# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TP_methylase PF00590.20 ORF116387 - 0.0041 17.1 0.3 0.0098 15.9 0.1 1.7 2 1 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases gpD PF02925.16 ORF116387 - 0.01 15.8 0.1 0.017 15.1 0.1 1.3 1 0 0 1 1 1 0 Bacteriophage scaffolding protein D MazG PF03819.17 ORF116387 - 0.089 13.0 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 MazG nucleotide pyrophosphohydrolase domain ASC PF00858.24 ORF115233 - 0.01 14.9 0.0 0.015 14.3 0.0 1.2 1 0 0 1 1 1 1 Amiloride-sensitive sodium channel DAO PF01266.24 ORF114188 - 6.7e-09 35.8 0.0 9.2e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase SBP_bac_5 PF00496.22 ORF114188 - 0.0082 15.1 0.0 0.012 14.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Pyr_redox_3 PF13738.6 ORF114188 - 0.037 13.3 0.1 0.055 12.7 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF114188 - 0.13 11.3 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A START PF01852.19 ORF11201 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF11201 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) DUF2867 PF11066.8 ORF110403 - 0.14 12.4 0.3 0.2 12.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2867) AAR2 PF05282.11 ORF110403 - 0.16 11.4 6.2 0.18 11.2 6.2 1.2 1 0 0 1 1 1 0 AAR2 protein ArAE_2_N PF10337.9 ORF110403 - 0.19 10.7 3.7 0.25 10.3 3.7 1.2 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal BUD22 PF09073.10 ORF110403 - 0.63 9.3 27.7 0.72 9.1 27.7 1.1 1 0 0 1 1 1 0 BUD22 Raftlin PF15250.6 ORF110403 - 1.3 7.7 10.3 1.7 7.3 10.3 1.2 1 0 0 1 1 1 0 Raftlin TFA2_Winged_2 PF18121.1 ORF105780 - 0.042 13.5 0.3 0.13 11.9 0.2 2.0 1 1 1 2 2 2 0 TFA2 Winged helix domain 2 CarbopepD_reg_2 PF13715.6 ORF105780 - 0.12 12.4 0.6 0.12 12.4 0.6 2.1 2 0 0 2 2 2 0 CarboxypepD_reg-like domain SHIPPO-rpt PF07004.12 ORF10232 - 4.8e-13 49.4 44.5 0.0033 18.3 0.0 6.8 6 2 0 6 6 6 5 Sperm-tail PG-rich repeat ECR1_N PF14382.6 ORF10232 - 0.005 16.6 0.6 1 9.2 0.0 3.9 5 0 0 5 5 5 1 Exosome complex exonuclease RRP4 N-terminal region Croc_4 PF17691.1 ORF10232 - 0.1 12.7 0.5 0.23 11.5 0.0 1.8 2 0 0 2 2 2 0 Contingent replication of cDNA 4 DUF2867 PF11066.8 ORF101838 - 0.14 12.4 0.3 0.2 12.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2867) AAR2 PF05282.11 ORF101838 - 0.16 11.4 6.2 0.18 11.2 6.2 1.2 1 0 0 1 1 1 0 AAR2 protein ArAE_2_N PF10337.9 ORF101838 - 0.19 10.7 3.7 0.25 10.3 3.7 1.2 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal BUD22 PF09073.10 ORF101838 - 0.63 9.3 27.7 0.72 9.1 27.7 1.1 1 0 0 1 1 1 0 BUD22 Raftlin PF15250.6 ORF101838 - 1.3 7.7 10.3 1.7 7.3 10.3 1.2 1 0 0 1 1 1 0 Raftlin Lactamase_B_2 PF12706.7 ORF101649 - 1.8e-09 37.4 0.0 4.3e-07 29.7 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain CLAMP PF14769.6 ORF1 - 0.0093 16.4 0.9 0.017 15.5 0.8 1.6 1 1 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 Herpes_UL52 PF03121.15 ORF1 - 0.17 11.8 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase CbiQ PF02361.16 NODE_32622_length_667_cov_31.966772_g25913_i0forward_frame_1 - 0.6 9.7 5.8 0.82 9.2 5.8 1.2 1 0 0 1 1 1 0 Cobalt transport protein C2 PF00168.30 NODE_32616_length_667_cov_93.637658_g25907_i0reverse_frame_1 - 3.5e-10 40.1 0.0 7.4e-10 39.0 0.0 1.6 1 0 0 1 1 1 1 C2 domain Cadherin_tail PF15974.5 NODE_32616_length_667_cov_93.637658_g25907_i0reverse_frame_1 - 0.49 10.7 7.5 0.53 10.6 5.0 2.0 2 0 0 2 2 2 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region BTD PF09270.10 NODE_32616_length_667_cov_93.637658_g25907_i0forward_frame_1 - 0.087 13.1 0.2 0.16 12.2 0.2 1.4 1 0 0 1 1 1 0 Beta-trefoil DNA-binding domain Sensor PF13796.6 NODE_32536_length_668_cov_1501.052133_g25838_i0forward_frame_1 - 0.013 15.5 0.0 0.025 14.6 0.0 1.4 1 0 0 1 1 1 0 Putative sensor TPR_12 PF13424.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 1.7e-08 34.6 4.0 7.6e-05 22.9 0.1 3.7 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 2e-08 33.7 1.0 0.2 11.9 0.0 4.4 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 5.6e-07 29.1 0.8 0.17 11.8 0.1 4.5 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 1.4e-06 27.9 0.6 1.3 9.0 0.1 5.0 5 1 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 1.1e-05 25.9 2.8 0.0034 17.9 0.5 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 2.1e-05 24.7 1.2 0.89 10.4 0.2 4.3 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 6.3e-05 22.6 1.2 0.0027 17.3 0.4 3.3 2 1 1 3 3 3 1 TPR repeat TPR_8 PF13181.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 7.2e-05 22.7 2.7 0.34 11.2 0.0 4.4 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 0.0007 20.2 3.8 0.002 18.7 0.2 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 0.0013 19.4 8.6 0.85 10.6 0.6 4.2 3 2 2 5 5 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 0.0044 17.1 1.8 1.1 9.5 0.0 3.1 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 0.0071 16.7 0.1 72 4.1 0.0 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 0.03 14.4 1.5 12 6.2 0.0 4.0 3 2 2 5 5 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_1 - 3.4 8.5 0.0 3.4 8.5 0.0 3.5 5 0 0 5 5 3 0 Tetratricopeptide repeat NADH_4Fe-4S PF10589.9 NODE_32511_length_669_cov_121.673502_g24006_i1forward_frame_1 - 0.075 13.1 1.6 0.13 12.3 1.6 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Sel1 PF08238.12 NODE_32476_length_670_cov_2.554331_g25790_i0reverse_frame_2 - 6.6e-18 64.8 6.2 3.1e-08 34.0 0.1 3.5 3 0 0 3 3 3 3 Sel1 repeat ZFYVE21_C PF16696.5 NODE_32474_length_670_cov_3.114961_g25788_i0reverse_frame_3 - 0.00082 19.2 0.4 0.0011 18.8 0.4 1.2 1 0 0 1 1 1 1 Zinc finger FYVE domain-containing protein 21 C-terminus DUF4830 PF16112.5 NODE_32474_length_670_cov_3.114961_g25788_i0forward_frame_3 - 0.02 15.3 0.0 0.043 14.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Aldolase_II PF00596.21 NODE_32455_length_670_cov_236.637795_g25769_i0reverse_frame_2 - 1.4e-07 31.6 0.0 2.7e-06 27.5 0.0 2.0 1 1 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain C4 PF01413.19 NODE_32455_length_670_cov_236.637795_g25769_i0forward_frame_2 - 0.042 14.2 0.2 0.086 13.2 0.2 1.6 1 0 0 1 1 1 0 C-terminal tandem repeated domain in type 4 procollagen DUF4357 PF14267.6 NODE_32455_length_670_cov_236.637795_g25769_i0forward_frame_2 - 4.6 7.3 5.4 23 5.0 0.3 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4357) DUF668 PF05003.12 NODE_32444_length_670_cov_552.233071_g25759_i0forward_frame_3 - 0.14 12.7 1.2 0.29 11.6 1.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF668) COX8 PF02285.15 NODE_32443_length_670_cov_710.121260_g25758_i0forward_frame_3 - 1.4 8.8 35.8 6.4 6.7 0.5 8.4 5 2 2 7 7 7 0 Cytochrome oxidase c subunit VIII AGTRAP PF06396.11 NODE_32431_length_671_cov_51.844340_g25749_i0reverse_frame_3 - 5.8 6.7 8.3 1.5 8.6 3.7 2.2 1 1 0 2 2 2 0 Angiotensin II, type I receptor-associated protein (AGTRAP) DEFB136 PF17333.2 NODE_32426_length_671_cov_76.682390_g25744_i0reverse_frame_2 - 0.12 12.4 4.0 0.23 11.4 4.0 1.5 1 0 0 1 1 1 0 Beta defensin 136 DUF5540 PF17694.1 NODE_32375_length_672_cov_123.773940_g25700_i0reverse_frame_3 - 0.94 10.0 10.0 9 6.9 3.9 2.5 2 1 0 2 2 2 0 Family of unknown function (DUF5540) ABC_tran PF00005.27 ORF99522 - 9.3e-18 65.1 0.0 1.2e-17 64.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF99522 - 0.0016 18.0 0.0 0.0016 17.9 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain BCA_ABC_TP_C PF12399.8 ORF99522 - 0.016 15.2 0.1 0.044 13.7 0.1 1.8 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter PHB_acc_N PF07879.11 ORF98787 - 0.012 15.7 2.0 0.12 12.5 0.1 2.4 2 1 0 2 2 2 0 PHB/PHA accumulation regulator DNA-binding domain Pkinase PF00069.25 ORF9867 - 1.4e-59 201.7 0.0 1.5e-59 201.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9867 - 4.3e-32 111.4 0.0 5.3e-32 111.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF9867 - 0.0026 17.1 0.0 0.0035 16.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like FUSC PF04632.12 ORF97405 - 2.4e-35 122.3 5.0 2.9e-35 122.0 5.0 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family MFS_1 PF07690.16 ORF95646 - 1.6e-16 60.2 22.6 2.1e-16 59.8 22.6 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF95646 - 0.013 14.4 16.5 0.017 14.0 16.5 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter Peptidase_M48_N PF16491.5 ORF95646 - 1.6 8.6 8.2 0.075 12.9 0.9 2.1 2 0 0 2 2 2 0 CAAX prenyl protease N-terminal, five membrane helices GST_N PF02798.20 ORF95571 - 1.1e-12 48.1 0.0 1.8e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF95571 - 1.2e-12 48.1 0.0 2.1e-12 47.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF95571 - 1e-07 32.0 0.1 1.9e-07 31.2 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF95571 - 1.1e-06 28.8 0.1 2e-06 27.9 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF95571 - 4.5e-06 26.9 0.0 8e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF95571 - 0.00042 20.3 0.0 0.0014 18.6 0.0 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain EF-hand_7 PF13499.6 ORF94073 - 7.2e-09 36.0 7.1 7.1e-06 26.4 0.7 2.6 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF94073 - 4.1e-07 29.1 9.3 0.0017 17.8 1.9 3.6 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF94073 - 5.5e-07 29.0 4.9 0.013 15.4 0.0 3.5 3 0 0 3 3 3 2 EF-hand domain RIIa PF02197.17 ORF94073 - 0.001 18.7 0.0 0.0027 17.4 0.0 1.8 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit Dpy-30 PF05186.13 ORF94073 - 0.013 15.2 0.0 0.029 14.0 0.0 1.5 1 0 0 1 1 1 0 Dpy-30 motif EF-hand_8 PF13833.6 ORF94073 - 0.049 13.5 1.9 0.43 10.5 0.6 2.6 2 1 0 2 2 2 0 EF-hand domain pair BTB PF00651.31 ORF94069 - 0.0016 18.6 0.0 0.0032 17.7 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain Aminotran_1_2 PF00155.21 ORF94069 - 0.0054 15.9 0.0 0.39 9.8 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class I and II CS PF04969.16 ORF93476 - 8.1e-12 46.0 0.2 1.7e-11 45.0 0.1 1.5 2 0 0 2 2 2 1 CS domain ApoO PF09769.9 ORF93476 - 0.017 15.1 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Apolipoprotein O LpqV PF17301.2 ORF92704 - 0.038 14.2 0.0 0.061 13.6 0.0 1.4 1 1 0 1 1 1 0 Putative lipoprotein LpqV PARP PF00644.20 ORF90789 - 7.9e-20 71.3 1.3 2.7e-17 63.0 1.3 2.6 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain KaiA PF07688.12 ORF8646 - 0.069 13.3 0.5 0.17 12.1 0.3 1.7 2 1 0 2 2 2 0 KaiA C-terminal domain NST1 PF13945.6 ORF84548 - 0.12 12.5 0.7 0.19 11.8 0.6 1.4 1 1 0 1 1 1 0 Salt tolerance down-regulator Gal11_ABD1 PF18535.1 ORF81311 - 0.16 12.0 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 Gal11 activator-binding domain (ABD1) Ribosomal_L16 PF00252.18 ORF80819 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e FdhD-NarQ PF02634.15 ORF80044 - 6.2e-66 222.5 0.0 7e-66 222.3 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family Coiled PF05710.12 ORF79712 - 0.024 15.4 4.7 0.032 15.1 4.7 1.1 1 0 0 1 1 1 0 Coiled coil DUF3319 PF11782.8 ORF79407 - 0.039 13.9 0.1 0.13 12.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3319) Macro PF01661.21 ORF77779 - 2.9e-10 40.2 0.0 6.5e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Macro domain CobW_C PF07683.14 ORF76895 - 3.2e-23 81.5 0.0 6.1e-23 80.6 0.0 1.5 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain Ribosomal_L16 PF00252.18 ORF75240 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e zinc_ribbon_4 PF13717.6 ORF68502 - 0.06 13.3 0.1 0.06 13.3 0.1 2.3 3 0 0 3 3 3 0 zinc-ribbon domain BLYB PF05289.11 ORF67478 - 0.011 16.0 1.1 0.032 14.5 0.4 2.1 2 0 0 2 2 2 0 Borrelia hemolysin accessory protein NUC153 PF08159.12 ORF67478 - 0.2 11.5 2.4 1.6 8.6 0.1 2.9 3 0 0 3 3 3 0 NUC153 domain LCAT PF02450.15 ORF66967 - 0.00028 20.2 0.1 0.0004 19.7 0.1 1.2 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase UQ_con PF00179.26 ORF66302 - 2.3e-15 56.5 0.1 3.9e-15 55.7 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF2754 PF10953.8 ORF66302 - 0.0012 19.0 0.2 0.23 11.7 0.0 2.6 3 0 0 3 3 3 2 Protein of unknown function (DUF2754) RWD PF05773.22 ORF66302 - 0.038 14.3 0.1 0.071 13.4 0.1 1.6 1 0 0 1 1 1 0 RWD domain Ion_trans PF00520.31 ORF66281 - 0.0035 16.6 0.2 0.0051 16.1 0.2 1.2 1 0 0 1 1 1 1 Ion transport protein Pkinase PF00069.25 ORF63023 - 1.9e-35 122.5 0.0 2.1e-35 122.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63023 - 7e-35 120.6 0.0 7.6e-35 120.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF63023 - 0.0012 18.3 0.0 0.0018 17.7 0.0 1.3 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF63023 - 0.002 18.1 0.0 0.0031 17.5 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF63023 - 0.003 16.4 0.0 0.0042 15.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF63023 - 0.0088 15.4 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EcKinase PF02958.20 ORF63023 - 0.022 14.1 0.0 0.031 13.6 0.0 1.2 1 0 0 1 1 1 0 Ecdysteroid kinase RIO1 PF01163.22 ORF63023 - 0.17 11.4 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Lge1 PF11488.8 ORF62369 - 0.036 14.2 1.1 0.072 13.3 1.1 1.5 1 0 0 1 1 1 0 Transcriptional regulatory protein LGE1 Gcd10p PF04189.13 ORF62369 - 0.074 12.2 2.5 0.11 11.6 2.5 1.2 1 0 0 1 1 1 0 Gcd10p family FdhD-NarQ PF02634.15 ORF605 - 6.2e-66 222.5 0.0 7e-66 222.3 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family Peptidase_M24_C PF16188.5 ORF5920 - 0.17 12.0 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 Flavodoxin_1 PF00258.25 ORF58545 - 1e-23 84.1 1.3 1.4e-23 83.7 1.3 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 ORF58545 - 0.00027 20.7 0.0 0.00047 19.9 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.7 ORF58545 - 0.0017 18.6 0.0 0.0026 18.0 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain AhpC-TSA PF00578.21 ORF58545 - 0.0047 16.8 0.0 0.012 15.5 0.0 1.6 2 0 0 2 2 2 1 AhpC/TSA family Flavodoxin_NdrI PF07972.11 ORF58545 - 0.024 14.8 0.0 0.036 14.3 0.0 1.2 1 0 0 1 1 1 0 NrdI Flavodoxin like Spherulin4 PF12138.8 ORF58545 - 0.1 12.2 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Spherulation-specific family 4 FMN_red PF03358.15 ORF58545 - 0.15 11.8 0.1 11 5.7 0.0 3.1 1 1 2 3 3 3 0 NADPH-dependent FMN reductase Yeast_MT PF11403.8 ORF57546 - 0.01 16.4 1.3 0.022 15.3 1.3 1.5 1 0 0 1 1 1 0 Yeast metallothionein SBP_bac_8 PF13416.6 ORF5619 - 9.2e-18 65.0 2.7 1.3e-17 64.5 2.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 ORF5619 - 9.8e-18 65.2 5.2 1.4e-17 64.6 5.2 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein HD PF01966.22 ORF55796 - 4.3e-11 43.1 0.0 7.8e-11 42.3 0.0 1.5 1 0 0 1 1 1 1 HD domain Pkinase PF00069.25 ORF55147 - 9.7e-09 35.0 0.0 1.5e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain GST_C_3 PF14497.6 ORF54381 - 8.8e-14 51.5 0.0 1.4e-13 50.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF54381 - 2e-09 37.6 0.0 3.2e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF54381 - 1.8e-06 28.1 0.0 2.9e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF54381 - 7.2e-05 22.5 0.0 0.00015 21.5 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF54381 - 0.0019 18.6 0.0 0.004 17.5 0.0 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF54381 - 0.0083 16.1 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain EamA PF00892.20 ORF5203 - 3.7e-08 33.6 18.2 2e-05 24.8 1.1 2.4 2 1 0 2 2 2 2 EamA-like transporter family Cortexin PF11057.8 ORF51686 - 0.65 9.9 2.7 1.8 8.4 0.7 2.2 2 0 0 2 2 2 0 Cortexin of kidney Flavodoxin_1 PF00258.25 ORF47138 - 1e-23 84.1 1.3 1.4e-23 83.7 1.3 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 ORF47138 - 0.00027 20.7 0.0 0.00047 19.9 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.7 ORF47138 - 0.0017 18.6 0.0 0.0026 18.0 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain AhpC-TSA PF00578.21 ORF47138 - 0.0047 16.8 0.0 0.012 15.5 0.0 1.6 2 0 0 2 2 2 1 AhpC/TSA family Flavodoxin_NdrI PF07972.11 ORF47138 - 0.024 14.8 0.0 0.036 14.3 0.0 1.2 1 0 0 1 1 1 0 NrdI Flavodoxin like Spherulin4 PF12138.8 ORF47138 - 0.1 12.2 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Spherulation-specific family 4 FMN_red PF03358.15 ORF47138 - 0.15 11.8 0.1 11 5.7 0.0 3.1 1 1 2 3 3 3 0 NADPH-dependent FMN reductase Endonuclease_5 PF04493.14 ORF46591 - 1.9e-73 246.3 0.0 2.2e-73 246.1 0.0 1.0 1 0 0 1 1 1 1 Endonuclease V UvrC_HhH_N PF08459.11 ORF46591 - 0.025 14.5 0.0 0.065 13.1 0.0 1.6 1 1 0 1 1 1 0 UvrC Helix-hairpin-helix N-terminal DUF1580 PF07618.11 ORF46591 - 0.1 12.3 0.1 0.22 11.2 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1580) Minor_capsid_3 PF12691.7 ORF46258 - 0.032 14.6 1.0 2.2 8.7 0.1 2.3 2 0 0 2 2 2 0 Minor capsid protein from bacteriophage Thioredoxin_4 PF13462.6 ORF45109 - 6.1e-10 39.5 0.0 8.8e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF45109 - 0.00016 21.5 0.1 0.6 9.9 0.0 2.1 2 0 0 2 2 2 2 DSBA-like thioredoxin domain DUF3563 PF12086.8 ORF45109 - 0.1 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3563) RRP7 PF12923.7 ORF44332 - 8.1e-10 38.9 18.4 3.3e-09 36.9 18.4 2.0 1 1 0 1 1 1 1 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain Ribosomal_L16 PF00252.18 ORF43782 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e EamA PF00892.20 ORF42625 - 3.7e-08 33.6 18.2 2e-05 24.8 1.1 2.4 2 1 0 2 2 2 2 EamA-like transporter family TPR_12 PF13424.6 ORF42214 - 6.2e-11 42.4 6.1 3.5e-06 27.2 0.0 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF42214 - 2.1e-10 40.1 0.8 8.3e-05 22.3 0.1 5.0 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF42214 - 3.8e-08 32.8 12.4 0.018 14.9 0.1 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF42214 - 1.9e-07 30.6 2.2 0.0014 18.5 0.0 4.1 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF42214 - 6.6e-05 22.7 10.3 0.21 11.8 0.1 4.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF42214 - 0.00019 21.4 8.1 0.42 10.9 0.0 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF42214 - 0.0022 18.4 0.6 3.5 8.2 0.0 3.5 2 1 0 2 2 2 1 Tetratricopeptide repeat Vps39_1 PF10366.9 ORF42214 - 0.031 14.6 4.2 2.5 8.4 0.1 3.3 2 1 1 3 3 3 0 Vacuolar sorting protein 39 domain 1 PPR PF01535.20 ORF42214 - 0.045 14.0 1.7 9.1 6.8 0.1 3.3 2 1 0 3 3 3 0 PPR repeat TPR_14 PF13428.6 ORF42214 - 0.046 14.6 0.0 81 4.4 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF42214 - 0.067 13.6 0.1 2.9 8.5 0.1 3.3 3 1 1 4 4 4 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF42214 - 0.15 12.3 3.7 0.69 10.2 0.5 3.0 2 1 1 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 XhlA PF10779.9 ORF42214 - 0.41 10.9 4.5 1.9 8.8 1.1 2.7 2 1 0 2 2 2 0 Haemolysin XhlA GLTP PF08718.11 ORF42214 - 7.3 6.9 9.8 19 5.5 0.3 3.2 1 1 1 2 2 2 0 Glycolipid transfer protein (GLTP) SBP_bac_8 PF13416.6 ORF42101 - 9.2e-18 65.0 2.7 1.3e-17 64.5 2.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 ORF42101 - 9.8e-18 65.2 5.2 1.4e-17 64.6 5.2 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Pkinase PF00069.25 ORF41435 - 4.1e-28 98.5 0.0 4.5e-28 98.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41435 - 1.3e-18 67.3 0.0 1.3e-18 67.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF41435 - 1.1e-06 27.7 0.0 1.7e-06 27.1 0.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF41435 - 0.0004 20.4 0.0 0.0021 18.1 0.0 2.0 2 1 0 3 3 3 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF41435 - 0.0067 15.5 0.5 0.0089 15.0 0.5 1.1 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase TelA PF05816.11 ORF41435 - 0.085 11.9 0.1 0.12 11.4 0.1 1.2 1 0 0 1 1 1 0 Toxic anion resistance protein (TelA) Haspin_kinase PF12330.8 ORF41435 - 0.09 11.7 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Topoisom_bac PF01131.20 ORF41435 - 0.11 11.5 0.1 0.15 11.0 0.1 1.1 1 0 0 1 1 1 0 DNA topoisomerase Ribosomal_L16 PF00252.18 ORF41186 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e GST_C_3 PF14497.6 ORF38703 - 8.8e-14 51.5 0.0 1.4e-13 50.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF38703 - 2e-09 37.6 0.0 3.2e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF38703 - 1.8e-06 28.1 0.0 2.9e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF38703 - 7.2e-05 22.5 0.0 0.00015 21.5 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF38703 - 0.0018 18.7 0.0 0.004 17.5 0.0 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF38703 - 0.0084 16.1 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Flavodoxin_1 PF00258.25 ORF37193 - 1.4e-23 83.7 1.3 2.2e-23 83.0 1.3 1.3 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 ORF37193 - 0.00019 21.2 0.0 0.00035 20.3 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.7 ORF37193 - 0.0013 19.0 0.0 0.0023 18.2 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin domain AhpC-TSA PF00578.21 ORF37193 - 0.0027 17.6 0.0 0.0053 16.7 0.0 1.5 1 0 0 1 1 1 1 AhpC/TSA family Flavodoxin_NdrI PF07972.11 ORF37193 - 0.058 13.6 0.0 0.091 12.9 0.0 1.3 1 0 0 1 1 1 0 NrdI Flavodoxin like FMN_red PF03358.15 ORF37193 - 0.14 11.9 0.1 8.8 6.1 0.0 3.1 1 1 2 3 3 3 0 NADPH-dependent FMN reductase TrbC PF04956.13 ORF37193 - 0.18 12.0 0.4 0.36 11.1 0.4 1.5 1 0 0 1 1 1 0 TrbC/VIRB2 family Ribosomal_L16 PF00252.18 ORF37082 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Methyltransf_3 PF01596.17 ORF36546 - 1.6e-59 200.7 0.5 1.9e-59 200.4 0.5 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF36546 - 2.2e-10 41.5 0.0 3.1e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF36546 - 0.005 16.6 0.0 0.0083 15.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF36546 - 0.022 14.5 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Flavi_NS2A PF01005.19 ORF34468 - 0.11 12.7 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Flavivirus non-structural protein NS2A Porphobil_deam PF01379.20 ORF32378 - 8.4e-36 123.4 0.0 1.1e-35 123.0 0.0 1.2 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 ORF32378 - 1.3e-17 64.0 0.1 2.3e-17 63.1 0.1 1.5 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain Ribosomal_L16 PF00252.18 ORF2981 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e FYVE_2 PF02318.16 ORF294 - 0.34 11.1 7.2 0.065 13.5 2.7 2.0 2 0 0 2 2 2 0 FYVE-type zinc finger zf-HIT PF04438.16 ORF294 - 1.3 8.9 7.7 9.1 6.3 4.7 2.7 2 0 0 2 2 2 0 HIT zinc finger DsrC PF04358.13 ORF28324 - 0.59 10.7 5.9 1.1 9.8 5.0 1.8 1 1 1 2 2 2 0 DsrC like protein DUF3367 PF11847.8 ORF27709 - 0.28 9.0 0.0 0.34 8.7 0.0 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase MORN PF02493.20 ORF27438 - 3.6e-25 86.3 25.9 4.1e-06 26.4 1.7 6.0 5 1 0 5 5 5 5 MORN repeat Ribonuc_red_sm PF00268.21 ORF26263 - 6.9e-73 245.5 0.4 8.6e-73 245.2 0.4 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain GST_C_3 PF14497.6 ORF25176 - 8.8e-14 51.5 0.0 1.4e-13 50.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF25176 - 2e-09 37.6 0.0 3.2e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF25176 - 1.8e-06 28.1 0.0 2.9e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF25176 - 7.2e-05 22.5 0.0 0.00015 21.5 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF25176 - 0.0019 18.6 0.0 0.004 17.5 0.0 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF25176 - 0.0083 16.1 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Sod_Fe_C PF02777.18 ORF24403 - 3.3e-33 113.9 0.5 3.3e-33 113.9 0.5 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 ORF24403 - 3e-29 101.3 0.3 8.7e-29 99.8 0.2 1.8 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Kelch_1 PF01344.25 ORF24059 - 2.3e-11 43.1 7.6 0.1 12.2 0.1 5.0 5 1 0 5 5 5 4 Kelch motif Kelch_6 PF13964.6 ORF24059 - 8.7e-10 38.5 0.6 0.091 13.1 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_4 PF13418.6 ORF24059 - 0.00019 21.3 0.0 3.5 7.7 0.0 3.8 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF24059 - 0.017 15.4 0.0 0.61 10.4 0.0 3.0 4 0 0 4 4 4 0 Galactose oxidase, central domain DUF287 PF03384.14 ORF24059 - 0.094 13.1 0.0 2.8 8.4 0.0 2.4 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 Kelch_2 PF07646.15 ORF24059 - 0.11 12.5 4.1 8.3 6.6 0.1 3.7 4 2 0 4 4 4 0 Kelch motif Ribosomal_L16 PF00252.18 ORF20609 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e TPR_2 PF07719.17 ORF20131 - 8.8e-23 78.5 15.2 6.8e-06 25.8 0.7 5.7 6 0 0 6 6 5 4 Tetratricopeptide repeat TPR_12 PF13424.6 ORF20131 - 8.6e-22 77.2 5.2 5e-06 26.7 0.3 4.6 4 1 0 4 4 4 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF20131 - 1.8e-20 71.9 20.5 1.2e-06 28.0 0.0 5.6 6 0 0 6 6 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF20131 - 1.3e-17 64.0 2.9 1.6e-08 34.9 0.5 4.2 3 1 2 5 5 4 4 Tetratricopeptide repeat TPR_8 PF13181.6 ORF20131 - 4e-14 51.6 17.0 0.0019 18.3 0.3 5.5 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_17 PF13431.6 ORF20131 - 2.7e-13 49.3 9.1 0.019 15.3 0.0 6.1 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF20131 - 3.3e-13 48.6 1.9 0.15 12.2 0.0 5.4 5 0 0 5 5 5 4 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF20131 - 1.3e-12 47.8 11.7 1.6e-07 31.4 0.2 3.2 1 1 2 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 ORF20131 - 3.5e-12 46.1 4.7 0.00016 22.1 0.1 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF20131 - 4.2e-10 40.1 0.0 1.5e-06 28.7 0.0 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF20131 - 1e-08 35.3 0.0 0.17 12.8 0.0 5.2 3 2 2 5 5 5 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF20131 - 7.3e-08 32.0 0.8 0.33 10.9 0.0 5.4 5 0 0 5 5 5 1 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF20131 - 5.4e-06 26.0 2.8 0.002 17.6 0.2 2.9 1 1 2 3 3 3 3 Coatomer epsilon subunit Fis1_TPR_C PF14853.6 ORF20131 - 1.3e-05 25.2 12.9 0.0089 16.1 0.2 4.4 4 1 1 5 5 4 2 Fis1 C-terminal tetratricopeptide repeat TPR_9 PF13371.6 ORF20131 - 5.5e-05 23.2 0.0 0.01 16.0 0.0 2.8 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_20 PF14561.6 ORF20131 - 8.1e-05 22.9 0.0 1.5 9.2 0.0 3.3 1 1 1 3 3 3 2 Tetratricopeptide repeat TPR_15 PF13429.6 ORF20131 - 0.00033 20.0 0.1 0.0017 17.6 0.0 2.0 1 1 1 2 2 2 1 Tetratricopeptide repeat ChAPs PF09295.10 ORF20131 - 0.00085 18.4 0.3 0.3 10.1 0.2 2.1 1 1 1 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) TPR_3 PF07720.12 ORF20131 - 0.00093 19.1 10.8 0.63 10.1 0.5 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat Seryl_tRNA_N PF02403.22 ORF20131 - 0.0011 19.2 0.0 0.0029 17.8 0.0 1.7 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain RPN7 PF10602.9 ORF20131 - 0.0011 18.7 2.4 0.004 16.9 0.3 2.4 1 1 1 2 2 2 1 26S proteasome subunit RPN7 DUF4919 PF16266.5 ORF20131 - 0.0074 16.2 7.6 0.11 12.4 0.2 3.1 2 1 2 4 4 4 1 Domain of unknown function (DUF4919) MIT PF04212.18 ORF20131 - 0.01 15.9 14.3 3.4 7.8 0.5 5.0 4 2 1 5 5 5 0 MIT (microtubule interacting and transport) domain TPR_11 PF13414.6 ORF20131 - 0.016 14.8 18.6 1.2 8.9 2.7 5.2 4 2 1 5 5 5 0 TPR repeat Sel1 PF08238.12 ORF20131 - 0.023 15.4 6.4 3.9 8.3 0.1 4.5 5 0 0 5 5 4 0 Sel1 repeat PPR_long PF17177.4 ORF20131 - 0.033 13.6 1.1 0.049 13.0 0.2 1.9 2 0 0 2 2 2 0 Pentacotripeptide-repeat region of PRORP SPO22 PF08631.10 ORF20131 - 0.044 13.3 8.8 1.8 8.0 1.9 3.7 2 1 1 3 3 3 0 Meiosis protein SPO22/ZIP4 like SNAP PF14938.6 ORF20131 - 0.066 12.6 11.1 0.15 11.4 1.4 3.3 2 2 1 3 3 3 0 Soluble NSF attachment protein, SNAP PPR PF01535.20 ORF20131 - 0.15 12.4 4.9 34 5.0 0.1 4.3 4 0 0 4 4 3 0 PPR repeat ANAPC5 PF12862.7 ORF20131 - 0.41 10.7 6.4 0.74 9.9 2.5 3.0 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 5 DUF5113 PF17140.4 ORF20131 - 0.6 9.9 9.7 0.28 11.0 0.5 3.6 2 1 3 5 5 5 0 Domain of unknown function (DUF5113) Gemini_AL1_M PF08283.11 ORF18377 - 0.014 15.5 0.7 0.025 14.7 0.1 1.7 2 0 0 2 2 2 0 Geminivirus rep protein central domain Cytochrom_C1 PF02167.15 ORF18377 - 0.017 14.9 0.2 0.99 9.1 0.0 2.6 3 0 0 3 3 3 0 Cytochrome C1 family Recep_L_domain PF01030.24 ORF18377 - 0.064 13.4 2.8 0.19 11.9 0.4 2.5 1 1 0 2 2 2 0 Receptor L domain Rho_Binding PF08912.11 ORF17454 - 0.3 11.9 6.1 5 8.0 0.0 3.3 2 1 2 4 4 4 0 Rho Binding zf-Paramyx-P PF13008.7 ORF16881 - 0.66 9.5 5.4 15 5.2 0.2 2.9 2 1 1 3 3 3 0 Zinc-binding domain of Paramyxoviridae V protein DUF5134 PF17197.4 ORF152997 - 0.0002 21.3 0.9 0.0003 20.7 0.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5134) Cad PF03596.13 ORF152997 - 0.049 13.5 0.1 0.049 13.5 0.1 1.6 2 0 0 2 2 2 0 Cadmium resistance transporter Shisa PF13908.6 ORF152997 - 0.1 12.9 0.5 0.1 12.9 0.5 2.0 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator MetOD1 PF18546.1 ORF152811 - 0.11 12.4 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 Metanogen output domain 1 Peroxin-22 PF12827.7 ORF151526 - 0.24 11.3 0.0 0.39 10.7 0.0 1.3 1 0 0 1 1 1 0 Peroxisomal biogenesis protein family ERGIC_N PF13850.6 ORF15108 - 0.063 13.6 1.7 0.1 13.0 0.2 2.2 3 0 0 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Pkinase PF00069.25 ORF151004 - 3.1e-44 151.3 0.0 3.6e-44 151.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF151004 - 4.6e-25 88.4 0.0 5.9e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF151004 - 0.0019 18.2 0.0 0.0023 17.9 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF151004 - 0.018 14.4 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF151004 - 0.018 14.6 0.0 0.025 14.2 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Pox_ser-thr_kin PF05445.11 ORF151004 - 0.075 12.0 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Syndecan PF01034.20 ORF150660 - 3.1e-06 27.0 0.1 5.7e-06 26.1 0.1 1.4 1 0 0 1 1 1 1 Syndecan domain Glycophorin_A PF01102.18 ORF150660 - 6.8e-05 23.1 0.1 0.00011 22.4 0.1 1.4 1 0 0 1 1 1 1 Glycophorin A DUF4690 PF15756.5 ORF150660 - 0.00011 22.7 0.4 0.00024 21.6 0.4 1.5 1 0 0 1 1 1 1 Small Novel Rich in Cartilage TMEM154 PF15102.6 ORF150660 - 0.00079 19.4 0.1 0.0013 18.7 0.1 1.3 1 0 0 1 1 1 1 TMEM154 protein family Podoplanin PF05808.11 ORF150660 - 0.0015 18.6 0.2 0.0021 18.2 0.2 1.3 1 0 0 1 1 1 1 Podoplanin Rax2 PF12768.7 ORF150660 - 0.0021 17.6 6.3 0.026 14.0 6.3 2.0 1 1 0 1 1 1 1 Cortical protein marker for cell polarity Mid2 PF04478.12 ORF150660 - 0.0031 17.4 0.5 0.0052 16.6 0.5 1.5 1 0 0 1 1 1 1 Mid2 like cell wall stress sensor EphA2_TM PF14575.6 ORF150660 - 0.0057 17.5 0.8 0.0057 17.5 0.8 1.7 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain Herpes_gE PF02480.16 ORF150660 - 0.006 15.4 0.0 0.0081 15.0 0.0 1.2 1 0 0 1 1 1 1 Alphaherpesvirus glycoprotein E CYYR1 PF10873.8 ORF150660 - 0.01 16.3 0.2 0.018 15.5 0.2 1.4 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 Shisa PF13908.6 ORF150660 - 0.024 14.9 0.6 0.044 14.0 0.6 1.5 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator OppC_N PF12911.7 ORF150660 - 0.031 14.3 1.1 0.067 13.2 0.7 1.8 2 0 0 2 2 1 0 N-terminal TM domain of oligopeptide transport permease C Insulin_TMD PF17870.1 ORF150660 - 0.045 13.8 2.0 0.12 12.5 2.0 1.7 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Amnionless PF14828.6 ORF150660 - 0.079 11.8 0.0 0.098 11.5 0.0 1.2 1 0 0 1 1 1 0 Amnionless DAG1 PF05454.11 ORF150660 - 0.1 12.0 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) RCR PF12273.8 ORF150660 - 0.24 12.1 0.3 0.24 12.1 0.3 1.8 2 0 0 2 2 2 0 Chitin synthesis regulation, resistance to Congo red PTP_tm PF18861.1 ORF150660 - 2.2 8.2 7.5 2.9 7.8 6.6 1.6 1 1 0 1 1 1 0 Transmembrane domain of protein tyrosine phosphatase, receptor type J CRF PF00473.17 ORF150325 - 0.16 12.1 0.6 0.49 10.5 0.4 1.9 2 0 0 2 2 2 0 Corticotropin-releasing factor family FlgH PF02107.16 ORF148899 - 2e-54 183.7 1.0 2.3e-54 183.5 1.0 1.0 1 0 0 1 1 1 1 Flagellar L-ring protein Ribonuc_red_sm PF00268.21 ORF148775 - 6.9e-73 245.5 0.4 8.6e-73 245.2 0.4 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain PP2C PF00481.21 ORF147996 - 5.2e-52 177.0 0.0 6.5e-52 176.7 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF147996 - 0.051 13.2 0.0 0.076 12.6 0.0 1.4 1 1 0 1 1 1 0 Protein phosphatase 2C Antimicrobial10 PF08105.11 ORF147996 - 0.14 12.2 0.8 0.26 11.4 0.1 1.8 2 0 0 2 2 2 0 Metchnikowin family Peptidase_M24_C PF16188.5 ORF145756 - 0.17 12.0 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 Ribosomal_L16 PF00252.18 ORF143375 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e LCE PF14672.6 ORF143183 - 2.8 8.6 10.1 8.6 7.0 10.1 1.9 1 0 0 1 1 1 0 Late cornified envelope Pkinase PF00069.25 ORF140387 - 8.6e-54 182.7 0.2 1.2e-53 182.2 0.2 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF140387 - 9.8e-25 87.3 0.0 1.3e-24 86.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF140387 - 6.3e-06 25.7 0.1 8.6e-06 25.2 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF140387 - 5.8e-05 23.1 0.0 0.00039 20.4 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF140387 - 0.0035 17.0 2.7 0.0056 16.3 0.6 2.1 1 1 0 2 2 2 1 Choline/ethanolamine kinase YcxB PF14317.6 ORF140387 - 0.017 14.8 2.1 0.056 13.2 1.6 2.0 2 0 0 2 2 2 0 YcxB-like protein CBFD_NFYB_HMF PF00808.23 ORF137682 - 1.4e-21 76.5 0.8 2.6e-21 75.7 0.8 1.5 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF137682 - 2.2e-16 60.4 0.7 4.6e-16 59.4 0.7 1.6 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-X PF09415.10 ORF137682 - 0.052 13.9 0.1 0.13 12.6 0.1 1.7 1 0 0 1 1 1 0 CENP-S associating Centromere protein X PEX11 PF05648.14 ORF137496 - 3.2e-47 160.9 1.7 3.5e-47 160.7 1.7 1.0 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) Peroxin-22 PF12827.7 ORF137496 - 0.066 13.1 0.1 0.094 12.7 0.1 1.4 1 0 0 1 1 1 0 Peroxisomal biogenesis protein family PheRS_DBD2 PF18554.1 ORF137496 - 2.2 8.4 7.7 1.1 9.3 0.2 3.3 2 1 1 3 3 3 0 PheRS DNA binding domain 2 GLTP PF08718.11 ORF136912 - 7.5e-16 58.7 0.1 1e-15 58.3 0.1 1.2 1 0 0 1 1 1 1 Glycolipid transfer protein (GLTP) HEPN_LA2681 PF18733.1 ORF134863 - 0.0014 17.9 0.2 0.0022 17.3 0.2 1.2 1 0 0 1 1 1 1 LA2681-like HEPN ERGIC_N PF13850.6 ORF134863 - 0.03 14.6 0.6 0.083 13.2 0.2 2.0 3 0 0 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ChitinaseA_N PF08329.10 ORF134863 - 0.17 11.5 0.1 1.1 8.9 0.0 2.0 2 0 0 2 2 2 0 Chitinase A, N-terminal domain Peptidase_M18 PF02127.15 ORF134074 - 0.036 12.9 0.3 0.036 12.9 0.3 1.7 2 0 0 2 2 2 0 Aminopeptidase I zinc metalloprotease (M18) O-antigen_lig PF13425.6 ORF133983 - 1 8.1 6.1 1.4 7.6 6.1 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein UL45 PF05473.12 ORF132163 - 0.22 11.2 0.0 0.32 10.6 0.0 1.2 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like GTP1_OBG PF01018.22 ORF129938 - 0.74 9.4 3.9 1.9 8.1 0.2 2.4 2 0 0 2 2 2 0 GTP1/OBG Ribosomal_L16 PF00252.18 ORF128414 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Ribosomal_L16 PF00252.18 ORF127194 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e IMS PF00817.20 ORF126749 - 8.6e-28 97.2 0.1 1.6e-27 96.3 0.0 1.5 2 0 0 2 2 2 1 impB/mucB/samB family Imm71 PF15602.6 ORF126749 - 0.014 15.4 0.4 0.023 14.7 0.4 1.3 1 0 0 1 1 1 0 Immunity protein 71 Gly_kinase PF02595.15 ORF122520 - 1.8e-45 155.5 3.8 2.1e-45 155.3 3.8 1.0 1 0 0 1 1 1 1 Glycerate kinase family Corona_NS8 PF12093.8 ORF121998 - 0.079 13.5 0.1 0.14 12.7 0.1 1.3 1 0 0 1 1 1 0 Coronavirus NS8 protein Pkinase PF00069.25 ORF12111 - 1e-43 149.6 0.0 1.2e-43 149.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF12111 - 1.2e-24 87.0 0.0 1.6e-24 86.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF12111 - 0.002 18.1 0.0 0.0025 17.8 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF12111 - 0.018 14.4 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF12111 - 0.018 14.6 0.0 0.025 14.2 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Pox_ser-thr_kin PF05445.11 ORF12111 - 0.075 12.0 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Glyco_transf_52 PF07922.11 ORF117615 - 0.055 12.7 3.1 0.089 12.1 3.1 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 52 HTH_28 PF13518.6 ORF117615 - 0.062 13.4 0.1 0.099 12.8 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Macro PF01661.21 ORF117188 - 2.9e-10 40.2 0.0 6.5e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Macro domain Methyltransf_23 PF13489.6 ORF115917 - 6.7e-22 78.1 0.0 8e-22 77.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF115917 - 1.7e-17 63.9 0.0 2.7e-17 63.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF115917 - 4.5e-13 49.8 0.0 8e-13 49.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF115917 - 7e-12 45.4 0.0 9.3e-12 45.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF115917 - 3.5e-11 43.7 0.0 6.9e-11 42.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF115917 - 3.7e-05 23.2 0.0 4.8e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase TehB PF03848.14 ORF115917 - 0.00012 21.6 0.0 0.00017 21.1 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB NodS PF05401.11 ORF115917 - 0.0008 19.1 0.0 0.001 18.8 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 ORF115917 - 0.0023 16.9 0.0 0.0036 16.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Pox_MCEL PF03291.16 ORF115917 - 0.0051 16.0 0.0 0.021 14.0 0.0 1.9 1 1 0 1 1 1 1 mRNA capping enzyme PrmA PF06325.13 ORF115917 - 0.0099 15.3 0.0 0.02 14.3 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 ORF115917 - 0.09 12.8 0.0 0.19 11.7 0.0 1.6 1 1 1 2 2 2 0 Methyltransferase domain Ribosomal_L16 PF00252.18 ORF115591 - 5.7e-34 117.0 0.2 7.5e-34 116.6 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e PseudoU_synth_2 PF00849.22 ORF115346 - 9.3e-23 81.1 0.0 1.4e-22 80.5 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF2859 PF11072.8 ORF115346 - 0.19 11.5 0.0 0.31 10.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) Gemini_AL1_M PF08283.11 ORF111152 - 0.014 15.5 0.7 0.025 14.7 0.1 1.7 2 0 0 2 2 2 0 Geminivirus rep protein central domain Cytochrom_C1 PF02167.15 ORF111152 - 0.017 14.9 0.2 0.99 9.1 0.0 2.6 3 0 0 3 3 3 0 Cytochrome C1 family Recep_L_domain PF01030.24 ORF111152 - 0.064 13.4 2.8 0.19 11.9 0.4 2.5 1 1 0 2 2 2 0 Receptor L domain DUF3807 PF12720.7 ORF110802 - 7.6 6.8 27.3 0.99 9.7 18.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3807) Fumerase PF05681.14 ORF107159 - 6.6e-05 22.5 0.1 0.00012 21.6 0.1 1.4 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) HypA PF01155.19 ORF107159 - 0.015 15.3 3.2 0.015 15.3 3.2 1.8 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Sod_Fe_C PF02777.18 ORF104364 - 3.3e-33 113.9 0.5 3.3e-33 113.9 0.5 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 ORF104364 - 3e-29 101.3 0.3 8.7e-29 99.8 0.2 1.8 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Ribonuc_red_sm PF00268.21 ORF103259 - 6.9e-73 245.5 0.4 8.6e-73 245.2 0.4 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Ion_trans_2 PF07885.16 ORF101678 - 2.5e-10 40.2 5.2 2.5e-10 40.2 5.2 1.6 2 0 0 2 2 2 1 Ion channel Ion_trans PF00520.31 ORF101678 - 1.6e-05 24.3 3.9 3e-05 23.4 3.9 1.4 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 ORF101678 - 0.0015 18.3 1.4 0.0026 17.6 1.4 1.4 1 1 0 1 1 1 1 Ligand-gated ion channel TRI5 PF06330.11 NODE_32761_length_664_cov_2.553259_g26038_i0forward_frame_1 - 0.14 11.0 0.1 0.2 10.5 0.1 1.2 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) zf-DNA_Pol PF08996.10 NODE_32710_length_664_cov_1634.015898_g25988_i0reverse_frame_1 - 3.3 7.4 6.6 0.13 12.0 0.9 1.6 2 0 0 2 2 2 0 DNA Polymerase alpha zinc finger DUF1534 PF07551.11 NODE_32671_length_666_cov_2.015848_g25953_i0reverse_frame_1 - 0.059 13.1 1.2 0.16 11.8 1.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1534) DEAD_assoc PF08494.11 NODE_32671_length_666_cov_2.015848_g25953_i0forward_frame_1 - 1.2e-45 155.7 0.0 2.3e-45 154.7 0.0 1.5 1 0 0 1 1 1 1 DEAD/H associated Requiem_N PF14051.6 NODE_32644_length_666_cov_245.309033_g25932_i0reverse_frame_1 - 0.0091 16.2 0.8 0.07 13.3 0.0 2.2 2 0 0 2 2 2 1 N-terminal domain of DPF2/REQ. MT PF12777.7 NODE_32622_length_667_cov_31.966772_g25913_i0reverse_frame_3 - 7.8e-05 21.8 0.2 9.9e-05 21.5 0.2 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Ribosomal_S8 PF00410.19 NODE_32622_length_667_cov_31.966772_g25913_i0reverse_frame_3 - 0.00074 19.5 0.1 0.0014 18.6 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein S8 DUF4476 PF14771.6 NODE_32622_length_667_cov_31.966772_g25913_i0reverse_frame_3 - 0.06 13.6 0.8 0.23 11.8 0.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4476) DUF4079 PF13301.6 NODE_32622_length_667_cov_31.966772_g25913_i0forward_frame_3 - 0.024 14.8 0.2 0.043 14.0 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) Thioredoxin_4 PF13462.6 NODE_32621_length_667_cov_60.466772_g25912_i0forward_frame_3 - 0.029 14.5 0.4 0.039 14.1 0.4 1.2 1 0 0 1 1 1 0 Thioredoxin BRE1 PF08647.11 NODE_32621_length_667_cov_60.466772_g25912_i0forward_frame_2 - 0.34 11.0 12.8 0.77 9.9 7.7 2.7 2 1 1 3 3 3 0 BRE1 E3 ubiquitin ligase H2TH PF06831.14 NODE_32602_length_667_cov_212.449367_g25893_i0reverse_frame_3 - 0.064 13.2 0.1 0.14 12.1 0.1 1.6 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain GYF PF02213.16 NODE_32565_length_668_cov_94.723539_g25862_i0reverse_frame_3 - 7.7e-13 47.9 0.1 1.8e-12 46.7 0.1 1.7 1 0 0 1 1 1 1 GYF domain GYF_2 PF14237.6 NODE_32565_length_668_cov_94.723539_g25862_i0reverse_frame_3 - 0.00042 20.1 0.1 0.00091 19.0 0.1 1.6 1 0 0 1 1 1 1 GYF domain 2 CAP_N PF01213.19 NODE_32553_length_668_cov_159.826224_g25850_i0reverse_frame_2 - 0.00046 19.8 2.8 0.00066 19.3 2.8 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal MSA_2 PF00985.17 NODE_32539_length_668_cov_534.515008_g24784_i1forward_frame_3 - 5.6 7.3 4.7 3.3 8.0 1.4 1.9 2 0 0 2 2 2 0 Merozoite Surface Antigen 2 (MSA-2) family PsbH PF00737.20 NODE_32536_length_668_cov_1501.052133_g25838_i0reverse_frame_3 - 1.2e-06 28.1 0.4 2.7e-06 27.0 0.4 1.6 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Sdh_cyt PF01127.22 NODE_32536_length_668_cov_1501.052133_g25838_i0reverse_frame_3 - 0.046 13.8 0.1 0.24 11.5 0.0 1.9 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Ycf70 PF17382.2 NODE_32536_length_668_cov_1501.052133_g25838_i0reverse_frame_3 - 0.15 12.5 0.0 0.32 11.4 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized Ycf70-like C1_1 PF00130.22 NODE_32529_length_669_cov_3.529968_g25833_i0reverse_frame_3 - 0.0038 17.1 4.9 0.007 16.2 4.9 1.4 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) CBP_BcsG PF11658.8 NODE_32529_length_669_cov_3.529968_g25833_i0forward_frame_2 - 6.5e-87 292.1 0.0 7.2e-87 291.9 0.0 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG TNFR_c6 PF00020.18 NODE_32514_length_669_cov_104.888013_g24687_i1reverse_frame_3 - 0.099 13.1 3.5 0.42 11.1 3.5 2.1 1 0 0 1 1 1 0 TNFR/NGFR cysteine-rich region SVWC PF15430.6 NODE_32514_length_669_cov_104.888013_g24687_i1forward_frame_2 - 2 8.7 5.3 1.3 9.4 0.4 2.7 3 1 0 3 3 3 0 Single domain von Willebrand factor type C Actin PF00022.19 NODE_32511_length_669_cov_121.673502_g24006_i1reverse_frame_3 - 1.4e-09 37.1 0.0 4.9e-05 22.1 0.0 2.1 2 0 0 2 2 2 2 Actin Glutaredoxin PF00462.24 NODE_32494_length_669_cov_395.862776_g25803_i0reverse_frame_2 - 3.8e-11 43.0 0.2 8.5e-11 41.9 0.2 1.6 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 NODE_32494_length_669_cov_395.862776_g25803_i0reverse_frame_2 - 0.037 14.5 0.4 0.093 13.2 0.4 1.6 1 1 0 1 1 1 0 Thioredoxin-like domain DUF836 PF05768.14 NODE_32494_length_669_cov_395.862776_g25803_i0reverse_frame_2 - 0.086 13.3 0.1 0.14 12.5 0.1 1.4 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks100.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks100.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks100.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks100.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 17:59:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_1 PF07690.16 NODE_32490_length_669_cov_583.258675_g22905_i2reverse_frame_3 - 0.016 14.1 12.5 0.022 13.7 12.5 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily Transket_pyr PF02779.24 NODE_32490_length_669_cov_583.258675_g22905_i2reverse_frame_3 - 0.057 13.1 0.9 0.094 12.4 0.9 1.3 1 0 0 1 1 1 0 Transketolase, pyrimidine binding domain Toxin_16 PF07945.11 NODE_32490_length_669_cov_583.258675_g22905_i2reverse_frame_3 - 0.2 11.6 4.9 0.62 10.0 0.9 2.4 2 0 0 2 2 2 0 Janus-atracotoxin RGS_DHEX PF18148.1 ORF98121 - 0.1 12.7 0.4 0.34 11.0 0.2 1.9 2 0 0 2 2 2 0 Regulator of G-protein signalling DHEX domain RNase_3_N PF18497.1 ORF98121 - 0.15 12.3 2.2 3.1 8.1 0.3 2.4 2 0 0 2 2 2 0 Ribonuclease III N-terminal domain Ank_2 PF12796.7 ORF97797 - 2e-56 188.5 6.0 1.4e-18 67.2 0.1 3.7 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF97797 - 1.4e-28 98.9 12.1 9.2e-09 35.7 0.0 5.0 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF97797 - 3.1e-28 97.5 5.1 3.5e-09 36.7 0.0 5.7 1 1 5 6 6 6 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF97797 - 3.4e-28 94.6 1.3 0.00075 19.8 0.0 7.1 6 1 1 7 7 7 7 Ankyrin repeat Ank PF00023.30 ORF97797 - 2.8e-27 93.9 10.1 2.2e-05 24.7 0.0 7.1 6 1 1 7 7 7 6 Ankyrin repeat VWA_3_C PF18571.1 ORF97797 - 0.0016 18.2 5.2 4.9 7.1 0.0 4.3 4 0 0 4 4 4 2 von Willebrand factor type A C-terminal domain TAL_FSA PF00923.19 ORF97080 - 8.7e-44 150.0 0.1 1.7e-43 149.0 0.1 1.4 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase Protoglobin PF11563.8 ORF96495 - 0.01 15.7 0.1 0.23 11.3 0.0 2.3 2 0 0 2 2 2 0 Protoglobin BLOC1S3 PF15753.5 ORF96495 - 0.11 12.6 1.9 0.34 11.0 1.9 1.9 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 Tricorn_C1 PF14684.6 ORF96495 - 0.15 12.1 0.0 1.2 9.2 0.0 2.4 2 1 0 2 2 2 0 Tricorn protease C1 domain UPF0016 PF01169.19 ORF94176 - 1.4e-17 63.7 20.3 8.6e-17 61.2 5.2 2.5 3 0 0 3 3 3 2 Uncharacterized protein family UPF0016 MFS_1 PF07690.16 ORF94176 - 0.014 14.4 13.6 0.047 12.6 13.6 1.7 1 1 0 1 1 1 0 Major Facilitator Superfamily MRAP PF15183.6 ORF94176 - 0.019 14.9 4.1 0.045 13.7 0.1 2.7 3 0 0 3 3 3 0 Melanocortin-2 receptor accessory protein family SPACA7 PF15307.6 ORF94176 - 0.07 13.4 1.9 0.12 12.7 1.9 1.3 1 0 0 1 1 1 0 Sperm acrosome-associated protein 7 Flu_B_M2 PF04772.12 ORF94176 - 0.14 12.4 1.3 7.4 6.9 0.1 2.5 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) TRIQK PF15168.6 ORF94176 - 0.94 9.4 2.8 13 5.8 0.1 2.7 3 0 0 3 3 3 0 Triple QxxK/R motif-containing protein family FeoB_C PF07664.12 ORF94176 - 5.4 6.8 7.2 19 5.0 0.2 2.9 2 2 0 2 2 2 0 Ferrous iron transport protein B C terminus Polysacc_deac_2 PF04748.13 ORF92919 - 2e-46 157.9 0.1 2.4e-46 157.6 0.1 1.1 1 0 0 1 1 1 1 Divergent polysaccharide deacetylase GST_N_3 PF13417.6 ORF91369 - 3e-11 43.6 0.1 6.4e-11 42.5 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF91369 - 3.5e-11 43.3 0.0 7.3e-11 42.3 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF91369 - 3.2e-10 40.1 0.0 4.7e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF91369 - 2.1e-09 37.5 0.0 3.5e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF91369 - 7.3e-06 26.2 0.0 1.1e-05 25.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF91369 - 1.9e-05 24.6 0.0 3e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF91369 - 0.0085 15.9 0.2 0.015 15.1 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Rh5 PF18515.1 ORF86478 - 0.0047 16.3 4.5 0.0069 15.7 4.5 1.3 1 0 0 1 1 1 1 Rh5 coiled-coil domain WXG100 PF06013.12 ORF86478 - 0.15 12.4 0.0 11 6.4 0.0 2.3 2 0 0 2 2 2 0 Proteins of 100 residues with WXG BRAP2 PF07576.12 ORF86478 - 0.29 11.4 2.4 0.32 11.2 0.9 1.9 2 0 0 2 2 2 0 BRCA1-associated protein 2 Rad10 PF03834.14 ORF81741 - 1.7e-24 86.1 0.2 2.6e-24 85.4 0.2 1.3 1 0 0 1 1 1 1 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) HHH_5 PF14520.6 ORF81741 - 5.4e-05 23.7 0.0 0.0001 22.8 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 ORF81741 - 0.0038 17.3 0.0 0.0066 16.5 0.0 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 ORF81741 - 0.0057 17.2 1.5 0.023 15.3 0.3 2.4 1 1 1 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_4 PF14490.6 ORF81741 - 0.096 12.7 0.4 1.3 9.0 0.0 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix containing domain PAT1 PF09770.9 ORF81042 - 4.7 5.4 9.0 5.7 5.1 9.0 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 SF-assemblin PF06705.11 ORF79565 - 1.2e-20 73.9 12.3 1.5e-20 73.6 12.3 1.0 1 0 0 1 1 1 1 SF-assemblin/beta giardin DUF842 PF05811.13 ORF79565 - 0.0095 15.6 1.2 0.0095 15.6 1.2 2.2 1 1 0 2 2 2 1 Eukaryotic protein of unknown function (DUF842) Dict-STAT-coil PF09267.10 ORF79565 - 0.018 15.4 0.3 0.018 15.4 0.3 2.5 3 0 0 3 3 3 0 Dictyostelium STAT, coiled coil Gal11_ABD1 PF18535.1 ORF79565 - 0.037 14.1 0.0 0.11 12.6 0.0 1.8 1 0 0 1 1 1 0 Gal11 activator-binding domain (ABD1) Ada3 PF10198.9 ORF79565 - 0.04 14.0 8.1 0.3 11.2 4.6 3.1 1 1 1 2 2 2 0 Histone acetyltransferases subunit 3 Snapin_Pallidin PF14712.6 ORF79565 - 0.081 13.3 10.3 0.34 11.3 3.2 3.3 2 2 1 3 3 3 0 Snapin/Pallidin Phage_Mu_Gam PF07352.12 ORF79565 - 0.18 11.7 10.6 0.1 12.5 2.9 2.3 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein Baculo_PEP_C PF04513.12 ORF79565 - 0.32 11.0 1.8 15 5.6 0.1 2.5 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3584 PF12128.8 ORF79565 - 0.45 8.0 21.0 0.58 7.6 21.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) WAC_Acf1_DNA_bd PF10537.9 ORF79565 - 0.69 10.5 5.3 0.24 11.9 1.4 2.1 1 1 1 2 2 2 0 ATP-utilising chromatin assembly and remodelling N-terminal DUF2405 PF10293.9 ORF79565 - 0.82 9.6 5.8 0.1 12.5 1.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF2405) LCIB_C_CA PF18599.1 ORF79565 - 1.7 7.9 6.8 8.3 5.6 1.6 2.1 1 1 0 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases DUF724 PF05266.14 ORF79565 - 2.3 8.0 12.9 4.5 7.1 5.9 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF724) Fib_alpha PF08702.10 ORF79565 - 3 8.0 11.0 78 3.4 10.4 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family FUSC PF04632.12 ORF79565 - 3.4 6.1 13.0 5.3 5.5 13.0 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF4407 PF14362.6 ORF79565 - 5.5 6.3 18.8 0.36 10.1 3.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF2570 PF10828.8 ORF79565 - 6.7 6.6 10.9 1.9 8.3 3.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) COG2 PF06148.11 ORF79565 - 8.1 6.5 13.8 14 5.8 2.7 2.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DNA_pol3_beta PF00712.19 ORF76750 - 0.16 12.1 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase III beta subunit, N-terminal domain GST_N_3 PF13417.6 ORF75396 - 3.5e-18 65.8 0.0 6.5e-18 64.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF75396 - 2.1e-15 56.8 0.1 4e-15 55.9 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF75396 - 3.7e-13 49.6 0.0 6.8e-13 48.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF75396 - 8.5e-08 32.3 0.0 1.6e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF75396 - 7.5e-05 22.9 0.0 0.00014 22.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF75396 - 0.0044 17.0 0.0 0.0082 16.2 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF75396 - 0.0078 16.4 0.0 0.026 14.8 0.0 1.9 2 0 0 2 2 2 1 Glutaredoxin GST_N_4 PF17172.4 ORF75396 - 0.019 15.7 0.0 0.19 12.5 0.0 2.3 1 1 0 1 1 1 0 Glutathione S-transferase N-terminal domain OrfB_Zn_ribbon PF07282.11 ORF7487 - 0.82 9.6 9.3 0.38 10.7 0.2 2.5 2 0 0 2 2 2 0 Putative transposase DNA-binding domain AhpC-TSA PF00578.21 ORF72230 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF72230 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF72230 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF72230 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC Herpes_UL32 PF06070.11 ORF70898 - 0.015 13.1 0.1 0.018 12.8 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 PAT1 PF09770.9 ORF70198 - 4.7 5.4 9.0 5.7 5.1 9.0 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 TMEM18 PF14770.6 ORF70015 - 0.014 15.4 1.2 0.014 15.4 1.2 2.0 1 1 1 2 2 2 0 Transmembrane protein 18 DUF3481 PF11980.8 ORF68202 - 0.0071 16.0 0.0 0.014 15.1 0.0 1.5 1 0 0 1 1 1 1 C-terminal domain of neuropilin glycoprotein TRP PF06011.12 ORF68202 - 0.013 14.3 3.6 0.016 14.0 3.6 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel LRR19-TM PF15176.6 ORF68202 - 0.026 14.5 0.6 0.085 12.9 0.1 2.2 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain DUF2976 PF11190.8 ORF68202 - 0.056 13.2 0.5 0.22 11.4 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) DUF4834 PF16118.5 ORF68202 - 0.1 13.6 0.0 0.1 13.6 0.0 2.7 2 2 1 3 3 3 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 ORF68202 - 0.29 12.0 1.2 1 10.2 0.0 2.5 3 1 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain ER_lumen_recept PF00810.18 ORF68202 - 0.59 11.0 7.5 0.65 10.8 6.1 1.6 1 1 1 2 2 2 0 ER lumen protein retaining receptor DUF4407 PF14362.6 ORF65821 - 0.0013 18.2 3.1 0.0015 17.9 3.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) FapA PF03961.13 ORF65821 - 0.002 16.8 9.4 0.0025 16.5 9.4 1.3 1 0 0 1 1 1 1 Flagellar Assembly Protein A BLOC1_2 PF10046.9 ORF65821 - 0.032 14.5 10.9 0.16 12.3 2.0 2.8 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Snapin_Pallidin PF14712.6 ORF65821 - 0.055 13.9 7.9 0.72 10.3 0.1 2.9 2 1 1 3 3 3 0 Snapin/Pallidin Fib_alpha PF08702.10 ORF65821 - 0.11 12.7 15.4 1.6 8.9 0.6 2.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF3086 PF11285.8 ORF65821 - 0.18 10.8 2.5 0.22 10.6 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) MscS_porin PF12795.7 ORF65821 - 0.32 10.5 4.1 7.8 6.0 0.6 2.9 2 1 1 3 3 3 0 Mechanosensitive ion channel porin domain YkyA PF10368.9 ORF65821 - 0.53 9.9 16.8 1.1 8.9 1.8 2.5 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein Nup54 PF13874.6 ORF65821 - 0.76 9.9 5.5 1.3 9.1 4.0 2.2 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 DASH_Dam1 PF08653.10 ORF65821 - 1.4 8.8 5.0 1.5 8.7 0.0 3.1 3 1 1 4 4 4 0 DASH complex subunit Dam1 MCPsignal PF00015.21 ORF65821 - 1.5 8.6 7.4 9.3 6.0 1.8 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Spc7 PF08317.11 ORF65821 - 1.7 7.5 14.2 3.4 6.5 14.2 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein CpxA_peri PF16527.5 ORF65821 - 1.7 9.0 5.3 1.1 9.7 1.3 2.0 2 0 0 2 2 2 0 Two-component sensor protein CpxA, periplasmic domain V_ATPase_I PF01496.19 ORF65821 - 2.1 6.2 10.9 3.7 5.3 10.4 1.5 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family HSBP1 PF06825.12 ORF65821 - 2.1 8.3 8.4 13 5.7 1.1 3.2 2 1 1 3 3 3 0 Heat shock factor binding protein 1 DUF948 PF06103.11 ORF65821 - 2.3 8.6 8.0 38 4.6 5.2 2.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Occludin_ELL PF07303.13 ORF65821 - 3.9 8.2 9.3 37 5.1 1.4 3.5 1 1 2 3 3 3 0 Occludin homology domain DUF2203 PF09969.9 ORF65821 - 4.3 8.1 6.6 10 6.9 4.7 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) ALMT PF11744.8 ORF65821 - 4.8 5.9 10.4 6.1 5.5 10.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter NPV_P10 PF05531.12 ORF65821 - 6.9 7.2 8.8 11 6.6 0.4 3.2 2 1 1 4 4 4 0 Nucleopolyhedrovirus P10 protein RAMP4 PF06624.12 ORF64780 - 0.059 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Ran_BP1 PF00638.18 ORF6387 - 1.3e-32 112.6 2.6 2.2e-32 111.9 2.6 1.3 1 0 0 1 1 1 1 RanBP1 domain STAT_bind PF02864.15 ORF6387 - 0.094 13.3 0.6 0.19 12.3 0.1 1.7 1 1 1 2 2 2 0 STAT protein, DNA binding domain Imm58 PF15581.6 ORF61560 - 2.6 8.2 9.1 0.57 10.3 1.4 2.5 2 1 0 2 2 2 0 Immunity protein 58 Ras PF00071.22 ORF58316 - 2.5e-64 215.8 1.3 3.1e-64 215.5 1.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF58316 - 9.3e-35 119.5 0.4 9.3e-35 119.5 0.4 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF58316 - 1.3e-16 60.6 0.2 1.6e-16 60.2 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF58316 - 3.7e-07 29.7 0.3 4.5e-07 29.5 0.3 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF58316 - 1.8e-05 24.7 0.9 0.15 12.0 0.1 2.4 1 1 1 2 2 2 2 RsgA GTPase MMR_HSR1 PF01926.23 ORF58316 - 4.2e-05 23.6 0.1 7.8e-05 22.7 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF58316 - 0.00019 21.0 0.3 0.00033 20.3 0.3 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF58316 - 0.0053 16.3 0.3 0.06 12.9 0.3 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_7 PF12775.7 ORF58316 - 0.0092 15.5 0.0 0.017 14.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_5 PF07728.14 ORF58316 - 0.016 15.2 0.0 0.06 13.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) RuvX PF03652.15 ORF58316 - 0.017 15.5 0.2 0.026 14.9 0.2 1.2 1 0 0 1 1 1 0 Holliday junction resolvase AAA_22 PF13401.6 ORF58316 - 0.03 14.6 0.0 0.057 13.7 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 ORF58316 - 0.049 13.8 0.0 0.25 11.5 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF58316 - 0.057 13.2 0.0 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain TniB PF05621.11 ORF58316 - 0.069 12.6 0.0 0.42 10.0 0.0 2.0 2 0 0 2 2 2 0 Bacterial TniB protein AAA PF00004.29 ORF58316 - 0.099 13.1 0.0 1.7 9.0 0.0 2.3 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF58316 - 0.13 12.6 0.0 0.19 12.1 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Herpes_capsid PF06112.11 ORF55223 - 0.021 14.9 13.1 0.029 14.4 12.6 1.4 1 1 0 1 1 1 0 Gammaherpesvirus capsid protein Methyltransf_3 PF01596.17 ORF54192 - 7.6e-67 224.6 0.2 9.1e-67 224.3 0.2 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF54192 - 2.1e-12 48.0 0.0 3.3e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF54192 - 1.1e-06 28.5 0.0 1.7e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF54192 - 0.00029 21.5 0.0 0.00051 20.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF54192 - 0.0035 17.1 0.0 0.0049 16.6 0.0 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 ORF54192 - 0.014 14.7 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 ORF54192 - 0.023 14.0 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF54192 - 0.058 13.3 0.0 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF54192 - 0.072 13.8 0.0 0.18 12.5 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Colipase_C PF02740.14 ORF53130 - 0.51 10.6 3.5 3.5 7.9 0.7 2.4 2 0 0 2 2 2 0 Colipase, C-terminal domain CDH PF02611.15 ORF51500 - 4.5e-78 261.9 0.1 5.2e-73 245.4 0.0 2.0 1 1 1 2 2 2 2 CDP-diacylglycerol pyrophosphatase DUF4156 PF13698.6 ORF48969 - 0.075 13.4 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) Methyltransf_23 PF13489.6 ORF48003 - 1.9e-15 57.1 0.0 2.4e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF48003 - 2.5e-14 53.7 0.0 6.1e-14 52.5 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF48003 - 9e-11 42.3 0.0 1.5e-10 41.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF48003 - 2.5e-09 37.1 0.0 3.1e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF48003 - 6.9e-09 36.4 0.0 1.1e-08 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF48003 - 5.8e-05 22.5 0.0 7.5e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family NodS PF05401.11 ORF48003 - 0.0019 17.8 0.0 0.0025 17.5 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Sterol_MT_C PF08498.10 ORF48003 - 0.03 14.7 0.0 0.41 11.0 0.0 2.2 2 0 0 2 2 2 0 Sterol methyltransferase C-terminal Methyltransf_3 PF01596.17 ORF47458 - 5.1e-66 221.9 0.1 6.1e-66 221.6 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF47458 - 3.4e-11 44.1 0.0 4.9e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF47458 - 1.2e-06 28.4 0.0 2.9e-06 27.1 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 ORF47458 - 0.00057 19.7 0.0 0.00086 19.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 ORF47458 - 0.0033 18.1 0.0 0.0071 17.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF47458 - 0.012 15.0 0.0 0.016 14.6 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF47458 - 0.031 13.6 0.0 0.04 13.2 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Gliadin PF13016.6 ORF46195 - 0.099 13.1 1.0 0.2 12.1 1.0 1.5 1 0 0 1 1 1 0 Cys-rich Gliadin N-terminal AhpC-TSA PF00578.21 ORF44639 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF44639 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF44639 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF44639 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC PspA_IM30 PF04012.12 ORF44017 - 9.8e-48 162.6 32.6 1.2e-47 162.4 32.6 1.0 1 0 0 1 1 1 1 PspA/IM30 family DUF3367 PF11847.8 ORF44017 - 0.44 8.3 3.1 0.35 8.7 0.6 1.7 1 1 0 2 2 2 0 Alpha-(1->3)-arabinofuranosyltransferase rRNA_proc-arch PF13234.6 ORF44017 - 1.6 8.6 12.5 0.077 12.9 0.9 2.4 1 1 0 2 2 2 0 rRNA-processing arch domain FlaC_arch PF05377.11 ORF44017 - 4.1 7.9 7.4 5.4 7.5 0.3 3.6 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) CHDCT2 PF08074.11 ORF44017 - 5.4 7.2 16.5 2.3 8.4 3.4 2.5 1 1 1 2 2 2 0 CHDCT2 (NUC038) domain zf-DNA_Pol PF08996.10 ORF43792 - 5.9 6.6 8.8 0.88 9.3 3.6 1.9 1 1 1 2 2 2 0 DNA Polymerase alpha zinc finger Ank_4 PF13637.6 ORF43573 - 2.8e-06 27.8 0.0 7.8e-06 26.3 0.0 1.9 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF43573 - 1.6e-05 25.1 0.0 6e-05 23.2 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF43573 - 1.8e-05 25.2 0.0 3.1e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF43573 - 0.0004 20.6 0.0 0.0023 18.3 0.0 2.3 3 0 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF43573 - 0.00091 19.6 0.1 0.0043 17.4 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat GalP_UDP_tr_C PF02744.17 ORF43573 - 0.13 12.0 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain CCDC73 PF15818.5 ORF43573 - 0.13 10.1 0.3 0.17 9.7 0.3 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 73 family FHIPEP PF00771.20 ORF42636 - 6.2e-45 153.9 0.3 6.9e-45 153.7 0.3 1.0 1 0 0 1 1 1 1 FHIPEP family AhpC-TSA PF00578.21 ORF42157 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF42157 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF42157 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF42157 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC Tubulin PF00091.25 ORF4181 - 2.1e-30 106.4 0.1 3.4e-30 105.7 0.1 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 ORF4181 - 0.0011 18.7 0.0 0.0015 18.2 0.0 1.2 1 0 0 1 1 1 1 Tubulin domain BRO1 PF03097.18 ORF38972 - 0.22 10.3 0.0 0.29 9.9 0.0 1.1 1 0 0 1 1 1 0 BRO1-like domain MyTH4 PF00784.17 ORF38972 - 0.81 10.2 14.3 3.6 8.1 0.2 3.9 3 1 1 4 4 4 0 MyTH4 domain DUF5408 PF17402.2 ORF38972 - 3 7.8 5.1 27 4.7 0.0 3.4 4 0 0 4 4 4 0 Family of unknown function (DUF5408) Pepdidase_M14_N PF18027.1 ORF32820 - 1.2e-10 41.7 0.1 1.7e-10 41.2 0.1 1.2 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain zf-LITAF-like PF10601.9 ORF32333 - 4.4e-09 36.5 15.0 5.6e-09 36.1 15.0 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Ion_trans PF00520.31 ORF31173 - 1.1e-27 96.9 9.3 1.6e-27 96.3 9.3 1.2 1 0 0 1 1 1 1 Ion transport protein Holin_SPP1 PF04688.13 ORF31173 - 0.12 12.5 1.9 0.35 11.1 0.1 2.3 3 0 0 3 3 3 0 SPP1 phage holin AhpC-TSA PF00578.21 ORF30537 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF30537 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF30537 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF30537 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC Coiled PF05710.12 ORF30506 - 0.14 13.0 0.0 0.25 12.2 0.0 1.4 1 0 0 1 1 1 0 Coiled coil Inhibitor_I68 PF10468.9 ORF27033 - 0.056 13.8 7.2 0.51 10.8 0.3 2.3 2 0 0 2 2 2 0 Carboxypeptidase inhibitor I68 MORN PF02493.20 ORF20023 - 2.1e-28 96.5 56.4 1.7e-07 30.7 1.8 6.6 7 0 0 7 7 7 6 MORN repeat Tudor_2 PF18104.1 ORF20023 - 0.0012 18.5 2.7 2.2 8.0 0.0 3.7 3 0 0 3 3 3 2 Jumonji domain-containing protein 2A Tudor domain DUF3048_C PF17479.2 ORF20023 - 0.047 14.1 7.5 0.44 10.9 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain FAA_hydrolase PF01557.18 ORF19927 - 5e-34 117.9 0.0 6.4e-34 117.5 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Tox-HNH-HHH PF15637.6 ORF151061 - 0.06 13.5 5.7 0.21 11.8 0.6 3.2 2 1 2 4 4 4 0 HNH/Endo VII superfamily nuclease toxin with a HHH motif Amidase PF01425.21 ORF151061 - 4 6.3 7.6 5.7 5.8 7.6 1.2 1 0 0 1 1 1 0 Amidase Cys_rich_FGFR PF00839.17 ORF149338 - 0.049 13.8 0.4 0.087 13.0 0.4 1.4 1 0 0 1 1 1 0 Cysteine rich repeat Sin3_corepress PF08295.12 ORF149338 - 0.071 13.2 3.7 0.15 12.1 2.1 2.0 1 1 1 2 2 2 0 Sin3 family co-repressor AZUL PF16558.5 ORF148190 - 0.15 12.3 0.4 0.15 12.3 0.4 2.0 2 0 0 2 2 2 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A Fungal_lectin_2 PF18647.1 ORF148028 - 1.4 9.4 7.0 0.27 11.7 2.4 2.0 2 0 0 2 2 2 0 Alpha-galactosyl-binding fungal lectin Rab_eff_C PF04698.12 ORF147395 - 0.086 11.1 0.3 0.11 10.7 0.3 1.1 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus Mob1_phocein PF03637.17 ORF145823 - 5.5e-35 120.9 0.3 7.4e-35 120.5 0.3 1.1 1 0 0 1 1 1 1 Mob1/phocein family ParD_like PF11903.8 ORF145128 - 0.064 13.3 0.1 0.12 12.5 0.1 1.5 1 0 0 1 1 1 0 ParD-like antitoxin of type II bacterial toxin-antitoxin system MORN PF02493.20 ORF144572 - 0.034 14.0 11.3 0.74 9.8 0.8 4.9 4 1 0 4 4 4 0 MORN repeat Jacalin PF01419.17 ORF140290 - 0.00026 21.0 0.0 0.00043 20.2 0.0 1.4 1 0 0 1 1 1 1 Jacalin-like lectin domain Bacteroid_pep PF14406.6 ORF138941 - 0.023 15.0 0.5 0.023 15.0 0.5 2.8 3 0 0 3 3 3 0 Ribosomally synthesized peptide in Bacteroidetes Med9 PF07544.13 ORF138941 - 0.17 12.0 8.0 0.49 10.5 8.0 1.8 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 60KD_IMP PF02096.20 ORF138941 - 0.51 10.2 2.2 0.87 9.5 2.2 1.3 1 0 0 1 1 1 0 60Kd inner membrane protein PAP_central PF04928.17 ORF138941 - 1.1 8.2 4.8 2 7.3 4.8 1.4 1 0 0 1 1 1 0 Poly(A) polymerase central domain LAGLIDADG_3 PF14528.6 ORF136488 - 0.0093 16.3 0.5 0.022 15.0 0.5 1.7 1 1 0 1 1 1 1 LAGLIDADG-like domain Response_reg PF00072.24 ORF134978 - 1.1e-25 90.0 0.0 1.4e-25 89.6 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 ORF134978 - 5.8e-21 74.4 0.3 1.8e-20 72.8 0.0 2.0 2 1 1 3 3 3 1 Transcriptional regulatory protein, C terminal NgoMIV_restric PF09015.10 ORF134978 - 0.046 12.8 0.0 0.068 12.3 0.0 1.2 1 0 0 1 1 1 0 NgoMIV restriction enzyme AhpC-TSA PF00578.21 ORF129773 - 2.3e-36 124.5 0.0 3.7e-36 123.8 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF129773 - 2e-21 76.2 0.0 2.9e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF129773 - 3.2e-12 46.1 0.3 6.2e-12 45.2 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF129773 - 0.021 14.7 0.1 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC Ribosomal_L9_N PF01281.19 ORF127212 - 9.4e-06 25.1 0.0 2.1e-05 24.0 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain Ribosomal_L9_C PF03948.14 ORF127212 - 0.049 14.1 0.0 0.2 12.1 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L9, C-terminal domain DUF599 PF04654.12 ORF122639 - 1.9 7.8 15.8 1.1 8.6 3.0 3.1 1 1 2 3 3 3 0 Protein of unknown function, DUF599 Atx10homo_assoc PF09759.9 ORF116773 - 9.9e-10 38.3 0.1 2e-09 37.4 0.1 1.5 1 0 0 1 1 1 1 Spinocerebellar ataxia type 10 protein domain Methyltransf_12 PF08242.12 ORF116773 - 0.017 15.9 0.2 0.063 14.0 0.1 2.0 2 0 0 2 2 2 0 Methyltransferase domain Yip1 PF04893.17 ORF116538 - 2.4e-16 59.9 15.1 3.8e-16 59.3 14.9 1.3 1 1 0 1 1 1 1 Yip1 domain Methyltransf_3 PF01596.17 ORF115244 - 5.1e-66 221.9 0.1 6.1e-66 221.6 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF115244 - 3.4e-11 44.1 0.0 4.9e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF115244 - 1.2e-06 28.4 0.0 2.9e-06 27.1 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 ORF115244 - 0.00057 19.7 0.0 0.00086 19.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 ORF115244 - 0.0033 18.1 0.0 0.0071 17.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF115244 - 0.012 15.0 0.0 0.016 14.6 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF115244 - 0.031 13.6 0.0 0.04 13.2 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MAPEG PF01124.18 ORF109165 - 4.3e-13 49.3 0.3 6e-13 48.8 0.3 1.3 1 0 0 1 1 1 1 MAPEG family LysR_substrate PF03466.20 ORF109042 - 5.1e-32 110.9 0.0 6.1e-32 110.7 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain PBP_like PF12727.7 ORF109042 - 0.085 12.0 0.0 0.15 11.2 0.0 1.4 1 0 0 1 1 1 0 PBP superfamily domain TMEM71 PF15121.6 ORF108029 - 0.0072 16.0 0.4 0.011 15.4 0.4 1.3 1 0 0 1 1 1 1 TMEM71 protein family BPD_transp_1 PF00528.22 ORF107743 - 3.8e-13 49.6 10.5 3.8e-13 49.6 10.5 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Claudin_2 PF13903.6 ORF107743 - 2.2 8.0 7.5 0.33 10.7 2.2 2.0 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction EF-hand_1 PF00036.32 ORF106751 - 1.4e-09 36.8 0.9 1.6e-05 24.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF106751 - 4.5e-08 33.4 0.1 6.7e-08 32.9 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF106751 - 4.8e-07 29.2 0.6 0.00061 19.5 0.1 2.5 1 1 1 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF106751 - 0.00069 19.9 0.0 0.001 19.3 0.0 1.2 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF106751 - 0.0011 18.7 0.3 0.0053 16.6 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF106751 - 0.0011 18.3 0.1 0.0011 18.3 0.1 2.7 3 0 0 3 3 3 1 EF hand FAP PF07174.11 ORF106751 - 0.023 14.1 4.8 0.031 13.7 4.8 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DUF5605 PF18310.1 ORF105599 - 0.049 13.5 0.3 0.14 12.0 0.3 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF5605) Asp PF00026.23 ORF104784 - 8.2e-10 38.6 0.0 1.1e-09 38.2 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF104784 - 0.00075 19.3 0.0 0.0012 18.6 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Shisa PF13908.6 ORF104784 - 0.0036 17.6 0.0 0.0054 17.0 0.0 1.2 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Tweety PF04906.13 ORF104784 - 0.18 10.4 0.9 0.25 10.0 0.9 1.1 1 0 0 1 1 1 0 Tweety DUF2208 PF09973.9 ORF102908 - 0.023 14.3 0.3 1.6 8.3 0.2 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2208) YMF19 PF02326.15 ORF102908 - 0.12 13.2 0.8 8.1 7.3 0.6 2.3 2 0 0 2 2 2 0 Plant ATP synthase F0 oligo_HPY PF08352.12 ORF102584 - 1.2e-18 67.4 0.2 1.2e-18 67.4 0.2 1.7 2 0 0 2 2 2 1 Oligopeptide/dipeptide transporter, C-terminal region ABC_tran PF00005.27 ORF102584 - 0.00035 21.1 0.1 0.00057 20.4 0.1 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF102584 - 0.0012 18.7 0.3 0.0016 18.3 0.3 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Herpes_ori_bp PF02399.15 ORF102584 - 0.065 11.3 0.1 0.084 10.9 0.1 1.1 1 0 0 1 1 1 0 Origin of replication binding protein Methyltransf_3 PF01596.17 ORF102549 - 1.7e-66 223.4 0.2 2.1e-66 223.1 0.2 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF102549 - 2e-12 48.1 0.0 3.1e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF102549 - 1e-06 28.7 0.0 1.7e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF102549 - 0.00017 22.2 0.0 0.00034 21.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF102549 - 0.00082 19.2 0.0 0.0012 18.7 0.0 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 ORF102549 - 0.023 14.0 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF102549 - 0.026 13.8 0.0 0.035 13.4 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Gln-synt_C PF00120.24 ORF102549 - 0.034 13.2 0.0 0.066 12.2 0.0 1.3 2 0 0 2 2 2 0 Glutamine synthetase, catalytic domain Methyltransf_18 PF12847.7 ORF102549 - 0.054 13.4 0.0 0.26 11.2 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF102549 - 0.084 13.5 0.0 0.23 12.1 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain SRI PF08236.11 ORF10191 - 0.075 13.2 7.3 0.086 13.0 0.1 2.5 2 0 0 2 2 2 0 SRI (Set2 Rpb1 interacting) domain DUF4441 PF14536.6 ORF10191 - 3.8 7.7 15.3 69 3.7 15.3 2.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) EutQ PF06249.12 ORF100617 - 8.8e-69 230.1 0.0 1.1e-68 229.8 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.12 ORF100617 - 3.7e-08 32.9 0.0 8.4e-08 31.8 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 ORF100617 - 4.4e-06 26.3 0.0 9.6e-06 25.2 0.0 1.5 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 ORF100617 - 0.02 14.8 0.0 0.038 13.9 0.0 1.4 1 0 0 1 1 1 0 AraC-like ligand binding domain AraC_binding_2 PF14525.6 ORF100617 - 0.11 12.1 0.0 0.35 10.5 0.0 1.7 3 0 0 3 3 3 0 AraC-binding-like domain Cupin_6 PF12852.7 ORF100617 - 0.16 11.7 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Cupin GST_N_3 PF13417.6 ORF100541 - 1.6e-15 57.3 0.0 2.8e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF100541 - 1.8e-11 44.2 0.0 3.6e-11 43.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF100541 - 2.2e-08 34.3 0.0 4.1e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF100541 - 3.2e-08 33.7 0.0 5.3e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF100541 - 9.2e-05 22.6 0.0 0.00015 21.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF100541 - 0.00081 19.4 0.1 0.003 17.5 0.1 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF100541 - 0.073 13.8 0.0 0.16 12.7 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain Glyco_transf_25 PF01755.17 ORF100314 - 9.6e-13 48.4 0.1 6e-11 42.6 0.0 2.4 2 1 0 2 2 2 1 Glycosyltransferase family 25 (LPS biosynthesis protein) ArsB PF02040.15 ORF100135 - 4.9e-81 273.2 10.5 5.4e-81 273.1 10.5 1.0 1 0 0 1 1 1 1 Arsenical pump membrane protein CitMHS PF03600.16 ORF100135 - 1.6e-08 34.1 15.9 1.6e-08 34.1 15.9 2.1 1 1 1 2 2 2 1 Citrate transporter TctB PF07331.11 ORF100135 - 0.0029 17.9 8.0 0.0029 17.9 8.0 2.5 1 1 0 2 2 2 1 Tripartite tricarboxylate transporter TctB family Med11 PF10280.9 NODE_32879_length_661_cov_232.506390_g26142_i0reverse_frame_1 - 0.011 16.2 0.2 0.024 15.1 0.2 1.5 1 1 0 1 1 1 0 Mediator complex protein CARD_2 PF16739.5 NODE_32879_length_661_cov_232.506390_g26142_i0reverse_frame_1 - 0.032 14.2 0.7 0.074 13.0 0.7 1.6 1 0 0 1 1 1 0 Caspase recruitment domain DUF2748 PF10871.8 NODE_32879_length_661_cov_232.506390_g26142_i0reverse_frame_1 - 0.24 10.0 3.5 2.5 6.7 0.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2748) DUF1908 PF08926.11 NODE_32854_length_662_cov_47.269537_g26121_i0forward_frame_1 - 0.22 10.6 3.2 1.3 8.0 0.7 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF1908) Flp_C PF05202.12 NODE_32850_length_662_cov_83.116427_g26117_i0reverse_frame_1 - 0.02 14.4 4.6 0.028 13.9 4.6 1.2 1 0 0 1 1 1 0 Recombinase Flp protein GXWXG PF14231.6 NODE_32850_length_662_cov_83.116427_g26117_i0forward_frame_1 - 0.039 14.0 0.0 0.068 13.3 0.0 1.3 1 0 0 1 1 1 0 GXWXG protein Carb_anhydrase PF00194.21 NODE_32815_length_662_cov_2951.355662_g26086_i0forward_frame_1 - 5.6e-29 101.4 1.0 7.6e-29 101.0 1.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Arm-DNA-bind_3 PF13356.6 NODE_32803_length_663_cov_3.447452_g26076_i0reverse_frame_1 - 0.0003 21.1 0.2 0.00062 20.1 0.2 1.6 1 0 0 1 1 1 1 Arm DNA-binding domain Phage_integrase PF00589.22 NODE_32803_length_663_cov_3.447452_g26076_i0reverse_frame_1 - 0.086 12.6 0.0 0.21 11.4 0.0 1.6 2 0 0 2 2 2 0 Phage integrase family Bac_luciferase PF00296.20 NODE_32761_length_664_cov_2.553259_g26038_i0reverse_frame_3 - 4e-43 148.0 0.1 4.9e-43 147.7 0.1 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase Cytochrom_C_asm PF01578.20 NODE_32755_length_664_cov_4.667727_g26032_i0reverse_frame_2 - 3.2e-56 190.5 19.2 4e-56 190.2 19.2 1.0 1 0 0 1 1 1 1 Cytochrome C assembly protein Dr_adhesin PF12393.8 NODE_32755_length_664_cov_4.667727_g26032_i0reverse_frame_2 - 0.14 12.5 0.4 0.63 10.4 0.4 2.2 1 0 0 1 1 1 0 Dr family adhesin DUF3094 PF11293.8 NODE_32755_length_664_cov_4.667727_g26032_i0reverse_frame_2 - 4.9 7.0 12.5 4.2 7.1 0.1 4.2 3 1 1 4 4 4 0 Protein of unknown function (DUF3094) zf-CCHH PF10283.9 NODE_32748_length_664_cov_67.050874_g26025_i0forward_frame_3 - 1.2e-12 47.6 3.2 2.4e-12 46.6 3.2 1.6 1 0 0 1 1 1 1 PBZ domain Corazonin PF17308.2 NODE_32742_length_664_cov_91.179650_g26019_i0forward_frame_3 - 0.22 11.9 0.0 0.38 11.1 0.0 1.3 1 0 0 1 1 1 0 Pro-corazonin TPR_1 PF00515.28 NODE_32732_length_664_cov_143.047695_g26009_i0reverse_frame_3 - 0.001 18.8 0.0 0.002 17.9 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_32732_length_664_cov_143.047695_g26009_i0reverse_frame_3 - 0.019 15.0 0.1 0.019 15.0 0.1 2.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_32732_length_664_cov_143.047695_g26009_i0reverse_frame_3 - 0.41 10.8 3.8 0.84 9.8 2.8 1.9 1 1 1 2 2 2 0 Tetratricopeptide repeat DUF4407 PF14362.6 NODE_32732_length_664_cov_143.047695_g26009_i0reverse_frame_3 - 3.8 6.8 7.8 6 6.1 7.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Pmp3 PF01679.17 NODE_32732_length_664_cov_143.047695_g26009_i0forward_frame_3 - 0.94 9.7 8.1 0.07 13.3 2.5 2.0 2 0 0 2 2 2 0 Proteolipid membrane potential modulator CBP_BcsO PF17037.5 NODE_32729_length_664_cov_178.378378_g26006_i0forward_frame_2 - 0.0045 17.2 6.2 0.0045 17.2 6.2 1.6 1 1 1 2 2 2 1 Cellulose biosynthesis protein BcsO Sulfotransfer_2 PF03567.14 NODE_32724_length_664_cov_204.974563_g26001_i0reverse_frame_3 - 1.7e-10 41.3 0.3 2e-05 24.7 0.1 2.1 2 0 0 2 2 2 2 Sulfotransferase family IL32 PF15225.6 NODE_32724_length_664_cov_204.974563_g26001_i0forward_frame_3 - 8.8 6.8 9.3 1.3 9.5 5.2 1.7 2 0 0 2 2 2 0 Interleukin 32 Tubulin PF00091.25 NODE_32711_length_664_cov_1606.820350_g25989_i0forward_frame_3 - 5.1e-64 216.1 0.0 5.7e-64 216.0 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 NODE_32711_length_664_cov_1606.820350_g25989_i0forward_frame_3 - 0.00076 19.8 0.0 0.0012 19.1 0.0 1.3 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 NODE_32711_length_664_cov_1606.820350_g25989_i0forward_frame_3 - 0.012 15.3 0.0 0.02 14.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 NODE_32711_length_664_cov_1606.820350_g25989_i0forward_frame_3 - 0.056 12.6 0.0 0.073 12.2 0.0 1.1 1 0 0 1 1 1 0 Tubulin like Tubulin PF00091.25 NODE_32710_length_664_cov_1634.015898_g25988_i0reverse_frame_3 - 5.1e-64 216.1 0.0 5.7e-64 216.0 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 NODE_32710_length_664_cov_1634.015898_g25988_i0reverse_frame_3 - 0.00076 19.8 0.0 0.0012 19.1 0.0 1.3 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 NODE_32710_length_664_cov_1634.015898_g25988_i0reverse_frame_3 - 0.012 15.3 0.0 0.02 14.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 NODE_32710_length_664_cov_1634.015898_g25988_i0reverse_frame_3 - 0.056 12.6 0.0 0.073 12.2 0.0 1.1 1 0 0 1 1 1 0 Tubulin like DnaJ PF00226.31 NODE_32706_length_665_cov_2.380952_g25985_i0reverse_frame_3 - 1.1e-05 25.5 0.0 1.8e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain MFS_2 PF13347.6 NODE_32704_length_665_cov_3.953968_g25983_i0forward_frame_2 - 6.7e-36 123.8 11.6 7.4e-36 123.6 11.6 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF983 PF06170.12 NODE_32704_length_665_cov_3.953968_g25983_i0forward_frame_2 - 0.69 10.4 8.2 0.38 11.2 1.7 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF983) DUF4282 PF14110.6 NODE_32704_length_665_cov_3.953968_g25983_i0forward_frame_2 - 2.7 8.8 9.6 3.2e+02 2.1 9.6 3.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4282) Fe_bilin_red PF05996.12 NODE_32700_length_665_cov_61.065079_g25979_i0forward_frame_3 - 8.1 6.0 10.6 0.24 11.0 2.9 2.1 2 0 0 2 2 2 0 Ferredoxin-dependent bilin reductase Hepatitis_core PF00906.20 NODE_32671_length_666_cov_2.015848_g25953_i0forward_frame_3 - 1.1 8.7 7.1 1.9 8.0 7.1 1.4 1 0 0 1 1 1 0 Hepatitis core antigen Membralin PF09746.9 NODE_32668_length_666_cov_2.870048_g25950_i0reverse_frame_3 - 0.017 14.2 0.4 0.028 13.5 0.4 1.2 1 0 0 1 1 1 0 Tumour-associated protein YCII PF03795.14 NODE_32668_length_666_cov_2.870048_g25950_i0reverse_frame_2 - 1.6e-28 99.0 0.0 2.1e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 YCII-related domain DUF1330 PF07045.11 NODE_32668_length_666_cov_2.870048_g25950_i0reverse_frame_2 - 0.0064 16.8 0.0 0.01 16.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1330) DUF3828 PF12883.7 NODE_32668_length_666_cov_2.870048_g25950_i0reverse_frame_2 - 0.031 14.7 0.0 1.7 9.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3828) Ribosomal_L21e PF01157.18 NODE_32668_length_666_cov_2.870048_g25950_i0reverse_frame_2 - 0.13 12.1 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L21e PPO1_KFDV PF12143.8 NODE_32652_length_666_cov_127.740095_g24717_i1forward_frame_3 - 0.08 13.0 0.1 0.2 11.7 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF_B2219) Saf_2TM PF18303.1 NODE_32644_length_666_cov_245.309033_g25932_i0forward_frame_2 - 0.27 10.8 0.3 0.47 10.0 0.3 1.3 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain NHL PF01436.21 ORF99594 - 0.00027 20.8 0.7 0.084 13.0 0.0 3.3 3 0 0 3 3 3 2 NHL repeat DUF846 PF05832.12 ORF93015 - 7.1e-45 152.5 11.8 8.6e-45 152.2 11.8 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) DUF846 PF05832.12 ORF92766 - 7.1e-45 152.5 11.8 8.6e-45 152.2 11.8 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) BLOC1_2 PF10046.9 ORF92431 - 0.0012 19.1 3.1 0.0012 19.1 3.1 3.5 2 1 1 3 3 3 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 HrpB7 PF09486.10 ORF92431 - 0.013 15.9 1.2 0.088 13.2 0.0 2.3 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) CSN5_C PF18323.1 ORF92431 - 3.1 8.8 9.1 0.25 12.3 2.8 2.5 2 1 1 3 3 3 0 Cop9 signalosome subunit 5 C-terminal domain TolA_bind_tri PF16331.5 ORF92431 - 4.9 7.3 22.1 4.9 7.3 6.3 4.5 2 2 2 4 4 4 0 TolA binding protein trimerisation ATG16 PF08614.11 ORF92431 - 5.1 7.3 22.8 2.1 8.5 5.2 3.1 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Spc7 PF08317.11 ORF92431 - 8.7 5.1 25.6 0.23 10.3 9.8 2.3 1 1 1 2 2 2 0 Spc7 kinetochore protein GATA-N PF05349.12 ORF90908 - 0.091 13.1 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 GATA-type transcription activator, N-terminal DUSP PF06337.12 ORF89860 - 2.9e-16 59.9 0.0 4e-16 59.4 0.0 1.2 1 0 0 1 1 1 1 DUSP domain MORN PF02493.20 ORF89860 - 1.7e-11 43.3 11.3 3.8e-05 23.3 0.0 5.2 5 0 0 5 5 5 4 MORN repeat Qn_am_d_aII PF14930.6 ORF89860 - 0.037 14.3 0.1 2.6 8.4 0.0 2.4 1 1 1 2 2 2 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain II DUF846 PF05832.12 ORF85787 - 7.1e-45 152.5 11.8 8.6e-45 152.2 11.8 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) PP2C PF00481.21 ORF84162 - 9.9e-48 163.0 0.0 1.3e-47 162.6 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF84162 - 0.018 14.7 0.0 0.021 14.4 0.0 1.3 1 0 0 1 1 1 0 Protein phosphatase 2C SpoIIE PF07228.12 ORF84162 - 0.041 13.8 0.0 0.78 9.6 0.0 2.0 2 0 0 2 2 2 0 Stage II sporulation protein E (SpoIIE) CxC2 PF18803.1 ORF84162 - 0.057 13.6 0.3 0.11 12.7 0.3 1.4 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases 4HFCP_synth PF04476.13 ORF84162 - 0.1 12.3 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 4-HFC-P synthase DUF846 PF05832.12 ORF82679 - 7.1e-45 152.5 11.8 8.6e-45 152.2 11.8 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) PTS_IIB PF02302.17 ORF82455 - 7.4e-12 45.8 0.0 9.7e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF4974 PF16344.5 ORF82133 - 0.047 13.7 0.4 0.12 12.4 0.4 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4974) Aldo_ket_red PF00248.21 ORF81332 - 4.8e-16 58.8 0.1 3.8e-14 52.6 0.1 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family APP_E2 PF12925.7 ORF80198 - 0.0029 17.3 5.4 0.0049 16.6 5.2 1.5 1 1 0 1 1 1 1 E2 domain of amyloid precursor protein Methyltransf_32 PF13679.6 ORF80198 - 0.016 15.2 0.8 0.023 14.7 0.8 1.3 1 0 0 1 1 1 0 Methyltransferase domain HGD-D PF06050.13 ORF80198 - 0.054 13.2 1.4 0.072 12.8 1.2 1.3 1 1 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component DUF4407 PF14362.6 ORF80198 - 0.33 10.2 2.1 0.48 9.7 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMIE PF16038.5 ORF80198 - 5.8 6.8 8.2 4.8 7.1 5.9 2.2 2 1 0 2 2 2 0 TMIE protein PRMT5_TIM PF17285.2 ORF79342 - 0.056 12.6 0.3 0.079 12.1 0.3 1.1 1 0 0 1 1 1 0 PRMT5 TIM barrel domain RCC1_2 PF13540.6 ORF78479 - 0.0018 18.0 1.6 0.97 9.3 0.3 2.6 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Stc1 PF12898.7 ORF78479 - 0.0054 17.2 0.6 0.51 10.9 0.1 2.5 1 1 1 2 2 2 2 Stc1 domain 2OG-FeII_Oxy_2 PF13532.6 ORF7785 - 1.7e-21 77.3 0.0 2.1e-21 77.0 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily CSD PF00313.22 ORF75763 - 1.2e-22 79.5 5.3 1.4e-10 40.8 0.2 2.5 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain DUF11 PF01345.18 ORF75763 - 0.003 17.8 0.1 0.0093 16.2 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function DUF11 zf-CCHC_2 PF13696.6 ORF73992 - 0.048 13.5 0.4 0.089 12.6 0.4 1.5 1 0 0 1 1 1 0 Zinc knuckle IPP-2 PF04979.14 ORF7265 - 0.0033 18.2 1.5 0.0033 18.2 1.5 2.2 2 0 0 2 2 2 1 Protein phosphatase inhibitor 2 (IPP-2) Retrotran_gag_2 PF14223.6 ORF71753 - 0.19 11.4 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type Response_reg PF00072.24 ORF71585 - 1e-20 74.0 0.1 1.9e-20 73.1 0.1 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Spore-coat_CotD PF11122.8 ORF71585 - 0.033 15.0 0.2 0.06 14.2 0.2 1.4 1 0 0 1 1 1 0 Inner spore coat protein D zf-C2H2 PF00096.26 ORF70286 - 0.056 13.9 0.2 0.2 12.2 0.2 2.1 1 0 0 1 1 1 0 Zinc finger, C2H2 type CxC2 PF18803.1 ORF67780 - 0.018 15.2 4.7 0.061 13.5 4.7 2.1 1 1 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases Transglut_core PF01841.19 ORF63221 - 0.18 12.2 0.0 0.36 11.3 0.0 1.5 1 0 0 1 1 1 0 Transglutaminase-like superfamily Mer2 PF09074.10 ORF62350 - 0.00037 20.4 3.6 0.00062 19.6 3.5 1.4 1 1 0 1 1 1 1 Mer2 Rap1_C PF11626.8 ORF62350 - 0.088 12.9 0.1 0.23 11.6 0.1 1.8 1 1 0 1 1 1 0 TRF2-interacting telomeric protein/Rap1 - C terminal domain COOH-NH2_lig PF14395.6 ORF62350 - 0.24 10.6 1.1 0.35 10.0 0.4 1.6 2 0 0 2 2 2 0 Phage phiEco32-like COOH.NH2 ligase-type 2 NAD_binding_1 PF00175.21 ORF60887 - 1.2e-24 87.0 0.0 4.8e-24 85.1 0.0 1.9 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF60887 - 4.3e-14 52.7 0.0 6.8e-14 52.0 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF60887 - 1.1e-07 32.1 0.0 1.1e-06 28.9 0.0 2.0 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF60887 - 0.073 13.5 0.3 0.12 12.8 0.3 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Ricin_B_lectin PF00652.22 ORF57869 - 3.3e-05 24.1 0.9 0.052 13.8 0.2 2.3 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain Albumin_I_a PF16720.5 ORF56999 - 0.083 12.8 1.4 0.16 11.9 1.4 1.5 1 0 0 1 1 1 0 Albumin I chain a RNA_pol_Rpa2_4 PF06883.12 ORF56780 - 0.023 14.7 0.0 0.17 11.9 0.0 2.2 2 0 0 2 2 2 0 RNA polymerase I, Rpa2 specific domain CxC2 PF18803.1 ORF56769 - 0.018 15.2 4.7 0.061 13.5 4.7 2.1 1 1 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases WBP-1 PF11669.8 ORF55998 - 0.1 13.2 0.3 0.22 12.2 0.3 1.5 1 0 0 1 1 1 0 WW domain-binding protein 1 Amidinotransf PF02274.17 ORF54936 - 1.1e-34 120.1 1.3 1.3e-34 119.8 1.3 1.0 1 0 0 1 1 1 1 Amidinotransferase DUF3782 PF12644.7 ORF54936 - 0.11 12.7 0.1 0.38 10.9 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3782) MORN PF02493.20 ORF51909 - 2.6e-20 71.0 30.2 3.3e-08 32.9 0.8 6.9 6 1 0 6 6 6 5 MORN repeat IQ PF00612.27 ORF51909 - 0.032 14.0 0.7 0.07 13.0 0.7 1.6 1 0 0 1 1 1 0 IQ calmodulin-binding motif RIF5_SNase_1 PF18187.1 ORF51909 - 0.26 11.0 0.7 2.9 7.6 0.7 2.2 1 1 0 1 1 1 0 TbRIF5 SNase domain 1 U62_UL91 PF17442.2 ORF51244 - 4.1 7.5 5.3 0.48 10.4 0.3 2.0 3 0 0 3 3 3 0 Functional domain of U62 and UL91 proteins MORN PF02493.20 ORF48691 - 2.8e-49 162.1 66.9 1.7e-08 33.9 1.9 9.9 10 0 0 10 10 10 9 MORN repeat DUF523 PF04463.12 ORF48691 - 0.81 9.7 2.5 38 4.3 0.0 3.8 2 2 2 4 4 4 0 Protein of unknown function (DUF523) DEADboxA PF12343.8 ORF48691 - 4.1 8.0 12.7 1.6 9.4 3.0 3.7 1 1 1 2 2 2 0 Cold shock protein DEAD box A Acetyltransf_1 PF00583.25 ORF48253 - 7.4e-05 23.0 0.0 0.00012 22.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF48253 - 0.00015 21.7 0.0 0.00024 21.0 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain CTP_transf_like PF01467.26 ORF47961 - 3.3e-19 69.5 0.0 4.5e-19 69.1 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase-like WD40_4 PF16300.5 ORF47961 - 0.015 15.2 0.1 0.035 14.0 0.1 1.6 1 0 0 1 1 1 0 Type of WD40 repeat SWIB PF02201.18 ORF47961 - 0.17 11.8 0.2 23 4.9 0.0 3.0 3 0 0 3 3 3 0 SWIB/MDM2 domain EphA2_TM PF14575.6 ORF47150 - 0.012 16.5 0.2 0.024 15.5 0.2 1.6 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF4692 PF15763.5 ORF47150 - 0.014 15.9 0.3 0.014 15.9 0.3 2.3 2 1 0 3 3 3 0 Regulator of human erythroid cell expansion (RHEX) DUF1048 PF06304.11 ORF46626 - 0.065 13.7 2.3 0.32 11.5 0.0 2.7 2 2 1 3 3 3 0 Protein of unknown function (DUF1048) Ras PF00071.22 ORF45645 - 2.9e-57 192.8 0.8 3.6e-57 192.5 0.8 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF45645 - 7.1e-34 116.6 0.1 1.2e-33 115.8 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF45645 - 7.6e-18 64.6 0.1 9.2e-18 64.3 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF45645 - 1.2e-06 28.6 0.0 2e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF45645 - 7.1e-06 25.5 0.1 8.7e-06 25.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF45645 - 8.1e-06 25.8 0.0 0.011 15.7 0.1 2.1 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 ORF45645 - 1.4e-05 24.7 0.1 4.5e-05 23.1 0.0 1.8 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF45645 - 0.0014 18.2 0.0 0.0098 15.4 0.0 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B CTU2 PF10288.9 ORF42607 - 0.07 13.4 4.3 0.19 11.9 4.3 1.7 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 NODP PF07684.12 ORF41748 - 0.35 11.1 1.4 0.71 10.1 1.4 1.5 1 0 0 1 1 1 0 NOTCH protein Mer2 PF09074.10 ORF40063 - 0.00037 20.4 3.6 0.00062 19.6 3.5 1.4 1 1 0 1 1 1 1 Mer2 Rap1_C PF11626.8 ORF40063 - 0.088 12.9 0.1 0.23 11.6 0.1 1.8 1 1 0 1 1 1 0 TRF2-interacting telomeric protein/Rap1 - C terminal domain COOH-NH2_lig PF14395.6 ORF40063 - 0.24 10.6 1.1 0.35 10.0 0.4 1.6 2 0 0 2 2 2 0 Phage phiEco32-like COOH.NH2 ligase-type 2 BCOR PF15808.5 ORF38843 - 0.077 13.2 1.8 0.12 12.6 1.8 1.3 1 0 0 1 1 1 0 BCL-6 co-repressor, non-ankyrin-repeat region UPA PF17217.3 ORF3619 - 0.048 13.6 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 UPA domain Tam41_Mmp37 PF09139.11 ORF34905 - 9.4e-37 127.2 2.4 1.2e-36 126.8 2.4 1.1 1 0 0 1 1 1 1 Phosphatidate cytidylyltransferase, mitochondrial SpoIISB_antitox PF14185.6 ORF34905 - 0.12 12.3 1.1 0.37 10.7 0.3 2.3 2 0 0 2 2 2 0 Antitoxin SpoIISB, type II toxin-antitoxin system Tub PF01167.18 ORF34215 - 8.4e-10 38.8 6.5 1.3e-09 38.2 0.3 2.4 1 1 1 2 2 2 2 Tub family Acetyltransf_11 PF13720.6 ORF34178 - 0.11 12.9 1.1 0.25 11.8 0.3 2.0 2 1 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Lant_dehydr_C PF14028.6 ORF34178 - 0.12 12.0 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term DUF2400 PF09674.10 ORF34178 - 4.5 7.2 10.4 1 9.3 2.2 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF2400) s48_45 PF07422.13 ORF34178 - 6.7 7.3 10.7 0.72 10.5 5.2 2.0 1 1 0 2 2 2 0 Sexual stage antigen s48/45 domain MORN PF02493.20 ORF33395 - 2.5e-21 74.2 37.5 2.3e-06 27.2 1.0 7.0 8 1 0 8 8 8 5 MORN repeat PATR PF12951.7 ORF33395 - 0.051 13.7 4.6 0.13 12.4 1.9 2.9 2 0 0 2 2 2 0 Passenger-associated-transport-repeat SM-ATX PF14438.6 ORF33395 - 0.93 9.7 2.7 41 4.4 0.0 3.3 3 1 2 5 5 5 0 Ataxin 2 SM domain Cyclin_N PF00134.23 ORF33030 - 5.1e-45 152.3 2.2 2.8e-44 149.9 0.3 2.2 2 1 0 2 2 2 2 Cyclin, N-terminal domain adh_short PF00106.25 ORF32986 - 1.1e-29 103.3 0.0 1.4e-29 102.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF32986 - 5.7e-24 85.0 0.0 7.1e-24 84.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF32986 - 1.3e-08 35.0 0.0 1.9e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF32986 - 0.00075 19.0 0.0 0.00098 18.6 0.0 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) DUF2116 PF09889.9 ORF29644 - 2 8.5 15.7 0.15 12.0 1.2 2.9 3 0 0 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) SCIMP PF15050.6 ORF29644 - 3.1 8.3 6.4 0.52 10.8 1.1 2.3 2 0 0 2 2 2 0 SCIMP protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks101.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks101.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks101.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks101.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 17:58:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FCD PF07729.12 ORF26161 - 1.8e-20 73.6 7.9 2.6e-20 73.1 7.9 1.2 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 ORF26161 - 8.6e-17 60.6 0.3 1.5e-16 59.8 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family LexA_DNA_bind PF01726.16 ORF26161 - 0.0011 18.7 0.0 0.0024 17.6 0.0 1.5 1 0 0 1 1 1 1 LexA DNA binding domain FadR_C PF07840.12 ORF26161 - 0.0043 17.0 0.1 0.0094 15.9 0.1 1.6 1 1 0 1 1 1 1 FadR C-terminal domain TrmB PF01978.19 ORF26161 - 0.0083 16.0 0.0 0.016 15.1 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 ORF26161 - 0.021 14.8 0.0 0.047 13.7 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 ORF26161 - 0.037 14.4 0.4 0.098 13.0 0.0 1.9 3 0 0 3 3 3 0 Transcriptional regulator Fe_dep_repress PF01325.19 ORF26161 - 0.11 12.7 0.0 0.29 11.3 0.0 1.7 1 1 1 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain 2OG-FeII_Oxy PF03171.20 ORF22695 - 0.013 16.0 0.1 0.26 11.8 0.0 2.1 2 0 0 2 2 2 0 2OG-Fe(II) oxygenase superfamily GST_C_3 PF14497.6 ORF18788 - 2.5e-10 40.4 0.2 9.2e-10 38.6 0.2 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF18788 - 2.8e-10 40.3 0.1 4.8e-10 39.5 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF18788 - 2.8e-08 34.0 0.0 4.8e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF18788 - 4.3e-07 30.2 0.0 9.1e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF18788 - 1.7e-05 25.0 0.0 3.7e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF18788 - 0.00085 19.3 0.0 0.0016 18.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Tom37 PF10568.9 ORF18788 - 0.002 18.4 0.0 0.0038 17.5 0.0 1.5 1 0 0 1 1 1 1 Outer mitochondrial membrane transport complex protein GST_N_4 PF17172.4 ORF18788 - 0.0058 17.3 0.0 0.012 16.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain Glutaredoxin PF00462.24 ORF18788 - 0.037 14.2 0.1 0.66 10.2 0.0 2.3 2 0 0 2 2 2 0 Glutaredoxin Albumin_I_a PF16720.5 ORF151060 - 0.083 12.8 1.4 0.16 11.9 1.4 1.5 1 0 0 1 1 1 0 Albumin I chain a eIF-5_eIF-2B PF01873.17 ORF148882 - 1.4e-31 108.8 1.3 2.5e-31 108.0 1.3 1.4 1 0 0 1 1 1 1 Domain found in IF2B/IF5 zinc_ribbon_6 PF14599.6 ORF148882 - 0.011 15.7 2.3 0.14 12.2 0.6 2.5 2 0 0 2 2 2 0 Zinc-ribbon TF_Zn_Ribbon PF08271.12 ORF148882 - 0.012 15.1 0.2 0.03 13.8 0.2 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding Elf1 PF05129.13 ORF148882 - 0.019 15.0 2.3 0.019 15.0 2.3 2.3 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like PIN_2 PF10130.9 ORF148882 - 0.12 12.7 0.2 1.1 9.5 0.1 2.1 2 0 0 2 2 2 0 PIN domain Zn-ribbon_8 PF09723.10 ORF148882 - 0.18 12.0 2.2 2.1 8.5 0.0 2.4 1 1 0 1 1 1 0 Zinc ribbon domain Rubredoxin_2 PF18073.1 ORF148882 - 0.2 11.4 2.0 3.5 7.5 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain CxC4 PF18717.1 ORF148882 - 0.26 11.1 3.3 1.1 9.1 2.6 2.2 2 1 1 3 3 3 0 CxC4 like cysteine cluster associated with KDZ transposases Exonuc_VII_L PF02601.15 ORF142900 - 4.1 6.9 11.5 5.2 6.5 11.5 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit fn1 PF00039.18 ORF142530 - 0.05 13.8 9.0 0.25 11.6 0.6 2.4 2 0 0 2 2 2 0 Fibronectin type I domain Ank_5 PF13857.6 ORF13983 - 7.3e-22 77.2 4.3 2.1e-12 47.0 0.5 4.3 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF13983 - 1.7e-21 76.6 4.8 1.3e-15 57.7 0.7 2.9 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF13983 - 3.2e-15 56.3 1.0 4.1e-07 30.4 0.1 3.6 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF13983 - 5.8e-14 50.8 0.5 6.4e-05 23.1 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF13983 - 2.4e-13 49.8 4.8 4.4e-06 26.9 0.1 4.5 4 1 0 4 4 4 3 Ankyrin repeat Alpha_kinase PF02816.18 ORF138114 - 8.5e-15 55.4 1.7 1.4e-14 54.7 1.7 1.3 1 0 0 1 1 1 1 Alpha-kinase family Laminin_II PF06009.12 ORF137510 - 0.00062 19.8 7.3 0.00062 19.8 7.3 2.8 1 1 1 2 2 2 1 Laminin Domain II Leu_zip PF15294.6 ORF137510 - 0.013 15.0 32.5 0.017 14.7 14.7 2.2 1 1 1 2 2 2 0 Leucine zipper HALZ PF02183.18 ORF137510 - 0.023 14.9 24.4 0.11 12.8 5.8 4.7 4 0 0 4 4 4 0 Homeobox associated leucine zipper YabA PF06156.13 ORF137510 - 0.029 15.0 9.4 0.029 15.0 9.4 3.0 1 1 1 2 2 2 0 Initiation control protein YabA Laminin_I PF06008.14 ORF137510 - 0.046 13.4 27.8 0.071 12.8 27.3 1.5 1 1 0 1 1 1 0 Laminin Domain I CENP-F_leu_zip PF10473.9 ORF137510 - 0.12 12.4 39.5 0.12 12.4 2.3 3.2 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAGA PF09237.11 ORF137510 - 0.15 11.9 0.0 0.34 10.8 0.0 1.6 1 0 0 1 1 1 0 GAGA factor Golgin_A5 PF09787.9 ORF137510 - 0.39 10.2 34.2 0.52 9.7 14.8 2.0 1 1 1 2 2 2 0 Golgin subfamily A member 5 GAS PF13851.6 ORF137510 - 0.88 8.9 39.8 2 7.7 27.0 2.7 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding CENP-H PF05837.12 ORF137510 - 1.1 9.7 31.1 0.22 12.0 4.7 3.5 1 1 1 3 3 3 0 Centromere protein H (CENP-H) Spc24 PF08286.11 ORF137510 - 1.3 9.3 33.1 0.11 12.7 5.2 3.6 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 DUF724 PF05266.14 ORF137510 - 1.4 8.7 33.1 0.027 14.3 6.9 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF724) APG6_N PF17675.1 ORF137510 - 4.4 7.8 40.0 10 6.6 16.3 3.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Jnk-SapK_ap_N PF09744.9 ORF137510 - 4.9 7.4 34.4 1 9.6 12.1 2.4 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 JIP_LZII PF16471.5 ORF137510 - 5.4 7.3 23.6 0.61 10.3 6.7 3.6 2 2 2 4 4 4 0 JNK-interacting protein leucine zipper II DMPK_coil PF08826.10 ORF137510 - 5.5 7.2 31.1 1.5 9.0 5.4 4.4 2 2 2 4 4 4 0 DMPK coiled coil domain like DUF3450 PF11932.8 ORF137510 - 9.2 5.5 28.2 0.18 11.1 10.3 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Seryl_tRNA_N PF02403.22 ORF137510 - 9.8 6.5 34.3 1.4 9.2 14.0 2.7 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain UPF0149 PF03695.13 ORF136811 - 1.2e-40 139.6 1.1 1.5e-40 139.3 1.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0149) RRM_1 PF00076.22 ORF136740 - 1e-12 47.7 0.1 1.6e-12 47.1 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF136740 - 7e-12 44.9 16.2 9.1e-06 25.5 5.3 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF136740 - 2.3e-05 24.0 17.4 0.0059 16.3 5.7 2.4 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF136740 - 0.0021 18.0 15.2 0.022 14.7 8.0 2.4 1 1 1 2 2 2 2 Zinc knuckle Limkain-b1 PF11608.8 ORF136740 - 0.0023 18.0 0.0 0.0043 17.1 0.0 1.4 1 0 0 1 1 1 1 Limkain b1 RRM_3 PF08777.11 ORF136740 - 0.0068 16.4 0.2 0.012 15.7 0.2 1.4 1 0 0 1 1 1 1 RNA binding motif ProRS-C_1 PF09180.11 ORF136740 - 0.008 16.4 1.0 0.012 15.8 0.1 1.7 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal zf-CCHC_4 PF14392.6 ORF136740 - 0.011 15.5 8.0 0.29 10.9 1.3 2.5 2 0 0 2 2 2 0 Zinc knuckle Nup35_RRM_2 PF14605.6 ORF136740 - 0.015 15.3 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 ORF136740 - 0.019 15.1 0.1 0.035 14.2 0.1 1.5 1 1 0 1 1 1 0 RNA recognition motif RNA_bind PF08675.11 ORF136740 - 0.037 14.0 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 RNA binding domain DbpA PF03880.15 ORF136740 - 0.053 13.5 0.4 0.089 12.8 0.4 1.4 1 0 0 1 1 1 0 DbpA RNA binding domain NPR3 PF03666.13 ORF136740 - 1.6 7.5 4.3 1.9 7.2 4.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 zf-CCHC_2 PF13696.6 ORF136740 - 2 8.3 18.2 5 7.0 4.9 2.4 2 0 0 2 2 2 0 Zinc knuckle Vut_1 PF02592.15 ORF136244 - 8.7e-37 126.7 14.1 8.7e-37 126.7 14.1 1.7 2 0 0 2 2 2 1 Putative vitamin uptake transporter DUF373 PF04123.13 ORF136244 - 0.9 8.9 5.8 1.3 8.4 5.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF373) YesK PF14150.6 ORF136244 - 2.2 8.5 11.0 0.076 13.2 2.9 2.5 3 0 0 3 3 3 0 YesK-like protein Ribul_P_3_epim PF00834.19 ORF134113 - 1.8e-84 282.1 0.1 2.1e-84 281.9 0.1 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family BKACE PF05853.12 ORF134113 - 0.00016 21.1 0.0 0.00024 20.5 0.0 1.3 1 0 0 1 1 1 1 beta-keto acid cleavage enzyme PEP_mutase PF13714.6 ORF134113 - 0.0011 18.4 0.0 0.25 10.8 0.0 2.5 1 1 0 2 2 2 2 Phosphoenolpyruvate phosphomutase PcrB PF01884.17 ORF134113 - 0.002 17.6 0.5 0.21 11.0 0.0 2.1 1 1 1 2 2 2 2 PcrB family NanE PF04131.14 ORF134113 - 0.0028 16.9 0.4 0.02 14.1 0.4 2.1 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.21 ORF134113 - 0.022 13.9 0.0 1.1 8.3 0.0 2.1 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.19 ORF134113 - 0.038 13.8 0.1 4.1 7.1 0.0 2.8 2 1 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain Sp38 PF07354.12 ORF134113 - 0.048 13.1 0.0 0.071 12.5 0.0 1.3 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) His_biosynth PF00977.21 ORF134113 - 0.056 12.9 0.1 0.16 11.4 0.0 1.8 2 0 0 2 2 2 0 Histidine biosynthesis protein OMPdecase PF00215.24 ORF134113 - 0.057 13.0 0.6 0.12 12.0 0.6 1.9 1 1 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family PEP_hydrolase PF09370.10 ORF134113 - 0.089 12.0 0.1 0.44 9.7 0.0 2.2 2 1 0 2 2 2 0 Phosphoenolpyruvate hydrolase-like Radical_SAM PF04055.21 ORF134113 - 0.1 13.0 0.0 2.8 8.3 0.0 2.4 1 1 1 2 2 2 0 Radical SAM superfamily EF-hand_1 PF00036.32 ORF130295 - 2.1e-14 51.9 10.5 1.3e-06 27.6 0.5 4.7 4 1 0 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF130295 - 1.2e-13 51.2 6.5 4.9e-10 39.7 3.4 2.7 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF130295 - 1.7e-13 49.3 6.5 1.7e-05 24.4 0.2 3.8 4 0 0 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 ORF130295 - 3.8e-11 42.0 2.9 0.00023 20.5 0.1 3.5 3 0 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF130295 - 0.00016 21.9 1.2 0.13 12.6 0.3 2.8 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF130295 - 0.0011 19.2 0.1 3.1 8.0 0.0 3.3 3 0 0 3 3 3 2 Dockerin type I domain EF-hand_10 PF14788.6 ORF130295 - 0.009 15.9 1.3 5.7 6.9 0.0 2.9 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF130295 - 0.028 14.2 9.0 0.63 9.9 0.1 4.2 4 1 1 5 5 5 0 EF-hand domain pair Polysacc_syn_2C PF08485.10 ORF130295 - 0.03 14.0 0.1 0.093 12.4 0.1 1.9 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein C-terminal DSPc PF00782.20 ORF127617 - 2.2e-33 114.9 0.0 3.4e-33 114.3 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF127617 - 0.00031 20.4 0.0 0.00049 19.7 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 ORF127617 - 0.017 15.1 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family Init_tRNA_PT PF04179.12 ORF127617 - 0.041 14.2 0.8 0.07 13.4 0.0 1.7 2 0 0 2 2 2 0 Rit1 DUSP-like domain PTPlike_phytase PF14566.6 ORF127617 - 0.041 14.0 0.0 0.059 13.5 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate Y_phosphatase2 PF03162.13 ORF127617 - 0.093 12.3 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family Peptidase_M10 PF00413.24 ORF127617 - 0.098 12.5 0.0 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 Matrixin HAD_2 PF13419.6 ORF127089 - 3.7e-21 76.0 0.0 4.3e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF127089 - 9.1e-10 39.2 0.1 7.3e-09 36.2 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF127089 - 0.0088 16.1 0.2 5 7.3 0.1 2.7 2 1 1 3 3 3 2 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF127089 - 0.14 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 HAD-hyrolase-like Peptidase_M14 PF00246.24 ORF126783 - 1.2e-09 38.4 0.0 2.3e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 Zinc carboxypeptidase PRKCSH-like PF12999.7 ORF126783 - 0.11 12.3 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Glucosidase II beta subunit-like Vitelline_membr PF10542.9 ORF125504 - 0.32 10.9 2.2 2.9 7.8 1.0 2.5 2 0 0 2 2 2 0 Vitelline membrane cysteine-rich region NUDIX PF00293.28 ORF125355 - 1e-10 41.8 0.1 1.6e-10 41.1 0.1 1.3 1 0 0 1 1 1 1 NUDIX domain CLN3 PF02487.17 ORF123478 - 2.1e-18 66.6 4.5 2.6e-18 66.3 4.5 1.0 1 0 0 1 1 1 1 CLN3 protein OprD PF03573.13 ORF121254 - 8.8e-05 21.7 0.0 0.00011 21.4 0.0 1.1 1 0 0 1 1 1 1 outer membrane porin, OprD family Phage_antitermQ PF06530.12 ORF117531 - 3e-52 175.5 0.3 3.9e-52 175.2 0.3 1.1 1 0 0 1 1 1 1 Phage antitermination protein Q DUF1133 PF06576.11 ORF117531 - 0.088 12.2 0.0 0.16 11.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1133) Ras PF00071.22 ORF117046 - 7.1e-50 168.8 1.2 1.4e-49 167.9 1.2 1.4 1 1 0 1 1 1 1 Ras family Roc PF08477.13 ORF117046 - 1.3e-31 109.3 0.2 2.8e-31 108.2 0.0 1.7 2 0 0 2 2 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF117046 - 4.2e-11 42.6 0.1 6.6e-11 42.0 0.1 1.5 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF117046 - 9.9e-08 32.1 0.0 2e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF117046 - 4e-05 23.1 0.3 5e-05 22.8 0.3 1.3 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF117046 - 0.00015 21.3 0.8 0.0054 16.2 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF117046 - 0.00028 20.5 2.3 0.041 13.4 2.3 2.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AAA_24 PF13479.6 ORF117046 - 0.0014 18.4 0.9 0.0099 15.6 0.0 2.0 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 ORF117046 - 0.0018 18.2 1.0 0.014 15.3 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 ORF117046 - 0.0023 18.3 0.0 0.0044 17.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF117046 - 0.0025 18.1 0.1 0.0057 16.9 0.0 1.8 2 1 0 2 2 2 1 AAA domain cobW PF02492.19 ORF117046 - 0.0062 16.1 0.0 0.016 14.8 0.0 1.7 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 ORF117046 - 0.0072 15.9 1.0 0.016 14.7 0.1 1.8 2 0 0 2 2 2 1 P-loop containing dynein motor region PduV-EutP PF10662.9 ORF117046 - 0.008 15.9 0.2 0.017 14.9 0.2 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 ORF117046 - 0.013 15.4 0.1 0.034 14.1 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 ORF117046 - 0.021 14.6 0.0 0.037 13.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Septin PF00735.18 ORF117046 - 0.022 14.0 0.1 0.044 13.0 0.1 1.5 1 0 0 1 1 1 0 Septin TniB PF05621.11 ORF117046 - 0.031 13.7 0.1 0.066 12.6 0.1 1.5 1 0 0 1 1 1 0 Bacterial TniB protein MCM PF00493.23 ORF117046 - 0.076 12.1 0.1 0.33 10.0 0.0 1.9 2 0 0 2 2 2 0 MCM P-loop domain ABC_tran PF00005.27 ORF117046 - 0.091 13.3 3.5 0.38 11.3 3.5 2.0 1 1 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 ORF117046 - 0.11 12.6 0.2 0.38 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain Albumin_I_a PF16720.5 ORF112716 - 0.083 12.8 1.4 0.16 11.9 1.4 1.5 1 0 0 1 1 1 0 Albumin I chain a Ribosomal_L7Ae PF01248.26 ORF112663 - 2.6e-21 75.2 0.2 4.8e-21 74.3 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNase_P_pop3 PF08228.11 ORF112663 - 0.0071 16.4 0.1 0.0099 15.9 0.1 1.3 1 0 0 1 1 1 1 RNase P subunit Pop3 Fer4_11 PF13247.6 ORF112663 - 0.1 12.8 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF334 PF03904.13 ORF112663 - 4.2 6.8 6.7 3.7 7.0 1.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF334) Spc7 PF08317.11 ORF111747 - 0.055 12.3 15.7 0.016 14.1 13.0 1.5 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF4407 PF14362.6 ORF111747 - 0.65 9.3 3.9 0.79 9.0 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF111747 - 0.72 10.5 9.1 0.6 10.8 3.9 2.6 2 1 0 2 2 2 0 SlyX Atg14 PF10186.9 ORF111747 - 3.7 6.5 11.8 4.8 6.2 11.8 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1664 PF07889.12 ORF111747 - 4.6 7.3 8.7 3.4 7.7 6.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) FapA PF03961.13 ORF111747 - 6 5.4 13.8 7.6 5.0 13.2 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A NAD_binding_5 PF07994.12 ORF111747 - 10 5.4 7.7 4.5 6.6 5.6 1.5 2 0 0 2 2 2 0 Myo-inositol-1-phosphate synthase Carb_kinase PF01256.17 ORF110571 - 2e-29 102.8 0.0 2.5e-29 102.5 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate kinase DUF846 PF05832.12 ORF105875 - 7.1e-45 152.5 11.8 8.6e-45 152.2 11.8 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) EI24 PF07264.11 ORF103290 - 1.1e-13 51.8 1.5 1.5e-13 51.4 1.5 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) Ras PF00071.22 ORF102441 - 5.1e-55 185.5 0.1 6.3e-55 185.2 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF102441 - 7.8e-37 126.2 0.2 1.6e-36 125.1 0.2 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF102441 - 6.1e-13 48.6 0.1 8.3e-13 48.2 0.1 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family FeoB_N PF02421.18 ORF102441 - 2.6e-05 23.8 0.0 0.0083 15.7 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF102441 - 4.4e-05 23.1 0.1 9.1e-05 22.1 0.1 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF102441 - 0.00029 20.3 0.2 0.00044 19.7 0.2 1.3 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF102441 - 0.00073 19.6 0.1 0.0015 18.5 0.1 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF102441 - 0.0017 18.3 0.0 0.16 11.8 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase AAA_7 PF12775.7 ORF102441 - 0.0024 17.4 0.8 0.051 13.1 0.1 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region SRPRB PF09439.10 ORF102441 - 0.016 14.7 0.2 0.027 13.9 0.2 1.6 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_28 PF13521.6 ORF102441 - 0.016 15.4 0.0 0.87 9.8 0.0 2.2 1 1 0 1 1 1 0 AAA domain DUF236 PF03057.14 ORF102441 - 0.055 13.4 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 DUF236 repeat eIF-5_eIF-2B PF01873.17 ORF101496 - 1.4e-31 108.8 1.3 2.5e-31 108.0 1.3 1.4 1 0 0 1 1 1 1 Domain found in IF2B/IF5 zinc_ribbon_6 PF14599.6 ORF101496 - 0.011 15.7 2.3 0.14 12.2 0.6 2.5 2 0 0 2 2 2 0 Zinc-ribbon TF_Zn_Ribbon PF08271.12 ORF101496 - 0.012 15.1 0.2 0.03 13.8 0.2 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding Elf1 PF05129.13 ORF101496 - 0.019 15.0 2.3 0.019 15.0 2.3 2.3 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like PIN_2 PF10130.9 ORF101496 - 0.12 12.7 0.2 1.1 9.5 0.1 2.1 2 0 0 2 2 2 0 PIN domain Zn-ribbon_8 PF09723.10 ORF101496 - 0.18 12.0 2.2 2.1 8.5 0.0 2.4 1 1 0 1 1 1 0 Zinc ribbon domain Rubredoxin_2 PF18073.1 ORF101496 - 0.2 11.4 2.0 3.5 7.5 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain CxC4 PF18717.1 ORF101496 - 0.26 11.1 3.3 1.1 9.1 2.6 2.2 2 1 1 3 3 3 0 CxC4 like cysteine cluster associated with KDZ transposases DUF2499 PF10693.9 ORF100779 - 4.6e-31 106.9 4.5 7.8e-31 106.2 4.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2499) DUF3413 PF11893.8 ORF100779 - 0.69 9.0 4.6 1.2 8.3 4.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) Ribonuc_red_lgC PF02867.15 NODE_33038_length_658_cov_3.887640_g26277_i0reverse_frame_1 - 1.3e-55 188.9 0.0 1.6e-55 188.6 0.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain PRCC PF10253.9 NODE_33020_length_658_cov_184.470305_g1699_i4forward_frame_1 - 0.025 15.4 4.2 0.029 15.1 4.2 1.2 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting Nod1 PF17114.5 NODE_33005_length_658_cov_16572.491172_g14721_i2forward_frame_1 - 0.2 11.8 4.8 0.34 11.1 4.8 1.3 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 FAST_1 PF06743.15 NODE_32946_length_660_cov_99.804800_g26200_i0forward_frame_1 - 1.3e-05 25.0 0.8 0.0049 16.8 0.1 2.5 1 1 1 2 2 2 2 FAST kinase-like protein, subdomain 1 RRM_1 PF00076.22 NODE_32943_length_660_cov_127.830400_g26197_i0forward_frame_1 - 1.6e-14 53.5 0.0 2.1e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 NODE_32943_length_660_cov_127.830400_g26197_i0forward_frame_1 - 0.0016 18.0 0.0 0.0027 17.3 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RCC1_2 PF13540.6 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 1.4e-44 149.0 40.4 9.6e-11 41.2 0.6 6.0 6 0 0 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 1.2e-05 25.8 53.6 0.9 10.2 2.4 9.7 6 5 1 7 7 7 4 Regulator of chromosome condensation (RCC1) repeat Kelch_5 PF13854.6 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 0.035 14.1 7.1 5 7.2 0.1 4.9 5 0 0 5 5 5 0 Kelch motif Peptidase_C58 PF03543.14 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 0.098 12.4 0.0 36 4.0 0.0 3.5 4 0 0 4 4 4 0 Yersinia/Haemophilus virulence surface antigen Kelch_6 PF13964.6 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 0.6 10.5 5.1 7.1 7.1 0.2 4.0 5 0 0 5 5 5 0 Kelch motif Kelch_4 PF13418.6 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_1 - 2.3 8.3 8.6 6.3 6.9 0.1 4.0 5 0 0 5 5 5 0 Galactose oxidase, central domain Acetyltransf_16 PF05301.11 NODE_32911_length_661_cov_3.214058_g26170_i0reverse_frame_3 - 1e-44 152.4 0.9 1.3e-44 152.1 0.9 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Acetyltransf_7 PF13508.7 NODE_32911_length_661_cov_3.214058_g26170_i0reverse_frame_3 - 0.002 18.5 0.0 0.0034 17.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_32911_length_661_cov_3.214058_g26170_i0reverse_frame_3 - 0.016 15.4 0.0 0.025 14.8 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 NODE_32911_length_661_cov_3.214058_g26170_i0reverse_frame_3 - 0.05 13.5 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain R3H PF01424.22 NODE_32909_length_661_cov_3.412141_g26168_i0reverse_frame_3 - 2.5 8.2 5.4 1.5 8.9 2.0 2.2 1 1 1 2 2 2 0 R3H domain TetR_N PF00440.23 NODE_32909_length_661_cov_3.412141_g26168_i0reverse_frame_2 - 0.013 15.3 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family adh_short PF00106.25 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 2.3e-34 118.6 0.8 2.8e-34 118.3 0.8 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 1e-23 84.1 1.5 1.4e-23 83.7 1.5 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.00027 20.5 0.2 0.00033 20.2 0.2 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.009 16.6 0.1 0.018 15.6 0.1 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.6 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.021 14.7 1.1 0.025 14.5 1.1 1.2 1 0 0 1 1 1 0 NAD(P)H-binding Eno-Rase_NADH_b PF12242.8 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.026 14.3 0.2 0.38 10.6 0.1 2.3 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase THF_DHG_CYH_C PF02882.19 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.1 11.9 0.0 0.23 10.8 0.0 1.6 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NmrA PF05368.13 NODE_32909_length_661_cov_3.412141_g26168_i0forward_frame_2 - 0.22 11.0 1.1 0.3 10.6 1.1 1.1 1 0 0 1 1 1 0 NmrA-like family 2OG-FeII_Oxy_3 PF13640.6 NODE_32882_length_661_cov_188.410543_g23278_i1reverse_frame_2 - 2.4e-13 50.8 0.0 3.6e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Oxygenase-NA PF09859.9 NODE_32882_length_661_cov_188.410543_g23278_i1reverse_frame_2 - 0.015 14.8 0.1 0.06 12.9 0.1 1.8 1 1 0 1 1 1 0 Oxygenase, catalysing oxidative methylation of damaged DNA 2OG-Fe_Oxy_2 PF10014.9 NODE_32882_length_661_cov_188.410543_g23278_i1reverse_frame_2 - 0.038 13.8 0.0 0.057 13.2 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe dioxygenase DUF4125 PF13526.6 NODE_32882_length_661_cov_188.410543_g23278_i1reverse_frame_2 - 0.075 12.6 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4125) SNF5 PF04855.12 NODE_32854_length_662_cov_47.269537_g26121_i0reverse_frame_3 - 0.17 11.6 0.0 0.23 11.2 0.0 1.1 1 0 0 1 1 1 0 SNF5 / SMARCB1 / INI1 CarboxypepD_reg PF13620.6 NODE_32850_length_662_cov_83.116427_g26117_i0forward_frame_3 - 0.021 15.1 0.0 0.47 10.8 0.0 2.2 2 0 0 2 2 2 0 Carboxypeptidase regulatory-like domain DUF1207 PF06727.11 NODE_32840_length_662_cov_145.610845_g26108_i0forward_frame_3 - 0.12 11.2 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1207) RCC1_2 PF13540.6 NODE_32831_length_662_cov_212.207337_g26100_i0forward_frame_3 - 1.4e-08 34.3 14.0 0.028 14.2 0.1 5.3 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Phage_P2_GpU PF06995.11 NODE_32831_length_662_cov_212.207337_g26100_i0forward_frame_3 - 0.033 13.8 0.1 13 5.5 0.0 3.5 3 1 1 4 4 4 0 Phage P2 GpU Spectrin PF00435.21 NODE_32831_length_662_cov_212.207337_g26100_i0forward_frame_3 - 0.05 14.1 0.1 65 4.1 0.0 4.0 4 1 1 5 5 5 0 Spectrin repeat EF-hand_13 PF17958.1 NODE_32829_length_662_cov_216.891547_g26098_i0reverse_frame_3 - 0.044 13.6 0.0 0.076 12.8 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain AA_permease_2 PF13520.6 NODE_32802_length_663_cov_3.528662_g26075_i0forward_frame_2 - 5.9e-09 35.3 25.5 6.6e-09 35.1 25.5 1.1 1 0 0 1 1 1 1 Amino acid permease MASE4 PF17158.4 NODE_32802_length_663_cov_3.528662_g26075_i0forward_frame_2 - 0.0031 16.8 0.4 0.0049 16.2 0.4 1.3 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain YrvL PF14184.6 NODE_32802_length_663_cov_3.528662_g26075_i0forward_frame_2 - 0.05 13.7 0.8 0.05 13.7 0.8 1.7 2 0 0 2 2 2 0 Regulatory protein YrvL 4PPT_N PF17837.1 NODE_32800_length_663_cov_3.757962_g26073_i0reverse_frame_2 - 2.7e-19 69.1 0.7 6e-19 67.9 0.3 1.7 2 0 0 2 2 2 1 4'-phosphopantetheinyl transferase N-terminal domain ACPS PF01648.20 NODE_32800_length_663_cov_3.757962_g26073_i0reverse_frame_2 - 3e-11 43.4 0.4 1e-10 41.7 0.1 1.9 2 0 0 2 2 2 1 4'-phosphopantetheinyl transferase superfamily MCC-bdg_PDZ PF10506.9 NODE_32796_length_663_cov_61.937898_g26069_i0reverse_frame_2 - 0.053 13.5 2.9 0.089 12.8 2.0 1.8 2 0 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome CSD PF00313.22 ORF97792 - 1.4e-12 47.2 2.3 8.9e-06 25.5 0.1 2.7 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF97792 - 0.00041 20.0 2.4 0.0083 15.8 0.1 2.6 2 1 0 2 2 2 2 Ribonuclease B OB domain CusF_Ec PF11604.8 ORF97792 - 0.03 14.3 0.1 1.2 9.2 0.0 2.6 3 0 0 3 3 3 0 Copper binding periplasmic protein CusF Hexapep PF00132.24 ORF96515 - 1.4e-08 34.1 5.6 1.5e-07 30.9 0.4 2.3 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF96515 - 0.00011 21.9 11.4 0.001 18.8 1.6 2.2 1 1 1 2 2 2 2 Hexapeptide repeat of succinyl-transferase XPG_N PF00752.17 ORF96295 - 1.2e-30 106.0 0.2 3.4e-30 104.5 0.0 1.8 2 0 0 2 2 2 1 XPG N-terminal domain Exonuc_VII_L PF02601.15 ORF96295 - 0.62 9.6 7.6 0.72 9.4 7.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Lipase_C PF18067.1 ORF94205 - 0.064 13.8 0.0 0.12 13.0 0.0 1.5 1 0 0 1 1 1 0 Lipase C-terminal domain Nucleoporin2 PF04096.14 ORF94205 - 0.085 13.0 4.0 3 8.0 0.5 2.3 2 0 0 2 2 2 0 Nucleoporin autopeptidase AhpC-TSA PF00578.21 ORF92281 - 6.9e-34 116.4 0.0 9.7e-34 116.0 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF92281 - 2e-15 56.8 0.0 2.5e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF92281 - 1.6e-12 47.0 0.0 2.7e-12 46.3 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF92281 - 0.0045 16.9 0.0 0.01 15.8 0.0 1.6 2 0 0 2 2 2 1 SCO1/SenC Thioredoxin_8 PF13905.6 ORF92281 - 0.0096 16.2 0.0 0.015 15.6 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Aldo_ket_red PF00248.21 ORF90274 - 1.6e-40 139.2 0.0 1.9e-40 138.9 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family RNB PF00773.19 ORF90223 - 2.2e-16 60.1 0.3 3.8e-16 59.3 0.3 1.4 1 0 0 1 1 1 1 RNB domain Rrp44_S1 PF17215.3 ORF90223 - 2.2e-08 33.9 0.1 5.7e-08 32.6 0.1 1.7 1 1 0 1 1 1 1 S1 domain S1 PF00575.23 ORF90223 - 0.072 13.5 0.1 0.24 11.8 0.1 1.9 1 1 0 1 1 1 0 S1 RNA binding domain Aspzincin_M35 PF14521.6 ORF88949 - 6.5e-07 30.0 0.1 1.3e-06 29.0 0.1 1.5 1 0 0 1 1 1 1 Lysine-specific metallo-endopeptidase GST_C PF00043.25 ORF88763 - 2.6e-15 56.4 0.1 4.2e-15 55.8 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF88763 - 2e-11 44.1 0.0 3.5e-11 43.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF88763 - 1.6e-10 41.2 0.0 3.1e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF88763 - 2.2e-09 37.4 0.2 3.8e-09 36.6 0.2 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF88763 - 3.3e-07 30.2 0.0 6.4e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF88763 - 4.3e-05 23.7 0.0 8.7e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF88763 - 0.17 11.7 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain FAM104 PF15434.6 ORF81785 - 0.065 13.8 7.5 2.3 8.8 4.6 2.2 2 0 0 2 2 2 0 Family 104 Trp_oprn_chp PF09534.10 ORF80448 - 0.018 14.9 1.0 0.024 14.4 1.0 1.4 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) T4SS_CagC PF16943.5 ORF7628 - 0.07 13.3 1.8 34 4.7 0.0 3.2 3 1 0 3 3 3 0 Cag pathogenicity island, type IV secretory system DUF1453 PF07301.11 ORF7628 - 0.085 12.9 3.7 1.9 8.5 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1453) RFX_DNA_binding PF02257.15 ORF74049 - 0.019 15.6 0.3 0.099 13.3 0.0 2.1 2 0 0 2 2 2 0 RFX DNA-binding domain DUF2192 PF09958.9 ORF74049 - 0.04 13.4 0.6 0.057 12.9 0.6 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2192) DUF5641 PF18701.1 ORF74049 - 0.065 13.4 0.5 1.8 8.8 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5641) TAL_FSA PF00923.19 ORF6708 - 2.7e-47 161.5 0.1 5.9e-47 160.4 0.1 1.5 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase Nab2 PF11517.8 ORF6708 - 0.12 12.7 0.0 0.31 11.4 0.0 1.7 1 1 1 2 2 2 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) Trns_repr_metal PF02583.17 ORF64240 - 0.087 13.2 0.8 0.15 12.4 0.2 1.8 2 0 0 2 2 2 0 Metal-sensitive transcriptional repressor GST_C PF00043.25 ORF63067 - 2.6e-15 56.4 0.1 4.2e-15 55.8 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF63067 - 2e-11 44.1 0.0 3.5e-11 43.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF63067 - 1.6e-10 41.2 0.0 3.1e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF63067 - 2.2e-09 37.4 0.2 3.8e-09 36.6 0.2 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF63067 - 3.3e-07 30.2 0.0 6.4e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF63067 - 4.3e-05 23.7 0.0 8.7e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF63067 - 0.17 11.7 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Pkinase PF00069.25 ORF62804 - 3.2e-28 98.8 0.1 3.6e-28 98.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62804 - 3.5e-21 75.6 0.1 4.3e-21 75.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF62804 - 2e-06 26.8 0.0 2e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF62804 - 0.00062 19.8 0.0 0.002 18.1 0.0 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF62804 - 0.039 12.9 0.1 0.049 12.6 0.1 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Topoisom_bac PF01131.20 ORF62804 - 0.052 12.5 0.1 0.075 12.0 0.1 1.2 1 0 0 1 1 1 0 DNA topoisomerase Kinase-like PF14531.6 ORF62804 - 0.077 12.3 0.1 8.3 5.6 0.0 2.1 2 0 0 2 2 2 0 Kinase-like ABC1 PF03109.16 ORF62804 - 0.16 12.2 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 ABC1 family GST_C PF00043.25 ORF62494 - 2.6e-15 56.4 0.1 4.2e-15 55.8 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF62494 - 2e-11 44.1 0.0 3.5e-11 43.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF62494 - 1.6e-10 41.2 0.0 3.1e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF62494 - 2.2e-09 37.4 0.2 3.8e-09 36.6 0.2 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF62494 - 3.3e-07 30.2 0.0 6.4e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF62494 - 4.3e-05 23.7 0.0 8.7e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF62494 - 0.17 11.7 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain TPR_2 PF07719.17 ORF61743 - 5.5e-06 26.1 11.7 0.0048 16.9 1.4 3.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF61743 - 1.9e-05 24.3 9.1 0.0016 18.2 1.0 3.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF61743 - 0.00015 21.3 10.6 0.0034 17.0 5.1 3.4 3 1 0 3 3 3 1 TPR repeat TPR_17 PF13431.6 ORF61743 - 0.00029 21.0 10.1 0.0018 18.5 0.9 3.6 3 1 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF61743 - 0.0038 17.4 7.6 0.032 14.5 0.1 2.3 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF61743 - 0.0067 17.2 12.2 0.0085 16.8 2.8 3.6 1 1 3 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF61743 - 0.017 15.4 11.7 0.25 11.6 0.2 2.5 1 1 0 2 2 2 0 Tetratricopeptide repeat ChAPs PF09295.10 ORF61743 - 0.02 13.9 1.8 0.025 13.6 1.8 1.2 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) Pept_S41_N PF18294.1 ORF61743 - 0.11 12.5 1.7 0.17 11.9 0.9 1.8 2 0 0 2 2 2 0 Peptidase S41 N-terminal domain TPR_16 PF13432.6 ORF61743 - 0.26 12.0 7.8 2 9.1 0.9 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF61743 - 0.32 11.6 17.3 2.3 8.8 0.7 3.3 1 1 2 3 3 3 0 Tetratricopeptide repeat VMA21 PF09446.10 ORF61743 - 0.37 10.9 1.6 4.8 7.4 1.6 2.2 1 1 0 1 1 1 0 VMA21-like domain TPR_20 PF14561.6 ORF61743 - 0.4 11.0 8.0 0.63 10.4 0.3 2.8 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF61743 - 0.61 10.8 7.3 1.9 9.3 0.5 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF61743 - 0.64 10.0 5.3 3.5 7.6 0.4 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat GST_C_3 PF14497.6 ORF60177 - 2.4e-13 50.1 0.0 3.9e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF60177 - 1.5e-11 44.4 0.0 2.4e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF60177 - 1.1e-07 32.0 0.0 2.3e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF60177 - 1.8e-05 24.5 0.0 3.4e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF60177 - 9.6e-05 22.3 0.0 0.00016 21.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF60177 - 0.0096 16.3 0.0 0.028 14.8 0.0 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Tom37 PF10568.9 ORF60177 - 0.074 13.4 0.0 3.1 8.1 0.0 2.2 2 0 0 2 2 2 0 Outer mitochondrial membrane transport complex protein Defensin_3 PF08131.11 ORF55766 - 1.2 9.3 9.5 0.7 10.1 7.3 1.7 2 0 0 2 2 2 0 Defensin-like peptide family RFX_DNA_binding PF02257.15 ORF55407 - 0.019 15.6 0.3 0.099 13.3 0.0 2.1 2 0 0 2 2 2 0 RFX DNA-binding domain DUF2192 PF09958.9 ORF55407 - 0.04 13.4 0.6 0.057 12.9 0.6 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2192) DUF5641 PF18701.1 ORF55407 - 0.065 13.4 0.5 1.8 8.8 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5641) Arrestin_C PF02752.22 ORF54001 - 0.00051 20.5 0.1 0.00073 20.0 0.1 1.3 1 0 0 1 1 1 1 Arrestin (or S-antigen), C-terminal domain Pox_L5 PF04872.13 ORF52998 - 0.044 13.7 1.4 0.13 12.2 0.2 2.1 2 0 0 2 2 2 0 Poxvirus L5 protein family ZYG-11_interact PF05884.12 ORF52998 - 0.099 12.0 0.9 0.15 11.4 0.9 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 FliS PF02561.14 ORF52998 - 0.18 12.1 3.0 0.66 10.3 0.1 2.4 2 0 0 2 2 2 0 Flagellar protein FliS Tex_N PF09371.10 ORF52998 - 0.24 11.1 2.9 0.94 9.1 2.9 2.2 1 1 0 1 1 1 0 Tex-like protein N-terminal domain Turandot PF07240.11 ORF52998 - 2.3 8.3 6.1 6.3 6.8 0.1 3.4 3 2 1 4 4 4 0 Stress-inducible humoral factor Turandot PdaC PF13739.6 ORF52998 - 9.2 7.3 10.1 6.7 7.8 7.0 2.4 1 1 1 2 2 2 0 Deacetylase PdaC Hexapep_loop PF18776.1 ORF521 - 7.3 6.3 8.1 18 5.1 0.1 3.2 4 0 0 4 4 4 0 Hexapeptide repeat including loop OMPdecase PF00215.24 ORF51086 - 1.2e-25 90.4 0.1 1.4e-25 90.2 0.1 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family CUE PF02845.16 ORF50637 - 6.5e-08 32.1 0.1 1e-07 31.5 0.1 1.4 1 0 0 1 1 1 1 CUE domain BUD22 PF09073.10 ORF50637 - 0.1 12.0 25.2 0.13 11.6 25.2 1.1 1 0 0 1 1 1 0 BUD22 DUF2457 PF10446.9 ORF50637 - 0.37 9.9 25.8 0.54 9.3 25.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF4834 PF16118.5 ORF50637 - 0.89 10.6 15.7 0.96 10.5 3.4 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) LAP1C PF05609.12 ORF50637 - 1.1 8.3 19.0 1.3 8.0 19.0 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) CBF PF03914.17 ORF50637 - 9 6.3 6.7 2.4 8.2 1.1 2.1 2 0 0 2 2 2 0 CBF/Mak21 family RPN2_C PF18004.1 ORF50637 - 9.4 6.1 20.1 4.4 7.2 9.3 2.2 2 0 0 2 2 2 0 26S proteasome regulatory subunit RPN2 C-terminal domain MORN PF02493.20 ORF50423 - 9e-27 91.3 20.6 0.00027 20.7 0.3 8.3 9 0 0 9 9 9 6 MORN repeat AMP-binding PF00501.28 ORF49628 - 1.7e-10 40.1 0.7 2.7e-10 39.5 0.7 1.3 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 ORF49628 - 1.4e-05 25.3 0.0 2.1e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF1615 PF07759.12 ORF49123 - 6.2e-99 331.2 0.0 7e-99 331.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1615) Pro_CA PF00484.19 ORF47305 - 2.1e-50 171.1 0.0 2.6e-50 170.8 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase mono-CXXC PF15626.6 ORF4697 - 0.021 15.1 4.3 0.021 15.1 4.3 2.6 2 2 1 3 3 3 0 single CXXC unit DrsE PF02635.15 ORF42827 - 0.079 13.3 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 DsrE/DsrF-like family DUF2070 PF09843.9 ORF41429 - 0.051 11.9 3.7 0.059 11.7 3.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MARVEL PF01284.23 ORF41429 - 1.7 8.6 17.5 0.046 13.7 7.7 2.6 1 1 2 3 3 3 0 Membrane-associating domain LRR19-TM PF15176.6 ORF41046 - 0.35 10.9 0.0 0.35 10.9 0.0 2.5 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain Pkinase PF00069.25 ORF40743 - 3.2e-28 98.8 0.1 3.6e-28 98.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF40743 - 3.5e-21 75.6 0.1 4.3e-21 75.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF40743 - 2e-06 26.8 0.0 2e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF40743 - 0.00062 19.8 0.0 0.002 18.1 0.0 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF40743 - 0.039 12.9 0.1 0.049 12.6 0.1 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Topoisom_bac PF01131.20 ORF40743 - 0.052 12.5 0.1 0.075 12.0 0.1 1.2 1 0 0 1 1 1 0 DNA topoisomerase Kinase-like PF14531.6 ORF40743 - 0.077 12.3 0.1 8.3 5.6 0.0 2.1 2 0 0 2 2 2 0 Kinase-like ABC1 PF03109.16 ORF40743 - 0.16 12.2 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 ABC1 family UL141 PF16758.5 ORF40486 - 0.083 12.6 0.2 0.12 12.0 0.2 1.3 1 0 0 1 1 1 0 Herpes-like virus membrane glycoprotein UL141 CoA_trans PF01144.23 ORF39554 - 7.3e-71 238.0 0.1 8.2e-71 237.8 0.1 1.0 1 0 0 1 1 1 1 Coenzyme A transferase AcetylCoA_hydro PF02550.15 ORF39554 - 0.11 12.4 0.0 0.25 11.3 0.0 1.6 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase N-terminal domain Ras PF00071.22 ORF37762 - 6.2e-23 81.2 1.6 7.4e-23 80.9 1.6 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF37762 - 1.3e-14 54.5 0.6 1.9e-14 53.9 0.6 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF37762 - 8.3e-09 35.1 0.2 9.7e-09 34.9 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF37762 - 4.1e-08 33.3 0.1 5.9e-08 32.8 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF37762 - 3.3e-05 24.5 0.3 4e-05 24.2 0.3 1.2 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF37762 - 5.9e-05 23.0 0.2 0.012 15.5 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 ORF37762 - 0.00016 21.3 0.1 0.00033 20.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain GTP_EFTU PF00009.27 ORF37762 - 0.0017 18.0 1.4 0.05 13.1 1.4 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 ORF37762 - 0.0036 17.4 0.2 0.23 11.5 0.2 2.3 1 1 1 2 2 2 1 Dynamin family SMC_N PF02463.19 ORF37762 - 0.0061 16.0 0.2 0.01 15.3 0.2 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 ORF37762 - 0.0067 17.0 0.2 0.0085 16.6 0.2 1.5 1 1 0 1 1 1 1 ABC transporter RNA_helicase PF00910.22 ORF37762 - 0.0068 16.8 0.2 0.015 15.7 0.2 1.6 1 1 0 1 1 1 1 RNA helicase dNK PF01712.19 ORF37762 - 0.0095 15.8 0.3 0.13 12.1 0.1 2.1 2 0 0 2 2 2 1 Deoxynucleoside kinase IIGP PF05049.13 ORF37762 - 0.013 14.6 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA_21 PF13304.6 ORF37762 - 0.03 14.1 0.0 0.038 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system PRK PF00485.18 ORF37762 - 0.031 14.0 0.1 0.066 13.0 0.1 1.5 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 ORF37762 - 0.11 12.4 0.0 0.3 11.0 0.0 1.7 2 0 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 ORF37762 - 0.15 12.3 0.0 0.23 11.7 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF37762 - 0.19 12.0 0.2 5.8 7.1 0.0 2.0 1 1 0 1 1 1 0 AAA domain Mito_carr PF00153.27 ORF36444 - 2.2e-38 130.1 0.1 8.2e-18 64.1 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein Serine_protease PF18405.1 ORF36444 - 0.19 10.9 1.4 15 4.6 0.1 2.5 1 1 1 3 3 3 0 Gammaproteobacterial serine protease DUF4100 PF13352.6 ORF3374 - 0.12 12.2 0.3 0.16 11.7 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4100) PI3K_1B_p101 PF10486.9 ORF31479 - 0.2 9.4 3.1 0.21 9.3 3.1 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit uDENN PF03456.18 ORF30684 - 0.015 16.0 0.1 0.032 15.0 0.1 1.5 1 0 0 1 1 1 0 uDENN domain S_layer_N PF05123.12 ORF30684 - 0.1 12.4 5.3 0.091 12.6 3.4 1.7 1 1 1 2 2 2 0 S-layer like family, N-terminal region Bestrophin PF01062.21 ORF29912 - 0.0001 21.8 1.2 0.00014 21.4 1.2 1.2 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel BRCT_2 PF16589.5 ORF24400 - 0.0087 16.5 0.2 0.42 11.1 0.0 2.5 2 0 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain DUF3139 PF11337.8 ORF24400 - 0.076 13.7 4.0 0.087 13.5 2.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) Ank_3 PF13606.6 ORF24400 - 0.08 13.5 0.5 0.38 11.5 0.1 2.3 2 0 0 2 2 2 0 Ankyrin repeat DUF4282 PF14110.6 ORF23878 - 0.024 15.4 0.2 0.047 14.4 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) Pox_L5 PF04872.13 ORF2316 - 0.044 13.7 1.4 0.13 12.2 0.2 2.1 2 0 0 2 2 2 0 Poxvirus L5 protein family ZYG-11_interact PF05884.12 ORF2316 - 0.099 12.0 0.9 0.15 11.4 0.9 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 FliS PF02561.14 ORF2316 - 0.18 12.1 3.0 0.66 10.3 0.1 2.4 2 0 0 2 2 2 0 Flagellar protein FliS Tex_N PF09371.10 ORF2316 - 0.24 11.1 2.9 0.94 9.1 2.9 2.2 1 1 0 1 1 1 0 Tex-like protein N-terminal domain Turandot PF07240.11 ORF2316 - 2.3 8.3 6.1 6.3 6.8 0.1 3.4 3 2 1 4 4 4 0 Stress-inducible humoral factor Turandot PdaC PF13739.6 ORF2316 - 9.2 7.3 10.1 6.7 7.8 7.0 2.4 1 1 1 2 2 2 0 Deacetylase PdaC APS_kinase PF01583.20 ORF22100 - 1.1e-72 243.1 0.0 1.4e-72 242.7 0.0 1.1 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.6 ORF22100 - 6.2e-07 29.7 0.0 1.6e-06 28.3 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF22100 - 8.9e-06 26.3 0.1 3e-05 24.5 0.0 1.8 1 1 0 2 2 2 1 AAA domain KTI12 PF08433.10 ORF22100 - 0.0024 17.4 0.0 0.0035 16.8 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_29 PF13555.6 ORF22100 - 0.0031 17.2 0.0 0.0059 16.3 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain CbiA PF01656.23 ORF22100 - 0.0031 17.6 0.0 0.0047 17.0 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 ORF22100 - 0.0072 16.7 0.5 0.013 15.9 0.5 1.7 1 1 0 1 1 1 1 AAA ATPase domain ParA PF10609.9 ORF22100 - 0.014 14.9 0.1 0.019 14.4 0.1 1.2 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase SRP54 PF00448.22 ORF22100 - 0.014 15.0 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 ORF22100 - 0.03 14.1 0.0 0.046 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 ORF22100 - 0.044 13.5 0.0 0.086 12.6 0.0 1.5 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Torsin PF06309.11 ORF22100 - 0.049 13.7 0.1 0.12 12.4 0.0 1.6 2 0 0 2 2 2 0 Torsin MeaB PF03308.16 ORF22100 - 0.053 12.5 0.0 0.086 11.8 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_17 PF13207.6 ORF22100 - 0.082 13.3 0.0 0.16 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF22100 - 0.11 11.8 0.0 0.18 11.1 0.0 1.4 1 1 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 ORF22100 - 0.11 13.0 0.0 0.18 12.3 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_22 PF13401.6 ORF22100 - 0.12 12.7 0.1 0.24 11.7 0.0 1.5 2 0 0 2 2 1 0 AAA domain ATP_bind_1 PF03029.17 ORF22100 - 0.18 11.6 0.1 0.34 10.6 0.1 1.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 ORF22100 - 0.23 11.9 0.1 0.55 10.6 0.0 1.6 2 0 0 2 2 1 0 RNA helicase Pap_E4 PF02711.14 ORF17419 - 1.1 10.3 5.7 5.7 8.0 0.9 2.3 2 0 0 2 2 2 0 E4 protein PBP1_TM PF14812.6 ORF17018 - 0.56 10.6 4.0 0.23 11.8 1.0 1.9 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal RVT_N PF13655.6 ORF16282 - 0.0062 16.8 1.6 0.0079 16.4 0.3 1.8 2 0 0 2 2 1 1 N-terminal domain of reverse transcriptase FlxA PF14282.6 ORF16282 - 0.0097 15.9 9.5 0.017 15.1 7.2 2.3 2 1 0 2 2 2 1 FlxA-like protein Vps54_N PF10475.9 ORF16282 - 0.072 12.4 0.6 0.085 12.1 0.6 1.1 1 0 0 1 1 1 0 Vacuolar-sorting protein 54, of GARP complex Arg_decarbox_C PF17944.1 ORF16282 - 0.092 13.3 0.6 0.4 11.3 0.2 2.3 2 0 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension DUF948 PF06103.11 ORF16282 - 0.16 12.2 1.6 0.36 11.1 1.2 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF3037 PF11236.8 ORF16282 - 0.26 11.7 2.4 0.93 9.9 0.6 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF3037) PHM7_cyt PF14703.6 ORF16282 - 0.61 10.3 4.5 0.54 10.5 1.6 2.0 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Spc7 PF08317.11 ORF16282 - 5.5 5.8 14.2 0.34 9.8 8.0 1.8 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF1090 PF06476.12 ORF16282 - 6 7.0 12.1 0.26 11.4 4.1 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF1090) FlgN PF05130.12 ORF16282 - 6.5 7.3 11.5 2e+02 2.4 11.5 2.3 1 1 0 1 1 1 0 FlgN protein HIP1_clath_bdg PF16515.5 ORF16282 - 7.2 7.3 15.5 1.1 9.9 7.7 2.4 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 YkyA PF10368.9 ORF16282 - 7.9 6.1 12.2 1.4 8.5 7.6 1.8 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein TauE PF01925.19 ORF16150 - 0.012 15.3 0.7 0.016 14.8 0.7 1.1 1 0 0 1 1 1 0 Sulfite exporter TauE/SafE MORN PF02493.20 ORF15225 - 0.00022 20.9 5.9 0.01 15.7 0.7 3.9 4 0 0 4 4 4 2 MORN repeat SRI PF08236.11 ORF15150 - 0.045 13.9 7.1 0.081 13.1 0.1 2.7 3 0 0 3 3 3 0 SRI (Set2 Rpb1 interacting) domain STIMATE PF12400.8 ORF150293 - 2.2e-32 112.3 11.2 2.8e-32 111.9 11.2 1.1 1 0 0 1 1 1 1 STIMATE family Bac_export_2 PF01312.19 ORF150293 - 0.042 13.1 5.0 0.051 12.8 5.0 1.2 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family zf-C2H2_11 PF16622.5 ORF147908 - 0.046 13.5 0.1 0.088 12.6 0.1 1.4 1 0 0 1 1 1 0 zinc-finger C2H2-type zf-C2H2 PF00096.26 ORF147908 - 0.12 12.8 0.2 0.28 11.7 0.2 1.6 1 0 0 1 1 1 0 Zinc finger, C2H2 type DUF3139 PF11337.8 ORF140986 - 0.19 12.4 2.2 0.79 10.4 0.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF4829 PF16111.5 ORF140986 - 2.6 8.9 6.8 2 9.2 2.8 2.4 1 1 2 3 3 3 0 Domain of unknown function (DUF4829) SANT_DAMP1_like PF16282.5 ORF140630 - 0.018 15.2 5.4 4.2 7.6 0.2 3.4 1 1 2 3 3 3 0 SANT/Myb-like domain of DAMP1 NMT PF01233.19 ORF140630 - 0.026 14.4 2.9 0.075 12.9 2.3 1.9 1 1 1 2 2 2 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Shadoo PF14999.6 ORF139951 - 0.015 15.4 1.2 0.031 14.4 1.2 1.6 1 0 0 1 1 1 0 Shadow of prion protein, neuroprotective PEX11 PF05648.14 ORF137950 - 4.1e-14 52.6 1.2 7e-07 28.9 0.0 2.0 1 1 1 2 2 2 2 Peroxisomal biogenesis factor 11 (PEX11) Rieske_2 PF13806.6 ORF137129 - 1.6e-19 69.8 0.0 2.6e-19 69.1 0.0 1.4 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain FKBP26_C PF18046.1 ORF137129 - 0.0021 18.1 0.0 0.0035 17.4 0.0 1.3 1 0 0 1 1 1 1 FKBP26_C-terminal Lipase_C PF18067.1 ORF131209 - 0.064 13.8 0.0 0.12 13.0 0.0 1.5 1 0 0 1 1 1 0 Lipase C-terminal domain Nucleoporin2 PF04096.14 ORF131209 - 0.085 13.0 4.0 3 8.0 0.5 2.3 2 0 0 2 2 2 0 Nucleoporin autopeptidase FYVE PF01363.21 ORF129258 - 7.1e-13 48.5 16.6 1.3e-12 47.6 16.6 1.4 1 0 0 1 1 1 1 FYVE zinc finger zf-B_box PF00643.24 ORF129258 - 4.6 7.5 16.3 16 5.8 12.4 2.9 2 1 0 2 2 2 0 B-box zinc finger Methyltransf_31 PF13847.6 ORF128933 - 1.3e-15 57.5 1.1 1.8e-15 57.1 1.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF128933 - 2.9e-11 43.9 0.0 5.7e-11 43.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF128933 - 6e-11 43.0 0.2 1.3e-10 41.9 0.2 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF128933 - 4.4e-08 33.1 0.1 5.3e-08 32.9 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 ORF128933 - 5.7e-07 29.4 0.0 1.2e-06 28.4 0.0 1.6 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_11 PF08241.12 ORF128933 - 6.9e-07 29.8 0.0 1.2e-06 29.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF128933 - 2.5e-05 23.9 0.1 3.2e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 ORF128933 - 3.9e-05 23.2 0.5 8.3e-05 22.1 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_18 PF12847.7 ORF128933 - 0.00037 20.5 0.9 0.0006 19.8 0.9 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 ORF128933 - 0.00068 19.6 0.3 0.00094 19.2 0.3 1.4 1 1 0 1 1 1 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 ORF128933 - 0.0076 15.3 0.5 0.018 14.0 0.1 1.7 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase MetW PF07021.12 ORF128933 - 0.0093 15.6 0.2 0.014 15.0 0.2 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW NodS PF05401.11 ORF128933 - 0.015 14.9 0.1 0.019 14.6 0.1 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) AviRa PF11599.8 ORF128933 - 0.078 12.4 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 RRNA methyltransferase AviRa Methyltransf_24 PF13578.6 ORF126339 - 4.1e-08 34.2 0.0 6.2e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF126339 - 9.5e-08 32.7 0.0 1.9e-07 31.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF126339 - 4.6e-06 27.3 0.0 6.7e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF126339 - 7.1e-06 26.6 0.0 1.4e-05 25.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF126339 - 9.5e-06 25.5 0.0 1.2e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF126339 - 0.0041 16.7 0.0 0.0056 16.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 ORF126339 - 0.061 13.2 0.0 0.083 12.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain FGF PF00167.18 ORF125337 - 0.032 14.3 0.0 0.99 9.5 0.0 2.4 2 1 0 2 2 2 0 Fibroblast growth factor Ras PF00071.22 ORF12470 - 7.7e-22 77.6 0.0 9.8e-22 77.3 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF12470 - 0.00025 21.2 0.0 0.00037 20.7 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF12470 - 0.026 14.0 0.0 0.038 13.5 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family U71 PF17474.2 ORF124019 - 0.11 12.4 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Tegument protein UL11 homolog PI3K_1B_p101 PF10486.9 ORF12334 - 0.31 8.8 2.1 0.32 8.7 2.1 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit DUF3139 PF11337.8 ORF119402 - 0.26 12.0 2.6 0.8 10.4 0.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF4829 PF16111.5 ORF119402 - 4.3 8.1 7.0 1.7 9.5 2.6 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4829) Homeodomain PF00046.29 ORF118483 - 9e-08 31.9 3.0 2.3e-07 30.6 3.0 1.7 1 0 0 1 1 1 1 Homeodomain DUF4672 PF15716.5 ORF118483 - 2 8.0 4.1 1.7 8.2 0.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4672) RVT_1 PF00078.27 ORF114837 - 0.00061 19.4 0.0 0.00075 19.1 0.0 1.2 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) XPG_N PF00752.17 ORF109531 - 1.2e-30 106.0 0.2 3.4e-30 104.5 0.0 1.8 2 0 0 2 2 2 1 XPG N-terminal domain Exonuc_VII_L PF02601.15 ORF109531 - 0.62 9.6 7.6 0.72 9.4 7.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit RNA_binding PF01877.17 ORF107704 - 0.14 12.4 6.1 3.2 8.1 1.4 2.5 2 1 0 2 2 2 0 RNA binding DUF3731 PF12531.8 ORF107704 - 1.6 8.5 3.9 3 7.6 0.1 2.4 1 1 1 3 3 3 0 DNA-K related protein UCH PF00443.29 ORF107704 - 4.2 6.8 12.3 0.35 10.3 2.0 2.1 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase DUF4140 PF13600.6 ORF107122 - 1.6 9.2 7.5 0.2 12.1 1.0 2.6 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Uds1 PF15456.6 ORF107122 - 2.2 8.5 7.1 0.49 10.6 2.5 2.1 2 0 0 2 2 2 0 Up-regulated During Septation DUF974 PF06159.13 ORF101686 - 0.098 12.4 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF974) Ank_4 PF13637.6 ORF10097 - 1.4e-07 31.9 0.1 0.73 10.5 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF10097 - 3.3e-06 27.6 0.0 0.41 11.3 0.0 3.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF10097 - 8.4e-06 25.8 1.2 7.9 7.4 0.0 5.0 5 0 0 5 5 5 2 Ankyrin repeat Ank PF00023.30 ORF10097 - 8.5e-06 26.0 0.0 0.0041 17.5 0.0 3.0 3 1 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF10097 - 0.0036 17.6 0.2 16 5.9 0.0 3.3 3 0 0 3 3 3 1 Ankyrin repeats (many copies) YkuD PF03734.14 NODE_33180_length_655_cov_2.035484_g26405_i0forward_frame_1 - 8.8e-19 68.4 0.0 1.2e-18 67.9 0.0 1.2 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain LysM PF01476.20 NODE_33180_length_655_cov_2.035484_g26405_i0forward_frame_1 - 9.9e-11 41.5 0.0 2.3e-10 40.4 0.0 1.6 2 0 0 2 2 2 1 LysM domain FtsZ_C PF12327.8 NODE_33164_length_655_cov_62.150000_g26389_i0reverse_frame_1 - 0.017 15.4 0.0 0.042 14.1 0.0 1.5 1 0 0 1 1 1 0 FtsZ family, C-terminal domain FKBP_C PF00254.28 NODE_33128_length_655_cov_1118.220968_g26357_i0reverse_frame_1 - 8.9e-28 96.5 0.0 1.2e-27 96.0 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_N PF01346.18 NODE_33128_length_655_cov_1118.220968_g26357_i0reverse_frame_1 - 0.051 14.5 0.0 0.099 13.6 0.0 1.5 1 0 0 1 1 1 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HMG_box PF00505.19 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 4.2e-21 75.1 5.7 4.2e-17 62.3 0.9 2.3 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 1.1e-16 61.2 4.6 6.6e-12 45.8 0.7 2.3 2 0 0 2 2 2 2 HMG-box domain HMG_box_5 PF14887.6 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 0.0066 16.4 0.2 0.0066 16.4 0.2 1.8 2 0 0 2 2 2 1 HMG (high mobility group) box 5 Protamine_like PF06382.11 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 0.0096 16.1 3.0 0.25 11.5 0.2 2.2 2 0 0 2 2 2 2 Protamine and protamine like DUF3899 PF13038.6 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_1 - 5 7.7 9.9 0.25 11.9 3.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) TPPII_N PF12583.8 NODE_33081_length_657_cov_3.247588_g26317_i0forward_frame_1 - 0.37 11.4 3.3 0.55 10.8 3.3 1.2 1 0 0 1 1 1 0 Tripeptidyl peptidase II N terminal LRR_6 PF13516.6 NODE_33070_length_657_cov_93.086817_g26306_i0reverse_frame_1 - 3e-11 42.4 7.2 0.11 12.6 0.0 5.5 5 0 0 5 5 5 3 Leucine Rich repeat LRR_4 PF12799.7 NODE_33070_length_657_cov_93.086817_g26306_i0reverse_frame_1 - 6.6e-06 26.4 0.0 2.1 8.9 0.0 3.5 3 0 0 3 3 3 3 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_33070_length_657_cov_93.086817_g26306_i0reverse_frame_1 - 2.7e-05 24.1 0.1 13 6.8 0.0 5.0 5 0 0 5 5 5 1 Leucine Rich Repeat SAP PF02037.27 NODE_33070_length_657_cov_93.086817_g26306_i0reverse_frame_1 - 0.49 10.2 3.0 16 5.4 0.0 3.6 4 0 0 4 4 4 0 SAP domain Albumin_I PF08027.11 NODE_33070_length_657_cov_93.086817_g26306_i0forward_frame_1 - 0.046 13.3 0.4 0.046 13.3 0.4 2.5 2 0 0 2 2 2 0 Albumin I chain b SHMT PF00464.19 NODE_33038_length_658_cov_3.887640_g26277_i0forward_frame_2 - 0.095 11.3 0.1 0.13 10.9 0.1 1.1 1 0 0 1 1 1 0 Serine hydroxymethyltransferase Pentapeptide_2 PF01469.18 NODE_33020_length_658_cov_184.470305_g1699_i4reverse_frame_3 - 0.44 10.5 13.9 2 8.4 7.0 2.5 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks102.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks102.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks102.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks102.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:02:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pentapeptide PF00805.22 NODE_33020_length_658_cov_184.470305_g1699_i4reverse_frame_2 - 6.1 6.6 9.8 1 9.0 0.5 3.3 4 0 0 4 4 4 0 Pentapeptide repeats (8 copies) DUF3854 PF12965.7 NODE_33004_length_658_cov_27180.211878_g23263_i25reverse_frame_3 - 0.078 13.0 0.0 0.19 11.7 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3854) Bac_DnaA_C PF08299.11 NODE_33004_length_658_cov_27180.211878_g23263_i25reverse_frame_2 - 0.077 13.0 0.0 0.18 11.8 0.0 1.6 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix DUF5475 PF17569.2 NODE_32994_length_659_cov_78.251603_g26244_i0reverse_frame_2 - 0.033 14.5 0.2 0.073 13.4 0.2 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5475) COX7a PF02238.15 NODE_32994_length_659_cov_78.251603_g26244_i0forward_frame_3 - 0.059 13.8 1.8 1.1 9.7 0.0 3.0 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VII PDZ_6 PF17820.1 NODE_32992_length_659_cov_81.615385_g26243_i0forward_frame_2 - 0.0011 18.8 0.0 0.0029 17.4 0.0 1.8 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 NODE_32992_length_659_cov_81.615385_g26243_i0forward_frame_2 - 0.031 14.6 0.0 0.08 13.3 0.0 1.7 2 0 0 2 2 2 0 PDZ domain PDZ_2 PF13180.6 NODE_32992_length_659_cov_81.615385_g26243_i0forward_frame_2 - 0.042 14.2 0.0 0.077 13.3 0.0 1.5 1 0 0 1 1 1 0 PDZ domain Auto_anti-p27 PF06677.12 NODE_32940_length_660_cov_142.760000_g26194_i0reverse_frame_2 - 2.3e-12 46.8 8.2 3.7e-12 46.2 8.2 1.4 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Lzipper-MIP1 PF14389.6 NODE_32940_length_660_cov_142.760000_g26194_i0reverse_frame_2 - 0.16 12.3 1.1 7.8 6.9 0.2 2.3 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 Cadherin_C_2 PF16492.5 NODE_32940_length_660_cov_142.760000_g26194_i0forward_frame_2 - 0.14 12.9 0.1 0.14 12.9 0.1 2.1 2 1 0 2 2 2 0 Cadherin cytoplasmic C-terminal Crust_neurohorm PF01147.17 NODE_32933_length_660_cov_164.131200_g26188_i0reverse_frame_3 - 0.019 14.8 13.0 0.35 10.7 2.5 2.5 2 0 0 2 2 2 0 Crustacean CHH/MIH/GIH neurohormone family FhuF_C PF11575.8 NODE_32933_length_660_cov_164.131200_g26188_i0forward_frame_3 - 0.14 12.2 0.2 0.14 12.2 0.2 3.2 3 0 0 3 3 3 0 FhuF 2Fe-2S C-terminal domain OGFr_III PF04680.13 NODE_32933_length_660_cov_164.131200_g26188_i0forward_frame_2 - 0.21 12.2 8.9 5.3 7.8 0.4 4.5 4 3 0 4 4 4 0 Opioid growth factor receptor repeat DUF802 PF05650.11 ORF99491 - 0.026 15.0 1.3 0.061 13.8 1.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF802) DAO_C PF16901.5 ORF99491 - 0.066 13.1 0.1 1.1 9.2 0.0 2.1 2 0 0 2 2 2 0 C-terminal domain of alpha-glycerophosphate oxidase HTH_Tnp_IS630 PF01710.16 ORF93374 - 0.022 14.8 3.8 0.022 14.8 3.8 2.7 1 1 2 3 3 3 0 Transposase FPP PF05911.11 ORF93374 - 0.036 12.3 28.0 0.048 11.9 28.0 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil DUF3450 PF11932.8 ORF93374 - 0.32 10.2 27.8 0.021 14.1 13.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) DUF3584 PF12128.8 ORF93374 - 0.51 7.8 31.4 0.46 7.9 24.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) DUF745 PF05335.13 ORF93374 - 0.61 9.8 19.1 0.16 11.6 15.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) CC2-LZ PF16516.5 ORF93374 - 0.67 10.4 27.2 0.081 13.3 5.5 3.4 1 1 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator APG6_N PF17675.1 ORF93374 - 1.3 9.5 35.1 0.19 12.2 2.9 3.1 1 1 2 3 3 3 0 Apg6 coiled-coil region Lebercilin PF15619.6 ORF93374 - 2.1 7.9 40.0 0.11 12.1 14.3 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Fez1 PF06818.15 ORF93374 - 3.1 8.2 28.4 2 8.8 2.2 2.1 1 1 1 2 2 2 0 Fez1 DHR10 PF18595.1 ORF93374 - 4 7.5 32.2 0.99 9.5 8.5 3.9 1 1 3 4 4 4 0 Designed helical repeat protein 10 domain TraF_2 PF13729.6 ORF93374 - 5 6.4 11.6 0.52 9.6 6.4 1.8 1 1 0 1 1 1 0 F plasmid transfer operon, TraF, protein Striatin PF08232.12 ORF93374 - 8.6 6.9 22.7 1.5 9.4 18.0 2.0 1 1 1 2 2 2 0 Striatin family YscO PF07321.12 ORF93374 - 9.9 6.1 26.8 0.78 9.7 1.3 2.8 1 1 2 3 3 3 0 Type III secretion protein YscO SIR2 PF02146.17 ORF91909 - 8.9e-33 113.7 0.0 1.1e-32 113.4 0.0 1.1 1 0 0 1 1 1 1 Sir2 family zf-TFIIB PF13453.6 ORF91909 - 0.00081 18.7 1.8 0.0013 18.0 1.8 1.4 1 0 0 1 1 1 1 Transcription factor zinc-finger PhnA_Zn_Ribbon PF08274.12 ORF91909 - 0.01 15.8 1.4 0.017 15.0 1.4 1.4 1 0 0 1 1 1 0 PhnA Zinc-Ribbon Lar_restr_allev PF14354.6 ORF91909 - 0.054 13.9 1.5 0.12 12.8 1.5 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar Zn_ribbon_SprT PF17283.2 ORF91909 - 0.1 12.5 0.7 0.19 11.7 0.7 1.4 1 0 0 1 1 1 0 SprT-like zinc ribbon domain MT PF12777.7 ORF91909 - 0.12 11.3 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Microtubule-binding stalk of dynein motor Zn_Tnp_IS1595 PF12760.7 ORF91909 - 0.16 12.0 3.6 0.19 11.7 1.5 2.0 2 0 0 2 2 2 0 Transposase zinc-ribbon domain OS-D PF03392.13 ORF91909 - 0.98 9.6 4.3 2.8 8.1 2.9 2.2 1 1 1 2 2 2 0 Insect pheromone-binding family, A10/OS-D Actin PF00022.19 ORF91839 - 8.2e-52 176.2 0.0 4.1e-51 173.9 0.0 1.8 1 1 0 1 1 1 1 Actin DUF5549 PF17703.1 ORF90860 - 4.9 6.8 8.5 0.9 9.2 4.5 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5549) She9_MDM33 PF05546.11 ORF90179 - 0.0024 17.7 1.6 0.0041 16.9 1.6 1.3 1 0 0 1 1 1 1 She9 / Mdm33 family FliD_C PF07195.12 ORF90179 - 0.017 14.5 1.4 0.03 13.8 1.4 1.3 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus bZIP_1 PF00170.21 ORF90179 - 0.032 14.3 2.1 0.12 12.5 2.1 2.0 1 0 0 1 1 1 0 bZIP transcription factor DivIC PF04977.15 ORF90179 - 0.11 12.3 0.1 0.24 11.2 0.1 1.6 1 0 0 1 1 1 0 Septum formation initiator CBAH PF02275.18 ORF87184 - 2.7e-11 43.7 0.0 3.4e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family OmpA PF00691.20 ORF86814 - 9.3e-23 80.4 0.1 1.3e-22 80.0 0.1 1.2 1 0 0 1 1 1 1 OmpA family Gly-zipper_Omp PF13488.6 ORF86814 - 2.4e-10 40.2 14.3 2.4e-10 40.2 14.3 1.9 2 0 0 2 2 2 1 Glycine zipper Gly-zipper_YMGG PF13441.6 ORF86814 - 2.9e-08 33.3 16.4 7.7e-08 32.0 16.4 1.8 1 0 0 1 1 1 1 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 ORF86814 - 0.00018 21.3 18.9 0.00018 21.3 18.9 2.0 2 0 0 2 2 2 1 Glycine zipper 2TM domain YtxH PF12732.7 ORF86814 - 0.81 10.3 8.7 8.3 7.0 1.1 2.6 2 0 0 2 2 2 0 YtxH-like protein DUF1269 PF06897.12 ORF86814 - 5.3 7.4 11.0 16 5.9 3.2 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1269) Prok-RING_4 PF14447.6 ORF86544 - 6e-07 29.2 7.8 6e-07 29.2 7.8 3.3 3 0 0 3 3 3 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF86544 - 6.3e-05 22.8 8.1 6.3e-05 22.8 8.1 3.3 4 0 0 4 4 4 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF86544 - 0.00045 20.5 7.0 0.00045 20.5 7.0 3.6 3 1 1 4 4 4 1 Ring finger domain zf-C3HC4 PF00097.25 ORF86544 - 0.00046 20.0 8.6 0.00046 20.0 8.6 3.4 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) IBR PF01485.21 ORF86544 - 0.0015 18.7 13.3 0.0015 18.7 13.3 3.8 2 1 1 3 3 3 1 IBR domain, a half RING-finger domain zf-RING_14 PF17978.1 ORF86544 - 0.0037 17.6 1.7 0.0037 17.6 1.7 2.3 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain C1_4 PF07975.12 ORF86544 - 0.0041 17.3 1.1 0.0041 17.3 1.1 4.3 4 1 0 4 4 3 1 TFIIH C1-like domain zinc_ribbon_5 PF13719.6 ORF86544 - 0.3 10.9 11.2 1.4 8.7 4.9 3.3 2 0 0 2 2 2 0 zinc-ribbon domain Mu-like_Com PF10122.9 ORF86544 - 0.33 10.4 9.6 2 7.9 1.4 2.5 2 0 0 2 2 2 0 Mu-like prophage protein Com FYVE_2 PF02318.16 ORF86544 - 1.1 9.5 22.6 0.5 10.6 6.0 2.9 2 2 0 2 2 2 0 FYVE-type zinc finger zf-C3HC4_2 PF13923.6 ORF86544 - 6.1 6.8 25.0 0.75 9.7 8.8 3.4 3 1 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) SET PF00856.28 ORF83836 - 9.1e-08 32.7 0.1 1.5e-05 25.5 0.1 2.2 1 1 0 1 1 1 1 SET domain ERM PF00769.19 ORF81606 - 0.59 9.9 12.8 0.87 9.4 12.8 1.3 1 0 0 1 1 1 0 Ezrin/radixin/moesin family DUF3114 PF11311.8 ORF80144 - 0.12 11.9 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3114) Spore_GerAC PF05504.11 ORF80144 - 0.19 12.0 1.7 0.28 11.4 1.7 1.3 1 0 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal MGC-24 PF05283.11 ORF79671 - 1.4 9.4 8.7 0.52 10.7 5.9 1.7 1 1 1 2 2 2 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Pro_isomerase PF00160.21 ORF77501 - 2.3e-45 154.7 0.0 2.7e-45 154.5 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Formyl_trans_N PF00551.19 ORF73467 - 0.25 11.0 0.0 0.37 10.5 0.0 1.2 1 0 0 1 1 1 0 Formyl transferase cNMP_binding PF00027.29 ORF67407 - 1.9e-10 40.7 0.0 2.9e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Lar_restr_allev PF14354.6 ORF66971 - 0.59 10.6 3.3 1 9.8 3.3 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar NADH_dehy_S2_C PF06444.11 ORF61796 - 0.073 13.6 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus Defensin_big PF14862.6 ORF61796 - 5.1 7.5 9.1 15 6.0 4.8 3.2 2 2 0 2 2 2 0 Big defensin DUF346 PF03984.13 ORF61796 - 6 6.7 6.9 1.3 8.8 0.1 2.8 3 0 0 3 3 3 0 Repeat of unknown function (DUF346) CAT PF00302.18 ORF61254 - 1e-101 339.0 7.9 1.2e-101 338.9 7.9 1.0 1 0 0 1 1 1 1 Chloramphenicol acetyltransferase 2-oxoacid_dh PF00198.23 ORF61254 - 0.0044 16.5 0.1 1.8 7.9 0.1 2.1 2 0 0 2 2 2 2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Condensation PF00668.20 ORF61254 - 0.037 12.7 0.1 0.11 11.2 0.0 1.8 2 0 0 2 2 2 0 Condensation domain ERM PF00769.19 ORF61000 - 0.59 9.9 12.8 0.87 9.4 12.8 1.3 1 0 0 1 1 1 0 Ezrin/radixin/moesin family HTH_Tnp_IS630 PF01710.16 ORF60849 - 0.022 14.8 3.8 0.022 14.8 3.8 2.7 1 1 2 3 3 3 0 Transposase FPP PF05911.11 ORF60849 - 0.036 12.3 28.0 0.048 11.9 28.0 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil DUF3450 PF11932.8 ORF60849 - 0.32 10.2 27.8 0.021 14.1 13.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) DUF3584 PF12128.8 ORF60849 - 0.51 7.8 31.4 0.46 7.9 24.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) DUF745 PF05335.13 ORF60849 - 0.61 9.8 19.1 0.16 11.6 15.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) CC2-LZ PF16516.5 ORF60849 - 0.67 10.4 27.2 0.081 13.3 5.5 3.4 1 1 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator APG6_N PF17675.1 ORF60849 - 1.3 9.5 35.1 0.19 12.2 2.9 3.1 1 1 2 3 3 3 0 Apg6 coiled-coil region Lebercilin PF15619.6 ORF60849 - 2.1 7.9 40.0 0.11 12.1 14.3 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Fez1 PF06818.15 ORF60849 - 3.1 8.2 28.4 2 8.8 2.2 2.1 1 1 1 2 2 2 0 Fez1 DHR10 PF18595.1 ORF60849 - 4 7.5 32.2 0.99 9.5 8.5 3.9 1 1 3 4 4 4 0 Designed helical repeat protein 10 domain TraF_2 PF13729.6 ORF60849 - 5 6.4 11.6 0.52 9.6 6.4 1.8 1 1 0 1 1 1 0 F plasmid transfer operon, TraF, protein Striatin PF08232.12 ORF60849 - 8.6 6.9 22.7 1.5 9.4 18.0 2.0 1 1 1 2 2 2 0 Striatin family YscO PF07321.12 ORF60849 - 9.9 6.1 26.8 0.78 9.7 1.3 2.8 1 1 2 3 3 3 0 Type III secretion protein YscO THDPS_N_2 PF14805.6 ORF60399 - 0.029 14.6 0.3 0.097 12.9 0.1 2.0 1 1 1 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal ANAPC4 PF12896.7 ORF60399 - 0.076 12.5 0.1 3.3 7.2 0.0 2.2 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 4 EF-hand_like PF09279.11 ORF60399 - 0.17 12.4 2.0 0.18 12.3 0.3 1.9 2 0 0 2 2 2 0 Phosphoinositide-specific phospholipase C, efhand-like TMF_DNA_bd PF12329.8 ORF60399 - 0.58 10.2 7.3 10 6.2 1.3 3.0 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Sec34 PF04136.15 ORF60399 - 0.59 10.0 4.1 2.6 7.9 0.1 2.7 2 1 1 3 3 3 0 Sec34-like family TPR_MLP1_2 PF07926.12 ORF60399 - 2.2 8.4 11.3 2 8.5 7.2 2.6 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein ZapB PF06005.12 ORF60399 - 5 7.6 12.0 0.17 12.4 0.9 2.9 3 0 0 3 3 3 0 Cell division protein ZapB FUSC PF04632.12 ORF60399 - 7.5 5.0 11.2 3.6 6.0 7.1 1.9 1 1 1 2 2 2 0 Fusaric acid resistance protein family YabA PF06156.13 ORF60399 - 9.8 6.9 8.3 9.8 6.9 0.4 2.8 1 1 2 3 3 3 0 Initiation control protein YabA SIR2 PF02146.17 ORF5962 - 6.9e-33 114.0 0.0 8.6e-33 113.7 0.0 1.1 1 0 0 1 1 1 1 Sir2 family zf-TFIIB PF13453.6 ORF5962 - 0.0013 18.0 1.8 0.0021 17.3 1.8 1.3 1 0 0 1 1 1 1 Transcription factor zinc-finger OS-D PF03392.13 ORF5962 - 0.0054 16.8 1.6 0.06 13.4 0.9 2.4 1 1 1 2 2 2 1 Insect pheromone-binding family, A10/OS-D PhnA_Zn_Ribbon PF08274.12 ORF5962 - 0.0088 16.0 1.8 0.015 15.2 1.8 1.4 1 0 0 1 1 1 1 PhnA Zinc-Ribbon Lar_restr_allev PF14354.6 ORF5962 - 0.066 13.6 1.4 0.14 12.5 1.4 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar MT PF12777.7 ORF5962 - 0.12 11.4 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Microtubule-binding stalk of dynein motor Zn_ribbon_SprT PF17283.2 ORF5962 - 0.18 11.7 0.8 0.32 11.0 0.8 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF5962 - 0.27 11.2 3.3 0.36 10.8 1.3 2.0 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-H2C2_2 PF13465.6 ORF5962 - 1.1 9.9 4.1 9.1 6.9 1.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain PP2C PF00481.21 ORF55219 - 9.6e-48 163.1 0.0 1.3e-47 162.6 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF55219 - 0.017 14.7 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein phosphatase 2C SpoIIE PF07228.12 ORF55219 - 0.04 13.8 0.0 0.77 9.6 0.0 2.0 2 0 0 2 2 2 0 Stage II sporulation protein E (SpoIIE) CxC2 PF18803.1 ORF55219 - 0.056 13.6 0.3 0.1 12.7 0.3 1.4 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases 4HFCP_synth PF04476.13 ORF55219 - 0.098 12.4 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 4-HFC-P synthase TMF_TATA_bd PF12325.8 ORF53771 - 0.03 14.5 4.5 0.03 14.5 4.5 2.3 2 1 0 3 3 3 0 TATA element modulatory factor 1 TATA binding Ank_4 PF13637.6 ORF53527 - 1e-11 45.1 0.3 4e-06 27.3 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF53527 - 1.9e-09 37.6 0.0 4.3e-09 36.5 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF53527 - 1e-08 35.6 0.1 2.4e-08 34.5 0.1 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF53527 - 1.9e-07 30.8 0.0 1.3e-06 28.3 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 ORF53527 - 9.2e-07 29.0 0.0 3.9e-06 27.1 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Telomere_res PF16684.5 ORF53527 - 0.02 14.4 2.4 0.032 13.7 2.4 1.3 1 0 0 1 1 1 0 Telomere resolvase DUF3537 PF12056.8 ORF53527 - 0.29 9.9 1.0 0.47 9.2 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3537) SET PF00856.28 ORF53213 - 1.4e-07 32.1 0.0 2.1e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 SET domain Mrx7 PF10906.8 ORF52648 - 0.024 14.9 0.1 0.048 13.9 0.1 1.6 1 0 0 1 1 1 0 MIOREX complex component 7 Acetyltransf_1 PF00583.25 ORF52088 - 0.039 14.2 0.6 0.98 9.7 0.1 2.4 2 1 0 2 2 2 0 Acetyltransferase (GNAT) family FR47 PF08445.10 ORF52088 - 0.1 12.5 0.0 18 5.4 0.0 2.4 2 0 0 2 2 2 0 FR47-like protein SNARE_assoc PF09335.11 ORF52077 - 1.5e-10 41.6 3.9 1.5e-10 41.6 3.9 1.7 2 1 0 2 2 2 1 SNARE associated Golgi protein DUF2975 PF11188.8 ORF52077 - 6.1e-06 26.2 0.5 1.2e-05 25.2 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2975) HECT PF00632.25 ORF51853 - 2.9e-40 138.7 0.1 3.7e-40 138.3 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Prok-RING_4 PF14447.6 ORF51317 - 6e-07 29.2 7.8 6e-07 29.2 7.8 3.3 3 0 0 3 3 3 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF51317 - 6.3e-05 22.8 8.1 6.3e-05 22.8 8.1 3.3 4 0 0 4 4 4 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF51317 - 0.00045 20.5 7.0 0.00045 20.5 7.0 3.6 3 1 1 4 4 4 1 Ring finger domain zf-C3HC4 PF00097.25 ORF51317 - 0.00046 20.0 8.6 0.00046 20.0 8.6 3.4 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) IBR PF01485.21 ORF51317 - 0.0015 18.7 13.3 0.0015 18.7 13.3 3.8 2 1 1 3 3 3 1 IBR domain, a half RING-finger domain zf-RING_14 PF17978.1 ORF51317 - 0.0037 17.6 1.7 0.0037 17.6 1.7 2.3 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain C1_4 PF07975.12 ORF51317 - 0.0041 17.3 1.1 0.0041 17.3 1.1 4.3 4 1 0 4 4 3 1 TFIIH C1-like domain zinc_ribbon_5 PF13719.6 ORF51317 - 0.3 10.9 11.2 1.4 8.7 4.9 3.3 2 0 0 2 2 2 0 zinc-ribbon domain Mu-like_Com PF10122.9 ORF51317 - 0.33 10.4 9.6 2 7.9 1.4 2.5 2 0 0 2 2 2 0 Mu-like prophage protein Com FYVE_2 PF02318.16 ORF51317 - 1.1 9.5 22.6 0.5 10.6 6.0 2.9 2 2 0 2 2 2 0 FYVE-type zinc finger zf-C3HC4_2 PF13923.6 ORF51317 - 6.1 6.8 25.0 0.75 9.7 8.8 3.4 3 1 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) DNA_pol_B_thumb PF14791.6 ORF50801 - 1.7e-12 47.3 0.0 2.9e-12 46.6 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase beta thumb YabA PF06156.13 ORF48812 - 0.16 12.6 5.5 0.88 10.2 1.1 2.5 2 1 0 2 2 2 0 Initiation control protein YabA UDG PF03167.19 ORF48405 - 0.029 14.4 0.0 0.048 13.7 0.0 1.3 1 0 0 1 1 1 0 Uracil DNA glycosylase superfamily MCM_bind PF09739.9 ORF48405 - 0.41 9.0 3.3 0.57 8.6 3.3 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Beach PF02138.18 ORF47072 - 3.1e-41 141.6 1.9 3.3e-41 141.5 1.9 1.0 1 0 0 1 1 1 1 Beige/BEACH domain zf-RING_2 PF13639.6 ORF40621 - 2.2e-13 50.3 11.8 2.2e-13 50.3 11.8 3.4 3 0 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF40621 - 1.1e-09 37.8 7.7 1.1e-09 37.8 7.7 4.2 5 0 0 5 5 5 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF40621 - 1.2e-07 31.9 10.8 1.2e-07 31.9 10.8 2.5 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF40621 - 3.7e-07 29.9 15.6 5.9e-07 29.2 11.7 2.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF40621 - 1e-06 28.7 3.6 1e-06 28.7 3.6 2.6 3 1 0 3 3 3 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF40621 - 9.5e-06 25.5 9.1 9.5e-06 25.5 9.1 3.4 5 0 0 5 5 5 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF40621 - 3.1e-05 23.7 10.8 3.1e-05 23.7 10.8 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF40621 - 0.00017 21.6 6.4 0.00017 21.6 6.4 2.3 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF40621 - 0.0043 16.9 12.6 0.016 15.0 12.6 2.0 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF40621 - 0.0081 16.0 11.4 0.0081 16.0 11.4 2.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF40621 - 0.026 14.2 9.5 0.026 14.2 9.5 2.4 3 0 0 3 3 3 0 Zinc-ribbon, C4HC2 type zf-Nse PF11789.8 ORF40621 - 0.14 12.0 5.9 0.32 10.8 5.9 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit FANCL_C PF11793.8 ORF40621 - 6.1 7.1 13.5 6.7 7.0 9.1 3.0 2 1 0 2 2 2 0 FANCL C-terminal domain Shadoo PF14999.6 ORF38841 - 9.1e-05 22.6 5.8 0.00016 21.8 5.8 1.4 1 0 0 1 1 1 1 Shadow of prion protein, neuroprotective Arf PF00025.21 ORF38038 - 4.7e-66 221.5 0.7 5.6e-66 221.3 0.7 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF38038 - 5.1e-13 49.3 0.1 7.2e-13 48.8 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF38038 - 9.1e-13 48.1 0.0 1.1e-12 47.9 0.0 1.1 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF38038 - 3.1e-12 46.3 0.1 3.9e-12 46.0 0.1 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF38038 - 1.3e-08 34.5 0.2 1.7e-08 34.1 0.2 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF38038 - 1.1e-06 28.7 0.1 1.7e-06 28.1 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF38038 - 9.4e-05 21.7 0.6 0.11 11.6 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit GTP_EFTU PF00009.27 ORF38038 - 0.0043 16.6 0.7 0.0075 15.8 0.2 1.4 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain NTPase_1 PF03266.15 ORF38038 - 0.075 12.9 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 NTPase 6PF2K PF01591.18 ORF38038 - 0.079 12.2 0.1 0.11 11.8 0.1 1.4 1 1 0 1 1 1 0 6-phosphofructo-2-kinase HPIP PF15226.6 ORF35728 - 0.11 13.0 0.3 0.17 12.3 0.3 1.3 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family Ras PF00071.22 ORF34063 - 2.3e-06 27.3 0.0 3.3e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Ras family Hexapep PF00132.24 ORF30103 - 1.2e-29 100.9 14.3 4.8e-08 32.4 0.3 5.2 2 1 3 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF30103 - 2.3e-11 43.3 18.1 8.7e-07 28.6 0.1 5.8 4 1 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF30103 - 0.0045 16.0 0.0 0.063 12.2 0.0 2.0 2 0 0 2 2 2 1 L-fucokinase DUF4954 PF16314.5 ORF30103 - 0.013 13.7 1.1 0.031 12.4 0.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4954) Bactofilin PF04519.13 ORF30103 - 0.016 15.5 3.0 0.031 14.6 0.0 2.4 2 1 1 3 3 3 0 Polymer-forming cytoskeletal Paramecium_SA PF01508.16 ORF2896 - 0.93 10.0 23.1 0.9 10.0 0.2 3.9 4 0 0 4 4 4 0 Paramecium surface antigen domain PDR_CDR PF06422.12 ORF2852 - 0.019 14.9 2.0 0.019 14.9 2.0 2.3 1 1 1 2 2 2 0 CDR ABC transporter RDD PF06271.12 ORF2852 - 0.042 14.1 0.8 0.071 13.3 0.8 1.4 1 0 0 1 1 1 0 RDD family NYD-SP12_N PF15015.6 ORF2852 - 0.07 11.5 0.0 0.087 11.2 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated, N-terminal Spore_YhaL PF14147.6 ORF2852 - 0.15 11.8 2.2 0.47 10.2 2.2 1.8 1 0 0 1 1 1 0 Sporulation protein YhaL Metallophos PF00149.28 ORF26714 - 0.0055 17.2 7.5 0.0084 16.6 7.5 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PPR_2 PF13041.6 ORF21517 - 2.4e-20 72.5 0.0 5.1e-07 29.8 0.0 4.4 1 1 4 5 5 5 5 PPR repeat family PPR_3 PF13812.6 ORF21517 - 1.6e-16 60.1 0.0 2.4e-06 27.5 0.0 3.8 2 1 3 5 5 5 3 Pentatricopeptide repeat domain PPR PF01535.20 ORF21517 - 2.2e-16 58.9 0.7 0.006 16.7 0.0 5.8 6 0 0 6 6 6 4 PPR repeat PPR_long PF17177.4 ORF21517 - 3.3e-10 39.7 0.8 4.5e-06 26.2 0.1 2.2 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF21517 - 5.5e-06 26.0 0.5 2.4 7.9 0.0 5.6 8 1 0 8 8 8 2 PPR repeat SNAP PF14938.6 ORF21517 - 0.0025 17.3 1.0 0.97 8.8 0.2 2.3 2 0 0 2 2 2 2 Soluble NSF attachment protein, SNAP TPR_7 PF13176.6 ORF21517 - 0.0059 16.6 0.3 27 5.1 0.0 4.1 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF21517 - 0.015 16.1 2.5 16 6.6 0.0 3.9 2 1 1 3 3 3 0 Tetratricopeptide repeat HemY_N PF07219.13 ORF21517 - 0.031 14.5 0.1 0.073 13.3 0.1 1.6 1 0 0 1 1 1 0 HemY protein N-terminus DUF3322 PF11795.8 ORF21517 - 0.032 14.2 1.4 1.4 8.9 0.1 2.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) Synaptobrevin PF00957.21 ORF1972 - 7.3e-17 60.9 1.8 1.6e-16 59.9 1.8 1.6 1 0 0 1 1 1 1 Synaptobrevin RNase_H2-Ydr279 PF09468.10 ORF1972 - 0.0013 19.0 1.1 0.0023 18.1 0.4 1.8 1 1 0 1 1 1 1 Ydr279p protein family (RNase H2 complex component) wHTH domain Cadherin_C_2 PF16492.5 ORF1972 - 0.034 14.9 1.2 0.11 13.2 1.2 1.9 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal RXLR PF16810.5 ORF1972 - 0.037 14.5 4.1 0.58 10.6 0.2 2.4 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity SNARE PF05739.19 ORF1972 - 0.047 13.7 5.6 0.21 11.6 4.9 2.3 2 0 0 2 2 2 0 SNARE domain BLOC1_2 PF10046.9 ORF1972 - 0.087 13.1 1.6 0.88 9.9 0.1 2.3 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Orf78 PF06024.12 ORF1972 - 0.58 10.5 4.8 0.24 11.7 0.3 2.6 3 1 0 3 3 3 0 Orf78 (ac78) Use1 PF09753.9 ORF1972 - 1.1 8.9 10.5 3.7 7.2 0.2 2.8 2 1 1 3 3 3 0 Membrane fusion protein Use1 DUF948 PF06103.11 ORF1972 - 1.2 9.4 0.0 1.2 9.4 0.0 2.3 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF2207 PF09972.9 ORF16530 - 4.9 5.8 4.3 6 5.5 4.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Tub PF01167.18 ORF15815 - 5.9e-36 124.4 0.0 4.8e-35 121.5 0.0 1.9 1 1 0 1 1 1 1 Tub family DUF3527 PF12043.8 ORF15815 - 0.01 15.4 0.0 0.015 14.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3527) HTH_Tnp_IS630 PF01710.16 ORF152129 - 0.022 14.8 3.8 0.022 14.8 3.8 2.7 1 1 2 3 3 3 0 Transposase FPP PF05911.11 ORF152129 - 0.036 12.3 28.0 0.048 11.9 28.0 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil DUF3450 PF11932.8 ORF152129 - 0.32 10.2 27.8 0.021 14.1 13.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) DUF3584 PF12128.8 ORF152129 - 0.51 7.8 31.4 0.46 7.9 24.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) DUF745 PF05335.13 ORF152129 - 0.61 9.8 19.1 0.16 11.6 15.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) CC2-LZ PF16516.5 ORF152129 - 0.67 10.4 27.2 0.081 13.3 5.5 3.4 1 1 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator APG6_N PF17675.1 ORF152129 - 1.3 9.5 35.1 0.19 12.2 2.9 3.1 1 1 2 3 3 3 0 Apg6 coiled-coil region Lebercilin PF15619.6 ORF152129 - 2.1 7.9 40.0 0.11 12.1 14.3 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Fez1 PF06818.15 ORF152129 - 3.1 8.2 28.4 2 8.8 2.2 2.1 1 1 1 2 2 2 0 Fez1 DHR10 PF18595.1 ORF152129 - 4 7.5 32.2 0.99 9.5 8.5 3.9 1 1 3 4 4 4 0 Designed helical repeat protein 10 domain TraF_2 PF13729.6 ORF152129 - 5 6.4 11.6 0.52 9.6 6.4 1.8 1 1 0 1 1 1 0 F plasmid transfer operon, TraF, protein Striatin PF08232.12 ORF152129 - 8.6 6.9 22.7 1.5 9.4 18.0 2.0 1 1 1 2 2 2 0 Striatin family YscO PF07321.12 ORF152129 - 9.9 6.1 26.8 0.78 9.7 1.3 2.8 1 1 2 3 3 3 0 Type III secretion protein YscO HPIP_like PF18524.1 ORF149795 - 7.4 6.4 15.6 8.8 6.2 0.1 4.8 5 0 0 5 5 5 0 High potential iron-sulfur protein like CH_2 PF06294.11 ORF147259 - 2.3e-32 111.0 0.3 2.3e-32 111.0 0.3 1.8 2 0 0 2 2 2 1 CH-like domain in sperm protein CAMSAP_CH PF11971.8 ORF147259 - 2.9e-17 62.3 0.1 2.9e-17 62.3 0.1 1.9 3 0 0 3 3 3 1 CAMSAP CH domain PKcGMP_CC PF16808.5 ORF147259 - 0.00025 20.9 5.1 0.047 13.5 0.1 2.9 2 0 0 2 2 2 2 Coiled-coil N-terminus of cGMP-dependent protein kinase CH PF00307.31 ORF147259 - 0.0012 19.0 1.0 0.0025 18.0 0.1 2.0 2 0 0 2 2 2 1 Calponin homology (CH) domain DUF641 PF04859.12 ORF147259 - 0.013 15.9 4.9 0.013 15.9 4.9 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) ABC_tran_CTD PF16326.5 ORF147259 - 0.068 13.4 3.2 12 6.3 3.4 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain Fib_alpha PF08702.10 ORF147259 - 0.33 11.1 9.8 0.22 11.7 7.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF147259 - 1.8 9.1 8.8 0.89 10.1 5.6 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 TMF_DNA_bd PF12329.8 ORF147259 - 2.3 8.3 14.5 0.64 10.1 9.1 2.7 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF1664 PF07889.12 ORF147259 - 4.1 7.5 7.2 1.4 8.9 2.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Prok-E2_D PF14460.6 ORF145788 - 0.025 14.3 0.1 0.45 10.2 0.0 2.1 2 0 0 2 2 2 0 Prokaryotic E2 family D zf-RING_2 PF13639.6 ORF14444 - 3.3e-11 43.3 9.8 5.6e-11 42.6 9.8 1.4 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF14444 - 1.7e-07 31.4 8.1 4.3e-07 30.1 8.1 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF14444 - 6.2e-06 25.9 9.1 1.5e-05 24.6 9.1 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF14444 - 0.00032 20.5 7.0 0.00053 19.8 7.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF14444 - 0.0011 19.0 3.6 0.0011 18.9 2.5 1.7 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF14444 - 0.0011 18.8 9.9 0.0019 18.0 9.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF14444 - 0.0022 17.8 10.7 0.004 17.0 10.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF14444 - 0.0064 16.4 9.2 0.011 15.7 9.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF14444 - 0.0092 16.0 7.8 0.033 14.2 7.8 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger CEBP_ZZ PF16366.5 ORF14444 - 0.072 13.3 5.2 0.16 12.2 5.2 1.6 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Peptidase_C5 PF00770.18 ORF14444 - 0.1 12.3 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Adenovirus endoprotease RINGv PF12906.7 ORF14444 - 0.12 12.6 11.2 0.27 11.4 11.2 1.7 1 0 0 1 1 1 0 RING-variant domain FANCL_C PF11793.8 ORF14444 - 0.13 12.4 8.6 0.39 10.9 8.6 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain CTU2 PF10288.9 ORF14444 - 0.5 10.6 5.2 5 7.4 5.2 2.1 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 zf-RING-like PF08746.11 ORF14444 - 0.79 10.1 10.2 1.5 9.2 10.2 1.5 1 0 0 1 1 1 0 RING-like domain CagY_M PF07337.11 ORF141797 - 0.26 10.9 1.9 0.5 10.0 0.1 2.2 2 0 0 2 2 2 0 DC-EC Repeat HlyIII PF03006.20 ORF140324 - 2.2e-37 128.9 20.5 2.6e-37 128.7 20.5 1.0 1 0 0 1 1 1 1 Haemolysin-III related CD52 PF15116.6 ORF140324 - 7.3 6.7 8.1 0.17 12.0 0.6 2.1 3 0 0 3 3 3 0 CAMPATH-1 antigen PUF PF00806.19 ORF140091 - 7.6e-12 44.2 0.4 9.4e-06 25.0 0.1 2.6 2 0 0 2 2 2 2 Pumilio-family RNA binding repeat Voltage_CLC PF00654.20 ORF139622 - 0.01 15.1 9.2 0.013 14.7 9.2 1.1 1 0 0 1 1 1 0 Voltage gated chloride channel ICL PF00463.21 ORF137035 - 2.5e-73 247.4 1.6 2.7e-73 247.2 1.6 1.0 1 0 0 1 1 1 1 Isocitrate lyase family ADSL_C PF10397.9 ORF137035 - 0.089 13.4 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminus DUF5305 PF17231.2 ORF136918 - 0.0039 16.6 0.2 0.005 16.3 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5305) Filamin PF00630.19 ORF136918 - 0.15 12.9 0.4 0.34 11.7 0.1 1.7 2 0 0 2 2 2 0 Filamin/ABP280 repeat Fez1 PF06818.15 ORF132610 - 0.52 10.7 14.8 0.72 10.3 14.8 1.2 1 0 0 1 1 1 0 Fez1 Lectin_N PF03954.14 ORF132610 - 0.88 9.3 7.0 2.3 8.0 7.0 1.8 1 1 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF4407 PF14362.6 ORF132610 - 2.5 7.4 9.8 3.3 7.0 9.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Borrelia_P83 PF05262.11 ORF132610 - 2.6 6.4 9.6 3.2 6.2 9.6 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein V-SNARE_C PF12352.8 ORF131068 - 6.8e-12 45.5 1.8 1.8e-11 44.2 1.8 1.8 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 ORF131068 - 0.00034 20.5 8.0 0.00034 20.5 0.2 2.9 1 1 2 3 3 3 1 Sec20 PDCD7 PF16021.5 ORF131068 - 0.00039 19.6 7.2 0.0005 19.3 7.2 1.2 1 0 0 1 1 1 1 Programmed cell death protein 7 Exonuc_VII_L PF02601.15 ORF131068 - 0.0034 17.0 5.1 0.004 16.8 5.1 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit TACC_C PF05010.14 ORF131068 - 0.01 15.6 11.6 0.015 15.1 11.6 1.3 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF4795 PF16043.5 ORF131068 - 0.034 13.8 11.1 0.22 11.1 0.8 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) SMAP PF15477.6 ORF131068 - 0.072 14.0 1.7 0.072 14.0 1.7 2.2 1 1 1 2 2 2 0 Small acidic protein family BORCS7 PF16088.5 ORF131068 - 0.079 13.2 4.5 0.17 12.1 4.0 1.9 1 1 0 1 1 1 0 BLOC-1-related complex sub-unit 7 ZapB PF06005.12 ORF131068 - 0.093 13.2 6.8 0.78 10.2 0.1 2.6 1 1 1 2 2 2 0 Cell division protein ZapB FapA PF03961.13 ORF131068 - 0.095 11.3 6.4 0.12 11.0 6.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF1664 PF07889.12 ORF131068 - 0.13 12.3 9.2 1.2 9.2 0.2 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 ORF131068 - 0.15 12.0 8.8 0.59 10.1 0.9 2.2 1 1 1 2 2 2 0 Laminin Domain II YscO-like PF16789.5 ORF131068 - 0.16 12.0 9.2 0.059 13.4 5.1 2.0 1 1 1 2 2 2 0 YscO-like protein Prominin PF05478.11 ORF131068 - 0.31 8.9 7.9 0.38 8.6 7.9 1.2 1 0 0 1 1 1 0 Prominin DUF3450 PF11932.8 ORF131068 - 0.34 10.2 12.2 0.14 11.4 3.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF4407 PF14362.6 ORF131068 - 0.44 9.9 7.4 0.62 9.4 7.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) P4Ha_N PF08336.11 ORF131068 - 0.46 10.5 9.7 0.74 9.8 4.5 2.6 1 1 1 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Prefoldin PF02996.17 ORF131068 - 0.48 10.4 7.1 1.9 8.4 0.1 3.0 1 1 2 3 3 3 0 Prefoldin subunit H-kinase_dim PF02895.14 ORF131068 - 0.81 10.1 5.4 29 5.1 0.0 2.7 2 1 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain Ac76 PF05814.11 ORF131068 - 0.96 9.5 5.1 0.2 11.7 0.8 2.3 2 0 0 2 2 2 0 Orf76 (Ac76) Swi5 PF07061.11 ORF131068 - 1.1 9.4 6.9 2.3e+02 2.0 6.9 2.6 1 1 0 1 1 1 0 Swi5 YabA PF06156.13 ORF131068 - 2.2 9.0 9.5 1.7e+02 2.9 9.4 2.5 1 1 0 1 1 1 0 Initiation control protein YabA BLOC1_2 PF10046.9 ORF131068 - 2.9 8.3 11.3 14 6.1 5.7 2.5 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 BORCS8 PF10167.9 ORF131068 - 3.4 7.7 10.0 0.49 10.4 1.9 2.5 2 1 1 3 3 3 0 BLOC-1-related complex sub-unit 8 SlyX PF04102.12 ORF131068 - 4 8.1 7.8 1.9 9.2 0.2 2.9 2 1 0 2 2 2 0 SlyX Fib_alpha PF08702.10 ORF131068 - 9.7 6.4 14.4 2.1 8.5 0.7 2.1 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family BING4CT PF08149.11 ORF127179 - 0.21 11.4 0.0 0.34 10.7 0.0 1.3 1 0 0 1 1 1 0 BING4CT (NUC141) domain Chitin_synth_1 PF01644.17 ORF126281 - 0.00082 19.4 0.0 0.0012 18.9 0.0 1.5 1 1 0 1 1 1 1 Chitin synthase Glycos_transf_2 PF00535.26 ORF126281 - 0.031 14.1 0.6 0.74 9.6 0.0 2.6 2 1 1 3 3 3 0 Glycosyl transferase family 2 Tsi6 PF18660.1 ORF126281 - 0.044 13.8 0.0 0.093 12.8 0.0 1.5 1 0 0 1 1 1 0 Tsi6 MORN PF02493.20 ORF126180 - 0.00098 18.9 2.8 0.00098 18.9 2.8 4.3 3 1 1 4 4 4 1 MORN repeat Snf7 PF03357.21 ORF123825 - 9.3e-19 67.7 27.8 9.3e-19 67.7 27.8 1.9 2 1 1 3 3 3 1 Snf7 DSBA PF01323.20 ORF123825 - 0.07 12.9 5.7 0.087 12.6 4.6 1.7 1 1 1 2 2 2 0 DSBA-like thioredoxin domain DUF2795 PF11387.8 ORF123825 - 0.094 12.9 0.7 0.58 10.4 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2795) DUF2258 PF10015.9 ORF123825 - 0.095 12.9 0.5 0.095 12.9 0.5 2.3 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) DUF554 PF04474.12 ORF12363 - 7.9e-57 192.2 18.5 9e-57 192.1 18.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF554) DUF212 PF02681.14 ORF122495 - 0.091 12.9 5.3 4.9 7.3 0.2 2.7 2 1 1 3 3 3 0 Divergent PAP2 family HPIP_like PF18524.1 ORF122495 - 0.21 11.4 13.4 51 3.7 0.1 5.7 5 0 0 5 5 5 0 High potential iron-sulfur protein like DUF2112 PF09885.9 ORF122495 - 0.22 11.6 12.0 15 5.6 0.1 4.4 5 0 0 5 5 5 0 Uncharacterized protein conserved in archaea (DUF2112) Cuticle_4 PF15955.5 ORF121685 - 0.02 15.6 0.3 0.04 14.6 0.3 1.6 1 0 0 1 1 1 0 Cuticle protein DUF5305 PF17231.2 ORF121291 - 0.0038 16.7 0.2 0.0049 16.3 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5305) Filamin PF00630.19 ORF121291 - 0.16 12.8 0.4 0.34 11.7 0.1 1.7 2 0 0 2 2 2 0 Filamin/ABP280 repeat AAA_18 PF13238.6 ORF121274 - 1.8e-09 38.3 0.0 4.1e-09 37.1 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF121274 - 2e-05 24.8 0.2 0.0001 22.5 0.2 2.0 1 1 0 1 1 1 1 AAA domain Guanylate_kin PF00625.21 ORF121274 - 0.0003 20.5 0.0 0.00041 20.1 0.0 1.2 1 0 0 1 1 1 1 Guanylate kinase ABC_tran PF00005.27 ORF121274 - 0.033 14.7 0.0 0.048 14.2 0.0 1.6 1 1 0 1 1 1 0 ABC transporter AAA_28 PF13521.6 ORF121274 - 0.073 13.3 0.0 2.9 8.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 ORF121274 - 0.086 12.7 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase BPD_transp_1 PF00528.22 ORF118787 - 3.3e-24 85.7 16.9 4.2e-24 85.3 16.9 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DHHC PF01529.20 ORF117506 - 1.5e-23 83.4 7.6 1.5e-23 83.4 7.6 2.5 2 1 0 2 2 2 1 DHHC palmitoyltransferase DUF639 PF04842.12 ORF117506 - 0.0076 15.7 1.4 0.014 14.8 1.4 1.4 1 0 0 1 1 1 1 Plant protein of unknown function (DUF639) MgtE PF01769.16 ORF117506 - 0.27 11.6 6.5 1.7 9.0 2.5 2.1 2 0 0 2 2 2 0 Divalent cation transporter DUF2207 PF09972.9 ORF117506 - 0.9 8.2 3.4 1.3 7.7 0.1 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) TcpE PF12648.7 ORF117506 - 1.6 9.3 9.2 1.6 9.3 2.5 2.4 2 0 0 2 2 2 0 TcpE family LytTR PF04397.15 ORF116659 - 7.3e-34 115.9 0.5 1.7e-33 114.7 0.1 1.8 2 0 0 2 2 2 1 LytTr DNA-binding domain Response_reg PF00072.24 ORF116659 - 7.1e-18 64.8 0.0 1.3e-17 64.0 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Catalase PF00199.19 ORF112642 - 7.8e-53 179.9 0.0 1.2e-52 179.3 0.0 1.3 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 ORF112642 - 6.3e-12 45.5 0.2 1e-11 44.8 0.2 1.3 1 0 0 1 1 1 1 Catalase-related immune-responsive DUF2031 PF09592.10 ORF112642 - 0.017 14.6 0.1 0.017 14.6 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2031) DUF3854 PF12965.7 ORF112642 - 0.063 13.2 0.2 0.1 12.6 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3854) Tox-REase-2 PF15646.6 ORF112619 - 0.089 13.0 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 zf-RING_2 PF13639.6 ORF111995 - 3e-08 33.9 12.4 6.4e-07 29.6 12.4 2.5 1 1 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF111995 - 1.5e-07 31.6 7.8 1.5e-07 31.6 7.8 2.0 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF111995 - 7.4e-07 29.1 2.4 3.1e-06 27.1 2.4 2.0 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF111995 - 4.8e-06 26.2 6.4 0.0009 18.9 2.0 2.5 2 0 0 2 2 2 2 RING-like zinc finger zf-C3HC4 PF00097.25 ORF111995 - 1.2e-05 25.1 3.1 4.2e-05 23.3 3.1 2.0 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF111995 - 0.00032 20.5 5.0 0.00032 20.5 5.0 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF111995 - 0.00039 20.0 4.3 0.00039 20.0 4.3 2.0 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF111995 - 0.0026 17.7 8.7 0.015 15.3 8.8 2.2 1 1 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF111995 - 0.14 12.3 8.2 0.081 13.1 3.0 2.5 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF111995 - 0.67 9.9 13.4 0.52 10.2 5.6 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF111995 - 1.5 9.0 9.5 10 6.4 8.3 2.7 1 1 0 1 1 1 0 RING-variant domain FANCL_C PF11793.8 ORF111995 - 3.3 7.9 10.9 8.1 6.7 9.0 2.7 1 1 1 2 2 2 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF111995 - 4.1 7.3 10.6 0.48 10.3 4.7 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 DUF5496 PF17600.2 ORF109485 - 0.14 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5496) zf-RING_2 PF13639.6 ORF108162 - 3.3e-11 43.3 9.8 5.6e-11 42.6 9.8 1.4 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF108162 - 1.7e-07 31.4 8.1 4.3e-07 30.1 8.1 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF108162 - 6.2e-06 25.9 9.1 1.5e-05 24.6 9.1 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF108162 - 0.00032 20.5 7.0 0.00053 19.8 7.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF108162 - 0.0011 19.0 3.6 0.0011 18.9 2.5 1.7 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF108162 - 0.0011 18.8 9.9 0.0019 18.0 9.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF108162 - 0.0022 17.8 10.7 0.004 17.0 10.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF108162 - 0.0064 16.4 9.2 0.011 15.7 9.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF108162 - 0.0092 16.0 7.8 0.033 14.2 7.8 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger CEBP_ZZ PF16366.5 ORF108162 - 0.072 13.3 5.2 0.16 12.2 5.2 1.6 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Peptidase_C5 PF00770.18 ORF108162 - 0.1 12.3 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Adenovirus endoprotease RINGv PF12906.7 ORF108162 - 0.12 12.6 11.2 0.27 11.4 11.2 1.7 1 0 0 1 1 1 0 RING-variant domain FANCL_C PF11793.8 ORF108162 - 0.13 12.4 8.6 0.39 10.9 8.6 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain CTU2 PF10288.9 ORF108162 - 0.5 10.6 5.2 5 7.4 5.2 2.1 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 zf-RING-like PF08746.11 ORF108162 - 0.79 10.1 10.2 1.5 9.2 10.2 1.5 1 0 0 1 1 1 0 RING-like domain Tmemb_9 PF05434.11 ORF10793 - 0.033 14.1 0.5 0.075 12.9 0.5 1.7 1 0 0 1 1 1 0 TMEM9 OSTbeta PF15048.6 ORF10793 - 0.34 11.0 2.2 0.27 11.4 0.4 1.8 2 0 0 2 2 2 0 Organic solute transporter subunit beta protein Connexin PF00029.19 ORF10793 - 0.47 10.2 5.6 0.053 13.3 0.5 1.9 2 0 0 2 2 2 0 Connexin MAP17 PF15807.5 ORF10793 - 0.58 10.4 5.3 0.21 11.8 1.1 2.2 2 0 0 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF4446 PF14584.6 ORF10793 - 0.88 9.5 5.9 0.097 12.7 0.4 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF4446) DUF4231 PF14015.6 ORF10793 - 8 7.0 6.8 5 7.7 4.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) DUF533 PF04391.12 ORF107848 - 3.1e-49 167.0 0.4 3.9e-49 166.6 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF533) TerB PF05099.13 ORF107848 - 0.0043 17.0 1.1 0.0074 16.2 1.0 1.6 1 1 0 1 1 1 1 Tellurite resistance protein TerB YtxH PF12732.7 ORF107848 - 5.1 7.7 6.3 21 5.7 6.4 2.1 1 1 0 1 1 1 0 YtxH-like protein DUF2207 PF09972.9 ORF107456 - 4.9 5.8 4.3 6 5.5 4.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5583 PF17821.1 ORF106490 - 0.038 14.0 0.2 1.4 8.9 0.0 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5583) SnoaL PF07366.12 ORF1032 - 2.1e-12 46.9 0.1 4.8e-12 45.8 0.0 1.6 2 0 0 2 2 2 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.7 ORF1032 - 3.8e-09 37.1 0.1 7.5e-09 36.2 0.1 1.5 1 1 0 1 1 1 1 SnoaL-like domain DUF2475 PF10629.9 ORF10306 - 5.9e-10 39.2 1.4 3.3e-07 30.4 0.2 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF2475) UQ_con PF00179.26 ORF101951 - 1.3e-20 73.5 0.1 1.8e-20 73.0 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Peptidase_M16 PF00675.20 NODE_33309_length_652_cov_30.696921_g26518_i0forward_frame_1 - 0.039 13.9 0.4 3.7 7.5 0.1 2.4 1 1 1 2 2 2 0 Insulinase (Peptidase family M16) Aminotran_3 PF00202.21 NODE_33309_length_652_cov_30.696921_g26518_i0forward_frame_1 - 0.13 10.9 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-III Tcell_CD4_C PF12104.8 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_1 - 0.031 14.2 1.7 0.031 14.2 1.7 2.0 2 0 0 2 2 2 0 T cell CD4 receptor C terminal region DUF2701 PF10857.8 NODE_33306_length_652_cov_84.583468_g26515_i0reverse_frame_1 - 0.25 11.4 4.9 0.17 11.9 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2701) Acyl_transf_3 PF01757.22 NODE_33306_length_652_cov_84.583468_g26515_i0forward_frame_1 - 3.6e-07 29.6 10.5 4.8e-07 29.1 10.5 1.1 1 0 0 1 1 1 1 Acyltransferase family RPA_interact_N PF14766.6 NODE_33306_length_652_cov_84.583468_g26515_i0forward_frame_1 - 0.15 11.7 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 Replication protein A interacting N-terminal DUF2207 PF09972.9 NODE_33306_length_652_cov_84.583468_g26515_i0forward_frame_1 - 0.35 9.6 5.6 0.71 8.6 5.6 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF423 PF04241.15 NODE_33306_length_652_cov_84.583468_g26515_i0forward_frame_1 - 6.3 7.1 6.6 0.47 10.7 0.4 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF423) Rep_Org_C PF06926.11 NODE_33280_length_652_cov_374.165316_g26491_i0reverse_frame_1 - 0.038 14.3 2.3 0.094 13.0 0.3 2.4 1 1 1 2 2 2 0 Putative replisome organiser protein C-terminus DUF4131 PF13567.6 NODE_33280_length_652_cov_374.165316_g26491_i0forward_frame_1 - 0.039 13.6 4.3 0.056 13.1 4.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) TMEM43 PF07787.12 NODE_33280_length_652_cov_374.165316_g26491_i0forward_frame_1 - 2.4 7.5 3.8 3.5 7.0 3.8 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 PHO4 PF01384.20 NODE_33269_length_653_cov_2.650485_g26483_i0reverse_frame_1 - 0.51 9.3 3.3 0.87 8.6 3.3 1.3 1 0 0 1 1 1 0 Phosphate transporter family VPR PF00522.18 NODE_33264_length_653_cov_4.584142_g26478_i0forward_frame_1 - 0.38 10.8 1.7 0.57 10.2 0.1 2.1 3 0 0 3 3 3 0 VPR/VPX protein SRP-alpha_N PF04086.13 NODE_33237_length_653_cov_573.393204_g26455_i0forward_frame_1 - 0.98 9.3 8.7 1.2 9.0 8.7 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Presenilin PF01080.17 NODE_33237_length_653_cov_573.393204_g26455_i0forward_frame_1 - 1.4 7.6 8.6 1.6 7.4 8.6 1.1 1 0 0 1 1 1 0 Presenilin SAPS PF04499.15 NODE_33237_length_653_cov_573.393204_g26455_i0forward_frame_1 - 8 5.1 5.9 10 4.8 5.9 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF4757 PF15949.5 NODE_33207_length_654_cov_96.229402_g26428_i0reverse_frame_1 - 2.8 8.4 12.9 22 5.5 12.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4757) Orthopox_F8 PF05886.11 NODE_33205_length_654_cov_109.854604_g26426_i0reverse_frame_1 - 0.14 12.3 0.1 0.28 11.4 0.1 1.5 1 0 0 1 1 1 0 Orthopoxvirus F8 protein HTH_9 PF08221.11 NODE_33179_length_655_cov_2.561290_g26404_i0reverse_frame_3 - 0.0077 16.3 0.5 0.019 15.0 0.5 1.6 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain Med8 PF10232.9 NODE_33179_length_655_cov_2.561290_g26404_i0reverse_frame_3 - 0.21 11.1 0.1 0.3 10.6 0.1 1.1 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 DUF2691 PF10903.8 NODE_33176_length_655_cov_2.633871_g26401_i0forward_frame_2 - 0.41 10.5 6.8 0.028 14.3 1.6 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2691) RNA_polI_A34 PF08208.11 NODE_33169_length_655_cov_8.177419_g26394_i0reverse_frame_2 - 1.3 9.0 24.0 1.7 8.7 24.0 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 PBP_sp32 PF07222.12 NODE_33169_length_655_cov_8.177419_g26394_i0reverse_frame_2 - 1.6 8.1 6.4 2.8 7.3 6.4 1.5 1 1 0 1 1 1 0 Proacrosin binding protein sp32 DUF4821 PF16092.5 NODE_33164_length_655_cov_62.150000_g26389_i0forward_frame_2 - 0.037 13.7 2.9 0.045 13.4 2.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4821) LRR_6 PF13516.6 NODE_33138_length_655_cov_333.559677_g26365_i0reverse_frame_3 - 0.0026 17.7 9.3 15 6.0 0.1 6.1 6 1 0 6 6 6 2 Leucine Rich repeat LRR_1 PF00560.33 NODE_33138_length_655_cov_333.559677_g26365_i0reverse_frame_3 - 0.057 14.0 1.2 4.5 8.2 0.2 3.2 2 0 0 2 2 2 0 Leucine Rich Repeat CCT_2 PF09425.10 NODE_33122_length_656_cov_2.539452_g26352_i0forward_frame_3 - 0.032 14.1 2.8 0.1 12.5 2.8 1.9 1 0 0 1 1 1 0 Divergent CCT motif Cyclin_C PF02984.19 NODE_33121_length_656_cov_2.776167_g26351_i0reverse_frame_3 - 8.3e-09 35.6 1.1 1.7e-08 34.6 1.1 1.7 1 0 0 1 1 1 1 Cyclin, C-terminal domain DUF5436 PF17504.2 NODE_33121_length_656_cov_2.776167_g26351_i0reverse_frame_3 - 1.1 9.7 4.7 9.4 6.6 0.3 3.0 2 1 1 3 3 3 0 Family of unknown function (DUF5436) Cyclin_N PF00134.23 NODE_33121_length_656_cov_2.776167_g26351_i0reverse_frame_2 - 1.3e-21 76.7 0.1 2.8e-21 75.6 0.1 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain VPS13 PF16908.5 NODE_33121_length_656_cov_2.776167_g26351_i0forward_frame_3 - 0.025 14.4 0.0 0.032 14.0 0.0 1.4 1 1 0 1 1 1 0 Vacuolar sorting-associated protein 13, N-terminal ABC-3 PF00950.17 NODE_33081_length_657_cov_3.247588_g26317_i0reverse_frame_2 - 7.1e-23 81.4 5.3 8.8e-23 81.1 5.3 1.1 1 0 0 1 1 1 1 ABC 3 transport family YndJ PF14158.6 NODE_33081_length_657_cov_3.247588_g26317_i0reverse_frame_2 - 0.0067 15.8 0.8 0.0082 15.5 0.8 1.3 1 0 0 1 1 1 1 YndJ-like protein RuvB_C PF05491.13 NODE_33081_length_657_cov_3.247588_g26317_i0forward_frame_3 - 3.2e-19 68.6 0.0 4.9e-19 68.0 0.0 1.3 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain Seadorna_VP7 PF07387.11 NODE_33078_length_657_cov_4.318328_g26314_i0forward_frame_2 - 0.012 14.7 0.3 0.018 14.1 0.3 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Xol-1_GHMP-like PF09109.10 NODE_33058_length_657_cov_170.950161_g26295_i0forward_frame_2 - 0.014 15.3 2.3 0.023 14.6 2.3 1.4 1 1 0 1 1 1 0 Switch protein XOL-1, GHMP-like CysA_C_terminal PF17850.1 NODE_33054_length_657_cov_211.030547_g26291_i0reverse_frame_2 - 0.2 12.2 0.2 0.48 11.0 0.2 1.6 1 0 0 1 1 1 0 CysA C-terminal regulatory domain Adenyl_cycl_N PF12633.7 ORF99808 - 0.0022 18.0 0.1 0.0035 17.3 0.1 1.3 1 0 0 1 1 1 1 Adenylate cyclase NT domain DUF707 PF05212.12 ORF99808 - 0.014 14.6 0.3 0.029 13.6 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF707) ANAPC4_WD40 PF12894.7 ORF98207 - 0.037 14.3 0.0 1.7 9.0 0.1 2.5 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain TOPRIM_C PF16898.5 ORF96483 - 1.2e-19 70.8 0.0 2.2e-19 70.0 0.0 1.4 1 0 0 1 1 1 1 C-terminal associated domain of TOPRIM Toprim PF01751.22 ORF96483 - 4.3e-09 36.5 0.0 6.2e-09 36.0 0.0 1.2 1 0 0 1 1 1 1 Toprim domain PKD_channel PF08016.12 ORF94790 - 6.7 5.3 15.1 9.1 4.8 15.1 1.3 1 1 0 1 1 1 0 Polycystin cation channel DUF3466 PF11949.8 ORF94519 - 0.043 12.4 0.0 0.057 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3466) Ribosomal_L31 PF01197.18 ORF92703 - 0.048 13.9 1.0 0.096 12.9 1.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L31 zf-RING_2 PF13639.6 ORF92342 - 2.2e-13 50.3 7.2 3.3e-13 49.7 7.2 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF92342 - 1.9e-09 37.7 6.5 4e-09 36.6 6.5 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF92342 - 5.5e-08 32.5 4.8 8.3e-08 32.0 4.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF92342 - 6.6e-08 32.3 8.1 1.1e-07 31.6 8.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF92342 - 5e-07 29.5 8.7 9.7e-07 28.6 8.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF92342 - 9.9e-07 28.6 7.2 1.6e-06 28.0 7.2 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF92342 - 1.8e-06 27.6 4.5 3.3e-06 26.7 4.5 1.5 1 0 0 1 1 1 1 RING-like zinc finger Prok-RING_4 PF14447.6 ORF92342 - 1e-05 25.3 5.8 1.7e-05 24.5 5.8 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF92342 - 2.7e-05 24.1 2.5 2.7e-05 24.1 2.5 1.8 2 0 0 2 2 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF92342 - 4e-05 23.1 5.9 6.3e-05 22.5 5.9 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF92342 - 0.00013 21.9 4.1 0.0003 20.8 4.1 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_4 PF14570.6 ORF92342 - 0.00039 20.1 5.1 0.00063 19.5 5.1 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF92342 - 0.024 14.8 3.9 0.07 13.3 3.9 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 ORF92342 - 0.032 14.4 8.6 0.24 11.6 8.6 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 ORF92342 - 0.041 14.0 9.7 0.078 13.1 9.7 1.4 1 0 0 1 1 1 0 RING-variant domain Baculo_RING PF05883.11 ORF92342 - 0.044 13.8 3.4 0.087 12.8 3.4 1.4 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-C3H2C3 PF17122.5 ORF92342 - 0.086 12.9 5.0 0.17 12.0 5.0 1.6 1 0 0 1 1 1 0 Zinc-finger zf-RING_10 PF16685.5 ORF92342 - 0.098 12.8 4.7 0.19 11.9 4.7 1.4 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-RING-like PF08746.11 ORF92342 - 0.32 11.3 7.9 0.68 10.3 7.9 1.6 1 1 0 1 1 1 0 RING-like domain Exonuc_VII_L PF02601.15 ORF92342 - 0.64 9.5 8.7 0.74 9.3 8.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit PHD PF00628.29 ORF92342 - 0.96 9.4 8.7 2 8.4 8.7 1.6 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 ORF92342 - 1.2 9.1 6.5 12 5.9 0.3 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 FapA PF03961.13 ORF92342 - 1.6 7.2 10.7 2.1 6.9 10.7 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4407 PF14362.6 ORF92342 - 3 7.1 7.5 3.9 6.7 7.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Sigma70_ner PF04546.13 ORF91994 - 0.015 15.2 9.0 0.016 15.1 5.8 1.9 1 1 1 2 2 2 0 Sigma-70, non-essential region DUF724 PF05266.14 ORF91994 - 0.029 14.2 9.3 0.047 13.5 9.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Atg14 PF10186.9 ORF91994 - 0.11 11.6 9.5 0.14 11.2 9.5 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4407 PF14362.6 ORF91994 - 0.2 10.9 6.0 0.35 10.2 6.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) COG5 PF10392.9 ORF91994 - 0.29 11.3 9.7 2.2 8.4 9.3 2.0 1 1 1 2 2 2 0 Golgi transport complex subunit 5 Prefoldin_2 PF01920.20 ORF91994 - 0.3 11.1 8.1 0.79 9.7 0.9 2.7 2 1 0 2 2 2 0 Prefoldin subunit ATG16 PF08614.11 ORF91994 - 0.38 10.9 16.6 0.55 10.4 16.6 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) APG6_N PF17675.1 ORF91994 - 0.75 10.3 17.9 2.2 8.8 16.9 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region COG2 PF06148.11 ORF91994 - 1.1 9.3 11.5 0.25 11.4 1.4 2.1 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Spc7 PF08317.11 ORF91994 - 1.6 7.5 16.1 2.1 7.2 16.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein FapA PF03961.13 ORF91994 - 1.8 7.1 5.6 2.3 6.7 5.6 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Snapin_Pallidin PF14712.6 ORF91994 - 2 8.9 10.2 0.55 10.7 3.7 2.6 1 1 2 3 3 3 0 Snapin/Pallidin DUF5315 PF17242.2 ORF91994 - 3.9 7.4 12.9 0.59 10.0 1.5 2.9 2 1 1 3 3 3 0 Disordered region of unknown function (DUF5315) PRKG1_interact PF15898.5 ORF91994 - 8 7.4 15.6 8.5 7.3 3.3 2.2 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DUF4434 PF14488.6 ORF88166 - 0.01 15.8 1.8 0.26 11.3 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4434) UCH_N PF16674.5 ORF88166 - 0.7 9.8 8.2 0.3 11.0 3.2 2.4 2 0 0 2 2 2 0 N-terminal of ubiquitin carboxyl-terminal hydrolase 37 POTRA PF07244.15 ORF88152 - 0.099 13.2 0.6 10 6.8 0.0 2.7 2 1 0 2 2 2 0 Surface antigen variable number repeat Keratin_B2 PF01500.17 ORF87537 - 2.4 8.1 31.8 3 7.8 6.5 2.2 1 1 1 2 2 2 0 Keratin, high sulfur B2 protein ABC_tran PF00005.27 ORF87530 - 2.4e-14 54.0 0.0 3.7e-14 53.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF87530 - 4.4e-05 23.0 0.0 5.1e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF87530 - 0.0048 17.1 0.7 0.12 12.6 0.7 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ABC_ATPase PF09818.9 ORF87530 - 0.018 13.8 0.0 0.024 13.4 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class Cyclin PF08613.11 ORF86470 - 1.2e-05 25.8 0.0 1.6e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Cyclin MraZ PF02381.18 ORF85184 - 0.083 12.9 0.0 7.4 6.6 0.0 2.3 2 0 0 2 2 2 0 MraZ protein, putative antitoxin-like RNA_pol_Rpb1_5 PF04998.17 ORF85109 - 6.6e-22 78.2 0.5 8.7e-22 77.8 0.5 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 PRR20 PF15708.5 ORF8396 - 0.34 10.8 3.3 0.51 10.2 3.3 1.2 1 0 0 1 1 1 0 Proline-rich protein family 20 CTP_transf_3 PF02348.19 ORF82854 - 0.014 15.3 0.2 0.026 14.5 0.2 1.5 1 0 0 1 1 1 0 Cytidylyltransferase ABC_tran PF00005.27 ORF80792 - 2.4e-14 54.0 0.0 3.7e-14 53.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF80792 - 4.4e-05 23.0 0.0 5.1e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF80792 - 0.0048 17.1 0.7 0.12 12.6 0.7 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ABC_ATPase PF09818.9 ORF80792 - 0.018 13.8 0.0 0.024 13.4 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class Stc1 PF12898.7 ORF78878 - 2e-05 25.0 0.2 0.5 10.9 0.0 3.4 2 2 1 3 3 3 2 Stc1 domain zf_PR_Knuckle PF18445.1 ORF78878 - 0.0008 19.2 6.7 1.5 8.7 0.1 4.5 4 0 0 4 4 4 2 PR zinc knuckle motif DUF2083 PF09856.9 ORF78878 - 0.17 11.7 8.1 1.7 8.5 0.0 3.7 4 0 0 4 4 4 0 Predicted transcriptional regulator (DUF2083) Bowman-Birk_leg PF00228.20 ORF78878 - 1.5 9.3 29.9 1.3 9.5 0.2 5.4 5 0 0 5 5 5 0 Bowman-Birk serine protease inhibitor family EF-hand_7 PF13499.6 ORF78059 - 4.2e-30 104.0 2.7 2.8e-15 56.5 1.4 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF78059 - 7.7e-26 87.7 6.3 4.4e-06 25.8 0.3 4.3 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF78059 - 2.5e-22 76.8 3.5 2.5e-05 23.8 0.1 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF78059 - 5.2e-22 77.4 4.4 1.8e-09 37.3 0.1 3.9 1 1 3 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF78059 - 5e-14 51.1 4.5 0.0038 16.6 0.1 4.7 4 0 0 4 4 4 3 EF hand SPARC_Ca_bdg PF10591.9 ORF78059 - 0.00012 22.4 2.8 0.11 12.8 0.3 2.3 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF78059 - 0.00014 22.1 0.1 0.36 11.2 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF78059 - 0.00048 20.0 2.6 0.077 13.0 0.2 2.6 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand DUF3349 PF11829.8 ORF78059 - 0.0019 19.0 0.6 0.52 11.1 0.3 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3349) DUF5580 PF17743.1 ORF78059 - 0.022 13.3 0.4 0.92 8.0 0.0 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5580) PMBR PF09373.10 ORF78059 - 0.034 14.3 0.1 35 4.8 0.0 3.4 3 0 0 3 3 3 0 Pseudomurein-binding repeat Caleosin PF05042.13 ORF78059 - 0.098 12.6 1.3 9.5 6.1 0.0 3.0 1 1 0 2 2 2 0 Caleosin related protein SurA_N_2 PF13623.6 ORF78059 - 0.11 12.4 1.6 1.7 8.5 0.1 2.5 1 1 0 2 2 2 0 SurA N-terminal domain EF-hand_11 PF08976.11 ORF78059 - 0.12 13.3 0.2 7.7 7.5 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain RST PF12174.8 ORF78059 - 0.14 12.1 1.1 7.7 6.5 0.1 3.5 3 2 2 5 5 5 0 RCD1-SRO-TAF4 (RST) plant domain UPF0223 PF05256.12 ORF78059 - 0.14 12.5 1.5 2.8 8.4 0.1 3.0 1 1 1 3 3 3 0 Uncharacterised protein family (UPF0223) DUF2666 PF10869.8 ORF78059 - 0.14 12.3 7.7 1 9.5 0.2 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF2666) EF-hand_10 PF14788.6 ORF78059 - 0.27 11.1 4.4 12 5.9 0.1 3.6 3 1 0 3 3 3 0 EF hand Ribosomal_L27e PF01777.18 ORF78059 - 0.31 11.4 0.1 0.31 11.4 0.1 2.2 3 1 0 3 3 3 0 Ribosomal L27e protein family zf-RING_2 PF13639.6 ORF77980 - 2.2e-13 50.3 7.2 3.3e-13 49.7 7.2 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF77980 - 1.9e-09 37.7 6.5 4e-09 36.6 6.5 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF77980 - 5.5e-08 32.5 4.8 8.3e-08 32.0 4.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF77980 - 6.5e-08 32.3 8.1 1.1e-07 31.6 8.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF77980 - 5e-07 29.5 8.7 9.7e-07 28.6 8.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF77980 - 9.9e-07 28.6 7.2 1.6e-06 28.0 7.2 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF77980 - 1.5e-06 27.8 4.5 3.3e-06 26.7 4.5 1.6 1 0 0 1 1 1 1 RING-like zinc finger Prok-RING_4 PF14447.6 ORF77980 - 1e-05 25.2 5.9 1.9e-05 24.4 5.9 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF77980 - 2.7e-05 24.1 2.5 2.7e-05 24.1 2.5 1.8 2 0 0 2 2 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF77980 - 4e-05 23.1 5.9 6.3e-05 22.5 5.9 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF77980 - 0.00013 21.9 4.1 0.0003 20.8 4.1 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_4 PF14570.6 ORF77980 - 0.00038 20.2 5.1 0.00063 19.5 5.1 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain DUF4746 PF15928.5 ORF77980 - 0.0038 16.7 0.8 0.0038 16.7 0.8 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4746) Baculo_RING PF05883.11 ORF77980 - 0.0091 16.0 1.5 0.016 15.2 1.5 1.4 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4_4 PF15227.6 ORF77980 - 0.024 14.8 3.9 0.07 13.3 3.9 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 ORF77980 - 0.031 14.4 8.6 0.24 11.6 8.6 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_10 PF16685.5 ORF77980 - 0.036 14.2 3.8 0.074 13.2 3.8 1.4 1 0 0 1 1 1 0 zinc RING finger of MSL2 RINGv PF12906.7 ORF77980 - 0.041 14.0 9.7 0.078 13.1 9.7 1.4 1 0 0 1 1 1 0 RING-variant domain SPAN-X PF07458.12 ORF77980 - 0.043 14.2 7.5 3.6 8.1 0.0 3.3 3 0 0 3 3 3 0 Sperm protein associated with nucleus, mapped to X chromosome zf-C3H2C3 PF17122.5 ORF77980 - 0.088 12.9 5.0 0.17 12.0 5.0 1.5 1 0 0 1 1 1 0 Zinc-finger zf-RING-like PF08746.11 ORF77980 - 0.33 11.3 7.9 0.68 10.3 7.9 1.6 1 1 0 1 1 1 0 RING-like domain Exonuc_VII_L PF02601.15 ORF77980 - 0.47 10.0 8.6 0.53 9.8 8.6 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit PHD PF00628.29 ORF77980 - 0.98 9.4 8.7 2 8.4 8.7 1.5 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 ORF77980 - 1.3 9.0 6.5 12 5.9 0.3 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 FapA PF03961.13 ORF77980 - 1.6 7.3 10.7 2.1 6.9 10.7 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A rve PF00665.26 ORF74217 - 2.8e-25 88.8 0.0 3.8e-25 88.4 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF74217 - 6.2e-18 64.3 0.0 1.3e-17 63.3 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.6 ORF74217 - 1.9e-05 24.7 0.5 0.005 16.9 0.1 2.4 2 0 0 2 2 2 2 HTH-like domain DUF2358 PF10184.9 ORF7116 - 1.7e-07 31.5 0.0 2.5e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2358) DUF1035 PF06281.12 ORF71111 - 0.17 11.9 0.9 0.3 11.1 0.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1035) DUF4231 PF14015.6 ORF71111 - 0.34 11.4 4.4 1.2 9.6 4.4 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) ABC2_membrane_3 PF12698.7 ORF71111 - 1.8 7.6 18.8 3.3 6.7 18.8 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein START PF01852.19 ORF65847 - 5.2e-24 84.8 0.0 6.6e-24 84.5 0.0 1.0 1 0 0 1 1 1 1 START domain COX6B PF02297.17 ORF6478 - 0.032 14.5 0.0 0.077 13.2 0.0 1.7 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIb CSN4_RPN5_eIF3a PF18420.1 ORF6478 - 0.21 11.8 1.0 0.52 10.5 0.1 2.0 2 0 0 2 2 2 0 CSN4/RPN5/eIF3a helix turn helix domain CcmE PF03100.15 ORF64261 - 2.2e-12 47.0 0.0 3.1e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 CcmE Glutaredoxin PF00462.24 ORF63286 - 2.7e-17 62.7 0.0 5.4e-14 52.2 0.0 2.3 2 0 0 2 2 2 2 Glutaredoxin GST_N_3 PF13417.6 ORF63286 - 0.036 14.5 0.0 0.13 12.7 0.0 1.9 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain CPBP PF02517.16 ORF59901 - 0.15 12.5 0.9 0.16 12.3 0.2 1.4 2 0 0 2 2 2 0 CPBP intramembrane metalloprotease DUF5500 PF17604.2 ORF58180 - 0.052 13.6 0.1 0.093 12.8 0.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5500) Alg6_Alg8 PF03155.15 ORF55773 - 0.0055 15.7 2.8 0.0073 15.3 2.8 1.1 1 0 0 1 1 1 1 ALG6, ALG8 glycosyltransferase family DUF2776 PF10951.8 ORF55773 - 0.02 14.1 0.1 0.026 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) DUF3290 PF11694.8 ORF55773 - 0.025 14.5 0.6 0.039 13.9 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) E1-E2_ATPase PF00122.20 ORF55773 - 0.056 13.0 0.1 0.078 12.5 0.1 1.2 1 0 0 1 1 1 0 E1-E2 ATPase EbsA PF17255.2 ORF55773 - 0.07 13.5 0.1 0.095 13.0 0.1 1.2 1 0 0 1 1 1 0 EbsA-like protein Popeye PF04831.13 ORF55773 - 0.19 11.9 1.7 0.37 10.9 1.7 1.4 1 0 0 1 1 1 0 Popeye protein conserved region Ninjurin PF04923.12 ORF55773 - 0.19 11.7 2.1 0.45 10.5 2.1 1.6 1 1 0 1 1 1 0 Ninjurin Peptidase_S21 PF00716.17 ORF55773 - 0.2 11.3 0.0 0.28 10.8 0.0 1.2 1 0 0 1 1 1 0 Assemblin (Peptidase family S21) DUF4131 PF13567.6 ORF55773 - 0.7 9.5 2.3 1.1 8.9 2.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Chordopox_A13L PF05961.11 ORF53847 - 0.029 14.6 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF53847 - 0.033 13.9 0.0 0.086 12.5 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF53847 - 0.093 13.3 0.0 0.2 12.2 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF53847 - 0.11 12.9 1.7 0.44 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF53847 - 0.16 12.1 6.5 0.24 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator EF-hand_6 PF13405.6 ORF53409 - 1.2e-06 28.0 1.7 0.066 13.2 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF53409 - 3.9e-06 27.2 0.4 3.9e-06 27.2 0.4 2.5 3 1 0 3 3 3 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF53409 - 8.8e-06 24.9 9.2 9e-05 21.8 1.1 3.1 3 0 0 3 3 3 2 EF hand DUF4611 PF15387.6 ORF53409 - 0.84 9.9 7.9 2.3 8.5 7.9 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) CSRNP_N PF16019.5 ORF53409 - 6.9 6.5 7.1 2.1 8.2 2.6 2.0 2 1 1 3 3 3 0 Cysteine/serine-rich nuclear protein N-terminus DUF2956 PF11169.8 ORF4771 - 0.086 13.0 0.6 0.17 12.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2956) START PF01852.19 ORF44997 - 5.2e-24 84.8 0.0 6.6e-24 84.5 0.0 1.0 1 0 0 1 1 1 1 START domain Chordopox_A13L PF05961.11 ORF44571 - 0.029 14.6 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF44571 - 0.033 13.9 0.0 0.086 12.5 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF44571 - 0.093 13.3 0.0 0.2 12.2 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF44571 - 0.11 12.9 1.7 0.44 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF44571 - 0.16 12.1 6.5 0.24 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator CTP_transf_3 PF02348.19 ORF42118 - 0.014 15.3 0.2 0.026 14.5 0.2 1.5 1 0 0 1 1 1 0 Cytidylyltransferase UL45 PF05473.12 ORF41472 - 0.009 15.7 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 UL45 protein, carbohydrate-binding C-type lectin-like DeoRC PF00455.22 ORF40647 - 8.8e-56 188.3 0.5 1.1e-55 187.9 0.5 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain DUF5615 PF18480.1 ORF40647 - 0.11 12.3 0.0 1.6 8.5 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5615) Xan_ur_permease PF00860.20 ORF40212 - 3e-35 121.7 14.6 3e-35 121.7 14.6 1.4 1 1 0 1 1 1 1 Permease family YrhC PF14143.6 ORF39928 - 0.0057 16.7 0.4 0.055 13.6 0.0 2.2 2 0 0 2 2 2 1 YrhC-like protein DUF2615 PF11027.8 ORF39928 - 0.033 14.3 1.5 0.036 14.2 0.0 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2615) 7tm_1 PF00001.21 ORF39928 - 0.12 11.7 1.0 0.74 9.1 0.1 1.9 1 1 0 2 2 2 0 7 transmembrane receptor (rhodopsin family) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks103.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks103.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks103.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks103.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 17:58:15 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ER_lumen_recept PF00810.18 ORF39639 - 5e-42 144.2 13.6 7.3e-42 143.7 13.6 1.2 1 0 0 1 1 1 1 ER lumen protein retaining receptor PQ-loop PF04193.14 ORF39639 - 0.49 10.2 10.3 0.15 11.9 2.4 3.1 2 1 1 3 3 3 0 PQ loop repeat Methyltransf_23 PF13489.6 ORF38818 - 4.5e-05 23.4 0.0 6.3e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF38818 - 0.00049 20.7 0.0 0.00083 20.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF38818 - 0.02 15.6 0.0 0.043 14.5 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 ORF38818 - 0.044 14.5 0.0 0.091 13.5 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain SCAB_CC PF16712.5 ORF38584 - 0.0046 16.8 3.3 0.0064 16.3 3.3 1.2 1 0 0 1 1 1 1 Coiled-coil regions of plant-specific actin-binding protein zf-C3HC4 PF00097.25 ORF38584 - 0.015 15.2 6.1 0.04 13.8 6.1 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF38584 - 0.028 14.4 6.4 0.12 12.4 6.4 2.1 1 1 0 1 1 1 0 zinc-RING finger domain PilO PF04350.13 ORF38584 - 0.04 14.1 1.9 0.057 13.6 1.9 1.2 1 0 0 1 1 1 0 Pilus assembly protein, PilO Nsp1_C PF05064.13 ORF38584 - 0.063 13.1 0.8 0.13 12.1 0.8 1.6 1 1 0 1 1 1 0 Nsp1-like C-terminal region zf-RING_4 PF14570.6 ORF38584 - 0.35 10.7 8.7 7.3 6.5 7.5 2.8 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RING_2 PF13639.6 ORF38584 - 1.4 9.3 13.2 0.062 13.6 7.0 2.0 2 0 0 2 2 2 0 Ring finger domain ADK PF00406.22 ORF38212 - 4.5e-42 143.7 0.1 6e-42 143.3 0.1 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF38212 - 2.2e-35 122.0 0.3 3.3e-35 121.5 0.3 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF38212 - 2.6e-09 37.7 0.1 4e-09 37.1 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF38212 - 2e-08 34.5 0.0 3e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF38212 - 0.0003 20.5 0.6 0.11 12.1 0.1 2.1 2 0 0 2 2 2 2 Thymidylate kinase AAA_19 PF13245.6 ORF38212 - 0.026 14.9 0.1 0.053 13.8 0.1 1.6 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF38212 - 0.11 11.7 0.0 0.15 11.3 0.0 1.4 1 1 0 1 1 1 0 Zeta toxin AAA PF00004.29 ORF38212 - 0.18 12.3 0.7 0.75 10.2 0.7 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Methyltransf_11 PF08241.12 ORF36876 - 9.5e-14 51.8 0.0 1.4e-13 51.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF36876 - 2.7e-11 44.0 0.0 3.9e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF36876 - 1.9e-09 37.5 0.0 2.3e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF36876 - 0.0006 19.2 0.0 0.00082 18.8 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF36876 - 0.00085 20.0 0.0 0.0012 19.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 ORF36876 - 0.015 15.3 0.0 0.021 14.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF36876 - 0.021 14.7 0.0 0.031 14.1 0.0 1.3 1 1 0 1 1 1 0 Methyltransferase domain CENP-F_leu_zip PF10473.9 ORF36539 - 0.012 15.6 0.6 0.021 14.9 0.6 1.4 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1043 PF06295.12 ORF36539 - 0.29 11.1 8.0 4.2 7.4 7.9 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) Pro_isomerase PF00160.21 ORF36313 - 2.6e-15 57.0 0.0 4.3e-15 56.3 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rotamase PF00639.21 ORF36313 - 7.7e-15 55.6 0.0 1.4e-14 54.8 0.0 1.5 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF36313 - 2.3e-14 53.9 0.0 3.8e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 PPIC-type PPIASE domain MORN PF02493.20 ORF35067 - 6.6e-40 132.7 34.9 5.5e-08 32.3 0.9 6.2 6 0 0 6 6 6 6 MORN repeat Transglut_i_TM PF14400.6 ORF35067 - 0.057 13.5 0.5 0.057 13.5 0.5 1.9 2 0 0 2 2 2 0 Inactive transglutaminase fused to 7 transmembrane helices CDC27 PF09507.10 ORF33947 - 4.6 6.5 42.6 5.9 6.2 42.6 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Chordopox_A13L PF05961.11 ORF30598 - 0.029 14.6 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF30598 - 0.033 13.9 0.0 0.086 12.5 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF30598 - 0.093 13.3 0.0 0.2 12.2 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF30598 - 0.11 12.9 1.7 0.44 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF30598 - 0.16 12.1 6.5 0.24 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator Chordopox_A13L PF05961.11 ORF30354 - 0.029 14.6 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF30354 - 0.033 13.9 0.0 0.086 12.5 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF30354 - 0.093 13.3 0.0 0.2 12.2 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF30354 - 0.11 12.9 1.7 0.44 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF30354 - 0.16 12.1 6.5 0.24 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator GnHR_trans PF12369.8 ORF28725 - 0.031 15.1 0.2 0.1 13.4 0.2 1.8 1 0 0 1 1 1 0 Gonadotropin hormone receptor transmembrane region Svf1 PF08622.10 ORF28725 - 0.04 14.0 0.1 0.052 13.6 0.1 1.3 1 0 0 1 1 1 0 Svf1-like N-terminal lipocalin domain DUF3967 PF13152.6 ORF2767 - 0.075 12.8 0.5 0.18 11.6 0.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3967) DUF572 PF04502.13 ORF2767 - 3.6 7.1 7.1 4.3 6.9 7.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) DUF1906 PF08924.11 ORF27136 - 0.18 11.9 0.2 0.31 11.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1906) TPR_12 PF13424.6 ORF24974 - 1.4e-12 47.8 2.1 2.7e-09 37.2 0.2 3.1 2 1 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF24974 - 1.3e-09 37.5 10.6 0.0003 20.8 0.2 4.2 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF24974 - 4.1e-09 35.8 0.3 0.012 15.6 0.0 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF24974 - 3.2e-08 33.0 9.1 9.6e-05 22.0 0.2 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF24974 - 3.4e-08 33.0 3.7 0.0029 17.6 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF24974 - 2.1e-07 31.1 0.4 0.11 13.2 0.0 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF24974 - 2.4e-06 27.9 0.0 0.69 10.9 0.0 3.4 2 2 1 3 3 3 2 Tetratricopeptide repeat SNAP PF14938.6 ORF24974 - 0.00041 19.9 8.7 0.007 15.8 3.2 2.3 2 1 0 2 2 2 2 Soluble NSF attachment protein, SNAP TPR_10 PF13374.6 ORF24974 - 0.0034 17.2 0.7 4.9 7.1 0.1 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat Prefoldin_2 PF01920.20 ORF24974 - 0.0052 16.7 0.6 0.054 13.5 0.2 2.5 2 0 0 2 2 2 1 Prefoldin subunit CpxA_peri PF16527.5 ORF24974 - 0.012 16.0 0.6 1.4 9.3 0.2 2.2 1 1 1 2 2 2 0 Two-component sensor protein CpxA, periplasmic domain TPR_17 PF13431.6 ORF24974 - 0.013 15.8 0.3 1.6 9.3 0.1 3.0 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF24974 - 0.016 15.4 0.1 7.9 6.7 0.0 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat SPO22 PF08631.10 ORF24974 - 0.023 14.2 4.3 0.047 13.2 0.6 2.0 1 1 1 2 2 2 0 Meiosis protein SPO22/ZIP4 like Syntaxin-6_N PF09177.11 ORF24974 - 0.047 14.2 0.1 16 6.1 0.0 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF3336 PF11815.8 ORF24974 - 0.2 11.4 3.1 0.33 10.7 3.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3336) TPR_19 PF14559.6 ORF24974 - 0.21 12.2 2.0 7 7.2 0.6 3.1 2 2 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 ORF24974 - 0.21 11.7 3.6 1.3 9.2 2.5 2.4 1 1 1 2 2 2 0 MIT (microtubule interacting and transport) domain RPN7 PF10602.9 ORF24974 - 0.23 11.1 6.6 1.3 8.7 6.6 2.7 1 1 0 1 1 1 0 26S proteasome subunit RPN7 EF-hand_7 PF13499.6 ORF22707 - 1.1e-08 35.4 9.2 2.5e-08 34.2 1.0 2.9 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF22707 - 1.7e-08 33.4 4.2 3.6e-06 26.1 0.6 3.8 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF22707 - 1e-05 25.0 3.9 0.002 17.9 0.1 3.8 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF22707 - 0.00021 21.1 5.5 0.00022 21.0 0.3 3.2 4 0 0 4 4 4 1 EF-hand domain pair GlnD_UR_UTase PF08335.11 ORF22707 - 0.006 16.7 0.6 3.2 7.8 0.3 2.2 1 1 1 2 2 2 2 GlnD PII-uridylyltransferase EF-hand_5 PF13202.6 ORF22707 - 0.0061 16.0 2.5 0.0075 15.7 0.3 2.4 2 0 0 2 2 2 1 EF hand SPARC_Ca_bdg PF10591.9 ORF22707 - 0.022 15.1 6.1 0.073 13.4 6.1 1.8 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region PAS_11 PF14598.6 ORF22707 - 0.027 14.6 0.1 0.072 13.2 0.0 1.8 2 0 0 2 2 2 0 PAS domain TPR_12 PF13424.6 ORF22197 - 1.4e-12 47.8 2.1 2.7e-09 37.2 0.2 3.1 2 1 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF22197 - 1.3e-09 37.5 10.6 0.0003 20.8 0.2 4.2 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF22197 - 4.1e-09 35.8 0.3 0.012 15.6 0.0 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF22197 - 3.2e-08 33.0 9.1 9.6e-05 22.0 0.2 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF22197 - 3.4e-08 33.0 3.7 0.0029 17.6 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF22197 - 2.1e-07 31.1 0.4 0.11 13.2 0.0 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF22197 - 2.4e-06 27.9 0.0 0.69 10.9 0.0 3.4 2 2 1 3 3 3 2 Tetratricopeptide repeat SNAP PF14938.6 ORF22197 - 0.00041 19.9 8.7 0.007 15.8 3.2 2.3 2 1 0 2 2 2 2 Soluble NSF attachment protein, SNAP TPR_10 PF13374.6 ORF22197 - 0.0034 17.2 0.7 4.9 7.1 0.1 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat Prefoldin_2 PF01920.20 ORF22197 - 0.0052 16.7 0.6 0.054 13.5 0.2 2.5 2 0 0 2 2 2 1 Prefoldin subunit CpxA_peri PF16527.5 ORF22197 - 0.012 16.0 0.6 1.4 9.3 0.2 2.2 1 1 1 2 2 2 0 Two-component sensor protein CpxA, periplasmic domain TPR_17 PF13431.6 ORF22197 - 0.013 15.8 0.3 1.6 9.3 0.1 3.0 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF22197 - 0.016 15.4 0.1 7.9 6.7 0.0 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat SPO22 PF08631.10 ORF22197 - 0.023 14.2 4.3 0.047 13.2 0.6 2.0 1 1 1 2 2 2 0 Meiosis protein SPO22/ZIP4 like Syntaxin-6_N PF09177.11 ORF22197 - 0.047 14.2 0.1 16 6.1 0.0 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF3336 PF11815.8 ORF22197 - 0.2 11.4 3.1 0.33 10.7 3.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3336) TPR_19 PF14559.6 ORF22197 - 0.21 12.2 2.0 7 7.2 0.6 3.1 2 2 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 ORF22197 - 0.21 11.7 3.6 1.3 9.2 2.5 2.4 1 1 1 2 2 2 0 MIT (microtubule interacting and transport) domain RPN7 PF10602.9 ORF22197 - 0.23 11.1 6.6 1.3 8.7 6.6 2.7 1 1 0 1 1 1 0 26S proteasome subunit RPN7 Pil1 PF13805.6 ORF20576 - 0.044 13.3 0.2 0.094 12.2 0.2 1.5 1 1 1 2 2 2 0 Eisosome component PIL1 ZapB PF06005.12 ORF20576 - 0.044 14.2 0.1 0.067 13.6 0.1 1.2 1 0 0 1 1 1 0 Cell division protein ZapB Snapin_Pallidin PF14712.6 ORF20576 - 0.069 13.6 0.9 0.13 12.7 0.3 1.7 2 0 0 2 2 2 0 Snapin/Pallidin DUF241 PF03087.14 ORF20576 - 0.12 12.2 0.5 0.25 11.1 0.5 1.6 1 1 0 1 1 1 0 Arabidopsis protein of unknown function Methyltransf_23 PF13489.6 ORF18596 - 4.5e-05 23.4 0.0 6.3e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF18596 - 0.00049 20.7 0.0 0.00083 20.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF18596 - 0.02 15.6 0.0 0.043 14.5 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 ORF18596 - 0.044 14.5 0.0 0.091 13.5 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain His_Phos_1 PF00300.22 ORF16721 - 2.4e-05 24.1 0.0 0.00013 21.7 0.0 1.9 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) PH PF00169.29 ORF15006 - 0.0055 17.2 0.0 0.01 16.3 0.0 1.4 1 0 0 1 1 1 1 PH domain Mcp5_PH PF12814.7 ORF15006 - 0.13 12.4 0.0 0.72 10.0 0.0 2.2 1 1 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology Ank_2 PF12796.7 ORF148729 - 5.2e-11 43.0 0.0 4.3e-06 27.2 0.0 3.0 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF148729 - 3.1e-09 37.2 0.1 0.019 15.6 0.0 3.9 3 2 1 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF148729 - 1.3e-08 34.9 0.1 0.69 10.3 0.0 4.4 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF148729 - 1.5e-08 34.2 3.1 0.069 13.7 0.0 5.8 6 1 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF148729 - 0.0011 19.3 0.2 20 5.9 0.0 4.6 5 0 0 5 5 5 1 Ankyrin repeat PTH2 PF01981.16 ORF14571 - 1.4e-40 138.2 0.1 2.3e-40 137.5 0.1 1.3 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 UBA PF00627.31 ORF14571 - 0.00044 20.1 4.6 0.00069 19.5 0.1 2.3 2 0 0 2 2 2 1 UBA/TS-N domain UBA_4 PF14555.6 ORF14571 - 0.0036 17.1 0.0 0.008 16.0 0.0 1.6 1 0 0 1 1 1 1 UBA-like domain BTB_3 PF16017.5 ORF14571 - 0.0079 16.3 0.0 0.014 15.5 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain Sld5 PF05916.11 ORF145121 - 2.2e-10 41.0 0.3 3.4e-10 40.3 0.3 1.3 1 0 0 1 1 1 1 GINS complex protein Chordopox_A13L PF05961.11 ORF14504 - 0.029 14.6 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF14504 - 0.033 13.9 0.0 0.086 12.5 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF14504 - 0.093 13.3 0.0 0.2 12.2 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF14504 - 0.11 12.9 1.7 0.44 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF14504 - 0.16 12.1 6.5 0.24 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator CPBP PF02517.16 ORF144515 - 0.15 12.5 0.9 0.16 12.3 0.2 1.4 2 0 0 2 2 2 0 CPBP intramembrane metalloprotease SnoaL PF07366.12 ORF140805 - 0.14 11.9 0.0 6 6.7 0.0 2.2 1 1 0 1 1 1 0 SnoaL-like polyketide cyclase HTH_Tnp_Tc3_2 PF01498.18 ORF140141 - 0.055 13.7 0.0 0.096 12.9 0.0 1.4 1 0 0 1 1 1 0 Transposase DDRGK PF09756.9 ORF140141 - 0.095 12.3 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 DDRGK domain TssN PF17555.2 ORF133476 - 0.2 11.0 11.8 0.19 11.1 5.6 2.1 1 1 1 2 2 2 0 Type VI secretion system, TssN Dicty_CAR PF05462.11 ORF133476 - 0.48 9.5 10.0 2.3 7.2 10.1 1.9 1 1 0 1 1 1 0 Slime mold cyclic AMP receptor Resistin PF06954.11 ORF12754 - 0.094 13.3 1.0 0.24 12.0 1.0 1.7 1 0 0 1 1 1 0 Resistin DUF429 PF04250.13 ORF12686 - 0.099 12.4 1.1 0.67 9.7 1.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF429) Chordopox_A13L PF05961.11 ORF125653 - 0.029 14.6 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF125653 - 0.033 13.9 0.0 0.086 12.5 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF125653 - 0.093 13.3 0.0 0.2 12.2 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF125653 - 0.11 12.9 1.7 0.44 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF125653 - 0.16 12.1 6.5 0.24 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator peroxidase PF00141.23 ORF121153 - 1.1e-30 107.1 0.0 1.3e-30 106.8 0.0 1.0 1 0 0 1 1 1 1 Peroxidase EF-hand_7 PF13499.6 ORF117836 - 4.2e-30 104.0 2.7 2.8e-15 56.5 1.4 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF117836 - 7.7e-26 87.7 6.3 4.4e-06 25.8 0.3 4.3 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF117836 - 2.5e-22 76.8 3.5 2.5e-05 23.8 0.1 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF117836 - 5.2e-22 77.4 4.4 1.8e-09 37.3 0.1 3.9 1 1 3 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF117836 - 5e-14 51.1 4.5 0.0038 16.6 0.1 4.7 4 0 0 4 4 4 3 EF hand SPARC_Ca_bdg PF10591.9 ORF117836 - 0.00012 22.4 2.8 0.11 12.8 0.3 2.3 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF117836 - 0.00014 22.1 0.1 0.36 11.2 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF117836 - 0.00048 20.0 2.6 0.077 13.0 0.2 2.6 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand DUF3349 PF11829.8 ORF117836 - 0.0019 19.0 0.6 0.52 11.1 0.3 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3349) DUF5580 PF17743.1 ORF117836 - 0.022 13.3 0.4 0.92 8.0 0.0 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5580) PMBR PF09373.10 ORF117836 - 0.034 14.3 0.1 35 4.8 0.0 3.4 3 0 0 3 3 3 0 Pseudomurein-binding repeat Caleosin PF05042.13 ORF117836 - 0.098 12.6 1.3 9.5 6.1 0.0 3.0 1 1 0 2 2 2 0 Caleosin related protein SurA_N_2 PF13623.6 ORF117836 - 0.11 12.4 1.6 1.7 8.5 0.1 2.5 1 1 0 2 2 2 0 SurA N-terminal domain EF-hand_11 PF08976.11 ORF117836 - 0.12 13.3 0.2 7.7 7.5 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain RST PF12174.8 ORF117836 - 0.14 12.1 1.1 7.7 6.5 0.1 3.5 3 2 2 5 5 5 0 RCD1-SRO-TAF4 (RST) plant domain UPF0223 PF05256.12 ORF117836 - 0.14 12.5 1.5 2.8 8.4 0.1 3.0 1 1 1 3 3 3 0 Uncharacterised protein family (UPF0223) DUF2666 PF10869.8 ORF117836 - 0.14 12.3 7.7 1 9.5 0.2 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF2666) EF-hand_10 PF14788.6 ORF117836 - 0.27 11.1 4.4 12 5.9 0.1 3.6 3 1 0 3 3 3 0 EF hand Ribosomal_L27e PF01777.18 ORF117836 - 0.31 11.4 0.1 0.31 11.4 0.1 2.2 3 1 0 3 3 3 0 Ribosomal L27e protein family Fer4_7 PF12838.7 ORF115975 - 7.8e-13 48.8 23.6 1.2e-05 25.8 7.5 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF115975 - 1.7e-12 47.3 18.0 1.4e-06 28.4 1.9 2.9 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF115975 - 1.7e-12 48.1 17.5 0.00018 22.4 0.8 4.4 4 1 0 4 4 4 4 4Fe-4S double cluster binding domain Fer4 PF00037.27 ORF115975 - 8.7e-12 44.3 36.5 4.1e-09 35.9 1.6 5.3 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_6 PF12837.7 ORF115975 - 1.9e-09 37.2 35.6 2.3e-06 27.5 1.5 4.6 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_10 PF13237.6 ORF115975 - 5e-09 36.1 24.4 0.00058 19.9 8.5 4.1 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF115975 - 2.5e-08 34.3 43.8 0.0091 16.9 6.4 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_21 PF14697.6 ORF115975 - 6.6e-08 32.6 27.1 0.0001 22.3 12.7 3.9 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_11 PF13247.6 ORF115975 - 2.4e-07 30.8 15.1 5.1e-07 29.7 4.7 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF115975 - 1.9e-06 27.6 34.1 0.00042 20.3 1.2 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_4 PF12800.7 ORF115975 - 1.6e-05 25.1 26.9 0.025 15.1 1.9 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 ORF115975 - 4.7e-05 23.7 20.7 0.01 16.3 3.8 2.9 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF115975 - 0.0008 19.9 23.8 0.052 14.1 0.9 4.3 2 1 3 5 5 5 4 4Fe-4S dicluster domain Fer4_15 PF13459.6 ORF115975 - 0.032 14.9 16.5 0.32 11.8 0.1 4.1 3 1 0 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 ORF115975 - 0.48 11.0 21.8 0.91 10.1 0.9 3.6 3 1 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 ORF115975 - 5.7 7.1 8.8 1.2 9.3 4.0 2.2 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Pyr_redox_dim PF02852.22 ORF115893 - 1.1e-26 93.2 0.0 1.5e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_2 PF07992.14 ORF115893 - 2.1e-07 30.5 0.0 2.9e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DUF4152 PF13680.6 ORF115893 - 0.013 14.9 0.0 0.025 14.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4152) Ras PF00071.22 ORF114165 - 1.4e-50 171.0 0.0 1.9e-50 170.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF114165 - 5.3e-31 107.3 0.0 1.3e-30 106.1 0.0 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF114165 - 8e-11 41.7 0.0 1.2e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF114165 - 1.1e-06 28.2 0.0 1.7e-06 27.6 0.0 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF114165 - 2.2e-06 27.4 0.1 6e-06 25.9 0.0 1.6 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF114165 - 0.00014 21.4 0.1 0.3 10.5 0.1 2.1 1 1 1 2 2 2 2 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 ORF114165 - 0.00024 21.1 0.0 0.00043 20.3 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF4623 PF15416.6 ORF114165 - 0.017 13.7 0.0 0.02 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4623) AAA_7 PF12775.7 ORF114165 - 0.022 14.3 0.0 0.052 13.1 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region TniB PF05621.11 ORF114165 - 0.065 12.6 0.0 0.68 9.3 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_24 PF13479.6 ORF114165 - 0.16 11.7 0.2 0.33 10.6 0.0 1.6 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF114165 - 0.18 12.2 0.0 0.28 11.5 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain Zwilch PF09817.9 ORF113899 - 0.012 14.1 0.0 0.016 13.7 0.0 1.1 1 0 0 1 1 1 0 RZZ complex, subunit zwilch CHZ PF09649.10 ORF113899 - 0.077 12.5 0.2 0.13 11.7 0.2 1.3 1 0 0 1 1 1 0 Histone chaperone domain CHZ YrhC PF14143.6 ORF113360 - 0.0057 16.7 0.4 0.055 13.6 0.0 2.2 2 0 0 2 2 2 1 YrhC-like protein DUF2615 PF11027.8 ORF113360 - 0.022 14.9 0.7 0.036 14.2 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2615) NfeD PF01957.18 ORF113360 - 0.064 13.6 0.4 11 6.4 0.1 2.5 3 0 0 3 3 3 0 NfeD-like C-terminal, partner-binding 7tm_1 PF00001.21 ORF113360 - 0.1 11.9 1.3 0.58 9.4 0.1 2.0 1 1 0 2 2 2 0 7 transmembrane receptor (rhodopsin family) MORN PF02493.20 ORF112526 - 6.6e-40 132.7 34.9 5.5e-08 32.3 0.9 6.2 6 0 0 6 6 6 6 MORN repeat Transglut_i_TM PF14400.6 ORF112526 - 0.057 13.5 0.5 0.057 13.5 0.5 1.9 2 0 0 2 2 2 0 Inactive transglutaminase fused to 7 transmembrane helices CBS PF00571.28 ORF111853 - 5.4e-06 26.8 0.0 0.08 13.4 0.0 2.5 2 0 0 2 2 2 2 CBS domain DUF4925 PF16272.5 ORF111853 - 0.1 12.1 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4925) DUF960 PF06124.11 ORF111 - 0.13 12.9 2.1 0.25 12.0 0.7 2.2 2 1 0 2 2 2 0 Staphylococcal protein of unknown function (DUF960) Ras PF00071.22 ORF108639 - 2.1e-63 212.8 1.9 2.5e-63 212.5 1.9 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF108639 - 7e-34 116.6 0.3 1.2e-33 115.9 0.3 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF108639 - 1.7e-15 56.9 0.1 2.3e-15 56.5 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF108639 - 2e-06 27.8 0.0 3.8e-06 27.0 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF108639 - 6.5e-06 25.7 0.7 9.2e-06 25.2 0.7 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF108639 - 0.00027 20.9 0.2 0.51 10.2 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase DNA_pol_E_B PF04042.16 ORF108639 - 0.0062 15.9 0.1 0.0087 15.4 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B SRPRB PF09439.10 ORF108639 - 0.012 15.1 0.2 0.02 14.4 0.2 1.4 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF108639 - 0.02 14.4 0.0 0.046 13.3 0.0 1.7 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain YjzC PF14168.6 ORF108639 - 0.099 13.0 0.3 9.5 6.7 0.0 2.7 3 0 0 3 3 3 0 YjzC-like protein QRPTase_N PF02749.16 ORF108639 - 0.12 12.4 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, N-terminal domain Tcp10_C PF07202.13 ORF108442 - 6.4e-44 150.0 4.4 1.1e-43 149.2 2.7 2.1 1 1 1 2 2 2 1 T-complex protein 10 C-terminus Cuticle_1 PF08140.11 ORF108442 - 0.0022 18.0 1.0 2.8 8.0 0.1 4.5 4 1 1 5 5 5 1 Crustacean cuticle protein repeat POLO_box PF00659.18 ORF108442 - 0.006 16.8 0.4 0.11 12.7 0.0 2.6 1 1 1 2 2 2 1 POLO box duplicated region Lipoprotein_15 PF03640.15 ORF108442 - 0.009 15.5 1.8 2.6 7.6 0.1 2.7 1 1 1 2 2 2 2 Secreted repeat of unknown function DUF559 PF04480.12 ORF108442 - 0.013 15.3 0.1 0.61 10.0 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF559) TGT_C2 PF14810.6 ORF108442 - 0.019 15.0 0.1 4.2 7.6 0.0 3.0 2 1 0 2 2 2 0 Patch-forming domain C2 of tRNA-guanine transglycosylase PD40 PF07676.12 ORF108442 - 0.11 12.5 2.8 1.1 9.2 0.0 3.9 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat FAM194 PF14977.6 ORF108442 - 0.12 11.7 1.0 17 4.6 0.0 3.1 3 2 0 3 3 3 0 FAM194 protein DUF4884 PF16225.5 ORF108442 - 0.18 11.9 2.4 8.9 6.5 0.0 3.6 3 1 1 4 4 4 0 Domain of unknown function (DUF4884) Tfb4 PF03850.14 ORF107585 - 0.049 13.1 1.1 0.064 12.7 1.1 1.2 1 0 0 1 1 1 0 Transcription factor Tfb4 Chordopox_A13L PF05961.11 ORF107437 - 0.029 14.6 0.0 2.5 8.4 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein Cation_ATPase_C PF00689.21 ORF107437 - 0.033 13.9 0.0 0.086 12.5 0.0 1.6 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF107437 - 0.093 13.3 0.0 0.2 12.2 0.0 1.5 1 0 0 1 1 1 0 NLRC4 helical domain HD2 FeoB_associated PF12669.7 ORF107437 - 0.11 12.9 1.7 0.44 11.0 0.4 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NST1 PF13945.6 ORF107437 - 0.16 12.1 6.5 0.24 11.5 6.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator Chloroa_b-bind PF00504.21 ORF10692 - 4.9e-35 121.4 1.1 2.1e-34 119.4 0.1 1.9 2 0 0 2 2 2 1 Chlorophyll A-B binding protein Pkinase PF00069.25 ORF10479 - 1.3e-13 50.9 0.4 1.7e-12 47.3 0.4 2.2 1 1 0 1 1 1 1 Protein kinase domain Pox_ser-thr_kin PF05445.11 ORF10479 - 0.0011 18.0 3.7 0.0017 17.4 3.7 1.2 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Cytochrome_B PF00033.19 ORF103800 - 3.9e-55 186.6 17.3 4.5e-55 186.4 17.3 1.0 1 0 0 1 1 1 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 ORF103800 - 3.9e-27 95.3 6.9 3.9e-27 95.3 6.9 1.5 2 0 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB DUF373 PF04123.13 ORF103800 - 2.5 7.5 5.9 4.4 6.7 6.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF373) MIP PF00230.20 ORF102948 - 3.7e-22 79.2 5.1 4.5e-22 78.9 5.1 1.0 1 0 0 1 1 1 1 Major intrinsic protein ABC_tran PF00005.27 ORF102923 - 2.4e-14 54.0 0.0 3.7e-14 53.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF102923 - 4.4e-05 23.0 0.0 5.1e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF102923 - 0.0048 17.1 0.7 0.12 12.6 0.7 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ABC_ATPase PF09818.9 ORF102923 - 0.018 13.8 0.0 0.024 13.4 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class CortBP2 PF09727.9 ORF102476 - 0.0016 18.3 15.7 0.0016 18.3 15.7 2.0 1 1 1 2 2 2 1 Cortactin-binding protein-2 HD_3 PF13023.6 ORF102476 - 0.2 11.6 8.9 0.17 11.8 7.6 1.5 1 1 0 1 1 1 0 HD domain SlyX PF04102.12 ORF102476 - 0.3 11.7 7.3 5.4 7.7 1.8 2.6 1 1 1 2 2 2 0 SlyX Atg14 PF10186.9 ORF102476 - 0.85 8.6 14.7 0.35 9.9 12.4 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 ORF102476 - 1.5 8.3 10.0 2.1 7.9 10.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF848 PF05852.11 ORF102476 - 2.7 8.1 11.8 1.9 8.6 9.2 1.9 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) DUF4140 PF13600.6 ORF102476 - 7.2 7.1 8.6 6.8e+02 0.8 8.6 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF4407 PF14362.6 ORF102476 - 9.6 5.5 9.5 5.8 6.2 8.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF5453 PF17534.2 NODE_33405_length_650_cov_84.429268_g26602_i0reverse_frame_1 - 0.00061 19.8 0.6 0.001 19.0 0.6 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5453) Clr2 PF10383.9 NODE_33405_length_650_cov_84.429268_g26602_i0reverse_frame_1 - 0.043 14.6 0.0 0.056 14.2 0.0 1.2 1 0 0 1 1 1 0 Transcription-silencing protein Clr2 RRM_1 PF00076.22 NODE_33386_length_650_cov_229.834146_g26584_i0reverse_frame_1 - 3.1e-11 42.9 0.0 6.4e-11 41.9 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TPR_1 PF00515.28 NODE_33386_length_650_cov_229.834146_g26584_i0reverse_frame_1 - 0.33 10.9 3.1 2.2 8.2 0.6 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat p450 PF00067.22 NODE_33370_length_651_cov_3.875000_g26570_i0reverse_frame_1 - 9.3e-13 47.7 0.0 9.3e-13 47.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 GREB1 PF15782.5 NODE_33333_length_651_cov_386.751623_g25094_i1reverse_frame_1 - 3.1 4.8 27.8 3.7 4.6 27.8 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer LAP1C PF05609.12 NODE_33333_length_651_cov_386.751623_g25094_i1reverse_frame_1 - 4.5 6.3 30.7 5.7 5.9 30.7 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Macoilin PF09726.9 NODE_33333_length_651_cov_386.751623_g25094_i1reverse_frame_1 - 4.8 5.6 33.3 5.7 5.4 33.3 1.1 1 0 0 1 1 1 0 Macoilin family DUF2530 PF10745.9 NODE_33333_length_651_cov_386.751623_g25094_i1forward_frame_1 - 0.23 11.7 5.3 2.3 8.5 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2530) Toxin_37 PF11415.8 NODE_33313_length_652_cov_5.850891_g26520_i0forward_frame_2 - 0.043 13.7 0.7 0.12 12.2 0.2 2.0 2 0 0 2 2 2 0 Antifungal peptide termicin Babuvirus_MP PF07234.11 NODE_33309_length_652_cov_30.696921_g26518_i0forward_frame_2 - 0.23 11.7 1.1 0.47 10.6 1.1 1.4 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF3450 PF11932.8 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_2 - 0.016 14.5 4.9 0.075 12.3 1.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) THOC7 PF05615.13 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_2 - 0.02 15.2 5.8 0.88 9.8 1.1 2.2 2 0 0 2 2 2 0 Tho complex subunit 7 TolA_bind_tri PF16331.5 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_2 - 0.033 14.3 0.9 0.033 14.3 0.9 1.8 2 0 0 2 2 2 0 TolA binding protein trimerisation Csm1_N PF18504.1 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_2 - 0.034 14.5 3.3 0.034 14.5 3.3 2.2 2 0 0 2 2 2 0 Csm1 N-terminal domain GIT_CC PF16559.5 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_2 - 0.046 13.6 3.8 0.058 13.3 0.9 2.3 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor APG6_N PF17675.1 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_2 - 0.07 13.6 6.9 0.19 12.2 6.9 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF641 PF04859.12 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_2 - 0.23 11.8 6.4 0.21 11.9 1.4 2.3 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) DUF4140 PF13600.6 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_2 - 0.36 11.3 4.6 1 9.9 0.2 2.5 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) DivIC PF04977.15 NODE_33307_length_652_cov_71.320908_g26516_i0forward_frame_2 - 1.3 8.8 10.4 0.14 11.9 4.3 2.1 2 0 0 2 2 2 0 Septum formation initiator MadM PF03818.13 NODE_33306_length_652_cov_84.583468_g26515_i0forward_frame_2 - 0.099 12.5 0.0 0.25 11.2 0.0 1.7 1 0 0 1 1 1 0 Malonate/sodium symporter MadM subunit ADK_lid PF05191.14 NODE_33289_length_652_cov_190.630470_g26500_i0reverse_frame_2 - 0.067 13.2 2.4 0.99 9.4 0.9 2.6 2 0 0 2 2 2 0 Adenylate kinase, active site lid C1_2 PF03107.16 NODE_33289_length_652_cov_190.630470_g26500_i0reverse_frame_2 - 2.8 8.3 14.6 6.4 7.2 14.6 1.6 1 1 0 1 1 1 0 C1 domain IBR PF01485.21 NODE_33289_length_652_cov_190.630470_g26500_i0reverse_frame_2 - 3.8 7.8 14.4 12 6.2 14.4 1.8 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain DUF4116 PF13475.6 NODE_33281_length_652_cov_371.136143_g26492_i0forward_frame_2 - 7.3e-12 44.8 0.0 3.3e-11 42.7 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4116) pRN1_helical PF13010.6 NODE_33265_length_653_cov_4.037217_g26479_i0forward_frame_2 - 0.057 13.4 1.8 0.081 12.9 1.2 1.6 1 1 0 1 1 1 0 Primase helical domain Uds1 PF15456.6 NODE_33265_length_653_cov_4.037217_g26479_i0forward_frame_2 - 0.89 9.7 7.1 0.091 12.9 0.6 2.3 2 1 1 3 3 3 0 Up-regulated During Septation Pkinase PF00069.25 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 4.7e-46 157.3 0.1 6.5e-46 156.8 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 1e-23 84.0 0.1 1.1e-23 83.8 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.00032 19.6 0.0 0.00035 19.5 0.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.0022 17.1 0.1 0.0034 16.5 0.1 1.2 1 0 0 1 1 1 1 Seadornavirus VP7 Kinase-like PF14531.6 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.012 15.0 0.0 0.017 14.4 0.0 1.3 1 0 0 1 1 1 0 Kinase-like Kdo PF06293.14 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.027 13.8 0.3 0.058 12.7 0.3 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YukC PF10140.9 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.052 12.4 0.2 0.22 10.3 0.0 1.8 1 1 1 2 2 2 0 WXG100 protein secretion system (Wss), protein YukC APH PF01636.23 NODE_33264_length_653_cov_4.584142_g26478_i0reverse_frame_3 - 0.15 12.0 0.1 1.3 8.9 0.1 1.9 2 0 0 2 2 2 0 Phosphotransferase enzyme family AhpC-TSA PF00578.21 ORF99420 - 2.2e-36 124.5 0.0 3.4e-36 123.9 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF99420 - 1.9e-21 76.3 0.0 2.7e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF99420 - 3.4e-12 46.0 0.3 5.9e-12 45.2 0.3 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF99420 - 0.021 14.8 0.1 0.11 12.5 0.1 1.9 2 0 0 2 2 2 0 SCO1/SenC gpW PF02831.15 ORF988 - 0.024 14.6 0.0 0.057 13.3 0.0 1.7 1 0 0 1 1 1 0 gpW DUF4201 PF13870.6 ORF988 - 0.033 13.9 19.3 0.14 11.9 0.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) Lectin_N PF03954.14 ORF988 - 0.87 9.3 8.9 0.34 10.6 1.1 2.6 1 1 2 3 3 3 0 Hepatic lectin, N-terminal domain ECM11 PF15463.6 ORF988 - 0.88 10.2 13.4 0.49 11.0 7.5 2.3 2 0 0 2 2 2 0 Extracellular mutant protein 11 DUF1319 PF07028.11 ORF988 - 0.9 9.8 10.2 1.2 9.4 2.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1319) Nas2_N PF18265.1 ORF988 - 1 9.3 0.1 1 9.3 0.1 3.7 4 1 1 5 5 5 0 Nas2 N_terminal domain Spc7 PF08317.11 ORF988 - 1.7 7.5 27.1 2.4 7.0 5.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Leucyl-specific PF14795.6 ORF988 - 2.2 8.4 4.7 1.8 8.7 0.6 2.7 2 1 0 2 2 2 0 Leucine-tRNA synthetase-specific domain DUF1664 PF07889.12 ORF988 - 2.2 8.3 14.9 2.7 8.0 3.1 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF988 - 3.9 7.8 25.4 20 5.5 13.3 3.0 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) CENP-K PF11802.8 ORF988 - 8 5.9 23.1 0.18 11.3 3.2 2.1 1 1 1 2 2 2 0 Centromere-associated protein K Dynactin PF12455.8 ORF95974 - 0.0049 16.2 3.0 0.0072 15.6 3.0 1.2 1 0 0 1 1 1 1 Dynein associated protein HAP1_N PF04849.13 ORF95974 - 0.0096 15.2 5.2 0.012 14.8 5.2 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region DUF842 PF05811.13 ORF95974 - 0.011 15.5 3.5 0.023 14.4 3.5 1.6 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) Spc7 PF08317.11 ORF95974 - 0.014 14.3 5.9 0.018 13.9 5.9 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF812 PF05667.11 ORF95974 - 0.016 14.1 3.0 0.022 13.7 3.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) V_ATPase_I PF01496.19 ORF95974 - 0.02 12.9 1.4 0.025 12.5 1.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BLOC1_2 PF10046.9 ORF95974 - 0.02 15.2 1.2 0.032 14.5 1.2 1.3 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Golgin_A5 PF09787.9 ORF95974 - 0.02 14.3 5.6 0.027 14.0 5.6 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 FUSC PF04632.12 ORF95974 - 0.021 13.4 0.5 0.026 13.1 0.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family ATG16 PF08614.11 ORF95974 - 0.043 14.0 5.7 0.066 13.4 5.7 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Mod_r PF07200.13 ORF95974 - 0.048 13.8 7.5 0.066 13.3 7.5 1.1 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Fungal_trans_2 PF11951.8 ORF95974 - 0.063 12.1 3.3 0.033 13.0 1.3 1.6 2 0 0 2 2 2 0 Fungal specific transcription factor domain DUF1664 PF07889.12 ORF95974 - 0.067 13.2 1.2 0.11 12.5 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) ZapB PF06005.12 ORF95974 - 0.081 13.4 7.5 0.35 11.3 0.4 2.1 1 1 1 2 2 2 0 Cell division protein ZapB DUF1515 PF07439.11 ORF95974 - 0.086 12.9 0.3 0.13 12.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) DUF935 PF06074.12 ORF95974 - 0.1 11.3 1.5 0.12 11.1 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF935) Sec34 PF04136.15 ORF95974 - 0.18 11.6 6.4 0.32 10.9 6.4 1.3 1 0 0 1 1 1 0 Sec34-like family DUF948 PF06103.11 ORF95974 - 0.2 12.0 0.8 0.98 9.7 1.0 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) TMF_TATA_bd PF12325.8 ORF95974 - 0.21 11.8 8.9 0.22 11.7 5.6 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding SlyX PF04102.12 ORF95974 - 0.62 10.7 14.0 0.64 10.7 7.2 2.3 1 1 1 2 2 2 0 SlyX RmuC PF02646.16 ORF95974 - 0.89 8.6 6.3 1.2 8.2 6.3 1.1 1 0 0 1 1 1 0 RmuC family ABC_tran_CTD PF16326.5 ORF95974 - 1.2 9.4 6.2 3 8.2 5.7 1.8 1 1 1 2 2 2 0 ABC transporter C-terminal domain Y_phosphatase PF00102.27 ORF94913 - 4.5e-08 33.0 0.0 6e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.20 ORF94913 - 4.1e-07 29.9 0.0 1.2e-06 28.3 0.0 1.6 1 1 1 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 ORF94913 - 3.8e-06 27.1 0.1 5.6e-06 26.5 0.1 1.4 1 1 0 1 1 1 1 Tyrosine phosphatase family CDKN3 PF05706.12 ORF94913 - 0.0028 17.4 0.0 0.0035 17.0 0.0 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) PTPlike_phytase PF14566.6 ORF94913 - 0.0051 17.0 0.3 0.01 16.0 0.3 1.6 1 1 0 1 1 1 1 Inositol hexakisphosphate Y_phosphatase2 PF03162.13 ORF94913 - 0.044 13.4 0.3 0.083 12.5 0.3 1.5 1 1 0 1 1 1 0 Tyrosine phosphatase family PTEN_C2 PF10409.9 ORF94913 - 0.045 13.5 0.0 0.075 12.8 0.0 1.4 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein Nucleoporin_FG PF13634.6 ORF91491 - 0.009 16.8 2.7 0.009 16.8 2.7 1.8 2 0 0 2 2 2 1 Nucleoporin FG repeat region PseudoU_synth_2 PF00849.22 ORF91184 - 1.8e-14 54.1 0.2 5.3e-13 49.4 0.0 2.5 2 1 0 2 2 2 1 RNA pseudouridylate synthase Cyc-maltodext_C PF10438.9 ORF91184 - 0.028 14.5 0.0 0.053 13.6 0.0 1.5 1 0 0 1 1 1 0 Cyclo-malto-dextrinase C-terminal domain Inhibitor_I68 PF10468.9 ORF90232 - 0.00027 21.3 5.5 0.00027 21.3 5.5 3.7 2 1 1 3 3 3 1 Carboxypeptidase inhibitor I68 DUF2250 PF10007.9 ORF89026 - 0.25 11.5 3.1 0.43 10.7 0.4 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) DUF4779 PF16009.5 ORF89026 - 2.7 8.0 13.8 0.084 12.9 5.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4779) Med20 PF08612.11 ORF88079 - 1.5e-07 31.1 0.1 1e-06 28.3 0.1 1.9 1 1 0 1 1 1 1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex DUF3978 PF13123.6 ORF86152 - 0.038 13.7 2.3 0.052 13.3 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3978) Homeodomain PF00046.29 ORF85774 - 1.4e-05 24.9 2.5 3.3e-05 23.6 2.5 1.7 1 0 0 1 1 1 1 Homeodomain DUF1548 PF07579.11 ORF85774 - 0.011 16.1 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) dUTPase_2 PF08761.11 ORF85774 - 0.03 14.5 2.1 0.084 13.0 2.1 1.7 1 1 0 1 1 1 0 dUTPase Palm_thioest PF02089.15 ORF8322 - 1.2e-45 156.3 0.0 1.3e-45 156.1 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Axin_b-cat_bind PF08833.10 ORF83143 - 1.4 9.1 4.3 1.2 9.3 0.2 2.3 2 0 0 2 2 2 0 Axin beta-catenin binding domain DUF3930 PF13067.6 ORF82557 - 0.055 13.7 0.1 0.11 12.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3930) DUF3978 PF13123.6 ORF78520 - 0.038 13.7 2.3 0.052 13.3 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3978) Proton_antipo_C PF01010.19 ORF75482 - 0.047 13.3 0.1 0.061 12.9 0.1 1.2 1 0 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Erg28 PF03694.13 ORF74895 - 0.11 12.9 0.8 0.2 12.0 0.8 1.5 1 0 0 1 1 1 0 Erg28 like protein COPI_assoc PF08507.10 ORF73874 - 0.0027 17.8 10.3 0.0027 17.8 10.3 1.7 2 0 0 2 2 2 1 COPI associated protein Arteri_Gl PF00951.18 ORF73874 - 7.3 6.4 11.0 0.6 9.9 4.8 2.4 2 1 0 2 2 2 0 Arterivirus GL envelope glycoprotein DUF3978 PF13123.6 ORF72465 - 0.038 13.7 2.3 0.052 13.3 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3978) Ion_trans PF00520.31 ORF71056 - 2.7e-21 75.9 8.4 3.1e-21 75.7 8.4 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF71056 - 0.57 8.8 13.1 0.83 8.3 0.3 2.1 1 1 1 2 2 2 0 Polycystin cation channel Zn_peptidase_2 PF04298.12 ORF71056 - 0.8 9.1 6.2 1.3 8.4 6.2 1.2 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase End3 PF12761.7 ORF69030 - 0.072 13.3 14.3 0.1 12.8 14.2 1.3 1 1 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 ABC_tran_CTD PF16326.5 ORF69030 - 2.6 8.4 9.9 8.9 6.6 9.6 2.1 1 1 0 1 1 1 0 ABC transporter C-terminal domain Med20 PF08612.11 ORF68704 - 1.5e-07 31.1 0.1 1e-06 28.3 0.1 1.9 1 1 0 1 1 1 1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex Hydrolase_4 PF12146.8 ORF68273 - 1.3e-11 44.2 0.1 2.6e-11 43.3 0.0 1.4 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF68273 - 2.7e-11 44.5 1.4 3.4e-11 44.2 1.4 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF68273 - 5.6e-09 36.0 0.0 1.7e-07 31.2 0.1 2.0 1 1 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF68273 - 0.0051 16.9 0.1 0.17 12.0 0.0 2.3 2 0 0 2 2 2 1 TAP-like protein Esterase PF00756.20 ORF68273 - 0.018 14.7 0.0 0.022 14.4 0.0 1.2 1 0 0 1 1 1 0 Putative esterase Abhydrolase_2 PF02230.16 ORF68273 - 0.22 11.3 0.0 0.33 10.7 0.0 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase PsiE PF06146.12 ORF68256 - 0.019 15.3 1.7 0.04 14.3 1.7 1.6 1 0 0 1 1 1 0 Phosphate-starvation-inducible E Herpes_UL6 PF01763.16 ORF66182 - 0.13 10.7 0.0 0.17 10.3 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like Pneumovirus_M2 PF06436.11 ORF64490 - 0.0077 15.7 0.8 0.011 15.2 0.8 1.3 1 0 0 1 1 1 1 Pneumovirus matrix protein 2 (M2) BRCA-2_OB3 PF09104.10 ORF64490 - 0.034 13.8 0.3 0.095 12.3 0.1 1.9 2 1 0 2 2 2 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 VIT1 PF01988.19 ORF64490 - 0.37 10.6 2.9 3.6 7.4 0.6 2.1 1 1 1 2 2 2 0 VIT family Pkinase PF00069.25 ORF57756 - 2.5e-42 145.1 0.0 3.7e-42 144.5 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57756 - 9.7e-22 77.5 0.0 1.5e-21 76.8 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF57756 - 5e-05 23.3 0.0 7.6e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF57756 - 0.00033 19.7 0.0 0.00033 19.7 0.0 1.6 2 0 0 2 2 2 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF57756 - 0.00038 19.4 0.1 0.0012 17.8 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase Choline_kinase PF01633.20 ORF57756 - 0.036 13.7 0.2 0.036 13.7 0.2 1.8 2 0 0 2 2 2 0 Choline/ethanolamine kinase Molybdop_Fe4S4 PF04879.16 ORF57297 - 2.6 8.1 9.9 7.9 6.6 0.0 2.9 3 0 0 3 3 3 0 Molybdopterin oxidoreductase Fe4S4 domain MCR_alpha_N PF02745.15 ORF55456 - 0.86 8.9 4.3 0.12 11.7 0.2 1.6 2 0 0 2 2 2 0 Methyl-coenzyme M reductase alpha subunit, N-terminal domain Pirin PF02678.16 ORF50657 - 1.6e-25 89.1 0.2 2.6e-25 88.5 0.2 1.4 1 0 0 1 1 1 1 Pirin Pirin_C_2 PF17954.1 ORF50657 - 6e-12 45.6 0.0 1.7e-11 44.2 0.0 1.7 2 0 0 2 2 2 1 Quercetinase C-terminal cupin domain Cupin_2 PF07883.11 ORF50657 - 5.7e-07 29.2 0.1 4.7e-06 26.2 0.2 2.0 2 0 0 2 2 2 1 Cupin domain AMPK1_CBM PF16561.5 ORF50657 - 0.02 15.1 0.0 5 7.4 0.0 2.7 2 1 1 3 3 3 0 Glycogen recognition site of AMP-activated protein kinase DER1 PF04511.15 ORF49090 - 7.3e-26 91.3 14.1 9.5e-26 90.9 14.1 1.0 1 0 0 1 1 1 1 Der1-like family VirB3 PF05101.13 ORF49090 - 4.2 7.7 9.0 0.12 12.6 0.8 2.3 2 1 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein Ank_2 PF12796.7 ORF48331 - 5.5e-10 39.7 0.0 2e-09 37.9 0.0 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF48331 - 3.5e-07 30.6 0.1 0.0019 18.7 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF48331 - 9.7e-07 29.0 0.4 0.48 11.0 0.0 3.7 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF48331 - 1e-05 25.7 1.1 0.00083 19.6 0.1 2.5 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Prominin PF05478.11 ORF47320 - 7.2 4.4 5.1 9.5 4.0 5.1 1.0 1 0 0 1 1 1 0 Prominin PKD_channel PF08016.12 ORF47204 - 0.012 14.3 1.3 0.016 13.9 1.3 1.1 1 0 0 1 1 1 0 Polycystin cation channel MFS_1 PF07690.16 ORF47172 - 1.5e-18 66.9 17.0 4.9e-18 65.2 12.3 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 ORF47172 - 0.029 12.6 3.9 0.017 13.4 0.7 1.9 2 0 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family SH3_19 PF18597.1 ORF46607 - 0.032 14.0 0.0 0.055 13.3 0.0 1.4 1 0 0 1 1 1 0 Myosin X N-terminal SH3 domain SR-25 PF10500.9 ORF46607 - 2.9 7.4 20.5 0.81 9.3 16.5 1.8 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein RelB_N PF18506.1 ORF44684 - 0.12 12.2 0.0 0.31 10.9 0.0 1.7 1 0 0 1 1 1 0 RelB Antitoxin alpha helical domain RAMP PF04901.13 ORF43239 - 0.022 14.8 0.7 0.037 14.0 0.7 1.4 1 0 0 1 1 1 0 Receptor activity modifying family LGFP PF08310.11 ORF43225 - 0.12 12.9 0.0 0.56 10.8 0.1 1.9 2 0 0 2 2 2 0 LGFP repeat HAGH_C PF16123.5 ORF37628 - 2.5e-22 79.2 0.2 3.3e-22 78.8 0.2 1.2 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 ORF37628 - 0.0017 18.4 0.1 0.0029 17.6 0.1 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily COPI_C PF06957.11 ORF3588 - 0.17 10.6 0.0 0.23 10.2 0.0 1.1 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus Pex19 PF04614.12 ORF32157 - 0.23 11.2 10.9 0.59 9.9 10.9 1.7 1 1 0 1 1 1 0 Pex19 protein family ATP_bind_1 PF03029.17 ORF22860 - 1.5e-31 110.0 0.0 2.3e-31 109.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 ORF22860 - 0.0052 16.4 0.0 0.0087 15.6 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain DUF3450 PF11932.8 ORF22860 - 0.0085 15.4 0.1 0.066 12.5 0.0 2.2 1 1 2 3 3 3 1 Protein of unknown function (DUF3450) MAAL_C PF07476.11 ORF22860 - 0.013 14.7 0.0 0.017 14.3 0.0 1.1 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Bromo_TP PF07524.13 ORF22860 - 0.023 14.7 0.1 0.18 11.8 0.0 2.1 1 1 1 2 2 2 0 Bromodomain associated FlaC_arch PF05377.11 ORF22860 - 0.058 13.8 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) GrpE PF01025.19 ORF22860 - 0.088 12.5 0.4 2.5 7.7 0.0 2.0 2 0 0 2 2 2 0 GrpE zf-C5HC2 PF02928.16 ORF21211 - 0.16 12.4 5.7 0.63 10.5 5.7 2.1 1 1 0 1 1 1 0 C5HC2 zinc finger UCH PF00443.29 ORF20771 - 0.0014 18.1 1.0 0.0027 17.3 1.0 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF3914 PF13053.6 ORF20771 - 0.058 13.7 0.8 0.35 11.2 0.0 2.4 3 1 0 3 3 3 0 Protein of unknown function (DUF3914) EF-hand_1 PF00036.32 ORF20771 - 0.059 12.9 0.0 0.15 11.7 0.0 1.8 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF20771 - 0.076 13.0 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain CorC_HlyC PF03471.17 ORF20269 - 1.6e-15 56.9 0.1 2.7e-15 56.1 0.1 1.4 1 0 0 1 1 1 1 Transporter associated domain Axin_b-cat_bind PF08833.10 ORF17926 - 1.4 9.1 4.3 1.2 9.3 0.2 2.3 2 0 0 2 2 2 0 Axin beta-catenin binding domain Rox3 PF08633.10 ORF17778 - 0.095 13.0 0.2 0.12 12.6 0.2 1.3 1 0 0 1 1 1 0 Rox3 mediator complex subunit zf-C2H2_4 PF13894.6 ORF149724 - 0.0084 16.9 3.5 0.015 16.1 3.5 1.4 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF149724 - 0.49 11.0 5.0 0.79 10.3 5.0 1.4 1 0 0 1 1 1 0 Zinc finger, C2H2 type DUF1980 PF09323.10 ORF148429 - 6.9 6.6 8.0 0.92 9.4 0.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) Agouti PF05039.12 ORF144059 - 0.48 11.2 10.2 0.25 12.1 0.5 2.9 3 0 0 3 3 3 0 Agouti protein CBS PF00571.28 ORF140420 - 0.0023 18.3 0.0 1.8 9.1 0.0 2.2 2 0 0 2 2 2 2 CBS domain BAGE PF08180.11 ORF140420 - 0.1 12.7 1.6 0.31 11.2 1.6 1.9 1 1 0 1 1 1 0 B melanoma antigen family ODV-E18 PF10717.9 ORF140255 - 2 8.4 6.0 2.9 7.8 4.9 1.9 2 1 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Paramecium_SA PF01508.16 ORF140255 - 3.3 8.2 11.8 2 8.9 0.7 3.1 3 0 0 3 3 3 0 Paramecium surface antigen domain F-box_5 PF18511.1 ORF13814 - 0.0049 16.4 0.2 0.069 12.7 0.0 2.3 2 0 0 2 2 2 1 F-box F-box-like PF12937.7 ORF13814 - 0.1 12.5 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 F-box-like F-box PF00646.33 ORF13814 - 0.13 12.2 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 F-box domain DUF3978 PF13123.6 ORF137883 - 0.038 13.7 2.3 0.052 13.3 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3978) MutS_V PF00488.21 ORF137210 - 3.3e-80 268.6 0.2 3.8e-80 268.4 0.2 1.0 1 0 0 1 1 1 1 MutS domain V DUF3236 PF11576.8 ORF137210 - 0.053 13.2 0.1 0.17 11.6 0.0 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3236) DUF4796 PF16044.5 ORF137210 - 0.058 13.0 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4796) AAA_27 PF13514.6 ORF137210 - 0.062 12.9 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF137210 - 0.13 12.3 0.1 0.52 10.4 0.0 2.0 2 1 0 2 2 2 0 AAA domain SH3_19 PF18597.1 ORF1371 - 0.032 14.0 0.0 0.055 13.3 0.0 1.4 1 0 0 1 1 1 0 Myosin X N-terminal SH3 domain SR-25 PF10500.9 ORF1371 - 2.9 7.4 20.5 0.81 9.3 16.5 1.8 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein FokI_N PF02981.15 ORF134557 - 0.0017 18.5 0.1 0.0025 18.0 0.1 1.2 1 0 0 1 1 1 1 Restriction endonuclease FokI, recognition domain adh_short_C2 PF13561.6 ORF134338 - 2.2e-55 187.8 1.2 2.5e-55 187.6 1.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF134338 - 7.2e-47 159.4 3.0 8.4e-47 159.2 3.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF134338 - 4.9e-14 52.6 0.3 7.5e-14 52.0 0.3 1.3 1 0 0 1 1 1 1 KR domain Seadorna_Vp10 PF07322.11 ORF134338 - 0.037 13.4 0.1 0.073 12.5 0.0 1.5 2 0 0 2 2 2 0 Seadornavirus Vp10 SPRY PF00622.28 ORF133037 - 7.5e-14 51.9 0.7 1.9e-13 50.5 0.4 1.7 2 0 0 2 2 2 1 SPRY domain CspB_prodomain PF18425.1 ORF133037 - 0.048 13.7 0.1 0.081 12.9 0.1 1.3 1 0 0 1 1 1 0 Csp protease B prodomain Glt_symporter PF03616.14 ORF132289 - 0.082 11.6 2.6 0.14 10.8 1.7 1.7 2 0 0 2 2 2 0 Sodium/glutamate symporter Chromate_transp PF02417.15 ORF131566 - 0.19 11.9 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 Chromate transporter GST_N_3 PF13417.6 ORF128760 - 1.3e-11 44.7 0.0 2.2e-11 44.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF128760 - 1.8e-11 44.2 0.0 3e-11 43.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF128760 - 1.6e-07 31.5 0.0 3.1e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF128760 - 1.2e-05 25.5 0.0 2.1e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF128760 - 2.2e-05 24.6 0.0 3.7e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF128760 - 8.1e-05 22.8 0.1 0.00016 21.8 0.1 1.5 1 0 0 1 1 1 1 Glutaredoxin GST_C_2 PF13410.6 ORF128760 - 0.00017 21.6 0.0 0.0016 18.5 0.0 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain Med20 PF08612.11 ORF128065 - 2.6e-07 30.2 0.0 1.9e-06 27.4 0.0 1.9 1 1 0 1 1 1 1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex Med20 PF08612.11 ORF126648 - 1.5e-07 31.1 0.1 1e-06 28.3 0.1 1.9 1 1 0 1 1 1 1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex YabP PF07873.11 ORF123788 - 0.29 10.9 0.0 0.45 10.3 0.0 1.2 1 0 0 1 1 1 0 YabP family Fib_alpha PF08702.10 ORF122355 - 0.0017 18.6 9.4 0.0022 18.2 9.4 1.1 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family TMF_DNA_bd PF12329.8 ORF122355 - 0.01 15.8 5.7 0.01 15.8 5.7 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding PT PF04886.12 ORF122355 - 0.01 15.4 1.7 0.016 14.7 1.7 1.3 1 0 0 1 1 1 0 PT repeat DUF2333 PF10095.9 ORF122355 - 0.19 10.7 3.4 0.3 10.1 3.4 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2333) RR_TM4-6 PF06459.12 ORF122355 - 9.8 5.9 13.0 12 5.6 13.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Pheromone PF08015.11 ORF121522 - 0.095 13.8 10.5 0.76 10.9 10.5 2.5 1 1 0 1 1 1 0 Fungal mating-type pheromone Homeodomain PF00046.29 ORF120212 - 1.4e-05 24.9 2.5 3.3e-05 23.6 2.5 1.7 1 0 0 1 1 1 1 Homeodomain DUF1548 PF07579.11 ORF120212 - 0.011 16.1 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) dUTPase_2 PF08761.11 ORF120212 - 0.03 14.5 2.1 0.084 13.0 2.1 1.7 1 1 0 1 1 1 0 dUTPase ABC_tran PF00005.27 ORF119302 - 2.2e-32 112.4 0.0 3.2e-32 111.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF119302 - 4e-10 40.0 0.5 0.00065 19.6 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF119302 - 2e-05 24.1 0.0 0.0044 16.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain DUF3584 PF12128.8 ORF119302 - 0.00068 17.3 0.2 0.00088 16.9 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) AAA_30 PF13604.6 ORF119302 - 0.0025 17.6 0.6 0.031 14.0 0.6 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF119302 - 0.004 16.9 0.2 0.008 15.9 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF119302 - 0.0047 17.4 0.3 0.0072 16.9 0.3 1.2 1 0 0 1 1 1 1 AAA domain AAA_13 PF13166.6 ORF119302 - 0.034 12.8 0.0 0.045 12.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF119302 - 0.035 14.4 0.1 0.086 13.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 ORF119302 - 0.041 13.5 0.1 0.065 12.8 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 ORF119302 - 0.044 14.2 0.2 0.077 13.4 0.2 1.7 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF119302 - 0.072 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 ORF119302 - 0.16 12.1 0.3 0.85 9.7 0.3 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.6 ORF119302 - 0.16 12.5 0.1 1 9.9 0.1 2.0 1 1 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF119302 - 0.19 10.9 0.6 2.5 7.2 0.1 2.0 2 0 0 2 2 2 0 NB-ARC domain Zeta_toxin PF06414.12 ORF119302 - 0.21 10.8 0.0 0.39 10.0 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_15 PF13175.6 ORF119302 - 0.25 11.0 0.0 1.8 8.2 0.0 2.2 2 1 1 3 3 3 0 AAA ATPase domain Pkinase PF00069.25 ORF119016 - 4.6e-50 170.4 0.2 5.3e-50 170.2 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF119016 - 3.1e-28 98.8 0.1 3.8e-28 98.5 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase YmzC PF14157.6 ORF119016 - 1.9e-05 24.7 2.0 0.00026 21.0 0.2 2.5 3 0 0 3 3 3 1 YmzC-like protein Kinase-like PF14531.6 ORF119016 - 0.00098 18.5 0.0 0.0033 16.8 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF119016 - 0.058 12.2 0.1 0.08 11.7 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase RIO1 PF01163.22 ORF119016 - 0.089 12.4 1.3 0.15 11.6 1.2 1.5 1 1 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF119016 - 0.16 11.3 0.1 0.23 10.8 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Homeodomain PF00046.29 ORF109683 - 1.4e-05 24.9 2.5 3.3e-05 23.6 2.5 1.7 1 0 0 1 1 1 1 Homeodomain DUF1548 PF07579.11 ORF109683 - 0.011 16.1 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) dUTPase_2 PF08761.11 ORF109683 - 0.03 14.5 2.1 0.084 13.0 2.1 1.7 1 1 0 1 1 1 0 dUTPase zf-C2HC_2 PF13913.6 ORF1096 - 0.49 10.4 5.5 1.4 8.9 5.5 1.9 1 0 0 1 1 1 0 zinc-finger of a C2HC-type Nitroreductase PF00881.24 ORF10925 - 2.1e-33 115.8 0.0 2.5e-33 115.5 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 ORF10925 - 0.00012 21.7 0.1 0.0002 21.0 0.1 1.3 1 0 0 1 1 1 1 Putative TM nitroreductase PV-1 PF06637.11 ORF107568 - 0.019 13.8 0.9 0.027 13.3 0.9 1.2 1 0 0 1 1 1 0 PV-1 protein (PLVAP) ODV-E18 PF10717.9 ORF104300 - 2 8.4 6.0 2.9 7.8 4.9 1.9 2 1 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Paramecium_SA PF01508.16 ORF104300 - 3.3 8.2 11.8 2 8.9 0.7 3.1 3 0 0 3 3 3 0 Paramecium surface antigen domain AAA PF00004.29 ORF103276 - 6.5e-11 42.8 0.0 2.1e-10 41.1 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF103276 - 0.027 14.3 0.0 0.059 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA+ lid domain Beta_protein PF14350.6 ORF103276 - 0.04 13.3 0.0 0.073 12.5 0.0 1.3 1 0 0 1 1 1 0 Beta protein HAD_2 PF13419.6 ORF103276 - 0.13 12.3 0.0 0.3 11.2 0.0 1.9 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase AKAP7_RIRII_bdg PF10470.9 ORF10302 - 0.02 15.0 0.2 0.062 13.4 0.2 1.8 1 0 0 1 1 1 0 PKA-RI-RII subunit binding domain of A-kinase anchor protein EF-hand_7 PF13499.6 ORF102372 - 4.2e-30 104.0 7.1 2.4e-14 53.5 4.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF102372 - 9.6e-28 93.6 13.5 2.9e-08 32.7 0.1 4.6 4 1 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF102372 - 9e-25 86.3 7.8 2.7e-09 36.8 0.6 4.0 2 1 3 5 5 5 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF102372 - 6.9e-20 69.2 10.9 6.1e-07 28.9 0.0 5.2 3 1 2 5 5 5 3 EF-hand domain EF-hand_5 PF13202.6 ORF102372 - 2.1e-12 45.9 13.0 0.00023 20.5 0.0 5.5 4 1 1 5 5 5 3 EF hand EF-hand_4 PF12763.7 ORF102372 - 4.3e-05 23.4 5.4 0.032 14.2 0.2 3.2 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF102372 - 0.00013 22.3 3.9 0.13 12.5 0.1 2.3 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF102372 - 0.0016 17.1 1.5 0.29 9.6 0.1 2.0 1 1 1 2 2 2 2 Family of unknown function (DUF5580) Ino80_Iec3 PF14612.6 ORF102372 - 0.0089 16.7 0.4 0.011 16.4 0.4 1.1 1 0 0 1 1 1 1 IEC3 subunit of the Ino80 complex, chromatin re-modelling SurA_N_2 PF13623.6 ORF102372 - 0.0092 15.9 1.4 2.4 8.0 0.2 2.3 2 0 0 2 2 2 2 SurA N-terminal domain EF-hand_9 PF14658.6 ORF102372 - 0.01 16.2 0.1 4.7 7.6 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain SurA_N_3 PF13624.6 ORF102372 - 0.017 14.9 2.7 0.38 10.5 0.2 2.3 2 1 0 2 2 2 0 SurA N-terminal domain HU-DNA_bdg PF14848.6 ORF102372 - 0.021 14.8 3.0 0.48 10.5 0.3 2.4 2 0 0 2 2 2 0 DNA-binding domain DUF3349 PF11829.8 ORF102372 - 0.023 15.5 0.8 1.5 9.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3349) PTS_2-RNA PF01885.16 ORF102372 - 0.026 14.6 0.3 4.1 7.4 0.0 2.2 1 1 1 2 2 2 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Caleosin PF05042.13 ORF102372 - 0.026 14.5 3.9 5.4 6.9 0.1 3.4 1 1 3 4 4 4 0 Caleosin related protein Herpes_U44 PF04533.13 ORF102372 - 0.029 14.0 3.7 0.44 10.1 0.3 2.1 1 1 1 2 2 2 0 Herpes virus U44 protein TBPIP PF07106.13 ORF102372 - 0.038 13.9 1.0 0.083 12.8 0.1 2.0 2 0 0 2 2 2 0 TBPIP/Hop2 winged helix domain DUF1456 PF07308.13 ORF102372 - 0.054 13.8 5.1 0.66 10.3 0.3 3.1 3 1 0 3 3 3 0 Protein of unknown function (DUF1456) GPS2_interact PF15784.5 ORF102372 - 0.13 12.7 3.7 0.26 11.7 0.2 2.7 2 1 1 3 3 3 0 G-protein pathway suppressor 2-interacting domain Enolase_C PF00113.22 ORF102372 - 0.17 11.1 6.4 0.12 11.6 3.6 1.8 1 1 0 2 2 2 0 Enolase, C-terminal TIM barrel domain EF-hand_11 PF08976.11 ORF102372 - 0.18 12.7 0.8 3.4 8.6 0.1 2.5 1 1 2 3 3 3 0 EF-hand domain gpW PF02831.15 ORF102089 - 0.024 14.6 0.0 0.057 13.3 0.0 1.7 1 0 0 1 1 1 0 gpW DUF4201 PF13870.6 ORF102089 - 0.033 13.9 19.3 0.14 11.9 0.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) Lectin_N PF03954.14 ORF102089 - 0.87 9.3 8.9 0.34 10.6 1.1 2.6 1 1 2 3 3 3 0 Hepatic lectin, N-terminal domain ECM11 PF15463.6 ORF102089 - 0.88 10.2 13.4 0.49 11.0 7.5 2.3 2 0 0 2 2 2 0 Extracellular mutant protein 11 DUF1319 PF07028.11 ORF102089 - 0.9 9.8 10.2 1.2 9.4 2.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1319) Nas2_N PF18265.1 ORF102089 - 1 9.3 0.1 1 9.3 0.1 3.7 4 1 1 5 5 5 0 Nas2 N_terminal domain Spc7 PF08317.11 ORF102089 - 1.7 7.5 27.1 2.4 7.0 5.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Leucyl-specific PF14795.6 ORF102089 - 2.2 8.4 4.7 1.8 8.7 0.6 2.7 2 1 0 2 2 2 0 Leucine-tRNA synthetase-specific domain DUF1664 PF07889.12 ORF102089 - 2.2 8.3 14.9 2.7 8.0 3.1 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF102089 - 3.9 7.8 25.4 20 5.5 13.3 3.0 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) CENP-K PF11802.8 ORF102089 - 8 5.9 23.1 0.18 11.3 3.2 2.1 1 1 1 2 2 2 0 Centromere-associated protein K FGFR3_TM PF18123.1 ORF101228 - 2.9 7.5 15.0 0.66 9.6 3.0 4.2 4 0 0 4 4 4 0 Fibroblast growth factor receptor 3 transmembrane domain Auxin_canalis PF05703.11 ORF101011 - 0.064 13.2 0.6 0.076 12.9 0.6 1.2 1 0 0 1 1 1 0 Auxin canalisation CwfJ_C_1 PF04677.15 NODE_33609_length_646_cov_1.823241_g26779_i0forward_frame_1 - 0.044 13.7 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 Peptidase_M22 PF00814.25 NODE_33601_length_646_cov_3.163666_g26773_i0forward_frame_1 - 8.5e-28 97.8 0.0 1.1e-27 97.5 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family Zip PF02535.22 NODE_33581_length_646_cov_113.536825_g26754_i0reverse_frame_1 - 0.85 8.8 1.7 1.1 8.4 1.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter SLAC1 PF03595.17 NODE_33553_length_647_cov_2.991830_g26734_i0forward_frame_1 - 1.1e-20 74.2 15.5 1.3e-20 73.9 15.5 1.1 1 0 0 1 1 1 1 Voltage-dependent anion channel PhoR PF11808.8 NODE_33553_length_647_cov_2.991830_g26734_i0forward_frame_1 - 7 7.1 12.2 2.9 8.3 0.6 3.4 2 1 2 4 4 4 0 Phosphate regulon sensor protein PhoR # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks104.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks104.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks104.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks104.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:00:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cytochrom_C552 PF02335.15 NODE_33497_length_648_cov_86.092985_g26683_i0forward_frame_1 - 0.11 11.4 0.4 0.11 11.4 0.4 1.1 1 0 0 1 1 1 0 Cytochrome c552 Atx10homo_assoc PF09759.9 NODE_33487_length_648_cov_133.342577_g26674_i0forward_frame_1 - 0.019 15.0 1.2 0.17 11.9 0.3 2.7 2 1 1 3 3 3 0 Spinocerebellar ataxia type 10 protein domain Serine_protease PF18405.1 NODE_33487_length_648_cov_133.342577_g26674_i0forward_frame_1 - 0.12 11.5 0.1 0.16 11.1 0.1 1.2 1 0 0 1 1 1 0 Gammaproteobacterial serine protease DUF3119 PF11317.8 NODE_33481_length_648_cov_228.941272_g26669_i0reverse_frame_1 - 2.3e-33 115.1 0.0 3e-33 114.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3119) Promethin PF16015.5 NODE_33481_length_648_cov_228.941272_g26669_i0reverse_frame_1 - 1.1 9.3 5.6 1.6 8.7 5.6 1.2 1 0 0 1 1 1 0 Promethin Clathrin_bdg PF15045.6 NODE_33471_length_648_cov_499.280587_g26659_i0reverse_frame_1 - 0.044 13.8 0.2 0.083 12.9 0.2 1.4 1 0 0 1 1 1 0 Clathrin-binding box of Aftiphilin, vesicle trafficking SpoVR PF04293.13 NODE_33458_length_649_cov_3.615635_g26650_i0forward_frame_3 - 6.9e-35 120.5 0.2 8.4e-35 120.3 0.2 1.1 1 0 0 1 1 1 1 SpoVR like protein LAGLIDADG_WhiA PF14527.6 NODE_33453_length_649_cov_74.897394_g26645_i0forward_frame_2 - 0.1 12.7 3.2 0.12 12.4 0.3 2.2 2 1 0 2 2 2 0 WhiA LAGLIDADG-like domain DGF-1_C PF11040.8 NODE_33452_length_649_cov_78.190554_g26644_i0reverse_frame_2 - 0.11 12.6 0.1 0.11 12.6 0.1 2.0 3 0 0 3 3 3 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus RunxI PF08504.11 NODE_33452_length_649_cov_78.190554_g26644_i0forward_frame_2 - 0.15 12.8 2.0 3.9 8.2 1.0 2.5 2 1 1 3 3 3 0 Runx inhibition domain Gamma-thionin PF00304.20 NODE_33443_length_649_cov_108.550489_g6149_i3forward_frame_2 - 6.2 7.2 8.6 1.6 9.1 5.2 1.8 2 0 0 2 2 2 0 Gamma-thionin family Fas_alpha_ACP PF18325.1 NODE_33432_length_649_cov_214.195440_g26626_i0forward_frame_2 - 0.11 12.9 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Fatty acid synthase subunit alpha Acyl carrier domain zf-C2H2_7 PF15269.6 NODE_33424_length_649_cov_732.969055_g26618_i0reverse_frame_3 - 0.019 15.0 0.0 0.039 14.0 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger PPR PF01535.20 NODE_33401_length_650_cov_92.800000_g26598_i0forward_frame_3 - 1.5e-11 43.7 2.7 0.052 13.8 0.0 5.6 6 0 0 6 6 6 4 PPR repeat PPR_2 PF13041.6 NODE_33401_length_650_cov_92.800000_g26598_i0forward_frame_3 - 3.7e-10 39.8 0.0 0.0013 18.9 0.0 4.2 3 1 1 4 4 4 3 PPR repeat family PPR_3 PF13812.6 NODE_33401_length_650_cov_92.800000_g26598_i0forward_frame_3 - 3.9e-06 26.8 0.0 0.003 17.6 0.0 2.7 1 1 3 4 4 4 3 Pentatricopeptide repeat domain PPR_long PF17177.4 NODE_33401_length_650_cov_92.800000_g26598_i0forward_frame_3 - 0.0012 18.3 0.4 0.0031 16.9 0.4 1.8 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP UT PF03253.14 NODE_33401_length_650_cov_92.800000_g26598_i0forward_frame_3 - 0.011 14.9 1.0 0.71 8.9 1.3 2.1 2 0 0 2 2 2 0 Urea transporter TPR_12 PF13424.6 NODE_33401_length_650_cov_92.800000_g26598_i0forward_frame_3 - 0.017 15.4 5.4 5.5 7.4 0.4 3.6 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_33401_length_650_cov_92.800000_g26598_i0forward_frame_3 - 0.28 11.4 2.5 15 6.0 0.1 3.6 3 0 0 3 3 3 0 Tetratricopeptide repeat MEF2_binding PF09047.10 NODE_33370_length_651_cov_3.875000_g26570_i0reverse_frame_2 - 0.051 13.4 1.3 0.11 12.4 0.5 2.0 2 0 0 2 2 2 0 MEF2 binding MADF_DNA_bdg PF10545.9 ORF9780 - 1.1 9.7 6.7 0.23 11.8 1.6 2.3 1 1 1 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like DUF4265 PF14085.6 ORF97264 - 0.16 11.9 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) DUF4050 PF13259.6 ORF94577 - 0.21 11.9 7.6 0.4 11.0 7.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) Sec20 PF03908.13 ORF91389 - 4.1e-06 26.6 0.7 4.1e-06 26.6 0.7 2.5 2 1 1 3 3 3 1 Sec20 DASH_Duo1 PF08651.10 ORF91389 - 0.027 14.2 10.2 0.17 11.7 1.8 3.5 3 1 0 3 3 3 0 DASH complex subunit Duo1 DUF2802 PF10975.8 ORF91389 - 0.031 14.4 0.1 0.031 14.4 0.1 3.0 3 2 0 3 3 3 0 Protein of unknown function (DUF2802) DUF1786 PF08735.10 ORF91389 - 0.046 13.0 1.2 0.063 12.6 0.2 1.7 2 0 0 2 2 2 0 Putative pyruvate format-lyase activating enzyme (DUF1786) Synaptobrevin PF00957.21 ORF91389 - 0.048 13.4 0.1 0.048 13.4 0.1 3.3 2 1 2 4 4 4 0 Synaptobrevin RasGAP_C PF03836.15 ORF91389 - 0.33 11.1 23.2 0.73 10.0 5.2 2.4 1 1 1 2 2 2 0 RasGAP C-terminus DUF1664 PF07889.12 ORF91389 - 0.71 9.9 18.7 0.87 9.6 2.6 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Arrestin_C PF02752.22 ORF91389 - 0.81 10.1 4.8 0.34 11.4 1.1 2.0 1 1 1 2 2 2 0 Arrestin (or S-antigen), C-terminal domain SpecificRecomb PF10136.9 ORF91389 - 0.99 7.6 3.7 1.2 7.4 3.7 1.1 1 0 0 1 1 1 0 Site-specific recombinase LMBR1 PF04791.16 ORF91389 - 1.8 7.4 8.8 2.1 7.1 8.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF5089 PF17002.5 ORF91389 - 2 8.3 24.9 0.12 12.2 12.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5089) Fzo_mitofusin PF04799.13 ORF91389 - 3.4 7.2 17.3 1.8 8.1 0.2 3.1 1 1 1 3 3 3 0 fzo-like conserved region DUF4407 PF14362.6 ORF91389 - 5.6 6.2 12.2 9.6 5.5 12.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) YtxH PF12732.7 ORF91389 - 6.6 7.4 12.8 5.7e+03 -2.1 12.8 3.5 1 1 0 1 1 1 0 YtxH-like protein DUF724 PF05266.14 ORF91389 - 7.4 6.3 21.7 2 8.2 10.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Chitin_bind_1 PF00187.19 ORF91317 - 0.016 15.7 0.8 0.063 13.8 0.8 2.1 1 0 0 1 1 1 0 Chitin recognition protein D-ser_dehydrat PF14031.6 ORF90723 - 0.066 13.9 0.0 0.17 12.6 0.0 1.7 1 0 0 1 1 1 0 Putative serine dehydratase domain MORN PF02493.20 ORF90401 - 5.9e-56 183.2 59.2 1e-08 34.5 1.0 9.4 10 0 0 10 10 10 8 MORN repeat DUF3048_C PF17479.2 ORF90401 - 0.49 10.8 18.6 3.6 8.0 0.6 4.2 1 1 2 4 4 4 0 Protein of unknown function (DUF3048) C-terminal domain DUF523 PF04463.12 ORF90401 - 5.1 7.1 5.9 97 3.0 0.1 4.6 1 1 3 5 5 5 0 Protein of unknown function (DUF523) Methyltransf_23 PF13489.6 ORF86044 - 5.4e-12 45.8 0.0 7.6e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF86044 - 2.2e-11 44.4 0.0 5.2e-10 40.0 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF86044 - 2.1e-09 37.9 0.1 9.9e-09 35.7 0.1 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF86044 - 2.5e-09 37.7 0.1 7.7e-08 32.9 0.1 2.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF86044 - 7.9e-09 35.5 0.0 0.00058 19.7 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase domain DREV PF05219.12 ORF86044 - 9.9e-05 21.6 0.0 0.0012 18.0 0.0 2.0 2 0 0 2 2 2 1 DREV methyltransferase NodS PF05401.11 ORF86044 - 0.00039 20.1 0.0 0.76 9.3 0.0 2.1 2 0 0 2 2 2 2 Nodulation protein S (NodS) Methyltransf_9 PF08003.11 ORF86044 - 0.0056 15.7 0.0 2.1 7.2 0.0 2.2 2 1 0 2 2 2 2 Protein of unknown function (DUF1698) CheR PF01739.18 ORF86044 - 0.071 12.6 0.0 0.13 11.7 0.0 1.6 1 1 0 1 1 1 0 CheR methyltransferase, SAM binding domain Mitofilin PF09731.9 ORF85177 - 0.0092 14.9 21.5 0.01 14.7 21.5 1.1 1 0 0 1 1 1 1 Mitochondrial inner membrane protein Zip PF02535.22 ORF85177 - 0.13 11.5 7.2 0.12 11.5 7.2 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter TRP PF06011.12 ORF84752 - 0.00051 18.9 14.0 0.00051 18.9 14.0 1.7 1 1 1 2 2 2 1 Transient receptor potential (TRP) ion channel DUF4748 PF15932.5 ORF84752 - 0.028 14.2 0.1 0.046 13.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) TPR_2 PF07719.17 ORF80974 - 1.1e-06 28.2 1.3 0.04 14.0 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF80974 - 0.00028 20.5 0.0 0.011 15.4 0.0 2.3 2 0 0 2 2 2 1 TPR repeat TPR_16 PF13432.6 ORF80974 - 0.00032 21.3 0.2 0.013 16.1 0.0 2.4 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF80974 - 0.00094 18.9 0.2 0.011 15.5 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF80974 - 0.026 14.9 0.1 0.055 13.9 0.1 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF80974 - 0.043 14.1 0.2 0.087 13.1 0.2 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Axin_b-cat_bind PF08833.10 ORF80974 - 7.6 6.7 12.4 0.32 11.1 5.4 2.4 2 1 0 2 2 2 0 Axin beta-catenin binding domain DUF997 PF06196.12 ORF74333 - 0.044 13.8 0.8 0.099 12.7 0.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF997) NPP PF08384.10 ORF73264 - 0.016 15.2 2.7 5.7 7.1 0.1 3.8 3 0 0 3 3 3 0 Pro-opiomelanocortin, N-terminal region Ephrin_rec_like PF07699.13 ORF70054 - 5e-16 58.2 72.3 0.00028 20.6 3.2 6.3 1 1 8 9 9 9 9 Putative ephrin-receptor like NCD3G PF07562.14 ORF70054 - 2.7e-13 49.6 38.0 0.0015 18.5 5.0 5.4 6 0 0 6 6 6 5 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 ORF70054 - 0.0022 18.3 34.3 0.38 11.2 0.5 7.1 1 1 7 8 8 8 6 TNFR/NGFR cysteine-rich region Opy2 PF09463.10 ORF70054 - 0.091 13.1 47.5 0.59 10.5 5.6 5.6 4 1 2 6 6 6 0 Opy2 protein VSP PF03302.13 ORF70054 - 0.74 8.6 30.5 0.32 9.8 5.8 2.8 1 1 1 2 2 2 0 Giardia variant-specific surface protein PPR_2 PF13041.6 ORF68578 - 7.5e-11 42.1 0.0 5.5e-08 32.9 0.0 2.7 1 1 2 3 3 3 2 PPR repeat family PPR PF01535.20 ORF68578 - 2.6e-07 30.4 1.9 8.5e-05 22.5 0.3 3.1 3 0 0 3 3 3 2 PPR repeat TPR_19 PF14559.6 ORF68578 - 0.072 13.6 0.2 0.15 12.6 0.2 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat LMF1 PF06762.14 ORF66510 - 4.5e-38 131.5 2.1 5.9e-38 131.1 2.1 1.2 1 0 0 1 1 1 1 Lipase maturation factor YscK PF06578.12 ORF66510 - 0.0092 15.5 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 YOP proteins translocation protein K (YscK) BTB PF00651.31 ORF66227 - 1.8e-22 79.6 2.6 1.1e-21 77.2 0.6 2.1 1 1 1 2 2 2 1 BTB/POZ domain ET PF01684.16 ORF66227 - 0.053 13.9 0.2 0.12 12.7 0.0 1.7 1 1 0 1 1 1 0 ET module Flg_bbr_C PF06429.13 ORF6621 - 0.03 14.5 0.5 0.089 12.9 0.5 1.8 1 0 0 1 1 1 0 Flagellar basal body rod FlgEFG protein C-terminal DASH_Dad4 PF08650.10 ORF6621 - 8.3 6.5 10.4 0.11 12.5 0.9 2.7 4 0 0 4 4 4 0 DASH complex subunit Dad4 DUF728 PF05304.12 ORF65780 - 0.1 12.5 0.3 0.1 12.5 0.3 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF728) BshC PF10079.9 ORF65780 - 1.8 7.2 17.2 0.15 10.8 11.1 1.9 1 1 1 2 2 2 0 Bacillithiol biosynthesis BshC U83 PF17465.2 ORF64522 - 0.028 14.6 3.9 0.033 14.3 0.2 2.3 2 0 0 2 2 2 0 Chemokine-like protein, HHV-6 U83 gene product Glucokinase PF02685.16 ORF63600 - 3.4e-84 282.5 0.0 3.8e-84 282.4 0.0 1.0 1 0 0 1 1 1 1 Glucokinase PaaX_C PF08223.11 ORF63600 - 0.015 15.6 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 PaaX-like protein C-terminal domain Maf PF02545.14 ORF63206 - 1.1e-41 142.4 0.1 1.3e-41 142.2 0.1 1.0 1 0 0 1 1 1 1 Maf-like protein DUF5421 PF17458.2 ORF63206 - 0.0082 15.6 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5421) DUF1106 PF06523.11 ORF63206 - 0.011 15.8 0.0 0.024 14.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1106) Pep_M12B_propep PF01562.19 ORF63206 - 0.017 15.3 0.1 0.026 14.7 0.1 1.3 1 1 0 1 1 1 0 Reprolysin family propeptide Ras PF00071.22 ORF59999 - 1.8e-37 128.4 0.3 2.3e-37 128.1 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF59999 - 6.3e-24 84.5 0.1 1.2e-23 83.6 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF59999 - 3.6e-11 42.8 0.2 4.4e-11 42.5 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF59999 - 7.7e-07 28.8 0.4 9.6e-05 22.0 0.1 2.2 1 1 0 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF59999 - 2.4e-06 27.1 0.1 4.4e-06 26.2 0.1 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF59999 - 2.9e-06 26.8 0.2 4.1e-06 26.3 0.2 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF59999 - 7e-06 26.1 0.1 1.2e-05 25.4 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF59999 - 0.00033 19.9 0.0 0.15 11.2 0.0 2.2 2 0 0 2 2 2 2 G-protein alpha subunit DLIC PF05783.11 ORF59999 - 0.001 18.0 0.1 0.022 13.6 0.0 2.3 2 1 0 2 2 2 1 Dynein light intermediate chain (DLIC) PduV-EutP PF10662.9 ORF59999 - 0.0021 17.8 0.2 0.0059 16.4 0.1 1.8 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 ORF59999 - 0.0049 16.4 0.2 0.029 13.9 0.2 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B TniB PF05621.11 ORF59999 - 0.03 13.7 0.0 0.057 12.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein AAA_7 PF12775.7 ORF59999 - 0.035 13.6 0.0 0.058 12.9 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region HIP1_clath_bdg PF16515.5 ORF58386 - 1 10.0 8.3 0.51 11.0 4.3 2.1 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Myb_DNA-bind_5 PF13873.6 ORF55940 - 1.7 8.7 6.1 0.59 10.2 0.3 2.9 4 0 0 4 4 4 0 Myb/SANT-like DNA-binding domain Abhydrolase_2 PF02230.16 ORF52294 - 1e-08 35.3 0.0 2.7e-08 33.9 0.0 1.7 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 ORF52294 - 0.0054 16.6 0.0 0.0063 16.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF52294 - 0.0091 16.6 0.6 0.019 15.6 0.6 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Protamine_P2 PF00841.19 ORF52191 - 0.43 11.1 7.7 0.96 10.0 7.7 1.6 1 0 0 1 1 1 0 Sperm histone P2 PGK PF00162.19 ORF48013 - 0.073 12.0 0.0 0.095 11.6 0.0 1.2 1 0 0 1 1 1 0 Phosphoglycerate kinase Cyanate_lyase PF02560.14 ORF45097 - 5.9e-28 96.5 0.0 8e-28 96.1 0.0 1.2 1 0 0 1 1 1 1 Cyanate lyase C-terminal domain DUF4520 PF15016.6 ORF43369 - 0.15 12.2 0.1 0.33 11.1 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4520) EamA PF00892.20 ORF40272 - 3.5e-16 59.6 14.5 4.1e-16 59.4 14.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family PUNUT PF16913.5 ORF40272 - 0.0026 17.0 2.7 0.0026 17.0 2.7 2.0 1 1 1 2 2 2 1 Purine nucleobase transmembrane transport TPT PF03151.16 ORF40272 - 0.0032 16.9 1.8 0.0032 16.9 1.8 2.0 1 1 1 2 2 2 1 Triose-phosphate Transporter family RseC_MucC PF04246.12 ORF40272 - 0.35 10.8 1.6 0.47 10.4 0.3 1.8 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Globin PF00042.22 ORF33341 - 5e-12 46.4 0.0 7.2e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 Globin Ras PF00071.22 ORF30880 - 8.6e-47 158.7 3.3 1e-46 158.5 3.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF30880 - 6.4e-28 97.4 0.3 1.2e-27 96.5 0.3 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF30880 - 1.2e-16 60.7 0.4 1.5e-16 60.3 0.4 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF30880 - 5.5e-06 25.9 3.5 7.8e-06 25.4 3.5 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF30880 - 0.00012 21.7 1.0 0.00018 21.1 0.9 1.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF30880 - 0.00031 20.2 0.1 0.00038 19.9 0.1 1.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Thioredoxin_14 PF18402.1 ORF30880 - 0.04 13.9 0.1 0.048 13.6 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain DUF5559 PF17714.1 ORF28170 - 0.015 15.2 0.1 0.026 14.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5559) DUF1910 PF08928.10 ORF27579 - 0.019 14.9 1.8 0.019 14.9 1.8 3.8 1 1 2 4 4 4 0 Domain of unknown function (DUF1910) DUF4250 PF14056.6 ORF27579 - 0.071 13.1 5.1 0.099 12.6 1.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4250) Exonuc_VII_L PF02601.15 ORF27579 - 0.79 9.2 23.0 0.23 11.0 19.7 1.7 1 1 1 2 2 2 0 Exonuclease VII, large subunit DUF3333 PF11812.8 ORF27579 - 0.84 9.8 9.3 0.2 11.9 4.5 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF3333) PRKG1_interact PF15898.5 ORF27579 - 3 8.8 35.5 5 8.1 14.8 2.5 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Gal4_dimer PF03902.13 ORF27579 - 8.4 6.6 14.2 1.2 9.4 0.2 4.0 3 2 0 3 3 3 0 Gal4-like dimerisation domain zf-B_box PF00643.24 ORF25279 - 0.068 13.3 1.5 0.068 13.3 1.5 2.2 2 0 0 2 2 2 0 B-box zinc finger Ribosomal_S7e PF01251.18 ORF25231 - 4.3e-69 232.0 3.1 5e-69 231.8 3.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S7e PRMT5_C PF17286.2 ORF19811 - 2.9e-44 151.0 0.0 3.6e-44 150.7 0.0 1.0 1 0 0 1 1 1 1 PRMT5 oligomerisation domain PRMT5 PF05185.16 ORF19811 - 5.7e-18 65.4 0.0 7.5e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase Peptidase_C80 PF11713.8 ORF17883 - 0.24 11.6 0.0 0.34 11.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase C80 family IBR PF01485.21 ORF16908 - 2e-06 27.9 3.1 3.9e-06 27.0 3.1 1.5 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain DUF2976 PF11190.8 ORF16908 - 0.53 10.1 4.5 2.9 7.7 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2976) DUF3417 PF11897.8 ORF151508 - 0.12 12.9 1.5 0.37 11.3 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3417) DUF592 PF04574.13 ORF151508 - 0.31 10.8 3.5 0.71 9.6 1.0 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF592) 60KD_IMP PF02096.20 ORF150924 - 7.3e-08 32.5 0.1 1.1e-07 32.0 0.1 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein ParA PF10609.9 ORF149811 - 1.9e-71 240.4 0.0 2.2e-71 240.2 0.0 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Suc_Fer-like PF06999.12 ORF147317 - 0.19 11.5 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 Sucrase/ferredoxin-like GCD14 PF08704.10 ORF143032 - 4.9e-52 177.0 0.0 7.1e-52 176.5 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 ORF143032 - 0.00012 21.9 0.0 0.0016 18.3 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 ORF143032 - 0.0043 18.0 0.0 0.0071 17.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF143032 - 0.059 13.1 0.0 0.084 12.6 0.0 1.3 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 ORF143032 - 0.14 12.9 0.0 0.24 12.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain NP1-WLL PF11733.8 ORF14275 - 9.2 6.0 6.3 5.8 6.6 4.2 1.7 1 1 1 2 2 2 0 Non-capsid protein NP1 MORN PF02493.20 ORF141848 - 7.9e-27 91.5 40.1 6.7e-07 28.8 2.0 6.9 8 0 0 8 8 8 5 MORN repeat DUF523 PF04463.12 ORF141848 - 0.35 10.9 1.6 39 4.3 0.0 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF523) IBR PF01485.21 ORF141105 - 2e-06 28.0 3.1 3.9e-06 27.0 3.1 1.5 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain DUF2976 PF11190.8 ORF141105 - 0.53 10.1 4.5 2.9 7.7 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2976) TRADD_N PF09034.10 ORF141073 - 0.013 15.5 0.0 0.023 14.8 0.0 1.3 1 0 0 1 1 1 0 TRADD, N-terminal domain MAJIN PF15077.6 ORF13784 - 1.2 8.8 3.6 1.8 8.3 3.6 1.3 1 0 0 1 1 1 0 Membrane-anchored junction protein Ank_2 PF12796.7 ORF136843 - 4.4e-28 97.7 0.5 3.2e-12 46.9 0.0 3.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF136843 - 7.6e-28 96.2 4.3 2.9e-05 24.3 0.0 5.2 2 1 3 5 5 5 5 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF136843 - 1.1e-26 92.8 1.0 2e-11 44.2 0.1 3.5 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF136843 - 3.1e-24 84.3 2.9 0.00061 20.1 0.0 5.8 6 0 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 ORF136843 - 8.7e-21 71.8 2.1 0.0015 18.8 0.0 5.5 6 0 0 6 6 6 4 Ankyrin repeat ENTH PF01417.20 ORF136051 - 0.00017 21.6 0.0 0.00024 21.1 0.0 1.2 1 0 0 1 1 1 1 ENTH domain Dot_icm_IcmQ PF09475.10 ORF136051 - 0.14 11.6 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 Dot/Icm secretion system protein (dot_icm_IcmQ) Ras PF00071.22 ORF134370 - 1.2e-49 168.0 1.9 1.5e-49 167.7 1.9 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF134370 - 1.3e-24 86.7 0.4 2.3e-24 85.9 0.4 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF134370 - 8.9e-16 57.8 0.2 1.1e-15 57.5 0.2 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF134370 - 2.1e-06 27.7 0.2 0.019 14.9 0.1 2.2 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1 PF01926.23 ORF134370 - 3.9e-05 23.7 0.3 6.6e-05 23.0 0.3 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF134370 - 0.00059 19.4 0.6 0.071 12.6 0.1 2.3 2 1 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF134370 - 0.0032 17.0 0.7 0.01 15.4 0.2 1.8 1 1 0 2 2 2 1 Elongation factor Tu GTP binding domain PRORP PF16953.5 ORF134370 - 0.0034 16.9 0.3 0.0045 16.5 0.3 1.2 1 0 0 1 1 1 1 Protein-only RNase P DFF-C PF09033.10 ORF134370 - 0.053 13.4 0.0 0.082 12.8 0.0 1.3 1 0 0 1 1 1 0 DNA Fragmentation factor 45kDa, C terminal domain AAA_23 PF13476.6 ORF134370 - 0.1 13.1 1.3 0.14 12.6 1.3 1.3 1 1 0 1 1 1 0 AAA domain Aminotran_4 PF01063.19 ORF132863 - 9.6e-40 136.8 0.0 1.2e-39 136.5 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV Phage_holin_3_6 PF07332.11 ORF129269 - 0.02 14.9 2.8 0.02 14.9 2.8 1.6 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III MORN PF02493.20 ORF127794 - 1.9e-08 33.7 4.1 0.0029 17.4 0.1 2.4 2 0 0 2 2 2 2 MORN repeat Rubredoxin PF00301.20 ORF127794 - 0.008 16.2 0.1 0.019 15.0 0.1 1.6 1 0 0 1 1 1 1 Rubredoxin DUF4520 PF15016.6 ORF125668 - 0.15 12.2 0.1 0.33 11.1 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4520) LCE PF14672.6 ORF12553 - 0.032 14.8 8.1 0.5 11.0 1.0 2.5 2 0 0 2 2 2 0 Late cornified envelope HIP1_clath_bdg PF16515.5 ORF124489 - 1 10.0 8.3 0.51 11.0 4.3 2.1 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TPR_2 PF07719.17 ORF121746 - 1.1e-06 28.2 1.3 0.04 14.0 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF121746 - 0.00028 20.5 0.0 0.011 15.4 0.0 2.3 2 0 0 2 2 2 1 TPR repeat TPR_16 PF13432.6 ORF121746 - 0.00032 21.3 0.2 0.013 16.1 0.0 2.4 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF121746 - 0.00094 18.9 0.2 0.011 15.5 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF121746 - 0.026 14.9 0.1 0.055 13.9 0.1 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF121746 - 0.043 14.1 0.2 0.087 13.1 0.2 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Axin_b-cat_bind PF08833.10 ORF121746 - 7.6 6.7 12.4 0.32 11.1 5.4 2.4 2 1 0 2 2 2 0 Axin beta-catenin binding domain Ank_2 PF12796.7 ORF121308 - 5.3e-26 91.0 0.1 9.9e-09 35.7 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF121308 - 3.8e-17 62.1 0.4 1.4e-05 25.3 0.0 3.8 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF121308 - 2.8e-15 56.5 0.0 3.2e-05 24.4 0.0 4.0 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF121308 - 4.1e-15 54.4 0.1 0.036 14.6 0.0 4.7 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF121308 - 5.7e-13 48.7 1.2 0.092 13.2 0.0 5.2 5 0 0 5 5 5 3 Ankyrin repeat Abhydrolase_4 PF08386.10 ORF121300 - 0.12 12.6 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein HIP1_clath_bdg PF16515.5 ORF118951 - 1 10.0 8.3 0.51 11.0 4.3 2.1 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF5559 PF17714.1 ORF117366 - 0.015 15.2 0.1 0.026 14.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5559) P3A PF08727.11 ORF115253 - 0.19 11.1 0.4 0.44 10.0 0.0 1.7 2 0 0 2 2 2 0 Poliovirus 3A protein like CCSAP PF15748.5 ORF115089 - 1 9.4 45.6 1.7 8.8 45.6 1.3 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated CDC27 PF09507.10 ORF115089 - 1.4 8.2 51.0 1.6 8.0 51.0 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Zip PF02535.22 ORF115089 - 4.7 6.3 32.0 0.0093 15.2 5.6 2.1 1 1 1 2 2 2 0 ZIP Zinc transporter PE_PPE_C PF12484.8 ORF114458 - 1.7 9.6 11.4 0.14 13.1 5.1 2.2 1 1 1 2 2 2 0 Polymorphic PE/PPE proteins C terminal Methyltransf_11 PF08241.12 ORF112353 - 1.6e-09 38.3 0.0 2.8e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF112353 - 1.1e-07 32.4 0.1 1.9e-07 31.7 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF112353 - 8.2e-07 28.9 0.0 1.4e-06 28.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF112353 - 0.00077 19.0 0.0 0.0043 16.6 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF112353 - 0.0046 16.9 0.0 0.0073 16.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF112353 - 0.0053 17.5 0.0 0.0099 16.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF112353 - 0.015 15.2 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ubie_methyltran PF01209.18 ORF112353 - 0.18 11.1 0.0 0.56 9.5 0.0 1.8 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_9 PF08003.11 ORF112353 - 0.19 10.6 0.0 0.29 10.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Oxidored_q2 PF00420.24 ORF1104 - 2.5e-11 43.1 3.1 2.5e-11 43.1 3.1 2.7 2 2 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Peptidase_M17 PF00883.21 ORF110176 - 2.7e-72 243.7 0.2 3.1e-72 243.5 0.2 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Glyco_hydro_16 PF00722.21 ORF108500 - 0.00016 21.2 0.0 0.0003 20.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 Ribosomal_L13e PF01294.18 ORF107197 - 4.5e-60 202.6 7.4 6.1e-60 202.1 7.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L13e Thioredoxin PF00085.20 ORF105541 - 3.1e-16 59.2 0.0 4.6e-16 58.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin PAPS_reduct PF01507.19 ORF105541 - 6.3e-15 55.6 0.0 9.8e-15 55.0 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Thioredoxin_4 PF13462.6 ORF105541 - 0.0028 17.8 0.0 0.0056 16.9 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin TraF PF13728.6 ORF105541 - 0.0073 16.2 0.0 0.0099 15.7 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF105541 - 0.2 12.0 0.0 26 5.2 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin-like PduV-EutP PF10662.9 ORF100618 - 1.9e-29 102.2 0.0 2.3e-29 102.0 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF100618 - 4.4e-05 23.4 0.0 0.0041 17.1 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF100618 - 0.00011 22.3 0.1 0.00061 19.9 0.1 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase ABC_tran PF00005.27 ORF100618 - 0.00024 21.6 0.0 0.00028 21.4 0.0 1.5 1 1 0 1 1 1 1 ABC transporter FeoB_N PF02421.18 ORF100618 - 0.0012 18.4 0.1 0.0052 16.3 0.1 1.9 1 1 0 1 1 1 1 Ferrous iron transport protein B cobW PF02492.19 ORF100618 - 0.0023 17.5 0.2 0.01 15.4 0.0 1.9 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 ORF100618 - 0.0024 17.9 0.1 0.032 14.3 0.0 2.3 3 0 0 3 3 3 1 Dynamin family GTP_EFTU PF00009.27 ORF100618 - 0.0027 17.3 0.1 1.1 8.7 0.1 2.4 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain AAA_28 PF13521.6 ORF100618 - 0.008 16.4 0.0 0.015 15.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 ORF100618 - 0.018 14.9 0.7 0.59 9.9 0.1 2.2 1 1 1 2 2 2 0 Deoxynucleoside kinase AAA_29 PF13555.6 ORF100618 - 0.066 13.0 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATP_bind_1 PF03029.17 ORF100618 - 0.074 12.8 0.2 0.74 9.6 0.1 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF100618 - 0.11 11.4 1.1 9.9 5.1 0.0 2.5 3 1 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SRPRB PF09439.10 ORF100618 - 0.12 11.8 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_23 PF13476.6 ORF100618 - 0.12 12.8 0.1 0.22 12.0 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF100618 - 0.14 12.7 0.0 0.22 12.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain Roc PF08477.13 ORF100618 - 0.21 11.8 0.0 0.4 10.9 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase RCC1_2 PF13540.6 NODE_33735_length_643_cov_130.432566_g26893_i0forward_frame_1 - 1.3e-08 34.4 10.1 0.03 14.1 0.0 4.5 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat PUA_2 PF14306.6 NODE_33730_length_643_cov_167.246711_g26889_i0forward_frame_1 - 0.11 12.2 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 PUA-like domain HTH_26 PF13443.6 NODE_33699_length_644_cov_3.459770_g26863_i0reverse_frame_1 - 0.075 13.5 0.2 0.15 12.5 0.2 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain CDP-OH_P_transf PF01066.21 NODE_33691_length_644_cov_76.740558_g26855_i0reverse_frame_1 - 2.7e-16 60.1 1.3 3e-16 59.9 0.1 1.7 2 0 0 2 2 2 1 CDP-alcohol phosphatidyltransferase BatA PF07584.11 NODE_33691_length_644_cov_76.740558_g26855_i0reverse_frame_1 - 0.022 15.1 0.1 0.022 15.1 0.1 2.8 2 1 0 2 2 2 0 Aerotolerance regulator N-terminal NCD3G PF07562.14 NODE_33686_length_644_cov_98.699507_g26850_i0reverse_frame_1 - 0.45 10.5 0.0 0.45 10.5 0.0 3.8 4 0 0 4 4 4 0 Nine Cysteines Domain of family 3 GPCR Ank PF00023.30 NODE_33686_length_644_cov_98.699507_g26850_i0reverse_frame_1 - 7.8 7.1 10.8 33 5.2 1.5 4.0 3 2 0 3 3 3 0 Ankyrin repeat FMN_red PF03358.15 NODE_33671_length_644_cov_227.440066_g26836_i0reverse_frame_1 - 1.4e-18 67.1 0.0 2.2e-18 66.4 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase NblA PF04485.12 NODE_33660_length_645_cov_2.095082_g26826_i0reverse_frame_1 - 0.033 14.6 4.7 0.1 13.0 4.7 1.7 1 0 0 1 1 1 0 Phycobilisome degradation protein nblA UPF1_Zn_bind PF09416.10 NODE_33651_length_645_cov_31.262295_g26817_i0reverse_frame_1 - 0.022 14.8 0.4 0.031 14.3 0.4 1.3 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) Cu_bind_like PF02298.17 NODE_33633_length_645_cov_155.090164_g24257_i1forward_frame_1 - 0.0019 18.2 0.4 0.012 15.7 0.1 2.1 2 0 0 2 2 2 1 Plastocyanin-like domain EVI2A PF05399.11 NODE_33633_length_645_cov_155.090164_g24257_i1forward_frame_1 - 8.9 5.8 11.5 11 5.5 0.1 2.2 1 1 1 2 2 2 0 Ectropic viral integration site 2A protein (EVI2A) Methyltransf_16 PF10294.9 NODE_33622_length_645_cov_243.613115_g26790_i0reverse_frame_1 - 3.2e-31 108.4 0.0 4.1e-31 108.1 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase PrmA PF06325.13 NODE_33622_length_645_cov_243.613115_g26790_i0reverse_frame_1 - 0.00014 21.3 0.0 0.00017 21.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 NODE_33622_length_645_cov_243.613115_g26790_i0reverse_frame_1 - 0.003 18.2 0.0 0.0056 17.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_33622_length_645_cov_243.613115_g26790_i0reverse_frame_1 - 0.0075 16.1 0.0 0.0095 15.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_33622_length_645_cov_243.613115_g26790_i0reverse_frame_1 - 0.023 14.2 0.1 0.032 13.8 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_23 PF13489.6 NODE_33622_length_645_cov_243.613115_g26790_i0reverse_frame_1 - 0.05 13.4 0.0 0.079 12.8 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain DUF2160 PF09928.9 NODE_33603_length_646_cov_3.067103_g26774_i1forward_frame_3 - 0.32 11.3 5.8 0.54 10.6 5.8 1.3 1 0 0 1 1 1 0 Predicted small integral membrane protein (DUF2160) Acyl-CoA_ox_N PF14749.6 NODE_33603_length_646_cov_3.067103_g26774_i1forward_frame_2 - 1.9e-10 41.4 0.0 2.7e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Acyl-CoA_dh_M PF02770.19 NODE_33603_length_646_cov_3.067103_g26774_i1forward_frame_2 - 0.0003 20.9 0.0 0.0005 20.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_ox_N PF14749.6 NODE_33602_length_646_cov_3.099836_g26774_i0reverse_frame_2 - 3.4e-09 37.3 0.0 5.4e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Acyl-CoA_dh_M PF02770.19 NODE_33602_length_646_cov_3.099836_g26774_i0reverse_frame_2 - 0.00029 21.0 0.0 0.0005 20.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Toxin_28 PF08115.11 NODE_33596_length_646_cov_76.880524_g26768_i0forward_frame_3 - 0.15 11.9 0.3 0.29 11.0 0.3 1.4 1 0 0 1 1 1 0 SFI toxin family R3H-assoc PF13902.6 NODE_33596_length_646_cov_76.880524_g26768_i0forward_frame_2 - 0.0042 17.5 1.3 0.0098 16.3 1.3 1.7 1 0 0 1 1 1 1 R3H-associated N-terminal domain Striatin PF08232.12 NODE_33596_length_646_cov_76.880524_g26768_i0forward_frame_2 - 0.23 12.0 4.5 0.35 11.4 0.1 2.3 2 1 0 2 2 2 0 Striatin family Herpes_UL14 PF03580.14 NODE_33581_length_646_cov_113.536825_g26754_i0reverse_frame_2 - 0.77 10.0 7.6 0.29 11.4 3.5 2.0 1 1 1 2 2 2 0 Herpesvirus UL14-like protein DUF3433 PF11915.8 NODE_33553_length_647_cov_2.991830_g26734_i0forward_frame_2 - 0.039 14.4 0.1 0.082 13.4 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3433) zf-CCHC_6 PF15288.6 NODE_33521_length_647_cov_256.862745_g26703_i0reverse_frame_3 - 0.5 10.2 4.4 0.45 10.4 0.3 2.8 3 0 0 3 3 3 0 Zinc knuckle PPR PF01535.20 NODE_33517_length_647_cov_361.720588_g26699_i0reverse_frame_2 - 0.016 15.4 0.0 8.8 6.8 0.0 3.1 3 0 0 3 3 3 0 PPR repeat Nuc_sug_transp PF04142.15 NODE_33496_length_648_cov_89.895595_g26682_i0reverse_frame_3 - 8e-17 61.4 0.1 9.9e-17 61.1 0.1 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter PUNUT PF16913.5 NODE_33496_length_648_cov_89.895595_g26682_i0reverse_frame_3 - 0.00054 19.3 1.0 0.0016 17.7 1.0 1.7 1 1 0 1 1 1 1 Purine nucleobase transmembrane transport UAA PF08449.11 NODE_33496_length_648_cov_89.895595_g26682_i0reverse_frame_3 - 0.0013 18.0 0.0 0.0021 17.4 0.0 1.3 1 1 0 1 1 1 1 UAA transporter family ECF-ribofla_trS PF07155.12 NODE_33496_length_648_cov_89.895595_g26682_i0reverse_frame_3 - 0.0015 18.6 3.2 0.0022 18.0 1.4 2.0 2 0 0 2 2 2 1 ECF-type riboflavin transporter, S component GAGA_bind PF06217.12 NODE_33479_length_648_cov_298.776509_g26667_i0reverse_frame_2 - 0.034 14.5 0.3 0.04 14.2 0.3 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Ig_6 PF18452.1 NODE_33471_length_648_cov_499.280587_g26659_i0reverse_frame_3 - 0.12 11.9 0.9 0.74 9.4 0.0 2.5 3 0 0 3 3 3 0 Immunoglobulin domain zf-RING_4 PF14570.6 NODE_33471_length_648_cov_499.280587_g26659_i0forward_frame_2 - 0.0098 15.7 2.3 0.0098 15.7 2.3 2.1 1 1 1 2 2 2 1 RING/Ubox like zinc-binding domain Pro_isomerase PF00160.21 ORF96948 - 2.6e-15 57.0 0.0 4.2e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rotamase_3 PF13616.6 ORF96948 - 2.8e-11 44.0 0.0 4.6e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.21 ORF96948 - 5.6e-11 43.2 0.0 1.1e-10 42.3 0.0 1.5 1 0 0 1 1 1 1 PPIC-type PPIASE domain Snf7 PF03357.21 ORF92745 - 8.5e-19 67.8 27.9 8.5e-19 67.8 27.9 1.8 2 1 1 3 3 3 1 Snf7 DSBA PF01323.20 ORF92745 - 0.055 13.2 5.4 0.065 13.0 4.2 1.7 1 1 1 2 2 2 0 DSBA-like thioredoxin domain DUF2795 PF11387.8 ORF92745 - 0.09 13.0 0.7 0.56 10.5 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2795) DUF2258 PF10015.9 ORF92745 - 0.091 12.9 0.5 0.091 12.9 0.5 2.2 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) YtxH PF12732.7 ORF92745 - 9.9 6.8 16.3 1.5e+04 -3.4 16.3 3.3 1 1 0 1 1 1 0 YtxH-like protein Raptor_N PF14538.6 ORF89542 - 0.0018 18.2 1.5 0.0025 17.8 0.8 1.5 1 1 1 2 2 2 1 Raptor N-terminal CASPase like domain DUF480 PF04337.12 ORF88992 - 1.9e-63 213.1 0.4 3e-63 212.4 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF480 PKcGMP_CC PF16808.5 ORF88992 - 0.051 13.4 0.2 0.17 11.7 0.2 2.0 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase CREPT PF16566.5 ORF88992 - 0.068 13.3 0.2 0.15 12.2 0.0 1.6 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour ANAPC2 PF08672.11 ORF88992 - 0.26 11.8 0.8 1.9 9.1 0.0 2.5 3 0 0 3 3 3 0 Anaphase promoting complex (APC) subunit 2 Lactamase_B PF00753.27 ORF87585 - 8e-34 117.4 0.6 9e-34 117.2 0.6 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 ORF87585 - 0.00065 19.3 0.0 0.00081 19.0 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_5 PF14597.6 ORF87585 - 0.00087 18.8 0.0 0.028 13.9 0.0 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Rrn6 PF10214.9 ORF86301 - 3.2 6.1 6.0 4 5.8 6.0 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor TT_ORF1 PF02956.14 ORF86301 - 7 5.2 11.9 8.9 4.9 11.9 1.1 1 0 0 1 1 1 0 TT viral orf 1 GST_N_3 PF13417.6 ORF85642 - 7.5e-14 51.9 0.0 1.4e-13 51.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF85642 - 1.4e-13 50.9 0.0 2.3e-13 50.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF85642 - 1.8e-09 37.7 0.2 3.7e-09 36.7 0.2 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF85642 - 3.4e-07 30.4 0.4 7e-07 29.4 0.4 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF85642 - 1.1e-06 28.8 0.0 2.1e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF85642 - 6.9e-05 22.8 0.0 0.00013 21.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF85642 - 0.088 12.6 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DUF1639 PF07797.14 ORF84221 - 0.93 9.5 5.6 0.52 10.3 2.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1639) PPR PF01535.20 ORF80688 - 0.00061 19.9 0.1 0.0035 17.5 0.0 2.3 2 0 0 2 2 2 1 PPR repeat PPR_2 PF13041.6 ORF80688 - 0.03 14.5 0.0 0.11 12.8 0.0 1.9 2 0 0 2 2 2 0 PPR repeat family SR-25 PF10500.9 ORF80086 - 0.019 14.6 4.3 0.026 14.2 4.3 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Motile_Sperm PF00635.26 ORF78226 - 8.1e-17 61.0 8.3 1.4e-16 60.3 6.4 2.0 2 0 0 2 2 2 1 MSP (Major sperm protein) domain DUF5001 PF16392.5 ORF78226 - 0.022 14.6 1.1 0.022 14.6 1.1 1.6 2 0 0 2 2 2 0 Ig-like domain V-SNARE PF05008.15 ORF75655 - 3e-07 30.7 2.5 6.7e-07 29.6 0.5 2.2 2 0 0 2 2 2 1 Vesicle transport v-SNARE protein N-terminus DUF349 PF03993.12 ORF75655 - 0.066 13.5 0.4 0.066 13.5 0.4 2.7 3 1 0 3 3 3 0 Domain of Unknown Function (DUF349) V-SNARE_C PF12352.8 ORF75655 - 0.094 13.0 0.6 1.3 9.4 0.1 2.7 3 0 0 3 3 3 0 Snare region anchored in the vesicle membrane C-terminus Spc7 PF08317.11 ORF75655 - 2.4 6.9 10.8 4.5 6.1 3.7 2.2 2 1 0 2 2 2 0 Spc7 kinetochore protein Laminin_I PF06008.14 ORF75655 - 4.3 7.0 10.7 1.9 8.1 0.8 2.6 1 1 2 3 3 3 0 Laminin Domain I DUF883 PF05957.13 ORF75655 - 5.5 7.7 7.0 6.3 7.5 0.6 2.7 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF1068 PF06364.12 ORF66186 - 0.024 14.5 0.4 8 6.3 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1068) Ras PF00071.22 ORF61630 - 6.3e-41 139.7 0.1 8.2e-41 139.3 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF61630 - 6.2e-32 110.3 0.1 9e-32 109.8 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF61630 - 1.8e-09 37.3 0.1 2.4e-09 36.9 0.1 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF61630 - 6.8e-07 29.0 0.2 9.5e-05 22.0 0.2 2.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF61630 - 5.5e-06 26.4 0.0 1.3e-05 25.3 0.0 1.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF61630 - 0.00019 20.9 0.0 0.00024 20.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region TsaE PF02367.17 ORF61630 - 0.00093 19.2 0.1 0.0014 18.7 0.1 1.2 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE TniB PF05621.11 ORF61630 - 0.0017 17.8 0.1 0.035 13.5 0.0 2.1 2 0 0 2 2 2 1 Bacterial TniB protein YwhD PF08741.10 ORF61630 - 0.01 15.5 0.2 0.015 15.0 0.2 1.4 1 1 0 1 1 1 0 YwhD family MMR_HSR1_Xtn PF16897.5 ORF61630 - 0.045 13.8 0.0 0.25 11.4 0.0 2.2 2 1 0 2 2 2 0 C-terminal region of MMR_HSR1 domain G-alpha PF00503.20 ORF61630 - 0.068 12.3 0.1 0.18 10.9 0.0 1.7 1 1 0 2 2 2 0 G-protein alpha subunit AAA_16 PF13191.6 ORF61630 - 0.091 13.1 0.0 0.23 11.8 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF61630 - 0.12 12.2 0.0 3.3 7.6 0.0 2.1 2 0 0 2 2 2 0 RsgA GTPase MCM PF00493.23 ORF61630 - 0.14 11.3 0.0 0.2 10.7 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks105.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks105.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks105.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks105.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 17:59:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Rpn3_C PF08375.11 ORF59052 - 0.037 14.4 0.0 0.066 13.6 0.0 1.3 1 0 0 1 1 1 0 Proteasome regulatory subunit C-terminal AFG1_ATPase PF03969.16 ORF57955 - 3.1e-30 105.3 0.1 3.5e-30 105.1 0.1 1.1 1 0 0 1 1 1 1 AFG1-like ATPase DUF5541 PF17695.1 ORF57070 - 0.08 13.4 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5541) DUF1438 PF07270.11 ORF57070 - 0.097 12.8 1.8 0.13 12.3 1.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1438) Sec1 PF00995.23 ORF56149 - 1.8e-09 37.4 0.0 2e-09 37.2 0.0 1.0 1 0 0 1 1 1 1 Sec1 family UPF0180 PF03698.13 ORF56149 - 0.015 15.4 0.4 0.031 14.4 0.4 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) Exo_endo_phos PF03372.23 ORF51199 - 0.028 13.9 0.0 0.029 13.9 0.0 1.4 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family DJ-1_PfpI PF01965.24 ORF50827 - 1.5e-31 109.4 0.0 1.8e-31 109.2 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family Tom5 PF10642.9 ORF50008 - 0.24 11.4 0.3 0.5 10.4 0.3 1.5 1 0 0 1 1 1 0 Mitochondrial import receptor subunit or translocase HEPN_Apea PF18739.1 ORF4965 - 0.0016 18.8 0.7 0.0048 17.3 0.3 1.8 1 1 1 2 2 2 1 Apea-like HEPN MaoC_dehydratas PF01575.19 ORF49210 - 4.6e-28 97.2 0.0 6e-28 96.9 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain Nmad3 PF18754.1 ORF49210 - 0.1 12.2 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Nucleotide modification associated domain 3 DUSP PF06337.12 ORF489 - 4e-14 53.0 3.6 4e-14 53.0 3.6 1.7 2 0 0 2 2 2 1 DUSP domain Pex14_N PF04695.13 ORF48566 - 6.3 7.4 10.9 1.3 9.6 7.2 1.7 1 1 1 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Complex1_49kDa PF00346.19 ORF48275 - 0.025 13.7 0.0 0.037 13.1 0.0 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Synaptobrevin PF00957.21 ORF46924 - 3.7e-17 61.9 1.7 6.9e-17 61.0 1.7 1.4 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 ORF46924 - 5.3e-16 58.4 1.0 1.1e-15 57.4 1.0 1.5 1 0 0 1 1 1 1 Regulated-SNARE-like domain Prominin PF05478.11 ORF46924 - 0.00086 17.4 0.2 0.00088 17.4 0.2 1.2 1 0 0 1 1 1 1 Prominin SHE3 PF17078.5 ORF46924 - 0.096 12.4 4.7 0.14 11.8 4.7 1.2 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 MAGI_u1 PF16663.5 ORF46924 - 0.3 11.2 1.1 0.63 10.1 1.1 1.5 1 0 0 1 1 1 0 Unstructured region on MAGI Arteri_GP4 PF02497.15 ORF46608 - 0.19 11.9 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 Arterivirus glycoprotein DUF3729 PF12526.8 ORF46608 - 0.56 11.8 5.8 0.97 11.0 5.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3729) Synaptobrevin PF00957.21 ORF44287 - 3.7e-17 61.9 1.7 6.9e-17 61.0 1.7 1.4 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 ORF44287 - 5.3e-16 58.4 1.0 1.1e-15 57.4 1.0 1.5 1 0 0 1 1 1 1 Regulated-SNARE-like domain Prominin PF05478.11 ORF44287 - 0.00086 17.4 0.2 0.00088 17.4 0.2 1.2 1 0 0 1 1 1 1 Prominin SHE3 PF17078.5 ORF44287 - 0.096 12.4 4.7 0.14 11.8 4.7 1.2 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 MAGI_u1 PF16663.5 ORF44287 - 0.3 11.2 1.1 0.63 10.1 1.1 1.5 1 0 0 1 1 1 0 Unstructured region on MAGI TPH PF13868.6 ORF43329 - 1.5e-05 23.7 73.6 1.6e-05 23.6 73.6 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF4342 PF14242.6 ORF43329 - 2.8 8.0 4.5 3.2 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4342) RGS PF00615.19 ORF43329 - 3.2 8.0 27.3 0.38 11.0 9.0 2.7 1 1 1 2 2 2 0 Regulator of G protein signaling domain HEPN_Apea PF18739.1 ORF42743 - 0.0024 18.3 0.6 0.0046 17.4 0.3 1.6 1 1 1 2 2 2 1 Apea-like HEPN ACC_epsilon PF13822.6 ORF4167 - 0.079 13.7 1.9 0.16 12.6 1.9 1.5 1 0 0 1 1 1 0 Acyl-CoA carboxylase epsilon subunit MORN PF02493.20 ORF40527 - 3.7e-05 23.4 6.6 0.00035 20.3 0.3 3.9 5 0 0 5 5 5 2 MORN repeat BPD_transp_1 PF00528.22 ORF39732 - 3e-24 85.8 11.1 3.7e-24 85.5 11.1 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BTB PF00651.31 ORF37809 - 1.2e-24 86.7 2.9 4.9e-24 84.7 1.1 2.1 1 1 1 2 2 2 1 BTB/POZ domain BACK PF07707.15 ORF37809 - 1.1e-06 28.6 1.5 7.6e-06 26.0 0.3 2.6 2 1 1 3 3 3 1 BTB And C-terminal Kelch CAMSAP_CH PF11971.8 ORF37809 - 0.13 12.2 2.2 0.19 11.6 1.3 1.8 2 0 0 2 2 2 0 CAMSAP CH domain RHH_4 PF13467.6 ORF37740 - 0.049 13.5 0.1 0.14 12.0 0.1 1.7 1 0 0 1 1 1 0 Ribbon-helix-helix domain Ribosomal_S7e PF01251.18 ORF37739 - 4.3e-69 232.0 3.1 4.9e-69 231.8 3.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S7e BcsB PF03170.13 ORF3753 - 0.15 10.4 0.1 0.19 10.0 0.1 1.1 1 0 0 1 1 1 0 Bacterial cellulose synthase subunit Crust_neurohorm PF01147.17 ORF36240 - 0.053 13.3 0.1 0.13 12.0 0.1 1.6 1 0 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family Pertus-S5-tox PF09276.10 ORF36132 - 0.12 12.4 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Pertussis toxin S5 subunit YbgT_YccB PF08173.11 ORF35416 - 0.37 11.0 1.9 1 9.5 1.9 1.8 1 0 0 1 1 1 0 Membrane bound YbgT-like protein PKS_DE PF18369.1 ORF34965 - 1.3 9.7 6.7 7 7.3 0.1 2.9 3 0 0 3 3 3 0 Polyketide synthase dimerisation element domain CinA PF02464.17 ORF32065 - 1.4e-60 203.3 2.5 1.8e-60 203.0 2.5 1.1 1 0 0 1 1 1 1 Competence-damaged protein Kelch_1 PF01344.25 ORF31050 - 3.3e-47 157.8 3.4 5.6e-13 48.2 0.2 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_6 PF13964.6 ORF31050 - 1.3e-28 98.2 0.0 9.1e-08 32.1 0.0 4.1 3 1 1 4 4 4 4 Kelch motif Kelch_3 PF13415.6 ORF31050 - 8.8e-18 64.1 2.8 9.5e-05 22.6 0.2 4.1 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF31050 - 9.9e-14 51.1 0.0 0.0002 21.3 0.0 3.8 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF31050 - 1.9e-08 33.9 3.0 0.0068 16.3 0.1 4.3 4 0 0 4 4 4 3 Kelch motif Kelch_5 PF13854.6 ORF31050 - 4.4e-05 23.4 10.2 0.84 9.7 0.3 4.8 4 1 1 5 5 5 4 Kelch motif YjbE PF11106.8 ORF31050 - 0.0091 16.2 7.4 0.098 12.9 0.2 3.4 3 0 0 3 3 3 1 Exopolysaccharide production protein YjbE DUF4748 PF15932.5 ORF30926 - 5.2 6.9 7.5 0.36 10.6 1.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4748) DUF1295 PF06966.12 ORF29147 - 2.4e-43 148.3 0.1 2.8e-43 148.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF29147 - 2.9e-07 30.6 0.6 4.1e-07 30.1 0.6 1.4 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 ORF29147 - 3.4e-07 30.6 2.7 3.4e-07 30.6 2.7 1.8 2 0 0 2 2 2 1 Phospholipid methyltransferase ICMT PF04140.14 ORF29147 - 4.5e-05 23.8 1.0 4.5e-05 23.8 1.0 1.5 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.17 ORF29147 - 0.0012 17.7 3.0 0.0018 17.1 2.9 1.4 1 1 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family DsbD_2 PF13386.6 ORF29147 - 0.0054 16.7 0.8 0.0091 16.0 0.1 1.7 2 0 0 2 2 2 1 Cytochrome C biogenesis protein transmembrane region DUF996 PF06195.13 ORF29147 - 1.5 9.1 9.8 18 5.6 0.3 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF996) DUF973 PF06157.11 ORF29147 - 1.8 7.6 6.7 0.061 12.4 1.1 1.3 2 0 0 2 2 2 0 Protein of unknown function (DUF973) RHH_4 PF13467.6 ORF25230 - 0.049 13.5 0.1 0.14 12.0 0.1 1.7 1 0 0 1 1 1 0 Ribbon-helix-helix domain Ig_GlcNase PF18368.1 ORF24688 - 0.2 11.8 0.2 0.34 11.1 0.2 1.4 1 0 0 1 1 1 0 Exo-beta-D-glucosaminidase Ig-fold domain Pro_isomerase PF00160.21 ORF23661 - 4e-11 43.4 0.0 1.5e-10 41.5 0.0 1.8 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WW_FCH_linker PF16623.5 ORF23661 - 0.024 15.4 0.2 0.044 14.5 0.2 1.4 1 0 0 1 1 1 0 Unstructured linker region between on GAS7 protein Pmp3 PF01679.17 ORF23532 - 0.22 11.8 2.7 1 9.6 0.0 2.9 2 1 1 3 3 3 0 Proteolipid membrane potential modulator Bac_DNA_binding PF00216.21 ORF22257 - 0.022 14.9 0.0 0.14 12.4 0.0 2.1 1 1 1 2 2 2 0 Bacterial DNA-binding protein Ras PF00071.22 ORF2217 - 8.4e-51 171.8 0.3 9.9e-51 171.6 0.3 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF2217 - 2.1e-31 108.6 0.1 3e-31 108.1 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF2217 - 1.4e-16 60.5 0.4 1.8e-16 60.1 0.4 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF2217 - 1.7e-07 31.0 0.1 1.5e-06 27.9 0.0 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF2217 - 6.6e-07 29.4 0.0 9.7e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF2217 - 6.6e-05 22.4 0.2 8.5e-05 22.0 0.2 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF2217 - 0.00018 21.5 0.2 0.0087 16.0 0.2 2.1 2 0 0 2 2 2 1 RsgA GTPase SRPRB PF09439.10 ORF2217 - 0.00096 18.6 0.2 0.0013 18.2 0.2 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit ATPase_2 PF01637.18 ORF2217 - 0.0026 17.7 0.9 0.0064 16.4 0.1 1.7 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea PduV-EutP PF10662.9 ORF2217 - 0.004 16.9 0.3 0.061 13.1 0.3 2.3 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation MMR_HSR1_Xtn PF16897.5 ORF2217 - 0.008 16.2 0.4 0.015 15.3 0.4 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain TniB PF05621.11 ORF2217 - 0.014 14.8 0.1 0.06 12.8 0.0 2.0 2 0 0 2 2 2 0 Bacterial TniB protein FeoB_N PF02421.18 ORF2217 - 0.015 14.9 0.3 0.14 11.7 0.3 2.0 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA PF00004.29 ORF2217 - 0.13 12.7 0.1 1.7 9.1 0.0 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) UL97 PF06734.12 ORF21347 - 0.095 12.6 0.1 0.51 10.2 0.1 1.9 1 1 1 2 2 2 0 UL97 GST_C_4 PF14834.6 ORF17815 - 2.9e-71 237.2 0.3 3.8e-71 236.9 0.3 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF17815 - 3.7e-12 46.4 0.0 5.9e-12 45.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF17815 - 7.2e-12 45.6 0.0 1.2e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF17815 - 1.9e-08 34.5 0.0 2.9e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF17815 - 0.0016 19.2 0.0 0.025 15.3 0.0 2.2 2 0 0 2 2 2 1 Glutathione S-transferase N-terminal domain MetOD2 PF18548.1 ORF15883 - 0.042 14.0 2.7 4 7.6 0.0 3.1 2 1 1 3 3 3 0 Metanogen output domain 2 PurL_C PF16904.5 ORF15883 - 0.079 13.3 0.1 0.18 12.1 0.1 1.6 1 0 0 1 1 1 0 Phosphoribosylformylglycinamidine synthase II C-terminus SRP54_N PF02881.19 ORF15883 - 2.5 8.4 6.3 28 5.0 0.1 2.9 3 0 0 3 3 3 0 SRP54-type protein, helical bundle domain His_Phos_1 PF00300.22 ORF152931 - 2.1e-57 194.0 0.8 2.4e-57 193.8 0.8 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PTH2 PF01981.16 ORF152931 - 0.056 13.7 0.2 0.12 12.7 0.1 1.6 1 1 1 2 2 2 0 Peptidyl-tRNA hydrolase PTH2 Abhydrolase_9 PF10081.9 ORF152931 - 0.13 11.3 0.0 0.21 10.6 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta-hydrolase family CLZ PF16526.5 ORF152375 - 0.011 16.1 15.9 0.011 16.1 15.9 2.9 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Jnk-SapK_ap_N PF09744.9 ORF152375 - 0.016 15.4 29.0 0.016 15.4 29.0 2.4 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 Spc7 PF08317.11 ORF152375 - 1.2 8.0 30.0 0.75 8.6 26.5 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein Allexi_40kDa PF05549.11 ORF152375 - 6.9 6.1 10.6 0.43 10.1 5.9 1.6 2 0 0 2 2 2 0 Allexivirus 40kDa protein BRI3BP PF14965.6 ORF152375 - 7.7 6.0 4.7 14 5.2 4.7 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 Hydrolase_4 PF12146.8 ORF152012 - 3.9e-07 29.6 0.0 0.0029 16.9 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 FSH1 PF03959.13 ORF152012 - 0.00013 21.7 0.0 0.00018 21.2 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S9 PF00326.21 ORF152012 - 0.0003 20.3 0.0 0.012 15.1 0.0 2.1 1 1 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 ORF152012 - 0.0036 16.9 0.0 0.0046 16.5 0.0 1.3 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 ORF152012 - 0.078 12.9 0.0 5.6 6.8 0.0 2.5 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Asp2 PF16929.5 ORF152012 - 0.1 11.5 0.0 0.2 10.6 0.0 1.4 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter Abhydrolase_2 PF02230.16 ORF152012 - 0.13 12.0 0.6 0.31 10.8 0.6 1.7 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase YbgT_YccB PF08173.11 ORF151612 - 0.37 11.0 1.9 1 9.5 1.9 1.8 1 0 0 1 1 1 0 Membrane bound YbgT-like protein NinD PF17466.2 ORF150446 - 0.42 10.7 7.2 0.053 13.6 2.8 1.9 2 0 0 2 2 2 0 Family of unknown function FYVE PF01363.21 ORF149584 - 4.9e-11 42.6 16.3 5.4e-10 39.3 16.3 2.1 1 1 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF149584 - 1.3e-06 28.6 8.9 1.3e-06 28.6 8.9 3.2 2 1 1 3 3 3 1 FYVE-type zinc finger Prefoldin_2 PF01920.20 ORF149584 - 0.00037 20.4 13.0 0.00037 20.4 13.0 3.3 1 1 1 2 2 1 1 Prefoldin subunit Spc7 PF08317.11 ORF149584 - 0.083 11.8 34.9 0.11 11.4 33.5 1.7 1 1 0 1 1 1 0 Spc7 kinetochore protein Atg14 PF10186.9 ORF149584 - 0.09 11.9 41.7 0.93 8.5 41.7 2.3 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 HMMR_N PF15905.5 ORF149584 - 0.18 11.3 41.1 0.15 11.5 40.3 1.3 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal TPR_MLP1_2 PF07926.12 ORF149584 - 0.2 11.7 30.6 0.13 12.3 15.2 1.6 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein THOC7 PF05615.13 ORF149584 - 0.22 11.8 23.0 0.013 15.8 15.7 2.1 1 1 1 2 2 2 0 Tho complex subunit 7 C1_1 PF00130.22 ORF149584 - 0.68 9.9 12.6 1.3 9.0 12.6 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Prok-RING_2 PF14445.6 ORF149584 - 0.75 10.0 7.8 11 6.3 8.7 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 2 DUF4164 PF13747.6 ORF149584 - 1.5 9.1 19.0 0.11 12.8 12.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) DUF4845 PF16137.5 ORF149584 - 5 8.0 8.2 4 8.4 5.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4845) AFG1_ATPase PF03969.16 ORF149159 - 2.6e-30 105.6 0.0 2.9e-30 105.4 0.0 1.1 1 0 0 1 1 1 1 AFG1-like ATPase Raptor_N PF14538.6 ORF146670 - 0.0018 18.2 1.5 0.0025 17.8 0.8 1.5 1 1 1 2 2 2 1 Raptor N-terminal CASPase like domain Fib_alpha PF08702.10 ORF140668 - 0.012 15.8 3.8 0.012 15.8 3.8 1.6 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 ORF140668 - 0.04 13.5 6.3 0.049 13.2 6.3 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit NPV_P10 PF05531.12 ORF140668 - 0.042 14.3 5.6 0.84 10.1 1.9 2.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DNA_ligase_A_N PF04675.14 ORF140668 - 0.056 13.8 4.4 0.17 12.2 4.4 1.9 1 1 0 1 1 1 0 DNA ligase N terminus Jnk-SapK_ap_N PF09744.9 ORF140668 - 0.066 13.4 10.4 0.1 12.8 10.2 1.4 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF948 PF06103.11 ORF140668 - 0.18 12.1 5.1 1.8 8.9 0.5 3.3 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) DUF4407 PF14362.6 ORF140668 - 0.3 10.4 6.5 0.38 10.1 6.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Vps51 PF08700.11 ORF140668 - 0.32 11.1 10.3 0.18 11.9 3.7 2.9 2 1 0 2 2 2 0 Vps51/Vps67 Phage_GPO PF05929.11 ORF140668 - 0.35 10.4 5.0 0.44 10.1 5.0 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF2408 PF10303.9 ORF140668 - 0.47 11.0 7.3 0.7 10.5 7.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Seryl_tRNA_N PF02403.22 ORF140668 - 0.65 10.3 8.0 5.1 7.4 8.0 2.2 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Synaptobrevin PF00957.21 ORF140668 - 0.69 9.8 3.6 0.38 10.6 0.8 1.9 2 0 0 2 2 2 0 Synaptobrevin FUSC PF04632.12 ORF140668 - 0.81 8.1 14.1 0.051 12.1 2.4 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein family Fzo_mitofusin PF04799.13 ORF140668 - 2.5 7.6 7.8 0.6 9.6 2.7 2.2 1 1 2 3 3 3 0 fzo-like conserved region DUF1664 PF07889.12 ORF140668 - 7.6 6.6 6.8 2.9 8.0 3.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 ORF140668 - 9.1 6.7 8.4 4.7 7.6 2.4 2.6 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 PPR_2 PF13041.6 ORF139968 - 3.1e-33 113.7 0.0 4.6e-07 29.9 0.0 5.3 1 1 5 6 6 6 6 PPR repeat family PPR PF01535.20 ORF139968 - 7.2e-22 76.1 0.0 8.6e-05 22.5 0.0 5.9 6 0 0 6 6 6 5 PPR repeat PPR_3 PF13812.6 ORF139968 - 6.9e-18 64.5 0.0 6.8e-06 26.1 0.0 4.2 2 1 3 5 5 5 5 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF139968 - 6.2e-15 54.6 0.0 0.00023 20.8 0.0 6.1 6 0 0 6 6 6 5 PPR repeat PPR_long PF17177.4 ORF139968 - 1.9e-05 24.1 0.0 0.053 12.9 0.0 3.0 1 1 2 3 3 3 3 Pentacotripeptide-repeat region of PRORP DUF4181 PF13789.6 ORF138662 - 7 7.0 16.5 0.67 10.2 10.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4181) Thiamine_BP PF01910.17 ORF138500 - 0.11 12.5 0.1 0.21 11.5 0.1 1.5 1 0 0 1 1 1 0 Thiamine-binding protein DUF5541 PF17695.1 ORF138169 - 0.079 13.4 0.0 0.12 12.9 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5541) DUF1438 PF07270.11 ORF138169 - 0.093 12.8 1.7 0.14 12.2 0.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1438) Kelch_1 PF01344.25 ORF137440 - 3.8e-32 109.6 4.6 1.6e-11 43.6 0.7 4.9 4 1 0 4 4 4 4 Kelch motif Kelch_6 PF13964.6 ORF137440 - 5.2e-27 93.2 1.7 2.4e-05 24.4 0.1 4.1 4 0 0 4 4 4 4 Kelch motif Kelch_5 PF13854.6 ORF137440 - 1.2e-15 57.0 1.3 9.5e-06 25.5 0.1 4.2 4 0 0 4 4 4 2 Kelch motif Kelch_4 PF13418.6 ORF137440 - 5.3e-15 55.2 1.0 0.0023 17.9 0.0 4.7 2 2 2 4 4 4 4 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF137440 - 4.1e-11 42.4 0.9 0.0001 22.1 0.2 4.2 4 0 0 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF137440 - 4.3e-08 33.3 3.6 0.05 13.9 0.1 4.7 4 1 0 4 4 4 3 Galactose oxidase, central domain ubiquitin PF00240.23 ORF133693 - 0.15 11.8 0.0 0.38 10.6 0.0 1.6 1 1 0 1 1 1 0 Ubiquitin family RAMP4 PF06624.12 ORF132808 - 1.2 9.2 9.0 0.19 11.8 1.7 3.0 3 0 0 3 3 3 0 Ribosome associated membrane protein RAMP4 Holin_SPP1 PF04688.13 ORF132605 - 0.021 15.0 0.0 0.046 13.9 0.0 1.5 1 0 0 1 1 1 0 SPP1 phage holin DASH_Dam1 PF08653.10 ORF132194 - 0.22 11.3 4.0 6.7 6.6 0.0 3.0 3 0 0 3 3 3 0 DASH complex subunit Dam1 Tma16 PF11176.8 ORF132194 - 0.57 10.1 9.4 0.28 11.0 7.0 1.6 1 1 1 2 2 2 0 Translation machinery-associated protein 16 V_ATPase_I PF01496.19 ORF132194 - 0.67 7.8 7.8 0.75 7.6 7.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Seryl_tRNA_N PF02403.22 ORF132194 - 2 8.7 10.7 0.058 13.6 2.1 2.5 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain DUF724 PF05266.14 ORF132194 - 2 8.2 13.6 0.47 10.3 7.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) T3SSipB PF16535.5 ORF132194 - 2.3 8.7 10.6 0.55 10.7 2.0 2.3 2 1 0 2 2 2 0 Type III cell invasion protein SipB TMCO5 PF14992.6 ORF132194 - 4.4 6.8 14.5 19 4.7 14.5 1.9 1 1 0 1 1 1 0 TMCO5 family TPH PF13868.6 ORF132147 - 1.5e-05 23.7 73.6 1.6e-05 23.6 73.6 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF4342 PF14242.6 ORF132147 - 2.8 8.0 4.5 3.2 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4342) RGS PF00615.19 ORF132147 - 3.2 8.0 27.3 0.38 11.0 9.0 2.7 1 1 1 2 2 2 0 Regulator of G protein signaling domain PapG_C PF03628.13 ORF132124 - 0.34 10.8 1.6 21 5.0 0.1 2.3 2 0 0 2 2 2 0 PapG chaperone-binding domain LRR_4 PF12799.7 ORF126943 - 1.5e-21 76.1 19.5 3.2e-06 27.4 1.6 4.5 4 0 0 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF126943 - 2.7e-19 68.7 25.6 9.2e-06 25.3 0.6 4.8 2 1 4 6 6 6 6 Leucine rich repeat LRR_9 PF14580.6 ORF126943 - 7.4e-08 32.1 9.4 0.00044 19.8 0.5 2.7 1 1 2 3 3 3 2 Leucine-rich repeat CSTF_C PF14304.6 ORF126943 - 0.0036 16.8 2.8 0.014 15.0 0.1 3.0 3 0 0 3 3 3 1 Transcription termination and cleavage factor C-terminal LRR_6 PF13516.6 ORF126943 - 0.0044 16.9 8.1 26 5.2 0.2 6.6 7 0 0 7 7 7 1 Leucine Rich repeat LRR_1 PF00560.33 ORF126943 - 3.3 8.6 20.7 81 4.4 0.1 6.7 6 1 0 6 6 6 0 Leucine Rich Repeat Rib_5-P_isom_A PF06026.14 ORF124973 - 6.3e-44 149.6 0.2 8.2e-44 149.2 0.2 1.2 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DUF4282 PF14110.6 ORF124689 - 4.3 8.1 9.5 23 5.8 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) TMEM208_SND2 PF05620.11 ORF124689 - 8.9 6.1 12.8 0.49 10.2 1.3 2.5 1 1 1 2 2 2 0 SRP-independent targeting protein 2/TMEM208 GST_N_3 PF13417.6 ORF122244 - 3.3e-14 53.0 0.0 5.8e-14 52.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF122244 - 1.3e-13 51.1 0.0 2.1e-13 50.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF122244 - 1.2e-09 38.2 0.1 3.7e-09 36.7 0.2 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF122244 - 3.8e-07 30.2 0.4 6.7e-07 29.4 0.4 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF122244 - 2.6e-06 27.6 0.0 4.8e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF122244 - 6.9e-05 22.8 0.0 0.00013 21.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF122244 - 0.09 12.6 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain CSN7a_helixI PF18392.1 ORF122213 - 5.5 7.0 6.1 15 5.6 0.3 3.1 3 0 0 3 3 3 0 COP9 signalosome complex subunit 7a helix I domain Hum_adeno_E3A PF05393.11 ORF118085 - 0.18 11.8 1.0 0.34 10.9 1.0 1.5 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein SR-25 PF10500.9 ORF115737 - 0.019 14.6 4.3 0.026 14.2 4.3 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Alba PF01918.21 ORF111380 - 1.4e-15 56.9 0.1 2e-15 56.4 0.1 1.3 1 0 0 1 1 1 1 Alba CTP_transf_like PF01467.26 ORF109107 - 1.1e-22 80.8 0.0 1.4e-22 80.4 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like Citrate_ly_lig PF08218.11 ORF109107 - 3.1e-06 27.0 0.1 9.3e-06 25.4 0.0 1.8 1 1 2 3 3 3 1 Citrate lyase ligase C-terminal domain DUF3388 PF11868.8 ORF109107 - 0.13 11.6 0.0 0.45 9.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3388) N_BRCA1_IG PF16158.5 ORF104557 - 1.3e-08 35.4 0.0 2.1e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene DUF1126 PF06565.12 ORF10348 - 0.027 14.3 0.3 0.046 13.5 0.3 1.3 1 0 0 1 1 1 0 DUF1126 PH-like domain Lipocalin PF00061.23 ORF10348 - 0.055 13.7 3.3 0.086 13.0 0.7 2.3 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family HSP33 PF01430.19 NODE_33876_length_640_cov_55.928926_g27018_i0reverse_frame_1 - 0.017 14.6 0.8 0.69 9.3 0.1 2.1 1 1 1 2 2 2 0 Hsp33 protein DASH_Duo1 PF08651.10 NODE_33875_length_640_cov_61.039669_g27017_i0forward_frame_1 - 0.019 14.7 0.4 0.27 11.0 0.0 2.2 2 0 0 2 2 2 0 DASH complex subunit Duo1 WW PF00397.26 NODE_33835_length_641_cov_83.714521_g26984_i0forward_frame_1 - 4.3e-05 23.5 6.6 0.00013 21.9 6.6 1.9 1 0 0 1 1 1 1 WW domain Ank_4 PF13637.6 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_1 - 1.9e-42 143.1 4.8 7.4e-10 39.2 0.1 4.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_1 - 2.9e-39 133.5 1.4 4.4e-15 56.0 0.1 3.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_1 - 1.5e-30 104.3 7.7 4.1e-07 30.1 0.0 5.2 5 0 0 5 5 5 5 Ankyrin repeat Ank_5 PF13857.6 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_1 - 1.1e-23 83.0 15.9 1.2e-07 31.8 0.6 5.8 1 1 5 6 6 6 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_1 - 8.5e-22 74.9 0.2 0.0035 17.7 0.0 5.6 6 0 0 6 6 6 4 Ankyrin repeat Maff2 PF12750.7 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_1 - 0.018 14.8 0.2 22 4.9 0.0 3.4 1 1 3 4 4 4 0 Maff2 family Microvir_lysis PF04517.12 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_1 - 0.022 14.7 0.0 66 3.5 0.0 3.4 3 0 0 3 3 3 0 Microvirus lysis protein (E), C terminus DUF4355 PF14265.6 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_1 - 0.028 14.7 0.3 12 6.2 0.0 3.2 1 1 1 3 3 3 0 Domain of unknown function (DUF4355) DUF5336 PF17270.2 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_1 - 0.043 13.4 1.0 7.4 6.2 0.0 2.5 1 1 1 3 3 3 0 Family of unknown function (DUF5336) ABC_tran PF00005.27 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 7.8e-30 104.2 0.0 1.1e-29 103.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 5.1e-07 29.4 1.2 7.4e-05 22.3 0.2 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 3e-05 24.0 0.5 0.071 12.9 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_24 PF13479.6 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.00013 21.8 0.0 0.0002 21.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.00093 19.4 0.2 0.031 14.5 0.2 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.0043 16.8 0.0 0.0062 16.3 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.018 15.5 0.0 0.19 12.2 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.03 14.7 0.0 0.069 13.5 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.044 14.3 4.3 0.15 12.6 4.3 1.9 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.062 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.071 13.0 0.0 0.25 11.2 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase MMR_HSR1 PF01926.23 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.08 13.0 0.2 0.4 10.8 0.2 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_1 - 0.097 11.9 0.0 0.18 11.0 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin TMEM154 PF15102.6 NODE_33790_length_642_cov_6.670511_g26942_i0forward_frame_1 - 0.2 11.6 0.1 0.2 11.6 0.1 2.0 2 0 0 2 2 2 0 TMEM154 protein family Dexa_ind PF15198.6 NODE_33758_length_643_cov_2.703947_g26916_i0reverse_frame_2 - 0.11 12.6 0.1 0.22 11.7 0.1 1.5 1 0 0 1 1 1 0 Dexamethasone-induced DUF3342 PF11822.8 NODE_33758_length_643_cov_2.703947_g26916_i0forward_frame_2 - 0.0096 16.1 1.0 0.021 15.0 0.0 2.1 3 0 0 3 3 3 1 Domain of unknown function (DUF3342) HD_assoc PF13286.6 NODE_33756_length_643_cov_3.108553_g26914_i0reverse_frame_2 - 0.00098 19.6 0.1 0.0059 17.1 0.0 2.3 1 1 2 3 3 3 1 Phosphohydrolase-associated domain ACP53EA PF06313.11 NODE_33753_length_643_cov_6.458882_g26911_i0reverse_frame_3 - 0.0028 17.8 0.7 0.0051 17.0 0.7 1.4 1 0 0 1 1 1 1 Drosophila ACP53EA protein Phospho_p8 PF10195.9 NODE_33753_length_643_cov_6.458882_g26911_i0reverse_frame_3 - 0.026 15.0 0.2 0.067 13.7 0.2 1.7 1 0 0 1 1 1 0 DNA-binding nuclear phosphoprotein p8 PRP21_like_P PF12230.8 NODE_33753_length_643_cov_6.458882_g26911_i0reverse_frame_2 - 0.0059 16.5 1.7 0.009 15.9 1.7 1.2 1 0 0 1 1 1 1 Pre-mRNA splicing factor PRP21 like protein WASH-7_C PF14746.6 NODE_33748_length_643_cov_66.069079_g26906_i0reverse_frame_3 - 0.029 14.1 0.2 0.047 13.4 0.2 1.2 1 0 0 1 1 1 0 WASH complex subunit 7, C-terminal MyTH4 PF00784.17 NODE_33735_length_643_cov_130.432566_g26893_i0reverse_frame_3 - 1.7 9.2 7.1 0.21 12.1 1.9 2.2 1 1 1 2 2 2 0 MyTH4 domain Cyt-b5 PF00173.28 NODE_33709_length_643_cov_3007.261513_g17573_i1forward_frame_3 - 4e-18 65.3 0.0 6.4e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain zinc-ribbons_6 PF07191.12 NODE_33705_length_644_cov_2.098522_g26869_i0forward_frame_2 - 0.02 14.9 0.2 0.048 13.6 0.2 1.6 1 0 0 1 1 1 0 zinc-ribbons ADIP PF11559.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 3.2e-05 24.0 11.2 0.0023 18.0 0.8 3.1 1 1 2 3 3 3 2 Afadin- and alpha -actinin-Binding DUF641 PF04859.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.00013 22.3 4.3 0.12 12.7 1.0 2.7 1 1 2 3 3 2 2 Plant protein of unknown function (DUF641) DUF4201 PF13870.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.00021 21.1 12.2 0.0012 18.6 6.3 2.9 1 1 1 2 2 2 2 Domain of unknown function (DUF4201) TMF_TATA_bd PF12325.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.00088 19.5 7.5 0.047 13.9 2.5 2.8 1 1 1 2 2 2 1 TATA element modulatory factor 1 TATA binding ATG16 PF08614.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0012 19.1 17.6 0.013 15.8 8.1 2.7 1 1 1 2 2 2 2 Autophagy protein 16 (ATG16) Fez1 PF06818.15 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0015 19.0 5.4 0.0015 19.0 5.4 1.9 1 1 1 2 2 2 2 Fez1 GAS PF13851.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.002 17.5 13.3 0.017 14.5 3.9 2.5 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding bZIP_1 PF00170.21 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0022 18.0 7.5 0.87 9.7 0.4 3.6 3 0 0 3 3 3 1 bZIP transcription factor DUF1319 PF07028.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0028 17.9 6.8 0.13 12.4 1.0 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF1319) CALCOCO1 PF07888.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0039 16.1 12.2 0.082 11.8 8.1 2.0 1 1 1 2 2 2 2 Calcium binding and coiled-coil domain (CALCOCO1) like TPR_MLP1_2 PF07926.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0052 16.9 6.4 0.0052 16.9 6.4 2.8 1 1 1 2 2 2 1 TPR/MLP1/MLP2-like protein ABC_tran_CTD PF16326.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0085 16.3 7.8 0.057 13.7 2.1 3.3 1 1 2 3 3 3 1 ABC transporter C-terminal domain BRE1 PF08647.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.0091 16.0 10.0 0.03 14.4 1.9 3.4 1 1 2 3 3 3 1 BRE1 E3 ubiquitin ligase Spc7 PF08317.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.011 14.6 12.7 0.24 10.2 1.3 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein UPF0242 PF06785.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.012 15.8 9.8 0.083 13.0 1.3 2.4 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Golgin_A5 PF09787.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.012 15.1 7.3 0.025 14.1 7.0 1.6 1 1 1 2 2 2 0 Golgin subfamily A member 5 Spc42p PF11544.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.013 15.5 5.2 0.036 14.0 0.4 2.8 1 1 1 2 2 2 0 Spindle pole body component Spc42p FlaC_arch PF05377.11 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.015 15.6 7.4 5.1 7.6 0.1 4.4 3 2 3 6 6 4 0 Flagella accessory protein C (FlaC) Lzipper-MIP1 PF14389.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.018 15.4 9.2 0.037 14.3 0.7 3.8 1 1 3 4 4 4 0 Leucine-zipper of ternary complex factor MIP1 Filament PF00038.21 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.018 14.6 14.8 0.04 13.5 6.9 2.7 1 1 1 2 2 2 0 Intermediate filament protein APG6_N PF17675.1 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.028 15.0 15.3 0.065 13.8 5.6 2.5 1 1 2 3 3 3 0 Apg6 coiled-coil region DUF5082 PF16888.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.032 14.5 2.5 0.55 10.5 0.0 3.1 1 1 1 3 3 3 0 Domain of unknown function (DUF5082) TPD52 PF04201.15 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.033 13.8 2.0 0.54 9.8 0.1 3.0 2 1 1 3 3 2 0 Tumour protein D52 family Atg14 PF10186.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.036 13.2 7.0 0.55 9.3 0.8 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Ax_dynein_light PF10211.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.058 13.3 4.3 1.8 8.5 0.4 2.5 1 1 1 2 2 2 0 Axonemal dynein light chain DUF2968 PF11180.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.069 12.8 8.0 0.031 13.9 3.3 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF2968) Cep57_CLD_2 PF14197.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.075 13.1 1.0 0.075 13.1 1.0 4.2 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 TolA_bind_tri PF16331.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.081 13.0 10.7 1 9.5 0.7 4.2 1 1 4 5 5 5 0 TolA binding protein trimerisation DUF4407 PF14362.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.084 12.2 9.0 0.17 11.2 8.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.087 13.5 8.7 0.07 13.8 3.1 2.9 1 1 1 2 2 2 0 SlyX DivIC PF04977.15 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.1 12.4 13.2 0.4 10.5 0.1 4.0 3 2 2 5 5 4 0 Septum formation initiator DUF2730 PF10805.8 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.11 12.6 5.0 0.82 9.8 0.9 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF2730) DUF724 PF05266.14 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.11 12.4 3.7 4.3 7.1 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) CENP-F_leu_zip PF10473.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.12 12.4 15.0 0.59 10.2 5.4 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CEP63 PF17045.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.15 11.9 10.0 0.72 9.7 8.2 2.2 1 1 1 2 2 2 0 Centrosomal protein of 63 kDa FAM76 PF16046.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.19 11.1 5.7 0.14 11.5 3.7 1.6 1 1 1 2 2 2 0 FAM76 protein DUF4472 PF14739.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.19 12.5 6.9 0.71 10.6 1.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) Macoilin PF09726.9 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.26 9.8 13.2 2 6.9 3.4 2.9 1 1 1 2 2 2 0 Macoilin family DUF16 PF01519.16 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.26 11.8 7.4 4.5 7.8 2.6 2.3 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF1664 PF07889.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.27 11.3 4.1 2.4 8.2 0.5 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) BST2 PF16716.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.33 11.6 7.5 19 5.9 0.1 3.6 2 2 2 4 4 4 0 Bone marrow stromal antigen 2 bZIP_2 PF07716.15 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.34 11.0 7.8 2.6 8.2 0.1 3.5 3 0 0 3 3 3 0 Basic region leucine zipper AAA_13 PF13166.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.41 9.2 7.1 1.5 7.4 6.6 1.7 1 1 1 2 2 2 0 AAA domain PRKG1_interact PF15898.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.49 11.3 10.1 0.68 10.9 2.7 3.1 1 1 2 3 3 3 0 cGMP-dependent protein kinase interacting domain EMP24_GP25L PF01105.24 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.54 10.2 2.6 0.35 10.8 0.7 1.8 2 1 0 2 2 1 0 emp24/gp25L/p24 family/GOLD TMCO5 PF14992.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.61 9.6 10.2 0.26 10.8 5.5 2.1 1 1 1 2 2 2 0 TMCO5 family YabA PF06156.13 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.7 10.6 5.7 1.1 10.0 0.3 2.9 1 1 2 3 3 3 0 Initiation control protein YabA Rnk_N PF14760.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.71 10.4 6.4 1.2 9.7 0.5 3.4 2 1 0 2 2 2 0 Rnk N-terminus Laminin_II PF06009.12 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 0.8 9.7 9.2 0.32 11.0 2.0 2.3 1 1 0 2 2 2 0 Laminin Domain II PI3K_P85_iSH2 PF16454.5 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 1.1 8.8 8.4 1 8.9 1.0 2.6 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain HAUS-augmin3 PF14932.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 4 6.9 9.6 0.76 9.3 3.5 2.0 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Ead_Ea22 PF13935.6 NODE_33704_length_644_cov_2.413793_g26868_i0forward_frame_3 - 6.2 7.5 10.1 1.1e+02 3.5 10.1 2.4 1 1 0 1 1 1 0 Ead/Ea22-like protein AKAP7_RIRII_bdg PF10470.9 NODE_33699_length_644_cov_3.459770_g26863_i0reverse_frame_3 - 0.27 11.3 0.8 0.64 10.1 0.1 1.9 2 0 0 2 2 2 0 PKA-RI-RII subunit binding domain of A-kinase anchor protein RCC1_2 PF13540.6 NODE_33686_length_644_cov_98.699507_g26850_i0forward_frame_3 - 9.5e-14 50.8 4.7 0.15 11.9 0.0 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_33686_length_644_cov_98.699507_g26850_i0forward_frame_3 - 0.00015 21.9 3.6 12 5.9 0.0 4.8 3 2 2 5 5 5 2 Uncharacterised ACR, YagE family COG1723 Lipocalin_7 PF14651.6 NODE_33686_length_644_cov_98.699507_g26850_i0forward_frame_3 - 0.00083 19.3 2.2 4.8 7.1 0.1 3.1 1 1 2 3 3 3 3 Lipocalin / cytosolic fatty-acid binding protein family PH_TFIIH PF08567.11 NODE_33686_length_644_cov_98.699507_g26850_i0forward_frame_3 - 0.021 15.1 0.5 14 6.1 0.0 3.6 2 1 2 4 4 4 0 TFIIH p62 subunit, N-terminal domain MRP-S35 PF10246.9 NODE_33686_length_644_cov_98.699507_g26850_i0forward_frame_3 - 0.16 11.9 0.0 18 5.4 0.0 2.4 2 0 0 2 2 2 0 Mitochondrial ribosomal protein MRP-S35 NPV_P10 PF05531.12 NODE_33686_length_644_cov_98.699507_g26850_i0forward_frame_3 - 0.3 11.6 2.5 34 5.0 0.0 3.5 4 0 0 4 4 4 0 Nucleopolyhedrovirus P10 protein LZ_Tnp_IS481 PF13011.6 NODE_33671_length_644_cov_227.440066_g26836_i0forward_frame_3 - 0.083 13.4 0.9 0.24 12.0 0.1 2.1 2 0 0 2 2 2 0 leucine-zipper of insertion element IS481 COX8 PF02285.15 NODE_33665_length_644_cov_728.334975_g26830_i0forward_frame_3 - 0.9 9.5 42.3 5.9 6.8 0.4 9.0 5 2 2 8 8 8 0 Cytochrome oxidase c subunit VIII DUF3340 PF11818.8 NODE_33655_length_645_cov_3.075410_g26821_i0reverse_frame_2 - 6.2e-41 140.1 5.4 7.8e-41 139.8 5.4 1.1 1 0 0 1 1 1 1 C-terminal domain of tail specific protease (DUF3340) Peptidase_S41 PF03572.18 NODE_33655_length_645_cov_3.075410_g26821_i0reverse_frame_2 - 4.6e-13 49.1 0.3 8.5e-13 48.2 0.1 1.6 2 0 0 2 2 2 1 Peptidase family S41 DUF5517 PF17639.2 NODE_33651_length_645_cov_31.262295_g26817_i0forward_frame_2 - 0.074 13.4 0.1 0.16 12.3 0.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5517) GlpM PF06942.12 NODE_33651_length_645_cov_31.262295_g26817_i0forward_frame_2 - 2.2 8.8 8.2 0.51 10.8 0.8 2.8 2 2 0 2 2 2 0 GlpM protein TMEM132D_C PF15706.5 NODE_33651_length_645_cov_31.262295_g26817_i0forward_frame_2 - 2.4 8.0 4.6 2.1 8.2 0.9 2.3 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term COG5 PF10392.9 NODE_33648_length_645_cov_53.360656_g26814_i0forward_frame_3 - 0.0072 16.5 1.1 0.087 13.0 1.5 2.1 1 1 1 2 2 2 1 Golgi transport complex subunit 5 Spc7 PF08317.11 NODE_33648_length_645_cov_53.360656_g26814_i0forward_frame_3 - 0.025 13.4 5.8 0.035 13.0 5.8 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 NODE_33648_length_645_cov_53.360656_g26814_i0forward_frame_3 - 0.5 9.9 4.6 0.54 9.8 4.6 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Metallophos PF00149.28 NODE_33638_length_645_cov_104.109836_g26805_i0forward_frame_3 - 2.7e-09 37.8 0.1 4.5e-09 37.1 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PPR_2 PF13041.6 NODE_33636_length_645_cov_121.711475_g26803_i0forward_frame_3 - 1.4e-06 28.4 0.0 0.27 11.4 0.0 4.0 2 1 2 4 4 4 3 PPR repeat family DUF848 PF05852.11 NODE_33633_length_645_cov_155.090164_g24257_i1forward_frame_3 - 0.001 19.2 6.2 0.27 11.4 3.9 2.7 1 1 1 2 2 2 2 Gammaherpesvirus protein of unknown function (DUF848) Nudix_N PF12535.8 NODE_33633_length_645_cov_155.090164_g24257_i1forward_frame_3 - 0.13 11.9 0.4 0.39 10.3 0.1 1.9 2 0 0 2 2 2 0 Hydrolase of X-linked nucleoside diphosphate N terminal TFIIA_gamma_N PF02268.16 NODE_33613_length_645_cov_1367.760656_g26782_i0forward_frame_3 - 1.4e-07 31.4 0.0 2.8e-07 30.4 0.0 1.5 1 0 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit, helical domain adh_short PF00106.25 ORF96272 - 1.7e-20 73.3 0.7 1.9e-20 73.1 0.7 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF96272 - 6.3e-13 48.8 0.2 7.9e-13 48.5 0.2 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF5027 PF16430.5 ORF96272 - 0.003 17.4 0.1 0.004 16.9 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5027) NmrA PF05368.13 ORF96272 - 0.023 14.3 0.4 0.03 13.9 0.4 1.2 1 0 0 1 1 1 0 NmrA-like family Snf7 PF03357.21 ORF95335 - 4.7e-31 107.7 22.4 6e-31 107.4 22.4 1.1 1 0 0 1 1 1 1 Snf7 Ppx-GppA PF02541.16 ORF95335 - 0.056 12.9 1.2 0.092 12.2 0.7 1.6 1 1 0 1 1 1 0 Ppx/GppA phosphatase family Phosphatase PF15698.5 ORF95335 - 0.11 11.6 1.1 0.16 11.1 1.1 1.3 1 0 0 1 1 1 0 Phosphatase CCDC-167 PF15188.6 ORF95335 - 0.12 12.7 0.5 0.12 12.7 0.5 2.6 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 TMCCDC2 PF15844.5 ORF95335 - 0.25 11.2 3.3 0.41 10.5 3.3 1.3 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 Nup54 PF13874.6 ORF95335 - 0.36 10.9 7.1 1.7 8.8 7.1 2.1 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 Atg14 PF10186.9 ORF95335 - 0.37 9.8 5.3 0.54 9.3 5.3 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cauli_DNA-bind PF03310.13 ORF95335 - 1.6 8.8 8.6 0.94 9.6 2.9 2.2 2 0 0 2 2 2 0 Caulimovirus DNA-binding protein NPV_P10 PF05531.12 ORF95335 - 1.7 9.1 6.8 3.2 8.3 3.1 2.9 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF1987 PF09345.10 ORF95335 - 5.2 6.8 10.8 0.11 12.2 4.0 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF1987) DoxA PF07680.11 ORF95069 - 0.64 9.9 5.0 0.39 10.6 0.8 2.5 3 0 0 3 3 3 0 TQO small subunit DoxA Perilipin PF03036.16 ORF9503 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family GST_C PF00043.25 ORF9391 - 1.6e-09 37.8 0.1 3e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF9391 - 1.3e-08 35.2 0.0 2.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF9391 - 5e-08 33.2 0.0 8.5e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF9391 - 7e-07 29.4 0.1 1.8e-06 28.1 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF9391 - 0.00034 20.6 0.0 0.0007 19.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF9391 - 0.16 12.3 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain zf-C2H2_3 PF13878.6 ORF92588 - 0.073 12.9 2.0 1.4 8.8 0.1 2.7 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO TTL PF03133.15 ORF91773 - 1.5e-33 116.2 0.8 4.6e-33 114.6 0.8 1.6 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF91773 - 0.0059 15.9 0.0 0.0092 15.3 0.0 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp Totivirus_coat PF05518.11 ORF89772 - 7.2 4.5 8.7 8.6 4.3 8.7 1.1 1 0 0 1 1 1 0 Totivirus coat protein HECT PF00632.25 ORF8613 - 4.9e-15 55.8 0.0 6.1e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Phage_ABA_S PF18066.1 ORF8613 - 0.16 12.7 3.2 1.9 9.2 0.5 2.3 2 0 0 2 2 2 0 Phage ABA sandwich domain LysE PF01810.18 ORF8446 - 7.8e-51 172.3 14.0 9.1e-51 172.1 14.0 1.0 1 0 0 1 1 1 1 LysE type translocator GHMP_kinases_N PF00288.26 ORF84166 - 0.068 13.4 0.1 6.5 7.1 0.0 2.4 2 0 0 2 2 2 0 GHMP kinases N terminal domain SNCAIP_SNCA_bd PF16700.5 ORF82758 - 1.6 8.5 3.8 1.5 8.6 2.0 1.8 2 0 0 2 2 2 0 Synphilin-1 alpha-Synuclein-binding domain C6_DPF PF10170.9 ORF77813 - 0.25 11.7 3.1 0.54 10.7 0.1 2.4 2 0 0 2 2 2 0 Cysteine-rich domain Halogen_Hydrol PF10112.9 ORF7736 - 0.032 14.3 1.9 0.071 13.1 1.9 1.5 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PilN PF05137.13 ORF7736 - 0.064 13.4 0.3 0.13 12.4 0.1 1.7 2 0 0 2 2 2 0 Fimbrial assembly protein (PilN) CHD5 PF04420.14 ORF7736 - 1 9.2 6.9 0.4 10.5 2.7 2.1 1 1 1 2 2 2 0 CHD5-like protein Na_Ca_ex PF01699.24 ORF76573 - 1.1e-21 77.4 15.5 1.3e-21 77.1 15.5 1.1 1 0 0 1 1 1 1 Sodium/calcium exchanger protein DUF2304 PF10066.9 ORF76573 - 0.057 13.6 0.1 0.057 13.6 0.1 2.8 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) COX2-transmemb PF09125.10 ORF76573 - 0.23 11.3 0.2 0.23 11.3 0.2 2.6 3 0 0 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane DUF3810 PF12725.7 ORF76573 - 4.8 6.4 8.2 0.39 10.0 1.8 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3810) DUF2107 PF09880.9 ORF75242 - 0.1 12.8 0.5 0.18 12.0 0.5 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2107) DUF4081 PF13312.6 ORF74828 - 0.0065 16.6 0.1 0.01 16.0 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4081) Na_Ca_ex PF01699.24 ORF74526 - 5.4e-25 88.1 13.8 7.1e-25 87.7 13.8 1.1 1 0 0 1 1 1 1 Sodium/calcium exchanger protein 2TM PF13239.6 ORF74526 - 0.033 14.5 4.0 0.033 14.5 4.0 2.4 2 0 0 2 2 2 0 2TM domain TIC20 PF16166.5 ORF74526 - 0.081 12.7 3.9 0.12 12.2 0.5 2.0 2 0 0 2 2 2 0 Chloroplast import apparatus Tic20-like Epiglycanin_C PF14654.6 ORF74526 - 0.21 11.6 1.4 0.25 11.4 0.2 1.9 2 0 0 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region SHMT PF00464.19 ORF73678 - 1.2e-47 162.5 0.0 1.5e-47 162.1 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase P3A PF08727.11 ORF73678 - 0.011 15.1 0.1 0.048 13.1 0.0 2.0 2 0 0 2 2 2 0 Poliovirus 3A protein like AAA_lid_3 PF17862.1 ORF73678 - 0.015 15.1 0.0 0.031 14.1 0.0 1.6 1 0 0 1 1 1 0 AAA+ lid domain Trns_repr_metal PF02583.17 ORF73678 - 0.05 14.0 0.0 0.086 13.2 0.0 1.3 1 0 0 1 1 1 0 Metal-sensitive transcriptional repressor LDcluster4 PF18306.1 ORF73678 - 0.056 13.0 0.0 0.13 11.9 0.0 1.5 1 0 0 1 1 1 0 SLOG cluster4 family HECT PF00632.25 ORF72605 - 3.9e-16 59.4 0.0 4.8e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Pox_Ag35 PF03286.14 ORF72605 - 0.092 12.5 2.4 0.13 12.0 2.4 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein AsnC_trans_reg2 PF17805.1 ORF72605 - 0.15 12.2 0.3 0.28 11.4 0.1 1.5 2 0 0 2 2 2 0 AsnC-like ligand binding domain RRM_1 PF00076.22 ORF72045 - 3e-10 39.8 0.0 4.4e-10 39.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF72045 - 0.14 12.3 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif DUF3395 PF11875.8 ORF70893 - 1.5e-26 93.1 0.0 2e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3395) Perilipin PF03036.16 ORF68420 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family TMEM132D_C PF15706.5 ORF64375 - 0.82 9.5 6.4 2.6 7.9 0.5 2.7 3 0 0 3 3 3 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term PRMT5_C PF17286.2 ORF61740 - 3.2e-44 150.9 0.0 4e-44 150.6 0.0 1.0 1 0 0 1 1 1 1 PRMT5 oligomerisation domain PRMT5 PF05185.16 ORF61740 - 5.6e-18 65.4 0.0 7.4e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase WGG PF10273.9 ORF59442 - 3e-18 66.2 0.0 6e-18 65.3 0.0 1.5 1 0 0 1 1 1 1 Pre-rRNA-processing protein TSR2 GvpG PF05120.12 ORF59442 - 0.045 13.8 0.6 0.093 12.7 0.6 1.6 1 0 0 1 1 1 0 Gas vesicle protein G RRP7 PF12923.7 ORF59442 - 0.082 13.0 0.6 0.15 12.2 0.1 1.8 1 1 1 2 2 2 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain HHH_9 PF17674.1 ORF58240 - 0.68 10.9 4.5 2.6 9.0 0.0 2.7 3 0 0 3 3 3 0 HHH domain Perilipin PF03036.16 ORF58009 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family Peptidase_M74 PF03411.13 ORF5640 - 7.3e-82 274.5 0.0 8.1e-82 274.4 0.0 1.0 1 0 0 1 1 1 1 Penicillin-insensitive murein endopeptidase KGK PF08872.10 ORF53746 - 0.025 15.1 0.2 0.21 12.1 0.0 2.3 2 0 0 2 2 2 0 KGK domain Thionin PF00321.17 ORF52145 - 3.8 8.1 10.8 1.1 9.7 0.2 2.7 3 0 0 3 3 3 0 Plant thionin PolC_DP2 PF03833.13 ORF52125 - 8.3 4.1 5.6 10 3.9 5.6 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 C1_1 PF00130.22 ORF51676 - 0.0077 16.1 5.1 0.014 15.3 5.1 1.5 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) BLOC1_2 PF10046.9 ORF51676 - 0.046 14.0 0.2 0.046 14.0 0.2 2.1 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 zf-B_box PF00643.24 ORF51676 - 0.077 13.2 3.4 0.14 12.4 3.4 1.4 1 0 0 1 1 1 0 B-box zinc finger zf-CCHC_5 PF14787.6 ORF51676 - 0.62 9.8 4.4 1.5 8.6 4.4 1.6 1 0 0 1 1 1 0 GAG-polyprotein viral zinc-finger PHD PF00628.29 ORF51676 - 0.7 9.8 6.9 1.6 8.7 6.9 1.8 1 1 0 1 1 1 0 PHD-finger LEAP-2 PF07359.11 ORF50119 - 3.9 7.4 12.5 0.36 10.7 0.7 2.9 3 0 0 3 3 3 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) EF-hand_4 PF12763.7 ORF49016 - 0.015 15.3 0.2 0.034 14.1 0.2 1.7 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EF-hand_1 PF00036.32 ORF49016 - 0.038 13.6 1.4 0.49 10.1 0.3 3.0 2 0 0 2 2 2 0 EF hand EF-hand_7 PF13499.6 ORF49016 - 0.56 10.7 7.3 9.3 6.8 7.3 2.7 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF49016 - 2.6 8.2 5.9 0.62 10.2 0.4 2.9 4 0 0 4 4 4 0 EF-hand domain DUF2951 PF11166.8 ORF48446 - 0.01 16.1 0.4 0.01 16.1 0.4 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2951) DUF3151 PF11349.8 ORF48396 - 0.068 13.3 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3151) GST_C PF00043.25 ORF47165 - 1.2e-08 35.0 0.2 3.1e-08 33.7 0.1 1.7 1 1 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF47165 - 2.6e-07 30.6 0.1 4.4e-07 29.8 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF47165 - 1.6e-06 28.4 0.0 6.6e-06 26.5 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF47165 - 5.3e-06 26.5 0.1 1e-05 25.7 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF47165 - 2.6e-05 24.5 0.0 4.5e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain CLAG PF03805.13 ORF47165 - 0.011 13.4 0.0 0.013 13.1 0.0 1.0 1 0 0 1 1 1 0 Cytoadherence-linked asexual protein GST_N_2 PF13409.6 ORF47165 - 0.087 13.1 0.0 0.16 12.3 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain SNARE_assoc PF09335.11 ORF46689 - 1.1e-22 80.8 4.8 2.3e-20 73.3 6.6 2.0 2 0 0 2 2 2 1 SNARE associated Golgi protein Connexin PF00029.19 ORF46689 - 0.0024 17.7 1.1 0.0037 17.1 1.1 1.2 1 0 0 1 1 1 1 Connexin G0-G1_switch_2 PF15103.6 ORF46689 - 0.0095 16.4 1.0 0.025 15.0 1.0 1.7 1 0 0 1 1 1 1 G0/G1 switch protein 2 DUF3169 PF11368.8 ORF46689 - 0.0098 15.4 1.9 0.035 13.6 0.2 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3169) Nucleoside_tran PF01733.18 ORF46689 - 0.012 15.0 0.3 0.021 14.2 0.3 1.4 1 0 0 1 1 1 0 Nucleoside transporter Serinc PF03348.15 ORF46689 - 0.015 14.2 0.3 0.015 14.2 0.3 1.5 2 0 0 2 2 2 0 Serine incorporator (Serinc) FAM176 PF14851.6 ORF46689 - 0.02 14.6 1.1 0.031 14.0 1.1 1.2 1 0 0 1 1 1 0 FAM176 family DUF4834 PF16118.5 ORF46689 - 0.02 15.9 0.4 0.02 15.9 0.4 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Orthopox_A36R PF05950.11 ORF46689 - 0.023 14.8 0.0 0.044 13.9 0.0 1.5 1 0 0 1 1 1 0 Orthopoxvirus A36R protein V_ATPase_I PF01496.19 ORF46689 - 0.026 12.4 0.6 0.035 12.1 0.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4407 PF14362.6 ORF46689 - 0.029 13.7 0.3 0.029 13.7 0.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) Ureide_permease PF07168.11 ORF46689 - 0.031 13.0 0.1 0.043 12.6 0.1 1.2 1 0 0 1 1 1 0 Ureide permease Presenilin PF01080.17 ORF46689 - 0.15 10.8 1.6 0.26 10.0 1.6 1.4 1 0 0 1 1 1 0 Presenilin DUF3139 PF11337.8 ORF46689 - 0.15 12.7 0.3 5.9 7.6 0.0 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3139) OATP PF03137.20 ORF46689 - 0.16 10.2 0.1 0.16 10.2 0.1 1.7 3 0 0 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family Acatn PF13000.7 ORF46689 - 0.22 10.0 2.2 0.18 10.3 0.1 1.7 2 0 0 2 2 2 0 Acetyl-coenzyme A transporter 1 EIIBC-GUT_N PF03612.14 ORF46689 - 0.34 10.6 6.1 0.54 10.0 6.1 1.2 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus SID-1_RNA_chan PF13965.6 ORF46689 - 0.36 9.2 6.5 0.069 11.6 1.2 1.9 1 1 1 2 2 2 0 dsRNA-gated channel SID-1 TFB6 PF17110.5 ORF46689 - 0.57 9.9 6.0 1 9.1 6.0 1.3 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF2681 PF10883.8 ORF46689 - 2.7 8.5 12.7 1.1 9.8 8.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2681) SHR3_chaperone PF08229.11 ORF46689 - 4 6.4 7.0 0.33 9.9 1.9 1.9 1 1 1 2 2 2 0 ER membrane protein SH3 CiPC PF15800.5 ORF42974 - 0.041 13.6 2.2 0.051 13.3 2.2 1.1 1 0 0 1 1 1 0 Clock interacting protein circadian GST_C PF00043.25 ORF42608 - 3.3e-09 36.9 0.1 6e-09 36.0 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF42608 - 3.4e-08 33.8 0.0 6.6e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF42608 - 4.9e-07 29.9 0.1 1.3e-06 28.6 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF42608 - 7.1e-07 29.5 0.0 1.2e-06 28.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF42608 - 0.00072 19.5 0.0 0.0017 18.3 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin2_C PF04399.13 ORF42608 - 0.12 12.2 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain CLAMP PF14769.6 ORF40338 - 7.2e-16 58.4 0.0 1.1e-15 57.9 0.0 1.3 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 Perilipin PF03036.16 ORF37250 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family Antimicrobial12 PF08107.11 ORF37143 - 0.069 12.9 0.4 0.11 12.2 0.4 1.3 1 0 0 1 1 1 0 Pleurocidin family CUE PF02845.16 ORF34901 - 8.5e-13 47.7 0.2 1.7e-12 46.8 0.2 1.5 1 0 0 1 1 1 1 CUE domain PAXIP1_C PF15364.6 ORF34901 - 0.56 10.5 9.7 0.62 10.4 8.4 1.7 1 1 0 1 1 1 0 PAXIP1-associated-protein-1 C term PTIP binding protein GET2 PF08690.10 ORF34901 - 3 7.4 14.6 3.9 7.1 14.6 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 Perilipin PF03036.16 ORF32840 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family ABC_tran PF00005.27 ORF31373 - 1.3e-15 58.1 0.0 1.9e-15 57.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF31373 - 6.9e-09 35.9 0.0 8.5e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 ORF31373 - 0.0075 16.0 0.0 0.013 15.3 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 ORF31373 - 0.029 13.8 0.0 0.036 13.5 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF31373 - 0.082 13.2 0.0 0.36 11.1 0.0 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit 3Beta_HSD PF01073.19 ORF30443 - 6.7e-16 58.1 0.0 7.9e-16 57.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF30443 - 1.2e-11 44.6 0.1 2.6e-11 43.5 0.1 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF30443 - 3.1e-05 23.3 0.0 3.8e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF30443 - 3.4e-05 23.1 0.2 0.00031 20.0 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF30443 - 0.00023 21.1 0.0 0.00083 19.3 0.0 1.7 2 0 0 2 2 2 1 NAD(P)H-binding Desulfoferrod_N PF06397.12 ORF29004 - 0.077 12.6 0.9 0.15 11.7 0.9 1.4 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain Perilipin PF03036.16 ORF27150 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family ArsP_1 PF03773.13 ORF2534 - 0.095 11.8 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 Predicted permease 5_3_exonuc PF01367.20 ORF24729 - 2.9e-26 91.9 0.0 4.2e-26 91.4 0.0 1.2 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold 5_3_exonuc_N PF02739.16 ORF24729 - 1.6e-25 89.9 0.0 2.2e-25 89.4 0.0 1.2 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain B_lectin PF01453.24 ORF24259 - 0.017 15.6 0.0 0.17 12.4 0.0 2.0 1 1 1 2 2 2 0 D-mannose binding lectin zf-C4H2 PF10146.9 ORF24259 - 2.6 8.3 5.4 3.4 7.9 5.4 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein Sulfatase PF00884.23 ORF24173 - 2.6e-05 23.8 0.1 4.5e-05 23.0 0.1 1.5 1 1 0 1 1 1 1 Sulfatase MFS_1 PF07690.16 ORF23004 - 0.25 10.2 19.0 0.26 10.2 10.2 2.0 1 1 0 2 2 2 0 Major Facilitator Superfamily Glyco_hydro_17 PF00332.18 ORF21852 - 0.014 15.0 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 17 Perilipin PF03036.16 ORF20596 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family CUE PF02845.16 ORF19544 - 8.4e-13 47.8 0.2 1.7e-12 46.8 0.2 1.5 1 0 0 1 1 1 1 CUE domain PAXIP1_C PF15364.6 ORF19544 - 0.54 10.6 9.7 0.47 10.8 8.0 1.7 1 1 0 1 1 1 0 PAXIP1-associated-protein-1 C term PTIP binding protein GET2 PF08690.10 ORF19544 - 3.1 7.4 14.6 4 7.0 14.6 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 Ribosomal_L1 PF00687.21 ORF17904 - 5.5e-40 137.3 4.1 6.8e-40 137.0 4.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Helicase_C PF00271.31 ORF17904 - 0.068 13.5 0.0 0.19 12.0 0.0 1.8 1 1 0 1 1 1 0 Helicase conserved C-terminal domain Ribosomal_L32p PF01783.23 ORF16088 - 0.39 11.0 10.2 0.48 10.7 7.9 2.1 2 0 0 2 2 2 0 Ribosomal L32p protein family Perilipin PF03036.16 ORF147766 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family DUF1133 PF06576.11 ORF145586 - 0.017 14.5 0.1 0.024 14.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1133) zf-H2C2_2 PF13465.6 ORF14371 - 1.1e-06 28.7 0.5 1.1e-06 28.7 0.5 3.3 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF14371 - 2.3e-06 27.7 12.5 0.002 18.5 4.7 2.7 2 0 0 2 2 2 2 Zinc finger, C2H2 type GAGA PF09237.11 ORF14371 - 0.0047 16.7 0.4 0.01 15.7 0.4 1.6 1 0 0 1 1 1 1 GAGA factor zf-C2H2_4 PF13894.6 ORF14371 - 0.0092 16.7 14.0 0.031 15.1 4.2 3.2 3 0 0 3 3 3 2 C2H2-type zinc finger ADH_N PF08240.12 ORF14371 - 0.058 13.3 0.2 0.13 12.1 0.2 1.6 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain zf-C2H2_8 PF15909.5 ORF14371 - 0.069 13.5 6.5 0.04 14.2 4.0 1.9 2 0 0 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_6 PF13912.6 ORF14371 - 0.29 11.2 8.0 6.7 6.8 4.8 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger C1_4 PF07975.12 ORF14371 - 1.9 8.8 6.6 2.3 8.5 2.5 2.7 2 0 0 2 2 2 0 TFIIH C1-like domain zf-met PF12874.7 ORF14371 - 3.6 8.1 10.3 0.33 11.4 2.1 3.2 2 1 1 3 3 3 0 Zinc-finger of C2H2 type GST_C PF00043.25 ORF140147 - 1.6e-09 37.9 0.1 3e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF140147 - 1.3e-08 35.2 0.0 2.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF140147 - 5e-08 33.2 0.0 8.5e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF140147 - 7e-07 29.4 0.1 1.8e-06 28.1 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF140147 - 0.00034 20.6 0.0 0.0007 19.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF140147 - 0.16 12.3 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Perilipin PF03036.16 ORF139432 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family Sec63 PF02889.16 ORF138197 - 1.3e-24 86.8 0.1 1.4e-24 86.6 0.1 1.0 1 0 0 1 1 1 1 Sec63 Brl domain ASH PF15780.5 ORF138197 - 0.049 13.8 0.0 0.084 13.1 0.0 1.3 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin VWA PF00092.28 ORF135361 - 4.4e-05 23.8 0.8 0.0001 22.6 0.5 1.8 1 1 1 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF135361 - 0.00065 20.3 0.0 0.0012 19.4 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain Ras PF00071.22 ORF134485 - 7.6e-58 194.7 1.0 9.8e-58 194.3 1.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF134485 - 9.5e-35 119.4 0.4 2e-34 118.4 0.4 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF134485 - 3.1e-22 78.8 0.2 4.4e-22 78.4 0.2 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF134485 - 2.7e-09 37.1 0.1 4.5e-09 36.4 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF134485 - 3.3e-08 33.3 0.8 7.5e-08 32.1 0.3 1.8 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF134485 - 3.5e-08 33.1 0.2 4.4e-08 32.8 0.2 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region FeoB_N PF02421.18 ORF134485 - 3.2e-07 30.0 0.1 0.0029 17.2 0.0 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B SRPRB PF09439.10 ORF134485 - 7e-07 28.9 0.1 1.1e-06 28.2 0.1 1.3 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 ORF134485 - 2.7e-06 27.4 1.5 0.0017 18.3 0.1 2.3 1 1 0 2 2 2 2 RsgA GTPase MMR_HSR1_Xtn PF16897.5 ORF134485 - 0.0013 18.7 1.0 0.0022 18.0 0.6 1.6 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain TniB PF05621.11 ORF134485 - 0.018 14.5 0.0 0.036 13.5 0.0 1.5 2 0 0 2 2 2 0 Bacterial TniB protein Dynamin_N PF00350.23 ORF134485 - 0.03 14.4 1.8 4.3 7.4 0.5 2.4 1 1 1 2 2 2 0 Dynamin family SNF2_N PF00176.23 ORF134485 - 0.037 12.7 0.0 0.046 12.4 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain zf-PARP PF00645.18 ORF133482 - 3e-10 40.8 0.8 1.2e-07 32.4 0.2 2.6 1 1 1 2 2 2 2 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks106.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks106.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks106.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks106.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:02:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- BPD_transp_1 PF00528.22 ORF132107 - 2.1e-18 66.7 18.6 2.1e-18 66.7 18.6 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component EF-hand_6 PF13405.6 ORF131332 - 5.5e-07 29.0 0.3 0.049 13.6 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF131332 - 0.00017 22.0 0.1 0.00048 20.5 0.1 1.8 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF131332 - 0.00061 19.2 0.2 0.11 12.1 0.1 2.7 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF131332 - 0.015 14.8 3.2 1.6 8.4 0.4 3.2 3 0 0 3 3 3 0 EF hand Wtap PF17098.5 ORF131332 - 0.017 15.0 0.4 0.042 13.8 0.1 1.6 2 0 0 2 2 2 0 WTAP/Mum2p family EF-hand_8 PF13833.6 ORF131332 - 0.038 13.8 0.1 6.4 6.7 0.1 2.4 2 0 0 2 2 2 0 EF-hand domain pair Perilipin PF03036.16 ORF129618 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family NACHT PF05729.12 ORF128067 - 0.077 12.9 0.0 0.2 11.6 0.0 1.7 1 0 0 1 1 1 0 NACHT domain GST_C PF00043.25 ORF128025 - 1.6e-09 37.8 0.1 3e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF128025 - 1.3e-08 35.2 0.0 2.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF128025 - 5e-08 33.2 0.0 8.5e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF128025 - 7.3e-07 29.3 0.1 1.8e-06 28.1 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF128025 - 0.00037 20.5 0.0 0.0007 19.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF128025 - 0.16 12.3 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Pkinase_Tyr PF07714.17 ORF126996 - 2.3e-51 174.6 0.0 2.5e-51 174.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF126996 - 3.5e-45 154.4 0.0 4.2e-45 154.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Haspin_kinase PF12330.8 ORF126996 - 0.025 13.6 0.0 0.031 13.2 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF126996 - 0.031 13.1 0.0 0.041 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase IL10 PF00726.17 ORF122210 - 0.025 14.1 0.0 0.04 13.4 0.0 1.4 1 1 0 1 1 1 0 Interleukin 10 AP2 PF00847.20 ORF117106 - 6e-06 26.4 3.7 6e-06 26.4 3.7 1.8 2 0 0 2 2 2 1 AP2 domain FAM181 PF15238.6 ORF117106 - 0.08 12.8 6.0 0.13 12.1 6.0 1.2 1 0 0 1 1 1 0 FAM181 DNA_methylase PF00145.17 ORF113686 - 4.5e-06 26.3 0.0 0.00041 19.8 0.0 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase PBS_linker_poly PF00427.21 ORF113686 - 0.0052 16.8 0.0 0.017 15.1 0.0 1.7 2 0 0 2 2 2 1 Phycobilisome Linker polypeptide PSD2 PF07624.11 ORF113686 - 0.038 13.7 0.2 0.061 13.1 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1585) DUF4327 PF14217.6 ORF113686 - 0.16 12.1 0.0 0.29 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4327) Spc7 PF08317.11 ORF112564 - 0.0034 16.3 33.6 0.013 14.4 14.6 2.7 1 1 2 3 3 3 2 Spc7 kinetochore protein Sec8_exocyst PF04048.14 ORF112564 - 0.035 14.0 18.2 0.26 11.2 2.2 3.3 2 1 0 3 3 3 0 Sec8 exocyst complex component specific domain GAS PF13851.6 ORF112564 - 0.1 12.0 33.1 0.85 8.9 14.0 2.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF745 PF05335.13 ORF112564 - 0.22 11.2 30.1 4 7.1 10.7 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Laminin_I PF06008.14 ORF112564 - 0.29 10.8 21.9 0.83 9.3 22.0 1.7 1 1 0 1 1 1 0 Laminin Domain I SlyX PF04102.12 ORF112564 - 0.43 11.2 11.5 1.4 9.6 1.9 3.8 3 2 0 3 3 3 0 SlyX TPR_MLP1_2 PF07926.12 ORF112564 - 0.84 9.7 34.7 0.83 9.7 16.9 3.1 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Laminin_II PF06009.12 ORF112564 - 0.9 9.5 20.3 4.1 7.4 4.1 2.9 1 1 2 3 3 3 0 Laminin Domain II HTH_19 PF12844.7 ORF112564 - 1.1 9.3 6.9 1.4 9.0 0.3 3.1 3 1 0 3 3 3 0 Helix-turn-helix domain DUF1664 PF07889.12 ORF112564 - 1.2 9.1 15.5 3.7 7.6 1.2 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Uds1 PF15456.6 ORF112564 - 1.5 9.0 28.3 0.59 10.3 20.4 2.4 1 1 1 2 2 2 0 Up-regulated During Septation USP8_interact PF08941.10 ORF112564 - 1.5 8.6 15.1 0.6 9.9 2.8 2.6 2 1 1 3 3 3 0 USP8 interacting SH3BP5 PF05276.14 ORF112564 - 1.9 8.2 26.5 0.56 10.0 11.6 2.3 1 1 1 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) She9_MDM33 PF05546.11 ORF112564 - 1.9 8.3 21.2 4.9 6.9 3.2 3.0 1 1 1 2 2 2 0 She9 / Mdm33 family DUF5082 PF16888.5 ORF112564 - 2.2 8.6 22.5 0.39 11.0 0.3 3.5 2 1 2 4 4 4 0 Domain of unknown function (DUF5082) UPF0242 PF06785.11 ORF112564 - 2.5 8.1 26.8 2.7 8.0 11.0 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF812 PF05667.11 ORF112564 - 2.7 6.8 29.3 0.51 9.2 7.1 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF812) CALCOCO1 PF07888.11 ORF112564 - 2.9 6.7 27.5 3.8 6.3 27.5 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like TMF_DNA_bd PF12329.8 ORF112564 - 3.5 7.7 31.8 0.56 10.2 6.8 3.5 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 ORF112564 - 4 7.8 5.8 7.2 6.9 0.6 3.1 2 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) MscS_porin PF12795.7 ORF112564 - 4 6.9 27.5 21 4.6 8.7 3.0 1 1 2 3 3 3 0 Mechanosensitive ion channel porin domain OmpH PF03938.14 ORF112564 - 4.7 7.6 38.7 0.33 11.3 16.9 2.8 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) ATG16 PF08614.11 ORF112564 - 4.7 7.4 29.7 8.4 6.6 8.1 2.3 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Phage_GP20 PF06810.11 ORF112564 - 5.1 6.9 31.3 17 5.2 14.7 2.7 1 1 1 2 2 2 0 Phage minor structural protein GP20 Seryl_tRNA_N PF02403.22 ORF112564 - 6.5 7.0 37.8 0.23 11.7 6.6 3.9 1 1 3 4 4 4 0 Seryl-tRNA synthetase N-terminal domain BLOC1S3 PF15753.5 ORF112564 - 6.7 6.8 14.0 2.6 8.1 5.1 2.8 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 Fib_alpha PF08702.10 ORF112564 - 8.2 6.6 16.7 1.2 9.3 8.8 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family APG6_N PF17675.1 ORF112564 - 8.9 6.8 35.0 1.1 9.8 10.9 3.0 1 1 2 3 3 3 0 Apg6 coiled-coil region DUF3584 PF12128.8 ORF112564 - 9.2 3.6 30.6 10 3.5 12.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) GCD14 PF08704.10 ORF112564 - 9.3 5.8 8.7 0.48 10.1 0.6 2.1 1 1 1 2 2 2 0 tRNA methyltransferase complex GCD14 subunit YscO PF07321.12 ORF112564 - 9.6 6.2 38.3 0.77 9.7 6.0 3.1 1 1 1 3 3 3 0 Type III secretion protein YscO HP0268 PF18618.1 ORF109227 - 0.9 10.0 8.3 4.5 7.8 0.2 3.3 3 0 0 3 3 3 0 HP0268 Peptidase_C24 PF03510.14 ORF106817 - 0.075 13.5 0.3 11 6.5 0.0 2.3 2 0 0 2 2 2 0 2C endopeptidase (C24) cysteine protease family HSCB_C PF07743.13 ORF103470 - 0.51 10.9 4.1 2 9.0 0.3 2.4 2 0 0 2 2 2 0 HSCB C-terminal oligomerisation domain Perilipin PF03036.16 ORF101706 - 0.023 13.7 3.4 0.027 13.5 3.4 1.1 1 0 0 1 1 1 0 Perilipin family PLAC8 PF04749.17 ORF101703 - 2.9e-10 41.0 0.8 5.8e-10 40.0 0.8 1.5 1 0 0 1 1 1 1 PLAC8 family BCCT PF02028.17 ORF101703 - 0.047 12.1 0.4 0.047 12.1 0.4 2.1 2 0 0 2 2 2 0 BCCT, betaine/carnitine/choline family transporter DUF4812 PF16071.5 ORF101703 - 0.12 12.2 0.1 0.85 9.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4812) DUF4097 PF13349.6 NODE_34039_length_637_cov_3.083056_g27165_i0reverse_frame_1 - 0.015 14.7 1.6 0.027 13.8 1.6 1.4 1 0 0 1 1 1 0 Putative adhesin zf-RAG1 PF10426.9 NODE_34039_length_637_cov_3.083056_g27165_i0reverse_frame_1 - 1.6 9.0 3.7 1.4 9.1 0.2 2.6 3 0 0 3 3 3 0 Recombination-activating protein 1 zinc-finger domain DBD_Tnp_Hermes PF10683.9 NODE_34015_length_637_cov_155.192691_g27142_i0forward_frame_1 - 0.15 11.7 1.0 0.31 10.8 0.1 1.8 2 0 0 2 2 2 0 Hermes transposase DNA-binding domain DSPc PF00782.20 NODE_34003_length_637_cov_376.028239_g27133_i0forward_frame_1 - 0.023 14.5 0.0 0.036 13.9 0.0 1.3 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain DUF4224 PF13986.6 NODE_34003_length_637_cov_376.028239_g27133_i0forward_frame_1 - 0.099 12.5 0.5 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) MFS_1 PF07690.16 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 3.8e-24 85.3 17.5 4.4e-24 85.1 17.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 1.3e-06 27.6 3.2 1.3e-06 27.6 3.2 1.7 1 1 1 2 2 2 1 Sugar (and other) transporter Nuc_H_symport PF03825.16 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.00035 19.7 0.8 0.00047 19.3 0.8 1.2 1 0 0 1 1 1 1 Nucleoside H+ symporter MFS_1_like PF12832.7 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.00071 18.5 7.1 0.00085 18.3 7.1 1.2 1 0 0 1 1 1 1 MFS_1 like family TRI12 PF06609.13 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.013 13.9 2.6 0.02 13.3 1.7 1.6 1 1 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) MFS_4 PF06779.14 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.017 14.4 8.9 0.035 13.4 8.8 1.6 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB MFS_3 PF05977.13 NODE_33987_length_638_cov_3.003317_g27123_i0forward_frame_1 - 0.28 9.5 7.0 0.17 10.2 5.5 1.3 1 1 0 1 1 1 0 Transmembrane secretion effector Tox-MPTase5 PF15641.6 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_1 - 0.1 12.6 0.5 0.2 11.7 0.5 1.4 1 0 0 1 1 1 0 Metallopeptidase toxin 5 RPA_interact_N PF14766.6 NODE_33928_length_639_cov_2.627483_g27066_i0reverse_frame_1 - 3.6 7.3 6.9 0.96 9.1 0.4 2.5 2 0 0 2 2 2 0 Replication protein A interacting N-terminal Aminotran_3 PF00202.21 NODE_33928_length_639_cov_2.627483_g27066_i0forward_frame_1 - 1.7e-60 204.8 0.0 1.9e-60 204.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III DUF3652 PF12372.8 NODE_33928_length_639_cov_2.627483_g27066_i0forward_frame_1 - 0.0067 16.3 0.5 5.1 7.1 0.1 2.4 2 0 0 2 2 2 2 Huntingtin protein region DCAF17 PF15802.5 NODE_33924_length_639_cov_4.647351_g27062_i0forward_frame_1 - 1 8.0 8.7 3.3 6.3 2.7 2.1 1 1 1 2 2 2 0 DDB1- and CUL4-associated factor 17 DUF2797 PF10977.8 NODE_33918_length_639_cov_65.506623_g7841_i1reverse_frame_1 - 7.5 6.4 6.2 12 5.7 6.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) Beta_helix PF13229.6 NODE_33878_length_640_cov_40.016529_g27020_i0reverse_frame_3 - 2.4e-05 24.3 7.3 4.3e-05 23.4 7.2 1.3 1 1 0 1 1 1 1 Right handed beta helix region CagS PF16707.5 NODE_33869_length_640_cov_73.133884_g27012_i0reverse_frame_2 - 0.24 11.4 2.1 5.7 6.9 0.3 2.2 1 1 0 2 2 2 0 Cag pathogenicity island protein S of Helicobacter pylori ALMT PF11744.8 NODE_33842_length_641_cov_2.599010_g26991_i0reverse_frame_2 - 0.14 11.0 7.6 0.14 11.0 7.6 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Circo_capsid PF02443.15 NODE_33829_length_641_cov_106.821782_g26978_i0reverse_frame_3 - 0.0065 16.1 0.4 0.013 15.0 0.1 1.6 1 1 0 1 1 1 1 Circovirus capsid protein Orf78 PF06024.12 NODE_33817_length_641_cov_197.127063_g26968_i0forward_frame_3 - 0.087 13.1 2.1 0.095 13.0 0.3 1.9 2 0 0 2 2 2 0 Orf78 (ac78) LCE PF14672.6 NODE_33813_length_641_cov_264.823432_g26964_i0reverse_frame_3 - 0.0015 19.1 21.0 2.1 9.0 0.9 4.3 1 1 3 4 4 4 4 Late cornified envelope CbiX PF01903.17 NODE_33813_length_641_cov_264.823432_g26964_i0reverse_frame_3 - 0.016 15.5 0.1 19 5.6 0.0 3.6 1 1 3 4 4 4 0 CbiX DUF1771 PF08590.10 NODE_33813_length_641_cov_264.823432_g26964_i0reverse_frame_3 - 0.083 13.3 0.2 42 4.6 0.3 2.7 1 1 3 4 4 4 0 Domain of unknown function (DUF1771) DUF3989 PF13150.6 NODE_33813_length_641_cov_264.823432_g26964_i0reverse_frame_2 - 0.7 9.7 8.0 42 4.0 0.1 4.1 4 0 0 4 4 4 0 Protein of unknown function (DUF3989) UBA_5 PF16577.5 NODE_33813_length_641_cov_264.823432_g26964_i0reverse_frame_2 - 0.72 10.0 2.4 7.4 6.8 0.2 3.4 3 1 0 3 3 3 0 UBA domain ORC5_C PF14630.6 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_2 - 0.24 10.9 0.1 0.32 10.5 0.1 1.3 1 1 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus C166 PF17615.2 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_2 - 0.93 9.6 5.2 52 3.9 0.0 3.6 1 1 3 4 4 4 0 Family of unknown function ATP1G1_PLM_MAT8 PF02038.16 NODE_33813_length_641_cov_264.823432_g26964_i0forward_frame_2 - 8.7 5.9 10.6 30 4.2 0.1 4.3 5 0 0 5 5 5 0 ATP1G1/PLM/MAT8 family DUF2153 PF09921.9 NODE_33791_length_642_cov_4.851730_g26943_i0forward_frame_2 - 0.022 14.6 0.3 0.022 14.6 0.3 2.1 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2153) CitMHS PF03600.16 NODE_33790_length_642_cov_6.670511_g26942_i0reverse_frame_3 - 0.16 11.1 2.7 0.15 11.2 2.7 1.1 1 0 0 1 1 1 0 Citrate transporter DUF1700 PF08006.11 NODE_33790_length_642_cov_6.670511_g26942_i0reverse_frame_2 - 0.077 12.5 5.4 0.14 11.7 5.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) TraL PF07178.11 NODE_33790_length_642_cov_6.670511_g26942_i0forward_frame_2 - 0.019 15.4 0.1 0.034 14.6 0.1 1.4 1 0 0 1 1 1 0 TraL protein DUF3177 PF11375.8 NODE_33774_length_642_cov_138.032949_g26929_i0forward_frame_2 - 3.4 7.4 8.4 0.13 12.0 1.7 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3177) Yippee-Mis18 PF03226.14 NODE_33762_length_642_cov_3309.794069_g26918_i0reverse_frame_2 - 7.2e-09 35.8 1.6 1.1e-08 35.2 1.2 1.5 1 1 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly BCAS2 PF05700.11 ORF99806 - 4.4e-18 65.7 11.8 1.6e-15 57.3 11.8 2.0 1 1 0 1 1 1 1 Breast carcinoma amplified sequence 2 (BCAS2) FlxA PF14282.6 ORF99806 - 0.49 10.4 6.4 1.1 9.3 6.4 1.6 1 0 0 1 1 1 0 FlxA-like protein Isochorismatase PF00857.20 ORF99760 - 1e-30 107.2 0.2 2.3e-30 106.0 0.2 1.5 1 1 0 1 1 1 1 Isochorismatase family FAM53 PF15242.6 ORF99760 - 0.22 11.3 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Family of FAM53 Ras PF00071.22 ORF99210 - 4.1e-45 153.3 0.1 5e-45 153.0 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF99210 - 1.2e-27 96.5 0.1 3.2e-27 95.2 0.0 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF99210 - 1.4e-10 40.9 0.0 2e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family AAA_7 PF12775.7 ORF99210 - 0.033 13.7 0.0 0.054 13.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 ORF99210 - 0.051 13.7 0.0 0.088 12.9 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase Lsm_C PF14894.6 ORF99210 - 0.085 12.6 0.4 0.21 11.4 0.1 1.7 2 0 0 2 2 2 0 Lsm C-terminal G-alpha PF00503.20 ORF99210 - 0.099 11.8 0.5 12 5.0 0.0 2.3 2 1 0 2 2 2 0 G-protein alpha subunit Ribonuclease PF00545.20 ORF98026 - 0.0024 18.6 0.0 0.0037 18.0 0.0 1.3 1 0 0 1 1 1 1 ribonuclease UQ_con PF00179.26 ORF93078 - 2e-19 69.6 0.1 3.4e-19 68.9 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF3886 PF13025.6 ORF93078 - 1.1 9.5 8.6 0.14 12.4 3.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3886) Ter PF05472.11 ORF90751 - 0.013 14.5 0.7 0.019 14.0 0.7 1.2 1 0 0 1 1 1 0 DNA replication terminus site-binding protein (Ter protein) Pro_isomerase PF00160.21 ORF90721 - 1.1e-17 64.8 0.1 2.1e-17 63.8 0.0 1.5 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rotamase PF00639.21 ORF90721 - 2.2e-17 63.8 0.1 3.7e-17 63.1 0.1 1.4 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF90721 - 3e-12 47.1 0.5 6.1e-12 46.1 0.5 1.4 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF90721 - 4.1e-05 24.4 0.1 6.3e-05 23.8 0.1 1.3 1 1 0 1 1 1 1 PPIC-type PPIASE domain PCP PF02429.15 ORF90434 - 1.8e-62 210.0 8.5 2.2e-62 209.7 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF90434 - 0.084 13.3 3.4 0.072 13.5 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF732) DUF1619 PF07773.11 ORF89458 - 0.12 12.2 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1619) GPR15L PF15854.5 ORF872 - 0.033 14.4 4.0 0.033 14.4 4.0 2.5 3 0 0 3 3 3 0 G-protein coupled receptor ligand 15 BTB PF00651.31 ORF84854 - 0.0081 16.4 0.0 0.031 14.5 0.0 1.9 2 0 0 2 2 2 1 BTB/POZ domain Methyltransf_31 PF13847.6 ORF84755 - 6.3e-12 45.5 0.1 7.7e-12 45.3 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF84755 - 1.7e-11 44.6 0.0 2.5e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF84755 - 6.3e-11 42.8 0.0 9.7e-11 42.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF84755 - 7.5e-09 36.2 0.0 1.1e-08 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF84755 - 9.1e-05 22.4 0.0 0.00012 21.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF84755 - 0.00015 21.2 0.0 0.00021 20.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 ORF84755 - 0.00049 19.7 0.0 0.00078 19.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 ORF84755 - 0.0024 17.5 0.4 0.0055 16.3 0.1 1.7 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW N2227 PF07942.12 ORF84755 - 0.0066 15.7 0.0 0.037 13.2 0.0 2.0 1 1 1 2 2 2 1 N2227-like protein DUF2200 PF09966.9 ORF84755 - 0.0068 16.5 0.2 0.036 14.2 0.0 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2200) Methyltransf_32 PF13679.6 ORF84755 - 0.013 15.5 0.0 0.017 15.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 ORF84755 - 0.015 14.6 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase BBS2_N PF14781.6 ORF84755 - 0.067 13.1 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Methyltransf_18 PF12847.7 ORF84755 - 0.097 12.6 0.0 0.19 11.7 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain Pox_MCEL PF03291.16 ORF84755 - 0.13 11.4 0.1 0.99 8.4 0.1 2.0 1 1 0 1 1 1 0 mRNA capping enzyme Peptidase_C1 PF00112.23 ORF83614 - 3.7e-24 86.0 1.3 4.6e-24 85.7 1.3 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF83614 - 0.0012 18.7 0.0 0.0029 17.5 0.0 1.6 1 1 0 1 1 1 1 Peptidase family C1 propeptide RelA_SpoT PF04607.17 ORF81651 - 0.11 12.8 1.3 0.15 12.4 0.2 1.9 2 0 0 2 2 2 0 Region found in RelA / SpoT proteins BBP7 PF07585.11 ORF80313 - 0.1 11.7 0.1 0.21 10.7 0.0 1.4 1 1 0 1 1 1 0 Putative beta barrel porin-7 (BBP7) Anti-TRAP PF15777.5 ORF79353 - 0.29 11.1 0.1 0.29 11.1 0.1 3.0 3 1 0 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein DBD_Tnp_Mut PF03108.15 ORF79240 - 2.4 8.2 6.5 0.61 10.1 1.2 2.5 3 0 0 3 3 3 0 MuDR family transposase Isochorismatase PF00857.20 ORF78779 - 3.6e-32 111.9 0.3 8.4e-32 110.7 0.3 1.5 1 1 0 1 1 1 1 Isochorismatase family FAM53 PF15242.6 ORF78779 - 0.22 11.3 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Family of FAM53 Sulfatase_C PF14707.6 ORF77973 - 0.076 13.8 1.0 0.93 10.2 1.0 2.3 1 1 0 1 1 1 0 C-terminal region of aryl-sulfatase NYAP_C PF15452.6 ORF77733 - 0.0031 17.4 0.2 0.84 9.4 0.0 2.1 2 0 0 2 2 2 2 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter Cytochrome_P460 PF16694.5 ORF76789 - 0.07 13.5 0.1 5.4 7.4 0.0 2.2 2 0 0 2 2 2 0 Cytochrome P460 Cytochrome_CBB3 PF13442.6 ORF76789 - 0.12 12.8 1.9 9.9 6.6 0.6 2.4 2 0 0 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III NYAP_C PF15452.6 ORF74425 - 0.0031 17.4 0.2 0.84 9.4 0.0 2.1 2 0 0 2 2 2 2 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter Oxidored_q2 PF00420.24 ORF74366 - 0.0019 17.8 0.7 0.0019 17.8 0.7 2.3 2 1 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABC_tran PF00005.27 ORF71922 - 7.1e-13 49.2 0.2 7.1e-11 42.8 0.0 2.2 2 1 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF71922 - 5.7e-07 29.2 0.3 1e-06 28.4 0.3 1.3 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 ORF71922 - 7.4e-07 28.3 0.0 1.4e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 Predicted ATPase of the ABC class Dus PF01207.17 ORF71922 - 0.00087 18.5 0.7 0.001 18.2 0.7 1.2 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) SbcCD_C PF13558.6 ORF71922 - 0.0021 18.3 0.6 0.041 14.1 0.6 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit DUF438 PF04282.13 ORF71922 - 0.068 13.1 1.2 0.25 11.3 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF438) PilO PF04350.13 ORF71922 - 0.071 13.3 0.2 0.17 12.0 0.1 1.7 1 1 0 1 1 1 0 Pilus assembly protein, PilO PCP PF02429.15 ORF71675 - 1.8e-62 210.0 8.5 2.2e-62 209.7 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF71675 - 0.084 13.3 3.4 0.072 13.5 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF732) PCP PF02429.15 ORF67068 - 1.8e-62 210.0 8.5 2.2e-62 209.7 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF67068 - 0.084 13.3 3.4 0.072 13.5 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF732) FAM70 PF14967.6 ORF64586 - 0.78 9.1 5.0 0.63 9.5 3.6 1.5 1 1 0 1 1 1 0 FAM70 protein HEAT_2 PF13646.6 ORF62695 - 5.4e-13 49.1 14.0 1.9e-08 34.6 5.2 2.3 2 0 0 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF62695 - 1.7e-08 34.0 14.9 0.016 15.4 0.2 5.0 5 0 0 5 5 5 3 HEAT repeat Adaptin_N PF01602.20 ORF62695 - 0.0017 17.0 0.1 0.0022 16.6 0.1 1.2 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF62695 - 0.0029 17.7 0.2 0.046 13.8 0.0 2.5 1 1 2 3 3 3 2 non-SMC mitotic condensation complex subunit 1 HEAT_PBS PF03130.16 ORF62695 - 0.52 11.1 14.4 0.95 10.3 0.3 4.4 4 1 0 4 4 4 0 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 ORF62695 - 0.72 10.4 15.8 2.4 8.8 1.9 4.2 2 2 2 4 4 4 0 HEAT-like repeat HTH_18 PF12833.7 ORF62072 - 7.3e-18 64.6 0.0 1.3e-17 63.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF62072 - 3.7e-09 36.4 0.1 9.3e-05 22.4 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family RDD PF06271.12 ORF62072 - 0.023 14.9 0.1 0.031 14.5 0.1 1.4 1 0 0 1 1 1 0 RDD family HTH_38 PF13936.6 ORF62072 - 0.17 11.6 0.1 2.3 8.1 0.0 2.6 3 0 0 3 3 3 0 Helix-turn-helix domain PCP PF02429.15 ORF61981 - 2.6e-62 209.4 8.3 3.2e-62 209.1 8.3 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF61981 - 0.072 13.5 3.2 0.071 13.5 1.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF732) PRAI PF00697.22 ORF57343 - 3.2e-64 216.3 0.0 3.7e-64 216.1 0.0 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PCP PF02429.15 ORF56383 - 1.8e-62 210.0 8.5 2.2e-62 209.7 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF56383 - 0.084 13.3 3.4 0.072 13.5 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF732) Aminotran_3 PF00202.21 ORF54392 - 5.6e-46 157.0 0.0 6.2e-46 156.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Cyt-b5 PF00173.28 ORF51442 - 1.6e-38 130.7 0.1 6.2e-18 64.7 0.0 2.2 2 0 0 2 2 2 2 Cytochrome b5-like Heme/Steroid binding domain Jiv90 PF14901.6 ORF51442 - 0.043 14.0 0.0 9.8 6.4 0.0 2.3 2 0 0 2 2 2 0 Cleavage inducing molecular chaperone EFP_N PF08207.12 ORF51442 - 0.13 12.3 0.0 8.3 6.5 0.0 2.4 2 0 0 2 2 2 0 Elongation factor P (EF-P) KOW-like domain FtsX_ECD PF18075.1 ORF50921 - 0.016 15.8 0.2 0.028 15.0 0.2 1.3 1 0 0 1 1 1 0 FtsX extracellular domain B-block_TFIIIC PF04182.12 ORF49831 - 0.0034 17.5 0.1 0.0084 16.3 0.1 1.7 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC N_NLPC_P60 PF12912.7 ORF4644 - 0.002 18.5 0.1 0.0041 17.5 0.1 1.5 1 0 0 1 1 1 1 NLPC_P60 stabilising domain, N term CSRNP_N PF16019.5 ORF43996 - 0.32 10.9 11.2 0.49 10.3 11.2 1.2 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Chitin_synth_2 PF03142.15 ORF43996 - 0.4 9.2 3.4 0.64 8.6 3.4 1.3 1 0 0 1 1 1 0 Chitin synthase ECH_1 PF00378.20 ORF41286 - 2.4e-30 105.7 0.2 3.5e-30 105.1 0.2 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF41286 - 2.1e-09 37.4 0.0 2.5e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF1104 PF06518.11 ORF41286 - 0.00049 20.4 1.6 0.0013 19.1 1.5 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1104) Efg1 PF10153.9 ORF41286 - 0.028 14.8 0.4 0.045 14.1 0.4 1.3 1 0 0 1 1 1 0 rRNA-processing protein Efg1 Med28 PF11594.8 ORF41286 - 0.063 13.4 0.0 0.079 13.0 0.0 1.1 1 0 0 1 1 1 0 Mediator complex subunit 28 Cdd1 PF11731.8 ORF40797 - 0.083 13.1 0.2 0.16 12.2 0.2 1.4 1 0 0 1 1 1 0 Pathogenicity locus Plant_zn_clust PF10533.9 ORF4058 - 3 7.9 8.6 0.51 10.4 4.4 1.9 2 0 0 2 2 2 0 Plant zinc cluster domain DUF1664 PF07889.12 ORF38101 - 0.004 17.2 0.5 0.004 17.2 0.5 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF1664) DASH_Dam1 PF08653.10 ORF38101 - 0.012 15.4 2.2 0.14 12.0 0.3 2.5 2 0 0 2 2 2 0 DASH complex subunit Dam1 YabA PF06156.13 ORF38101 - 0.036 14.7 6.4 0.036 14.7 6.4 3.7 1 1 3 4 4 4 0 Initiation control protein YabA EMP24_GP25L PF01105.24 ORF38101 - 0.064 13.2 0.6 0.064 13.2 0.6 2.5 1 1 1 3 3 3 0 emp24/gp25L/p24 family/GOLD APG6_N PF17675.1 ORF38101 - 0.25 11.9 40.6 0.15 12.6 22.3 2.3 1 1 0 2 2 2 0 Apg6 coiled-coil region Flagellin_C PF00700.21 ORF38101 - 0.56 10.6 4.9 0.36 11.2 0.3 2.5 2 1 1 3 3 3 0 Bacterial flagellin C-terminal helical region AAA_13 PF13166.6 ORF38101 - 1.3 7.6 17.2 1.7 7.2 17.2 1.0 1 0 0 1 1 1 0 AAA domain CENP-F_leu_zip PF10473.9 ORF38101 - 1.7 8.7 35.8 0.033 14.2 17.7 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HOOK PF05622.12 ORF38101 - 1.9 6.6 32.9 3.7 5.6 30.0 1.9 1 1 1 2 2 2 0 HOOK protein KASH_CCD PF14662.6 ORF38101 - 2.3 8.0 35.2 0.19 11.5 18.5 2.3 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF4407 PF14362.6 ORF38101 - 2.7 7.3 19.9 4 6.7 19.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spc7 PF08317.11 ORF38101 - 3.5 6.4 31.4 0.36 9.7 17.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Sec34 PF04136.15 ORF38101 - 4.5 7.1 14.8 1.5 8.7 1.9 2.9 2 1 1 3 3 3 0 Sec34-like family DUF842 PF05811.13 ORF38101 - 5 6.8 13.9 0.21 11.3 3.9 2.8 2 1 1 3 3 3 0 Eukaryotic protein of unknown function (DUF842) DUF5082 PF16888.5 ORF38101 - 6.1 7.2 21.3 0.6 10.4 4.1 2.8 2 2 2 4 4 4 0 Domain of unknown function (DUF5082) GAS PF13851.6 ORF38101 - 9.5 5.5 34.2 0.051 12.9 16.8 2.3 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding FUSC PF04632.12 ORF38101 - 9.8 4.6 21.7 43 2.4 21.7 1.7 1 1 0 1 1 1 0 Fusaric acid resistance protein family Seryl_tRNA_N PF02403.22 ORF38101 - 9.9 6.5 27.2 4.1 7.7 7.7 3.4 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Golgin_A5 PF09787.9 ORF37293 - 0.023 14.2 6.3 0.032 13.7 6.3 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 ORF37293 - 0.11 11.8 5.6 0.13 11.5 5.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF37293 - 0.51 10.4 9.9 0.66 10.0 8.7 1.8 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding CENP-F_leu_zip PF10473.9 ORF37293 - 0.67 10.0 9.9 16 5.5 10.2 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PB1-F2 PF11986.8 ORF36390 - 0.017 15.4 1.2 0.039 14.2 1.2 1.7 1 1 0 1 1 1 0 Influenza A Proapoptotic protein PCP PF02429.15 ORF36202 - 1.8e-62 210.0 8.5 2.2e-62 209.7 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF36202 - 0.084 13.3 3.4 0.072 13.5 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF732) Cytochrom_C1 PF02167.15 ORF3400 - 1.1e-33 116.9 0.1 1.3e-33 116.6 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C1 family DUF2624 PF11116.8 ORF3091 - 0.027 15.3 0.1 0.069 14.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2624) EssA PF10661.9 ORF3091 - 1.6 8.5 9.1 2.5 7.9 8.9 1.5 1 1 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA JHY PF15261.6 ORF3091 - 9.6 6.9 14.5 0.31 11.7 7.6 1.9 2 0 0 2 2 2 0 Jhy protein Atg14 PF10186.9 ORF3037 - 0.0049 16.0 6.3 0.0063 15.7 6.3 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2594 PF10769.9 ORF3037 - 0.022 14.8 1.0 0.12 12.4 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2594) Cep57_MT_bd PF06657.13 ORF3037 - 0.038 14.4 11.0 0.24 11.9 4.3 2.3 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Mod_r PF07200.13 ORF3037 - 0.047 13.8 12.7 0.24 11.5 7.7 2.2 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Fez1 PF06818.15 ORF3037 - 0.15 12.5 11.6 0.25 11.8 11.7 1.4 1 1 0 1 1 1 0 Fez1 AAA_13 PF13166.6 ORF3037 - 0.2 10.3 3.2 0.24 10.0 3.2 1.2 1 0 0 1 1 1 0 AAA domain COX16 PF14138.6 ORF3037 - 0.31 11.6 2.2 0.82 10.2 2.2 1.7 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 Bacillus_HBL PF05791.11 ORF3037 - 0.32 10.8 4.5 0.17 11.7 1.2 1.8 1 1 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) FlxA PF14282.6 ORF3037 - 0.59 10.1 10.5 0.16 12.0 4.0 2.2 2 0 0 2 2 2 0 FlxA-like protein Sipho_Gp157 PF05565.11 ORF3037 - 0.74 9.8 9.2 0.25 11.4 6.0 1.7 1 1 1 2 2 2 0 Siphovirus Gp157 ACCA PF03255.14 ORF3037 - 0.85 9.5 5.0 2.1 8.2 2.7 2.5 2 1 0 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF2730 PF10805.8 ORF3037 - 1.4 9.0 5.5 0.86 9.7 0.6 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2730) Lectin_N PF03954.14 ORF3037 - 1.5 8.5 6.8 3.7 7.3 2.8 2.3 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain Cep57_CLD_2 PF14197.6 ORF3037 - 2.5 8.2 17.5 1.3 9.2 7.9 3.6 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 YabA PF06156.13 ORF3037 - 2.8 8.6 9.2 36 5.1 0.3 2.7 1 1 1 2 2 2 0 Initiation control protein YabA DUF724 PF05266.14 ORF3037 - 3.5 7.4 9.8 2.1 8.2 7.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Spc7 PF08317.11 ORF3037 - 4.4 6.1 13.6 7.9 5.3 13.6 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein Sec2p PF06428.11 ORF3037 - 4.4 7.4 16.2 0.83 9.7 10.0 2.5 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p Histone_HNS PF00816.21 ORF3037 - 4.4 8.2 9.5 42 5.1 8.2 2.2 1 1 1 2 2 2 0 H-NS histone family GrpE PF01025.19 ORF3037 - 4.6 6.9 9.0 1.6 8.4 4.7 2.0 2 0 0 2 2 2 0 GrpE DivIC PF04977.15 ORF3037 - 6.1 6.7 16.7 1.3 8.8 6.3 3.1 2 1 1 3 3 3 0 Septum formation initiator bZIP_2 PF07716.15 ORF3037 - 8.1 6.6 18.1 1.2 9.3 0.5 3.5 2 1 1 3 3 3 0 Basic region leucine zipper TMF_DNA_bd PF12329.8 ORF3037 - 9.4 6.3 15.5 3.6 7.7 10.2 2.6 2 2 1 3 3 3 0 TATA element modulatory factor 1 DNA binding EMP24_GP25L PF01105.24 ORF28178 - 3.1e-21 76.2 1.2 3.6e-21 75.9 1.2 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Spc24 PF08286.11 ORF28178 - 0.034 14.4 0.1 0.057 13.7 0.1 1.5 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF922 PF06037.11 ORF28178 - 0.17 11.7 0.5 0.24 11.2 0.5 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) DUF2618 PF10940.8 ORF27612 - 0.0058 16.4 0.4 0.025 14.4 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2618) Cdd1 PF11731.8 ORF25973 - 0.083 13.1 0.2 0.16 12.2 0.2 1.4 1 0 0 1 1 1 0 Pathogenicity locus GSK-3_bind PF05350.12 ORF23093 - 0.16 11.3 6.6 0.22 10.8 6.6 1.2 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding DUF1664 PF07889.12 ORF22123 - 0.00069 19.7 5.0 0.15 12.1 1.1 2.5 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) Tropomyosin PF00261.20 ORF22123 - 0.00079 18.9 6.4 0.1 11.9 0.9 2.1 1 1 1 2 2 2 2 Tropomyosin COG2 PF06148.11 ORF22123 - 0.0011 19.0 7.1 0.0054 16.8 0.5 2.2 1 1 1 2 2 2 1 COG (conserved oligomeric Golgi) complex component, COG2 Apolipoprotein PF01442.18 ORF22123 - 0.0011 18.8 8.8 0.0017 18.2 8.8 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain XhlA PF10779.9 ORF22123 - 0.0015 18.6 1.0 0.039 14.1 0.0 2.3 2 0 0 2 2 2 1 Haemolysin XhlA Baculo_PEP_C PF04513.12 ORF22123 - 0.0022 18.0 1.8 1.9 8.5 0.0 2.0 1 1 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus Sin3_corepress PF08295.12 ORF22123 - 0.0044 17.1 1.2 0.0098 15.9 0.2 2.0 2 1 0 2 2 2 1 Sin3 family co-repressor MAP65_ASE1 PF03999.12 ORF22123 - 0.0051 15.6 4.8 0.0058 15.4 4.8 1.1 1 0 0 1 1 1 1 Microtubule associated protein (MAP65/ASE1 family) DUF948 PF06103.11 ORF22123 - 0.0053 17.0 1.2 0.54 10.6 1.2 2.3 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Helo_like_N PF17111.5 ORF22123 - 0.011 15.1 5.7 0.66 9.3 1.1 2.3 1 1 0 2 2 2 0 Fungal N-terminal domain of STAND proteins Ku_PK_bind PF08785.11 ORF22123 - 0.013 15.6 0.7 0.022 14.9 0.7 1.4 1 0 0 1 1 1 0 Ku C terminal domain like BLOC1_2 PF10046.9 ORF22123 - 0.015 15.6 1.1 4.3 7.7 0.1 2.4 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Uso1_p115_C PF04871.13 ORF22123 - 0.017 15.5 5.7 0.26 11.6 0.6 2.3 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Spc7 PF08317.11 ORF22123 - 0.022 13.7 5.1 0.032 13.1 5.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF812 PF05667.11 ORF22123 - 0.026 13.4 4.6 0.039 12.8 4.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Tropomyosin_1 PF12718.7 ORF22123 - 0.027 14.6 5.6 1.1 9.4 0.2 2.2 2 0 0 2 2 2 0 Tropomyosin like HMMR_N PF15905.5 ORF22123 - 0.034 13.6 6.6 0.14 11.6 1.4 2.1 1 1 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal TPR_MLP1_2 PF07926.12 ORF22123 - 0.042 13.9 8.3 0.78 9.8 0.2 2.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF16 PF01519.16 ORF22123 - 0.044 14.3 2.9 2 8.9 3.0 2.2 1 1 0 1 1 1 0 Protein of unknown function DUF16 CheZ PF04344.13 ORF22123 - 0.05 13.5 4.9 0.14 12.1 4.4 1.8 1 1 0 1 1 1 0 Chemotaxis phosphatase, CheZ DUF2046 PF09755.9 ORF22123 - 0.059 12.6 5.7 0.046 13.0 3.7 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) DUF4208 PF13907.6 ORF22123 - 0.078 13.4 0.4 1.2 9.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4208) bZIP_1 PF00170.21 ORF22123 - 0.086 13.0 1.7 1.2 9.3 0.0 3.1 2 2 0 2 2 2 0 bZIP transcription factor COG6 PF06419.11 ORF22123 - 0.09 11.0 4.3 0.041 12.1 1.5 1.7 1 1 0 1 1 1 0 Conserved oligomeric complex COG6 Laminin_II PF06009.12 ORF22123 - 0.091 12.8 2.8 0.98 9.4 0.2 2.1 1 1 1 2 2 2 0 Laminin Domain II GBP_C PF02841.14 ORF22123 - 0.11 11.9 3.9 0.15 11.4 3.9 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain ZYG-11_interact PF05884.12 ORF22123 - 0.15 11.4 1.2 0.21 11.0 1.2 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 Gp-FAR-1 PF05823.12 ORF22123 - 0.18 12.2 0.1 0.24 11.7 0.1 1.3 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Phage_Mu_Gam PF07352.12 ORF22123 - 0.18 11.7 0.7 0.3 11.0 0.1 1.6 2 0 0 2 2 1 0 Bacteriophage Mu Gam like protein DUF1640 PF07798.11 ORF22123 - 0.21 11.7 4.9 1.2 9.2 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) UPF0242 PF06785.11 ORF22123 - 0.28 11.2 6.1 3.5 7.7 0.3 2.1 1 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 ORF22123 - 0.31 9.6 0.7 0.62 8.6 0.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A ZapB PF06005.12 ORF22123 - 0.32 11.5 7.8 4.2 7.9 0.5 2.6 2 0 0 2 2 2 0 Cell division protein ZapB Jnk-SapK_ap_N PF09744.9 ORF22123 - 0.5 10.6 9.7 2 8.6 4.2 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 HAUS6_N PF14661.6 ORF22123 - 0.59 9.7 5.1 4.2 6.9 0.6 2.0 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus YabA PF06156.13 ORF22123 - 0.87 10.3 5.3 8.9 7.0 2.9 2.6 1 1 1 2 2 2 0 Initiation control protein YabA Nbl1_Borealin_N PF10444.9 ORF22123 - 0.96 9.1 3.9 5.3 6.8 0.7 2.7 2 1 0 2 2 2 0 Nbl1 / Borealin N terminal Fzo_mitofusin PF04799.13 ORF22123 - 1.7 8.2 5.8 2.7 7.5 1.1 2.2 1 1 1 2 2 2 0 fzo-like conserved region DUF4140 PF13600.6 ORF22123 - 2.9 8.4 6.6 18 5.8 0.3 2.4 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) FUSC PF04632.12 ORF22123 - 4.1 5.8 8.0 5 5.5 8.0 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Golgin_A5 PF09787.9 ORF21899 - 0.023 14.2 6.3 0.032 13.7 6.3 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 ORF21899 - 0.11 11.8 5.6 0.13 11.5 5.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF21899 - 0.51 10.4 9.9 0.66 10.0 8.7 1.8 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding CENP-F_leu_zip PF10473.9 ORF21899 - 0.67 10.0 9.9 16 5.5 10.2 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PCP PF02429.15 ORF21289 - 1.8e-62 210.0 8.5 2.2e-62 209.7 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF21289 - 0.084 13.3 3.4 0.072 13.5 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF732) Ras PF00071.22 ORF2048 - 1.3e-50 171.2 1.8 1.5e-50 171.0 1.8 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF2048 - 2.4e-33 114.9 0.5 4.4e-33 114.0 0.5 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF2048 - 2e-17 63.2 0.3 2.5e-17 62.9 0.3 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF2048 - 6.8e-06 25.8 0.2 3e-05 23.7 0.2 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF2048 - 7.7e-06 26.0 0.0 1.1e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF2048 - 6.7e-05 22.4 0.1 0.00012 21.6 0.0 1.3 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF2048 - 0.00021 20.7 1.0 0.00028 20.3 1.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF2048 - 0.00022 21.2 0.0 0.43 10.5 0.0 2.9 1 1 1 3 3 3 1 RsgA GTPase AAA_7 PF12775.7 ORF2048 - 0.00073 19.1 0.0 0.0013 18.3 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region PduV-EutP PF10662.9 ORF2048 - 0.0045 16.7 0.1 0.094 12.5 0.1 2.1 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation TniB PF05621.11 ORF2048 - 0.0084 15.5 0.0 0.014 14.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial TniB protein Septin PF00735.18 ORF2048 - 0.01 15.2 0.0 0.019 14.2 0.0 1.4 1 0 0 1 1 1 0 Septin Chorein_N PF12624.7 ORF2048 - 0.017 15.2 0.2 0.56 10.3 0.1 2.4 2 0 0 2 2 2 0 N-terminal region of Chorein or VPS13 AAA_22 PF13401.6 ORF2048 - 0.024 14.9 0.0 1 9.6 0.0 2.3 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF2048 - 0.16 12.4 0.0 0.23 11.8 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain DUF881 PF05949.12 ORF2048 - 0.19 11.6 0.0 0.31 10.9 0.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF881) Kelch_1 PF01344.25 ORF19745 - 1.7e-23 81.9 0.3 2.8e-11 42.8 0.1 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 ORF19745 - 1.4e-20 73.1 0.0 2.7e-08 33.9 0.0 3.3 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF19745 - 9.4e-16 57.5 0.1 3.3e-07 30.4 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 ORF19745 - 1.6e-15 56.4 1.9 5e-07 29.4 0.1 2.6 2 1 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF19745 - 2.2e-15 56.3 0.1 2.8e-06 27.2 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF19745 - 8.6e-15 54.5 0.0 4e-06 26.7 0.0 2.3 2 0 0 2 2 2 2 Galactose oxidase, central domain FANCD2OS PF15124.6 ORF19745 - 0.00036 20.8 0.0 0.00049 20.4 0.0 1.2 1 0 0 1 1 1 1 FANCD2 opposite strand protein Sugar_tr PF00083.24 ORF18737 - 2e-13 50.0 0.3 2.4e-13 49.8 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2070 PF09843.9 ORF18737 - 1.3 7.2 5.6 3.7 5.7 3.7 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) Prominin PF05478.11 ORF18284 - 0.18 9.8 2.0 0.21 9.5 2.0 1.1 1 0 0 1 1 1 0 Prominin YpjP PF14005.6 ORF18284 - 0.3 11.1 1.9 4 7.5 0.2 2.4 1 1 0 2 2 2 0 YpjP-like protein 4HB_MCP_1 PF12729.7 ORF18284 - 0.44 10.1 5.6 0.62 9.6 5.6 1.1 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction Ras PF00071.22 ORF16005 - 3.6e-54 182.8 1.6 4.5e-54 182.4 1.6 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF16005 - 2.6e-34 118.0 0.8 3.7e-34 117.5 0.3 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF16005 - 2e-21 76.2 0.4 2.4e-21 75.9 0.4 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF16005 - 1.2e-06 28.0 1.1 1.5e-06 27.8 1.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF16005 - 3.3e-06 26.8 0.4 5.2e-06 26.1 0.3 1.3 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF16005 - 1.5e-05 25.1 0.1 2.9e-05 24.1 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Nuc_deoxyrib_tr PF05014.15 ORF16005 - 0.013 15.5 0.1 0.018 15.0 0.1 1.2 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase PhageP22-tail PF09251.10 ORF16005 - 0.014 13.8 0.2 0.02 13.3 0.2 1.2 1 0 0 1 1 1 0 Salmonella phage P22 tail-spike Apelin PF15360.6 ORF152895 - 0.095 13.3 0.3 0.095 13.3 0.3 3.1 3 0 0 3 3 3 0 APJ endogenous ligand PRP38_assoc PF12871.7 ORF149894 - 0.014 16.0 12.5 0.014 16.0 12.5 1.6 2 0 0 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term zf-RING_2 PF13639.6 ORF149894 - 0.042 14.2 6.3 0.069 13.5 6.3 1.4 1 0 0 1 1 1 0 Ring finger domain DUF1272 PF06906.11 ORF149894 - 0.042 13.9 2.4 0.099 12.7 2.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) C1_2 PF03107.16 ORF149894 - 0.069 13.5 2.0 0.069 13.5 2.0 2.0 2 0 0 2 2 2 0 C1 domain zf-C3HC4_2 PF13923.6 ORF149894 - 0.21 11.5 4.5 0.34 10.8 4.5 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) CDC45 PF02724.14 ORF149894 - 0.36 9.0 13.1 0.41 8.9 13.1 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF2175 PF09943.9 ORF149894 - 1.6 9.0 5.3 0.62 10.4 1.5 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) Cna_B PF05738.13 ORF147975 - 0.016 15.7 1.0 0.016 15.7 1.0 1.9 2 0 0 2 2 2 0 Cna protein B-type domain DUF4735 PF15882.5 ORF147975 - 0.18 11.2 5.1 0.12 11.8 3.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4735) zf-P11 PF03854.14 ORF1474 - 2 8.2 5.7 8.4 6.1 0.1 3.0 3 0 0 3 3 3 0 P-11 zinc finger PCP PF02429.15 ORF142836 - 1.8e-62 210.0 8.5 2.2e-62 209.7 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF142836 - 0.084 13.3 3.4 0.072 13.5 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF732) AAA PF00004.29 ORF142526 - 3.9e-06 27.3 0.0 6.5e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Golgin_A5 PF09787.9 ORF140101 - 0.023 14.2 6.3 0.032 13.7 6.3 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 ORF140101 - 0.11 11.8 5.6 0.13 11.5 5.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF140101 - 0.51 10.4 9.9 0.66 10.0 8.7 1.8 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding CENP-F_leu_zip PF10473.9 ORF140101 - 0.67 10.0 9.9 16 5.5 10.2 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SIT PF15330.6 ORF136076 - 0.0047 17.4 0.1 0.0089 16.5 0.1 1.5 1 0 0 1 1 1 1 SHP2-interacting transmembrane adaptor protein, SIT DUF898 PF05987.13 ORF136076 - 0.021 13.9 3.5 0.049 12.7 3.6 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF898) Orf78 PF06024.12 ORF136076 - 2 8.7 4.2 2.6 8.4 0.4 2.5 2 1 0 2 2 2 0 Orf78 (ac78) Ribosomal_S7 PF00177.21 ORF134950 - 0.15 11.7 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S7p/S5e FtsJ PF01728.19 ORF133928 - 3.9e-42 144.4 0.0 5e-42 144.0 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Acyl-CoA_dh_1 PF00441.24 ORF132834 - 1e-46 158.9 1.3 1.2e-46 158.6 1.3 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF132834 - 2.5e-15 56.9 0.6 3.3e-15 56.5 0.6 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF132834 - 0.0013 18.9 0.0 0.0024 18.0 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Glyco_hydro_114 PF03537.13 ORF132834 - 0.011 15.0 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 0 Glycoside-hydrolase family GH114 DUF1266 PF06889.11 ORF131841 - 2.2e-42 145.1 7.5 2.6e-42 144.9 7.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1266) NfrA_C PF13283.6 ORF131841 - 0.0096 15.4 0.5 0.013 15.0 0.5 1.3 1 0 0 1 1 1 1 Bacteriophage N adsorption protein A C-term Ank_2 PF12796.7 ORF130228 - 4.6e-42 142.5 9.5 1.6e-15 57.5 0.0 2.9 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF130228 - 1.1e-28 99.1 2.6 5.9e-09 36.3 0.1 3.6 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF130228 - 5.6e-21 74.3 5.4 2.6e-07 30.8 0.1 5.1 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF130228 - 2.8e-18 65.5 5.8 7e-05 23.1 0.0 4.7 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF130228 - 3.1e-18 64.0 0.6 0.0054 17.1 0.0 5.1 5 0 0 5 5 5 4 Ankyrin repeat NYAP_C PF15452.6 ORF124649 - 0.0031 17.4 0.2 0.84 9.4 0.0 2.1 2 0 0 2 2 2 2 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter BPL_N PF09825.9 ORF123344 - 0.089 11.9 0.2 0.1 11.6 0.2 1.1 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal Otopetrin PF03189.13 ORF123344 - 0.21 10.4 1.2 0.25 10.1 1.2 1.3 1 1 0 1 1 1 0 Otopetrin DUF5383 PF17355.2 ORF123344 - 0.71 10.3 5.3 0.76 10.2 2.2 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5383) DUF4820 PF16091.5 ORF123344 - 4.6 6.5 8.5 4.4 6.6 7.3 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4820) AUX_IAA PF02309.16 ORF122353 - 8.1 6.2 10.8 13 5.6 10.8 1.3 1 0 0 1 1 1 0 AUX/IAA family AAA PF00004.29 ORF121520 - 2.5e-15 57.1 0.0 3.7e-15 56.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF121520 - 2.4e-05 24.4 0.0 9.9e-05 22.4 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF121520 - 7.5e-05 23.0 0.6 1.3 9.3 0.0 3.0 1 1 2 3 3 3 2 AAA domain AAA_16 PF13191.6 ORF121520 - 0.0017 18.8 0.4 0.0077 16.6 0.4 2.2 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF121520 - 0.0026 17.0 0.0 0.0072 15.5 0.0 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF815) AAA_11 PF13086.6 ORF121520 - 0.0089 15.8 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF121520 - 0.011 15.9 0.0 0.025 14.8 0.0 1.7 1 1 1 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF121520 - 0.024 15.0 0.0 0.044 14.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase IPT PF01745.16 ORF121520 - 0.039 13.3 0.0 0.069 12.5 0.0 1.5 1 0 0 1 1 1 0 Isopentenyl transferase Mg_chelatase PF01078.21 ORF121520 - 0.051 13.0 0.3 3.1 7.1 0.1 2.2 1 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 ORF121520 - 0.052 14.1 0.0 0.091 13.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF121520 - 0.064 13.3 0.0 0.18 11.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain Protoglobin PF11563.8 ORF121520 - 0.064 13.1 0.0 0.096 12.6 0.0 1.3 1 0 0 1 1 1 0 Protoglobin TIP49 PF06068.13 ORF121520 - 0.12 11.5 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain RuvB_N PF05496.12 ORF121520 - 0.19 11.5 0.0 0.41 10.4 0.0 1.6 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain WXG100 PF06013.12 ORF120431 - 0.31 11.3 4.9 2.7 8.3 0.6 2.8 3 0 0 3 3 3 0 Proteins of 100 residues with WXG Fez1 PF06818.15 ORF120431 - 0.46 10.9 15.4 0.81 10.1 15.3 1.5 1 1 0 1 1 1 0 Fez1 Com_YlbF PF06133.11 ORF120431 - 0.56 10.8 13.6 0.36 11.4 2.8 2.4 2 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA DUF5082 PF16888.5 ORF120431 - 0.8 10.0 8.9 0.49 10.7 1.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) Cep57_CLD_2 PF14197.6 ORF120431 - 0.93 9.6 14.9 0.11 12.6 2.3 3.9 3 2 0 3 3 3 0 Centrosome localisation domain of PPC89 DUF16 PF01519.16 ORF120431 - 0.99 9.9 5.1 1.5 9.4 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function DUF16 THOC7 PF05615.13 ORF120431 - 4.9 7.4 14.3 3 8.1 3.0 2.4 1 1 0 2 2 2 0 Tho complex subunit 7 OmpH PF03938.14 ORF120431 - 5.4 7.4 15.9 6.4 7.1 2.8 2.2 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Peptidase_C1 PF00112.23 ORF119864 - 2.4e-33 116.1 3.2 3.1e-33 115.7 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF119864 - 0.00052 19.9 0.0 0.0029 17.5 0.0 2.1 2 1 0 2 2 2 1 Peptidase family C1 propeptide Peptidase_C2 PF00648.21 ORF119864 - 0.032 13.2 0.1 0.04 12.9 0.1 1.2 1 0 0 1 1 1 0 Calpain family cysteine protease Peptidase_C1_2 PF03051.15 ORF119864 - 0.093 11.5 0.1 1.1 8.0 0.1 2.0 1 1 1 2 2 2 0 Peptidase C1-like family Peptidase_C14 PF00656.22 ORF117907 - 3.2e-18 66.6 0.2 6.3e-18 65.6 0.2 1.4 1 1 0 1 1 1 1 Caspase domain NYAP_C PF15452.6 ORF117193 - 0.0031 17.4 0.2 0.84 9.4 0.0 2.1 2 0 0 2 2 2 2 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter N_NLPC_P60 PF12912.7 ORF116189 - 0.002 18.5 0.1 0.0041 17.5 0.1 1.5 1 0 0 1 1 1 1 NLPC_P60 stabilising domain, N term Ank_4 PF13637.6 ORF114989 - 2.5e-06 27.9 0.1 0.21 12.2 0.0 3.7 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF114989 - 0.00086 19.8 0.9 0.0032 18.0 0.8 2.2 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF114989 - 0.032 14.7 0.0 19 6.2 0.0 3.1 2 0 0 2 2 2 0 Ankyrin repeat SHIPPO-rpt PF07004.12 ORF114704 - 3.5 8.7 5.6 49 5.1 0.1 3.8 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat DUF559 PF04480.12 ORF114278 - 6.1e-49 164.4 0.7 8.8e-49 163.9 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF559) MTES_1575 PF18741.1 ORF114278 - 2e-12 47.1 0.8 5.4e-12 45.7 0.3 1.8 1 1 1 2 2 2 1 REase_MTES_1575 V-ATPase_C PF03223.15 ORF114278 - 0.19 11.1 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 V-ATPase subunit C ESF1 PF18209.1 ORF114278 - 0.96 9.4 11.4 0.23 11.4 5.0 3.0 2 0 0 2 2 2 0 Embryo surrounding factor 1 Pkinase PF00069.25 ORF114004 - 5.6e-37 127.5 0.0 6.5e-37 127.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF114004 - 1.9e-12 47.0 0.0 2.5e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF114004 - 0.00017 21.0 0.0 0.00024 20.5 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Syntaxin-6_N PF09177.11 ORF112068 - 0.047 14.2 3.6 0.038 14.6 1.7 1.8 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Uds1 PF15456.6 ORF112068 - 0.55 10.4 4.2 0.86 9.8 3.0 1.9 1 1 1 2 2 2 0 Up-regulated During Septation MORN PF02493.20 ORF109141 - 1.5e-28 97.0 56.5 1.6e-07 30.8 1.8 6.7 7 0 0 7 7 7 6 MORN repeat Tudor_2 PF18104.1 ORF109141 - 0.001 18.7 2.7 2.1 8.1 0.0 3.7 3 0 0 3 3 3 2 Jumonji domain-containing protein 2A Tudor domain DUF3048_C PF17479.2 ORF109141 - 0.039 14.3 7.5 0.44 10.9 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain META PF03724.16 ORF10675 - 1.1e-05 25.4 0.0 1.7e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 META domain SPRY PF00622.28 ORF10675 - 0.11 12.6 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 SPRY domain Thioredoxin_4 PF13462.6 ORF105621 - 2.2e-09 37.7 0.1 5.5e-09 36.4 0.1 1.6 1 1 0 1 1 1 1 Thioredoxin Malate_synthase PF01274.22 ORF103995 - 3.4e-65 220.3 1.0 3.8e-65 220.1 1.0 1.0 1 0 0 1 1 1 1 Malate synthase TetR_C_8 PF14278.6 ORF103995 - 0.083 13.0 0.0 0.27 11.4 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator C-terminal region Pkinase PF00069.25 ORF1026 - 9e-25 87.5 1.2 1.1e-24 87.2 1.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF1026 - 1.3e-15 57.4 0.4 1.7e-15 57.0 0.4 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF1026 - 6.7e-08 32.1 0.1 1.3e-07 31.2 0.1 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF1026 - 3.3e-07 30.5 0.0 0.0008 19.4 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF1026 - 2.5e-05 24.0 0.2 3.7e-05 23.4 0.2 1.4 1 0 0 1 1 1 1 RIO1 family DUF1679 PF07914.11 ORF1026 - 0.0087 15.0 0.2 0.02 13.8 0.2 1.5 1 1 1 2 2 2 2 Protein of unknown function (DUF1679) Kinase-like PF14531.6 ORF1026 - 0.044 13.1 1.4 0.056 12.7 0.2 1.8 2 1 1 3 3 3 0 Kinase-like DUF4803 PF16061.5 ORF102235 - 0.26 10.7 3.7 0.37 10.2 3.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4803) GET2 PF08690.10 ORF100416 - 0.072 12.8 2.9 0.11 12.1 2.9 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 TCR PF03638.15 NODE_34183_length_634_cov_2.527546_g27290_i0reverse_frame_1 - 1.5e-16 60.4 56.8 5.4e-09 36.2 14.3 2.9 3 0 0 3 3 3 2 Tesmin/TSO1-like CXC domain, cysteine-rich domain DctA-YdbH PF11739.8 NODE_34180_length_634_cov_3.958264_g27287_i0reverse_frame_1 - 2.8e-46 157.9 0.1 3.2e-46 157.7 0.1 1.1 1 0 0 1 1 1 1 Dicarboxylate transport UMP1 PF05348.11 NODE_34167_length_634_cov_92.834725_g27277_i0forward_frame_1 - 0.17 12.1 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Proteasome maturation factor UMP1 COPIIcoated_ERV PF07970.12 NODE_34153_length_634_cov_248.801336_g27264_i0reverse_frame_1 - 1.1e-44 152.9 5.3 1.7e-40 139.2 0.0 2.0 1 1 1 2 2 2 2 Endoplasmic reticulum vesicle transporter DUF1822 PF08852.11 NODE_34146_length_634_cov_270.626043_g27257_i0reverse_frame_1 - 0.34 9.9 6.0 0.44 9.5 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1822) Herpes_UL49_2 PF04823.12 NODE_34146_length_634_cov_270.626043_g27257_i0forward_frame_1 - 6.7 6.9 7.1 0.44 10.7 1.1 2.1 2 1 0 2 2 2 0 Herpesvirus UL49 tegument protein PRD PF00874.20 NODE_34127_length_635_cov_3.178333_g27243_i0reverse_frame_1 - 1.7e-33 114.7 0.7 3.4e-25 88.2 0.0 2.3 2 0 0 2 2 2 2 PRD domain CAT_RBD PF03123.15 NODE_34127_length_635_cov_3.178333_g27243_i0reverse_frame_1 - 6.2e-12 45.3 0.1 1e-11 44.6 0.1 1.3 1 0 0 1 1 1 1 CAT RNA binding domain TTL PF03133.15 NODE_34123_length_635_cov_3.551667_g27239_i0reverse_frame_1 - 5.1e-05 22.6 0.8 8.5e-05 21.8 0.8 1.3 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family DUF1279 PF06916.13 NODE_34114_length_635_cov_84.090000_g27230_i0reverse_frame_1 - 0.16 12.5 2.3 0.47 11.0 2.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1279) PqqD PF05402.12 NODE_34092_length_635_cov_249.350000_g27209_i0reverse_frame_1 - 0.031 14.6 0.1 0.065 13.5 0.1 1.5 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) 3Beta_HSD PF01073.19 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 4.5e-16 58.7 0.0 5.3e-16 58.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 2e-13 50.4 0.2 5.9e-13 48.8 0.2 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 6.4e-07 28.8 0.0 8e-07 28.5 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 3.4e-06 26.4 0.1 0.00012 21.3 0.1 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 1.2e-05 25.3 0.0 3.1e-05 23.9 0.0 1.6 2 0 0 2 2 2 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 NODE_34085_length_635_cov_975.223333_g27202_i0forward_frame_1 - 0.00019 20.9 0.3 0.00026 20.5 0.3 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase PROL5-SMR PF15621.6 NODE_34079_length_636_cov_2.484193_g27197_i0forward_frame_1 - 0.065 13.8 0.2 0.12 12.9 0.2 1.4 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family MCR_alpha PF02249.17 NODE_34077_length_636_cov_3.078203_g27195_i0forward_frame_1 - 0.073 13.5 0.1 0.13 12.7 0.1 1.5 1 1 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain Pept_tRNA_hydro PF01195.19 NODE_34066_length_636_cov_104.376040_g27185_i0forward_frame_1 - 6e-34 117.5 0.5 7.5e-34 117.1 0.5 1.1 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase Stm1_N PF09598.10 NODE_34058_length_636_cov_191.765391_g27179_i0reverse_frame_1 - 0.0022 18.8 2.1 0.0022 18.8 2.1 3.2 4 1 0 4 4 4 1 Stm1 Nuclease_act PF08133.11 NODE_34039_length_637_cov_3.083056_g27165_i0reverse_frame_3 - 0.092 12.9 0.2 0.24 11.6 0.2 1.7 1 0 0 1 1 1 0 Anticodon nuclease activator family LTP_2 PF14368.6 NODE_34015_length_637_cov_155.192691_g27142_i0forward_frame_3 - 0.069 13.3 3.7 0.14 12.3 3.7 1.6 1 0 0 1 1 1 0 Probable lipid transfer DUF1411 PF07199.11 NODE_34008_length_637_cov_294.086379_g27137_i0reverse_frame_3 - 0.024 14.3 0.8 0.29 10.8 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1411) RSN1_TM PF13967.6 NODE_34003_length_637_cov_376.028239_g27133_i0reverse_frame_2 - 0.027 14.2 1.1 0.31 10.8 1.2 2.1 2 0 0 2 2 2 0 Late exocytosis, associated with Golgi transport DSPc PF00782.20 NODE_34003_length_637_cov_376.028239_g27133_i0forward_frame_2 - 2.7e-07 30.5 0.0 4.6e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_34003_length_637_cov_376.028239_g27133_i0forward_frame_2 - 0.015 14.8 0.1 0.018 14.6 0.1 1.3 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 NODE_34003_length_637_cov_376.028239_g27133_i0forward_frame_2 - 0.059 13.3 0.1 0.077 12.9 0.1 1.3 1 0 0 1 1 1 0 Tyrosine phosphatase family TetR_N PF00440.23 NODE_33987_length_638_cov_3.003317_g27123_i0reverse_frame_3 - 0.0012 18.6 0.0 0.0018 18.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family C1_2 PF03107.16 NODE_33987_length_638_cov_3.003317_g27123_i0reverse_frame_3 - 0.17 12.2 0.4 0.17 12.2 0.4 2.9 2 1 0 2 2 2 0 C1 domain NiFe_hyd_SSU_C PF14720.6 NODE_33985_length_638_cov_3.792703_g27121_i0reverse_frame_3 - 2.8e-32 110.9 4.9 5.7e-32 109.9 4.9 1.5 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal Oxidored_q6 PF01058.22 NODE_33985_length_638_cov_3.792703_g27121_i0reverse_frame_3 - 4.2e-20 71.9 0.3 5.9e-20 71.4 0.3 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF2357 PF09823.9 NODE_33984_length_638_cov_5.097844_g27120_i0reverse_frame_2 - 0.28 10.4 5.0 0.32 10.2 4.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF2357) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks107.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks107.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks107.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks107.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 17:59:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ALMT PF11744.8 NODE_33966_length_638_cov_97.477612_g27102_i0forward_frame_2 - 0.011 14.6 2.6 0.013 14.4 2.6 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Cdd1 PF11731.8 NODE_33966_length_638_cov_97.477612_g27102_i0forward_frame_2 - 0.15 12.3 0.0 0.32 11.2 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus PPR_2 PF13041.6 NODE_33963_length_638_cov_107.557214_g27099_i0forward_frame_2 - 0.076 13.2 0.1 1.5 9.1 0.1 2.2 1 1 1 2 2 2 0 PPR repeat family Herpes_UL16 PF03044.14 NODE_33955_length_638_cov_169.587065_g27091_i0forward_frame_2 - 0.27 10.5 3.5 0.4 9.9 3.5 1.2 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family zf-RanBP PF00641.18 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 6.8e-12 44.5 19.3 6.8e-07 28.5 2.0 3.1 3 0 0 3 3 3 2 Zn-finger in Ran binding protein and others zf-AN1 PF01428.16 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 6.9e-09 35.7 5.2 6.9e-09 35.7 5.2 3.5 3 0 0 3 3 3 1 AN1-like Zinc finger DZR PF12773.7 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 0.0033 17.4 8.6 0.0033 17.4 8.6 3.3 2 1 1 3 3 3 2 Double zinc ribbon Transp_Tc5_C PF04236.15 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 0.0068 16.7 3.8 0.0068 16.7 3.8 2.7 4 1 0 4 4 4 1 Tc5 transposase C-terminal domain IBR PF01485.21 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 0.036 14.3 4.6 0.036 14.3 4.6 3.3 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain zinc_ribbon_2 PF13240.6 NODE_33952_length_638_cov_185.555556_g27088_i0reverse_frame_3 - 0.32 10.8 11.6 1.1 9.0 0.8 3.6 3 0 0 3 3 3 0 zinc-ribbon domain zf-CGNR PF11706.8 NODE_33928_length_639_cov_2.627483_g27066_i0reverse_frame_3 - 0.018 14.9 0.2 0.073 12.9 0.2 2.1 1 0 0 1 1 1 0 CGNR zinc finger E2 PF08199.11 NODE_33927_length_639_cov_3.000000_g27065_i0forward_frame_3 - 0.00041 20.2 0.6 0.00095 19.1 0.6 1.6 1 0 0 1 1 1 1 Bacteriophage E2-like protein Peptidase_S64 PF08192.11 NODE_33927_length_639_cov_3.000000_g27065_i0forward_frame_2 - 0.00021 19.9 8.6 0.00025 19.7 8.6 1.0 1 0 0 1 1 1 1 Peptidase family S64 TetR_C_30 PF17939.1 NODE_33924_length_639_cov_4.647351_g27062_i0reverse_frame_2 - 0.17 12.1 0.0 0.27 11.5 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF4577 PF15145.6 NODE_33910_length_639_cov_108.524834_g27050_i0reverse_frame_2 - 0.61 10.1 0.0 0.61 10.1 0.0 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4577) Oxysterol_BP PF01237.18 ORF9674 - 0.00013 21.0 0.2 0.0017 17.3 0.1 1.7 1 1 1 2 2 2 2 Oxysterol-binding protein Piwi PF02171.17 ORF92274 - 1.3e-38 133.0 0.0 1.5e-38 132.8 0.0 1.0 1 0 0 1 1 1 1 Piwi domain Methyltransf_11 PF08241.12 ORF92139 - 3.6e-17 62.8 0.0 5.3e-17 62.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF92139 - 2e-16 60.5 0.0 4e-16 59.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF92139 - 1.2e-13 51.1 0.0 1.4e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF92139 - 5.9e-11 42.5 0.0 7.7e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF92139 - 1.5e-08 35.3 0.0 2.3e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF92139 - 1.1e-05 24.9 0.0 2e-05 24.0 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family TPMT PF05724.11 ORF92139 - 0.0017 18.1 0.0 0.0026 17.4 0.0 1.3 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) TehB PF03848.14 ORF92139 - 0.0092 15.4 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 ORF92139 - 0.013 15.0 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF92139 - 0.057 13.4 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 ORF92139 - 0.059 12.7 0.0 0.078 12.2 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MetW PF07021.12 ORF92139 - 0.12 12.0 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Formyl_trans_N PF00551.19 ORF88626 - 2.6e-68 229.3 0.0 3e-68 229.1 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase DUF4446 PF14584.6 ORF88142 - 0.55 10.2 4.1 0.29 11.1 0.7 2.0 1 1 2 3 3 3 0 Protein of unknown function (DUF4446) His_Me_b4a2 PF18275.1 ORF88099 - 0.029 14.4 3.1 1.3 9.1 0.1 3.2 3 0 0 3 3 3 0 His-Me finger endonuclease beta4-alpha2 domain ABC_tran PF00005.27 ORF87682 - 1.8e-26 93.3 0.1 2.5e-26 92.8 0.1 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF87682 - 8.7e-09 35.1 2.1 3.2e-07 30.0 0.8 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF87682 - 0.00079 19.5 0.4 0.0017 18.5 0.4 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA PF00004.29 ORF87682 - 0.0027 18.1 1.1 0.19 12.1 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 ORF87682 - 0.013 14.8 0.4 0.05 12.9 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin RNA_helicase PF00910.22 ORF87682 - 0.018 15.5 0.1 0.25 11.8 0.0 2.3 2 0 0 2 2 2 0 RNA helicase AAA_18 PF13238.6 ORF87682 - 0.034 14.7 0.9 0.082 13.5 0.9 1.9 1 1 0 1 1 1 0 AAA domain FKBP_N_2 PF18023.1 ORF87682 - 0.037 14.1 0.4 0.073 13.2 0.4 1.6 1 0 0 1 1 1 0 BDBT FKBP like N-terminal ATP_bind_1 PF03029.17 ORF87682 - 0.042 13.6 0.4 0.11 12.3 0.1 1.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein DUF87 PF01935.17 ORF87682 - 0.048 13.7 0.8 0.13 12.3 0.1 1.9 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_30 PF13604.6 ORF87682 - 0.059 13.1 0.1 0.19 11.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF87682 - 0.064 13.0 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain CbiA PF01656.23 ORF87682 - 0.069 13.2 0.1 0.11 12.6 0.1 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DDRGK PF09756.9 ORF87682 - 0.082 12.5 1.0 0.12 12.0 1.0 1.2 1 0 0 1 1 1 0 DDRGK domain NB-ARC PF00931.22 ORF87682 - 0.12 11.5 1.4 4 6.5 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain AAA_22 PF13401.6 ORF87682 - 0.14 12.4 0.8 0.46 10.8 0.8 2.0 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF87682 - 0.16 11.6 3.2 4 7.1 0.1 2.6 2 1 1 3 3 3 0 IstB-like ATP binding protein NTPase_1 PF03266.15 ORF87682 - 0.54 10.2 3.8 0.9 9.4 0.2 2.3 2 1 0 2 2 2 0 NTPase Ependymin PF00811.18 ORF86298 - 0.014 15.6 0.0 0.026 14.8 0.0 1.6 1 0 0 1 1 1 0 Ependymin NCBP3 PF10309.9 ORF86298 - 0.15 11.9 1.7 2 8.4 0.1 2.4 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 DUF3150 PF11348.8 ORF86298 - 0.17 11.1 0.0 0.27 10.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) Herpes_UL32 PF06070.11 ORF82488 - 0.22 9.2 2.4 0.27 9.0 2.4 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 DUF2254 PF10011.9 ORF81092 - 0.00078 18.4 0.0 0.001 18.0 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) V_ATPase_I PF01496.19 ORF81092 - 0.0088 14.0 0.0 0.011 13.7 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family MAP17 PF15807.5 ORF81092 - 0.014 15.6 0.1 0.025 14.8 0.0 1.5 2 0 0 2 2 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF2593 PF10767.9 ORF81092 - 0.024 14.7 3.3 0.041 13.9 3.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2593) DUF4834 PF16118.5 ORF81092 - 0.056 14.4 0.7 0.16 12.9 0.0 2.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) CobD_Cbib PF03186.13 ORF81092 - 0.057 12.6 0.6 0.076 12.2 0.6 1.1 1 0 0 1 1 1 0 CobD/Cbib protein OAD_gamma PF04277.13 ORF81092 - 0.071 13.7 0.0 6.5 7.4 0.0 2.6 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain TRAP_alpha PF03896.16 ORF81092 - 0.075 12.2 2.6 0.12 11.6 0.8 1.9 2 0 0 2 2 2 0 Translocon-associated protein (TRAP), alpha subunit LptF_LptG PF03739.14 ORF81092 - 0.11 11.3 3.3 0.18 10.6 3.3 1.2 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Cwf_Cwc_15 PF04889.12 ORF81092 - 0.16 11.7 8.7 0.2 11.3 8.7 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Baculo_11_kDa PF06143.11 ORF81092 - 1.6 8.3 5.7 1.8 8.2 0.2 2.8 3 0 0 3 3 3 0 Baculovirus 11 kDa family CCSMST1 PF15013.6 ORF81092 - 4.9 7.4 6.4 0.78 9.9 1.3 2.2 2 0 0 2 2 2 0 CCSMST1 family FAM176 PF14851.6 ORF81092 - 7.3 6.2 7.6 4.4 6.9 4.9 2.0 2 1 0 2 2 2 0 FAM176 family YabA PF06156.13 ORF81016 - 0.14 12.8 3.9 0.19 12.4 0.3 2.5 2 1 0 2 2 2 0 Initiation control protein YabA Cnn_1N PF07989.11 ORF81016 - 0.16 12.2 3.6 1.2 9.3 0.1 2.6 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 zf-RING_2 PF13639.6 ORF80938 - 4.8e-13 49.2 13.5 4.8e-13 49.2 13.5 2.3 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF80938 - 2.4e-09 37.3 11.0 2.4e-09 37.3 11.0 1.9 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF80938 - 1.3e-08 34.6 14.1 3.6e-08 33.1 14.1 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF80938 - 9e-07 28.9 6.9 2.2e-06 27.6 6.9 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 ORF80938 - 1.2e-06 28.2 9.8 1.2e-06 28.2 9.8 2.5 2 0 0 2 2 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF80938 - 1.3e-06 28.4 10.3 1.3e-06 28.4 10.3 2.0 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF80938 - 2.4e-06 27.4 11.9 2.4e-06 27.4 11.9 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF80938 - 3e-06 27.0 8.4 3e-06 27.0 8.4 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF80938 - 5.2e-06 26.2 14.3 5.2e-06 26.2 14.3 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF80938 - 1.6e-05 24.6 13.5 0.00036 20.3 13.4 2.4 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF80938 - 0.013 15.1 10.7 0.013 15.1 10.7 2.2 2 1 1 3 3 3 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF80938 - 0.12 12.6 13.9 0.085 13.0 10.5 2.5 2 1 0 2 2 2 0 FANCL C-terminal domain zf-Nse PF11789.8 ORF80938 - 0.15 11.9 8.6 0.27 11.1 8.6 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING-like PF08746.11 ORF80938 - 3.2 8.2 16.5 0.98 9.8 12.0 2.4 2 1 1 3 3 2 0 RING-like domain Cupin_8 PF13621.6 ORF80332 - 4.8e-36 124.8 0.0 5.7e-36 124.5 0.0 1.0 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF80332 - 5.2e-06 26.1 0.0 7.4e-05 22.4 0.0 2.0 1 1 0 1 1 1 1 Cupin superfamily protein Cupin_2 PF07883.11 ORF80332 - 0.079 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Cupin domain Cupin_1 PF00190.22 ORF80332 - 0.097 12.3 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Cupin Secretin_N_2 PF07655.13 ORF79750 - 0.065 13.8 6.5 0.15 12.6 6.5 1.6 1 1 0 1 1 1 0 Secretin N-terminal domain PIRT PF15099.6 ORF78810 - 0.014 15.0 3.0 0.014 15.0 3.0 2.8 1 1 2 3 3 3 0 Phosphoinositide-interacting protein family FtsX PF02687.21 ORF78810 - 0.83 10.2 12.9 0.74 10.3 5.7 2.6 2 1 0 2 2 2 0 FtsX-like permease family EMP24_GP25L PF01105.24 ORF71923 - 1.5e-21 77.2 2.8 1.9e-21 76.8 2.8 1.1 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD CM_1 PF07736.11 ORF71923 - 0.11 12.9 0.3 0.97 9.8 0.0 2.1 1 1 1 2 2 2 0 Chorismate mutase type I KH_1 PF00013.29 ORF6991 - 9.6e-05 22.1 0.2 0.0002 21.1 0.2 1.5 1 0 0 1 1 1 1 KH domain KH_8 PF17903.1 ORF6991 - 0.0054 16.8 0.0 0.0096 16.0 0.0 1.4 1 0 0 1 1 1 1 Krr1 KH1 domain KH_4 PF13083.6 ORF6991 - 0.14 12.1 0.1 22 5.0 0.0 2.3 2 0 0 2 2 2 0 KH domain ADK PF00406.22 ORF68972 - 1.2e-44 152.1 0.2 1.5e-44 151.8 0.2 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF68972 - 4.6e-32 111.3 0.4 6.1e-32 110.9 0.4 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF68972 - 3.1e-09 37.5 0.2 4.4e-09 37.0 0.2 1.2 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF68972 - 5.1e-05 23.0 2.8 0.0063 16.2 1.5 2.2 2 0 0 2 2 2 2 Thymidylate kinase AAA_33 PF13671.6 ORF68972 - 0.0001 22.5 0.0 0.00029 21.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain Sigma70_ner PF04546.13 ORF68972 - 0.026 14.4 4.4 0.26 11.1 0.2 2.2 1 1 1 2 2 2 0 Sigma-70, non-essential region AAA_19 PF13245.6 ORF68972 - 0.11 12.8 0.3 0.34 11.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 ORF68972 - 0.16 12.4 1.6 0.57 10.6 1.6 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DHHC PF01529.20 ORF68687 - 6.1e-26 91.1 1.0 8.9e-26 90.6 1.0 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase Vut_1 PF02592.15 ORF68687 - 0.01 16.2 4.2 0.026 14.9 4.2 1.5 1 1 0 1 1 1 0 Putative vitamin uptake transporter GRA6 PF05084.13 ORF68687 - 8.7 6.2 4.9 3.1 7.7 0.3 2.0 2 0 0 2 2 2 0 Granule antigen protein (GRA6) PapD_C PF02753.17 ORF67070 - 4.9e-15 55.6 0.1 2e-14 53.7 0.0 1.9 2 0 0 2 2 2 1 Pili assembly chaperone PapD, C-terminal domain TraD_N PF12615.8 ORF65989 - 0.046 14.5 0.4 0.1 13.4 0.4 1.6 1 0 0 1 1 1 0 F sex factor protein N terminal Thg1C PF14413.6 ORF65989 - 0.75 10.0 8.9 0.092 12.9 3.7 2.0 1 1 1 2 2 2 0 Thg1 C terminal domain CCDC144C PF14915.6 ORF61691 - 0.0057 15.8 6.1 0.01 15.0 6.1 1.5 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region Phage_RpbA PF10789.9 ORF61691 - 0.012 15.7 0.1 0.028 14.5 0.1 1.7 1 1 0 1 1 1 0 Phage RNA polymerase binding, RpbA DivIVA PF05103.13 ORF61691 - 0.29 11.2 5.5 0.33 11.1 4.8 1.5 1 1 0 1 1 1 0 DivIVA protein Herpes_BLRF2 PF05812.12 ORF61691 - 0.45 10.7 6.5 0.28 11.3 4.4 2.0 1 1 1 2 2 2 0 Herpesvirus BLRF2 protein FAM76 PF16046.5 ORF61691 - 1.3 8.4 11.9 0.27 10.5 8.3 1.7 1 1 0 1 1 1 0 FAM76 protein Pkinase PF00069.25 ORF59748 - 3.9e-62 210.0 0.5 4.3e-62 209.9 0.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF59748 - 9.5e-36 123.4 0.0 1e-35 123.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF59748 - 1.8e-11 43.9 0.0 2.3e-11 43.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF59748 - 1.3e-08 34.2 0.4 1.8e-08 33.8 0.4 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF59748 - 9.6e-06 25.1 0.6 2.8e-05 23.5 0.2 2.0 2 1 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF59748 - 0.00022 20.2 0.1 0.00054 18.8 0.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF59748 - 0.0021 17.2 0.7 0.0039 16.3 0.1 1.8 2 0 0 2 2 2 1 Seadornavirus VP7 APH PF01636.23 ORF59748 - 0.025 14.5 0.0 0.096 12.6 0.1 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF59748 - 0.14 11.7 0.1 0.22 11.1 0.1 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Ras PF00071.22 ORF59728 - 2.5e-48 163.7 1.0 2.6e-48 163.7 0.1 1.4 2 0 0 2 2 2 1 Ras family Roc PF08477.13 ORF59728 - 2.3e-29 102.1 0.3 1e-28 100.0 0.0 1.9 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF59728 - 5.4e-11 42.3 0.1 6.8e-11 41.9 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF59728 - 4.3e-05 23.1 0.6 9.7e-05 22.0 0.1 1.7 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF59728 - 0.00062 19.8 0.1 0.0014 18.7 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 ORF59728 - 0.004 17.4 0.4 0.011 15.9 0.0 1.9 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 ORF59728 - 0.031 14.2 0.2 7.1 6.5 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase AAA_7 PF12775.7 ORF59728 - 0.046 13.2 0.0 0.081 12.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region PduV-EutP PF10662.9 ORF59728 - 0.067 12.9 0.4 0.41 10.4 0.0 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.6 ORF59728 - 0.085 13.2 0.0 0.11 12.8 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 ORF59728 - 0.089 12.4 0.2 8.5 5.9 0.0 2.3 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 ORF59728 - 0.12 11.6 1.2 4.1 6.7 0.1 2.2 2 0 0 2 2 2 0 KaiC ABC_tran PF00005.27 ORF59728 - 2.2 8.8 4.0 22 5.6 4.0 2.2 1 1 0 1 1 1 0 ABC transporter Carla_C4 PF01623.17 ORF5819 - 0.029 14.3 0.9 0.054 13.5 0.9 1.4 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein zf_UBZ PF18439.1 ORF56323 - 0.049 13.2 0.5 0.049 13.2 0.5 3.1 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-WRNIP1_ubi PF18279.1 ORF56323 - 0.14 12.8 2.2 43 5.1 0.1 3.4 3 0 0 3 3 3 0 Werner helicase-interacting protein 1 ubiquitin-binding domain zf-MYND PF01753.18 ORF56323 - 0.44 10.7 7.2 17 5.6 1.6 3.5 3 1 0 3 3 3 0 MYND finger Prok-RING_4 PF14447.6 ORF56323 - 0.82 9.6 13.7 0.94 9.4 0.9 3.6 4 0 0 4 4 4 0 Prokaryotic RING finger family 4 zf-ribbon_3 PF13248.6 ORF56323 - 3.8 7.0 11.9 1.7 8.2 0.1 3.6 4 0 0 4 4 4 0 zinc-ribbon domain zf-TRAF PF02176.18 ORF56323 - 7.2 7.4 11.7 0.074 13.7 3.2 2.2 2 1 1 3 3 3 0 TRAF-type zinc finger SRP_SPB PF02978.19 ORF5243 - 0.0018 18.8 0.4 0.0038 17.8 0.4 1.5 1 0 0 1 1 1 1 Signal peptide binding domain Rab5-bind PF09311.11 ORF5243 - 0.0032 16.9 0.7 0.54 9.6 0.0 2.1 1 1 0 2 2 2 2 Rabaptin-like protein Spike_torovirin PF17072.5 ORF52246 - 0.41 7.7 0.6 0.46 7.6 0.6 1.0 1 0 0 1 1 1 0 Torovirinae spike glycoprotein TolA_bind_tri PF16331.5 ORF52246 - 3.7 7.7 10.2 1.9 8.6 7.1 2.2 2 1 0 2 2 2 0 TolA binding protein trimerisation Octopine_DH PF02317.17 ORF50804 - 2.4e-24 86.1 0.0 3.1e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Ribosomal_S3_C PF00189.20 ORF50804 - 0.16 12.5 0.0 0.28 11.7 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain YabA PF06156.13 ORF50552 - 0.14 12.8 3.9 0.19 12.4 0.3 2.5 2 1 0 2 2 2 0 Initiation control protein YabA Cnn_1N PF07989.11 ORF50552 - 0.16 12.2 3.6 1.2 9.3 0.1 2.6 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 His_Me_b4a2 PF18275.1 ORF50013 - 0.029 14.5 3.1 1.3 9.1 0.1 3.2 3 0 0 3 3 3 0 His-Me finger endonuclease beta4-alpha2 domain Dehalogenase PF13486.6 ORF45890 - 0.23 10.8 0.1 0.31 10.4 0.1 1.1 1 0 0 1 1 1 0 Reductive dehalogenase subunit Chloroa_b-bind PF00504.21 ORF44391 - 1.7e-25 90.4 0.8 2.2e-25 90.0 0.8 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein DHHC PF01529.20 ORF41465 - 9.1e-30 103.5 15.9 9.1e-30 103.5 15.9 2.2 2 1 0 2 2 2 1 DHHC palmitoyltransferase DUF2189 PF09955.9 ORF41465 - 0.053 13.8 0.3 0.053 13.8 0.3 2.3 2 1 0 2 2 2 0 Predicted integral membrane protein (DUF2189) zf-ribbon_3 PF13248.6 ORF41465 - 6.1 6.4 8.4 12 5.5 0.3 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Lipase_3 PF01764.25 ORF39470 - 7.9e-13 48.5 0.0 1.5e-12 47.6 0.0 1.5 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF39470 - 2.1e-05 25.3 0.8 2.6e-05 24.9 0.8 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 ORF39470 - 0.0047 16.7 0.0 0.01 15.6 0.0 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF39470 - 0.011 15.8 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Hydrolase_4 PF12146.8 ORF39470 - 0.02 14.2 0.0 0.036 13.3 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 ORF39470 - 0.084 12.7 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Kelch_4 PF13418.6 ORF32947 - 0.13 12.3 0.0 0.34 10.9 0.0 1.7 1 0 0 1 1 1 0 Galactose oxidase, central domain PRMT5_C PF17286.2 ORF3275 - 0.015 15.2 0.1 0.019 14.9 0.1 1.2 1 0 0 1 1 1 0 PRMT5 oligomerisation domain Nodulin_late PF07127.11 ORF31 - 0.32 11.4 3.0 17 5.8 0.4 2.7 2 0 0 2 2 2 0 Late nodulin protein Tcp10_C PF07202.13 ORF30849 - 1.9e-20 73.5 1.6 1.9e-20 73.5 1.6 2.1 2 0 0 2 2 2 1 T-complex protein 10 C-terminus YkuD PF03734.14 ORF30849 - 0.026 14.9 1.0 0.054 13.9 0.1 2.1 2 1 0 2 2 2 0 L,D-transpeptidase catalytic domain SCO1-SenC PF02630.14 ORF29730 - 8.5e-24 84.0 0.0 1.6e-23 83.1 0.0 1.5 1 0 0 1 1 1 1 SCO1/SenC Acetyltransf_11 PF13720.6 ORF29730 - 0.018 15.5 0.0 0.037 14.5 0.0 1.6 1 1 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 YbgS PF13985.6 ORF27101 - 4.9 7.5 9.9 3.8 7.8 8.1 1.8 1 1 1 2 2 2 0 YbgS-like protein DUF5506 PF17611.2 ORF25746 - 0.11 12.4 0.1 0.15 11.9 0.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5506) KH_1 PF00013.29 ORF25629 - 9.6e-05 22.1 0.2 0.0002 21.1 0.2 1.5 1 0 0 1 1 1 1 KH domain KH_8 PF17903.1 ORF25629 - 0.0054 16.8 0.0 0.0096 16.0 0.0 1.4 1 0 0 1 1 1 1 Krr1 KH1 domain KH_4 PF13083.6 ORF25629 - 0.14 12.1 0.1 22 5.0 0.0 2.3 2 0 0 2 2 2 0 KH domain DUF5506 PF17611.2 ORF25113 - 0.11 12.4 0.1 0.15 11.9 0.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5506) Histone PF00125.24 ORF25022 - 1.3e-06 28.8 1.6 5.3e-06 26.8 1.6 1.9 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 ORF25022 - 0.00062 19.9 0.6 0.0068 16.5 0.0 2.2 1 1 1 2 2 2 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF25022 - 0.0013 19.0 2.5 0.0032 17.7 0.2 2.5 3 0 0 3 3 3 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-S PF15630.6 ORF25022 - 0.032 14.6 0.0 0.12 12.8 0.0 1.8 2 0 0 2 2 2 0 CENP-S protein OATP PF03137.20 ORF23278 - 0.0093 14.3 1.7 0.0093 14.3 1.7 1.6 2 0 0 2 2 2 1 Organic Anion Transporter Polypeptide (OATP) family NPR3 PF03666.13 ORF23278 - 0.14 10.9 3.4 0.19 10.5 3.4 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 WW PF00397.26 ORF21740 - 0.39 10.8 3.7 0.72 10.0 0.0 2.8 3 0 0 3 3 3 0 WW domain Sec7_N PF12783.7 ORF18678 - 0.018 14.9 3.1 0.023 14.6 1.1 2.1 1 1 1 2 2 2 0 Guanine nucleotide exchange factor in Golgi transport N-terminal Carla_C4 PF01623.17 ORF15484 - 0.029 14.3 0.9 0.054 13.5 0.9 1.4 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein PUL PF08324.11 ORF150449 - 0.021 14.0 0.1 0.038 13.2 0.1 1.4 1 0 0 1 1 1 0 PUL domain Prominin PF05478.11 ORF150449 - 0.47 8.4 10.0 0.59 8.0 10.0 1.1 1 0 0 1 1 1 0 Prominin Exonuc_VII_L PF02601.15 ORF150449 - 0.63 9.5 11.1 0.82 9.2 11.1 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4407 PF14362.6 ORF150449 - 0.75 9.1 6.2 0.92 8.8 6.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AAA_11 PF13086.6 ORF150449 - 0.93 9.2 13.8 1.2 8.9 13.8 1.3 1 0 0 1 1 1 0 AAA domain UPF0242 PF06785.11 ORF150449 - 0.96 9.5 17.9 1.3 9.1 17.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus BPL_N PF09825.9 ORF150449 - 1 8.4 6.9 1.1 8.2 6.9 1.3 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal Band_3_cyto PF07565.13 ORF150449 - 1.1 9.0 12.6 1.3 8.8 12.6 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain LtuB PF17455.2 ORF150449 - 1.1 9.9 6.5 0.35 11.5 2.7 2.0 1 1 1 2 2 2 0 Late transcription unit B Fucose_iso_N2 PF07882.12 ORF150449 - 1.9 8.1 7.7 2.8 7.5 7.7 1.3 1 0 0 1 1 1 0 L-fucose isomerase, second N-terminal domain SID-1_RNA_chan PF13965.6 ORF150449 - 2.8 6.3 7.5 3 6.1 7.5 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 ALMT PF11744.8 ORF150449 - 4 6.1 13.2 4.8 5.9 13.2 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Sulfotransfer_2 PF03567.14 ORF149244 - 1.4e-05 25.2 2.5 0.00065 19.7 2.3 2.2 1 1 0 1 1 1 1 Sulfotransferase family DUF1801 PF08818.11 ORF143875 - 0.056 14.0 0.2 0.16 12.5 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DU1801) IF4E PF01652.18 ORF143271 - 2.5e-40 137.9 0.6 3e-40 137.6 0.6 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E ubiquitin PF00240.23 ORF143052 - 4.5e-24 84.0 0.4 1e-23 82.9 0.0 1.7 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF143052 - 3.4e-09 36.4 0.2 1.2e-08 34.6 0.1 2.0 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF143052 - 0.0062 17.0 0.0 0.035 14.5 0.0 2.2 1 1 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF143052 - 0.011 15.8 0.0 0.027 14.6 0.0 1.7 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF143052 - 0.091 13.3 0.0 0.28 11.7 0.0 1.7 2 0 0 2 2 2 0 DUF2407 ubiquitin-like domain Mem_trans PF03547.18 ORF141936 - 2.1e-07 29.7 5.8 2.6e-07 29.4 5.8 1.0 1 0 0 1 1 1 1 Membrane transport protein Peptidase_M10_C PF08548.11 ORF139079 - 2 8.2 9.9 2.9 7.7 5.0 2.1 1 1 1 2 2 2 0 Peptidase M10 serralysin C terminal CSD PF00313.22 ORF136306 - 1.3e-15 57.0 1.5 8.2e-09 35.2 0.1 2.5 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF136306 - 4.8e-05 23.0 1.5 0.14 11.8 0.1 2.7 3 0 0 3 3 3 2 Ribonuclease B OB domain PCI PF01399.27 ORF134682 - 1.7e-08 34.9 0.0 2.8e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 PCI domain Nic96 PF04097.14 ORF134682 - 0.01 14.4 0.2 0.099 11.1 0.0 1.9 2 0 0 2 2 2 1 Nup93/Nic96 DUF3461 PF11944.8 ORF134682 - 0.044 13.9 2.7 0.27 11.4 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3461) Sec8_exocyst PF04048.14 ORF134682 - 0.35 10.8 4.9 1.1 9.2 4.8 1.8 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain Ank_2 PF12796.7 ORF133756 - 2.2e-48 162.8 13.3 4.1e-14 52.9 1.3 2.7 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF133756 - 4.5e-29 100.1 1.3 3.1e-09 36.9 0.0 4.2 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF133756 - 3.2e-24 84.3 1.1 3.2e-05 24.2 0.0 5.5 6 0 0 6 6 6 4 Ankyrin repeat Ank_4 PF13637.6 ORF133756 - 2.6e-20 72.5 0.1 2.3e-08 34.4 0.0 3.5 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF133756 - 1.5e-18 64.9 0.1 0.0015 18.9 0.0 4.9 5 0 0 5 5 5 4 Ankyrin repeat DUF3885 PF13021.6 ORF133756 - 0.16 12.1 0.1 7.8 6.7 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3885) UPF0239 PF06783.11 ORF132367 - 0.2 11.8 2.2 19 5.6 0.1 3.3 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0239) Comm PF15957.5 ORF132367 - 0.35 11.2 0.1 0.35 11.2 0.1 2.3 2 1 2 4 4 4 0 Commissureless DUF2207 PF09972.9 ORF132367 - 0.77 8.4 3.2 1.7 7.3 3.0 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Shisa PF13908.6 ORF132367 - 1.2 9.3 5.8 0.93 9.7 0.1 2.5 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator DUF3810 PF12725.7 ORF132367 - 1.4 8.2 8.6 1.1 8.5 7.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) Troponin-I_N PF11636.8 ORF131233 - 0.02 14.8 5.4 0.039 13.9 3.9 2.4 2 0 0 2 2 2 0 Troponin I residues 1-32 DUF2935 PF11155.8 ORF128023 - 0.00028 21.2 0.6 0.0024 18.2 0.2 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF2935) DUF745 PF05335.13 ORF128023 - 0.068 12.9 4.0 0.11 12.2 4.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF745) V-ATPase_H_C PF11698.8 ORF128023 - 0.13 12.4 1.2 0.24 11.5 0.2 2.0 2 1 1 3 3 3 0 V-ATPase subunit H Exonuc_VII_L PF02601.15 ORF128023 - 2.1 7.8 7.7 3.2 7.2 7.6 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit KapB PF08810.10 ORF128023 - 4.8 7.4 6.1 17 5.6 0.3 3.1 2 1 1 3 3 3 0 Kinase associated protein B Ycf4 PF02392.16 ORF126559 - 3.6e-26 91.8 0.1 4.7e-26 91.4 0.1 1.1 1 0 0 1 1 1 1 Ycf4 GST_N PF02798.20 ORF124079 - 1e-22 80.3 0.0 6.1e-20 71.4 0.0 2.2 2 0 0 2 2 2 2 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF124079 - 8.2e-17 61.4 0.0 1.6e-16 60.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF124079 - 1.2e-13 51.0 0.0 1.8e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF124079 - 3e-13 49.8 0.1 6.3e-13 48.8 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF124079 - 6.4e-08 32.5 0.0 1.2e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF124079 - 0.02 15.5 0.0 0.047 14.3 0.0 1.6 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF124079 - 0.021 15.0 0.0 0.046 13.9 0.0 1.6 1 0 0 1 1 1 0 Glutaredoxin GST_C_6 PF17171.4 ORF124079 - 0.096 12.5 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain COX14 PF14880.6 ORF123057 - 0.012 15.4 0.0 0.025 14.4 0.0 1.5 1 0 0 1 1 1 0 Cytochrome oxidase c assembly EMP24_GP25L PF01105.24 ORF122576 - 3.4e-21 76.0 1.1 4.2e-21 75.7 1.1 1.1 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD DUF2569 PF10754.9 ORF122576 - 0.034 14.6 0.4 0.095 13.1 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2569) Snapin_Pallidin PF14712.6 ORF122576 - 0.062 13.7 0.7 0.11 12.9 0.7 1.4 1 0 0 1 1 1 0 Snapin/Pallidin BRE1 PF08647.11 ORF122576 - 0.085 12.9 2.4 0.13 12.4 2.4 1.3 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase DUF4140 PF13600.6 ORF122576 - 0.13 12.7 0.2 0.23 11.9 0.2 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Orf78 PF06024.12 ORF122576 - 6.9 7.0 7.5 0.53 10.6 2.2 1.9 2 1 0 2 2 2 0 Orf78 (ac78) HATPase_c PF02518.26 ORF120311 - 1.7e-21 76.8 0.1 2.3e-21 76.4 0.1 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF120311 - 0.0018 18.1 0.1 0.003 17.4 0.1 1.5 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Glyco_transf_6 PF03414.13 ORF120311 - 0.013 14.3 0.1 0.02 13.7 0.1 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 6 HATPase_c_5 PF14501.6 ORF120311 - 0.1 12.5 0.9 0.31 10.9 0.9 1.9 1 1 0 1 1 1 0 GHKL domain Arteri_nucleo PF01481.16 ORF120311 - 0.15 12.4 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 Arterivirus nucleocapsid protein DUF1190 PF06693.11 ORF116549 - 8.5e-20 71.8 2.4 1.6e-19 70.8 2.4 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1190) Chloroa_b-bind PF00504.21 ORF115726 - 1.7e-25 90.4 0.8 2.2e-25 90.0 0.8 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein PolC_DP2 PF03833.13 ORF115232 - 0.15 9.9 0.0 0.19 9.5 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 ABC_tran PF00005.27 ORF109983 - 1.7e-26 93.4 0.1 2.3e-26 92.9 0.1 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF109983 - 3.2e-09 36.6 0.7 2.2e-07 30.6 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF109983 - 0.00085 19.4 0.4 0.0018 18.3 0.4 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA PF00004.29 ORF109983 - 0.002 18.5 0.8 0.18 12.2 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 ORF109983 - 0.013 14.8 0.4 0.05 12.9 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin RNA_helicase PF00910.22 ORF109983 - 0.018 15.4 0.1 0.26 11.7 0.0 2.3 2 0 0 2 2 2 0 RNA helicase FKBP_N_2 PF18023.1 ORF109983 - 0.034 14.2 0.4 0.069 13.3 0.4 1.6 1 0 0 1 1 1 0 BDBT FKBP like N-terminal AAA_18 PF13238.6 ORF109983 - 0.039 14.5 0.8 0.097 13.2 0.8 1.9 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF109983 - 0.042 13.6 0.4 0.11 12.3 0.1 1.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein DUF87 PF01935.17 ORF109983 - 0.048 13.8 0.7 0.13 12.3 0.1 1.9 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_30 PF13604.6 ORF109983 - 0.061 13.0 0.1 0.21 11.3 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF109983 - 0.064 13.0 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain DDRGK PF09756.9 ORF109983 - 0.082 12.5 1.0 0.12 12.0 1.0 1.2 1 0 0 1 1 1 0 DDRGK domain NB-ARC PF00931.22 ORF109983 - 0.083 12.1 0.9 4 6.5 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain CbiA PF01656.23 ORF109983 - 0.087 12.9 0.1 0.14 12.2 0.1 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 ORF109983 - 0.16 12.3 1.0 0.52 10.6 1.0 2.0 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF109983 - 0.24 11.1 3.7 3.7 7.3 0.2 2.5 1 1 2 3 3 3 0 IstB-like ATP binding protein NTPase_1 PF03266.15 ORF109983 - 0.56 10.1 3.7 0.91 9.4 0.1 2.3 2 1 0 2 2 2 0 NTPase Aldolase_II PF00596.21 ORF10985 - 1.6e-44 152.1 0.0 1.8e-44 151.9 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Kelch_4 PF13418.6 ORF109354 - 3e-08 33.5 0.0 2.7e-05 24.1 0.0 2.3 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF109354 - 6.3e-05 22.5 0.0 0.33 10.6 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF109354 - 0.0053 17.0 0.0 1.6 9.1 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Adaptin_binding PF10199.9 ORF109354 - 0.0092 16.6 3.4 0.012 16.2 3.4 1.3 1 0 0 1 1 1 1 Alpha and gamma adaptin binding protein p34 Kelch_5 PF13854.6 ORF109354 - 0.071 13.1 0.0 9.5 6.3 0.0 2.3 2 0 0 2 2 2 0 Kelch motif Chloroa_b-bind PF00504.21 ORF108170 - 1.7e-25 90.4 0.8 2.2e-25 90.0 0.8 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Histone PF00125.24 ORF107944 - 1.3e-06 28.8 1.6 5.3e-06 26.8 1.6 1.9 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 ORF107944 - 0.00062 19.9 0.6 0.0068 16.5 0.0 2.2 1 1 1 2 2 2 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF107944 - 0.0013 19.0 2.5 0.0032 17.7 0.2 2.5 3 0 0 3 3 3 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-S PF15630.6 ORF107944 - 0.032 14.6 0.0 0.12 12.8 0.0 1.8 2 0 0 2 2 2 0 CENP-S protein Phytochelatin PF05023.14 ORF106382 - 0.065 12.4 0.0 0.095 11.9 0.0 1.2 1 0 0 1 1 1 0 Phytochelatin synthase EVC2_like PF12297.8 ORF101429 - 0.45 9.2 1.2 0.76 8.4 0.2 1.7 2 0 0 2 2 2 0 Ellis van Creveld protein 2 like protein rpo132 PF12415.8 NODE_34327_length_631_cov_4.260067_g27414_i0reverse_frame_1 - 0.11 11.8 0.1 0.23 10.8 0.1 1.4 1 0 0 1 1 1 0 Poxvirus DNA dependent RNA polymerase Mon2_C PF16206.5 NODE_34282_length_632_cov_2.587940_g27374_i0reverse_frame_1 - 0.16 10.1 1.6 0.19 9.9 1.6 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein DUF1589 PF07628.11 NODE_34258_length_632_cov_192.045226_g27352_i0forward_frame_1 - 0.018 15.2 0.7 0.039 14.1 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1589) TT_ORF1 PF02956.14 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_1 - 4 6.0 17.5 4.5 5.8 17.5 1.1 1 0 0 1 1 1 0 TT viral orf 1 Glyoxal_oxid_N PF07250.11 NODE_34180_length_634_cov_3.958264_g27287_i0reverse_frame_3 - 0.075 12.2 1.7 0.12 11.5 1.7 1.4 1 1 0 1 1 1 0 Glyoxal oxidase N-terminus WW_FCH_linker PF16623.5 NODE_34180_length_634_cov_3.958264_g27287_i0forward_frame_2 - 0.095 13.5 0.1 0.22 12.3 0.1 1.6 1 1 0 1 1 1 0 Unstructured linker region between on GAS7 protein Ribonuc_L-PSP PF01042.21 NODE_34173_length_634_cov_76.868114_g27282_i0reverse_frame_2 - 0.029 14.4 0.0 0.057 13.4 0.0 1.5 1 0 0 1 1 1 0 Endoribonuclease L-PSP Toxin_28 PF08115.11 NODE_34171_length_634_cov_78.447412_g26768_i1reverse_frame_3 - 0.15 12.0 0.3 0.28 11.1 0.3 1.4 1 0 0 1 1 1 0 SFI toxin family R3H-assoc PF13902.6 NODE_34171_length_634_cov_78.447412_g26768_i1reverse_frame_2 - 0.0039 17.6 1.2 0.0089 16.4 1.2 1.7 1 0 0 1 1 1 1 R3H-associated N-terminal domain Striatin PF08232.12 NODE_34171_length_634_cov_78.447412_g26768_i1reverse_frame_2 - 0.34 11.5 0.1 0.34 11.5 0.1 2.6 2 1 0 2 2 2 0 Striatin family Methyltransf_23 PF13489.6 NODE_34167_length_634_cov_92.834725_g27277_i0reverse_frame_2 - 0.00025 20.9 0.0 0.00036 20.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_34167_length_634_cov_92.834725_g27277_i0reverse_frame_2 - 0.0031 18.1 0.0 0.0058 17.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_34167_length_634_cov_92.834725_g27277_i0reverse_frame_2 - 0.005 17.6 0.0 0.0073 17.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_34167_length_634_cov_92.834725_g27277_i0reverse_frame_2 - 0.0074 16.1 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DUF3795 PF12675.7 NODE_34153_length_634_cov_248.801336_g27264_i0reverse_frame_2 - 0.62 10.5 5.7 1.2 9.6 5.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3795) RRM_1 PF00076.22 NODE_34148_length_634_cov_265.888147_g27259_i0reverse_frame_3 - 4.9e-12 45.5 0.0 8.6e-12 44.7 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_34148_length_634_cov_265.888147_g27259_i0reverse_frame_3 - 0.084 13.0 0.0 0.28 11.3 0.0 1.7 1 1 0 1 1 1 0 RNA recognition motif RRM_occluded PF16842.5 NODE_34148_length_634_cov_265.888147_g27259_i0reverse_frame_3 - 0.094 12.6 0.0 0.28 11.1 0.0 1.9 1 1 0 1 1 1 0 Occluded RNA-recognition motif 7tm_3 PF00003.22 NODE_34148_length_634_cov_265.888147_g27259_i0forward_frame_3 - 0.1 12.3 2.3 0.14 11.9 2.3 1.2 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR TPR_MLP1_2 PF07926.12 NODE_34146_length_634_cov_270.626043_g27257_i0reverse_frame_3 - 0.0031 17.6 6.0 0.0049 16.9 6.0 1.2 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein PspA_IM30 PF04012.12 NODE_34146_length_634_cov_270.626043_g27257_i0reverse_frame_3 - 0.015 14.9 8.4 0.021 14.4 8.4 1.2 1 0 0 1 1 1 0 PspA/IM30 family Exonuc_VII_L PF02601.15 NODE_34146_length_634_cov_270.626043_g27257_i0reverse_frame_3 - 0.025 14.2 0.7 0.032 13.8 0.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Phage_tail_S PF05069.13 NODE_34146_length_634_cov_270.626043_g27257_i0reverse_frame_2 - 0.17 11.7 4.6 11 5.8 0.5 3.1 2 1 0 3 3 3 0 Phage virion morphogenesis family TTL PF03133.15 NODE_34123_length_635_cov_3.551667_g27239_i0reverse_frame_3 - 2.7e-23 82.6 2.0 2.7e-23 82.6 2.0 1.5 1 1 1 2 2 2 1 Tubulin-tyrosine ligase family RE_BsaWI PF18643.1 NODE_34123_length_635_cov_3.551667_g27239_i0reverse_frame_3 - 0.028 14.3 0.4 0.056 13.4 0.4 1.6 1 0 0 1 1 1 0 BsaWI restriction endonuclease type 2 DUF3981 PF13139.6 NODE_34123_length_635_cov_3.551667_g27239_i0forward_frame_2 - 0.052 13.9 0.9 0.14 12.6 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3981) Self-incomp_S1 PF05938.11 NODE_34120_length_635_cov_6.126667_g27236_i0forward_frame_3 - 0.031 14.8 0.3 0.058 13.9 0.3 1.4 1 0 0 1 1 1 0 Plant self-incompatibility protein S1 Glyco_hydro_31 PF01055.26 NODE_34114_length_635_cov_84.090000_g27230_i0forward_frame_3 - 1.2e-30 107.1 0.1 1.6e-30 106.7 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 NODE_34114_length_635_cov_84.090000_g27230_i0forward_frame_3 - 2.3e-05 24.6 0.7 4.8e-05 23.6 0.7 1.5 1 0 0 1 1 1 1 Galactose mutarotase-like PGC7_Stella PF15549.6 NODE_34093_length_635_cov_236.383333_g27210_i0reverse_frame_3 - 3.5 7.6 11.1 1.2 9.1 8.4 1.6 2 0 0 2 2 2 0 PGC7/Stella/Dppa3 domain Rnk_N PF14760.6 NODE_34079_length_636_cov_2.484193_g27197_i0reverse_frame_2 - 6.6e-10 39.3 2.3 9.9e-10 38.7 2.3 1.2 1 0 0 1 1 1 1 Rnk N-terminus GreA_GreB PF01272.19 NODE_34079_length_636_cov_2.484193_g27197_i0reverse_frame_2 - 0.00019 21.3 0.0 0.00031 20.6 0.0 1.3 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term ERGIC_N PF13850.6 NODE_34077_length_636_cov_3.078203_g27195_i0forward_frame_3 - 0.023 15.0 0.2 0.046 14.1 0.2 1.6 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Imm17 PF15562.6 NODE_34077_length_636_cov_3.078203_g27195_i0forward_frame_3 - 0.046 13.6 0.1 0.083 12.8 0.1 1.4 1 0 0 1 1 1 0 Immunity protein 17 FIT1_2 PF17357.2 NODE_34077_length_636_cov_3.078203_g27195_i0forward_frame_3 - 0.12 12.5 0.6 0.27 11.4 0.6 1.5 1 0 0 1 1 1 0 Facilitor Of iron transport 1 and 2 PPV_E1_N PF00524.18 NODE_34068_length_636_cov_97.529118_g27187_i0forward_frame_3 - 0.05 14.0 0.2 0.21 12.0 0.1 2.0 2 0 0 2 2 2 0 E1 Protein, N terminal domain Thymidylate_kin PF02223.17 NODE_34068_length_636_cov_97.529118_g27187_i0forward_frame_3 - 0.13 11.9 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 Thymidylate kinase RINT1_TIP1 PF04437.13 NODE_34068_length_636_cov_97.529118_g27187_i0forward_frame_3 - 0.14 11.0 0.3 0.18 10.7 0.3 1.1 1 0 0 1 1 1 0 RINT-1 / TIP-1 family IQ PF00612.27 NODE_34058_length_636_cov_191.765391_g27179_i0reverse_frame_3 - 4.8 7.3 6.2 10 6.2 0.6 2.9 2 0 0 2 2 2 0 IQ calmodulin-binding motif LmjF365940-deam PF14421.6 NODE_34058_length_636_cov_191.765391_g27179_i0reverse_frame_2 - 0.03 13.9 0.3 0.051 13.2 0.2 1.4 2 0 0 2 2 2 0 A distinct subfamily of CDD/CDA-like deaminases Ank_2 PF12796.7 ORF9469 - 1.5e-07 31.9 0.1 0.022 15.3 0.0 2.6 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF9469 - 2.3e-05 24.6 0.2 0.47 11.0 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF9469 - 5.6e-05 23.2 0.6 5.4 7.9 0.0 4.3 3 1 1 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF9469 - 0.00068 19.9 0.9 0.058 13.7 0.1 2.8 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF9469 - 0.0032 18.0 0.2 2.3 8.9 0.0 2.7 2 1 0 2 2 2 2 Ankyrin repeats (many copies) MurB_C PF02873.16 ORF9469 - 0.13 12.3 0.0 5.2 7.1 0.0 2.1 2 0 0 2 2 2 0 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Vma12 PF11712.8 ORF9084 - 0.26 11.3 2.6 0.28 11.3 0.1 2.1 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase RabGAP-TBC PF00566.18 ORF86612 - 1.1e-17 64.5 6.8 1.1e-17 64.5 6.8 2.0 2 1 0 2 2 2 1 Rab-GTPase-TBC domain Peptidase_S78 PF04586.17 ORF86612 - 0.058 13.6 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 Caudovirus prohead serine protease 7TMR-DISM_7TM PF07695.11 ORF86612 - 0.13 12.2 2.8 0.17 11.8 2.8 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling Tetraspanin PF00335.20 ORF8569 - 0.15 11.8 19.8 0.0089 15.8 14.8 1.6 1 1 1 2 2 2 0 Tetraspanin family SUR7 PF06687.12 ORF8569 - 0.86 9.2 22.6 1.1e+02 2.4 22.6 2.1 1 1 0 1 1 1 0 SUR7/PalI family DUF3784 PF12650.7 ORF8569 - 0.95 9.7 16.9 2.9 8.2 1.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) Leuk-A4-hydro_C PF09127.11 ORF84144 - 3.5e-26 91.5 0.0 6.5e-26 90.6 0.0 1.4 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal DUF2182 PF09948.9 ORF82311 - 2.4 8.0 4.4 4.1 7.2 4.4 1.4 1 0 0 1 1 1 0 Predicted metal-binding integral membrane protein (DUF2182) zf-RING_2 PF13639.6 ORF81850 - 1.3e-13 51.0 7.4 2.3e-13 50.2 7.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF81850 - 2.6e-10 39.9 7.2 4.6e-10 39.2 7.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF81850 - 2.3e-09 37.0 7.6 4.3e-09 36.1 7.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF81850 - 4.2e-09 36.0 3.8 8.9e-09 34.9 3.8 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF81850 - 4.1e-08 33.4 8.3 1.4e-07 31.7 8.3 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF81850 - 3.5e-07 30.0 4.3 5.8e-07 29.3 4.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF81850 - 3.6e-07 30.1 5.1 7.2e-07 29.1 5.1 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF81850 - 3.2e-06 27.0 5.7 5.8e-06 26.2 5.7 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF81850 - 1.6e-05 24.9 1.7 3.3e-05 23.8 1.7 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF81850 - 2.6e-05 23.7 4.0 4.5e-05 23.0 4.0 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF81850 - 5.1e-05 23.3 8.0 0.00011 22.3 8.0 1.6 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 ORF81850 - 0.042 14.0 3.0 0.13 12.5 3.0 1.8 1 0 0 1 1 1 0 FANCL C-terminal domain PAGK PF15284.6 ORF81850 - 0.047 13.6 0.1 0.095 12.6 0.1 1.5 1 0 0 1 1 1 0 Phage-encoded virulence factor Zf_RING PF16744.5 ORF81850 - 0.049 13.8 1.7 0.11 12.6 1.7 1.6 1 0 0 1 1 1 0 KIAA1045 RING finger PHD PF00628.29 ORF81850 - 0.15 11.9 4.3 0.37 10.7 4.3 1.7 1 0 0 1 1 1 0 PHD-finger Prok-RING_4 PF14447.6 ORF81850 - 0.21 11.5 8.3 2.9 7.8 8.5 2.3 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF81850 - 0.23 11.3 7.0 0.49 10.2 6.6 1.8 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 ORF81850 - 0.25 11.7 7.6 0.56 10.6 7.7 1.6 1 1 0 1 1 1 0 RING-like domain Zn-ribbon_8 PF09723.10 ORF81850 - 0.25 11.5 3.9 12 6.1 1.4 2.5 2 0 0 2 2 2 0 Zinc ribbon domain zf-Nse PF11789.8 ORF81850 - 0.42 10.5 4.2 0.91 9.4 4.2 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit PIN_12 PF16289.5 ORF81850 - 1.1 9.7 11.7 0.46 11.0 6.3 2.0 1 1 1 2 2 2 0 PIN domain CorA PF01544.18 ORF81850 - 1.3 8.3 5.5 2 7.7 5.5 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein CemA PF03040.14 ORF81850 - 2 8.3 5.1 2.1 8.2 3.7 1.6 1 1 0 1 1 1 0 CemA family zf-RING_10 PF16685.5 ORF81850 - 2.2 8.5 8.0 0.55 10.4 4.6 1.8 2 0 0 2 2 1 0 zinc RING finger of MSL2 RINGv PF12906.7 ORF81850 - 3.5 7.8 7.1 0.87 9.8 3.4 2.0 2 1 0 2 2 1 0 RING-variant domain Chitin_synth_1 PF01644.17 ORF81447 - 0.00074 19.5 0.0 0.0011 19.0 0.0 1.5 1 1 0 1 1 1 1 Chitin synthase Glycos_transf_2 PF00535.26 ORF81447 - 0.023 14.5 0.3 0.66 9.8 0.0 2.6 2 1 1 3 3 3 0 Glycosyl transferase family 2 Tsi6 PF18660.1 ORF81447 - 0.041 13.9 0.0 0.086 12.9 0.0 1.5 1 0 0 1 1 1 0 Tsi6 Mito_carr PF00153.27 ORF79930 - 2.2e-36 123.6 0.2 1.3e-18 66.6 0.0 2.1 1 1 1 2 2 2 2 Mitochondrial carrier protein Gpi16 PF04113.14 ORF77132 - 0.038 12.5 0.3 0.94 7.9 0.1 2.0 1 1 1 2 2 2 0 Gpi16 subunit, GPI transamidase component ETC_C1_NDUFA5 PF04716.14 ORF76934 - 3.8e-17 61.8 0.1 6.8e-17 61.0 0.1 1.4 1 0 0 1 1 1 1 ETC complex I subunit conserved region ubiquitin PF00240.23 ORF76347 - 1.6e-06 27.8 0.8 2.2e-06 27.3 0.8 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF76347 - 4.8e-05 23.1 0.5 7.9e-05 22.4 0.5 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407_C PF13373.6 ORF76347 - 0.00018 21.7 0.0 0.00033 20.8 0.0 1.5 1 1 0 1 1 1 1 DUF2407 C-terminal domain Rad60-SLD_2 PF13881.6 ORF76347 - 0.0023 18.0 0.3 0.0044 17.1 0.3 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like SUR7 PF06687.12 ORF76347 - 0.039 13.6 0.1 0.05 13.2 0.1 1.3 1 0 0 1 1 1 0 SUR7/PalI family Glyoxalase PF00903.25 ORF75921 - 2.1e-10 40.9 0.0 3.7e-10 40.1 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 ORF75921 - 1.3e-06 29.1 0.0 2.5e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.6 ORF75921 - 1.6e-05 25.1 0.0 3.8e-05 23.9 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 ORF75921 - 0.076 13.1 0.2 0.47 10.5 0.1 2.0 1 1 1 2 2 2 0 Glyoxalase-like domain IGF2_C PF08365.11 ORF74390 - 0.0065 16.4 0.2 0.013 15.5 0.2 1.5 1 0 0 1 1 1 1 Insulin-like growth factor II E-peptide DUF5318 PF17249.2 ORF7435 - 0.066 13.0 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5318) PMBR PF09373.10 ORF74134 - 0.05 13.8 0.6 0.16 12.2 0.6 2.0 1 0 0 1 1 1 0 Pseudomurein-binding repeat DUF2527 PF10736.9 ORF72272 - 0.049 13.5 0.1 0.049 13.5 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) Stc1 PF12898.7 ORF69920 - 0.17 12.5 11.3 4.6 7.9 0.2 3.6 3 1 0 3 3 3 0 Stc1 domain Fer4_14 PF13394.6 ORF69920 - 6.6 6.9 10.7 61 3.8 0.1 4.1 4 0 0 4 4 4 0 4Fe-4S single cluster domain ETC_C1_NDUFA5 PF04716.14 ORF69636 - 3.8e-17 61.8 0.1 6.8e-17 61.0 0.1 1.4 1 0 0 1 1 1 1 ETC complex I subunit conserved region Globin PF00042.22 ORF69622 - 3.2e-16 59.9 0.1 4.8e-16 59.3 0.1 1.3 1 0 0 1 1 1 1 Globin Ntox35 PF15534.6 ORF69622 - 0.076 13.5 0.1 0.33 11.4 0.0 1.9 1 1 1 2 2 2 0 Bacterial toxin 35 YfdX PF10938.8 ORF69622 - 0.1 12.6 0.2 0.14 12.1 0.2 1.2 1 0 0 1 1 1 0 YfdX protein DUF4079 PF13301.6 ORF68775 - 1.2e-47 161.6 0.1 1.4e-47 161.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4079) DUF2157 PF09925.9 ORF68775 - 0.00014 21.7 2.8 0.00014 21.7 2.8 2.0 1 1 1 2 2 2 1 Predicted membrane protein (DUF2157) DUF2206 PF09971.9 ORF68775 - 0.017 13.9 0.0 0.024 13.4 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) DUF5129 PF17173.4 ORF68775 - 0.16 11.0 0.3 0.35 9.9 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5129) DUF2207 PF09972.9 ORF6802 - 0.0013 17.6 2.1 0.0013 17.6 2.1 1.9 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) Fibin PF15819.5 ORF6802 - 0.0017 18.1 0.2 0.0025 17.6 0.2 1.3 1 0 0 1 1 1 1 Fin bud initiation factor homologue BRE1 PF08647.11 ORF6802 - 0.0093 16.0 4.8 0.016 15.3 4.8 1.4 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase BLOC1_2 PF10046.9 ORF6802 - 0.012 15.9 2.4 0.012 15.9 2.4 1.9 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Pex24p PF06398.11 ORF6802 - 0.014 14.4 2.2 0.02 13.9 2.2 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF1664 PF07889.12 ORF6802 - 0.016 15.3 1.4 0.016 15.3 1.4 1.8 2 0 0 2 2 1 0 Protein of unknown function (DUF1664) SPATA1_C PF15743.5 ORF6802 - 0.044 13.9 0.6 0.06 13.4 0.6 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus Shisa PF13908.6 ORF6802 - 0.054 13.7 0.2 0.093 13.0 0.2 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Fib_alpha PF08702.10 ORF6802 - 0.086 13.0 4.5 0.35 11.0 4.4 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2615 PF11027.8 ORF6802 - 0.14 12.3 0.5 0.42 10.8 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2615) FAM76 PF16046.5 ORF6802 - 0.19 11.0 1.0 0.25 10.6 1.0 1.1 1 0 0 1 1 1 0 FAM76 protein Afaf PF15339.6 ORF6802 - 0.51 10.0 5.3 0.28 10.9 2.9 1.7 1 1 1 2 2 2 0 Acrosome formation-associated factor NPV_P10 PF05531.12 ORF6802 - 0.61 10.6 5.9 1.8 9.1 2.0 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein TMEM154 PF15102.6 ORF6802 - 1.1 9.1 4.3 1.5 8.7 2.1 2.0 2 0 0 2 2 2 0 TMEM154 protein family Orthoreo_P10 PF07204.11 ORF6802 - 3.8 7.5 5.0 20 5.2 3.1 2.2 2 0 0 2 2 2 0 Orthoreovirus membrane fusion protein p10 DUF4131 PF13567.6 ORF6802 - 4.5 6.9 7.9 80 2.8 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) ODV-E18 PF10717.9 ORF6802 - 6.1 6.8 5.7 11 6.0 0.0 2.5 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 HCMV_UL139 PF12507.8 ORF67966 - 0.05 14.0 3.3 4.4 7.7 0.1 2.2 2 0 0 2 2 2 0 Human Cytomegalovirus UL139 protein Fez1 PF06818.15 ORF67966 - 0.25 11.8 15.6 0.43 11.0 15.5 1.4 1 1 0 1 1 1 0 Fez1 WXG100 PF06013.12 ORF67966 - 0.3 11.3 5.1 2.1 8.7 0.7 2.8 3 0 0 3 3 3 0 Proteins of 100 residues with WXG Com_YlbF PF06133.11 ORF67966 - 0.35 11.5 13.8 0.18 12.4 2.7 2.4 1 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA DUF5082 PF16888.5 ORF67966 - 1.1 9.6 9.9 0.55 10.5 1.9 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) Cep57_CLD_2 PF14197.6 ORF67966 - 1.8 8.7 16.0 0.11 12.6 2.3 4.0 3 2 0 3 3 3 0 Centrosome localisation domain of PPC89 OmpH PF03938.14 ORF67966 - 4.1 7.7 16.0 5.9e+03 -2.5 16.0 2.2 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) ALMT PF11744.8 ORF67966 - 4.9 5.9 7.7 6.2 5.5 7.7 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter THOC7 PF05615.13 ORF67966 - 5.6 7.3 14.5 3.2 8.1 3.1 2.4 1 1 0 2 2 2 0 Tho complex subunit 7 zf-RING_2 PF13639.6 ORF65980 - 8.3e-11 42.0 14.8 8.3e-11 42.0 14.8 2.3 2 0 0 2 2 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF65980 - 2.1e-07 30.6 15.1 2.1e-07 30.6 15.1 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF65980 - 1.9e-05 24.9 15.1 7.3e-05 23.0 15.1 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF65980 - 9.3e-05 22.2 14.0 0.00033 20.4 14.0 2.0 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF65980 - 0.00028 20.7 16.6 0.00028 20.7 16.6 2.5 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF65980 - 0.00036 20.5 8.1 0.0019 18.2 8.1 2.2 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF65980 - 0.0027 17.3 12.8 0.0027 17.3 12.8 2.6 3 1 0 3 3 2 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF65980 - 0.0038 17.2 15.1 0.0038 17.2 15.1 2.2 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF65980 - 0.0052 16.8 13.8 0.016 15.2 13.8 1.9 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF65980 - 0.033 14.0 13.3 0.033 14.0 13.3 2.4 2 1 0 2 2 2 0 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF65980 - 4.2 7.6 20.3 0.26 11.5 13.8 2.3 2 1 0 2 2 2 0 FANCL C-terminal domain Globin PF00042.22 ORF6597 - 3.2e-16 59.9 0.1 4.8e-16 59.3 0.1 1.3 1 0 0 1 1 1 1 Globin Ntox35 PF15534.6 ORF6597 - 0.076 13.5 0.1 0.33 11.4 0.0 1.9 1 1 1 2 2 2 0 Bacterial toxin 35 YfdX PF10938.8 ORF6597 - 0.1 12.6 0.2 0.14 12.1 0.2 1.2 1 0 0 1 1 1 0 YfdX protein Coat_F PF07875.12 ORF64215 - 0.037 14.2 0.0 0.09 13.0 0.0 1.6 1 0 0 1 1 1 0 Coat F domain Pox_A28 PF04584.14 ORF63697 - 0.45 10.7 3.3 0.91 9.7 0.3 2.3 1 1 1 2 2 2 0 Poxvirus A28 family EamA PF00892.20 ORF63395 - 6.9e-13 48.9 8.6 6.9e-13 48.9 8.6 1.5 2 0 0 2 2 2 1 EamA-like transporter family zf-RING_2 PF13639.6 ORF60239 - 1.2e-09 38.3 5.2 1.2e-09 38.3 5.2 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF60239 - 1.2e-08 34.6 4.5 1.2e-08 34.6 4.5 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF60239 - 4.3e-07 29.7 5.5 4.3e-07 29.7 5.5 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING-like PF08746.11 ORF60239 - 7.7e-06 26.1 6.9 7.7e-06 26.1 6.9 2.2 2 0 0 2 2 2 1 RING-like domain Zn_ribbon_17 PF17120.5 ORF60239 - 1.1e-05 25.0 5.2 1.1e-05 25.0 5.2 2.0 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF60239 - 1.5e-05 24.7 3.3 4.9e-05 23.0 3.3 2.0 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF60239 - 1.9e-05 24.5 5.4 1.9e-05 24.5 5.4 2.3 2 0 0 2 2 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF60239 - 7.9e-05 22.9 9.8 7.9e-05 22.9 9.8 2.9 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF60239 - 9.1e-05 22.2 11.3 0.00015 21.5 3.9 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF60239 - 0.00024 21.1 5.4 0.00024 21.1 5.4 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF60239 - 0.0026 17.8 5.3 0.0026 17.8 5.3 2.6 2 1 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF60239 - 0.004 17.0 2.3 0.004 17.0 2.3 2.8 3 0 0 3 3 3 1 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 ORF60239 - 0.0079 16.0 5.1 0.0079 16.0 5.1 2.5 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 PHD PF00628.29 ORF60239 - 0.024 14.5 3.1 0.024 14.5 3.1 2.4 2 0 0 2 2 2 0 PHD-finger zf-Nse PF11789.8 ORF60239 - 0.025 14.4 3.3 0.048 13.5 3.3 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Rtf2 PF04641.12 ORF60239 - 0.15 11.4 2.2 0.27 10.6 2.2 1.4 1 0 0 1 1 1 0 Rtf2 RING-finger FAM163 PF15069.6 ORF60239 - 0.22 12.0 4.0 0.39 11.2 4.0 1.4 1 0 0 1 1 1 0 FAM163 family EphA2_TM PF14575.6 ORF60239 - 0.24 12.3 0.6 0.53 11.2 0.6 1.6 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain zf-ribbon_3 PF13248.6 ORF60239 - 0.59 9.6 0.1 0.59 9.6 0.1 3.5 4 0 0 4 4 3 0 zinc-ribbon domain zf-LITAF-like PF10601.9 ORF60239 - 1.2 9.5 15.6 1.4 9.2 3.6 2.9 2 1 0 2 2 2 0 LITAF-like zinc ribbon domain Zf_RING PF16744.5 ORF60239 - 1.4 9.1 11.7 0.44 10.7 4.5 2.3 2 0 0 2 2 2 0 KIAA1045 RING finger FANCL_C PF11793.8 ORF60239 - 1.6 8.9 11.9 0.14 12.3 4.3 2.8 2 1 0 2 2 2 0 FANCL C-terminal domain ADK_lid PF05191.14 ORF60239 - 2.7 8.0 15.2 3.4 7.7 2.2 3.5 2 2 0 2 2 2 0 Adenylate kinase, active site lid YhhN PF07947.14 ORF59343 - 7.6e-45 152.8 19.1 1.1e-44 152.3 19.1 1.2 1 0 0 1 1 1 1 YhhN family Snf7 PF03357.21 ORF58847 - 4.1e-14 52.6 33.3 8.5e-14 51.5 33.3 1.6 1 1 0 1 1 1 1 Snf7 Glyco_hydro_3_C PF01915.22 ORF58847 - 0.067 13.1 1.3 0.084 12.8 1.3 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain DUF1910 PF08928.10 ORF58847 - 4 7.5 9.8 0.19 11.8 2.8 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF1910) MxiM PF11441.8 ORF56395 - 0.2 11.9 0.2 0.2 11.9 0.2 1.6 2 0 0 2 2 2 0 Pilot protein MxiM DUF2244 PF10003.9 ORF54332 - 0.031 13.9 0.0 0.045 13.4 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) NABP PF07990.12 ORF53916 - 0.058 12.9 0.0 0.082 12.4 0.0 1.1 1 0 0 1 1 1 0 Nucleic acid binding protein NABP UEV PF05743.13 ORF53286 - 9.1e-07 28.8 0.2 1.4e-06 28.1 0.2 1.3 1 0 0 1 1 1 1 UEV domain RWD PF05773.22 ORF53286 - 0.0021 18.3 3.8 0.0053 17.0 2.1 2.4 1 1 0 1 1 1 1 RWD domain SOG2 PF10428.9 ORF53286 - 0.021 14.0 0.3 0.027 13.7 0.3 1.2 1 0 0 1 1 1 0 RAM signalling pathway protein FAD_binding_9 PF08021.11 ORF53286 - 0.043 14.0 0.1 2.2 8.5 0.0 2.3 2 0 0 2 2 2 0 Siderophore-interacting FAD-binding domain UQ_con PF00179.26 ORF53286 - 0.066 12.8 1.0 0.13 11.9 0.3 1.7 1 1 1 2 2 2 0 Ubiquitin-conjugating enzyme TRAPPC-Trs85 PF12739.7 ORF53286 - 0.073 12.0 0.1 0.079 11.9 0.1 1.1 1 0 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit SUKH-4 PF14435.6 ORF50144 - 0.031 14.3 0.2 0.041 14.0 0.2 1.3 1 0 0 1 1 1 0 SUKH-4 immunity protein Apolipoprotein PF01442.18 ORF49350 - 0.018 14.9 0.4 0.033 14.1 0.4 1.4 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF1664 PF07889.12 ORF49350 - 0.24 11.4 15.1 0.39 10.7 10.3 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) GPS2_interact PF15784.5 ORF49350 - 0.39 11.2 9.2 0.087 13.3 4.5 2.2 1 1 1 2 2 2 0 G-protein pathway suppressor 2-interacting domain FliG_N PF14842.6 ORF49350 - 0.5 10.9 4.5 0.31 11.6 2.1 1.9 2 1 0 2 2 2 0 FliG N-terminal domain IF-2B PF01008.17 ORF49350 - 1.1 8.4 9.6 0.1 11.8 5.2 1.5 2 0 0 2 2 2 0 Initiation factor 2 subunit family Spore_III_AB PF09548.10 ORF49350 - 2 8.5 7.1 4.3 7.4 6.4 2.0 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) KMP11 PF03037.16 ORF49350 - 2.6 8.9 13.6 2.3 9.1 2.6 2.8 1 1 1 2 2 2 0 Kinetoplastid membrane protein 11 DUF948 PF06103.11 ORF49350 - 3.7 7.9 11.6 2.5 8.4 4.9 2.9 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) zf-CRD PF17979.1 ORF49350 - 4.1 7.5 11.0 0.67 10.0 5.3 2.0 1 1 1 2 2 2 0 Cysteine rich domain with multizinc binding regions Exonuc_VII_L PF02601.15 ORF49350 - 6.4 6.3 8.6 27 4.2 8.6 1.9 1 1 0 1 1 1 0 Exonuclease VII, large subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks108.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks108.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks108.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks108.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:02:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Thioredoxin_8 PF13905.6 ORF47315 - 3.4e-22 78.6 1.0 5.3e-22 78.0 0.3 1.7 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF47315 - 0.11 13.0 0.4 0.25 11.8 0.1 1.8 2 0 0 2 2 2 0 Thioredoxin-like domain S-methyl_trans PF02574.16 ORF4474 - 6.2e-23 82.0 0.3 7.3e-23 81.7 0.3 1.1 1 0 0 1 1 1 1 Homocysteine S-methyltransferase Amidase_3 PF01520.18 ORF41807 - 1.9e-32 112.8 0.0 2.7e-32 112.3 0.0 1.2 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase OmpA PF00691.20 ORF41807 - 0.046 14.1 0.1 0.21 12.0 0.0 2.0 2 0 0 2 2 2 0 OmpA family TPR_9 PF13371.6 ORF37738 - 0.078 13.1 1.4 0.12 12.5 0.2 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat Ank_2 PF12796.7 ORF3441 - 4.1e-07 30.5 0.0 0.022 15.3 0.0 2.7 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF3441 - 2.9e-06 27.5 0.3 0.058 13.7 0.1 3.3 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF3441 - 1.9e-05 24.9 0.1 0.47 11.0 0.0 3.2 2 1 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF3441 - 5.4e-05 23.3 0.2 3.4 8.5 0.0 4.2 3 1 1 4 4 4 2 Ankyrin repeat MurB_C PF02873.16 ORF3441 - 0.02 14.9 0.0 0.84 9.7 0.0 2.1 2 0 0 2 2 2 0 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Ank_4 PF13637.6 ORF3441 - 0.049 14.2 0.1 2.3 8.9 0.0 2.7 3 0 0 3 3 3 0 Ankyrin repeats (many copies) LigT_PEase PF02834.16 ORF3441 - 0.087 13.0 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 LigT like Phosphoesterase Snf7 PF03357.21 ORF32824 - 2.7e-15 56.4 29.0 2.7e-15 56.4 29.0 1.9 1 1 1 2 2 2 2 Snf7 Glyco_hydro_3_C PF01915.22 ORF32824 - 0.055 13.4 1.0 0.068 13.1 1.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain DUF1910 PF08928.10 ORF32824 - 2.5 8.1 9.0 0.19 11.8 2.8 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF1910) Minor_capsid_2 PF11114.8 ORF29654 - 0.031 14.3 0.0 0.051 13.6 0.0 1.3 1 0 0 1 1 1 0 Minor capsid protein TPR_9 PF13371.6 ORF25232 - 0.078 13.1 1.4 0.12 12.5 0.2 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF305 PF03713.13 ORF24652 - 0.00036 20.7 0.1 0.00046 20.3 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF305) UBX PF00789.20 ORF22752 - 0.033 14.4 0.1 24 5.2 0.0 3.0 1 1 2 3 3 3 0 UBX domain Phage_TTP_12 PF16461.5 ORF22752 - 0.11 12.2 0.0 0.38 10.4 0.0 1.8 1 1 1 2 2 2 0 Lambda phage tail tube protein, TTP Mem_trans PF03547.18 ORF21301 - 6.2e-07 28.2 0.5 0.0048 15.4 0.0 2.1 1 1 1 2 2 2 2 Membrane transport protein VAD1-2 PF15310.6 ORF21027 - 0.3 10.9 4.0 0.32 10.8 2.6 1.8 1 1 1 2 2 2 0 Vitamin A-deficiency (VAD) rat model signalling Proteasome PF00227.26 ORF1854 - 1e-19 70.8 0.0 1.3e-19 70.5 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit P_C10 PF14974.6 ORF17230 - 0.00053 20.1 0.0 0.00096 19.2 0.0 1.4 1 0 0 1 1 1 1 Protein C10 TerB_C PF15615.6 ORF17230 - 0.0034 17.7 0.2 0.012 15.9 0.1 1.7 2 0 0 2 2 2 1 TerB-C domain uDENN PF03456.18 ORF16813 - 3.4e-15 56.5 1.2 3.4e-15 56.5 1.2 1.7 2 0 0 2 2 2 1 uDENN domain DENN PF02141.21 ORF16813 - 0.00013 22.0 0.2 0.0002 21.4 0.2 1.3 1 0 0 1 1 1 1 DENN (AEX-3) domain UBX PF00789.20 ORF15825 - 0.033 14.4 0.1 24 5.2 0.0 3.0 1 1 2 3 3 3 0 UBX domain Phage_TTP_12 PF16461.5 ORF15825 - 0.11 12.2 0.0 0.38 10.4 0.0 1.8 1 1 1 2 2 2 0 Lambda phage tail tube protein, TTP DMT_YdcZ PF04657.13 ORF15624 - 0.0011 19.3 0.0 0.0023 18.2 0.0 1.5 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ Kinesin PF00225.23 ORF153002 - 1.7e-41 142.3 3.5 3.4e-40 138.0 3.5 2.0 1 1 0 1 1 1 1 Kinesin motor domain DUF5011 PF16403.5 ORF153002 - 0.63 10.2 2.6 1.7 8.8 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF5011) Ribosomal_L38e PF01781.18 ORF151032 - 0.054 13.6 0.6 0.095 12.8 0.6 1.5 1 0 0 1 1 1 0 Ribosomal L38e protein family VF530 PF09905.9 ORF151032 - 0.11 12.7 0.1 0.43 10.8 0.0 2.0 2 0 0 2 2 2 0 DNA-binding protein VF530 Moricin PF06451.11 ORF151032 - 0.14 12.0 0.8 0.22 11.3 0.1 1.8 2 0 0 2 2 2 0 Moricin MORN PF02493.20 ORF151032 - 0.78 9.8 5.7 1.5 8.8 0.9 3.0 3 0 0 3 3 3 0 MORN repeat DUF2102 PF09875.9 ORF149610 - 3.8 7.3 4.6 1.9 8.3 0.3 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2102) Snf7 PF03357.21 ORF148425 - 1e-18 67.5 31.9 1e-18 67.5 31.9 1.8 1 1 0 2 2 2 1 Snf7 RNA_pol_Rpb1_5 PF04998.17 ORF148425 - 0.58 9.5 7.3 0.75 9.2 7.3 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 ABC_tran_CTD PF16326.5 ORF148425 - 4.8 7.5 27.2 3.3 8.0 8.2 4.1 1 1 2 3 3 3 0 ABC transporter C-terminal domain Globin PF00042.22 ORF148412 - 3.2e-16 59.9 0.1 4.8e-16 59.3 0.1 1.3 1 0 0 1 1 1 1 Globin Ntox35 PF15534.6 ORF148412 - 0.076 13.5 0.1 0.33 11.4 0.0 1.9 1 1 1 2 2 2 0 Bacterial toxin 35 YfdX PF10938.8 ORF148412 - 0.1 12.6 0.2 0.14 12.1 0.2 1.2 1 0 0 1 1 1 0 YfdX protein zf-C3HC4 PF00097.25 ORF147911 - 1.7e-08 34.1 9.3 2.8e-08 33.5 9.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF147911 - 3.4e-08 33.2 6.9 6e-08 32.4 6.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF147911 - 6.1e-08 32.9 10.0 9.2e-08 32.3 10.0 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF147911 - 1.1e-07 31.6 6.1 1.6e-07 31.1 6.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF147911 - 3e-07 30.3 5.1 7.6e-07 29.1 2.8 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF147911 - 7.2e-07 29.1 8.3 1.2e-06 28.4 8.3 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF147911 - 3.3e-06 26.9 6.9 5.4e-06 26.2 6.9 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF147911 - 4.7e-06 26.7 8.6 7.5e-06 26.0 8.6 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Rtf2 PF04641.12 ORF147911 - 0.00014 21.3 0.1 0.00016 21.2 0.1 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-rbx1 PF12678.7 ORF147911 - 0.00041 20.6 8.5 0.00079 19.7 8.5 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF147911 - 0.0075 16.3 3.1 0.015 15.3 3.1 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Cytochrom_C PF00034.21 ORF147911 - 0.045 14.9 0.0 0.079 14.1 0.0 1.4 1 0 0 1 1 1 0 Cytochrome c Baculo_IE-1 PF05290.11 ORF147911 - 0.092 12.7 7.5 0.088 12.8 5.9 1.8 2 0 0 2 2 2 0 Baculovirus immediate-early protein (IE-0) zf-Nse PF11789.8 ORF147911 - 0.12 12.2 6.4 0.11 12.3 4.9 1.7 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit HscB_4_cys PF18256.1 ORF147911 - 0.14 12.0 1.6 0.33 10.8 1.6 1.6 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif zf-RING_4 PF14570.6 ORF147911 - 0.52 10.2 6.6 1.3 8.9 6.6 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn_ribbon_17 PF17120.5 ORF147911 - 1.1 8.9 7.1 2 8.1 7.1 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type ID PF18543.1 ORF147903 - 0.042 13.9 0.1 0.086 12.9 0.1 1.4 1 0 0 1 1 1 0 Intracellular delivery domain PsbX PF06596.11 ORF147903 - 0.049 13.6 0.8 0.15 12.0 0.8 1.9 1 0 0 1 1 1 0 Photosystem II reaction centre X protein (PsbX) ACT_4 PF13291.6 ORF147322 - 0.13 12.9 0.0 0.19 12.3 0.0 1.2 1 0 0 1 1 1 0 ACT domain Leuk-A4-hydro_C PF09127.11 ORF147134 - 3.5e-26 91.5 0.0 6.5e-26 90.6 0.0 1.4 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Adeno_knob PF00541.17 ORF143784 - 0.022 14.5 0.0 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 Adenoviral fibre protein (knob domain) CDC45 PF02724.14 ORF142254 - 1.1 7.5 4.8 1.4 7.1 4.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Orf78 PF06024.12 ORF142254 - 2.5 8.4 5.3 3.3 8.1 3.7 2.0 2 1 0 2 2 2 0 Orf78 (ac78) MORN PF02493.20 ORF141849 - 1e-21 75.5 23.9 3.9e-06 26.4 0.2 6.1 5 1 0 5 5 5 5 MORN repeat DUF3048_C PF17479.2 ORF141849 - 0.00094 19.5 6.8 0.26 11.7 0.2 3.3 1 1 2 3 3 3 2 Protein of unknown function (DUF3048) C-terminal domain Pkinase PF00069.25 ORF140235 - 0.0012 18.2 0.0 0.0019 17.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Neurexophilin PF06312.12 ORF135059 - 0.018 14.5 0.7 0.028 13.9 0.7 1.3 1 0 0 1 1 1 0 Neurexophilin PfkB PF00294.24 ORF134841 - 0.083 12.2 0.0 0.17 11.2 0.0 1.4 2 0 0 2 2 2 0 pfkB family carbohydrate kinase CCDC106 PF15794.5 ORF134841 - 6.2 6.5 13.1 1.7 8.3 5.5 2.1 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 106 TRP PF06011.12 ORF132999 - 0.0007 18.4 6.6 0.0011 17.8 6.6 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel NnrU PF07298.11 ORF132999 - 0.015 14.8 0.2 0.026 14.0 0.2 1.5 1 1 0 1 1 1 0 NnrU protein Shisa PF13908.6 ORF132999 - 4.8 7.4 6.8 0.91 9.7 1.5 2.2 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator Ras PF00071.22 ORF131840 - 9.7e-48 161.8 0.0 1.3e-47 161.5 0.0 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF131840 - 8.7e-32 109.9 0.0 1.2e-31 109.4 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF131840 - 1.1e-08 34.8 0.0 1.3e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF131840 - 1.2e-08 35.0 0.0 2.2e-08 34.2 0.0 1.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF131840 - 7.8e-07 28.8 0.0 4.7e-06 26.3 0.0 1.9 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF131840 - 5.5e-05 22.6 0.0 7.1e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF131840 - 0.00073 19.5 0.0 0.73 9.7 0.0 2.2 1 1 1 2 2 2 2 RsgA GTPase CPT PF07931.12 ORF131840 - 0.017 15.0 0.0 0.027 14.3 0.0 1.4 1 1 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_14 PF13173.6 ORF131840 - 0.02 14.9 0.0 0.03 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF131840 - 0.035 14.5 0.0 0.08 13.3 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain EamA PF00892.20 ORF128709 - 3.6e-08 33.7 22.2 5.2e-05 23.4 15.1 2.5 2 1 1 3 3 3 2 EamA-like transporter family Yip1 PF04893.17 ORF128709 - 0.037 13.8 9.0 0.049 13.3 9.0 1.3 1 0 0 1 1 1 0 Yip1 domain PelG PF16933.5 ORF128709 - 0.31 9.8 13.5 0.56 9.0 13.5 1.3 1 0 0 1 1 1 0 Putative exopolysaccharide Exporter (EPS-E) DUF5453 PF17534.2 ORF128709 - 2.6 8.0 10.2 2.3 8.2 5.4 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5453) Leuk-A4-hydro_C PF09127.11 ORF127460 - 3.5e-26 91.5 0.0 6.5e-26 90.6 0.0 1.4 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal PCP PF02429.15 ORF127402 - 1.7e-62 210.0 8.5 2.1e-62 209.7 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF127402 - 0.087 13.2 3.5 0.063 13.7 0.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF732) 7TM_GPCR_Srab PF10292.9 ORF126478 - 0.025 13.5 0.1 0.027 13.4 0.1 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor RALF PF05498.11 ORF126300 - 0.019 16.0 1.1 0.05 14.6 1.1 1.7 1 0 0 1 1 1 0 Rapid ALkalinization Factor (RALF) EF-hand_7 PF13499.6 ORF125436 - 3.6e-14 53.0 23.5 1.1e-06 29.0 0.4 3.5 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF125436 - 1.9e-10 39.8 7.4 0.01 15.7 0.1 4.4 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF125436 - 2.5e-10 39.1 12.6 0.0092 15.5 0.1 4.2 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF125436 - 4.6e-10 39.2 12.1 0.0017 18.2 0.3 4.0 1 1 3 4 4 4 3 EF-hand domain pair Pkinase PF00069.25 ORF125436 - 0.002 17.5 3.8 0.0076 15.6 0.0 2.7 2 1 0 2 2 2 1 Protein kinase domain EF-hand_11 PF08976.11 ORF125436 - 0.0032 18.3 1.0 0.0078 17.1 0.4 2.0 1 1 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF125436 - 0.0064 15.9 6.4 1.3 8.7 0.3 3.5 3 0 0 3 3 3 1 EF hand S-AdoMet_synt_N PF00438.20 ORF125436 - 0.033 14.9 0.2 0.57 10.9 0.0 2.2 2 0 0 2 2 2 0 S-adenosylmethionine synthetase, N-terminal domain pPIWI_RE_REase PF18154.1 ORF125436 - 0.1 12.6 0.1 2 8.4 0.0 2.4 1 1 0 2 2 2 0 REase associating with pPIWI_RE Vps4_C PF09336.10 ORF125436 - 0.12 12.4 6.8 0.31 11.1 0.4 3.2 2 1 1 3 3 3 0 Vps4 C terminal oligomerisation domain ETRAMP PF09716.10 ORF125273 - 0.0033 17.4 0.3 0.0072 16.4 0.3 1.6 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) DUF2207 PF09972.9 ORF125273 - 0.0069 15.2 0.3 0.0069 15.2 0.3 1.5 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) Membralin PF09746.9 ORF125273 - 0.011 14.9 2.4 0.011 14.9 2.4 1.5 1 1 0 1 1 1 0 Tumour-associated protein DUF4448 PF14610.6 ORF125273 - 0.076 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) RIFIN PF02009.16 ORF125273 - 0.11 12.4 1.4 0.11 12.3 0.5 1.4 2 0 0 2 2 2 0 Rifin Orf78 PF06024.12 ORF125273 - 1.7 9.0 5.6 3.2 8.1 0.9 2.5 2 1 0 2 2 2 0 Orf78 (ac78) UEV PF05743.13 ORF123128 - 9.1e-07 28.8 0.2 1.4e-06 28.1 0.2 1.3 1 0 0 1 1 1 1 UEV domain RWD PF05773.22 ORF123128 - 0.0021 18.3 3.8 0.0053 17.0 2.1 2.4 1 1 0 1 1 1 1 RWD domain SOG2 PF10428.9 ORF123128 - 0.021 14.0 0.3 0.027 13.7 0.3 1.2 1 0 0 1 1 1 0 RAM signalling pathway protein FAD_binding_9 PF08021.11 ORF123128 - 0.043 14.0 0.1 2.2 8.5 0.0 2.3 2 0 0 2 2 2 0 Siderophore-interacting FAD-binding domain UQ_con PF00179.26 ORF123128 - 0.066 12.8 1.0 0.13 11.9 0.3 1.7 1 1 1 2 2 2 0 Ubiquitin-conjugating enzyme TRAPPC-Trs85 PF12739.7 ORF123128 - 0.073 12.0 0.1 0.079 11.9 0.1 1.1 1 0 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit ALG3 PF05208.13 ORF122712 - 1.8e-17 63.8 14.6 2.3e-17 63.5 14.6 1.1 1 0 0 1 1 1 1 ALG3 protein MatB PF16449.5 ORF121962 - 1.9e-90 301.1 13.7 2.5e-90 300.7 13.7 1.1 1 0 0 1 1 1 1 Fimbrillin MatB AbiTii PF18864.1 ORF120626 - 0.0044 17.2 0.4 0.0079 16.4 0.4 1.3 1 0 0 1 1 1 1 AbiTii Comm PF15957.5 ORF120626 - 0.036 14.4 0.1 0.23 11.8 0.0 2.0 1 1 1 2 2 2 0 Commissureless Syntaxin_2 PF14523.6 ORF120626 - 0.065 13.6 6.7 0.09 13.2 1.9 3.2 1 1 1 2 2 2 0 Syntaxin-like protein Syntaxin PF00804.25 ORF120626 - 0.18 11.4 7.1 7.7 6.1 7.1 2.5 1 1 0 1 1 1 0 Syntaxin Pkinase PF00069.25 ORF117116 - 7.6e-06 25.5 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain ETRAMP PF09716.10 ORF117015 - 0.0033 17.4 0.3 0.0072 16.4 0.3 1.6 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) DUF2207 PF09972.9 ORF117015 - 0.0069 15.2 0.3 0.0069 15.2 0.3 1.5 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) Membralin PF09746.9 ORF117015 - 0.011 14.9 2.4 0.011 14.9 2.4 1.5 1 1 0 1 1 1 0 Tumour-associated protein DUF4448 PF14610.6 ORF117015 - 0.076 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) RIFIN PF02009.16 ORF117015 - 0.11 12.4 1.4 0.11 12.3 0.5 1.4 2 0 0 2 2 2 0 Rifin Orf78 PF06024.12 ORF117015 - 1.7 9.0 5.6 3.2 8.1 0.9 2.5 2 1 0 2 2 2 0 Orf78 (ac78) Pkinase PF00069.25 ORF114625 - 7.6e-06 25.5 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Senescence PF06911.12 ORF114481 - 0.16 12.3 4.3 1.6 9.0 4.3 2.2 1 1 0 1 1 1 0 Senescence-associated protein Knl1_RWD_C PF18210.1 ORF111738 - 0.0004 20.8 0.3 0.00091 19.7 0.3 1.7 1 0 0 1 1 1 1 Knl1 RWD C-terminal domain POLO_box PF00659.18 ORF110472 - 1.7e-18 66.6 0.4 4e-18 65.4 0.4 1.7 1 0 0 1 1 1 1 POLO box duplicated region MlaC PF05494.12 ORF109557 - 9.3e-54 181.6 0.1 1.1e-53 181.4 0.1 1.1 1 0 0 1 1 1 1 MlaC protein Torus PF16131.5 ORF108677 - 0.014 16.0 1.8 0.022 15.4 1.8 1.3 1 0 0 1 1 1 0 Torus domain HMGL-like PF00682.19 ORF108677 - 0.021 14.4 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 HMGL-like PRP1_N PF06424.12 ORF108285 - 0.15 12.5 0.1 0.2 12.1 0.1 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal zf-RING_2 PF13639.6 ORF102950 - 1.2e-09 38.3 5.2 1.2e-09 38.3 5.2 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF102950 - 1.2e-08 34.6 4.5 1.2e-08 34.6 4.5 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF102950 - 4.3e-07 29.7 5.5 4.3e-07 29.7 5.5 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING-like PF08746.11 ORF102950 - 7.7e-06 26.1 6.9 7.7e-06 26.1 6.9 2.2 2 0 0 2 2 2 1 RING-like domain Zn_ribbon_17 PF17120.5 ORF102950 - 1.1e-05 25.0 5.2 1.1e-05 25.0 5.2 2.0 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF102950 - 1.5e-05 24.7 3.3 4.9e-05 23.0 3.3 2.0 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF102950 - 1.9e-05 24.5 5.4 1.9e-05 24.5 5.4 2.3 2 0 0 2 2 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF102950 - 7.9e-05 22.9 9.8 7.9e-05 22.9 9.8 2.9 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF102950 - 9.1e-05 22.2 11.3 0.00015 21.5 3.9 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF102950 - 0.00024 21.1 5.4 0.00024 21.1 5.4 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF102950 - 0.0026 17.8 5.3 0.0026 17.8 5.3 2.6 2 1 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF102950 - 0.004 17.0 2.3 0.004 17.0 2.3 2.8 3 0 0 3 3 3 1 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 ORF102950 - 0.0079 16.0 5.1 0.0079 16.0 5.1 2.5 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 PHD PF00628.29 ORF102950 - 0.024 14.5 3.1 0.024 14.5 3.1 2.4 2 0 0 2 2 2 0 PHD-finger zf-Nse PF11789.8 ORF102950 - 0.025 14.4 3.3 0.048 13.5 3.3 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Rtf2 PF04641.12 ORF102950 - 0.15 11.4 2.2 0.27 10.6 2.2 1.4 1 0 0 1 1 1 0 Rtf2 RING-finger FAM163 PF15069.6 ORF102950 - 0.22 12.0 4.0 0.39 11.2 4.0 1.4 1 0 0 1 1 1 0 FAM163 family EphA2_TM PF14575.6 ORF102950 - 0.24 12.3 0.6 0.53 11.2 0.6 1.6 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain zf-ribbon_3 PF13248.6 ORF102950 - 0.59 9.6 0.1 0.59 9.6 0.1 3.5 4 0 0 4 4 3 0 zinc-ribbon domain zf-LITAF-like PF10601.9 ORF102950 - 1.2 9.5 15.6 1.4 9.2 3.6 2.9 2 1 0 2 2 2 0 LITAF-like zinc ribbon domain Zf_RING PF16744.5 ORF102950 - 1.4 9.1 11.7 0.44 10.7 4.5 2.3 2 0 0 2 2 2 0 KIAA1045 RING finger FANCL_C PF11793.8 ORF102950 - 1.6 8.9 11.9 0.14 12.3 4.3 2.8 2 1 0 2 2 2 0 FANCL C-terminal domain ADK_lid PF05191.14 ORF102950 - 2.7 8.0 15.2 3.4 7.7 2.2 3.5 2 2 0 2 2 2 0 Adenylate kinase, active site lid Ras PF00071.22 ORF102436 - 7.9e-54 181.6 0.1 9.3e-54 181.4 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF102436 - 2.2e-32 111.8 0.1 3.2e-32 111.3 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF102436 - 5.3e-10 39.0 0.0 6.7e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF102436 - 4.8e-08 32.6 0.1 5.8e-08 32.4 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF102436 - 1.3e-05 24.8 0.4 0.00012 21.7 0.3 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF102436 - 6.7e-05 23.0 0.0 0.00011 22.2 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF102436 - 0.0042 17.0 0.8 0.03 14.2 0.2 2.2 1 1 0 2 2 2 1 RsgA GTPase AAA_7 PF12775.7 ORF102436 - 0.0063 16.0 0.0 0.012 15.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_22 PF13401.6 ORF102436 - 0.031 14.5 0.3 0.11 12.8 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 ORF102436 - 0.032 13.9 0.0 0.045 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF102436 - 0.072 13.5 0.1 0.11 12.9 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 ORF102436 - 0.1 12.6 0.1 0.38 10.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 ORF102436 - 0.12 12.2 0.0 0.29 10.9 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain NTPase_1 PF03266.15 ORF102436 - 0.16 11.9 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 NTPase Pkinase PF00069.25 ORF101723 - 7.6e-06 25.5 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Cyt_bd_oxida_II PF02322.15 ORF100811 - 0.092 12.1 11.0 0.1 11.9 11.0 1.1 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit II Ndc1_Nup PF09531.10 ORF100811 - 0.78 8.4 11.2 0.97 8.0 11.2 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup CreD PF06123.12 ORF100238 - 0.16 10.7 0.2 0.2 10.4 0.2 1.1 1 0 0 1 1 1 0 Inner membrane protein CreD Beta-lactamase PF00144.24 NODE_34435_length_628_cov_290.413153_g27503_i0forward_frame_1 - 0.0097 15.2 0.0 0.014 14.6 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase GlutR_N PF05201.15 NODE_34421_length_629_cov_3.183502_g27493_i0reverse_frame_1 - 1.3e-53 180.6 0.0 1.6e-53 180.4 0.0 1.1 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain DUF1635 PF07795.11 NODE_34420_length_629_cov_3.207071_g27492_i0reverse_frame_1 - 0.022 14.6 1.3 0.032 14.1 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) HTH_Tnp_IS630 PF01710.16 NODE_34399_length_629_cov_133.808081_g27473_i0forward_frame_1 - 0.0065 16.5 0.4 0.0065 16.5 0.4 1.8 2 0 0 2 2 2 1 Transposase Nup35_RRM PF05172.13 NODE_34399_length_629_cov_133.808081_g27473_i0forward_frame_1 - 0.022 14.7 0.1 0.041 13.8 0.1 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Herpes_LMP1 PF05297.11 NODE_34391_length_629_cov_424.493266_g27467_i0forward_frame_1 - 2.3 7.3 7.1 3.3 6.8 7.1 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) S_100 PF01023.19 NODE_34371_length_630_cov_3.715966_g27451_i0reverse_frame_1 - 0.018 14.7 0.4 0.67 9.7 0.1 2.2 2 0 0 2 2 2 0 S-100/ICaBP type calcium binding domain SelK_SelG PF10961.8 NODE_34354_length_630_cov_138.421849_g27435_i0forward_frame_1 - 0.41 11.3 3.2 2.6 8.7 0.5 2.4 2 0 0 2 2 2 0 Selenoprotein SelK_SelG Spc7 PF08317.11 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 0.0062 15.5 7.3 0.008 15.1 7.3 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein Protocadherin PF08374.11 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 0.0077 16.2 0.4 0.0077 16.2 0.4 1.6 2 0 0 2 2 2 1 Protocadherin DUF3584 PF12128.8 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 0.027 12.0 14.2 0.034 11.7 14.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) MitMem_reg PF13012.6 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 0.055 13.9 0.6 0.093 13.2 0.6 1.4 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function DUF4407 PF14362.6 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 0.18 11.1 6.4 0.22 10.9 6.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TPR_MLP1_2 PF07926.12 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 0.27 11.3 16.4 0.57 10.2 16.4 1.6 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Spore_III_AB PF09548.10 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 0.76 9.9 6.3 0.95 9.5 0.1 2.3 2 0 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) Exonuc_VII_L PF02601.15 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 1.8 8.0 11.1 2.5 7.6 11.1 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit PRP38_assoc PF12871.7 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 1.8 9.2 10.1 0.28 11.8 2.1 2.3 2 0 0 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term ADIP PF11559.8 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 2.3 8.3 16.6 0.069 13.2 10.6 1.6 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding OmpH PF03938.14 NODE_34320_length_631_cov_94.087248_g27407_i0forward_frame_2 - 5.1 7.4 23.6 17 5.8 17.2 2.3 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Agouti PF05039.12 NODE_34301_length_631_cov_253.179530_g27389_i0reverse_frame_3 - 0.44 11.3 8.6 0.13 13.0 3.9 2.3 2 1 1 3 3 3 0 Agouti protein Gly-zipper_YMGG PF13441.6 NODE_34295_length_631_cov_443.926174_g27383_i0reverse_frame_3 - 0.15 11.8 33.9 0.089 12.5 15.2 2.4 2 0 0 2 2 2 0 YMGG-like Gly-zipper Romo1 PF10247.9 NODE_34295_length_631_cov_443.926174_g27383_i0reverse_frame_3 - 1.1 9.7 23.7 3.4 8.1 1.7 3.4 1 1 2 3 3 3 0 Reactive mitochondrial oxygen species modulator 1 Bacteriocin_IIc PF10439.9 NODE_34295_length_631_cov_443.926174_g27383_i0reverse_frame_3 - 1.4 9.0 31.8 0.18 11.9 11.6 2.3 2 0 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide Gly-zipper_OmpA PF13436.6 NODE_34295_length_631_cov_443.926174_g27383_i0reverse_frame_3 - 1.7 8.5 36.2 0.06 13.1 16.0 2.6 2 0 0 2 2 2 0 Glycine-zipper domain Gly-zipper_Omp PF13488.6 NODE_34295_length_631_cov_443.926174_g27383_i0reverse_frame_3 - 1.7 8.7 40.0 0.13 12.3 17.2 2.3 2 0 0 2 2 2 0 Glycine zipper MccV PF17508.2 NODE_34295_length_631_cov_443.926174_g27383_i0reverse_frame_3 - 2.5 8.7 18.2 3.7 8.2 6.8 2.5 1 1 1 2 2 2 0 Microcin V bacteriocin Rick_17kDa_Anti PF05433.15 NODE_34295_length_631_cov_443.926174_g27383_i0reverse_frame_3 - 6.3 6.8 38.4 0.28 11.1 16.3 2.6 2 1 1 3 3 3 0 Glycine zipper 2TM domain Ni_hydr_CYTB PF01292.20 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 3.4e-10 39.8 0.1 4.8e-10 39.3 0.1 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 0.0066 16.6 0.2 0.011 15.9 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF4079) DUF2231 PF09990.9 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 0.011 16.2 0.2 0.02 15.3 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Cytochrom_B561 PF03188.16 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 0.026 14.7 0.3 0.032 14.4 0.3 1.3 1 0 0 1 1 1 0 Eukaryotic cytochrome b561 Ferric_reduct PF01794.19 NODE_34290_length_631_cov_1208.260067_g27378_i0reverse_frame_3 - 0.21 11.7 4.1 0.83 9.8 0.3 2.1 1 1 1 2 2 2 0 Ferric reductase like transmembrane component AbiEi_3 PF11459.8 NODE_34290_length_631_cov_1208.260067_g27378_i0forward_frame_3 - 0.097 12.4 0.2 0.15 11.7 0.2 1.2 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin, Type IV TA system Cdc6_C PF09079.11 NODE_34280_length_632_cov_3.435511_g27372_i0reverse_frame_3 - 4.4e-06 26.6 0.1 1.4e-05 24.9 0.0 1.8 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain DUF2172 PF09940.9 NODE_34280_length_632_cov_3.435511_g27372_i0reverse_frame_3 - 0.045 14.2 1.0 0.23 11.9 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF2172) Ribosomal_L4 PF00573.22 NODE_34280_length_632_cov_3.435511_g27372_i0reverse_frame_3 - 0.085 12.5 0.6 0.12 12.0 0.6 1.2 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family Sprouty PF05210.13 NODE_34258_length_632_cov_192.045226_g27352_i0reverse_frame_3 - 0.15 12.5 1.1 0.28 11.6 0.1 1.8 2 0 0 2 2 2 0 Sprouty protein (Spry) SOG2 PF10428.9 NODE_34258_length_632_cov_192.045226_g27352_i0forward_frame_2 - 0.066 12.4 6.9 0.076 12.2 6.9 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein Orf78 PF06024.12 NODE_34257_length_632_cov_198.314908_g26968_i1reverse_frame_3 - 0.096 13.0 2.2 0.097 13.0 0.3 1.9 2 0 0 2 2 2 0 Orf78 (ac78) DUF35_N PF12172.8 NODE_34249_length_632_cov_389.465662_g27344_i0reverse_frame_2 - 0.89 9.5 0.1 0.89 9.5 0.1 3.3 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Uso1_p115_C PF04871.13 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.0095 16.3 7.8 0.014 15.7 7.8 1.2 1 0 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, C terminal region SNARE PF05739.19 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.015 15.2 0.9 0.026 14.5 0.2 1.7 2 0 0 2 2 2 0 SNARE domain eIF-3_zeta PF05091.12 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.023 13.7 0.9 0.026 13.5 0.9 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) LMBR1 PF04791.16 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.026 13.5 0.1 0.027 13.4 0.1 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF883 PF05957.13 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.039 14.6 5.1 0.039 14.6 5.1 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) OmpH PF03938.14 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.055 13.8 12.3 0.087 13.2 12.3 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Atg14 PF10186.9 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.18 10.8 3.3 0.23 10.5 3.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 BAR PF03114.18 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.28 10.8 7.9 0.45 10.1 7.9 1.3 1 0 0 1 1 1 0 BAR domain DUF812 PF05667.11 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.36 9.7 11.6 1.5 7.6 10.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF812) DUF4407 PF14362.6 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.39 10.0 5.3 0.48 9.7 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3987 PF13148.6 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.44 9.5 5.2 0.57 9.1 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) TMPIT PF07851.13 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.5 9.6 3.9 0.67 9.1 3.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF2894 PF11445.8 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 0.53 10.7 5.5 0.78 10.2 5.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) DUF1764 PF08576.10 NODE_34249_length_632_cov_389.465662_g27344_i0forward_frame_3 - 2.9 8.9 7.1 2.2 9.2 5.6 1.6 2 0 0 2 2 1 0 Eukaryotic protein of unknown function (DUF1764) VCBS PF13517.6 NODE_34231_length_633_cov_2.123746_g27333_i0reverse_frame_3 - 0.0012 19.4 8.4 0.4 11.3 0.1 3.2 2 1 1 3 3 3 3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella FG-GAP PF01839.23 NODE_34231_length_633_cov_2.123746_g27333_i0reverse_frame_3 - 0.017 15.3 2.7 3 8.0 0.1 3.2 3 0 0 3 3 3 0 FG-GAP repeat Cas6b_N PF17955.1 ORF99845 - 0.054 13.6 0.0 0.13 12.4 0.0 1.6 1 0 0 1 1 1 0 Cas6b N-terminal domain DHO_dh PF01180.21 ORF99345 - 4.4e-27 95.1 0.0 7.4e-27 94.3 0.0 1.3 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase DUSP PF06337.12 ORF98977 - 0.025 15.2 0.1 0.14 12.8 0.0 2.1 1 1 0 2 2 2 0 DUSP domain Snf7 PF03357.21 ORF98421 - 5.7e-15 55.3 25.8 7.9e-15 54.9 25.6 1.3 1 1 0 1 1 1 1 Snf7 UPF0261 PF06792.11 ORF98421 - 0.012 14.6 0.3 0.018 14.0 0.2 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0261) SirA PF10747.9 ORF98421 - 0.082 13.2 4.6 0.38 11.1 4.6 2.1 1 1 0 1 1 1 0 Sporulation inhibitor of replication protein SirA RibD_C PF01872.17 ORF97732 - 0.0042 16.9 2.1 0.0074 16.1 2.1 1.4 1 0 0 1 1 1 1 RibD C-terminal domain PAD PF03068.15 ORF97732 - 0.68 8.9 8.9 0.8 8.6 8.3 1.3 1 1 0 1 1 1 0 Protein-arginine deiminase (PAD) Peptidase_M1 PF01433.20 ORF95369 - 0.095 12.2 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 Peptidase family M1 domain DUF3584 PF12128.8 ORF93810 - 0.021 12.4 12.1 0.027 12.0 12.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Rootletin PF15035.6 ORF93810 - 0.027 14.5 4.6 0.027 14.5 4.6 2.3 2 1 1 3 3 3 0 Ciliary rootlet component, centrosome cohesion Golgin_A5 PF09787.9 ORF93810 - 0.057 12.9 16.5 0.089 12.2 16.5 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF489 PF04356.12 ORF93810 - 0.089 12.8 1.2 0.13 12.3 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) TPR_MLP1_2 PF07926.12 ORF93810 - 0.097 12.7 18.7 0.21 11.7 18.7 1.5 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF4250 PF14056.6 ORF93810 - 0.34 10.9 9.6 0.98 9.4 1.8 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) DUF5401 PF17380.2 ORF93810 - 0.49 8.4 14.4 0.6 8.1 14.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Phage_Mu_Gam PF07352.12 ORF93810 - 1 9.2 18.4 0.11 12.4 3.4 3.2 1 1 2 3 3 3 0 Bacteriophage Mu Gam like protein bZIP_1 PF00170.21 ORF93810 - 1.3 9.1 21.1 0.41 10.8 1.1 3.4 1 1 2 3 3 3 0 bZIP transcription factor GvpK PF05121.12 ORF93810 - 1.6 8.8 5.2 2.1 8.5 0.6 2.5 1 1 0 2 2 2 0 Gas vesicle protein K PIN_8 PF18476.1 ORF93810 - 1.7 8.4 16.4 3.7 7.4 0.1 2.3 1 1 1 2 2 2 0 PIN like domain Jnk-SapK_ap_N PF09744.9 ORF93810 - 2.1 8.6 20.8 5.5 7.2 20.8 1.8 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Uso1_p115_C PF04871.13 ORF93810 - 3.2 8.2 21.7 13 6.2 21.7 1.9 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region YlqD PF11068.8 ORF93810 - 3.4 8.0 16.5 15 5.9 13.3 2.4 1 1 1 2 2 2 0 YlqD protein zf-RING_2 PF13639.6 ORF9275 - 1.4e-11 44.6 14.2 1.4e-11 44.6 14.2 2.8 2 1 0 2 2 1 1 Ring finger domain Spec3 PF15795.5 ORF9275 - 2.5e-11 44.0 9.8 3e-10 40.5 9.8 2.3 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein zf-C3HC4_2 PF13923.6 ORF9275 - 7.8e-09 35.2 13.6 7.8e-09 35.2 13.6 2.7 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF9275 - 1.6e-07 31.5 9.7 1.6e-07 31.5 9.7 2.5 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF9275 - 1e-06 28.5 15.6 1e-06 28.5 15.6 3.1 3 1 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF9275 - 1.4e-06 28.1 14.4 1.4e-06 28.1 14.4 3.0 2 1 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF9275 - 3.2e-06 27.0 6.8 3.2e-06 27.0 6.8 2.3 2 0 0 2 2 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF9275 - 1.2e-05 25.2 12.8 1.2e-05 25.2 12.8 2.8 3 1 0 3 3 3 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF9275 - 4.8e-05 23.0 6.2 4.8e-05 23.0 6.2 3.2 2 1 1 3 3 2 1 RING-like zinc finger zf-C3HC4_4 PF15227.6 ORF9275 - 0.004 17.3 12.2 0.004 17.3 12.2 2.8 3 0 0 3 3 2 1 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF9275 - 0.0044 17.0 1.8 0.0044 17.0 1.8 2.0 2 0 0 2 2 2 1 Baculovirus U-box/Ring-like domain zf-ANAPC11 PF12861.7 ORF9275 - 0.0055 16.7 4.5 0.0055 16.7 4.5 2.1 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger DUF2750 PF11042.8 ORF91995 - 0.045 13.8 0.0 0.081 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2750) WD40 PF00400.32 ORF91172 - 5.6e-14 52.3 7.9 0.003 18.4 0.1 5.1 5 0 0 5 5 5 4 WD domain, G-beta repeat WD40_like PF17005.5 ORF91172 - 2.9e-08 33.4 9.1 3.7e-06 26.5 3.0 2.1 1 1 0 2 2 2 2 WD40-like domain ANAPC4_WD40 PF12894.7 ORF91172 - 3.7e-08 33.5 0.4 0.036 14.4 0.0 3.8 1 1 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain BBS2_Mid PF14783.6 ORF91172 - 0.0071 16.4 0.2 6.3 6.9 0.0 2.9 1 1 2 3 3 3 2 Ciliary BBSome complex subunit 2, middle region Kelch_2 PF07646.15 ORF91172 - 0.05 13.6 0.9 0.27 11.3 0.1 2.6 2 0 0 2 2 2 0 Kelch motif DUF2170 PF09938.9 ORF91172 - 0.1 12.3 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2170) BST2 PF16716.5 ORF90265 - 4.3e-05 24.0 7.9 4.3e-05 24.0 7.9 2.3 1 1 1 2 2 2 1 Bone marrow stromal antigen 2 Fez1 PF06818.15 ORF90265 - 6.1e-05 23.6 15.0 6.1e-05 23.6 15.0 1.9 1 1 1 2 2 2 1 Fez1 DUF4201 PF13870.6 ORF90265 - 0.00043 20.0 16.6 0.0031 17.3 15.1 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) Spc7 PF08317.11 ORF90265 - 0.0007 18.6 14.4 0.0007 18.6 14.4 2.1 1 1 1 2 2 2 1 Spc7 kinetochore protein kleA_kleC PF17383.2 ORF90265 - 0.0012 19.1 11.6 0.013 15.9 3.8 2.4 1 1 1 2 2 2 1 Uncharacterized KorC regulated protein A Csm1_N PF18504.1 ORF90265 - 0.0014 18.9 20.7 0.83 10.0 3.7 4.4 1 1 2 4 4 4 1 Csm1 N-terminal domain HMMR_N PF15905.5 ORF90265 - 0.0015 18.1 19.1 0.002 17.7 19.1 1.3 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal FlxA PF14282.6 ORF90265 - 0.002 18.1 14.0 0.002 18.1 14.0 2.5 1 1 2 3 3 3 2 FlxA-like protein ATG16 PF08614.11 ORF90265 - 0.0024 18.1 22.1 0.015 15.6 10.3 2.2 1 1 1 2 2 2 1 Autophagy protein 16 (ATG16) TACC_C PF05010.14 ORF90265 - 0.0028 17.5 16.5 0.006 16.4 16.3 1.8 1 1 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal AAA_13 PF13166.6 ORF90265 - 0.0033 16.1 8.6 0.0033 16.1 8.6 2.0 1 1 1 2 2 2 1 AAA domain Prefoldin PF02996.17 ORF90265 - 0.0051 16.7 4.0 0.0051 16.7 4.0 3.6 1 1 3 4 4 4 1 Prefoldin subunit Atg14 PF10186.9 ORF90265 - 0.0051 15.9 23.5 0.0075 15.4 9.3 2.1 1 1 1 2 2 2 1 Vacuolar sorting 38 and autophagy-related subunit 14 Paralemmin PF03285.15 ORF90265 - 0.0055 16.3 3.5 0.0055 16.3 3.5 2.1 1 1 1 2 2 2 1 Paralemmin YscO PF07321.12 ORF90265 - 0.0077 16.2 19.3 0.0077 16.2 19.3 1.5 1 1 0 1 1 1 1 Type III secretion protein YscO Tropomyosin_1 PF12718.7 ORF90265 - 0.0088 16.2 24.9 0.013 15.6 24.9 1.3 1 0 0 1 1 1 1 Tropomyosin like Fib_alpha PF08702.10 ORF90265 - 0.012 15.8 15.5 0.017 15.3 14.3 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Lebercilin PF15619.6 ORF90265 - 0.013 15.1 22.9 0.024 14.3 5.1 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Seryl_tRNA_N PF02403.22 ORF90265 - 0.019 15.2 20.3 0.12 12.6 10.4 2.4 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF641 PF04859.12 ORF90265 - 0.02 15.2 17.4 0.55 10.6 8.3 2.5 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Filament PF00038.21 ORF90265 - 0.023 14.3 19.3 0.12 11.9 8.3 2.1 1 1 1 2 2 2 0 Intermediate filament protein TMPIT PF07851.13 ORF90265 - 0.026 13.8 11.1 0.036 13.3 10.7 1.4 1 1 0 1 1 1 0 TMPIT-like protein Histone_HNS PF00816.21 ORF90265 - 0.029 15.2 11.2 0.029 15.2 11.2 2.9 1 1 1 2 2 2 0 H-NS histone family Golgin_A5 PF09787.9 ORF90265 - 0.04 13.4 21.4 0.052 13.0 21.4 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DHR10 PF18595.1 ORF90265 - 0.049 13.7 25.1 0.18 11.9 11.9 3.0 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain FUSC PF04632.12 ORF90265 - 0.055 12.0 2.5 0.058 11.9 2.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family HOOK PF05622.12 ORF90265 - 0.07 11.3 19.6 0.1 10.7 19.6 1.3 1 0 0 1 1 1 0 HOOK protein HCMV_UL139 PF12507.8 ORF90265 - 0.071 13.5 5.8 0.27 11.6 5.8 1.9 1 1 0 1 1 1 0 Human Cytomegalovirus UL139 protein DUF5082 PF16888.5 ORF90265 - 0.074 13.3 18.8 1.2 9.4 11.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) ADIP PF11559.8 ORF90265 - 0.079 13.0 19.2 0.22 11.6 16.0 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding ERM PF00769.19 ORF90265 - 0.08 12.8 23.7 0.36 10.6 23.8 1.8 1 1 0 1 1 1 0 Ezrin/radixin/moesin family HIP1_clath_bdg PF16515.5 ORF90265 - 0.088 13.4 15.9 4.5 8.0 9.2 2.9 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 HrpB7 PF09486.10 ORF90265 - 0.09 13.2 19.6 0.29 11.5 6.6 3.0 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) NPV_P10 PF05531.12 ORF90265 - 0.091 13.2 12.6 2.1 8.9 6.4 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein TMF_DNA_bd PF12329.8 ORF90265 - 0.091 12.8 19.6 0.37 10.8 8.3 2.9 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Mod_r PF07200.13 ORF90265 - 0.096 12.8 17.9 1.4 9.0 9.2 2.4 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein V-SNARE PF05008.15 ORF90265 - 0.11 12.9 13.3 0.049 14.0 9.4 2.5 1 1 2 3 3 1 0 Vesicle transport v-SNARE protein N-terminus Noelin-1 PF12308.8 ORF90265 - 0.11 12.5 4.6 0.076 13.0 1.7 2.1 1 1 1 2 2 2 0 Neurogenesis glycoprotein Wtap PF17098.5 ORF90265 - 0.11 12.4 10.1 0.089 12.7 4.8 2.3 1 1 1 2 2 2 0 WTAP/Mum2p family DUF2968 PF11180.8 ORF90265 - 0.12 12.0 16.0 0.18 11.5 16.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Sec16 PF12932.7 ORF90265 - 0.14 12.7 3.0 0.56 10.8 3.0 2.1 1 1 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region DUF3552 PF12072.8 ORF90265 - 0.15 11.5 24.8 0.45 9.9 6.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) DUF4407 PF14362.6 ORF90265 - 0.16 11.3 17.7 0.48 9.7 17.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4795 PF16043.5 ORF90265 - 0.17 11.5 14.2 0.27 10.8 14.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) FPP PF05911.11 ORF90265 - 0.29 9.3 17.0 0.32 9.1 17.0 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil CC2-LZ PF16516.5 ORF90265 - 0.29 11.5 17.2 0.22 11.9 6.9 3.2 1 1 3 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DivIC PF04977.15 ORF90265 - 0.29 10.9 24.4 0.43 10.4 1.8 3.5 1 1 2 3 3 3 0 Septum formation initiator HemX PF04375.14 ORF90265 - 0.3 10.3 16.2 0.23 10.7 1.5 2.1 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF2730 PF10805.8 ORF90265 - 0.31 11.2 9.4 0.14 12.2 2.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Prefoldin_2 PF01920.20 ORF90265 - 0.34 10.9 21.8 3.3 7.7 3.6 3.8 1 1 2 3 3 3 0 Prefoldin subunit Fmp27_WPPW PF10359.9 ORF90265 - 0.37 9.6 16.6 0.09 11.6 12.2 1.7 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain TolA_bind_tri PF16331.5 ORF90265 - 0.37 10.9 15.5 0.23 11.6 5.9 2.9 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF3138 PF11336.8 ORF90265 - 0.38 9.3 1.3 0.52 8.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) TMF_TATA_bd PF12325.8 ORF90265 - 0.46 10.7 18.6 0.067 13.4 11.2 2.4 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding Phage_GP20 PF06810.11 ORF90265 - 0.51 10.1 16.5 4.1 7.2 3.3 2.6 1 1 1 2 2 2 0 Phage minor structural protein GP20 Laminin_II PF06009.12 ORF90265 - 0.52 10.3 12.4 0.17 11.9 4.2 2.2 1 1 1 2 2 2 0 Laminin Domain II DUF3818 PF12825.7 ORF90265 - 0.62 9.0 9.5 0.85 8.6 9.5 1.2 1 0 0 1 1 1 0 Domain of unknown function in PX-proteins (DUF3818) DUF948 PF06103.11 ORF90265 - 0.62 10.4 4.2 2.2 8.6 4.1 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) LUC7 PF03194.15 ORF90265 - 0.64 9.6 12.5 0.84 9.2 12.5 1.2 1 0 0 1 1 1 0 LUC7 N_terminus DUF3584 PF12128.8 ORF90265 - 0.83 7.1 20.8 0.99 6.8 20.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) YkyA PF10368.9 ORF90265 - 0.96 9.1 20.0 2.1 8.0 19.5 1.8 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein RNA_pol_Rpb1_1 PF04997.12 ORF90265 - 0.97 8.7 8.4 1.5 8.1 8.4 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 1 DUF16 PF01519.16 ORF90265 - 0.99 9.9 16.9 0.99 9.9 6.2 2.4 1 1 1 2 2 2 0 Protein of unknown function DUF16 GrpE PF01025.19 ORF90265 - 1.1 9.0 18.8 2 8.0 5.9 2.4 1 1 1 2 2 2 0 GrpE Phage_GPO PF05929.11 ORF90265 - 1.1 8.9 10.0 2 8.0 10.0 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase BLOC1_2 PF10046.9 ORF90265 - 1.2 9.5 16.4 0.42 11.0 10.3 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 ORF90265 - 1.2 9.2 13.0 8.6 6.4 11.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Spectrin PF00435.21 ORF90265 - 1.2 9.6 18.2 1.4 9.4 9.0 2.4 1 1 1 2 2 2 0 Spectrin repeat DASH_Spc34 PF08657.10 ORF90265 - 1.4 8.6 18.0 0.56 10.0 14.7 1.8 1 1 1 2 2 2 0 DASH complex subunit Spc34 Prominin PF05478.11 ORF90265 - 1.4 6.8 7.7 1.8 6.5 7.7 1.1 1 0 0 1 1 1 0 Prominin UPF0242 PF06785.11 ORF90265 - 1.8 8.7 23.5 4.2 7.4 23.2 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Spc29 PF17082.5 ORF90265 - 2.1 8.1 15.6 2.4 8.0 6.5 2.2 1 1 1 2 2 2 0 Spindle Pole Component 29 DUF3450 PF11932.8 ORF90265 - 2.4 7.4 21.9 0.3 10.4 12.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) T3SSipB PF16535.5 ORF90265 - 2.6 8.5 13.5 3.8 8.0 12.6 1.6 1 1 1 2 2 2 0 Type III cell invasion protein SipB TPD52 PF04201.15 ORF90265 - 2.9 7.5 15.3 1.6 8.3 1.6 2.4 1 1 1 2 2 2 0 Tumour protein D52 family DUF2203 PF09969.9 ORF90265 - 3 8.6 14.7 0.4 11.4 5.1 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) CSN5_C PF18323.1 ORF90265 - 3.4 8.7 7.8 1.3e+02 3.6 7.8 2.3 1 1 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain USP8_interact PF08941.10 ORF90265 - 3.4 7.5 10.9 5.7 6.7 4.7 2.2 1 1 1 2 2 2 0 USP8 interacting Med9 PF07544.13 ORF90265 - 3.6 7.7 19.2 1.6 8.8 7.6 3.2 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF2937 PF11157.8 ORF90265 - 4.3 7.0 5.4 17 5.1 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2937) FliJ PF02050.16 ORF90265 - 4.4 7.5 23.9 8.1 6.7 20.8 2.4 1 1 1 2 2 2 0 Flagellar FliJ protein Vfa1 PF08432.10 ORF90265 - 4.8 7.5 13.7 6.7 7.0 13.7 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF4140 PF13600.6 ORF90265 - 5.4 7.5 21.7 6 7.4 2.2 3.5 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) Exonuc_VII_L PF02601.15 ORF90265 - 6.2 6.3 13.8 9.5 5.7 13.5 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit bZIP_1 PF00170.21 ORF90265 - 6.8 6.9 16.9 0.24 11.5 0.9 4.1 1 1 4 5 5 5 0 bZIP transcription factor DUF724 PF05266.14 ORF90265 - 6.8 6.5 20.3 0.26 11.1 9.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) APG6_N PF17675.1 ORF90265 - 7.1 7.2 25.8 69 4.0 24.3 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region Macoilin PF09726.9 ORF90265 - 8 4.9 16.6 9.7 4.6 16.6 1.1 1 0 0 1 1 1 0 Macoilin family ISG65-75 PF11727.8 ORF90265 - 8.5 5.5 17.8 0.32 10.2 9.5 1.9 1 1 1 2 2 2 0 Invariant surface glycoprotein FAM76 PF16046.5 ORF90265 - 9.2 5.5 17.2 0.6 9.4 5.4 2.1 1 1 1 2 2 2 0 FAM76 protein DUF4238 PF14022.6 ORF88874 - 0.043 13.3 12.8 0.064 12.8 12.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4238) V_ATPase_I PF01496.19 ORF88874 - 0.12 10.2 13.6 0.15 9.9 13.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FliD_N PF02465.18 ORF88874 - 0.57 10.9 6.7 1.9 9.2 5.1 2.4 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus PRKG1_interact PF15898.5 ORF88874 - 1.9 9.4 23.0 11 6.9 18.4 2.8 2 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain EF-G-binding_N PF07299.11 ORF88874 - 4.9 7.8 11.7 0.2 12.2 0.7 3.2 2 1 0 3 3 3 0 Elongation factor G-binding protein, N-terminal Ribosomal_L18A PF01775.17 ORF87243 - 0.043 13.9 1.1 0.043 13.9 1.1 1.9 2 0 0 2 2 2 0 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A ABC_tran_Xtn PF12848.7 ORF87243 - 0.11 12.5 4.7 0.14 12.2 2.9 2.1 1 1 1 2 2 2 0 ABC transporter YqzE PF14038.6 ORF87243 - 0.13 12.2 2.0 0.17 11.9 0.1 2.2 2 0 0 2 2 2 0 YqzE-like protein Phg_2220_C PF09524.10 ORF87243 - 0.72 10.0 6.3 1.4 9.1 0.3 3.4 2 1 1 3 3 3 0 Conserved phage C-terminus (Phg_2220_C) Cas_Csy1 PF09611.10 ORF86912 - 0.036 13.1 0.1 0.049 12.7 0.1 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) DUF1664 PF07889.12 ORF86912 - 0.046 13.8 4.1 0.083 12.9 0.5 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) FeoC PF09012.10 ORF86912 - 0.092 12.8 0.3 0.092 12.8 0.3 2.9 3 0 0 3 3 3 0 FeoC like transcriptional regulator TfuA PF07812.12 ORF86912 - 0.18 11.5 1.2 1.6 8.5 0.1 2.1 2 0 0 2 2 2 0 TfuA-like protein ATG16 PF08614.11 ORF86912 - 0.44 10.7 13.9 0.047 13.9 7.3 2.0 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF4140 PF13600.6 ORF86912 - 0.69 10.4 6.8 0.92 10.0 2.0 2.4 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) XkdW PF09636.10 ORF86912 - 0.81 9.8 3.0 14 5.9 0.7 2.3 2 0 0 2 2 2 0 XkdW protein ARGLU PF15346.6 ORF86912 - 0.9 9.4 9.9 0.092 12.6 1.1 2.3 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 zf-HC3 PF16827.5 ORF86912 - 4.2 7.7 9.0 4.4 7.6 0.8 2.4 1 1 1 2 2 2 0 zinc-finger CK2S PF15011.6 ORF86912 - 4.5 7.1 11.5 0.83 9.5 4.8 2.2 1 1 0 2 2 2 0 Casein Kinase 2 substrate YabA PF06156.13 ORF86912 - 5.8 7.6 6.2 11 6.7 2.1 2.4 2 1 0 2 2 2 0 Initiation control protein YabA SlyX PF04102.12 ORF86912 - 8.3 7.1 14.9 1.1 9.9 5.8 3.4 3 2 0 3 3 3 0 SlyX Trypan_PARP PF05887.11 ORF84528 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF84528 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter GRAM PF02893.20 ORF82563 - 0.44 10.4 3.3 10 6.0 0.1 2.4 2 0 0 2 2 2 0 GRAM domain PAN_4 PF14295.6 ORF8250 - 0.0075 16.2 2.9 0.0075 16.2 2.9 2.2 2 0 0 2 2 2 1 PAN domain PAN_1 PF00024.26 ORF8250 - 0.08 12.9 4.8 0.19 11.7 4.8 1.6 1 0 0 1 1 1 0 PAN domain TetR_C_4 PF08359.11 ORF80073 - 0.072 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region TRP PF06011.12 ORF79503 - 0.00056 18.8 3.9 0.00095 18.0 3.9 1.4 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF3099 PF11298.8 ORF79503 - 0.23 11.6 1.9 0.45 10.7 1.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) Tropomyosin PF00261.20 ORF79274 - 0.00022 20.7 9.1 0.00045 19.7 9.1 1.4 1 1 0 1 1 1 1 Tropomyosin Cep57_CLD PF14073.6 ORF79274 - 0.018 15.0 8.0 0.03 14.3 8.0 1.4 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 TolA_bind_tri PF16331.5 ORF79274 - 0.03 14.4 3.7 0.03 14.4 3.7 2.4 2 1 1 3 3 2 0 TolA binding protein trimerisation Med4 PF10018.9 ORF79274 - 0.032 13.9 12.5 0.26 10.9 3.0 2.3 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 HrpB7 PF09486.10 ORF79274 - 0.038 14.4 0.6 0.061 13.7 0.6 1.2 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) Nsp1_C PF05064.13 ORF79274 - 0.046 13.5 8.0 0.1 12.4 8.0 1.5 1 1 0 1 1 1 0 Nsp1-like C-terminal region DUF4407 PF14362.6 ORF79274 - 0.049 13.0 5.3 0.062 12.6 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3450 PF11932.8 ORF79274 - 0.049 12.9 7.8 0.077 12.3 7.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) PI3K_P85_iSH2 PF16454.5 ORF79274 - 0.071 12.7 15.0 0.62 9.7 6.2 2.2 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain MscS_porin PF12795.7 ORF79274 - 0.074 12.6 7.4 0.12 11.9 7.4 1.3 1 0 0 1 1 1 0 Mechanosensitive ion channel porin domain BST2 PF16716.5 ORF79274 - 0.093 13.3 10.4 0.77 10.4 1.3 2.6 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 ING PF12998.7 ORF79274 - 0.14 12.8 9.4 1.6 9.4 1.0 2.4 2 0 0 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding XLF PF09302.11 ORF79274 - 0.15 12.2 14.1 0.014 15.6 6.7 2.3 1 1 1 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component KapB PF08810.10 ORF79274 - 0.19 11.9 3.4 0.25 11.5 1.6 1.9 1 1 0 1 1 1 0 Kinase associated protein B DUF1664 PF07889.12 ORF79274 - 0.26 11.3 7.9 0.43 10.6 4.8 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) BRE1 PF08647.11 ORF79274 - 0.3 11.2 11.7 0.99 9.5 11.7 2.0 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase Exonuc_VII_L PF02601.15 ORF79274 - 0.36 10.4 8.1 0.37 10.3 7.9 1.2 1 1 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_3 PF13758.6 ORF79274 - 0.46 10.6 6.2 0.13 12.4 1.6 2.2 2 0 0 2 2 2 0 Prefoldin subunit DHR10 PF18595.1 ORF79274 - 0.6 10.2 11.3 1.2 9.2 11.3 1.5 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain Tropomyosin_1 PF12718.7 ORF79274 - 0.61 10.2 14.1 0.82 9.8 7.2 2.2 1 1 1 2 2 2 0 Tropomyosin like Histidinol_dh PF00815.20 ORF79274 - 0.7 8.8 4.4 0.79 8.7 1.7 1.9 1 1 1 2 2 2 0 Histidinol dehydrogenase CAP_N PF01213.19 ORF79274 - 0.86 9.0 7.5 1.2 8.6 7.5 1.4 1 1 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal CLZ PF16526.5 ORF79274 - 0.88 10.0 7.7 6.3 7.2 1.1 3.0 1 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ZYG-11_interact PF05884.12 ORF79274 - 0.91 8.9 3.9 9.6 5.5 0.8 2.1 2 0 0 2 2 2 0 Interactor of ZYG-11 Fzo_mitofusin PF04799.13 ORF79274 - 0.98 9.0 9.1 0.64 9.5 4.5 2.3 1 1 1 2 2 2 0 fzo-like conserved region OmpH PF03938.14 ORF79274 - 1.5 9.1 10.8 2.5 8.5 10.8 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF16 PF01519.16 ORF79274 - 6.3 7.4 12.4 2.9 8.4 3.1 2.4 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF4140 PF13600.6 ORF79274 - 6.5 7.3 6.3 3.7e+02 1.6 6.3 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) ABC_tran_CTD PF16326.5 ORF79274 - 7.5 6.9 8.7 15 5.9 5.2 2.6 1 1 1 2 2 2 0 ABC transporter C-terminal domain GrpE PF01025.19 ORF79274 - 9.5 5.9 13.0 9 5.9 4.3 2.2 1 1 1 2 2 2 0 GrpE DUF192 PF02643.15 ORF77933 - 3.7e-27 94.3 0.0 5.2e-27 93.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 DUF4100 PF13352.6 ORF75116 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) zf-RING_2 PF13639.6 ORF75007 - 5.6e-12 45.8 12.2 8.3e-12 45.3 12.2 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF75007 - 1.1e-10 41.1 4.7 1.1e-10 41.1 4.7 1.7 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF75007 - 9.4e-07 28.6 13.5 1.4e-06 28.1 13.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF75007 - 1.2e-06 28.6 13.9 5.5e-06 26.6 13.9 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF75007 - 1.3e-06 28.3 6.5 2.2e-06 27.6 6.5 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF75007 - 8.2e-06 25.7 11.7 1.2e-05 25.1 11.7 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF75007 - 1.1e-05 25.2 14.0 1.7e-05 24.5 14.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF75007 - 0.00046 20.0 10.4 0.00071 19.4 10.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF75007 - 0.0042 16.7 8.3 0.0073 15.9 8.3 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF75007 - 0.0082 16.0 11.3 0.014 15.2 11.3 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF75007 - 0.024 14.8 10.1 0.11 12.7 10.1 2.0 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF75007 - 0.034 14.2 7.5 0.23 11.6 7.5 2.1 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger SDA1 PF05285.12 ORF75007 - 0.095 12.1 13.1 0.13 11.6 13.1 1.2 1 0 0 1 1 1 0 SDA1 FANCL_C PF11793.8 ORF75007 - 0.26 11.5 10.0 3.1 8.0 10.0 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain Bindin PF02084.15 ORF75007 - 6.4 7.0 13.1 1.5 9.0 2.3 2.7 1 1 2 3 3 3 0 Bindin Ephrin_rec_like PF07699.13 ORF72038 - 0.045 13.5 0.2 0.082 12.7 0.2 1.4 1 0 0 1 1 1 0 Putative ephrin-receptor like Golgin_A5 PF09787.9 ORF7119 - 0.0023 17.5 15.8 0.0027 17.2 15.8 1.3 1 0 0 1 1 1 1 Golgin subfamily A member 5 DUF3584 PF12128.8 ORF7119 - 0.0095 13.5 14.4 0.01 13.4 14.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF489 PF04356.12 ORF7119 - 0.013 15.6 3.7 0.018 15.0 3.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) Rootletin PF15035.6 ORF7119 - 0.027 14.5 4.6 0.027 14.5 4.6 2.7 2 1 1 3 3 3 0 Ciliary rootlet component, centrosome cohesion DUF4250 PF14056.6 ORF7119 - 0.26 11.3 9.5 0.9 9.5 1.7 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) TPR_MLP1_2 PF07926.12 ORF7119 - 0.38 10.8 21.1 0.25 11.4 19.1 1.8 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF5401 PF17380.2 ORF7119 - 0.59 8.1 18.6 0.74 7.8 18.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF4407 PF14362.6 ORF7119 - 0.77 9.1 6.6 0.86 8.9 6.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Jnk-SapK_ap_N PF09744.9 ORF7119 - 1.2 9.3 21.8 2.4 8.3 5.7 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 bZIP_1 PF00170.21 ORF7119 - 1.4 9.0 21.7 0.37 10.9 0.9 3.4 1 1 2 3 3 3 0 bZIP transcription factor GvpK PF05121.12 ORF7119 - 1.7 8.7 5.2 2.1 8.5 0.6 2.4 1 1 0 2 2 2 0 Gas vesicle protein K Phage_Mu_Gam PF07352.12 ORF7119 - 2.7 7.9 20.7 0.17 11.8 4.0 3.4 1 1 2 3 3 3 0 Bacteriophage Mu Gam like protein Uso1_p115_C PF04871.13 ORF7119 - 5.6 7.4 23.4 34 4.8 23.3 2.3 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region YlqD PF11068.8 ORF7119 - 5.6 7.3 18.0 5.3 7.4 10.6 2.5 1 1 2 3 3 3 0 YlqD protein DUF1664 PF07889.12 ORF7119 - 7.5 6.6 14.7 10 6.2 2.9 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF4100 PF13352.6 ORF71046 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) Acyl_transf_1 PF00698.21 ORF70886 - 0.0029 17.1 0.0 0.0038 16.8 0.0 1.1 1 0 0 1 1 1 1 Acyl transferase domain Trypan_PARP PF05887.11 ORF68319 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF68319 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter RRM_1 PF00076.22 ORF68024 - 6.2e-06 25.9 0.0 1.3e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF4407 PF14362.6 ORF68024 - 0.019 14.3 15.5 0.025 13.9 15.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) RR_TM4-6 PF06459.12 ORF68024 - 1.6 8.5 12.4 2.1 8.1 12.4 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 ATP11 PF06644.11 ORF68024 - 4.9 6.9 9.9 7.4 6.3 9.9 1.3 1 0 0 1 1 1 0 ATP11 protein Dsh_C PF12316.8 ORF68024 - 7.7 6.9 10.4 11 6.4 10.4 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal ZapB PF06005.12 ORF67477 - 0.86 10.1 11.5 0.06 13.8 3.6 2.3 2 0 0 2 2 2 0 Cell division protein ZapB Nas2_N PF18265.1 ORF65942 - 1.1e-20 73.3 0.1 2.6e-20 72.1 0.1 1.6 1 0 0 1 1 1 1 Nas2 N_terminal domain PDZ_2 PF13180.6 ORF65942 - 4.4e-09 36.5 0.2 1.3e-08 35.1 0.0 1.8 2 0 0 2 2 2 1 PDZ domain PDZ_6 PF17820.1 ORF65942 - 4.2e-07 29.7 1.0 8.1e-07 28.8 0.1 2.0 3 0 0 3 3 3 1 PDZ domain PDZ PF00595.24 ORF65942 - 9.5e-06 25.9 0.1 2.6e-05 24.5 0.0 1.8 2 0 0 2 2 2 1 PDZ domain GRASP55_65 PF04495.14 ORF65942 - 9e-05 22.8 0.0 0.00019 21.8 0.0 1.5 2 0 0 2 2 2 1 GRASP55/65 PDZ-like domain CdvA PF18822.1 ORF65942 - 0.069 13.0 0.5 0.19 11.5 0.5 1.7 1 1 0 1 1 1 0 CdvA-like coiled-coil domain Pepdidase_M14_N PF18027.1 ORF65544 - 9.4e-13 48.5 0.4 3.7e-12 46.5 0.3 1.9 2 0 0 2 2 2 1 Cytosolic carboxypeptidase N-terminal domain Colipase-like PF15083.6 ORF65544 - 0.029 14.5 0.7 0.064 13.4 0.3 1.7 2 0 0 2 2 2 0 Colipase-like DUF29 PF01724.16 ORF65472 - 0.16 12.2 0.1 9.2 6.5 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function DUF29 cNMP_binding PF00027.29 ORF64595 - 3.4e-24 84.7 0.0 5.4e-24 84.1 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HTH_Crp_2 PF13545.6 ORF64595 - 4.1e-14 52.3 0.1 2.2e-13 50.0 0.0 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Crp PF00325.20 ORF64595 - 5e-09 35.7 0.1 9.2e-09 34.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family MarR_2 PF12802.7 ORF64595 - 0.00021 21.1 0.1 0.0012 18.7 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_23 PF13384.6 ORF64595 - 0.00048 19.8 0.0 0.0014 18.4 0.0 1.9 2 0 0 2 2 2 1 Homeodomain-like domain RepL PF05732.11 ORF64595 - 0.0012 18.3 0.1 0.16 11.4 0.1 2.3 2 0 0 2 2 2 1 Firmicute plasmid replication protein (RepL) HTH_36 PF13730.6 ORF64595 - 0.0014 18.6 0.0 0.0068 16.3 0.0 2.1 3 0 0 3 3 3 1 Helix-turn-helix domain MarR PF01047.22 ORF64595 - 0.0079 16.1 0.1 0.029 14.3 0.1 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 ORF64595 - 0.0087 15.6 0.2 0.023 14.2 0.2 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 ORF64595 - 0.019 14.5 0.7 0.057 12.9 0.2 2.0 3 0 0 3 3 3 0 Sigma-70, region 4 HTH_7 PF02796.15 ORF64595 - 0.062 13.4 0.1 0.23 11.5 0.1 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Rrf2 PF02082.20 ORF64595 - 0.074 13.4 0.1 0.85 10.0 0.0 2.3 2 0 0 2 2 2 0 Transcriptional regulator HTH_11 PF08279.12 ORF64595 - 0.1 12.5 0.3 0.24 11.4 0.1 1.8 2 0 0 2 2 2 0 HTH domain HTH_38 PF13936.6 ORF64595 - 0.12 12.1 0.2 0.47 10.2 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain DUF4868 PF16162.5 ORF64595 - 0.13 12.2 0.0 0.31 10.9 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4868) HhH-GPD PF00730.25 ORF64595 - 0.14 12.7 0.0 0.22 12.0 0.0 1.4 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein RPA_C PF08784.11 ORF64595 - 0.16 12.6 0.1 0.33 11.6 0.1 1.5 1 0 0 1 1 1 0 Replication protein A C terminal RRM_1 PF00076.22 ORF6279 - 1.8e-11 43.7 0.0 3.8e-11 42.7 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) S4_2 PF13275.6 ORF62277 - 6.1e-23 80.4 0.0 7.9e-23 80.1 0.0 1.2 1 0 0 1 1 1 1 S4 domain ECH_1 PF00378.20 ORF61400 - 3.2e-05 23.4 0.1 4.6e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase GRAM PF02893.20 ORF60203 - 0.31 10.9 3.0 10 6.0 0.1 2.5 2 0 0 2 2 2 0 GRAM domain PARP PF00644.20 ORF5879 - 1.4e-08 34.6 0.1 2.2e-08 33.9 0.1 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain UCH PF00443.29 ORF57033 - 0.0014 18.2 1.0 0.0024 17.4 1.0 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase EF-hand_1 PF00036.32 ORF57033 - 0.056 13.0 0.0 0.14 11.7 0.0 1.8 1 0 0 1 1 1 0 EF hand DUF3914 PF13053.6 ORF57033 - 0.066 13.6 0.5 0.33 11.3 0.0 2.3 3 1 0 3 3 3 0 Protein of unknown function (DUF3914) EF-hand_6 PF13405.6 ORF57033 - 0.073 13.0 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain Kinesin PF00225.23 ORF56909 - 4.2e-40 137.7 1.3 4.8e-40 137.5 1.3 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF56909 - 1.1e-18 67.6 0.9 1.5e-18 67.1 0.9 1.2 1 0 0 1 1 1 1 Microtubule binding Pepdidase_M14_N PF18027.1 ORF53971 - 9.4e-13 48.5 0.4 3.7e-12 46.5 0.3 1.9 2 0 0 2 2 2 1 Cytosolic carboxypeptidase N-terminal domain Colipase-like PF15083.6 ORF53971 - 0.029 14.5 0.7 0.064 13.4 0.3 1.7 2 0 0 2 2 2 0 Colipase-like UCH PF00443.29 ORF53615 - 0.0014 18.2 1.0 0.0024 17.4 1.0 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase EF-hand_1 PF00036.32 ORF53615 - 0.056 13.0 0.0 0.14 11.7 0.0 1.8 1 0 0 1 1 1 0 EF hand DUF3914 PF13053.6 ORF53615 - 0.066 13.6 0.5 0.33 11.3 0.0 2.3 3 1 0 3 3 3 0 Protein of unknown function (DUF3914) EF-hand_6 PF13405.6 ORF53615 - 0.073 13.0 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain UCH PF00443.29 ORF52902 - 0.0014 18.2 1.0 0.0024 17.4 1.0 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase EF-hand_1 PF00036.32 ORF52902 - 0.056 13.0 0.0 0.14 11.7 0.0 1.8 1 0 0 1 1 1 0 EF hand DUF3914 PF13053.6 ORF52902 - 0.066 13.6 0.5 0.33 11.3 0.0 2.3 3 1 0 3 3 3 0 Protein of unknown function (DUF3914) EF-hand_6 PF13405.6 ORF52902 - 0.073 13.0 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain Seadorna_VP7 PF07387.11 ORF49988 - 0.095 11.7 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 CSD PF00313.22 ORF48601 - 5.1e-13 48.7 0.3 4.2e-07 29.7 0.1 2.3 2 0 0 2 2 2 2 'Cold-shock' DNA-binding domain S1-like PF14444.6 ORF48601 - 0.0023 17.8 0.5 0.28 11.2 0.1 2.4 2 0 0 2 2 2 2 S1-like Cu_bind_like PF02298.17 ORF48601 - 0.051 13.6 0.0 0.13 12.3 0.0 1.6 2 0 0 2 2 2 0 Plastocyanin-like domain OB_RNB PF08206.11 ORF48601 - 0.11 12.2 3.5 0.44 10.3 0.7 2.4 2 1 0 2 2 2 0 Ribonuclease B OB domain TBCA PF02970.16 ORF43323 - 0.024 15.0 7.9 0.058 13.7 7.9 1.7 1 1 0 1 1 1 0 Tubulin binding cofactor A AAA_11 PF13086.6 ORF43323 - 0.025 14.4 3.9 0.031 14.1 3.9 1.1 1 0 0 1 1 1 0 AAA domain EntA_Immun PF08951.10 ORF43323 - 0.082 13.3 0.6 0.14 12.6 0.6 1.4 1 0 0 1 1 1 0 Enterocin A Immunity DUF2204 PF09970.9 ORF43323 - 0.094 12.4 1.1 0.16 11.6 1.0 1.4 1 1 0 1 1 1 0 Nucleotidyl transferase of unknown function (DUF2204) HSP70 PF00012.20 ORF43323 - 0.27 9.4 5.2 0.34 9.0 5.2 1.1 1 0 0 1 1 1 0 Hsp70 protein DUF745 PF05335.13 ORF43323 - 0.28 10.9 14.0 0.045 13.5 9.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF745) ERM PF00769.19 ORF43323 - 0.35 10.6 13.8 0.14 12.0 11.4 1.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Exonuc_VII_L PF02601.15 ORF43323 - 1.5 8.3 10.2 3 7.3 10.1 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit TRP PF06011.12 ORF43216 - 3.4e-05 22.8 4.5 4.9e-05 22.2 4.5 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel MLANA PF14991.6 ORF43216 - 0.068 13.4 0.1 0.13 12.6 0.1 1.5 1 1 0 1 1 1 0 Protein melan-A TMEM192 PF14802.6 ORF43216 - 0.085 11.9 2.8 0.087 11.9 0.6 1.9 1 1 2 3 3 3 0 TMEM192 family Bac_export_2 PF01312.19 ORF43216 - 0.45 9.7 3.2 0.62 9.2 1.8 1.8 1 1 1 2 2 2 0 FlhB HrpN YscU SpaS Family Cadherin_C_2 PF16492.5 ORF43216 - 0.75 10.6 2.9 2.2 9.1 0.6 2.5 2 2 0 2 2 2 0 Cadherin cytoplasmic C-terminal O-FucT PF10250.9 ORF42442 - 2.4e-12 47.2 0.0 2.7e-12 47.1 0.0 1.1 1 0 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase DUF4051 PF13260.6 ORF41252 - 2.6 7.9 4.2 6.3 6.6 4.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) DSPc PF00782.20 ORF37847 - 1.1e-34 119.1 0.1 1.1e-34 119.1 0.1 1.6 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF37847 - 1.8e-05 24.5 1.1 4.2e-05 23.2 0.0 1.9 2 0 0 2 2 2 1 Protein-tyrosine phosphatase Ribosomal_S2 PF00318.20 ORF37847 - 0.0057 15.9 0.8 0.014 14.7 0.8 1.7 1 1 0 1 1 1 1 Ribosomal protein S2 Complex1_30kDa PF00329.19 ORF37268 - 5.6e-10 39.9 0.0 1.1e-09 39.0 0.0 1.5 1 1 1 2 2 2 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Toxin_23 PF08093.11 ORF3646 - 0.73 10.0 8.6 4.1 7.6 0.4 3.5 3 0 0 3 3 3 0 Magi 5 toxic peptide family OapA_N PF08525.11 ORF36102 - 0.63 10.1 2.9 3.3 7.8 0.1 2.4 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif TRP PF06011.12 ORF35608 - 3.1e-05 22.9 4.3 4.3e-05 22.4 4.3 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel MLANA PF14991.6 ORF35608 - 0.071 13.4 0.2 0.13 12.6 0.1 1.5 1 1 0 1 1 1 0 Protein melan-A TMEM192 PF14802.6 ORF35608 - 0.085 11.9 2.8 0.087 11.9 0.6 1.9 1 1 2 3 3 3 0 TMEM192 family Bac_export_2 PF01312.19 ORF35608 - 0.48 9.6 3.2 0.62 9.2 1.8 1.8 1 1 1 2 2 2 0 FlhB HrpN YscU SpaS Family Cadherin_C_2 PF16492.5 ORF35608 - 0.81 10.5 3.0 2.1 9.1 0.7 2.6 2 2 0 2 2 2 0 Cadherin cytoplasmic C-terminal Peptidase_C97 PF05903.14 ORF343 - 0.012 15.5 0.8 0.019 14.8 0.8 1.5 1 1 0 1 1 1 0 PPPDE putative peptidase domain LRAT PF04970.13 ORF343 - 0.066 13.5 0.4 0.066 13.5 0.4 1.8 2 0 0 2 2 2 0 Lecithin retinol acyltransferase DUF4744 PF15918.5 ORF34296 - 0.51 11.2 4.3 2.1 9.2 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4744) DUF4100 PF13352.6 ORF3385 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) DUF2070 PF09843.9 ORF31342 - 0.56 8.4 8.0 0.71 8.1 8.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2626 PF11117.8 ORF31342 - 6.3 7.6 7.8 0.61 10.9 0.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2626) Caleosin PF05042.13 ORF27906 - 0.085 12.8 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Caleosin related protein DUF1048 PF06304.11 ORF26352 - 0.059 13.8 2.4 0.29 11.6 0.0 2.8 2 2 1 3 3 3 0 Protein of unknown function (DUF1048) Sugar_tr PF00083.24 ORF24039 - 2e-26 92.9 10.6 2.5e-26 92.5 10.6 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF24039 - 3e-10 39.6 15.3 4.9e-10 38.9 14.9 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF24039 - 0.0081 14.5 2.6 0.015 13.7 2.6 1.5 1 1 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family NqrM PF04400.13 ORF24039 - 0.057 13.2 0.2 0.11 12.3 0.2 1.4 1 0 0 1 1 1 0 (Na+)-NQR maturation NqrM DUF4100 PF13352.6 ORF22074 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) T3SSipB PF16535.5 ORF1937 - 0.0028 18.1 2.2 0.0044 17.5 2.2 1.3 1 1 0 1 1 1 1 Type III cell invasion protein SipB CK2S PF15011.6 ORF1937 - 0.0037 17.2 9.7 0.0042 17.0 6.3 2.4 1 1 1 2 2 2 1 Casein Kinase 2 substrate DUF1664 PF07889.12 ORF1937 - 0.0045 17.0 3.9 0.14 12.2 0.4 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) RNA12 PF10443.9 ORF1937 - 0.0082 14.9 2.6 0.0097 14.7 2.6 1.1 1 0 0 1 1 1 1 RNA12 protein Prominin PF05478.11 ORF1937 - 0.018 13.0 1.0 0.022 12.7 1.0 1.2 1 0 0 1 1 1 0 Prominin MCPsignal PF00015.21 ORF1937 - 0.023 14.5 4.5 1 9.1 0.5 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain GAS PF13851.6 ORF1937 - 0.049 13.0 7.2 0.084 12.2 6.8 1.7 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding BAR PF03114.18 ORF1937 - 0.13 11.9 4.8 0.17 11.5 4.8 1.2 1 0 0 1 1 1 0 BAR domain AAA_13 PF13166.6 ORF1937 - 0.17 10.5 4.2 0.18 10.5 3.5 1.3 1 1 0 1 1 1 0 AAA domain KxDL PF10241.9 ORF1937 - 0.19 12.1 4.5 6.5 7.1 0.5 2.8 1 1 2 3 3 3 0 Uncharacterized conserved protein ArAE_2_N PF10337.9 ORF1937 - 0.27 10.2 1.0 0.32 10.0 1.0 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal HMMR_N PF15905.5 ORF1937 - 0.28 10.6 10.5 0.28 10.6 7.0 1.9 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF5082 PF16888.5 ORF1937 - 0.39 11.0 7.6 0.19 12.0 4.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF948 PF06103.11 ORF1937 - 0.41 10.9 1.5 6.9 7.0 0.3 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Spc7 PF08317.11 ORF1937 - 0.56 9.0 12.1 1.6 7.5 12.3 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein AAA_32 PF13654.6 ORF1937 - 0.57 8.9 8.6 2.4 6.9 8.7 1.7 1 1 0 1 1 1 0 AAA domain DUF883 PF05957.13 ORF1937 - 0.7 10.5 7.3 1.6 9.3 3.2 2.6 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) Apolipoprotein PF01442.18 ORF1937 - 1.7 8.5 15.9 0.47 10.3 7.4 2.0 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain DUF641 PF04859.12 ORF1937 - 2.4 8.5 8.7 8.8 6.7 0.8 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) PRKG1_interact PF15898.5 ORF1937 - 3.8 8.5 11.7 0.57 11.1 4.0 2.3 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Exonuc_VII_L PF02601.15 ORF1937 - 6.5 6.2 10.4 12 5.3 10.5 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit TAXi_N PF14543.6 ORF16952 - 0.73 10.0 5.6 1.1 9.4 5.6 1.3 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal Glyco_transf_24 PF18404.1 ORF16579 - 3.1e-28 98.9 2.9 4.2e-28 98.5 2.9 1.1 1 0 0 1 1 1 1 Glucosyltransferase 24 Trypan_PARP PF05887.11 ORF1518 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF1518 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Spc7_N PF15402.6 ORF150400 - 0.3 9.3 1.8 0.33 9.1 1.8 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 Trypan_PARP PF05887.11 ORF150205 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF150205 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter MRAP PF15183.6 ORF147951 - 0.0098 15.8 0.1 0.02 14.8 0.1 1.5 1 0 0 1 1 1 1 Melanocortin-2 receptor accessory protein family SID-1_RNA_chan PF13965.6 ORF147951 - 0.023 13.1 1.2 0.023 13.1 1.2 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 TMEM107 PF14995.6 ORF147951 - 0.028 14.9 0.0 0.047 14.1 0.0 1.4 1 0 0 1 1 1 0 Transmembrane protein DUF2207 PF09972.9 ORF147951 - 0.029 13.2 3.9 0.034 12.9 3.7 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) AnmK PF03702.14 ORF147951 - 0.033 13.3 0.0 0.042 12.9 0.0 1.1 1 0 0 1 1 1 0 Anhydro-N-acetylmuramic acid kinase T2SSF PF00482.23 ORF147951 - 0.16 11.9 0.6 0.28 11.1 0.6 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F DUF3899 PF13038.6 ORF147951 - 0.21 12.1 4.1 3.9 8.0 2.0 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3899) DUF2116 PF09889.9 ORF147951 - 0.36 10.9 2.2 0.76 9.8 2.2 1.6 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF1788 PF08747.11 ORF147951 - 2 8.4 6.1 1.8 8.6 1.6 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF1788) BacA PF02673.18 ORF146496 - 0.036 13.8 2.1 0.047 13.4 2.1 1.2 1 0 0 1 1 1 0 Bacitracin resistance protein BacA COX4_pro PF03626.14 ORF146496 - 0.037 14.5 2.0 0.037 14.5 2.0 2.5 2 1 0 2 2 2 0 Prokaryotic Cytochrome C oxidase subunit IV DUF5588 PF17826.1 ORF146427 - 0.47 9.3 1.7 0.65 8.8 1.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5588) MAP65_ASE1 PF03999.12 ORF146427 - 2.5 6.7 5.8 3.2 6.3 5.8 1.1 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Peptidase_C8 PF03569.13 ORF146019 - 0.015 14.8 0.7 0.022 14.3 0.7 1.3 1 0 0 1 1 1 0 Peptidase family C8 PriC PF07445.12 ORF143801 - 0.0038 17.2 1.4 0.005 16.8 1.4 1.2 1 0 0 1 1 1 1 Primosomal replication protein priC Myb_DNA-bind_2 PF08914.11 ORF143354 - 0.045 13.9 1.2 0.096 12.9 0.1 2.0 1 1 1 2 2 2 0 Rap1 Myb domain NUDIX PF00293.28 ORF14222 - 3.4e-13 49.8 0.0 5.5e-13 49.1 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain Elf1 PF05129.13 ORF140495 - 0.091 12.8 3.5 10 6.3 0.1 3.2 3 0 0 3 3 3 0 Transcription elongation factor Elf1 like zf_PR_Knuckle PF18445.1 ORF140495 - 0.37 10.7 5.0 16 5.4 0.2 3.4 3 0 0 3 3 3 0 PR zinc knuckle motif U71 PF17474.2 ORF140495 - 1.2 9.1 8.8 3.5 7.6 0.9 3.6 3 1 0 3 3 3 0 Tegument protein UL11 homolog Stc1 PF12898.7 ORF140495 - 2.6 8.6 7.3 2.7 8.6 1.7 3.2 2 1 1 3 3 3 0 Stc1 domain Trypan_PARP PF05887.11 ORF139851 - 0.3 11.0 1.7 0.42 10.6 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Zip PF02535.22 ORF139851 - 0.33 10.1 0.5 0.3 10.3 0.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter zf-RING_2 PF13639.6 ORF138521 - 1.8e-12 47.4 10.7 2.5e-12 46.9 10.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF138521 - 2.6e-07 30.8 8.1 4.9e-07 29.9 8.1 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF138521 - 1.5e-06 27.9 10.8 2.7e-06 27.1 10.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF138521 - 3.6e-06 26.6 5.8 6.3e-06 25.8 5.8 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF138521 - 1.1e-05 25.3 8.9 1.6e-05 24.8 8.9 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF138521 - 1.6e-05 24.6 10.2 2.9e-05 23.8 10.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF138521 - 3.7e-05 23.7 8.2 7e-05 22.8 8.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF138521 - 0.00011 22.2 3.6 0.00018 21.5 3.6 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF138521 - 0.00049 19.9 5.4 0.00082 19.2 5.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF138521 - 0.00094 18.8 7.7 0.0018 17.9 7.7 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF138521 - 0.0044 16.8 9.3 0.02 14.7 8.9 2.0 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF138521 - 0.021 15.0 5.0 0.047 13.9 5.0 1.6 1 0 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 ORF138521 - 0.057 13.6 6.8 0.13 12.4 6.7 1.7 1 1 0 1 1 1 0 RING-variant domain DUF2076 PF09849.9 ORF138521 - 0.3 11.1 10.1 0.087 12.9 0.4 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2076) zf-RING_4 PF14570.6 ORF138521 - 8.2 6.3 10.3 16 5.4 9.6 1.8 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain Adeno_knob PF00541.17 ORF138460 - 0.021 14.5 0.0 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 Adenoviral fibre protein (knob domain) DUF5592 PF17332.2 ORF137507 - 7.7 7.2 8.4 0.77 10.4 1.0 2.9 2 1 2 4 4 4 0 Family of unknown function (DUF5592) BTB PF00651.31 ORF132254 - 0.098 12.9 0.2 0.18 12.0 0.0 1.6 2 0 0 2 2 2 0 BTB/POZ domain Ras PF00071.22 ORF12859 - 1.4e-55 187.4 0.2 1.6e-55 187.1 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF12859 - 2.8e-31 108.2 0.0 5.2e-31 107.4 0.0 1.4 2 0 0 2 2 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF12859 - 8.4e-18 64.4 0.0 1e-17 64.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF12859 - 2.8e-06 26.8 0.0 3.4e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF12859 - 6.1e-06 26.2 0.0 0.03 14.2 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1 PF01926.23 ORF12859 - 1e-05 25.6 0.0 1.6e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF12859 - 1.6e-05 24.5 0.0 6.5e-05 22.5 0.0 1.8 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF12859 - 2.5e-05 23.9 0.0 0.0001 21.9 0.0 1.8 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF12859 - 0.00042 19.8 0.1 0.00077 18.9 0.0 1.5 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF12859 - 0.0018 18.5 0.0 0.0035 17.6 0.0 1.7 1 1 0 1 1 1 1 AAA domain G-alpha PF00503.20 ORF12859 - 0.0084 15.3 1.3 1 8.4 0.0 2.5 1 1 1 3 3 3 1 G-protein alpha subunit PRK PF00485.18 ORF12859 - 0.011 15.5 0.2 0.029 14.1 0.0 1.9 2 1 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_24 PF13479.6 ORF12859 - 0.018 14.8 0.1 0.026 14.2 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF12859 - 0.02 15.3 0.0 0.03 14.7 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain ResIII PF04851.15 ORF12859 - 0.024 14.6 0.5 0.076 13.0 0.5 1.8 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Pox_A32 PF04665.12 ORF12859 - 0.032 13.7 0.0 0.16 11.4 0.0 2.0 2 0 0 2 2 2 0 Poxvirus A32 protein AAA_7 PF12775.7 ORF12859 - 0.049 13.1 0.0 0.084 12.4 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF12859 - 0.074 13.6 1.1 0.12 12.9 1.1 1.8 1 1 0 1 1 1 0 ABC transporter cobW PF02492.19 ORF12859 - 0.11 12.0 0.0 2.6 7.6 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 ORF12859 - 0.12 12.2 0.1 0.27 11.0 0.0 1.7 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_29 PF13555.6 ORF12859 - 0.14 11.9 0.0 0.32 10.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain TniB PF05621.11 ORF12859 - 0.14 11.5 0.0 0.32 10.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial TniB protein DNA_pol_E_B PF04042.16 ORF12859 - 0.18 11.1 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B UCH PF00443.29 ORF128036 - 0.0014 18.2 1.0 0.0024 17.4 1.0 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase EF-hand_1 PF00036.32 ORF128036 - 0.056 13.0 0.0 0.14 11.7 0.0 1.8 1 0 0 1 1 1 0 EF hand DUF3914 PF13053.6 ORF128036 - 0.066 13.6 0.5 0.33 11.3 0.0 2.3 3 1 0 3 3 3 0 Protein of unknown function (DUF3914) EF-hand_6 PF13405.6 ORF128036 - 0.073 13.0 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain Ion_trans PF00520.31 ORF128028 - 2.6e-05 23.6 13.4 3.8e-05 23.0 13.4 1.3 1 0 0 1 1 1 1 Ion transport protein Na_Ca_ex PF01699.24 ORF128028 - 0.033 14.2 9.5 0.053 13.5 9.5 1.3 1 0 0 1 1 1 0 Sodium/calcium exchanger protein DUF4191 PF13829.6 ORF128028 - 0.51 9.6 2.9 0.89 8.9 2.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4191) DUF4199 PF13858.6 ORF128028 - 1 9.8 11.4 0.18 12.2 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) Pox_P21 PF05313.12 ORF128028 - 1.4 8.4 9.1 0.12 12.0 1.5 2.1 1 1 1 2 2 2 0 Poxvirus P21 membrane protein MARVEL PF01284.23 ORF128028 - 2.7 8.0 9.8 3.6 7.6 1.0 2.2 1 1 0 2 2 2 0 Membrane-associating domain Herpes_LMP1 PF05297.11 ORF128028 - 5 6.2 7.1 5.9 6.0 7.1 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) RibD_C PF01872.17 ORF127942 - 0.0042 16.9 2.1 0.0074 16.1 2.1 1.4 1 0 0 1 1 1 1 RibD C-terminal domain PAD PF03068.15 ORF127942 - 0.68 8.9 8.9 0.8 8.6 8.3 1.3 1 1 0 1 1 1 0 Protein-arginine deiminase (PAD) SRP_SPB PF02978.19 ORF126355 - 2.4 8.8 9.4 0.11 13.1 3.2 1.9 2 0 0 2 2 2 0 Signal peptide binding domain Med26_M PF15694.5 ORF126355 - 4.2 7.4 23.6 0.39 10.7 1.3 2.0 1 1 1 2 2 2 0 Mediator complex subunit 26 middle domain zf-RING_2 PF13639.6 ORF126311 - 8.6e-12 45.2 16.7 2.5e-11 43.7 12.6 2.7 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF126311 - 5.9e-07 29.7 12.5 5.9e-07 29.7 12.5 2.6 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF126311 - 2.2e-06 27.4 17.0 4.2e-06 26.5 11.6 2.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF126311 - 5e-06 26.2 11.2 5e-06 26.2 11.2 2.4 3 0 0 3 3 2 1 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF126311 - 6.4e-06 26.1 3.8 1.9e-05 24.6 3.8 1.9 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF126311 - 1.1e-05 25.2 12.2 1.1e-05 25.2 12.2 2.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF126311 - 0.00014 21.7 11.0 0.0013 18.5 9.3 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF126311 - 0.00092 19.1 12.2 0.00092 19.1 12.2 2.6 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF126311 - 0.0032 17.5 7.9 0.0032 17.5 7.9 2.9 2 1 0 2 2 2 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF126311 - 0.0065 16.1 9.0 0.0065 16.1 9.0 2.0 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF126311 - 0.022 14.9 12.2 1.8 8.8 12.2 3.1 1 1 0 1 1 1 0 FANCL C-terminal domain FAM219A PF15260.6 ORF126311 - 0.086 13.2 0.3 0.14 12.5 0.3 1.2 1 0 0 1 1 1 0 Protein family FAM219A Zf_RING PF16744.5 ORF126311 - 0.29 11.3 8.9 0.57 10.3 7.3 2.2 2 0 0 2 2 2 0 KIAA1045 RING finger RINGv PF12906.7 ORF126311 - 1.4 9.1 11.8 5.5 7.2 11.8 2.1 1 0 0 1 1 1 0 RING-variant domain zf-RING_4 PF14570.6 ORF126311 - 8.9 6.2 16.1 2.8 7.8 11.2 2.5 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-CpG_bind_C PF12269.8 ORF126065 - 0.0079 16.0 2.4 0.0079 16.0 2.4 1.9 1 1 0 2 2 2 1 CpG binding protein zinc finger C terminal domain zf-TRAF PF02176.18 ORF126065 - 0.11 13.2 1.0 0.11 13.2 1.0 1.9 2 0 0 2 2 2 0 TRAF-type zinc finger DUF3721 PF12518.8 ORF125131 - 3.4 7.6 9.3 0.1 12.5 1.6 2.4 3 0 0 3 3 3 0 Protein of unknown function DUF4100 PF13352.6 ORF124464 - 0.012 15.4 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) TAXi_N PF14543.6 ORF122736 - 0.73 10.0 5.6 1.1 9.4 5.6 1.3 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal Myb_DNA-bind_2 PF08914.11 ORF120486 - 0.045 13.9 1.2 0.096 12.9 0.1 2.0 1 1 1 2 2 2 0 Rap1 Myb domain DUF373 PF04123.13 ORF119865 - 0.94 8.9 13.9 1.2 8.5 13.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) Herpes_LMP1 PF05297.11 ORF119865 - 1.8 7.6 7.2 2.1 7.4 7.2 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) O-antigen_lig PF13425.6 ORF119865 - 1.9 7.2 23.4 2.8 6.6 23.1 1.4 1 1 0 1 1 1 0 O-antigen ligase like membrane protein MARVEL PF01284.23 ORF119865 - 8.3 6.4 13.0 35 4.4 0.4 2.2 1 1 1 2 2 2 0 Membrane-associating domain Ribul_P_3_epim PF00834.19 ORF119348 - 1.4e-74 249.8 0.0 1.6e-74 249.6 0.0 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family TMP-TENI PF02581.17 ORF119348 - 0.11 11.8 0.1 0.16 11.2 0.1 1.3 1 0 0 1 1 1 0 Thiamine monophosphate synthase BPD_transp_1 PF00528.22 ORF117995 - 5.2e-29 101.3 12.0 7e-29 100.9 12.0 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DUF3638 PF12340.8 ORF117995 - 0.051 12.9 0.0 0.095 12.0 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3638) DUF3169 PF11368.8 ORF117995 - 0.87 9.0 4.3 1.6 8.1 4.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) SOGA PF11365.8 ORF115777 - 0.0035 18.4 2.2 0.0092 17.1 2.2 1.6 1 0 0 1 1 1 1 Protein SOGA Cep57_CLD_2 PF14197.6 ORF115777 - 0.027 14.5 1.6 0.027 14.5 1.6 1.9 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 HAP1_N PF04849.13 ORF115777 - 0.81 8.8 9.7 0.11 11.6 5.4 1.6 2 0 0 2 2 2 0 HAP1 N-terminal conserved region DUF3543 PF12063.8 ORF114415 - 0.0023 17.4 1.3 0.0023 17.4 1.3 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF3543) IZUMO PF15005.6 ORF114415 - 0.0031 18.1 4.6 0.0031 18.1 4.6 2.4 1 1 2 3 3 3 1 Izumo sperm-egg fusion, Ig domain-associated BssS PF13991.6 ORF114415 - 0.11 12.6 0.1 0.25 11.4 0.1 1.6 1 0 0 1 1 1 0 BssS protein family DUF3510 PF12022.8 ORF114415 - 0.12 12.8 6.7 0.23 11.8 6.0 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3510) TrbI_Ftype PF09677.10 ORF114415 - 0.18 12.1 0.2 0.47 10.8 0.0 1.7 2 0 0 2 2 2 0 Type-F conjugative transfer system protein (TrbI_Ftype) DALR_1 PF05746.15 ORF114415 - 0.43 10.8 8.3 6.8 6.9 1.3 2.9 1 1 2 3 3 3 0 DALR anticodon binding domain STAT_int PF02865.17 ORF114415 - 1.2 9.6 13.7 7.4 7.1 0.7 3.2 2 1 1 3 3 3 0 STAT protein, protein interaction domain CENP-O PF09496.10 ORF114415 - 1.3 8.9 7.4 1.9 8.4 5.8 2.1 1 1 1 2 2 2 0 Cenp-O kinetochore centromere component Goodbye PF17109.5 ORF114415 - 9.3 6.7 9.3 1 9.8 0.8 2.9 2 1 1 3 3 3 0 fungal STAND N-terminal Goodbye domain LMBR1 PF04791.16 ORF114415 - 9.3 5.0 10.5 13 4.5 10.5 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein FabA PF07977.13 ORF113796 - 1.3e-52 177.1 0.0 1.7e-52 176.7 0.0 1.1 1 0 0 1 1 1 1 FabA-like domain STALD PF18185.1 ORF113094 - 0.0071 15.7 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Sir2- and TIR-associating SLOG family DUF1770 PF08589.10 ORF112236 - 0.02 15.9 0.2 0.04 14.9 0.2 1.5 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1770) Toxin-deaminase PF14424.6 ORF107681 - 0.016 15.3 0.0 0.022 14.9 0.0 1.2 1 0 0 1 1 1 0 The BURPS668_1122 family of deaminases DHHC PF01529.20 ORF105518 - 2.8e-06 27.5 8.1 4.1e-06 26.9 8.1 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase Thx PF17070.5 ORF10457 - 0.00039 20.4 0.6 0.00082 19.4 0.3 1.7 2 0 0 2 2 2 1 30S ribosomal protein Thx RPS31 PF17067.5 ORF10457 - 0.029 14.5 0.2 0.052 13.7 0.2 1.4 1 0 0 1 1 1 0 Ribosomal protein S31e Lebercilin PF15619.6 ORF1044 - 0.00057 19.6 15.4 0.011 15.4 5.0 2.5 2 0 0 2 2 2 2 Ciliary protein causing Leber congenital amaurosis disease DNA_pol3_gamma3 PF12169.8 ORF1044 - 0.017 15.1 0.1 0.028 14.3 0.1 1.3 1 0 0 1 1 1 0 DNA polymerase III subunits gamma and tau domain III OKR_DC_1 PF01276.20 ORF1044 - 0.02 13.6 0.3 0.022 13.5 0.3 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Ribosomal_L29 PF00831.23 ORF1044 - 0.029 14.3 0.2 0.029 14.3 0.2 3.1 3 1 0 3 3 3 0 Ribosomal L29 protein SlyX PF04102.12 ORF1044 - 0.48 11.1 5.5 0.94 10.1 2.0 2.7 2 0 0 2 2 2 0 SlyX Fzo_mitofusin PF04799.13 ORF1044 - 1.1 8.8 11.7 2.8 7.5 2.1 2.3 2 0 0 2 2 2 0 fzo-like conserved region T3SSipB PF16535.5 ORF1044 - 1.3 9.5 7.3 1.1 9.7 2.5 2.2 1 1 0 2 2 2 0 Type III cell invasion protein SipB TMF_DNA_bd PF12329.8 ORF1044 - 3.1 7.8 17.7 0.22 11.5 3.8 3.1 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Latarcin PF10279.9 ORF1044 - 3.2 8.2 14.7 68 4.0 13.6 2.6 1 1 0 1 1 1 0 Latarcin precursor Noelin-1 PF12308.8 ORF1044 - 3.5 7.7 9.7 0.31 11.0 0.8 2.5 2 1 0 2 2 2 0 Neurogenesis glycoprotein TRAF_BIRC3_bd PF16673.5 ORF1044 - 4.6 7.1 12.0 0.08 12.7 1.2 3.1 3 1 1 4 4 4 0 TNF receptor-associated factor BIRC3 binding domain T3SSipB PF16535.5 ORF101917 - 0.0028 18.1 2.2 0.0044 17.5 2.2 1.3 1 1 0 1 1 1 1 Type III cell invasion protein SipB CK2S PF15011.6 ORF101917 - 0.0037 17.2 9.7 0.0042 17.0 6.3 2.4 1 1 1 2 2 2 1 Casein Kinase 2 substrate DUF1664 PF07889.12 ORF101917 - 0.0045 17.0 3.9 0.14 12.2 0.4 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) RNA12 PF10443.9 ORF101917 - 0.0082 14.9 2.6 0.0097 14.7 2.6 1.1 1 0 0 1 1 1 1 RNA12 protein Prominin PF05478.11 ORF101917 - 0.018 13.0 1.0 0.022 12.7 1.0 1.2 1 0 0 1 1 1 0 Prominin MCPsignal PF00015.21 ORF101917 - 0.023 14.5 4.5 1 9.1 0.5 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain GAS PF13851.6 ORF101917 - 0.049 13.0 7.2 0.084 12.2 6.8 1.7 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding BAR PF03114.18 ORF101917 - 0.13 11.9 4.8 0.17 11.5 4.8 1.2 1 0 0 1 1 1 0 BAR domain AAA_13 PF13166.6 ORF101917 - 0.17 10.5 4.2 0.18 10.5 3.5 1.3 1 1 0 1 1 1 0 AAA domain KxDL PF10241.9 ORF101917 - 0.19 12.1 4.5 6.5 7.1 0.5 2.8 1 1 2 3 3 3 0 Uncharacterized conserved protein ArAE_2_N PF10337.9 ORF101917 - 0.27 10.2 1.0 0.32 10.0 1.0 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal HMMR_N PF15905.5 ORF101917 - 0.28 10.6 10.5 0.28 10.6 7.0 1.9 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF5082 PF16888.5 ORF101917 - 0.39 11.0 7.6 0.19 12.0 4.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF948 PF06103.11 ORF101917 - 0.41 10.9 1.5 6.9 7.0 0.3 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Spc7 PF08317.11 ORF101917 - 0.56 9.0 12.1 1.6 7.5 12.3 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein AAA_32 PF13654.6 ORF101917 - 0.57 8.9 8.6 2.4 6.9 8.7 1.7 1 1 0 1 1 1 0 AAA domain DUF883 PF05957.13 ORF101917 - 0.7 10.5 7.3 1.6 9.3 3.2 2.6 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) Apolipoprotein PF01442.18 ORF101917 - 1.7 8.5 15.9 0.47 10.3 7.4 2.0 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain DUF641 PF04859.12 ORF101917 - 2.4 8.5 8.7 8.8 6.7 0.8 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) PRKG1_interact PF15898.5 ORF101917 - 3.8 8.5 11.7 0.57 11.1 4.0 2.3 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Exonuc_VII_L PF02601.15 ORF101917 - 6.5 6.2 10.4 12 5.3 10.5 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit Dus PF01207.17 ORF100395 - 0.00015 21.0 0.0 0.0003 20.0 0.0 1.4 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) SRAP PF02586.14 NODE_34619_length_625_cov_2.542373_g27673_i0forward_frame_1 - 1.2e-42 146.0 0.0 1.5e-42 145.6 0.0 1.1 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) Foamy_BEL PF03274.14 NODE_34619_length_625_cov_2.542373_g27673_i0forward_frame_1 - 0.0062 15.9 0.1 0.0082 15.5 0.1 1.2 1 0 0 1 1 1 1 Foamy virus BEL 1/2 protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks109.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks109.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks109.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks109.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 17:59:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4834 PF16118.5 ORF144292 - 0.71 10.9 3.6 0.93 10.5 1.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) RIFIN PF02009.16 ORF144292 - 0.75 9.6 7.2 0.36 10.7 4.4 1.9 1 1 0 1 1 1 0 Rifin Orf78 PF06024.12 ORF144292 - 5.6 7.3 7.7 0.79 10.1 2.3 2.3 1 1 1 2 2 2 0 Orf78 (ac78) Acyl-CoA_dh_M PF02770.19 ORF112852 - 1.6e-14 53.9 0.0 2.6e-14 53.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain ACOX PF01756.19 ORF112852 - 1.8e-11 43.9 0.2 3.5e-11 43.0 0.2 1.5 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_dh_1 PF00441.24 ORF112852 - 5.1e-07 30.0 0.1 4.6e-05 23.7 0.0 2.3 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Erf4 PF10256.9 ORF112852 - 0.11 12.6 0.5 5.4 7.2 0.0 2.9 2 1 1 3 3 3 0 Golgin subfamily A member 7/ERF4 family Suf PF05843.14 ORF112852 - 0.33 10.9 1.3 1.4 8.8 0.3 2.1 2 0 0 2 2 2 0 Suppressor of forked protein (Suf) Glyco_hydro_31 PF01055.26 ORF103604 - 6.7e-96 322.1 1.4 8.2e-96 321.9 1.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF103604 - 0.07 13.4 0.0 0.17 12.2 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) HSP90 PF00183.18 ORF9657 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF9657 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF9657 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF9657 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF9657 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) HSP90 PF00183.18 ORF82254 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF82254 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF82254 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF82254 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF82254 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) HSP90 PF00183.18 ORF81790 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF81790 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF81790 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF81790 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF81790 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) HSP90 PF00183.18 ORF7681 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF7681 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF7681 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF7681 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF7681 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) PKD_channel PF08016.12 ORF67938 - 8.4e-20 70.8 20.9 3.4e-17 62.2 19.1 2.9 2 1 0 2 2 2 2 Polycystin cation channel Ion_trans PF00520.31 ORF67938 - 7.1e-09 35.3 16.8 1.4e-08 34.3 16.8 1.4 1 0 0 1 1 1 1 Ion transport protein HSP90 PF00183.18 ORF64923 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF64923 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF64923 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF64923 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF64923 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) HSP90 PF00183.18 ORF63527 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF63527 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF63527 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF63527 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF63527 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) SRF-TF PF00319.18 ORF59591 - 3.7e-15 55.1 1.0 1e-14 53.7 1.0 1.8 1 0 0 1 1 1 1 SRF-type transcription factor (DNA-binding and dimerisation domain) SRF-TF PF00319.18 ORF53848 - 3.6e-15 55.2 1.0 1e-14 53.7 1.0 1.9 1 0 0 1 1 1 1 SRF-type transcription factor (DNA-binding and dimerisation domain) ABC_membrane_2 PF06472.15 ORF52380 - 6.2e-88 294.7 3.9 8.7e-88 294.2 3.9 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 ABC_tran PF00005.27 ORF52380 - 2.5e-18 66.9 0.0 1.3e-17 64.6 0.0 2.2 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF52380 - 3.1e-06 26.8 0.4 0.078 12.4 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF52380 - 0.00016 22.2 0.0 0.00051 20.6 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 ORF52380 - 0.0011 18.9 0.0 0.0029 17.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF52380 - 0.014 15.1 0.1 0.032 14.0 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATPase_2 PF01637.18 ORF52380 - 0.056 13.3 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Pkinase PF00069.25 ORF50617 - 8.9e-50 169.5 0.0 3e-49 167.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF50617 - 8e-38 130.2 0.0 2.3e-37 128.7 0.0 1.7 1 0 0 1 1 1 1 Protein tyrosine kinase OSR1_C PF12202.8 ORF50617 - 0.046 13.9 2.1 0.072 13.3 0.3 2.4 2 0 0 2 2 2 0 Oxidative-stress-responsive kinase 1 C-terminal domain HSP90 PF00183.18 ORF25485 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF25485 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF25485 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF25485 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF25485 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) PPL4 PF18188.1 ORF24752 - 0.0029 17.5 0.0 1.3 8.9 0.1 2.4 2 0 0 2 2 2 2 Prim-pol 4 SAM_3 PF18016.1 ORF24752 - 0.12 12.2 0.2 12 5.8 0.0 2.6 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) HSP90 PF00183.18 ORF15410 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF15410 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF15410 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF15410 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF15410 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) EF-hand_6 PF13405.6 ORF146099 - 1.1e-16 59.3 8.3 7.1e-05 22.4 0.0 6.9 7 0 0 7 7 7 4 EF-hand domain EF-hand_7 PF13499.6 ORF146099 - 3.5e-16 59.4 7.1 2.8e-06 27.7 0.0 4.5 5 0 0 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF146099 - 2.4e-14 51.7 8.6 7.5e-05 22.0 0.0 6.8 7 0 0 7 7 7 3 EF hand EF-hand_5 PF13202.6 ORF146099 - 2e-06 27.0 1.5 2.5e-05 23.5 0.1 2.9 2 0 0 2 2 2 1 EF hand SPARC_Ca_bdg PF10591.9 ORF146099 - 4.5e-06 27.0 0.2 0.021 15.1 0.0 2.8 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF146099 - 6.2e-05 22.8 10.1 0.038 13.8 0.1 4.5 5 1 1 6 6 6 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF146099 - 0.02 14.8 10.2 9.1 6.3 0.1 5.6 3 2 4 7 7 7 0 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF146099 - 0.05 13.9 0.6 3.5 8.0 0.0 2.7 2 0 0 2 2 2 0 EF-hand domain Lzipper-MIP1 PF14389.6 ORF146099 - 0.074 13.3 1.5 0.79 10.1 0.2 2.9 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 HSP90 PF00183.18 ORF14521 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF14521 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF14521 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF14521 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF14521 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) HSP90 PF00183.18 ORF11050 - 1.1e-194 648.1 47.1 1.5e-194 647.7 47.1 1.2 1 0 0 1 1 1 1 Hsp90 protein Feld-I_B PF09252.10 ORF11050 - 0.057 13.4 0.2 0.3 11.1 0.1 2.2 2 0 0 2 2 2 0 Allergen Fel d I-B chain CobT PF06213.12 ORF11050 - 0.22 10.9 36.4 0.042 13.2 3.4 3.4 3 0 0 3 3 3 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 ORF11050 - 0.89 8.8 43.8 0.41 9.9 15.0 3.3 3 0 0 3 3 3 0 NOA36 protein DUF2052 PF09747.9 ORF11050 - 1 9.4 45.9 0.16 12.1 10.0 3.6 3 1 0 3 3 3 0 Coiled-coil domain containing protein (DUF2052) SecA_SW PF07516.13 ORF99504 - 6.3e-69 232.0 5.3 6.3e-69 232.0 5.3 1.8 2 0 0 2 2 2 1 SecA Wing and Scaffold domain SecA_PP_bind PF01043.20 ORF99504 - 4.2e-39 133.6 0.3 1.1e-38 132.3 0.3 1.8 1 0 0 1 1 1 1 SecA preprotein cross-linking domain SecA_DEAD PF07517.14 ORF99504 - 1.3e-19 70.6 0.1 2.6e-19 69.6 0.1 1.6 1 0 0 1 1 1 1 SecA DEAD-like domain SEC-C PF02810.15 ORF99504 - 5.3e-11 42.2 9.7 8.5e-11 41.6 9.7 1.3 1 0 0 1 1 1 1 SEC-C motif DUF2175 PF09943.9 ORF99504 - 0.038 14.3 0.2 0.16 12.3 0.2 2.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) DUF2764 PF10962.8 ORF99504 - 0.088 12.3 1.2 0.16 11.5 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2764) Helicase_C PF00271.31 ORF99504 - 0.61 10.5 2.7 0.91 9.9 0.1 2.4 2 0 0 2 2 2 0 Helicase conserved C-terminal domain Myb_Cef PF11831.8 ORF38811 - 2.9e-40 138.3 1.8 2.9e-40 138.3 1.8 4.6 5 1 1 6 6 6 1 pre-mRNA splicing factor component AsnC_trans_reg2 PF17805.1 ORF38811 - 0.097 12.8 0.4 0.39 10.9 0.4 2.1 1 0 0 1 1 1 0 AsnC-like ligand binding domain START PF01852.19 ORF152750 - 2.2e-15 56.6 0.0 7.9e-15 54.8 0.0 1.8 2 0 0 2 2 2 1 START domain HSP70 PF00012.20 ORF147731 - 4.9e-244 811.0 14.9 5.6e-244 810.8 14.9 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF147731 - 2.3e-19 69.4 0.6 2.9e-18 65.8 0.4 2.1 2 0 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 ORF147731 - 2.7e-05 24.5 2.7 0.44 11.0 0.1 3.7 3 2 0 3 3 3 2 Cell division protein FtsA FGGY_C PF02782.16 ORF147731 - 0.0027 17.5 0.0 0.01 15.6 0.0 1.9 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF147731 - 0.0036 16.3 0.1 0.27 10.2 0.1 2.3 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain PilM_2 PF11104.8 ORF147731 - 0.0053 15.8 0.5 3.1 6.7 0.0 2.8 3 1 0 3 3 3 2 Type IV pilus assembly protein PilM; Hydantoinase_A PF01968.18 ORF147731 - 0.095 11.9 1.7 0.53 9.5 0.2 2.6 3 1 0 3 3 3 0 Hydantoinase/oxoprolinase StbA PF06406.11 ORF147731 - 1 8.6 10.0 0.11 11.7 0.2 3.2 3 1 1 4 4 4 0 StbA protein Effector_1 PF04518.12 ORF147731 - 1.6 7.7 5.3 0.7 8.9 0.3 2.2 2 0 0 2 2 2 0 Effector from type III secretion system Peptidase_M49 PF03571.15 ORF114574 - 6.1e-200 665.3 6.4 7.1e-200 665.0 6.4 1.0 1 0 0 1 1 1 1 Peptidase family M49 Pro-kuma_activ PF09286.11 ORF114574 - 0.092 13.0 0.1 0.21 11.9 0.1 1.5 1 0 0 1 1 1 0 Pro-kumamolisin, activation domain Pkinase PF00069.25 ORF70473 - 4.5e-62 209.8 0.1 9.2e-62 208.8 0.1 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70473 - 7.6e-39 133.5 0.0 1.3e-38 132.8 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF70473 - 2.5e-09 37.6 0.2 7e-09 36.1 0.2 1.9 1 0 0 1 1 1 1 PH domain Pkinase_fungal PF17667.1 ORF70473 - 4.6e-05 22.4 0.5 0.00011 21.1 0.0 1.8 3 0 0 3 3 3 1 Fungal protein kinase EF-hand_1 PF00036.32 ORF70473 - 6.2e-05 22.3 8.3 0.00015 21.0 1.3 3.6 3 0 0 3 3 3 1 EF hand Kinase-like PF14531.6 ORF70473 - 0.00015 21.2 0.0 0.00031 20.2 0.0 1.5 1 0 0 1 1 1 1 Kinase-like EF-hand_6 PF13405.6 ORF70473 - 0.00022 20.9 5.6 0.0027 17.5 1.2 4.0 3 0 0 3 3 3 1 EF-hand domain RIO1 PF01163.22 ORF70473 - 0.00071 19.2 0.4 0.0014 18.2 0.4 1.5 1 0 0 1 1 1 1 RIO1 family YrbL-PhoP_reg PF10707.9 ORF70473 - 0.00074 19.1 0.1 0.0017 18.0 0.1 1.5 1 0 0 1 1 1 1 PhoP regulatory network protein YrbL EF-hand_7 PF13499.6 ORF70473 - 0.00087 19.7 1.8 0.00087 19.7 1.8 3.9 3 2 1 4 4 4 1 EF-hand domain pair DUF4502 PF14950.6 ORF70473 - 0.016 14.6 1.4 0.029 13.8 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4502) EF-hand_8 PF13833.6 ORF70473 - 0.02 14.7 2.8 0.093 12.6 2.3 2.5 1 1 1 2 2 2 0 EF-hand domain pair Kdo PF06293.14 ORF70473 - 0.021 14.2 0.0 0.041 13.2 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_5 PF13202.6 ORF70473 - 0.044 13.3 1.6 0.2 11.2 0.5 2.6 2 0 0 2 2 2 0 EF hand PHD PF00628.29 ORF151009 - 3.3e-07 30.1 11.4 1.7e-06 27.8 7.4 2.9 2 0 0 2 2 2 1 PHD-finger DZR PF12773.7 ORF151009 - 0.081 13.0 6.8 4.2 7.5 6.8 3.3 1 1 0 1 1 1 0 Double zinc ribbon C1_1 PF00130.22 ORF151009 - 0.58 10.1 9.3 0.13 12.2 4.5 2.5 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-CW PF07496.15 ORF151009 - 1.4 9.0 7.4 2.2 8.4 2.6 3.2 2 0 0 2 2 2 0 CW-type Zinc Finger ACOX PF01756.19 ORF65012 - 1.2e-39 135.8 0.1 3.3e-39 134.3 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA oxidase Acyl-CoA_dh_M PF02770.19 ORF65012 - 1e-10 41.6 0.0 1.8e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_ox_N PF14749.6 ORF65012 - 2.7e-09 37.7 0.0 9e-09 35.9 0.0 2.0 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal ABC_tran PF00005.27 ORF6065 - 2.2e-30 106.0 0.1 5.2e-30 104.7 0.1 1.7 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF6065 - 2.1e-23 83.3 19.2 3.2e-23 82.8 19.2 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF6065 - 1.5e-05 24.5 8.2 0.001 18.6 0.3 2.6 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF6065 - 0.00026 20.9 6.7 0.0037 17.1 0.9 3.2 3 1 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF6065 - 0.002 17.8 0.0 0.0058 16.3 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF6065 - 0.014 15.5 0.1 0.039 14.0 0.1 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.6 ORF6065 - 0.05 14.0 0.1 0.15 12.5 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain ATP-synt_ab PF00006.25 ORF6065 - 0.067 12.8 0.0 0.12 12.0 0.0 1.5 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_30 PF13604.6 ORF6065 - 0.19 11.4 0.1 0.78 9.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF6065 - 1.2 9.6 7.1 0.23 11.9 0.9 2.4 2 0 0 2 2 2 0 AAA domain DUF2585 PF10755.9 ORF6065 - 1.9 8.2 11.0 4.3 7.0 3.2 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2585) Sec16_C PF12931.7 ORF56798 - 2.2e-05 24.2 1.5 0.00013 21.8 1.4 2.1 1 1 0 1 1 1 1 Sec23-binding domain of Sec16 Med15_fungi PF05397.12 ORF56798 - 0.011 16.0 0.8 0.026 14.8 0.8 1.6 1 0 0 1 1 1 0 Mediator complex subunit 15 WASH_WAHD PF11945.8 ORF52816 - 1.3e-11 44.6 15.3 1.3e-11 44.6 15.3 2.6 1 1 0 2 2 2 1 WAHD domain of WASH complex PI3_PI4_kinase PF00454.27 ORF39768 - 1.2e-38 133.3 0.2 1.2e-38 133.3 0.2 2.2 2 1 0 2 2 2 1 Phosphatidylinositol 3- and 4-kinase Avl9 PF09794.9 ORF27155 - 6.2e-66 222.6 9.9 5.3e-64 216.3 9.9 2.4 1 1 0 1 1 1 1 Transport protein Avl9 SPA PF08616.10 ORF27155 - 2.1e-10 40.5 2.1 2.7e-09 37.0 2.1 2.6 1 1 0 1 1 1 1 Stabilization of polarity axis DUF2347 PF09804.9 ORF27155 - 2.8e-09 37.0 8.7 2.8e-09 37.0 8.7 4.0 2 1 1 3 3 3 1 Uncharacterized conserved protein (DUF2347) DENN PF02141.21 ORF27155 - 0.00011 22.3 4.1 0.00017 21.6 1.0 2.8 2 1 1 3 3 3 1 DENN (AEX-3) domain Afi1 PF07792.12 ORF27155 - 0.0034 17.9 0.4 0.0034 17.9 0.4 3.4 3 0 0 3 3 3 1 Docking domain of Afi1 for Arf3 in vesicle trafficking DUF5595 PF18077.1 ORF27155 - 0.073 13.2 4.5 0.78 9.9 1.0 3.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5595) Viral_Beta_CD PF04530.12 ORF27155 - 0.91 9.8 3.8 1.5 9.1 0.2 2.8 2 1 0 2 2 2 0 Viral Beta C/D like family PCB_OB PF17092.5 ORF129459 - 0.013 16.2 1.4 0.013 16.2 1.4 3.5 4 0 0 4 4 4 0 Penicillin-binding protein OB-like domain TTL PF03133.15 ORF108208 - 2.7e-89 299.2 0.3 2.7e-89 299.2 0.3 1.6 2 0 0 2 2 2 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF108208 - 6.3e-09 35.4 0.1 2.8e-05 23.5 0.0 2.9 2 1 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF108208 - 6e-07 29.0 0.1 0.0023 17.2 0.0 2.6 3 0 0 3 3 3 2 Sugar-transfer associated ATP-grasp S_locus_glycop PF00954.20 ORF108208 - 0.29 11.7 5.1 4.1 8.0 0.0 3.3 3 0 0 3 3 3 0 S-locus glycoprotein domain Kinesin PF00225.23 ORF13358 - 1.3e-70 237.9 4.6 1.3e-70 237.9 4.6 3.2 2 1 0 3 3 3 1 Kinesin motor domain DUF1921 PF09081.10 ORF97230 - 0.0028 17.8 0.9 0.0091 16.2 0.9 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1921) Transketolase_N PF00456.21 ORF97013 - 5.7e-175 581.1 0.2 8.8e-175 580.5 0.2 1.3 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Transket_pyr PF02779.24 ORF97013 - 1.4e-44 151.9 0.6 3.6e-44 150.6 0.0 2.0 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF97013 - 3e-20 72.3 0.1 7.6e-20 71.1 0.1 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain DXP_synthase_N PF13292.6 ORF97013 - 5.7e-08 32.3 0.0 0.00018 20.9 0.0 2.3 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 ORF97013 - 0.00073 18.6 0.0 0.0015 17.6 0.0 1.5 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 ORF97013 - 0.037 13.8 6.4 0.11 12.3 1.4 3.2 2 1 0 2 2 2 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FAD_binding_6 PF00970.24 ORF82612 - 4.7e-06 26.9 0.0 1.5e-05 25.2 0.0 1.9 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF82612 - 0.00053 20.6 0.0 0.0047 17.6 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF82612 - 0.0023 18.1 0.0 0.0096 16.1 0.0 2.1 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase WD40 PF00400.32 ORF81022 - 5.7e-11 42.8 3.3 0.0016 19.2 0.0 5.7 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF81022 - 1.7e-06 28.2 0.0 2.4 8.5 0.0 4.6 4 2 1 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF81022 - 0.0026 16.8 0.0 0.042 12.8 0.0 2.1 2 0 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein SLY PF12485.8 ORF81022 - 1.1 10.0 9.8 0.06 14.1 1.9 2.3 2 0 0 2 2 2 0 Lymphocyte signaling adaptor protein MAP17 PF15807.5 ORF71970 - 0.00016 21.9 0.1 0.00039 20.6 0.0 1.6 2 0 0 2 2 2 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 LRR19-TM PF15176.6 ORF71970 - 0.00092 19.2 0.0 0.0026 17.7 0.0 1.8 1 0 0 1 1 1 1 Leucine-rich repeat family 19 TM domain DUF4834 PF16118.5 ORF71970 - 0.026 15.5 0.1 0.17 12.8 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) EVC2_like PF12297.8 ORF71970 - 0.06 12.0 0.1 0.25 10.0 0.0 1.9 2 0 0 2 2 2 0 Ellis van Creveld protein 2 like protein Kelch_2 PF07646.15 ORF71970 - 0.079 13.0 0.0 0.2 11.7 0.0 1.7 1 0 0 1 1 1 0 Kelch motif fn3_3 PF14686.6 ORF71970 - 0.47 10.3 6.7 0.22 11.3 0.3 3.0 2 0 0 2 2 2 0 Polysaccharide lyase family 4, domain II WD40 PF00400.32 ORF61138 - 5.7e-11 42.8 3.3 0.0016 19.2 0.0 5.7 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF61138 - 1.7e-06 28.2 0.0 2.4 8.5 0.0 4.6 4 2 1 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF61138 - 0.0026 16.8 0.0 0.042 12.8 0.0 2.1 2 0 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein SLY PF12485.8 ORF61138 - 1.1 10.0 9.8 0.06 14.1 1.9 2.3 2 0 0 2 2 2 0 Lymphocyte signaling adaptor protein TMF_DNA_bd PF12329.8 ORF60461 - 0.0013 18.7 8.2 0.0013 18.7 8.2 7.4 1 1 4 7 7 7 1 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF60461 - 0.0051 15.7 78.9 0.0086 15.0 20.4 4.6 1 1 3 4 4 4 2 Spc7 kinetochore protein CC2-LZ PF16516.5 ORF60461 - 0.012 15.9 2.6 0.012 15.9 2.6 7.2 1 1 6 8 8 7 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF1664 PF07889.12 ORF60461 - 0.064 13.3 51.0 0.97 9.5 5.7 5.8 1 1 6 7 7 7 0 Protein of unknown function (DUF1664) Mcp5_PH PF12814.7 ORF60461 - 0.17 12.0 2.4 0.27 11.4 0.6 2.3 2 0 0 2 2 2 0 Meiotic cell cortex C-terminal pleckstrin homology TPR_MLP1_2 PF07926.12 ORF60461 - 0.34 11.0 69.1 0.084 12.9 11.6 5.0 4 1 1 5 5 5 0 TPR/MLP1/MLP2-like protein MAD PF05557.13 ORF60461 - 0.75 8.1 78.3 0.5 8.7 25.6 3.3 1 1 2 3 3 3 0 Mitotic checkpoint protein Fib_alpha PF08702.10 ORF60461 - 1 9.5 68.9 0.39 10.9 9.3 4.9 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family Tropomyosin PF00261.20 ORF60461 - 1.7 8.0 73.3 0.13 11.6 13.8 4.0 1 1 3 4 4 4 0 Tropomyosin HAP1_N PF04849.13 ORF60461 - 3.7 6.7 70.0 4.4 6.4 28.0 4.1 1 1 3 4 4 4 0 HAP1 N-terminal conserved region DUF745 PF05335.13 ORF60461 - 8.6 6.0 47.6 1.7 8.3 1.5 4.6 3 2 2 5 5 5 0 Protein of unknown function (DUF745) Enolase_C PF00113.22 ORF114400 - 1.7e-148 493.7 0.0 2.5e-148 493.1 0.0 1.2 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 ORF114400 - 1.5e-54 183.6 0.0 3.8e-54 182.4 0.0 1.7 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 ORF114400 - 2.9e-09 36.8 0.0 5.2e-09 36.0 0.0 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like His_Phos_1 PF00300.22 ORF114400 - 5.1e-06 26.3 0.0 5.1e-05 23.1 0.0 2.2 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) MAAL_C PF07476.11 ORF114400 - 0.00011 21.4 0.0 0.0002 20.6 0.0 1.3 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus DUF2631 PF10939.8 ORF114400 - 0.094 12.6 0.0 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) SieB PF14163.6 ORF82547 - 0.12 11.9 0.5 0.21 11.1 0.5 1.3 1 0 0 1 1 1 0 Super-infection exclusion protein B Cyclin_N PF00134.23 ORF78590 - 2.8e-18 65.9 0.2 7.8e-18 64.4 0.0 1.9 2 0 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF78590 - 9.2e-13 48.3 0.5 9.2e-13 48.3 0.5 3.6 4 0 0 4 4 4 1 Cyclin, C-terminal domain Yip1 PF04893.17 ORF111833 - 0.018 14.8 0.4 0.018 14.8 0.4 1.8 2 0 0 2 2 2 0 Yip1 domain HhH-GPD PF00730.25 ORF111833 - 0.081 13.4 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein DUF1488 PF07369.11 ORF111833 - 0.15 12.1 0.0 0.54 10.3 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1488) YqaH PF17448.2 ORF103811 - 0.036 14.4 0.1 0.14 12.5 0.1 2.0 2 0 0 2 2 2 0 Uncharacterized YqaH-like Glyco_hydro_31 PF01055.26 ORF86555 - 2.2e-111 373.2 10.7 2.9e-111 372.8 10.7 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Kdo_hydroxy PF11004.8 ORF86555 - 0.0033 16.7 0.1 0.48 9.7 0.0 3.1 3 0 0 3 3 3 2 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase Glyco_hydro_31 PF01055.26 ORF63102 - 2.2e-111 373.2 10.7 2.9e-111 372.8 10.7 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Kdo_hydroxy PF11004.8 ORF63102 - 0.0033 16.7 0.1 0.48 9.7 0.0 3.1 3 0 0 3 3 3 2 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase ABC_tran PF00005.27 ORF55036 - 8.4e-13 49.0 0.0 3.5e-12 47.0 0.0 2.1 1 1 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 ORF55036 - 0.0057 17.0 0.0 0.012 15.9 0.0 1.7 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF55036 - 0.074 13.3 0.1 0.21 11.8 0.1 1.7 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF55036 - 0.12 12.1 0.1 0.21 11.3 0.1 1.3 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF55036 - 0.2 11.4 0.3 6 6.6 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein Glyco_hydro_31 PF01055.26 ORF134594 - 2.2e-111 373.2 10.7 2.9e-111 372.8 10.7 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Kdo_hydroxy PF11004.8 ORF134594 - 0.0033 16.7 0.1 0.48 9.7 0.0 3.1 3 0 0 3 3 3 2 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase Glyco_hydro_31 PF01055.26 ORF128074 - 2.2e-111 373.2 10.7 2.9e-111 372.8 10.7 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Kdo_hydroxy PF11004.8 ORF128074 - 0.0033 16.7 0.1 0.48 9.7 0.0 3.1 3 0 0 3 3 3 2 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase Glyco_hydro_31 PF01055.26 ORF11146 - 2.2e-111 373.2 10.7 2.9e-111 372.8 10.7 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Kdo_hydroxy PF11004.8 ORF11146 - 0.0033 16.7 0.1 0.48 9.7 0.0 3.1 3 0 0 3 3 3 2 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase FH2 PF02181.23 ORF87252 - 1.7e-26 93.3 8.3 1.7e-26 93.3 8.3 2.4 2 2 0 2 2 2 1 Formin Homology 2 Domain Peptidase_C2 PF00648.21 ORF87252 - 0.07 12.1 0.3 0.17 10.9 0.0 1.7 2 0 0 2 2 2 0 Calpain family cysteine protease DUF2572 PF10833.8 ORF87252 - 0.15 11.8 0.1 0.15 11.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2572) Cas_Csy4 PF09618.10 ORF87252 - 4 7.5 6.6 0.35 11.0 0.2 2.3 3 0 0 3 3 3 0 CRISPR-associated protein (Cas_Csy4) PASTA PF03793.19 ORF34633 - 0.062 13.2 0.7 0.27 11.1 0.2 2.4 2 0 0 2 2 2 0 PASTA domain Pyr_redox_2 PF07992.14 ORF25447 - 1.5e-49 168.8 1.3 2.2e-49 168.3 1.3 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DEP PF00610.21 ORF25447 - 2.5e-23 81.9 0.9 6.1e-23 80.7 0.7 1.8 2 0 0 2 2 2 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) Pyr_redox_dim PF02852.22 ORF25447 - 6.8e-21 74.6 0.0 1.7e-20 73.3 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF25447 - 2.7e-13 50.3 1.9 5.8e-13 49.2 0.0 2.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF25447 - 6e-06 25.7 3.3 0.00015 21.1 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF25447 - 0.0016 17.8 1.2 0.029 13.6 0.0 2.3 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 ORF25447 - 0.0062 15.7 5.0 2.4 7.1 0.0 2.5 2 1 0 2 2 2 2 Glucose inhibited division protein A ThiF PF00899.21 ORF25447 - 0.027 13.8 0.0 0.066 12.6 0.0 1.6 1 0 0 1 1 1 0 ThiF family 3HCDH_N PF02737.18 ORF25447 - 0.028 14.3 0.0 0.06 13.2 0.0 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 ORF25447 - 0.083 12.5 0.0 0.21 11.2 0.0 1.7 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_oxidored PF12831.7 ORF25447 - 0.096 12.0 7.4 1.3 8.2 0.7 3.4 3 1 1 4 4 4 0 FAD dependent oxidoreductase 2-Hacid_dh_C PF02826.19 ORF25447 - 0.15 11.4 0.0 0.3 10.4 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_2 PF00890.24 ORF25447 - 0.15 11.1 7.1 3 6.8 5.7 2.5 3 0 0 3 3 3 0 FAD binding domain DUF4869 PF16163.5 ORF25447 - 0.44 10.2 1.8 23 4.7 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4869) Lycopene_cycl PF05834.12 ORF25447 - 0.55 9.2 0.0 0.55 9.2 0.0 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein HI0933_like PF03486.14 ORF25447 - 0.6 8.8 8.7 0.7 8.5 2.5 3.5 4 0 0 4 4 4 0 HI0933-like protein UDPG_MGDP_dh_N PF03721.14 ORF25447 - 0.71 9.4 2.9 1.2 8.7 0.0 2.4 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XPG_I PF00867.18 ORF144823 - 1.8e-22 79.5 0.0 1.6e-17 63.6 0.0 3.1 3 0 0 3 3 3 2 XPG I-region XPG_N PF00752.17 ORF144823 - 0.00033 21.1 0.0 0.001 19.5 0.0 1.8 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I_2 PF12813.7 ORF144823 - 0.0083 15.6 0.0 0.031 13.8 0.0 1.9 1 0 0 1 1 1 1 XPG domain containing DUF3323 PF11796.8 ORF144823 - 0.017 15.0 4.4 0.038 13.9 4.4 1.5 1 0 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) DUF4618 PF15397.6 ORF144823 - 0.051 13.0 0.7 0.081 12.3 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) TRP PF06011.12 ORF107000 - 8.6e-05 21.4 5.8 8.6e-05 21.4 5.8 2.9 3 0 0 3 3 3 1 Transient receptor potential (TRP) ion channel V_ATPase_I PF01496.19 ORF107000 - 0.00011 20.4 0.2 0.00011 20.4 0.2 2.0 2 0 0 2 2 2 1 V-type ATPase 116kDa subunit family Paf1 PF03985.13 ORF107000 - 0.0016 17.6 4.1 0.0023 17.0 4.1 1.1 1 0 0 1 1 1 1 Paf1 Glypican PF01153.19 ORF107000 - 1.2 7.9 3.4 1.6 7.4 3.4 1.1 1 0 0 1 1 1 0 Glypican DUF3687 PF12459.8 ORF107000 - 2.6 7.6 9.8 0.54 9.8 0.6 3.2 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein SpoIIIAH PF12685.7 ORF107000 - 9.9 5.9 9.5 2.3 8.0 1.7 2.3 2 0 0 2 2 2 0 SpoIIIAH-like protein Lon_C PF05362.13 ORF46938 - 5.3e-98 326.6 0.1 8.8e-98 325.9 0.1 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain LON_substr_bdg PF02190.16 ORF46938 - 4.6e-19 69.1 0.1 8.9e-19 68.2 0.1 1.5 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 ORF46938 - 5.7e-18 65.6 0.0 1.2e-17 64.5 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF46938 - 4.4e-10 39.7 0.0 1.9e-09 37.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) ChlI PF13541.6 ORF46938 - 2.5e-07 30.6 0.0 5.5e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_PrkA PF08298.11 ORF46938 - 8.2e-06 25.0 0.0 1.3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 PrkA AAA domain AAA_16 PF13191.6 ORF46938 - 0.00011 22.6 0.0 0.00036 20.9 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain IstB_IS21 PF01695.17 ORF46938 - 0.00048 19.9 0.0 0.0012 18.6 0.0 1.7 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_3 PF07726.11 ORF46938 - 0.0012 18.7 0.0 0.0035 17.2 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 ORF46938 - 0.0024 18.4 0.1 0.011 16.2 0.0 2.3 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 ORF46938 - 0.0033 17.2 0.0 0.02 14.6 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF46938 - 0.0068 16.7 0.2 0.084 13.1 0.2 2.5 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 ORF46938 - 0.011 15.7 0.1 0.3 11.0 0.0 2.5 2 0 0 2 2 2 0 NACHT domain AAA_2 PF07724.14 ORF46938 - 0.012 15.8 0.2 0.037 14.1 0.0 1.9 2 1 0 2 2 2 0 AAA domain (Cdc48 subfamily) AAA_14 PF13173.6 ORF46938 - 0.013 15.6 0.0 0.04 13.9 0.0 1.9 1 0 0 1 1 1 0 AAA domain ClpB_D2-small PF10431.9 ORF46938 - 0.04 14.0 0.8 0.14 12.2 0.8 2.0 1 0 0 1 1 1 0 C-terminal, D2-small domain, of ClpB protein AAA_33 PF13671.6 ORF46938 - 0.04 14.1 0.5 0.1 12.7 0.1 1.9 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 ORF46938 - 0.052 13.5 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 ORF46938 - 0.11 12.5 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 ORF46938 - 0.12 12.8 0.0 0.43 11.0 0.0 2.0 2 0 0 2 2 2 0 RNA helicase Rad17 PF03215.15 ORF46938 - 0.13 12.2 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain YqaH PF17448.2 ORF151940 - 0.036 14.4 0.1 0.14 12.5 0.1 2.0 2 0 0 2 2 2 0 Uncharacterized YqaH-like PDEase_I PF00233.19 ORF145865 - 7.6e-79 264.8 0.1 7.6e-79 264.8 0.1 2.0 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase SMI1_KNR4 PF09346.10 ORF145865 - 0.043 14.2 0.2 0.17 12.3 0.2 2.0 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) Ion_trans PF00520.31 ORF124384 - 5.6e-29 101.1 29.0 7.5e-20 71.2 12.5 2.1 2 0 0 2 2 2 2 Ion transport protein Ribosomal_L1 PF00687.21 ORF124384 - 0.15 11.7 0.2 0.25 11.0 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L1p/L10e family DUF1003 PF06210.11 ORF124384 - 9.1 6.4 6.4 1.8 8.7 0.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1003) GlgX_C PF18390.1 ORF63922 - 1.8e-43 146.3 0.2 3.6e-43 145.3 0.2 1.6 1 0 0 1 1 1 1 Glycogen debranching enzyme C-terminal domain CBM_48 PF02922.18 ORF63922 - 6.2e-21 74.5 0.0 1.8e-20 73.1 0.0 1.8 2 0 0 2 2 2 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 ORF63922 - 1.3e-15 57.8 0.0 2.7e-09 37.1 0.0 3.2 2 1 0 2 2 2 2 Alpha amylase, catalytic domain Glyco_hydro_70 PF02324.16 ORF63922 - 0.26 9.4 0.0 0.39 8.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 70 FtsJ PF01728.19 ORF16703 - 8.3e-07 29.3 0.3 1.4e-05 25.3 0.3 2.5 1 1 0 1 1 1 1 FtsJ-like methyltransferase DivIC PF04977.15 ORF86026 - 0.023 14.5 3.1 6.3 6.6 0.3 3.8 2 1 1 3 3 3 0 Septum formation initiator DUF2730 PF10805.8 ORF86026 - 0.42 10.7 2.2 11 6.2 0.9 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) HALZ PF02183.18 ORF86026 - 0.44 10.8 6.3 1.4 9.2 0.2 2.9 3 0 0 3 3 3 0 Homeobox associated leucine zipper Med9 PF07544.13 ORF86026 - 0.62 10.2 5.1 23 5.2 1.1 3.8 3 0 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 SlyX PF04102.12 ORF86026 - 1.2 9.8 3.7 2 9.1 0.5 3.0 3 1 0 3 3 3 0 SlyX Bap31_Bap29_C PF18035.1 ORF86026 - 1.2 9.2 8.9 1.3 9.0 0.1 3.5 3 0 0 3 3 3 0 Bap31/Bap29 cytoplasmic coiled-coil domain JIP_LZII PF16471.5 ORF86026 - 7.8 6.7 11.3 7.9 6.7 1.0 3.9 3 1 1 4 4 4 0 JNK-interacting protein leucine zipper II Methyltransf_25 PF13649.6 ORF53882 - 2e-05 25.2 0.5 8.8e-05 23.1 0.5 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF53882 - 0.00019 21.3 0.9 0.00049 19.9 0.2 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF53882 - 0.00028 21.5 0.4 0.00095 19.8 0.4 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF53882 - 0.0054 17.4 1.1 0.034 14.9 0.4 2.5 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF53882 - 0.011 15.6 0.2 0.024 14.5 0.1 1.7 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_32 PF13679.6 ORF53882 - 0.017 15.1 0.2 0.032 14.2 0.2 1.5 1 1 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 ORF53882 - 0.038 13.5 0.1 0.19 11.3 0.1 2.1 2 0 0 2 2 2 0 Methyltransferase small domain PrmA PF06325.13 ORF53882 - 0.17 11.2 0.1 0.45 9.9 0.0 1.7 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) WD40 PF00400.32 ORF97608 - 2.1e-07 31.5 0.4 0.031 15.2 0.0 4.0 4 0 0 4 4 4 2 WD domain, G-beta repeat WD40 PF00400.32 ORF93970 - 2.1e-07 31.5 0.4 0.031 15.2 0.0 4.0 4 0 0 4 4 4 2 WD domain, G-beta repeat EF-hand_1 PF00036.32 ORF85873 - 0.00035 19.9 0.0 0.0011 18.4 0.0 1.8 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF85873 - 0.0021 17.8 0.0 0.0076 16.1 0.0 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF85873 - 0.0021 18.4 0.0 0.0077 16.7 0.0 2.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF85873 - 0.0036 16.7 0.0 0.014 14.8 0.0 2.1 1 0 0 1 1 1 1 EF hand FliJ PF02050.16 ORF85873 - 0.054 13.7 0.1 0.054 13.7 0.1 6.0 3 1 3 6 6 6 0 Flagellar FliJ protein Hyccin PF09790.9 ORF85873 - 0.093 11.8 0.5 0.17 10.9 0.5 1.3 1 0 0 1 1 1 0 Hyccin Inj_translocase PF16928.5 ORF85873 - 0.26 10.7 16.6 0.59 9.6 16.6 1.5 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome EF-hand_1 PF00036.32 ORF69602 - 0.00035 19.9 0.0 0.0011 18.4 0.0 1.8 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF69602 - 0.0021 17.8 0.0 0.0076 16.1 0.0 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF69602 - 0.0021 18.4 0.0 0.0077 16.7 0.0 2.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF69602 - 0.0036 16.7 0.0 0.014 14.8 0.0 2.1 1 0 0 1 1 1 1 EF hand FliJ PF02050.16 ORF69602 - 0.054 13.7 0.1 0.054 13.7 0.1 6.0 3 1 3 6 6 6 0 Flagellar FliJ protein Hyccin PF09790.9 ORF69602 - 0.093 11.8 0.5 0.17 10.9 0.5 1.3 1 0 0 1 1 1 0 Hyccin Inj_translocase PF16928.5 ORF69602 - 0.26 10.7 16.6 0.59 9.6 16.6 1.5 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome Peptidase_S10 PF00450.22 ORF60178 - 1.2e-84 285.2 1.4 1.7e-84 284.6 1.4 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF60178 - 4e-05 23.9 5.7 4e-05 23.9 5.7 2.5 2 0 0 2 2 2 1 EGF-like domain EGF_Tenascin PF18720.1 ORF60178 - 0.0027 17.7 1.8 0.0076 16.3 1.8 1.8 1 0 0 1 1 1 1 Tenascin EGF domain YMF19 PF02326.15 ORF60178 - 0.053 14.3 1.2 0.19 12.5 1.2 1.9 1 0 0 1 1 1 0 Plant ATP synthase F0 zf-BED PF02892.15 ORF128756 - 0.012 15.7 3.0 0.4 10.7 0.0 3.7 3 0 0 3 3 3 0 BED zinc finger zinc_ribbon_6 PF14599.6 ORF128756 - 3.1 7.9 9.8 2.4 8.2 0.1 3.7 4 0 0 4 4 4 0 Zinc-ribbon HypA PF01155.19 ORF128756 - 3.1 7.8 8.2 2.5 8.1 0.1 3.3 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AMP-binding PF00501.28 ORF92522 - 5.9e-86 288.7 0.0 8.4e-86 288.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme DnaJ PF00226.31 ORF92017 - 1.9e-11 43.9 0.1 4.3e-11 42.8 0.1 1.7 1 0 0 1 1 1 1 DnaJ domain AMP-binding PF00501.28 ORF89945 - 5.9e-86 288.7 0.0 8.4e-86 288.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme MIP PF00230.20 ORF25140 - 1.6e-76 257.0 12.7 2.1e-76 256.6 12.7 1.1 1 0 0 1 1 1 1 Major intrinsic protein WD40 PF00400.32 ORF98303 - 2.6e-21 75.5 9.2 9.2e-05 23.1 0.3 5.9 6 0 0 6 6 6 5 WD domain, G-beta repeat Striatin PF08232.12 ORF98303 - 1.1e-16 61.8 3.4 1.1e-16 61.8 3.4 2.4 2 0 0 2 2 2 1 Striatin family UTP15_C PF09384.10 ORF98303 - 0.011 15.4 0.8 0.046 13.4 0.2 2.3 2 1 0 2 2 2 0 UTP15 C terminal ANAPC4_WD40 PF12894.7 ORF98303 - 0.016 15.5 0.5 23 5.3 0.0 4.4 2 1 3 5 5 5 0 Anaphase-promoting complex subunit 4 WD40 domain Jnk-SapK_ap_N PF09744.9 ORF98303 - 0.18 12.0 18.1 0.032 14.5 2.4 2.5 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 DUF4164 PF13747.6 ORF98303 - 3.6 7.9 7.2 2.1 8.7 1.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) PDH_E1_M PF17831.1 ORF9153 - 2.7e-106 354.3 0.1 4.5e-106 353.6 0.1 1.4 1 0 0 1 1 1 1 Pyruvate dehydrogenase E1 component middle domain Transketolase_N PF00456.21 ORF9153 - 7.4e-08 31.7 0.1 0.00036 19.6 0.1 2.3 2 0 0 2 2 2 2 Transketolase, thiamine diphosphate binding domain Transketolase_C PF02780.20 ORF9153 - 0.0077 16.1 0.1 0.12 12.3 0.0 2.7 3 0 0 3 3 3 1 Transketolase, C-terminal domain PFO_beta_C PF12367.8 ORF9153 - 0.045 13.9 0.1 0.15 12.2 0.1 1.9 1 0 0 1 1 1 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal GAS2 PF02187.17 ORF7531 - 2.1e-09 37.3 0.1 1e-08 35.1 0.0 2.2 2 0 0 2 2 1 1 Growth-Arrest-Specific Protein 2 Domain Spc7 PF08317.11 ORF7531 - 3.6e-06 26.1 76.5 1.4e-05 24.2 9.5 5.3 1 1 5 6 6 6 3 Spc7 kinetochore protein Fib_alpha PF08702.10 ORF7531 - 0.0019 18.4 7.3 0.0019 18.4 7.3 6.6 1 1 4 7 7 7 2 Fibrinogen alpha/beta chain family HMMR_N PF15905.5 ORF7531 - 0.0024 17.4 75.5 0.22 10.9 15.8 4.6 1 1 2 4 4 4 4 Hyaluronan mediated motility receptor N-terminal TMF_DNA_bd PF12329.8 ORF7531 - 0.0024 17.8 10.5 0.0024 17.8 10.5 10.0 4 3 7 11 11 9 3 TATA element modulatory factor 1 DNA binding TolA_bind_tri PF16331.5 ORF7531 - 0.0044 17.1 5.8 0.0044 17.1 5.8 8.6 4 2 3 8 8 8 1 TolA binding protein trimerisation MscS_porin PF12795.7 ORF7531 - 0.0048 16.5 2.3 0.0048 16.5 2.3 4.8 2 1 2 4 4 3 2 Mechanosensitive ion channel porin domain Filament PF00038.21 ORF7531 - 0.021 14.4 70.4 0.054 13.1 18.0 4.9 1 1 3 4 4 4 0 Intermediate filament protein APG6_N PF17675.1 ORF7531 - 0.023 15.2 6.5 0.023 15.2 6.5 6.2 2 2 1 4 4 3 0 Apg6 coiled-coil region BST2 PF16716.5 ORF7531 - 0.027 15.1 1.4 0.027 15.1 1.4 7.9 3 2 7 10 10 9 0 Bone marrow stromal antigen 2 UPF0242 PF06785.11 ORF7531 - 0.029 14.5 67.4 0.044 13.9 11.9 5.0 1 1 2 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus AAA_13 PF13166.6 ORF7531 - 0.044 12.4 74.5 0.23 10.1 17.7 4.0 1 1 3 4 4 4 0 AAA domain MbeD_MobD PF04899.12 ORF7531 - 0.09 12.9 0.1 0.09 12.9 0.1 5.2 5 1 0 6 6 6 0 MbeD/MobD like Lebercilin PF15619.6 ORF7531 - 0.092 12.4 75.2 0.032 13.9 21.1 4.6 2 2 0 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease ATG16 PF08614.11 ORF7531 - 0.13 12.5 77.1 0.1 12.8 20.4 6.3 1 1 3 6 6 6 0 Autophagy protein 16 (ATG16) Golgin_A5 PF09787.9 ORF7531 - 0.14 11.6 70.8 0.54 9.7 16.7 5.1 1 1 4 5 5 5 0 Golgin subfamily A member 5 DUF2935 PF11155.8 ORF7531 - 0.14 12.4 17.4 3.8 7.9 4.6 5.1 2 2 0 2 2 2 0 Domain of unknown function (DUF2935) DUF3450 PF11932.8 ORF7531 - 0.23 10.7 65.3 0.3 10.4 13.7 6.7 2 1 5 7 7 7 0 Protein of unknown function (DUF3450) FPP PF05911.11 ORF7531 - 1.2 7.3 71.5 0.12 10.6 14.7 4.3 1 1 2 3 3 3 0 Filament-like plant protein, long coiled-coil IFP_35_N PF07334.13 ORF7531 - 1.2 9.3 0.0 1.2 9.3 0.0 6.5 9 1 0 9 9 6 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus GAS PF13851.6 ORF7531 - 1.2 8.4 77.8 0.015 14.6 10.8 5.5 3 2 1 5 5 5 0 Growth-arrest specific micro-tubule binding ERM PF00769.19 ORF7531 - 1.8 8.3 66.8 1.9 8.3 9.2 4.5 1 1 3 4 4 4 0 Ezrin/radixin/moesin family ApoO PF09769.9 ORF7531 - 2.6 8.0 9.9 24 4.9 1.0 4.8 4 3 1 5 5 5 0 Apolipoprotein O DUF5320 PF17253.2 ORF7531 - 3.7 8.7 27.2 0.33 12.0 0.4 6.3 6 0 0 6 6 6 0 Family of unknown function (DUF5320) DUF4407 PF14362.6 ORF7531 - 5.2 6.3 61.8 0.22 10.8 9.6 4.3 1 1 2 3 3 2 0 Domain of unknown function (DUF4407) MAD PF05557.13 ORF7531 - 6 5.1 77.8 4.2 5.6 26.7 3.4 1 1 2 3 3 3 0 Mitotic checkpoint protein CEP209_CC5 PF16574.5 ORF7531 - 9.1 6.5 59.7 0.095 12.9 10.0 6.8 1 1 5 6 6 6 0 Coiled-coil region of centrosome protein CE290 Fez1 PF06818.15 ORF7531 - 9.9 6.6 68.3 2.8 8.3 13.6 4.8 1 1 3 4 4 3 0 Fez1 Anoctamin PF04547.12 ORF55580 - 2.8e-50 171.5 8.7 3.8e-50 171.0 8.7 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel ACOX PF01756.19 ORF113790 - 6.1e-12 45.5 0.1 1.6e-11 44.1 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA oxidase Acyl-CoA_dh_M PF02770.19 ORF113790 - 9e-12 45.0 0.0 1.6e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 ORF113790 - 0.0071 16.6 0.0 0.017 15.4 0.0 1.6 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Pkinase PF00069.25 ORF56201 - 0.00091 18.7 0.1 0.0028 17.1 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF56201 - 0.079 12.2 0.1 0.2 10.9 0.0 1.7 2 0 0 2 2 2 0 Protein tyrosine kinase DUF3496 PF12001.8 ORF56201 - 1.4 9.4 7.0 1.5 9.3 2.3 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3496) SNF2_N PF00176.23 ORF28598 - 5.7e-28 97.6 0.0 9.8e-28 96.9 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 ORF28598 - 5.2e-17 62.2 0.0 9.8e-17 61.3 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF28598 - 0.00095 18.4 0.0 0.0017 17.6 0.0 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase ResIII PF04851.15 ORF28598 - 0.15 12.1 0.0 0.6 10.1 0.0 2.0 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit He_PIG PF05345.12 ORF132977 - 0.0011 19.1 5.7 0.02 15.1 4.1 3.2 2 0 0 2 2 2 1 Putative Ig domain MalM PF07148.12 ORF132977 - 0.0042 16.9 0.9 0.093 12.5 0.0 2.8 3 0 0 3 3 3 1 Maltose operon periplasmic protein precursor (MalM) Glycophorin_A PF01102.18 ORF132977 - 0.0046 17.2 0.0 0.019 15.2 0.0 2.1 1 0 0 1 1 1 1 Glycophorin A Pkinase PF00069.25 ORF116734 - 3e-59 200.6 0.0 6.4e-59 199.5 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF116734 - 9.5e-28 97.2 0.0 1.9e-27 96.2 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase cNMP_binding PF00027.29 ORF116734 - 2.8e-19 69.0 0.1 1.1e-16 60.6 0.0 3.1 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain Kinase-like PF14531.6 ORF116734 - 4.4e-06 26.2 0.0 7.8e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF116734 - 0.02 13.9 0.0 0.02 13.9 0.0 2.8 3 0 0 3 3 3 0 Seadornavirus VP7 APH PF01636.23 ORF116734 - 0.18 11.7 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Peptidase_S10 PF00450.22 ORF97116 - 8.9e-78 262.5 0.0 1.3e-77 262.0 0.0 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF97116 - 4.7e-05 23.7 13.9 0.00011 22.5 13.9 1.7 1 0 0 1 1 1 1 EGF-like domain EGF_Tenascin PF18720.1 ORF97116 - 8.8e-05 22.4 3.9 0.00018 21.4 3.9 1.5 1 0 0 1 1 1 1 Tenascin EGF domain DUF4051 PF13260.6 ORF97116 - 0.08 12.7 1.2 0.17 11.7 1.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) Peptidase_S10 PF00450.22 ORF41722 - 8.8e-85 285.6 0.2 1.3e-84 285.1 0.2 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF41722 - 0.0011 19.3 19.2 0.0011 19.3 19.2 2.1 1 1 1 2 2 2 1 EGF-like domain EGF_Tenascin PF18720.1 ORF41722 - 0.0029 17.6 10.6 0.0029 17.6 10.6 2.0 2 0 0 2 2 2 1 Tenascin EGF domain Papilloma_E5A PF05776.12 ORF41722 - 0.016 15.6 0.8 0.036 14.4 0.8 1.5 1 0 0 1 1 1 0 Papillomavirus E5A protein I-EGF_1 PF18372.1 ORF41722 - 0.11 12.6 11.4 0.26 11.4 11.4 1.6 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 EB PF01683.18 ORF41722 - 0.3 11.4 14.0 0.66 10.3 14.0 1.5 1 0 0 1 1 1 0 EB module PPR_2 PF13041.6 ORF131 - 1.8e-26 92.1 0.0 1.8e-05 24.8 0.0 9.1 4 1 6 10 10 10 6 PPR repeat family PPR PF01535.20 ORF131 - 3.8e-18 64.4 2.9 0.13 12.6 0.0 9.8 10 0 0 10 10 10 3 PPR repeat PPR_3 PF13812.6 ORF131 - 1.1e-13 51.0 0.0 0.00041 20.4 0.0 5.4 4 1 3 7 7 7 4 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF131 - 8.6e-10 38.2 0.1 0.68 9.7 0.0 7.6 8 0 0 8 8 8 2 PPR repeat PPR_long PF17177.4 ORF131 - 0.00019 20.9 0.3 0.045 13.1 0.0 3.6 2 1 0 3 3 3 1 Pentacotripeptide-repeat region of PRORP Clathrin PF00637.20 ORF131 - 0.01 15.7 0.1 58 3.5 0.0 5.0 5 2 1 6 6 6 0 Region in Clathrin and VPS TPR_6 PF13174.6 ORF131 - 0.011 16.3 0.7 9.6 7.1 0.2 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat Asp_Glu_race_2 PF14669.6 ORF131 - 0.12 12.0 0.1 0.87 9.2 0.0 2.4 3 0 0 3 3 3 0 Putative aspartate racemase Vps16_C PF04840.12 ORF131 - 0.15 11.1 0.1 0.32 10.0 0.0 1.6 2 0 0 2 2 2 0 Vps16, C-terminal region TPR_7 PF13176.6 ORF131 - 0.2 11.7 2.4 9.9 6.5 0.1 4.4 6 0 0 6 6 6 0 Tetratricopeptide repeat Peptidase_M1 PF01433.20 ORF11211 - 4e-53 180.2 4.8 6.4e-53 179.5 3.7 1.9 1 1 0 1 1 1 1 Peptidase family M1 domain ERAP1_C PF11838.8 ORF11211 - 3.2e-22 79.5 0.0 4.6e-22 79.0 0.0 1.3 1 0 0 1 1 1 1 ERAP1-like C-terminal domain SprT-like PF10263.9 ORF11211 - 0.008 16.0 0.0 0.071 13.0 0.0 2.2 2 0 0 2 2 2 1 SprT-like family OSCP PF00213.18 ORF11211 - 0.054 13.6 0.4 0.3 11.2 0.1 2.4 2 1 1 3 3 3 0 ATP synthase delta (OSCP) subunit Myb_DNA-bind_5 PF13873.6 ORF11211 - 0.077 13.1 0.1 1.1 9.3 0.0 2.8 3 0 0 3 3 3 0 Myb/SANT-like DNA-binding domain MIR PF02815.19 ORF75908 - 6.1e-05 22.9 0.5 0.017 14.9 0.0 3.3 2 1 0 2 2 2 2 MIR domain Ins145_P3_rec PF08709.11 ORF75908 - 0.004 16.4 0.2 0.1 11.8 0.0 2.5 2 1 0 2 2 2 1 Inositol 1,4,5-trisphosphate/ryanodine receptor CENP-F_leu_zip PF10473.9 ORF55043 - 0.00022 21.2 10.8 0.00022 21.2 10.8 7.0 1 1 6 7 7 7 4 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Tropomyosin PF00261.20 ORF55043 - 0.00091 18.7 18.0 0.00091 18.7 18.0 5.8 1 1 3 5 5 5 3 Tropomyosin DUF2353 PF09789.9 ORF55043 - 0.0023 17.4 14.2 0.0023 17.4 14.2 4.5 1 1 3 4 4 4 2 Uncharacterized coiled-coil protein (DUF2353) ATG16 PF08614.11 ORF55043 - 0.011 16.0 19.7 0.011 16.0 19.7 6.4 1 1 5 6 6 6 0 Autophagy protein 16 (ATG16) ADIP PF11559.8 ORF55043 - 0.016 15.3 4.6 0.016 15.3 4.6 7.8 1 1 6 9 9 9 0 Afadin- and alpha -actinin-Binding Fez1 PF06818.15 ORF55043 - 0.017 15.6 96.5 0.46 10.9 14.6 6.1 1 1 4 5 5 5 0 Fez1 Fib_alpha PF08702.10 ORF55043 - 0.019 15.2 3.5 0.019 15.2 3.5 6.6 2 2 5 7 7 7 0 Fibrinogen alpha/beta chain family Bcr-Abl_Oligo PF09036.10 ORF55043 - 2.7 8.0 16.9 9.6 6.3 0.6 5.3 4 1 0 4 4 4 0 Bcr-Abl oncoprotein oligomerisation domain EF-hand_8 PF13833.6 ORF52560 - 1.3e-09 37.8 4.0 0.21 11.4 0.2 5.1 5 0 0 5 5 5 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF52560 - 4.2e-08 32.5 14.9 0.058 13.3 0.6 6.4 7 0 0 7 7 7 4 EF-hand domain EF-hand_1 PF00036.32 ORF52560 - 6.5e-08 31.6 16.7 0.0085 15.6 0.4 6.9 7 0 0 7 7 7 3 EF hand EF-hand_7 PF13499.6 ORF52560 - 7e-08 32.8 21.2 0.028 14.9 0.2 5.3 5 2 1 6 6 6 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF52560 - 0.00097 18.5 1.2 0.68 9.5 0.0 3.9 3 0 0 3 3 3 1 EF hand DUF2634 PF10934.8 ORF52560 - 0.062 13.4 4.9 0.28 11.3 4.9 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2634) Peptidase_M1 PF01433.20 ORF39993 - 1.8e-32 112.7 0.5 3.5e-32 111.8 0.5 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF39993 - 3.6e-21 76.2 1.0 5.7e-21 75.6 1.0 1.3 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF39993 - 1.8e-05 24.8 0.0 8.8e-05 22.6 0.0 2.2 2 1 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal TnpW PF14202.6 ORF39993 - 0.049 13.5 0.1 1.3 8.9 0.0 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW Peptidase_M1 PF01433.20 ORF29858 - 1.8e-32 112.7 0.5 3.5e-32 111.8 0.5 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF29858 - 3.6e-21 76.2 1.0 5.7e-21 75.6 1.0 1.3 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF29858 - 1.8e-05 24.8 0.0 8.8e-05 22.6 0.0 2.2 2 1 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal TnpW PF14202.6 ORF29858 - 0.049 13.5 0.1 1.3 8.9 0.0 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW DUF812 PF05667.11 ORF129758 - 4.7e-55 187.6 56.6 4.7e-55 187.6 56.6 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF812) Nup54 PF13874.6 ORF129758 - 0.092 12.8 19.8 0.092 12.9 3.2 3.5 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 FUSC-like PF12805.7 ORF129758 - 0.17 11.0 1.2 0.64 9.1 1.2 2.0 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Baculo_PEP_C PF04513.12 ORF129758 - 0.44 10.6 19.1 0.7 9.9 6.6 4.0 2 1 3 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus 2OG-FeII_Oxy_5 PF13759.6 ORF117832 - 0.095 13.1 0.0 0.48 10.9 0.0 2.2 2 0 0 2 2 2 0 Putative 2OG-Fe(II) oxygenase Peptidase_M1 PF01433.20 ORF60041 - 4.5e-41 140.8 0.1 9.4e-41 139.8 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M1 domain Leuk-A4-hydro_C PF09127.11 ORF60041 - 5.3e-27 94.2 0.0 4.1e-26 91.3 0.0 2.2 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1_N PF17900.1 ORF60041 - 1.4e-17 64.4 0.3 2.5e-17 63.7 0.3 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TBCC_N PF16752.5 ORF60041 - 0.072 13.5 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain Peptidase_M1 PF01433.20 ORF37507 - 4.5e-41 140.8 0.1 9.4e-41 139.8 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M1 domain Leuk-A4-hydro_C PF09127.11 ORF37507 - 5.3e-27 94.2 0.0 4.1e-26 91.3 0.0 2.2 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1_N PF17900.1 ORF37507 - 1.4e-17 64.4 0.3 2.5e-17 63.7 0.3 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TBCC_N PF16752.5 ORF37507 - 0.072 13.5 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain YPEB PF14620.6 ORF2033 - 0.032 13.6 0.9 0.16 11.3 0.9 2.2 1 1 0 1 1 1 0 YpeB sporulation TPD52 PF04201.15 ORF2033 - 0.1 12.2 6.1 7.9 6.1 1.6 3.3 2 1 0 3 3 3 0 Tumour protein D52 family CLZ PF16526.5 ORF2033 - 0.15 12.5 6.1 0.26 11.7 3.3 3.0 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Peptidase_M1 PF01433.20 ORF134497 - 4.5e-41 140.8 0.1 9.4e-41 139.8 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M1 domain Leuk-A4-hydro_C PF09127.11 ORF134497 - 5.3e-27 94.2 0.0 4.1e-26 91.3 0.0 2.2 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1_N PF17900.1 ORF134497 - 1.4e-17 64.4 0.3 2.5e-17 63.7 0.3 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TBCC_N PF16752.5 ORF134497 - 0.072 13.5 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain Thioesterase PF00975.20 ORF73220 - 3.6e-13 50.2 0.1 1e-12 48.7 0.1 1.8 1 0 0 1 1 1 1 Thioesterase domain KAsynt_C_assoc PF16197.5 ORF73220 - 6.8e-08 33.0 0.0 3.9e-05 24.1 0.0 2.6 2 0 0 2 2 2 2 Ketoacyl-synthetase C-terminal extension Abhydrolase_6 PF12697.7 ORF73220 - 0.032 14.8 0.0 0.088 13.4 0.0 1.8 2 0 0 2 2 2 0 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF73220 - 0.039 13.2 0.1 0.095 12.0 0.1 1.6 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF73220 - 0.088 12.4 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Pkinase PF00069.25 ORF51607 - 2.9e-59 200.6 0.0 6.3e-59 199.5 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF51607 - 9.4e-28 97.2 0.0 1.8e-27 96.2 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase cNMP_binding PF00027.29 ORF51607 - 2.8e-19 69.0 0.1 1.1e-16 60.6 0.0 3.1 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain Kinase-like PF14531.6 ORF51607 - 4.4e-06 26.2 0.0 7.7e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF51607 - 0.02 13.9 0.0 0.02 13.9 0.0 2.8 3 0 0 3 3 3 0 Seadornavirus VP7 APH PF01636.23 ORF51607 - 0.18 11.7 0.0 0.33 10.8 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF1673 PF07895.11 ORF51399 - 0.063 13.0 1.1 0.13 12.0 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) Peptidase_M1 PF01433.20 ORF32370 - 8.9e-40 136.6 1.7 1.3e-39 136.0 1.7 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF32370 - 3.5e-24 86.0 0.7 5.7e-24 85.3 0.7 1.3 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF32370 - 6.2e-16 58.5 0.0 1.8e-15 57.0 0.0 1.8 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Myosin_TH1 PF06017.13 ORF32370 - 0.13 12.0 0.6 1.1 8.8 0.0 2.5 3 0 0 3 3 3 0 Unconventional myosin tail, actin- and lipid-binding DUF1673 PF07895.11 ORF28419 - 0.063 13.0 1.1 0.13 12.0 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) NOG1_N PF17835.1 ORF9572 - 1.5e-50 171.3 0.2 1.5e-50 171.3 0.2 2.2 2 0 0 2 2 2 1 NOG1 N-terminal helical domain NOG1 PF06858.14 ORF9572 - 1.9e-24 85.2 0.2 8.4e-24 83.1 0.0 2.2 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) NOGCT PF08155.11 ORF9572 - 7.1e-24 83.5 1.9 1.4e-23 82.6 0.5 2.1 2 0 0 2 2 2 1 NOGCT (NUC087) domain MMR_HSR1 PF01926.23 ORF9572 - 1.3e-16 60.7 0.0 2.9e-16 59.5 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF9572 - 7e-10 38.6 0.0 1.3e-09 37.8 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Ras PF00071.22 ORF9572 - 6e-06 25.9 0.0 1.6e-05 24.5 0.0 1.8 1 1 0 1 1 1 1 Ras family Arf PF00025.21 ORF9572 - 0.0004 19.9 0.5 0.0012 18.3 0.0 2.0 3 0 0 3 3 3 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF9572 - 0.0033 17.4 1.1 1.1 9.2 0.0 3.4 3 1 0 3 3 3 1 RsgA GTPase AIG1 PF04548.16 ORF9572 - 0.052 12.9 0.2 0.12 11.7 0.0 1.8 2 0 0 2 2 2 0 AIG1 family MeaB PF03308.16 ORF9572 - 0.084 11.8 3.1 9 5.2 0.0 3.1 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AMP-binding PF00501.28 ORF92261 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF92261 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF92261 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF87280 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF87280 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF87280 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF85233 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF85233 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF85233 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF68173 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF68173 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF68173 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF63070 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF63070 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF63070 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF60631 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF60631 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF60631 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF57018 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF57018 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF57018 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF4891 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF4891 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF4891 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain HECT PF00632.25 ORF29611 - 3.9e-49 167.8 0.0 6.9e-49 167.0 0.0 1.3 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) ABC_tran_CTD PF16326.5 ORF29611 - 0.066 13.5 0.4 0.2 11.9 0.4 1.8 1 0 0 1 1 1 0 ABC transporter C-terminal domain AMP-binding PF00501.28 ORF29466 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF29466 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF29466 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF147972 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF147972 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF147972 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DnaJ PF00226.31 ORF135380 - 1.8e-19 69.6 1.2 5.1e-19 68.1 1.2 1.8 1 0 0 1 1 1 1 DnaJ domain Sec63 PF02889.16 ORF135380 - 2.8e-17 62.7 4.0 4.1e-17 62.2 4.0 1.2 1 0 0 1 1 1 1 Sec63 Brl domain DUF2207 PF09972.9 ORF135380 - 0.006 15.4 0.1 0.039 12.7 0.0 2.3 2 1 0 2 2 2 1 Predicted membrane protein (DUF2207) Wzy_C PF04932.15 ORF135380 - 0.024 14.3 0.1 4.5 6.9 0.1 2.3 2 0 0 2 2 2 0 O-Antigen ligase SCAMP PF04144.13 ORF135380 - 0.1 12.9 0.1 0.1 12.9 0.1 2.9 2 1 0 2 2 2 0 SCAMP family PspB PF06667.12 ORF135380 - 0.53 10.4 0.0 0.53 10.4 0.0 2.6 2 0 0 2 2 2 0 Phage shock protein B DUF2615 PF11027.8 ORF135380 - 1.1 9.5 3.5 33 4.7 0.1 3.4 2 1 1 3 3 3 0 Protein of unknown function (DUF2615) AMP-binding PF00501.28 ORF132866 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF132866 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF132866 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF129936 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF129936 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF129936 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF116982 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF116982 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF116982 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks10.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks10.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks10.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks10.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:00:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- POLO_box PF00659.18 NODE_34614_length_625_cov_57.735593_g27668_i0reverse_frame_1 - 1.9e-09 37.6 0.3 3.8e-09 36.6 0.1 1.6 2 0 0 2 2 2 1 POLO box duplicated region Ndufs5 PF10200.9 NODE_34614_length_625_cov_57.735593_g27668_i0reverse_frame_1 - 0.028 14.7 0.2 0.064 13.5 0.2 1.6 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa DUF4431 PF14485.6 NODE_34614_length_625_cov_57.735593_g27668_i0forward_frame_1 - 0.17 11.7 0.2 0.63 9.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) DUF4506 PF14958.6 NODE_34582_length_625_cov_448.359322_g23750_i1forward_frame_1 - 0.0042 16.6 1.1 0.0099 15.4 0.9 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4506) Ole-e-6 PF09253.10 NODE_34581_length_625_cov_462.535593_g27639_i0reverse_frame_1 - 0.25 11.3 8.2 1.5 8.8 8.2 2.3 1 1 0 1 1 1 0 Pollen allergen ole e 6 PEX-1N PF09262.11 NODE_34504_length_627_cov_98.545608_g27570_i0forward_frame_1 - 3.8e-12 46.5 0.0 6.4e-12 45.7 0.0 1.4 1 0 0 1 1 1 1 Peroxisome biogenesis factor 1, N-terminal SRP14 PF02290.15 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_1 - 3.9e-05 23.9 0.4 3.9e-05 23.9 0.4 2.3 1 1 1 2 2 2 1 Signal recognition particle 14kD protein FG-GAP PF01839.23 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_1 - 0.062 13.4 0.0 0.092 12.9 0.0 1.3 1 0 0 1 1 1 0 FG-GAP repeat ArAE_2_N PF10337.9 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_1 - 1.3 7.9 3.0 2.1 7.3 3.0 1.2 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal O-antigen_lig PF13425.6 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_1 - 7.7 5.2 6.3 9.1 4.9 6.3 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3487 PF11990.8 NODE_34472_length_628_cov_2.537943_g27539_i0forward_frame_2 - 0.12 12.2 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DMT_YdcZ PF04657.13 NODE_34442_length_628_cov_168.527825_g27510_i0reverse_frame_2 - 1.5e-08 35.1 0.6 2e-08 34.6 0.6 1.1 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ GATA PF00320.27 NODE_34435_length_628_cov_290.413153_g27503_i0forward_frame_2 - 0.58 9.8 6.3 12 5.6 0.7 3.2 3 0 0 3 3 3 0 GATA zinc finger NUC130_3NT PF08158.12 NODE_34421_length_629_cov_3.183502_g27493_i0forward_frame_3 - 0.048 14.0 2.3 0.11 12.9 2.3 1.5 1 0 0 1 1 1 0 NUC130/3NT domain DUF3678 PF12435.8 NODE_34402_length_629_cov_97.757576_g27476_i0reverse_frame_3 - 3.9 6.9 10.8 3.8 7.0 1.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) Sec3-PIP2_bind PF15277.6 NODE_34396_length_629_cov_166.353535_g27471_i0forward_frame_3 - 0.085 13.0 0.0 0.22 11.7 0.0 1.7 2 0 0 2 2 2 0 Exocyst complex component SEC3 N-terminal PIP2 binding PH V-SNARE PF05008.15 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 1.2e-11 44.9 0.9 3.2e-11 43.4 0.9 1.8 1 0 0 1 1 1 1 Vesicle transport v-SNARE protein N-terminus Remorin_C PF03763.13 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.0067 16.3 1.3 0.014 15.3 1.3 1.5 1 0 0 1 1 1 1 Remorin, C-terminal region DUF2730 PF10805.8 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.037 14.1 0.7 0.12 12.5 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) DUF5618 PF18498.1 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.058 13.6 0.6 0.058 13.6 0.6 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF5618) Uds1 PF15456.6 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.065 13.4 8.5 0.78 9.9 2.8 2.3 1 1 1 2 2 2 0 Up-regulated During Septation Tup_N PF08581.10 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.13 12.6 6.4 0.061 13.6 1.7 2.8 1 1 2 3 3 3 0 Tup N-terminal Exonuc_VII_L PF02601.15 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.13 11.8 4.3 0.16 11.5 4.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit ALMT PF11744.8 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.17 10.7 9.6 0.2 10.4 9.6 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Lebercilin PF15619.6 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.21 11.2 8.6 0.053 13.2 3.0 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF489 PF04356.12 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.25 11.4 4.0 5.5 7.0 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF489) DUF2408 PF10303.9 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.41 11.2 5.8 0.6 10.7 5.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) BORCS7 PF16088.5 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.45 10.8 6.8 0.26 11.6 2.4 2.4 1 1 1 2 2 2 0 BLOC-1-related complex sub-unit 7 Tweety PF04906.13 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 0.81 8.3 3.4 8.7 4.9 0.2 2.6 1 1 2 3 3 3 0 Tweety TMPIT PF07851.13 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 4.7 6.4 8.6 16 4.6 8.6 1.8 1 1 1 2 2 2 0 TMPIT-like protein Uso1_p115_C PF04871.13 NODE_34391_length_629_cov_424.493266_g27467_i0reverse_frame_3 - 7.4 7.0 8.9 4.1 7.8 3.0 2.3 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region MFS_1 PF07690.16 NODE_34371_length_630_cov_3.715966_g27451_i0reverse_frame_3 - 1.7e-10 40.4 24.7 2e-10 40.1 24.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Alpha-amylase PF00128.24 NODE_34359_length_630_cov_94.831933_g27440_i0reverse_frame_2 - 9.8e-22 77.9 0.0 1.3e-21 77.6 0.0 1.0 1 0 0 1 1 1 1 Alpha amylase, catalytic domain HCV_NS2 PF01538.18 NODE_34337_length_630_cov_430.839041_g27421_i0reverse_frame_2 - 0.1 12.2 0.3 0.1 12.2 0.3 1.5 2 0 0 2 2 2 0 Hepatitis C virus non-structural protein NS2 Stc1 PF12898.7 ORF97336 - 0.16 12.5 19.1 8.3 7.0 5.3 4.4 2 2 0 2 2 2 0 Stc1 domain zf-BED PF02892.15 ORF97336 - 0.18 11.8 0.0 0.18 11.8 0.0 3.6 4 0 0 4 4 4 0 BED zinc finger Fer4_14 PF13394.6 ORF97336 - 2.8 8.1 11.4 22 5.2 0.1 4.1 4 0 0 4 4 4 0 4Fe-4S single cluster domain TIM PF00121.18 ORF95395 - 5.6e-77 258.4 0.7 6.3e-77 258.2 0.7 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase Sugar_tr PF00083.24 ORF9505 - 3.4e-13 49.3 9.3 1.3e-12 47.4 9.3 2.4 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF9505 - 4.5e-09 35.7 6.6 6.5e-09 35.2 6.6 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Zip PF02535.22 ORF9505 - 0.011 15.0 0.1 0.011 15.0 0.1 2.4 2 1 1 3 3 3 0 ZIP Zinc transporter TRI12 PF06609.13 ORF9505 - 0.038 12.4 1.8 0.045 12.2 0.9 1.3 1 1 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) COX4_pro PF03626.14 ORF9505 - 0.37 11.2 7.7 0.23 11.9 5.2 1.9 1 1 1 2 2 2 0 Prokaryotic Cytochrome C oxidase subunit IV Ras PF00071.22 ORF93130 - 0.0059 16.2 0.1 0.012 15.2 0.1 1.6 2 0 0 2 2 2 1 Ras family TP2 PF01254.18 ORF91204 - 0.026 15.1 6.8 0.8 10.3 4.3 2.4 2 0 0 2 2 2 0 Nuclear transition protein 2 Proteasome PF00227.26 ORF9103 - 1.8e-31 109.1 0.0 2e-31 108.9 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit LtrA PF06772.11 ORF90287 - 3.7 6.7 8.0 0.18 11.0 2.6 1.6 2 0 0 2 2 2 0 Bacterial low temperature requirement A protein (LtrA) Importin_rep_3 PF18806.1 ORF89003 - 0.045 13.8 0.0 0.12 12.4 0.0 1.8 1 0 0 1 1 1 0 Importin 13 repeat JmjC PF02373.22 ORF88742 - 0.033 14.6 0.1 0.08 13.4 0.0 1.7 2 0 0 2 2 2 0 JmjC domain, hydroxylase Methyltransf_24 PF13578.6 ORF87728 - 2.1e-05 25.5 0.0 3.2e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF87728 - 0.0047 16.1 0.0 0.011 15.0 0.0 1.5 1 1 1 2 2 2 1 O-methyltransferase Phage_TAC_11 PF11836.8 ORF87629 - 0.053 13.6 0.5 0.094 12.8 0.5 1.5 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 U-box PF04564.15 ORF84426 - 0.0014 18.8 0.1 0.0029 17.7 0.1 1.5 1 0 0 1 1 1 1 U-box domain DUF123 PF01986.16 ORF84426 - 0.017 15.6 0.1 5.6 7.5 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function DUF123 zf-Nse PF11789.8 ORF84426 - 0.05 13.4 1.1 0.19 11.6 1.1 2.2 1 1 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit QSregVF PF13652.6 ORF84426 - 0.063 13.3 1.0 0.17 11.9 1.0 1.8 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor JAKMIP_CC3 PF16034.5 ORF84426 - 0.085 12.8 2.6 0.18 11.8 2.6 1.5 1 0 0 1 1 1 0 JAKMIP CC3 domain Csm1_N PF18504.1 ORF84426 - 0.099 13.0 2.5 0.24 11.8 2.5 1.7 1 0 0 1 1 1 0 Csm1 N-terminal domain DUF2570 PF10828.8 ORF84426 - 0.54 10.1 8.6 0.86 9.4 8.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) bZIP_2 PF07716.15 ORF84426 - 0.89 9.7 3.1 3.3 7.9 3.1 2.1 1 0 0 1 1 1 0 Basic region leucine zipper bZIP_1 PF00170.21 ORF84426 - 1.5 9.0 6.2 0.26 11.4 1.9 2.0 2 0 0 2 2 2 0 bZIP transcription factor DUF2072 PF09845.9 ORF77755 - 7.6 6.8 10.3 2.2 8.6 0.5 2.5 2 1 0 2 2 2 0 Zn-ribbon containing protein Ras PF00071.22 ORF7754 - 5.2e-53 179.0 0.3 6.3e-53 178.7 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF7754 - 4.7e-33 114.0 0.1 8.5e-33 113.1 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF7754 - 1.2e-14 54.1 0.0 1.5e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF7754 - 8.4e-08 32.3 0.0 1.6e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF7754 - 3.6e-07 29.9 0.5 1.4e-05 24.8 0.5 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF7754 - 7.1e-06 25.5 0.1 9e-06 25.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF7754 - 0.00012 21.6 0.8 0.0048 16.3 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit DUF4471 PF14740.6 ORF7754 - 0.00074 18.8 0.1 0.00089 18.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4471) RsgA_GTPase PF03193.16 ORF7754 - 0.00083 19.3 0.4 0.013 15.4 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 ORF7754 - 0.0011 18.8 0.4 0.0091 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF7754 - 0.0015 19.0 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF7754 - 0.0019 18.5 0.1 0.0038 17.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 ORF7754 - 0.0027 17.5 0.3 0.097 12.4 0.0 2.0 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein AAA_32 PF13654.6 ORF7754 - 0.0058 15.5 0.2 0.59 8.9 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF7754 - 0.0063 16.0 1.0 0.014 14.9 0.1 1.9 2 0 0 2 2 2 1 P-loop containing dynein motor region cobW PF02492.19 ORF7754 - 0.0067 16.0 0.0 0.016 14.8 0.0 1.5 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 ORF7754 - 0.0071 16.1 0.2 0.014 15.1 0.2 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 ORF7754 - 0.011 15.6 0.1 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 ORF7754 - 0.018 14.7 0.0 0.034 13.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Septin PF00735.18 ORF7754 - 0.02 14.2 0.1 0.04 13.2 0.1 1.5 1 0 0 1 1 1 0 Septin TniB PF05621.11 ORF7754 - 0.029 13.8 0.1 0.061 12.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial TniB protein ABC_tran PF00005.27 ORF7754 - 0.035 14.6 2.9 0.18 12.3 2.9 2.0 1 1 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 ORF7754 - 0.11 12.6 0.2 0.34 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF7754 - 0.11 12.3 0.7 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Ras PF00071.22 ORF74756 - 5.2e-53 179.0 0.3 6.3e-53 178.7 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF74756 - 4.7e-33 114.0 0.1 8.5e-33 113.1 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF74756 - 1.2e-14 54.1 0.0 1.5e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF74756 - 8.4e-08 32.3 0.0 1.6e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF74756 - 3.6e-07 29.9 0.5 1.4e-05 24.8 0.5 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF74756 - 7.1e-06 25.5 0.1 9e-06 25.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF74756 - 0.00012 21.6 0.8 0.0048 16.3 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit DUF4471 PF14740.6 ORF74756 - 0.00074 18.8 0.1 0.00089 18.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4471) RsgA_GTPase PF03193.16 ORF74756 - 0.00083 19.3 0.4 0.013 15.4 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 ORF74756 - 0.0011 18.8 0.4 0.0091 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF74756 - 0.0015 19.0 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF74756 - 0.0019 18.5 0.1 0.0038 17.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 ORF74756 - 0.0027 17.5 0.3 0.097 12.4 0.0 2.0 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein AAA_32 PF13654.6 ORF74756 - 0.0058 15.5 0.2 0.59 8.9 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF74756 - 0.0063 16.0 1.0 0.014 14.9 0.1 1.9 2 0 0 2 2 2 1 P-loop containing dynein motor region cobW PF02492.19 ORF74756 - 0.0067 16.0 0.0 0.016 14.8 0.0 1.5 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 ORF74756 - 0.0071 16.1 0.2 0.014 15.1 0.2 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 ORF74756 - 0.011 15.6 0.1 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 ORF74756 - 0.018 14.7 0.0 0.034 13.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Septin PF00735.18 ORF74756 - 0.02 14.2 0.1 0.04 13.2 0.1 1.5 1 0 0 1 1 1 0 Septin TniB PF05621.11 ORF74756 - 0.029 13.8 0.1 0.061 12.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial TniB protein ABC_tran PF00005.27 ORF74756 - 0.035 14.6 2.9 0.18 12.3 2.9 2.0 1 1 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 ORF74756 - 0.11 12.6 0.2 0.34 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF74756 - 0.11 12.3 0.7 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Herpes_UL6 PF01763.16 ORF73976 - 0.12 10.8 0.1 0.25 9.8 0.1 1.4 1 1 0 1 1 1 0 Herpesvirus UL6 like Thioredoxin_6 PF13848.6 ORF72685 - 0.0014 18.6 0.9 0.14 12.1 0.0 3.3 3 1 0 3 3 3 1 Thioredoxin-like domain Ras PF00071.22 ORF7176 - 5.2e-53 179.0 0.3 6.3e-53 178.7 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF7176 - 4.7e-33 114.0 0.1 8.5e-33 113.1 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF7176 - 1.2e-14 54.1 0.0 1.5e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF7176 - 8.4e-08 32.3 0.0 1.6e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF7176 - 3.6e-07 29.9 0.5 1.4e-05 24.8 0.5 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF7176 - 7.1e-06 25.5 0.1 9e-06 25.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF7176 - 0.00012 21.6 0.8 0.0048 16.3 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit DUF4471 PF14740.6 ORF7176 - 0.00074 18.8 0.1 0.00089 18.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4471) RsgA_GTPase PF03193.16 ORF7176 - 0.00083 19.3 0.4 0.013 15.4 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 ORF7176 - 0.0011 18.8 0.4 0.0091 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF7176 - 0.0015 19.0 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF7176 - 0.0019 18.5 0.1 0.0038 17.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 ORF7176 - 0.0027 17.5 0.3 0.097 12.4 0.0 2.0 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein AAA_32 PF13654.6 ORF7176 - 0.0058 15.5 0.2 0.59 8.9 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF7176 - 0.0063 16.0 1.0 0.014 14.9 0.1 1.9 2 0 0 2 2 2 1 P-loop containing dynein motor region cobW PF02492.19 ORF7176 - 0.0067 16.0 0.0 0.016 14.8 0.0 1.5 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 ORF7176 - 0.0071 16.1 0.2 0.014 15.1 0.2 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 ORF7176 - 0.011 15.6 0.1 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 ORF7176 - 0.018 14.7 0.0 0.034 13.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Septin PF00735.18 ORF7176 - 0.02 14.2 0.1 0.04 13.2 0.1 1.5 1 0 0 1 1 1 0 Septin TniB PF05621.11 ORF7176 - 0.029 13.8 0.1 0.061 12.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial TniB protein ABC_tran PF00005.27 ORF7176 - 0.035 14.6 2.9 0.18 12.3 2.9 2.0 1 1 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 ORF7176 - 0.11 12.6 0.2 0.34 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF7176 - 0.11 12.3 0.7 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Ras PF00071.22 ORF71417 - 5.2e-53 179.0 0.3 6.3e-53 178.7 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF71417 - 4.7e-33 114.0 0.1 8.5e-33 113.1 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF71417 - 1.2e-14 54.1 0.0 1.5e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF71417 - 8.4e-08 32.3 0.0 1.6e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF71417 - 3.6e-07 29.9 0.5 1.4e-05 24.8 0.5 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF71417 - 7.1e-06 25.5 0.1 9e-06 25.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF71417 - 0.00012 21.6 0.8 0.0048 16.3 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit DUF4471 PF14740.6 ORF71417 - 0.00074 18.8 0.1 0.00089 18.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4471) RsgA_GTPase PF03193.16 ORF71417 - 0.00083 19.3 0.4 0.013 15.4 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 ORF71417 - 0.0011 18.8 0.4 0.0091 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF71417 - 0.0015 19.0 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF71417 - 0.0019 18.5 0.1 0.0038 17.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 ORF71417 - 0.0027 17.5 0.3 0.097 12.4 0.0 2.0 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein AAA_32 PF13654.6 ORF71417 - 0.0058 15.5 0.2 0.59 8.9 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF71417 - 0.0063 16.0 1.0 0.014 14.9 0.1 1.9 2 0 0 2 2 2 1 P-loop containing dynein motor region cobW PF02492.19 ORF71417 - 0.0067 16.0 0.0 0.016 14.8 0.0 1.5 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 ORF71417 - 0.0071 16.1 0.2 0.014 15.1 0.2 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 ORF71417 - 0.011 15.6 0.1 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 ORF71417 - 0.018 14.7 0.0 0.034 13.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Septin PF00735.18 ORF71417 - 0.02 14.2 0.1 0.04 13.2 0.1 1.5 1 0 0 1 1 1 0 Septin TniB PF05621.11 ORF71417 - 0.029 13.8 0.1 0.061 12.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial TniB protein ABC_tran PF00005.27 ORF71417 - 0.035 14.6 2.9 0.18 12.3 2.9 2.0 1 1 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 ORF71417 - 0.11 12.6 0.2 0.34 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF71417 - 0.11 12.3 0.7 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Peptidase_M48 PF01435.18 ORF7047 - 9e-23 81.1 0.0 1.3e-22 80.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 MORN PF02493.20 ORF66629 - 3.2e-11 42.4 17.4 6.3e-05 22.6 0.2 4.5 4 0 0 4 4 4 3 MORN repeat Phage_TAC_11 PF11836.8 ORF6249 - 0.053 13.6 0.5 0.094 12.8 0.5 1.5 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 Ank_2 PF12796.7 ORF61355 - 4.1e-32 110.6 0.0 1.8e-09 38.0 0.0 2.8 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF61355 - 3.6e-19 68.9 0.3 6.5e-06 26.6 0.0 4.3 2 1 2 5 5 5 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF61355 - 3e-18 65.6 0.3 1.1e-05 25.6 0.0 4.9 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF61355 - 7.8e-18 64.1 1.2 1.6e-05 25.1 0.0 5.5 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF61355 - 4.5e-14 51.2 0.1 0.00072 19.8 0.0 5.4 5 1 1 6 6 6 3 Ankyrin repeat AAA PF00004.29 ORF61190 - 4.7e-06 27.1 0.0 7.6e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) COPI_C PF06957.11 ORF61190 - 0.5 9.1 8.5 0.64 8.7 8.5 1.1 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus Myc_N PF01056.18 ORF61190 - 0.9 9.4 6.4 3.7 7.3 7.4 1.4 2 0 0 2 2 2 0 Myc amino-terminal region FAM176 PF14851.6 ORF61190 - 1.8 8.2 5.6 2.8 7.6 5.6 1.3 1 0 0 1 1 1 0 FAM176 family TFIIS_M PF07500.14 ORF59803 - 1.6e-18 67.2 2.7 2.1e-18 66.8 2.7 1.2 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain TFIIS_C PF01096.18 ORF59803 - 0.29 11.0 6.2 2 8.3 6.2 2.3 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) DUF4207 PF13904.6 ORF58035 - 4.5e-05 23.3 23.3 4.5e-05 23.3 23.3 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4207) TMEM206 PF15122.6 ORF58035 - 0.011 14.9 4.1 0.014 14.5 3.7 1.3 1 1 0 1 1 1 0 TMEM206 protein family Viral_P18 PF04521.13 ORF58035 - 0.023 14.5 5.2 3 7.6 0.0 2.7 1 1 1 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein AAA_23 PF13476.6 ORF58035 - 1.1 9.7 14.6 1.4 9.4 14.6 1.1 1 0 0 1 1 1 0 AAA domain DUF3112 PF11309.8 ORF55487 - 2.6 7.4 5.1 1.1 8.7 2.6 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3112) TMEM132D_C PF15706.5 ORF55443 - 1.4 8.7 7.1 2.5 7.9 0.5 2.7 3 0 0 3 3 3 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term CCDC24 PF15669.5 ORF54948 - 0.13 12.1 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family Ras PF00071.22 ORF52707 - 5.2e-53 179.0 0.3 6.3e-53 178.7 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF52707 - 4.7e-33 114.0 0.1 8.5e-33 113.1 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF52707 - 1.2e-14 54.1 0.0 1.5e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF52707 - 8.4e-08 32.3 0.0 1.6e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF52707 - 3.6e-07 29.9 0.5 1.4e-05 24.8 0.5 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF52707 - 7.1e-06 25.5 0.1 9e-06 25.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF52707 - 0.00012 21.6 0.8 0.0048 16.3 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit DUF4471 PF14740.6 ORF52707 - 0.00074 18.8 0.1 0.00089 18.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4471) RsgA_GTPase PF03193.16 ORF52707 - 0.00083 19.3 0.4 0.013 15.4 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 ORF52707 - 0.0011 18.8 0.4 0.0091 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF52707 - 0.0015 19.0 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF52707 - 0.0019 18.5 0.1 0.0038 17.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 ORF52707 - 0.0027 17.5 0.3 0.097 12.4 0.0 2.0 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein AAA_32 PF13654.6 ORF52707 - 0.0058 15.5 0.2 0.59 8.9 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF52707 - 0.0063 16.0 1.0 0.014 14.9 0.1 1.9 2 0 0 2 2 2 1 P-loop containing dynein motor region cobW PF02492.19 ORF52707 - 0.0067 16.0 0.0 0.016 14.8 0.0 1.5 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 ORF52707 - 0.0071 16.1 0.2 0.014 15.1 0.2 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 ORF52707 - 0.011 15.6 0.1 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 ORF52707 - 0.018 14.7 0.0 0.034 13.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Septin PF00735.18 ORF52707 - 0.02 14.2 0.1 0.04 13.2 0.1 1.5 1 0 0 1 1 1 0 Septin TniB PF05621.11 ORF52707 - 0.029 13.8 0.1 0.061 12.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial TniB protein ABC_tran PF00005.27 ORF52707 - 0.035 14.6 2.9 0.18 12.3 2.9 2.0 1 1 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 ORF52707 - 0.11 12.6 0.2 0.34 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF52707 - 0.11 12.3 0.7 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Pkinase_Tyr PF07714.17 ORF51617 - 9.4e-35 120.1 0.0 3.3e-28 98.7 0.0 2.0 1 1 1 2 2 2 2 Protein tyrosine kinase Pkinase PF00069.25 ORF51617 - 4e-28 98.5 0.0 5.2e-25 88.3 0.0 2.0 1 1 1 2 2 2 2 Protein kinase domain Pkinase_fungal PF17667.1 ORF51617 - 0.11 11.2 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase DUF3082 PF11282.8 ORF50328 - 5.6e-20 71.4 0.5 9.2e-20 70.7 0.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3082) Pyr_redox_2 PF07992.14 ORF49618 - 1.4e-11 44.2 0.0 1.7e-11 43.9 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF49618 - 3.2e-06 27.6 0.1 1.6e-05 25.3 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NUDIX PF00293.28 ORF48634 - 1e-11 45.0 0.3 1.5e-11 44.4 0.3 1.3 1 0 0 1 1 1 1 NUDIX domain DUF3892 PF13031.6 ORF48634 - 0.12 13.0 0.1 2.7 8.7 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3892) HTH_Tnp_1 PF01527.20 ORF48634 - 0.13 12.6 2.4 0.91 9.9 0.1 2.3 2 0 0 2 2 2 0 Transposase Baculo_11_kDa PF06143.11 ORF47353 - 0.015 14.9 0.7 0.015 14.9 0.7 2.6 2 1 1 3 3 3 0 Baculovirus 11 kDa family ApeA_NTD1 PF18862.1 ORF47353 - 0.04 13.5 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 ApeA N-terminal domain 1 Amnionless PF14828.6 ORF47353 - 2.1 7.1 3.8 1.2 7.9 0.0 2.2 2 1 1 3 3 3 0 Amnionless WD40 PF00400.32 ORF44501 - 1.1e-06 29.2 0.2 0.00018 22.2 0.1 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat Glyco_hydro_38C PF07748.13 ORF44501 - 0.027 14.5 0.3 0.046 13.8 0.3 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal domain DUF5069 PF16798.5 ORF44353 - 0.014 15.6 2.1 0.014 15.6 2.1 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF5069) DUF3584 PF12128.8 ORF44353 - 0.037 11.5 30.1 0.044 11.3 30.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) THEG PF14912.6 ORF44353 - 0.067 13.6 0.5 0.17 12.3 0.5 1.7 1 0 0 1 1 1 0 Testicular haploid expressed repeat BCAS2 PF05700.11 ORF44353 - 0.51 10.0 29.8 2.5 7.8 0.6 3.4 1 1 2 3 3 3 0 Breast carcinoma amplified sequence 2 (BCAS2) TPR_MLP1_2 PF07926.12 ORF44353 - 0.93 9.6 46.6 0.4 10.8 21.8 3.5 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein FAM76 PF16046.5 ORF44353 - 1.3 8.3 21.7 2.2 7.6 21.7 1.4 1 1 0 1 1 1 0 FAM76 protein DUF4407 PF14362.6 ORF44353 - 9.6 5.5 29.3 99 2.1 29.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) ZapB PF06005.12 ORF44353 - 9.7 6.7 49.0 3.6 8.1 4.2 4.9 1 1 4 5 5 5 0 Cell division protein ZapB Arrestin_C PF02752.22 ORF4434 - 1.6e-06 28.6 0.0 3.1e-06 27.7 0.0 1.4 1 1 0 1 1 1 1 Arrestin (or S-antigen), C-terminal domain DUF5593 PF18007.1 ORF43406 - 0.055 14.2 0.4 0.16 12.7 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF5593) Es2 PF09751.9 ORF43406 - 0.52 10.0 3.9 0.11 12.2 0.9 1.3 2 0 0 2 2 2 0 Nuclear protein Es2 Ribosomal_L3 PF00297.22 ORF43202 - 4.5e-15 55.5 8.1 1.1e-14 54.2 6.4 2.1 1 1 1 2 2 2 2 Ribosomal protein L3 DUF2501 PF10696.9 ORF40250 - 6.9e-27 93.5 6.2 6.9e-27 93.5 6.2 1.7 2 1 0 2 2 2 1 Protein of unknown function (DUF2501) Alkyl_sulf_dimr PF14863.6 ORF40250 - 0.22 12.0 1.3 0.49 10.9 1.2 1.6 1 1 1 2 2 2 0 Alkyl sulfatase dimerisation 2-oxogl_dehyd_N PF16078.5 ORF37910 - 0.051 13.2 1.1 0.87 9.2 0.1 2.2 2 0 0 2 2 2 0 2-oxoglutarate dehydrogenase N-terminus Asp_protease PF09668.10 ORF36126 - 2e-15 56.7 0.2 3.8e-15 55.8 0.2 1.5 1 0 0 1 1 1 1 Aspartyl protease ubiquitin PF00240.23 ORF36126 - 1e-08 34.8 0.2 1.5e-08 34.3 0.2 1.3 1 0 0 1 1 1 1 Ubiquitin family gag-asp_proteas PF13975.6 ORF36126 - 4.5e-05 23.9 0.6 0.00012 22.5 0.0 2.0 2 0 0 2 2 2 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 ORF36126 - 0.018 15.7 0.0 0.05 14.2 0.0 1.8 1 0 0 1 1 1 0 Aspartyl protease Ubiquitin_4 PF18036.1 ORF36126 - 0.027 14.5 1.0 1.4 9.0 0.0 2.3 1 1 1 2 2 2 0 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF36126 - 0.076 13.0 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain RVP PF00077.20 ORF36126 - 0.096 13.0 0.0 0.18 12.1 0.0 1.5 1 0 0 1 1 1 0 Retroviral aspartyl protease UN_NPL4 PF11543.8 ORF36126 - 0.14 12.7 0.1 0.34 11.4 0.1 1.7 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Nrap_D3 PF17404.2 ORF36126 - 0.15 12.1 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Nrap protein domain 3 EMP24_GP25L PF01105.24 ORF29439 - 2.8e-18 66.5 1.4 3.2e-18 66.3 1.4 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD FANCI_HD2 PF14680.6 ORF29439 - 0.00059 19.2 0.4 0.001 18.3 0.4 1.3 1 0 0 1 1 1 1 FANCI helical domain 2 CLPTM1 PF05602.12 ORF29439 - 0.0068 15.5 1.7 0.0071 15.4 0.9 1.4 2 0 0 2 2 2 1 Cleft lip and palate transmembrane protein 1 (CLPTM1) DUF4363 PF14276.6 ORF29439 - 0.056 13.6 0.6 0.12 12.5 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4363) Orf78 PF06024.12 ORF29439 - 1.6 9.0 5.2 0.12 12.6 0.5 1.6 2 0 0 2 2 2 0 Orf78 (ac78) EF-hand_1 PF00036.32 ORF28664 - 7.4e-14 50.2 3.7 2.7e-06 26.5 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF28664 - 3.4e-12 46.6 1.5 7.7e-12 45.5 1.2 1.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF28664 - 4e-12 45.0 0.4 3.5e-06 26.5 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF28664 - 1.3e-07 31.4 4.4 0.0059 16.4 0.0 3.0 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF28664 - 1.2e-05 24.6 4.9 0.00016 21.0 0.1 2.6 2 1 0 2 2 2 1 EF hand DUF1654 PF07867.11 ORF28664 - 0.0087 15.8 0.3 0.077 12.7 0.2 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1654) EF-hand_13 PF17958.1 ORF28664 - 0.13 12.1 0.0 1.4 8.8 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain DUF2179 PF10035.9 ORF28664 - 0.18 11.6 0.5 12 5.8 0.1 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2179) DUF3674 PF12426.8 ORF26843 - 5.5 7.1 7.1 0.35 10.9 1.5 1.9 2 0 0 2 2 2 0 RNA dependent RNA polymerase DUF4207 PF13904.6 ORF25353 - 4.5e-05 23.3 23.3 4.5e-05 23.3 23.3 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4207) TMEM206 PF15122.6 ORF25353 - 0.011 14.9 4.1 0.014 14.5 3.7 1.3 1 1 0 1 1 1 0 TMEM206 protein family Viral_P18 PF04521.13 ORF25353 - 0.023 14.5 5.2 3 7.6 0.0 2.7 1 1 1 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein AAA_23 PF13476.6 ORF25353 - 1.1 9.7 14.6 1.4 9.4 14.6 1.1 1 0 0 1 1 1 0 AAA domain Aldose_epim PF01263.20 ORF24544 - 2.1e-39 135.6 0.0 2.4e-39 135.4 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase DUF924 PF06041.11 ORF1975 - 7e-46 156.6 3.8 7.9e-46 156.4 3.8 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) Sigma70_r2 PF04542.14 ORF1975 - 0.051 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70 region 2 Ras PF00071.22 ORF1847 - 5.2e-53 179.0 0.3 6.3e-53 178.7 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF1847 - 4.7e-33 114.0 0.1 8.5e-33 113.1 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF1847 - 1.2e-14 54.1 0.0 1.5e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF1847 - 8.4e-08 32.3 0.0 1.6e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF1847 - 3.6e-07 29.9 0.5 1.4e-05 24.8 0.5 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF1847 - 7.1e-06 25.5 0.1 9e-06 25.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF1847 - 0.00012 21.6 0.8 0.0048 16.3 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit DUF4471 PF14740.6 ORF1847 - 0.00074 18.8 0.1 0.00089 18.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4471) RsgA_GTPase PF03193.16 ORF1847 - 0.00083 19.3 0.4 0.013 15.4 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 ORF1847 - 0.0011 18.8 0.4 0.0091 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF1847 - 0.0015 19.0 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF1847 - 0.0019 18.5 0.1 0.0038 17.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 ORF1847 - 0.0027 17.5 0.3 0.097 12.4 0.0 2.0 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein AAA_32 PF13654.6 ORF1847 - 0.0058 15.5 0.2 0.59 8.9 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF1847 - 0.0063 16.0 1.0 0.014 14.9 0.1 1.9 2 0 0 2 2 2 1 P-loop containing dynein motor region cobW PF02492.19 ORF1847 - 0.0067 16.0 0.0 0.016 14.8 0.0 1.5 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 ORF1847 - 0.0071 16.1 0.2 0.014 15.1 0.2 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 ORF1847 - 0.011 15.6 0.1 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 ORF1847 - 0.018 14.7 0.0 0.034 13.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Septin PF00735.18 ORF1847 - 0.02 14.2 0.1 0.04 13.2 0.1 1.5 1 0 0 1 1 1 0 Septin TniB PF05621.11 ORF1847 - 0.029 13.8 0.1 0.061 12.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial TniB protein ABC_tran PF00005.27 ORF1847 - 0.035 14.6 2.9 0.18 12.3 2.9 2.0 1 1 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 ORF1847 - 0.11 12.6 0.2 0.34 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF1847 - 0.11 12.3 0.7 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea DUF2157 PF09925.9 ORF17216 - 0.01 15.7 0.1 0.48 10.2 0.1 2.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) APG6_N PF17675.1 ORF152768 - 0.006 17.1 8.7 0.006 17.1 8.7 2.8 2 1 1 3 3 3 1 Apg6 coiled-coil region UPF0242 PF06785.11 ORF152768 - 0.018 15.2 25.3 0.42 10.7 1.9 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Csm1_N PF18504.1 ORF152768 - 0.023 15.0 1.7 0.023 15.0 1.7 4.7 1 1 2 4 4 4 0 Csm1 N-terminal domain bZIP_1 PF00170.21 ORF152768 - 0.18 11.9 27.2 3.9 7.6 1.7 4.4 3 1 0 4 4 4 0 bZIP transcription factor FlxA PF14282.6 ORF152768 - 0.21 11.6 18.0 0.41 10.7 3.5 3.6 2 1 2 4 4 4 0 FlxA-like protein DUF4407 PF14362.6 ORF152768 - 0.22 10.8 11.3 1 8.7 11.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FlaC_arch PF05377.11 ORF152768 - 0.44 11.0 22.7 0.5 10.8 1.9 4.7 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) CENP-F_leu_zip PF10473.9 ORF152768 - 0.48 10.4 27.8 0.17 11.9 1.3 3.9 1 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1192 PF06698.11 ORF152768 - 0.49 10.5 3.7 2.6 8.2 0.2 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1192) DUF4790 PF16037.5 ORF152768 - 1.2 9.6 7.6 0.18 12.3 1.5 2.6 2 2 1 3 3 3 0 Domain of unknown function (DUF4790) FapA PF03961.13 ORF152768 - 1.5 7.4 23.9 0.28 9.7 11.8 2.3 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF948 PF06103.11 ORF152768 - 1.6 9.0 13.7 8.4 6.7 0.3 3.9 1 1 3 4 4 4 0 Bacterial protein of unknown function (DUF948) DUF2203 PF09969.9 ORF152768 - 2.8 8.7 15.8 4 8.2 0.9 3.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF1664 PF07889.12 ORF152768 - 3.2 7.8 19.7 6.1 6.9 4.4 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DUF724 PF05266.14 ORF152768 - 4 7.2 22.6 0.49 10.2 5.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF724) GAS PF13851.6 ORF152768 - 6.4 6.1 33.2 2.6 7.4 9.8 3.3 1 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding FPP PF05911.11 ORF149107 - 0.0033 15.7 8.7 0.0045 15.3 8.7 1.1 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil DHR10 PF18595.1 ORF149107 - 0.011 15.8 3.2 0.011 15.8 3.2 2.1 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Fib_alpha PF08702.10 ORF149107 - 0.011 15.9 9.6 0.011 15.9 9.6 1.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family PspA_IM30 PF04012.12 ORF149107 - 0.017 14.7 3.3 0.77 9.3 0.2 2.2 1 1 1 2 2 2 0 PspA/IM30 family DUF5082 PF16888.5 ORF149107 - 0.018 15.3 4.6 0.018 15.3 4.6 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) Cep57_CLD PF14073.6 ORF149107 - 0.02 14.9 8.6 0.038 14.0 8.6 1.4 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 Sec2p PF06428.11 ORF149107 - 0.024 14.6 2.6 0.028 14.4 0.5 2.2 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p TACC_C PF05010.14 ORF149107 - 0.024 14.4 10.1 0.047 13.5 10.1 1.4 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal GAS PF13851.6 ORF149107 - 0.028 13.8 8.1 0.06 12.7 8.1 1.6 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Csm1_N PF18504.1 ORF149107 - 0.066 13.6 0.2 0.066 13.6 0.2 3.2 2 1 0 3 3 3 0 Csm1 N-terminal domain Syntaxin-6_N PF09177.11 ORF149107 - 0.081 13.5 3.2 0.19 12.3 3.2 1.6 1 0 0 1 1 1 0 Syntaxin 6, N-terminal DUF3450 PF11932.8 ORF149107 - 0.16 11.3 7.4 0.042 13.1 4.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF4349 PF14257.6 ORF149107 - 0.19 11.2 2.0 0.27 10.7 2.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF5365 PF17326.2 ORF149107 - 0.29 11.6 4.3 0.14 12.6 2.1 1.6 2 0 0 2 2 1 0 Family of unknown function (DUF5365) WEMBL PF05701.11 ORF149107 - 0.42 9.2 7.9 0.51 9.0 7.9 1.1 1 0 0 1 1 1 0 Weak chloroplast movement under blue light Phage_GP20 PF06810.11 ORF149107 - 0.47 10.2 6.3 0.12 12.1 2.1 2.1 2 1 1 3 3 3 0 Phage minor structural protein GP20 UPF0242 PF06785.11 ORF149107 - 0.58 10.2 13.3 0.16 12.0 9.1 2.0 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus HAUS6_N PF14661.6 ORF149107 - 0.68 9.5 5.9 1.1 8.8 5.9 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus SlyX PF04102.12 ORF149107 - 0.93 10.2 5.8 0.75 10.5 0.6 2.7 2 1 0 3 3 2 0 SlyX FliJ PF02050.16 ORF149107 - 1.8 8.8 9.7 0.99 9.6 7.5 1.7 2 0 0 2 2 1 0 Flagellar FliJ protein PIN_8 PF18476.1 ORF149107 - 2.1 8.1 8.9 0.66 9.8 5.4 1.8 2 0 0 2 2 2 0 PIN like domain ABC_tran_CTD PF16326.5 ORF149107 - 2.3 8.5 7.1 6.9 7.0 2.8 3.0 2 1 1 3 3 3 0 ABC transporter C-terminal domain APG6_N PF17675.1 ORF149107 - 2.8 8.5 9.0 5.7 7.5 9.0 1.5 1 0 0 1 1 1 0 Apg6 coiled-coil region TSC22 PF01166.18 ORF149107 - 3.3 8.1 10.4 1.2 9.4 0.3 3.4 2 1 2 4 4 3 0 TSC-22/dip/bun family FAM76 PF16046.5 ORF149107 - 3.4 6.9 10.0 0.62 9.4 6.8 1.4 2 0 0 2 2 2 0 FAM76 protein DUF4407 PF14362.6 ORF149107 - 3.7 6.8 6.1 4.6 6.5 2.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) ZapB PF06005.12 ORF149107 - 6.2 7.3 8.6 2.6 8.5 0.7 2.8 2 1 1 3 3 2 0 Cell division protein ZapB PRKG1_interact PF15898.5 ORF149107 - 8.8 7.3 14.0 0.35 11.8 2.5 2.6 2 1 1 3 3 3 0 cGMP-dependent protein kinase interacting domain Aldose_epim PF01263.20 ORF148463 - 2.1e-39 135.6 0.0 2.4e-39 135.4 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase Lys PF00062.20 ORF147356 - 0.026 14.8 1.0 0.042 14.1 1.0 1.4 1 1 0 1 1 1 0 C-type lysozyme/alpha-lactalbumin family GRIP PF01465.20 ORF147356 - 0.049 13.6 0.3 0.089 12.7 0.3 1.5 1 0 0 1 1 1 0 GRIP domain SH3_15 PF18346.1 ORF146515 - 0.0002 21.6 3.4 0.15 12.4 0.6 2.6 2 1 0 2 2 2 2 Mind bomb SH3 repeat domain DUF3553 PF12073.8 ORF146515 - 0.0011 18.7 0.9 0.068 12.9 0.2 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3553) Pellino PF04710.14 ORF143750 - 0.01 14.5 1.2 0.011 14.4 1.2 1.1 1 0 0 1 1 1 0 Pellino EF-hand_7 PF13499.6 ORF143750 - 0.011 16.2 1.1 0.15 12.5 1.1 2.6 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF143750 - 0.13 12.3 0.7 28 5.0 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain Sigma_reg_C PF13791.6 ORF143750 - 3 8.0 10.5 1.4 9.1 5.0 2.9 2 1 1 3 3 3 0 Sigma factor regulator C-terminal DUF3614 PF12267.8 ORF143090 - 0.029 14.9 0.1 0.038 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3614) F-box PF00646.33 ORF141820 - 4.2e-07 29.7 0.1 4.2e-06 26.5 0.0 2.3 2 0 0 2 2 2 1 F-box domain MT PF12777.7 ORF141820 - 0.03 13.4 0.1 0.039 13.0 0.1 1.2 1 0 0 1 1 1 0 Microtubule-binding stalk of dynein motor F-box-like PF12937.7 ORF141820 - 0.061 13.2 0.1 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 F-box-like SelB-wing_3 PF09107.11 ORF141820 - 0.15 11.7 0.1 2.3 7.9 0.0 2.2 2 0 0 2 2 2 0 Elongation factor SelB, winged helix NTP_transf_3 PF12804.7 ORF137630 - 0.063 13.6 0.0 0.091 13.1 0.0 1.4 1 1 0 1 1 1 0 MobA-like NTP transferase domain YhhN PF07947.14 ORF136249 - 1.1e-41 142.5 22.3 1.4e-41 142.2 22.3 1.1 1 0 0 1 1 1 1 YhhN family Sh_2 PF17512.2 ORF135317 - 0.01 15.6 0.0 0.01 15.6 0.0 1.7 2 0 0 2 2 2 0 Metapneumovirus Small hydrophobic protein TPR_10 PF13374.6 ORF132032 - 3.2e-27 93.6 1.3 1.7e-09 37.3 0.0 3.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF132032 - 1.8e-20 73.0 1.9 9.4e-08 32.2 0.1 3.3 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF132032 - 6.2e-08 32.8 2.1 0.22 12.5 0.0 4.3 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF132032 - 9.9e-08 31.7 0.0 3e-07 30.1 0.0 1.6 1 1 1 2 2 2 1 MalT-like TPR region TPR_16 PF13432.6 ORF132032 - 2.4e-07 31.3 4.5 0.044 14.4 0.1 3.9 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF132032 - 1.8e-05 24.3 0.7 2.5 8.1 0.1 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_4 PF07721.14 ORF132032 - 0.00039 20.8 8.0 0.21 12.3 0.1 4.2 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF132032 - 0.0011 18.9 6.5 2.1 8.6 0.1 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF132032 - 0.014 15.4 0.1 59 4.0 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF132032 - 0.039 13.6 0.7 19 5.0 0.1 3.2 3 0 0 3 3 3 0 TPR repeat TPR_17 PF13431.6 ORF132032 - 0.072 13.5 0.2 22 5.7 0.0 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF132032 - 0.14 12.5 0.2 60 4.2 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF132032 - 0.22 12.1 8.3 0.35 11.4 0.1 3.5 2 2 2 4 4 4 0 Tetratricopeptide repeat Sugar_tr PF00083.24 ORF131709 - 3.4e-13 49.3 9.3 1.3e-12 47.4 9.3 2.4 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF131709 - 4.5e-09 35.7 6.6 6.5e-09 35.2 6.6 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Zip PF02535.22 ORF131709 - 0.011 15.0 0.1 0.011 15.0 0.1 2.4 2 1 1 3 3 3 0 ZIP Zinc transporter TRI12 PF06609.13 ORF131709 - 0.038 12.4 1.8 0.045 12.2 0.9 1.3 1 1 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) COX4_pro PF03626.14 ORF131709 - 0.37 11.2 7.7 0.23 11.9 5.2 1.9 1 1 1 2 2 2 0 Prokaryotic Cytochrome C oxidase subunit IV Aldose_epim PF01263.20 ORF130364 - 2.1e-39 135.6 0.0 2.4e-39 135.4 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase PAP_central PF04928.17 ORF130223 - 0.0098 14.9 0.0 0.012 14.6 0.0 1.1 1 0 0 1 1 1 1 Poly(A) polymerase central domain LETM1 PF07766.13 ORF130223 - 0.016 14.6 0.3 0.022 14.1 0.3 1.2 1 0 0 1 1 1 0 LETM1-like protein Inj_translocase PF16928.5 ORF130223 - 1.5 8.2 7.9 1.5 8.2 2.8 2.3 1 1 1 2 2 2 0 DNA/protein translocase of phage P22 injectosome Secretin_N_2 PF07655.13 ORF129416 - 1.4 9.5 14.9 6.2 7.4 7.0 2.2 2 0 0 2 2 2 0 Secretin N-terminal domain EB1 PF03271.17 ORF128544 - 3.9e-16 59.0 1.2 6.6e-16 58.3 1.2 1.4 1 0 0 1 1 1 1 EB1-like C-terminal motif Pellino PF04710.14 ORF127625 - 0.01 14.5 1.2 0.011 14.4 1.2 1.1 1 0 0 1 1 1 0 Pellino EF-hand_7 PF13499.6 ORF127625 - 0.011 16.2 1.1 0.15 12.5 1.1 2.6 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF127625 - 0.13 12.3 0.7 28 5.0 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain Sigma_reg_C PF13791.6 ORF127625 - 3 8.0 10.5 1.4 9.1 5.0 2.9 2 1 1 3 3 3 0 Sigma factor regulator C-terminal zf-RING_2 PF13639.6 ORF127068 - 1.7e-09 37.9 10.7 1.7e-09 37.9 10.7 2.3 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF127068 - 1.9e-07 31.0 6.4 1.9e-07 31.0 6.4 2.5 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF127068 - 8.3e-07 28.8 11.1 8.3e-07 28.8 11.1 2.9 2 1 1 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF127068 - 1.4e-05 24.8 7.6 1.4e-05 24.8 7.6 3.2 2 1 0 2 2 1 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF127068 - 0.00058 19.4 9.7 0.00058 19.4 9.7 2.5 2 1 0 2 2 1 1 Zinc-ribbon, C4HC2 type zf-UDP PF14569.6 ORF127068 - 0.00088 19.4 2.1 0.00088 19.4 2.1 1.9 2 0 0 2 2 1 1 Zinc-binding RING-finger zf-rbx1 PF12678.7 ORF127068 - 0.00098 19.4 11.8 0.00098 19.4 11.8 2.6 2 2 0 2 2 1 1 RING-H2 zinc finger domain FANCL_C PF11793.8 ORF127068 - 0.0015 18.6 8.2 0.0015 18.6 8.2 2.6 2 1 0 2 2 2 1 FANCL C-terminal domain zf-RING_5 PF14634.6 ORF127068 - 0.0026 17.7 10.8 0.0026 17.7 10.8 3.1 2 1 0 2 2 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF127068 - 0.0082 16.0 11.6 0.0082 16.0 11.6 3.0 2 2 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 ORF127068 - 0.0096 15.8 10.8 0.0096 15.8 10.8 2.5 2 1 0 2 2 1 1 PHD-finger zf-ANAPC11 PF12861.7 ORF127068 - 0.017 15.2 6.6 0.017 15.2 6.6 2.4 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger T4-gp15_tss PF16724.5 ORF126911 - 0.047 13.4 0.0 0.063 13.0 0.0 1.3 1 0 0 1 1 1 0 T4-like virus Myoviridae tail sheath stabiliser DUF2157 PF09925.9 ORF122768 - 0.01 15.7 0.1 0.48 10.2 0.1 2.3 1 1 0 1 1 1 1 Predicted membrane protein (DUF2157) Nodulin_late PF07127.11 ORF121891 - 0.1 13.0 0.6 0.21 12.0 0.6 1.5 1 0 0 1 1 1 0 Late nodulin protein PLDc_2 PF13091.6 ORF121235 - 1.9e-25 89.3 0.0 2.3e-25 89.0 0.0 1.1 1 0 0 1 1 1 1 PLD-like domain PLDc PF00614.22 ORF121235 - 0.076 13.2 0.1 0.17 12.1 0.1 1.5 1 0 0 1 1 1 0 Phospholipase D Active site motif Regulator_TrmB PF11495.8 ORF121235 - 0.078 12.2 0.0 0.093 11.9 0.0 1.2 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB PP_kinase_C PF13090.6 ORF121235 - 0.22 11.0 0.1 1.1 8.7 0.0 1.8 2 0 0 2 2 2 0 Polyphosphate kinase C-terminal domain 2 SRP_SPB PF02978.19 ORF120225 - 0.0037 17.9 0.4 0.0037 17.9 0.4 1.8 2 0 0 2 2 2 1 Signal peptide binding domain FliG_N PF14842.6 ORF120225 - 0.033 14.7 0.2 0.076 13.6 0.2 1.7 1 1 0 1 1 1 0 FliG N-terminal domain Desulfoferrodox PF01880.18 ORF11972 - 0.067 13.8 0.0 0.16 12.6 0.0 1.6 1 0 0 1 1 1 0 Desulfoferrodoxin DUF2757 PF10955.8 ORF11972 - 0.1 12.8 0.2 0.35 11.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2757) Stc1 PF12898.7 ORF119143 - 0.011 16.2 7.5 2 9.0 0.0 4.0 2 2 1 3 3 3 0 Stc1 domain DUF5554 PF17709.1 ORF119143 - 0.45 10.7 9.8 0.35 11.0 2.4 2.8 2 2 0 2 2 2 0 Family of unknown function (DUF5554) OxoDH_E1alpha_N PF12573.8 ORF119003 - 0.21 11.4 1.5 4.5 7.1 0.3 2.3 2 0 0 2 2 2 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal MAPEG PF01124.18 ORF118367 - 1.7e-13 50.6 0.9 3.1e-13 49.7 0.9 1.4 1 1 0 1 1 1 1 MAPEG family Adeno_52K PF03052.15 ORF118367 - 0.039 13.4 0.1 0.071 12.5 0.1 1.4 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa Metallophos_2 PF12850.7 ORF117132 - 1.6e-18 67.4 0.0 2e-18 67.1 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 ORF117132 - 0.027 15.0 0.0 0.045 14.2 0.0 1.4 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase PC_rep PF01851.22 ORF117132 - 0.1 13.1 0.0 0.27 11.8 0.0 1.7 1 0 0 1 1 1 0 Proteasome/cyclosome repeat Phage_TAC_11 PF11836.8 ORF116704 - 0.053 13.6 0.5 0.094 12.8 0.5 1.5 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 HR1 PF02185.16 ORF116433 - 0.063 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Hr1 repeat Ras PF00071.22 ORF115587 - 5.2e-53 179.0 0.3 6.3e-53 178.7 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF115587 - 4.7e-33 114.0 0.1 8.5e-33 113.1 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF115587 - 1.2e-14 54.1 0.0 1.5e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF115587 - 8.4e-08 32.3 0.0 1.6e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF115587 - 3.6e-07 29.9 0.5 1.4e-05 24.8 0.5 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF115587 - 7.1e-06 25.5 0.1 9e-06 25.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF115587 - 0.00012 21.6 0.8 0.0048 16.3 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit DUF4471 PF14740.6 ORF115587 - 0.00074 18.8 0.1 0.00089 18.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4471) RsgA_GTPase PF03193.16 ORF115587 - 0.00083 19.3 0.4 0.013 15.4 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 ORF115587 - 0.0011 18.8 0.4 0.0091 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF115587 - 0.0015 19.0 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF115587 - 0.0019 18.5 0.1 0.0038 17.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 ORF115587 - 0.0027 17.5 0.3 0.097 12.4 0.0 2.0 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein AAA_32 PF13654.6 ORF115587 - 0.0058 15.5 0.2 0.59 8.9 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF115587 - 0.0063 16.0 1.0 0.014 14.9 0.1 1.9 2 0 0 2 2 2 1 P-loop containing dynein motor region cobW PF02492.19 ORF115587 - 0.0067 16.0 0.0 0.016 14.8 0.0 1.5 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 ORF115587 - 0.0071 16.1 0.2 0.014 15.1 0.2 1.6 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation NACHT PF05729.12 ORF115587 - 0.011 15.6 0.1 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 ORF115587 - 0.018 14.7 0.0 0.034 13.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Septin PF00735.18 ORF115587 - 0.02 14.2 0.1 0.04 13.2 0.1 1.5 1 0 0 1 1 1 0 Septin TniB PF05621.11 ORF115587 - 0.029 13.8 0.1 0.061 12.7 0.1 1.5 1 0 0 1 1 1 0 Bacterial TniB protein ABC_tran PF00005.27 ORF115587 - 0.035 14.6 2.9 0.18 12.3 2.9 2.0 1 1 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 ORF115587 - 0.11 12.6 0.2 0.34 10.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF115587 - 0.11 12.3 0.7 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Totivirus_coat PF05518.11 ORF113595 - 6.8 4.6 8.7 8.2 4.3 8.7 1.1 1 0 0 1 1 1 0 Totivirus coat protein PPR_2 PF13041.6 ORF113067 - 1.6e-28 98.6 0.2 5.9e-14 52.0 0.0 3.7 2 1 1 3 3 3 3 PPR repeat family PPR_1 PF12854.7 ORF113067 - 9.4e-19 66.8 0.0 5e-05 22.9 0.0 4.2 4 0 0 4 4 4 3 PPR repeat PPR PF01535.20 ORF113067 - 6.5e-18 63.7 0.4 0.00011 22.2 0.0 5.4 6 0 0 6 6 6 4 PPR repeat PPR_3 PF13812.6 ORF113067 - 2.4e-17 62.7 0.4 1.1e-12 47.9 0.1 3.3 2 1 1 3 3 3 3 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF113067 - 2.9e-07 30.1 4.5 1.2e-05 24.8 0.2 2.2 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP HrpB1_HrpK PF09613.10 ORF113067 - 0.0067 16.1 0.4 0.018 14.7 0.0 1.9 2 0 0 2 2 2 1 Bacterial type III secretion protein (HrpB1_HrpK) ERAP1_C PF11838.8 ORF113067 - 0.033 13.7 0.4 0.052 13.1 0.4 1.3 1 1 0 1 1 1 0 ERAP1-like C-terminal domain ELYS PF13934.6 ORF113067 - 0.046 13.7 1.2 0.083 12.9 0.1 1.7 1 1 1 2 2 2 0 Nuclear pore complex assembly ExbD PF02472.16 ORF113067 - 0.08 13.1 0.4 0.66 10.2 0.1 2.2 2 0 0 2 2 2 0 Biopolymer transport protein ExbD/TolR P16-Arc PF04699.14 ORF113067 - 0.12 12.8 1.6 0.22 12.0 0.3 1.9 2 0 0 2 2 2 0 ARP2/3 complex 16 kDa subunit (p16-Arc) PMP1_2 PF08114.11 ORF110167 - 0.084 12.6 0.2 0.17 11.6 0.2 1.5 1 0 0 1 1 1 0 ATPase proteolipid family Orthoreo_P17 PF07272.11 ORF109119 - 0.025 14.6 1.4 0.25 11.3 0.2 2.3 2 0 0 2 2 2 0 Orthoreovirus P17 protein DUF2673 PF10880.8 ORF109119 - 1.1 9.5 5.1 18 5.6 0.7 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2673) Microcephalin PF12258.8 ORF109119 - 2.3 7.3 9.4 7.7 5.6 0.5 2.2 1 1 0 2 2 2 0 Microcephalin protein Pentapeptide PF00805.22 ORF105665 - 0.2 11.3 2.8 5.9 6.6 0.0 2.4 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) Sec2p PF06428.11 ORF104789 - 0.049 13.6 0.6 0.049 13.6 0.6 3.1 2 1 0 2 2 2 0 GDP/GTP exchange factor Sec2p MitMem_reg PF13012.6 ORF104789 - 0.067 13.6 2.4 0.14 12.6 2.1 1.8 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function Spc7 PF08317.11 ORF104789 - 0.12 11.2 21.0 0.034 13.0 14.1 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Sugarporin_N PF11471.8 ORF104789 - 0.24 11.4 3.9 13 5.9 1.1 2.5 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension LsmAD PF06741.13 ORF104789 - 0.94 10.1 7.6 12 6.6 3.0 2.4 2 0 0 2 2 2 0 LsmAD domain HAP1_N PF04849.13 ORF104789 - 1.4 8.1 23.3 2.4 7.3 1.0 2.0 1 1 1 2 2 2 0 HAP1 N-terminal conserved region GP41 PF00517.17 ORF104789 - 2.7 7.9 5.8 3.9 7.3 0.6 2.3 1 1 1 2 2 2 0 Retroviral envelope protein TMF_DNA_bd PF12329.8 ORF104789 - 2.8 8.0 29.8 1.4 8.9 7.2 3.2 1 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding BLOC1_2 PF10046.9 ORF104789 - 2.8 8.3 12.2 1.7 9.0 1.6 2.9 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DivIVA PF05103.13 ORF104789 - 7.6 6.6 15.1 5.5 7.1 0.4 3.1 2 1 0 2 2 2 0 DivIVA protein Csm1_N PF18504.1 ORF104789 - 7.9 6.9 21.0 1.2 9.5 1.8 3.1 2 1 1 3 3 3 0 Csm1 N-terminal domain ADIP PF11559.8 ORF104789 - 8.1 6.5 21.3 0.91 9.6 3.7 3.0 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding Prominin PF05478.11 ORF104789 - 8.5 4.2 9.9 15 3.3 9.8 1.3 1 1 0 1 1 1 0 Prominin DUF1661 PF07877.11 ORF102947 - 0.011 15.4 0.1 0.16 11.7 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1661) PmbA_TldD PF01523.16 ORF10260 - 2.3e-23 83.5 0.0 3.1e-23 83.0 0.0 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase DUF4633 PF15464.6 ORF10180 - 0.48 10.6 6.4 0.92 9.7 6.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4633) FtsJ PF01728.19 ORF100092 - 9.4e-59 198.5 0.0 1.2e-58 198.2 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_25 PF13649.6 ORF100092 - 0.018 15.7 1.3 0.97 10.2 0.5 3.1 2 1 1 3 3 3 0 Methyltransferase domain Reovirus_L2 PF06016.11 ORF100092 - 0.059 10.6 0.0 0.068 10.4 0.0 1.0 1 0 0 1 1 1 0 Reovirus core-spike protein lambda-2 (L2) Methyltransf_31 PF13847.6 ORF100092 - 0.15 11.9 0.0 12 5.7 0.0 2.3 1 1 1 2 2 2 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 ORF100092 - 0.17 11.5 0.0 0.37 10.4 0.0 1.5 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F CTV_P6 PF06706.11 NODE_34771_length_622_cov_2.948893_g27813_i0forward_frame_1 - 0.11 12.2 0.3 0.26 11.0 0.3 1.5 1 0 0 1 1 1 0 Citrus tristeza virus 6-kDa protein TMEM141 PF15110.6 NODE_34742_length_622_cov_148.768313_g27785_i0forward_frame_1 - 0.49 11.0 4.3 0.32 11.6 0.7 2.4 1 1 2 3 3 3 0 TMEM141 protein family Peptidase_C2 PF00648.21 NODE_34719_length_623_cov_2.671769_g27764_i0reverse_frame_1 - 3.2e-19 69.1 0.0 1.4e-18 67.0 0.0 1.8 1 1 0 1 1 1 1 Calpain family cysteine protease ADK_lid PF05191.14 NODE_34715_length_623_cov_18.068027_g27760_i0forward_frame_1 - 0.96 9.5 4.0 1.2 9.2 0.7 2.5 2 0 0 2 2 2 0 Adenylate kinase, active site lid CysG_dimeriser PF10414.9 NODE_34703_length_623_cov_107.202381_g27748_i0reverse_frame_1 - 0.03 14.0 0.3 0.14 11.9 0.1 2.2 2 0 0 2 2 2 0 Sirohaem synthase dimerisation region HTH_31 PF13560.6 NODE_34690_length_623_cov_154.739796_g27737_i0reverse_frame_1 - 4.4 7.7 7.6 26 5.3 0.1 3.1 2 1 1 3 3 3 0 Helix-turn-helix domain TDRP PF15683.5 NODE_34686_length_623_cov_184.593537_g27733_i0forward_frame_1 - 0.008 16.2 4.1 0.008 16.2 4.1 1.9 2 0 0 2 2 2 1 Testis development-related protein Comm PF15957.5 NODE_34684_length_623_cov_228.049320_g27731_i0forward_frame_1 - 0.13 12.7 1.7 0.18 12.1 1.7 1.3 1 0 0 1 1 1 0 Commissureless Usher PF00577.20 NODE_34671_length_624_cov_2.212224_g27722_i0forward_frame_1 - 1.7e-60 205.5 8.8 1.9e-60 205.3 8.8 1.0 1 0 0 1 1 1 1 Outer membrane usher protein DUF4888 PF16229.5 NODE_34671_length_624_cov_2.212224_g27722_i0forward_frame_1 - 0.00065 19.7 0.8 0.00094 19.2 0.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4888) OEP PF02321.18 NODE_34671_length_624_cov_2.212224_g27722_i0forward_frame_1 - 0.0043 16.9 4.1 0.14 11.9 0.2 2.5 2 1 0 2 2 2 2 Outer membrane efflux protein DUF2688 PF10892.8 NODE_34669_length_624_cov_2.938879_g27720_i0reverse_frame_1 - 0.48 9.9 5.4 1.2 8.7 1.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) DUF5535 PF17687.1 NODE_34664_length_624_cov_66.314092_g27716_i0reverse_frame_1 - 0.22 11.7 1.2 0.37 11.0 1.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5535) Spo7 PF03907.13 NODE_34618_length_625_cov_3.098305_g27672_i0reverse_frame_3 - 0.61 9.5 8.3 3.8 6.9 2.8 2.3 1 1 1 2 2 2 0 Spo7-like protein NmrA PF05368.13 NODE_34618_length_625_cov_3.098305_g27672_i0reverse_frame_2 - 3.3e-05 23.5 0.0 4.2e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 NODE_34618_length_625_cov_3.098305_g27672_i0reverse_frame_2 - 0.00037 20.5 0.0 0.00046 20.1 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding DapB_N PF01113.20 NODE_34618_length_625_cov_3.098305_g27672_i0reverse_frame_2 - 0.16 12.1 0.1 0.24 11.5 0.1 1.2 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus POLO_box PF00659.18 NODE_34614_length_625_cov_57.735593_g27668_i0reverse_frame_3 - 1e-12 48.0 1.5 1.2e-12 47.9 0.5 1.6 2 0 0 2 2 2 1 POLO box duplicated region T4-Gluco-transf PF09198.10 NODE_34614_length_625_cov_57.735593_g27668_i0forward_frame_3 - 0.29 10.8 0.2 0.29 10.8 0.2 2.1 2 0 0 2 2 2 0 Bacteriophage T4 beta-glucosyltransferase Hepatitis_core PF00906.20 NODE_34613_length_625_cov_75.179661_g27667_i0reverse_frame_3 - 7.3 6.1 14.5 15 5.1 14.4 1.5 1 1 0 1 1 1 0 Hepatitis core antigen PsaM PF07465.13 NODE_34613_length_625_cov_75.179661_g27667_i0forward_frame_3 - 0.011 15.5 0.1 0.018 14.8 0.1 1.4 1 0 0 1 1 1 0 Photosystem I protein M (PsaM) Sugar_tr PF00083.24 NODE_34613_length_625_cov_75.179661_g27667_i0forward_frame_2 - 5.2e-30 104.7 10.0 6.9e-30 104.3 10.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_34613_length_625_cov_75.179661_g27667_i0forward_frame_2 - 1.4e-06 27.5 5.8 1.6e-06 27.3 5.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Rcd1 PF04078.13 NODE_34603_length_625_cov_123.325424_g27657_i0reverse_frame_2 - 7.2e-28 97.6 0.1 1e-27 97.1 0.1 1.2 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like Topo_Zn_Ribbon PF08272.11 NODE_34603_length_625_cov_123.325424_g27657_i0reverse_frame_2 - 1.3 8.7 4.8 1.2 8.9 0.1 2.7 3 0 0 3 3 3 0 Topoisomerase I zinc-ribbon-like Chordopox_RPO7 PF05864.12 NODE_34603_length_625_cov_123.325424_g27657_i0forward_frame_2 - 0.12 12.6 1.9 0.17 12.2 0.0 2.2 2 1 1 3 3 3 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) LAP1C PF05609.12 NODE_34602_length_625_cov_123.347458_g27656_i0reverse_frame_2 - 0.86 8.6 21.5 0.98 8.4 21.5 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) BID PF06393.11 NODE_34596_length_625_cov_146.447458_g27650_i0forward_frame_2 - 0.016 14.7 0.0 0.023 14.2 0.0 1.2 1 0 0 1 1 1 0 BH3 interacting domain (BID) SUKH-3 PF14433.6 NODE_34572_length_626_cov_1.884941_g27633_i0reverse_frame_3 - 0.079 13.4 0.0 0.14 12.6 0.0 1.5 2 0 0 2 2 2 0 SUKH-3 immunity protein amfpi-1 PF12190.8 NODE_34572_length_626_cov_1.884941_g27633_i0reverse_frame_2 - 0.37 11.4 4.7 1.8 9.2 4.7 2.1 1 1 0 1 1 1 0 Fungal protease inhibitor GAS PF13851.6 NODE_34569_length_626_cov_1.935702_g27630_i0forward_frame_2 - 0.0028 17.0 3.0 0.0028 17.0 3.0 2.0 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding Phage_Mu_Gam PF07352.12 NODE_34569_length_626_cov_1.935702_g27630_i0forward_frame_2 - 1.9 8.4 10.5 0.05 13.5 2.2 2.3 3 0 0 3 3 3 0 Bacteriophage Mu Gam like protein Laminin_II PF06009.12 NODE_34569_length_626_cov_1.935702_g27630_i0forward_frame_2 - 2.2 8.3 9.8 1 9.4 0.6 2.9 1 1 2 3 3 3 0 Laminin Domain II DUF3336 PF11815.8 NODE_34569_length_626_cov_1.935702_g27630_i0forward_frame_2 - 8.6 6.1 11.6 43 3.8 11.6 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3336) Peptidase_M16 PF00675.20 NODE_34565_length_626_cov_3.106599_g27626_i0reverse_frame_3 - 0.021 14.8 1.3 0.045 13.7 1.1 1.7 1 1 0 1 1 1 0 Insulinase (Peptidase family M16) CPSase_L_D2 PF02786.17 NODE_34565_length_626_cov_3.106599_g27626_i0reverse_frame_3 - 0.036 13.6 1.0 0.052 13.0 1.0 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain 2-Hacid_dh_C PF02826.19 NODE_34563_length_626_cov_3.495770_g27624_i1reverse_frame_2 - 2.5e-08 33.5 0.0 8.8e-08 31.7 0.0 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF551 PF04448.12 NODE_34563_length_626_cov_3.495770_g27624_i1reverse_frame_2 - 0.068 14.1 1.5 0.18 12.8 0.6 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF551) NAD_binding_2 PF03446.15 NODE_34563_length_626_cov_3.495770_g27624_i1reverse_frame_2 - 0.08 13.1 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Fijivirus_P9-2 PF06837.11 NODE_34562_length_626_cov_3.560068_g27624_i0forward_frame_3 - 3.9 6.9 8.2 24 4.3 0.1 2.1 1 1 1 2 2 2 0 Fijivirus P9-2 protein 2-Hacid_dh_C PF02826.19 NODE_34562_length_626_cov_3.560068_g27624_i0forward_frame_2 - 2.5e-08 33.5 0.0 8.8e-08 31.7 0.0 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF551 PF04448.12 NODE_34562_length_626_cov_3.560068_g27624_i0forward_frame_2 - 0.038 14.9 0.6 0.18 12.8 0.6 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF551) NAD_binding_2 PF03446.15 NODE_34562_length_626_cov_3.560068_g27624_i0forward_frame_2 - 0.079 13.1 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase GlyL_C PF12524.8 NODE_34554_length_626_cov_43.830795_g27617_i0forward_frame_3 - 0.12 12.5 0.3 0.23 11.6 0.3 1.4 1 0 0 1 1 1 0 dsDNA virus glycoprotein L C terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks110.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks110.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks110.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks110.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 17:58:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MHC_I_2 PF14586.6 NODE_34534_length_626_cov_204.539763_g27598_i0reverse_frame_3 - 0.23 11.3 2.0 0.91 9.4 1.5 2.2 1 1 0 1 1 1 0 Class I Histocompatibility antigen, NKG2D ligand, domains 1 and 2 Herpes_PAP PF03325.13 NODE_34522_length_626_cov_686.566836_g12383_i2forward_frame_2 - 0.063 12.9 0.5 0.11 12.1 0.5 1.4 1 0 0 1 1 1 0 Herpesvirus polymerase accessory protein Peptidase_S66 PF02016.15 NODE_34517_length_627_cov_2.244932_g27583_i0forward_frame_2 - 9.9e-20 70.9 0.0 1.2e-19 70.5 0.0 1.1 1 0 0 1 1 1 1 LD-carboxypeptidase N-terminal domain OEP PF02321.18 NODE_34512_length_627_cov_3.521959_g27578_i0forward_frame_3 - 2.2e-20 73.3 11.9 2.8e-20 72.9 11.9 1.1 1 0 0 1 1 1 1 Outer membrane efflux protein HigB-like_toxin PF05015.13 NODE_34512_length_627_cov_3.521959_g27578_i0forward_frame_3 - 0.048 14.1 0.0 0.2 12.1 0.0 1.9 1 1 1 2 2 2 0 RelE-like toxin of type II toxin-antitoxin system HigB BRX_assoc PF16627.5 NODE_34512_length_627_cov_3.521959_g27578_i0forward_frame_3 - 0.11 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Unstructured region between BRX_N and BRX domain Calici_coat PF00915.20 NODE_34509_length_627_cov_83.665541_g27575_i0reverse_frame_2 - 0.12 11.3 0.2 0.15 10.9 0.2 1.1 1 0 0 1 1 1 0 Calicivirus coat protein Glyco_transf_34 PF05637.12 NODE_34509_length_627_cov_83.665541_g27575_i0forward_frame_3 - 7.4e-08 32.4 0.0 1.1e-07 31.9 0.0 1.2 1 0 0 1 1 1 1 galactosyl transferase GMA12/MNN10 family DUF1137 PF06587.11 NODE_34504_length_627_cov_98.545608_g27570_i0reverse_frame_3 - 0.03 14.4 1.0 0.056 13.5 1.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1137) SRP14 PF02290.15 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_3 - 0.0006 20.1 1.1 0.0008 19.7 1.1 1.6 1 1 0 1 1 1 1 Signal recognition particle 14kD protein PBP1_TM PF14812.6 NODE_34497_length_627_cov_140.057432_g27563_i0forward_frame_3 - 0.00078 19.8 0.0 0.0013 19.1 0.0 1.3 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Hydrolase_6 PF13344.6 NODE_34495_length_627_cov_155.265203_g27561_i0forward_frame_3 - 0.00023 21.2 0.0 0.00037 20.6 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 NODE_34495_length_627_cov_155.265203_g27561_i0forward_frame_3 - 0.0066 16.2 0.0 0.0089 15.8 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NT5C PF06941.12 NODE_34495_length_627_cov_155.265203_g27561_i0forward_frame_3 - 0.18 11.7 0.0 0.3 10.9 0.0 1.4 1 1 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) DUF4381 PF14316.6 NODE_34486_length_627_cov_315.819257_g27553_i0forward_frame_2 - 0.19 12.0 0.0 0.26 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Use1 PF09753.9 ORF99287 - 6.6e-15 55.5 9.8 7.8e-15 55.3 9.8 1.1 1 0 0 1 1 1 1 Membrane fusion protein Use1 zf-CRD PF17979.1 ORF99287 - 0.048 13.8 1.2 0.065 13.3 0.4 1.5 1 1 1 2 2 2 0 Cysteine rich domain with multizinc binding regions DUF853 PF05872.12 ORF99287 - 0.28 9.7 3.8 0.35 9.4 3.8 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) 60KD_IMP PF02096.20 ORF99287 - 1.2 9.0 5.2 0.092 12.6 0.4 1.6 2 0 0 2 2 2 0 60Kd inner membrane protein DUF2207 PF09972.9 ORF99287 - 3.7 6.2 7.7 6.4 5.4 7.3 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Gypsy PF07253.11 ORF99273 - 0.049 12.2 0.0 0.064 11.8 0.0 1.1 1 0 0 1 1 1 0 Gypsy protein DUF3891 PF13030.6 ORF99273 - 0.099 12.4 0.0 0.19 11.4 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3891) BSP PF04450.12 ORF99273 - 0.1 12.4 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Peptidase of plants and bacteria Vitelline_membr PF10542.9 ORF96196 - 0.038 13.9 5.6 6.6 6.7 0.3 3.7 2 1 1 3 3 3 0 Vitelline membrane cysteine-rich region K_channel_TID PF07941.11 ORF95003 - 0.025 15.0 3.8 0.041 14.3 3.8 1.3 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain cNMP_binding PF00027.29 ORF92357 - 0.0001 22.3 0.1 0.00021 21.3 0.1 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain EF-hand_6 PF13405.6 ORF91919 - 1.6e-06 27.5 0.1 0.027 14.4 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF91919 - 0.00036 19.9 0.0 0.56 9.9 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF91919 - 0.0055 17.1 0.1 0.15 12.5 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF91919 - 0.061 12.8 0.1 4.5 6.9 0.0 2.3 2 0 0 2 2 2 0 EF hand EF-hand_8 PF13833.6 ORF91919 - 0.17 11.7 0.2 2.4 8.1 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain pair DUF3898 PF13037.6 ORF91391 - 0.11 12.6 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3898) GST_C_3 PF14497.6 ORF90923 - 1.9e-14 53.7 0.4 3.3e-14 52.9 0.4 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF90923 - 4.6e-12 46.1 0.1 9.4e-12 45.1 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF90923 - 2e-06 27.9 0.1 3.2e-06 27.3 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF90923 - 3.9e-05 24.0 0.1 0.00015 22.1 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF90923 - 0.0027 17.7 0.0 0.0049 16.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF90923 - 0.02 15.2 0.0 0.05 13.9 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain UPF0556 PF10572.9 ORF90923 - 0.1 12.1 0.1 0.16 11.4 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0556 CCDC53 PF10152.9 ORF90331 - 0.0035 17.8 8.8 0.0054 17.2 8.8 1.2 1 0 0 1 1 1 1 Subunit CCDC53 of WASH complex DUF641 PF04859.12 ORF90331 - 0.015 15.6 7.5 0.015 15.6 7.5 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Spectrin PF00435.21 ORF90331 - 0.14 12.6 11.5 1 9.9 6.0 2.5 1 1 1 2 2 2 0 Spectrin repeat Golgin_A5 PF09787.9 ORF90331 - 0.18 11.2 17.9 0.24 10.8 17.9 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 BRE1 PF08647.11 ORF90331 - 1.6 8.8 25.1 1.7 8.8 1.4 3.6 2 1 1 3 3 3 0 BRE1 E3 ubiquitin ligase ZYG-11_interact PF05884.12 ORF90331 - 2.3 7.5 3.5 3 7.2 3.5 1.1 1 0 0 1 1 1 0 Interactor of ZYG-11 GBP_C PF02841.14 ORF90331 - 3.5 7.0 21.7 0.92 8.8 18.5 1.8 1 1 1 2 2 2 0 Guanylate-binding protein, C-terminal domain FliJ PF02050.16 ORF90331 - 3.6 7.8 20.5 0.1 12.9 13.1 2.1 2 1 0 2 2 2 0 Flagellar FliJ protein Exonuc_VII_L PF02601.15 ORF90331 - 3.8 7.0 9.2 4.2 6.8 9.2 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Striatin PF08232.12 ORF90331 - 5 7.7 16.8 0.12 12.9 6.9 2.3 1 1 1 2 2 2 0 Striatin family Homeodomain PF00046.29 ORF88673 - 0.0093 15.8 0.6 0.018 14.9 0.6 1.5 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF88673 - 0.1 12.5 0.1 0.27 11.1 0.1 1.7 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT MFS_1 PF07690.16 ORF88608 - 0.00011 21.3 7.4 0.00015 20.8 7.4 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Dicer_dimer PF03368.14 ORF87166 - 0.027 14.6 0.0 0.1 12.8 0.0 1.9 2 0 0 2 2 2 0 Dicer dimerisation domain RRM_1 PF00076.22 ORF8525 - 4.6e-14 52.0 0.3 4.2e-06 26.5 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF8525 - 0.048 13.5 0.0 5.3 7.0 0.0 2.4 2 1 0 2 2 2 0 Occluded RNA-recognition motif CagA PF03507.13 ORF8525 - 0.056 13.4 0.1 0.086 12.8 0.1 1.2 1 0 0 1 1 1 0 CagA exotoxin RRM_1 PF00076.22 ORF852 - 6.7e-22 77.1 1.0 2.4e-11 43.3 0.0 2.5 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF852 - 5.8e-06 26.1 0.1 0.00035 20.4 0.0 2.5 2 0 0 2 2 2 1 Occluded RNA-recognition motif RRM_5 PF13893.6 ORF852 - 6.9e-05 22.4 3.1 0.0005 19.7 1.2 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Calcipressin PF04847.12 ORF852 - 0.0077 16.0 2.0 0.15 11.8 0.2 2.5 2 1 0 2 2 2 1 Calcipressin AAA_11 PF13086.6 ORF852 - 0.012 15.4 2.7 0.014 15.2 2.7 1.1 1 0 0 1 1 1 0 AAA domain UPF0242 PF06785.11 ORF852 - 0.014 15.5 7.0 0.019 15.1 7.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HMA PF00403.26 ORF852 - 0.017 15.6 0.1 0.086 13.3 0.0 2.1 2 0 0 2 2 2 0 Heavy-metal-associated domain SKA2 PF16740.5 ORF852 - 0.035 13.9 5.9 0.031 14.0 4.3 1.7 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Img2 PF05046.14 ORF852 - 0.049 13.9 0.1 0.11 12.8 0.1 1.8 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Limkain-b1 PF11608.8 ORF852 - 0.088 12.9 1.3 1.1 9.4 0.1 2.9 2 1 1 3 3 3 0 Limkain b1 Seryl_tRNA_N PF02403.22 ORF852 - 0.094 13.0 7.6 0.17 12.1 7.6 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF4522 PF15022.6 ORF852 - 0.22 11.8 3.1 0.33 11.2 2.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4522) CCDC-167 PF15188.6 ORF852 - 0.24 11.8 5.8 0.47 10.8 5.8 1.5 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 LMBR1 PF04791.16 ORF852 - 0.37 9.6 2.1 0.39 9.6 2.1 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein MRP-S26 PF14943.6 ORF852 - 0.56 10.1 13.0 0.83 9.5 13.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 FliD_N PF02465.18 ORF852 - 0.77 10.5 3.9 0.52 11.0 1.0 2.0 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Microvir_lysis PF04517.12 ORF82150 - 0.061 13.2 0.1 1.7 8.6 0.0 2.4 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus Xrn1_D3 PF18194.1 ORF82139 - 0.087 12.9 0.8 0.18 11.9 0.1 1.9 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 Nmad5 PF18757.1 ORF82139 - 0.11 12.7 3.3 0.15 12.2 3.3 1.2 1 0 0 1 1 1 0 Nucleotide modification associated domain 5 Receptor_2B4 PF11465.8 ORF80673 - 0.17 12.1 3.0 0.35 11.1 2.7 1.6 1 1 0 1 1 1 0 Natural killer cell receptor 2B4 YabA PF06156.13 ORF80673 - 1.3 9.7 6.4 1.7 9.4 5.4 1.8 1 1 1 2 2 2 0 Initiation control protein YabA Erythro-docking PF09277.11 ORF78695 - 0.009 15.9 0.1 0.017 15.0 0.1 1.4 1 0 0 1 1 1 1 Erythronolide synthase, docking Glyco_hydro_36N PF16875.5 ORF78366 - 0.024 14.2 0.1 0.035 13.7 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 36 N-terminal domain Chromate_transp PF02417.15 ORF77084 - 1.6e-25 90.1 15.8 1.6e-25 90.1 15.8 1.3 2 0 0 2 2 2 1 Chromate transporter Mob1_phocein PF03637.17 ORF74562 - 2.9e-31 108.8 2.4 3.9e-31 108.4 2.4 1.1 1 0 0 1 1 1 1 Mob1/phocein family FMN_red PF03358.15 ORF74354 - 4.6e-15 55.7 0.0 6.2e-15 55.3 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase DUF4231 PF14015.6 ORF73453 - 0.041 14.3 1.4 0.076 13.5 1.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) DUF1129 PF06570.11 ORF73453 - 0.058 12.9 7.6 0.079 12.4 7.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3784 PF12650.7 ORF73453 - 1.7 8.9 12.1 1.2 9.3 8.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3784) Topoisom_bac PF01131.20 ORF72611 - 7.2e-10 38.4 4.2 4.1e-09 35.9 0.0 2.0 2 0 0 2 2 2 2 DNA topoisomerase DUF4798 PF16055.5 ORF72611 - 0.11 12.8 4.0 0.14 12.4 2.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4798) DUF1631 PF07793.11 ORF72611 - 0.98 7.8 3.0 6 5.2 3.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1631) WD40 PF00400.32 ORF71205 - 0.027 15.3 1.8 9.2 7.3 0.1 3.5 4 0 0 4 4 4 0 WD domain, G-beta repeat HA PF03457.14 ORF70471 - 2.6e-22 78.9 5.9 2.2e-11 43.9 0.3 2.2 2 0 0 2 2 2 2 Helicase associated domain Topoisom_bac PF01131.20 ORF68284 - 7.2e-10 38.4 4.2 4.1e-09 35.9 0.0 2.0 2 0 0 2 2 2 2 DNA topoisomerase DUF4798 PF16055.5 ORF68284 - 0.11 12.8 4.0 0.14 12.4 2.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4798) DUF1631 PF07793.11 ORF68284 - 0.98 7.8 3.0 6 5.2 3.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1631) GST_N PF02798.20 ORF65533 - 3.4e-13 49.7 0.0 5.6e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF65533 - 1.3e-12 47.9 0.0 2.3e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF65533 - 7.2e-12 45.4 0.0 3.7e-11 43.1 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF65533 - 9.5e-10 38.4 0.3 1.9e-09 37.4 0.3 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF65533 - 1.1e-09 38.4 0.0 2e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_5 PF16865.5 ORF65533 - 0.00058 20.4 0.0 0.00087 19.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF65533 - 0.0016 18.6 0.0 0.0035 17.5 0.0 1.5 1 1 1 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF65533 - 0.026 15.2 0.0 0.046 14.5 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain Saccharop_dh_N PF04455.12 ORF64304 - 0.002 18.5 0.3 0.12 12.8 0.1 2.4 2 0 0 2 2 2 1 LOR/SDH bifunctional enzyme conserved region DUF1043 PF06295.12 ORF64304 - 0.014 15.4 2.1 0.014 15.4 2.1 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1043) DUF3450 PF11932.8 ORF64304 - 0.015 14.6 1.8 0.022 14.0 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Lebercilin PF15619.6 ORF64304 - 0.027 14.1 11.8 0.11 12.2 11.8 2.0 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease TMPIT PF07851.13 ORF64304 - 0.067 12.4 5.0 0.11 11.8 5.0 1.5 1 0 0 1 1 1 0 TMPIT-like protein Tup_N PF08581.10 ORF64304 - 0.068 13.5 5.3 0.22 11.8 5.3 1.8 1 1 0 1 1 1 0 Tup N-terminal DUF1664 PF07889.12 ORF64304 - 0.077 13.0 5.2 0.14 12.2 5.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF3552 PF12072.8 ORF64304 - 0.59 9.5 12.1 0.15 11.5 8.6 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) Atg14 PF10186.9 ORF64304 - 1.3 8.0 10.1 1.5 7.9 10.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YfhO PF09586.10 ORF64304 - 8.8 4.4 8.5 10 4.2 8.5 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF5082 PF16888.5 ORF64285 - 0.016 15.4 3.0 0.12 12.6 2.6 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Cyc-maltodext_C PF10438.9 ORF64285 - 0.024 14.7 0.2 0.051 13.7 0.2 1.5 1 0 0 1 1 1 0 Cyclo-malto-dextrinase C-terminal domain Spot_14 PF07084.12 ORF64285 - 0.046 13.9 3.9 0.14 12.3 3.9 1.8 1 1 0 1 1 1 0 Thyroid hormone-inducible hepatic protein Spot 14 TFIIA_gamma_N PF02268.16 ORF64285 - 0.064 13.3 0.1 0.83 9.7 0.0 2.4 2 0 0 2 2 2 0 Transcription initiation factor IIA, gamma subunit, helical domain DUF4795 PF16043.5 ORF64285 - 0.064 12.8 12.5 0.34 10.5 12.5 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) ApoLp-III PF07464.11 ORF64285 - 0.15 12.1 7.1 2.2 8.4 1.9 2.2 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) PPR_2 PF13041.6 ORF63665 - 2.7e-20 72.3 0.0 4.8e-09 36.3 0.0 3.9 1 1 4 5 5 5 5 PPR repeat family PPR PF01535.20 ORF63665 - 4.4e-19 67.3 0.0 0.00015 21.8 0.1 4.6 4 0 0 4 4 4 4 PPR repeat PPR_1 PF12854.7 ORF63665 - 5.8e-11 41.9 0.0 0.02 14.6 0.0 4.8 5 0 0 5 5 5 3 PPR repeat PPR_3 PF13812.6 ORF63665 - 1.5e-10 41.0 0.0 7.2e-06 26.0 0.0 3.3 2 1 0 3 3 3 2 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF63665 - 0.00012 21.5 0.0 0.0018 17.7 0.0 2.0 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP TPR_7 PF13176.6 ORF63665 - 0.0011 18.9 0.1 18 5.6 0.0 4.8 3 1 2 5 5 5 1 Tetratricopeptide repeat Mannosyl_trans4 PF15971.5 ORF63665 - 0.52 10.1 2.6 1.5 8.7 0.6 2.2 2 0 0 2 2 2 0 DolP-mannose mannosyltransferase zf-LITAF-like PF10601.9 ORF63356 - 8.5e-13 48.4 15.9 1.1e-12 48.0 15.9 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain CYSTM PF12734.7 ORF63356 - 0.04 14.2 6.5 0.04 14.2 6.5 2.7 2 1 0 2 2 2 0 Cysteine-rich TM module stress tolerance Nop10p PF04135.12 ORF63356 - 0.17 12.0 5.2 0.31 11.1 1.3 2.5 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family p450 PF00067.22 ORF62637 - 2.4e-39 135.4 0.0 2.8e-39 135.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Attractin PF08037.11 ORF62637 - 0.026 14.5 0.2 0.07 13.1 0.2 1.6 1 0 0 1 1 1 0 Attractin family HTH_39 PF14090.6 ORF62637 - 0.029 14.1 0.0 0.56 10.0 0.0 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain DDE_Tnp_IS66_C PF13817.6 ORF62637 - 0.048 13.9 0.1 0.14 12.4 0.1 1.8 1 0 0 1 1 1 0 IS66 C-terminal element LysR_substrate PF03466.20 ORF62248 - 1.1e-14 54.3 0.0 3.8e-14 52.5 0.0 1.7 1 1 0 1 1 1 1 LysR substrate binding domain HMW1C_N PF18071.1 ORF61090 - 0.045 13.6 0.3 0.08 12.7 0.3 1.3 1 0 0 1 1 1 0 HMW1C N-terminal Helicase_C PF00271.31 ORF56961 - 8.5e-29 100.1 0.0 1.4e-28 99.5 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain GST_C_3 PF14497.6 ORF53324 - 2.9e-13 49.8 0.3 4.5e-13 49.2 0.3 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF53324 - 1.8e-08 34.6 0.0 3.4e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF53324 - 1.9e-07 31.2 0.1 3.2e-07 30.5 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF53324 - 0.0041 17.1 0.0 0.0077 16.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain CnrY PF17524.2 ORF52810 - 0.016 15.4 0.2 0.033 14.4 0.2 1.6 1 0 0 1 1 1 0 Anti-sigma factor CnrY zf-HC2 PF13490.6 ORF52810 - 0.19 12.0 1.9 0.43 10.9 1.9 1.6 1 0 0 1 1 1 0 Putative zinc-finger Proteasome PF00227.26 ORF51531 - 7.4e-43 146.3 0.2 8.4e-43 146.1 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit DUF2459 PF09601.10 ORF50810 - 3.4e-46 157.2 0.0 3.9e-46 157.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2459) PhnA_Zn_Ribbon PF08274.12 ORF50346 - 1.1 9.3 10.2 0.56 10.2 1.8 2.7 2 0 0 2 2 2 0 PhnA Zinc-Ribbon CAP_N PF01213.19 ORF50346 - 3.6 7.0 10.4 3.2 7.2 9.7 1.4 1 1 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal HRM PF02793.22 ORF48773 - 1.2 9.5 9.1 0.22 11.9 2.0 2.8 2 2 0 2 2 2 0 Hormone receptor domain DUF1065 PF06358.11 ORF44326 - 0.14 12.1 0.1 0.26 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1065) Synapsin_N PF10581.9 ORF4398 - 0.05 13.6 0.0 0.099 12.6 0.0 1.5 1 0 0 1 1 1 0 Synapsin N-terminal DUF4291 PF14124.6 ORF42582 - 1.6e-45 155.2 0.7 3.8e-44 150.7 0.7 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4291) Suf PF05843.14 ORF42082 - 0.019 15.0 5.9 0.023 14.7 5.9 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) DUF3364 PF11844.8 ORF42082 - 0.76 10.1 6.1 1.8 8.8 1.4 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3364) DUF3791 PF12668.7 ORF3928 - 0.096 12.8 0.4 0.21 11.7 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3791) RCC1_2 PF13540.6 ORF38696 - 1.2e-09 37.7 4.8 0.16 11.8 0.0 5.2 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat AFP_2 PF18815.1 ORF38696 - 1.1e-05 25.6 6.4 1.9 8.8 0.1 4.5 2 1 2 4 4 4 3 Bacterial antifreeze protein repeat Crystall PF00030.19 ORF38696 - 1.6e-05 25.0 0.0 0.18 12.0 0.0 3.2 3 0 0 3 3 3 2 Beta/Gamma crystallin DUF155 PF02582.14 ORF38696 - 0.00078 19.6 1.7 5 7.2 0.0 4.1 1 1 1 2 2 2 1 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 ORF38696 - 0.0011 19.4 0.0 36 4.9 0.0 4.0 4 0 0 4 4 4 0 Spectrin repeat Methyltransf_29 PF03141.16 ORF38696 - 0.061 11.9 0.5 20 3.5 0.0 3.6 4 0 0 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase SSrecog PF03531.14 ORF38696 - 0.12 12.3 0.3 45 4.1 0.0 3.3 4 0 0 4 4 4 0 Structure-specific recognition protein (SSRP1) Glyco_hydro_88 PF07470.13 ORF38696 - 0.21 10.6 1.9 9.8 5.1 0.0 3.6 3 1 1 4 4 4 0 Glycosyl Hydrolase Family 88 DDE_Tnp_1_3 PF13612.6 ORF38696 - 0.22 11.5 1.3 1.4e+02 2.4 0.0 3.7 4 0 0 4 4 4 0 Transposase DDE domain Apo-CIII PF05778.12 ORF38696 - 2.2 8.0 8.4 27 4.5 0.1 3.9 4 0 0 4 4 4 0 Apolipoprotein CIII (Apo-CIII) GlcNAc-1_reg PF18440.1 ORF35376 - 0.04 14.1 1.8 0.7 10.2 0.5 2.5 2 0 0 2 2 2 0 Putative GlcNAc-1 phosphotransferase regulatory domain Cys_rich_KTR PF14205.6 ORF35376 - 0.092 12.6 0.8 0.18 11.6 0.8 1.5 1 0 0 1 1 1 0 Cysteine-rich KTR MS_channel PF00924.18 ORF35376 - 0.17 11.4 0.6 0.21 11.1 0.6 1.2 1 0 0 1 1 1 0 Mechanosensitive ion channel zf-C5HC2 PF02928.16 ORF35376 - 1.6 9.2 5.8 0.37 11.2 2.5 1.7 2 0 0 2 2 2 0 C5HC2 zinc finger UPRTase PF14681.6 ORF33655 - 6.9e-65 218.4 0.0 7.8e-65 218.2 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 ORF33655 - 1.2e-12 47.7 0.3 2e-12 46.9 0.3 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 ORF33655 - 0.035 14.2 0.1 0.059 13.4 0.1 1.4 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain DUF3263 PF11662.8 ORF33655 - 0.19 11.6 0.1 0.37 10.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3263) PAN_3 PF08277.12 ORF3330 - 0.022 14.6 0.4 0.043 13.6 0.4 1.4 1 0 0 1 1 1 0 PAN-like domain DTW PF03942.15 ORF32080 - 5.8e-12 45.7 0.2 1.1e-11 44.8 0.2 1.4 1 0 0 1 1 1 1 DTW domain MCM_bind PF09739.9 ORF32080 - 6.3 5.1 8.4 7.5 4.9 8.4 1.1 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor RR_TM4-6 PF06459.12 ORF32080 - 9.6 5.9 14.3 13 5.5 14.3 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CheR PF01739.18 ORF31476 - 0.027 14.0 1.1 0.26 10.8 0.0 2.1 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain IMD PF08397.11 ORF31476 - 0.029 13.7 7.3 0.029 13.8 6.3 1.4 1 1 0 1 1 1 0 IRSp53/MIM homology domain DUF5601 PF18151.1 ORF31476 - 0.14 12.5 0.2 0.14 12.5 0.2 2.3 2 2 0 2 2 2 0 Domain of unknown function (DUF5601) DUF4061 PF13270.6 ORF31476 - 0.22 11.9 1.6 0.19 12.0 0.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4061) Saccharop_dh_N PF04455.12 ORF29851 - 0.002 18.5 0.3 0.12 12.8 0.1 2.4 2 0 0 2 2 2 1 LOR/SDH bifunctional enzyme conserved region DUF1043 PF06295.12 ORF29851 - 0.014 15.4 2.1 0.014 15.4 2.1 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1043) DUF3450 PF11932.8 ORF29851 - 0.015 14.6 1.8 0.022 14.0 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Lebercilin PF15619.6 ORF29851 - 0.027 14.1 11.8 0.11 12.2 11.8 2.0 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease TMPIT PF07851.13 ORF29851 - 0.067 12.4 5.0 0.11 11.8 5.0 1.5 1 0 0 1 1 1 0 TMPIT-like protein Tup_N PF08581.10 ORF29851 - 0.068 13.5 5.3 0.22 11.8 5.3 1.8 1 1 0 1 1 1 0 Tup N-terminal DUF1664 PF07889.12 ORF29851 - 0.077 13.0 5.2 0.14 12.2 5.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF3552 PF12072.8 ORF29851 - 0.59 9.5 12.1 0.15 11.5 8.6 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) Atg14 PF10186.9 ORF29851 - 1.3 8.0 10.1 1.5 7.9 10.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YfhO PF09586.10 ORF29851 - 8.8 4.4 8.5 10 4.2 8.5 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO EF-hand_7 PF13499.6 ORF28049 - 0.004 17.6 0.1 0.0096 16.4 0.1 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF28049 - 0.0075 16.1 0.5 0.24 11.3 0.0 2.3 2 0 0 2 2 2 1 EF-hand domain pair FKS1_dom1 PF14288.6 ORF27948 - 0.012 16.0 3.1 0.02 15.3 2.8 1.5 1 1 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 Ribosomal_L19e PF01280.20 ORF27808 - 1.6e-55 187.1 13.4 1.6e-55 187.1 13.4 2.2 2 0 0 2 2 2 1 Ribosomal protein L19e UNC-79 PF14776.6 ORF27808 - 0.25 10.1 2.0 0.32 9.7 2.0 1.1 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 UPF0227 PF05728.12 ORF27279 - 2.4e-74 249.3 0.0 2.8e-74 249.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) Abhydrolase_6 PF12697.7 ORF27279 - 0.0015 19.2 0.4 0.078 13.6 0.2 2.1 1 1 1 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF27279 - 0.039 13.2 0.0 0.18 11.0 0.0 1.9 2 0 0 2 2 2 0 Serine aminopeptidase, S33 DUF4291 PF14124.6 ORF25344 - 1.6e-45 155.2 0.7 3.8e-44 150.7 0.7 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4291) zf-RING_2 PF13639.6 ORF1943 - 6.4e-12 45.6 7.5 6.4e-12 45.6 7.5 2.0 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF1943 - 3.7e-08 33.0 5.3 3.7e-08 33.0 5.3 2.3 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF1943 - 4e-08 33.0 11.3 5.4e-08 32.6 7.8 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF1943 - 1.2e-06 28.7 8.0 1.2e-06 28.7 8.0 1.9 2 1 0 2 2 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF1943 - 4.6e-06 26.6 4.1 4.6e-06 26.6 4.1 2.0 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF1943 - 6.2e-06 25.9 6.3 6.2e-06 25.9 6.3 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF1943 - 2.4e-05 24.2 9.9 4.6e-05 23.3 6.6 2.2 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF1943 - 0.00011 21.9 10.0 0.00024 20.9 4.6 2.3 1 1 1 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF1943 - 0.00021 21.3 5.8 0.00034 20.6 5.8 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF1943 - 0.00055 19.7 6.9 0.00055 19.7 6.9 2.0 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF1943 - 0.00058 20.0 7.6 0.0021 18.2 7.6 2.0 1 1 0 1 1 1 1 FANCL C-terminal domain Rad50_zn_hook PF04423.14 ORF1943 - 0.0018 18.1 0.1 0.004 17.0 0.1 1.6 1 0 0 1 1 1 1 Rad50 zinc hook motif RINGv PF12906.7 ORF1943 - 0.002 18.2 7.2 0.0048 17.0 7.2 1.7 1 0 0 1 1 1 1 RING-variant domain Zn_ribbon_17 PF17120.5 ORF1943 - 0.0045 16.6 8.5 0.0045 16.6 8.5 2.2 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type PAN_2 PF08276.11 ORF1943 - 0.013 15.7 1.2 0.024 14.7 0.3 2.0 2 0 0 2 2 2 0 PAN-like domain PHD PF00628.29 ORF1943 - 0.11 12.5 7.2 0.26 11.2 7.2 1.7 1 0 0 1 1 1 0 PHD-finger zf-C3HC4_4 PF15227.6 ORF1943 - 0.71 10.1 10.5 0.84 9.9 6.7 2.7 1 1 2 3 3 3 0 zinc finger of C3HC4-type, RING Prok-RING_1 PF14446.6 ORF1943 - 3.3 7.7 13.6 0.36 10.8 4.0 2.6 2 1 1 3 3 3 0 Prokaryotic RING finger family 1 zf-RING-like PF08746.11 ORF1943 - 5 7.5 9.8 14 6.1 9.8 1.9 1 1 0 1 1 1 0 RING-like domain 2-Hacid_dh_C PF02826.19 ORF18826 - 1.6e-44 151.4 0.0 3.3e-44 150.4 0.0 1.5 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 ORF18826 - 1e-06 28.4 0.0 1.5e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain AdoHcyase_NAD PF00670.21 ORF18826 - 2e-05 24.7 0.0 3e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ThiF PF00899.21 ORF18826 - 0.0013 18.1 0.0 0.0023 17.3 0.0 1.3 1 0 0 1 1 1 1 ThiF family NAD_binding_2 PF03446.15 ORF18826 - 0.0027 17.9 0.0 0.004 17.3 0.0 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 ORF18826 - 0.0052 16.1 0.0 0.0063 15.8 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 ORF18826 - 0.008 16.7 0.0 0.013 16.0 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF18826 - 0.013 14.7 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ELFV_dehydrog PF00208.21 ORF18826 - 0.02 14.6 0.0 0.032 13.9 0.0 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TrkA_N PF02254.18 ORF18826 - 0.025 14.8 0.0 0.042 14.1 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Shikimate_DH PF01488.20 ORF18826 - 0.041 14.0 0.0 0.066 13.3 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase XdhC_C PF13478.6 ORF18826 - 0.063 13.8 0.0 0.083 13.4 0.0 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain F420_oxidored PF03807.17 ORF18826 - 0.08 13.5 0.0 0.17 12.5 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 ORF18826 - 0.083 13.3 0.0 0.12 12.8 0.0 1.6 1 1 0 1 1 1 0 Putative NAD(P)-binding Oxidored_nitro PF00148.19 ORF18826 - 0.12 11.1 0.0 0.15 10.7 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Pro_isomerase PF00160.21 ORF18343 - 2.1e-26 93.1 0.1 2.6e-26 92.8 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Phage_T4_Gp30_7 PF06919.11 ORF17516 - 0.035 14.2 0.0 0.062 13.5 0.0 1.4 1 0 0 1 1 1 0 Phage Gp30.7 protein ARS2 PF04959.13 ORF17429 - 7.7e-13 49.3 8.1 8.9e-13 49.0 7.6 1.4 1 1 0 1 1 1 1 Arsenite-resistance protein 2 zf-C2H2 PF00096.26 ORF17429 - 0.014 15.8 1.4 0.014 15.8 1.4 1.8 2 0 0 2 2 2 0 Zinc finger, C2H2 type NOC3p PF07540.11 ORF17429 - 0.062 13.8 0.4 0.14 12.7 0.4 1.5 1 0 0 1 1 1 0 Nucleolar complex-associated protein zf-C2H2_4 PF13894.6 ORF17429 - 0.22 12.5 1.4 0.56 11.2 1.4 1.7 1 0 0 1 1 1 0 C2H2-type zinc finger FKS1_dom1 PF14288.6 ORF17429 - 3.2 8.1 8.5 4.1 7.8 5.1 2.4 1 1 1 2 2 2 0 1,3-beta-glucan synthase subunit FKS1, domain-1 RMF PF04957.12 ORF15221 - 0.011 16.0 2.0 0.022 15.0 2.0 1.4 1 0 0 1 1 1 0 Ribosome modulation factor PEP-utilizers_C PF02896.18 ORF150502 - 1.5e-08 34.1 0.0 6e-07 28.9 0.0 2.1 1 1 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain Glycos_transf_1 PF00534.20 ORF150502 - 0.14 11.7 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 zf-TRAF PF02176.18 ORF149012 - 5.6e-10 39.8 18.8 1.9e-08 34.9 6.4 2.4 1 1 1 2 2 2 2 TRAF-type zinc finger zf-TRAF_2 PF15965.5 ORF149012 - 5.9e-08 33.1 8.2 5.9e-08 33.1 8.2 2.2 1 1 1 2 2 2 1 TRAF-like zinc-finger FAM184 PF15665.5 ORF149012 - 0.00062 19.6 2.5 0.001 18.9 2.5 1.3 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B Sina PF03145.16 ORF149012 - 0.0036 17.3 19.9 0.0042 17.0 2.5 2.9 1 1 1 2 2 2 1 Seven in absentia protein family Uso1_p115_C PF04871.13 ORF149012 - 0.0079 16.6 3.6 0.014 15.7 3.6 1.4 1 0 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, C terminal region DUF1579 PF07617.11 ORF149012 - 0.064 13.2 0.7 0.095 12.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1579) GST_C_3 PF14497.6 ORF148263 - 4.6e-16 58.8 0.3 7.5e-16 58.1 0.3 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF148263 - 2.5e-10 40.4 0.1 5.2e-10 39.4 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF148263 - 3.8e-10 40.0 1.6 4.1e-10 39.9 0.1 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF148263 - 9.5e-08 32.0 0.0 3.2e-07 30.3 0.0 2.0 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF148263 - 4.2e-05 23.9 0.1 0.00023 21.5 0.1 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF148263 - 0.014 15.7 0.0 0.037 14.3 0.0 1.7 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain DRIM PF07539.12 ORF148263 - 0.021 13.1 0.0 0.027 12.8 0.0 1.1 1 0 0 1 1 1 0 Down-regulated in metastasis GST_C_6 PF17171.4 ORF148263 - 0.064 13.1 0.1 0.12 12.2 0.1 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain PDCD2_C PF04194.13 ORF144933 - 4e-32 111.7 0.4 5.6e-32 111.2 0.4 1.4 1 1 0 1 1 1 1 Programmed cell death protein 2, C-terminal putative domain Rhabdo_ncap PF00945.18 ORF144933 - 0.0075 15.2 0.1 0.0098 14.8 0.1 1.1 1 0 0 1 1 1 1 Rhabdovirus nucleocapsid protein DUF3295 PF11702.8 ORF144933 - 0.2 11.0 1.9 0.24 10.7 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) Homeodomain PF00046.29 ORF143747 - 0.0093 15.8 0.6 0.018 14.9 0.6 1.5 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF143747 - 0.1 12.5 0.1 0.27 11.1 0.1 1.7 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Snf7 PF03357.21 ORF142801 - 9.3e-22 77.4 13.9 9.3e-22 77.4 13.9 1.5 1 1 1 2 2 2 1 Snf7 DUF1110 PF06533.12 ORF142801 - 0.0047 16.9 0.4 0.0089 16.0 0.2 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1110) HTH_Crp_2 PF13545.6 ORF142801 - 0.013 15.4 0.1 0.8 9.7 0.0 2.5 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain GCN5L1 PF06320.13 ORF142801 - 0.054 13.6 7.4 1.3 9.2 3.6 2.8 3 0 0 3 3 3 0 GCN5-like protein 1 (GCN5L1) DUF4709 PF15821.5 ORF142801 - 0.077 13.3 2.3 0.55 10.5 0.0 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4709) CorA PF01544.18 ORF142801 - 0.12 11.7 2.3 0.19 11.0 0.1 1.9 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein MCR_C PF04609.12 ORF142801 - 0.23 10.5 3.3 0.17 11.0 0.7 1.9 2 0 0 2 2 2 0 Methyl-coenzyme M reductase operon protein C KfrA_N PF11740.8 ORF142801 - 0.37 11.5 4.9 9.7 6.9 0.6 2.3 2 0 0 2 2 2 0 Plasmid replication region DNA-binding N-term TMCO5 PF14992.6 ORF142801 - 0.57 9.7 7.8 0.72 9.4 7.7 1.3 1 1 0 1 1 1 0 TMCO5 family Cor1 PF04803.12 ORF142801 - 1.3 9.3 9.2 3 8.1 0.3 2.7 3 0 0 3 3 3 0 Cor1/Xlr/Xmr conserved region Val_tRNA-synt_C PF10458.9 ORF142801 - 4.5 7.6 16.6 2.8 8.3 10.4 3.2 3 1 0 3 3 3 0 Valyl tRNA synthetase tRNA binding arm M PF02370.16 ORF142801 - 5.5 7.9 9.6 2.4 9.0 0.3 3.2 2 1 0 2 2 2 0 M protein repeat FKS1_dom1 PF14288.6 ORF13993 - 0.012 16.0 3.1 0.02 15.3 2.8 1.5 1 1 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 zf-LITAF-like PF10601.9 ORF139583 - 1.5e-08 34.7 12.8 2e-08 34.4 12.8 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain 7tm_1 PF00001.21 ORF139583 - 0.02 14.2 0.0 0.02 14.2 0.0 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) DUF2999 PF11212.8 ORF139461 - 0.037 14.3 0.4 0.14 12.5 0.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2999) Myf5 PF12232.8 ORF139461 - 0.18 12.6 3.1 0.35 11.7 3.1 1.4 1 0 0 1 1 1 0 Myogenic determination factor 5 Recep_L_domain PF01030.24 ORF139461 - 0.19 11.8 5.2 2.1 8.5 1.1 2.4 2 1 0 2 2 2 0 Receptor L domain COQ7 PF03232.13 ORF138713 - 2.7e-12 46.8 0.1 3.3e-12 46.5 0.1 1.2 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 GST_N PF02798.20 ORF138131 - 2e-10 40.9 0.3 4.9e-10 39.6 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF138131 - 2.7e-10 40.3 0.2 4.9e-10 39.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF138131 - 7.4e-06 26.1 0.3 1.2e-05 25.4 0.3 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF138131 - 3.1e-05 23.9 0.0 7.8e-05 22.6 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF138131 - 9.3e-05 22.8 0.0 0.00048 20.5 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF138131 - 0.00045 20.5 0.0 0.0012 19.1 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain RNaseH_C PF09293.10 ORF137115 - 0.018 15.4 2.3 0.032 14.6 2.3 1.6 1 1 0 1 1 1 0 T4 RNase H, C terminal DUF4094 PF13334.6 ORF137115 - 0.061 13.7 1.8 0.16 12.4 1.8 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) BLOC1_2 PF10046.9 ORF137115 - 0.29 11.4 6.0 0.79 10.1 6.0 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GST_C_3 PF14497.6 ORF136486 - 4.6e-16 58.8 0.3 7.5e-16 58.1 0.3 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF136486 - 2.5e-10 40.4 0.1 5.2e-10 39.4 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF136486 - 3.8e-10 40.0 1.6 4.1e-10 39.9 0.1 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF136486 - 9.5e-08 32.0 0.0 3.2e-07 30.3 0.0 2.0 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF136486 - 4.2e-05 23.9 0.1 0.00023 21.5 0.1 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF136486 - 0.014 15.7 0.0 0.037 14.3 0.0 1.7 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain DRIM PF07539.12 ORF136486 - 0.021 13.1 0.0 0.027 12.8 0.0 1.1 1 0 0 1 1 1 0 Down-regulated in metastasis GST_C_6 PF17171.4 ORF136486 - 0.064 13.1 0.1 0.12 12.2 0.1 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DUF3914 PF13053.6 ORF133460 - 0.0047 17.2 1.4 0.011 16.0 0.3 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3914) SL4P PF17618.2 ORF129687 - 0.04 13.9 0.2 0.093 12.8 0.2 1.6 1 0 0 1 1 1 0 Uncharacterized Strongylid L4 protein Homeodomain PF00046.29 ORF128654 - 0.0093 15.8 0.6 0.018 14.9 0.6 1.5 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF128654 - 0.1 12.5 0.1 0.27 11.1 0.1 1.7 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Receptor_2B4 PF11465.8 ORF128559 - 0.17 12.1 3.0 0.35 11.1 2.7 1.6 1 1 0 1 1 1 0 Natural killer cell receptor 2B4 YabA PF06156.13 ORF128559 - 1.3 9.7 6.4 1.7 9.4 5.4 1.8 1 1 1 2 2 2 0 Initiation control protein YabA Arabinose_bd PF12625.7 ORF125294 - 0.031 14.4 0.1 0.047 13.8 0.1 1.3 1 0 0 1 1 1 0 Arabinose-binding domain of AraC transcription regulator, N-term DUF1068 PF06364.12 ORF123245 - 0.075 12.9 2.1 0.1 12.4 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) V-set_CD47 PF08204.11 ORF122891 - 0.018 15.0 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 CD47 immunoglobulin-like domain zf-Di19 PF05605.12 ORF122891 - 0.065 13.5 0.5 0.065 13.5 0.5 2.2 2 1 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Chromate_transp PF02417.15 ORF121982 - 0.05 13.7 0.5 0.078 13.1 0.5 1.2 1 0 0 1 1 1 0 Chromate transporter ABC_cobalt PF09819.9 ORF121982 - 0.081 13.1 1.5 0.14 12.3 1.5 1.3 1 0 0 1 1 1 0 ABC-type cobalt transport system, permease component CutA1 PF03091.15 ORF11923 - 2.9e-33 113.7 0.2 4.1e-33 113.2 0.2 1.2 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein U-box PF04564.15 ORF119227 - 1.4 9.2 4.8 2.2 8.5 0.3 2.9 2 1 0 2 2 2 0 U-box domain Hint_2 PF13403.6 ORF119116 - 7.6e-08 32.8 0.1 6.6e-07 29.7 0.1 2.2 1 1 0 1 1 1 1 Hint domain Hint PF01079.20 ORF119116 - 0.0025 17.4 0.0 0.0039 16.7 0.0 1.3 1 1 0 1 1 1 1 Hint module PCMT PF01135.19 ORF118084 - 2.8e-82 275.6 0.0 3.3e-82 275.3 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 ORF118084 - 7.3e-07 28.5 0.0 9.2e-07 28.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.6 ORF118084 - 9.4e-06 25.5 0.0 1.6e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF118084 - 2.9e-05 24.7 0.0 5.4e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF118084 - 0.0036 17.9 0.0 0.01 16.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF118084 - 0.013 15.3 0.0 0.022 14.6 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain NodS PF05401.11 ORF118084 - 0.014 15.0 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) CMAS PF02353.20 ORF118084 - 0.051 12.9 0.0 0.083 12.2 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase GCD14 PF08704.10 ORF118084 - 0.083 12.5 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_32 PF13679.6 ORF118084 - 0.11 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 ORF118084 - 0.15 11.6 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain DREV PF05219.12 ORF118084 - 0.16 11.1 0.0 0.25 10.4 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase Calpain_III PF01067.22 ORF115498 - 6.5e-08 32.9 0.0 1.2e-07 32.1 0.0 1.4 1 0 0 1 1 1 1 Calpain large subunit, domain III PITH PF06201.13 ORF11476 - 5.4e-32 111.1 0.0 6.5e-32 110.8 0.0 1.1 1 0 0 1 1 1 1 PITH domain Csm1 PF12539.8 ORF11476 - 0.095 13.3 0.0 0.15 12.7 0.0 1.3 1 0 0 1 1 1 0 Chromosome segregation protein Csm1/Pcs1 cNMP_binding PF00027.29 ORF1128 - 1.1e-33 115.1 0.0 1e-19 70.4 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Saccharop_dh_N PF04455.12 ORF112403 - 0.002 18.5 0.3 0.12 12.8 0.1 2.4 2 0 0 2 2 2 1 LOR/SDH bifunctional enzyme conserved region DUF1043 PF06295.12 ORF112403 - 0.014 15.4 2.1 0.014 15.4 2.1 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1043) DUF3450 PF11932.8 ORF112403 - 0.015 14.6 1.8 0.022 14.0 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Lebercilin PF15619.6 ORF112403 - 0.027 14.1 11.8 0.11 12.2 11.8 2.0 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease TMPIT PF07851.13 ORF112403 - 0.067 12.4 5.0 0.11 11.8 5.0 1.5 1 0 0 1 1 1 0 TMPIT-like protein Tup_N PF08581.10 ORF112403 - 0.068 13.5 5.3 0.22 11.8 5.3 1.8 1 1 0 1 1 1 0 Tup N-terminal DUF1664 PF07889.12 ORF112403 - 0.077 13.0 5.2 0.14 12.2 5.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF3552 PF12072.8 ORF112403 - 0.59 9.5 12.1 0.15 11.5 8.6 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) Atg14 PF10186.9 ORF112403 - 1.3 8.0 10.1 1.5 7.9 10.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YfhO PF09586.10 ORF112403 - 8.8 4.4 8.5 10 4.2 8.5 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO ATP_bind_1 PF03029.17 ORF110519 - 6e-52 176.8 0.0 6.8e-52 176.6 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein GCM PF03615.15 ORF109180 - 0.0026 17.7 0.4 0.0056 16.6 0.2 1.6 1 1 0 1 1 1 1 GCM motif protein Succ_CoA_lig PF13607.6 ORF109180 - 0.03 14.1 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain ECH_1 PF00378.20 ORF105266 - 4.5e-46 157.2 0.0 5e-46 157.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF105266 - 7e-25 88.2 0.0 5.1e-23 82.1 0.0 1.9 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase LAL_C2 PF18603.1 ORF102959 - 4.3e-05 23.6 0.0 8.7e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 L-amino acid ligase C-terminal domain 2 ATPgrasp_Ter PF15632.6 ORF102959 - 0.13 12.0 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon Ribosomal_L40e PF01020.17 NODE_34926_length_619_cov_2.676370_g27952_i0reverse_frame_1 - 0.14 12.0 3.7 0.42 10.5 2.2 2.1 1 1 1 2 2 2 0 Ribosomal L40e family RAP PF08373.10 NODE_34910_length_619_cov_99.541096_g27936_i0reverse_frame_1 - 8.7e-05 22.5 0.0 0.00016 21.7 0.0 1.4 1 0 0 1 1 1 1 RAP domain SIMPL PF04402.14 NODE_34910_length_619_cov_99.541096_g27936_i0reverse_frame_1 - 0.047 14.1 0.1 0.066 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF541) DUF3489 PF11994.8 NODE_34906_length_619_cov_130.214041_g27932_i0forward_frame_1 - 0.13 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) RCDG1 PF15725.5 NODE_34868_length_620_cov_2.882051_g27900_i0forward_frame_1 - 0.17 12.3 1.3 0.34 11.4 1.3 1.4 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein OppC_N PF12911.7 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_1 - 3.2e-10 39.8 0.1 1.4 8.9 0.0 5.1 5 0 0 5 5 5 3 N-terminal TM domain of oligopeptide transport permease C IncFII_repA PF02387.15 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_1 - 3e-05 23.4 7.2 0.33 10.1 0.1 4.2 3 1 1 4 4 4 3 IncFII RepA protein family DUF3397 PF11877.8 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_1 - 0.00034 20.8 0.8 0.31 11.3 0.0 3.0 2 1 1 3 3 3 2 Protein of unknown function (DUF3397) Nitroreductase PF00881.24 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_1 - 0.0042 17.2 2.0 1.7 8.7 0.1 2.2 2 0 0 2 2 2 2 Nitroreductase family HCV_NS5a_1a PF08300.13 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_1 - 0.012 15.7 4.8 4.4 7.5 0.0 3.6 2 2 1 3 3 3 0 Hepatitis C virus non-structural 5a zinc finger domain DNA_pol_A_exo1 PF01612.20 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_1 - 0.12 12.0 7.1 32 4.2 0.1 4.3 1 1 4 5 5 5 0 3'-5' exonuclease Chlam_OMP3 PF03503.13 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_1 - 0.17 12.2 18.0 14 6.1 0.6 5.1 5 0 0 5 5 5 0 Chlamydia cysteine-rich outer membrane protein 3 DUF4821 PF16092.5 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_1 - 0.27 10.8 1.5 5.8 6.5 0.1 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4821) Zn-ribbon_8 PF09723.10 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_1 - 0.00088 19.3 18.4 1.4 9.1 0.2 5.4 5 0 0 5 5 5 2 Zinc ribbon domain DUF4724 PF15852.5 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_1 - 0.00094 19.6 7.2 14 6.2 0.0 4.8 1 1 4 5 5 5 2 Domain of unknown function (DUF4724) zinc_ribbon_9 PF14369.6 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_1 - 0.0011 19.2 13.2 3.1 8.2 0.1 5.5 5 0 0 5 5 5 2 zinc-ribbon Orexin_rec2 PF03827.13 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_1 - 0.03 14.3 4.5 48 4.1 0.0 4.8 1 1 4 5 5 5 0 Orexin receptor type 2 PIN_11 PF18479.1 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_1 - 0.12 12.6 1.2 45 4.2 0.0 3.6 3 2 1 5 5 5 0 PIN like domain zf-ribbon_3 PF13248.6 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_1 - 0.26 10.7 17.3 15 5.1 0.2 5.6 5 0 0 5 5 5 0 zinc-ribbon domain DUF3452 PF11934.8 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_1 - 0.45 10.1 5.3 14 5.2 0.1 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3452) SWIM PF04434.17 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_1 - 1.9 8.3 46.0 2.8 7.7 0.6 6.1 6 0 0 6 6 6 0 SWIM zinc finger HEPN PF05168.14 NODE_34811_length_621_cov_84.706485_g27848_i0reverse_frame_1 - 0.061 13.5 0.7 0.061 13.5 0.7 2.4 2 0 0 2 2 2 0 HEPN domain Mcm10 PF09332.11 NODE_34811_length_621_cov_84.706485_g27848_i0reverse_frame_1 - 0.14 11.5 14.7 0.21 11.0 14.6 1.4 1 1 0 1 1 1 0 Mcm10 replication factor Totivirus_coat PF05518.11 NODE_34811_length_621_cov_84.706485_g27848_i0reverse_frame_1 - 0.17 9.9 4.5 0.2 9.7 4.5 1.1 1 0 0 1 1 1 0 Totivirus coat protein GET2 PF08690.10 NODE_34811_length_621_cov_84.706485_g27848_i0reverse_frame_1 - 0.47 10.1 9.5 0.31 10.7 8.0 1.4 1 1 0 1 1 1 0 GET complex subunit GET2 Dynein_AAA_lid PF17852.1 NODE_34760_length_622_cov_68.413969_g27802_i0forward_frame_3 - 1e-10 41.8 1.0 6.7e-10 39.2 1.0 2.1 1 1 0 1 1 1 1 Dynein heavy chain AAA lid domain AsnC_trans_reg2 PF17805.1 NODE_34760_length_622_cov_68.413969_g27802_i0forward_frame_2 - 0.019 15.1 0.2 0.029 14.5 0.2 1.3 1 0 0 1 1 1 0 AsnC-like ligand binding domain COG6 PF06419.11 NODE_34753_length_622_cov_94.105622_g27796_i0forward_frame_2 - 0.014 13.6 0.1 0.017 13.4 0.1 1.1 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 Eclosion PF04736.12 NODE_34753_length_622_cov_94.105622_g27796_i0forward_frame_2 - 0.098 12.4 0.7 12 5.7 0.1 2.3 2 0 0 2 2 2 0 Eclosion hormone IL7 PF01415.16 NODE_34742_length_622_cov_148.768313_g27785_i0forward_frame_3 - 0.0076 16.3 1.4 0.012 15.6 1.4 1.3 1 0 0 1 1 1 1 Interleukin 7/9 family UPF0182 PF03699.13 NODE_34719_length_623_cov_2.671769_g27764_i0forward_frame_3 - 0.2 9.8 2.1 0.23 9.6 2.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) Gaa1 PF04114.14 NODE_34719_length_623_cov_2.671769_g27764_i0forward_frame_3 - 0.22 10.5 3.2 0.21 10.6 3.2 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component SPC25 PF06703.11 NODE_34719_length_623_cov_2.671769_g27764_i0forward_frame_3 - 2.5 7.9 5.2 0.55 10.0 0.3 2.0 2 0 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) GHMP_kinases_N PF00288.26 NODE_34715_length_623_cov_18.068027_g27760_i0reverse_frame_2 - 0.034 14.4 0.4 0.065 13.5 0.4 1.5 1 1 0 1 1 1 0 GHMP kinases N terminal domain FPV060 PF17614.2 NODE_34690_length_623_cov_154.739796_g27737_i0forward_frame_2 - 0.068 12.6 0.0 0.089 12.2 0.0 1.2 1 0 0 1 1 1 0 Viral CC-type chemokine DUF3920 PF13058.6 NODE_34686_length_623_cov_184.593537_g27733_i0reverse_frame_2 - 0.038 14.2 0.7 0.1 12.8 0.7 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3920) APOBEC1 PF18769.1 NODE_34683_length_623_cov_252.775510_g27730_i0reverse_frame_2 - 0.016 15.5 0.3 0.026 14.8 0.3 1.5 1 0 0 1 1 1 0 APOBEC1 NAD1 PF18778.1 NODE_34683_length_623_cov_252.775510_g27730_i0reverse_frame_2 - 0.28 11.3 1.9 0.43 10.6 1.7 1.4 1 1 0 1 1 1 0 Novel AID APOBEC clade 1 SLC3A2_N PF16028.5 NODE_34683_length_623_cov_252.775510_g27730_i0forward_frame_3 - 0.016 14.7 0.5 0.043 13.4 0.5 1.7 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus FeThRed_B PF02943.15 NODE_34683_length_623_cov_252.775510_g27730_i0forward_frame_3 - 0.15 12.1 2.8 0.26 11.3 2.8 1.4 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain DUF2431 PF10354.9 NODE_34683_length_623_cov_252.775510_g27730_i0forward_frame_2 - 5.2e-13 49.6 0.0 5.4e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Pox_A31 PF05771.11 NODE_34669_length_624_cov_2.938879_g27720_i0forward_frame_3 - 0.094 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A31 protein Tmpp129 PF10272.9 NODE_34669_length_624_cov_2.938879_g27720_i0forward_frame_3 - 0.12 11.7 0.1 0.15 11.3 0.1 1.1 1 0 0 1 1 1 0 Putative transmembrane protein precursor Presenilin PF01080.17 NODE_34664_length_624_cov_66.314092_g27716_i0reverse_frame_3 - 2.5 6.8 4.4 2.9 6.6 4.4 1.2 1 0 0 1 1 1 0 Presenilin DUF4337 PF14235.6 NODE_34664_length_624_cov_66.314092_g27716_i0reverse_frame_3 - 8 6.6 6.6 2.6 8.1 3.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) DUF1298 PF06974.13 ORF99384 - 2.1e-10 40.7 0.0 3.1e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) PqiA PF04403.13 ORF98905 - 0.00013 21.8 9.6 0.00018 21.4 9.6 1.2 1 0 0 1 1 1 1 Paraquat-inducible protein A FUN14 PF04930.15 ORF98905 - 0.083 13.3 0.0 0.15 12.5 0.0 1.5 1 0 0 1 1 1 0 FUN14 family UPF0114 PF03350.16 ORF98905 - 0.12 12.5 5.3 0.19 11.9 5.3 1.4 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 UPF0139 PF03669.13 ORF98905 - 0.77 9.7 5.0 0.11 12.4 0.5 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) VKOR PF07884.14 ORF98905 - 1.6 8.9 8.5 3.9 7.7 8.5 1.7 1 1 0 1 1 1 0 Vitamin K epoxide reductase family Lactococcin_972 PF09683.10 ORF98130 - 0.32 11.6 0.1 0.32 11.6 0.1 1.8 2 0 0 2 2 2 0 Bacteriocin (Lactococcin_972) GST_C_3 PF14497.6 ORF97330 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF97330 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF97330 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF97330 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF97330 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain MORN PF02493.20 ORF96873 - 0.00051 19.8 0.1 0.00051 19.8 0.1 3.2 4 0 0 4 4 4 1 MORN repeat DUF4816 PF16086.5 ORF96873 - 0.056 13.4 1.0 0.056 13.4 1.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4816) RNase_HII PF01351.18 ORF95907 - 3.4e-13 49.9 0.0 6.8e-12 45.6 0.0 2.2 1 1 0 1 1 1 1 Ribonuclease HII Proteasome PF00227.26 ORF95476 - 3.6e-43 147.3 0.3 4.4e-43 147.0 0.3 1.0 1 0 0 1 1 1 1 Proteasome subunit ABC_tran PF00005.27 ORF91854 - 6.3e-27 94.8 0.1 9.5e-27 94.2 0.1 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF91854 - 6.1e-08 32.4 2.8 3.1e-05 23.5 0.5 2.8 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF91854 - 0.00091 19.1 0.1 0.59 9.9 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_10 PF12846.7 ORF91854 - 0.018 14.0 0.1 0.032 13.2 0.1 1.5 1 1 0 1 1 1 0 AAA-like domain MMR_HSR1 PF01926.23 ORF91854 - 0.024 14.7 0.1 0.061 13.4 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase DUF505 PF04458.12 ORF91854 - 0.046 12.1 0.0 0.069 11.5 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF505) DUF87 PF01935.17 ORF91854 - 0.059 13.5 0.4 0.059 13.5 0.4 1.6 2 1 0 2 2 2 0 Helicase HerA, central domain AAA_29 PF13555.6 ORF91854 - 0.065 13.0 0.2 0.14 11.9 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain GST_C_3 PF14497.6 ORF91522 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF91522 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF91522 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF91522 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF91522 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DUF1175 PF06672.11 ORF89571 - 8.1e-76 254.6 0.1 9.6e-76 254.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1175) NLPC_P60 PF00877.19 ORF89571 - 0.00048 20.1 1.9 0.002 18.1 1.9 2.0 1 1 0 1 1 1 1 NlpC/P60 family adh_short PF00106.25 ORF86349 - 2.3e-09 37.0 0.1 3.2e-09 36.5 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF86349 - 9.9e-05 22.0 0.0 0.00013 21.7 0.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DHHC PF01529.20 ORF84032 - 1.3e-19 70.6 7.9 1.3e-19 70.6 7.9 2.8 1 1 1 2 2 2 1 DHHC palmitoyltransferase DUF2177 PF09945.9 ORF84032 - 0.06 13.4 4.1 0.07 13.2 2.5 1.8 2 0 0 2 2 2 0 Predicted membrane protein (DUF2177) TssN PF17555.2 ORF84032 - 0.31 10.4 7.4 0.026 13.9 2.6 1.6 2 0 0 2 2 2 0 Type VI secretion system, TssN Fer4_10 PF13237.6 ORF84032 - 0.9 9.7 8.4 0.61 10.2 0.9 2.8 3 0 0 3 3 3 0 4Fe-4S dicluster domain DUF1272 PF06906.11 ORF84032 - 1.8 8.7 7.5 1.4 9.0 3.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) GREB1 PF15782.5 ORF82032 - 0.26 8.3 8.5 0.099 9.8 6.3 1.3 1 1 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Raf1_HTH PF18579.1 ORF80501 - 0.0061 16.2 0.1 0.029 14.0 0.0 2.1 3 0 0 3 3 3 1 Rubisco accumulation factor 1 helix turn helix domain EIIA-man PF03610.16 ORF79900 - 4.8e-27 94.5 0.0 6.5e-27 94.1 0.0 1.2 1 0 0 1 1 1 1 PTS system fructose IIA component Mga PF05043.13 ORF78912 - 0.075 13.6 1.9 0.16 12.5 0.4 2.2 2 0 0 2 2 2 0 Mga helix-turn-helix domain TIM21 PF08294.11 ORF78912 - 0.084 12.8 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 TIM21 HXXSHH PF07586.11 ORF77975 - 0.034 13.7 0.1 0.045 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1552) Toxin_2 PF00451.19 ORF77975 - 0.036 14.4 0.6 0.036 14.4 0.6 2.8 3 0 0 3 3 3 0 Scorpion short toxin, BmKK2 DHHC PF01529.20 ORF76694 - 7.7 6.6 10.9 38 4.4 7.5 2.3 1 1 1 2 2 2 0 DHHC palmitoyltransferase Joubert PF15392.6 ORF76110 - 0.15 11.7 0.6 0.2 11.3 0.6 1.1 1 0 0 1 1 1 0 Joubert syndrome-associated SSP160 PF06933.11 ORF76110 - 7.6 4.6 11.1 10 4.2 11.1 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 zf-CCHC PF00098.23 ORF75641 - 0.00042 20.3 5.2 0.00085 19.3 5.2 1.6 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_5 PF14787.6 ORF75641 - 0.0023 17.6 7.2 0.0065 16.2 7.2 1.8 1 0 0 1 1 1 1 GAG-polyprotein viral zinc-finger zf-CCHC_4 PF14392.6 ORF75641 - 0.065 13.0 1.3 0.12 12.2 1.3 1.4 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_2 PF13696.6 ORF75641 - 0.47 10.3 2.4 0.76 9.7 2.4 1.4 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_3 PF13917.6 ORF75641 - 3.8 7.5 8.7 0.52 10.3 3.6 2.2 2 0 0 2 2 2 0 Zinc knuckle GST_C_3 PF14497.6 ORF70995 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF70995 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF70995 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF70995 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF70995 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain SH3-RhoG_link PF16609.5 ORF70490 - 0.41 10.3 1.2 0.57 9.9 1.2 1.1 1 0 0 1 1 1 0 SH3-RhoGEF linking unstructured region SMN PF06003.12 ORF70092 - 0.015 14.6 2.9 0.015 14.6 2.9 2.0 1 1 1 2 2 2 0 Survival motor neuron protein (SMN) AF-4 PF05110.13 ORF70092 - 0.59 8.2 16.7 0.68 7.9 16.7 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein Raftlin PF15250.6 ORF70092 - 1.9 7.1 6.5 2.3 6.9 6.5 1.2 1 0 0 1 1 1 0 Raftlin LAP1C PF05609.12 ORF70092 - 4.9 6.1 6.9 6.2 5.8 6.9 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) PetN PF03742.14 ORF69440 - 4 7.4 6.3 15 5.6 1.2 2.7 2 0 0 2 2 2 0 PetN EF-hand_6 PF13405.6 ORF69381 - 0.00098 18.9 0.4 0.011 15.5 0.2 2.7 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF69381 - 0.002 17.5 2.3 0.0041 16.6 0.5 2.5 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF69381 - 0.0038 16.7 0.9 0.015 14.8 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF69381 - 0.026 15.0 1.8 0.026 15.0 1.8 2.2 2 0 0 2 2 2 0 EF-hand domain pair Dockerin_1 PF00404.18 ORF69381 - 0.035 14.3 0.2 0.16 12.2 0.2 2.1 1 1 0 1 1 1 0 Dockerin type I domain Glyco_transf_8 PF01501.20 ORF68571 - 5.5e-09 35.9 4.2 3.2e-06 26.9 4.2 2.1 1 1 0 1 1 1 1 Glycosyl transferase family 8 Mannosyl_trans3 PF11051.8 ORF68571 - 0.036 13.4 0.0 0.052 12.9 0.0 1.2 1 0 0 1 1 1 0 Mannosyltransferase putative FHA PF00498.26 ORF68392 - 8.4e-08 32.5 0.2 1.6e-07 31.5 0.2 1.6 1 1 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF68392 - 0.002 18.4 0.0 0.0057 16.9 0.0 1.6 1 1 1 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain RINGv PF12906.7 ORF68392 - 0.013 15.6 3.3 0.013 15.6 3.3 2.2 2 0 0 2 2 2 0 RING-variant domain FANCL_C PF11793.8 ORF68392 - 0.19 11.9 5.6 0.062 13.5 2.4 1.9 2 0 0 2 2 2 0 FANCL C-terminal domain Hemopexin PF00045.19 ORF68392 - 0.3 11.1 2.9 0.84 9.6 0.1 2.5 3 0 0 3 3 3 0 Hemopexin DUF1298 PF06974.13 ORF67899 - 0.00034 20.6 0.0 0.00051 20.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) SBP_bac_6 PF13343.6 ORF67899 - 0.051 13.0 0.0 1.4 8.3 0.0 2.4 3 0 0 3 3 3 0 Bacterial extracellular solute-binding protein CDP-OH_P_transf PF01066.21 ORF67661 - 1.7e-12 47.9 0.4 1.7e-12 47.9 0.4 2.4 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF2207 PF09972.9 ORF67661 - 0.15 10.8 1.5 0.21 10.3 1.5 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5325 PF17259.2 ORF67661 - 2.6 8.0 6.9 0.26 11.2 1.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5325) DUF3139 PF11337.8 ORF60553 - 0.81 10.4 4.0 0.78 10.4 0.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) DUF3810 PF12725.7 ORF60553 - 1.4 8.2 10.9 1.3 8.3 3.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3810) Syndecan PF01034.20 ORF60553 - 1.4 8.8 12.5 1.5 8.8 0.9 2.7 2 1 1 3 3 3 0 Syndecan domain DUF4953 PF16313.5 ORF59944 - 0.32 10.2 8.7 0.014 14.6 2.6 1.6 2 0 0 2 2 2 0 Met-zincin ACCA PF03255.14 ORF59944 - 0.55 10.1 5.5 0.095 12.6 1.6 1.7 2 0 0 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TMPIT PF07851.13 ORF59944 - 3.7 6.7 14.7 0.14 11.3 8.5 1.7 1 1 1 2 2 2 0 TMPIT-like protein Kinesin PF00225.23 ORF56910 - 2.2e-22 79.4 0.0 2.8e-22 79.1 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain FumaraseC_C PF10415.9 ORF55478 - 1.4e-05 25.4 10.4 0.058 13.8 0.7 4.4 4 0 0 4 4 4 2 Fumarase C C-terminus PhageMin_Tail PF10145.9 ORF55478 - 0.00036 20.4 15.0 0.02 14.8 2.7 3.1 2 1 0 3 3 3 3 Phage-related minor tail protein ISP1_C PF18161.1 ORF55478 - 0.0034 17.4 0.0 1.7 8.7 0.0 3.2 1 1 1 3 3 3 1 ISP1 C-terminal RHH_4 PF13467.6 ORF55478 - 0.023 14.6 3.7 28 4.7 0.1 4.0 3 1 1 4 4 4 0 Ribbon-helix-helix domain Phage_CI_repr PF07022.13 ORF55478 - 0.055 13.6 0.1 6.6 6.9 0.0 3.5 3 1 0 3 3 3 0 Bacteriophage CI repressor helix-turn-helix domain DUF3235 PF11574.8 ORF55478 - 0.062 14.2 5.0 7.9 7.4 1.0 3.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3235) Get5_C PF18514.1 ORF55478 - 0.063 13.0 11.5 17 5.2 0.0 5.0 5 0 0 5 5 5 0 Get5 C-terminal domain DUF4213 PF13938.6 ORF55478 - 0.071 13.3 1.1 8.2 6.7 0.2 2.6 2 1 0 2 2 2 0 Putative heavy-metal chelation NTP_transf_5 PF14907.6 ORF55478 - 0.19 11.3 0.2 87 2.6 0.0 3.5 3 1 1 4 4 4 0 Uncharacterised nucleotidyltransferase DUF1104 PF06518.11 ORF55478 - 0.22 11.9 6.2 0.16 12.4 4.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1104) OKR_DC_1_C PF03711.15 ORF55478 - 0.32 11.3 1.1 0.7 10.2 0.4 1.9 2 1 1 3 3 2 0 Orn/Lys/Arg decarboxylase, C-terminal domain HTH_Tnp_ISL3 PF13542.6 ORF55478 - 0.49 9.8 1.4 7.8 6.0 0.1 3.2 3 1 1 4 4 4 0 Helix-turn-helix domain of transposase family ISL3 QslA_E PF18226.1 ORF55478 - 1.4 8.9 7.1 14 5.7 0.1 3.9 2 1 2 4 4 4 0 LasR-specific antiactivator QslA chain E GST_C_3 PF14497.6 ORF53636 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF53636 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF53636 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF53636 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF53636 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain PhoLip_ATPase_C PF16212.5 ORF48714 - 0.003 17.3 1.5 0.0039 17.0 1.5 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal PrgI PF12666.7 ORF48714 - 7.3 7.4 7.4 3.6 8.4 0.8 2.2 1 1 1 2 2 2 0 PrgI family protein B3_4 PF03483.17 ORF46366 - 0.17 11.6 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 B3/4 domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks111.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks111.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks111.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks111.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:01:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Histone PF00125.24 ORF44782 - 0.014 15.7 0.1 0.014 15.7 0.1 2.5 1 1 0 2 2 2 0 Core histone H2A/H2B/H3/H4 Homeobox_KN PF05920.11 ORF44517 - 2.5e-16 59.3 0.3 4.6e-16 58.4 0.3 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF44517 - 2.1e-05 24.3 0.3 6.1e-05 22.8 0.3 1.8 1 0 0 1 1 1 1 Homeodomain DUF2716 PF10898.8 ORF42178 - 0.14 12.5 0.0 0.19 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2716) Proteasome PF00227.26 ORF39037 - 3.6e-43 147.3 0.3 4.4e-43 147.0 0.3 1.0 1 0 0 1 1 1 1 Proteasome subunit RNA_pol PF00940.19 ORF38117 - 2.3e-41 142.0 0.1 4.1e-41 141.2 0.1 1.4 1 1 0 1 1 1 1 DNA-dependent RNA polymerase Rhodanese_C PF12368.8 ORF3766 - 4e-19 68.8 15.5 7.9e-19 67.8 15.5 1.5 1 0 0 1 1 1 1 Rhodanase C-terminal Rhodanese PF00581.20 ORF3766 - 9.2e-13 48.7 0.0 1.6e-12 47.9 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain Zeta_toxin PF06414.12 ORF3766 - 0.046 13.0 0.0 0.067 12.5 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin Chlam_vir PF05475.11 ORF35402 - 0.021 14.6 0.0 0.035 13.8 0.0 1.3 1 0 0 1 1 1 0 Pgp3 C-terminal domain BtrH_N PF14399.6 ORF34389 - 0.097 12.9 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal ParBc PF02195.18 ORF32930 - 0.033 14.5 0.1 0.053 13.8 0.1 1.2 1 0 0 1 1 1 0 ParB-like nuclease domain DUF2201_N PF13203.6 ORF30852 - 0.25 10.9 2.7 0.29 10.7 2.7 1.3 1 0 0 1 1 1 0 Putative metallopeptidase domain Neural_ProG_Cyt PF06567.11 ORF30852 - 0.68 10.2 8.6 0.16 12.2 5.1 1.8 2 0 0 2 2 2 0 Neural chondroitin sulphate proteoglycan cytoplasmic domain Ig_C19orf38 PF17737.1 ORF3063 - 0.059 13.7 0.0 0.088 13.2 0.0 1.3 1 0 0 1 1 1 0 Ig domain in C19orf38 (HIDE1) RNA_pol_Rpb5_C PF01191.19 ORF29342 - 1.4e-32 111.4 0.4 4.6e-32 109.7 0.4 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb5_N PF03871.14 ORF29342 - 4.1e-17 62.5 0.3 9.9e-17 61.3 0.2 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb5, N-terminal domain Sof1 PF04158.14 ORF29342 - 0.013 15.7 0.2 0.031 14.5 0.2 1.6 1 0 0 1 1 1 0 Sof1-like domain Glycos_transf_3 PF00591.21 ORF29342 - 0.051 13.2 0.0 0.076 12.6 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family, a/b domain Tfb5 PF06331.12 ORF29342 - 2.4 8.2 5.0 1.7 8.7 0.4 2.6 3 0 0 3 3 3 0 Transcription factor TFIIH complex subunit Tfb5 Joubert PF15392.6 ORF26104 - 0.15 11.7 0.6 0.2 11.3 0.6 1.1 1 0 0 1 1 1 0 Joubert syndrome-associated SSP160 PF06933.11 ORF26104 - 7.6 4.6 11.1 10 4.2 11.1 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Methyltransf_11 PF08241.12 ORF25733 - 1.8e-22 79.8 0.0 3e-22 79.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF25733 - 3.9e-17 62.8 0.0 6.6e-17 62.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF25733 - 3.9e-14 52.5 0.0 5.4e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 ORF25733 - 6.1e-14 52.1 0.0 8.5e-14 51.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF25733 - 1.1e-12 48.1 0.0 1.5e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF25733 - 2.5e-09 37.8 0.0 4e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 ORF25733 - 0.00022 21.2 0.0 0.0003 20.7 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_29 PF03141.16 ORF25733 - 0.0052 15.4 0.0 0.0062 15.1 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_2 PF00891.18 ORF25733 - 0.0077 15.6 0.0 0.01 15.2 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain NNMT_PNMT_TEMT PF01234.17 ORF25733 - 0.045 12.9 0.0 0.062 12.5 0.0 1.3 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family Epiglycanin_TR PF05647.11 ORF24329 - 0.016 15.1 3.7 0.016 15.1 3.7 1.9 2 0 0 2 2 2 0 Tandem-repeating region of mucin, epiglycanin-like FANCI_HD1 PF14679.6 ORF23632 - 0.078 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 FANCI helical domain 1 DUF3935 PF13071.6 ORF20280 - 8.8 7.0 8.9 8.7 7.0 0.4 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF3935) Toxin-deaminase PF14424.6 ORF19631 - 0.0048 17.0 0.1 0.0068 16.5 0.1 1.2 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases CysG_dimeriser PF10414.9 ORF19631 - 0.1 12.4 0.5 0.21 11.4 0.5 1.5 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region IGF2_C PF08365.11 ORF18765 - 0.0064 16.5 0.2 0.012 15.6 0.2 1.5 1 0 0 1 1 1 1 Insulin-like growth factor II E-peptide Bac_export_1 PF01311.20 ORF152485 - 0.0015 18.1 0.3 0.0022 17.6 0.3 1.1 1 0 0 1 1 1 1 Bacterial export proteins, family 1 RWD PF05773.22 ORF152485 - 0.03 14.6 0.1 0.032 14.5 0.1 1.3 1 0 0 1 1 1 0 RWD domain DUF872 PF05915.12 ORF152485 - 0.13 12.4 0.2 0.29 11.3 0.1 1.6 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) Aldedh PF00171.22 ORF149660 - 4.2e-06 25.6 0.0 6.7e-06 24.9 0.0 1.4 1 1 0 1 1 1 1 Aldehyde dehydrogenase family Minor_capsid_2 PF11114.8 ORF149084 - 0.024 14.7 0.0 0.05 13.7 0.0 1.5 1 0 0 1 1 1 0 Minor capsid protein FANCI_HD1 PF14679.6 ORF146479 - 0.078 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 FANCI helical domain 1 DUF5100 PF17029.5 ORF146057 - 0.11 12.4 0.1 3.1 7.7 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF5100) Exo_endo_phos PF03372.23 ORF144987 - 0.0055 16.2 0.0 0.0071 15.9 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family zf-C2H2 PF00096.26 ORF143671 - 5.9e-08 32.7 20.6 2.6e-05 24.4 4.0 4.0 4 0 0 4 4 4 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF143671 - 1e-06 28.9 0.7 1e-06 28.9 0.7 2.9 4 0 0 4 4 4 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF143671 - 0.00021 21.9 17.0 0.01 16.6 3.0 3.9 4 0 0 4 4 4 2 C2H2-type zinc finger PHD_like PF12910.7 ORF143671 - 0.0022 18.0 0.2 0.0029 17.6 0.2 1.4 1 0 0 1 1 1 1 Antitoxin of toxin-antitoxin, RelE / RelB, TA system zf-C2H2_8 PF15909.5 ORF143671 - 0.027 14.7 0.9 0.027 14.7 0.9 1.8 2 0 0 2 2 2 0 C2H2-type zinc ribbon zf-C2HC_2 PF13913.6 ORF143671 - 0.043 13.7 2.1 0.12 12.4 0.6 2.5 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-BED PF02892.15 ORF143671 - 0.11 12.6 9.8 1.4 9.0 1.0 3.6 3 0 0 3 3 3 0 BED zinc finger FANCL_C PF11793.8 ORF143671 - 0.12 12.6 6.7 3.6 7.8 0.4 3.0 2 1 0 2 2 2 0 FANCL C-terminal domain zf-C2H2_6 PF13912.6 ORF143671 - 0.71 9.9 10.9 7.5 6.7 3.6 3.5 3 0 0 3 3 3 0 C2H2-type zinc finger C2 PF00168.30 ORF140605 - 0.00027 21.2 0.0 0.00037 20.7 0.0 1.2 1 0 0 1 1 1 1 C2 domain MORN PF02493.20 ORF140537 - 0.00051 19.8 0.1 0.00051 19.8 0.1 3.2 4 0 0 4 4 4 1 MORN repeat DUF4816 PF16086.5 ORF140537 - 0.056 13.4 1.0 0.056 13.4 1.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4816) GST_C_3 PF14497.6 ORF139126 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF139126 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF139126 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF139126 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF139126 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Evr1_Alr PF04777.13 ORF135848 - 2.9e-10 40.5 0.1 5.3e-10 39.7 0.1 1.4 1 0 0 1 1 1 1 Erv1 / Alr family GST_C_3 PF14497.6 ORF133462 - 1.1e-15 57.6 0.5 1.7e-15 57.0 0.5 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF133462 - 3.2e-11 43.4 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF133462 - 7.2e-06 26.1 0.2 1.1e-05 25.5 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF133462 - 0.0067 15.8 0.1 0.0085 15.4 0.1 1.2 1 0 0 1 1 1 1 AIG1 family GST_N_3 PF13417.6 ORF133462 - 0.091 13.2 0.0 0.21 12.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DUF1345 PF07077.11 ORF130022 - 0.016 14.9 0.3 0.016 14.9 0.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1345) U-box PF04564.15 ORF128972 - 1.5e-11 44.2 0.1 3.2e-11 43.2 0.1 1.5 1 0 0 1 1 1 1 U-box domain Spc7 PF08317.11 ORF128972 - 0.0014 17.6 9.9 0.0031 16.5 9.9 1.5 1 1 0 1 1 1 1 Spc7 kinetochore protein ABC_tran_CTD PF16326.5 ORF128972 - 0.0016 18.6 4.6 0.76 10.1 0.3 2.4 2 0 0 2 2 2 2 ABC transporter C-terminal domain DUF3584 PF12128.8 ORF128972 - 0.0047 14.5 2.5 0.0062 14.1 2.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF5082 PF16888.5 ORF128972 - 0.0087 16.3 9.5 0.037 14.3 4.9 2.2 1 1 1 2 2 2 1 Domain of unknown function (DUF5082) DUF1664 PF07889.12 ORF128972 - 0.011 15.7 2.4 0.023 14.7 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Seryl_tRNA_N PF02403.22 ORF128972 - 0.018 15.2 8.3 0.21 11.8 5.2 2.3 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain ZapB PF06005.12 ORF128972 - 0.028 14.9 6.8 0.21 12.0 3.0 2.5 2 1 0 2 2 2 0 Cell division protein ZapB DUF2203 PF09969.9 ORF128972 - 0.031 15.0 4.0 1.7 9.3 0.1 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) FliJ PF02050.16 ORF128972 - 0.034 14.4 5.3 0.04 14.1 4.2 1.7 2 0 0 2 2 1 0 Flagellar FliJ protein APG6_N PF17675.1 ORF128972 - 0.035 14.6 9.1 0.059 13.9 9.1 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region Golgin_A5 PF09787.9 ORF128972 - 0.037 13.5 6.1 0.056 12.9 6.1 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF724 PF05266.14 ORF128972 - 0.04 13.7 5.1 0.084 12.7 4.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) zf-Nse PF11789.8 ORF128972 - 0.085 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit MutS_III PF05192.18 ORF128972 - 0.11 12.7 1.2 0.14 12.4 1.2 1.2 1 0 0 1 1 1 0 MutS domain III ER PF01133.17 ORF128972 - 0.12 12.4 2.1 0.29 11.2 0.4 2.1 1 1 1 2 2 2 0 Enhancer of rudimentary zf-NOSIP PF15906.5 ORF128972 - 0.13 12.4 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger of nitric oxide synthase-interacting protein YscO PF07321.12 ORF128972 - 0.16 11.9 3.6 0.34 10.9 3.6 1.5 1 1 0 1 1 1 0 Type III secretion protein YscO YgaB PF14182.6 ORF128972 - 0.29 11.6 5.8 0.23 11.9 2.1 2.6 1 1 1 2 2 2 0 YgaB-like protein DivIC PF04977.15 ORF128972 - 0.3 10.9 6.1 0.41 10.4 0.2 2.9 1 1 2 3 3 3 0 Septum formation initiator Prefoldin_2 PF01920.20 ORF128972 - 0.4 10.7 9.7 1.3 9.0 0.2 3.0 1 1 0 2 2 2 0 Prefoldin subunit KELK PF15796.5 ORF128972 - 0.5 10.9 9.8 4.6 7.8 3.5 2.9 2 1 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Fez1 PF06818.15 ORF128972 - 0.61 10.5 8.2 2.6 8.4 8.2 1.8 1 1 0 1 1 1 0 Fez1 Cep57_CLD_2 PF14197.6 ORF128972 - 0.91 9.7 7.2 4.4 7.5 0.9 2.8 1 1 0 2 2 2 0 Centrosome localisation domain of PPC89 BLOC1_2 PF10046.9 ORF128972 - 1 9.7 9.0 0.24 11.7 1.3 2.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Uso1_p115_C PF04871.13 ORF128972 - 1.1 9.6 7.9 1.9 8.8 7.2 1.7 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF4795 PF16043.5 ORF128972 - 1.3 8.6 9.6 1.7 8.2 5.8 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF4404 PF14357.6 ORF128972 - 1.3 9.7 5.1 1.6 9.4 0.5 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) DHR10 PF18595.1 ORF128972 - 1.4 9.0 8.5 6.9 6.8 0.9 2.3 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain FlaC_arch PF05377.11 ORF128972 - 3 8.3 7.4 2.1 8.8 0.2 3.6 2 1 2 4 4 4 0 Flagella accessory protein C (FlaC) ACCA PF03255.14 ORF128972 - 3.8 7.4 5.8 11 5.8 0.2 2.2 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CCDC-167 PF15188.6 ORF128972 - 4.1 7.8 8.9 79 3.7 8.9 2.9 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 TMPIT PF07851.13 ORF128972 - 4.5 6.4 7.4 13 4.9 7.0 1.7 1 1 0 1 1 1 0 TMPIT-like protein YabA PF06156.13 ORF128972 - 5 7.8 9.8 2.2e+02 2.6 7.2 2.7 2 1 0 2 2 1 0 Initiation control protein YabA FGF PF00167.18 ORF128486 - 0.072 13.2 0.1 0.13 12.3 0.1 1.5 1 0 0 1 1 1 0 Fibroblast growth factor DUF5100 PF17029.5 ORF128099 - 0.076 12.9 0.0 2.6 7.9 0.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF5100) Mga PF05043.13 ORF126750 - 0.075 13.6 1.9 0.16 12.5 0.4 2.2 2 0 0 2 2 2 0 Mga helix-turn-helix domain TIM21 PF08294.11 ORF126750 - 0.084 12.8 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 TIM21 Chlam_vir PF05475.11 ORF126332 - 0.021 14.6 0.0 0.035 13.8 0.0 1.3 1 0 0 1 1 1 0 Pgp3 C-terminal domain Mga PF05043.13 ORF125976 - 0.075 13.6 1.9 0.16 12.5 0.4 2.2 2 0 0 2 2 2 0 Mga helix-turn-helix domain TIM21 PF08294.11 ORF125976 - 0.084 12.8 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 TIM21 CCT PF06203.14 ORF125757 - 1.4e-05 25.1 12.1 2.3e-05 24.3 12.1 1.4 1 0 0 1 1 1 1 CCT motif CSD PF00313.22 ORF123481 - 0.00031 20.5 0.2 0.0035 17.2 0.1 2.2 2 0 0 2 2 2 1 'Cold-shock' DNA-binding domain FANCI_HD1 PF14679.6 ORF123182 - 0.078 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 FANCI helical domain 1 GST_C_2 PF13410.6 ORF122071 - 0.0091 16.0 0.1 0.017 15.1 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF122071 - 0.014 15.2 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF122071 - 0.021 15.6 0.0 0.035 14.8 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain EF-hand_6 PF13405.6 ORF119810 - 0.00098 18.9 0.4 0.011 15.5 0.2 2.7 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF119810 - 0.002 17.5 2.3 0.0041 16.6 0.5 2.5 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF119810 - 0.0038 16.7 0.9 0.015 14.8 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF119810 - 0.026 15.0 1.8 0.026 15.0 1.8 2.2 2 0 0 2 2 2 0 EF-hand domain pair Dockerin_1 PF00404.18 ORF119810 - 0.035 14.3 0.2 0.16 12.2 0.2 2.1 1 1 0 1 1 1 0 Dockerin type I domain DUF4713 PF15831.5 ORF119117 - 0.028 14.8 1.3 0.068 13.6 1.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) Roc PF08477.13 ORF117241 - 0.00019 21.7 0.0 0.00029 21.1 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF117241 - 0.0018 17.9 0.0 0.0028 17.3 0.0 1.3 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF117241 - 0.0048 16.4 0.0 0.0076 15.7 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_23 PF13476.6 ORF117241 - 0.0072 16.9 0.2 4.5 7.7 0.2 2.2 2 0 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.23 ORF117241 - 0.046 13.8 0.0 0.084 13.0 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA PF00004.29 ORF11548 - 2.2e-06 28.1 0.0 6.1e-06 26.7 0.0 1.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Yop-YscD_cpl PF16697.5 ORF11548 - 0.08 13.3 0.2 0.15 12.4 0.2 1.4 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain Y1_Tnp PF01797.16 ORF113163 - 0.00012 22.1 1.6 0.00068 19.7 1.6 1.9 1 1 0 1 1 1 1 Transposase IS200 like RexB PF15968.5 ORF113163 - 0.06 13.8 0.1 0.085 13.3 0.1 1.2 1 0 0 1 1 1 0 Membrane-anchored ion channel, Abi component DUF5100 PF17029.5 ORF11216 - 0.12 12.3 0.0 3.2 7.6 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF5100) zf-RING-like PF08746.11 ORF107680 - 0.23 11.8 1.7 0.46 10.8 1.7 1.4 1 0 0 1 1 1 0 RING-like domain O-ag_pol_Wzy PF14296.6 ORF107655 - 0.0079 14.9 5.1 0.11 11.1 1.7 2.2 1 1 1 2 2 2 2 O-antigen polysaccharide polymerase Wzy STE2 PF02116.15 ORF107655 - 0.026 13.8 5.9 0.034 13.5 5.9 1.2 1 0 0 1 1 1 0 Fungal pheromone mating factor STE2 GPCR DUF4427 PF14468.6 ORF106385 - 0.18 11.8 0.3 0.39 10.8 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4427) Pro_isomerase PF00160.21 ORF104803 - 5.8e-44 150.2 0.1 7.7e-44 149.7 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GST_C_3 PF14497.6 ORF103501 - 8.9e-16 57.9 0.9 1.3e-15 57.3 0.9 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF103501 - 3.1e-11 43.5 0.0 6.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF103501 - 2e-05 24.7 0.2 3.1e-05 24.1 0.2 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF103501 - 0.0065 15.8 0.0 0.0082 15.5 0.0 1.2 1 0 0 1 1 1 1 AIG1 family GST_C_2 PF13410.6 ORF103501 - 0.06 13.4 0.0 0.12 12.4 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF103501 - 0.088 13.2 0.0 0.21 12.0 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain 2OG-FeII_Oxy_3 PF13640.6 ORF10199 - 1.6e-12 48.1 0.1 2.5e-12 47.5 0.1 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF3024 PF11225.8 ORF10199 - 0.016 15.5 0.1 0.039 14.2 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3024) PRESAN PF09687.10 NODE_35044_length_616_cov_190.290878_g28057_i0reverse_frame_1 - 0.027 15.0 1.2 0.044 14.4 1.2 1.3 1 0 0 1 1 1 0 Plasmodium RESA N-terminal DA1-like PF12315.8 NODE_35026_length_617_cov_2.853952_g28040_i0reverse_frame_1 - 0.41 10.0 5.0 0.072 12.5 0.9 1.8 2 1 1 3 3 3 0 Protein DA1 Ank_2 PF12796.7 NODE_34974_length_618_cov_18.881647_g27991_i0reverse_frame_1 - 2.2e-17 63.4 0.0 6.9e-09 36.2 0.0 2.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_34974_length_618_cov_18.881647_g27991_i0reverse_frame_1 - 8.6e-14 51.7 1.0 3.2e-05 24.4 0.0 3.9 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_34974_length_618_cov_18.881647_g27991_i0reverse_frame_1 - 9.9e-10 37.8 0.0 0.38 11.5 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 NODE_34974_length_618_cov_18.881647_g27991_i0reverse_frame_1 - 1.1e-08 35.1 0.0 0.1 13.1 0.0 4.3 4 1 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 NODE_34974_length_618_cov_18.881647_g27991_i0reverse_frame_1 - 4.2e-06 26.9 0.0 0.072 13.4 0.0 3.4 1 1 2 3 3 3 3 Ankyrin repeats (many copies) POLO_box PF00659.18 NODE_34971_length_618_cov_58.428816_g27668_i1reverse_frame_1 - 1.9e-09 37.6 0.3 3.7e-09 36.7 0.1 1.6 2 0 0 2 2 2 1 POLO box duplicated region Ndufs5 PF10200.9 NODE_34971_length_618_cov_58.428816_g27668_i1reverse_frame_1 - 0.028 14.7 0.2 0.062 13.6 0.2 1.6 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa HEM4 PF02602.15 NODE_34963_length_618_cov_90.751286_g27981_i0reverse_frame_1 - 0.18 11.1 0.1 2 7.7 0.0 2.0 1 1 0 2 2 2 0 Uroporphyrinogen-III synthase HemD p47_phox_C PF08944.11 NODE_34963_length_618_cov_90.751286_g27981_i0reverse_frame_1 - 0.56 9.7 10.4 7.7 6.0 0.1 4.3 4 0 0 4 4 4 0 NADPH oxidase subunit p47Phox, C terminal domain RCC1_2 PF13540.6 NODE_34963_length_618_cov_90.751286_g27981_i0forward_frame_1 - 0.061 13.2 6.8 1.1 9.2 0.0 3.6 4 0 0 4 4 4 0 Regulator of chromosome condensation (RCC1) repeat AC_N PF16214.5 NODE_34938_length_618_cov_858.487136_g27962_i0reverse_frame_1 - 0.096 11.8 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region RecT PF03837.14 NODE_34926_length_619_cov_2.676370_g27952_i0forward_frame_3 - 0.065 12.7 0.0 0.085 12.3 0.0 1.2 1 0 0 1 1 1 0 RecT family Baculo_ODV-E27 PF05314.11 NODE_34926_length_619_cov_2.676370_g27952_i0forward_frame_2 - 0.1 11.7 0.1 0.16 11.2 0.1 1.2 1 0 0 1 1 1 0 Baculovirus occlusion-derived virus envelope protein EC27 TMEM247 PF15444.6 NODE_34910_length_619_cov_99.541096_g27936_i0forward_frame_2 - 0.082 12.9 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 PseudoU_synth_2 PF00849.22 NODE_34906_length_619_cov_130.214041_g27932_i0forward_frame_2 - 4.1e-12 46.5 0.0 5.9e-12 46.0 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF3392 PF11872.8 NODE_34858_length_620_cov_82.545299_g27890_i0reverse_frame_3 - 0.053 13.8 0.2 0.14 12.5 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3392) RCC1_2 PF13540.6 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_3 - 5.2e-46 153.6 29.6 7e-11 41.6 1.1 5.1 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_3 - 2.2e-12 47.4 34.4 2.2 9.0 0.1 9.7 8 2 1 9 9 9 7 Regulator of chromosome condensation (RCC1) repeat Paired_CXXCH_1 PF09699.10 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_3 - 3.8e-05 23.3 3.9 0.19 11.5 0.4 3.2 2 0 0 2 2 2 2 Doubled CXXCH motif (Paired_CXXCH_1) PQQ_3 PF13570.6 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_3 - 0.00027 21.3 6.4 15 6.2 0.1 5.1 5 0 0 5 5 5 1 PQQ-like domain DUF4333 PF14230.6 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_3 - 0.012 15.9 3.3 27 5.1 0.0 4.3 5 0 0 5 5 5 0 Domain of unknown function (DUF4333) Pdase_M17_N2 PF18295.1 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_3 - 0.02 15.2 1.0 1.1e+02 3.0 0.0 4.5 5 0 0 5 5 5 0 M17 aminopeptidase N-terminal domain 2 FAF PF11250.8 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_3 - 0.031 14.5 3.8 93 3.4 0.0 4.7 5 0 0 5 5 5 0 Fantastic Four meristem regulator DUF1786 PF08735.10 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_3 - 0.039 13.3 0.0 41 3.3 0.0 3.8 1 1 4 5 5 5 0 Putative pyruvate format-lyase activating enzyme (DUF1786) NPP1 PF05630.11 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_3 - 4.2 7.5 5.1 48 4.0 0.1 3.6 3 1 1 4 4 4 0 Necrosis inducing protein (NPP1) Ribosomal_L37ae PF01780.19 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_2 - 1.1e-05 25.5 2.0 22 5.2 0.0 5.4 5 1 0 5 5 5 2 Ribosomal L37ae protein family N-glycanase_N PF09112.10 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_2 - 0.73 9.6 9.0 27 4.5 0.1 4.3 3 2 2 5 5 5 0 Peptide-N-glycosidase F, N terminal Cyd_oper_YbgE PF09600.10 NODE_34847_length_620_cov_137.948718_g27880_i0reverse_frame_2 - 4.8 7.6 15.3 13 6.2 0.3 4.5 3 1 1 4 4 4 0 Cyd operon protein YbgE (Cyd_oper_YbgE) GTP_EFTU PF00009.27 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 8.6e-05 22.2 0.0 0.31 10.5 0.0 2.5 1 1 0 2 2 2 2 Elongation factor Tu GTP binding domain DUF968 PF06147.11 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.00059 20.1 0.4 13 5.9 0.0 3.3 2 1 1 3 3 3 1 Protein of unknown function (DUF968) DUF884 PF05959.11 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.00094 18.9 0.7 4.4 6.9 0.0 3.7 3 1 1 4 4 4 2 Nucleopolyhedrovirus protein of unknown function (DUF884) RNA_bind PF08675.11 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.0012 18.8 0.0 12 6.0 0.0 3.2 2 1 1 3 3 3 1 RNA binding domain DUF2990 PF11693.8 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.0066 16.6 0.0 76 3.6 0.0 4.5 3 1 2 5 5 5 0 Protein of unknown function (DUF2990) DUF4547 PF15080.6 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.013 15.1 0.7 5.2 6.7 0.1 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4547) DUF725 PF05267.12 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.016 15.2 0.6 37 4.3 0.0 4.1 1 1 3 4 4 4 0 Protein of unknown function (DUF725) Lebercilin PF15619.6 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.025 14.3 5.2 24 4.5 0.2 4.5 1 1 4 5 5 5 0 Ciliary protein causing Leber congenital amaurosis disease Peroxin-3 PF04882.12 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.091 11.7 0.1 5.6 5.8 0.0 2.1 2 0 0 2 2 2 0 Peroxin-3 Imm65 PF15582.6 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.12 11.2 9.5 4.4 6.1 0.1 4.2 1 1 4 5 5 5 0 Immunity protein 65 Replicase PF03090.17 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.14 12.0 9.2 30 4.5 0.1 4.4 3 1 2 5 5 5 0 Replicase family Glyoxalase PF00903.25 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 0.56 10.4 3.2 6 7.1 3.2 2.2 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCMA-Tall_bind PF09257.10 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_3 - 1.7 8.8 5.7 21 5.3 0.2 3.0 3 0 0 3 3 3 0 BCMA, TALL-1 binding Sulfotransfer_1 PF00685.27 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_2 - 0.00037 20.0 0.7 10 5.5 0.0 4.3 1 1 4 5 5 5 3 Sulfotransferase domain Requiem_N PF14051.6 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_2 - 0.02 15.1 4.4 3.3 8.0 0.3 2.8 2 2 0 2 2 2 0 N-terminal domain of DPF2/REQ. DUF4768 PF15989.5 NODE_34847_length_620_cov_137.948718_g27880_i0forward_frame_2 - 0.096 12.6 1.1 41 4.2 0.0 3.5 3 1 1 4 4 4 0 Domain of unknown function (DUF4768) Thioredoxin PF00085.20 NODE_34824_length_620_cov_12937.471795_g27859_i0reverse_frame_2 - 5.8e-23 80.8 0.0 8.6e-23 80.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 NODE_34824_length_620_cov_12937.471795_g27859_i0reverse_frame_2 - 0.0017 18.8 0.1 0.0033 17.8 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 NODE_34824_length_620_cov_12937.471795_g27859_i0reverse_frame_2 - 0.015 15.6 0.0 0.25 11.7 0.0 2.3 1 1 1 2 2 2 0 Thioredoxin-like OST3_OST6 PF04756.13 NODE_34824_length_620_cov_12937.471795_g27859_i0reverse_frame_2 - 0.046 13.1 0.0 0.064 12.6 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Redoxin PF08534.10 NODE_34824_length_620_cov_12937.471795_g27859_i0reverse_frame_2 - 0.06 13.1 0.2 0.15 11.8 0.1 1.6 1 1 1 2 2 2 0 Redoxin DUF3598 PF12204.8 NODE_34824_length_620_cov_12937.471795_g27859_i0forward_frame_2 - 0.03 13.8 0.1 0.04 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3598) DUF2285 PF10074.9 NODE_34811_length_621_cov_84.706485_g27848_i0forward_frame_3 - 0.031 14.9 0.4 0.055 14.1 0.4 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) Acyl-CoA_dh_1 PF00441.24 NODE_34788_length_621_cov_367.535836_g27825_i0forward_frame_2 - 8.3e-38 129.9 1.8 1e-37 129.7 1.8 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 NODE_34788_length_621_cov_367.535836_g27825_i0forward_frame_2 - 6.2e-12 45.9 2.9 8.1e-12 45.6 2.9 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Kinetochor_Ybp2 PF08568.10 ORF99435 - 0.00065 18.3 1.7 0.00094 17.8 1.7 1.3 1 0 0 1 1 1 1 Uncharacterised protein family, YAP/Alf4/glomulin YtxH PF12732.7 ORF99435 - 0.027 15.0 0.0 0.063 13.8 0.0 1.7 1 0 0 1 1 1 0 YtxH-like protein UCR_hinge PF02320.16 ORF99435 - 0.49 10.6 5.4 0.74 10.1 0.4 2.3 1 1 1 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein DUF1072 PF06380.11 ORF99435 - 2.5 8.1 6.8 2.9 7.8 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) AP2 PF00847.20 ORF98174 - 0.0026 18.0 0.1 0.0066 16.7 0.1 1.8 1 1 0 1 1 1 1 AP2 domain zinc-ribbons_6 PF07191.12 ORF95988 - 0.0063 16.5 5.1 0.013 15.5 5.1 1.5 1 0 0 1 1 1 1 zinc-ribbons DZR PF12773.7 ORF95988 - 0.67 10.0 5.9 4.1 7.5 2.7 2.9 2 1 0 2 2 2 0 Double zinc ribbon Herpes_U15 PF05613.11 ORF9407 - 0.058 14.1 0.5 0.058 14.1 0.5 1.6 2 0 0 2 2 2 0 Human herpesvirus U15 protein CAP_C PF08603.11 ORF93632 - 0.074 12.7 0.1 0.074 12.7 0.1 1.6 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) C terminal Peptidase_C70 PF12385.8 ORF93632 - 0.095 12.7 0.1 0.92 9.5 0.0 2.0 2 0 0 2 2 2 0 Papain-like cysteine protease AvrRpt2 COMM_domain PF07258.14 ORF93155 - 1.3e-07 31.6 0.9 2.9e-07 30.5 0.9 1.6 1 0 0 1 1 1 1 COMM domain CoaE PF01121.20 ORF93139 - 1.2e-77 259.6 0.3 1.6e-77 259.2 0.3 1.1 1 0 0 1 1 1 1 Dephospho-CoA kinase AAA_33 PF13671.6 ORF93139 - 9.1e-06 25.9 0.4 0.00014 22.1 0.4 2.3 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 ORF93139 - 3e-05 24.3 0.7 0.00031 21.0 0.7 2.3 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 ORF93139 - 5.6e-05 23.6 0.0 0.00025 21.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF93139 - 6.1e-05 23.6 0.1 0.0003 21.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 ORF93139 - 6.2e-05 23.2 1.4 0.32 11.1 0.4 2.5 1 1 1 2 2 2 2 Shikimate kinase Cytidylate_kin2 PF13189.6 ORF93139 - 0.0038 17.4 1.0 0.018 15.2 1.0 2.1 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_22 PF13401.6 ORF93139 - 0.0084 16.4 0.3 0.07 13.4 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF93139 - 0.014 15.1 0.2 0.025 14.3 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ACT PF01842.25 ORF93139 - 0.032 14.0 1.6 0.11 12.3 0.4 2.4 2 1 1 3 3 3 0 ACT domain Thymidylate_kin PF02223.17 ORF93139 - 0.032 13.9 0.1 0.72 9.5 0.0 2.3 2 0 0 2 2 2 0 Thymidylate kinase Dynamin_N PF00350.23 ORF93139 - 0.035 14.2 0.1 0.044 13.9 0.1 1.6 1 1 0 1 1 1 0 Dynamin family PRK PF00485.18 ORF93139 - 0.037 13.8 1.0 0.99 9.1 0.1 2.1 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family ATPase PF06745.13 ORF93139 - 0.061 12.7 0.3 0.62 9.4 0.0 2.0 2 0 0 2 2 2 0 KaiC ABC_tran PF00005.27 ORF93139 - 0.061 13.8 1.2 0.11 13.0 1.2 1.8 1 1 0 1 1 1 0 ABC transporter CobU PF02283.16 ORF93139 - 0.099 12.2 0.7 2.2 7.8 0.1 2.2 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase APS_kinase PF01583.20 ORF93139 - 0.11 12.4 0.1 0.37 10.7 0.0 1.9 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_5 PF07728.14 ORF93139 - 0.14 12.2 1.5 6.5 6.7 0.1 2.5 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF93139 - 0.14 12.5 3.1 0.87 9.9 3.1 2.1 1 1 0 1 1 1 0 AAA ATPase domain dNK PF01712.19 ORF93139 - 0.15 11.9 0.4 0.73 9.7 0.0 2.0 2 1 0 2 2 2 0 Deoxynucleoside kinase Proton_antipo_M PF00361.20 ORF91583 - 2.8e-32 112.1 7.7 2.8e-32 112.1 7.7 1.5 1 1 1 2 2 2 1 Proton-conducting membrane transporter EI24 PF07264.11 ORF91583 - 0.42 10.8 10.9 0.97 9.7 0.5 2.2 1 1 1 2 2 2 0 Etoposide-induced protein 2.4 (EI24) AP2 PF00847.20 ORF90573 - 0.0026 18.0 0.1 0.0066 16.7 0.1 1.8 1 1 0 1 1 1 1 AP2 domain DUF4633 PF15464.6 ORF88968 - 0.047 13.8 0.4 0.069 13.3 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4633) EB PF01683.18 ORF88968 - 0.56 10.5 5.8 0.17 12.2 2.3 2.0 2 0 0 2 2 2 0 EB module FtsX PF02687.21 ORF87489 - 5.7e-06 26.7 10.8 1.3e-05 25.6 3.8 2.2 2 0 0 2 2 2 2 FtsX-like permease family EI24 PF07264.11 ORF87489 - 0.032 14.5 1.6 0.039 14.2 1.6 1.2 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) Glycoprot_B_PH2 PF17417.2 ORF8639 - 0.12 12.8 0.3 0.12 12.8 0.3 2.5 2 1 1 3 3 3 0 Herpesvirus Glycoprotein B PH-like domain Remorin_C PF03763.13 ORF8639 - 6.6 6.7 11.5 6.7 6.6 4.7 2.2 2 0 0 2 2 2 0 Remorin, C-terminal region LysE PF01810.18 ORF8442 - 8.3e-58 195.0 10.9 9.5e-58 194.8 10.9 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 ORF8442 - 0.00019 21.1 5.7 0.0012 18.6 5.7 2.2 1 1 0 1 1 1 1 Integral membrane protein TerC family DUF808 PF05661.12 ORF8442 - 0.01 14.9 0.1 0.019 14.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF808) Nitrate_red_gam PF02665.14 ORF8442 - 0.17 11.4 8.8 0.02 14.5 3.7 1.8 1 1 0 2 2 2 0 Nitrate reductase gamma subunit FtsX PF02687.21 ORF83245 - 5.7e-06 26.7 10.8 1.3e-05 25.6 3.8 2.2 2 0 0 2 2 2 2 FtsX-like permease family EI24 PF07264.11 ORF83245 - 0.032 14.5 1.6 0.039 14.2 1.6 1.2 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) Ras PF00071.22 ORF83085 - 2.9e-62 209.0 1.1 3.4e-62 208.8 1.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF83085 - 4e-36 123.9 0.5 4e-36 123.9 0.5 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF83085 - 5.3e-21 74.8 0.1 6.9e-21 74.5 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF83085 - 2.4e-06 27.6 0.1 4.1e-06 26.9 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF83085 - 2.4e-06 27.1 0.4 2.9e-06 26.8 0.4 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF83085 - 2.3e-05 23.9 0.1 3.8e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF83085 - 3.1e-05 23.6 2.0 7.9e-05 22.3 0.5 2.2 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF83085 - 0.003 17.5 0.5 0.074 13.0 0.1 2.2 1 1 0 2 2 2 1 RsgA GTPase TniB PF05621.11 ORF83085 - 0.0084 15.5 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial TniB protein FeoB_N PF02421.18 ORF83085 - 0.013 15.1 0.1 0.18 11.4 0.1 2.0 1 1 0 1 1 1 0 Ferrous iron transport protein B SNF2_N PF00176.23 ORF83085 - 0.045 12.5 0.0 0.057 12.1 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain V-SNARE_C PF12352.8 ORF83046 - 7.9e-16 58.1 1.8 1.6e-15 57.1 1.8 1.6 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 ORF83046 - 0.0015 18.4 0.1 0.0025 17.7 0.1 1.4 1 1 0 1 1 1 1 Sec20 ORF6N PF10543.9 ORF83046 - 0.078 13.2 0.0 0.14 12.4 0.0 1.5 1 0 0 1 1 1 0 ORF6N domain SNARE PF05739.19 ORF83046 - 2.2 8.3 7.1 0.38 10.8 2.4 2.2 2 1 1 3 3 3 0 SNARE domain cNMP_binding PF00027.29 ORF80722 - 3.8e-18 65.3 0.0 5.3e-18 64.9 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain adh_short_C2 PF13561.6 ORF80005 - 3.9e-40 137.9 0.0 4.3e-40 137.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF80005 - 5.8e-30 104.2 0.0 7.4e-30 103.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Ras PF00071.22 ORF74832 - 1.4e-64 216.6 0.4 1.7e-64 216.3 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF74832 - 2.8e-36 124.4 0.3 5e-36 123.6 0.0 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF74832 - 2.1e-18 66.4 0.1 2.7e-18 66.0 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF74832 - 1.5e-06 27.9 0.3 1e-05 25.2 0.1 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF74832 - 2.8e-06 27.3 0.5 0.018 15.0 0.1 2.2 1 1 1 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 ORF74832 - 3.6e-06 26.5 0.1 4.6e-06 26.2 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF74832 - 1.4e-05 25.2 0.0 3.9e-05 23.7 0.0 1.6 1 1 1 2 2 2 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF74832 - 7.4e-05 22.2 0.1 0.0001 21.8 0.1 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit DAP3 PF10236.9 ORF74832 - 0.0089 15.2 0.0 0.6 9.2 0.0 2.1 2 0 0 2 2 2 1 Mitochondrial ribosomal death-associated protein 3 AAA_22 PF13401.6 ORF74832 - 0.021 15.1 0.0 0.081 13.2 0.0 2.0 1 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF74832 - 0.042 14.2 0.0 0.063 13.6 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 ORF74832 - 0.05 14.1 0.0 0.076 13.5 0.0 1.5 1 1 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 ORF74832 - 0.11 12.3 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain MVL PF12151.8 ORF72804 - 0.05 13.5 0.8 0.11 12.4 0.8 1.6 1 0 0 1 1 1 0 Mannan-binding protein Renin_r PF07850.14 ORF68778 - 0.16 12.6 6.8 1.4 9.6 0.3 2.6 1 1 1 2 2 2 0 Renin receptor-like protein PIG-U PF06728.13 ORF68778 - 0.67 8.9 28.7 31 3.5 28.7 2.2 1 1 0 1 1 1 0 GPI transamidase subunit PIG-U CrgA PF06781.12 ORF68778 - 1.8 8.7 5.1 7.6 6.7 0.4 2.7 2 1 0 2 2 2 0 Cell division protein CrgA FtsX PF02687.21 ORF67150 - 5.7e-06 26.7 10.8 1.3e-05 25.6 3.8 2.2 2 0 0 2 2 2 2 FtsX-like permease family EI24 PF07264.11 ORF67150 - 0.032 14.5 1.6 0.039 14.2 1.6 1.2 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) UPF0506 PF11703.8 ORF67121 - 3.4 8.1 12.4 0.32 11.4 7.3 1.9 2 0 0 2 2 2 0 UPF0506 DUF667 PF05018.13 ORF66652 - 2.2e-91 304.6 1.0 2.5e-91 304.4 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) Ribosomal_L17 PF01196.19 ORF64465 - 0.045 14.6 0.0 0.072 14.0 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L17 Rap1a PF18602.1 ORF64465 - 0.054 13.8 0.1 0.11 12.8 0.1 1.5 1 0 0 1 1 1 0 Rap1a immunity proteins DUF4229 PF14012.6 ORF586 - 0.003 17.6 1.0 0.003 17.6 1.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF4229) Arteri_Gl PF00951.18 ORF586 - 5.2 6.8 9.4 5.3 6.8 8.1 1.6 1 1 1 2 2 2 0 Arterivirus GL envelope glycoprotein Ribosomal_S9 PF00380.19 ORF57842 - 3.2e-31 108.4 0.7 4.6e-31 107.9 0.7 1.2 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Methyltransf_2 PF00891.18 ORF57842 - 0.16 11.2 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain Antimicrobial_3 PF08025.11 ORF57842 - 0.25 11.3 0.3 0.25 11.3 0.3 2.1 2 0 0 2 2 2 0 Spider antimicrobial peptide MOSC PF03473.17 ORF54033 - 2.8e-18 66.2 0.0 3.7e-18 65.8 0.0 1.2 1 0 0 1 1 1 1 MOSC domain DUF840 PF05801.11 ORF54033 - 0.13 12.3 0.0 1.3 9.1 0.0 2.2 1 1 0 1 1 1 0 Lagovirus protein of unknown function (DUF840) S_4TM PF18159.1 ORF52662 - 0.1 11.9 0.4 0.15 11.4 0.4 1.2 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF2062 PF09835.9 ORF5223 - 0.031 14.1 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) zf-HC5HC2H PF13771.6 ORF49715 - 0.11 12.8 5.9 0.2 11.9 5.9 1.6 1 0 0 1 1 1 0 PHD-like zinc-binding domain RNA_pol_N PF01194.17 ORF49715 - 0.27 11.6 5.0 1.3 9.4 0.0 3.0 3 0 0 3 3 3 0 RNA polymerases N / 8 kDa subunit Ras PF00071.22 ORF49126 - 4.1e-37 127.3 2.6 4.9e-37 127.0 2.6 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF49126 - 9.9e-20 71.0 1.0 1.8e-19 70.1 1.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF49126 - 3.5e-17 62.4 0.5 4.1e-17 62.2 0.5 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF49126 - 3.3e-05 23.5 2.2 0.00071 19.2 0.3 2.4 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain PRORP PF16953.5 ORF49126 - 0.00019 21.1 0.1 0.00022 20.8 0.1 1.3 1 0 0 1 1 1 1 Protein-only RNase P Gtr1_RagA PF04670.12 ORF49126 - 0.012 15.0 0.6 0.014 14.8 0.6 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region G-alpha PF00503.20 ORF49126 - 0.032 13.4 1.5 3.4 6.7 0.1 2.2 1 1 1 2 2 2 0 G-protein alpha subunit NtA PF03146.15 ORF49043 - 0.045 13.6 0.0 0.14 12.0 0.0 1.8 2 0 0 2 2 2 0 Agrin NtA domain DUF2062 PF09835.9 ORF4876 - 0.031 14.1 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Rab5-bind PF09311.11 ORF48270 - 0.016 14.6 4.2 0.024 14.0 4.2 1.3 1 0 0 1 1 1 0 Rabaptin-like protein DUF3450 PF11932.8 ORF48270 - 0.029 13.7 7.0 0.056 12.7 2.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) FmiP_Thoc5 PF09766.9 ORF48270 - 0.043 13.1 2.2 0.055 12.8 2.2 1.3 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 OmpH PF03938.14 ORF48270 - 0.044 14.1 4.3 0.35 11.2 4.2 2.1 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Thioredoxin_13 PF18401.1 ORF48270 - 0.074 13.0 1.3 0.14 12.0 0.8 1.6 1 1 1 2 2 2 0 Thioredoxin-like domain DUF16 PF01519.16 ORF48270 - 0.15 12.6 1.0 0.25 11.8 0.1 1.8 2 1 0 2 2 2 0 Protein of unknown function DUF16 DLP_helical PF18709.1 ORF48270 - 0.23 10.6 3.4 0.07 12.3 0.6 1.5 2 0 0 2 2 2 0 Dynamin-like helical domain DUF4472 PF14739.6 ORF48270 - 0.35 11.6 7.5 0.3 11.9 1.5 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4472) Flg_hook PF02120.16 ORF48270 - 0.68 9.9 8.9 0.31 11.0 1.9 3.3 2 2 1 3 3 3 0 Flagellar hook-length control protein FliK Golgin_A5 PF09787.9 ORF48270 - 2.3 7.6 10.1 0.35 10.3 4.5 1.9 1 1 0 1 1 1 0 Golgin subfamily A member 5 T2SSF PF00482.23 ORF48270 - 3.6 7.6 6.2 1.8 8.5 3.3 2.1 2 2 0 2 2 2 0 Type II secretion system (T2SS), protein F Exonuc_VII_L PF02601.15 ORF48270 - 4.5 6.7 7.9 11 5.5 7.9 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF2524 PF10732.9 ORF48270 - 4.9 7.5 9.1 0.37 11.1 2.6 2.5 3 1 1 4 4 4 0 Protein of unknown function (DUF2524) Cys_rich_FGFR PF00839.17 ORF45671 - 0.051 13.8 0.0 0.12 12.5 0.0 1.6 1 1 0 1 1 1 0 Cysteine rich repeat UPF0731 PF14982.6 ORF45058 - 0.12 12.6 5.5 0.1 12.8 3.3 2.1 2 0 0 2 2 2 0 UPF0731 family DUF2062 PF09835.9 ORF43835 - 0.031 14.1 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) DUF782 PF05614.11 ORF41932 - 0.063 13.7 0.1 0.12 12.8 0.1 1.5 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) DUF2062 PF09835.9 ORF41073 - 0.031 14.1 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) AA_permease_2 PF13520.6 ORF3964 - 1.6e-09 37.1 12.3 3.1e-09 36.2 11.9 1.6 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.21 ORF3964 - 2.7e-07 29.5 7.7 3e-07 29.4 7.7 1.2 1 0 0 1 1 1 1 Amino acid permease DUF3043 PF11241.8 ORF3964 - 0.88 9.6 4.2 0.57 10.2 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3043) Glycoprotein_G PF00802.19 ORF39117 - 0.03 13.7 1.2 0.048 13.0 1.2 1.3 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G zinc-ribbons_6 PF07191.12 ORF35812 - 0.0063 16.5 5.1 0.013 15.5 5.1 1.5 1 0 0 1 1 1 1 zinc-ribbons DZR PF12773.7 ORF35812 - 0.67 10.0 5.9 4.1 7.5 2.7 2.9 2 1 0 2 2 2 0 Double zinc ribbon TMEM251 PF15190.6 ORF35595 - 0.036 14.0 1.0 3.6 7.5 0.3 2.1 1 1 1 2 2 2 0 Transmembrane protein 251 Pyr_redox_2 PF07992.14 ORF31950 - 1.2e-15 57.6 0.4 1.5e-15 57.3 0.4 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 ORF31950 - 2.5e-06 27.9 0.0 6.4e-06 26.6 0.0 1.7 2 0 0 2 2 2 1 Reductase C-terminal Myb_DNA-binding PF00249.31 ORF26802 - 2e-11 43.9 0.8 3.6e-11 43.1 0.7 1.5 1 1 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF26802 - 0.0001 22.1 0.4 0.00019 21.3 0.4 1.5 1 0 0 1 1 1 1 Myb DNA-binding like Myb_DNA-bind_6 PF13921.6 ORF26802 - 0.0036 17.5 0.2 0.0065 16.7 0.2 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Lysis_col PF02402.16 ORF26802 - 0.22 11.2 0.4 1.7 8.4 0.1 2.3 2 0 0 2 2 2 0 Lysis protein Glutaredoxin PF00462.24 ORF25188 - 6.2e-39 132.0 0.0 6.2e-19 68.0 0.0 2.5 2 0 0 2 2 2 2 Glutaredoxin SH3BGR PF04908.15 ORF25188 - 1e-06 28.8 0.0 0.043 14.0 0.1 2.5 2 1 0 2 2 2 2 SH3-binding, glutamic acid-rich protein RdRP PF05183.12 ORF25188 - 0.0022 16.7 0.0 0.014 14.1 0.0 1.9 1 1 0 1 1 1 1 RNA dependent RNA polymerase GST_N_3 PF13417.6 ORF25188 - 0.023 15.1 0.0 8.2 6.9 0.0 2.2 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain CxxCxxCC PF03692.15 ORF23401 - 6e-08 33.3 10.3 6e-08 33.3 10.3 2.0 2 0 0 2 2 2 1 Putative zinc- or iron-chelating domain CusF_Ec PF11604.8 ORF23401 - 0.12 12.4 0.0 1 9.4 0.0 2.1 2 0 0 2 2 2 0 Copper binding periplasmic protein CusF DUF2062 PF09835.9 ORF23307 - 0.031 14.1 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) EamA PF00892.20 ORF23185 - 1.1e-13 51.5 23.1 7e-07 29.5 11.6 2.1 2 0 0 2 2 2 2 EamA-like transporter family PAP2 PF01569.21 ORF21641 - 1.5e-08 34.5 14.0 2.2e-08 33.9 8.9 2.4 2 1 0 2 2 2 1 PAP2 superfamily DUF212 PF02681.14 ORF21641 - 0.19 11.9 0.0 5.7 7.1 0.0 2.2 1 1 1 2 2 2 0 Divergent PAP2 family DUF2953 PF11167.8 ORF21641 - 1 9.5 5.2 46 4.2 3.0 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2953) DUF1283 PF06932.11 ORF20939 - 0.041 14.1 0.0 0.08 13.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) Ku_PK_bind PF08785.11 ORF18787 - 0.017 15.3 0.2 0.027 14.6 0.2 1.5 1 0 0 1 1 1 0 Ku C terminal domain like Ras PF00071.22 ORF18592 - 4.1e-37 127.3 2.6 4.9e-37 127.0 2.6 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF18592 - 9.9e-20 71.0 1.0 1.8e-19 70.1 1.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF18592 - 3.5e-17 62.4 0.5 4.1e-17 62.2 0.5 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF18592 - 3.3e-05 23.5 2.2 0.00071 19.2 0.3 2.4 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain PRORP PF16953.5 ORF18592 - 0.00019 21.1 0.1 0.00022 20.8 0.1 1.3 1 0 0 1 1 1 1 Protein-only RNase P Gtr1_RagA PF04670.12 ORF18592 - 0.012 15.0 0.6 0.014 14.8 0.6 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region G-alpha PF00503.20 ORF18592 - 0.032 13.4 1.5 3.4 6.7 0.1 2.2 1 1 1 2 2 2 0 G-protein alpha subunit DUF2062 PF09835.9 ORF18311 - 0.031 14.1 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Pkinase PF00069.25 ORF17535 - 4e-10 39.5 0.0 1.2e-09 38.0 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain EamA PF00892.20 ORF15752 - 1.1e-13 51.5 23.1 7e-07 29.5 11.6 2.1 2 0 0 2 2 2 2 EamA-like transporter family Ank_2 PF12796.7 ORF151548 - 1.8e-48 163.0 1.5 5.7e-14 52.5 0.0 3.1 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF151548 - 7.9e-26 90.1 0.1 4.9e-09 36.6 0.0 4.2 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF151548 - 1.2e-23 80.6 0.1 0.00032 20.9 0.0 5.9 7 0 0 7 7 7 4 Ankyrin repeat Ank_5 PF13857.6 ORF151548 - 8.7e-23 80.1 1.2 1.8e-07 31.3 0.1 5.3 1 1 5 6 6 6 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF151548 - 7.9e-19 67.2 0.4 0.0023 18.3 0.0 5.8 6 0 0 6 6 6 4 Ankyrin repeat EF-hand_6 PF13405.6 ORF151541 - 0.0002 21.0 0.0 0.00078 19.2 0.0 2.1 1 1 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF151541 - 0.0052 16.3 0.0 0.016 14.7 0.0 1.9 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 ORF151541 - 0.018 14.5 0.1 0.04 13.4 0.1 1.5 1 0 0 1 1 1 0 EF hand SpoIIE PF07228.12 ORF149468 - 0.0004 20.4 0.0 0.00074 19.5 0.0 1.5 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) CAP_C PF08603.11 ORF145267 - 0.074 12.7 0.1 0.074 12.7 0.1 1.6 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) C terminal Peptidase_C70 PF12385.8 ORF145267 - 0.095 12.7 0.1 0.92 9.5 0.0 2.0 2 0 0 2 2 2 0 Papain-like cysteine protease AvrRpt2 zinc-ribbons_6 PF07191.12 ORF144660 - 0.0063 16.5 5.1 0.013 15.5 5.1 1.5 1 0 0 1 1 1 1 zinc-ribbons DZR PF12773.7 ORF144660 - 0.67 10.0 5.9 4.1 7.5 2.7 2.9 2 1 0 2 2 2 0 Double zinc ribbon Hid1 PF12722.7 ORF144257 - 9.2 4.2 12.8 9.9 4.1 12.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF5100 PF17029.5 ORF142850 - 0.085 12.7 0.0 2.1 8.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5100) DUF4100 PF13352.6 ORF139428 - 0.012 15.4 0.1 0.017 14.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) ADH_zinc_N_2 PF13602.6 ORF139189 - 9.2e-07 30.0 0.1 1.6e-06 29.2 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Tetraspanin PF00335.20 ORF138745 - 0.072 12.8 0.2 0.086 12.5 0.2 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF4644 PF15486.6 ORF13785 - 0.066 13.0 3.4 0.058 13.2 1.5 1.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4644) Ribosomal_S4 PF00163.19 ORF136937 - 1.2e-32 112.6 3.0 1.8e-32 112.1 2.1 1.7 2 0 0 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain S4 PF01479.25 ORF136937 - 4.7e-19 67.8 0.2 9.7e-19 66.8 0.2 1.6 1 0 0 1 1 1 1 S4 domain S4_2 PF13275.6 ORF136937 - 0.01 15.6 0.1 0.021 14.6 0.1 1.5 1 0 0 1 1 1 0 S4 domain TyrRSs_C PF16714.5 ORF136937 - 0.11 12.4 0.1 0.22 11.4 0.1 1.5 1 0 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain Hox9_act PF04617.13 ORF135649 - 0.034 14.9 0.0 0.057 14.2 0.0 1.4 1 0 0 1 1 1 0 Hox9 activation region BTB PF00651.31 ORF135510 - 6.3e-18 65.0 4.9 7.8e-18 64.7 0.7 2.5 1 1 1 2 2 2 1 BTB/POZ domain MA3 PF02847.17 ORF135510 - 0.072 13.1 0.3 0.73 9.8 0.1 2.2 2 0 0 2 2 2 0 MA3 domain zf-Nse PF11789.8 ORF133237 - 0.057 13.2 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit EF-hand_7 PF13499.6 ORF132726 - 4.3e-11 43.1 0.7 4.3e-11 43.1 0.7 2.8 3 1 0 3 3 3 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF132726 - 1.6e-09 36.6 0.1 7.1e-07 28.3 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF132726 - 1.1e-08 34.3 0.4 2.3e-05 24.0 0.1 3.1 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF132726 - 4.6e-05 22.7 0.2 0.00015 21.1 0.2 2.0 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF132726 - 0.00046 20.0 0.8 0.0032 17.3 0.1 2.7 2 2 1 3 3 3 1 EF-hand domain pair U79_P34 PF03064.16 ORF132726 - 0.0014 18.1 0.9 0.0021 17.5 0.1 1.7 1 1 0 1 1 1 1 HSV U79 / HCMV P34 GAGA_bind PF06217.12 ORF132726 - 0.35 11.1 3.8 0.43 10.8 3.8 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family SPARC_Ca_bdg PF10591.9 ORF132726 - 1.9 8.8 9.6 0.16 12.3 3.9 2.1 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region tRNA-synt_1e PF01406.19 ORF129260 - 0.0012 18.2 0.8 0.0016 17.8 0.8 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain BLOC1_2 PF10046.9 ORF129260 - 0.012 15.9 1.6 0.012 15.9 1.6 1.8 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 LMBR1 PF04791.16 ORF129260 - 5.3 5.8 6.0 6.9 5.5 6.0 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein zf-CCHC PF00098.23 ORF128623 - 4.8e-09 35.9 1.8 8.1e-09 35.2 1.8 1.4 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_3 PF13917.6 ORF128623 - 0.0031 17.4 0.2 0.0049 16.8 0.2 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 ORF128623 - 0.022 14.6 0.2 0.033 14.0 0.2 1.3 1 0 0 1 1 1 0 Zinc knuckle PDZ_6 PF17820.1 ORF128047 - 1.1e-05 25.1 0.1 0.12 12.3 0.0 2.4 2 1 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF128047 - 0.0011 19.2 0.3 3.1 8.2 0.0 2.8 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF128047 - 0.029 14.7 0.0 2.9 8.3 0.0 2.4 2 0 0 2 2 2 0 PDZ domain Myb_DNA-binding PF00249.31 ORF127499 - 2e-11 43.9 0.8 3.6e-11 43.1 0.7 1.5 1 1 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF127499 - 0.0001 22.1 0.4 0.00019 21.3 0.4 1.5 1 0 0 1 1 1 1 Myb DNA-binding like Myb_DNA-bind_6 PF13921.6 ORF127499 - 0.0036 17.5 0.2 0.0065 16.7 0.2 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Lysis_col PF02402.16 ORF127499 - 0.22 11.2 0.4 1.7 8.4 0.1 2.3 2 0 0 2 2 2 0 Lysis protein SH3_11 PF18103.1 ORF127385 - 0.017 15.3 0.2 0.057 13.6 0.2 1.9 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain FKBP_C PF00254.28 ORF126429 - 2e-28 98.5 0.0 3.7e-28 97.7 0.0 1.4 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_N PF01346.18 ORF126429 - 4.5e-20 72.4 0.0 5.6e-20 72.1 0.0 1.1 1 0 0 1 1 1 1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Ribosomal_L17 PF01196.19 ORF126144 - 0.045 14.6 0.0 0.072 14.0 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L17 Rap1a PF18602.1 ORF126144 - 0.054 13.8 0.1 0.11 12.8 0.1 1.5 1 0 0 1 1 1 0 Rap1a immunity proteins U71 PF17474.2 ORF12533 - 0.049 13.6 0.5 0.15 12.0 0.5 1.8 1 0 0 1 1 1 0 Tegument protein UL11 homolog RE_ScaI PF09569.10 ORF125078 - 0.026 14.2 3.7 0.03 14.0 3.7 1.2 1 0 0 1 1 1 0 ScaI restriction endonuclease DUF2062 PF09835.9 ORF124054 - 0.031 14.1 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) HemY_N PF07219.13 ORF123818 - 0.44 10.8 0.1 0.44 10.8 0.1 2.1 2 0 0 2 2 2 0 HemY protein N-terminus FtsX PF02687.21 ORF123711 - 5.7e-06 26.7 10.8 1.3e-05 25.6 3.8 2.2 2 0 0 2 2 2 2 FtsX-like permease family EI24 PF07264.11 ORF123711 - 0.032 14.5 1.6 0.039 14.2 1.6 1.2 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) zinc-ribbons_6 PF07191.12 ORF120047 - 0.0063 16.5 5.1 0.013 15.5 5.1 1.5 1 0 0 1 1 1 1 zinc-ribbons DZR PF12773.7 ORF120047 - 0.67 10.0 5.9 4.1 7.5 2.7 2.9 2 1 0 2 2 2 0 Double zinc ribbon DUF2062 PF09835.9 ORF119908 - 0.031 14.1 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Arginase PF00491.21 ORF117382 - 2.9e-66 223.8 0.5 3.5e-66 223.6 0.5 1.0 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.7 ORF117382 - 0.088 13.0 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 UPF0489 domain Spectrin PF00435.21 ORF117369 - 0.0038 17.7 14.8 0.0044 17.5 5.9 3.1 1 1 1 2 2 2 1 Spectrin repeat PRKG1_interact PF15898.5 ORF117369 - 0.0047 17.8 14.9 0.0047 17.8 14.9 2.5 2 1 1 3 3 3 1 cGMP-dependent protein kinase interacting domain SlyX PF04102.12 ORF117369 - 0.0057 17.2 4.8 1.5 9.5 1.3 3.9 2 1 1 3 3 3 1 SlyX Fib_alpha PF08702.10 ORF117369 - 0.009 16.2 17.4 0.097 12.9 5.3 2.8 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family GAS PF13851.6 ORF117369 - 0.028 13.8 28.6 0.065 12.6 22.6 3.2 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Rootletin PF15035.6 ORF117369 - 0.031 14.3 18.0 1.9 8.5 18.0 2.1 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Phage_GP20 PF06810.11 ORF117369 - 0.049 13.4 24.0 0.18 11.6 15.3 3.2 1 1 2 3 3 3 0 Phage minor structural protein GP20 UPF0515 PF15135.6 ORF117369 - 0.052 12.9 6.0 0.068 12.5 6.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 HsbA PF12296.8 ORF117369 - 0.065 13.7 4.2 0.26 11.7 2.8 2.3 1 1 1 2 2 2 0 Hydrophobic surface binding protein A EzrA PF06160.12 ORF117369 - 0.11 10.6 22.8 0.045 11.9 19.8 1.7 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA DASH_Dam1 PF08653.10 ORF117369 - 0.12 12.2 4.5 1.7 8.5 0.7 3.0 3 1 0 3 3 2 0 DASH complex subunit Dam1 Macoilin PF09726.9 ORF117369 - 0.14 10.7 22.7 0.5 8.9 22.7 1.7 1 1 0 1 1 1 0 Macoilin family Snapin_Pallidin PF14712.6 ORF117369 - 0.22 12.0 15.3 0.41 11.1 3.4 3.7 2 1 3 5 5 5 0 Snapin/Pallidin Seryl_tRNA_N PF02403.22 ORF117369 - 0.22 11.7 21.6 0.29 11.4 13.7 3.4 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain OmpH PF03938.14 ORF117369 - 0.26 11.6 24.6 0.29 11.5 5.0 3.1 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) DUF3450 PF11932.8 ORF117369 - 0.26 10.6 16.6 0.26 10.5 2.8 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) DUF1140 PF06600.11 ORF117369 - 0.27 11.7 7.0 0.45 11.0 6.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1140) NPV_P10 PF05531.12 ORF117369 - 0.45 11.0 5.7 1.8 9.1 2.2 2.8 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Uteroglobin PF01099.17 ORF117369 - 0.6 10.5 10.5 0.11 12.9 1.3 3.3 3 1 1 4 4 4 0 Uteroglobin family Yuri_gagarin PF15934.5 ORF117369 - 0.61 9.9 16.9 3.5 7.4 5.0 2.5 1 1 1 2 2 2 0 Yuri gagarin Tropomyosin_1 PF12718.7 ORF117369 - 0.64 10.2 27.9 0.18 11.9 22.1 2.5 1 1 2 3 3 3 0 Tropomyosin like FlaC_arch PF05377.11 ORF117369 - 0.7 10.3 13.7 13 6.3 2.2 4.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Lectin_N PF03954.14 ORF117369 - 1.4 8.7 9.3 1.5 8.6 3.4 2.8 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Syntaxin-6_N PF09177.11 ORF117369 - 1.4 9.5 13.8 19 5.9 0.1 3.4 1 1 2 3 3 3 0 Syntaxin 6, N-terminal TMF_DNA_bd PF12329.8 ORF117369 - 1.9 8.5 29.0 1.6 8.7 6.6 4.8 2 1 3 5 5 5 0 TATA element modulatory factor 1 DNA binding DUF4164 PF13747.6 ORF117369 - 2 8.7 11.6 0.29 11.4 4.1 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) Exonuc_VII_L PF02601.15 ORF117369 - 2.3 7.7 15.1 3.7 7.0 15.1 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF5320 PF17253.2 ORF117369 - 2.7 9.1 7.2 8.1 7.6 5.2 2.8 2 1 0 2 2 2 0 Family of unknown function (DUF5320) DNA_ligase_A_C PF04679.15 ORF117369 - 3 8.5 5.1 97 3.7 0.4 3.2 1 1 2 3 3 3 0 ATP dependent DNA ligase C terminal region Allexi_40kDa PF05549.11 ORF117369 - 3.5 7.0 7.9 4.6 6.7 6.8 1.8 1 1 0 1 1 1 0 Allexivirus 40kDa protein USP8_interact PF08941.10 ORF117369 - 4.3 7.1 8.0 2.5 7.9 5.2 1.9 2 1 0 2 2 2 0 USP8 interacting DUF4140 PF13600.6 ORF117369 - 4.3 7.8 12.0 94 3.5 6.0 3.9 2 1 1 3 3 3 0 N-terminal domain of unknown function (DUF4140) APG6_N PF17675.1 ORF117369 - 5.4 7.5 28.7 0.37 11.3 17.1 3.0 1 1 2 3 3 3 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF117369 - 7.1 4.4 14.1 9 4.1 14.0 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family FapA PF03961.13 ORF117369 - 9.9 4.6 22.9 58 2.1 22.2 2.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A DSPc PF00782.20 ORF11624 - 2.7e-29 101.6 0.0 4.6e-29 100.9 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF11624 - 0.00014 21.5 0.0 0.00019 21.1 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 ORF11624 - 0.012 15.6 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family zf-AD PF07776.15 ORF11624 - 6.1 7.2 7.6 0.96 9.7 1.7 2.5 3 0 0 3 3 3 0 Zinc-finger associated domain (zf-AD) ROK PF00480.20 ORF114948 - 9.4e-35 120.5 0.5 1.1e-34 120.3 0.5 1.0 1 0 0 1 1 1 1 ROK family Methyltransf_25 PF13649.6 ORF113430 - 2.9e-09 37.5 0.0 7.8e-09 36.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF113430 - 3e-08 34.2 0.1 2.7e-07 31.2 0.1 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF113430 - 2.3e-07 30.7 0.0 3.1e-07 30.3 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF113430 - 5.8e-06 26.2 0.0 9.4e-06 25.6 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF113430 - 0.00044 20.9 0.0 0.00069 20.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF113430 - 0.00089 19.1 0.0 0.0013 18.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 ORF113430 - 0.02 14.2 0.0 0.028 13.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MTS PF05175.14 ORF113430 - 0.2 11.2 0.0 0.51 9.9 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase small domain Protocadherin PF08374.11 ORF112628 - 0.092 12.7 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Protocadherin DUF1834 PF08873.11 ORF11157 - 0.038 13.7 0.0 0.067 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1834) Xrn1_D3 PF18194.1 ORF11157 - 0.11 12.6 0.1 0.19 11.8 0.1 1.3 1 0 0 1 1 1 0 Exoribonuclease 1 Domain-3 DUF2062 PF09835.9 ORF110594 - 0.031 14.1 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Glyoxalase_3 PF13468.6 ORF110219 - 4.1e-22 79.1 0.0 4.9e-22 78.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain PQQ PF01011.21 ORF109603 - 0.00012 21.8 0.1 0.014 15.3 0.0 2.9 3 0 0 3 3 3 1 PQQ enzyme repeat PQQ_3 PF13570.6 ORF109603 - 0.00052 20.4 0.5 0.81 10.3 0.0 3.7 4 0 0 4 4 4 1 PQQ-like domain PQQ_2 PF13360.6 ORF109603 - 0.012 15.2 0.0 0.09 12.3 0.0 2.0 1 1 0 1 1 1 0 PQQ-like domain DUF5508 PF17621.2 ORF109603 - 0.017 14.3 0.0 0.026 13.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5508) Smr PF01713.21 ORF108948 - 0.00039 20.7 0.4 0.00073 19.8 0.4 1.4 1 0 0 1 1 1 1 Smr domain BRCT_2 PF16589.5 ORF106706 - 0.044 14.2 0.0 0.093 13.2 0.0 1.6 1 0 0 1 1 1 0 BRCT domain, a BRCA1 C-terminus domain DUF4337 PF14235.6 ORF105834 - 9.6 6.3 7.8 5.1 7.2 4.9 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) Sugar_tr PF00083.24 ORF104241 - 1.2e-20 73.8 4.5 1.7e-20 73.4 4.5 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF104241 - 0.75 8.6 16.1 5.3 5.9 16.1 2.5 1 1 0 1 1 1 0 Major Facilitator Superfamily DUF3792 PF12670.7 ORF104241 - 3.9 7.7 12.4 20 5.4 11.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3792) SecD-TM1 PF13721.6 ORF103792 - 8.7 6.9 8.4 6.6 7.3 0.8 2.7 2 1 1 3 3 3 0 SecD export protein N-terminal TM region EMP24_GP25L PF01105.24 ORF103578 - 2e-23 83.3 1.3 2.4e-23 83.0 1.3 1.1 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD HSDR_N_2 PF13588.6 ORF103578 - 0.069 13.2 0.7 0.14 12.1 0.7 1.5 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) ABC2_membrane_3 PF12698.7 ORF103578 - 0.091 11.8 2.1 0.041 13.0 0.3 1.5 2 0 0 2 2 2 0 ABC-2 family transporter protein zinc-ribbons_6 PF07191.12 ORF102486 - 0.0063 16.5 5.1 0.013 15.5 5.1 1.5 1 0 0 1 1 1 1 zinc-ribbons DZR PF12773.7 ORF102486 - 0.67 10.0 5.9 4.1 7.5 2.7 2.9 2 1 0 2 2 2 0 Double zinc ribbon YjbF PF11102.8 ORF101785 - 6.7e-64 215.1 2.1 7.5e-64 215.0 2.1 1.0 1 0 0 1 1 1 1 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF RTT107_BRCT_5 PF16770.5 ORF100255 - 1.6e-06 27.9 0.0 2.3e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Regulator of Ty1 transposition protein 107 BRCT domain BRCT_2 PF16589.5 ORF100255 - 0.00082 19.7 0.0 0.087 13.3 0.0 2.2 2 0 0 2 2 2 2 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 ORF100255 - 0.027 14.8 0.0 0.068 13.6 0.0 1.7 2 0 0 2 2 2 0 BRCA1 C Terminus (BRCT) domain AAA_12 PF13087.6 NODE_35229_length_613_cov_2.240484_g28222_i0reverse_frame_1 - 8.3e-28 97.4 0.0 1.2e-27 96.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 NODE_35229_length_613_cov_2.240484_g28222_i0reverse_frame_1 - 0.0031 17.4 0.1 0.0046 16.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain TFIIF_alpha PF05793.12 NODE_35224_length_613_cov_54.548443_g28217_i0reverse_frame_1 - 2.3 6.7 40.7 2.8 6.4 40.7 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) ETRAMP PF09716.10 NODE_35218_length_613_cov_69.617647_g28211_i0reverse_frame_1 - 0.054 13.6 4.1 0.11 12.6 4.1 1.5 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks112.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks112.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks112.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks112.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:00:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_S11 PF00411.19 NODE_35188_length_613_cov_923.242215_g28183_i0reverse_frame_1 - 0.012 16.0 0.1 0.071 13.5 0.1 2.1 1 1 0 1 1 1 0 Ribosomal protein S11 RVT_3 PF13456.6 NODE_35188_length_613_cov_923.242215_g28183_i0reverse_frame_1 - 0.08 12.8 0.0 0.17 11.7 0.0 1.6 1 0 0 1 1 1 0 Reverse transcriptase-like Herpes_glycoH_C PF17488.2 NODE_35160_length_614_cov_87.278066_g28158_i0reverse_frame_1 - 0.48 10.2 3.9 0.77 9.5 0.4 2.2 2 0 0 2 2 2 0 Herpesvirus glycoprotein H C-terminal domain DPM3 PF08285.11 NODE_35158_length_614_cov_88.371330_g28156_i0reverse_frame_1 - 2.2 8.5 7.8 9.4 6.5 7.8 2.1 1 1 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF2556 PF10831.8 NODE_35158_length_614_cov_88.371330_g28156_i0forward_frame_1 - 0.1 12.6 0.5 0.19 11.7 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2556) Ribosomal_L37e PF01907.19 NODE_35153_length_614_cov_99.151986_g28151_i0forward_frame_1 - 2.6e-25 88.4 8.7 4.9e-25 87.4 8.7 1.5 1 0 0 1 1 1 1 Ribosomal protein L37e ubiquitin PF00240.23 NODE_35153_length_614_cov_99.151986_g28151_i0forward_frame_1 - 1.9e-07 30.7 0.0 9.4e-07 28.5 0.0 2.0 1 1 0 1 1 1 1 Ubiquitin family zf-ribbon_3 PF13248.6 NODE_35153_length_614_cov_99.151986_g28151_i0forward_frame_1 - 0.017 14.5 3.0 0.017 14.5 3.0 1.8 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.7 NODE_35153_length_614_cov_99.151986_g28151_i0forward_frame_1 - 0.028 14.4 1.5 0.066 13.3 1.5 1.6 1 0 0 1 1 1 0 Double zinc ribbon zf-NADH-PPase PF09297.11 NODE_35153_length_614_cov_99.151986_g28151_i0forward_frame_1 - 0.097 12.4 4.5 1.8 8.3 4.9 2.4 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain HypA PF01155.19 NODE_35153_length_614_cov_99.151986_g28151_i0forward_frame_1 - 0.12 12.4 0.2 0.19 11.8 0.2 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 2Fe-2S_Ferredox PF11591.8 NODE_35108_length_615_cov_103.739655_g28113_i0forward_frame_1 - 9.6 6.2 9.6 4.9 7.1 0.2 3.5 3 0 0 3 3 3 0 Ferredoxin chloroplastic transit peptide Mito_carr PF00153.27 NODE_35091_length_615_cov_419.046552_g28098_i0reverse_frame_1 - 5.5e-23 80.7 0.0 2.1e-12 46.8 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF4656 PF15551.6 NODE_35075_length_616_cov_2.296041_g28086_i0reverse_frame_2 - 2.2 7.7 5.8 2.7 7.4 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) Trypsin PF00089.26 NODE_35075_length_616_cov_2.296041_g28086_i0forward_frame_2 - 5.7e-12 45.9 0.0 1.7e-11 44.4 0.0 1.7 1 1 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 NODE_35075_length_616_cov_2.296041_g28086_i0forward_frame_2 - 3.1e-08 34.6 0.0 4.4e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Trypsin-like peptidase domain Peptidase_C4 PF00863.19 NODE_35075_length_616_cov_2.296041_g28086_i0forward_frame_2 - 0.027 13.8 0.0 0.3 10.4 0.0 2.0 2 0 0 2 2 2 0 Peptidase family C4 EamA PF00892.20 NODE_35074_length_616_cov_2.507745_g28085_i0forward_frame_3 - 3.6e-08 33.7 14.3 4.9e-08 33.2 14.3 1.2 1 0 0 1 1 1 1 EamA-like transporter family 7TMR-DISM_7TM PF07695.11 NODE_35074_length_616_cov_2.507745_g28085_i0forward_frame_3 - 0.27 11.1 10.6 0.054 13.4 7.2 1.4 2 0 0 2 2 2 0 7TM diverse intracellular signalling Neur_chan_memb PF02932.16 NODE_35066_length_616_cov_41.678141_g28078_i0reverse_frame_2 - 0.0019 18.3 3.4 0.0023 18.1 3.4 1.1 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel transmembrane region CCSAP PF15748.5 NODE_35066_length_616_cov_41.678141_g28078_i0reverse_frame_2 - 0.13 12.4 10.6 0.17 12.0 10.6 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated TB2_DP1_HVA22 PF03134.19 NODE_35047_length_616_cov_139.628227_g22022_i2reverse_frame_3 - 2.8e-16 59.2 3.7 4.4e-16 58.6 3.7 1.3 1 0 0 1 1 1 1 TB2/DP1, HVA22 family TrmO PF01980.16 NODE_35044_length_616_cov_190.290878_g28057_i0forward_frame_3 - 0.084 13.1 0.0 0.25 11.6 0.0 1.8 1 1 1 2 2 2 0 tRNA-methyltransferase O HopA1 PF17914.1 NODE_35038_length_616_cov_324.063683_g28051_i0forward_frame_2 - 0.045 13.5 0.1 0.081 12.7 0.1 1.4 1 0 0 1 1 1 0 HopA1 effector protein family DsrH PF04077.12 NODE_35021_length_617_cov_81.151203_g28035_i0reverse_frame_2 - 0.027 14.6 0.1 0.22 11.7 0.0 2.2 2 0 0 2 2 2 0 DsrH like protein ParD_antitoxin PF03693.14 NODE_35021_length_617_cov_81.151203_g28035_i0reverse_frame_2 - 0.076 13.4 0.0 5 7.6 0.1 2.7 3 0 0 3 3 3 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH SLATT_4 PF18186.1 NODE_34979_length_618_cov_1.929674_g27996_i0reverse_frame_3 - 0.36 10.4 7.2 0.21 11.2 5.0 1.7 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 4 Clathrin_H_link PF13838.6 NODE_34979_length_618_cov_1.929674_g27996_i0reverse_frame_2 - 0.034 14.1 1.3 0.063 13.2 0.1 2.0 2 0 0 2 2 2 0 Clathrin-H-link DUF3454 PF11936.8 NODE_34979_length_618_cov_1.929674_g27996_i0reverse_frame_2 - 0.13 12.7 0.4 0.41 11.1 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3454) DUF446 PF04287.12 NODE_34976_length_618_cov_2.972556_g27993_i0reverse_frame_2 - 0.075 13.1 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 tRNA pseudouridine synthase C Na_H_Exchanger PF00999.21 NODE_34976_length_618_cov_2.972556_g27993_i0forward_frame_3 - 2.6e-13 49.5 6.1 3e-13 49.3 6.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family SIT PF15330.6 NODE_34976_length_618_cov_2.972556_g27993_i0forward_frame_2 - 0.029 14.8 0.1 0.053 14.0 0.1 1.4 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT POLO_box PF00659.18 NODE_34971_length_618_cov_58.428816_g27668_i1reverse_frame_3 - 6e-13 48.8 0.5 1.1e-12 47.9 0.5 1.5 1 0 0 1 1 1 1 POLO box duplicated region DUF4431 PF14485.6 NODE_34971_length_618_cov_58.428816_g27668_i1forward_frame_3 - 0.16 11.8 0.2 0.62 9.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) T4-Gluco-transf PF09198.10 NODE_34971_length_618_cov_58.428816_g27668_i1forward_frame_2 - 0.28 10.8 0.2 0.28 10.8 0.2 2.2 2 0 0 2 2 2 0 Bacteriophage T4 beta-glucosyltransferase ATE_N PF04376.13 NODE_34969_length_618_cov_71.240137_g27987_i0forward_frame_2 - 2.9e-05 24.4 2.2 0.00029 21.2 0.3 2.7 2 1 0 2 2 2 1 Arginine-tRNA-protein transferase, N terminus LAG1-DNAbind PF09271.11 NODE_34969_length_618_cov_71.240137_g27987_i0forward_frame_2 - 0.092 13.4 2.8 4 8.0 0.3 2.2 2 0 0 2 2 2 0 LAG1, DNA binding Stc1 PF12898.7 NODE_34963_length_618_cov_90.751286_g27981_i0forward_frame_2 - 0.00028 21.4 0.3 0.13 12.9 0.0 3.1 2 1 0 2 2 2 1 Stc1 domain EphA2_TM PF14575.6 NODE_34963_length_618_cov_90.751286_g27981_i0forward_frame_2 - 0.33 11.9 2.6 21 6.1 0.3 3.2 3 0 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain Chitin_synth_1 PF01644.17 NODE_34962_length_618_cov_90.751286_g27980_i0forward_frame_2 - 4.9e-06 26.6 0.3 9.2e-06 25.7 0.3 1.5 1 0 0 1 1 1 1 Chitin synthase DUF3916 PF13079.6 NODE_34962_length_618_cov_90.751286_g27980_i0forward_frame_2 - 0.019 14.8 0.3 0.032 14.1 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) Cys_Met_Meta_PP PF01053.20 NODE_34960_length_618_cov_98.480274_g27979_i0forward_frame_3 - 1.8e-49 168.3 0.0 2.2e-49 168.0 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 NODE_34960_length_618_cov_98.480274_g27979_i0forward_frame_3 - 0.0035 16.6 0.0 0.0043 16.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Cadherin_2 PF08266.12 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 0.00014 21.7 0.8 0.00034 20.4 0.8 1.6 1 0 0 1 1 1 1 Cadherin-like OmpH PF03938.14 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 0.0077 16.6 10.5 0.0077 16.6 10.5 2.9 1 1 2 3 3 3 1 Outer membrane protein (OmpH-like) Nore1-SARAH PF16517.5 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 0.87 9.5 6.9 6.6 6.7 0.1 3.1 3 0 0 3 3 3 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Exonuc_VII_L PF02601.15 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 1.7 8.1 12.0 2.2 7.8 12.0 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Hemagglutinin PF00509.18 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 1.7 6.9 6.1 2.2 6.6 6.1 1.1 1 0 0 1 1 1 0 Haemagglutinin DUF4407 PF14362.6 NODE_34957_length_618_cov_108.053173_g24689_i1reverse_frame_2 - 5.5 6.3 15.4 3 7.1 13.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) EF-hand_6 PF13405.6 NODE_34939_length_618_cov_640.567753_g11610_i1reverse_frame_2 - 0.00093 18.9 1.0 0.0063 16.3 0.0 2.3 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 NODE_34939_length_618_cov_640.567753_g11610_i1reverse_frame_2 - 0.013 15.0 0.7 0.028 14.0 0.1 2.0 2 0 0 2 2 2 0 EF hand EF-hand_7 PF13499.6 NODE_34939_length_618_cov_640.567753_g11610_i1reverse_frame_2 - 0.074 13.5 0.0 0.97 9.9 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain pair HypA PF01155.19 NODE_34939_length_618_cov_640.567753_g11610_i1forward_frame_2 - 1.7 8.7 0.0 1.7 8.7 0.0 2.3 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF4707 PF15806.5 NODE_34938_length_618_cov_858.487136_g27962_i0reverse_frame_3 - 0.19 10.6 4.3 0.25 10.2 4.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4707) DUF1381 PF07129.11 ORF96571 - 0.13 12.1 0.1 0.34 10.8 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) UPF0731 PF14982.6 ORF94525 - 0.077 13.2 0.1 0.22 11.7 0.1 1.7 1 1 0 1 1 1 0 UPF0731 family Capsid-VNN PF11729.8 ORF93417 - 0.12 11.4 3.1 0.14 11.2 3.1 1.2 1 0 0 1 1 1 0 nodavirus capsid protein RabGAP-TBC PF00566.18 ORF90097 - 2.7e-28 99.1 1.2 2.7e-28 99.1 1.2 1.4 2 0 0 2 2 2 1 Rab-GTPase-TBC domain adh_short PF00106.25 ORF89673 - 9.8e-08 31.7 0.0 1.2e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF89673 - 4.6e-07 29.6 0.3 6.2e-07 29.2 0.3 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase LysR_substrate PF03466.20 ORF89673 - 0.031 13.7 1.1 0.034 13.5 0.3 1.5 2 0 0 2 2 2 0 LysR substrate binding domain GDP_Man_Dehyd PF16363.5 ORF89673 - 0.096 12.1 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase ATG16 PF08614.11 ORF89422 - 0.062 13.5 23.7 0.073 13.3 15.5 2.3 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 ORF89422 - 0.34 10.9 33.0 0.083 12.9 14.1 3.4 1 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding CENP-F_N PF10481.9 ORF89422 - 1.6 8.3 19.5 2.3 7.8 19.5 1.3 1 0 0 1 1 1 0 Cenp-F N-terminal domain HAP1_N PF04849.13 ORF89422 - 1.7 7.7 28.0 2.6 7.2 28.0 1.3 1 1 0 1 1 1 0 HAP1 N-terminal conserved region Spc7 PF08317.11 ORF89422 - 2.3 7.0 29.2 0.45 9.3 20.0 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein FlaC_arch PF05377.11 ORF89422 - 2.5 8.5 14.9 1.7 9.1 2.6 3.8 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) DUF724 PF05266.14 ORF89422 - 4.8 7.0 19.6 3.6 7.4 7.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF724) ANAPC10 PF03256.16 ORF87788 - 3.3e-57 193.1 0.1 3.5e-57 193.1 0.1 1.0 1 0 0 1 1 1 1 Anaphase-promoting complex, subunit 10 (APC10) F5_F8_type_C PF00754.25 ORF87788 - 0.00023 21.3 0.1 0.00033 20.8 0.1 1.4 1 1 0 1 1 1 1 F5/8 type C domain PITH PF06201.13 ORF87788 - 0.00042 20.6 1.0 0.00064 20.0 1.0 1.3 1 0 0 1 1 1 1 PITH domain MGS PF02142.22 ORF86551 - 1.2e-19 70.3 0.0 2.2e-19 69.4 0.0 1.4 1 0 0 1 1 1 1 MGS-like domain SmpA_OmlA PF04355.13 ORF86551 - 0.0041 16.9 0.0 0.0077 16.0 0.0 1.4 1 0 0 1 1 1 1 SmpA / OmlA family ImpA_N PF06812.12 ORF8574 - 0.097 12.8 0.7 0.19 11.8 0.2 1.8 1 1 1 2 2 2 0 ImpA, N-terminal, type VI secretion system ABC_tran PF00005.27 ORF85650 - 9.7e-15 55.3 0.0 1.3e-14 54.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF85650 - 1e-06 28.8 0.0 1.4e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system zf-LITAF-like PF10601.9 ORF84157 - 8.9e-05 22.7 12.8 0.00056 20.1 12.8 1.9 1 1 0 1 1 1 1 LITAF-like zinc ribbon domain Shisa PF13908.6 ORF84157 - 0.11 12.7 4.3 0.13 12.5 3.7 1.5 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator Prominin PF05478.11 ORF84157 - 4.2 5.2 5.7 5.4 4.8 5.7 1.1 1 0 0 1 1 1 0 Prominin CRAL_TRIO PF00650.20 ORF82095 - 5.9e-15 55.3 0.1 7.4e-15 55.0 0.1 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF82095 - 0.0068 16.6 0.0 0.009 16.2 0.0 1.2 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain NAD-GH PF10712.9 ORF78568 - 4.1e-28 98.2 0.3 4.7e-28 98.0 0.3 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase PRP21_like_P PF12230.8 ORF781 - 1.4e-17 64.3 3.4 1.4e-17 64.3 3.4 1.7 2 0 0 2 2 2 1 Pre-mRNA splicing factor PRP21 like protein zf_UBZ PF18439.1 ORF781 - 9.6e-07 28.3 0.2 2e-06 27.2 0.2 1.6 1 0 0 1 1 1 1 Ubiquitin-Binding Zinc Finger Actin_micro PF17003.5 ORF781 - 0.001 18.4 0.5 0.0012 18.1 0.5 1.1 1 0 0 1 1 1 1 Putative actin-like family OmpA PF00691.20 ORF781 - 0.0054 17.1 0.1 0.012 16.0 0.1 1.6 1 0 0 1 1 1 1 OmpA family DUF4451 PF14616.6 ORF781 - 0.0098 16.1 0.2 0.019 15.2 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4451) OrsD PF12013.8 ORF781 - 0.066 13.7 1.6 0.097 13.1 0.5 2.0 1 1 1 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D Ank_2 PF12796.7 ORF73652 - 3.1e-10 40.5 0.2 5.1e-08 33.4 0.0 2.8 2 2 1 3 3 3 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF73652 - 2.4e-08 34.4 0.0 0.0041 17.7 0.0 3.7 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF73652 - 4.9e-08 33.1 0.0 0.0049 17.2 0.0 3.8 3 1 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF73652 - 2.3e-07 30.6 0.0 0.05 14.2 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF73652 - 1.4e-05 25.3 0.4 0.12 12.7 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeats (many copies) NYN PF01936.18 ORF73652 - 0.18 12.2 0.0 0.54 10.7 0.0 1.8 1 1 0 1 1 1 0 NYN domain DUF2162 PF09930.9 ORF73609 - 0.091 12.2 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) DUF1381 PF07129.11 ORF73223 - 0.13 12.1 0.1 0.34 10.8 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) Tyr_Deacylase PF02580.16 ORF72763 - 1.8e-54 184.1 0.1 2.3e-54 183.8 0.1 1.1 1 0 0 1 1 1 1 D-Tyr-tRNA(Tyr) deacylase DUF3699 PF12480.8 ORF72347 - 0.19 11.9 0.7 13 6.1 0.0 3.6 5 0 0 5 5 5 0 Protein of unknown function (DUF3699) MethyTransf_Reg PF10119.9 ORF67550 - 0.14 12.9 0.2 1.3 9.7 0.0 2.3 2 0 0 2 2 2 0 Predicted methyltransferase regulatory domain LMBR1 PF04791.16 ORF64695 - 0.011 14.6 2.0 0.011 14.6 2.0 1.5 2 0 0 2 2 2 0 LMBR1-like membrane protein DUF4131 PF13567.6 ORF64695 - 0.24 11.1 0.1 0.24 11.1 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) PalH PF08733.10 ORF64695 - 3.4 6.6 11.6 0.79 8.7 5.2 2.0 2 0 0 2 2 2 0 PalH/RIM21 Prominin PF05478.11 ORF64570 - 9 4.1 12.0 11 3.8 11.8 1.4 1 1 0 1 1 1 0 Prominin CIA30 PF08547.12 ORF64350 - 0.0003 20.8 0.0 0.00057 19.9 0.0 1.5 1 1 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) START PF01852.19 ORF62888 - 6.5e-05 22.4 0.0 6.9e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 START domain BRCT_2 PF16589.5 ORF62351 - 5.2e-13 49.2 0.0 3.9e-12 46.4 0.0 2.1 2 0 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain Myb_DNA-binding PF00249.31 ORF62351 - 0.027 14.6 0.0 0.043 14.0 0.0 1.3 1 0 0 1 1 1 0 Myb-like DNA-binding domain PAPS_reduct PF01507.19 ORF61973 - 2.5e-37 128.6 0.0 2.9e-37 128.4 0.0 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family SPACA7 PF15307.6 ORF55215 - 0.13 12.5 5.0 0.75 10.1 0.4 2.6 2 1 1 3 3 3 0 Sperm acrosome-associated protein 7 HTH_28 PF13518.6 ORF5497 - 1.3e-23 82.9 0.1 3.4e-11 43.1 0.1 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_23 PF13384.6 ORF5497 - 2.3e-08 33.6 0.4 0.0022 17.7 0.1 2.9 2 1 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 ORF5497 - 1.1e-07 31.8 2.4 0.0098 15.9 0.0 2.9 3 0 0 3 3 3 2 Winged helix-turn helix HTH_Tnp_1 PF01527.20 ORF5497 - 3.1e-07 30.6 0.8 0.0022 18.3 0.1 2.6 1 1 1 2 2 2 2 Transposase BrkDBD PF09607.10 ORF5497 - 9e-06 25.4 0.0 2.2e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 Brinker DNA-binding domain DUF1153 PF06627.11 ORF5497 - 0.00011 22.3 0.1 0.056 13.6 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1153) HTH_32 PF13565.6 ORF5497 - 0.0091 16.6 7.2 0.22 12.2 2.7 2.9 2 2 0 2 2 2 1 Homeodomain-like domain CENP-B_N PF04218.13 ORF5497 - 0.0099 15.5 0.0 0.041 13.5 0.0 2.0 2 0 0 2 2 2 1 CENP-B N-terminal DNA-binding domain SCAB-ABD PF16711.5 ORF5497 - 0.023 14.6 0.1 0.075 12.9 0.1 1.7 2 0 0 2 2 2 0 Actin-binding domain of plant-specific actin-binding protein P22_Cro PF14549.6 ORF5497 - 0.066 13.1 0.1 0.13 12.1 0.1 1.5 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro Phage_CII PF05269.11 ORF5497 - 0.12 12.6 0.2 0.49 10.7 0.0 1.9 2 0 0 2 2 2 0 Bacteriophage CII protein UQ_con PF00179.26 ORF5451 - 1.4e-39 134.9 0.3 2e-39 134.4 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF5451 - 0.0042 17.4 0.1 0.0042 17.4 0.1 1.8 2 0 0 2 2 2 1 RWD domain CDC45 PF02724.14 ORF5451 - 0.043 12.1 6.8 0.051 11.9 6.8 1.1 1 0 0 1 1 1 0 CDC45-like protein RRM_3 PF08777.11 ORF5451 - 1 9.4 5.5 0.67 10.0 3.7 1.5 2 0 0 2 2 2 0 RNA binding motif Homeobox_KN PF05920.11 ORF54025 - 5.1e-17 61.5 1.8 5.3e-17 61.4 0.4 1.8 2 0 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF54025 - 9.6e-10 38.2 0.8 9.6e-10 38.2 0.8 1.8 2 0 0 2 2 2 1 Homeodomain YdaS_antitoxin PF15943.5 ORF54025 - 0.0077 16.1 0.2 0.018 14.9 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Homeobox_KN PF05920.11 ORF50775 - 5.1e-17 61.5 1.8 5.3e-17 61.4 0.4 1.8 2 0 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF50775 - 9.6e-10 38.2 0.8 9.6e-10 38.2 0.8 1.8 2 0 0 2 2 2 1 Homeodomain YdaS_antitoxin PF15943.5 ORF50775 - 0.0077 16.1 0.2 0.018 14.9 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Snf7 PF03357.21 ORF50532 - 0.0016 18.0 8.0 0.0016 18.0 8.0 1.8 2 0 0 2 2 2 1 Snf7 UPF0731 PF14982.6 ORF49214 - 0.077 13.2 0.1 0.22 11.7 0.1 1.7 1 1 0 1 1 1 0 UPF0731 family YtxH PF12732.7 ORF48685 - 0.065 13.8 0.7 3.3 8.3 0.7 2.4 1 1 0 1 1 1 0 YtxH-like protein GLTSCR1 PF15249.6 ORF48685 - 6.4 7.3 10.9 17 5.9 2.2 3.0 1 1 2 3 3 3 0 Conserved region of unknown function on GLTSCR protein GRP PF07172.11 ORF47110 - 1.2 9.8 34.4 2.1 9.1 34.4 1.4 1 0 0 1 1 1 0 Glycine rich protein family Capsid-VNN PF11729.8 ORF42990 - 0.12 11.4 3.1 0.14 11.2 3.1 1.2 1 0 0 1 1 1 0 nodavirus capsid protein Tetraspanin PF00335.20 ORF42852 - 4.6e-11 42.9 5.4 4.6e-11 42.9 5.4 2.0 1 1 1 2 2 2 1 Tetraspanin family DUF2207 PF09972.9 ORF42852 - 0.00035 19.5 6.9 0.0025 16.7 0.0 2.0 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) CbtA PF09490.10 ORF42852 - 0.13 12.1 2.3 16 5.1 0.0 2.3 2 0 0 2 2 2 0 Probable cobalt transporter subunit (CbtA) DUF4446 PF14584.6 ORF42852 - 0.18 11.7 0.2 0.18 11.7 0.2 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF4446) Pex24p PF06398.11 ORF42852 - 0.28 10.1 4.2 0.69 8.8 4.2 1.7 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin DHHC PF01529.20 ORF42852 - 6.8 6.8 14.6 1.5 8.9 0.7 2.2 1 1 1 2 2 2 0 DHHC palmitoyltransferase ADIP PF11559.8 ORF42271 - 0.063 13.4 0.2 0.11 12.6 0.2 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding PKS_DE PF18369.1 ORF42271 - 2 9.0 7.2 3.2 8.4 0.3 3.3 3 1 0 3 3 3 0 Polyketide synthase dimerisation element domain Defensin_3 PF08131.11 ORF41301 - 0.045 13.9 1.2 1.4 9.1 0.1 3.3 2 1 0 2 2 2 0 Defensin-like peptide family BRCT_2 PF16589.5 ORF40064 - 5.2e-13 49.2 0.0 3.9e-12 46.4 0.0 2.1 2 0 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain Myb_DNA-binding PF00249.31 ORF40064 - 0.027 14.6 0.0 0.043 14.0 0.0 1.3 1 0 0 1 1 1 0 Myb-like DNA-binding domain ATP-synt_Eps PF04627.13 ORF378 - 0.18 11.8 3.1 0.35 10.9 3.1 1.4 1 0 0 1 1 1 0 Mitochondrial ATP synthase epsilon chain KH_1 PF00013.29 ORF37567 - 1.1e-07 31.5 0.1 1.8e-07 30.9 0.1 1.4 1 0 0 1 1 1 1 KH domain CbiG_N PF11760.8 ORF37567 - 0.015 15.3 0.3 0.1 12.6 0.0 2.0 1 1 1 2 2 2 0 Cobalamin synthesis G N-terminal DUF3381 PF11861.8 ORF37567 - 0.25 11.1 0.0 0.33 10.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) LRR19-TM PF15176.6 ORF37192 - 0.14 12.2 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain zf-LITAF-like PF10601.9 ORF25016 - 8.9e-05 22.7 12.8 0.00056 20.1 12.8 1.9 1 1 0 1 1 1 1 LITAF-like zinc ribbon domain Shisa PF13908.6 ORF25016 - 0.11 12.7 4.3 0.13 12.5 3.7 1.5 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator Prominin PF05478.11 ORF25016 - 4.2 5.2 5.7 5.4 4.8 5.7 1.1 1 0 0 1 1 1 0 Prominin DUF572 PF04502.13 ORF22896 - 7.7e-05 22.5 5.3 9.7e-05 22.1 5.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) DUF5563 PF17718.1 ORF22896 - 0.026 14.1 4.3 0.15 11.6 4.3 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5563) BAF1_ABF1 PF04684.13 ORF22896 - 0.15 11.1 3.9 0.18 10.8 3.9 1.1 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor Ras PF00071.22 ORF16526 - 2.2e-52 176.9 1.4 2.6e-52 176.7 1.4 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF16526 - 6.5e-33 113.5 0.1 1.4e-32 112.5 0.1 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF16526 - 2.7e-17 62.8 0.3 3.3e-17 62.5 0.3 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF16526 - 4.5e-09 36.4 0.0 8.4e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF16526 - 5e-06 26.1 0.3 6e-06 25.8 0.3 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF16526 - 1e-05 25.2 1.1 0.00018 21.1 0.3 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF16526 - 2.9e-05 23.6 0.1 3.7e-05 23.3 0.1 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 ORF16526 - 0.00031 20.7 0.4 0.15 11.9 0.1 2.5 1 1 0 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 ORF16526 - 0.0008 19.0 0.8 0.0065 16.0 0.8 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B TniB PF05621.11 ORF16526 - 0.11 11.9 0.0 0.22 10.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein PSI_PsaJ PF01701.18 ORF16439 - 0.0034 17.9 0.1 0.0061 17.1 0.1 1.5 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ zf-B_box PF00643.24 ORF152676 - 0.005 17.0 3.8 0.0085 16.2 3.8 1.3 1 0 0 1 1 1 1 B-box zinc finger UPF0731 PF14982.6 ORF151934 - 0.077 13.2 0.1 0.22 11.7 0.1 1.7 1 1 0 1 1 1 0 UPF0731 family DUF5539 PF17693.1 ORF150266 - 0.033 13.8 2.3 0.041 13.5 2.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5539) Stc1 PF12898.7 ORF147770 - 0.011 16.3 4.1 1.2 9.7 0.3 3.3 2 1 1 3 3 3 0 Stc1 domain Moricin PF06451.11 ORF144597 - 0.098 12.4 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Moricin DUF1118 PF06549.12 ORF143869 - 9.6e-07 29.1 7.9 9.6e-07 29.1 7.9 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1118) CDO_I PF05995.12 ORF143214 - 8e-12 44.8 0.0 9.9e-12 44.5 0.0 1.2 1 0 0 1 1 1 1 Cysteine dioxygenase type I PCO_ADO PF07847.12 ORF143214 - 0.013 15.0 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 PCO_ADO Cupin_1 PF00190.22 ORF143214 - 0.015 14.9 0.0 0.024 14.3 0.0 1.2 1 0 0 1 1 1 0 Cupin zf-B_box PF00643.24 ORF142043 - 0.00078 19.6 1.3 0.00078 19.6 1.3 4.1 4 1 0 4 4 4 1 B-box zinc finger zf-C3HC4_3 PF13920.6 ORF142043 - 0.0095 15.8 10.0 0.0095 15.8 10.0 3.7 4 0 0 4 4 4 2 Zinc finger, C3HC4 type (RING finger) DNA_topoisoIV PF00521.20 ORF142043 - 0.056 12.3 0.0 0.074 11.9 0.0 1.1 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A E6 PF00518.17 ORF142043 - 0.3 11.5 14.6 0.52 10.8 8.7 2.3 2 0 0 2 2 2 0 Early Protein (E6) SPACA7 PF15307.6 ORF140692 - 0.13 12.5 5.0 0.75 10.1 0.4 2.6 2 1 1 3 3 3 0 Sperm acrosome-associated protein 7 BatD PF13584.6 ORF140521 - 0.023 13.5 2.1 2.1 7.1 0.1 2.5 3 0 0 3 3 3 0 Oxygen tolerance ABC2_membrane_3 PF12698.7 ORF140521 - 0.077 12.1 11.6 0.1 11.7 11.6 1.3 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2070 PF09843.9 ORF140521 - 1.2 7.3 10.2 1.7 6.9 10.2 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Chromate_transp PF02417.15 ORF140521 - 1.7 8.7 16.0 25 5.0 12.8 2.1 2 0 0 2 2 2 0 Chromate transporter SPC25 PF06703.11 ORF140521 - 3.8 7.3 9.8 0.57 10.0 3.9 2.3 1 1 1 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) EphA2_TM PF14575.6 ORF140521 - 9.7 7.1 0.0 9.7 7.1 0.0 3.2 4 0 0 4 4 4 0 Ephrin type-A receptor 2 transmembrane domain Homeobox_KN PF05920.11 ORF137374 - 5.1e-17 61.5 1.8 5.3e-17 61.4 0.4 1.8 2 0 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF137374 - 9.6e-10 38.2 0.8 9.6e-10 38.2 0.8 1.8 2 0 0 2 2 2 1 Homeodomain YdaS_antitoxin PF15943.5 ORF137374 - 0.0077 16.1 0.2 0.018 14.9 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT WD40 PF00400.32 ORF136796 - 5.8e-07 30.1 5.8 7.6e-06 26.6 0.2 3.6 3 2 0 3 3 3 2 WD domain, G-beta repeat cNMP_binding PF00027.29 ORF130760 - 3.5e-05 23.8 0.0 5.6e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Vasculin PF15337.6 ORF130760 - 0.062 14.1 2.2 0.12 13.2 2.2 1.4 1 0 0 1 1 1 0 Vascular protein family Vasculin-like 1 Homeobox_KN PF05920.11 ORF129602 - 1.9e-16 59.7 0.3 1.9e-16 59.7 0.3 2.7 2 1 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF129602 - 1.8e-09 37.3 2.0 6.6e-09 35.5 0.2 2.4 2 0 0 2 2 2 1 Homeodomain PCI PF01399.27 ORF129602 - 0.043 14.3 1.5 0.075 13.5 1.5 1.4 1 0 0 1 1 1 0 PCI domain DUF3530 PF12048.8 ORF129602 - 3.2 7.1 8.6 14 5.0 8.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3530) MG4 PF17789.1 ORF128624 - 0.07 13.3 2.6 0.11 12.6 0.2 2.3 2 1 1 3 3 3 0 Macroglobulin domain MG4 FBPase PF00316.20 ORF128624 - 1.8 8.0 9.8 0.85 9.1 2.2 2.2 1 1 1 2 2 2 0 Fructose-1-6-bisphosphatase, N-terminal domain zf-B_box PF00643.24 ORF128024 - 5e-07 29.8 8.0 5e-07 29.8 8.0 3.9 3 1 0 3 3 3 1 B-box zinc finger zf-UBR PF02207.20 ORF128024 - 0.0046 17.1 8.2 0.0046 17.1 8.2 2.8 2 1 0 2 2 2 1 Putative zinc finger in N-recognin (UBR box) Capsid_NCLDV PF04451.12 ORF128024 - 0.029 14.2 0.4 0.041 13.7 0.4 1.2 1 0 0 1 1 1 0 Large eukaryotic DNA virus major capsid protein Myb_DNA-binding PF00249.31 ORF126642 - 8.4e-11 41.9 0.0 1.4e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF126642 - 0.038 13.9 0.1 0.038 13.9 0.1 2.1 3 0 0 3 3 3 0 Myb DNA-binding like Shugoshin_C PF07557.11 ORF126642 - 0.073 12.9 1.4 0.073 12.9 1.4 1.7 2 0 0 2 2 2 0 Shugoshin C terminus GST_C_3 PF14497.6 ORF126455 - 4.8e-14 52.4 0.4 7.3e-14 51.8 0.4 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF126455 - 2e-10 40.9 0.0 3.8e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF126455 - 2.2e-05 24.6 0.2 3.5e-05 23.9 0.2 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF126455 - 0.03 14.7 0.0 0.1 13.1 0.0 1.9 1 1 0 1 1 1 0 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF126455 - 0.16 12.0 0.0 0.35 10.9 0.0 1.7 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain ATP_bind_1 PF03029.17 ORF125924 - 8.4e-31 107.6 0.4 8.4e-31 107.6 0.4 1.4 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 ORF125924 - 0.00053 19.6 0.0 0.00053 19.6 0.0 1.5 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF125924 - 0.057 13.3 0.2 0.11 12.3 0.0 1.5 1 1 0 1 1 1 0 RsgA GTPase DUF3811 PF11656.8 ORF125924 - 0.071 13.5 1.9 0.12 12.8 1.9 1.3 1 0 0 1 1 1 0 YjbD family (DUF3811) DUF2951 PF11166.8 ORF125924 - 2.2 8.6 6.4 7.3 6.9 5.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) DUF3362 PF11842.8 ORF12463 - 4e-46 157.1 1.5 5.6e-46 156.6 1.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3362) Radical_SAM PF04055.21 ORF12463 - 0.052 13.9 0.0 0.48 10.8 0.0 2.0 2 0 0 2 2 2 0 Radical SAM superfamily NPL PF17800.1 ORF121673 - 6.9e-08 33.0 1.0 1.5e-07 31.9 0.0 1.9 2 0 0 2 2 2 1 Nucleoplasmin-like domain DUF1137 PF06587.11 ORF121673 - 0.25 11.4 0.9 10 6.2 0.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1137) Mito_carr PF00153.27 ORF121556 - 2.4e-36 123.5 0.3 2e-17 62.9 0.3 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein EF-hand_7 PF13499.6 ORF120718 - 7.6e-24 84.0 1.6 6.2e-12 45.8 0.2 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF120718 - 1.2e-20 71.4 1.7 3.1e-05 23.2 0.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF120718 - 5.5e-20 71.0 4.1 6.2e-08 32.4 0.3 3.3 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF120718 - 1.2e-19 68.5 0.2 0.00017 21.3 0.0 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF120718 - 1.6e-14 52.7 2.3 4.2e-05 22.9 0.0 4.3 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF120718 - 2.4e-05 24.6 0.0 0.00043 20.6 0.0 2.2 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF120718 - 0.00077 19.7 0.0 1.3 9.4 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF120718 - 0.0013 18.6 0.3 0.18 11.8 0.1 2.4 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_11 PF08976.11 ORF120718 - 0.11 13.4 0.1 4.6 8.2 0.0 2.1 1 1 1 2 2 2 0 EF-hand domain Homeobox_KN PF05920.11 ORF11713 - 5.1e-17 61.5 1.8 5.3e-17 61.4 0.4 1.8 2 0 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF11713 - 9.6e-10 38.2 0.8 9.6e-10 38.2 0.8 1.8 2 0 0 2 2 2 1 Homeodomain YdaS_antitoxin PF15943.5 ORF11713 - 0.0077 16.1 0.2 0.018 14.9 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Tnp_zf-ribbon_2 PF13842.6 ORF112468 - 0.5 11.2 16.0 4 8.3 2.0 4.7 3 2 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon Aldose_epim PF01263.20 ORF111690 - 7.7e-29 100.9 0.0 9.2e-29 100.7 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase DUF4083 PF13314.6 ORF111686 - 9.4 6.3 10.9 1.2 9.1 2.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) Viral_RdRp_C PF17501.2 ORF110754 - 0.14 12.6 1.7 0.19 12.2 0.2 1.9 2 1 0 2 2 2 0 Viral RNA-directed RNA polymerase UPF0242 PF06785.11 ORF110754 - 5.3 7.1 15.1 8.7 6.4 15.0 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4064 PF13273.6 ORF109949 - 0.0025 18.1 2.6 0.0095 16.2 0.7 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF4064) DUF4386 PF14329.6 ORF109949 - 0.0052 16.7 7.9 0.12 12.3 0.6 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4386) MIG-14_Wnt-bd PF06664.12 ORF109949 - 0.023 13.9 2.6 0.045 13.0 2.6 1.6 1 1 0 1 1 1 0 Wnt-binding factor required for Wnt secretion ATPase_gene1 PF09527.10 ORF109949 - 0.054 13.7 0.6 0.054 13.7 0.6 3.5 4 0 0 4 4 4 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Cytomega_TRL10 PF06084.11 ORF109949 - 0.15 12.0 0.9 0.22 11.6 0.0 1.6 2 0 0 2 2 2 0 Cytomegalovirus TRL10 protein DUF2207 PF09972.9 ORF109949 - 6.6 5.4 5.6 1.3 7.7 1.3 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF1256 PF06866.11 ORF107617 - 0.013 14.9 0.0 0.019 14.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1256) partial_CstF PF15861.5 ORF106360 - 0.053 13.3 0.4 0.14 11.9 0.4 1.7 1 0 0 1 1 1 0 Partial cleavage stimulation factor domain DUF16 PF01519.16 ORF106360 - 0.13 12.7 5.1 0.44 11.1 0.9 2.3 2 1 0 2 2 2 0 Protein of unknown function DUF16 Arrestin_C PF02752.22 ORF105477 - 0.016 15.6 0.5 0.048 14.1 0.3 1.8 2 0 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain G_path_suppress PF15991.5 ORF103898 - 3.1 7.8 5.1 3.9 7.5 5.1 1.3 1 0 0 1 1 1 0 G-protein pathway suppressor Ras PF00071.22 ORF10076 - 8.5e-06 25.5 0.6 0.0012 18.4 0.0 2.4 2 1 0 2 2 2 2 Ras family Roc PF08477.13 ORF10076 - 1.9e-05 24.9 0.2 0.00016 21.8 0.0 2.2 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF10076 - 2e-05 24.6 0.3 8.3e-05 22.6 0.3 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase ATPase_2 PF01637.18 ORF10076 - 0.00013 22.0 1.4 0.00028 20.9 1.4 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea Peptidase_S49_N PF08496.10 ORF10076 - 0.001 19.1 0.9 0.0018 18.4 0.9 1.5 1 0 0 1 1 1 1 Peptidase family S49 N-terminal SRPRB PF09439.10 ORF10076 - 0.0092 15.4 1.1 0.056 12.9 0.0 2.1 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit NB-ARC PF00931.22 ORF10076 - 0.013 14.7 0.0 0.029 13.5 0.0 1.5 1 1 0 1 1 1 0 NB-ARC domain RsgA_GTPase PF03193.16 ORF10076 - 0.073 13.0 0.1 0.22 11.4 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase Dynamin_N PF00350.23 ORF10076 - 0.081 13.0 3.4 1.3 9.1 3.4 2.3 1 1 0 1 1 1 0 Dynamin family DUF3899 PF13038.6 ORF10076 - 5.7 7.5 5.7 16 6.1 1.4 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF3899) DUF226 PF02890.14 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_1 - 0.36 10.8 8.2 0.048 13.7 2.5 2.0 1 1 1 2 2 2 0 Borrelia family of unknown function DUF226 Wzy_C PF04932.15 NODE_35372_length_610_cov_2.600000_g28346_i0reverse_frame_1 - 0.052 13.2 1.1 0.052 13.2 1.1 3.2 3 1 0 3 3 3 0 O-Antigen ligase GntR PF00392.21 NODE_35360_length_610_cov_53.561739_g28334_i0reverse_frame_1 - 0.016 14.8 1.9 8.1 6.2 0.0 3.4 3 2 1 4 4 4 0 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 NODE_35360_length_610_cov_53.561739_g28334_i0reverse_frame_1 - 0.095 12.6 2.3 9.5 6.2 0.0 3.3 3 0 0 3 3 3 0 MarR family Peptidase_C97 PF05903.14 NODE_35353_length_610_cov_101.189565_g28327_i0reverse_frame_1 - 3.2e-20 72.5 0.0 4.6e-20 72.0 0.0 1.2 1 0 0 1 1 1 1 PPPDE putative peptidase domain TonB_dep_Rec PF00593.24 NODE_35320_length_611_cov_3.185764_g28299_i0reverse_frame_1 - 6.1e-13 49.4 23.6 7.5e-13 49.2 23.6 1.1 1 0 0 1 1 1 1 TonB dependent receptor Hamartin PF04388.12 NODE_35318_length_611_cov_3.590278_g28297_i0reverse_frame_1 - 0.57 8.8 4.1 0.62 8.7 4.1 1.0 1 0 0 1 1 1 0 Hamartin protein Xan_ur_permease PF00860.20 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_1 - 5.2e-52 176.9 15.8 6.1e-52 176.6 15.8 1.0 1 0 0 1 1 1 1 Permease family DUF1201 PF06716.11 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_1 - 0.029 14.4 1.3 0.092 12.8 1.3 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1201) TPPK_C PF12555.8 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_1 - 0.31 11.1 0.2 0.31 11.1 0.2 3.2 4 0 0 4 4 4 0 Thiamine pyrophosphokinase C terminal DUF2613 PF11021.8 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_1 - 2.9 8.1 9.5 19 5.4 3.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2613) DUF624 PF04854.14 NODE_35301_length_611_cov_95.885417_g28280_i0forward_frame_1 - 1.8 8.7 6.3 11 6.2 0.6 2.8 2 1 1 3 3 3 0 Protein of unknown function, DUF624 DUF1039 PF06287.11 NODE_35292_length_611_cov_186.788194_g28272_i0reverse_frame_1 - 0.027 14.9 2.0 11 6.6 0.0 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF1039) bHLH-MYC_N PF14215.6 NODE_35292_length_611_cov_186.788194_g28272_i0forward_frame_1 - 0.024 14.9 0.0 8.2 6.7 0.0 3.1 3 0 0 3 3 3 0 bHLH-MYC and R2R3-MYB transcription factors N-terminal Dna2 PF08696.11 NODE_35277_length_611_cov_4274.081597_g720_i8reverse_frame_1 - 0.011 15.5 2.7 0.033 14.0 2.7 1.8 1 1 0 1 1 1 0 DNA replication factor Dna2 Pro_sub2 PF18513.1 NODE_35277_length_611_cov_4274.081597_g720_i8reverse_frame_1 - 0.019 15.1 0.6 0.019 15.1 0.6 2.0 2 0 0 2 2 2 0 Prodomain subtilisin 2 FAM184 PF15665.5 NODE_35277_length_611_cov_4274.081597_g720_i8reverse_frame_1 - 0.17 11.6 14.6 0.15 11.8 7.1 2.0 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B RNA_pol_A_CTD PF03118.15 NODE_35277_length_611_cov_4274.081597_g720_i8forward_frame_1 - 0.064 13.0 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain TRIQK PF15168.6 NODE_35266_length_612_cov_27.154246_g28251_i0reverse_frame_1 - 0.13 12.2 2.0 0.37 10.7 0.7 2.2 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family Rota_NS6 PF04866.12 NODE_35266_length_612_cov_27.154246_g28251_i0reverse_frame_1 - 0.23 11.7 6.3 0.53 10.5 2.4 2.9 2 1 1 3 3 3 0 Rotavirus non-structural protein 6 PPR_2 PF13041.6 NODE_35252_length_612_cov_103.561525_g28238_i0reverse_frame_1 - 9.8e-11 41.7 0.5 0.0013 18.9 0.0 3.4 3 1 0 3 3 3 3 PPR repeat family PPR PF01535.20 NODE_35252_length_612_cov_103.561525_g28238_i0reverse_frame_1 - 5.5e-07 29.4 6.9 0.028 14.7 0.2 4.4 4 1 0 4 4 4 2 PPR repeat PPR_3 PF13812.6 NODE_35252_length_612_cov_103.561525_g28238_i0reverse_frame_1 - 1.2e-06 28.5 0.0 0.0016 18.5 0.0 2.6 2 1 1 3 3 3 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_35252_length_612_cov_103.561525_g28238_i0reverse_frame_1 - 0.86 9.4 4.6 4.6 7.0 0.0 3.5 4 0 0 4 4 4 0 PPR repeat DUF2237 PF09996.9 NODE_35252_length_612_cov_103.561525_g28238_i0forward_frame_1 - 0.019 14.9 0.0 0.034 14.1 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2237) LRRNT PF01462.18 NODE_35244_length_612_cov_169.894281_g25576_i1reverse_frame_1 - 0.16 11.7 4.8 0.12 12.0 2.0 2.3 2 0 0 2 2 2 0 Leucine rich repeat N-terminal domain AAA_11 PF13086.6 NODE_35229_length_613_cov_2.240484_g28222_i0reverse_frame_2 - 4.9e-08 33.1 0.2 7.2e-08 32.5 0.2 1.2 1 0 0 1 1 1 1 AAA domain DUF1774 PF08611.10 NODE_35225_length_613_cov_4.385813_g28218_i0reverse_frame_3 - 0.14 12.5 5.0 0.037 14.4 1.7 1.7 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF1774) DuoxA PF10204.9 NODE_35224_length_613_cov_54.548443_g28217_i0forward_frame_3 - 0.012 14.6 1.9 0.012 14.6 1.9 1.5 2 0 0 2 2 2 0 Dual oxidase maturation factor DUF535 PF04393.13 NODE_35221_length_613_cov_59.562284_g28214_i0forward_frame_3 - 0.0049 16.2 1.7 0.0077 15.5 1.0 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF535) Mesd PF10185.9 NODE_35218_length_613_cov_69.617647_g28211_i0reverse_frame_3 - 0.0027 17.7 2.3 0.0038 17.2 2.3 1.3 1 0 0 1 1 1 1 Chaperone for wingless signalling and trafficking of LDL receptor AP3D1 PF06375.11 NODE_35218_length_613_cov_69.617647_g28211_i0reverse_frame_2 - 2.1 8.6 11.5 3.4 7.9 11.5 1.5 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF3302 PF11742.8 NODE_35218_length_613_cov_69.617647_g28211_i0forward_frame_2 - 0.14 12.3 3.0 3.5 7.8 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3302) DUF5482 PF17579.2 NODE_35195_length_613_cov_261.467128_g28188_i0reverse_frame_2 - 0.11 12.3 0.3 0.16 11.8 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5482) Inhibitor_Mig-6 PF11555.8 NODE_35195_length_613_cov_261.467128_g28188_i0forward_frame_3 - 0.44 10.7 3.2 3.8 7.7 1.0 2.4 2 0 0 2 2 2 0 EGFR receptor inhibitor Mig-6 CBP_BcsR PF10945.8 NODE_35195_length_613_cov_261.467128_g28188_i0forward_frame_3 - 0.76 9.3 2.5 1.2 8.6 0.6 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsR FoP_duplication PF13865.6 NODE_35189_length_613_cov_465.728374_g28184_i0reverse_frame_3 - 1.8e-13 50.9 20.6 1.8e-13 50.9 20.6 4.2 2 1 1 3 3 3 1 C-terminal duplication domain of Friend of PRMT1 Imm5 PF14423.6 NODE_35170_length_614_cov_42.264249_g28168_i0reverse_frame_2 - 0.99 9.6 4.8 4.2 7.6 4.8 2.0 1 1 0 1 1 1 0 Immunity protein Imm5 SHIPPO-rpt PF07004.12 NODE_35158_length_614_cov_88.371330_g28156_i0forward_frame_3 - 0.00036 21.3 5.6 0.073 14.0 0.6 2.5 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat SHIPPO-rpt PF07004.12 NODE_35158_length_614_cov_88.371330_g28156_i0forward_frame_2 - 0.11 13.4 0.4 0.11 13.4 0.4 1.9 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat DUF1691 PF07950.11 NODE_35153_length_614_cov_99.151986_g28151_i0reverse_frame_3 - 0.093 13.5 0.0 0.17 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1691) DUF2946 PF11162.8 NODE_35153_length_614_cov_99.151986_g28151_i0forward_frame_2 - 0.011 16.4 4.2 0.015 15.9 4.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2946) ECSCR PF15820.5 NODE_35146_length_614_cov_144.321244_g28144_i0reverse_frame_3 - 0.0029 17.4 2.5 0.13 12.1 0.1 2.8 3 0 0 3 3 3 2 Endothelial cell-specific chemotaxis regulator YajC PF02699.15 NODE_35146_length_614_cov_144.321244_g28144_i0forward_frame_2 - 0.36 10.8 2.8 0.65 9.9 2.8 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit 60KD_IMP PF02096.20 NODE_35133_length_614_cov_2219.640760_g28135_i0forward_frame_3 - 0.048 13.6 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 60Kd inner membrane protein FoP_duplication PF13865.6 NODE_35133_length_614_cov_2219.640760_g28135_i0forward_frame_2 - 0.00036 21.0 27.2 0.004 17.7 27.1 2.4 1 1 0 1 1 1 1 C-terminal duplication domain of Friend of PRMT1 DUF4160 PF13711.6 NODE_35121_length_615_cov_72.036207_g28124_i0reverse_frame_2 - 0.13 12.6 0.5 0.29 11.5 0.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4160) tRNA-synt_1 PF00133.22 NODE_35121_length_615_cov_72.036207_g28124_i0forward_frame_3 - 4.5e-13 48.3 0.0 5.3e-13 48.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) DUF4614 PF15391.6 NODE_35121_length_615_cov_72.036207_g28124_i0forward_frame_3 - 0.19 11.7 0.2 0.3 11.1 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) MG1 PF17790.1 NODE_35120_length_615_cov_73.386207_g28123_i0reverse_frame_2 - 0.68 10.4 5.1 0.14 12.6 1.1 2.0 2 1 0 2 2 2 0 Macroglobulin domain MG1 DUF4407 PF14362.6 NODE_35107_length_615_cov_112.870690_g28112_i0reverse_frame_3 - 0.041 13.2 8.2 0.054 12.8 8.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) WD40_alt PF14077.6 NODE_35107_length_615_cov_112.870690_g28112_i0reverse_frame_3 - 0.068 13.0 1.1 13 5.7 0.2 2.8 2 1 0 2 2 2 0 Alternative WD40 repeat motif DUF1804 PF08822.11 NODE_35107_length_615_cov_112.870690_g28112_i0reverse_frame_3 - 0.078 13.0 0.3 0.078 13.0 0.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1804) DUF848 PF05852.11 NODE_35107_length_615_cov_112.870690_g28112_i0reverse_frame_3 - 0.087 12.9 13.2 0.12 12.5 4.8 2.2 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) DHHA1 PF02272.19 NODE_35107_length_615_cov_112.870690_g28112_i0reverse_frame_3 - 0.16 12.4 4.5 0.33 11.4 4.5 1.5 1 0 0 1 1 1 0 DHHA1 domain DUF2120 PF09893.9 NODE_35107_length_615_cov_112.870690_g28112_i0reverse_frame_3 - 0.35 11.0 9.4 3.8 7.6 0.3 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) DUF4375 PF14300.6 NODE_35107_length_615_cov_112.870690_g28112_i0reverse_frame_3 - 0.5 10.6 3.7 0.49 10.7 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4375) SlyX PF04102.12 NODE_35107_length_615_cov_112.870690_g28112_i0reverse_frame_3 - 1.7 9.3 8.7 0.59 10.8 1.1 3.4 3 1 0 3 3 3 0 SlyX NeuB PF03102.14 NODE_35107_length_615_cov_112.870690_g28112_i0forward_frame_3 - 0.23 10.9 1.3 0.34 10.3 1.3 1.3 1 0 0 1 1 1 0 NeuB family zf_PR_Knuckle PF18445.1 NODE_35091_length_615_cov_419.046552_g28098_i0forward_frame_2 - 0.088 12.6 0.6 0.088 12.6 0.6 2.1 2 0 0 2 2 2 0 PR zinc knuckle motif Fucose_iso_C PF02952.17 ORF9958 - 0.067 12.9 0.1 0.096 12.4 0.1 1.3 1 0 0 1 1 1 0 L-fucose isomerase, C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks113.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks113.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks113.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks113.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:04:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L15e PF00827.17 ORF93359 - 1.6e-87 292.2 9.9 1.8e-87 292.0 9.9 1.0 1 0 0 1 1 1 1 Ribosomal L15 Dsh_C PF12316.8 ORF9041 - 0.74 10.2 9.9 0.91 9.9 9.9 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Macoilin PF09726.9 ORF9041 - 5.8 5.3 13.3 6 5.3 13.3 1.0 1 0 0 1 1 1 0 Macoilin family GyrI-like PF06445.15 ORF88200 - 9.7e-31 107.2 0.0 1.1e-30 107.0 0.0 1.0 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 ORF88200 - 3.3e-07 30.6 0.0 3.8e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Integron-associated effector binding protein TRAM_LAG1_CLN8 PF03798.16 ORF86588 - 6.1e-10 39.2 7.9 6.8e-10 39.0 7.9 1.1 1 0 0 1 1 1 1 TLC domain BCIP PF13862.6 ORF86398 - 0.11 12.2 2.2 0.16 11.8 2.2 1.2 1 0 0 1 1 1 0 p21-C-terminal region-binding protein IQ PF00612.27 ORF86398 - 0.38 10.7 0.1 0.38 10.7 0.1 4.4 5 0 0 5 5 5 0 IQ calmodulin-binding motif OppC_N PF12911.7 ORF86398 - 0.59 10.1 0.1 0.59 10.1 0.1 2.6 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C U3_snoRNA_assoc PF08297.11 ORF86398 - 5 7.9 11.1 1.7 9.4 7.9 2.0 2 1 1 3 3 3 0 U3 snoRNA associated DUF1375 PF07119.12 ORF84243 - 2.7e-07 30.9 0.3 5.2e-07 30.0 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1375) His_Phos_1 PF00300.22 ORF82735 - 2.1e-15 56.9 0.0 4.1e-15 56.0 0.0 1.5 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) zf-RING_UBOX PF13445.6 ORF82425 - 3.5e-07 30.2 5.4 3.5e-07 30.2 5.4 2.6 3 0 0 3 3 3 1 RING-type zinc-finger zf-B_box PF00643.24 ORF82425 - 5.2e-07 29.7 5.7 5.2e-07 29.7 5.7 4.0 4 0 0 4 4 4 1 B-box zinc finger zf-RING_5 PF14634.6 ORF82425 - 1.8e-06 27.8 5.6 1.8e-06 27.8 5.6 2.5 2 1 0 2 2 2 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF82425 - 3e-06 27.5 7.2 3e-06 27.5 7.2 2.6 2 1 0 2 2 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF82425 - 2.2e-05 24.2 6.7 2.2e-05 24.2 6.7 3.2 2 2 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF82425 - 3.3e-05 23.9 4.8 3.3e-05 23.9 4.8 3.1 2 2 0 2 2 2 1 zinc finger of C3HC4-type, RING PhnA_Zn_Ribbon PF08274.12 ORF82425 - 0.00049 20.0 7.8 0.00098 19.0 1.3 3.4 3 0 0 3 3 3 1 PhnA Zinc-Ribbon zf-C3HC4_2 PF13923.6 ORF82425 - 0.00052 19.8 8.6 0.00052 19.8 8.6 3.0 2 2 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF82425 - 0.0093 15.8 3.4 0.0093 15.8 3.4 3.2 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 Gly-rich_Ago1 PF12764.7 ORF82425 - 0.011 16.5 0.2 0.016 16.0 0.2 1.2 1 0 0 1 1 1 0 Glycine-rich region of argonaut Prok-RING_1 PF14446.6 ORF82425 - 0.018 15.0 4.1 0.018 15.0 4.1 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zf-UBR PF02207.20 ORF82425 - 0.035 14.3 17.0 0.053 13.7 5.4 2.8 2 2 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) zinc_ribbon_2 PF13240.6 ORF82425 - 0.71 9.7 0.1 0.71 9.7 0.1 4.8 5 2 0 5 5 5 0 zinc-ribbon domain UPF0547 PF10571.9 ORF82425 - 1 9.5 0.1 1 9.5 0.1 3.0 3 0 0 3 3 2 0 Uncharacterised protein family UPF0547 zf-RING_4 PF14570.6 ORF82425 - 1.4 8.8 15.8 0.24 11.2 9.1 2.9 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 ORF82425 - 7.1 6.7 8.0 2.2 8.3 0.3 2.8 2 1 1 3 3 3 0 Transposase zinc-ribbon domain RicinB_lectin_2 PF14200.6 ORF81654 - 0.039 14.7 0.0 0.11 13.2 0.0 1.7 2 0 0 2 2 2 0 Ricin-type beta-trefoil lectin domain-like FRG1 PF06229.12 ORF81654 - 0.11 12.2 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 FRG1-like domain DUF5477 PF17571.2 ORF79600 - 0.017 15.3 2.1 0.02 15.1 0.4 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5477) DUF5477 PF17571.2 ORF79598 - 0.017 15.3 2.1 0.02 15.1 0.4 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5477) Pkinase PF00069.25 ORF74048 - 4.3e-60 203.3 0.2 4.9e-60 203.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF74048 - 3e-29 102.1 0.0 3.3e-29 102.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF74048 - 2.7e-10 40.1 0.0 3.2e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF74048 - 7.6e-08 32.0 0.0 1.3e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF74048 - 5.5e-06 25.6 0.1 6.5e-06 25.3 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF74048 - 0.00048 20.1 0.1 0.0019 18.2 0.1 1.7 1 1 1 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF74048 - 0.00055 19.6 1.0 0.0019 17.8 0.2 2.1 1 1 1 2 2 2 1 Choline/ethanolamine kinase RIO1 PF01163.22 ORF74048 - 0.0015 18.1 0.1 0.0023 17.5 0.1 1.3 1 0 0 1 1 1 1 RIO1 family FTA2 PF13095.6 ORF74048 - 0.044 13.4 0.0 0.073 12.7 0.0 1.3 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF74048 - 0.21 10.3 0.0 0.26 10.0 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase DUF3175 PF11373.8 ORF73514 - 0.034 14.3 1.4 0.05 13.8 0.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3175) Ank_4 PF13637.6 ORF72383 - 7.6e-06 26.4 0.1 0.0042 17.6 0.0 3.3 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF72383 - 4.1e-05 23.8 0.1 0.14 12.7 0.1 3.8 4 0 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF72383 - 6.7e-05 23.0 0.3 0.037 14.6 0.0 3.5 4 1 0 4 4 4 1 Ankyrin repeat Ank_2 PF12796.7 ORF72383 - 8.7e-05 23.0 0.0 0.00024 21.6 0.0 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF72383 - 0.0092 16.3 0.0 0.84 10.0 0.0 2.6 2 0 0 2 2 2 1 Ankyrin repeats (many copies) EMC3_TMCO1 PF01956.16 ORF72196 - 0.41 10.4 5.7 0.48 10.2 4.7 1.6 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DivIC PF04977.15 ORF72196 - 5.2 6.9 7.5 3.7 7.4 1.4 2.8 3 0 0 3 3 3 0 Septum formation initiator FKBP_C PF00254.28 ORF70981 - 2.2e-13 50.3 0.0 3.4e-13 49.7 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Ribosomal_L15e PF00827.17 ORF70637 - 1.6e-87 292.2 9.9 1.8e-87 292.0 9.9 1.0 1 0 0 1 1 1 1 Ribosomal L15 Porin_2 PF02530.14 ORF68525 - 0.036 13.3 0.2 0.044 13.1 0.2 1.1 1 0 0 1 1 1 0 Porin subfamily KH_1 PF00013.29 ORF68463 - 0.0012 18.6 0.0 0.002 17.9 0.0 1.3 1 0 0 1 1 1 1 KH domain DUF1476 PF07345.11 ORF66589 - 0.078 13.4 7.3 51 4.3 0.1 5.4 1 1 6 7 7 7 0 ATPase inhibitor subunit zeta HalX PF08663.10 ORF66589 - 0.11 12.8 4.8 2.6 8.4 0.3 2.1 1 1 1 2 2 2 0 HalX domain Spermine_synth PF01564.17 ORF6641 - 0.045 13.2 0.0 0.064 12.7 0.0 1.2 1 0 0 1 1 1 0 Spermine/spermidine synthase domain Peripla_BP_2 PF01497.18 ORF6570 - 3.1e-24 85.9 0.1 3.5e-24 85.7 0.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein UQ_con PF00179.26 ORF65339 - 3.3e-49 166.2 0.1 4.1e-49 165.8 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UBA PF00627.31 ORF65339 - 6e-13 48.4 0.1 1.4e-12 47.2 0.1 1.6 1 0 0 1 1 1 1 UBA/TS-N domain Prok-E2_B PF14461.6 ORF65339 - 3e-05 23.7 0.0 5.1e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF65339 - 0.0021 18.3 0.3 0.0037 17.6 0.3 1.7 1 1 0 1 1 1 1 RWD domain UEV PF05743.13 ORF65339 - 0.057 13.3 0.0 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 UEV domain GRAM PF02893.20 ORF63072 - 0.013 15.3 0.0 0.066 13.1 0.0 1.9 2 1 0 2 2 2 0 GRAM domain GPI-anchored PF10342.9 ORF60705 - 0.11 13.3 0.0 2 9.3 0.0 2.3 1 1 1 2 2 2 0 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family Sec8_exocyst PF04048.14 ORF59439 - 0.37 10.7 9.1 0.51 10.2 1.9 2.5 1 1 2 3 3 3 0 Sec8 exocyst complex component specific domain Fimbrial_PilY2 PF14481.6 ORF56756 - 0.034 13.8 0.0 0.057 13.1 0.0 1.3 1 0 0 1 1 1 0 Type 4 fimbrial biogenesis protein PilY2 Ras PF00071.22 ORF56723 - 1.5e-65 219.8 1.4 1.7e-65 219.5 1.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF56723 - 3.3e-36 124.1 0.3 3.3e-36 124.1 0.3 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF56723 - 4.1e-19 68.7 0.4 5.5e-19 68.3 0.4 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF56723 - 1.8e-07 31.2 0.4 3.4e-07 30.3 0.1 1.6 1 1 1 2 2 2 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF56723 - 7.2e-06 26.0 2.8 0.019 14.9 0.1 2.3 1 1 1 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 ORF56723 - 1.4e-05 24.6 0.3 2e-05 24.0 0.3 1.3 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF56723 - 0.0001 21.8 0.2 0.00013 21.5 0.2 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF56723 - 0.00017 21.2 1.0 0.00037 20.1 1.0 1.6 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF56723 - 0.00026 20.6 0.2 0.0022 17.6 0.2 2.2 1 1 0 1 1 1 1 Ferrous iron transport protein B Orbi_VP5 PF00901.17 ORF56723 - 0.0028 16.1 0.2 0.0035 15.8 0.2 1.2 1 0 0 1 1 1 1 Orbivirus outer capsid protein VP5 AAA_16 PF13191.6 ORF56723 - 0.0087 16.5 0.0 0.012 16.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF56723 - 0.013 15.5 0.2 0.081 12.9 0.0 2.1 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF56723 - 0.016 15.4 0.0 0.2 11.9 0.0 2.3 1 1 0 2 2 2 0 AAA domain AAA PF00004.29 ORF56723 - 0.02 15.3 0.1 0.071 13.5 0.0 1.9 1 1 1 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 ORF56723 - 0.03 14.1 2.9 0.13 11.9 2.9 2.1 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF56723 - 0.031 14.0 0.0 0.079 12.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 ORF56723 - 0.073 12.6 0.0 0.19 11.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 ORF56723 - 0.24 11.9 2.1 0.61 10.6 2.1 1.9 1 1 0 1 1 1 0 ABC transporter Sugar_tr PF00083.24 ORF56653 - 7.3e-61 206.4 15.2 8.1e-61 206.2 15.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF56653 - 3.7e-14 52.4 14.1 4e-14 52.3 14.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily SHR3_chaperone PF08229.11 ORF56653 - 0.00045 19.3 2.0 0.0014 17.7 1.9 1.8 1 1 0 1 1 1 1 ER membrane protein SH3 DUF2070 PF09843.9 ORF56653 - 4.3 5.5 8.4 5.7 5.1 8.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Zip PF02535.22 ORF56233 - 1.1 8.5 5.6 1 8.5 5.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF56233 - 1.2 7.8 9.8 1.4 7.6 9.8 1.2 1 0 0 1 1 1 0 Presenilin Band_3_cyto PF07565.13 ORF56233 - 2.1 8.1 8.4 3.6 7.3 8.4 1.3 1 0 0 1 1 1 0 Band 3 cytoplasmic domain Pkinase PF00069.25 ORF55408 - 4.3e-60 203.3 0.2 4.9e-60 203.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF55408 - 3e-29 102.1 0.0 3.3e-29 102.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF55408 - 2.7e-10 40.1 0.0 3.2e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF55408 - 7.6e-08 32.0 0.0 1.3e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF55408 - 5.5e-06 25.6 0.1 6.5e-06 25.3 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF55408 - 0.00048 20.1 0.1 0.0019 18.2 0.1 1.7 1 1 1 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF55408 - 0.00055 19.6 1.0 0.0019 17.8 0.2 2.1 1 1 1 2 2 2 1 Choline/ethanolamine kinase RIO1 PF01163.22 ORF55408 - 0.0015 18.1 0.1 0.0023 17.5 0.1 1.3 1 0 0 1 1 1 1 RIO1 family FTA2 PF13095.6 ORF55408 - 0.044 13.4 0.0 0.073 12.7 0.0 1.3 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF55408 - 0.21 10.3 0.0 0.26 10.0 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase zf-RING_2 PF13639.6 ORF54731 - 2.9e-12 46.7 10.1 4.7e-12 46.1 10.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF54731 - 5.2e-10 38.9 6.6 8.6e-10 38.2 6.6 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF54731 - 2.3e-07 31.0 9.8 8e-07 29.3 9.8 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF54731 - 5.4e-07 29.3 9.1 9.2e-07 28.6 9.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF54731 - 4.8e-06 26.5 8.3 7.8e-06 25.8 8.3 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF54731 - 8.1e-06 25.6 8.2 1.4e-05 24.9 8.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF54731 - 1.6e-05 24.7 7.9 2.4e-05 24.2 7.9 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF54731 - 0.0015 18.6 4.0 0.0025 17.8 4.0 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF54731 - 0.0031 17.1 6.8 0.0062 16.1 6.8 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_3 PF13920.6 ORF54731 - 0.019 14.8 7.5 0.03 14.2 7.5 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-CCHC_6 PF15288.6 ORF54731 - 0.021 14.7 0.8 0.053 13.4 0.8 1.7 1 0 0 1 1 1 0 Zinc knuckle FANCL_C PF11793.8 ORF54731 - 0.045 13.9 3.6 0.085 13.1 3.6 1.4 1 0 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 ORF54731 - 0.048 13.8 5.3 0.1 12.8 5.3 1.5 1 1 0 1 1 1 0 RING-variant domain zf-C3HC4_4 PF15227.6 ORF54731 - 0.15 12.2 4.7 0.32 11.2 4.7 1.5 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-Nse PF11789.8 ORF54731 - 0.23 11.3 4.5 0.39 10.6 4.5 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Prok-RING_4 PF14447.6 ORF54731 - 1.7 8.5 7.9 3.1 7.7 7.9 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 DUF1539 PF07560.11 ORF54277 - 0.014 15.5 1.2 0.36 10.9 0.1 2.3 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1539) EF-hand_8 PF13833.6 ORF53955 - 0.0002 21.1 0.0 0.00035 20.4 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair Synaptobrevin PF00957.21 ORF52921 - 3.2e-15 55.7 0.4 5e-15 55.1 0.4 1.3 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 ORF52921 - 0.00063 19.7 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 Regulated-SNARE-like domain Oxysterol_BP PF01237.18 ORF50460 - 1.3e-20 73.6 0.0 1.6e-20 73.3 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein PfkB PF00294.24 ORF50002 - 1.2e-33 116.7 0.4 1.4e-33 116.5 0.4 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF50002 - 4.6e-13 49.1 0.1 6.3e-13 48.7 0.1 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase HTH_29 PF13551.6 ORF50002 - 0.013 15.5 0.0 0.038 14.0 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn helix DUF1476 PF07345.11 ORF48523 - 0.078 13.4 7.3 51 4.3 0.1 5.4 1 1 6 7 7 7 0 ATPase inhibitor subunit zeta HalX PF08663.10 ORF48523 - 0.11 12.8 4.8 2.6 8.4 0.3 2.1 1 1 1 2 2 2 0 HalX domain SIN1 PF05422.12 ORF48226 - 0.051 14.1 0.2 0.073 13.6 0.2 1.4 1 0 0 1 1 1 0 Stress-activated map kinase interacting protein 1 (SIN1) Pedibin PF08182.11 ORF47695 - 0.14 12.0 6.5 0.35 10.7 3.0 2.7 2 0 0 2 2 2 0 Pedibin/Hym-346 family Zwint PF15556.6 ORF47695 - 0.61 9.5 8.1 1.5 8.2 8.2 1.6 1 1 0 1 1 1 0 ZW10 interactor IMD PF08397.11 ORF47695 - 1.1 8.5 11.5 1.7 7.9 11.1 1.4 1 1 0 1 1 1 0 IRSp53/MIM homology domain Tho2 PF11262.8 ORF47695 - 1.3 8.1 15.1 2.2 7.4 15.1 1.5 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Atg14 PF10186.9 ORF47695 - 1.9 7.5 13.1 2.3 7.2 13.1 1.2 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF16 PF01519.16 ORF47695 - 3.3 8.2 13.2 2.5 8.6 11.2 1.9 1 1 0 1 1 1 0 Protein of unknown function DUF16 ACCA PF03255.14 ORF47695 - 4.8 7.1 12.3 0.97 9.3 7.1 2.2 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PKcGMP_CC PF16808.5 ORF47695 - 7.8 6.4 17.0 0.58 10.1 9.0 2.9 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Malic_M PF03949.15 ORF47213 - 5.6e-12 45.5 0.0 3.5e-11 42.9 0.0 1.9 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain DUF1476 PF07345.11 ORF45901 - 0.078 13.4 7.3 51 4.3 0.1 5.4 1 1 6 7 7 7 0 ATPase inhibitor subunit zeta HalX PF08663.10 ORF45901 - 0.11 12.8 4.8 2.6 8.4 0.3 2.1 1 1 1 2 2 2 0 HalX domain Thyroglobulin_1 PF00086.18 ORF42517 - 0.0079 15.9 1.7 0.015 14.9 1.7 1.6 1 0 0 1 1 1 1 Thyroglobulin type-1 repeat HCMV_UL139 PF12507.8 ORF40030 - 0.036 14.4 2.7 4.1 7.8 0.1 2.2 2 0 0 2 2 2 0 Human Cytomegalovirus UL139 protein VSG_B PF13206.6 ORF40030 - 0.064 12.5 1.2 0.081 12.2 1.2 1.3 1 0 0 1 1 1 0 Trypanosomal VSG domain WXG100 PF06013.12 ORF40030 - 0.54 10.5 5.5 3.8 7.8 0.7 2.8 3 0 0 3 3 3 0 Proteins of 100 residues with WXG DUF5082 PF16888.5 ORF40030 - 0.55 10.5 7.6 0.66 10.3 0.6 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) OmpH PF03938.14 ORF40030 - 4 7.8 16.8 5.4 7.4 2.7 2.2 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Cep57_MT_bd PF06657.13 ORF40030 - 7.9 7.0 11.9 0.45 11.0 1.6 2.5 2 1 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 ROK PF00480.20 ORF3827 - 0.15 11.5 0.2 0.19 11.2 0.2 1.1 1 0 0 1 1 1 0 ROK family Sox_N PF12444.8 ORF36995 - 0.11 13.7 2.9 1.5 10.0 0.1 2.5 2 1 0 2 2 2 0 Sox developmental protein N terminal GPS PF01825.21 ORF35726 - 0.098 13.2 1.3 0.098 13.2 1.3 2.2 2 0 0 2 2 2 0 GPCR proteolysis site, GPS, motif Reo_P9 PF06043.11 ORF30356 - 0.13 11.7 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Reovirus P9-like family NAC PF01849.18 ORF27911 - 5e-16 58.4 0.0 1.2e-15 57.2 0.0 1.7 1 0 0 1 1 1 1 NAC domain YqzE PF14038.6 ORF27911 - 0.34 10.9 2.9 0.84 9.7 2.9 1.6 1 0 0 1 1 1 0 YqzE-like protein DUF4637 PF15470.6 ORF27911 - 0.48 10.1 5.7 0.5 10.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4637) DUF3391 PF11871.8 ORF27911 - 1.1 9.8 8.6 1.8 9.1 1.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) SPOR PF05036.13 ORF25155 - 1.5e-17 63.7 0.6 6.3e-17 61.7 0.0 2.1 2 0 0 2 2 2 1 Sporulation related domain DUF4551 PF15087.6 ORF25155 - 0.19 10.6 9.5 0.2 10.4 9.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) FAM60A PF15396.6 ORF25155 - 0.88 9.5 4.4 1.2 9.1 4.4 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Presenilin PF01080.17 ORF25155 - 5.4 5.7 10.7 5.5 5.6 10.7 1.1 1 0 0 1 1 1 0 Presenilin TFIIA PF03153.13 ORF25155 - 6.5 6.6 25.2 6.9 6.5 25.2 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit PAN_4 PF14295.6 ORF23623 - 1.9 8.5 11.0 0.33 10.9 5.6 2.3 2 0 0 2 2 2 0 PAN domain RCC1_2 PF13540.6 ORF224 - 3.7e-09 36.2 12.3 0.23 11.3 0.1 4.9 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF224 - 0.0021 18.4 1.4 14 6.1 0.1 3.8 1 1 2 3 3 3 2 TFIIH p62 subunit, N-terminal domain Cerato-platanin PF07249.12 ORF224 - 0.33 11.1 7.2 11 6.2 0.3 3.6 1 1 2 4 4 4 0 Cerato-platanin DUF5477 PF17571.2 ORF20865 - 0.017 15.3 2.1 0.02 15.1 0.4 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5477) DUF4290 PF14123.6 ORF2073 - 0.04 13.5 0.0 0.098 12.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4290) Peptidase_C48 PF02902.19 ORF18804 - 6.4e-12 45.8 3.3 3.6e-11 43.3 3.3 1.9 1 1 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain RNase_J_C PF17770.1 ORF152605 - 0.012 16.6 4.4 0.14 13.3 1.2 2.4 1 1 1 2 2 2 0 Ribonuclease J C-terminal domain Peptidase_M10 PF00413.24 ORF152605 - 0.024 14.5 0.8 0.038 13.8 0.8 1.4 1 0 0 1 1 1 0 Matrixin ISG65-75 PF11727.8 ORF152605 - 0.029 13.6 1.5 0.039 13.2 1.5 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein SHE3 PF17078.5 ORF152605 - 0.074 12.7 9.6 0.29 10.8 9.6 2.0 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 PIN_8 PF18476.1 ORF152605 - 0.076 12.9 8.7 0.087 12.7 7.5 1.6 1 1 1 2 2 2 0 PIN like domain Fib_alpha PF08702.10 ORF152605 - 0.13 12.4 9.1 0.17 12.1 8.4 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Tweety PF04906.13 ORF152605 - 0.21 10.2 1.9 0.24 10.0 0.9 1.6 1 1 0 1 1 1 0 Tweety HIP1_clath_bdg PF16515.5 ORF152605 - 0.23 12.1 5.4 0.14 12.8 2.6 2.1 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF1525 PF07511.11 ORF152605 - 0.25 11.5 2.0 3.3 7.9 0.1 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF1525) DUF948 PF06103.11 ORF152605 - 0.31 11.3 4.0 0.64 10.3 1.9 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) FlaC_arch PF05377.11 ORF152605 - 0.33 11.4 5.1 3.1 8.3 0.1 3.5 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) HSCB_C PF07743.13 ORF152605 - 6.7 7.3 10.2 11 6.6 4.1 3.6 1 1 2 3 3 3 0 HSCB C-terminal oligomerisation domain Endothelin PF00322.17 ORF151716 - 0.033 13.8 1.4 0.085 12.5 1.4 1.7 1 0 0 1 1 1 0 Endothelin family Response_reg PF00072.24 ORF147025 - 2e-24 85.9 0.0 3e-24 85.4 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain GerE PF00196.19 ORF147025 - 4.4e-23 80.6 0.1 7.2e-23 79.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 ORF147025 - 3.1e-05 23.5 0.7 0.00013 21.6 0.1 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_Tnp_ISL3 PF13542.6 ORF147025 - 5.3e-05 22.5 0.0 0.00012 21.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 ORF147025 - 0.0002 21.1 0.0 0.0005 19.8 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 ORF147025 - 0.00025 21.1 0.9 0.00073 19.6 0.0 2.3 2 1 1 3 3 2 1 Helix-turn-helix domain HTH_24 PF13412.6 ORF147025 - 0.00064 19.2 0.0 0.0016 18.0 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 ORF147025 - 0.0018 18.0 0.0 0.0041 16.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 ORF147025 - 0.0019 18.2 0.0 0.0052 16.8 0.0 1.8 1 1 0 1 1 1 1 Winged helix-turn helix Terminase_5 PF06056.12 ORF147025 - 0.0027 17.6 0.0 0.0051 16.7 0.0 1.4 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_Tnp_1 PF01527.20 ORF147025 - 0.0034 17.6 0.1 0.0072 16.6 0.1 1.5 1 0 0 1 1 1 1 Transposase HTH_40 PF14493.6 ORF147025 - 0.0039 17.6 0.0 0.0066 16.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 ORF147025 - 0.0054 16.8 0.0 0.011 15.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_5 PF01022.20 ORF147025 - 0.009 15.9 1.2 0.019 14.8 0.0 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Sigma70_r4 PF04545.16 ORF147025 - 0.013 15.0 0.1 0.044 13.3 0.1 1.9 1 1 0 1 1 1 0 Sigma-70, region 4 Sigma70_ECF PF07638.11 ORF147025 - 0.017 15.1 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 ECF sigma factor HTH_IclR PF09339.10 ORF147025 - 0.025 14.4 0.3 0.061 13.1 0.0 1.8 2 0 0 2 2 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 ORF147025 - 0.033 14.1 0.0 0.081 12.8 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_AsnC-type PF13404.6 ORF147025 - 0.042 13.7 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 ORF147025 - 0.053 13.6 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 ORF147025 - 0.077 12.8 0.1 0.29 11.0 0.1 2.1 1 1 0 1 1 1 0 HTH DNA binding domain Cadherin_2 PF08266.12 ORF147025 - 0.14 12.0 0.1 0.23 11.3 0.1 1.4 1 0 0 1 1 1 0 Cadherin-like HTH_11 PF08279.12 ORF147025 - 0.14 12.1 0.0 0.89 9.6 0.0 2.1 1 1 0 1 1 1 0 HTH domain HTH_AraC PF00165.23 ORF147025 - 0.15 12.2 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family TnsD PF15978.5 ORF147025 - 0.2 10.6 0.0 0.26 10.2 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D Pkinase PF00069.25 ORF146123 - 7.1e-07 28.8 0.0 9.6e-07 28.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DUF538 PF04398.12 ORF146123 - 0.045 14.2 0.0 0.068 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF538 DUF3175 PF11373.8 ORF146096 - 0.034 14.3 1.4 0.05 13.8 0.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3175) Lipase_3 PF01764.25 ORF138815 - 2e-18 66.6 0.0 3.1e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 ORF138815 - 0.0075 16.0 0.0 0.0094 15.7 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 ORF138815 - 0.043 13.7 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF138815 - 0.057 12.9 0.0 0.076 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 ORF138815 - 0.099 11.9 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF824 PF05688.11 ORF138815 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) Abhydrolase_1 PF00561.20 ORF138815 - 0.12 12.0 0.0 0.25 10.9 0.0 1.5 2 0 0 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF138815 - 0.13 12.8 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase family Lipase_3 PF01764.25 ORF136296 - 2e-18 66.6 0.0 3.1e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 ORF136296 - 0.0075 16.0 0.0 0.0094 15.7 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 ORF136296 - 0.043 13.7 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF136296 - 0.057 12.9 0.0 0.076 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 ORF136296 - 0.099 11.9 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF824 PF05688.11 ORF136296 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) Abhydrolase_1 PF00561.20 ORF136296 - 0.12 12.0 0.0 0.25 10.9 0.0 1.5 2 0 0 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF136296 - 0.13 12.8 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase family Evr1_Alr PF04777.13 ORF134856 - 2.3e-19 69.7 0.1 5.8e-19 68.4 0.0 1.7 1 1 1 2 2 2 1 Erv1 / Alr family zinc-ribbons_6 PF07191.12 ORF134856 - 0.32 11.0 3.3 7 6.7 0.3 2.3 1 1 1 2 2 2 0 zinc-ribbons PIP5K PF01504.18 ORF134680 - 3.7e-38 131.3 0.7 7.4e-38 130.3 0.7 1.4 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase tRNA-synt_His PF13393.6 ORF134381 - 2.2e-17 63.3 0.1 3.7e-17 62.6 0.1 1.4 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 ORF134381 - 9.7e-16 57.7 0.1 1.3e-15 57.3 0.1 1.2 1 0 0 1 1 1 1 Anticodon binding domain HGTP_anticodon2 PF12745.7 ORF134381 - 1.2e-10 41.4 0.9 1.6e-10 41.0 0.9 1.1 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs HTH_23 PF13384.6 ORF134146 - 4.4e-06 26.3 0.3 1.2e-05 24.9 0.1 1.8 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 ORF134146 - 4.4e-05 23.5 0.0 0.00034 20.7 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.6 ORF134146 - 0.0018 18.3 0.1 0.0037 17.3 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn helix TnsD PF15978.5 ORF134146 - 0.0022 17.1 0.4 0.0027 16.8 0.4 1.2 1 0 0 1 1 1 1 Tn7-like transposition protein D HTH_Tnp_ISL3 PF13542.6 ORF134146 - 0.004 16.5 0.0 0.14 11.5 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 Pfk_N PF18468.1 ORF134146 - 0.043 14.2 0.1 0.14 12.6 0.1 1.8 1 1 1 2 2 2 0 Phosphofructokinase N-terminal domain yeast Sigma70_r4_2 PF08281.12 ORF134146 - 0.055 13.2 0.0 0.12 12.0 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Tnp_1 PF01527.20 ORF134146 - 0.11 12.8 0.1 0.18 12.1 0.1 1.4 1 0 0 1 1 1 0 Transposase HTH_3 PF01381.22 ORF134146 - 0.11 12.5 0.1 0.22 11.6 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix Phytochelatin PF05023.14 ORF134146 - 0.24 10.6 2.9 0.37 10.0 2.1 1.9 1 1 1 2 2 2 0 Phytochelatin synthase SsgA PF04686.12 ORF13108 - 0.053 13.5 0.0 0.13 12.2 0.0 1.6 1 1 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA DUF1974 PF09317.11 ORF13108 - 0.078 12.5 0.7 0.1 12.1 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) ATG16 PF08614.11 ORF13108 - 0.51 10.5 6.5 0.051 13.8 2.0 1.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF2975 PF11188.8 ORF12780 - 0.019 14.8 8.0 0.66 9.9 5.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) DUF3683 PF12447.8 ORF124736 - 0.2 11.8 2.7 0.15 12.2 0.3 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3683) Autophagy_N PF03986.13 ORF123746 - 2.4e-35 121.4 8.9 8.1e-35 119.7 8.9 1.8 1 1 0 1 1 1 1 Autophagocytosis associated protein (Atg3), N-terminal domain Autophagy_act_C PF03987.15 ORF123746 - 2.7e-05 24.7 0.1 5.3e-05 23.7 0.1 1.5 1 0 0 1 1 1 1 Autophagocytosis associated protein, active-site domain Astro_capsid_p PF12226.8 ORF123746 - 0.31 10.1 12.9 0.38 9.9 12.9 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein SID-1_RNA_chan PF13965.6 ORF123746 - 0.33 9.3 2.0 0.32 9.4 2.0 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 SDA1 PF05285.12 ORF123746 - 1 8.7 21.3 1.2 8.5 21.3 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF123746 - 1.7 6.7 20.5 2 6.5 20.5 1.0 1 0 0 1 1 1 0 Nop14-like family RRP7 PF12923.7 ORF123746 - 3.2 7.9 15.0 0.3 11.2 9.8 1.8 1 1 1 2 2 2 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain CDC45 PF02724.14 ORF123746 - 5.5 5.2 15.0 6.8 4.9 15.0 1.1 1 0 0 1 1 1 0 CDC45-like protein TRAP_alpha PF03896.16 ORF123746 - 7.7 5.6 10.9 13 4.9 10.9 1.4 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit BT1 PF03092.16 ORF123746 - 8.8 4.4 6.5 11 4.2 6.5 1.1 1 0 0 1 1 1 0 BT1 family DUF3301 PF11743.8 ORF12236 - 0.16 11.7 0.1 0.16 11.7 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3301) LolA PF03548.15 ORF121172 - 1e-58 197.7 4.1 1.2e-58 197.5 4.1 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein carrier protein LolA DUF2092 PF09865.9 ORF121172 - 1.6e-05 24.4 0.2 0.011 15.0 0.0 2.3 2 1 0 2 2 2 2 Predicted periplasmic protein (DUF2092) DUF1964 PF09244.10 ORF121172 - 0.0055 17.1 0.6 0.2 12.1 0.0 2.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1964) CBM_6 PF03422.15 ORF121172 - 0.04 14.2 0.4 0.069 13.5 0.4 1.4 1 0 0 1 1 1 0 Carbohydrate binding module (family 6) DUF3220 PF11516.8 ORF121172 - 0.055 13.7 0.2 0.1 12.8 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) DUF5024 PF16427.5 ORF121172 - 0.059 13.7 0.2 0.15 12.4 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5024) Ribosomal_L17 PF01196.19 ORF116509 - 1.9e-11 44.7 0.7 7.2e-11 42.8 0.1 2.0 2 0 0 2 2 2 1 Ribosomal protein L17 TraC PF07820.12 ORF116509 - 0.5 10.7 2.5 0.54 10.6 0.0 2.2 3 0 0 3 3 3 0 TraC-like protein Fer4_14 PF13394.6 ORF114939 - 8.8 6.5 7.0 26 5.0 0.1 3.2 3 0 0 3 3 3 0 4Fe-4S single cluster domain Pyrid_oxidase_2 PF13883.6 ORF114007 - 1.2e-28 100.2 0.0 1.4e-28 100.0 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 ORF114007 - 0.026 14.7 0.0 0.044 14.0 0.0 1.5 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase F1F0-ATPsyn_F PF10791.9 ORF112596 - 0.026 15.0 0.5 0.071 13.6 0.5 1.7 1 0 0 1 1 1 0 Mitochondrial F1-F0 ATP synthase subunit F of fungi DUF4188 PF13826.6 ORF112596 - 7.4 6.9 8.5 4.5 7.6 1.4 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4188) AKAP28 PF14469.6 ORF112330 - 0.057 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 28 kDa A-kinase anchor Comm PF15957.5 ORF111897 - 3.5 8.0 5.5 12 6.3 0.3 2.2 2 0 0 2 2 2 0 Commissureless zf-CDGSH PF09360.10 ORF110255 - 4.2e-12 46.1 6.8 3.2e-07 30.4 0.3 2.3 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type SAB PF04382.13 ORF108670 - 0.058 13.5 0.1 0.15 12.1 0.1 1.7 1 0 0 1 1 1 0 SAB domain EF-hand_6 PF13405.6 ORF107454 - 0.029 14.3 0.1 0.14 12.2 0.1 2.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 ORF107454 - 0.11 12.2 0.7 0.33 10.6 0.1 2.2 2 0 0 2 2 2 0 EF hand adh_short PF00106.25 ORF107411 - 2e-23 82.8 0.0 3.3e-23 82.2 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF107411 - 3.3e-15 56.3 0.0 4.8e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.10 ORF107411 - 2e-06 27.4 0.1 3.2e-06 26.7 0.1 1.3 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) TipE PF16972.5 ORF106591 - 1.1 8.4 6.8 1.4 8.0 6.8 1.2 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE Proteasom_PSMB PF10508.9 ORF105998 - 7.4e-12 44.5 0.0 8.8e-12 44.3 0.0 1.0 1 0 0 1 1 1 1 Proteasome non-ATPase 26S subunit MMS22L_C PF14911.6 ORF105998 - 0.025 13.7 0.1 0.15 11.1 0.0 1.9 1 1 1 2 2 2 0 S-phase genomic integrity recombination mediator, C-terminal DUF1087 PF06465.13 ORF105458 - 0.032 14.2 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) Lipase_3 PF01764.25 ORF103635 - 2e-18 66.6 0.0 3.1e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 ORF103635 - 0.0075 16.0 0.0 0.0094 15.7 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 ORF103635 - 0.043 13.7 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF103635 - 0.057 12.9 0.0 0.076 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 ORF103635 - 0.099 11.9 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF824 PF05688.11 ORF103635 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) Abhydrolase_1 PF00561.20 ORF103635 - 0.12 12.0 0.0 0.25 10.9 0.0 1.5 2 0 0 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF103635 - 0.13 12.8 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF1476 PF07345.11 ORF102648 - 0.078 13.4 7.3 51 4.3 0.1 5.4 1 1 6 7 7 7 0 ATPase inhibitor subunit zeta HalX PF08663.10 ORF102648 - 0.11 12.8 4.8 2.6 8.4 0.3 2.1 1 1 1 2 2 2 0 HalX domain Paramyxo_C PF01692.18 ORF102526 - 0.093 12.1 0.6 0.12 11.7 0.4 1.4 1 1 0 1 1 1 0 Paramyxovirus non-structural protein C Hint PF01079.20 ORF102320 - 2.4e-15 56.6 0.0 3e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Hint module Intein_splicing PF14890.6 ORF102320 - 0.1 12.5 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Intein splicing domain AnfO_nitrog PF09582.10 ORF102078 - 0.089 12.1 1.7 0.26 10.6 0.1 2.0 1 1 1 2 2 2 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) Smr PF01713.21 ORF100569 - 1.9e-16 60.2 0.0 3.2e-16 59.5 0.0 1.4 1 0 0 1 1 1 1 Smr domain F-box-like PF12937.7 NODE_35539_length_607_cov_2.888112_g28492_i0forward_frame_1 - 0.053 13.4 2.6 0.67 9.9 0.4 2.6 2 0 0 2 2 2 0 F-box-like TMEM189_B_dmain PF10520.9 NODE_35536_length_607_cov_3.274476_g28489_i0forward_frame_1 - 0.033 14.3 0.2 0.09 12.9 0.0 1.8 1 1 1 2 2 2 0 B domain of TMEM189, localisation domain MatE PF01554.18 NODE_35534_length_607_cov_3.744755_g28487_i0forward_frame_1 - 1.6e-25 89.7 11.4 1.6e-25 89.7 11.4 1.9 2 0 0 2 2 2 1 MatE DUF5325 PF17259.2 NODE_35534_length_607_cov_3.744755_g28487_i0forward_frame_1 - 0.013 15.3 1.7 0.013 15.3 1.7 2.6 3 0 0 3 3 3 0 Family of unknown function (DUF5325) DUF2304 PF10066.9 NODE_35534_length_607_cov_3.744755_g28487_i0forward_frame_1 - 0.75 10.0 8.3 3.5 7.9 1.8 2.8 2 2 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) DHHC PF01529.20 NODE_35534_length_607_cov_3.744755_g28487_i0forward_frame_1 - 1.4 9.1 7.9 0.21 11.7 1.1 2.2 2 1 0 2 2 2 0 DHHC palmitoyltransferase Saf_2TM PF18303.1 NODE_35534_length_607_cov_3.744755_g28487_i0forward_frame_1 - 2.1 7.9 7.3 3.6 7.2 0.1 2.6 2 1 1 3 3 3 0 SAVED-fused 2TM effector domain DUF3493 PF11998.8 NODE_35534_length_607_cov_3.744755_g28487_i0forward_frame_1 - 2.2 8.5 6.5 4 7.7 0.2 3.0 2 1 1 3 3 3 0 Low psii accumulation1 / Rep27 DUF2207 PF09972.9 NODE_35534_length_607_cov_3.744755_g28487_i0forward_frame_1 - 5.2 5.7 10.6 4 6.1 2.3 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Fucosidase_C PF16757.5 NODE_35478_length_608_cov_3.692845_g28440_i0reverse_frame_1 - 0.046 14.3 0.3 0.1 13.2 0.3 1.6 1 0 0 1 1 1 0 Alpha-L-fucosidase C-terminal domain DUF2678 PF10856.8 NODE_35477_length_608_cov_3.876091_g28439_i0forward_frame_1 - 1.5 8.7 10.0 0.097 12.6 1.9 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF2678) DUF2606 PF10794.9 NODE_35474_length_608_cov_4.567190_g28436_i0reverse_frame_1 - 0.049 13.4 0.3 0.088 12.6 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) OppC_N PF12911.7 NODE_35456_length_608_cov_129.759162_g28420_i0reverse_frame_1 - 0.17 11.9 1.4 0.41 10.6 1.4 1.7 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C DUF1639 PF07797.14 NODE_35441_length_608_cov_445.082024_g28405_i0reverse_frame_1 - 0.17 11.9 1.3 15 5.6 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1639) Goodbye PF17109.5 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_1 - 0.3 11.6 2.9 0.56 10.7 2.9 1.4 1 0 0 1 1 1 0 fungal STAND N-terminal Goodbye domain RCC1_2 PF13540.6 NODE_35410_length_609_cov_117.310105_g28377_i0reverse_frame_1 - 1.8e-11 43.5 5.2 0.034 14.0 0.0 4.4 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_35410_length_609_cov_117.310105_g28377_i0reverse_frame_1 - 0.015 15.4 0.2 0.79 9.8 0.0 2.8 2 1 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 SPX PF03105.19 NODE_35390_length_609_cov_394.376307_g28359_i0reverse_frame_1 - 0.33 10.8 3.3 0.38 10.6 3.3 1.0 1 0 0 1 1 1 0 SPX domain TPR_2 PF07719.17 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 2.5e-12 45.9 0.2 0.00071 19.5 0.0 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 9.6e-11 42.0 3.7 8.8e-08 32.5 0.8 3.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 9.3e-10 38.7 0.1 4.8e-05 23.6 0.1 3.4 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 6e-09 35.4 0.6 0.091 13.0 0.0 3.9 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 4.9e-08 32.5 3.6 0.062 13.1 0.0 3.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 2.5e-07 30.9 2.2 0.054 14.3 0.0 4.4 3 1 2 5 5 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 5.1e-07 29.3 0.3 0.0032 17.1 0.6 2.6 2 0 0 2 2 2 2 TPR repeat TPR_7 PF13176.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 6.9e-07 28.9 0.1 0.2 11.8 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 3.4e-05 24.4 0.0 0.0066 17.1 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 9.1e-05 22.6 0.1 0.00031 20.9 0.1 2.0 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.00031 21.2 0.4 2.2 9.1 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.00082 19.2 0.8 20 5.2 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat Sel1 PF08238.12 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.0044 17.6 0.2 4.3 8.2 0.0 3.3 4 0 0 4 4 4 1 Sel1 repeat TPR_9 PF13371.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.0057 16.8 0.0 0.33 11.1 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.022 14.8 0.1 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_17 PF13431.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.088 13.2 0.4 9.2 6.9 0.3 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_20 PF14561.6 NODE_35373_length_610_cov_1.909565_g28347_i0forward_frame_3 - 0.18 12.2 1.8 0.56 10.6 0.3 2.5 2 1 2 4 4 4 0 Tetratricopeptide repeat NAR PF16251.5 NODE_35364_length_610_cov_13.269565_g28338_i0reverse_frame_2 - 0.12 13.0 0.1 0.24 12.1 0.1 1.4 1 0 0 1 1 1 0 Nucleic acid-binding domain (NAR) Iron_permease PF04120.12 NODE_35364_length_610_cov_13.269565_g28338_i0reverse_frame_2 - 0.84 9.4 5.2 0.2 11.4 1.4 1.8 2 0 0 2 2 2 0 Low affinity iron permease Cu-oxidase_4 PF02578.15 NODE_35323_length_611_cov_2.196181_g28302_i0reverse_frame_2 - 0.22 11.1 0.0 0.27 10.8 0.0 1.1 1 0 0 1 1 1 0 Multi-copper polyphenol oxidoreductase laccase Glyco_transf_20 PF00982.21 NODE_35321_length_611_cov_3.123264_g28300_i0reverse_frame_3 - 0.081 11.6 0.2 0.086 11.5 0.2 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 20 BRI3BP PF14965.6 NODE_35321_length_611_cov_3.123264_g28300_i0forward_frame_3 - 0.0076 15.8 0.1 0.011 15.3 0.1 1.2 1 0 0 1 1 1 1 Negative regulator of p53/TP53 Holin_9 PF16936.5 NODE_35321_length_611_cov_3.123264_g28300_i0forward_frame_3 - 1.1 9.5 6.2 12 6.2 1.4 2.3 2 0 0 2 2 2 0 Putative holin DiS_P_DiS PF06750.13 NODE_35320_length_611_cov_3.185764_g28299_i0reverse_frame_2 - 0.056 13.6 1.7 1.8 8.7 0.2 2.5 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain DUF2892 PF11127.8 NODE_35320_length_611_cov_3.185764_g28299_i0forward_frame_3 - 0.038 14.0 3.5 0.67 10.0 0.3 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) Herpes_UL73 PF03554.13 NODE_35320_length_611_cov_3.185764_g28299_i0forward_frame_3 - 0.05 13.6 1.2 0.14 12.2 1.2 1.6 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein Herpes_US9 PF06072.11 NODE_35320_length_611_cov_3.185764_g28299_i0forward_frame_3 - 0.1 12.5 0.4 0.1 12.5 0.4 2.3 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 DUF4094 PF13334.6 NODE_35318_length_611_cov_3.590278_g28297_i0forward_frame_2 - 0.029 14.8 2.0 0.066 13.6 2.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) CbiG_C PF01890.16 NODE_35301_length_611_cov_95.885417_g28280_i0reverse_frame_2 - 0.022 15.3 0.0 0.038 14.5 0.0 1.4 1 1 0 1 1 1 0 Cobalamin synthesis G C-terminus RCC1_2 PF13540.6 NODE_35301_length_611_cov_95.885417_g28280_i0forward_frame_3 - 0.00035 20.3 9.6 1 9.2 0.1 3.8 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_35301_length_611_cov_95.885417_g28280_i0forward_frame_3 - 0.0027 17.8 0.3 5.6 7.0 0.0 3.1 3 0 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 DUF3502 PF12010.8 NODE_35301_length_611_cov_95.885417_g28280_i0forward_frame_3 - 0.1 13.3 0.5 18 6.0 0.0 2.8 1 1 2 3 3 3 0 Domain of unknown function (DUF3502) Loricrin PF15847.5 NODE_35301_length_611_cov_95.885417_g28280_i0forward_frame_3 - 0.41 9.7 9.1 0.62 9.1 9.1 1.3 1 1 0 1 1 1 0 Major keratinocyte cell envelope protein HPP PF04982.13 NODE_35292_length_611_cov_186.788194_g28272_i0reverse_frame_2 - 0.17 12.1 2.3 0.69 10.1 1.2 2.3 1 1 1 2 2 2 0 HPP family GGDEF_2 PF17853.1 NODE_35292_length_611_cov_186.788194_g28272_i0forward_frame_3 - 0.12 12.7 0.7 0.85 9.9 0.7 2.0 1 1 0 1 1 1 0 GGDEF-like domain RCC1_2 PF13540.6 NODE_35292_length_611_cov_186.788194_g28272_i0forward_frame_2 - 4.9e-30 102.7 45.0 1.8e-11 43.5 3.2 5.8 5 1 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_35292_length_611_cov_186.788194_g28272_i0forward_frame_2 - 0.11 13.1 35.9 0.79 10.4 3.3 7.0 5 3 0 5 5 5 0 Regulator of chromosome condensation (RCC1) repeat RTBV_P12 PF06361.11 NODE_35292_length_611_cov_186.788194_g28272_i0forward_frame_2 - 0.17 12.3 0.0 34 4.9 0.0 3.2 1 1 2 3 3 3 0 Rice tungro bacilliform virus P12 protein DNA_pol3_a_NI PF14480.6 NODE_35272_length_612_cov_2.188908_g28257_i0forward_frame_2 - 0.0047 16.9 2.4 0.0069 16.4 0.3 2.4 2 2 0 2 2 2 1 DNA polymerase III polC-type N-terminus I Exonuc_VII_L PF02601.15 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.0088 15.6 5.3 0.011 15.4 5.3 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit DUF5446 PF17522.2 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.021 15.0 5.6 0.051 13.8 0.4 2.7 3 0 0 3 3 3 0 Family of unknown function (DUF5446) Vps51 PF08700.11 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.023 14.8 1.8 0.023 14.8 1.8 2.8 3 0 0 3 3 3 0 Vps51/Vps67 DUF3347 PF11827.8 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.026 14.7 10.2 0.025 14.7 6.2 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) SlyX PF04102.12 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.062 13.9 4.5 4.5 7.9 0.2 3.0 3 1 0 3 3 2 0 SlyX Spectrin PF00435.21 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.18 12.3 5.4 2.9 8.4 0.1 3.1 3 0 0 3 3 3 0 Spectrin repeat Cob_adeno_trans PF01923.18 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.21 11.7 2.2 0.39 10.8 0.5 2.0 1 1 1 2 2 2 0 Cobalamin adenosyltransferase Cnl2_NKP2 PF09447.10 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.25 11.5 2.5 3.6 7.8 0.9 2.6 2 0 0 2 2 2 0 Cnl2/NKP2 family protein Prefoldin PF02996.17 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.33 10.9 10.2 5.7 6.9 0.1 3.8 2 1 2 4 4 4 0 Prefoldin subunit Tup_N PF08581.10 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.54 10.6 8.6 1.2 9.5 1.1 3.4 3 0 0 3 3 3 0 Tup N-terminal TMPIT PF07851.13 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 0.59 9.3 7.3 0.95 8.6 1.3 2.1 1 1 0 2 2 2 0 TMPIT-like protein CC2-LZ PF16516.5 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 1 9.8 10.6 1.3 9.4 0.2 3.5 2 1 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF4407 PF14362.6 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 1.4 8.2 9.9 1 8.6 4.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) TolA_bind_tri PF16331.5 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 2.2 8.4 6.4 3.5 7.8 0.7 2.8 3 1 0 3 3 2 0 TolA binding protein trimerisation CCDC84 PF14968.6 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 2.5 7.6 8.2 3.5 7.1 7.1 1.5 1 1 1 2 2 2 0 Coiled coil protein 84 DUF2203 PF09969.9 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 2.9 8.6 8.5 31 5.3 0.2 3.1 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) DUF1664 PF07889.12 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 3.4 7.7 13.3 4.3 7.4 3.2 3.1 2 1 0 3 3 3 0 Protein of unknown function (DUF1664) Csm1_N PF18504.1 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 3.9 7.9 14.5 5.1 7.5 0.5 3.4 3 1 0 3 3 3 0 Csm1 N-terminal domain GLE1 PF07817.13 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 5.3 6.2 10.2 0.36 10.0 0.1 2.4 1 1 2 3 3 3 0 GLE1-like protein V_ATPase_I PF01496.19 NODE_35271_length_612_cov_2.688042_g28256_i0forward_frame_2 - 5.6 4.8 10.6 12 3.7 10.6 1.5 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family DHC_N1 PF08385.12 NODE_35254_length_612_cov_98.376083_g28240_i0forward_frame_3 - 0.0045 15.7 2.1 0.0051 15.5 2.1 1.1 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 1 zf-B_box PF00643.24 NODE_35254_length_612_cov_98.376083_g28240_i0forward_frame_3 - 1.2 9.4 10.3 2.3 8.4 10.3 1.4 1 0 0 1 1 1 0 B-box zinc finger DUF2457 PF10446.9 NODE_35252_length_612_cov_103.561525_g28238_i0forward_frame_3 - 4.1 6.4 13.4 4.9 6.2 13.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Prok-RING_4 PF14447.6 NODE_35252_length_612_cov_103.561525_g28238_i0forward_frame_2 - 0.37 10.7 5.2 1.2 9.0 0.6 2.5 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 ERGIC_N PF13850.6 NODE_35251_length_612_cov_106.712305_g28237_i0reverse_frame_2 - 0.0076 16.6 0.6 0.016 15.6 0.6 1.7 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Baculo_11_kDa PF06143.11 NODE_35251_length_612_cov_106.712305_g28237_i0reverse_frame_2 - 0.0084 15.7 0.2 0.015 14.9 0.2 1.4 1 0 0 1 1 1 1 Baculovirus 11 kDa family MIG-14_Wnt-bd PF06664.12 NODE_35251_length_612_cov_106.712305_g28237_i0reverse_frame_2 - 0.017 14.4 0.4 0.024 13.9 0.4 1.2 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion Cytomega_TRL10 PF06084.11 NODE_35251_length_612_cov_106.712305_g28237_i0reverse_frame_2 - 0.021 14.8 0.1 0.03 14.3 0.1 1.3 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein 7TM_GPCR_Srh PF10318.9 NODE_35251_length_612_cov_106.712305_g28237_i0reverse_frame_2 - 0.037 13.0 1.0 0.054 12.5 1.0 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh Oxidored_q6 PF01058.22 NODE_35244_length_612_cov_169.894281_g25576_i1forward_frame_3 - 0.12 12.2 0.1 0.21 11.4 0.1 1.9 1 1 0 1 1 1 0 NADH ubiquinone oxidoreductase, 20 Kd subunit Hanta_G2 PF01561.16 NODE_35244_length_612_cov_169.894281_g25576_i1forward_frame_2 - 0.042 12.5 0.4 0.057 12.0 0.4 1.1 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 IMUP PF15761.5 NODE_35242_length_612_cov_213.783362_g26004_i1reverse_frame_3 - 0.0029 18.3 3.5 0.0029 18.3 3.5 3.3 2 1 1 3 3 3 1 Immortalisation up-regulated protein CCSAP PF15748.5 NODE_35242_length_612_cov_213.783362_g26004_i1reverse_frame_3 - 7.8 6.6 28.0 11 6.1 28.0 1.3 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated DUF1180 PF06679.12 ORF99480 - 0.83 10.1 4.2 9.5 6.6 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1180) AWPM-19 PF05512.11 ORF98733 - 0.014 15.6 0.1 0.027 14.6 0.1 1.4 1 0 0 1 1 1 0 AWPM-19-like family UDPGT PF00201.18 ORF98600 - 1e-13 50.9 0.0 1.2e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF98600 - 6.6e-06 26.2 0.0 7.6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF98600 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 UDPGT PF00201.18 ORF98142 - 1e-13 50.9 0.0 1.2e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF98142 - 6.6e-06 26.2 0.0 7.6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF98142 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 Homeodomain PF00046.29 ORF96607 - 0.0092 15.8 5.8 0.016 15.0 5.8 1.5 1 0 0 1 1 1 1 Homeodomain Paramyxo_ncap PF00973.19 ORF96607 - 0.072 12.0 1.1 0.092 11.6 1.1 1.3 1 1 0 1 1 1 0 Paramyxovirus nucleocapsid protein DNA_methylase PF00145.17 ORF96126 - 0.0047 16.3 0.0 0.1 11.9 0.0 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase DUF2398 PF09661.10 ORF95425 - 0.24 10.6 0.0 0.28 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2398) adh_short PF00106.25 ORF93814 - 5e-15 55.5 0.0 6.3e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF93814 - 1.1e-10 41.5 0.0 1.3e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1490 PF07371.12 ORF93415 - 0.00083 19.4 5.1 0.018 15.1 0.2 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1490) Prefoldin_2 PF01920.20 ORF93415 - 0.042 13.8 2.0 0.71 9.9 0.0 2.9 3 1 0 3 3 3 0 Prefoldin subunit VRR_NUC PF08774.11 ORF93415 - 0.043 13.9 0.0 0.067 13.3 0.0 1.4 1 0 0 1 1 1 0 VRR-NUC domain UPF0242 PF06785.11 ORF93415 - 0.051 13.7 2.6 0.086 12.9 2.6 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4164 PF13747.6 ORF93415 - 0.17 12.2 5.3 0.07 13.4 2.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) DUF4635 PF15466.6 ORF93415 - 0.54 9.8 4.9 1.3 8.5 0.5 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4635) Apolipoprotein PF01442.18 ORF93415 - 0.65 9.8 12.2 0.76 9.6 10.5 1.9 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain GFD1 PF17331.2 ORF93415 - 1.7 8.9 5.4 3.9 7.8 3.9 2.4 2 1 0 2 2 2 0 GFD1 mRNA transport factor Herpes_LMP2 PF07415.11 ORF93205 - 0.01 14.6 0.1 0.015 14.2 0.1 1.2 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein MFS_1 PF07690.16 ORF91968 - 0.0026 16.7 11.3 0.0042 16.1 11.3 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily Mt_ATP-synt_B PF05405.14 ORF91171 - 0.11 12.1 6.0 0.044 13.4 3.2 1.7 2 0 0 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Sec1 PF00995.23 ORF89901 - 1.1e-11 44.7 0.3 1.3e-11 44.5 0.3 1.1 1 0 0 1 1 1 1 Sec1 family ECSIT_C PF14784.6 ORF89901 - 0.00031 21.1 0.2 0.00066 20.0 0.1 1.6 1 1 0 1 1 1 1 C-terminal domain of the ECSIT protein DUF5387 PF17361.2 ORF89901 - 0.0011 18.7 0.6 0.0016 18.2 0.6 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5387) Arc_PepC PF06819.11 ORF89901 - 0.04 14.0 0.5 0.093 12.9 0.5 1.6 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminal Domain Staufen_C PF16482.5 ORF89901 - 0.056 13.6 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Staufen C-terminal domain DUF2325 PF10087.9 ORF89901 - 0.098 12.8 0.1 0.28 11.3 0.1 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) Phostensin PF13914.6 ORF87254 - 0.066 13.9 2.1 0.23 12.1 2.0 1.8 1 1 0 1 1 1 0 Phostensin PP1-binding and SH3-binding region UPF0147 PF03685.13 ORF87106 - 0.18 11.9 3.2 0.91 9.6 0.1 2.7 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0147) BSD PF03909.17 ORF85484 - 0.071 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 BSD domain HH_signal PF01085.18 ORF8519 - 0.19 11.4 0.1 0.29 10.8 0.1 1.3 1 0 0 1 1 1 0 Hedgehog amino-terminal signalling domain LEDGF PF11467.8 ORF84123 - 0.16 11.6 0.5 0.55 9.9 0.2 1.9 1 1 1 2 2 2 0 Lens epithelium-derived growth factor (LEDGF) MAPEG PF01124.18 ORF81429 - 4.4e-07 29.8 0.1 6.5e-07 29.3 0.1 1.4 1 1 0 1 1 1 1 MAPEG family UcrQ PF02939.16 ORF71290 - 1.7 8.6 5.2 0.46 10.5 0.6 2.4 2 1 1 3 3 3 0 UcrQ family XPC-binding PF09280.11 ORF71290 - 4.5 7.1 17.7 5.5 6.8 7.1 3.6 3 1 1 4 4 4 0 XPC-binding domain LRR_1 PF00560.33 ORF71176 - 0.16 12.6 0.6 0.16 12.6 0.6 3.2 4 0 0 4 4 4 0 Leucine Rich Repeat LRR_6 PF13516.6 ORF71176 - 0.45 10.7 3.6 0.52 10.5 0.3 2.7 2 0 0 2 2 2 0 Leucine Rich repeat LRR_8 PF13855.6 ORF71176 - 0.92 9.3 6.5 0.2 11.4 1.6 2.4 2 1 0 2 2 2 0 Leucine rich repeat B2-adapt-app_C PF09066.10 ORF71059 - 2.1e-17 63.2 0.3 3.8e-17 62.4 0.3 1.5 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain AAA_26 PF13500.6 ORF67199 - 1.8e-10 41.0 0.0 2.5e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PKcGMP_CC PF16808.5 ORF66488 - 0.34 10.8 5.7 2.3 8.2 2.0 2.2 1 1 1 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Aldo_ket_red PF00248.21 ORF64965 - 1.1e-14 54.3 0.0 2.7e-14 53.1 0.0 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family DHHC PF01529.20 ORF63736 - 3e-06 27.4 16.4 7.4e-06 26.1 16.4 1.7 1 0 0 1 1 1 1 DHHC palmitoyltransferase PLATZ PF04640.14 ORF63317 - 0.028 15.0 0.2 0.028 15.0 0.2 1.8 2 0 0 2 2 2 0 PLATZ transcription factor zinc_ribbon_13 PF09855.9 ORF63317 - 0.098 12.8 0.9 3.8 7.8 0.1 2.4 2 0 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) APP_Cu_bd PF12924.7 ORF6330 - 0.085 13.6 4.2 0.21 12.3 4.2 1.7 1 0 0 1 1 1 0 Copper-binding of amyloid precursor, CuBD adh_short PF00106.25 ORF59945 - 8e-17 61.3 0.0 1e-16 61.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF59945 - 9.9e-11 41.6 0.0 1.2e-10 41.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks114.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks114.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks114.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks114.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:00:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HSCB_C PF07743.13 ORF56319 - 6.4e-18 65.0 12.0 1.5e-17 63.8 9.0 2.2 2 0 0 2 2 2 1 HSCB C-terminal oligomerisation domain DnaJ PF00226.31 ORF56319 - 1.9e-05 24.7 0.0 3.5e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 DnaJ domain DUF480 PF04337.12 ORF56319 - 0.02 15.0 0.0 0.032 14.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function, DUF480 SMC_N PF02463.19 ORF56319 - 0.26 10.7 0.4 0.39 10.1 0.4 1.3 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain GerE PF00196.19 ORF54664 - 1.1e-21 76.1 1.3 1.7e-21 75.5 1.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 ORF54664 - 9e-09 34.9 0.2 1.7e-08 34.0 0.2 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 ORF54664 - 1.9e-06 27.3 0.4 4.2e-06 26.2 0.4 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 ORF54664 - 1.7e-05 24.4 0.6 4.8e-05 23.0 0.2 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF54664 - 0.00011 21.9 0.0 0.0005 19.8 0.0 2.0 1 1 1 2 2 2 1 Homeodomain-like domain HTH_24 PF13412.6 ORF54664 - 0.0002 20.8 0.2 0.00037 20.0 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 ORF54664 - 0.0016 18.2 0.2 0.019 14.8 0.2 2.2 1 1 0 1 1 1 1 LexA DNA binding domain HTH_11 PF08279.12 ORF54664 - 0.0017 18.2 0.8 0.017 15.0 0.2 2.3 2 0 0 2 2 2 1 HTH domain DUF2089 PF09862.9 ORF54664 - 0.0046 17.0 0.0 0.0081 16.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2089) HTH_28 PF13518.6 ORF54664 - 0.012 15.7 0.0 0.03 14.4 0.0 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_7 PF02796.15 ORF54664 - 0.016 15.2 0.0 0.032 14.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_5 PF01022.20 ORF54664 - 0.018 14.9 0.0 0.029 14.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Sigma70_ECF PF07638.11 ORF54664 - 0.032 14.1 0.1 0.057 13.3 0.1 1.5 1 1 0 1 1 1 0 ECF sigma factor HTH_20 PF12840.7 ORF54664 - 0.041 13.9 0.2 0.071 13.2 0.2 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 ORF54664 - 0.079 12.8 0.0 0.21 11.4 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain NUMOD1 PF07453.13 ORF54664 - 0.17 12.1 0.1 1.5 9.2 0.0 2.2 2 0 0 2 2 2 0 NUMOD1 domain zf-C3HC4_4 PF15227.6 ORF52563 - 5.5e-07 29.6 10.0 1.4e-06 28.4 10.0 1.7 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Spc7 PF08317.11 ORF52563 - 0.00018 20.5 12.0 0.00027 19.9 12.0 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein COG2 PF06148.11 ORF52563 - 0.0002 21.5 3.8 0.18 11.9 0.8 2.3 1 1 1 2 2 2 2 COG (conserved oligomeric Golgi) complex component, COG2 zf-RING_UBOX PF13445.6 ORF52563 - 0.00079 19.4 3.9 0.00079 19.4 3.9 2.5 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF52563 - 0.00094 19.0 3.5 0.00094 19.0 3.5 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Tropomyosin_1 PF12718.7 ORF52563 - 0.0011 19.2 3.6 0.0011 19.2 3.6 2.6 2 1 1 3 3 2 1 Tropomyosin like DHR10 PF18595.1 ORF52563 - 0.0015 18.5 0.3 0.0015 18.5 0.3 2.4 1 1 1 2 2 2 1 Designed helical repeat protein 10 domain FlaC_arch PF05377.11 ORF52563 - 0.0017 18.7 11.6 0.028 14.8 3.8 3.5 1 1 2 3 3 3 1 Flagella accessory protein C (FlaC) CENP-F_leu_zip PF10473.9 ORF52563 - 0.0023 18.0 15.6 0.0065 16.5 15.6 1.8 1 1 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Laminin_I PF06008.14 ORF52563 - 0.0055 16.4 10.4 0.0081 15.9 10.4 1.2 1 0 0 1 1 1 1 Laminin Domain I zf-C3HC4 PF00097.25 ORF52563 - 0.0058 16.5 7.4 0.0058 16.5 7.4 2.2 2 1 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) DUF3584 PF12128.8 ORF52563 - 0.0075 13.9 7.5 0.009 13.6 7.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) NPV_P10 PF05531.12 ORF52563 - 0.0077 16.7 5.4 0.78 10.3 5.4 2.4 1 1 0 1 1 1 1 Nucleopolyhedrovirus P10 protein DUF4200 PF13863.6 ORF52563 - 0.01 16.2 18.0 0.01 16.2 18.0 1.7 2 0 0 2 2 1 0 Domain of unknown function (DUF4200) Dynamin_M PF01031.20 ORF52563 - 0.012 14.8 6.6 0.022 14.0 6.6 1.4 1 0 0 1 1 1 0 Dynamin central region DUF1664 PF07889.12 ORF52563 - 0.017 15.2 7.2 0.8 9.8 0.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 ORF52563 - 0.018 15.1 7.0 0.055 13.5 7.0 1.9 1 1 0 1 1 1 0 Laminin Domain II TPR_MLP1_2 PF07926.12 ORF52563 - 0.02 15.0 4.0 0.02 15.0 4.0 2.9 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Dor1 PF04124.12 ORF52563 - 0.023 13.4 5.3 0.033 12.9 5.3 1.2 1 0 0 1 1 1 0 Dor1-like family zf-C3HC4_3 PF13920.6 ORF52563 - 0.023 14.5 3.8 0.023 14.5 3.8 2.5 2 1 1 3 3 2 0 Zinc finger, C3HC4 type (RING finger) Phage_GP20 PF06810.11 ORF52563 - 0.027 14.3 15.9 0.19 11.5 9.8 2.4 1 1 1 2 2 2 0 Phage minor structural protein GP20 MAD PF05557.13 ORF52563 - 0.029 12.8 11.6 0.037 12.4 11.6 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein zf-RING_10 PF16685.5 ORF52563 - 0.033 14.3 8.9 0.086 13.0 8.9 1.8 1 0 0 1 1 1 0 zinc RING finger of MSL2 CEP63 PF17045.5 ORF52563 - 0.036 14.0 9.8 0.059 13.3 9.8 1.3 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa WXG100 PF06013.12 ORF52563 - 0.037 14.2 1.2 12 6.2 0.2 2.9 2 1 1 3 3 3 0 Proteins of 100 residues with WXG TolA_bind_tri PF16331.5 ORF52563 - 0.04 14.0 1.1 3.8 7.7 0.0 2.4 2 0 0 2 2 2 0 TolA binding protein trimerisation DUF724 PF05266.14 ORF52563 - 0.045 13.6 10.5 0.035 13.9 8.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF724) EzrA PF06160.12 ORF52563 - 0.046 11.9 12.2 0.073 11.2 12.2 1.3 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA ATG16 PF08614.11 ORF52563 - 0.049 13.8 6.6 0.086 13.1 6.6 1.4 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Baculo_PEP_C PF04513.12 ORF52563 - 0.052 13.6 1.9 0.097 12.7 1.9 1.5 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus CdvA PF18822.1 ORF52563 - 0.053 13.3 14.0 0.37 10.6 14.1 2.1 1 1 0 1 1 1 0 CdvA-like coiled-coil domain BRCA-2_OB3 PF09104.10 ORF52563 - 0.061 13.0 2.2 0.16 11.6 0.6 2.2 1 1 1 2 2 2 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 Exonuc_VII_L PF02601.15 ORF52563 - 0.064 12.8 3.5 0.079 12.5 3.5 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF948 PF06103.11 ORF52563 - 0.067 13.5 3.0 0.99 9.7 0.5 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Apolipoprotein PF01442.18 ORF52563 - 0.072 13.0 5.0 0.16 11.8 5.0 1.6 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain TMPIT PF07851.13 ORF52563 - 0.078 12.2 11.9 0.39 9.9 0.6 2.2 1 1 1 2 2 2 0 TMPIT-like protein DUF4407 PF14362.6 ORF52563 - 0.087 12.2 2.4 0.11 11.8 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Prok-RING_4 PF14447.6 ORF52563 - 0.1 12.5 7.7 0.51 10.3 7.7 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 DUF4404 PF14357.6 ORF52563 - 0.12 13.1 3.2 0.24 12.1 2.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) IF-2B PF01008.17 ORF52563 - 0.12 11.6 3.0 0.21 10.7 2.7 1.6 1 1 0 1 1 1 0 Initiation factor 2 subunit family TRPM_tetra PF16519.5 ORF52563 - 0.15 12.2 8.5 0.47 10.6 0.9 3.0 1 1 2 3 3 3 0 Tetramerisation domain of TRPM SKA2 PF16740.5 ORF52563 - 0.15 11.9 8.0 0.35 10.7 3.7 2.5 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 DUF2408 PF10303.9 ORF52563 - 0.15 12.6 7.5 0.34 11.5 7.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) TPD52 PF04201.15 ORF52563 - 0.17 11.5 7.5 0.15 11.6 6.5 1.5 1 1 0 1 1 1 0 Tumour protein D52 family DUF2935 PF11155.8 ORF52563 - 0.18 12.1 3.8 0.41 11.0 3.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) APG17 PF04108.12 ORF52563 - 0.21 10.6 8.6 0.72 8.9 8.6 1.8 1 1 0 1 1 1 0 Autophagy protein Apg17 TACC_C PF05010.14 ORF52563 - 0.23 11.2 20.2 0.076 12.8 5.4 2.7 2 1 1 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Synaptobrevin PF00957.21 ORF52563 - 0.4 10.5 5.3 12 5.8 0.2 3.0 1 1 1 2 2 2 0 Synaptobrevin CENP-H PF05837.12 ORF52563 - 0.41 11.1 13.4 0.3 11.5 7.4 2.9 2 1 1 3 3 3 0 Centromere protein H (CENP-H) zf-RING_5 PF14634.6 ORF52563 - 0.43 10.6 15.4 0.13 12.2 9.5 2.5 1 1 1 2 2 2 0 zinc-RING finger domain UPF0242 PF06785.11 ORF52563 - 0.46 10.5 13.6 0.46 10.6 11.5 2.0 2 1 0 2 2 1 0 Uncharacterised protein family (UPF0242) N-terminus Fzo_mitofusin PF04799.13 ORF52563 - 0.47 10.0 5.8 0.51 9.9 4.5 1.7 1 1 0 1 1 1 0 fzo-like conserved region DUF883 PF05957.13 ORF52563 - 0.72 10.5 2.1 1.3 9.7 1.1 2.0 1 1 1 2 2 1 0 Bacterial protein of unknown function (DUF883) 60KD_IMP PF02096.20 ORF52563 - 0.78 9.6 7.0 0.39 10.6 1.5 2.2 1 1 1 2 2 2 0 60Kd inner membrane protein DUF1943 PF09172.11 ORF52563 - 0.81 8.9 7.2 0.97 8.6 7.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) DMPK_coil PF08826.10 ORF52563 - 0.88 9.7 13.4 5 7.3 3.5 3.5 2 1 1 3 3 3 0 DMPK coiled coil domain like MRPL52 PF18699.1 ORF52563 - 0.92 9.7 8.3 0.19 11.9 3.6 2.1 2 0 0 2 2 2 0 Mitoribosomal protein mL52 DUF16 PF01519.16 ORF52563 - 0.99 9.9 10.1 2.7 8.5 10.1 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 DUF1640 PF07798.11 ORF52563 - 1 9.4 12.5 7.9 6.5 12.2 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) OmpH PF03938.14 ORF52563 - 1 9.7 12.6 6.9 7.0 12.6 2.2 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) GrpE PF01025.19 ORF52563 - 1.1 8.9 16.6 0.49 10.0 4.1 2.5 2 1 1 3 3 2 0 GrpE Lectin_N PF03954.14 ORF52563 - 1.3 8.7 9.1 2.5 7.9 1.9 2.5 2 1 1 3 3 2 0 Hepatic lectin, N-terminal domain CREPT PF16566.5 ORF52563 - 2.3 8.4 10.9 8.6 6.5 4.9 2.4 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Leu_zip PF15294.6 ORF52563 - 2.4 7.6 20.1 0.17 11.4 14.5 1.7 2 0 0 2 2 2 0 Leucine zipper zf-RING_2 PF13639.6 ORF52563 - 2.6 8.5 14.1 0.96 9.8 9.0 2.5 1 1 1 2 2 2 0 Ring finger domain Snapin_Pallidin PF14712.6 ORF52563 - 2.7 8.5 9.8 5.9 7.4 0.1 2.4 1 1 1 2 2 2 0 Snapin/Pallidin KxDL PF10241.9 ORF52563 - 5.4 7.4 16.1 0.33 11.2 5.6 2.7 2 1 1 3 3 2 0 Uncharacterized conserved protein DUF148 PF02520.17 ORF52563 - 6.6 6.9 11.9 6.2 7.0 5.5 2.3 1 1 1 2 2 2 0 Domain of unknown function DUF148 TPP1 PF10341.9 ORF52488 - 0.048 13.6 0.1 0.078 13.0 0.1 1.4 1 0 0 1 1 1 0 Shelterin complex subunit, TPP1/ACD RRM_2 PF04059.12 ORF45739 - 1.3e-20 73.4 0.0 1.7e-20 73.0 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF45739 - 0.0006 19.6 0.0 0.00098 18.9 0.0 1.5 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF1428 PF07237.11 ORF44189 - 1.4e-46 156.9 1.8 1.8e-46 156.6 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1428) NIPSNAP PF07978.13 ORF44189 - 0.047 13.9 0.1 0.083 13.1 0.1 1.3 1 0 0 1 1 1 0 NIPSNAP PheRS_DBD2 PF18554.1 ORF44127 - 0.085 12.9 2.6 0.24 11.4 2.6 1.8 1 0 0 1 1 1 0 PheRS DNA binding domain 2 DUF1490 PF07371.12 ORF42992 - 0.00083 19.4 5.1 0.018 15.1 0.2 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1490) Prefoldin_2 PF01920.20 ORF42992 - 0.042 13.8 2.0 0.71 9.9 0.0 2.9 3 1 0 3 3 3 0 Prefoldin subunit VRR_NUC PF08774.11 ORF42992 - 0.043 13.9 0.0 0.067 13.3 0.0 1.4 1 0 0 1 1 1 0 VRR-NUC domain UPF0242 PF06785.11 ORF42992 - 0.051 13.7 2.6 0.086 12.9 2.6 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4164 PF13747.6 ORF42992 - 0.17 12.2 5.3 0.07 13.4 2.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) DUF4635 PF15466.6 ORF42992 - 0.54 9.8 4.9 1.3 8.5 0.5 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4635) Apolipoprotein PF01442.18 ORF42992 - 0.65 9.8 12.2 0.76 9.6 10.5 1.9 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain GFD1 PF17331.2 ORF42992 - 1.7 8.9 5.4 3.9 7.8 3.9 2.4 2 1 0 2 2 2 0 GFD1 mRNA transport factor Ldh_1_C PF02866.18 ORF40832 - 1.2e-40 139.2 0.0 1.4e-40 139.0 0.0 1.0 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Trehalose_PPase PF02358.16 ORF39785 - 1.8e-39 135.2 0.0 2.2e-39 135.0 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase Hydrolase_3 PF08282.12 ORF39785 - 0.19 11.4 0.0 0.23 11.2 0.0 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Neuroparsin PF07327.11 ORF35283 - 0.023 15.2 1.9 0.048 14.1 1.9 1.5 1 0 0 1 1 1 0 Neuroparsin zf-CDGSH PF09360.10 ORF33009 - 0.00087 19.5 1.3 0.0011 19.1 0.1 1.8 2 0 0 2 2 2 1 Iron-binding zinc finger CDGSH type DUF3024 PF11225.8 ORF33009 - 0.075 13.3 0.3 0.35 11.1 0.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3024) Fmp27_SW PF10305.9 ORF32964 - 0.012 16.3 1.7 0.022 15.5 1.4 1.7 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Dynein_AAA_lid PF17852.1 ORF32964 - 0.034 14.2 3.5 1 9.4 0.4 2.6 3 0 0 3 3 3 0 Dynein heavy chain AAA lid domain Swm2 PF17083.5 ORF32964 - 0.078 13.0 1.9 1.6 8.7 0.1 2.3 2 0 0 2 2 2 0 Nucleolar protein Swm2 adh_short PF00106.25 ORF3230 - 0.14 11.5 0.0 0.23 10.9 0.0 1.2 1 0 0 1 1 1 0 short chain dehydrogenase UDPGT PF00201.18 ORF31834 - 1e-13 50.9 0.0 1.2e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF31834 - 6.6e-06 26.2 0.0 7.6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF31834 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 BPD_transp_1 PF00528.22 ORF31273 - 7.8e-16 58.4 11.8 1.3e-15 57.6 11.8 1.4 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component MAGI_u5 PF16666.5 ORF30834 - 1.9 8.7 9.5 0.036 14.2 2.5 1.9 2 1 0 2 2 2 0 Unstructured region on MAGI SH3_15 PF18346.1 ORF29709 - 0.00021 21.5 2.1 0.0019 18.5 1.1 2.2 2 0 0 2 2 2 1 Mind bomb SH3 repeat domain KOW PF00467.29 ORF29709 - 0.16 12.0 3.2 0.18 11.8 0.5 2.1 2 0 0 2 2 2 0 KOW motif Hydrolase_4 PF12146.8 ORF29675 - 2.7e-09 36.7 0.0 3.4e-08 33.0 0.0 2.1 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF29675 - 3.3e-05 23.4 0.0 0.024 14.1 0.0 2.1 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF29675 - 0.00029 21.5 0.4 0.00035 21.2 0.4 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF29675 - 0.00037 20.2 0.1 0.28 10.8 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold FSH1 PF03959.13 ORF29675 - 0.01 15.5 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 ORF29675 - 0.016 15.3 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein Esterase PF00756.20 ORF29675 - 0.24 11.0 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 Putative esterase BIRC6 PF12356.8 ORF28743 - 0.082 12.3 1.4 0.14 11.6 1.4 1.3 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 DUF3437 PF11919.8 ORF27799 - 3.9e-07 29.9 0.0 1.1e-06 28.4 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF3437) HEAT PF02985.22 ORF27799 - 0.09 13.1 0.0 0.31 11.4 0.0 2.0 1 0 0 1 1 1 0 HEAT repeat IFT20 PF14931.6 ORF27799 - 0.091 12.9 1.4 0.27 11.4 0.2 2.3 2 1 1 3 3 3 0 Intraflagellar transport complex B, subunit 20 IZUMO PF15005.6 ORF27799 - 0.14 12.7 0.2 0.27 11.7 0.2 1.4 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated Big_11 PF18200.1 ORF22863 - 0.2 11.6 0.0 0.35 10.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial Ig-like domain UDPGT PF00201.18 ORF21950 - 1e-13 50.9 0.0 1.2e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF21950 - 6.6e-06 26.2 0.0 7.4e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF21950 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 TMEM132D_C PF15706.5 ORF20811 - 0.44 10.4 5.7 0.062 13.1 1.4 1.7 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF4816 PF16086.5 ORF20350 - 3.6 7.6 6.2 14 5.7 1.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4816) MAGI_u5 PF16666.5 ORF152417 - 1.9 8.7 9.5 0.036 14.2 2.5 1.9 2 1 0 2 2 2 0 Unstructured region on MAGI Borrelia_P83 PF05262.11 ORF152392 - 0.014 13.9 10.7 0.014 13.9 10.7 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF2118 PF09891.9 ORF152392 - 0.057 13.4 1.3 0.092 12.7 1.3 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) NAD_binding_1 PF00175.21 ORF152392 - 9.7 6.9 8.0 49 4.6 6.1 2.5 2 1 1 3 3 3 0 Oxidoreductase NAD-binding domain Nucleocapsid-N PF11030.8 ORF150439 - 0.08 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Nucleocapsid protein N PKcGMP_CC PF16808.5 ORF148632 - 0.34 10.8 5.7 2.3 8.2 2.0 2.2 1 1 1 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase ADAM17_MPD PF16698.5 ORF148539 - 0.7 10.3 10.8 2.9 8.3 0.4 3.0 3 0 0 3 3 3 0 Membrane-proximal domain, switch, for ADAM17 Ribosomal_S7 PF00177.21 ORF14228 - 6.6e-38 129.7 1.1 8.5e-38 129.3 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e NDUF_B7 PF05676.13 ORF140501 - 0.037 13.7 0.1 0.081 12.7 0.1 1.6 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) 12TM_1 PF09847.9 ORF139859 - 0.065 12.3 10.8 0.079 12.0 10.8 1.1 1 0 0 1 1 1 0 Membrane protein of 12 TMs Plasmod_dom_1 PF09715.10 ORF136228 - 0.16 12.1 0.4 0.87 9.7 0.1 2.4 2 0 0 2 2 2 0 Plasmodium protein of unknown function (Plasmod_dom_1) GPR15L PF15854.5 ORF134719 - 0.57 10.4 3.6 1.6 9.0 3.6 1.7 1 1 0 1 1 1 0 G-protein coupled receptor ligand 15 NB PF04159.13 ORF13072 - 0.15 12.1 0.3 0.23 11.5 0.3 1.2 1 0 0 1 1 1 0 NB glycoprotein CSD PF00313.22 ORF125674 - 1.3e-18 66.6 1.0 6.2e-09 35.6 0.1 2.5 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF125674 - 2.8e-05 23.7 0.1 0.14 11.9 0.1 2.5 2 0 0 2 2 2 2 Ribonuclease B OB domain ABC_tran PF00005.27 ORF124394 - 2.6e-18 66.9 0.0 4.9e-18 66.0 0.0 1.4 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF124394 - 0.022 14.2 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF124394 - 0.057 13.7 0.3 0.44 10.8 0.3 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit BSD PF03909.17 ORF123307 - 0.071 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 BSD domain SH3_9 PF14604.6 ORF12167 - 0.00022 21.0 1.0 0.00022 21.0 1.0 2.0 2 1 0 2 2 2 1 Variant SH3 domain SH3_1 PF00018.28 ORF12167 - 0.0068 16.0 1.3 0.016 14.8 1.3 1.7 1 1 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 ORF12167 - 0.015 15.0 0.0 0.026 14.2 0.0 1.4 1 0 0 1 1 1 0 Variant SH3 domain PhoLip_ATPase_C PF16212.5 ORF119624 - 2.2e-44 152.1 1.5 2.6e-44 151.9 1.5 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Med3 PF11593.8 ORF116179 - 5.6 6.0 6.5 7 5.7 6.5 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF973 PF06157.11 ORF115262 - 0.17 10.9 0.0 0.24 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) YhfC PF10086.9 ORF112235 - 0.00023 20.6 0.3 0.00038 19.9 0.3 1.4 1 0 0 1 1 1 1 YhfC intramembrane metalloprotease Saf_2TM PF18303.1 ORF112235 - 0.16 11.6 0.0 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain UDPGT PF00201.18 ORF112211 - 1e-13 50.9 0.0 1.2e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF112211 - 6.6e-06 26.2 0.0 7.6e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF112211 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 zf-NF-X1 PF01422.17 ORF110436 - 0.027 14.5 3.6 0.027 14.5 3.6 5.2 5 1 1 6 6 6 0 NF-X1 type zinc finger Guanylate_kin PF00625.21 ORF110000 - 1.7e-20 73.5 0.3 4.2e-20 72.2 0.0 1.8 2 0 0 2 2 2 1 Guanylate kinase RNA_pol_Rpb6 PF01192.22 ORF110000 - 3.1e-15 55.8 0.3 1.2e-14 53.9 0.1 2.0 2 0 0 2 2 2 1 RNA polymerase Rpb6 AOX PF01786.17 ORF110000 - 0.02 14.5 0.9 0.038 13.6 0.2 1.7 2 0 0 2 2 2 0 Alternative oxidase DNA_methylase PF00145.17 ORF108422 - 0.0047 16.3 0.0 0.1 11.9 0.0 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase DNA_methylase PF00145.17 ORF108351 - 0.0047 16.3 0.0 0.1 11.9 0.0 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase AAA PF00004.29 ORF104065 - 9.5e-22 77.8 0.0 1.7e-21 77.1 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF104065 - 0.0054 16.7 0.0 0.014 15.4 0.0 1.7 1 0 0 1 1 1 1 Vps4 C terminal oligomerisation domain AAA_lid_3 PF17862.1 ORF104065 - 0.0082 15.9 0.0 0.032 14.0 0.0 2.0 2 0 0 2 2 2 1 AAA+ lid domain AAA_2 PF07724.14 ORF104065 - 0.012 15.7 0.0 0.022 14.9 0.0 1.5 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) OrfB_Zn_ribbon PF07282.11 ORF104065 - 0.14 12.1 0.2 0.41 10.6 0.0 1.8 2 0 0 2 2 2 0 Putative transposase DNA-binding domain adh_short PF00106.25 ORF103531 - 2.1e-24 86.0 0.0 3.2e-24 85.5 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF103531 - 6.1e-15 55.4 0.0 7.3e-15 55.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase VPS28 PF03997.12 ORF10062 - 0.062 13.0 0.3 0.75 9.4 0.1 2.0 2 0 0 2 2 2 0 VPS28 protein TIG PF01833.24 NODE_35674_length_604_cov_92.989455_g28609_i0forward_frame_1 - 6.4e-16 58.2 5.5 6.4e-16 58.2 5.5 1.8 2 0 0 2 2 2 1 IPT/TIG domain YDG PF18657.1 NODE_35674_length_604_cov_92.989455_g28609_i0forward_frame_1 - 0.79 10.0 4.4 4.4 7.6 2.7 2.6 2 1 0 2 2 2 0 YDG domain DUF945 PF06097.11 NODE_35657_length_605_cov_2.892982_g28596_i0reverse_frame_1 - 0.1 11.7 1.5 0.14 11.3 1.5 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF945) Ornatin PF02088.15 NODE_35644_length_605_cov_89.282456_g28583_i0forward_frame_1 - 7.2 6.5 14.8 7.4 6.4 1.0 2.3 2 0 0 2 2 2 0 Ornatin RCC1_2 PF13540.6 NODE_35628_length_605_cov_177.468421_g28567_i0reverse_frame_1 - 1.2e-07 31.4 3.7 0.093 12.6 0.1 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 NODE_35628_length_605_cov_177.468421_g28567_i0reverse_frame_1 - 0.23 11.4 0.1 5.5 6.9 0.0 2.5 2 1 1 3 3 3 0 Lipocalin / cytosolic fatty-acid binding protein family RLI PF04068.15 NODE_35593_length_606_cov_5.420315_g28538_i0reverse_frame_1 - 0.0045 16.8 0.7 0.012 15.4 0.7 1.8 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Lipase_3 PF01764.25 NODE_35593_length_606_cov_5.420315_g28538_i0forward_frame_1 - 6.6e-13 48.7 0.0 1e-12 48.1 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) DUF676 PF05057.14 NODE_35593_length_606_cov_5.420315_g28538_i0forward_frame_1 - 0.025 14.1 0.0 0.035 13.6 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_35593_length_606_cov_5.420315_g28538_i0forward_frame_1 - 0.044 13.5 0.0 0.06 13.1 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein DUF2974 PF11187.8 NODE_35593_length_606_cov_5.420315_g28538_i0forward_frame_1 - 0.093 12.3 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Ras PF00071.22 NODE_35582_length_606_cov_97.760070_g28527_i0forward_frame_1 - 6.6e-17 61.6 0.0 8.5e-17 61.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_35582_length_606_cov_97.760070_g28527_i0forward_frame_1 - 1.1e-05 25.6 0.0 1.6e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SLATT_5 PF18160.1 NODE_35543_length_607_cov_2.169580_g28496_i0reverse_frame_2 - 0.011 15.1 0.0 0.019 14.3 0.0 1.4 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Phage_spike PF18715.1 NODE_35543_length_607_cov_2.169580_g28496_i0reverse_frame_2 - 0.041 14.0 0.1 0.074 13.1 0.1 1.3 1 0 0 1 1 1 0 Phage spike trimer B-block_TFIIIC PF04182.12 NODE_35540_length_607_cov_2.629371_g28493_i0reverse_frame_3 - 0.0034 17.5 0.0 0.0071 16.5 0.0 1.6 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC CLASP_N PF12348.8 NODE_35540_length_607_cov_2.629371_g28493_i0reverse_frame_2 - 1.4e-05 24.8 0.0 2.7e-05 23.9 0.0 1.4 1 1 1 2 2 2 1 CLASP N terminal C1_2 PF03107.16 NODE_35538_length_607_cov_3.195804_g28491_i0forward_frame_2 - 0.02 15.2 10.1 0.42 11.0 1.3 2.2 2 0 0 2 2 2 0 C1 domain DZR PF12773.7 NODE_35538_length_607_cov_3.195804_g28491_i0forward_frame_2 - 0.03 14.3 7.2 0.58 10.2 1.0 2.4 2 0 0 2 2 2 0 Double zinc ribbon HypA PF01155.19 NODE_35538_length_607_cov_3.195804_g28491_i0forward_frame_2 - 0.26 11.3 8.7 0.6 10.1 1.3 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C3HC4_3 PF13920.6 NODE_35538_length_607_cov_3.195804_g28491_i0forward_frame_2 - 0.61 10.0 14.4 0.15 12.0 2.6 2.6 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_9 PF14369.6 NODE_35538_length_607_cov_3.195804_g28491_i0forward_frame_2 - 0.65 10.3 9.9 0.079 13.2 5.0 2.1 2 0 0 2 2 2 0 zinc-ribbon SRP_TPR_like PF17004.5 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.0076 16.3 0.2 0.019 15.0 0.2 1.7 1 0 0 1 1 1 1 Putative TPR-like repeat DHR10 PF18595.1 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.18 11.9 10.8 0.52 10.4 3.2 3.2 2 1 1 3 3 3 0 Designed helical repeat protein 10 domain DUF4407 PF14362.6 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.19 11.0 6.9 0.24 10.7 6.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3450 PF11932.8 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.42 9.9 11.7 0.21 10.9 5.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 0.45 10.0 6.9 0.58 9.7 6.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DASH_Dam1 PF08653.10 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 2.6 7.9 9.9 7 6.5 1.2 3.8 4 0 0 4 4 4 0 DASH complex subunit Dam1 Cep57_MT_bd PF06657.13 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 3.6 8.1 10.8 7.7 7.0 3.0 3.1 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 LMBR1 PF04791.16 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 5.2 5.9 6.7 5.7 5.7 6.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein FlaC_arch PF05377.11 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 6.7 7.2 16.8 12 6.4 3.3 3.9 1 1 2 4 4 4 0 Flagella accessory protein C (FlaC) DUF948 PF06103.11 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 7.5 6.9 9.2 6.3 7.1 5.2 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) TMPIT PF07851.13 NODE_35530_length_607_cov_65.774476_g28483_i0reverse_frame_3 - 9.8 5.3 13.2 4.1 6.5 9.2 1.9 1 1 0 2 2 2 0 TMPIT-like protein Nab2p_Zf1 PF18260.1 NODE_35521_length_607_cov_101.379371_g28474_i0forward_frame_3 - 0.05 13.5 3.8 0.05 13.5 3.8 2.0 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 TFIIA PF03153.13 NODE_35512_length_607_cov_146.234266_g28466_i0reverse_frame_2 - 0.27 11.2 8.2 0.33 10.9 8.2 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit BLI1 PF17324.2 NODE_35501_length_607_cov_277.459790_g28455_i0forward_frame_2 - 0.0063 17.2 1.3 0.012 16.3 0.2 2.0 2 0 0 2 2 2 1 BLOC-1 interactor 1 Thioredoxin_2 PF13098.6 NODE_35501_length_607_cov_277.459790_g28455_i0forward_frame_2 - 0.023 15.1 0.1 0.037 14.5 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like domain DUF1178 PF06676.11 NODE_35501_length_607_cov_277.459790_g28455_i0forward_frame_2 - 0.13 12.6 0.0 0.24 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) OpgC_C PF10129.9 NODE_35498_length_607_cov_332.784965_g28452_i0reverse_frame_3 - 0.012 14.5 0.7 0.016 14.1 0.7 1.2 1 0 0 1 1 1 0 OpgC protein DUF2304 PF10066.9 NODE_35498_length_607_cov_332.784965_g28452_i0reverse_frame_3 - 2 8.7 8.5 0.82 9.9 6.0 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) PrgI PF12666.7 NODE_35477_length_608_cov_3.876091_g28439_i0reverse_frame_2 - 2.4 8.9 7.3 0.95 10.2 4.6 1.6 1 1 0 2 2 2 0 PrgI family protein Pkinase PF00069.25 NODE_35474_length_608_cov_4.567190_g28436_i0reverse_frame_3 - 0.064 12.6 0.1 0.1 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain WD40 PF00400.32 NODE_35467_length_608_cov_78.099476_g28429_i0reverse_frame_2 - 6.8e-09 36.2 0.1 2e-08 34.7 0.1 1.8 1 0 0 1 1 1 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_35467_length_608_cov_78.099476_g28429_i0reverse_frame_2 - 0.00035 20.8 0.0 0.00058 20.1 0.0 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 NODE_35467_length_608_cov_78.099476_g28429_i0reverse_frame_2 - 0.044 12.7 0.0 0.069 12.1 0.0 1.3 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein HTH_32 PF13565.6 NODE_35461_length_608_cov_105.008726_g28423_i0forward_frame_2 - 0.019 15.6 1.8 5.9 7.6 0.2 2.5 2 0 0 2 2 2 0 Homeodomain-like domain DUF3631 PF12307.8 NODE_35461_length_608_cov_105.008726_g28423_i0forward_frame_2 - 0.095 12.9 0.3 10 6.3 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3631) PV-1 PF06637.11 NODE_35458_length_608_cov_116.425829_g18424_i3forward_frame_2 - 0.59 8.9 1.5 0.77 8.5 1.5 1.2 1 0 0 1 1 1 0 PV-1 protein (PLVAP) TaqI_C PF12950.7 NODE_35456_length_608_cov_129.759162_g28420_i0forward_frame_3 - 0.0025 17.9 0.9 0.0044 17.1 0.7 1.5 1 1 0 1 1 1 1 TaqI-like C-terminal specificity domain C_Hendra PF16821.5 NODE_35456_length_608_cov_129.759162_g28420_i0forward_frame_3 - 0.29 11.0 2.8 8.9 6.2 0.1 2.1 2 0 0 2 2 2 0 C protein from hendra and measles viruses L71 PF02448.15 NODE_35454_length_608_cov_144.966841_g28418_i0reverse_frame_3 - 4.5 7.8 6.6 22 5.5 0.5 2.8 2 1 1 3 3 3 0 L71 family Chorion_2 PF03964.15 NODE_35454_length_608_cov_144.966841_g28418_i0forward_frame_3 - 0.38 11.6 3.8 0.27 12.1 1.6 1.8 2 0 0 2 2 2 0 Chorion family 2 Fer4_10 PF13237.6 NODE_35441_length_608_cov_445.082024_g28405_i0forward_frame_2 - 0.0069 16.5 0.1 0.013 15.6 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 NODE_35441_length_608_cov_445.082024_g28405_i0forward_frame_2 - 0.0077 16.3 1.1 0.012 15.7 0.2 1.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain DUF4665 PF15679.5 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.015 15.9 3.4 0.015 15.9 3.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4665) SLX9 PF15341.6 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.016 15.6 3.3 0.03 14.7 3.3 1.4 1 1 0 1 1 1 0 Ribosome biogenesis protein SLX9 CASP_C PF08172.12 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.077 12.3 9.5 0.57 9.5 1.0 2.2 1 1 1 2 2 2 0 CASP C terminal Jnk-SapK_ap_N PF09744.9 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.25 11.5 14.5 0.16 12.2 5.1 2.2 1 1 0 2 2 2 0 JNK_SAPK-associated protein-1 DUF4472 PF14739.6 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 0.43 11.3 13.1 1.8 9.3 6.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) DUF1664 PF07889.12 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 1 9.4 8.2 2.8 8.0 2.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) YabA PF06156.13 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 1.2 9.8 13.0 5.1 7.8 1.6 2.8 1 1 1 2 2 2 0 Initiation control protein YabA HAUS-augmin3 PF14932.6 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 1.6 8.3 11.4 0.42 10.2 2.9 2.1 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Spc7 PF08317.11 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 3.3 6.5 15.2 9.6 5.0 15.2 1.7 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF3552 PF12072.8 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 4.4 6.7 16.1 0.081 12.3 7.9 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF3552) DUF4140 PF13600.6 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 4.5 7.8 10.9 26 5.3 3.5 3.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) APG6_N PF17675.1 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 5.1 7.6 16.3 67 4.0 6.3 2.3 1 1 1 2 2 2 0 Apg6 coiled-coil region PDDEXK_6 PF04720.12 NODE_35429_length_609_cov_3.290941_g28394_i0reverse_frame_3 - 8 6.3 8.1 1 9.3 1.3 2.0 2 0 0 2 2 2 0 PDDEXK-like family of unknown function tRNA_anti-codon PF01336.25 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 0.00049 20.0 0.0 0.00096 19.1 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Gar1 PF04410.14 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 0.48 10.2 10.1 0.86 9.4 10.1 1.4 1 0 0 1 1 1 0 Gar1/Naf1 RNA binding region SLC12 PF03522.15 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 2.8 6.9 9.5 3.4 6.6 9.5 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Presenilin PF01080.17 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 3.9 6.1 7.7 4.1 6.1 7.7 1.1 1 0 0 1 1 1 0 Presenilin EIIBC-GUT_N PF03612.14 NODE_35424_length_609_cov_22.524390_g28389_i0reverse_frame_3 - 5.4 6.7 6.9 9.3 6.0 6.9 1.3 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus TMEM208_SND2 PF05620.11 NODE_35424_length_609_cov_22.524390_g28389_i0forward_frame_3 - 0.37 10.6 2.7 0.67 9.7 2.7 1.5 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 PTS_EIIA_1 PF00358.20 NODE_35418_length_609_cov_80.297909_g28384_i0forward_frame_2 - 0.14 12.0 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VTC PF09359.10 NODE_35413_length_609_cov_95.452962_g28380_i0forward_frame_2 - 0.016 14.6 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 VTC domain Protocadherin PF08374.11 NODE_35390_length_609_cov_394.376307_g28359_i0forward_frame_2 - 0.0089 16.0 0.0 0.0089 16.0 0.0 2.2 2 1 0 2 2 2 1 Protocadherin Med26 PF08711.11 NODE_35389_length_609_cov_397.813589_g21131_i2forward_frame_3 - 0.0092 16.0 0.0 0.0092 16.0 0.0 2.4 2 1 0 2 2 2 1 TFIIS helical bundle-like domain HemY_N PF07219.13 NODE_35389_length_609_cov_397.813589_g21131_i2forward_frame_3 - 3.2 8.0 5.9 4.6 7.5 5.3 1.5 1 1 0 1 1 1 0 HemY protein N-terminus MttA_Hcf106 PF02416.16 NODE_35387_length_609_cov_611.423345_g28357_i0reverse_frame_3 - 0.00015 21.0 4.0 0.00024 20.3 4.0 1.5 1 1 0 1 1 1 1 mttA/Hcf106 family Yip1 PF04893.17 NODE_35387_length_609_cov_611.423345_g28357_i0reverse_frame_3 - 0.064 13.0 0.2 0.079 12.7 0.2 1.1 1 0 0 1 1 1 0 Yip1 domain PuR_N PF09182.10 ORF98119 - 0.062 13.2 0.1 0.1 12.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal Fib_alpha PF08702.10 ORF96229 - 0.0016 18.7 15.1 0.0024 18.1 15.1 1.3 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family Golgin_A5 PF09787.9 ORF96229 - 0.0033 17.0 15.3 0.0044 16.5 15.3 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 FlxA PF14282.6 ORF96229 - 0.0042 17.1 15.8 0.0077 16.2 15.8 1.5 1 0 0 1 1 1 1 FlxA-like protein FYVE_2 PF02318.16 ORF96229 - 0.0072 16.5 13.7 0.0072 16.5 13.7 2.9 1 1 2 3 3 3 1 FYVE-type zinc finger FYVE PF01363.21 ORF96229 - 0.019 15.1 16.9 0.019 15.1 16.9 1.9 2 1 0 2 2 1 0 FYVE zinc finger TPR_MLP1_2 PF07926.12 ORF96229 - 0.026 14.6 9.1 0.039 14.0 9.1 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Snapin_Pallidin PF14712.6 ORF96229 - 0.027 14.9 7.8 1 9.8 1.6 2.6 2 0 0 2 2 2 0 Snapin/Pallidin V_ATPase_I PF01496.19 ORF96229 - 0.032 12.2 10.8 0.039 11.9 10.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3450 PF11932.8 ORF96229 - 0.05 12.9 8.9 0.069 12.4 8.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) PI3K_P85_iSH2 PF16454.5 ORF96229 - 0.069 12.8 13.6 0.29 10.7 11.2 2.0 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Laminin_II PF06009.12 ORF96229 - 0.092 12.8 8.7 0.15 12.1 8.7 1.3 1 0 0 1 1 1 0 Laminin Domain II Prefoldin_2 PF01920.20 ORF96229 - 0.1 12.6 16.4 0.23 11.4 7.4 2.4 1 1 1 2 2 2 0 Prefoldin subunit DASH_Spc19 PF08287.11 ORF96229 - 0.15 12.0 7.9 0.21 11.5 7.9 1.2 1 0 0 1 1 1 0 Spc19 UPF0242 PF06785.11 ORF96229 - 0.16 12.1 11.8 0.21 11.7 11.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FlaC_arch PF05377.11 ORF96229 - 0.16 12.4 10.9 3.1 8.3 2.4 2.8 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF812 PF05667.11 ORF96229 - 0.19 10.6 18.4 0.38 9.6 18.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF812) LMBR1 PF04791.16 ORF96229 - 0.22 10.4 8.3 0.27 10.1 8.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Atg14 PF10186.9 ORF96229 - 0.3 10.1 12.0 0.39 9.8 12.0 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PRKG1_interact PF15898.5 ORF96229 - 0.35 11.8 10.0 0.59 11.1 10.0 1.3 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain TEX13 PF15186.6 ORF96229 - 0.4 10.4 7.1 0.64 9.7 7.1 1.3 1 0 0 1 1 1 0 Testis-expressed sequence 13 protein family CENP-H PF05837.12 ORF96229 - 0.46 10.9 10.0 0.61 10.5 9.3 1.6 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DUF4200 PF13863.6 ORF96229 - 0.47 10.9 17.8 0.7 10.3 17.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) DUF4140 PF13600.6 ORF96229 - 0.47 10.9 10.0 2.8 8.4 4.9 2.2 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF724 PF05266.14 ORF96229 - 0.52 10.1 11.3 0.85 9.4 11.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) HMMR_N PF15905.5 ORF96229 - 0.62 9.5 18.4 0.79 9.1 18.4 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal ABC_tran_CTD PF16326.5 ORF96229 - 1 9.7 9.4 3.5 8.0 3.5 2.4 2 0 0 2 2 2 0 ABC transporter C-terminal domain COG5 PF10392.9 ORF96229 - 1 9.5 7.5 2.6 8.2 1.6 2.2 1 1 1 2 2 2 0 Golgi transport complex subunit 5 DUF2205 PF10224.9 ORF96229 - 1.5 8.9 11.4 0.33 11.0 3.6 2.3 1 1 1 2 2 2 0 Short coiled-coil protein Csm1_N PF18504.1 ORF96229 - 1.8 9.0 13.3 1.6 9.1 3.1 2.5 1 1 1 2 2 2 0 Csm1 N-terminal domain Syntaxin-6_N PF09177.11 ORF96229 - 1.8 9.1 11.2 18 5.9 11.2 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF948 PF06103.11 ORF96229 - 2 8.7 9.4 6.9 7.0 2.7 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 ORF96229 - 2.4 8.2 14.3 0.42 10.6 2.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4407 PF14362.6 ORF96229 - 4.1 6.7 10.6 5.4 6.3 10.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) APG6_N PF17675.1 ORF96229 - 7.3 7.1 15.7 0.12 12.9 8.7 1.5 2 0 0 2 2 1 0 Apg6 coiled-coil region TolA_bind_tri PF16331.5 ORF96229 - 9.7 6.4 12.2 11 6.2 0.6 2.3 1 1 1 2 2 2 0 TolA binding protein trimerisation zf-Sec23_Sec24 PF04810.15 ORF94146 - 1.3e-07 31.5 5.9 3.8e-07 30.0 5.9 1.8 1 1 0 1 1 1 1 Sec23/Sec24 zinc finger Peptidase_S74 PF13884.6 ORF92835 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase DUF1995 PF09353.10 ORF92587 - 0.00025 21.1 0.2 0.00032 20.8 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1995) Pyr_redox_2 PF07992.14 ORF91758 - 0.0051 16.1 0.0 0.12 11.6 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Homeodomain PF00046.29 ORF91105 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF91105 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 p450 PF00067.22 ORF9009 - 7.5e-09 34.8 0.0 1.1e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Flu_M1 PF00598.19 ORF9009 - 0.064 12.8 0.0 0.091 12.3 0.0 1.2 1 0 0 1 1 1 0 Influenza Matrix protein (M1) DUF3325 PF11804.8 ORF8787 - 0.057 13.6 0.4 0.23 11.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3325) SRTM1 PF15872.5 ORF86423 - 0.63 10.2 4.6 0.38 10.9 0.2 2.4 2 1 0 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 PRT_C PF08372.10 ORF85046 - 0.029 14.1 1.4 0.037 13.8 0.7 1.6 1 1 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal Crisp PF08562.10 ORF85046 - 0.15 12.7 1.4 0.22 12.2 1.4 1.2 1 0 0 1 1 1 0 Crisp Ank_4 PF13637.6 ORF84929 - 1.4e-13 51.0 0.8 3.8e-08 33.7 0.1 3.1 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF84929 - 8.3e-13 48.7 10.6 1.1e-07 32.4 0.7 2.4 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF84929 - 2e-09 37.4 0.8 0.0002 21.7 0.1 3.0 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF84929 - 6.1e-09 35.4 0.9 0.0007 19.9 0.1 4.4 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF84929 - 1.2e-08 35.1 0.1 1.6e-05 25.1 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Rhodanese_C PF12368.8 ORF84929 - 0.37 11.2 3.8 0.69 10.3 3.8 1.4 1 0 0 1 1 1 0 Rhodanase C-terminal GRAM PF02893.20 ORF84409 - 0.025 14.5 0.0 0.063 13.2 0.0 1.6 2 1 0 2 2 2 0 GRAM domain MORN PF02493.20 ORF83553 - 4.9e-06 26.1 16.5 0.00013 21.6 3.1 4.0 4 1 0 4 4 4 2 MORN repeat Homeodomain PF00046.29 ORF81006 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF81006 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 PDH PF02153.17 ORF72312 - 0.064 12.2 0.0 0.093 11.7 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase GATase PF00117.28 ORF69514 - 5.3e-18 65.5 0.0 6.5e-18 65.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 ORF69514 - 7.5e-07 29.2 0.0 0.001 19.0 0.0 2.0 2 0 0 2 2 2 2 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 ORF69514 - 1.7e-05 24.7 0.5 0.017 14.8 0.1 2.2 2 0 0 2 2 2 2 Peptidase C26 GATase_3 PF07685.14 ORF69514 - 5.9e-05 22.8 0.0 8e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Homeodomain PF00046.29 ORF68476 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF68476 - 0.4 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 Red1 PF07964.11 ORF67103 - 8.4 4.5 17.2 9.6 4.3 17.2 1.0 1 0 0 1 1 1 0 Rec10 / Red1 PCP PF02429.15 ORF64939 - 1.7e-60 203.6 8.3 2.1e-60 203.3 8.3 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF732 PF05305.14 ORF64939 - 0.047 14.1 2.6 0.07 13.5 1.3 2.0 1 1 2 3 3 3 0 Protein of unknown function (DUF732) PilS PF08805.11 ORF6479 - 0.035 13.9 0.1 0.054 13.3 0.1 1.4 1 0 0 1 1 1 0 PilS N terminal RnlB_antitoxin PF15933.5 ORF6479 - 0.04 14.2 0.3 0.04 14.2 0.3 2.7 2 1 0 2 2 2 0 Antitoxin to bacterial toxin RNase LS or RnlA NBD94 PF16830.5 ORF6479 - 2.8 8.4 8.7 0.18 12.2 2.3 2.1 2 0 0 2 2 2 0 Nucleotide-Binding Domain 94 of RH Homeodomain PF00046.29 ORF64761 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF64761 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 SRP_SPB PF02978.19 ORF62819 - 2.9e-08 34.2 0.1 2.9e-08 34.2 0.1 1.9 3 0 0 3 3 3 1 Signal peptide binding domain HEPN_STY4199 PF18729.1 ORF62819 - 0.019 14.2 0.1 0.044 13.0 0.0 1.6 1 1 0 1 1 1 0 STY4199-like HEPN Com_YlbF PF06133.11 ORF62819 - 3.4 8.3 6.9 1.2 9.8 0.7 2.3 2 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA Prolamin_like PF05617.11 ORF62315 - 0.055 13.6 0.1 0.055 13.6 0.1 1.8 2 0 0 2 2 2 0 Prolamin-like EF-hand_6 PF13405.6 ORF61721 - 0.00096 18.9 0.4 0.15 12.1 0.2 2.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF61721 - 0.015 14.8 1.9 0.33 10.6 0.2 3.1 3 0 0 3 3 3 0 EF hand Phage_int_SAM_4 PF13495.6 ORF61721 - 0.041 14.4 0.0 0.07 13.6 0.0 1.4 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain UPF0154 PF03672.13 ORF61721 - 0.13 12.3 0.0 0.28 11.3 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) EF-hand_7 PF13499.6 ORF61721 - 0.31 11.5 3.9 0.91 10.0 2.5 2.4 2 1 0 2 2 2 0 EF-hand domain pair Ras PF00071.22 ORF60665 - 1.7e-65 219.6 1.0 1.9e-65 219.4 1.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF60665 - 8.2e-36 122.9 0.5 1.4e-35 122.1 0.1 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF60665 - 2.5e-16 59.6 0.1 3.2e-16 59.3 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF60665 - 2.7e-06 27.4 0.6 0.042 13.7 0.1 2.3 1 1 1 2 2 2 2 RsgA GTPase SRPRB PF09439.10 ORF60665 - 5.1e-06 26.0 0.1 8.2e-06 25.4 0.1 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF60665 - 1.5e-05 24.4 0.2 1.8e-05 24.2 0.2 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF60665 - 5.3e-05 23.3 0.0 0.00038 20.5 0.0 1.9 1 1 1 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF60665 - 0.0054 16.3 0.3 0.012 15.2 0.1 1.6 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AAA_16 PF13191.6 ORF60665 - 0.012 16.1 0.0 0.028 14.8 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 ORF60665 - 0.021 15.2 0.1 0.62 10.5 0.0 2.2 1 1 1 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF60665 - 0.021 15.1 0.0 0.049 13.9 0.0 1.6 1 1 1 2 2 2 0 AAA domain TniB PF05621.11 ORF60665 - 0.024 14.0 0.0 0.052 13.0 0.0 1.7 2 0 0 2 2 2 0 Bacterial TniB protein AAA_7 PF12775.7 ORF60665 - 0.03 13.8 0.0 0.094 12.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_29 PF13555.6 ORF60665 - 0.066 13.0 0.0 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 ORF60665 - 0.07 13.1 0.0 0.1 12.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) PduV-EutP PF10662.9 ORF60665 - 0.082 12.7 0.2 11 5.8 0.0 2.4 1 1 1 2 2 2 0 Ethanolamine utilisation - propanediol utilisation PhyH PF05721.13 ORF60665 - 0.14 12.4 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) ABC_tran PF00005.27 ORF60665 - 0.17 12.4 0.0 0.26 11.8 0.0 1.6 1 1 0 1 1 1 0 ABC transporter Peptidase_S74 PF13884.6 ORF60188 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Dynein_light PF01221.18 ORF5869 - 3e-06 27.4 0.0 4.5e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Dynein light chain type 1 PDH PF02153.17 ORF58502 - 0.064 12.2 0.0 0.093 11.7 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase Dermcidin PF15291.6 ORF56194 - 0.12 12.9 0.3 0.85 10.2 0.0 2.3 2 1 0 2 2 2 0 Dermcidin, antibiotic peptide DUF2981 PF11200.8 ORF56160 - 4.2 7.0 5.8 4.8 6.8 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) MDFI PF15316.6 ORF56160 - 5.5 7.0 10.0 4.4 7.3 8.4 1.7 1 1 0 1 1 1 0 MyoD family inhibitor Pkinase PF00069.25 ORF53817 - 2.2e-56 191.1 1.0 2.4e-56 191.0 1.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF53817 - 8.1e-29 100.7 0.1 9.4e-29 100.5 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF53817 - 6.2e-07 29.0 0.0 1.1e-06 28.2 0.0 1.4 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF53817 - 8.3e-06 24.8 0.0 1.2e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF53817 - 3.5e-05 22.9 0.2 4.5e-05 22.6 0.2 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF53817 - 0.0025 17.2 0.4 0.011 15.1 0.1 2.0 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF53817 - 0.0034 17.3 0.0 0.0049 16.8 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF53817 - 0.021 13.9 0.1 0.028 13.5 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 RIO1 PF01163.22 ORF53817 - 0.042 13.4 0.2 0.095 12.3 0.1 1.6 2 0 0 2 2 2 0 RIO1 family C1q PF00386.21 ORF51757 - 0.064 13.5 0.1 0.12 12.5 0.0 1.5 2 0 0 2 2 2 0 C1q domain Pollen_allerg_1 PF01357.21 ORF51757 - 0.071 13.1 1.6 2 8.5 0.1 2.4 1 1 1 2 2 2 0 Pollen allergen Mito_carr PF00153.27 ORF51456 - 8.4e-06 25.6 0.0 2.5e-05 24.1 0.0 1.7 1 1 1 2 2 2 1 Mitochondrial carrier protein OB_NTP_bind PF07717.16 ORF50567 - 2e-05 24.8 0.1 4.4e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 ORF50567 - 0.018 15.4 0.0 0.043 14.2 0.0 1.5 2 0 0 2 2 2 0 Helicase conserved C-terminal domain Vpu PF00558.19 ORF49514 - 0.061 13.1 1.2 0.12 12.2 1.2 1.4 1 0 0 1 1 1 0 Vpu protein Phage_integrase PF00589.22 ORF47312 - 0.0065 16.3 0.0 0.07 12.9 0.0 2.1 1 1 0 1 1 1 1 Phage integrase family Gly_kinase PF02595.15 ORF43383 - 3.8e-50 170.9 1.1 4.2e-50 170.8 1.1 1.0 1 0 0 1 1 1 1 Glycerate kinase family SPATA24 PF15175.6 ORF43359 - 0.8 9.6 6.7 2.8 7.8 6.7 1.8 1 1 0 1 1 1 0 Spermatogenesis-associated protein 24 Ham1p_like PF01725.16 ORF43105 - 0.012 15.6 0.7 0.019 14.9 0.7 1.4 1 0 0 1 1 1 0 Ham1 family YqzH PF14164.6 ORF43105 - 0.018 15.1 1.7 0.049 13.7 0.8 2.2 1 1 1 2 2 2 0 YqzH-like protein FAD_binding_9 PF08021.11 ORF43105 - 0.035 14.3 0.1 0.06 13.6 0.1 1.4 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain DUF2631 PF10939.8 ORF4302 - 0.19 11.6 2.1 0.86 9.5 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2631) bZIP_1 PF00170.21 ORF43002 - 1.7e-06 28.0 15.7 6.8e-06 26.1 15.5 2.1 1 1 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF43002 - 0.0003 20.8 7.2 0.0003 20.8 7.2 2.4 3 0 0 3 3 3 1 Basic region leucine zipper HR1 PF02185.16 ORF43002 - 0.0037 17.4 1.0 1.2 9.3 4.0 2.4 2 0 0 2 2 2 1 Hr1 repeat Pox_A_type_inc PF04508.12 ORF43002 - 0.0063 16.3 0.8 0.016 15.0 0.8 1.8 1 0 0 1 1 1 1 Viral A-type inclusion protein repeat Seryl_tRNA_N PF02403.22 ORF43002 - 0.018 15.3 3.3 2.3 8.5 4.8 2.5 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Med4 PF10018.9 ORF43002 - 0.019 14.6 0.9 0.026 14.2 0.9 1.4 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Cortex-I_coil PF09304.10 ORF43002 - 0.032 14.4 3.4 0.032 14.4 3.4 1.9 2 0 0 2 2 2 0 Cortexillin I, coiled coil Med7 PF05983.11 ORF43002 - 0.039 14.0 1.2 0.095 12.8 1.2 1.7 1 0 0 1 1 1 0 MED7 protein Ead_Ea22 PF13935.6 ORF43002 - 0.047 14.4 0.5 0.093 13.4 0.6 1.5 1 1 0 1 1 1 0 Ead/Ea22-like protein Uds1 PF15456.6 ORF43002 - 0.048 13.8 3.5 0.059 13.5 2.6 1.6 1 1 0 1 1 1 0 Up-regulated During Septation PLAC9 PF15205.6 ORF43002 - 0.064 13.7 0.1 0.13 12.7 0.1 1.4 1 0 0 1 1 1 0 Placenta-specific protein 9 PHM7_cyt PF14703.6 ORF43002 - 0.085 13.1 4.2 0.18 12.0 4.2 1.6 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter bZIP_Maf PF03131.17 ORF43002 - 0.19 12.2 7.6 0.42 11.2 7.6 1.6 1 1 0 1 1 1 0 bZIP Maf transcription factor Swi5 PF07061.11 ORF43002 - 0.22 11.6 3.6 0.21 11.7 1.5 2.0 2 0 0 2 2 2 0 Swi5 DUF3347 PF11827.8 ORF43002 - 0.37 10.9 3.3 0.5 10.5 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3347) Atg14 PF10186.9 ORF43002 - 0.47 9.5 5.9 0.65 9.0 5.9 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5320 PF17253.2 ORF43002 - 0.49 11.5 2.5 1 10.5 2.5 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5320) FlxA PF14282.6 ORF43002 - 0.72 9.9 7.1 0.14 12.2 2.5 2.1 2 1 0 2 2 2 0 FlxA-like protein FlaC_arch PF05377.11 ORF43002 - 0.8 10.1 4.5 4.4 7.8 2.6 2.9 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) Peptidase_S74 PF13884.6 ORF42652 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase DUF2576 PF10845.8 ORF37490 - 0.022 14.4 0.3 0.068 12.8 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) FA_desaturase PF00487.24 ORF36243 - 0.82 9.4 4.4 0.31 10.9 1.3 1.8 2 1 0 2 2 2 0 Fatty acid desaturase Homeodomain PF00046.29 ORF35514 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF35514 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 LptE PF04390.12 ORF3537 - 7.4e-14 52.4 0.1 1.1e-13 51.8 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide-assembly Chor_lyase PF04345.13 ORF32927 - 1.7e-30 105.9 0.0 2.1e-30 105.6 0.0 1.1 1 0 0 1 1 1 1 Chorismate lyase UTRA PF07702.13 ORF32927 - 0.047 13.6 0.0 0.13 12.1 0.0 1.8 1 1 1 2 2 2 0 UTRA domain FSA_C PF10479.9 ORF29143 - 9 4.3 15.6 11 4.0 15.6 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus ILVD_EDD PF00920.21 ORF27842 - 0.077 11.6 0.6 0.088 11.4 0.6 1.1 1 0 0 1 1 1 0 Dehydratase family WW PF00397.26 ORF24664 - 5.7e-09 35.9 0.1 1e-08 35.1 0.1 1.5 1 0 0 1 1 1 1 WW domain MORN PF02493.20 ORF24473 - 1.1e-30 103.6 35.3 5.3e-08 32.3 1.7 6.5 6 0 0 6 6 6 5 MORN repeat Tudor_2 PF18104.1 ORF24473 - 0.034 13.8 6.0 14 5.4 0.0 4.3 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain Otopetrin PF03189.13 ORF24473 - 0.079 11.8 0.0 0.079 11.8 0.0 1.1 1 0 0 1 1 1 0 Otopetrin Homeodomain PF00046.29 ORF23067 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF23067 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks115.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks115.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks115.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks115.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SIR2 PF02146.17 ORF21587 - 0.094 12.6 0.3 0.15 12.0 0.3 1.3 1 0 0 1 1 1 0 Sir2 family ALG11_N PF15924.5 ORF21317 - 0.082 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus LexA_DNA_bind PF01726.16 ORF17508 - 8.7e-32 108.7 0.1 1.4e-31 108.1 0.1 1.3 1 0 0 1 1 1 1 LexA DNA binding domain Peptidase_S24 PF00717.23 ORF17508 - 3.3e-16 59.0 0.8 4.8e-16 58.5 0.8 1.3 1 0 0 1 1 1 1 Peptidase S24-like Rrf2 PF02082.20 ORF17508 - 0.00044 20.5 0.0 0.00094 19.5 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_20 PF12840.7 ORF17508 - 0.00056 19.9 0.0 0.0012 18.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 ORF17508 - 0.00094 19.1 0.1 0.0021 18.0 0.1 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Sigma70_r4 PF04545.16 ORF17508 - 0.019 14.5 0.1 0.09 12.3 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_11 PF08279.12 ORF17508 - 0.026 14.5 0.1 0.26 11.2 0.0 2.3 2 0 0 2 2 2 0 HTH domain HTH_24 PF13412.6 ORF17508 - 0.091 12.3 0.3 0.3 10.7 0.0 2.1 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding GHMP_kinases_C PF08544.13 ORF17257 - 3.4e-06 27.3 0.0 5.2e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 GHMP kinases C terminal EF-hand_8 PF13833.6 ORF15572 - 1.9e-07 30.8 0.2 8.4e-07 28.7 0.1 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF15572 - 1.2e-06 28.8 2.0 0.0001 22.6 0.1 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF15572 - 0.00021 20.6 0.9 0.0005 19.4 0.2 2.1 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF15572 - 0.0022 17.8 2.4 0.082 12.9 0.1 3.0 3 0 0 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 ORF15572 - 0.079 12.5 0.0 0.18 11.3 0.0 1.6 1 0 0 1 1 1 0 EF hand Homeodomain PF00046.29 ORF151044 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF151044 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 DOT1 PF08123.13 ORF148241 - 7.7e-07 28.8 0.0 1.3e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 Histone methylation protein DOT1 CMAS PF02353.20 ORF148241 - 0.037 13.3 0.0 0.046 13.0 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase GidB PF02527.15 ORF148241 - 0.085 12.2 0.0 0.15 11.3 0.0 1.4 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G DUF1752 PF08550.10 ORF147537 - 0.095 12.6 0.6 0.095 12.6 0.6 2.7 3 0 0 3 3 3 0 Fungal protein of unknown function (DUF1752) Chloroplast_duf PF14476.6 ORF146985 - 0.22 10.5 0.0 0.28 10.1 0.0 1.1 1 0 0 1 1 1 0 Petal formation-expressed FAST_1 PF06743.15 ORF144754 - 0.055 13.4 0.0 2.9 7.9 0.0 2.9 2 1 1 3 3 3 0 FAST kinase-like protein, subdomain 1 DUF3958 PF13125.6 ORF142474 - 0.46 10.7 6.1 0.11 12.7 2.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3958) DUF3228 PF11539.8 ORF142275 - 2.8e-83 278.2 0.1 3.2e-83 278.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3228) Homeodomain PF00046.29 ORF141234 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF141234 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 Homeodomain PF00046.29 ORF138440 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF138440 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 ADP_ribosyl_GH PF03747.14 ORF136047 - 1.4e-31 110.3 1.3 1.6e-31 110.1 1.3 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase CAS_C PF12026.8 ORF135923 - 0.039 14.0 0.9 2.2 8.3 0.2 2.8 2 1 1 3 3 3 0 Crk-Associated Substrate C-terminal domain Hydrolase_4 PF12146.8 ORF133505 - 3.1e-05 23.4 0.0 0.076 12.3 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF133505 - 0.00027 20.7 0.0 0.013 15.1 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 ORF133505 - 0.0004 19.9 0.0 0.0083 15.6 0.0 2.0 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 ORF133505 - 0.00081 19.3 0.1 0.0033 17.3 0.0 2.0 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase FSH1 PF03959.13 ORF133505 - 0.006 16.3 0.0 0.0066 16.1 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Asp2 PF16929.5 ORF133505 - 0.11 11.4 0.0 0.21 10.5 0.0 1.4 1 1 1 2 2 2 0 Accessory Sec system GspB-transporter Homeodomain PF00046.29 ORF131360 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF131360 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 Ribosomal_L4 PF00573.22 ORF129158 - 0.1 12.3 0.2 0.14 11.8 0.2 1.3 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family Homeodomain PF00046.29 ORF127954 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF127954 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 SGP PF17228.2 ORF126295 - 0.022 15.6 37.7 0.043 14.7 8.4 4.0 1 1 2 3 3 3 0 Sulphur globule protein EF-hand_1 PF00036.32 ORF123720 - 2.9e-21 73.4 8.1 4.2e-07 29.0 0.1 4.6 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF123720 - 1.1e-18 67.4 11.4 2e-09 37.8 0.3 2.9 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF123720 - 7.4e-18 62.9 9.2 0.0001 22.0 0.1 4.6 5 0 0 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 ORF123720 - 1.3e-14 52.9 3.5 0.0002 20.7 0.0 4.7 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF123720 - 6.3e-09 35.6 8.3 1e-06 28.5 0.3 4.1 3 1 1 4 4 4 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF123720 - 0.00082 19.7 0.0 0.58 10.5 0.0 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF123720 - 0.0046 16.9 1.8 1.9 8.5 0.0 3.1 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF123720 - 0.019 15.3 1.5 4.4 7.7 0.0 3.6 2 1 1 3 3 3 0 EF-hand domain Caleosin PF05042.13 ORF123720 - 0.061 13.3 0.5 1.1 9.1 0.0 2.9 3 1 1 4 4 4 0 Caleosin related protein B_solenoid_dext PF18841.1 ORF123720 - 0.38 11.1 3.8 11 6.4 0.1 2.6 2 0 0 2 2 2 0 Beta solenoid repeat from Dextranase Dockerin_1 PF00404.18 ORF123720 - 2.6 8.3 8.0 0.34 11.1 0.4 3.2 3 1 1 4 4 4 0 Dockerin type I domain C2 PF00168.30 ORF121686 - 1.1e-13 51.4 0.0 1.6e-13 50.8 0.0 1.3 1 0 0 1 1 1 1 C2 domain WWE PF02825.20 ORF121686 - 1.9e-06 28.4 0.0 4.7e-06 27.1 0.0 1.7 2 0 0 2 2 2 1 WWE domain Alpha-amylase PF00128.24 ORF120878 - 0.034 13.7 1.4 0.045 13.3 1.4 1.0 1 0 0 1 1 1 0 Alpha amylase, catalytic domain DUF5100 PF17029.5 ORF120522 - 0.12 12.2 0.0 2.1 8.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5100) Peptidase_S74 PF13884.6 ORF119418 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase DUF5100 PF17029.5 ORF119385 - 0.068 13.0 0.0 2.1 8.2 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5100) Sel1 PF08238.12 ORF114943 - 1.8e-18 66.5 9.4 1.9e-08 34.7 0.2 3.8 4 0 0 4 4 4 3 Sel1 repeat Herpes_ori_bp PF02399.15 ORF114943 - 0.035 12.2 0.0 0.045 11.8 0.0 1.0 1 0 0 1 1 1 0 Origin of replication binding protein DUF4406 PF14359.6 ORF114943 - 0.048 14.1 0.0 0.085 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4406) Peptidase_S74 PF13884.6 ORF114075 - 2.5e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Vpu PF00558.19 ORF113734 - 0.06 13.1 1.2 0.12 12.2 1.2 1.4 1 0 0 1 1 1 0 Vpu protein Homeodomain PF00046.29 ORF112549 - 0.00023 21.0 1.2 0.00057 19.7 1.2 1.7 1 0 0 1 1 1 1 Homeodomain Sec62 PF03839.16 ORF112549 - 0.39 10.2 5.3 0.6 9.6 5.3 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 zf-C2H2_10 PF16588.5 ORF112016 - 0.00083 19.0 9.8 0.18 11.6 2.4 2.4 2 0 0 2 2 2 2 C2H2 zinc-finger zf-CCHC_4 PF14392.6 ORF112016 - 0.0011 18.7 5.3 0.18 11.5 0.6 2.4 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC PF00098.23 ORF112016 - 0.0019 18.2 3.2 0.0019 18.2 3.2 2.5 3 0 0 3 3 3 1 Zinc knuckle DnaJ_CXXCXGXG PF00684.19 ORF112016 - 0.013 15.9 6.2 0.023 15.0 6.2 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF5351 PF17302.2 ORF112016 - 0.061 13.5 6.4 0.22 11.7 1.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5351) TMEM239 PF15841.5 ORF112016 - 7.8 6.4 8.0 10 6.0 8.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 239 family Peptidase_S74 PF13884.6 ORF111298 - 2.4e-07 30.9 0.0 4.7e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase YjbF PF11102.8 ORF108926 - 4.9e-52 176.4 1.0 5.8e-52 176.2 1.0 1.1 1 0 0 1 1 1 1 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF RabGAP-TBC PF00566.18 ORF104532 - 5.6e-47 160.2 3.5 9.6e-47 159.4 3.5 1.4 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Rhodanese PF00581.20 ORF102618 - 0.00044 20.7 0.0 0.00068 20.1 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain OTT_1508_deam PF14441.6 NODE_35828_length_601_cov_74.180212_g28745_i0forward_frame_1 - 0.46 10.5 15.9 2.5 8.2 5.2 2.5 2 0 0 2 2 2 0 OTT_1508-like deaminase PPR PF01535.20 NODE_35818_length_601_cov_120.537102_g28735_i0forward_frame_1 - 0.091 13.0 0.4 0.22 11.8 0.4 1.8 1 0 0 1 1 1 0 PPR repeat IBR PF01485.21 NODE_35816_length_601_cov_138.471731_g28733_i0forward_frame_1 - 0.00054 20.1 1.1 0.0014 18.8 1.1 1.7 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain zf-C3HC4_2 PF13923.6 NODE_35816_length_601_cov_138.471731_g28733_i0forward_frame_1 - 0.14 12.0 4.3 0.41 10.5 4.3 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) FYVE PF01363.21 NODE_35816_length_601_cov_138.471731_g28733_i0forward_frame_1 - 0.27 11.4 5.2 0.27 11.4 3.6 2.0 1 1 1 2 2 2 0 FYVE zinc finger zf-C3HC4_4 PF15227.6 NODE_35816_length_601_cov_138.471731_g28733_i0forward_frame_1 - 0.96 9.7 6.4 6.9 6.9 3.5 2.9 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING PHD PF00628.29 NODE_35816_length_601_cov_138.471731_g28733_i0forward_frame_1 - 1.3 8.9 7.7 0.49 10.3 4.4 1.9 2 0 0 2 2 2 0 PHD-finger Dimer_Tnp_hAT PF05699.14 NODE_35811_length_601_cov_189.270318_g28728_i0reverse_frame_1 - 1.7 8.5 4.9 1.5 8.7 3.1 1.7 2 0 0 2 2 2 0 hAT family C-terminal dimerisation region PA26 PF04636.13 NODE_35798_length_601_cov_779.871025_g26255_i1reverse_frame_1 - 0.034 13.1 0.0 0.041 12.8 0.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) Tmemb_9 PF05434.11 NODE_35798_length_601_cov_779.871025_g26255_i1reverse_frame_1 - 0.056 13.3 0.1 0.086 12.7 0.1 1.2 1 0 0 1 1 1 0 TMEM9 OAD_gamma PF04277.13 NODE_35798_length_601_cov_779.871025_g26255_i1reverse_frame_1 - 0.13 12.9 0.0 0.25 12.0 0.0 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain MAPEG PF01124.18 NODE_35796_length_601_cov_994.397527_g28674_i1reverse_frame_1 - 2.6e-09 37.1 0.1 3.3e-09 36.7 0.1 1.3 1 0 0 1 1 1 1 MAPEG family Phage_Coat_B PF05356.11 NODE_35796_length_601_cov_994.397527_g28674_i1reverse_frame_1 - 0.15 12.0 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 Phage Coat protein B Ribosomal_L41 PF05162.13 NODE_35795_length_601_cov_2070.060071_g28717_i0reverse_frame_1 - 0.13 12.4 22.6 0.18 11.9 22.6 1.2 1 0 0 1 1 1 0 Ribosomal protein L41 Ank_2 PF12796.7 NODE_35769_length_602_cov_141.516755_g28694_i0reverse_frame_1 - 0.00017 22.1 0.1 0.0003 21.3 0.1 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_35769_length_602_cov_141.516755_g28694_i0reverse_frame_1 - 0.0095 16.4 0.3 0.22 12.2 0.0 2.8 3 0 0 3 3 3 1 Ankyrin repeat AraC_binding_2 PF14525.6 NODE_35769_length_602_cov_141.516755_g28694_i0reverse_frame_1 - 0.039 13.6 7.9 0.049 13.3 7.9 1.2 1 0 0 1 1 1 0 AraC-binding-like domain Ank_4 PF13637.6 NODE_35769_length_602_cov_141.516755_g28694_i0reverse_frame_1 - 0.14 12.8 0.0 0.33 11.6 0.0 1.6 1 1 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 NODE_35769_length_602_cov_141.516755_g28694_i0reverse_frame_1 - 0.43 11.1 4.0 1 9.9 0.1 2.5 2 1 0 2 2 2 0 Ankyrin repeat Atrophin-1 PF03154.15 NODE_35768_length_602_cov_147.837743_g28693_i0reverse_frame_1 - 0.011 14.0 4.2 0.013 13.9 4.2 1.1 1 0 0 1 1 1 0 Atrophin-1 family DUF1635 PF07795.11 NODE_35768_length_602_cov_147.837743_g28693_i0reverse_frame_1 - 0.11 12.3 7.4 0.082 12.8 5.9 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1635) LMBR1 PF04791.16 NODE_35768_length_602_cov_147.837743_g28693_i0reverse_frame_1 - 0.45 9.4 8.8 0.51 9.2 8.8 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4106 PF13388.6 NODE_35754_length_602_cov_274.536155_g28679_i0reverse_frame_1 - 0.2 10.9 3.5 0.27 10.4 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) Porin_3 PF01459.22 NODE_35736_length_603_cov_29.457746_g28662_i0forward_frame_1 - 2.2e-21 76.5 3.1 2.8e-21 76.2 3.1 1.1 1 0 0 1 1 1 1 Eukaryotic porin Methyltransf_24 PF13578.6 NODE_35721_length_603_cov_125.063380_g28648_i0reverse_frame_1 - 2.1e-11 44.8 0.0 3.9e-11 43.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Hepcidin PF06446.12 NODE_35720_length_603_cov_132.220070_g28647_i0reverse_frame_1 - 0.0083 16.5 1.9 0.019 15.4 0.3 2.2 2 0 0 2 2 2 1 Hepcidin ABC2_membrane_3 PF12698.7 NODE_35694_length_603_cov_5076.001761_g22939_i2forward_frame_1 - 2.4 7.2 5.9 2.8 7.0 5.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein FlaC_arch PF05377.11 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.0019 18.6 7.9 1.8 9.0 0.1 3.6 3 1 0 3 3 3 2 Flagella accessory protein C (FlaC) Laminin_II PF06009.12 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.012 15.6 5.6 0.064 13.3 1.9 2.1 2 0 0 2 2 2 0 Laminin Domain II CLZ PF16526.5 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.043 14.2 3.2 0.83 10.1 0.2 3.0 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF1664 PF07889.12 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.061 13.4 3.1 0.37 10.8 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) BRE1 PF08647.11 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.12 12.5 10.6 1.8 8.7 3.2 2.6 2 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase LMBR1 PF04791.16 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.65 8.8 3.6 0.77 8.6 3.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein BST2 PF16716.5 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 0.81 10.3 6.8 0.62 10.7 1.0 2.8 2 2 0 2 2 2 0 Bone marrow stromal antigen 2 FlxA PF14282.6 NODE_35679_length_604_cov_77.551845_g28614_i0reverse_frame_3 - 1.7 8.7 6.3 1.5 8.9 2.2 2.3 2 1 0 2 2 2 0 FlxA-like protein CENP-N PF05238.13 NODE_35675_length_604_cov_90.702988_g28610_i0reverse_frame_2 - 0.024 14.0 0.3 0.025 13.9 0.3 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like zf-RING_4 PF14570.6 NODE_35657_length_605_cov_2.892982_g28596_i0forward_frame_3 - 0.093 12.5 0.7 0.093 12.5 0.7 2.2 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain PerB PF06590.11 NODE_35650_length_605_cov_45.800000_g28589_i0reverse_frame_3 - 0.21 12.1 5.1 5.8 7.4 0.2 2.3 1 1 1 2 2 2 0 PerB protein PLA1 PF02253.15 NODE_35646_length_605_cov_79.678947_g28585_i0forward_frame_3 - 2.4 7.7 3.5 4.5 6.8 0.4 2.0 2 0 0 2 2 2 0 Phospholipase A1 DUF3652 PF12372.8 NODE_35628_length_605_cov_177.468421_g28567_i0reverse_frame_3 - 0.0011 18.8 0.2 0.0027 17.6 0.2 1.7 1 0 0 1 1 1 1 Huntingtin protein region Abhydro_lipase PF04083.16 NODE_35621_length_605_cov_281.636842_g28559_i1reverse_frame_3 - 2.6e-19 68.5 0.0 4.8e-19 67.7 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_35621_length_605_cov_281.636842_g28559_i1reverse_frame_3 - 0.0016 18.2 0.1 0.002 17.8 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 NODE_35619_length_605_cov_320.938596_g28559_i0forward_frame_3 - 2.7e-19 68.5 0.0 4.8e-19 67.7 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_35619_length_605_cov_320.938596_g28559_i0forward_frame_3 - 0.0007 19.3 0.1 0.00094 18.9 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Paramyx_P_V_C PF03210.13 NODE_35615_length_605_cov_342.505263_g28556_i0reverse_frame_2 - 0.028 14.2 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal POTRA PF07244.15 NODE_35615_length_605_cov_342.505263_g28556_i0reverse_frame_2 - 0.087 13.4 0.0 1.1 9.9 0.1 2.3 1 1 0 2 2 2 0 Surface antigen variable number repeat AMPK1_CBM PF16561.5 NODE_35575_length_606_cov_146.054291_g26672_i1reverse_frame_3 - 0.1 12.8 0.1 0.42 10.8 0.0 1.9 2 0 0 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase FHA PF00498.26 NODE_35572_length_606_cov_169.008757_g28519_i0reverse_frame_2 - 0.11 12.9 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 FHA domain Ribosomal_S7e PF01251.18 ORF99381 - 1.1e-36 126.3 1.3 1.5e-36 125.9 1.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S7e WD40 PF00400.32 ORF97746 - 2.9e-16 59.6 10.0 0.00079 20.2 0.1 4.6 4 1 1 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF97746 - 1.4e-05 25.3 0.0 0.0013 18.9 0.0 3.0 2 2 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF97746 - 0.0076 16.2 0.1 0.16 11.9 0.0 2.3 2 1 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 ORF97746 - 0.033 13.1 0.0 0.52 9.2 0.0 2.4 2 1 1 3 3 3 0 WD40 region of Ge1, enhancer of mRNA-decapping protein PD40 PF07676.12 ORF97746 - 0.048 13.6 0.1 1.6 8.8 0.0 3.1 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat Frtz PF11768.8 ORF97746 - 0.05 11.9 0.0 0.061 11.6 0.0 1.1 1 0 0 1 1 1 0 WD repeat-containing and planar cell polarity effector protein Fritz VID27 PF08553.10 ORF97746 - 0.19 10.7 0.0 0.26 10.3 0.0 1.2 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain DNA_pol_A_exo1 PF01612.20 ORF96673 - 6e-16 58.7 0.0 8.9e-16 58.1 0.0 1.2 1 0 0 1 1 1 1 3'-5' exonuclease DUF1761 PF08570.10 ORF96637 - 0.099 12.9 3.5 0.21 11.8 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1761) DUF2070 PF09843.9 ORF96637 - 1.5 7.1 5.8 1.5 7.0 5.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2721 PF11026.8 ORF96637 - 4.4 7.2 8.8 1.1 9.1 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) Synaptobrevin PF00957.21 ORF96637 - 8.4 6.3 8.1 0.51 10.2 1.5 2.1 2 0 0 2 2 2 0 Synaptobrevin zf-AN1 PF01428.16 ORF95862 - 1.1e-17 63.8 39.9 2.2e-11 43.7 11.3 3.6 4 0 0 4 4 4 2 AN1-like Zinc finger Rad50_zn_hook PF04423.14 ORF95862 - 1.5e-05 24.7 2.6 0.11 12.3 0.1 3.6 3 0 0 3 3 3 2 Rad50 zinc hook motif zf-Di19 PF05605.12 ORF95862 - 0.00029 21.1 6.2 0.0038 17.5 1.0 4.4 4 1 0 4 4 4 2 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_4 PF13894.6 ORF95862 - 0.029 15.2 0.1 0.029 15.2 0.1 6.0 6 0 0 6 6 6 0 C2H2-type zinc finger GSP_synth PF03738.14 ORF95862 - 0.093 11.9 0.0 0.097 11.8 0.0 1.2 1 0 0 1 1 1 0 Glutathionylspermidine synthase preATP-grasp zf-C2H2 PF00096.26 ORF95862 - 0.13 12.8 0.0 0.13 12.8 0.0 5.7 6 1 0 6 6 6 0 Zinc finger, C2H2 type DUF393 PF04134.12 ORF95862 - 0.74 11.2 0.1 0.74 11.2 0.1 2.5 1 1 1 2 2 2 0 Protein of unknown function, DUF393 zf-C3HC4_3 PF13920.6 ORF95862 - 5.9 6.8 25.7 1.2 9.1 0.4 5.3 5 0 0 5 5 5 0 Zinc finger, C3HC4 type (RING finger) DYW_deaminase PF14432.6 ORF93177 - 5.4 6.9 10.6 8.3 6.3 4.3 2.4 1 1 0 2 2 2 0 DYW family of nucleic acid deaminases Dicer_dimer PF03368.14 ORF9227 - 0.047 13.8 0.2 0.095 12.9 0.0 1.6 2 0 0 2 2 2 0 Dicer dimerisation domain Pkinase PF00069.25 ORF92220 - 4.1e-59 200.1 1.9 4.5e-59 200.0 1.9 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92220 - 7.6e-35 120.4 0.2 8.4e-35 120.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF92220 - 3.6e-07 29.8 0.0 7.4e-07 28.8 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF92220 - 8.6e-06 25.2 0.2 1.9e-05 24.1 0.2 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF92220 - 7.1e-05 22.5 3.8 0.00027 20.6 3.8 1.6 1 1 0 1 1 1 1 RIO1 family dCache_2 PF08269.11 ORF92220 - 0.017 14.3 1.5 0.055 12.7 0.2 1.9 2 0 0 2 2 2 0 Cache domain Pkinase_fungal PF17667.1 ORF92220 - 0.027 13.3 0.2 0.18 10.5 0.0 1.8 1 1 1 2 2 2 0 Fungal protein kinase dCache_1 PF02743.18 ORF92220 - 0.048 13.4 0.0 0.071 12.9 0.0 1.3 1 0 0 1 1 1 0 Cache domain APH PF01636.23 ORF92220 - 0.068 13.1 0.0 0.37 10.7 0.0 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family Glycos_trans_3N PF02885.17 ORF92220 - 0.084 12.7 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain RmuC PF02646.16 ORF91614 - 0.016 14.3 0.1 0.025 13.7 0.1 1.2 1 0 0 1 1 1 0 RmuC family Pterin_4a PF01329.19 ORF88435 - 0.11 12.7 0.1 0.69 10.1 0.0 2.4 1 1 1 2 2 2 0 Pterin 4 alpha carbinolamine dehydratase ssDNA-exonuc_C PF10141.9 ORF88435 - 0.55 9.8 6.1 0.17 11.5 1.9 1.9 1 1 1 2 2 2 0 Single-strand DNA-specific exonuclease, C terminal domain DUF3919 PF13057.6 ORF88435 - 0.58 9.7 14.4 0.49 9.9 4.1 3.1 1 1 3 4 4 4 0 Protein of unknown function (DUF3919) FAM183 PF14886.6 ORF87143 - 9.5e-06 26.3 0.2 6e-05 23.7 0.1 2.0 2 0 0 2 2 2 1 FAM183A and FAM183B related IMUP PF15761.5 ORF87143 - 0.012 16.3 3.1 0.022 15.4 3.1 1.4 1 0 0 1 1 1 0 Immortalisation up-regulated protein DDE_3 PF13358.6 ORF86472 - 4.2e-18 65.5 1.2 5.2e-18 65.2 1.2 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF505 PF04458.12 ORF8520 - 0.088 11.2 0.1 0.11 10.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Lipase_3 PF01764.25 ORF81833 - 2.2e-06 27.6 0.1 7.4e-06 25.9 0.0 1.7 1 1 1 2 2 2 1 Lipase (class 3) Abhydrolase_3 PF07859.13 ORF81833 - 7.3e-05 22.7 0.0 8.8e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF81833 - 8.7e-05 22.7 0.0 0.00016 21.9 0.0 1.4 1 0 0 1 1 1 1 Thioesterase domain DUF2974 PF11187.8 ORF81833 - 0.00063 19.4 0.0 0.00084 19.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_5 PF12695.7 ORF81833 - 0.0011 18.7 0.0 0.0016 18.2 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.7 ORF81833 - 0.0076 16.9 0.1 0.018 15.7 0.1 1.6 1 1 1 2 2 2 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF81833 - 0.008 15.7 0.0 0.01 15.3 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family PGAP1 PF07819.13 ORF81833 - 0.015 15.0 0.0 0.02 14.6 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein Hydrolase_4 PF12146.8 ORF81833 - 0.022 14.0 0.0 0.035 13.4 0.0 1.3 1 1 0 1 1 1 0 Serine aminopeptidase, S33 Chlorophyllase2 PF12740.7 ORF81833 - 0.023 13.6 0.0 0.027 13.4 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme DLH PF01738.18 ORF81833 - 0.025 14.1 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 Dienelactone hydrolase family Chlorophyllase PF07224.11 ORF81833 - 0.08 11.9 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase NUMOD1 PF07453.13 ORF77438 - 0.085 13.1 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 NUMOD1 domain BBS2_N PF14781.6 ORF77438 - 0.09 12.7 0.7 0.16 11.8 0.7 1.4 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Vint PF14623.6 ORF77438 - 0.14 12.0 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Hint-domain EF-hand_8 PF13833.6 ORF75336 - 2.5e-11 43.2 0.3 1.7e-10 40.6 0.1 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF75336 - 5e-08 33.3 3.3 7.4e-05 23.1 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF75336 - 0.015 14.8 4.1 0.02 14.4 0.7 3.1 4 0 0 4 4 4 0 EF hand EF-hand_9 PF14658.6 ORF75336 - 0.043 14.2 0.2 2.3 8.6 0.1 2.5 2 1 0 2 2 2 0 EF-hand domain EF-hand_6 PF13405.6 ORF75336 - 0.073 13.0 0.8 41 4.5 0.0 3.6 3 0 0 3 3 3 0 EF-hand domain DUF87 PF01935.17 ORF75336 - 0.19 11.8 2.3 3.1 7.8 0.8 2.0 2 0 0 2 2 2 0 Helicase HerA, central domain UPF0515 PF15135.6 ORF75336 - 0.51 9.7 2.2 0.38 10.1 0.8 1.5 2 0 0 2 2 2 0 Uncharacterised protein UPF0515 COMM_domain PF07258.14 ORF74546 - 1.5e-08 34.6 0.0 2.7e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 COMM domain PDEase_I PF00233.19 ORF73877 - 1.4e-27 97.0 0.0 2e-27 96.5 0.0 1.3 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase GluR_Homer-bdg PF10606.9 ORF73877 - 0.02 15.1 0.0 0.036 14.2 0.0 1.4 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor Octopine_DH PF02317.17 ORF73864 - 0.084 13.0 0.1 0.17 12.0 0.1 1.5 1 0 0 1 1 1 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Meckelin PF09773.9 ORF70959 - 6.5e-09 34.5 0.0 5.4e-08 31.4 0.0 1.9 1 1 0 1 1 1 1 Meckelin (Transmembrane protein 67) RNA_pol_A_CTD PF03118.15 ORF65974 - 0.059 13.1 0.4 1.5 8.6 0.1 2.2 2 0 0 2 2 2 0 Bacterial RNA polymerase, alpha chain C terminal domain IBP39 PF11422.8 ORF64159 - 0.0021 17.9 0.5 1.5 8.5 0.0 2.1 2 0 0 2 2 2 2 Initiator binding protein 39 kDa Tetraspanin PF00335.20 ORF60938 - 0.0015 18.2 15.6 0.0034 17.1 15.5 1.5 1 1 0 1 1 1 1 Tetraspanin family RmuC PF02646.16 ORF58301 - 0.016 14.3 0.1 0.025 13.7 0.1 1.2 1 0 0 1 1 1 0 RmuC family Pro_isomerase PF00160.21 ORF55811 - 4.8e-05 23.7 0.0 8.5e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HSBP1 PF06825.12 ORF55470 - 0.11 12.3 3.1 9.2 6.2 0.1 2.7 2 0 0 2 2 2 0 Heat shock factor binding protein 1 Myb_DNA-bind_3 PF12776.7 ORF55470 - 2.4 9.2 6.4 7.3 7.7 0.3 2.9 1 1 3 4 4 4 0 Myb/SANT-like DNA-binding domain Pro_isomerase PF00160.21 ORF55329 - 2.8e-45 154.4 0.1 3.6e-45 154.1 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ETC_C1_NDUFA4 PF04800.12 ORF55287 - 8.2e-16 58.0 1.5 8.2e-16 58.0 1.5 1.8 1 1 1 2 2 2 1 ETC complex I subunit conserved region Luciferase_N PF05295.11 ORF55287 - 0.041 13.9 0.3 0.13 12.3 0.1 1.9 1 1 1 2 2 2 0 Luciferase/LBP N-terminal domain LRR_4 PF12799.7 ORF51046 - 3.5e-21 74.9 27.5 4.2e-08 33.3 4.1 3.8 2 1 2 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF51046 - 2.3e-14 52.9 17.1 4.2e-07 29.6 2.3 3.5 3 1 0 3 3 3 3 Leucine rich repeat LRR_9 PF14580.6 ORF51046 - 2e-07 30.7 4.2 6.7e-05 22.5 0.9 2.1 1 1 1 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 ORF51046 - 6.2e-06 25.8 11.2 0.67 10.2 0.1 4.7 4 0 0 4 4 4 3 Leucine Rich repeat LRR_1 PF00560.33 ORF51046 - 0.00081 19.6 14.9 3.8 8.4 0.1 5.5 4 1 0 4 4 4 2 Leucine Rich Repeat Glycoprotein_B PF00606.18 ORF51046 - 0.0028 17.2 2.2 0.0034 16.8 0.9 1.7 1 1 1 2 2 2 1 Herpesvirus Glycoprotein B ectodomain LRR_3 PF07725.12 ORF51046 - 2.6 8.1 5.3 12 6.0 0.1 3.9 3 1 1 4 4 4 0 Leucine Rich Repeat BRCA-2_OB3 PF09104.10 ORF49346 - 0.018 14.7 1.0 0.036 13.7 1.0 1.5 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 DrrA_P4M PF14860.6 ORF4905 - 0.014 15.2 0.3 0.014 15.2 0.3 2.2 3 0 0 3 3 3 0 DrrA phosphatidylinositol 4-phosphate binding domain ODAPH PF15848.5 ORF4905 - 0.083 13.3 0.7 0.13 12.7 0.7 1.4 1 0 0 1 1 1 0 Odontogenesis associated phosphoprotein CAAX_1 PF15895.5 ORF48264 - 0.00035 20.6 3.9 0.00035 20.6 3.9 1.4 1 1 0 1 1 1 1 CAAX box cerebral protein 1 zf-RING_2 PF13639.6 ORF48080 - 3.8e-07 30.3 9.5 6e-07 29.7 9.5 1.3 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 ORF48080 - 9.6e-06 25.6 6.8 1.8e-05 24.7 6.8 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF48080 - 9.7e-06 25.7 7.6 2.3e-05 24.5 7.6 1.6 1 1 0 1 1 1 1 FANCL C-terminal domain zf-rbx1 PF12678.7 ORF48080 - 1.7e-05 25.0 11.5 4.7e-05 23.6 11.5 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING-like PF08746.11 ORF48080 - 0.0039 17.5 10.8 0.0094 16.2 10.8 1.7 1 1 0 1 1 1 1 RING-like domain RINGv PF12906.7 ORF48080 - 0.0089 16.1 8.6 0.018 15.2 8.6 1.6 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4 PF00097.25 ORF48080 - 0.016 15.1 11.2 0.032 14.1 11.2 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF48080 - 0.04 13.5 9.3 0.094 12.3 9.3 1.6 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF48080 - 0.052 13.4 10.2 0.096 12.6 10.2 1.4 1 0 0 1 1 1 0 PHD-finger C1_1 PF00130.22 ORF48080 - 0.14 12.1 13.6 0.062 13.2 6.5 2.6 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2318 PF10080.9 ORF48080 - 0.14 12.3 4.4 0.16 12.1 2.3 2.1 2 1 0 2 2 2 0 Predicted membrane protein (DUF2318) zf-C3HC4_2 PF13923.6 ORF48080 - 0.16 11.9 13.4 0.53 10.2 13.4 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_9 PF13901.6 ORF48080 - 1 9.3 11.9 3.9 7.4 11.6 2.0 1 1 1 2 2 2 0 Putative zinc-RING and/or ribbon Zn-ribbon_8 PF09723.10 ORF48080 - 1.1 9.4 4.5 3 8.1 4.5 1.7 1 0 0 1 1 1 0 Zinc ribbon domain DUF4519 PF15012.6 ORF47300 - 0.16 12.2 3.6 0.39 10.9 3.6 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) DUF1189 PF06691.11 ORF45795 - 0.12 11.9 3.5 0.093 12.3 2.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1189) DUF4734 PF15881.5 ORF44866 - 0.084 13.0 0.8 0.19 11.9 0.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4734) DUF1761 PF08570.10 ORF42388 - 0.098 12.9 3.5 0.21 11.8 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1761) DUF2070 PF09843.9 ORF42388 - 0.54 8.5 4.4 0.57 8.4 4.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2721 PF11026.8 ORF42388 - 4.5 7.2 8.8 1.1 9.1 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) Synaptobrevin PF00957.21 ORF42388 - 8.4 6.3 8.1 0.51 10.2 1.5 2.1 2 0 0 2 2 2 0 Synaptobrevin DUF417 PF04224.12 ORF39180 - 2e-80 268.4 0.1 2.3e-80 268.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF417 TMEM72 PF16054.5 ORF39180 - 0.037 13.7 0.1 0.07 12.8 0.1 1.4 1 0 0 1 1 1 0 Transmembrane protein family 72 DoxX PF07681.12 ORF39180 - 0.044 14.4 7.0 0.046 14.3 1.8 2.6 1 1 1 2 2 2 0 DoxX EF-hand_6 PF13405.6 ORF39126 - 0.00068 19.4 0.2 0.0023 17.7 0.1 1.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF39126 - 0.0031 16.9 0.1 0.0076 15.7 0.1 1.7 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF39126 - 0.022 14.3 0.1 0.08 12.5 0.1 2.0 1 0 0 1 1 1 0 EF hand EF-hand_7 PF13499.6 ORF39126 - 0.2 12.1 0.3 0.43 11.1 0.3 1.8 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_8 PF13833.6 ORF39126 - 0.39 10.6 0.1 0.39 10.6 0.1 1.7 2 0 0 2 2 2 0 EF-hand domain pair Hydrolase_4 PF12146.8 ORF35873 - 0.00062 19.1 0.0 0.00088 18.6 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF35873 - 0.019 14.4 0.1 0.038 13.5 0.0 1.6 1 1 1 2 2 2 0 Prolyl oligopeptidase family Abhydrolase_4 PF08386.10 ORF35873 - 0.021 14.9 0.0 0.037 14.1 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein DLH PF01738.18 ORF35873 - 0.059 12.9 0.1 0.11 12.0 0.1 1.5 1 1 0 1 1 1 0 Dienelactone hydrolase family LMBR1 PF04791.16 ORF35806 - 6.7e-08 31.9 4.6 9.1e-08 31.5 4.6 1.2 1 0 0 1 1 1 1 LMBR1-like membrane protein DUF1518 PF07469.12 ORF35669 - 9.7 6.7 8.0 0.63 10.5 1.5 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF1518) SDH_C PF18317.1 ORF31933 - 0.082 12.7 0.1 6.2 6.7 0.0 2.3 2 0 0 2 2 2 0 Shikimate 5'-dehydrogenase C-terminal domain Toprim_4 PF13662.6 ORF27772 - 6.1e-25 87.5 0.0 9.5e-25 86.9 0.0 1.3 1 0 0 1 1 1 1 Toprim domain RecR PF02132.15 ORF27772 - 1.1e-15 56.9 1.2 2.3e-15 55.9 1.2 1.6 1 0 0 1 1 1 1 RecR protein Toprim PF01751.22 ORF27772 - 1.3e-11 44.6 0.0 2.2e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 Toprim domain FYVE_2 PF02318.16 ORF27772 - 0.045 14.0 0.4 0.23 11.7 0.2 2.0 2 0 0 2 2 2 0 FYVE-type zinc finger HHH PF00633.23 ORF27772 - 0.076 12.9 0.9 0.31 11.0 0.0 2.4 3 0 0 3 3 3 0 Helix-hairpin-helix motif HHH_5 PF14520.6 ORF27772 - 0.13 12.9 0.0 0.67 10.6 0.0 2.1 2 0 0 2 2 2 0 Helix-hairpin-helix domain Toprim_2 PF13155.6 ORF27772 - 0.16 12.5 0.0 0.82 10.1 0.0 1.9 2 0 0 2 2 2 0 Toprim-like TMEM135_C_rich PF15982.5 ORF22983 - 5.5e-05 23.8 2.3 6e-05 23.7 1.3 1.5 1 1 1 2 2 2 1 N-terminal cysteine-rich region of Transmembrane protein 135 Tim17 PF02466.19 ORF22983 - 0.0017 18.7 0.0 0.0028 18.0 0.0 1.4 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family DUF2418 PF10332.9 ORF22983 - 5 7.7 7.0 2.6 8.6 0.1 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF2418) RdRP PF05183.12 ORF21828 - 5.8e-38 130.9 0.1 6.5e-38 130.7 0.1 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase DUF4550 PF15084.6 ORF21828 - 1.4 9.4 4.4 5.5 7.5 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4550) TFIIF_alpha PF05793.12 ORF2067 - 2.4 6.6 6.0 2.9 6.4 6.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) TRP PF06011.12 ORF19765 - 0.00037 19.4 2.5 0.00053 18.8 2.5 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF1247 PF06851.11 ORF19765 - 0.033 14.1 0.1 0.051 13.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) WBP-1 PF11669.8 ORF19765 - 0.07 13.8 0.2 0.14 12.8 0.2 1.6 1 0 0 1 1 1 0 WW domain-binding protein 1 DUF3099 PF11298.8 ORF19765 - 0.21 11.7 1.9 0.42 10.8 1.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) DUF1980 PF09323.10 ORF19765 - 0.24 11.3 3.0 0.32 10.9 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) His_Phos_1 PF00300.22 ORF1970 - 5.6e-08 32.7 0.0 2.7e-05 24.0 0.0 2.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) FAD_binding_9 PF08021.11 ORF18863 - 0.097 12.9 0.1 0.17 12.1 0.1 1.4 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain bZIP_1 PF00170.21 ORF18863 - 0.23 11.6 8.0 0.14 12.3 3.2 2.6 1 1 1 2 2 2 0 bZIP transcription factor YqzH PF14164.6 ORF18863 - 0.75 9.9 8.4 0.27 11.3 0.7 2.9 2 1 1 3 3 3 0 YqzH-like protein TMEM135_C_rich PF15982.5 ORF18722 - 5.5e-05 23.8 2.3 6e-05 23.7 1.3 1.5 1 1 1 2 2 2 1 N-terminal cysteine-rich region of Transmembrane protein 135 Tim17 PF02466.19 ORF18722 - 0.0017 18.7 0.0 0.0028 18.0 0.0 1.4 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family DUF2418 PF10332.9 ORF18722 - 5 7.7 7.0 2.6 8.6 0.1 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF2418) Snf7 PF03357.21 ORF16689 - 2.5e-16 59.7 10.9 3.1e-16 59.4 10.9 1.1 1 0 0 1 1 1 1 Snf7 Phage_TAC_12 PF12363.8 ORF16689 - 0.025 15.0 1.1 1.4 9.3 0.3 2.5 2 0 0 2 2 2 0 Phage tail assembly chaperone protein, TAC Prefoldin_2 PF01920.20 ORF16689 - 0.073 13.0 8.3 0.049 13.6 1.0 2.3 2 0 0 2 2 2 0 Prefoldin subunit BLOC1_2 PF10046.9 ORF16689 - 0.14 12.5 4.8 4.9 7.5 0.4 3.1 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 bZIP_1 PF00170.21 ORF16689 - 9.4 6.4 8.9 5.4 7.2 0.2 3.4 4 0 0 4 4 4 0 bZIP transcription factor Phage_TAC_12 PF12363.8 ORF151299 - 0.016 15.6 0.5 0.033 14.6 0.5 1.6 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Dynamin_M PF01031.20 ORF151299 - 0.022 14.0 0.1 0.03 13.5 0.1 1.2 1 0 0 1 1 1 0 Dynamin central region Flexi_CP_N PF08358.10 ORF151299 - 0.042 13.8 0.0 0.079 13.0 0.0 1.4 1 0 0 1 1 1 0 Carlavirus coat WD40_alt PF14077.6 ORF146267 - 0.052 13.4 0.1 0.14 12.0 0.1 1.7 1 0 0 1 1 1 0 Alternative WD40 repeat motif HTH_WhiA PF02650.14 ORF146267 - 0.14 12.5 6.9 0.11 12.9 2.4 2.7 2 1 0 2 2 2 0 WhiA C-terminal HTH domain DUF1761 PF08570.10 ORF145772 - 0.099 12.9 3.5 0.21 11.8 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1761) DUF2070 PF09843.9 ORF145772 - 1.5 7.1 5.8 1.5 7.0 5.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2721 PF11026.8 ORF145772 - 4.4 7.2 8.8 1.1 9.1 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) Synaptobrevin PF00957.21 ORF145772 - 8.4 6.3 8.1 0.51 10.2 1.5 2.1 2 0 0 2 2 2 0 Synaptobrevin GRP PF07172.11 ORF14460 - 1.2 9.9 34.4 2 9.2 34.4 1.4 1 0 0 1 1 1 0 Glycine rich protein family VIT1 PF01988.19 ORF142377 - 2 8.2 2.7 2.3 8.0 2.7 1.3 1 0 0 1 1 1 0 VIT family RRM_1 PF00076.22 ORF140760 - 1e-06 28.5 0.1 2.3e-06 27.3 0.0 1.7 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF140760 - 0.033 13.8 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-RING_2 PF13639.6 ORF139764 - 3.4e-11 43.3 6.8 3.4e-11 43.3 6.8 2.5 2 0 0 2 2 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF139764 - 9.6e-07 28.4 7.0 9.6e-07 28.4 7.0 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF139764 - 5.7e-06 26.1 6.6 5.7e-06 26.1 6.6 2.7 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF139764 - 1e-05 25.4 3.8 1e-05 25.4 3.8 2.5 3 0 0 3 3 2 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF139764 - 4e-05 23.8 7.2 4e-05 23.8 7.2 2.8 3 1 0 3 3 3 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF139764 - 5.2e-05 23.1 6.6 5.2e-05 23.1 6.6 2.7 3 0 0 3 3 2 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF139764 - 0.00093 19.0 8.1 0.00093 19.0 8.1 2.1 2 0 0 2 2 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF139764 - 0.00099 18.7 6.8 0.00099 18.7 6.8 2.5 3 0 0 3 3 2 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF139764 - 0.0027 17.7 4.2 0.011 15.7 4.2 2.0 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 ORF139764 - 0.0032 17.3 6.3 0.0032 17.3 6.3 2.2 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) CD34_antigen PF06365.12 ORF139764 - 0.062 12.9 0.0 0.083 12.5 0.0 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family SUR7 PF06687.12 ORF139764 - 8.1 6.0 9.5 0.14 11.8 0.6 2.0 2 0 0 2 2 2 0 SUR7/PalI family Snf7 PF03357.21 ORF136775 - 3.2e-24 85.4 10.4 3.9e-24 85.2 10.4 1.0 1 0 0 1 1 1 1 Snf7 Ist1 PF03398.14 ORF136775 - 0.047 13.6 2.2 0.056 13.4 2.2 1.2 1 0 0 1 1 1 0 Regulator of Vps4 activity in the MVB pathway IMD PF08397.11 ORF136775 - 0.21 10.9 4.9 0.11 11.9 2.1 1.7 1 1 0 1 1 1 0 IRSp53/MIM homology domain Laminin_II PF06009.12 ORF136775 - 1.2 9.2 8.0 1.1 9.2 1.7 2.2 1 1 1 2 2 2 0 Laminin Domain II YlqD PF11068.8 ORF136775 - 2.7 8.4 9.2 5.1 7.5 1.9 2.1 1 1 1 2 2 2 0 YlqD protein Snf7 PF03357.21 ORF135578 - 3.6e-18 65.7 12.3 4.3e-18 65.5 12.3 1.0 1 0 0 1 1 1 1 Snf7 Phage_TAC_12 PF12363.8 ORF135578 - 0.0098 16.3 1.2 1 9.8 0.5 2.4 2 1 0 2 2 2 1 Phage tail assembly chaperone protein, TAC DUF357 PF04010.13 ORF135578 - 0.24 11.5 0.9 0.65 10.1 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF357) Prefoldin_2 PF01920.20 ORF135578 - 0.27 11.2 8.9 0.15 12.0 1.0 2.3 2 0 0 2 2 2 0 Prefoldin subunit LMBR1 PF04791.16 ORF135578 - 0.27 10.1 3.9 0.36 9.7 3.9 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Laminin_II PF06009.12 ORF135578 - 0.39 10.7 8.4 2.8 8.0 4.6 2.5 1 1 1 2 2 2 0 Laminin Domain II VIT1 PF01988.19 ORF135375 - 2 8.2 2.7 2.3 8.0 2.7 1.3 1 0 0 1 1 1 0 VIT family Thioredoxin PF00085.20 ORF135230 - 8.2e-08 32.2 0.0 1.1e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Phage_HK97_TLTM PF06120.11 ORF13330 - 0.0048 16.1 2.2 0.0061 15.8 2.2 1.1 1 0 0 1 1 1 1 Tail length tape measure protein Hydrolase_4 PF12146.8 ORF131383 - 2.2e-25 89.3 0.0 2.7e-25 89.1 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF131383 - 1.1e-16 61.3 0.0 1.2e-16 61.1 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF588 PF04535.12 ORF127171 - 0.1 12.4 2.2 0.17 11.7 2.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF588) Ribosomal_S7e PF01251.18 ORF125097 - 1.1e-36 126.3 1.3 1.5e-36 125.9 1.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S7e DUF1761 PF08570.10 ORF125089 - 0.099 12.9 3.5 0.21 11.8 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1761) DUF2070 PF09843.9 ORF125089 - 1.5 7.1 5.8 1.5 7.0 5.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2721 PF11026.8 ORF125089 - 4.4 7.2 8.8 1.1 9.1 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) Synaptobrevin PF00957.21 ORF125089 - 8.4 6.3 8.1 0.51 10.2 1.5 2.1 2 0 0 2 2 2 0 Synaptobrevin PAN_4 PF14295.6 ORF124982 - 0.00024 20.9 0.2 0.00045 20.1 0.2 1.5 1 0 0 1 1 1 1 PAN domain PAN_1 PF00024.26 ORF124982 - 0.005 16.8 0.1 0.0089 16.0 0.1 1.4 1 0 0 1 1 1 1 PAN domain TFIIF_alpha PF05793.12 ORF124380 - 2.4 6.6 6.0 2.9 6.4 6.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) GSHPx PF00255.19 ORF12435 - 3.9e-08 32.8 0.1 7.6e-08 31.9 0.1 1.5 1 0 0 1 1 1 1 Glutathione peroxidase ATR13 PF16829.5 ORF12258 - 0.041 14.2 0.0 0.068 13.5 0.0 1.4 1 0 0 1 1 1 0 Avirulence protein ATR13, RxLR effector # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks116.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks116.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks116.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks116.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:00:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- cNMP_binding PF00027.29 ORF119607 - 1.7e-36 124.1 0.5 6.2e-19 67.9 0.1 2.1 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Hepsin-SRCR PF09272.10 ORF118181 - 0.011 16.2 0.0 0.02 15.4 0.0 1.3 1 0 0 1 1 1 0 Hepsin, SRCR domain 2OG-FeII_Oxy_5 PF13759.6 ORF115311 - 0.037 14.4 0.0 0.057 13.8 0.0 1.3 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase Wzy_C PF04932.15 ORF115116 - 0.005 16.5 2.4 0.039 13.6 2.4 2.1 1 1 0 1 1 1 1 O-Antigen ligase Pex24p PF06398.11 ORF115116 - 0.017 14.1 0.1 0.023 13.7 0.1 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Halogen_Hydrol PF10112.9 ORF115116 - 0.067 13.2 1.9 1.5 8.8 2.0 2.3 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein TLP-20 PF06088.11 ORF115116 - 0.12 12.3 0.2 0.12 12.3 0.2 1.6 2 0 0 2 2 2 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) Mem_trans PF03547.18 ORF115116 - 0.28 9.5 3.9 0.57 8.5 3.9 1.6 1 1 0 1 1 1 0 Membrane transport protein DUF2070 PF09843.9 ORF115116 - 0.35 9.1 14.3 0.46 8.7 14.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2140 PF09911.9 ORF115116 - 0.79 9.2 0.0 0.79 9.2 0.0 2.5 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) SID-1_RNA_chan PF13965.6 ORF115116 - 5.5 5.3 8.6 0.64 8.4 0.0 2.1 1 1 1 2 2 2 0 dsRNA-gated channel SID-1 Prominin PF05478.11 ORF115116 - 6.5 4.6 5.1 2.2 6.1 2.7 1.4 1 1 0 1 1 1 0 Prominin Pox_A3L PF05288.11 ORF114057 - 0.35 10.9 4.4 0.2 11.7 0.4 2.5 2 1 0 2 2 2 0 Poxvirus A3L Protein SLIDE PF09111.10 ORF113527 - 0.038 14.0 0.6 0.055 13.5 0.6 1.2 1 0 0 1 1 1 0 SLIDE Ham1p_like PF01725.16 ORF112867 - 0.012 15.6 0.7 0.019 14.9 0.7 1.4 1 0 0 1 1 1 0 Ham1 family GATase_2 PF00310.21 ORF112867 - 0.027 13.2 0.1 0.034 12.9 0.1 1.1 1 0 0 1 1 1 0 Glutamine amidotransferases class-II FAD_binding_9 PF08021.11 ORF112867 - 0.034 14.4 0.1 0.059 13.6 0.1 1.4 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain Takusan PF04822.13 ORF112867 - 3.9 7.4 10.5 0.64 9.9 3.7 2.4 1 1 1 2 2 2 0 Takusan PDEase_I PF00233.19 ORF108648 - 1.4e-27 97.0 0.0 2e-27 96.5 0.0 1.3 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase GluR_Homer-bdg PF10606.9 ORF108648 - 0.02 15.1 0.0 0.036 14.2 0.0 1.4 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor rve PF00665.26 ORF106781 - 1.2e-30 106.1 0.0 1.7e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF106781 - 1.4e-20 73.1 1.1 3.5e-20 71.9 1.1 1.7 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF106781 - 3.6e-13 49.1 0.0 8e-13 48.0 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 ORF106781 - 6.9e-09 36.1 0.1 9.5e-09 35.6 0.1 1.1 1 0 0 1 1 1 1 DDE domain DUF480 PF04337.12 ORF106781 - 0.15 12.1 0.1 0.38 10.9 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function, DUF480 DUF3924 PF13062.6 ORF106373 - 0.07 13.1 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3924) DUF1847 PF08901.11 ORF106373 - 0.12 12.1 0.1 0.19 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1847) 7TMR-DISMED2 PF07696.11 ORF105273 - 0.17 11.9 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 7TMR-DISM extracellular 2 cNMPbd_u2 PF16643.5 ORF104852 - 0.11 12.9 5.2 0.18 12.3 5.2 1.4 1 0 0 1 1 1 0 Unstructured region on cNMP-binding protein Plug PF07715.15 NODE_35980_length_598_cov_4.216696_g28882_i0reverse_frame_1 - 2.1e-05 25.1 0.0 3.7e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain GDC-P PF02347.16 NODE_35950_length_598_cov_767.721137_g10786_i1reverse_frame_1 - 0.042 12.7 0.0 0.057 12.2 0.0 1.0 1 0 0 1 1 1 0 Glycine cleavage system P-protein Gag_p10 PF02337.17 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_1 - 0.023 14.6 0.6 0.073 13.0 0.1 2.1 2 0 0 2 2 2 0 Retroviral GAG p10 protein BSP_II PF05432.11 NODE_35941_length_599_cov_2.856383_g28846_i0forward_frame_1 - 0.23 11.1 7.5 0.3 10.7 7.5 1.1 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) DUF2812 PF11193.8 NODE_35936_length_599_cov_55.551418_g28841_i0reverse_frame_1 - 0.028 14.6 0.9 0.041 14.1 0.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2812) CRT-like PF08627.10 NODE_35918_length_599_cov_129.281915_g28824_i0forward_frame_1 - 2.6e-08 33.2 1.0 6.5e-06 25.3 0.5 2.0 1 1 1 2 2 2 2 CRT-like, chloroquine-resistance transporter-like PTS-HPr PF00381.19 NODE_35917_length_599_cov_131.602837_g28823_i0forward_frame_1 - 0.21 11.9 0.2 0.36 11.1 0.2 1.3 1 0 0 1 1 1 0 PTS HPr component phosphorylation site PolC_DP2 PF03833.13 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_3 - 2.2 6.0 5.4 2.3 6.0 5.4 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 FTA4 PF13093.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.00015 21.7 1.6 0.00021 21.3 1.6 1.3 1 0 0 1 1 1 1 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 Filament PF00038.21 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0008 19.1 2.9 0.0013 18.4 2.9 1.4 1 0 0 1 1 1 1 Intermediate filament protein DUF2362 PF10154.9 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.00081 18.5 0.4 0.00095 18.2 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2362) TPR_MLP1_2 PF07926.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0026 17.8 6.3 0.0053 16.8 6.3 1.5 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein DUF641 PF04859.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0062 16.9 3.4 0.014 15.8 3.4 1.5 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) Tektin PF03148.14 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0077 15.0 2.8 0.0077 15.0 2.8 1.6 2 0 0 2 2 2 1 Tektin family DUF4407 PF14362.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.0081 15.5 3.7 0.0082 15.5 3.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Mod_r PF07200.13 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.011 15.9 4.0 0.011 15.9 4.0 2.0 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein GyrB_insert PF18053.1 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.019 14.8 4.4 0.055 13.4 3.9 1.8 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain SKA2 PF16740.5 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.022 14.5 5.8 0.03 14.1 4.5 1.9 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 Exonuc_VII_L PF02601.15 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.023 14.3 1.6 0.024 14.2 1.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_3 PF13758.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.025 14.6 1.1 8.8 6.5 0.6 2.5 1 1 1 2 2 2 0 Prefoldin subunit DUF632 PF04782.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.039 13.3 4.6 0.069 12.5 4.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF632) PKcGMP_CC PF16808.5 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.048 13.5 0.4 0.14 12.0 0.4 1.8 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase UPF0242 PF06785.11 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.052 13.7 4.5 0.077 13.1 4.5 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Tho2 PF11262.8 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.054 12.7 0.9 0.078 12.2 0.9 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Spectrin PF00435.21 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.077 13.5 5.5 0.52 10.8 5.2 2.4 1 1 1 2 2 2 0 Spectrin repeat DUF4795 PF16043.5 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.078 12.6 8.0 0.15 11.7 7.8 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) RasGAP_C PF03836.15 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.099 12.8 5.0 0.12 12.5 3.9 1.7 1 1 0 1 1 1 0 RasGAP C-terminus TMPIT PF07851.13 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.11 11.7 1.2 0.15 11.3 1.2 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF4763 PF15960.5 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.11 11.8 8.1 0.18 11.1 8.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) GAS PF13851.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.15 11.4 9.1 0.098 12.0 6.8 1.9 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Apo-CIII PF05778.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.17 11.5 2.4 1.6 8.5 1.5 2.2 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) Syntaxin-6_N PF09177.11 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.23 12.1 4.2 0.32 11.6 2.6 2.0 2 0 0 2 2 2 0 Syntaxin 6, N-terminal FUSC PF04632.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.23 10.0 2.1 0.25 9.8 1.7 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein family YabA PF06156.13 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.37 11.5 6.5 0.9 10.2 4.0 2.3 1 1 2 3 3 3 0 Initiation control protein YabA Fib_alpha PF08702.10 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.48 10.6 7.3 0.99 9.6 7.3 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family OmpH PF03938.14 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.52 10.7 11.7 0.98 9.8 11.7 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) NPV_P10 PF05531.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.53 10.8 6.9 1.9 9.0 5.7 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein LUC7 PF03194.15 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.54 9.9 7.2 0.28 10.8 4.0 1.9 2 1 0 2 2 2 0 LUC7 N_terminus HAUS6_N PF14661.6 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 0.8 9.2 7.9 1.2 8.7 7.8 1.5 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Seryl_tRNA_N PF02403.22 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 1 9.6 10.0 0.14 12.4 5.2 2.0 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Med9 PF07544.13 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 1.8 8.7 8.3 0.52 10.4 4.3 2.1 3 0 0 3 3 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF948 PF06103.11 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 2 8.7 5.0 4.5 7.6 0.9 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) ZapB PF06005.12 NODE_35836_length_601_cov_2.818021_g28753_i0forward_frame_2 - 5.4 7.5 12.4 0.6 10.6 6.8 2.3 3 0 0 3 3 2 0 Cell division protein ZapB DnaJ PF00226.31 NODE_35828_length_601_cov_74.180212_g28745_i0forward_frame_2 - 5e-18 65.0 3.0 5e-18 65.0 3.0 1.8 2 0 0 2 2 2 1 DnaJ domain AMMECR1 PF01871.17 NODE_35818_length_601_cov_120.537102_g28735_i0reverse_frame_3 - 1.6e-45 154.7 0.0 1.9e-45 154.5 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 Flp_C PF05202.12 NODE_35818_length_601_cov_120.537102_g28735_i0reverse_frame_2 - 0.1 12.1 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Recombinase Flp protein Abhydrolase_6 PF12697.7 NODE_35815_length_601_cov_141.114841_g28732_i0reverse_frame_2 - 0.0037 17.9 1.4 0.0051 17.4 1.4 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Gal-bind_lectin PF00337.22 NODE_35811_length_601_cov_189.270318_g28728_i0forward_frame_3 - 0.00085 18.9 0.0 0.0011 18.5 0.0 1.1 1 0 0 1 1 1 1 Galactoside-binding lectin zf-B_box PF00643.24 NODE_35811_length_601_cov_189.270318_g28728_i0forward_frame_3 - 0.01 16.0 8.5 0.023 14.9 8.5 1.6 1 0 0 1 1 1 1 B-box zinc finger ZZ PF00569.17 NODE_35811_length_601_cov_189.270318_g28728_i0forward_frame_3 - 0.017 14.9 10.3 0.033 14.0 10.3 1.4 1 0 0 1 1 1 0 Zinc finger, ZZ type VWA_N2 PF16164.5 NODE_35811_length_601_cov_189.270318_g28728_i0forward_frame_3 - 0.17 12.0 6.6 8.8 6.6 6.4 2.4 1 1 0 1 1 1 0 VWA N-terminal C1_2 PF03107.16 NODE_35811_length_601_cov_189.270318_g28728_i0forward_frame_3 - 0.2 12.0 12.5 0.38 11.1 12.5 1.5 1 0 0 1 1 1 0 C1 domain SWIRM PF04433.17 NODE_35802_length_601_cov_504.720848_g28719_i0reverse_frame_3 - 0.085 13.2 0.7 0.18 12.2 0.7 1.5 1 0 0 1 1 1 0 SWIRM domain TMEM239 PF15841.5 NODE_35798_length_601_cov_779.871025_g26255_i1forward_frame_3 - 1.6 8.6 5.8 2.7 7.9 5.8 1.3 1 0 0 1 1 1 0 Transmembrane protein 239 family EamA PF00892.20 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 1.4e-12 47.9 19.4 2.5e-10 40.7 3.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family Nuc_sug_transp PF04142.15 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 0.0068 15.6 1.3 0.012 14.8 1.3 1.3 1 0 0 1 1 1 1 Nucleotide-sugar transporter FixS PF03597.15 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 0.014 15.1 1.1 0.014 15.1 1.1 4.3 6 0 0 6 6 6 0 Cytochrome oxidase maturation protein cbb3-type DUF2070 PF09843.9 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 0.078 11.3 14.5 0.024 13.0 6.0 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) RseC_MucC PF04246.12 NODE_35786_length_602_cov_2.779541_g28709_i0reverse_frame_2 - 6.4 6.7 11.3 1 9.3 2.1 2.8 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF4735 PF15882.5 NODE_35782_length_602_cov_5.037037_g28705_i0reverse_frame_2 - 0.18 11.2 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4735) ApoLp-III PF07464.11 NODE_35768_length_602_cov_147.837743_g28693_i0reverse_frame_2 - 0.012 15.7 9.9 0.012 15.7 9.9 1.6 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Pesticin PF16754.5 NODE_35757_length_602_cov_230.680776_g28682_i0forward_frame_2 - 0.089 12.8 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial toxin homologue of phage lysozyme, C-term DUF5450 PF17529.2 NODE_35757_length_602_cov_230.680776_g28682_i0forward_frame_2 - 0.14 12.3 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5450) RRM_1 PF00076.22 NODE_35754_length_602_cov_274.536155_g28679_i0forward_frame_2 - 5.3e-10 39.0 0.0 8.2e-10 38.4 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF3617 PF12276.8 NODE_35754_length_602_cov_274.536155_g28679_i0forward_frame_2 - 0.012 15.9 1.0 0.019 15.3 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3617) RRM_7 PF16367.5 NODE_35754_length_602_cov_274.536155_g28679_i0forward_frame_2 - 0.076 13.1 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif Pkinase PF00069.25 NODE_35727_length_603_cov_100.563380_g6317_i1forward_frame_2 - 2.2e-19 69.9 0.2 3e-19 69.4 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_35727_length_603_cov_100.563380_g6317_i1forward_frame_2 - 2.2e-07 30.4 0.6 5.9e-06 25.8 0.6 2.0 1 1 0 1 1 1 1 Protein tyrosine kinase VHL_C PF17211.3 NODE_35727_length_603_cov_100.563380_g6317_i1forward_frame_2 - 0.091 12.8 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 VHL box domain BRCA2 PF00634.18 NODE_35720_length_603_cov_132.220070_g28647_i0forward_frame_2 - 0.0067 16.1 0.4 0.0067 16.1 0.4 1.9 2 0 0 2 2 2 1 BRCA2 repeat RRM_1 PF00076.22 NODE_35713_length_603_cov_206.408451_g28641_i0reverse_frame_3 - 1.6e-20 72.7 0.1 2.3e-20 72.2 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_35713_length_603_cov_206.408451_g28641_i0reverse_frame_3 - 0.017 15.2 0.0 0.025 14.7 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif DUF4944 PF16302.5 NODE_35713_length_603_cov_206.408451_g28641_i0reverse_frame_3 - 0.042 13.9 0.0 0.065 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4944) RRM_5 PF13893.6 NODE_35713_length_603_cov_206.408451_g28641_i0reverse_frame_3 - 0.073 12.7 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 NODE_35713_length_603_cov_206.408451_g28641_i0reverse_frame_3 - 0.083 12.9 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 RNA binding motif Atg8 PF02991.16 NODE_35696_length_603_cov_2100.265845_g28629_i0forward_frame_3 - 1.3e-36 124.9 0.4 1.8e-36 124.5 0.4 1.2 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 NODE_35696_length_603_cov_2100.265845_g28629_i0forward_frame_3 - 0.00014 22.2 0.1 0.00029 21.2 0.1 1.5 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Abhydrolase_5 PF12695.7 NODE_35696_length_603_cov_2100.265845_g28629_i0forward_frame_3 - 0.11 12.3 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Hormone_5 PF00184.17 NODE_35696_length_603_cov_2100.265845_g28629_i0forward_frame_2 - 1.2 10.0 16.2 1.1 10.2 4.2 2.3 2 0 0 2 2 2 0 Neurohypophysial hormones, C-terminal Domain Gate PF07670.14 NODE_35695_length_603_cov_3058.327465_g28628_i0reverse_frame_3 - 0.68 10.2 3.8 0.38 11.0 1.3 1.7 2 0 0 2 2 2 0 Nucleoside recognition SID-1_RNA_chan PF13965.6 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 0.0015 17.0 3.4 0.0019 16.7 3.4 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 FlxA PF14282.6 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 0.015 15.3 5.4 0.026 14.5 5.4 1.3 1 0 0 1 1 1 0 FlxA-like protein AI-2E_transport PF01594.16 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 0.016 14.4 0.7 0.032 13.4 0.0 1.7 2 0 0 2 2 2 0 AI-2E family transporter DUF4349 PF14257.6 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 0.021 14.3 0.3 0.021 14.3 0.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) TolA_bind_tri PF16331.5 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 0.023 14.8 8.8 0.56 10.3 0.2 2.4 1 1 1 2 2 2 0 TolA binding protein trimerisation FapA PF03961.13 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 0.035 12.7 2.3 0.044 12.4 2.3 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF2797 PF10977.8 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 0.28 11.0 2.3 0.39 10.6 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) DUF4446 PF14584.6 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 0.41 10.6 4.2 0.19 11.7 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Spc24 PF08286.11 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 1.1 9.6 14.8 0.49 10.7 9.4 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF4407 PF14362.6 NODE_35695_length_603_cov_3058.327465_g28628_i0forward_frame_3 - 2.9 7.2 10.0 1.6 8.1 8.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Bestrophin PF01062.21 NODE_35694_length_603_cov_5076.001761_g22939_i2forward_frame_3 - 0.8 9.0 6.7 0.11 11.8 2.5 1.6 2 0 0 2 2 2 0 Bestrophin, RFP-TM, chloride channel ADP_ribosyl_GH PF03747.14 ORF99536 - 3.4e-30 105.8 0.0 4.1e-30 105.5 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Gly-zipper_YMGG PF13441.6 ORF99536 - 0.093 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 YMGG-like Gly-zipper Pkinase PF00069.25 ORF92058 - 0.00013 21.4 0.4 0.00028 20.3 0.4 1.6 1 0 0 1 1 1 1 Protein kinase domain ENTH PF01417.20 ORF88694 - 0.00015 21.8 0.0 0.0002 21.4 0.0 1.2 1 0 0 1 1 1 1 ENTH domain Dot_icm_IcmQ PF09475.10 ORF88694 - 0.12 11.8 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Dot/Icm secretion system protein (dot_icm_IcmQ) Radial_spoke_3 PF06098.11 ORF87042 - 0.65 9.2 2.7 1.1 8.5 2.7 1.4 1 0 0 1 1 1 0 Radial spoke protein 3 Pex14_N PF04695.13 ORF86243 - 0.035 14.8 0.2 0.043 14.5 0.2 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF5053 PF16476.5 ORF85303 - 0.25 11.0 0.8 0.53 10.0 0.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5053) Ribosomal_S8e PF01201.22 ORF84767 - 8.6e-44 149.0 1.7 1.1e-43 148.6 1.7 1.2 1 0 0 1 1 1 1 Ribosomal protein S8e Enkurin PF13864.6 ORF84767 - 0.021 15.3 0.6 0.021 15.3 0.6 1.9 2 1 1 3 3 3 0 Calmodulin-binding dDENN PF03455.19 ORF83484 - 0.0063 16.5 0.2 0.021 14.8 0.0 2.0 3 0 0 3 3 3 1 dDENN domain DENN PF02141.21 ORF83484 - 0.045 13.7 0.0 0.093 12.7 0.0 1.5 1 0 0 1 1 1 0 DENN (AEX-3) domain ADAM_CR PF08516.12 ORF83071 - 4.4 7.7 8.9 1.9 8.9 1.1 2.4 2 1 0 2 2 2 0 ADAM cysteine-rich Ank PF00023.30 ORF82217 - 7.8e-15 54.6 0.2 1.9e-07 31.2 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF82217 - 2.4e-11 44.1 0.1 3.7e-11 43.5 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF82217 - 1.6e-10 41.3 0.0 3.3e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF82217 - 4.2e-09 35.9 0.0 0.00094 19.5 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF82217 - 2e-08 34.3 0.2 8.4e-08 32.3 0.1 2.0 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Imm10 PF15588.6 ORF81659 - 0.19 11.8 0.0 38 4.5 0.0 2.6 3 0 0 3 3 3 0 Immunity protein 10 DUF5637 PF18687.1 ORF81659 - 3.8 7.6 23.1 13 5.8 0.3 5.7 5 0 0 5 5 5 0 Family of unknown function (DUF5637) Peptidase_S74 PF13884.6 ORF79041 - 1.5e-08 34.8 0.0 2.7e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 ORF79041 - 0.038 13.5 0.1 0.13 11.9 0.0 1.8 2 0 0 2 2 2 0 Trimerisation motif Ham1p_like PF01725.16 ORF78070 - 0.23 11.3 0.0 0.32 10.9 0.0 1.1 1 0 0 1 1 1 0 Ham1 family EF-hand_6 PF13405.6 ORF77357 - 6.4e-06 25.7 1.0 0.049 13.6 0.0 4.8 4 1 1 5 5 5 1 EF-hand domain EF-hand_7 PF13499.6 ORF77357 - 1.7e-05 25.2 3.9 4.3e-05 23.9 0.8 2.5 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF77357 - 0.00044 19.6 5.2 0.017 14.6 0.0 3.8 5 1 1 6 6 6 2 EF hand p25-alpha PF05517.12 ORF77357 - 0.053 13.7 0.9 0.18 11.9 0.4 1.9 2 0 0 2 2 2 0 p25-alpha ADP_ribosyl_GH PF03747.14 ORF76495 - 3.4e-30 105.8 0.0 4.1e-30 105.5 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Gly-zipper_YMGG PF13441.6 ORF76495 - 0.093 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 YMGG-like Gly-zipper Acetyltransf_1 PF00583.25 ORF76169 - 4.8e-05 23.6 0.3 7e-05 23.0 0.3 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF76169 - 0.0027 17.6 0.0 0.0041 17.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF1999 PF09390.10 ORF76169 - 0.045 13.4 0.5 0.24 11.1 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1999) IF4E PF01652.18 ORF74305 - 6.1e-47 159.4 1.1 8.1e-47 159.0 1.1 1.2 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E DUF5082 PF16888.5 ORF72966 - 0.02 15.2 6.4 0.02 15.2 6.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) FDX-ACB PF03147.14 ORF72966 - 0.036 14.5 1.2 0.073 13.5 0.8 1.7 1 1 0 1 1 1 0 Ferredoxin-fold anticodon binding domain DUF1640 PF07798.11 ORF72966 - 0.59 10.2 12.7 1.1 9.2 12.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) Exonuc_VII_L PF02601.15 ORF72966 - 1.8 8.1 14.4 3 7.3 14.4 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF1664 PF07889.12 ORF72966 - 2.3 8.3 7.8 2.5 8.2 4.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF745 PF05335.13 ORF72966 - 2.4 7.9 6.8 1.2 8.8 4.4 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF745) FlaC_arch PF05377.11 ORF72966 - 2.7 8.4 11.0 0.16 12.4 1.3 3.1 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) SlyX PF04102.12 ORF72966 - 4.2 8.0 9.1 2.8 8.6 4.5 2.8 2 1 0 2 2 2 0 SlyX DUF2769 PF10967.8 ORF72046 - 0.051 14.2 0.9 0.89 10.3 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2769) Pkinase PF00069.25 ORF71183 - 4.5e-29 101.6 0.1 6.1e-29 101.2 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF71183 - 8.3e-10 38.4 0.0 1.1e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF71183 - 0.042 13.2 0.1 0.057 12.8 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family IpgD PF05925.12 ORF71183 - 0.049 12.2 0.0 0.059 11.9 0.0 1.2 1 0 0 1 1 1 0 Enterobacterial virulence protein IpgD Pkinase_fungal PF17667.1 ORF71183 - 0.08 11.7 0.0 0.099 11.4 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase UPF0565 PF10561.9 ORF69253 - 0.02 14.1 5.6 0.023 13.9 5.6 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 ABC_tran_CTD PF16326.5 ORF69253 - 0.056 13.7 2.5 0.18 12.0 0.3 2.1 2 0 0 2 2 2 0 ABC transporter C-terminal domain ISPD_C PF18706.1 ORF69253 - 0.11 12.1 5.0 0.16 11.6 5.0 1.2 1 0 0 1 1 1 0 D-ribitol-5-phosphate cytidylyltransferase C-terminal domain FSH1 PF03959.13 ORF67426 - 0.0019 17.9 0.1 0.008 15.9 0.0 1.9 1 1 1 2 2 2 1 Serine hydrolase (FSH1) Abhydrolase_1 PF00561.20 ORF67426 - 0.002 17.9 0.0 0.0029 17.3 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF67426 - 0.0029 16.9 0.1 0.006 15.9 0.0 1.5 2 0 0 2 2 2 1 Serine aminopeptidase, S33 DLH PF01738.18 ORF67426 - 0.031 13.8 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Dienelactone hydrolase family Abhydrolase_2 PF02230.16 ORF67426 - 0.038 13.8 0.1 0.072 12.9 0.1 1.4 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase DUF1891 PF09004.10 ORF65526 - 0.11 12.1 0.2 0.18 11.4 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1891) Phage_term_smal PF05944.12 ORF61965 - 0.077 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Phage small terminase subunit DUF4596 PF15363.6 ORF59237 - 0.42 10.9 0.2 0.42 10.9 0.2 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF4596) ADK PF00406.22 ORF58958 - 6.7e-46 156.1 0.1 8.1e-46 155.9 0.1 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF58958 - 1.9e-35 122.2 0.3 2.5e-35 121.8 0.3 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF58958 - 2.2e-09 38.0 0.1 3.1e-09 37.5 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF58958 - 1.9e-08 34.6 0.0 2.4e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF58958 - 2e-05 24.4 0.5 0.092 12.4 0.1 2.1 2 0 0 2 2 2 2 Thymidylate kinase AAA_19 PF13245.6 ORF58958 - 0.023 15.0 0.1 0.036 14.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF58958 - 0.062 12.6 0.0 0.093 12.0 0.0 1.4 1 1 0 1 1 1 0 Zeta toxin NTPase_1 PF03266.15 ORF58958 - 0.1 12.5 0.2 0.3 11.0 0.1 1.8 1 1 1 2 2 2 0 NTPase IF2_N PF04760.15 ORF5555 - 0.039 13.8 0.3 0.12 12.2 0.0 1.9 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region rve PF00665.26 ORF5499 - 2.1e-28 98.9 0.0 2.9e-28 98.4 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF5499 - 6.7e-21 74.2 1.1 1.5e-20 73.1 1.1 1.7 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF5499 - 2.9e-15 55.8 0.0 5.9e-15 54.8 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_IS240 PF13610.6 ORF5499 - 7.2e-06 26.3 0.1 1e-05 25.8 0.1 1.2 1 0 0 1 1 1 1 DDE domain FERM_M PF00373.18 ORF53793 - 0.17 12.3 5.9 3.9 7.9 1.1 2.5 2 1 0 2 2 2 0 FERM central domain Peptidase_S74 PF13884.6 ORF50246 - 1.5e-08 34.8 0.0 2.7e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 ORF50246 - 0.034 13.7 0.0 0.11 12.0 0.0 1.8 2 0 0 2 2 2 0 Trimerisation motif CLIP PF12032.8 ORF4591 - 0.2 12.0 3.7 2.1 8.7 0.2 2.7 2 1 0 2 2 2 0 Regulatory CLIP domain of proteinases Fic PF02661.18 ORF45744 - 1.3e-14 54.8 0.1 2.6e-14 53.8 0.1 1.4 1 0 0 1 1 1 1 Fic/DOC family Pro_isomerase PF00160.21 ORF42168 - 3.6e-47 160.6 0.2 4.1e-47 160.4 0.2 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RIH_assoc PF08454.11 ORF40418 - 0.38 10.6 3.9 2 8.3 2.8 2.5 1 1 0 1 1 1 0 RyR and IP3R Homology associated CDC37_M PF08565.11 ORF38845 - 5.1e-12 45.8 0.1 9e-12 45.0 0.1 1.4 1 0 0 1 1 1 1 Cdc37 Hsp90 binding domain CDC37_C PF08564.10 ORF38845 - 2.4e-10 40.4 0.4 1.8e-09 37.6 0.0 2.1 2 0 0 2 2 2 1 Cdc37 C terminal domain UBM PF14377.6 ORF38845 - 0.0039 16.6 0.4 0.15 11.5 0.1 2.4 2 0 0 2 2 2 1 Ubiquitin binding region Vwaint PF14624.6 ORF38535 - 5.9e-23 80.8 0.0 1e-22 80.0 0.0 1.5 1 0 0 1 1 1 1 VWA / Hh protein intein-like UBA PF00627.31 ORF38535 - 9.8e-07 28.6 0.3 2e-06 27.6 0.3 1.6 1 0 0 1 1 1 1 UBA/TS-N domain RuvA_C PF07499.13 ORF38535 - 0.00072 20.0 0.1 0.0019 18.6 0.1 1.7 1 0 0 1 1 1 1 RuvA, C-terminal domain DUF4116 PF13475.6 ORF37917 - 8.4e-31 105.5 0.0 1.3e-12 47.3 0.0 3.2 3 0 0 3 3 3 3 Domain of unknown function (DUF4116) DUF1757 PF08560.10 ORF37917 - 0.19 11.8 0.4 1.2 9.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1757) dDENN PF03455.19 ORF37822 - 0.0063 16.5 0.2 0.021 14.8 0.0 2.0 3 0 0 3 3 3 1 dDENN domain DENN PF02141.21 ORF37822 - 0.045 13.7 0.0 0.093 12.7 0.0 1.5 1 0 0 1 1 1 0 DENN (AEX-3) domain Antimicrobial19 PF08225.11 ORF36879 - 0.058 13.0 0.7 0.84 9.3 0.1 2.2 2 0 0 2 2 2 0 Pseudin antimicrobial peptide HCMVantigenic_N PF12154.8 ORF36368 - 0.11 12.6 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 Glycoprotein B N-terminal antigenic domain of HCMV Med11 PF10280.9 ORF3340 - 0.12 12.8 4.8 0.18 12.3 4.7 1.4 1 1 0 1 1 1 0 Mediator complex protein YlbE PF14003.6 ORF3340 - 0.41 11.1 3.2 15 6.1 0.4 2.4 2 0 0 2 2 2 0 YlbE-like protein CBP4 PF07960.11 ORF3340 - 2.5 8.0 12.2 4.6 7.1 0.3 2.8 2 1 1 3 3 3 0 CBP4 Coatomer_b_Cpla PF14806.6 ORF30857 - 1.2e-41 141.7 0.0 1.7e-41 141.2 0.0 1.2 1 0 0 1 1 1 1 Coatomer beta subunit appendage platform Coatamer_beta_C PF07718.12 ORF30857 - 1.1e-16 61.0 2.1 1.8e-16 60.3 0.4 2.1 2 1 0 2 2 2 1 Coatomer beta C-terminal region B2-adapt-app_C PF09066.10 ORF30857 - 0.0019 18.3 0.0 0.0033 17.5 0.0 1.4 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain gpW PF02831.15 ORF30857 - 0.027 14.4 0.1 0.053 13.4 0.1 1.4 1 0 0 1 1 1 0 gpW AP4E_app_platf PF14807.6 ORF30857 - 0.033 14.5 0.2 0.055 13.8 0.2 1.5 1 1 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform Coatomer_g_Cpla PF16381.5 ORF30857 - 0.059 13.5 0.0 0.095 12.8 0.0 1.4 1 0 0 1 1 1 0 Coatomer subunit gamma-1 C-terminal appendage platform Ras PF00071.22 ORF29464 - 2.1e-47 160.7 0.4 2.5e-47 160.5 0.4 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF29464 - 1.1e-29 103.0 0.8 1.7e-29 102.5 0.8 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF29464 - 8.7e-17 61.1 0.1 1.1e-16 60.8 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF29464 - 7.6e-09 35.3 0.2 9.5e-09 34.9 0.2 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF29464 - 4.2e-08 33.3 0.1 7e-08 32.6 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF29464 - 3.6e-05 23.4 0.2 8.1e-05 22.2 0.2 1.6 1 1 0 1 1 1 1 Ferrous iron transport protein B SRPRB PF09439.10 ORF29464 - 0.00021 20.8 0.0 0.00039 19.9 0.0 1.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AIG1 PF04548.16 ORF29464 - 0.00032 20.1 0.0 0.00053 19.4 0.0 1.4 1 0 0 1 1 1 1 AIG1 family RsgA_GTPase PF03193.16 ORF29464 - 0.00069 19.6 0.0 0.039 13.9 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_7 PF12775.7 ORF29464 - 0.0008 19.0 0.0 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region GTP_EFTU PF00009.27 ORF29464 - 0.0013 18.3 0.2 0.0053 16.3 0.0 1.8 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain DUF1679 PF07914.11 ORF29464 - 0.014 14.3 0.1 0.018 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) AAA_22 PF13401.6 ORF29464 - 0.029 14.6 0.0 0.045 14.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 ORF29464 - 0.032 13.6 0.0 0.046 13.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein Septin PF00735.18 ORF29464 - 0.032 13.5 0.1 0.054 12.8 0.1 1.4 1 0 0 1 1 1 0 Septin ABC_tran PF00005.27 ORF29464 - 0.056 14.0 0.0 0.074 13.6 0.0 1.3 1 0 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 ORF29464 - 0.069 13.5 0.0 0.09 13.2 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 ORF29464 - 0.085 13.3 0.4 2 8.8 0.0 2.3 2 0 0 2 2 2 0 RNA helicase PduV-EutP PF10662.9 ORF29464 - 0.11 12.2 0.0 0.38 10.5 0.0 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_5 PF07728.14 ORF29464 - 0.12 12.3 0.0 0.51 10.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.17 ORF29464 - 0.13 12.0 0.9 0.46 10.2 0.2 1.9 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein MCM PF00493.23 ORF29464 - 0.14 11.2 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 MCM P-loop domain DUF1168 PF06658.12 ORF28422 - 1.4e-19 70.2 15.7 5.7e-19 68.3 15.7 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1168) YPEB PF14620.6 ORF28422 - 0.007 15.8 6.9 0.0089 15.4 6.9 1.1 1 0 0 1 1 1 1 YpeB sporulation Dermcidin PF15291.6 ORF28422 - 2 9.0 8.8 1.6 9.3 6.8 1.9 1 1 0 1 1 1 0 Dermcidin, antibiotic peptide Hid1 PF12722.7 ORF28422 - 2.7 6.0 6.1 3.4 5.7 6.1 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein IL28A PF15177.6 ORF25369 - 0.1 12.4 4.6 0.18 11.6 4.6 1.4 1 0 0 1 1 1 0 Interleukin-28A TMEM135_C_rich PF15982.5 ORF22876 - 0.0041 17.7 0.4 0.0078 16.8 0.4 1.4 1 0 0 1 1 1 1 N-terminal cysteine-rich region of Transmembrane protein 135 DUF779 PF05610.11 ORF22504 - 0.29 11.4 2.2 0.66 10.3 2.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF779) MORN PF02493.20 ORF19335 - 2.5e-19 67.9 10.8 1.3e-07 31.1 1.1 3.5 3 0 0 3 3 3 3 MORN repeat RNase_J_C PF17770.1 ORF19335 - 0.1 13.7 0.8 0.2 12.7 0.8 1.4 1 0 0 1 1 1 0 Ribonuclease J C-terminal domain FA_synthesis PF02504.15 ORF18750 - 1.7e-67 227.8 0.0 2e-67 227.6 0.0 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein FAM60A PF15396.6 ORF16944 - 0.031 14.3 0.3 0.031 14.3 0.3 1.6 2 0 0 2 2 2 0 Protein Family FAM60A Pox_RNA_Pol_22 PF05273.13 ORF16944 - 0.052 13.3 1.1 1.4 8.6 0.5 2.3 2 0 0 2 2 2 0 Poxvirus RNA polymerase 22 kDa subunit C1_1 PF00130.22 ORF15632 - 0.28 11.1 5.7 1.6 8.6 5.8 2.0 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RING-like PF08746.11 ORF15632 - 0.44 10.9 12.1 0.082 13.2 7.5 2.1 1 1 1 2 2 2 0 RING-like domain PHD PF00628.29 ORF15632 - 0.55 10.2 9.2 0.63 10.0 1.1 2.5 1 1 1 2 2 2 0 PHD-finger dDENN PF03455.19 ORF151751 - 0.0063 16.5 0.2 0.021 14.8 0.0 2.0 3 0 0 3 3 3 1 dDENN domain DENN PF02141.21 ORF151751 - 0.045 13.7 0.0 0.093 12.7 0.0 1.5 1 0 0 1 1 1 0 DENN (AEX-3) domain DUF3522 PF12036.8 ORF1507 - 1.4 9.2 7.6 2.4 8.4 1.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3522) Arena_ncap_C PF17290.2 ORF150686 - 0.0056 16.0 1.7 0.0084 15.5 1.7 1.3 1 0 0 1 1 1 1 Arenavirus nucleocapsid C-terminal domain SesA PF17107.5 ORF150686 - 0.0075 16.4 1.2 0.0075 16.4 1.2 2.2 1 1 1 2 2 2 1 N-terminal domain on NACHT_NTPase and P-loop NTPases Anti-adapt_IraP PF10796.9 ORF150686 - 0.011 16.2 0.6 0.027 15.0 0.6 1.8 1 0 0 1 1 1 0 Sigma-S stabilisation anti-adaptor protein Z1 PF10593.9 ORF150686 - 0.037 13.5 7.2 0.049 13.1 7.2 1.2 1 0 0 1 1 1 0 Z1 domain LMBR1 PF04791.16 ORF150686 - 0.1 11.5 7.1 0.12 11.3 7.1 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein TCTP PF00838.17 ORF150686 - 0.7 10.2 11.9 0.081 13.3 5.4 2.1 1 1 1 2 2 2 0 Translationally controlled tumour protein CHIP_TPR_N PF18391.1 ORF150686 - 3.5 8.4 9.0 1.3 9.8 2.0 2.6 1 1 1 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain ADP_ribosyl_GH PF03747.14 ORF150657 - 3.4e-30 105.8 0.0 4.1e-30 105.5 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Gly-zipper_YMGG PF13441.6 ORF150657 - 0.093 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 YMGG-like Gly-zipper Pkinase PF00069.25 ORF147138 - 7.6e-12 45.1 0.0 1.1e-11 44.6 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain DUF2880 PF11082.8 ORF144904 - 0.11 12.8 0.1 10 6.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2880) DOMON PF03351.17 ORF144880 - 1.6e-16 60.6 1.0 2.8e-16 59.9 1.0 1.4 1 0 0 1 1 1 1 DOMON domain CDH-cyt PF16010.5 ORF144880 - 6.4e-07 29.2 3.3 9.5e-07 28.7 3.4 1.3 1 1 0 1 1 1 1 Cytochrome domain of cellobiose dehydrogenase Jacalin PF01419.17 ORF144560 - 0.00088 19.2 0.1 0.0012 18.8 0.1 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain MqsA_antitoxin PF15731.5 ORF141365 - 0.044 13.9 0.2 0.09 12.9 0.2 1.5 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA DUF1246 PF06849.12 ORF141365 - 0.11 12.5 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1246) NAD_binding_11 PF14833.6 ORF139538 - 1.1e-20 74.1 0.1 1.3e-20 73.8 0.1 1.1 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Transcrip_reg PF01709.20 ORF139281 - 2.7e-59 200.5 0.1 3.1e-59 200.3 0.1 1.0 1 0 0 1 1 1 1 Transcriptional regulator Gram_pos_anchor PF00746.21 ORF139176 - 8.1 6.5 5.7 14 5.7 1.3 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Kelch_1 PF01344.25 ORF136824 - 1.8e-32 110.6 0.8 2.3e-11 43.1 0.0 4.3 4 0 0 4 4 4 4 Kelch motif Kelch_6 PF13964.6 ORF136824 - 2.3e-14 53.0 4.2 0.0021 18.3 0.2 5.1 1 1 3 4 4 4 4 Kelch motif Kelch_2 PF07646.15 ORF136824 - 5.6e-11 42.0 0.1 0.14 12.2 0.0 4.4 4 0 0 4 4 4 4 Kelch motif Kelch_4 PF13418.6 ORF136824 - 2e-09 37.3 0.0 0.00032 20.6 0.0 3.4 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF136824 - 1.2e-07 31.6 0.1 0.39 10.8 0.0 4.1 4 0 0 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF136824 - 0.00011 22.4 6.6 0.072 13.4 0.1 4.2 4 1 0 4 4 4 2 Galactose oxidase, central domain Glyoxal_oxid_N PF07250.11 ORF136824 - 0.0084 15.3 0.0 0.015 14.5 0.0 1.4 1 1 0 1 1 1 1 Glyoxal oxidase N-terminus AAA_30 PF13604.6 ORF136256 - 0.0024 17.6 0.0 0.0033 17.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain UPF0126 PF03458.13 ORF13568 - 1.9e-34 117.4 22.8 1.4e-20 73.0 7.8 2.5 3 0 0 3 3 3 2 UPF0126 domain AzlD PF05437.12 ORF13568 - 0.012 15.8 1.3 0.012 15.8 1.3 2.5 1 1 1 2 2 2 0 Branched-chain amino acid transport protein (AzlD) DUF4845 PF16137.5 ORF135431 - 0.096 13.6 1.8 0.14 13.1 0.1 2.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4845) Peripla_BP_6 PF13458.6 ORF13507 - 2.9e-07 30.5 0.0 3.6e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 ORF13507 - 0.089 11.9 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 Receptor family ligand binding region GST_C_2 PF13410.6 ORF133898 - 4.8e-07 29.7 2.2 7.2e-07 29.1 2.2 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF133898 - 2.2e-05 25.0 0.0 3.6e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF133898 - 0.0003 21.0 0.0 0.00046 20.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF133898 - 0.00057 20.0 0.0 0.0011 19.1 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF133898 - 0.13 13.0 0.0 0.2 12.4 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain Trans_reg_C PF00486.28 ORF13338 - 1e-18 67.1 0.0 1.9e-18 66.3 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 ORF13338 - 7.4e-17 61.5 0.1 3.3e-16 59.5 0.0 1.9 2 0 0 2 2 2 1 Response regulator receiver domain Orbi_VP5 PF00901.17 ORF131514 - 0.075 11.4 0.2 0.11 10.9 0.2 1.1 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP5 PocR PF10114.9 ORF131514 - 0.39 10.5 1.6 0.55 10.0 1.6 1.3 1 0 0 1 1 1 0 Sensory domain found in PocR Mu-conotoxin PF05374.12 ORF128257 - 0.6 10.2 7.8 0.62 10.1 0.3 3.0 2 0 0 2 2 2 0 Mu-Conotoxin DUF591 PF04569.14 ORF127489 - 0.5 10.5 0.1 0.5 10.5 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function Rap1-DNA-bind PF09197.10 ORF127084 - 0.43 11.2 4.0 0.26 11.9 1.8 1.8 1 1 1 2 2 2 0 Rap1, DNA-binding DAGAT PF03982.13 ORF123928 - 1.6e-35 122.5 0.0 1.9e-35 122.3 0.0 1.0 1 0 0 1 1 1 1 Diacylglycerol acyltransferase TEX12 PF15219.6 ORF123928 - 0.17 12.2 0.0 0.31 11.4 0.0 1.4 1 0 0 1 1 1 0 Testis-expressed 12 Med11 PF10280.9 ORF122809 - 0.12 12.8 4.8 0.18 12.3 4.7 1.4 1 1 0 1 1 1 0 Mediator complex protein YlbE PF14003.6 ORF122809 - 0.41 11.1 3.2 15 6.1 0.4 2.4 2 0 0 2 2 2 0 YlbE-like protein CBP4 PF07960.11 ORF122809 - 2.4 8.0 12.2 4.6 7.1 0.3 2.9 2 1 1 3 3 3 0 CBP4 Med11 PF10280.9 ORF122779 - 0.12 12.8 4.8 0.18 12.3 4.7 1.4 1 1 0 1 1 1 0 Mediator complex protein YlbE PF14003.6 ORF122779 - 0.41 11.1 3.2 15 6.1 0.4 2.4 2 0 0 2 2 2 0 YlbE-like protein CBP4 PF07960.11 ORF122779 - 2.5 8.0 12.2 4.6 7.1 0.3 2.8 2 1 1 3 3 3 0 CBP4 PKD PF00801.20 ORF121252 - 0.074 12.9 0.1 0.17 11.8 0.1 1.6 1 0 0 1 1 1 0 PKD domain Ank_2 PF12796.7 ORF120106 - 3.9e-27 94.7 3.3 1.1e-16 61.2 0.4 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF120106 - 6.4e-27 93.3 14.5 9.6e-10 38.5 0.7 5.0 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF120106 - 1.8e-23 82.5 2.3 1.7e-08 34.9 0.1 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF120106 - 4.6e-20 69.6 2.6 0.0017 18.7 0.1 5.1 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF120106 - 1.9e-18 66.0 12.2 6.4e-05 23.2 0.2 5.2 6 0 0 6 6 6 4 Ankyrin repeat PUB_1 PF18486.1 ORF120106 - 0.028 14.3 5.3 1 9.3 0.1 3.3 2 1 1 3 3 3 0 PNGase/UBA- or UBX-containing domain HypA PF01155.19 ORF120106 - 0.039 14.0 0.0 0.084 12.9 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EccE PF11203.8 ORF120106 - 0.85 10.0 7.4 5.6 7.4 6.6 2.5 1 1 0 1 1 1 0 Putative type VII ESX secretion system translocon, EccE Cytochrom_NNT PF03264.14 ORF119299 - 1.3e-77 259.4 2.9 1.5e-77 259.2 2.9 1.0 1 0 0 1 1 1 1 NapC/NirT cytochrome c family, N-terminal region Cytochrom_c3_2 PF14537.6 ORF119299 - 5.8e-08 33.1 14.1 0.00085 19.7 1.0 2.1 2 0 0 2 2 2 2 Cytochrome c3 Cytochrome_C7 PF14522.6 ORF119299 - 1.4e-07 31.4 15.6 2.7e-05 24.1 3.7 2.8 2 1 1 3 3 3 3 Cytochrome c7 and related cytochrome c Cytochrom_CIII PF02085.16 ORF119299 - 1.4e-06 28.5 13.4 0.00041 20.6 5.2 2.2 2 0 0 2 2 2 2 Class III cytochrome C family Paired_CXXCH_1 PF09699.10 ORF119299 - 1.6e-06 27.8 10.6 0.21 11.4 4.8 3.7 3 1 0 3 3 3 3 Doubled CXXCH motif (Paired_CXXCH_1) Neuropep_like PF15161.6 ORF119299 - 0.01 15.5 6.3 0.18 11.5 0.1 3.6 4 0 0 4 4 4 0 Neuropeptide-like GF_recep_IV PF14843.6 ORF119299 - 0.013 15.3 2.1 0.013 15.3 2.1 2.3 2 1 0 2 2 2 0 Growth factor receptor domain IV DUF3463 PF11946.8 ORF119299 - 0.12 12.2 5.0 0.4 10.5 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3463) Zn-ribbon_8 PF09723.10 ORF119299 - 1.3 9.3 7.1 21 5.3 0.2 3.5 3 1 1 4 4 4 0 Zinc ribbon domain Cytochrome_C554 PF13435.6 ORF119299 - 1.5 9.8 16.9 7.9 7.5 6.6 3.1 2 2 0 2 2 2 0 Cytochrome c554 and c-prime zf-C4pol PF14260.6 ORF119299 - 2 8.9 10.2 4.6 7.8 0.6 2.8 2 2 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta Cytochrome_P460 PF16694.5 ORF119299 - 3.1 8.2 21.4 3.4 8.0 0.4 4.1 2 2 2 4 4 4 0 Cytochrome P460 DHC PF09626.10 ORF119299 - 6.4 7.7 16.9 1.1 10.1 0.4 3.7 1 1 4 5 5 5 0 Dihaem cytochrome c PROL5-SMR PF15621.6 ORF118989 - 0.087 13.4 0.0 0.32 11.5 0.0 1.9 2 0 0 2 2 2 0 Proline-rich submaxillary gland androgen-regulated family Tetraspanin PF00335.20 ORF116365 - 0.0072 16.1 4.0 0.01 15.5 3.9 1.3 1 1 0 1 1 1 1 Tetraspanin family Myelin_PLP PF01275.19 ORF116365 - 0.013 15.4 1.8 0.013 15.4 1.8 1.4 1 1 0 1 1 1 0 Myelin proteolipid protein (PLP or lipophilin) DUF2157 PF09925.9 ORF116365 - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) Stevor PF17410.2 ORF116365 - 0.3 10.6 6.6 0.22 11.0 0.7 2.1 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame DUF4033 PF13225.6 ORF114800 - 6.5e-27 93.4 2.6 1.1e-26 92.6 2.6 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4033) Pkinase PF00069.25 ORF113472 - 2.6e-24 86.0 1.0 3.2e-24 85.7 1.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF113472 - 5.6e-15 55.3 0.3 7.6e-15 54.9 0.3 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF113472 - 2.7e-07 30.1 0.4 4.5e-07 29.4 0.1 1.5 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF113472 - 7.8e-07 29.3 0.0 0.00069 19.6 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF113472 - 0.00042 20.0 0.1 0.00062 19.4 0.1 1.4 1 0 0 1 1 1 1 RIO1 family DUF1679 PF07914.11 ORF113472 - 0.0095 14.8 0.1 0.014 14.3 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) SIS PF01380.22 ORF112257 - 1.2e-16 60.7 0.0 1.7e-16 60.2 0.0 1.2 1 0 0 1 1 1 1 SIS domain bact-PGI_C PF10432.9 ORF112257 - 5.6e-05 23.2 0.0 0.00018 21.6 0.0 1.7 2 0 0 2 2 2 1 Bacterial phospho-glucose isomerase C-terminal SIS domain Disintegrin PF00200.23 ORF111202 - 0.17 12.7 5.3 0.41 11.5 5.3 1.7 1 0 0 1 1 1 0 Disintegrin Peptidase_S74 PF13884.6 ORF109747 - 1.5e-08 34.8 0.0 2.7e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 ORF109747 - 0.038 13.5 0.1 0.13 11.9 0.0 1.8 2 0 0 2 2 2 0 Trimerisation motif PSI_PsaJ PF01701.18 ORF109685 - 0.0032 18.0 0.1 0.0059 17.1 0.1 1.5 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ Presenilin PF01080.17 ORF10757 - 2.1 7.0 3.8 2.6 6.7 3.8 1.1 1 0 0 1 1 1 0 Presenilin HTH_Tnp_Tc5 PF03221.16 ORF104981 - 0.019 15.0 0.0 0.037 14.1 0.0 1.4 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain eIF_4EBP PF05456.11 ORF104365 - 3 7.8 7.8 7.4 6.5 6.2 2.4 2 1 0 2 2 2 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Glutaredoxin2_C PF04399.13 ORF103956 - 3.4e-38 130.4 0.0 4.2e-38 130.1 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin 2, C terminal domain GST_N_3 PF13417.6 ORF103956 - 0.0041 17.5 0.0 0.0099 16.3 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF103956 - 0.035 14.1 0.0 0.073 13.1 0.0 1.6 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Sua5_yciO_yrdC PF01300.18 ORF102145 - 7.2e-29 100.5 0.0 8.4e-29 100.3 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination Pribosyltran_N PF13793.6 ORF1014 - 0.095 12.7 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 N-terminal domain of ribose phosphate pyrophosphokinase BMC PF00936.19 NODE_36124_length_595_cov_3.496429_g29009_i0reverse_frame_1 - 0.047 13.7 0.0 0.1 12.6 0.0 1.6 1 0 0 1 1 1 0 BMC domain NUDE_C PF04880.13 NODE_36119_length_595_cov_75.789286_g29005_i0forward_frame_1 - 0.72 10.3 2.8 1.1 9.7 2.8 1.2 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region RCC1_2 PF13540.6 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 4e-06 26.5 12.8 0.16 11.8 0.7 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.00036 21.0 0.0 10 6.7 0.0 3.8 4 1 0 4 4 4 1 Spectrin repeat DUF155 PF02582.14 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.00091 19.4 0.6 21 5.1 0.0 4.0 2 1 1 3 3 3 1 Uncharacterised ACR, YagE family COG1723 POX PF07526.11 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.028 15.0 0.9 14 6.3 0.0 3.3 4 0 0 4 4 4 0 Associated with HOX Inhibitor_I36 PF03995.13 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.048 13.6 3.2 6.7 6.7 0.0 3.2 3 0 0 3 3 3 0 Peptidase inhibitor family I36 MinC_C PF03775.16 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.074 13.0 1.5 7.3 6.6 0.0 3.6 3 1 0 4 4 4 0 Septum formation inhibitor MinC, C-terminal domain PPR_3 PF13812.6 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_1 - 0.088 12.9 0.0 12 6.1 0.0 2.6 2 0 0 2 2 2 0 Pentatricopeptide repeat domain DUF2016 PF09436.10 NODE_36096_length_595_cov_462.928571_g28983_i0forward_frame_1 - 0.0057 16.4 0.2 1.3 8.9 0.0 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF2016) Colicin-DNase PF12639.7 NODE_36092_length_595_cov_1026.180357_g28979_i0forward_frame_1 - 0.031 15.1 0.1 0.044 14.6 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin DUF3623 PF12291.8 NODE_36092_length_595_cov_1026.180357_g28979_i0forward_frame_1 - 0.086 12.0 0.1 0.15 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3623) Bestrophin PF01062.21 NODE_36086_length_595_cov_5148.466071_g22939_i3forward_frame_1 - 0.24 10.8 4.9 0.043 13.2 1.5 1.5 2 0 0 2 2 2 0 Bestrophin, RFP-TM, chloride channel POTRA PF07244.15 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 1.7e-33 115.0 0.4 2.1e-12 47.5 0.0 3.0 3 0 0 3 3 3 3 Surface antigen variable number repeat POTRA_2 PF08479.11 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 9.2e-06 25.4 0.0 0.018 14.8 0.0 3.2 3 0 0 3 3 3 2 POTRA domain, ShlB-type POTRA_1 PF08478.10 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 0.00013 22.2 0.0 0.11 12.9 0.0 3.5 4 0 0 4 4 4 1 POTRA domain, FtsQ-type Polysacc_deac_3 PF15421.6 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 0.045 12.2 0.0 0.088 11.3 0.0 1.5 1 1 0 1 1 1 0 Putative polysaccharide deacetylase DUF4101 PF13355.6 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 0.064 13.7 0.1 7.1 7.1 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4101) DAO_C PF16901.5 NODE_36080_length_596_cov_2.474153_g28969_i0forward_frame_1 - 0.12 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 C-terminal domain of alpha-glycerophosphate oxidase SCRG1 PF15224.6 NODE_36064_length_596_cov_84.299465_g28953_i0forward_frame_1 - 1.9 8.6 5.3 3.1 8.0 5.3 1.3 1 0 0 1 1 1 0 Scrapie-responsive protein 1 DUF668 PF05003.12 NODE_36061_length_596_cov_89.008913_g28950_i0forward_frame_1 - 0.041 14.4 1.0 2.1 8.9 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF668) ParBc PF02195.18 NODE_36036_length_596_cov_280.729055_g28925_i0forward_frame_1 - 0.0024 18.1 0.0 0.0045 17.2 0.0 1.4 1 0 0 1 1 1 1 ParB-like nuclease domain AP3D1 PF06375.11 NODE_35999_length_597_cov_246.112100_g28895_i0reverse_frame_1 - 0.18 12.0 6.0 0.24 11.6 6.0 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 CitX PF03802.14 NODE_35963_length_598_cov_163.994671_g28865_i0reverse_frame_2 - 0.035 13.9 0.3 0.051 13.3 0.3 1.4 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Epimerase PF01370.21 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_3 - 2.3e-19 69.8 0.0 2.6e-19 69.6 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_3 - 3.5e-17 62.8 0.0 4e-17 62.6 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_3 - 3.8e-15 55.6 0.0 4.8e-15 55.3 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_3 - 1.4e-08 34.3 0.0 6.9e-08 32.0 0.0 1.9 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_3 - 2.1e-07 30.4 0.1 2.8e-07 30.0 0.1 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_3 - 1.4e-06 28.4 0.0 1.9e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_3 - 0.00035 20.5 0.0 0.00073 19.5 0.0 1.5 1 1 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_3 - 0.0018 17.4 0.1 0.0032 16.6 0.1 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain Sacchrp_dh_NADP PF03435.18 NODE_35950_length_598_cov_767.721137_g10786_i1forward_frame_3 - 0.0048 17.1 0.0 0.42 10.9 0.0 2.1 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain DUF971 PF06155.12 NODE_35941_length_599_cov_2.856383_g28846_i0forward_frame_3 - 0.12 13.1 7.8 1.8 9.3 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF971) CPDase PF07823.11 NODE_35938_length_599_cov_5.136525_g28843_i0forward_frame_2 - 0.15 11.8 2.3 0.091 12.4 0.7 1.4 2 0 0 2 2 2 0 Cyclic phosphodiesterase-like protein YtxH PF12732.7 NODE_35938_length_599_cov_5.136525_g28843_i0forward_frame_2 - 0.89 10.1 12.7 3.8 8.1 1.5 3.3 1 1 1 2 2 2 0 YtxH-like protein Spc7 PF08317.11 NODE_35938_length_599_cov_5.136525_g28843_i0forward_frame_2 - 4.5 6.1 25.4 0.36 9.7 1.8 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein Cnn_1N PF07989.11 NODE_35938_length_599_cov_5.136525_g28843_i0forward_frame_2 - 5.2 7.3 24.7 2.3 8.4 2.0 4.2 2 1 2 4 4 4 0 Centrosomin N-terminal motif 1 MIT PF04212.18 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 9.6e-05 22.4 10.2 0.00013 22.0 9.4 1.7 1 1 0 1 1 1 1 MIT (microtubule interacting and transport) domain Peptidase_U49 PF10463.9 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 0.065 13.0 3.3 0.055 13.2 2.1 1.5 1 1 0 1 1 1 0 Peptidase U49 PMEI PF04043.15 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 0.22 11.9 3.2 0.33 11.3 3.2 1.2 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor Syntaxin-18_N PF10496.9 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 0.84 9.9 6.9 0.3 11.4 0.9 2.6 1 1 1 2 2 2 0 SNARE-complex protein Syntaxin-18 N-terminus DUF4259 PF14078.6 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 0.95 10.2 4.7 0.71 10.6 3.4 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4259) STAT_alpha PF01017.20 NODE_35933_length_599_cov_71.943262_g28838_i0reverse_frame_2 - 3 7.7 9.5 8.2 6.3 5.3 2.2 1 1 1 2 2 2 0 STAT protein, all-alpha domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks117.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks117.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks117.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks117.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4820 PF16091.5 NODE_35895_length_600_cov_2.366372_g28805_i0reverse_frame_3 - 0.045 13.1 1.6 0.058 12.8 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) GntR PF00392.21 NODE_35895_length_600_cov_2.366372_g28805_i0reverse_frame_2 - 3e-15 55.6 0.0 6.2e-15 54.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family LRR_6 PF13516.6 NODE_35893_length_600_cov_2.984071_g28803_i0reverse_frame_3 - 0.00018 21.3 2.3 0.0004 20.2 1.3 4.1 4 0 0 4 4 4 2 Leucine Rich repeat LRR_4 PF12799.7 NODE_35893_length_600_cov_2.984071_g28803_i0reverse_frame_3 - 0.0093 16.4 2.8 0.0093 16.4 2.8 4.5 1 1 3 4 4 4 3 Leucine Rich repeats (2 copies) DUF3683 PF12447.8 NODE_35890_length_600_cov_3.886726_g28800_i0reverse_frame_3 - 0.099 12.8 0.4 0.26 11.4 0.4 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3683) PDCD7 PF16021.5 NODE_35890_length_600_cov_3.886726_g28800_i0reverse_frame_3 - 0.15 11.2 6.8 0.2 10.7 6.8 1.1 1 0 0 1 1 1 0 Programmed cell death protein 7 DUF4685 PF15737.5 NODE_35875_length_600_cov_114.619469_g28786_i0forward_frame_3 - 0.095 13.1 4.7 0.17 12.3 4.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4685) Ribosomal_S13 PF00416.22 NODE_35855_length_600_cov_364.019469_g26958_i1reverse_frame_3 - 1.9e-48 164.0 3.3 2.7e-48 163.6 3.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S13/S18 Armet PF10208.9 NODE_35855_length_600_cov_364.019469_g26958_i1reverse_frame_3 - 0.0065 16.4 0.1 0.058 13.3 0.0 2.0 1 1 1 2 2 2 1 Degradation arginine-rich protein for mis-folding RCC1_2 PF13540.6 ORF99170 - 5.7e-09 35.5 12.5 0.21 11.4 0.4 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat 7TM_GPCR_Srbc PF10316.9 ORF98697 - 4.2 6.8 10.1 1.3 8.4 7.6 1.4 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srbc Cupin_8 PF13621.6 ORF98185 - 4.8e-23 82.2 0.1 6.3e-23 81.8 0.1 1.1 1 0 0 1 1 1 1 Cupin-like domain JmjC PF02373.22 ORF98185 - 0.039 14.4 0.0 0.054 13.9 0.0 1.3 1 0 0 1 1 1 0 JmjC domain, hydroxylase Cupin_2 PF07883.11 ORF98185 - 0.069 12.9 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Cupin domain DUF1148 PF06618.11 ORF98069 - 0.8 9.9 10.9 0.12 12.5 1.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1148) ABC_tran_Xtn PF12848.7 ORF97384 - 0.21 11.6 0.9 0.36 10.9 0.1 1.7 2 0 0 2 2 2 0 ABC transporter ABC_membrane PF00664.23 ORF90730 - 1.7e-05 24.6 1.6 2.5e-05 24.1 1.6 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region FA_desaturase PF00487.24 ORF90730 - 0.14 12.0 1.9 0.24 11.2 1.9 1.5 1 1 0 1 1 1 0 Fatty acid desaturase DUF2207 PF09972.9 ORF90730 - 0.18 10.5 1.0 0.25 10.1 0.1 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) PglZ PF08665.12 ORF90536 - 0.017 15.2 1.6 0.047 13.8 1.6 1.8 1 1 0 1 1 1 0 PglZ domain BssC_TutF PF08201.11 ORF90536 - 0.043 13.8 0.4 0.11 12.5 0.4 1.7 1 0 0 1 1 1 0 BssC/TutF protein Imm40 PF15569.6 ORF89842 - 0.043 13.9 0.8 3 8.0 0.1 2.3 2 0 0 2 2 2 0 Immunity protein 40 Phage_pRha PF09669.10 ORF89842 - 0.11 13.1 3.0 0.17 12.5 1.8 2.0 2 0 0 2 2 2 0 Phage regulatory protein Rha (Phage_pRha) DUF1919 PF08942.10 ORF89842 - 0.11 12.0 5.5 1.2 8.5 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1919) Nitrate_red_del PF02613.15 ORF87469 - 4.5e-24 85.0 0.4 4.5e-24 85.0 0.4 1.7 1 1 1 2 2 2 1 Nitrate reductase delta subunit Haem_oxygenas_2 PF14518.6 ORF87469 - 0.056 13.2 0.0 0.09 12.6 0.0 1.4 1 0 0 1 1 1 0 Iron-containing redox enzyme Flavodoxin_1 PF00258.25 ORF8688 - 5e-28 98.1 0.0 6e-28 97.8 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 ORF8688 - 0.0035 17.0 0.0 0.021 14.5 0.0 2.1 1 1 1 2 2 2 1 Flavodoxin domain MMR_HSR1_Xtn PF16897.5 ORF85333 - 2.4e-28 98.3 1.4 4.2e-28 97.5 1.4 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain TGS PF02824.21 ORF85333 - 3.4e-12 46.2 0.0 5.9e-12 45.5 0.0 1.4 1 0 0 1 1 1 1 TGS domain IQ PF00612.27 ORF83945 - 3.1e-08 32.7 11.6 0.0029 17.3 1.2 3.6 3 0 0 3 3 3 3 IQ calmodulin-binding motif DUF515 PF04415.12 ORF83945 - 0.015 13.7 0.4 0.017 13.5 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) AF0941-like PF14591.6 ORF83945 - 0.058 14.0 0.3 0.099 13.2 0.3 1.4 1 0 0 1 1 1 0 AF0941-like Pex2_Pex12 PF04757.14 ORF83945 - 0.069 12.7 0.1 0.13 11.9 0.1 1.6 1 1 0 1 1 1 0 Pex2 / Pex12 amino terminal region ArAE_1 PF06081.11 ORF83945 - 0.21 11.7 1.2 0.35 11.0 0.2 1.7 2 0 0 2 2 2 0 Aromatic acid exporter family member 1 Kri1 PF05178.12 ORF83945 - 0.81 10.3 4.5 1.6 9.4 1.0 2.3 2 0 0 2 2 2 0 KRI1-like family CLZ PF16526.5 ORF83222 - 0.00079 19.7 11.4 0.3 11.5 0.3 2.4 1 1 1 2 2 2 2 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Cep57_MT_bd PF06657.13 ORF83222 - 0.00085 19.7 6.3 0.5 10.9 0.0 3.0 2 1 1 3 3 3 3 Centrosome microtubule-binding domain of Cep57 LPP PF04728.13 ORF83222 - 0.01 16.2 5.2 0.073 13.5 2.3 3.0 3 0 0 3 3 3 0 Lipoprotein leucine-zipper V_ATPase_I PF01496.19 ORF83222 - 0.51 8.2 14.7 0.63 7.9 14.7 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family APG6_N PF17675.1 ORF83222 - 0.55 10.7 16.2 1.1 9.8 16.2 1.5 1 0 0 1 1 1 0 Apg6 coiled-coil region TSC22 PF01166.18 ORF83222 - 0.86 10.0 12.5 1.9 8.8 0.1 3.2 2 1 1 3 3 3 0 TSC-22/dip/bun family DUF4140 PF13600.6 ORF83222 - 1.2 9.6 6.2 2.5 8.6 2.9 2.3 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF2730 PF10805.8 ORF83222 - 1.3 9.2 7.9 2 8.6 3.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) DUF3450 PF11932.8 ORF83222 - 1.8 7.8 12.0 0.18 11.1 7.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF4407 PF14362.6 ORF83222 - 4.9 6.4 18.8 1.1e+02 1.9 18.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Seryl_tRNA_N PF02403.22 ORF83222 - 5 7.4 24.6 1.9 8.7 0.8 2.9 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain HI0933_like PF03486.14 ORF82966 - 0.14 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein MFS_1 PF07690.16 ORF82468 - 1.1e-11 44.3 13.1 1.1e-11 44.3 13.1 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily FPN1 PF06963.12 ORF82468 - 0.06 11.9 5.8 0.07 11.7 5.8 1.2 1 0 0 1 1 1 0 Ferroportin1 (FPN1) Peptidase_M48_N PF16491.5 ORF82468 - 0.1 12.5 3.2 0.18 11.7 3.2 1.5 1 0 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices MFS_1 PF07690.16 ORF81275 - 1.2e-08 34.3 18.0 1.5e-08 33.9 18.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily FlgN PF05130.12 ORF78401 - 1.3e-18 68.0 11.4 3.1e-18 66.7 11.4 1.6 1 1 0 1 1 1 1 FlgN protein CorA PF01544.18 ORF78401 - 0.055 12.8 3.4 0.069 12.4 3.4 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF745 PF05335.13 ORF78401 - 0.3 10.8 5.1 0.43 10.3 5.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) EF-hand_1 PF00036.32 ORF77517 - 5.3e-08 31.9 0.1 0.0021 17.5 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF77517 - 4.2e-05 23.9 0.5 9.6e-05 22.8 0.5 1.6 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF77517 - 9.4e-05 22.0 0.1 0.14 12.2 0.0 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF77517 - 0.00031 20.1 0.3 0.38 10.3 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF77517 - 0.0032 17.3 0.2 0.1 12.5 0.1 2.5 2 0 0 2 2 2 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF77517 - 0.12 12.7 0.0 0.64 10.4 0.0 1.9 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Ion_trans PF00520.31 ORF77517 - 0.16 11.2 0.8 0.21 10.8 0.8 1.1 1 0 0 1 1 1 0 Ion transport protein Phyto-Amp PF15438.6 ORF77517 - 0.18 11.6 0.2 0.26 11.1 0.2 1.3 1 0 0 1 1 1 0 Antigenic membrane protein of phytoplasma EF-hand_10 PF14788.6 ORF77517 - 0.18 11.7 0.5 1.3 9.0 0.0 2.2 1 1 1 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF77517 - 0.34 10.9 1.0 4.2 7.4 0.1 2.1 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand HAD_2 PF13419.6 ORF72766 - 6.9e-13 49.1 0.0 9.4e-13 48.6 0.0 1.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF72766 - 7.1e-09 36.3 0.0 4.9e-08 33.5 0.0 1.9 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF72766 - 7.3e-07 29.2 0.0 1.7e-06 28.0 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Acid_PPase PF12689.7 ORF72766 - 1.3e-05 25.1 0.0 0.00016 21.6 0.0 2.1 1 1 0 1 1 1 1 Acid Phosphatase HAD PF12710.7 ORF72766 - 0.00036 21.0 0.1 0.0004 20.8 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 ORF72766 - 0.011 15.5 0.0 0.08 12.6 0.0 2.4 1 1 1 2 2 2 0 Polynucleotide kinase 3 phosphatase DUF1298 PF06974.13 ORF72177 - 0.0031 17.5 0.0 0.0046 16.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Serglycin PF04360.12 ORF71855 - 9.3 6.2 8.6 17 5.4 8.3 1.5 1 1 0 1 1 1 0 Serglycin MyTH4 PF00784.17 ORF71591 - 0.053 14.0 17.1 1.7 9.2 0.1 4.6 5 0 0 5 5 5 0 MyTH4 domain PspB PF06667.12 ORF69742 - 1.2 9.3 6.0 0.14 12.3 0.6 2.0 2 1 0 2 2 2 0 Phage shock protein B TALPID3 PF15324.6 ORF69742 - 2 6.0 10.7 2.3 5.8 10.7 1.0 1 0 0 1 1 1 0 Hedgehog signalling target Zip PF02535.22 ORF69742 - 5 6.2 8.4 6.3 5.9 8.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Ras PF00071.22 ORF67688 - 4.1e-52 176.0 0.9 5.3e-52 175.7 0.9 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF67688 - 5.1e-28 97.7 1.2 6.1e-28 97.5 0.3 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF67688 - 8.3e-14 51.4 0.3 9.8e-14 51.2 0.3 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF67688 - 2.4e-06 27.1 0.3 3e-06 26.8 0.3 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF67688 - 0.00067 19.2 0.2 0.0014 18.2 0.1 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF67688 - 0.00073 19.5 1.9 0.18 11.7 0.3 2.4 1 1 2 3 3 3 2 RsgA GTPase MMR_HSR1 PF01926.23 ORF67688 - 0.0024 18.0 0.2 0.004 17.2 0.2 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF1640 PF07798.11 ORF67688 - 0.0057 16.7 0.3 0.0078 16.3 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) G-alpha PF00503.20 ORF67688 - 0.0097 15.1 5.8 0.067 12.3 2.5 2.5 1 1 1 2 2 2 1 G-protein alpha subunit FeoB_N PF02421.18 ORF67688 - 0.015 14.8 0.5 0.4 10.2 0.5 2.3 1 1 0 1 1 1 0 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 ORF67688 - 0.022 14.8 0.5 0.034 14.2 0.5 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Auto_anti-p27 PF06677.12 ORF6694 - 0.033 14.4 0.2 0.067 13.4 0.2 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) HAD_2 PF13419.6 ORF66128 - 1.3e-10 41.7 0.0 1.6e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF66128 - 1.2e-09 38.8 0.0 1.3e-09 38.6 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Integrase_Zn PF02022.19 ORF65604 - 5.7e-07 29.4 0.9 0.045 13.7 0.1 2.6 2 0 0 2 2 2 2 Integrase Zinc binding domain YceD PF02620.17 ORF65014 - 0.01 15.9 0.2 0.014 15.5 0.2 1.3 1 0 0 1 1 1 0 Large ribosomal RNA subunit accumulation protein YceD Granulin PF00396.18 ORF60693 - 1.7 9.0 8.6 1.6 9.1 0.7 3.3 2 1 1 3 3 3 0 Granulin Aa_trans PF01490.18 ORF60464 - 4.9e-30 104.5 17.4 6e-30 104.3 17.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Jagunal PF07086.12 ORF60464 - 0.12 12.4 4.1 0.5 10.4 1.9 2.3 2 1 0 2 2 2 0 Jagunal, ER re-organisation during oogenesis MyTH4 PF00784.17 ORF59818 - 0.053 14.0 17.1 1.7 9.2 0.1 4.6 5 0 0 5 5 5 0 MyTH4 domain Formyl_trans_N PF00551.19 ORF59238 - 1.8e-43 148.4 0.0 2e-43 148.2 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase c-SKI_SMAD_bind PF08782.10 ORF57406 - 0.098 12.9 3.7 0.18 12.0 2.4 2.0 2 0 0 2 2 2 0 c-SKI Smad4 binding domain Ank_2 PF12796.7 ORF54329 - 9.3e-07 29.4 0.0 1.4e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF54329 - 1.2e-06 28.7 0.0 2.9e-06 27.4 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF54329 - 6.4e-05 23.4 0.0 0.00024 21.6 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF54329 - 0.0017 18.7 0.0 0.0049 17.3 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeat Astro_capsid_p PF12226.8 ORF54329 - 0.011 14.9 0.6 0.014 14.5 0.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Ank_3 PF13606.6 ORF54329 - 0.017 15.6 0.0 0.13 12.9 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeat KleE PF17394.2 ORF52131 - 0.011 15.9 0.3 0.4 10.9 0.1 2.6 3 0 0 3 3 3 0 Uncharacterized KleE stable inheritance protein AAA_33 PF13671.6 ORF51319 - 2.5e-12 47.1 0.3 1.2e-11 44.9 0.3 1.9 1 1 1 2 2 2 1 AAA domain UBA PF00627.31 ORF51319 - 0.00057 19.7 2.2 0.0011 18.8 0.2 2.5 3 0 0 3 3 3 1 UBA/TS-N domain Peptidase_M44 PF03410.13 ORF51254 - 0.00097 17.8 0.5 0.0013 17.5 0.5 1.2 1 0 0 1 1 1 1 Metallopeptidase from vaccinia pox DSBA PF01323.20 ORF51254 - 0.13 12.0 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain TPR_12 PF13424.6 ORF5109 - 0.00077 19.7 0.1 0.0013 19.0 0.1 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF5109 - 0.0012 18.6 0.8 0.0022 17.7 0.8 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF5109 - 0.0048 16.9 0.3 0.0094 16.0 0.3 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat Poxvirus_B22R_N PF13169.6 ORF5109 - 0.064 13.7 9.2 0.033 14.7 5.6 2.3 2 1 0 2 2 2 0 Poxvirus B22R protein N-terminal TPR_8 PF13181.6 ORF5109 - 0.12 12.7 0.7 0.12 12.7 0.7 2.2 3 0 0 3 3 3 0 Tetratricopeptide repeat MIT PF04212.18 ORF5109 - 1.8 8.7 7.2 0.54 10.4 3.2 2.3 2 1 0 2 2 2 0 MIT (microtubule interacting and transport) domain TRP PF06011.12 ORF47868 - 2.5e-07 29.8 20.2 2.4e-06 26.6 20.0 1.9 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel LST1 PF05083.13 ORF47868 - 2.8 8.3 5.9 1.2 9.5 0.1 2.8 3 0 0 3 3 3 0 LST-1 protein TRIQK PF15168.6 ORF47868 - 3.6 7.5 8.2 5.1 7.1 0.2 3.4 2 1 1 3 3 3 0 Triple QxxK/R motif-containing protein family Serglycin PF04360.12 ORF428 - 9.3 6.2 8.6 17 5.4 8.3 1.5 1 1 0 1 1 1 0 Serglycin YceD PF02620.17 ORF42756 - 0.01 15.9 0.2 0.014 15.5 0.2 1.3 1 0 0 1 1 1 0 Large ribosomal RNA subunit accumulation protein YceD DUF4096 PF13340.6 ORF39246 - 0.096 12.9 1.0 0.32 11.2 1.0 2.0 1 1 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) Granulin PF00396.18 ORF38275 - 1.7 9.0 8.6 1.6 9.1 0.7 3.3 2 1 1 3 3 3 0 Granulin DUF3301 PF11743.8 ORF3767 - 0.13 12.0 0.6 0.24 11.1 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) DHFR_2 PF06442.11 ORF36908 - 0.00057 19.7 0.1 0.00097 18.9 0.1 1.3 1 0 0 1 1 1 1 R67 dihydrofolate reductase Ras PF00071.22 ORF34776 - 1.9e-57 193.4 0.2 2.3e-57 193.1 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF34776 - 2.4e-33 114.9 0.0 3.6e-33 114.3 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF34776 - 8.3e-17 61.2 0.0 1e-16 60.9 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF34776 - 1.3e-07 31.7 0.0 0.0062 16.5 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 ORF34776 - 3.7e-07 29.7 0.1 4.3e-07 29.5 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF34776 - 5.3e-06 26.5 0.0 8.1e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF34776 - 0.0026 17.2 0.0 0.0068 15.9 0.0 1.8 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_24 PF13479.6 ORF34776 - 0.0065 16.2 0.0 0.16 11.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 ORF34776 - 0.019 15.2 0.0 0.043 14.1 0.0 1.8 1 1 1 2 2 2 0 AAA domain PduV-EutP PF10662.9 ORF34776 - 0.03 14.1 0.1 0.057 13.2 0.1 1.8 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 ORF34776 - 0.03 13.8 0.0 0.23 11.0 0.0 1.9 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA_16 PF13191.6 ORF34776 - 0.076 13.4 0.0 0.18 12.1 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 ORF34776 - 0.094 13.2 0.0 3.1 8.3 0.0 2.2 2 0 0 2 2 2 0 ABC transporter DUF2000 PF09391.10 ORF34776 - 0.11 12.4 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2000) AAA_5 PF07728.14 ORF34776 - 0.16 11.9 0.0 0.39 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TolA_bind_tri PF16331.5 ORF28425 - 0.018 15.1 8.1 0.074 13.1 1.6 2.6 2 0 0 2 2 2 0 TolA binding protein trimerisation Spc7 PF08317.11 ORF28425 - 0.02 13.8 14.1 0.028 13.3 14.1 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Occludin_ELL PF07303.13 ORF28425 - 0.063 14.0 10.9 0.2 12.4 5.7 2.5 1 1 1 2 2 2 0 Occludin homology domain CCDC24 PF15669.5 ORF28425 - 0.14 12.0 12.3 0.011 15.6 3.4 2.6 2 1 1 3 3 3 0 Coiled-coil domain-containing protein 24 family SpecificRecomb PF10136.9 ORF28425 - 0.38 9.0 2.4 0.47 8.7 2.4 1.1 1 0 0 1 1 1 0 Site-specific recombinase APC_N_CC PF16689.5 ORF28425 - 0.5 10.5 14.4 3.1 7.9 4.0 3.1 2 0 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain YabA PF06156.13 ORF28425 - 0.71 10.6 18.5 2.4 8.8 0.3 3.0 1 1 2 3 3 3 0 Initiation control protein YabA Cep57_CLD_2 PF14197.6 ORF28425 - 1.4 9.0 13.5 6.3 7.0 9.4 3.1 1 1 2 3 3 3 0 Centrosome localisation domain of PPC89 DUF1664 PF07889.12 ORF28425 - 1.5 8.9 6.1 3.8 7.6 6.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Uso1_p115_C PF04871.13 ORF28425 - 2.9 8.3 18.3 1.2 9.5 11.1 2.9 1 1 2 3 3 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region H-kinase_dim PF02895.14 ORF28425 - 3.3 8.2 6.3 27 5.2 6.3 2.5 1 1 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain GDNF PF02351.16 ORF28425 - 4 8.5 8.2 0.76 10.8 0.4 2.7 1 1 0 2 2 2 0 GDNF/GAS1 domain TMPIT PF07851.13 ORF28425 - 4.1 6.5 17.5 0.19 10.9 11.9 1.6 2 0 0 2 2 2 0 TMPIT-like protein DUF5320 PF17253.2 ORF28425 - 6.3 7.9 10.8 5.7 8.1 0.3 3.0 1 1 2 3 3 3 0 Family of unknown function (DUF5320) CoA_binding_3 PF13727.6 ORF27712 - 2.9 7.9 6.6 0.6 10.1 0.6 2.3 2 0 0 2 2 2 0 CoA-binding domain Golgin_A5 PF09787.9 ORF25242 - 0.0046 16.5 8.8 0.006 16.1 8.8 1.3 1 0 0 1 1 1 1 Golgin subfamily A member 5 H-kinase_dim PF02895.14 ORF25242 - 0.0083 16.5 4.2 0.5 10.8 0.7 2.2 2 0 0 2 2 2 1 Signal transducing histidine kinase, homodimeric domain HMMR_N PF15905.5 ORF25242 - 0.02 14.4 16.9 0.036 13.5 16.8 1.5 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal RbsD_FucU PF05025.13 ORF25242 - 0.03 14.7 1.2 0.069 13.6 1.1 1.7 1 1 1 2 2 2 0 RbsD / FucU transport protein family TolA_bind_tri PF16331.5 ORF25242 - 0.046 13.8 5.6 0.25 11.4 2.4 2.9 2 1 1 3 3 3 0 TolA binding protein trimerisation Utp11 PF03998.13 ORF25242 - 0.047 13.6 6.8 0.052 13.5 6.8 1.2 1 0 0 1 1 1 0 Utp11 protein UPF0242 PF06785.11 ORF25242 - 0.082 13.0 15.8 3.4 7.7 12.7 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF25242 - 0.085 12.2 4.4 0.094 12.1 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 ORF25242 - 0.091 12.5 7.5 0.16 11.8 0.1 3.1 2 1 1 3 3 3 0 Septum formation initiator ATG16 PF08614.11 ORF25242 - 0.15 12.3 11.0 0.041 14.1 4.5 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) COG2 PF06148.11 ORF25242 - 0.15 12.1 4.9 0.24 11.5 2.5 2.2 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Nup54 PF13874.6 ORF25242 - 0.38 10.9 5.8 0.55 10.3 5.1 1.6 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 LPP PF04728.13 ORF25242 - 0.52 10.7 6.0 2.1 8.8 0.0 3.6 3 1 1 4 4 4 0 Lipoprotein leucine-zipper DUF641 PF04859.12 ORF25242 - 0.88 9.9 8.2 0.13 12.6 2.6 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Exonuc_VII_L PF02601.15 ORF25242 - 0.95 9.0 5.9 1.2 8.7 5.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit CENP-F_leu_zip PF10473.9 ORF25242 - 1.1 9.3 16.2 0.24 11.4 6.6 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YabA PF06156.13 ORF25242 - 1.1 9.9 11.9 0.63 10.7 3.1 2.3 1 1 0 2 2 2 0 Initiation control protein YabA TSC22 PF01166.18 ORF25242 - 1.4 9.3 6.7 3.1 8.2 0.0 3.2 2 1 1 3 3 3 0 TSC-22/dip/bun family Jnk-SapK_ap_N PF09744.9 ORF25242 - 1.5 9.0 14.6 9.9 6.4 3.5 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Med4 PF10018.9 ORF25242 - 1.6 8.4 9.6 0.81 9.3 5.8 2.1 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 NPV_P10 PF05531.12 ORF25242 - 1.8 9.1 6.7 3.2 8.3 1.1 2.9 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF3450 PF11932.8 ORF25242 - 1.8 7.8 9.8 0.25 10.6 2.9 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) FliD_N PF02465.18 ORF25242 - 2.1 9.1 9.8 3.7 8.3 1.1 2.4 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Syntaxin-6_N PF09177.11 ORF25242 - 2.1 9.0 7.4 7.8 7.1 0.8 2.3 2 0 0 2 2 2 0 Syntaxin 6, N-terminal BST2 PF16716.5 ORF25242 - 2.2 8.9 14.3 0.26 11.9 5.1 2.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF1664 PF07889.12 ORF25242 - 2.9 7.9 6.6 1.5 8.8 2.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF25242 - 2.9 8.2 11.0 6.6 7.1 10.5 1.7 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) bZIP_1 PF00170.21 ORF25242 - 4.6 7.4 12.0 2.7 8.2 0.1 3.3 2 1 1 3 3 3 0 bZIP transcription factor DUF3668 PF12416.8 ORF17556 - 0.24 11.2 0.0 0.35 10.7 0.0 1.1 1 0 0 1 1 1 0 Cep120 protein TMEM135_C_rich PF15982.5 ORF17036 - 0.0031 18.1 0.5 0.0031 18.1 0.5 1.6 2 0 0 2 2 2 1 N-terminal cysteine-rich region of Transmembrane protein 135 ARL2_Bind_BART PF11527.8 ORF15354 - 3.2e-25 88.5 10.1 4.9e-25 87.9 10.1 1.3 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART Fes1 PF08609.10 ORF15354 - 0.58 11.1 3.5 5.2 8.0 0.2 2.5 2 0 0 2 2 2 0 Nucleotide exchange factor Fes1 DnaJ PF00226.31 ORF149286 - 3.7e-06 27.0 0.1 7.9e-06 25.9 0.1 1.6 1 1 0 1 1 1 1 DnaJ domain SipA_VBS PF17985.1 ORF148659 - 0.15 12.0 0.1 0.27 11.2 0.1 1.3 1 0 0 1 1 1 0 SipA vinculin binding site SPRY PF00622.28 ORF148073 - 0.02 15.0 0.0 0.028 14.5 0.0 1.2 1 0 0 1 1 1 0 SPRY domain DUF4284 PF14112.6 ORF148000 - 0.15 13.0 5.0 0.34 11.8 5.0 1.7 1 1 0 1 1 1 0 Immunity protein 22 Thioredoxin PF00085.20 ORF147231 - 0.00014 21.8 0.0 0.24 11.4 0.0 2.2 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.6 ORF147231 - 0.0058 17.1 0.0 0.032 14.7 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain MdoG PF04349.12 ORF147070 - 9.5e-55 186.4 0.0 1.1e-54 186.2 0.0 1.0 1 0 0 1 1 1 1 Periplasmic glucan biosynthesis protein, MdoG EpoR_lig-bind PF09067.10 ORF147070 - 0.0084 16.3 0.0 0.015 15.5 0.0 1.3 1 0 0 1 1 1 1 Erythropoietin receptor, ligand binding BTB PF00651.31 ORF146566 - 1.1e-17 64.3 2.6 2.6e-16 59.8 0.1 2.6 1 1 1 2 2 2 2 BTB/POZ domain BACK PF07707.15 ORF146566 - 0.0039 17.3 0.6 0.017 15.2 0.1 2.1 2 0 0 2 2 2 1 BTB And C-terminal Kelch Serglycin PF04360.12 ORF145429 - 9.3 6.2 8.6 17 5.4 8.3 1.5 1 1 0 1 1 1 0 Serglycin Cyt_c_ox_IV PF12270.8 ORF144284 - 0.076 13.2 0.1 0.076 13.2 0.1 1.9 2 1 0 2 2 2 0 Cytochrome c oxidase subunit IV PRT_C PF08372.10 ORF144284 - 3.8 7.3 6.7 1.8 8.3 3.8 1.8 2 0 0 2 2 2 0 Plant phosphoribosyltransferase C-terminal CKS PF01111.19 ORF144226 - 0.013 15.8 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit DUF2070 PF09843.9 ORF143184 - 4.2 5.6 22.4 5 5.3 22.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) CAC1F_C PF16885.5 ORF142830 - 9.7 5.7 14.7 12 5.5 14.7 1.0 1 0 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term SRP_SPB PF02978.19 ORF136353 - 1.7e-30 105.6 2.0 1.7e-30 105.6 2.0 3.0 2 1 0 2 2 2 1 Signal peptide binding domain DcrB PF08786.11 ORF136242 - 2.9e-30 105.0 1.6 3.9e-30 104.6 1.6 1.1 1 0 0 1 1 1 1 DcrB DUF1454 PF07305.12 ORF136242 - 0.0046 16.4 0.1 0.0057 16.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1454) PRODH PF18327.1 ORF136242 - 0.13 12.5 0.4 0.31 11.3 0.4 1.7 1 0 0 1 1 1 0 Proline utilization A proline dehydrogenase N-terminal domain DUF1345 PF07077.11 ORF13446 - 0.0058 16.3 1.4 0.011 15.4 1.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1345) Ras PF00071.22 ORF134120 - 2.3e-50 170.4 0.0 2.7e-50 170.1 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF134120 - 7.2e-21 74.6 0.0 1.6e-20 73.5 0.0 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF134120 - 2.9e-09 36.6 0.0 3.5e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Pro_isomerase PF00160.21 ORF129442 - 2.2e-41 141.8 0.3 2.6e-41 141.5 0.3 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HD_2 PF12917.7 ORF129088 - 3.2e-77 258.4 1.4 3.6e-77 258.2 1.4 1.0 1 0 0 1 1 1 1 HD containing hydrolase-like enzyme HD_3 PF13023.6 ORF129088 - 7.7e-17 61.7 0.5 9.7e-17 61.4 0.5 1.2 1 0 0 1 1 1 1 HD domain HD PF01966.22 ORF129088 - 2e-07 31.3 0.2 2.5e-07 30.9 0.2 1.2 1 0 0 1 1 1 1 HD domain HDOD PF08668.12 ORF129088 - 0.056 12.9 0.0 0.08 12.4 0.0 1.2 1 0 0 1 1 1 0 HDOD domain KKLCAg1 PF15204.6 ORF122763 - 0.1 12.7 0.0 0.24 11.5 0.0 1.6 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 MyTH4 PF00784.17 ORF122492 - 0.053 14.0 17.1 1.7 9.2 0.1 4.6 5 0 0 5 5 5 0 MyTH4 domain DUF2254 PF10011.9 ORF121410 - 0.046 12.6 0.1 0.053 12.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Inhibitor_I78 PF11720.8 ORF117725 - 0.03 14.4 0.0 0.079 13.0 0.0 1.7 1 0 0 1 1 1 0 Peptidase inhibitor I78 family Serglycin PF04360.12 ORF116873 - 9.3 6.2 8.6 17 5.4 8.3 1.5 1 1 0 1 1 1 0 Serglycin SASRP1 PF15160.6 ORF116609 - 0.17 11.6 0.1 0.17 11.6 0.1 1.5 2 0 0 2 2 2 0 Spermatogenesis-associated serine-rich protein 1 Mac_assoc PF16628.5 ORF115135 - 0.028 14.6 0.5 0.044 14.0 0.4 1.3 1 1 0 1 1 1 0 Unstructured region on maltose acetyltransferase Serglycin PF04360.12 ORF113752 - 9.3 6.2 8.6 17 5.4 8.3 1.5 1 1 0 1 1 1 0 Serglycin Med19 PF10278.9 ORF113295 - 0.031 14.2 1.2 0.05 13.5 0.2 1.8 1 1 0 2 2 2 0 Mediator of RNA pol II transcription subunit 19 FlgT_M PF16539.5 ORF113295 - 1.2 9.2 5.7 1.3 9.1 1.0 2.1 1 1 1 2 2 2 0 Flagellar assembly protein T, middle domain DUF5320 PF17253.2 ORF112422 - 1.7 9.8 9.2 3 9.0 9.2 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5320) Arf PF00025.21 ORF111816 - 3.9e-46 156.7 0.0 4.8e-46 156.4 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family G-alpha PF00503.20 ORF111816 - 1.1e-12 47.8 0.3 4.4e-09 36.0 0.0 2.5 1 1 1 2 2 2 2 G-protein alpha subunit Roc PF08477.13 ORF111816 - 7.2e-12 45.6 0.0 1.4e-11 44.7 0.0 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF111816 - 2.5e-11 43.6 0.0 3.7e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 ORF111816 - 7e-11 42.0 0.0 9.3e-11 41.6 0.0 1.2 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF111816 - 2.1e-07 30.5 0.0 3.2e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF111816 - 4.1e-07 29.6 0.0 5.2e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF111816 - 7.6e-05 22.3 0.0 0.0059 16.2 0.0 2.2 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AAA_18 PF13238.6 ORF111816 - 0.0017 18.9 0.1 0.0035 17.9 0.1 1.7 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 ORF111816 - 0.0018 18.2 0.0 0.0031 17.4 0.0 1.5 1 1 0 1 1 1 1 NACHT domain AAA_22 PF13401.6 ORF111816 - 0.002 18.4 0.1 0.021 15.1 0.1 2.1 1 1 0 1 1 1 1 AAA domain cobW PF02492.19 ORF111816 - 0.0036 16.9 0.4 1.3 8.6 0.0 2.3 1 1 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain TniB PF05621.11 ORF111816 - 0.008 15.6 0.1 0.12 11.8 0.0 2.2 2 0 0 2 2 2 1 Bacterial TniB protein FeoB_N PF02421.18 ORF111816 - 0.012 15.2 0.2 0.078 12.5 0.2 2.2 1 1 0 1 1 1 0 Ferrous iron transport protein B MobB PF03205.14 ORF111816 - 0.021 14.7 0.1 0.067 13.1 0.1 1.8 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.6 ORF111816 - 0.091 13.1 0.0 2.9 8.2 0.0 2.1 1 1 0 1 1 1 0 AAA ATPase domain Inhibitor_I78 PF11720.8 ORF111650 - 0.03 14.4 0.0 0.079 13.0 0.0 1.7 1 0 0 1 1 1 0 Peptidase inhibitor I78 family DPCD PF14913.6 ORF108734 - 5.7e-66 221.5 2.1 7.5e-66 221.1 2.1 1.0 1 0 0 1 1 1 1 DPCD protein family TRP PF06011.12 ORF104198 - 4.2e-05 22.5 5.3 6.2e-05 21.9 5.3 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Shisa PF13908.6 ORF104198 - 0.0033 17.7 0.3 0.0033 17.7 0.3 1.5 2 0 0 2 2 2 1 Wnt and FGF inhibitory regulator Chordopox_A33R PF05966.12 ORF104198 - 0.0086 15.4 1.4 0.013 14.8 1.4 1.3 1 0 0 1 1 1 1 Chordopoxvirus A33R protein DUF1870 PF08965.10 ORF104198 - 0.0095 16.0 0.8 0.12 12.4 0.2 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1870) ISK_Channel PF02060.15 ORF104198 - 2.3 7.9 7.6 0.53 10.0 0.2 2.5 2 1 0 2 2 2 0 Slow voltage-gated potassium channel PTS_2-RNA PF01885.16 ORF103488 - 3.4e-38 131.5 0.0 4.3e-38 131.2 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PARP PF00644.20 ORF103488 - 0.031 13.9 0.0 0.046 13.3 0.0 1.3 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain DUF2358 PF10184.9 ORF101696 - 1.4e-07 31.7 0.0 2.1e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2358) FPL PF09758.9 ORF100537 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised conserved protein SR-25 PF10500.9 NODE_36248_length_592_cov_101.019749_g29120_i0reverse_frame_1 - 0.1 12.2 5.7 0.13 11.8 5.7 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein VPDSG-CTERM PF18205.1 NODE_36232_length_592_cov_266.615799_g29106_i0forward_frame_1 - 8 6.4 6.5 7.8 6.4 0.5 2.7 2 0 0 2 2 2 0 VPDSG-CTERM motif LRR_4 PF12799.7 NODE_36226_length_592_cov_735.213645_g29101_i0reverse_frame_1 - 0.0019 18.5 6.5 1.5 9.4 0.7 4.4 2 1 2 4 4 4 2 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 NODE_36226_length_592_cov_735.213645_g29101_i0reverse_frame_1 - 0.0027 17.6 2.2 0.98 9.6 0.3 4.4 4 1 0 4 4 4 1 Leucine Rich repeat ER_lumen_recept PF00810.18 NODE_36224_length_592_cov_1093.833034_g29100_i0reverse_frame_1 - 0.014 16.2 4.7 0.02 15.7 4.7 1.3 1 0 0 1 1 1 0 ER lumen protein retaining receptor EF-hand_2 PF09068.11 NODE_36215_length_593_cov_2.498208_g29091_i0forward_frame_1 - 0.0052 16.9 0.7 0.013 15.7 0.3 1.7 1 1 1 2 2 2 1 EF hand DUF1638 PF07796.11 NODE_36212_length_593_cov_2.928315_g29088_i0forward_frame_1 - 0.05 13.7 0.3 0.066 13.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1638) RPS31 PF17067.5 NODE_36169_length_594_cov_2.633274_g29050_i0forward_frame_1 - 0.19 11.9 1.3 0.4 10.9 1.3 1.5 1 0 0 1 1 1 0 Ribosomal protein S31e S1 PF00575.23 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 3.7e-41 139.3 6.3 5.8e-21 74.6 0.7 2.1 2 0 0 2 2 2 2 S1 RNA binding domain DUF1344 PF07076.11 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.00027 20.8 2.9 0.1 12.6 0.2 3.9 3 1 0 3 3 3 1 Protein of unknown function (DUF1344) S1_2 PF13509.6 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.025 14.6 0.4 3 8.0 0.1 3.0 2 2 0 2 2 2 0 S1 domain PCB_OB PF17092.5 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.028 15.2 4.8 0.7 10.7 0.4 3.4 1 1 3 4 4 4 0 Penicillin-binding protein OB-like domain BPL_C PF02237.17 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.04 13.8 5.0 11 6.1 0.0 3.5 3 0 0 3 3 3 0 Biotin protein ligase C terminal domain CusF_Ec PF11604.8 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 0.16 12.0 3.7 15 5.7 0.4 4.0 2 1 1 3 3 3 0 Copper binding periplasmic protein CusF RNA_pol_Rbc25 PF08292.12 NODE_36124_length_595_cov_3.496429_g29009_i0forward_frame_2 - 3.6 7.8 5.0 52 4.1 0.0 3.2 3 1 0 3 3 3 0 RNA polymerase III subunit Rpc25 Transformer PF06495.11 NODE_36119_length_595_cov_75.789286_g29005_i0reverse_frame_2 - 0.11 12.6 4.4 0.16 12.0 4.4 1.3 1 0 0 1 1 1 0 Fruit fly transformer protein DUF4798 PF16055.5 NODE_36119_length_595_cov_75.789286_g29005_i0forward_frame_2 - 1.4 9.2 3.4 1.2 9.4 2.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4798) baeRF_family10 PF18854.1 NODE_36105_length_595_cov_255.096429_g28992_i0reverse_frame_3 - 0.23 11.7 2.0 8.2 6.7 0.0 2.3 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 10 DUF1375 PF07119.12 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_2 - 0.00015 22.1 9.4 3.1 8.3 0.1 4.2 2 1 2 4 4 4 3 Protein of unknown function (DUF1375) Fucose_iso_N1 PF07881.12 NODE_36096_length_595_cov_462.928571_g28983_i0reverse_frame_2 - 0.0056 16.6 0.0 3.3 7.5 0.0 2.1 2 0 0 2 2 2 2 L-fucose isomerase, first N-terminal domain MyTH4 PF00784.17 NODE_36096_length_595_cov_462.928571_g28983_i0forward_frame_3 - 0.11 13.0 8.8 6.7 7.3 0.2 3.9 3 1 1 4 4 4 0 MyTH4 domain TnpW PF14202.6 NODE_36096_length_595_cov_462.928571_g28983_i0forward_frame_3 - 0.14 12.0 0.1 60 3.6 0.0 3.1 3 0 0 3 3 3 0 Transposon-encoded protein TnpW NERD PF08378.11 NODE_36089_length_595_cov_1427.094643_g28977_i0reverse_frame_3 - 0.015 15.8 0.9 0.015 15.8 0.9 1.7 2 0 0 2 2 2 0 Nuclease-related domain POLO_box PF00659.18 NODE_36082_length_596_cov_2.172906_g28971_i0reverse_frame_3 - 2.3e-08 34.1 0.1 4.4e-08 33.2 0.1 1.5 1 0 0 1 1 1 1 POLO box duplicated region POLO_box PF00659.18 NODE_36082_length_596_cov_2.172906_g28971_i0reverse_frame_2 - 2.5e-17 62.8 0.3 4.9e-17 61.9 0.3 1.5 1 0 0 1 1 1 1 POLO box duplicated region Ank PF00023.30 NODE_36064_length_596_cov_84.299465_g28953_i0reverse_frame_2 - 8.7e-09 35.4 0.0 1.7e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat Ank_4 PF13637.6 NODE_36064_length_596_cov_84.299465_g28953_i0reverse_frame_2 - 4e-08 33.6 0.0 6.5e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_36064_length_596_cov_84.299465_g28953_i0reverse_frame_2 - 8.2e-08 32.7 0.0 1.5e-07 31.9 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_36064_length_596_cov_84.299465_g28953_i0reverse_frame_2 - 4e-07 30.2 0.0 8.2e-07 29.2 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_36064_length_596_cov_84.299465_g28953_i0reverse_frame_2 - 5.4e-05 23.3 0.0 0.00012 22.2 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeat GOLGA2L5 PF15070.6 NODE_36061_length_596_cov_89.008913_g28950_i0forward_frame_3 - 0.0017 17.1 1.0 0.0021 16.8 1.0 1.1 1 0 0 1 1 1 1 Putative golgin subfamily A member 2-like protein 5 ZapB PF06005.12 NODE_36061_length_596_cov_89.008913_g28950_i0forward_frame_3 - 0.049 14.1 8.2 0.092 13.2 8.2 1.4 1 0 0 1 1 1 0 Cell division protein ZapB YabA PF06156.13 NODE_36061_length_596_cov_89.008913_g28950_i0forward_frame_3 - 0.085 13.5 0.2 0.14 12.8 0.2 1.4 1 0 0 1 1 1 0 Initiation control protein YabA Exostosin PF03016.15 NODE_36060_length_596_cov_91.019608_g28949_i0reverse_frame_3 - 3.4e-09 36.3 0.0 5.3e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 Exostosin family Exostosin PF03016.15 NODE_36060_length_596_cov_91.019608_g28949_i0reverse_frame_2 - 1.2e-05 24.7 0.0 1.5e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Exostosin family amfpi-1 PF12190.8 NODE_36060_length_596_cov_91.019608_g28949_i0forward_frame_2 - 0.094 13.3 1.5 0.23 12.1 1.5 1.8 1 1 0 1 1 1 0 Fungal protease inhibitor Fis1_TPR_C PF14853.6 NODE_36043_length_596_cov_173.657754_g28932_i0reverse_frame_3 - 0.0011 19.0 0.0 0.0019 18.2 0.0 1.2 1 0 0 1 1 1 1 Fis1 C-terminal tetratricopeptide repeat Mito_fiss_reg PF05308.11 NODE_36043_length_596_cov_173.657754_g28932_i0reverse_frame_3 - 2.7 8.0 9.3 0.24 11.5 3.0 2.0 2 0 0 2 2 2 0 Mitochondrial fission regulator KBP_C PF12309.8 NODE_36042_length_596_cov_186.716578_g28931_i0reverse_frame_3 - 8e-27 94.7 3.1 9.9e-27 94.4 3.1 1.0 1 0 0 1 1 1 1 KIF-1 binding protein C terminal Clr5 PF14420.6 NODE_36042_length_596_cov_186.716578_g28931_i0reverse_frame_3 - 0.0086 16.3 0.4 0.061 13.6 0.1 2.2 2 0 0 2 2 2 1 Clr5 domain SPO11_like PF03533.14 NODE_36036_length_596_cov_280.729055_g28925_i0forward_frame_3 - 0.0054 16.8 0.1 0.016 15.3 0.1 1.8 1 0 0 1 1 1 1 SPO11 homologue CTD_bind PF04818.13 NODE_36011_length_597_cov_93.362989_g28904_i0reverse_frame_2 - 1.9e-06 28.6 0.1 5.4e-06 27.1 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase II-binding domain. IlvC PF01450.19 NODE_36006_length_597_cov_151.306050_g28901_i0forward_frame_3 - 0.059 13.7 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain RRM_1 PF00076.22 NODE_35999_length_597_cov_246.112100_g28895_i0reverse_frame_2 - 1.3e-17 63.4 0.0 1.9e-17 62.8 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 NODE_35999_length_597_cov_246.112100_g28895_i0reverse_frame_2 - 0.0097 15.7 0.0 0.024 14.5 0.0 1.6 1 1 0 1 1 1 1 Occluded RNA-recognition motif CDC45 PF02724.14 NODE_35999_length_597_cov_246.112100_g28895_i0reverse_frame_2 - 6.7 4.9 20.3 7.9 4.6 20.3 1.0 1 0 0 1 1 1 0 CDC45-like protein Herpes_UL56 PF04534.12 NODE_35996_length_597_cov_386.069395_g28892_i0forward_frame_3 - 4.7 6.7 13.5 1.6 8.2 11.0 1.5 1 1 0 1 1 1 0 Herpesvirus UL56 protein DUF4633 PF15464.6 NODE_35996_length_597_cov_386.069395_g28892_i0forward_frame_2 - 0.25 11.5 5.1 0.15 12.2 1.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4633) COX8 PF02285.15 NODE_35992_length_597_cov_768.886121_g28888_i0forward_frame_3 - 1.3 9.0 36.4 5.1 7.1 0.5 8.1 4 2 2 7 7 7 0 Cytochrome oxidase c subunit VIII DUF1700 PF08006.11 NODE_35992_length_597_cov_768.886121_g28888_i0forward_frame_3 - 7.2 6.1 19.3 5.2 6.6 1.1 4.1 1 1 4 5 5 5 0 Protein of unknown function (DUF1700) Homeodomain PF00046.29 ORF98882 - 0.0022 17.8 0.1 0.0059 16.4 0.1 1.8 1 0 0 1 1 1 1 Homeodomain COLFI PF01410.18 ORF98882 - 0.021 14.1 3.0 0.15 11.3 0.1 2.1 2 0 0 2 2 2 0 Fibrillar collagen C-terminal domain DnaJ PF00226.31 ORF96332 - 3.3e-11 43.2 0.1 5.8e-11 42.4 0.1 1.3 1 0 0 1 1 1 1 DnaJ domain DASH_Spc19 PF08287.11 ORF96332 - 0.011 15.7 0.1 0.017 15.0 0.1 1.3 1 0 0 1 1 1 0 Spc19 MADF_DNA_bdg PF10545.9 ORF96332 - 0.022 15.1 0.9 0.046 14.0 0.9 1.6 1 1 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like NEMO PF11577.8 ORF96332 - 0.094 12.7 1.2 0.15 12.1 0.4 1.8 2 0 0 2 2 2 0 NF-kappa-B essential modulator NEMO MORN PF02493.20 ORF96278 - 6.4e-30 101.3 37.7 6.9e-06 25.7 0.1 8.3 8 0 0 8 8 8 8 MORN repeat Lipocalin_9 PF17186.4 ORF95359 - 0.033 14.5 1.2 0.063 13.6 1.2 1.5 1 0 0 1 1 1 0 Lipocalin-like domain Cyclin PF08613.11 ORF95220 - 6.7e-33 114.3 0.1 8.3e-33 114.0 0.1 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF95220 - 3.5e-11 43.0 0.1 4.9e-11 42.5 0.1 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain Rft-1 PF04506.13 ORF94820 - 5.5e-21 74.9 0.5 5.8e-21 74.8 0.5 1.0 1 0 0 1 1 1 1 Rft protein Polysacc_synt_C PF14667.6 ORF94820 - 0.0042 17.2 7.9 0.0071 16.4 7.9 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain LRR_4 PF12799.7 ORF94759 - 0.082 13.4 5.2 0.42 11.1 1.9 3.0 2 1 1 3 3 3 0 Leucine Rich repeats (2 copies) V-SNARE_C PF12352.8 ORF9460 - 8.2e-16 58.1 1.9 1.5e-15 57.2 1.9 1.5 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 ORF9460 - 0.0014 18.5 0.1 0.0025 17.7 0.1 1.4 1 1 0 1 1 1 1 Sec20 SNARE PF05739.19 ORF9460 - 1.8 8.6 7.1 0.35 10.9 2.4 2.3 2 1 1 3 3 3 0 SNARE domain zf-Di19 PF05605.12 ORF93954 - 0.0094 16.2 2.0 0.022 15.0 2.0 1.6 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding Orthoreo_P17 PF07272.11 ORF93954 - 0.098 12.7 1.2 0.14 12.2 1.2 1.2 1 0 0 1 1 1 0 Orthoreovirus P17 protein YyzF PF14116.6 ORF93954 - 0.14 12.2 0.6 0.72 9.9 0.0 2.2 2 0 0 2 2 2 0 YyzF-like protein zinc_ribbon_2 PF13240.6 ORF93954 - 0.18 11.6 0.1 0.18 11.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF93954 - 0.22 11.0 0.2 0.22 11.0 0.2 2.7 3 0 0 3 3 3 0 zinc-ribbon domain zf-CHCC PF10276.9 ORF93954 - 0.59 10.2 6.1 0.89 9.7 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger domain EF-hand_1 PF00036.32 ORF91314 - 6e-27 91.2 12.2 4.1e-07 29.1 0.2 4.4 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF91314 - 2.4e-23 82.3 11.3 1.3e-11 44.8 0.8 2.6 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF91314 - 1.5e-22 77.6 7.4 1.3e-06 27.8 0.1 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF91314 - 3.7e-20 70.5 10.2 9e-06 25.0 1.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF91314 - 2.9e-13 49.4 12.8 0.00022 21.0 0.3 4.4 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF91314 - 9.4e-11 42.0 2.7 2.5e-06 27.8 0.4 2.2 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF91314 - 0.0026 17.7 3.7 0.22 11.5 0.2 2.8 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF91314 - 0.072 13.4 0.0 2.5 8.5 0.0 2.6 2 1 0 2 2 2 0 EF-hand domain Caleosin PF05042.13 ORF91314 - 0.072 13.0 2.6 3.6 7.5 0.2 3.2 1 1 2 3 3 3 0 Caleosin related protein DUF4284 PF14112.6 ORF91314 - 0.12 13.3 3.1 0.13 13.2 1.6 1.7 1 1 1 2 2 2 0 Immunity protein 22 MethyTransf_Reg PF10119.9 ORF89984 - 0.13 13.0 0.2 1.3 9.8 0.0 2.3 2 0 0 2 2 2 0 Predicted methyltransferase regulatory domain Clat_adaptor_s PF01217.20 ORF89433 - 1.6e-17 63.7 2.8 2.1e-17 63.4 2.8 1.1 1 0 0 1 1 1 1 Clathrin adaptor complex small chain WD40 PF00400.32 ORF88646 - 7.3e-06 26.6 0.1 0.0025 18.6 0.0 3.2 3 0 0 3 3 3 2 WD domain, G-beta repeat DUF4903 PF16246.5 ORF87777 - 0.062 12.9 3.8 0.072 12.7 0.8 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4903) DNA_RNApol_7kD PF03604.13 ORF87444 - 0.14 11.9 0.6 0.14 11.9 0.6 2.2 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Asp PF00026.23 ORF86990 - 1.3e-52 179.2 0.0 1.4e-52 179.0 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF86990 - 2.6e-06 27.3 0.0 4e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal TetR_N PF00440.23 ORF86495 - 3.2e-09 36.4 0.0 5.5e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_15 PF17918.1 ORF86495 - 0.02 15.6 0.8 0.26 12.0 0.1 2.5 1 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TetR_C_16 PF17920.1 ORF86495 - 0.054 13.7 1.0 1 9.6 0.0 2.8 3 1 1 4 4 4 0 Tetracyclin repressor-like, C-terminal domain DUF390 PF04094.14 ORF86495 - 0.07 11.4 0.3 0.064 11.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) TetR_C_24 PF17932.1 ORF86495 - 0.1 12.9 0.8 0.14 12.4 0.1 1.5 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain MtrH PF02007.18 ORF86495 - 0.26 10.3 0.0 0.34 10.0 0.0 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase MtrH subunit FAM183 PF14886.6 ORF84455 - 0.058 14.1 0.0 0.12 13.1 0.0 1.5 1 0 0 1 1 1 0 FAM183A and FAM183B related Asp PF00026.23 ORF80591 - 0.00019 21.0 0.0 0.00024 20.6 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF80591 - 0.0093 15.8 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal CbiX PF01903.17 ORF80309 - 2.3 8.6 4.1 29 5.0 0.4 2.8 1 1 1 2 2 2 0 CbiX YrhC PF14143.6 ORF80309 - 9.1 6.5 6.1 31 4.8 0.2 2.9 1 1 2 3 3 3 0 YrhC-like protein NusG PF02357.19 ORF79974 - 1.6e-27 95.8 0.0 2.7e-27 95.1 0.0 1.4 1 0 0 1 1 1 1 Transcription termination factor nusG KOW PF00467.29 ORF79974 - 2e-08 33.9 0.2 6.8e-08 32.2 0.1 2.0 2 0 0 2 2 2 1 KOW motif CS PF04969.16 ORF79751 - 1.6e-07 32.2 0.1 3e-07 31.4 0.1 1.4 1 0 0 1 1 1 1 CS domain RRM_3 PF08777.11 ORF79751 - 0.12 12.4 0.9 0.32 11.1 0.4 1.9 2 0 0 2 2 2 0 RNA binding motif DUF4407 PF14362.6 ORF78761 - 4.3 6.6 5.5 9.5 5.5 5.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1987 PF09345.10 ORF78306 - 0.062 13.0 0.1 0.11 12.1 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) SopA PF13981.6 ORF78306 - 0.1 13.1 0.0 0.17 12.3 0.0 1.4 1 0 0 1 1 1 0 SopA-like central domain TOH_N PF12549.8 ORF76507 - 0.24 11.3 2.0 0.43 10.5 2.0 1.5 1 0 0 1 1 1 0 Tyrosine hydroxylase N terminal adh_short PF00106.25 ORF7602 - 1.1e-16 60.8 0.1 1.5e-16 60.5 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF7602 - 2.7e-11 43.5 0.0 3.4e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase CreA PF05981.12 ORF74711 - 9e-30 103.3 0.0 1.1e-29 103.1 0.0 1.2 1 0 0 1 1 1 1 CreA protein PI-PLC-Y PF00387.19 ORF74035 - 0.062 13.6 0.1 0.36 11.2 0.0 2.1 2 0 0 2 2 2 0 Phosphatidylinositol-specific phospholipase C, Y domain Ribosomal_L13 PF00572.18 ORF73089 - 3.8e-11 43.3 0.1 8.1e-10 39.0 0.0 2.5 2 1 0 2 2 2 1 Ribosomal protein L13 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks118.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks118.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks118.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks118.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:00:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MORN PF02493.20 ORF66013 - 3.8e-28 95.7 29.6 2.2e-08 33.5 1.1 5.2 5 0 0 5 5 5 4 MORN repeat DUF3471 PF11954.8 ORF66013 - 0.21 12.1 1.6 0.82 10.2 1.6 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3471) ID PF18543.1 ORF66013 - 0.3 11.1 1.5 25 5.0 0.0 3.8 5 0 0 5 5 5 0 Intracellular delivery domain ADH_zinc_N_2 PF13602.6 ORF63625 - 1.7e-10 42.1 0.0 2.7e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Pkinase PF00069.25 ORF62884 - 1.3e-44 152.6 0.0 1.5e-44 152.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62884 - 1.6e-17 63.6 0.0 2e-17 63.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF62884 - 3.8e-08 32.5 0.0 5.1e-08 32.1 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF62884 - 0.00015 21.2 0.0 0.00025 20.5 0.0 1.4 1 1 0 1 1 1 1 Kinase-like EcKinase PF02958.20 ORF62884 - 0.00084 18.7 1.1 0.0011 18.4 0.3 1.5 2 0 0 2 2 2 1 Ecdysteroid kinase APH PF01636.23 ORF62884 - 0.0058 16.6 0.2 0.01 15.8 0.2 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF62884 - 0.011 15.1 0.2 0.017 14.5 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 ORF62884 - 0.075 12.6 0.5 0.15 11.5 0.1 1.6 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL adh_short PF00106.25 ORF62528 - 2.4e-54 183.8 0.1 2.9e-54 183.5 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF62528 - 2.3e-40 138.6 0.0 3e-40 138.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF62528 - 2.4e-05 24.3 0.1 3.6e-05 23.8 0.1 1.3 1 0 0 1 1 1 1 KR domain DUF765 PF05570.11 ORF62353 - 2.4 8.4 0.0 2.4 8.4 0.0 3.1 3 0 0 3 3 3 0 Circovirus protein of unknown function (DUF765) GerD PF17898.1 ORF58081 - 0.03 14.3 3.3 0.069 13.1 3.3 1.5 1 0 0 1 1 1 0 Spore germination GerD central core domain Z1 PF10593.9 ORF58081 - 0.15 11.6 3.2 0.19 11.2 3.2 1.2 1 0 0 1 1 1 0 Z1 domain CitMHS PF03600.16 ORF56584 - 0.072 12.3 13.6 0.11 11.6 13.6 1.4 1 1 0 1 1 1 0 Citrate transporter CrgA PF06781.12 ORF56584 - 4.3 7.5 13.7 2.6 8.1 1.9 3.0 2 2 2 4 4 4 0 Cell division protein CrgA Fe-S_biosyn PF01521.20 ORF56316 - 1.3e-25 89.7 0.0 1.9e-25 89.2 0.0 1.2 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis AMMECR1 PF01871.17 ORF51755 - 4.1e-46 156.6 0.0 4.7e-46 156.4 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 TPR_12 PF13424.6 ORF48484 - 2.6e-10 40.5 0.1 3.8e-10 39.9 0.1 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF48484 - 2.3e-05 24.1 0.2 0.00012 21.8 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF48484 - 0.00038 21.0 2.0 0.004 17.9 0.1 2.7 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF48484 - 0.00038 20.4 1.1 0.0066 16.5 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF48484 - 0.02 14.7 0.0 0.071 13.0 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF48484 - 0.021 15.0 0.1 0.083 13.1 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF48484 - 0.027 15.0 0.1 0.11 13.1 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat PPR PF01535.20 ORF48484 - 0.033 14.4 1.4 1.8 9.0 0.0 3.1 3 0 0 3 3 3 0 PPR repeat TPR_16 PF13432.6 ORF48484 - 0.033 14.8 0.3 0.47 11.1 0.1 2.5 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF48484 - 0.16 12.7 1.1 0.55 11.0 0.0 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat Usp PF00582.26 ORF45686 - 2.2e-09 37.9 0.0 2.4e-05 24.8 0.0 2.3 2 0 0 2 2 2 2 Universal stress protein family DUF2016 PF09436.10 ORF45686 - 0.12 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) TRP PF06011.12 ORF41207 - 0.059 12.1 9.2 0.078 11.7 9.2 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF3328 PF11807.8 ORF41207 - 0.45 10.2 1.9 0.61 9.8 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3328) Bestrophin PF01062.21 ORF40586 - 1.3e-10 41.2 0.1 1.9e-10 40.6 0.1 1.3 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF572 PF04502.13 ORF37063 - 6.8e-05 22.6 5.3 8.6e-05 22.3 5.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) DUF5563 PF17718.1 ORF37063 - 0.027 14.0 4.5 0.15 11.6 4.5 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5563) BAF1_ABF1 PF04684.13 ORF37063 - 0.1 11.6 3.5 0.12 11.4 3.5 1.1 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor DUF1736 PF08409.11 ORF36178 - 0.017 15.1 5.1 0.049 13.6 5.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1736) Pkinase PF00069.25 ORF3365 - 1.7e-50 171.8 0.0 2.3e-50 171.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF3365 - 9.3e-27 93.9 0.0 1e-26 93.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF3365 - 0.00033 20.1 0.0 0.00044 19.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF3365 - 0.11 12.4 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF3365 - 0.13 11.9 0.1 0.17 11.5 0.1 1.3 1 0 0 1 1 1 0 RIO1 family ABC_tran PF00005.27 ORF26617 - 1.7e-35 122.5 0.0 2.3e-35 122.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF26617 - 1.3e-06 28.4 0.0 0.0058 16.5 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF26617 - 0.00054 19.6 0.1 0.0013 18.4 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF26617 - 0.0017 18.8 0.0 0.0022 18.4 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF26617 - 0.0021 18.0 0.0 0.0038 17.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 ORF26617 - 0.017 14.7 0.1 0.52 9.8 0.0 2.4 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 ORF26617 - 0.035 14.2 0.0 0.039 14.0 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF26617 - 0.047 14.2 0.5 0.074 13.6 0.5 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF26617 - 0.06 13.6 0.3 0.15 12.3 0.1 1.7 2 1 0 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF26617 - 0.091 12.9 0.1 0.38 10.9 0.1 1.8 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 ORF26617 - 0.1 12.5 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 NTPase AAA_30 PF13604.6 ORF26617 - 0.11 12.2 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain Cuticle_2 PF08184.11 ORF24094 - 0.0041 17.1 0.4 1.2 9.2 0.0 2.4 2 0 0 2 2 2 2 Cuticle protein 7 isoform family ATP-sulfurylase PF01747.17 ORF24094 - 0.056 12.9 0.0 0.087 12.3 0.0 1.2 1 0 0 1 1 1 0 ATP-sulfurylase OCRE PF17780.1 ORF24094 - 5.1 7.2 9.5 13 5.9 0.9 2.3 2 0 0 2 2 2 0 OCRE domain Mito_morph_reg PF14972.6 ORF2385 - 0.063 12.9 0.5 0.11 12.1 0.5 1.4 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator Mlf1IP PF10248.9 ORF20118 - 0.18 11.8 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 Myelodysplasia-myeloid leukemia factor 1-interacting protein AAA_25 PF13481.6 ORF18386 - 0.00025 20.7 0.0 0.00048 19.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 ORF18386 - 0.0035 17.3 0.0 0.0047 16.9 0.0 1.2 1 0 0 1 1 1 1 NACHT domain DNA_pol3_delta2 PF13177.6 ORF18386 - 0.0089 15.8 0.0 0.01 15.6 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit IstB_IS21 PF01695.17 ORF18386 - 0.037 13.7 1.0 0.43 10.3 0.2 2.0 1 1 1 2 2 2 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF18386 - 0.054 13.9 0.0 0.067 13.6 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain TIP49 PF06068.13 ORF18386 - 0.19 10.9 0.0 0.29 10.3 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain C2 PF00168.30 ORF16964 - 0.00029 21.1 0.0 0.0006 20.1 0.0 1.5 1 0 0 1 1 1 1 C2 domain Ferlin_C PF16165.5 ORF16964 - 0.05 13.5 0.0 0.066 13.2 0.0 1.2 1 0 0 1 1 1 0 Ferlin C-terminus DUF4302 PF14135.6 ORF16384 - 0.2 11.6 0.1 0.3 11.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4302) Herpes_capsid PF06112.11 ORF16285 - 3.1 7.8 5.0 5.5 7.0 5.0 1.4 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein adh_short PF00106.25 ORF152359 - 1.1e-16 60.8 0.1 1.5e-16 60.5 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF152359 - 2.7e-11 43.5 0.0 3.4e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Ras PF00071.22 ORF150526 - 9e-55 184.7 0.2 1.1e-54 184.5 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF150526 - 2.9e-30 105.0 0.0 4.1e-30 104.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF150526 - 3.5e-12 46.1 0.0 4.5e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF150526 - 3.8e-06 26.9 0.1 0.089 12.7 0.0 2.2 1 1 0 2 2 2 2 RsgA GTPase MMR_HSR1 PF01926.23 ORF150526 - 4.3e-05 23.6 0.0 6.6e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF150526 - 0.14 11.7 0.0 0.37 10.3 0.0 1.7 1 1 0 1 1 1 0 Ferrous iron transport protein B HECT PF00632.25 ORF150493 - 3.7e-70 236.8 0.4 4.1e-70 236.7 0.4 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Ras PF00071.22 ORF150021 - 1.7e-42 144.8 0.0 2e-42 144.5 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF150021 - 7.7e-21 74.5 0.0 1.1e-20 74.0 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF150021 - 3.3e-07 29.9 0.0 4.4e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF150021 - 1.1e-05 25.4 0.0 1.8e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF150021 - 0.00037 19.9 0.1 0.00089 18.7 0.1 1.6 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF150021 - 0.00042 20.3 0.1 0.38 10.7 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 ORF150021 - 0.011 16.1 0.0 0.019 15.4 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain DUF4917 PF16263.5 ORF150021 - 0.016 14.6 0.1 0.028 13.8 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4917) AAA_24 PF13479.6 ORF150021 - 0.027 14.2 0.2 0.046 13.5 0.2 1.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF150021 - 0.069 12.9 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 ORF150021 - 0.085 13.4 0.0 0.22 12.0 0.0 1.6 2 0 0 2 2 2 0 ABC transporter CPT PF07931.12 ORF150021 - 0.16 11.8 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein Insulin_TMD PF17870.1 ORF148910 - 0.29 11.2 0.3 0.29 11.2 0.3 3.4 4 0 0 4 4 4 0 Insulin receptor trans-membrane segment VPS28 PF03997.12 ORF148879 - 2.7e-28 98.9 1.1 3.2e-28 98.7 1.1 1.1 1 0 0 1 1 1 1 VPS28 protein HalX PF08663.10 ORF148879 - 0.00014 22.1 0.7 0.0048 17.2 0.0 2.4 2 0 0 2 2 2 1 HalX domain Mistic PF11458.8 ORF148879 - 0.015 15.2 0.1 0.08 12.9 0.0 2.1 2 1 0 2 2 2 0 Membrane-integrating protein Mistic SH2_2 PF14633.6 ORF148879 - 0.056 12.8 0.1 0.15 11.5 0.0 1.7 1 1 1 2 2 2 0 SH2 domain NUP50 PF08911.11 ORF14768 - 0.027 15.1 0.3 0.047 14.4 0.3 1.3 1 0 0 1 1 1 0 NUP50 (Nucleoporin 50 kDa) HEAT PF02985.22 ORF145116 - 0.17 12.2 1.7 0.78 10.2 0.1 2.9 3 0 0 3 3 3 0 HEAT repeat Ras PF00071.22 ORF144254 - 2.4e-47 160.5 0.2 3e-47 160.2 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF144254 - 5.3e-24 84.7 0.0 7.6e-24 84.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF144254 - 2.4e-06 27.1 0.0 3.1e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF144254 - 0.00018 21.5 0.1 0.19 11.7 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase DUF572 PF04502.13 ORF144193 - 6.8e-05 22.6 5.3 8.6e-05 22.3 5.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) DUF5563 PF17718.1 ORF144193 - 0.027 14.0 4.5 0.15 11.6 4.5 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5563) BAF1_ABF1 PF04684.13 ORF144193 - 0.1 11.6 3.5 0.12 11.4 3.5 1.1 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor DUF572 PF04502.13 ORF143640 - 6.8e-05 22.6 5.3 8.6e-05 22.3 5.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) DUF5563 PF17718.1 ORF143640 - 0.027 14.0 4.5 0.15 11.6 4.5 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5563) BAF1_ABF1 PF04684.13 ORF143640 - 0.1 11.6 3.5 0.12 11.4 3.5 1.1 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor Nab2p_Zf1 PF18260.1 ORF14130 - 0.079 12.9 2.7 0.11 12.5 0.6 2.0 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 Homeodomain PF00046.29 ORF138746 - 0.0022 17.8 0.1 0.0059 16.4 0.1 1.8 1 0 0 1 1 1 1 Homeodomain COLFI PF01410.18 ORF138746 - 0.021 14.1 3.0 0.15 11.3 0.1 2.1 2 0 0 2 2 2 0 Fibrillar collagen C-terminal domain Cons_hypoth95 PF03602.15 ORF136253 - 2.3e-62 209.8 0.0 2.7e-62 209.7 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 ORF136253 - 0.0011 18.6 0.0 0.0015 18.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain MethyltransfD12 PF02086.15 ORF136253 - 0.0047 16.6 0.0 0.42 10.2 0.0 2.1 1 1 1 2 2 2 2 D12 class N6 adenine-specific DNA methyltransferase RrnaAD PF00398.20 ORF136253 - 0.0052 15.9 0.0 0.0073 15.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_4 PF02390.17 ORF136253 - 0.018 14.5 0.0 0.025 14.0 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_31 PF13847.6 ORF136253 - 0.18 11.6 0.0 0.24 11.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain AMMECR1 PF01871.17 ORF132079 - 1.8e-46 157.8 0.0 2e-46 157.6 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 UreD PF01774.17 ORF130569 - 0.079 12.9 0.8 5 7.0 0.1 2.1 2 0 0 2 2 2 0 UreD urease accessory protein DSPc PF00782.20 ORF130444 - 1.6e-29 102.4 0.2 2.3e-29 101.9 0.2 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF130444 - 0.00016 21.3 0.0 0.00018 21.2 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Init_tRNA_PT PF04179.12 ORF130444 - 0.011 16.1 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 0 Rit1 DUSP-like domain PTPlike_phytase PF14566.6 ORF130444 - 0.022 14.9 0.1 0.031 14.4 0.1 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate CDKN3 PF05706.12 ORF130444 - 0.1 12.3 0.0 0.31 10.7 0.0 1.6 1 1 0 2 2 2 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Ras PF00071.22 ORF129679 - 3.9e-54 182.6 0.0 4.9e-54 182.3 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF129679 - 2.3e-30 105.3 0.0 3.5e-30 104.7 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF129679 - 3.6e-09 36.3 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF129679 - 1.3e-05 25.3 0.0 1.9e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF129679 - 0.00084 19.3 0.0 0.33 10.9 0.0 2.2 1 1 0 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 ORF129679 - 0.0041 16.5 0.0 0.007 15.8 0.0 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region MCM PF00493.23 ORF129679 - 0.012 14.7 0.0 0.019 14.1 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AAA_16 PF13191.6 ORF129679 - 0.13 12.6 0.0 0.25 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 ORF129679 - 0.17 11.9 0.0 0.4 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF4798 PF16055.5 ORF128249 - 0.0099 16.1 1.2 0.058 13.6 0.2 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4798) TRAM PF01938.20 ORF128018 - 7.2e-22 77.2 0.1 1.6e-21 76.1 0.1 1.6 1 0 0 1 1 1 1 TRAM domain Radical_SAM PF04055.21 ORF128018 - 4e-06 27.3 0.0 8.6e-06 26.2 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily TRAM_2 PF18693.1 ORF128018 - 0.00053 20.1 0.2 0.0027 17.8 0.2 2.1 1 1 0 1 1 1 1 TRAM domain dbPDZ_assoc PF16610.5 ORF126027 - 10 6.5 6.0 0.87 9.8 1.2 1.7 2 0 0 2 2 2 0 Unstructured region between two PDZ domains on Dlg5 Ribosomal_L21e PF01157.18 ORF12421 - 0.074 12.9 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L21e Glyco_hydro_16 PF00722.21 ORF123696 - 2.4e-05 23.9 0.1 4.6e-05 23.0 0.1 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 Sperm_act_pep PF08250.11 ORF123696 - 4.2 8.1 8.2 0.41 11.2 3.4 1.9 2 0 0 2 2 2 0 Sperm-activating peptides Peptidase_S74 PF13884.6 ORF122927 - 1.2e-06 28.8 0.1 2.4e-06 27.7 0.1 1.5 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 ORF122927 - 0.39 10.3 1.7 2.4 7.8 0.0 2.2 2 0 0 2 2 2 0 Trimerisation motif MORN PF02493.20 ORF120632 - 2.7e-05 23.8 3.2 0.0001 21.9 0.0 3.0 3 1 0 3 3 3 1 MORN repeat G_glu_transpept PF01019.21 ORF119202 - 4.5e-10 38.9 0.0 5.1e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase DUF4045 PF13254.6 ORF119202 - 1.3 8.6 3.0 1.4 8.5 0.9 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4045) LamB_YcsF PF03746.16 ORF117172 - 0.0046 16.7 0.2 2.1 8.0 0.1 2.2 1 1 1 2 2 2 2 LamB/YcsF family Ras PF00071.22 ORF115775 - 1.3e-49 167.9 0.2 1.7e-49 167.6 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF115775 - 9e-28 96.9 0.0 1.3e-27 96.4 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF115775 - 4.7e-11 42.4 0.0 5.6e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF115775 - 0.00089 19.3 0.0 0.0013 18.8 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF115775 - 0.002 18.0 0.0 1.3 8.9 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 ORF115775 - 0.0021 17.5 0.1 0.0047 16.3 0.1 1.6 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region ABC_tran PF00005.27 ORF115775 - 0.1 13.1 0.0 6.7 7.2 0.0 2.6 3 0 0 3 3 3 0 ABC transporter VEGF_C PF14554.6 ORF114422 - 0.39 10.8 7.3 0.85 9.8 5.9 2.5 1 1 0 1 1 1 0 VEGF heparin-binding domain C2 PF00168.30 ORF111682 - 0.00029 21.1 0.0 0.0006 20.1 0.0 1.5 1 0 0 1 1 1 1 C2 domain Ferlin_C PF16165.5 ORF111682 - 0.05 13.5 0.0 0.066 13.2 0.0 1.2 1 0 0 1 1 1 0 Ferlin C-terminus ASF1_hist_chap PF04729.13 ORF108703 - 8.9e-34 116.7 0.0 1.1e-33 116.4 0.0 1.1 1 0 0 1 1 1 1 ASF1 like histone chaperone ADH_zinc_N_2 PF13602.6 ORF106851 - 1.7e-10 42.1 0.0 2.7e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Ribosomal_L13 PF00572.18 ORF105387 - 3.3e-11 43.5 0.1 8.1e-10 39.0 0.0 2.6 2 1 0 2 2 2 1 Ribosomal protein L13 BTB_2 PF02214.22 ORF104076 - 3.8e-05 23.9 0.0 0.001 19.4 0.0 2.7 2 1 1 3 3 3 1 BTB/POZ domain Phage_holin_3_6 PF07332.11 ORF103915 - 1.1 9.3 4.5 1 9.4 2.7 1.9 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF765 PF05570.11 ORF10275 - 2.4 8.4 0.0 2.4 8.4 0.0 3.1 3 0 0 3 3 3 0 Circovirus protein of unknown function (DUF765) PAF-AH_p_II PF03403.13 NODE_36397_length_589_cov_54.283394_g29256_i0reverse_frame_1 - 0.02 13.4 0.0 0.027 13.0 0.0 1.2 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II mTERF PF02536.14 NODE_36389_length_589_cov_100.871841_g29248_i0forward_frame_1 - 8.5e-17 61.0 0.0 1.7e-16 60.0 0.0 1.5 1 1 0 1 1 1 1 mTERF tRNA_bind PF01588.20 NODE_36377_length_589_cov_232.947653_g29239_i0reverse_frame_1 - 0.00059 19.9 0.0 0.0013 18.8 0.0 1.6 1 0 0 1 1 1 1 Putative tRNA binding domain Orf78 PF06024.12 NODE_36376_length_589_cov_245.810469_g29238_i0reverse_frame_1 - 0.15 12.3 1.8 6.4 7.1 0.3 2.6 2 1 0 2 2 2 0 Orf78 (ac78) Gcd10p PF04189.13 NODE_36376_length_589_cov_245.810469_g29238_i0reverse_frame_1 - 1.1 8.4 9.5 5.9 5.9 0.3 2.1 2 0 0 2 2 2 0 Gcd10p family YABBY PF04690.13 NODE_36327_length_590_cov_639.214414_g29194_i0reverse_frame_1 - 0.0014 19.3 1.2 0.0019 18.8 1.2 1.2 1 0 0 1 1 1 1 YABBY protein REC104 PF17378.2 NODE_36327_length_590_cov_639.214414_g29194_i0reverse_frame_1 - 0.0017 18.2 0.4 0.0037 17.1 0.3 1.5 1 1 0 1 1 1 1 Meiotic recombination protein REC104 DUF1604 PF07713.13 NODE_36327_length_590_cov_639.214414_g29194_i0reverse_frame_1 - 0.063 13.1 0.6 0.11 12.3 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) Microcin PF03526.13 NODE_36318_length_591_cov_3.079137_g29185_i0forward_frame_1 - 0.05 13.4 0.1 0.13 12.1 0.1 1.7 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein 60KD_IMP PF02096.20 NODE_36316_length_591_cov_3.478417_g29183_i0reverse_frame_1 - 0.034 14.1 0.5 0.051 13.5 0.5 1.2 1 0 0 1 1 1 0 60Kd inner membrane protein MNNL PF07657.13 NODE_36316_length_591_cov_3.478417_g29183_i0reverse_frame_1 - 3.2 7.8 8.6 1.5 8.9 1.0 2.3 2 0 0 2 2 2 0 N terminus of Notch ligand SHIPPO-rpt PF07004.12 NODE_36313_length_591_cov_4.343525_g29180_i0forward_frame_1 - 1e-13 51.5 26.0 0.00011 23.0 4.8 6.3 6 0 0 6 6 6 6 Sperm-tail PG-rich repeat Acp26Ab PF05777.12 NODE_36302_length_591_cov_74.841727_g29169_i0forward_frame_1 - 0.053 14.2 0.2 0.13 12.9 0.0 1.7 2 0 0 2 2 2 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) SF-assemblin PF06705.11 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 1.8e-10 40.6 5.7 2.2e-10 40.3 5.7 1.0 1 0 0 1 1 1 1 SF-assemblin/beta giardin FlgM PF04316.13 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 0.0029 17.9 1.2 0.037 14.4 0.0 2.6 2 1 0 2 2 2 1 Anti-sigma-28 factor, FlgM Phage_Mu_Gam PF07352.12 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 0.014 15.4 7.8 0.27 11.1 1.4 2.6 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein AKNA PF12443.8 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 0.049 14.3 0.4 0.049 14.3 0.4 3.1 1 1 1 3 3 3 0 AT-hook-containing transcription factor ApoLp-III PF07464.11 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 0.088 12.9 6.6 1.3 9.1 1.8 2.1 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DUF1319 PF07028.11 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 0.16 12.2 3.1 1.9 8.8 2.0 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1319) YvrJ PF12841.7 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 0.28 10.8 1.5 3.7 7.2 0.1 2.7 3 0 0 3 3 3 0 YvrJ protein family Fib_alpha PF08702.10 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 0.28 11.4 4.8 0.26 11.5 0.2 2.3 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family PilJ PF13675.6 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 0.78 9.8 7.3 0.77 9.8 2.5 2.7 1 1 2 3 3 3 0 Type IV pili methyl-accepting chemotaxis transducer N-term Baculo_PEP_C PF04513.12 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 0.96 9.5 7.5 0.8 9.7 0.7 2.4 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Vps51 PF08700.11 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 1.1 9.4 6.2 8.1 6.6 0.3 2.9 3 1 0 3 3 3 0 Vps51/Vps67 YabA PF06156.13 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 1.6 9.4 9.6 0.52 11.0 2.0 2.8 1 1 1 2 2 2 0 Initiation control protein YabA Ku_C PF03730.14 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 4.2 8.1 10.4 20 5.9 0.2 2.9 2 1 0 2 2 2 0 Ku70/Ku80 C-terminal arm PhoU PF01895.19 NODE_36294_length_591_cov_95.467626_g29161_i0forward_frame_1 - 4.9 7.7 8.2 0.69 10.4 1.0 2.5 2 1 0 2 2 2 0 PhoU domain Baculo_11_kDa PF06143.11 NODE_36282_length_591_cov_189.208633_g29151_i0reverse_frame_1 - 0.064 12.8 0.1 10 5.8 0.0 2.5 2 0 0 2 2 2 0 Baculovirus 11 kDa family cwf18 PF08315.12 NODE_36280_length_591_cov_210.915468_g29149_i0forward_frame_1 - 0.088 13.5 6.3 0.14 12.8 6.3 1.4 1 1 0 1 1 1 0 cwf18 pre-mRNA splicing factor DUF2420 PF10336.9 NODE_36267_length_592_cov_1.915619_g29139_i0forward_frame_3 - 0.052 13.6 0.1 0.093 12.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) 5-nucleotidase PF06189.12 NODE_36267_length_592_cov_1.915619_g29139_i0forward_frame_3 - 0.084 11.8 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 5'-nucleotidase 2OG-FeII_Oxy PF03171.20 NODE_36260_length_592_cov_12.353680_g29132_i0reverse_frame_3 - 4.4e-11 43.2 0.0 7.6e-11 42.4 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily CAP_N PF01213.19 NODE_36260_length_592_cov_12.353680_g29132_i0reverse_frame_2 - 0.62 9.5 2.4 0.85 9.0 2.4 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal PRIMA1 PF16101.5 NODE_36260_length_592_cov_12.353680_g29132_i0reverse_frame_2 - 0.63 10.1 2.8 1.2 9.2 2.8 1.4 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 KcnmB2_inactiv PF09303.10 NODE_36260_length_592_cov_12.353680_g29132_i0forward_frame_3 - 0.14 12.0 0.0 0.31 10.9 0.0 1.6 1 0 0 1 1 1 0 KCNMB2, ball and chain domain Oxygenase-NA PF09859.9 NODE_36260_length_592_cov_12.353680_g29132_i0forward_frame_2 - 0.23 11.0 0.2 0.36 10.3 0.2 1.2 1 0 0 1 1 1 0 Oxygenase, catalysing oxidative methylation of damaged DNA DUF4625 PF15418.6 NODE_36232_length_592_cov_266.615799_g29106_i0reverse_frame_2 - 0.067 13.4 1.0 0.095 13.0 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4625) NIF PF03031.18 NODE_36215_length_593_cov_2.498208_g29091_i0reverse_frame_2 - 9.2e-24 84.0 0.1 1.7e-23 83.1 0.1 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Pho88 PF10032.9 NODE_36205_length_593_cov_61.765233_g29081_i0reverse_frame_3 - 0.084 12.1 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Phosphate transport (Pho88) V-ATPase_H_N PF03224.14 NODE_36202_length_593_cov_70.793907_g29079_i0reverse_frame_2 - 0.25 10.6 0.9 0.32 10.3 0.9 1.2 1 0 0 1 1 1 0 V-ATPase subunit H Gag_spuma PF03276.14 NODE_36202_length_593_cov_70.793907_g29079_i0forward_frame_3 - 0.2 10.0 0.0 0.24 9.8 0.0 1.1 1 0 0 1 1 1 0 Spumavirus gag protein TPR_14 PF13428.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 2.5e-13 49.6 0.0 0.0036 18.0 0.0 5.0 2 2 4 6 6 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 9.6e-12 45.2 4.5 9.6e-05 22.8 0.5 3.2 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_15 PF13429.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 3.1e-06 26.6 0.6 0.0072 15.6 0.3 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 4.7e-06 26.3 1.3 0.25 11.6 0.0 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 7.3e-06 26.3 0.8 1.6 9.5 0.0 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 8.1e-06 26.4 0.0 0.0037 17.9 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 2e-05 24.2 5.5 0.14 11.9 0.0 4.4 4 1 0 4 4 4 2 TPR repeat TPR_12 PF13424.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.00011 22.4 0.3 0.21 11.9 0.0 3.8 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.00011 21.8 3.1 2.4 8.1 0.2 5.0 5 0 0 5 5 5 1 Tetratricopeptide repeat NARP1 PF12569.8 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.00013 21.1 2.5 0.21 10.5 0.4 2.0 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 TPR_7 PF13176.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.00085 19.2 1.7 0.83 9.8 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat PPR PF01535.20 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0009 19.3 0.0 1 9.8 0.0 3.9 4 0 0 4 4 3 1 PPR repeat TPR_MalT PF17874.1 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0015 18.0 0.3 0.24 10.7 0.0 2.1 1 1 1 2 2 2 1 MalT-like TPR region TPR_8 PF13181.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0017 18.4 6.5 0.38 11.1 0.1 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat FAT PF02259.23 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0019 17.5 1.5 1.3 8.2 0.3 2.3 1 1 1 2 2 2 2 FAT domain TPR_21 PF09976.9 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.002 17.9 1.0 1.4 8.6 0.5 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat-like domain ANAPC3 PF12895.7 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.003 17.7 3.8 0.75 10.1 0.1 2.9 2 1 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.0036 17.1 4.7 0.51 10.3 0.0 4.0 4 1 0 5 5 4 1 Tetratricopeptide repeat DUF3808 PF10300.9 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.01 14.6 0.2 0.37 9.5 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3808) NatB_MDM20 PF09797.9 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.035 13.0 1.2 0.041 12.8 0.5 1.5 2 0 0 2 2 2 0 N-acetyltransferase B complex (NatB) non catalytic subunit DUF627 PF04781.12 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.039 14.0 0.5 0.19 11.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF627) Mad3_BUB1_I PF08311.12 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.06 13.3 1.6 0.53 10.3 0.0 2.9 3 1 0 3 3 3 0 Mad3/BUB1 homology region 1 Babuvirus_MP PF07234.11 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.15 12.3 0.1 0.27 11.4 0.1 1.6 1 0 0 1 1 1 0 Movement and RNA silencing protein Suf PF05843.14 NODE_36170_length_594_cov_2.597496_g29051_i0reverse_frame_3 - 0.17 11.8 0.7 0.36 10.8 0.6 1.4 1 1 0 1 1 1 0 Suppressor of forked protein (Suf) DUF713 PF05218.14 NODE_36169_length_594_cov_2.633274_g29050_i0reverse_frame_3 - 0.0046 16.7 0.1 0.0083 15.9 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF713) DUF4580 PF15162.6 NODE_36169_length_594_cov_2.633274_g29050_i0reverse_frame_2 - 0.061 12.9 0.0 0.09 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4580) Sigma70_r3 PF04539.16 NODE_36155_length_594_cov_86.638640_g29036_i0reverse_frame_2 - 0.14 12.2 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 region 3 RRM_1 PF00076.22 NODE_36139_length_594_cov_264.121646_g29020_i0reverse_frame_3 - 1.6e-08 34.2 0.0 6.3e-08 32.3 0.0 1.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 NODE_36139_length_594_cov_264.121646_g29020_i0reverse_frame_3 - 0.027 14.6 0.1 0.041 14.0 0.1 1.4 1 0 0 1 1 1 0 Limkain b1 SOBP PF15279.6 NODE_36139_length_594_cov_264.121646_g29020_i0forward_frame_3 - 0.028 15.1 6.3 0.028 15.1 6.3 1.6 2 0 0 2 2 2 0 Sine oculis-binding protein TPR_MLP1_2 PF07926.12 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.0052 16.9 8.1 0.0073 16.4 8.1 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein phiKZ_IP PF12699.7 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.0092 15.2 0.2 0.011 14.9 0.2 1.1 1 0 0 1 1 1 1 phiKZ-like phage internal head proteins Spc7 PF08317.11 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.092 11.6 6.0 0.12 11.2 6.0 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Ceramidase_alk PF04734.13 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.11 11.1 0.3 0.12 11.0 0.3 1.1 1 0 0 1 1 1 0 Neutral/alkaline non-lysosomal ceramidase, N-terminal Atg14 PF10186.9 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.12 11.4 3.1 0.16 11.1 3.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 HemX PF04375.14 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.13 11.5 5.3 0.17 11.1 5.3 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Methyltransf_14 PF08484.11 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.19 11.5 1.5 8.8 6.1 0.0 2.1 2 0 0 2 2 2 0 C-methyltransferase C-terminal domain OmpH PF03938.14 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.25 11.7 7.6 0.31 11.4 7.6 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TEX13 PF15186.6 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.3 10.7 6.9 0.4 10.3 6.9 1.1 1 0 0 1 1 1 0 Testis-expressed sequence 13 protein family FUSC PF04632.12 NODE_36138_length_594_cov_402.611807_g29019_i0reverse_frame_2 - 0.52 8.8 3.1 0.66 8.4 3.1 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF1415 PF07209.12 NODE_36128_length_594_cov_34496.078712_g20842_i1forward_frame_3 - 0.00044 20.1 0.0 0.00056 19.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1415) Alba PF01918.21 ORF99941 - 3.1e-10 39.7 0.1 4.3e-10 39.3 0.1 1.2 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 ORF99941 - 0.011 15.7 0.0 0.012 15.6 0.0 1.3 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P WES_acyltransf PF03007.16 ORF99385 - 6.2e-09 36.0 0.0 1.1e-08 35.2 0.0 1.3 2 0 0 2 2 2 1 Wax ester synthase-like Acyl-CoA acyltransferase domain zf-CCHC PF00098.23 ORF98975 - 0.00044 20.2 11.5 0.038 14.1 0.9 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 ORF98975 - 0.012 15.6 3.6 0.29 11.1 0.4 2.3 2 0 0 2 2 2 0 Zinc knuckle zf-C2HE PF16278.5 ORF98975 - 0.2 12.1 2.2 5.4 7.5 0.1 2.3 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Zn_ribbon_recom PF13408.6 ORF98975 - 0.29 11.7 5.5 0.31 11.6 0.4 2.5 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain Ntox16 PF15523.6 ORF98975 - 2.4 8.4 8.5 2 8.7 4.3 2.5 1 1 1 2 2 2 0 Novel toxin 16 zf-CCHC_4 PF14392.6 ORF98975 - 4.1 7.2 8.2 16 5.3 0.5 2.6 2 0 0 2 2 2 0 Zinc knuckle zf-CCHC_2 PF13696.6 ORF98975 - 5.2 7.0 14.6 3.1 7.7 4.2 2.5 2 0 0 2 2 2 0 Zinc knuckle zf-CCHC_5 PF14787.6 ORF98975 - 10 6.0 9.6 23 4.8 3.1 2.4 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger NAM-associated PF14303.6 ORF98206 - 0.19 12.4 4.9 0.27 11.9 4.9 1.3 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain ADIP PF11559.8 ORF96821 - 0.0016 18.5 1.0 0.0016 18.5 1.0 2.4 3 0 0 3 3 3 1 Afadin- and alpha -actinin-Binding DUF2095 PF09868.9 ORF96821 - 0.045 13.7 3.4 0.095 12.7 0.2 2.6 1 1 2 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2095) Cep57_CLD_2 PF14197.6 ORF96821 - 0.065 13.3 1.0 0.065 13.3 1.0 2.3 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 DivIC PF04977.15 ORF96821 - 0.075 12.8 0.9 0.075 12.8 0.9 2.2 2 0 0 2 2 2 0 Septum formation initiator TPX2 PF06886.11 ORF96821 - 0.096 12.9 1.0 0.096 12.9 1.0 2.2 2 0 0 2 2 2 0 Targeting protein for Xklp2 (TPX2) PRKG1_interact PF15898.5 ORF96821 - 0.13 13.2 9.4 0.17 12.8 2.2 2.4 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain Keratin_B2 PF01500.17 ORF94997 - 0.08 12.9 2.4 0.19 11.7 2.4 1.6 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Keratin_B2_2 PF13885.6 ORF94997 - 0.72 9.9 3.1 4.9 7.2 3.1 2.2 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein B9-C2 PF07162.11 ORF93752 - 6.7e-49 166.3 0.3 8.8e-49 166.0 0.3 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF93752 - 0.11 12.6 0.2 0.23 11.6 0.2 1.5 1 0 0 1 1 1 0 Cerato-platanin Aldo_ket_red PF00248.21 ORF92443 - 7.3e-30 104.2 0.0 2.4e-28 99.2 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Gly-zipper_YMGG PF13441.6 ORF92247 - 0.013 15.2 41.9 0.04 13.7 15.1 2.5 2 0 0 2 2 2 0 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 ORF92247 - 0.23 11.5 41.5 0.24 11.4 16.8 2.7 2 0 0 2 2 2 0 Glycine zipper YjgF_endoribonc PF14588.6 ORF89801 - 1.8e-33 115.8 0.0 2.1e-33 115.6 0.0 1.0 1 0 0 1 1 1 1 YjgF/chorismate_mutase-like, putative endoribonuclease Ribonuc_L-PSP PF01042.21 ORF89801 - 8.6e-19 67.7 0.0 1.2e-18 67.3 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF2138 PF09909.9 ORF89570 - 1.4e-52 178.8 1.9 1.6e-52 178.6 1.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2138) Rtf2 PF04641.12 ORF88922 - 2.4e-23 82.9 17.6 2.7e-23 82.7 17.6 1.0 1 0 0 1 1 1 1 Rtf2 RING-finger zf-Di19 PF05605.12 ORF88922 - 0.026 14.8 2.7 0.31 11.4 0.1 3.2 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2 PF00096.26 ORF88922 - 0.036 14.5 0.4 0.16 12.5 0.4 2.1 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-ribbon_3 PF13248.6 ORF88922 - 0.037 13.4 2.6 0.04 13.3 0.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2HC_2 PF13913.6 ORF88922 - 0.065 13.2 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 zinc-finger of a C2HC-type Prok-RING_4 PF14447.6 ORF88922 - 0.081 12.8 0.9 1.2 9.0 1.2 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 DMAP_binding PF06464.11 ORF88922 - 0.13 13.1 5.9 0.24 12.2 5.9 1.4 1 0 0 1 1 1 0 DMAP1-binding Domain DUF3128 PF11326.8 ORF88922 - 0.66 10.4 5.8 2.6 8.5 5.8 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3128) ARS2 PF04959.13 ORF88922 - 0.75 10.1 0.1 0.75 10.1 0.1 2.8 2 1 1 3 3 3 0 Arsenite-resistance protein 2 Calreticulin PF00262.18 ORF87203 - 7.3e-25 87.6 0.9 2.4e-21 76.0 0.1 2.1 1 1 1 2 2 2 2 Calreticulin family zf-LITAF-like PF10601.9 ORF85465 - 3.1e-08 33.7 15.8 4.1e-08 33.4 15.8 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain RINGv PF12906.7 ORF80070 - 3.1e-15 56.0 8.4 4.8e-15 55.4 8.4 1.3 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF80070 - 0.00062 19.9 6.3 0.00096 19.3 5.3 1.8 1 1 1 2 2 2 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF80070 - 0.0039 17.5 8.7 0.0044 17.3 7.7 1.6 1 1 1 2 2 2 1 Ring finger domain DUF587 PF04532.12 ORF80070 - 0.11 11.8 2.1 0.19 11.0 2.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF587) zf-C3HC4_3 PF13920.6 ORF80070 - 8 6.4 9.9 16 5.4 8.8 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF1322 PF07032.11 ORF745 - 0.3 11.7 7.9 2.2 8.9 0.4 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1322) zf-MYND PF01753.18 ORF72665 - 4.1e-09 36.4 23.0 7.4e-09 35.6 23.0 1.5 1 0 0 1 1 1 1 MYND finger VEGFR-2_TMD PF17988.1 ORF72279 - 0.11 11.9 0.5 0.2 11.1 0.5 1.4 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain B9-C2 PF07162.11 ORF71939 - 6.7e-49 166.3 0.3 8.8e-49 166.0 0.3 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF71939 - 0.11 12.6 0.2 0.23 11.6 0.2 1.5 1 0 0 1 1 1 0 Cerato-platanin HI0933_like PF03486.14 ORF70191 - 0.13 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein AFP PF02420.15 ORF69705 - 0.1 13.0 1.3 0.33 11.4 1.3 1.9 1 0 0 1 1 1 0 Insect antifreeze protein repeat Ribosomal_L11 PF00298.19 ORF69003 - 1.3 9.6 3.4 1.9 9.0 0.7 2.2 2 0 0 2 2 2 0 Ribosomal protein L11, RNA binding domain Tyrosinase PF00264.20 ORF68926 - 1.4e-07 32.1 0.1 1.9e-07 31.6 0.1 1.4 1 0 0 1 1 1 1 Common central domain of tyrosinase TMEM135_C_rich PF15982.5 ORF68806 - 4.5e-05 24.1 1.5 6.2e-05 23.6 1.2 1.4 1 1 0 1 1 1 1 N-terminal cysteine-rich region of Transmembrane protein 135 Tim17 PF02466.19 ORF68806 - 0.012 16.0 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family ASFV_J13L PF05568.11 ORF66670 - 5.4e-06 26.3 9.9 0.022 14.5 1.8 2.9 1 1 1 2 2 2 2 African swine fever virus J13L protein HC2 PF07382.11 ORF66670 - 7.9e-06 26.1 0.0 1.1e-05 25.7 0.0 1.1 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 KIP1 PF07765.12 ORF66656 - 0.96 9.6 6.2 0.27 11.4 2.4 2.0 2 0 0 2 2 2 0 KIP1-like protein DUF87 PF01935.17 ORF66656 - 1.7 8.6 6.4 0.56 10.3 1.8 1.9 1 1 1 2 2 2 0 Helicase HerA, central domain LMBR1 PF04791.16 ORF66656 - 5.8 5.7 6.0 6.5 5.5 6.0 1.2 1 1 0 1 1 1 0 LMBR1-like membrane protein DUF4787 PF16029.5 ORF63744 - 0.16 12.1 0.4 0.16 12.1 0.4 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4787) HC2 PF07382.11 ORF61624 - 8.9 6.3 8.9 0.53 10.3 3.0 1.8 2 0 0 2 2 2 0 Histone H1-like nucleoprotein HC2 zf-C2H2 PF00096.26 ORF60436 - 7.8e-14 51.3 16.1 0.00036 20.8 4.5 3.6 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF60436 - 7.5e-10 38.8 14.6 0.012 16.3 2.8 3.8 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF60436 - 8.8e-09 35.4 20.6 0.00013 22.2 1.8 4.5 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2HC_2 PF13913.6 ORF60436 - 0.0068 16.3 7.3 2.8 8.0 0.1 3.5 3 0 0 3 3 3 2 zinc-finger of a C2HC-type FOXP-CC PF16159.5 ORF60436 - 0.0069 17.0 2.2 0.41 11.3 0.0 2.5 2 0 0 2 2 2 1 FOXP coiled-coil domain zf-C2H2_6 PF13912.6 ORF60436 - 0.016 15.2 0.4 0.016 15.2 0.4 3.8 3 1 0 3 3 3 0 C2H2-type zinc finger zf-met PF12874.7 ORF60436 - 0.054 13.9 3.2 8.8 6.9 0.3 3.4 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_8 PF15909.5 ORF60436 - 0.073 13.4 9.8 0.062 13.6 2.5 2.6 2 1 1 3 3 3 0 C2H2-type zinc ribbon CCAP PF11105.8 ORF60436 - 0.098 12.6 3.2 0.32 11.0 0.4 2.3 1 1 1 2 2 2 0 Arthropod cardioacceleratory peptide 2a BolA PF01722.18 ORF60436 - 0.1 12.9 0.1 0.75 10.1 0.1 2.1 1 1 1 2 2 2 0 BolA-like protein zf-C2H2_11 PF16622.5 ORF60436 - 0.16 11.8 0.4 0.16 11.8 0.4 2.8 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-LYAR PF08790.11 ORF60436 - 0.22 11.5 5.2 2.4 8.1 0.3 3.4 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger ADK_lid PF05191.14 ORF60436 - 0.3 11.1 5.7 0.48 10.4 2.7 2.3 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-C2H2_aberr PF17017.5 ORF60436 - 0.73 9.9 11.3 0.65 10.1 0.3 3.1 1 1 2 3 3 3 0 Aberrant zinc-finger Calreticulin PF00262.18 ORF60359 - 4.9e-25 88.2 1.2 1.4e-21 76.8 0.1 2.1 1 1 1 2 2 2 2 Calreticulin family DUF1088 PF06469.11 ORF59079 - 0.028 14.1 0.1 0.057 13.1 0.1 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1088) Srg PF02118.21 ORF59079 - 0.03 14.0 1.4 0.03 14.0 1.4 1.7 2 0 0 2 2 2 0 Srg family chemoreceptor Virul_Fac PF10139.9 ORF58141 - 0.0091 14.3 4.7 0.011 13.9 4.7 1.0 1 0 0 1 1 1 1 Putative bacterial virulence factor CSG2 PF16965.5 ORF58141 - 1.6 7.6 5.4 4.2 6.2 0.8 2.1 1 1 1 2 2 2 0 Ceramide synthase regulator Presenilin PF01080.17 ORF58141 - 2.2 7.0 8.9 2.4 6.8 8.9 1.3 1 0 0 1 1 1 0 Presenilin Band_3_cyto PF07565.13 ORF58141 - 3 7.6 7.7 3.4 7.4 7.7 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain CIA30 PF08547.12 ORF56223 - 2e-22 79.9 0.1 2.3e-22 79.7 0.1 1.1 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) MFS_3 PF05977.13 ORF56223 - 0.13 10.6 0.0 0.18 10.2 0.0 1.1 1 0 0 1 1 1 0 Transmembrane secretion effector UCH PF00443.29 ORF55444 - 3e-23 82.7 3.3 3.5e-23 82.4 3.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF55444 - 1.5e-08 34.7 1.5 2.5e-08 33.9 1.5 1.3 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Rhodanese PF00581.20 ORF5502 - 7.3e-07 29.7 0.0 1.2e-06 29.0 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain Roc PF08477.13 ORF51486 - 0.00018 21.7 0.0 0.00026 21.2 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF51486 - 0.0017 18.0 0.0 0.0025 17.4 0.0 1.3 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF51486 - 0.0043 16.5 0.0 0.0069 15.8 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_23 PF13476.6 ORF51486 - 0.0064 17.0 0.2 3.6 8.0 0.1 2.2 2 0 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.23 ORF51486 - 0.042 13.9 0.0 0.073 13.2 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase GDP_Man_Dehyd PF16363.5 ORF51274 - 2.5e-65 221.1 0.0 2.9e-65 220.9 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF51274 - 6.8e-18 65.0 0.0 9.2e-18 64.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family AAA PF00004.29 ORF4976 - 0.015 15.7 0.5 0.026 14.9 0.1 1.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Mrx7 PF10906.8 ORF4976 - 0.015 15.5 0.4 0.038 14.2 0.4 1.6 1 0 0 1 1 1 0 MIOREX complex component 7 BRAP2 PF07576.12 ORF4976 - 0.017 15.3 0.4 0.087 13.1 0.1 2.1 2 0 0 2 2 2 0 BRCA1-associated protein 2 Ras PF00071.22 ORF47956 - 6.9e-52 175.3 0.0 8.2e-52 175.1 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF47956 - 3.5e-23 82.1 0.0 5.4e-23 81.5 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF47956 - 2.6e-08 33.5 0.0 3.1e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF47956 - 0.063 13.4 0.0 0.13 12.4 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF47956 - 0.064 12.8 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Gtr1_RagA PF04670.12 ORF47956 - 0.068 12.5 0.0 0.099 12.0 0.0 1.3 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Astro_capsid_p PF12226.8 ORF45789 - 0.053 12.7 0.0 0.085 12.0 0.0 1.3 1 0 0 1 1 1 0 Turkey astrovirus capsid protein ADK PF00406.22 ORF42698 - 2.7e-39 134.7 0.0 3.3e-39 134.4 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF42698 - 1.1e-24 87.5 0.0 1.5e-24 87.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF42698 - 7.8e-08 32.9 0.1 1.3e-07 32.3 0.1 1.3 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF42698 - 0.00043 20.0 0.4 0.39 10.4 0.0 2.2 2 0 0 2 2 2 2 Thymidylate kinase AAA_33 PF13671.6 ORF42698 - 0.0017 18.5 0.0 0.0042 17.2 0.0 1.8 1 1 0 1 1 1 1 AAA domain CoaE PF01121.20 ORF42698 - 0.0062 16.2 0.1 0.63 9.7 0.0 2.8 2 1 1 3 3 3 1 Dephospho-CoA kinase dNK PF01712.19 ORF42698 - 0.021 14.7 4.9 0.061 13.2 2.6 2.0 1 1 0 2 2 2 0 Deoxynucleoside kinase AAA_19 PF13245.6 ORF42698 - 0.049 14.0 0.1 0.2 12.0 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF42698 - 0.05 13.8 0.1 0.098 12.9 0.0 1.6 1 1 1 2 2 2 0 AAA domain GAS PF13851.6 ORF40680 - 0.61 9.4 13.3 3.2 7.1 5.3 2.3 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Methyltr_RsmB-F PF01189.17 ORF39757 - 2.6e-19 69.7 0.0 3.1e-19 69.4 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F B9-C2 PF07162.11 ORF38907 - 6.7e-49 166.3 0.3 8.8e-49 166.0 0.3 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF38907 - 0.11 12.6 0.2 0.23 11.6 0.2 1.5 1 0 0 1 1 1 0 Cerato-platanin Ferric_reduct PF01794.19 ORF37924 - 0.025 14.7 0.2 0.047 13.8 0.2 1.4 1 0 0 1 1 1 0 Ferric reductase like transmembrane component Flavi_NS2A PF01005.19 ORF37924 - 0.064 13.4 0.0 0.088 13.0 0.0 1.1 1 0 0 1 1 1 0 Flavivirus non-structural protein NS2A MpPF26 PF07666.11 ORF34591 - 0.02 15.0 3.4 0.25 11.5 1.3 2.2 2 0 0 2 2 2 0 M penetrans paralogue family 26 GWT1 PF06423.12 ORF34591 - 0.053 13.6 0.3 0.085 13.0 0.2 1.6 1 1 0 1 1 1 0 GWT1 FAST_1 PF06743.15 ORF33733 - 0.021 14.7 0.9 0.13 12.2 0.2 2.5 2 1 1 3 3 3 0 FAST kinase-like protein, subdomain 1 POTRA_2 PF08479.11 ORF33733 - 0.078 12.8 0.1 0.49 10.3 0.0 2.2 1 1 2 3 3 3 0 POTRA domain, ShlB-type B9-C2 PF07162.11 ORF3286 - 6.7e-49 166.3 0.3 8.8e-49 166.0 0.3 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF3286 - 0.11 12.6 0.2 0.23 11.6 0.2 1.5 1 0 0 1 1 1 0 Cerato-platanin PAN_1 PF00024.26 ORF30632 - 0.026 14.5 0.1 0.043 13.8 0.1 1.4 1 0 0 1 1 1 0 PAN domain PAN_4 PF14295.6 ORF30632 - 0.038 13.9 1.5 0.091 12.7 1.5 1.7 1 0 0 1 1 1 0 PAN domain Metallophos PF00149.28 ORF27281 - 8.9e-06 26.3 0.4 1.1e-05 26.0 0.4 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF27281 - 0.013 15.7 0.1 0.015 15.5 0.1 1.3 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain FAM35_C PF15793.5 ORF27281 - 0.1 12.0 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein family FAM35, C-terminal Ras PF00071.22 ORF26140 - 6e-22 78.0 0.0 7.5e-22 77.7 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF26140 - 0.0002 21.5 0.0 0.00031 21.0 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF26140 - 0.021 14.3 0.0 0.029 13.8 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family ADH_zinc_N_2 PF13602.6 ORF2612 - 6.8e-08 33.6 0.0 1.1e-07 32.9 0.0 1.4 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 ORF2612 - 0.0022 18.0 0.0 0.0029 17.6 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase CX9C PF16860.5 ORF24413 - 0.0047 16.9 5.4 0.28 11.2 0.1 2.6 2 0 0 2 2 2 2 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Sec66 PF09802.9 ORF24413 - 0.023 14.3 0.0 0.039 13.6 0.0 1.4 1 0 0 1 1 1 0 Preprotein translocase subunit Sec66 DUF4904 PF16247.5 ORF24413 - 0.096 12.5 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4904) BPD_transp_1 PF00528.22 ORF22930 - 1.6e-33 116.0 9.2 1.8e-33 115.8 9.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Toxin_6 PF05453.12 ORF22805 - 1.3 9.5 4.2 3 8.4 0.9 2.5 2 0 0 2 2 2 0 BmTXKS1/BmP02 toxin family TB2_DP1_HVA22 PF03134.19 ORF21399 - 1.3e-24 86.0 4.9 1.3e-24 86.0 4.9 1.6 1 1 1 2 2 2 1 TB2/DP1, HVA22 family B9-C2 PF07162.11 ORF19529 - 6.7e-49 166.3 0.3 8.8e-49 166.0 0.3 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Cerato-platanin PF07249.12 ORF19529 - 0.11 12.6 0.2 0.23 11.6 0.2 1.5 1 0 0 1 1 1 0 Cerato-platanin TBP PF00352.21 ORF19115 - 1.2e-64 214.3 1.1 1.7e-31 108.0 0.0 2.1 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 ORF19115 - 1.6e-06 28.2 0.4 0.062 13.4 0.0 2.5 2 1 0 2 2 2 2 Domain of unknown function (DUF3378) Peptidase_S68 PF10461.9 ORF18713 - 0.24 11.6 0.5 0.24 11.6 0.5 2.8 3 0 0 3 3 3 0 Peptidase S68 ETS_PEA3_N PF04621.13 ORF17966 - 0.55 10.1 7.7 0.67 9.8 7.7 1.1 1 0 0 1 1 1 0 PEA3 subfamily ETS-domain transcription factor N terminal domain Calreticulin PF00262.18 ORF17686 - 6.8e-25 87.7 1.0 2.1e-21 76.2 0.1 2.1 1 1 1 2 2 2 2 Calreticulin family Pkinase PF00069.25 ORF17130 - 1.2e-40 139.5 0.1 1.4e-40 139.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF17130 - 6.4e-26 91.2 0.0 7.2e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF17130 - 1.8e-09 37.3 0.0 2.2e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF17130 - 1.6e-05 23.9 0.0 2e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF17130 - 0.012 15.0 0.0 0.017 14.5 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF17130 - 0.044 12.7 0.1 0.06 12.3 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 ORF17130 - 0.1 12.2 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUF2569 PF10754.9 ORF151943 - 0.48 10.8 24.1 0.15 12.5 8.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2569) MARVEL PF01284.23 ORF151943 - 4.9 7.2 26.3 1.4 8.9 4.7 2.7 1 1 2 3 3 3 0 Membrane-associating domain DUF2975 PF11188.8 ORF151943 - 5.4 6.9 16.9 5.8e+02 0.3 16.9 2.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2975) Receptor_2B4 PF11465.8 ORF14775 - 0.088 13.0 0.3 0.17 12.1 0.3 1.5 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks119.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks119.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks119.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks119.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_M1 PF01433.20 ORF114293 - 3.3e-24 85.7 2.1 6.4e-24 84.7 2.1 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF114293 - 1.7e-20 74.0 0.8 3.1e-20 73.2 0.8 1.5 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF114293 - 1.4e-11 44.5 0.3 5.1e-11 42.6 0.3 2.0 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal DUF916 PF06030.12 ORF114293 - 0.043 13.9 0.1 0.088 12.9 0.1 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF916) AMP-binding PF00501.28 ORF11218 - 7.2e-81 271.9 0.0 8.8e-81 271.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 ORF11218 - 1.6e-17 63.2 2.3 4.4e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 ORF11218 - 2.9e-17 63.4 0.0 6.2e-17 62.3 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain TC1 PF15063.6 ORF82629 - 6.7 6.7 21.8 2.3 8.2 0.1 5.7 3 1 2 5 5 5 0 Thyroid cancer protein 1 Tub PF01167.18 ORF30578 - 2.6e-82 276.2 0.0 2.6e-82 276.2 0.0 2.4 2 1 0 2 2 2 1 Tub family Copine PF07002.16 ORF119263 - 7.6e-44 149.8 0.1 1.2e-43 149.1 0.1 1.3 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF119263 - 1.4e-06 28.6 0.1 8.7e-05 22.7 0.1 2.4 2 0 0 2 2 2 1 vWA found in TerF C terminus DUF1364 PF07102.12 ORF119263 - 0.011 15.5 0.0 0.032 14.1 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) SNX17_FERM_C PF18116.1 ORF119263 - 0.43 10.7 3.7 13 5.9 1.9 3.2 2 1 0 2 2 2 0 Sorting Nexin 17 FERM C-terminal domain Clathrin PF00637.20 ORF116680 - 2.6e-101 335.4 17.1 2e-29 102.3 0.3 4.1 4 0 0 4 4 4 4 Region in Clathrin and VPS Coatomer_WDAD PF04053.14 ORF116680 - 9.8e-05 21.6 0.4 0.0047 16.0 0.0 2.6 3 0 0 3 3 3 1 Coatomer WD associated region TPR_14 PF13428.6 ORF116680 - 0.00027 21.5 0.3 20 6.4 0.0 5.6 5 1 0 5 5 5 1 Tetratricopeptide repeat PPR PF01535.20 ORF116680 - 0.014 15.6 0.6 1.2e+02 3.3 0.0 5.3 6 0 0 6 6 6 0 PPR repeat TPR_1 PF00515.28 ORF116680 - 0.063 13.1 7.5 7.2 6.6 0.0 5.6 6 0 0 6 6 6 0 Tetratricopeptide repeat Csm1_B PF18211.1 ORF116680 - 0.14 12.0 0.2 0.92 9.4 0.2 2.4 2 0 0 2 2 2 0 Csm1 subunit domain B TPR_2 PF07719.17 ORF116680 - 0.17 12.1 7.0 27 5.2 0.0 5.8 6 0 0 6 6 6 0 Tetratricopeptide repeat DASH_Dad4 PF08650.10 ORF116680 - 0.27 11.2 1.9 1 9.4 1.9 2.0 1 0 0 1 1 1 0 DASH complex subunit Dad4 TPR_8 PF13181.6 ORF116680 - 8.5 6.9 9.4 74 3.9 0.2 5.4 6 0 0 6 6 6 0 Tetratricopeptide repeat XRN_N PF03159.18 ORF112230 - 8e-19 68.0 0.6 1.2e-18 67.5 0.0 1.5 2 0 0 2 2 2 1 XRN 5'-3' exonuclease N-terminus DUF4537 PF15057.6 ORF112230 - 0.01 15.9 0.0 0.023 14.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4537) Tudor_3 PF18115.1 ORF112230 - 0.098 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 DNA repair protein Crb2 Tudor domain XRN_M PF17846.1 ORF112230 - 0.1 11.5 5.6 0.15 11.0 0.1 2.8 4 0 0 4 4 4 0 Xrn1 helical domain SMN PF06003.12 ORF112230 - 0.15 11.3 0.0 0.15 11.3 0.0 2.7 3 0 0 3 3 3 0 Survival motor neuron protein (SMN) Glyco_hydro_72 PF03198.14 ORF66243 - 0.0017 17.7 0.0 0.0031 16.8 0.0 1.4 1 0 0 1 1 1 1 Glucanosyltransferase EB PF01683.18 ORF66243 - 0.092 13.1 20.4 0.045 14.0 5.2 2.9 2 1 0 3 3 3 0 EB module TPH PF13868.6 ORF4795 - 4.3 5.8 85.5 5.3 5.4 55.5 2.7 1 1 1 2 2 2 0 Trichohyalin-plectin-homology domain VDE PF07137.11 ORF114759 - 3e-31 108.8 0.4 7.1e-31 107.6 0.0 1.8 2 0 0 2 2 2 1 VDE lipocalin domain TRP PF06011.12 ORF85072 - 3e-09 36.1 7.3 2e-08 33.4 7.4 2.0 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF365 PF04033.12 ORF85072 - 0.057 13.7 1.2 0.18 12.1 1.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF365) DUF4116 PF13475.6 ORF66438 - 4.2e-25 87.2 0.0 7e-08 32.1 0.0 5.4 2 1 3 5 5 5 5 Domain of unknown function (DUF4116) KR PF08659.10 ORF66438 - 0.0004 20.3 0.0 0.0012 18.8 0.0 1.8 1 0 0 1 1 1 1 KR domain Rdx PF10262.9 ORF39000 - 1.7e-07 31.3 0.3 1.3e-06 28.5 0.0 2.5 2 0 0 2 2 2 1 Rdx family TPR_2 PF07719.17 ORF101122 - 2.5e-10 39.7 35.8 0.00011 22.0 2.6 9.2 10 0 0 10 10 10 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF101122 - 2.5e-10 40.7 10.1 0.0023 18.4 0.1 5.8 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF101122 - 4.4e-06 26.9 14.0 0.28 11.5 0.1 7.9 6 2 2 9 9 9 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF101122 - 8.2e-06 26.4 6.2 0.17 12.5 0.1 5.4 6 1 0 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF101122 - 9.3e-06 26.0 22.3 0.00021 21.7 1.3 6.9 8 0 0 8 8 7 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF101122 - 4.8e-05 23.0 39.4 0.0078 16.0 3.5 8.4 9 0 0 9 9 9 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF101122 - 0.00012 22.3 28.1 0.0014 18.8 1.9 5.4 4 1 2 6 6 5 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.6 ORF101122 - 0.00049 20.1 28.8 0.019 15.2 1.9 7.3 8 0 0 8 8 8 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF101122 - 0.0011 18.8 13.1 0.52 10.5 1.0 6.0 6 0 0 6 6 5 1 Tetratricopeptide repeat Wzy_C_2 PF11846.8 ORF101122 - 0.0075 16.2 0.4 0.044 13.7 0.1 2.2 2 0 0 2 2 2 1 Virulence factor membrane-bound polymerase, C-terminal DUF1948 PF09185.10 ORF101122 - 0.055 13.3 1.4 0.1 12.4 0.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1948) Sec16_C PF12931.7 ORF101122 - 0.06 13.0 1.4 0.15 11.7 1.4 1.8 1 0 0 1 1 1 0 Sec23-binding domain of Sec16 TPR_14 PF13428.6 ORF101122 - 0.074 13.9 5.6 57 4.9 0.0 5.2 5 2 2 7 7 4 0 Tetratricopeptide repeat TPR_21 PF09976.9 ORF101122 - 0.6 9.8 11.1 0.2 11.3 2.1 3.4 2 2 1 3 3 3 0 Tetratricopeptide repeat-like domain TPR_11 PF13414.6 ORF101122 - 0.98 9.2 19.9 1 9.1 0.5 5.0 4 1 1 5 5 5 0 TPR repeat YfiO PF13525.6 ORF101122 - 1 9.0 17.5 0.4 10.4 3.2 4.4 4 1 0 4 4 4 0 Outer membrane lipoprotein PX PF00787.24 ORF29417 - 2.8e-06 27.3 0.3 2.8e-06 27.3 0.3 2.6 3 0 0 3 3 3 1 PX domain SLATT_6 PF18169.1 ORF29417 - 0.00086 18.9 7.7 0.19 11.3 0.2 3.7 3 0 0 3 3 3 2 SMODS and SLOG-associating 2TM effector domain 6 DUF445 PF04286.12 ORF29417 - 0.29 10.9 7.3 0.67 9.7 7.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF445) Pkinase PF00069.25 ORF134632 - 7.5e-37 127.1 0.0 8.2e-18 64.7 0.0 3.1 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF134632 - 2.5e-08 33.5 0.0 0.042 13.1 0.0 3.1 2 1 0 2 2 2 2 Protein tyrosine kinase HD_4 PF13328.6 ORF110002 - 5.2e-42 143.2 0.8 1e-41 142.3 0.8 1.5 1 0 0 1 1 1 1 HD domain RelA_SpoT PF04607.17 ORF110002 - 5.7e-36 123.3 0.8 1.4e-35 122.1 0.1 2.0 2 0 0 2 2 2 1 Region found in RelA / SpoT proteins TGS PF02824.21 ORF110002 - 8.6e-22 77.0 0.0 2.3e-21 75.6 0.0 1.8 1 0 0 1 1 1 1 TGS domain ACT_4 PF13291.6 ORF110002 - 8.9e-16 58.3 2.0 3.2e-15 56.5 1.3 2.4 2 0 0 2 2 2 1 ACT domain HD PF01966.22 ORF110002 - 7.1e-08 32.7 1.4 3.4e-07 30.5 0.2 2.6 2 1 1 3 3 3 1 HD domain TFIIS_M PF07500.14 ORF110002 - 0.034 14.6 4.4 0.041 14.4 0.1 2.9 3 1 0 3 3 3 0 Transcription factor S-II (TFIIS), central domain COX5A PF02284.16 ORF110002 - 0.063 13.3 0.1 15 5.6 0.0 2.9 2 0 0 2 2 2 0 Cytochrome c oxidase subunit Va EMC3_TMCO1 PF01956.16 ORF110002 - 0.12 12.1 0.4 0.27 10.9 0.4 1.5 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF2007 PF09413.10 ORF110002 - 0.13 12.4 0.0 1.1 9.5 0.0 2.5 2 1 0 2 2 2 0 Putative prokaryotic signal transducing protein DUF2937 PF11157.8 ORF8731 - 0.13 12.0 8.5 0.081 12.6 2.2 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF2937) Tropomyosin_1 PF12718.7 ORF8731 - 3.9 7.6 58.9 0.17 12.0 16.4 3.9 2 2 1 3 3 3 0 Tropomyosin like TMEM154 PF15102.6 ORF16500 - 0.018 15.0 1.2 0.028 14.3 0.0 1.9 2 0 0 2 2 2 0 TMEM154 protein family OAD_gamma PF04277.13 ORF16500 - 0.063 13.9 0.0 0.14 12.8 0.0 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain TMEM154 PF15102.6 ORF151625 - 0.018 15.0 1.2 0.028 14.3 0.0 1.9 2 0 0 2 2 2 0 TMEM154 protein family OAD_gamma PF04277.13 ORF151625 - 0.063 13.9 0.0 0.14 12.8 0.0 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain EF-hand_7 PF13499.6 ORF143649 - 5.1e-22 78.1 9.2 3.5e-12 46.6 0.4 4.2 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF143649 - 8.6e-20 68.9 11.1 1.7e-05 24.4 0.1 5.8 5 0 0 5 5 5 4 EF-hand domain EF-hand_1 PF00036.32 ORF143649 - 8.7e-20 68.7 13.3 1.2e-06 27.6 0.1 5.8 6 0 0 6 6 6 4 EF hand EF-hand_5 PF13202.6 ORF143649 - 2.6e-14 52.0 11.4 0.0002 20.7 0.1 5.5 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF143649 - 4.8e-11 42.3 2.3 2e-09 37.1 0.3 5.0 4 1 1 5 5 5 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF143649 - 0.00028 20.8 1.5 0.002 18.1 0.3 3.0 2 1 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand Jag_N PF14804.6 ORF143649 - 0.059 13.7 0.1 0.29 11.5 0.1 2.2 2 0 0 2 2 1 0 Jag N-terminus RST PF12174.8 ORF143649 - 0.066 13.1 0.2 1.8 8.5 0.0 3.1 2 0 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain SPARC_Ca_bdg PF10591.9 ORF143649 - 0.071 13.4 0.3 18 5.7 0.0 3.3 3 1 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF143649 - 0.073 13.9 1.8 0.35 11.8 0.2 3.0 3 1 0 3 3 2 0 EF-hand domain EF-hand_9 PF14658.6 ORF143649 - 0.084 13.2 0.1 15 6.0 0.0 3.6 3 1 0 3 3 2 0 EF-hand domain TERF2_RBM PF16772.5 ORF143649 - 0.23 10.9 0.8 1.1 8.7 0.0 2.6 3 0 0 3 3 3 0 Telomeric repeat-binding factor 2 Rap1-binding motif EF-hand_10 PF14788.6 ORF143649 - 0.24 11.3 2.3 5.8 6.9 0.4 2.9 2 0 0 2 2 2 0 EF hand CTK3_C PF12350.8 ORF143649 - 0.42 10.8 1.6 2.9 8.1 1.0 2.7 2 1 0 2 2 2 0 CTD kinase subunit gamma CTK3 C-terminus UPF0223 PF05256.12 ORF143649 - 1.9 8.9 5.5 2.1 8.7 0.1 3.5 5 0 0 5 5 3 0 Uncharacterised protein family (UPF0223) EF-hand_14 PF17959.1 ORF143649 - 1.9 8.9 4.2 11 6.4 0.1 4.0 4 1 1 5 5 5 0 EF-hand domain LRR_4 PF12799.7 ORF129642 - 1.3e-20 73.1 49.1 8.3e-08 32.4 1.9 6.5 4 1 4 8 8 8 6 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF129642 - 4.9e-16 58.7 18.1 1.3e-05 24.8 6.0 4.1 2 1 2 4 4 4 4 Leucine-rich repeat LRR_8 PF13855.6 ORF129642 - 2.6e-15 55.9 24.0 4.1e-06 26.5 6.4 6.0 4 1 0 5 5 5 3 Leucine rich repeat LRR_6 PF13516.6 ORF129642 - 0.028 14.4 17.8 13 6.2 0.0 6.4 7 0 0 7 7 7 0 Leucine Rich repeat LRR_1 PF00560.33 ORF129642 - 1 10.2 22.6 13 6.8 0.2 7.6 8 2 0 8 8 8 0 Leucine Rich Repeat TMEM154 PF15102.6 ORF125793 - 0.018 15.0 1.2 0.028 14.3 0.0 1.9 2 0 0 2 2 2 0 TMEM154 protein family OAD_gamma PF04277.13 ORF125793 - 0.063 13.9 0.0 0.14 12.8 0.0 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain EF-hand_6 PF13405.6 ORF119557 - 1.6e-20 71.2 0.0 4.2e-05 23.1 0.0 4.6 4 0 0 4 4 4 4 EF-hand domain EF-hand_1 PF00036.32 ORF119557 - 3e-20 70.2 0.0 1e-05 24.7 0.1 4.5 4 0 0 4 4 4 4 EF hand EF-hand_5 PF13202.6 ORF119557 - 5.4e-16 57.3 0.5 0.0023 17.4 0.0 4.6 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF119557 - 1e-14 54.7 0.0 8.1e-07 29.4 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF119557 - 1.2e-08 34.7 0.0 0.12 12.2 0.1 4.0 3 1 1 4 4 4 3 EF-hand domain pair Tektin PF03148.14 ORF119557 - 2.7e-05 23.1 24.5 0.00026 19.9 24.4 2.3 1 1 0 1 1 1 1 Tektin family T2SSE_N PF05157.15 ORF119557 - 0.005 17.1 0.9 0.29 11.4 0.7 2.9 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein E, N-terminal domain DUF3584 PF12128.8 ORF119557 - 0.093 10.2 14.8 1.7 6.1 17.9 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) DUF2935 PF11155.8 ORF119557 - 0.99 9.8 3.9 0.73 10.2 1.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) DUF1664 PF07889.12 ORF119557 - 1.9 8.5 11.3 2.8 8.0 2.8 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DRY_EERY PF09750.9 ORF119557 - 2.6 8.3 5.9 0.77 10.0 2.3 1.9 1 1 1 2 2 2 0 Alternative splicing regulator TMEM154 PF15102.6 ORF112871 - 0.018 15.0 1.2 0.028 14.3 0.0 1.9 2 0 0 2 2 2 0 TMEM154 protein family OAD_gamma PF04277.13 ORF112871 - 0.063 13.9 0.0 0.14 12.8 0.0 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Pkinase PF00069.25 ORF104116 - 1.1e-34 120.1 0.6 1.5e-34 119.5 0.6 1.2 1 0 0 1 1 1 1 Protein kinase domain Kelch_1 PF01344.25 ORF104116 - 4.2e-19 67.8 8.3 1e-09 37.8 0.6 3.9 4 0 0 4 4 4 3 Kelch motif Pkinase_Tyr PF07714.17 ORF104116 - 1.3e-18 67.3 0.1 1.9e-18 66.7 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kelch_6 PF13964.6 ORF104116 - 4.6e-17 61.6 4.3 9.6e-06 25.7 0.0 4.5 3 1 1 4 4 4 2 Kelch motif Kelch_4 PF13418.6 ORF104116 - 3.5e-11 42.9 0.6 3.2e-05 23.8 0.0 4.2 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF104116 - 7.8e-08 32.1 0.4 0.7 10.0 0.4 3.6 3 0 0 3 3 3 3 Kelch motif Kelch_2 PF07646.15 ORF104116 - 1.1e-07 31.6 4.2 0.001 19.0 0.1 4.0 4 0 0 4 4 4 2 Kelch motif Kinase-like PF14531.6 ORF104116 - 4.6e-07 29.4 0.0 8.2e-06 25.3 0.0 2.2 1 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF104116 - 0.00025 20.4 0.0 0.00045 19.6 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF104116 - 0.0016 18.4 0.0 0.0025 17.8 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kelch_3 PF13415.6 ORF104116 - 0.015 15.6 1.8 2.8 8.3 0.0 3.6 4 1 0 4 4 4 0 Galactose oxidase, central domain HATPase_c PF02518.26 ORF38019 - 8.2e-22 77.8 2.8 1.9e-21 76.6 0.4 2.3 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF38019 - 5.1e-09 36.0 0.4 3.1e-08 33.5 0.4 2.3 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF38019 - 0.046 13.6 1.5 0.085 12.7 0.0 2.2 2 1 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ANTH PF07651.16 ORF142696 - 6.2e-11 41.8 10.3 9.2e-11 41.3 10.3 1.2 1 0 0 1 1 1 1 ANTH domain Pkinase PF00069.25 ORF83424 - 1.9e-67 227.4 0.0 2.9e-67 226.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83424 - 1.7e-30 106.1 0.0 2.5e-30 105.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF83424 - 2.3e-09 36.9 0.4 1.1e-07 31.4 0.0 2.5 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF83424 - 3.1e-07 29.4 0.0 0.00016 21.0 0.0 3.1 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF83424 - 5.1e-07 30.0 0.8 0.00018 21.9 0.1 2.5 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF83424 - 5.1e-05 22.9 5.0 0.00034 20.3 0.0 3.2 4 0 0 4 4 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF83424 - 0.0026 17.2 0.5 0.0083 15.6 0.1 2.1 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF83424 - 0.018 14.9 0.0 0.42 10.5 0.0 2.6 2 0 0 2 2 2 0 EF-hand domain pair APH PF01636.23 ORF83424 - 0.029 14.3 1.8 0.039 13.9 0.0 2.1 3 0 0 3 3 3 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF83424 - 0.086 12.4 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase DUF1752 PF08550.10 ORF83424 - 0.086 12.7 8.8 0.69 9.8 0.6 2.7 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF1752) EF-hand_9 PF14658.6 ORF83424 - 0.14 12.5 0.0 0.43 10.9 0.0 1.8 1 0 0 1 1 1 0 EF-hand domain Dapper PF15268.6 ORF58489 - 1.2 7.9 20.2 1.9 7.2 20.2 1.2 1 0 0 1 1 1 0 Dapper ABC_tran PF00005.27 ORF26952 - 5.9e-51 172.6 3.3 2.8e-25 89.4 0.0 3.7 4 0 0 4 4 3 2 ABC transporter ABC_tran_Xtn PF12848.7 ORF26952 - 1.1e-28 99.1 4.4 1.1e-28 99.1 4.4 2.7 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF26952 - 1.8e-15 57.5 13.9 0.0013 18.6 0.4 4.3 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF26952 - 2.8e-09 36.7 0.7 0.025 14.0 0.0 4.3 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF26952 - 3.1e-08 33.7 0.2 0.0007 19.7 0.0 3.2 3 1 0 3 3 2 2 50S ribosome-binding GTPase ABC_tran_CTD PF16326.5 ORF26952 - 2.1e-07 31.1 10.9 2.1e-07 31.1 10.9 3.7 3 1 1 4 4 4 1 ABC transporter C-terminal domain AAA_29 PF13555.6 ORF26952 - 2.8e-06 27.0 1.2 0.036 13.8 0.1 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF26952 - 1.6e-05 24.9 1.5 0.078 12.9 0.1 2.7 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 ORF26952 - 2.3e-05 24.8 12.8 0.00018 21.9 0.2 3.6 2 2 0 3 3 2 2 AAA ATPase domain AAA_18 PF13238.6 ORF26952 - 4.5e-05 24.0 1.7 0.46 11.0 0.0 3.7 4 1 0 4 4 3 2 AAA domain Dynamin_N PF00350.23 ORF26952 - 0.00015 21.9 0.7 0.11 12.5 0.0 3.9 4 0 0 4 4 4 1 Dynamin family KAP_NTPase PF07693.14 ORF26952 - 0.00064 19.0 3.7 0.052 12.8 0.3 2.7 2 2 0 2 2 2 2 KAP family P-loop domain DUF815 PF05673.13 ORF26952 - 0.00068 18.9 1.0 1.8 7.7 0.0 3.5 2 1 1 3 3 3 1 Protein of unknown function (DUF815) RNA_helicase PF00910.22 ORF26952 - 0.00077 19.8 0.4 1.3 9.4 0.0 2.6 2 0 0 2 2 2 1 RNA helicase AAA_28 PF13521.6 ORF26952 - 0.0013 19.0 2.3 1.3 9.2 0.0 3.5 3 0 0 3 3 3 1 AAA domain NB-ARC PF00931.22 ORF26952 - 0.0021 17.3 0.0 0.3 10.3 0.0 2.6 2 0 0 2 2 2 1 NB-ARC domain NACHT PF05729.12 ORF26952 - 0.0025 17.7 3.3 0.55 10.1 0.2 3.0 3 0 0 3 3 3 1 NACHT domain AAA_22 PF13401.6 ORF26952 - 0.0028 17.9 2.1 5.5 7.3 0.2 3.6 3 0 0 3 3 3 0 AAA domain Zeta_toxin PF06414.12 ORF26952 - 0.0033 16.7 1.1 1 8.6 0.1 2.7 2 0 0 2 2 2 1 Zeta toxin AAA PF00004.29 ORF26952 - 0.0035 17.8 0.1 4.3 7.8 0.0 2.9 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) ATP-synt_ab PF00006.25 ORF26952 - 0.004 16.8 0.4 0.18 11.4 0.0 2.5 3 0 0 3 3 2 1 ATP synthase alpha/beta family, nucleotide-binding domain MeaB PF03308.16 ORF26952 - 0.0063 15.5 9.8 0.21 10.6 0.1 3.2 3 0 0 3 3 3 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Val_tRNA-synt_C PF10458.9 ORF26952 - 0.0071 16.6 4.6 0.0071 16.6 4.6 2.9 3 2 0 3 3 2 1 Valyl tRNA synthetase tRNA binding arm AAA_24 PF13479.6 ORF26952 - 0.013 15.2 1.9 2.8 7.6 0.1 2.7 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 ORF26952 - 0.039 13.7 1.2 4.9 6.9 0.2 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_30 PF13604.6 ORF26952 - 0.039 13.7 4.2 4.9 6.8 0.1 3.3 3 1 0 3 3 2 0 AAA domain AAA_25 PF13481.6 ORF26952 - 0.04 13.5 4.0 2.6 7.6 0.0 3.5 4 1 0 4 4 4 0 AAA domain NTPase_1 PF03266.15 ORF26952 - 0.04 13.8 0.7 9.8 6.1 0.1 2.7 2 0 0 2 2 2 0 NTPase FliD_N PF02465.18 ORF26952 - 0.043 14.5 0.6 0.043 14.5 0.6 2.6 2 1 0 2 2 1 0 Flagellar hook-associated protein 2 N-terminus AAA_15 PF13175.6 ORF26952 - 0.062 13.0 0.1 0.062 13.0 0.1 4.5 4 1 1 5 5 5 0 AAA ATPase domain MobB PF03205.14 ORF26952 - 0.079 12.9 0.9 12 5.8 0.1 2.5 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B SbcCD_C PF13558.6 ORF26952 - 0.083 13.1 2.5 1.2 9.4 0.1 3.8 3 2 0 3 3 2 0 Putative exonuclease SbcCD, C subunit DUF812 PF05667.11 ORF26952 - 0.09 11.6 13.7 0.029 13.3 6.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF812) Roc PF08477.13 ORF26952 - 0.1 12.8 1.6 14 6.0 0.1 3.0 3 0 0 3 3 2 0 Ras of Complex, Roc, domain of DAPkinase Rad17 PF03215.15 ORF26952 - 0.11 12.4 0.2 21 5.0 0.0 2.8 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_23 PF13476.6 ORF26952 - 0.14 12.6 0.1 0.14 12.6 0.1 4.3 3 1 0 3 3 3 0 AAA domain DUF87 PF01935.17 ORF26952 - 0.15 12.1 12.1 0.68 10.0 0.1 3.7 4 0 0 4 4 4 0 Helicase HerA, central domain FeoB_N PF02421.18 ORF26952 - 0.17 11.4 0.1 20 4.7 0.1 2.5 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA_13 PF13166.6 ORF26952 - 0.17 10.5 16.9 0.98 8.0 6.0 3.7 4 0 0 4 4 4 0 AAA domain DUF1192 PF06698.11 ORF26952 - 0.18 11.9 14.2 3.8 7.6 7.7 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) CLP1_P PF16575.5 ORF26952 - 0.2 11.4 0.5 24 4.6 0.1 2.8 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_5 PF07728.14 ORF26952 - 0.22 11.5 1.9 7.7 6.5 0.1 2.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF2730 PF10805.8 ORF26952 - 0.65 10.1 4.8 0.28 11.3 1.3 2.2 2 0 0 2 2 1 0 Protein of unknown function (DUF2730) Phlebovirus_NSM PF07246.11 ORF26952 - 0.94 8.8 4.0 1.6 8.0 4.0 1.3 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M DUF3287 PF11690.8 ORF26952 - 1 9.1 6.4 0.17 11.6 1.1 2.3 3 0 0 3 3 2 0 Protein of unknown function (DUF3287) AAA_33 PF13671.6 ORF26952 - 1.6 8.9 7.8 8.3 6.6 0.0 3.6 4 1 0 4 4 2 0 AAA domain dNK PF01712.19 ORF26952 - 1.6 8.6 5.8 20 5.0 0.0 3.2 3 0 0 3 3 3 0 Deoxynucleoside kinase MCU PF04678.13 ORF26952 - 3.7 7.6 6.7 3.3 7.8 1.7 2.4 2 0 0 2 2 2 0 Mitochondrial calcium uniporter SLX9 PF15341.6 ORF26952 - 7.1 7.0 13.8 1.3 9.4 8.5 2.1 2 0 0 2 2 2 0 Ribosome biogenesis protein SLX9 Bax1-I PF01027.20 ORF26827 - 0.0078 16.1 4.1 0.043 13.6 0.0 2.8 3 0 0 3 3 3 1 Inhibitor of apoptosis-promoting Bax1 7TMR-DISM_7TM PF07695.11 ORF26827 - 0.019 14.9 4.6 0.085 12.7 0.3 2.4 2 0 0 2 2 2 0 7TM diverse intracellular signalling DMT_YdcZ PF04657.13 ORF26827 - 0.89 9.8 6.4 0.51 10.6 0.1 2.7 3 0 0 3 3 3 0 Putative inner membrane exporter, YdcZ ABC_tran PF00005.27 ORF18393 - 2.2e-31 109.2 0.0 5.6e-31 107.9 0.0 1.7 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF18393 - 8.3e-26 91.2 6.6 1.5e-25 90.4 6.6 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF18393 - 2.1e-07 30.6 0.0 5e-07 29.4 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF18393 - 0.00038 20.9 0.4 0.0018 18.7 0.4 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF18393 - 0.0054 17.0 0.2 0.084 13.2 0.0 2.3 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF18393 - 0.0054 15.9 0.0 0.0097 15.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) SbcCD_C PF13558.6 ORF18393 - 0.012 15.8 0.4 0.16 12.3 0.4 2.6 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 ORF18393 - 0.02 14.8 0.3 0.089 12.7 0.1 2.0 2 0 0 2 2 2 0 RsgA GTPase AAA_25 PF13481.6 ORF18393 - 0.059 12.9 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF18393 - 0.068 12.9 0.1 0.16 11.8 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 ORF18393 - 0.071 13.5 0.0 8.9 6.7 0.0 2.4 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 ORF18393 - 0.079 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 ORF18393 - 0.13 12.8 0.0 1 9.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF18393 - 0.14 12.1 0.1 0.7 9.9 0.1 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) FAD_binding_1 PF00667.20 ORF5559 - 8.7e-33 113.7 0.0 6.9e-32 110.8 0.0 2.1 1 1 0 1 1 1 1 FAD binding domain Flavodoxin_1 PF00258.25 ORF5559 - 5.5e-30 104.5 1.5 1.3e-29 103.2 1.5 1.7 1 0 0 1 1 1 1 Flavodoxin NAD_binding_1 PF00175.21 ORF5559 - 1.5e-14 54.6 0.0 4.3e-14 53.1 0.0 1.9 2 0 0 2 2 2 1 Oxidoreductase NAD-binding domain CooT PF10133.9 ORF5559 - 0.15 12.4 0.9 0.36 11.1 0.1 2.0 2 0 0 2 2 2 0 CO dehydrogenase accessory protein CooT FAD_binding_1 PF00667.20 ORF49578 - 8.7e-33 113.7 0.0 6.9e-32 110.8 0.0 2.1 1 1 0 1 1 1 1 FAD binding domain Flavodoxin_1 PF00258.25 ORF49578 - 5.5e-30 104.5 1.5 1.3e-29 103.2 1.5 1.7 1 0 0 1 1 1 1 Flavodoxin NAD_binding_1 PF00175.21 ORF49578 - 1.5e-14 54.6 0.0 4.3e-14 53.1 0.0 1.9 2 0 0 2 2 2 1 Oxidoreductase NAD-binding domain CooT PF10133.9 ORF49578 - 0.15 12.4 0.9 0.36 11.1 0.1 2.0 2 0 0 2 2 2 0 CO dehydrogenase accessory protein CooT cNMP_binding PF00027.29 ORF139380 - 1.3e-05 25.1 0.1 2.8e-05 24.1 0.1 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain VHS PF00790.19 ORF128207 - 7.9e-08 32.2 4.2 1.6e-07 31.3 0.5 2.8 2 1 0 2 2 2 1 VHS domain Carboxyl_trans PF01039.22 ORF128207 - 0.37 9.4 4.2 0.61 8.6 4.2 1.3 1 0 0 1 1 1 0 Carboxyl transferase domain Pkinase PF00069.25 ORF114316 - 5e-66 222.8 0.7 1e-65 221.8 0.0 1.8 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF114316 - 4.7e-34 117.8 0.0 7.4e-34 117.2 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase GerA PF03323.13 ORF114316 - 0.026 13.0 0.8 0.041 12.3 0.8 1.2 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein Kdo PF06293.14 ORF114316 - 0.074 12.4 0.1 0.16 11.3 0.1 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF3496 PF12001.8 ORF114316 - 1.1 9.6 6.8 7.9 6.9 0.1 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF3496) FAD_binding_1 PF00667.20 ORF104791 - 8.7e-33 113.7 0.0 6.9e-32 110.8 0.0 2.1 1 1 0 1 1 1 1 FAD binding domain Flavodoxin_1 PF00258.25 ORF104791 - 5.5e-30 104.5 1.5 1.3e-29 103.2 1.5 1.7 1 0 0 1 1 1 1 Flavodoxin NAD_binding_1 PF00175.21 ORF104791 - 1.5e-14 54.6 0.0 4.3e-14 53.1 0.0 1.9 2 0 0 2 2 2 1 Oxidoreductase NAD-binding domain CooT PF10133.9 ORF104791 - 0.15 12.4 0.9 0.36 11.1 0.1 2.0 2 0 0 2 2 2 0 CO dehydrogenase accessory protein CooT C2 PF00168.30 ORF96185 - 4.4e-22 78.3 0.1 1.2e-12 48.0 0.0 3.3 2 1 1 3 3 3 2 C2 domain Ferlin_C PF16165.5 ORF96185 - 1.5e-05 25.0 0.0 0.00072 19.5 0.0 2.5 2 0 0 2 2 2 1 Ferlin C-terminus DUF3568 PF12092.8 ORF96185 - 0.27 11.3 3.6 0.39 10.8 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3568) UCH PF00443.29 ORF48540 - 9.7e-43 146.5 5.0 9.7e-43 146.5 5.0 2.1 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF48540 - 3.3e-07 30.2 11.7 1.1e-05 25.2 11.7 2.7 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase SMI1_KNR4 PF09346.10 ORF48540 - 0.0085 16.5 0.3 0.08 13.3 0.2 2.6 2 2 0 2 2 2 1 SMI1 / KNR4 family (SUKH-1) HSCB_C PF07743.13 ORF48540 - 0.35 11.4 12.0 0.049 14.1 4.8 3.1 3 0 0 3 3 3 0 HSCB C-terminal oligomerisation domain DUF4228 PF14009.6 ORF48540 - 3.7 7.9 7.0 5 7.5 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4228) Adaptin_N PF01602.20 ORF132485 - 4e-43 147.8 2.2 6.8e-43 147.0 2.2 1.3 1 0 0 1 1 1 1 Adaptin N terminal region B2-adapt-app_C PF09066.10 ORF132485 - 1.2e-18 67.2 0.4 3.3e-18 65.8 0.3 1.8 2 0 0 2 2 2 1 Beta2-adaptin appendage, C-terminal sub-domain Cnd1 PF12717.7 ORF132485 - 6.1e-16 58.9 1.2 7.2e-12 45.6 0.0 2.7 2 0 0 2 2 2 2 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 ORF132485 - 0.034 14.4 0.1 3 8.3 0.0 3.3 3 0 0 3 3 3 0 HEAT repeat HEAT_2 PF13646.6 ORF132485 - 0.075 13.4 0.0 17 5.9 0.0 3.2 3 0 0 3 3 3 0 HEAT repeats SeleniumBinding PF11524.8 ORF132485 - 0.26 11.8 1.7 1.4 9.4 0.1 2.6 2 0 0 2 2 2 0 Selenium binding protein Peptidase_S10 PF00450.22 ORF96500 - 2.7e-83 280.7 0.2 2.7e-83 280.7 0.2 1.6 2 0 0 2 2 2 1 Serine carboxypeptidase EGF_Tenascin PF18720.1 ORF96500 - 5.6e-05 23.1 5.9 0.00013 21.9 5.9 1.6 1 0 0 1 1 1 1 Tenascin EGF domain EGF_2 PF07974.13 ORF96500 - 9.3e-05 22.7 16.3 9.3e-05 22.7 16.3 2.5 1 1 1 2 2 2 1 EGF-like domain Orf78 PF06024.12 ORF96500 - 0.0055 17.0 0.6 0.014 15.7 0.6 1.6 1 0 0 1 1 1 1 Orf78 (ac78) TssO PF17561.2 ORF96500 - 0.0068 16.5 1.9 0.016 15.3 1.9 1.6 1 0 0 1 1 1 1 Type VI secretion system, TssO RIFIN PF02009.16 ORF96500 - 0.01 15.8 1.8 0.01 15.8 1.8 1.6 2 0 0 2 2 2 0 Rifin Baculo_11_kDa PF06143.11 ORF96500 - 0.021 14.4 0.6 0.062 12.9 0.6 1.7 1 0 0 1 1 1 0 Baculovirus 11 kDa family SieB PF14163.6 ORF96500 - 0.029 13.9 1.4 0.066 12.7 1.4 1.5 1 0 0 1 1 1 0 Super-infection exclusion protein B hEGF PF12661.7 ORF96500 - 0.039 14.6 8.4 0.039 14.6 8.4 2.6 2 0 0 2 2 2 0 Human growth factor-like EGF MRAP PF15183.6 ORF96500 - 0.096 12.6 0.2 0.28 11.2 0.2 1.8 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Sigma_reg_N PF13800.6 ORF96500 - 0.12 12.7 1.3 0.26 11.6 1.3 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal EGF PF00008.27 ORF96500 - 0.28 11.5 12.6 0.11 12.9 9.5 2.0 2 0 0 2 2 2 0 EGF-like domain EB PF01683.18 ORF96500 - 0.85 10.0 14.5 2.1 8.7 14.5 1.6 1 0 0 1 1 1 0 EB module Peptidase_S10 PF00450.22 ORF72846 - 1.6e-83 281.5 0.2 1.6e-83 281.5 0.2 1.6 2 0 0 2 2 2 1 Serine carboxypeptidase EGF_Tenascin PF18720.1 ORF72846 - 5.6e-05 23.1 5.9 0.00013 21.9 5.9 1.6 1 0 0 1 1 1 1 Tenascin EGF domain EGF_2 PF07974.13 ORF72846 - 9.3e-05 22.7 16.3 9.3e-05 22.7 16.3 2.5 1 1 1 2 2 2 1 EGF-like domain Orf78 PF06024.12 ORF72846 - 0.0055 17.0 0.6 0.014 15.7 0.6 1.6 1 0 0 1 1 1 1 Orf78 (ac78) TssO PF17561.2 ORF72846 - 0.0068 16.5 1.9 0.016 15.3 1.9 1.6 1 0 0 1 1 1 1 Type VI secretion system, TssO RIFIN PF02009.16 ORF72846 - 0.01 15.8 1.8 0.01 15.8 1.8 1.6 2 0 0 2 2 2 0 Rifin Baculo_11_kDa PF06143.11 ORF72846 - 0.021 14.4 0.6 0.062 12.9 0.6 1.7 1 0 0 1 1 1 0 Baculovirus 11 kDa family SieB PF14163.6 ORF72846 - 0.029 13.9 1.4 0.066 12.7 1.4 1.5 1 0 0 1 1 1 0 Super-infection exclusion protein B hEGF PF12661.7 ORF72846 - 0.039 14.6 8.4 0.039 14.6 8.4 2.6 2 0 0 2 2 2 0 Human growth factor-like EGF MRAP PF15183.6 ORF72846 - 0.096 12.6 0.2 0.28 11.2 0.2 1.8 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Sigma_reg_N PF13800.6 ORF72846 - 0.12 12.7 1.3 0.26 11.6 1.3 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal EGF PF00008.27 ORF72846 - 0.28 11.5 12.6 0.11 12.9 9.5 2.0 2 0 0 2 2 2 0 EGF-like domain EB PF01683.18 ORF72846 - 0.85 10.0 14.5 2.1 8.7 14.5 1.6 1 0 0 1 1 1 0 EB module PI3_PI4_kinase PF00454.27 ORF56094 - 1.5e-67 228.1 0.2 1.5e-67 228.1 0.2 2.0 2 1 1 3 3 3 1 Phosphatidylinositol 3- and 4-kinase FRB_dom PF08771.11 ORF56094 - 2.8e-26 91.8 1.6 2.8e-26 91.8 1.6 2.5 3 0 0 3 3 3 1 FKBP12-rapamycin binding domain FATC PF02260.20 ORF56094 - 2.4e-17 62.4 0.1 9.5e-17 60.5 0.0 2.2 2 0 0 2 2 2 1 FATC domain DUF3102 PF11300.8 ORF56094 - 0.02 15.2 2.0 0.02 15.2 2.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3102) DUF4065 PF13274.6 ORF56094 - 8.4 7.3 7.2 8.3 7.3 0.5 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF4065) KCT2 PF17818.1 ORF46092 - 0.031 14.4 1.7 0.045 13.9 0.3 2.0 2 0 0 2 2 2 0 Keratinocyte-associated gene product Peptidase_C97 PF05903.14 ORF129235 - 3e-35 121.3 0.0 8.8e-35 119.8 0.0 1.8 1 0 0 1 1 1 1 PPPDE putative peptidase domain Thioredoxin PF00085.20 ORF129235 - 6.1e-18 64.7 0.1 1.7e-17 63.3 0.1 1.8 1 0 0 1 1 1 1 Thioredoxin PUL PF08324.11 ORF129235 - 4.4e-11 42.5 0.0 7.1e-11 41.9 0.0 1.3 1 0 0 1 1 1 1 PUL domain OST3_OST6 PF04756.13 ORF129235 - 1.6e-06 27.7 0.0 2.8e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF129235 - 0.00094 19.6 1.3 0.0037 17.7 0.1 2.6 2 0 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 ORF129235 - 0.0011 19.0 0.0 0.005 16.9 0.0 2.2 1 0 0 1 1 1 1 Thioredoxin domain Redoxin PF08534.10 ORF129235 - 0.0034 17.1 0.1 0.012 15.3 0.1 1.9 1 1 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 ORF129235 - 0.011 16.1 0.8 0.16 12.3 0.0 2.9 2 1 1 3 3 3 0 Thioredoxin-like REC1 PF18501.1 ORF129235 - 0.026 14.4 1.9 0.058 13.3 1.9 1.6 1 0 0 1 1 1 0 Alpha helical recognition lobe domain Glutaredoxin PF00462.24 ORF129235 - 0.032 14.4 0.2 0.36 11.1 0.0 2.5 2 0 0 2 2 2 0 Glutaredoxin TraF PF13728.6 ORF129235 - 0.06 13.2 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 F plasmid transfer operon protein PTS_EIIA_2 PF00359.22 ORF149026 - 5.4e-33 113.9 0.0 9.2e-33 113.2 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PTS_EIIC PF02378.18 ORF149026 - 2.2e-20 73.0 32.7 2.2e-20 73.0 32.7 3.0 2 1 0 2 2 2 1 Phosphotransferase system, EIIC PTS_IIB PF02302.17 ORF149026 - 1.1e-09 38.8 0.0 3.3e-09 37.3 0.0 1.8 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit PPR_2 PF13041.6 ORF138964 - 2.6e-57 190.8 5.6 7.1e-13 48.5 0.0 8.4 1 1 8 9 9 9 7 PPR repeat family PPR PF01535.20 ORF138964 - 4e-51 167.8 6.8 5.7e-07 29.4 0.0 9.6 9 0 0 9 9 9 9 PPR repeat PPR_3 PF13812.6 ORF138964 - 4.5e-46 154.8 0.7 2.6e-11 43.4 0.0 5.9 2 1 5 7 7 7 6 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF138964 - 1.7e-45 152.4 1.3 8.6e-09 34.9 0.0 9.4 9 0 0 9 9 9 8 PPR repeat PPR_long PF17177.4 ORF138964 - 7.1e-32 110.5 1.0 2.3e-18 66.3 0.2 3.6 1 1 2 3 3 3 3 Pentacotripeptide-repeat region of PRORP ATP13 PF12921.7 ORF138964 - 4.2e-05 23.4 0.0 0.72 9.7 0.0 4.3 4 1 1 5 5 5 2 Mitochondrial ATPase expression TPR_19 PF14559.6 ORF138964 - 0.0097 16.4 0.1 1.9 9.1 0.0 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat T4SS-DNA_transf PF02534.14 ORF138964 - 0.015 14.1 0.0 0.024 13.5 0.0 1.3 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer MRP-S27 PF10037.9 ORF138964 - 0.21 10.4 1.8 9.7 4.9 0.0 3.3 4 1 1 5 5 5 0 Mitochondrial 28S ribosomal protein S27 Clathrin PF00637.20 ORF136876 - 1.7e-12 47.4 32.0 0.0003 20.7 0.9 8.3 2 2 6 8 8 8 6 Region in Clathrin and VPS TPR_2 PF07719.17 ORF136876 - 1.1e-10 40.7 28.7 0.0018 18.2 0.8 9.6 9 1 1 10 10 9 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF136876 - 1.3e-07 31.7 23.6 0.0036 17.5 0.8 8.3 5 1 3 9 9 9 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_1 PF00515.28 ORF136876 - 2.1e-05 24.1 32.1 0.0092 15.8 0.7 8.4 10 0 0 10 10 9 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF136876 - 0.00011 22.7 20.2 2.4 9.2 0.0 9.1 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF136876 - 0.00014 21.6 17.5 0.55 10.4 0.5 7.7 8 1 0 8 8 7 2 Tetratricopeptide repeat RPN7 PF10602.9 ORF136876 - 0.0071 16.1 15.5 0.2 11.3 0.3 6.0 6 1 0 6 6 6 2 26S proteasome subunit RPN7 TPR_4 PF07721.14 ORF136876 - 0.0086 16.6 1.2 14 6.6 0.0 4.8 5 0 0 5 5 3 0 Tetratricopeptide repeat T2SSF PF00482.23 ORF136876 - 0.014 15.4 1.6 6.2 6.8 0.0 4.3 4 1 0 4 4 4 0 Type II secretion system (T2SS), protein F Mic1 PF07035.12 ORF136876 - 0.021 14.5 0.3 0.021 14.5 0.3 5.4 4 3 1 6 6 6 0 Colon cancer-associated protein Mic1-like DUF3856 PF12968.7 ORF136876 - 0.025 14.7 3.2 4.7 7.3 0.5 4.4 2 1 0 3 3 3 0 Domain of Unknown Function (DUF3856) RNA_pol_inhib PF16857.5 ORF136876 - 0.028 14.2 1.9 0.098 12.5 0.2 2.9 3 0 0 3 3 3 0 RNA polymerase inhibitor DUF2624 PF11116.8 ORF136876 - 0.032 15.1 0.1 0.17 12.8 0.1 2.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2624) TPR_8 PF13181.6 ORF136876 - 0.036 14.3 29.9 0.26 11.6 0.7 8.0 9 1 0 9 9 7 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF136876 - 0.043 14.1 0.7 0.043 14.1 0.7 7.7 9 2 0 9 9 6 0 Tetratricopeptide repeat Ank_5 PF13857.6 ORF136876 - 0.21 12.0 2.8 2.1 8.8 0.0 3.8 5 0 0 5 5 4 0 Ankyrin repeats (many copies) TPR_19 PF14559.6 ORF136876 - 0.39 11.2 30.0 0.71 10.4 0.7 9.1 7 4 3 10 10 10 0 Tetratricopeptide repeat MIT PF04212.18 ORF136876 - 0.86 9.7 28.9 2.3 8.3 1.1 6.4 6 1 0 6 6 6 0 MIT (microtubule interacting and transport) domain TPR_11 PF13414.6 ORF136876 - 0.97 9.2 18.6 16 5.3 0.3 6.6 6 1 1 7 7 7 0 TPR repeat Sel1 PF08238.12 ORF136876 - 2.3 9.0 5.6 27 5.6 0.1 4.1 4 0 0 4 4 3 0 Sel1 repeat TPR_17 PF13431.6 ORF136876 - 2.9 8.5 6.4 54 4.5 0.0 4.8 5 0 0 5 5 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF136876 - 7 7.4 16.2 1.5 9.6 0.1 5.9 8 0 0 8 8 6 0 Tetratricopeptide repeat PPR_2 PF13041.6 ORF136876 - 10 6.4 10.3 8.5 6.7 0.0 5.8 7 1 1 8 8 5 0 PPR repeat family cNMP_binding PF00027.29 ORF47332 - 1.6e-12 47.3 0.0 3.4e-12 46.3 0.0 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Corona_nucleoca PF00937.18 ORF47332 - 1.9 7.5 5.8 3.1 6.7 5.8 1.3 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Tir_receptor_C PF07489.11 ORF47332 - 1.9 8.4 6.8 9.6 6.1 4.2 2.5 2 0 0 2 2 2 0 Translocated intimin receptor (Tir) C-terminus FA_desaturase PF00487.24 ORF1723 - 4.7e-37 128.2 23.7 4.7e-37 128.2 23.7 2.1 1 1 1 2 2 2 1 Fatty acid desaturase Cyt-b5 PF00173.28 ORF1723 - 2.9e-15 56.2 0.1 7.3e-15 54.9 0.1 1.7 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FixQ PF05545.11 ORF106811 - 0.26 11.3 1.3 0.67 10.0 1.3 1.7 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Phospholip_B PF04916.13 ORF100982 - 3.2e-145 484.7 1.7 4.1e-145 484.4 1.7 1.0 1 0 0 1 1 1 1 Phospholipase B Kelch_4 PF13418.6 ORF85159 - 7.6e-16 57.9 2.7 3.6e-08 33.3 0.0 4.1 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF85159 - 7.5e-14 51.6 7.5 0.00014 22.1 0.1 4.6 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF85159 - 1.7e-10 40.6 7.1 0.00016 21.6 0.0 3.8 4 0 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 ORF85159 - 0.037 14.3 2.9 2.1 8.7 0.1 3.6 3 0 0 3 3 3 0 Kelch motif FA_desaturase PF00487.24 ORF85159 - 1.7 8.4 9.8 0.35 10.6 3.3 2.6 3 0 0 3 3 3 0 Fatty acid desaturase Tubulin PF00091.25 ORF73483 - 1.5e-20 74.2 0.0 2.2e-20 73.7 0.0 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF73483 - 2.5e-08 34.2 0.0 2.4e-07 31.0 0.0 2.1 2 0 0 2 2 2 1 Tubulin C-terminal domain mRNA_decap_C PF16741.5 ORF73483 - 0.053 12.8 0.2 0.13 11.6 0.2 1.6 1 0 0 1 1 1 0 mRNA-decapping enzyme C-terminus PARP PF00644.20 ORF104928 - 1.6e-13 50.7 0.1 2.9e-13 49.9 0.1 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain ARTD15_N PF18084.1 ORF104928 - 0.0001 22.5 0.0 0.0013 18.9 0.0 2.3 1 1 0 1 1 1 1 ARTD15 N-terminal domain PTS_2-RNA PF01885.16 ORF104928 - 0.18 11.9 0.0 0.41 10.7 0.0 1.5 1 1 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family ATG16 PF08614.11 ORF58400 - 0.0036 17.6 22.6 0.0036 17.6 22.6 5.4 1 1 4 5 5 5 2 Autophagy protein 16 (ATG16) Fmp27_SW PF10305.9 ORF58400 - 1.3 9.8 8.6 1.4 9.6 0.6 3.7 3 0 0 3 3 3 0 RNA pol II promoter Fmp27 protein domain AAA_13 PF13166.6 ORF58400 - 4 6.0 74.3 0.14 10.8 29.5 3.6 1 1 2 3 3 3 0 AAA domain FPP PF05911.11 ORF58400 - 4.8 5.2 74.1 1.7 6.7 55.7 2.4 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil PhaG_MnhG_YufB PF03334.14 ORF2826 - 0.49 10.7 7.4 0.45 10.8 4.9 2.1 2 0 0 2 2 2 0 Na+/H+ antiporter subunit Pkinase PF00069.25 ORF142389 - 1.9e-50 171.7 0.0 2.5e-50 171.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF142389 - 4.4e-24 85.2 0.0 6.5e-24 84.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase cNMP_binding PF00027.29 ORF142389 - 5.9e-21 74.3 0.0 1.3e-15 57.2 0.0 3.5 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain Kinase-like PF14531.6 ORF142389 - 0.047 13.0 0.0 0.12 11.6 0.0 1.6 2 0 0 2 2 2 0 Kinase-like Alpha-amylase PF00128.24 ORF102400 - 1.5e-12 47.8 0.0 2.7e-12 46.9 0.0 1.3 1 0 0 1 1 1 1 Alpha amylase, catalytic domain B12-binding PF02310.19 ORF102400 - 0.088 12.8 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain ABC2_membrane PF01061.24 ORF93853 - 1.2e-39 135.9 21.9 1.2e-39 135.9 21.9 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC_tran PF00005.27 ORF93853 - 1.6e-25 90.2 0.1 3e-25 89.3 0.1 1.4 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 ORF93853 - 0.00028 21.2 0.0 0.00079 19.7 0.0 1.8 2 0 0 2 2 1 1 AAA domain AAA_21 PF13304.6 ORF93853 - 0.00057 19.8 1.4 0.72 9.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF93853 - 0.00065 19.6 0.0 0.0012 18.7 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase ABC2_membrane_3 PF12698.7 ORF93853 - 0.0021 17.2 30.6 0.0073 15.4 30.4 2.1 1 1 0 1 1 1 1 ABC-2 family transporter protein MMR_HSR1 PF01926.23 ORF93853 - 0.0046 17.0 0.1 0.0087 16.1 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_16 PF13191.6 ORF93853 - 0.0095 16.3 0.0 0.017 15.5 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 ORF93853 - 0.013 14.9 0.1 0.029 13.8 0.1 1.5 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF93853 - 0.035 13.8 0.1 0.082 12.7 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain cobW PF02492.19 ORF93853 - 0.051 13.2 0.1 0.087 12.4 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 ORF93853 - 0.085 13.1 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 ORF93853 - 0.087 12.9 0.2 0.087 12.9 0.2 1.7 2 0 0 2 2 1 0 Dynamin family AAA_18 PF13238.6 ORF93853 - 0.1 13.2 0.0 0.24 11.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain FCH PF00611.23 ORF93853 - 0.12 12.7 0.0 0.23 11.8 0.0 1.4 1 0 0 1 1 1 0 Fes/CIP4, and EFC/F-BAR homology domain ATPase_2 PF01637.18 ORF93853 - 0.12 12.3 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea MobB PF03205.14 ORF93853 - 0.12 12.3 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_25 PF13481.6 ORF93853 - 0.26 10.9 0.1 0.48 10.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF93853 - 0.64 10.5 2.5 0.81 10.1 0.2 2.2 3 0 0 3 3 3 0 AAA domain DUF5305 PF17231.2 ORF83602 - 0.051 13.0 0.1 0.051 13.0 0.1 3.1 4 1 0 4 4 4 0 Family of unknown function (DUF5305) Saf_2TM PF18303.1 ORF83602 - 0.45 10.1 4.9 0.69 9.5 0.8 2.8 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain IBR PF01485.21 ORF83602 - 2.6 8.3 5.1 6 7.2 5.1 1.6 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain ABC_membrane PF00664.23 ORF79062 - 3.9e-46 157.9 11.0 5.4e-46 157.4 11.0 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF79062 - 5.2e-33 114.5 2.4 2.5e-32 112.2 0.1 2.4 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF79062 - 2.6e-08 33.6 1.6 3.5e-06 26.6 1.6 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF79062 - 0.00021 20.9 0.9 0.0016 18.1 0.0 2.3 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF79062 - 0.00027 21.2 0.0 0.006 16.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF79062 - 0.00079 19.9 0.1 0.0024 18.3 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF79062 - 0.0009 19.2 0.0 0.25 11.3 0.0 2.5 2 0 0 2 2 2 1 RsgA GTPase AAA_15 PF13175.6 ORF79062 - 0.001 18.9 0.2 0.001 18.9 0.2 2.3 3 0 0 3 3 3 1 AAA ATPase domain DUF815 PF05673.13 ORF79062 - 0.0014 17.8 0.0 0.0026 17.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) DUF87 PF01935.17 ORF79062 - 0.0048 17.0 0.0 0.016 15.3 0.0 1.8 2 0 0 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF79062 - 0.0065 15.7 0.0 0.011 14.9 0.0 1.4 1 0 0 1 1 1 1 G-protein alpha subunit AAA_18 PF13238.6 ORF79062 - 0.01 16.4 0.3 0.11 13.0 0.3 2.7 1 1 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 ORF79062 - 0.028 13.8 0.0 0.057 12.8 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family SbcCD_C PF13558.6 ORF79062 - 0.029 14.6 2.6 0.12 12.6 0.4 2.7 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_7 PF12775.7 ORF79062 - 0.03 13.8 0.0 0.11 12.0 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_5 PF07728.14 ORF79062 - 0.037 14.0 0.0 0.3 11.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_21 PF13304.6 ORF79062 - 0.069 12.9 0.2 0.42 10.4 0.0 2.3 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system TauE PF01925.19 ORF79062 - 0.3 10.7 0.1 0.3 10.7 0.1 2.8 3 0 0 3 3 3 0 Sulfite exporter TauE/SafE DUF4131 PF13567.6 ORF79062 - 1.2 8.8 3.1 16 5.1 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Baculo_PEP_C PF04513.12 ORF50929 - 3.3e-07 30.4 25.5 0.00048 20.2 7.7 2.9 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus Vip3A_N PF12495.8 ORF50929 - 0.049 13.5 17.2 0.79 9.6 2.8 3.1 1 1 2 3 3 3 0 Vegetative insecticide protein 3A N terminal CdvA PF18822.1 ORF50929 - 0.14 12.0 29.8 0.23 11.3 2.5 4.7 1 1 5 6 6 6 0 CdvA-like coiled-coil domain DUF1729 PF08354.10 ORF50929 - 0.98 8.3 6.4 0.85 8.5 3.8 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF1729) Apolipoprotein PF01442.18 ORF50929 - 1.2 9.0 31.8 0.59 10.0 24.8 2.5 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain YfkD PF14167.6 ORF50929 - 1.5 7.9 8.2 0.61 9.2 0.8 2.4 1 1 0 2 2 2 0 YfkD-like protein DUF1759 PF03564.15 ORF50929 - 1.6 8.7 12.9 5.9 6.8 1.0 3.4 1 1 1 3 3 3 0 Protein of unknown function (DUF1759) DUF1664 PF07889.12 ORF50929 - 4 7.5 30.7 6 6.9 10.0 3.9 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) Gp-FAR-1 PF05823.12 ORF50929 - 5.1 7.4 18.1 1.4 9.2 5.0 2.7 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Caldesmon PF02029.15 ORF50929 - 6.9 5.3 23.5 35 3.0 23.5 1.9 1 1 0 1 1 1 0 Caldesmon EF-hand_7 PF13499.6 ORF88644 - 9.3e-09 35.6 10.7 1.9e-06 28.2 3.9 4.1 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF88644 - 1.3e-06 27.6 2.8 0.00012 21.5 0.4 4.0 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF88644 - 3.2e-06 26.6 14.4 0.0039 17.0 0.9 6.4 6 1 1 7 7 7 3 EF-hand domain EF-hand_1 PF00036.32 ORF88644 - 2.7e-05 23.4 20.7 0.00069 19.0 1.0 5.6 5 1 1 6 6 6 3 EF hand EF-hand_8 PF13833.6 ORF88644 - 0.00043 20.1 3.5 0.00043 20.1 3.5 4.0 3 1 1 4 4 4 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF88644 - 0.24 11.4 9.3 0.51 10.3 0.6 3.4 1 1 2 3 3 3 0 Cytoskeletal-regulatory complex EF hand RST PF12174.8 ORF88644 - 0.99 9.4 7.7 2 8.4 0.1 3.9 4 0 0 4 4 4 0 RCD1-SRO-TAF4 (RST) plant domain Ntox44 PF15607.6 ORF84182 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 Sulfatase PF00884.23 ORF71758 - 6.9e-35 120.9 0.1 9e-35 120.5 0.1 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF71758 - 0.0052 16.4 0.0 0.011 15.4 0.0 1.5 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase GCS2 PF04107.13 ORF71758 - 0.041 13.2 0.0 0.095 12.0 0.0 1.6 2 0 0 2 2 2 0 Glutamate-cysteine ligase family 2(GCS2) DUF4976 PF16347.5 ORF71758 - 0.081 13.2 0.0 0.23 11.8 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) AMP-binding PF00501.28 ORF57650 - 6.1e-89 298.5 0.0 7.5e-89 298.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF57650 - 7.2e-15 55.7 0.7 1.9e-14 54.4 0.2 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain CH PF00307.31 ORF41337 - 8e-69 228.7 6.3 1.8e-17 63.5 0.0 4.3 4 0 0 4 4 4 4 Calponin homology (CH) domain EF-hand_7 PF13499.6 ORF41337 - 5.3e-11 42.8 1.2 2.3e-10 40.8 1.2 2.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF41337 - 5e-08 32.3 1.0 6.1e-05 22.6 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain CAMSAP_CH PF11971.8 ORF41337 - 9.9e-08 31.7 0.1 0.041 13.7 0.0 4.2 5 0 0 5 5 5 2 CAMSAP CH domain EF-hand_1 PF00036.32 ORF41337 - 1e-06 27.8 0.7 0.0078 15.7 0.0 2.9 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF41337 - 2.3e-06 27.4 0.4 9.5e-06 25.4 0.4 2.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_9 PF14658.6 ORF41337 - 8e-05 22.9 0.7 0.00017 21.9 0.1 1.9 2 0 0 2 2 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF41337 - 0.00027 20.3 0.4 0.011 15.2 0.0 2.9 2 0 0 2 2 2 1 EF hand SPARC_Ca_bdg PF10591.9 ORF41337 - 0.0044 17.3 0.1 0.015 15.6 0.1 1.9 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region CH_2 PF06294.11 ORF41337 - 0.0055 16.8 0.2 7.4 6.8 0.0 3.7 5 0 0 5 5 5 1 CH-like domain in sperm protein DUF5011 PF16403.5 ORF41337 - 0.093 12.9 1.0 0.72 10.0 0.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5011) eIF2A PF08662.11 ORF37703 - 1.6e-57 194.5 0.2 1.7e-52 178.2 0.1 2.8 1 1 2 3 3 3 2 Eukaryotic translation initiation factor eIF2A WD40 PF00400.32 ORF37703 - 0.0013 19.5 0.1 15 6.7 0.0 4.7 4 0 0 4 4 4 1 WD domain, G-beta repeat Ntox44 PF15607.6 ORF36165 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 FAD_binding_2 PF00890.24 ORF35147 - 1.7e-121 406.2 2.4 2.2e-121 405.9 2.4 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 ORF35147 - 1.2e-42 144.9 0.4 1.7e-42 144.4 0.4 1.2 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 ORF35147 - 5.9e-05 22.4 0.1 0.00086 18.6 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF35147 - 7.5e-05 22.0 3.6 0.03 13.4 2.5 2.3 2 0 0 2 2 2 2 Glucose inhibited division protein A Thi4 PF01946.17 ORF35147 - 0.00063 19.0 0.3 0.055 12.7 0.1 2.5 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 ORF35147 - 0.0016 17.8 0.8 0.0092 15.3 0.2 2.2 2 0 0 2 2 2 1 FAD binding domain DAO PF01266.24 ORF35147 - 0.0028 17.3 0.4 0.0079 15.8 0.4 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF35147 - 0.012 14.6 0.0 0.02 14.0 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein HI0933_like PF03486.14 ORF35147 - 0.096 11.4 0.5 0.37 9.5 0.3 1.9 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox_3 PF13738.6 ORF35147 - 0.58 9.4 2.9 3.8 6.7 0.9 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Ntox44 PF15607.6 ORF30433 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 Proton_antipo_M PF00361.20 ORF27226 - 3.1e-99 331.9 24.2 3.1e-99 331.9 24.2 2.4 1 1 1 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 ORF27226 - 2.1e-23 82.1 3.3 2.1e-23 82.1 3.3 3.1 2 0 0 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Pkinase PF00069.25 ORF152859 - 1e-34 120.1 0.6 1.5e-34 119.6 0.6 1.2 1 0 0 1 1 1 1 Protein kinase domain Kelch_1 PF01344.25 ORF152859 - 4e-19 67.9 8.3 1e-09 37.8 0.6 3.9 4 0 0 4 4 4 3 Kelch motif Pkinase_Tyr PF07714.17 ORF152859 - 1.2e-18 67.3 0.1 1.8e-18 66.8 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kelch_6 PF13964.6 ORF152859 - 4.5e-17 61.7 4.3 9.3e-06 25.7 0.0 4.4 3 1 1 4 4 4 2 Kelch motif Kelch_4 PF13418.6 ORF152859 - 3.3e-11 43.0 0.6 3.1e-05 23.9 0.0 4.2 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF152859 - 7.3e-08 32.2 0.4 0.68 10.0 0.4 3.6 3 0 0 3 3 3 3 Kelch motif Kelch_2 PF07646.15 ORF152859 - 1e-07 31.7 4.2 0.001 19.0 0.1 4.0 4 0 0 4 4 4 2 Kelch motif Kinase-like PF14531.6 ORF152859 - 4.3e-07 29.5 0.0 7.9e-06 25.4 0.0 2.2 1 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF152859 - 0.00025 20.5 0.0 0.00044 19.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF152859 - 0.0016 18.4 0.0 0.0025 17.8 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kelch_3 PF13415.6 ORF152859 - 0.014 15.6 1.8 2.8 8.3 0.0 3.5 4 1 0 4 4 4 0 Galactose oxidase, central domain Ntox44 PF15607.6 ORF132342 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 P53_C PF11619.8 ORF127280 - 0.13 12.3 0.7 0.97 9.5 0.0 2.7 2 0 0 2 2 2 0 Transcription factor P53 - C terminal domain PapD-like PF14874.6 ORF127280 - 0.15 12.2 0.0 0.39 10.9 0.0 1.7 1 0 0 1 1 1 0 Flagellar-associated PapD-like TTL PF03133.15 ORF12140 - 1.7e-81 273.6 4.3 1.7e-81 273.6 4.3 1.7 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_ST PF14397.6 ORF12140 - 1.7e-06 27.5 0.0 0.0041 16.4 0.0 2.4 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 ORF12140 - 1.1e-05 24.8 0.1 0.016 14.5 0.0 2.8 2 0 0 2 2 2 2 YheC/D like ATP-grasp ATP-grasp_3 PF02655.14 ORF12140 - 0.0014 18.7 0.2 0.2 11.7 0.0 3.2 3 1 0 3 3 3 1 ATP-grasp domain RimK PF08443.11 ORF12140 - 0.0058 16.2 0.0 3.1 7.4 0.0 2.7 2 0 0 2 2 2 2 RimK-like ATP-grasp domain Ntox44 PF15607.6 ORF103209 - 0.045 14.1 1.1 0.19 12.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial toxin 44 Ion_trans PF00520.31 ORF98715 - 3.7e-11 42.7 34.7 6.5e-11 41.9 34.7 1.4 1 0 0 1 1 1 1 Ion transport protein Sec62 PF03839.16 ORF98715 - 4e-05 23.2 8.8 4e-05 23.2 8.8 3.1 3 0 0 3 3 3 1 Translocation protein Sec62 Flp1_like PF16982.5 ORF98715 - 0.86 9.0 6.1 0.33 10.4 2.3 2.3 2 0 0 2 2 2 0 Putative Flagellin, Flp1-like, domain PKD_channel PF08016.12 ORF98715 - 1 7.9 38.5 0.015 14.0 7.6 3.2 2 1 1 3 3 3 0 Polycystin cation channel CDC45 PF02724.14 ORF98715 - 1 7.5 28.4 1.8 6.8 28.4 1.2 1 0 0 1 1 1 0 CDC45-like protein DUF913 PF06025.12 ORF98715 - 3.5 6.5 10.1 7.3 5.5 10.1 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Peptidase_M1 PF01433.20 ORF89159 - 1.9e-43 148.6 0.8 3.4e-43 147.7 0.8 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF89159 - 2.4e-24 86.5 1.1 4.1e-24 85.8 1.1 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF89159 - 3.8e-19 68.8 0.0 2.7e-18 66.1 0.0 2.5 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_MA_2 PF13485.6 ORF89159 - 0.062 13.0 0.6 0.31 10.7 0.6 1.9 1 1 0 1 1 1 0 Peptidase MA superfamily NatB_MDM20 PF09797.9 ORF89159 - 0.065 12.2 0.2 0.12 11.3 0.2 1.3 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit Cullin PF00888.22 ORF78032 - 2.3e-133 446.0 20.5 2.3e-133 446.0 20.5 1.9 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF78032 - 6.2e-23 80.6 7.0 1.1e-22 79.8 4.7 2.6 2 0 0 2 2 2 1 Cullin protein neddylation domain HTH_27 PF13463.6 ORF78032 - 0.095 13.2 0.1 1.7 9.2 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain Mad3_BUB1_I PF08311.12 ORF78032 - 0.29 11.1 4.2 0.16 12.0 0.4 2.6 3 0 0 3 3 3 0 Mad3/BUB1 homology region 1 RabGAP-TBC PF00566.18 ORF69031 - 1.7e-45 155.3 1.8 1.7e-45 155.3 1.8 2.8 3 1 0 3 3 3 1 Rab-GTPase-TBC domain Ndufs5 PF10200.9 ORF69031 - 0.07 13.4 1.9 0.84 9.9 0.7 2.9 2 0 0 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa DUF3223 PF11523.8 ORF69031 - 0.079 13.8 1.1 0.24 12.3 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3223) Ion_trans PF00520.31 ORF50309 - 3.4e-11 42.9 34.7 6.5e-11 41.9 34.7 1.5 1 0 0 1 1 1 1 Ion transport protein Sec62 PF03839.16 ORF50309 - 4e-05 23.2 8.8 4e-05 23.2 8.8 3.2 3 0 0 3 3 3 1 Translocation protein Sec62 SLC12 PF03522.15 ORF50309 - 0.002 17.2 7.6 0.002 17.2 7.6 1.8 2 0 0 2 2 2 1 Solute carrier family 12 Spo0A_C PF08769.11 ORF50309 - 0.067 13.3 0.5 0.19 11.8 0.5 1.7 1 0 0 1 1 1 0 Sporulation initiation factor Spo0A C terminal CDC45 PF02724.14 ORF50309 - 0.99 7.6 28.4 1.8 6.8 28.4 1.3 1 0 0 1 1 1 0 CDC45-like protein PKD_channel PF08016.12 ORF50309 - 1 7.9 38.5 0.015 14.0 7.6 3.1 2 1 1 3 3 3 0 Polycystin cation channel DUF913 PF06025.12 ORF50309 - 2.9 6.8 10.1 7.3 5.5 10.1 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Vfa1 PF08432.10 ORF50309 - 7 6.9 39.6 0.11 12.8 29.5 2.2 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 Peptidase_M1 PF01433.20 ORF125755 - 1.9e-43 148.6 0.8 3.4e-43 147.7 0.8 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF125755 - 2.4e-24 86.5 1.1 4.1e-24 85.8 1.1 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF125755 - 3.8e-19 68.8 0.0 2.7e-18 66.1 0.0 2.5 2 0 0 2 2 2 1 Leukotriene A4 hydrolase, C-terminal Peptidase_MA_2 PF13485.6 ORF125755 - 0.062 13.0 0.6 0.31 10.7 0.6 1.9 1 1 0 1 1 1 0 Peptidase MA superfamily NatB_MDM20 PF09797.9 ORF125755 - 0.065 12.2 0.2 0.12 11.3 0.2 1.3 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit ARL2_Bind_BART PF11527.8 ORF121263 - 4.2e-30 104.2 0.9 4.2e-30 104.2 0.9 3.8 3 2 0 3 3 3 2 The ARF-like 2 binding protein BART PARP PF00644.20 ORF11978 - 0.007 16.0 3.8 0.007 16.0 3.8 4.3 5 1 0 5 5 5 3 Poly(ADP-ribose) polymerase catalytic domain Exo_endo_phos PF03372.23 ORF97822 - 5.5e-06 26.1 0.0 4.3e-05 23.1 0.0 2.2 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family 2-oxoacid_dh PF00198.23 ORF9156 - 2.1e-79 266.2 0.0 2.9e-79 265.8 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 ORF9156 - 6.3e-67 221.4 35.3 6.9e-23 80.3 5.6 3.4 3 0 0 3 3 3 3 Biotin-requiring enzyme E3_binding PF02817.17 ORF9156 - 7.7e-16 58.2 0.1 2.5e-15 56.5 0.1 2.0 1 0 0 1 1 1 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 ORF9156 - 3.3e-15 55.6 17.8 0.0025 17.6 0.0 6.6 6 0 0 6 6 6 5 Biotin-lipoyl like RnfC_N PF13375.6 ORF9156 - 3.1e-12 46.3 15.5 0.00038 20.4 0.8 4.7 3 2 1 4 4 4 3 RnfC Barrel sandwich hybrid domain GCV_H PF01597.19 ORF9156 - 3.9e-10 39.7 19.0 0.00073 19.4 1.3 3.5 3 0 0 3 3 3 3 Glycine cleavage H-protein HlyD_D23 PF16576.5 ORF9156 - 3.4e-06 26.4 11.0 0.21 10.8 0.1 5.3 3 3 3 6 6 6 3 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQRA PF05896.11 ORF9156 - 1e-05 25.1 13.9 0.17 11.3 0.7 3.9 1 1 2 3 3 3 3 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PYNP_C PF07831.13 ORF9156 - 5.4e-05 22.8 13.5 13 5.6 0.1 6.3 4 2 1 6 6 6 0 Pyrimidine nucleoside phosphorylase C-terminal domain PTS_EIIA_1 PF00358.20 ORF9156 - 0.0002 21.1 14.4 5.2 6.9 0.2 6.1 3 3 3 6 6 6 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HlyD_3 PF13437.6 ORF9156 - 0.00081 20.1 16.5 0.49 11.1 0.1 5.9 4 3 3 7 7 6 2 HlyD family secretion protein RNA_pol_inhib PF16857.5 ORF9156 - 0.009 15.8 0.4 29 4.5 0.0 3.7 3 0 0 3 3 3 0 RNA polymerase inhibitor Adeno_knob PF00541.17 ORF9156 - 0.01 15.6 0.0 36 4.0 0.0 3.2 3 0 0 3 3 3 0 Adenoviral fibre protein (knob domain) QRPTase_N PF02749.16 ORF9156 - 0.034 14.2 8.8 5.2 7.2 0.2 4.6 5 1 0 5 5 5 0 Quinolinate phosphoribosyl transferase, N-terminal domain DUF2118 PF09891.9 ORF9156 - 0.17 11.8 7.8 5.8 6.9 0.4 3.7 3 1 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2118) DUF3597 PF12200.8 ORF9156 - 0.45 11.0 17.4 5.4 7.6 1.6 3.7 3 0 0 3 3 3 0 Domain of unknown function (DUF3597) DEC-1_N PF04625.13 ORF9156 - 0.76 8.7 19.0 0.09 11.8 2.3 3.0 3 0 0 3 3 3 0 DEC-1 protein, N-terminal region Peptidase_M23 PF01551.22 ORF9156 - 4.6 7.5 14.2 1.1e+02 3.1 0.1 5.8 3 3 1 6 6 6 0 Peptidase family M23 Ion_trans PF00520.31 ORF77652 - 1.6e-23 83.2 10.9 2.3e-23 82.7 10.9 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF77652 - 2.6e-11 42.2 1.5 2.1e-05 23.7 0.2 2.9 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF77652 - 3.6e-10 38.9 0.4 0.00013 21.6 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF77652 - 2.3e-09 36.3 0.4 4.4e-05 22.8 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF77652 - 6.7e-09 36.1 2.6 7.7e-09 35.9 0.9 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF77652 - 5.1e-06 26.2 1.0 0.0028 17.5 0.2 2.8 2 0 0 2 2 2 2 EF-hand domain pair AIP3 PF03915.13 ORF77652 - 0.1 11.7 2.1 0.35 9.9 1.1 1.9 1 1 1 2 2 2 0 Actin interacting protein 3 Saccharop_dh_N PF04455.12 ORF77652 - 0.12 12.8 0.0 0.28 11.6 0.0 1.5 1 0 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region EF-hand_4 PF12763.7 ORF77652 - 0.22 11.5 0.8 1.6 8.7 0.1 2.4 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand DUF1772 PF08592.11 ORF72110 - 0.079 13.3 3.5 1.3 9.3 0.6 3.5 2 1 1 3 3 3 0 Domain of unknown function (DUF1772) Peptidase_C1 PF00112.23 ORF46388 - 6.5e-96 320.6 23.4 1.8e-52 178.6 8.4 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF46388 - 0.0062 15.4 10.2 0.012 14.4 0.5 3.0 3 0 0 3 3 3 2 Peptidase C1-like family NAD_Gly3P_dh_C PF07479.14 ORF32955 - 9.9e-68 226.9 0.0 1.3e-40 138.9 0.0 2.5 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 ORF32955 - 5.8e-53 179.1 0.7 5.4e-44 149.9 0.1 2.4 2 0 0 2 2 2 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Ribosomal_S5_C PF03719.15 ORF32955 - 0.0023 17.3 0.0 0.35 10.4 0.0 2.6 2 0 0 2 2 2 2 Ribosomal protein S5, C-terminal domain NinE PF05322.11 ORF32955 - 0.043 13.7 0.0 0.12 12.3 0.0 1.7 2 0 0 2 2 2 0 NINE Protein F420_oxidored PF03807.17 ORF32955 - 0.086 13.4 0.2 0.98 10.0 0.2 2.5 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DNA_gyraseB PF00204.25 ORF27276 - 2.1e-39 134.8 0.0 3.9e-39 133.9 0.0 1.4 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 ORF27276 - 4.5e-25 87.6 1.6 9.6e-25 86.5 1.6 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 ORF27276 - 1.1e-16 61.3 0.1 2.1e-16 60.4 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 ORF27276 - 2.6e-11 43.7 0.0 4.7e-11 42.8 0.0 1.5 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 ORF27276 - 0.0011 18.8 0.1 0.0023 17.8 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPRIM_C PF16898.5 ORF27276 - 0.0041 17.4 0.1 0.0081 16.4 0.1 1.4 1 0 0 1 1 1 1 C-terminal associated domain of TOPRIM Na_H_antiporter PF03553.14 ORF25106 - 5.6e-46 157.2 14.3 2.2e-32 112.5 7.7 2.2 2 0 0 2 2 2 2 Na+/H+ antiporter family Peptidase_C1 PF00112.23 ORF131868 - 6.5e-96 320.6 23.4 1.8e-52 178.6 8.4 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF131868 - 0.0062 15.4 10.2 0.012 14.4 0.5 3.0 3 0 0 3 3 3 2 Peptidase C1-like family DUF4446 PF14584.6 ORF123423 - 0.071 13.1 0.1 12 5.8 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) UPF0242 PF06785.11 ORF123423 - 0.63 10.1 8.3 1.5 8.9 0.6 3.3 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus OST-HTH PF12872.7 ORF121615 - 0.029 14.2 0.0 0.063 13.1 0.0 1.5 1 0 0 1 1 1 0 OST-HTH/LOTUS domain KxDL PF10241.9 ORF71987 - 7.8e-05 22.9 2.0 7.8e-05 22.9 2.0 4.9 5 0 0 5 5 5 2 Uncharacterized conserved protein Osmo_CC PF08946.10 ORF71987 - 0.00046 20.4 15.7 0.1 12.9 1.9 4.7 4 0 0 4 4 4 2 Osmosensory transporter coiled coil TMF_DNA_bd PF12329.8 ORF71987 - 0.002 18.1 10.3 0.002 18.1 10.3 7.2 5 3 2 7 7 7 1 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 ORF71987 - 0.73 10.1 13.8 9.8 6.5 2.8 4.9 2 1 3 5 5 5 0 Bacterial protein of unknown function (DUF948) DASH_Dam1 PF08653.10 ORF71987 - 1.2 9.0 7.8 5.7 6.8 0.0 4.3 4 1 0 4 4 4 0 DASH complex subunit Dam1 MCPsignal PF00015.21 ORF71987 - 2.2 8.1 15.7 3 7.6 0.0 4.5 3 1 2 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF2209 PF09974.9 ORF71987 - 6.5 7.1 8.4 0.34 11.3 0.6 2.7 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2209) MerR-DNA-bind PF09278.11 ORF71987 - 8.8 7.0 12.5 21 5.7 0.1 5.1 6 0 0 6 6 6 0 MerR, DNA binding Peptidase_C2 PF00648.21 ORF55010 - 6e-65 219.2 0.0 8.5e-65 218.7 0.0 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease zf-CCHC PF00098.23 ORF55010 - 5.7e-09 35.6 0.8 1.6e-08 34.2 0.8 1.8 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_5 PF14787.6 ORF55010 - 0.051 13.3 0.4 0.14 11.9 0.4 1.7 1 0 0 1 1 1 0 GAG-polyprotein viral zinc-finger zf-CCHC_2 PF13696.6 ORF55010 - 0.39 10.6 1.7 1.2 9.1 1.7 1.8 1 0 0 1 1 1 0 Zinc knuckle NAGLU PF05089.12 ORF34780 - 0.11 11.5 0.2 0.35 9.8 0.0 1.8 2 0 0 2 2 2 0 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain GIDA PF01134.22 ORF13411 - 3.5e-170 566.3 0.0 4.6e-170 565.9 0.0 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A GIDA_assoc PF13932.6 ORF13411 - 1.8e-79 266.8 0.3 2.6e-79 266.3 0.3 1.2 1 0 0 1 1 1 1 GidA associated domain FAD_oxidored PF12831.7 ORF13411 - 1.1e-07 31.7 3.4 2.1e-07 30.7 3.4 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF13411 - 2.3e-07 30.3 4.4 0.00027 20.1 0.7 2.3 2 0 0 2 2 2 2 FAD binding domain Pyr_redox_2 PF07992.14 ORF13411 - 4.2e-05 22.9 1.4 9.5e-05 21.8 1.4 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF13411 - 0.0002 20.2 3.8 0.0036 16.1 0.4 2.9 3 0 0 3 3 3 1 HI0933-like protein AlaDh_PNT_C PF01262.21 ORF13411 - 0.00034 20.0 2.1 0.00087 18.6 1.6 2.1 2 1 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 ORF13411 - 0.0012 18.5 2.1 0.78 9.3 0.0 2.5 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 ORF13411 - 0.0064 15.8 2.0 0.062 12.5 2.0 2.2 1 1 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 ORF13411 - 0.011 16.3 0.2 0.037 14.6 0.2 2.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MarR_2 PF12802.7 ORF13411 - 0.015 15.2 0.2 0.43 10.5 0.0 2.8 3 0 0 3 3 3 0 MarR family NAD_binding_9 PF13454.6 ORF13411 - 0.49 10.4 4.0 0.2 11.6 0.3 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding FAD_binding_3 PF01494.19 ORF13411 - 0.62 9.2 3.1 0.96 8.6 0.2 2.3 3 0 0 3 3 3 0 FAD binding domain CHAT PF12770.7 ORF110331 - 2.4e-40 138.8 0.3 2.7e-27 96.0 0.2 2.2 2 0 0 2 2 2 2 CHAT domain ZZ PF00569.17 ORF110331 - 4.3e-11 42.4 23.3 1.6e-09 37.4 7.5 2.4 2 0 0 2 2 2 2 Zinc finger, ZZ type zf-B_box PF00643.24 ORF110331 - 0.13 12.4 18.1 0.51 10.5 7.3 2.4 2 0 0 2 2 2 0 B-box zinc finger C1_2 PF03107.16 ORF110331 - 4 7.8 30.8 2.1 8.7 9.2 2.6 2 0 0 2 2 2 0 C1 domain WD40 PF00400.32 ORF105437 - 1.9e-18 66.5 16.3 0.00065 20.5 0.4 10.2 10 0 0 10 10 10 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF105437 - 1.4e-16 60.5 0.0 0.00047 20.4 0.0 7.4 5 2 1 7 7 7 2 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF105437 - 2.5e-07 30.3 2.5 0.037 13.4 1.1 4.2 2 1 2 4 4 4 3 WD40-like domain PQQ_3 PF13570.6 ORF105437 - 0.0019 18.6 1.2 16 6.2 0.0 4.8 5 0 0 5 5 5 2 PQQ-like domain Kelch_6 PF13964.6 ORF105437 - 0.05 13.9 0.1 9.9 6.6 0.0 3.7 2 0 0 2 2 2 0 Kelch motif TPK_B1_binding PF04265.14 ORF105437 - 0.058 13.1 1.1 0.49 10.1 0.1 2.8 3 0 0 3 3 3 0 Thiamin pyrophosphokinase, vitamin B1 binding domain RRM_2 PF04059.12 ORF77001 - 2.2e-16 59.9 0.0 1.5e-15 57.1 0.0 2.1 2 0 0 2 2 2 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF77001 - 2.1e-08 33.9 0.1 3.6e-06 26.7 0.0 2.5 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Smg4_UPF3 PF03467.15 ORF77001 - 0.055 13.5 0.0 0.15 12.0 0.0 1.8 1 1 0 1 1 1 0 Smg-4/UPF3 family Metallophos PF00149.28 ORF71035 - 3.7e-12 47.2 6.7 6.9e-12 46.3 6.7 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Sec1 PF00995.23 ORF56736 - 1.1e-70 239.5 10.5 1.3e-70 239.3 10.5 1.0 1 0 0 1 1 1 1 Sec1 family XPG_I PF00867.18 ORF109527 - 1.5e-25 89.3 0.0 1.5e-25 89.3 0.0 4.1 6 0 0 6 6 6 1 XPG I-region 5_3_exonuc PF01367.20 ORF109527 - 4.6e-05 23.9 1.9 0.0001 22.8 0.0 2.6 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_2 PF12826.7 ORF109527 - 0.091 12.9 0.0 0.3 11.2 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix motif COMM_domain PF07258.14 ORF107323 - 0.014 15.5 3.2 0.1 12.7 0.4 3.2 2 0 0 2 2 2 0 COMM domain Chloroa_b-bind PF00504.21 ORF96957 - 7.5e-98 325.6 11.1 3e-34 118.9 0.1 4.0 4 0 0 4 4 4 3 Chlorophyll A-B binding protein Atu4866 PF11512.8 ORF96957 - 0.0095 16.3 0.2 11 6.5 0.0 2.9 3 0 0 3 3 3 2 Agrobacterium tumefaciens protein Atu4866 BtrH_N PF14399.6 ORF96957 - 0.0096 16.2 0.0 14 6.0 0.0 3.3 5 0 0 5 5 5 2 Butirosin biosynthesis protein H, N-terminal Yopt PF09467.10 ORF96957 - 0.034 14.2 0.0 14 5.8 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF96957 - 0.11 12.5 0.0 23 5.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal UPF0561 PF10573.9 ORF92239 - 0.68 10.1 7.9 0.48 10.5 5.3 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0561 FAM104 PF15434.6 ORF92239 - 4.7 7.8 10.1 0.4 11.3 4.6 2.0 2 0 0 2 2 2 0 Family 104 Exonuc_V_gamma PF04257.14 ORF64637 - 1.1e-100 338.0 0.4 4.2e-100 336.1 0.0 1.8 2 0 0 2 2 2 1 Exodeoxyribonuclease V, gamma subunit RecC_C PF17946.1 ORF64637 - 3.1e-66 223.0 2.0 5.9e-66 222.0 2.0 1.5 1 0 0 1 1 1 1 RecC C-terminal domain Acyl_transf_3 PF01757.22 ORF58435 - 2e-17 63.3 44.6 2e-17 63.3 44.6 1.8 2 0 0 2 2 2 1 Acyltransferase family WD40 PF00400.32 ORF54096 - 1.1e-32 111.5 20.5 0.00063 20.5 0.2 12.1 12 0 0 12 12 12 9 WD domain, G-beta repeat WD40_like PF17005.5 ORF54096 - 2e-10 40.5 6.3 0.034 13.5 0.1 4.1 3 1 1 4 4 4 4 WD40-like domain ANAPC4_WD40 PF12894.7 ORF54096 - 1.1e-08 35.2 1.6 0.11 12.8 0.0 6.7 3 3 3 7 7 7 2 Anaphase-promoting complex subunit 4 WD40 domain PQQ_2 PF13360.6 ORF54096 - 0.028 14.0 0.0 0.18 11.3 0.0 2.3 1 1 0 1 1 1 0 PQQ-like domain NIF PF03031.18 ORF49677 - 7e-49 165.6 0.6 7e-49 165.6 0.6 1.9 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase HAD PF12710.7 ORF49677 - 0.012 16.0 0.2 0.061 13.7 0.1 2.0 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase SapB_2 PF03489.17 ORF49677 - 0.091 12.9 0.1 1.6 8.9 0.0 2.9 3 0 0 3 3 3 0 Saposin-like type B, region 2 WD40 PF00400.32 ORF39933 - 1.1e-32 111.5 20.5 0.00063 20.5 0.2 12.1 12 0 0 12 12 12 9 WD domain, G-beta repeat WD40_like PF17005.5 ORF39933 - 2e-10 40.5 6.3 0.034 13.5 0.1 4.1 3 1 1 4 4 4 4 WD40-like domain ANAPC4_WD40 PF12894.7 ORF39933 - 1.1e-08 35.2 1.6 0.11 12.8 0.0 6.7 3 3 3 7 7 7 2 Anaphase-promoting complex subunit 4 WD40 domain PQQ_2 PF13360.6 ORF39933 - 0.028 14.0 0.0 0.18 11.3 0.0 2.3 1 1 0 1 1 1 0 PQQ-like domain Acyl_transf_3 PF01757.22 ORF30709 - 1.9e-17 63.4 44.7 1.9e-17 63.4 44.7 1.8 2 0 0 2 2 2 1 Acyltransferase family CitMHS PF03600.16 ORF30709 - 5.9 6.0 9.1 0.18 10.9 0.2 2.5 2 2 0 2 2 2 0 Citrate transporter EF-hand_6 PF13405.6 ORF145345 - 3.6e-12 45.2 2.9 0.046 13.7 0.0 5.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_1 PF00036.32 ORF145345 - 1e-09 37.2 5.2 0.29 10.8 0.0 5.6 5 1 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF145345 - 1.5e-09 38.1 1.8 0.0034 17.8 0.3 3.8 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF145345 - 9.2e-07 28.6 2.6 0.19 11.6 0.0 5.0 5 0 0 5 5 5 2 EF-hand domain pair DUF4476 PF14771.6 ORF145345 - 0.0002 21.6 0.1 0.00046 20.4 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4476) EF-hand_5 PF13202.6 ORF145345 - 0.0013 18.1 9.8 0.86 9.2 0.0 4.8 5 0 0 5 5 5 2 EF hand WD40 PF00400.32 ORF142865 - 1.1e-32 111.5 20.5 0.00063 20.5 0.2 12.1 12 0 0 12 12 12 9 WD domain, G-beta repeat WD40_like PF17005.5 ORF142865 - 2e-10 40.5 6.3 0.034 13.5 0.1 4.1 3 1 1 4 4 4 4 WD40-like domain ANAPC4_WD40 PF12894.7 ORF142865 - 1.1e-08 35.2 1.6 0.11 12.8 0.0 6.7 3 3 3 7 7 7 2 Anaphase-promoting complex subunit 4 WD40 domain PQQ_2 PF13360.6 ORF142865 - 0.028 14.0 0.0 0.18 11.3 0.0 2.3 1 1 0 1 1 1 0 PQQ-like domain Ank_2 PF12796.7 ORF122749 - 3.2e-16 59.7 1.3 2.3e-05 24.9 0.1 4.5 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF122749 - 5.2e-09 36.5 2.5 0.055 14.1 0.2 5.3 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF122749 - 3.9e-08 33.4 9.1 0.18 12.2 0.1 5.2 3 1 2 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF122749 - 5.2e-07 29.8 9.9 6.7 7.3 0.0 6.5 5 1 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF122749 - 6.3e-06 26.2 6.6 6.2 7.7 0.1 6.5 6 0 0 6 6 6 1 Ankyrin repeat HGTP_anticodon PF03129.20 ORF119710 - 8.8e-22 77.1 1.1 3.6e-21 75.1 0.1 2.3 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 ORF119710 - 4.9e-08 33.2 0.0 1.6e-07 31.5 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) RTX_C PF08339.10 ORF119710 - 0.078 13.0 0.2 0.19 11.8 0.0 1.6 2 0 0 2 2 2 0 RTX C-terminal domain Sigma70_r4 PF04545.16 ORF119710 - 0.18 11.4 0.4 28 4.3 0.0 2.8 2 0 0 2 2 2 0 Sigma-70, region 4 Rubis-subs-bind PF09273.11 ORF96625 - 1.4e-14 54.9 0.1 2.7e-14 54.0 0.1 1.5 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding SET PF00856.28 ORF96625 - 4.4e-14 53.2 0.1 1.2e-13 51.8 0.0 1.7 2 0 0 2 2 2 1 SET domain AP_endonuc_2 PF01261.24 ORF90808 - 5.5e-33 114.2 0.0 8e-33 113.6 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AAA PF00004.29 ORF83106 - 7e-37 126.8 0.0 1.5e-36 125.7 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF83106 - 7.9e-14 51.2 0.0 5.3e-13 48.5 0.0 2.6 1 1 0 1 1 1 1 AAA+ lid domain Vps4_C PF09336.10 ORF83106 - 1.6e-07 31.2 0.0 4.2e-07 29.9 0.0 1.8 1 0 0 1 1 1 1 Vps4 C terminal oligomerisation domain AAA_14 PF13173.6 ORF83106 - 5.5e-06 26.5 0.0 0.099 12.7 0.0 3.3 3 0 0 3 3 3 2 AAA domain AAA_2 PF07724.14 ORF83106 - 0.00012 22.3 0.0 0.00022 21.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 ORF83106 - 0.00026 21.0 0.8 0.0027 17.7 0.1 2.7 3 1 0 3 3 3 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF83106 - 0.00056 19.7 0.0 0.0013 18.5 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 ORF83106 - 0.0021 17.5 0.1 0.0037 16.7 0.1 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF83106 - 0.0034 16.6 0.0 0.0065 15.7 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_24 PF13479.6 ORF83106 - 0.0036 17.1 0.5 0.012 15.3 0.0 2.1 3 0 0 3 3 3 1 AAA domain AAA_22 PF13401.6 ORF83106 - 0.0042 17.4 0.1 0.012 15.8 0.1 1.8 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF83106 - 0.0059 16.4 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_16 PF13191.6 ORF83106 - 0.0084 16.5 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 ORF83106 - 0.01 16.3 0.5 0.039 14.5 0.0 2.4 3 0 0 3 3 2 0 AAA domain AAA_28 PF13521.6 ORF83106 - 0.016 15.4 0.0 0.051 13.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 ORF83106 - 0.027 14.0 0.2 0.23 11.0 0.1 2.2 2 1 0 2 2 2 0 P-loop containing dynein motor region AAA_33 PF13671.6 ORF83106 - 0.038 14.1 0.0 0.083 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF83106 - 0.075 13.4 0.8 0.44 11.0 0.2 2.7 2 1 0 2 2 1 0 RNA helicase AAA_25 PF13481.6 ORF83106 - 0.1 12.2 0.6 0.3 10.6 0.4 1.9 1 1 1 2 2 2 0 AAA domain NACHT PF05729.12 ORF83106 - 0.15 12.0 0.8 0.61 10.0 0.3 2.3 2 1 0 2 2 2 0 NACHT domain AAA_29 PF13555.6 ORF83106 - 0.16 11.7 0.0 0.33 10.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Viral_helicase1 PF01443.18 ORF83106 - 0.21 11.3 0.0 7.4 6.2 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 ORF83106 - 0.21 11.3 0.0 0.54 10.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain Aconitase PF00330.20 ORF54584 - 6e-98 328.8 0.0 7.9e-98 328.4 0.0 1.2 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 ORF54584 - 1.1e-40 139.0 0.0 1.7e-40 138.3 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain Fer2_4 PF13510.6 ORF54584 - 0.14 12.3 0.0 0.35 10.9 0.0 1.7 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain HSP90 PF00183.18 ORF28462 - 6.1e-235 781.0 30.3 7.7e-235 780.7 30.3 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF28462 - 0.097 12.6 1.0 0.37 10.7 0.1 2.2 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF28462 - 0.11 12.5 1.1 0.21 11.6 0.1 2.0 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF28462 - 0.77 9.7 2.8 29 4.7 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain Amidinotransf PF02274.17 ORF28462 - 7 5.6 9.1 0.53 9.3 0.1 2.2 2 0 0 2 2 2 0 Amidinotransferase UCH PF00443.29 ORF128483 - 9.2e-11 41.7 0.0 1.5e-10 41.0 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Metallophos PF00149.28 ORF118567 - 1.8e-13 51.5 1.1 3.7e-13 50.4 1.1 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase HSP90 PF00183.18 ORF112842 - 6.1e-235 781.0 30.3 7.7e-235 780.7 30.3 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF112842 - 0.097 12.6 1.0 0.37 10.7 0.1 2.2 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF112842 - 0.11 12.5 1.1 0.21 11.6 0.1 2.0 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF112842 - 0.77 9.7 2.8 29 4.7 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain Amidinotransf PF02274.17 ORF112842 - 7 5.6 9.1 0.53 9.3 0.1 2.2 2 0 0 2 2 2 0 Amidinotransferase Thioesterase PF00975.20 ORF96573 - 3.9e-13 50.0 0.1 9.6e-13 48.8 0.1 1.6 1 0 0 1 1 1 1 Thioesterase domain KAsynt_C_assoc PF16197.5 ORF96573 - 6.2e-08 33.1 0.0 3.7e-05 24.1 0.0 2.6 2 0 0 2 2 2 2 Ketoacyl-synthetase C-terminal extension Abhydrolase_6 PF12697.7 ORF96573 - 0.025 15.2 0.1 0.066 13.8 0.0 1.8 2 0 0 2 2 2 0 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF96573 - 0.04 13.2 0.1 0.09 12.0 0.1 1.5 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF96573 - 0.083 12.5 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold BLOC1_2 PF10046.9 ORF90780 - 0.00021 21.5 30.1 0.0015 18.8 14.5 3.9 2 1 1 3 3 3 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 HOOK PF05622.12 ORF90780 - 0.0017 16.6 29.9 0.0017 16.6 29.9 2.1 2 0 0 2 2 2 1 HOOK protein DUF4795 PF16043.5 ORF90780 - 0.011 15.4 0.5 0.011 15.4 0.5 3.4 2 1 0 2 2 1 0 Domain of unknown function (DUF4795) Seryl_tRNA_N PF02403.22 ORF90780 - 0.013 15.7 19.8 0.013 15.7 19.8 4.1 3 1 1 4 4 4 0 Seryl-tRNA synthetase N-terminal domain XhlA PF10779.9 ORF90780 - 0.014 15.6 4.7 0.014 15.6 4.7 4.7 2 1 2 4 4 4 0 Haemolysin XhlA DUF4201 PF13870.6 ORF90780 - 0.015 15.1 1.8 0.015 15.1 1.8 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4201) V_ATPase_I PF01496.19 ORF90780 - 0.027 12.4 26.6 0.007 14.3 19.6 2.1 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family Thioredoxin_8 PF13905.6 ORF90780 - 0.043 14.1 0.1 0.043 14.1 0.1 3.8 3 1 0 3 3 3 0 Thioredoxin-like HTH_3 PF01381.22 ORF90780 - 0.044 13.8 1.2 0.11 12.6 1.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_19 PF12844.7 ORF90780 - 0.051 13.6 3.3 0.22 11.5 3.3 2.2 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_GP20 PF06810.11 ORF90780 - 5.8 6.7 33.1 3.5 7.4 10.3 3.5 2 1 1 3 3 3 0 Phage minor structural protein GP20 Uds1 PF15456.6 ORF90780 - 9.7 6.4 29.5 0.096 12.9 17.6 3.0 2 1 1 3 3 3 0 Up-regulated During Septation # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks11.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks11.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks11.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks11.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 17:58:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TIG PF01833.24 ORF14544 - 0.00088 19.3 0.2 0.0014 18.6 0.2 1.3 1 0 0 1 1 1 1 IPT/TIG domain zf-CCCH PF00642.24 ORF141213 - 3.2e-19 68.4 14.6 5.6e-11 42.1 3.2 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF141213 - 2.6e-08 33.7 16.6 6e-07 29.3 3.9 3.0 2 1 0 2 2 2 2 Zinc finger domain zf-CCCH_2 PF14608.6 ORF141213 - 3.9e-06 27.1 12.1 0.0025 18.2 3.9 2.3 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger zf-CCCH_4 PF18044.1 ORF141213 - 7.9e-06 25.5 11.6 2.4e-05 24.0 3.0 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF141213 - 7.8 7.2 13.0 4 8.2 1.1 3.0 2 1 1 3 3 3 0 Torus domain HI0933_like PF03486.14 ORF13944 - 0.13 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein Topo_Zn_Ribbon PF08272.11 ORF13853 - 0.069 12.8 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Topoisomerase I zinc-ribbon-like DnaJ PF00226.31 ORF138264 - 4.9e-20 71.4 2.9 4.9e-20 71.4 2.9 1.8 2 0 0 2 2 2 1 DnaJ domain Myb_DNA-bind_6 PF13921.6 ORF138264 - 0.29 11.4 2.4 7.1 7.0 0.8 2.5 2 0 0 2 2 2 0 Myb-like DNA-binding domain TubC_N PF18563.1 ORF138264 - 0.88 9.6 5.8 5.1 7.2 0.1 3.3 3 0 0 3 3 3 0 TubC N-terminal docking domain AAA_11 PF13086.6 ORF138264 - 1.9 8.2 7.5 2.5 7.8 7.5 1.1 1 0 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 ORF137530 - 1.6e-33 116.0 9.2 1.8e-33 115.8 9.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component RSRP PF17069.5 ORF135973 - 0.031 13.9 11.4 0.066 12.8 11.4 1.5 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 DUF3763 PF12592.8 ORF13424 - 3.9e-23 81.3 2.6 3.9e-23 81.3 2.6 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3763) Perilipin PF03036.16 ORF13424 - 0.031 13.3 0.4 0.037 13.1 0.4 1.3 1 1 0 1 1 1 0 Perilipin family CRAL_TRIO PF00650.20 ORF133759 - 2e-05 24.4 0.0 2.9e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain DUF3823_C PF18003.1 ORF133759 - 0.083 13.6 0.3 0.16 12.7 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3823_C) Pkinase PF00069.25 ORF132478 - 8.3e-48 163.0 0.3 9.4e-48 162.9 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF132478 - 1.6e-29 103.0 0.1 1.8e-29 102.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF132478 - 0.00067 19.3 0.2 0.00095 18.8 0.2 1.2 1 0 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF132478 - 0.0061 15.4 0.0 0.0089 14.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF132478 - 0.021 13.8 0.3 0.036 13.0 0.3 1.4 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF132478 - 0.039 13.3 0.0 0.089 12.1 0.0 1.6 1 1 0 1 1 1 0 Kinase-like APH PF01636.23 ORF132478 - 0.051 13.5 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF132478 - 0.054 13.1 0.6 0.082 12.5 0.3 1.4 2 0 0 2 2 2 0 Choline/ethanolamine kinase COPI_assoc PF08507.10 ORF131661 - 5.7e-09 36.1 6.8 8.4e-09 35.6 6.8 1.3 1 0 0 1 1 1 1 COPI associated protein CTV_P6 PF06706.11 ORF131661 - 0.56 9.9 6.3 1.8 8.3 0.4 3.3 3 0 0 3 3 3 0 Citrus tristeza virus 6-kDa protein DUF4113 PF13438.6 ORF130042 - 0.26 11.4 6.1 1.1 9.4 0.3 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4113) Homeobox_KN PF05920.11 ORF128442 - 1.1e-14 54.0 1.2 2.1e-14 53.1 0.1 1.9 2 0 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF128442 - 0.00015 21.6 0.0 0.00032 20.5 0.0 1.5 1 0 0 1 1 1 1 Homeodomain Phage_HK97_TLTM PF06120.11 ORF128442 - 0.0062 15.8 0.7 0.0077 15.5 0.7 1.1 1 0 0 1 1 1 1 Tail length tape measure protein IstB_IS21 PF01695.17 ORF127114 - 0.049 13.4 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein SURF4 PF02077.15 ORF127114 - 0.56 9.8 7.1 2.3 7.7 3.3 2.2 2 0 0 2 2 2 0 SURF4 family Virul_Fac PF10139.9 ORF12695 - 0.0091 14.3 4.7 0.011 13.9 4.7 1.0 1 0 0 1 1 1 1 Putative bacterial virulence factor CSG2 PF16965.5 ORF12695 - 1.6 7.6 5.4 4.2 6.2 0.8 2.1 1 1 1 2 2 2 0 Ceramide synthase regulator Presenilin PF01080.17 ORF12695 - 2.2 7.0 8.9 2.4 6.8 8.9 1.3 1 0 0 1 1 1 0 Presenilin Band_3_cyto PF07565.13 ORF12695 - 3 7.6 7.7 3.4 7.4 7.7 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain PIP49_N PF14875.6 ORF126617 - 0.022 14.7 3.6 0.12 12.3 0.2 2.1 1 1 1 2 2 2 0 N-term cysteine-rich ER, FAM69 Peptidase_S76 PF13611.6 ORF125041 - 0.088 13.1 0.0 0.2 12.0 0.0 1.5 1 1 0 1 1 1 0 Serine peptidase of plant viral polyprotein, P1 BPD_transp_1 PF00528.22 ORF12267 - 1.2e-21 77.2 13.0 1.5e-21 77.0 13.0 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component HEAT_PBS PF03130.16 ORF12267 - 0.78 10.6 4.1 4.9 8.1 0.3 3.1 3 1 0 3 3 3 0 PBS lyase HEAT-like repeat FtsX PF02687.21 ORF12267 - 2.9 8.4 13.9 0.2 12.2 7.6 2.0 1 1 1 2 2 2 0 FtsX-like permease family Cons_hypoth698 PF03601.14 ORF121664 - 7.1e-40 136.8 5.8 8.1e-40 136.6 5.8 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 698 DUF2818 PF10993.8 ORF121664 - 0.017 15.7 0.3 0.044 14.3 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2818) ADP_ribosyl_GH PF03747.14 ORF12057 - 1.4e-27 97.2 0.0 1.8e-27 96.9 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase THF_DHG_CYH PF00763.23 ORF12057 - 0.095 13.0 0.0 2.5 8.4 0.0 2.3 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HI0933_like PF03486.14 ORF119431 - 0.13 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein zf-C2H2_aberr PF17017.5 ORF118430 - 0.0013 18.9 0.4 0.0029 17.8 0.3 1.6 2 0 0 2 2 2 1 Aberrant zinc-finger GldM_N PF12081.8 ORF118430 - 0.0073 16.4 2.7 0.011 15.9 2.7 1.3 1 0 0 1 1 1 1 GldM N-terminal domain MIF4G_like_2 PF09090.11 ORF118430 - 0.044 13.3 0.2 0.068 12.6 0.2 1.3 1 0 0 1 1 1 0 MIF4G like bZIP_1 PF00170.21 ORF118430 - 0.074 13.2 1.0 0.16 12.1 1.0 1.6 1 0 0 1 1 1 0 bZIP transcription factor V-set_CD47 PF08204.11 ORF117976 - 0.004 17.1 0.5 0.0087 16.0 0.5 1.5 1 0 0 1 1 1 1 CD47 immunoglobulin-like domain EF-hand_7 PF13499.6 ORF117209 - 3.3e-12 46.7 5.4 9.1e-09 35.6 1.3 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF117209 - 7e-11 40.9 0.3 8.2e-06 25.0 0.0 2.6 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF117209 - 4.5e-08 32.4 0.4 0.00033 20.3 0.1 2.8 1 1 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF117209 - 1e-06 28.5 1.0 0.041 13.7 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF117209 - 3.1e-06 26.4 0.8 0.0061 16.0 0.1 2.5 2 0 0 2 2 2 2 EF hand EF-hand_9 PF14658.6 ORF117209 - 0.079 13.3 0.0 0.17 12.2 0.0 1.7 1 0 0 1 1 1 0 EF-hand domain EF-hand_4 PF12763.7 ORF117209 - 0.19 11.7 1.8 3.1 7.8 0.1 2.2 1 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand DER1 PF04511.15 ORF116382 - 7.9e-23 81.4 4.9 9.3e-23 81.2 4.9 1.0 1 0 0 1 1 1 1 Der1-like family zf-A20 PF01754.16 ORF114932 - 0.011 15.6 1.8 0.038 13.9 1.8 2.0 1 0 0 1 1 1 0 A20-like zinc finger Phe_ZIP PF08916.11 ORF114932 - 0.037 14.7 1.5 3 8.6 0.2 2.5 2 0 0 2 2 2 0 Phenylalanine zipper DHFR_2 PF06442.11 ORF114932 - 0.14 12.0 0.2 4.9 7.1 0.0 2.3 2 0 0 2 2 2 0 R67 dihydrofolate reductase SpoIIIAC PF06686.11 ORF114929 - 0.22 11.8 3.5 0.37 11.0 0.1 2.6 3 0 0 3 3 3 0 Stage III sporulation protein AC/AD protein family TetR_C_36 PF18598.1 ORF114037 - 0.12 12.3 0.0 0.69 9.9 0.0 2.0 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain WES_acyltransf PF03007.16 ORF110785 - 6.8e-05 22.8 0.0 9.6e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF110785 - 0.0041 15.7 0.1 0.0055 15.3 0.1 1.1 1 0 0 1 1 1 1 Alcohol acetyltransferase DUF2451 PF10474.9 ORF109446 - 0.00061 19.6 0.3 0.00093 19.0 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function C-terminus (DUF2451) TSNAXIP1_N PF15739.5 ORF109446 - 0.027 14.9 1.0 0.027 14.9 1.0 2.9 1 1 1 3 3 3 0 Translin-associated factor X-interacting N-terminus KxDL PF10241.9 ORF109446 - 0.032 14.5 1.9 12 6.2 0.2 3.1 2 1 1 3 3 3 0 Uncharacterized conserved protein HycH PF07450.11 ORF109446 - 0.061 13.7 0.2 0.14 12.5 0.1 1.7 1 1 1 2 2 2 0 Formate hydrogenlyase maturation protein HycH Wtap PF17098.5 ORF109446 - 0.086 12.8 3.0 0.091 12.7 0.6 2.1 2 1 0 2 2 2 0 WTAP/Mum2p family Retrotrans_gag PF03732.17 ORF109446 - 0.92 9.8 3.9 21 5.4 0.0 3.0 2 1 1 3 3 3 0 Retrotransposon gag protein AMPK1_CBM PF16561.5 ORF108203 - 2.4e-18 66.1 0.0 3.9e-18 65.4 0.0 1.4 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase AMPKBI PF04739.15 ORF108203 - 1.8e-07 31.3 0.3 4.6e-07 30.0 0.2 1.7 1 1 0 1 1 1 1 5'-AMP-activated protein kinase beta subunit, interaction domain SURF2 PF05477.11 ORF107695 - 0.14 11.8 7.5 0.17 11.5 7.5 1.2 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) Ank_2 PF12796.7 ORF105750 - 2.1e-12 47.4 0.0 9.1e-08 32.6 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF105750 - 2.6e-09 37.1 0.2 0.00043 20.6 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF105750 - 2e-06 27.6 0.3 0.089 13.4 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF105750 - 2.1e-06 28.2 0.2 0.028 15.0 0.0 2.6 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF105750 - 0.0011 19.3 0.3 0.051 13.9 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) FAM70 PF14967.6 ORF105478 - 2.7 7.4 5.9 3.5 7.0 5.9 1.1 1 0 0 1 1 1 0 FAM70 protein MORN PF02493.20 ORF104387 - 1.1e-27 94.2 39.8 2.4e-08 33.4 0.8 8.3 7 1 2 9 9 9 7 MORN repeat CAF-1_p60_C PF15512.6 ORF100265 - 0.017 15.7 9.1 0.12 12.8 5.2 2.2 2 0 0 2 2 2 0 Chromatin assembly factor complex 1 subunit p60, C-terminal Hid1 PF12722.7 ORF100265 - 3 5.9 4.6 3.1 5.8 4.6 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF3251 PF11622.8 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 1.4e-52 177.7 0.7 1.8e-52 177.3 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3251) TMF_TATA_bd PF12325.8 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 0.013 15.8 0.3 0.034 14.4 0.5 1.5 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding DASH_Dad4 PF08650.10 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 0.078 13.0 1.1 0.33 11.0 1.5 1.7 2 0 0 2 2 2 0 DASH complex subunit Dad4 Comm PF15957.5 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 0.08 13.3 0.0 0.17 12.3 0.1 1.5 2 0 0 2 2 2 0 Commissureless LURAP PF14854.6 NODE_36578_length_586_cov_4.372051_g29422_i0reverse_frame_1 - 0.16 12.0 0.7 0.51 10.3 0.7 1.8 1 1 0 1 1 1 0 Leucine rich adaptor protein Crystall PF00030.19 NODE_36576_length_586_cov_40.121597_g29420_i0forward_frame_1 - 0.056 13.7 0.2 0.17 12.1 0.2 1.8 1 0 0 1 1 1 0 Beta/Gamma crystallin Defensin_big PF14862.6 NODE_36566_length_586_cov_87.687840_g29410_i0forward_frame_1 - 0.12 12.7 0.3 16 5.9 0.1 2.4 2 0 0 2 2 2 0 Big defensin CENP-H PF05837.12 NODE_36566_length_586_cov_87.687840_g29410_i0forward_frame_1 - 0.93 9.9 9.1 0.46 10.9 6.8 1.7 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Msg2_C PF12373.8 NODE_36566_length_586_cov_87.687840_g29410_i0forward_frame_1 - 3 7.4 7.1 34 4.0 0.2 3.4 3 0 0 3 3 3 0 Major surface glycoprotein 2 C terminal CTP_transf_1 PF01148.20 NODE_36548_length_586_cov_242.947368_g29394_i0forward_frame_1 - 3.2 7.4 14.8 2.1 8.1 13.1 1.4 1 1 0 1 1 1 0 Cytidylyltransferase family GBP_repeat PF02526.14 NODE_36543_length_586_cov_472.067151_g29389_i0forward_frame_1 - 0.21 11.3 1.7 0.22 11.2 0.3 1.7 2 0 0 2 2 2 0 Glycophorin-binding protein TOM13 PF08219.11 NODE_36540_length_586_cov_991.575318_g29387_i0reverse_frame_1 - 0.035 14.1 0.1 0.064 13.2 0.1 1.4 1 0 0 1 1 1 0 Outer membrane protein TOM13 YajC PF02699.15 NODE_36540_length_586_cov_991.575318_g29387_i0forward_frame_1 - 2.2 8.2 8.4 16 5.4 3.2 2.4 2 0 0 2 2 2 0 Preprotein translocase subunit Radical_SAM PF04055.21 NODE_36500_length_587_cov_130.581522_g29354_i0reverse_frame_1 - 3.1e-08 34.2 0.0 4.6e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily TRAM PF01938.20 NODE_36500_length_587_cov_130.581522_g29354_i0reverse_frame_1 - 0.036 14.0 0.0 0.069 13.2 0.0 1.5 1 0 0 1 1 1 0 TRAM domain PPR PF01535.20 NODE_36495_length_587_cov_150.184783_g29349_i0forward_frame_1 - 0.00015 21.8 0.0 0.17 12.2 0.0 2.6 2 0 0 2 2 2 2 PPR repeat DUF3701 PF12482.8 NODE_36486_length_587_cov_281.751812_g29341_i0forward_frame_1 - 0.11 12.6 0.0 0.2 11.8 0.0 1.5 1 1 0 1 1 1 0 Phage integrase protein LRR_8 PF13855.6 NODE_36469_length_588_cov_2.506329_g29327_i0reverse_frame_1 - 1.3e-12 47.3 16.0 0.00036 20.2 8.5 5.1 2 1 3 5 5 5 4 Leucine rich repeat LRR_4 PF12799.7 NODE_36469_length_588_cov_2.506329_g29327_i0reverse_frame_1 - 6.5e-12 45.5 19.9 9.4e-05 22.7 3.3 5.1 1 1 6 7 7 7 6 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 NODE_36469_length_588_cov_2.506329_g29327_i0reverse_frame_1 - 2.1e-07 30.6 8.0 0.0016 18.0 2.3 2.7 1 1 2 3 3 3 3 Leucine-rich repeat LRR_6 PF13516.6 NODE_36469_length_588_cov_2.506329_g29327_i0reverse_frame_1 - 1.5 9.1 0.1 1.5 9.1 0.1 5.0 7 0 0 7 7 7 0 Leucine Rich repeat HTH_36 PF13730.6 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 6.5e-08 32.4 0.0 1e-07 31.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.00018 21.4 0.1 0.00041 20.2 0.1 1.6 1 1 0 1 1 1 1 HTH domain DUF3782 PF12644.7 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.021 15.0 0.0 0.048 13.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3782) LexA_DNA_bind PF01726.16 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.063 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain Matrix PF00661.21 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.092 11.4 0.0 0.13 10.9 0.0 1.2 1 0 0 1 1 1 0 Viral matrix protein HTH_20 PF12840.7 NODE_36462_length_588_cov_3.446655_g29320_i0reverse_frame_1 - 0.15 12.2 0.0 0.33 11.0 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain Mgr1 PF08602.10 NODE_36458_length_588_cov_4.759494_g29316_i0forward_frame_1 - 0.22 10.3 0.0 0.22 10.3 0.0 1.1 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit PPR_2 PF13041.6 NODE_36437_length_588_cov_110.491863_g29295_i0reverse_frame_1 - 4e-07 30.1 0.0 1.6e-05 25.0 0.0 2.8 3 0 0 3 3 3 1 PPR repeat family PPR_3 PF13812.6 NODE_36437_length_588_cov_110.491863_g29295_i0reverse_frame_1 - 7.7e-05 22.7 0.1 0.47 10.6 0.0 3.3 2 1 0 3 3 3 2 Pentatricopeptide repeat domain PPR PF01535.20 NODE_36437_length_588_cov_110.491863_g29295_i0reverse_frame_1 - 0.00013 22.0 0.0 0.23 11.8 0.0 3.1 3 0 0 3 3 3 2 PPR repeat PPR_1 PF12854.7 NODE_36437_length_588_cov_110.491863_g29295_i0reverse_frame_1 - 0.0013 18.4 0.0 0.21 11.3 0.0 3.1 3 0 0 3 3 3 1 PPR repeat Glu_dehyd_C PF16912.5 NODE_36437_length_588_cov_110.491863_g29295_i0reverse_frame_1 - 0.0059 16.1 0.1 0.67 9.4 0.0 2.1 1 1 0 2 2 2 2 Glucose dehydrogenase C-terminus PPR_long PF17177.4 NODE_36437_length_588_cov_110.491863_g29295_i0reverse_frame_1 - 0.0069 15.8 0.0 0.009 15.4 0.0 1.3 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP DprA_WH PF17782.1 NODE_36437_length_588_cov_110.491863_g29295_i0reverse_frame_1 - 0.1 12.7 0.6 0.5 10.5 0.0 2.3 2 1 0 2 2 2 0 DprA winged helix domain DUF983 PF06170.12 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_1 - 0.0021 18.4 11.0 2.7 8.5 0.1 4.9 1 1 4 5 5 5 2 Protein of unknown function (DUF983) DHODB_Fe-S_bind PF10418.9 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_1 - 3.8 7.4 13.2 22 5.0 1.2 4.7 4 1 1 5 5 5 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B zf-RING_7 PF02591.15 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_1 - 5 7.4 18.0 28 5.0 0.2 5.3 6 0 0 6 6 6 0 C4-type zinc ribbon domain GSu_C4xC__C2xCH PF09698.10 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_1 - 5.5 7.9 25.4 11 6.9 0.2 6.8 7 0 0 7 7 7 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) C1_1 PF00130.22 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_1 - 7.7 6.5 10.9 51 3.9 4.7 3.8 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) SprT-like PF10263.9 NODE_36407_length_589_cov_1.983755_g29266_i0forward_frame_2 - 0.099 12.5 0.2 0.11 12.4 0.2 1.2 1 0 0 1 1 1 0 SprT-like family Mito_fiss_reg PF05308.11 NODE_36383_length_589_cov_184.070397_g25310_i1forward_frame_3 - 0.81 9.7 8.6 0.37 10.8 6.5 1.4 1 1 0 1 1 1 0 Mitochondrial fission regulator tRNA_bind PF01588.20 NODE_36377_length_589_cov_232.947653_g29239_i0forward_frame_3 - 0.04 14.0 0.0 0.15 12.2 0.0 1.8 1 1 1 2 2 2 0 Putative tRNA binding domain Peptidase_C1 PF00112.23 NODE_36362_length_589_cov_1809.092058_g29226_i0forward_frame_3 - 6.4e-14 52.6 0.1 7.8e-14 52.3 0.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_36362_length_589_cov_1809.092058_g29226_i0forward_frame_3 - 0.00045 19.1 0.1 0.0011 17.8 0.0 1.5 2 0 0 2 2 2 1 Peptidase C1-like family Peptidase_C39_2 PF13529.6 NODE_36362_length_589_cov_1809.092058_g29226_i0forward_frame_3 - 0.0011 19.5 0.0 0.0018 18.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase_C39 like family Gram_pos_anchor PF00746.21 NODE_36335_length_590_cov_267.009009_g29202_i0reverse_frame_3 - 0.085 12.8 0.4 0.085 12.8 0.4 2.9 3 0 0 3 3 3 0 LPXTG cell wall anchor motif Pacifastin_I PF05375.13 NODE_36334_length_590_cov_274.929730_g29201_i0reverse_frame_2 - 4.5 7.1 10.8 4.1 7.2 4.5 2.4 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) Aldo_ket_red PF00248.21 NODE_36318_length_591_cov_3.079137_g29185_i0reverse_frame_2 - 1.8e-26 93.1 0.0 3e-26 92.3 0.0 1.4 1 1 0 1 1 1 1 Aldo/keto reductase family Invasin_D3 PF09134.10 NODE_36316_length_591_cov_3.478417_g29183_i0reverse_frame_3 - 5.3e-13 49.1 13.8 5.3e-10 39.5 0.4 2.2 2 0 0 2 2 2 2 Invasin, domain 3 Big_1 PF02369.16 NODE_36316_length_591_cov_3.478417_g29183_i0reverse_frame_3 - 0.0001 22.2 6.3 0.0001 22.2 6.3 4.0 3 2 1 4 4 4 2 Bacterial Ig-like domain (group 1) DUF2799 PF10973.8 NODE_36312_length_591_cov_4.658273_g29179_i0reverse_frame_2 - 0.0078 16.6 0.2 0.014 15.8 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2799) MEDS PF14417.6 NODE_36305_length_591_cov_60.233813_g29172_i0forward_frame_2 - 0.49 10.2 4.2 0.75 9.6 0.2 2.2 2 0 0 2 2 2 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain FAM76 PF16046.5 NODE_36305_length_591_cov_60.233813_g29172_i0forward_frame_2 - 2.2 7.5 16.5 2.9 7.2 16.5 1.0 1 0 0 1 1 1 0 FAM76 protein DIT1_PvcA PF05141.12 NODE_36305_length_591_cov_60.233813_g29172_i0forward_frame_2 - 4.6 6.6 10.5 2.7 7.4 8.4 1.5 1 1 1 2 2 2 0 Pyoverdine/dityrosine biosynthesis protein CYSTM PF12734.7 NODE_36302_length_591_cov_74.841727_g29169_i0reverse_frame_3 - 1.3 9.4 5.7 2.5 8.5 5.7 1.4 1 0 0 1 1 1 0 Cysteine-rich TM module stress tolerance DUF3397 PF11877.8 NODE_36301_length_591_cov_80.456835_g29168_i0reverse_frame_3 - 0.022 15.0 5.1 0.044 14.0 4.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3397) RE_XcyI PF09571.10 NODE_36301_length_591_cov_80.456835_g29168_i0reverse_frame_3 - 0.028 13.7 0.0 5.9 6.1 0.0 2.1 2 0 0 2 2 2 0 XcyI restriction endonuclease TRP PF06011.12 NODE_36301_length_591_cov_80.456835_g29168_i0reverse_frame_3 - 0.13 10.9 3.2 0.18 10.5 3.2 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel CoA_binding_3 PF13727.6 NODE_36301_length_591_cov_80.456835_g29168_i0reverse_frame_3 - 0.19 11.7 0.7 0.66 10.0 0.0 1.9 1 1 1 2 2 2 0 CoA-binding domain PPI_Ypi1 PF07491.11 NODE_36282_length_591_cov_189.208633_g29151_i0reverse_frame_2 - 0.048 13.5 4.1 0.078 12.8 4.1 1.3 1 0 0 1 1 1 0 Protein phosphatase inhibitor CHORD PF04968.12 NODE_36280_length_591_cov_210.915468_g29149_i0reverse_frame_3 - 0.0047 17.6 1.6 0.011 16.4 0.1 2.1 2 0 0 2 2 2 1 CHORD CEBP_ZZ PF16366.5 ORF95399 - 1.5 9.1 8.1 0.18 12.1 1.3 2.3 2 0 0 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-C3HC4_2 PF13923.6 ORF94661 - 1.6e-10 40.7 8.9 2.8e-10 39.9 8.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF94661 - 7.3e-10 38.6 9.0 1.4e-09 37.7 9.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF94661 - 9.5e-09 35.5 8.3 1.7e-08 34.7 8.3 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF94661 - 5.9e-08 32.5 8.5 9.3e-08 31.8 8.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF94661 - 1.3e-07 31.5 4.4 3.4e-07 30.2 4.5 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF94661 - 4.2e-06 26.6 6.6 8.7e-06 25.6 6.6 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF94661 - 2.6e-05 24.0 7.3 5.9e-05 22.8 7.3 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_6 PF14835.6 ORF94661 - 4.8e-05 23.1 2.8 8.6e-05 22.3 2.8 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-C3HC4_4 PF15227.6 ORF94661 - 0.00011 22.3 10.8 0.00025 21.1 10.8 1.7 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_10 PF16685.5 ORF94661 - 0.002 18.2 6.6 0.0034 17.5 6.6 1.3 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-rbx1 PF12678.7 ORF94661 - 0.0022 18.2 7.7 0.0072 16.6 7.7 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_4 PF14570.6 ORF94661 - 0.0053 16.5 7.2 0.014 15.1 7.2 1.8 1 1 0 1 1 1 1 RING/Ubox like zinc-binding domain Coq4 PF05019.13 ORF94661 - 0.0062 15.9 0.0 0.0095 15.3 0.0 1.3 1 0 0 1 1 1 1 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 zf-RING_11 PF17123.5 ORF94661 - 0.12 12.1 5.3 0.57 10.0 5.4 2.1 2 0 0 2 2 2 0 RING-like zinc finger zinc-ribbons_6 PF07191.12 ORF94661 - 0.33 10.9 5.3 0.88 9.6 5.3 1.8 1 1 0 1 1 1 0 zinc-ribbons SAGA-Tad1 PF12767.7 ORF93885 - 0.47 10.1 5.6 0.64 9.7 5.6 1.2 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit MscS_porin PF12795.7 ORF9366 - 0.002 17.8 1.4 0.002 17.8 1.4 2.2 1 1 1 2 2 2 1 Mechanosensitive ion channel porin domain COG5 PF10392.9 ORF9366 - 0.01 16.0 5.2 0.12 12.5 1.1 2.5 2 1 0 2 2 2 0 Golgi transport complex subunit 5 Dynamin_M PF01031.20 ORF9366 - 0.018 14.3 4.9 0.21 10.7 0.3 2.1 1 1 1 2 2 2 0 Dynamin central region Laminin_II PF06009.12 ORF9366 - 0.023 14.7 9.9 0.072 13.1 1.8 2.3 1 1 1 2 2 2 0 Laminin Domain II HalX PF08663.10 ORF9366 - 0.043 14.1 1.9 0.043 14.1 1.9 3.0 3 1 0 3 3 2 0 HalX domain Lipoprotein_7 PF01540.16 ORF9366 - 0.046 13.0 1.7 0.1 11.8 1.7 1.4 1 1 0 1 1 1 0 Adhesin lipoprotein DUF3510 PF12022.8 ORF9366 - 0.05 14.0 0.8 0.11 12.9 0.2 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3510) CENP-O PF09496.10 ORF9366 - 0.054 13.5 1.6 0.074 13.0 1.6 1.2 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component DUF4407 PF14362.6 ORF9366 - 0.054 12.8 7.5 0.071 12.5 7.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Pilus_CpaD PF09476.10 ORF9366 - 0.058 13.1 1.0 0.072 12.8 1.0 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) Dehydratase_hem PF13816.6 ORF9366 - 0.073 12.5 0.1 0.09 12.2 0.1 1.2 1 0 0 1 1 1 0 Haem-containing dehydratase FapA PF03961.13 ORF9366 - 0.15 10.6 4.8 0.19 10.3 4.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Fib_alpha PF08702.10 ORF9366 - 0.19 11.9 5.9 0.38 10.9 5.6 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF848 PF05852.11 ORF9366 - 0.19 11.8 8.9 2.4 8.3 0.5 2.2 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) FUSC PF04632.12 ORF9366 - 0.21 10.1 2.0 0.27 9.7 2.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family MutL_C PF08676.11 ORF9366 - 0.29 10.9 8.1 0.45 10.3 8.1 1.3 1 0 0 1 1 1 0 MutL C terminal dimerisation domain Retrotran_gag_2 PF14223.6 ORF9366 - 0.29 10.8 2.2 0.48 10.1 1.9 1.5 1 1 0 1 1 1 0 gag-polypeptide of LTR copia-type OmpH PF03938.14 ORF9366 - 0.31 11.4 14.7 0.93 9.8 14.7 1.7 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF1993 PF09351.10 ORF9366 - 0.34 11.0 3.3 0.95 9.6 0.4 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF1993) U3_snoRNA_assoc PF08297.11 ORF9366 - 0.4 11.4 4.5 0.31 11.8 2.1 2.1 1 1 1 2 2 2 0 U3 snoRNA associated Spc7 PF08317.11 ORF9366 - 0.45 9.4 14.0 0.76 8.6 14.0 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein ATG16 PF08614.11 ORF9366 - 0.54 10.4 15.4 2 8.6 12.7 2.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF5082 PF16888.5 ORF9366 - 0.56 10.5 5.9 4.1 7.7 0.3 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) HrpB7 PF09486.10 ORF9366 - 0.77 10.1 9.5 7.4 6.9 2.7 2.3 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) YscO PF07321.12 ORF9366 - 1.5 8.7 16.1 2.5 8.1 3.0 2.5 2 1 0 2 2 2 0 Type III secretion protein YscO TMF_TATA_bd PF12325.8 ORF9366 - 1.9 8.8 13.8 0.57 10.4 9.4 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Noelin-1 PF12308.8 ORF9366 - 2 8.4 5.0 5.6 7.0 0.7 2.4 1 1 1 2 2 2 0 Neurogenesis glycoprotein Fez1 PF06818.15 ORF9366 - 3.6 8.0 13.6 4.3 7.7 6.1 2.1 1 1 1 2 2 2 0 Fez1 Syntaxin_2 PF14523.6 ORF9366 - 4.2 7.8 6.6 12 6.4 2.3 2.6 1 1 1 2 2 2 0 Syntaxin-like protein BLOC1_2 PF10046.9 ORF9366 - 5.6 7.3 9.2 9.1 6.7 1.3 2.5 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cauli_AT PF03233.13 ORF9366 - 5.9 6.8 5.3 13 5.6 0.3 2.2 2 0 0 2 2 2 0 Aphid transmission protein TMPIT PF07851.13 ORF9366 - 6.5 5.9 7.6 5.3 6.2 4.8 1.8 1 1 1 2 2 2 0 TMPIT-like protein FlaC_arch PF05377.11 ORF9366 - 8.9 6.8 7.9 28 5.2 1.2 3.2 2 2 1 3 3 3 0 Flagella accessory protein C (FlaC) RAMP4 PF06624.12 ORF92880 - 0.27 11.3 1.7 0.5 10.5 1.7 1.4 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Bact_lectin PF18483.1 ORF92550 - 0.00044 20.3 1.1 0.0006 19.9 1.1 1.2 1 0 0 1 1 1 1 Bacterial lectin DNA_pol_delta_4 PF04081.13 ORF92550 - 3.3 8.1 10.9 1 9.7 7.4 1.9 2 1 0 2 2 2 0 DNA polymerase delta, subunit 4 Sel1 PF08238.12 ORF90308 - 4.7e-13 49.3 4.1 4.1e-05 24.1 0.0 4.5 4 1 0 4 4 4 3 Sel1 repeat TPR_2 PF07719.17 ORF90308 - 0.0064 16.5 0.5 1.2 9.4 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF90308 - 0.089 13.0 0.0 0.25 11.6 0.0 1.8 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 Mrpl_C PF18502.1 ORF89568 - 0.023 15.0 0.0 0.039 14.2 0.0 1.4 1 0 0 1 1 1 0 54S ribosomal protein L8 C-terminal domain Pkinase PF00069.25 ORF86215 - 2.6e-13 49.9 0.0 3.4e-13 49.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86215 - 0.00041 19.7 0.0 0.00056 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Fer4_23 PF18009.1 ORF86045 - 0.057 13.8 7.6 0.13 12.7 1.4 2.4 2 0 0 2 2 2 0 4Fe-4S iron-sulfur cluster binding domain Aldedh PF00171.22 ORF82598 - 3.4e-06 25.8 0.0 5.8e-06 25.1 0.0 1.4 1 1 0 1 1 1 1 Aldehyde dehydrogenase family CLAMP PF14769.6 ORF82327 - 1.5e-10 41.4 1.0 2.5e-10 40.7 1.0 1.4 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 BT1 PF03092.16 ORF81760 - 1.8e-07 29.8 1.6 2e-07 29.6 1.6 1.1 1 0 0 1 1 1 1 BT1 family Tyr-DNA_phospho PF06087.12 ORF813 - 0.01 14.8 0.2 0.012 14.5 0.2 1.1 1 0 0 1 1 1 0 Tyrosyl-DNA phosphodiesterase TPR_10 PF13374.6 ORF80254 - 7.4e-33 111.5 9.8 3.2e-13 49.1 0.4 5.0 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.6 ORF80254 - 6.1e-27 93.7 7.8 6.9e-13 48.7 0.5 3.2 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF80254 - 1e-07 31.4 5.6 0.022 14.8 0.3 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF80254 - 1.5e-06 27.8 1.8 0.0052 16.5 0.2 3.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF80254 - 3.3e-06 26.7 2.3 1.2e-05 24.8 0.9 1.9 1 1 1 2 2 2 1 MalT-like TPR region TPR_14 PF13428.6 ORF80254 - 7.5e-06 26.3 14.0 0.052 14.4 0.4 4.5 4 1 1 5 5 4 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF80254 - 8.5e-06 25.9 14.4 0.016 15.8 0.7 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_5 PF12688.7 ORF80254 - 3e-05 24.3 2.8 0.00033 20.9 1.3 2.6 2 1 1 3 3 3 1 Tetratrico peptide repeat TPR_2 PF07719.17 ORF80254 - 0.0001 22.1 9.5 0.018 15.2 0.5 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF80254 - 0.00068 19.6 2.0 0.46 10.8 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF80254 - 0.00094 19.8 10.4 0.11 13.1 0.4 4.1 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF80254 - 0.0023 18.2 0.4 34 5.1 0.0 3.9 3 1 0 3 3 3 0 Tetratricopeptide repeat EF-hand_9 PF14658.6 ORF80254 - 0.0033 17.7 0.0 0.0061 16.9 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain DUF4404 PF14357.6 ORF80254 - 0.0053 17.4 1.8 2.3 8.9 0.9 2.7 1 1 0 2 2 2 1 Domain of unknown function (DUF4404) TPR_3 PF07720.12 ORF80254 - 0.016 15.2 0.3 2.5 8.2 0.0 2.6 3 0 0 3 3 2 0 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF80254 - 0.037 13.4 1.8 7.5 5.9 0.4 2.8 1 1 0 2 2 2 0 Coatomer epsilon subunit DUF3632 PF12311.8 ORF80254 - 0.045 14.2 0.2 0.086 13.3 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3632) Phostensin_N PF13916.6 ORF80254 - 0.054 13.8 0.0 3.6 8.0 0.0 2.8 3 0 0 3 3 3 0 PP1-regulatory protein, Phostensin N-terminal TPR_19 PF14559.6 ORF80254 - 0.061 13.8 8.4 0.74 10.4 1.2 3.2 2 1 2 4 4 4 0 Tetratricopeptide repeat PrmC_N PF17827.1 ORF80254 - 0.062 13.9 2.5 4.6 7.9 0.4 2.7 1 1 0 2 2 2 0 PrmC N-terminal domain Mating_N PF12731.7 ORF80254 - 0.091 12.9 0.2 14 5.9 0.0 3.3 3 1 0 3 3 3 0 Mating-type protein beta 1 zf-C2H2_assoc PF16606.5 ORF80188 - 0.15 12.3 1.3 0.22 11.7 0.5 1.7 1 1 0 1 1 1 0 Unstructured conserved, between two C2H2-type zinc-fingers SPATA6 PF14909.6 ORF78429 - 8.7 6.5 9.9 19 5.4 0.4 3.1 2 1 1 3 3 3 0 Spermatogenesis-assoc protein 6 DUF1684 PF07920.11 ORF77803 - 0.16 12.3 0.5 1.7 8.9 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1684) Tyr-DNA_phospho PF06087.12 ORF75598 - 0.01 14.8 0.2 0.012 14.5 0.2 1.1 1 0 0 1 1 1 0 Tyrosyl-DNA phosphodiesterase TPR_1 PF00515.28 ORF71387 - 7.5e-06 25.5 5.5 0.016 15.0 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF71387 - 0.00038 20.4 5.9 0.015 15.4 0.1 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF71387 - 0.0039 17.5 4.9 3.2 8.1 0.0 3.4 3 1 0 3 3 3 2 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF71387 - 0.028 14.5 0.8 0.59 10.2 0.2 2.4 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 5 ANAPC3 PF12895.7 ORF71387 - 0.035 14.3 0.9 1.6 9.0 0.0 2.6 2 1 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF71387 - 0.035 14.8 0.3 4 8.2 0.1 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF71387 - 0.046 13.4 0.0 0.42 10.3 0.0 2.4 2 0 0 2 2 2 0 TPR repeat AcetylCoA_hydro PF02550.15 ORF71359 - 0.015 15.3 0.1 0.023 14.7 0.1 1.3 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase N-terminal domain DUF3486 PF11985.8 ORF71359 - 0.039 14.4 0.5 0.056 13.9 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) HWE_HK PF07536.14 ORF71359 - 0.053 14.2 0.0 0.087 13.5 0.0 1.3 1 0 0 1 1 1 0 HWE histidine kinase Cor1 PF04803.12 ORF71359 - 0.3 11.3 5.1 0.27 11.5 1.4 2.1 2 0 0 2 2 2 0 Cor1/Xlr/Xmr conserved region Exo70 PF03081.15 ORF70565 - 0.23 10.5 0.0 0.3 10.1 0.0 1.1 1 0 0 1 1 1 0 Exo70 exocyst complex subunit HIGH_NTase1 PF05636.11 ORF70351 - 0.0074 15.5 2.3 0.0092 15.2 2.3 1.1 1 0 0 1 1 1 1 HIGH Nucleotidyl Transferase ABC2_membrane_3 PF12698.7 ORF70351 - 0.2 10.7 0.3 0.24 10.4 0.3 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein EOS1 PF12326.8 ORF70351 - 0.42 10.5 1.0 0.81 9.6 1.0 1.7 1 1 0 1 1 1 0 N-glycosylation protein CX9C PF16860.5 ORF70351 - 1.2 9.2 8.7 7.2 6.7 0.2 3.0 3 0 0 3 3 3 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, DUF4047 PF13256.6 ORF6998 - 0.52 10.5 13.5 0.73 10.0 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) Glyco_transf_90 PF05686.12 ORF69496 - 5.3e-16 58.5 0.0 6.3e-16 58.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 90 DTW PF03942.15 ORF69496 - 0.03 14.0 0.0 0.038 13.7 0.0 1.2 1 0 0 1 1 1 0 DTW domain Sulfotransfer_4 PF17784.1 ORF68896 - 4.8e-33 114.8 0.4 6e-33 114.5 0.4 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Folate_rec PF03024.14 ORF65720 - 0.03 14.2 6.1 0.044 13.6 6.1 1.2 1 0 0 1 1 1 0 Folate receptor family FG-GAP PF01839.23 ORF63802 - 3.3e-08 33.5 1.2 0.0018 18.3 0.1 2.4 2 0 0 2 2 2 2 FG-GAP repeat VCBS PF13517.6 ORF63802 - 9e-08 32.6 3.2 0.0027 18.3 1.1 2.4 2 0 0 2 2 2 2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella HEAT PF02985.22 ORF62683 - 0.00041 20.4 0.0 0.0014 18.7 0.0 1.8 1 0 0 1 1 1 1 HEAT repeat HEAT_2 PF13646.6 ORF62683 - 0.00043 20.6 0.3 0.00066 20.0 0.3 1.3 1 0 0 1 1 1 1 HEAT repeats Arm PF00514.23 ORF62683 - 0.01 15.9 0.0 0.021 14.9 0.0 1.5 1 0 0 1 1 1 0 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF62683 - 0.028 14.9 0.3 0.054 14.0 0.0 1.6 2 0 0 2 2 2 0 HEAT-like repeat Adaptin_N PF01602.20 ORF62683 - 0.21 10.1 0.2 0.28 9.7 0.2 1.0 1 0 0 1 1 1 0 Adaptin N terminal region Myb_DNA-bind_6 PF13921.6 ORF62679 - 7.9e-05 22.8 0.1 0.00046 20.4 0.0 2.4 2 2 1 3 3 3 1 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 ORF62679 - 0.048 13.9 0.0 0.1 12.8 0.0 1.7 1 0 0 1 1 1 0 Myb-like DNA-binding domain IGR PF09597.10 ORF62679 - 0.11 12.6 0.0 0.27 11.4 0.0 1.7 1 0 0 1 1 1 0 IGR protein motif AcetylCoA_hydro PF02550.15 ORF6106 - 0.015 15.3 0.1 0.023 14.7 0.1 1.3 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase N-terminal domain DUF3486 PF11985.8 ORF6106 - 0.039 14.4 0.5 0.056 13.9 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) HWE_HK PF07536.14 ORF6106 - 0.053 14.2 0.0 0.087 13.5 0.0 1.3 1 0 0 1 1 1 0 HWE histidine kinase Cor1 PF04803.12 ORF6106 - 0.3 11.3 5.1 0.27 11.5 1.4 2.1 2 0 0 2 2 2 0 Cor1/Xlr/Xmr conserved region Tyr-DNA_phospho PF06087.12 ORF60311 - 0.01 14.8 0.2 0.012 14.5 0.2 1.1 1 0 0 1 1 1 0 Tyrosyl-DNA phosphodiesterase DUF2517 PF10725.9 ORF58642 - 0.066 13.0 0.1 0.21 11.4 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2517) MFS_1 PF07690.16 ORF57846 - 5.6e-16 58.4 14.3 6.7e-16 58.2 14.3 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF57846 - 0.044 12.7 17.3 0.013 14.4 9.1 2.0 1 1 1 2 2 2 0 Sugar (and other) transporter MFS_3 PF05977.13 ORF57846 - 0.13 10.6 5.6 1.1 7.6 3.5 2.1 2 0 0 2 2 2 0 Transmembrane secretion effector MFS_1_like PF12832.7 ORF57846 - 0.3 9.9 15.1 0.36 9.6 15.1 1.1 1 0 0 1 1 1 0 MFS_1 like family OATP PF03137.20 ORF57846 - 3.5 5.8 14.9 2.4 6.3 8.0 2.1 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family COMM_domain PF07258.14 ORF55878 - 2.3e-13 50.1 2.6 5e-13 49.0 2.6 1.5 1 0 0 1 1 1 1 COMM domain NPV_P10 PF05531.12 ORF55878 - 0.019 15.4 3.7 0.041 14.3 3.7 1.5 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein CREPT PF16566.5 ORF55878 - 0.025 14.7 0.8 0.047 13.9 0.5 1.6 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Vip3A_N PF12495.8 ORF55878 - 0.057 13.3 0.7 0.057 13.3 0.7 1.8 2 0 0 2 2 2 0 Vegetative insecticide protein 3A N terminal UPF0302 PF08864.10 ORF54529 - 0.049 13.7 0.2 0.078 13.1 0.2 1.3 1 0 0 1 1 1 0 UPF0302 domain Methyltransf_25 PF13649.6 ORF52908 - 1.8e-13 51.0 0.1 4.1e-13 49.8 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF52908 - 1.2e-12 48.3 0.1 9.7e-12 45.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF52908 - 1.1e-09 39.0 0.0 2.1e-09 38.0 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF52908 - 6.3e-09 35.8 0.0 8.9e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF52908 - 8.6e-08 32.2 0.0 1.1e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF52908 - 7.7e-05 22.4 0.0 0.0001 22.0 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) DUF4909 PF16253.5 ORF52908 - 0.0021 17.9 0.0 0.0036 17.1 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4909) Methyltransf_8 PF05148.15 ORF52908 - 0.019 14.9 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase DUF938 PF06080.12 ORF52908 - 0.03 14.1 0.0 0.055 13.2 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Aa_trans PF01490.18 ORF52822 - 1.7e-15 56.7 11.8 1.9e-15 56.5 11.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF805 PF05656.14 ORF52822 - 7.2 7.1 13.7 12 6.4 0.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF805) zf-C2HE PF16278.5 ORF52611 - 0.096 13.2 0.4 0.19 12.2 0.2 1.7 1 1 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger Phage_T4_Ndd PF06591.11 ORF49048 - 0.017 14.9 0.0 0.033 14.0 0.0 1.4 1 0 0 1 1 1 0 T4-like phage nuclear disruption protein (Ndd) BMF PF15185.6 ORF47032 - 0.089 12.5 2.3 0.11 12.2 2.3 1.3 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis DUF5348 PF17295.2 ORF47032 - 0.17 11.8 0.5 12 5.9 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF5348) DUF2510 PF10708.9 ORF47032 - 0.85 9.4 4.8 5.7 6.8 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2510) Tyr-DNA_phospho PF06087.12 ORF44983 - 0.01 14.8 0.2 0.012 14.5 0.2 1.1 1 0 0 1 1 1 0 Tyrosyl-DNA phosphodiesterase Tyr-DNA_phospho PF06087.12 ORF43443 - 0.01 14.8 0.2 0.012 14.5 0.2 1.1 1 0 0 1 1 1 0 Tyrosyl-DNA phosphodiesterase HTH_Tnp_1 PF01527.20 ORF4303 - 1.6e-12 47.5 1.2 3.5e-12 46.4 0.9 1.7 2 0 0 2 2 2 1 Transposase LZ_Tnp_IS481 PF13011.6 ORF4303 - 0.0018 18.7 0.0 0.0041 17.6 0.0 1.6 1 0 0 1 1 1 1 leucine-zipper of insertion element IS481 HTH_29 PF13551.6 ORF4303 - 0.004 17.1 0.3 0.012 15.7 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 ORF4303 - 0.0045 17.1 0.0 0.009 16.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF4303 - 0.0077 16.0 0.0 0.016 15.0 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_17 PF12728.7 ORF4303 - 0.14 12.4 0.0 0.23 11.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Ribosomal_L6 PF00347.23 ORF42833 - 7.4e-15 55.4 4.7 2.8e-09 37.5 1.4 2.3 2 0 0 2 2 2 2 Ribosomal protein L6 AcetylCoA_hydro PF02550.15 ORF40596 - 0.015 15.3 0.1 0.023 14.7 0.1 1.3 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase N-terminal domain DUF3486 PF11985.8 ORF40596 - 0.039 14.4 0.5 0.056 13.9 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) HWE_HK PF07536.14 ORF40596 - 0.053 14.2 0.0 0.087 13.5 0.0 1.3 1 0 0 1 1 1 0 HWE histidine kinase Cor1 PF04803.12 ORF40596 - 0.3 11.3 5.1 0.27 11.5 1.4 2.1 2 0 0 2 2 2 0 Cor1/Xlr/Xmr conserved region DUF4401 PF14351.6 ORF40503 - 0.043 13.1 0.0 0.061 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4401) DOT1 PF08123.13 ORF35269 - 1.2e-09 38.0 0.0 1.6e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Histone methylation protein DOT1 MTS PF05175.14 ORF35269 - 0.0081 15.7 0.0 0.026 14.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 ORF35269 - 0.014 15.2 0.0 0.02 14.7 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain ChuX_HutX PF06228.13 ORF35269 - 0.14 12.0 0.0 0.24 11.2 0.0 1.6 1 0 0 1 1 1 0 Haem utilisation ChuX/HutX Methyltransf_11 PF08241.12 ORF35269 - 0.14 12.8 0.0 2.2 9.0 0.0 2.4 2 1 0 2 2 2 0 Methyltransferase domain Methyltransf_25 PF13649.6 ORF35269 - 0.16 12.7 0.0 0.32 11.7 0.0 1.7 2 1 0 2 2 2 0 Methyltransferase domain IFP_35_N PF07334.13 ORF33095 - 0.42 10.7 6.0 0.17 12.0 1.2 2.4 2 1 1 3 3 3 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Spc7 PF08317.11 ORF33095 - 2 7.2 11.5 5 5.9 2.3 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein DHHC PF01529.20 ORF32981 - 1.3e-27 96.5 22.7 1.9e-27 96.0 22.7 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase Tir_receptor_M PF03549.14 ORF31586 - 0.03 14.7 0.4 0.073 13.4 0.0 1.9 2 1 0 2 2 2 0 Translocated intimin receptor (Tir) intimin-binding domain FeoB_Cyto PF17910.1 ORF31586 - 1.4 9.5 9.8 3.2 8.4 2.3 2.4 1 1 1 2 2 2 0 FeoB cytosolic helical domain ALMT PF11744.8 ORF31586 - 3.6 6.3 15.5 4.3 6.1 15.5 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Acyl-CoA_dh_1 PF00441.24 ORF29823 - 4.7e-33 114.5 4.8 5.5e-33 114.3 4.8 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF29823 - 5.5e-11 42.9 6.2 7.4e-11 42.5 6.2 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain EF-hand_6 PF13405.6 ORF28984 - 5.1e-11 41.6 14.1 0.016 15.1 0.4 4.8 4 1 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF28984 - 1.1e-09 38.6 10.8 4.3e-07 30.3 1.3 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF28984 - 1.2e-09 37.8 7.5 4.4e-07 29.6 1.6 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF28984 - 2.6e-09 36.0 16.2 0.00068 19.0 0.5 4.8 4 2 0 4 4 4 3 EF hand EF-hand_5 PF13202.6 ORF28984 - 8.8e-08 31.3 7.1 0.00076 18.9 0.0 4.1 3 1 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF28984 - 0.043 14.1 1.0 1.8 8.9 0.3 2.6 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Glyco_hydro_11 PF00457.17 ORF28984 - 0.077 12.6 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 11 EF-hand_4 PF12763.7 ORF28984 - 0.087 12.8 3.6 0.14 12.1 0.4 2.6 2 2 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand CBM_25 PF03423.13 ORF28981 - 0.039 14.2 0.7 0.081 13.2 0.7 1.6 1 0 0 1 1 1 0 Carbohydrate binding domain (family 25) DUF4381 PF14316.6 ORF25502 - 0.016 15.4 0.1 0.016 15.4 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) DUF4834 PF16118.5 ORF25502 - 0.051 14.5 0.2 0.29 12.1 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) DUF3328 PF11807.8 ORF25502 - 0.12 12.1 0.2 0.36 10.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3328) TrmE_N PF10396.9 ORF25406 - 0.047 14.0 0.0 0.083 13.2 0.0 1.5 1 0 0 1 1 1 0 GTP-binding protein TrmE N-terminus Meleagrin PF08189.11 ORF2443 - 0.024 14.3 0.0 0.072 12.8 0.0 1.8 1 0 0 1 1 1 0 Meleagrin/Cygnin family Folate_rec PF03024.14 ORF23694 - 0.03 14.2 6.1 0.044 13.6 6.1 1.2 1 0 0 1 1 1 0 Folate receptor family Bestrophin PF01062.21 ORF23646 - 3.9e-12 46.2 0.0 5e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel RE_XcyI PF09571.10 ORF23294 - 0.087 12.1 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 XcyI restriction endonuclease Orf78 PF06024.12 ORF18749 - 0.043 14.1 6.1 0.089 13.1 6.1 1.4 1 0 0 1 1 1 0 Orf78 (ac78) DUF5401 PF17380.2 ORF18749 - 0.084 10.9 0.6 0.11 10.5 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) MCPVI PF02993.14 ORF17935 - 0.072 12.9 0.6 0.098 12.5 0.6 1.1 1 0 0 1 1 1 0 Minor capsid protein VI ALMT PF11744.8 ORF17935 - 0.87 8.3 10.0 1 8.1 10.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter FG-GAP PF01839.23 ORF17295 - 3.3e-08 33.5 1.2 0.0018 18.3 0.1 2.4 2 0 0 2 2 2 2 FG-GAP repeat VCBS PF13517.6 ORF17295 - 9e-08 32.6 3.2 0.0027 18.3 1.1 2.4 2 0 0 2 2 2 2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella FixH PF05751.11 ORF16046 - 0.005 16.9 0.4 0.0072 16.3 0.4 1.2 1 0 0 1 1 1 1 FixH DUF4692 PF15763.5 ORF16046 - 0.0085 16.6 4.3 0.02 15.4 2.2 2.1 1 1 0 2 2 2 1 Regulator of human erythroid cell expansion (RHEX) DUF3278 PF11683.8 ORF16046 - 0.022 14.8 0.9 0.047 13.8 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3278) DUF4538 PF15061.6 ORF16046 - 0.023 14.4 0.3 0.074 12.8 0.3 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) Arch_flagellin PF01917.16 ORF16046 - 0.026 14.7 0.7 0.038 14.2 0.5 1.4 1 1 0 1 1 1 0 Archaebacterial flagellin Nucleoside_tran PF01733.18 ORF16046 - 0.14 11.5 5.3 0.12 11.7 3.9 1.6 1 1 1 2 2 2 0 Nucleoside transporter SID-1_RNA_chan PF13965.6 ORF16046 - 0.19 10.1 10.8 0.28 9.5 10.8 1.4 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 Mem_trans PF03547.18 ORF16046 - 0.22 9.9 6.0 0.29 9.5 5.5 1.4 1 1 0 1 1 1 0 Membrane transport protein TssO PF17561.2 ORF16046 - 0.4 10.8 14.6 3.5 7.7 12.9 2.2 1 1 1 2 2 2 0 Type VI secretion system, TssO O-antigen_lig PF13425.6 ORF16046 - 0.45 9.3 8.4 0.53 9.0 8.4 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein TRAP-gamma PF07074.12 ORF16046 - 0.77 9.3 7.3 0.13 11.8 3.0 1.9 1 1 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) OSTbeta PF15048.6 ORF16046 - 1.1 9.4 8.8 3.6 7.7 8.8 1.9 1 1 0 1 1 1 0 Organic solute transporter subunit beta protein TRAP_alpha PF03896.16 ORF16046 - 1.7 7.8 8.7 0.084 12.1 1.4 2.0 1 1 0 2 2 2 0 Translocon-associated protein (TRAP), alpha subunit PTPlike_phytase PF14566.6 ORF16046 - 2.6 8.2 12.4 2 8.5 1.9 2.3 1 1 1 2 2 2 0 Inositol hexakisphosphate PalH PF08733.10 ORF16046 - 2.7 6.9 6.4 4.7 6.1 6.4 1.5 1 1 0 1 1 1 0 PalH/RIM21 DUF2681 PF10883.8 ORF16046 - 2.9 8.4 12.9 0.086 13.3 2.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF2681) PdaC PF13739.6 ORF16046 - 5.3 8.1 11.7 1.1 10.3 1.9 2.4 1 1 1 2 2 2 0 Deacetylase PdaC FeoB_associated PF12669.7 ORF15925 - 0.076 13.4 2.8 0.17 12.3 0.6 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein Ribosomal_L6 PF00347.23 ORF15809 - 7.4e-15 55.4 4.7 2.8e-09 37.5 1.4 2.3 2 0 0 2 2 2 2 Ribosomal protein L6 CobA_CobO_BtuR PF02572.15 ORF151528 - 5.9e-61 205.7 0.0 7.5e-61 205.4 0.0 1.1 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Co_AT_N PF12557.8 ORF151528 - 3.1e-06 27.0 7.6 3.1e-06 27.0 7.6 2.2 3 0 0 3 3 3 1 Cob(I)alamin adenosyltransferase N terminal DUF3502 PF12010.8 ORF151528 - 0.017 15.8 0.0 0.029 15.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) ResIII PF04851.15 ORF151528 - 0.046 13.7 0.4 0.11 12.5 0.4 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Smr PF01713.21 ORF151528 - 0.048 14.0 0.3 1.6 9.1 0.0 2.3 2 0 0 2 2 2 0 Smr domain IstB_IS21 PF01695.17 ORF151528 - 0.13 12.0 0.2 3 7.5 0.1 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SSE PF00437.20 ORF151528 - 0.14 11.2 0.1 0.24 10.4 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein NADH-G_4Fe-4S_3 PF10588.9 ORF149391 - 0.029 13.9 0.5 0.066 12.8 0.5 1.6 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF2496 PF10689.9 ORF148635 - 0.086 12.6 0.1 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2496) Phage_NinH PF06322.11 ORF147761 - 0.14 12.1 0.2 0.3 11.0 0.2 1.5 1 0 0 1 1 1 0 Phage NinH protein UCR_Fe-S_N PF10399.9 ORF147761 - 5.6 6.4 6.5 13 5.2 6.5 1.7 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AIRS_C PF02769.22 ORF144477 - 3.7e-10 40.2 0.0 4.8e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain DUF1581 PF07619.11 ORF143437 - 0.044 13.9 0.2 0.11 12.7 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1581) Gar1 PF04410.14 ORF143048 - 2e-21 76.4 0.0 2.5e-21 76.1 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region RCC1_2 PF13540.6 ORF140287 - 7.1e-10 38.4 8.1 0.0085 15.9 0.0 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat GRDA PF04723.14 ORF140287 - 0.056 13.2 0.0 8.7 6.1 0.0 2.4 1 1 1 2 2 2 0 Glycine reductase complex selenoprotein A PseudoU_synth_2 PF00849.22 ORF139911 - 3.2e-05 24.1 0.0 4.3e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase Siva PF05458.12 ORF138959 - 0.23 11.1 2.9 0.29 10.8 1.9 1.6 1 1 1 2 2 2 0 Cd27 binding protein (Siva) Gar1 PF04410.14 ORF13874 - 2e-21 76.4 0.0 2.5e-21 76.1 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region FeS PF04060.13 ORF13706 - 0.018 14.7 0.3 0.32 10.7 0.1 2.4 2 0 0 2 2 2 0 Putative Fe-S cluster zf-CCHC_4 PF14392.6 ORF137029 - 0.00013 21.6 4.4 0.12 12.2 0.6 2.3 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC PF00098.23 ORF137029 - 0.00019 21.4 8.2 0.0048 16.9 1.6 2.3 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF137029 - 0.012 15.3 10.4 0.14 11.9 1.8 2.3 2 0 0 2 2 2 0 C2H2 zinc-finger CRISPR_assoc PF08798.11 ORF137029 - 0.048 13.8 6.2 0.068 13.3 6.2 1.4 1 1 0 1 1 1 0 CRISPR associated protein Fer4_8 PF13183.6 ORF137029 - 0.34 11.4 6.0 0.29 11.6 1.4 2.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain zf-CCHC_6 PF15288.6 ORF137029 - 2.5 8.0 8.2 7.7 6.4 0.5 2.5 2 0 0 2 2 2 0 Zinc knuckle SPRY PF00622.28 ORF133514 - 0.00068 19.7 0.0 0.0011 19.1 0.0 1.3 1 0 0 1 1 1 1 SPRY domain FKBP_C PF00254.28 ORF133339 - 1e-09 38.6 0.0 1.6e-09 38.0 0.0 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Tricho_coat PF05892.11 ORF132804 - 0.036 13.8 2.0 0.45 10.2 0.1 2.3 2 0 0 2 2 2 0 Trichovirus coat protein ODAPH PF15848.5 ORF13269 - 0.12 12.8 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 Odontogenesis associated phosphoprotein Kelch_2 PF07646.15 ORF131988 - 0.04 13.9 0.1 1.2 9.3 0.0 2.5 2 0 0 2 2 2 0 Kelch motif Kelch_1 PF01344.25 ORF131988 - 0.043 13.4 0.3 0.14 11.8 0.3 1.9 1 1 0 1 1 1 0 Kelch motif TAFH PF07531.14 ORF129807 - 0.041 14.0 0.2 0.072 13.2 0.2 1.3 1 0 0 1 1 1 0 NHR1 homology to TAF TRAM_LAG1_CLN8 PF03798.16 ORF126396 - 1.1e-06 28.5 7.8 2.2e-06 27.6 7.8 1.5 1 1 0 1 1 1 1 TLC domain Neurochondrin PF05536.11 ORF124861 - 0.0041 15.6 0.1 0.0052 15.2 0.1 1.1 1 0 0 1 1 1 1 Neurochondrin Clavanin PF05452.11 ORF124861 - 0.0093 16.2 0.3 0.022 14.9 0.1 1.7 2 0 0 2 2 2 1 Clavanin Ribosomal_L27A PF00828.19 ORF124861 - 0.011 16.4 0.1 0.019 15.6 0.1 1.5 1 1 0 1 1 1 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Methyltransf_12 PF08242.12 ORF124861 - 0.062 14.0 1.2 0.32 11.8 0.0 2.6 2 1 0 2 2 2 0 Methyltransferase domain Flu_M1 PF00598.19 ORF124861 - 0.1 12.1 0.1 0.34 10.4 0.0 1.8 1 1 1 2 2 2 0 Influenza Matrix protein (M1) Mito_fiss_reg PF05308.11 ORF118592 - 0.038 14.1 0.2 0.058 13.5 0.2 1.4 1 0 0 1 1 1 0 Mitochondrial fission regulator ADK PF00406.22 ORF118343 - 4e-45 153.6 0.0 4.8e-45 153.3 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF118343 - 5.5e-37 127.2 0.1 7e-37 126.9 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF118343 - 1.3e-11 45.2 0.1 1.8e-11 44.7 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF118343 - 1.6e-08 34.8 0.0 2.7e-08 34.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 ORF118343 - 8.1e-06 25.6 0.2 0.0032 17.2 0.1 2.1 2 0 0 2 2 2 2 Thymidylate kinase Zeta_toxin PF06414.12 ORF118343 - 0.00012 21.5 0.0 0.00027 20.3 0.0 1.5 1 1 0 1 1 1 1 Zeta toxin AAA_19 PF13245.6 ORF118343 - 0.012 15.9 1.9 0.13 12.5 0.3 2.2 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 ORF118343 - 0.025 14.2 0.0 0.08 12.6 0.0 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Ploopntkinase3 PF18751.1 ORF118343 - 0.031 14.2 0.0 0.051 13.5 0.0 1.5 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 ATP_bind_1 PF03029.17 ORF118343 - 0.1 12.3 1.0 0.57 9.9 0.2 2.0 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein PAS_7 PF12860.7 ORF118343 - 0.15 12.3 0.1 0.35 11.1 0.1 1.6 1 0 0 1 1 1 0 PAS fold ATPase PF06745.13 ORF118343 - 0.16 11.3 1.6 0.68 9.2 0.2 2.4 3 0 0 3 3 3 0 KaiC Fib_alpha PF08702.10 ORF118177 - 0.00027 21.1 15.4 0.00027 21.1 15.4 2.5 1 1 2 3 3 3 1 Fibrinogen alpha/beta chain family Lebercilin PF15619.6 ORF118177 - 0.00066 19.4 36.5 0.0021 17.8 36.5 1.9 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease PKcGMP_CC PF16808.5 ORF118177 - 0.00099 18.9 4.6 0.00099 18.9 4.6 5.5 6 0 0 6 6 5 1 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_TATA_bd PF12325.8 ORF118177 - 0.0057 16.9 33.9 0.7 10.1 17.7 3.4 1 1 2 3 3 3 2 TATA element modulatory factor 1 TATA binding Ribosomal_L10 PF00466.20 ORF118177 - 0.0064 16.6 6.8 0.0064 16.6 6.8 1.9 2 0 0 2 2 1 1 Ribosomal protein L10 MAD PF05557.13 ORF118177 - 0.019 13.4 37.4 0.066 11.6 37.4 1.7 1 1 0 1 1 1 0 Mitotic checkpoint protein Fez1 PF06818.15 ORF118177 - 0.061 13.8 32.2 0.24 11.8 11.6 2.3 1 1 1 2 2 2 0 Fez1 BLOC1_2 PF10046.9 ORF118177 - 0.087 13.1 31.5 0.095 13.0 10.5 3.6 1 1 4 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 UPF0242 PF06785.11 ORF118177 - 0.38 10.8 41.4 25 4.9 29.9 2.8 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus ERM PF00769.19 ORF118177 - 0.74 9.6 32.8 0.056 13.3 26.9 2.1 2 1 0 2 2 2 0 Ezrin/radixin/moesin family DUF641 PF04859.12 ORF118177 - 1.3 9.3 31.6 2.3 8.6 6.8 3.2 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) HOOK PF05622.12 ORF118177 - 1.4 6.9 37.1 2.5 6.1 37.1 1.4 1 1 0 1 1 1 0 HOOK protein Jnk-SapK_ap_N PF09744.9 ORF118177 - 2.3 8.5 36.0 6.8 6.9 21.1 2.4 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 ADIP PF11559.8 ORF118177 - 3.2 7.8 36.4 0.47 10.5 17.1 2.4 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding HAP1_N PF04849.13 ORF118177 - 4.3 6.5 34.3 54 2.8 34.3 2.3 1 1 0 1 1 1 0 HAP1 N-terminal conserved region MCPsignal PF00015.21 ORF118177 - 4.3 7.1 11.0 1.7 8.4 3.0 2.4 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF1664 PF07889.12 ORF118177 - 5.1 7.2 22.6 1.5 8.9 5.0 3.6 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) DUF4407 PF14362.6 ORF118177 - 5.6 6.2 21.5 4.8e+02 -0.1 21.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) P4Ha_N PF08336.11 ORF118177 - 6.3 6.8 25.9 0.44 10.6 7.3 3.3 2 1 0 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region NPV_P10 PF05531.12 ORF118177 - 6.3 7.3 16.5 55 4.3 1.7 4.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF948 PF06103.11 ORF118177 - 6.5 7.1 13.8 8.4 6.7 6.6 3.3 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) FAM76 PF16046.5 ORF118177 - 7.9 5.7 28.3 23 4.2 28.3 1.7 1 1 0 1 1 1 0 FAM76 protein SLATT_3 PF18184.1 ORF118177 - 8.2 6.5 6.9 1.7 8.8 0.4 2.5 2 1 1 3 3 3 0 SMODS and SLOG-associating 2TM effector domain 3 XLF PF09302.11 ORF118177 - 9 6.4 21.7 5.4 7.2 5.2 3.7 1 1 1 3 3 3 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component DUF812 PF05667.11 ORF118177 - 9.7 4.9 35.2 22 3.8 35.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Orf78 PF06024.12 ORF116890 - 0.043 14.1 6.1 0.089 13.1 6.1 1.4 1 0 0 1 1 1 0 Orf78 (ac78) DUF5401 PF17380.2 ORF116890 - 0.084 10.9 0.6 0.11 10.5 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) CsrA PF02599.16 ORF116233 - 0.56 10.2 2.2 25 4.9 0.0 2.9 3 0 0 3 3 3 0 Global regulator protein family Acetyltransf_1 PF00583.25 ORF116059 - 4.2e-19 68.9 0.0 6.2e-19 68.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF116059 - 2.3e-12 47.1 0.0 6.2e-12 45.8 0.1 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF116059 - 9.5e-12 45.0 0.0 1.4e-11 44.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF116059 - 1.1e-07 32.0 0.0 4.8e-06 26.7 0.0 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF116059 - 1.3e-07 31.5 0.0 2.5e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_6 PF13480.7 ORF116059 - 2.2e-06 27.9 0.0 3.4e-06 27.3 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 ORF116059 - 0.006 16.3 0.0 0.0097 15.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_8 PF13523.6 ORF116059 - 0.0061 16.3 0.0 0.0092 15.7 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF116059 - 0.0074 17.0 0.0 0.0098 16.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF116059 - 0.02 15.1 0.0 0.038 14.1 0.0 1.5 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF116059 - 0.028 14.6 0.0 0.053 13.7 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 ORF116059 - 0.054 12.9 0.0 0.072 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_13 PF13880.6 ORF116059 - 0.09 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Evr1_Alr PF04777.13 ORF111857 - 9.6e-07 29.2 0.3 1.8e-06 28.3 0.3 1.6 1 1 0 1 1 1 1 Erv1 / Alr family Amb_V_allergen PF03913.13 ORF111857 - 0.011 15.6 2.7 0.017 15.1 0.2 2.3 2 0 0 2 2 2 0 Amb V Allergen Nitroreductase PF00881.24 ORF110364 - 4e-14 53.0 0.0 6.8e-14 52.3 0.0 1.3 1 1 0 1 1 1 1 Nitroreductase family HMGL-like PF00682.19 ORF109597 - 1e-40 140.0 0.9 1.3e-40 139.7 0.9 1.1 1 0 0 1 1 1 1 HMGL-like DmpG_comm PF07836.11 ORF109597 - 1.8e-31 107.4 0.2 3.2e-31 106.7 0.2 1.4 1 0 0 1 1 1 1 DmpG-like communication domain PAP2 PF01569.21 ORF108645 - 4e-14 52.5 2.6 7e-14 51.8 2.6 1.3 1 0 0 1 1 1 1 PAP2 superfamily WD40 PF00400.32 ORF107982 - 0.14 13.1 0.0 1.9 9.5 0.0 2.7 2 0 0 2 2 2 0 WD domain, G-beta repeat V-SNARE PF05008.15 ORF106597 - 2.5e-13 50.2 9.5 2.5e-13 50.2 9.5 2.8 2 1 0 3 3 3 1 Vesicle transport v-SNARE protein N-terminus Sec20 PF03908.13 ORF106597 - 6.5e-08 32.4 3.8 1.7e-06 27.8 0.0 2.8 2 2 1 3 3 3 1 Sec20 Laminin_I PF06008.14 ORF106597 - 0.00053 19.8 21.6 0.0048 16.6 8.5 2.1 2 0 0 2 2 2 2 Laminin Domain I ABC2_membrane_3 PF12698.7 ORF106597 - 0.0014 17.8 1.0 0.0019 17.4 1.0 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein DUF4755 PF15947.5 ORF106597 - 0.0052 16.8 3.0 0.0087 16.0 3.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4755) Strep_SA_rep PF06696.11 ORF106597 - 0.0054 16.7 1.0 0.016 15.2 1.0 1.9 1 0 0 1 1 1 1 Streptococcal surface antigen repeat V-SNARE_C PF12352.8 ORF106597 - 0.013 15.8 1.7 0.013 15.8 1.7 3.0 3 1 1 4 4 4 0 Snare region anchored in the vesicle membrane C-terminus DUF4600 PF15372.6 ORF106597 - 0.017 15.6 0.4 0.017 15.6 0.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4600) ACR_tran PF00873.19 ORF106597 - 0.14 9.8 7.1 0.16 9.6 7.1 1.1 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family PPR PF01535.20 ORF106597 - 0.91 9.9 4.9 1.1 9.6 0.5 3.1 3 0 0 3 3 3 0 PPR repeat ETRAMP PF09716.10 ORF106597 - 0.93 9.6 7.1 7.5 6.7 6.6 2.6 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) CCDC-167 PF15188.6 ORF106597 - 3.7 7.9 16.9 37 4.7 9.8 3.2 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF4398 PF14346.6 ORF106597 - 5.4 7.7 16.1 1.2 9.8 7.4 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4398) SRPRB PF09439.10 ORF1062 - 0.045 13.2 0.1 2.1 7.8 0.0 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit SRPRB PF09439.10 ORF106001 - 0.045 13.2 0.1 2.1 7.8 0.0 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit His_Phos_2 PF00328.22 ORF104656 - 0.072 12.4 3.7 0.086 12.2 3.7 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) Uds1 PF15456.6 ORF104656 - 2.1 8.5 6.4 4 7.6 6.4 1.4 1 0 0 1 1 1 0 Up-regulated During Septation # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks120.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks120.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks120.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks120.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:01:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TPR_1 PF00515.28 ORF104023 - 7.5e-06 25.5 5.5 0.016 15.0 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF104023 - 0.00038 20.4 5.9 0.015 15.4 0.1 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF104023 - 0.0039 17.5 4.9 3.2 8.1 0.0 3.4 3 1 0 3 3 3 2 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF104023 - 0.028 14.5 0.8 0.59 10.2 0.2 2.4 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 5 ANAPC3 PF12895.7 ORF104023 - 0.035 14.3 0.9 1.6 9.0 0.0 2.6 2 1 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF104023 - 0.035 14.8 0.3 4 8.2 0.1 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF104023 - 0.046 13.4 0.0 0.42 10.3 0.0 2.4 2 0 0 2 2 2 0 TPR repeat CTP_transf_like PF01467.26 ORF10308 - 1.6e-15 57.6 0.0 1.9e-15 57.3 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like DUF3652 PF12372.8 ORF10195 - 0.16 11.9 0.1 23 5.0 0.2 2.6 2 0 0 2 2 2 0 Huntingtin protein region Rootletin PF15035.6 ORF101146 - 0.00051 20.1 0.1 0.00057 20.0 0.1 1.1 1 0 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion GAS PF13851.6 ORF101146 - 0.00094 18.6 0.1 0.0013 18.1 0.1 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding bZIP_1 PF00170.21 ORF101146 - 0.012 15.7 0.3 0.036 14.1 0.1 1.8 1 1 1 2 2 2 0 bZIP transcription factor ZapB PF06005.12 ORF101146 - 0.02 15.3 4.5 0.12 12.8 4.7 1.9 1 1 0 1 1 1 0 Cell division protein ZapB APG6_N PF17675.1 ORF101146 - 0.036 14.6 1.2 0.052 14.1 1.2 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region ATG16 PF08614.11 ORF101146 - 0.037 14.3 0.9 0.052 13.8 0.9 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DivIC PF04977.15 ORF101146 - 0.067 13.0 1.2 5 7.0 0.3 2.2 1 1 1 2 2 2 0 Septum formation initiator Bac_rhodopsin PF01036.18 ORF101146 - 0.076 12.6 0.5 0.1 12.1 0.5 1.1 1 0 0 1 1 1 0 Bacteriorhodopsin-like protein Macoilin PF09726.9 ORF101146 - 0.11 11.1 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 Macoilin family UPF0449 PF15136.6 ORF101146 - 0.15 12.5 0.1 0.28 11.7 0.1 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 DUF1664 PF07889.12 ORF101146 - 0.18 11.8 0.6 0.3 11.1 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) bZIP_2 PF07716.15 ORF101146 - 0.6 10.2 2.8 12 6.1 0.2 2.2 1 1 1 2 2 2 0 Basic region leucine zipper DUF4223 PF13978.6 NODE_36728_length_583_cov_2.458029_g29553_i0reverse_frame_1 - 0.15 12.1 0.8 12 5.9 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4223) Gly-zipper_YMGG PF13441.6 NODE_36726_length_583_cov_2.687956_g29551_i0reverse_frame_1 - 0.00094 18.9 1.5 0.0014 18.3 1.5 1.2 1 0 0 1 1 1 1 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 NODE_36726_length_583_cov_2.687956_g29551_i0reverse_frame_1 - 0.073 12.9 9.4 0.11 12.4 9.4 1.2 1 0 0 1 1 1 0 Glycine zipper 2TM domain DUF5067 PF16729.5 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_1 - 0.085 12.8 0.8 0.16 11.9 0.5 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5067) zf-UDP PF14569.6 NODE_36719_length_583_cov_2.996350_g29544_i0reverse_frame_1 - 0.11 12.6 2.0 0.3 11.2 2.0 1.7 1 0 0 1 1 1 0 Zinc-binding RING-finger Helicase_PWI PF18149.1 NODE_36712_length_583_cov_89.012774_g29537_i0reverse_frame_1 - 0.16 12.1 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 N-terminal helicase PWI domain CdvA PF18822.1 NODE_36685_length_584_cov_2.664845_g29515_i0reverse_frame_1 - 0.64 9.9 5.6 0.32 10.8 0.3 2.3 2 1 0 2 2 2 0 CdvA-like coiled-coil domain Pkinase PF00069.25 NODE_36678_length_584_cov_3.409836_g29508_i0reverse_frame_1 - 4.3e-27 95.1 0.1 5.5e-27 94.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_36678_length_584_cov_3.409836_g29508_i0reverse_frame_1 - 2e-12 47.0 0.0 2.5e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase IGPS PF00218.21 NODE_36678_length_584_cov_3.409836_g29508_i0reverse_frame_1 - 0.024 13.8 0.0 0.041 13.1 0.0 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase FTA2 PF13095.6 NODE_36678_length_584_cov_3.409836_g29508_i0reverse_frame_1 - 0.047 13.3 0.0 0.7 9.5 0.0 2.1 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Toxin_13 PF07822.11 NODE_36655_length_584_cov_147.455373_g29486_i0reverse_frame_1 - 0.015 15.4 1.5 0.036 14.2 1.5 1.6 1 0 0 1 1 1 0 Neurotoxin B-IV-like protein Metallothio_PEC PF02068.16 NODE_36621_length_585_cov_79.345455_g29454_i0reverse_frame_1 - 2.8 8.4 10.6 2.9 8.3 6.6 2.1 2 0 0 2 2 2 0 Plant PEC family metallothionein DUF4210 PF13915.6 NODE_36616_length_585_cov_106.900000_g29449_i0forward_frame_1 - 0.062 13.9 0.0 0.13 12.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) Tryp_alpha_amyl PF00234.22 NODE_36615_length_585_cov_118.045455_g29448_i0reverse_frame_1 - 0.016 15.6 3.0 0.26 11.8 0.4 2.2 1 1 1 2 2 2 0 Protease inhibitor/seed storage/LTP family Gliadin PF13016.6 NODE_36615_length_585_cov_118.045455_g29448_i0reverse_frame_1 - 0.06 13.8 0.8 0.06 13.8 0.8 1.6 1 1 1 2 2 2 0 Cys-rich Gliadin N-terminal CcmD PF04995.14 NODE_36606_length_585_cov_193.345455_g29442_i0forward_frame_1 - 0.05 13.7 3.4 0.086 12.9 3.4 1.4 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Reticulon PF02453.17 NODE_36578_length_586_cov_4.372051_g29422_i0forward_frame_3 - 0.4 10.6 4.4 0.75 9.7 4.4 1.4 1 0 0 1 1 1 0 Reticulon Hepar_II_III_N PF16889.5 NODE_36566_length_586_cov_87.687840_g29410_i0reverse_frame_3 - 0.19 10.9 0.3 0.24 10.6 0.3 1.1 1 0 0 1 1 1 0 Heparinase II/III N-terminus Hydrolase PF00702.26 NODE_36548_length_586_cov_242.947368_g29394_i0reverse_frame_2 - 1.7e-08 35.0 0.1 2.6e-08 34.4 0.1 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 NODE_36548_length_586_cov_242.947368_g29394_i0reverse_frame_2 - 0.0066 16.5 0.0 0.016 15.3 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) HAD PF12710.7 NODE_36548_length_586_cov_242.947368_g29394_i0reverse_frame_2 - 0.05 14.0 0.0 0.074 13.4 0.0 1.4 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Cytokin_check_N PF10407.9 NODE_36543_length_586_cov_472.067151_g29389_i0reverse_frame_3 - 0.031 14.2 0.1 0.09 12.7 0.1 1.7 1 0 0 1 1 1 0 Cdc14 phosphatase binding protein N-terminus DUF2207 PF09972.9 NODE_36540_length_586_cov_991.575318_g29387_i0reverse_frame_3 - 0.26 10.0 1.9 0.31 9.7 1.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) YajC PF02699.15 NODE_36540_length_586_cov_991.575318_g29387_i0forward_frame_2 - 4.7 7.2 10.8 3.5 7.6 0.3 2.6 1 1 1 2 2 2 0 Preprotein translocase subunit zf-C2H2 PF00096.26 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 7.7e-08 32.4 10.1 4.4e-06 26.9 2.8 2.8 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 1.7e-07 31.3 6.2 0.0026 18.1 0.6 2.6 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 4.5e-05 23.9 8.2 0.0083 16.9 2.1 3.1 2 0 0 2 2 2 2 C2H2-type zinc finger zf-Di19 PF05605.12 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.0094 16.2 5.3 0.36 11.2 5.3 2.5 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_11 PF16622.5 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.015 15.0 0.2 0.015 15.0 0.2 2.6 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-BED PF02892.15 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.046 13.8 6.0 0.12 12.4 1.1 2.5 1 1 1 2 2 2 0 BED zinc finger zf-RING_7 PF02591.15 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.046 13.9 2.9 3.6 7.8 0.1 3.8 5 0 0 5 5 5 0 C4-type zinc ribbon domain zf-C2HC_2 PF13913.6 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 0.51 10.3 6.7 5.9 6.9 0.4 2.7 2 1 0 2 2 2 0 zinc-finger of a C2HC-type zf-met PF12874.7 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 1.9 9.0 6.8 15 6.1 1.0 2.9 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 NODE_36520_length_587_cov_24.221014_g29373_i0reverse_frame_2 - 2 8.8 7.1 2.3 8.6 1.4 2.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding NPCC PF08058.11 NODE_36514_length_587_cov_76.068841_g29368_i0reverse_frame_2 - 0.46 10.5 3.8 1.3 9.0 3.8 1.7 1 1 0 1 1 1 0 Nuclear pore complex component Myb_DNA-bind_6 PF13921.6 NODE_36514_length_587_cov_76.068841_g29368_i0forward_frame_3 - 6.6 7.1 10.2 3.3 8.0 0.4 2.9 2 1 1 3 3 3 0 Myb-like DNA-binding domain Lbh PF15317.6 NODE_36506_length_587_cov_94.960145_g29360_i0reverse_frame_3 - 0.11 13.3 0.9 17 6.3 0.4 2.2 2 0 0 2 2 2 0 Cardiac transcription factor regulator, Developmental protein Lig_chan PF00060.26 NODE_36506_length_587_cov_94.960145_g29360_i0forward_frame_2 - 1.7 8.5 6.4 0.9 9.4 4.2 1.7 1 1 0 1 1 1 0 Ligand-gated ion channel Ribosomal_L26 PF16906.5 NODE_36502_length_587_cov_114.829710_g29356_i0forward_frame_3 - 0.088 13.3 1.0 0.2 12.1 0.0 2.0 2 1 0 2 2 2 0 Ribosomal proteins L26 eukaryotic, L24P archaeal BDV_M PF16520.5 NODE_36502_length_587_cov_114.829710_g29356_i0forward_frame_2 - 0.014 15.7 0.1 0.022 15.1 0.1 1.3 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae LcrG PF07216.12 NODE_36495_length_587_cov_150.184783_g29349_i0reverse_frame_2 - 0.099 12.6 0.3 1.1 9.2 0.0 2.1 2 0 0 2 2 2 0 LcrG protein TcpA PF05946.12 NODE_36470_length_588_cov_2.215190_g29328_i0reverse_frame_2 - 0.13 12.4 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Toxin-coregulated pilus subunit TcpA STAG PF08514.11 NODE_36468_length_588_cov_2.632911_g29326_i0reverse_frame_2 - 0.072 13.0 4.3 0.12 12.3 4.3 1.5 1 1 0 1 1 1 0 STAG domain BTB PF00651.31 NODE_36468_length_588_cov_2.632911_g29326_i0forward_frame_2 - 0.00029 21.0 3.9 0.00093 19.4 0.2 2.3 2 0 0 2 2 2 2 BTB/POZ domain Biotin_lipoyl PF00364.22 NODE_36458_length_588_cov_4.759494_g29316_i0forward_frame_2 - 3.5e-05 23.6 0.1 8.9e-05 22.3 0.0 1.7 2 0 0 2 2 2 1 Biotin-requiring enzyme Cytochrome_CBB3 PF13442.6 NODE_36458_length_588_cov_4.759494_g29316_i0forward_frame_2 - 0.19 12.0 0.0 0.19 12.0 0.0 1.9 2 0 0 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III SAP PF02037.27 NODE_36455_length_588_cov_72.678119_g29313_i0reverse_frame_2 - 0.00021 20.9 2.7 0.00045 19.9 1.3 2.2 1 1 1 2 2 2 1 SAP domain Armet PF10208.9 NODE_36455_length_588_cov_72.678119_g29313_i0reverse_frame_2 - 0.0016 18.4 0.0 0.0024 17.8 0.0 1.2 1 0 0 1 1 1 1 Degradation arginine-rich protein for mis-folding AMP-binding PF00501.28 NODE_36444_length_588_cov_96.555154_g29302_i0reverse_frame_3 - 1.4e-14 53.6 0.0 1.6e-14 53.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme DUF998 PF06197.13 NODE_36444_length_588_cov_96.555154_g29302_i0reverse_frame_3 - 0.086 12.4 0.8 0.12 11.9 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF998) FNIP PF05725.12 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_3 - 4.2e-40 135.6 18.7 2.4e-12 46.8 0.2 4.6 3 1 0 4 4 4 4 FNIP Repeat LRR_5 PF13306.6 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_3 - 0.0012 18.8 0.8 0.18 11.8 0.1 2.2 1 1 1 2 2 2 2 BspA type Leucine rich repeat region (6 copies) ShK PF01549.24 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_3 - 0.22 12.1 2.1 0.36 11.4 2.1 1.4 1 0 0 1 1 1 0 ShK domain-like W_rich_C PF07483.11 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_3 - 0.9 9.7 3.6 39 4.5 0.1 3.6 2 2 1 4 4 4 0 Tryptophan-rich Synechocystis species C-terminal domain Glyco_hydro_65C PF03633.15 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_3 - 1 9.3 5.7 38 4.3 0.0 4.8 6 0 0 6 6 6 0 Glycosyl hydrolase family 65, C-terminal domain FNIP PF05725.12 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_2 - 7.8e-08 32.4 0.1 1.5e-07 31.5 0.1 1.5 1 0 0 1 1 1 1 FNIP Repeat DUF4880 PF16220.5 NODE_36421_length_588_cov_282.479204_g29280_i0reverse_frame_2 - 0.063 13.2 6.5 8.7 6.3 0.1 4.5 5 0 0 5 5 5 0 Domain of unknown function (DUF4880) DUF1476 PF07345.11 NODE_36421_length_588_cov_282.479204_g29280_i0forward_frame_3 - 0.1 13.0 6.4 48 4.4 0.1 5.1 2 2 4 6 6 6 0 ATPase inhibitor subunit zeta Peptidase_M16_C PF05193.21 NODE_36421_length_588_cov_282.479204_g29280_i0forward_frame_3 - 0.14 12.2 0.0 21 5.1 0.0 3.2 2 1 1 3 3 3 0 Peptidase M16 inactive domain HalX PF08663.10 NODE_36421_length_588_cov_282.479204_g29280_i0forward_frame_2 - 0.0065 16.8 20.9 5.5 7.4 0.1 5.7 5 2 1 6 6 6 4 HalX domain TOH_N PF12549.8 NODE_36421_length_588_cov_282.479204_g29280_i0forward_frame_2 - 0.061 13.2 0.2 5.6 6.9 0.0 3.4 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal AOX PF01786.17 NODE_36408_length_588_cov_1301.001808_g29267_i0forward_frame_3 - 0.1 12.1 1.3 0.16 11.5 1.3 1.3 1 0 0 1 1 1 0 Alternative oxidase Plasmodium_Vir PF05795.11 ORF99083 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF99083 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF99083 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF99083 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF99083 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF99083 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF99083 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF99083 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF99083 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF99083 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF99083 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF99083 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF99083 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF99083 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF99083 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF99083 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF99083 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF99083 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF99083 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF99083 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF99083 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF99083 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF99083 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF99083 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF99083 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF99083 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF99083 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF99083 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF99083 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF99083 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF99083 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF99083 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF99083 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 PMR5N PF14416.6 ORF98813 - 1.6 9.1 7.4 1.8 8.9 0.8 2.6 2 1 0 2 2 2 0 PMR5 N terminal Domain DnaJ PF00226.31 ORF9730 - 1.1e-19 70.3 0.5 3e-19 68.9 0.2 1.8 2 0 0 2 2 2 1 DnaJ domain zf-RING_2 PF13639.6 ORF97043 - 4.5e-10 39.7 12.3 4.5e-10 39.7 12.3 2.0 3 0 0 3 3 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF97043 - 5.4e-08 32.5 5.7 1.4e-07 31.1 5.7 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF97043 - 9.8e-07 28.7 5.3 9.8e-07 28.7 5.3 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF97043 - 1.2e-05 25.2 8.4 2e-05 24.4 7.5 1.9 1 1 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF97043 - 1.8e-05 24.6 7.7 0.00014 21.8 7.7 2.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF97043 - 0.0001 22.5 9.8 0.0001 22.5 9.8 2.1 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF97043 - 0.00015 21.6 8.6 0.00042 20.1 8.6 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF97043 - 0.00024 20.9 11.3 0.00076 19.3 11.3 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF97043 - 0.00028 20.7 8.9 0.00078 19.3 8.9 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF97043 - 0.0016 18.3 2.6 0.0016 18.3 2.6 2.5 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF97043 - 0.0077 16.0 13.0 0.4 10.5 9.8 2.5 2 0 0 2 2 2 2 RING/Ubox like zinc-binding domain Vps39_2 PF10367.9 ORF97043 - 0.017 15.5 0.6 0.017 15.5 0.6 2.0 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 Laminin_G_2 PF02210.24 ORF94481 - 0.058 14.0 0.1 0.088 13.4 0.1 1.4 1 0 0 1 1 1 0 Laminin G domain 53-BP1_Tudor PF09038.10 ORF94481 - 0.086 12.8 0.1 0.25 11.3 0.1 1.9 2 0 0 2 2 2 0 Tumour suppressor p53-binding protein-1 Tudor YlbD_coat PF14071.6 ORF92604 - 0.045 14.0 2.0 0.045 14.0 2.0 1.8 2 0 0 2 2 2 0 Putative coat protein MCU PF04678.13 ORF92210 - 1.4e-14 54.6 3.5 1.4e-14 54.6 3.5 1.7 1 1 1 2 2 2 1 Mitochondrial calcium uniporter ABC_tran_CTD PF16326.5 ORF92210 - 1.5 9.2 10.2 15 5.9 0.4 3.0 2 1 0 2 2 2 0 ABC transporter C-terminal domain Gene66 PF02053.15 ORF92130 - 0.012 15.3 0.0 0.02 14.5 0.0 1.5 1 0 0 1 1 1 0 Gene 66 (IR5) protein CS PF04969.16 ORF91844 - 1.1e-08 35.9 0.0 2.8e-08 34.7 0.0 1.7 2 0 0 2 2 2 1 CS domain DUF4081 PF13312.6 ORF90668 - 0.091 13.0 0.1 0.18 12.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4081) CLIP_SPH_mas PF18398.1 ORF90668 - 0.26 11.7 3.1 0.52 10.8 0.0 2.6 3 0 0 3 3 3 0 Clip-domain serine protease homolog masquerade IGFBP PF00219.18 ORF88969 - 0.4 11.4 6.1 0.24 12.0 1.4 2.4 2 0 0 2 2 2 0 Insulin-like growth factor binding protein BolA PF01722.18 ORF86128 - 0.18 12.1 0.0 0.32 11.3 0.0 1.3 1 0 0 1 1 1 0 BolA-like protein YTH PF04146.15 ORF83393 - 0.068 13.1 0.1 0.58 10.1 0.0 2.0 2 0 0 2 2 2 0 YT521-B-like domain MNNL PF07657.13 ORF80331 - 1.1 9.4 14.0 0.19 11.8 2.1 2.3 2 0 0 2 2 2 0 N terminus of Notch ligand DUF229 PF02995.17 ORF79916 - 1.8e-17 63.1 5.8 2.2e-17 62.8 5.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF79916 - 1.2e-05 24.9 0.4 1.6e-05 24.5 0.4 1.2 1 0 0 1 1 1 1 Sulfatase zf-RING_2 PF13639.6 ORF7982 - 4.5e-10 39.7 12.3 4.5e-10 39.7 12.3 2.0 3 0 0 3 3 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF7982 - 5.4e-08 32.5 5.7 1.4e-07 31.1 5.7 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF7982 - 9.8e-07 28.7 5.3 9.8e-07 28.7 5.3 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF7982 - 1.2e-05 25.2 8.4 2e-05 24.4 7.5 1.9 1 1 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF7982 - 1.8e-05 24.6 7.7 0.00014 21.8 7.7 2.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF7982 - 0.0001 22.5 9.8 0.0001 22.5 9.8 2.1 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF7982 - 0.00015 21.6 8.6 0.00042 20.1 8.6 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF7982 - 0.00024 20.9 11.3 0.00076 19.3 11.3 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF7982 - 0.00028 20.7 8.9 0.00078 19.3 8.9 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF7982 - 0.0016 18.3 2.6 0.0016 18.3 2.6 2.5 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF7982 - 0.0077 16.0 13.0 0.4 10.5 9.8 2.5 2 0 0 2 2 2 2 RING/Ubox like zinc-binding domain Vps39_2 PF10367.9 ORF7982 - 0.017 15.5 0.6 0.017 15.5 0.6 2.0 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 zf-Tim10_DDP PF02953.15 ORF79633 - 0.82 9.4 11.7 5.4 6.8 2.2 2.7 1 1 1 2 2 2 0 Tim10/DDP family zinc finger LAL_C2 PF18603.1 ORF77384 - 0.09 12.9 0.0 0.71 10.1 0.0 2.1 2 0 0 2 2 2 0 L-amino acid ligase C-terminal domain 2 EGF_Tenascin PF18720.1 ORF77187 - 3.1 7.9 6.2 0.91 9.6 2.6 2.0 2 0 0 2 2 2 0 Tenascin EGF domain T6SS_TssG PF06996.11 ORF77003 - 0.055 12.7 0.0 0.079 12.2 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion, TssG Plasmodium_Vir PF05795.11 ORF75403 - 0.00095 18.7 1.9 0.0012 18.3 1.9 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF75403 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF75403 - 0.0082 16.4 0.0 0.25 11.7 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) CDC45 PF02724.14 ORF75403 - 0.014 13.8 13.8 0.016 13.6 13.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Serinc PF03348.15 ORF75403 - 0.023 13.6 3.9 0.19 10.6 3.9 1.9 1 1 0 1 1 1 0 Serine incorporator (Serinc) BSMAP PF12280.8 ORF75403 - 0.031 14.5 4.7 0.057 13.6 4.6 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein RR_TM4-6 PF06459.12 ORF75403 - 0.033 14.0 15.8 0.042 13.7 15.8 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Hid1 PF12722.7 ORF75403 - 0.038 12.1 5.7 0.041 12.0 5.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein LAP1C PF05609.12 ORF75403 - 0.067 12.3 8.6 0.08 12.0 8.6 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) TRP PF06011.12 ORF75403 - 0.084 11.6 0.0 0.13 11.0 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel SLC12 PF03522.15 ORF75403 - 0.086 11.8 6.0 0.09 11.8 6.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 DUF913 PF06025.12 ORF75403 - 0.12 11.4 4.2 0.15 11.1 4.2 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) CSG2 PF16965.5 ORF75403 - 0.12 11.3 3.8 0.21 10.5 3.8 1.5 1 1 0 1 1 1 0 Ceramide synthase regulator DUF2207 PF09972.9 ORF75403 - 0.19 10.5 5.4 0.1 11.3 2.3 2.1 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) GWT1 PF06423.12 ORF75403 - 0.19 11.8 3.1 1.1 9.4 3.1 2.0 1 1 0 1 1 1 0 GWT1 DDHD PF02862.17 ORF75403 - 0.21 11.7 1.4 0.25 11.5 1.4 1.3 1 0 0 1 1 1 0 DDHD domain DUF2828 PF11443.8 ORF75403 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) FAM60A PF15396.6 ORF75403 - 0.24 11.4 3.3 0.29 11.1 3.3 1.2 1 0 0 1 1 1 0 Protein Family FAM60A CENP-N PF05238.13 ORF75403 - 0.33 10.2 6.3 0.37 10.1 6.3 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like ALMT PF11744.8 ORF75403 - 0.33 9.7 6.5 0.49 9.2 6.5 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter OppC_N PF12911.7 ORF75403 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C Connexin PF00029.19 ORF75403 - 0.35 10.6 11.0 2.6 7.7 11.0 2.0 1 1 0 1 1 1 0 Connexin DUF2052 PF09747.9 ORF75403 - 0.38 10.9 23.0 0.49 10.5 23.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Peptidase_U57 PF05582.12 ORF75403 - 0.42 9.8 4.7 0.54 9.5 4.7 1.1 1 0 0 1 1 1 0 YabG peptidase U57 Tho2 PF11262.8 ORF75403 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 SAPS PF04499.15 ORF75403 - 0.66 8.7 11.4 0.81 8.4 11.4 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Borrelia_P83 PF05262.11 ORF75403 - 0.73 8.3 14.5 0.74 8.2 14.5 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein PA26 PF04636.13 ORF75403 - 0.83 8.5 6.4 0.96 8.3 6.4 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) V_ATPase_I PF01496.19 ORF75403 - 1.2 7.0 11.0 1.5 6.7 11.0 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CCSAP PF15748.5 ORF75403 - 1.6 8.8 14.3 2 8.5 14.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated SID-1_RNA_chan PF13965.6 ORF75403 - 1.6 7.0 8.4 2.6 6.4 8.4 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 DUF4045 PF13254.6 ORF75403 - 1.7 8.2 13.9 2 7.9 13.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) CLN3 PF02487.17 ORF75403 - 1.8 7.5 6.9 2.8 6.9 6.8 1.5 1 1 0 1 1 1 0 CLN3 protein NPR3 PF03666.13 ORF75403 - 3.3 6.4 11.8 4.2 6.1 11.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 SDA1 PF05285.12 ORF75403 - 3.7 6.9 35.0 4.7 6.5 35.0 1.1 1 0 0 1 1 1 0 SDA1 ECM1 PF05782.11 ORF75403 - 6.7 5.5 14.0 8.1 5.2 14.0 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) Vfa1 PF08432.10 ORF75403 - 9.4 6.5 21.1 13 6.0 21.1 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 PMR5N PF14416.6 ORF72647 - 1.6 9.1 7.4 1.8 8.9 0.8 2.6 2 1 0 2 2 2 0 PMR5 N terminal Domain DUF2400 PF09674.10 ORF71427 - 0.23 11.4 3.7 0.28 11.2 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) eIF_4EBP PF05456.11 ORF71057 - 2.7 7.9 7.7 6.7 6.7 6.2 2.4 2 1 0 2 2 2 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) EMP24_GP25L PF01105.24 ORF69089 - 2.2e-29 102.7 0.1 2.5e-29 102.5 0.1 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD SMI1_KNR4 PF09346.10 ORF6908 - 0.03 14.7 1.7 0.21 12.0 0.4 2.5 2 1 0 2 2 2 0 SMI1 / KNR4 family (SUKH-1) DUF4446 PF14584.6 ORF68391 - 2.7 7.9 4.9 14 5.6 1.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) zf-FLZ PF04570.14 ORF6787 - 0.13 11.7 1.1 0.74 9.3 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of the FCS-type, C2-C2 O_anti_polymase PF01901.16 ORF67019 - 0.017 14.4 0.7 0.017 14.4 0.7 1.8 1 1 0 2 2 2 0 Putative O-antigen polymerase DUF3899 PF13038.6 ORF67019 - 0.18 12.3 4.9 5.5 7.6 0.2 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF3899) VipB PF05943.12 ORF64 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF64 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 Arf PF00025.21 ORF61905 - 7.2e-74 247.0 0.1 8.7e-74 246.7 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 ORF61905 - 1.8e-14 53.6 0.0 2.2e-14 53.4 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF61905 - 2.5e-14 53.5 0.0 3.5e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF61905 - 9.6e-14 51.2 0.0 1.2e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF61905 - 3.8e-12 46.0 0.3 4.8e-08 32.6 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF61905 - 2.5e-09 36.8 0.0 3.1e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF61905 - 3.9e-06 26.9 0.0 5.5e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase MeaB PF03308.16 ORF61905 - 0.0027 16.7 0.1 0.0077 15.2 0.0 1.7 1 1 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 ORF61905 - 0.012 15.2 0.2 0.056 13.0 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain 6PF2K PF01591.18 ORF61905 - 0.11 11.8 0.1 0.16 11.3 0.1 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase DUF2754 PF10953.8 ORF61905 - 0.12 12.6 0.0 0.29 11.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) DUF2012 PF09430.10 ORF61563 - 6.3e-22 78.0 0.1 8.6e-22 77.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2012) Y_Y_Y PF07495.13 ORF61563 - 0.017 15.1 0.1 0.029 14.3 0.1 1.4 1 0 0 1 1 1 0 Y_Y_Y domain CarboxypepD_reg PF13620.6 ORF61563 - 0.018 15.3 0.0 0.028 14.7 0.0 1.3 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain fn3_3 PF14686.6 ORF61563 - 0.11 12.3 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 Polysaccharide lyase family 4, domain II CarbopepD_reg_2 PF13715.6 ORF61563 - 0.13 12.3 0.2 0.18 11.8 0.2 1.4 1 0 0 1 1 1 0 CarboxypepD_reg-like domain SdrD_B PF17210.3 ORF61563 - 0.17 12.1 0.6 0.21 11.8 0.6 1.2 1 0 0 1 1 1 0 SdrD B-like domain DUF2012 PF09430.10 ORF57063 - 5e-22 78.3 0.1 6.9e-22 77.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2012) CarboxypepD_reg PF13620.6 ORF57063 - 0.014 15.6 0.0 0.022 15.0 0.0 1.3 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain Y_Y_Y PF07495.13 ORF57063 - 0.016 15.2 0.1 0.028 14.4 0.1 1.4 1 0 0 1 1 1 0 Y_Y_Y domain fn3_3 PF14686.6 ORF57063 - 0.07 12.9 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Polysaccharide lyase family 4, domain II CarbopepD_reg_2 PF13715.6 ORF57063 - 0.088 12.8 0.3 0.13 12.3 0.3 1.4 1 0 0 1 1 1 0 CarboxypepD_reg-like domain SdrD_B PF17210.3 ORF57063 - 0.14 12.4 0.6 0.18 12.0 0.6 1.2 1 0 0 1 1 1 0 SdrD B-like domain Homeobox_KN PF05920.11 ORF56965 - 2.3e-16 59.4 0.3 4.2e-16 58.6 0.3 1.4 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF56965 - 2.2e-05 24.2 0.3 5.5e-05 22.9 0.3 1.7 1 0 0 1 1 1 1 Homeodomain FliS PF02561.14 ORF56965 - 0.052 13.8 0.0 1.1 9.5 0.0 2.4 2 1 0 2 2 2 0 Flagellar protein FliS RasGEF_N PF00618.20 ORF56965 - 0.086 13.1 2.0 0.1 12.8 0.9 1.8 2 0 0 2 2 2 0 RasGEF N-terminal motif Presenilin PF01080.17 ORF56965 - 7.9 5.1 6.2 8.1 5.1 6.2 1.2 1 0 0 1 1 1 0 Presenilin Laminin_II PF06009.12 ORF55464 - 0.00082 19.4 4.0 0.00082 19.4 4.0 2.9 1 1 2 3 3 3 1 Laminin Domain II Jnk-SapK_ap_N PF09744.9 ORF55464 - 0.0012 19.1 20.7 0.0012 19.1 20.7 2.7 1 1 1 2 2 2 1 JNK_SAPK-associated protein-1 DUF3450 PF11932.8 ORF55464 - 0.0025 17.2 10.5 0.0025 17.2 10.5 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) DUF4200 PF13863.6 ORF55464 - 0.006 17.0 22.5 0.006 17.0 22.5 3.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4200) DUF4472 PF14739.6 ORF55464 - 0.0064 17.2 2.9 0.0064 17.2 2.9 3.1 1 1 2 3 3 3 2 Domain of unknown function (DUF4472) Fez1 PF06818.15 ORF55464 - 0.0068 16.9 20.2 0.0068 16.9 20.2 2.5 1 1 1 2 2 2 1 Fez1 Taxilin PF09728.9 ORF55464 - 0.0069 15.6 40.5 0.029 13.6 40.5 1.8 1 1 0 1 1 1 1 Myosin-like coiled-coil protein DUF1664 PF07889.12 ORF55464 - 0.0081 16.2 3.8 0.0081 16.2 3.8 2.8 1 1 2 3 3 3 2 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.12 ORF55464 - 0.011 15.8 17.6 0.011 15.8 17.6 2.9 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Nup54 PF13874.6 ORF55464 - 0.012 15.7 21.1 0.03 14.4 7.0 2.2 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 THOC7 PF05615.13 ORF55464 - 0.016 15.5 28.9 0.21 11.9 18.0 2.5 1 1 1 2 2 2 0 Tho complex subunit 7 FlaC_arch PF05377.11 ORF55464 - 0.017 15.5 0.5 0.017 15.5 0.5 4.5 1 1 2 3 3 2 0 Flagella accessory protein C (FlaC) APG6_N PF17675.1 ORF55464 - 0.022 15.3 18.0 0.022 15.3 18.0 3.1 1 1 2 3 3 3 0 Apg6 coiled-coil region ADIP PF11559.8 ORF55464 - 0.028 14.5 4.7 0.028 14.5 4.7 3.2 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding Prominin PF05478.11 ORF55464 - 0.064 11.2 27.4 0.08 10.9 27.4 1.0 1 0 0 1 1 1 0 Prominin MAD PF05557.13 ORF55464 - 0.079 11.3 36.6 0.095 11.1 36.6 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein ATG16 PF08614.11 ORF55464 - 0.085 13.1 32.9 0.38 11.0 11.9 2.6 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) PilJ PF13675.6 ORF55464 - 0.15 12.1 8.2 0.47 10.5 0.1 3.0 1 1 2 3 3 3 0 Type IV pili methyl-accepting chemotaxis transducer N-term Spc7 PF08317.11 ORF55464 - 0.17 10.8 36.6 1.5 7.7 28.0 2.5 1 1 1 2 2 2 0 Spc7 kinetochore protein Syntaxin-6_N PF09177.11 ORF55464 - 0.2 12.2 23.4 1.7e+03 -0.4 23.4 3.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal TSC22 PF01166.18 ORF55464 - 0.29 11.5 0.1 0.29 11.5 0.1 4.8 2 2 2 4 4 4 0 TSC-22/dip/bun family IFT57 PF10498.9 ORF55464 - 0.46 9.4 35.0 0.23 10.4 6.6 2.2 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 TMF_TATA_bd PF12325.8 ORF55464 - 0.5 10.6 30.4 0.39 11.0 8.3 3.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Syntaxin PF00804.25 ORF55464 - 0.54 9.9 23.1 0.54 9.9 15.4 2.3 1 1 1 2 2 2 0 Syntaxin Spectrin PF00435.21 ORF55464 - 0.71 10.4 28.1 0.24 11.9 6.8 2.5 1 1 1 2 2 2 0 Spectrin repeat GAS PF13851.6 ORF55464 - 0.96 8.8 42.8 2.4 7.4 24.4 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF948 PF06103.11 ORF55464 - 1.1 9.6 8.4 3.2 8.1 0.2 2.8 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) KASH_CCD PF14662.6 ORF55464 - 1.2 8.9 38.7 0.56 10.0 10.6 2.6 1 1 2 3 3 3 0 Coiled-coil region of CCDC155 or KASH GrpE PF01025.19 ORF55464 - 1.4 8.6 38.4 1 9.0 8.1 4.0 1 1 2 3 3 3 0 GrpE CENP-H PF05837.12 ORF55464 - 1.4 9.3 30.1 0.98 9.9 3.8 3.2 1 1 2 3 3 3 0 Centromere protein H (CENP-H) JAKMIP_CC3 PF16034.5 ORF55464 - 1.5 8.7 32.9 0.7 9.8 9.0 3.8 1 1 3 4 4 4 0 JAKMIP CC3 domain HOOK PF05622.12 ORF55464 - 1.6 6.8 37.4 1 7.4 28.2 2.0 1 1 1 2 2 2 0 HOOK protein DUF2730 PF10805.8 ORF55464 - 2.2 8.4 12.9 3.4 7.8 5.4 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Golgin_A5 PF09787.9 ORF55464 - 2.6 7.4 35.2 2 7.8 24.1 2.0 1 1 1 2 2 2 0 Golgin subfamily A member 5 DUF724 PF05266.14 ORF55464 - 3.2 7.6 31.0 0.76 9.6 10.2 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF724) CREPT PF16566.5 ORF55464 - 3.4 7.8 28.1 0.056 13.6 9.5 2.8 1 1 2 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour HAP1_N PF04849.13 ORF55464 - 4.8 6.3 36.2 30 3.7 36.2 1.9 1 1 0 1 1 1 0 HAP1 N-terminal conserved region HAUS-augmin3 PF14932.6 ORF55464 - 4.8 6.7 33.2 1.3 8.5 17.6 2.1 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 DUF3584 PF12128.8 ORF55464 - 4.8 4.6 32.0 14 3.0 32.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Exonuc_VII_L PF02601.15 ORF55464 - 4.8 6.7 25.5 18 4.7 25.5 1.8 1 1 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_2 PF01920.20 ORF55464 - 6.5 6.8 38.0 1.1 9.3 4.6 4.3 1 1 3 4 4 4 0 Prefoldin subunit DUF4446 PF14584.6 ORF55464 - 6.8 6.7 25.2 0.27 11.2 3.1 3.5 1 1 3 4 4 4 0 Protein of unknown function (DUF4446) Tropomyosin_1 PF12718.7 ORF55464 - 6.8 6.8 39.3 6.5 6.9 28.1 2.7 1 1 1 2 2 2 0 Tropomyosin like Sec34 PF04136.15 ORF55464 - 8.3 6.3 30.1 0.15 11.9 6.4 3.6 1 1 4 5 5 5 0 Sec34-like family Tup_N PF08581.10 ORF55464 - 9.4 6.6 33.8 0.27 11.6 6.5 4.4 1 1 3 4 4 4 0 Tup N-terminal CENP-F_leu_zip PF10473.9 ORF55464 - 9.9 6.2 38.6 1.6 8.8 20.3 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 MoCF_biosynth PF00994.24 ORF54698 - 5.2e-28 97.5 0.0 6.4e-28 97.2 0.0 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain 7TM_GPCR_Srab PF10292.9 ORF53458 - 0.31 9.9 2.9 0.54 9.1 2.7 1.5 1 1 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor Rhabdo_M2 PF04785.12 ORF52820 - 0.17 11.2 0.0 0.26 10.6 0.0 1.3 1 0 0 1 1 1 0 Rhabdovirus matrix protein M2 Abhydrolase_1 PF00561.20 ORF52668 - 0.033 13.8 0.0 0.051 13.2 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Ank_2 PF12796.7 ORF48851 - 1.4e-25 89.6 0.4 1e-11 45.3 0.0 2.8 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF48851 - 1.9e-23 81.8 4.8 4.4e-09 36.4 0.1 4.1 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF48851 - 3.8e-23 81.2 1.5 2.5e-08 34.0 0.0 3.3 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF48851 - 7.5e-23 80.6 6.0 3.2e-08 33.9 0.1 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF48851 - 1.5e-20 71.1 2.5 7.5e-07 29.0 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat ENT PF03735.14 ORF48851 - 0.0084 16.2 0.0 0.032 14.3 0.0 1.8 2 0 0 2 2 2 1 ENT domain SWIM PF04434.17 ORF47572 - 1.3 8.8 4.3 2.4 7.9 4.3 1.4 1 0 0 1 1 1 0 SWIM zinc finger PBP1_TM PF14812.6 ORF46691 - 0.0017 18.7 0.0 0.003 17.9 0.0 1.4 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Saf_2TM PF18303.1 ORF46691 - 0.071 12.7 1.1 0.46 10.1 0.0 2.1 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain DUF2207 PF09972.9 ORF46691 - 0.077 11.7 0.1 0.12 11.1 0.1 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2663 PF10864.8 ORF46691 - 0.11 12.9 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF4064 PF13273.6 ORF46691 - 0.64 10.3 4.1 1.5 9.2 4.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) Mur_ligase_C PF02875.21 ORF45913 - 2.7e-27 94.8 0.0 2.4e-26 91.8 0.0 2.1 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain RuvA_C PF07499.13 ORF45913 - 0.11 13.0 0.9 0.28 11.7 0.9 1.8 1 1 0 1 1 1 0 RuvA, C-terminal domain Ins_beta PF03488.14 ORF45462 - 4.2 7.5 8.0 6.1 6.9 0.5 2.9 3 0 0 3 3 3 0 Nematode insulin-related peptide beta type S_layer_N PF05123.12 ORF44729 - 0.0018 18.2 0.4 0.0023 17.9 0.4 1.1 1 0 0 1 1 1 1 S-layer like family, N-terminal region Peptidase_M24 PF00557.24 ORF38924 - 0.00016 21.5 0.0 0.00019 21.2 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 PMR5N PF14416.6 ORF36655 - 1.6 9.1 7.4 1.8 8.9 0.8 2.6 2 1 0 2 2 2 0 PMR5 N terminal Domain S_layer_N PF05123.12 ORF35789 - 0.0018 18.2 0.4 0.0023 17.9 0.4 1.1 1 0 0 1 1 1 1 S-layer like family, N-terminal region 7TM_GPCR_Srab PF10292.9 ORF3314 - 0.31 9.9 2.9 0.54 9.1 2.7 1.5 1 1 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor Plasmodium_Vir PF05795.11 ORF32163 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF32163 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF32163 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF32163 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF32163 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF32163 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF32163 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF32163 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF32163 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF32163 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF32163 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF32163 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF32163 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF32163 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF32163 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF32163 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF32163 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF32163 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF32163 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF32163 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF32163 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF32163 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF32163 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF32163 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF32163 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF32163 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF32163 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF32163 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF32163 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF32163 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF32163 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF32163 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF32163 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 CNDH2_C PF16858.5 ORF31889 - 0.37 10.6 3.9 0.57 10.0 3.9 1.4 1 1 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term LTV PF04180.14 ORF31889 - 4.6 6.9 8.0 2.1 8.0 4.2 1.8 2 0 0 2 2 2 0 Low temperature viability protein DUF5539 PF17693.1 ORF31764 - 4.9 6.7 11.6 2.9 7.5 6.8 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5539) Crisp PF08562.10 ORF31503 - 9.9 6.8 8.1 2 9.1 0.3 3.1 3 0 0 3 3 3 0 Crisp MscS_TM PF12794.7 ORF31398 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 Plasmodium_Vir PF05795.11 ORF31398 - 0.0026 17.3 2.7 0.0033 16.9 2.7 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein SID-1_RNA_chan PF13965.6 ORF31398 - 0.0041 15.6 0.4 0.0063 15.0 0.4 1.2 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 DUF4064 PF13273.6 ORF31398 - 0.01 16.1 0.0 0.26 11.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) DUF2207 PF09972.9 ORF31398 - 0.015 14.1 0.3 0.015 14.1 0.3 2.1 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) BSMAP PF12280.8 ORF31398 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF31398 - 0.039 13.1 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF31398 - 0.045 12.7 5.2 0.46 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) TRP PF06011.12 ORF31398 - 0.053 12.2 0.0 0.078 11.7 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel Hid1 PF12722.7 ORF31398 - 0.056 11.6 7.0 0.061 11.5 7.0 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF31398 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 GWT1 PF06423.12 ORF31398 - 0.077 13.1 2.2 0.45 10.6 2.2 2.0 1 1 0 1 1 1 0 GWT1 CDC45 PF02724.14 ORF31398 - 0.077 11.3 16.4 0.085 11.1 16.4 1.1 1 0 0 1 1 1 0 CDC45-like protein CSG2 PF16965.5 ORF31398 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator OppC_N PF12911.7 ORF31398 - 0.12 12.3 4.1 2 8.5 2.2 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C SLC12 PF03522.15 ORF31398 - 0.16 11.0 7.4 0.17 10.9 7.4 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF31398 - 0.17 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF31398 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) FAM60A PF15396.6 ORF31398 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF31398 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Borrelia_P83 PF05262.11 ORF31398 - 0.49 8.8 15.7 0.54 8.7 15.7 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein ALMT PF11744.8 ORF31398 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter CENP-N PF05238.13 ORF31398 - 0.72 9.1 8.3 0.9 8.8 8.3 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like V_ATPase_I PF01496.19 ORF31398 - 0.81 7.5 10.8 1 7.2 10.8 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family SAPS PF04499.15 ORF31398 - 0.83 8.4 11.7 1 8.1 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein PA26 PF04636.13 ORF31398 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) CLN3 PF02487.17 ORF31398 - 1.7 7.6 7.0 2.7 6.9 7.0 1.5 1 1 0 1 1 1 0 CLN3 protein Nop14 PF04147.12 ORF31398 - 1.9 6.6 30.6 2.3 6.3 30.6 1.0 1 0 0 1 1 1 0 Nop14-like family DUF4045 PF13254.6 ORF31398 - 3.5 7.2 15.1 4.2 6.9 15.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) CCSAP PF15748.5 ORF31398 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF31398 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF31398 - 4.5 5.9 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Vma12 PF11712.8 ORF31398 - 6.5 6.8 5.8 0.61 10.1 0.9 1.8 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase SDA1 PF05285.12 ORF31398 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 DUF2370 PF10176.9 ORF31398 - 8.2 6.0 6.6 51 3.4 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) CSD PF00313.22 ORF30833 - 0.00048 19.9 1.3 0.0011 18.8 1.3 1.6 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF30833 - 0.00079 19.1 0.1 0.0015 18.1 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain CSD2 PF17876.1 ORF30833 - 0.039 14.1 0.0 0.079 13.1 0.0 1.5 1 0 0 1 1 1 0 Cold shock domain SH3BP5 PF05276.14 ORF30833 - 0.56 10.0 3.6 2.8 7.7 3.6 1.8 1 1 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) BAH PF01426.18 ORF2967 - 8e-10 38.6 0.0 1.2e-09 38.1 0.0 1.2 1 0 0 1 1 1 1 BAH domain PHD PF00628.29 ORF2967 - 7.8e-09 35.3 6.2 1.7e-08 34.2 6.2 1.6 1 0 0 1 1 1 1 PHD-finger zf-CW PF07496.15 ORF2967 - 0.026 14.6 1.6 0.08 13.0 1.6 1.8 1 0 0 1 1 1 0 CW-type Zinc Finger PHD_2 PF13831.6 ORF2967 - 0.049 13.2 1.1 0.11 12.1 1.1 1.6 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 ORF2967 - 0.078 12.9 4.3 0.1 12.6 1.2 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 C1_1 PF00130.22 ORF2967 - 0.83 9.6 7.6 0.13 12.2 2.2 2.3 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Pkinase PF00069.25 ORF27868 - 3.8e-31 108.4 0.0 5.8e-31 107.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF27868 - 9.3e-15 54.6 0.0 1.3e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF27868 - 0.0011 18.3 0.0 0.0018 17.7 0.0 1.4 1 0 0 1 1 1 1 Kinase-like zf-RING_2 PF13639.6 ORF26517 - 2.1e-13 50.4 7.6 2.1e-13 50.4 7.6 2.0 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF26517 - 2.2e-09 36.9 4.0 2.2e-09 36.9 4.0 2.7 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF26517 - 4.7e-08 32.7 6.8 1.4e-07 31.2 6.8 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF26517 - 7.5e-07 29.3 11.3 4.4e-06 26.9 11.3 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF26517 - 2e-06 27.5 7.2 6.1e-06 26.0 7.2 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF26517 - 1.8e-05 24.6 7.5 4.6e-05 23.3 7.5 1.8 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF26517 - 1.9e-05 24.6 5.1 1.9e-05 24.6 5.1 2.4 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF26517 - 0.00025 20.8 5.5 0.00025 20.8 5.5 1.9 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF26517 - 0.0029 17.7 5.7 0.013 15.6 5.7 2.1 1 1 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF26517 - 0.0084 15.7 7.1 0.031 13.9 6.9 2.1 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF26517 - 0.0085 15.9 5.7 0.0085 15.9 5.7 1.9 2 0 0 2 2 1 1 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF26517 - 0.0098 16.0 7.4 0.0098 16.0 7.4 1.9 2 0 0 2 2 2 1 RING-variant domain zf-ANAPC11 PF12861.7 ORF26517 - 0.012 15.7 6.4 0.038 14.0 6.4 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger GMP_PDE_delta PF05351.11 ORF26517 - 0.089 12.9 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 GMP-PDE, delta subunit WCOR413 PF05562.11 ORF26517 - 0.13 12.2 1.4 0.26 11.2 1.4 1.5 1 1 0 1 1 1 0 Cold acclimation protein WCOR413 Prok-RING_1 PF14446.6 ORF26517 - 3.8 7.5 6.9 6.7 6.7 2.9 2.9 2 1 1 3 3 3 0 Prokaryotic RING finger family 1 EMP24_GP25L PF01105.24 ORF26194 - 2.2e-29 102.7 0.1 2.5e-29 102.5 0.1 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD FlbT PF07378.11 ORF25354 - 0.045 13.8 0.1 0.087 12.9 0.1 1.7 1 1 0 1 1 1 0 Flagellar protein FlbT FumaraseC_C PF10415.9 ORF24996 - 0.0065 16.9 1.1 3.4 8.2 0.1 3.1 3 0 0 3 3 3 2 Fumarase C C-terminus YrzK PF17449.2 ORF24996 - 0.073 13.4 1.6 83 3.6 0.0 3.5 3 0 0 3 3 3 0 Uncharacterized YrzK-like DUF3235 PF11574.8 ORF24996 - 0.088 13.7 0.0 1.1 10.2 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3235) OrfB_Zn_ribbon PF07282.11 ORF24996 - 0.13 12.2 2.0 8.8 6.3 0.1 3.3 3 1 0 3 3 3 0 Putative transposase DNA-binding domain PhageMin_Tail PF10145.9 ORF24996 - 0.2 11.5 5.3 2 8.2 2.3 2.3 1 1 1 2 2 2 0 Phage-related minor tail protein VipB PF05943.12 ORF24882 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF24882 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 VipB PF05943.12 ORF21382 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF21382 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 Nexin_C PF08628.12 ORF19975 - 0.13 12.8 0.0 0.24 12.0 0.0 1.4 1 0 0 1 1 1 0 Sorting nexin C terminal VipB PF05943.12 ORF16338 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF16338 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 GSG-1 PF07803.11 ORF151830 - 0.062 13.2 0.2 1.3 9.0 0.1 2.3 2 1 0 2 2 2 0 GSG1-like protein PPR_2 PF13041.6 ORF150840 - 0.16 12.2 0.0 2.7 8.2 0.0 2.4 2 1 1 3 3 3 0 PPR repeat family Plasmodium_Vir PF05795.11 ORF150644 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF150644 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF150644 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF150644 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF150644 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF150644 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF150644 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF150644 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF150644 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF150644 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF150644 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF150644 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF150644 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF150644 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF150644 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF150644 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF150644 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF150644 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF150644 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF150644 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF150644 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF150644 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF150644 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF150644 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF150644 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF150644 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF150644 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF150644 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF150644 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF150644 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF150644 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF150644 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF150644 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 DUF2465 PF10239.9 ORF150204 - 0.089 12.0 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2465) MyTH4 PF00784.17 ORF143841 - 0.055 14.0 0.2 3.1 8.4 0.0 2.2 2 0 0 2 2 2 0 MyTH4 domain Endothelin PF00322.17 ORF13808 - 0.053 13.1 3.4 0.16 11.6 3.4 1.8 1 0 0 1 1 1 0 Endothelin family adh_short_C2 PF13561.6 ORF137114 - 2.2e-41 142.0 0.0 3.5e-41 141.3 0.0 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF137114 - 5.1e-32 110.9 0.0 6.3e-32 110.6 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF137114 - 0.11 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 KR domain KxDL PF10241.9 ORF132927 - 0.012 15.9 4.8 0.15 12.3 0.0 2.9 3 0 0 3 3 3 0 Uncharacterized conserved protein HPPK PF01288.20 ORF132927 - 0.034 14.7 1.2 0.19 12.3 0.0 2.4 1 1 2 3 3 3 0 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Plasmodium_Vir PF05795.11 ORF129977 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF129977 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF129977 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF129977 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF129977 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF129977 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF129977 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF129977 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF129977 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF129977 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF129977 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF129977 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF129977 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF129977 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF129977 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF129977 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF129977 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF129977 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF129977 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF129977 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF129977 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF129977 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF129977 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF129977 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF129977 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF129977 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF129977 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF129977 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF129977 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF129977 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF129977 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF129977 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF129977 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 PID_2 PF14719.6 ORF128501 - 0.014 15.3 0.0 0.026 14.4 0.0 1.5 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) adh_short_C2 PF13561.6 ORF12744 - 2.2e-41 142.0 0.0 3.5e-41 141.3 0.0 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF12744 - 5.1e-32 110.9 0.0 6.3e-32 110.6 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF12744 - 0.11 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 KR domain MtrD PF04207.12 ORF122056 - 0.47 10.1 7.4 1.2 8.7 0.3 2.6 2 1 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit D TRP PF06011.12 ORF122056 - 0.77 8.4 16.5 1.3 7.7 16.5 1.5 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel PRT_C PF08372.10 ORF122056 - 1.8 8.3 8.6 1.7 8.4 0.3 2.8 2 1 0 3 3 3 0 Plant phosphoribosyltransferase C-terminal 7TM_GPCR_Srab PF10292.9 ORF121905 - 0.31 9.9 2.9 0.54 9.1 2.7 1.5 1 1 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor Plasmodium_Vir PF05795.11 ORF121478 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF121478 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF121478 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF121478 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF121478 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF121478 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF121478 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF121478 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF121478 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF121478 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF121478 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF121478 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF121478 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF121478 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF121478 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF121478 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF121478 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF121478 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF121478 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF121478 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF121478 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF121478 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF121478 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF121478 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF121478 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF121478 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF121478 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF121478 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF121478 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF121478 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF121478 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF121478 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF121478 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 Mod_r PF07200.13 ORF120536 - 0.0089 16.1 3.5 0.0089 16.1 3.5 1.7 1 1 1 2 2 2 1 Modifier of rudimentary (Mod(r)) protein DUF3109 PF11307.8 ORF118847 - 0.11 12.2 3.0 0.17 11.7 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3109) Ig_2 PF13895.6 ORF115858 - 0.059 13.7 0.0 0.09 13.1 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin domain IBR PF01485.21 ORF115678 - 1.4e-05 25.2 10.1 1.4e-05 25.2 10.1 3.3 2 1 1 3 3 3 1 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF115678 - 0.00033 20.9 11.5 0.00033 20.9 11.5 2.3 2 0 0 2 2 2 2 Ring finger domain HoxA13_N PF12284.8 ORF115678 - 0.38 11.4 3.0 0.73 10.5 0.2 2.2 1 1 1 2 2 2 0 Hox protein A13 N terminal zf-ACC PF17848.1 ORF115678 - 1 9.5 13.9 6.2 7.0 4.7 3.6 3 1 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain DZR PF12773.7 ORF115678 - 9.5 6.3 34.8 1.9 8.6 3.2 4.2 2 2 3 5 5 5 0 Double zinc ribbon EMP24_GP25L PF01105.24 ORF11538 - 2.2e-29 102.7 0.1 2.5e-29 102.5 0.1 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD VipB PF05943.12 ORF115047 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF115047 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 TFIIA PF03153.13 ORF114938 - 2.9 7.8 7.0 3.5 7.5 7.0 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit GspL_C PF12693.7 ORF114212 - 0.045 13.6 0.0 0.062 13.1 0.0 1.1 1 0 0 1 1 1 0 GspL periplasmic domain Plasmodium_Vir PF05795.11 ORF113082 - 0.0015 18.0 2.6 0.002 17.6 2.6 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF113082 - 0.0023 16.8 5.3 0.0023 16.8 5.3 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF113082 - 0.0099 16.1 0.0 0.25 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) BSMAP PF12280.8 ORF113082 - 0.035 14.3 4.9 0.069 13.4 4.9 1.5 1 1 0 1 1 1 0 Brain specific membrane anchored protein LAP1C PF05609.12 ORF113082 - 0.039 13.0 8.3 0.047 12.8 8.3 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Serinc PF03348.15 ORF113082 - 0.044 12.7 5.1 0.45 9.4 5.2 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) Hid1 PF12722.7 ORF113082 - 0.046 11.9 6.7 0.051 11.7 6.7 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein RR_TM4-6 PF06459.12 ORF113082 - 0.072 12.9 17.0 0.096 12.5 17.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TRP PF06011.12 ORF113082 - 0.076 11.7 0.0 0.11 11.2 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel CSG2 PF16965.5 ORF113082 - 0.09 11.7 3.7 0.18 10.7 3.7 1.6 1 1 0 1 1 1 0 Ceramide synthase regulator CDC45 PF02724.14 ORF113082 - 0.092 11.0 16.7 0.1 10.9 16.7 1.1 1 0 0 1 1 1 0 CDC45-like protein GWT1 PF06423.12 ORF113082 - 0.11 12.6 2.4 0.66 10.1 2.4 2.0 1 1 0 1 1 1 0 GWT1 SLC12 PF03522.15 ORF113082 - 0.12 11.4 7.0 0.13 11.3 7.0 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Connexin PF00029.19 ORF113082 - 0.18 11.6 10.5 1.8 8.3 10.5 2.0 1 1 0 1 1 1 0 Connexin DUF2828 PF11443.8 ORF113082 - 0.22 9.6 6.5 0.28 9.2 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) OppC_N PF12911.7 ORF113082 - 0.34 10.9 5.5 4.9 7.2 3.5 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C CENP-N PF05238.13 ORF113082 - 0.46 9.7 7.7 0.58 9.4 7.7 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like FAM60A PF15396.6 ORF113082 - 0.46 10.5 4.5 0.54 10.2 4.5 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Tho2 PF11262.8 ORF113082 - 0.47 9.6 7.6 0.64 9.2 7.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ALMT PF11744.8 ORF113082 - 0.49 9.2 7.1 0.74 8.6 7.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF113082 - 0.65 8.4 16.0 0.7 8.3 16.0 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SAPS PF04499.15 ORF113082 - 0.77 8.5 11.7 0.94 8.2 11.7 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF2207 PF09972.9 ORF113082 - 0.81 8.4 7.5 0.077 11.7 1.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) V_ATPase_I PF01496.19 ORF113082 - 0.96 7.3 11.1 1.2 7.0 11.1 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PA26 PF04636.13 ORF113082 - 1.1 8.2 7.0 1.2 7.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) SID-1_RNA_chan PF13965.6 ORF113082 - 1.9 6.8 8.7 3.3 6.0 8.7 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF113082 - 2 7.4 7.3 3.1 6.7 7.3 1.5 1 1 0 1 1 1 0 CLN3 protein CCSAP PF15748.5 ORF113082 - 4.1 7.5 16.3 5 7.2 16.3 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated ECM1 PF05782.11 ORF113082 - 4.3 6.2 14.7 5.1 5.9 14.7 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) NPR3 PF03666.13 ORF113082 - 4.5 6.0 12.3 5.3 5.7 12.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4045 PF13254.6 ORF113082 - 5.7 6.5 15.8 6.8 6.2 15.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) DUF2370 PF10176.9 ORF113082 - 7.8 6.1 6.6 46 3.5 6.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) SDA1 PF05285.12 ORF113082 - 8 5.8 36.9 10 5.4 36.9 1.1 1 0 0 1 1 1 0 SDA1 Homeobox_KN PF05920.11 ORF112260 - 2.3e-16 59.4 0.3 4.2e-16 58.6 0.3 1.4 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF112260 - 2.2e-05 24.2 0.3 5.5e-05 22.9 0.3 1.7 1 0 0 1 1 1 1 Homeodomain FliS PF02561.14 ORF112260 - 0.052 13.8 0.0 1.1 9.5 0.0 2.4 2 1 0 2 2 2 0 Flagellar protein FliS RasGEF_N PF00618.20 ORF112260 - 0.086 13.1 2.0 0.1 12.8 0.9 1.8 2 0 0 2 2 2 0 RasGEF N-terminal motif Presenilin PF01080.17 ORF112260 - 7.9 5.1 6.2 8.1 5.1 6.2 1.2 1 0 0 1 1 1 0 Presenilin 7TM_GPCR_Srab PF10292.9 ORF107416 - 0.31 9.9 2.9 0.54 9.1 2.7 1.5 1 1 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor VipB PF05943.12 ORF105185 - 0.081 11.7 0.1 0.17 10.6 0.0 1.5 2 0 0 2 2 2 0 Type VI secretion protein, EvpB/VC_A0108, tail sheath Dynactin_p22 PF07426.11 ORF105185 - 0.11 12.4 0.3 0.24 11.2 0.3 1.6 1 1 0 1 1 1 0 Dynactin subunit p22 Pkinase PF00069.25 ORF104826 - 1.2e-23 83.8 0.0 1.5e-23 83.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF104826 - 5.7e-22 78.2 0.0 6.9e-22 78.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF104826 - 0.0018 17.2 0.0 0.0021 16.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF104826 - 0.0042 16.5 0.1 0.0063 15.9 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF104826 - 0.0048 16.2 0.0 0.0063 15.9 0.0 1.3 1 0 0 1 1 1 1 Kinase-like EcKinase PF02958.20 ORF104826 - 0.059 12.7 0.0 0.083 12.2 0.0 1.1 1 0 0 1 1 1 0 Ecdysteroid kinase ETS_PEA3_N PF04621.13 ORF104483 - 0.37 10.6 7.2 0.45 10.3 7.2 1.1 1 0 0 1 1 1 0 PEA3 subfamily ETS-domain transcription factor N terminal domain Ribonuc_red_lgC PF02867.15 ORF103928 - 2.7e-08 32.8 0.1 3.4e-08 32.5 0.1 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Yae1_N PF09811.9 ORF103928 - 0.14 11.9 0.0 29 4.5 0.0 2.7 3 0 0 3 3 3 0 Essential protein Yae1, N terminal PMR5N PF14416.6 ORF102784 - 1.6 9.1 7.4 1.8 8.9 0.8 2.6 2 1 0 2 2 2 0 PMR5 N terminal Domain N_methyl PF07963.12 ORF102561 - 2.1e-09 36.5 1.0 3.5e-09 35.8 1.0 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif T2SSJ PF11612.8 ORF102561 - 2.1e-07 31.3 0.7 2.1e-06 28.0 0.7 2.2 1 1 0 1 1 1 1 Type II secretion system (T2SS), protein J DUF4525 PF15027.6 ORF102561 - 0.02 14.6 0.0 0.032 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) Col_cuticle_N PF01484.17 ORF102561 - 0.041 13.9 0.6 0.069 13.2 0.6 1.4 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain DnaJ_C PF01556.18 ORF101825 - 8e-25 87.7 0.0 1e-24 87.3 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.19 ORF101825 - 0.0014 19.0 1.8 0.0025 18.1 1.8 1.4 1 0 0 1 1 1 1 DnaJ central domain Rhomboid PF01694.22 ORF100493 - 8.4e-24 84.3 10.0 8.4e-24 84.3 10.0 1.5 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.10 ORF100493 - 0.019 15.5 0.7 0.063 13.9 0.0 2.2 3 0 0 3 3 3 0 Eukaryotic integral membrane protein (DUF1751) 7TM-7TMR_HD PF07698.11 ORF100493 - 4.6 6.9 8.0 1.1 9.0 4.2 1.9 2 1 0 2 2 2 0 7TM receptor with intracellular HD hydrolase Myb_DNA-binding PF00249.31 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 4.8e-18 65.1 5.8 3.7e-16 59.0 2.0 2.3 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 1.1e-15 57.7 0.9 1.9e-15 56.9 0.9 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Rap1_C PF11626.8 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 0.00034 20.6 1.0 0.00096 19.2 0.1 1.9 1 1 1 2 2 2 1 TRF2-interacting telomeric protein/Rap1 - C terminal domain SLIDE PF09111.10 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 0.0064 16.5 0.0 0.015 15.3 0.0 1.6 1 0 0 1 1 1 1 SLIDE Exo70 PF03081.15 NODE_36893_length_580_cov_2.326606_g29698_i0reverse_frame_1 - 0.076 12.1 0.1 0.11 11.5 0.1 1.2 1 0 0 1 1 1 0 Exo70 exocyst complex subunit RRN3 PF05327.11 NODE_36884_length_580_cov_3.847706_g29689_i0forward_frame_1 - 0.13 10.8 5.2 0.14 10.7 5.2 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Vfa1 PF08432.10 NODE_36884_length_580_cov_3.847706_g29689_i0forward_frame_1 - 0.79 10.0 11.8 1.2 9.4 11.8 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Herpeto_peptide PF14409.6 NODE_36860_length_580_cov_236.414679_g27302_i2reverse_frame_1 - 1 9.7 30.2 0.66 10.2 0.5 4.3 1 1 3 4 4 4 0 Ribosomally synthesized peptide in Herpetosiphon FNIP PF05725.12 NODE_36860_length_580_cov_236.414679_g27302_i2forward_frame_1 - 2.1e-21 75.8 11.2 9.9e-13 48.0 3.0 2.3 2 0 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_36860_length_580_cov_236.414679_g27302_i2forward_frame_1 - 3.6e-05 23.7 0.5 8.7e-05 22.5 0.5 1.6 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) DUF4506 PF14958.6 NODE_36851_length_580_cov_462.291743_g23750_i2reverse_frame_1 - 0.004 16.7 0.9 0.0086 15.6 0.9 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4506) ABC_tran PF00005.27 NODE_36814_length_581_cov_162.677656_g29625_i0reverse_frame_1 - 2e-05 25.1 0.0 3.5e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter GvpH PF05455.11 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.001 19.2 15.9 35 4.4 0.1 7.8 1 1 8 9 9 9 0 GvpH A1_Propeptide PF07966.12 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.0011 18.8 0.0 5.1e+02 0.7 0.0 6.8 8 0 0 8 8 8 0 A1 Propeptide RTTN_N PF14726.6 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.0052 17.6 6.6 1.7 9.5 0.7 3.2 1 1 2 3 3 3 2 Rotatin, an armadillo repeat protein, centriole functioning DUF2785 PF10978.8 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.02 14.6 7.7 0.68 9.7 1.5 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2785) KH_4 PF13083.6 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.08 12.8 24.0 7.2 6.6 0.1 7.7 8 0 0 8 8 8 0 KH domain SbsC_C PF18058.1 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_1 - 0.12 12.6 7.5 22 5.3 0.2 3.7 1 1 3 4 4 4 0 SbsC C-terminal domain Cas_CXXC_CXXC PF09706.10 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_1 - 1e-05 25.6 11.7 32 4.8 0.0 7.5 1 1 7 8 8 8 6 CRISPR-associated protein (Cas_CXXC_CXXC) zf-MYND PF01753.18 NODE_36776_length_582_cov_50.274223_g29594_i0reverse_frame_1 - 4.7e-13 49.0 12.0 4.7e-13 49.0 12.0 1.7 2 0 0 2 2 2 1 MYND finger zf-C6H2 PF15801.5 NODE_36776_length_582_cov_50.274223_g29594_i0reverse_frame_1 - 2.7 8.4 13.7 0.25 11.7 8.2 2.1 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding DUF4441 PF14536.6 NODE_36749_length_582_cov_221.550274_g29569_i0forward_frame_1 - 0.063 13.5 5.9 0.1 12.8 5.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) HATPase_c PF02518.26 NODE_36749_length_582_cov_221.550274_g29569_i0forward_frame_1 - 0.068 13.7 0.0 0.11 13.0 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1304 PF06993.12 NODE_36728_length_583_cov_2.458029_g29553_i0forward_frame_2 - 0.018 15.1 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1304) FANCI_S2 PF14676.6 NODE_36726_length_583_cov_2.687956_g29551_i0reverse_frame_2 - 0.023 15.0 0.1 0.032 14.5 0.1 1.2 1 0 0 1 1 1 0 FANCI solenoid 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks121.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks121.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks121.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks121.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:01:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1948 PF09185.10 NODE_36722_length_583_cov_2.779197_g29547_i0forward_frame_2 - 0.024 14.5 0.5 0.039 13.8 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1948) FlaC_arch PF05377.11 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 0.00092 19.6 2.9 0.0048 17.2 0.2 2.7 2 0 0 2 2 2 1 Flagella accessory protein C (FlaC) bZIP_1 PF00170.21 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 0.1 12.7 0.9 0.1 12.7 0.9 2.9 2 1 1 3 3 3 0 bZIP transcription factor Snapin_Pallidin PF14712.6 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 0.15 12.5 4.9 0.76 10.2 0.3 2.7 2 1 0 2 2 2 0 Snapin/Pallidin DUF4140 PF13600.6 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 0.63 10.5 3.6 2.4 8.6 1.8 2.4 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) V_ATPase_I PF01496.19 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 1.1 7.1 9.2 1.2 7.0 9.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 2.6 8.1 5.3 3.4 7.7 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) CLZ PF16526.5 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 3.5 8.1 8.5 1.1 9.6 0.2 3.2 3 2 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF724 PF05266.14 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 7.2 6.4 16.7 0.23 11.2 4.2 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Spc24 PF08286.11 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 7.4 6.9 12.1 2.3 8.5 2.9 3.0 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 XhlA PF10779.9 NODE_36720_length_583_cov_2.830292_g29545_i0reverse_frame_3 - 7.5 6.8 14.2 0.16 12.2 1.5 2.9 3 0 0 3 3 3 0 Haemolysin XhlA Rrn6 PF10214.9 NODE_36712_length_583_cov_89.012774_g29537_i0forward_frame_3 - 1.7 7.1 15.2 2 6.8 15.2 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor ASFV_J13L PF05568.11 NODE_36712_length_583_cov_89.012774_g29537_i0forward_frame_2 - 3.6 7.3 7.6 4.9 6.9 7.6 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Na_H_antiporter PF03553.14 NODE_36710_length_583_cov_106.651460_g29535_i0reverse_frame_2 - 0.19 11.0 0.6 0.24 10.6 0.6 1.1 1 0 0 1 1 1 0 Na+/H+ antiporter family NPV_P10 PF05531.12 NODE_36703_length_583_cov_178.186131_g29529_i0reverse_frame_3 - 0.081 13.4 1.3 0.23 11.9 1.1 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Cid2 PF09774.9 NODE_36703_length_583_cov_178.186131_g29529_i0reverse_frame_3 - 0.32 11.4 6.2 0.13 12.7 3.5 1.7 1 1 0 1 1 1 0 Caffeine-induced death protein 2 DUF1604 PF07713.13 NODE_36703_length_583_cov_178.186131_g29529_i0reverse_frame_3 - 0.52 10.2 2.6 1.3 8.9 2.6 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) ACR_tran PF00873.19 NODE_36703_length_583_cov_178.186131_g29529_i0reverse_frame_3 - 0.59 7.7 4.4 0.72 7.4 4.4 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family HlyIII PF03006.20 NODE_36687_length_584_cov_2.377049_g29517_i0reverse_frame_3 - 0.077 12.7 6.3 0.096 12.4 6.3 1.1 1 0 0 1 1 1 0 Haemolysin-III related YWFCY PF14293.6 NODE_36685_length_584_cov_2.664845_g29515_i0reverse_frame_2 - 0.047 14.0 4.3 0.047 14.0 4.3 2.0 2 0 0 2 2 2 0 YWFCY protein AA_kinase PF00696.28 NODE_36683_length_584_cov_2.941712_g29513_i0reverse_frame_2 - 0.00011 21.9 0.0 0.00014 21.5 0.0 1.2 1 0 0 1 1 1 1 Amino acid kinase family Pheromone PF08015.11 NODE_36683_length_584_cov_2.941712_g29513_i0forward_frame_3 - 0.08 14.0 5.7 4.1 8.5 0.5 2.7 2 1 1 3 3 3 0 Fungal mating-type pheromone DUF4064 PF13273.6 NODE_36681_length_584_cov_3.040073_g29511_i0reverse_frame_2 - 0.026 14.8 1.7 0.063 13.6 1.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) OAD_gamma PF04277.13 NODE_36681_length_584_cov_3.040073_g29511_i0reverse_frame_2 - 0.056 14.0 0.2 0.099 13.3 0.2 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain SecE PF00584.20 NODE_36681_length_584_cov_3.040073_g29511_i0reverse_frame_2 - 0.17 11.8 3.6 0.35 10.8 3.6 1.4 1 0 0 1 1 1 0 SecE/Sec61-gamma subunits of protein translocation complex RRM_1 PF00076.22 NODE_36677_length_584_cov_3.462659_g29507_i0forward_frame_3 - 2.6e-06 27.1 0.0 4.8e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RL PF17797.1 NODE_36677_length_584_cov_3.462659_g29507_i0forward_frame_3 - 0.14 12.1 0.9 0.37 10.8 0.1 2.1 2 0 0 2 2 2 0 RL domain RSN1_TM PF13967.6 NODE_36677_length_584_cov_3.462659_g29507_i0forward_frame_3 - 0.29 10.9 4.5 1.1 8.9 2.1 2.0 1 1 1 2 2 2 0 Late exocytosis, associated with Golgi transport BPL_N PF09825.9 NODE_36676_length_584_cov_3.819672_g29506_i0forward_frame_2 - 0.57 9.2 4.5 15 4.6 3.2 2.0 2 0 0 2 2 2 0 Biotin-protein ligase, N terminal MT PF12777.7 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 3.3e-17 62.5 6.0 4e-17 62.3 6.0 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor BORCS7 PF16088.5 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.01 16.1 1.7 0.028 14.7 1.6 1.8 1 1 1 2 2 2 0 BLOC-1-related complex sub-unit 7 DUF2564 PF10819.8 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.011 16.2 2.8 0.03 14.7 2.8 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2564) Spc7 PF08317.11 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.14 11.0 13.7 0.21 10.4 13.7 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein TPR_2 PF07719.17 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.28 11.4 3.6 8.1 6.8 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat FliD_N PF02465.18 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.52 11.0 6.6 0.34 11.6 3.7 2.1 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus FlgM PF04316.13 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 0.76 10.2 0.1 0.76 10.2 0.1 2.7 3 0 0 3 3 3 0 Anti-sigma-28 factor, FlgM TSNAXIP1_N PF15739.5 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 1.2 9.5 11.2 0.37 11.2 6.9 2.1 2 0 0 2 2 2 0 Translin-associated factor X-interacting N-terminus DUF2229 PF09989.9 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 2.9 7.5 11.4 34 4.0 11.4 2.0 1 1 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) FAA_hydro_N_2 PF18288.1 NODE_36661_length_584_cov_115.231330_g29491_i0forward_frame_3 - 4.1 7.9 6.0 2.8 8.4 2.0 2.6 2 1 1 3 3 3 0 Fumarylacetoacetase N-terminal domain 2 DASH_Spc19 PF08287.11 NODE_36655_length_584_cov_147.455373_g29486_i0reverse_frame_3 - 0.0087 16.0 1.7 0.01 15.7 0.6 1.6 2 0 0 2 2 2 1 Spc19 HI0933_like PF03486.14 NODE_36654_length_584_cov_148.021858_g29485_i0forward_frame_3 - 1.1e-41 142.9 0.0 1.4e-41 142.6 0.0 1.0 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 NODE_36654_length_584_cov_148.021858_g29485_i0forward_frame_3 - 0.037 13.1 0.0 0.055 12.5 0.0 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A DUF4661 PF15576.6 NODE_36648_length_584_cov_178.502732_g29479_i0forward_frame_2 - 0.26 11.1 4.9 0.34 10.8 4.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) DUF2201_N PF13203.6 NODE_36648_length_584_cov_178.502732_g29479_i0forward_frame_2 - 1.3 8.5 7.8 1.8 8.1 7.8 1.2 1 0 0 1 1 1 0 Putative metallopeptidase domain CDC45 PF02724.14 NODE_36648_length_584_cov_178.502732_g29479_i0forward_frame_2 - 3.1 6.0 15.9 3.5 5.8 15.9 1.1 1 0 0 1 1 1 0 CDC45-like protein Peptidase_C37 PF05416.12 NODE_36648_length_584_cov_178.502732_g29479_i0forward_frame_2 - 4.1 5.8 11.9 4.9 5.5 11.9 1.1 1 0 0 1 1 1 0 Southampton virus-type processing peptidase APH PF01636.23 NODE_36630_length_585_cov_3.856364_g29463_i0forward_frame_2 - 2.1e-31 109.7 0.9 2.5e-31 109.5 0.9 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 NODE_36630_length_585_cov_3.856364_g29463_i0forward_frame_2 - 7.8e-05 22.1 0.0 0.00014 21.3 0.0 1.4 2 0 0 2 2 2 1 Ecdysteroid kinase Kdo PF06293.14 NODE_36630_length_585_cov_3.856364_g29463_i0forward_frame_2 - 0.13 11.6 0.3 4 6.7 0.0 2.2 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF2373 PF10180.9 NODE_36621_length_585_cov_79.345455_g29454_i0reverse_frame_2 - 0.014 15.2 0.2 0.038 13.8 0.2 1.6 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2373) IL2 PF00715.17 NODE_36621_length_585_cov_79.345455_g29454_i0reverse_frame_2 - 0.12 12.3 1.1 0.4 10.6 0.5 1.9 2 0 0 2 2 2 0 Interleukin 2 Ribosomal_L4 PF00573.22 NODE_36616_length_585_cov_106.900000_g29449_i0reverse_frame_3 - 0.05 13.3 0.0 0.09 12.4 0.0 1.5 1 1 1 2 2 2 0 Ribosomal protein L4/L1 family CDKN3 PF05706.12 NODE_36615_length_585_cov_118.045455_g29448_i0reverse_frame_2 - 1.7e-08 34.3 0.0 2.9e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) DSPc PF00782.20 NODE_36615_length_585_cov_118.045455_g29448_i0reverse_frame_2 - 1.8e-07 31.0 0.0 2.7e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 NODE_36615_length_585_cov_118.045455_g29448_i0reverse_frame_2 - 0.00065 19.8 0.0 0.0011 19.1 0.0 1.3 1 0 0 1 1 1 1 Inositol hexakisphosphate Y_phosphatase3 PF13350.6 NODE_36615_length_585_cov_118.045455_g29448_i0reverse_frame_2 - 0.0011 19.0 0.0 0.0014 18.7 0.0 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 NODE_36615_length_585_cov_118.045455_g29448_i0reverse_frame_2 - 0.003 17.1 0.0 0.0044 16.6 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase2 PF03162.13 NODE_36615_length_585_cov_118.045455_g29448_i0reverse_frame_2 - 0.21 11.1 0.0 0.36 10.4 0.0 1.3 1 0 0 1 1 1 0 Tyrosine phosphatase family Choline_transpo PF04515.12 NODE_36615_length_585_cov_118.045455_g29448_i0forward_frame_3 - 0.027 13.7 0.3 0.033 13.4 0.3 1.1 1 0 0 1 1 1 0 Plasma-membrane choline transporter PIF PF05092.12 NODE_36608_length_585_cov_175.723636_g22261_i1forward_frame_2 - 0.48 9.1 2.2 0.58 8.8 2.2 1.1 1 0 0 1 1 1 0 Per os infectivity HCV_NS4a PF01006.20 NODE_36606_length_585_cov_193.345455_g29442_i0reverse_frame_3 - 5.3 6.9 6.5 16 5.4 1.0 2.3 2 0 0 2 2 2 0 Hepatitis C virus non-structural protein NS4a Tht1 PF04163.12 NODE_36606_length_585_cov_193.345455_g29442_i0forward_frame_2 - 0.72 8.6 2.0 1 8.0 2.0 1.2 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein Cytochrome_CBB3 PF13442.6 NODE_36597_length_585_cov_286.336364_g29434_i0reverse_frame_3 - 0.0015 18.8 0.4 0.0023 18.2 0.0 1.5 2 0 0 2 2 2 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 NODE_36597_length_585_cov_286.336364_g29434_i0reverse_frame_3 - 0.038 13.7 0.1 0.088 12.5 0.0 1.6 2 0 0 2 2 2 0 Cytochrome c-550 domain Defensin_5 PF18251.1 NODE_36597_length_585_cov_286.336364_g29434_i0reverse_frame_3 - 0.4 10.8 4.9 8.8 6.5 0.8 2.7 2 0 0 2 2 2 0 Fungal defensin Copsin HALZ PF02183.18 NODE_36585_length_585_cov_3327.345455_g29428_i0reverse_frame_3 - 0.11 12.7 1.1 0.11 12.7 1.1 2.3 1 1 1 2 2 2 0 Homeobox associated leucine zipper DivIC PF04977.15 NODE_36585_length_585_cov_3327.345455_g29428_i0reverse_frame_3 - 6.3 6.7 8.0 1.8 8.4 2.5 2.2 2 0 0 2 2 2 0 Septum formation initiator DUF5500 PF17604.2 ORF94449 - 0.064 13.4 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5500) DUF3139 PF11337.8 ORF91768 - 3.7 8.3 7.5 0.68 10.6 2.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) CSD PF00313.22 ORF89861 - 8.9e-15 54.3 0.1 1.5e-14 53.6 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain DDE_Tnp_IS1 PF03400.13 ORF87406 - 2.1e-78 261.0 0.9 2.8e-78 260.6 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF87406 - 0.13 12.5 0.4 0.47 10.7 0.4 1.8 1 1 0 1 1 1 0 DDE domain DUF5572 PF17733.1 ORF87174 - 0.27 11.1 0.1 0.52 10.2 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5572) DDE_Tnp_IS1 PF03400.13 ORF79809 - 2.1e-78 261.0 0.9 2.8e-78 260.6 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF79809 - 0.13 12.5 0.4 0.47 10.7 0.4 1.8 1 1 0 1 1 1 0 DDE domain Fimbrial PF00419.20 ORF78193 - 3.2e-23 82.7 0.0 4.1e-23 82.4 0.0 1.1 1 0 0 1 1 1 1 Fimbrial protein TFIIA PF03153.13 ORF76502 - 1.4e-09 38.4 0.1 1.6e-09 38.3 0.1 1.2 1 0 0 1 1 1 1 Transcription factor IIA, alpha/beta subunit DUF445 PF04286.12 ORF76502 - 0.017 14.9 0.2 0.02 14.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) rve_3 PF13683.6 ORF76502 - 0.028 14.2 0.1 13 5.6 0.0 2.8 2 1 1 3 3 3 0 Integrase core domain AceK PF06315.11 ORF76502 - 0.056 11.9 0.4 0.065 11.7 0.4 1.1 1 0 0 1 1 1 0 Isocitrate dehydrogenase kinase/phosphatase (AceK) TMEM43 PF07787.12 ORF76502 - 0.062 12.7 0.5 0.078 12.4 0.5 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 DUF5442 PF17514.2 ORF76502 - 0.12 12.6 1.6 0.22 11.8 0.2 2.0 3 0 0 3 3 3 0 Family of unknown function (DUF5442) WD40 PF00400.32 ORF74141 - 3.9e-21 75.0 7.3 3.5e-07 30.8 0.0 4.2 4 0 0 4 4 4 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF74141 - 5e-06 26.7 0.2 0.062 13.6 0.2 3.1 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF74141 - 0.00099 18.5 1.4 0.055 12.8 0.5 2.1 1 1 1 2 2 2 2 WD40-like domain HPS3_N PF14761.6 ORF74141 - 0.059 12.9 0.3 1.5 8.3 0.0 2.6 1 1 2 3 3 3 0 Hermansky-Pudlak syndrome 3 Hist_deacetyl PF00850.19 ORF74063 - 3.8e-41 141.5 0.2 4.5e-41 141.3 0.2 1.0 1 0 0 1 1 1 1 Histone deacetylase domain CLN3 PF02487.17 ORF72701 - 6.9e-11 41.8 8.0 8.4e-11 41.5 8.0 1.1 1 0 0 1 1 1 1 CLN3 protein Hyd_WA PF06462.12 ORF67708 - 0.11 12.5 1.6 0.25 11.4 1.6 1.8 1 0 0 1 1 1 0 Propeller SIT PF15330.6 ORF6647 - 1.6 9.2 4.7 2.8 8.4 4.5 1.6 1 1 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT Prok-E2_A PF14457.6 ORF64565 - 0.11 12.1 0.1 0.43 10.2 0.1 1.9 1 1 1 2 2 2 0 Prokaryotic E2 family A BNR_2 PF13088.6 ORF57772 - 0.024 13.9 0.6 0.032 13.5 0.6 1.2 1 0 0 1 1 1 0 BNR repeat-like domain DDE_Tnp_IS1 PF03400.13 ORF5519 - 2.1e-78 261.0 0.9 2.8e-78 260.6 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF5519 - 0.13 12.5 0.4 0.47 10.7 0.4 1.8 1 1 0 1 1 1 0 DDE domain Rdx PF10262.9 ORF51187 - 0.019 15.2 2.1 0.071 13.3 0.1 2.1 2 0 0 2 2 2 0 Rdx family NCD3G PF07562.14 ORF472 - 0.0036 17.2 4.5 0.0036 17.2 4.5 4.5 3 1 0 3 3 3 1 Nine Cysteines Domain of family 3 GPCR Cuticle_3 PF11018.8 ORF46741 - 0.012 15.9 19.7 0.015 15.5 19.7 1.1 1 0 0 1 1 1 0 Pupal cuticle protein C1 Baculo_11_kDa PF06143.11 ORF44211 - 0.53 9.9 3.6 1.1 8.9 3.6 1.5 1 0 0 1 1 1 0 Baculovirus 11 kDa family PG_binding_1 PF01471.18 ORF43592 - 0.014 15.6 0.3 0.037 14.2 0.3 1.8 1 1 0 1 1 1 0 Putative peptidoglycan binding domain Laps PF10169.9 ORF43592 - 0.042 14.4 3.3 0.15 12.7 0.9 2.2 2 0 0 2 2 2 0 Learning-associated protein Chordopox_A15 PF05846.12 ORF43592 - 0.079 13.2 0.1 0.29 11.4 0.0 1.9 2 0 0 2 2 2 0 Chordopoxvirus A15 protein DUF2959 PF11172.8 ORF43592 - 0.081 13.1 0.5 1.4 9.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2959) Myb_DNA-binding PF00249.31 ORF43592 - 0.092 13.0 1.0 13 6.0 0.0 3.2 3 0 0 3 3 3 0 Myb-like DNA-binding domain DUF1296 PF06972.11 ORF43592 - 0.17 12.0 3.6 1.8 8.8 0.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1296) Rpp20 PF12328.8 ORF43592 - 0.66 9.9 3.2 0.21 11.5 0.4 1.6 2 0 0 2 2 2 0 Rpp20 subunit of nuclear RNase MRP and P DUF3138 PF11336.8 ORF42300 - 0.73 8.4 3.5 0.88 8.1 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Metalloenzyme PF01676.18 ORF42207 - 1.3e-61 208.1 0.1 1.6e-61 207.9 0.1 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Sulfatase PF00884.23 ORF42207 - 0.0019 17.7 0.0 0.0026 17.2 0.0 1.3 1 1 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF42207 - 0.0026 17.4 0.0 0.0026 17.4 0.0 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PGM_PMM_II PF02879.16 ORF42207 - 0.0072 16.9 0.0 0.48 11.1 0.0 2.6 3 0 0 3 3 3 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PglZ PF08665.12 ORF42207 - 0.011 15.8 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 0 PglZ domain Phage_TTP_12 PF16461.5 ORF42207 - 0.011 15.4 0.1 0.039 13.6 0.0 1.9 2 1 0 2 2 2 0 Lambda phage tail tube protein, TTP UPF0020 PF01170.18 ORF42207 - 0.035 13.8 0.0 0.053 13.2 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 PIG-L PF02585.17 ORF42207 - 0.081 13.6 0.0 0.34 11.6 0.0 1.9 2 0 0 2 2 2 0 GlcNAc-PI de-N-acetylase SBP_bac_8 PF13416.6 ORF42207 - 0.16 11.8 0.0 0.26 11.0 0.0 1.3 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein DDE_Tnp_IS1 PF03400.13 ORF38758 - 2.1e-78 261.0 0.9 2.8e-78 260.6 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF38758 - 0.13 12.5 0.4 0.47 10.7 0.4 1.8 1 1 0 1 1 1 0 DDE domain EF-hand_7 PF13499.6 ORF382 - 5.4e-14 52.4 0.1 1.7e-10 41.2 0.1 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF382 - 5.3e-11 41.3 0.1 0.0001 21.6 0.0 3.1 3 1 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF382 - 1e-08 34.3 0.0 0.0044 16.5 0.0 2.7 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF382 - 1.3e-06 27.8 0.0 0.13 12.3 0.0 3.0 2 1 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF382 - 7.5e-05 22.5 0.3 0.037 13.9 0.1 2.7 2 1 0 2 2 2 2 EF-hand domain pair Rdx PF10262.9 ORF37563 - 0.019 15.2 2.1 0.071 13.3 0.1 2.1 2 0 0 2 2 2 0 Rdx family PepSY_2 PF13670.6 ORF37389 - 0.18 11.8 1.0 0.27 11.3 1.0 1.2 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain Proteasome PF00227.26 ORF37108 - 5.2e-36 123.9 0.0 6.3e-36 123.6 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit CCDC24 PF15669.5 ORF35442 - 0.7 9.7 3.4 1.1 9.1 3.4 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family BES1_N PF05687.13 ORF35442 - 1.5 9.2 7.1 2.1 8.7 7.1 1.3 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal DUF1645 PF07816.11 ORF35442 - 2.1 8.9 8.7 2.7 8.5 8.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1645) Topo_C_assoc PF14370.6 ORF34928 - 0.12 12.4 0.1 0.2 11.6 0.1 1.3 1 0 0 1 1 1 0 C-terminal topoisomerase domain Proteasome PF00227.26 ORF32422 - 5.2e-36 123.9 0.0 6.3e-36 123.6 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit DUF5595 PF18077.1 ORF29781 - 0.49 10.5 2.7 0.84 9.8 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5595) DUF3280 PF11684.8 ORF29781 - 1.2 9.5 5.3 0.24 11.8 1.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2380) Baculo_11_kDa PF06143.11 ORF27622 - 0.53 9.9 3.6 1.1 8.9 3.6 1.5 1 0 0 1 1 1 0 Baculovirus 11 kDa family EF-hand_1 PF00036.32 ORF2450 - 1.8e-15 55.2 13.1 0.00016 21.0 0.4 5.3 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF2450 - 1.9e-14 52.3 13.1 0.00024 20.8 0.3 5.0 4 1 1 5 5 5 4 EF-hand domain EF-hand_7 PF13499.6 ORF2450 - 2.3e-12 47.2 9.4 1.3e-05 25.5 0.5 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF2450 - 2.4e-10 40.1 9.1 2.1e-07 30.7 0.5 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF2450 - 3.1e-09 35.9 14.8 0.0044 16.4 0.2 5.2 5 1 0 5 5 5 3 EF hand Caleosin PF05042.13 ORF2450 - 0.12 12.4 3.7 3.6 7.5 0.3 2.8 1 1 0 2 2 2 0 Caleosin related protein Rotamase PF00639.21 ORF23236 - 0.0015 19.5 0.0 0.0035 18.3 0.0 1.7 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF23236 - 0.03 15.2 0.0 0.046 14.6 0.0 1.4 1 1 0 1 1 1 0 PPIC-type PPIASE domain AC_N PF16214.5 ORF21871 - 0.33 10.0 1.7 0.46 9.6 1.7 1.2 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF2070 PF09843.9 ORF21871 - 3.8 5.7 9.7 4.5 5.4 9.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) GRP PF07172.11 ORF21769 - 3.5 8.4 34.1 6.3 7.6 34.1 1.5 1 0 0 1 1 1 0 Glycine rich protein family Ion_trans_2 PF07885.16 ORF19541 - 1.4e-07 31.3 15.4 2.8e-07 30.4 15.4 1.6 1 1 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF19541 - 3.9e-05 23.0 10.6 5.2e-05 22.6 10.6 1.1 1 0 0 1 1 1 1 Ion transport protein DUF4834 PF16118.5 ORF19541 - 0.77 10.8 4.7 6.6 7.8 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) IRK PF01007.20 ORF19541 - 0.92 9.3 7.1 1.8 8.4 7.1 1.5 1 1 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain Chordopox_A13L PF05961.11 ORF19541 - 5.1 7.4 13.5 0.094 13.0 1.9 2.7 3 0 0 3 3 3 0 Chordopoxvirus A13L protein UPF0193 PF05250.11 ORF1902 - 0.0056 16.5 2.2 0.0056 16.5 2.2 1.8 1 1 0 2 2 2 1 Uncharacterised protein family (UPF0193) DUF4116 PF13475.6 ORF1777 - 5.1e-21 74.1 0.0 5.5e-09 35.6 0.0 3.3 3 0 0 3 3 3 3 Domain of unknown function (DUF4116) DGF-1_5 PF11038.8 ORF1765 - 0.082 12.2 0.2 0.096 12.0 0.2 1.2 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 DDE_Tnp_IS1 PF03400.13 ORF17146 - 2.1e-78 261.0 0.9 2.8e-78 260.6 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF17146 - 0.13 12.5 0.4 0.47 10.7 0.4 1.8 1 1 0 1 1 1 0 DDE domain YbgS PF13985.6 ORF15724 - 7.3 6.9 6.6 10 6.4 6.6 1.3 1 0 0 1 1 1 0 YbgS-like protein ZapD PF07072.11 ORF152061 - 0.053 13.3 0.6 2 8.1 0.2 2.3 2 0 0 2 2 2 0 Cell division protein DUF5500 PF17604.2 ORF151843 - 0.064 13.4 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5500) AF-4 PF05110.13 ORF151113 - 1.7 6.6 4.0 2.1 6.4 4.0 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DDE_Tnp_IS1 PF03400.13 ORF150577 - 2.1e-78 261.0 0.9 2.8e-78 260.6 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF150577 - 0.13 12.5 0.4 0.47 10.7 0.4 1.8 1 1 0 1 1 1 0 DDE domain DUF1168 PF06658.12 ORF150142 - 1.3 8.8 20.2 0.18 11.6 4.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1168) EF-hand_1 PF00036.32 ORF148556 - 2.3e-10 39.3 0.5 5.4e-05 22.4 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF148556 - 3.9e-09 35.6 0.1 5.9e-05 22.4 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF148556 - 4.3e-09 36.7 0.0 7.9e-09 35.9 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF148556 - 7.1e-08 31.8 0.5 0.00031 20.4 0.0 2.7 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF148556 - 0.00045 20.0 0.3 0.079 12.8 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair DUF4860 PF16152.5 ORF148556 - 0.0029 17.4 0.0 0.0071 16.2 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4860) Beta-lactamase2 PF13354.6 ORF148556 - 0.052 13.2 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase enzyme family Peripla_BP_3 PF13377.6 ORF14841 - 7.1e-12 46.0 0.0 8.3e-12 45.7 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF14841 - 0.00047 19.7 0.0 0.001 18.5 0.0 1.7 1 1 1 2 2 2 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF14841 - 0.00054 19.6 0.0 0.00099 18.8 0.0 1.3 1 1 0 1 1 1 1 Periplasmic binding protein domain Methyltransf_11 PF08241.12 ORF148002 - 3.5e-10 40.4 0.0 5.2e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF148002 - 1.3e-09 38.2 0.0 1.5e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF148002 - 6.7e-08 33.1 0.0 1.1e-07 32.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF148002 - 1.1e-07 32.4 0.0 1.7e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF148002 - 2e-07 31.0 0.0 2.5e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF148002 - 0.0017 17.8 0.0 0.0019 17.6 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Receptor_2B4 PF11465.8 ORF14776 - 0.1 12.8 0.5 0.2 11.9 0.5 1.4 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 DUF1072 PF06380.11 ORF145254 - 0.048 13.5 2.5 6.7 6.7 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) 2OG-FeII_Oxy PF03171.20 ORF143475 - 0.00017 22.0 0.0 0.00023 21.6 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily CRAL_TRIO PF00650.20 ORF142907 - 5.9e-05 22.8 0.0 0.00011 21.9 0.0 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF142907 - 0.09 13.0 0.7 0.21 11.8 0.7 1.7 1 0 0 1 1 1 0 CRAL/TRIO, N-terminal domain DDE_Tnp_IS1 PF03400.13 ORF141754 - 2.1e-78 261.0 0.9 2.8e-78 260.6 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF141754 - 0.13 12.5 0.4 0.47 10.7 0.4 1.8 1 1 0 1 1 1 0 DDE domain Ribosomal_S15 PF00312.22 ORF140999 - 4e-18 65.4 1.3 4e-18 65.4 1.3 1.8 2 0 0 2 2 2 1 Ribosomal protein S15 SIN1 PF05422.12 ORF140999 - 0.094 13.3 0.2 0.15 12.6 0.2 1.4 1 0 0 1 1 1 0 Stress-activated map kinase interacting protein 1 (SIN1) RSRP PF17069.5 ORF13919 - 0.71 9.4 11.6 1.1 8.8 11.6 1.2 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 RS4NT PF08071.12 ORF136578 - 0.041 14.0 3.8 0.098 12.8 3.8 1.6 1 0 0 1 1 1 0 RS4NT (NUC023) domain Peptidase_C97 PF05903.14 ORF135617 - 0.031 14.1 0.2 0.043 13.6 0.2 1.3 1 0 0 1 1 1 0 PPPDE putative peptidase domain WXG100 PF06013.12 ORF134357 - 0.031 14.5 0.0 26 5.1 0.0 3.2 2 1 2 4 4 4 0 Proteins of 100 residues with WXG Sulfakinin PF08257.11 ORF134357 - 0.084 12.9 12.9 1.3e+02 3.2 0.0 6.5 7 0 0 7 7 7 0 Sulfakinin family L_HMGIC_fpl PF10242.9 ORF134357 - 0.16 12.2 0.0 42 4.3 0.0 3.0 1 1 2 3 3 3 0 Lipoma HMGIC fusion partner-like protein Msg2_C PF12373.8 ORF134357 - 2.9 7.4 13.0 17 4.9 0.3 3.6 4 0 0 4 4 4 0 Major surface glycoprotein 2 C terminal Sigma54_activat PF00158.26 ORF133848 - 3.3e-21 75.7 0.6 5.6e-21 75.0 0.6 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 ORF133848 - 1.1e-15 57.1 0.7 1.1e-15 57.1 0.7 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family Sigma54_activ_2 PF14532.6 ORF133848 - 1.7e-05 25.0 0.0 3.9e-05 23.8 0.0 1.7 2 0 0 2 2 2 1 Sigma-54 interaction domain HTH_30 PF13556.6 ORF133848 - 0.0019 18.0 1.9 0.0038 17.0 0.1 2.3 2 1 1 3 3 3 1 PucR C-terminal helix-turn-helix domain HTH_23 PF13384.6 ORF133848 - 0.0049 16.6 0.0 0.014 15.1 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 ORF133848 - 0.009 16.1 0.0 0.022 14.9 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_1 PF00126.27 ORF133848 - 0.018 15.0 0.3 0.11 12.5 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family CofC PF01983.16 ORF133848 - 0.025 13.8 0.0 0.25 10.5 0.0 2.0 2 0 0 2 2 2 0 Guanylyl transferase CofC like Phage_NinH PF06322.11 ORF133848 - 0.028 14.3 0.1 0.056 13.3 0.1 1.4 1 0 0 1 1 1 0 Phage NinH protein PsbU PF06514.11 ORF133787 - 3.1e-24 84.8 0.1 4.2e-24 84.4 0.1 1.2 1 0 0 1 1 1 1 Photosystem II 12 kDa extrinsic protein (PsbU) HHH_3 PF12836.7 ORF133787 - 0.0071 16.6 0.0 0.021 15.1 0.0 1.8 1 1 0 1 1 1 1 Helix-hairpin-helix motif DUF4691 PF15762.5 ORF133639 - 0.056 13.6 0.1 0.082 13.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4691) CSD PF00313.22 ORF132640 - 8.9e-15 54.3 0.1 1.5e-14 53.6 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain EF-hand_7 PF13499.6 ORF130360 - 1.6e-11 44.5 0.1 4e-11 43.2 0.1 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF130360 - 3e-11 42.0 0.1 7e-05 22.1 0.0 3.2 3 1 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF130360 - 3.6e-09 35.7 0.0 0.0031 16.9 0.0 2.9 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF130360 - 5.7e-07 29.0 0.0 0.081 12.9 0.0 3.1 2 1 1 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF130360 - 0.00088 19.1 1.1 0.051 13.4 0.1 2.7 1 1 1 2 2 2 1 EF-hand domain pair ABC2_membrane_3 PF12698.7 ORF130360 - 0.071 12.2 0.5 0.091 11.9 0.5 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein Dockerin_1 PF00404.18 ORF130360 - 0.089 13.0 0.0 0.24 11.6 0.0 1.8 1 0 0 1 1 1 0 Dockerin type I domain Baculo_LEF-2 PF03041.14 ORF12909 - 0.19 11.4 0.3 0.32 10.6 0.3 1.3 1 0 0 1 1 1 0 lef-2 YebO PF13974.6 ORF12896 - 0.16 12.0 0.4 0.16 12.0 0.4 1.7 2 0 0 2 2 2 0 YebO-like protein Cmc1 PF08583.10 ORF127488 - 0.013 15.5 3.3 0.013 15.5 3.3 1.6 2 0 0 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like CX9C PF16860.5 ORF127488 - 0.018 15.0 0.7 0.018 15.0 0.7 2.1 1 1 1 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, CHCH PF06747.13 ORF127488 - 0.23 11.7 3.4 7.9 6.7 0.4 2.5 3 0 0 3 3 3 0 CHCH domain 2TM PF13239.6 ORF122594 - 0.023 15.0 5.2 0.023 15.0 5.2 3.1 1 1 2 3 3 3 0 2TM domain DDE_Tnp_IS1 PF03400.13 ORF120355 - 2.1e-78 261.0 0.9 2.8e-78 260.6 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF120355 - 0.13 12.5 0.4 0.47 10.7 0.4 1.8 1 1 0 1 1 1 0 DDE domain CAC1F_C PF16885.5 ORF119678 - 4.3 6.9 11.1 5.3 6.6 11.1 1.0 1 0 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term TPR_1 PF00515.28 ORF118601 - 1.1e-07 31.3 5.9 0.0075 16.0 0.1 3.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF118601 - 4e-06 26.5 7.2 0.0055 16.7 0.2 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF118601 - 7.1e-05 22.8 0.4 0.042 13.9 0.1 2.5 1 1 1 2 2 2 2 Fis1 C-terminal tetratricopeptide repeat TPR_19 PF14559.6 ORF118601 - 0.0025 18.3 4.0 0.076 13.5 0.6 3.3 2 1 2 4 4 4 1 Tetratricopeptide repeat MCLC PF05934.11 ORF118601 - 0.0044 15.8 0.3 0.0054 15.5 0.3 1.1 1 0 0 1 1 1 1 Mid-1-related chloride channel (MCLC) COPI_C PF06957.11 ORF118601 - 0.0072 15.1 1.4 0.012 14.5 1.4 1.3 1 0 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus TPR_8 PF13181.6 ORF118601 - 0.0075 16.4 2.6 0.16 12.3 0.1 3.2 2 1 1 3 3 3 1 Tetratricopeptide repeat Thump_like PF18096.1 ORF118601 - 0.062 13.2 0.3 0.1 12.6 0.3 1.4 1 0 0 1 1 1 0 THUMP domain-like Adenine_glyco PF03352.13 ORF118601 - 0.09 12.5 0.9 0.14 12.0 0.9 1.2 1 0 0 1 1 1 0 Methyladenine glycosylase TPR_14 PF13428.6 ORF118601 - 0.42 11.6 2.0 2.7 9.0 0.1 2.8 3 1 0 3 3 3 0 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 ORF118601 - 0.62 10.5 4.1 2.3 8.7 0.5 2.6 2 1 1 3 3 3 0 Alkyl sulfatase dimerisation TPR_16 PF13432.6 ORF118601 - 0.69 10.6 3.7 4.8 7.9 0.0 3.0 3 1 0 3 3 3 0 Tetratricopeptide repeat CSD PF00313.22 ORF118253 - 8.9e-15 54.3 0.1 1.5e-14 53.6 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain PfkB PF00294.24 ORF113965 - 2.8e-41 141.8 0.0 3.4e-41 141.5 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF113965 - 0.0012 18.3 0.0 0.0015 18.0 0.0 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase DDE_Tnp_IS1 PF03400.13 ORF109571 - 2.1e-78 261.0 0.9 2.8e-78 260.6 0.9 1.1 1 0 0 1 1 1 1 IS1 transposase DDE_Tnp_IS240 PF13610.6 ORF109571 - 0.13 12.5 0.4 0.47 10.7 0.4 1.8 1 1 0 1 1 1 0 DDE domain Glutaredoxin2_C PF04399.13 ORF104475 - 0.005 16.7 0.2 0.0095 15.8 0.2 1.4 1 0 0 1 1 1 1 Glutaredoxin 2, C terminal domain Thioredoxin PF00085.20 ORF101893 - 3.4e-20 71.9 0.1 3.4e-20 71.9 0.1 1.9 2 1 0 2 2 2 1 Thioredoxin OST3_OST6 PF04756.13 ORF101893 - 5.2e-07 29.3 0.3 1.1e-06 28.3 0.0 1.5 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF101893 - 8e-06 26.3 0.1 8e-06 26.3 0.1 2.3 1 1 1 2 2 2 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF101893 - 0.0068 16.7 2.8 0.52 10.7 0.0 3.3 2 2 1 3 3 3 1 Thioredoxin-like Ntox28 PF15605.6 ORF101893 - 0.022 15.0 2.4 0.5 10.6 1.6 2.3 2 0 0 2 2 2 0 Bacterial toxin 28 Thioredoxin_7 PF13899.6 ORF101893 - 0.045 13.9 1.3 0.053 13.7 0.0 1.8 2 0 0 2 2 1 0 Thioredoxin-like eIF3_N PF09440.10 ORF101893 - 0.079 13.4 7.9 0.12 12.8 7.9 1.2 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain AcylCoA_dehyd_C PF12186.8 ORF101893 - 0.16 12.1 7.5 0.12 12.5 5.1 1.9 1 1 1 2 2 2 0 Acyl-CoA dehydrogenase C terminal DUF2937 PF11157.8 ORF101893 - 0.2 11.4 2.4 0.32 10.7 2.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) Cdh1_DBD_1 PF18196.1 ORF101893 - 0.3 11.4 10.5 0.51 10.7 10.5 1.4 1 0 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 YlqD PF11068.8 ORF101893 - 0.34 11.3 9.4 0.53 10.7 9.4 1.2 1 0 0 1 1 1 0 YlqD protein TMPIT PF07851.13 ORF101893 - 5.7 6.1 6.5 8.4 5.5 6.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF3987 PF13148.6 ORF101893 - 9.7 5.1 10.2 14 4.6 10.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) DUF5626 PF18540.1 NODE_36981_length_578_cov_3.156538_g29779_i0forward_frame_1 - 0.22 12.1 3.9 1.3 9.6 3.9 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF5626) zf-rbx1 PF12678.7 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 8.5e-17 61.2 8.8 8.5e-17 61.2 8.8 1.8 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 3.6e-09 36.5 3.2 7.5e-09 35.5 3.2 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_2 PF13639.6 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 0.0001 22.6 10.4 0.0001 22.6 10.4 2.9 2 2 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 0.00013 21.8 2.6 0.00013 21.8 2.6 2.6 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 0.016 15.0 7.9 0.016 15.0 7.9 3.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 0.032 14.0 3.9 0.032 14.0 3.9 1.9 2 0 0 2 2 2 0 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_1 - 1.9 8.6 7.1 0.21 11.7 2.1 2.0 2 0 0 2 2 2 0 RING-type zinc-finger Lipoprotein_17 PF04200.12 NODE_36939_length_579_cov_42.944853_g29741_i0reverse_frame_1 - 0.043 14.2 6.4 0.096 13.0 6.4 1.6 1 0 0 1 1 1 0 Lipoprotein associated domain RuBisCO_large PF00016.20 NODE_36907_length_579_cov_423.496324_g29710_i0reverse_frame_1 - 0.033 13.4 0.0 0.041 13.1 0.0 1.1 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, catalytic domain Fib_alpha PF08702.10 NODE_36894_length_580_cov_2.282569_g29699_i0reverse_frame_3 - 0.0056 16.9 0.2 0.0079 16.4 0.2 1.2 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family UPF0242 PF06785.11 NODE_36894_length_580_cov_2.282569_g29699_i0reverse_frame_3 - 0.04 14.0 1.4 0.068 13.3 1.4 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2031 PF09592.10 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.001 18.6 12.9 0.001 18.6 12.9 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF2031) GAS PF13851.6 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.0014 18.0 3.0 0.0014 18.0 3.0 2.7 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding ATG16 PF08614.11 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.025 14.8 8.1 0.25 11.5 0.7 2.3 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) LXG PF04740.12 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.025 14.3 10.5 0.04 13.6 10.2 1.6 1 1 0 1 1 1 0 LXG domain of WXG superfamily ApoLp-III PF07464.11 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.043 13.9 5.7 0.057 13.5 5.2 1.6 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Fib_alpha PF08702.10 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.21 11.8 16.0 0.16 12.1 6.2 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family LOH1CR12 PF10158.9 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.69 9.9 6.6 0.36 10.9 3.7 1.9 1 1 1 2 2 2 0 Tumour suppressor protein NPV_P10 PF05531.12 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 0.82 10.2 8.4 20 5.7 7.9 3.2 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ACCA PF03255.14 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 1.1 9.1 5.4 11 5.9 1.5 2.3 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF2935 PF11155.8 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 2.2 8.6 8.0 9.4 6.6 2.4 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) DUF1664 PF07889.12 NODE_36892_length_580_cov_2.344954_g29697_i0reverse_frame_3 - 6.7 6.8 7.7 2.4 8.2 2.2 2.4 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) Transglut_core2 PF13369.6 NODE_36890_length_580_cov_2.482569_g29695_i0reverse_frame_2 - 1.1e-29 103.0 0.0 1.6e-29 102.5 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily TPR_9 PF13371.6 NODE_36890_length_580_cov_2.482569_g29695_i0reverse_frame_2 - 8e-27 93.2 0.2 1.7e-26 92.1 0.2 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat Methyltransf_PK PF05891.12 NODE_36890_length_580_cov_2.482569_g29695_i0reverse_frame_2 - 0.077 12.5 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Ig_J_chain PF15097.6 NODE_36886_length_580_cov_3.286239_g29691_i0forward_frame_2 - 0.064 13.1 0.2 0.098 12.5 0.2 1.3 1 0 0 1 1 1 0 Immunoglobulin J chain CAF20 PF17052.5 NODE_36885_length_580_cov_3.466055_g29690_i0reverse_frame_3 - 0.019 15.1 0.6 0.019 15.1 0.6 1.4 1 1 0 1 1 1 0 Cap associated factor Bac_export_2 PF01312.19 NODE_36885_length_580_cov_3.466055_g29690_i0forward_frame_3 - 1.3e-67 228.3 0.3 1.6e-67 228.0 0.3 1.0 1 0 0 1 1 1 1 FlhB HrpN YscU SpaS Family DUF3561 PF12084.8 NODE_36885_length_580_cov_3.466055_g29690_i0forward_frame_3 - 1.4 9.0 7.8 0.22 11.5 2.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3561) zf-DNL PF05180.12 NODE_36884_length_580_cov_3.847706_g29689_i0reverse_frame_3 - 1.6e-05 24.8 1.3 3.3e-05 23.7 1.3 1.5 1 0 0 1 1 1 1 DNL zinc finger DUF1003 PF06210.11 NODE_36877_length_580_cov_77.532110_g29682_i0reverse_frame_3 - 0.33 11.1 2.2 0.66 10.1 2.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) Peptidase_M16_C PF05193.21 NODE_36860_length_580_cov_236.414679_g27302_i2reverse_frame_3 - 0.1 12.6 0.1 24 4.8 0.0 3.4 1 1 2 3 3 3 0 Peptidase M16 inactive domain KH_4 PF13083.6 NODE_36860_length_580_cov_236.414679_g27302_i2reverse_frame_2 - 0.29 11.0 8.1 8.7 6.3 0.1 3.6 4 0 0 4 4 4 0 KH domain HU-CCDC81_bac_1 PF18174.1 NODE_36860_length_580_cov_236.414679_g27302_i2forward_frame_3 - 0.091 12.7 0.4 58 3.7 0.0 3.5 1 1 3 4 4 4 0 CCDC81-like prokaryotic HU domain 1 DUF2610 PF11020.8 NODE_36860_length_580_cov_236.414679_g27302_i2forward_frame_3 - 7.5 6.5 7.6 7.1 6.6 1.2 3.2 1 1 3 4 4 4 0 Domain of unknown function (DUF2610) DUF1856 PF08983.10 NODE_36860_length_580_cov_236.414679_g27302_i2forward_frame_2 - 1.7 9.0 11.1 1.8 8.9 2.0 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF1856) Gemini_C4 PF01492.17 NODE_36858_length_580_cov_241.521101_g29664_i0reverse_frame_3 - 0.029 14.3 0.1 0.049 13.5 0.1 1.4 1 0 0 1 1 1 0 Geminivirus C4 protein Hydrolase_4 PF12146.8 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 3.7e-06 26.4 0.2 0.021 14.1 0.4 2.2 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 6.7e-06 26.9 3.1 8.5e-06 26.5 3.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 1.7e-05 24.4 0.0 0.0012 18.3 0.0 2.1 1 1 1 2 2 2 1 Prolyl oligopeptidase family Lipase_3 PF01764.25 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 7.8e-05 22.6 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DLH PF01738.18 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.00011 21.8 0.0 0.00015 21.4 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Esterase PF00756.20 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.001 18.8 0.3 0.0014 18.3 0.2 1.4 1 1 0 1 1 1 1 Putative esterase Esterase_phd PF10503.9 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.0067 15.9 0.3 0.055 13.0 0.5 1.9 1 1 1 2 2 2 1 Esterase PHB depolymerase Abhydrolase_2 PF02230.16 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.0078 16.0 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.20 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.018 14.7 0.0 0.043 13.5 0.0 1.7 1 1 1 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.093 12.6 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF2048 PF09752.9 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.15 11.2 0.0 0.2 10.7 0.0 1.1 1 0 0 1 1 1 0 Abhydrolase domain containing 18 Abhydrolase_5 PF12695.7 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.17 11.7 0.0 0.24 11.2 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family PGAP1 PF07819.13 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.23 11.1 0.0 0.32 10.7 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein DUF1057 PF06342.12 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.25 10.3 0.0 0.29 10.1 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) DUF2974 PF11187.8 NODE_36858_length_580_cov_241.521101_g29664_i0forward_frame_2 - 0.26 10.8 0.0 0.36 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) BLI1 PF17324.2 NODE_36856_length_580_cov_284.377982_g28455_i1reverse_frame_2 - 0.0054 17.4 1.3 0.011 16.4 0.2 2.0 2 0 0 2 2 2 1 BLOC-1 interactor 1 Thioredoxin_2 PF13098.6 NODE_36856_length_580_cov_284.377982_g28455_i1reverse_frame_2 - 0.021 15.3 0.1 0.032 14.7 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like domain DUF1178 PF06676.11 NODE_36856_length_580_cov_284.377982_g28455_i1reverse_frame_2 - 0.15 12.5 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) SKIP_SNW PF02731.15 NODE_36852_length_580_cov_441.460550_g29659_i0reverse_frame_2 - 1.2 8.8 5.8 1.9 8.2 5.8 1.3 1 0 0 1 1 1 0 SKIP/SNW domain AAA_13 PF13166.6 NODE_36852_length_580_cov_441.460550_g29659_i0reverse_frame_2 - 1.6 7.3 6.4 2.1 6.9 6.4 1.1 1 0 0 1 1 1 0 AAA domain Retrotrans_gag PF03732.17 NODE_36852_length_580_cov_441.460550_g29659_i0reverse_frame_2 - 2.3 8.6 5.8 0.99 9.7 2.1 2.1 1 1 0 2 2 2 0 Retrotransposon gag protein EF-hand_14 PF17959.1 NODE_36850_length_580_cov_495.478899_g29658_i0forward_frame_2 - 0.072 13.4 0.0 0.15 12.4 0.0 1.5 2 0 0 2 2 2 0 EF-hand domain fn3_3 PF14686.6 NODE_36831_length_581_cov_59.686813_g13927_i1reverse_frame_3 - 0.00099 18.9 1.2 0.0023 17.7 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide lyase family 4, domain II Cytomega_UL84 PF06284.11 NODE_36831_length_581_cov_59.686813_g13927_i1reverse_frame_3 - 0.086 11.3 1.2 0.11 10.9 1.2 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein FlhD PF05247.13 NODE_36831_length_581_cov_59.686813_g13927_i1forward_frame_2 - 0.009 16.3 0.0 0.017 15.4 0.0 1.4 1 0 0 1 1 1 1 Flagellar transcriptional activator (FlhD) DUF1450 PF07293.11 NODE_36822_length_581_cov_84.630037_g29633_i0forward_frame_2 - 0.099 12.5 0.1 0.17 11.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) zf-BED PF02892.15 NODE_36822_length_581_cov_84.630037_g29633_i0forward_frame_2 - 0.35 10.9 3.9 4 7.5 0.1 2.3 2 0 0 2 2 2 0 BED zinc finger DUF1944 PF09175.10 NODE_36816_length_581_cov_135.043956_g29627_i0forward_frame_2 - 0.065 13.1 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1944) ESPR PF13018.6 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_3 - 3.7 7.4 10.4 2.5e+02 1.6 0.1 7.0 9 0 0 9 9 9 0 Extended Signal Peptide of Type V secretion system Peptidase_M16_C PF05193.21 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_2 - 0.0065 16.5 3.7 61 3.6 0.0 6.4 1 1 6 7 7 7 1 Peptidase M16 inactive domain DUF1476 PF07345.11 NODE_36803_length_581_cov_501.543956_g29614_i0reverse_frame_2 - 3 8.2 22.9 52 4.3 0.1 7.9 1 1 8 9 9 9 0 ATPase inhibitor subunit zeta FNIP PF05725.12 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 6.8e-54 179.8 26.6 1.7e-13 50.5 1.8 5.1 3 2 1 5 5 5 5 FNIP Repeat LRR_5 PF13306.6 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 8.7e-09 35.4 3.1 0.00021 21.2 0.2 2.6 1 1 1 2 2 2 2 BspA type Leucine rich repeat region (6 copies) NosD PF05048.13 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.00018 20.9 0.0 0.75 9.0 0.0 1.8 1 1 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Phage_min_tail PF05939.13 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.0053 17.1 1.5 11 6.4 0.0 4.0 3 1 2 5 5 5 1 Phage minor tail protein DUF5536 PF17688.1 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.022 14.6 0.4 32 4.4 0.0 3.8 4 0 0 4 4 4 0 Family of unknown function (DUF5536) Glyco_hydro_65C PF03633.15 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.12 12.3 8.8 1.8e+02 2.2 0.0 6.7 8 0 0 8 8 8 0 Glycosyl hydrolase family 65, C-terminal domain AbiJ_NTD5 PF18865.1 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_3 - 0.19 11.5 1.8 61 3.5 0.0 3.9 5 0 0 5 5 5 0 AbiJ N-terminal domain 5 CaMKII_AD PF08332.10 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_2 - 0.00073 19.7 1.4 46 4.2 0.0 5.4 1 1 5 6 6 6 1 Calcium/calmodulin dependent protein kinase II association domain DUF2857 PF11198.8 NODE_36803_length_581_cov_501.543956_g29614_i0forward_frame_2 - 1.6 8.5 2.7 9.2 6.0 0.6 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF2857) CwfJ_C_2 PF04676.14 NODE_36789_length_581_cov_21430.663004_g29607_i0reverse_frame_2 - 3.1e-17 63.3 0.1 5.8e-17 62.4 0.1 1.5 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 2 CwfJ_C_1 PF04677.15 NODE_36789_length_581_cov_21430.663004_g29607_i0reverse_frame_2 - 0.00071 19.4 0.0 0.0015 18.4 0.0 1.5 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 KdgT PF03812.13 NODE_36789_length_581_cov_21430.663004_g29607_i0forward_frame_2 - 0.0073 15.7 1.7 0.0097 15.3 1.7 1.1 1 0 0 1 1 1 1 2-keto-3-deoxygluconate permease Longin_2 PF18639.1 NODE_36779_length_582_cov_7.552102_g29597_i0reverse_frame_2 - 0.016 15.0 1.6 0.36 10.7 1.6 2.2 1 1 0 1 1 1 0 Yeast longin domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks122.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks122.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks122.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks122.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- bPH_6 PF10756.9 NODE_36763_length_582_cov_101.903108_g29581_i0forward_frame_2 - 0.49 10.5 17.9 0.14 12.2 4.3 2.6 2 1 1 3 3 3 0 Bacterial PH domain DotA PF11388.8 NODE_36749_length_582_cov_221.550274_g29569_i0reverse_frame_3 - 0.051 13.8 0.1 0.085 13.1 0.1 1.3 1 0 0 1 1 1 0 Phagosome trafficking protein DotA Peptidase_M48_N PF16491.5 NODE_36749_length_582_cov_221.550274_g29569_i0reverse_frame_3 - 0.088 12.7 2.0 0.12 12.3 2.0 1.2 1 0 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices HATPase_c PF02518.26 NODE_36749_length_582_cov_221.550274_g29569_i0forward_frame_3 - 0.028 14.9 0.0 0.045 14.3 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAP_N PF01213.19 ORF98954 - 5.6 6.4 5.9 8.2 5.8 5.9 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Peptidase_M15 PF01427.17 ORF97097 - 1.1e-81 273.4 0.0 1.5e-81 272.9 0.0 1.2 1 0 0 1 1 1 1 D-ala-D-ala dipeptidase VanY PF02557.17 ORF97097 - 4.2e-07 29.8 0.5 8.7e-07 28.8 0.5 1.6 1 1 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Peptidase_M15_4 PF13539.6 ORF97097 - 0.053 14.0 0.1 0.1 13.1 0.1 1.6 1 1 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase zf_C2H2_6 PF18450.1 ORF96494 - 0.64 9.8 0.1 0.64 9.8 0.1 3.8 5 0 0 5 5 5 0 Zinc Finger domain zf_C2H2_6 PF18450.1 ORF96493 - 0.64 9.8 0.1 0.64 9.8 0.1 3.8 5 0 0 5 5 5 0 Zinc Finger domain S1 PF00575.23 ORF96462 - 3.3e-10 40.2 0.1 3.2e-09 37.0 0.1 2.2 2 0 0 2 2 2 1 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF96462 - 0.39 10.7 2.2 1.8 8.6 1.3 2.6 1 1 1 2 2 2 0 RNase II-type exonuclease C-terminal S1 domain NUDE_C PF04880.13 ORF95896 - 0.0057 17.2 10.4 0.0077 16.7 10.4 1.2 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region Phlebovirus_G1 PF07243.11 ORF95896 - 0.0065 14.9 2.0 0.0083 14.6 2.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 DUF4538 PF15061.6 ORF95896 - 1.1 9.1 5.1 0.43 10.4 0.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF4140 PF13600.6 ORF95896 - 7.6 7.0 8.0 23 5.5 2.9 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) CAP_N PF01213.19 ORF95728 - 5.6 6.4 5.9 8.2 5.8 5.9 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Gcn1_N PF12074.8 ORF92778 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal TTL PF03133.15 ORF92388 - 2.7e-09 36.6 0.0 3.4e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF92388 - 1.2e-05 24.7 0.1 2.5e-05 23.7 0.1 1.7 1 1 0 1 1 1 1 YheC/D like ATP-grasp RimK PF08443.11 ORF92388 - 0.00013 21.6 0.0 0.0002 21.0 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATPgrasp_ST PF14397.6 ORF92388 - 0.017 14.4 0.0 0.024 13.9 0.0 1.1 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF92388 - 0.14 11.6 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus Gcn1_N PF12074.8 ORF91979 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Kelch_1 PF01344.25 ORF91905 - 0.00025 20.6 1.7 0.0087 15.6 0.4 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF91905 - 0.0012 19.1 0.4 0.87 10.0 0.2 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF91905 - 0.023 14.7 2.6 0.27 11.3 0.5 2.2 2 0 0 2 2 2 0 Kelch motif Orf78 PF06024.12 ORF91644 - 0.1 12.9 5.0 0.21 11.9 5.0 1.4 1 0 0 1 1 1 0 Orf78 (ac78) CS PF04969.16 ORF90429 - 1.2e-08 35.9 0.0 2.7e-08 34.7 0.0 1.6 2 0 0 2 2 2 1 CS domain IF3_C PF00707.22 ORF89795 - 1.3e-09 37.9 0.5 2.3e-09 37.1 0.5 1.5 1 1 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain Type_III_YscX PF09474.10 ORF89795 - 0.0076 16.5 0.2 1.1 9.6 0.1 2.2 1 1 1 2 2 2 2 Type III secretion system YscX (type_III_YscX) Cactin_mid PF10312.9 ORF89795 - 0.03 14.1 0.2 0.047 13.4 0.2 1.3 1 0 0 1 1 1 0 Conserved mid region of cactin Rad60-SLD PF11976.8 ORF82569 - 0.0013 18.5 0.1 0.0099 15.7 0.0 2.2 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like YukD PF08817.10 ORF82569 - 0.0024 18.5 0.0 0.0054 17.4 0.0 1.6 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD ubiquitin PF00240.23 ORF82569 - 0.021 14.6 0.0 0.047 13.4 0.0 1.6 1 0 0 1 1 1 0 Ubiquitin family TmoB PF06234.12 ORF82569 - 0.13 12.3 0.0 0.33 11.0 0.0 1.7 1 0 0 1 1 1 0 Toluene-4-monooxygenase system protein B (TmoB) RAWUL PF16207.5 ORF82569 - 0.2 12.4 0.0 0.42 11.3 0.0 1.5 1 0 0 1 1 1 0 RAWUL domain RING finger- and WD40-associated ubiquitin-like RFamide_26RFa PF11109.8 ORF82569 - 0.38 11.3 5.3 0.61 10.6 5.3 1.3 1 0 0 1 1 1 0 Orexigenic neuropeptide Qrfp/P518 ATP-synt_E PF05680.12 ORF82569 - 1.2 9.5 8.1 2.6 8.4 8.1 1.5 1 0 0 1 1 1 0 ATP synthase E chain MAJIN PF15077.6 ORF82569 - 6.2 6.5 6.4 8.8 6.0 6.4 1.1 1 0 0 1 1 1 0 Membrane-anchored junction protein DUF1661 PF07877.11 ORF80125 - 0.045 13.4 1.3 0.23 11.2 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1661) HPP PF04982.13 ORF78606 - 0.054 13.7 6.5 0.4 10.9 0.4 2.3 2 0 0 2 2 2 0 HPP family UPAR_LY6 PF00021.21 ORF78251 - 0.14 12.9 3.7 6 7.6 0.1 2.4 2 0 0 2 2 2 0 u-PAR/Ly-6 domain DPCD PF14913.6 ORF77893 - 0.12 11.7 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 DPCD protein family Gcn1_N PF12074.8 ORF77781 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Mer2 PF09074.10 ORF77032 - 0.053 13.3 0.3 0.95 9.2 0.1 2.1 1 1 1 2 2 2 0 Mer2 TFIIA PF03153.13 ORF76501 - 9.4e-06 25.9 23.7 0.00014 22.0 23.7 2.1 1 1 0 1 1 1 1 Transcription factor IIA, alpha/beta subunit SLAIN PF15301.6 ORF76501 - 0.18 11.0 0.5 0.22 10.7 0.5 1.2 1 0 0 1 1 1 0 SLAIN motif-containing family PBP1_TM PF14812.6 ORF76501 - 0.46 10.9 12.8 2.3 8.6 4.3 2.2 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal FAM176 PF14851.6 ORF76501 - 4.1 7.1 8.5 6.3 6.5 3.6 2.1 2 0 0 2 2 2 0 FAM176 family IBR PF01485.21 ORF75725 - 0.014 15.6 2.3 0.024 14.9 2.3 1.4 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Ribonuc_red_lgC PF02867.15 ORF75459 - 0.043 12.3 0.2 0.06 11.9 0.2 1.3 1 0 0 1 1 1 0 Ribonucleotide reductase, barrel domain LXG PF04740.12 ORF75459 - 0.087 12.5 5.7 0.035 13.8 3.0 1.7 2 0 0 2 2 2 0 LXG domain of WXG superfamily XhlA PF10779.9 ORF75459 - 4.6 7.5 5.8 5.8 7.2 1.4 2.5 2 1 0 2 2 2 0 Haemolysin XhlA DUF4844 PF16133.5 ORF74498 - 0.0073 16.9 0.7 0.015 15.9 0.3 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4844) PHD_2 PF13831.6 ORF74498 - 0.008 15.7 0.2 0.008 15.7 0.2 2.7 3 0 0 3 3 3 1 PHD-finger PHD PF00628.29 ORF74498 - 0.28 11.1 11.8 0.3 11.0 8.8 2.6 2 1 0 2 2 2 0 PHD-finger E1_UFD PF09358.10 ORF74498 - 0.33 11.7 2.2 0.61 10.8 0.1 2.3 1 1 1 2 2 2 0 Ubiquitin fold domain zf-B_box PF00643.24 ORF74498 - 0.63 10.2 15.6 0.22 11.7 12.2 1.9 2 0 0 2 2 2 0 B-box zinc finger ApoB100_C PF12491.8 ORF74498 - 2.6 8.1 10.4 6.1 6.9 0.9 3.1 2 1 1 3 3 3 0 Apolipoprotein B100 C terminal Kelch_1 PF01344.25 ORF73821 - 0.00025 20.6 1.7 0.0087 15.6 0.4 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF73821 - 0.0012 19.1 0.4 0.87 10.0 0.2 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF73821 - 0.023 14.7 2.6 0.27 11.3 0.5 2.2 2 0 0 2 2 2 0 Kelch motif zf-C2H2_assoc PF16606.5 ORF73064 - 0.32 11.2 5.1 0.091 13.0 1.7 1.8 2 0 0 2 2 2 0 Unstructured conserved, between two C2H2-type zinc-fingers DUF4551 PF15087.6 ORF71133 - 0.23 10.3 10.5 0.27 10.0 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) ORC6 PF05460.13 ORF71133 - 1.9 7.7 16.4 2.5 7.3 16.4 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Turandot PF07240.11 ORF70683 - 0.16 11.9 3.8 0.57 10.2 0.9 2.3 1 1 1 2 2 2 0 Stress-inducible humoral factor Turandot DUF4296 PF14129.6 ORF70683 - 0.46 11.1 8.5 5.3 7.7 2.4 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4296) Pro-NT_NN PF07421.11 ORF70683 - 2.6 8.3 11.2 0.1 12.9 1.4 2.1 1 1 1 2 2 2 0 Neurotensin/neuromedin N precursor Pkinase PF00069.25 ORF70400 - 2.3e-20 73.1 0.0 3.8e-20 72.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70400 - 1.7e-08 34.1 0.0 2.9e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF70400 - 5.8e-05 22.6 0.0 9.7e-05 21.8 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Mak16 PF04874.14 ORF70400 - 0.077 13.6 7.1 0.11 13.1 7.1 1.3 1 0 0 1 1 1 0 Mak16 protein C-terminal region SIR4_SID PF16991.5 ORF70400 - 0.59 10.2 6.6 0.98 9.4 6.6 1.3 1 0 0 1 1 1 0 Sir4 SID domain DUF640 PF04852.12 ORF69880 - 0.013 15.7 0.6 0.02 15.0 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF640) DAP10 PF07213.11 ORF69264 - 0.029 14.3 0.4 0.029 14.3 0.4 1.7 2 0 0 2 2 2 0 DAP10 membrane protein Ank_2 PF12796.7 ORF63748 - 1.4e-30 105.7 0.3 1.3e-18 67.4 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF63748 - 4.6e-25 87.6 0.1 2.4e-09 37.6 0.0 4.1 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF63748 - 1.8e-20 72.7 0.0 1.4e-06 28.5 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF63748 - 3.2e-18 63.9 0.0 4.9e-05 23.4 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF63748 - 7e-11 42.1 0.0 0.00039 20.7 0.0 3.8 4 0 0 4 4 4 2 Ankyrin repeat CRM1_repeat PF18777.1 ORF63624 - 0.27 10.8 0.3 0.27 10.8 0.3 1.6 2 0 0 2 2 2 0 Chromosome region maintenance or exportin repeat Jiraiya PF15038.6 ORF63469 - 0.0059 16.0 2.1 0.0069 15.8 2.1 1.3 1 0 0 1 1 1 1 Jiraiya ACP_PD PF04336.12 ORF63409 - 8.6e-29 100.0 2.6 1.3e-28 99.5 2.6 1.3 1 0 0 1 1 1 1 Acyl carrier protein phosphodiesterase Ank_2 PF12796.7 ORF63281 - 2.6e-33 114.4 7.8 1e-19 70.9 1.7 2.4 1 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF63281 - 9.5e-28 96.2 8.8 2e-09 37.8 0.1 4.0 2 1 3 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF63281 - 1.4e-21 76.2 7.6 4.2e-07 30.1 0.2 4.8 2 2 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF63281 - 6.1e-21 72.3 1.8 0.0023 18.3 0.0 5.7 6 0 0 6 6 6 5 Ankyrin repeat Ank PF00023.30 ORF63281 - 8.1e-21 73.5 11.3 3.5e-05 24.0 0.1 6.1 6 0 0 6 6 6 5 Ankyrin repeat EF-hand_1 PF00036.32 ORF63176 - 5.3e-28 94.5 6.1 8.6e-07 28.1 0.1 5.1 5 0 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF63176 - 5.8e-24 84.3 4.8 3.7e-12 46.5 0.5 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF63176 - 4.3e-22 76.1 3.4 3.2e-06 26.6 0.1 5.4 4 1 1 5 5 5 4 EF-hand domain EF-hand_8 PF13833.6 ORF63176 - 6.5e-21 73.9 7.7 8.4e-10 38.4 0.1 4.2 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF63176 - 3.3e-18 64.3 4.9 4.8e-05 22.7 0.2 4.9 5 0 0 5 5 5 4 EF hand SPARC_Ca_bdg PF10591.9 ORF63176 - 4.7e-08 33.3 3.1 2.6e-05 24.5 0.2 2.8 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF63176 - 9.1e-06 25.8 3.7 0.0061 16.7 0.6 3.7 2 1 1 3 3 3 2 Dockerin type I domain EF-hand_4 PF12763.7 ORF63176 - 5.3e-05 23.1 2.4 0.031 14.2 0.3 2.5 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF63176 - 0.015 15.1 2.2 10 6.1 0.0 3.9 3 1 1 4 4 4 0 EF hand DUF604 PF04646.12 ORF63176 - 0.027 13.9 0.0 0.036 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF604 SapB_1 PF05184.15 ORF63176 - 0.028 14.4 0.2 0.028 14.4 0.2 3.5 3 0 0 3 3 3 0 Saposin-like type B, region 1 DUF496 PF04363.12 ORF63176 - 0.65 10.1 4.9 0.71 9.9 1.5 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF496) Swi3 PF07962.12 ORF62733 - 5.9e-13 48.6 0.2 1e-12 47.9 0.2 1.3 1 0 0 1 1 1 1 Replication Fork Protection Component Swi3 DUF3619 PF12279.8 ORF62733 - 0.0043 17.4 1.9 0.0071 16.7 1.9 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3619) DUF1682 PF07946.14 ORF62733 - 6.9 5.8 8.6 9.6 5.3 8.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) MORN PF02493.20 ORF61786 - 2.5e-07 30.2 11.0 0.0015 18.3 1.8 3.6 3 0 0 3 3 3 2 MORN repeat QIL1 PF15884.5 ORF61786 - 0.0054 17.3 0.1 0.031 14.9 0.0 2.0 2 0 0 2 2 2 1 MICOS complex subunit MIC13, QIL1 Drf_GBD PF06371.13 ORF58561 - 0.0043 16.6 2.7 0.01 15.4 0.1 2.6 3 0 0 3 3 3 1 Diaphanous GTPase-binding Domain BAF250_C PF12031.8 ORF58561 - 0.0098 15.2 3.6 0.02 14.2 1.3 2.4 1 1 0 2 2 2 1 SWI/SNF-like complex subunit BAF250/Osa INTS5_C PF14838.6 ORF58561 - 0.03 13.0 2.1 0.029 13.0 1.2 1.3 1 1 0 1 1 1 0 Integrator complex subunit 5 C-terminus HEAT PF02985.22 ORF58561 - 0.038 14.2 1.7 0.17 12.2 0.2 2.8 3 0 0 3 3 3 0 HEAT repeat DUF3636 PF12331.8 ORF58561 - 0.046 13.5 0.2 0.081 12.8 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3636) Arm PF00514.23 ORF58561 - 0.22 11.6 3.0 15 5.8 0.1 3.2 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat STIMATE PF12400.8 ORF57149 - 4.1e-32 111.4 5.7 5.1e-32 111.0 5.7 1.1 1 0 0 1 1 1 1 STIMATE family SNARE PF05739.19 ORF5672 - 0.079 13.0 0.1 0.16 12.0 0.1 1.6 1 0 0 1 1 1 0 SNARE domain Serglycin PF04360.12 ORF5672 - 0.34 10.9 4.3 0.72 9.8 0.2 2.4 2 0 0 2 2 2 0 Serglycin TFIIA PF03153.13 ORF5672 - 7 6.5 12.2 8.7 6.2 12.2 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit EAL PF00563.20 ORF55556 - 5.5e-38 130.8 0.0 6.1e-38 130.7 0.0 1.0 1 0 0 1 1 1 1 EAL domain Hom_end PF05204.14 ORF55556 - 0.067 13.4 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Homing endonuclease Cullin PF00888.22 ORF55274 - 1.5e-39 136.1 7.6 1.7e-39 136.0 7.6 1.0 1 0 0 1 1 1 1 Cullin family Myc_target_1 PF15179.6 ORF54831 - 0.064 13.2 2.8 0.086 12.7 2.8 1.2 1 0 0 1 1 1 0 Myc target protein 1 Pkinase PF00069.25 ORF54217 - 2.4e-63 214.0 0.0 2.6e-63 213.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF54217 - 2.9e-32 112.0 0.0 3.2e-32 111.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF54217 - 2.7e-05 23.6 0.0 5e-05 22.8 0.0 1.3 1 1 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF54217 - 5.7e-05 22.2 0.1 6.8e-05 22.0 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF54217 - 0.0013 17.6 0.0 0.0019 17.1 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase YukC PF10140.9 ORF54217 - 0.0073 15.2 0.2 0.0083 15.0 0.2 1.1 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukC Kdo PF06293.14 ORF54217 - 0.058 12.7 0.0 0.089 12.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF54217 - 0.09 11.8 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 APH PF01636.23 ORF54217 - 0.15 11.9 0.0 0.43 10.5 0.0 1.7 2 1 0 2 2 2 0 Phosphotransferase enzyme family WD40 PF00400.32 ORF51951 - 2.3e-15 56.7 0.1 5.4e-06 27.0 0.0 4.0 4 0 0 4 4 4 3 WD domain, G-beta repeat FeoB_C PF07664.12 ORF51951 - 0.066 12.9 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Ferrous iron transport protein B C terminus UCH PF00443.29 ORF5182 - 6.5e-06 25.8 0.2 9.2e-06 25.3 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase GIIM PF08388.11 ORF5182 - 0.035 14.1 0.5 0.088 12.9 0.5 1.7 1 0 0 1 1 1 0 Group II intron, maturase-specific domain A_deaminase PF00962.22 ORF47819 - 1.1e-26 94.0 0.0 1.2e-26 93.8 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase DUF5021 PF16424.5 ORF47819 - 0.045 13.6 0.0 0.071 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5021) GATase PF00117.28 ORF45745 - 2.5e-57 193.8 0.0 2.7e-57 193.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF45745 - 1.1e-09 38.4 0.2 2.5e-09 37.2 0.2 1.5 1 1 0 1 1 1 1 Peptidase C26 Gcn1_N PF12074.8 ORF45721 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal ERGIC_N PF13850.6 ORF39938 - 4.6e-11 42.9 0.9 9.7e-11 41.9 0.3 1.9 2 0 0 2 2 2 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) COPIIcoated_ERV PF07970.12 ORF39938 - 0.09 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Endoplasmic reticulum vesicle transporter Ank_4 PF13637.6 ORF39305 - 8.7e-11 42.1 0.2 7.7e-06 26.4 0.1 2.3 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF39305 - 1.1e-08 35.1 0.3 2e-08 34.4 0.3 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF39305 - 9.1e-08 32.2 0.0 2.4e-07 30.9 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeat Ank_2 PF12796.7 ORF39305 - 1.2e-07 32.2 0.0 2.6e-07 31.1 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF39305 - 1.7e-05 24.8 0.1 7.9e-05 22.8 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat DiS_P_DiS PF06750.13 ORF39016 - 0.11 12.6 0.4 19 5.5 0.1 2.3 2 0 0 2 2 2 0 Bacterial Peptidase A24 N-terminal domain MORN PF02493.20 ORF38882 - 3.6e-23 80.0 20.8 1.4e-05 24.7 0.5 5.7 6 0 0 6 6 6 5 MORN repeat Sigma_reg_N PF13800.6 ORF38426 - 0.0095 16.2 1.6 0.028 14.7 1.6 1.8 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF3139 PF11337.8 ORF38426 - 0.031 14.9 0.6 0.031 14.9 0.6 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3139) Ninjurin PF04923.12 ORF38426 - 0.031 14.2 0.0 0.07 13.1 0.0 1.6 1 0 0 1 1 1 0 Ninjurin SK_channel PF03530.14 ORF38426 - 0.038 14.0 0.3 0.074 13.0 0.3 1.5 1 0 0 1 1 1 0 Calcium-activated SK potassium channel Tmemb_9 PF05434.11 ORF38426 - 0.046 13.6 0.0 0.079 12.9 0.0 1.3 1 0 0 1 1 1 0 TMEM9 CitMHS PF03600.16 ORF38426 - 0.17 11.1 0.2 0.2 10.8 0.2 1.2 1 0 0 1 1 1 0 Citrate transporter Sigma70_r4_2 PF08281.12 ORF35436 - 1.8e-19 69.2 0.2 4.9e-19 67.8 0.2 1.8 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 ORF35436 - 2.3e-18 65.7 0.2 4.7e-18 64.7 0.2 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 ORF35436 - 6.5e-11 41.6 0.0 1.6e-10 40.3 0.0 1.7 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 ORF35436 - 1.2e-08 35.1 0.1 3.9e-08 33.4 0.1 1.8 1 1 0 1 1 1 1 ECF sigma factor HTH_23 PF13384.6 ORF35436 - 0.00019 21.1 0.0 0.00054 19.7 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HTH_16 PF12645.7 ORF35436 - 0.081 13.0 0.0 0.25 11.4 0.0 1.9 2 1 0 2 2 2 0 Helix-turn-helix domain Gcn1_N PF12074.8 ORF35399 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal CBM_20 PF00686.19 ORF3241 - 3.6e-16 58.9 0.7 5.6e-16 58.2 0.7 1.3 1 0 0 1 1 1 1 Starch binding domain Lir1 PF07207.11 ORF31759 - 0.03 14.6 0.7 0.068 13.4 0.7 1.7 1 0 0 1 1 1 0 Light regulated protein Lir1 Gcn1_N PF12074.8 ORF31717 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Gcn1_N PF12074.8 ORF30213 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal DUF4762 PF15959.5 ORF28860 - 0.76 9.8 3.0 0.43 10.6 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4762) NUDIX PF00293.28 ORF27824 - 1.4e-19 70.4 0.0 1.9e-19 70.0 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Tyr-DNA_phospho PF06087.12 ORF27824 - 0.082 11.8 0.0 0.094 11.6 0.0 1.1 1 0 0 1 1 1 0 Tyrosyl-DNA phosphodiesterase ThiC_Rad_SAM PF01964.18 ORF27824 - 0.18 10.5 0.0 0.26 10.0 0.0 1.2 1 0 0 1 1 1 0 Radical SAM ThiC family Peptidase_C1 PF00112.23 ORF27593 - 1.3e-25 90.7 1.1 1.7e-25 90.4 1.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF27593 - 0.00095 19.0 0.0 0.0024 17.7 0.0 1.6 1 1 0 1 1 1 1 Peptidase family C1 propeptide Gcn1_N PF12074.8 ORF25300 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Abi_2 PF07751.11 ORF25018 - 0.053 13.8 0.1 0.073 13.3 0.1 1.2 1 0 0 1 1 1 0 Abi-like protein DnaJ PF00226.31 ORF23476 - 8.8e-08 32.2 1.0 1.1e-07 31.9 0.2 1.6 2 0 0 2 2 2 1 DnaJ domain Glyco_hydro_20 PF00728.22 ORF20682 - 2.2e-11 43.8 0.1 2.7e-11 43.5 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain FANCA_interact PF15751.5 ORF20092 - 0.044 14.3 0.2 0.086 13.3 0.2 1.4 1 0 0 1 1 1 0 FAAP20 FANCA interaction domain DUF2621 PF11084.8 ORF20036 - 0.1 12.6 0.1 0.24 11.4 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2621) GMP_PDE_delta PF05351.11 ORF19933 - 6.7e-57 191.9 0.7 8e-57 191.7 0.7 1.1 1 0 0 1 1 1 1 GMP-PDE, delta subunit DUF1374 PF07118.11 ORF19933 - 0.018 15.5 0.4 0.036 14.6 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1374) GASA PF02704.14 ORF19724 - 5.2 7.3 19.7 2 8.6 11.8 2.7 1 1 1 2 2 2 0 Gibberellin regulated protein RINGv PF12906.7 ORF1905 - 1.1 9.4 5.4 3.1 8.0 1.5 2.7 2 0 0 2 2 2 0 RING-variant domain NUDE_C PF04880.13 ORF152767 - 0.0057 17.2 10.4 0.0077 16.7 10.4 1.2 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region Phlebovirus_G1 PF07243.11 ORF152767 - 0.0065 14.9 2.0 0.0083 14.6 2.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 DUF4538 PF15061.6 ORF152767 - 1.1 9.1 5.1 0.43 10.4 0.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF4140 PF13600.6 ORF152767 - 7.6 7.0 8.0 23 5.5 2.9 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Galactosyl_T PF01762.21 ORF151906 - 0.00044 20.1 0.0 0.0006 19.7 0.0 1.1 1 0 0 1 1 1 1 Galactosyltransferase DUF1244 PF06844.11 ORF151906 - 0.071 13.3 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1244) EPO_TPO PF00758.18 ORF151055 - 0.066 13.3 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Erythropoietin/thrombopoietin Hydrolase_4 PF12146.8 ORF148746 - 0.053 12.8 0.0 0.069 12.4 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Acid_PPase PF12689.7 ORF147631 - 5.4e-44 150.0 0.0 6.4e-44 149.8 0.0 1.0 1 0 0 1 1 1 1 Acid Phosphatase NIF PF03031.18 ORF147631 - 0.13 12.0 0.0 0.21 11.3 0.0 1.3 1 1 0 1 1 1 0 NLI interacting factor-like phosphatase Gcn1_N PF12074.8 ORF147086 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal DUF3685 PF12452.8 ORF145707 - 0.043 13.5 0.7 0.27 10.9 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3685) Taxilin PF09728.9 ORF145707 - 0.17 11.0 23.4 0.014 14.6 12.0 2.2 2 0 0 2 2 2 0 Myosin-like coiled-coil protein DUF4358 PF14270.6 ORF145707 - 1.5 9.2 5.1 6.7 7.1 0.2 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4358) Gcn1_N PF12074.8 ORF145490 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Gcn1_N PF12074.8 ORF144937 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal CAP_N PF01213.19 ORF144690 - 5.6 6.4 5.9 8.2 5.8 5.9 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Glyco_transf_90 PF05686.12 ORF142869 - 5.9e-19 68.2 0.0 1.7e-18 66.8 0.0 1.4 1 1 1 2 2 2 1 Glycosyl transferase family 90 Glyco_trans_1_2 PF13524.6 ORF142869 - 4.9e-05 23.7 0.0 0.00015 22.1 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Rad51 PF08423.11 ORF140636 - 8.7e-15 54.7 0.0 1e-14 54.4 0.0 1.1 1 0 0 1 1 1 1 Rad51 Phi-29_GP16_7 PF06720.11 ORF138033 - 0.051 13.4 0.5 0.087 12.7 0.1 1.6 2 0 0 2 2 2 0 Bacteriophage phi-29 early protein GP16.7 Gcn1_N PF12074.8 ORF135146 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal SPC25 PF06703.11 ORF131766 - 1.6e-20 73.5 1.8 1.9e-20 73.3 1.8 1.1 1 0 0 1 1 1 1 Microsomal signal peptidase 25 kDa subunit (SPC25) TGBp3 PF02495.17 ORF131766 - 0.11 12.1 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Triple gene block 3 Sugar_tr PF00083.24 ORF131058 - 7.3e-05 21.8 5.0 8.6e-05 21.6 5.0 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter Gcn1_N PF12074.8 ORF130443 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal zf-LITAF-like PF10601.9 ORF128397 - 1.5e-16 60.4 15.5 2.1e-16 59.9 15.5 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Bul1_C PF04426.12 ORF127260 - 0.079 12.4 0.1 0.13 11.7 0.1 1.3 1 0 0 1 1 1 0 Bul1 C terminus DUF3079 PF11278.8 ORF127260 - 0.31 10.9 1.9 0.41 10.5 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3079) Ank_2 PF12796.7 ORF127161 - 3.6e-09 37.1 0.0 1.9e-08 34.8 0.0 1.9 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF127161 - 4.5e-07 30.0 0.1 0.021 15.3 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF127161 - 1.4e-05 25.5 0.2 0.04 14.5 0.1 3.4 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF127161 - 0.00024 21.3 0.4 1.8 9.4 0.0 3.2 3 1 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF127161 - 0.004 17.4 0.2 0.016 15.5 0.1 2.0 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Pkinase PF00069.25 ORF126549 - 2.4e-63 214.0 0.0 2.6e-63 213.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF126549 - 2.9e-32 112.0 0.0 3.2e-32 111.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF126549 - 2.7e-05 23.6 0.0 5e-05 22.8 0.0 1.3 1 1 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF126549 - 5.7e-05 22.2 0.1 6.8e-05 22.0 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF126549 - 0.0013 17.6 0.0 0.0019 17.1 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase YukC PF10140.9 ORF126549 - 0.0073 15.2 0.2 0.0083 15.0 0.2 1.1 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukC Kdo PF06293.14 ORF126549 - 0.058 12.7 0.0 0.089 12.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF126549 - 0.09 11.8 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 APH PF01636.23 ORF126549 - 0.15 11.9 0.0 0.43 10.5 0.0 1.7 2 1 0 2 2 2 0 Phosphotransferase enzyme family Gcn1_N PF12074.8 ORF126504 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal RRM_1 PF00076.22 ORF123800 - 2.7e-09 36.7 0.0 4.7e-09 35.9 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF123800 - 0.16 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif Gcn1_N PF12074.8 ORF121238 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal DUF35_N PF12172.8 ORF120699 - 0.011 15.6 1.0 0.077 12.9 0.2 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) PPTA PF01239.22 ORF117489 - 0.18 11.6 0.2 4.8 7.1 0.1 2.6 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat DUF2380 PF09533.10 ORF116422 - 0.074 12.7 1.7 0.16 11.6 1.7 1.5 1 1 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) Nitroreductase PF00881.24 ORF116422 - 0.087 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Nitroreductase family ODV-E18 PF10717.9 ORF115913 - 0.025 14.5 0.0 0.057 13.3 0.0 1.7 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 AbfS_sensor PF18225.1 ORF11453 - 0.14 12.1 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain zf-C2HE PF16278.5 ORF11429 - 0.075 13.5 0.0 0.17 12.4 0.0 1.5 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger DUF4762 PF15959.5 ORF113882 - 0.76 9.8 3.0 0.43 10.6 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4762) MORN PF02493.20 ORF112948 - 3.6e-23 80.0 20.8 1.4e-05 24.7 0.5 5.7 6 0 0 6 6 6 5 MORN repeat DUF1661 PF07877.11 ORF112763 - 0.045 13.4 1.3 0.23 11.2 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1661) DUF4551 PF15087.6 ORF111459 - 0.23 10.3 10.5 0.27 10.0 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) ORC6 PF05460.13 ORF111459 - 1.9 7.7 16.4 2.5 7.3 16.4 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) tRNA-synt_1 PF00133.22 ORF111345 - 5.2e-14 51.4 0.0 6.4e-14 51.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 ORF111345 - 1.4e-09 37.3 0.1 2.2e-09 36.6 0.0 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (M) Abi_2 PF07751.11 ORF109236 - 0.053 13.8 0.1 0.073 13.3 0.1 1.2 1 0 0 1 1 1 0 Abi-like protein NUDE_C PF04880.13 ORF107529 - 0.0057 17.2 10.4 0.0077 16.7 10.4 1.2 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region Phlebovirus_G1 PF07243.11 ORF107529 - 0.0065 14.9 2.0 0.0083 14.6 2.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 DUF4538 PF15061.6 ORF107529 - 1.1 9.1 5.1 0.43 10.4 0.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF4140 PF13600.6 ORF107529 - 7.6 7.0 8.0 23 5.5 2.9 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) TSC21 PF15217.6 ORF107099 - 0.088 12.7 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 TSC21 family Gcn1_N PF12074.8 ORF106870 - 0.063 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal CRM1_repeat PF18777.1 ORF106849 - 0.27 10.8 0.3 0.27 10.8 0.3 1.6 2 0 0 2 2 2 0 Chromosome region maintenance or exportin repeat FANCA_interact PF15751.5 ORF104713 - 0.13 12.7 6.2 0.071 13.6 4.1 1.7 1 1 1 2 2 2 0 FAAP20 FANCA interaction domain ABC_tran PF00005.27 ORF102582 - 1.9e-11 44.7 0.0 2.2e-11 44.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF102582 - 0.094 12.5 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 ORF102582 - 0.23 10.9 0.0 0.33 10.4 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain DUF4762 PF15959.5 ORF102301 - 0.76 9.8 3.0 0.43 10.6 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4762) TauE PF01925.19 ORF101632 - 2.3e-09 37.3 6.5 3.1e-09 36.8 6.5 1.2 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF5549 PF17703.1 NODE_37186_length_574_cov_2.122449_g29965_i0reverse_frame_1 - 0.037 13.7 0.1 0.047 13.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) MetOD2 PF18548.1 NODE_37171_length_574_cov_46.194805_g29950_i0reverse_frame_1 - 0.013 15.6 8.5 0.013 15.6 8.5 2.3 1 1 1 2 2 2 0 Metanogen output domain 2 Lipoprotein_7 PF01540.16 NODE_37171_length_574_cov_46.194805_g29950_i0reverse_frame_1 - 0.12 11.7 23.7 0.17 11.2 23.7 1.3 1 1 0 1 1 1 0 Adhesin lipoprotein Inos-1-P_synth PF01658.17 NODE_37169_length_574_cov_60.519481_g21777_i1reverse_frame_1 - 1.9 8.8 0.0 1.9 8.8 0.0 2.9 2 1 1 3 3 3 0 Myo-inositol-1-phosphate synthase MTA_R1 PF17226.2 NODE_37155_length_574_cov_96.072356_g29936_i0reverse_frame_1 - 0.058 13.5 0.7 0.24 11.6 0.7 2.0 1 1 0 1 1 1 0 MTA R1 domain TPR_6 PF13174.6 NODE_37150_length_574_cov_137.471243_g29931_i0reverse_frame_1 - 0.037 14.6 0.3 2.5 8.9 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_37150_length_574_cov_137.471243_g29931_i0reverse_frame_1 - 0.046 14.0 0.0 0.11 12.8 0.0 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF2897 PF11446.8 NODE_37147_length_574_cov_162.651206_g2903_i3reverse_frame_1 - 0.011 15.6 1.3 0.02 14.8 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) IU_nuc_hydro PF01156.19 NODE_37102_length_575_cov_143.274074_g29888_i0reverse_frame_1 - 4.9e-25 88.7 0.0 5.9e-25 88.5 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase UreD PF01774.17 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_1 - 0.42 10.5 1.5 11 5.9 0.0 2.6 3 1 0 3 3 3 0 UreD urease accessory protein JSRP PF15312.6 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_1 - 7.6 6.5 13.5 9.1 6.3 0.1 4.3 3 1 2 5 5 5 0 Junctional sarcoplasmic reticulum protein Pyridoxal_deC PF00282.19 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_1 - 0.0049 15.6 10.2 1.6 7.4 0.1 3.9 4 0 0 4 4 4 4 Pyridoxal-dependent decarboxylase conserved domain SHIPPO-rpt PF07004.12 NODE_37080_length_576_cov_2.922366_g29867_i0forward_frame_1 - 5.2 8.2 7.0 6.2 7.9 0.7 2.5 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat DUF2817 PF10994.8 NODE_37075_length_576_cov_4.842884_g29862_i0forward_frame_1 - 0.0019 17.7 0.9 0.0025 17.3 0.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2817) DUF769 PF05590.11 NODE_37075_length_576_cov_4.842884_g29862_i0forward_frame_1 - 0.0066 15.9 1.7 0.0082 15.6 1.7 1.1 1 0 0 1 1 1 1 Xylella fastidiosa protein of unknown function (DUF769) zf-C2HE PF16278.5 NODE_37073_length_576_cov_12.659889_g29860_i0reverse_frame_1 - 3.3 8.2 10.2 8.6 6.9 0.2 2.6 2 1 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger ESP PF16590.5 NODE_37038_length_576_cov_6032.057301_g19647_i5forward_frame_1 - 0.026 14.8 0.0 0.036 14.3 0.0 1.3 1 0 0 1 1 1 0 Exocrine gland-secreting peptide Cas_Cas4 PF01930.17 NODE_37028_length_577_cov_9.470480_g29820_i0reverse_frame_2 - 0.00073 19.7 1.3 0.0012 18.9 1.3 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF83 Bowman-Birk_leg PF00228.20 NODE_37027_length_577_cov_11.619926_g29819_i0forward_frame_3 - 0.48 10.9 0.2 0.48 10.9 0.2 1.9 2 0 0 2 2 2 0 Bowman-Birk serine protease inhibitor family TPR_15 PF13429.6 NODE_37022_length_577_cov_89.103321_g29815_i0reverse_frame_2 - 0.0018 17.5 0.2 0.0039 16.5 0.1 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat zf-LITAF-like PF10601.9 NODE_37022_length_577_cov_89.103321_g29815_i0forward_frame_2 - 0.066 13.5 6.6 0.066 13.5 6.6 2.7 2 1 1 3 3 3 0 LITAF-like zinc ribbon domain FAM183 PF14886.6 NODE_36989_length_577_cov_892.404059_g29786_i0reverse_frame_2 - 0.019 15.6 0.4 0.058 14.1 0.0 1.8 2 0 0 2 2 2 0 FAM183A and FAM183B related zf-C4 PF00105.18 NODE_36978_length_578_cov_5.364641_g26729_i1reverse_frame_2 - 0.018 15.5 2.3 0.04 14.4 2.3 1.5 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) DUF3934 PF13070.6 NODE_36959_length_578_cov_151.156538_g29760_i0forward_frame_3 - 0.99 9.9 7.7 4.4 7.8 1.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3934) 2OG-FeII_Oxy_3 PF13640.6 NODE_36956_length_578_cov_301.821363_g29757_i0forward_frame_3 - 5.5e-09 36.8 0.0 8.3e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-Fe_Oxy_2 PF10014.9 NODE_36956_length_578_cov_301.821363_g29757_i0forward_frame_3 - 0.041 13.7 0.0 0.056 13.2 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe dioxygenase Asp_Arg_Hydrox PF05118.15 NODE_36956_length_578_cov_301.821363_g29757_i0forward_frame_3 - 0.043 13.6 0.0 0.062 13.1 0.0 1.2 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase PhyH PF05721.13 NODE_36956_length_578_cov_301.821363_g29757_i0forward_frame_3 - 0.073 13.3 0.0 0.089 13.0 0.0 1.2 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) Cupin_2 PF07883.11 NODE_36956_length_578_cov_301.821363_g29757_i0forward_frame_3 - 0.16 11.7 0.0 0.26 11.0 0.0 1.3 1 0 0 1 1 1 0 Cupin domain zf-ANAPC11 PF12861.7 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_2 - 0.00027 20.9 3.1 0.00033 20.6 1.5 2.0 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger ATP11 PF06644.11 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_2 - 0.029 14.1 0.2 0.039 13.7 0.2 1.1 1 0 0 1 1 1 0 ATP11 protein zf-rbx1 PF12678.7 NODE_36950_length_578_cov_2246.346225_g29751_i0reverse_frame_2 - 0.034 14.4 2.0 0.11 12.7 2.0 1.9 1 0 0 1 1 1 0 RING-H2 zinc finger domain MCM_OB PF17207.3 NODE_36947_length_579_cov_1.446691_g29748_i0reverse_frame_3 - 0.093 12.6 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 MCM OB domain MCM_OB PF17207.3 NODE_36947_length_579_cov_1.446691_g29748_i0reverse_frame_2 - 3.5e-06 26.9 1.7 6.8e-05 22.7 0.0 2.4 2 1 0 2 2 2 2 MCM OB domain NtCtMGAM_N PF16863.5 NODE_36939_length_579_cov_42.944853_g29741_i0reverse_frame_3 - 0.073 13.3 0.6 0.13 12.5 0.5 1.5 1 1 0 1 1 1 0 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase Translin PF01997.16 NODE_36939_length_579_cov_42.944853_g29741_i0forward_frame_3 - 0.08 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Translin family KH_1 PF00013.29 NODE_36914_length_579_cov_202.330882_g29716_i0reverse_frame_2 - 0.15 11.9 0.0 0.33 10.8 0.0 1.5 1 0 0 1 1 1 0 KH domain Kelch_6 PF13964.6 NODE_36914_length_579_cov_202.330882_g29716_i0forward_frame_3 - 4.7e-06 26.7 0.0 1.9e-05 24.8 0.0 1.9 2 0 0 2 2 2 1 Kelch motif Kelch_1 PF01344.25 NODE_36914_length_579_cov_202.330882_g29716_i0forward_frame_3 - 3.3e-05 23.4 0.0 0.019 14.5 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_36914_length_579_cov_202.330882_g29716_i0forward_frame_3 - 0.00021 21.2 0.0 0.11 12.5 0.1 2.4 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_36914_length_579_cov_202.330882_g29716_i0forward_frame_3 - 0.0015 18.8 0.2 0.004 17.4 0.2 1.8 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_36914_length_579_cov_202.330882_g29716_i0forward_frame_3 - 0.0016 18.3 0.0 0.11 12.6 0.0 2.5 2 0 0 2 2 2 1 Kelch motif CFEM PF05730.11 NODE_36914_length_579_cov_202.330882_g29716_i0forward_frame_3 - 0.032 14.3 0.2 0.061 13.4 0.2 1.4 1 0 0 1 1 1 0 CFEM domain CbiQ PF02361.16 NODE_36907_length_579_cov_423.496324_g29710_i0forward_frame_3 - 0.072 12.7 0.2 0.1 12.2 0.2 1.1 1 0 0 1 1 1 0 Cobalt transport protein Flo11 PF10182.9 ORF99510 - 0.072 13.2 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Flo11 domain PDZ_6 PF17820.1 ORF97126 - 0.0087 15.9 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 PDZ domain LGT PF01790.18 ORF94083 - 9.3e-26 90.5 0.1 1e-25 90.4 0.1 1.0 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase PUB PF09409.10 ORF93964 - 1.7e-18 66.3 0.8 2.7e-18 65.7 0.8 1.5 1 1 0 1 1 1 1 PUB domain DUF365 PF04033.12 ORF93964 - 0.83 10.0 5.8 0.49 10.7 3.0 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF365) RPAP3_C PF13877.6 ORF92635 - 3.1e-08 34.0 0.8 1.1e-07 32.2 0.1 2.2 2 1 0 2 2 2 1 Potential Monad-binding region of RPAP3 DUF1993 PF09351.10 ORF92635 - 0.11 12.6 0.4 0.3 11.2 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1993) PH PF00169.29 ORF91210 - 6.2e-13 49.2 0.9 6.2e-13 49.2 0.9 1.5 2 0 0 2 2 2 1 PH domain PH_8 PF15409.6 ORF91210 - 0.0078 16.5 0.4 0.015 15.6 0.4 1.5 1 0 0 1 1 1 1 Pleckstrin homology domain PH_9 PF15410.6 ORF91210 - 0.13 12.7 3.1 1.1 9.7 3.1 2.3 1 1 0 1 1 1 0 Pleckstrin homology domain CSD PF00313.22 ORF88736 - 1e-11 44.5 0.0 1.6e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF88736 - 0.059 13.1 0.2 0.12 12.1 0.2 1.5 1 0 0 1 1 1 0 Ribonuclease B OB domain SF3b1 PF08920.10 ORF87380 - 0.054 14.0 0.0 0.079 13.5 0.0 1.4 1 1 0 1 1 1 0 Splicing factor 3B subunit 1 Cytochrome_CBB3 PF13442.6 ORF87226 - 9.4e-14 51.5 0.8 1.5e-12 47.6 0.8 2.2 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF87226 - 7.5e-08 33.4 0.1 1.3e-07 32.7 0.1 1.4 1 0 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF87226 - 0.00011 22.0 0.2 0.00032 20.4 0.2 1.9 1 1 0 1 1 1 1 Cytochrome c-550 domain CCG PF02754.16 ORF87226 - 0.077 13.2 0.2 0.13 12.4 0.2 1.4 1 0 0 1 1 1 0 Cysteine-rich domain DUF2613 PF11021.8 ORF87226 - 4.7 7.4 8.7 0.46 10.6 0.5 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) P_C10 PF14974.6 ORF87070 - 4.6e-05 23.5 0.0 6.8e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Protein C10 DUF4407 PF14362.6 ORF86772 - 3.1 7.1 5.1 20 4.4 0.1 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) FAM199X PF15814.5 ORF85977 - 0.15 11.1 3.3 0.24 10.4 3.3 1.2 1 0 0 1 1 1 0 Protein family FAM199X DUF3413 PF11893.8 ORF85105 - 0.01 15.0 1.4 0.015 14.5 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) Blt1_C PF17183.4 ORF85078 - 0.015 14.9 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 Get5 carboxyl domain Oxidored-like PF09791.9 ORF85078 - 0.027 14.1 5.0 0.062 13.0 5.0 1.6 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal Thioredoxin PF00085.20 ORF84547 - 5.1e-12 45.7 0.0 8.9e-12 44.9 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin DUF4381 PF14316.6 ORF84547 - 0.086 13.1 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Pup PF05639.11 ORF84547 - 0.9 10.5 4.6 1.6 9.7 4.6 1.3 1 0 0 1 1 1 0 Pup-like protein PLATZ PF04640.14 ORF84277 - 0.0079 16.8 0.7 0.91 10.2 0.1 2.6 2 0 0 2 2 2 2 PLATZ transcription factor Ribosomal_L38e PF01781.18 ORF84277 - 0.012 15.7 0.9 0.031 14.4 0.6 1.8 2 0 0 2 2 2 0 Ribosomal L38e protein family Choline_kin_N PF04428.14 ORF83410 - 0.086 12.5 0.2 0.11 12.2 0.2 1.4 1 1 0 1 1 1 0 Choline kinase N terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks123.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks123.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks123.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks123.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:00:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ISK_Channel PF02060.15 ORF82484 - 0.0027 17.4 0.0 0.0062 16.2 0.0 1.7 1 1 0 1 1 1 1 Slow voltage-gated potassium channel BatD PF13584.6 ORF82484 - 0.02 13.7 0.2 0.025 13.4 0.2 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF4448 PF14610.6 ORF82484 - 0.047 13.5 0.0 0.06 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) MCLC PF05934.11 ORF82484 - 0.1 11.3 1.0 0.14 10.9 1.0 1.1 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) TMEMspv1-c74-12 PF11044.8 ORF82484 - 0.12 12.4 0.8 0.32 11.0 0.8 1.7 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Presenilin PF01080.17 ORF82484 - 0.19 10.5 1.0 0.21 10.3 1.0 1.3 1 0 0 1 1 1 0 Presenilin OAD_gamma PF04277.13 ORF82484 - 0.33 11.6 2.8 7.6 7.2 0.0 3.0 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain LapA_dom PF06305.11 ORF82484 - 0.46 10.3 0.1 0.46 10.3 0.1 2.5 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain PDZ_6 PF17820.1 ORF78661 - 0.0087 15.9 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 PDZ domain Amidase_2 PF01510.25 ORF775 - 1.8e-26 93.1 0.0 2.1e-26 92.9 0.0 1.1 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase XRN1_D2_D3 PF18334.1 ORF74636 - 0.057 13.6 0.1 0.37 11.0 0.1 2.0 2 0 0 2 2 2 0 Exoribonuclease Xrn1 D2/D3 domain ODC_AZ PF02100.17 ORF74636 - 0.086 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme DM13 PF10517.9 ORF74636 - 0.097 13.3 0.2 0.69 10.5 0.1 2.0 2 0 0 2 2 2 0 Electron transfer DM13 FlhC PF05280.11 ORF74561 - 4.1e-82 274.1 0.1 4.7e-82 273.9 0.1 1.0 1 0 0 1 1 1 1 Flagellar transcriptional activator (FlhC) EF-hand_1 PF00036.32 ORF70721 - 7.1e-21 72.2 10.9 5.1e-05 22.5 0.1 4.6 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF70721 - 6.2e-18 63.1 12.2 1.1e-05 24.9 0.1 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF70721 - 1.5e-16 60.6 9.9 6.4e-08 32.9 0.6 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF70721 - 2.5e-15 55.1 9.7 0.001 18.4 0.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF70721 - 1.6e-08 34.3 15.1 2.9e-07 30.2 0.5 4.1 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF70721 - 0.00025 21.3 0.3 0.55 10.6 0.0 2.8 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF70721 - 0.033 14.4 3.0 9.2 6.5 1.4 3.2 2 1 1 3 3 3 0 Dockerin type I domain EF-hand_4 PF12763.7 ORF70721 - 0.074 13.0 1.5 0.18 11.8 0.5 2.1 2 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF70721 - 1.2 9.1 5.9 28 4.6 0.0 3.7 2 1 2 4 4 4 0 Caleosin related protein PDZ_6 PF17820.1 ORF6827 - 0.0087 15.9 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 PDZ domain MORN PF02493.20 ORF66014 - 1.6e-13 49.6 11.9 6.1e-07 29.0 1.7 3.0 3 0 0 3 3 3 2 MORN repeat 2Fe-2S_Ferredox PF11591.8 ORF62845 - 0.053 13.4 0.9 0.053 13.4 0.9 2.5 2 1 0 2 2 2 0 Ferredoxin chloroplastic transit peptide UvrA_DNA-bind PF17755.1 ORF62761 - 0.016 15.5 0.4 0.027 14.8 0.4 1.4 1 0 0 1 1 1 0 UvrA DNA-binding domain HALZ PF02183.18 ORF62761 - 0.31 11.3 2.0 1.4 9.2 0.6 2.4 2 0 0 2 2 2 0 Homeobox associated leucine zipper Csm1_N PF18504.1 ORF62761 - 0.35 11.2 9.1 0.38 11.1 1.2 2.9 1 1 1 2 2 2 0 Csm1 N-terminal domain bZIP_1 PF00170.21 ORF62761 - 0.47 10.6 6.9 0.17 12.0 1.9 2.7 1 1 0 2 2 2 0 bZIP transcription factor LMBR1 PF04791.16 ORF62761 - 1.6 7.5 8.7 1.8 7.4 8.7 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2680 PF10925.8 ORF62761 - 9.6 6.3 10.1 9.4 6.3 0.5 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) Aldo_ket_red PF00248.21 ORF61119 - 6.6e-16 58.4 0.0 7.6e-16 58.2 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family CbiK PF06180.11 ORF61046 - 0.0094 15.3 0.2 0.043 13.1 0.1 1.8 2 0 0 2 2 2 1 Cobalt chelatase (CbiK) NAD_binding_6 PF08030.12 ORF61046 - 0.057 13.5 0.1 0.078 13.1 0.1 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain VHP PF02209.19 ORF59603 - 1.4e-15 57.1 2.8 2.7e-15 56.1 2.8 1.5 1 0 0 1 1 1 1 Villin headpiece domain zf-RING_2 PF13639.6 ORF57000 - 4.9e-10 39.6 6.7 9.3e-10 38.7 6.7 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF57000 - 1.5e-07 31.0 4.7 3.9e-07 29.7 4.7 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF57000 - 7.7e-07 29.3 6.9 2.2e-06 27.9 6.9 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF57000 - 4.4e-06 26.4 6.8 8.1e-06 25.6 6.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF57000 - 7e-05 22.6 8.2 0.00014 21.7 8.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF57000 - 0.00013 21.8 3.8 0.00027 20.7 3.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF57000 - 0.00036 20.4 5.2 0.00067 19.6 5.2 1.5 1 0 0 1 1 1 1 zinc-RING finger domain FANCL_C PF11793.8 ORF57000 - 0.002 18.3 6.8 0.017 15.3 6.0 2.5 2 1 0 2 2 1 1 FANCL C-terminal domain zf-RING_UBOX PF13445.6 ORF57000 - 0.0028 17.6 8.5 0.0042 17.1 5.9 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3H2C3 PF17122.5 ORF57000 - 0.019 15.0 2.3 0.062 13.4 2.3 1.9 1 0 0 1 1 1 0 Zinc-finger Prok-RING_4 PF14447.6 ORF57000 - 0.027 14.3 5.4 0.047 13.5 5.4 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 C1_1 PF00130.22 ORF57000 - 0.054 13.4 4.7 0.31 10.9 4.1 2.4 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-ANAPC11 PF12861.7 ORF57000 - 0.13 12.4 6.7 0.14 12.3 3.8 2.4 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Baculo_RING PF05883.11 ORF57000 - 0.13 12.2 1.6 0.22 11.5 1.4 1.5 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain RINGv PF12906.7 ORF57000 - 0.34 11.1 6.1 0.77 9.9 6.1 1.6 1 0 0 1 1 1 0 RING-variant domain Zn_ribbon_17 PF17120.5 ORF57000 - 0.56 9.9 6.6 0.14 11.8 2.3 2.2 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type Pox_P21 PF05313.12 ORF57000 - 1.9 8.0 8.9 2.7 7.5 8.9 1.2 1 0 0 1 1 1 0 Poxvirus P21 membrane protein HlyD_3 PF13437.6 ORF55858 - 1.4e-10 41.8 0.1 8.5e-10 39.3 0.1 2.0 1 1 1 2 2 2 1 HlyD family secretion protein HlyD_D23 PF16576.5 ORF55858 - 2.9e-10 39.7 0.5 2.9e-09 36.4 0.1 2.1 2 0 0 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 ORF55858 - 1.5e-08 34.4 0.3 1.9e-08 34.1 0.3 1.3 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS ChapFlgA PF13144.6 ORF55858 - 0.059 13.4 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Chaperone for flagella basal body P-ring formation RPAP3_C PF13877.6 ORF5246 - 3.1e-08 34.0 0.8 1.1e-07 32.2 0.1 2.2 2 1 0 2 2 2 1 Potential Monad-binding region of RPAP3 DUF1993 PF09351.10 ORF5246 - 0.11 12.6 0.4 0.3 11.2 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1993) Paf1 PF03985.13 ORF52108 - 0.089 11.8 23.6 0.14 11.1 23.6 1.3 1 0 0 1 1 1 0 Paf1 Exonuc_VII_L PF02601.15 ORF52108 - 5 6.6 16.4 6.2 6.3 16.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit SOBP PF15279.6 ORF52108 - 5.2 7.6 13.5 6.4 7.3 13.5 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein CX9C PF16860.5 ORF51581 - 0.14 12.2 0.2 0.27 11.3 0.2 1.5 1 0 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Ribosomal_S19 PF00203.21 ORF51567 - 1e-25 89.4 0.5 1.6e-25 88.8 0.5 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Actin_micro PF17003.5 ORF49852 - 0.04 13.1 1.0 0.051 12.8 1.0 1.1 1 0 0 1 1 1 0 Putative actin-like family Phycoerythr_ab PF02972.14 ORF4914 - 0.011 15.5 0.1 0.019 14.7 0.1 1.4 1 0 0 1 1 1 0 Phycoerythrin, alpha/beta chain Sclerostin PF05463.11 ORF48957 - 0.029 14.1 12.2 0.04 13.6 12.2 1.2 1 0 0 1 1 1 0 Sclerostin (SOST) Gln-synt_C PF00120.24 ORF46496 - 2.6e-58 197.7 0.0 2.9e-58 197.5 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain DUF4407 PF14362.6 ORF45213 - 4.2 6.6 5.6 20 4.4 1.6 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Na_Ca_ex PF01699.24 ORF43099 - 1.9e-20 73.4 15.2 1.9e-20 73.4 15.2 1.4 2 0 0 2 2 2 1 Sodium/calcium exchanger protein Spp-24 PF07448.11 ORF41707 - 1.7 8.9 11.5 0.45 10.7 0.5 3.2 3 0 0 3 3 3 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain LSM PF01423.22 ORF402 - 3.2e-17 62.0 0.1 4e-17 61.7 0.1 1.1 1 0 0 1 1 1 1 LSM domain PX PF00787.24 ORF39797 - 6e-10 39.1 0.0 9.1e-10 38.5 0.0 1.3 1 0 0 1 1 1 1 PX domain E2F_TDP PF02319.20 ORF39739 - 1.3e-15 57.2 0.3 2.9e-15 56.0 0.3 1.6 1 0 0 1 1 1 1 E2F/DP family winged-helix DNA-binding domain CX9C PF16860.5 ORF38005 - 0.14 12.2 0.2 0.27 11.3 0.2 1.5 1 0 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Tim17 PF02466.19 ORF33968 - 0.00021 21.7 0.0 0.00031 21.1 0.0 1.4 1 1 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Imm48 PF15574.6 ORF33968 - 0.01 15.6 0.0 0.025 14.4 0.0 1.6 2 0 0 2 2 2 0 Immunity protein 48 CBAH PF02275.18 ORF33732 - 2.2e-20 73.5 0.0 2.6e-20 73.3 0.0 1.0 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family CMD PF02627.20 ORF33065 - 2.7e-08 33.8 0.1 1.6e-07 31.3 0.0 1.9 1 1 1 2 2 2 1 Carboxymuconolactone decarboxylase family Basic PF01586.16 ORF31074 - 0.089 14.0 0.5 0.38 12.0 0.5 2.0 1 0 0 1 1 1 0 Myogenic Basic domain Ribosomal_S14 PF00253.21 ORF30927 - 0.0011 18.7 9.9 0.99 9.2 0.2 4.4 4 0 0 4 4 4 3 Ribosomal protein S14p/S29e HXXEE PF13787.6 ORF30927 - 0.013 16.3 0.1 34 5.3 0.0 3.5 3 1 0 4 4 4 0 Protein of unknown function with HXXEE motif zf-TAZ PF02135.16 ORF30927 - 0.34 11.4 14.5 3 8.4 0.1 4.0 4 1 0 4 4 4 0 TAZ zinc finger GGACT PF06094.12 ORF28235 - 1.5e-10 41.8 0.0 2.3e-10 41.1 0.0 1.3 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 ORF28235 - 3.7e-05 24.0 0.2 0.00011 22.6 0.1 1.8 1 1 1 2 2 2 1 AIG2-like family 2Fe-2S_Ferredox PF11591.8 ORF28225 - 0.087 12.7 4.0 0.25 11.2 4.0 1.8 1 0 0 1 1 1 0 Ferredoxin chloroplastic transit peptide EF-hand_7 PF13499.6 ORF22514 - 0.12 12.8 0.2 0.35 11.4 0.0 1.8 2 1 0 2 2 2 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF22514 - 0.15 12.1 0.5 0.92 9.6 0.1 2.5 3 1 0 3 3 3 0 EF-hand domain IL28A PF15177.6 ORF151235 - 0.0047 16.8 0.3 0.039 13.8 0.1 2.1 1 1 1 2 2 2 1 Interleukin-28A PG_binding_4 PF12229.8 ORF151235 - 0.036 14.4 2.0 0.047 14.0 0.4 1.8 2 0 0 2 2 2 0 Putative peptidoglycan binding domain HIT PF01230.23 ORF151235 - 0.053 14.3 0.1 0.59 10.9 0.0 2.2 1 1 1 2 2 2 0 HIT domain TcdB_N PF12918.7 ORF151235 - 0.15 12.4 0.5 0.15 12.4 0.5 3.2 3 0 0 3 3 3 0 TcdB toxin N-terminal helical domain Plk4_PB2 PF18409.1 ORF151235 - 0.19 12.4 4.3 0.17 12.6 0.8 2.1 1 1 1 2 2 2 0 Polo-like Kinase 4 Polo Box 2 zf-DBF PF07535.12 ORF148752 - 0.0015 18.6 3.1 0.0015 18.6 3.1 1.9 2 0 0 2 2 2 1 DBF zinc finger ROS_MUCR PF05443.11 ORF148752 - 0.027 14.5 0.1 0.042 13.9 0.1 1.4 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein zf-C2H2_2 PF12756.7 ORF148752 - 0.032 14.6 1.9 0.065 13.6 1.9 1.6 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Epsilon_antitox PF08998.11 ORF148752 - 0.053 13.8 0.1 0.11 12.8 0.1 1.5 1 0 0 1 1 1 0 Bacterial epsilon antitoxin HECT PF00632.25 ORF139342 - 8.1e-68 229.2 0.3 8.9e-68 229.0 0.3 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) RHH_4 PF13467.6 ORF139342 - 0.041 13.8 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 Ribbon-helix-helix domain FAM183 PF14886.6 ORF138658 - 0.067 13.9 0.0 0.11 13.2 0.0 1.4 1 0 0 1 1 1 0 FAM183A and FAM183B related UL42 PF17638.2 ORF137432 - 2.3 8.2 9.6 0.63 10.0 4.1 2.4 2 1 0 2 2 2 0 HCMV UL42 Adenylsucc_synt PF00709.21 ORF136595 - 4.7e-51 174.0 0.0 5.1e-51 173.9 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase MOSC PF03473.17 ORF136444 - 4.1e-20 72.1 0.0 6.2e-20 71.6 0.0 1.2 1 0 0 1 1 1 1 MOSC domain 3-alpha PF03475.14 ORF136444 - 9.8e-15 54.2 0.1 2.3e-14 53.0 0.1 1.7 1 0 0 1 1 1 1 3-alpha domain Smr PF01713.21 ORF134452 - 1.9e-12 47.4 0.0 3.5e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 Smr domain BLOC1S3 PF15753.5 ORF134452 - 0.21 11.7 4.0 0.28 11.3 4.0 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 DUF3552 PF12072.8 ORF134452 - 0.59 9.5 11.7 0.75 9.2 11.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TCTP PF00838.17 ORF134452 - 6.6 7.1 9.9 7.7 6.8 8.1 1.8 1 1 1 2 2 2 0 Translationally controlled tumour protein XRN1_D2_D3 PF18334.1 ORF133453 - 0.057 13.6 0.1 0.37 11.0 0.1 2.0 2 0 0 2 2 2 0 Exoribonuclease Xrn1 D2/D3 domain ODC_AZ PF02100.17 ORF133453 - 0.086 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme DM13 PF10517.9 ORF133453 - 0.097 13.3 0.2 0.69 10.5 0.1 2.0 2 0 0 2 2 2 0 Electron transfer DM13 MazG PF03819.17 ORF131061 - 2.1e-14 53.5 7.6 7.1e-08 32.5 0.9 3.0 4 0 0 4 4 4 2 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 ORF131061 - 0.0018 18.6 1.4 0.0033 17.8 0.1 2.2 3 0 0 3 3 3 1 Phosphoribosyl-ATP pyrophosphohydrolase Ofd1_CTDD PF10637.9 ORF131061 - 0.011 15.1 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 0 Oxoglutarate and iron-dependent oxygenase degradation C-term SecA_SW PF07516.13 ORF131061 - 0.03 14.4 1.1 0.053 13.6 1.1 1.4 1 0 0 1 1 1 0 SecA Wing and Scaffold domain SKA2 PF16740.5 ORF131061 - 0.039 13.7 0.6 2 8.2 0.3 2.3 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 MazG-like PF12643.7 ORF131061 - 0.13 12.6 0.8 0.45 10.8 0.1 2.3 3 0 0 3 3 3 0 MazG-like family Cyt_bd_oxida_I PF01654.17 ORF129769 - 9.2e-39 133.2 6.0 1e-38 133.1 6.0 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I Pro_isomerase PF00160.21 ORF129587 - 5.9e-46 156.6 0.2 8.4e-46 156.1 0.2 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD zinc_ribbon_5 PF13719.6 ORF128271 - 0.06 13.1 0.1 0.1 12.4 0.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain RRM_1 PF00076.22 ORF126424 - 5.2e-09 35.8 0.3 9.2e-09 35.0 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF126424 - 0.014 15.0 0.0 0.021 14.4 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF126424 - 0.15 12.2 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif DHO_dh PF01180.21 ORF126233 - 4.1e-08 32.8 0.0 1.3e-05 24.6 0.0 2.0 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase PDZ_6 PF17820.1 ORF126043 - 0.0087 15.9 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 PDZ domain Tim17 PF02466.19 ORF122982 - 0.00021 21.7 0.0 0.00031 21.1 0.0 1.4 1 1 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Imm48 PF15574.6 ORF122982 - 0.01 15.6 0.0 0.025 14.4 0.0 1.6 2 0 0 2 2 2 0 Immunity protein 48 Nop16 PF09420.10 ORF12163 - 3.3e-11 43.6 15.5 1.4e-10 41.6 15.5 1.9 1 1 0 1 1 1 1 Ribosome biogenesis protein Nop16 Zea_mays_MuDR PF05928.11 ORF12163 - 0.014 15.0 1.9 0.03 13.9 0.1 2.1 2 0 0 2 2 2 0 Zea mays MURB-like protein (MuDR) TetR_C_1 PF02909.17 ORF121629 - 0.014 15.2 0.0 0.022 14.6 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain SET PF00856.28 ORF121543 - 0.011 16.1 0.0 0.039 14.4 0.0 1.8 2 0 0 2 2 2 0 SET domain RICTOR_M PF14666.6 ORF121543 - 0.04 13.7 0.0 0.063 13.0 0.0 1.3 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain zf-B_box PF00643.24 ORF119231 - 0.056 13.6 1.0 0.056 13.6 1.0 3.3 4 0 0 4 4 4 0 B-box zinc finger RLI PF04068.15 ORF119231 - 0.065 13.1 3.5 0.17 11.7 3.5 1.6 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI CHB_HEX_C PF03174.13 ORF116819 - 0.066 13.2 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Chitobiase/beta-hexosaminidase C-terminal domain DUF515 PF04415.12 ORF114696 - 6 5.1 6.6 11 4.3 6.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF515) DNA_pol_B_palm PF14792.6 ORF114395 - 2.3e-27 95.5 0.0 2.9e-27 95.1 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase beta palm DNA_pol_B_thumb PF14791.6 ORF114395 - 1.2e-17 63.8 0.0 2.1e-17 63.0 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase beta thumb NTP_transf_2 PF01909.23 ORF114395 - 0.012 15.9 0.1 0.025 14.9 0.0 1.6 2 0 0 2 2 2 0 Nucleotidyltransferase domain Kazal_1 PF00050.21 ORF114395 - 0.15 12.1 0.7 0.53 10.4 0.1 2.2 2 0 0 2 2 2 0 Kazal-type serine protease inhibitor domain Lipocalin_8 PF16585.5 ORF113476 - 0.099 13.1 0.2 0.16 12.4 0.2 1.3 1 0 0 1 1 1 0 Lipocalin-like domain Trypan_PARP PF05887.11 ORF110751 - 0.043 13.8 1.7 0.064 13.2 1.7 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Phi-29_GP16_7 PF06720.11 ORF110751 - 0.41 10.5 7.6 0.22 11.4 2.8 2.1 1 1 1 2 2 2 0 Bacteriophage phi-29 early protein GP16.7 CSD PF00313.22 ORF109762 - 1e-11 44.5 0.0 1.6e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF109762 - 0.059 13.1 0.2 0.12 12.1 0.2 1.5 1 0 0 1 1 1 0 Ribonuclease B OB domain HGAL PF15666.5 ORF108880 - 0.014 15.4 0.9 0.023 14.8 0.9 1.2 1 0 0 1 1 1 0 Germinal center-associated lymphoma Kelch_6 PF13964.6 ORF108530 - 0.0059 16.8 0.0 0.016 15.5 0.0 1.7 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 ORF108530 - 0.047 13.3 3.0 0.078 12.6 0.1 2.6 3 0 0 3 3 3 0 Kelch motif IMD PF08397.11 ORF107952 - 0.11 11.8 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 IRSp53/MIM homology domain PLDc_2 PF13091.6 ORF106620 - 0.17 11.8 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 PLD-like domain Basic PF01586.16 ORF104775 - 0.089 14.0 0.5 0.38 12.0 0.5 2.0 1 0 0 1 1 1 0 Myogenic Basic domain S1 PF00575.23 ORF1036 - 3e-24 85.2 0.1 1.2e-10 41.6 0.0 2.4 2 0 0 2 2 2 2 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF1036 - 3.7e-07 30.0 1.3 0.00022 21.1 0.1 2.8 3 0 0 3 3 3 2 RNase II-type exonuclease C-terminal S1 domain N6-adenineMlase PF10237.9 ORF103588 - 4e-40 137.3 3.7 4.6e-40 137.1 3.7 1.0 1 0 0 1 1 1 1 Probable N6-adenine methyltransferase Gcn1_N PF12074.8 ORF103493 - 0.065 12.5 0.0 0.088 12.1 0.0 1.1 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal Luciferase_cat PF10285.9 ORF103245 - 0.11 11.8 0.1 0.16 11.3 0.1 1.1 1 0 0 1 1 1 0 Luciferase catalytic domain KRTAP PF11759.8 ORF102343 - 9.9 6.8 24.5 30 5.2 1.5 3.1 2 1 0 2 2 2 0 Keratin-associated matrix DUF4105 PF13387.6 ORF101390 - 0.024 14.3 0.0 0.37 10.4 0.0 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4105) Pkinase PF00069.25 ORF101335 - 2.2e-20 73.1 0.0 2.5e-20 72.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101335 - 1.4e-09 37.6 0.0 1.5e-09 37.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF101335 - 3.8e-08 32.5 0.1 6.5e-08 31.8 0.1 1.4 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF101335 - 0.0003 20.8 0.0 0.0051 16.8 0.0 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF101335 - 0.029 13.7 0.1 0.036 13.4 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Lipocalin_8 PF16585.5 ORF101050 - 0.099 13.1 0.2 0.16 12.4 0.2 1.3 1 0 0 1 1 1 0 Lipocalin-like domain DUF3878 PF12994.7 NODE_37341_length_571_cov_2.738806_g30106_i0reverse_frame_1 - 0.067 12.6 0.0 0.08 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function, E. rectale Gene description (DUF3878) Mem_trans PF03547.18 NODE_37341_length_571_cov_2.738806_g30106_i0reverse_frame_1 - 0.17 10.3 0.5 0.21 9.9 0.5 1.1 1 0 0 1 1 1 0 Membrane transport protein DMT_YdcZ PF04657.13 NODE_37325_length_571_cov_94.514925_g30090_i0reverse_frame_1 - 4.7e-07 30.2 8.2 7.1e-07 29.6 8.2 1.2 1 0 0 1 1 1 1 Putative inner membrane exporter, YdcZ Glutaredoxin PF00462.24 NODE_37318_length_571_cov_117.729478_g30084_i0reverse_frame_1 - 5.4e-12 45.7 0.0 1.1e-11 44.8 0.0 1.5 1 0 0 1 1 1 1 Glutaredoxin GST_N_2 PF13409.6 NODE_37318_length_571_cov_117.729478_g30084_i0reverse_frame_1 - 0.046 14.0 0.0 0.087 13.1 0.0 1.6 1 1 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 NODE_37318_length_571_cov_117.729478_g30084_i0reverse_frame_1 - 0.05 14.0 0.4 0.088 13.2 0.0 1.7 2 0 0 2 2 2 0 Glutaredoxin-like domain (DUF836) zf-C3HC4_5 PF17121.5 NODE_37318_length_571_cov_117.729478_g30084_i0reverse_frame_1 - 0.31 10.9 3.0 16 5.5 0.3 2.8 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Isy1 PF06246.12 NODE_37308_length_571_cov_187.651119_g16335_i1forward_frame_1 - 2.5e-17 63.3 9.6 3.2e-17 62.9 9.6 1.1 1 0 0 1 1 1 1 Isy1-like splicing family COX16 PF14138.6 NODE_37308_length_571_cov_187.651119_g16335_i1forward_frame_1 - 0.69 10.5 5.8 2.6 8.6 5.6 2.2 1 1 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 Methyltransf_11 PF08241.12 NODE_37301_length_571_cov_265.561567_g30069_i0forward_frame_1 - 0.0041 17.7 0.0 0.0063 17.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_37301_length_571_cov_265.561567_g30069_i0forward_frame_1 - 0.011 16.4 0.0 0.018 15.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Retinal PF15449.6 NODE_37294_length_571_cov_606.264925_g30063_i0reverse_frame_1 - 0.7 7.6 10.4 0.87 7.3 10.4 1.0 1 0 0 1 1 1 0 Retinal protein zf-BED PF02892.15 NODE_37294_length_571_cov_606.264925_g30063_i0forward_frame_1 - 0.22 11.6 2.3 0.47 10.5 2.3 1.6 1 0 0 1 1 1 0 BED zinc finger TSA PF03249.13 NODE_37285_length_572_cov_3.126629_g30054_i0forward_frame_1 - 0.018 13.8 0.1 0.022 13.6 0.1 1.1 1 0 0 1 1 1 0 Type specific antigen RCC1_2 PF13540.6 NODE_37276_length_572_cov_87.059590_g30045_i0reverse_frame_1 - 1.4e-07 31.1 8.7 0.72 9.7 0.3 4.6 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 NODE_37276_length_572_cov_87.059590_g30045_i0reverse_frame_1 - 0.34 9.4 0.8 23 3.3 0.0 2.8 3 1 1 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase ABC_tran PF00005.27 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 2.2e-12 47.7 0.0 2.7e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter Dynamin_N PF00350.23 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.00023 21.2 0.0 0.00036 20.6 0.0 1.4 1 1 0 1 1 1 1 Dynamin family AAA_21 PF13304.6 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.00076 19.4 0.0 0.0012 18.7 0.0 1.3 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.0038 17.3 0.1 0.0059 16.7 0.1 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF87 PF01935.17 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.0095 16.0 0.4 0.017 15.2 0.1 1.5 2 0 0 2 2 2 1 Helicase HerA, central domain DUF815 PF05673.13 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.013 14.7 0.0 0.016 14.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_29 PF13555.6 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.015 15.0 0.1 0.029 14.1 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain FtsK_SpoIIIE PF01580.18 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.018 14.4 0.0 0.043 13.2 0.0 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family RsgA_GTPase PF03193.16 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.018 15.0 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase AAA_28 PF13521.6 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.054 13.7 0.0 0.069 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Roc PF08477.13 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 0.055 13.7 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_23 PF13476.6 NODE_37275_length_572_cov_87.162011_g30044_i0forward_frame_1 - 3.2 8.2 6.3 22 5.4 6.3 2.1 1 1 0 1 1 1 0 AAA domain zf-BED PF02892.15 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_1 - 0.061 13.4 1.2 0.061 13.4 1.2 2.0 2 0 0 2 2 2 0 BED zinc finger bPH_2 PF03703.14 NODE_37250_length_572_cov_540.657356_g30020_i0forward_frame_1 - 0.092 13.0 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial PH domain GAGA_bind PF06217.12 NODE_37249_length_572_cov_692.351955_g30019_i0reverse_frame_1 - 1 9.6 7.3 1.3 9.2 7.3 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Presenilin PF01080.17 NODE_37249_length_572_cov_692.351955_g30019_i0reverse_frame_1 - 1.4 7.6 9.3 1.5 7.5 9.3 1.0 1 0 0 1 1 1 0 Presenilin SRP-alpha_N PF04086.13 NODE_37249_length_572_cov_692.351955_g30019_i0reverse_frame_1 - 2.1 8.2 11.9 2.7 7.8 11.9 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal SAPS PF04499.15 NODE_37249_length_572_cov_692.351955_g30019_i0reverse_frame_1 - 4 6.1 6.2 4.6 5.9 6.2 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF1391 PF07151.12 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_1 - 4.8e-18 64.7 0.3 7.9e-18 64.0 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1391) DUF1327 PF07041.11 NODE_37236_length_573_cov_3.068773_g30007_i0forward_frame_1 - 2.1e-15 56.7 0.1 2.8e-15 56.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1327) ECSCR PF15820.5 NODE_37234_length_573_cov_3.176580_g30005_i0forward_frame_1 - 0.18 11.6 0.2 1 9.2 0.0 2.0 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator PHD_2 PF13831.6 NODE_37208_length_573_cov_178.546468_g29981_i0forward_frame_1 - 0.0031 17.1 1.1 0.0074 15.8 1.1 1.6 1 0 0 1 1 1 1 PHD-finger Yae1_N PF09811.9 NODE_37207_length_573_cov_181.868030_g29980_i0reverse_frame_1 - 2.7 7.8 6.7 0.12 12.1 1.0 1.7 2 0 0 2 2 2 0 Essential protein Yae1, N terminal RCC1_2 PF13540.6 NODE_37207_length_573_cov_181.868030_g29980_i0forward_frame_1 - 0.00053 19.7 3.5 0.13 12.1 0.1 3.2 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RR_TM4-6 PF06459.12 NODE_37207_length_573_cov_181.868030_g29980_i0forward_frame_1 - 0.36 10.6 9.9 0.41 10.4 9.9 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 RNA_polI_A34 PF08208.11 NODE_37207_length_573_cov_181.868030_g29980_i0forward_frame_1 - 4.4 7.3 25.7 6 6.9 25.7 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF3807 PF12720.7 NODE_37207_length_573_cov_181.868030_g29980_i0forward_frame_1 - 7.4 6.8 13.2 11 6.2 13.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) CtaG_Cox11 PF04442.14 NODE_37205_length_573_cov_193.953532_g29978_i0reverse_frame_1 - 7.8e-47 159.1 0.0 9.2e-47 158.9 0.0 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 NAD_synthase PF02540.17 NODE_37186_length_574_cov_2.122449_g29965_i0forward_frame_2 - 8.2e-20 70.9 0.0 9.9e-20 70.7 0.0 1.1 1 0 0 1 1 1 1 NAD synthase SBP_bac_3 PF00497.20 NODE_37181_length_574_cov_3.055659_g29960_i0forward_frame_3 - 4.8e-06 26.2 0.0 6.1e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Inositol_P PF00459.25 NODE_37181_length_574_cov_3.055659_g29960_i0forward_frame_3 - 0.062 12.8 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Inositol monophosphatase family Phosphonate-bd PF12974.7 NODE_37181_length_574_cov_3.055659_g29960_i0forward_frame_3 - 0.12 12.0 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein FtsH_ext PF06480.15 NODE_37169_length_574_cov_60.519481_g21777_i1reverse_frame_2 - 0.12 12.7 0.2 0.16 12.4 0.2 1.2 1 0 0 1 1 1 0 FtsH Extracellular cNMP_binding PF00027.29 NODE_37164_length_574_cov_86.335807_g29944_i0reverse_frame_3 - 1.4e-12 47.5 0.0 1.5e-05 25.0 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain zf-C2H2 PF00096.26 NODE_37164_length_574_cov_86.335807_g29944_i0reverse_frame_3 - 0.17 12.4 0.3 0.51 10.9 0.1 2.0 2 0 0 2 2 2 0 Zinc finger, C2H2 type Pex24p PF06398.11 NODE_37164_length_574_cov_86.335807_g29944_i0forward_frame_3 - 1.3 7.9 7.6 1.5 7.7 7.6 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Brix PF04427.18 NODE_37155_length_574_cov_96.072356_g29936_i0reverse_frame_3 - 0.0016 18.6 0.0 0.0031 17.6 0.0 1.5 1 0 0 1 1 1 1 Brix domain Presenilin PF01080.17 NODE_37155_length_574_cov_96.072356_g29936_i0reverse_frame_3 - 8.7 5.0 5.3 9.3 4.9 5.3 1.2 1 0 0 1 1 1 0 Presenilin DUF4234 PF14018.6 NODE_37141_length_574_cov_319.528757_g29924_i0reverse_frame_3 - 0.088 12.9 3.3 0.22 11.7 3.3 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4234) Cullin PF00888.22 NODE_37127_length_575_cov_2.416667_g29912_i0reverse_frame_2 - 4.5e-09 35.5 7.0 5e-09 35.3 7.0 1.0 1 0 0 1 1 1 1 Cullin family DUF1759 PF03564.15 NODE_37127_length_575_cov_2.416667_g29912_i0reverse_frame_2 - 0.032 14.2 1.1 0.12 12.3 0.2 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1759) TFIIA_gamma_N PF02268.16 NODE_37127_length_575_cov_2.416667_g29912_i0reverse_frame_2 - 0.079 13.0 0.1 0.23 11.5 0.1 1.8 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit, helical domain zf-C3HC PF07967.13 NODE_37127_length_575_cov_2.416667_g29912_i0reverse_frame_2 - 0.091 12.8 0.3 1.8 8.6 0.0 2.4 1 1 0 2 2 2 0 C3HC zinc finger-like DUF639 PF04842.12 NODE_37126_length_575_cov_2.733333_g29911_i0forward_frame_3 - 1.2 8.5 3.2 0.48 9.8 1.0 1.4 2 0 0 2 2 2 0 Plant protein of unknown function (DUF639) Poly_export PF02563.16 NODE_37124_length_575_cov_3.559259_g29909_i0forward_frame_2 - 8.9e-28 96.3 0.1 1.4e-27 95.7 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis/export protein SLBB PF10531.9 NODE_37124_length_575_cov_3.559259_g29909_i0forward_frame_2 - 4.6e-08 32.8 0.0 1.5e-07 31.1 0.0 1.9 2 0 0 2 2 2 1 SLBB domain Adeno_PVIII PF01310.18 NODE_37124_length_575_cov_3.559259_g29909_i0forward_frame_2 - 0.055 13.1 0.1 0.068 12.7 0.1 1.1 1 0 0 1 1 1 0 Adenovirus hexon associated protein, protein VIII Phage_holin_T PF11031.8 NODE_37122_length_575_cov_5.074074_g29907_i0forward_frame_3 - 0.005 16.3 1.0 0.005 16.3 1.0 1.4 2 0 0 2 2 2 1 Bacteriophage T holin PI-PLC-Y PF00387.19 NODE_37122_length_575_cov_5.074074_g29907_i0forward_frame_3 - 3.5 8.0 11.4 0.095 13.1 2.3 2.3 2 1 0 2 2 2 0 Phosphatidylinositol-specific phospholipase C, Y domain DUF2024 PF09630.10 NODE_37122_length_575_cov_5.074074_g29907_i0forward_frame_2 - 1.1 9.1 4.8 0.62 10.0 0.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF2024) NRDE-2 PF08424.10 NODE_37105_length_575_cov_107.542593_g29891_i0reverse_frame_3 - 0.042 13.0 0.6 0.058 12.5 0.6 1.1 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference Hfq PF17209.3 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 9.6e-06 25.2 0.2 21 4.9 0.0 4.7 5 0 0 5 5 5 3 Hfq protein YmgB PF10798.8 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.0068 16.2 0.3 31 4.5 0.0 3.9 4 0 0 4 4 4 0 Biofilm development protein YmgB/AriR COX14 PF14880.6 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.039 13.8 8.9 18 5.3 0.2 4.4 4 0 0 4 4 4 0 Cytochrome oxidase c assembly Transposase_20 PF02371.16 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.087 13.1 0.0 1.2e+02 3.0 0.0 3.7 4 0 0 4 4 4 0 Transposase IS116/IS110/IS902 family 4HPAD_g_N PF18671.1 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.1 12.4 1.7 1.7e+02 2.0 0.0 4.3 5 0 0 5 5 5 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal YtpI PF14007.6 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.14 12.4 1.9 75 3.6 0.0 3.4 3 0 0 3 3 3 0 YtpI-like protein Myotub-related PF06602.14 NODE_37091_length_575_cov_722.903704_g29877_i0reverse_frame_2 - 0.51 9.2 3.3 6.5 5.6 0.2 2.9 2 1 1 3 3 3 0 Myotubularin-like phosphatase domain UPRTase PF14681.6 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 6.2e-05 22.5 0.1 0.29 10.6 0.0 3.1 1 1 2 3 3 3 2 Uracil phosphoribosyltransferase Cyclin_C PF02984.19 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.00016 21.7 2.4 1.4 9.0 0.1 3.6 1 1 3 4 4 4 2 Cyclin, C-terminal domain Integrase_H2C2 PF17921.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.00093 19.3 4.0 5.6 7.2 0.0 4.0 4 0 0 4 4 4 2 Integrase zinc binding domain Ribosomal_S14 PF00253.21 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.00098 18.8 4.4 11 5.9 0.1 4.0 4 0 0 4 4 4 3 Ribosomal protein S14p/S29e FHA_2 PF17913.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.0061 16.8 0.0 8.3 6.7 0.0 2.9 2 1 1 3 3 3 2 FHA domain VEFS-Box PF09733.9 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.023 14.5 0.0 4.9 7.0 0.0 3.2 1 1 3 4 4 4 0 VEFS-Box of polycomb protein Kazal_1 PF00050.21 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.028 14.4 3.0 42 4.3 0.0 3.6 4 0 0 4 4 4 0 Kazal-type serine protease inhibitor domain VWA_N2 PF16164.5 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.1 12.7 2.6 35 4.6 0.1 3.8 3 1 1 4 4 4 0 VWA N-terminal Tom6 PF17112.5 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_3 - 0.85 9.2 12.2 9.6 5.8 0.1 4.2 4 0 0 4 4 4 0 Mitochondrial import receptor subunit Tom6, fungal RCC1_2 PF13540.6 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 1.7e-07 30.9 2.8 1.1 9.1 0.0 4.4 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 7.4e-06 26.4 0.0 15 6.1 0.0 4.5 5 0 0 5 5 5 0 Spectrin repeat AFP_2 PF18815.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.0004 20.6 2.2 15 5.9 0.0 4.6 2 2 3 5 5 5 0 Bacterial antifreeze protein repeat Ysc84 PF04366.12 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.00072 19.3 5.5 2 8.2 0.7 3.7 1 1 2 3 3 3 2 Las17-binding protein actin regulator DUF155 PF02582.14 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.0025 17.9 0.8 9.7 6.2 0.1 3.9 3 1 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Crystall PF00030.19 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.0033 17.6 0.9 0.78 10.0 0.1 2.6 1 1 1 3 3 3 1 Beta/Gamma crystallin Lipocalin_7 PF14651.6 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.027 14.4 1.6 0.58 10.1 0.1 2.3 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family PheRS_DBD2 PF18554.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.067 13.2 22.6 4.6 7.3 0.5 4.8 5 0 0 5 5 5 0 PheRS DNA binding domain 2 RNA_pol_Rpb1_2 PF00623.20 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.092 13.0 0.0 28 4.9 0.0 3.2 2 1 1 3 3 3 0 RNA polymerase Rpb1, domain 2 HEPN_Toprim_N PF18871.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.092 12.7 0.0 64 3.4 0.0 3.0 3 0 0 3 3 3 0 HEPN/Toprim N-terminal domain 1 Methyltransf_29 PF03141.16 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.13 10.8 0.1 13 4.2 0.0 3.3 4 0 0 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase UPF0180 PF03698.13 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.13 12.4 0.4 1.9e+02 2.3 0.0 4.0 4 0 0 4 4 4 0 Uncharacterised protein family (UPF0180) Tugs PF17840.1 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 0.24 11.6 6.5 1.2e+02 3.0 0.1 4.3 4 0 0 4 4 4 0 Tethering Ubl4a to BAGS domain Glyco_hydro_79C PF16862.5 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 4.6 8.2 8.7 31 5.5 0.4 3.3 1 1 3 4 4 4 0 Glycosyl hydrolase family 79 C-terminal beta domain Strep_SA_rep PF06696.11 NODE_37091_length_575_cov_722.903704_g29877_i0forward_frame_2 - 5.8 7.0 8.4 2e+02 2.2 0.0 4.6 5 0 0 5 5 5 0 Streptococcal surface antigen repeat PapD_N PF00345.20 NODE_37083_length_576_cov_2.375231_g29870_i0reverse_frame_2 - 4.5e-29 100.9 0.0 7.5e-29 100.2 0.0 1.3 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain zf-SAP30 PF13866.6 NODE_37076_length_576_cov_3.290203_g29863_i0forward_frame_3 - 1.1 9.4 6.1 0.13 12.4 1.3 1.9 2 0 0 2 2 2 0 SAP30 zinc-finger SHIPPO-rpt PF07004.12 NODE_37076_length_576_cov_3.290203_g29863_i0forward_frame_2 - 6.5e-08 33.1 43.5 0.0013 19.5 0.8 6.5 6 1 0 6 6 6 5 Sperm-tail PG-rich repeat YtkA PF13115.6 NODE_37076_length_576_cov_3.290203_g29863_i0forward_frame_2 - 0.048 14.3 0.1 12 6.6 0.1 2.5 2 0 0 2 2 2 0 YtkA-like CDC45 PF02724.14 NODE_37075_length_576_cov_4.842884_g29862_i0forward_frame_3 - 2.2 6.5 8.3 2.6 6.2 8.3 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF2374 PF09574.10 NODE_37067_length_576_cov_78.916821_g29856_i0reverse_frame_3 - 0.81 9.6 4.8 6.2 6.7 0.4 2.9 2 1 1 3 3 3 0 Protein of unknown function (Duf2374) NPCC PF08058.11 NODE_37062_length_576_cov_99.120148_g29851_i0forward_frame_2 - 0.028 14.5 0.6 0.14 12.2 0.0 2.1 1 1 1 2 2 2 0 Nuclear pore complex component zinc_ribbon_12 PF11331.8 NODE_37061_length_576_cov_107.571165_g29850_i0forward_frame_3 - 0.00076 19.2 0.4 0.0018 18.1 0.4 1.6 1 0 0 1 1 1 1 Probable zinc-ribbon domain RabGAP-TBC PF00566.18 NODE_37058_length_576_cov_123.031423_g29847_i0forward_frame_3 - 3e-14 53.2 0.0 4.5e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Csa1 PF06023.12 NODE_37047_length_576_cov_202.421442_g26795_i1forward_frame_3 - 0.12 11.7 0.2 0.16 11.3 0.2 1.1 1 0 0 1 1 1 0 CRISPR-associated exonuclease Csa1 Antimicrobial_2 PF08023.12 NODE_37047_length_576_cov_202.421442_g26795_i1forward_frame_3 - 0.79 10.3 9.5 1.3e+03 -0.0 9.5 3.3 1 1 0 1 1 1 0 Frog antimicrobial peptide Toxin_10 PF05431.11 NODE_37047_length_576_cov_202.421442_g26795_i1forward_frame_3 - 4.6 6.7 7.5 1.1e+02 2.2 7.5 2.2 1 1 0 1 1 1 0 Insecticidal Crystal Toxin, P42 APA3_viroporin PF11289.8 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_3 - 0.12 11.9 1.4 0.14 11.7 1.4 1.2 1 0 0 1 1 1 0 Coronavirus accessory protein 3a Pkinase PF00069.25 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 8.4e-37 127.0 0.2 9.9e-37 126.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 1.6e-25 89.9 0.1 1.9e-25 89.7 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 0.0008 18.5 0.4 0.00098 18.2 0.4 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 0.0076 15.6 0.1 0.01 15.2 0.1 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_37038_length_576_cov_6032.057301_g19647_i5reverse_frame_2 - 0.011 15.1 0.0 0.018 14.4 0.0 1.3 1 0 0 1 1 1 0 Kinase-like LcrG PF07216.12 ORF97379 - 0.082 12.8 1.7 0.11 12.4 0.6 1.8 1 1 0 1 1 1 0 LcrG protein Cation_efflux PF01545.21 ORF95227 - 0.048 13.4 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 Cation efflux family T6SS_VipA PF05591.12 ORF94636 - 0.29 10.9 3.5 0.17 11.7 0.4 2.0 2 1 0 2 2 2 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAP_fibrillin PF04755.12 ORF93671 - 5.1e-14 52.7 0.0 1e-13 51.7 0.0 1.5 1 1 0 1 1 1 1 PAP_fibrillin AA_permease_2 PF13520.6 ORF91128 - 1.1e-05 24.5 12.4 2e-05 23.6 12.4 1.4 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF91128 - 0.00016 20.4 10.3 0.00038 19.2 10.3 1.6 1 1 0 1 1 1 1 Amino acid permease Rab5ip PF07019.12 ORF91128 - 0.045 14.3 2.8 0.092 13.3 0.2 2.4 2 1 0 2 2 2 0 Rab5-interacting protein (Rab5ip) Lact-deh-memb PF09330.11 ORF89744 - 1.2e-40 139.7 0.0 1.3e-40 139.5 0.0 1.0 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding FAD-oxidase_C PF02913.19 ORF89744 - 0.00035 20.3 0.2 0.0034 17.1 0.2 2.1 1 1 0 1 1 1 1 FAD linked oxidases, C-terminal domain DNAP_B_exo_N PF08452.10 ORF89645 - 0.27 10.7 0.1 0.27 10.7 0.1 1.9 2 0 0 2 2 2 0 DNA polymerase family B exonuclease domain, N-terminal zf-RING_2 PF13639.6 ORF88911 - 3e-11 43.5 12.6 3e-11 43.5 12.6 1.7 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF88911 - 9.7e-10 38.6 7.7 2.5e-09 37.3 7.7 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF88911 - 4.2e-08 32.8 6.1 4.2e-08 32.8 6.1 2.0 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF88911 - 1.2e-07 31.5 8.1 2.8e-07 30.3 8.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF88911 - 1.9e-07 30.8 7.8 4.6e-07 29.6 7.8 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF88911 - 7.1e-06 25.9 11.7 7.1e-06 25.9 11.7 1.8 2 0 0 2 2 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF88911 - 2.6e-05 24.2 3.5 5e-05 23.3 3.5 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 ORF88911 - 0.0003 20.8 6.3 0.0006 19.9 6.3 1.5 1 0 0 1 1 1 1 RING-variant domain Prok-RING_1 PF14446.6 ORF88911 - 0.00094 19.1 2.7 0.00094 19.1 2.7 2.4 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-C3HC4_3 PF13920.6 ORF88911 - 0.0016 18.3 8.3 0.0033 17.3 8.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF88911 - 0.0017 18.5 7.3 0.0049 17.0 7.3 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF88911 - 0.0017 17.9 7.0 0.0035 16.9 7.0 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-Nse PF11789.8 ORF88911 - 0.0018 18.1 6.3 0.0048 16.7 6.3 1.7 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_4 PF14570.6 ORF88911 - 0.0019 17.9 9.4 0.0033 17.2 9.4 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-RING_5 PF14634.6 ORF88911 - 0.0026 17.7 10.4 0.005 16.8 10.4 1.5 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF88911 - 0.053 13.4 12.3 3.7 7.5 12.8 2.5 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 Rad50_zn_hook PF04423.14 ORF88911 - 0.11 12.4 5.1 0.96 9.3 0.4 2.7 2 1 0 2 2 2 0 Rad50 zinc hook motif Pns11_12 PF17464.2 ORF88911 - 0.13 12.0 1.9 0.25 11.0 1.9 1.4 1 0 0 1 1 1 0 Non-structural protein 11 and 12 zf-C3HC4_4 PF15227.6 ORF88911 - 0.17 12.1 8.0 0.2 11.9 6.4 2.0 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING zf-UDP PF14569.6 ORF88911 - 0.2 11.8 3.9 0.45 10.7 3.9 1.6 1 0 0 1 1 1 0 Zinc-binding RING-finger TatD_DNase PF01026.21 ORF86975 - 8.6e-49 166.2 0.0 9.5e-49 166.1 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase FMN_red PF03358.15 ORF83508 - 2.6e-34 118.2 0.0 3.4e-34 117.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 ORF83508 - 8.4e-07 28.9 0.0 1.7e-06 27.9 0.0 1.6 2 0 0 2 2 2 1 Flavodoxin-like fold Peptidase_M20 PF01546.28 ORF8330 - 3.9e-07 30.0 0.1 6e-07 29.4 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M42 PF05343.14 ORF8330 - 4.4e-05 22.6 0.0 5.9e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 ORF8330 - 0.0022 17.7 0.1 0.0042 16.8 0.1 1.5 2 0 0 2 2 2 1 Peptidase family M28 DUF3292 PF11696.8 ORF81437 - 0.099 11.0 7.4 0.12 10.7 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) CpxA_peri PF16527.5 ORF81437 - 0.1 13.0 4.0 0.17 12.3 4.0 1.4 1 0 0 1 1 1 0 Two-component sensor protein CpxA, periplasmic domain DUF2423 PF10338.9 ORF80725 - 0.02 15.1 1.0 0.02 15.1 1.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2423) ThuA PF06283.11 ORF80725 - 0.065 13.4 0.3 0.094 12.9 0.3 1.2 1 0 0 1 1 1 0 Trehalose utilisation PhrC_PhrF PF11131.8 ORF79457 - 0.017 14.7 0.0 0.038 13.6 0.0 1.6 1 0 0 1 1 1 0 Rap-phr extracellular signalling SUIM_assoc PF16619.5 ORF78128 - 0.022 14.8 0.5 0.022 14.8 0.5 2.2 2 0 0 2 2 2 0 Unstructured region C-term to UIM in Ataxin3 DUF4083 PF13314.6 ORF78128 - 0.055 13.4 0.3 1 9.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) Methyltransf_3 PF01596.17 ORF77264 - 0.011 14.9 0.0 0.016 14.4 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_24 PF13578.6 ORF77264 - 0.046 14.7 0.1 0.13 13.3 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain DUF2909 PF11137.8 ORF76911 - 0.083 12.8 3.5 0.18 11.7 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2909) Pro_isomerase PF00160.21 ORF76873 - 1.3e-47 162.0 0.1 1.5e-47 161.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RNase_H_2 PF13482.6 ORF76873 - 0.18 11.8 0.0 5.4 7.0 0.0 2.1 2 0 0 2 2 2 0 RNase_H superfamily DUF4154 PF13689.6 ORF76264 - 2.7e-29 102.3 0.0 3.1e-29 102.0 0.0 1.1 1 0 0 1 1 1 1 YfiR/HmsC-like PTN_MK_N PF05196.13 ORF74352 - 0.05 13.8 0.8 0.13 12.5 0.2 2.0 2 0 0 2 2 2 0 PTN/MK heparin-binding protein family, N-terminal domain EF-hand_1 PF00036.32 ORF73996 - 4.3e-12 44.7 2.1 2.5e-05 23.5 0.2 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF73996 - 8.8e-11 40.8 2.7 0.00017 21.3 0.1 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF73996 - 9.8e-11 42.0 0.0 1.9e-10 41.0 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF73996 - 5.2e-08 32.6 0.4 3.1e-05 23.7 0.0 2.5 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF73996 - 1.4e-07 30.7 0.8 0.00016 21.0 0.1 2.7 2 0 0 2 2 2 2 EF hand DUF507 PF04368.13 ORF73996 - 0.016 15.1 0.1 0.021 14.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF507) SPARC_Ca_bdg PF10591.9 ORF73996 - 0.031 14.6 1.6 1.4 9.2 1.6 2.3 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region p25-alpha PF05517.12 ORF73996 - 0.052 13.7 0.5 0.45 10.7 0.3 2.0 1 1 1 2 2 2 0 p25-alpha SUA5 PF03481.13 ORF73996 - 0.18 12.4 0.7 0.29 11.7 0.7 1.4 1 1 0 1 1 1 0 Putative GTP-binding controlling metal-binding TetR_C_19 PF17924.1 ORF73996 - 0.27 11.9 5.6 0.47 11.1 1.5 2.2 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF3330 PF11809.8 ORF72277 - 0.11 12.5 0.3 0.2 11.7 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3330) CAP PF00188.26 ORF72095 - 0.049 14.5 1.4 12 6.7 0.0 2.4 2 0 0 2 2 2 0 Cysteine-rich secretory protein family Pro_isomerase PF00160.21 ORF70781 - 5.2e-41 140.5 0.1 6.3e-41 140.3 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Putative_PNPOx PF01243.20 ORF68855 - 0.00031 20.9 0.0 0.00055 20.1 0.0 1.5 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase EF-hand_1 PF00036.32 ORF68543 - 0.00093 18.6 1.2 0.7 9.6 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF68543 - 0.0028 18.1 0.1 0.0049 17.3 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF68543 - 0.017 15.0 0.1 5.3 7.2 0.1 2.6 2 0 0 2 2 2 0 EF-hand domain TPR_2 PF07719.17 ORF68312 - 0.063 13.4 1.3 2.7 8.3 0.1 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat KIAA1430 PF13879.6 ORF68312 - 0.096 13.5 0.6 0.14 12.9 0.6 1.2 1 0 0 1 1 1 0 KIAA1430 homologue Got1 PF04178.12 ORF67800 - 5.1e-27 94.5 6.0 7.3e-27 94.0 5.5 1.5 1 1 1 2 2 2 1 Got1/Sft2-like family Pkr1 PF08636.10 ORF67800 - 5.1 7.3 9.9 2.7 8.2 7.2 1.8 2 0 0 2 2 2 0 ER protein Pkr1 COPI_assoc PF08507.10 ORF67299 - 0.00018 21.6 7.1 0.00032 20.7 7.1 1.4 1 1 0 1 1 1 1 COPI associated protein ExoD PF06055.12 ORF67299 - 0.93 8.8 5.0 0.12 11.7 0.4 1.8 2 1 0 2 2 2 0 Exopolysaccharide synthesis, ExoD LptC PF06835.13 ORF66778 - 6.4e-54 182.2 2.1 7.3e-54 182.0 2.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide-assembly, LptC-related PDGLE PF13190.6 ORF64464 - 0.018 15.0 0.0 0.033 14.1 0.0 1.5 1 0 0 1 1 1 0 PDGLE domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks124.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks124.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks124.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks124.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- START PF01852.19 ORF57983 - 4e-07 29.6 0.0 4.7e-07 29.4 0.0 1.0 1 0 0 1 1 1 1 START domain NPV_P10 PF05531.12 ORF56255 - 0.21 12.1 2.2 2 8.9 0.8 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF725 PF05267.12 ORF56255 - 0.22 11.5 10.9 0.32 11.0 3.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF725) ALS_ss_C PF10369.9 ORF56255 - 0.24 11.6 1.2 0.67 10.2 0.1 2.2 2 1 1 3 3 3 0 Small subunit of acetolactate synthase KASH_CCD PF14662.6 ORF56255 - 0.3 10.9 9.0 0.14 12.0 5.8 1.9 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Laminin_II PF06009.12 ORF56255 - 0.38 10.8 6.9 0.16 12.0 2.7 2.2 2 1 0 2 2 2 0 Laminin Domain II DUF1664 PF07889.12 ORF56255 - 0.53 10.3 6.3 0.39 10.8 3.2 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF3523 PF12037.8 ORF56255 - 0.66 9.3 5.3 0.92 8.8 5.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) DUF2570 PF10828.8 ORF56255 - 3.2 7.6 8.5 1.2 9.0 6.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2570) DUF16 PF01519.16 ORF56255 - 3.9 8.0 9.0 2.8 8.5 7.1 1.7 2 0 0 2 2 2 0 Protein of unknown function DUF16 Ham1p_like PF01725.16 ORF53481 - 1.7e-56 191.1 0.0 1.9e-56 191.0 0.0 1.0 1 0 0 1 1 1 1 Ham1 family TB2_DP1_HVA22 PF03134.19 ORF46288 - 1.7e-12 47.1 7.0 1.7e-12 47.1 7.0 1.6 2 0 0 2 2 2 1 TB2/DP1, HVA22 family EMC3_TMCO1 PF01956.16 ORF46060 - 1.3e-29 103.1 5.0 1.6e-29 102.8 5.0 1.0 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like POR PF01558.18 ORF46060 - 0.069 13.2 0.0 0.091 12.8 0.0 1.2 1 0 0 1 1 1 0 Pyruvate ferredoxin/flavodoxin oxidoreductase CHD5 PF04420.14 ORF46060 - 0.75 9.6 5.0 1.8 8.4 5.0 1.5 1 1 0 1 1 1 0 CHD5-like protein PTN_MK_N PF05196.13 ORF45872 - 0.05 13.8 0.8 0.13 12.5 0.2 2.0 2 0 0 2 2 2 0 PTN/MK heparin-binding protein family, N-terminal domain DUF1732 PF08340.11 ORF45611 - 1.4e-34 117.9 7.0 1.4e-34 117.9 7.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1732) YicC_N PF03755.13 ORF45611 - 2.8e-07 31.1 0.1 2.8e-07 31.1 0.1 2.5 2 1 0 2 2 2 1 YicC-like family, N-terminal region UBN_AB PF14075.6 ORF45611 - 0.036 13.8 4.7 0.057 13.1 2.4 2.1 1 1 1 2 2 2 0 Ubinuclein conserved middle domain DDE_Tnp_IS66 PF03050.14 ORF45611 - 0.053 13.0 2.3 0.072 12.5 0.4 1.9 2 0 0 2 2 2 0 Transposase IS66 family Cnn_1N PF07989.11 ORF45611 - 2.8 8.2 13.4 0.63 10.2 1.0 2.7 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 Comm PF15957.5 ORF36372 - 0.073 13.4 0.4 1.7 9.0 0.1 2.3 2 1 0 2 2 2 0 Commissureless Asp_protease PF09668.10 ORF36127 - 1.3e-24 86.4 0.4 1.9e-24 85.9 0.4 1.3 1 0 0 1 1 1 1 Aspartyl protease UBA PF00627.31 ORF36127 - 4.7e-08 32.8 0.2 8.3e-08 32.0 0.2 1.4 1 0 0 1 1 1 1 UBA/TS-N domain gag-asp_proteas PF13975.6 ORF36127 - 0.0011 19.4 0.1 0.0022 18.5 0.1 1.6 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease RVP_2 PF08284.11 ORF36127 - 0.0012 18.6 0.2 0.0026 17.5 0.1 1.5 1 1 0 1 1 1 1 Retroviral aspartyl protease HOIP-UBA PF16678.5 ORF36127 - 0.04 13.9 0.2 0.65 10.0 0.1 2.1 2 0 0 2 2 2 0 HOIP UBA domain pair DUF3173 PF11372.8 ORF36127 - 0.15 12.0 0.1 0.47 10.4 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3173) LLC1 PF14945.6 ORF35440 - 0.013 16.1 1.6 0.031 14.9 0.2 2.0 2 0 0 2 2 2 0 Normal lung function maintenance, Low in Lung Cancer 1 protein Polyoma_agno PF01736.16 ORF34891 - 0.1 12.3 0.1 0.21 11.4 0.1 1.5 1 0 0 1 1 1 0 Polyomavirus agnoprotein ART PF01129.18 ORF34195 - 0.018 14.3 0.0 0.024 13.9 0.0 1.2 1 0 0 1 1 1 0 NAD:arginine ADP-ribosyltransferase MARVEL PF01284.23 ORF32860 - 0.0061 16.6 4.9 0.26 11.3 4.9 2.3 1 1 0 1 1 1 1 Membrane-associating domain DUF5408 PF17402.2 ORF32860 - 7 6.6 7.4 1.8 8.5 1.6 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5408) EF-hand_1 PF00036.32 ORF30705 - 5.5e-13 47.5 4.0 6.7e-07 28.4 0.4 2.7 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF30705 - 1.1e-12 46.8 3.8 5.7e-07 28.7 0.7 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF30705 - 1.3e-12 48.0 0.1 2.4e-12 47.1 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF30705 - 6.4e-11 41.3 1.5 0.00039 20.1 0.1 2.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF30705 - 1.9e-08 34.0 1.6 1.7e-07 31.0 0.1 2.7 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF30705 - 0.013 15.8 0.3 0.29 11.4 0.3 2.2 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF30705 - 0.017 15.4 0.1 0.038 14.3 0.1 1.5 1 0 0 1 1 1 0 EF-hand domain Fer4_24 PF18109.1 ORF30705 - 0.024 14.9 0.2 0.079 13.2 0.2 2.0 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain adh_short PF00106.25 ORF30257 - 0.16 11.4 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 short chain dehydrogenase DUF1764 PF08576.10 ORF30108 - 4.4 8.3 10.6 0.49 11.3 2.3 2.3 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF1764) NPV_P10 PF05531.12 ORF28768 - 0.21 12.1 2.2 2 8.9 0.8 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF725 PF05267.12 ORF28768 - 0.22 11.5 10.9 0.32 11.0 3.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF725) ALS_ss_C PF10369.9 ORF28768 - 0.24 11.6 1.2 0.67 10.2 0.1 2.2 2 1 1 3 3 3 0 Small subunit of acetolactate synthase KASH_CCD PF14662.6 ORF28768 - 0.3 10.9 9.0 0.14 12.0 5.8 1.9 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Laminin_II PF06009.12 ORF28768 - 0.38 10.8 6.9 0.16 12.0 2.7 2.2 2 1 0 2 2 2 0 Laminin Domain II DUF1664 PF07889.12 ORF28768 - 0.53 10.3 6.3 0.39 10.8 3.2 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF3523 PF12037.8 ORF28768 - 0.66 9.3 5.3 0.92 8.8 5.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) DUF2570 PF10828.8 ORF28768 - 3.2 7.6 8.5 1.2 9.0 6.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2570) DUF16 PF01519.16 ORF28768 - 3.9 8.0 9.0 2.8 8.5 7.1 1.7 2 0 0 2 2 2 0 Protein of unknown function DUF16 Tom6 PF17112.5 ORF27878 - 0.051 13.1 0.5 1.1 8.8 0.4 2.6 2 0 0 2 2 2 0 Mitochondrial import receptor subunit Tom6, fungal Ribosomal_S8e PF01201.22 ORF26306 - 8.1e-48 162.1 2.4 9.3e-48 161.9 2.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e Mu-like_Pro PF10123.9 ORF26306 - 0.031 13.9 0.0 0.034 13.7 0.0 1.1 1 0 0 1 1 1 0 Mu-like prophage I protein Lip_prot_lig_C PF10437.9 ORF26306 - 0.12 12.4 0.4 0.34 10.9 0.2 1.9 1 1 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus DUF2878 PF11086.8 ORF25467 - 6.3e-24 84.9 16.1 7.4e-24 84.7 16.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2878) MR_MLE_C PF13378.6 ORF24023 - 1.1e-43 149.3 0.0 1.3e-43 149.1 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like Fringe PF02434.16 ORF23968 - 0.013 14.9 0.0 0.029 13.8 0.0 1.5 2 0 0 2 2 2 0 Fringe-like Presenilin PF01080.17 ORF23773 - 8.2 5.1 5.2 9.7 4.8 5.2 1.2 1 0 0 1 1 1 0 Presenilin Statherin PF03875.13 ORF23524 - 0.39 10.8 5.7 0.87 9.7 5.7 1.6 1 0 0 1 1 1 0 Statherin ESR1_C PF12743.7 ORF215 - 0.019 14.7 0.0 0.08 12.7 0.1 2.0 2 0 0 2 2 2 0 Oestrogen-type nuclear receptor final C-terminal OS-D PF03392.13 ORF20956 - 0.37 10.9 4.9 0.77 9.9 4.9 1.6 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D SET PF00856.28 ORF19303 - 1.9e-10 41.4 0.0 3.8e-10 40.4 0.0 1.5 2 0 0 2 2 2 1 SET domain Reprolysin_2 PF13574.6 ORF17763 - 0.018 15.0 0.3 0.024 14.5 0.3 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Pro_isomerase PF00160.21 ORF16146 - 1.3e-47 162.0 0.1 1.5e-47 161.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RNase_H_2 PF13482.6 ORF16146 - 0.18 11.8 0.0 5.4 7.0 0.0 2.1 2 0 0 2 2 2 0 RNase_H superfamily Mito_carr PF00153.27 ORF16091 - 3e-17 62.3 0.5 2.2e-10 40.3 0.0 2.4 2 1 0 2 2 2 2 Mitochondrial carrier protein EF-hand_7 PF13499.6 ORF152736 - 7.8e-18 64.7 11.0 3.1e-08 34.0 1.8 3.5 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF152736 - 5.2e-17 60.3 9.9 0.0018 18.1 0.3 4.9 4 1 1 5 5 5 4 EF-hand domain EF-hand_1 PF00036.32 ORF152736 - 1.4e-15 55.6 15.4 0.00036 19.9 0.0 5.7 6 1 0 6 6 6 4 EF hand EF-hand_8 PF13833.6 ORF152736 - 3.2e-12 46.1 10.7 6e-08 32.4 0.9 3.1 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF152736 - 5.2e-09 35.2 18.2 6.6e-05 22.2 0.8 4.9 5 1 0 5 5 5 3 EF hand Caleosin PF05042.13 ORF152736 - 0.0028 17.6 1.5 1.2 9.1 0.0 3.1 1 1 2 3 3 3 2 Caleosin related protein Dockerin_1 PF00404.18 ORF152736 - 0.03 14.5 1.0 0.68 10.2 0.3 2.9 2 1 1 3 3 3 0 Dockerin type I domain XS PF03468.14 ORF152736 - 0.064 13.6 0.0 0.22 11.8 0.0 1.9 1 1 0 1 1 1 0 XS domain DUF1218 PF06749.12 ORF14995 - 0.15 12.6 1.0 0.22 12.1 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) Pro_isomerase PF00160.21 ORF14987 - 1.3e-47 162.0 0.1 1.5e-47 161.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RNase_H_2 PF13482.6 ORF14987 - 0.18 11.8 0.0 5.4 7.0 0.0 2.1 2 0 0 2 2 2 0 RNase_H superfamily Mito_carr PF00153.27 ORF149308 - 3e-17 62.3 0.5 2.2e-10 40.3 0.0 2.4 2 1 0 2 2 2 2 Mitochondrial carrier protein RCDG1 PF15725.5 ORF149039 - 0.19 12.2 15.3 2.6 8.5 0.4 3.3 1 1 2 3 3 3 0 Renal cancer differentiation gene 1 protein zf-C3HC4_3 PF13920.6 ORF149014 - 1.8e-07 30.9 13.0 1.8e-07 30.9 13.0 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF149014 - 1e-05 25.2 17.5 1e-05 25.2 17.5 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF149014 - 2.3e-05 24.6 16.1 2.3e-05 24.6 16.1 1.8 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF149014 - 0.00049 19.9 16.9 0.00096 19.0 13.5 2.7 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) IBR PF01485.21 ORF149014 - 0.0021 18.3 8.6 1.3 9.3 0.0 2.3 2 0 0 2 2 2 2 IBR domain, a half RING-finger domain zf-C3HC4_4 PF15227.6 ORF149014 - 0.0041 17.2 8.8 0.0041 17.2 8.8 3.1 3 1 1 4 4 4 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF149014 - 0.0046 16.9 14.8 0.0046 16.9 14.8 2.1 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF149014 - 0.0068 16.4 16.6 0.068 13.2 9.5 2.9 4 0 0 4 4 4 2 RING-type zinc-finger zf-RING_6 PF14835.6 ORF149014 - 0.0073 16.2 4.8 0.015 15.2 4.8 1.5 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-TRAF PF02176.18 ORF149014 - 0.034 14.8 0.8 0.034 14.8 0.8 3.2 2 1 0 2 2 2 0 TRAF-type zinc finger DUF1360 PF07098.11 ORF149014 - 0.042 13.8 0.2 0.086 12.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) Tat PF00539.18 ORF149014 - 0.74 10.0 6.0 1.5 9.1 6.0 1.4 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) Cript PF10235.9 ORF149014 - 1.5 9.5 8.3 0.18 12.4 4.0 1.7 2 1 0 2 2 1 0 Microtubule-associated protein CRIPT Molybdop_Fe4S4 PF04879.16 ORF140493 - 0.022 14.7 6.0 0.1 12.6 1.7 2.6 2 0 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain MyTH4 PF00784.17 ORF140493 - 3.1 8.4 11.9 0.3 11.6 0.5 3.4 3 2 1 4 4 4 0 MyTH4 domain CAP_N PF01213.19 ORF139566 - 5.6 6.4 5.9 8 5.8 5.9 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Form_Nir_trans PF01226.17 ORF138735 - 2.4e-55 187.4 16.0 2.7e-55 187.3 16.0 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter L51_S25_CI-B8 PF05047.16 ORF1378 - 1e-07 31.7 0.0 2e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain COPI_assoc PF08507.10 ORF137714 - 5.5e-12 45.9 1.9 7.9e-12 45.4 1.9 1.2 1 0 0 1 1 1 1 COPI associated protein IFT43 PF15305.6 ORF135316 - 5.9e-24 84.8 0.2 8e-24 84.4 0.2 1.1 1 0 0 1 1 1 1 Intraflagellar transport protein 43 Translin PF01997.16 ORF134651 - 0.073 13.0 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Translin family PI3Ka PF00613.20 ORF134651 - 0.1 12.0 0.1 0.15 11.4 0.1 1.2 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) APG6 PF04111.12 ORF134151 - 4.7e-31 108.1 0.1 7.1e-31 107.5 0.1 1.2 1 0 0 1 1 1 1 Apg6 BARA domain TraD_N PF12615.8 ORF13396 - 0.065 14.0 0.7 0.13 13.1 0.7 1.5 1 1 0 1 1 1 0 F sex factor protein N terminal Glycoprotein_G PF00802.19 ORF133212 - 0.99 8.7 2.6 1.4 8.2 2.6 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G DUF2070 PF09843.9 ORF133212 - 10 4.3 5.8 10 4.3 5.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4988 PF16378.5 ORF130354 - 0.066 12.9 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function PDGLE PF13190.6 ORF126143 - 0.018 15.0 0.0 0.033 14.1 0.0 1.5 1 0 0 1 1 1 0 PDGLE domain Asp PF00026.23 ORF121896 - 1.5e-15 57.4 0.0 1.9e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease RCC1_2 PF13540.6 ORF121129 - 3.7e-10 39.3 3.4 0.14 12.0 0.0 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF121129 - 0.00045 20.5 0.4 1.2 9.5 0.0 3.4 1 1 2 3 3 3 2 TFIIH p62 subunit, N-terminal domain DUF155 PF02582.14 ORF121129 - 0.0033 17.5 1.2 15 5.6 1.3 3.8 2 1 0 2 2 2 2 Uncharacterised ACR, YagE family COG1723 PhnH PF05845.12 ORF121129 - 0.04 13.6 0.7 0.31 10.8 0.2 2.0 1 1 1 2 2 2 0 Bacterial phosphonate metabolism protein (PhnH) Choline_sulf_C PF12411.8 ORF121129 - 1.7 8.5 4.1 26 4.7 0.2 3.4 4 0 0 4 4 4 0 Choline sulfatase enzyme C terminal LRR_9 PF14580.6 ORF117149 - 2.2e-15 56.6 0.7 2.1e-08 33.8 0.3 2.0 1 1 1 2 2 2 2 Leucine-rich repeat LRR_4 PF12799.7 ORF117149 - 1.1e-13 51.0 16.9 9.7e-05 22.7 0.0 3.1 1 1 3 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF117149 - 5.6e-05 22.8 10.2 0.068 12.9 4.4 3.3 1 1 1 3 3 3 3 Leucine rich repeat VraX PF17412.2 ORF117149 - 0.043 13.5 0.1 0.13 11.9 0.0 1.8 2 0 0 2 2 2 0 Family of unknown function LRR_1 PF00560.33 ORF117149 - 0.32 11.7 5.1 43 5.2 0.1 4.1 4 0 0 4 4 4 0 Leucine Rich Repeat LRR_6 PF13516.6 ORF117149 - 3.6 7.9 7.7 17 5.8 0.3 3.9 4 0 0 4 4 4 0 Leucine Rich repeat ABC_tran PF00005.27 ORF116998 - 3.7 8.0 7.2 62 4.1 7.1 2.1 1 1 0 1 1 1 0 ABC transporter UBA_4 PF14555.6 ORF116769 - 0.0055 16.5 0.3 0.011 15.5 0.3 1.5 1 0 0 1 1 1 1 UBA-like domain Rieske PF00355.26 ORF114418 - 1e-11 44.6 1.1 1.6e-11 44.0 1.1 1.4 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain UCR_TM PF02921.14 ORF114418 - 0.00013 22.4 0.0 0.00024 21.5 0.0 1.4 1 0 0 1 1 1 1 Ubiquinol cytochrome reductase transmembrane region FXa_inhibition PF14670.6 ORF114418 - 0.15 12.4 3.5 0.26 11.6 3.5 1.3 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site Mx_ML PF17536.2 ORF111847 - 0.55 9.9 5.1 0.99 9.1 0.2 2.7 2 1 1 3 3 3 0 Matrix and Matrix long proteins N-terminal Cullin_Nedd8 PF10557.9 ORF110649 - 0.063 13.3 1.7 0.25 11.4 1.7 2.1 1 1 0 1 1 1 0 Cullin protein neddylation domain Fer2_BFD PF04324.15 ORF109498 - 0.079 13.3 4.3 5.1 7.5 0.1 2.9 3 0 0 3 3 3 0 BFD-like [2Fe-2S] binding domain DZR PF12773.7 ORF109498 - 0.27 11.3 4.7 4.9 7.3 1.2 2.8 1 1 1 2 2 2 0 Double zinc ribbon Beta-TrCP_D PF12125.8 ORF106250 - 0.083 12.8 0.1 0.17 11.8 0.1 1.5 1 0 0 1 1 1 0 D domain of beta-TrCP PPR_2 PF13041.6 ORF103446 - 1.5e-09 37.9 0.0 3.9e-07 30.2 0.0 3.0 2 1 1 3 3 3 1 PPR repeat family PPR PF01535.20 ORF103446 - 6.4e-06 26.1 0.1 0.0039 17.3 0.0 3.4 4 0 0 4 4 4 1 PPR repeat PPR_3 PF13812.6 ORF103446 - 0.00028 20.9 0.0 0.0015 18.5 0.0 2.2 3 0 0 3 3 3 1 Pentatricopeptide repeat domain RCDG1 PF15725.5 ORF101957 - 0.19 12.2 15.3 2.6 8.5 0.4 3.3 1 1 2 3 3 3 0 Renal cancer differentiation gene 1 protein SNAP PF14938.6 ORF10194 - 1.1e-43 149.7 0.0 1.4e-43 149.4 0.0 1.1 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP zf-C4_Topoisom PF01396.19 ORF100076 - 0.0018 18.0 0.1 0.0036 17.1 0.1 1.5 1 0 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger Aldedh PF00171.22 NODE_37505_length_568_cov_1.936210_g30255_i0reverse_frame_1 - 8.6e-20 70.7 0.2 1.2e-19 70.2 0.2 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Aldedh PF00171.22 NODE_37504_length_568_cov_1.936210_g30254_i0reverse_frame_1 - 1.6e-18 66.5 0.3 2.2e-18 66.0 0.3 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Complex1_51K PF01512.17 NODE_37503_length_568_cov_2.393996_g30253_i0forward_frame_1 - 1.6e-46 157.9 0.0 2e-46 157.7 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit SLBB PF10531.9 NODE_37503_length_568_cov_2.393996_g30253_i0forward_frame_1 - 1.4e-09 37.7 0.0 4.1e-09 36.2 0.0 1.8 2 0 0 2 2 2 1 SLBB domain zf-MYST PF17772.1 NODE_37497_length_568_cov_68.071295_g30247_i0reverse_frame_1 - 3.6 7.2 11.4 2.4 7.8 0.9 3.1 2 2 0 2 2 2 0 MYST family zinc finger domain GAGBD PF16828.5 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_1 - 0.0047 17.0 4.5 0.81 9.8 0.7 2.1 2 0 0 2 2 2 2 GAG-binding domain on surface antigen ITAM_Cys-rich PF10538.9 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_1 - 4.5 7.1 8.5 13 5.7 0.8 2.5 2 0 0 2 2 2 0 Immunoreceptor tyrosine-based activation motif Cadherin_C_2 PF16492.5 NODE_37494_length_568_cov_78.018762_g30244_i0forward_frame_1 - 0.1 13.4 0.7 0.1 13.4 0.7 2.8 3 1 0 3 3 3 0 Cadherin cytoplasmic C-terminal zf-CCCH_3 PF15663.5 NODE_37492_length_568_cov_79.540338_g30242_i0reverse_frame_1 - 0.44 10.8 3.9 0.93 9.7 3.9 1.5 1 0 0 1 1 1 0 Zinc-finger containing family PsbL PF02419.17 NODE_37462_length_568_cov_2804.699812_g30216_i0reverse_frame_1 - 2.9e-18 65.5 0.9 6.6e-18 64.4 0.9 1.6 1 0 0 1 1 1 1 PsbL protein F-box PF00646.33 NODE_37450_length_569_cov_4.588015_g30204_i0forward_frame_1 - 9.8 6.2 9.3 1.4 8.9 1.2 2.5 2 1 0 2 2 2 0 F-box domain DUF202 PF02656.15 NODE_37445_length_569_cov_45.466292_g30199_i0reverse_frame_1 - 0.15 12.5 2.1 0.38 11.2 0.0 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF202) DUF1376 PF07120.11 NODE_37429_length_569_cov_113.271536_g30183_i0reverse_frame_1 - 0.0089 16.3 0.7 0.021 15.2 0.5 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1376) Hemagglutinin PF00509.18 NODE_37428_length_569_cov_118.464419_g30182_i0forward_frame_1 - 0.027 12.9 0.1 0.035 12.5 0.1 1.1 1 0 0 1 1 1 0 Haemagglutinin vMSA PF00695.19 NODE_37427_length_569_cov_125.224719_g19526_i1reverse_frame_1 - 0.42 9.7 7.2 1 8.4 7.3 1.7 1 1 0 1 1 1 0 Major surface antigen from hepadnavirus NIF PF03031.18 NODE_37424_length_569_cov_151.786517_g30179_i0reverse_frame_1 - 1.1e-25 90.2 0.0 1.4e-25 89.9 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Hydrolase PF00702.26 NODE_37424_length_569_cov_151.786517_g30179_i0reverse_frame_1 - 0.05 13.9 0.0 0.08 13.2 0.0 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase HAD PF12710.7 NODE_37424_length_569_cov_151.786517_g30179_i0reverse_frame_1 - 0.065 13.6 0.0 0.096 13.1 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase mTERF PF02536.14 NODE_37412_length_569_cov_275.149813_g30167_i0forward_frame_1 - 8.5e-08 31.5 0.0 1.4e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 mTERF DUF3367 PF11847.8 NODE_37409_length_569_cov_345.880150_g30164_i0forward_frame_1 - 0.12 10.3 0.8 0.16 9.8 0.8 1.1 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase DUF3367 PF11847.8 NODE_37405_length_569_cov_376.382022_g30160_i0reverse_frame_1 - 0.12 10.2 0.8 0.16 9.8 0.8 1.1 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase Cass2 PF14526.6 NODE_37396_length_569_cov_17421.814607_g30155_i0forward_frame_1 - 0.057 13.6 0.1 0.083 13.1 0.1 1.3 1 0 0 1 1 1 0 Integron-associated effector binding protein MFS_1 PF07690.16 NODE_37393_length_570_cov_2.923364_g30152_i0reverse_frame_1 - 0.00016 20.8 3.4 0.00019 20.5 3.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily TTL PF03133.15 NODE_37391_length_570_cov_3.373832_g30150_i0forward_frame_1 - 1.2e-22 80.4 0.3 2.9e-22 79.2 0.0 1.6 1 1 1 2 2 2 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_37391_length_570_cov_3.373832_g30150_i0forward_frame_1 - 1.1e-06 28.1 0.3 4.1e-06 26.2 0.0 2.1 2 1 1 3 3 3 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_37391_length_570_cov_3.373832_g30150_i0forward_frame_1 - 0.002 17.5 0.0 0.003 16.8 0.0 1.3 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp Shisa PF13908.6 NODE_37379_length_570_cov_80.414953_g30140_i0reverse_frame_1 - 0.00064 20.0 3.3 0.00064 20.0 3.3 1.4 1 1 0 1 1 1 1 Wnt and FGF inhibitory regulator AJAP1_PANP_C PF15298.6 NODE_37379_length_570_cov_80.414953_g30140_i0reverse_frame_1 - 0.0019 18.5 2.3 0.0026 18.0 2.3 1.2 1 0 0 1 1 1 1 AJAP1/PANP C-terminus Prominin PF05478.11 NODE_37379_length_570_cov_80.414953_g30140_i0reverse_frame_1 - 0.0046 15.0 2.9 0.0059 14.6 2.9 1.1 1 0 0 1 1 1 1 Prominin GCV_H PF01597.19 NODE_37350_length_570_cov_317.024299_g30113_i0reverse_frame_1 - 4.2e-35 120.3 0.0 5.4e-35 119.9 0.0 1.1 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 NODE_37350_length_570_cov_317.024299_g30113_i0reverse_frame_1 - 0.0041 16.9 0.0 0.011 15.6 0.0 1.7 1 0 0 1 1 1 1 Biotin-requiring enzyme DUF3149 PF11346.8 NODE_37345_length_570_cov_1076.779439_g30109_i0reverse_frame_1 - 0.0044 16.6 0.1 0.012 15.2 0.1 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3149) DUF2197 PF09963.9 NODE_37318_length_571_cov_117.729478_g30084_i0reverse_frame_3 - 0.079 13.2 0.2 0.53 10.6 0.1 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) RNase_T PF00929.24 NODE_37304_length_571_cov_222.417910_g30072_i0reverse_frame_2 - 6.8e-26 91.8 0.0 8.7e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 NODE_37304_length_571_cov_222.417910_g30072_i0reverse_frame_2 - 3.6e-06 27.1 0.1 5e-06 26.6 0.1 1.1 1 0 0 1 1 1 1 3' exoribonuclease, RNase T-like ISP3_C PF18045.1 NODE_37304_length_571_cov_222.417910_g30072_i0forward_frame_2 - 0.071 13.0 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 ISP3 C-terminal NUC205 PF08168.11 NODE_37304_length_571_cov_222.417910_g30072_i0forward_frame_2 - 0.16 11.5 3.1 4 7.0 1.5 2.7 2 0 0 2 2 2 0 NUC205 domain Dynamitin PF04912.14 NODE_37299_length_571_cov_310.755597_g14596_i2forward_frame_2 - 0.009 15.4 0.6 0.01 15.2 0.6 1.1 1 0 0 1 1 1 1 Dynamitin FMN_bind_2 PF04299.12 NODE_37299_length_571_cov_310.755597_g14596_i2forward_frame_2 - 0.09 12.5 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Putative FMN-binding domain Cas1_AcylT PF07779.12 NODE_37296_length_571_cov_483.067164_g30065_i0reverse_frame_2 - 0.2 10.6 0.0 0.24 10.3 0.0 1.1 1 0 0 1 1 1 0 10 TM Acyl Transferase domain found in Cas1p Fimbrial PF00419.20 NODE_37286_length_572_cov_3.098696_g30055_i0forward_frame_2 - 0.0018 18.6 5.2 0.0024 18.1 5.2 1.1 1 0 0 1 1 1 1 Fimbrial protein PGDH_C PF16896.5 NODE_37285_length_572_cov_3.126629_g30054_i0reverse_frame_3 - 0.063 13.2 0.6 0.096 12.6 0.6 1.2 1 0 0 1 1 1 0 Phosphogluconate dehydrogenase (decarboxylating) C-term Granulin PF00396.18 NODE_37285_length_572_cov_3.126629_g30054_i0forward_frame_3 - 4 7.8 20.1 2.1 8.7 8.5 3.3 2 1 1 3 3 3 0 Granulin DUF1932 PF09130.11 NODE_37279_length_572_cov_69.117318_g30048_i0reverse_frame_2 - 0.055 13.4 0.6 0.089 12.8 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) p47_phox_C PF08944.11 NODE_37276_length_572_cov_87.059590_g30045_i0forward_frame_3 - 1.7 8.2 6.0 6.9 6.2 0.1 3.7 4 0 0 4 4 4 0 NADPH oxidase subunit p47Phox, C terminal domain fn3 PF00041.21 NODE_37269_length_572_cov_102.370577_g30038_i0forward_frame_2 - 1e-12 48.2 1.9 6.1e-06 26.5 0.2 2.5 2 0 0 2 2 2 2 Fibronectin type III domain AOX PF01786.17 NODE_37265_length_572_cov_150.733706_g30034_i0forward_frame_3 - 0.00084 19.0 0.1 0.0013 18.4 0.1 1.2 1 0 0 1 1 1 1 Alternative oxidase Ras PF00071.22 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 1.4e-28 99.6 0.0 1.6e-28 99.4 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 1.9e-14 53.9 0.0 2.6e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 2.2e-10 40.3 0.0 2.5e-10 40.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 0.00092 18.6 0.0 0.0012 18.3 0.0 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 0.0013 18.3 0.0 0.0046 16.5 0.0 1.7 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 0.0048 17.0 0.0 0.0073 16.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 NODE_37253_length_572_cov_368.664804_g30023_i0reverse_frame_3 - 0.14 11.7 0.0 0.36 10.4 0.0 1.9 1 1 0 1 1 1 0 Ferrous iron transport protein B PAP_fibrillin PF04755.12 NODE_37250_length_572_cov_540.657356_g30020_i0reverse_frame_3 - 0.0025 17.8 0.0 0.0041 17.1 0.0 1.3 1 0 0 1 1 1 1 PAP_fibrillin Isochorismatase PF00857.20 NODE_37240_length_573_cov_2.758364_g30011_i0reverse_frame_2 - 1.1e-32 113.6 0.0 1.3e-32 113.4 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family XAF1_C PF18608.1 NODE_37240_length_573_cov_2.758364_g30011_i0forward_frame_3 - 0.0097 15.4 0.1 0.019 14.5 0.1 1.5 1 0 0 1 1 1 1 XIAP-associated factor 1 C-terminal domain UBA_4 PF14555.6 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_3 - 0.034 13.9 0.0 0.057 13.2 0.0 1.3 1 0 0 1 1 1 0 UBA-like domain Rad50_zn_hook PF04423.14 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_2 - 0.05 13.4 1.4 0.086 12.7 1.4 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif Enterotoxin_ST PF02048.16 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_2 - 0.13 12.8 0.6 0.13 12.8 0.6 2.5 2 0 0 2 2 2 0 Heat-stable enterotoxin ST NOB1_Zn_bind PF08772.11 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_2 - 0.36 11.0 8.9 0.23 11.6 1.8 2.4 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Sgf11 PF08209.11 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_2 - 0.67 9.6 6.0 8.1 6.1 0.3 2.5 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) HypA PF01155.19 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_2 - 3.1 7.9 9.1 1.4 8.9 1.1 2.2 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Cript PF10235.9 NODE_37236_length_573_cov_3.068773_g30007_i0reverse_frame_2 - 4.2 8.0 11.4 0.22 12.1 1.8 2.6 2 1 0 2 2 2 0 Microtubule-associated protein CRIPT Phage_holin_2_1 PF04971.12 NODE_37236_length_573_cov_3.068773_g30007_i0forward_frame_3 - 1.6e-31 108.1 0.2 2.5e-31 107.5 0.2 1.3 1 0 0 1 1 1 1 Bacteriophage P21 holin S Phage_holin_2_3 PF16080.5 NODE_37236_length_573_cov_3.068773_g30007_i0forward_frame_3 - 0.0021 17.8 0.1 0.0038 17.0 0.1 1.5 1 0 0 1 1 1 1 Bacteriophage holin family HP1 MyTH4 PF00784.17 NODE_37207_length_573_cov_181.868030_g29980_i0reverse_frame_2 - 0.00012 22.5 3.4 0.24 11.9 0.3 2.3 1 1 1 2 2 2 2 MyTH4 domain DUF3864 PF12980.7 NODE_37207_length_573_cov_181.868030_g29980_i0reverse_frame_2 - 0.18 12.1 2.3 3.5 8.0 0.1 2.5 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3864) DUF2070 PF09843.9 NODE_37207_length_573_cov_181.868030_g29980_i0reverse_frame_2 - 4.1 5.6 10.3 3.8 5.7 10.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Furin-like PF00757.20 NODE_37205_length_573_cov_193.953532_g29978_i0reverse_frame_3 - 0.17 11.8 4.9 0.91 9.4 4.9 2.0 1 1 0 1 1 1 0 Furin-like cysteine rich region Carb_anhydrase PF00194.21 NODE_37200_length_573_cov_228.704461_g29973_i0reverse_frame_2 - 9.5e-25 87.6 0.0 1.4e-24 87.0 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Calsarcin PF05556.11 ORF94411 - 0.002 17.7 0.3 0.0025 17.4 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-binding protein (Calsarcin) RDD PF06271.12 ORF94379 - 0.34 11.1 9.4 2.2 8.5 9.6 2.1 1 1 0 1 1 1 0 RDD family TrbC PF04956.13 ORF94379 - 0.76 10.0 7.3 0.66 10.2 2.8 2.5 2 1 0 2 2 2 0 TrbC/VIRB2 family DUF2070 PF09843.9 ORF94379 - 5 5.3 7.1 6.1 5.0 7.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) CDC27 PF09507.10 ORF9377 - 0.15 11.5 3.6 0.19 11.1 3.6 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 cNMP_binding PF00027.29 ORF90526 - 1.2e-05 25.3 0.0 2e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MRJP PF03022.16 ORF90526 - 0.18 11.1 0.6 0.3 10.4 0.6 1.3 1 0 0 1 1 1 0 Major royal jelly protein DUF676 PF05057.14 ORF89995 - 1.3e-10 41.1 0.1 3.3e-10 39.8 0.0 1.7 2 0 0 2 2 2 1 Putative serine esterase (DUF676) ATG16 PF08614.11 ORF89962 - 0.038 14.2 5.7 0.064 13.5 5.7 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Smg8_Smg9 PF10220.9 ORF88972 - 8.9 4.5 5.7 12 4.1 5.7 1.0 1 0 0 1 1 1 0 Smg8_Smg9 DUF5301 PF17225.3 ORF85471 - 1.3 9.5 9.2 0.18 12.3 4.3 2.1 2 1 1 3 3 3 0 Domain of unknown function (DUF5300) PP2C PF00481.21 ORF8534 - 2.3e-06 27.5 0.0 3.6e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Protein phosphatase 2C Svf1_C PF17187.4 ORF81050 - 0.088 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Svf1-like C-terminal lipocalin-like domain YopE PF03545.13 ORF81050 - 0.13 12.4 0.4 2.8 8.2 0.0 2.3 1 1 1 2 2 2 0 Yersinia virulence determinant (YopE) ATG16 PF08614.11 ORF78747 - 0.038 14.2 5.7 0.064 13.5 5.7 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) YdjO PF14169.6 ORF75037 - 0.29 10.9 4.7 0.6 9.9 4.7 1.4 1 0 0 1 1 1 0 Cold-inducible protein YdjO H2TH PF06831.14 ORF73576 - 8.3e-19 67.4 0.0 1.2e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain FbpA PF05833.11 ORF73576 - 0.042 12.6 0.0 0.054 12.2 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) Arrestin_N PF00339.29 ORF72313 - 5.1e-08 33.1 0.0 6e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain NUDIX PF00293.28 ORF69809 - 3.8e-09 36.7 0.1 6.4e-09 35.9 0.1 1.4 1 0 0 1 1 1 1 NUDIX domain WES_acyltransf PF03007.16 ORF68983 - 1.3e-07 31.7 0.0 1.8e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF2244 PF10003.9 ORF6869 - 0.2 11.3 0.1 0.28 10.9 0.1 1.2 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) Vpu PF00558.19 ORF6869 - 0.92 9.3 2.5 1.9 8.3 2.5 1.5 1 0 0 1 1 1 0 Vpu protein Pkinase PF00069.25 ORF65751 - 2.3e-48 164.8 0.0 2.6e-48 164.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF65751 - 8e-17 61.4 0.0 9.4e-17 61.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF65751 - 0.00013 21.0 0.1 0.00019 20.5 0.1 1.3 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF65751 - 0.0013 18.7 0.2 0.0022 18.0 0.2 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF65751 - 0.002 17.5 0.3 0.0029 17.0 0.3 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF65751 - 0.0022 17.4 0.0 0.0034 16.8 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF65751 - 0.012 14.7 0.1 0.016 14.2 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 H2TH PF06831.14 ORF64434 - 8.3e-19 67.4 0.0 1.2e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain FbpA PF05833.11 ORF64434 - 0.042 12.6 0.0 0.054 12.2 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) YhfT PF10797.9 ORF63768 - 1.6e-74 251.4 13.0 1.8e-74 251.3 13.0 1.0 1 0 0 1 1 1 1 Protein of unknown function YvrJ PF12841.7 ORF63768 - 0.038 13.5 0.1 0.096 12.2 0.1 1.7 1 0 0 1 1 1 0 YvrJ protein family Bac_rhodopsin PF01036.18 ORF63768 - 0.2 11.2 12.5 1.4 8.5 2.1 2.1 2 0 0 2 2 2 0 Bacteriorhodopsin-like protein UPF0370 PF13980.6 ORF63521 - 0.18 11.9 0.1 3.1 7.9 0.0 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0370) MORN PF02493.20 ORF63262 - 2.6e-08 33.3 17.5 0.00035 20.3 3.0 4.7 4 0 0 4 4 4 3 MORN repeat DUF3048_C PF17479.2 ORF63262 - 0.46 10.9 7.8 0.51 10.7 3.3 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Arrestin_N PF00339.29 ORF58503 - 5.1e-08 33.1 0.0 6e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Pkinase PF00069.25 ORF5736 - 8.4e-27 94.2 0.2 1.2e-26 93.7 0.2 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF5736 - 2.2e-18 66.5 0.1 2.5e-18 66.3 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF5736 - 0.002 17.5 0.0 0.0024 17.3 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Orthopox_F14 PF06076.12 ORF5736 - 0.0047 17.2 0.1 0.024 14.9 0.0 2.1 3 0 0 3 3 3 1 Orthopoxvirus F14 protein Pkinase_fungal PF17667.1 ORF5736 - 0.091 11.5 0.1 0.11 11.2 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase GlutR_N PF05201.15 ORF57284 - 0.18 11.5 0.4 2.9 7.7 0.1 2.1 2 0 0 2 2 2 0 Glutamyl-tRNAGlu reductase, N-terminal domain DOR PF14839.6 ORF56278 - 1.4 8.8 6.7 1.1 9.2 1.0 2.1 2 0 0 2 2 2 0 DOR family AAA_21 PF13304.6 ORF56031 - 7.3e-05 22.7 0.0 0.00011 22.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Cdc6_C PF09079.11 ORF56031 - 0.0011 18.9 0.0 0.0038 17.2 0.0 1.8 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain TnpW PF14202.6 ORF56031 - 0.13 12.1 0.2 0.36 10.7 0.0 1.7 2 0 0 2 2 2 0 Transposon-encoded protein TnpW DUF2813 PF11398.8 ORF56031 - 0.17 11.1 0.1 0.49 9.6 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) HAD PF12710.7 ORF55571 - 4.8e-06 27.1 0.0 5.2e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF4046 PF13255.6 ORF5543 - 0.28 11.8 2.0 0.34 11.5 0.4 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF4046) Ala_racemase_N PF01168.20 ORF52585 - 0.038 13.6 0.0 0.053 13.2 0.0 1.2 1 0 0 1 1 1 0 Alanine racemase, N-terminal domain DUF349 PF03993.12 ORF52111 - 0.093 13.0 2.6 0.1 12.9 1.0 2.0 2 1 0 2 2 2 0 Domain of Unknown Function (DUF349) LRR_6 PF13516.6 ORF50372 - 0.25 11.5 1.0 29 5.1 0.1 2.7 2 0 0 2 2 2 0 Leucine Rich repeat Phage_lysozyme PF00959.19 ORF48777 - 7.2e-06 26.4 0.5 9.4e-06 26.0 0.5 1.1 1 0 0 1 1 1 1 Phage lysozyme Orbi_VP6 PF01516.16 ORF47756 - 0.094 12.2 0.1 0.14 11.7 0.1 1.2 1 0 0 1 1 1 0 Orbivirus helicase VP6 DUF778 PF05608.12 ORF47046 - 5e-30 105.3 8.2 3.6e-19 69.9 0.1 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF778) DUF2417 PF10329.9 ORF47046 - 0.04 13.4 0.3 0.053 12.9 0.3 1.2 1 0 0 1 1 1 0 Region of unknown function (DUF2417) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks125.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks125.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks125.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks125.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:00:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Guanylate_cyc PF00211.20 ORF45851 - 6.2e-09 35.7 0.1 1.1e-08 34.9 0.1 1.4 1 1 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain NUDIX PF00293.28 ORF45457 - 3.8e-09 36.7 0.1 6.4e-09 35.9 0.1 1.4 1 0 0 1 1 1 1 NUDIX domain DUF4046 PF13255.6 ORF43174 - 0.28 11.8 2.0 0.34 11.5 0.4 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF4046) DUF2959 PF11172.8 ORF42502 - 0.0035 17.5 0.8 0.0045 17.2 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2959) SRP_TPR_like PF17004.5 ORF42502 - 0.37 10.8 5.9 1.5 8.9 5.9 2.1 1 1 0 1 1 1 0 Putative TPR-like repeat DUF4946 PF16304.5 ORF42020 - 0.14 11.9 0.5 0.31 10.7 0.2 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4946) ATP-synt_B PF00430.18 ORF41825 - 3.7e-13 49.7 8.2 4.8e-13 49.3 8.2 1.1 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) IFT57 PF10498.9 ORF41825 - 0.0007 18.7 4.8 0.001 18.1 4.8 1.3 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Cystatin PF00031.21 ORF41825 - 0.0012 19.1 3.2 0.0021 18.3 2.7 1.7 1 1 1 2 2 2 1 Cystatin domain ApbA_C PF08546.11 ORF41825 - 0.0091 16.2 1.3 0.013 15.6 1.3 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal AAA_13 PF13166.6 ORF41825 - 0.011 14.4 5.9 0.013 14.2 5.9 1.1 1 0 0 1 1 1 0 AAA domain ARGLU PF15346.6 ORF41825 - 0.023 14.6 7.6 0.031 14.2 7.6 1.1 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 DUF842 PF05811.13 ORF41825 - 0.025 14.3 2.8 0.035 13.8 2.8 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) HAUS6_N PF14661.6 ORF41825 - 0.053 13.1 3.3 0.067 12.8 3.3 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Allexi_40kDa PF05549.11 ORF41825 - 0.096 12.2 2.2 0.12 11.8 2.2 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein T2SSM PF04612.12 ORF41825 - 0.12 12.5 6.0 0.8 9.7 3.0 2.1 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein M AI-2E_transport PF01594.16 ORF41825 - 0.13 11.4 0.0 0.17 11.0 0.0 1.3 1 0 0 1 1 1 0 AI-2E family transporter Seryl_tRNA_N PF02403.22 ORF41825 - 0.14 12.4 12.5 0.083 13.1 9.5 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain LMBR1 PF04791.16 ORF41825 - 0.18 10.7 1.4 0.21 10.5 1.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF763 PF05559.11 ORF41825 - 0.23 10.6 2.7 0.29 10.3 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF763) Fib_alpha PF08702.10 ORF41825 - 0.31 11.2 8.0 0.41 10.8 7.1 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_S46 PF10459.9 ORF41825 - 0.33 9.5 9.8 0.39 9.3 9.8 1.0 1 0 0 1 1 1 0 Peptidase S46 V-ATPase_G_2 PF16999.5 ORF41825 - 0.96 9.9 18.2 1.2 9.6 15.9 1.9 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit Jnk-SapK_ap_N PF09744.9 ORF41825 - 1.1 9.4 10.3 1.4 9.1 10.3 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 PdaC PF13739.6 ORF41825 - 2.3 9.3 9.6 2.7 9.0 4.2 2.3 1 1 1 2 2 2 0 Deacetylase PdaC ZYG-11_interact PF05884.12 ORF41825 - 2.7 7.3 4.4 3.5 6.9 4.4 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 TMPIT PF07851.13 ORF41825 - 6.1 6.0 7.0 7.3 5.7 7.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein YtxH PF12732.7 ORF41825 - 7.7 7.1 10.1 27 5.4 10.0 2.1 1 1 0 1 1 1 0 YtxH-like protein Rubredoxin_2 PF18073.1 ORF41376 - 1.1e-12 47.4 6.1 1.7e-12 46.8 6.1 1.3 1 0 0 1 1 1 1 Rubredoxin metal binding domain TPR_8 PF13181.6 ORF41376 - 2.4e-06 27.3 0.0 0.013 15.6 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF41376 - 2.3e-05 24.8 0.9 0.0008 19.9 0.0 2.6 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF41376 - 0.00021 21.8 2.4 0.033 15.0 0.0 3.7 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_20 PF14561.6 ORF41376 - 0.00021 21.6 1.6 0.12 12.7 0.0 2.3 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF41376 - 0.00054 19.9 0.0 0.0095 16.0 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF41376 - 0.00059 19.7 0.5 0.12 12.4 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF41376 - 0.00096 19.6 1.5 0.075 13.7 0.0 3.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF41376 - 0.00097 18.9 0.0 0.016 15.0 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF41376 - 0.0014 18.3 0.0 0.003 17.2 0.0 1.6 1 0 0 1 1 1 1 TPR repeat TPR_12 PF13424.6 ORF41376 - 0.0024 18.1 0.1 0.0071 16.6 0.1 1.9 1 1 0 1 1 1 1 Tetratricopeptide repeat SPG48 PF14764.6 ORF41376 - 0.016 15.6 0.0 0.03 14.8 0.0 1.5 1 0 0 1 1 1 0 AP-5 complex subunit, vesicle trafficking TBCA PF02970.16 ORF41376 - 0.058 13.7 1.9 0.25 11.7 0.3 2.2 2 0 0 2 2 2 0 Tubulin binding cofactor A Nudix_N_2 PF14803.6 ORF41376 - 0.064 13.2 0.4 0.064 13.2 0.4 2.1 2 0 0 2 2 2 0 Nudix N-terminal HypA PF01155.19 ORF41376 - 0.093 12.8 2.4 0.46 10.5 2.4 2.1 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1 PF03811.13 ORF41376 - 0.12 12.2 2.3 7.8 6.3 0.1 2.5 2 0 0 2 2 2 0 InsA N-terminal domain YscO PF07321.12 ORF41376 - 0.33 10.9 4.7 0.18 11.8 1.6 1.9 1 1 1 2 2 2 0 Type III secretion protein YscO zinc_ribbon_10 PF10058.9 ORF41376 - 2.5 7.9 5.7 12 5.7 0.4 2.4 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein MFS_1_like PF12832.7 ORF39809 - 2.8 6.7 10.1 4.3 6.1 0.8 2.1 2 0 0 2 2 2 0 MFS_1 like family LINES_C PF14695.6 ORF36295 - 0.12 11.9 0.1 0.17 11.4 0.1 1.2 1 0 0 1 1 1 0 Lines C-terminus LRR19-TM PF15176.6 ORF32560 - 0.00087 19.2 0.2 0.00087 19.2 0.2 1.9 1 1 1 2 2 2 1 Leucine-rich repeat family 19 TM domain WBP-1 PF11669.8 ORF32560 - 0.0074 16.9 0.3 0.18 12.5 0.0 2.2 2 0 0 2 2 2 1 WW domain-binding protein 1 Comm PF15957.5 ORF32560 - 0.056 13.8 6.0 1.9 8.8 1.4 2.2 1 1 1 2 2 2 0 Commissureless Shisa PF13908.6 ORF32560 - 0.068 13.4 1.2 0.08 13.2 0.0 1.7 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator DUF4834 PF16118.5 ORF32560 - 0.15 13.1 3.2 5.9 7.9 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4834) DUF3899 PF13038.6 ORF32560 - 0.35 11.4 3.4 1.2 9.7 3.4 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3899) Sigma_reg_N PF13800.6 ORF32560 - 0.39 11.0 3.4 0.66 10.3 0.2 2.4 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Ninjurin PF04923.12 ORF32560 - 1.9 8.4 6.3 1.4 8.9 0.2 2.3 1 1 1 2 2 2 0 Ninjurin GARP PF16731.5 ORF30427 - 0.24 11.1 0.2 0.36 10.5 0.1 1.4 1 1 0 1 1 1 0 Glutamic acid/alanine-rich protein of Trypanosoma COPI_assoc PF08507.10 ORF29371 - 2.3e-08 34.2 10.1 3.1e-08 33.7 10.1 1.2 1 0 0 1 1 1 1 COPI associated protein WGR PF05406.15 ORF29320 - 8e-13 48.3 1.0 8e-13 48.3 1.0 1.7 2 0 0 2 2 2 1 WGR domain PARP_reg PF02877.14 ORF29320 - 0.00019 21.5 1.0 0.00019 21.5 1.0 1.6 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase, regulatory domain Peptidase_S74 PF13884.6 ORF29320 - 0.067 13.5 0.7 0.15 12.4 0.7 1.7 1 0 0 1 1 1 0 Chaperone of endosialidase tRNA_edit PF04073.15 ORF29112 - 3.4e-25 88.5 0.0 4.4e-25 88.1 0.0 1.2 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain Rota_NS35 PF02509.14 ORF29112 - 0.09 11.8 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 35 Cu2_monooxygen PF01082.20 ORF28240 - 0.045 14.0 0.3 0.091 13.0 0.1 1.6 1 1 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain DUF3685 PF12452.8 ORF27202 - 0.078 12.7 0.3 0.12 12.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) NAD_binding_1 PF00175.21 ORF27202 - 0.097 13.3 0.7 0.18 12.5 0.7 1.5 1 1 0 1 1 1 0 Oxidoreductase NAD-binding domain PP2C_C PF07830.13 ORF27202 - 0.75 10.3 6.2 0.83 10.2 3.4 2.1 2 0 0 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain betaPIX_CC PF16523.5 ORF27202 - 1.7 8.5 8.5 2.3 8.1 3.0 2.8 3 0 0 3 3 3 0 betaPIX coiled coil Myc_target_1 PF15179.6 ORF2644 - 0.072 13.0 4.2 0.089 12.7 3.8 1.6 1 1 0 1 1 1 0 Myc target protein 1 NUDIX PF00293.28 ORF26421 - 3.8e-09 36.7 0.1 6.4e-09 35.9 0.1 1.4 1 0 0 1 1 1 1 NUDIX domain GAPT PF11770.8 ORF26381 - 0.088 12.7 2.0 3.7 7.4 0.1 2.4 2 0 0 2 2 2 0 GRB2-binding adapter (GAPT) Radical_SAM PF04055.21 ORF26381 - 0.24 11.7 1.5 30 4.9 0.0 3.0 3 0 0 3 3 3 0 Radical SAM superfamily SPATA6 PF14909.6 ORF26381 - 0.62 10.2 3.3 60 3.8 0.2 3.1 3 0 0 3 3 3 0 Spermatogenesis-assoc protein 6 Bowman-Birk_leg PF00228.20 ORF26381 - 4.1 7.9 10.3 15 6.1 0.3 3.6 3 0 0 3 3 3 0 Bowman-Birk serine protease inhibitor family PH PF00169.29 ORF25725 - 0.0014 19.1 0.9 0.0025 18.3 0.9 1.6 1 1 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF25725 - 0.38 11.2 6.3 2.5 8.6 6.3 2.2 1 1 0 1 1 1 0 Pleckstrin homology domain EF-hand_6 PF13405.6 ORF25229 - 0.00061 19.5 0.2 0.0022 17.8 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF25229 - 0.0029 17.0 0.1 0.007 15.8 0.1 1.7 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF25229 - 0.02 14.4 0.1 0.074 12.6 0.1 2.0 1 0 0 1 1 1 0 EF hand EF-hand_7 PF13499.6 ORF25229 - 0.18 12.3 0.3 0.38 11.2 0.3 1.8 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_8 PF13833.6 ORF25229 - 0.36 10.7 0.1 0.36 10.7 0.1 1.7 2 0 0 2 2 2 0 EF-hand domain pair LRR_6 PF13516.6 ORF23103 - 0.25 11.5 1.0 29 5.1 0.1 2.7 2 0 0 2 2 2 0 Leucine Rich repeat DUF3978 PF13123.6 ORF200 - 0.021 14.6 2.0 0.058 13.1 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3978) TraI_2_C PF07515.11 ORF200 - 0.023 14.6 0.1 0.043 13.8 0.1 1.4 1 0 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term PG_binding_1 PF01471.18 ORF200 - 0.17 12.1 0.1 6.5 7.1 0.0 2.3 2 0 0 2 2 2 0 Putative peptidoglycan binding domain Cyd_oper_YbgE PF09600.10 ORF19188 - 0.093 13.1 0.1 0.16 12.4 0.1 1.3 1 0 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) Acetyltransf_1 PF00583.25 ORF18847 - 1e-12 48.3 0.0 1.5e-12 47.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF18847 - 5.2e-08 32.9 0.1 7.9e-08 32.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF18847 - 5.6e-08 33.1 0.0 9.9e-08 32.3 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF18847 - 4.1e-05 23.5 0.0 0.00011 22.1 0.0 1.8 1 1 0 1 1 1 1 FR47-like protein HTHP PF11534.8 ORF18847 - 0.00027 21.3 0.0 0.00046 20.6 0.0 1.4 1 0 0 1 1 1 1 Hexameric tyrosine-coordinated heme protein (HTHP) Acetyltransf_9 PF13527.7 ORF18847 - 0.0018 18.3 0.0 0.0034 17.5 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF18847 - 0.019 15.1 0.0 0.035 14.2 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 ORF18847 - 0.043 13.3 0.4 0.052 13.0 0.4 1.2 1 0 0 1 1 1 0 Putative acetyl-transferase Qua1 PF16274.5 ORF18847 - 0.057 13.3 0.1 0.12 12.2 0.1 1.5 1 0 0 1 1 1 0 Qua1 domain SH3_10 PF17902.1 ORF18648 - 0.011 15.7 0.0 1.1 9.4 0.0 2.3 2 0 0 2 2 2 0 SH3 domain PCM1_C PF15717.5 ORF18648 - 0.69 8.5 5.5 13 4.3 0.0 2.0 2 0 0 2 2 2 0 Pericentriolar material 1 C terminus LRR_6 PF13516.6 ORF149596 - 0.25 11.5 1.0 29 5.1 0.1 2.7 2 0 0 2 2 2 0 Leucine Rich repeat Draxin PF15550.6 ORF149323 - 0.035 14.0 6.1 0.04 13.8 6.1 1.1 1 0 0 1 1 1 0 Draxin YdjO PF14169.6 ORF147599 - 0.29 10.9 4.7 0.6 9.9 4.7 1.4 1 0 0 1 1 1 0 Cold-inducible protein YdjO SEC-C PF02810.15 ORF147040 - 1.4 8.9 7.5 0.46 10.5 1.6 2.5 2 0 0 2 2 2 0 SEC-C motif DUF4093 PF13331.6 ORF1437 - 0.17 12.3 0.1 0.37 11.2 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) UPF0239 PF06783.11 ORF14230 - 0.0074 16.4 1.5 0.17 12.0 0.3 2.7 2 1 0 3 3 3 1 Uncharacterised protein family (UPF0239) Cadherin_C_2 PF16492.5 ORF14230 - 0.034 14.9 0.2 1.4 9.7 0.0 2.4 2 1 0 2 2 2 0 Cadherin cytoplasmic C-terminal Sigma_reg_N PF13800.6 ORF14230 - 0.049 13.9 0.1 3.2 8.1 0.1 2.4 2 0 0 2 2 2 0 Sigma factor regulator N-terminal BTB PF00651.31 ORF13777 - 8.2e-21 74.3 1.2 1.3e-20 73.7 1.2 1.3 1 0 0 1 1 1 1 BTB/POZ domain BACK PF07707.15 ORF13777 - 2e-05 24.6 0.2 0.00058 19.9 0.0 2.4 2 0 0 2 2 2 1 BTB And C-terminal Kelch TIL PF01826.17 ORF135568 - 5.3 7.4 10.8 0.64 10.3 4.9 2.3 2 0 0 2 2 2 0 Trypsin Inhibitor like cysteine rich domain ATP-synt_B PF00430.18 ORF134051 - 3.7e-13 49.7 8.2 4.8e-13 49.3 8.2 1.1 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) IFT57 PF10498.9 ORF134051 - 0.0007 18.7 4.8 0.001 18.1 4.8 1.3 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Cystatin PF00031.21 ORF134051 - 0.0012 19.1 3.2 0.0021 18.3 2.7 1.7 1 1 1 2 2 2 1 Cystatin domain ApbA_C PF08546.11 ORF134051 - 0.0091 16.2 1.3 0.013 15.6 1.3 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal AAA_13 PF13166.6 ORF134051 - 0.011 14.4 5.9 0.013 14.2 5.9 1.1 1 0 0 1 1 1 0 AAA domain ARGLU PF15346.6 ORF134051 - 0.023 14.6 7.6 0.031 14.2 7.6 1.1 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 DUF842 PF05811.13 ORF134051 - 0.025 14.3 2.8 0.035 13.8 2.8 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) HAUS6_N PF14661.6 ORF134051 - 0.053 13.1 3.3 0.067 12.8 3.3 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Allexi_40kDa PF05549.11 ORF134051 - 0.096 12.2 2.2 0.12 11.8 2.2 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein T2SSM PF04612.12 ORF134051 - 0.12 12.5 6.0 0.8 9.7 3.0 2.1 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein M AI-2E_transport PF01594.16 ORF134051 - 0.13 11.4 0.0 0.17 11.0 0.0 1.3 1 0 0 1 1 1 0 AI-2E family transporter Seryl_tRNA_N PF02403.22 ORF134051 - 0.14 12.4 12.5 0.083 13.1 9.5 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain LMBR1 PF04791.16 ORF134051 - 0.18 10.7 1.4 0.21 10.5 1.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF763 PF05559.11 ORF134051 - 0.23 10.6 2.7 0.29 10.3 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF763) Fib_alpha PF08702.10 ORF134051 - 0.31 11.2 8.0 0.41 10.8 7.1 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Peptidase_S46 PF10459.9 ORF134051 - 0.33 9.5 9.8 0.39 9.3 9.8 1.0 1 0 0 1 1 1 0 Peptidase S46 V-ATPase_G_2 PF16999.5 ORF134051 - 0.96 9.9 18.2 1.2 9.6 15.9 1.9 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit Jnk-SapK_ap_N PF09744.9 ORF134051 - 1.1 9.4 10.3 1.4 9.1 10.3 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 PdaC PF13739.6 ORF134051 - 2.3 9.3 9.6 2.7 9.0 4.2 2.3 1 1 1 2 2 2 0 Deacetylase PdaC ZYG-11_interact PF05884.12 ORF134051 - 2.7 7.3 4.4 3.5 6.9 4.4 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 TMPIT PF07851.13 ORF134051 - 6.1 6.0 7.0 7.3 5.7 7.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein YtxH PF12732.7 ORF134051 - 7.7 7.1 10.1 27 5.4 10.0 2.1 1 1 0 1 1 1 0 YtxH-like protein YscW PF09619.10 ORF131903 - 9.2e-41 138.5 0.2 1.4e-40 138.0 0.2 1.3 1 0 0 1 1 1 1 Type III secretion system lipoprotein chaperone (YscW) CDC24 PF06395.11 ORF131326 - 0.11 12.8 0.0 0.43 10.9 0.0 2.0 3 0 0 3 3 3 0 CDC24 Calponin DUF993 PF06187.11 ORF131326 - 0.16 10.9 0.0 0.2 10.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF993) LRR_4 PF12799.7 ORF129987 - 4.6e-19 68.2 48.3 3e-07 30.6 3.6 4.2 1 1 5 6 6 6 6 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF129987 - 1.6e-08 34.2 28.1 0.00048 19.8 7.6 4.0 3 1 0 4 4 4 3 Leucine rich repeat LRR_9 PF14580.6 ORF129987 - 1.6e-07 31.0 6.0 0.00088 18.8 2.1 2.1 1 1 1 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 ORF129987 - 6.3e-05 22.7 13.8 0.063 13.4 0.7 4.9 4 0 0 4 4 4 2 Leucine Rich repeat LRR_5 PF13306.6 ORF129987 - 0.019 14.9 6.0 0.066 13.2 4.9 2.1 1 1 1 2 2 2 0 BspA type Leucine rich repeat region (6 copies) SecA_PP_bind PF01043.20 ORF129987 - 0.19 12.4 0.7 0.42 11.3 0.6 1.8 1 1 0 1 1 1 0 SecA preprotein cross-linking domain LRR_1 PF00560.33 ORF129987 - 0.94 10.3 17.5 14 6.7 0.2 5.5 5 1 0 5 5 5 0 Leucine Rich Repeat Ribonuc_red_2_N PF08471.10 ORF128325 - 0.04 14.1 0.2 0.081 13.1 0.0 1.6 2 0 0 2 2 2 0 Class II vitamin B12-dependent ribonucleotide reductase LRR_6 PF13516.6 ORF127805 - 0.25 11.5 1.0 29 5.1 0.1 2.7 2 0 0 2 2 2 0 Leucine Rich repeat Peptidase_S10 PF00450.22 ORF126049 - 6.2e-41 141.2 1.4 7.3e-41 140.9 1.2 1.2 1 1 0 1 1 1 1 Serine carboxypeptidase IL12p40_C PF10420.9 ORF122741 - 0.31 11.6 4.4 0.78 10.3 4.4 1.9 1 1 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus DUF2613 PF11021.8 ORF122741 - 0.91 9.7 0.0 0.91 9.7 0.0 2.9 3 1 1 4 4 4 0 Protein of unknown function (DUF2613) YadA_anchor PF03895.15 ORF122741 - 4.9 7.3 7.4 0.36 11.0 0.6 2.5 1 1 2 3 3 3 0 YadA-like membrane anchor domain PAP1 PF08601.10 ORF122741 - 5.1 6.7 16.7 6.1 6.5 16.7 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 GAPT PF11770.8 ORF119886 - 0.088 12.7 2.0 3.7 7.4 0.1 2.4 2 0 0 2 2 2 0 GRB2-binding adapter (GAPT) Radical_SAM PF04055.21 ORF119886 - 0.24 11.7 1.5 30 4.9 0.0 3.0 3 0 0 3 3 3 0 Radical SAM superfamily SPATA6 PF14909.6 ORF119886 - 0.62 10.2 3.3 60 3.8 0.2 3.1 3 0 0 3 3 3 0 Spermatogenesis-assoc protein 6 Bowman-Birk_leg PF00228.20 ORF119886 - 4.1 7.9 10.3 15 6.1 0.3 3.6 3 0 0 3 3 3 0 Bowman-Birk serine protease inhibitor family PHBC_N PF12551.8 ORF119271 - 0.2 11.4 9.2 3.7 7.4 0.0 3.5 3 0 0 3 3 3 0 Poly-beta-hydroxybutyrate polymerase N terminal FMN_dh PF01070.18 ORF118057 - 2.4e-71 240.6 0.1 2.9e-71 240.3 0.1 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 ORF118057 - 1.1e-09 37.8 1.3 2.5e-07 30.0 0.3 2.7 1 1 1 2 2 2 2 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 ORF118057 - 1.4e-06 28.0 0.0 1.7e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase Glu_synthase PF01645.17 ORF118057 - 2.5e-06 26.9 0.1 1.4e-05 24.4 0.0 1.9 2 0 0 2 2 2 1 Conserved region in glutamate synthase His_biosynth PF00977.21 ORF118057 - 2.3e-05 24.0 0.1 0.0061 16.1 0.0 2.2 1 1 1 2 2 2 2 Histidine biosynthesis protein DHO_dh PF01180.21 ORF118057 - 5.1e-05 22.6 0.2 0.012 14.9 0.1 2.1 1 1 1 2 2 2 2 Dihydroorotate dehydrogenase ThiG PF05690.14 ORF118057 - 0.00021 20.7 0.1 0.078 12.3 0.0 2.2 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 ORF118057 - 0.0014 17.7 0.1 0.13 11.3 0.0 2.1 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.12 ORF118057 - 0.014 14.9 0.0 1.3 8.5 0.0 2.3 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator DHDPS PF00701.22 ORF118057 - 0.12 11.1 0.0 0.17 10.6 0.0 1.2 1 0 0 1 1 1 0 Dihydrodipicolinate synthetase family Acetyltransf_1 PF00583.25 ORF1179 - 1.3e-10 41.5 0.0 2.4e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF1179 - 3.8e-08 33.6 0.0 5.6e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF1179 - 2.5e-06 27.6 0.0 3.5e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF1179 - 0.00068 19.6 0.0 0.0011 18.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GAF_2 PF13185.6 ORF115778 - 0.0015 18.8 0.0 0.67 10.3 0.0 2.1 2 0 0 2 2 2 2 GAF domain Hepatitis_core PF00906.20 ORF115778 - 0.17 11.4 0.1 0.2 11.2 0.1 1.1 1 0 0 1 1 1 0 Hepatitis core antigen cNMP_binding PF00027.29 ORF11184 - 2.7e-18 65.8 0.2 1.5e-11 44.2 0.1 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain DNA_pol3_a_NII PF11490.8 ORF11184 - 0.042 13.7 1.7 1.4 8.9 0.3 2.2 1 1 1 2 2 2 0 DNA polymerase III polC-type N-terminus II DUF2483 PF10656.9 ORF111555 - 0.011 15.9 0.1 0.024 14.8 0.1 1.7 1 0 0 1 1 1 0 Hypothetical protein of unknown function (DUF2483) FAM76 PF16046.5 ORF111555 - 0.015 14.7 16.3 0.034 13.5 16.3 1.6 1 1 0 1 1 1 0 FAM76 protein GBR2_CC PF18455.1 ORF111555 - 0.019 15.1 0.1 0.082 13.0 0.1 2.1 1 0 0 1 1 1 0 Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain VIT1 PF01988.19 ORF111555 - 0.07 13.0 4.2 0.11 12.4 4.2 1.5 1 1 0 1 1 1 0 VIT family DUF1854 PF08909.11 ORF111555 - 0.26 11.1 3.7 0.42 10.4 2.3 2.2 1 1 2 3 3 3 0 Domain of unknown function (DUF1854) Tubulin_C PF03953.17 ORF111555 - 0.42 10.8 3.1 0.55 10.4 0.4 2.2 1 1 1 2 2 2 0 Tubulin C-terminal domain Adhesin_P1_N PF18652.1 ORF111555 - 0.62 10.1 5.3 0.99 9.5 0.4 2.5 1 1 2 3 3 3 0 Adhesin P1 N-terminal domain O-antigen_lig PF13425.6 ORF111555 - 1.1 7.9 10.9 1.3 7.7 10.9 1.3 1 1 0 1 1 1 0 O-antigen ligase like membrane protein Sina PF03145.16 ORF109497 - 0.00036 20.6 14.0 0.0014 18.6 6.7 2.1 1 1 1 2 2 2 2 Seven in absentia protein family zf-TRAF PF02176.18 ORF109497 - 0.00039 21.1 21.1 0.0089 16.7 9.7 3.1 1 1 2 3 3 3 2 TRAF-type zinc finger DM PF00751.18 ORF109497 - 0.85 9.6 15.9 0.63 10.0 5.6 2.7 1 1 1 2 2 2 0 DM DNA binding domain ATP-synt_C PF00137.21 ORF106931 - 7.9e-33 112.6 32.0 8.6e-20 70.9 12.3 2.2 2 0 0 2 2 2 2 ATP synthase subunit C GerA PF03323.13 ORF106931 - 1.6 7.1 4.3 4.6 5.6 0.3 2.4 2 0 0 2 2 2 0 Bacillus/Clostridium GerA spore germination protein Carb_kinase PF01256.17 ORF101828 - 3.3e-13 49.7 0.0 4.4e-13 49.3 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate kinase LRR_6 PF13516.6 ORF10105 - 0.25 11.5 1.0 29 5.1 0.1 2.7 2 0 0 2 2 2 0 Leucine Rich repeat PPTA PF01239.22 NODE_37652_length_565_cov_2.305660_g30385_i0forward_frame_1 - 0.052 13.3 0.2 0.052 13.3 0.2 2.0 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat Peptidase_U40 PF10464.9 NODE_37651_length_565_cov_2.490566_g30384_i0reverse_frame_1 - 0.046 13.4 0.0 0.079 12.6 0.0 1.3 1 0 0 1 1 1 0 Peptidase U40 DUF4050 PF13259.6 NODE_37626_length_565_cov_131.639623_g30362_i0reverse_frame_1 - 0.35 11.2 4.8 0.49 10.7 4.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4050) CcmD PF04995.14 NODE_37621_length_565_cov_158.145283_g14262_i1reverse_frame_1 - 2.7 8.2 5.1 4.8 7.3 0.4 2.3 2 0 0 2 2 2 0 Heme exporter protein D (CcmD) Peptidase_M3 PF01432.20 NODE_37614_length_565_cov_268.979245_g30351_i0reverse_frame_1 - 1.9e-21 76.9 0.0 2.1e-21 76.7 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 GCM PF03615.15 NODE_37594_length_566_cov_3.472693_g30331_i0reverse_frame_1 - 0.27 11.1 2.4 0.34 10.8 1.8 1.4 1 1 0 1 1 1 0 GCM motif protein CbiA PF01656.23 NODE_37590_length_566_cov_64.455744_g30327_i0forward_frame_1 - 0.025 14.6 0.3 0.04 14.0 0.3 1.4 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain TraI_2B PF18340.1 NODE_37590_length_566_cov_64.455744_g30327_i0forward_frame_1 - 0.098 12.7 0.7 0.27 11.4 0.7 1.7 1 0 0 1 1 1 0 DNA relaxase TraI 2B/2B-like domain DSPc PF00782.20 NODE_37587_length_566_cov_78.222222_g30325_i0reverse_frame_1 - 1.6e-06 27.9 0.1 2.9e-06 27.1 0.0 1.5 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_37587_length_566_cov_78.222222_g30325_i0reverse_frame_1 - 0.0055 16.3 0.0 0.0078 15.8 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 NODE_37587_length_566_cov_78.222222_g30325_i0reverse_frame_1 - 0.047 13.8 0.0 0.079 13.1 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate MFS_1 PF07690.16 NODE_37572_length_566_cov_137.058380_g30312_i0forward_frame_1 - 2.7e-08 33.1 0.5 3.1e-08 33.0 0.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily LLC1 PF14945.6 NODE_37561_length_566_cov_487.389831_g29832_i1forward_frame_1 - 1.9e-07 31.7 1.4 1.2e-06 29.1 1.4 2.2 1 1 0 1 1 1 1 Normal lung function maintenance, Low in Lung Cancer 1 protein Tubulin PF00091.25 NODE_37557_length_566_cov_1922.431262_g30301_i0forward_frame_1 - 7.3e-56 189.5 0.0 8e-56 189.4 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 NODE_37557_length_566_cov_1922.431262_g30301_i0forward_frame_1 - 0.0097 15.6 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Tubulin domain Tubulin_2 PF13809.6 NODE_37557_length_566_cov_1922.431262_g30301_i0forward_frame_1 - 0.042 13.0 0.0 0.052 12.7 0.0 1.1 1 0 0 1 1 1 0 Tubulin like DA1-like PF12315.8 NODE_37553_length_567_cov_2.605263_g30297_i0reverse_frame_1 - 0.17 11.2 0.5 0.53 9.6 0.4 1.7 1 1 1 2 2 2 0 Protein DA1 S_100 PF01023.19 NODE_37553_length_567_cov_2.605263_g30297_i0forward_frame_1 - 0.17 11.6 0.6 0.28 10.9 0.6 1.2 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain HTH_1 PF00126.27 NODE_37505_length_568_cov_1.936210_g30255_i0forward_frame_3 - 3.7e-13 49.2 0.2 5.8e-13 48.6 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 NODE_37505_length_568_cov_1.936210_g30255_i0forward_frame_3 - 0.022 14.6 0.1 0.047 13.5 0.1 1.6 1 1 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DELLA PF12041.8 NODE_37505_length_568_cov_1.936210_g30255_i0forward_frame_3 - 0.12 12.3 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator DELLA protein N terminal DUF3176 PF11374.8 NODE_37505_length_568_cov_1.936210_g30255_i0forward_frame_2 - 0.11 12.7 0.3 0.17 12.1 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3176) HTH_1 PF00126.27 NODE_37504_length_568_cov_1.936210_g30254_i0forward_frame_3 - 3.5e-13 49.3 0.2 5.8e-13 48.6 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 NODE_37504_length_568_cov_1.936210_g30254_i0forward_frame_3 - 0.022 14.6 0.1 0.047 13.5 0.1 1.6 1 1 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DELLA PF12041.8 NODE_37504_length_568_cov_1.936210_g30254_i0forward_frame_3 - 0.12 12.3 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator DELLA protein N terminal HCV_NS5a PF01506.19 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_3 - 0.023 14.6 1.1 8.4 6.4 0.1 2.9 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a protein membrane anchor DUF2951 PF11166.8 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 0.0033 17.6 5.0 0.0033 17.6 5.0 3.9 1 1 3 4 4 4 1 Protein of unknown function (DUF2951) Fib_alpha PF08702.10 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 0.05 13.8 30.9 0.13 12.4 13.6 2.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Lipoprotein_20 PF13942.6 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 0.15 12.0 25.6 0.47 10.4 9.1 3.9 1 1 3 4 4 4 0 YfhG lipoprotein Muted PF14942.6 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 1.9 8.8 28.8 0.57 10.5 11.4 2.3 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein Golgin_A5 PF09787.9 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 2.5 7.5 30.3 1.3 8.4 17.6 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 THOC7 PF05615.13 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 3.6 7.9 26.4 0.078 13.3 6.5 3.0 1 1 2 3 3 3 0 Tho complex subunit 7 UPF0242 PF06785.11 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 4.1 7.5 32.7 1.2 9.2 15.5 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Jnk-SapK_ap_N PF09744.9 NODE_37497_length_568_cov_68.071295_g30247_i0forward_frame_2 - 6.4 7.0 34.5 5.7 7.1 17.7 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 CPSase_L_D3 PF02787.19 NODE_37494_length_568_cov_78.018762_g30244_i0reverse_frame_3 - 0.011 16.1 0.5 0.027 14.8 0.5 1.8 1 1 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Peptidase_C14 PF00656.22 NODE_37486_length_568_cov_102.879925_g30236_i0forward_frame_3 - 6.5e-10 39.4 0.1 9.1e-10 38.9 0.1 1.1 1 0 0 1 1 1 1 Caspase domain RL PF17797.1 NODE_37453_length_569_cov_3.425094_g30207_i0reverse_frame_3 - 0.073 13.0 0.5 0.12 12.4 0.5 1.3 1 0 0 1 1 1 0 RL domain RB_A PF01858.17 NODE_37453_length_569_cov_3.425094_g30207_i0reverse_frame_2 - 2.6e-18 66.6 0.9 4.3e-18 65.8 0.1 1.7 1 1 1 2 2 2 1 Retinoblastoma-associated protein A domain RB_B PF01857.20 NODE_37453_length_569_cov_3.425094_g30207_i0reverse_frame_2 - 4.7e-05 23.4 0.1 0.00013 22.0 0.0 1.8 2 0 0 2 2 2 1 Retinoblastoma-associated protein B domain DUF2584 PF10763.9 NODE_37453_length_569_cov_3.425094_g30207_i0reverse_frame_2 - 0.086 13.0 0.1 0.22 11.7 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2584) HbrB PF08539.11 NODE_37450_length_569_cov_4.588015_g30204_i0forward_frame_3 - 0.15 12.0 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 HbrB-like Hydrolase_6 PF13344.6 NODE_37450_length_569_cov_4.588015_g30204_i0forward_frame_2 - 8e-23 80.5 0.0 1.2e-22 79.9 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 NODE_37450_length_569_cov_4.588015_g30204_i0forward_frame_2 - 0.00082 19.7 0.2 0.028 14.7 0.0 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF1190 PF06693.11 NODE_37449_length_569_cov_4.589888_g30203_i0reverse_frame_3 - 9.6e-21 74.8 7.8 9.6e-21 74.8 7.8 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1190) TB PF00683.17 NODE_37449_length_569_cov_4.589888_g30203_i0forward_frame_2 - 6.3 6.6 8.0 6.4 6.6 2.6 2.4 2 0 0 2 2 2 0 TB domain MCU PF04678.13 NODE_37445_length_569_cov_45.466292_g30199_i0reverse_frame_2 - 3.2 7.8 8.7 5.5 7.1 8.7 1.2 1 0 0 1 1 1 0 Mitochondrial calcium uniporter Cytochrom_C552 PF02335.15 NODE_37427_length_569_cov_125.224719_g19526_i1forward_frame_2 - 0.26 10.2 0.0 0.31 9.9 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c552 SelK_SelG PF10961.8 NODE_37424_length_569_cov_151.786517_g30179_i0forward_frame_3 - 0.23 12.1 2.3 0.62 10.7 1.0 2.1 1 1 1 2 2 2 0 Selenoprotein SelK_SelG Cadherin_C_2 PF16492.5 NODE_37410_length_569_cov_304.288390_g30165_i0reverse_frame_3 - 0.058 14.1 0.5 0.12 13.1 0.5 1.5 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal DUF423 PF04241.15 NODE_37410_length_569_cov_304.288390_g30165_i0forward_frame_2 - 1.5 9.1 4.7 0.86 9.8 1.4 2.2 1 1 2 3 3 3 0 Protein of unknown function (DUF423) Vanabin-2 PF11437.8 NODE_37391_length_570_cov_3.373832_g30150_i0forward_frame_2 - 0.016 15.3 0.4 0.016 15.3 0.4 1.8 2 0 0 2 2 2 0 Vanadium-binding protein 2 CRR7 PF12095.8 NODE_37388_length_570_cov_12.142056_g30147_i0forward_frame_2 - 0.09 13.2 0.6 0.23 11.9 0.6 1.7 1 0 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 RuvB_N PF05496.12 NODE_37387_length_570_cov_23.971963_g30146_i0reverse_frame_3 - 0.04 13.7 0.0 0.054 13.2 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain WSK PF03832.13 NODE_37382_length_570_cov_76.388785_g30143_i0forward_frame_2 - 0.042 13.5 0.0 0.12 12.1 0.0 1.7 1 0 0 1 1 1 0 WSK motif DUF1211 PF06736.11 NODE_37379_length_570_cov_80.414953_g30140_i0reverse_frame_3 - 0.09 13.2 1.7 0.17 12.4 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) LRR_6 PF13516.6 NODE_37370_length_570_cov_98.226168_g30131_i0reverse_frame_3 - 1e-05 25.2 0.6 0.16 12.1 0.2 3.7 3 0 0 3 3 3 2 Leucine Rich repeat LRR_4 PF12799.7 NODE_37370_length_570_cov_98.226168_g30131_i0reverse_frame_3 - 0.00084 19.7 0.2 0.34 11.4 0.6 3.1 2 1 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_37370_length_570_cov_98.226168_g30131_i0reverse_frame_3 - 0.021 15.3 3.7 0.78 10.5 0.9 3.9 3 3 0 3 3 3 0 Leucine Rich Repeat TPR_4 PF07721.14 NODE_37357_length_570_cov_207.594393_g30119_i0forward_frame_3 - 0.049 14.3 0.7 0.15 12.8 0.7 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat RRM_1 PF00076.22 NODE_37353_length_570_cov_271.295327_g30115_i0forward_frame_3 - 1.2e-19 69.9 0.0 1.7e-19 69.4 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 NODE_37353_length_570_cov_271.295327_g30115_i0forward_frame_3 - 0.0041 17.1 0.0 0.0097 15.9 0.0 1.6 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif PPR PF01535.20 NODE_37349_length_570_cov_399.078505_g30112_i0reverse_frame_2 - 0.0093 16.1 0.0 7.3 7.1 0.0 3.1 3 0 0 3 3 3 2 PPR repeat Phage_lysozyme PF00959.19 ORF99853 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF99853 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) CxC1 PF18802.1 ORF9852 - 0.035 14.2 2.8 0.04 14.1 1.6 1.7 1 1 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases DUF809 PF05663.11 ORF9852 - 0.42 10.7 4.4 0.17 12.0 1.9 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF809) EF-hand_1 PF00036.32 ORF98209 - 1.3e-32 108.9 18.5 4.7e-09 35.1 0.8 4.3 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF98209 - 5.1e-28 97.3 14.6 9.3e-14 51.6 4.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF98209 - 2.3e-24 83.2 13.5 5.8e-08 32.1 0.2 4.9 4 1 1 5 5 5 4 EF-hand domain EF-hand_8 PF13833.6 ORF98209 - 7.7e-23 80.1 15.1 3.3e-12 46.1 1.7 3.6 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF98209 - 3.7e-14 51.5 16.1 1.9e-05 23.9 0.4 4.6 4 1 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF98209 - 9.5e-11 41.9 1.7 5.6e-05 23.4 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF98209 - 3.2e-07 30.2 8.3 0.014 15.3 0.3 3.8 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF98209 - 0.00043 20.6 4.0 0.081 13.3 1.0 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_14 PF17959.1 ORF98209 - 0.0005 20.4 7.0 0.0022 18.3 0.9 2.9 2 2 1 3 3 3 1 EF-hand domain SurA_N_3 PF13624.6 ORF98209 - 0.001 18.9 4.9 0.058 13.2 2.6 2.1 2 0 0 2 2 2 2 SurA N-terminal domain SurA_N_2 PF13623.6 ORF98209 - 0.0029 17.5 2.9 0.92 9.4 0.4 2.9 2 1 0 2 2 2 2 SurA N-terminal domain Peptidase_S46 PF10459.9 ORF98209 - 0.0029 16.3 3.4 0.0029 16.4 3.4 1.1 1 0 0 1 1 1 1 Peptidase S46 DUF1002 PF06207.11 ORF98209 - 0.023 14.2 3.4 0.72 9.3 0.2 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1002) BDV_P40 PF06407.11 ORF98209 - 0.025 13.7 0.1 0.039 13.1 0.1 1.4 1 1 0 1 1 1 0 Borna disease virus P40 protein UPF0154 PF03672.13 ORF98209 - 0.063 13.3 3.0 0.62 10.1 0.0 3.1 4 0 0 4 4 3 0 Uncharacterised protein family (UPF0154) Acetyltransf_11 PF13720.6 ORF98209 - 0.12 12.9 0.3 0.39 11.2 0.2 2.0 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AAA_assoc_C PF09821.9 ORF98209 - 0.19 12.3 6.3 0.26 11.8 0.2 2.7 2 1 1 3 3 3 0 C-terminal AAA-associated domain DUF1036 PF06282.11 ORF96724 - 0.0041 17.6 0.1 0.008 16.7 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1036) AAA_34 PF13872.6 ORF93715 - 0.13 11.2 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 Rad51 PF08423.11 ORF93168 - 0.17 11.1 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Rad51 PMD PF10536.9 ORF93149 - 0.21 10.7 1.3 0.25 10.4 1.3 1.1 1 0 0 1 1 1 0 Plant mobile domain Ion_trans PF00520.31 ORF91265 - 0.015 14.5 4.2 0.023 13.9 4.2 1.3 1 0 0 1 1 1 0 Ion transport protein DUF4501 PF14946.6 ORF89919 - 8.4 6.4 9.2 1.2 9.2 5.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4501) Response_reg PF00072.24 ORF89822 - 6.4e-20 71.4 0.1 8.4e-20 71.0 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain DAP10 PF07213.11 ORF8921 - 0.11 12.5 1.0 0.31 11.0 0.0 2.1 2 0 0 2 2 2 0 DAP10 membrane protein Helicase_C PF00271.31 ORF87209 - 2.8e-05 24.4 0.0 3.9e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain zf-RING_2 PF13639.6 ORF85771 - 5.5e-08 33.0 15.4 5.5e-08 33.0 15.4 2.7 2 1 1 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF85771 - 1.8e-05 24.4 5.1 1.8e-05 24.4 5.1 2.5 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF85771 - 2.5e-05 24.0 15.5 6.6e-05 22.7 15.5 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF85771 - 0.00031 21.0 13.7 0.00031 21.0 13.7 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF85771 - 0.0085 15.9 15.7 0.049 13.5 14.6 2.5 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF85771 - 0.29 11.2 17.5 0.095 12.7 9.0 2.9 2 0 0 2 2 2 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF85771 - 0.3 11.2 10.1 0.66 10.1 10.1 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger DAPDH_C PF16654.5 ORF83576 - 0.049 13.5 0.2 0.079 12.8 0.2 1.4 1 0 0 1 1 1 0 Diaminopimelic acid dehydrogenase C-terminal domain DUF4349 PF14257.6 ORF83576 - 0.16 11.4 0.1 0.22 10.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Phage_lysozyme PF00959.19 ORF8357 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF8357 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) ROK PF00480.20 ORF82262 - 2.5e-54 184.8 8.7 2.8e-54 184.6 8.7 1.0 1 0 0 1 1 1 1 ROK family DUF2173 PF09941.9 ORF82262 - 0.087 13.1 0.3 0.47 10.8 0.1 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2173) Phage_lysozyme PF00959.19 ORF81524 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF81524 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) RabGAP-TBC PF00566.18 ORF80184 - 8.8e-12 45.1 2.0 1.2e-11 44.6 2.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Phage_lysozyme PF00959.19 ORF78458 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF78458 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Phage_lysozyme PF00959.19 ORF7716 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF7716 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Snf7 PF03357.21 ORF76751 - 3.9e-09 36.3 14.3 3.9e-09 36.3 14.3 1.3 2 0 0 2 2 2 1 Snf7 Ist1 PF03398.14 ORF76751 - 0.013 15.4 3.6 0.023 14.6 3.6 1.4 1 0 0 1 1 1 0 Regulator of Vps4 activity in the MVB pathway FbpA PF05833.11 ORF76751 - 0.018 13.8 5.2 0.048 12.4 0.2 2.1 1 1 1 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) CorA PF01544.18 ORF76751 - 0.026 13.8 0.4 0.044 13.1 0.4 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein WXG100 PF06013.12 ORF76751 - 4 7.7 9.8 4.5 7.6 0.1 3.8 1 1 3 4 4 4 0 Proteins of 100 residues with WXG PAP2 PF01569.21 ORF74739 - 0.043 13.6 0.8 0.19 11.5 0.6 1.9 1 1 1 2 2 2 0 PAP2 superfamily SNARE_assoc PF09335.11 ORF73346 - 4.8e-11 43.2 6.9 7.6e-11 42.6 6.9 1.3 1 0 0 1 1 1 1 SNARE associated Golgi protein YqjK PF13997.6 ORF73346 - 0.038 14.2 0.5 1.9 8.8 0.1 2.6 2 0 0 2 2 2 0 YqjK-like protein SET PF00856.28 ORF72954 - 2.9e-09 37.5 0.3 0.0016 18.9 0.1 3.1 2 1 0 2 2 2 2 SET domain DUF4298 PF14131.6 ORF72954 - 0.12 12.3 0.0 3.5 7.7 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) Acyl_transf_3 PF01757.22 ORF72925 - 2.1e-11 43.5 13.7 2.5e-11 43.2 13.7 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF423 PF04241.15 ORF72925 - 7.4 6.9 8.0 5.5 7.3 0.7 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF423) Frataxin_Cyay PF01491.16 ORF7224 - 0.15 12.2 0.1 0.23 11.5 0.1 1.3 1 0 0 1 1 1 0 Frataxin-like domain Ion_trans PF00520.31 ORF69901 - 0.015 14.5 4.2 0.023 13.9 4.2 1.3 1 0 0 1 1 1 0 Ion transport protein cNMP_binding PF00027.29 ORF69702 - 6.2e-11 42.2 0.0 4e-07 30.0 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain CSD PF00313.22 ORF67741 - 2.5e-12 46.5 0.1 5.5e-06 26.1 0.0 3.3 3 1 0 3 3 3 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF67741 - 0.026 14.2 0.0 0.069 12.9 0.0 1.7 1 0 0 1 1 1 0 Ribonuclease B OB domain zf-CCCH PF00642.24 ORF67741 - 1.3 9.0 5.5 4.8 7.2 0.4 3.1 3 1 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Phage_lysozyme PF00959.19 ORF66126 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF66126 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks126.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks126.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks126.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks126.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:04:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AAA_31 PF13614.6 ORF62409 - 0.06 13.3 0.6 0.11 12.4 0.6 1.5 1 0 0 1 1 1 0 AAA domain RHH_1 PF01402.21 ORF62409 - 0.17 11.9 3.7 16 5.6 0.1 3.3 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family Phage_lysozyme PF00959.19 ORF59866 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF59866 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Roc PF08477.13 ORF5974 - 4.4e-09 36.6 0.0 7.4e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF5974 - 4.4e-07 29.6 0.0 6.7e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Ras family Arf PF00025.21 ORF5974 - 1.2e-06 28.1 0.0 1.5e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF5974 - 0.00025 20.5 0.0 0.00042 19.8 0.0 1.4 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region PduV-EutP PF10662.9 ORF5974 - 0.11 12.3 0.0 1.3 8.8 0.0 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation PUB PF09409.10 ORF54857 - 6.7e-07 29.2 0.0 1.2e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 PUB domain UIM PF02809.20 ORF54857 - 0.1 12.6 4.3 0.18 11.8 4.3 1.5 1 0 0 1 1 1 0 Ubiquitin interaction motif PsbU PF06514.11 ORF4888 - 2.5e-24 85.1 0.1 3.6e-24 84.6 0.1 1.2 1 0 0 1 1 1 1 Photosystem II 12 kDa extrinsic protein (PsbU) HHH_3 PF12836.7 ORF4888 - 0.0078 16.5 0.0 0.02 15.1 0.0 1.7 1 1 0 1 1 1 1 Helix-hairpin-helix motif DUF543 PF04418.12 ORF4888 - 0.17 11.9 0.6 0.75 9.8 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF543) Tad PF13400.6 ORF4888 - 5.5 7.4 13.3 0.7 10.2 7.7 2.1 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Phage_lysozyme PF00959.19 ORF48707 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF48707 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) HTH_33 PF13592.6 ORF44540 - 0.095 12.4 0.1 6.2 6.6 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn helix DUF2554 PF10829.8 ORF44540 - 0.76 10.2 3.1 0.48 10.8 1.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2554) GnsAB_toxin PF08178.11 ORF44053 - 0.028 14.3 0.7 0.092 12.7 0.7 1.9 1 0 0 1 1 1 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system RNase_J_C PF17770.1 ORF44053 - 0.12 13.4 1.2 0.4 11.8 1.2 1.9 1 0 0 1 1 1 0 Ribonuclease J C-terminal domain EnY2 PF10163.9 ORF44053 - 0.16 12.4 2.7 0.6 10.5 0.1 2.5 2 1 0 2 2 2 0 Transcription factor e(y)2 PGK PF00162.19 ORF41308 - 6.8e-54 183.3 1.5 7.6e-54 183.1 1.5 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF5607 PF18355.1 ORF38816 - 0.52 10.8 2.1 6.5 7.3 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF5607) PPR_2 PF13041.6 ORF37356 - 4.7e-14 52.3 0.1 3.2e-12 46.4 0.0 3.4 2 2 3 5 5 5 2 PPR repeat family PPR PF01535.20 ORF37356 - 3.2e-11 42.7 1.3 0.0025 17.9 0.0 4.3 4 0 0 4 4 4 2 PPR repeat PPR_3 PF13812.6 ORF37356 - 5e-09 36.1 0.1 7.9e-07 29.1 0.0 2.8 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF37356 - 7.1e-09 35.2 0.1 0.00014 21.5 0.0 2.6 2 0 0 2 2 2 2 PPR repeat PPR_long PF17177.4 ORF37356 - 9.4e-07 28.4 0.1 1.5e-06 27.7 0.0 1.4 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP TPR_7 PF13176.6 ORF37356 - 0.00026 20.8 0.0 3.4 7.9 0.0 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF37356 - 0.0093 16.5 1.1 1.8 9.1 0.0 3.0 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF37356 - 0.0099 16.6 3.8 2.1 9.4 0.2 3.7 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF37356 - 0.13 12.6 0.3 1 9.7 0.0 2.5 1 1 2 3 3 3 0 Tetratricopeptide repeat PNP_phzG_C PF10590.9 ORF36531 - 0.25 11.5 2.5 0.65 10.1 2.5 1.7 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region adh_short_C2 PF13561.6 ORF35506 - 5.4e-63 212.7 0.1 6e-63 212.5 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF35506 - 5.9e-05 22.6 0.0 6.9e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Shal-type PF11601.8 ORF35495 - 0.1 12.2 1.4 0.15 11.6 0.3 1.9 2 0 0 2 2 2 0 Shal-type voltage-gated potassium channels, N-terminal zf-4CXXC_R1 PF10497.9 ORF35219 - 0.59 10.4 4.5 0.74 10.1 0.8 2.2 2 0 0 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Phage_lysozyme PF00959.19 ORF35078 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF35078 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Pkinase PF00069.25 ORF33575 - 8.7e-42 143.3 0.0 1e-41 143.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33575 - 2e-25 89.6 0.0 2.5e-25 89.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF33575 - 5.1e-12 45.7 0.0 6e-12 45.5 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF33575 - 1.4e-08 34.0 0.0 2e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF33575 - 0.019 14.9 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF33575 - 0.019 14.5 0.0 0.047 13.3 0.0 1.6 2 0 0 2 2 2 0 RIO1 family Seadorna_VP7 PF07387.11 ORF33575 - 0.027 13.5 0.0 0.039 13.0 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Kdo PF06293.14 ORF33575 - 0.09 12.1 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF33575 - 0.16 11.5 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Amidohydro_3 PF07969.11 ORF31722 - 0.01 15.4 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 ORF31722 - 0.011 15.1 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase family LRIF1 PF15741.5 ORF30113 - 0.12 10.9 0.1 0.17 10.4 0.1 1.1 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 Ank_4 PF13637.6 ORF26914 - 4.2e-22 78.2 0.5 2.3e-11 44.0 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF26914 - 3.9e-15 54.4 0.1 1e-06 28.6 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank_2 PF12796.7 ORF26914 - 4.2e-14 52.9 0.1 7.7e-14 52.1 0.1 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF26914 - 3.8e-13 49.2 0.4 1.5e-06 28.3 0.1 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF26914 - 8.5e-11 41.9 0.1 1.5e-06 28.4 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Endothelin PF00322.17 ORF24705 - 0.05 13.2 3.4 0.15 11.7 3.4 1.8 1 0 0 1 1 1 0 Endothelin family p25-alpha PF05517.12 ORF2229 - 0.11 12.7 0.1 0.17 12.1 0.1 1.2 1 0 0 1 1 1 0 p25-alpha RecR PF02132.15 ORF22062 - 0.023 14.2 1.3 0.12 12.0 0.1 2.3 2 0 0 2 2 2 0 RecR protein FGAR-AT_N PF18076.1 ORF2190 - 0.21 11.6 1.4 0.36 10.8 1.4 1.3 1 0 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase N-terminal VDE PF07137.11 ORF20795 - 0.00087 18.9 18.2 0.028 13.9 5.0 2.2 2 0 0 2 2 2 2 VDE lipocalin domain Menin PF05053.13 ORF20522 - 0.45 8.8 5.3 0.52 8.6 5.3 1.0 1 0 0 1 1 1 0 Menin Pro_isomerase PF00160.21 ORF19920 - 9.2e-41 139.7 0.0 1.1e-40 139.5 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF3613 PF12266.8 ORF19169 - 0.062 13.1 0.9 0.13 12.1 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3613) Mak10 PF04112.13 ORF19149 - 0.25 10.8 0.0 0.34 10.4 0.0 1.1 1 0 0 1 1 1 0 Mak10 subunit, NatC N(alpha)-terminal acetyltransferase DUF5607 PF18355.1 ORF18598 - 0.52 10.8 2.1 6.5 7.3 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF5607) Methyltransf_31 PF13847.6 ORF16873 - 7.6e-11 42.0 0.0 8.5e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF16873 - 4e-10 40.3 0.0 6.2e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF16873 - 1.8e-09 37.6 0.0 2.2e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF16873 - 5e-08 33.5 0.0 7.8e-08 32.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF16873 - 4.9e-06 27.2 0.0 8.3e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF16873 - 5.9e-05 22.7 0.0 9.2e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF16873 - 0.00011 22.2 0.1 0.00016 21.7 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 ORF16873 - 0.0016 17.6 0.0 0.0025 16.9 0.0 1.3 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.13 ORF16873 - 0.0076 15.7 0.0 0.01 15.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.18 ORF16873 - 0.013 14.9 0.0 0.02 14.2 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family MetW PF07021.12 ORF16873 - 0.016 14.8 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW CMAS PF02353.20 ORF16873 - 0.032 13.5 0.0 0.048 12.9 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase PCMT PF01135.19 ORF16873 - 0.048 13.4 0.0 0.076 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N6_N4_Mtase PF01555.18 ORF16873 - 0.048 13.4 0.0 0.08 12.6 0.0 1.3 1 0 0 1 1 1 0 DNA methylase Methyltransf_18 PF12847.7 ORF16873 - 0.073 13.0 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_9 PF08003.11 ORF16873 - 0.075 11.9 0.0 0.1 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) AdoMet_MTase PF07757.13 ORF16873 - 0.087 13.2 0.2 0.21 12.0 0.2 1.7 1 1 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase zf-CCCH PF00642.24 ORF1524 - 2.3e-06 27.3 2.0 3.9e-06 26.6 2.0 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF1524 - 0.00014 21.8 8.6 0.00014 21.8 8.6 1.8 2 0 0 2 2 2 1 Zinc finger domain zf-CCCH_4 PF18044.1 ORF1524 - 0.00049 19.8 3.3 0.00089 19.0 3.3 1.5 1 0 0 1 1 1 1 CCCH-type zinc finger Torus PF16131.5 ORF1524 - 0.039 14.6 0.3 0.13 12.9 0.8 1.5 2 0 0 2 2 2 0 Torus domain Herpes_UL7 PF01677.16 ORF150326 - 0.11 12.2 0.3 7.5 6.2 0.5 2.2 2 0 0 2 2 2 0 Herpesvirus UL7 like AbfS_sensor PF18225.1 ORF144970 - 0.13 12.2 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain Phage_lysozyme PF00959.19 ORF143082 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF143082 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Ion_trans PF00520.31 ORF143028 - 0.023 13.9 14.8 0.039 13.2 14.8 1.3 1 0 0 1 1 1 0 Ion transport protein Pox_A9 PF04835.12 ORF143028 - 0.032 14.3 1.6 0.032 14.3 1.6 2.0 2 0 0 2 2 2 0 A9 protein conserved region DNA_binding_2 PF13724.6 ORF143028 - 0.068 13.6 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 DNA-binding domain PKD_channel PF08016.12 ORF143028 - 0.2 10.3 11.4 0.29 9.8 11.4 1.2 1 0 0 1 1 1 0 Polycystin cation channel OppC_N PF12911.7 ORF143028 - 0.69 9.9 3.3 2.8 8.0 0.4 2.3 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C FGE-sulfatase PF03781.16 ORF143014 - 7.3e-28 97.8 4.7 8.5e-28 97.6 4.7 1.1 1 0 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 SDH_alpha PF03313.15 ORF14285 - 0.41 10.3 5.3 0.54 9.9 5.3 1.1 1 0 0 1 1 1 0 Serine dehydratase alpha chain DAP10 PF07213.11 ORF14285 - 3.3 7.7 7.5 0.38 10.7 3.1 1.7 2 0 0 2 2 2 0 DAP10 membrane protein FA_desaturase PF00487.24 ORF141081 - 2e-09 37.7 5.7 2.8e-09 37.2 5.7 1.1 1 0 0 1 1 1 1 Fatty acid desaturase Imm_superinfect PF14373.6 ORF141081 - 0.041 13.8 1.1 0.095 12.6 0.4 2.0 2 0 0 2 2 2 0 Superinfection immunity protein PPR_2 PF13041.6 ORF140042 - 7.7e-21 74.0 0.0 8.6e-06 25.9 0.0 3.3 2 1 1 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF140042 - 1.4e-14 53.8 0.0 2.6e-05 24.2 0.0 3.1 2 1 1 3 3 3 3 Pentatricopeptide repeat domain PPR PF01535.20 ORF140042 - 2.5e-12 46.1 1.3 7.2e-05 22.8 0.0 4.2 4 0 0 4 4 4 3 PPR repeat PPR_1 PF12854.7 ORF140042 - 0.00023 20.8 1.0 0.39 10.4 0.0 4.4 6 0 0 6 6 6 1 PPR repeat PPR_long PF17177.4 ORF140042 - 0.11 11.9 0.0 0.4 10.0 0.0 1.7 1 1 1 2 2 2 0 Pentacotripeptide-repeat region of PRORP TetR_C_20 PF17925.1 ORF140042 - 0.13 12.6 0.1 17 5.7 0.0 2.5 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Fer4_21 PF14697.6 ORF140042 - 1.6 8.9 15.6 1.5 9.0 6.3 2.9 2 2 1 3 3 3 0 4Fe-4S dicluster domain Vac_Fusion PF02346.16 ORF139371 - 0.19 11.4 0.1 0.68 9.6 0.0 1.9 2 0 0 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 SIR2 PF02146.17 ORF134615 - 1.9e-27 96.4 0.0 2.4e-27 96.0 0.0 1.1 1 0 0 1 1 1 1 Sir2 family TPP_enzyme_M PF00205.22 ORF134615 - 0.0015 18.3 0.0 0.0022 17.7 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain AF-4 PF05110.13 ORF130965 - 1.6 6.7 4.0 1.9 6.4 4.0 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein Phage_lysozyme PF00959.19 ORF130414 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF130414 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) Rotamase PF00639.21 ORF129632 - 5e-09 37.0 0.0 7.6e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF129632 - 2.1e-06 28.3 0.0 3e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF129632 - 0.00052 20.8 0.0 0.00074 20.4 0.0 1.3 1 0 0 1 1 1 1 PPIC-type PPIASE domain Phage_lysozyme PF00959.19 ORF129427 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF129427 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) TAP42 PF04177.12 ORF129226 - 0.055 12.6 0.0 0.086 12.0 0.0 1.2 1 0 0 1 1 1 0 TAP42-like family CdiA_C_tRNase PF18664.1 ORF129226 - 0.12 12.5 0.1 0.34 11.1 0.0 1.8 2 0 0 2 2 2 0 CdiA C-terminal tRNase domain Phage_lysozyme PF00959.19 ORF128659 - 1.7e-07 31.6 0.4 2.4e-07 31.2 0.4 1.2 1 0 0 1 1 1 1 Phage lysozyme DUF3910 PF13049.6 ORF128659 - 0.11 12.8 0.0 0.19 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) GDPD_2 PF13653.6 ORF126030 - 0.017 15.6 9.5 41 4.8 0.1 5.5 5 0 0 5 5 5 0 Glycerophosphoryl diester phosphodiesterase family Thiamine_BP PF01910.17 ORF126030 - 0.068 13.1 21.3 3.2 7.7 1.3 4.4 1 1 3 4 4 4 0 Thiamine-binding protein EB1_binding PF05937.11 ORF126030 - 0.8 10.3 1.8 26 5.3 0.1 2.4 1 1 1 2 2 2 0 EB-1 Binding Domain DUF4058 PF13267.6 ORF126030 - 5.2 6.4 6.2 3.7 6.9 3.9 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4058) Pombe_5TM PF09437.10 ORF126030 - 6.4 6.3 5.9 4.8 6.8 0.7 2.4 1 1 1 2 2 2 0 Pombe specific 5TM protein Mak_N_cap PF18085.1 ORF126030 - 8.9 7.4 6.7 17 6.6 4.3 2.4 1 1 2 3 3 3 0 Maltokinase N-terminal cap domain Sel1 PF08238.12 ORF124844 - 7.9e-10 39.1 0.2 0.0012 19.4 0.0 2.3 2 0 0 2 2 2 2 Sel1 repeat Ail_Lom PF06316.11 ORF124844 - 0.15 11.8 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Enterobacterial Ail/Lom protein CDC45 PF02724.14 ORF124844 - 1.1 7.4 10.5 1.3 7.2 10.5 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF3612 PF12268.8 ORF121313 - 0.0067 16.6 0.4 0.0095 16.1 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3612) Aft1_OSA PF11785.8 ORF119943 - 0.0035 17.8 1.1 0.0068 16.8 1.1 1.5 1 0 0 1 1 1 1 Aft1 osmotic stress response (OSM) domain Hom_end_hint PF05203.16 ORF119943 - 0.005 16.8 0.4 0.0059 16.6 0.4 1.3 1 0 0 1 1 1 1 Hom_end-associated Hint BCL_N PF04714.13 ORF119943 - 0.012 15.7 0.2 0.022 14.8 0.2 1.5 1 0 0 1 1 1 0 BCL7, N-terminal conserver region zf-PHD-like PF15446.6 ORF119386 - 0.032 13.9 0.9 0.055 13.1 0.9 1.4 1 0 0 1 1 1 0 PHD/FYVE-zinc-finger like domain RRM_1 PF00076.22 ORF119017 - 3.5e-16 58.8 0.8 4.9e-16 58.3 0.1 1.6 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SurE PF01975.17 ORF118083 - 6.4e-37 127.2 0.0 7.8e-37 126.9 0.0 1.1 1 0 0 1 1 1 1 Survival protein SurE ORC6 PF05460.13 ORF114526 - 0.21 10.9 13.1 0.24 10.6 13.1 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Asp-B-Hydro_N PF05279.11 ORF114526 - 0.63 10.1 15.4 0.78 9.8 15.4 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DUF3810 PF12725.7 ORF113702 - 2.4 7.4 11.8 25 4.1 11.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) Roc PF08477.13 ORF113322 - 4.3e-09 36.6 0.0 7.4e-09 35.9 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF113322 - 4.4e-07 29.6 0.0 6.7e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Ras family Arf PF00025.21 ORF113322 - 1.2e-06 28.1 0.0 1.5e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF113322 - 0.00025 20.5 0.0 0.00042 19.8 0.0 1.4 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region PduV-EutP PF10662.9 ORF113322 - 0.075 12.8 0.0 1.3 8.8 0.0 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Peripla_BP_3 PF13377.6 ORF107876 - 6.6e-12 46.1 0.0 7.6e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 ORF107876 - 1.7e-05 24.5 0.0 2.7e-05 23.9 0.0 1.3 1 1 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 ORF107876 - 0.00062 19.3 0.0 0.00075 19.0 0.0 1.2 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family DUF812 PF05667.11 ORF106045 - 0.0059 15.6 18.5 0.0078 15.1 18.5 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF812) Fungal_TACC PF12709.7 ORF106045 - 0.014 15.8 7.4 0.014 15.8 7.4 2.9 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Prefoldin_2 PF01920.20 ORF106045 - 0.073 13.0 17.1 0.1 12.6 3.0 3.2 1 1 2 3 3 3 0 Prefoldin subunit Nup54 PF13874.6 ORF106045 - 0.3 11.2 10.1 1.9 8.6 1.2 3.1 1 1 2 3 3 3 0 Nucleoporin complex subunit 54 Sod_Fe_N PF00081.22 ORF106045 - 0.35 11.4 3.5 0.49 10.9 1.0 2.3 1 1 1 2 2 2 0 Iron/manganese superoxide dismutases, alpha-hairpin domain Bcr-Abl_Oligo PF09036.10 ORF106045 - 0.56 10.3 3.1 2.1 8.4 0.5 2.6 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain DUF1640 PF07798.11 ORF106045 - 0.62 10.1 14.9 5 7.1 4.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) DUF4407 PF14362.6 ORF106045 - 0.81 9.0 7.1 1.1 8.5 7.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF106045 - 0.85 10.3 8.8 6.6 7.4 0.8 3.3 1 1 2 3 3 3 0 SlyX TPR_MLP1_2 PF07926.12 ORF106045 - 0.94 9.5 15.2 0.3 11.1 10.3 2.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Tup_N PF08581.10 ORF106045 - 0.98 9.8 24.6 0.19 12.0 3.0 3.4 1 1 2 3 3 3 0 Tup N-terminal Spc7 PF08317.11 ORF106045 - 1 8.1 21.4 1.2 8.0 2.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Atg14 PF10186.9 ORF106045 - 1.2 8.2 18.0 4.3 6.3 17.9 1.9 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMPIT PF07851.13 ORF106045 - 1.2 8.3 13.3 0.47 9.7 10.7 1.6 1 1 0 1 1 1 0 TMPIT-like protein DUF3450 PF11932.8 ORF106045 - 2.4 7.4 13.7 0.2 10.9 7.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) HIP1_clath_bdg PF16515.5 ORF106045 - 2.4 8.8 12.9 0.44 11.2 6.3 2.4 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF1664 PF07889.12 ORF106045 - 3.2 7.8 13.9 4 7.5 0.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF106045 - 4.6 7.3 22.8 1.7 8.7 12.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus SOGA PF11365.8 ORF106045 - 7.2 7.8 14.3 5.5 8.2 5.1 3.1 2 2 0 2 2 2 0 Protein SOGA DUF4200 PF13863.6 ORF106045 - 7.4 7.0 22.5 3.1 8.2 15.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF4140 PF13600.6 ORF106045 - 8.6 6.9 9.0 4.5 7.8 0.2 2.9 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) Pertus-S5-tox PF09276.10 ORF10576 - 0.093 12.8 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Pertussis toxin S5 subunit Menin PF05053.13 ORF104982 - 0.45 8.8 5.3 0.52 8.6 5.3 1.0 1 0 0 1 1 1 0 Menin Glyco_trans_4_4 PF13579.6 ORF10448 - 0.026 15.0 1.0 0.21 12.0 0.2 2.0 1 1 0 2 2 2 0 Glycosyl transferase 4-like domain MatE PF01554.18 ORF104169 - 1.1e-20 73.9 6.4 1.1e-20 73.9 6.4 1.3 2 0 0 2 2 2 1 MatE UCR_6-4kD PF08997.10 ORF104169 - 0.0072 16.2 0.3 0.66 10.0 0.1 2.4 2 0 0 2 2 2 1 Ubiquinol-cytochrome C reductase complex, 6.4kD protein SecY PF00344.20 ORF104169 - 0.021 14.1 3.4 0.023 14.0 3.4 1.2 1 1 0 1 1 1 0 SecY translocase FtsX PF02687.21 ORF104169 - 4.1 7.9 12.1 11 6.6 1.1 2.7 2 1 0 2 2 2 0 FtsX-like permease family TetR_C_6 PF13977.6 ORF102679 - 0.35 11.1 0.8 0.8 9.9 0.2 1.8 1 1 1 2 2 2 0 BetI-type transcriptional repressor, C-terminal Phtf-FEM1B_bdg PF12129.8 NODE_37815_length_562_cov_1.656546_g30536_i0forward_frame_1 - 0.0066 16.3 0.9 0.0066 16.3 0.9 1.7 2 0 0 2 2 2 1 Male germ-cell putative homeodomain transcription factor NADH-G_4Fe-4S_3 PF10588.9 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_1 - 6.7e-16 57.6 0.2 1.4e-15 56.5 0.2 1.6 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer2_4 PF13510.6 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_1 - 6.2e-13 48.6 0.1 1.5e-12 47.4 0.0 1.7 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2 PF00111.27 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_1 - 9.9e-11 41.4 1.4 4.5e-10 39.3 0.2 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Opy2 PF09463.10 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_1 - 7.7 6.9 9.8 0.25 11.7 0.7 2.6 3 0 0 3 3 3 0 Opy2 protein Sacchrp_dh_NADP PF03435.18 NODE_37800_length_562_cov_77.459203_g30521_i0reverse_frame_1 - 0.015 15.5 0.0 0.019 15.2 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Dynamin_M PF01031.20 NODE_37793_length_562_cov_94.802657_g30514_i0reverse_frame_1 - 4.9e-39 134.3 0.3 6.6e-39 133.8 0.3 1.2 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 NODE_37793_length_562_cov_94.802657_g30514_i0reverse_frame_1 - 9.8e-14 51.8 0.1 2.5e-13 50.4 0.0 1.6 2 0 0 2 2 2 1 Dynamin family PH_RBD PF12068.8 NODE_37793_length_562_cov_94.802657_g30514_i0reverse_frame_1 - 0.018 14.5 0.0 0.025 14.1 0.0 1.2 1 0 0 1 1 1 0 Rab-binding domain (RBD) Baculo_p74 PF04583.12 NODE_37793_length_562_cov_94.802657_g30514_i0reverse_frame_1 - 0.094 12.2 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae p74 conserved region NHR2 PF08788.11 NODE_37782_length_562_cov_155.798861_g30503_i0forward_frame_1 - 0.092 12.5 4.4 0.15 11.8 0.9 2.3 2 0 0 2 2 2 0 NHR2 domain like NHase_alpha PF02979.16 NODE_37775_length_562_cov_274.698292_g30496_i0forward_frame_1 - 6.4 6.0 8.2 7.6 5.8 0.7 2.3 2 0 0 2 2 2 0 Nitrile hydratase, alpha chain Fz PF01392.22 NODE_37774_length_562_cov_351.265655_g30495_i0reverse_frame_1 - 4.9e-05 23.9 4.5 7e-05 23.4 4.5 1.3 1 0 0 1 1 1 1 Fz domain RNase_J_C PF17770.1 NODE_37766_length_562_cov_11221.518027_g30488_i0forward_frame_1 - 0.32 12.1 4.1 0.36 11.9 1.2 2.2 2 0 0 2 2 2 0 Ribonuclease J C-terminal domain Ion_trans_2 PF07885.16 NODE_37763_length_563_cov_2.469697_g30486_i0reverse_frame_1 - 8.4e-13 48.1 6.7 8.4e-13 48.1 6.7 1.7 2 0 0 2 2 2 1 Ion channel Ion_trans PF00520.31 NODE_37763_length_563_cov_2.469697_g30486_i0reverse_frame_1 - 3.3e-10 39.6 8.2 5e-10 39.0 8.2 1.3 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 NODE_37763_length_563_cov_2.469697_g30486_i0reverse_frame_1 - 0.14 12.0 0.8 0.22 11.3 0.7 1.6 1 1 0 1 1 1 0 Ligand-gated ion channel GATase PF00117.28 NODE_37757_length_563_cov_3.556818_g30480_i0forward_frame_1 - 6.2e-33 114.2 0.0 8.1e-33 113.8 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CTP_synth_N PF06418.14 NODE_37757_length_563_cov_3.556818_g30480_i0forward_frame_1 - 4.1e-08 32.9 0.0 6.6e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 CTP synthase N-terminus Peptidase_C26 PF07722.13 NODE_37757_length_563_cov_3.556818_g30480_i0forward_frame_1 - 0.045 13.5 0.0 0.24 11.1 0.0 1.9 2 0 0 2 2 2 0 Peptidase C26 zf-rbx1 PF12678.7 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 7.7e-07 29.3 1.9 7.7e-07 29.3 1.9 3.0 3 0 0 3 3 3 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 1.5e-06 28.4 1.5 1.5e-06 28.4 1.5 3.1 3 0 0 3 3 3 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 3.1e-05 23.7 9.0 3.3e-05 23.6 1.9 3.3 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.0001 22.1 1.0 0.0001 22.1 1.0 2.7 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.002 18.0 0.8 0.002 18.0 0.8 3.1 4 0 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.008 16.1 3.1 0.008 16.1 3.1 2.9 3 0 0 3 3 3 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.056 13.3 11.8 0.91 9.4 11.8 2.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.067 12.8 7.6 0.18 11.5 0.6 2.5 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type HypA PF01155.19 NODE_37755_length_563_cov_53.888258_g30478_i0reverse_frame_1 - 0.33 11.0 3.7 7 6.7 4.7 2.0 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Podoplanin PF05808.11 NODE_37717_length_563_cov_4650.662879_g30442_i0forward_frame_1 - 0.057 13.5 0.1 0.081 13.0 0.1 1.3 1 0 0 1 1 1 0 Podoplanin YjbE PF11106.8 NODE_37717_length_563_cov_4650.662879_g30442_i0forward_frame_1 - 0.77 10.0 7.5 0.29 11.4 4.5 1.8 1 1 1 2 2 2 0 Exopolysaccharide production protein YjbE Jnk-SapK_ap_N PF09744.9 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.015 15.5 15.0 0.015 15.5 15.0 3.1 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 TMF_DNA_bd PF12329.8 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.017 15.1 46.9 0.15 12.1 7.0 4.2 2 1 1 4 4 4 0 TATA element modulatory factor 1 DNA binding KLRAQ PF10205.9 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.064 13.5 2.3 0.064 13.5 2.3 3.8 3 1 0 3 3 3 0 Predicted coiled-coil domain-containing protein Lebercilin PF15619.6 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.07 12.8 38.0 0.17 11.6 25.4 2.2 1 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease PhoU PF01895.19 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.12 12.8 0.8 0.12 12.8 0.8 3.7 2 2 1 4 4 4 0 PhoU domain SOGA PF11365.8 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.24 12.6 24.7 1.7 9.8 8.7 3.0 2 1 1 3 3 3 0 Protein SOGA AAA_13 PF13166.6 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.63 8.6 29.4 0.0072 15.0 21.0 1.7 2 0 0 2 2 2 0 AAA domain FlxA PF14282.6 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 0.84 9.7 26.2 0.7 9.9 8.7 4.0 1 1 1 3 3 3 0 FlxA-like protein TPR_MLP1_2 PF07926.12 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 1.1 9.3 30.6 0.25 11.4 12.2 3.1 3 0 0 3 3 3 0 TPR/MLP1/MLP2-like protein MACPF PF01823.19 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 1.5 8.9 7.8 4.1 7.4 7.8 1.9 1 1 0 1 1 1 0 MAC/Perforin domain Bacillus_HBL PF05791.11 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 2.3 8.0 20.1 2.6 7.9 2.0 3.7 1 1 2 3 3 3 0 Bacillus haemolytic enterotoxin (HBL) ADIP PF11559.8 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 2.5 8.2 36.3 1.8 8.6 13.4 3.5 1 1 1 3 3 3 0 Afadin- and alpha -actinin-Binding DUF4407 PF14362.6 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 2.9 7.2 18.3 4 6.7 9.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) NRBF2 PF08961.10 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 3.3 7.3 20.8 0.12 12.0 7.3 2.8 1 1 2 3 3 3 0 Nuclear receptor-binding factor 2, autophagy regulator UPF0242 PF06785.11 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 3.3 7.8 39.9 0.078 13.1 16.4 3.0 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus Prefoldin_2 PF01920.20 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 3.7 7.6 35.2 1 9.3 14.0 3.9 2 1 1 3 3 3 0 Prefoldin subunit Halogen_Hydrol PF10112.9 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 3.8 7.5 21.8 0.61 10.1 13.9 2.8 1 1 1 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DASH_Hsk3 PF08227.11 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 5.5 7.4 7.2 43 4.6 0.2 3.6 3 0 0 3 3 3 0 DASH complex subunit Hsk3 like Tropomyosin_1 PF12718.7 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 6.3 7.0 38.6 3 8.0 11.7 3.5 1 1 2 3 3 3 0 Tropomyosin like ZapB PF06005.12 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 6.3 7.3 39.2 3.6 8.1 3.8 4.2 3 1 1 4 4 4 0 Cell division protein ZapB ERM PF00769.19 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 8.4 6.1 34.6 42 3.8 34.6 2.7 1 1 0 1 1 1 0 Ezrin/radixin/moesin family DivIC PF04977.15 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 8.6 6.2 33.5 0.5 10.2 2.6 4.4 2 1 2 4 4 4 0 Septum formation initiator DUF1943 PF09172.11 NODE_37716_length_564_cov_1.570888_g30441_i0forward_frame_1 - 9.2 5.4 11.3 1.2 8.3 6.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF1943) MNE1 PF13762.6 NODE_37711_length_564_cov_2.943289_g30436_i0reverse_frame_1 - 0.099 12.6 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component zf-RING_5 PF14634.6 NODE_37705_length_564_cov_4.319471_g30430_i0reverse_frame_1 - 0.026 14.5 0.1 0.046 13.7 0.1 1.3 1 0 0 1 1 1 0 zinc-RING finger domain Fer4_7 PF12838.7 NODE_37705_length_564_cov_4.319471_g30430_i0reverse_frame_1 - 0.036 14.6 0.6 0.071 13.7 0.6 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain RRF_GI PF12614.8 NODE_37681_length_564_cov_120.901701_g30408_i0forward_frame_1 - 0.16 12.1 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 Ribosome recycling factor RCC1 PF00415.18 NODE_37673_length_564_cov_245.638941_g30400_i0forward_frame_1 - 3.7e-29 101.1 0.0 6.2e-13 49.2 0.0 3.1 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_37673_length_564_cov_245.638941_g30400_i0forward_frame_1 - 1.3e-19 69.4 0.8 8e-07 28.7 0.0 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Sel1 PF08238.12 NODE_37667_length_564_cov_340.495274_g30395_i0forward_frame_1 - 1.2e-31 108.4 27.0 6e-09 36.3 0.5 5.1 5 0 0 5 5 5 5 Sel1 repeat Flu_M1_C PF08289.11 NODE_37667_length_564_cov_340.495274_g30395_i0forward_frame_1 - 0.048 13.9 2.3 0.41 10.9 0.6 2.2 1 1 0 2 2 2 0 Influenza Matrix protein (M1) C-terminal domain Gsf2 PF11055.8 NODE_37667_length_564_cov_340.495274_g30395_i0forward_frame_1 - 0.1 11.3 0.9 0.69 8.6 0.2 2.2 1 1 0 2 2 2 0 Glucose signalling factor 2 ER PF01133.17 NODE_37662_length_564_cov_943.587902_g30390_i0reverse_frame_1 - 2.4e-31 107.6 0.0 3.2e-31 107.2 0.0 1.2 1 0 0 1 1 1 1 Enhancer of rudimentary PP_kinase_C_1 PF17941.1 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 1.5e-45 154.7 0.1 2.2e-45 154.2 0.1 1.2 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain 1 PP_kinase PF02503.17 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 9e-13 48.3 0.0 1.4e-12 47.7 0.0 1.3 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PLDc_2 PF13091.6 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 0.00094 19.1 0.0 0.0015 18.4 0.0 1.4 1 0 0 1 1 1 1 PLD-like domain MR_MLE_C PF13378.6 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 0.005 16.4 0.1 0.007 15.9 0.1 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like Pyr_redox PF00070.27 NODE_37650_length_565_cov_2.692453_g30383_i0reverse_frame_2 - 0.13 12.8 0.0 0.26 11.9 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Polyoma_agno PF01736.16 NODE_37648_length_565_cov_3.113208_g30382_i0reverse_frame_3 - 0.01 15.5 0.0 0.024 14.4 0.0 1.7 1 1 0 1 1 1 0 Polyomavirus agnoprotein MAD PF05557.13 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.0034 15.8 21.0 0.0039 15.6 21.0 1.0 1 0 0 1 1 1 1 Mitotic checkpoint protein MscS_porin PF12795.7 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.01 15.4 22.4 0.01 15.4 22.4 1.9 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain MRP-S27 PF10037.9 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.056 12.3 9.9 0.064 12.1 9.9 1.1 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 DAP_B PF07930.12 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.18 11.8 3.4 0.26 11.2 3.4 1.3 1 0 0 1 1 1 0 D-aminopeptidase, domain B TPR_1 PF00515.28 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.2 11.5 2.3 13 5.8 0.4 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat Rx_N PF18052.1 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 0.39 11.0 12.4 0.43 10.9 10.7 2.1 1 1 1 2 2 2 0 Rx N-terminal domain Atg14 PF10186.9 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 2.9 6.9 11.5 1.2 8.2 9.4 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 XhlA PF10779.9 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 3 8.1 8.3 23 5.3 6.6 2.4 1 1 1 2 2 2 0 Haemolysin XhlA PKcGMP_CC PF16808.5 NODE_37647_length_565_cov_3.192453_g30381_i0reverse_frame_2 - 4.1 7.4 11.5 2.8 7.9 1.0 3.3 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF3701 PF12482.8 NODE_37647_length_565_cov_3.192453_g30381_i0forward_frame_2 - 0.037 14.1 0.2 0.066 13.3 0.2 1.4 1 0 0 1 1 1 0 Phage integrase protein DUF2353 PF09789.9 NODE_37646_length_565_cov_3.398113_g30380_i1forward_frame_3 - 0.013 14.9 0.1 0.015 14.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) LcrG PF07216.12 NODE_37646_length_565_cov_3.398113_g30380_i1forward_frame_3 - 0.11 12.4 0.9 0.18 11.7 0.9 1.3 1 0 0 1 1 1 0 LcrG protein DUF3138 PF11336.8 NODE_37646_length_565_cov_3.398113_g30380_i1forward_frame_3 - 0.14 10.8 0.2 0.19 10.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) DUF2353 PF09789.9 NODE_37645_length_565_cov_3.473585_g30380_i0reverse_frame_3 - 0.0081 15.6 0.1 0.0098 15.3 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized coiled-coil protein (DUF2353) LcrG PF07216.12 NODE_37645_length_565_cov_3.473585_g30380_i0reverse_frame_3 - 0.1 12.5 1.5 0.17 11.8 1.5 1.3 1 0 0 1 1 1 0 LcrG protein Ank_2 PF12796.7 NODE_37632_length_565_cov_95.596226_g30367_i0forward_frame_2 - 1.3e-37 128.2 0.5 3.4e-13 50.0 0.1 2.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_37632_length_565_cov_95.596226_g30367_i0forward_frame_2 - 3.7e-23 79.1 0.0 8.4e-06 25.8 0.0 4.9 5 0 0 5 5 5 4 Ankyrin repeat Ank_4 PF13637.6 NODE_37632_length_565_cov_95.596226_g30367_i0forward_frame_2 - 1.2e-22 79.9 0.1 4.8e-10 39.8 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_37632_length_565_cov_95.596226_g30367_i0forward_frame_2 - 1.7e-22 78.8 0.2 6e-06 26.5 0.0 4.6 4 0 0 4 4 4 4 Ankyrin repeat Ank_5 PF13857.6 NODE_37632_length_565_cov_95.596226_g30367_i0forward_frame_2 - 3.9e-22 78.0 2.6 8.2e-07 29.2 0.1 4.4 2 1 3 5 5 5 4 Ankyrin repeats (many copies) DUF892 PF05974.12 NODE_37632_length_565_cov_95.596226_g30367_i0forward_frame_2 - 1.5 8.8 5.4 1 9.4 0.7 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF892) Nuc_sug_transp PF04142.15 NODE_37629_length_565_cov_121.196226_g30364_i0reverse_frame_3 - 1.2e-41 143.0 8.4 1.5e-41 142.6 8.4 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter DUF3197 PF11432.8 NODE_37629_length_565_cov_121.196226_g30364_i0forward_frame_3 - 0.079 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3197) SAM_1 PF00536.30 NODE_37621_length_565_cov_158.145283_g14262_i1forward_frame_3 - 0.047 14.1 0.0 0.08 13.4 0.0 1.4 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) ASC PF00858.24 NODE_37610_length_565_cov_422.513208_g30347_i0forward_frame_2 - 0.38 9.6 10.0 0.44 9.5 10.0 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel Cnd1_N PF12922.7 NODE_37610_length_565_cov_422.513208_g30347_i0forward_frame_2 - 0.87 9.4 8.1 1.7 8.4 8.1 1.5 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term Zip PF02535.22 NODE_37610_length_565_cov_422.513208_g30347_i0forward_frame_2 - 1.8 7.7 6.1 1.8 7.7 6.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter OATP PF03137.20 NODE_37610_length_565_cov_422.513208_g30347_i0forward_frame_2 - 3.3 5.9 5.4 4.7 5.4 5.4 1.2 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Paramyxo_ncap PF00973.19 NODE_37610_length_565_cov_422.513208_g30347_i0forward_frame_2 - 4.7 6.0 12.6 6.5 5.5 12.6 1.2 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein DUF4407 PF14362.6 NODE_37610_length_565_cov_422.513208_g30347_i0forward_frame_2 - 7.1 5.9 9.0 9.9 5.4 9.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ABC_tran PF00005.27 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 1.1e-29 103.7 0.0 1.3e-29 103.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 6e-05 23.3 0.0 0.00017 21.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_21 PF13304.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.00053 19.9 0.1 0.047 13.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.0024 17.8 0.2 0.0051 16.7 0.2 1.4 1 1 1 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.0029 17.7 0.0 0.0038 17.3 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_16 PF13191.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.0034 17.8 0.1 0.0045 17.4 0.1 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.005 17.1 0.0 0.078 13.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.006 16.2 0.4 0.022 14.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.012 15.3 0.0 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.016 14.7 0.0 3.7 6.9 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_33 PF13671.6 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.09 12.9 0.0 0.16 12.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain DLIC PF05783.11 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.11 11.4 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) NB-ARC PF00931.22 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.18 10.9 0.0 0.41 9.8 0.0 1.6 2 0 0 2 2 2 0 NB-ARC domain ABC_ATPase PF09818.9 NODE_37599_length_566_cov_2.540490_g30336_i0reverse_frame_2 - 0.25 10.1 0.0 4.1 6.1 0.1 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class DUF4269 PF14091.6 NODE_37597_length_566_cov_2.937853_g30334_i0reverse_frame_2 - 0.13 12.5 1.6 0.53 10.5 0.2 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4269) NAD_binding_2 PF03446.15 NODE_37597_length_566_cov_2.937853_g30334_i0forward_frame_2 - 1.2e-28 100.2 0.0 3.4e-28 98.8 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 NODE_37597_length_566_cov_2.937853_g30334_i0forward_frame_2 - 1.7e-27 96.1 0.3 2.2e-27 95.7 0.3 1.2 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DUF2185 PF09951.9 NODE_37594_length_566_cov_3.472693_g30331_i0forward_frame_3 - 0.002 17.9 0.0 0.0043 16.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2185) NapB PF03892.14 NODE_37594_length_566_cov_3.472693_g30331_i0forward_frame_3 - 0.045 13.8 0.0 0.069 13.2 0.0 1.2 1 0 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) DUF5073 PF16817.5 NODE_37594_length_566_cov_3.472693_g30331_i0forward_frame_3 - 0.11 12.5 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5073) TOM20_plant PF06552.12 NODE_37588_length_566_cov_77.248588_g9762_i2reverse_frame_3 - 0.056 13.2 0.1 0.078 12.7 0.1 1.2 1 0 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 DUF4094 PF13334.6 NODE_37588_length_566_cov_77.248588_g9762_i2reverse_frame_3 - 0.18 12.2 3.7 0.34 11.3 2.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) Cadherin_C_2 PF16492.5 NODE_37586_length_566_cov_78.305085_g30244_i1reverse_frame_2 - 0.1 13.4 0.7 0.1 13.4 0.7 2.5 2 1 0 2 2 2 0 Cadherin cytoplasmic C-terminal CPSase_L_D3 PF02787.19 NODE_37586_length_566_cov_78.305085_g30244_i1forward_frame_3 - 0.01 16.2 0.2 0.024 15.0 0.2 1.7 1 1 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain V_ATPase_I PF01496.19 NODE_37585_length_566_cov_79.969868_g30324_i0forward_frame_3 - 0.04 11.9 0.4 0.046 11.7 0.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NtCtMGAM_N PF16863.5 NODE_37583_length_566_cov_86.629002_g30322_i0forward_frame_3 - 1.4e-05 25.2 0.0 2.2e-05 24.6 0.0 1.4 1 1 0 1 1 1 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase DUF4200 PF13863.6 NODE_37582_length_566_cov_88.555556_g17503_i1reverse_frame_2 - 0.015 15.7 8.5 0.015 15.7 8.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) V_ATPase_I PF01496.19 NODE_37582_length_566_cov_88.555556_g17503_i1reverse_frame_2 - 3.2 5.6 4.8 4.3 5.1 4.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Lyase_N PF09092.11 NODE_37567_length_566_cov_242.150659_g30307_i0forward_frame_3 - 0.15 11.9 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Lyase, N terminal zf-DNA_Pol PF08996.10 NODE_37557_length_566_cov_1922.431262_g30301_i0forward_frame_2 - 0.61 9.8 4.5 0.088 12.5 1.0 1.5 2 0 0 2 2 2 0 DNA Polymerase alpha zinc finger MFS_1 PF07690.16 NODE_37553_length_567_cov_2.605263_g30297_i0forward_frame_2 - 2.3e-18 66.3 4.9 2.6e-18 66.1 4.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 NODE_37553_length_567_cov_2.605263_g30297_i0forward_frame_2 - 0.013 14.1 14.9 0.0075 14.9 11.0 1.9 1 1 1 2 2 2 0 MFS/sugar transport protein AKAP28 PF14469.6 NODE_37552_length_567_cov_2.667293_g30296_i0reverse_frame_3 - 0.092 12.5 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 28 kDa A-kinase anchor FAD_binding_4 PF01565.23 NODE_37550_length_567_cov_3.186090_g30294_i0reverse_frame_2 - 5e-09 36.0 0.1 6.7e-09 35.6 0.1 1.1 1 0 0 1 1 1 1 FAD binding domain zf-B_box PF00643.24 NODE_37548_length_567_cov_3.618421_g30292_i0reverse_frame_2 - 0.0046 17.1 7.3 0.017 15.3 7.3 1.9 1 0 0 1 1 1 1 B-box zinc finger zf-HIT PF04438.16 NODE_37548_length_567_cov_3.618421_g30292_i0reverse_frame_2 - 0.028 14.3 12.8 0.13 12.2 1.7 2.7 1 1 1 2 2 2 0 HIT zinc finger IBR PF01485.21 NODE_37548_length_567_cov_3.618421_g30292_i0reverse_frame_2 - 0.99 9.7 10.6 2.4 8.5 10.6 1.6 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Mitofilin PF09731.9 NODE_37536_length_567_cov_77.451128_g30280_i0reverse_frame_2 - 4.3 6.0 7.0 5.1 5.8 7.0 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein YscK PF06578.12 NODE_37536_length_567_cov_77.451128_g30280_i0forward_frame_2 - 0.41 10.1 2.2 0.28 10.6 0.8 1.4 2 0 0 2 2 2 0 YOP proteins translocation protein K (YscK) Methyltransf_23 PF13489.6 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 2.2e-11 43.9 0.0 2.8e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 1e-10 42.1 0.0 1.8e-10 41.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 4.1e-10 39.7 0.0 4.5e-09 36.3 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 4.6e-09 36.9 0.0 1.4e-08 35.4 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 1.2e-07 32.3 0.0 2.2e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 0.0056 16.1 0.0 0.027 13.9 0.0 1.8 1 1 1 2 2 2 1 Tellurite resistance protein TehB MTS PF05175.14 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 0.019 14.5 0.0 0.028 14.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_32 PF13679.6 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 0.021 14.8 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 NODE_37508_length_567_cov_576.447368_g30257_i0reverse_frame_2 - 0.17 11.2 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase CDC73_C PF05179.14 ORF99340 - 1.2e-30 106.3 1.6 1.5e-30 106.0 1.6 1.1 1 0 0 1 1 1 1 RNA pol II accessory factor, Cdc73 family, C-terminal RGM_C PF06534.13 ORF9906 - 0.0012 18.3 1.2 0.002 17.7 1.2 1.4 1 1 0 1 1 1 1 Repulsive guidance molecule (RGM) C-terminus Hamartin PF04388.12 ORF98827 - 3.6 6.2 4.9 3.9 6.0 4.9 1.1 1 0 0 1 1 1 0 Hamartin protein DUF4813 PF16072.5 ORF977 - 2 8.0 10.1 16 5.0 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4813) AveC_like PF17198.4 ORF93726 - 0.064 12.7 1.1 0.11 11.9 1.1 1.4 1 1 0 1 1 1 0 Spirocyclase AveC-like Sfi1 PF08457.10 ORF9206 - 0.0023 16.5 4.9 0.0024 16.5 4.9 1.2 1 0 0 1 1 1 1 Sfi1 spindle body protein HTH_WhiA PF02650.14 ORF9206 - 0.12 12.8 5.8 0.2 12.0 1.0 3.2 1 1 0 2 2 2 0 WhiA C-terminal HTH domain Calici_MSP PF05752.11 ORF9206 - 0.33 10.8 5.4 0.16 11.8 0.4 2.3 1 1 1 2 2 2 0 Calicivirus minor structural protein FHIPEP PF00771.20 ORF9206 - 0.51 8.7 9.5 0.59 8.5 9.5 1.0 1 0 0 1 1 1 0 FHIPEP family Syntaxin_2 PF14523.6 ORF9206 - 0.69 10.3 11.3 0.18 12.2 4.7 2.6 1 1 2 3 3 3 0 Syntaxin-like protein Mst1_SARAH PF11629.8 ORF9206 - 3.5 7.8 6.4 1.5 8.9 0.2 3.2 2 1 2 4 4 4 0 C terminal SARAH domain of Mst1 Pkinase PF00069.25 ORF91536 - 2.1e-10 40.4 0.0 2.2e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF91536 - 0.00047 19.5 0.0 0.00064 19.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF91536 - 0.016 14.5 0.3 0.029 13.7 0.3 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family CENP-B_dimeris PF09026.10 ORF91476 - 0.015 15.7 0.0 0.024 15.0 0.0 1.3 1 0 0 1 1 1 0 Centromere protein B dimerisation domain p25-alpha PF05517.12 ORF91476 - 0.018 15.2 0.2 0.039 14.1 0.2 1.6 1 0 0 1 1 1 0 p25-alpha Glyco_transf_15 PF01793.16 ORF88041 - 4.5e-20 72.1 1.5 5.2e-20 71.9 1.5 1.0 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase EF-hand_6 PF13405.6 ORF87441 - 0.016 15.1 0.1 0.43 10.6 0.6 2.6 2 0 0 2 2 2 0 EF-hand domain Methyltransf_29 PF03141.16 ORF8468 - 0.082 11.4 0.0 0.11 11.0 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Ribosomal_L6 PF00347.23 ORF83875 - 2.8e-28 98.4 4.7 1.9e-16 60.5 0.2 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 DUF1493 PF07377.12 ORF83875 - 0.12 12.8 0.1 0.28 11.7 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) Ank_5 PF13857.6 ORF83385 - 3.2e-06 27.3 0.0 7.2e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF83385 - 0.00042 20.8 0.0 0.00085 19.8 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF83385 - 0.00045 20.7 0.0 0.00069 20.2 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF83385 - 0.0011 19.4 0.0 0.003 17.9 0.0 1.8 1 0 0 1 1 1 1 Ankyrin repeat Ank_3 PF13606.6 ORF83385 - 0.066 13.8 0.0 0.27 11.9 0.0 2.0 1 0 0 1 1 1 0 Ankyrin repeat Ndc80_HEC PF03801.13 ORF83385 - 0.075 12.7 0.3 0.13 11.9 0.3 1.3 1 0 0 1 1 1 0 HEC/Ndc80p family WW PF00397.26 ORF82038 - 0.00071 19.6 0.0 0.0023 18.0 0.0 1.9 2 0 0 2 2 2 1 WW domain UvrB PF12344.8 ORF81093 - 9.9e-23 79.7 0.1 2.1e-22 78.7 0.1 1.6 1 0 0 1 1 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 ORF81093 - 3.4e-10 40.3 0.0 7.5e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UVR PF02151.19 ORF81093 - 1.7e-07 30.8 1.2 3.3e-07 29.8 1.2 1.5 1 0 0 1 1 1 1 UvrB/uvrC motif IF2_N PF04760.15 ORF81093 - 0.0078 16.0 0.9 0.022 14.6 0.1 2.1 2 0 0 2 2 2 1 Translation initiation factor IF-2, N-terminal region C1_2 PF03107.16 ORF80543 - 0.056 13.8 5.8 0.056 13.8 5.8 4.3 2 2 1 3 3 3 0 C1 domain Ric8 PF10165.9 ORF80543 - 0.099 11.7 0.0 0.099 11.7 0.0 1.1 1 0 0 1 1 1 0 Guanine nucleotide exchange factor synembryn zinc-ribbons_6 PF07191.12 ORF80543 - 0.65 10.0 27.6 1.1 9.2 2.8 3.5 2 2 1 3 3 3 0 zinc-ribbons DZR PF12773.7 ORF80543 - 0.67 10.0 26.3 2.3 8.3 2.2 3.5 2 2 0 3 3 3 0 Double zinc ribbon zf-RVT PF13966.6 ORF80543 - 2.6 8.8 13.4 8.4 7.2 0.3 3.5 2 1 1 3 3 3 0 zinc-binding in reverse transcriptase zf-C3HC4_3 PF13920.6 ORF80543 - 7.5 6.5 24.3 1.7 8.6 1.8 4.0 2 1 2 4 4 4 0 Zinc finger, C3HC4 type (RING finger) CLAMP PF14769.6 ORF79445 - 8.9e-11 42.1 0.9 1.4e-10 41.5 0.9 1.3 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 Homeodomain PF00046.29 ORF7922 - 0.0027 17.5 0.1 0.006 16.4 0.1 1.6 1 0 0 1 1 1 1 Homeodomain RCC1 PF00415.18 ORF77664 - 0.039 14.6 0.0 0.1 13.2 0.0 1.6 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Ank_2 PF12796.7 ORF73377 - 3e-17 63.0 0.1 3.6e-09 37.1 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF73377 - 1.5e-12 47.4 0.0 1.1e-06 28.8 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF73377 - 1.6e-10 41.3 0.0 0.00025 21.5 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF73377 - 4.2e-09 35.9 0.0 0.0033 17.8 0.0 3.9 4 0 0 4 4 4 2 Ankyrin repeat Ank PF00023.30 ORF73377 - 7.9e-05 22.9 0.0 1.1 9.9 0.0 3.8 4 0 0 4 4 4 2 Ankyrin repeat PBP_GOBP PF01395.22 ORF73377 - 0.015 15.5 3.5 0.016 15.3 0.5 2.2 2 1 0 2 2 2 0 PBP/GOBP family Salp15 PF12115.8 ORF73377 - 0.12 12.8 2.4 0.9 10.0 0.1 2.5 1 1 2 3 3 3 0 Salivary protein of 15kDa inhibits CD4+ T cell activation Laminin_N PF00055.17 ORF72729 - 0.17 11.5 0.1 0.25 10.9 0.1 1.1 1 0 0 1 1 1 0 Laminin N-terminal (Domain VI) Vac14_Fig4_bd PF11916.8 ORF72729 - 0.24 11.1 5.5 0.28 10.8 5.5 1.1 1 0 0 1 1 1 0 Vacuolar protein 14 C-terminal Fig4p binding Ank_2 PF12796.7 ORF72500 - 1.4e-21 76.8 0.1 3.3e-14 53.2 0.1 2.8 1 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF72500 - 5.9e-20 70.8 6.7 1.6e-05 25.1 0.2 4.5 5 1 0 5 5 5 3 Ankyrin repeat Ank_4 PF13637.6 ORF72500 - 8.9e-19 67.6 1.6 1.4e-11 44.6 0.2 4.4 3 2 2 5 5 5 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF72500 - 3.9e-17 62.1 2.9 5e-07 29.9 0.2 4.3 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF72500 - 4.9e-17 60.3 1.7 8.1e-05 22.7 0.1 4.2 5 0 0 5 5 5 3 Ankyrin repeat DUF2027 PF09640.10 ORF69609 - 0.088 12.4 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2027) IGFBP PF00219.18 ORF65561 - 7 7.4 8.4 12 6.7 4.0 2.3 2 0 0 2 2 2 0 Insulin-like growth factor binding protein CRC_subunit PF08624.10 ORF59315 - 1.1 9.7 7.0 3 8.3 0.2 2.8 1 1 2 3 3 3 0 Chromatin remodelling complex Rsc7/Swp82 subunit DUF2207 PF09972.9 ORF59315 - 2.6 6.7 6.1 3.2 6.4 6.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Lipase_GDSL_2 PF13472.6 ORF58972 - 0.00078 19.9 0.0 0.001 19.5 0.0 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Plasmodium_Vir PF05795.11 ORF57931 - 0.0008 18.9 2.1 0.001 18.6 2.1 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF57931 - 0.0013 17.7 4.7 0.0013 17.7 4.7 2.1 2 1 1 3 3 2 1 Mechanosensitive ion channel inner membrane domain 1 DUF4064 PF13273.6 ORF57931 - 0.0085 16.3 0.0 0.23 11.8 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) DUF2208 PF09973.9 ORF57931 - 0.023 14.3 1.6 2.4 7.7 0.1 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2208) Spore_coat_CotO PF14153.6 ORF57931 - 0.031 14.2 17.2 0.044 13.7 17.2 1.2 1 0 0 1 1 1 0 Spore coat protein CotO SLC12 PF03522.15 ORF57931 - 0.031 13.3 5.5 0.033 13.2 5.5 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Hid1 PF12722.7 ORF57931 - 0.042 12.0 6.6 0.048 11.8 6.6 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein BSMAP PF12280.8 ORF57931 - 0.052 13.8 6.5 0.19 11.9 6.5 1.8 1 1 0 1 1 1 0 Brain specific membrane anchored protein Serinc PF03348.15 ORF57931 - 0.055 12.4 6.3 0.66 8.8 6.3 2.0 1 1 0 1 1 1 0 Serine incorporator (Serinc) CDC45 PF02724.14 ORF57931 - 0.056 11.7 15.7 0.06 11.6 15.7 1.1 1 0 0 1 1 1 0 CDC45-like protein CSG2 PF16965.5 ORF57931 - 0.06 12.3 3.6 0.15 11.0 3.6 1.7 1 1 0 1 1 1 0 Ceramide synthase regulator TRP PF06011.12 ORF57931 - 0.068 11.9 0.0 0.1 11.3 0.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel Tho2 PF11262.8 ORF57931 - 0.078 12.2 5.3 0.1 11.8 5.3 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 LAP1C PF05609.12 ORF57931 - 0.084 11.9 9.4 0.099 11.7 9.4 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) GWT1 PF06423.12 ORF57931 - 0.1 12.7 2.8 0.63 10.2 2.8 2.0 1 1 0 1 1 1 0 GWT1 Connexin PF00029.19 ORF57931 - 0.11 12.3 10.8 1.9 8.2 10.8 2.0 1 1 0 1 1 1 0 Connexin RR_TM4-6 PF06459.12 ORF57931 - 0.11 12.3 18.0 0.15 11.9 18.0 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 OppC_N PF12911.7 ORF57931 - 0.12 12.4 4.1 1.9 8.5 2.2 2.1 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C MFS_1_like PF12832.7 ORF57931 - 0.13 11.1 0.0 0.19 10.6 0.0 1.4 1 1 0 1 1 1 0 MFS_1 like family SARAF PF06682.12 ORF57931 - 0.18 11.4 1.1 3.6 7.1 0.3 2.0 1 1 1 2 2 2 0 SOCE-associated regulatory factor of calcium homoeostasis FAM60A PF15396.6 ORF57931 - 0.33 10.9 4.9 0.38 10.7 4.9 1.2 1 0 0 1 1 1 0 Protein Family FAM60A DUF2828 PF11443.8 ORF57931 - 0.43 8.6 7.6 0.56 8.2 7.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) PA26 PF04636.13 ORF57931 - 0.56 9.1 7.0 0.65 8.9 7.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) V_ATPase_I PF01496.19 ORF57931 - 0.6 8.0 10.3 0.76 7.6 10.3 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2207 PF09972.9 ORF57931 - 0.72 8.5 7.5 0.048 12.4 1.5 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) CENP-N PF05238.13 ORF57931 - 0.8 8.9 8.1 0.89 8.8 8.1 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like ALMT PF11744.8 ORF57931 - 0.8 8.5 6.7 1.2 7.9 6.7 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Borrelia_P83 PF05262.11 ORF57931 - 0.92 7.9 14.8 0.94 7.9 14.8 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein SID-1_RNA_chan PF13965.6 ORF57931 - 0.95 7.8 8.0 1.6 7.0 8.0 1.3 1 1 0 1 1 1 0 dsRNA-gated channel SID-1 CLN3 PF02487.17 ORF57931 - 1.5 7.8 7.6 3.5 6.6 7.6 1.7 1 1 0 1 1 1 0 CLN3 protein Granin PF01271.17 ORF57931 - 1.9 7.3 34.7 2.2 7.1 34.7 1.0 1 0 0 1 1 1 0 Granin (chromogranin or secretogranin) CCSAP PF15748.5 ORF57931 - 3.9 7.6 17.7 4.9 7.3 17.7 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated DUF4045 PF13254.6 ORF57931 - 5.5 6.5 16.1 6.6 6.3 16.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) NPR3 PF03666.13 ORF57931 - 7 5.3 13.4 8.3 5.1 13.4 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF2370 PF10176.9 ORF57931 - 9.8 5.8 6.0 29 4.2 6.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) Ac81 PF05820.11 ORF57897 - 1.6 8.3 7.5 1.6 8.2 4.4 2.2 2 1 0 2 2 2 0 Baculoviridae AC81 Ac81 PF05820.11 ORF54934 - 1.6 8.3 7.5 1.6 8.2 4.4 2.2 2 1 0 2 2 2 0 Baculoviridae AC81 Peptidase_C97 PF05903.14 ORF54304 - 5.9e-33 113.8 0.1 7.5e-33 113.5 0.1 1.1 1 0 0 1 1 1 1 PPPDE putative peptidase domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks127.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks127.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks127.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks127.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:02:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CRC_subunit PF08624.10 ORF54018 - 1.1 9.7 7.0 3 8.3 0.2 2.8 1 1 2 3 3 3 0 Chromatin remodelling complex Rsc7/Swp82 subunit DUF2207 PF09972.9 ORF54018 - 2.6 6.7 6.1 3.2 6.4 6.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) IgGFc_binding PF17517.2 ORF53736 - 0.15 11.4 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 IgGFc binding protein PAP2 PF01569.21 ORF51295 - 0.03 14.1 0.6 0.048 13.4 0.6 1.3 1 0 0 1 1 1 0 PAP2 superfamily PRA1 PF03208.19 ORF50486 - 0.0065 16.1 3.5 0.013 15.1 3.5 1.4 1 0 0 1 1 1 1 PRA1 family protein PRKCSH_1 PF13015.6 ORF50456 - 1.6e-09 37.6 0.1 2e-09 37.3 0.1 1.1 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein PRKCSH PF07915.13 ORF50456 - 0.0022 18.9 0.2 0.0044 18.0 0.2 1.5 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein zf-RING_2 PF13639.6 ORF49986 - 0.00046 20.5 7.3 0.00046 20.5 7.3 1.9 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF49986 - 0.1 12.4 6.3 0.25 11.1 6.3 1.7 1 0 0 1 1 1 0 RING-like zinc finger UL11 PF11094.8 ORF49922 - 0.0092 15.8 1.2 0.0092 15.8 1.2 3.0 2 0 0 2 2 2 1 Membrane-associated tegument protein Ccdc124 PF06244.12 ORF48219 - 1.8e-22 80.3 33.9 1.1e-19 71.3 33.9 2.2 1 1 0 1 1 1 1 Coiled-coil domain-containing protein 124 /Oxs1 DUF3921 PF13060.6 ORF48219 - 0.005 16.8 0.4 1.1 9.3 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF3921) DUF533 PF04391.12 ORF48219 - 1.8 8.1 9.1 16 5.0 9.1 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF533) YABBY PF04690.13 ORF48219 - 4 8.0 18.1 3.4e+02 1.7 18.1 2.1 1 1 0 1 1 1 0 YABBY protein MutS_III PF05192.18 ORF42744 - 0.29 11.3 7.6 0.44 10.7 7.6 1.3 1 1 0 1 1 1 0 MutS domain III Ku_C PF03730.14 ORF42744 - 0.38 11.5 11.3 18 6.1 11.3 2.3 1 1 0 1 1 1 0 Ku70/Ku80 C-terminal arm DUF4522 PF15022.6 ORF42744 - 1.4 9.2 7.6 0.64 10.3 4.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4522) DUF1871 PF08958.10 ORF42112 - 0.11 12.9 0.1 0.74 10.2 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1871) Mobilization_B PF17511.2 ORF3756 - 0.28 11.6 2.8 0.35 11.2 0.7 2.0 2 0 0 2 2 2 0 Mobilization protein B Hamartin PF04388.12 ORF35444 - 3.6 6.2 4.9 3.9 6.0 4.9 1.1 1 0 0 1 1 1 0 Hamartin protein MFS_1 PF07690.16 ORF32740 - 4.7e-06 25.8 19.8 1.1e-05 24.5 19.8 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF32740 - 0.014 14.2 10.7 0.018 13.9 10.7 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter CRC_subunit PF08624.10 ORF31064 - 1.1 9.7 7.0 3 8.3 0.2 2.8 1 1 2 3 3 3 0 Chromatin remodelling complex Rsc7/Swp82 subunit DUF2207 PF09972.9 ORF31064 - 2.6 6.7 6.1 3.2 6.4 6.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) 3-dmu-9_3-mt PF06983.13 ORF3078 - 0.2 12.2 0.9 4.3 7.9 0.1 2.6 2 1 1 3 3 3 0 3-demethylubiquinone-9 3-methyltransferase EF-hand_5 PF13202.6 ORF2469 - 2.3e-22 77.4 0.4 4.1e-07 29.2 0.1 3.3 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF2469 - 8.9e-15 53.3 0.2 0.00051 19.8 0.1 3.3 3 0 0 3 3 3 3 EF-hand domain EF-hand_1 PF00036.32 ORF2469 - 1.6e-14 52.3 0.0 0.00094 18.6 0.0 3.4 2 1 1 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF2469 - 1.2e-13 51.3 0.4 0.00029 21.2 0.0 3.2 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF2469 - 3.5e-05 23.6 0.6 0.62 10.0 0.1 3.3 3 0 0 3 3 3 2 EF-hand domain pair Dockerin_1 PF00404.18 ORF2469 - 0.0012 19.0 0.7 3.8 7.8 0.1 3.1 2 1 1 3 3 3 2 Dockerin type I domain SPARC_Ca_bdg PF10591.9 ORF2469 - 0.016 15.5 0.8 5.8 7.3 0.0 2.9 2 1 1 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region UEV PF05743.13 ORF2469 - 0.044 13.7 0.5 23 4.9 0.0 3.1 1 1 1 3 3 3 0 UEV domain NUC205 PF08168.11 ORF2469 - 0.12 11.9 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 NUC205 domain zf-CCCH PF00642.24 ORF23668 - 0.0024 17.7 0.9 0.0054 16.6 0.9 1.6 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) SMAP PF15477.6 ORF22051 - 0.0062 17.5 1.5 0.0062 17.5 1.5 2.7 1 1 1 2 2 2 1 Small acidic protein family ERM PF00769.19 ORF22051 - 0.043 13.6 21.4 0.048 13.5 21.4 1.2 1 0 0 1 1 1 0 Ezrin/radixin/moesin family IFT57 PF10498.9 ORF22051 - 0.097 11.6 14.0 0.15 11.0 14.0 1.3 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Fez1 PF06818.15 ORF22051 - 0.11 12.9 15.0 0.15 12.5 15.0 1.2 1 0 0 1 1 1 0 Fez1 zf-C4H2 PF10146.9 ORF22051 - 0.24 11.7 11.4 0.36 11.1 11.4 1.3 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4407 PF14362.6 ORF22051 - 0.35 10.2 16.7 0.44 9.8 16.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AAA_13 PF13166.6 ORF22051 - 0.4 9.3 16.6 0.48 9.0 16.6 1.1 1 0 0 1 1 1 0 AAA domain DUF3435 PF11917.8 ORF22051 - 0.64 8.9 9.8 0.85 8.5 9.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) V_ATPase_I PF01496.19 ORF22051 - 7.6 4.3 11.8 9.7 4.0 11.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CIAPIN1 PF05093.13 ORF22051 - 8.3 7.0 9.2 7.5 7.1 7.3 1.9 1 1 1 2 2 2 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis MAPEG PF01124.18 ORF1858 - 1.2e-13 51.1 0.7 1.9e-13 50.5 0.7 1.3 1 1 0 1 1 1 1 MAPEG family SecY PF00344.20 ORF16674 - 2.4e-30 105.9 6.1 2.9e-30 105.6 6.1 1.0 1 0 0 1 1 1 1 SecY translocase YniB PF14002.6 ORF16674 - 1.7 8.4 5.8 0.094 12.5 0.6 1.5 2 0 0 2 2 2 0 YniB-like protein DUF1298 PF06974.13 ORF16273 - 2.3e-07 30.9 0.1 2.9e-07 30.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Ribosomal_S7 PF00177.21 ORF15685 - 5.3e-38 130.0 1.1 6.5e-38 129.7 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e TT_ORF2 PF02957.15 ORF15589 - 1.3 10.0 3.8 0.35 11.8 0.5 1.7 2 0 0 2 2 2 0 TT viral ORF2 STAG PF08514.11 ORF15589 - 2.7 7.9 6.0 2.3 8.1 2.2 2.1 2 0 0 2 2 2 0 STAG domain Mit_KHE1 PF10173.9 ORF150959 - 0.083 13.0 0.3 0.15 12.1 0.3 1.5 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Ribosomal_L12 PF00542.19 ORF15070 - 7.4e-22 77.5 1.9 1.3e-21 76.7 1.9 1.4 1 0 0 1 1 1 1 Ribosomal protein L7/L12 C-terminal domain CRC_subunit PF08624.10 ORF149576 - 1.1 9.7 7.0 3 8.3 0.2 2.8 1 1 2 3 3 3 0 Chromatin remodelling complex Rsc7/Swp82 subunit DUF2207 PF09972.9 ORF149576 - 2.6 6.7 6.1 3.2 6.4 6.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4834 PF16118.5 ORF148546 - 0.11 13.5 0.2 0.11 13.5 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) TRP PF06011.12 ORF148546 - 0.51 9.0 5.8 0.66 8.6 5.8 1.2 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Arf PF00025.21 ORF147744 - 4.8e-37 127.1 0.0 5.7e-37 126.9 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF147744 - 5.4e-06 26.6 0.0 8.6e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF147744 - 0.00012 21.7 0.0 0.00017 21.3 0.0 1.2 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF147744 - 0.00047 19.4 0.0 0.0011 18.3 0.0 1.6 1 1 0 1 1 1 1 G-protein alpha subunit MMR_HSR1 PF01926.23 ORF147744 - 0.019 15.0 0.0 0.046 13.8 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF147744 - 0.025 13.9 0.0 0.032 13.6 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF147744 - 0.047 13.1 0.0 0.07 12.5 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit MYEOV2 PF15004.6 ORF147744 - 0.17 12.3 1.0 0.34 11.4 0.6 1.7 2 0 0 2 2 2 0 Myeloma-overexpressed-like DUF1848 PF08902.11 ORF14549 - 0.047 13.4 1.1 0.06 13.1 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1848) AstE_AspA PF04952.14 ORF144701 - 0.025 13.7 0.2 0.034 13.2 0.2 1.1 1 0 0 1 1 1 0 Succinylglutamate desuccinylase / Aspartoacylase family YL1 PF05764.13 ORF143138 - 0.0043 17.2 12.1 0.005 17.0 12.1 1.2 1 0 0 1 1 1 1 YL1 nuclear protein Efg1 PF10153.9 ORF143138 - 2.1 8.8 11.2 11 6.4 8.3 2.2 2 0 0 2 2 2 0 rRNA-processing protein Efg1 C1_2 PF03107.16 ORF141460 - 0.056 13.8 5.8 0.056 13.8 5.8 4.3 2 2 1 3 3 3 0 C1 domain Ric8 PF10165.9 ORF141460 - 0.099 11.7 0.0 0.099 11.7 0.0 1.1 1 0 0 1 1 1 0 Guanine nucleotide exchange factor synembryn zinc-ribbons_6 PF07191.12 ORF141460 - 0.65 10.0 27.6 1.1 9.2 2.8 3.5 2 2 1 3 3 3 0 zinc-ribbons DZR PF12773.7 ORF141460 - 0.67 10.0 26.3 2.3 8.3 2.2 3.5 2 2 0 3 3 3 0 Double zinc ribbon zf-RVT PF13966.6 ORF141460 - 2.6 8.8 13.4 8.4 7.2 0.3 3.5 2 1 1 3 3 3 0 zinc-binding in reverse transcriptase zf-C3HC4_3 PF13920.6 ORF141460 - 7.5 6.5 24.3 1.7 8.6 1.8 4.0 2 1 2 4 4 4 0 Zinc finger, C3HC4 type (RING finger) CRC_subunit PF08624.10 ORF140648 - 1.1 9.7 7.0 3 8.3 0.2 2.8 1 1 2 3 3 3 0 Chromatin remodelling complex Rsc7/Swp82 subunit DUF2207 PF09972.9 ORF140648 - 2.6 6.7 6.1 3.2 6.4 6.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Hamartin PF04388.12 ORF14041 - 3.6 6.2 4.9 3.9 6.0 4.9 1.1 1 0 0 1 1 1 0 Hamartin protein DUF2752 PF10825.8 ORF13961 - 0.026 14.5 4.1 0.081 13.0 4.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2752) TTL PF03133.15 ORF138710 - 2.6e-21 76.1 0.1 4.2e-21 75.3 0.1 1.3 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF138710 - 9.7e-06 25.0 0.1 2.3e-05 23.8 0.0 1.6 2 0 0 2 2 2 1 YheC/D like ATP-grasp Dala_Dala_lig_C PF07478.13 ORF138710 - 0.017 14.7 0.2 0.042 13.4 0.0 1.6 2 0 0 2 2 2 0 D-ala D-ala ligase C-terminus ATPgrasp_ST PF14397.6 ORF138710 - 0.055 12.7 0.0 0.079 12.2 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Complex1_49kDa PF00346.19 ORF138710 - 0.093 11.8 0.0 0.16 11.0 0.0 1.4 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Sugar_tr PF00083.24 ORF138474 - 5.5e-13 48.6 8.2 6.7e-13 48.3 8.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF1232 PF06803.12 ORF138474 - 0.054 13.3 2.9 0.054 13.3 2.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1232) MFS_1 PF07690.16 ORF138474 - 8.2 5.2 16.3 0.13 11.2 1.0 2.6 1 1 1 2 2 2 0 Major Facilitator Superfamily NAAA-beta PF15508.6 ORF136652 - 8.7e-05 22.7 0.0 0.00016 21.9 0.0 1.4 1 0 0 1 1 1 1 beta subunit of N-acylethanolamine-hydrolyzing acid amidase Baculo_IE-1 PF05290.11 ORF136652 - 0.055 13.4 0.4 0.055 13.4 0.4 1.7 2 0 0 2 2 2 0 Baculovirus immediate-early protein (IE-0) Clat_adaptor_s PF01217.20 ORF136207 - 0.084 12.8 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Clathrin adaptor complex small chain PP2C PF00481.21 ORF133297 - 3.3e-15 56.4 0.0 7.4e-15 55.3 0.0 1.6 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF133297 - 0.0013 18.7 0.0 0.0017 18.3 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) DUF5559 PF17714.1 ORF13266 - 0.011 15.6 1.3 0.017 15.0 1.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5559) Thioredoxin PF00085.20 ORF130747 - 8.3e-16 57.9 0.0 1.3e-15 57.3 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_9 PF14595.6 ORF130747 - 0.057 13.2 0.0 0.08 12.7 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin TraF PF13728.6 ORF130747 - 0.09 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein NAAA-beta PF15508.6 ORF130060 - 0.00022 21.4 0.0 0.00044 20.5 0.0 1.5 1 0 0 1 1 1 1 beta subunit of N-acylethanolamine-hydrolyzing acid amidase BTG PF07742.12 ORF129799 - 0.35 10.7 2.0 0.39 10.6 0.1 1.9 2 0 0 2 2 2 0 BTG family PAP2 PF01569.21 ORF129160 - 9e-12 44.9 2.5 3e-11 43.2 2.5 1.9 1 1 0 1 1 1 1 PAP2 superfamily DUF1538 PF07556.11 ORF129160 - 0.00067 19.0 0.3 0.0011 18.4 0.3 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1538) LrgB PF04172.16 ORF129160 - 0.0051 16.4 0.2 0.009 15.6 0.2 1.4 1 0 0 1 1 1 1 LrgB-like family PAP2_3 PF14378.6 ORF129160 - 0.04 13.6 0.5 0.04 13.6 0.5 1.6 2 0 0 2 2 2 0 PAP2 superfamily C1_2 PF03107.16 ORF127675 - 0.056 13.8 5.8 0.056 13.8 5.8 4.3 2 2 1 3 3 3 0 C1 domain Ric8 PF10165.9 ORF127675 - 0.099 11.7 0.0 0.099 11.7 0.0 1.1 1 0 0 1 1 1 0 Guanine nucleotide exchange factor synembryn zinc-ribbons_6 PF07191.12 ORF127675 - 0.65 10.0 27.6 1.1 9.2 2.8 3.5 2 2 1 3 3 3 0 zinc-ribbons DZR PF12773.7 ORF127675 - 0.67 10.0 26.3 2.3 8.3 2.2 3.5 2 2 0 3 3 3 0 Double zinc ribbon zf-RVT PF13966.6 ORF127675 - 2.6 8.8 13.4 8.4 7.2 0.3 3.5 2 1 1 3 3 3 0 zinc-binding in reverse transcriptase zf-C3HC4_3 PF13920.6 ORF127675 - 7.5 6.5 24.3 1.7 8.6 1.8 4.0 2 1 2 4 4 4 0 Zinc finger, C3HC4 type (RING finger) AT_hook PF02178.19 ORF126923 - 0.0055 16.4 2.2 0.024 14.5 2.2 2.2 1 0 0 1 1 1 1 AT hook motif BRCC36_C PF18110.1 ORF126923 - 0.033 14.3 1.3 0.055 13.6 0.6 1.9 1 1 0 1 1 1 0 BRCC36 C-terminal helical domain CLAMP PF14769.6 ORF126140 - 8.7e-11 42.2 0.9 1.4e-10 41.5 0.9 1.4 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 DUF3828 PF12883.7 ORF12467 - 3.6e-08 33.8 4.1 0.00069 20.0 0.1 3.3 2 1 1 3 3 3 2 Protein of unknown function (DUF3828) DUF5071 PF16804.5 ORF12467 - 0.0023 18.2 0.0 0.0038 17.5 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5071) DUF4878 PF12870.7 ORF12467 - 0.081 13.2 0.1 0.19 12.1 0.0 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4878) Chordopox_RPO7 PF05864.12 ORF124039 - 6.1 7.2 8.9 17 5.8 6.0 2.9 1 1 1 2 2 2 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Elong-fact-P_C PF09285.11 ORF123487 - 2e-26 91.5 0.5 5.1e-26 90.2 0.5 1.7 1 0 0 1 1 1 1 Elongation factor P, C-terminal EFP_N PF08207.12 ORF123487 - 4.2e-24 84.3 0.0 1.5e-23 82.6 0.0 1.9 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 ORF123487 - 6.3e-23 80.6 0.0 1.2e-22 79.7 0.0 1.5 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain START PF01852.19 ORF12313 - 5.6e-20 71.7 0.0 6.8e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 START domain JmjC PF02373.22 ORF12224 - 7e-38 129.6 0.3 9.2e-38 129.2 0.3 1.2 1 0 0 1 1 1 1 JmjC domain, hydroxylase EF-hand_7 PF13499.6 ORF121912 - 2.7e-10 40.5 0.5 1.4e-09 38.3 0.1 2.1 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF121912 - 3.6e-08 32.4 3.7 0.0001 21.6 0.8 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF121912 - 1e-05 25.1 2.0 0.16 12.0 0.1 3.1 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF121912 - 0.00033 20.0 1.5 0.44 10.1 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF121912 - 0.058 13.3 3.0 2.4 8.1 1.0 2.6 2 0 0 2 2 2 0 EF-hand domain pair Period_C PF12114.8 ORF121302 - 0.0056 16.3 0.4 0.0084 15.7 0.4 1.2 1 0 0 1 1 1 1 Period protein 2/3C-terminal region GSHPx PF00255.19 ORF118006 - 5.8e-33 112.7 0.0 7.8e-33 112.3 0.0 1.2 1 0 0 1 1 1 1 Glutathione peroxidase RLI PF04068.15 ORF114765 - 0.065 13.1 2.7 2.3 8.1 0.1 3.1 3 0 0 3 3 3 0 Possible Fer4-like domain in RNase L inhibitor, RLI DUF1179 PF06678.11 ORF109012 - 0.031 14.3 0.3 0.067 13.2 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1179) rve_2 PF13333.6 ORF109012 - 0.15 12.3 0.8 0.33 11.1 0.5 1.8 2 0 0 2 2 2 0 Integrase core domain bZIP_1 PF00170.21 ORF109012 - 0.73 10.0 8.1 0.29 11.3 4.0 2.4 2 0 0 2 2 2 0 bZIP transcription factor Ins_P5_2-kin PF06090.12 ORF106892 - 1.8e-11 44.1 0.2 2.2e-11 43.8 0.2 1.0 1 0 0 1 1 1 1 Inositol-pentakisphosphate 2-kinase Syntaxin-6_N PF09177.11 ORF10418 - 0.036 14.6 6.4 0.042 14.4 2.3 2.6 2 1 1 3 3 3 0 Syntaxin 6, N-terminal Tektin PF03148.14 ORF10418 - 0.05 12.4 6.2 0.013 14.3 2.0 1.9 1 1 1 2 2 2 0 Tektin family YtxH PF12732.7 ORF10418 - 0.055 14.0 0.9 0.055 14.0 0.9 2.6 3 0 0 3 3 3 0 YtxH-like protein DUSP PF06337.12 ORF10418 - 0.081 13.6 2.9 0.17 12.5 2.9 1.5 1 1 0 1 1 1 0 DUSP domain FapA PF03961.13 ORF10418 - 0.1 11.1 4.7 0.13 10.9 4.7 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Sacchrp_dh_NADP PF03435.18 ORF10418 - 0.14 12.4 0.7 0.27 11.5 0.1 1.7 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain RFC1 PF08519.12 ORF10418 - 0.18 12.0 2.3 0.39 10.9 1.1 1.9 1 1 1 2 2 2 0 Replication factor RFC1 C terminal domain DUF4446 PF14584.6 ORF10418 - 0.3 11.0 4.7 0.067 13.2 1.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) NLPC_P60 PF00877.19 ORF103709 - 1.6e-34 118.1 0.1 2.2e-34 117.6 0.1 1.2 1 0 0 1 1 1 1 NlpC/P60 family Peptidase_C92 PF05708.12 ORF103709 - 0.00067 19.8 0.0 0.62 10.1 0.0 2.3 1 1 1 2 2 2 2 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family LRAT PF04970.13 ORF103709 - 0.019 15.3 0.0 0.04 14.2 0.0 1.5 1 0 0 1 1 1 0 Lecithin retinol acyltransferase DHQS PF01959.16 ORF103709 - 0.03 13.2 0.0 0.048 12.6 0.0 1.2 1 0 0 1 1 1 0 3-dehydroquinate synthase II CHAP PF05257.16 ORF103709 - 0.076 13.6 0.0 0.13 12.9 0.0 1.4 1 0 0 1 1 1 0 CHAP domain DUF1287 PF06940.11 ORF103709 - 0.11 12.2 0.0 0.29 10.8 0.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF1287) IgGFc_binding PF17517.2 ORF103683 - 0.15 11.4 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 IgGFc binding protein tRNA_U5-meth_tr PF05958.11 ORF103267 - 3.6e-29 101.9 0.0 5.8e-28 97.9 0.0 1.9 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 ORF103267 - 3.2e-14 53.0 0.0 4e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF103267 - 1.3e-09 38.7 0.0 2.3e-09 37.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF103267 - 6.3e-08 32.6 0.0 9.3e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 ORF103267 - 9.9e-08 31.4 0.0 1.4e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Met_10 PF02475.16 ORF103267 - 6.1e-07 29.4 0.1 7.3e-07 29.1 0.1 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_11 PF08241.12 ORF103267 - 3.9e-06 27.4 0.0 8.7e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF103267 - 2.5e-05 23.9 0.0 3.3e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 ORF103267 - 4.3e-05 23.2 0.0 5.8e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 ORF103267 - 0.00019 21.3 0.0 0.00023 21.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 ORF103267 - 0.00048 19.8 0.0 0.00073 19.2 0.0 1.3 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_15 PF09445.10 ORF103267 - 0.00061 19.4 0.0 0.00079 19.0 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_4 PF02390.17 ORF103267 - 0.00071 19.1 0.0 0.001 18.6 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Ubie_methyltran PF01209.18 ORF103267 - 0.0024 17.2 0.0 0.0036 16.7 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family UPF0020 PF01170.18 ORF103267 - 0.003 17.3 0.0 0.043 13.5 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.13 ORF103267 - 0.0076 15.7 0.0 0.01 15.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MetW PF07021.12 ORF103267 - 0.013 15.1 0.0 0.14 11.7 0.0 2.1 1 1 1 2 2 2 0 Methionine biosynthesis protein MetW CMAS PF02353.20 ORF103267 - 0.038 13.3 0.0 0.051 12.9 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase TPMT PF05724.11 ORF103267 - 0.047 13.3 0.0 0.09 12.4 0.0 1.4 2 0 0 2 2 2 0 Thiopurine S-methyltransferase (TPMT) Methyltrans_SAM PF10672.9 ORF103267 - 0.05 12.8 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase DOT1 PF08123.13 ORF103267 - 0.084 12.4 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 Aldose_epim PF01263.20 ORF101741 - 6.7e-30 104.4 0.0 1e-28 100.5 0.0 1.9 1 1 0 1 1 1 1 Aldose 1-epimerase p450 PF00067.22 ORF10125 - 4.4e-37 127.9 0.0 5e-37 127.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 ProQ PF04352.13 ORF10125 - 0.065 13.1 0.0 2.8 7.9 0.0 2.1 1 1 1 2 2 2 0 ProQ/FINO family LapA_dom PF06305.11 NODE_37965_length_559_cov_2.112595_g30677_i0forward_frame_1 - 1.5e-09 37.5 2.8 5.4e-09 35.7 1.2 2.4 2 0 0 2 2 2 1 Lipopolysaccharide assembly protein A domain TPR_7 PF13176.6 NODE_37965_length_559_cov_2.112595_g30677_i0forward_frame_1 - 0.0005 19.9 1.6 0.017 15.1 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_37965_length_559_cov_2.112595_g30677_i0forward_frame_1 - 0.0028 18.1 0.1 0.011 16.2 0.0 2.0 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_37965_length_559_cov_2.112595_g30677_i0forward_frame_1 - 0.0062 16.6 1.5 8.3 6.8 0.0 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat T4SS_TraI PF16932.5 NODE_37965_length_559_cov_2.112595_g30677_i0forward_frame_1 - 0.0089 15.2 0.0 0.016 14.3 0.0 1.4 1 0 0 1 1 1 1 Type IV secretory system, conjugal DNA-protein transfer TPR_14 PF13428.6 NODE_37965_length_559_cov_2.112595_g30677_i0forward_frame_1 - 0.0092 16.7 3.8 2 9.5 0.0 3.9 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_37965_length_559_cov_2.112595_g30677_i0forward_frame_1 - 0.0095 16.2 2.3 0.045 14.0 1.0 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_37965_length_559_cov_2.112595_g30677_i0forward_frame_1 - 0.083 12.7 0.0 1.8 8.5 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat Trans_coact PF16805.5 NODE_37959_length_559_cov_41.629771_g30671_i0reverse_frame_1 - 0.041 14.0 0.1 0.1 12.7 0.1 1.6 1 0 0 1 1 1 0 Phage late-transcription coactivator ADH_zinc_N PF00107.26 NODE_37957_length_559_cov_76.110687_g30669_i0reverse_frame_1 - 1.5e-15 57.3 0.0 2.1e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 NODE_37957_length_559_cov_76.110687_g30669_i0reverse_frame_1 - 8.3e-08 32.0 0.0 9.6e-08 31.8 0.0 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 NODE_37957_length_559_cov_76.110687_g30669_i0reverse_frame_1 - 0.00031 21.8 0.0 0.00052 21.1 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Cnn_1N PF07989.11 NODE_37913_length_560_cov_3.617143_g30627_i0forward_frame_1 - 0.0098 16.0 5.5 0.021 15.0 5.5 1.5 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 HemolysinCabind PF00353.19 NODE_37911_length_560_cov_6.885714_g30625_i0forward_frame_1 - 7.9e-20 70.5 39.5 1.4e-10 41.0 17.2 3.6 4 0 0 4 4 4 2 RTX calcium-binding nonapeptide repeat (4 copies) HCBP_related PF06594.11 NODE_37911_length_560_cov_6.885714_g30625_i0forward_frame_1 - 2.5e-08 33.7 1.4 6.3e-08 32.4 0.2 2.4 2 0 0 2 2 2 1 Haemolysin-type calcium binding protein related domain CDC45 PF02724.14 NODE_37891_length_560_cov_151.500952_g30606_i0reverse_frame_1 - 0.69 8.1 4.8 0.88 7.8 4.8 1.1 1 0 0 1 1 1 0 CDC45-like protein FNIP PF05725.12 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 2.4e-70 232.5 52.1 9.2e-13 48.1 1.1 5.0 2 1 5 7 7 7 7 FNIP Repeat LRR_5 PF13306.6 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 1.2e-09 38.2 1.8 0.00014 21.8 0.1 2.7 1 1 2 3 3 3 3 BspA type Leucine rich repeat region (6 copies) NosD PF05048.13 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 0.00048 19.5 0.0 0.00056 19.2 0.0 1.2 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Glyco_hydro_65C PF03633.15 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 0.0033 17.3 7.5 75 3.4 0.0 7.4 9 0 0 9 9 9 0 Glycosyl hydrolase family 65, C-terminal domain Imm40 PF15569.6 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 0.005 16.9 0.0 2.7 8.1 0.0 3.8 1 1 4 5 5 5 1 Immunity protein 40 DUF5315 PF17242.2 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_1 - 0.12 12.2 7.6 12 5.8 0.1 5.7 2 2 6 8 8 8 0 Disordered region of unknown function (DUF5315) Peptidase_M16_C PF05193.21 NODE_37880_length_560_cov_770.554286_g30598_i0forward_frame_1 - 0.0069 16.4 0.1 21 5.0 0.0 4.8 1 1 3 4 4 4 2 Peptidase M16 inactive domain SAC3_GANP PF03399.16 NODE_37869_length_561_cov_2.517110_g30589_i0reverse_frame_1 - 0.0018 17.7 0.8 0.0022 17.4 0.8 1.1 1 0 0 1 1 1 1 SAC3/GANP family Kringle PF00051.18 NODE_37869_length_561_cov_2.517110_g30589_i0reverse_frame_1 - 0.006 16.9 0.9 0.27 11.6 0.2 2.2 2 0 0 2 2 2 2 Kringle domain PI3Ka PF00613.20 NODE_37868_length_561_cov_2.634981_g30588_i0forward_frame_1 - 6.2e-15 55.1 0.1 8.3e-15 54.7 0.1 1.1 1 0 0 1 1 1 1 Phosphoinositide 3-kinase family, accessory domain (PIK domain) PI3K_C2 PF00792.24 NODE_37868_length_561_cov_2.634981_g30588_i0forward_frame_1 - 0.00034 20.6 0.0 0.00072 19.5 0.0 1.6 1 0 0 1 1 1 1 Phosphoinositide 3-kinase C2 Abp2 PF09441.10 NODE_37857_length_561_cov_60.794677_g30577_i0forward_frame_1 - 0.3 11.2 5.5 4 7.5 0.6 2.2 1 1 1 2 2 2 0 ARS binding protein 2 OB_NTP_bind PF07717.16 NODE_37828_length_561_cov_229.235741_g30549_i0reverse_frame_1 - 4.7e-21 75.0 0.0 7.6e-21 74.3 0.0 1.3 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold rpo30_N PF12410.8 NODE_37815_length_562_cov_1.656546_g30536_i0forward_frame_3 - 0.005 16.7 0.8 0.019 14.9 0.9 1.7 1 1 1 2 2 2 1 Poxvirus DNA dependent RNA polymerase 30kDa subunit Ntox30 PF15532.6 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_3 - 0.028 14.8 0.0 0.059 13.8 0.0 1.5 2 0 0 2 2 2 0 Bacterial toxin 30 Toxin_16 PF07945.11 NODE_37808_length_562_cov_3.136622_g30529_i0reverse_frame_2 - 0.35 10.8 9.0 0.86 9.5 1.9 2.5 2 0 0 2 2 2 0 Janus-atracotoxin Ins134_P3_kin PF05770.11 NODE_37800_length_562_cov_77.459203_g30521_i0reverse_frame_3 - 0.11 12.0 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain Auto_anti-p27 PF06677.12 NODE_37799_length_562_cov_81.878558_g30520_i0forward_frame_2 - 0.23 11.6 0.0 0.23 11.6 0.0 2.8 4 0 0 4 4 4 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) SurA_N PF09312.11 NODE_37790_length_562_cov_98.502846_g30511_i0reverse_frame_2 - 0.079 13.0 1.1 0.079 13.0 1.1 1.9 2 1 0 2 2 2 0 SurA N-terminal domain Herpes_UL49_2 PF04823.12 NODE_37782_length_562_cov_155.798861_g30503_i0reverse_frame_3 - 0.42 10.7 1.7 0.65 10.1 1.1 1.6 1 1 1 2 2 2 0 Herpesvirus UL49 tegument protein RCC1_2 PF13540.6 NODE_37775_length_562_cov_274.698292_g30496_i0reverse_frame_3 - 1.4e-09 37.5 10.0 0.29 11.0 0.0 5.2 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Ntox23 PF15528.6 NODE_37775_length_562_cov_274.698292_g30496_i0reverse_frame_3 - 0.019 15.1 0.6 33 4.6 0.0 3.1 3 0 0 3 3 3 0 Bacterial toxin 23 FtsQ PF03799.15 NODE_37775_length_562_cov_274.698292_g30496_i0reverse_frame_3 - 0.021 15.6 0.1 20 6.0 0.0 3.5 1 1 2 4 4 4 0 Cell division protein FtsQ PH_TFIIH PF08567.11 NODE_37775_length_562_cov_274.698292_g30496_i0reverse_frame_3 - 0.04 14.2 0.9 2.4 8.5 0.0 3.1 2 2 1 3 3 3 0 TFIIH p62 subunit, N-terminal domain UPF0231 PF06062.11 NODE_37775_length_562_cov_274.698292_g30496_i0reverse_frame_3 - 0.12 12.6 0.4 23 5.3 0.0 3.2 1 1 3 4 4 4 0 Uncharacterised protein family (UPF0231) AP-5_subunit_s1 PF15001.6 NODE_37774_length_562_cov_351.265655_g30495_i0reverse_frame_2 - 0.016 15.2 1.4 0.62 10.0 0.1 2.1 2 0 0 2 2 2 0 AP-5 complex subunit sigma-1 NAD_kinase PF01513.21 NODE_37766_length_562_cov_11221.518027_g30488_i0forward_frame_3 - 0.077 12.2 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 ATP-NAD kinase Rad21_Rec8 PF04824.16 NODE_37763_length_563_cov_2.469697_g30486_i0reverse_frame_3 - 0.057 12.7 0.0 0.092 12.1 0.0 1.3 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein RNA_bind PF08675.11 NODE_37757_length_563_cov_3.556818_g30480_i0reverse_frame_3 - 0.012 15.6 0.0 0.039 14.0 0.0 1.8 2 0 0 2 2 2 0 RNA binding domain DinB PF05163.12 NODE_37717_length_563_cov_4650.662879_g30442_i0reverse_frame_3 - 0.11 12.5 0.5 0.17 11.8 0.5 1.3 1 0 0 1 1 1 0 DinB family DUF5136 PF17199.4 NODE_37717_length_563_cov_4650.662879_g30442_i0reverse_frame_2 - 0.047 13.4 1.2 0.047 13.4 1.2 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF5136) KRTAP7 PF15034.6 NODE_37716_length_564_cov_1.570888_g30441_i0reverse_frame_3 - 0.036 15.0 0.7 0.083 13.9 0.1 1.9 2 0 0 2 2 2 0 KRTAP type 7 family POTRA PF07244.15 NODE_37709_length_564_cov_3.359168_g30434_i0forward_frame_2 - 0.027 15.0 0.2 3.4 8.3 0.0 2.2 2 0 0 2 2 2 0 Surface antigen variable number repeat Ig_3 PF13927.6 NODE_37709_length_564_cov_3.359168_g30434_i0forward_frame_2 - 0.056 14.1 1.2 0.1 13.2 0.7 1.7 2 0 0 2 2 2 0 Immunoglobulin domain Myticin-prepro PF10690.9 NODE_37705_length_564_cov_4.319471_g30430_i0reverse_frame_3 - 0.045 14.0 1.4 0.045 14.0 1.4 2.2 3 0 0 3 3 3 0 Myticin pre-proprotein from the mussel Calc_CGRP_IAPP PF00214.19 NODE_37705_length_564_cov_4.319471_g30430_i0forward_frame_3 - 0.22 11.9 1.1 0.31 11.4 1.1 1.3 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family TTL PF03133.15 NODE_37693_length_564_cov_77.071834_g30420_i0forward_frame_2 - 5.7e-43 147.1 0.8 6.8e-43 146.9 0.8 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_37693_length_564_cov_77.071834_g30420_i0forward_frame_2 - 0.0074 15.6 0.4 0.098 11.9 0.1 2.4 2 1 0 2 2 2 1 YheC/D like ATP-grasp ATP-grasp_3 PF02655.14 NODE_37693_length_564_cov_77.071834_g30420_i0forward_frame_2 - 0.019 15.0 0.3 0.044 13.8 0.0 1.6 2 1 0 2 2 2 0 ATP-grasp domain DUF4241 PF14025.6 NODE_37693_length_564_cov_77.071834_g30420_i0forward_frame_2 - 0.11 12.7 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4241) Spc7 PF08317.11 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 7.1e-06 25.1 17.7 9e-06 24.8 17.7 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein CENP-F_leu_zip PF10473.9 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.0046 17.0 1.7 0.0046 17.0 1.7 2.2 2 0 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 KELK PF15796.5 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.012 16.0 11.0 0.012 16.0 11.0 2.2 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase MAP7 PF05672.11 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.014 15.1 21.3 0.019 14.7 21.3 1.1 1 0 0 1 1 1 0 MAP7 (E-MAP-115) family ABC_tran_CTD PF16326.5 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.022 15.0 10.8 0.022 15.0 10.8 2.3 1 1 1 2 2 2 0 ABC transporter C-terminal domain GAS PF13851.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.097 12.0 16.2 0.16 11.3 16.2 1.4 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding SOAR PF16533.5 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.39 10.7 10.3 0.038 14.0 3.5 2.2 1 1 1 2 2 2 0 STIM1 Orai1-activating region DUF1664 PF07889.12 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 0.48 10.5 4.0 0.92 9.6 3.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) CorA PF01544.18 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.3 8.3 4.8 1.7 7.9 4.8 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Prominin PF05478.11 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.4 6.8 4.9 1.7 6.5 4.9 1.1 1 0 0 1 1 1 0 Prominin APG6_N PF17675.1 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.7 9.2 23.6 3.4 8.2 23.6 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.7 6.4 8.5 2 6.2 8.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF572 PF04502.13 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 1.8 8.1 12.9 2.2 7.8 12.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF572) Spore_III_AF PF09581.10 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 2 8.4 8.0 2.4 8.1 8.0 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Fmp27_WPPW PF10359.9 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 2 7.2 6.8 2.4 6.9 6.8 1.3 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF4201 PF13870.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 3.4 7.4 14.2 12 5.6 13.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) OmpH PF03938.14 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 3.4 8.0 23.1 0.83 10.0 14.1 2.1 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Cauli_AT PF03233.13 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 3.6 7.5 5.0 4.4 7.2 2.4 2.1 1 1 1 2 2 2 0 Aphid transmission protein DUF3584 PF12128.8 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 3.6 5.0 19.8 4.3 4.7 19.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) UPF0449 PF15136.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 4.4 7.8 10.9 2.5 8.6 1.7 3.0 1 1 2 3 3 3 0 Uncharacterised protein family UPF0449 AAA_13 PF13166.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 4.8 5.7 14.1 0.73 8.4 10.1 1.5 1 1 1 2 2 2 0 AAA domain ATG16 PF08614.11 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 5.4 7.2 27.6 9.2 6.4 24.7 2.3 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF4407 PF14362.6 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 5.9 6.2 18.1 7.9 5.7 18.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) XhlA PF10779.9 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 6.5 7.0 7.8 17 5.7 0.9 2.4 1 1 1 2 2 2 0 Haemolysin XhlA DUF724 PF05266.14 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 7.2 6.4 12.2 10 5.9 12.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) CDC37_N PF03234.14 NODE_37674_length_564_cov_214.160681_g30401_i0forward_frame_3 - 9.7 7.1 10.2 0.64 10.9 3.3 2.0 1 1 1 2 2 2 0 Cdc37 N terminal kinase binding HemeBinding_Shp PF11545.8 ORF97527 - 0.013 15.5 0.1 0.019 14.9 0.1 1.2 1 0 0 1 1 1 0 Cell surface heme-binding protein Shp Tub_N PF16322.5 ORF97527 - 0.091 13.2 11.0 0.12 12.7 11.0 1.1 1 0 0 1 1 1 0 Tubby N-terminal Cupin_8 PF13621.6 ORF97167 - 7.8e-11 42.2 0.1 1.1e-10 41.7 0.1 1.2 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF97167 - 4.3e-06 26.4 0.0 4.9e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Cupin superfamily protein Cupin_1 PF00190.22 ORF97167 - 0.017 14.7 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Cupin Cupin_2 PF07883.11 ORF97167 - 0.02 14.6 0.0 0.035 13.8 0.0 1.4 1 0 0 1 1 1 0 Cupin domain DUF3209 PF11483.8 ORF97167 - 0.19 12.2 0.0 0.28 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3209) DUF3524 PF12038.8 ORF957 - 0.0081 16.0 0.6 0.011 15.6 0.5 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF3524) Zip PF02535.22 ORF957 - 0.072 12.3 1.2 0.093 11.9 1.2 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter AhpC-TSA PF00578.21 ORF93456 - 4.4e-33 113.8 0.1 5.5e-33 113.5 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF93456 - 3.6e-12 46.2 0.0 4.5e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF93456 - 1.1e-06 28.4 0.1 1.9e-06 27.6 0.1 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 ORF93456 - 0.00012 21.9 0.0 0.00082 19.3 0.0 2.1 2 0 0 2 2 2 1 SCO1/SenC JmjC PF02373.22 ORF93025 - 8e-16 58.5 1.5 8.6e-16 58.4 0.2 1.7 2 1 0 2 2 2 1 JmjC domain, hydroxylase Cupin_8 PF13621.6 ORF93025 - 2.2e-07 30.9 0.1 4.2e-07 29.9 0.1 1.4 1 0 0 1 1 1 1 Cupin-like domain GPI PF06560.11 ORF93025 - 0.067 12.5 0.1 0.16 11.2 0.0 1.7 1 1 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.11 ORF93025 - 0.2 11.4 0.0 0.44 10.3 0.0 1.5 1 0 0 1 1 1 0 Cupin domain TPR_1 PF00515.28 ORF93025 - 6.1 6.8 7.0 23 5.0 0.2 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat Defb50 PF17546.2 ORF91345 - 0.11 12.4 0.3 0.44 10.5 0.1 2.2 2 0 0 2 2 2 0 Beta defensin 50 Thioredoxin PF00085.20 ORF89365 - 3.9e-17 62.1 0.1 6.4e-17 61.4 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF89365 - 2.1e-05 24.8 0.6 0.00018 21.7 0.1 2.4 2 1 1 3 3 3 1 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF89365 - 0.0001 22.7 0.1 0.00057 20.3 0.1 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF89365 - 0.00018 21.7 0.2 0.0003 20.9 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF89365 - 0.00043 19.7 0.0 0.00066 19.1 0.0 1.3 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 ORF89365 - 0.0083 16.0 0.1 0.012 15.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family DUF836 PF05768.14 ORF89365 - 0.0091 16.4 0.1 0.019 15.4 0.1 1.5 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Glutaredoxin PF00462.24 ORF89365 - 0.16 12.2 0.1 0.45 10.8 0.0 1.8 2 0 0 2 2 2 0 Glutaredoxin RNase_H PF00075.24 ORF89099 - 2.1e-09 37.7 0.1 3.7e-09 36.9 0.1 1.4 1 0 0 1 1 1 1 RNase H Thioredoxin PF00085.20 ORF88262 - 3.9e-17 62.1 0.1 6.4e-17 61.4 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF88262 - 2.1e-05 24.8 0.6 0.00018 21.7 0.1 2.4 2 1 1 3 3 3 1 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF88262 - 0.0001 22.7 0.1 0.00057 20.3 0.1 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF88262 - 0.00018 21.6 0.2 0.0003 20.9 0.2 1.3 1 0 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF88262 - 0.00047 19.6 0.0 0.00073 19.0 0.0 1.3 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 ORF88262 - 0.0083 16.0 0.1 0.012 15.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family DUF836 PF05768.14 ORF88262 - 0.0094 16.3 0.1 0.02 15.3 0.1 1.5 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Glutaredoxin PF00462.24 ORF88262 - 0.17 12.1 0.1 0.45 10.8 0.0 1.7 2 0 0 2 2 2 0 Glutaredoxin ABC2_membrane PF01061.24 ORF8571 - 1.7e-32 112.6 17.4 2.3e-32 112.1 17.4 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF8571 - 7.1e-26 91.1 18.8 7.8e-26 91.0 18.8 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 ORF8571 - 3.2e-19 69.3 13.2 3.4e-19 69.2 13.2 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 ORF8571 - 0.00013 22.0 11.4 0.00023 21.2 10.2 2.0 1 1 0 1 1 1 1 ABC-2 family transporter protein DUF2374 PF09574.10 ORF8571 - 0.38 10.6 7.2 3.8 7.4 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (Duf2374) DUF2116 PF09889.9 ORF81683 - 4.1 7.5 5.8 40 4.3 0.0 3.1 3 0 0 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Ribosomal_L18 PF17135.4 ORF81611 - 2.1e-90 301.2 1.1 2.2e-90 301.1 1.1 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 ORF81611 - 0.0054 17.4 1.3 0.013 16.2 0.0 2.3 2 1 0 2 2 2 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A S1 PF00575.23 ORF79481 - 2.9e-10 40.3 0.1 2.9e-09 37.1 0.1 2.2 2 0 0 2 2 2 1 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF79481 - 0.32 11.0 2.1 1.6 8.8 1.2 2.6 1 1 1 2 2 2 0 RNase II-type exonuclease C-terminal S1 domain DUF2559 PF10832.8 ORF79410 - 0.073 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2559) ODC_AZ PF02100.17 ORF78679 - 0.0053 16.7 0.2 0.0081 16.1 0.2 1.3 1 0 0 1 1 1 1 Ornithine decarboxylase antizyme DUF3524 PF12038.8 ORF77350 - 0.0081 16.0 0.6 0.011 15.6 0.5 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF3524) Zip PF02535.22 ORF77350 - 0.072 12.3 1.2 0.093 11.9 1.2 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter PQQ_2 PF13360.6 ORF71469 - 0.043 13.4 0.0 0.066 12.8 0.0 1.3 1 1 0 1 1 1 0 PQQ-like domain DUF1631 PF07793.11 ORF71469 - 0.12 10.8 0.0 0.16 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) zf-C2H2_11 PF16622.5 ORF67766 - 0.063 13.1 3.5 0.063 13.1 3.5 2.7 2 1 0 2 2 2 0 zinc-finger C2H2-type c-SKI_SMAD_bind PF08782.10 ORF67766 - 2.3 8.5 4.4 0.59 10.4 0.8 1.8 2 0 0 2 2 2 0 c-SKI Smad4 binding domain HemeBinding_Shp PF11545.8 ORF66136 - 0.013 15.5 0.1 0.019 14.9 0.1 1.2 1 0 0 1 1 1 0 Cell surface heme-binding protein Shp Tub_N PF16322.5 ORF66136 - 0.091 13.2 11.0 0.12 12.7 11.0 1.1 1 0 0 1 1 1 0 Tubby N-terminal zf-RING_2 PF13639.6 ORF63304 - 1.4e-13 51.0 7.6 2e-13 50.4 7.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF63304 - 1.8e-10 40.3 2.8 3.6e-10 39.4 2.8 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF63304 - 1.3e-09 37.7 6.7 2e-09 37.1 6.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF63304 - 5.6e-09 35.7 5.6 8.2e-09 35.2 5.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF63304 - 7.3e-08 32.6 7.9 1.6e-07 31.5 7.9 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF63304 - 1.2e-05 25.1 6.6 1.8e-05 24.6 6.6 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF63304 - 4.3e-05 23.3 5.9 6.8e-05 22.7 5.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF63304 - 0.00015 21.8 2.5 0.0003 20.8 2.5 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF63304 - 0.00022 21.2 3.5 0.00039 20.4 3.5 1.4 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF63304 - 0.00078 19.2 6.7 0.0012 18.7 6.7 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF63304 - 0.012 15.4 6.5 0.019 14.7 6.5 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn_ribbon_17 PF17120.5 ORF63304 - 0.025 14.2 6.0 0.049 13.3 6.0 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING-like PF08746.11 ORF63304 - 0.06 13.7 9.3 0.11 12.9 9.3 1.5 1 1 0 1 1 1 0 RING-like domain SAP PF02037.27 ORF63304 - 0.076 12.8 0.9 0.97 9.3 0.2 2.7 2 0 0 2 2 2 0 SAP domain zf-C3HC4_4 PF15227.6 ORF63304 - 0.12 12.6 6.6 0.36 11.0 6.7 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C2H2_6 PF13912.6 ORF63304 - 0.14 12.2 2.9 1.5 8.9 0.1 3.2 4 0 0 4 4 4 0 C2H2-type zinc finger RINGv PF12906.7 ORF63304 - 0.19 11.9 6.0 0.48 10.6 6.0 1.7 1 1 0 1 1 1 0 RING-variant domain FANCL_C PF11793.8 ORF63304 - 0.4 10.9 8.3 2.8 8.2 8.3 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain PHD PF00628.29 ORF63304 - 0.54 10.2 7.5 0.84 9.6 7.5 1.3 1 0 0 1 1 1 0 PHD-finger Ras PF00071.22 ORF61619 - 1.4e-42 145.0 1.0 1.7e-42 144.8 1.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF61619 - 6.3e-20 71.6 0.1 1e-19 70.9 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF61619 - 6.7e-06 25.7 0.2 9.4e-06 25.2 0.2 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MFS_MOT1 PF16983.5 ORF61592 - 0.089 13.2 1.6 0.13 12.6 1.2 1.6 1 1 0 1 1 1 0 Molybdate transporter of MFS superfamily zf-C3HC4 PF00097.25 ORF61592 - 3.2 7.7 7.2 29 4.7 0.1 2.8 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF61592 - 3.6 7.8 6.9 22 5.3 3.1 2.6 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING SQS_PSY PF00494.19 ORF60557 - 0.012 15.1 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 0 Squalene/phytoene synthase Ogr_Delta PF04606.12 ORF60557 - 0.15 12.0 0.7 0.27 11.3 0.7 1.3 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger Methyltransf_1N PF02870.15 ORF59909 - 0.11 13.3 0.0 0.21 12.4 0.0 1.5 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ODV-E18 PF10717.9 ORF56491 - 0.23 11.3 1.2 22 5.0 0.2 2.4 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 RabGAP-TBC PF00566.18 ORF53840 - 1.1e-23 84.0 8.7 2e-23 83.2 8.7 1.4 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF1357 PF07094.11 ORF53840 - 0.014 15.5 0.4 0.021 14.9 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1357) MT PF12777.7 ORF53296 - 0.0011 18.0 0.1 0.0011 18.0 0.1 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Carbam_trans_N PF02543.15 ORF53296 - 0.026 14.2 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus Filament_head PF04732.14 ORF52164 - 0.018 15.9 5.6 1.1 10.1 1.1 2.1 2 0 0 2 2 2 0 Intermediate filament head (DNA binding) region Alba PF01918.21 ORF50485 - 1.1e-15 57.2 0.1 1.5e-15 56.8 0.1 1.2 1 0 0 1 1 1 1 Alba DUF5522 PF17653.1 ORF4962 - 5.4 7.1 9.7 0.89 9.6 3.3 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5522) BPL_LplA_LipB PF03099.19 ORF48096 - 3.2e-13 49.7 0.0 4.5e-13 49.3 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family BPL_C PF02237.17 ORF48096 - 2.7e-12 46.4 0.1 5.4e-12 45.4 0.1 1.5 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain BPL_LplA_LipB_2 PF16917.5 ORF48096 - 0.006 16.1 0.1 0.0074 15.8 0.1 1.1 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family YdfA_immunity PF12127.8 ORF48096 - 0.024 13.7 0.1 0.033 13.3 0.1 1.1 1 0 0 1 1 1 0 SigmaW regulon antibacterial YcbB PF08664.10 ORF48046 - 0.084 12.9 0.1 0.31 11.1 0.0 1.9 2 0 0 2 2 2 0 YcbB domain MFS_MOT1 PF16983.5 ORF46159 - 0.089 13.2 1.6 0.13 12.6 1.2 1.6 1 1 0 1 1 1 0 Molybdate transporter of MFS superfamily zf-C3HC4 PF00097.25 ORF46159 - 3.2 7.7 7.2 29 4.7 0.1 2.8 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF46159 - 3.6 7.8 6.9 22 5.3 3.1 2.6 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING RRN3 PF05327.11 ORF45328 - 0.0018 16.9 0.6 0.0023 16.6 0.6 1.1 1 0 0 1 1 1 1 RNA polymerase I specific transcription initiation factor RRN3 APG6 PF04111.12 ORF45328 - 0.011 15.7 0.2 0.015 15.2 0.2 1.2 1 0 0 1 1 1 0 Apg6 BARA domain Phage_Gp23 PF10669.9 ORF45328 - 0.11 12.8 5.1 0.085 13.2 2.9 1.7 1 1 1 2 2 2 0 Protein gp23 (Bacteriophage A118) PTR PF12789.7 ORF45328 - 0.21 11.6 1.8 0.97 9.5 0.4 2.2 1 1 1 2 2 2 0 Phage tail repeat like SQS_PSY PF00494.19 ORF44161 - 0.012 15.1 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 0 Squalene/phytoene synthase Ogr_Delta PF04606.12 ORF44161 - 0.15 12.0 0.7 0.27 11.3 0.7 1.3 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger Tail_VII PF17091.5 ORF42802 - 0.094 12.6 0.2 0.22 11.4 0.2 1.5 1 0 0 1 1 1 0 Inovirus G7P protein zf-RING_2 PF13639.6 ORF41928 - 3.8e-09 36.7 9.7 1.4e-08 34.9 5.9 2.3 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 ORF41928 - 6.3e-08 32.4 3.9 1.4e-07 31.3 3.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF41928 - 1.2e-07 31.6 5.4 3.3e-07 30.1 5.4 1.8 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF41928 - 1.3e-05 25.1 5.0 4.2e-05 23.5 0.6 2.5 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF41928 - 0.00011 22.2 2.3 0.00011 22.2 2.3 2.1 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF41928 - 0.0002 21.1 6.1 0.00041 20.2 5.7 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF41928 - 0.0024 17.7 5.9 0.0024 17.7 5.9 2.5 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 ORF41928 - 0.0028 17.4 4.5 0.0028 17.4 4.5 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF41928 - 0.0043 16.9 7.7 0.058 13.3 7.8 2.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF41928 - 0.015 15.6 8.9 0.1 12.9 8.9 2.2 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf_CCCH_4 PF18345.1 ORF41928 - 0.02 14.9 3.8 0.02 14.9 3.8 2.3 2 0 0 2 2 2 0 Zinc finger domain Torus PF16131.5 ORF41928 - 0.04 14.6 0.1 0.081 13.6 0.1 1.5 1 0 0 1 1 1 0 Torus domain zf-RING_4 PF14570.6 ORF41928 - 0.059 13.2 5.9 0.19 11.6 5.9 1.8 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-CCCH PF00642.24 ORF41928 - 0.11 12.4 3.9 0.34 10.9 3.9 1.9 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-ANAPC11 PF12861.7 ORF41928 - 0.12 12.4 5.5 0.079 13.0 3.1 2.0 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF41928 - 0.45 10.7 8.5 0.26 11.5 4.3 2.3 2 0 0 2 2 2 0 FANCL C-terminal domain zf-CCCH_4 PF18044.1 ORF41928 - 7.6 6.5 11.9 0.25 11.2 4.8 2.3 2 0 0 2 2 2 0 CCCH-type zinc finger DUF4632 PF15451.6 ORF40177 - 0.58 10.3 7.1 1 9.5 7.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4632) EF-hand_1 PF00036.32 ORF36382 - 3.2e-08 32.6 2.4 0.27 10.9 0.0 4.3 5 0 0 5 5 5 3 EF hand EF-hand_6 PF13405.6 ORF36382 - 1.7e-05 24.4 0.1 14 5.9 0.0 4.1 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF36382 - 0.00011 22.5 2.9 0.15 12.6 0.5 3.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF36382 - 0.0033 17.3 1.0 0.032 14.2 0.1 2.2 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_8 PF13833.6 ORF36382 - 0.039 13.8 2.2 2.9 7.8 0.0 3.3 4 0 0 4 4 4 0 EF-hand domain pair RFX_DNA_binding PF02257.15 ORF36382 - 0.13 12.9 0.0 0.56 10.9 0.0 1.9 2 0 0 2 2 2 0 RFX DNA-binding domain adh_short PF00106.25 ORF34616 - 4.1e-19 68.8 0.0 5.3e-19 68.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF34616 - 3.8e-09 36.4 0.0 4.8e-09 36.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF34616 - 3.2e-07 30.5 0.0 4.3e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 ORF34616 - 0.00057 19.2 0.0 0.00095 18.5 0.0 1.3 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Shikimate_DH PF01488.20 ORF34616 - 0.0043 17.1 0.1 0.006 16.6 0.1 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase DUF43 PF01861.16 ORF34616 - 0.0095 15.2 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 1 Branched-chain polyamine synthase A C-terminal domain NAD_binding_7 PF13241.6 ORF34616 - 0.018 15.5 0.0 0.022 15.2 0.0 1.2 1 0 0 1 1 1 0 Putative NAD(P)-binding ApbA PF02558.16 ORF34616 - 0.019 14.6 0.0 0.028 14.1 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Ubie_methyltran PF01209.18 ORF34616 - 0.02 14.2 0.0 0.071 12.4 0.0 1.8 1 1 1 2 2 2 0 ubiE/COQ5 methyltransferase family Pyr_redox_3 PF13738.6 ORF34616 - 0.053 12.8 0.0 0.065 12.5 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.17 ORF34616 - 0.057 14.0 0.1 0.082 13.5 0.1 1.3 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_10 PF13460.6 ORF34616 - 0.097 12.6 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H-binding AlaDh_PNT_C PF01262.21 ORF34616 - 0.11 11.8 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain OAD_gamma PF04277.13 ORF34616 - 0.14 12.8 2.0 0.23 12.1 0.2 2.1 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain TrkA_N PF02254.18 ORF34616 - 0.14 12.4 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain Sacchrp_dh_NADP PF03435.18 ORF34616 - 0.19 12.0 0.0 0.26 11.5 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DnaJ_CXXCXGXG PF00684.19 ORF32343 - 3.8e-08 33.6 18.1 7.2e-08 32.7 18.1 1.5 1 0 0 1 1 1 1 DnaJ central domain DnaJ_C PF01556.18 ORF32343 - 4.6e-07 30.0 0.0 6.7e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain Anti-TRAP PF15777.5 ORF32343 - 0.00072 19.5 15.8 0.052 13.5 0.4 3.4 1 1 2 3 3 3 2 Tryptophan RNA-binding attenuator protein inhibitory protein TackOD1 PF18551.1 ORF32343 - 0.064 12.9 8.6 0.085 12.5 0.7 2.1 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 DUF1356 PF07092.12 ORF32343 - 6.6 5.9 9.6 0.56 9.4 1.2 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1356) MT PF12777.7 ORF29351 - 0.0011 18.0 0.1 0.0011 18.0 0.1 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Carbam_trans_N PF02543.15 ORF29351 - 0.026 14.2 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus LysR_substrate PF03466.20 ORF28941 - 6.5e-22 77.9 0.0 7.2e-22 77.8 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Fe-S_biosyn PF01521.20 ORF27469 - 0.088 13.0 0.0 0.41 10.8 0.0 2.0 1 1 1 2 2 2 0 Iron-sulphur cluster biosynthesis Amidohydro_1 PF01979.20 ORF2686 - 6.5e-08 32.3 0.0 8.5e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family DUF192 PF02643.15 ORF24315 - 0.13 12.5 7.2 0.28 11.4 0.2 3.0 1 1 2 3 3 3 0 Uncharacterized ACR, COG1430 HypD PF01924.16 ORF24058 - 8.5e-63 212.6 0.0 9.7e-63 212.4 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family Methyltransf_9 PF08003.11 ORF24058 - 0.16 10.9 0.0 0.2 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Aldolase PF01081.19 ORF19076 - 5.3e-09 35.8 0.0 6.3e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 KDPG and KHG aldolase Thioredoxin_13 PF18401.1 ORF19076 - 0.039 13.9 0.0 0.057 13.3 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain RRM_1 PF00076.22 ORF18681 - 3.3e-15 55.7 0.0 5.6e-15 54.9 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF18681 - 0.00047 20.2 0.0 0.00075 19.6 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif PMI_typeI PF01238.21 ORF18671 - 5.2e-34 118.0 0.0 6e-34 117.8 0.0 1.0 1 0 0 1 1 1 1 Phosphomannose isomerase type I Cupin_2 PF07883.11 ORF18671 - 2.6e-05 23.8 0.1 0.0082 15.8 0.2 2.5 2 1 0 2 2 2 2 Cupin domain AraC_binding PF02311.19 ORF18671 - 0.0035 17.3 0.0 0.034 14.0 0.0 2.1 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_3 PF05899.12 ORF18671 - 0.077 12.7 0.0 0.2 11.4 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Pro_isomerase PF00160.21 ORF17001 - 1.3e-49 168.5 0.0 1.7e-49 168.2 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HemeBinding_Shp PF11545.8 ORF16836 - 0.013 15.5 0.1 0.019 14.9 0.1 1.2 1 0 0 1 1 1 0 Cell surface heme-binding protein Shp Tub_N PF16322.5 ORF16836 - 0.091 13.2 11.0 0.12 12.7 11.0 1.1 1 0 0 1 1 1 0 Tubby N-terminal EF-hand_1 PF00036.32 ORF15853 - 0.00025 20.4 0.1 0.77 9.5 0.0 2.9 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF15853 - 0.0031 17.3 0.0 1.2 9.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF15853 - 0.012 16.0 0.0 0.21 12.1 0.0 2.5 2 2 0 2 2 2 0 EF-hand domain pair DUF2956 PF11169.8 ORF152320 - 0.52 10.5 1.5 1.2 9.4 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2956) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks128.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks128.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks128.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks128.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DnaJ_CXXCXGXG PF00684.19 ORF149839 - 3.8e-08 33.6 18.1 7.2e-08 32.7 18.1 1.5 1 0 0 1 1 1 1 DnaJ central domain DnaJ_C PF01556.18 ORF149839 - 4.6e-07 30.0 0.0 6.7e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain Anti-TRAP PF15777.5 ORF149839 - 0.00072 19.5 15.8 0.052 13.5 0.4 3.4 1 1 2 3 3 3 2 Tryptophan RNA-binding attenuator protein inhibitory protein TackOD1 PF18551.1 ORF149839 - 0.064 12.9 8.6 0.085 12.5 0.7 2.1 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 DUF1356 PF07092.12 ORF149839 - 6.6 5.9 9.6 0.56 9.4 1.2 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1356) DUF4820 PF16091.5 ORF148293 - 0.15 11.4 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Pam16 PF03656.13 ORF147121 - 7.8e-08 32.4 0.5 1.5e-07 31.5 0.5 1.4 1 1 0 1 1 1 1 Pam16 Zip PF02535.22 ORF146332 - 7e-11 41.9 10.6 8.3e-11 41.7 10.6 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter PH PF00169.29 ORF145817 - 0.0035 17.8 0.0 0.0066 16.9 0.0 1.4 1 1 0 1 1 1 1 PH domain DUF4388 PF14332.6 ORF145817 - 0.064 13.5 0.0 0.14 12.4 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4388) Mcp5_PH PF12814.7 ORF145817 - 0.11 12.7 0.0 0.55 10.4 0.0 2.0 1 1 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology Exo_endo_phos PF03372.23 ORF144988 - 0.074 12.5 0.0 0.088 12.3 0.0 1.0 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Methyltransf_1N PF02870.15 ORF144520 - 0.11 13.3 0.0 0.21 12.4 0.0 1.5 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GP88 PF17338.2 ORF143631 - 0.25 10.8 1.6 0.36 10.3 1.6 1.2 1 0 0 1 1 1 0 Gene product 88 ApbE PF02424.15 ORF14297 - 0.042 13.4 0.1 0.14 11.6 0.1 1.8 1 1 0 1 1 1 0 ApbE family Microtub_bd PF16796.5 ORF14297 - 0.046 13.7 0.2 0.1 12.5 0.2 1.7 1 1 0 1 1 1 0 Microtubule binding IL2 PF00715.17 ORF14297 - 0.065 13.2 0.1 0.1 12.6 0.1 1.4 1 0 0 1 1 1 0 Interleukin 2 eIF-1a PF01176.19 ORF139998 - 2.2e-18 65.8 0.0 5.1e-18 64.6 0.0 1.7 1 1 0 1 1 1 1 Translation initiation factor 1A / IF-1 RsgA_N PF16745.5 ORF139998 - 0.0022 17.7 0.0 0.0038 16.9 0.0 1.5 1 0 0 1 1 1 1 RsgA N-terminal domain EF-hand_7 PF13499.6 ORF138544 - 2e-18 66.6 9.8 1.7e-10 41.2 1.0 2.2 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF138544 - 5.2e-13 47.5 2.5 1.7e-05 24.0 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF138544 - 3.1e-11 42.2 1.7 9e-05 22.1 0.6 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF138544 - 4.9e-07 29.5 4.5 0.00011 22.0 0.0 2.6 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF138544 - 1.3e-05 24.5 2.1 0.063 12.8 1.6 2.5 2 0 0 2 2 2 2 EF hand EF-hand_10 PF14788.6 ORF138544 - 0.0033 17.2 0.9 0.032 14.1 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF138544 - 0.0096 15.9 2.5 0.11 12.5 0.1 2.3 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand DSPc PF00782.20 ORF138225 - 0.00022 21.0 0.2 0.00054 19.8 0.0 1.8 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain PRP8_domainIV PF12134.8 ORF138225 - 0.045 13.4 0.0 0.071 12.7 0.0 1.3 1 0 0 1 1 1 0 PRP8 domain IV core Autotransporter PF03797.19 ORF137154 - 7.3e-27 94.6 6.5 8.9e-27 94.3 6.5 1.1 1 0 0 1 1 1 1 Autotransporter beta-domain OMP_b-brl PF13505.6 ORF137154 - 1.3e-05 25.4 14.1 2e-05 24.8 14.1 1.3 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain Ribosomal_S11 PF00411.19 ORF136939 - 4.5e-54 181.5 0.8 6.8e-54 181.0 0.8 1.3 1 0 0 1 1 1 1 Ribosomal protein S11 Homeobox_KN PF05920.11 ORF133582 - 2.8e-12 46.3 0.8 4.9e-12 45.6 0.8 1.4 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF133582 - 2.9e-06 27.0 0.4 7.1e-06 25.8 0.4 1.7 1 0 0 1 1 1 1 Homeodomain SQS_PSY PF00494.19 ORF132786 - 0.012 15.1 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 0 Squalene/phytoene synthase FSAP_sig_propep PF03032.15 ORF132786 - 0.091 12.8 0.1 0.091 12.8 0.1 1.9 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide Ogr_Delta PF04606.12 ORF132786 - 0.16 12.0 0.7 0.27 11.3 0.7 1.3 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger GSG-1 PF07803.11 ORF132272 - 0.099 12.6 0.0 2.2 8.2 0.0 2.3 2 1 1 3 3 3 0 GSG1-like protein ACPS PF01648.20 ORF132272 - 0.18 11.9 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 4'-phosphopantetheinyl transferase superfamily Dynamitin PF04912.14 ORF129377 - 0.00077 18.9 3.4 0.001 18.5 3.4 1.2 1 0 0 1 1 1 1 Dynamitin GutM PF06923.11 ORF129377 - 0.085 13.0 0.6 0.51 10.5 0.1 2.2 3 0 0 3 3 3 0 Glucitol operon activator protein (GutM) DUF2203 PF09969.9 ORF129377 - 0.38 11.5 5.4 1.8 9.3 0.5 2.6 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Grg1 PF11034.8 ORF129377 - 0.79 10.0 6.4 0.22 11.7 0.5 2.5 1 1 1 2 2 2 0 Glucose-repressible protein Grg1 LMBR1 PF04791.16 ORF129377 - 2.1 7.2 5.0 2.1 7.1 5.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Sec62 PF03839.16 ORF128040 - 0.16 11.4 3.3 0.23 11.0 3.3 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 Jun PF03957.13 ORF127205 - 0.06 13.2 0.0 0.081 12.8 0.0 1.2 1 0 0 1 1 1 0 Jun-like transcription factor HemeBinding_Shp PF11545.8 ORF123207 - 0.013 15.5 0.1 0.019 14.9 0.1 1.2 1 0 0 1 1 1 0 Cell surface heme-binding protein Shp Tub_N PF16322.5 ORF123207 - 0.091 13.2 11.0 0.12 12.7 11.0 1.1 1 0 0 1 1 1 0 Tubby N-terminal Sec62 PF03839.16 ORF116829 - 0.16 11.4 3.3 0.23 11.0 3.3 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 ThrE_2 PF12821.7 ORF116644 - 0.13 12.4 11.2 0.08 13.1 8.4 1.8 1 1 1 2 2 2 0 Threonine/Serine exporter, ThrE Peptidase_M1 PF01433.20 ORF116332 - 0.035 13.7 0.5 0.041 13.4 0.5 1.1 1 0 0 1 1 1 0 Peptidase family M1 domain B2 PF11473.8 ORF116332 - 0.053 13.3 0.5 0.27 11.0 0.1 2.2 2 0 0 2 2 2 0 RNA binding protein B2 DUF2956 PF11169.8 ORF115208 - 0.52 10.5 1.5 1.2 9.4 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2956) HupF_HypC PF01455.18 ORF115111 - 0.095 12.9 0.3 0.23 11.7 0.3 1.6 1 0 0 1 1 1 0 HupF/HypC family GP4 PF03010.14 ORF114208 - 0.11 12.4 1.9 0.17 11.8 1.9 1.3 1 0 0 1 1 1 0 GP4 zf-RING_2 PF13639.6 ORF11090 - 7.7 6.9 13.9 1.3 9.4 1.5 3.3 4 0 0 4 4 4 0 Ring finger domain NIR_SIR_ferr PF03460.17 ORF11002 - 0.053 13.4 0.0 0.093 12.6 0.0 1.4 1 0 0 1 1 1 0 Nitrite/Sulfite reductase ferredoxin-like half domain GD_AH_C PF04295.13 ORF10736 - 4.2e-72 243.1 0.0 4.6e-72 243.0 0.0 1.0 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus TPR_16 PF13432.6 ORF106308 - 9.6e-05 22.9 2.4 0.043 14.5 0.2 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF106308 - 0.0032 17.9 0.5 0.015 15.8 0.1 2.4 2 2 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF106308 - 0.0076 16.3 0.3 0.32 11.2 0.1 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF106308 - 0.038 14.6 1.2 0.17 12.6 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF106308 - 0.043 14.6 1.5 3 8.9 0.1 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF106308 - 0.14 12.5 2.8 0.55 10.6 0.2 2.4 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF106308 - 0.14 12.0 0.0 0.54 10.2 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat NA37 PF04245.13 ORF106308 - 0.15 11.5 0.0 13 5.1 0.0 2.1 1 1 1 2 2 2 0 37-kD nucleoid-associated bacterial protein TPR_4 PF07721.14 ORF106308 - 2 9.3 5.4 0.73 10.6 0.8 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF116 PF01976.17 ORF105493 - 0.014 14.9 0.3 0.029 13.9 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF116 Rubredoxin PF00301.20 ORF105493 - 0.041 13.9 0.0 0.041 13.9 0.0 2.4 2 1 0 3 3 3 0 Rubredoxin S4 PF01479.25 ORF104337 - 5.2e-10 38.9 0.7 5.2e-10 38.9 0.7 2.0 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.19 ORF104337 - 5.5e-06 27.2 0.8 8.9e-06 26.5 0.6 1.5 1 1 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain Involucrin_N PF10583.9 ORF103030 - 5.7 7.6 6.1 2.6 8.7 0.6 2.9 3 1 1 4 4 4 0 Involucrin of squamous epithelia N-terminus KfrA_N PF11740.8 ORF103030 - 7.8 7.2 11.2 3 8.5 2.3 3.0 1 1 2 3 3 3 0 Plasmid replication region DNA-binding N-term PCSK9_C1 PF18459.1 ORF103030 - 9.7 6.4 17.5 10 6.3 0.2 4.1 4 0 0 4 4 4 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Exo_endo_phos PF03372.23 ORF103005 - 0.01 15.4 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family HemeBinding_Shp PF11545.8 ORF101973 - 0.013 15.5 0.1 0.019 14.9 0.1 1.2 1 0 0 1 1 1 0 Cell surface heme-binding protein Shp Tub_N PF16322.5 ORF101973 - 0.091 13.2 11.0 0.12 12.7 11.0 1.1 1 0 0 1 1 1 0 Tubby N-terminal Methyltransf_1N PF02870.15 ORF100588 - 0.11 13.3 0.0 0.21 12.4 0.0 1.5 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MAP70 PF07058.11 NODE_38121_length_556_cov_84.721689_g30823_i0reverse_frame_1 - 6 5.5 9.7 1.3 7.7 6.2 1.5 1 1 1 2 2 2 0 Microtubule-associated protein 70 Ribosomal_S17_N PF16205.5 NODE_38113_length_556_cov_99.625720_g30815_i0forward_frame_1 - 2.5e-29 101.5 0.6 4.6e-29 100.6 0.6 1.5 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal Ribosomal_S17 PF00366.20 NODE_38113_length_556_cov_99.625720_g30815_i0forward_frame_1 - 1.4e-21 76.4 0.1 2.8e-21 75.4 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein S17 SMI1_KNR4 PF09346.10 NODE_38108_length_556_cov_110.042226_g30811_i0reverse_frame_1 - 0.026 14.9 0.0 0.036 14.5 0.0 1.2 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) Spc7 PF08317.11 NODE_38107_length_556_cov_111.656430_g30810_i0reverse_frame_1 - 0.0024 16.8 12.2 0.0028 16.6 12.2 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein TrbI_Ftype PF09677.10 NODE_38107_length_556_cov_111.656430_g30810_i0reverse_frame_1 - 0.03 14.6 0.5 0.03 14.6 0.5 2.0 1 1 1 2 2 2 0 Type-F conjugative transfer system protein (TrbI_Ftype) Spectrin_like PF18373.1 NODE_38107_length_556_cov_111.656430_g30810_i0reverse_frame_1 - 0.46 10.6 7.8 2.1 8.5 0.6 3.3 1 1 2 3 3 3 0 Spectrin like domain Plk4_PB2 PF18409.1 NODE_38107_length_556_cov_111.656430_g30810_i0reverse_frame_1 - 1.1 9.9 4.8 2.7 8.7 3.3 2.1 1 1 1 2 2 2 0 Polo-like Kinase 4 Polo Box 2 DUF4050 PF13259.6 NODE_38103_length_556_cov_133.466411_g30807_i0forward_frame_1 - 0.26 11.6 4.0 0.33 11.3 4.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4050) SpoIISA_toxin PF14171.6 NODE_38088_length_556_cov_252.796545_g30792_i0reverse_frame_1 - 0.006 16.3 1.5 0.0071 16.1 1.5 1.2 1 0 0 1 1 1 1 Toxin SpoIISA, type II toxin-antitoxin system PTB PF08416.13 NODE_38088_length_556_cov_252.796545_g30792_i0reverse_frame_1 - 0.03 14.5 3.3 0.049 13.8 3.3 1.3 1 0 0 1 1 1 0 Phosphotyrosine-binding domain Rx_N PF18052.1 NODE_38088_length_556_cov_252.796545_g30792_i0reverse_frame_1 - 0.042 14.1 0.2 0.065 13.5 0.2 1.4 1 0 0 1 1 1 0 Rx N-terminal domain SRCR_2 PF15494.6 NODE_38088_length_556_cov_252.796545_g30792_i0reverse_frame_1 - 0.091 13.3 0.1 0.18 12.3 0.1 1.7 1 1 0 1 1 1 0 Scavenger receptor cysteine-rich domain ComS PF17584.2 NODE_38082_length_556_cov_7796.105566_g30786_i0reverse_frame_1 - 0.11 12.1 0.5 0.27 10.8 0.5 1.7 1 0 0 1 1 1 0 Bacillus competence protein S CorA PF01544.18 NODE_38078_length_557_cov_1.948276_g30783_i0forward_frame_1 - 3.5e-12 46.3 2.5 5.7e-12 45.5 2.5 1.3 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein FxsA PF04186.13 NODE_38075_length_557_cov_2.408046_g30780_i0reverse_frame_1 - 0.035 14.2 0.1 0.091 12.9 0.0 1.8 2 0 0 2 2 2 0 FxsA cytoplasmic membrane protein IGFL PF14653.6 NODE_38073_length_557_cov_3.109195_g30778_i0reverse_frame_1 - 0.14 12.1 0.6 0.3 11.1 0.6 1.5 1 0 0 1 1 1 0 Insulin growth factor-like family RPM2 PF08579.11 NODE_38070_length_557_cov_8.804598_g30775_i0reverse_frame_1 - 0.021 15.2 0.7 0.036 14.5 0.7 1.3 1 0 0 1 1 1 0 Mitochondrial ribonuclease P subunit (RPM2) zf-C2H2_7 PF15269.6 NODE_38070_length_557_cov_8.804598_g30775_i0reverse_frame_1 - 3.8 7.7 9.6 1.6 8.9 0.9 2.5 2 0 0 2 2 2 0 Zinc-finger GPS PF01825.21 NODE_38070_length_557_cov_8.804598_g30775_i0forward_frame_1 - 0.16 12.5 0.9 0.29 11.7 0.9 1.4 1 0 0 1 1 1 0 GPCR proteolysis site, GPS, motif DIRP PF06584.13 NODE_38066_length_557_cov_63.973180_g30771_i0reverse_frame_1 - 1.2e-05 25.5 0.7 2.3e-05 24.5 0.1 1.8 2 0 0 2 2 2 1 DIRP NinE PF05322.11 NODE_38060_length_557_cov_83.779693_g30765_i0reverse_frame_1 - 0.011 15.7 0.1 0.028 14.3 0.1 1.7 1 0 0 1 1 1 0 NINE Protein BCOR PF15808.5 NODE_38057_length_557_cov_84.507663_g30762_i0reverse_frame_1 - 0.0043 17.3 0.4 0.0069 16.6 0.1 1.4 2 0 0 2 2 2 1 BCL-6 co-repressor, non-ankyrin-repeat region Thioredoxin_3 PF13192.6 NODE_38057_length_557_cov_84.507663_g30762_i0reverse_frame_1 - 9.6 6.3 6.3 3.7 7.7 0.3 2.4 1 1 1 2 2 2 0 Thioredoxin domain DUF1758 PF05585.12 NODE_38052_length_557_cov_94.593870_g30757_i0reverse_frame_1 - 0.093 12.5 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Putative peptidase (DUF1758) Lipase_3 PF01764.25 NODE_38037_length_557_cov_197.509579_g30742_i0forward_frame_1 - 0.012 15.5 0.1 0.02 14.8 0.1 1.3 1 0 0 1 1 1 0 Lipase (class 3) DUF3327 PF11806.8 NODE_38018_length_558_cov_2.177820_g30726_i0forward_frame_1 - 5.1e-44 149.9 2.2 5.1e-44 149.9 2.2 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF3327) WD40 PF00400.32 NODE_38014_length_558_cov_3.068834_g30722_i0forward_frame_1 - 2.5e-11 43.9 0.3 3.1e-06 27.8 0.2 2.7 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_38014_length_558_cov_3.068834_g30722_i0forward_frame_1 - 0.0025 18.1 0.0 0.87 9.9 0.0 2.5 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain DUF2207 PF09972.9 NODE_38006_length_558_cov_4.065010_g30714_i0forward_frame_1 - 0.25 10.0 4.0 0.27 9.9 4.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Glutaredoxin PF00462.24 NODE_37992_length_558_cov_94.803059_g30700_i0forward_frame_1 - 9.5e-12 45.0 0.0 3.2e-11 43.3 0.0 1.8 2 0 0 2 2 2 1 Glutaredoxin DUF836 PF05768.14 NODE_37992_length_558_cov_94.803059_g30700_i0forward_frame_1 - 0.0044 17.4 0.0 0.0071 16.7 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) TraF PF13728.6 NODE_37992_length_558_cov_94.803059_g30700_i0forward_frame_1 - 0.044 13.6 0.4 0.08 12.7 0.4 1.5 1 1 0 1 1 1 0 F plasmid transfer operon protein Ank_2 PF12796.7 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_1 - 0.0093 16.5 0.0 0.013 16.0 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_1 - 0.017 15.6 0.0 0.039 14.5 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeat Ank PF00023.30 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_1 - 0.032 14.7 0.0 0.063 13.7 0.0 1.5 1 0 0 1 1 1 0 Ankyrin repeat SPX PF03105.19 NODE_37960_length_559_cov_14.765267_g30672_i0forward_frame_2 - 5.1 6.9 8.3 6 6.7 8.3 1.2 1 0 0 1 1 1 0 SPX domain LysR_substrate PF03466.20 NODE_37920_length_560_cov_2.200000_g30634_i0reverse_frame_2 - 0.00022 20.7 0.1 0.00028 20.3 0.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain G2BR PF18442.1 NODE_37920_length_560_cov_2.200000_g30634_i0reverse_frame_2 - 0.12 12.0 0.2 0.2 11.3 0.2 1.3 1 0 0 1 1 1 0 E3 gp78 Ube2g2-binding region (G2BR) FlxA PF14282.6 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 7.2e-15 54.8 28.1 1.1e-14 54.2 28.1 1.2 1 0 0 1 1 1 1 FlxA-like protein Nse5 PF08691.10 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 0.00023 20.0 1.0 0.00028 19.7 1.0 1.0 1 0 0 1 1 1 1 DNA repair proteins Nse5 and Nse6 DHR10 PF18595.1 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 0.0017 18.4 11.5 0.0024 17.9 11.5 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain Med21 PF11221.8 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 0.0042 17.3 11.0 0.0058 16.9 11.0 1.2 1 0 0 1 1 1 1 Subunit 21 of Mediator complex AAA_13 PF13166.6 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 0.027 13.1 4.3 0.034 12.8 4.3 1.1 1 0 0 1 1 1 0 AAA domain Allexi_40kDa PF05549.11 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 0.092 12.2 3.3 0.12 11.8 3.3 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein FapA PF03961.13 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 0.098 11.2 5.0 0.12 11.0 5.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Med10 PF09748.9 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 0.098 12.6 4.1 0.14 12.1 4.1 1.2 1 0 0 1 1 1 0 Transcription factor subunit Med10 of Mediator complex PCRF PF03462.18 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 0.13 12.2 3.6 0.17 11.8 3.6 1.2 1 0 0 1 1 1 0 PCRF domain Med9 PF07544.13 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 0.86 9.7 10.8 0.49 10.5 8.8 1.6 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 MscS_porin PF12795.7 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 1 8.9 24.5 1.5 8.3 16.1 2.1 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain FAM76 PF16046.5 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 1.1 8.6 7.1 1.4 8.2 7.1 1.1 1 0 0 1 1 1 0 FAM76 protein Phage_GPO PF05929.11 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 1.3 8.6 7.5 1.6 8.3 7.5 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase LMBR1 PF04791.16 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 1.6 7.6 4.8 1.8 7.4 4.8 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein FemAB PF02388.16 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 2 7.2 5.9 2.6 6.8 5.9 1.1 1 0 0 1 1 1 0 FemAB family SlyX PF04102.12 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 4.2 8.1 14.6 5.7 7.6 1.1 2.2 1 1 1 2 2 2 0 SlyX MbeD_MobD PF04899.12 NODE_37920_length_560_cov_2.200000_g30634_i0forward_frame_3 - 9.2 6.5 13.2 4.5 7.5 0.4 2.3 1 1 1 2 2 2 0 MbeD/MobD like Gemini_AL2 PF01440.16 NODE_37917_length_560_cov_2.415238_g30631_i0forward_frame_2 - 0.056 13.9 1.9 0.095 13.1 1.9 1.4 1 0 0 1 1 1 0 Geminivirus AL2 protein UPAR_LY6 PF00021.21 NODE_37917_length_560_cov_2.415238_g30631_i0forward_frame_2 - 0.6 10.8 9.1 0.37 11.5 5.2 2.2 2 0 0 2 2 2 0 u-PAR/Ly-6 domain zinc_ribbon_15 PF17032.5 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_3 - 0.0067 17.2 3.3 0.012 16.3 3.3 1.4 1 0 0 1 1 1 1 zinc-ribbon family zf-RING_UBOX PF13445.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 8e-09 35.4 6.5 8e-09 35.4 6.5 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 3.2e-07 30.1 9.7 3.2e-07 30.1 9.7 2.1 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 1.2e-06 28.4 7.8 1.2e-06 28.4 7.8 2.2 2 1 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 1.9e-06 27.9 10.4 6.5e-06 26.2 10.4 1.9 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 1.5e-05 24.7 10.7 1.5e-05 24.7 10.7 2.3 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 0.00035 20.8 9.8 0.00035 20.8 9.8 2.6 3 0 0 3 3 3 1 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 0.0012 18.6 9.6 0.0012 18.6 9.6 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 0.0019 18.1 5.1 0.0019 18.1 5.1 1.9 2 0 0 2 2 2 1 zf-RING of BARD1-type protein zf-Nse PF11789.8 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 0.0066 16.2 1.5 0.014 15.2 1.5 1.6 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_11 PF17123.5 NODE_37915_length_560_cov_3.201905_g30629_i0reverse_frame_2 - 0.3 10.9 9.3 0.97 9.2 9.3 2.0 1 0 0 1 1 1 0 RING-like zinc finger MRP-63 PF14978.6 NODE_37913_length_560_cov_3.617143_g30627_i0forward_frame_3 - 0.022 15.4 1.2 0.2 12.3 0.4 2.3 2 1 0 2 2 2 0 Mitochondrial ribosome protein 63 UreF PF01730.16 NODE_37911_length_560_cov_6.885714_g30625_i0forward_frame_2 - 0.051 14.2 0.2 0.086 13.4 0.2 1.4 1 0 0 1 1 1 0 UreF Kri1 PF05178.12 NODE_37909_length_560_cov_68.133333_g30623_i0reverse_frame_3 - 0.38 11.4 1.8 1.4 9.6 0.3 2.1 2 0 0 2 2 2 0 KRI1-like family ARS2 PF04959.13 NODE_37887_length_560_cov_245.133333_g20992_i2forward_frame_2 - 0.027 14.8 0.0 0.044 14.1 0.0 1.3 1 0 0 1 1 1 0 Arsenite-resistance protein 2 zf-C2H2 PF00096.26 NODE_37887_length_560_cov_245.133333_g20992_i2forward_frame_2 - 0.048 14.1 0.2 0.16 12.5 0.2 2.0 1 0 0 1 1 1 0 Zinc finger, C2H2 type DUF4880 PF16220.5 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_3 - 0.07 13.0 13.3 21 5.1 0.0 6.5 7 0 0 7 7 7 0 Domain of unknown function (DUF4880) MukB_hinge PF16330.5 NODE_37880_length_560_cov_770.554286_g30598_i0reverse_frame_2 - 0.43 10.3 1.6 1e+02 2.6 0.0 4.1 2 1 5 7 7 7 0 MukB hinge domain RTTN_N PF14726.6 NODE_37880_length_560_cov_770.554286_g30598_i0forward_frame_3 - 0.00057 20.6 1.9 0.35 11.7 0.1 3.0 1 1 2 3 3 3 3 Rotatin, an armadillo repeat protein, centriole functioning DUF2785 PF10978.8 NODE_37880_length_560_cov_770.554286_g30598_i0forward_frame_3 - 0.0032 17.3 3.0 0.32 10.8 0.4 2.8 1 1 3 4 4 4 3 Protein of unknown function (DUF2785) Cyt-b5 PF00173.28 NODE_37876_length_560_cov_2331.632381_g30595_i0forward_frame_3 - 1.1e-21 76.7 0.0 1.5e-21 76.3 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain zf-B_box PF00643.24 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 1e-05 25.6 4.4 1e-05 25.6 4.4 3.9 4 0 0 4 4 4 1 B-box zinc finger zf-C3HC4 PF00097.25 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 1.3e-05 24.9 8.8 1.3e-05 24.9 8.8 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 0.00017 21.8 4.3 0.00062 20.0 4.3 1.9 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 0.00021 21.2 10.8 0.00021 21.2 10.8 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_2 PF13639.6 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 0.0008 19.7 8.3 0.0008 19.7 8.3 2.6 2 2 0 2 2 2 1 Ring finger domain zf-C3HC4_4 PF15227.6 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 0.00082 19.5 2.7 0.00082 19.5 2.7 3.2 3 0 0 3 3 3 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 0.0015 18.5 8.1 0.0015 18.5 8.1 3.0 3 0 0 3 3 3 1 RING-type zinc-finger zf-RING_4 PF14570.6 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 0.045 13.5 18.4 0.1 12.4 6.0 2.9 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain zf-C3HC4_2 PF13923.6 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 0.089 12.7 15.5 0.14 12.0 11.5 3.1 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Sgf11 PF08209.11 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 0.25 10.9 0.1 0.25 10.9 0.1 2.8 3 0 0 3 3 2 0 Sgf11 (transcriptional regulation protein) zf-UDP PF14569.6 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 1.6 8.9 8.0 1.9 8.7 0.6 2.5 1 1 1 2 2 2 0 Zinc-binding RING-finger zf-C3HC4_5 PF17121.5 NODE_37871_length_561_cov_2.302281_g30591_i0forward_frame_2 - 1.8 8.5 16.4 0.084 12.8 10.2 2.1 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Glyco_transf_8 PF01501.20 NODE_37870_length_561_cov_2.500000_g30590_i0forward_frame_2 - 1.5e-47 162.4 1.8 1.6e-47 162.2 1.8 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 8 Glyco_transf_24 PF18404.1 NODE_37870_length_561_cov_2.500000_g30590_i0forward_frame_2 - 0.0013 18.2 0.7 0.0017 17.9 0.7 1.4 1 1 0 1 1 1 1 Glucosyltransferase 24 GcrA PF07750.11 NODE_37864_length_561_cov_3.385932_g30584_i0forward_frame_2 - 2.9 8.3 6.0 0.77 10.2 2.6 1.7 2 0 0 2 2 2 0 GcrA cell cycle regulator FLILHELTA PF10306.9 NODE_37861_length_561_cov_5.406844_g30581_i0reverse_frame_3 - 0.21 12.0 2.2 0.26 11.7 1.1 1.8 2 0 0 2 2 2 0 Hypothetical protein FLILHELTA Peptidase_S74 PF13884.6 NODE_37861_length_561_cov_5.406844_g30581_i0forward_frame_3 - 4e-06 27.1 0.6 7.1e-06 26.3 0.6 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase DAGK_acc PF00609.19 NODE_37860_length_561_cov_6.370722_g30580_i0reverse_frame_2 - 0.17 12.2 3.9 0.38 11.1 3.9 1.6 1 0 0 1 1 1 0 Diacylglycerol kinase accessory domain Sec16 PF12932.7 NODE_37857_length_561_cov_60.794677_g30577_i0forward_frame_3 - 0.059 14.0 0.1 0.17 12.5 0.1 1.8 1 1 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region ANAPC4_WD40 PF12894.7 NODE_37857_length_561_cov_60.794677_g30577_i0forward_frame_3 - 0.07 13.4 0.0 0.33 11.3 0.0 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Capsid_NCLDV PF04451.12 NODE_37850_length_561_cov_86.294677_g30570_i0reverse_frame_3 - 0.0032 17.3 2.1 0.0084 15.9 0.0 2.0 2 0 0 2 2 2 1 Large eukaryotic DNA virus major capsid protein DUF3099 PF11298.8 NODE_37850_length_561_cov_86.294677_g30570_i0reverse_frame_3 - 0.12 12.5 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) Nop14 PF04147.12 NODE_37827_length_561_cov_233.633080_g30548_i0reverse_frame_2 - 0.97 7.6 22.8 1 7.5 22.8 1.1 1 0 0 1 1 1 0 Nop14-like family Zip PF02535.22 NODE_37827_length_561_cov_233.633080_g30548_i0reverse_frame_2 - 2.7 7.1 8.6 3.7 6.7 8.6 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter TMEM214 PF10151.9 NODE_37827_length_561_cov_233.633080_g30548_i0reverse_frame_2 - 7 5.0 6.9 9.1 4.6 6.9 1.2 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator DUF5090 PF17009.5 NODE_37827_length_561_cov_233.633080_g30548_i0forward_frame_3 - 8.6 6.3 12.1 12 5.8 12.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) START PF01852.19 ORF98762 - 0.028 13.8 0.0 0.042 13.2 0.0 1.2 1 0 0 1 1 1 0 START domain CDC45 PF02724.14 ORF97615 - 10 4.3 7.8 12 4.0 7.8 1.1 1 0 0 1 1 1 0 CDC45-like protein OppC_N PF12911.7 ORF97164 - 0.058 13.4 0.1 0.1 12.6 0.1 1.4 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C zf-C3HC4_3 PF13920.6 ORF97045 - 1.7e-12 47.0 7.7 1.7e-12 47.0 7.7 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF97045 - 0.00013 21.7 8.2 0.00013 21.7 8.2 1.9 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF97045 - 0.00021 21.2 7.9 0.00021 21.2 7.9 2.7 3 0 0 3 3 3 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF97045 - 0.00025 20.8 8.5 0.00025 20.8 8.5 2.7 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C2H2 PF00096.26 ORF97045 - 0.0024 18.2 2.6 0.0024 18.2 2.6 3.5 4 1 0 4 4 3 1 Zinc finger, C2H2 type zf-RING_UBOX PF13445.6 ORF97045 - 0.0032 17.5 1.8 0.0032 17.5 1.8 2.1 2 1 0 2 2 1 1 RING-type zinc-finger CxC7 PF18866.1 ORF97045 - 0.014 15.5 3.9 0.72 10.0 2.8 2.5 2 0 0 2 2 2 0 CxC7 like cysteine cluster associated with KDZ transposases zf-RING_11 PF17123.5 ORF97045 - 0.022 14.5 1.9 0.022 14.5 1.9 3.4 4 0 0 4 4 4 0 RING-like zinc finger zf-RING_2 PF13639.6 ORF97045 - 0.13 12.6 20.4 0.16 12.3 16.6 2.8 2 1 1 3 3 3 0 Ring finger domain zf-C3HC4_4 PF15227.6 ORF97045 - 0.41 10.9 10.5 5.4 7.2 10.5 2.4 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-met PF12874.7 ORF97045 - 1 9.8 0.1 1 9.8 0.1 4.3 5 0 0 5 5 5 0 Zinc-finger of C2H2 type FYVE_2 PF02318.16 ORF96152 - 0.001 19.3 1.8 0.001 19.3 1.8 1.7 1 1 1 2 2 2 1 FYVE-type zinc finger DUF2318 PF10080.9 ORF96152 - 0.014 15.5 6.2 1 9.5 0.8 2.4 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) zinc_ribbon_9 PF14369.6 ORF96152 - 0.016 15.4 4.1 4.1 7.7 2.9 3.4 2 1 0 2 2 2 0 zinc-ribbon zinc-ribbon_6 PF10005.9 ORF96152 - 0.023 15.4 3.3 0.044 14.5 3.3 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Ribosomal_S27e PF01667.17 ORF96152 - 0.025 14.3 8.1 0.054 13.2 1.3 2.4 1 1 2 3 3 3 0 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 ORF96152 - 0.04 13.4 8.5 0.091 12.3 2.0 2.8 2 0 0 2 2 2 0 TFIIB zinc-binding DZR PF12773.7 ORF96152 - 0.043 13.8 6.0 1.2 9.2 3.2 2.5 1 1 1 2 2 2 0 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF96152 - 0.31 10.5 8.9 4.4 6.8 0.3 3.7 4 0 0 4 4 4 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 ORF96152 - 0.43 10.5 12.8 0.34 10.9 1.5 3.8 2 1 1 3 3 3 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 ORF96152 - 0.47 10.2 0.2 0.47 10.2 0.2 3.0 3 1 0 3 3 3 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 ORF96152 - 0.56 10.0 11.7 1 9.1 1.4 2.5 2 0 0 2 2 2 0 A2L zinc ribbon domain DNA_RNApol_7kD PF03604.13 ORF96152 - 0.6 9.8 6.9 0.83 9.4 0.4 2.7 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Elf1 PF05129.13 ORF96152 - 0.8 9.8 9.1 5.9 7.0 0.7 3.1 1 1 2 3 3 3 0 Transcription elongation factor Elf1 like zf-C2HC5 PF06221.13 ORF96152 - 1.1 9.3 7.4 1.2 9.1 2.2 2.4 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type DUF951 PF06107.11 ORF96152 - 2 8.4 6.0 2.3 8.2 0.0 3.1 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF951) Lar_restr_allev PF14354.6 ORF96152 - 2 8.9 8.0 13 6.2 2.5 3.6 1 1 1 2 2 2 0 Restriction alleviation protein Lar NOB1_Zn_bind PF08772.11 ORF96152 - 3.2 8.0 8.5 6.7 6.9 5.3 2.4 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-LSD1 PF06943.12 ORF96152 - 4.3 7.3 5.4 4.8 7.1 0.2 2.6 2 1 0 2 2 2 0 LSD1 zinc finger Zn-ribbon_8 PF09723.10 ORF96152 - 5.8 7.1 7.4 5.7 7.2 0.1 3.1 1 1 2 4 4 4 0 Zinc ribbon domain IBR PF01485.21 ORF96152 - 6.1 7.2 12.5 10 6.4 5.4 3.0 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain PITH PF06201.13 ORF94797 - 9.1e-29 100.6 0.1 1.1e-28 100.4 0.1 1.1 1 0 0 1 1 1 1 PITH domain Pyr_redox_2 PF07992.14 ORF94191 - 5.8e-06 25.8 0.0 3.5e-05 23.2 0.0 2.1 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF94191 - 0.038 14.5 0.0 0.079 13.5 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase PipA PF07108.11 ORF94191 - 0.056 13.0 0.1 0.062 12.8 0.1 1.2 1 0 0 1 1 1 0 PipA protein SVIP PF15811.5 ORF88135 - 0.027 14.9 1.8 0.046 14.2 1.8 1.4 1 0 0 1 1 1 0 Small VCP/p97-interacting protein Ras PF00071.22 ORF87900 - 7.8e-51 171.9 0.1 9.1e-51 171.7 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF87900 - 2.4e-27 95.5 0.0 3.9e-27 94.8 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF87900 - 8.4e-08 31.9 0.0 9.6e-08 31.7 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF87900 - 0.0044 17.1 0.0 0.0071 16.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF87900 - 0.006 16.5 0.0 0.31 10.9 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase DUF4239 PF14023.6 ORF85742 - 0.0043 16.8 0.1 0.0054 16.5 0.1 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF4239) Lactamase_B_2 PF12706.7 ORF84052 - 2.4e-10 40.2 0.0 3.4e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain LcrR PF09621.10 ORF84052 - 0.15 11.5 0.0 0.69 9.4 0.0 1.8 2 0 0 2 2 2 0 Type III secretion system regulator (LcrR) Lipoprotein_X PF03305.13 ORF83856 - 0.053 13.3 5.9 0.078 12.7 2.1 2.4 2 1 1 3 3 3 0 Mycoplasma MG185/MG260 protein CfAFP PF05264.11 ORF80615 - 0.2 11.6 0.7 0.29 11.1 0.7 1.2 1 0 0 1 1 1 0 Choristoneura fumiferana antifreeze protein (CfAFP) Sugar_tr PF00083.24 ORF75447 - 0.00019 20.4 0.4 0.00022 20.2 0.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF75447 - 0.0025 16.8 4.1 0.0051 15.8 4.0 1.6 1 1 1 2 2 2 1 Major Facilitator Superfamily Colicin_im PF03857.13 ORF75447 - 0.013 15.4 1.4 0.041 13.8 0.0 1.9 2 0 0 2 2 2 0 Colicin immunity protein Ribosomal_L19e PF01280.20 ORF73124 - 8.8e-60 200.9 10.6 8.8e-60 200.9 10.6 1.9 1 1 1 2 2 2 1 Ribosomal protein L19e ChpXY PF10216.9 ORF6981 - 0.051 12.7 0.1 0.077 12.1 0.1 1.3 1 0 0 1 1 1 0 CO2 hydration protein (ChpXY) GDPD PF03009.17 ORF6981 - 0.066 12.9 0.0 0.094 12.4 0.0 1.2 1 0 0 1 1 1 0 Glycerophosphoryl diester phosphodiesterase family AC_N PF16214.5 ORF68009 - 0.0012 18.1 2.1 0.0014 17.9 2.1 1.0 1 0 0 1 1 1 1 Adenylyl cyclase N-terminal extracellular and transmembrane region Mt_ATP-synt_D PF05873.12 ORF68009 - 0.062 13.2 0.3 0.094 12.6 0.3 1.2 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) Ice_nucleation PF00818.17 ORF67885 - 0.46 10.7 0.2 0.46 10.7 0.2 3.6 4 0 0 4 4 4 0 Ice nucleation protein repeat DnaJ PF00226.31 ORF6681 - 1.1e-11 44.7 0.0 1.6e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain Metal_resist PF13801.6 ORF66724 - 3.7e-21 75.6 1.6 5.1e-21 75.2 1.6 1.2 1 0 0 1 1 1 1 Heavy-metal resistance LTXXQ PF07813.12 ORF66724 - 0.013 16.2 1.7 0.021 15.5 1.7 1.3 1 0 0 1 1 1 0 LTXXQ motif family protein DUF3584 PF12128.8 ORF66724 - 0.014 13.0 0.4 0.017 12.7 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 ORF66724 - 0.075 12.9 0.9 0.18 11.7 0.9 1.5 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain MRP-L47 PF06984.13 ORF66724 - 0.085 13.0 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) BLOC1_2 PF10046.9 ORF66724 - 0.098 13.0 0.4 0.14 12.4 0.4 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HMMR_C PF15908.5 ORF66724 - 0.11 12.8 0.9 0.21 11.9 0.7 1.4 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal Nepo_coat PF03391.15 ORF65803 - 0.14 11.7 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 Nepovirus coat protein, central domain T4_Gp59_C PF08994.10 ORF65456 - 0.098 13.3 2.5 0.14 12.8 0.4 2.1 1 1 1 2 2 2 0 T4 gene Gp59 loader of gp41 DNA helicase C-term Mog1 PF04603.12 ORF64785 - 1.5e-30 106.3 0.3 2.1e-30 105.9 0.3 1.2 1 0 0 1 1 1 1 Ran-interacting Mog1 protein Peptidase_M24 PF00557.24 ORF64785 - 0.081 12.6 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase family M24 DS PF01916.17 ORF63347 - 2.3e-69 233.8 0.0 2.7e-69 233.6 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Rhodanese PF00581.20 ORF63319 - 4.1e-11 43.4 0.1 5.7e-11 42.9 0.1 1.2 1 0 0 1 1 1 1 Rhodanese-like domain Guanylate_kin PF00625.21 ORF62796 - 3.1e-45 154.1 0.0 3.6e-45 153.9 0.0 1.0 1 0 0 1 1 1 1 Guanylate kinase Peptidase_C97 PF05903.14 ORF62646 - 9.5e-35 119.7 0.0 1.3e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 PPPDE putative peptidase domain HemY_N PF07219.13 ORF60079 - 1.3 9.3 3.8 3.2 8.0 2.1 2.1 2 0 0 2 2 2 0 HemY protein N-terminus N6-adenineMlase PF10237.9 ORF5943 - 0.11 12.3 0.1 0.16 11.7 0.1 1.4 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase Sugar_tr PF00083.24 ORF57814 - 0.00019 20.4 0.4 0.00022 20.2 0.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF57814 - 0.0025 16.8 4.1 0.0051 15.8 4.0 1.6 1 1 1 2 2 2 1 Major Facilitator Superfamily Colicin_im PF03857.13 ORF57814 - 0.013 15.4 1.4 0.041 13.8 0.0 1.9 2 0 0 2 2 2 0 Colicin immunity protein ECH_2 PF16113.5 ORF57040 - 4.6e-30 105.3 0.3 5.3e-30 105.1 0.3 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF4597 PF15366.6 ORF57040 - 0.032 14.0 0.1 0.063 13.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4597) FhuF_C PF11575.8 ORF55902 - 0.15 12.0 6.3 1.2 9.1 1.2 3.1 2 0 0 2 2 2 0 FhuF 2Fe-2S C-terminal domain Ribosomal_S27e PF01667.17 ORF55363 - 0.12 12.1 2.8 0.14 11.9 1.1 1.9 2 0 0 2 2 2 0 Ribosomal protein S27 Ras PF00071.22 ORF53543 - 3.6e-23 81.9 0.3 4.9e-23 81.5 0.3 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF53543 - 1.4e-06 28.5 0.2 4.8e-06 26.8 0.1 1.8 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Rubis-subs-bind PF09273.11 ORF53212 - 6.7e-12 46.2 0.1 1e-11 45.6 0.1 1.3 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding YihI PF04220.12 ORF53212 - 0.041 13.6 0.4 0.08 12.7 0.4 1.4 1 0 0 1 1 1 0 Der GTPase activator (YihI) zinc_ribbon_12 PF11331.8 ORF52612 - 0.13 12.1 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Probable zinc-ribbon domain Pyr_redox_2 PF07992.14 ORF52200 - 5.8e-06 25.8 0.0 3.5e-05 23.2 0.0 2.1 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF52200 - 0.038 14.5 0.0 0.079 13.5 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase PipA PF07108.11 ORF52200 - 0.056 13.0 0.1 0.062 12.8 0.1 1.2 1 0 0 1 1 1 0 PipA protein VF530 PF09905.9 ORF52134 - 0.14 12.3 0.1 0.25 11.6 0.1 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 HTH_36 PF13730.6 ORF50424 - 0.15 12.0 2.2 3.8 7.5 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain Jnk-SapK_ap_N PF09744.9 ORF49842 - 0.11 12.7 0.6 0.14 12.3 0.6 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF305 PF03713.13 ORF49842 - 0.13 12.4 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF305) Peptidase_C97 PF05903.14 ORF48117 - 9.5e-35 119.7 0.0 1.3e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 PPPDE putative peptidase domain HOOK PF05622.12 ORF45973 - 0.034 12.3 0.4 0.05 11.8 0.4 1.3 1 0 0 1 1 1 0 HOOK protein EF-hand_7 PF13499.6 ORF43269 - 3.6e-24 85.0 8.5 1.3e-13 51.2 1.5 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF43269 - 5.1e-22 75.7 12.0 2.3e-06 26.7 0.0 4.9 5 0 0 5 5 5 3 EF hand EF-hand_6 PF13405.6 ORF43269 - 5.6e-20 69.5 8.8 4.9e-07 29.2 0.1 4.7 5 0 0 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF43269 - 5.5e-14 51.8 6.7 2.3e-08 33.8 0.1 4.3 3 1 1 4 4 4 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF43269 - 3.2e-12 46.6 0.7 3.5e-07 30.4 0.1 2.6 2 1 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF43269 - 5.8e-11 41.4 3.5 0.00062 19.1 0.0 4.6 4 1 0 4 4 4 3 EF hand EF-hand_14 PF17959.1 ORF43269 - 0.00046 20.5 0.7 0.089 13.1 0.1 2.4 2 0 0 2 2 2 1 EF-hand domain Caleosin PF05042.13 ORF43269 - 0.00075 19.5 0.1 0.87 9.5 0.0 3.0 1 1 1 2 2 2 2 Caleosin related protein EF-hand_4 PF12763.7 ORF43269 - 0.0035 17.3 1.1 3 7.8 0.4 2.5 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand EAP30 PF04157.16 ORF43269 - 0.0074 15.6 0.1 0.11 11.8 0.1 2.2 1 1 0 1 1 1 1 EAP30/Vps36 family SCF PF02404.15 ORF43269 - 0.022 14.1 0.4 0.029 13.7 0.4 1.3 1 0 0 1 1 1 0 Stem cell factor B5 PF03484.15 ORF43269 - 0.032 14.5 0.0 1.5 9.2 0.0 2.4 2 0 0 2 2 2 0 tRNA synthetase B5 domain SUB1_ProdP9 PF18213.1 ORF43269 - 0.037 13.9 0.4 0.08 12.8 0.4 1.6 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 Ca_bind_SSO6904 PF18249.1 ORF43269 - 0.15 12.4 1.7 1.3 9.4 0.1 2.5 2 1 0 2 2 2 0 Calcium binding protein SSO6904 LexA_DNA_bind PF01726.16 ORF40336 - 0.05 13.4 0.0 0.13 12.0 0.0 1.8 1 0 0 1 1 1 0 LexA DNA binding domain Tim17 PF02466.19 ORF38819 - 2.9e-10 40.5 1.2 4.3e-10 40.0 1.2 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family SNARE_assoc PF09335.11 ORF38819 - 0.11 13.0 0.8 0.11 13.0 0.8 2.2 1 1 1 2 2 2 0 SNARE associated Golgi protein TPR_6 PF13174.6 ORF38819 - 0.12 13.1 0.0 0.31 11.8 0.0 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat ETF PF01012.21 ORF38485 - 6.9e-14 52.1 0.0 8.7e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain DUF5628 PF18621.1 ORF38197 - 0.14 12.6 0.0 0.29 11.6 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5628) Neogenin_C PF06583.12 ORF37748 - 0.14 11.9 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Neogenin C-terminus TMPIT PF07851.13 ORF36796 - 0.098 11.9 1.1 0.13 11.4 1.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein Pap_E4 PF02711.14 ORF31136 - 0.041 14.8 0.0 0.081 13.9 0.0 1.5 1 0 0 1 1 1 0 E4 protein ILEI PF15711.5 ORF30586 - 9.1e-20 70.9 0.0 1.3e-19 70.5 0.0 1.1 1 0 0 1 1 1 1 Interleukin-like EMT inducer PTS_EIIB PF00367.20 ORF30329 - 1.6e-12 46.7 0.1 2.7e-12 46.0 0.1 1.4 1 0 0 1 1 1 1 phosphotransferase system, EIIB GST_C PF00043.25 ORF30074 - 1.1e-08 35.2 0.1 1.7e-08 34.5 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF30074 - 2e-07 30.9 0.1 3.2e-07 30.3 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF30074 - 4.7e-06 26.7 0.2 8e-06 26.0 0.2 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF30074 - 2.8e-05 24.4 0.0 0.00013 22.3 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain CLAG PF03805.13 ORF30074 - 0.0076 13.9 0.0 0.0087 13.7 0.0 1.0 1 0 0 1 1 1 1 Cytoadherence-linked asexual protein GST_N PF02798.20 ORF30074 - 0.017 15.5 0.0 0.035 14.5 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF30074 - 0.11 12.8 0.0 0.23 11.8 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Alk_phosphatase PF00245.20 ORF28929 - 3.2e-58 197.6 0.3 7e-47 160.3 0.0 2.0 1 1 1 2 2 2 2 Alkaline phosphatase Metalloenzyme PF01676.18 ORF28929 - 7.5e-09 35.3 0.3 1e-08 34.9 0.3 1.2 1 0 0 1 1 1 1 Metalloenzyme superfamily Sulfatase PF00884.23 ORF28929 - 0.0013 18.2 0.4 0.032 13.6 0.1 2.2 1 1 1 2 2 2 1 Sulfatase Phosphodiest PF01663.22 ORF28929 - 0.0029 17.3 0.0 0.003 17.2 0.0 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase EF-hand_1 PF00036.32 ORF25419 - 2.2e-10 39.3 9.2 4.7e-05 22.6 2.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF25419 - 1.2e-08 34.2 7.4 0.0012 18.6 0.6 2.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF25419 - 1.1e-06 29.0 14.5 0.0017 18.7 1.2 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF25419 - 1.8e-05 24.0 8.0 0.00032 20.0 0.5 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF25419 - 6.5e-05 22.7 8.2 0.024 14.5 0.9 2.8 3 0 0 3 3 3 2 EF-hand domain pair BUD22 PF09073.10 ORF25419 - 0.005 16.3 18.9 0.0061 15.9 18.9 1.1 1 0 0 1 1 1 1 BUD22 CorA PF01544.18 ORF25419 - 0.04 13.2 0.1 0.057 12.7 0.1 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein EF-hand_4 PF12763.7 ORF25419 - 0.06 13.3 2.8 1.8 8.5 0.1 2.3 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_14 PF17959.1 ORF25419 - 0.14 12.5 2.3 1.1 9.7 0.5 2.4 2 1 0 2 2 2 0 EF-hand domain SAPS PF04499.15 ORF25419 - 4.2 6.0 8.5 4 6.1 8.5 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein CobT PF06213.12 ORF25419 - 7 6.0 29.8 10 5.4 29.8 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Gpr1_Fun34_YaaH PF01184.19 ORF2303 - 0.91 9.1 7.5 1.2 8.7 7.5 1.2 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family Ammonium_transp PF00909.21 ORF21049 - 1e-19 70.5 0.2 1.2e-19 70.4 0.2 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family FTA4 PF13093.6 ORF16415 - 0.00031 20.7 5.2 0.049 13.5 2.5 2.1 2 0 0 2 2 2 2 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 NDUF_B6 PF09782.9 ORF16415 - 0.0044 17.2 0.1 0.0073 16.4 0.1 1.4 1 0 0 1 1 1 1 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit RelE PF06296.12 ORF16415 - 0.0047 17.0 0.9 0.012 15.7 0.0 2.0 2 1 0 2 2 2 1 RelE toxin of RelE / RelB toxin-antitoxin system zf-DNA_Pol PF08996.10 ORF16415 - 0.012 15.4 1.0 0.012 15.4 1.0 1.5 2 0 0 2 2 2 0 DNA Polymerase alpha zinc finger DUF1456 PF07308.13 ORF16415 - 0.02 15.2 0.3 0.17 12.3 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1456) HTH_48 PF17906.1 ORF16415 - 0.061 13.4 0.1 3.3 7.9 0.0 2.4 2 0 0 2 2 2 0 HTH domain in Mos1 transposase HSP70 PF00012.20 ORF16415 - 0.76 7.9 9.8 0.061 11.5 0.6 2.0 1 1 1 2 2 2 0 Hsp70 protein DUF2408 PF10303.9 ORF16415 - 2 9.0 7.9 3.7 8.1 7.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) Dpoe2NT PF12213.8 ORF16415 - 6.1 7.2 10.6 1.4 9.2 4.3 2.8 3 0 0 3 3 3 0 DNA polymerases epsilon N terminal Spc29 PF17082.5 ORF149344 - 0.042 13.7 10.1 0.089 12.6 10.1 1.7 1 1 0 1 1 1 0 Spindle Pole Component 29 CLZ PF16526.5 ORF149344 - 0.077 13.4 3.0 2.4 8.6 1.3 2.5 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels FlaC_arch PF05377.11 ORF149344 - 0.83 10.1 5.3 10 6.6 2.1 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) HR1 PF02185.16 ORF149344 - 1.4 9.1 7.2 2.5 8.3 1.2 2.9 3 0 0 3 3 3 0 Hr1 repeat bZIP_1 PF00170.21 ORF149344 - 1.5 9.0 8.2 2.8 8.1 3.4 2.7 2 0 0 2 2 2 0 bZIP transcription factor Rhomboid PF01694.22 ORF145930 - 5.6e-10 39.4 5.8 5.6e-10 39.4 5.8 1.4 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.10 ORF145930 - 6.1e-06 26.7 1.1 1.1e-05 26.0 0.4 1.8 1 1 0 1 1 1 1 Eukaryotic integral membrane protein (DUF1751) HCV_NS1 PF01560.17 ORF145416 - 0.00077 18.2 0.3 0.00087 18.1 0.3 1.2 1 0 0 1 1 1 1 Hepatitis C virus non-structural protein E2/NS1 Dyp_perox PF04261.12 ORF14481 - 2.8e-70 236.9 0.0 3.1e-70 236.8 0.0 1.0 1 0 0 1 1 1 1 Dyp-type peroxidase family PCP PF02429.15 ORF144623 - 8.3e-56 188.3 8.5 1e-55 188.1 8.5 1.1 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein DUF1348 PF07080.11 ORF143066 - 8.5e-63 210.1 4.0 1e-62 209.8 4.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1348) SnoaL_2 PF12680.7 ORF143066 - 7.2e-09 36.2 0.4 1.1e-08 35.6 0.4 1.3 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.6 ORF143066 - 2.2e-05 24.8 0.1 3.4e-05 24.2 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL PF07366.12 ORF143066 - 0.0065 16.3 0.1 0.0098 15.7 0.1 1.3 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase Fn3-like PF14310.6 ORF139857 - 0.013 15.6 0.0 0.024 14.7 0.0 1.4 1 0 0 1 1 1 0 Fibronectin type III-like domain Aim19 PF10315.9 ORF137921 - 0.0012 19.1 1.8 0.0013 19.0 0.9 1.6 1 1 1 2 2 2 1 Altered inheritance of mitochondria protein 19 His_Phos_1 PF00300.22 ORF136375 - 4.4e-12 46.1 0.0 4e-05 23.4 0.0 2.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) Exc PF07825.11 ORF136375 - 0.047 13.7 0.1 0.12 12.4 0.0 1.7 2 0 0 2 2 2 0 Excisionase-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks129.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks129.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks129.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks129.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:00:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PAXX PF15384.6 ORF77497 - 0.072 12.8 0.1 0.28 10.8 0.0 2.0 2 0 0 2 2 2 0 PAXX, PAralog of XRCC4 and XLF, also called C9orf142 He_PIG PF05345.12 ORF77497 - 1.3 9.3 13.2 0.1 12.8 4.6 3.3 3 1 0 3 3 3 0 Putative Ig domain Pkinase PF00069.25 ORF75279 - 6e-76 255.3 0.2 1.1e-75 254.4 0.2 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF75279 - 7.9e-43 146.6 0.0 1.3e-42 145.9 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase POLO_box PF00659.18 ORF75279 - 1e-33 115.3 7.1 3e-17 62.6 0.3 3.1 2 1 0 2 2 2 2 POLO box duplicated region Kinase-like PF14531.6 ORF75279 - 2.5e-10 40.2 0.0 8.1e-08 31.9 0.0 2.3 1 1 1 2 2 2 2 Kinase-like DUF3919 PF13057.6 ORF75279 - 0.0025 17.4 1.5 0.0052 16.4 0.6 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF3919) APH PF01636.23 ORF75279 - 0.21 11.4 0.0 0.34 10.8 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Rnk_N PF14760.6 ORF38274 - 7.1e-05 23.2 0.0 92 3.6 0.0 7.1 8 0 0 8 8 8 0 Rnk N-terminus DUF1192 PF06698.11 ORF38274 - 0.0089 16.1 12.2 21 5.2 0.1 7.7 8 0 0 8 8 8 1 Protein of unknown function (DUF1192) ATG16 PF08614.11 ORF38274 - 0.72 10.0 45.1 0.041 14.1 3.0 4.7 3 2 1 4 4 4 0 Autophagy protein 16 (ATG16) MatE PF01554.18 ORF35085 - 4.4e-48 163.0 32.0 1.6e-26 92.9 9.1 2.9 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 ORF35085 - 0.00012 22.1 14.1 0.00012 22.1 14.1 4.4 2 1 2 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Mem_trans PF03547.18 ORF35085 - 0.00054 18.5 2.0 0.0024 16.3 2.3 2.1 1 1 0 1 1 1 1 Membrane transport protein Presenilin PF01080.17 ORF35085 - 0.0022 16.9 19.5 0.0022 16.9 19.5 2.0 2 0 0 2 2 2 1 Presenilin SBP_bac_5 PF00496.22 ORF141417 - 2.5e-79 267.0 4.5 4.2e-79 266.2 4.5 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Pkinase PF00069.25 ORF108827 - 3.4e-32 111.8 0.2 8.4e-22 77.8 0.0 2.5 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF108827 - 3.9e-08 32.9 1.9 0.0084 15.4 0.1 3.3 3 1 0 3 3 3 2 Protein tyrosine kinase LRR_9 PF14580.6 ORF106538 - 8.4e-09 35.2 2.9 1.2e-07 31.4 0.6 3.0 2 1 1 3 3 3 1 Leucine-rich repeat LRR_4 PF12799.7 ORF106538 - 5.8e-07 29.7 11.4 0.0019 18.5 0.3 4.0 4 0 0 4 4 4 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF106538 - 0.0076 16.0 6.7 0.39 10.5 0.4 3.0 1 1 1 2 2 2 2 Leucine rich repeat LRR_6 PF13516.6 ORF106538 - 0.21 11.8 10.5 1.8 8.8 0.0 4.6 4 0 0 4 4 4 0 Leucine Rich repeat LRR_1 PF00560.33 ORF106538 - 0.61 10.8 6.5 59 4.8 0.8 4.8 3 1 0 3 3 3 0 Leucine Rich Repeat Copine PF07002.16 ORF96239 - 5.8e-61 205.7 0.0 8.7e-61 205.1 0.0 1.3 1 0 0 1 1 1 1 Copine C2 PF00168.30 ORF96239 - 3e-09 37.1 0.0 8.2e-09 35.7 0.0 1.7 1 0 0 1 1 1 1 C2 domain vWA-TerF-like PF10138.9 ORF96239 - 0.025 14.7 0.2 0.049 13.7 0.2 1.5 1 0 0 1 1 1 0 vWA found in TerF C terminus SurA_N_3 PF13624.6 ORF95132 - 3.1e-54 183.1 6.6 3.1e-54 183.1 6.6 3.5 3 1 1 4 4 4 1 SurA N-terminal domain SurA_N_2 PF13623.6 ORF95132 - 3.7e-36 124.2 2.1 3.7e-36 124.2 2.1 3.9 4 1 1 5 5 5 1 SurA N-terminal domain Rotamase_2 PF13145.6 ORF95132 - 1.8e-34 119.2 25.9 3.5e-24 86.0 0.3 5.3 4 1 1 5 5 5 3 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF95132 - 4.9e-14 52.9 2.2 3.8e-13 50.0 0.1 3.1 2 1 0 2 2 2 1 PPIC-type PPIASE domain Rotamase PF00639.21 ORF95132 - 1.1e-13 51.9 8.6 1.4e-13 51.6 0.1 4.0 4 0 0 4 4 4 1 PPIC-type PPIASE domain SurA_N PF09312.11 ORF95132 - 5.1e-06 26.6 2.2 5.1e-06 26.6 2.2 2.3 2 0 0 2 2 2 1 SurA N-terminal domain DUF4214 PF13946.6 ORF95132 - 0.0037 17.3 0.2 0.02 14.9 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4214) DUF3783 PF12646.7 ORF95132 - 0.058 13.4 0.2 1.1 9.3 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3783) NDUF_C2 PF06374.11 ORF95132 - 0.18 11.9 0.2 0.54 10.4 0.2 1.8 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) CtnDOT_TraJ PF07863.11 ORF95132 - 0.55 10.9 4.2 2.4 8.8 0.1 3.2 3 0 0 3 3 3 0 Homologues of TraJ from Bacteroides conjugative transposon Ion_trans PF00520.31 ORF85444 - 6.8e-21 74.6 15.7 1e-20 74.0 15.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF85444 - 0.0047 16.7 0.0 0.1 12.6 0.0 3.0 3 0 0 3 3 3 1 EF-hand domain p25-alpha PF05517.12 ORF85444 - 0.089 13.0 0.5 0.18 12.0 0.0 1.7 2 0 0 2 2 2 0 p25-alpha EF-hand_7 PF13499.6 ORF85444 - 0.093 13.2 0.0 0.75 10.3 0.0 2.5 2 1 0 2 2 2 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF85444 - 0.11 12.1 0.1 2.8 7.7 0.0 3.0 3 0 0 3 3 3 0 EF hand PKD_channel PF08016.12 ORF85444 - 8.8 4.9 21.7 7.5e+02 -1.5 22.0 2.7 1 1 0 1 1 1 0 Polycystin cation channel Glyco_hydro_31 PF01055.26 ORF38061 - 4.2e-121 405.2 4.0 5.5e-121 404.8 4.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF38061 - 2.2e-16 59.9 0.1 7.5e-16 58.2 0.1 2.0 1 0 0 1 1 1 1 Galactose mutarotase-like COX7C PF02935.16 ORF38061 - 0.056 13.7 0.0 0.15 12.3 0.0 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc ATP-synt_I PF03899.15 ORF1267 - 0.03 14.7 1.6 2.3 8.7 0.3 2.3 2 0 0 2 2 2 0 ATP synthase I chain Bestrophin PF01062.21 ORF1267 - 0.058 12.8 0.5 0.12 11.7 0.5 1.6 1 1 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel GAS PF13851.6 ORF126571 - 0.0017 17.8 13.8 0.0025 17.2 13.8 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding Phage_GP20 PF06810.11 ORF126571 - 0.0041 16.9 15.8 0.0096 15.7 15.8 1.6 1 0 0 1 1 1 1 Phage minor structural protein GP20 Thioredoxin_8 PF13905.6 ORF126571 - 0.0047 17.2 0.0 0.013 15.8 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin-like EzrA PF06160.12 ORF126571 - 0.007 14.6 12.0 0.01 14.1 12.0 1.1 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA DUF812 PF05667.11 ORF126571 - 0.0084 15.0 7.2 0.013 14.5 7.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Laminin_I PF06008.14 ORF126571 - 0.01 15.5 13.9 0.017 14.8 13.9 1.2 1 0 0 1 1 1 0 Laminin Domain I T3SSipB PF16535.5 ORF126571 - 0.012 16.1 16.0 0.027 15.0 16.0 1.6 1 0 0 1 1 1 0 Type III cell invasion protein SipB YkyA PF10368.9 ORF126571 - 0.02 14.5 17.8 0.035 13.8 17.8 1.3 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein Thioredoxin PF00085.20 ORF126571 - 0.03 14.3 0.0 0.08 12.9 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin UPF0242 PF06785.11 ORF126571 - 0.039 14.1 12.8 0.062 13.4 12.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Spc7 PF08317.11 ORF126571 - 0.049 12.5 15.0 0.088 11.7 15.0 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Laminin_II PF06009.12 ORF126571 - 0.099 12.7 5.8 0.22 11.5 5.8 1.5 1 0 0 1 1 1 0 Laminin Domain II Atg14 PF10186.9 ORF126571 - 0.1 11.7 1.3 0.17 11.0 1.3 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Golgin_A5 PF09787.9 ORF126571 - 0.14 11.6 12.9 0.2 11.1 12.9 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 Exonuc_VII_L PF02601.15 ORF126571 - 0.15 11.6 2.0 0.24 10.9 2.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Cob_adeno_trans PF01923.18 ORF126571 - 0.23 11.6 2.0 0.41 10.8 2.0 1.3 1 0 0 1 1 1 0 Cobalamin adenosyltransferase DUF724 PF05266.14 ORF126571 - 0.32 10.8 11.3 0.54 10.1 11.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) MAD PF05557.13 ORF126571 - 0.43 8.9 11.8 0.6 8.4 11.8 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein AATF-Che1 PF13339.6 ORF126571 - 0.44 11.2 8.4 1.2 9.8 8.4 1.7 1 0 0 1 1 1 0 Apoptosis antagonizing transcription factor OmpH PF03938.14 ORF126571 - 0.47 10.8 16.1 0.91 9.9 16.1 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) AAA_13 PF13166.6 ORF126571 - 0.57 8.7 8.8 1.1 7.9 8.8 1.3 1 0 0 1 1 1 0 AAA domain PCRF PF03462.18 ORF126571 - 0.74 9.7 10.6 1.3 8.8 10.6 1.3 1 0 0 1 1 1 0 PCRF domain DUF3584 PF12128.8 ORF126571 - 0.74 7.3 12.2 1 6.8 12.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF4407 PF14362.6 ORF126571 - 0.9 8.8 12.5 1.8 7.9 12.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF948 PF06103.11 ORF126571 - 0.95 9.8 8.0 1.3 9.4 3.7 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) TMPIT PF07851.13 ORF126571 - 1 8.5 6.8 1.5 8.0 6.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein Seryl_tRNA_N PF02403.22 ORF126571 - 1 9.6 13.5 1.9 8.8 13.5 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain SMBP PF16785.5 ORF126571 - 1.1 9.5 10.5 2.5 8.4 10.5 1.6 1 0 0 1 1 1 0 Small metal-binding protein DUF2524 PF10732.9 ORF126571 - 1.3 9.3 14.4 0.2 12.0 5.6 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2524) APG6_N PF17675.1 ORF126571 - 1.6 9.2 25.6 4.3 7.9 25.6 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region FapA PF03961.13 ORF126571 - 2.1 6.9 9.3 3.1 6.3 9.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Borrelia_P83 PF05262.11 ORF126571 - 2.4 6.5 16.9 3.7 5.9 16.9 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF4404 PF14357.6 ORF126571 - 2.5 8.8 9.4 12 6.6 9.5 2.2 2 0 0 2 2 1 0 Domain of unknown function (DUF4404) DUF883 PF05957.13 ORF126571 - 2.8 8.6 13.4 5.1 7.8 3.4 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) V_ATPase_I PF01496.19 ORF126571 - 2.9 5.7 4.9 4.4 5.1 4.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FlaC_arch PF05377.11 ORF126571 - 3.5 8.1 6.4 9 6.8 5.9 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Hypoth_Ymh PF09509.10 ORF110492 - 0.34 10.8 1.3 24 4.8 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (Hypoth_ymh) NUC153 PF08159.12 ORF96761 - 3.2e-09 36.4 8.9 3.5e-07 29.9 0.1 3.3 3 0 0 3 3 3 2 NUC153 domain CSD PF00313.22 ORF96687 - 8e-49 163.4 0.0 2.1e-10 40.3 0.0 6.3 6 0 0 6 6 6 5 'Cold-shock' DNA-binding domain RRM_1 PF00076.22 ORF96687 - 1.1e-11 44.4 0.0 4.5e-11 42.4 0.0 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) OB_RNB PF08206.11 ORF96687 - 1.1e-10 41.0 3.6 0.24 11.1 0.1 5.4 5 0 0 5 5 5 4 Ribonuclease B OB domain RRM_7 PF16367.5 ORF96687 - 0.013 15.6 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif RRM_5 PF13893.6 ORF96687 - 0.041 13.5 0.0 0.069 12.7 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ribosomal_S17_N PF16205.5 ORF96687 - 0.072 13.5 0.1 30 5.1 0.0 3.5 4 0 0 4 4 4 0 Ribosomal_S17 N-terminal EF-hand_7 PF13499.6 ORF95468 - 1.3e-25 89.6 2.6 5.8e-11 42.7 0.0 5.3 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF95468 - 2.2e-22 76.9 12.7 7.6e-06 25.1 0.1 6.8 7 0 0 7 7 7 5 EF hand EF-hand_8 PF13833.6 ORF95468 - 2.2e-20 72.3 7.5 6.8e-07 29.0 0.2 5.8 5 0 0 5 5 5 5 EF-hand domain pair EF-hand_6 PF13405.6 ORF95468 - 1.1e-18 65.5 8.0 0.0024 17.7 0.0 7.4 7 0 0 7 7 7 5 EF-hand domain EF-hand_5 PF13202.6 ORF95468 - 4.4e-11 41.8 7.8 0.0012 18.3 0.0 5.2 5 0 0 5 5 5 3 EF hand EF-hand_4 PF12763.7 ORF95468 - 7.8e-07 29.0 2.1 0.058 13.3 0.0 4.5 4 1 1 5 5 5 2 Cytoskeletal-regulatory complex EF hand DNA_ligase_A_C PF04679.15 ORF95468 - 0.21 12.2 1.2 42 4.8 0.0 3.8 5 0 0 5 5 5 0 ATP dependent DNA ligase C terminal region EF-hand_7 PF13499.6 ORF93297 - 1.3e-25 89.6 2.6 5.8e-11 42.7 0.0 5.3 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF93297 - 2.2e-22 76.9 12.7 7.6e-06 25.1 0.1 6.8 7 0 0 7 7 7 5 EF hand EF-hand_8 PF13833.6 ORF93297 - 2.2e-20 72.3 7.5 6.8e-07 29.0 0.2 5.8 5 0 0 5 5 5 5 EF-hand domain pair EF-hand_6 PF13405.6 ORF93297 - 1.1e-18 65.5 8.0 0.0024 17.7 0.0 7.4 7 0 0 7 7 7 5 EF-hand domain EF-hand_5 PF13202.6 ORF93297 - 4.4e-11 41.8 7.8 0.0012 18.3 0.0 5.2 5 0 0 5 5 5 3 EF hand EF-hand_4 PF12763.7 ORF93297 - 7.8e-07 29.0 2.1 0.058 13.3 0.0 4.5 4 1 1 5 5 5 2 Cytoskeletal-regulatory complex EF hand DNA_ligase_A_C PF04679.15 ORF93297 - 0.21 12.2 1.2 42 4.8 0.0 3.8 5 0 0 5 5 5 0 ATP dependent DNA ligase C terminal region Pkinase_Tyr PF07714.17 ORF77117 - 5.7e-57 192.9 0.0 7.5e-57 192.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF77117 - 2.5e-47 161.4 0.0 3.7e-47 160.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF77117 - 0.048 12.4 0.0 0.076 11.8 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase GTP_EFTU PF00009.27 ORF68678 - 2.9e-43 147.7 0.0 5.6e-43 146.7 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF68678 - 2.1e-15 57.0 0.0 2.1e-15 57.0 0.0 1.9 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain MMR_HSR1 PF01926.23 ORF68678 - 1.5e-06 28.3 0.1 0.00018 21.6 0.1 2.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 ORF68678 - 0.009 16.4 0.0 0.025 14.9 0.0 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 AAA_29 PF13555.6 ORF68678 - 0.033 13.9 0.1 0.14 11.9 0.0 2.1 2 0 0 2 2 2 0 P-loop containing region of AAA domain ATPase_2 PF01637.18 ORF68678 - 0.036 14.0 1.6 0.038 13.9 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea DUF4551 PF15087.6 ORF68678 - 1.3 7.7 7.0 1.9 7.2 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) Presenilin PF01080.17 ORF68678 - 1.6 7.4 5.0 2.2 6.9 5.0 1.1 1 0 0 1 1 1 0 Presenilin DUF5427 PF10310.9 ORF68678 - 2.4 7.0 14.6 3.5 6.5 14.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5427) UCH PF00443.29 ORF6116 - 6.8e-39 133.9 0.5 1e-38 133.3 0.5 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 ORF6116 - 1e-17 64.2 3.0 1e-17 64.2 3.0 2.6 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein UCH_1 PF13423.6 ORF6116 - 2.3e-15 57.0 6.2 2.2e-14 53.8 6.2 2.3 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UBA PF00627.31 ORF6116 - 8.6e-08 31.9 0.2 7.7e-05 22.5 0.1 2.6 2 0 0 2 2 2 2 UBA/TS-N domain zinc_ribbon_9 PF14369.6 ORF6116 - 6.5 7.1 6.9 24 5.3 0.1 3.0 3 0 0 3 3 3 0 zinc-ribbon Peptidase_C1 PF00112.23 ORF143623 - 1e-92 310.1 20.6 5.6e-52 177.0 5.2 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF143623 - 2.4e-06 26.6 5.9 0.0011 17.8 0.7 2.2 2 0 0 2 2 2 2 Peptidase C1-like family UBA_e1_thiolCys PF10585.9 ORF137293 - 6.6e-69 232.6 9.3 1.5e-68 231.5 9.3 1.6 1 0 0 1 1 1 1 Ubiquitin-activating enzyme active site ThiF PF00899.21 ORF137293 - 6.4e-54 182.9 0.0 8.9e-54 182.4 0.0 1.1 1 0 0 1 1 1 1 ThiF family E1_UFD PF09358.10 ORF137293 - 1.4e-08 35.3 2.6 1.4e-08 35.3 2.6 2.7 2 1 0 2 2 2 1 Ubiquitin fold domain E2_bind PF08825.10 ORF137293 - 0.0047 17.1 0.2 0.019 15.1 0.2 2.0 1 0 0 1 1 1 1 E2 binding domain SeqA PF03925.13 ORF137293 - 0.023 14.6 0.1 0.077 13.0 0.0 1.9 2 0 0 2 2 2 0 SeqA protein C-terminal domain TsaE PF02367.17 ORF137293 - 0.065 13.2 0.0 1.8 8.6 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDC24 PF06395.11 ORF137293 - 0.098 12.9 0.1 0.48 10.7 0.1 2.2 1 0 0 1 1 1 0 CDC24 Calponin Peptidase_S49_N PF08496.10 ORF137293 - 4.4 7.3 9.5 0.23 11.5 2.2 2.5 3 0 0 3 3 3 0 Peptidase family S49 N-terminal Peptidase_C1 PF00112.23 ORF122645 - 1.8e-93 312.6 18.9 5.6e-52 177.0 5.2 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF122645 - 1.5e-06 27.3 5.4 0.0011 17.8 0.7 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF120889 - 4.4e-91 304.8 22.3 1.7e-46 159.0 6.9 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF120889 - 0.006 15.4 4.9 0.25 10.1 0.4 2.3 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF111280 - 1.2e-93 313.3 22.0 5.3e-50 170.5 5.6 2.2 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF111280 - 0.12 11.2 8.0 1.5 7.5 1.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF100245 - 2.1e-93 312.4 18.9 5.6e-52 177.0 5.2 2.1 2 0 0 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF100245 - 1.5e-06 27.3 5.4 0.0011 17.8 0.7 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FAD-oxidase_C PF02913.19 ORF76477 - 1.3e-46 159.3 0.0 2.5e-46 158.4 0.0 1.5 2 0 0 2 2 2 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 ORF76477 - 8.9e-36 122.7 0.1 1.6e-35 121.8 0.1 1.5 1 0 0 1 1 1 1 FAD binding domain ABC_membrane PF00664.23 ORF45398 - 1.3e-47 162.8 8.1 1.7e-47 162.4 8.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF45398 - 9.6e-33 113.6 0.0 1.6e-32 112.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF45398 - 2.2e-05 24.0 0.2 0.0003 20.3 0.2 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF45398 - 0.0012 19.0 0.8 0.06 13.6 0.4 3.1 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 ORF45398 - 0.0047 16.6 0.1 0.015 15.1 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF45398 - 0.0047 16.8 0.0 0.01 15.8 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 ORF45398 - 0.014 15.7 0.0 0.048 14.0 0.0 1.9 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 ORF45398 - 0.037 14.3 0.2 0.17 12.2 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF45398 - 0.037 13.6 0.1 0.39 10.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 ORF45398 - 0.64 9.9 2.7 3.6 7.5 0.1 2.7 3 0 0 3 3 3 0 NACHT domain PHD PF00628.29 ORF147776 - 0.33 10.9 6.8 0.92 9.5 6.4 2.0 1 1 0 1 1 1 0 PHD-finger YtxH PF12732.7 ORF147776 - 0.43 11.2 24.2 0.28 11.7 1.1 4.5 4 1 0 4 4 4 0 YtxH-like protein PIN_6 PF17146.4 ORF147776 - 0.73 10.4 3.3 1.6 9.2 0.0 3.2 3 1 0 3 3 3 0 PIN domain of ribonuclease Ndc1_Nup PF09531.10 ORF147776 - 0.94 8.1 8.4 1.3 7.6 8.4 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup zf-rbx1 PF12678.7 ORF127610 - 3.5e-06 27.2 8.7 7.8e-06 26.1 8.7 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF127610 - 7.2e-06 26.2 3.5 7.2e-06 26.2 3.5 2.8 3 0 0 3 3 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF127610 - 4.1e-05 23.3 2.8 4.1e-05 23.3 2.8 2.4 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF127610 - 0.0027 17.6 1.1 0.0077 16.1 1.1 1.8 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF127610 - 0.0054 16.3 0.6 0.017 14.7 0.6 1.8 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF127610 - 0.0058 16.6 10.3 0.055 13.4 10.6 2.4 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF127610 - 0.0064 16.3 9.3 0.0064 16.3 9.3 2.5 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF127610 - 0.014 15.2 10.4 0.048 13.4 0.4 3.1 2 0 0 2 2 2 0 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF127610 - 0.014 15.4 0.8 0.037 14.1 0.8 1.7 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger TMEM151 PF14857.6 ORF127610 - 0.022 13.7 0.4 1.1 8.1 0.2 2.5 2 0 0 2 2 2 0 TMEM151 family zinc_ribbon_16 PF17034.5 ORF127610 - 0.095 12.9 2.2 0.26 11.5 1.5 2.1 2 0 0 2 2 2 0 Zinc-ribbon like family DUF2921 PF11145.8 ORF127610 - 0.14 9.9 3.7 0.98 7.2 1.7 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2921) zf-RING_UBOX PF13445.6 ORF127610 - 0.97 9.5 10.4 3.8 7.6 10.4 2.1 1 1 0 1 1 1 0 RING-type zinc-finger RAP-1 PF03085.15 ORF98106 - 0.26 11.0 8.1 0.044 13.5 2.7 2.3 2 0 0 2 2 2 0 Rhoptry-associated protein 1 (RAP-1) PHD PF00628.29 ORF87311 - 2.7e-07 30.4 11.4 1.5e-06 27.9 7.4 2.9 2 0 0 2 2 2 1 PHD-finger DZR PF12773.7 ORF87311 - 0.052 13.6 6.5 1.7 8.8 5.6 3.4 1 1 0 1 1 1 0 Double zinc ribbon C1_1 PF00130.22 ORF87311 - 0.43 10.5 9.2 0.12 12.3 4.6 2.6 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-CW PF07496.15 ORF87311 - 1.1 9.3 7.4 2 8.5 2.6 3.3 2 0 0 2 2 2 0 CW-type Zinc Finger DUF1631 PF07793.11 ORF85257 - 0.029 12.8 0.5 0.56 8.6 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1631) MgtE_N PF03448.17 ORF85257 - 0.15 12.6 1.3 50 4.6 0.1 3.2 3 0 0 3 3 3 0 MgtE intracellular N domain Bombinin PF05298.11 ORF85257 - 0.2 11.3 0.0 7.5 6.2 0.0 2.3 2 0 0 2 2 2 0 Bombinin BLOC1_2 PF10046.9 ORF59159 - 0.00019 21.6 30.1 0.0015 18.8 14.5 3.9 2 1 1 3 3 3 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 HOOK PF05622.12 ORF59159 - 0.0017 16.6 29.9 0.0017 16.6 29.9 2.2 2 0 0 2 2 2 1 HOOK protein DUF4795 PF16043.5 ORF59159 - 0.01 15.4 0.5 0.01 15.4 0.5 3.4 2 1 0 2 2 1 0 Domain of unknown function (DUF4795) XhlA PF10779.9 ORF59159 - 0.014 15.6 4.7 0.014 15.6 4.7 4.7 2 1 2 4 4 4 0 Haemolysin XhlA DUF4201 PF13870.6 ORF59159 - 0.015 15.1 1.8 0.015 15.1 1.8 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4201) Seryl_tRNA_N PF02403.22 ORF59159 - 0.016 15.4 20.1 0.016 15.4 20.1 4.1 3 1 1 4 4 4 0 Seryl-tRNA synthetase N-terminal domain V_ATPase_I PF01496.19 ORF59159 - 0.026 12.5 26.6 0.0069 14.4 19.6 2.1 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family HTH_3 PF01381.22 ORF59159 - 0.044 13.8 1.2 0.11 12.6 1.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_19 PF12844.7 ORF59159 - 0.045 13.8 3.3 0.22 11.6 3.3 2.3 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_GP20 PF06810.11 ORF59159 - 6.4 6.6 33.3 4.1 7.2 10.6 3.5 2 1 1 3 3 3 0 Phage minor structural protein GP20 ATG16 PF08614.11 ORF59159 - 8.7 6.5 35.3 1.2 9.3 26.2 2.7 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Uds1 PF15456.6 ORF59159 - 9.6 6.4 29.5 0.095 12.9 17.6 3.0 2 1 1 3 3 3 0 Up-regulated During Septation CFAP91 PF14738.6 ORF25904 - 8.3e-55 185.0 8.4 8.3e-55 185.0 8.4 4.4 3 1 1 4 4 4 1 Cilia- and flagella-associated protein 91 DsrD PF08679.11 ORF25904 - 0.044 14.0 0.3 0.14 12.5 0.3 1.8 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) NIF PF03031.18 ORF84772 - 2.6e-41 141.0 1.9 7.3e-41 139.5 1.9 1.8 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF2192 PF09958.9 ORF84772 - 0.37 10.3 4.5 6.9 6.1 0.2 2.6 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2192) PDEase_I PF00233.19 ORF82838 - 6e-77 258.6 5.9 1e-76 257.8 5.9 1.4 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Ion_trans PF00520.31 ORF82838 - 8.3e-09 35.0 9.3 1.8e-08 33.9 9.3 1.6 1 0 0 1 1 1 1 Ion transport protein Seryl_tRNA_N PF02403.22 ORF82838 - 0.34 11.1 7.5 0.16 12.3 1.3 2.7 3 0 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Imm40 PF15569.6 ORF146260 - 0.0068 16.5 1.5 0.056 13.6 0.1 3.2 3 0 0 3 3 3 1 Immunity protein 40 DUF5522 PF17653.1 ORF141784 - 1.4 8.9 13.4 0.15 12.0 5.3 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5522) WD40 PF00400.32 ORF133858 - 1.8e-25 88.7 2.9 4e-05 24.3 0.1 8.6 8 1 0 8 8 8 6 WD domain, G-beta repeat Nup160 PF11715.8 ORF133858 - 3.6e-06 25.9 0.6 0.0049 15.6 0.1 3.8 2 1 1 3 3 3 1 Nucleoporin Nup120/160 ANAPC4_WD40 PF12894.7 ORF133858 - 5.7e-05 23.3 0.3 9.4 6.6 0.0 5.4 3 3 3 7 7 7 2 Anaphase-promoting complex subunit 4 WD40 domain PQQ_3 PF13570.6 ORF133858 - 0.00031 21.1 2.2 0.33 11.5 0.0 4.9 6 1 1 7 7 7 1 PQQ-like domain Nucleoporin_N PF08801.11 ORF133858 - 0.0011 17.8 0.1 0.46 9.2 0.0 3.8 2 1 1 4 4 4 1 Nup133 N terminal like Ge1_WD40 PF16529.5 ORF133858 - 0.0057 15.7 1.8 0.083 11.8 0.2 3.4 3 2 1 4 4 4 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Frtz PF11768.8 ORF133858 - 0.026 12.8 0.0 2.5 6.3 0.0 2.2 2 0 0 2 2 2 0 WD repeat-containing and planar cell polarity effector protein Fritz PQQ_2 PF13360.6 ORF133858 - 0.054 13.1 0.0 0.87 9.1 0.0 2.8 2 1 0 2 2 2 0 PQQ-like domain Copine PF07002.16 ORF110421 - 4.5e-53 179.9 0.1 7e-53 179.3 0.1 1.3 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF110421 - 0.021 14.9 0.1 0.047 13.8 0.1 1.6 1 0 0 1 1 1 0 vWA found in TerF C terminus Helicase_C_4 PF13871.6 ORF99855 - 1e-72 245.1 0.0 1.4e-72 244.6 0.0 1.2 1 0 0 1 1 1 1 C-terminal domain on Strawberry notch homologue SR-25 PF10500.9 ORF9218 - 0.003 17.2 6.4 0.0055 16.3 6.4 1.3 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein CDK2AP PF09806.9 ORF9218 - 0.49 10.4 9.2 0.86 9.6 9.2 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein Pep_deformylase PF01327.21 ORF67788 - 0.12 11.9 0.4 0.52 9.9 0.0 2.2 3 0 0 3 3 3 0 Polypeptide deformylase HSP70 PF00012.20 ORF58288 - 1.7e-249 829.1 10.0 2.5e-249 828.5 10.0 1.2 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF58288 - 6.1e-12 45.0 3.3 1.2e-11 44.0 1.5 2.1 2 0 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.16 ORF58288 - 0.022 14.5 0.0 0.066 12.9 0.0 1.8 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain HMGL-like PF00682.19 ORF58288 - 0.079 12.5 0.8 0.18 11.3 0.2 1.9 2 0 0 2 2 2 0 HMGL-like Tn7_Tnp_TnsA_C PF08721.11 ORF58288 - 0.14 12.8 0.1 0.39 11.4 0.1 1.7 1 0 0 1 1 1 0 TnsA endonuclease C terminal Ion_trans PF00520.31 ORF54683 - 5.5e-54 183.0 28.0 7.7e-54 182.5 28.0 1.2 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF54683 - 5.8e-09 35.1 24.9 2.4e-08 33.1 8.5 2.6 1 1 2 3 3 3 2 Polycystin cation channel BUD22 PF09073.10 ORF54683 - 0.057 12.8 16.5 0.083 12.2 16.5 1.2 1 0 0 1 1 1 0 BUD22 DUF2418 PF10332.9 ORF54683 - 0.53 10.8 4.9 2.3 8.8 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2418) Pkinase PF00069.25 ORF135540 - 1.1e-13 51.2 0.0 1.9e-13 50.4 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain EF-hand_7 PF13499.6 ORF135540 - 2.1e-09 37.7 0.2 2.6e-07 31.0 0.1 2.6 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF135540 - 8e-06 25.4 0.1 0.29 11.2 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF135540 - 1.1e-05 24.6 0.2 0.14 11.8 0.0 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF135540 - 5.5e-05 22.9 1.9 0.0077 16.1 0.0 3.5 2 1 1 3 3 3 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF135540 - 0.00041 20.7 0.6 0.00085 19.6 0.6 1.6 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Pkinase_Tyr PF07714.17 ORF135540 - 0.00076 18.8 0.0 0.0014 18.0 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_5 PF13202.6 ORF135540 - 0.2 11.2 0.0 2.4 7.8 0.0 2.4 2 0 0 2 2 2 0 EF hand Pep_deformylase PF01327.21 ORF114260 - 0.14 11.8 0.4 0.52 9.9 0.0 2.1 3 0 0 3 3 3 0 Polypeptide deformylase MatE PF01554.18 ORF113212 - 4.2e-48 163.0 32.0 1.6e-26 92.9 9.1 2.9 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 ORF113212 - 9.2e-05 22.5 13.6 9.2e-05 22.5 13.6 4.4 2 1 2 4 4 4 1 Polysaccharide biosynthesis C-terminal domain Presenilin PF01080.17 ORF113212 - 0.0034 16.2 18.8 0.0034 16.2 18.8 1.9 2 0 0 2 2 2 1 Presenilin Zip PF02535.22 ORF113212 - 0.0062 15.8 9.3 0.013 14.7 9.3 1.7 1 0 0 1 1 1 1 ZIP Zinc transporter GAGA_bind PF06217.12 ORF113212 - 3.7 7.7 29.6 5.7 7.1 29.6 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family DUF4064 PF13273.6 ORF110820 - 0.057 13.7 1.5 8.4 6.7 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) DUF1126 PF06565.12 ORF99453 - 9e-94 308.3 5.8 3.6e-32 110.3 0.1 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_8 PF13833.6 ORF99453 - 2.7e-12 46.3 2.9 1.9e-06 27.6 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF99453 - 1.4e-11 43.1 2.3 0.00011 21.5 0.2 3.1 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF99453 - 3.2e-10 40.3 0.5 0.00039 20.8 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF99453 - 5.9e-10 38.2 1.5 4.2e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF99453 - 6.3e-07 28.8 1.0 0.012 15.5 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF99453 - 0.0092 16.3 0.1 0.024 14.9 0.1 1.8 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region DUF1126 PF06565.12 ORF61388 - 9e-94 308.3 5.8 3.6e-32 110.3 0.1 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_8 PF13833.6 ORF61388 - 2.7e-12 46.3 2.9 1.9e-06 27.6 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF61388 - 1.4e-11 43.1 2.3 0.00011 21.5 0.2 3.1 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF61388 - 3.2e-10 40.3 0.5 0.00039 20.8 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF61388 - 5.9e-10 38.2 1.5 4.2e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF61388 - 6.3e-07 28.8 1.0 0.012 15.5 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF61388 - 0.0092 16.3 0.1 0.024 14.9 0.1 1.8 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region MKT1_C PF12246.8 ORF51012 - 1.8e-44 151.8 0.0 2.6e-44 151.3 0.0 1.2 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication MKT1_N PF12247.8 ORF51012 - 4.3e-21 75.1 0.1 8.2e-21 74.2 0.1 1.5 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication DUF1126 PF06565.12 ORF144395 - 9e-94 308.3 5.8 3.6e-32 110.3 0.1 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_8 PF13833.6 ORF144395 - 2.7e-12 46.3 2.9 1.9e-06 27.6 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF144395 - 1.4e-11 43.1 2.3 0.00011 21.5 0.2 3.1 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF144395 - 3.2e-10 40.3 0.5 0.00039 20.8 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF144395 - 5.9e-10 38.2 1.5 4.2e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF144395 - 6.3e-07 28.8 1.0 0.012 15.5 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF144395 - 0.0092 16.3 0.1 0.024 14.9 0.1 1.8 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Thioredoxin_6 PF13848.6 ORF139107 - 1.8e-06 28.0 2.4 1.8e-06 28.0 2.4 4.0 3 2 1 4 4 4 2 Thioredoxin-like domain Glyco_hydro_81 PF03639.13 ORF139107 - 0.022 13.9 1.2 11 5.1 0.7 3.6 3 1 0 3 3 3 0 Glycosyl hydrolase family 81 N-terminal domain EF-hand_12 PF17901.1 ORF139107 - 0.062 13.8 1.6 0.64 10.5 0.2 2.7 2 0 0 2 2 2 0 EF-hand fold domain DUF1126 PF06565.12 ORF135185 - 9e-94 308.3 5.8 3.6e-32 110.3 0.1 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain EF-hand_8 PF13833.6 ORF135185 - 2.7e-12 46.3 2.9 1.9e-06 27.6 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF135185 - 1.4e-11 43.1 2.3 0.00011 21.5 0.2 3.1 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF135185 - 3.2e-10 40.3 0.5 0.00039 20.8 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF135185 - 5.9e-10 38.2 1.5 4.2e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF135185 - 6.3e-07 28.8 1.0 0.012 15.5 0.0 3.3 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF135185 - 0.0092 16.3 0.1 0.024 14.9 0.1 1.8 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Choline_transpo PF04515.12 ORF131635 - 6.5e-80 268.8 49.8 6.5e-80 268.8 49.8 2.6 2 1 2 4 4 4 1 Plasma-membrane choline transporter Cyclin_C PF02984.19 ORF131635 - 0.073 13.2 0.1 0.15 12.1 0.1 1.5 1 0 0 1 1 1 0 Cyclin, C-terminal domain ISK_Channel PF02060.15 ORF131635 - 0.73 9.6 3.1 5.3 6.8 0.1 2.6 2 0 0 2 2 2 0 Slow voltage-gated potassium channel EF-hand_1 PF00036.32 ORF122029 - 3.5e-09 35.5 0.4 0.0007 19.0 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF122029 - 1.6e-08 33.8 0.1 0.0079 16.1 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF122029 - 6.3e-07 29.8 0.3 1.5e-06 28.6 0.3 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF122029 - 8.4e-07 28.7 0.7 0.0029 17.4 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain pair Peptidase_M54 PF07998.11 ORF122029 - 3.1e-06 27.3 0.7 5.4e-06 26.5 0.7 1.3 1 0 0 1 1 1 1 Peptidase family M54 EF-hand_5 PF13202.6 ORF122029 - 0.00047 19.5 0.2 0.0086 15.5 0.0 2.5 2 0 0 2 2 2 1 EF hand SPARC_Ca_bdg PF10591.9 ORF122029 - 0.0015 18.8 0.0 0.0036 17.6 0.0 1.6 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Ribosomal_60s PF00428.19 ORF122029 - 0.048 14.2 1.3 0.097 13.3 1.3 1.5 1 0 0 1 1 1 0 60s Acidic ribosomal protein Peptidase_M57 PF12388.8 ORF122029 - 0.12 11.9 0.2 0.23 11.0 0.2 1.3 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Ank_2 PF12796.7 ORF33684 - 5.7e-20 71.7 0.0 5.1e-07 30.2 0.0 3.6 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF33684 - 1e-15 56.2 0.5 0.0027 18.0 0.0 5.6 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF33684 - 1.1e-12 47.8 1.8 5.5e-06 26.6 0.0 4.5 4 1 1 5 5 5 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF33684 - 3.1e-12 46.4 0.3 0.0033 17.8 0.0 5.1 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF33684 - 1.3e-11 44.8 0.0 0.0029 18.2 0.0 4.3 3 1 1 4 4 4 4 Ankyrin repeats (many copies) DUF647 PF04884.14 ORF148471 - 2.4e-61 207.4 2.9 3.3e-61 207.0 2.9 1.2 1 0 0 1 1 1 1 Vitamin B6 photo-protection and homoeostasis Tudor-knot PF11717.8 ORF148471 - 0.33 10.9 1.8 0.46 10.4 0.0 2.3 3 0 0 3 3 3 0 RNA binding activity-knot of a chromodomain Kinesin PF00225.23 ORF85969 - 9.5e-97 323.9 0.1 9.5e-97 323.9 0.1 2.6 2 1 0 3 3 3 1 Kinesin motor domain Microtub_bd PF16796.5 ORF85969 - 1.9e-46 157.7 0.1 1.9e-46 157.7 0.1 2.7 3 1 0 3 3 3 1 Microtubule binding AAA_22 PF13401.6 ORF85969 - 0.65 10.3 6.0 1.2 9.4 0.0 2.8 2 1 0 2 2 2 0 AAA domain DUF4407 PF14362.6 ORF85969 - 3.5 6.9 15.5 7.9 5.7 15.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) BLOC1_2 PF10046.9 ORF18483 - 0.00019 21.7 30.1 0.0015 18.8 14.5 3.9 2 1 1 3 3 3 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 HOOK PF05622.12 ORF18483 - 0.0017 16.6 29.9 0.0017 16.6 29.9 2.2 2 0 0 2 2 2 1 HOOK protein DUF4795 PF16043.5 ORF18483 - 0.01 15.4 0.5 0.01 15.4 0.5 3.4 2 1 0 2 2 1 0 Domain of unknown function (DUF4795) XhlA PF10779.9 ORF18483 - 0.013 15.7 4.6 0.013 15.7 4.6 4.7 2 1 2 4 4 4 0 Haemolysin XhlA DUF4201 PF13870.6 ORF18483 - 0.015 15.1 1.8 0.015 15.1 1.8 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4201) Seryl_tRNA_N PF02403.22 ORF18483 - 0.016 15.5 20.1 0.016 15.5 20.1 4.1 3 1 1 4 4 4 0 Seryl-tRNA synthetase N-terminal domain V_ATPase_I PF01496.19 ORF18483 - 0.025 12.5 26.6 0.0068 14.4 19.6 2.1 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family HTH_3 PF01381.22 ORF18483 - 0.044 13.9 1.2 0.1 12.6 1.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_19 PF12844.7 ORF18483 - 0.05 13.6 3.3 0.22 11.6 3.3 2.2 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_GP20 PF06810.11 ORF18483 - 6.3 6.6 33.3 4.8 7.0 10.6 3.5 2 1 1 3 3 3 0 Phage minor structural protein GP20 ATG16 PF08614.11 ORF18483 - 7.5 6.7 35.1 1.1 9.4 26.1 2.7 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Uds1 PF15456.6 ORF18483 - 9.1 6.5 29.5 0.093 12.9 17.6 3.0 2 1 1 3 3 3 0 Up-regulated During Septation BaxI_1 PF12811.7 ORF146753 - 0.0012 18.4 0.6 0.0033 17.0 0.6 1.7 1 0 0 1 1 1 1 Bax inhibitor 1 like Syja_N PF02383.18 ORF132583 - 5.8e-78 262.4 3.7 8.1e-78 261.9 3.7 1.2 1 0 0 1 1 1 1 SacI homology domain WD40 PF00400.32 ORF99557 - 5e-07 30.3 3.1 3.4 8.7 0.1 5.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF99557 - 0.002 18.4 0.0 3.9 7.8 0.0 4.2 4 0 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF91304 - 5e-07 30.3 3.1 3.4 8.7 0.1 5.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF91304 - 0.002 18.4 0.0 3.9 7.8 0.0 4.2 4 0 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain BLOC1_2 PF10046.9 ORF83261 - 0.00016 21.9 30.1 0.0015 18.8 14.5 4.0 2 1 1 3 3 3 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 HOOK PF05622.12 ORF83261 - 0.0017 16.6 29.9 0.0017 16.6 29.9 2.2 2 0 0 2 2 2 1 HOOK protein DUF4795 PF16043.5 ORF83261 - 0.01 15.4 0.5 0.01 15.4 0.5 3.4 2 1 0 2 2 1 0 Domain of unknown function (DUF4795) XhlA PF10779.9 ORF83261 - 0.013 15.7 4.6 0.013 15.7 4.6 4.7 2 1 2 4 4 4 0 Haemolysin XhlA DUF4201 PF13870.6 ORF83261 - 0.014 15.1 1.8 0.014 15.1 1.8 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4201) Seryl_tRNA_N PF02403.22 ORF83261 - 0.016 15.5 20.1 0.016 15.5 20.1 4.1 3 1 1 4 4 4 0 Seryl-tRNA synthetase N-terminal domain V_ATPase_I PF01496.19 ORF83261 - 0.025 12.5 26.6 0.0068 14.4 19.6 2.1 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family HTH_3 PF01381.22 ORF83261 - 0.044 13.9 1.2 0.1 12.6 1.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix HTH_19 PF12844.7 ORF83261 - 0.051 13.6 3.3 0.22 11.6 3.3 2.2 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_GP20 PF06810.11 ORF83261 - 6.1 6.6 33.3 4.8 7.0 10.6 3.5 2 1 1 3 3 3 0 Phage minor structural protein GP20 ATG16 PF08614.11 ORF83261 - 7.4 6.7 35.1 1.1 9.4 26.1 2.7 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Uds1 PF15456.6 ORF83261 - 9 6.5 29.5 0.093 12.9 17.6 3.0 2 1 1 3 3 3 0 Up-regulated During Septation WD40 PF00400.32 ORF82387 - 5e-07 30.3 3.1 3.4 8.7 0.1 5.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF82387 - 0.002 18.4 0.0 3.9 7.8 0.0 4.2 4 0 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF74785 - 5e-07 30.3 3.1 3.4 8.7 0.1 5.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF74785 - 0.002 18.4 0.0 3.9 7.8 0.0 4.2 4 0 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain HOOK PF05622.12 ORF6790 - 0.0011 17.2 31.2 0.0011 17.2 31.2 3.0 2 1 1 3 3 3 2 HOOK protein TMF_DNA_bd PF12329.8 ORF6790 - 0.0023 17.9 19.4 0.0023 17.9 19.4 5.3 2 1 3 5 5 4 1 TATA element modulatory factor 1 DNA binding BLOC1_2 PF10046.9 ORF6790 - 0.0027 18.0 15.0 0.0027 18.0 15.0 5.1 3 1 3 6 6 6 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Seryl_tRNA_N PF02403.22 ORF6790 - 0.013 15.7 19.7 0.013 15.7 19.7 4.2 2 1 1 3 3 2 0 Seryl-tRNA synthetase N-terminal domain HTH_3 PF01381.22 ORF6790 - 0.03 14.4 1.2 0.1 12.6 1.2 2.0 1 0 0 1 1 1 0 Helix-turn-helix Phage_GP20 PF06810.11 ORF6790 - 0.086 12.6 53.0 0.63 9.8 17.5 4.2 2 1 2 4 4 4 0 Phage minor structural protein GP20 Spc7 PF08317.11 ORF6790 - 0.79 8.6 56.9 1.7 7.4 34.6 3.5 2 1 1 3 3 3 0 Spc7 kinetochore protein HrpB7 PF09486.10 ORF6790 - 2.8 8.3 21.2 14 6.0 13.6 3.8 2 1 0 3 3 3 0 Bacterial type III secretion protein (HrpB7) PspA_IM30 PF04012.12 ORF6790 - 4.3 6.9 40.7 3 7.4 26.0 3.0 2 1 1 3 3 3 0 PspA/IM30 family HAUS-augmin3 PF14932.6 ORF6790 - 6.1 6.3 47.1 2.5 7.6 14.2 3.2 2 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 Fez1 PF06818.15 ORF6790 - 6.4 7.2 51.6 0.023 15.2 26.2 3.1 1 1 1 2 2 1 0 Fez1 ATG16 PF08614.11 ORF6790 - 7.9 6.7 51.2 84 3.3 27.5 3.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIVA PF05103.13 ORF6790 - 8.5 6.5 49.1 1.8 8.6 22.2 2.9 2 1 1 3 3 3 0 DivIVA protein TMF_DNA_bd PF12329.8 ORF63729 - 0.0019 18.1 19.1 0.0019 18.1 19.1 5.4 2 1 2 4 4 3 1 TATA element modulatory factor 1 DNA binding BLOC1_2 PF10046.9 ORF63729 - 0.0026 18.0 15.0 0.0026 18.0 15.0 5.4 3 1 3 6 6 6 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 HOOK PF05622.12 ORF63729 - 0.0026 16.0 32.1 0.0026 16.0 32.1 3.0 2 1 1 3 3 3 2 HOOK protein DUF4795 PF16043.5 ORF63729 - 0.01 15.4 0.5 0.01 15.4 0.5 4.3 3 1 2 5 5 4 0 Domain of unknown function (DUF4795) Seryl_tRNA_N PF02403.22 ORF63729 - 0.013 15.7 19.7 0.013 15.7 19.7 4.3 2 1 1 3 3 2 0 Seryl-tRNA synthetase N-terminal domain DUF4201 PF13870.6 ORF63729 - 0.014 15.1 1.8 0.014 15.1 1.8 3.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4201) RmuC PF02646.16 ORF63729 - 0.02 14.1 0.2 0.02 14.1 0.2 4.2 2 1 1 4 4 4 0 RmuC family HTH_3 PF01381.22 ORF63729 - 0.032 14.3 1.2 0.1 12.6 1.2 1.9 1 0 0 1 1 1 0 Helix-turn-helix DUF3584 PF12128.8 ORF63729 - 0.047 11.2 43.6 0.3 8.6 39.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) Spc7 PF08317.11 ORF63729 - 0.096 11.5 58.4 1.6 7.6 34.7 3.5 2 1 1 3 3 3 0 Spc7 kinetochore protein Phage_GP20 PF06810.11 ORF63729 - 0.15 11.8 55.1 0.53 10.1 17.2 4.5 2 1 2 4 4 4 0 Phage minor structural protein GP20 Fez1 PF06818.15 ORF63729 - 7 7.1 55.4 0.15 12.5 30.4 3.2 1 1 2 3 3 3 0 Fez1 HAUS-augmin3 PF14932.6 ORF63729 - 7.1 6.1 48.4 1.5 8.3 12.4 3.2 2 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 HTH_19 PF12844.7 ORF63729 - 9.7 6.3 11.6 0.22 11.6 3.3 2.6 2 1 0 2 2 2 0 Helix-turn-helix domain Ank_2 PF12796.7 ORF61817 - 2.9e-19 69.4 6.9 7.8e-07 29.6 0.3 3.9 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF61817 - 2.4e-10 39.7 0.9 0.088 13.4 0.0 6.7 7 0 0 7 7 7 2 Ankyrin repeat Ank PF00023.30 ORF61817 - 4.6e-10 39.5 2.5 0.064 13.7 0.0 5.9 6 0 0 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF61817 - 1.5e-09 38.2 1.7 0.18 12.4 0.0 5.1 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF61817 - 3.6e-09 36.7 7.3 0.036 14.4 0.1 5.3 4 1 2 6 6 6 4 Ankyrin repeats (many copies) WD40 PF00400.32 ORF52429 - 5e-07 30.3 3.1 3.4 8.7 0.1 5.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF52429 - 0.002 18.4 0.0 3.9 7.8 0.0 4.2 4 0 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain HOOK PF05622.12 ORF44027 - 0.0011 17.2 31.2 0.0011 17.2 31.2 3.0 2 1 1 3 3 3 2 HOOK protein TMF_DNA_bd PF12329.8 ORF44027 - 0.0023 17.9 19.4 0.0023 17.9 19.4 5.3 2 1 3 5 5 4 1 TATA element modulatory factor 1 DNA binding BLOC1_2 PF10046.9 ORF44027 - 0.0027 18.0 15.0 0.0027 18.0 15.0 5.1 3 1 3 6 6 6 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Seryl_tRNA_N PF02403.22 ORF44027 - 0.013 15.7 19.7 0.013 15.7 19.7 4.2 2 1 1 3 3 2 0 Seryl-tRNA synthetase N-terminal domain HTH_3 PF01381.22 ORF44027 - 0.03 14.4 1.2 0.1 12.6 1.2 2.0 1 0 0 1 1 1 0 Helix-turn-helix Phage_GP20 PF06810.11 ORF44027 - 0.087 12.6 53.0 0.63 9.8 17.5 4.2 2 1 2 4 4 4 0 Phage minor structural protein GP20 Spc7 PF08317.11 ORF44027 - 0.79 8.6 56.9 1.7 7.4 34.6 3.5 2 1 1 3 3 3 0 Spc7 kinetochore protein HrpB7 PF09486.10 ORF44027 - 2.8 8.3 21.2 14 6.0 13.6 3.8 2 1 0 3 3 3 0 Bacterial type III secretion protein (HrpB7) PspA_IM30 PF04012.12 ORF44027 - 4.5 6.8 40.7 3 7.4 26.0 3.0 2 1 1 3 3 3 0 PspA/IM30 family HAUS-augmin3 PF14932.6 ORF44027 - 6 6.4 47.1 2.5 7.6 14.2 3.2 2 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 Fez1 PF06818.15 ORF44027 - 6.4 7.2 51.6 0.023 15.2 26.2 3.1 1 1 1 2 2 1 0 Fez1 ATG16 PF08614.11 ORF44027 - 7.8 6.7 51.2 84 3.3 27.5 3.2 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIVA PF05103.13 ORF44027 - 8.9 6.4 49.1 1.8 8.6 22.2 2.9 2 1 1 3 3 3 0 DivIVA protein TMF_DNA_bd PF12329.8 ORF43009 - 0.0019 18.1 19.1 0.0019 18.1 19.1 5.4 2 1 2 4 4 3 1 TATA element modulatory factor 1 DNA binding BLOC1_2 PF10046.9 ORF43009 - 0.0026 18.0 15.0 0.0026 18.0 15.0 5.3 3 1 3 6 6 6 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 HOOK PF05622.12 ORF43009 - 0.0026 16.0 32.0 0.0026 16.0 32.0 3.0 2 1 1 3 3 3 2 HOOK protein DUF4795 PF16043.5 ORF43009 - 0.0049 16.5 0.8 0.0049 16.5 0.8 4.2 3 1 2 5 5 4 1 Domain of unknown function (DUF4795) Seryl_tRNA_N PF02403.22 ORF43009 - 0.013 15.7 19.7 0.013 15.7 19.7 4.3 2 1 1 3 3 2 0 Seryl-tRNA synthetase N-terminal domain HTH_3 PF01381.22 ORF43009 - 0.032 14.3 1.2 0.1 12.6 1.2 1.9 1 0 0 1 1 1 0 Helix-turn-helix Phage_GP20 PF06810.11 ORF43009 - 0.14 11.9 54.9 0.53 10.1 17.2 4.5 2 1 2 4 4 4 0 Phage minor structural protein GP20 DUF3584 PF12128.8 ORF43009 - 0.17 9.4 43.6 0.3 8.6 39.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) Spc7 PF08317.11 ORF43009 - 0.35 9.7 59.1 1.6 7.6 34.7 3.5 2 1 1 3 3 3 0 Spc7 kinetochore protein HAUS-augmin3 PF14932.6 ORF43009 - 4.6 6.7 48.5 1.5 8.3 12.4 3.3 2 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 DUF4201 PF13870.6 ORF43009 - 6.8 6.4 61.1 0.07 12.9 1.7 3.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4201) Fez1 PF06818.15 ORF43009 - 9.5 6.6 55.4 0.099 13.1 28.7 3.2 1 1 2 3 3 3 0 Fez1 PspA_IM30 PF04012.12 ORF43009 - 9.8 5.7 43.2 3 7.4 26.0 3.3 2 1 1 3 3 3 0 PspA/IM30 family Pkinase PF00069.25 ORF139772 - 3.1e-59 200.5 0.6 3.1e-59 200.5 0.6 2.9 2 2 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF139772 - 1.2e-45 155.8 0.3 1.2e-45 155.8 0.3 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase Kdo PF06293.14 ORF139772 - 0.00051 19.5 1.2 0.0013 18.2 0.0 2.1 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family SHIPPO-rpt PF07004.12 ORF137193 - 4.5e-10 40.0 49.2 0.27 12.2 1.0 12.0 12 0 0 12 12 12 10 Sperm-tail PG-rich repeat Pkinase PF00069.25 ORF123518 - 3.1e-59 200.5 0.6 3.1e-59 200.5 0.6 2.9 2 2 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF123518 - 1.2e-45 155.8 0.3 1.2e-45 155.8 0.3 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase Kdo PF06293.14 ORF123518 - 0.00051 19.5 1.2 0.0013 18.2 0.0 2.1 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Acyl-CoA_dh_M PF02770.19 ORF117357 - 1.4e-14 54.1 0.0 2.3e-14 53.4 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain ACOX PF01756.19 ORF117357 - 1.6e-11 44.1 0.2 3e-11 43.2 0.2 1.5 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_dh_1 PF00441.24 ORF117357 - 4.1e-07 30.3 0.1 4.1e-05 23.8 0.0 2.3 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Suf PF05843.14 ORF117357 - 0.28 11.1 1.3 1.3 8.9 0.3 2.1 2 0 0 2 2 2 0 Suppressor of forked protein (Suf) HOOK PF05622.12 ORF109148 - 0.002 16.4 31.7 0.002 16.4 31.7 3.0 2 1 1 3 3 3 2 HOOK protein BLOC1_2 PF10046.9 ORF109148 - 0.0025 18.1 14.9 0.0025 18.1 14.9 5.4 3 1 3 6 6 6 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_DNA_bd PF12329.8 ORF109148 - 0.01 15.8 21.7 0.01 15.8 21.7 5.5 2 1 2 4 4 3 0 TATA element modulatory factor 1 DNA binding DUF4795 PF16043.5 ORF109148 - 0.01 15.4 0.5 0.01 15.4 0.5 4.2 3 1 1 4 4 4 0 Domain of unknown function (DUF4795) DUF4201 PF13870.6 ORF109148 - 0.014 15.1 1.8 0.014 15.1 1.8 3.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4201) RmuC PF02646.16 ORF109148 - 0.02 14.1 0.2 0.02 14.1 0.2 4.1 2 1 1 4 4 4 0 RmuC family HTH_3 PF01381.22 ORF109148 - 0.02 14.9 1.2 0.065 13.3 1.2 1.9 1 0 0 1 1 1 0 Helix-turn-helix Spc7 PF08317.11 ORF109148 - 0.13 11.1 58.9 2.5 6.9 35.2 3.5 2 1 1 3 3 3 0 Spc7 kinetochore protein Phage_GP20 PF06810.11 ORF109148 - 0.2 11.5 56.4 0.62 9.9 17.4 4.8 2 1 3 5 5 5 0 Phage minor structural protein GP20 DUF3584 PF12128.8 ORF109148 - 0.2 9.1 45.6 1.3 6.4 41.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) Fez1 PF06818.15 ORF109148 - 0.73 10.3 52.2 0.02 15.3 25.9 3.2 2 1 1 3 3 3 0 Fez1 HAUS-augmin3 PF14932.6 ORF109148 - 7.3 6.1 48.7 2.5 7.6 14.8 3.2 2 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 HTH_19 PF12844.7 ORF109148 - 7.3 6.7 11.5 0.16 12.0 3.3 2.6 2 1 0 2 2 2 0 Helix-turn-helix domain APG6_N PF17675.1 ORF109148 - 8.3 7.0 59.5 0.19 12.3 30.6 4.1 1 1 3 4 4 4 0 Apg6 coiled-coil region YyzF PF14116.6 ORF83990 - 0.038 14.0 0.3 0.038 14.0 0.3 2.0 2 0 0 2 2 2 0 YyzF-like protein DUF4116 PF13475.6 ORF64555 - 1.3e-25 88.8 0.0 8e-08 31.9 0.1 5.6 1 1 4 5 5 5 5 Domain of unknown function (DUF4116) KR PF08659.10 ORF64555 - 0.00022 21.2 0.0 0.00095 19.1 0.0 2.1 2 0 0 2 2 2 1 KR domain RIC3 PF15361.6 ORF49598 - 0.036 14.5 0.0 0.036 14.5 0.0 2.9 2 1 0 2 2 2 0 Resistance to inhibitors of cholinesterase homologue 3 Sugarporin_N PF11471.8 ORF49598 - 0.087 12.8 0.1 0.18 11.8 0.1 1.4 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension Occludin_ELL PF07303.13 ORF49598 - 0.093 13.5 5.6 12 6.7 0.0 2.9 2 0 0 2 2 2 0 Occludin homology domain WYL_3 PF18488.1 ORF49598 - 2.3 8.7 9.8 0.21 12.0 0.5 3.1 3 0 0 3 3 3 0 WYL domain YyzF PF14116.6 ORF16826 - 0.038 14.0 0.3 0.038 14.0 0.3 2.0 2 0 0 2 2 2 0 YyzF-like protein YyzF PF14116.6 ORF125411 - 0.038 14.0 0.3 0.038 14.0 0.3 2.1 2 0 0 2 2 2 0 YyzF-like protein EGF PF00008.27 ORF11936 - 0.0056 16.9 8.8 0.0056 16.9 8.8 2.4 2 0 0 2 2 2 1 EGF-like domain EGF_2 PF07974.13 ORF11936 - 0.12 12.8 12.4 0.26 11.7 12.4 1.6 1 0 0 1 1 1 0 EGF-like domain hEGF PF12661.7 ORF11936 - 0.44 11.2 5.7 1.9 9.3 5.7 2.2 1 0 0 1 1 1 0 Human growth factor-like EGF EGF_Tenascin PF18720.1 ORF11936 - 2 8.6 6.9 4 7.6 6.9 1.6 1 0 0 1 1 1 0 Tenascin EGF domain KAP PF05804.12 ORF79756 - 5.3e-88 295.9 5.9 6.6e-88 295.6 5.9 1.0 1 0 0 1 1 1 1 Kinesin-associated protein (KAP) Arm PF00514.23 ORF79756 - 6.7e-07 29.1 10.5 0.033 14.3 0.0 6.6 7 0 0 7 7 7 2 Armadillo/beta-catenin-like repeat Arm_2 PF04826.13 ORF79756 - 0.0003 20.3 10.7 0.027 13.9 1.0 3.7 1 1 2 3 3 3 3 Armadillo-like V-ATPase_H_N PF03224.14 ORF79756 - 0.029 13.7 10.3 0.039 13.2 1.4 3.5 1 1 1 3 3 3 0 V-ATPase subunit H SR-25 PF10500.9 ORF30484 - 0.0033 17.1 6.4 0.0054 16.4 6.4 1.2 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein CDK2AP PF09806.9 ORF30484 - 0.49 10.4 9.2 0.84 9.7 9.2 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein CitMHS PF03600.16 ORF129100 - 4.4e-56 190.3 40.6 1.5e-34 119.6 9.6 2.1 2 0 0 2 2 2 2 Citrate transporter TrkA_C PF02080.21 ORF129100 - 6.2e-26 90.0 1.3 7.2e-13 48.2 0.1 2.3 2 0 0 2 2 2 2 TrkA-C domain Na_sulph_symp PF00939.19 ORF129100 - 2.4e-20 73.0 46.4 1.1e-11 44.5 19.5 3.9 2 2 1 3 3 3 3 Sodium:sulfate symporter transmembrane region DctM PF06808.12 ORF129100 - 7.2e-09 34.9 47.6 2.2e-06 26.7 24.1 2.6 2 1 0 2 2 2 2 Tripartite ATP-independent periplasmic transporter, DctM component LLGL PF08366.13 ORF123905 - 0.018 15.4 0.1 0.053 13.9 0.1 1.8 1 0 0 1 1 1 0 LLGL2 ABC_tran PF00005.27 ORF99192 - 8.7e-34 117.0 0.3 1.4e-32 113.1 0.0 2.6 3 0 0 3 3 3 1 ABC transporter ABC_membrane PF00664.23 ORF99192 - 3.7e-26 92.4 12.4 4.9e-26 92.0 12.4 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF99192 - 1.3e-06 28.1 5.8 0.00078 18.9 0.1 3.6 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 ORF99192 - 0.00033 20.6 0.0 0.00084 19.3 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 ORF99192 - 0.00056 19.7 3.0 0.0068 16.2 0.1 2.7 2 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 ORF99192 - 0.0009 19.8 4.8 0.01 16.4 3.1 2.6 2 1 0 2 2 2 1 AAA domain AAA_21 PF13304.6 ORF99192 - 0.00094 19.1 1.5 0.99 9.1 0.1 3.1 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_24 PF13479.6 ORF99192 - 0.0017 18.1 0.0 0.0036 17.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF99192 - 0.007 16.1 0.0 0.017 14.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 ORF99192 - 0.0084 16.3 0.2 0.19 12.0 0.2 2.6 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit LptE PF04390.12 ORF99192 - 0.016 15.9 0.1 0.11 13.2 0.0 2.2 2 0 0 2 2 2 0 Lipopolysaccharide-assembly AAA PF00004.29 ORF99192 - 0.023 15.1 0.0 0.38 11.2 0.0 2.7 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) ATP-synt_ab PF00006.25 ORF99192 - 0.032 13.9 0.1 0.18 11.4 0.0 2.0 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_16 PF13191.6 ORF99192 - 0.04 14.3 0.0 0.083 13.3 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain Zeta_toxin PF06414.12 ORF59782 - 1.2e-23 83.4 0.0 2e-23 82.7 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 ORF59782 - 8e-10 39.0 0.0 1.4e-09 38.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF59782 - 0.025 15.1 0.0 0.053 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF59782 - 0.047 14.1 0.2 0.14 12.6 0.2 1.9 1 1 0 1 1 1 0 AAA domain ATE_C PF04377.15 ORF55317 - 2.5e-18 67.0 2.4 7.3e-18 65.5 2.4 1.9 1 0 0 1 1 1 1 Arginine-tRNA-protein transferase, C terminus ATE_N PF04376.13 ORF55317 - 5.5e-09 36.3 7.3 5.5e-09 36.3 7.3 2.2 2 0 0 2 2 2 1 Arginine-tRNA-protein transferase, N terminus DNA_topoisoIV PF00521.20 ORF22271 - 3.9e-124 414.8 0.1 5e-124 414.4 0.1 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A COX6A PF02046.15 ORF22271 - 0.043 14.3 0.1 0.097 13.1 0.1 1.5 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa PAPS_reduct PF01507.19 ORF22271 - 0.046 13.8 0.2 0.11 12.5 0.2 1.7 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family XPG_I PF00867.18 ORF18194 - 4.3e-14 52.6 0.2 1.5e-13 50.9 0.2 2.0 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 ORF18194 - 2.8e-09 37.3 0.0 6.8e-09 36.1 0.0 1.7 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I_2 PF12813.7 ORF18194 - 0.047 13.1 1.9 0.076 12.5 0.1 2.0 2 0 0 2 2 2 0 XPG domain containing TDRP PF15683.5 ORF18194 - 0.32 11.0 10.5 0.032 14.2 5.1 2.0 2 0 0 2 2 2 0 Testis development-related protein DNA_topoisoIV PF00521.20 ORF115082 - 3.9e-124 414.8 0.1 5e-124 414.4 0.1 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A COX6A PF02046.15 ORF115082 - 0.043 14.3 0.1 0.097 13.1 0.1 1.5 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa PAPS_reduct PF01507.19 ORF115082 - 0.046 13.8 0.2 0.11 12.5 0.2 1.7 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family DHHC PF01529.20 ORF94009 - 7.6e-32 110.2 13.8 7.6e-32 110.2 13.8 2.5 2 0 0 2 2 2 1 DHHC palmitoyltransferase Ank_2 PF12796.7 ORF94009 - 4.8e-25 88.0 2.9 4.1e-13 49.7 0.0 4.1 2 1 3 5 5 5 4 Ankyrin repeats (3 copies) Ank PF00023.30 ORF94009 - 3.9e-24 84.0 3.0 1.1e-05 25.6 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 ORF94009 - 4.3e-21 72.7 3.3 0.00011 22.3 0.0 6.8 6 0 0 6 6 6 4 Ankyrin repeat Ank_4 PF13637.6 ORF94009 - 1.5e-20 73.2 3.2 1.2e-10 41.6 0.0 5.0 2 1 3 5 5 5 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF94009 - 2.8e-20 72.1 2.9 2.6e-09 37.1 0.2 6.3 4 1 2 6 6 6 3 Ankyrin repeats (many copies) EI24 PF07264.11 ORF94009 - 0.0056 16.9 2.0 0.054 13.7 0.3 2.2 2 0 0 2 2 2 1 Etoposide-induced protein 2.4 (EI24) Baculo_11_kDa PF06143.11 ORF94009 - 1.1 8.8 0.0 1.1 8.8 0.0 3.4 3 0 0 3 3 3 0 Baculovirus 11 kDa family TPR_10 PF13374.6 ORF79035 - 4.2e-66 217.2 32.3 7e-12 44.8 0.5 8.1 7 1 0 7 7 7 7 Tetratricopeptide repeat TPR_12 PF13424.6 ORF79035 - 3.2e-57 190.7 44.7 1.3e-17 63.8 4.4 6.2 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF79035 - 1.7e-11 44.1 4.6 5.4e-08 32.6 0.7 2.3 1 1 1 2 2 2 2 MalT-like TPR region TPR_7 PF13176.6 ORF79035 - 1.3e-10 40.5 19.1 0.098 12.7 0.4 6.1 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF79035 - 3.7e-10 39.2 15.7 0.091 12.6 0.5 6.2 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF79035 - 7.1e-09 36.2 19.0 0.0014 19.3 3.8 5.5 3 2 1 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF79035 - 1.4e-06 28.0 22.2 0.2 11.9 0.9 6.5 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF79035 - 1e-05 25.9 21.4 0.25 12.3 0.5 6.4 4 2 2 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF79035 - 6.8e-05 22.8 16.0 0.038 14.2 0.1 6.2 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF79035 - 9.2e-05 22.6 15.3 0.38 11.3 0.1 6.4 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF79035 - 9.6e-05 22.7 25.4 0.048 14.3 0.1 6.7 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF79035 - 0.0016 18.9 17.4 0.037 14.5 0.8 4.5 2 1 1 4 4 4 2 Tetratricopeptide repeat TPR_3 PF07720.12 ORF79035 - 0.0037 17.2 0.0 0.73 9.9 0.0 3.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_5 PF12688.7 ORF79035 - 0.053 13.8 7.1 4.3 7.6 0.1 4.2 2 2 0 3 3 3 0 Tetratrico peptide repeat PPR PF01535.20 ORF79035 - 0.058 13.7 0.5 1.1e+02 3.4 0.0 4.2 4 0 0 4 4 4 0 PPR repeat DUF1571 PF07608.11 ORF79035 - 0.1 12.0 0.0 6 6.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1571) Osmo_CC PF08946.10 ORF79035 - 0.17 12.1 0.2 1.6e+02 2.7 0.0 4.0 4 0 0 4 4 4 0 Osmosensory transporter coiled coil zf-RING_2 PF13639.6 ORF63818 - 4.9e-08 33.2 9.7 2e-07 31.2 2.6 2.9 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF63818 - 2.9e-06 27.0 2.7 2.9e-06 27.0 2.7 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF63818 - 4.2e-06 26.9 7.8 4.2e-06 26.9 7.8 2.6 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF63818 - 0.00014 21.6 1.3 0.00014 21.6 1.3 3.0 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF63818 - 0.00026 20.8 7.7 0.0014 18.5 7.7 2.3 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF63818 - 0.00046 20.0 0.6 0.00046 20.0 0.6 2.3 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 ORF63818 - 0.00078 19.1 3.6 0.034 13.9 0.1 2.7 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF63818 - 0.0022 17.9 9.6 0.019 14.9 9.8 2.4 1 1 1 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF63818 - 0.023 14.7 4.2 0.099 12.7 4.2 2.2 1 1 0 1 1 1 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF63818 - 0.052 13.6 0.5 0.15 12.1 0.5 1.8 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF63818 - 1.9 8.7 9.1 2 8.7 4.3 2.9 2 1 0 2 2 2 0 FANCL C-terminal domain Oxidored_q4 PF00507.19 ORF63818 - 3.7 7.8 7.7 3.8 7.7 1.0 3.5 2 1 1 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 zf-RING_2 PF13639.6 ORF57858 - 4.9e-08 33.2 9.7 2e-07 31.2 2.6 2.9 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF57858 - 2.9e-06 27.0 2.7 2.9e-06 27.0 2.7 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF57858 - 4.2e-06 26.9 7.8 4.2e-06 26.9 7.8 2.6 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF57858 - 0.00014 21.6 1.3 0.00014 21.6 1.3 3.0 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF57858 - 0.00026 20.8 7.7 0.0014 18.5 7.7 2.3 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF57858 - 0.00046 20.0 0.6 0.00046 20.0 0.6 2.3 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 ORF57858 - 0.00078 19.1 3.6 0.034 13.9 0.1 2.7 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF57858 - 0.0022 17.9 9.6 0.019 14.9 9.8 2.4 1 1 1 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF57858 - 0.023 14.7 4.2 0.099 12.7 4.2 2.2 1 1 0 1 1 1 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF57858 - 0.052 13.6 0.5 0.15 12.1 0.5 1.8 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF57858 - 1.9 8.7 9.1 2 8.7 4.3 2.9 2 1 0 2 2 2 0 FANCL C-terminal domain Oxidored_q4 PF00507.19 ORF57858 - 3.7 7.8 7.7 3.8 7.7 1.0 3.5 2 1 1 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Amidase PF01425.21 ORF37456 - 1.5e-77 261.5 0.0 1.9e-77 261.1 0.0 1.2 1 0 0 1 1 1 1 Amidase DHHC PF01529.20 ORF24161 - 7.6e-32 110.2 13.8 7.6e-32 110.2 13.8 2.5 2 0 0 2 2 2 1 DHHC palmitoyltransferase Ank_2 PF12796.7 ORF24161 - 4.8e-25 88.0 2.9 4.1e-13 49.7 0.0 4.1 2 1 3 5 5 5 4 Ankyrin repeats (3 copies) Ank PF00023.30 ORF24161 - 3.9e-24 84.0 3.0 1.1e-05 25.6 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 ORF24161 - 4.3e-21 72.7 3.3 0.00011 22.3 0.0 6.8 6 0 0 6 6 6 4 Ankyrin repeat Ank_4 PF13637.6 ORF24161 - 1.5e-20 73.2 3.2 1.2e-10 41.6 0.0 5.0 2 1 3 5 5 5 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF24161 - 2.8e-20 72.1 2.9 2.6e-09 37.1 0.2 6.3 4 1 2 6 6 6 3 Ankyrin repeats (many copies) EI24 PF07264.11 ORF24161 - 0.0056 16.9 2.0 0.054 13.7 0.3 2.2 2 0 0 2 2 2 1 Etoposide-induced protein 2.4 (EI24) Baculo_11_kDa PF06143.11 ORF24161 - 1.1 8.8 0.0 1.1 8.8 0.0 3.4 3 0 0 3 3 3 0 Baculovirus 11 kDa family zf-RING_2 PF13639.6 ORF133964 - 4.9e-08 33.2 9.7 2e-07 31.2 2.6 2.9 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF133964 - 2.9e-06 27.0 2.7 2.9e-06 27.0 2.7 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF133964 - 4.2e-06 26.9 7.8 4.2e-06 26.9 7.8 2.6 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF133964 - 0.00014 21.6 1.3 0.00014 21.6 1.3 3.0 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF133964 - 0.00026 20.8 7.7 0.0014 18.5 7.7 2.3 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF133964 - 0.00046 20.0 0.6 0.00046 20.0 0.6 2.3 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 ORF133964 - 0.00078 19.1 3.6 0.034 13.9 0.1 2.7 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF133964 - 0.0022 17.9 9.6 0.019 14.9 9.8 2.4 1 1 1 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF133964 - 0.023 14.7 4.2 0.099 12.7 4.2 2.2 1 1 0 1 1 1 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF133964 - 0.052 13.6 0.5 0.15 12.1 0.5 1.8 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF133964 - 1.9 8.7 9.1 2 8.7 4.3 2.9 2 1 0 2 2 2 0 FANCL C-terminal domain Oxidored_q4 PF00507.19 ORF133964 - 3.7 7.8 7.7 3.8 7.7 1.0 3.5 2 1 1 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Elongin_A PF06881.11 ORF124338 - 0.43 11.1 0.1 0.43 11.1 0.1 2.8 3 0 0 3 3 3 0 RNA polymerase II transcription factor SIII (Elongin) subunit A Amidase PF01425.21 ORF11447 - 6.3e-78 262.7 0.0 8.2e-78 262.4 0.0 1.1 1 0 0 1 1 1 1 Amidase DUF4407 PF14362.6 ORF113371 - 1 8.7 39.2 0.24 10.7 21.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Col_cuticle_N PF01484.17 ORF113371 - 1.5 8.9 4.0 32 4.7 0.1 3.6 2 1 1 3 3 3 0 Nematode cuticle collagen N-terminal domain TPR_MLP1_2 PF07926.12 ORF113371 - 2.1 8.4 53.0 4.1 7.5 27.9 4.4 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein DHQ_synthase PF01761.20 ORF9071 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF9071 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF9071 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain NMD3 PF04981.13 ORF85992 - 3.1e-68 229.8 8.7 3.1e-68 229.8 8.7 1.9 2 0 0 2 2 2 1 NMD3 family zf-RING_12 PF17976.1 ORF85992 - 0.077 13.3 1.0 11 6.3 0.1 2.9 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain Nif11 PF07862.11 ORF85992 - 0.11 12.8 0.2 0.36 11.2 0.2 1.9 1 0 0 1 1 1 0 Nif11 domain IMS PF00817.20 ORF85992 - 0.17 11.9 0.8 1.7 8.6 0.1 2.4 2 0 0 2 2 2 0 impB/mucB/samB family TackOD1 PF18551.1 ORF85992 - 0.26 10.9 6.3 2.7 7.6 4.0 3.0 2 1 0 2 2 2 0 Thaumarchaeal output domain 1 Kinesin PF00225.23 ORF67170 - 2e-92 309.7 2.3 2e-92 309.7 2.3 1.6 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF67170 - 2.9e-18 66.2 8.4 2.8e-14 53.3 0.2 3.4 3 1 1 4 4 4 2 Microtubule binding TEX12 PF15219.6 ORF67170 - 0.074 13.4 2.0 4.4 7.7 0.1 3.0 3 0 0 3 3 3 0 Testis-expressed 12 SHIPPO-rpt PF07004.12 ORF44241 - 1.6e-06 28.7 47.6 0.67 11.0 0.1 10.7 11 0 0 11 11 11 7 Sperm-tail PG-rich repeat PAN_2 PF08276.11 ORF41914 - 0.014 15.5 1.3 0.051 13.7 1.3 2.0 1 0 0 1 1 1 0 PAN-like domain Fur_reg_FbpB PF13040.6 ORF41914 - 0.023 14.2 1.1 0.06 12.9 0.3 2.2 2 0 0 2 2 2 0 Fur-regulated basic protein B Metallophos_2 PF12850.7 ORF41914 - 0.32 11.2 1.8 2 8.6 1.8 2.3 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain DHQ_synthase PF01761.20 ORF40457 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF40457 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF40457 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain DHQ_synthase PF01761.20 ORF19635 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF19635 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF19635 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain NCBP3 PF10309.9 ORF141139 - 4.8e-12 45.5 0.0 9.3e-12 44.6 0.0 1.4 1 0 0 1 1 1 1 Nuclear cap-binding protein subunit 3 tRNA_edit PF04073.15 ORF141139 - 0.00015 21.9 0.0 0.00031 20.8 0.0 1.4 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain CIAPIN1 PF05093.13 ORF141139 - 0.076 13.5 0.3 0.52 10.9 0.0 2.5 2 0 0 2 2 2 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis ATP-synt_ab PF00006.25 ORF120569 - 2.4e-103 344.4 0.0 3.5e-103 343.8 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 ORF120569 - 7e-41 138.9 0.0 1.2e-40 138.1 0.0 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 ORF120569 - 4.8e-15 55.8 0.1 4.8e-15 55.8 0.1 2.0 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain ATP-synt_I PF03899.15 ORF118717 - 0.028 14.8 1.6 2.2 8.7 0.3 2.3 2 0 0 2 2 2 0 ATP synthase I chain Bestrophin PF01062.21 ORF118717 - 0.056 12.8 0.5 0.12 11.8 0.5 1.6 1 1 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel DHQ_synthase PF01761.20 ORF103671 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF103671 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF103671 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain DHQ_synthase PF01761.20 ORF10329 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF10329 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF10329 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain DHQ_synthase PF01761.20 ORF100663 - 8.2e-37 126.8 0.0 1.4e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 ORF100663 - 5.3e-06 26.3 0.0 1.3e-05 25.0 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase SHOCT PF09851.9 ORF100663 - 0.0003 20.4 3.4 0.00076 19.1 3.4 1.8 1 0 0 1 1 1 1 Short C-terminal domain PEP-utilizers_C PF02896.18 ORF8852 - 5.5e-90 301.4 0.1 6.9e-90 301.1 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF8852 - 7.8e-26 89.6 4.0 7.8e-26 89.6 4.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPDK_N PF01326.19 ORF8852 - 6.1e-12 45.4 0.1 9.9e-12 44.8 0.1 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MipA PF06629.12 ORF8852 - 0.19 12.0 0.0 0.34 11.1 0.0 1.4 1 0 0 1 1 1 0 MltA-interacting protein MipA Nucleopor_Nup85 PF07575.13 ORF74994 - 1.3e-17 63.6 0.0 3e-17 62.4 0.0 1.5 1 1 0 1 1 1 1 Nup85 Nucleoporin PEP-utilizers_C PF02896.18 ORF23215 - 5.5e-90 301.4 0.1 6.9e-90 301.1 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF23215 - 7.8e-26 89.6 4.0 7.8e-26 89.6 4.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPDK_N PF01326.19 ORF23215 - 6.1e-12 45.4 0.1 9.9e-12 44.8 0.1 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MipA PF06629.12 ORF23215 - 0.19 12.0 0.0 0.34 11.1 0.0 1.4 1 0 0 1 1 1 0 MltA-interacting protein MipA FYVE PF01363.21 ORF20825 - 1.9e-06 27.9 8.1 4.4e-06 26.7 8.1 1.6 1 0 0 1 1 1 1 FYVE zinc finger FH2 PF02181.23 ORF20825 - 0.0016 17.6 0.1 0.0027 16.9 0.1 1.2 1 0 0 1 1 1 1 Formin Homology 2 Domain PEP-utilizers_C PF02896.18 ORF151970 - 5.5e-90 301.4 0.1 6.9e-90 301.1 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF151970 - 7.8e-26 89.6 4.0 7.8e-26 89.6 4.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPDK_N PF01326.19 ORF151970 - 6.1e-12 45.4 0.1 9.9e-12 44.8 0.1 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MipA PF06629.12 ORF151970 - 0.19 12.0 0.0 0.34 11.1 0.0 1.4 1 0 0 1 1 1 0 MltA-interacting protein MipA Sulfatase PF00884.23 ORF134975 - 5.7e-54 183.6 0.2 7.2e-54 183.3 0.2 1.1 1 0 0 1 1 1 1 Sulfatase EptA_B_N PF08019.12 ORF134975 - 6.8e-43 146.2 9.5 6.8e-43 146.2 9.5 1.7 2 0 0 2 2 2 1 Phosphoethanolamine transferase EptA/EptB Rhomboid PF01694.22 ORF134975 - 0.37 10.8 5.9 0.71 9.9 5.9 1.5 1 0 0 1 1 1 0 Rhomboid family SBF2 PF12335.8 ORF134402 - 1.3e-05 24.9 0.2 1.3e-05 24.9 0.2 2.1 2 0 0 2 2 2 1 Myotubularin protein SF3A3 PF16837.5 ORF134402 - 0.63 10.6 8.2 21 5.7 0.0 3.3 3 0 0 3 3 3 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 Presenilin PF01080.17 ORF134402 - 0.8 8.4 6.0 1.3 7.7 6.0 1.3 1 0 0 1 1 1 0 Presenilin PEP-utilizers_C PF02896.18 ORF12763 - 5.5e-90 301.4 0.1 6.9e-90 301.1 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF12763 - 7.8e-26 89.6 4.0 7.8e-26 89.6 4.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain PPDK_N PF01326.19 ORF12763 - 6.1e-12 45.4 0.1 9.9e-12 44.8 0.1 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MipA PF06629.12 ORF12763 - 0.19 12.0 0.0 0.34 11.1 0.0 1.4 1 0 0 1 1 1 0 MltA-interacting protein MipA Ion_trans PF00520.31 ORF118207 - 8e-26 90.8 8.7 1e-25 90.4 8.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF118207 - 0.0014 18.4 1.7 0.015 15.2 0.4 3.2 3 0 0 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 ORF118207 - 0.013 16.0 0.9 0.17 12.4 0.2 2.5 2 1 1 3 3 3 0 EF-hand domain pair DUF485 PF04341.12 ORF118207 - 0.062 13.2 2.5 5.9 6.9 1.4 2.6 2 0 0 2 2 2 0 Protein of unknown function, DUF485 EF-hand_1 PF00036.32 ORF118207 - 0.086 12.4 0.1 0.086 12.4 0.1 2.5 3 0 0 3 3 3 0 EF hand DUF1700 PF08006.11 ORF118207 - 0.24 10.9 2.1 4.2 6.9 1.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) Imm40 PF15569.6 ORF107583 - 0.017 15.2 1.6 0.054 13.6 0.1 2.6 3 0 0 3 3 3 0 Immunity protein 40 Peptidase_S10 PF00450.22 ORF91268 - 1.6e-69 235.4 2.0 3.8e-69 234.1 2.0 1.6 1 1 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF91268 - 0.00059 20.1 13.4 0.00059 20.1 13.4 2.2 1 1 1 2 2 2 1 EGF-like domain EGF_Tenascin PF18720.1 ORF91268 - 0.6 10.2 5.8 0.62 10.2 3.8 2.1 2 0 0 2 2 2 0 Tenascin EGF domain SIT PF15330.6 ORF52236 - 0.0011 19.4 5.1 0.083 13.3 0.1 3.2 3 0 0 3 3 3 2 SHP2-interacting transmembrane adaptor protein, SIT VSP PF03302.13 ORF52236 - 0.0089 14.9 5.3 0.013 14.3 5.3 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein Ig_C17orf99 PF17736.1 ORF52236 - 0.02 14.9 0.3 0.064 13.3 0.3 1.8 1 0 0 1 1 1 0 C17orf99 Ig domain DUF4834 PF16118.5 ORF52236 - 0.23 12.4 0.1 0.23 12.4 0.1 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) Cadherin_C_2 PF16492.5 ORF52236 - 0.5 11.1 6.0 2.1 9.2 0.2 3.2 3 0 0 3 3 3 0 Cadherin cytoplasmic C-terminal Hum_adeno_E3A PF05393.11 ORF52236 - 0.92 9.5 4.6 0.7 9.9 1.4 2.5 2 0 0 2 2 2 0 Human adenovirus early E3A glycoprotein Renin_r PF07850.14 ORF52236 - 6.7 7.4 12.1 4.2 8.0 3.3 4.0 4 1 0 4 4 4 0 Renin receptor-like protein HemY_N PF07219.13 ORF52236 - 10 6.4 6.9 26 5.1 0.0 3.5 4 0 0 4 4 4 0 HemY protein N-terminus DUF4215 PF13948.6 ORF50282 - 5.7e-09 36.3 29.9 7.3e-06 26.3 12.8 3.9 4 0 0 4 4 4 2 Domain of unknown function (DUF4215) DUF3827 PF12877.7 ORF50282 - 0.16 10.3 0.3 0.26 9.6 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) ZZ PF00569.17 ORF50282 - 0.21 11.5 8.7 3 7.7 0.2 3.0 2 0 0 2 2 2 0 Zinc finger, ZZ type HhH-GPD PF00730.25 ORF32881 - 2.8e-10 40.6 0.0 7.2e-10 39.3 0.0 1.7 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein YkyA PF10368.9 ORF32235 - 0.036 13.7 0.2 0.036 13.7 0.2 2.3 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein DUF5588 PF17826.1 ORF32235 - 0.16 10.8 0.1 0.33 9.8 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5588) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks12.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks12.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks12.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks12.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:01:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ion_trans_2 PF07885.16 ORF132625 - 2.1e-13 50.0 1.7 3.1e-13 49.5 1.7 1.2 1 0 0 1 1 1 1 Ion channel EF-hand_7 PF13499.6 ORF132625 - 3.4e-11 43.4 2.6 4.3e-08 33.5 0.5 1.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF132625 - 3.5e-10 39.6 0.4 0.0003 20.6 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF132625 - 3.6e-10 38.7 1.5 0.00063 19.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF132625 - 1.5e-09 36.9 0.8 0.00051 19.4 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF132625 - 4.2e-09 35.6 0.3 0.00089 19.0 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain Lig_chan PF00060.26 ORF132625 - 0.0058 16.5 0.0 0.0078 16.1 0.0 1.1 1 0 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF132625 - 0.012 14.8 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 Ion transport protein DUF1854 PF08909.11 ORF13225 - 0.12 12.2 0.7 0.23 11.3 0.3 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1854) Transposase_31 PF04754.12 ORF132157 - 1.3e-28 100.0 0.0 2e-28 99.4 0.0 1.3 1 0 0 1 1 1 1 Putative transposase, YhgA-like Arf PF00025.21 ORF130017 - 2e-54 183.7 0.0 2.2e-54 183.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF130017 - 5.6e-12 45.9 0.0 7.1e-12 45.6 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF130017 - 5.4e-10 39.1 0.0 5.7e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF130017 - 3e-09 36.6 0.0 4.1e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF130017 - 1.9e-07 30.6 0.2 0.0027 16.9 0.0 2.3 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 ORF130017 - 1.1e-06 28.7 0.0 1.5e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF130017 - 1.4e-06 27.9 0.0 1.8e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region cobW PF02492.19 ORF130017 - 0.00051 19.7 0.3 0.055 13.1 0.1 2.1 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain GTP_EFTU PF00009.27 ORF130017 - 0.0011 18.5 0.1 0.069 12.7 0.0 2.1 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain PduV-EutP PF10662.9 ORF130017 - 0.0044 16.8 0.1 0.037 13.8 0.1 2.1 2 1 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF130017 - 0.03 14.2 0.0 6.6 6.6 0.1 2.1 2 0 0 2 2 2 0 RsgA GTPase MeaB PF03308.16 ORF130017 - 0.054 12.5 0.3 4.2 6.3 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 ORF130017 - 0.057 14.0 0.8 0.1 13.1 0.7 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF130017 - 0.065 13.5 0.6 0.18 12.1 0.6 1.8 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF130017 - 0.067 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 ORF130017 - 0.07 13.1 0.5 1.8 8.4 0.2 2.1 2 0 0 2 2 2 0 NACHT domain NTP_transf_2 PF01909.23 ORF130017 - 0.079 13.3 0.2 0.13 12.6 0.2 1.3 1 0 0 1 1 1 0 Nucleotidyltransferase domain SRP54 PF00448.22 ORF130017 - 0.088 12.4 0.2 0.15 11.7 0.2 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 ORF130017 - 0.089 13.2 0.4 0.67 10.3 0.1 2.0 2 0 0 2 2 2 0 AAA ATPase domain TrwB_AAD_bind PF10412.9 ORF130017 - 0.092 11.6 0.3 0.13 11.1 0.3 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_7 PF12775.7 ORF130017 - 0.13 11.8 0.1 0.19 11.2 0.1 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 ORF130017 - 0.13 12.2 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 ORF130017 - 0.17 12.1 0.4 0.2 11.8 0.4 1.5 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF130017 - 0.22 11.3 0.3 1.2 8.8 0.1 1.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Mg_chelatase PF01078.21 ORF130017 - 0.22 10.9 0.2 0.36 10.2 0.2 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI UQ_con PF00179.26 ORF12571 - 5.6e-38 129.8 0.1 7.1e-38 129.4 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF12571 - 0.0066 16.2 0.0 0.013 15.2 0.0 1.6 1 1 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF12571 - 0.075 13.3 0.8 0.1 12.9 0.8 1.4 1 1 0 1 1 1 0 RWD domain Casc1 PF12366.8 ORF12571 - 0.2 11.1 0.8 0.54 9.7 0.8 1.6 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 RRM_1 PF00076.22 ORF125658 - 4.3e-08 32.9 0.1 9.7e-08 31.7 0.1 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Neogenin_C PF06583.12 ORF125552 - 0.14 11.9 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Neogenin C-terminus PITH PF06201.13 ORF125345 - 9.1e-29 100.6 0.1 1.1e-28 100.4 0.1 1.1 1 0 0 1 1 1 1 PITH domain RCC1_2 PF13540.6 ORF117943 - 0.026 14.3 3.1 0.091 12.6 3.1 2.0 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat DUF4516 PF14990.6 ORF117943 - 0.17 11.7 1.3 0.54 10.0 1.3 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) DUF2826 PF11442.8 ORF116203 - 0.028 14.2 0.5 0.04 13.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2826) Circo_capsid PF02443.15 ORF115667 - 0.19 11.3 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 Circovirus capsid protein B-block_TFIIIC PF04182.12 ORF111929 - 0.16 12.1 0.0 0.33 11.2 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Endostatin PF06482.11 ORF110389 - 0.86 9.0 4.5 1 8.7 4.5 1.1 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin RPA43_OB PF17875.1 ORF107669 - 0.14 12.8 0.3 0.25 12.0 0.0 1.5 2 0 0 2 2 2 0 RPA43 OB domain in RNA Pol I SlyX PF04102.12 ORF107549 - 0.012 16.2 0.2 0.05 14.2 0.0 2.2 3 0 0 3 3 3 0 SlyX Fib_alpha PF08702.10 ORF107549 - 0.015 15.5 2.9 0.015 15.5 2.9 1.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Aminotran_1_2 PF00155.21 ORF107549 - 0.02 14.1 0.1 0.044 12.9 0.0 1.5 2 0 0 2 2 2 0 Aminotransferase class I and II NotI PF12183.8 ORF107549 - 0.02 14.2 0.3 0.028 13.8 0.3 1.2 1 0 0 1 1 1 0 Restriction endonuclease NotI V_ATPase_I PF01496.19 ORF107549 - 0.046 11.7 6.4 0.053 11.5 6.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CcdA PF07362.12 ORF107549 - 0.068 13.6 1.5 4.2 7.9 0.0 3.2 2 1 0 3 3 3 0 Post-segregation antitoxin CcdA ArAE_2_N PF10337.9 ORF107549 - 0.084 11.9 0.8 0.11 11.5 0.8 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal YtxH PF12732.7 ORF107549 - 0.17 12.4 1.5 12 6.5 0.3 2.4 2 1 0 2 2 2 0 YtxH-like protein PB1 PF00564.24 ORF107549 - 0.19 11.7 4.3 0.2 11.6 0.3 2.6 3 0 0 3 3 3 0 PB1 domain DOT1 PF08123.13 ORF106628 - 1e-07 31.7 0.0 5.1e-06 26.2 0.0 2.1 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_2 PF00891.18 ORF106628 - 3.5e-05 23.2 0.0 4.8e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_11 PF08241.12 ORF106628 - 0.00042 20.9 0.0 0.00064 20.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF106628 - 0.0012 19.5 0.0 0.002 18.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF106628 - 0.0017 17.9 0.0 0.0023 17.4 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_31 PF13847.6 ORF106628 - 0.0023 17.8 0.0 0.0027 17.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF106628 - 0.06 14.1 0.0 0.088 13.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain dCMP_cyt_deam_1 PF00383.23 ORF104582 - 1.8 8.5 9.1 0.81 9.6 1.8 2.5 1 1 1 2 2 2 0 Cytidine and deoxycytidylate deaminase zinc-binding region IMPDH PF00478.25 ORF101156 - 6.1e-06 25.5 0.0 8e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain Pap_E4 PF02711.14 ORF10069 - 0.93 10.5 0.1 0.93 10.5 0.1 2.6 2 1 0 2 2 2 0 E4 protein Cu_amine_oxid PF01179.20 NODE_38294_length_553_cov_2.245174_g30981_i0forward_frame_1 - 0.02 13.8 1.3 0.025 13.5 1.0 1.2 1 1 0 1 1 1 0 Copper amine oxidase, enzyme domain ADK PF00406.22 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 5.6e-21 75.2 0.7 2.9e-14 53.4 0.1 2.1 2 0 0 2 2 2 2 Adenylate kinase AAA_33 PF13671.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 2.1e-09 37.7 0.0 4.3e-06 26.9 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_17 PF13207.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 4.6e-09 36.8 2.7 2.6e-06 27.9 0.1 2.6 2 1 1 3 3 3 2 AAA domain AAA PF00004.29 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 2.5e-06 28.0 0.2 7.5e-06 26.4 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.00048 19.9 0.8 0.2 11.3 0.0 2.2 2 0 0 2 2 2 2 Thymidylate kinase AAA_16 PF13191.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0011 19.4 0.0 0.0028 18.0 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_19 PF13245.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0019 18.6 0.0 0.0037 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0019 18.7 0.3 0.016 15.7 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_24 PF13479.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0022 17.8 0.1 0.0034 17.1 0.1 1.4 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0027 17.0 0.0 0.0045 16.3 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin AAA_5 PF07728.14 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0032 17.5 0.4 0.056 13.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0038 17.0 0.0 0.0054 16.5 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0044 17.3 0.1 0.011 16.1 0.0 1.7 1 1 1 2 2 2 1 AAA domain ABC_tran PF00005.27 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.0051 17.3 0.1 0.011 16.3 0.1 1.5 1 0 0 1 1 1 1 ABC transporter Mg_chelatase PF01078.21 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.011 15.1 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI G-alpha PF00503.20 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.014 14.6 0.1 0.018 14.2 0.1 1.2 1 0 0 1 1 1 0 G-protein alpha subunit KTI12 PF08433.10 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.014 14.8 0.0 0.024 14.1 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 NACHT PF05729.12 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.026 14.4 0.1 0.053 13.4 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_28 PF13521.6 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.034 14.4 0.0 0.12 12.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.034 14.2 0.0 0.063 13.3 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NTPase_1 PF03266.15 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.036 14.0 1.8 0.069 13.1 0.1 2.0 2 0 0 2 2 2 0 NTPase AAA_10 PF12846.7 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.042 12.8 0.4 0.23 10.4 0.1 1.9 1 1 1 2 2 2 0 AAA-like domain Hydin_ADK PF17213.3 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.05 13.9 0.5 0.3 11.4 0.0 2.1 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain TrwB_AAD_bind PF10412.9 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.09 11.7 0.0 0.16 10.9 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain RNA_helicase PF00910.22 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.1 13.0 0.1 0.22 11.9 0.1 1.6 1 0 0 1 1 1 0 RNA helicase CPT PF07931.12 NODE_38286_length_553_cov_3.550193_g30973_i0reverse_frame_1 - 0.14 12.0 0.1 0.32 10.8 0.0 1.5 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein DUF1658 PF07871.11 NODE_38283_length_553_cov_4.832046_g30970_i0forward_frame_1 - 0.12 12.3 2.0 0.31 11.1 2.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1658) Ank_4 PF13637.6 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 6.5e-23 80.8 1.6 8.2e-09 35.8 0.1 2.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 3.6e-20 72.3 1.1 2.8e-15 56.7 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 3.2e-15 54.7 0.6 0.00062 20.0 0.0 4.6 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 3.1e-12 46.4 3.6 0.0019 18.5 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 NODE_38258_length_553_cov_148.395753_g30946_i0forward_frame_1 - 6.4e-11 42.3 8.2 3e-05 24.2 0.4 3.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ribosomal_L6 PF00347.23 NODE_38256_length_553_cov_183.874517_g30944_i0forward_frame_1 - 2.4e-14 53.8 0.0 4.5e-09 36.9 0.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 GST_C_6 PF17171.4 NODE_38139_length_555_cov_3033.426923_g4420_i3forward_frame_1 - 0.11 12.3 0.1 0.48 10.3 0.0 2.1 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Voltage_CLC PF00654.20 NODE_38136_length_556_cov_2.408829_g30837_i0reverse_frame_2 - 2.1e-15 56.8 0.4 2.1e-15 56.8 0.4 2.0 1 1 1 2 2 2 2 Voltage gated chloride channel Cupin_1 PF00190.22 NODE_38136_length_556_cov_2.408829_g30837_i0forward_frame_3 - 0.18 11.4 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 Cupin NPM1-C PF16276.5 NODE_38133_length_556_cov_2.859885_g30834_i0forward_frame_2 - 0.045 13.7 0.3 0.12 12.4 0.0 1.8 2 0 0 2 2 2 0 Nucleophosmin C-terminal domain MFS_1 PF07690.16 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 1.8e-11 43.6 11.0 2.6e-11 43.1 11.0 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 8.5e-07 28.2 6.4 1.2e-06 27.7 6.4 1.2 1 0 0 1 1 1 1 MFS_1 like family Nuc_H_symport PF03825.16 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 4.9e-06 25.8 3.3 6.1e-06 25.5 3.3 1.1 1 0 0 1 1 1 1 Nucleoside H+ symporter LacY_symp PF01306.19 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 0.0047 15.8 3.0 0.0047 15.8 3.0 1.4 1 1 0 1 1 1 1 LacY proton/sugar symporter YibE_F PF07907.11 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 1.5 8.2 15.0 0.44 10.0 5.7 2.2 2 0 0 2 2 2 0 YibE/F-like protein SdpI PF13630.6 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_3 - 9 6.5 9.7 2.6 8.3 4.3 2.2 2 0 0 2 2 2 0 SdpI/YhfL protein family Ntox25 PF15530.6 NODE_38132_length_556_cov_2.894434_g30833_i0reverse_frame_2 - 0.091 12.9 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial toxin 25 Macro PF01661.21 NODE_38130_length_556_cov_3.303263_g30831_i0forward_frame_3 - 3.8e-06 26.9 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Macro domain Hid1 PF12722.7 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 3.4e-20 71.8 3.2 3.8e-20 71.7 3.2 1.0 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein Dymeclin PF09742.9 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 3.2e-11 42.4 0.1 4.4e-11 41.9 0.1 1.2 1 0 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein SLC12 PF03522.15 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 0.044 12.8 4.4 0.063 12.3 4.4 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Presenilin PF01080.17 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 1.1 7.9 8.1 1.3 7.7 8.1 1.2 1 0 0 1 1 1 0 Presenilin AUX_IAA PF02309.16 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 1.3 8.9 7.5 1.7 8.5 0.0 2.1 2 0 0 2 2 2 0 AUX/IAA family CDC45 PF02724.14 NODE_38119_length_556_cov_91.689060_g30821_i0forward_frame_2 - 7.2 4.8 10.4 8.6 4.5 10.4 1.1 1 0 0 1 1 1 0 CDC45-like protein Med3 PF11593.8 NODE_38113_length_556_cov_99.625720_g30815_i0forward_frame_2 - 4.7 6.3 12.8 4.6 6.3 12.0 1.3 1 1 0 1 1 1 0 Mediator complex subunit 3 fungal IMUP PF15761.5 NODE_38100_length_556_cov_151.598848_g30804_i0forward_frame_3 - 0.29 11.8 13.4 0.13 13.0 9.6 2.1 2 0 0 2 2 2 0 Immortalisation up-regulated protein Herpes_capsid PF06112.11 NODE_38100_length_556_cov_151.598848_g30804_i0forward_frame_3 - 4.7 7.2 13.3 8.9 6.4 13.3 1.4 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Spt20 PF12090.8 NODE_38100_length_556_cov_151.598848_g30804_i0forward_frame_2 - 3 7.4 8.2 4.2 6.9 8.2 1.1 1 0 0 1 1 1 0 Spt20 family CA_like PF10563.9 NODE_38082_length_556_cov_7796.105566_g30786_i0forward_frame_3 - 2.8e-18 66.5 0.0 4.1e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Putative carbonic anhydrase DUF3289 PF11692.8 NODE_38078_length_557_cov_1.948276_g30783_i0reverse_frame_2 - 2.3e-05 24.1 0.1 3e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3289) tRNA-synt_1c PF00749.21 NODE_38075_length_557_cov_2.408046_g30780_i0reverse_frame_3 - 2.3e-58 197.6 0.1 2.9e-58 197.2 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain DUF5551 PF17705.1 NODE_38073_length_557_cov_3.109195_g30778_i0forward_frame_2 - 0.047 13.3 0.0 0.073 12.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5551) PPR_2 PF13041.6 NODE_38057_length_557_cov_84.507663_g30762_i0reverse_frame_2 - 2e-11 43.9 0.0 4.6e-09 36.3 0.0 1.9 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_38057_length_557_cov_84.507663_g30762_i0reverse_frame_2 - 2.6e-06 27.4 0.0 4.4e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 NODE_38057_length_557_cov_84.507663_g30762_i0reverse_frame_2 - 4.2e-05 23.5 0.0 0.002 18.3 0.0 2.5 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 NODE_38057_length_557_cov_84.507663_g30762_i0reverse_frame_2 - 0.00075 19.2 0.0 0.015 14.9 0.0 2.5 3 0 0 3 3 3 1 PPR repeat Serpin PF00079.20 NODE_38052_length_557_cov_94.593870_g30757_i0reverse_frame_2 - 0.13 11.5 0.3 0.21 10.8 0.0 1.4 2 0 0 2 2 2 0 Serpin (serine protease inhibitor) RseC_MucC PF04246.12 NODE_38052_length_557_cov_94.593870_g30757_i0forward_frame_2 - 0.28 11.2 3.5 0.59 10.1 3.5 1.5 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC OTOS PF15182.6 NODE_38039_length_557_cov_186.894636_g30744_i0forward_frame_2 - 2.9 7.9 5.7 10 6.2 2.9 2.4 3 0 0 3 3 3 0 Otospiralin ShK PF01549.24 NODE_38037_length_557_cov_197.509579_g30742_i0forward_frame_2 - 0.032 14.8 2.4 0.034 14.7 0.5 2.1 2 0 0 2 2 2 0 ShK domain-like Arf PF00025.21 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 2.6e-71 238.7 0.0 3e-71 238.5 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 3.2e-15 56.4 0.1 4.3e-15 56.0 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 7.9e-15 54.7 0.0 9.3e-15 54.5 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 2.8e-13 49.8 1.0 3.6e-09 36.3 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 5.2e-13 48.9 0.0 6.5e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 1e-10 41.4 0.0 1.3e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 2.8e-06 27.4 0.1 4.4e-06 26.8 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 0.0032 16.8 0.3 0.0056 16.0 0.3 1.6 1 1 0 1 1 1 1 6-phosphofructo-2-kinase cobW PF02492.19 NODE_38033_length_557_cov_325.572797_g30738_i0forward_frame_3 - 0.079 12.5 0.2 0.67 9.5 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain zf-HIT PF04438.16 NODE_38012_length_558_cov_3.365201_g30720_i0reverse_frame_3 - 6.8 6.7 16.4 5.4 7.0 8.2 2.9 3 0 0 3 3 3 0 HIT zinc finger tRNA-synt_1e PF01406.19 NODE_38011_length_558_cov_3.556405_g30719_i0reverse_frame_3 - 1.5e-83 280.6 0.0 1.7e-83 280.5 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 NODE_38011_length_558_cov_3.556405_g30719_i0reverse_frame_3 - 6e-07 28.5 0.1 7.2e-07 28.3 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) Mut7-C PF01927.16 NODE_38011_length_558_cov_3.556405_g30719_i0reverse_frame_3 - 0.0086 16.2 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 Mut7-C RNAse domain tRNA-synt_1c PF00749.21 NODE_38011_length_558_cov_3.556405_g30719_i0reverse_frame_3 - 0.057 12.3 0.0 0.17 10.7 0.0 2.0 2 1 0 2 2 2 0 tRNA synthetases class I (E and Q), catalytic domain PTR PF12789.7 NODE_38011_length_558_cov_3.556405_g30719_i0reverse_frame_3 - 0.19 11.8 0.6 0.77 9.9 0.1 1.9 2 0 0 2 2 2 0 Phage tail repeat like DUF4781 PF16013.5 NODE_38011_length_558_cov_3.556405_g30719_i0forward_frame_3 - 0.18 10.6 1.8 0.25 10.1 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) RhoGEF67_u2 PF16614.5 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_3 - 0.052 13.6 0.5 0.052 13.6 0.5 2.8 2 1 1 3 3 3 0 Unstructured region two on RhoGEF 6 and 7 Ank_2 PF12796.7 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_2 - 1.8e-17 63.7 0.8 6.1e-13 49.2 0.3 2.8 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_2 - 6.9e-13 48.8 0.3 8.8e-09 35.7 0.1 3.3 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_2 - 3.7e-12 46.2 1.9 4.6e-05 23.6 0.0 4.1 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_2 - 1.6e-10 40.9 0.7 0.00052 20.3 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_2 - 5.2e-10 38.7 2.1 0.00027 21.1 0.0 4.2 5 0 0 5 5 5 2 Ankyrin repeat DUF3734 PF12536.8 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_2 - 0.073 13.4 0.0 1.3 9.4 0.0 2.1 2 0 0 2 2 2 0 Patatin phospholipase DUF664 PF04978.12 NODE_37991_length_558_cov_95.281071_g30699_i0reverse_frame_2 - 0.15 12.4 2.1 13 6.2 0.1 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF664) TMF_TATA_bd PF12325.8 NODE_37984_length_558_cov_119.311663_g30692_i0forward_frame_2 - 0.0056 16.9 0.7 0.0081 16.4 0.7 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding F-box PF00646.33 NODE_37980_length_558_cov_172.558317_g30689_i0reverse_frame_2 - 0.063 13.2 0.6 0.11 12.4 0.6 1.3 1 0 0 1 1 1 0 F-box domain Speriolin_N PF15058.6 NODE_37980_length_558_cov_172.558317_g30689_i0forward_frame_3 - 0.23 11.5 2.6 0.3 11.1 2.6 1.1 1 0 0 1 1 1 0 Speriolin N terminus ATP-synt_10 PF05176.14 NODE_37973_length_558_cov_246.529637_g30682_i0forward_frame_2 - 6.3e-07 28.9 0.0 8.8e-07 28.4 0.0 1.3 1 0 0 1 1 1 1 ATP10 protein GIDA_assoc PF13932.6 ORF98893 - 0.095 12.9 6.5 0.12 12.5 6.5 1.1 1 0 0 1 1 1 0 GidA associated domain CcdA PF07362.12 ORF98893 - 0.21 12.0 2.8 5.6 7.5 0.2 2.7 3 0 0 3 3 3 0 Post-segregation antitoxin CcdA Glutaredoxin PF00462.24 ORF98893 - 0.34 11.2 1.7 0.71 10.1 0.4 2.2 2 0 0 2 2 2 0 Glutaredoxin FapA PF03961.13 ORF98893 - 0.41 9.2 2.8 0.47 9.0 2.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Histone_HNS PF00816.21 ORF98893 - 1.4 9.8 10.2 8.2 7.3 6.4 2.9 1 1 0 2 2 2 0 H-NS histone family Ank_2 PF12796.7 ORF96819 - 3e-16 59.8 0.3 1.3e-08 35.3 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF96819 - 6.4e-14 52.1 0.0 4e-05 24.1 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF96819 - 4.9e-13 49.0 0.1 9.1e-07 29.0 0.0 3.8 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF96819 - 2.2e-11 42.9 0.2 2e-05 24.6 0.0 3.9 5 0 0 5 5 5 2 Ankyrin repeat Ank PF00023.30 ORF96819 - 4.1e-09 36.5 0.6 0.031 14.7 0.0 4.2 3 1 1 4 4 4 2 Ankyrin repeat DUF3447 PF11929.8 ORF96819 - 0.0029 17.5 0.5 0.0057 16.6 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF3447) PIG-S PF10510.9 ORF95095 - 0.016 14.1 0.0 0.02 13.7 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-glycan biosynthesis class S protein DUF2661 PF10860.8 ORF95013 - 0.16 12.1 2.1 0.18 11.9 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2661) dsrm PF00035.26 ORF94901 - 0.0001 22.9 0.0 0.00024 21.8 0.0 1.6 1 0 0 1 1 1 1 Double-stranded RNA binding motif KH_1 PF00013.29 ORF94901 - 0.0031 17.3 0.0 0.0068 16.2 0.0 1.6 1 0 0 1 1 1 1 KH domain IstB_IS21 PF01695.17 ORF94901 - 0.071 12.8 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein HNH_repeat PF18780.1 ORF94901 - 0.074 12.9 0.6 0.16 11.8 0.6 1.5 1 0 0 1 1 1 0 Homing endonuclease repeat DUF3933 PF13069.6 ORF94901 - 0.15 12.0 0.2 0.3 11.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3933) YrhC PF14143.6 ORF92449 - 0.035 14.2 0.5 0.035 14.2 0.5 2.9 2 1 1 3 3 3 0 YrhC-like protein FHA PF00498.26 ORF91068 - 9.2e-10 38.7 0.0 1.7e-09 37.9 0.0 1.5 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF91068 - 8.8e-07 29.2 0.1 1.4e-06 28.5 0.1 1.3 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain HR_lesion PF05514.11 ORF85217 - 1.3e-05 25.4 0.4 1.7e-05 25.0 0.4 1.2 1 0 0 1 1 1 1 HR-like lesion-inducing DoxX PF07681.12 ORF85217 - 7.2e-05 23.3 2.6 7.2e-05 23.3 2.6 2.0 2 1 0 2 2 2 1 DoxX DoxX_2 PF13564.6 ORF85217 - 8.7e-05 22.6 2.4 0.00028 20.9 2.4 1.9 1 1 0 1 1 1 1 DoxX-like family UPF0239 PF06783.11 ORF85217 - 0.01 16.0 2.9 0.021 15.0 2.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0239) TSGP1 PF07771.11 ORF85217 - 6.6 6.9 12.5 1.6 8.9 9.1 1.7 2 0 0 2 2 2 0 Tick salivary peptide group 1 DUF3040 PF11239.8 ORF85217 - 8.1 6.8 6.0 2.4 8.5 0.8 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3040) UPF0020 PF01170.18 ORF84035 - 3.4e-06 26.9 0.0 4.6e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 ORF84035 - 4.4e-06 26.4 0.1 9.3e-06 25.3 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase small domain PRMT5 PF05185.16 ORF84035 - 0.0002 21.2 0.4 0.00026 20.9 0.4 1.1 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase Cons_hypoth95 PF03602.15 ORF84035 - 0.00085 19.0 0.0 0.0011 18.7 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Eco57I PF07669.11 ORF84035 - 0.032 14.7 0.0 0.053 14.0 0.0 1.5 1 0 0 1 1 1 0 Eco57I restriction-modification methylase Methyltransf_10 PF05971.12 ORF84035 - 0.047 13.0 0.1 0.061 12.7 0.1 1.1 1 0 0 1 1 1 0 RNA methyltransferase Methyltransf_3 PF01596.17 ORF84035 - 0.12 11.6 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase Antimicrobial25 PF16839.5 ORF80152 - 0.13 12.4 1.2 0.27 11.3 0.5 1.9 2 0 0 2 2 2 0 Nematode antimicrobial peptide mit_SMPDase PF14724.6 ORF80152 - 0.23 9.4 0.4 0.31 9.0 0.4 1.1 1 0 0 1 1 1 0 Mitochondrial-associated sphingomyelin phosphodiesterase EF-hand_7 PF13499.6 ORF78348 - 8.7e-15 54.9 1.1 1.7e-14 54.0 1.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF78348 - 1.5e-13 49.2 8.2 1.2e-06 27.6 0.6 3.1 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF78348 - 4.2e-12 45.0 2.3 3e-05 23.3 0.2 2.8 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF78348 - 7e-11 41.8 5.3 3.6e-07 29.9 0.3 2.7 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF78348 - 8.1e-10 37.8 4.9 4.1e-05 23.2 0.0 3.0 4 0 0 4 4 4 2 EF-hand domain FAM183 PF14886.6 ORF78348 - 4.5e-08 33.8 1.5 5.8e-08 33.4 1.5 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related SPARC_Ca_bdg PF10591.9 ORF78348 - 0.006 16.9 0.1 0.006 16.9 0.1 2.1 2 1 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region LTXXQ PF07813.12 ORF78348 - 0.041 14.6 0.5 0.041 14.6 0.5 1.5 2 0 0 2 2 2 0 LTXXQ motif family protein Luciferase_3H PF10284.9 ORF78348 - 0.068 13.4 0.2 0.27 11.4 0.0 2.0 2 1 0 2 2 2 0 Luciferase helical bundle domain Arf PF00025.21 ORF77417 - 2.6e-67 225.6 0.2 2.9e-67 225.5 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF77417 - 2e-14 53.9 0.0 3e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF77417 - 5.6e-13 48.7 0.0 6.6e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF77417 - 1.1e-12 47.8 0.0 1.3e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF77417 - 1.8e-11 43.8 0.2 4.6e-07 29.3 0.0 2.3 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF77417 - 1.7e-08 34.1 0.0 2.2e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF77417 - 2.8e-08 33.8 0.0 4.5e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF77417 - 0.00019 21.1 0.1 0.0048 16.4 0.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AAA_18 PF13238.6 ORF77417 - 0.0018 18.8 0.0 0.0037 17.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 ORF77417 - 0.012 15.3 0.1 0.12 12.2 0.0 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation ABC_tran PF00005.27 ORF77417 - 0.11 13.1 0.1 0.12 12.8 0.1 1.5 1 1 0 1 1 1 0 ABC transporter FeoB_N PF02421.18 ORF77417 - 0.14 11.7 0.2 0.4 10.2 0.2 2.0 1 1 0 1 1 1 0 Ferrous iron transport protein B EF-hand_7 PF13499.6 ORF76942 - 8.7e-15 54.9 1.1 1.7e-14 54.0 1.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF76942 - 1.5e-13 49.2 8.2 1.2e-06 27.6 0.6 3.1 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF76942 - 4.2e-12 45.0 2.3 3e-05 23.3 0.2 2.8 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF76942 - 7e-11 41.8 5.3 3.6e-07 29.9 0.3 2.7 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF76942 - 8.1e-10 37.8 4.9 4.1e-05 23.2 0.0 3.0 4 0 0 4 4 4 2 EF-hand domain FAM183 PF14886.6 ORF76942 - 4.5e-08 33.8 1.5 5.8e-08 33.4 1.5 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related SPARC_Ca_bdg PF10591.9 ORF76942 - 0.006 16.9 0.1 0.006 16.9 0.1 2.1 2 1 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region LTXXQ PF07813.12 ORF76942 - 0.041 14.6 0.5 0.041 14.6 0.5 1.5 2 0 0 2 2 2 0 LTXXQ motif family protein Luciferase_3H PF10284.9 ORF76942 - 0.068 13.4 0.2 0.27 11.4 0.0 2.0 2 1 0 2 2 2 0 Luciferase helical bundle domain Pex14_N PF04695.13 ORF74461 - 0.1 13.2 0.4 0.18 12.4 0.4 1.4 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region YlqD PF11068.8 ORF74461 - 0.11 12.8 3.2 0.17 12.3 3.2 1.3 1 1 0 1 1 1 0 YlqD protein UQ_con PF00179.26 ORF71883 - 7.7e-35 119.6 0.1 9.6e-35 119.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Adenyl_cycl_N PF12633.7 ORF71746 - 0.0017 18.3 0.1 0.0023 17.9 0.1 1.2 1 0 0 1 1 1 1 Adenylate cyclase NT domain DUF707 PF05212.12 ORF71746 - 0.012 14.9 0.3 0.022 14.1 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF707) DnaT PF17948.1 ORF71746 - 2.1 8.1 5.7 19 5.0 0.3 3.0 3 0 0 3 3 3 0 DnaT DNA-binding domain YrzK PF17449.2 ORF70951 - 0.012 15.9 0.1 0.028 14.7 0.1 1.7 1 1 0 1 1 1 0 Uncharacterized YrzK-like Adeno_knob PF00541.17 ORF69033 - 0.086 12.6 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Adenoviral fibre protein (knob domain) DUF1218 PF06749.12 ORF62866 - 0.22 12.1 0.2 0.22 12.1 0.2 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1218) RRM_1 PF00076.22 ORF62171 - 7.2e-09 35.3 0.0 1.1e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VHP PF02209.19 ORF59573 - 0.03 14.4 0.2 0.066 13.3 0.2 1.6 1 0 0 1 1 1 0 Villin headpiece domain NAPRTase_N PF17767.1 ORF59176 - 0.12 12.8 0.3 0.84 10.0 0.0 2.1 1 1 0 2 2 2 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LysR_substrate PF03466.20 ORF58923 - 2.4e-07 30.4 0.0 3.9e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain MORN PF02493.20 ORF57750 - 2.1e-09 36.7 15.1 0.0003 20.5 2.0 4.4 4 0 0 4 4 4 3 MORN repeat Pro_isomerase PF00160.21 ORF57702 - 5.3e-21 75.5 0.0 6.7e-21 75.2 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pro_isomerase PF00160.21 ORF56627 - 6.6e-46 156.5 0.0 7.6e-46 156.3 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PGA2 PF07543.12 ORF55835 - 0.032 14.2 1.9 0.032 14.2 1.9 1.9 2 0 0 2 2 2 0 Protein trafficking PGA2 MRP-S22 PF10245.9 ORF55035 - 0.02 14.7 0.0 0.026 14.2 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S22 Hypoth_Ymh PF09509.10 ORF52550 - 0.1 12.5 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (Hypoth_ymh) Viral_alk_exo PF01771.17 ORF52052 - 0.029 13.2 0.2 0.034 13.0 0.2 1.2 1 0 0 1 1 1 0 Viral alkaline exonuclease Babuvirus_MP PF07234.11 ORF52052 - 0.68 10.1 6.3 0.14 12.3 1.1 2.2 1 1 1 2 2 2 0 Movement and RNA silencing protein PARP PF00644.20 ORF51005 - 0.0012 18.5 0.0 0.029 14.0 0.0 2.6 2 1 0 2 2 2 1 Poly(ADP-ribose) polymerase catalytic domain Pribosyltran PF00156.27 ORF49203 - 1.3e-13 50.8 0.0 2e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF49203 - 0.0015 18.0 0.0 0.0023 17.4 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 ORF49203 - 0.0047 16.5 0.0 0.0069 15.9 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase Ig_5 PF16681.5 ORF478 - 0.037 14.4 0.1 0.064 13.7 0.1 1.3 1 0 0 1 1 1 0 Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain Pro_isomerase PF00160.21 ORF47349 - 6.6e-46 156.5 0.0 7.6e-46 156.3 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RCC1_2 PF13540.6 ORF45792 - 1e-06 28.4 5.8 0.93 9.4 0.0 4.2 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat AFP_2 PF18815.1 ORF45792 - 0.04 14.2 1.4 2.7 8.3 0.1 3.1 2 1 1 3 3 3 0 Bacterial antifreeze protein repeat Spectrin PF00435.21 ORF45792 - 0.048 14.2 0.2 2.7 8.5 0.1 2.8 2 1 1 3 3 3 0 Spectrin repeat Prion PF00377.18 ORF45697 - 0.0087 15.9 1.9 0.83 9.5 0.0 2.6 3 0 0 3 3 3 2 Prion/Doppel alpha-helical domain Fer4 PF00037.27 ORF44131 - 5.6e-14 51.3 11.8 1.1e-08 34.5 1.7 3.0 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 ORF44131 - 6.7e-13 49.0 9.1 6.7e-13 49.0 9.1 2.6 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF44131 - 1.2e-11 44.6 21.6 4.7e-09 36.3 10.8 3.1 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF44131 - 2.4e-09 37.2 10.9 2.4e-09 37.2 10.9 2.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF44131 - 1.7e-08 34.2 13.2 2.7e-05 24.0 3.7 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 ORF44131 - 3e-07 31.3 22.3 0.0011 19.9 1.7 3.5 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 ORF44131 - 3.2e-06 27.2 9.6 3.2e-06 27.2 9.6 2.7 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF44131 - 7.8e-06 25.7 11.7 0.00018 21.4 3.7 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.6 ORF44131 - 0.00015 22.2 12.3 0.00015 22.2 12.3 3.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF44131 - 0.0003 21.5 19.4 0.0047 17.8 7.3 3.6 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 ORF44131 - 0.0004 20.7 11.5 0.0014 19.0 2.7 4.2 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 ORF44131 - 0.00073 20.0 22.8 0.0033 17.9 11.6 3.6 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF44131 - 0.014 16.2 16.6 0.098 13.5 0.2 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 ORF44131 - 0.036 14.6 20.8 0.08 13.5 4.5 3.4 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 ORF44131 - 0.19 12.5 0.6 0.19 12.5 0.6 3.2 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 ORF44131 - 0.21 11.8 0.3 0.21 11.8 0.3 3.1 1 1 2 3 3 3 0 4Fe-4S dicluster domain Mob1_phocein PF03637.17 ORF42472 - 2.6e-76 255.4 0.5 2.9e-76 255.2 0.5 1.0 1 0 0 1 1 1 1 Mob1/phocein family DUF3752 PF12572.8 ORF39761 - 1.5e-07 32.1 7.6 2.2e-07 31.5 7.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3752) E2F_CC-MB PF16421.5 ORF36891 - 0.12 12.8 0.7 0.48 10.8 0.2 1.9 1 1 1 2 2 2 0 E2F transcription factor CC-MB domain zf-DNA_Pol PF08996.10 ORF36254 - 0.51 10.1 6.0 0.82 9.4 6.0 1.3 1 1 0 1 1 1 0 DNA Polymerase alpha zinc finger Stn1 PF10451.9 ORF29279 - 0.0079 15.2 0.8 0.01 14.8 0.8 1.2 1 0 0 1 1 1 1 Telomere regulation protein Stn1 Yip1 PF04893.17 ORF28312 - 5.3e-10 39.3 13.0 7.1e-10 38.9 13.0 1.2 1 0 0 1 1 1 1 Yip1 domain UPF0640 PF15114.6 ORF28312 - 0.023 14.5 0.4 0.051 13.4 0.3 1.7 1 1 0 1 1 1 0 Uncharacterised protein family UPF0640 PTPS PF01242.19 ORF25597 - 0.037 14.0 1.3 0.046 13.7 0.9 1.4 1 1 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase Apo-CIII PF05778.12 ORF25597 - 0.17 11.5 0.1 1.8 8.2 0.1 2.2 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) MORN PF02493.20 ORF25043 - 4.9e-20 70.2 20.3 1.8e-07 30.6 2.0 4.1 4 0 0 4 4 4 3 MORN repeat Pox_RNA_Pol_19 PF05320.12 ORF24427 - 0.031 14.2 1.9 0.05 13.6 1.9 1.3 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit MscL PF01741.18 ORF23744 - 0.024 14.9 0.0 0.036 14.4 0.0 1.4 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL DUF1563 PF07599.11 ORF23744 - 0.073 13.2 0.1 0.26 11.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1563) Eclosion PF04736.12 ORF21472 - 0.098 12.4 0.3 0.99 9.1 0.2 2.2 2 0 0 2 2 2 0 Eclosion hormone TauE PF01925.19 ORF19706 - 3.6e-09 36.6 12.5 4.3e-09 36.3 11.7 1.3 1 1 0 1 1 1 1 Sulfite exporter TauE/SafE PP_kinase_C PF13090.6 ORF18834 - 6.9e-67 224.2 0.0 7.8e-67 224.0 0.0 1.0 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain 2 PLDc_2 PF13091.6 ORF18834 - 0.00077 19.4 0.0 0.0013 18.6 0.0 1.5 1 1 0 1 1 1 1 PLD-like domain Mpv17_PMP22 PF04117.12 ORF16077 - 8e-20 70.8 5.7 8e-20 70.8 5.7 1.8 1 1 1 2 2 2 1 Mpv17 / PMP22 family zf-DNA_Pol PF08996.10 ORF150773 - 0.51 10.1 6.0 0.82 9.4 6.0 1.3 1 1 0 1 1 1 0 DNA Polymerase alpha zinc finger TMF_DNA_bd PF12329.8 ORF144249 - 0.0016 18.4 2.1 0.0016 18.4 2.1 2.2 2 1 0 2 2 2 1 TATA element modulatory factor 1 DNA binding ZapB PF06005.12 ORF144249 - 0.006 17.0 0.6 0.006 17.0 0.6 1.9 2 0 0 2 2 2 1 Cell division protein ZapB ATG16 PF08614.11 ORF144249 - 0.0066 16.7 0.4 0.0066 16.7 0.4 2.2 2 0 0 2 2 2 1 Autophagy protein 16 (ATG16) GAS PF13851.6 ORF144249 - 0.0091 15.4 0.3 0.0091 15.4 0.3 1.9 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding Prefoldin_2 PF01920.20 ORF144249 - 0.018 15.0 1.3 0.018 15.0 1.3 2.1 2 0 0 2 2 2 0 Prefoldin subunit SlyX PF04102.12 ORF144249 - 0.038 14.6 0.6 0.038 14.6 0.6 1.8 2 0 0 2 2 2 0 SlyX DivIC PF04977.15 ORF144249 - 0.8 9.5 5.2 0.35 10.7 2.5 1.8 2 0 0 2 2 2 0 Septum formation initiator Striatin PF08232.12 ORF144249 - 3.9 8.0 10.5 12 6.5 10.5 1.7 1 1 0 1 1 1 0 Striatin family Pox_A_type_inc PF04508.12 ORF144249 - 8 6.5 13.8 0.75 9.8 2.0 2.8 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat zf-MIZ PF02891.20 ORF143294 - 1.2 9.0 11.4 3.2 7.6 1.2 2.6 2 1 0 2 2 2 0 MIZ/SP-RING zinc finger PIG-S PF10510.9 ORF139561 - 0.016 14.1 0.0 0.02 13.7 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-glycan biosynthesis class S protein NUDE_C PF04880.13 ORF138174 - 0.0086 16.6 3.3 0.012 16.1 3.3 1.2 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region zf-C2H2_aberr PF17017.5 ORF137649 - 0.046 13.9 4.1 0.072 13.2 0.4 2.0 1 1 0 2 2 2 0 Aberrant zinc-finger PTPS PF01242.19 ORF137640 - 0.037 14.0 1.3 0.046 13.7 0.9 1.4 1 1 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase Apo-CIII PF05778.12 ORF137640 - 0.17 11.5 0.1 1.8 8.2 0.1 2.2 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) YtfJ_HI0045 PF09695.10 ORF134019 - 8.6e-75 249.7 0.2 9.9e-75 249.6 0.2 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (YtfJ_HI0045) ATP-synt_10 PF05176.14 ORF134019 - 0.05 12.8 0.1 0.064 12.5 0.1 1.3 1 1 0 1 1 1 0 ATP10 protein Pyridox_ox_2 PF12900.7 ORF134019 - 0.098 12.7 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF2922 PF11148.8 ORF134019 - 0.12 12.2 0.0 0.62 9.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2922) DUF1007 PF06226.13 ORF134019 - 0.23 11.4 0.1 0.23 11.4 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1007) FAD_binding_3 PF01494.19 ORF133266 - 2.2e-09 37.0 0.0 2.5e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF133266 - 0.00072 18.7 0.0 0.00077 18.6 0.0 1.1 1 0 0 1 1 1 1 Squalene epoxidase Lycopene_cycl PF05834.12 ORF133266 - 0.0074 15.4 0.1 0.02 14.0 0.1 1.6 1 1 0 2 2 2 1 Lycopene cyclase protein AAA_19 PF13245.6 ORF133266 - 0.095 13.0 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain Hpt PF01627.23 ORF133266 - 0.11 12.8 0.1 0.88 9.9 0.2 2.1 1 1 1 2 2 2 0 Hpt domain Yip1 PF04893.17 ORF12944 - 5.3e-10 39.3 13.0 7.1e-10 38.9 13.0 1.2 1 0 0 1 1 1 1 Yip1 domain UPF0640 PF15114.6 ORF12944 - 0.023 14.5 0.4 0.051 13.4 0.3 1.7 1 1 0 1 1 1 0 Uncharacterised protein family UPF0640 DUF4148 PF13663.6 ORF129151 - 1.5 9.0 4.7 0.9 9.8 1.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) MARVEL PF01284.23 ORF128069 - 0.01 15.9 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 0 Membrane-associating domain CSN7a_helixI PF18392.1 ORF128069 - 0.18 11.7 0.2 0.33 10.9 0.2 1.4 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain Ion_trans_2 PF07885.16 ORF127719 - 4.4e-06 26.6 0.5 6.7e-06 26.0 0.5 1.2 1 0 0 1 1 1 1 Ion channel TetR_C_17 PF17922.1 ORF127719 - 0.19 11.8 3.6 0.28 11.3 0.8 2.5 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain DUF5068 PF16781.5 ORF126033 - 0.017 14.9 0.1 0.036 13.8 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5068) Sex_peptide PF08138.11 ORF125033 - 0.021 15.0 1.6 1.3 9.2 0.0 2.4 1 1 1 2 2 2 0 Sex peptide (SP) family DUF4769 PF15992.5 ORF124978 - 0.43 10.3 3.3 0.57 9.9 3.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) Pkinase PF00069.25 ORF123683 - 0.00031 20.2 0.1 0.002 17.5 0.0 2.1 2 0 0 2 2 2 1 Protein kinase domain DUF5068 PF16781.5 ORF122294 - 0.017 14.9 0.1 0.036 13.8 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5068) DUF5643 PF18705.1 ORF120823 - 0.034 14.1 0.2 0.063 13.2 0.2 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5643) TauE PF01925.19 ORF120478 - 7.4e-12 45.4 15.8 7.4e-12 45.4 15.8 1.7 2 0 0 2 2 2 1 Sulfite exporter TauE/SafE Ski_Sno PF02437.17 ORF119912 - 0.19 11.5 2.8 0.32 10.7 2.8 1.4 1 0 0 1 1 1 0 SKI/SNO/DAC family NPHI_C PF08469.10 ORF117324 - 0.026 14.5 4.4 0.07 13.1 3.6 2.1 1 1 1 2 2 2 0 Nucleoside triphosphatase I C-terminal Complex1_LYR_2 PF13233.6 ORF117324 - 0.27 12.0 3.1 0.47 11.2 3.1 1.7 1 1 0 1 1 1 0 Complex1_LYR-like DUF2524 PF10732.9 ORF117324 - 0.33 11.3 7.2 0.31 11.4 5.0 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2524) DUF5390 PF17365.2 ORF117324 - 1.3 9.3 7.8 0.13 12.5 1.6 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5390) FliD_N PF02465.18 ORF117324 - 6 7.6 8.8 2.3 9.0 1.1 2.8 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus UQ_con PF00179.26 ORF117215 - 9.7e-12 44.7 0.1 1.6e-11 44.0 0.0 1.4 1 1 0 1 1 1 1 Ubiquitin-conjugating enzyme Pribosyltran PF00156.27 ORF113033 - 1.2e-13 50.8 0.0 1.8e-13 50.3 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF113033 - 0.0015 18.0 0.0 0.0024 17.3 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 ORF113033 - 0.0045 16.5 0.0 0.0066 16.0 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase HTH_24 PF13412.6 ORF1122 - 0.21 11.2 0.0 0.64 9.6 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding GLTT PF01744.20 ORF109422 - 1.4 8.7 4.0 2 8.3 0.1 2.8 3 0 0 3 3 3 0 GLTT repeat (6 copies) GSHPx PF00255.19 ORF104987 - 4.8e-35 119.4 3.7 6.8e-35 118.9 3.7 1.2 1 0 0 1 1 1 1 Glutathione peroxidase AhpC-TSA PF00578.21 ORF104987 - 0.0041 17.0 1.0 0.0082 16.1 1.0 1.6 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF104987 - 0.0097 15.6 0.2 0.13 11.9 0.2 2.1 1 1 0 1 1 1 1 Redoxin Caleosin PF05042.13 ORF104987 - 0.043 13.7 0.1 0.092 12.7 0.1 1.5 1 1 0 1 1 1 0 Caleosin related protein EamA PF00892.20 ORF104024 - 0.00012 22.3 12.1 0.00016 21.9 12.1 1.2 1 0 0 1 1 1 1 EamA-like transporter family DUF5373 PF17343.2 ORF104024 - 0.048 13.5 0.3 0.059 13.2 0.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5373) DUF3302 PF11742.8 ORF104024 - 0.052 13.7 0.1 0.12 12.5 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3302) DUF3742 PF12553.8 ORF104024 - 0.073 13.2 1.4 34 4.6 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3742) MARVEL PF01284.23 ORF104018 - 0.01 15.8 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 0 Membrane-associating domain CSN7a_helixI PF18392.1 ORF104018 - 0.18 11.7 0.2 0.33 10.9 0.2 1.4 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain Nup54 PF13874.6 ORF103912 - 8.7e-07 29.1 5.7 8.7e-07 29.1 5.7 1.7 2 0 0 2 2 2 1 Nucleoporin complex subunit 54 DUF4061 PF13270.6 ORF103912 - 1.1 9.6 6.4 0.34 11.3 3.5 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4061) Chromo PF00385.24 ORF103862 - 2.4e-14 53.0 1.9 6.2e-14 51.6 1.9 1.7 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain Chromo_shadow PF01393.19 ORF103862 - 5.1e-06 26.5 0.4 5.1e-05 23.3 0.0 2.2 2 0 0 2 2 2 1 Chromo shadow domain RCC1_2 PF13540.6 ORF102629 - 0.0024 17.6 0.1 0.0088 15.8 0.0 1.9 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF102629 - 0.0024 18.5 0.0 0.075 13.7 0.0 2.6 2 1 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat CdiA_C_tRNase PF18664.1 ORF102629 - 0.04 14.1 0.1 0.46 10.7 0.0 2.2 2 0 0 2 2 2 0 CdiA C-terminal tRNase domain DUF5590 PF17881.1 NODE_38435_length_550_cov_2.083495_g31106_i0forward_frame_1 - 0.16 12.1 0.2 0.24 11.5 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5590) AGTRAP PF06396.11 NODE_38435_length_550_cov_2.083495_g31106_i0forward_frame_1 - 0.27 11.0 4.3 0.44 10.3 4.3 1.4 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) Miff PF05644.11 NODE_38423_length_550_cov_67.448544_g31095_i0forward_frame_1 - 0.02 14.6 2.4 0.026 14.2 2.4 1.1 1 0 0 1 1 1 0 Mitochondrial and peroxisomal fission factor Mff # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks130.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks130.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks130.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks130.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:01:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- IHO1 PF15771.5 NODE_38422_length_550_cov_75.289320_g31094_i0reverse_frame_1 - 0.61 8.8 2.7 0.62 8.8 2.7 1.2 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 TSNAXIP1_N PF15739.5 NODE_38420_length_550_cov_83.137864_g31092_i0forward_frame_1 - 0.13 12.7 0.1 0.22 11.9 0.1 1.3 1 0 0 1 1 1 0 Translin-associated factor X-interacting N-terminus DUF309 PF03745.14 NODE_38418_length_550_cov_85.299029_g31090_i0forward_frame_1 - 0.16 11.7 0.1 0.27 11.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF309) DnaJ PF00226.31 NODE_38417_length_550_cov_87.887379_g31089_i0reverse_frame_1 - 0.0061 16.7 0.0 0.017 15.3 0.0 1.7 2 0 0 2 2 2 1 DnaJ domain TPPK_C PF12555.8 NODE_38417_length_550_cov_87.887379_g31089_i0reverse_frame_1 - 1.4 9.0 4.9 0.49 10.5 0.7 2.1 1 1 1 2 2 2 0 Thiamine pyrophosphokinase C terminal TMEM210 PF15195.6 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_1 - 0.049 14.1 0.0 0.098 13.1 0.0 1.5 2 0 0 2 2 2 0 TMEM210 family AfaD PF05775.12 NODE_38403_length_550_cov_272.209709_g31076_i0forward_frame_1 - 0.051 14.0 0.1 0.37 11.3 0.0 2.0 2 0 0 2 2 2 0 Enterobacteria AfaD invasin protein ArsC PF03960.15 NODE_38401_length_550_cov_331.044660_g31074_i0reverse_frame_1 - 0.047 13.7 0.1 0.078 13.0 0.1 1.4 1 0 0 1 1 1 0 ArsC family PSI_PsaE PF02427.17 NODE_38399_length_550_cov_628.667961_g31072_i0forward_frame_1 - 7.7e-24 83.1 1.3 1.1e-23 82.6 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE PIN_6 PF17146.4 NODE_38390_length_551_cov_2.517442_g31065_i0reverse_frame_1 - 0.044 14.3 1.1 0.17 12.4 0.7 2.1 2 1 0 2 2 2 0 PIN domain of ribonuclease DUF5331 PF17265.2 NODE_38384_length_551_cov_2.994186_g31059_i0reverse_frame_1 - 0.087 12.6 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5331) PcF PF09461.10 NODE_38372_length_551_cov_70.335271_g31048_i0reverse_frame_1 - 0.068 13.5 2.0 0.068 13.5 2.0 2.6 3 1 0 3 3 3 0 Phytotoxin PcF protein Menin PF05053.13 NODE_38363_length_551_cov_132.889535_g31039_i0reverse_frame_1 - 0.011 14.2 0.0 0.014 13.8 0.0 1.1 1 0 0 1 1 1 0 Menin TNFR_c6 PF00020.18 NODE_38353_length_551_cov_218.240310_g31030_i0reverse_frame_1 - 0.025 15.0 2.9 1 9.8 0.7 2.4 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region FAM217 PF15344.6 NODE_38353_length_551_cov_218.240310_g31030_i0forward_frame_1 - 0.00062 19.8 1.0 0.00076 19.5 1.0 1.1 1 0 0 1 1 1 1 FAM217 family YoqO PF14037.6 NODE_38344_length_551_cov_1060.994186_g31023_i0forward_frame_1 - 0.14 12.7 0.1 3.4 8.2 0.0 2.1 2 0 0 2 2 2 0 YoqO-like protein DUF3098 PF11297.8 NODE_38344_length_551_cov_1060.994186_g31023_i0forward_frame_1 - 0.15 11.7 0.0 3.1 7.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) DUF987 PF06174.11 NODE_38331_length_552_cov_2.698259_g31012_i0forward_frame_1 - 0.037 13.9 0.5 2.1 8.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF987) Baculo_LEF-2 PF03041.14 NODE_38328_length_552_cov_3.032882_g31009_i0reverse_frame_1 - 0.083 12.5 1.5 0.13 11.9 1.5 1.3 1 0 0 1 1 1 0 lef-2 FapA PF03961.13 NODE_38296_length_553_cov_2.123552_g30983_i0reverse_frame_3 - 0.0069 15.0 2.5 0.0085 14.7 2.5 1.1 1 0 0 1 1 1 1 Flagellar Assembly Protein A TMPIT PF07851.13 NODE_38296_length_553_cov_2.123552_g30983_i0reverse_frame_3 - 0.017 14.4 3.5 0.02 14.1 3.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein Herpes_UL43 PF05072.13 NODE_38296_length_553_cov_2.123552_g30983_i0reverse_frame_3 - 0.035 13.2 0.0 0.053 12.6 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus UL43 protein PBP_sp32 PF07222.12 NODE_38286_length_553_cov_3.550193_g30973_i0forward_frame_2 - 0.09 12.2 2.1 0.14 11.6 2.1 1.3 1 0 0 1 1 1 0 Proacrosin binding protein sp32 SLC3A2_N PF16028.5 NODE_38285_length_553_cov_3.637066_g30972_i0reverse_frame_3 - 0.18 11.4 0.9 0.4 10.3 0.9 1.6 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Gemini_BL1 PF00845.19 NODE_38284_length_553_cov_4.749035_g30971_i0reverse_frame_3 - 0.043 13.4 0.1 0.066 12.8 0.1 1.3 1 0 0 1 1 1 0 Geminivirus BL1 movement protein RVT_2 PF07727.14 NODE_38283_length_553_cov_4.832046_g30970_i0forward_frame_3 - 0.00041 20.1 0.0 0.0005 19.8 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) HTH_43 PF09904.9 NODE_38261_length_553_cov_138.876448_g30949_i0reverse_frame_2 - 0.027 14.4 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Peptidase_S32 PF05579.13 NODE_38257_length_553_cov_180.079151_g30945_i0reverse_frame_3 - 0.049 12.8 0.7 0.065 12.4 0.7 1.2 1 0 0 1 1 1 0 Equine arteritis virus serine endopeptidase S32 ATP-synt_A PF00119.20 NODE_38240_length_554_cov_1.932563_g30934_i0reverse_frame_2 - 0.013 15.4 0.8 0.019 15.0 0.8 1.4 1 0 0 1 1 1 0 ATP synthase A chain Pro_sub2 PF18513.1 NODE_38240_length_554_cov_1.932563_g30934_i0forward_frame_3 - 0.062 13.5 2.1 0.12 12.6 1.5 1.8 1 1 1 2 2 2 0 Prodomain subtilisin 2 Harakiri PF15196.6 NODE_38224_length_554_cov_54.865125_g30919_i0reverse_frame_2 - 0.12 12.8 6.9 0.073 13.5 2.4 2.5 2 1 0 2 2 2 0 Activator of apoptosis harakiri Mito_fiss_reg PF05308.11 NODE_38224_length_554_cov_54.865125_g30919_i0forward_frame_2 - 0.0069 16.5 9.9 0.0092 16.1 9.9 1.1 1 0 0 1 1 1 1 Mitochondrial fission regulator CAP_N PF01213.19 NODE_38224_length_554_cov_54.865125_g30919_i0forward_frame_2 - 0.009 15.5 11.1 0.011 15.2 11.1 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal PAT1 PF09770.9 NODE_38224_length_554_cov_54.865125_g30919_i0forward_frame_2 - 0.15 10.3 2.3 0.16 10.2 2.3 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 PRIMA1 PF16101.5 NODE_38224_length_554_cov_54.865125_g30919_i0forward_frame_2 - 0.39 10.8 12.0 0.64 10.1 12.0 1.4 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Totivirus_coat PF05518.11 NODE_38224_length_554_cov_54.865125_g30919_i0forward_frame_2 - 1.1 7.3 5.8 1.2 7.1 5.8 1.0 1 0 0 1 1 1 0 Totivirus coat protein DUF1180 PF06679.12 NODE_38224_length_554_cov_54.865125_g30919_i0forward_frame_2 - 1.7 9.1 5.0 2.3 8.6 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) PPR PF01535.20 NODE_38200_length_554_cov_193.861272_g30895_i0forward_frame_3 - 1.6e-07 31.1 0.0 0.015 15.5 0.0 3.3 3 0 0 3 3 3 2 PPR repeat PPR_2 PF13041.6 NODE_38200_length_554_cov_193.861272_g30895_i0forward_frame_3 - 1.7e-06 28.1 0.0 0.00015 21.8 0.0 3.1 2 1 1 3 3 3 2 PPR repeat family PPR_long PF17177.4 NODE_38200_length_554_cov_193.861272_g30895_i0forward_frame_3 - 0.03 13.7 0.0 0.04 13.3 0.0 1.3 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Bac_chlorC PF02043.17 NODE_38200_length_554_cov_193.861272_g30895_i0forward_frame_3 - 0.15 12.1 0.0 0.39 10.8 0.0 1.7 1 1 1 2 2 2 0 Bacteriochlorophyll C binding protein Pacifastin_I PF05375.13 NODE_38195_length_554_cov_261.086705_g29201_i1forward_frame_2 - 3.9 7.3 10.8 3.8 7.3 4.5 2.4 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) Pox_VLTF3 PF04947.14 NODE_38183_length_555_cov_2.915385_g30879_i0reverse_frame_2 - 0.017 14.9 0.4 0.021 14.6 0.4 1.2 1 0 0 1 1 1 0 Poxvirus Late Transcription Factor VLTF3 like GoLoco PF02188.17 NODE_38183_length_555_cov_2.915385_g30879_i0forward_frame_3 - 0.075 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 GoLoco motif GUB_WAK_bind PF13947.6 NODE_38179_length_555_cov_3.613462_g30875_i0forward_frame_3 - 0.0053 17.5 0.8 0.0085 16.8 0.8 1.3 1 0 0 1 1 1 1 Wall-associated receptor kinase galacturonan-binding Herpes_UL92 PF03048.14 NODE_38175_length_555_cov_62.121154_g30871_i0forward_frame_2 - 0.0025 17.6 2.7 0.0034 17.2 2.7 1.3 1 0 0 1 1 1 1 UL92 family DUF5083 PF16890.5 NODE_38161_length_555_cov_108.534615_g24045_i1forward_frame_3 - 0.075 12.8 0.9 1.4 8.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5083) zf-C3HC4 PF00097.25 NODE_38154_length_555_cov_186.746154_g30851_i0reverse_frame_3 - 0.05 13.5 3.1 0.16 11.9 3.1 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) HXXEE PF13787.6 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_3 - 0.11 13.2 0.7 68 4.3 0.1 3.4 2 1 1 3 3 3 0 Protein of unknown function with HXXEE motif Ribosomal_S26e PF01283.19 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_3 - 0.52 10.8 7.5 9.4 6.7 0.2 3.0 2 1 1 3 3 3 0 Ribosomal protein S26e RCC1_2 PF13540.6 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_2 - 8.8e-09 34.9 17.4 0.12 12.3 0.1 5.5 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_2 - 0.025 14.7 9.0 18 5.4 0.0 4.8 2 2 2 4 4 4 0 Uncharacterised ACR, YagE family COG1723 DpnD-PcfM PF14207.6 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_2 - 0.083 12.8 0.2 21 5.1 0.0 2.6 2 0 0 2 2 2 0 DpnD/PcfM-like protein NPV_P10 PF05531.12 NODE_38148_length_555_cov_346.675000_g30845_i0reverse_frame_2 - 0.2 12.1 3.8 47 4.5 0.0 3.6 4 0 0 4 4 4 0 Nucleopolyhedrovirus P10 protein CRAM_rpt PF07016.11 NODE_38148_length_555_cov_346.675000_g30845_i0forward_frame_3 - 0.014 15.2 3.3 3.3 7.6 0.2 2.5 2 0 0 2 2 2 0 Cysteine-rich acidic integral membrane protein precursor Cys_Knot_tox PF17486.2 NODE_38148_length_555_cov_346.675000_g30845_i0forward_frame_3 - 0.022 15.0 0.5 10 6.4 0.1 2.5 2 0 0 2 2 2 0 Cystine knot toxins Phage_BR0599 PF09356.10 NODE_38148_length_555_cov_346.675000_g30845_i0forward_frame_3 - 0.11 12.9 0.6 13 6.2 0.0 2.8 3 0 0 3 3 3 0 Phage conserved hypothetical protein BR0599 GerPB PF10803.8 NODE_38148_length_555_cov_346.675000_g30845_i0forward_frame_3 - 0.13 12.4 0.1 2.1 8.5 0.1 2.7 3 0 0 3 3 3 0 Spore germination GerPB zf-ribbon_3 PF13248.6 NODE_38143_length_555_cov_820.696154_g30841_i0forward_frame_2 - 0.00019 20.7 0.3 0.00066 19.0 0.3 2.0 1 0 0 1 1 1 1 zinc-ribbon domain XPC-binding PF09280.11 ORF99293 - 0.0013 18.5 3.2 0.038 13.7 2.1 3.0 2 1 0 2 2 2 1 XPC-binding domain TAL_FSA PF00923.19 ORF99293 - 0.079 12.3 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 Transaldolase/Fructose-6-phosphate aldolase COX_ARM PF06481.14 ORF99293 - 0.11 12.5 0.0 0.21 11.5 0.0 1.5 1 0 0 1 1 1 0 COX Aromatic Rich Motif S1FA PF04689.13 ORF95442 - 0.0048 17.0 0.0 0.0074 16.4 0.0 1.2 1 0 0 1 1 1 1 DNA binding protein S1FA Methyltransf_PK PF05891.12 ORF9362 - 0.1 12.1 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase SIR2 PF02146.17 ORF9362 - 0.11 12.4 0.9 0.2 11.5 0.9 1.4 1 0 0 1 1 1 0 Sir2 family LMBR1 PF04791.16 ORF90549 - 5.9e-08 32.1 4.6 7.6e-08 31.7 4.6 1.1 1 0 0 1 1 1 1 LMBR1-like membrane protein Zn_Tnp_IS91 PF14319.6 ORF87448 - 5 7.2 8.0 1.8 8.7 3.4 2.3 2 1 1 3 3 3 0 Transposase zinc-binding domain MFS_1 PF07690.16 ORF87266 - 0.0024 16.9 11.1 0.011 14.7 11.1 1.8 1 1 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF87266 - 0.41 8.9 8.9 1.2 7.3 0.4 3.2 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Nitroreductase PF00881.24 ORF83415 - 5e-27 95.0 0.1 5.8e-27 94.8 0.1 1.0 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 ORF83415 - 0.0016 18.1 0.0 1.2 8.7 0.0 2.1 2 0 0 2 2 2 2 Putative TM nitroreductase DUF1980 PF09323.10 ORF8254 - 0.012 15.6 4.9 0.1 12.5 1.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) CDH-cyt PF16010.5 ORF79106 - 0.17 11.6 5.8 1.2 8.8 0.1 2.2 1 1 1 2 2 2 0 Cytochrome domain of cellobiose dehydrogenase PRR18 PF15671.5 ORF77938 - 1.6 8.6 7.8 0.068 13.0 2.5 1.4 2 0 0 2 2 2 0 Proline-rich protein family 18 SPC22 PF04573.12 ORF77041 - 9e-38 129.4 1.4 1.1e-37 129.2 1.4 1.1 1 0 0 1 1 1 1 Signal peptidase subunit DUF1664 PF07889.12 ORF76219 - 0.0018 18.3 3.7 0.0038 17.2 3.7 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF724 PF05266.14 ORF76219 - 0.0086 15.9 9.3 0.0086 15.9 9.3 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF724) Fib_alpha PF08702.10 ORF76219 - 0.029 14.5 4.4 0.029 14.5 4.4 3.2 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Hid1 PF12722.7 ORF76219 - 1.1 7.2 27.5 1.3 7.0 27.5 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF913 PF06025.12 ORF76219 - 1.9 7.4 14.8 2.4 7.1 14.8 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Glyco_transf_11 PF01531.16 ORF75035 - 0.0007 18.9 0.0 0.00092 18.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 11 GYR PF02756.14 ORF74814 - 0.83 9.4 3.3 1.6 8.5 3.3 1.5 1 0 0 1 1 1 0 GYR motif Thioredoxin_8 PF13905.6 ORF73618 - 0.0054 17.0 0.0 0.011 16.0 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF73618 - 0.047 13.0 0.0 0.058 12.7 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF73618 - 0.17 12.3 0.0 0.24 11.8 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain SGL PF08450.12 ORF71005 - 0.00076 19.1 0.0 0.0011 18.6 0.0 1.2 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 ORF71005 - 0.0036 17.5 0.0 0.0062 16.7 0.0 1.4 1 0 0 1 1 1 1 Arylesterase Pro_isomerase PF00160.21 ORF7067 - 3.8e-43 147.5 0.0 4.3e-43 147.3 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FAM163 PF15069.6 ORF65867 - 0.032 14.7 0.4 0.044 14.2 0.4 1.3 1 0 0 1 1 1 0 FAM163 family BC10 PF06726.12 ORF65777 - 0.01 16.0 0.2 0.01 16.0 0.2 2.1 2 0 0 2 2 2 0 Bladder cancer-related protein BC10 GSHPx PF00255.19 ORF63865 - 1.3e-36 124.4 1.5 1.8e-36 124.0 1.5 1.2 1 0 0 1 1 1 1 Glutathione peroxidase AhpC-TSA PF00578.21 ORF63865 - 2.6e-05 24.1 0.4 6.7e-05 22.8 0.4 1.8 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF63865 - 0.00066 19.4 0.4 0.011 15.4 0.4 2.1 1 1 0 1 1 1 1 Redoxin DUF3498 PF12004.8 ORF62394 - 0.078 12.2 1.8 0.09 12.0 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) Vezatin PF12632.7 ORF61466 - 0.015 14.7 2.8 0.019 14.4 2.8 1.2 1 0 0 1 1 1 0 Mysoin-binding motif of peroxisomes PseudoU_synth_2 PF00849.22 ORF6129 - 2.7e-17 63.3 0.0 3.2e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase ACAS_N PF16177.5 ORF5770 - 0.16 11.9 0.3 0.3 11.0 0.3 1.4 1 0 0 1 1 1 0 Acetyl-coenzyme A synthetase N-terminus MORN PF02493.20 ORF55737 - 1.6e-42 140.9 48.6 6.7e-09 35.1 1.3 8.3 8 0 0 8 8 8 8 MORN repeat DcuC PF03606.15 ORF51110 - 4.9e-53 180.2 21.6 5.5e-53 180.1 21.6 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier CitMHS PF03600.16 ORF51110 - 3.6e-07 29.7 20.0 4e-07 29.5 20.0 1.0 1 0 0 1 1 1 1 Citrate transporter DctM PF06808.12 ORF51110 - 4.5e-05 22.5 18.0 5.1e-05 22.3 18.0 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component Na_H_antiporter PF03553.14 ORF51110 - 0.00013 21.4 16.1 0.00014 21.2 16.1 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter family MgtE PF01769.16 ORF51110 - 0.0066 16.8 5.3 0.0066 16.8 5.3 2.2 2 0 0 2 2 2 1 Divalent cation transporter Pkinase PF00069.25 ORF48819 - 7.2e-27 94.4 0.0 8.3e-27 94.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF48819 - 0.038 13.3 0.0 0.048 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase PQ-loop PF04193.14 ORF4855 - 1.7e-16 59.7 4.3 3.2e-15 55.6 0.2 2.6 2 0 0 2 2 2 2 PQ loop repeat Nucleolin_bd PF16725.5 ORF4855 - 0.038 13.7 0.0 0.064 12.9 0.0 1.3 1 0 0 1 1 1 0 Nucleolin binding domain PseudoU_synth_2 PF00849.22 ORF48068 - 2.8e-17 63.3 0.0 3.7e-17 62.9 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase P_C10 PF14974.6 ORF47990 - 0.00037 20.5 0.0 0.00058 19.9 0.0 1.3 1 0 0 1 1 1 1 Protein C10 WD40 PF00400.32 ORF44961 - 8.9e-05 23.2 0.6 0.96 10.4 0.0 3.6 3 1 1 4 4 4 2 WD domain, G-beta repeat Longin PF13774.6 ORF43744 - 1.4e-06 28.3 0.2 2.5e-06 27.4 0.1 1.5 1 1 0 1 1 1 1 Regulated-SNARE-like domain Synaptobrevin PF00957.21 ORF43744 - 0.00074 19.3 5.2 0.00074 19.3 5.2 1.5 2 0 0 2 2 2 1 Synaptobrevin DUF2175 PF09943.9 ORF43744 - 0.13 12.6 4.9 0.86 9.9 4.7 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) DNA_gyraseA_C PF03989.13 ORF43332 - 0.16 11.5 0.0 0.33 10.5 0.0 1.5 1 0 0 1 1 1 0 DNA gyrase C-terminal domain, beta-propeller DUF3970 PF13113.6 ORF43332 - 1.5 9.1 4.1 1.2 9.4 0.9 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3970) T6SS_VasJ PF16989.5 ORF40989 - 0.092 12.2 0.1 0.78 9.2 0.0 2.0 1 1 1 2 2 2 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ T6SS_VasJ PF16989.5 ORF40982 - 0.092 12.2 0.1 0.78 9.2 0.0 2.0 1 1 1 2 2 2 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ CDH-cyt PF16010.5 ORF39881 - 0.17 11.6 5.8 1.2 8.8 0.1 2.2 1 1 1 2 2 2 0 Cytochrome domain of cellobiose dehydrogenase DUF1082 PF06449.11 ORF38134 - 0.14 12.0 0.2 0.27 11.1 0.2 1.4 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) PA26 PF04636.13 ORF37379 - 0.039 12.9 0.0 0.044 12.7 0.0 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) Tmemb_9 PF05434.11 ORF37379 - 0.1 12.5 0.2 0.15 11.9 0.2 1.3 1 0 0 1 1 1 0 TMEM9 OAD_gamma PF04277.13 ORF37379 - 0.1 13.2 0.0 0.2 12.3 0.0 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain cNMP_binding PF00027.29 ORF34959 - 9.6e-06 25.6 0.0 1.9e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MRJP PF03022.16 ORF34959 - 0.11 11.9 0.5 0.28 10.5 0.6 1.5 2 0 0 2 2 2 0 Major royal jelly protein DUF4913 PF16259.5 ORF31116 - 0.071 13.2 5.7 0.13 12.3 5.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4913) Zip PF02535.22 ORF29459 - 0.024 13.9 3.8 0.038 13.2 3.8 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter Hid1 PF12722.7 ORF29459 - 0.067 11.3 3.0 0.079 11.1 3.0 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF2992 PF11208.8 ORF29459 - 0.077 13.2 10.7 0.11 12.8 10.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) PIEZO PF15917.5 ORF29459 - 0.18 11.3 6.1 0.26 10.7 6.1 1.2 1 0 0 1 1 1 0 Piezo Presenilin PF01080.17 ORF29459 - 0.25 10.1 4.0 0.28 9.9 4.0 1.1 1 0 0 1 1 1 0 Presenilin Neur_chan_memb PF02932.16 ORF29459 - 0.26 11.3 2.0 0.31 11.1 2.0 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3506 PF12014.8 ORF29459 - 1.5 8.8 5.2 6 6.9 4.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF3506) ALMT PF11744.8 ORF29459 - 5.2 5.8 6.0 6.2 5.5 6.0 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF4732 PF15876.5 ORF28617 - 0.055 13.6 0.1 0.079 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4732) DUF5040 PF16443.5 ORF20499 - 0.15 11.5 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5040) SLX9 PF15341.6 ORF20127 - 0.99 9.8 10.2 2.1 8.7 10.3 1.8 1 1 0 1 1 1 0 Ribosome biogenesis protein SLX9 HyaE PF07449.11 ORF19533 - 1.4e-43 147.2 0.0 1.8e-43 146.9 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE DUF3530 PF12048.8 ORF19533 - 0.16 11.4 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) PDZ_2 PF13180.6 ORF18439 - 3.5e-09 36.8 0.1 9.1e-09 35.5 0.0 1.7 2 0 0 2 2 2 1 PDZ domain Nas2_N PF18265.1 ORF18439 - 2e-07 30.8 1.0 5.5e-07 29.4 1.0 1.7 1 0 0 1 1 1 1 Nas2 N_terminal domain PDZ_6 PF17820.1 ORF18439 - 3.7e-07 29.9 1.2 6.4e-07 29.1 0.1 2.1 3 0 0 3 3 3 1 PDZ domain PDZ PF00595.24 ORF18439 - 8.4e-06 26.1 0.2 1.9e-05 24.9 0.1 1.7 2 0 0 2 2 2 1 PDZ domain GRASP55_65 PF04495.14 ORF18439 - 7e-05 23.2 0.0 0.00014 22.2 0.0 1.5 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain DUF952 PF06108.12 ORF1727 - 0.021 14.8 0.0 0.031 14.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF952) DUF4434 PF14488.6 ORF16486 - 0.096 12.7 0.0 2.6 8.0 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4434) MORN PF02493.20 ORF16486 - 2.4 8.2 5.3 0.67 10.0 0.5 2.6 3 0 0 3 3 3 0 MORN repeat zf-4CXXC_R1 PF10497.9 ORF15852 - 0.16 12.2 13.8 4.6 7.5 13.8 2.4 1 1 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 CHCH PF06747.13 ORF151050 - 0.0092 16.1 4.7 0.013 15.6 4.7 1.3 1 0 0 1 1 1 1 CHCH domain zf-LITAF-like PF10601.9 ORF144288 - 5.6e-16 58.6 15.4 8.1e-16 58.1 15.4 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain zinc_ribbon_2 PF13240.6 ORF144288 - 0.074 12.8 5.0 0.31 10.8 0.4 2.7 2 0 0 2 2 2 0 zinc-ribbon domain Sgf11 PF08209.11 ORF144288 - 0.24 11.0 6.0 1 8.9 2.3 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) DUF3700 PF12481.8 ORF143738 - 0.06 12.8 0.0 0.085 12.3 0.0 1.2 1 0 0 1 1 1 0 Aluminium induced protein Cpta_toxin PF07254.12 ORF143446 - 0.11 12.5 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system CFC PF09443.10 ORF142086 - 0.77 9.7 7.5 1.6 8.6 7.5 1.5 1 0 0 1 1 1 0 Cripto_Frl-1_Cryptic (CFC) DUF4381 PF14316.6 ORF141959 - 0.025 14.8 1.0 0.057 13.7 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) PET117 PF15786.5 ORF141959 - 0.045 14.0 0.1 34 4.8 3.7 2.5 2 1 0 2 2 2 0 PET assembly of cytochrome c oxidase, mitochondrial PsbY PF06298.11 ORF141959 - 0.092 12.7 0.2 0.16 11.9 0.2 1.4 1 0 0 1 1 1 0 Photosystem II protein Y (PsbY) NP1-WLL PF11733.8 ORF141142 - 0.59 9.9 5.6 1 9.1 5.6 1.4 1 0 0 1 1 1 0 Non-capsid protein NP1 CRIC_ras_sig PF10534.9 ORF133603 - 0.11 12.7 0.7 0.18 12.0 0.3 1.6 2 0 0 2 2 2 0 Connector enhancer of kinase suppressor of ras EIF_2_alpha PF07541.12 ORF131879 - 0.022 14.9 1.3 0.6 10.2 0.4 2.3 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 2 alpha subunit DUF3959 PF13105.6 ORF131879 - 0.52 9.8 3.1 1 8.8 3.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Lentivirus_VIF PF05851.11 ORF131530 - 0.37 9.7 9.3 0.068 12.1 3.3 2.0 1 1 0 2 2 2 0 Lentivirus virion infectivity factor (VIF) CarbpepA_inh PF02977.15 ORF131530 - 0.88 9.4 8.3 14 5.6 0.6 3.6 3 0 0 3 3 3 0 Carboxypeptidase A inhibitor zf-P11 PF03854.14 ORF131530 - 1.1 9.0 8.4 3.7 7.3 0.3 3.6 4 0 0 4 4 4 0 P-11 zinc finger HAD_2 PF13419.6 ORF131201 - 3.8e-20 72.7 0.0 4.7e-20 72.4 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF131201 - 3.1e-14 53.8 0.0 5.9e-14 52.8 0.0 1.4 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF131201 - 4.4e-07 29.9 0.0 7.6e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 ORF131201 - 6.8e-05 23.3 0.0 0.00017 22.0 0.0 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 ORF131201 - 0.02 14.3 0.0 0.028 13.8 0.0 1.1 1 0 0 1 1 1 0 Putative Phosphatase LemA PF04011.12 ORF130849 - 0.41 10.5 8.9 0.059 13.2 2.2 2.0 2 0 0 2 2 2 0 LemA family SlyX PF04102.12 ORF130849 - 2.9 8.6 7.4 32 5.2 0.0 3.9 2 2 2 4 4 4 0 SlyX RTTN_N PF14726.6 ORF12987 - 0.24 12.2 3.8 4.4 8.2 0.2 2.2 2 0 0 2 2 2 0 Rotatin, an armadillo repeat protein, centriole functioning CUT PF02376.15 ORF129705 - 0.11 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 CUT domain bZIP_C PF12498.8 ORF12954 - 0.029 15.3 1.2 1.6 9.8 0.1 2.1 2 0 0 2 2 2 0 Basic leucine-zipper C terminal BAR_3 PF16746.5 ORF12954 - 0.044 13.5 0.0 0.36 10.5 0.0 1.9 2 0 0 2 2 2 0 BAR domain of APPL family Nitrate_red_del PF02613.15 ORF128837 - 1.6e-14 54.1 0.4 2.1e-14 53.7 0.4 1.2 1 0 0 1 1 1 1 Nitrate reductase delta subunit Myb_DNA-bind_4 PF13837.6 ORF125186 - 1 9.8 6.9 6.6 7.2 4.2 2.9 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain ArfGap PF01412.18 ORF120551 - 7.5 6.7 8.7 1.3 9.2 3.6 2.0 1 1 1 2 2 2 0 Putative GTPase activating protein for Arf Sulfatase PF00884.23 ORF117930 - 5e-26 91.8 0.4 5.6e-26 91.6 0.4 1.0 1 0 0 1 1 1 1 Sulfatase Slx4 PF09494.10 ORF117662 - 1.3e-06 28.3 0.0 1.9e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Slx4 endonuclease PHM7_cyt PF14703.6 ORF117662 - 0.056 13.7 5.8 0.071 13.3 5.8 1.2 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter KIP1 PF07765.12 ORF117662 - 0.096 12.8 1.5 0.17 12.0 1.5 1.4 1 0 0 1 1 1 0 KIP1-like protein Pkinase PF00069.25 ORF114675 - 1.7e-55 188.2 0.3 1.8e-55 188.1 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF114675 - 4.6e-29 101.5 0.1 4.8e-29 101.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF114675 - 1.6e-05 24.3 0.0 2.3e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF114675 - 0.00025 20.1 0.4 0.0003 19.9 0.4 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF114675 - 0.00063 19.1 0.0 0.00083 18.8 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF114675 - 0.049 13.5 0.0 0.2 11.5 0.0 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family zf-Tim10_DDP PF02953.15 ORF11356 - 0.071 12.8 0.1 0.18 11.5 0.1 1.7 1 0 0 1 1 1 0 Tim10/DDP family zinc finger PH_RBD PF12068.8 ORF11356 - 0.11 11.9 0.1 0.16 11.5 0.1 1.2 1 0 0 1 1 1 0 Rab-binding domain (RBD) REV PF00424.18 ORF112704 - 0.13 12.3 0.1 0.26 11.4 0.1 1.5 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) MCRS_N PF13325.6 ORF111884 - 0.055 13.5 0.1 0.076 13.0 0.1 1.1 1 0 0 1 1 1 0 N-terminal region of micro-spherule protein Pex24p PF06398.11 ORF111884 - 0.082 11.9 0.3 0.096 11.7 0.3 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Neuropep_like PF15161.6 ORF111884 - 0.13 12.0 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Neuropeptide-like DUF192 PF02643.15 ORF10994 - 0.32 11.2 6.6 27 5.0 0.0 3.2 1 1 0 2 2 2 0 Uncharacterized ACR, COG1430 Fib_alpha PF08702.10 ORF109477 - 0.0068 16.6 5.5 0.0068 16.6 5.5 1.8 1 1 1 2 2 2 1 Fibrinogen alpha/beta chain family SPATA24 PF15175.6 ORF109477 - 0.019 14.8 4.2 0.035 14.0 4.2 1.5 1 0 0 1 1 1 0 Spermatogenesis-associated protein 24 PKcGMP_CC PF16808.5 ORF109477 - 0.023 14.5 4.8 0.26 11.2 4.5 2.6 1 1 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase SurA_N_2 PF13623.6 ORF109477 - 0.029 14.2 1.9 0.052 13.4 0.0 2.2 2 1 0 2 2 2 0 SurA N-terminal domain TPD52 PF04201.15 ORF109477 - 0.041 13.5 0.4 0.072 12.7 0.4 1.4 1 0 0 1 1 1 0 Tumour protein D52 family SurA_N_3 PF13624.6 ORF109477 - 0.058 13.2 0.4 0.15 11.8 0.0 1.9 1 1 1 2 2 2 0 SurA N-terminal domain XLF PF09302.11 ORF109477 - 0.079 13.1 3.8 0.15 12.2 3.8 1.4 1 0 0 1 1 1 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component DUF641 PF04859.12 ORF109477 - 0.4 11.0 5.3 0.15 12.4 2.5 1.7 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) Tropomyosin_1 PF12718.7 ORF109477 - 0.62 10.2 9.0 3.5 7.8 5.5 2.3 2 1 0 2 2 2 0 Tropomyosin like Oberon_cc PF16312.5 ORF109477 - 1 9.3 7.6 0.14 12.1 3.3 1.7 2 1 0 2 2 2 0 Coiled-coil region of Oberon HMMR_N PF15905.5 ORF109477 - 1.7 8.0 12.6 0.3 10.5 7.6 1.9 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF4041 PF13250.6 ORF109264 - 0.59 10.0 2.7 0.59 10.0 0.1 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4041) zf-RING_2 PF13639.6 ORF108606 - 1.4e-12 47.7 13.7 2.2e-12 47.1 13.7 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF108606 - 9.2e-08 31.8 9.0 1.8e-07 30.9 9.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF108606 - 1.6e-07 30.9 12.9 3.2e-07 30.0 12.9 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF108606 - 6.3e-07 29.6 13.2 1.8e-06 28.1 13.2 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF108606 - 1.4e-05 25.0 6.0 2.4e-05 24.3 6.0 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF108606 - 2.2e-05 24.4 6.9 2.2e-05 24.4 6.9 1.9 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF108606 - 4e-05 23.4 13.6 6.6e-05 22.7 13.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF108606 - 6.4e-05 22.8 11.4 0.0001 22.2 11.4 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF108606 - 0.00016 21.4 14.4 0.00029 20.6 14.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Baculo_RING PF05883.11 ORF108606 - 0.0036 17.3 1.2 0.0051 16.8 1.2 1.3 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-RING_4 PF14570.6 ORF108606 - 0.0038 17.0 8.5 0.0063 16.3 8.5 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain CTU2 PF10288.9 ORF108606 - 0.026 14.8 1.5 0.47 10.7 1.6 2.1 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 RINGv PF12906.7 ORF108606 - 0.076 13.1 12.3 0.14 12.3 12.3 1.4 1 0 0 1 1 1 0 RING-variant domain Rad50_zn_hook PF04423.14 ORF108606 - 0.12 12.3 0.5 1.3 9.0 0.0 2.5 3 0 0 3 3 3 0 Rad50 zinc hook motif FANCL_C PF11793.8 ORF108606 - 0.22 11.7 9.7 2.7 8.2 9.7 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF108606 - 0.24 11.3 10.7 0.48 10.3 10.7 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 DUF4381 PF14316.6 ORF105544 - 0.025 14.8 1.0 0.057 13.7 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) PET117 PF15786.5 ORF105544 - 0.045 14.0 0.1 34 4.8 3.7 2.5 2 1 0 2 2 2 0 PET assembly of cytochrome c oxidase, mitochondrial PsbY PF06298.11 ORF105544 - 0.092 12.7 0.2 0.16 11.9 0.2 1.4 1 0 0 1 1 1 0 Photosystem II protein Y (PsbY) Saf_2TM PF18303.1 ORF104662 - 0.37 10.4 1.0 0.58 9.7 1.0 1.3 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain DUF4661 PF15576.6 ORF103707 - 0.29 11.0 1.5 0.35 10.8 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) SurA_N_3 PF13624.6 ORF103069 - 0.06 13.1 0.8 0.076 12.8 0.8 1.1 1 0 0 1 1 1 0 SurA N-terminal domain FinO_N PF12602.8 ORF103069 - 0.4 11.0 5.9 6.1 7.2 0.0 2.4 1 1 1 2 2 2 0 Fertility inhibition protein N terminal MPM1 PF17234.2 ORF102623 - 0.36 11.1 10.5 0.56 10.5 10.5 1.3 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 3HCDH_N PF02737.18 ORF102623 - 0.88 9.4 3.6 1.6 8.6 3.4 1.5 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALMT PF11744.8 ORF102623 - 2.2 7.0 9.7 2.7 6.7 9.7 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter MTTB PF06253.11 ORF102231 - 0.24 9.3 0.1 0.34 8.8 0.1 1.1 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) HIF-1a_CTAD PF08778.10 ORF101597 - 0.094 12.4 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 HIF-1 alpha C terminal transactivation domain HTH_26 PF13443.6 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_1 - 0.0069 16.8 0.6 4.4 7.8 0.1 3.5 3 1 0 4 4 4 2 Cro/C1-type HTH DNA-binding domain Crp PF00325.20 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_1 - 0.014 15.1 5.2 6.7 6.5 0.7 3.3 3 0 0 3 3 3 0 Bacterial regulatory proteins, crp family CARD_2 PF16739.5 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_1 - 0.19 11.8 0.0 25 4.9 0.0 3.3 3 2 0 3 3 3 0 Caspase recruitment domain HTH_IclR PF09339.10 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_1 - 0.93 9.4 6.9 13 5.7 0.2 3.1 3 0 0 3 3 3 0 IclR helix-turn-helix domain Get5_C PF18514.1 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_1 - 5.4 6.8 4.5 6.7 6.5 0.1 2.8 3 0 0 3 3 3 0 Get5 C-terminal domain ALF PF03752.13 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_1 - 0.019 14.9 0.1 6.5 6.8 0.0 3.5 4 0 0 4 4 4 0 Short repeats of unknown function CARD_2 PF16739.5 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_1 - 0.084 12.9 0.0 15 5.6 0.0 2.4 2 0 0 2 2 2 0 Caspase recruitment domain DMPK_coil PF08826.10 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_1 - 0.093 12.9 0.0 44 4.3 0.0 3.7 4 0 0 4 4 4 0 DMPK coiled coil domain like CDC50 PF03381.15 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_1 - 0.11 12.1 0.9 4.7 6.6 0.1 2.1 2 0 0 2 2 2 0 LEM3 (ligand-effect modulator 3) family / CDC50 family MRF_C1 PF13887.6 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_1 - 3.3 7.0 5.9 71 2.7 0.1 3.3 3 0 0 3 3 3 0 Myelin gene regulatory factor -C-terminal domain 1 Herpes_UL33 PF03581.13 NODE_38546_length_547_cov_503.835938_g31206_i0forward_frame_1 - 0.14 12.6 2.5 0.7 10.3 2.5 2.2 1 1 0 1 1 1 0 Herpesvirus UL33-like protein UvrD-helicase PF00580.21 NODE_38534_length_548_cov_2.807018_g31196_i0reverse_frame_1 - 4.4e-31 108.6 0.0 5.2e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 NODE_38534_length_548_cov_2.807018_g31196_i0reverse_frame_1 - 3.1e-10 40.6 0.0 4.5e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_38534_length_548_cov_2.807018_g31196_i0reverse_frame_1 - 0.084 12.6 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain ESF1 PF18209.1 NODE_38534_length_548_cov_2.807018_g31196_i0forward_frame_1 - 2.2 8.2 7.1 10 6.1 4.4 2.4 2 0 0 2 2 2 0 Embryo surrounding factor 1 FAD_syn PF06574.12 NODE_38531_length_548_cov_3.801170_g31193_i0reverse_frame_1 - 2e-40 138.3 0.0 2.4e-40 138.0 0.0 1.1 1 0 0 1 1 1 1 FAD synthetase CTP_transf_like PF01467.26 NODE_38531_length_548_cov_3.801170_g31193_i0reverse_frame_1 - 0.016 15.4 0.0 0.023 14.9 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase-like SAPS PF04499.15 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 0.42 9.3 9.2 0.44 9.3 9.2 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF4407 PF14362.6 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 2.3 7.5 8.7 2.8 7.2 8.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AAA_18 PF13238.6 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 3 8.4 8.2 5.8 7.5 6.6 2.2 1 1 1 2 2 2 0 AAA domain DNA_pol_phi PF04931.13 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 4.6 5.2 21.9 6.1 4.8 21.9 1.1 1 0 0 1 1 1 0 DNA polymerase phi RR_TM4-6 PF06459.12 NODE_38514_length_548_cov_88.341131_g31177_i0reverse_frame_1 - 9.3 6.0 16.5 2.3 8.0 12.4 1.7 1 1 0 1 1 1 0 Ryanodine Receptor TM 4-6 UL11 PF11094.8 NODE_38512_length_548_cov_95.906433_g31175_i0reverse_frame_1 - 0.14 12.0 2.1 0.39 10.6 2.1 1.7 1 0 0 1 1 1 0 Membrane-associated tegument protein DOT1 PF08123.13 NODE_38512_length_548_cov_95.906433_g31175_i0forward_frame_1 - 0.0069 15.9 0.0 0.019 14.5 0.0 1.6 1 1 0 1 1 1 1 Histone methylation protein DOT1 PseudoU_synth_2 PF00849.22 NODE_38509_length_548_cov_124.224172_g31172_i0forward_frame_1 - 3.7e-12 46.6 0.0 5.2e-12 46.1 0.0 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase Autotransporter PF03797.19 NODE_38488_length_549_cov_2.180934_g31153_i0forward_frame_1 - 1.5e-31 110.0 16.8 1.7e-31 109.8 16.8 1.0 1 0 0 1 1 1 1 Autotransporter beta-domain YfaZ PF07437.11 NODE_38488_length_549_cov_2.180934_g31153_i0forward_frame_1 - 0.014 15.1 0.2 0.02 14.5 0.2 1.3 1 0 0 1 1 1 0 YfaZ precursor DUF3575 PF12099.8 NODE_38488_length_549_cov_2.180934_g31153_i0forward_frame_1 - 0.06 12.7 3.7 0.14 11.4 0.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3575) DUF4801 PF16059.5 NODE_38485_length_549_cov_3.206226_g31150_i0reverse_frame_1 - 1.1 9.3 9.7 25 4.9 9.7 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4801) HTH_38 PF13936.6 NODE_38481_length_549_cov_4.334630_g31146_i0forward_frame_1 - 0.15 11.9 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain RGS12_usC PF16612.5 NODE_38464_length_549_cov_115.293774_g31130_i0forward_frame_1 - 1.2 9.5 11.9 0.077 13.4 3.0 2.4 1 1 2 3 3 3 0 C-terminal unstructured region of RGS12 Phtf-FEM1B_bdg PF12129.8 NODE_38455_length_549_cov_198.429961_g31122_i0reverse_frame_1 - 0.11 12.3 2.0 1.3 8.8 0.1 2.1 2 0 0 2 2 2 0 Male germ-cell putative homeodomain transcription factor Histone_H2A_C PF16211.5 NODE_38452_length_549_cov_222.392996_g31119_i0forward_frame_1 - 0.15 11.8 0.4 0.4 10.5 0.4 1.8 1 0 0 1 1 1 0 C-terminus of histone H2A LsmAD PF06741.13 NODE_38435_length_550_cov_2.083495_g31106_i0reverse_frame_3 - 1.2 9.7 5.1 2.5 8.7 5.1 1.5 1 1 0 1 1 1 0 LsmAD domain DUF1403 PF07183.11 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_3 - 0.11 12.0 0.1 0.18 11.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1403) Glyco_hydro_98M PF08306.11 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_3 - 0.15 11.4 0.1 0.19 11.0 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 98 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks131.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks131.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks131.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks131.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ABC_tran PF00005.27 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 5.2e-34 117.7 0.0 6.1e-34 117.5 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.00014 22.2 0.0 0.00053 20.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.00024 20.9 0.0 0.00028 20.7 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.00024 21.0 0.0 0.00039 20.4 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.00061 19.5 0.0 0.0011 18.7 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.0011 19.4 0.0 0.0013 19.2 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.0011 18.8 0.0 0.0017 18.2 0.0 1.3 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF87 PF01935.17 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.0035 17.4 0.0 0.0046 17.1 0.0 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_23 PF13476.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.0051 17.3 0.0 0.0094 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.01 15.8 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.011 15.9 0.0 0.018 15.2 0.0 1.4 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.02 14.6 0.1 0.039 13.7 0.0 1.5 2 0 0 2 2 1 0 IstB-like ATP binding protein ATP-synt_ab PF00006.25 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.022 14.4 0.0 0.033 13.8 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.023 14.4 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.03 13.8 0.0 0.057 12.9 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.04 13.3 0.0 0.054 12.9 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_10 PF12846.7 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.049 12.5 0.0 0.062 12.2 0.0 1.3 1 1 0 1 1 1 0 AAA-like domain RNA_helicase PF00910.22 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.055 13.9 0.1 0.088 13.2 0.1 1.6 1 1 0 1 1 1 0 RNA helicase DUF2813 PF11398.8 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.077 12.2 0.0 0.15 11.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2813) G-alpha PF00503.20 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.082 12.1 0.0 0.096 11.8 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_18 PF13238.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.095 13.3 0.3 0.71 10.4 0.3 2.0 1 1 1 2 2 2 0 AAA domain AAA_5 PF07728.14 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.11 12.5 0.1 0.19 11.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA PF00004.29 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.15 12.5 0.0 0.31 11.5 0.0 1.6 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.6 NODE_38433_length_550_cov_2.530097_g31104_i0forward_frame_2 - 0.16 10.6 0.0 0.21 10.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF4364 PF14277.6 NODE_38431_length_550_cov_2.864078_g31102_i0reverse_frame_2 - 0.07 12.9 0.6 0.098 12.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) TMEM171 PF15471.6 NODE_38425_length_550_cov_64.143689_g31092_i1forward_frame_3 - 0.41 9.6 5.7 0.46 9.4 5.1 1.4 1 1 0 1 1 1 0 Transmembrane protein family 171 FtsX PF02687.21 NODE_38423_length_550_cov_67.448544_g31095_i0reverse_frame_3 - 1 9.9 11.8 0.12 12.9 6.0 2.2 2 0 0 2 2 2 0 FtsX-like permease family Granin PF01271.17 NODE_38422_length_550_cov_75.289320_g31094_i0reverse_frame_3 - 0.03 13.3 18.3 0.034 13.1 18.3 1.1 1 0 0 1 1 1 0 Granin (chromogranin or secretogranin) WW PF00397.26 NODE_38422_length_550_cov_75.289320_g31094_i0reverse_frame_2 - 0.0072 16.4 0.1 0.018 15.1 0.1 1.7 1 0 0 1 1 1 1 WW domain TMEM171 PF15471.6 NODE_38420_length_550_cov_83.137864_g31092_i0reverse_frame_3 - 0.01 14.8 4.6 0.016 14.2 4.6 1.4 1 0 0 1 1 1 0 Transmembrane protein family 171 BAR_3_WASP_bdg PF10456.9 NODE_38418_length_550_cov_85.299029_g31090_i0reverse_frame_3 - 0.1 12.1 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein D123 PF07065.14 NODE_38414_length_550_cov_104.815534_g31086_i0forward_frame_3 - 1e-13 51.1 0.0 1.2e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 D123 R2K_3 PF14243.6 NODE_38414_length_550_cov_104.815534_g31086_i0forward_frame_3 - 0.00042 20.4 0.0 0.00055 20.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 3 R2K_2 PF18299.1 NODE_38414_length_550_cov_104.815534_g31086_i0forward_frame_3 - 0.00066 19.6 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 2 ST7 PF04184.12 NODE_38407_length_550_cov_201.891262_g29529_i1reverse_frame_2 - 0.32 9.4 2.4 0.4 9.1 2.4 1.1 1 0 0 1 1 1 0 ST7 protein NPV_P10 PF05531.12 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.069 13.6 1.4 0.21 12.1 1.1 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF507 PF04368.13 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.18 11.7 10.0 0.3 11.0 8.9 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF507) Cid2 PF09774.9 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.41 11.1 6.9 0.18 12.2 4.2 1.7 1 1 0 2 2 2 0 Caffeine-induced death protein 2 ACR_tran PF00873.19 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.45 8.1 4.5 0.49 8.0 4.5 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF1604 PF07713.13 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 0.45 10.4 2.6 1.2 9.0 2.6 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) Syntaxin_2 PF14523.6 NODE_38407_length_550_cov_201.891262_g29529_i1forward_frame_3 - 2.8 8.4 11.1 1.9 8.9 4.4 2.4 1 1 0 2 2 2 0 Syntaxin-like protein S4 PF01479.25 NODE_38403_length_550_cov_272.209709_g31076_i0forward_frame_3 - 0.055 13.2 0.2 0.11 12.2 0.2 1.6 1 0 0 1 1 1 0 S4 domain PRKCSH_1 PF13015.6 NODE_38403_length_550_cov_272.209709_g31076_i0forward_frame_2 - 1.8e-12 47.2 0.0 2.7e-12 46.6 0.0 1.3 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein PRKCSH PF07915.13 NODE_38403_length_550_cov_272.209709_g31076_i0forward_frame_2 - 2.7e-05 25.1 0.4 5.9e-05 24.0 0.4 1.6 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein ATG27 PF09451.10 NODE_38403_length_550_cov_272.209709_g31076_i0forward_frame_2 - 0.00011 22.2 0.7 0.00013 21.9 0.7 1.1 1 0 0 1 1 1 1 Autophagy-related protein 27 Ricin_B_lectin PF00652.22 NODE_38401_length_550_cov_331.044660_g31074_i0forward_frame_2 - 8.4e-11 42.2 2.0 1.5e-10 41.4 2.0 1.4 1 1 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 NODE_38401_length_550_cov_331.044660_g31074_i0forward_frame_2 - 3.1e-05 24.6 0.0 6.4e-05 23.6 0.0 1.5 2 0 0 2 2 2 1 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 NODE_38401_length_550_cov_331.044660_g31074_i0forward_frame_2 - 0.024 14.2 0.2 0.046 13.3 0.2 1.5 1 1 0 1 1 1 0 Cytolethal distending toxin A/C domain RapH_N PF18801.1 NODE_38400_length_550_cov_504.959223_g31073_i0reverse_frame_2 - 0.15 12.2 2.0 0.55 10.4 0.3 2.6 2 0 0 2 2 2 0 response regulator aspartate phosphatase H, N terminal ASC PF00858.24 NODE_38400_length_550_cov_504.959223_g31073_i0reverse_frame_2 - 1.1 8.2 10.9 1.2 8.0 10.9 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel Paramyxo_ncap PF00973.19 NODE_38400_length_550_cov_504.959223_g31073_i0reverse_frame_2 - 2.8 6.8 12.8 3.8 6.3 12.8 1.2 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Zip PF02535.22 NODE_38400_length_550_cov_504.959223_g31073_i0reverse_frame_2 - 7.4 5.7 5.2 7.5 5.7 5.2 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Cas9_PI2 PF18070.1 NODE_38390_length_551_cov_2.517442_g31065_i0reverse_frame_3 - 0.014 16.1 2.8 0.062 14.0 0.3 2.6 2 0 0 2 2 2 0 CRISPR-Cas9 PI domain Pkinase PF00069.25 NODE_38384_length_551_cov_2.994186_g31059_i0reverse_frame_3 - 1.8e-09 37.4 0.1 2.5e-09 36.9 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_38384_length_551_cov_2.994186_g31059_i0reverse_frame_3 - 0.0086 15.4 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_8 PF13833.6 NODE_38372_length_551_cov_70.335271_g31048_i0reverse_frame_2 - 0.00019 21.2 0.0 0.00032 20.5 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_38372_length_551_cov_70.335271_g31048_i0reverse_frame_2 - 0.065 13.2 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 NODE_38372_length_551_cov_70.335271_g31048_i0reverse_frame_2 - 0.13 11.9 0.1 0.24 11.0 0.1 1.5 1 0 0 1 1 1 0 EF hand ZZ PF00569.17 NODE_38368_length_551_cov_91.071705_g31044_i0reverse_frame_3 - 0.011 15.5 0.4 0.11 12.4 0.1 2.6 2 0 0 2 2 2 0 Zinc finger, ZZ type UPF0547 PF10571.9 NODE_38368_length_551_cov_91.071705_g31044_i0reverse_frame_3 - 0.15 12.1 7.8 0.65 10.1 0.2 4.2 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 Ank_4 PF13637.6 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 3e-31 107.4 6.3 3.7e-08 33.7 0.1 4.0 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 1.2e-28 99.6 1.0 3.6e-14 53.1 0.3 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 1.1e-21 76.2 5.2 2.4e-05 24.6 0.1 5.2 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 2.8e-19 67.2 0.5 0.0006 20.1 0.0 5.3 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 NODE_38368_length_551_cov_91.071705_g31044_i0forward_frame_3 - 5.7e-19 67.9 4.7 1.1e-05 25.7 0.0 4.7 1 1 4 5 5 5 4 Ankyrin repeats (many copies) SRP40_C PF05022.12 NODE_38364_length_551_cov_123.963178_g31040_i0reverse_frame_3 - 0.9 10.4 5.3 1.6 9.7 5.3 1.4 1 0 0 1 1 1 0 SRP40, C-terminal domain Glyco_hydro_8 PF01270.17 NODE_38331_length_552_cov_2.698259_g31012_i0forward_frame_3 - 0.042 12.7 0.0 0.055 12.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 8 PhoLip_ATPase_C PF16212.5 NODE_38331_length_552_cov_2.698259_g31012_i0forward_frame_3 - 9.2 5.9 14.0 0.23 11.2 0.5 2.9 2 1 1 3 3 3 0 Phospholipid-translocating P-type ATPase C-terminal HipN PF18253.1 NODE_38331_length_552_cov_2.698259_g31012_i0forward_frame_2 - 0.3 10.8 3.5 1.3 8.7 1.7 2.5 2 1 0 2 2 2 0 Hsp70-interacting protein N N-terminal domain PHM7_cyt PF14703.6 NODE_38329_length_552_cov_2.851064_g31010_i0reverse_frame_3 - 0.0058 16.9 0.1 0.0088 16.3 0.1 1.2 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter Ish1 PF10281.9 NODE_38329_length_552_cov_2.851064_g31010_i0reverse_frame_3 - 0.051 13.9 0.0 0.13 12.6 0.0 1.7 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein BRCT PF00533.26 NODE_38329_length_552_cov_2.851064_g31010_i0reverse_frame_3 - 0.07 13.5 0.1 0.16 12.4 0.1 1.6 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain MFS_1 PF07690.16 NODE_38328_length_552_cov_3.032882_g31009_i0reverse_frame_3 - 1.9e-15 56.7 15.4 2.3e-15 56.4 15.4 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 NODE_38328_length_552_cov_3.032882_g31009_i0reverse_frame_3 - 0.0065 14.8 1.9 0.0076 14.6 1.9 1.1 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family Paramecium_SA PF01508.16 NODE_38328_length_552_cov_3.032882_g31009_i0reverse_frame_2 - 0.084 13.3 1.5 0.13 12.7 1.5 1.3 1 0 0 1 1 1 0 Paramecium surface antigen domain zf-RING_2 PF13639.6 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 5.6e-09 36.2 9.8 5.6e-09 36.2 9.8 3.1 3 0 0 3 3 3 1 Ring finger domain zf-rbx1 PF12678.7 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 4.8e-08 33.2 7.4 4.8e-08 33.2 7.4 2.5 3 0 0 3 3 3 1 RING-H2 zinc finger domain Zn_ribbon_17 PF17120.5 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 5.5e-06 25.9 6.2 5.5e-06 25.9 6.2 2.6 3 0 0 3 3 2 1 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 2.2e-05 24.2 9.1 2.2e-05 24.2 9.1 2.8 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.0007 19.4 7.6 0.0007 19.4 7.6 3.0 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.00079 19.3 9.7 0.00079 19.3 9.7 2.9 3 0 0 3 3 2 1 zinc-RING finger domain PHD PF00628.29 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.00086 19.2 8.6 0.00086 19.2 8.6 2.8 3 2 0 3 3 3 1 PHD-finger C1_1 PF00130.22 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.0013 18.6 6.6 0.0013 18.6 6.6 3.4 2 1 2 4 4 4 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Prok-RING_1 PF14446.6 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.002 18.0 5.6 0.002 18.0 5.6 3.1 2 1 1 3 3 3 1 Prokaryotic RING finger family 1 Zf_RING PF16744.5 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.025 14.7 4.1 0.025 14.7 4.1 2.8 2 1 1 3 3 2 0 KIAA1045 RING finger RINGv PF12906.7 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.034 14.3 8.0 0.034 14.3 8.0 2.8 3 1 0 3 3 2 0 RING-variant domain zf-RING_11 PF17123.5 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.035 13.8 5.3 0.035 13.8 5.3 2.9 3 0 0 3 3 3 0 RING-like zinc finger zf-RING-like PF08746.11 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 0.054 13.8 9.5 0.054 13.8 9.5 2.8 3 1 0 3 3 2 0 RING-like domain zf-ANAPC11 PF12861.7 NODE_38320_length_552_cov_77.195358_g31001_i0forward_frame_2 - 4.1 7.5 17.9 0.4 10.7 9.0 2.8 1 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger WD40 PF00400.32 ORF99750 - 1.8e-14 53.9 3.5 0.0001 23.0 0.0 4.2 4 0 0 4 4 4 3 WD domain, G-beta repeat eIF2A PF08662.11 ORF99750 - 8.1e-06 25.8 0.1 1e-05 25.5 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A ANAPC4_WD40 PF12894.7 ORF99750 - 0.00012 22.2 0.0 0.07 13.4 0.0 2.5 2 1 0 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF99750 - 0.047 12.7 0.0 0.13 11.2 0.0 1.7 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein MFS_1 PF07690.16 ORF99367 - 2.3e-08 33.4 7.4 1.4e-05 24.2 7.8 2.0 2 0 0 2 2 2 2 Major Facilitator Superfamily DUF3330 PF11809.8 ORF98327 - 3.7 7.7 9.4 0.61 10.2 4.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3330) SSXRD PF09514.10 ORF9748 - 0.079 12.6 0.4 0.2 11.2 0.4 1.7 1 0 0 1 1 1 0 SSXRD motif zf-RING-like PF08746.11 ORF96663 - 2.1 8.7 10.9 0.27 11.6 3.6 2.8 2 2 0 2 2 2 0 RING-like domain FYVE PF01363.21 ORF95826 - 2.3e-11 43.6 18.7 4.4e-11 42.8 18.7 1.4 1 0 0 1 1 1 1 FYVE zinc finger C1_2 PF03107.16 ORF95826 - 0.79 10.1 13.3 12 6.3 8.5 2.4 2 0 0 2 2 2 0 C1 domain Sirohm_synth_M PF14824.6 ORF93744 - 0.11 12.0 1.4 0.19 11.2 0.1 2.1 2 0 0 2 2 2 0 Sirohaem biosynthesis protein central CPSF_A PF03178.15 ORF91402 - 2.4e-20 73.1 0.0 2.7e-20 72.9 0.0 1.0 1 0 0 1 1 1 1 CPSF A subunit region ABC_membrane PF00664.23 ORF90575 - 3.2e-10 40.1 4.1 4.7e-10 39.6 4.1 1.3 1 1 0 1 1 1 1 ABC transporter transmembrane region PhoLip_ATPase_C PF16212.5 ORF90575 - 0.008 16.0 3.0 0.01 15.6 3.0 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Nucleoside_tran PF01733.18 ORF90575 - 0.01 15.2 0.6 0.017 14.5 0.6 1.3 1 0 0 1 1 1 0 Nucleoside transporter DUF3007 PF11460.8 ORF90575 - 0.017 15.4 0.1 0.024 14.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) ECF-ribofla_trS PF07155.12 ORF90575 - 0.044 13.8 2.3 0.06 13.3 2.3 1.2 1 0 0 1 1 1 0 ECF-type riboflavin transporter, S component DUF4282 PF14110.6 ORF90575 - 0.069 13.9 4.0 0.35 11.6 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4282) DUF2304 PF10066.9 ORF90575 - 0.39 11.0 4.8 8 6.7 1.7 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) ESP PF16590.5 ORF89402 - 0.85 9.9 10.7 0.24 11.7 4.3 2.2 2 0 0 2 2 2 0 Exocrine gland-secreting peptide Acetyltransf_10 PF13673.7 ORF894 - 3e-11 43.3 0.0 4.5e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF894 - 3.9e-09 36.8 0.0 5.1e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF894 - 4e-08 33.6 0.0 5.8e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF894 - 0.0002 21.2 0.0 0.00039 20.3 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 ORF894 - 0.012 15.3 0.0 0.018 14.7 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_15 PF17013.5 ORF894 - 0.13 11.7 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative acetyl-transferase HRCT1 PF15758.5 ORF86531 - 0.68 10.9 9.4 1.6 9.7 9.5 1.7 1 1 0 1 1 1 0 Histidine-rich carboxyl terminus protein 1 Pkinase PF00069.25 ORF81247 - 8.1e-07 28.7 0.1 2.1e-06 27.3 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain JLPA PF16668.5 ORF80047 - 0.0025 16.9 0.0 0.0032 16.6 0.0 1.1 1 0 0 1 1 1 1 Adhesin from Campylobacter Mlp PF03304.13 ORF79287 - 0.017 15.4 3.0 0.13 12.4 3.0 2.2 1 1 0 1 1 1 0 Mlp lipoprotein family Methyltransf_PK PF05891.12 ORF7921 - 5.4e-29 101.3 0.0 7.2e-29 100.9 0.0 1.1 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Methyltransf_25 PF13649.6 ORF7921 - 3.4e-14 53.3 0.0 1.1e-13 51.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF7921 - 1.5e-11 44.8 0.0 3.6e-11 43.5 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF7921 - 2.8e-10 40.2 0.0 2.9e-10 40.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF7921 - 8.4e-10 39.3 0.0 1.3e-09 38.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF7921 - 4.9e-05 23.2 0.0 6.9e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 ORF7921 - 7.1e-05 22.2 0.0 8.8e-05 21.9 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain MTS PF05175.14 ORF7921 - 0.00026 20.6 0.0 0.00034 20.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Rsm22 PF09243.10 ORF7921 - 0.0011 18.3 0.0 0.0016 17.7 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 TehB PF03848.14 ORF7921 - 0.0031 16.9 0.0 0.0043 16.5 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB CheR PF01739.18 ORF7921 - 0.0069 15.9 0.0 0.01 15.4 0.0 1.3 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain Ubie_methyltran PF01209.18 ORF7921 - 0.016 14.6 0.0 0.02 14.2 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family MIT_C PF16565.5 ORF77177 - 0.014 15.4 2.1 0.014 15.4 2.1 2.3 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT Jnk-SapK_ap_N PF09744.9 ORF77177 - 0.068 13.4 22.9 0.43 10.8 13.1 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 TSC22 PF01166.18 ORF77177 - 0.27 11.6 15.8 4.7 7.6 0.3 4.2 2 1 1 3 3 3 0 TSC-22/dip/bun family ApoO PF09769.9 ORF77177 - 0.93 9.5 5.7 18 5.3 4.0 3.0 1 1 1 2 2 2 0 Apolipoprotein O FapA PF03961.13 ORF77177 - 2.1 6.8 26.9 0.43 9.1 7.9 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A TPR_MLP1_2 PF07926.12 ORF77177 - 2.2 8.3 20.7 1.5 8.9 10.6 2.7 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein GTP-bdg_M PF16360.5 ORF77177 - 2.4 8.8 8.7 3.3 8.4 0.1 3.3 2 1 1 3 3 3 0 GTP-binding GTPase Middle Region DUF883 PF05957.13 ORF77177 - 2.4 8.8 4.9 1.9 9.1 1.5 2.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) PAPS_reduct PF01507.19 ORF77177 - 5.6 7.0 11.8 3.4 7.7 4.6 2.4 1 1 2 3 3 3 0 Phosphoadenosine phosphosulfate reductase family DUF4140 PF13600.6 ORF77177 - 6.6 7.2 10.8 0.88 10.1 0.8 3.0 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) CorA PF01544.18 ORF77177 - 7.1 5.8 8.5 2.5 7.3 3.5 2.1 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein AFP_2 PF18815.1 ORF75253 - 0.048 13.9 0.9 0.048 13.9 0.9 2.2 2 0 0 2 2 2 0 Bacterial antifreeze protein repeat DUF5415 PF17436.2 ORF74977 - 0.11 12.6 0.9 0.29 11.2 0.1 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5415) Peptidase_S46 PF10459.9 ORF74977 - 0.15 10.7 6.6 0.17 10.5 6.6 1.0 1 0 0 1 1 1 0 Peptidase S46 HTH_37 PF13744.6 ORF74977 - 0.18 11.8 0.1 0.18 11.8 0.1 2.4 2 2 1 3 3 3 0 Helix-turn-helix domain Cob_adeno_trans PF01923.18 ORF74977 - 0.34 11.1 7.1 0.42 10.7 7.1 1.3 1 0 0 1 1 1 0 Cobalamin adenosyltransferase GAS PF13851.6 ORF74977 - 0.7 9.2 6.7 0.6 9.4 2.1 2.3 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF45 PF01863.17 ORF74876 - 1.3e-10 41.7 0.4 1.8e-10 41.2 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.10 ORF74876 - 3e-05 24.2 0.3 4.3e-05 23.7 0.3 1.3 1 0 0 1 1 1 1 WLM domain MIT_C PF16565.5 ORF72967 - 0.014 15.4 2.1 0.014 15.4 2.1 2.3 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT Jnk-SapK_ap_N PF09744.9 ORF72967 - 0.068 13.4 22.9 0.43 10.8 13.1 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 TSC22 PF01166.18 ORF72967 - 0.27 11.6 15.8 4.7 7.6 0.3 4.2 2 1 1 3 3 3 0 TSC-22/dip/bun family ApoO PF09769.9 ORF72967 - 0.93 9.5 5.7 18 5.3 4.0 3.0 1 1 1 2 2 2 0 Apolipoprotein O FapA PF03961.13 ORF72967 - 2.1 6.8 26.9 0.43 9.1 7.9 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A TPR_MLP1_2 PF07926.12 ORF72967 - 2.2 8.3 20.7 1.5 8.9 10.6 2.7 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein GTP-bdg_M PF16360.5 ORF72967 - 2.4 8.8 8.7 3.3 8.4 0.1 3.3 2 1 1 3 3 3 0 GTP-binding GTPase Middle Region DUF883 PF05957.13 ORF72967 - 2.4 8.8 4.9 1.9 9.1 1.5 2.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) PAPS_reduct PF01507.19 ORF72967 - 5.6 7.0 11.8 3.4 7.7 4.6 2.4 1 1 2 3 3 3 0 Phosphoadenosine phosphosulfate reductase family DUF4140 PF13600.6 ORF72967 - 6.6 7.2 10.8 0.88 10.1 0.8 3.0 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) CorA PF01544.18 ORF72967 - 7.1 5.8 8.5 2.5 7.3 3.5 2.1 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein CitX PF03802.14 ORF72934 - 3.6e-53 179.7 0.0 4e-53 179.5 0.0 1.0 1 0 0 1 1 1 1 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase KH_1 PF00013.29 ORF71062 - 0.012 15.5 0.0 0.03 14.2 0.0 1.6 1 0 0 1 1 1 0 KH domain RNA_pol_3_Rpc31 PF11705.8 ORF70867 - 0.37 11.0 8.2 0.41 10.9 8.2 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 F-box-like PF12937.7 ORF70559 - 4.6e-05 23.2 0.1 8.4e-05 22.4 0.1 1.4 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 ORF70559 - 0.021 14.7 0.0 0.04 13.8 0.0 1.5 1 0 0 1 1 1 0 F-box domain bZIP_1 PF00170.21 ORF6927 - 0.0001 22.3 7.2 0.0001 22.3 7.2 1.7 1 1 0 1 1 1 1 bZIP transcription factor KLRAQ PF10205.9 ORF6927 - 0.0014 18.8 11.4 0.003 17.7 1.7 2.3 1 1 1 2 2 2 2 Predicted coiled-coil domain-containing protein bZIP_2 PF07716.15 ORF6927 - 0.25 11.4 8.8 0.1 12.7 5.8 1.9 1 1 0 1 1 1 0 Basic region leucine zipper CHMI PF02962.15 ORF68520 - 0.042 14.2 0.1 0.29 11.5 0.0 2.0 2 0 0 2 2 2 0 5-carboxymethyl-2-hydroxymuconate isomerase TPR_15 PF13429.6 ORF68520 - 0.058 12.6 0.6 0.085 12.1 0.6 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat LMBR1 PF04791.16 ORF68520 - 2.5 6.9 6.8 4.3 6.1 6.8 1.5 1 1 0 1 1 1 0 LMBR1-like membrane protein F-box PF00646.33 ORF68282 - 0.00082 19.2 0.1 0.0018 18.1 0.1 1.6 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 ORF68282 - 0.01 15.7 0.3 0.019 14.9 0.3 1.4 1 0 0 1 1 1 0 F-box-like DUF3557 PF12078.8 ORF67978 - 0.084 12.8 0.7 3.7 7.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3557) PyrI_C PF02748.15 ORF65634 - 0.058 13.3 1.4 0.26 11.2 0.1 2.2 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain CDKN3 PF05706.12 ORF64673 - 0.057 13.1 0.0 0.076 12.7 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) EF-hand_1 PF00036.32 ORF64161 - 1.9e-06 27.0 8.1 0.003 17.0 1.7 4.0 3 1 1 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF64161 - 5.9e-06 26.6 3.9 0.00025 21.4 1.1 3.2 2 2 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF64161 - 0.00041 20.0 8.1 0.037 14.0 1.3 3.8 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF64161 - 0.039 13.5 0.7 0.32 10.6 0.1 2.4 2 0 0 2 2 2 0 EF hand EF-hand_8 PF13833.6 ORF64161 - 0.11 12.3 3.6 1.9 8.4 1.4 3.3 3 0 0 3 3 3 0 EF-hand domain pair MFS_1 PF07690.16 ORF63635 - 2.3e-08 33.4 7.4 1.4e-05 24.2 7.8 2.0 2 0 0 2 2 2 2 Major Facilitator Superfamily Mlp PF03304.13 ORF63338 - 0.017 15.4 3.0 0.13 12.4 3.0 2.2 1 1 0 1 1 1 0 Mlp lipoprotein family Acetyltransf_10 PF13673.7 ORF6196 - 3e-11 43.3 0.0 4.5e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF6196 - 3.9e-09 36.8 0.0 5.1e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF6196 - 4e-08 33.6 0.0 5.8e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF6196 - 0.0002 21.2 0.0 0.00039 20.3 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 ORF6196 - 0.012 15.3 0.0 0.018 14.7 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_15 PF17013.5 ORF6196 - 0.13 11.7 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative acetyl-transferase DUF848 PF05852.11 ORF6191 - 0.00025 21.2 2.3 0.061 13.4 0.9 2.3 1 1 1 2 2 2 2 Gammaherpesvirus protein of unknown function (DUF848) Nudix_N PF12535.8 ORF6191 - 0.095 12.3 0.4 0.31 10.7 0.1 1.9 2 0 0 2 2 2 0 Hydrolase of X-linked nucleoside diphosphate N terminal JLPA PF16668.5 ORF602 - 0.0025 16.9 0.0 0.0032 16.6 0.0 1.1 1 0 0 1 1 1 1 Adhesin from Campylobacter DASH_Spc19 PF08287.11 ORF6 - 0.047 13.6 0.2 0.066 13.1 0.2 1.2 1 0 0 1 1 1 0 Spc19 FlaC_arch PF05377.11 ORF6 - 0.18 12.2 0.2 0.36 11.2 0.2 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) RimM PF01782.18 ORF58845 - 4.1e-27 94.2 0.0 6.2e-27 93.6 0.0 1.3 1 0 0 1 1 1 1 RimM N-terminal domain PRC PF05239.16 ORF58845 - 1.2e-09 38.1 0.7 1.9e-09 37.5 0.7 1.3 1 0 0 1 1 1 1 PRC-barrel domain Mac PF12464.8 ORF57788 - 2.5e-16 59.7 0.2 3.5e-16 59.2 0.2 1.2 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep_2 PF14602.6 ORF57788 - 1.9e-15 56.3 12.5 4.3e-11 42.4 5.0 3.1 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 ORF57788 - 2.1e-13 49.4 15.2 7.6e-11 41.3 7.3 3.2 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) nec1 PF10379.9 ORF57788 - 0.024 14.2 0.0 0.044 13.3 0.0 1.4 1 0 0 1 1 1 0 Virulence protein nec1 Apolipoprotein PF01442.18 ORF56900 - 0.0085 16.0 2.1 0.013 15.3 2.1 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain TPR_MLP1_2 PF07926.12 ORF56900 - 0.015 15.4 0.5 0.024 14.7 0.5 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein TolA_bind_tri PF16331.5 ORF56900 - 0.021 14.9 1.3 0.044 13.9 1.3 1.5 1 0 0 1 1 1 0 TolA binding protein trimerisation IKBKB_SDD PF18397.1 ORF56900 - 0.032 13.5 0.1 0.047 13.0 0.1 1.2 1 0 0 1 1 1 0 IQBAL scaffold dimerization domain COMP PF11598.8 ORF56900 - 0.034 14.6 2.6 3 8.4 0.0 2.2 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein HIP1_clath_bdg PF16515.5 ORF56900 - 0.11 13.2 2.7 0.21 12.2 2.6 1.6 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 PhaP_Bmeg PF09602.10 ORF56900 - 0.13 12.2 0.5 0.19 11.6 0.5 1.2 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) Voldacs PF03517.13 ORF53449 - 4e-23 82.1 0.2 4e-23 82.1 0.2 2.1 1 1 1 2 2 2 1 Regulator of volume decrease after cellular swelling zf-C3HC4_4 PF15227.6 ORF53315 - 2.7e-07 30.6 10.6 5.8e-07 29.6 8.2 2.3 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF53315 - 4e-07 29.9 6.9 4e-07 29.9 6.9 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF53315 - 2.8e-06 27.1 6.6 2.8e-06 27.1 6.6 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF53315 - 4.5e-05 23.2 6.9 0.00013 21.7 6.9 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF53315 - 4.8e-05 23.6 8.4 4.8e-05 23.6 8.4 2.0 2 1 0 2 2 2 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF53315 - 0.00094 19.0 11.6 0.0012 18.6 9.2 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF53315 - 0.013 15.5 9.2 0.013 15.5 9.2 2.1 2 0 0 2 2 2 0 zinc-RING finger domain Ribosomal_L22e PF01776.17 ORF53315 - 0.014 15.8 0.6 0.023 15.1 0.6 1.3 1 0 0 1 1 1 0 Ribosomal L22e protein family DUF2931 PF11153.8 ORF53315 - 0.031 14.0 0.5 0.038 13.7 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) Prok-RING_4 PF14447.6 ORF53315 - 2.3 8.2 11.8 67 3.5 12.2 2.6 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 DIX PF00778.17 ORF52525 - 1e-11 44.5 0.0 1.4e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 DIX domain UPF0172 PF03665.13 ORF51570 - 5.1e-26 91.9 0.8 5.8e-26 91.7 0.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0172) SnAPC_2_like PF11035.8 ORF50947 - 0.093 12.9 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 Small nuclear RNA activating complex subunit 2, SNAP190 Myb UCH PF00443.29 ORF49811 - 0.43 10.0 3.6 0.33 10.4 1.9 1.6 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase CBS PF00571.28 ORF48888 - 0.0023 18.3 0.2 0.0068 16.8 0.0 1.8 2 0 0 2 2 2 1 CBS domain DUF261 PF03196.13 ORF46939 - 0.06 13.5 0.1 0.082 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF261 CobD_Cbib PF03186.13 ORF46939 - 0.065 12.4 0.1 0.087 12.0 0.1 1.1 1 0 0 1 1 1 0 CobD/Cbib protein DASH_Ask1 PF08655.10 ORF46939 - 0.2 11.6 2.3 0.64 9.9 0.2 2.4 2 1 0 2 2 2 0 DASH complex subunit Ask1 ALG3 PF05208.13 ORF46406 - 2.9e-30 105.9 9.3 3.5e-30 105.7 9.3 1.0 1 0 0 1 1 1 1 ALG3 protein DUF3363 PF11843.8 ORF46106 - 0.035 13.1 0.1 0.04 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3363) zf-RING_2 PF13639.6 ORF43908 - 5.2e-12 45.9 6.8 7.6e-12 45.4 6.8 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF43908 - 1.3e-08 35.0 7.7 4.2e-08 33.3 7.7 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF43908 - 5.4e-07 29.5 5.4 7.7e-07 29.0 5.4 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF43908 - 6.6e-06 25.9 6.6 1.2e-05 25.1 6.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF43908 - 8.5e-06 25.5 7.7 2.6e-05 24.0 7.7 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF43908 - 2.4e-05 24.1 4.8 3.7e-05 23.5 4.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF43908 - 4e-05 23.6 0.5 6.4e-05 22.9 0.5 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 ORF43908 - 6.5e-05 22.6 3.0 0.00011 21.8 3.0 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF43908 - 0.00014 21.8 2.2 0.00025 21.0 2.2 1.4 1 0 0 1 1 1 1 RING-type zinc-finger DUF1272 PF06906.11 ORF43908 - 0.0013 18.8 2.0 0.0024 17.9 2.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) FANCL_C PF11793.8 ORF43908 - 0.0019 18.4 6.3 0.0081 16.3 6.3 1.9 1 1 0 1 1 1 1 FANCL C-terminal domain Gmx_para_CXXCG PF09535.10 ORF43908 - 0.0031 16.8 0.2 0.004 16.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (Gmx_para_CXXCG) Zn_ribbon_17 PF17120.5 ORF43908 - 0.01 15.4 5.3 0.021 14.4 5.3 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF43908 - 0.017 15.3 7.5 0.034 14.3 7.5 1.5 1 0 0 1 1 1 0 RING-variant domain Prok-RING_4 PF14447.6 ORF43908 - 0.042 13.7 6.0 1.1 9.2 6.8 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF43908 - 0.052 13.4 4.0 0.091 12.6 4.0 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Baculo_RING PF05883.11 ORF43908 - 0.067 13.2 0.6 0.13 12.3 0.6 1.5 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zinc-ribbons_6 PF07191.12 ORF43908 - 0.28 11.2 3.2 0.49 10.4 3.2 1.4 1 0 0 1 1 1 0 zinc-ribbons zf-Nse PF11789.8 ORF43908 - 0.33 10.8 4.0 0.61 9.9 4.0 1.5 1 1 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 ORF43908 - 0.34 11.1 6.4 14 6.0 6.3 2.6 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING-like PF08746.11 ORF43908 - 2.9 8.3 7.4 8.4 6.8 7.5 1.7 1 1 0 1 1 1 0 RING-like domain zf-C3H2C3 PF17122.5 ORF43908 - 6.1 7.0 6.4 26 5.0 6.4 2.1 1 1 0 1 1 1 0 Zinc-finger HMMR_C PF15908.5 ORF42966 - 1.8e-06 28.3 8.8 1.8e-06 28.3 8.8 2.8 2 2 0 2 2 2 1 Hyaluronan mediated motility receptor C-terminal Prefoldin_3 PF13758.6 ORF42966 - 0.058 13.5 10.0 0.28 11.3 10.0 2.1 1 1 0 1 1 1 0 Prefoldin subunit DUF5327 PF17261.2 ORF42966 - 0.5 11.1 7.4 0.13 13.0 3.1 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5327) SOGA PF11365.8 ORF42966 - 0.6 11.3 16.2 0.79 10.9 5.4 2.2 2 0 0 2 2 2 0 Protein SOGA Phage_GPO PF05929.11 ORF42966 - 3 7.4 10.1 1.3 8.6 6.6 1.8 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase APG6_N PF17675.1 ORF42966 - 4.7 7.7 20.3 5.7 7.5 11.3 2.3 1 1 1 2 2 2 0 Apg6 coiled-coil region Secretin_N_2 PF07655.13 ORF4033 - 1.5 9.4 13.6 0.28 11.8 5.0 2.2 2 0 0 2 2 2 0 Secretin N-terminal domain COQ7 PF03232.13 ORF4033 - 3.2 7.5 10.3 0.78 9.5 5.2 2.2 1 1 1 2 2 2 0 Ubiquinone biosynthesis protein COQ7 DUF4758 PF15950.5 ORF4033 - 4.3 7.7 7.9 1.8 8.9 5.1 1.7 1 1 1 2 2 2 0 Putative sperm flagellar membrane protein DUF4407 PF14362.6 ORF4033 - 8.8 5.6 16.7 10 5.4 16.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SH2_2 PF14633.6 ORF34977 - 0.24 10.8 0.0 0.33 10.3 0.0 1.2 1 0 0 1 1 1 0 SH2 domain DHQ_synthase PF01761.20 ORF34554 - 2.5e-37 128.5 0.1 3e-37 128.2 0.1 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Spectrin PF00435.21 ORF34359 - 0.1 13.1 4.2 0.16 12.4 0.5 2.5 2 1 0 3 3 3 0 Spectrin repeat DASH_Spc19 PF08287.11 ORF34359 - 0.98 9.3 11.2 4.8 7.0 4.2 2.2 2 0 0 2 2 2 0 Spc19 Peptidase_S49_N PF08496.10 ORF34359 - 9.7 6.2 9.0 3.3 7.8 5.9 1.8 2 0 0 2 2 2 0 Peptidase family S49 N-terminal DUF3920 PF13058.6 ORF33054 - 0.079 13.2 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3920) Macin PF14865.6 ORF33054 - 0.51 10.9 8.3 0.64 10.6 0.9 3.1 3 0 0 3 3 3 0 Macin EF-hand_1 PF00036.32 ORF31459 - 1.7e-11 42.8 7.1 2.2e-07 29.9 0.7 3.4 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF31459 - 1.6e-10 41.3 1.4 1.6e-10 41.3 1.4 2.3 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF31459 - 6.5e-09 34.9 3.5 0.0018 17.7 0.0 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF31459 - 2.9e-08 33.0 2.5 0.0031 17.3 0.5 3.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF31459 - 8.3e-07 28.8 4.7 0.00038 20.2 0.9 2.7 2 0 0 2 2 2 2 EF-hand domain pair YceG_bac PF14266.6 ORF31459 - 0.014 14.4 2.0 0.018 14.0 2.0 1.1 1 0 0 1 1 1 0 Putative component of 'biosynthetic module' EF-hand_9 PF14658.6 ORF31459 - 0.019 15.3 0.2 0.049 14.0 0.0 1.8 2 1 0 2 2 2 0 EF-hand domain EF-hand_4 PF12763.7 ORF31459 - 0.66 10.0 7.1 0.063 13.2 1.0 2.4 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand DUF615 PF04751.14 ORF29254 - 3.6e-55 186.2 9.0 4.1e-55 186.0 9.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF615) EntA_Immun PF08951.10 ORF29254 - 0.00087 19.6 1.4 0.017 15.5 0.1 2.6 1 1 0 2 2 2 1 Enterocin A Immunity DUF982 PF06169.12 ORF29254 - 0.036 14.1 0.0 0.14 12.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF982) YAcAr PF10686.9 ORF29254 - 0.13 12.2 0.0 0.29 11.1 0.0 1.6 1 0 0 1 1 1 0 YspA, cpYpsA-related SLOG family Acetyltransf_1 PF00583.25 ORF25701 - 4.7e-13 49.4 0.0 6.3e-13 49.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF25701 - 2.9e-10 40.1 0.0 3.8e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF25701 - 4e-09 36.8 0.0 6.7e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF25701 - 5.6e-08 32.6 0.0 8.8e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF25701 - 0.002 18.3 0.0 0.0034 17.5 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF25701 - 0.013 15.5 0.0 0.023 14.8 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF23453 - 4.7e-13 49.4 0.0 6.3e-13 49.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF23453 - 2.9e-10 40.1 0.0 3.8e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF23453 - 4e-09 36.8 0.0 6.7e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF23453 - 5.6e-08 32.6 0.0 8.8e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF23453 - 0.002 18.3 0.0 0.0034 17.5 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF23453 - 0.013 15.5 0.0 0.023 14.8 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain GST_C PF00043.25 ORF22133 - 1.6e-07 31.4 0.0 3.1e-07 30.5 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF22133 - 2.1e-05 24.6 0.1 4.7e-05 23.5 0.1 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF22133 - 0.0017 18.4 0.0 0.0053 16.8 0.0 2.0 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain AIG1 PF04548.16 ORF22133 - 0.0084 15.5 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 1 AIG1 family TMP-TENI PF02581.17 ORF22133 - 0.043 13.1 0.0 0.062 12.6 0.0 1.2 1 0 0 1 1 1 0 Thiamine monophosphate synthase DUF3330 PF11809.8 ORF20796 - 3.7 7.7 9.4 0.61 10.2 4.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3330) AKAP_110 PF05716.13 ORF19950 - 0.061 11.6 0.0 0.075 11.3 0.0 1.1 1 0 0 1 1 1 0 A-kinase anchor protein 110 kDa (AKAP 110) UPAR_LY6_2 PF16975.5 ORF18972 - 0.018 15.2 0.9 0.024 14.8 0.0 1.7 2 0 0 2 2 2 0 Ly6/PLAUR domain-containing protein 6, Lypd6 Acetyltransf_CG PF14542.6 ORF18972 - 0.15 12.2 0.1 0.46 10.6 0.0 1.8 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase DUF1824 PF08854.10 ORF152733 - 1.3e-13 51.0 0.1 5.8e-08 32.7 0.0 2.3 2 1 0 2 2 2 2 Domain of unknown function (DUF1824) MIT_C PF16565.5 ORF151998 - 0.014 15.4 2.1 0.014 15.4 2.1 2.3 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT Jnk-SapK_ap_N PF09744.9 ORF151998 - 0.068 13.4 22.9 0.43 10.8 13.1 2.2 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 TSC22 PF01166.18 ORF151998 - 0.27 11.6 15.8 4.7 7.6 0.3 4.2 2 1 1 3 3 3 0 TSC-22/dip/bun family ApoO PF09769.9 ORF151998 - 0.93 9.5 5.7 18 5.3 4.0 3.0 1 1 1 2 2 2 0 Apolipoprotein O FapA PF03961.13 ORF151998 - 2.1 6.8 26.9 0.43 9.1 7.9 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A TPR_MLP1_2 PF07926.12 ORF151998 - 2.2 8.3 20.7 1.5 8.9 10.6 2.7 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein GTP-bdg_M PF16360.5 ORF151998 - 2.4 8.8 8.7 3.3 8.4 0.1 3.3 2 1 1 3 3 3 0 GTP-binding GTPase Middle Region DUF883 PF05957.13 ORF151998 - 2.4 8.8 4.9 1.9 9.1 1.5 2.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) PAPS_reduct PF01507.19 ORF151998 - 5.6 7.0 11.8 3.4 7.7 4.6 2.4 1 1 2 3 3 3 0 Phosphoadenosine phosphosulfate reductase family DUF4140 PF13600.6 ORF151998 - 6.6 7.2 10.8 0.88 10.1 0.8 3.0 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) CorA PF01544.18 ORF151998 - 7.1 5.8 8.5 2.5 7.3 3.5 2.1 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein PBP PF01161.20 ORF147785 - 2e-36 125.2 0.0 2.5e-36 124.9 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Defensin_propep PF00879.18 ORF147785 - 0.031 14.6 0.0 0.048 13.9 0.0 1.3 1 0 0 1 1 1 0 Defensin propeptide DUF676 PF05057.14 ORF146806 - 1e-21 77.5 0.1 1.4e-21 77.0 0.1 1.2 1 0 0 1 1 1 1 Putative serine esterase (DUF676) SIP1 PF04938.12 ORF145826 - 0.021 14.5 1.9 0.042 13.6 0.5 2.0 1 1 1 3 3 3 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) Gluconate_2-dh3 PF13618.6 ORF145826 - 0.091 13.0 0.1 0.13 12.5 0.1 1.5 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 DUF1018 PF06252.12 ORF145826 - 0.13 13.3 1.0 0.33 11.9 1.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1018) Ank_2 PF12796.7 ORF145313 - 1.6e-09 38.2 0.0 2.4e-08 34.4 0.0 2.2 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF145313 - 1.1e-08 35.5 0.1 0.0034 17.9 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF145313 - 5.6e-06 26.6 0.0 1.2 9.7 0.1 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF145313 - 0.0017 18.7 0.0 13 6.8 0.0 3.5 3 1 0 3 3 3 2 Ankyrin repeat DUF3489 PF11994.8 ORF144317 - 0.011 15.8 0.0 0.023 14.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) Raco_middle PF17651.1 ORF144153 - 0.15 11.7 0.3 0.2 11.4 0.3 1.2 1 0 0 1 1 1 0 RACo middle region DUF4131 PF13567.6 ORF140569 - 9.4 5.9 6.8 18 5.0 6.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3557 PF12078.8 ORF139908 - 0.084 12.8 0.7 3.7 7.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3557) Pterin_4a PF01329.19 ORF139729 - 2.2e-13 50.2 0.6 3.3e-13 49.6 0.6 1.3 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase GSHPx PF00255.19 ORF139197 - 4.5e-47 158.1 0.0 5.6e-47 157.8 0.0 1.1 1 0 0 1 1 1 1 Glutathione peroxidase Redoxin PF08534.10 ORF139197 - 0.0051 16.5 0.0 0.14 11.8 0.0 2.1 2 0 0 2 2 2 1 Redoxin CDC48_2 PF02933.17 ORF134408 - 5.4e-05 22.9 0.0 0.059 13.2 0.0 2.5 2 1 0 2 2 2 2 Cell division protein 48 (CDC48), domain 2 WD40 PF00400.32 ORF131700 - 7.9e-07 29.7 4.1 0.17 12.8 0.1 3.8 4 0 0 4 4 4 3 WD domain, G-beta repeat GST_C PF00043.25 ORF130781 - 3.8e-07 30.2 1.4 1.2e-06 28.6 0.0 2.2 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF130781 - 4.5e-06 26.8 0.4 8.6e-06 25.9 0.0 1.7 1 1 1 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF130781 - 0.0019 18.2 0.0 0.0031 17.5 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain DUF1097 PF06496.11 ORF128838 - 3.9e-38 130.8 26.1 4.9e-38 130.5 26.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1097) LamB PF02264.15 ORF127546 - 1.9e-51 176.1 10.6 2.1e-51 176.0 10.6 1.0 1 0 0 1 1 1 1 LamB porin Acyl_CoA_thio PF02551.15 ORF126760 - 6.5e-52 174.9 0.0 8.2e-52 174.5 0.0 1.1 1 0 0 1 1 1 1 Acyl-CoA thioesterase 4HBT_3 PF13622.6 ORF126760 - 2.5e-29 103.3 0.1 2.8e-29 103.1 0.1 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.22 ORF126760 - 0.0023 18.2 0.0 0.0038 17.6 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily Glycos_transf_1 PF00534.20 ORF124907 - 1.5e-07 31.1 0.0 2.9e-07 30.2 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF124907 - 3.5e-07 30.7 0.0 4.7e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Cyt-b5 PF00173.28 ORF124784 - 0.052 13.7 0.0 0.4 10.9 0.0 2.1 2 0 0 2 2 2 0 Cytochrome b5-like Heme/Steroid binding domain ShK PF01549.24 ORF124784 - 0.44 11.1 31.0 0.077 13.5 3.5 4.8 3 2 0 3 3 3 0 ShK domain-like tRNA-synt_2 PF00152.20 ORF12004 - 2.5e-28 99.1 0.0 2.9e-28 98.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF12004 - 0.2 11.1 0.0 0.3 10.5 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) DeoRC PF00455.22 ORF119284 - 7.6e-38 130.0 0.0 8.8e-38 129.8 0.0 1.0 1 0 0 1 1 1 1 DeoR C terminal sensor domain TAT_signal PF10518.9 ORF119258 - 0.022 14.6 0.9 0.022 14.6 0.9 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 ORF119258 - 0.1 12.0 0.2 0.21 11.0 0.2 1.5 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Cyt-b5 PF00173.28 ORF115473 - 0.052 13.7 0.0 0.4 10.9 0.0 2.1 2 0 0 2 2 2 0 Cytochrome b5-like Heme/Steroid binding domain ShK PF01549.24 ORF115473 - 0.44 11.1 31.0 0.077 13.5 3.5 4.8 3 2 0 3 3 3 0 ShK domain-like HycH PF07450.11 ORF115306 - 5.5e-50 169.1 0.0 6.4e-50 168.8 0.0 1.1 1 0 0 1 1 1 1 Formate hydrogenlyase maturation protein HycH Carb_anhydrase PF00194.21 ORF115306 - 0.14 11.7 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic-type carbonic anhydrase Knl1_RWD_C PF18210.1 ORF114177 - 0.0024 18.3 0.2 0.0041 17.6 0.2 1.4 1 0 0 1 1 1 1 Knl1 RWD C-terminal domain SH2_2 PF14633.6 ORF113929 - 0.24 10.8 0.0 0.33 10.3 0.0 1.2 1 0 0 1 1 1 0 SH2 domain DUF3557 PF12078.8 ORF112875 - 0.084 12.8 0.7 3.7 7.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3557) DUF3330 PF11809.8 ORF110065 - 3.7 7.7 9.4 0.61 10.2 4.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3330) PAP1 PF08601.10 ORF109736 - 2.4 7.8 10.9 3.2 7.4 10.9 1.2 1 0 0 1 1 1 0 Transcription factor PAP1 SSXRD PF09514.10 ORF107893 - 0.079 12.6 0.4 0.2 11.2 0.4 1.7 1 0 0 1 1 1 0 SSXRD motif Imp-YgjV PF10688.9 ORF10738 - 2e-57 193.4 13.6 2.3e-57 193.3 13.6 1.0 1 0 0 1 1 1 1 Bacterial inner membrane protein YfhO PF09586.10 ORF10738 - 6.9 4.8 7.0 7.3 4.7 7.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF4913 PF16259.5 ORF106123 - 0.14 12.3 0.9 7 6.8 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4913) Med3 PF11593.8 ORF104005 - 0.0029 16.8 1.5 0.0037 16.5 1.5 1.1 1 0 0 1 1 1 1 Mediator complex subunit 3 fungal Apolipoprotein PF01442.18 ORF104005 - 0.0044 16.9 0.9 0.01 15.7 0.3 1.9 2 1 0 2 2 2 1 Apolipoprotein A1/A4/E domain MCPsignal PF00015.21 ORF104005 - 0.0063 16.3 1.2 0.035 13.9 0.0 2.0 1 1 1 2 2 2 1 Methyl-accepting chemotaxis protein (MCP) signalling domain YlbD_coat PF14071.6 ORF104005 - 0.0082 16.4 3.0 0.85 9.9 0.7 2.2 1 1 1 2 2 2 2 Putative coat protein 7tm_6 PF02949.20 ORF104005 - 0.011 14.8 0.0 0.016 14.3 0.0 1.2 1 0 0 1 1 1 0 7tm Odorant receptor Ead_Ea22 PF13935.6 ORF104005 - 0.012 16.3 1.0 0.019 15.7 1.0 1.4 1 1 0 1 1 1 0 Ead/Ea22-like protein Lipoprotein_2 PF00921.17 ORF104005 - 0.013 15.1 4.3 0.013 15.1 4.3 1.9 1 1 0 1 1 1 0 Borrelia lipoprotein AAA_23 PF13476.6 ORF104005 - 0.021 15.3 5.0 0.026 15.1 5.0 1.1 1 0 0 1 1 1 0 AAA domain DUF1804 PF08822.11 ORF104005 - 0.044 13.8 3.8 0.39 10.7 0.4 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1804) DUF2935 PF11155.8 ORF104005 - 0.049 14.0 1.5 0.97 9.8 0.4 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF2935) AI-2E_transport PF01594.16 ORF104005 - 0.12 11.5 0.0 0.33 10.1 0.0 1.7 1 1 0 2 2 2 0 AI-2E family transporter Cauli_AT PF03233.13 ORF104005 - 0.18 11.7 4.0 0.25 11.3 3.0 1.8 1 1 1 2 2 2 0 Aphid transmission protein GARP PF16731.5 ORF104005 - 0.26 11.0 12.0 0.067 12.9 5.4 2.3 2 1 0 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma DUF4164 PF13747.6 ORF104005 - 0.37 11.1 4.8 1.1 9.5 0.3 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) YjfB_motility PF14070.6 ORF104005 - 0.55 10.4 4.6 15 5.8 1.5 2.5 2 0 0 2 2 2 0 Putative motility protein YtxH PF12732.7 ORF104005 - 0.85 10.2 10.5 3.1 8.4 5.8 2.8 2 2 0 2 2 2 0 YtxH-like protein NPV_P10 PF05531.12 ORF104005 - 1.1 9.8 4.8 34 5.0 0.1 3.0 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein CREPT PF16566.5 ORF104005 - 2.9 8.1 7.4 2.1 8.5 1.7 2.3 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour zf-CDGSH PF09360.10 ORF101810 - 2.2 8.6 5.4 16 5.8 0.0 2.9 2 1 0 2 2 2 0 Iron-binding zinc finger CDGSH type DUF3330 PF11809.8 ORF101229 - 3.7 7.7 9.4 0.61 10.2 4.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3330) DUF2254 PF10011.9 NODE_38734_length_544_cov_3.017682_g31382_i0forward_frame_1 - 2.7 6.7 5.0 4 6.1 5.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DPM3 PF08285.11 NODE_38734_length_544_cov_3.017682_g31382_i0forward_frame_1 - 3.3 8.0 6.8 0.88 9.8 2.9 2.0 2 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) GBP_C PF02841.14 NODE_38731_length_544_cov_4.227898_g31379_i0forward_frame_1 - 0.089 12.2 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain Gp58 PF07902.11 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.0053 15.1 1.3 0.0067 14.8 1.3 1.2 1 0 0 1 1 1 1 gp58-like protein DASH_Hsk3 PF08227.11 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.013 15.8 0.2 0.26 11.7 0.1 2.4 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like DUF2407_C PF13373.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.019 15.2 0.4 0.031 14.5 0.4 1.2 1 0 0 1 1 1 0 DUF2407 C-terminal domain Apolipoprotein PF01442.18 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.022 14.6 8.6 0.043 13.7 8.6 1.5 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain NPV_P10 PF05531.12 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.035 14.6 2.6 0.32 11.5 2.6 2.2 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Exonuc_VII_L PF02601.15 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.051 13.1 10.9 0.064 12.8 10.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit PKcGMP_CC PF16808.5 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.093 12.6 9.3 2.9 7.8 0.1 3.8 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase V_ATPase_I PF01496.19 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.098 10.6 6.6 0.12 10.3 6.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3584 PF12128.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.2 9.1 15.4 0.24 8.9 15.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) CENP-Q PF13094.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.4 10.9 14.5 0.2 11.8 12.2 1.5 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Phage_Mu_Gam PF07352.12 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.4 10.6 11.6 0.066 13.1 7.4 1.7 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein FlaC_arch PF05377.11 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.42 11.0 9.1 2.4 8.6 1.8 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DASH_Dam1 PF08653.10 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.55 10.1 2.3 1.8 8.4 0.6 2.4 1 1 2 3 3 2 0 DASH complex subunit Dam1 TMF_DNA_bd PF12329.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.56 10.2 21.6 0.036 14.1 13.1 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Atg14 PF10186.9 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.57 9.2 12.2 0.78 8.8 12.2 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FliS PF02561.14 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.63 10.3 5.6 2.1 8.7 3.2 2.3 1 1 1 2 2 2 0 Flagellar protein FliS LMBR1 PF04791.16 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.64 8.8 8.1 0.8 8.5 8.1 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF489 PF04356.12 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.72 9.8 5.4 2.7 8.0 5.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF489) DUF1664 PF07889.12 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.77 9.8 7.0 0.29 11.2 1.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FlxA PF14282.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 0.77 9.8 14.7 0.72 9.9 7.2 2.4 1 1 2 3 3 3 0 FlxA-like protein End3 PF12761.7 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 1.2 9.2 14.8 0.68 10.1 4.3 2.0 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 Fib_alpha PF08702.10 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 2.1 8.5 14.0 4.4 7.5 1.7 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF3552 PF12072.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 2.6 7.4 19.4 1.9 7.8 18.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF3450 PF11932.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 3.1 7.0 11.7 5.7 6.2 11.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4407 PF14362.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 3.2 7.0 13.1 6.2 6.1 13.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 5.3 6.2 15.1 1.9 7.7 5.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein AATF-Che1 PF13339.6 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 6.8 7.4 13.4 11 6.6 12.1 1.8 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor Tho2 PF11262.8 NODE_38710_length_544_cov_121.752456_g31359_i0reverse_frame_1 - 9.6 5.3 18.9 4.2 6.5 8.2 2.0 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 YEATS PF03366.16 NODE_38706_length_544_cov_131.703340_g31355_i0forward_frame_1 - 4.2e-17 61.9 2.9 4.2e-17 61.9 2.9 1.7 2 0 0 2 2 2 1 YEATS family Imm51 PF15595.6 NODE_38706_length_544_cov_131.703340_g31355_i0forward_frame_1 - 0.041 13.8 0.2 0.1 12.5 0.1 1.7 1 1 0 1 1 1 0 Immunity protein 51 Ax_dynein_light PF10211.9 NODE_38704_length_544_cov_131.744597_g31353_i0reverse_frame_1 - 2.7 7.9 10.7 1.3 8.9 6.4 2.0 1 1 1 2 2 2 0 Axonemal dynein light chain Protamine_3 PF08188.11 NODE_38686_length_544_cov_1344.919450_g31336_i0forward_frame_1 - 2.2 8.5 0.0 2.2 8.5 0.0 3.2 4 0 0 4 4 4 0 Spermatozal protamine family Mem_trans PF03547.18 NODE_38682_length_545_cov_1.688235_g31334_i0reverse_frame_1 - 1.2e-32 112.8 5.6 1.2e-30 106.3 0.7 2.0 1 1 1 2 2 2 2 Membrane transport protein ABC2_membrane_5 PF13346.6 NODE_38682_length_545_cov_1.688235_g31334_i0reverse_frame_1 - 1 8.8 7.9 2.7 7.5 0.2 2.5 3 0 0 3 3 3 0 ABC-2 family transporter protein Transket_pyr PF02779.24 NODE_38679_length_545_cov_2.354902_g31331_i0reverse_frame_1 - 3e-26 92.2 0.0 4.1e-26 91.7 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Secretin_N_2 PF07655.13 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_1 - 0.71 10.4 14.2 24 5.6 11.7 2.3 2 0 0 2 2 2 0 Secretin N-terminal domain SR-25 PF10500.9 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_1 - 4.1 6.9 21.9 6.1 6.4 21.9 1.3 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HSA PF07529.13 NODE_38671_length_545_cov_40.123529_g31323_i0reverse_frame_1 - 0.0057 16.9 3.4 1.4 9.3 1.0 2.9 3 0 0 3 3 3 2 HSA HECT PF00632.25 NODE_38649_length_545_cov_153.174510_g31302_i0forward_frame_1 - 6.6e-35 121.1 0.1 7.8e-35 120.8 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Sec63 PF02889.16 NODE_38644_length_545_cov_199.676471_g31297_i0reverse_frame_1 - 9.5e-08 31.5 0.0 1.4e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Sec63 Brl domain PCSK9_C1 PF18459.1 NODE_38636_length_545_cov_2073.013725_g31290_i0reverse_frame_1 - 0.16 12.1 0.3 0.16 12.1 0.3 2.0 2 0 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Mem_trans PF03547.18 NODE_38635_length_545_cov_8444.762745_g31289_i0forward_frame_1 - 1.6e-05 23.5 8.4 2.5e-05 22.9 4.7 2.0 1 1 1 2 2 2 2 Membrane transport protein Sporozoite_P67 PF05642.11 NODE_38616_length_546_cov_98.866928_g31272_i0reverse_frame_1 - 0.16 10.0 7.4 0.18 9.9 7.4 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen ApbA_C PF08546.11 NODE_38608_length_546_cov_144.863014_g31264_i0reverse_frame_1 - 1.1e-31 109.6 0.0 1.4e-31 109.3 0.0 1.1 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal Tektin PF03148.14 NODE_38602_length_546_cov_173.790607_g31259_i0forward_frame_1 - 2.7e-07 29.7 7.1 3.2e-07 29.5 7.1 1.2 1 0 0 1 1 1 1 Tektin family Conotoxin_I2 PF17557.2 NODE_38596_length_546_cov_333.481409_g31253_i0forward_frame_1 - 2.5 8.3 14.0 1.2 9.3 3.0 2.4 2 0 0 2 2 2 0 I2-superfamily conotoxins HTH_26 PF13443.6 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_3 - 8e-06 26.2 1.6 1.4 9.4 0.0 3.6 4 0 0 4 4 4 2 Cro/C1-type HTH DNA-binding domain CARD_2 PF16739.5 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_3 - 0.0066 16.4 0.0 6.8 6.8 0.0 3.1 3 0 0 3 3 3 2 Caspase recruitment domain CENP-M PF11111.8 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_3 - 0.023 13.9 1.1 3 7.0 0.0 2.8 3 0 0 3 3 3 0 Centromere protein M (CENP-M) DUF4714 PF15833.5 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_3 - 0.13 12.2 3.7 17 5.3 0.1 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4714) HTH_IclR PF09339.10 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_3 - 0.62 9.9 6.6 2.8 7.8 0.0 3.6 3 1 1 4 4 4 0 IclR helix-turn-helix domain PcF PF09461.10 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_3 - 3.2 8.2 6.7 79 3.7 0.2 3.5 3 0 0 3 3 3 0 Phytotoxin PcF protein HTH_26 PF13443.6 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_2 - 0.024 15.0 1.3 2 8.9 0.1 3.5 4 1 0 4 4 4 0 Cro/C1-type HTH DNA-binding domain AbiEi_4 PF13338.6 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_2 - 0.61 10.3 4.8 29 4.9 0.1 3.2 3 0 0 3 3 3 0 Transcriptional regulator, AbiEi antitoxin DprA_WH PF17782.1 NODE_38578_length_547_cov_8.451098_g31235_i0reverse_frame_2 - 5.8 7.1 5.5 78 3.5 0.1 3.2 3 0 0 3 3 3 0 DprA winged helix domain ALF PF03752.13 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_3 - 0.065 13.2 0.1 15 5.7 0.0 2.5 2 0 0 2 2 2 0 Short repeats of unknown function P19Arf_N PF07392.12 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_3 - 0.11 13.0 0.4 1.7 9.2 0.1 2.5 2 0 0 2 2 2 0 Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus Bowman-Birk_leg PF00228.20 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_3 - 0.47 10.9 3.5 17 5.9 0.1 3.8 3 0 0 3 3 3 0 Bowman-Birk serine protease inhibitor family ALF PF03752.13 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_2 - 0.035 14.1 0.3 4.8 7.2 0.0 3.4 4 0 0 4 4 4 0 Short repeats of unknown function P19Arf_N PF07392.12 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_2 - 0.12 12.8 6.2 8.9 6.9 0.4 3.5 3 0 0 3 3 3 0 Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus RINGv PF12906.7 NODE_38578_length_547_cov_8.451098_g31235_i0forward_frame_2 - 4.3 7.6 6.7 3.5 7.8 0.7 2.9 3 0 0 3 3 3 0 RING-variant domain Carbam_trans_N PF02543.15 NODE_38546_length_547_cov_503.835938_g31206_i0forward_frame_3 - 0.08 12.6 0.1 0.1 12.2 0.1 1.1 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus DUF2574 PF10836.8 NODE_38534_length_548_cov_2.807018_g31196_i0forward_frame_3 - 0.059 13.3 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) DUF2575 PF10837.8 NODE_38531_length_548_cov_3.801170_g31193_i0reverse_frame_3 - 6.3e-35 119.3 1.9 1.1e-34 118.5 1.9 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2575) GSG-1 PF07803.11 NODE_38530_length_548_cov_4.079922_g31146_i1reverse_frame_3 - 0.32 10.9 2.2 0.86 9.5 2.2 1.7 1 0 0 1 1 1 0 GSG1-like protein HTH_38 PF13936.6 NODE_38530_length_548_cov_4.079922_g31146_i1forward_frame_3 - 0.15 11.9 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks132.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks132.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks132.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks132.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:02:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AMP-binding_C PF13193.6 NODE_38520_length_548_cov_63.808967_g31183_i0forward_frame_3 - 8e-19 68.4 0.1 1.2e-18 67.8 0.1 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 NODE_38520_length_548_cov_63.808967_g31183_i0forward_frame_3 - 2.8e-09 36.1 0.1 3.9e-09 35.6 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme Pilus_CpaD PF09476.10 NODE_38518_length_548_cov_78.898635_g31181_i0forward_frame_3 - 0.14 11.9 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) DAP_B PF07930.12 NODE_38503_length_548_cov_264.506823_g31166_i0reverse_frame_3 - 0.091 12.7 0.8 0.26 11.2 0.1 1.8 2 0 0 2 2 2 0 D-aminopeptidase, domain B PH_BEACH PF14844.6 NODE_38491_length_548_cov_37549.317739_g31156_i0reverse_frame_3 - 1.2e-07 31.8 0.3 2.1e-07 30.9 0.3 1.4 1 0 0 1 1 1 1 PH domain associated with Beige/BEACH ETF PF01012.21 NODE_38485_length_549_cov_3.206226_g31150_i0forward_frame_3 - 3.1e-29 102.2 1.1 3.8e-29 101.9 1.1 1.0 1 0 0 1 1 1 1 Electron transfer flavoprotein domain MFS_1 PF07690.16 NODE_38482_length_549_cov_4.249027_g31147_i0reverse_frame_2 - 3e-15 56.0 6.2 3.5e-15 55.8 6.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily GSG-1 PF07803.11 NODE_38481_length_549_cov_4.334630_g31146_i0reverse_frame_3 - 0.28 11.1 2.2 0.86 9.5 2.2 1.8 1 0 0 1 1 1 0 GSG1-like protein BTB PF00651.31 NODE_38479_length_549_cov_53.972763_g31144_i0forward_frame_3 - 0.0078 16.4 0.2 0.012 15.8 0.2 1.3 1 0 0 1 1 1 1 BTB/POZ domain DUF3916 PF13079.6 NODE_38479_length_549_cov_53.972763_g31144_i0forward_frame_3 - 0.57 10.1 6.8 2.9 7.8 0.7 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF3916) ECH_1 PF00378.20 NODE_38464_length_549_cov_115.293774_g31130_i0reverse_frame_2 - 7.2e-12 45.2 0.0 8.6e-12 44.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase PAM2 PF07145.15 NODE_38460_length_549_cov_132.097276_g31127_i0reverse_frame_3 - 0.013 15.2 0.4 0.16 11.7 0.0 2.6 2 0 0 2 2 2 0 Ataxin-2 C-terminal region SRC-1 PF08832.10 NODE_38460_length_549_cov_132.097276_g31127_i0reverse_frame_2 - 0.099 13.7 1.1 0.18 12.9 1.1 1.4 1 0 0 1 1 1 0 Steroid receptor coactivator DUF4687 PF15747.5 NODE_38456_length_549_cov_167.871595_g31123_i0reverse_frame_3 - 0.14 12.6 2.2 0.23 12.0 2.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4687) Ion_trans PF00520.31 NODE_38455_length_549_cov_198.429961_g31122_i0forward_frame_2 - 4.1e-07 29.5 10.5 5.1e-07 29.2 10.5 1.1 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 NODE_38455_length_549_cov_198.429961_g31122_i0forward_frame_2 - 0.022 14.6 7.9 0.013 15.4 5.5 1.8 2 1 0 2 2 2 0 Ligand-gated ion channel DUF4750 PF15938.5 NODE_38455_length_549_cov_198.429961_g31122_i0forward_frame_2 - 5.7 6.7 9.9 0.36 10.5 3.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) zf-LITAF-like PF10601.9 NODE_38452_length_549_cov_222.392996_g31119_i0reverse_frame_3 - 0.072 13.4 2.4 0.13 12.6 2.4 1.4 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Ank_4 PF13637.6 ORF98115 - 0.01 16.4 0.0 3.9 8.2 0.0 2.4 2 0 0 2 2 2 0 Ankyrin repeats (many copies) NUDIX PF00293.28 ORF96992 - 2.6e-08 34.0 0.0 3.3e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Asp PF00026.23 ORF95174 - 4.5e-06 26.3 0.1 6.5e-06 25.8 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease HA PF03457.14 ORF94660 - 0.0038 17.5 0.0 0.0068 16.7 0.0 1.4 1 0 0 1 1 1 1 Helicase associated domain XK-related PF09815.9 ORF91673 - 0.034 13.2 0.0 0.046 12.8 0.0 1.3 1 1 0 1 1 1 0 XK-related protein EF-hand_5 PF13202.6 ORF888 - 0.00032 20.1 0.0 0.00066 19.1 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF888 - 0.0053 16.6 0.0 0.022 14.7 0.0 1.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF888 - 0.006 16.1 0.0 0.02 14.4 0.0 1.8 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF888 - 0.019 14.8 0.0 0.036 13.9 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_7 PF13499.6 ORF888 - 0.034 14.6 0.0 0.049 14.1 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair Asp PF00026.23 ORF87282 - 3.4e-08 33.3 0.0 4.9e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease PerB PF06590.11 ORF86920 - 0.015 15.8 1.1 0.022 15.3 1.1 1.2 1 0 0 1 1 1 0 PerB protein Pkinase PF00069.25 ORF86627 - 0.00027 20.4 0.0 0.00041 19.8 0.0 1.3 1 1 0 1 1 1 1 Protein kinase domain Astro_capsid_p PF12226.8 ORF86627 - 0.085 12.0 5.3 0.097 11.8 5.3 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF86627 - 0.22 9.7 12.6 0.22 9.7 12.6 1.1 1 0 0 1 1 1 0 Nop14-like family DUF2535 PF10751.9 ORF86627 - 0.24 11.9 3.2 1.2 9.7 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2535) NOA36 PF06524.12 ORF86627 - 1.2 8.4 9.2 1.4 8.1 9.2 1.3 1 0 0 1 1 1 0 NOA36 protein CDC45 PF02724.14 ORF86627 - 2.1 6.6 10.7 2.3 6.4 10.7 1.1 1 0 0 1 1 1 0 CDC45-like protein CobT PF06213.12 ORF86627 - 2.1 7.7 12.9 2.7 7.3 12.9 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT IF-2 PF11987.8 ORF86407 - 1.3e-10 41.3 0.0 1.8e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Translation-initiation factor 2 Fimbrial PF00419.20 ORF83507 - 2.4e-14 53.9 12.3 3e-14 53.5 12.3 1.1 1 0 0 1 1 1 1 Fimbrial protein DUF4369 PF14289.6 ORF83507 - 2.4e-05 24.7 3.0 0.00048 20.6 1.2 2.4 1 1 1 2 2 2 2 Domain of unknown function (DUF4369) Homeobox_KN PF05920.11 ORF83291 - 4.7e-14 52.0 0.5 8.6e-14 51.2 0.5 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF83291 - 1.4e-08 34.5 0.5 1.4e-08 34.5 0.5 1.8 2 0 0 2 2 2 1 Homeodomain Homez PF11569.8 ORF83291 - 0.056 12.9 0.1 0.1 12.1 0.1 1.4 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez INSC_LBD PF16748.5 ORF83291 - 0.07 12.6 0.5 0.13 11.7 0.5 1.4 1 0 0 1 1 1 0 Inscuteable LGN-binding domain HTH_36 PF13730.6 ORF83291 - 0.093 12.7 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain NAD_binding_6 PF08030.12 ORF83175 - 5.1e-05 23.4 0.1 0.00011 22.4 0.1 1.6 1 1 0 1 1 1 1 Ferric reductase NAD binding domain TFIIIC_delta PF12657.7 ORF83175 - 0.017 15.1 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Transcription factor IIIC subunit delta N-term Lipase PF00151.19 ORF8064 - 0.065 12.5 1.3 0.087 12.1 1.1 1.2 1 1 0 1 1 1 0 Lipase Elf4 PF07011.11 ORF8064 - 0.068 13.1 2.7 2.9 7.9 0.1 2.4 2 0 0 2 2 2 0 Early Flowering 4 domain Orexin PF02072.15 ORF79037 - 7.2e-05 22.7 1.2 0.00012 22.0 1.2 1.3 1 0 0 1 1 1 1 Prepro-orexin Ribosomal_L6e PF01159.19 ORF77834 - 5.4e-25 88.1 3.2 5.4e-25 88.1 3.2 1.7 2 1 0 2 2 2 1 Ribosomal protein L6e Asp PF00026.23 ORF77465 - 2.2e-06 27.3 0.0 3.3e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF2607 PF10795.9 ORF74780 - 0.045 13.9 0.6 0.085 13.0 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2607) DnaJ PF00226.31 ORF73954 - 2.5e-09 37.1 0.0 4e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain Asp PF00026.23 ORF73129 - 1.4e-06 27.9 0.0 1.9e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Peptidase_M13 PF01431.21 ORF73129 - 0.031 13.9 0.8 0.038 13.6 0.1 1.5 2 0 0 2 2 2 0 Peptidase family M13 Mob1_phocein PF03637.17 ORF73129 - 0.066 13.2 0.0 0.085 12.9 0.0 1.2 1 0 0 1 1 1 0 Mob1/phocein family cNMP_binding PF00027.29 ORF70901 - 5.6e-08 32.7 0.0 0.0013 18.8 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain VESA1_N PF12785.7 ORF69470 - 0.17 10.8 5.5 0.18 10.8 5.5 1.1 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Dimeth_Pyl PF09505.10 ORF69083 - 0.06 11.9 0.1 0.067 11.7 0.1 1.1 1 0 0 1 1 1 0 Dimethylamine methyltransferase (Dimeth_PyL) MORN PF02493.20 ORF67590 - 0.0002 21.1 0.7 0.0055 16.5 0.0 2.8 3 0 0 3 3 3 1 MORN repeat AbiEi_2 PF09952.9 ORF65185 - 0.034 14.4 0.0 0.063 13.5 0.0 1.5 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin, Type IV TA system CbtA_toxin PF06755.12 ORF6503 - 8.7e-56 186.7 0.0 1.2e-55 186.2 0.0 1.2 1 0 0 1 1 1 1 CbtA_toxin of type IV toxin-antitoxin system Homeodomain PF00046.29 ORF64739 - 6.4e-05 22.7 0.2 0.00013 21.7 0.2 1.5 1 0 0 1 1 1 1 Homeodomain HTH_7 PF02796.15 ORF64739 - 0.038 14.1 0.0 0.093 12.8 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_23 PF13384.6 ORF64739 - 0.12 12.2 0.0 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.6 ORF64739 - 0.16 12.0 0.0 0.33 11.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Phage_AlpA PF05930.12 ORF64739 - 0.17 11.8 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) CT_C_D PF02682.16 ORF64739 - 0.2 11.4 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 Carboxyltransferase domain, subdomain C and D Cas_DxTHG PF09455.10 ORF63891 - 0.0065 16.1 1.1 0.0079 15.8 1.1 1.1 1 0 0 1 1 1 1 CRISPR-associated (Cas) DxTHG family TBCA PF02970.16 ORF63891 - 0.042 14.2 0.5 0.076 13.4 0.5 1.5 1 0 0 1 1 1 0 Tubulin binding cofactor A ParD_antitoxin PF03693.14 ORF63891 - 0.13 12.7 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH TNFR_c6 PF00020.18 ORF60886 - 0.066 13.6 2.5 0.066 13.6 2.5 1.8 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region Plasmodium_Vir PF05795.11 ORF60060 - 6.6 6.0 5.5 7.4 5.9 5.5 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein eIF_4G1 PF12152.8 ORF57714 - 0.00049 20.2 0.3 0.00049 20.2 0.3 2.1 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 4G1 Peptidase_S49_N PF08496.10 ORF57714 - 1.2 9.2 4.1 1.8 8.7 4.1 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Thioredoxin_9 PF14595.6 ORF56393 - 0.073 12.8 0.3 0.13 12.0 0.3 1.3 1 0 0 1 1 1 0 Thioredoxin PDZ_1 PF12812.7 ORF55243 - 0.083 12.9 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 PDZ-like domain Uteroglobin PF01099.17 ORF55150 - 0.0091 16.3 0.1 0.022 15.1 0.1 1.6 1 0 0 1 1 1 1 Uteroglobin family Rbx_binding PF18113.1 ORF54791 - 2 8.2 4.9 3.1 7.6 0.2 2.7 2 1 1 3 3 3 0 Rubredoxin binding C-terminal domain MDH PF02315.16 ORF53502 - 0.066 13.3 0.2 0.14 12.2 0.2 1.6 1 0 0 1 1 1 0 Methanol dehydrogenase beta subunit Sulphotransf PF09037.10 ORF52282 - 0.045 13.3 0.5 0.08 12.5 0.5 1.5 1 0 0 1 1 1 0 Stf0 sulphotransferase DSPc PF00782.20 ORF51453 - 0.086 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain SBP_bac_5 PF00496.22 ORF51027 - 9.9e-17 60.9 0.8 9.9e-17 60.9 0.8 1.4 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 5 Middle OpuAC PF04069.12 ORF51027 - 0.0032 17.1 0.1 0.0046 16.6 0.1 1.2 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system DUF4120 PF13496.6 ORF51027 - 0.047 14.1 0.1 0.14 12.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) DpaA_N PF16924.5 ORF50324 - 0.047 13.8 0.1 0.082 13.0 0.1 1.5 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain Neurensin PF14927.6 ORF49024 - 0.031 14.0 0.1 0.057 13.1 0.1 1.4 1 0 0 1 1 1 0 Neurensin Wzy_C PF04932.15 ORF47522 - 0.17 11.5 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase DAGK_cat PF00781.24 ORF47472 - 1.1e-21 76.8 0.0 1.5e-21 76.3 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain ResIII PF04851.15 ORF47149 - 0.11 12.5 5.5 0.038 14.0 2.9 1.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit RPT PF13446.6 ORF47149 - 0.15 12.0 1.3 5.7 6.9 0.2 2.4 2 0 0 2 2 2 0 A repeated domain in UCH-protein 2OG-FeII_Oxy_2 PF13532.6 ORF46915 - 1.6e-08 35.0 0.0 2.1e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Rbx_binding PF18113.1 ORF43347 - 2 8.2 4.9 3.1 7.6 0.2 2.7 2 1 1 3 3 3 0 Rubredoxin binding C-terminal domain Kelch_1 PF01344.25 ORF4173 - 0.0013 18.2 0.6 0.0049 16.4 0.2 2.1 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 ORF4173 - 0.049 13.9 1.1 0.59 10.5 0.1 2.8 3 0 0 3 3 3 0 Kelch motif IMUP PF15761.5 ORF38231 - 0.36 11.6 2.4 0.56 10.9 2.4 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein Aldedh PF00171.22 ORF38082 - 1.3e-05 23.9 0.0 1.7e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Arabinose_Iso_C PF11762.8 ORF38082 - 0.076 12.8 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 L-arabinose isomerase C-terminal domain SH3_3 PF08239.11 ORF36145 - 0.00024 21.3 0.8 0.0064 16.7 0.0 2.8 2 1 1 3 3 3 1 Bacterial SH3 domain Bac_DNA_binding PF00216.21 ORF35309 - 0.00024 21.2 0.0 0.00037 20.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial DNA-binding protein Ribosomal_L6e PF01159.19 ORF35033 - 5.4e-25 88.1 3.2 5.4e-25 88.1 3.2 1.7 2 1 0 2 2 2 1 Ribosomal protein L6e Trp_leader2 PF08056.11 ORF31433 - 0.023 14.7 1.7 0.048 13.6 1.7 1.5 1 0 0 1 1 1 0 Tryptophan operon leader peptide Wzy_C PF04932.15 ORF30418 - 0.17 11.5 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF5538 PF17692.1 ORF29003 - 0.25 11.4 8.8 1.2 9.2 0.7 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5538) MNHE PF01899.16 ORF26513 - 0.16 11.7 0.6 0.42 10.4 0.2 1.8 2 0 0 2 2 2 0 Na+/H+ ion antiporter subunit Chromate_transp PF02417.15 ORF26513 - 0.46 10.6 3.5 5.4 7.1 3.5 2.3 1 1 0 1 1 1 0 Chromate transporter Stc1 PF12898.7 ORF26513 - 0.61 10.7 8.8 2.5 8.7 0.1 3.2 2 1 1 3 3 3 0 Stc1 domain CorA PF01544.18 ORF26319 - 0.1 11.9 0.9 0.27 10.5 0.9 1.7 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein TetR_C_29 PF17938.1 ORF26319 - 0.14 12.2 0.2 1.8 8.6 0.2 2.3 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Lipase PF00151.19 ORF25540 - 0.065 12.5 1.3 0.087 12.1 1.1 1.2 1 1 0 1 1 1 0 Lipase Elf4 PF07011.11 ORF25540 - 0.068 13.1 2.7 2.9 7.9 0.1 2.4 2 0 0 2 2 2 0 Early Flowering 4 domain zf-U1 PF06220.12 ORF25336 - 3.7e-16 58.6 1.0 6.1e-16 57.9 1.0 1.4 1 0 0 1 1 1 1 U1 zinc finger DUF2418 PF10332.9 ORF24846 - 0.059 13.9 0.2 0.14 12.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2418) DpaA_N PF16924.5 ORF22020 - 0.047 13.8 0.1 0.082 13.0 0.1 1.5 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain Asn_synthase PF00733.21 ORF20893 - 8e-14 52.1 0.0 1e-13 51.7 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase DIRP PF06584.13 ORF20349 - 6.7 6.9 8.5 1.8 8.8 2.1 2.2 1 1 1 2 2 2 0 DIRP Cwf_Cwc_15 PF04889.12 ORF20078 - 0.026 14.3 16.0 0.03 14.0 16.0 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Nop14 PF04147.12 ORF20078 - 0.031 12.5 18.9 0.035 12.3 18.9 1.1 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 ORF20078 - 0.083 12.3 20.0 0.092 12.2 20.0 1.1 1 0 0 1 1 1 0 SDA1 NPR3 PF03666.13 ORF20078 - 0.14 10.9 9.3 0.18 10.6 9.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF913 PF06025.12 ORF20078 - 0.25 10.3 3.3 0.3 10.0 3.3 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) CDC45 PF02724.14 ORF20078 - 0.33 9.2 13.3 0.36 9.1 13.3 1.1 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF20078 - 0.66 8.0 18.2 0.77 7.8 18.2 1.3 1 0 0 1 1 1 0 DNA polymerase phi Smg8_Smg9 PF10220.9 ORF20078 - 1.2 7.3 7.1 1.5 7.0 7.1 1.0 1 0 0 1 1 1 0 Smg8_Smg9 Neur_chan_memb PF02932.16 ORF20078 - 1.4 8.9 3.4 1.5 8.8 3.4 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Presenilin PF01080.17 ORF20078 - 3.4 6.3 8.3 3.8 6.2 8.3 1.1 1 0 0 1 1 1 0 Presenilin ALMT PF11744.8 ORF20078 - 3.5 6.4 6.2 3.8 6.2 6.2 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Hid1 PF12722.7 ORF20078 - 4.1 5.4 8.8 4.5 5.3 8.8 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF4746 PF15928.5 ORF20078 - 9.5 5.5 22.2 2.4 7.5 19.1 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4746) RibD_C PF01872.17 ORF17765 - 0.17 11.7 0.1 0.26 11.1 0.1 1.2 1 0 0 1 1 1 0 RibD C-terminal domain GT87 PF09594.10 ORF17477 - 0.00018 21.3 2.1 0.00025 20.9 2.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 87 GCD14 PF08704.10 ORF150636 - 2.1 7.9 8.3 4.2 7.0 8.4 1.6 1 1 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Ndc1_Nup PF09531.10 ORF150636 - 9.5 4.8 8.0 11 4.5 8.0 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF4548 PF15081.6 ORF146222 - 0.078 12.8 1.7 1 9.1 0.5 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4548) DUF1706 PF08020.11 ORF146222 - 0.53 10.2 4.5 1.1 9.2 4.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1706) eIF_4G1 PF12152.8 ORF144916 - 0.00049 20.2 0.3 0.00049 20.2 0.3 2.1 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 4G1 Peptidase_S49_N PF08496.10 ORF144916 - 1.2 9.2 4.1 1.8 8.7 4.1 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal PAC4 PF16093.5 ORF143917 - 0.068 13.4 0.3 0.15 12.2 0.3 1.7 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 YfhO PF09586.10 ORF143772 - 0.42 8.8 5.6 0.43 8.7 5.6 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO ParG PF09274.10 ORF143215 - 0.052 13.7 0.1 0.26 11.5 0.0 2.1 2 1 0 2 2 2 0 ParG Plasmodium_Vir PF05795.11 ORF14217 - 0.00051 19.6 1.3 0.00058 19.4 1.3 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein MscS_TM PF12794.7 ORF14217 - 0.0016 17.4 5.0 0.0016 17.4 5.0 1.9 1 1 1 2 2 1 1 Mechanosensitive ion channel inner membrane domain 1 CDC45 PF02724.14 ORF14217 - 0.0043 15.4 12.6 0.0045 15.4 12.6 1.1 1 0 0 1 1 1 1 CDC45-like protein RR_TM4-6 PF06459.12 ORF14217 - 0.033 14.0 15.3 0.044 13.6 15.3 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 BSMAP PF12280.8 ORF14217 - 0.037 14.2 5.9 0.087 13.0 5.9 1.6 1 1 0 1 1 1 0 Brain specific membrane anchored protein DUF913 PF06025.12 ORF14217 - 0.049 12.6 4.5 0.063 12.3 4.5 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF2207 PF09972.9 ORF14217 - 0.058 12.2 2.6 0.097 11.4 2.6 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) LAP1C PF05609.12 ORF14217 - 0.059 12.5 9.3 0.068 12.3 9.3 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) DUF2828 PF11443.8 ORF14217 - 0.063 11.4 5.2 0.078 11.1 5.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) EOS1 PF12326.8 ORF14217 - 0.12 12.4 0.1 0.18 11.7 0.1 1.3 1 0 0 1 1 1 0 N-glycosylation protein DDHD PF02862.17 ORF14217 - 0.12 12.5 2.2 0.14 12.3 2.2 1.2 1 0 0 1 1 1 0 DDHD domain ALMT PF11744.8 ORF14217 - 0.14 11.0 7.2 0.16 10.8 7.2 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter SLC12 PF03522.15 ORF14217 - 0.18 10.8 7.8 0.19 10.7 7.8 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Hid1 PF12722.7 ORF14217 - 0.21 9.7 8.8 0.25 9.4 8.8 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Granin PF01271.17 ORF14217 - 0.23 10.3 30.0 0.27 10.1 30.0 1.0 1 0 0 1 1 1 0 Granin (chromogranin or secretogranin) CSG2 PF16965.5 ORF14217 - 0.28 10.1 5.1 0.47 9.4 5.1 1.5 1 1 0 1 1 1 0 Ceramide synthase regulator DUF2052 PF09747.9 ORF14217 - 0.28 11.3 23.2 0.39 10.8 23.2 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Tho2 PF11262.8 ORF14217 - 0.31 10.2 7.4 0.4 9.8 7.4 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Orf78 PF06024.12 ORF14217 - 0.35 11.2 6.0 2.7 8.4 6.0 2.1 1 1 0 1 1 1 0 Orf78 (ac78) FAM60A PF15396.6 ORF14217 - 0.52 10.3 5.2 0.6 10.1 5.2 1.2 1 0 0 1 1 1 0 Protein Family FAM60A CENP-N PF05238.13 ORF14217 - 0.72 9.1 7.5 0.81 8.9 7.5 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like V_ATPase_I PF01496.19 ORF14217 - 0.77 7.6 11.0 0.86 7.4 11.0 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BUD22 PF09073.10 ORF14217 - 0.82 8.9 23.8 1 8.6 23.8 1.1 1 0 0 1 1 1 0 BUD22 SDA1 PF05285.12 ORF14217 - 0.83 9.0 31.4 1 8.7 31.4 1.1 1 0 0 1 1 1 0 SDA1 Borrelia_P83 PF05262.11 ORF14217 - 0.92 7.9 15.2 0.91 7.9 15.2 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein Nop14 PF04147.12 ORF14217 - 1.9 6.6 29.4 2.2 6.4 29.4 1.0 1 0 0 1 1 1 0 Nop14-like family DUF4045 PF13254.6 ORF14217 - 2.1 7.9 14.2 2.4 7.7 14.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) Vfa1 PF08432.10 ORF14217 - 2.3 8.5 21.1 3 8.2 21.1 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 NPR3 PF03666.13 ORF14217 - 3.3 6.4 12.1 4.2 6.1 12.1 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CLN3 PF02487.17 ORF14217 - 3.9 6.4 8.1 5.3 6.0 8.0 1.3 1 1 0 1 1 1 0 CLN3 protein AAA_11 PF13086.6 ORF14217 - 7.5 6.3 12.9 9.5 5.9 12.9 1.1 1 0 0 1 1 1 0 AAA domain NARP1 PF12569.8 ORF14217 - 8 5.2 16.5 9.9 4.9 16.5 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 zf-NOSIP PF15906.5 ORF140670 - 0.091 12.9 0.2 0.2 11.8 0.2 1.5 1 0 0 1 1 1 0 Zinc-finger of nitric oxide synthase-interacting protein ZnuA PF01297.17 ORF139900 - 0.02 14.3 0.0 0.024 14.0 0.0 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Gp-FAR-1 PF05823.12 ORF139900 - 0.039 14.3 0.3 0.06 13.7 0.3 1.4 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) LPP PF04728.13 ORF139900 - 0.051 14.0 0.4 6.2 7.3 0.1 3.1 2 1 1 3 3 3 0 Lipoprotein leucine-zipper UPF0122 PF04297.14 ORF139900 - 0.056 13.7 1.2 0.056 13.7 1.2 2.2 2 1 1 3 3 3 0 Putative helix-turn-helix protein, YlxM / p13 like COMPASS-Shg1 PF05205.12 ORF139900 - 0.062 14.0 3.1 0.14 12.9 2.0 1.9 1 1 1 2 2 2 0 COMPASS (Complex proteins associated with Set1p) component shg1 Alpha-E PF04168.12 ORF139900 - 0.093 12.5 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. FlaC_arch PF05377.11 ORF139900 - 0.11 12.9 0.4 0.26 11.7 0.3 1.7 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) zf-HIT PF04438.16 ORF139900 - 0.23 11.3 4.4 6.6 6.7 0.5 2.6 2 0 0 2 2 2 0 HIT zinc finger MTHFR_C PF12225.8 ORF139824 - 0.25 11.0 3.5 0.13 11.9 1.1 1.8 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal DUF3772 PF12607.8 ORF138473 - 0.35 10.6 3.3 0.67 9.8 1.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3772) Asp PF00026.23 ORF136780 - 8.2e-07 28.7 0.0 1.2e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease NPAT_C PF15712.5 ORF133592 - 0.022 13.5 13.2 0.021 13.5 10.7 1.9 2 0 0 2 2 2 0 NPAT C terminus Ly49 PF08391.10 ORF133592 - 0.51 10.7 5.2 0.98 9.8 0.1 2.1 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region UDPGT PF00201.18 ORF132777 - 0.017 13.9 0.2 0.019 13.8 0.2 1.1 1 0 0 1 1 1 0 UDP-glucoronosyl and UDP-glucosyl transferase CBP_BcsF PF11120.8 ORF132777 - 0.089 12.9 0.1 0.21 11.7 0.1 1.6 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF PCO_ADO PF07847.12 ORF132777 - 0.37 10.2 0.1 0.37 10.2 0.1 1.8 2 0 0 2 2 2 0 PCO_ADO DUF5090 PF17009.5 ORF132754 - 0.046 13.7 5.3 1.4 8.8 3.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5090) 7TMR-DISM_7TM PF07695.11 ORF132754 - 1 9.2 9.6 2 8.2 9.6 1.5 1 1 0 1 1 1 0 7TM diverse intracellular signalling Peptidase_S24 PF00717.23 ORF131185 - 2.4e-08 33.8 0.2 4e-08 33.1 0.2 1.5 1 0 0 1 1 1 1 Peptidase S24-like DHHC PF01529.20 ORF130761 - 0.027 14.6 3.9 0.042 13.9 3.9 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Lig_chan PF00060.26 ORF130761 - 0.062 13.1 1.0 0.11 12.3 0.9 1.4 1 1 0 1 1 1 0 Ligand-gated ion channel DUF2614 PF11023.8 ORF130761 - 1 9.5 4.1 0.3 11.2 0.3 1.8 2 0 0 2 2 2 0 Zinc-ribbon containing domain DSPc PF00782.20 ORF129252 - 1.9e-05 24.5 1.2 1.9e-05 24.5 1.2 1.9 2 1 0 2 2 2 1 Dual specificity phosphatase, catalytic domain DUF1189 PF06691.11 ORF129252 - 0.12 11.9 7.7 0.15 11.6 7.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) Glyco_hydro_16 PF00722.21 ORF127687 - 0.00013 21.5 0.4 0.00022 20.8 0.4 1.6 1 1 0 1 1 1 1 Glycosyl hydrolases family 16 Ank_4 PF13637.6 ORF127655 - 6.9e-07 29.7 0.1 0.00044 20.8 0.1 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF127655 - 2.1e-06 28.2 0.1 0.0085 16.7 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF127655 - 6.7e-06 26.3 0.0 1.5e-05 25.1 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF127655 - 0.00014 22.1 0.1 1.4 9.5 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF127655 - 0.2 12.3 0.2 9.6 7.2 0.0 3.2 3 1 1 4 4 4 0 Ankyrin repeat Symplekin_C PF12295.8 ORF126025 - 1e-33 117.0 0.1 1.3e-33 116.7 0.1 1.1 1 0 0 1 1 1 1 Symplekin tight junction protein C terminal DUF913 PF06025.12 ORF124614 - 0.015 14.3 0.1 0.018 14.0 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) YcgR_2 PF12945.7 ORF124614 - 0.12 12.5 0.2 15 5.8 0.0 3.0 2 1 1 3 3 3 0 Flagellar protein YcgR DpaA_N PF16924.5 ORF124470 - 0.046 13.8 0.1 0.082 13.0 0.1 1.5 1 0 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain DUF4094 PF13334.6 ORF124470 - 9.4 6.7 7.5 1.9 8.9 2.3 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4094) zf-B_box PF00643.24 ORF124144 - 0.017 15.2 5.9 0.05 13.8 5.9 1.8 1 0 0 1 1 1 0 B-box zinc finger Gln-synt_C-ter PF18318.1 ORF124144 - 0.031 14.1 2.3 0.049 13.5 2.3 1.3 1 0 0 1 1 1 0 Glutamine synthetase C-terminal domain DUF5412 PF17428.2 ORF123483 - 0.054 13.3 0.0 0.086 12.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5412) Methyltransf_4 PF02390.17 ORF122957 - 5.8e-43 146.3 0.0 6.7e-43 146.1 0.0 1.0 1 0 0 1 1 1 1 Putative methyltransferase Tic22 PF04278.12 ORF122957 - 0.11 11.9 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Tic22-like family DUF3446 PF11928.8 ORF122522 - 1.1 9.6 8.1 2.6 8.4 0.0 2.2 2 0 0 2 2 2 0 Early growth response N-terminal domain Ribosomal_L6e PF01159.19 ORF118883 - 5.4e-25 88.1 3.2 5.4e-25 88.1 3.2 1.7 2 1 0 2 2 2 1 Ribosomal protein L6e DDDD PF10161.9 ORF117852 - 0.3 10.9 1.1 4.1 7.2 0.1 2.9 3 0 0 3 3 3 0 Putative mitochondrial precursor protein DUF3894 PF13033.6 ORF117852 - 1.6 8.9 9.7 12 6.1 0.1 3.9 2 1 2 4 4 4 0 Protein of unknown function (DUF3894) Bac_RepA_C PF18008.1 ORF117398 - 0.091 13.1 2.2 0.22 11.9 0.2 2.2 2 0 0 2 2 2 0 Replication initiator protein A C-terminal domain SOAR PF16533.5 ORF117398 - 0.31 11.0 5.8 2.3 8.3 0.1 2.5 1 1 1 2 2 2 0 STIM1 Orai1-activating region TMEM138 PF14935.6 ORF11707 - 1.6e-12 48.1 6.3 1.6e-12 48.1 6.3 1.5 2 0 0 2 2 2 1 Transmembrane protein 138 DJ-1_PfpI PF01965.24 ORF113145 - 9.2e-56 188.2 0.0 1e-55 188.0 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 ORF113145 - 0.00022 21.1 0.0 0.00026 20.8 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF113145 - 0.0027 17.5 0.0 0.0064 16.3 0.0 1.8 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 ORF113145 - 0.013 15.1 0.0 0.022 14.4 0.0 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 ORF113145 - 0.022 14.6 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 SNO glutamine amidotransferase family GATase_5 PF13507.6 ORF113145 - 0.21 10.6 0.0 0.4 9.7 0.0 1.6 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Lipase PF00151.19 ORF111287 - 0.065 12.5 1.3 0.087 12.1 1.1 1.2 1 1 0 1 1 1 0 Lipase Elf4 PF07011.11 ORF111287 - 0.068 13.1 2.7 2.9 7.9 0.1 2.4 2 0 0 2 2 2 0 Early Flowering 4 domain FUSC PF04632.12 ORF110447 - 0.073 11.6 9.7 0.094 11.2 9.7 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Peptidase_U4 PF03419.13 ORF105818 - 0.1 11.8 0.1 0.16 11.2 0.1 1.2 1 0 0 1 1 1 0 Sporulation factor SpoIIGA FHIPEP PF00771.20 ORF105818 - 0.11 11.0 0.1 0.13 10.7 0.1 1.1 1 0 0 1 1 1 0 FHIPEP family CHIP_TPR_N PF18391.1 ORF105818 - 5.8 7.7 7.3 9.5 7.1 3.9 2.8 2 1 0 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain Amidohydro_3 PF07969.11 ORF103009 - 0.013 15.0 0.3 0.017 14.6 0.3 1.1 1 0 0 1 1 1 0 Amidohydrolase family DUF3021 PF11457.8 ORF101364 - 1.1 9.6 11.7 0.4 11.0 6.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3021) ResIII PF04851.15 ORF10008 - 0.11 12.5 5.5 0.038 14.0 2.9 1.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit RPT PF13446.6 ORF10008 - 0.15 12.0 1.3 5.7 6.9 0.2 2.4 2 0 0 2 2 2 0 A repeated domain in UCH-protein EcsB PF05975.12 NODE_38861_length_541_cov_6.452569_g31505_i0reverse_frame_1 - 0.31 9.9 4.2 0.37 9.6 4.2 1.1 1 0 0 1 1 1 0 Bacterial ABC transporter protein EcsB PPR PF01535.20 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 4.5e-07 29.7 0.1 0.38 11.1 0.0 4.1 4 0 0 4 4 4 2 PPR repeat PPR_2 PF13041.6 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 1.8e-05 24.8 0.0 0.045 14.0 0.0 3.5 4 0 0 4 4 4 1 PPR repeat family PPR_long PF17177.4 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 0.0015 17.9 0.2 0.0087 15.4 0.2 2.0 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP TPR_19 PF14559.6 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 0.0041 17.6 0.8 0.0041 17.6 0.8 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF3322 PF11795.8 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 0.0046 17.0 5.2 0.14 12.1 0.6 2.2 1 1 0 2 2 2 2 Uncharacterized protein conserved in bacteria N-term (DUF3322) TPR_7 PF13176.6 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 0.099 12.7 0.1 1.9 8.7 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat COX5A PF02284.16 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 0.12 12.4 0.1 2.4 8.2 0.0 2.4 2 1 0 2 2 2 0 Cytochrome c oxidase subunit Va PPR_3 PF13812.6 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 0.15 12.1 0.0 3 8.0 0.0 2.2 2 0 0 2 2 2 0 Pentatricopeptide repeat domain HEAT_2 PF13646.6 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 0.17 12.3 3.3 0.58 10.6 2.3 2.2 1 1 2 3 3 3 0 HEAT repeats ANAPC3 PF12895.7 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 0.18 12.0 3.7 0.18 12.0 1.0 2.3 2 1 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 1 10.1 3.2 11 6.9 0.9 3.3 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_38857_length_541_cov_69.916996_g31501_i0reverse_frame_1 - 5.4 8.1 9.1 0.64 11.0 0.8 3.3 2 2 1 3 3 3 0 Tetratricopeptide repeat TBK1_CCD1 PF18394.1 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.0052 16.4 0.6 0.0071 15.9 0.6 1.2 1 0 0 1 1 1 1 TANK-binding kinase 1 coiled-coil domain 1 YkyA PF10368.9 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.012 15.3 5.7 0.017 14.8 5.7 1.2 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein THOC7 PF05615.13 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.014 15.6 6.1 0.019 15.2 6.1 1.3 1 0 0 1 1 1 0 Tho complex subunit 7 Kinesin PF00225.23 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.029 13.3 0.9 0.4 9.6 0.4 2.3 1 1 0 1 1 1 0 Kinesin motor domain UPF0242 PF06785.11 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.056 13.5 5.3 0.08 13.0 5.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMF_TATA_bd PF12325.8 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.081 13.1 12.0 0.42 10.9 3.2 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding SseB_C PF14581.6 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.082 13.0 1.6 1.2 9.3 0.3 2.7 2 1 1 3 3 3 0 SseB protein C-terminal domain BRI3BP PF14965.6 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.12 11.9 0.9 1.1 8.8 0.8 2.1 1 1 1 2 2 2 0 Negative regulator of p53/TP53 DUF1664 PF07889.12 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.13 12.3 2.4 0.2 11.7 2.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) ZapB PF06005.12 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.22 12.0 10.1 5.1 7.6 9.6 2.5 1 1 0 1 1 1 0 Cell division protein ZapB Spc7 PF08317.11 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.25 10.2 9.2 0.32 9.9 9.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein LPP PF04728.13 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.35 11.3 3.3 0.86 10.0 2.1 2.2 1 1 1 2 2 2 0 Lipoprotein leucine-zipper HalX PF08663.10 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.4 11.0 16.2 0.28 11.5 4.1 2.9 1 1 1 2 2 2 0 HalX domain DUF3138 PF11336.8 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 0.5 8.9 1.6 0.58 8.7 1.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3138) ABC_tran_CTD PF16326.5 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 1.1 9.5 12.6 0.91 9.8 10.3 2.0 1 1 1 2 2 2 0 ABC transporter C-terminal domain Seryl_tRNA_N PF02403.22 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 1.5 9.1 7.4 2.7 8.3 7.4 1.4 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Viral_P18 PF04521.13 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 1.8 8.3 4.9 4.4 7.1 1.1 2.3 1 1 1 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein TSC22 PF01166.18 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 2 8.8 6.6 1.7 9.0 1.4 2.4 1 1 1 2 2 2 0 TSC-22/dip/bun family SlyX PF04102.12 NODE_38850_length_541_cov_116.920949_g31494_i0forward_frame_1 - 3 8.5 9.9 11 6.7 1.4 2.9 2 1 1 3 3 3 0 SlyX RCC1_2 PF13540.6 NODE_38848_length_541_cov_143.960474_g31492_i0forward_frame_1 - 8.6e-09 35.0 9.3 0.16 11.8 0.0 4.5 4 1 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_38848_length_541_cov_143.960474_g31492_i0forward_frame_1 - 0.00023 21.3 0.3 8.7 6.4 0.1 3.8 3 1 0 3 3 3 2 Uncharacterised ACR, YagE family COG1723 SspK PF08176.12 NODE_38848_length_541_cov_143.960474_g31492_i0forward_frame_1 - 0.0062 16.8 0.0 33 4.8 0.0 3.6 4 0 0 4 4 4 1 Small acid-soluble spore protein K family GLTP PF08718.11 NODE_38848_length_541_cov_143.960474_g31492_i0forward_frame_1 - 0.092 13.0 0.0 2.1 8.6 0.0 2.2 1 1 0 1 1 1 0 Glycolipid transfer protein (GLTP) Mago-bind PF09282.10 NODE_38848_length_541_cov_143.960474_g31492_i0forward_frame_1 - 0.26 11.2 0.6 1.3e+02 2.6 0.0 3.6 4 0 0 4 4 4 0 Mago binding ART PF01129.18 NODE_38815_length_542_cov_80.347140_g31460_i0reverse_frame_1 - 0.12 11.6 0.1 0.17 11.2 0.1 1.1 1 0 0 1 1 1 0 NAD:arginine ADP-ribosyltransferase mTERF PF02536.14 NODE_38815_length_542_cov_80.347140_g31460_i0forward_frame_1 - 9.7e-25 87.1 0.0 1.4e-24 86.6 0.0 1.3 1 1 0 1 1 1 1 mTERF DUF4743 PF15916.5 NODE_38815_length_542_cov_80.347140_g31460_i0forward_frame_1 - 0.016 15.2 0.0 5.1 7.1 0.0 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4743) HTH_3 PF01381.22 NODE_38815_length_542_cov_80.347140_g31460_i0forward_frame_1 - 0.036 14.1 0.1 21 5.2 0.0 3.6 3 0 0 3 3 3 0 Helix-turn-helix PORR PF11955.8 NODE_38815_length_542_cov_80.347140_g31460_i0forward_frame_1 - 0.057 12.4 0.0 2.1 7.2 0.0 2.1 1 1 1 2 2 2 0 Plant organelle RNA recognition domain HTH_23 PF13384.6 NODE_38815_length_542_cov_80.347140_g31460_i0forward_frame_1 - 0.062 13.1 0.1 24 4.9 0.0 2.9 3 0 0 3 3 3 0 Homeodomain-like domain Cyclin PF08613.11 NODE_38802_length_542_cov_120.668639_g31447_i0reverse_frame_1 - 0.052 13.9 1.1 0.079 13.3 1.1 1.3 1 0 0 1 1 1 0 Cyclin AbiJ_NTD5 PF18865.1 NODE_38799_length_542_cov_155.613412_g31444_i0reverse_frame_1 - 0.0027 17.5 0.0 0.75 9.6 0.0 2.2 2 0 0 2 2 2 2 AbiJ N-terminal domain 5 zf-MIZ PF02891.20 NODE_38799_length_542_cov_155.613412_g31444_i0reverse_frame_1 - 0.01 15.6 7.5 0.014 15.1 0.5 3.1 3 0 0 3 3 3 0 MIZ/SP-RING zinc finger CwfJ_C_2 PF04676.14 NODE_38799_length_542_cov_155.613412_g31444_i0reverse_frame_1 - 0.045 14.6 0.1 20 6.1 0.0 2.5 2 0 0 2 2 2 0 Protein similar to CwfJ C-terminus 2 Sua5_yciO_yrdC PF01300.18 NODE_38799_length_542_cov_155.613412_g31444_i0reverse_frame_1 - 0.086 12.3 0.0 0.34 10.4 0.0 2.0 1 1 1 2 2 2 0 Telomere recombination WYL_2 PF10902.8 NODE_38799_length_542_cov_155.613412_g31444_i0forward_frame_1 - 0.11 12.8 1.0 19 5.7 0.1 2.4 2 0 0 2 2 2 0 WYL_2, Sm-like SH3 beta-barrel fold Nrf1_activ_bdg PF10492.9 NODE_38798_length_542_cov_181.404339_g31443_i0forward_frame_1 - 0.15 12.7 0.2 2.3 8.9 0.0 2.5 1 1 1 2 2 2 0 Nrf1 activator activation site binding domain Cyt-b5 PF00173.28 NODE_38782_length_542_cov_64769.015779_g31429_i0forward_frame_1 - 2.1e-07 31.0 0.3 2.8e-07 30.6 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 NODE_38782_length_542_cov_64769.015779_g31429_i0forward_frame_1 - 0.2 12.2 1.4 0.67 10.5 0.3 2.2 2 1 0 2 2 2 0 Pet100 UNC119_bdg PF15435.6 NODE_38775_length_543_cov_3.486220_g31422_i0reverse_frame_1 - 0.86 9.1 6.9 1.2 8.7 6.2 1.7 1 1 0 1 1 1 0 UNC119-binding protein C5orf30 homologue cEGF PF12662.7 NODE_38775_length_543_cov_3.486220_g31422_i0forward_frame_1 - 0.052 13.5 0.6 0.11 12.4 0.6 1.5 1 0 0 1 1 1 0 Complement Clr-like EGF-like PhageMin_Tail PF10145.9 NODE_38770_length_543_cov_3.781496_g31417_i0reverse_frame_1 - 0.00066 19.6 0.9 0.00097 19.1 0.9 1.2 1 0 0 1 1 1 1 Phage-related minor tail protein Ribosomal_L22e PF01776.17 NODE_38755_length_543_cov_148.964567_g31402_i0reverse_frame_1 - 4.2e-46 155.8 0.9 6e-46 155.3 0.9 1.2 1 0 0 1 1 1 1 Ribosomal L22e protein family PQQ_2 PF13360.6 NODE_38753_length_543_cov_168.206693_g31400_i0reverse_frame_1 - 0.11 12.1 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 PQQ-like domain DUF5122 PF17164.4 NODE_38753_length_543_cov_168.206693_g31400_i0reverse_frame_1 - 0.11 12.8 0.1 23 5.4 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5122) beta-propeller DUF872 PF05915.12 NODE_38753_length_543_cov_168.206693_g31400_i0forward_frame_1 - 0.11 12.7 0.6 6.4 7.0 0.1 2.1 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF872) Acyl_transf_3 PF01757.22 NODE_38736_length_544_cov_2.510806_g31384_i0reverse_frame_3 - 1.2e-16 60.8 7.1 1.5e-16 60.4 7.1 1.1 1 0 0 1 1 1 1 Acyltransferase family DUF2189 PF09955.9 NODE_38734_length_544_cov_3.017682_g31382_i0reverse_frame_3 - 0.13 12.5 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2189) EGF_3 PF12947.7 NODE_38732_length_544_cov_3.711198_g31380_i0forward_frame_2 - 0.4 10.9 3.2 0.76 10.0 0.4 2.3 2 0 0 2 2 2 0 EGF domain SPT16 PF08644.11 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_3 - 6.8 6.9 12.4 12 6.1 12.0 1.6 1 1 1 2 2 2 0 FACT complex subunit (SPT16/CDC68) AAA_23 PF13476.6 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.00039 21.0 11.8 0.00044 20.8 11.8 1.1 1 0 0 1 1 1 1 AAA domain zf-C2H2_jaz PF12171.8 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.0053 17.0 0.5 0.0053 17.0 0.5 1.8 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.021 15.2 0.3 0.052 13.9 0.3 1.7 1 0 0 1 1 1 0 Zinc-finger of C2H2 type Vps39_2 PF10367.9 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.029 14.8 4.2 0.029 14.8 4.2 1.6 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 AMP-binding_C_2 PF14535.6 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.052 13.9 3.3 0.094 13.0 3.3 1.4 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain DUF4407 PF14362.6 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.11 11.8 6.0 0.13 11.6 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) RNA_polI_A14 PF08203.11 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.12 13.1 1.7 0.22 12.3 1.4 1.6 1 1 0 1 1 1 0 Yeast RNA polymerase I subunit RPA14 DUF1343 PF07075.11 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.36 10.1 4.7 0.45 9.8 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1343) ThiS PF02597.20 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 0.8 10.4 3.9 75 4.1 3.9 2.4 1 1 0 1 1 1 0 ThiS family AAA_11 PF13086.6 NODE_38721_length_544_cov_70.322200_g31369_i0reverse_frame_2 - 1.4 8.7 14.5 2.2 8.0 14.5 1.3 1 1 0 1 1 1 0 AAA domain Antistasin PF02822.14 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.00012 22.7 0.4 0.019 15.6 0.1 2.3 2 0 0 2 2 2 1 Antistasin family DUF4215 PF13948.6 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.018 15.4 0.0 9.3 6.8 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4215) cEGF PF12662.7 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.027 14.4 1.9 3.3 7.7 0.0 2.3 2 0 0 2 2 2 0 Complement Clr-like EGF-like EGF_CA PF07645.15 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.18 12.0 1.8 5.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Calcium-binding EGF domain FXa_inhibition PF14670.6 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.45 10.8 1.4 26 5.2 0.1 2.2 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site PsbH PF00737.20 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 0.9 9.3 0.1 0.9 9.3 0.1 2.9 3 0 0 3 3 3 0 Photosystem II 10 kDa phosphoprotein AGTRAP PF06396.11 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_3 - 1.1 9.0 10.4 1.5 8.6 10.4 1.3 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) Flu_M2 PF00599.17 NODE_38712_length_544_cov_107.970530_g31361_i0reverse_frame_2 - 0.037 14.1 1.5 0.077 13.1 1.5 1.5 1 0 0 1 1 1 0 Influenza Matrix protein (M2) Peptidase_A22B PF04258.13 NODE_38706_length_544_cov_131.703340_g31355_i0reverse_frame_3 - 0.039 13.5 12.5 0.046 13.2 12.5 1.2 1 0 0 1 1 1 0 Signal peptide peptidase Tcf25 PF04910.14 NODE_38704_length_544_cov_131.744597_g31353_i0reverse_frame_2 - 0.045 12.8 3.2 0.058 12.5 3.2 1.1 1 0 0 1 1 1 0 Transcriptional repressor TCF25 Neur_chan_memb PF02932.16 NODE_38686_length_544_cov_1344.919450_g31336_i0forward_frame_3 - 0.055 13.5 4.8 0.067 13.2 4.8 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3715 PF12509.8 NODE_38685_length_544_cov_3036.041257_g31335_i0forward_frame_2 - 0.024 14.7 0.1 0.035 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3715) DUF2723 PF11028.8 NODE_38681_length_545_cov_1.774510_g31333_i0forward_frame_2 - 0.27 11.1 7.1 0.36 10.7 7.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) HPS3_Mid PF14762.6 NODE_38679_length_545_cov_2.354902_g31331_i0reverse_frame_2 - 0.026 13.3 1.6 1 8.0 0.1 2.1 2 0 0 2 2 2 0 Hermansky-Pudlak syndrome 3, middle region EphA2_TM PF14575.6 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.0073 17.2 1.1 3.3 8.6 1.6 2.3 2 0 0 2 2 2 2 Ephrin type-A receptor 2 transmembrane domain TMEM51 PF15345.6 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.045 13.6 1.1 0.058 13.2 1.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 51 DUF898 PF05987.13 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.068 12.2 1.8 0.092 11.8 1.8 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) Amnionless PF14828.6 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.11 11.3 0.5 0.15 10.9 0.5 1.2 1 0 0 1 1 1 0 Amnionless SSP160 PF06933.11 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.13 10.4 7.0 0.18 10.0 7.0 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF2207 PF09972.9 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.18 10.5 0.0 0.21 10.3 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3446 PF11928.8 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 0.48 10.8 13.3 0.1 12.9 9.6 1.7 2 0 0 2 2 2 0 Early growth response N-terminal domain DUF2749 PF10907.8 NODE_38674_length_545_cov_3.762745_g31326_i0reverse_frame_2 - 8.6 6.6 6.8 22 5.3 6.8 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) BatD PF13584.6 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 0.015 14.2 0.1 0.02 13.7 0.1 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF3446 PF11928.8 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 0.04 14.2 12.5 0.041 14.2 4.9 2.2 2 0 0 2 2 2 0 Early growth response N-terminal domain IMUP PF15761.5 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 0.15 12.8 7.8 0.24 12.1 7.8 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein Mucin PF01456.17 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 0.19 11.7 21.9 0.23 11.5 21.9 1.4 1 1 0 1 1 1 0 Mucin-like glycoprotein DUF4834 PF16118.5 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 0.94 10.5 4.4 1 10.3 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) SR-25 PF10500.9 NODE_38674_length_545_cov_3.762745_g31326_i0forward_frame_3 - 3.5 7.2 15.6 6.3 6.3 15.6 1.3 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein MyTH4 PF00784.17 NODE_38671_length_545_cov_40.123529_g31323_i0reverse_frame_3 - 0.011 16.3 7.0 0.29 11.7 0.3 3.2 2 1 1 3 3 3 0 MyTH4 domain HTH_15 PF12324.8 NODE_38671_length_545_cov_40.123529_g31323_i0reverse_frame_2 - 0.0054 16.6 0.0 0.88 9.6 0.0 3.1 3 0 0 3 3 3 1 Helix-turn-helix domain of alkylmercury lyase Melittin PF01372.17 NODE_38671_length_545_cov_40.123529_g31323_i0forward_frame_3 - 1.7 8.8 6.3 20 5.4 0.1 4.2 4 0 0 4 4 4 0 Melittin TMEM100 PF16311.5 NODE_38671_length_545_cov_40.123529_g31323_i0forward_frame_3 - 2.5 7.7 9.7 22 4.6 0.1 3.4 3 1 0 3 3 3 0 Transmembrane protein 100 RCC1_2 PF13540.6 NODE_38671_length_545_cov_40.123529_g31323_i0forward_frame_2 - 0.0016 18.1 1.8 4.9 7.1 0.1 3.2 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DDE_Tnp_1_3 PF13612.6 NODE_38671_length_545_cov_40.123529_g31323_i0forward_frame_2 - 0.013 15.5 0.2 15 5.6 0.0 3.0 3 0 0 3 3 3 0 Transposase DDE domain DUF1459 PF07312.11 NODE_38668_length_545_cov_56.778431_g31320_i0reverse_frame_3 - 0.18 12.0 2.7 0.22 11.7 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1459) CEP76-C2 PF15627.6 NODE_38668_length_545_cov_56.778431_g31320_i0reverse_frame_2 - 2.5e-11 43.4 0.0 4.4e-11 42.6 0.0 1.4 1 0 0 1 1 1 1 CEP76 C2 domain Dsl1_N PF11988.8 NODE_38668_length_545_cov_56.778431_g31320_i0reverse_frame_2 - 0.026 13.5 3.9 0.037 13.0 3.9 1.1 1 0 0 1 1 1 0 Retrograde transport protein Dsl1 N terminal Lon_2 PF13337.6 NODE_38668_length_545_cov_56.778431_g31320_i0reverse_frame_2 - 0.13 10.8 2.3 0.16 10.5 2.3 1.1 1 0 0 1 1 1 0 Putative ATP-dependent Lon protease RabGAP-TBC PF00566.18 NODE_38668_length_545_cov_56.778431_g31320_i0reverse_frame_2 - 0.61 9.7 2.9 0.85 9.2 2.9 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain 7tm_1 PF00001.21 NODE_38646_length_545_cov_172.737255_g31299_i0reverse_frame_3 - 4 6.7 8.4 5.2 6.3 8.4 1.4 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) RGCC PF15151.6 NODE_38646_length_545_cov_172.737255_g31299_i0reverse_frame_2 - 0.05 13.8 4.6 0.087 13.1 4.6 1.4 1 0 0 1 1 1 0 Response gene to complement 32 protein family DUF5520 PF17658.1 NODE_38646_length_545_cov_172.737255_g31299_i0reverse_frame_2 - 4.7 6.2 11.9 1.5 7.9 1.2 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5520) Cys_knot PF00007.22 NODE_38636_length_545_cov_2073.013725_g31290_i0forward_frame_3 - 0.12 12.6 9.5 0.2 12.0 9.5 1.4 1 0 0 1 1 1 0 Cystine-knot domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks133.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks133.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks133.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks133.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Metallothi_Euk2 PF12809.7 NODE_38629_length_546_cov_2.637965_g31283_i0reverse_frame_2 - 0.97 9.8 15.6 2 8.8 15.6 1.5 1 0 0 1 1 1 0 Eukaryotic metallothionein DUF2207 PF09972.9 NODE_38623_length_546_cov_61.358121_g31277_i0reverse_frame_3 - 1.1 7.9 2.9 1.3 7.7 2.9 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PhyH PF05721.13 NODE_38616_length_546_cov_98.866928_g31272_i0forward_frame_2 - 3.1e-13 50.5 0.0 4.7e-13 49.9 0.0 1.3 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Dpy-30 PF05186.13 NODE_38602_length_546_cov_173.790607_g31259_i0reverse_frame_3 - 0.099 12.4 0.6 0.28 10.9 0.6 1.7 1 0 0 1 1 1 0 Dpy-30 motif Asp PF00026.23 NODE_38601_length_546_cov_174.964775_g31258_i0forward_frame_3 - 9.7e-09 35.1 0.1 1.1e-08 34.9 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Peptidase_S80 PF07230.11 NODE_38601_length_546_cov_174.964775_g31258_i0forward_frame_3 - 0.036 12.4 0.0 0.055 11.8 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage T4-like capsid assembly protein (Gp20) TAXi_C PF14541.6 NODE_38601_length_546_cov_174.964775_g31258_i0forward_frame_3 - 0.071 12.9 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal TFIIS_C PF01096.18 NODE_38596_length_546_cov_333.481409_g31253_i0reverse_frame_2 - 2.8e-05 23.9 8.3 0.00013 21.7 8.3 2.1 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) TFIIS_M PF07500.14 NODE_38596_length_546_cov_333.481409_g31253_i0reverse_frame_2 - 7.2e-05 23.2 0.1 0.0001 22.7 0.1 1.2 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain Transformer PF06495.11 ORF96955 - 8.9 6.4 11.1 12 5.9 11.1 1.2 1 0 0 1 1 1 0 Fruit fly transformer protein Ribosomal_L40e PF01020.17 ORF96856 - 7.5 6.5 11.7 0.23 11.4 3.6 2.5 2 0 0 2 2 2 0 Ribosomal L40e family EutN_CcmL PF03319.13 ORF95331 - 7.2e-29 100.2 0.4 1e-28 99.7 0.4 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutN/carboxysome Hexapep PF00132.24 ORF92717 - 5.1e-09 35.5 14.0 1.1e-07 31.3 4.0 3.1 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF92717 - 2.8e-05 23.8 6.9 2.8e-05 23.8 6.9 2.7 2 1 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase DUF4191 PF13829.6 ORF90061 - 0.15 11.4 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Cpta_toxin PF07254.12 ORF8678 - 7.8e-56 187.6 11.7 1.1e-55 187.1 11.7 1.2 1 0 0 1 1 1 1 Membrane-bound toxin component of toxin-antitoxin system zf-C3H2C3 PF17122.5 ORF82984 - 0.045 13.8 2.2 0.16 12.0 2.2 1.9 1 0 0 1 1 1 0 Zinc-finger EF-hand_7 PF13499.6 ORF82063 - 0.052 14.0 1.7 0.096 13.2 0.8 1.8 2 0 0 2 2 2 0 EF-hand domain pair NAPRTase_C PF17956.1 ORF82063 - 0.08 13.4 0.8 3.3 8.2 0.1 2.4 2 0 0 2 2 2 0 Nicotinate phosphoribosyltransferase C-terminal domain tRNA_NucTran2_2 PF13735.6 ORF82063 - 0.086 12.8 3.7 0.12 12.3 3.7 1.3 1 0 0 1 1 1 0 tRNA nucleotidyltransferase domain 2 putative HMMR_N PF15905.5 ORF82063 - 0.35 10.3 12.4 0.45 9.9 12.4 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal IF-2B PF01008.17 ORF82063 - 0.43 9.7 3.4 0.56 9.4 3.4 1.3 1 0 0 1 1 1 0 Initiation factor 2 subunit family Ribosomal_S20p PF01649.18 ORF82063 - 0.84 10.3 4.0 70 4.2 4.0 2.2 1 1 0 1 1 1 0 Ribosomal protein S20 XkdW PF09636.10 ORF82063 - 2.3 8.4 5.8 2.5 8.2 0.7 2.7 1 1 0 2 2 2 0 XkdW protein GLTP PF08718.11 ORF82063 - 2.4 8.4 4.7 5.1 7.4 0.8 2.1 1 1 1 2 2 2 0 Glycolipid transfer protein (GLTP) PK_C PF02887.16 ORF79482 - 0.069 13.4 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain Arf PF00025.21 ORF78674 - 2.5e-78 261.5 0.3 2.9e-78 261.3 0.3 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF78674 - 2.4e-14 53.6 0.0 3.4e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF78674 - 1.4e-13 50.7 0.0 1.7e-13 50.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF78674 - 2.7e-13 49.8 0.0 3.3e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF78674 - 6.5e-12 45.3 0.4 9.5e-08 31.6 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF78674 - 2.8e-10 40.0 0.0 3.6e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF78674 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF78674 - 0.0098 15.2 0.1 0.018 14.3 0.1 1.4 1 0 0 1 1 1 1 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF78674 - 0.017 15.3 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain Methyltransf_3 PF01596.17 ORF77765 - 2.8e-64 216.2 0.1 3.1e-64 216.1 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF77765 - 1.2e-12 48.8 0.0 1.7e-12 48.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF77765 - 8.3e-07 28.9 0.0 1.1e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF77765 - 0.00024 21.7 0.0 0.00037 21.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF77765 - 0.0019 18.0 0.0 0.0025 17.6 0.0 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 ORF77765 - 0.042 13.2 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF77765 - 0.043 13.8 0.0 0.17 11.8 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain CMAS PF02353.20 ORF77765 - 0.075 12.3 0.0 0.094 12.0 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 ORF77765 - 0.1 13.2 0.0 0.25 12.0 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain SIN1_PH PF16979.5 ORF77183 - 3.4e-10 40.2 2.7 5.1e-10 39.6 2.7 1.3 1 0 0 1 1 1 1 SAPK-interacting protein 1 (Sin1), Pleckstrin-homology CX PF01705.19 ORF77183 - 0.057 14.0 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 CX module Nrap PF03813.14 ORF7706 - 0.018 15.1 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Nrap protein domain 1 CybS PF05328.12 ORF74767 - 0.14 11.9 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit Claudin_2 PF13903.6 ORF74571 - 0.9 9.3 3.5 2.1 8.1 3.5 1.8 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction GrpE PF01025.19 ORF71128 - 0.036 13.7 1.1 0.072 12.7 1.1 1.5 1 0 0 1 1 1 0 GrpE Arf PF00025.21 ORF6430 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF6430 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF6430 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF6430 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF6430 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF6430 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF6430 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF6430 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase PTB PF08416.13 ORF6383 - 0.22 11.7 0.9 0.34 11.1 0.1 1.7 2 0 0 2 2 2 0 Phosphotyrosine-binding domain DUF1445 PF07286.12 ORF63587 - 7.4e-63 210.8 0.0 8.6e-63 210.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1445) FAM76 PF16046.5 ORF63574 - 0.016 14.6 17.5 0.17 11.2 5.1 2.0 1 1 1 2 2 2 0 FAM76 protein DUF3584 PF12128.8 ORF63574 - 0.016 12.8 18.4 0.054 11.0 18.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) ApoO PF09769.9 ORF63574 - 0.084 12.8 3.7 1.6 8.7 0.3 2.3 2 0 0 2 2 2 0 Apolipoprotein O TPR_MLP1_2 PF07926.12 ORF63574 - 0.18 11.9 23.9 2.9 8.0 3.4 3.0 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein EAP30 PF04157.16 ORF63574 - 0.23 10.7 8.3 0.32 10.2 6.5 2.0 1 1 1 2 2 2 0 EAP30/Vps36 family DUF745 PF05335.13 ORF63574 - 0.35 10.6 7.7 0.12 12.1 4.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF745) DUF4407 PF14362.6 ORF63574 - 0.42 9.9 11.3 0.21 10.9 3.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) DUF1664 PF07889.12 ORF63574 - 0.56 10.3 10.3 1.1 9.2 1.3 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) TryThrA_C PF12319.8 ORF63574 - 0.56 9.6 11.5 0.43 10.0 1.7 2.2 2 0 0 2 2 2 0 Tryptophan-Threonine-rich plasmodium antigen C terminal Syntaxin-6_N PF09177.11 ORF63574 - 1.2 9.8 11.2 1.6 9.4 6.1 3.0 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Exonuc_VII_L PF02601.15 ORF63574 - 1.4 8.4 10.9 1.8 8.1 10.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Golgin_A5 PF09787.9 ORF63574 - 1.7 8.0 23.1 2.5 7.5 14.5 2.0 1 1 1 2 2 2 0 Golgin subfamily A member 5 Lectin_N PF03954.14 ORF63574 - 2.5 7.9 8.7 11 5.7 4.5 3.0 1 1 0 2 2 2 0 Hepatic lectin, N-terminal domain Myticin-prepro PF10690.9 ORF6302 - 2.8 8.2 5.3 5.4 7.3 5.3 1.4 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Arf PF00025.21 ORF62959 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF62959 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF62959 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF62959 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF62959 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF62959 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF62959 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF62959 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase Arf PF00025.21 ORF62658 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF62658 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF62658 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF62658 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF62658 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF62658 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF62658 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF62658 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase Ras PF00071.22 ORF61753 - 0.014 15.0 0.1 0.055 13.1 0.1 2.0 1 1 0 1 1 1 0 Ras family zf-C2H2_assoc PF16606.5 ORF60951 - 3.2 8.0 9.5 11 6.3 4.3 2.2 2 0 0 2 2 2 0 Unstructured conserved, between two C2H2-type zinc-fingers Pet100 PF09803.9 ORF57761 - 1.4 9.5 5.2 2.9 8.5 0.6 2.4 2 0 0 2 2 2 0 Pet100 Apolipoprotein PF01442.18 ORF57638 - 0.0084 16.0 2.1 0.013 15.4 2.1 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain TPR_MLP1_2 PF07926.12 ORF57638 - 0.014 15.4 0.5 0.024 14.7 0.5 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein TolA_bind_tri PF16331.5 ORF57638 - 0.021 14.9 1.2 0.04 14.0 1.2 1.5 1 0 0 1 1 1 0 TolA binding protein trimerisation IKBKB_SDD PF18397.1 ORF57638 - 0.033 13.5 0.1 0.046 13.0 0.1 1.1 1 0 0 1 1 1 0 IQBAL scaffold dimerization domain COMP PF11598.8 ORF57638 - 0.034 14.6 2.6 3 8.4 0.0 2.2 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein HIP1_clath_bdg PF16515.5 ORF57638 - 0.11 13.2 2.7 0.22 12.2 2.6 1.5 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 PhaP_Bmeg PF09602.10 ORF57638 - 0.14 12.1 0.5 0.19 11.7 0.5 1.2 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) DUF418 PF04235.12 ORF5482 - 0.045 13.7 0.4 0.06 13.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF418) Nrap PF03813.14 ORF54806 - 0.018 15.1 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Nrap protein domain 1 GyrB_insert PF18053.1 ORF54666 - 0.077 12.9 13.1 0.34 10.8 1.7 2.0 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain Spike_NTD PF16451.5 ORF54666 - 0.081 12.3 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain Med10 PF09748.9 ORF54666 - 1.7 8.6 13.4 1.4 8.9 0.6 3.0 1 1 1 2 2 2 0 Transcription factor subunit Med10 of Mediator complex TMEM154 PF15102.6 ORF54406 - 0.0005 20.0 1.7 0.0005 20.0 1.7 1.5 1 1 0 1 1 1 1 TMEM154 protein family PMP1_2 PF08114.11 ORF54406 - 0.055 13.2 2.2 0.1 12.4 2.2 1.4 1 0 0 1 1 1 0 ATPase proteolipid family DUF4500 PF14937.6 ORF54406 - 0.071 13.1 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4500) Podoplanin PF05808.11 ORF54406 - 0.18 11.9 7.9 0.16 12.0 6.6 1.8 1 1 1 2 2 2 0 Podoplanin Claudin_2 PF13903.6 ORF54406 - 0.48 10.2 2.7 1.7 8.4 2.6 1.9 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF4834 PF16118.5 ORF54406 - 2.7 9.0 7.3 3.8 8.5 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4834) gpUL132 PF11359.8 ORF54406 - 5 6.6 9.5 0.15 11.6 3.6 1.5 2 0 0 2 2 2 0 Glycoprotein UL132 adh_short PF00106.25 ORF54124 - 4.1e-16 59.0 0.0 5.3e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF54124 - 7.2e-10 38.8 0.0 8.5e-10 38.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.10 ORF54124 - 0.0034 16.8 0.1 0.0043 16.5 0.1 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) PPR_2 PF13041.6 ORF52670 - 2.1e-09 37.4 0.0 0.00071 19.7 0.0 2.3 2 0 0 2 2 2 2 PPR repeat family PPR PF01535.20 ORF52670 - 5.8e-06 26.2 0.1 1.6 9.2 0.0 3.9 4 0 0 4 4 4 3 PPR repeat PPR_3 PF13812.6 ORF52670 - 0.014 15.4 0.0 0.41 10.8 0.0 2.7 1 1 2 3 3 3 0 Pentatricopeptide repeat domain Ras PF00071.22 ORF51411 - 3e-39 134.2 0.4 3.4e-39 134.0 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF51411 - 7.5e-22 77.8 0.1 1.2e-21 77.2 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF51411 - 1.6e-07 31.0 0.1 2e-07 30.6 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF51411 - 3.7e-07 30.2 0.1 4.8e-07 29.8 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Septin PF00735.18 ORF51411 - 0.00016 21.1 0.1 0.00023 20.5 0.1 1.2 1 0 0 1 1 1 1 Septin RsgA_GTPase PF03193.16 ORF51411 - 0.00053 19.9 0.2 0.017 15.0 0.1 2.6 1 1 2 3 3 3 1 RsgA GTPase Dynamin_N PF00350.23 ORF51411 - 0.0012 18.9 0.1 0.0018 18.4 0.1 1.4 1 1 0 1 1 1 1 Dynamin family FeoB_N PF02421.18 ORF51411 - 0.0057 16.2 0.1 0.039 13.5 0.2 2.2 2 1 0 2 2 2 1 Ferrous iron transport protein B AIG1 PF04548.16 ORF51411 - 0.015 14.6 0.0 0.02 14.2 0.0 1.3 1 0 0 1 1 1 0 AIG1 family PduV-EutP PF10662.9 ORF51411 - 0.019 14.7 0.1 0.026 14.3 0.1 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.6 ORF51411 - 0.019 15.3 0.0 0.028 14.8 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain SRPRB PF09439.10 ORF51411 - 0.022 14.2 0.0 0.031 13.7 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit ATPase_2 PF01637.18 ORF51411 - 0.022 14.7 0.1 0.035 14.0 0.1 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_14 PF13173.6 ORF51411 - 0.05 13.6 0.1 0.093 12.8 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF51411 - 0.054 13.0 0.2 0.14 11.6 0.1 1.7 1 1 0 1 1 1 0 P-loop containing dynein motor region GTP_EFTU PF00009.27 ORF51411 - 0.054 13.0 0.3 0.56 9.7 0.3 2.3 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain ATP-synt_ab PF00006.25 ORF51411 - 0.06 13.0 0.0 0.072 12.7 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_22 PF13401.6 ORF51411 - 0.074 13.3 0.0 0.16 12.2 0.0 1.7 1 1 0 1 1 1 0 AAA domain MCM PF00493.23 ORF51411 - 0.076 12.1 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AMH_N PF04709.12 ORF51411 - 0.094 11.6 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Anti-Mullerian hormone, N terminal region TniB PF05621.11 ORF51411 - 0.12 11.7 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein DUF4056 PF13265.6 ORF50451 - 0.068 12.5 0.0 0.23 10.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4056) SKI PF01202.22 ORF49613 - 6.6e-48 162.8 0.0 7.7e-48 162.6 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase AAA_18 PF13238.6 ORF49613 - 1.3e-07 32.2 0.0 2.1e-07 31.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 ORF49613 - 3.9e-06 27.3 0.0 0.0002 21.8 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF49613 - 9.9e-06 26.0 0.1 4.8e-05 23.8 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF49613 - 0.00015 22.0 0.1 0.00075 19.7 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF49613 - 0.00015 21.8 0.0 0.00037 20.5 0.0 1.7 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF49613 - 0.0019 18.5 0.0 0.011 16.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 ORF49613 - 0.0019 18.2 0.0 0.01 15.8 0.0 1.9 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 ORF49613 - 0.0026 17.5 0.0 0.71 9.5 0.0 2.2 2 0 0 2 2 2 1 Thymidylate kinase AAA_25 PF13481.6 ORF49613 - 0.0034 17.0 0.2 0.01 15.5 0.2 1.7 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 ORF49613 - 0.0039 17.3 0.0 0.06 13.5 0.0 2.1 1 1 1 2 2 2 1 Cytidylate kinase-like family RNA_helicase PF00910.22 ORF49613 - 0.0049 17.2 0.0 0.013 15.9 0.0 1.7 2 0 0 2 2 2 1 RNA helicase Cytidylate_kin PF02224.18 ORF49613 - 0.0054 16.5 0.0 0.036 13.8 0.0 2.0 2 0 0 2 2 2 1 Cytidylate kinase TFIIA_gamma_N PF02268.16 ORF49613 - 0.042 13.9 0.1 0.16 12.0 0.1 2.0 2 0 0 2 2 2 0 Transcription initiation factor IIA, gamma subunit, helical domain NACHT PF05729.12 ORF49613 - 0.043 13.7 0.0 0.47 10.3 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA_19 PF13245.6 ORF49613 - 0.045 14.1 0.0 0.079 13.3 0.0 1.5 1 1 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 ORF49613 - 0.073 13.2 0.0 0.19 11.8 0.0 1.8 2 0 0 2 2 1 0 Sigma-54 interaction domain Rad17 PF03215.15 ORF49613 - 0.082 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_7 PF12775.7 ORF49613 - 0.1 12.1 0.0 0.24 10.9 0.0 1.7 1 1 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF49613 - 0.18 12.3 0.0 0.36 11.3 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_24 PF13479.6 ORF49613 - 0.21 11.3 0.0 0.22 11.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain PS-DH PF14765.6 ORF46686 - 1.4e-14 54.0 0.4 1.9e-14 53.6 0.4 1.0 1 0 0 1 1 1 1 Polyketide synthase dehydratase Na_sulph_symp PF00939.19 ORF46552 - 5.7e-24 85.0 14.5 6.4e-24 84.8 14.5 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region SF-assemblin PF06705.11 ORF45772 - 1.6e-05 24.4 11.4 4.5e-05 22.9 11.4 2.1 1 1 0 1 1 1 1 SF-assemblin/beta giardin BBP1_C PF15272.6 ORF45772 - 0.056 13.3 8.6 0.15 11.9 8.6 1.7 1 1 0 1 1 1 0 Spindle pole body component BBP1, C-terminal DUF29 PF01724.16 ORF45772 - 0.078 13.2 7.6 0.035 14.3 2.9 2.0 1 1 0 2 2 2 0 Domain of unknown function DUF29 FUSC PF04632.12 ORF45772 - 5 5.5 7.7 6 5.3 7.7 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family FYVE_2 PF02318.16 ORF45772 - 8.5 6.6 14.2 0.4 10.9 3.2 2.7 1 1 2 3 3 3 0 FYVE-type zinc finger ABC_tran PF00005.27 ORF45570 - 7.9e-10 39.4 0.1 1.9e-09 38.2 0.0 1.6 2 1 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF45570 - 9.4e-08 32.2 0.0 1.6e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 ORF45570 - 0.0013 19.4 0.2 0.0044 17.7 0.1 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4162) RNA_pol_Rpb1_1 PF04997.12 ORF45570 - 0.059 12.7 0.0 0.062 12.6 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 1 Pre-PUA PF17832.1 ORF44875 - 1.9e-19 70.1 0.5 2.6e-19 69.7 0.5 1.2 1 0 0 1 1 1 1 Pre-PUA-like domain PUA PF01472.20 ORF44875 - 4.5e-14 52.2 2.0 6.8e-14 51.6 2.0 1.3 1 0 0 1 1 1 1 PUA domain DUF1947 PF09183.10 ORF44875 - 0.0022 18.3 0.1 0.0045 17.2 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) ADIP PF11559.8 ORF43985 - 0.0012 19.0 8.5 0.0018 18.4 8.1 1.5 1 1 0 1 1 1 1 Afadin- and alpha -actinin-Binding DASH_Spc34 PF08657.10 ORF43985 - 0.014 15.2 12.1 0.012 15.4 10.6 1.6 1 1 0 1 1 1 0 DASH complex subunit Spc34 Yuri_gagarin PF15934.5 ORF43985 - 0.026 14.4 11.2 0.034 14.0 11.2 1.2 1 0 0 1 1 1 0 Yuri gagarin KASH_CCD PF14662.6 ORF43985 - 0.14 12.0 17.5 0.16 11.8 16.1 1.7 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF1542 PF07564.11 ORF43985 - 0.2 11.8 3.6 0.35 11.0 3.1 1.7 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1542) HigB-like_toxin PF05015.13 ORF43985 - 0.58 10.6 7.9 0.73 10.3 3.8 2.6 1 1 0 2 2 2 0 RelE-like toxin of type II toxin-antitoxin system HigB Cnn_1N PF07989.11 ORF43985 - 1.6 8.9 14.0 0.13 12.5 3.8 2.8 1 1 2 3 3 3 0 Centrosomin N-terminal motif 1 Csm1_N PF18504.1 ORF43985 - 1.8 9.0 15.2 3.5 8.0 4.0 3.4 1 1 2 3 3 3 0 Csm1 N-terminal domain DUF4407 PF14362.6 ORF43985 - 2.8 7.2 8.4 60 2.8 9.0 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FlaC_arch PF05377.11 ORF43985 - 3.1 8.2 12.4 1.8 9.0 2.8 2.8 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) bZIP_1 PF00170.21 ORF43985 - 7.6 6.7 13.2 13 6.0 2.6 3.3 2 1 1 3 3 3 0 bZIP transcription factor GyrB_insert PF18053.1 ORF43955 - 0.077 12.9 13.1 0.34 10.8 1.7 2.0 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain Spike_NTD PF16451.5 ORF43955 - 0.081 12.3 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain Med10 PF09748.9 ORF43955 - 1.7 8.6 13.4 1.4 8.9 0.6 3.0 1 1 1 2 2 2 0 Transcription factor subunit Med10 of Mediator complex RGS12_us1 PF16613.5 ORF4349 - 0.092 13.1 3.8 0.094 13.0 0.9 2.1 2 1 1 3 3 3 0 Unstructured region of RGS12 NDUF_B8 PF05821.11 ORF38786 - 0.0021 17.9 0.0 0.003 17.4 0.0 1.1 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) PBC PF03792.13 ORF35554 - 0.21 11.4 3.6 0.26 11.0 2.4 1.8 1 1 1 2 2 2 0 PBC domain Cytochrome_CBB3 PF13442.6 ORF3468 - 7.5e-06 26.2 1.0 1.1e-05 25.7 0.4 1.6 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF3468 - 0.00024 20.8 0.0 0.00037 20.2 0.0 1.3 1 0 0 1 1 1 1 Cytochrome c-550 domain Cytochrom_C PF00034.21 ORF3468 - 0.0075 17.4 0.8 0.012 16.8 0.8 1.3 1 0 0 1 1 1 1 Cytochrome c Cytochrome_C7 PF14522.6 ORF3468 - 0.079 13.0 1.2 0.13 12.3 1.2 1.3 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c DUF2613 PF11021.8 ORF3468 - 3.4 7.9 8.7 0.41 10.8 0.5 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) FixP_N PF14715.6 ORF3407 - 0.02 14.6 0.7 0.063 13.0 0.7 1.8 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP HPP PF04982.13 ORF3407 - 0.03 14.5 1.5 0.13 12.5 1.3 2.0 1 1 0 1 1 1 0 HPP family TrfA PF07042.11 ORF3407 - 0.19 10.7 0.1 0.28 10.2 0.1 1.2 1 0 0 1 1 1 0 TrfA protein NLRC4_HD PF17889.1 ORF34000 - 0.036 14.4 0.6 0.083 13.2 0.1 1.8 2 0 0 2 2 2 0 NLRC4 helical domain zf_C2H2_6 PF18450.1 ORF34000 - 0.047 13.4 1.8 0.047 13.4 1.8 2.1 2 0 0 2 2 2 0 Zinc Finger domain Arf PF00025.21 ORF32421 - 4e-78 260.8 0.2 4.6e-78 260.7 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF32421 - 1.8e-14 54.0 0.0 2.5e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF32421 - 1.4e-13 50.7 0.0 1.7e-13 50.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF32421 - 4.3e-13 49.2 0.0 4.9e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF32421 - 1.9e-11 43.7 0.4 2.5e-07 30.2 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF32421 - 3.9e-10 39.5 0.0 5.3e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF32421 - 1.3e-05 25.2 0.0 2.1e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF32421 - 0.011 15.0 0.1 0.02 14.2 0.1 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF32421 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF2554 PF10829.8 ORF31253 - 0.022 15.1 0.0 0.039 14.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2554) Oxidored-like PF09791.9 ORF3099 - 6.7 6.5 14.5 0.76 9.5 3.5 2.4 2 0 0 2 2 2 0 Oxidoreductase-like protein, N-terminal Arf PF00025.21 ORF27840 - 1.6e-77 258.9 0.2 1.8e-77 258.7 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF27840 - 2.1e-14 53.7 0.0 3e-14 53.3 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF27840 - 1.1e-13 51.0 0.0 1.3e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF27840 - 5.6e-13 48.8 0.0 6.4e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF27840 - 1.5e-11 44.1 0.3 2.2e-07 30.4 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF27840 - 1.6e-09 37.5 0.0 2.2e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF27840 - 3.2e-05 24.0 0.0 5e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF27840 - 0.011 15.0 0.0 0.02 14.2 0.0 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF27840 - 0.025 14.7 0.0 0.042 14.0 0.0 1.3 1 1 0 1 1 1 0 AAA domain Ribosomal_L24e PF01246.20 ORF26911 - 0.023 14.9 2.0 0.023 14.9 2.0 2.2 2 1 0 2 2 2 0 Ribosomal protein L24e Peptidase_S46 PF10459.9 ORF26911 - 0.12 11.0 8.8 0.13 10.9 8.8 1.0 1 0 0 1 1 1 0 Peptidase S46 Arf PF00025.21 ORF26026 - 1.8e-74 249.0 0.0 2.1e-74 248.8 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF26026 - 2.9e-15 56.5 0.1 3.9e-15 56.1 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF26026 - 1.3e-14 54.1 0.0 1.5e-14 53.8 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF26026 - 7.8e-13 48.3 1.2 8e-09 35.1 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 ORF26026 - 1.5e-12 47.4 0.0 1.8e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 ORF26026 - 1.6e-10 40.8 0.0 2e-10 40.5 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF26026 - 1.8e-06 28.0 0.1 2.6e-06 27.5 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF26026 - 0.0029 16.9 0.4 0.0072 15.7 0.1 1.6 1 1 1 2 2 2 1 6-phosphofructo-2-kinase cobW PF02492.19 ORF26026 - 0.15 11.6 0.1 1.4 8.5 0.0 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Pet100 PF09803.9 ORF25389 - 1.4 9.5 5.2 2.9 8.5 0.6 2.4 2 0 0 2 2 2 0 Pet100 HEAT_PBS PF03130.16 ORF24612 - 0.061 14.0 0.0 0.17 12.7 0.0 1.8 1 0 0 1 1 1 0 PBS lyase HEAT-like repeat TRP PF06011.12 ORF24504 - 2.5e-05 23.2 10.0 2.9e-05 23.0 10.0 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF2070 PF09843.9 ORF24504 - 0.76 8.0 10.3 0.96 7.7 10.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Vma12 PF11712.8 ORF24504 - 3.8 7.6 5.5 3.8 7.6 4.6 1.6 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase ROK PF00480.20 ORF24358 - 6.5 6.1 6.7 9.9 5.5 0.3 2.1 2 0 0 2 2 2 0 ROK family Arf PF00025.21 ORF24309 - 2e-78 261.8 0.3 2.3e-78 261.6 0.3 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF24309 - 2.4e-14 53.6 0.0 3.4e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF24309 - 1.6e-13 50.5 0.0 2e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF24309 - 3.8e-13 49.3 0.0 4.4e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF24309 - 6.5e-12 45.3 0.4 9.5e-08 31.6 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF24309 - 3.3e-10 39.7 0.0 4.2e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF24309 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF24309 - 0.01 15.2 0.1 0.018 14.3 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF24309 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain UPF0242 PF06785.11 ORF24106 - 0.18 11.9 7.3 0.23 11.6 7.3 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMEM51 PF15345.6 ORF24106 - 1.8 8.4 11.2 0.11 12.3 5.7 1.7 2 0 0 2 2 2 0 Transmembrane protein 51 Ribosomal_L22 PF00237.19 ORF20707 - 5.5e-30 103.7 0.7 5.5e-30 103.7 0.7 1.5 2 0 0 2 2 2 1 Ribosomal protein L22p/L17e Ribosomal_L22 PF00237.19 ORF19548 - 3.2e-30 104.4 0.7 5.5e-30 103.7 0.7 1.4 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e CDV3 PF15359.6 ORF16341 - 0.15 12.5 0.1 0.25 11.8 0.1 1.3 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 LMF1 PF06762.14 ORF152486 - 0.032 13.4 0.1 0.036 13.2 0.1 1.1 1 0 0 1 1 1 0 Lipase maturation factor Arf PF00025.21 ORF152361 - 5.7e-64 214.8 0.1 7.5e-64 214.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF152361 - 2.8e-14 52.9 0.0 3.4e-14 52.7 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF152361 - 5.4e-11 42.7 0.7 3e-10 40.4 0.7 2.0 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF152361 - 1.6e-08 34.3 0.0 2.1e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 ORF152361 - 1.4e-07 31.1 0.3 2.9e-07 30.1 0.3 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region G-alpha PF00503.20 ORF152361 - 6.1e-07 28.9 1.7 0.0006 19.1 0.3 2.2 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 ORF152361 - 4.3e-06 26.8 0.0 6.2e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF152361 - 0.00047 20.1 0.0 0.089 12.7 0.0 2.1 2 0 0 2 2 2 1 RsgA GTPase cobW PF02492.19 ORF152361 - 0.002 17.7 1.5 0.092 12.3 0.1 2.1 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 ORF152361 - 0.0089 16.6 0.0 0.016 15.8 0.0 1.5 1 1 0 1 1 1 1 ABC transporter Toprim_4 PF13662.6 ORF152361 - 0.0091 16.5 0.1 3.3 8.3 0.0 3.0 2 1 1 3 3 3 1 Toprim domain DUF2972 PF11186.8 ORF152361 - 0.053 13.4 0.0 0.064 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2972) DUF4455 PF14643.6 ORF152361 - 0.056 12.1 0.0 0.073 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4455) SRP54 PF00448.22 ORF152361 - 0.067 12.8 0.1 0.15 11.7 0.1 1.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Thymidylate_kin PF02223.17 ORF152361 - 0.094 12.4 0.0 0.91 9.2 0.0 2.0 2 0 0 2 2 2 0 Thymidylate kinase AAA_24 PF13479.6 ORF152361 - 0.13 12.0 0.5 1.8 8.3 0.1 1.9 1 1 1 2 2 2 0 AAA domain DUF4116 PF13475.6 ORF151101 - 0.3 10.8 1.7 4.6 7.1 0.0 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4116) FlgO PF17680.1 ORF150529 - 0.064 13.0 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 FlgO protein DUF4806 PF16064.5 ORF150529 - 0.21 11.9 2.6 7.8 6.9 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4806) POT1 PF02765.17 ORF149965 - 0.0024 17.7 0.6 0.003 17.4 0.6 1.2 1 0 0 1 1 1 1 Telomeric single stranded DNA binding POT1/CDC13 Xan_ur_permease PF00860.20 ORF14996 - 0.00047 19.0 1.7 0.00081 18.2 0.2 1.8 1 1 1 2 2 2 1 Permease family Glycos_transf_1 PF00534.20 ORF148757 - 7.3e-29 100.5 0.0 8.4e-29 100.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF148757 - 8.2e-16 58.7 0.0 1.2e-15 58.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF148757 - 0.00073 19.9 0.0 0.0011 19.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Ribosomal_L37 PF08561.10 ORF148564 - 4.6e-07 30.4 0.3 4.6e-07 30.4 0.3 2.0 1 1 1 2 2 2 1 Mitochondrial ribosomal protein L37 DUF3267 PF11667.8 ORF148122 - 4 7.8 7.7 0.71 10.2 2.4 2.3 2 1 0 2 2 2 0 Putative zincin peptidase Sugar_tr PF00083.24 ORF147740 - 1.3e-16 60.5 8.0 1.6e-16 60.3 8.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF147740 - 7.2e-12 44.9 3.4 8.2e-12 44.7 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily B9-C2 PF07162.11 ORF147740 - 0.05 13.8 0.0 0.077 13.2 0.0 1.2 1 0 0 1 1 1 0 Ciliary basal body-associated, B9 protein MFS_1_like PF12832.7 ORF147740 - 0.25 10.1 5.6 0.33 9.8 5.6 1.2 1 0 0 1 1 1 0 MFS_1 like family PKcGMP_CC PF16808.5 ORF147338 - 0.0001 22.1 2.5 0.0001 22.1 2.5 4.3 5 0 0 5 5 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF641 PF04859.12 ORF147338 - 0.00011 22.5 3.4 0.00011 22.5 3.4 3.0 1 1 1 2 2 1 1 Plant protein of unknown function (DUF641) DivIC PF04977.15 ORF147338 - 0.00015 21.5 22.9 0.023 14.4 2.2 3.4 2 1 0 3 3 3 2 Septum formation initiator Fib_alpha PF08702.10 ORF147338 - 0.00023 21.3 15.5 0.00023 21.3 15.5 2.3 1 1 1 2 2 2 1 Fibrinogen alpha/beta chain family CEP63 PF17045.5 ORF147338 - 0.0021 18.0 25.8 0.019 14.9 11.8 2.1 1 1 1 2 2 2 2 Centrosomal protein of 63 kDa TPR_MLP1_2 PF07926.12 ORF147338 - 0.0039 17.2 19.5 0.0039 17.2 19.5 2.2 1 1 1 2 2 2 1 TPR/MLP1/MLP2-like protein ERM PF00769.19 ORF147338 - 0.0078 16.1 13.6 0.0078 16.1 13.6 2.0 1 1 1 2 2 2 1 Ezrin/radixin/moesin family DHR10 PF18595.1 ORF147338 - 0.01 15.9 4.2 0.01 15.9 4.2 3.1 1 1 2 3 3 3 0 Designed helical repeat protein 10 domain TMF_DNA_bd PF12329.8 ORF147338 - 0.01 15.8 37.3 0.27 11.3 9.3 3.2 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Tropomyosin_1 PF12718.7 ORF147338 - 0.014 15.5 34.5 0.24 11.5 12.3 3.0 1 1 2 3 3 3 0 Tropomyosin like VGPC1_C PF16799.5 ORF147338 - 0.019 15.0 1.7 0.019 15.0 1.7 2.9 2 1 1 3 3 3 0 C-terminal membrane-localisation domain of ion-channel, VCN1 DUF4200 PF13863.6 ORF147338 - 0.019 15.3 31.1 0.021 15.3 16.6 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) GAS PF13851.6 ORF147338 - 0.02 14.3 30.4 0.22 10.8 6.1 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Exonuc_VII_L PF02601.15 ORF147338 - 0.037 13.6 13.9 0.053 13.1 13.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit ADIP PF11559.8 ORF147338 - 0.058 13.5 28.2 1.1 9.3 4.3 3.1 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding DUF3584 PF12128.8 ORF147338 - 0.064 10.8 23.5 0.081 10.4 23.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF4164 PF13747.6 ORF147338 - 0.067 13.5 10.2 1.1 9.6 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) SlyX PF04102.12 ORF147338 - 0.072 13.7 18.3 0.77 10.4 1.9 3.5 1 1 2 3 3 3 0 SlyX WEMBL PF05701.11 ORF147338 - 0.076 11.7 22.9 1.3 7.6 23.0 1.9 1 1 0 1 1 1 0 Weak chloroplast movement under blue light Fungal_TACC PF12709.7 ORF147338 - 0.083 13.4 26.4 0.37 11.3 5.2 3.3 2 1 1 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF4407 PF14362.6 ORF147338 - 0.11 11.8 18.3 1.2 8.4 17.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Lebercilin PF15619.6 ORF147338 - 0.11 12.1 27.4 2.8 7.5 26.9 2.5 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease Fez1 PF06818.15 ORF147338 - 0.12 12.9 25.1 0.27 11.7 25.1 1.6 1 1 0 1 1 1 0 Fez1 Leu_zip PF15294.6 ORF147338 - 0.13 11.7 27.0 0.64 9.5 17.2 2.1 1 1 1 2 2 2 0 Leucine zipper KASH_CCD PF14662.6 ORF147338 - 0.14 12.0 28.7 0.085 12.7 5.3 2.2 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH Cnn_1N PF07989.11 ORF147338 - 0.14 12.3 29.2 1.6 8.9 2.7 3.2 1 1 2 3 3 3 0 Centrosomin N-terminal motif 1 Csm1_N PF18504.1 ORF147338 - 0.17 12.2 29.9 0.41 11.0 4.3 3.9 2 2 2 4 4 4 0 Csm1 N-terminal domain OmpH PF03938.14 ORF147338 - 0.18 12.1 27.8 0.6 10.4 15.4 2.3 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) DLP_helical PF18709.1 ORF147338 - 0.18 11.0 19.4 0.68 9.1 7.9 2.2 1 1 1 2 2 2 0 Dynamin-like helical domain Spc7 PF08317.11 ORF147338 - 0.18 10.6 27.3 0.032 13.1 14.1 2.0 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF5069 PF16798.5 ORF147338 - 0.2 11.8 7.4 1.1 9.5 0.8 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF5069) Rootletin PF15035.6 ORF147338 - 0.21 11.6 24.9 3.5 7.6 24.9 2.2 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion GrpE PF01025.19 ORF147338 - 0.22 11.2 29.0 0.095 12.4 7.5 3.0 1 1 2 3 3 3 0 GrpE AAA_13 PF13166.6 ORF147338 - 0.22 10.1 22.2 0.028 13.1 2.6 2.0 1 1 1 2 2 2 0 AAA domain Ax_dynein_light PF10211.9 ORF147338 - 0.26 11.2 28.2 0.84 9.6 15.2 2.4 1 1 2 3 3 3 0 Axonemal dynein light chain TACC_C PF05010.14 ORF147338 - 0.26 11.0 27.8 0.84 9.4 10.6 2.8 1 1 2 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal ATG16 PF08614.11 ORF147338 - 0.3 11.3 23.2 0.059 13.6 7.6 2.4 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Jnk-SapK_ap_N PF09744.9 ORF147338 - 0.32 11.2 28.9 0.23 11.7 9.6 2.3 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Golgin_A5 PF09787.9 ORF147338 - 0.33 10.4 26.7 0.076 12.5 6.1 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 Prefoldin_2 PF01920.20 ORF147338 - 0.36 10.8 33.7 0.39 10.7 5.4 3.3 1 1 1 3 3 3 0 Prefoldin subunit DUF4140 PF13600.6 ORF147338 - 0.42 11.1 13.8 0.78 10.2 0.4 3.1 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) BRE1 PF08647.11 ORF147338 - 0.43 10.7 33.8 3.4 7.8 6.0 3.3 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase bZIP_1 PF00170.21 ORF147338 - 0.44 10.7 28.1 1.2 9.3 5.5 3.8 2 1 1 3 3 3 0 bZIP transcription factor APG6_N PF17675.1 ORF147338 - 0.46 11.0 31.0 0.94 10.0 9.2 2.5 1 1 1 2 2 2 0 Apg6 coiled-coil region Prominin PF05478.11 ORF147338 - 0.57 8.1 22.0 0.092 10.7 13.3 2.0 1 1 1 2 2 2 0 Prominin UPF0242 PF06785.11 ORF147338 - 0.71 10.0 31.4 0.37 10.9 17.8 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF3450 PF11932.8 ORF147338 - 0.71 9.1 25.6 1.3 8.3 7.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF948 PF06103.11 ORF147338 - 0.75 10.1 12.4 21 5.5 0.7 3.1 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) HIP1_clath_bdg PF16515.5 ORF147338 - 0.82 10.3 28.3 0.17 12.5 6.2 3.1 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 HMMR_N PF15905.5 ORF147338 - 0.85 9.0 33.3 2 7.8 33.3 1.7 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal NPV_P10 PF05531.12 ORF147338 - 0.88 10.1 15.3 1.1 9.8 1.3 3.2 1 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Spectrin PF00435.21 ORF147338 - 1.1 9.8 21.7 2.9 8.4 9.8 2.3 1 1 1 2 2 2 0 Spectrin repeat Dzip-like_N PF13815.6 ORF147338 - 1.2 9.1 23.8 0.74 9.8 3.3 3.1 1 1 2 3 3 3 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal WXG100 PF06013.12 ORF147338 - 1.4 9.2 9.5 7.2 6.9 0.3 3.3 2 1 1 3 3 3 0 Proteins of 100 residues with WXG PhoU PF01895.19 ORF147338 - 1.6 9.3 10.4 2.1 8.9 0.7 3.0 1 1 1 2 2 2 0 PhoU domain Nup54 PF13874.6 ORF147338 - 1.7 8.7 16.5 5.3 7.1 1.9 2.1 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 Rho_Binding PF08912.11 ORF147338 - 1.7 9.5 33.6 1.8 9.5 7.6 4.1 1 1 2 3 3 2 0 Rho Binding DUF4618 PF15397.6 ORF147338 - 2 7.8 27.2 6.1 6.2 27.2 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) TolA_bind_tri PF16331.5 ORF147338 - 2 8.5 17.6 2 8.5 3.2 3.1 1 1 1 3 3 3 0 TolA binding protein trimerisation YtxH PF12732.7 ORF147338 - 2.8 8.5 17.1 20 5.8 3.1 3.4 1 1 1 2 2 2 0 YtxH-like protein Prefoldin PF02996.17 ORF147338 - 3.6 7.5 24.6 4.7 7.1 2.8 3.6 1 1 3 4 4 4 0 Prefoldin subunit RPW8 PF05659.11 ORF147338 - 3.7 7.3 18.4 1.4 8.6 3.4 3.3 1 1 3 4 4 4 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 FlaC_arch PF05377.11 ORF147338 - 4.1 7.9 19.7 3.1 8.3 1.6 3.5 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) CENP-H PF05837.12 ORF147338 - 4.5 7.7 25.8 8.2 6.9 9.9 2.7 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Fmp27_WPPW PF10359.9 ORF147338 - 5.1 5.8 23.2 1.3 7.8 7.8 2.0 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain Swi5 PF07061.11 ORF147338 - 5.4 7.2 23.4 2.4 8.3 3.3 3.5 2 1 0 2 2 2 0 Swi5 Lectin_N PF03954.14 ORF147338 - 5.4 6.8 17.6 0.52 10.1 1.1 3.0 1 1 2 3 3 3 0 Hepatic lectin, N-terminal domain DUF3837 PF12939.7 ORF147338 - 6.1 7.3 15.6 0.6 10.5 3.0 3.0 1 1 1 3 3 3 0 Domain of unknown function (DUF3837) Mod_r PF07200.13 ORF147338 - 6.3 6.9 29.3 3.4 7.7 9.1 3.0 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein Cluap1 PF10234.9 ORF147338 - 6.6 6.0 28.2 0.3 10.4 3.7 2.9 1 1 0 2 2 2 0 Clusterin-associated protein-1 DUF724 PF05266.14 ORF147338 - 7.3 6.4 26.3 11 5.8 13.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF16 PF01519.16 ORF147338 - 7.3 7.1 24.2 0.41 11.2 3.1 3.1 1 1 2 3 3 3 0 Protein of unknown function DUF16 Atg14 PF10186.9 ORF147338 - 8.6 5.3 25.4 1 8.4 4.8 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Mvb12 PF09452.10 ORF147338 - 8.9 6.8 11.5 0.54 10.7 2.6 2.7 1 1 0 2 2 2 0 ESCRT-I subunit Mvb12 DUF5082 PF16888.5 ORF147338 - 9 6.6 25.8 5.2 7.4 15.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Muted PF14942.6 ORF147338 - 9.5 6.6 28.8 28 5.0 7.0 2.7 1 1 2 3 3 3 0 Organelle biogenesis, Muted-like protein FHA PF00498.26 ORF146112 - 1.5e-17 63.7 0.0 2.7e-17 62.9 0.0 1.5 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF146112 - 3.5e-06 27.3 0.0 0.00011 22.5 0.0 2.2 1 1 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Arf PF00025.21 ORF145496 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF145496 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF145496 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF145496 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF145496 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF145496 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF145496 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF145496 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase Mito_morph_reg PF14972.6 ORF144942 - 0.0083 15.7 0.5 0.0083 15.7 0.5 1.6 2 0 0 2 2 2 1 Mitochondrial morphogenesis regulator HPIP_like PF18524.1 ORF143613 - 0.051 13.4 2.2 0.051 13.4 2.2 2.7 2 1 0 2 2 2 0 High potential iron-sulfur protein like Defensin_beta_2 PF13841.6 ORF143613 - 1 9.9 0.1 1 9.9 0.1 3.7 3 0 0 3 3 3 0 Beta defensin Pkinase PF00069.25 ORF143160 - 9.4e-25 87.5 0.0 1.3e-24 87.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF143160 - 8e-12 45.0 0.0 1e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Methyltransf_3 PF01596.17 ORF140707 - 7.7e-64 214.8 0.1 8.5e-64 214.6 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF140707 - 1.3e-12 48.6 0.0 1.8e-12 48.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF140707 - 7.2e-07 29.1 0.0 9e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF140707 - 0.00014 22.5 0.0 0.0002 22.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF140707 - 0.0016 18.2 0.0 0.0023 17.7 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 ORF140707 - 0.018 14.4 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF140707 - 0.02 14.2 0.0 0.025 13.9 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.7 ORF140707 - 0.034 14.1 0.0 0.17 11.8 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF140707 - 0.062 14.0 0.0 0.13 12.9 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain TMEM219 PF14940.6 ORF140513 - 0.14 11.7 2.9 0.26 10.8 2.9 1.4 1 0 0 1 1 1 0 Transmembrane 219 Pox_F11 PF04943.12 ORF138848 - 0.07 12.2 0.3 0.086 11.9 0.3 1.1 1 0 0 1 1 1 0 Poxvirus F11 protein Peptidase_S24 PF00717.23 ORF138128 - 3.8e-10 39.6 0.1 6e-10 38.9 0.1 1.3 1 0 0 1 1 1 1 Peptidase S24-like Ribonuc_L-PSP PF01042.21 ORF135136 - 5.3e-31 107.2 0.0 7.4e-31 106.7 0.0 1.2 1 0 0 1 1 1 1 Endoribonuclease L-PSP Abhydrolase_6 PF12697.7 ORF132694 - 0.017 15.7 0.1 0.021 15.5 0.1 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase family CGI-121 PF08617.10 ORF132604 - 2.8e-17 63.3 0.7 3.5e-17 63.0 0.7 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 Arf PF00025.21 ORF132538 - 1.6e-76 255.6 0.1 1.9e-76 255.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF132538 - 4.2e-15 55.6 0.0 5.1e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF132538 - 7.1e-15 55.3 0.1 9.6e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF132538 - 4.7e-13 49.0 0.0 5.1e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF132538 - 7.2e-11 41.8 1.3 5.1e-07 29.2 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF132538 - 3.5e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF132538 - 2.2e-06 27.7 0.1 3.6e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF132538 - 0.0082 15.5 0.2 0.011 15.1 0.2 1.4 1 1 0 1 1 1 1 6-phosphofructo-2-kinase Ras PF00071.22 ORF132297 - 0.014 15.0 0.1 0.055 13.1 0.1 2.0 1 1 0 1 1 1 0 Ras family TMEM208_SND2 PF05620.11 ORF132048 - 8e-17 61.5 9.2 8.3e-12 45.2 0.8 2.0 1 1 1 2 2 2 2 SRP-independent targeting protein 2/TMEM208 Selenoprotein_S PF06936.11 ORF132048 - 0.035 13.9 2.0 0.075 12.8 2.0 1.6 1 1 0 1 1 1 0 Selenoprotein S (SelS) Transformer PF06495.11 ORF132015 - 8.9 6.4 11.1 12 5.9 11.1 1.2 1 0 0 1 1 1 0 Fruit fly transformer protein PTPS PF01242.19 ORF128219 - 2.6e-08 33.9 0.0 3.3e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase HEAT_PBS PF03130.16 ORF127319 - 0.061 14.0 0.0 0.17 12.7 0.0 1.8 1 0 0 1 1 1 0 PBS lyase HEAT-like repeat zf-CSL PF05207.13 ORF12703 - 0.089 12.5 0.1 0.17 11.6 0.1 1.5 1 0 0 1 1 1 0 CSL zinc finger DUF2554 PF10829.8 ORF124534 - 0.022 15.1 0.0 0.039 14.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2554) YdiH PF15930.5 ORF123171 - 0.16 12.2 0.0 0.38 10.9 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function WD40 PF00400.32 ORF121970 - 5.3e-16 58.7 13.5 3.7e-06 27.6 0.1 4.8 5 0 0 5 5 5 4 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF121970 - 7.3e-08 31.7 0.3 0.0067 15.4 0.0 3.2 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 ORF121970 - 3.4e-06 27.3 0.0 0.097 13.0 0.0 3.5 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF121970 - 7.1e-06 25.8 0.9 0.29 11.1 0.1 3.2 3 0 0 3 3 3 2 WD40-like Beta Propeller Repeat eIF2A PF08662.11 ORF121970 - 0.021 14.7 0.0 0.13 12.1 0.0 1.9 1 1 1 2 2 2 0 Eukaryotic translation initiation factor eIF2A Cytochrom_D1 PF02239.16 ORF121970 - 0.037 12.6 0.0 0.039 12.5 0.0 1.2 1 0 0 1 1 1 0 Cytochrome D1 heme domain Proteasome_A_N PF10584.9 ORF121970 - 0.53 10.0 5.8 6.9 6.4 0.2 2.8 3 0 0 3 3 3 0 Proteasome subunit A N-terminal signature Man-6-P_recep PF02157.15 ORF121077 - 0.35 9.9 2.9 0.33 10.0 2.1 1.3 1 1 0 1 1 1 0 Mannose-6-phosphate receptor Arf PF00025.21 ORF119707 - 2e-78 261.8 0.3 2.3e-78 261.6 0.3 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF119707 - 2.4e-14 53.6 0.0 3.4e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF119707 - 1.6e-13 50.5 0.0 2e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF119707 - 3.8e-13 49.3 0.0 4.4e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF119707 - 6.5e-12 45.3 0.4 9.5e-08 31.6 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF119707 - 3.3e-10 39.7 0.0 4.2e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF119707 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF119707 - 0.01 15.2 0.1 0.018 14.3 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF119707 - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATP-synt_C PF00137.21 ORF119464 - 6.1e-27 93.8 33.4 3.3e-14 53.0 12.9 2.2 2 0 0 2 2 2 2 ATP synthase subunit C G0-G1_switch_2 PF15103.6 ORF119464 - 0.052 14.0 0.1 0.14 12.6 0.0 1.8 2 0 0 2 2 2 0 G0/G1 switch protein 2 PIRT PF15099.6 ORF119464 - 0.069 12.7 3.5 3.6 7.2 0.4 2.4 2 1 0 2 2 2 0 Phosphoinositide-interacting protein family LtrA PF06772.11 ORF119464 - 0.096 11.9 4.3 0.12 11.6 4.3 1.3 1 0 0 1 1 1 0 Bacterial low temperature requirement A protein (LtrA) Oxidored_q2 PF00420.24 ORF119464 - 4.9 6.8 11.9 0.45 10.2 1.2 2.9 1 1 2 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SH3_2 PF07653.17 ORF118392 - 3.8e-05 23.3 0.0 7e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_9 PF14604.6 ORF118392 - 0.00099 18.9 0.1 0.002 18.0 0.1 1.5 1 0 0 1 1 1 1 Variant SH3 domain Cas3_C PF18395.1 ORF118203 - 0.15 12.5 0.0 0.23 12.0 0.0 1.4 1 0 0 1 1 1 0 Cas3 C-terminal domain GyrB_insert PF18053.1 ORF118120 - 0.077 12.9 13.1 0.34 10.8 1.7 2.0 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain Spike_NTD PF16451.5 ORF118120 - 0.081 12.3 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain Med10 PF09748.9 ORF118120 - 1.7 8.6 13.4 1.4 8.9 0.6 3.0 1 1 1 2 2 2 0 Transcription factor subunit Med10 of Mediator complex UTRA PF07702.13 ORF108683 - 7.4e-36 123.1 0.2 9.1e-36 122.8 0.2 1.1 1 0 0 1 1 1 1 UTRA domain Peptidase_S51 PF03575.17 ORF105610 - 1.8e-13 50.6 0.0 3.7e-13 49.6 0.0 1.5 1 1 0 1 1 1 1 Peptidase family S51 CP_ATPgrasp_2 PF14403.6 ORF105610 - 0.17 10.8 0.1 0.23 10.3 0.1 1.1 1 0 0 1 1 1 0 Circularly permuted ATP-grasp type 2 NADH_4Fe-4S PF10589.9 ORF104696 - 8.8 6.5 9.8 8.8 6.5 3.9 2.4 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Casc1_N PF15927.5 ORF104669 - 0.022 14.5 0.0 0.14 11.9 0.0 1.9 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus Es2 PF09751.9 ORF104236 - 2.3e-06 27.6 4.7 4.8e-06 26.6 4.7 1.5 1 1 0 1 1 1 1 Nuclear protein Es2 TruB_N PF01509.18 ORF104236 - 0.02 15.3 0.7 0.034 14.5 0.7 1.4 1 0 0 1 1 1 0 TruB family pseudouridylate synthase (N terminal domain) Arf PF00025.21 ORF102138 - 2.5e-74 248.5 0.2 3e-74 248.2 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF102138 - 7.2e-14 52.0 0.2 9.9e-14 51.6 0.2 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF102138 - 1.1e-13 51.0 0.0 1.3e-13 50.7 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF102138 - 2.9e-12 46.5 0.0 3.1e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF102138 - 3.2e-11 43.0 2.2 1.7e-07 30.8 0.2 2.1 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF102138 - 1.5e-09 37.6 0.0 1.8e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF102138 - 1.4e-05 25.2 0.1 2.3e-05 24.4 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_31 PF13614.6 ORF102138 - 0.041 13.8 0.0 0.05 13.5 0.0 1.3 1 1 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF102138 - 0.049 12.9 0.3 0.084 12.2 0.1 1.4 2 0 0 2 2 2 0 6-phosphofructo-2-kinase SRP54 PF00448.22 ORF102138 - 0.14 11.8 0.3 0.28 10.8 0.3 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain FXa_inhibition PF14670.6 NODE_39027_length_538_cov_3.083499_g31650_i0reverse_frame_1 - 3.8 7.9 7.5 0.51 10.7 0.4 2.8 2 1 0 2 2 2 0 Coagulation Factor Xa inhibitory site Macro PF01661.21 NODE_39012_length_538_cov_85.984095_g31635_i0forward_frame_1 - 1.3e-21 76.9 0.0 2.6e-21 75.8 0.0 1.5 2 0 0 2 2 2 1 Macro domain DUF2759 PF10958.8 NODE_39012_length_538_cov_85.984095_g31635_i0forward_frame_1 - 0.04 13.6 0.0 0.066 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) Macro_2 PF14519.6 NODE_39012_length_538_cov_85.984095_g31635_i0forward_frame_1 - 0.067 12.5 0.1 0.19 11.0 0.0 1.6 2 0 0 2 2 2 0 Macro-like domain Inh PF02974.14 NODE_39010_length_538_cov_94.540755_g31633_i0reverse_frame_1 - 0.096 12.8 0.6 0.38 10.9 0.0 2.1 2 0 0 2 2 2 0 Protease inhibitor Inh Fer2_3 PF13085.6 NODE_39010_length_538_cov_94.540755_g31633_i0forward_frame_1 - 1.4 9.0 11.2 3.7 7.6 0.5 2.4 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain LisH_TPL PF17814.1 NODE_38974_length_539_cov_1.940476_g31603_i0reverse_frame_1 - 0.092 12.4 0.8 0.23 11.1 0.3 1.8 2 0 0 2 2 2 0 LisH-like dimerisation domain Death PF00531.22 NODE_38949_length_539_cov_146.712302_g31580_i0reverse_frame_1 - 0.029 14.5 0.9 0.05 13.8 0.9 1.4 1 0 0 1 1 1 0 Death domain CiPC PF15800.5 NODE_38949_length_539_cov_146.712302_g31580_i0reverse_frame_1 - 5.2 6.7 11.7 4.2 7.0 3.8 2.2 2 0 0 2 2 2 0 Clock interacting protein circadian Glyco_hydro_85 PF03644.13 NODE_38897_length_540_cov_155.188119_g31536_i0reverse_frame_1 - 0.13 11.6 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 85 FAST_1 PF06743.15 NODE_38856_length_541_cov_75.306324_g31500_i0forward_frame_2 - 0.016 15.2 0.0 0.96 9.4 0.0 2.8 2 1 1 3 3 3 0 FAST kinase-like protein, subdomain 1 DSHCT PF08148.12 NODE_38853_length_541_cov_89.837945_g31497_i0forward_frame_3 - 0.048 13.3 0.1 0.07 12.8 0.1 1.3 1 1 0 1 1 1 0 DSHCT (NUC185) domain O-antigen_lig PF13425.6 NODE_38853_length_541_cov_89.837945_g31497_i0forward_frame_3 - 8.6 5.0 5.9 10 4.8 5.9 1.3 1 0 0 1 1 1 0 O-antigen ligase like membrane protein zf-4CXXC_R1 PF10497.9 NODE_38850_length_541_cov_116.920949_g31494_i0reverse_frame_3 - 0.45 10.8 7.1 0.96 9.7 7.1 1.6 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 SH3_10 PF17902.1 NODE_38849_length_541_cov_119.405138_g31493_i0reverse_frame_2 - 0.071 13.2 0.0 0.17 12.0 0.0 1.7 1 0 0 1 1 1 0 SH3 domain Molybdop_Fe4S4 PF04879.16 NODE_38848_length_541_cov_143.960474_g31492_i0reverse_frame_3 - 0.023 14.6 14.3 0.029 14.4 0.4 3.5 4 0 0 4 4 4 0 Molybdopterin oxidoreductase Fe4S4 domain DUF679 PF05078.12 NODE_38848_length_541_cov_143.960474_g31492_i0reverse_frame_2 - 0.019 14.9 0.3 0.36 10.8 0.1 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF679) TMEM100 PF16311.5 NODE_38848_length_541_cov_143.960474_g31492_i0forward_frame_2 - 0.16 11.5 2.7 0.37 10.4 2.7 1.7 1 0 0 1 1 1 0 Transmembrane protein 100 RNA_pol PF00940.19 NODE_38833_length_542_cov_2.566075_g31477_i0reverse_frame_2 - 1.8e-71 241.2 0.0 2e-71 241.0 0.0 1.0 1 0 0 1 1 1 1 DNA-dependent RNA polymerase ExbD PF02472.16 NODE_38833_length_542_cov_2.566075_g31477_i0forward_frame_3 - 0.31 11.2 0.8 0.52 10.5 0.8 1.3 1 0 0 1 1 1 0 Biopolymer transport protein ExbD/TolR Peptidase_C36 PF05415.11 NODE_38815_length_542_cov_80.347140_g31460_i0reverse_frame_3 - 0.0082 16.3 0.0 0.012 15.8 0.0 1.3 1 0 0 1 1 1 1 Beet necrotic yellow vein furovirus-type papain-like endopeptidase Inhibitor_Mig-6 PF11555.8 NODE_38811_length_542_cov_82.672584_g31456_i0reverse_frame_2 - 0.35 11.0 2.6 0.84 9.8 2.5 1.8 1 1 0 1 1 1 0 EGFR receptor inhibitor Mig-6 Pkinase PF00069.25 NODE_38811_length_542_cov_82.672584_g31456_i0forward_frame_3 - 7.6e-33 114.0 0.0 8.9e-33 113.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_38811_length_542_cov_82.672584_g31456_i0forward_frame_3 - 6.1e-10 38.8 0.0 8.1e-10 38.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF5511 PF17630.2 NODE_38802_length_542_cov_120.668639_g31447_i0reverse_frame_3 - 0.18 12.0 1.9 0.34 11.1 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5511) Ras PF00071.22 NODE_38802_length_542_cov_120.668639_g31447_i0forward_frame_3 - 9.6e-08 31.8 0.8 1.3e-07 31.3 0.8 1.3 1 0 0 1 1 1 1 Ras family MMR_HSR1_Xtn PF16897.5 NODE_38802_length_542_cov_120.668639_g31447_i0forward_frame_3 - 0.016 15.2 0.4 0.033 14.2 0.4 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Cas_St_Csn2 PF16813.5 NODE_38802_length_542_cov_120.668639_g31447_i0forward_frame_3 - 0.027 13.6 6.4 0.017 14.3 4.5 1.5 1 1 1 2 2 2 0 CRISPR-associated protein Csn2 subfamily St DUF3958 PF13125.6 NODE_38802_length_542_cov_120.668639_g31447_i0forward_frame_3 - 0.64 10.3 5.1 9.2 6.5 0.1 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF3958) DUF3038 PF11237.8 NODE_38799_length_542_cov_155.613412_g31444_i0reverse_frame_2 - 0.84 9.7 2.2 4.7 7.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3038) Pox_E10 PF04805.12 NODE_38799_length_542_cov_155.613412_g31444_i0forward_frame_3 - 8.4 6.3 5.5 35 4.4 0.5 2.2 2 0 0 2 2 2 0 E10-like protein conserved region DUF1518 PF07469.12 NODE_38799_length_542_cov_155.613412_g31444_i0forward_frame_2 - 0.14 12.6 12.8 0.23 11.9 0.6 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF1518) ANAPC2 PF08672.11 NODE_38782_length_542_cov_64769.015779_g31429_i0reverse_frame_2 - 0.089 13.3 0.4 0.15 12.6 0.4 1.4 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 DUF561 PF04481.12 NODE_38781_length_543_cov_1.435039_g31428_i0forward_frame_2 - 0.18 10.9 0.7 0.32 10.1 0.5 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF561) EF-hand_7 PF13499.6 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 6.4e-06 26.5 0.9 1.2e-05 25.6 0.9 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 2.8e-05 23.3 0.3 5.6e-05 22.4 0.3 1.5 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 0.00017 21.4 0.1 0.00031 20.5 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 0.005 16.7 0.4 0.014 15.3 0.4 1.8 1 0 0 1 1 1 1 EF-hand domain TMEM252 PF15664.5 NODE_38778_length_543_cov_2.661417_g31425_i0reverse_frame_2 - 0.022 14.5 0.1 0.03 14.0 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 252 family SpoU_methylase PF00588.19 NODE_38775_length_543_cov_3.486220_g31422_i0reverse_frame_2 - 1.9e-36 125.3 0.0 2.3e-36 125.1 0.0 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 NODE_38775_length_543_cov_3.486220_g31422_i0reverse_frame_2 - 1.8e-05 24.9 0.0 0.0002 21.6 0.0 2.1 2 0 0 2 2 2 1 RNA 2'-O ribose methyltransferase substrate binding Tat PF00539.18 NODE_38770_length_543_cov_3.781496_g31417_i0reverse_frame_3 - 0.024 14.8 2.2 0.042 14.0 2.2 1.4 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks134.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks134.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks134.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks134.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:01:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_M24 PF00557.24 NODE_38768_length_543_cov_4.289370_g31415_i0forward_frame_2 - 1.4e-14 54.3 0.3 1.7e-14 54.0 0.3 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 zf-C3HC4_2 PF13923.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 2.4e-07 30.5 11.6 4.1e-07 29.7 11.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 3.1e-07 30.3 9.1 5.5e-07 29.5 9.1 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 6e-07 29.2 12.9 9.2e-07 28.6 12.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 2.2e-06 27.7 11.0 3.5e-06 27.1 11.0 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 2.6e-05 24.4 12.0 3.8e-05 23.9 12.0 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.00035 20.5 13.3 0.00054 19.9 13.3 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_6 PF14835.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.0081 16.0 8.2 0.015 15.1 8.2 1.5 1 1 0 1 1 1 1 zf-RING of BARD1-type protein Prok-RING_4 PF14447.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.012 15.5 8.2 0.024 14.5 8.2 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_10 PF16685.5 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.035 14.2 6.3 0.057 13.6 5.7 1.6 2 0 0 2 2 2 0 zinc RING finger of MSL2 DUF1272 PF06906.11 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.37 10.9 7.3 0.75 9.9 7.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) Tmemb_9 PF05434.11 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 0.66 9.9 2.6 1 9.3 2.6 1.2 1 0 0 1 1 1 0 TMEM9 zf-RING_11 PF17123.5 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 2.8 7.8 11.9 0.57 10.0 6.2 2.3 1 1 1 2 2 2 0 RING-like zinc finger zf-RING_4 PF14570.6 NODE_38759_length_543_cov_98.606299_g31406_i0forward_frame_2 - 3.2 7.6 10.0 7.2 6.5 10.0 1.6 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain RCC1_2 PF13540.6 NODE_38756_length_543_cov_128.129921_g31403_i0forward_frame_3 - 2.4e-23 81.4 5.5 6.3e-10 38.6 0.4 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_38756_length_543_cov_128.129921_g31403_i0forward_frame_3 - 2.5e-05 24.8 2.8 0.73 10.5 0.2 4.5 5 0 0 5 5 5 2 Regulator of chromosome condensation (RCC1) repeat PQQ_3 PF13570.6 NODE_38756_length_543_cov_128.129921_g31403_i0forward_frame_3 - 0.14 12.7 1.1 13 6.5 0.0 3.2 3 0 0 3 3 3 0 PQQ-like domain Kelch_4 PF13418.6 NODE_38756_length_543_cov_128.129921_g31403_i0forward_frame_3 - 0.43 10.6 2.4 3.8 7.6 0.1 2.6 3 0 0 3 3 3 0 Galactose oxidase, central domain TBCA PF02970.16 NODE_38745_length_543_cov_271.602362_g31392_i0reverse_frame_3 - 0.0013 19.0 1.6 0.0021 18.4 1.6 1.3 1 0 0 1 1 1 1 Tubulin binding cofactor A 2_5_RNA_ligase2 PF13563.6 NODE_38745_length_543_cov_271.602362_g31392_i0reverse_frame_3 - 0.014 15.3 0.3 0.31 10.9 0.3 2.2 1 1 0 1 1 1 0 2'-5' RNA ligase superfamily TPR_9 PF13371.6 NODE_38745_length_543_cov_271.602362_g31392_i0reverse_frame_3 - 0.02 15.1 0.4 0.07 13.3 0.3 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF1547 PF07577.11 NODE_38745_length_543_cov_271.602362_g31392_i0reverse_frame_3 - 0.033 14.6 0.2 0.088 13.2 0.0 1.8 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1547) DUF4407 PF14362.6 NODE_38745_length_543_cov_271.602362_g31392_i0reverse_frame_3 - 0.043 13.2 0.9 0.052 12.9 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) betaPIX_CC PF16523.5 NODE_38745_length_543_cov_271.602362_g31392_i0reverse_frame_3 - 0.24 11.2 1.8 0.45 10.4 1.8 1.5 1 0 0 1 1 1 0 betaPIX coiled coil Toxin_3 PF00537.18 ORF99877 - 0.028 14.6 0.5 0.072 13.3 0.5 1.7 1 0 0 1 1 1 0 Scorpion toxin-like domain ZnuA PF01297.17 ORF99285 - 0.021 14.2 0.3 0.025 14.0 0.3 1.3 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Med9 PF07544.13 ORF99285 - 0.61 10.2 7.7 4.1 7.6 2.9 2.9 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 AIRC PF00731.20 ORF95590 - 1e-63 213.4 1.0 1.2e-63 213.2 1.0 1.0 1 0 0 1 1 1 1 AIR carboxylase RraB PF06877.11 ORF95590 - 0.086 13.6 0.0 0.16 12.7 0.0 1.3 1 0 0 1 1 1 0 Regulator of ribonuclease activity B PrpR_N PF06506.11 ORF95590 - 0.13 11.8 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Propionate catabolism activator DUF2201 PF09967.9 ORF95590 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 VWA-like domain (DUF2201) MFMR PF07777.11 ORF95590 - 0.22 12.1 0.9 15 6.1 0.1 2.6 2 1 1 3 3 3 0 G-box binding protein MFMR 2OG-FeII_Oxy_3 PF13640.6 ORF95353 - 7.4e-18 65.2 0.0 1e-17 64.8 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF95353 - 5.3e-11 43.0 0.0 8.1e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily SIS PF01380.22 ORF94102 - 1.3e-31 109.2 0.6 1.5e-31 108.9 0.6 1.1 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 ORF94102 - 0.00068 19.7 0.2 0.11 12.6 0.0 2.4 1 1 1 2 2 2 2 SIS domain DUF1350 PF07082.11 ORF91359 - 0.037 13.3 0.1 0.053 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1350) DUF1883 PF08980.10 ORF89838 - 0.056 13.4 0.0 0.15 12.0 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1883) DUF4834 PF16118.5 ORF89350 - 4.9 8.2 8.9 0.41 11.6 3.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Ax_dynein_light PF10211.9 ORF8005 - 0.3 11.0 7.0 2.5 8.0 0.5 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain CENP-H PF05837.12 ORF8005 - 1.9 8.9 6.7 6.8 7.1 0.9 2.2 2 0 0 2 2 2 0 Centromere protein H (CENP-H) PI3K_P85_iSH2 PF16454.5 ORF79819 - 0.2 11.2 1.6 0.3 10.7 1.6 1.2 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Pyr_excise PF03013.14 ORF7781 - 0.005 16.8 0.8 0.016 15.2 0.0 2.0 2 0 0 2 2 2 1 Pyrimidine dimer DNA glycosylase DUF2897 PF11446.8 ORF7781 - 0.064 13.1 1.7 0.064 13.1 1.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) DUF282 PF03380.14 ORF7781 - 3.4 7.7 10.2 6.3 6.8 2.2 2.7 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF282 UCR_6-4kD PF08997.10 ORF77461 - 0.13 12.2 0.8 0.27 11.2 0.5 1.7 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase complex, 6.4kD protein DUF4976 PF16347.5 ORF73771 - 0.017 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) Sulfatase_C PF14707.6 ORF73771 - 0.054 14.2 0.0 0.097 13.4 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase FlgD_ig PF13860.6 ORF72205 - 4.1e-24 84.2 3.0 4.1e-24 84.2 3.0 2.1 2 0 0 2 2 2 1 FlgD Ig-like domain FLgD_tudor PF13861.6 ORF72205 - 2.1e-15 56.7 3.3 2.1e-15 56.7 3.3 1.7 2 0 0 2 2 2 1 FlgD Tudor-like domain FlgD PF03963.14 ORF72205 - 2.7e-08 34.0 0.8 6.8e-07 29.5 0.3 2.4 2 0 0 2 2 2 1 Flagellar hook capping protein - N-terminal region MG2 PF01835.19 ORF72205 - 0.015 15.8 0.1 0.028 14.9 0.1 1.5 1 0 0 1 1 1 0 MG2 domain DUF2271 PF10029.9 ORF72205 - 0.1 12.2 0.0 0.47 10.1 0.0 1.9 1 1 1 2 2 2 0 Predicted periplasmic protein (DUF2271) Glyco_trans_1_4 PF13692.6 ORF69872 - 6.1e-19 68.8 0.1 7.5e-19 68.5 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 ORF69872 - 2.7e-15 56.3 0.0 3.3e-15 56.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF69872 - 0.01 16.2 0.0 0.016 15.6 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferases group 1 ATP1G1_PLM_MAT8 PF02038.16 ORF6917 - 0.032 13.7 0.0 0.032 13.7 0.0 2.6 3 0 0 3 3 3 0 ATP1G1/PLM/MAT8 family Sensor PF13796.6 ORF6917 - 0.033 14.2 0.3 0.033 14.2 0.3 1.7 2 0 0 2 2 2 0 Putative sensor Tmemb_9 PF05434.11 ORF6917 - 0.14 12.0 1.8 0.18 11.7 1.8 1.2 1 0 0 1 1 1 0 TMEM9 DUF2206 PF09971.9 ORF6917 - 0.15 10.8 0.2 0.21 10.3 0.2 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) Phage_tail_APC PF16778.5 ORF69111 - 0.014 15.2 0.2 0.029 14.2 0.2 1.5 1 0 0 1 1 1 0 Phage tail assembly chaperone protein CxC1 PF18802.1 ORF68935 - 0.12 12.5 1.9 0.15 12.2 1.0 1.6 1 1 1 2 2 2 0 CxC1 like cysteine cluster associated with KDZ transposases NQR2_RnfD_RnfE PF03116.15 ORF68447 - 6e-54 183.4 3.6 6.5e-54 183.3 3.6 1.0 1 0 0 1 1 1 1 NQR2, RnfD, RnfE family DUF3792 PF12670.7 ORF68447 - 0.017 15.2 2.6 0.029 14.5 2.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) Pep_deformylase PF01327.21 ORF67647 - 0.026 14.1 0.1 0.036 13.7 0.1 1.3 1 0 0 1 1 1 0 Polypeptide deformylase Phosphorylase PF00343.20 ORF6718 - 8.3e-57 193.0 1.1 9.3e-57 192.8 1.1 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase zf-C6H2 PF15801.5 ORF66905 - 0.0054 17.0 4.0 0.073 13.4 0.1 3.1 2 0 0 2 2 2 2 zf-MYND-like zinc finger, mRNA-binding SpoIISA_toxin PF14171.6 ORF66815 - 0.034 13.8 3.6 0.038 13.7 3.6 1.1 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system TcdB_N PF12918.7 ORF66815 - 0.099 12.9 5.5 3.4 8.0 3.9 2.7 2 1 0 2 2 2 0 TcdB toxin N-terminal helical domain Tropomyosin_1 PF12718.7 ORF66815 - 1.8 8.7 10.4 1.9 8.6 1.4 2.2 1 1 1 2 2 2 0 Tropomyosin like Rho_Binding PF08912.11 ORF66815 - 5.3 7.9 14.7 1.9 9.3 3.3 3.1 2 1 1 3 3 3 0 Rho Binding Asp PF00026.23 ORF65812 - 5.9e-05 22.6 0.0 8.4e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Peptidase_M13 PF01431.21 ORF65812 - 0.014 15.0 0.3 0.023 14.3 0.0 1.5 2 0 0 2 2 2 0 Peptidase family M13 DUF2207 PF09972.9 ORF65812 - 0.14 10.9 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ank_2 PF12796.7 ORF64847 - 1.2e-31 109.1 0.8 7.1e-14 52.2 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF64847 - 3.6e-30 103.6 3.1 1.4e-10 41.2 0.2 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF64847 - 3.2e-25 88.1 0.2 2.7e-10 40.6 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF64847 - 6.9e-25 86.4 0.2 0.00029 21.1 0.0 5.2 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF64847 - 4.5e-24 81.9 0.1 0.00036 20.7 0.0 5.2 5 0 0 5 5 5 4 Ankyrin repeat Fib_alpha PF08702.10 ORF61088 - 0.18 12.0 0.7 0.53 10.5 0.1 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Ank_2 PF12796.7 ORF60890 - 5.3e-21 75.0 0.1 1.3e-08 35.3 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF60890 - 5.3e-19 66.3 0.0 0.0039 17.6 0.0 5.4 6 0 0 6 6 6 4 Ankyrin repeat Ank_4 PF13637.6 ORF60890 - 6e-19 68.2 0.0 1.3e-05 25.7 0.0 3.7 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF60890 - 5.6e-12 45.5 0.1 0.084 13.4 0.0 5.3 5 1 1 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 ORF60890 - 1e-05 25.7 0.1 1 9.7 0.0 4.4 3 2 2 5 5 5 2 Ankyrin repeats (many copies) adh_short PF00106.25 ORF60810 - 7.9e-15 54.8 0.0 9.8e-15 54.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF60810 - 5.9e-09 35.8 0.0 7.2e-09 35.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF373 PF04123.13 ORF54488 - 0.059 12.8 7.5 0.075 12.5 7.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF1218 PF06749.12 ORF54488 - 1.9 9.1 11.2 3.8 8.1 0.5 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1218) NADH-G_4Fe-4S_3 PF10588.9 ORF53734 - 0.79 9.3 6.2 3 7.4 0.9 2.4 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF4232 PF14016.6 ORF51154 - 0.035 14.2 0.2 0.059 13.5 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4232) Pribosyltran PF00156.27 ORF51034 - 2.9e-13 49.6 0.0 3.8e-13 49.3 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF51034 - 0.021 14.3 0.0 0.024 14.1 0.0 1.1 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 ORF51034 - 0.024 14.1 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase Herpes_UL92 PF03048.14 ORF46254 - 0.0054 16.5 0.3 0.0083 15.9 0.3 1.3 1 0 0 1 1 1 1 UL92 family COMMD1_N PF17221.3 ORF46254 - 0.014 15.7 0.1 0.026 14.8 0.1 1.5 1 0 0 1 1 1 0 COMMD1 N-terminal domain Syntaxin_2 PF14523.6 ORF46254 - 0.025 14.9 0.7 0.025 14.9 0.7 2.0 2 1 0 2 2 2 0 Syntaxin-like protein Acetyltransf_1 PF00583.25 ORF43230 - 3.2e-06 27.4 0.0 4.1e-06 27.0 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF43230 - 3.2e-06 27.5 0.0 4.8e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF43230 - 4e-05 23.6 0.0 5.8e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Fzo_mitofusin PF04799.13 ORF42746 - 0.076 12.6 2.0 0.16 11.5 0.6 2.1 2 0 0 2 2 2 0 fzo-like conserved region DUF3573 PF12097.8 ORF42746 - 0.077 11.8 0.7 0.14 11.0 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3573) DUF5315 PF17242.2 ORF42746 - 0.18 11.7 3.6 0.11 12.3 1.2 2.0 2 0 0 2 2 2 0 Disordered region of unknown function (DUF5315) PSP1 PF04468.12 ORF42746 - 5 7.5 7.8 0.4 11.0 1.9 2.2 2 1 0 2 2 2 0 PSP1 C-terminal conserved region HATPase_c PF02518.26 ORF41654 - 8.8e-06 26.2 0.0 1.9e-05 25.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF41654 - 0.00019 21.4 0.3 0.0005 20.1 0.3 1.8 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain DUF5514 PF17633.2 ORF40919 - 1 9.6 8.3 0.15 12.3 1.7 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5514) Ank_2 PF12796.7 ORF39907 - 4.2e-06 27.2 0.1 6e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF39907 - 0.00039 20.9 0.0 0.00091 19.7 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF39907 - 0.0012 19.2 0.1 1.8 9.4 0.0 2.8 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF39907 - 0.017 15.5 0.0 3.4 8.1 0.0 2.5 1 1 1 2 2 2 0 Ankyrin repeats (many copies) DUF3447 PF11929.8 ORF39907 - 0.039 13.9 9.9 0.98 9.4 0.3 3.2 1 1 2 3 3 3 0 Domain of unknown function (DUF3447) PsbR PF04725.12 ORF39907 - 0.11 12.9 0.0 0.21 12.0 0.0 1.4 1 0 0 1 1 1 0 Photosystem II 10 kDa polypeptide PsbR Cm_res_leader PF08077.11 ORF33643 - 6.1 7.3 8.1 0.37 11.0 1.4 2.7 3 0 0 3 3 3 0 Chloramphenicol resistance gene leader peptide TBD PF12845.7 ORF31675 - 0.14 12.1 3.7 0.096 12.6 1.4 1.9 2 0 0 2 2 2 0 TBD domain DUF5592 PF17332.2 ORF31471 - 3.1 8.4 11.1 0.088 13.4 4.5 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5592) TetR_C_4 PF08359.11 ORF30448 - 0.087 13.0 4.9 0.13 12.5 4.9 1.3 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region DUF349 PF03993.12 ORF30448 - 4.7 7.6 10.2 8.7 6.7 8.9 2.1 1 1 0 1 1 1 0 Domain of Unknown Function (DUF349) Arf PF00025.21 ORF26901 - 5.7e-56 188.7 0.5 6.9e-56 188.4 0.5 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 ORF26901 - 4.2e-18 65.5 0.0 4.9e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF26901 - 1.3e-12 48.0 0.1 1.8e-12 47.5 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF26901 - 9.3e-12 44.7 0.1 1.1e-11 44.6 0.1 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF26901 - 1.1e-09 38.0 1.3 6e-07 28.9 0.1 2.6 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 ORF26901 - 1.7e-07 31.3 0.1 2.7e-07 30.7 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF26901 - 9.7e-06 25.1 0.1 1.3e-05 24.7 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Scytalone_dh PF02982.14 ORF26901 - 0.0045 16.8 0.0 0.0075 16.1 0.0 1.4 1 0 0 1 1 1 1 Scytalone dehydratase PduV-EutP PF10662.9 ORF26901 - 0.01 15.6 0.6 0.069 12.9 0.0 2.3 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 ORF26901 - 0.04 13.4 1.1 1.4 8.4 1.1 2.2 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_18 PF13238.6 ORF26901 - 0.051 14.1 0.0 0.068 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain Flp_C PF05202.12 ORF25977 - 0.11 12.0 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Recombinase Flp protein G-gamma PF00631.22 ORF2568 - 0.68 10.0 4.5 3.9 7.6 1.2 2.5 2 0 0 2 2 2 0 GGL domain G-gamma PF00631.22 ORF25105 - 0.68 10.0 4.5 3.9 7.6 1.2 2.5 2 0 0 2 2 2 0 GGL domain Toxin_3 PF00537.18 ORF24982 - 0.028 14.6 0.5 0.072 13.3 0.5 1.7 1 0 0 1 1 1 0 Scorpion toxin-like domain ICMT PF04140.14 ORF23883 - 0.23 11.9 3.8 0.31 11.5 1.4 2.2 2 0 0 2 2 2 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SLC3A2_N PF16028.5 ORF22203 - 1.1 8.9 3.9 1.9 8.1 3.9 1.4 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus DUF2457 PF10446.9 ORF21875 - 3.1 6.8 4.3 4 6.5 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2457) PP-binding PF00550.25 ORF20634 - 6.5e-15 55.2 0.0 9.6e-13 48.3 0.0 2.2 2 0 0 2 2 2 2 Phosphopantetheine attachment site TPR_12 PF13424.6 ORF20634 - 0.046 14.0 0.1 0.1 12.9 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF2813 PF11398.8 ORF20468 - 0.17 11.1 0.1 0.2 10.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) Vps4_C PF09336.10 ORF19650 - 0.092 12.8 0.4 2.5 8.2 0.1 2.7 2 1 0 2 2 2 0 Vps4 C terminal oligomerisation domain Methyltransf_24 PF13578.6 ORF16259 - 2.8e-10 41.2 0.0 4e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TCR PF03638.15 ORF150895 - 0.041 14.2 1.4 0.041 14.2 1.4 1.8 2 0 0 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain DUF373 PF04123.13 ORF148810 - 0.039 13.4 7.1 0.049 13.1 7.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF1218 PF06749.12 ORF148810 - 1.4 9.4 10.9 9 6.9 1.0 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1218) DUF5077 PF16871.5 ORF148445 - 0.25 11.2 0.2 0.34 10.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5077) DUF4686 PF15742.5 ORF144952 - 0.0094 15.1 1.4 0.012 14.7 1.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4686) FAD_binding_3 PF01494.19 ORF144952 - 0.19 11.0 0.1 0.22 10.7 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain DUF1883 PF08980.10 ORF144344 - 0.052 13.5 0.0 0.15 12.0 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1883) Folate_rec PF03024.14 ORF141197 - 0.006 16.5 1.0 0.0074 16.2 1.0 1.1 1 0 0 1 1 1 1 Folate receptor family Ank_2 PF12796.7 ORF138399 - 1.6e-26 92.7 0.6 1.5e-15 57.5 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF138399 - 3.2e-22 78.3 4.2 4.4e-09 36.4 0.2 3.9 2 1 3 5 5 5 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF138399 - 5.7e-22 77.8 9.9 1.1e-09 38.7 0.1 4.1 1 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF138399 - 1.8e-20 72.4 5.0 1.1e-06 28.8 0.2 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF138399 - 3.6e-19 66.8 2.0 6.9e-05 22.9 0.1 4.6 5 0 0 5 5 5 3 Ankyrin repeat DUF4829 PF16111.5 ORF138371 - 0.16 12.8 0.1 0.2 12.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4829) WGG PF10273.9 ORF138371 - 1.2 9.8 6.1 24 5.7 6.1 2.9 1 1 0 1 1 1 0 Pre-rRNA-processing protein TSR2 Cyclin PF08613.11 ORF136778 - 7.4e-17 62.2 0.1 1.1e-16 61.7 0.1 1.2 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF136778 - 1.9e-07 30.9 0.0 3e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Cyclin, N-terminal domain Methyltransf_16 PF10294.9 ORF136406 - 4.1e-22 78.7 0.0 5.3e-22 78.4 0.0 1.0 1 0 0 1 1 1 1 Lysine methyltransferase zf-RING_11 PF17123.5 ORF136168 - 1.6e-10 40.5 4.3 1.6e-10 40.5 4.3 1.9 2 0 0 2 2 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF136168 - 1.7e-10 41.0 9.0 2.9e-10 40.3 9.0 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF136168 - 7.2e-09 35.3 10.0 1.5e-08 34.3 10.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF136168 - 3.4e-07 30.2 3.7 7.4e-07 29.1 3.7 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF136168 - 5.3e-06 26.6 9.6 3.2e-05 24.1 9.6 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF136168 - 5.8e-06 26.1 14.0 1.2e-05 25.0 14.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF136168 - 0.00052 19.9 12.8 0.00091 19.1 12.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Lipase_GDSL PF00657.22 ORF136168 - 0.0053 16.7 0.3 0.0058 16.6 0.3 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase zf-HC5HC2H PF13771.6 ORF136168 - 0.023 14.9 0.5 0.023 14.9 0.5 2.8 3 1 1 4 4 4 0 PHD-like zinc-binding domain zf-C3HC4_3 PF13920.6 ORF136168 - 0.04 13.8 10.8 0.061 13.2 10.8 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) BppU_IgG PF18667.1 ORF136168 - 0.11 12.7 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Baseplate upper protein immunoglobulin like domain zf-C3HC4_4 PF15227.6 ORF136168 - 0.26 11.5 9.9 0.83 9.9 9.9 1.9 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Presenilin PF01080.17 ORF136168 - 4.1 6.1 8.5 4.3 6.0 8.5 1.0 1 0 0 1 1 1 0 Presenilin OrfB_Zn_ribbon PF07282.11 ORF136168 - 4.8 7.2 10.0 4 7.4 0.3 2.5 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Sec62 PF03839.16 ORF136168 - 10 5.6 9.3 13 5.3 9.3 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 Phage_holin_3_5 PF16085.5 ORF135552 - 0.22 11.6 1.4 0.3 11.3 0.2 1.8 2 0 0 2 2 2 0 Bacteriophage holin Hol, superfamily III MADF_DNA_bdg PF10545.9 ORF135306 - 0.085 13.2 0.8 0.18 12.2 0.8 1.5 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like PP2C PF00481.21 ORF133296 - 2.9e-17 63.2 0.1 3.3e-17 63.0 0.1 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF133296 - 4e-06 26.6 0.0 5.1e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C FSH1 PF03959.13 ORF133296 - 0.09 12.4 0.0 0.095 12.4 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) CotJB PF12652.7 ORF133296 - 0.11 12.7 0.2 0.25 11.6 0.2 1.5 1 0 0 1 1 1 0 CotJB protein Fer4 PF00037.27 ORF132243 - 2.1e-14 52.6 16.6 7e-09 35.1 0.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 ORF132243 - 8.6e-12 45.5 10.7 1.4e-11 44.8 10.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF132243 - 3.3e-10 39.9 8.4 5.4e-05 23.3 4.1 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF132243 - 4.7e-10 40.3 6.3 0.0001 23.2 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 ORF132243 - 1.1e-09 38.3 19.2 1.9e-06 27.9 12.2 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF132243 - 1.2e-08 35.3 1.7 0.0014 19.1 0.0 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF132243 - 9e-08 32.2 10.5 3.5e-07 30.3 11.0 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF132243 - 1.5e-06 28.6 5.2 0.0084 16.6 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF132243 - 4.2e-06 26.5 12.4 0.01 15.8 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 ORF132243 - 2.9e-05 23.9 16.9 0.0046 17.0 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 ORF132243 - 0.00083 19.7 13.0 0.059 13.9 1.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 ORF132243 - 0.0057 17.2 9.9 0.53 10.9 1.5 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 ORF132243 - 0.0087 16.9 3.6 0.0087 16.9 3.6 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain ETF_QO PF05187.13 ORF132243 - 0.13 12.4 5.6 0.31 11.2 2.6 2.1 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_18 PF13746.6 ORF132243 - 0.45 10.7 11.0 50 4.1 11.2 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF132243 - 0.57 11.1 14.1 2.4 9.1 2.1 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain Asp PF00026.23 ORF13029 - 6e-05 22.6 0.0 8.4e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Peptidase_M13 PF01431.21 ORF13029 - 0.014 15.0 0.3 0.023 14.3 0.0 1.5 2 0 0 2 2 2 0 Peptidase family M13 DUF2207 PF09972.9 ORF13029 - 0.064 12.0 0.0 0.071 11.9 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Paf1 PF03985.13 ORF12865 - 0.088 11.8 3.9 0.11 11.5 3.9 1.3 1 1 0 1 1 1 0 Paf1 DUF1415 PF07209.12 ORF128196 - 0.021 14.6 0.0 0.37 10.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1415) Ank_2 PF12796.7 ORF126246 - 4.2e-06 27.2 0.1 6e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF126246 - 0.00039 20.9 0.0 0.00091 19.7 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF126246 - 0.0012 19.2 0.1 1.8 9.4 0.0 2.8 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF126246 - 0.017 15.5 0.0 3.4 8.1 0.0 2.5 1 1 1 2 2 2 0 Ankyrin repeats (many copies) DUF3447 PF11929.8 ORF126246 - 0.039 13.9 9.9 0.98 9.4 0.3 3.2 1 1 2 3 3 3 0 Domain of unknown function (DUF3447) PsbR PF04725.12 ORF126246 - 0.11 12.9 0.0 0.21 12.0 0.0 1.4 1 0 0 1 1 1 0 Photosystem II 10 kDa polypeptide PsbR MgtC PF02308.16 ORF12529 - 2.8e-30 105.1 8.5 3.6e-30 104.8 8.5 1.1 1 0 0 1 1 1 1 MgtC family YrhK PF14145.6 ORF12529 - 0.0078 16.1 2.7 0.027 14.3 2.7 2.0 1 1 0 1 1 1 1 YrhK-like protein HNOBA PF07701.14 ORF123631 - 0.039 13.4 0.2 0.051 13.0 0.2 1.1 1 0 0 1 1 1 0 Heme NO binding associated NuA4 PF09340.10 ORF119576 - 0.032 14.1 0.1 0.43 10.5 0.0 2.2 2 0 0 2 2 2 0 Histone acetyltransferase subunit NuA4 MIS13 PF08202.11 ORF119576 - 0.12 11.7 1.4 0.27 10.5 0.1 1.8 2 0 0 2 2 2 0 Mis12-Mtw1 protein family TGT PF01702.18 ORF118643 - 0.12 11.5 0.5 0.17 11.0 0.5 1.2 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase Mito_carr PF00153.27 ORF116094 - 1.2e-33 114.9 1.2 2.5e-17 62.6 0.2 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein Peptidase_C14 PF00656.22 ORF115479 - 8.4e-08 32.5 0.0 1.4e-07 31.8 0.0 1.3 1 1 0 1 1 1 1 Caspase domain PP-binding PF00550.25 ORF115287 - 0.025 14.9 0.0 0.2 12.1 0.0 2.1 2 0 0 2 2 2 0 Phosphopantetheine attachment site Ribosomal_L50 PF10501.9 ORF115287 - 0.055 13.6 0.3 0.13 12.4 0.2 1.8 1 1 1 2 2 2 0 Ribosomal subunit 39S ALMT PF11744.8 ORF111087 - 9 5.0 9.9 10 4.8 9.9 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Peptidase_M20 PF01546.28 ORF110198 - 1.1e-16 61.2 0.0 1.2e-16 61.0 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M42 PF05343.14 ORF110198 - 4.3e-05 22.7 0.0 5.5e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase M20_dimer PF07687.14 ORF110198 - 0.013 15.4 0.1 0.035 14.0 0.0 1.7 1 1 0 1 1 1 0 Peptidase dimerisation domain Homeobox_KN PF05920.11 ORF109462 - 1.3e-12 47.4 1.1 2.7e-12 46.4 1.1 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF109462 - 2e-06 27.6 1.4 3.9e-06 26.6 1.4 1.5 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF109462 - 0.054 13.0 2.7 0.098 12.1 0.1 2.5 2 0 0 2 2 2 0 Homeodomain leucine-zipper encoding, Homez zinc_ribbon_12 PF11331.8 ORF107631 - 0.077 12.8 0.5 0.21 11.5 0.5 1.7 1 0 0 1 1 1 0 Probable zinc-ribbon domain Ctr PF04145.15 ORF106839 - 1.3e-19 71.3 4.7 1.6e-19 71.0 4.7 1.1 1 0 0 1 1 1 1 Ctr copper transporter family LapA_dom PF06305.11 ORF106839 - 0.072 12.9 0.1 0.072 12.9 0.1 2.8 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain RseC_MucC PF04246.12 ORF106839 - 7.1 6.6 6.3 1.4 8.9 1.4 2.2 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Endonuclease_5 PF04493.14 ORF104311 - 2.3e-24 86.2 0.0 3.4e-24 85.6 0.0 1.2 1 0 0 1 1 1 1 Endonuclease V NADH-G_4Fe-4S_3 PF10588.9 ORF103681 - 0.79 9.3 6.2 3 7.4 0.9 2.4 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF4834 PF16118.5 ORF103278 - 0.07 14.1 0.3 0.07 14.1 0.3 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) Comm PF15957.5 ORF103278 - 0.14 12.5 0.0 0.14 12.5 0.0 2.2 2 1 0 2 2 2 0 Commissureless TRP PF06011.12 ORF103278 - 0.23 10.1 11.9 0.28 9.8 11.9 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Herpes_LMP1 PF05297.11 ORF103278 - 0.24 10.6 5.9 0.24 10.5 5.9 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) COPI_assoc PF08507.10 ORF103278 - 0.73 9.9 14.5 0.62 10.1 3.8 2.7 1 1 1 2 2 2 0 COPI associated protein Shisa PF13908.6 ORF103278 - 0.76 10.0 3.0 0.4 10.9 0.8 1.7 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator S_4TM PF18159.1 ORF103278 - 1.6 8.0 9.8 0.13 11.6 0.5 2.2 1 1 0 2 2 2 0 SMODS-associating 4TM effector domain Spo7 PF03907.13 ORF103278 - 2.6 7.4 6.2 5 6.5 4.8 1.9 2 0 0 2 2 2 0 Spo7-like protein zf-C6H2 PF15801.5 ORF103132 - 0.0054 17.0 4.0 0.073 13.4 0.1 3.1 2 0 0 2 2 2 2 zf-MYND-like zinc finger, mRNA-binding MRP-L28 PF09812.9 ORF103072 - 0.094 12.8 3.0 0.11 12.6 1.6 1.8 2 1 0 2 2 2 0 Mitochondrial ribosomal protein L28 DUF3522 PF12036.8 ORF101196 - 2.9e-22 79.9 1.1 3.6e-22 79.6 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3522) Glyco_hydro_72 PF03198.14 ORF101196 - 0.24 10.6 0.0 0.34 10.1 0.0 1.1 1 0 0 1 1 1 0 Glucanosyltransferase RRN3 PF05327.11 NODE_39195_length_535_cov_3.836000_g31808_i0reverse_frame_1 - 1.1e-07 30.9 0.6 1.1e-07 30.8 0.6 1.1 1 0 0 1 1 1 1 RNA polymerase I specific transcription initiation factor RRN3 Ibs_toxin PF13956.6 NODE_39190_length_535_cov_7.142000_g31803_i0reverse_frame_1 - 9.9e-20 70.0 21.6 1.7e-11 43.7 6.2 2.2 2 0 0 2 2 2 2 Toxin Ibs, type I toxin-antitoxin system DUF2116 PF09889.9 NODE_39190_length_535_cov_7.142000_g31803_i0reverse_frame_1 - 0.068 13.2 1.1 7.7 6.6 0.4 2.3 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF5359 PF17313.2 NODE_39190_length_535_cov_7.142000_g31803_i0reverse_frame_1 - 9.1 6.4 9.8 6.4 6.8 1.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5359) RRM_1 PF00076.22 NODE_39181_length_535_cov_83.742000_g31794_i0forward_frame_1 - 2.1e-06 27.5 0.1 4e-06 26.5 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SpoVR PF04293.13 NODE_39164_length_535_cov_171.148000_g31778_i0reverse_frame_1 - 0.032 12.9 0.0 0.044 12.5 0.0 1.1 1 0 0 1 1 1 0 SpoVR like protein YfhO PF09586.10 NODE_39162_length_535_cov_179.622000_g31776_i0reverse_frame_1 - 0.0081 14.5 2.2 0.011 14.0 2.2 1.1 1 0 0 1 1 1 1 Bacterial membrane protein YfhO FNIP PF05725.12 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_1 - 2.9e-25 88.2 7.8 2e-12 47.0 0.2 2.1 2 0 0 2 2 2 2 FNIP Repeat ShK PF01549.24 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_1 - 0.022 15.3 8.6 0.03 14.9 0.4 3.1 3 0 0 3 3 3 0 ShK domain-like Glyco_hydro_65C PF03633.15 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_1 - 0.34 10.9 0.9 34 4.4 0.0 3.4 4 0 0 4 4 4 0 Glycosyl hydrolase family 65, C-terminal domain Cas_CXXC_CXXC PF09706.10 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_1 - 0.38 11.0 2.6 47 4.3 0.0 3.1 2 1 1 3 3 3 0 CRISPR-associated protein (Cas_CXXC_CXXC) TILa PF12714.7 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_1 - 1.1 9.3 23.2 2.4 8.2 1.4 4.0 1 1 3 4 4 4 0 TILa domain PRIMA1 PF16101.5 NODE_39140_length_536_cov_2.341317_g31755_i0forward_frame_1 - 2 8.5 3.8 3.7 7.6 3.8 1.4 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Filament PF00038.21 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.00098 18.8 15.7 0.026 14.1 0.7 2.1 1 1 1 2 2 2 2 Intermediate filament protein GIT_CC PF16559.5 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.0063 16.4 1.7 0.18 11.7 1.0 2.5 2 0 0 2 2 2 1 GIT coiled-coil Rho guanine nucleotide exchange factor TolA_bind_tri PF16331.5 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.0095 16.0 8.6 0.38 10.9 0.4 3.2 1 1 2 3 3 3 2 TolA binding protein trimerisation TACC_C PF05010.14 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.046 13.5 14.8 0.059 13.1 14.8 1.2 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal KASH_CCD PF14662.6 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.053 13.3 17.8 0.5 10.2 7.4 2.2 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF1664 PF07889.12 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.14 12.2 9.3 1.5 8.8 1.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) TSC22 PF01166.18 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.14 12.5 0.5 0.14 12.5 0.5 3.8 3 2 1 4 4 4 0 TSC-22/dip/bun family HMMR_C PF15908.5 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.17 12.1 11.0 2.7 8.2 9.6 2.5 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal Cep57_CLD_2 PF14197.6 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.57 10.3 13.8 0.11 12.6 5.2 3.5 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 PRKG1_interact PF15898.5 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.73 10.8 15.8 0.046 14.6 8.3 2.3 1 1 2 3 3 3 0 cGMP-dependent protein kinase interacting domain Jnk-SapK_ap_N PF09744.9 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 0.96 9.7 15.8 1.4 9.1 14.2 1.9 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Chibby PF14645.6 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 1.1 9.7 8.1 2.4 8.6 7.6 1.9 1 1 0 1 1 1 0 Chibby family KLRAQ PF10205.9 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 1.2 9.4 13.4 1.9 8.8 9.0 2.3 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein DUF4140 PF13600.6 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 1.4 9.4 7.7 6.2 7.3 0.2 2.6 1 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) FAM76 PF16046.5 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 3.5 6.9 13.2 0.38 10.1 6.9 1.9 1 1 0 2 2 2 0 FAM76 protein Cut12 PF11500.8 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 3.6 7.5 10.7 1.5 8.8 7.9 1.8 1 1 1 2 2 2 0 Spindle pole body formation-associated protein DUF641 PF04859.12 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 3.7 7.9 12.9 6.7 7.1 6.4 2.3 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Phlebovirus_NSM PF07246.11 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 6.6 6.0 16.1 3.8e+02 0.3 16.1 2.1 1 1 0 1 1 1 0 Phlebovirus nonstructural protein NS-M UPF0242 PF06785.11 NODE_39135_length_536_cov_2.894212_g31750_i0forward_frame_1 - 6.8 6.8 20.1 25 4.9 20.1 1.8 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus 2OG-FeII_Oxy_3 PF13640.6 NODE_39116_length_536_cov_114.067864_g31732_i0reverse_frame_1 - 1.3e-12 48.5 0.0 2.2e-12 47.7 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 NODE_39116_length_536_cov_114.067864_g31732_i0reverse_frame_1 - 8.7e-12 45.6 0.0 1.6e-11 44.7 0.0 1.5 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF1700 PF08006.11 NODE_39101_length_536_cov_342.732535_g31717_i0reverse_frame_1 - 0.13 11.8 4.3 0.16 11.5 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF1251 PF06856.11 NODE_39101_length_536_cov_342.732535_g31717_i0forward_frame_1 - 0.066 12.9 0.3 0.11 12.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1251) Mem_trans PF03547.18 NODE_39092_length_536_cov_5774.876248_g31710_i0forward_frame_1 - 5e-10 38.3 8.4 5.6e-10 38.2 8.4 1.1 1 0 0 1 1 1 1 Membrane transport protein SirB PF04247.12 NODE_39092_length_536_cov_5774.876248_g31710_i0forward_frame_1 - 0.27 11.3 5.2 0.61 10.2 5.1 1.7 1 1 1 2 2 2 0 Invasion gene expression up-regulator, SirB Mem_trans PF03547.18 NODE_39091_length_536_cov_6560.371257_g31709_i0reverse_frame_1 - 6.8e-11 41.2 10.6 7.8e-11 41.0 10.6 1.1 1 0 0 1 1 1 1 Membrane transport protein SirB PF04247.12 NODE_39091_length_536_cov_6560.371257_g31709_i0reverse_frame_1 - 0.16 12.1 5.6 0.37 10.9 5.3 1.7 1 1 0 1 1 1 0 Invasion gene expression up-regulator, SirB Tnp_DNA_bind PF14706.6 NODE_39077_length_537_cov_6.834661_g31696_i0reverse_frame_1 - 0.14 12.1 0.0 0.29 11.0 0.0 1.5 1 0 0 1 1 1 0 Transposase DNA-binding Rhodanese PF00581.20 NODE_39025_length_538_cov_3.465209_g31648_i0reverse_frame_3 - 0.0024 18.4 0.0 0.0037 17.8 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain Ish1 PF10281.9 NODE_39025_length_538_cov_3.465209_g31648_i0reverse_frame_3 - 0.022 15.0 0.0 0.061 13.6 0.0 1.9 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein CBM49 PF09478.10 NODE_39024_length_538_cov_3.598410_g31647_i0forward_frame_2 - 0.13 12.6 2.9 0.77 10.1 0.1 2.7 3 0 0 3 3 3 0 Carbohydrate binding domain CBM49 Det1 PF09737.9 NODE_39021_length_538_cov_5.956262_g31644_i0forward_frame_3 - 0.055 12.5 0.0 0.073 12.1 0.0 1.1 1 0 0 1 1 1 0 De-etiolated protein 1 Det1 EGF PF00008.27 NODE_39019_length_538_cov_64.825050_g31642_i0forward_frame_2 - 0.22 11.9 2.8 0.31 11.4 1.1 2.3 2 0 0 2 2 2 0 EGF-like domain DUF5409 PF17421.2 NODE_39016_length_538_cov_77.570577_g31639_i0forward_frame_2 - 0.24 12.1 3.6 0.59 10.9 3.6 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5409) ZYG-11_interact PF05884.12 NODE_39015_length_538_cov_77.642147_g31638_i0reverse_frame_3 - 0.072 12.5 1.1 0.096 12.1 1.1 1.1 1 0 0 1 1 1 0 Interactor of ZYG-11 TAXi_N PF14543.6 NODE_39014_length_538_cov_83.045726_g31637_i0reverse_frame_2 - 1.3e-08 35.3 2.2 1.9e-08 34.7 2.2 1.3 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Spike_NTD PF16451.5 NODE_39010_length_538_cov_94.540755_g31633_i0forward_frame_3 - 0.18 11.1 3.4 0.28 10.5 3.4 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain DUF4129 PF13559.6 NODE_39009_length_538_cov_102.153082_g31632_i0reverse_frame_3 - 0.036 14.3 0.0 0.058 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4129) CRAL_TRIO PF00650.20 NODE_39009_length_538_cov_102.153082_g31632_i0forward_frame_3 - 3.4e-08 33.4 0.4 6.3e-08 32.5 0.1 1.6 2 0 0 2 2 2 1 CRAL/TRIO domain CAP_N PF01213.19 NODE_38998_length_538_cov_172.598410_g31622_i0forward_frame_3 - 4.1 6.8 14.1 6.5 6.1 14.1 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF695 PF05117.12 NODE_38973_length_539_cov_2.632937_g31602_i0reverse_frame_3 - 0.028 14.6 0.4 0.063 13.4 0.3 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF695) DUF3007 PF11460.8 NODE_38968_length_539_cov_4.158730_g31597_i0reverse_frame_3 - 0.16 12.2 0.1 0.27 11.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) CLU_N PF15044.6 NODE_38968_length_539_cov_4.158730_g31597_i0forward_frame_2 - 2.2 8.7 5.8 6.2 7.3 0.3 2.3 2 0 0 2 2 2 0 Mitochondrial function, CLU-N-term DUF2405 PF10293.9 NODE_38966_length_539_cov_64.382937_g31595_i0forward_frame_3 - 0.018 15.0 1.4 0.027 14.4 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2405) SH3_3 PF08239.11 NODE_38950_length_539_cov_143.073413_g31581_i0reverse_frame_2 - 0.0037 17.5 0.0 0.0062 16.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial SH3 domain DUF2868 PF11067.8 NODE_38950_length_539_cov_143.073413_g31581_i0reverse_frame_2 - 0.023 14.2 0.5 0.024 14.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) SH3_4 PF06347.13 NODE_38950_length_539_cov_143.073413_g31581_i0reverse_frame_2 - 0.067 13.0 0.4 0.14 12.0 0.4 1.5 1 0 0 1 1 1 0 Bacterial SH3 domain Coronavirus_5 PF05528.11 NODE_38949_length_539_cov_146.712302_g31580_i0reverse_frame_3 - 0.15 12.0 0.1 0.31 11.1 0.1 1.5 1 0 0 1 1 1 0 Coronavirus gene 5 protein Elongin_A PF06881.11 NODE_38946_length_539_cov_177.501984_g768_i4forward_frame_3 - 0.017 15.6 2.0 0.017 15.6 2.0 2.3 1 1 1 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A EF-hand_12 PF17901.1 NODE_38946_length_539_cov_177.501984_g768_i4forward_frame_3 - 0.064 13.7 1.5 0.096 13.2 0.6 1.8 1 1 0 1 1 1 0 EF-hand fold domain Ribosomal_S19e PF01090.19 NODE_38944_length_539_cov_200.279762_g6979_i2forward_frame_2 - 1.2e-45 154.6 0.1 1.7e-45 154.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 NODE_38944_length_539_cov_200.279762_g6979_i2forward_frame_2 - 0.00045 20.1 0.2 0.00072 19.4 0.2 1.3 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain Mrr_N PF14338.6 NODE_38944_length_539_cov_200.279762_g6979_i2forward_frame_2 - 0.12 12.5 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 Mrr N-terminal domain Hep_core_N PF08290.11 NODE_38942_length_539_cov_215.309524_g31575_i0reverse_frame_3 - 0.13 12.3 0.5 0.34 10.9 0.5 1.8 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger DUF2722 PF10846.8 NODE_38937_length_539_cov_316.878968_g31571_i0reverse_frame_3 - 0.027 13.4 0.0 0.042 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) DUF3915 PF13054.6 NODE_38937_length_539_cov_316.878968_g31571_i0reverse_frame_2 - 8.5 6.4 6.9 16 5.5 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3915) EF-hand_7 PF13499.6 NODE_38925_length_540_cov_2.825743_g31563_i0reverse_frame_3 - 1.7e-05 25.2 0.0 3.7e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_38925_length_540_cov_2.825743_g31563_i0reverse_frame_3 - 0.008 16.0 0.0 0.057 13.4 0.0 2.3 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 NODE_38925_length_540_cov_2.825743_g31563_i0reverse_frame_3 - 0.0085 15.6 0.0 0.032 13.8 0.0 2.0 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 NODE_38925_length_540_cov_2.825743_g31563_i0reverse_frame_3 - 0.073 12.6 0.0 0.2 11.2 0.0 1.8 1 0 0 1 1 1 0 EF hand Peptidase_M35 PF02102.15 NODE_38925_length_540_cov_2.825743_g31563_i0forward_frame_3 - 0.025 13.4 0.8 0.034 13.0 0.8 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family Pyr_redox_2 PF07992.14 NODE_38923_length_540_cov_3.184158_g31561_i0reverse_frame_3 - 2.4e-13 50.0 0.0 2.7e-13 49.8 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_38923_length_540_cov_3.184158_g31561_i0reverse_frame_3 - 1.8e-07 31.6 0.0 3.7e-07 30.6 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 NODE_38923_length_540_cov_3.184158_g31561_i0reverse_frame_3 - 0.02 14.2 0.0 0.028 13.8 0.0 1.2 1 0 0 1 1 1 0 ThiF family K_oxygenase PF13434.6 NODE_38923_length_540_cov_3.184158_g31561_i0reverse_frame_3 - 0.027 13.6 0.1 0.15 11.2 0.0 1.8 1 1 1 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DUF3369 PF11849.8 NODE_38922_length_540_cov_3.289109_g31560_i0forward_frame_3 - 0.015 15.5 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3369) PAS_7 PF12860.7 NODE_38919_length_540_cov_8.005941_g31557_i0reverse_frame_2 - 0.18 12.0 0.0 0.41 10.8 0.0 1.5 2 0 0 2 2 2 0 PAS fold PTCRA PF15028.6 NODE_38919_length_540_cov_8.005941_g31557_i0reverse_frame_2 - 0.18 11.5 1.3 14 5.4 0.1 2.5 2 1 1 3 3 3 0 Pre-T-cell antigen receptor DUF2818 PF10993.8 NODE_38912_length_540_cov_62.099010_g31550_i0reverse_frame_3 - 0.21 12.2 4.1 2.4 8.8 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2818) DUF4018 PF13210.6 NODE_38910_length_540_cov_70.334653_g31548_i0forward_frame_2 - 0.52 10.1 18.4 0.65 9.7 18.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) B3 PF02362.21 NODE_38894_length_540_cov_176.742574_g31533_i0reverse_frame_3 - 0.023 14.5 0.0 0.043 13.7 0.0 1.4 1 0 0 1 1 1 0 B3 DNA binding domain DALR_2 PF09190.11 NODE_38894_length_540_cov_176.742574_g31533_i0reverse_frame_2 - 0.046 14.2 0.0 0.093 13.2 0.0 1.4 1 0 0 1 1 1 0 DALR domain IL32 PF15225.6 NODE_38884_length_540_cov_423.158416_g31523_i1forward_frame_3 - 0.16 12.4 2.8 0.27 11.6 2.8 1.5 1 0 0 1 1 1 0 Interleukin 32 AI-2E_transport PF01594.16 NODE_38884_length_540_cov_423.158416_g31523_i1forward_frame_2 - 0.0039 16.4 0.0 0.0049 16.1 0.0 1.1 1 0 0 1 1 1 1 AI-2E family transporter Sec63 PF02889.16 NODE_38881_length_540_cov_477.378218_g31523_i0forward_frame_3 - 0.68 9.0 3.9 0.9 8.6 3.9 1.1 1 0 0 1 1 1 0 Sec63 Brl domain AI-2E_transport PF01594.16 NODE_38881_length_540_cov_477.378218_g31523_i0forward_frame_2 - 0.0032 16.7 0.0 0.004 16.4 0.0 1.1 1 0 0 1 1 1 1 AI-2E family transporter Connexin PF00029.19 ORF99216 - 0.033 13.9 1.7 0.049 13.4 1.7 1.3 1 0 0 1 1 1 0 Connexin DUF3671 PF12420.8 ORF99216 - 0.12 12.4 1.9 0.12 12.4 0.5 1.7 1 1 1 2 2 2 0 Protein of unknown function DUF4199 PF13858.6 ORF99216 - 0.23 11.9 1.2 0.32 11.4 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) Mac PF12464.8 ORF99216 - 1.2 9.4 5.4 30 5.0 1.7 3.1 2 1 0 2 2 2 0 Maltose acetyltransferase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks135.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks135.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks135.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks135.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:04:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase PF00069.25 ORF95211 - 1.6e-55 188.4 0.3 1.7e-55 188.2 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95211 - 1.3e-28 100.0 0.0 1.5e-28 99.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF95211 - 1.5e-06 27.8 0.0 2.7e-06 26.9 0.0 1.4 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF95211 - 6.6e-06 25.1 0.0 9.2e-06 24.7 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF95211 - 2.7e-05 23.3 0.2 3.2e-05 23.1 0.2 1.1 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF95211 - 0.0028 17.6 0.0 0.004 17.1 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF95211 - 0.0065 15.9 0.6 0.0088 15.4 0.1 1.4 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF95211 - 0.018 14.1 0.1 0.022 13.8 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 RIO1 PF01163.22 ORF95211 - 0.044 13.4 0.1 0.062 12.9 0.1 1.3 1 0 0 1 1 1 0 RIO1 family eIF_4G1 PF12152.8 ORF93738 - 0.0009 19.4 0.1 0.0024 18.0 0.1 1.8 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 4G1 zf-CCHC PF00098.23 ORF93482 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF93482 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF93482 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF93482 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF93482 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF93482 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle zf-CCHC PF00098.23 ORF92348 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF92348 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF92348 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF92348 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF92348 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF92348 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle GCS PF03074.16 ORF91951 - 0.11 11.8 0.1 0.14 11.6 0.1 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase SNF PF00209.18 ORF88871 - 5e-26 91.5 14.1 5.7e-26 91.3 14.1 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF4017 PF13209.6 ORF88871 - 0.024 14.5 1.9 0.024 14.5 1.9 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4017) DUF805 PF05656.14 ORF88871 - 0.044 14.2 6.7 0.26 11.7 6.7 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF805) DUF1230 PF06799.11 ORF88871 - 0.046 13.8 0.2 0.082 13.0 0.2 1.4 1 0 0 1 1 1 0 Conserved in the green lineage and diatoms 27 DUF2663 PF10864.8 ORF88871 - 0.15 12.5 3.0 0.58 10.6 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2663) SBP_bac_3 PF00497.20 ORF83041 - 4.4e-53 180.0 0.5 4.9e-53 179.9 0.5 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 ORF83041 - 3.2e-09 37.0 0.0 6.2e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 ORF83041 - 0.0025 17.8 0.6 0.006 16.6 0.5 1.7 1 1 0 1 1 1 1 NMT1/THI5 like Methyltransf_32 PF13679.6 ORF77291 - 4.2e-08 33.3 0.4 5.8e-08 32.9 0.4 1.3 1 0 0 1 1 1 1 Methyltransferase domain Homeobox_KN PF05920.11 ORF76411 - 5.6e-11 42.2 0.3 2.4e-10 40.1 0.3 2.1 2 0 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF76411 - 2e-08 34.0 0.3 3.9e-08 33.0 0.3 1.5 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF76411 - 0.0043 16.5 0.0 0.0091 15.4 0.0 1.5 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez DUF4041 PF13250.6 ORF72618 - 0.014 15.3 1.2 0.048 13.5 1.2 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) Mitoc_mL59 PF18126.1 ORF72459 - 0.0011 19.3 3.4 0.1 12.9 3.4 2.3 1 1 0 1 1 1 1 Mitochondrial ribosomal protein mL59 ubiquitin PF00240.23 ORF72 - 0.00014 21.6 0.2 0.00053 19.7 0.0 1.9 2 0 0 2 2 2 1 Ubiquitin family DUF2724 PF10893.8 ORF71338 - 0.022 14.6 0.2 0.36 10.7 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2724) Connexin PF00029.19 ORF69505 - 0.033 14.0 1.7 0.049 13.4 1.7 1.3 1 0 0 1 1 1 0 Connexin DUF3671 PF12420.8 ORF69505 - 0.13 12.3 2.4 0.11 12.6 0.6 1.7 1 1 1 2 2 2 0 Protein of unknown function DUF4199 PF13858.6 ORF69505 - 0.18 12.2 1.0 0.3 11.5 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) CTNNBL PF08216.11 ORF69505 - 0.27 11.4 5.5 0.26 11.5 3.9 1.8 1 1 1 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear Mac PF12464.8 ORF69505 - 1.2 9.4 5.4 30 5.0 1.7 3.1 2 1 0 2 2 2 0 Maltose acetyltransferase DUF3980 PF13140.6 ORF68900 - 0.48 10.9 3.6 0.56 10.7 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3980) V_ATPase_I PF01496.19 ORF66941 - 0.8 7.5 7.6 0.94 7.3 7.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DIT1_PvcA PF05141.12 ORF66941 - 1.1 8.6 5.9 1.5 8.2 5.9 1.1 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein Ribosomal_L34e PF01199.18 ORF65442 - 0.068 13.5 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein L34e COPI_assoc PF08507.10 ORF65307 - 0.88 9.6 14.9 0.11 12.6 7.3 2.1 1 1 1 2 2 2 0 COPI associated protein CTV_P6 PF06706.11 ORF65307 - 1.9 8.2 6.3 1.6 8.5 0.4 2.6 3 0 0 3 3 3 0 Citrus tristeza virus 6-kDa protein CBP_BcsG PF11658.8 ORF62481 - 0.34 9.3 4.9 0.46 8.8 4.9 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG Trp_oprn_chp PF09534.10 ORF62481 - 0.49 10.2 12.8 0.75 9.6 12.8 1.3 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF3487 PF11990.8 ORF62481 - 1.1 9.2 9.7 2.2 8.2 9.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DUF3040 PF11239.8 ORF62481 - 1.6 9.1 9.7 4.6 7.6 7.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) zf-CCHC PF00098.23 ORF61394 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF61394 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF61394 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF61394 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF61394 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF61394 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle zf-C3HC4 PF00097.25 ORF60027 - 3.4e-10 39.6 5.7 5.1e-10 39.1 5.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF60027 - 9.1e-10 38.3 4.3 1.3e-09 37.8 4.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF60027 - 1.2e-09 38.3 6.9 1.8e-09 37.8 6.9 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF60027 - 4.2e-09 36.2 5.1 6.4e-09 35.6 5.1 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF60027 - 1.4e-08 34.5 5.2 2.3e-08 33.8 5.2 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF60027 - 1.5e-08 34.4 6.2 2.4e-08 33.7 6.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF60027 - 3e-08 33.7 7.8 4.4e-08 33.1 7.8 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF60027 - 1.4e-07 31.4 7.2 2.5e-07 30.6 7.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF60027 - 6.1e-05 23.2 4.9 0.00016 21.9 4.9 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF60027 - 0.00027 20.9 0.8 0.00047 20.2 0.8 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_6 PF14835.6 ORF60027 - 0.0018 18.1 4.6 0.003 17.4 4.6 1.3 1 0 0 1 1 1 1 zf-RING of BARD1-type protein Zn_ribbon_17 PF17120.5 ORF60027 - 0.0053 16.4 6.0 0.0097 15.5 6.0 1.5 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_4 PF14570.6 ORF60027 - 0.025 14.3 3.7 0.061 13.1 3.7 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Rtf2 PF04641.12 ORF60027 - 0.026 13.9 0.4 0.034 13.5 0.4 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger zf-UDP PF14569.6 ORF60027 - 0.03 14.5 1.8 0.08 13.1 1.8 1.8 1 1 0 1 1 1 0 Zinc-binding RING-finger zf-RING_11 PF17123.5 ORF60027 - 0.067 13.0 7.2 0.17 11.7 7.2 1.7 1 1 0 1 1 1 0 RING-like zinc finger zf-RING_10 PF16685.5 ORF60027 - 0.28 11.4 6.3 0.59 10.3 6.3 1.7 1 1 0 1 1 1 0 zinc RING finger of MSL2 IBR PF01485.21 ORF60027 - 9.1 6.6 9.3 11 6.3 6.8 2.3 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain Metallophos PF00149.28 ORF58949 - 3.1e-15 57.2 0.0 4.4e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Homeobox_KN PF05920.11 ORF58521 - 5.7e-11 42.1 0.3 2.4e-10 40.1 0.3 2.1 2 0 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF58521 - 2e-08 34.0 0.3 3.9e-08 33.0 0.3 1.5 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF58521 - 0.0043 16.5 0.0 0.0091 15.4 0.0 1.5 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez P22_AR_C PF10548.9 ORF55892 - 0.056 13.6 0.0 0.14 12.4 0.0 1.7 2 0 0 2 2 2 0 P22AR C-terminal domain DUF2312 PF10073.9 ORF55892 - 0.14 11.8 1.7 4.2 7.1 0.2 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) MAP65_ASE1 PF03999.12 ORF54412 - 0.47 9.1 14.1 0.29 9.8 12.9 1.3 1 1 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) U-box PF04564.15 ORF54344 - 8.4e-08 32.3 0.1 2.2e-07 30.9 0.0 1.7 2 0 0 2 2 2 1 U-box domain zf-Nse PF11789.8 ORF54344 - 0.00084 19.1 0.0 0.02 14.7 0.0 2.3 1 1 1 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit PPDK_N PF01326.19 ORF54344 - 0.014 14.6 0.4 0.018 14.3 0.4 1.1 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RLAN PF14401.6 ORF54344 - 0.028 14.1 0.0 0.039 13.6 0.0 1.2 1 0 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain T3SS_NleG PF06416.12 ORF54344 - 0.076 12.9 0.1 0.19 11.6 0.1 1.7 1 1 0 1 1 1 0 Effector protein NleG UQ_con PF00179.26 ORF53167 - 1.2e-48 164.3 0.1 1.5e-48 164.0 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF53167 - 0.066 12.9 0.0 0.11 12.2 0.0 1.4 1 1 0 1 1 1 0 Prokaryotic E2 family B UFC1 PF08694.11 ORF53167 - 0.11 12.1 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-fold modifier-conjugating enzyme 1 Ribosomal_S14 PF00253.21 ORF52465 - 0.0036 17.0 6.0 0.9 9.4 0.2 3.4 3 0 0 3 3 3 2 Ribosomal protein S14p/S29e HXXEE PF13787.6 ORF52465 - 0.071 13.9 0.1 1.1e+02 3.7 0.0 3.4 2 1 0 4 4 4 0 Protein of unknown function with HXXEE motif zf-TAZ PF02135.16 ORF52465 - 0.082 13.4 9.8 2.6 8.6 0.1 3.8 3 1 0 3 3 3 0 TAZ zinc finger Integrase_H2C2 PF17921.1 ORF52465 - 1.1 9.4 7.2 8.4 6.6 0.1 3.5 4 0 0 4 4 4 0 Integrase zinc binding domain zf-CCHC PF00098.23 ORF49246 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF49246 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF49246 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF49246 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF49246 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF49246 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle SIS_2 PF13580.6 ORF47142 - 0.044 13.8 0.1 0.12 12.3 0.0 1.7 1 1 1 2 2 2 0 SIS domain zf-like PF04071.12 ORF46632 - 0.11 12.4 3.1 0.29 11.1 3.1 1.7 1 0 0 1 1 1 0 Cysteine-rich small domain SNF2_N PF00176.23 ORF45946 - 4.7e-09 35.4 0.0 5.3e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 ORF45946 - 0.025 14.6 0.3 0.047 13.7 0.0 1.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit zf-CCHC PF00098.23 ORF4542 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF4542 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF4542 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF4542 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF4542 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF4542 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle Colicin_M PF14859.6 ORF43882 - 0.17 10.9 0.0 0.23 10.5 0.0 1.2 1 0 0 1 1 1 0 Colicin M TIG_plexin PF17960.1 ORF43772 - 0.088 12.8 0.4 0.47 10.5 0.4 2.2 1 1 0 1 1 1 0 TIG domain CK_II_beta PF01214.18 ORF4317 - 5.6e-57 192.5 0.0 6.3e-57 192.3 0.0 1.0 1 0 0 1 1 1 1 Casein kinase II regulatory subunit CxC5 PF18718.1 ORF4317 - 0.084 13.0 0.1 0.2 11.8 0.1 1.6 1 0 0 1 1 1 0 CxC5 like cysteine cluster associated with KDZ transposases Cys_rich_KTR PF14205.6 ORF4317 - 0.23 11.3 3.0 0.42 10.4 0.5 2.2 2 0 0 2 2 2 0 Cysteine-rich KTR zf-CCHC PF00098.23 ORF42877 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF42877 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF42877 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF42877 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF42877 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF42877 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle PhyH PF05721.13 ORF4212 - 0.0036 17.6 0.0 0.0044 17.3 0.0 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Ion_trans PF00520.31 ORF41935 - 0.032 13.5 1.6 0.038 13.2 1.6 1.1 1 0 0 1 1 1 0 Ion transport protein HALZ PF02183.18 ORF41919 - 0.11 12.7 1.7 0.22 11.8 0.8 1.9 2 0 0 2 2 2 0 Homeobox associated leucine zipper BSD PF03909.17 ORF41393 - 0.14 12.2 0.2 0.23 11.5 0.2 1.4 1 0 0 1 1 1 0 BSD domain LAT PF15234.6 ORF40045 - 1.8 8.2 3.6 2.3 7.9 3.6 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells RRM_1 PF00076.22 ORF37613 - 0.00042 20.1 0.0 0.00065 19.5 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) adh_short PF00106.25 ORF34617 - 2e-17 63.3 0.0 2.7e-17 62.9 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF34617 - 1.2e-09 38.1 0.0 1.3e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase INTS5_N PF14837.6 ORF33662 - 0.02 14.5 1.4 0.023 14.3 1.4 1.1 1 0 0 1 1 1 0 Integrator complex subunit 5 N-terminus PSII_Pbs31 PF18240.1 ORF33533 - 4.7e-07 30.2 0.0 1.9e-06 28.2 0.0 2.0 2 0 0 2 2 2 1 Photosystem II Psb31 protein UCR_Fe-S_N PF10399.9 ORF33533 - 0.011 15.0 0.7 0.019 14.3 0.7 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 ORF33533 - 0.19 11.6 0.0 0.19 11.6 0.0 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence DUF1090 PF06476.12 ORF33533 - 0.39 10.8 1.8 9 6.5 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1090) DUF4491 PF14898.6 ORF32982 - 0.16 12.4 5.6 0.27 11.7 5.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) Fe-ADH PF00465.19 ORF29236 - 8.4e-11 41.3 0.2 1.3e-10 40.7 0.1 1.3 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase GlutR_N PF05201.15 ORF29236 - 0.075 12.8 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, N-terminal domain zf-CCHC PF00098.23 ORF28773 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF28773 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF28773 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF28773 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF28773 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF28773 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle GFO_IDH_MocA_C PF02894.17 ORF28609 - 0.015 15.3 0.0 0.033 14.2 0.0 1.6 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain IBR PF01485.21 ORF27729 - 5.1e-11 42.6 9.9 5.1e-11 42.6 9.9 3.2 3 0 0 3 3 3 2 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF27729 - 1.9 8.9 30.0 0.19 12.1 2.4 3.6 3 0 0 3 3 3 0 Ring finger domain zf-CCHC PF00098.23 ORF27318 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF27318 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF27318 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF27318 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF27318 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF27318 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle DUF677 PF05055.12 ORF25916 - 0.015 14.2 0.7 0.025 13.5 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF677) Filament_head PF04732.14 ORF24361 - 6 7.8 11.5 7.5 7.5 3.5 2.3 2 0 0 2 2 2 0 Intermediate filament head (DNA binding) region PSII_Pbs31 PF18240.1 ORF23659 - 4.7e-07 30.2 0.0 1.9e-06 28.2 0.0 2.0 2 0 0 2 2 2 1 Photosystem II Psb31 protein UCR_Fe-S_N PF10399.9 ORF23659 - 0.011 15.0 0.7 0.019 14.3 0.7 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 ORF23659 - 0.19 11.6 0.0 0.19 11.6 0.0 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence DUF1090 PF06476.12 ORF23659 - 0.39 10.8 1.8 9 6.5 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1090) HGTP_anticodon PF03129.20 ORF19452 - 4.6e-08 33.1 0.1 7.7e-08 32.4 0.1 1.3 1 0 0 1 1 1 1 Anticodon binding domain DNA_topoisoIV PF00521.20 ORF19006 - 0.1 11.4 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A Fucose_iso_C PF02952.17 ORF18840 - 1.3e-52 177.3 0.0 1.8e-52 176.9 0.0 1.1 1 0 0 1 1 1 1 L-fucose isomerase, C-terminal domain P66_CC PF16563.5 ORF17596 - 0.05 13.2 0.5 0.11 12.1 0.5 1.5 1 0 0 1 1 1 0 Coiled-coil and interaction region of P66A and P66B with MBD2 Glyoxalase PF00903.25 ORF15365 - 3.5e-21 75.7 0.1 1.9e-19 70.1 0.1 2.1 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF15365 - 1.3e-06 28.7 0.0 2.5e-06 27.7 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 ORF15365 - 0.00027 21.7 0.0 0.00041 21.1 0.0 1.3 1 0 0 1 1 1 1 Glyoxalase-like domain UPF0113_N PF17833.1 ORF152523 - 5.5e-30 103.8 0.4 9.6e-30 103.0 0.4 1.4 1 0 0 1 1 1 1 UPF0113 Pre-PUA domain UPF0113 PF03657.13 ORF152523 - 7.2e-25 87.1 0.0 1.2e-24 86.3 0.0 1.4 1 0 0 1 1 1 1 UPF0113 PUA domain DUF1951 PF09188.10 ORF152523 - 0.027 14.5 0.1 0.037 14.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1951) ATHILA PF03078.15 ORF151150 - 0.09 11.6 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 ATHILA ORF-1 family Synaptobrevin PF00957.21 ORF15073 - 7.1e-13 48.2 1.6 1.3e-12 47.3 1.6 1.4 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 ORF15073 - 0.0025 17.8 0.2 0.0083 16.1 0.2 1.9 1 1 0 1 1 1 1 Regulated-SNARE-like domain TA0956 PF11513.8 ORF15073 - 0.0059 16.8 0.6 0.0088 16.3 0.6 1.3 1 0 0 1 1 1 1 Thermoplasma acidophilum protein TA0956 Orf78 PF06024.12 ORF15073 - 0.0066 16.7 0.2 0.011 16.0 0.2 1.4 1 0 0 1 1 1 1 Orf78 (ac78) Herpes_US9 PF06072.11 ORF15073 - 0.0099 15.7 1.1 0.021 14.7 1.1 1.6 1 0 0 1 1 1 1 Alphaherpesvirus tegument protein US9 DUF2207 PF09972.9 ORF15073 - 0.013 14.3 4.2 0.021 13.6 4.2 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Renin_r PF07850.14 ORF15073 - 0.047 14.3 1.1 0.082 13.5 0.7 1.7 2 1 0 2 2 2 0 Renin receptor-like protein ETRAMP PF09716.10 ORF15073 - 0.15 12.1 1.7 0.62 10.2 1.7 2.1 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) SNARE PF05739.19 ORF15073 - 1.4 9.0 5.5 7.7 6.6 5.5 2.4 1 1 0 1 1 1 0 SNARE domain Pox_EPC_I2-L1 PF12575.8 ORF15073 - 5.5 7.3 8.3 0.24 11.7 0.6 2.5 2 1 1 3 3 3 0 Poxvirus entry protein complex L1 and I2 YodL PF14191.6 ORF147300 - 0.098 13.5 0.8 0.34 11.8 0.3 1.9 2 0 0 2 2 2 0 YodL-like zf-CCHC PF00098.23 ORF145612 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF145612 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF145612 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF145612 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF145612 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF145612 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle zf-CCHC PF00098.23 ORF14452 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF14452 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF14452 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF14452 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF14452 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF14452 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle NADH_4Fe-4S PF10589.9 ORF144362 - 4.9 7.3 9.5 2.7 8.2 0.2 2.4 2 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MORN PF02493.20 ORF143717 - 1.8e-33 112.4 34.2 1.8e-08 33.8 0.7 5.2 5 0 0 5 5 5 5 MORN repeat Tudor_2 PF18104.1 ORF143717 - 5.5 6.8 7.0 30 4.4 0.5 3.5 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain Trp_dioxygenase PF03301.13 ORF142783 - 0.026 13.9 5.6 0.023 14.0 3.7 1.6 1 1 1 2 2 2 0 Tryptophan 2,3-dioxygenase DUF4407 PF14362.6 ORF142783 - 0.37 10.1 5.1 0.47 9.7 5.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Ribosomal_S8e PF01201.22 ORF142783 - 6 7.0 5.9 0.59 10.3 1.6 1.5 2 0 0 2 2 2 0 Ribosomal protein S8e Peptidase_S9 PF00326.21 ORF142320 - 2.9e-09 36.7 1.3 6e-08 32.4 1.3 2.0 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF142320 - 1.1e-07 31.3 0.5 0.0011 18.3 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Esterase_phd PF10503.9 ORF142320 - 6.8e-06 25.7 0.1 9.3e-06 25.3 0.1 1.1 1 0 0 1 1 1 1 Esterase PHB depolymerase Abhydrolase_2 PF02230.16 ORF142320 - 0.00039 20.3 0.6 0.0048 16.7 0.6 1.9 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase Esterase PF00756.20 ORF142320 - 0.00084 19.1 0.0 0.001 18.8 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Abhydrolase_1 PF00561.20 ORF142320 - 0.04 13.6 0.6 0.076 12.6 0.4 1.4 1 1 0 1 1 1 0 alpha/beta hydrolase fold DLH PF01738.18 ORF142320 - 0.093 12.3 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Dienelactone hydrolase family RNase_PH PF01138.21 ORF142218 - 4.4e-25 88.7 0.0 5.4e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 DUF5638 PF18688.1 ORF141485 - 0.0096 16.2 0.6 0.017 15.4 0.6 1.5 1 1 0 1 1 1 1 Family of unknown function (DUF5638) XisH PF08814.10 ORF141485 - 0.02 15.0 0.2 0.026 14.7 0.2 1.2 1 0 0 1 1 1 0 XisH protein LETM1 PF07766.13 ORF141485 - 0.024 14.0 0.1 0.036 13.4 0.1 1.2 1 0 0 1 1 1 0 LETM1-like protein LPP20 PF02169.16 ORF141485 - 0.07 13.5 1.4 0.1 12.9 1.4 1.3 1 0 0 1 1 1 0 LPP20 lipoprotein PG_binding_1 PF01471.18 ORF141485 - 0.071 13.3 0.1 1 9.6 0.0 2.2 2 0 0 2 2 2 0 Putative peptidoglycan binding domain Synaptobrevin PF00957.21 ORF138202 - 2.9e-12 46.2 1.3 5e-12 45.5 1.3 1.4 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 ORF138202 - 0.0024 17.9 0.2 0.0083 16.1 0.2 1.9 1 1 0 1 1 1 1 Regulated-SNARE-like domain DUF2207 PF09972.9 ORF138202 - 0.004 16.0 1.6 0.0057 15.5 1.6 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) TA0956 PF11513.8 ORF138202 - 0.0058 16.8 0.6 0.0088 16.3 0.6 1.3 1 0 0 1 1 1 1 Thermoplasma acidophilum protein TA0956 Herpes_US9 PF06072.11 ORF138202 - 0.011 15.6 0.8 0.023 14.6 0.8 1.6 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 Orf78 PF06024.12 ORF138202 - 0.024 14.9 0.1 0.041 14.2 0.1 1.4 1 0 0 1 1 1 0 Orf78 (ac78) SNARE PF05739.19 ORF138202 - 0.073 13.1 0.8 0.27 11.2 0.8 2.0 1 0 0 1 1 1 0 SNARE domain Renin_r PF07850.14 ORF138202 - 0.076 13.6 1.0 0.14 12.8 0.7 1.7 2 1 0 2 2 2 0 Renin receptor-like protein ETRAMP PF09716.10 ORF138202 - 0.33 11.0 2.8 1.4 9.0 2.8 2.1 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) LysE PF01810.18 ORF135742 - 0.019 14.4 0.2 0.073 12.5 0.0 1.9 2 0 0 2 2 2 0 LysE type translocator ATE_N PF04376.13 ORF12805 - 0.12 12.8 0.1 0.22 11.9 0.1 1.4 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, N terminus 2OG-FeII_Oxy_5 PF13759.6 ORF126953 - 3.2e-11 43.5 1.1 1.4e-09 38.3 1.1 2.3 1 1 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase DUF1168 PF06658.12 ORF126711 - 0.29 10.9 1.6 0.56 10.0 1.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Paired_CXXCH_1 PF09699.10 ORF126259 - 0.19 11.5 6.6 0.29 10.9 2.2 2.6 2 1 0 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) SGL PF08450.12 ORF126080 - 7.3e-36 124.0 0.0 1.1e-35 123.4 0.0 1.2 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Sugar_tr PF00083.24 ORF12354 - 5.2e-20 71.7 12.2 5.8e-20 71.6 12.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF12354 - 0.0014 17.6 12.4 0.0095 14.9 12.4 1.9 1 1 0 1 1 1 1 Major Facilitator Superfamily RCC1_2 PF13540.6 ORF121346 - 1.7e-08 34.0 9.0 0.067 13.0 0.2 4.1 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat PLN_propep PF16485.5 ORF121346 - 0.036 13.8 2.9 0.55 10.0 0.1 3.2 4 0 0 4 4 4 0 Protealysin propeptide PheRS_DBD2 PF18554.1 ORF121346 - 8.6 6.4 22.7 14 5.7 0.8 4.3 4 0 0 4 4 4 0 PheRS DNA binding domain 2 FAM184 PF15665.5 ORF119643 - 0.00028 20.8 1.1 0.00039 20.3 1.1 1.2 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B ApoLp-III PF07464.11 ORF119643 - 0.00046 20.3 0.5 0.00075 19.6 0.5 1.4 1 0 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) 4HB_MCP_1 PF12729.7 ORF119643 - 0.003 17.1 6.6 0.033 13.8 3.8 2.4 2 1 0 2 2 2 1 Four helix bundle sensory module for signal transduction Phage_holin_3_6 PF07332.11 ORF119643 - 0.0064 16.5 0.8 0.031 14.3 0.2 1.9 2 0 0 2 2 2 1 Putative Actinobacterial Holin-X, holin superfamily III CHIP_TPR_N PF18391.1 ORF119643 - 0.0081 16.9 1.7 0.012 16.4 0.7 1.8 1 1 1 2 2 2 1 CHIP N-terminal tetratricopeptide repeat domain DUF2207 PF09972.9 ORF119643 - 0.01 14.7 0.1 0.012 14.5 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2312 PF10073.9 ORF119643 - 0.013 15.1 1.2 0.025 14.2 1.2 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) FANCI_S3 PF14677.6 ORF119643 - 0.025 14.3 1.5 0.037 13.7 1.5 1.2 1 0 0 1 1 1 0 FANCI solenoid 3 EST1 PF10374.9 ORF119643 - 0.046 14.4 1.3 7 7.3 0.2 2.3 1 1 1 2 2 2 0 Telomerase activating protein Est1 GerPC PF10737.9 ORF119643 - 0.053 13.6 0.7 0.053 13.6 0.7 2.0 1 1 1 2 2 2 0 Spore germination protein GerPC Rif1_N PF12231.8 ORF119643 - 0.09 11.8 0.5 0.11 11.4 0.5 1.1 1 0 0 1 1 1 0 Rap1-interacting factor 1 N terminal DUF3144 PF11342.8 ORF119643 - 0.63 10.4 5.3 1.9 8.8 1.6 3.0 2 1 0 3 3 3 0 Protein of unknown function (DUF3144) DUF726 PF05277.12 ORF119643 - 2.2 7.2 8.3 2.9 6.7 8.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Tmemb_170 PF10190.9 ORF119643 - 2.8 8.3 6.4 4.1 7.8 6.4 1.2 1 0 0 1 1 1 0 Putative transmembrane protein 170 MAP65_ASE1 PF03999.12 ORF118691 - 0.47 9.1 14.1 0.29 9.8 12.9 1.3 1 1 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) DUF484 PF04340.12 ORF118602 - 0.014 15.1 0.3 0.018 14.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF484 D-ser_dehydrat PF14031.6 ORF118602 - 0.096 13.4 0.1 0.14 12.8 0.1 1.4 1 1 0 1 1 1 0 Putative serine dehydratase domain SNF2_N PF00176.23 ORF113196 - 4.7e-09 35.4 0.0 5.3e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 ORF113196 - 0.025 14.6 0.3 0.047 13.7 0.0 1.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit SNF2_N PF00176.23 ORF112419 - 4.7e-09 35.4 0.0 5.3e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 ORF112419 - 0.025 14.6 0.3 0.047 13.7 0.0 1.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Nuc_sug_transp PF04142.15 ORF112041 - 4.6e-10 39.2 7.1 5.3e-10 39.0 7.1 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter CRT-like PF08627.10 ORF112041 - 0.00073 18.6 0.4 0.0009 18.3 0.4 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like EamA PF00892.20 ORF112041 - 0.0089 16.2 12.2 0.016 15.4 12.2 1.5 1 1 0 1 1 1 1 EamA-like transporter family Fumarate_red_D PF02313.17 ORF112041 - 0.092 12.9 4.6 0.16 12.1 3.8 1.9 1 1 0 1 1 1 0 Fumarate reductase subunit D Multi_Drug_Res PF00893.19 ORF112041 - 0.16 12.6 7.2 2.4 8.9 4.4 2.2 1 1 1 2 2 2 0 Small Multidrug Resistance protein adh_short PF00106.25 ORF110722 - 6.5e-12 45.3 0.0 8.8e-12 44.9 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF110722 - 2e-09 37.4 0.1 3e-09 36.8 0.1 1.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase PI3_PI4_kinase PF00454.27 ORF107246 - 3.5e-22 79.4 2.2 3.9e-22 79.3 2.2 1.0 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF5017 PF16409.5 ORF107246 - 0.096 12.2 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5017) HTH_28 PF13518.6 ORF106782 - 1.6e-21 76.2 1.1 8.4e-10 38.6 0.3 2.5 3 0 0 3 3 3 2 Helix-turn-helix domain HTH_29 PF13551.6 ORF106782 - 5.6e-10 39.1 0.1 0.00091 19.2 0.0 2.3 2 0 0 2 2 2 2 Winged helix-turn helix HTH_23 PF13384.6 ORF106782 - 5.3e-09 35.6 1.2 3.6e-05 23.4 0.0 3.0 2 1 0 2 2 2 2 Homeodomain-like domain HTH_32 PF13565.6 ORF106782 - 7.1e-08 33.0 0.1 0.0062 17.1 0.0 2.3 2 0 0 2 2 2 2 Homeodomain-like domain DUF1153 PF06627.11 ORF106782 - 1.4e-05 25.2 0.1 0.0029 17.7 0.1 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1153) HTH_Tnp_1 PF01527.20 ORF106782 - 0.00059 20.1 1.5 0.0022 18.3 0.0 2.5 2 1 1 3 3 3 1 Transposase DUF4817 PF16087.5 ORF106782 - 0.016 15.0 0.3 13 5.7 0.2 3.7 3 1 0 3 3 3 0 Helix-turn-helix domain (DUF4817) DUF1804 PF08822.11 ORF106782 - 0.11 12.5 0.4 5.3 7.0 0.0 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1804) BrkDBD PF09607.10 ORF106782 - 0.15 11.9 0.0 0.67 9.8 0.0 2.0 2 0 0 2 2 2 0 Brinker DNA-binding domain TPKR_C2 PF16920.5 ORF106782 - 0.26 11.5 0.1 1.1 9.4 0.0 1.9 2 0 0 2 2 2 0 Tyrosine-protein kinase receptor C2 Ig-like domain P66_CC PF16563.5 ORF106782 - 1 9.0 4.8 2.3 7.9 4.8 1.6 1 0 0 1 1 1 0 Coiled-coil and interaction region of P66A and P66B with MBD2 Chitin_synth_2 PF03142.15 ORF105580 - 2 6.9 4.1 0.58 8.7 1.4 1.4 2 0 0 2 2 2 0 Chitin synthase SWIM PF04434.17 ORF104609 - 2 8.1 13.1 3.8 7.3 0.1 3.3 3 1 0 3 3 3 0 SWIM zinc finger TMEM132D_C PF15706.5 ORF104361 - 0.1 12.4 1.1 0.27 11.0 0.8 1.9 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF2070 PF09843.9 ORF104361 - 1.5 7.0 9.7 1.7 6.8 9.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Baculo_11_kDa PF06143.11 ORF104361 - 4.9 6.8 10.1 2.6 7.7 7.3 1.9 2 0 0 2 2 2 0 Baculovirus 11 kDa family Pkinase PF00069.25 ORF102071 - 4.2e-23 82.1 0.0 5.1e-23 81.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF102071 - 8.6e-06 25.2 0.0 1.3e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Sigma70_r2 PF04542.14 ORF102071 - 0.16 11.7 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 region 2 zf-CCHC PF00098.23 ORF101310 - 2.5e-07 30.5 10.5 0.002 18.1 2.7 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF101310 - 3e-05 23.7 5.5 0.0056 16.4 0.6 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-C2H2_10 PF16588.5 ORF101310 - 0.0066 16.1 10.0 0.19 11.5 1.6 2.6 2 0 0 2 2 2 2 C2H2 zinc-finger DnaJ_CXXCXGXG PF00684.19 ORF101310 - 0.012 15.9 5.0 0.024 15.0 5.0 1.5 1 0 0 1 1 1 0 DnaJ central domain DUF4145 PF13643.6 ORF101310 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) zf-CCHC_2 PF13696.6 ORF101310 - 1 9.3 10.8 1.2 9.0 2.1 3.0 3 0 0 3 3 3 0 Zinc knuckle RPN6_C_helix PF18503.1 ORF101170 - 0.029 14.1 0.2 3.3 7.5 0.1 2.4 2 0 0 2 2 2 0 26S proteasome subunit RPN6 C-terminal helix domain GGDEF PF00990.21 ORF100571 - 9.2e-47 158.8 0.0 1.1e-46 158.5 0.0 1.1 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 ORF100571 - 0.0014 18.8 0.1 0.004 17.4 0.0 1.7 1 1 1 2 2 2 1 GGDEF-like domain Amnionless PF14828.6 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.047 12.5 2.4 0.069 12.0 2.4 1.3 1 0 0 1 1 1 0 Amnionless Wzy_C PF04932.15 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.071 12.7 1.3 0.078 12.6 1.3 1.3 1 0 0 1 1 1 0 O-Antigen ligase FA_desaturase PF00487.24 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.4 10.5 2.6 0.47 10.2 2.6 1.2 1 0 0 1 1 1 0 Fatty acid desaturase DUF1700 PF08006.11 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.42 10.1 12.1 0.56 9.7 12.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) SSP160 PF06933.11 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 0.75 7.9 14.6 1 7.5 14.6 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Promethin PF16015.5 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 1.6 8.7 22.4 3.1 7.8 22.4 1.4 1 0 0 1 1 1 0 Promethin DUF2207 PF09972.9 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 3.4 6.3 7.5 4.2 6.0 7.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Trp_oprn_chp PF09534.10 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_1 - 6.9 6.4 18.1 9.8 5.9 18.1 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) RCC1_2 PF13540.6 NODE_39371_length_532_cov_51.937626_g31972_i0reverse_frame_1 - 4.6e-09 35.8 1.8 0.018 14.8 0.0 3.7 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 NODE_39371_length_532_cov_51.937626_g31972_i0reverse_frame_1 - 0.0051 16.7 2.1 2.9 7.8 0.1 2.9 1 1 2 3 3 3 2 Lipocalin / cytosolic fatty-acid binding protein family DUF155 PF02582.14 NODE_39371_length_532_cov_51.937626_g31972_i0reverse_frame_1 - 0.12 12.5 0.0 6.4 6.8 0.0 2.7 3 0 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Bac_globin PF01152.21 NODE_39371_length_532_cov_51.937626_g31972_i0forward_frame_1 - 0.11 12.7 0.2 0.23 11.6 0.2 1.5 1 0 0 1 1 1 0 Bacterial-like globin PfkB PF00294.24 NODE_39349_length_532_cov_216.259557_g31951_i0reverse_frame_1 - 1.3e-09 37.8 0.4 4.6e-09 36.0 0.4 1.7 1 1 0 1 1 1 1 pfkB family carbohydrate kinase SPATA25 PF15218.6 NODE_39332_length_533_cov_1.971888_g31936_i0reverse_frame_1 - 0.02 14.7 1.5 0.031 14.0 1.5 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 25 Prim_Zn_Ribbon PF08273.12 NODE_39332_length_533_cov_1.971888_g31936_i0reverse_frame_1 - 0.13 12.6 4.4 2 8.8 0.5 2.6 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase p12I PF12233.8 NODE_39330_length_533_cov_1.995984_g31934_i0reverse_frame_1 - 0.34 11.4 7.3 0.42 11.2 6.4 1.5 1 1 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein Mit_KHE1 PF10173.9 NODE_39330_length_533_cov_1.995984_g31934_i0forward_frame_1 - 0.11 12.6 5.4 0.14 12.2 5.4 1.2 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related GPHH PF16905.5 NODE_39321_length_533_cov_2.855422_g31925_i0reverse_frame_1 - 0.019 14.7 0.2 0.05 13.4 0.2 1.7 1 0 0 1 1 1 0 Voltage-dependent L-type calcium channel, IQ-associated CLIP_SPH_mas PF18398.1 NODE_39321_length_533_cov_2.855422_g31925_i0reverse_frame_1 - 0.092 13.2 0.6 0.092 13.2 0.6 2.8 3 0 0 3 3 3 0 Clip-domain serine protease homolog masquerade zf-UDP PF14569.6 NODE_39320_length_533_cov_2.935743_g31924_i0forward_frame_1 - 0.054 13.6 2.7 0.17 12.0 2.5 2.0 1 1 1 2 2 2 0 Zinc-binding RING-finger Zn_Tnp_IS1595 PF12760.7 NODE_39320_length_533_cov_2.935743_g31924_i0forward_frame_1 - 4.1 7.5 9.7 4 7.5 1.8 2.5 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF829 PF05705.14 NODE_39319_length_533_cov_3.124498_g31923_i0reverse_frame_1 - 0.006 16.5 0.4 0.0086 16.0 0.4 1.2 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF829) PEX11 PF05648.14 NODE_39319_length_533_cov_3.124498_g31923_i0forward_frame_1 - 1.2e-06 28.2 0.9 1.2e-06 28.2 0.9 1.9 1 1 1 2 2 2 1 Peroxisomal biogenesis factor 11 (PEX11) G0-G1_switch_2 PF15103.6 NODE_39319_length_533_cov_3.124498_g31923_i0forward_frame_1 - 0.029 14.8 1.0 0.12 12.8 0.9 1.8 1 1 1 2 2 2 0 G0/G1 switch protein 2 YafO_toxin PF13957.6 NODE_39317_length_533_cov_3.578313_g31921_i0reverse_frame_1 - 3e-27 94.6 0.0 3.9e-27 94.2 0.0 1.2 1 0 0 1 1 1 1 Toxin YafO, type II toxin-antitoxin system TauE PF01925.19 NODE_39316_length_533_cov_3.688755_g31920_i0forward_frame_1 - 5.8e-09 35.9 0.0 7.1e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE MscL PF01741.18 NODE_39316_length_533_cov_3.688755_g31920_i0forward_frame_1 - 0.034 14.4 0.1 0.065 13.5 0.1 1.6 1 1 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL Med13_C PF06333.12 NODE_39309_length_533_cov_42.710843_g31913_i0forward_frame_1 - 0.47 9.7 2.5 0.52 9.5 2.5 1.2 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain Ion_trans PF00520.31 NODE_39306_length_533_cov_58.783133_g31910_i0forward_frame_1 - 2.4e-18 66.3 16.1 2.8e-18 66.1 16.1 1.0 1 0 0 1 1 1 1 Ion transport protein zf-CCCH PF00642.24 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 8.7e-20 70.1 15.3 4e-11 42.5 4.7 2.2 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 9.7e-11 41.4 17.1 2.5e-07 30.5 5.2 2.3 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_2 PF14608.6 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 5.3e-08 33.0 13.5 0.00028 21.2 3.7 2.3 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger zf-CCCH_4 PF18044.1 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 2.5e-07 30.3 12.5 4.3e-07 29.6 3.6 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 3e-05 24.7 1.1 0.14 12.8 0.1 2.3 2 0 0 2 2 2 2 Torus domain zf-CCCH_3 PF15663.5 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 0.0055 16.9 0.6 0.27 11.5 0.1 2.3 2 0 0 2 2 2 1 Zinc-finger containing family oligo_HPY PF08352.12 NODE_39262_length_534_cov_2.486974_g31870_i0reverse_frame_1 - 0.18 12.4 1.6 3.1 8.4 0.1 2.3 2 0 0 2 2 2 0 Oligopeptide/dipeptide transporter, C-terminal region FixQ PF05545.11 NODE_39262_length_534_cov_2.486974_g31870_i0forward_frame_1 - 0.16 12.0 0.5 0.16 12.0 0.5 2.2 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ DUF4575 PF15143.6 NODE_39260_length_534_cov_2.637275_g31868_i0reverse_frame_1 - 0.018 15.3 2.5 0.018 15.3 2.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4575) PTS_EIIA_2 PF00359.22 NODE_39252_length_534_cov_3.326653_g31860_i0reverse_frame_1 - 3.7e-20 72.3 0.0 6.5e-20 71.5 0.0 1.4 1 1 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GntR PF00392.21 NODE_39252_length_534_cov_3.326653_g31860_i0forward_frame_1 - 0.0012 18.5 0.1 0.0023 17.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FUSC_2 PF13515.6 NODE_39252_length_534_cov_3.326653_g31860_i0forward_frame_1 - 0.1 12.7 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein-like Kelch_3 PF13415.6 NODE_39250_length_534_cov_3.599198_g31858_i0reverse_frame_1 - 0.14 12.5 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Galactose oxidase, central domain SBP_bac_5 PF00496.22 NODE_39250_length_534_cov_3.599198_g31858_i0forward_frame_1 - 1.1e-42 146.4 0.1 1.2e-42 146.2 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Ank_4 PF13637.6 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.006 17.1 0.0 0.016 15.8 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.036 14.6 0.2 0.5 11.0 0.2 2.4 1 1 1 2 2 2 0 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.086 13.2 0.0 0.58 10.5 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Mrpl_C PF18502.1 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.15 12.3 3.3 0.062 13.6 0.7 1.7 2 0 0 2 2 2 0 54S ribosomal protein L8 C-terminal domain DUF5123 PF17161.4 NODE_39245_length_534_cov_72.370741_g31853_i0forward_frame_1 - 0.28 12.3 6.9 1.6 9.9 5.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5123) zf-RING_4 PF14570.6 NODE_39198_length_535_cov_3.130000_g31811_i0forward_frame_2 - 0.21 11.4 2.3 7.3 6.5 0.1 2.3 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Peptidase_M14 PF00246.24 NODE_39193_length_535_cov_4.492000_g31806_i0forward_frame_2 - 9.3e-16 58.5 0.0 1.5e-15 57.8 0.0 1.3 1 0 0 1 1 1 1 Zinc carboxypeptidase Oxidored_q5_N PF01059.17 NODE_39192_length_535_cov_4.996000_g31805_i0forward_frame_3 - 0.88 9.7 0.0 0.88 9.7 0.0 3.1 2 1 0 3 3 3 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Wyosine_form PF08608.12 NODE_39190_length_535_cov_7.142000_g31803_i0reverse_frame_3 - 0.11 12.8 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 Wyosine base formation Orai-1 PF07856.12 NODE_39175_length_535_cov_94.002000_g31788_i0forward_frame_2 - 0.016 14.9 0.9 0.026 14.2 0.9 1.5 1 1 0 1 1 1 0 Mediator of CRAC channel activity DoxX_2 PF13564.6 NODE_39175_length_535_cov_94.002000_g31788_i0forward_frame_2 - 0.039 14.0 0.0 0.067 13.3 0.0 1.4 1 0 0 1 1 1 0 DoxX-like family Pox_RNA_pol PF03293.14 NODE_39174_length_535_cov_95.394000_g31787_i0reverse_frame_3 - 0.13 11.9 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 18 kD subunit RAP1 PF07218.11 NODE_39174_length_535_cov_95.394000_g31787_i0reverse_frame_2 - 0.19 10.0 2.0 0.23 9.7 2.0 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) TT_ORF1 PF02956.14 NODE_39174_length_535_cov_95.394000_g31787_i0forward_frame_3 - 5.5 5.5 17.4 7.7 5.1 17.4 1.3 1 0 0 1 1 1 0 TT viral orf 1 WD40_like PF17005.5 NODE_39165_length_535_cov_164.812000_g31779_i0reverse_frame_3 - 0.00039 19.9 6.5 0.11 11.8 0.1 2.0 1 1 1 2 2 2 2 WD40-like domain BBS2_Mid PF14783.6 NODE_39165_length_535_cov_164.812000_g31779_i0reverse_frame_3 - 0.0074 16.3 0.7 0.065 13.3 0.5 2.0 1 1 1 2 2 2 1 Ciliary BBSome complex subunit 2, middle region Vps16_N PF04841.13 NODE_39165_length_535_cov_164.812000_g31779_i0reverse_frame_3 - 0.013 14.3 0.1 0.014 14.1 0.1 1.1 1 0 0 1 1 1 0 Vps16, N-terminal region HPS3_N PF14761.6 NODE_39165_length_535_cov_164.812000_g31779_i0reverse_frame_3 - 0.029 13.9 0.2 0.055 13.0 0.2 1.5 1 1 0 1 1 1 0 Hermansky-Pudlak syndrome 3 OrfA PF17495.2 NODE_39165_length_535_cov_164.812000_g31779_i0reverse_frame_3 - 0.052 13.7 0.2 0.087 13.0 0.2 1.4 1 0 0 1 1 1 0 Vpr-like OrfA Adipogenin PF15202.6 NODE_39162_length_535_cov_179.622000_g31776_i0reverse_frame_3 - 0.012 15.6 0.3 0.037 14.1 0.3 1.8 1 0 0 1 1 1 0 Adipogenin Anthrax-tox_M PF09156.10 NODE_39161_length_535_cov_208.480000_g31775_i0forward_frame_3 - 0.037 13.4 0.0 0.053 12.9 0.0 1.2 1 0 0 1 1 1 0 Anthrax toxin lethal factor, middle domain PITH PF06201.13 NODE_39159_length_535_cov_230.814000_g31773_i0forward_frame_2 - 2.3e-24 86.4 0.0 3e-24 85.9 0.0 1.2 1 0 0 1 1 1 1 PITH domain FNIP PF05725.12 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_3 - 2.3e-37 126.9 22.0 1e-12 48.0 0.5 2.9 1 1 3 4 4 4 4 FNIP Repeat LRR_5 PF13306.6 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_3 - 0.0009 19.2 0.1 0.0013 18.7 0.1 1.2 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) Glyco_hydro_65C PF03633.15 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_3 - 0.14 12.1 1.5 95 3.0 0.0 4.0 4 0 0 4 4 4 0 Glycosyl hydrolase family 65, C-terminal domain LRR_11 PF18831.1 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_3 - 4.4 7.0 13.1 30 4.3 0.1 4.3 4 0 0 4 4 4 0 Leucine-rich repeat DUF983 PF06170.12 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_2 - 0.12 12.8 3.7 2.4 8.6 0.3 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF983) GSu_C4xC__C2xCH PF09698.10 NODE_39155_length_535_cov_319.092000_g31769_i0reverse_frame_2 - 0.19 12.5 11.1 9.9 7.0 0.2 4.4 4 0 0 4 4 4 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) HalX PF08663.10 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_3 - 0.047 14.0 4.1 1.2 9.5 0.3 2.6 2 1 0 2 2 2 0 HalX domain DUF1018 PF06252.12 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_3 - 0.077 14.0 0.4 0.12 13.4 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1018) TOH_N PF12549.8 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_2 - 0.073 12.9 0.5 4.7 7.2 0.0 3.2 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal HalX PF08663.10 NODE_39155_length_535_cov_319.092000_g31769_i0forward_frame_2 - 0.24 11.8 7.2 5.1 7.5 0.1 3.2 4 0 0 4 4 4 0 HalX domain Fn3-like PF14310.6 NODE_39144_length_535_cov_46505.400000_g31759_i0reverse_frame_2 - 2.4e-08 34.0 0.0 4e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 Fibronectin type III-like domain PTPRCAP PF15713.5 NODE_39140_length_536_cov_2.341317_g31755_i0reverse_frame_3 - 0.085 13.1 3.3 0.13 12.5 3.3 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated DUF5581 PF17744.1 NODE_39138_length_536_cov_2.616766_g31753_i0reverse_frame_3 - 0.07 12.5 0.0 0.086 12.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5581) DUF1229 PF06797.11 NODE_39138_length_536_cov_2.616766_g31753_i0forward_frame_2 - 0.095 12.9 3.9 0.035 14.3 1.5 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1229) Gemini_mov PF01708.16 NODE_39137_length_536_cov_2.668663_g31752_i0reverse_frame_3 - 0.53 10.1 2.5 0.51 10.1 1.2 1.6 1 1 0 1 1 1 0 Geminivirus putative movement protein PCO_ADO PF07847.12 NODE_39137_length_536_cov_2.668663_g31752_i0reverse_frame_2 - 0.00033 20.1 0.0 0.00042 19.8 0.0 1.2 1 0 0 1 1 1 1 PCO_ADO Sigma_reg_C PF13791.6 NODE_39111_length_536_cov_197.992016_g31727_i0reverse_frame_3 - 0.031 14.5 0.5 0.044 14.0 0.5 1.2 1 0 0 1 1 1 0 Sigma factor regulator C-terminal SAYSvFN PF10260.9 NODE_39105_length_536_cov_249.323353_g31721_i0forward_frame_3 - 5.4e-14 51.9 0.0 8.7e-14 51.2 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved domain (SAYSvFN) SEC-C PF02810.15 NODE_39105_length_536_cov_249.323353_g31721_i0forward_frame_3 - 2.5e-06 27.3 7.9 4e-06 26.6 7.9 1.4 1 0 0 1 1 1 1 SEC-C motif YabA PF06156.13 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.0062 17.1 2.8 0.011 16.4 2.7 1.5 1 1 0 1 1 1 1 Initiation control protein YabA MIB_HERC2 PF06701.13 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.009 16.2 0.8 0.017 15.3 0.8 1.5 1 0 0 1 1 1 1 Mib_herc2 RNA_pol_Rpa2_4 PF06883.12 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.009 16.0 0.0 0.025 14.6 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase I, Rpa2 specific domain Plexin_cytopl PF08337.12 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.064 11.9 0.3 0.075 11.7 0.3 1.0 1 0 0 1 1 1 0 Plexin cytoplasmic RasGAP domain DUF3452 PF11934.8 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.073 12.6 0.4 0.11 12.1 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) Ax_dynein_light PF10211.9 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.15 12.0 6.0 0.2 11.6 6.0 1.3 1 0 0 1 1 1 0 Axonemal dynein light chain DivIC PF04977.15 NODE_39102_length_536_cov_300.688623_g31718_i0reverse_frame_2 - 0.49 10.2 5.6 0.61 9.9 4.5 1.8 1 1 1 2 2 2 0 Septum formation initiator Lantibiotic_a PF14867.6 NODE_39092_length_536_cov_5774.876248_g31710_i0forward_frame_3 - 0.14 12.0 0.9 0.33 10.7 0.9 1.6 1 0 0 1 1 1 0 Lantibiotic alpha Lantibiotic_a PF14867.6 NODE_39091_length_536_cov_6560.371257_g31709_i0reverse_frame_3 - 0.14 11.9 0.9 0.33 10.7 0.9 1.6 1 0 0 1 1 1 0 Lantibiotic alpha DUF3091 PF11291.8 NODE_39087_length_537_cov_2.105578_g31705_i0reverse_frame_3 - 0.15 12.3 0.1 0.23 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) MFS_1 PF07690.16 NODE_39087_length_537_cov_2.105578_g31705_i0reverse_frame_2 - 0.0089 15.0 0.1 0.0092 14.9 0.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily ABC_tran PF00005.27 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 1.3e-18 67.8 2.3 1.7e-09 38.3 0.0 2.4 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 2.5e-05 24.7 0.1 4e-05 24.1 0.1 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 0.0005 19.6 1.5 0.0041 16.6 0.1 2.0 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 0.0011 18.9 4.0 0.002 18.0 0.2 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 0.025 14.3 0.3 0.062 13.0 0.3 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 NODE_39083_length_537_cov_3.569721_g31701_i0reverse_frame_3 - 1.8 8.8 4.2 6.2 7.1 0.9 2.2 2 0 0 2 2 2 0 AAA domain Speriolin_N PF15058.6 NODE_39083_length_537_cov_3.569721_g31701_i0forward_frame_3 - 0.094 12.8 1.3 0.11 12.6 1.1 1.3 1 1 0 1 1 1 0 Speriolin N terminus SAP PF02037.27 NODE_39078_length_537_cov_5.049801_g24172_i3reverse_frame_2 - 0.002 17.8 1.0 0.0032 17.2 1.0 1.3 1 0 0 1 1 1 1 SAP domain Arm_vescicular PF18770.1 NODE_39077_length_537_cov_6.834661_g31696_i0reverse_frame_2 - 0.1 12.5 0.2 0.4 10.7 0.0 2.0 2 0 0 2 2 2 0 Armadillo tether-repeat of vescicular transport factor # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks136.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks136.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks136.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks136.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:02:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HNH_3 PF13392.6 NODE_39068_length_537_cov_84.731076_g31687_i0forward_frame_2 - 0.018 14.8 1.7 0.07 12.9 1.7 1.9 1 1 0 1 1 1 0 HNH endonuclease Glyco_trans_1_4 PF13692.6 NODE_39062_length_537_cov_120.484064_g31681_i0reverse_frame_2 - 0.014 15.8 0.2 0.023 15.1 0.2 1.3 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF2374 PF09574.10 NODE_39055_length_537_cov_186.645418_g31675_i0forward_frame_3 - 0.0083 15.9 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (Duf2374) X PF00739.19 NODE_39039_length_537_cov_571.294821_g31660_i0reverse_frame_2 - 0.019 15.1 0.0 0.028 14.6 0.0 1.2 1 0 0 1 1 1 0 Trans-activation protein X WD40 PF00400.32 ORF99675 - 2.3e-16 59.8 3.5 3.2e-07 30.9 0.6 4.0 4 0 0 4 4 4 2 WD domain, G-beta repeat WD40_like PF17005.5 ORF99675 - 0.00028 20.3 0.1 0.00036 20.0 0.1 1.1 1 0 0 1 1 1 1 WD40-like domain ANAPC4_WD40 PF12894.7 ORF99675 - 0.0036 17.6 0.1 0.059 13.7 0.0 2.3 1 1 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain PQQ_3 PF13570.6 ORF99675 - 0.0059 17.0 0.0 8 7.1 0.0 3.5 4 0 0 4 4 4 1 PQQ-like domain PQQ PF01011.21 ORF99675 - 0.13 12.2 0.0 5.8 7.0 0.0 2.9 3 0 0 3 3 3 0 PQQ enzyme repeat Spem1 PF15670.5 ORF99115 - 3.5 7.1 7.5 0.15 11.6 2.2 1.4 2 0 0 2 2 2 0 Spermatid maturation protein 1 DUF447 PF04289.12 ORF97943 - 0.027 14.2 0.1 0.12 12.1 0.0 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF447) TPK_catalytic PF04263.16 ORF97943 - 0.053 13.6 1.7 0.061 13.4 1.7 1.3 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain Zn_Tnp_IS1 PF03811.13 ORF97429 - 0.78 9.5 5.2 28 4.5 0.0 3.3 3 0 0 3 3 3 0 InsA N-terminal domain LysM PF01476.20 ORF97221 - 5.6e-06 26.3 0.0 1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 LysM domain UPF0020 PF01170.18 ORF97221 - 0.0096 15.6 0.1 0.014 15.1 0.1 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 UBA_4 PF14555.6 ORF97221 - 0.031 14.1 0.0 0.056 13.3 0.0 1.4 1 0 0 1 1 1 0 UBA-like domain DUF4875 PF16175.5 ORF93628 - 0.067 13.3 0.1 0.086 13.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4875) KH_dom-like PF14714.6 ORF93239 - 0.039 14.3 0.1 0.064 13.6 0.1 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IMUP PF15761.5 ORF93239 - 3.4 8.4 8.3 5.5 7.7 8.3 1.3 1 0 0 1 1 1 0 Immortalisation up-regulated protein TPR_7 PF13176.6 ORF93125 - 4.9e-05 23.1 0.1 1.3 9.2 0.1 3.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF93125 - 7.1e-05 23.0 0.3 0.044 14.1 0.4 2.9 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF93125 - 0.0015 18.6 0.6 2.9 8.3 0.1 3.7 3 1 2 5 5 5 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF93125 - 0.017 15.7 0.0 11 6.9 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF93125 - 0.043 13.9 0.2 1.5 8.9 0.1 2.2 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 5 TPR_14 PF13428.6 ORF93125 - 0.073 13.9 0.0 8.9 7.4 0.1 2.9 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF93125 - 0.15 12.2 2.4 33 4.9 0.0 3.8 3 1 2 5 5 5 0 Tetratricopeptide repeat REV1_C PF16727.5 ORF93125 - 0.18 12.2 0.0 0.29 11.6 0.0 1.5 1 0 0 1 1 1 0 DNA repair protein REV1 C-terminal domain TPR_1 PF00515.28 ORF93125 - 0.25 11.2 3.3 15 5.6 0.0 3.7 3 1 2 5 5 5 0 Tetratricopeptide repeat Tetraspanin PF00335.20 ORF91021 - 4.4e-05 23.3 7.8 6.1e-05 22.8 7.8 1.2 1 0 0 1 1 1 1 Tetraspanin family Phage_holin_3_6 PF07332.11 ORF91021 - 0.062 13.3 0.6 0.062 13.3 0.6 2.2 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4231 PF14015.6 ORF91021 - 5.1 7.6 9.7 0.31 11.5 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) DUF1642 PF07852.11 ORF90687 - 0.2 12.3 3.5 0.41 11.2 3.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1642) Mob_synth_C PF06463.13 ORF90660 - 0.12 12.3 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C Papo_T_antigen PF02380.15 ORF89562 - 0.23 11.6 6.5 0.057 13.6 3.1 1.9 2 0 0 2 2 2 0 T-antigen specific domain LMBR1 PF04791.16 ORF89562 - 3.4 6.5 6.7 2.1 7.2 5.5 1.2 1 1 0 1 1 1 0 LMBR1-like membrane protein HAP1_N PF04849.13 ORF84823 - 0.0017 17.7 2.0 0.0017 17.7 2.0 2.0 2 0 0 2 2 2 1 HAP1 N-terminal conserved region APG6_N PF17675.1 ORF84823 - 0.081 13.5 10.9 0.032 14.8 4.5 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region Fungal_TACC PF12709.7 ORF84823 - 0.093 13.2 1.0 0.093 13.2 1.0 3.0 2 1 1 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF1204 PF06721.11 ORF84823 - 0.15 11.4 5.3 0.083 12.3 3.4 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1204) GED PF02212.18 ORF84823 - 0.38 10.9 8.3 2.8 8.2 0.6 3.0 3 0 0 3 3 3 0 Dynamin GTPase effector domain DUF1664 PF07889.12 ORF84823 - 0.58 10.2 9.3 0.13 12.3 0.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) DUF4201 PF13870.6 ORF84823 - 1.1 8.9 21.1 0.21 11.3 10.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) YabA PF06156.13 ORF84823 - 5 7.8 10.5 13 6.5 3.7 2.8 2 1 0 2 2 2 0 Initiation control protein YabA bZIP_1 PF00170.21 ORF84823 - 8 6.6 14.6 1.8 8.7 0.6 3.3 2 1 1 3 3 3 0 bZIP transcription factor THEG PF14912.6 ORF83489 - 0.01 16.2 0.1 0.027 14.9 0.1 1.8 1 0 0 1 1 1 0 Testicular haploid expressed repeat Peptidase_M20 PF01546.28 ORF8333 - 1.6e-07 31.2 0.0 2.8e-07 30.4 0.0 1.5 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF8333 - 0.00011 22.1 0.0 0.0002 21.2 0.0 1.5 2 0 0 2 2 2 1 Peptidase dimerisation domain Alba PF01918.21 ORF8333 - 0.051 13.4 0.0 0.065 13.1 0.0 1.4 1 1 0 1 1 1 0 Alba BRD4_CDT PF17105.5 ORF81281 - 1.5 8.5 3.8 22 4.7 0.9 2.6 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 Sugar_tr PF00083.24 ORF80634 - 8.8e-21 74.3 11.8 9.8e-21 74.1 11.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF80634 - 0.006 15.6 13.9 1 8.2 0.7 1.8 1 1 0 1 1 1 1 Major Facilitator Superfamily Cyclin PF08613.11 ORF80201 - 3e-16 60.2 0.7 4.4e-16 59.7 0.7 1.3 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF80201 - 0.00044 20.0 1.0 0.0011 18.7 0.0 1.8 2 0 0 2 2 2 1 Cyclin, N-terminal domain PSI_8 PF00796.18 ORF79746 - 1.5e-05 24.7 6.5 1.5e-05 24.7 6.5 2.5 3 0 0 3 3 3 1 Photosystem I reaction centre subunit VIII CCDC32 PF14989.6 ORF79746 - 0.11 12.5 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing 32 Pkinase PF00069.25 ORF78965 - 3.5e-18 65.9 1.8 4.2e-18 65.7 0.0 1.8 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78965 - 4.6e-08 32.7 0.0 6e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF78965 - 0.051 13.2 0.1 0.069 12.8 0.1 1.3 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 MerR PF00376.23 ORF74670 - 0.05 13.4 0.0 0.099 12.4 0.0 1.4 1 0 0 1 1 1 0 MerR family regulatory protein DUF4407 PF14362.6 ORF73108 - 2.5 7.4 8.5 5 6.4 8.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TetR_C_1 PF02909.17 ORF72315 - 0.013 15.4 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF4407 PF14362.6 ORF72219 - 2.5 7.4 8.5 5 6.4 8.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Poxvirus_B22R PF04395.12 ORF71538 - 0.00079 19.0 3.9 0.00079 19.0 3.9 1.4 2 0 0 2 2 2 1 Poxvirus B22R protein CCDC-167 PF15188.6 ORF71538 - 0.52 10.7 4.1 9.6 6.6 0.0 3.0 2 1 1 3 3 3 0 Coiled-coil domain-containing protein 167 Presenilin PF01080.17 ORF70986 - 0.13 11.0 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 Presenilin Aa_trans PF01490.18 ORF69127 - 1.2e-11 43.9 13.6 1.5e-11 43.7 13.6 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein cNMP_binding PF00027.29 ORF6859 - 6.3e-07 29.4 0.0 0.0063 16.6 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain LSM PF01423.22 ORF68394 - 0.031 14.0 0.8 0.3 10.8 0.2 2.5 2 0 0 2 2 2 0 LSM domain SIP1 PF04938.12 ORF67891 - 0.042 13.5 4.1 0.048 13.4 4.1 1.2 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) DUF3086 PF11285.8 ORF67891 - 0.17 10.9 1.5 0.24 10.5 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) TetR_C_22 PF17928.1 ORF67891 - 0.21 11.9 0.0 0.35 11.2 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain IlvC PF01450.19 ORF67891 - 0.28 11.5 3.0 0.24 11.7 1.3 1.7 1 1 1 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain Folate_carrier PF01770.18 ORF67891 - 0.77 8.4 2.6 0.92 8.2 2.6 1.2 1 0 0 1 1 1 0 Reduced folate carrier WD40 PF00400.32 ORF66455 - 6.7e-08 33.1 6.0 0.00035 21.3 0.0 4.1 3 2 2 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF66455 - 3.1e-05 24.2 0.0 0.34 11.2 0.0 2.3 2 0 0 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF66455 - 0.0089 14.7 0.3 1.9 7.1 0.0 2.9 2 1 0 3 3 3 2 Nucleoporin Nup120/160 TFB6 PF17110.5 ORF65727 - 0.068 12.9 0.0 0.092 12.5 0.0 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH YDG PF18657.1 ORF63622 - 0.018 15.2 1.3 0.035 14.3 1.3 1.4 1 0 0 1 1 1 0 YDG domain KH_8 PF17903.1 ORF63223 - 1.4e-08 34.7 0.0 2.6e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Krr1 KH1 domain KH_1 PF00013.29 ORF63223 - 3.5e-06 26.8 0.5 6.9e-06 25.8 0.5 1.5 1 0 0 1 1 1 1 KH domain SNAD2 PF18745.1 ORF61856 - 0.097 12.4 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 2 TRAM_LAG1_CLN8 PF03798.16 ORF61518 - 1.9e-09 37.5 16.4 2.7e-09 37.1 16.4 1.3 1 1 0 1 1 1 1 TLC domain RTC4 PF14474.6 ORF61518 - 0.066 13.4 0.3 1 9.6 0.0 2.2 2 0 0 2 2 2 0 RTC4-like domain DUF4875 PF16175.5 ORF59852 - 0.067 13.3 0.1 0.086 13.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4875) DUF282 PF03380.14 ORF5908 - 0.46 10.4 0.1 0.46 10.4 0.1 2.5 3 0 0 3 3 3 0 Caenorhabditis protein of unknown function, DUF282 AAA_18 PF13238.6 ORF59010 - 3.1e-25 89.2 0.0 5.1e-25 88.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 ORF59010 - 2.8e-05 24.6 0.0 0.0001 22.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF59010 - 5.2e-05 23.7 0.0 6.9e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain ADK PF00406.22 ORF59010 - 0.00022 21.3 0.7 0.39 10.8 0.0 2.3 1 1 1 2 2 2 2 Adenylate kinase AAA_22 PF13401.6 ORF59010 - 0.00029 21.1 0.0 0.00051 20.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF59010 - 0.00062 19.8 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 ORF59010 - 0.00098 19.1 1.6 0.0017 18.3 0.2 2.0 2 1 0 3 3 3 1 NTPase AAA_28 PF13521.6 ORF59010 - 0.0011 19.3 0.1 0.0044 17.3 0.0 2.0 1 1 0 2 2 2 1 AAA domain AAA PF00004.29 ORF59010 - 0.002 18.6 0.0 0.0052 17.2 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 ORF59010 - 0.003 17.3 0.7 0.76 9.4 0.0 2.2 2 0 0 2 2 2 1 Thymidylate kinase KTI12 PF08433.10 ORF59010 - 0.0084 15.6 0.0 0.013 14.9 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_19 PF13245.6 ORF59010 - 0.018 15.4 0.1 0.035 14.4 0.1 1.4 1 1 0 1 1 1 0 AAA domain PRK PF00485.18 ORF59010 - 0.02 14.7 0.0 0.74 9.5 0.0 2.2 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 ORF59010 - 0.022 14.7 0.0 0.073 13.0 0.0 1.7 2 0 0 2 2 2 0 Adenylylsulphate kinase RNA_helicase PF00910.22 ORF59010 - 0.026 14.9 0.1 0.072 13.5 0.0 1.8 2 0 0 2 2 2 0 RNA helicase ATP_bind_1 PF03029.17 ORF59010 - 0.034 13.9 0.1 0.067 13.0 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein dNK PF01712.19 ORF59010 - 0.036 13.9 6.8 1.2 8.9 1.4 2.6 1 1 0 2 2 2 0 Deoxynucleoside kinase AAA_24 PF13479.6 ORF59010 - 0.041 13.6 0.2 0.069 12.9 0.2 1.6 1 1 0 1 1 1 0 AAA domain RuvB_N PF05496.12 ORF59010 - 0.047 13.4 0.0 0.078 12.7 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Mur_ligase_M PF08245.12 ORF59010 - 0.05 13.6 0.2 0.35 10.8 0.0 2.1 2 1 0 2 2 2 0 Mur ligase middle domain MeaB PF03308.16 ORF59010 - 0.058 12.4 0.3 0.2 10.6 0.1 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 ORF59010 - 0.078 13.0 0.4 0.4 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF59010 - 0.093 12.0 0.2 0.41 9.9 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 ORF59010 - 0.094 12.9 0.0 0.73 10.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 ORF59010 - 0.098 12.0 0.5 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_30 PF13604.6 ORF59010 - 0.11 12.2 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain Pkinase PF00069.25 ORF56952 - 1.4e-51 175.4 0.3 1.5e-51 175.3 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF56952 - 7.6e-25 87.7 0.0 9e-25 87.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF56952 - 2.6e-05 23.7 0.0 3.7e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF56952 - 2.7e-05 23.3 0.5 3.3e-05 23.0 0.5 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF56952 - 0.0016 17.8 0.1 0.0025 17.2 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family DDHD PF02862.17 ORF56952 - 0.059 13.5 0.1 0.089 12.9 0.1 1.2 1 0 0 1 1 1 0 DDHD domain APH PF01636.23 ORF56952 - 0.081 12.8 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family ubiquitin PF00240.23 ORF5661 - 3.6e-16 58.7 0.3 3.6e-15 55.5 0.2 2.1 2 0 0 2 2 2 1 Ubiquitin family Ribosomal_S27 PF01599.19 ORF5661 - 5.5e-15 55.3 1.3 1.1e-14 54.3 0.5 2.0 1 1 1 2 2 2 1 Ribosomal protein S27a Rad60-SLD PF11976.8 ORF5661 - 5.7e-10 38.9 1.3 4.9e-09 35.9 1.1 2.3 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Sde2_N_Ubi PF13019.6 ORF5661 - 0.14 12.0 0.8 0.2 11.5 0.1 1.6 2 0 0 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain Erythro-docking PF09277.11 ORF55536 - 0.077 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 Erythronolide synthase, docking AAA_18 PF13238.6 ORF54107 - 3.1e-25 89.2 0.0 5.1e-25 88.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 ORF54107 - 2.8e-05 24.6 0.0 0.0001 22.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF54107 - 5.2e-05 23.7 0.0 6.9e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain ADK PF00406.22 ORF54107 - 0.00022 21.3 0.7 0.39 10.8 0.0 2.3 1 1 1 2 2 2 2 Adenylate kinase AAA_22 PF13401.6 ORF54107 - 0.00029 21.1 0.0 0.00051 20.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF54107 - 0.00062 19.8 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 ORF54107 - 0.00098 19.1 1.6 0.0017 18.3 0.2 2.0 2 1 0 3 3 3 1 NTPase AAA_28 PF13521.6 ORF54107 - 0.0011 19.3 0.1 0.0044 17.3 0.0 2.0 1 1 0 2 2 2 1 AAA domain AAA PF00004.29 ORF54107 - 0.002 18.6 0.0 0.0052 17.2 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 ORF54107 - 0.003 17.3 0.7 0.76 9.4 0.0 2.2 2 0 0 2 2 2 1 Thymidylate kinase KTI12 PF08433.10 ORF54107 - 0.0084 15.6 0.0 0.013 14.9 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_19 PF13245.6 ORF54107 - 0.018 15.4 0.1 0.035 14.4 0.1 1.4 1 1 0 1 1 1 0 AAA domain PRK PF00485.18 ORF54107 - 0.02 14.7 0.0 0.74 9.5 0.0 2.2 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 ORF54107 - 0.022 14.7 0.0 0.073 13.0 0.0 1.7 2 0 0 2 2 2 0 Adenylylsulphate kinase RNA_helicase PF00910.22 ORF54107 - 0.026 14.9 0.1 0.072 13.5 0.0 1.8 2 0 0 2 2 2 0 RNA helicase ATP_bind_1 PF03029.17 ORF54107 - 0.034 13.9 0.1 0.067 13.0 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein dNK PF01712.19 ORF54107 - 0.036 13.9 6.8 1.2 8.9 1.4 2.6 1 1 0 2 2 2 0 Deoxynucleoside kinase AAA_24 PF13479.6 ORF54107 - 0.041 13.6 0.2 0.069 12.9 0.2 1.6 1 1 0 1 1 1 0 AAA domain RuvB_N PF05496.12 ORF54107 - 0.047 13.4 0.0 0.078 12.7 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Mur_ligase_M PF08245.12 ORF54107 - 0.05 13.6 0.2 0.35 10.8 0.0 2.1 2 1 0 2 2 2 0 Mur ligase middle domain MeaB PF03308.16 ORF54107 - 0.058 12.4 0.3 0.2 10.6 0.1 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 ORF54107 - 0.078 13.0 0.4 0.4 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF54107 - 0.093 12.0 0.2 0.41 9.9 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 ORF54107 - 0.094 12.9 0.0 0.73 10.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 ORF54107 - 0.098 12.0 0.5 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_30 PF13604.6 ORF54107 - 0.11 12.2 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain Fimbrial PF00419.20 ORF54058 - 1.6e-11 44.7 0.1 1.9e-11 44.4 0.1 1.1 1 0 0 1 1 1 1 Fimbrial protein DUF4004 PF13171.6 ORF53844 - 0.18 12.0 1.6 0.24 11.6 1.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4004) zf-RanBP PF00641.18 ORF52788 - 3.9 6.9 9.0 2.9 7.3 0.1 3.2 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others FAM76 PF16046.5 ORF50925 - 0.0043 16.4 21.2 0.0053 16.2 21.2 1.1 1 0 0 1 1 1 1 FAM76 protein DUF948 PF06103.11 ORF50925 - 0.023 15.0 2.7 0.027 14.7 1.5 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Tropomyosin_1 PF12718.7 ORF50925 - 0.024 14.8 23.4 0.04 14.1 17.2 2.9 2 1 0 2 2 2 0 Tropomyosin like Guanylate_cyc_2 PF09778.9 ORF50925 - 0.049 13.0 1.6 0.063 12.6 1.6 1.3 1 0 0 1 1 1 0 Guanylylate cyclase Exonuc_VII_L PF02601.15 ORF50925 - 0.059 12.9 8.5 0.075 12.6 8.5 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF745 PF05335.13 ORF50925 - 0.21 11.3 6.6 0.2 11.4 5.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF745) Laminin_II PF06009.12 ORF50925 - 1.1 9.3 13.2 1.2 9.1 9.3 2.1 1 1 1 2 2 2 0 Laminin Domain II DUF4094 PF13334.6 ORF50925 - 1.4 9.4 12.0 0.088 13.2 5.3 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4094) UPF0242 PF06785.11 ORF50925 - 2.7 8.1 24.8 1.4 9.0 19.0 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus CENP-Q PF13094.6 ORF50925 - 3.4 7.8 15.8 0.3 11.3 10.6 1.8 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF4407 PF14362.6 ORF50925 - 7.6 5.8 8.4 11 5.2 8.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) APG6_N PF17675.1 ORF50925 - 8.6 6.9 19.5 9.3 6.8 18.3 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region Fer4 PF00037.27 ORF49917 - 2.9e-13 49.0 41.0 5e-07 29.3 1.3 6.2 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_11 PF13247.6 ORF49917 - 8.3e-12 45.1 18.1 8.3e-12 45.1 18.1 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF49917 - 1.7e-11 43.6 37.7 2.2e-05 24.3 1.0 5.1 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_7 PF12838.7 ORF49917 - 4.2e-10 40.1 59.8 3.1e-06 27.7 11.4 3.6 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF49917 - 7.2e-10 38.9 40.2 1.9e-07 31.1 9.8 3.1 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF49917 - 1.3e-08 34.4 34.2 5.5e-05 23.0 0.9 4.7 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_10 PF13237.6 ORF49917 - 2.3e-08 34.0 37.3 1.7e-06 28.1 10.7 3.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF49917 - 1e-07 32.0 40.5 0.0012 18.9 4.8 4.3 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF49917 - 1e-06 29.2 46.6 0.013 16.4 4.6 5.1 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_16 PF13484.6 ORF49917 - 1.1e-06 29.5 35.4 0.026 15.5 1.9 4.4 3 1 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 ORF49917 - 0.00027 21.2 3.0 0.00027 21.2 3.0 5.8 4 2 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.6 ORF49917 - 0.00058 20.3 37.4 0.0048 17.3 14.1 3.5 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 ORF49917 - 0.08 13.7 1.9 0.08 13.7 1.9 4.4 3 2 0 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 ORF49917 - 0.13 12.8 1.5 0.13 12.8 1.5 5.3 4 1 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I DUF4187 PF13821.6 ORF4979 - 1.9e-16 59.6 1.6 3.8e-16 58.6 1.6 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4187) Big_1 PF02369.16 ORF48739 - 0.17 11.9 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) FAM110_N PF14161.6 ORF47510 - 0.058 13.6 0.0 0.099 12.9 0.0 1.3 1 0 0 1 1 1 0 Centrosome-associated N terminus Choline_kinase PF01633.20 ORF46974 - 0.01 15.4 0.4 0.015 14.9 0.2 1.3 1 1 0 1 1 1 0 Choline/ethanolamine kinase OAD_gamma PF04277.13 ORF46974 - 0.8 10.3 3.8 1.8 9.2 3.8 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Saccharop_dh_N PF04455.12 ORF46232 - 1.3e-11 44.8 0.0 2e-11 44.2 0.0 1.3 1 0 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region PIG-P PF08510.12 ORF44599 - 0.31 11.0 5.8 0.87 9.5 5.0 2.0 1 1 0 1 1 1 0 PIG-P DUF2379 PF09543.10 ORF43718 - 1.4 9.2 5.8 3.8 7.7 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2379) EF-hand_6 PF13405.6 ORF42113 - 0.0071 16.2 1.5 0.53 10.4 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain PTPS PF01242.19 ORF42113 - 0.015 15.2 0.6 0.38 10.7 0.1 2.2 2 0 0 2 2 2 0 6-pyruvoyl tetrahydropterin synthase EF-hand_7 PF13499.6 ORF42113 - 0.067 13.6 1.2 0.19 12.2 0.7 2.1 1 1 1 2 2 2 0 EF-hand domain pair DUF2250 PF10007.9 ORF42113 - 0.075 13.1 0.0 1.5 9.0 0.1 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) Cytochrome_CBB3 PF13442.6 ORF39635 - 8e-16 58.1 0.1 1.4e-15 57.4 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF39635 - 5.7e-07 30.6 0.6 6.3e-06 27.3 0.6 2.1 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF39635 - 8.7e-05 22.3 0.3 0.00039 20.1 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain FpoO PF10621.9 ORF39635 - 0.09 13.1 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO DUF2613 PF11021.8 ORF39635 - 3.5 7.8 8.7 0.4 10.8 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) GP24_25 PF17388.2 ORF38442 - 1.2 9.2 3.6 2.1 8.3 0.1 2.4 2 1 0 3 3 3 0 Tail assembly gene products 24 & 25 MerR PF00376.23 ORF38209 - 0.05 13.4 0.0 0.099 12.4 0.0 1.4 1 0 0 1 1 1 0 MerR family regulatory protein DUF4632 PF15451.6 ORF37755 - 0.064 13.3 0.8 24 5.1 0.1 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4632) CHAD PF05235.14 ORF37755 - 1.2 9.0 9.3 0.7 9.8 2.8 2.0 1 1 1 2 2 2 0 CHAD domain LRR_6 PF13516.6 ORF36814 - 0.01 15.8 0.1 0.042 13.9 0.0 1.9 2 0 0 2 2 2 0 Leucine Rich repeat MORN PF02493.20 ORF36533 - 4.2e-06 26.3 7.3 0.024 14.5 0.0 3.8 4 0 0 4 4 4 2 MORN repeat MapZ_EC1 PF18041.1 ORF36533 - 0.027 14.7 0.6 0.037 14.3 0.6 1.2 1 0 0 1 1 1 0 MapZ extracellular domain 1 zinc_ribbon_2 PF13240.6 ORF34753 - 0.051 13.3 0.1 0.088 12.6 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DUF4875 PF16175.5 ORF33734 - 0.067 13.3 0.1 0.086 13.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4875) EF-hand_7 PF13499.6 ORF33415 - 2.1e-13 50.5 5.5 1.5e-08 35.0 1.0 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF33415 - 1.8e-12 46.1 6.2 3e-07 29.8 0.1 4.4 4 0 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF33415 - 7.8e-08 31.3 9.6 4.6e-06 25.8 0.1 4.8 5 1 1 6 6 6 2 EF hand EF-hand_8 PF13833.6 ORF33415 - 2.9e-07 30.2 5.7 0.029 14.2 0.1 3.8 3 1 1 4 4 4 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF33415 - 1.7e-05 25.1 0.2 0.00035 20.9 0.1 2.6 2 1 0 2 2 2 1 EF-hand domain EF-hand_14 PF17959.1 ORF33415 - 0.00016 21.9 0.5 0.035 14.4 0.1 2.4 2 1 0 2 2 2 2 EF-hand domain SCF PF02404.15 ORF33415 - 0.018 14.4 0.2 0.025 13.9 0.2 1.3 1 0 0 1 1 1 0 Stem cell factor FlgD PF03963.14 ORF33415 - 0.062 13.6 1.8 0.087 13.1 0.1 2.0 2 0 0 2 2 2 0 Flagellar hook capping protein - N-terminal region DUF3008 PF11450.8 ORF33415 - 0.19 12.0 0.1 0.19 12.0 0.1 2.5 4 0 0 4 4 4 0 Protein of unknwon function (DUF3008) ACC_epsilon PF13822.6 ORF27151 - 0.23 12.1 0.1 0.23 12.1 0.1 3.1 3 0 0 3 3 3 0 Acyl-CoA carboxylase epsilon subunit ArsA_ATPase PF02374.15 ORF25241 - 0.0051 16.0 0.1 0.0069 15.6 0.1 1.1 1 0 0 1 1 1 1 Anion-transporting ATPase zf-B_box PF00643.24 ORF25241 - 0.0074 16.4 10.2 0.0074 16.4 10.2 1.7 2 0 0 2 2 2 1 B-box zinc finger DUF4407 PF14362.6 ORF23314 - 2.5 7.4 8.5 5 6.4 8.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Pkinase PF00069.25 ORF22632 - 1.4e-51 175.4 0.3 1.5e-51 175.3 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22632 - 7.6e-25 87.7 0.0 9e-25 87.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF22632 - 2.6e-05 23.7 0.0 3.7e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF22632 - 2.7e-05 23.3 0.5 3.3e-05 23.0 0.5 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF22632 - 0.0016 17.8 0.1 0.0025 17.2 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family DDHD PF02862.17 ORF22632 - 0.059 13.5 0.1 0.089 12.9 0.1 1.2 1 0 0 1 1 1 0 DDHD domain APH PF01636.23 ORF22632 - 0.081 12.8 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family EF-hand_6 PF13405.6 ORF22065 - 8.2e-07 28.5 0.0 2.4e-06 27.0 0.0 1.8 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF22065 - 3.7e-06 26.1 0.0 8.3e-06 25.0 0.0 1.6 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF22065 - 2e-05 24.9 0.0 3.4e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair Pkinase PF00069.25 ORF22065 - 0.0001 21.8 0.0 0.00015 21.2 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain EF-hand_8 PF13833.6 ORF22065 - 0.00013 21.7 0.0 0.0011 18.7 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF22065 - 0.00081 18.8 0.0 0.0025 17.2 0.0 2.0 1 0 0 1 1 1 1 EF hand DUF3349 PF11829.8 ORF22065 - 0.053 14.3 0.2 0.11 13.3 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3349) DUF1084 PF06454.11 ORF22065 - 0.068 12.5 0.0 0.087 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) OAF PF14941.6 ORF2152 - 0.042 13.3 5.4 0.061 12.8 5.4 1.2 1 0 0 1 1 1 0 Transcriptional regulator, Out at first CcmF_C PF16327.5 ORF2152 - 0.19 11.0 1.5 0.24 10.7 1.5 1.1 1 0 0 1 1 1 0 Cytochrome c-type biogenesis protein CcmF C-terminal DUF4875 PF16175.5 ORF21391 - 0.18 11.9 0.0 0.36 11.0 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4875) NIT PF08376.10 ORF19305 - 0.0028 18.2 0.0 0.0033 17.9 0.0 1.1 1 0 0 1 1 1 1 Nitrate and nitrite sensing DivIVA PF05103.13 ORF19305 - 0.042 13.9 4.8 0.076 13.1 1.9 2.2 1 1 1 2 2 2 0 DivIVA protein TK PF00265.18 ORF19305 - 0.052 13.4 0.3 0.063 13.1 0.3 1.3 1 0 0 1 1 1 0 Thymidine kinase U1snRNP70_N PF12220.8 ORF19305 - 0.18 12.5 2.8 0.098 13.3 0.7 1.7 2 0 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal TRAM_2 PF18693.1 ORF17994 - 0.047 13.8 0.0 0.072 13.3 0.0 1.3 1 0 0 1 1 1 0 TRAM domain MafB19-deam PF14437.6 ORF17140 - 2e-33 115.1 0.0 2.5e-33 114.8 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase dCMP_cyt_deam_1 PF00383.23 ORF17140 - 3.2e-28 97.6 0.0 4.7e-28 97.0 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Bd3614-deam PF14439.6 ORF17140 - 0.0005 20.2 0.0 0.00086 19.4 0.0 1.5 1 0 0 1 1 1 1 Bd3614-like deaminase SNAD4 PF18750.1 ORF17140 - 0.00055 20.0 0.0 0.001 19.2 0.0 1.4 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC_N PF08210.11 ORF17140 - 0.012 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain NAD1 PF18778.1 ORF17140 - 0.013 15.6 0.0 0.024 14.7 0.0 1.4 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 NAD2 PF18782.1 ORF17140 - 0.02 15.0 0.0 0.026 14.6 0.0 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 APOBEC2 PF18772.1 ORF17140 - 0.028 14.5 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 APOBEC2 APOBEC3 PF18771.1 ORF17140 - 0.067 13.3 0.0 0.34 11.0 0.0 1.9 2 0 0 2 2 2 0 APOBEC3 Spc42p PF11544.8 ORF1529 - 0.6 10.1 8.9 0.073 13.1 2.6 2.3 2 1 1 3 3 3 0 Spindle pole body component Spc42p NUFIP2 PF15293.6 ORF151493 - 8.3 5.2 10.1 10 4.9 10.1 1.1 1 0 0 1 1 1 0 Nuclear fragile X mental retardation-interacting protein 2 DAPG_hydrolase PF18089.1 ORF150466 - 0.7 9.4 3.6 0.88 9.1 2.4 1.6 2 0 0 2 2 2 0 DAPG hydrolase PhiG domain CutC PF03932.14 ORF149127 - 6.8e-35 120.4 0.1 8.7e-35 120.0 0.1 1.1 1 0 0 1 1 1 1 CutC family TPP_enzyme_M PF00205.22 ORF149127 - 0.12 12.1 0.1 0.19 11.5 0.1 1.5 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain NUFIP2 PF15293.6 ORF148510 - 8.3 5.2 10.1 10 4.9 10.1 1.1 1 0 0 1 1 1 0 Nuclear fragile X mental retardation-interacting protein 2 Troponin-I_N PF11636.8 ORF148050 - 2.2 8.3 9.5 6.4 6.8 9.5 1.8 1 0 0 1 1 1 0 Troponin I residues 1-32 BRD4_CDT PF17105.5 ORF146191 - 1.5 8.5 3.8 22 4.7 0.9 2.6 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 PRP21_like_P PF12230.8 ORF14558 - 0.02 14.8 0.6 0.025 14.5 0.6 1.1 1 0 0 1 1 1 0 Pre-mRNA splicing factor PRP21 like protein EamA PF00892.20 ORF145526 - 0.27 11.4 6.4 0.51 10.5 6.4 1.5 1 1 0 1 1 1 0 EamA-like transporter family FKBP_C PF00254.28 ORF143978 - 1.2e-07 31.9 0.0 3.6e-07 30.4 0.0 1.7 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase LysM PF01476.20 ORF143206 - 5.6e-06 26.3 0.0 1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 LysM domain UPF0020 PF01170.18 ORF143206 - 0.0096 15.6 0.1 0.014 15.1 0.1 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 UBA_4 PF14555.6 ORF143206 - 0.031 14.1 0.0 0.056 13.3 0.0 1.4 1 0 0 1 1 1 0 UBA-like domain TMEM239 PF15841.5 ORF141749 - 0.16 11.9 0.4 0.24 11.3 0.4 1.3 1 0 0 1 1 1 0 Transmembrane protein 239 family Tox-HNH-HHH PF15637.6 ORF140301 - 0.1 12.7 0.6 1.7 8.9 0.3 2.5 2 1 1 3 3 3 0 HNH/Endo VII superfamily nuclease toxin with a HHH motif DUF4064 PF13273.6 ORF13878 - 4.5 7.6 12.1 7.4 6.9 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Translin PF01997.16 ORF137696 - 0.064 13.2 0.0 0.093 12.7 0.0 1.4 1 0 0 1 1 1 0 Translin family PI3Ka PF00613.20 ORF137696 - 0.09 12.2 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) Cytochrome_CBB3 PF13442.6 ORF137202 - 8e-16 58.1 0.1 1.4e-15 57.4 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF137202 - 5.7e-07 30.6 0.6 6.3e-06 27.3 0.6 2.1 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF137202 - 8.7e-05 22.3 0.3 0.00039 20.1 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain FpoO PF10621.9 ORF137202 - 0.09 13.1 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO DUF2613 PF11021.8 ORF137202 - 3.5 7.8 8.7 0.4 10.8 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) DUF4407 PF14362.6 ORF135384 - 2.5 7.4 8.5 5 6.4 8.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FtsX PF02687.21 ORF133405 - 0.0073 16.7 0.2 0.011 16.2 0.2 1.2 1 0 0 1 1 1 1 FtsX-like permease family Pox_A14 PF05767.12 ORF133405 - 0.032 14.4 1.3 3.5 7.8 0.3 2.2 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 LRRC37AB_C PF14914.6 ORF133405 - 0.12 12.2 0.9 0.19 11.6 0.2 1.6 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain Flp1_like PF16982.5 ORF133405 - 7.5 6.0 8.8 13 5.3 0.0 2.4 2 0 0 2 2 2 0 Putative Flagellin, Flp1-like, domain YscO-like PF16789.5 ORF133205 - 0.016 15.3 0.7 0.022 14.8 0.7 1.2 1 0 0 1 1 1 0 YscO-like protein RNA_pol PF00940.19 ORF133205 - 0.031 13.1 0.0 0.038 12.8 0.0 1.1 1 0 0 1 1 1 0 DNA-dependent RNA polymerase Stc1 PF12898.7 ORF132009 - 0.0079 16.7 1.6 1.6 9.3 0.0 3.1 2 2 0 2 2 2 1 Stc1 domain DUF3487 PF11990.8 ORF132009 - 0.0079 16.1 1.4 3.7 7.5 0.0 3.0 2 1 1 3 3 3 2 Protein of unknown function (DUF3487) TMEM173 PF15009.6 ORF132009 - 0.29 10.2 0.5 0.39 9.8 0.5 1.1 1 0 0 1 1 1 0 Transmembrane protein 173 Bowman-Birk_leg PF00228.20 ORF132009 - 0.32 11.4 0.3 0.32 11.4 0.3 4.2 4 0 0 4 4 4 0 Bowman-Birk serine protease inhibitor family Pro_isomerase PF00160.21 ORF131406 - 1.2e-47 162.1 0.0 1.4e-47 161.9 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SR-25 PF10500.9 ORF131243 - 0.88 9.1 10.0 1.2 8.7 10.0 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Cytochrome_CBB3 PF13442.6 ORF130349 - 8e-16 58.1 0.1 1.4e-15 57.4 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF130349 - 5.7e-07 30.6 0.6 6.3e-06 27.3 0.6 2.1 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF130349 - 8.7e-05 22.3 0.3 0.00039 20.1 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain FpoO PF10621.9 ORF130349 - 0.09 13.1 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO DUF2613 PF11021.8 ORF130349 - 3.5 7.8 8.7 0.4 10.8 0.5 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) TetR_N PF00440.23 ORF128474 - 9.7e-09 34.9 0.1 1.5e-08 34.2 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_31 PF17940.1 ORF128474 - 1.9e-08 34.4 0.0 3.1e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_6 PF13977.6 ORF128474 - 5.4e-05 23.4 0.1 0.00044 20.5 0.1 2.2 1 1 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_C_28 PF17937.1 ORF128474 - 0.0075 16.7 0.4 0.018 15.5 0.4 1.7 1 1 1 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_C_11 PF16859.5 ORF128474 - 0.024 14.9 0.2 0.29 11.5 0.1 2.4 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain GDPD_2 PF13653.6 ORF127369 - 1.9e-05 25.0 0.0 9.1e-05 22.8 0.0 2.2 2 0 0 2 2 2 1 Glycerophosphoryl diester phosphodiesterase family GDPD PF03009.17 ORF127369 - 3.2e-05 23.8 0.1 0.00073 19.3 0.0 2.0 2 0 0 2 2 2 1 Glycerophosphoryl diester phosphodiesterase family DUF4996 PF16387.5 ORF127369 - 0.0021 18.5 0.1 0.13 12.8 0.0 2.4 2 0 0 2 2 2 1 Domain of unknown function DUF1642 PF07852.11 ORF127283 - 0.2 12.3 3.5 0.41 11.2 3.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1642) zf-RING_2 PF13639.6 ORF126314 - 2.6e-13 50.1 5.4 2.6e-13 50.1 5.4 2.1 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF126314 - 4e-10 39.2 3.6 1e-09 38.0 3.6 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF126314 - 1.2e-07 31.5 5.9 2.5e-07 30.4 5.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF126314 - 3.5e-07 30.4 9.1 4.2e-06 26.9 9.1 2.4 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF126314 - 1e-05 25.3 6.2 1e-05 25.3 6.2 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF126314 - 2.1e-05 24.3 3.8 2.1e-05 24.3 3.8 1.7 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF126314 - 4e-05 23.5 4.9 4e-05 23.5 4.9 1.7 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF126314 - 4.6e-05 23.4 3.1 0.0001 22.2 3.1 1.7 1 0 0 1 1 1 1 RING-type zinc-finger Baculo_RING PF05883.11 ORF126314 - 0.00012 22.1 2.5 0.00013 22.0 1.3 1.6 1 1 1 2 2 2 1 Baculovirus U-box/Ring-like domain Prok-RING_4 PF14447.6 ORF126314 - 0.0016 18.2 6.4 0.019 14.8 5.8 2.4 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF126314 - 0.005 16.9 4.6 0.017 15.1 4.6 2.0 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_14 PF17978.1 ORF126314 - 0.0079 16.6 1.1 0.019 15.4 1.1 1.6 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain FANCL_C PF11793.8 ORF126314 - 0.0086 16.2 5.8 0.038 14.2 5.8 2.1 1 1 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 ORF126314 - 0.0098 16.0 6.6 0.022 14.9 6.6 1.6 1 0 0 1 1 1 1 RING-variant domain Zn_ribbon_17 PF17120.5 ORF126314 - 0.025 14.2 3.4 0.025 14.2 3.4 1.9 2 0 0 2 2 1 0 Zinc-ribbon, C4HC2 type Baculo_IE-1 PF05290.11 ORF126314 - 0.029 14.3 7.1 0.042 13.8 6.7 1.6 1 1 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) tRNA_U5-meth_tr PF05958.11 ORF125253 - 6.4e-18 64.9 0.2 1e-16 60.9 0.2 2.1 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 ORF125253 - 4.9e-07 29.7 0.3 7.8e-07 29.0 0.3 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 ORF125253 - 8.9e-07 28.7 0.0 1.1e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 ORF125253 - 1.6e-06 28.7 0.0 3.1e-06 27.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 ORF125253 - 3.5e-06 26.7 0.3 5.6e-06 26.0 0.1 1.4 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 ORF125253 - 6.7e-05 22.4 0.0 8.4e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 ORF125253 - 7.1e-05 22.4 0.0 8.4e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 ORF125253 - 0.0014 19.2 0.0 0.0029 18.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF125253 - 0.0079 16.0 0.1 0.01 15.6 0.1 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 ORF125253 - 0.011 15.1 0.1 0.017 14.5 0.1 1.3 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.6 ORF125253 - 0.028 14.4 0.1 0.037 14.0 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain NodS PF05401.11 ORF125253 - 0.034 13.8 0.1 0.052 13.2 0.1 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_18 PF12847.7 ORF125253 - 0.039 13.9 0.1 0.047 13.6 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF125253 - 0.042 13.7 0.0 0.14 12.0 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 ORF125253 - 0.053 13.0 0.1 0.071 12.6 0.1 1.2 1 0 0 1 1 1 0 Putative methyltransferase Met_10 PF02475.16 ORF125253 - 0.13 11.9 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein RrnaAD PF00398.20 ORF125253 - 0.17 10.9 0.0 0.22 10.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase N6_N4_Mtase PF01555.18 ORF125253 - 0.24 11.1 0.0 0.37 10.5 0.0 1.2 1 0 0 1 1 1 0 DNA methylase T2SSM PF04612.12 ORF12367 - 2e-41 141.7 2.2 2.4e-41 141.5 2.2 1.1 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein M TetR_C_11 PF16859.5 ORF12367 - 0.098 13.0 0.4 0.27 11.5 0.3 1.8 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Mce4_CUP1 PF11887.8 ORF12367 - 0.14 11.6 0.1 0.19 11.2 0.1 1.2 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative CAF1 PF04857.20 ORF122726 - 1.1e-33 116.8 0.6 1.2e-33 116.7 0.6 1.0 1 0 0 1 1 1 1 CAF1 family ribonuclease Fer4_17 PF13534.6 ORF122044 - 2.9e-09 37.3 8.2 2.9e-09 37.3 8.2 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF122044 - 4.4e-08 33.5 7.0 4.4e-08 33.5 7.0 2.0 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF122044 - 1.1e-05 25.4 7.3 1.1e-05 25.4 7.3 2.0 3 0 0 3 3 3 1 4Fe-4S dicluster domain SAA PF00277.18 ORF122044 - 0.16 12.4 0.0 0.23 12.0 0.0 1.2 1 0 0 1 1 1 0 Serum amyloid A protein Fer4_7 PF12838.7 ORF122044 - 0.81 10.3 18.3 0.84 10.3 13.4 2.9 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF122044 - 1.5 9.0 18.1 0.084 13.1 11.2 2.4 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF122044 - 1.6 9.4 15.0 0.52 11.0 2.9 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain DUF3410 PF11890.8 ORF116479 - 0.038 13.8 3.6 0.18 11.6 3.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3410) Sugar_tr PF00083.24 ORF116466 - 3.2e-20 72.4 12.2 3.5e-20 72.3 12.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF116466 - 0.0037 16.2 14.2 0.036 13.0 7.2 2.1 1 1 0 2 2 2 2 Major Facilitator Superfamily AhpC-TSA PF00578.21 ORF115976 - 2.7e-23 82.2 0.0 4.8e-23 81.4 0.0 1.4 2 0 0 2 2 2 1 AhpC/TSA family Redoxin PF08534.10 ORF115976 - 1.5e-13 50.7 0.0 2e-13 50.3 0.0 1.2 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 ORF115976 - 3.3e-05 24.0 0.0 6.3e-05 23.1 0.0 1.3 1 1 0 1 1 1 1 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 ORF115976 - 0.0035 16.9 0.0 0.0057 16.2 0.0 1.3 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF899) DUF3425 PF11905.8 ORF114904 - 0.15 12.0 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) Choline_kinase PF01633.20 ORF114308 - 0.01 15.4 0.4 0.015 14.9 0.2 1.3 1 1 0 1 1 1 0 Choline/ethanolamine kinase OAD_gamma PF04277.13 ORF114308 - 0.8 10.3 3.8 1.8 9.2 3.8 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain ArabFuran-catal PF09206.11 ORF1142 - 7.7e-37 127.3 0.1 9.9e-37 126.9 0.1 1.1 1 0 0 1 1 1 1 Alpha-L-arabinofuranosidase B, catalytic CKS PF01111.19 ORF112919 - 0.011 16.0 0.0 0.016 15.5 0.0 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit SPT16 PF08644.11 ORF112919 - 0.17 12.1 0.4 0.24 11.6 0.4 1.2 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) API5 PF05918.11 ORF112919 - 3.1 6.5 5.1 3.6 6.3 5.1 1.1 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) MORN PF02493.20 ORF111605 - 1.8e-14 52.6 24.6 5.9e-06 25.9 2.0 5.4 5 0 0 5 5 5 4 MORN repeat AKAP7_NLS PF10469.9 ORF111605 - 0.0079 16.1 0.4 0.01 15.7 0.4 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain TPR_MLP1_2 PF07926.12 ORF109628 - 0.053 13.6 12.3 0.087 12.9 10.3 2.1 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF4419 PF14388.6 ORF10810 - 6.7e-22 78.3 0.0 7.9e-22 78.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) Methyltransf_11 PF08241.12 ORF106994 - 0.012 16.2 0.0 0.021 15.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 ORF106994 - 0.069 13.9 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ribosomal_L18 PF17135.4 ORF106855 - 1.3e-67 226.8 0.5 1.5e-67 226.6 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 ORF106855 - 0.01 16.5 0.2 0.014 16.1 0.2 1.4 1 1 0 1 1 1 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Glyco_transf_18 PF15024.6 ORF106855 - 0.14 10.7 0.1 0.18 10.4 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 zf-HC5HC2H_2 PF13832.6 ORF104296 - 0.0085 16.2 0.5 0.026 14.7 0.0 1.9 2 0 0 2 2 2 1 PHD-zinc-finger like domain DUF1642 PF07852.11 ORF100336 - 0.2 12.3 3.5 0.41 11.2 3.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1642) zf-C2H2 PF00096.26 ORF100053 - 7.3e-09 35.6 11.6 3.8e-05 23.9 4.5 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF100053 - 4.1e-08 33.3 2.7 4.1e-08 33.3 2.7 3.4 3 1 0 3 3 3 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF100053 - 1e-05 25.9 10.7 0.02 15.7 3.9 2.6 2 0 0 2 2 2 2 C2H2-type zinc finger STT3_PglB_C PF18527.1 ORF100053 - 0.12 12.5 0.1 0.24 11.5 0.1 1.4 1 0 0 1 1 1 0 STT3/PglB C-terminal beta-barrel domain zf-met PF12874.7 ORF100053 - 0.13 12.7 5.4 0.5 10.8 1.2 2.6 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 ORF100053 - 0.52 10.4 7.6 0.14 12.2 4.3 1.8 2 0 0 2 2 2 0 C2H2-type zinc finger WD40 PF00400.32 NODE_39540_length_529_cov_1.607287_g32129_i0forward_frame_1 - 7.9e-05 23.4 0.1 0.00034 21.4 0.0 2.1 3 0 0 3 3 3 1 WD domain, G-beta repeat DUF421 PF04239.12 NODE_39532_length_529_cov_3.334008_g32121_i0reverse_frame_1 - 5.6e-05 22.9 0.0 8.3e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF421) CBP_BcsF PF11120.8 NODE_39532_length_529_cov_3.334008_g32121_i0reverse_frame_1 - 0.12 12.5 4.6 14 5.8 0.1 3.1 2 1 1 3 3 3 0 Cellulose biosynthesis protein BcsF HTH_18 PF12833.7 NODE_39531_length_529_cov_3.876518_g32120_i0reverse_frame_1 - 0.069 13.4 1.3 0.069 13.4 1.3 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Pkinase PF00069.25 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_1 - 1e-06 28.3 0.0 1.3e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_1 - 0.00086 18.7 0.0 0.0013 18.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase HydF_tetramer PF18133.1 NODE_39525_length_529_cov_67.728745_g32114_i0reverse_frame_1 - 0.23 11.2 0.7 14 5.5 0.0 2.7 2 1 1 3 3 3 0 Hydrogen maturase F tetramerization domain Ribosomal_S17 PF00366.20 NODE_39524_length_529_cov_71.957490_g11378_i1reverse_frame_1 - 0.067 13.3 0.0 0.15 12.2 0.0 1.6 1 1 0 1 1 1 0 Ribosomal protein S17 DUF5348 PF17295.2 NODE_39480_length_530_cov_2.612121_g32073_i0forward_frame_1 - 0.054 13.4 0.0 0.085 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5348) Helitron_like_N PF14214.6 NODE_39480_length_530_cov_2.612121_g32073_i0forward_frame_1 - 0.079 13.2 0.0 0.097 12.9 0.0 1.1 1 0 0 1 1 1 0 Helitron helicase-like domain at N-terminus OAD_gamma PF04277.13 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_1 - 0.08 13.5 0.1 0.11 13.1 0.1 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain RTP801_C PF07809.11 NODE_39471_length_530_cov_72.084848_g32064_i0reverse_frame_1 - 0.088 12.7 0.0 0.57 10.1 0.0 1.9 1 1 1 2 2 2 0 RTP801 C-terminal region IBP39 PF11422.8 NODE_39467_length_530_cov_94.292929_g32060_i0forward_frame_1 - 0.017 14.9 0.0 0.023 14.5 0.0 1.1 1 0 0 1 1 1 0 Initiator binding protein 39 kDa DUF4921 PF16268.5 NODE_39448_length_530_cov_524.303030_g32041_i0reverse_frame_1 - 0.17 10.7 0.0 0.2 10.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4921) mRNA_stabil PF13929.6 NODE_39439_length_531_cov_1.971774_g32036_i0reverse_frame_1 - 0.012 14.6 0.3 0.016 14.2 0.3 1.2 1 0 0 1 1 1 0 mRNA stabilisation GH97_N PF14508.6 NODE_39438_length_531_cov_2.026210_g32035_i0reverse_frame_1 - 0.15 11.5 0.0 0.24 10.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyl-hydrolase 97 N-terminal RVT_1 PF00078.27 NODE_39436_length_531_cov_2.945565_g32033_i0forward_frame_1 - 3.2e-25 88.9 0.0 3.7e-25 88.8 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DoxA PF07680.11 NODE_39436_length_531_cov_2.945565_g32033_i0forward_frame_1 - 0.047 13.6 0.0 0.07 13.0 0.0 1.2 1 0 0 1 1 1 0 TQO small subunit DoxA Ank_5 PF13857.6 NODE_39434_length_531_cov_3.239919_g32031_i0forward_frame_1 - 2.7e-19 69.0 0.9 5.3e-09 36.2 0.2 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_39434_length_531_cov_3.239919_g32031_i0forward_frame_1 - 1e-17 64.5 1.2 1.9e-13 50.8 0.3 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_39434_length_531_cov_3.239919_g32031_i0forward_frame_1 - 1e-17 64.2 5.1 2.1e-09 37.7 0.8 3.6 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_39434_length_531_cov_3.239919_g32031_i0forward_frame_1 - 3.4e-12 46.2 0.5 1.6e-05 25.1 0.0 3.9 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 NODE_39434_length_531_cov_3.239919_g32031_i0forward_frame_1 - 6.6e-12 44.5 1.4 0.00096 19.4 0.0 4.0 4 0 0 4 4 4 3 Ankyrin repeat EF-hand_6 PF13405.6 NODE_39409_length_531_cov_110.562500_g32006_i0reverse_frame_1 - 0.014 15.3 0.3 0.036 14.0 0.0 1.8 2 0 0 2 2 2 0 EF-hand domain EF-hand_7 PF13499.6 NODE_39409_length_531_cov_110.562500_g32006_i0reverse_frame_1 - 0.084 13.3 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_5 PF13202.6 NODE_39409_length_531_cov_110.562500_g32006_i0reverse_frame_1 - 0.1 12.1 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 EF hand RPN1_C PF18051.1 NODE_39407_length_531_cov_135.235887_g32004_i0reverse_frame_1 - 0.00086 19.3 5.2 73 3.5 0.0 5.9 6 0 0 6 6 6 1 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal GTP1_OBG PF01018.22 NODE_39407_length_531_cov_135.235887_g32004_i0reverse_frame_1 - 1.8 8.2 5.3 22 4.6 0.4 2.7 1 1 3 4 4 4 0 GTP1/OBG FLYWCH_u PF16662.5 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_1 - 0.2 11.7 9.6 5.4 7.1 1.1 3.9 1 1 3 4 4 4 0 FLYWCH-type zinc finger-containing protein 1 Thioredoxin_16 PF18569.1 NODE_39384_length_531_cov_38839.167339_g31984_i0forward_frame_1 - 0.21 11.7 1.3 1.2 9.3 0.1 2.3 2 0 0 2 2 2 0 Thioredoxin-like domain Ephrin_rec_like PF07699.13 NODE_39378_length_532_cov_2.778672_g31979_i0reverse_frame_2 - 0.00077 19.2 0.6 0.0015 18.2 0.6 1.4 1 0 0 1 1 1 1 Putative ephrin-receptor like NCD3G PF07562.14 NODE_39378_length_532_cov_2.778672_g31979_i0reverse_frame_2 - 0.038 14.0 5.0 0.09 12.8 5.0 1.6 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_39378_length_532_cov_2.778672_g31979_i0reverse_frame_2 - 0.11 12.9 4.0 0.32 11.4 0.8 2.3 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region Nup54_57_C PF18570.1 NODE_39378_length_532_cov_2.778672_g31979_i0forward_frame_3 - 0.049 13.2 1.9 0.062 12.9 0.7 1.7 2 0 0 2 2 2 0 NUP57/Nup54 C-terminal domain BPD_transp_2 PF02653.16 NODE_39376_length_532_cov_2.929577_g31977_i0reverse_frame_3 - 0.023 13.9 0.1 0.029 13.5 0.1 1.0 1 0 0 1 1 1 0 Branched-chain amino acid transport system / permease component SpoU_methylase PF00588.19 NODE_39376_length_532_cov_2.929577_g31977_i0reverse_frame_2 - 8.3e-21 74.6 0.0 1.2e-20 74.1 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family RIFIN PF02009.16 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 9.4e-05 22.5 1.4 0.0001 22.3 1.4 1.1 1 0 0 1 1 1 1 Rifin Orf78 PF06024.12 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.0016 18.7 0.3 0.0026 18.0 0.3 1.2 1 0 0 1 1 1 1 Orf78 (ac78) Stevor PF17410.2 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.0019 17.8 2.6 0.0024 17.5 2.6 1.1 1 0 0 1 1 1 1 Subtelomeric Variable Open Reading frame DUF5383 PF17355.2 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.0068 16.8 1.8 0.012 16.0 1.8 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5383) TMEM154 PF15102.6 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.0075 16.2 14.7 0.012 15.5 14.7 1.3 1 0 0 1 1 1 1 TMEM154 protein family SP_C-Propep PF08999.10 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.024 14.4 4.5 0.038 13.8 4.5 1.3 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF5305 PF17231.2 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.041 13.3 9.1 0.055 12.9 9.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) MGC-24 PF05283.11 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.043 14.3 10.6 0.064 13.7 10.6 1.3 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Renin_r PF07850.14 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.054 14.1 3.2 0.09 13.4 3.2 1.3 1 0 0 1 1 1 0 Renin receptor-like protein SSP160 PF06933.11 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.13 10.4 28.3 0.17 10.0 28.3 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Peptidase_M56 PF05569.11 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 0.17 11.1 4.1 0.24 10.5 4.1 1.2 1 0 0 1 1 1 0 BlaR1 peptidase M56 FSA_C PF10479.9 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 1.7 6.7 13.9 2 6.4 13.9 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Viral_Beta_CD PF04530.12 NODE_39375_length_532_cov_3.418511_g31976_i0reverse_frame_3 - 5.7 7.3 9.2 8.8 6.6 9.2 1.2 1 0 0 1 1 1 0 Viral Beta C/D like family AF-4 PF05110.13 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_3 - 0.27 9.3 11.2 0.32 9.0 11.2 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein Secretin_N_2 PF07655.13 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_3 - 0.81 10.3 11.6 1.2 9.7 11.6 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain FAM199X PF15814.5 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_3 - 1.2 8.1 12.6 2.6 7.0 11.5 1.8 2 0 0 2 2 2 0 Protein family FAM199X CDK2AP PF09806.9 NODE_39375_length_532_cov_3.418511_g31976_i0forward_frame_3 - 2 8.4 4.3 2.7 8.0 4.3 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein Radical_SAM PF04055.21 NODE_39374_length_532_cov_3.981891_g31975_i0forward_frame_3 - 0.00052 20.4 0.3 0.0011 19.4 0.3 1.7 1 1 0 1 1 1 1 Radical SAM superfamily TMEM239 PF15841.5 NODE_39374_length_532_cov_3.981891_g31975_i0forward_frame_3 - 0.037 13.9 0.0 3.9 7.4 0.0 2.1 2 0 0 2 2 2 0 Transmembrane protein 239 family Axin_b-cat_bind PF08833.10 NODE_39371_length_532_cov_51.937626_g31972_i0reverse_frame_3 - 0.03 14.4 0.5 0.059 13.5 0.5 1.5 1 0 0 1 1 1 0 Axin beta-catenin binding domain CsoS2_M PF12288.8 NODE_39369_length_532_cov_64.150905_g31970_i0reverse_frame_2 - 0.087 12.2 0.4 0.11 11.9 0.4 1.1 1 0 0 1 1 1 0 Carboxysome shell peptide mid-region NUT PF12881.7 NODE_39369_length_532_cov_64.150905_g31970_i0forward_frame_2 - 0.14 10.6 0.9 0.16 10.4 0.9 1.0 1 0 0 1 1 1 0 NUT protein AAA PF00004.29 NODE_39354_length_532_cov_144.760563_g31956_i0reverse_frame_2 - 8.3e-05 23.0 0.0 0.00015 22.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Gly_acyl_tr_N PF06021.11 NODE_39330_length_533_cov_1.995984_g31934_i0reverse_frame_2 - 0.13 12.3 0.2 0.17 12.0 0.2 1.2 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase MreB_Mbl PF06723.13 NODE_39330_length_533_cov_1.995984_g31934_i0forward_frame_3 - 0.18 10.6 0.3 0.24 10.2 0.3 1.1 1 0 0 1 1 1 0 MreB/Mbl protein NiFeSe_Hases PF00374.19 NODE_39320_length_533_cov_2.935743_g31924_i0reverse_frame_2 - 5.3e-14 52.0 0.0 6.8e-14 51.6 0.0 1.1 1 0 0 1 1 1 1 Nickel-dependent hydrogenase Complex1_49kDa PF00346.19 NODE_39320_length_533_cov_2.935743_g31924_i0reverse_frame_2 - 0.15 11.1 0.1 0.23 10.5 0.1 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit zf_UBZ PF18439.1 NODE_39320_length_533_cov_2.935743_g31924_i0forward_frame_3 - 0.082 12.5 0.1 0.16 11.6 0.1 1.5 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger GET2 PF08690.10 NODE_39317_length_533_cov_3.578313_g31921_i0reverse_frame_2 - 0.14 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 Bac_small_YrzI PF09501.10 NODE_39305_length_533_cov_65.656627_g31909_i0forward_frame_3 - 0.022 14.9 1.9 1.1 9.4 0.2 2.4 2 0 0 2 2 2 0 Probable sporulation protein (Bac_small_yrzI) GSu_C4xC__C2xCH PF09698.10 NODE_39302_length_533_cov_76.795181_g31498_i1reverse_frame_2 - 0.017 15.9 0.8 0.017 15.9 0.8 2.3 2 0 0 2 2 2 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) DUF4345 PF14248.6 NODE_39302_length_533_cov_76.795181_g31498_i1forward_frame_3 - 0.089 12.7 0.7 0.17 11.8 0.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4345) Furin-like_2 PF15913.5 NODE_39277_length_533_cov_176.130522_g31883_i0reverse_frame_2 - 0.63 10.2 16.6 0.15 12.2 7.1 2.2 1 1 1 2 2 2 0 Furin-like repeat, cysteine-rich IQ PF00612.27 NODE_39276_length_533_cov_194.365462_g31882_i0forward_frame_2 - 4.2e-06 26.1 23.4 0.24 11.3 1.2 4.7 4 0 0 4 4 4 4 IQ calmodulin-binding motif Citrate_ly_lig PF08218.11 NODE_39276_length_533_cov_194.365462_g31882_i0forward_frame_2 - 0.082 12.6 3.7 0.12 12.1 3.7 1.3 1 0 0 1 1 1 0 Citrate lyase ligase C-terminal domain CC2D2AN-C2 PF15625.6 NODE_39276_length_533_cov_194.365462_g31882_i0forward_frame_2 - 0.1 12.3 0.3 0.1 12.3 0.3 1.8 2 1 0 2 2 2 0 CC2D2A N-terminal C2 domain NFACT-R_2 PF18297.1 NODE_39276_length_533_cov_194.365462_g31882_i0forward_frame_2 - 1.4 9.2 13.4 3.9 7.7 1.1 3.3 1 1 2 3 3 3 0 NFACT protein RNA binding domain DUF4878 PF12870.7 NODE_39276_length_533_cov_194.365462_g31882_i0forward_frame_2 - 1.4 9.2 6.5 0.65 10.3 0.5 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4878) DUF4647 PF15504.6 NODE_39276_length_533_cov_194.365462_g31882_i0forward_frame_2 - 1.5 7.8 15.5 1.9 7.5 15.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4647) Transferase PF02458.15 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 0.02 13.6 0.0 0.025 13.3 0.0 1.0 1 0 0 1 1 1 0 Transferase family RP-C_C PF11800.8 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 0.022 14.8 0.6 0.026 14.6 0.6 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region Adaptin_binding PF10199.9 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 0.1 13.2 8.3 0.14 12.7 7.5 1.6 2 0 0 2 2 2 0 Alpha and gamma adaptin binding protein p34 ALMT PF11744.8 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 0.16 10.8 2.2 0.18 10.6 2.2 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter O-antigen_lig PF13425.6 NODE_39266_length_533_cov_901.299197_g31874_i0forward_frame_2 - 1.5 7.5 5.9 2.2 7.0 5.9 1.3 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3149 PF11346.8 NODE_39265_length_533_cov_1157.277108_g31873_i0reverse_frame_3 - 0.0039 16.8 0.1 0.01 15.4 0.1 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF3149) GP41 PF00517.17 NODE_39258_length_534_cov_2.853707_g31866_i0reverse_frame_2 - 0.032 14.1 1.7 0.04 13.8 0.1 1.8 2 0 0 2 2 2 0 Retroviral envelope protein KRE1 PF17056.5 NODE_39258_length_534_cov_2.853707_g31866_i0forward_frame_3 - 0.08 12.7 0.4 0.08 12.7 0.4 2.2 3 0 0 3 3 3 0 Killer toxin-resistance protein 1 Anoctamin PF04547.12 NODE_39258_length_534_cov_2.853707_g31866_i0forward_frame_2 - 0.037 12.9 0.1 0.045 12.6 0.1 1.1 1 0 0 1 1 1 0 Calcium-activated chloride channel # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks137.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks137.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks137.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks137.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DEAD_assoc PF08494.11 NODE_39252_length_534_cov_3.326653_g31860_i0forward_frame_2 - 0.011 15.6 0.1 0.014 15.2 0.1 1.2 1 0 0 1 1 1 0 DEAD/H associated DUF3848 PF12959.7 NODE_39242_length_534_cov_81.909820_g31850_i0reverse_frame_2 - 0.0024 17.9 0.5 0.0039 17.2 0.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3848) Lipoprotein_2 PF00921.17 NODE_39242_length_534_cov_81.909820_g31850_i0reverse_frame_2 - 0.22 11.0 10.1 1.7 8.2 1.1 2.1 2 0 0 2 2 2 0 Borrelia lipoprotein DUF3305 PF11749.8 NODE_39239_length_534_cov_90.611222_g31847_i0reverse_frame_3 - 0.16 12.1 0.1 5.5 7.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3305) YPEB PF14620.6 NODE_39236_length_534_cov_104.769539_g31844_i0forward_frame_2 - 0.098 12.0 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 YpeB sporulation NAC PF01849.18 ORF99785 - 9e-24 83.2 0.6 1.9e-23 82.2 0.6 1.6 1 0 0 1 1 1 1 NAC domain Peptidase_M16_M PF16187.5 ORF99709 - 0.18 11.1 0.1 0.25 10.6 0.1 1.1 1 0 0 1 1 1 0 Middle or third domain of peptidase_M16 ESCRT-II PF05871.12 ORF99583 - 9.6e-16 58.3 0.0 1.3e-15 57.9 0.0 1.2 1 0 0 1 1 1 1 ESCRT-II complex subunit ACR_tran PF00873.19 ORF99482 - 2.3e-67 227.6 16.3 2.6e-67 227.4 16.3 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family ALG3 PF05208.13 ORF99482 - 0.081 12.3 1.1 0.092 12.2 1.1 1.2 1 0 0 1 1 1 0 ALG3 protein MMPL PF03176.15 ORF99482 - 0.49 9.3 9.5 0.61 9.0 9.5 1.2 1 0 0 1 1 1 0 MMPL family Pirin_C PF05726.13 ORF99118 - 1.3e-21 76.9 0.0 2.5e-21 76.0 0.0 1.4 2 0 0 2 2 2 1 Pirin C-terminal cupin domain pRN1_helical PF13010.6 ORF97912 - 0.23 11.4 0.0 0.33 10.9 0.0 1.2 1 0 0 1 1 1 0 Primase helical domain zf-TAZ PF02135.16 ORF96837 - 0.25 11.8 6.4 0.046 14.2 2.4 1.8 2 0 0 2 2 2 0 TAZ zinc finger DUF1822 PF08852.11 ORF95187 - 0.13 11.3 0.0 0.18 10.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1822) PARM PF17061.5 ORF91408 - 0.82 9.8 6.7 0.23 11.5 2.4 1.8 2 0 0 2 2 2 0 PARM SUR7 PF06687.12 ORF9085 - 0.0077 15.9 2.9 0.0077 15.9 2.9 1.4 2 0 0 2 2 2 1 SUR7/PalI family PIRT PF15099.6 ORF9085 - 0.49 10.0 5.0 0.061 12.9 0.8 1.6 2 0 0 2 2 2 0 Phosphoinositide-interacting protein family RPN1_C PF18051.1 ORF90233 - 4.7e-29 100.2 0.1 7.5e-29 99.5 0.1 1.3 1 0 0 1 1 1 1 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal LptF_LptG PF03739.14 ORF89760 - 6.8 5.4 10.1 8.8 5.1 10.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG DUF5401 PF17380.2 ORF89760 - 7.5 4.5 31.8 9 4.2 31.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) HAP2-GCS1 PF10699.9 ORF86955 - 0.039 13.9 0.3 0.13 12.3 0.0 1.9 2 0 0 2 2 2 0 Male gamete fusion factor LicD PF04991.13 ORF86616 - 0.26 11.4 10.0 0.065 13.4 5.7 1.8 1 1 1 2 2 2 0 LicD family DUF4820 PF16091.5 ORF86616 - 6.2 6.1 10.0 8.3 5.7 10.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) AMP-binding PF00501.28 ORF84943 - 2e-22 79.4 0.1 2.7e-22 79.0 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF84943 - 1.9e-16 60.8 0.2 2.9e-16 60.2 0.2 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Transmemb_17 PF09799.9 ORF81477 - 6e-15 55.8 3.6 6e-15 55.8 3.6 1.5 1 1 0 1 1 1 1 Predicted membrane protein P21-Arc PF04062.14 ORF7761 - 3.4e-52 177.0 0.0 3.7e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 ARP2/3 complex ARPC3 (21 kDa) subunit DUF4381 PF14316.6 ORF76800 - 0.0086 16.3 2.1 0.014 15.7 2.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4381) LapA_dom PF06305.11 ORF76800 - 0.46 10.3 3.5 1.1 9.1 3.5 1.7 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain PMAIP1 PF15150.6 ORF76305 - 0.06 13.2 0.9 0.17 11.8 0.9 1.8 1 0 0 1 1 1 0 Phorbol-12-myristate-13-acetate-induced WD40 PF00400.32 ORF75166 - 9.9e-19 67.3 14.2 4.1e-09 36.9 0.2 4.7 5 0 0 5 5 5 4 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF75166 - 4.5e-09 35.7 0.1 0.0061 15.6 0.0 3.0 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 ORF75166 - 9.8e-09 35.4 0.0 0.00029 21.1 0.0 3.5 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF75166 - 6.4e-06 26.0 1.2 0.24 11.4 0.2 3.2 3 0 0 3 3 3 2 WD40-like Beta Propeller Repeat Cytochrom_D1 PF02239.16 ORF75166 - 0.013 14.1 0.0 0.014 14.0 0.0 1.2 1 0 0 1 1 1 0 Cytochrome D1 heme domain Nbas_N PF15492.6 ORF75166 - 0.022 14.1 1.3 0.92 8.8 0.0 2.9 1 1 3 4 4 4 0 Neuroblastoma-amplified sequence, N terminal Nup160 PF11715.8 ORF75166 - 0.046 12.4 0.7 1.2 7.7 0.0 2.6 1 1 2 3 3 3 0 Nucleoporin Nup120/160 eIF2A PF08662.11 ORF75166 - 0.06 13.2 0.0 0.35 10.7 0.0 1.9 1 1 1 2 2 2 0 Eukaryotic translation initiation factor eIF2A Proteasome_A_N PF10584.9 ORF75166 - 0.45 10.2 5.8 6.7 6.5 0.2 2.9 3 0 0 3 3 3 0 Proteasome subunit A N-terminal signature USP7_ICP0_bdg PF12436.8 ORF74503 - 0.022 14.1 1.1 0.052 12.9 1.0 1.6 1 1 1 2 2 2 0 ICP0-binding domain of Ubiquitin-specific protease 7 Prion_bPrPp PF11587.8 ORF74503 - 0.051 13.4 0.0 0.099 12.5 0.0 1.5 1 0 0 1 1 1 0 Major prion protein bPrPp - N terminal Borrelia_orfD PF02999.14 ORF74503 - 0.068 13.5 0.2 0.1 12.9 0.2 1.3 1 0 0 1 1 1 0 Borrelia orf-D family PIN_12 PF16289.5 ORF72437 - 1.7 9.1 9.9 2.5 8.6 8.9 1.8 1 1 0 1 1 1 0 PIN domain zf-LSD1 PF06943.12 ORF71862 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger zf-C3HC4 PF00097.25 ORF68432 - 3.9e-05 23.4 2.4 3.9e-05 23.4 2.4 3.7 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF68432 - 0.00023 20.9 1.5 0.00023 20.9 1.5 3.1 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF68432 - 0.00037 20.8 1.7 0.00037 20.8 1.7 3.6 5 0 0 5 5 5 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF68432 - 0.0012 18.8 0.6 0.0012 18.8 0.6 3.8 3 1 0 3 3 3 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF68432 - 0.046 13.6 1.2 0.046 13.6 1.2 3.5 4 0 0 4 4 4 0 Zinc finger, C3HC4 type (RING finger) DUF3627 PF12299.8 ORF68432 - 0.13 12.3 2.7 0.36 10.9 0.2 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3627) IBR PF01485.21 ORF68432 - 2.1 8.6 19.5 0.13 12.5 2.3 3.9 3 2 0 3 3 3 0 IBR domain, a half RING-finger domain TLD PF07534.16 ORF67713 - 7e-33 113.8 8.4 8.1e-33 113.6 8.4 1.0 1 0 0 1 1 1 1 TLD EF1G PF00647.19 ORF67713 - 0.027 14.5 1.4 0.059 13.4 1.0 1.9 1 1 0 1 1 1 0 Elongation factor 1 gamma, conserved domain CAP_N PF01213.19 ORF67390 - 1.5 8.2 3.5 2.2 7.7 3.5 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal LicD PF04991.13 ORF66100 - 1.3 9.1 10.1 5.1 7.2 10.1 1.8 1 1 0 1 1 1 0 LicD family DUF4820 PF16091.5 ORF66100 - 2.9 7.2 7.9 3.6 6.9 7.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Kri1 PF05178.12 ORF65138 - 0.69 10.5 5.8 6.9 7.3 2.1 2.6 2 1 0 2 2 2 0 KRI1-like family PanZ PF12568.8 ORF61189 - 5.3e-06 26.2 1.4 6 6.6 0.0 4.9 5 0 0 5 5 5 2 Acetyltransferase (GNAT) domain, PanZ COMM_domain PF07258.14 ORF61189 - 1.7e-05 24.9 1.6 6.9 6.9 0.0 5.0 1 1 4 5 5 5 2 COMM domain DUF3692 PF12469.8 ORF61189 - 0.015 15.5 0.2 71 3.7 0.0 3.8 4 0 0 4 4 4 0 CRISPR-associated protein CN_hydrolase PF00795.22 ORF61189 - 0.16 11.3 1.2 1.3 8.2 0.9 2.5 1 1 1 2 2 2 0 Carbon-nitrogen hydrolase RL10P_insert PF17777.1 ORF61189 - 0.16 12.0 0.1 43 4.2 0.0 3.0 2 2 1 3 3 3 0 Insertion domain in 60S ribosomal protein L10P Alginate_exp PF13372.6 ORF61189 - 0.2 10.3 0.1 10 4.7 0.0 2.2 2 0 0 2 2 2 0 Alginate export Flu_C_NS2 PF03555.14 ORF60948 - 0.013 15.6 1.0 0.05 13.8 0.6 2.2 2 0 0 2 2 2 0 Influenza C non-structural protein (NS2) AP3D1 PF06375.11 ORF60948 - 0.21 11.8 8.4 0.2 11.9 7.9 1.3 1 1 0 1 1 1 0 AP-3 complex subunit delta-1 LSR PF05624.14 ORF60012 - 2 8.5 7.0 0.12 12.4 1.3 1.8 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) U83 PF17465.2 ORF58404 - 0.9 9.7 9.9 4.5 7.5 8.2 2.3 1 1 1 2 2 2 0 Chemokine-like protein, HHV-6 U83 gene product ubiquitin PF00240.23 ORF58202 - 0.0001 22.0 0.5 0.00052 19.7 0.0 2.0 2 0 0 2 2 2 1 Ubiquitin family DUF4130 PF13566.6 ORF57455 - 0.6 10.2 4.6 0.76 9.8 4.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4130 Pox_F17 PF04767.12 ORF55128 - 0.12 12.9 3.4 0.46 11.0 1.3 2.1 2 0 0 2 2 2 0 DNA-binding 11 kDa phosphoprotein DUF677 PF05055.12 ORF55128 - 0.29 10.0 0.1 0.4 9.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF677) TP1 PF02079.16 ORF54547 - 0.13 12.2 2.8 0.23 11.4 2.3 1.7 2 0 0 2 2 2 0 Nuclear transition protein 1 zf-TAZ PF02135.16 ORF53184 - 0.25 11.8 6.4 0.046 14.2 2.4 1.8 2 0 0 2 2 2 0 TAZ zinc finger Phlebovirus_G1 PF07243.11 ORF52803 - 0.076 11.4 0.0 0.094 11.1 0.0 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 zf-RING_UBOX PF13445.6 ORF52542 - 1.2e-08 34.9 11.1 1.4e-06 28.2 7.0 2.7 2 0 0 2 2 2 2 RING-type zinc-finger zf-RING_2 PF13639.6 ORF52542 - 2.9e-06 27.5 8.1 2.9e-06 27.5 8.1 2.6 2 1 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 ORF52542 - 7.2e-06 25.8 9.6 7.2e-06 25.8 9.6 3.0 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF52542 - 1.6e-05 24.7 8.6 1.6e-05 24.7 8.6 2.7 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF52542 - 5.3e-05 23.1 9.8 5.3e-05 23.1 9.8 3.0 2 1 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF52542 - 0.00017 21.7 2.3 0.00017 21.7 2.3 3.5 4 0 0 4 4 4 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF52542 - 0.00025 20.8 8.1 0.00025 20.8 8.1 3.2 2 2 1 3 3 3 1 Prokaryotic RING finger family 4 zf-B_box PF00643.24 ORF52542 - 0.00025 21.1 5.4 0.00025 21.1 5.4 3.7 3 1 1 4 4 4 2 B-box zinc finger zf-rbx1 PF12678.7 ORF52542 - 0.0014 18.9 6.1 0.0014 18.9 6.1 2.4 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF52542 - 0.002 17.9 12.4 0.002 17.9 12.4 3.5 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) DZR PF12773.7 ORF52542 - 1.5 8.9 15.2 0.12 12.4 5.9 2.9 2 1 0 2 2 2 0 Double zinc ribbon zf-RING_6 PF14835.6 ORF52542 - 3.7 7.5 11.1 0.29 11.0 2.0 2.6 2 1 0 2 2 2 0 zf-RING of BARD1-type protein IBR PF01485.21 ORF52542 - 6.9 7.0 25.0 25 5.2 9.2 3.5 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain zf-C3HC4_5 PF17121.5 ORF52542 - 9.6 6.2 12.2 0.43 10.5 5.4 2.3 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Pkinase PF00069.25 ORF50789 - 9.1e-10 38.3 0.0 1.3e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF50789 - 0.00034 20.0 0.0 0.00052 19.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF50789 - 0.14 11.4 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 Kinase-like DUF218 PF02698.17 ORF50587 - 9.7e-12 45.0 0.0 1.5e-11 44.4 0.0 1.3 1 1 0 1 1 1 1 DUF218 domain P-mevalo_kinase PF04275.14 ORF49440 - 0.0012 18.8 3.2 0.0017 18.3 2.7 1.5 1 1 0 1 1 1 1 Phosphomevalonate kinase DUF4420 PF14390.6 ORF49440 - 0.0016 17.8 0.1 0.0019 17.5 0.1 1.1 1 0 0 1 1 1 1 Putative PD-(D/E)XK family member, (DUF4420) Mt_ATP-synt_D PF05873.12 ORF49440 - 0.013 15.3 2.1 0.024 14.5 2.1 1.4 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) Cad PF03596.13 ORF49440 - 0.052 13.4 0.0 0.071 13.0 0.0 1.2 1 0 0 1 1 1 0 Cadmium resistance transporter zf-B_box PF00643.24 ORF49440 - 0.17 12.1 8.9 0.28 11.4 8.9 1.4 1 0 0 1 1 1 0 B-box zinc finger WXG100 PF06013.12 ORF49440 - 0.19 12.0 0.7 2.2 8.6 0.7 2.2 1 1 0 1 1 1 0 Proteins of 100 residues with WXG HIP1_clath_bdg PF16515.5 ORF49440 - 0.2 12.3 3.4 0.47 11.1 3.4 1.5 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 YtxH PF12732.7 ORF49440 - 0.33 11.5 2.1 0.57 10.8 2.1 1.5 1 1 0 1 1 1 0 YtxH-like protein TCR PF03638.15 ORF48315 - 4.3e-21 74.9 60.6 2e-11 44.0 22.9 2.3 2 0 0 2 2 2 2 Tesmin/TSO1-like CXC domain, cysteine-rich domain DUF3289 PF11692.8 ORF48315 - 0.013 15.1 0.1 0.013 15.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3289) T4_Rnl2_C PF18043.1 ORF48315 - 0.068 13.3 4.9 0.17 12.1 0.0 2.5 2 1 1 3 3 3 0 T4 RNA ligase 2 C-terminal ETRAMP PF09716.10 ORF48315 - 0.88 9.7 5.0 0.29 11.2 1.7 1.9 1 1 1 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Tubulin_C PF03953.17 ORF47633 - 1.5e-05 25.2 0.0 2e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 Tubulin C-terminal domain Phage_stabilise PF11134.8 ORF47633 - 0.13 11.0 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Phage stabilisation protein DUF2070 PF09843.9 ORF44636 - 4 5.6 22.2 4.8 5.4 22.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) zf-LSD1 PF06943.12 ORF435 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger Myb_DNA-binding PF00249.31 ORF40840 - 0.0028 17.8 0.1 0.0055 16.9 0.1 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Rb_C PF08934.10 ORF40840 - 0.012 15.4 2.6 0.45 10.3 0.1 2.3 2 1 0 2 2 2 0 Rb C-terminal domain Apq12 PF12716.7 ORF40230 - 4.9 7.2 11.9 0.91 9.5 8.3 1.6 2 0 0 2 2 2 0 Nuclear pore assembly and biogenesis DUF1822 PF08852.11 ORF38967 - 0.13 11.3 0.0 0.18 10.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1822) YccV-like PF08755.11 ORF37956 - 1.5e-07 31.8 0.0 2.5e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 Hemimethylated DNA-binding protein YccV like DUF3306 PF11748.8 ORF37878 - 1.3 9.9 5.3 1.8 9.4 5.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3306) Alpha-amylase PF00128.24 ORF36785 - 0.036 13.6 0.0 0.069 12.7 0.0 1.4 1 0 0 1 1 1 0 Alpha amylase, catalytic domain Sec20 PF03908.13 ORF35948 - 0.0014 18.5 0.6 0.0028 17.5 0.1 1.8 2 0 0 2 2 2 1 Sec20 LMBR1 PF04791.16 ORF35948 - 0.0027 16.7 4.1 0.0029 16.6 4.1 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein DUF3810 PF12725.7 ORF35948 - 0.034 13.5 0.6 0.081 12.3 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3810) SNARE PF05739.19 ORF35948 - 0.041 13.9 0.1 0.041 13.9 0.1 2.3 3 0 0 3 3 3 0 SNARE domain DUF4407 PF14362.6 ORF35948 - 0.062 12.6 3.4 0.076 12.4 3.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF603 PF04645.12 ORF33773 - 0.019 14.6 0.2 0.027 14.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF603 DUF2809 PF10990.8 ORF33773 - 0.13 12.9 0.0 0.21 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2809) Fe-S_biosyn PF01521.20 ORF27525 - 7.3e-15 55.1 1.0 1.1e-14 54.6 1.0 1.2 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis Peptidase_S24 PF00717.23 ORF26191 - 4.7e-07 29.7 0.1 7.5e-07 29.0 0.1 1.4 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 ORF26191 - 0.0024 17.7 0.0 0.008 16.0 0.0 1.8 1 1 1 2 2 2 1 Signal peptidase, peptidase S26 Prenyltrans PF00432.21 ORF23289 - 0.021 14.5 0.0 0.71 9.7 0.0 2.4 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat DUF5069 PF16798.5 ORF22091 - 0.081 13.1 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5069) ANAPC4_WD40 PF12894.7 ORF21390 - 5.5e-09 36.2 0.2 0.00083 19.6 0.0 3.3 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF21390 - 7.9e-09 36.0 0.3 4.5e-07 30.5 0.0 3.2 3 1 1 4 4 4 1 WD domain, G-beta repeat Coatomer_WDAD PF04053.14 ORF21390 - 0.038 13.0 0.0 1.9 7.4 0.0 2.1 1 1 1 2 2 2 0 Coatomer WD associated region Mersacidin PF16934.5 ORF21390 - 0.16 11.8 2.5 0.5 10.2 0.0 2.5 2 1 0 2 2 2 0 Two-component Enterococcus faecalis cytolysin (EFC) DivIC PF04977.15 ORF19563 - 0.0011 18.7 20.3 0.0046 16.7 5.2 2.6 1 1 1 2 2 2 2 Septum formation initiator DUF812 PF05667.11 ORF19563 - 0.0026 16.8 23.6 0.0033 16.4 23.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) DUF3450 PF11932.8 ORF19563 - 0.0085 15.4 8.4 0.0085 15.4 8.4 2.3 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) Bacillus_HBL PF05791.11 ORF19563 - 0.025 14.4 14.0 0.16 11.8 2.8 2.4 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) MetOD2 PF18548.1 ORF19563 - 0.13 12.3 19.3 3.6 7.8 6.1 3.3 3 1 0 3 3 3 0 Metanogen output domain 2 Atg14 PF10186.9 ORF19563 - 0.16 11.0 15.0 0.21 10.7 15.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5082 PF16888.5 ORF19563 - 0.19 12.0 25.3 0.36 11.1 6.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) Fib_alpha PF08702.10 ORF19563 - 0.43 10.8 21.9 0.058 13.6 8.9 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Wtap PF17098.5 ORF19563 - 0.67 9.9 19.4 2.6 8.0 6.2 2.5 1 1 1 2 2 2 0 WTAP/Mum2p family FlaC_arch PF05377.11 ORF19563 - 0.74 10.2 22.7 0.15 12.5 4.7 3.8 2 2 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF1192 PF06698.11 ORF19563 - 0.77 9.9 11.0 12 6.1 0.4 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1192) CENP-F_leu_zip PF10473.9 ORF19563 - 0.94 9.5 30.6 0.069 13.2 15.1 3.0 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SOGA PF11365.8 ORF19563 - 1.1 10.4 18.0 0.19 12.9 13.0 2.1 1 1 1 2 2 2 0 Protein SOGA TSC22 PF01166.18 ORF19563 - 1.4 9.3 15.2 0.66 10.3 3.2 3.2 2 2 2 4 4 4 0 TSC-22/dip/bun family SlyX PF04102.12 ORF19563 - 1.6 9.4 17.6 6.4 7.5 8.4 2.8 1 1 1 2 2 2 0 SlyX Spc7 PF08317.11 ORF19563 - 1.7 7.5 27.1 2.1 7.2 23.4 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein Cluap1 PF10234.9 ORF19563 - 2.9 7.2 23.0 4.7 6.5 6.1 2.1 1 1 1 2 2 2 0 Clusterin-associated protein-1 Tup_N PF08581.10 ORF19563 - 4 7.8 24.7 3.9 7.8 4.8 3.4 1 1 2 4 4 4 0 Tup N-terminal DUF4200 PF13863.6 ORF19563 - 4.2 7.8 28.0 26 5.2 9.4 2.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4200) DUF2203 PF09969.9 ORF19563 - 4.9 7.9 12.1 48 4.7 12.1 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Spc29 PF17082.5 ORF19563 - 5 6.9 18.3 44 3.8 15.2 2.6 1 1 0 2 2 2 0 Spindle Pole Component 29 TMF_DNA_bd PF12329.8 ORF19563 - 5.3 7.1 33.1 1.2 9.2 25.7 3.3 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding CorA PF01544.18 ORF19563 - 5.7 6.2 12.5 61 2.8 0.0 2.0 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF1664 PF07889.12 ORF19563 - 6.2 6.9 16.3 9 6.4 11.9 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Cnn_1N PF07989.11 ORF19563 - 6.6 7.0 23.5 4.2 7.6 5.8 2.6 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 bZIP_2 PF07716.15 ORF19563 - 8.1 6.6 19.8 7.1 6.8 3.8 2.9 2 1 0 2 2 2 0 Basic region leucine zipper TMPIT PF07851.13 ORF19563 - 9.1 5.4 19.0 5.1 6.2 16.1 1.7 1 1 0 2 2 2 0 TMPIT-like protein DUF1295 PF06966.12 ORF16997 - 4.5e-17 62.4 1.2 5.4e-17 62.1 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) DUF996 PF06195.13 ORF16997 - 0.018 15.3 5.3 0.14 12.5 5.3 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF996) Sigma70_r4_2 PF08281.12 ORF16474 - 3.5e-15 55.4 0.4 7e-15 54.4 0.0 1.7 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 ORF16474 - 3.2e-12 46.0 0.2 5.2e-12 45.4 0.2 1.3 1 0 0 1 1 1 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 ORF16474 - 2.1e-08 33.5 0.0 4.4e-08 32.5 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 ORF16474 - 5.7e-05 23.1 0.1 0.00013 21.9 0.1 1.5 1 1 0 1 1 1 1 ECF sigma factor HTH_24 PF13412.6 ORF16474 - 0.00041 19.8 0.0 0.0008 18.9 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 ORF16474 - 0.00045 19.9 0.0 0.0011 18.7 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain PCI PF01399.27 ORF16474 - 0.0039 17.7 0.0 0.0069 16.9 0.0 1.4 1 0 0 1 1 1 1 PCI domain GerE PF00196.19 ORF16474 - 0.0082 15.7 0.0 0.019 14.5 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_11 PF08279.12 ORF16474 - 0.015 15.2 0.0 0.03 14.3 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_36 PF13730.6 ORF16474 - 0.019 14.9 0.0 0.041 13.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_40 PF14493.6 ORF16474 - 0.025 15.0 0.0 0.062 13.8 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain TnsD PF15978.5 ORF16474 - 0.025 13.6 0.0 0.045 12.7 0.0 1.4 1 0 0 1 1 1 0 Tn7-like transposition protein D MarR_2 PF12802.7 ORF16474 - 0.037 13.9 0.0 0.085 12.8 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 ORF16474 - 0.058 13.5 0.0 0.13 12.4 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 ORF16474 - 0.079 13.0 0.1 0.21 11.7 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_Mga PF08280.11 ORF16474 - 0.085 12.9 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_IclR PF09339.10 ORF16474 - 0.12 12.2 0.1 0.27 11.0 0.0 1.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_10 PF04967.12 ORF16474 - 0.12 12.1 0.0 0.3 10.9 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain BRK PF07533.16 ORF16092 - 0.048 13.3 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 BRK domain Ank_3 PF13606.6 ORF151545 - 2.2e-09 36.8 0.0 0.0023 18.3 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_2 PF12796.7 ORF151545 - 1.5e-07 31.9 0.0 2.9e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF151545 - 3.4e-07 30.4 0.0 0.0056 17.1 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF151545 - 6.2e-06 26.7 0.0 1.3e-05 25.6 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF151545 - 0.00054 20.2 0.2 0.019 15.3 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF150853 - 0.0022 18.2 0.0 0.0041 17.4 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF150853 - 0.0034 17.9 0.0 0.76 10.4 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF150853 - 0.016 15.6 0.0 2 9.0 0.0 2.4 2 0 0 2 2 2 0 Ankyrin repeat Ank_4 PF13637.6 ORF150853 - 0.033 14.8 0.0 27 5.5 0.0 3.1 2 1 0 2 2 2 0 Ankyrin repeats (many copies) APAF1_C PF17908.1 ORF149469 - 0.005 16.8 0.6 0.0073 16.3 0.6 1.3 1 0 0 1 1 1 1 APAF-1 helical domain ApoLp-III PF07464.11 ORF149469 - 0.049 13.7 0.6 0.067 13.3 0.6 1.2 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) BRK PF07533.16 ORF149309 - 0.048 13.3 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 BRK domain zf-LSD1 PF06943.12 ORF145422 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger YajC PF02699.15 ORF142888 - 0.02 14.8 0.5 0.033 14.1 0.5 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit TadE PF07811.12 ORF142888 - 9.9 6.5 8.0 18 5.7 8.0 1.5 1 1 0 1 1 1 0 TadE-like protein PLAC8 PF04749.17 ORF141803 - 2.3e-10 41.3 0.9 3.7e-10 40.7 0.9 1.3 1 0 0 1 1 1 1 PLAC8 family DUF4812 PF16071.5 ORF141803 - 0.084 12.7 0.1 0.62 9.9 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4812) DUF5437 PF17505.2 ORF141078 - 0.23 11.5 0.0 0.23 11.5 0.0 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5437) zf-TAZ PF02135.16 ORF137402 - 0.25 11.8 6.4 0.046 14.2 2.4 1.8 2 0 0 2 2 2 0 TAZ zinc finger Inv-AAD PF18785.1 ORF137031 - 0.086 12.7 1.7 3 7.7 0.1 2.3 1 1 1 2 2 2 0 Invertebrate-AID/APOBEC-deaminase Lon_C PF05362.13 ORF136452 - 2.5e-42 144.8 0.0 2.9e-42 144.5 0.0 1.1 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain ChlI PF13541.6 ORF136452 - 1.6e-05 24.7 0.0 1.9e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase DUF2046 PF09755.9 ORF133730 - 0.015 14.6 3.8 0.019 14.2 3.8 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) SLATT_5 PF18160.1 ORF133730 - 0.15 11.3 5.4 0.17 11.2 4.8 1.5 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 DUF4298 PF14131.6 ORF133730 - 0.26 11.3 3.3 0.73 9.8 0.9 2.4 1 1 2 3 3 3 0 Domain of unknown function (DUF4298) SmAKAP PF15127.6 ORF133659 - 9.5 7.5 9.1 65 4.8 9.1 2.3 1 1 0 1 1 1 0 Small membrane A-kinase anchor protein Metallophos_2 PF12850.7 ORF130576 - 0.0093 16.2 0.0 0.016 15.4 0.0 1.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 ORF130576 - 0.07 13.6 0.0 0.14 12.6 0.0 1.5 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase DUF3410 PF11890.8 ORF130340 - 0.11 12.4 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) UBA_4 PF14555.6 ORF13032 - 0.08 12.8 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 UBA-like domain Tctex-1 PF03645.13 ORF129683 - 1.7e-12 47.5 0.0 2.6e-12 46.9 0.0 1.3 1 0 0 1 1 1 1 Tctex-1 family Calreticulin PF00262.18 ORF129599 - 0.22 10.3 0.4 0.27 10.0 0.4 1.1 1 0 0 1 1 1 0 Calreticulin family Tox-HDC PF15656.6 ORF129501 - 0.035 14.3 1.9 0.068 13.4 1.9 1.4 1 0 0 1 1 1 0 Toxin with a H, D/N and C signature IQ PF00612.27 ORF129333 - 0.097 12.5 0.3 0.23 11.4 0.3 1.7 1 0 0 1 1 1 0 IQ calmodulin-binding motif DUF5344 PF17279.2 ORF128930 - 0.088 13.4 0.3 0.14 12.7 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5344) HasA PF06438.12 ORF128930 - 0.1 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Heme-binding protein A (HasA) FadA PF09403.10 ORF128930 - 0.1 13.1 0.2 0.16 12.4 0.2 1.2 1 0 0 1 1 1 0 Adhesion protein FadA Disintegrin PF00200.23 ORF128930 - 0.64 10.9 5.7 0.93 10.3 5.7 1.2 1 0 0 1 1 1 0 Disintegrin zf-B_box PF00643.24 ORF128930 - 2.3 8.4 15.0 0.25 11.5 10.7 1.6 2 0 0 2 2 2 0 B-box zinc finger FA_desaturase PF00487.24 ORF128571 - 0.063 13.1 8.1 0.086 12.7 8.1 1.4 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF128571 - 1.3 8.6 13.8 1.6 8.4 13.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2207 PF09972.9 ORF128571 - 7 5.3 11.3 8.9 4.9 11.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ribosomal_L6 PF00347.23 ORF128423 - 1.9e-40 137.4 0.2 7.6e-19 68.2 0.0 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 TSC22 PF01166.18 ORF126416 - 0.0001 22.5 1.7 0.00028 21.1 1.7 1.7 1 0 0 1 1 1 1 TSC-22/dip/bun family KASH_CCD PF14662.6 ORF126416 - 0.00011 22.1 10.6 0.00016 21.5 10.6 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Shugoshin_N PF07558.11 ORF126416 - 0.00055 19.7 1.3 0.0013 18.5 1.3 1.7 1 0 0 1 1 1 1 Shugoshin N-terminal coiled-coil region YabA PF06156.13 ORF126416 - 0.0015 19.1 5.1 0.0015 19.1 5.1 2.0 1 1 1 2 2 2 1 Initiation control protein YabA DUF4094 PF13334.6 ORF126416 - 0.17 12.3 2.8 0.3 11.5 0.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) DivIC PF04977.15 ORF126416 - 2.1 8.2 11.5 0.23 11.3 4.2 2.9 2 2 1 3 3 3 0 Septum formation initiator Ferlin_C PF16165.5 ORF125233 - 0.61 10.0 2.6 3.6 7.5 0.9 2.0 2 0 0 2 2 2 0 Ferlin C-terminus MFS_1 PF07690.16 ORF124463 - 1.2e-06 27.7 24.2 1.4e-06 27.5 24.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily UbiA PF01040.18 ORF124463 - 4.1 6.6 18.1 73 2.5 17.6 2.2 1 1 0 1 1 1 0 UbiA prenyltransferase family GCP_C_terminal PF04130.13 ORF123628 - 0.035 13.6 4.1 0.045 13.2 4.1 1.2 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal zf-ZPR1 PF03367.13 ORF123628 - 0.39 10.5 13.0 0.15 11.9 8.5 1.9 1 1 1 2 2 2 0 ZPR1 zinc-finger domain Sugar_tr PF00083.24 ORF12355 - 3.4e-19 69.0 1.1 3.7e-19 68.9 1.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF12355 - 6.8e-07 28.5 0.7 7.3e-07 28.4 0.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily P-mevalo_kinase PF04275.14 ORF119471 - 0.00052 19.9 1.8 0.00086 19.2 1.8 1.5 1 1 0 1 1 1 1 Phosphomevalonate kinase DUF4420 PF14390.6 ORF119471 - 0.01 15.1 0.2 0.012 14.9 0.2 1.1 1 0 0 1 1 1 0 Putative PD-(D/E)XK family member, (DUF4420) Cytochrom_B562 PF07361.11 ORF119471 - 0.06 14.0 0.1 0.13 12.9 0.1 1.5 1 0 0 1 1 1 0 Cytochrome b562 Cad PF03596.13 ORF119471 - 0.13 12.1 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Cadmium resistance transporter zf-B_box PF00643.24 ORF119471 - 0.17 12.0 8.9 0.28 11.4 8.9 1.3 1 0 0 1 1 1 0 B-box zinc finger Elicitin PF00964.17 ORF11895 - 0.0086 16.2 0.4 0.017 15.2 0.0 1.8 2 0 0 2 2 2 1 Elicitin FUSC PF04632.12 ORF117716 - 0.087 11.4 1.0 0.1 11.1 1.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family CDCA PF18484.1 ORF117212 - 0.061 13.2 0.9 0.061 13.2 0.9 1.5 2 0 0 2 2 2 0 Cadmium carbonic anhydrase repeat zf-LSD1 PF06943.12 ORF116866 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger Sugar_tr PF00083.24 ORF116465 - 3.4e-19 69.0 1.1 3.7e-19 68.9 1.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF116465 - 6.8e-07 28.5 0.7 7.3e-07 28.4 0.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Peptidase_C1 PF00112.23 ORF115194 - 4.7e-17 62.8 0.6 7.1e-14 52.4 0.1 2.1 1 1 1 2 2 2 2 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF115194 - 0.11 11.3 0.3 0.15 10.8 0.2 1.4 1 1 0 1 1 1 0 Peptidase C1-like family zf-LSD1 PF06943.12 ORF113759 - 1.5 8.7 10.0 0.77 9.7 1.0 3.8 3 0 0 3 3 3 0 LSD1 zinc finger Totivirus_coat PF05518.11 ORF112903 - 0.49 8.4 3.8 0.62 8.1 3.8 1.0 1 0 0 1 1 1 0 Totivirus coat protein NOA36 PF06524.12 ORF112490 - 0.2 10.9 2.6 0.28 10.5 2.6 1.2 1 0 0 1 1 1 0 NOA36 protein DUF4611 PF15387.6 ORF112490 - 4.1 7.7 9.4 8.1 6.7 9.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4611) DUF2229 PF09989.9 ORF109543 - 0.0088 15.7 0.5 0.0088 15.7 0.5 1.8 2 0 0 2 2 2 1 CoA enzyme activase uncharacterised domain (DUF2229) PBP_like_2 PF12849.7 ORF109543 - 0.036 13.7 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 PBP superfamily domain MFS_1 PF07690.16 ORF108450 - 0.0056 15.7 9.1 0.0094 14.9 9.1 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Prominin PF05478.11 ORF108450 - 0.1 10.5 1.2 0.12 10.3 1.2 1.2 1 0 0 1 1 1 0 Prominin DUF3382 PF11862.8 ORF108450 - 0.79 10.0 6.3 33 4.8 0.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3382) PPR PF01535.20 ORF106616 - 3e-08 33.4 3.9 0.00098 19.2 0.2 3.3 3 0 0 3 3 3 2 PPR repeat PPR_2 PF13041.6 ORF106616 - 0.00057 20.0 2.2 0.48 10.7 0.1 3.2 2 1 1 3 3 3 2 PPR repeat family PPR_long PF17177.4 ORF106616 - 0.034 13.5 0.0 4.5 6.6 0.0 1.7 1 1 1 2 2 2 0 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 ORF106616 - 0.06 13.4 0.0 0.64 10.1 0.0 2.2 1 1 1 2 2 2 0 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF106616 - 0.07 12.8 0.0 0.38 10.5 0.0 2.1 2 0 0 2 2 2 0 PPR repeat DNase-RNase PF02577.14 ORF105849 - 0.19 11.4 0.1 0.29 10.8 0.1 1.3 1 0 0 1 1 1 0 Bifunctional nuclease LssY_C PF14067.6 ORF10467 - 0.2 11.2 0.0 0.29 10.7 0.0 1.2 1 0 0 1 1 1 0 LssY C-terminus Seipin PF06775.14 ORF10313 - 0.00024 21.3 0.1 0.00034 20.8 0.1 1.2 1 0 0 1 1 1 1 Putative adipose-regulatory protein (Seipin) Phage_Gp23 PF10669.9 ORF100439 - 0.016 15.5 2.1 0.1 13.0 1.2 2.1 2 0 0 2 2 2 0 Protein gp23 (Bacteriophage A118) AveC_like PF17198.4 NODE_39681_length_526_cov_2.150713_g32261_i0forward_frame_1 - 0.069 12.6 0.1 0.11 11.9 0.1 1.2 1 0 0 1 1 1 0 Spirocyclase AveC-like LRR19-TM PF15176.6 NODE_39681_length_526_cov_2.150713_g32261_i0forward_frame_1 - 0.11 12.5 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Cadherin_C_2 PF16492.5 NODE_39681_length_526_cov_2.150713_g32261_i0forward_frame_1 - 0.45 11.3 2.9 13 6.6 0.1 2.2 1 1 1 2 2 2 0 Cadherin cytoplasmic C-terminal DUF2510 PF10708.9 NODE_39657_length_526_cov_130.906314_g32237_i0reverse_frame_1 - 0.068 12.9 0.5 0.19 11.5 0.5 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2510) MASE3 PF17159.4 NODE_39651_length_526_cov_163.804481_g32232_i0forward_frame_1 - 0.0042 16.7 2.8 0.0055 16.4 2.8 1.2 1 0 0 1 1 1 1 Membrane-associated sensor domain SWIM PF04434.17 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_1 - 4.3e-05 23.1 39.2 0.21 11.3 1.7 5.4 5 0 0 5 5 5 5 SWIM zinc finger Orexin_rec2 PF03827.13 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_1 - 0.0032 17.4 0.1 30 4.7 0.0 4.4 3 2 2 5 5 5 2 Orexin receptor type 2 CVNH PF08881.10 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_1 - 5 7.9 8.3 35 5.2 0.1 3.8 1 1 3 4 4 4 0 CVNH domain Ribosomal_L37ae PF01780.19 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_1 - 2.6e-09 37.1 1.5 6.6 6.9 0.0 5.2 5 0 0 5 5 5 5 Ribosomal L37ae protein family DUF3692 PF12469.8 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_1 - 7.9 6.7 7.0 26 5.1 0.2 2.8 3 0 0 3 3 3 0 CRISPR-associated protein DNA_pol_lambd_f PF10391.9 NODE_39645_length_526_cov_216.714868_g32227_i0reverse_frame_1 - 0.098 12.5 7.6 0.23 11.3 1.8 3.4 2 2 1 3 3 3 0 Fingers domain of DNA polymerase lambda Vma12 PF11712.8 NODE_39645_length_526_cov_216.714868_g32227_i0reverse_frame_1 - 3.3 7.8 5.4 9.2 6.3 5.4 2.0 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase TPR_MLP1_2 PF07926.12 NODE_39645_length_526_cov_216.714868_g32227_i0reverse_frame_1 - 4.7 7.3 15.3 0.69 10.0 11.0 1.8 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein FUSC PF04632.12 NODE_39645_length_526_cov_216.714868_g32227_i0reverse_frame_1 - 5.7 5.3 8.1 9.2 4.7 8.1 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein family Toxin_34 PF08396.10 NODE_39644_length_526_cov_229.004073_g32226_i0forward_frame_1 - 0.91 10.3 12.4 0.11 13.2 6.2 2.2 2 0 0 2 2 2 0 Spider toxin omega agatoxin/Tx1 family TetR_C_6 PF13977.6 NODE_39620_length_527_cov_77.266260_g32202_i0forward_frame_1 - 0.4 10.9 2.8 2.5 8.3 0.2 2.2 2 0 0 2 2 2 0 BetI-type transcriptional repressor, C-terminal 60KD_IMP PF02096.20 NODE_39591_length_527_cov_323.628049_g32175_i0forward_frame_1 - 0.0034 17.3 0.7 0.0048 16.8 0.7 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein MFS_Mycoplasma PF07672.13 NODE_39584_length_528_cov_2.176471_g32170_i0forward_frame_1 - 4.9e-06 26.0 6.5 5.8e-06 25.8 6.5 1.2 1 0 0 1 1 1 1 Mycoplasma MFS transporter Orexin_rec2 PF03827.13 NODE_39581_length_528_cov_2.626775_g32167_i0reverse_frame_1 - 0.12 12.4 0.1 0.24 11.4 0.1 1.5 1 0 0 1 1 1 0 Orexin receptor type 2 TPR_17 PF13431.6 NODE_39566_length_528_cov_86.446247_g32153_i0forward_frame_1 - 0.076 13.4 0.2 0.29 11.6 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Joubert PF15392.6 NODE_39558_length_528_cov_124.154158_g32145_i0forward_frame_1 - 1.1 8.9 3.5 1.3 8.7 3.5 1.1 1 0 0 1 1 1 0 Joubert syndrome-associated WD40 PF00400.32 NODE_39540_length_529_cov_1.607287_g32129_i0forward_frame_3 - 7.3e-10 39.3 2.6 9e-05 23.2 0.2 2.8 3 0 0 3 3 3 2 WD domain, G-beta repeat BTB_2 PF02214.22 NODE_39539_length_529_cov_1.979757_g32128_i0forward_frame_2 - 0.036 14.4 1.2 0.12 12.7 1.2 2.1 1 1 0 1 1 1 0 BTB/POZ domain NIF PF03031.18 NODE_39538_length_529_cov_2.200405_g32127_i0forward_frame_3 - 7.2e-50 168.8 0.1 8.2e-50 168.6 0.1 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF3367 PF11847.8 NODE_39531_length_529_cov_3.876518_g32120_i0forward_frame_3 - 0.38 8.6 2.6 0.49 8.2 2.6 1.1 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase Pkinase PF00069.25 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_2 - 2.1e-34 119.1 2.9 2.6e-34 118.8 2.9 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_2 - 1e-21 77.4 0.9 1.3e-21 77.1 0.9 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_2 - 0.0013 17.8 0.6 0.0014 17.7 0.6 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_2 - 0.051 12.9 0.1 0.068 12.5 0.1 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_2 - 0.075 12.6 0.5 0.12 12.0 0.4 1.5 1 1 0 1 1 1 0 Choline/ethanolamine kinase RIO1 PF01163.22 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_2 - 0.076 12.6 0.3 0.11 12.1 0.3 1.4 1 1 0 1 1 1 0 RIO1 family APH PF01636.23 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_2 - 0.084 12.8 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Melibiase PF02065.18 NODE_39528_length_529_cov_12.908907_g32117_i0forward_frame_2 - 0.09 11.7 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Melibiase PsbJ PF01788.17 NODE_39487_length_529_cov_3205.056680_g32080_i0reverse_frame_3 - 2.3e-09 36.9 5.1 2.3e-09 36.9 5.1 1.8 2 0 0 2 2 2 1 PsbJ UCH PF00443.29 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_3 - 0.059 12.8 1.4 0.074 12.5 1.4 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Zip PF02535.22 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_2 - 0.23 10.6 2.4 0.26 10.5 2.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Pox_polyA_pol PF03296.13 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_2 - 1.3 8.9 4.3 3.7 7.4 0.1 2.1 2 0 0 2 2 2 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Presenilin PF01080.17 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_2 - 2.4 6.8 6.1 3.2 6.4 6.1 1.2 1 0 0 1 1 1 0 Presenilin Pox_Ag35 PF03286.14 NODE_39474_length_530_cov_49.224242_g32067_i0reverse_frame_2 - 4.6 7.0 17.0 6.2 6.6 17.0 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Saf_2TM PF18303.1 NODE_39474_length_530_cov_49.224242_g32067_i0forward_frame_3 - 0.44 10.1 2.7 0.59 9.7 2.7 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain EcoRI_methylase PF13651.6 NODE_39471_length_530_cov_72.084848_g32064_i0forward_frame_3 - 0.036 13.3 0.2 0.04 13.2 0.2 1.1 1 0 0 1 1 1 0 Adenine-specific methyltransferase EcoRI Eco57I PF07669.11 NODE_39471_length_530_cov_72.084848_g32064_i0forward_frame_3 - 0.044 14.3 0.2 0.08 13.4 0.2 1.4 1 0 0 1 1 1 0 Eco57I restriction-modification methylase MTS PF05175.14 NODE_39471_length_530_cov_72.084848_g32064_i0forward_frame_3 - 0.048 13.2 0.0 0.089 12.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain DUF3332 PF11810.8 NODE_39459_length_530_cov_163.775758_g32052_i0reverse_frame_3 - 0.37 10.4 2.9 0.48 10.0 2.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) Zn_ribbon_SprT PF17283.2 NODE_39454_length_530_cov_274.781818_g32047_i0reverse_frame_3 - 0.068 13.1 6.2 3.2 7.8 0.9 2.7 2 0 0 2 2 2 0 SprT-like zinc ribbon domain SAM_1 PF00536.30 NODE_39454_length_530_cov_274.781818_g32047_i0forward_frame_3 - 0.085 13.3 0.3 2.1 8.8 0.1 2.1 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) MLANA PF14991.6 NODE_39448_length_530_cov_524.303030_g32041_i0reverse_frame_3 - 0.11 12.8 0.4 0.21 11.9 0.4 1.4 1 0 0 1 1 1 0 Protein melan-A PI3Ka PF00613.20 NODE_39448_length_530_cov_524.303030_g32041_i0forward_frame_3 - 0.066 12.6 0.0 0.098 12.1 0.0 1.2 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) LRV_FeS PF05484.11 NODE_39435_length_531_cov_3.143145_g32032_i0reverse_frame_3 - 0.086 12.9 0.2 2.6 8.1 0.1 2.3 2 0 0 2 2 2 0 LRV protein FeS4 cluster V-set_CD47 PF08204.11 NODE_39425_length_531_cov_64.544355_g32022_i0reverse_frame_2 - 0.01 15.8 0.7 0.02 14.8 0.7 1.5 1 0 0 1 1 1 0 CD47 immunoglobulin-like domain BAR PF03114.18 NODE_39416_length_531_cov_89.080645_g32013_i0reverse_frame_2 - 0.0011 18.6 0.2 0.0016 18.1 0.2 1.1 1 0 0 1 1 1 1 BAR domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks138.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks138.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks138.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks138.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:02:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3678 PF12435.8 NODE_39411_length_531_cov_106.340726_g32008_i0forward_frame_3 - 0.17 11.3 3.4 0.31 10.5 3.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) MgtE PF01769.16 NODE_39411_length_531_cov_106.340726_g32008_i0forward_frame_2 - 0.18 12.2 9.4 0.34 11.3 9.4 1.7 1 1 0 1 1 1 0 Divalent cation transporter NinF PF05810.12 NODE_39407_length_531_cov_135.235887_g32004_i0reverse_frame_3 - 0.051 13.4 4.0 20 5.2 0.0 3.3 3 0 0 3 3 3 0 NinF protein DUF3079 PF11278.8 NODE_39407_length_531_cov_135.235887_g32004_i0reverse_frame_3 - 0.14 12.0 31.7 0.21 11.4 2.4 4.9 1 1 4 5 5 5 0 Protein of unknown function (DUF3079) NCD1 PF04904.13 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_3 - 0.0035 17.3 1.4 3.6 7.7 0.0 3.5 1 1 3 4 4 4 2 NAB conserved region 1 (NCD1) DUF3400 PF11880.8 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_3 - 0.34 10.5 7.2 65 3.2 0.0 4.6 3 1 2 5 5 5 0 Domain of unknown function (DUF3400) Zn-ribbon_8 PF09723.10 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_2 - 0.12 12.5 5.3 37 4.5 0.4 4.3 2 1 3 5 5 5 0 Zinc ribbon domain Lac_bphage_repr PF06543.12 NODE_39407_length_531_cov_135.235887_g32004_i0forward_frame_2 - 1.2 9.2 2.7 22 5.1 0.1 3.5 4 0 0 4 4 4 0 Lactococcus bacteriophage repressor KdpA PF03814.15 NODE_39384_length_531_cov_38839.167339_g31984_i0forward_frame_3 - 0.18 10.0 2.2 0.22 9.7 2.2 1.0 1 0 0 1 1 1 0 Potassium-transporting ATPase A subunit GCM PF03615.15 ORF99652 - 0.013 15.4 1.2 0.013 15.4 1.2 2.5 1 1 2 3 3 3 0 GCM motif protein IL32 PF15225.6 ORF9903 - 0.073 13.4 2.2 0.14 12.5 2.2 1.5 1 0 0 1 1 1 0 Interleukin 32 Foie-gras_1 PF11817.8 ORF97966 - 0.1 12.2 1.3 0.13 11.8 0.5 1.6 2 0 0 2 2 2 0 Foie gras liver health family 1 DUF2618 PF10940.8 ORF97966 - 2.7 7.9 8.6 6.2 6.7 1.0 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) Sec62 PF03839.16 ORF9645 - 1.2 8.5 11.1 1.6 8.2 11.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 FapA PF03961.13 ORF9645 - 1.9 7.0 14.3 2.5 6.6 14.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A TPR_2 PF07719.17 ORF92953 - 0.0019 18.2 0.4 0.0034 17.4 0.4 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF92953 - 0.021 15.0 0.2 0.044 14.0 0.2 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF92953 - 0.03 14.9 0.0 0.057 14.1 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF92953 - 0.12 12.7 0.1 0.19 12.0 0.1 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4364 PF14277.6 ORF92953 - 0.12 12.1 3.5 0.088 12.5 2.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4364) TPR_14 PF13428.6 ORF92953 - 0.18 12.7 0.0 0.32 11.9 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat FAM178 PF14816.6 ORF92953 - 0.6 9.0 4.6 1 8.3 4.6 1.4 1 0 0 1 1 1 0 Family of unknown function, FAM178 CobT PF06213.12 ORF92953 - 3.7 6.9 21.1 0.025 14.0 11.2 1.9 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT DUF4770 PF15994.5 ORF92953 - 5 7.3 9.4 1.2 9.4 3.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4770) TLP-20 PF06088.11 ORF92953 - 6.1 6.7 14.4 6.6 6.6 5.8 2.2 2 0 0 2 2 2 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) Prothymosin PF03247.14 ORF92953 - 6.5 7.3 33.7 0.57 10.7 19.2 2.3 2 0 0 2 2 2 0 Prothymosin/parathymosin family GEN1_C PF18380.1 ORF92953 - 6.9 7.6 15.2 15 6.6 7.9 2.3 2 0 0 2 2 2 0 Holliday junction resolvase Gen1 C-terminal domain Acetyltransf_1 PF00583.25 ORF89897 - 6e-11 42.6 0.0 7.5e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF89897 - 5.8e-08 32.7 0.1 8.4e-08 32.2 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF89897 - 2.6e-05 24.6 0.1 3.9e-05 24.0 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF89897 - 4.3e-05 24.2 0.0 5.1e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF89897 - 0.00015 21.7 0.1 0.0007 19.5 0.1 1.9 1 1 0 2 2 2 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF89897 - 0.046 13.9 0.1 0.063 13.4 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 ORF89897 - 0.092 12.7 0.0 0.31 11.0 0.0 1.8 2 0 0 2 2 2 0 ESCO1/2 acetyl-transferase Acetyltransf_9 PF13527.7 ORF89897 - 0.1 12.7 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF5346 PF17281.2 ORF89479 - 4.6 7.3 9.8 0.33 11.0 4.7 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5346) Acetyltransf_6 PF13480.7 ORF89226 - 0.0035 17.5 1.3 0.0055 16.9 1.3 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GPR15L PF15854.5 ORF87515 - 1.7 9.0 16.0 0.27 11.5 0.7 2.8 3 1 0 3 3 3 0 G-protein coupled receptor ligand 15 EII-Sor PF03609.14 ORF86549 - 0.047 13.1 0.3 0.07 12.5 0.3 1.1 1 0 0 1 1 1 0 PTS system sorbose-specific iic component DUF676 PF05057.14 ORF85488 - 1.7e-20 73.5 0.6 3.3e-19 69.3 0.1 2.0 1 1 1 2 2 2 2 Putative serine esterase (DUF676) Ribosomal_L5_C PF00673.21 ORF85140 - 2e-20 72.8 0.0 3.8e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF85140 - 1.7e-15 57.1 0.1 2.6e-15 56.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L5 DUF1293 PF06950.11 ORF85140 - 0.094 12.8 0.1 0.81 9.8 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1293) OprD PF03573.13 ORF85140 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 outer membrane porin, OprD family DUF4253 PF14062.6 ORF84978 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) PTN_MK_C PF01091.18 ORF84584 - 0.068 13.6 0.2 0.16 12.4 0.1 1.7 2 0 0 2 2 2 0 PTN/MK heparin-binding protein family, C-terminal domain FeS_assembly_P PF01883.19 ORF84031 - 3.8e-14 52.6 0.0 8.2e-14 51.5 0.0 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein UPAR_LY6 PF00021.21 ORF82028 - 0.032 14.9 0.8 0.032 14.9 0.8 2.0 2 1 0 2 2 2 0 u-PAR/Ly-6 domain DUF3043 PF11241.8 ORF79695 - 0.2 11.7 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) MpPF26 PF07666.11 ORF79018 - 4.2 7.5 12.1 0.091 12.9 2.7 2.2 1 1 1 2 2 2 0 M penetrans paralogue family 26 RGM_C PF06534.13 ORF78901 - 0.004 16.7 0.1 0.0058 16.2 0.1 1.1 1 0 0 1 1 1 1 Repulsive guidance molecule (RGM) C-terminus Ribosomal_L5_C PF00673.21 ORF77576 - 2e-20 72.8 0.0 3.8e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF77576 - 1.7e-15 57.1 0.1 2.6e-15 56.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L5 DUF1293 PF06950.11 ORF77576 - 0.094 12.8 0.1 0.81 9.8 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1293) OprD PF03573.13 ORF77576 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 outer membrane porin, OprD family MAGE_N PF12440.8 ORF76990 - 1.1 9.9 9.2 0.19 12.4 4.7 1.9 1 1 1 2 2 2 0 Melanoma associated antigen family N terminal TLD PF07534.16 ORF76960 - 5.8e-10 39.5 0.0 7.9e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 TLD Ribosomal_60s PF00428.19 ORF76960 - 7.6 7.2 12.7 3.6 8.3 10.3 1.7 1 1 1 2 2 2 0 60s Acidic ribosomal protein DUF930 PF06059.12 ORF76706 - 0.045 14.3 0.0 0.079 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF930) DUF4116 PF13475.6 ORF76532 - 2.4e-17 62.4 0.0 3.3e-08 33.1 0.0 3.0 2 1 1 3 3 3 3 Domain of unknown function (DUF4116) Mid1 PF12929.7 ORF76532 - 0.24 10.6 0.0 0.31 10.2 0.0 1.1 1 0 0 1 1 1 0 Stretch-activated Ca2+-permeable channel component PEP-utilisers_N PF05524.13 ORF75513 - 1.3e-15 57.6 0.4 2.2e-15 56.9 0.4 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, N-terminal PEP-utilizers PF00391.23 ORF75513 - 1.2e-14 53.7 0.0 2e-14 53.0 0.0 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain DUF4253 PF14062.6 ORF73237 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) OrfB_Zn_ribbon PF07282.11 ORF73232 - 0.029 14.3 0.2 0.081 12.9 0.2 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Mcm10 PF09332.11 ORF73232 - 0.21 11.0 5.3 0.27 10.6 5.3 1.1 1 0 0 1 1 1 0 Mcm10 replication factor Peptidase_C71 PF12386.8 ORF66511 - 0.099 12.3 0.2 0.15 11.7 0.2 1.3 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei TGF_beta_GS PF08515.12 ORF65487 - 0.21 11.1 1.2 0.43 10.1 1.2 1.4 1 0 0 1 1 1 0 Transforming growth factor beta type I GS-motif Raftlin PF15250.6 ORF65328 - 0.035 12.8 0.4 0.036 12.8 0.4 1.0 1 0 0 1 1 1 0 Raftlin Pkinase PF00069.25 ORF58004 - 2.3e-05 23.9 0.0 3e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain RMP PF14996.6 ORF55693 - 2.4e-15 57.1 3.9 5.9e-15 55.8 0.6 2.4 1 1 1 2 2 2 1 Retinal Maintenance CD99L2 PF12301.8 ORF55693 - 0.073 13.4 7.5 0.14 12.5 7.5 1.4 1 0 0 1 1 1 0 CD99 antigen like protein 2 DUF5427 PF10310.9 ORF55693 - 0.14 11.1 2.2 0.17 10.8 2.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5427) DUF930 PF06059.12 ORF53931 - 0.045 14.3 0.0 0.079 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF930) Skp1 PF01466.19 ORF53769 - 6.5e-13 48.6 0.3 6.5e-13 48.6 0.3 1.8 2 0 0 2 2 2 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF53769 - 1.9e-06 27.9 0.6 4.1e-06 26.9 0.6 1.5 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain BTB PF00651.31 ORF53769 - 0.0085 16.3 0.1 3.5 7.9 0.0 2.3 1 1 1 2 2 2 2 BTB/POZ domain MpPF26 PF07666.11 ORF53013 - 7 6.8 12.9 62 3.7 12.3 2.2 1 1 0 1 1 1 0 M penetrans paralogue family 26 Autophagy_act_C PF03987.15 ORF50952 - 0.00024 21.6 0.4 0.00059 20.4 0.4 1.7 1 0 0 1 1 1 1 Autophagocytosis associated protein, active-site domain MORN PF02493.20 ORF47940 - 1.2e-10 40.6 3.8 6.5e-06 25.7 0.5 3.1 2 0 0 2 2 2 2 MORN repeat SPRY PF00622.28 ORF4711 - 1.4e-17 63.9 0.0 2.1e-17 63.4 0.0 1.2 1 0 0 1 1 1 1 SPRY domain Lebercilin PF15619.6 ORF42928 - 0.0089 15.7 26.4 0.015 15.0 10.6 2.6 1 1 1 2 2 2 2 Ciliary protein causing Leber congenital amaurosis disease TEX12 PF15219.6 ORF42928 - 0.43 10.9 9.5 0.096 13.0 3.5 2.3 2 1 0 2 2 2 0 Testis-expressed 12 NYD-SP28 PF14772.6 ORF42928 - 1.9 8.6 21.8 0.14 12.2 8.5 3.4 1 1 2 3 3 3 0 Sperm tail Uso1_p115_C PF04871.13 ORF42928 - 3.4 8.1 20.6 0.9 9.9 6.8 2.3 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Fib_alpha PF08702.10 ORF42928 - 6.3 7.0 24.5 2.1 8.5 7.2 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF4446 PF14584.6 ORF42928 - 6.8 6.7 15.6 0.54 10.2 5.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) DUF4253 PF14062.6 ORF4199 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) Jas PF16135.5 ORF41002 - 8.6 6.6 8.8 2.7 8.2 1.3 2.3 2 0 0 2 2 2 0 TPL-binding domain in jasmonate signalling Jas PF16135.5 ORF40969 - 8.6 6.6 8.8 2.7 8.2 1.3 2.3 2 0 0 2 2 2 0 TPL-binding domain in jasmonate signalling DUF930 PF06059.12 ORF40824 - 0.045 14.3 0.0 0.079 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF930) DUF2325 PF10087.9 ORF4042 - 0.083 13.0 0.0 15 5.8 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) TMEM187 PF15100.6 ORF36261 - 0.16 11.5 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 TMEM187 protein family QWRF PF04484.12 ORF35118 - 0.039 13.7 1.4 0.045 13.5 1.4 1.1 1 0 0 1 1 1 0 QWRF family Mod_r PF07200.13 ORF34764 - 0.012 15.7 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein IHO1 PF15771.5 ORF34346 - 0.22 10.2 1.9 0.26 10.0 1.9 1.1 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 TatD_DNase PF01026.21 ORF28239 - 7.1e-34 117.3 0.0 7.9e-34 117.2 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase DUF2085 PF09858.9 ORF26996 - 0.11 13.0 1.5 0.54 10.8 0.9 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2085) Keratin_matx PF04579.12 ORF26932 - 0.077 13.3 9.5 0.09 13.1 0.2 2.5 2 1 0 2 2 2 0 Keratin, high-sulphur matrix protein Sec62 PF03839.16 ORF26587 - 1.2 8.5 11.1 1.6 8.2 11.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 FapA PF03961.13 ORF26587 - 1.9 7.0 14.3 2.5 6.6 14.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A MAPEG PF01124.18 ORF25005 - 1.2e-18 67.3 0.2 1.5e-18 67.0 0.2 1.1 1 0 0 1 1 1 1 MAPEG family Pyrophosphatase PF00719.19 ORF22561 - 3.1e-56 189.6 0.0 3.5e-56 189.5 0.0 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase InPase PF18823.1 ORF22561 - 0.027 14.2 0.1 0.08 12.6 0.0 1.7 2 0 0 2 2 2 0 Inorganic Pyrophosphatase DUF1484 PF07363.11 ORF16671 - 0.042 14.8 0.5 0.042 14.8 0.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1484) TFIIS_M PF07500.14 ORF152685 - 7.6e-10 39.3 0.0 1.1e-09 38.7 0.0 1.3 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain GPR15L PF15854.5 ORF152033 - 1.7 9.0 16.0 0.27 11.5 0.7 2.8 3 1 0 3 3 3 0 G-protein coupled receptor ligand 15 2OG-FeII_Oxy_3 PF13640.6 ORF150981 - 2.6e-18 66.7 0.0 3.3e-18 66.4 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF150981 - 3.7e-09 37.1 0.0 5.1e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily RRM_1 PF00076.22 ORF150610 - 8.3e-10 38.4 0.1 1.4e-09 37.6 0.1 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF3192 PF11399.8 ORF150610 - 0.096 12.6 0.4 0.16 11.9 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3192) RL PF17797.1 ORF150610 - 0.12 12.4 0.0 0.31 11.0 0.0 1.8 1 0 0 1 1 1 0 RL domain IGFL PF14653.6 ORF149655 - 0.0099 15.8 6.7 0.0099 15.8 6.7 3.0 1 1 2 3 3 3 2 Insulin growth factor-like family DUF4253 PF14062.6 ORF148466 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) PLDc PF00614.22 ORF147554 - 2.9e-05 24.0 0.3 5.2e-05 23.2 0.3 1.4 1 0 0 1 1 1 1 Phospholipase D Active site motif PLDc_2 PF13091.6 ORF147554 - 0.0086 16.0 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 1 PLD-like domain DUF4253 PF14062.6 ORF146735 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) m_DGTX_Dc1a_b_c PF17491.2 ORF145405 - 0.046 14.4 0.2 0.099 13.3 0.2 1.5 1 0 0 1 1 1 0 Spider Toxins mu-diguetoxin-1 a, b and c WD-3 PF09765.9 ORF14344 - 0.11 11.8 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 WD-repeat region DUF4200 PF13863.6 ORF142816 - 2.2e-18 66.8 35.6 2.2e-18 66.8 35.6 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4200) DUF948 PF06103.11 ORF142816 - 0.044 14.0 4.0 0.39 11.0 4.0 2.2 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DNA_pack_N PF02500.15 ORF142816 - 0.076 12.8 6.8 0.02 14.7 3.0 1.7 1 1 1 2 2 2 0 Probable DNA packing protein, N-terminus DUF4407 PF14362.6 ORF142816 - 0.46 9.8 9.8 0.6 9.4 9.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GIDA_assoc PF13932.6 ORF142816 - 0.47 10.6 16.6 0.73 10.0 16.4 1.4 1 1 0 1 1 1 0 GidA associated domain OmpH PF03938.14 ORF142816 - 1 9.7 28.6 2.3 8.5 21.0 2.3 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) TAF8_C PF10406.9 ORF142816 - 1.2 9.8 6.4 4.9 7.8 1.2 2.7 2 0 0 2 2 2 0 Transcription factor TFIID complex subunit 8 C-term DUF1465 PF07323.12 ORF142816 - 1.9 8.3 11.6 0.18 11.7 5.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1465) Mit_KHE1 PF10173.9 ORF142816 - 4.8 7.2 12.6 10 6.1 12.6 1.7 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related KIF1B PF12423.8 ORF142816 - 5.4 7.5 9.7 3.6 8.1 0.6 2.9 3 0 0 3 3 3 0 Kinesin protein 1B DUF1977 PF09320.11 ORF142027 - 4.9e-15 55.7 5.8 4.9e-15 55.7 5.8 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF1977) Maf1 PF09174.10 ORF142027 - 0.0017 18.5 1.5 0.0024 18.1 1.5 1.3 1 1 0 1 1 1 1 Maf1 regulator AmpE PF17113.5 ORF14070 - 6e-106 354.0 4.7 6.6e-106 353.8 4.7 1.0 1 0 0 1 1 1 1 Regulatory signalling modulator protein AmpE MLTD_N PF06474.12 ORF14070 - 0.26 11.5 0.7 0.89 9.8 0.0 2.2 2 0 0 2 2 2 0 MltD lipid attachment motif PHD PF00628.29 ORF140590 - 0.00019 21.3 11.2 0.00043 20.1 11.2 1.6 1 0 0 1 1 1 1 PHD-finger LNP1 PF15419.6 ORF138982 - 0.016 15.4 3.4 0.77 10.0 0.0 2.1 2 0 0 2 2 2 0 Leukemia NUP98 fusion partner 1 EF-hand_7 PF13499.6 ORF137898 - 9.3e-07 29.2 5.7 1.8e-06 28.3 2.0 2.5 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF137898 - 1.4e-05 24.3 2.4 1.5e-05 24.2 0.4 2.2 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF137898 - 0.00016 21.3 1.3 0.0068 16.3 0.0 3.1 4 0 0 4 4 4 1 EF-hand domain EF-hand_8 PF13833.6 ORF137898 - 0.00028 20.7 1.9 0.00093 19.0 0.4 2.3 1 1 1 2 2 2 1 EF-hand domain pair ACBP PF00887.19 ORF137898 - 0.0029 17.8 0.1 0.0051 17.0 0.1 1.4 1 0 0 1 1 1 1 Acyl CoA binding protein SPARC_Ca_bdg PF10591.9 ORF137898 - 0.045 14.1 1.0 0.074 13.4 1.0 1.5 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region DUF4253 PF14062.6 ORF13476 - 0.083 13.1 0.0 0.28 11.4 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4253) DivIC PF04977.15 ORF133129 - 0.0017 18.1 3.6 0.059 13.1 1.0 2.6 2 0 0 2 2 2 1 Septum formation initiator CDC37_C PF08564.10 ORF133129 - 0.019 15.1 0.6 0.034 14.3 0.6 1.5 1 1 0 1 1 1 0 Cdc37 C terminal domain YtzH PF14165.6 ORF133129 - 0.035 14.5 2.2 0.1 13.0 0.1 2.1 1 1 1 2 2 2 0 YtzH-like protein Syntaxin-6_N PF09177.11 ORF133129 - 0.047 14.3 1.2 0.077 13.6 0.9 1.4 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF2663 PF10864.8 ORF133129 - 0.061 13.7 3.3 0.085 13.3 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2663) DUF2443 PF10398.9 ORF133129 - 0.08 13.0 2.0 0.19 11.8 0.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2443) Flagellin_N PF00669.20 ORF133129 - 0.086 12.9 0.2 0.13 12.4 0.2 1.2 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region SOGA PF11365.8 ORF133129 - 0.15 13.2 2.8 1.1 10.5 0.1 2.1 1 1 1 2 2 2 0 Protein SOGA YabA PF06156.13 ORF133129 - 0.96 10.1 5.8 1.3 9.7 3.3 2.0 1 1 1 2 2 2 0 Initiation control protein YabA LPD30 PF18850.1 ORF130953 - 0.1 12.4 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Large polyvalent protein associated domain 30 MSSP PF03940.13 ORF130107 - 8.1 6.1 22.0 2.7 7.6 5.6 3.3 3 0 0 3 3 3 0 Male specific sperm protein Nucleocapsid-N PF11030.8 ORF128567 - 1.5 8.8 7.2 2.8 7.9 6.9 1.6 1 1 1 2 2 2 0 Nucleocapsid protein N Penaeidin PF05927.11 ORF127890 - 0.066 14.0 0.0 0.15 12.8 0.0 1.6 1 0 0 1 1 1 0 Penaeidin Perm-CXXC PF15629.6 ORF125206 - 0.15 12.3 2.7 0.54 10.6 2.7 1.9 1 0 0 1 1 1 0 Permuted single zf-CXXC unit Peptidase_M23 PF01551.22 ORF124866 - 7.7e-10 38.9 0.1 1.7e-09 37.7 0.1 1.6 1 1 0 1 1 1 1 Peptidase family M23 Biotin_lipoyl PF00364.22 ORF124866 - 0.028 14.2 0.1 0.24 11.3 0.0 2.2 2 0 0 2 2 2 0 Biotin-requiring enzyme RnfC_N PF13375.6 ORF124866 - 0.14 12.1 0.2 0.41 10.6 0.1 1.9 1 1 1 2 2 2 0 RnfC Barrel sandwich hybrid domain GPR15L PF15854.5 ORF123815 - 1.7 9.0 16.0 0.27 11.5 0.7 2.8 3 1 0 3 3 3 0 G-protein coupled receptor ligand 15 BBS2_N PF14781.6 ORF123358 - 0.11 12.4 0.0 6 6.8 0.0 2.1 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 2, N-terminal Ribosomal_L5_C PF00673.21 ORF120629 - 2e-20 72.8 0.0 3.8e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF120629 - 1.7e-15 57.1 0.1 2.6e-15 56.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L5 DUF1293 PF06950.11 ORF120629 - 0.094 12.8 0.1 0.81 9.8 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1293) OprD PF03573.13 ORF120629 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 outer membrane porin, OprD family Flavodoxin_2 PF02525.17 ORF119685 - 4.1e-41 140.9 0.0 5e-41 140.6 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 ORF119685 - 1.5e-07 31.3 0.0 2.2e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 NADPH-dependent FMN reductase EMC3_TMCO1 PF01956.16 ORF117431 - 7.7 6.2 6.9 11 5.7 6.9 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like RINGv PF12906.7 ORF116991 - 4.2e-14 52.4 12.2 6.2e-14 51.9 12.2 1.3 1 0 0 1 1 1 1 RING-variant domain zf-RING_2 PF13639.6 ORF116991 - 0.15 12.4 11.5 0.31 11.4 11.6 1.5 1 1 0 1 1 1 0 Ring finger domain MAPEG PF01124.18 ORF116152 - 1.2e-18 67.3 0.2 1.5e-18 67.0 0.2 1.1 1 0 0 1 1 1 1 MAPEG family Totivirus_coat PF05518.11 ORF114143 - 0.31 9.1 2.8 0.35 8.9 2.8 1.1 1 0 0 1 1 1 0 Totivirus coat protein Ribosomal_L5_C PF00673.21 ORF114062 - 2e-20 72.8 0.0 3.8e-20 71.9 0.0 1.5 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF114062 - 1.6e-15 57.2 0.1 2.6e-15 56.5 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 DUF1293 PF06950.11 ORF114062 - 0.093 12.9 0.1 0.82 9.8 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1293) OprD PF03573.13 ORF114062 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 outer membrane porin, OprD family m_DGTX_Dc1a_b_c PF17491.2 ORF113774 - 0.046 14.4 0.2 0.099 13.3 0.2 1.5 1 0 0 1 1 1 0 Spider Toxins mu-diguetoxin-1 a, b and c DUF2085 PF09858.9 ORF112778 - 0.11 13.0 1.5 0.54 10.8 0.9 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2085) UPAR_LY6 PF00021.21 ORF110071 - 0.032 14.9 0.8 0.032 14.9 0.8 2.0 2 1 0 2 2 2 0 u-PAR/Ly-6 domain Methyltransf_32 PF13679.6 ORF10998 - 0.032 14.2 1.3 0.044 13.8 1.3 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ank_2 PF12796.7 ORF109167 - 5.8e-30 103.7 0.0 2.9e-13 50.2 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF109167 - 1.5e-22 79.0 0.4 9.8e-05 22.6 0.0 5.1 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF109167 - 7.3e-18 64.4 2.0 1.1e-07 31.9 0.0 4.2 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF109167 - 2.8e-15 56.4 0.1 1.6e-05 25.3 0.0 4.1 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF109167 - 6e-12 44.6 0.2 0.22 12.2 0.0 5.3 5 0 0 5 5 5 4 Ankyrin repeat PDEase_I PF00233.19 ORF108647 - 2.2e-45 155.2 6.2 2.9e-45 154.9 6.2 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase DUF2852 PF11014.8 ORF108647 - 0.039 14.1 0.0 0.06 13.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) Chalcone PF02431.15 ORF108647 - 0.13 11.6 0.1 0.16 11.3 0.1 1.2 1 0 0 1 1 1 0 Chalcone-flavanone isomerase Ribosomal_S7 PF00177.21 ORF108313 - 1.4e-37 128.7 0.8 1.6e-37 128.4 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ribosomal_L6e PF01159.19 ORF108313 - 0.04 14.5 0.1 0.062 13.8 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L6e YdjO PF14169.6 ORF107317 - 0.047 13.4 0.9 10 6.0 0.0 2.3 2 0 0 2 2 2 0 Cold-inducible protein YdjO Ras PF00071.22 ORF101048 - 2.4e-41 141.1 0.6 2.8e-41 140.8 0.6 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF101048 - 2.8e-24 85.6 0.1 4.3e-24 85.0 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF101048 - 2.9e-11 43.1 0.1 3.4e-11 42.9 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF101048 - 4e-05 23.1 0.3 5.4e-05 22.7 0.3 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF101048 - 0.00058 19.4 0.0 0.0008 19.0 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF101048 - 0.0035 17.4 0.0 0.0064 16.6 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF101048 - 0.011 15.7 0.2 0.17 11.8 0.0 2.2 1 1 0 2 2 2 0 RsgA GTPase MMR_HSR1_Xtn PF16897.5 ORF101048 - 0.046 13.7 0.1 0.082 12.9 0.1 1.5 1 1 0 1 1 1 0 C-terminal region of MMR_HSR1 domain YwhD PF08741.10 ORF101048 - 0.062 13.0 0.1 0.085 12.5 0.1 1.2 1 0 0 1 1 1 0 YwhD family PDR_CDR PF06422.12 NODE_39846_length_523_cov_3.319672_g32415_i0forward_frame_1 - 0.12 12.3 0.1 0.26 11.2 0.1 1.5 1 0 0 1 1 1 0 CDR ABC transporter Geminin PF07412.12 NODE_39839_length_523_cov_20.469262_g32408_i0reverse_frame_1 - 0.014 15.2 0.5 0.014 15.2 0.5 2.0 2 0 0 2 2 2 0 Geminin GUCT PF08152.12 NODE_39836_length_523_cov_69.965164_g32405_i0forward_frame_1 - 0.0019 18.4 0.0 0.0026 18.0 0.0 1.2 1 0 0 1 1 1 1 GUCT (NUC152) domain DbpA PF03880.15 NODE_39836_length_523_cov_69.965164_g32405_i0forward_frame_1 - 0.073 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 DbpA RNA binding domain DUF802 PF05650.11 NODE_39828_length_523_cov_90.295082_g32397_i0forward_frame_1 - 6.2 7.4 8.4 8.5 6.9 0.4 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF802) Chon_Sulph_att PF06566.11 NODE_39808_length_523_cov_221.284836_g32379_i0forward_frame_1 - 0.11 12.4 0.5 0.14 12.0 0.5 1.2 1 0 0 1 1 1 0 Chondroitin sulphate attachment domain Filament_head PF04732.14 NODE_39808_length_523_cov_221.284836_g32379_i0forward_frame_1 - 0.63 10.9 12.6 9.9 7.1 0.0 2.3 2 0 0 2 2 2 0 Intermediate filament head (DNA binding) region PsbK PF02533.15 NODE_39799_length_523_cov_446.122951_g32370_i0forward_frame_1 - 3.1e-20 72.0 6.4 7.7e-20 70.8 6.4 1.6 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component Trp_oprn_chp PF09534.10 NODE_39799_length_523_cov_446.122951_g32370_i0forward_frame_1 - 0.015 15.1 1.0 0.02 14.7 1.0 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) RskA PF10099.9 NODE_39799_length_523_cov_446.122951_g32370_i0forward_frame_1 - 0.38 11.0 4.1 0.5 10.6 4.1 1.2 1 0 0 1 1 1 0 Anti-sigma-K factor rskA MFS_1 PF07690.16 NODE_39790_length_524_cov_2.386503_g32362_i0reverse_frame_1 - 3.6e-09 36.0 19.0 3.6e-09 36.0 19.0 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily CPP1-like PF11833.8 NODE_39790_length_524_cov_2.386503_g32362_i0reverse_frame_1 - 0.87 9.2 3.4 0.74 9.4 2.5 1.4 1 1 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Phage_holin_5_2 PF16079.5 NODE_39790_length_524_cov_2.386503_g32362_i0forward_frame_1 - 0.11 12.8 1.1 0.54 10.6 0.2 2.2 2 0 0 2 2 2 0 Phage holin family Hol44, in holin superfamily V HTH_6 PF01418.17 NODE_39788_length_524_cov_2.578732_g32360_i0reverse_frame_1 - 6.3e-06 26.1 0.0 1.5e-05 24.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family DUF5359 PF17313.2 NODE_39788_length_524_cov_2.578732_g32360_i0reverse_frame_1 - 0.15 12.1 0.3 0.38 10.8 0.3 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5359) ABC2_membrane PF01061.24 NODE_39787_length_524_cov_2.584867_g32359_i0forward_frame_1 - 1.9e-30 105.9 21.8 2.1e-30 105.7 21.8 1.0 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 NODE_39787_length_524_cov_2.584867_g32359_i0forward_frame_1 - 0.02 14.0 26.8 0.015 14.4 22.0 2.0 1 1 1 2 2 2 0 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 NODE_39787_length_524_cov_2.584867_g32359_i0forward_frame_1 - 0.64 9.2 14.7 1.1 8.4 14.7 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF5411 PF17424.2 NODE_39783_length_524_cov_2.850716_g32355_i0reverse_frame_1 - 0.062 13.3 0.7 0.65 10.0 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5411) TRAP_beta PF05753.14 NODE_39783_length_524_cov_2.850716_g32355_i0reverse_frame_1 - 0.096 12.1 0.1 1.6 8.1 0.0 2.1 2 0 0 2 2 2 0 Translocon-associated protein beta (TRAPB) Wzy_C PF04932.15 NODE_39765_length_524_cov_86.153374_g29217_i1reverse_frame_1 - 0.58 9.8 4.6 0.88 9.2 4.6 1.3 1 0 0 1 1 1 0 O-Antigen ligase AveC_like PF17198.4 NODE_39765_length_524_cov_86.153374_g29217_i1reverse_frame_1 - 5.1 6.5 9.9 2.2 7.7 4.2 2.4 2 1 1 3 3 3 0 Spirocyclase AveC-like Herpes_capsid PF06112.11 NODE_39760_length_524_cov_90.202454_g32333_i0reverse_frame_1 - 1.4 9.0 6.0 2.2 8.3 6.0 1.4 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein TauD PF02668.16 NODE_39760_length_524_cov_90.202454_g32333_i0forward_frame_1 - 1.6e-17 64.2 0.2 1.9e-17 63.9 0.2 1.1 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family 2OG-Fe_Oxy_2 PF10014.9 NODE_39760_length_524_cov_90.202454_g32333_i0forward_frame_1 - 0.12 12.1 0.0 0.17 11.7 0.0 1.3 1 1 0 1 1 1 0 2OG-Fe dioxygenase KI67R PF08065.12 NODE_39758_length_524_cov_97.944785_g32331_i0reverse_frame_1 - 0.069 13.7 0.3 0.069 13.7 0.3 2.0 1 1 1 2 2 2 0 KI67R (NUC007) repeat PPP1R35_C PF15503.6 NODE_39746_length_524_cov_148.914110_g32319_i0reverse_frame_1 - 0.14 12.0 0.2 0.23 11.2 0.2 1.3 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 35 C-terminus Mntp PF02659.15 NODE_39721_length_525_cov_3.332653_g32298_i0reverse_frame_1 - 0.0037 17.0 1.8 0.0061 16.3 1.8 1.5 1 0 0 1 1 1 1 Putative manganese efflux pump Fig1 PF12351.8 NODE_39721_length_525_cov_3.332653_g32298_i0reverse_frame_1 - 0.01 15.8 4.6 0.016 15.2 4.4 1.6 1 1 0 1 1 1 1 Ca2+ regulator and membrane fusion protein Fig1 E_raikovi_mat PF06360.11 NODE_39707_length_525_cov_92.322449_g32284_i0forward_frame_1 - 0.022 15.2 4.3 0.25 11.8 1.5 2.7 2 0 0 2 2 2 0 Euplotes raikovi mating pheromone GP88 PF17338.2 NODE_39701_length_525_cov_141.210204_g32278_i0reverse_frame_1 - 0.12 11.8 0.9 0.17 11.3 0.9 1.2 1 0 0 1 1 1 0 Gene product 88 MU2_FHA PF18221.1 NODE_39681_length_526_cov_2.150713_g32261_i0forward_frame_3 - 0.026 14.6 0.0 0.052 13.6 0.0 1.5 2 0 0 2 2 2 0 Mutator 2 Fork head associated domain NUDIX PF00293.28 NODE_39681_length_526_cov_2.150713_g32261_i0forward_frame_2 - 0.062 13.4 0.0 0.091 12.8 0.0 1.3 1 0 0 1 1 1 0 NUDIX domain TonB_C PF03544.14 NODE_39680_length_526_cov_2.158859_g32260_i0forward_frame_3 - 1.9e-19 69.9 0.1 2.8e-19 69.3 0.1 1.2 1 0 0 1 1 1 1 Gram-negative bacterial TonB protein C-terminal TonB_N PF16031.5 NODE_39680_length_526_cov_2.158859_g32260_i0forward_frame_3 - 0.0027 18.2 4.7 0.0045 17.5 4.7 1.4 1 0 0 1 1 1 1 TonB polyproline region TonB_2 PF13103.6 NODE_39680_length_526_cov_2.158859_g32260_i0forward_frame_3 - 0.083 13.1 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 TonB C terminal ADK_lid PF05191.14 NODE_39674_length_526_cov_46.199593_g32254_i0reverse_frame_3 - 0.15 12.1 0.3 0.15 12.1 0.3 2.1 3 0 0 3 3 3 0 Adenylate kinase, active site lid Sigma70_r4 PF04545.16 NODE_39670_length_526_cov_68.046843_g32250_i0reverse_frame_3 - 1.4e-18 66.1 0.4 2.3e-18 65.4 0.4 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_25 PF13413.6 NODE_39670_length_526_cov_68.046843_g32250_i0reverse_frame_3 - 0.08 12.8 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain IL6 PF00489.17 NODE_39663_length_526_cov_106.026477_g32243_i0reverse_frame_2 - 0.00014 21.5 0.9 0.0003 20.4 0.9 1.5 1 0 0 1 1 1 1 Interleukin-6/G-CSF/MGF family eRF1_3 PF03465.15 NODE_39663_length_526_cov_106.026477_g32243_i0reverse_frame_2 - 0.088 13.3 0.4 0.13 12.7 0.4 1.2 1 0 0 1 1 1 0 eRF1 domain 3 DUF1759 PF03564.15 NODE_39663_length_526_cov_106.026477_g32243_i0reverse_frame_2 - 0.17 11.8 3.7 0.1 12.5 1.7 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) DUF1461 PF07314.11 NODE_39654_length_526_cov_143.441955_g32235_i0reverse_frame_2 - 0.34 10.8 4.9 0.83 9.5 4.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1461) Hormone_4 PF00220.17 NODE_39653_length_526_cov_144.254582_g32234_i0reverse_frame_2 - 8.6 6.6 26.0 70 3.8 0.1 6.7 7 0 0 7 7 7 0 Neurohypophysial hormones, N-terminal Domain DUF2977 PF11192.8 NODE_39653_length_526_cov_144.254582_g32234_i0forward_frame_2 - 0.85 9.8 11.3 2.1e+02 2.1 0.1 5.9 5 2 2 7 7 7 0 Protein of unknown function (DUF2977) RNA_polI_A34 PF08208.11 NODE_39651_length_526_cov_163.804481_g32232_i0reverse_frame_3 - 0.092 12.8 32.9 0.032 14.3 23.6 2.1 2 0 0 2 2 2 0 DNA-directed RNA polymerase I subunit RPA34.5 SAPS PF04499.15 NODE_39651_length_526_cov_163.804481_g32232_i0reverse_frame_3 - 0.92 8.2 10.3 1.1 8.0 10.3 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Presenilin PF01080.17 NODE_39651_length_526_cov_163.804481_g32232_i0reverse_frame_3 - 1.1 7.9 7.3 1.3 7.7 7.3 1.1 1 0 0 1 1 1 0 Presenilin Wzy_C PF04932.15 NODE_39651_length_526_cov_163.804481_g32232_i0forward_frame_3 - 7.9 6.1 10.1 0.78 9.4 3.5 2.0 2 0 0 2 2 2 0 O-Antigen ligase DUF884 PF05959.11 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_3 - 0.0093 15.6 0.1 9.5 5.8 0.0 3.5 1 1 3 4 4 4 2 Nucleopolyhedrovirus protein of unknown function (DUF884) DUF1231 PF06802.11 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_3 - 0.062 12.4 0.4 17 4.4 0.0 3.4 1 1 3 4 4 4 0 Protein of unknown function (DUF1231) HD_5 PF13487.6 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_3 - 0.95 9.8 7.4 88 3.5 0.0 4.6 4 1 0 4 4 4 0 HD domain Sulfotransfer_1 PF00685.27 NODE_39648_length_526_cov_174.867617_g32230_i0reverse_frame_2 - 0.0044 16.6 0.0 6.2 6.2 0.0 3.2 2 1 0 2 2 2 2 Sulfotransferase domain PknG_rubred PF16919.5 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_3 - 0.038 14.2 0.0 41 4.3 0.0 3.3 4 0 0 4 4 4 0 Protein kinase G rubredoxin domain IncFII_repA PF02387.15 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_3 - 0.047 12.9 10.1 11 5.2 0.1 4.6 4 1 0 5 5 5 0 IncFII RepA protein family Pam17 PF08566.10 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_3 - 0.42 10.5 9.6 0.33 10.8 2.1 2.6 1 1 2 3 3 3 0 Mitochondrial import protein Pam17 HCV_NS5a_1a PF08300.13 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_3 - 0.51 10.5 3.8 3 8.0 0.1 3.0 1 1 3 4 4 4 0 Hepatitis C virus non-structural 5a zinc finger domain RCC1_2 PF13540.6 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 1.3e-42 142.7 29.5 6.8e-12 44.9 1.2 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 1.7e-14 54.2 35.9 0.15 12.7 0.1 8.1 6 2 2 8 8 8 8 Regulator of chromosome condensation (RCC1) repeat DUF5125 PF17163.4 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.0013 18.9 0.1 0.47 10.6 0.0 3.2 1 1 3 4 4 4 1 Domain of unknown function (DUF5125) FAF PF11250.8 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.041 14.1 0.0 66 3.9 0.0 3.6 4 0 0 4 4 4 0 Fantastic Four meristem regulator TBP PF00352.21 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.043 13.8 0.0 19 5.3 0.0 3.5 2 1 2 4 4 4 0 Transcription factor TFIID (or TATA-binding protein, TBP) PLDc PF00614.22 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.046 13.9 0.0 3.2 8.1 0.0 3.1 3 0 0 3 3 3 0 Phospholipase D Active site motif UL73_N PF12522.8 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.22 11.3 10.8 17 5.2 0.1 4.1 4 0 0 4 4 4 0 Cytomegalovirus glycoprotein N terminal Kelch_4 PF13418.6 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.31 11.1 6.8 63 3.7 0.1 4.1 4 0 0 4 4 4 0 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 0.89 9.6 4.1 52 4.0 0.1 3.7 4 0 0 4 4 4 0 Kelch motif DUF1451 PF07295.11 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 2.4 8.2 3.9 11 6.0 0.1 2.7 3 0 0 3 3 3 0 Zinc-ribbon containing domain NPP1 PF05630.11 NODE_39648_length_526_cov_174.867617_g32230_i0forward_frame_2 - 4 7.5 8.2 60 3.7 0.1 3.7 1 1 1 3 3 3 0 Necrosis inducing protein (NPP1) p31comet PF06581.12 NODE_39644_length_526_cov_229.004073_g32226_i0forward_frame_2 - 0.048 12.8 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks139.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks139.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks139.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks139.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CorA PF01544.18 ORF25053 - 5.1e-24 85.1 0.0 3.9e-21 75.6 0.0 2.1 2 0 0 2 2 2 2 CorA-like Mg2+ transporter protein Transglut_core PF01841.19 ORF135482 - 2.4e-13 50.5 0.3 9.4e-13 48.6 0.3 2.0 1 0 0 1 1 1 1 Transglutaminase-like superfamily F5_F8_type_C PF00754.25 ORF135482 - 1.4e-12 47.8 0.0 3.3e-12 46.6 0.0 1.6 1 0 0 1 1 1 1 F5/8 type C domain Rad4 PF03835.15 ORF135482 - 7.4e-10 38.7 0.2 1.5e-09 37.7 0.2 1.4 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain PAW PF04721.17 ORF135482 - 0.0014 18.4 0.1 0.0022 17.8 0.1 1.3 1 0 0 1 1 1 1 PNGase C-terminal domain, mannose-binding module PAW Zn_Tnp_IS1595 PF12760.7 ORF135482 - 0.62 10.1 5.1 3.7 7.6 4.5 2.5 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Methyltransf_23 PF13489.6 ORF122281 - 1.6e-05 24.8 0.0 2.7e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF122281 - 0.0002 22.0 0.0 0.00037 21.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF122281 - 0.025 15.2 0.0 0.052 14.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 ORF122281 - 0.029 13.9 0.0 0.048 13.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF122281 - 0.047 13.7 0.0 0.079 12.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 ORF122281 - 0.089 12.2 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) SAM_MT PF04445.13 ORF122281 - 0.11 11.9 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase Methyltransf_31 PF13847.6 ORF122281 - 0.16 11.7 0.1 0.3 10.9 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 ORF122281 - 0.17 11.3 0.0 0.27 10.6 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB XylR_N PF06505.11 ORF120666 - 0.12 12.1 0.0 0.31 10.8 0.0 1.6 1 0 0 1 1 1 0 Activator of aromatic catabolism Tnp_zf-ribbon_2 PF13842.6 ORF119455 - 0.47 11.3 3.4 0.79 10.6 1.1 2.3 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon MA3 PF02847.17 ORF119455 - 10 6.2 12.4 0.21 11.6 0.9 3.7 4 1 0 4 4 4 0 MA3 domain FYVE PF01363.21 ORF61040 - 1.9e-06 27.9 8.1 4.4e-06 26.7 8.1 1.6 1 0 0 1 1 1 1 FYVE zinc finger FH2 PF02181.23 ORF61040 - 0.0016 17.7 0.1 0.0027 16.9 0.1 1.3 1 0 0 1 1 1 1 Formin Homology 2 Domain FYVE PF01363.21 ORF45407 - 1.9e-06 27.9 8.1 4.4e-06 26.7 8.1 1.6 1 0 0 1 1 1 1 FYVE zinc finger FH2 PF02181.23 ORF45407 - 0.0016 17.7 0.1 0.0027 16.9 0.1 1.3 1 0 0 1 1 1 1 Formin Homology 2 Domain DUF4381 PF14316.6 ORF3844 - 0.011 16.0 0.3 0.028 14.7 0.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) XPG_I PF00867.18 ORF34006 - 4.9e-14 52.5 0.2 1.5e-13 50.9 0.2 1.9 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 ORF34006 - 2.8e-09 37.4 0.0 6.7e-09 36.1 0.0 1.7 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I_2 PF12813.7 ORF34006 - 0.034 13.6 0.1 0.075 12.5 0.1 1.5 1 0 0 1 1 1 0 XPG domain containing TDRP PF15683.5 ORF34006 - 0.53 10.2 9.0 0.056 13.4 3.7 2.0 2 0 0 2 2 2 0 Testis development-related protein Kinesin PF00225.23 ORF15314 - 9.5e-100 333.8 0.1 1.4e-99 333.2 0.1 1.3 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF15314 - 1.9e-23 83.1 0.0 6.7e-23 81.3 0.0 2.0 1 0 0 1 1 1 1 Microtubule binding AAA_30 PF13604.6 ORF15314 - 0.07 12.8 0.0 0.65 9.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain betaPIX_CC PF16523.5 ORF15314 - 1.4 8.8 7.5 6.3 6.7 0.3 2.9 3 0 0 3 3 3 0 betaPIX coiled coil ZapB PF06005.12 ORF15314 - 2.1 8.9 19.9 0.96 9.9 0.8 3.9 3 0 0 3 3 3 0 Cell division protein ZapB TMF_TATA_bd PF12325.8 ORF15314 - 8.1 6.7 16.7 1.7 8.9 2.0 3.5 2 1 0 3 3 3 0 TATA element modulatory factor 1 TATA binding DivIC PF04977.15 ORF15314 - 8.7 6.2 13.1 0.54 10.1 0.4 3.5 3 0 0 3 3 3 0 Septum formation initiator Pyr_redox_3 PF13738.6 ORF148311 - 3.8e-06 26.4 0.0 6.7e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 ORF148311 - 0.00042 18.9 0.0 0.024 13.1 0.0 2.2 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 ORF148311 - 0.0012 19.0 0.0 0.0052 17.0 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 ORF148311 - 0.0099 15.1 0.0 0.023 13.9 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF148311 - 0.014 14.6 0.0 0.034 13.4 0.0 1.6 1 1 0 1 1 1 0 Thi4 family SpoIIP PF07454.11 ORF145369 - 0.023 14.2 0.2 0.023 14.2 0.2 2.3 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) APG6_N PF17675.1 ORF145369 - 0.023 15.2 4.0 0.023 15.2 4.0 2.2 3 0 0 3 3 3 0 Apg6 coiled-coil region Hormone_1 PF00103.20 ORF145369 - 0.18 11.5 2.1 0.38 10.5 2.1 1.5 1 0 0 1 1 1 0 Somatotropin hormone family BPL_N PF09825.9 ORF145369 - 0.19 10.8 1.2 0.34 9.9 1.2 1.4 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF3535 PF12054.8 ORF145369 - 0.32 10.2 3.0 0.65 9.2 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3535) DUF1664 PF07889.12 ORF145369 - 1.5 8.9 5.3 1.2 9.2 2.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF4381 PF14316.6 ORF125309 - 0.011 16.0 0.3 0.028 14.7 0.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Ammonium_transp PF00909.21 ORF92538 - 6.8e-110 367.5 29.5 8.6e-110 367.2 29.5 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF3138 PF11336.8 ORF92538 - 0.032 12.8 3.3 0.054 12.1 3.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Vir_act_alpha_C PF10400.9 ORF92538 - 0.07 13.8 0.1 0.12 13.1 0.1 1.3 1 0 0 1 1 1 0 Virulence activator alpha C-term Trp_oprn_chp PF09534.10 ORF92538 - 0.25 11.1 6.7 0.31 10.8 2.0 3.1 3 0 0 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) NIF PF03031.18 ORF90914 - 2.3e-41 141.1 1.9 7e-41 139.6 1.9 1.9 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF2192 PF09958.9 ORF90914 - 0.41 10.1 4.8 6.7 6.2 0.2 2.6 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2192) PARP PF00644.20 ORF6009 - 1.5e-13 50.8 0.1 2.7e-13 50.0 0.1 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain ARTD15_N PF18084.1 ORF6009 - 9e-05 22.6 0.0 0.0012 19.0 0.0 2.3 1 1 0 1 1 1 1 ARTD15 N-terminal domain PTS_2-RNA PF01885.16 ORF6009 - 0.16 12.0 0.0 0.36 10.9 0.0 1.5 1 1 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family MTHFR PF02219.17 ORF55676 - 1.4e-111 372.5 0.1 2.3e-111 371.7 0.1 1.3 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase DUF1987 PF09345.10 ORF55676 - 0.0039 16.8 0.9 0.0086 15.7 0.5 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1987) RHS PF03527.14 ORF45549 - 1.8e-14 53.2 0.4 6.2e-14 51.5 0.4 2.1 1 0 0 1 1 1 1 RHS protein RHS_repeat PF05593.14 ORF45549 - 4.4e-11 43.1 34.4 1e-07 32.3 5.5 7.5 8 2 1 9 9 9 2 RHS Repeat OCRE PF17780.1 ORF45549 - 2.3 8.3 11.8 0.13 12.3 2.7 3.3 2 1 0 2 2 2 0 OCRE domain EF-hand_8 PF13833.6 ORF33772 - 0.00038 20.3 0.0 0.0013 18.5 0.0 2.0 1 0 0 1 1 1 1 EF-hand domain pair CCB2_CCB4 PF11152.8 ORF33772 - 0.062 12.6 0.1 0.22 10.8 0.0 1.9 2 0 0 2 2 2 0 Cofactor assembly of complex C subunit B, CCB2/CCB4 EF-hand_6 PF13405.6 ORF33772 - 0.11 12.4 0.0 2.1 8.5 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain ZZ PF00569.17 ORF151463 - 8.2e-09 35.1 9.3 2e-08 33.9 9.3 1.6 1 0 0 1 1 1 1 Zinc finger, ZZ type PB1 PF00564.24 ORF151463 - 5.1e-07 29.5 3.6 6.4e-07 29.2 0.1 2.8 4 0 0 4 4 4 1 PB1 domain N_BRCA1_IG PF16158.5 ORF151463 - 1.2e-05 25.9 0.0 3.2e-05 24.6 0.0 1.7 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene DUF2309 PF10070.9 ORF151463 - 0.1 10.9 0.0 0.18 10.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2309) EFG_IV PF03764.18 ORF145574 - 2.1e-28 98.5 0.0 1.1e-27 96.2 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF145574 - 6.4e-20 71.0 0.0 2.5e-19 69.1 0.0 2.0 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF145574 - 2.1e-14 53.3 0.0 8.1e-14 51.5 0.0 2.0 1 1 1 2 2 2 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF145574 - 3.7e-14 52.9 0.1 9.7e-14 51.5 0.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 ORF145574 - 0.055 13.3 0.0 0.1 12.4 0.0 1.4 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain Ion_trans PF00520.31 ORF125068 - 9.2e-09 34.9 11.7 9.2e-09 34.9 11.7 2.6 2 0 0 2 2 2 1 Ion transport protein ACOX PF01756.19 ORF122166 - 1.2e-09 38.0 0.3 2.9e-09 36.8 0.3 1.6 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_ox_N PF14749.6 ORF122166 - 0.0088 16.6 0.1 0.022 15.3 0.1 1.7 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Neil1-DNA_bind PF09292.10 ORF122166 - 0.28 11.2 0.6 0.89 9.6 0.6 1.9 1 0 0 1 1 1 0 Endonuclease VIII-like 1, DNA bind DUF5522 PF17653.1 ORF116616 - 1.3 9.0 13.4 0.15 12.0 5.3 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5522) ABC_tran PF00005.27 ORF112817 - 1.6e-28 99.9 0.1 2.7e-28 99.2 0.1 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF112817 - 9.8e-11 41.8 20.9 1.5e-10 41.2 20.9 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF112817 - 9.9e-06 25.1 4.1 0.00044 19.7 4.1 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain NTPase_1 PF03266.15 ORF112817 - 0.0042 17.0 1.1 0.014 15.4 0.1 2.2 2 0 0 2 2 2 1 NTPase MMR_HSR1 PF01926.23 ORF112817 - 0.0056 16.7 1.0 0.023 14.8 0.1 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA PF00004.29 ORF112817 - 0.01 16.3 1.1 2 8.8 0.0 2.4 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 ORF112817 - 0.012 16.1 0.4 0.028 14.9 0.4 1.5 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 ORF112817 - 0.026 14.6 0.6 9 6.4 0.3 2.8 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DDRGK PF09756.9 ORF112817 - 0.044 13.4 0.4 0.098 12.2 0.4 1.6 1 0 0 1 1 1 0 DDRGK domain DUF87 PF01935.17 ORF112817 - 0.048 13.7 0.0 0.12 12.4 0.0 1.7 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_21 PF13304.6 ORF112817 - 0.063 13.1 0.1 15 5.3 0.0 2.3 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 ORF112817 - 0.13 12.8 0.0 0.4 11.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 ORF112817 - 0.15 11.8 0.0 0.36 10.6 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain Chordopox_G3 PF06129.12 ORF112817 - 4.3 8.1 9.6 2 9.2 0.1 3.7 4 0 0 4 4 4 0 Chordopoxvirus G3 protein UPF0061 PF02696.14 ORF88825 - 1e-120 403.7 0.1 2.1e-120 402.7 0.1 1.4 1 1 0 1 1 1 1 Uncharacterized ACR, YdiU/UPF0061 family tRNA-synt_1c_C PF03950.18 ORF88825 - 0.11 12.4 0.5 0.22 11.4 0.5 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), anti-codon binding domain WD40 PF00400.32 ORF70917 - 7.4e-43 143.7 26.7 7.2e-08 33.0 1.0 7.3 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF70917 - 3.2e-15 56.2 5.1 2.6e-05 24.4 0.1 6.5 1 1 6 7 7 7 5 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF70917 - 5.3e-06 26.4 0.6 0.0018 18.2 0.1 3.4 1 1 3 4 4 4 1 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 ORF70917 - 5e-05 22.8 4.8 0.039 13.3 4.7 2.9 1 1 1 2 2 2 2 WD40-like domain PALB2_WD40 PF16756.5 ORF70917 - 0.00012 21.2 2.8 0.0092 14.9 0.1 3.1 2 1 1 3 3 3 1 Partner and localizer of BRCA2 WD40 domain Ge1_WD40 PF16529.5 ORF70917 - 0.00032 19.8 3.2 0.19 10.6 0.0 3.3 2 2 1 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Nucleoporin_N PF08801.11 ORF70917 - 0.0012 17.6 1.5 2.4 6.8 0.1 3.3 1 1 1 3 3 3 2 Nup133 N terminal like Nup160 PF11715.8 ORF70917 - 0.061 12.0 6.8 1.5 7.3 0.5 4.0 2 2 2 4 4 4 0 Nucleoporin Nup120/160 PXT1 PF15214.6 ORF70917 - 0.083 13.3 0.0 0.25 11.7 0.0 1.7 1 0 0 1 1 1 0 Peroxisomal testis-specific protein 1 Fib_alpha PF08702.10 ORF70917 - 2.8 8.1 16.1 0.47 10.6 10.8 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family WD40 PF00400.32 ORF60160 - 7.4e-43 143.7 26.7 7.2e-08 33.0 1.0 7.3 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF60160 - 3.2e-15 56.2 5.1 2.6e-05 24.4 0.1 6.5 1 1 6 7 7 7 5 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF60160 - 5.3e-06 26.4 0.6 0.0018 18.2 0.1 3.4 1 1 3 4 4 4 1 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 ORF60160 - 5e-05 22.8 4.8 0.039 13.3 4.7 2.9 1 1 1 2 2 2 2 WD40-like domain PALB2_WD40 PF16756.5 ORF60160 - 0.00012 21.2 2.8 0.0092 14.9 0.1 3.1 2 1 1 3 3 3 1 Partner and localizer of BRCA2 WD40 domain Ge1_WD40 PF16529.5 ORF60160 - 0.00032 19.8 3.2 0.19 10.6 0.0 3.3 2 2 1 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Nucleoporin_N PF08801.11 ORF60160 - 0.0012 17.6 1.5 2.4 6.8 0.1 3.3 1 1 1 3 3 3 2 Nup133 N terminal like Nup160 PF11715.8 ORF60160 - 0.061 12.0 6.8 1.5 7.3 0.5 4.0 2 2 2 4 4 4 0 Nucleoporin Nup120/160 PXT1 PF15214.6 ORF60160 - 0.083 13.3 0.0 0.25 11.7 0.0 1.7 1 0 0 1 1 1 0 Peroxisomal testis-specific protein 1 Fib_alpha PF08702.10 ORF60160 - 2.8 8.1 16.1 0.47 10.6 10.8 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family tRNA-synt_1 PF00133.22 ORF54540 - 4.9e-78 262.9 0.1 7.3e-78 262.3 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF54540 - 2.2e-34 118.6 1.2 4.9e-34 117.5 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA Val_tRNA-synt_C PF10458.9 ORF54540 - 1.5e-09 38.0 9.5 3e-09 37.0 7.4 2.5 2 0 0 2 2 2 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1g PF09334.11 ORF54540 - 3.8e-07 29.2 0.8 0.0036 16.1 0.0 2.5 1 1 1 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF54540 - 0.022 14.1 0.0 0.051 12.9 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain LRS4 PF10422.9 ORF54540 - 0.031 13.9 1.4 0.049 13.2 1.4 1.3 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 HTH_WhiA PF02650.14 ORF54540 - 0.45 10.9 2.3 1.8 8.9 1.2 2.3 2 0 0 2 2 2 0 WhiA C-terminal HTH domain DUF16 PF01519.16 ORF54540 - 0.51 10.9 3.2 0.81 10.2 1.8 2.0 2 0 0 2 2 2 0 Protein of unknown function DUF16 UQ_con PF00179.26 ORF32686 - 9e-06 25.4 0.0 2e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme ImpE PF07024.13 ORF32686 - 0.081 13.0 0.0 0.96 9.5 0.0 2.2 2 0 0 2 2 2 0 ImpE protein PhoLip_ATPase_C PF16212.5 ORF138358 - 1.2e-45 156.3 29.6 1.5e-45 155.9 29.6 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Cation_ATPase PF13246.6 ORF138358 - 1.4e-13 50.7 0.2 5.5e-12 45.6 0.0 2.3 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 ORF138358 - 9.1e-13 49.0 0.0 1e-07 32.5 0.0 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF138358 - 3.7e-05 23.6 0.2 0.00012 21.9 0.1 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase EF-hand_7 PF13499.6 ORF122386 - 7.4e-06 26.3 0.2 1.6e-05 25.3 0.2 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF122386 - 0.001 18.8 1.1 0.0093 15.8 0.1 2.8 3 0 0 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF122386 - 0.045 13.6 0.2 0.096 12.5 0.2 1.5 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF122386 - 0.055 13.0 0.0 0.16 11.6 0.0 1.8 1 0 0 1 1 1 0 EF hand WD40 PF00400.32 ORF111422 - 7.4e-43 143.7 26.7 7.2e-08 33.0 1.0 7.3 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF111422 - 3.2e-15 56.2 5.1 2.6e-05 24.4 0.1 6.5 1 1 6 7 7 7 5 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF111422 - 5.3e-06 26.4 0.6 0.0018 18.2 0.1 3.4 1 1 3 4 4 4 1 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 ORF111422 - 5e-05 22.8 4.8 0.039 13.3 4.7 2.9 1 1 1 2 2 2 2 WD40-like domain PALB2_WD40 PF16756.5 ORF111422 - 0.00012 21.2 2.8 0.0092 14.9 0.1 3.1 2 1 1 3 3 3 1 Partner and localizer of BRCA2 WD40 domain Ge1_WD40 PF16529.5 ORF111422 - 0.00032 19.8 3.2 0.19 10.6 0.0 3.3 2 2 1 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Nucleoporin_N PF08801.11 ORF111422 - 0.0012 17.6 1.5 2.4 6.8 0.1 3.3 1 1 1 3 3 3 2 Nup133 N terminal like Nup160 PF11715.8 ORF111422 - 0.061 12.0 6.8 1.5 7.3 0.5 4.0 2 2 2 4 4 4 0 Nucleoporin Nup120/160 PXT1 PF15214.6 ORF111422 - 0.083 13.3 0.0 0.25 11.7 0.0 1.7 1 0 0 1 1 1 0 Peroxisomal testis-specific protein 1 Fib_alpha PF08702.10 ORF111422 - 2.8 8.1 16.1 0.47 10.6 10.8 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Peptidase_C37 PF05416.12 ORF40024 - 0.082 11.4 5.0 0.11 11.0 5.0 1.1 1 0 0 1 1 1 0 Southampton virus-type processing peptidase DUF3278 PF11683.8 ORF40024 - 0.6 10.2 10.1 2.2 8.4 0.3 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3278) DUF21 PF01595.20 ORF140869 - 2.8e-29 102.0 2.4 5.7e-29 101.1 2.4 1.5 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 ORF140869 - 5e-09 36.5 1.0 0.0046 17.4 0.0 3.7 3 0 0 3 3 3 3 CBS domain YrhC PF14143.6 ORF140869 - 3.1 8.0 5.8 0.69 10.1 0.7 2.4 2 0 0 2 2 2 0 YrhC-like protein Sid-5 PF17204.3 ORF133771 - 0.14 12.4 2.4 0.35 11.1 0.1 2.7 2 0 0 2 2 2 0 Sid-5 family TRP PF06011.12 ORF133771 - 6.4 5.4 29.5 0.056 12.2 14.1 2.9 2 1 1 3 3 3 0 Transient receptor potential (TRP) ion channel EAL PF00563.20 ORF125854 - 1.5e-66 224.3 0.3 2.1e-66 223.9 0.3 1.2 1 0 0 1 1 1 1 EAL domain MASE1 PF05231.14 ORF125854 - 4.4e-38 131.1 10.7 5.7e-38 130.8 10.7 1.1 1 0 0 1 1 1 1 MASE1 Sm_multidrug_ex PF06695.11 ORF125854 - 0.27 11.9 2.1 0.4 11.3 0.2 2.2 3 0 0 3 3 3 0 Putative small multi-drug export protein EF-hand_7 PF13499.6 ORF121327 - 0.0093 16.4 0.0 0.46 11.0 0.0 2.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF121327 - 0.046 13.7 0.0 27 5.0 0.0 3.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 ORF121327 - 0.11 12.1 0.0 1.4 8.6 0.0 2.7 3 0 0 3 3 3 0 EF hand EF-hand_8 PF13833.6 ORF121327 - 0.12 12.2 0.0 12 5.8 0.0 3.1 2 1 1 3 3 3 0 EF-hand domain pair DUF3223 PF11523.8 ORF97061 - 3.7e-14 53.3 0.0 7.7e-14 52.3 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3223) ZZ PF00569.17 ORF74691 - 1.8e-14 53.3 6.4 3.9e-14 52.2 6.4 1.6 1 0 0 1 1 1 1 Zinc finger, ZZ type PB1 PF00564.24 ORF74691 - 3.1e-05 23.8 1.0 7.2e-05 22.6 1.0 1.7 1 0 0 1 1 1 1 PB1 domain N_BRCA1_IG PF16158.5 ORF74691 - 0.0023 18.6 0.1 0.0065 17.2 0.1 1.8 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene C1_2 PF03107.16 ORF74691 - 0.014 15.7 6.2 0.014 15.7 6.2 1.9 2 0 0 2 2 2 0 C1 domain eIF-5_eIF-2B PF01873.17 ORF74691 - 0.96 9.3 6.3 4.8 7.1 5.9 2.5 2 1 0 2 2 2 0 Domain found in IF2B/IF5 Nucleoporin_FG PF13634.6 ORF57599 - 6.1e-05 23.8 41.3 0.078 13.8 15.7 4.8 1 1 3 4 4 4 4 Nucleoporin FG repeat region ZZ PF00569.17 ORF46175 - 1.8e-14 53.3 6.4 3.9e-14 52.2 6.4 1.6 1 0 0 1 1 1 1 Zinc finger, ZZ type PB1 PF00564.24 ORF46175 - 3.1e-05 23.8 1.0 7.2e-05 22.6 1.0 1.7 1 0 0 1 1 1 1 PB1 domain N_BRCA1_IG PF16158.5 ORF46175 - 0.0023 18.6 0.1 0.0065 17.2 0.1 1.8 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene C1_2 PF03107.16 ORF46175 - 0.014 15.7 6.2 0.014 15.7 6.2 1.9 2 0 0 2 2 2 0 C1 domain eIF-5_eIF-2B PF01873.17 ORF46175 - 0.96 9.3 6.3 4.8 7.1 5.9 2.5 2 1 0 2 2 2 0 Domain found in IF2B/IF5 zf-RING_2 PF13639.6 ORF38903 - 4.1e-07 30.2 3.9 4.1e-07 30.2 3.9 8.3 8 1 1 9 9 9 2 Ring finger domain Prok-RING_4 PF14447.6 ORF38903 - 8.2e-06 25.6 6.4 8.2e-06 25.6 6.4 7.7 7 3 1 8 8 8 2 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF38903 - 7.9e-05 22.5 21.7 0.00056 19.8 10.4 7.7 5 3 1 6 6 6 2 zinc-RING finger domain zf-RING_11 PF17123.5 ORF38903 - 0.00039 20.1 5.0 0.00039 20.1 5.0 4.7 4 0 0 4 4 4 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF38903 - 0.0065 16.5 0.9 0.0065 16.5 0.9 7.3 7 1 0 7 7 7 2 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF38903 - 0.016 15.1 0.4 0.016 15.1 0.4 8.7 8 1 0 8 8 8 0 Zinc finger, C3HC4 type (RING finger) ZZ PF00569.17 ORF35800 - 1.8e-14 53.3 6.4 3.9e-14 52.2 6.4 1.6 1 0 0 1 1 1 1 Zinc finger, ZZ type PB1 PF00564.24 ORF35800 - 3.1e-05 23.8 1.0 7.2e-05 22.6 1.0 1.7 1 0 0 1 1 1 1 PB1 domain N_BRCA1_IG PF16158.5 ORF35800 - 0.0023 18.6 0.1 0.0065 17.2 0.1 1.8 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene C1_2 PF03107.16 ORF35800 - 0.014 15.7 6.2 0.014 15.7 6.2 1.9 2 0 0 2 2 2 0 C1 domain eIF-5_eIF-2B PF01873.17 ORF35800 - 0.96 9.3 6.3 4.8 7.1 5.9 2.5 2 1 0 2 2 2 0 Domain found in IF2B/IF5 Kinesin PF00225.23 ORF35575 - 2e-83 280.1 0.5 3.5e-83 279.3 0.5 1.4 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF35575 - 3.2e-14 53.1 0.0 8.5e-14 51.7 0.0 1.8 1 0 0 1 1 1 1 Microtubule binding AAA_16 PF13191.6 ORF35575 - 0.084 13.3 0.0 0.18 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain DUF3909 PF13077.6 ORF35575 - 0.38 10.9 3.8 14 5.9 0.6 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3909) Glutaredoxin2_C PF04399.13 ORF35575 - 1.1 9.1 3.4 1.8 8.4 0.4 2.4 2 0 0 2 2 2 0 Glutaredoxin 2, C terminal domain ResIII PF04851.15 ORF35575 - 4.4 7.3 6.3 0.53 10.3 0.9 2.2 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit Nucleoporin_FG PF13634.6 ORF146658 - 6.1e-05 23.8 41.3 0.078 13.8 15.7 4.8 1 1 3 4 4 4 4 Nucleoporin FG repeat region NUP50 PF08911.11 ORF146658 - 2.3 9.0 11.6 0.066 13.9 1.5 3.5 2 2 0 2 2 2 0 NUP50 (Nucleoporin 50 kDa) T2SSC PF11356.8 ORF146658 - 9.3 6.1 10.0 1.8 8.5 0.6 3.9 2 2 2 4 4 4 0 Type II secretion system protein C Kinesin PF00225.23 ORF138255 - 2e-83 280.1 0.5 3.5e-83 279.3 0.5 1.4 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF138255 - 3.2e-14 53.1 0.0 8.5e-14 51.7 0.0 1.8 1 0 0 1 1 1 1 Microtubule binding AAA_16 PF13191.6 ORF138255 - 0.084 13.3 0.0 0.18 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain DUF3909 PF13077.6 ORF138255 - 0.38 10.9 3.8 14 5.9 0.6 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3909) Glutaredoxin2_C PF04399.13 ORF138255 - 1.1 9.1 3.4 1.8 8.4 0.4 2.4 2 0 0 2 2 2 0 Glutaredoxin 2, C terminal domain ResIII PF04851.15 ORF138255 - 4.4 7.3 6.3 0.53 10.3 0.9 2.2 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit TPR_1 PF00515.28 ORF127234 - 4.2e-30 102.3 11.7 6.4e-06 25.8 0.0 7.7 8 0 0 8 8 7 6 Tetratricopeptide repeat TPR_2 PF07719.17 ORF127234 - 1e-22 78.4 13.6 0.0047 16.9 0.0 7.6 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_8 PF13181.6 ORF127234 - 8.9e-19 66.1 6.3 0.017 15.3 0.2 7.5 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF127234 - 1.8e-17 62.7 10.8 1e-08 34.7 0.1 6.4 7 1 2 9 9 9 4 TPR repeat TPR_16 PF13432.6 ORF127234 - 3.3e-14 53.2 6.5 3e-07 31.0 0.1 4.9 5 0 0 5 5 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF127234 - 9.4e-14 51.5 12.4 0.036 14.4 0.2 6.5 3 3 2 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF127234 - 3.4e-12 46.7 8.5 0.0082 16.6 0.0 5.1 4 1 1 6 6 4 4 Tetratricopeptide repeat TPR_17 PF13431.6 ORF127234 - 4.8e-11 42.2 11.0 0.12 12.9 0.5 6.9 8 0 0 8 8 6 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF127234 - 1e-07 32.2 8.7 1.8 9.6 0.0 6.7 2 2 6 8 8 8 3 Tetratricopeptide repeat TPR_9 PF13371.6 ORF127234 - 7.5e-07 29.2 1.5 0.034 14.3 0.0 3.6 1 1 2 3 3 3 2 Tetratricopeptide repeat ChAPs PF09295.10 ORF127234 - 1.2e-06 27.8 0.6 0.0036 16.4 0.0 2.8 1 1 2 3 3 3 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_10 PF13374.6 ORF127234 - 5.2e-05 23.0 2.7 3.1 7.8 0.1 5.3 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_20 PF14561.6 ORF127234 - 0.00048 20.4 1.4 0.89 9.9 0.4 3.8 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF127234 - 0.00067 20.1 5.4 35 5.3 0.0 6.8 7 0 0 7 7 7 0 Tetratricopeptide repeat TOM20_plant PF06552.12 ORF127234 - 0.0013 18.6 0.6 0.0038 17.0 0.1 2.0 2 1 0 2 2 2 1 Plant specific mitochondrial import receptor subunit TOM20 TPR_7 PF13176.6 ORF127234 - 0.0026 17.7 8.7 14 5.9 0.0 6.0 8 0 0 8 8 6 0 Tetratricopeptide repeat TPR_21 PF09976.9 ORF127234 - 0.0035 17.1 2.9 13 5.5 0.3 3.4 2 1 1 3 3 3 0 Tetratricopeptide repeat-like domain TPR_15 PF13429.6 ORF127234 - 0.013 14.8 5.2 0.22 10.7 0.5 3.0 1 1 2 3 3 3 0 Tetratricopeptide repeat SRP_TPR_like PF17004.5 ORF127234 - 0.042 13.9 1.2 0.14 12.2 0.2 2.2 1 1 1 2 2 2 0 Putative TPR-like repeat ANAPC3 PF12895.7 ORF127234 - 0.17 12.1 16.4 6.3 7.1 2.2 4.2 2 1 2 4 4 4 0 Anaphase-promoting complex, cyclosome, subunit 3 PPTA PF01239.22 ORF127234 - 0.42 10.4 2.9 0.82 9.5 1.0 2.4 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat EST1_DNA_bind PF10373.9 ORF127234 - 0.74 9.2 3.1 6 6.3 0.1 2.6 2 1 0 2 2 2 0 Est1 DNA/RNA binding domain UDPGP PF01704.18 ORF12235 - 3.2e-15 55.7 0.0 5e-15 55.1 0.0 1.3 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase HECT PF00632.25 ORF112431 - 4.9e-69 233.2 0.0 7e-69 232.6 0.0 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Amidase PF01425.21 ORF82540 - 2.6e-83 280.5 0.0 3.5e-83 280.1 0.0 1.1 1 0 0 1 1 1 1 Amidase DUF5472 PF17566.2 ORF82540 - 0.044 13.7 0.0 0.12 12.4 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5472) SlyX PF04102.12 ORF73029 - 0.37 11.4 3.5 0.56 10.9 0.4 2.6 2 0 0 2 2 2 0 SlyX MecA_N PF05223.11 ORF73029 - 0.47 10.7 3.3 2.8 8.2 0.0 3.2 3 1 0 3 3 3 0 NTF2-like N-terminal transpeptidase domain Thioredoxin_6 PF13848.6 ORF58592 - 1.7e-10 41.1 2.5 1.7e-10 41.1 2.5 3.3 3 1 1 4 4 4 2 Thioredoxin-like domain DNA_pol3_delta PF06144.13 ORF58592 - 0.1 12.3 1.8 0.25 11.1 0.1 2.4 2 1 1 3 3 3 0 DNA polymerase III, delta subunit Thioredoxin_6 PF13848.6 ORF56158 - 1.7e-10 41.1 2.5 1.7e-10 41.1 2.5 3.3 3 1 1 4 4 4 2 Thioredoxin-like domain DNA_pol3_delta PF06144.13 ORF56158 - 0.1 12.3 1.8 0.25 11.1 0.1 2.4 2 1 1 3 3 3 0 DNA polymerase III, delta subunit ATP-grasp_5 PF13549.6 ORF328 - 4.5e-75 251.9 0.3 1.4e-74 250.3 0.1 1.9 2 0 0 2 2 2 1 ATP-grasp domain Acetyltransf_1 PF00583.25 ORF328 - 2.6e-09 37.3 0.0 5.9e-09 36.2 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 ORF328 - 8.6e-09 36.2 0.0 2.5e-08 34.7 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF328 - 0.00012 22.0 0.0 0.00025 21.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF328 - 0.00029 21.0 0.0 0.19 11.8 0.0 2.3 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF328 - 0.0087 16.5 0.0 0.02 15.3 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF328 - 0.02 14.8 0.0 0.1 12.6 0.0 2.1 2 0 0 2 2 2 0 FR47-like protein CPSase_L_D2 PF02786.17 ORF328 - 0.071 12.6 0.0 0.21 11.1 0.0 1.8 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Acetyltransf_CG PF14542.6 ORF328 - 0.094 12.9 0.1 0.54 10.4 0.0 2.2 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase Amidase PF01425.21 ORF142178 - 8.2e-77 259.1 0.0 1.7e-76 258.0 0.0 1.5 1 1 0 1 1 1 1 Amidase Kelch_6 PF13964.6 ORF128063 - 6e-12 45.4 0.1 1.7e-05 24.9 0.0 4.4 3 1 1 4 4 4 2 Kelch motif Kelch_4 PF13418.6 ORF128063 - 1.1e-11 44.5 0.0 2.3e-05 24.3 0.0 4.4 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF128063 - 3.7e-09 36.6 0.0 0.00071 19.8 0.0 3.7 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF128063 - 4.4e-09 35.8 0.6 4.4e-06 26.2 0.0 3.5 3 1 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 ORF128063 - 2.1e-06 27.5 0.0 0.046 13.7 0.0 4.5 4 0 0 4 4 4 1 Kelch motif Kelch_5 PF13854.6 ORF128063 - 3.8e-05 23.6 0.0 1.8 8.6 0.0 4.0 4 0 0 4 4 4 2 Kelch motif T3SchapCesA PF11439.8 ORF128063 - 0.00067 19.8 7.1 0.096 12.8 0.5 2.7 1 1 1 2 2 2 2 Type III secretion system filament chaperone CesA FtsX_ECD PF18075.1 ORF128063 - 0.15 12.7 2.1 2.4 8.8 0.6 3.3 2 1 1 3 3 3 0 FtsX extracellular domain Jnk-SapK_ap_N PF09744.9 ORF128063 - 0.73 10.0 7.5 2 8.6 7.0 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DUF2408 PF10303.9 ORF128063 - 1.9 9.0 12.3 2.4 8.7 2.3 3.7 2 1 2 4 4 4 0 Protein of unknown function (DUF2408) DUF1673 PF07895.11 ORF116888 - 0.056 13.2 1.1 0.11 12.2 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) Methyltransf_11 PF08241.12 ORF98383 - 5.1e-27 94.4 0.0 3.9e-15 56.3 0.0 3.0 3 0 0 3 3 2 2 Methyltransferase domain Methyltransf_25 PF13649.6 ORF98383 - 1.6e-26 92.8 0.0 1.4e-16 60.9 0.0 2.9 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 ORF98383 - 1.4e-21 77.0 0.0 7.7e-10 38.8 0.0 2.6 3 0 0 3 3 3 2 Methyltransferase domain Methyltransf_12 PF08242.12 ORF98383 - 2.1e-20 73.3 0.0 2.7e-09 37.7 0.0 2.6 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_31 PF13847.6 ORF98383 - 8.4e-20 71.1 0.0 3.6e-10 39.9 0.0 2.5 2 0 0 2 2 2 2 Methyltransferase domain CheR PF01739.18 ORF98383 - 9.6e-11 41.5 0.0 2e-05 24.1 0.0 2.6 2 0 0 2 2 2 2 CheR methyltransferase, SAM binding domain Methyltransf_PK PF05891.12 ORF98383 - 9.2e-09 35.1 0.0 5.5e-08 32.6 0.0 2.0 2 0 0 2 2 2 1 AdoMet dependent proline di-methyltransferase MTS PF05175.14 ORF98383 - 1.4e-08 34.5 0.0 8.1e-05 22.2 0.0 3.2 3 0 0 3 3 3 1 Methyltransferase small domain Ubie_methyltran PF01209.18 ORF98383 - 4.3e-08 32.8 0.0 0.0077 15.6 0.0 2.3 2 0 0 2 2 2 2 ubiE/COQ5 methyltransferase family NodS PF05401.11 ORF98383 - 7.8e-08 32.2 0.0 4.1e-05 23.3 0.0 2.2 2 0 0 2 2 2 2 Nodulation protein S (NodS) TehB PF03848.14 ORF98383 - 5.1e-07 29.3 0.0 5.8e-06 25.9 0.0 2.2 2 1 0 2 2 2 1 Tellurite resistance protein TehB Methyltransf_2 PF00891.18 ORF98383 - 1.7e-05 24.2 0.0 0.11 11.8 0.0 2.5 2 1 0 2 2 2 2 O-methyltransferase domain DUF938 PF06080.12 ORF98383 - 4.9e-05 23.2 0.0 0.00088 19.1 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF938) Methyltransf_29 PF03141.16 ORF98383 - 0.00046 18.9 0.0 0.087 11.4 0.0 2.2 2 0 0 2 2 2 2 Putative S-adenosyl-L-methionine-dependent methyltransferase TPMT PF05724.11 ORF98383 - 0.0012 18.5 0.0 0.99 9.0 0.0 2.8 2 0 0 2 2 2 2 Thiopurine S-methyltransferase (TPMT) FtsJ PF01728.19 ORF98383 - 0.0013 18.9 0.0 0.022 14.9 0.0 2.6 2 1 0 2 2 2 1 FtsJ-like methyltransferase Methyltransf_16 PF10294.9 ORF98383 - 0.0043 16.8 0.1 0.14 11.8 0.0 2.4 2 0 0 2 2 2 1 Lysine methyltransferase RrnaAD PF00398.20 ORF98383 - 0.011 14.8 0.0 0.023 13.8 0.0 1.5 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase CMAS PF02353.20 ORF98383 - 0.019 14.3 0.0 3.1 7.0 0.0 2.6 2 1 1 3 3 3 0 Mycolic acid cyclopropane synthetase DUF3419 PF11899.8 ORF98383 - 0.031 13.5 0.0 7.3 5.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3419) PCMT PF01135.19 ORF98383 - 0.035 13.9 0.1 12 5.6 0.0 2.5 3 0 0 3 3 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_9 PF08003.11 ORF98383 - 0.063 12.2 0.0 0.11 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) NNMT_PNMT_TEMT PF01234.17 ORF98383 - 0.099 11.8 0.0 14 4.8 0.0 3.3 3 1 1 4 4 4 0 NNMT/PNMT/TEMT family Paz_1 PF18349.1 ORF76111 - 1.4 9.0 10.7 9.8 6.2 0.1 3.7 2 1 0 4 4 4 0 PAZ domain RCC1_2 PF13540.6 ORF55992 - 1.3e-17 63.1 53.7 0.14 12.0 0.0 13.5 14 0 0 14 14 14 11 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 ORF55992 - 1.8e-06 28.4 0.0 32 5.1 0.0 9.0 13 0 0 13 13 13 0 Spectrin repeat Phage_P2_GpU PF06995.11 ORF55992 - 0.0025 17.4 0.9 95 2.6 0.0 6.4 8 1 1 9 9 9 0 Phage P2 GpU Yuri_gagarin PF15934.5 ORF55992 - 0.0069 16.3 0.0 1.1 9.0 0.0 2.9 2 0 0 2 2 2 1 Yuri gagarin Choline_sulf_C PF12411.8 ORF55992 - 0.12 12.2 0.4 15 5.5 0.0 4.2 4 0 0 4 4 4 0 Choline sulfatase enzyme C terminal DDE_Tnp_1_3 PF13612.6 ORF55992 - 0.94 9.5 4.6 97 2.9 0.0 4.9 6 0 0 6 6 6 0 Transposase DDE domain NOZZLE PF08744.10 ORF55992 - 6.6 6.1 17.9 0.54 9.7 0.6 3.6 3 1 0 4 4 4 0 Plant transcription factor NOZZLE Ribosomal_L29 PF00831.23 ORF55992 - 6.7 6.8 9.1 42 4.2 0.1 4.2 5 0 0 5 5 5 0 Ribosomal L29 protein Oxysterol_BP PF01237.18 ORF48247 - 6.8e-37 127.2 4.9 1.3e-35 122.9 4.9 2.1 1 1 0 1 1 1 1 Oxysterol-binding protein ER PF01133.17 ORF48247 - 0.063 13.3 0.5 0.16 12.0 0.1 1.8 2 0 0 2 2 2 0 Enhancer of rudimentary Paz_1 PF18349.1 ORF26103 - 1.4 9.0 10.7 9.8 6.2 0.1 3.7 2 1 0 4 4 4 0 PAZ domain zf-RING_2 PF13639.6 ORF86119 - 1.4e-07 31.7 4.8 1.4e-07 31.7 4.8 2.2 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF86119 - 5.7e-06 26.0 1.6 1.8e-05 24.4 1.6 1.9 1 0 0 1 1 1 1 RING-like zinc finger EF-hand_6 PF13405.6 ORF86119 - 5.3e-05 22.8 0.0 0.19 11.8 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain zf-RING_5 PF14634.6 ORF86119 - 0.00052 19.9 5.8 0.00052 19.9 5.8 2.4 2 1 0 2 2 2 1 zinc-RING finger domain EF-hand_1 PF00036.32 ORF86119 - 0.00075 18.9 0.0 0.52 10.0 0.0 2.7 2 0 0 2 2 2 2 EF hand zf-rbx1 PF12678.7 ORF86119 - 0.012 15.9 4.4 0.012 15.9 4.4 2.5 2 0 0 2 2 2 0 RING-H2 zinc finger domain zf-C3H2C3 PF17122.5 ORF86119 - 0.014 15.5 0.5 0.034 14.2 0.5 1.7 1 0 0 1 1 1 0 Zinc-finger EF-hand_7 PF13499.6 ORF86119 - 0.015 15.7 0.4 4.1 7.9 0.5 3.2 2 1 1 3 3 3 0 EF-hand domain pair zf-RING_UBOX PF13445.6 ORF86119 - 0.13 12.3 1.5 0.93 9.6 1.6 2.4 1 1 1 2 2 2 0 RING-type zinc-finger BBL5 PF07289.11 ORF86119 - 0.15 11.1 0.0 0.21 10.6 0.0 1.2 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein DUF5347 PF17282.2 ORF86119 - 0.19 12.0 0.0 0.4 11.0 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5347) zf-C3HC4_3 PF13920.6 ORF86119 - 0.32 10.9 17.5 0.02 14.8 8.1 2.6 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF86119 - 5.6 6.9 15.9 0.073 12.9 6.8 2.5 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF83002 - 1.4e-07 31.7 4.8 1.4e-07 31.7 4.8 2.2 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF83002 - 5.7e-06 26.0 1.6 1.8e-05 24.4 1.6 1.9 1 0 0 1 1 1 1 RING-like zinc finger EF-hand_6 PF13405.6 ORF83002 - 5.3e-05 22.8 0.0 0.19 11.8 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain zf-RING_5 PF14634.6 ORF83002 - 0.00052 19.9 5.8 0.00052 19.9 5.8 2.4 2 1 0 2 2 2 1 zinc-RING finger domain EF-hand_1 PF00036.32 ORF83002 - 0.00075 18.9 0.0 0.52 10.0 0.0 2.7 2 0 0 2 2 2 2 EF hand zf-rbx1 PF12678.7 ORF83002 - 0.012 15.9 4.4 0.012 15.9 4.4 2.5 2 0 0 2 2 2 0 RING-H2 zinc finger domain zf-C3H2C3 PF17122.5 ORF83002 - 0.014 15.5 0.5 0.034 14.2 0.5 1.7 1 0 0 1 1 1 0 Zinc-finger EF-hand_7 PF13499.6 ORF83002 - 0.015 15.7 0.4 4.1 7.9 0.5 3.2 2 1 1 3 3 3 0 EF-hand domain pair zf-RING_UBOX PF13445.6 ORF83002 - 0.13 12.3 1.5 0.93 9.6 1.6 2.4 1 1 1 2 2 2 0 RING-type zinc-finger BBL5 PF07289.11 ORF83002 - 0.15 11.1 0.0 0.21 10.6 0.0 1.2 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein DUF5347 PF17282.2 ORF83002 - 0.19 12.0 0.0 0.4 11.0 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5347) zf-C3HC4_3 PF13920.6 ORF83002 - 0.32 10.9 17.5 0.02 14.8 8.1 2.6 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF83002 - 5.6 6.9 15.9 0.073 12.9 6.8 2.5 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Peptidase_S10 PF00450.22 ORF61076 - 7.8e-72 243.0 6.0 7.8e-72 243.0 6.0 2.0 1 1 1 2 2 2 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF61076 - 4.7e-05 23.7 17.1 7.5e-05 23.0 16.2 1.9 1 1 1 2 2 2 1 EGF-like domain EGF_Tenascin PF18720.1 ORF61076 - 0.0066 16.5 2.8 0.016 15.2 2.8 1.7 1 0 0 1 1 1 1 Tenascin EGF domain MmgE_PrpD PF03972.14 ORF47338 - 3.9e-20 71.8 0.0 2.6e-13 49.3 0.0 3.1 3 0 0 3 3 3 3 MmgE/PrpD family Peptidase_C54 PF03416.19 ORF21822 - 7.3e-70 235.5 0.5 1.1e-69 234.9 0.5 1.3 1 0 0 1 1 1 1 Peptidase family C54 peroxidase PF00141.23 ORF20509 - 1.8e-43 148.9 0.0 3.7e-43 147.9 0.0 1.5 1 0 0 1 1 1 1 Peroxidase Fer2_BFD PF04324.15 ORF20509 - 3.3e-13 49.7 3.8 2e-11 44.0 5.8 2.3 2 0 0 2 2 2 1 BFD-like [2Fe-2S] binding domain Rubredoxin_C PF18267.1 ORF20509 - 6.5e-08 32.4 0.3 5.6e-07 29.4 0.3 2.3 1 1 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain LRR_9 PF14580.6 ORF142433 - 1.5e-24 86.4 20.4 1.7e-13 50.4 4.4 3.4 2 1 1 3 3 3 3 Leucine-rich repeat LRR_4 PF12799.7 ORF142433 - 3.1e-23 81.5 48.4 4.9e-08 33.2 1.4 6.8 5 1 3 8 8 8 6 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF142433 - 7.9e-19 67.2 37.8 3.8e-05 23.4 2.2 7.4 6 2 2 8 8 8 5 Leucine rich repeat TcdB_N PF12918.7 ORF142433 - 0.015 15.5 2.3 1.2 9.5 0.2 3.7 3 0 0 3 3 3 0 TcdB toxin N-terminal helical domain DUF2322 PF10084.9 ORF142433 - 0.32 11.1 4.3 5.4 7.1 0.1 3.8 3 2 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2322) LRR_5 PF13306.6 ORF142433 - 0.9 9.5 14.9 0.13 12.3 2.2 3.3 2 1 0 2 2 2 0 BspA type Leucine rich repeat region (6 copies) PEP-utilizers_C PF02896.18 ORF130842 - 3.4e-110 367.8 0.0 4.5e-110 367.4 0.0 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilisers_N PF05524.13 ORF130842 - 6.8e-24 84.3 1.0 1.5e-23 83.2 1.0 1.6 1 0 0 1 1 1 1 PEP-utilising enzyme, N-terminal PEP-utilizers PF00391.23 ORF130842 - 1.5e-15 56.6 0.1 1.5e-15 56.6 0.1 1.9 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain Lipase_GDSL PF00657.22 ORF130842 - 0.00072 19.6 0.0 0.15 12.0 0.0 2.2 2 0 0 2 2 2 2 GDSL-like Lipase/Acylhydrolase HpcH_HpaI PF03328.14 ORF130842 - 0.08 12.1 0.1 0.15 11.1 0.1 1.4 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family Sid-5 PF17204.3 ORF100499 - 0.41 10.8 0.1 0.41 10.8 0.1 2.6 2 0 0 2 2 2 0 Sid-5 family XRN_M PF17846.1 ORF84042 - 0.064 12.2 0.1 0.13 11.2 0.0 1.4 2 0 0 2 2 2 0 Xrn1 helical domain ECH_1 PF00378.20 ORF66308 - 4.1e-09 36.1 0.5 1.9e-08 33.9 0.2 2.3 2 1 0 2 2 2 1 Enoyl-CoA hydratase/isomerase TPR_12 PF13424.6 ORF66308 - 1.3e-06 28.5 25.0 0.0038 17.5 1.0 5.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF66308 - 0.025 15.1 0.1 0.025 15.1 0.1 5.5 3 2 2 5 5 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF66308 - 0.16 11.9 0.0 0.16 11.9 0.0 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF66308 - 0.23 11.6 10.8 1.3 9.2 0.0 4.8 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF66308 - 0.42 11.6 29.7 5.4 8.1 0.5 7.0 6 1 1 7 7 7 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF66308 - 0.42 11.4 0.0 0.28 11.9 0.1 6.7 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF66308 - 0.73 10.3 8.4 40 4.9 0.0 5.1 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF66308 - 1.4 9.3 12.7 2.3 8.6 0.2 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat HWE_HK PF07536.14 ORF66308 - 9.8 7.0 7.3 47 4.8 0.7 4.1 3 1 1 4 4 4 0 HWE histidine kinase TPR_1 PF00515.28 ORF57767 - 3.8e-99 320.9 23.4 3.2e-11 42.6 0.5 13.6 13 0 0 13 13 13 13 Tetratricopeptide repeat TPR_2 PF07719.17 ORF57767 - 2.7e-77 248.8 15.2 8.6e-09 34.9 0.2 13.7 13 1 0 13 13 13 13 Tetratricopeptide repeat TPR_11 PF13414.6 ORF57767 - 3.7e-59 196.1 36.7 2.7e-10 39.8 0.7 14.6 8 4 7 15 15 15 12 TPR repeat TPR_8 PF13181.6 ORF57767 - 1.1e-57 187.5 23.2 1.7e-07 30.9 0.1 13.8 13 1 0 13 13 13 10 Tetratricopeptide repeat TPR_17 PF13431.6 ORF57767 - 1.2e-57 188.2 16.0 5.2e-07 29.6 0.2 13.3 13 0 0 13 13 13 10 Tetratricopeptide repeat TPR_12 PF13424.6 ORF57767 - 3.7e-37 126.4 10.1 4.2e-08 33.4 0.3 9.2 5 4 6 11 11 11 10 Tetratricopeptide repeat TPR_16 PF13432.6 ORF57767 - 5.1e-35 119.8 0.0 5.3e-07 30.2 0.0 7.1 6 1 0 7 7 7 5 Tetratricopeptide repeat TPR_9 PF13371.6 ORF57767 - 3e-27 94.6 0.0 0.00069 19.7 0.0 8.4 3 3 7 10 10 10 8 Tetratricopeptide repeat TPR_6 PF13174.6 ORF57767 - 1.4e-24 85.1 4.6 0.0051 17.4 0.1 11.9 13 0 0 13 13 12 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF57767 - 2.2e-22 77.4 12.2 0.011 15.7 0.0 11.5 11 0 0 11 11 11 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF57767 - 2.8e-16 59.8 6.3 0.02 15.4 0.0 7.2 5 2 4 9 9 9 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF57767 - 3.8e-13 49.1 0.0 1.2 10.1 0.0 10.6 6 5 7 13 13 13 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 ORF57767 - 1.7e-10 40.2 12.9 4.1 7.0 0.0 9.7 9 1 0 9 9 9 1 SHNi-TPR NARP1 PF12569.8 ORF57767 - 3.3e-10 39.5 12.8 0.0067 15.4 0.5 5.2 2 1 3 6 6 6 3 NMDA receptor-regulated protein 1 TPR_10 PF13374.6 ORF57767 - 4.6e-08 32.7 9.6 0.71 9.8 0.0 9.4 11 0 0 11 11 10 1 Tetratricopeptide repeat MIT PF04212.18 ORF57767 - 2.1e-07 30.9 24.7 0.088 12.9 0.1 8.7 9 1 1 10 10 9 3 MIT (microtubule interacting and transport) domain TPR_5 PF12688.7 ORF57767 - 3.9e-06 27.1 1.5 3.6 7.9 0.0 5.6 5 0 0 5 5 5 1 Tetratrico peptide repeat DUF3856 PF12968.7 ORF57767 - 6.6e-06 26.3 1.0 48 4.0 0.0 7.7 3 2 4 8 8 8 0 Domain of Unknown Function (DUF3856) ANAPC3 PF12895.7 ORF57767 - 5.7e-05 23.3 11.5 0.091 13.0 0.5 5.4 3 2 3 6 6 6 2 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 ORF57767 - 0.00087 19.3 6.9 48 4.1 0.1 7.4 4 2 3 7 7 7 0 Fis1 C-terminal tetratricopeptide repeat Ubiq-assoc PF09145.10 ORF57767 - 0.0089 16.0 10.2 0.35 10.9 0.0 5.7 5 0 0 5 5 5 1 Ubiquitin-associated TPR_15 PF13429.6 ORF57767 - 0.01 15.1 0.0 55 2.8 0.0 4.9 4 2 0 4 4 4 0 Tetratricopeptide repeat Trefoil PF00088.18 ORF57767 - 0.051 13.5 0.3 10 6.1 0.1 2.5 2 0 0 2 2 2 0 Trefoil (P-type) domain SRP_TPR_like PF17004.5 ORF57767 - 0.1 12.6 0.2 0.1 12.6 0.2 3.7 2 2 1 3 3 3 0 Putative TPR-like repeat HapK PF11639.8 ORF57767 - 0.15 12.5 0.0 0.32 11.5 0.0 1.6 1 0 0 1 1 1 0 REDY-like protein HapK DUF357 PF04010.13 ORF57767 - 0.38 10.9 3.6 2.6 8.2 0.0 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF357) TPR_1 PF00515.28 ORF49765 - 3.8e-99 320.9 23.4 3.2e-11 42.6 0.5 13.6 13 0 0 13 13 13 13 Tetratricopeptide repeat TPR_2 PF07719.17 ORF49765 - 2.7e-77 248.8 15.2 8.6e-09 34.9 0.2 13.7 13 1 0 13 13 13 13 Tetratricopeptide repeat TPR_11 PF13414.6 ORF49765 - 3.7e-59 196.1 36.7 2.7e-10 39.8 0.7 14.6 8 4 7 15 15 15 12 TPR repeat TPR_8 PF13181.6 ORF49765 - 1.1e-57 187.5 23.2 1.7e-07 30.9 0.1 13.8 13 1 0 13 13 13 10 Tetratricopeptide repeat TPR_17 PF13431.6 ORF49765 - 1.2e-57 188.2 16.0 5.2e-07 29.6 0.2 13.3 13 0 0 13 13 13 10 Tetratricopeptide repeat TPR_12 PF13424.6 ORF49765 - 3.7e-37 126.4 10.1 4.2e-08 33.4 0.3 9.2 5 4 6 11 11 11 10 Tetratricopeptide repeat TPR_16 PF13432.6 ORF49765 - 5.1e-35 119.8 0.0 5.3e-07 30.2 0.0 7.1 6 1 0 7 7 7 5 Tetratricopeptide repeat TPR_9 PF13371.6 ORF49765 - 3e-27 94.6 0.0 0.00069 19.7 0.0 8.4 3 3 7 10 10 10 8 Tetratricopeptide repeat TPR_6 PF13174.6 ORF49765 - 1.4e-24 85.1 4.6 0.0051 17.4 0.1 11.9 13 0 0 13 13 12 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF49765 - 2.2e-22 77.4 12.2 0.011 15.7 0.0 11.5 11 0 0 11 11 11 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF49765 - 2.8e-16 59.8 6.3 0.02 15.4 0.0 7.2 5 2 4 9 9 9 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF49765 - 3.8e-13 49.1 0.0 1.2 10.1 0.0 10.6 6 5 7 13 13 13 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 ORF49765 - 1.7e-10 40.2 12.9 4.1 7.0 0.0 9.7 9 1 0 9 9 9 1 SHNi-TPR NARP1 PF12569.8 ORF49765 - 3.3e-10 39.5 12.8 0.0067 15.4 0.5 5.2 2 1 3 6 6 6 3 NMDA receptor-regulated protein 1 TPR_10 PF13374.6 ORF49765 - 4.6e-08 32.7 9.6 0.71 9.8 0.0 9.4 11 0 0 11 11 10 1 Tetratricopeptide repeat MIT PF04212.18 ORF49765 - 2.1e-07 30.9 24.7 0.088 12.9 0.1 8.7 9 1 1 10 10 9 3 MIT (microtubule interacting and transport) domain TPR_5 PF12688.7 ORF49765 - 3.9e-06 27.1 1.5 3.6 7.9 0.0 5.6 5 0 0 5 5 5 1 Tetratrico peptide repeat DUF3856 PF12968.7 ORF49765 - 6.6e-06 26.3 1.0 48 4.0 0.0 7.7 3 2 4 8 8 8 0 Domain of Unknown Function (DUF3856) ANAPC3 PF12895.7 ORF49765 - 5.7e-05 23.3 11.5 0.091 13.0 0.5 5.4 3 2 3 6 6 6 2 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 ORF49765 - 0.00087 19.3 6.9 48 4.1 0.1 7.4 4 2 3 7 7 7 0 Fis1 C-terminal tetratricopeptide repeat Ubiq-assoc PF09145.10 ORF49765 - 0.0089 16.0 10.2 0.35 10.9 0.0 5.7 5 0 0 5 5 5 1 Ubiquitin-associated TPR_15 PF13429.6 ORF49765 - 0.01 15.1 0.0 55 2.8 0.0 4.9 4 2 0 4 4 4 0 Tetratricopeptide repeat Trefoil PF00088.18 ORF49765 - 0.051 13.5 0.3 10 6.1 0.1 2.5 2 0 0 2 2 2 0 Trefoil (P-type) domain SRP_TPR_like PF17004.5 ORF49765 - 0.1 12.6 0.2 0.1 12.6 0.2 3.7 2 2 1 3 3 3 0 Putative TPR-like repeat HapK PF11639.8 ORF49765 - 0.15 12.5 0.0 0.32 11.5 0.0 1.6 1 0 0 1 1 1 0 REDY-like protein HapK DUF357 PF04010.13 ORF49765 - 0.38 10.9 3.6 2.6 8.2 0.0 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF357) DUF4046 PF13255.6 ORF48801 - 0.046 14.3 2.8 0.69 10.5 0.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF4046) HSP90 PF00183.18 ORF39363 - 2.7e-123 412.6 10.8 1.5e-122 410.2 10.8 1.9 1 1 0 1 1 1 1 Hsp90 protein HATPase_c_3 PF13589.6 ORF39363 - 2.4e-12 46.9 0.1 4.6e-12 45.9 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 ORF39363 - 2.9e-09 37.4 0.0 5.1e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECH_1 PF00378.20 ORF2337 - 4.1e-09 36.1 0.5 1.9e-08 33.9 0.2 2.3 2 1 0 2 2 2 1 Enoyl-CoA hydratase/isomerase TPR_12 PF13424.6 ORF2337 - 1.3e-06 28.5 25.0 0.0038 17.5 1.0 5.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF2337 - 0.025 15.1 0.1 0.025 15.1 0.1 5.5 3 2 2 5 5 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF2337 - 0.16 11.9 0.0 0.16 11.9 0.0 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF2337 - 0.23 11.6 10.8 1.3 9.2 0.0 4.8 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF2337 - 0.42 11.6 29.7 5.4 8.1 0.5 7.0 6 1 1 7 7 7 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF2337 - 0.42 11.4 0.0 0.28 11.9 0.1 6.7 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF2337 - 0.73 10.3 8.4 40 4.9 0.0 5.1 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF2337 - 1.4 9.3 12.7 2.3 8.6 0.2 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat HWE_HK PF07536.14 ORF2337 - 9.8 7.0 7.3 47 4.8 0.7 4.1 3 1 1 4 4 4 0 HWE histidine kinase UPF0029 PF01205.19 ORF94831 - 5.4e-17 62.1 0.0 1.1e-16 61.1 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF600 PF04634.12 ORF94831 - 6.9 6.7 9.9 0.11 12.6 0.4 2.6 3 0 0 3 3 3 0 Protein of unknown function, DUF600 Fib_alpha PF08702.10 ORF82056 - 0.0037 17.5 7.9 0.0037 17.5 7.9 5.7 3 2 0 5 5 5 1 Fibrinogen alpha/beta chain family UVR PF02151.19 ORF82056 - 0.019 14.7 4.6 0.019 14.7 4.6 4.8 4 0 0 4 4 4 0 UvrB/uvrC motif TPR_12 PF13424.6 ORF50162 - 2.2e-11 43.9 0.8 1.9e-08 34.5 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF50162 - 7e-06 25.8 17.2 0.0086 16.2 0.4 6.4 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF50162 - 9.7e-06 25.2 11.4 1.5e-05 24.6 0.5 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF50162 - 1.3e-05 25.4 4.7 5e-05 23.5 1.7 3.0 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 ORF50162 - 1.9e-05 24.4 11.2 0.00029 20.7 0.2 5.7 5 1 1 6 6 6 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF50162 - 9.1e-05 22.2 0.2 0.094 12.8 0.0 3.3 2 0 0 2 2 2 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 ORF50162 - 0.0029 17.0 0.4 0.024 14.1 0.0 2.7 3 0 0 3 3 3 1 SHNi-TPR TPR_11 PF13414.6 ORF50162 - 0.027 14.1 1.7 0.077 12.7 0.8 2.4 2 1 0 2 2 2 0 TPR repeat TPR_6 PF13174.6 ORF50162 - 0.28 11.9 1.2 3 8.7 0.0 3.4 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF5398 PF17376.2 ORF50162 - 0.4 11.3 0.1 0.4 11.3 0.1 3.7 2 1 2 4 4 4 0 Family of unknown function (DUF5398) Keratin_B2_2 PF13885.6 ORF145508 - 3.9e-05 23.5 184.3 0.034 14.1 34.9 5.1 1 1 3 4 4 4 1 Keratin, high sulfur B2 protein DUF4064 PF13273.6 ORF115160 - 0.0035 17.6 10.9 0.89 9.9 2.5 3.4 3 0 0 3 3 3 3 Protein of unknown function (DUF4064) SUR7 PF06687.12 ORF115160 - 1.5 8.4 0.0 1.5 8.4 0.0 3.2 2 1 0 2 2 2 0 SUR7/PalI family Kin17_mid PF10357.9 ORF80836 - 0.044 13.7 0.0 0.094 12.6 0.0 1.5 1 0 0 1 1 1 0 Domain of Kin17 curved DNA-binding protein FHA PF00498.26 ORF71288 - 3.7e-11 43.2 3.1 1.9e-09 37.8 0.5 3.5 3 0 0 3 3 3 1 FHA domain RINGv PF12906.7 ORF71288 - 1e-10 41.6 6.3 2.2e-10 40.5 6.3 1.7 1 0 0 1 1 1 1 RING-variant domain Yop-YscD_cpl PF16697.5 ORF71288 - 9.8e-07 29.0 0.0 9.2e-05 22.7 0.0 2.7 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain DUF1699 PF08004.11 ORF71288 - 0.028 14.1 1.2 0.09 12.5 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1699) zf-RING_2 PF13639.6 ORF71288 - 0.097 13.0 3.3 0.31 11.4 3.3 2.0 1 1 0 1 1 1 0 Ring finger domain MU2_FHA PF18221.1 ORF71288 - 0.15 12.1 0.1 0.48 10.5 0.0 1.8 2 0 0 2 2 2 0 Mutator 2 Fork head associated domain Na_trans_assoc PF06512.13 ORF71288 - 1.1 9.6 12.6 0.13 12.5 7.2 2.0 2 0 0 2 2 2 0 Sodium ion transport-associated DHHA2 PF02833.14 ORF62716 - 0.02 15.1 0.9 0.61 10.3 0.0 2.6 2 1 0 2 2 2 0 DHHA2 domain Molybdopterin PF00384.22 ORF39611 - 1e-93 314.7 0.0 1.5e-93 314.1 0.0 1.3 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 ORF39611 - 2e-26 92.2 0.0 4.1e-26 91.2 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain TPP_enzyme_M PF00205.22 ORF39611 - 0.013 15.2 0.3 5.3 6.8 0.1 2.4 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain VSP PF03302.13 ORF2628 - 0.0054 15.6 4.2 0.0054 15.6 4.2 1.5 2 0 0 2 2 2 1 Giardia variant-specific surface protein ACOX PF01756.19 ORF14890 - 4.6e-22 78.4 0.1 1.6e-21 76.7 0.0 2.0 2 1 0 2 2 2 1 Acyl-CoA oxidase Acyl-CoA_dh_M PF02770.19 ORF14890 - 2.3e-08 34.1 0.0 3.9e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_ox_N PF14749.6 ORF14890 - 0.0026 18.3 0.0 0.0069 16.9 0.0 1.7 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal DUF777 PF05606.11 ORF14890 - 0.081 12.7 0.9 0.38 10.5 0.0 2.2 2 1 0 2 2 2 0 Borrelia burgdorferi protein of unknown function (DUF777) Ion_trans PF00520.31 ORF125999 - 3.5e-21 75.6 12.7 4.7e-21 75.1 12.7 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF125999 - 7.3e-09 35.5 4.6 7.3e-09 35.5 4.6 2.0 2 1 0 2 2 2 1 Ion channel cNMP_binding PF00027.29 ORF125999 - 0.013 15.5 0.0 0.029 14.5 0.0 1.5 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain TPR_2 PF07719.17 ORF92636 - 7.2e-15 53.8 0.8 1.3e-05 24.9 0.0 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF92636 - 7.6e-10 38.2 3.4 4.5e-06 26.3 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF92636 - 4.3e-09 35.9 3.7 0.0038 17.3 0.1 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF92636 - 1.3e-06 28.6 0.0 0.0001 22.5 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF92636 - 0.00015 21.9 1.6 0.00029 21.0 1.6 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 ORF92636 - 0.00025 20.7 0.3 0.008 15.8 0.0 2.4 2 0 0 2 2 2 1 TPR repeat TPR_19 PF14559.6 ORF92636 - 0.00042 20.8 0.0 0.00094 19.6 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF92636 - 0.0034 17.7 0.2 0.011 16.0 0.2 2.0 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF92636 - 0.005 17.5 0.0 0.34 11.6 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF92636 - 0.022 14.8 0.1 0.3 11.2 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF92636 - 0.024 14.7 0.7 1.1 9.3 0.1 2.7 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_9 PF13371.6 ORF92636 - 0.062 13.5 0.0 3.1 8.0 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat YMF19 PF02326.15 ORF83654 - 0.096 13.5 0.1 0.096 13.5 0.1 4.0 2 1 2 4 4 4 0 Plant ATP synthase F0 TPR_2 PF07719.17 ORF5245 - 7.2e-15 53.8 0.8 1.3e-05 24.9 0.0 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF5245 - 7.6e-10 38.2 3.4 4.5e-06 26.3 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF5245 - 4.3e-09 35.9 3.7 0.0038 17.3 0.1 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF5245 - 1.3e-06 28.6 0.0 0.0001 22.5 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF5245 - 0.00015 21.9 1.6 0.00029 21.0 1.6 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 ORF5245 - 0.00025 20.7 0.3 0.008 15.8 0.0 2.4 2 0 0 2 2 2 1 TPR repeat TPR_19 PF14559.6 ORF5245 - 0.00042 20.8 0.0 0.00094 19.6 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF5245 - 0.0034 17.7 0.2 0.011 16.0 0.2 2.0 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF5245 - 0.005 17.5 0.0 0.34 11.6 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF5245 - 0.022 14.8 0.1 0.3 11.2 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF5245 - 0.024 14.7 0.7 1.1 9.3 0.1 2.7 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_9 PF13371.6 ORF5245 - 0.062 13.5 0.0 3.1 8.0 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat AceK PF06315.11 ORF47839 - 4.3e-245 814.5 0.0 4.9e-245 814.3 0.0 1.0 1 0 0 1 1 1 1 Isocitrate dehydrogenase kinase/phosphatase (AceK) DUF2840 PF11000.8 ORF47839 - 0.2 11.5 0.7 1.3 8.8 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2840) Casc1_N PF15927.5 ORF30874 - 1.8e-15 57.2 1.4 2.9e-15 56.5 1.4 1.3 1 0 0 1 1 1 1 Cancer susceptibility candidate 1 N-terminus UbiA PF01040.18 ORF148273 - 9.3e-59 198.8 21.2 9.3e-59 198.8 21.2 2.2 2 0 0 2 2 2 1 UbiA prenyltransferase family DUF3040 PF11239.8 ORF148273 - 0.032 14.5 0.5 0.032 14.5 0.5 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3040) Gly-zipper_OmpA PF13436.6 ORF148273 - 0.51 10.2 5.1 0.3 10.9 0.1 2.3 2 0 0 2 2 2 0 Glycine-zipper domain COX14 PF14880.6 ORF148273 - 0.52 10.2 0.0 0.52 10.2 0.0 3.4 3 1 0 3 3 3 0 Cytochrome oxidase c assembly DUF3104 PF11302.8 ORF112137 - 0.15 11.8 0.1 0.39 10.5 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3104) Chloroa_b-bind PF00504.21 ORF97726 - 1.1e-84 282.8 0.2 8.4e-33 114.2 0.0 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein Na_H_Exchanger PF00999.21 ORF62295 - 5.1e-46 157.2 35.3 6.5e-46 156.8 35.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family GerA PF03323.13 ORF62295 - 7.8 4.8 8.1 0.58 8.6 2.8 1.7 2 0 0 2 2 2 0 Bacillus/Clostridium GerA spore germination protein DUF1456 PF07308.13 ORF37776 - 0.02 15.2 0.5 3 8.2 0.1 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1456) Cation_ATPase PF13246.6 ORF37776 - 0.08 13.0 0.7 0.5 10.5 0.1 2.3 2 0 0 2 2 2 0 Cation transport ATPase (P-type) HSP90 PF00183.18 ORF24368 - 5.1e-235 781.2 30.3 6.4e-235 780.9 30.3 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF24368 - 0.086 12.8 1.0 0.34 10.9 0.1 2.2 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF24368 - 0.1 12.6 1.2 0.2 11.7 0.1 2.0 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF24368 - 0.69 9.9 2.8 27 4.8 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain Amidinotransf PF02274.17 ORF24368 - 6.1 5.8 9.1 0.49 9.4 0.1 2.2 2 0 0 2 2 2 0 Amidinotransferase DUF2201_N PF13203.6 ORF14428 - 0.0085 15.7 0.0 1.4 8.5 0.0 2.3 1 1 0 1 1 1 1 Putative metallopeptidase domain CSG2 PF16965.5 ORF14428 - 0.96 8.3 3.1 0.63 8.9 0.3 2.1 2 1 1 3 3 3 0 Ceramide synthase regulator DUF4834 PF16118.5 ORF14428 - 1.1 10.3 0.0 1.1 10.3 0.0 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4834) Phage_holin_3_6 PF07332.11 ORF14428 - 1.9 8.5 8.6 0.075 13.1 1.5 2.1 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III ATP-synt_I PF03899.15 ORF143760 - 0.026 14.9 1.6 2.1 8.7 0.3 2.3 2 0 0 2 2 2 0 ATP synthase I chain Bestrophin PF01062.21 ORF143760 - 0.063 12.6 0.3 0.12 11.7 0.3 1.5 1 1 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel tRNA-synt_1d PF00750.19 ORF137781 - 1e-113 379.8 1.1 1.5e-113 379.3 1.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF137781 - 1.9e-22 79.6 0.1 4.6e-22 78.4 0.1 1.7 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 ORF137781 - 7.7e-06 26.4 0.1 4.5e-05 23.9 0.1 2.3 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF137781 - 0.019 14.3 0.0 0.034 13.5 0.0 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain TPR_12 PF13424.6 ORF128551 - 3.3e-70 232.4 56.8 1.7e-14 53.9 4.1 6.6 3 1 5 8 8 8 7 Tetratricopeptide repeat TPR_10 PF13374.6 ORF128551 - 1.1e-66 219.1 29.5 8.4e-11 41.4 0.7 7.7 7 0 0 7 7 7 7 Tetratricopeptide repeat TPR_1 PF00515.28 ORF128551 - 5.9e-11 41.7 0.9 1.6 8.7 0.0 7.7 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF128551 - 1.2e-08 34.5 0.3 0.89 9.9 0.0 6.6 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF128551 - 3.2e-07 30.3 27.1 0.00031 21.1 0.9 8.0 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF128551 - 7.6e-07 28.7 22.5 0.11 12.5 0.2 7.9 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF128551 - 9e-07 28.6 18.0 0.97 9.7 0.0 8.1 8 0 0 8 8 8 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF128551 - 5.5e-05 23.7 35.9 0.1 13.4 0.6 8.5 5 2 4 9 9 8 1 Tetratricopeptide repeat TPR_5 PF12688.7 ORF128551 - 0.00027 21.2 21.5 0.0046 17.2 2.0 4.3 1 1 4 5 5 5 2 Tetratrico peptide repeat Vac_Fusion PF02346.16 ORF128551 - 0.0004 19.9 4.9 1 9.1 0.1 5.0 5 1 1 6 6 6 1 Chordopoxvirus multifunctional envelope protein A27 TPR_20 PF14561.6 ORF128551 - 0.051 13.9 14.8 0.96 9.8 1.5 5.0 1 1 2 4 4 4 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF128551 - 0.058 13.8 3.2 59 4.4 0.0 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF128551 - 0.1 13.3 28.0 0.081 13.6 3.4 6.8 5 1 1 6 6 6 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF128551 - 0.18 12.5 6.0 7.6 7.4 0.0 5.2 6 0 0 6 6 5 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF128551 - 0.29 11.4 8.3 21 5.4 0.0 5.4 5 1 0 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 HEAT_PBS PF03130.16 ORF128551 - 0.4 11.5 4.3 3.6 8.5 0.1 3.7 3 0 0 3 3 2 0 PBS lyase HEAT-like repeat DUF5588 PF17826.1 ORF128551 - 0.42 9.4 16.7 1.2 8.0 0.1 5.4 2 2 3 6 6 6 0 Family of unknown function (DUF5588) TPR_19 PF14559.6 ORF128551 - 0.93 10.0 25.8 0.73 10.4 1.5 5.6 3 1 5 8 8 8 0 Tetratricopeptide repeat Anoctamin PF04547.12 ORF84915 - 2e-50 172.0 5.1 2.8e-50 171.5 5.1 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel DUF1195 PF06708.11 ORF84915 - 0.13 12.0 0.1 0.28 10.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1195) DUF4064 PF13273.6 ORF84915 - 0.61 10.4 4.9 4.5 7.6 0.0 4.0 3 2 2 5 5 5 0 Protein of unknown function (DUF4064) RSN1_7TM PF02714.15 ORF84915 - 0.79 9.0 9.7 0.52 9.6 3.5 3.0 3 0 0 3 3 3 0 Calcium-dependent channel, 7TM region, putative phosphate DUF2207 PF09972.9 ORF84915 - 1.4 7.6 9.3 0.38 9.5 0.3 2.9 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) Presenilin PF01080.17 ORF84915 - 3 6.5 5.5 1.6 7.4 3.4 1.5 2 0 0 2 2 2 0 Presenilin Ank_3 PF13606.6 ORF55915 - 0.021 15.3 0.0 0.12 13.0 0.0 2.4 1 0 0 1 1 1 0 Ankyrin repeat Ank_2 PF12796.7 ORF55915 - 0.058 14.0 0.0 0.16 12.6 0.0 1.7 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) CDC45 PF02724.14 ORF55915 - 1 7.5 11.1 1.4 7.1 11.1 1.1 1 0 0 1 1 1 0 CDC45-like protein AAA_23 PF13476.6 ORF55915 - 3.5 8.1 14.2 0.26 11.8 6.5 2.4 2 0 0 2 2 2 0 AAA domain zf-C3HC4_3 PF13920.6 ORF44152 - 1.3 8.9 13.6 3.7 7.5 13.6 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) C1_1 PF00130.22 ORF44152 - 4.6 7.2 12.8 1.4 8.9 7.7 2.6 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) BBS1 PF14779.6 ORF38201 - 7e-85 284.5 0.0 3.2e-82 275.8 0.0 2.3 2 0 0 2 2 2 2 Ciliary BBSome complex subunit 1 PHTB1_N PF14727.6 ORF38201 - 7.8e-13 48.6 0.2 0.0001 21.8 0.1 3.1 2 1 0 3 3 3 3 PTHB1 N-terminus BBS2_Mid PF14783.6 ORF38201 - 1.2e-07 31.7 0.2 0.014 15.5 0.1 3.8 2 1 2 4 4 4 2 Ciliary BBSome complex subunit 2, middle region PQQ_3 PF13570.6 ORF38201 - 0.06 13.9 0.1 13 6.4 0.0 4.2 5 0 0 5 5 5 0 PQQ-like domain DEC-1_N PF04625.13 ORF152337 - 0.72 8.8 5.1 1.3 7.9 5.1 1.4 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Amidase PF01425.21 ORF144130 - 1.9e-96 323.8 0.0 2.3e-96 323.5 0.0 1.0 1 0 0 1 1 1 1 Amidase CENP-F_leu_zip PF10473.9 ORF128467 - 0.0046 17.0 19.7 0.0046 17.0 19.7 3.9 2 1 1 3 3 3 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Tropomyosin PF00261.20 ORF128467 - 0.34 10.3 55.9 0.3 10.4 4.0 4.0 2 1 1 3 3 3 0 Tropomyosin DUF2968 PF11180.8 ORF128467 - 1.1 8.9 31.0 0.43 10.2 6.8 3.7 3 1 1 4 4 4 0 Protein of unknown function (DUF2968) Cyclase_polyket PF04673.12 ORF128467 - 1.7 8.9 7.1 6.3 7.1 0.2 3.6 3 0 0 3 3 3 0 Polyketide synthesis cyclase DNA_pol_B PF00136.21 ORF120239 - 3.8e-105 352.2 0.1 4.7e-105 351.9 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase family B zf-DNA_Pol PF08996.10 ORF120239 - 3e-06 27.1 0.4 7.1e-06 25.9 0.4 1.6 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger Carbpep_Y_N PF05388.11 ORF120239 - 0.6 10.6 3.8 0.32 11.5 0.4 2.3 3 0 0 3 3 3 0 Carboxypeptidase Y pro-peptide DNA_pol_B PF00136.21 ORF107963 - 3.8e-105 352.2 0.1 4.7e-105 351.9 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase family B zf-DNA_Pol PF08996.10 ORF107963 - 3e-06 27.1 0.4 7.1e-06 25.9 0.4 1.6 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger Carbpep_Y_N PF05388.11 ORF107963 - 0.6 10.6 3.8 0.32 11.5 0.4 2.3 3 0 0 3 3 3 0 Carboxypeptidase Y pro-peptide HSP70 PF00012.20 ORF91592 - 9.6e-10 37.3 0.0 7.9e-05 21.0 0.0 2.2 2 0 0 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 ORF91592 - 0.049 12.4 0.0 7.5 5.3 0.0 2.4 2 0 0 2 2 2 0 MreB/Mbl protein PKD_channel PF08016.12 ORF76905 - 1.9e-20 73.0 20.4 4.4e-18 65.2 12.9 2.1 2 0 0 2 2 2 2 Polycystin cation channel Ion_trans PF00520.31 ORF76905 - 2.8e-07 30.0 22.1 4.7e-07 29.3 22.1 1.3 1 0 0 1 1 1 1 Ion transport protein ZapB PF06005.12 ORF76905 - 0.03 14.8 1.3 0.03 14.8 1.3 2.1 3 0 0 3 3 3 0 Cell division protein ZapB YabA PF06156.13 ORF76905 - 0.2 12.3 7.6 0.057 14.1 3.1 2.2 2 0 0 2 2 2 0 Initiation control protein YabA DUF4389 PF14333.6 ORF31233 - 0.027 14.4 1.6 0.027 14.4 1.6 4.2 5 0 0 5 5 5 0 Domain of unknown function (DUF4389) cEGF PF12662.7 ORF31233 - 0.18 11.8 1.5 0.41 10.6 1.5 1.6 1 0 0 1 1 1 0 Complement Clr-like EGF-like TNFR_16_TM PF18422.1 ORF31233 - 3.8 7.5 14.5 0.32 11.0 2.5 4.0 3 0 0 3 3 3 0 Tumor necrosis factor receptor member 16 trans-membrane domain DUF4389 PF14333.6 ORF24888 - 0.027 14.4 1.6 0.027 14.4 1.6 4.6 6 0 0 6 6 6 0 Domain of unknown function (DUF4389) cEGF PF12662.7 ORF24888 - 0.18 11.7 1.5 0.41 10.6 1.5 1.6 1 0 0 1 1 1 0 Complement Clr-like EGF-like TNFR_16_TM PF18422.1 ORF24888 - 3.8 7.5 14.5 0.32 11.0 2.5 4.0 3 0 0 3 3 3 0 Tumor necrosis factor receptor member 16 trans-membrane domain DUF475 PF04332.15 ORF1613 - 0.0042 16.9 0.2 0.0072 16.1 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF475) DUF4389 PF14333.6 ORF127606 - 0.027 14.4 1.6 0.027 14.4 1.6 4.1 5 0 0 5 5 5 0 Domain of unknown function (DUF4389) cEGF PF12662.7 ORF127606 - 0.18 11.8 1.5 0.41 10.6 1.5 1.6 1 0 0 1 1 1 0 Complement Clr-like EGF-like TNFR_16_TM PF18422.1 ORF127606 - 3.8 7.6 14.5 0.32 11.0 2.5 4.0 3 0 0 3 3 3 0 Tumor necrosis factor receptor member 16 trans-membrane domain Peptidase_S10 PF00450.22 ORF118380 - 6.8e-78 262.9 0.0 9.8e-78 262.4 0.0 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF118380 - 4.2e-05 23.8 13.9 9.9e-05 22.6 13.9 1.7 1 0 0 1 1 1 1 EGF-like domain EGF_Tenascin PF18720.1 ORF118380 - 7.8e-05 22.6 3.9 0.00016 21.6 3.9 1.5 1 0 0 1 1 1 1 Tenascin EGF domain HSP70 PF00012.20 ORF115783 - 9.6e-10 37.3 0.0 7.9e-05 21.0 0.0 2.2 2 0 0 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 ORF115783 - 0.049 12.4 0.0 7.5 5.3 0.0 2.4 2 0 0 2 2 2 0 MreB/Mbl protein Aminotran_1_2 PF00155.21 ORF101966 - 2e-53 181.9 0.0 2.4e-53 181.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Guanylate_kin PF00625.21 ORF101966 - 1.6e-16 60.5 0.0 2.5e-16 59.9 0.0 1.3 1 0 0 1 1 1 1 Guanylate kinase Aminotran_5 PF00266.19 ORF101966 - 0.011 14.7 0.0 0.02 13.8 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF101966 - 0.015 13.8 0.0 0.042 12.4 0.0 1.7 2 0 0 2 2 2 0 Cys/Met metabolism PLP-dependent enzyme MBOAT PF03062.19 ORF94351 - 1.8e-17 63.8 29.3 4.2e-17 62.5 29.4 1.6 1 1 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family Pkinase PF00069.25 ORF82739 - 1.5e-30 106.5 0.0 2.7e-30 105.6 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82739 - 1e-21 77.4 0.0 2e-21 76.5 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF82739 - 1.3e-05 24.7 0.0 2.3e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF82739 - 0.26 10.0 0.0 0.26 10.0 0.0 2.0 2 1 0 2 2 2 0 Fungal protein kinase Atg14 PF10186.9 ORF50339 - 0.0011 18.1 1.9 0.0025 17.0 1.9 1.5 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Mitofilin PF09731.9 ORF50339 - 4.2 6.1 10.4 6.2 5.5 10.4 1.2 1 0 0 1 1 1 0 Mitochondrial inner membrane protein DUF760 PF05542.11 ORF29785 - 0.011 16.1 0.2 0.43 11.0 0.1 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF760) TPR_14 PF13428.6 ORF149736 - 0.0032 18.1 0.0 0.15 12.9 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 ORF149736 - 0.0059 16.6 0.4 0.0059 16.6 0.4 3.5 3 1 0 3 3 3 1 Mad3/BUB1 homology region 1 TPR_15 PF13429.6 ORF149736 - 0.062 12.5 0.1 1.2 8.3 0.0 2.5 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF2931 PF11153.8 NODE_4619_length_1771_cov_399.164171_g3293_i0forward_frame_3 - 0.17 11.5 0.1 0.3 10.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) Pkinase PF00069.25 ORF57062 - 7.3e-37 127.2 1.3 1.6e-36 126.1 0.1 2.0 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57062 - 1.5e-26 93.3 0.0 2.5e-26 92.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF547 PF04784.14 ORF57062 - 1.2e-12 47.9 1.2 1.6e-12 47.5 0.2 1.8 2 0 0 2 2 2 1 Protein of unknown function, DUF547 Kinase-like PF14531.6 ORF57062 - 3e-08 33.3 0.0 5.6e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Kinase-like DEP PF00610.21 ORF57062 - 6.4e-08 32.6 0.2 1.6e-07 31.3 0.2 1.7 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) PdaC PF13739.6 ORF57062 - 8.8 7.4 14.7 0.18 12.8 0.6 3.7 3 2 0 3 3 3 0 Deacetylase PdaC CBP PF12192.8 ORF54536 - 0.095 12.9 4.7 1.7 8.9 0.3 3.0 2 0 0 2 2 2 0 Fungal calcium binding protein Kelch_3 PF13415.6 ORF41736 - 6.1e-33 112.5 3.7 1.3e-09 38.0 0.1 8.0 8 0 0 8 8 8 5 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF41736 - 1.9e-31 107.8 8.3 1.2e-07 31.6 0.1 6.4 6 0 0 6 6 6 6 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF41736 - 2e-31 107.2 2.6 2.8e-08 33.7 0.0 6.4 6 0 0 6 6 6 6 Kelch motif Kelch_1 PF01344.25 ORF41736 - 6e-29 99.4 4.2 1.2e-09 37.6 0.0 6.4 6 0 0 6 6 6 5 Kelch motif Kelch_5 PF13854.6 ORF41736 - 4.4e-23 80.8 7.0 1.1e-07 31.7 0.0 6.3 6 0 0 6 6 6 6 Kelch motif Kelch_2 PF07646.15 ORF41736 - 1.9e-20 71.9 5.2 2.8e-07 30.3 0.0 6.5 6 0 0 6 6 6 4 Kelch motif CBP PF12192.8 ORF32414 - 0.095 12.9 4.7 1.7 8.9 0.3 3.0 2 0 0 2 2 2 0 Fungal calcium binding protein CBP PF12192.8 ORF26072 - 0.095 12.9 4.7 1.7 8.9 0.3 3.0 2 0 0 2 2 2 0 Fungal calcium binding protein CBP PF12192.8 ORF150295 - 0.095 12.9 4.7 1.7 8.9 0.3 3.0 2 0 0 2 2 2 0 Fungal calcium binding protein Peptidase_M14 PF00246.24 ORF147616 - 6.1e-46 157.5 0.2 9.8e-46 156.8 0.2 1.3 1 0 0 1 1 1 1 Zinc carboxypeptidase ETRAMP PF09716.10 ORF147616 - 2.4 8.3 7.1 9.9 6.3 0.1 3.4 3 1 0 3 3 3 0 Malarial early transcribed membrane protein (ETRAMP) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks13.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks13.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks13.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks13.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 17:59:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NUP50 PF08911.11 NODE_39627_length_527_cov_12.719512_g32209_i0reverse_frame_2 - 0.16 12.6 0.0 0.26 12.0 0.0 1.3 1 0 0 1 1 1 0 NUP50 (Nucleoporin 50 kDa) APOBEC3 PF18771.1 NODE_39627_length_527_cov_12.719512_g32209_i0forward_frame_3 - 0.034 14.2 1.0 0.11 12.6 0.1 2.1 2 1 1 3 3 3 0 APOBEC3 SNAD4 PF18750.1 NODE_39627_length_527_cov_12.719512_g32209_i0forward_frame_3 - 0.036 14.2 0.2 0.1 12.7 0.0 1.8 2 0 0 2 2 2 0 Secreted Novel AID/APOBEC-like Deaminase 4 PRR18 PF15671.5 NODE_39620_length_527_cov_77.266260_g32202_i0forward_frame_2 - 0.093 12.6 6.8 0.16 11.8 6.8 1.3 1 0 0 1 1 1 0 Proline-rich protein family 18 C2-set PF05790.15 NODE_39602_length_527_cov_135.993902_g32186_i0reverse_frame_2 - 2.4 8.4 7.2 0.54 10.5 1.5 2.5 2 1 0 2 2 2 0 Immunoglobulin C2-set domain Erf4 PF10256.9 NODE_39591_length_527_cov_323.628049_g32175_i0reverse_frame_2 - 8.9e-06 25.8 0.1 1.6e-05 25.0 0.1 1.5 1 1 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family SCP-1 PF05483.12 NODE_39584_length_528_cov_2.176471_g32170_i0reverse_frame_2 - 0.019 13.0 0.0 0.024 12.6 0.0 1.0 1 0 0 1 1 1 0 Synaptonemal complex protein 1 (SCP-1) Pkinase PF00069.25 NODE_39582_length_528_cov_2.472617_g32168_i0reverse_frame_3 - 1.8e-11 43.9 3.2 3.4e-10 39.7 3.2 2.0 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_39582_length_528_cov_2.472617_g32168_i0reverse_frame_3 - 7.1e-10 38.6 0.3 1.2e-09 37.9 0.3 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Staphostatin_B PF09023.10 NODE_39582_length_528_cov_2.472617_g32168_i0reverse_frame_3 - 0.044 13.8 0.2 0.11 12.6 0.2 1.6 1 0 0 1 1 1 0 Staphostatin B Molybdopterin PF00384.22 NODE_39581_length_528_cov_2.626775_g32167_i0forward_frame_2 - 9.6e-27 94.0 0.0 1.2e-26 93.7 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase DUF1474 PF07342.11 NODE_39579_length_528_cov_2.983773_g32165_i0reverse_frame_3 - 0.058 13.9 1.9 2.7 8.6 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1474) MFS_1 PF07690.16 NODE_39579_length_528_cov_2.983773_g32165_i0forward_frame_2 - 9.2e-13 47.8 17.2 1.1e-12 47.6 17.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 NODE_39579_length_528_cov_2.983773_g32165_i0forward_frame_2 - 0.0029 16.5 14.6 0.0034 16.3 14.6 1.0 1 0 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 NODE_39579_length_528_cov_2.983773_g32165_i0forward_frame_2 - 1.5 7.6 21.7 0.082 11.8 14.6 2.1 1 1 1 2 2 2 0 Sugar (and other) transporter OATP PF03137.20 NODE_39579_length_528_cov_2.983773_g32165_i0forward_frame_2 - 8.2 4.6 15.9 0.26 9.5 7.5 2.2 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Antimicrobial19 PF08225.11 NODE_39569_length_528_cov_68.075051_g32156_i0forward_frame_2 - 0.021 14.4 0.0 0.069 12.8 0.0 2.0 1 0 0 1 1 1 0 Pseudin antimicrobial peptide UL11 PF11094.8 NODE_39567_length_528_cov_78.141988_g32154_i0reverse_frame_3 - 0.36 10.7 0.2 0.36 10.7 0.2 2.9 2 1 1 3 3 3 0 Membrane-associated tegument protein Crp PF00325.20 NODE_39558_length_528_cov_124.154158_g32145_i0forward_frame_2 - 0.16 11.6 0.2 0.73 9.5 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, crp family F5_F8_type_C PF00754.25 NODE_39549_length_528_cov_316.539554_g32136_i0forward_frame_2 - 4.7e-05 23.5 0.0 6.4e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 F5/8 type C domain XRCC1_N PF01834.16 NODE_39549_length_528_cov_316.539554_g32136_i0forward_frame_2 - 0.0035 17.4 0.0 0.0046 17.0 0.0 1.2 1 0 0 1 1 1 1 XRCC1 N terminal domain ANAPC10 PF03256.16 NODE_39549_length_528_cov_316.539554_g32136_i0forward_frame_2 - 0.0038 16.9 0.0 0.0051 16.5 0.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, subunit 10 (APC10) DUF1846 PF08903.11 ORF99892 - 0.017 13.7 0.3 0.039 12.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1846) DUF1910 PF08928.10 ORF95946 - 0.62 10.1 4.1 2.2 8.3 0.2 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF1910) FGFR3_TM PF18123.1 ORF91407 - 4.8 6.8 14.6 2.8 7.6 0.3 3.3 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain Bac_rhamnosid_C PF17390.2 ORF89658 - 0.094 12.5 0.0 19 5.2 0.0 2.5 2 1 0 2 2 2 0 Bacterial alpha-L-rhamnosidase C-terminal domain MSSP PF03940.13 ORF89658 - 1.1 9.0 17.8 2.7 7.6 5.6 3.2 3 0 0 3 3 3 0 Male specific sperm protein DUF3348 PF11828.8 ORF8802 - 5.4e-05 23.0 5.0 7e-05 22.6 5.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3348) Golgin_A5 PF09787.9 ORF8802 - 0.00037 20.0 6.6 0.00044 19.8 6.6 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 Seryl_tRNA_N PF02403.22 ORF8802 - 0.00039 20.6 4.2 0.011 15.9 2.7 2.2 1 1 1 2 2 2 1 Seryl-tRNA synthetase N-terminal domain DUF148 PF02520.17 ORF8802 - 0.001 19.1 3.9 0.001 19.1 3.9 1.6 1 1 0 1 1 1 1 Domain of unknown function DUF148 Spc7 PF08317.11 ORF8802 - 0.0034 16.3 9.6 0.008 15.1 9.6 1.5 1 1 0 1 1 1 1 Spc7 kinetochore protein DHR10 PF18595.1 ORF8802 - 0.0052 16.8 9.9 0.16 12.0 6.1 2.3 1 1 1 2 2 2 1 Designed helical repeat protein 10 domain TMF_TATA_bd PF12325.8 ORF8802 - 0.0072 16.5 9.0 0.0078 16.4 8.2 1.5 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding DUF3584 PF12128.8 ORF8802 - 0.0084 13.7 4.6 0.0097 13.5 4.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF3708 PF12501.8 ORF8802 - 0.0087 15.9 6.0 0.34 10.7 0.5 2.1 1 1 1 2 2 2 2 Phosphate ATP-binding cassette transporter DUF4201 PF13870.6 ORF8802 - 0.011 15.5 5.9 0.053 13.2 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) Filament PF00038.21 ORF8802 - 0.039 13.5 9.6 0.21 11.2 5.7 2.0 1 1 1 2 2 2 0 Intermediate filament protein HIP1_clath_bdg PF16515.5 ORF8802 - 0.052 14.2 12.1 0.067 13.8 11.2 1.7 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 FTCD_C PF04961.12 ORF8802 - 0.054 13.2 5.1 0.53 10.0 1.0 2.1 1 1 1 2 2 2 0 Formiminotransferase-cyclodeaminase DUF3461 PF11944.8 ORF8802 - 0.064 13.4 0.4 0.092 12.9 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3461) DUF4315 PF14193.6 ORF8802 - 0.077 13.0 1.3 0.35 10.9 1.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4315) Vps53_N PF04100.12 ORF8802 - 0.077 11.9 3.1 0.099 11.6 3.1 1.2 1 0 0 1 1 1 0 Vps53-like, N-terminal GrpE PF01025.19 ORF8802 - 0.084 12.5 3.0 0.11 12.1 3.0 1.2 1 0 0 1 1 1 0 GrpE Syntaxin_2 PF14523.6 ORF8802 - 0.088 13.2 7.6 0.16 12.4 7.4 1.4 1 1 0 1 1 1 0 Syntaxin-like protein APG6_N PF17675.1 ORF8802 - 0.091 13.3 9.9 0.13 12.8 9.6 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region PIN_8 PF18476.1 ORF8802 - 0.13 12.1 1.2 0.16 11.8 1.2 1.1 1 0 0 1 1 1 0 PIN like domain Gp-FAR-1 PF05823.12 ORF8802 - 0.13 12.6 2.6 0.26 11.7 0.5 2.1 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) ATG16 PF08614.11 ORF8802 - 0.15 12.3 11.5 0.9 9.7 11.6 1.9 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Mod_r PF07200.13 ORF8802 - 0.21 11.7 10.4 1.1 9.4 2.7 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein DUF4407 PF14362.6 ORF8802 - 0.22 10.9 5.4 0.28 10.5 5.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1664 PF07889.12 ORF8802 - 0.22 11.6 6.9 1.8 8.7 1.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FapA PF03961.13 ORF8802 - 0.23 10.0 2.7 0.26 9.9 2.7 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Apolipoprotein PF01442.18 ORF8802 - 0.23 11.3 10.9 0.76 9.6 10.9 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Exonuc_VII_L PF02601.15 ORF8802 - 0.35 10.4 6.6 0.38 10.3 6.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit COG2 PF06148.11 ORF8802 - 0.42 10.7 4.0 0.93 9.6 2.9 2.0 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 KELK PF15796.5 ORF8802 - 0.7 10.4 6.3 6.5 7.3 1.3 2.5 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Baculo_PEP_C PF04513.12 ORF8802 - 0.87 9.6 5.5 3.6 7.6 5.5 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus T3SSipB PF16535.5 ORF8802 - 0.88 10.0 11.0 1.8 9.0 11.0 1.6 1 1 0 1 1 1 0 Type III cell invasion protein SipB FliD_C PF07195.12 ORF8802 - 1.2 8.5 8.5 0.71 9.2 1.3 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Csm1_N PF18504.1 ORF8802 - 1.2 9.5 6.2 3.1 8.2 0.4 3.2 1 1 2 3 3 3 0 Csm1 N-terminal domain YabA PF06156.13 ORF8802 - 2 9.1 4.7 17 6.1 4.7 2.3 1 1 0 1 1 1 0 Initiation control protein YabA OmpH PF03938.14 ORF8802 - 3.6 7.9 9.3 11 6.3 9.3 1.9 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) FlxA PF14282.6 ORF8802 - 4.5 7.3 13.8 9.8 6.2 13.4 1.8 1 1 0 1 1 1 0 FlxA-like protein WXG100 PF06013.12 ORF8802 - 7.8 6.8 12.5 3.9 7.8 1.3 3.3 2 1 1 3 3 3 0 Proteins of 100 residues with WXG FlaC_arch PF05377.11 ORF85925 - 0.029 14.8 6.0 0.087 13.2 1.9 2.7 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF3450 PF11932.8 ORF85925 - 0.04 13.2 4.9 0.051 12.9 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ACD PF16671.5 ORF85925 - 0.079 11.3 0.1 0.12 10.7 0.1 1.3 1 0 0 1 1 1 0 Actin cross-linking domain LMBR1 PF04791.16 ORF85925 - 0.14 11.0 3.4 0.15 10.9 3.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DivIC PF04977.15 ORF85925 - 0.78 9.5 8.6 18 5.2 8.6 2.4 1 1 0 1 1 1 0 Septum formation initiator UPF0242 PF06785.11 ORF85925 - 1.8 8.6 14.5 0.29 11.2 10.3 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus KLRAQ PF10205.9 ORF85925 - 2.9 8.2 11.9 0.37 11.0 7.7 1.8 2 1 0 2 2 2 0 Predicted coiled-coil domain-containing protein bZIP_1 PF00170.21 ORF85925 - 3.2 7.9 12.0 0.15 12.2 3.0 2.8 2 1 1 3 3 3 0 bZIP transcription factor FGAR-AT_N PF18076.1 ORF85487 - 0.082 12.9 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase N-terminal DUF1846 PF08903.11 ORF84391 - 0.017 13.7 0.3 0.039 12.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1846) PD40 PF07676.12 ORF83847 - 0.041 13.8 0.0 7.5 6.6 0.0 2.6 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat ANAPC4_WD40 PF12894.7 ORF83847 - 0.19 12.0 0.0 3.3 8.1 0.0 2.5 1 1 2 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain Caps_synth_GfcC PF06251.11 ORF83168 - 1.9e-69 233.7 0.0 2.2e-69 233.6 0.0 1.0 1 0 0 1 1 1 1 Capsule biosynthesis GfcC DUF2085 PF09858.9 ORF80021 - 0.081 13.4 1.6 0.93 10.0 1.5 2.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2085) Helicase_C PF00271.31 ORF79765 - 1.1e-06 28.9 1.8 4.6e-06 26.9 1.2 2.1 2 1 0 2 2 2 1 Helicase conserved C-terminal domain Flavoprotein PF02441.19 ORF79765 - 0.0033 17.2 0.0 0.005 16.6 0.0 1.3 1 1 0 1 1 1 1 Flavoprotein RCC1_2 PF13540.6 ORF77165 - 6.2e-32 108.7 29.7 1.7e-09 37.2 1.8 5.1 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF4333 PF14230.6 ORF77165 - 0.0042 17.3 1.1 13 6.1 0.1 3.3 3 0 0 3 3 3 2 Domain of unknown function (DUF4333) RCC1 PF00415.18 ORF77165 - 0.01 16.4 29.5 1.1 9.9 0.3 6.6 5 3 2 7 7 7 0 Regulator of chromosome condensation (RCC1) repeat PQQ_3 PF13570.6 ORF77165 - 0.018 15.5 6.2 1.6 9.3 0.3 4.5 3 2 0 3 3 3 0 PQQ-like domain Ank_5 PF13857.6 ORF76515 - 3.4e-21 75.0 0.0 6.2e-09 36.0 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF76515 - 5.7e-19 68.5 0.0 6e-11 42.8 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF76515 - 6.7e-19 68.0 0.0 1.7e-05 25.2 0.0 4.0 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF76515 - 8.8e-14 51.2 0.0 8.9e-05 22.8 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF76515 - 4.5e-13 48.1 0.0 3e-05 24.1 0.0 3.7 4 0 0 4 4 4 2 Ankyrin repeat ADPrib_exo_Tox PF03496.14 ORF7575 - 0.034 13.5 0.2 0.036 13.4 0.2 1.2 1 0 0 1 1 1 0 ADP-ribosyltransferase exoenzyme DUF2804 PF10974.8 ORF7575 - 0.046 13.3 0.2 0.12 11.9 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2804) Aldo_ket_red PF00248.21 ORF75125 - 1.8e-25 89.8 1.6 2.6e-24 85.9 1.6 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family DUF585 PF04522.12 ORF74976 - 0.012 15.3 0.0 0.017 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF585) EF-hand_7 PF13499.6 ORF74822 - 2.4e-14 53.5 0.0 4e-14 52.8 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF74822 - 1.9e-13 48.9 0.1 2.2e-05 23.7 0.5 2.4 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF74822 - 1.4e-11 44.0 0.4 3.4e-05 23.6 0.1 2.5 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF74822 - 1.3e-09 37.1 0.0 1.9e-05 23.9 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF74822 - 3.9e-09 35.7 0.1 8.4e-05 22.2 0.0 2.4 1 1 1 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF74822 - 2.1e-07 31.2 0.2 2.8e-07 30.8 0.2 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF74822 - 3.1e-05 22.7 0.0 3.6e-05 22.5 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5580) EF-hand_11 PF08976.11 ORF74822 - 0.00019 22.2 0.1 0.0003 21.6 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF74822 - 0.0018 18.2 0.1 0.0045 16.9 0.1 1.6 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF74822 - 0.0027 18.0 0.1 0.0073 16.6 0.0 1.7 2 0 0 2 2 2 1 EF-hand domain Dockerin_1 PF00404.18 ORF74822 - 0.0078 16.4 0.4 2.4 8.4 0.0 2.3 2 0 0 2 2 2 2 Dockerin type I domain EF-hand_10 PF14788.6 ORF74822 - 0.008 16.0 0.0 0.54 10.2 0.1 2.2 1 1 1 2 2 2 2 EF hand TerB PF05099.13 ORF74822 - 0.01 15.8 0.5 0.022 14.7 0.5 1.5 1 1 0 1 1 1 0 Tellurite resistance protein TerB Ribosomal_L27_C PF18471.1 ORF74822 - 0.013 14.9 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal L27 protein C-terminal domain DUF2304 PF10066.9 ORF74802 - 0.09 13.0 0.7 0.2 11.9 0.7 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) DSPc PF00782.20 ORF74797 - 0.00064 19.5 0.0 0.00083 19.2 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Ank_2 PF12796.7 ORF69944 - 3e-28 98.2 2.1 1.3e-17 64.1 0.3 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF69944 - 1.2e-26 92.0 2.9 5.2e-05 23.5 0.1 5.4 5 1 0 5 5 5 5 Ankyrin repeat Ank_4 PF13637.6 ORF69944 - 4.5e-24 84.5 0.7 2.5e-08 34.3 0.0 4.6 3 2 1 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF69944 - 2.8e-20 72.1 2.8 9.1e-07 29.0 0.1 4.6 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF69944 - 3e-20 70.1 0.0 0.00017 21.8 0.0 5.3 6 0 0 6 6 6 4 Ankyrin repeat PK_C PF02887.16 ORF69944 - 0.011 16.0 0.1 0.94 9.7 0.1 2.8 2 1 1 3 3 3 0 Pyruvate kinase, alpha/beta domain Phage_tail_2 PF06199.11 ORF69944 - 0.024 14.8 0.8 5 7.2 0.0 3.0 1 1 2 3 3 3 0 Phage tail tube protein SufE PF02657.15 ORF69944 - 0.2 11.5 0.5 6.6 6.6 0.1 2.8 1 1 2 3 3 3 0 Fe-S metabolism associated domain Prok-E2_E PF14462.6 ORF6744 - 0.082 12.7 0.3 0.1 12.4 0.3 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family E CNOT1_TTP_bind PF16417.5 ORF64720 - 0.038 13.2 0.1 0.038 13.2 0.1 2.0 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Fibrillarin_2 PF10113.9 ORF64720 - 0.051 12.2 0.1 0.069 11.8 0.1 1.1 1 0 0 1 1 1 0 Fibrillarin-like archaeal protein Casc1_N PF15927.5 ORF64720 - 0.057 13.1 4.0 0.8 9.4 4.0 2.1 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus PQ-loop PF04193.14 ORF6373 - 3.3e-13 49.2 0.3 1e-12 47.6 0.3 2.0 1 0 0 1 1 1 1 PQ loop repeat MSV199 PF10553.9 ORF59058 - 0.1 12.9 1.2 0.16 12.2 0.5 1.7 1 1 0 1 1 1 0 MSV199 domain Zip PF02535.22 ORF59019 - 0.088 12.0 2.4 0.099 11.8 2.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter FYDLN_acid PF09538.10 ORF59019 - 0.26 12.0 7.0 0.45 11.2 7.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) Hid1 PF12722.7 ORF59019 - 6 4.9 6.4 7.1 4.6 6.4 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Presenilin PF01080.17 ORF59019 - 7.2 5.3 5.1 8.1 5.1 5.1 1.2 1 0 0 1 1 1 0 Presenilin Glutaredoxin2_C PF04399.13 ORF57262 - 2.3e-38 131.0 0.0 2.7e-38 130.7 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin 2, C terminal domain GST_N_3 PF13417.6 ORF57262 - 0.0063 16.9 0.0 0.017 15.5 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF57262 - 0.025 14.6 0.0 0.058 13.4 0.0 1.6 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DUF473 PF04322.12 ORF55277 - 0.031 14.1 0.0 0.065 13.1 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF473) GHD PF17834.1 ORF55277 - 0.033 14.2 0.7 0.11 12.5 0.1 2.0 2 0 0 2 2 2 0 Beta-sandwich domain in beta galactosidase DUF1700 PF08006.11 ORF55277 - 0.047 13.2 2.9 0.03 13.9 1.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1700) DUF3302 PF11742.8 ORF53308 - 0.11 12.6 0.2 0.23 11.6 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3302) DUF4213 PF13938.6 ORF52936 - 0.022 15.0 0.2 0.038 14.2 0.2 1.4 1 0 0 1 1 1 0 Putative heavy-metal chelation Pirin_C PF05726.13 ORF52395 - 1.3e-21 76.9 0.0 2.4e-21 76.0 0.0 1.4 2 0 0 2 2 2 1 Pirin C-terminal cupin domain IER PF05760.12 ORF50559 - 0.2 12.0 1.1 0.23 11.8 1.1 1.1 1 0 0 1 1 1 0 Immediate early response protein (IER) DUF4738 PF15889.5 ORF48824 - 0.012 15.4 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4738) Kelch_1 PF01344.25 ORF48099 - 1.6e-12 46.8 9.9 5.3e-12 45.1 0.2 3.8 4 0 0 4 4 4 2 Kelch motif Kelch_6 PF13964.6 ORF48099 - 1.5e-09 37.8 0.2 1.3e-06 28.5 0.0 2.9 1 1 2 3 3 3 2 Kelch motif Kelch_2 PF07646.15 ORF48099 - 6.2e-06 26.0 1.2 0.00023 21.0 0.0 3.2 4 0 0 4 4 4 1 Kelch motif Kelch_4 PF13418.6 ORF48099 - 0.0025 17.8 0.0 3.1 7.9 0.0 2.5 2 0 0 2 2 2 2 Galactose oxidase, central domain zf-RING_2 PF13639.6 ORF47617 - 6.6e-10 39.2 6.9 9.9e-10 38.6 6.9 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF47617 - 1.9e-06 27.6 6.8 3.6e-06 26.7 6.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF47617 - 2.6e-06 27.3 3.2 5.1e-06 26.4 3.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF47617 - 7.4e-06 25.6 5.4 1.9e-05 24.3 5.4 1.7 1 0 0 1 1 1 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF47617 - 1.8e-05 24.3 4.6 3.4e-05 23.4 4.6 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF47617 - 2.1e-05 24.4 5.1 3.4e-05 23.7 5.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF47617 - 0.00012 22.3 7.7 0.00034 20.8 7.7 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain FANCL_C PF11793.8 ORF47617 - 0.00016 21.8 6.4 0.0004 20.5 6.4 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 ORF47617 - 0.00037 20.3 6.5 0.00082 19.2 6.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF47617 - 0.002 18.2 3.8 0.0044 17.1 3.8 1.6 1 1 0 1 1 1 1 RING-variant domain zf-C3HC4_3 PF13920.6 ORF47617 - 0.0036 17.1 3.7 0.0056 16.5 3.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF47617 - 0.01 15.7 5.3 0.017 15.0 5.3 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF47617 - 0.011 15.9 4.1 0.022 14.9 4.1 1.6 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF47617 - 0.012 15.6 4.3 0.045 13.8 4.3 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zinc_ribbon_9 PF14369.6 ORF47617 - 0.041 14.2 1.1 0.11 12.8 0.3 2.0 2 0 0 2 2 2 0 zinc-ribbon zf-HC5HC2H_2 PF13832.6 ORF47617 - 0.052 13.7 3.6 0.063 13.4 2.4 1.8 1 1 0 1 1 1 0 PHD-zinc-finger like domain PHD PF00628.29 ORF47617 - 0.056 13.3 5.9 0.11 12.5 5.9 1.5 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 ORF47617 - 0.23 11.4 7.1 0.16 11.9 1.1 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 DAGK_cat PF00781.24 ORF45356 - 0.051 13.2 0.0 0.085 12.5 0.0 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain WDCP PF15390.6 ORF45356 - 0.086 11.2 0.0 0.1 11.0 0.0 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family rve PF00665.26 ORF4301 - 2.9e-12 46.8 0.0 4.3e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain DUF1295 PF06966.12 ORF3945 - 2e-13 50.4 0.4 2.6e-13 50.1 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF3945 - 4.8e-07 29.9 2.4 6.6e-07 29.4 2.4 1.3 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 ORF3945 - 0.00015 22.1 0.3 0.00015 22.1 0.3 1.9 2 0 0 2 2 2 1 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF3945 - 0.0082 14.9 0.5 0.0092 14.8 0.5 1.3 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family ICMT PF04140.14 ORF3945 - 0.055 13.9 0.1 0.055 13.9 0.1 2.0 2 1 0 2 2 2 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family zf-RING_11 PF17123.5 ORF38881 - 0.78 9.5 3.0 0.37 10.6 0.4 1.9 2 0 0 2 2 2 0 RING-like zinc finger HHH_9 PF17674.1 ORF36393 - 0.081 13.8 0.0 0.2 12.6 0.0 1.8 1 0 0 1 1 1 0 HHH domain PCI PF01399.27 ORF34335 - 6.3e-16 58.8 1.4 6.3e-16 58.8 1.4 1.6 2 0 0 2 2 2 1 PCI domain RPN5_C PF18098.1 ORF34335 - 3.3e-13 49.5 1.5 8.7e-13 48.1 1.5 1.8 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN5 C-terminal domain Pkinase PF00069.25 ORF34239 - 2.6e-35 122.1 0.0 3.3e-35 121.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF34239 - 1.9e-17 63.4 0.2 1.7e-15 57.0 0.2 2.0 1 1 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF34239 - 0.00023 20.6 0.0 0.00031 20.2 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF34239 - 0.0018 17.4 0.2 0.0024 17.0 0.2 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Kinase-like PF14531.6 ORF34239 - 0.0035 16.7 0.1 0.018 14.4 0.1 1.9 1 1 0 1 1 1 1 Kinase-like SHOCT PF09851.9 ORF34239 - 0.004 16.9 0.2 0.18 11.6 0.1 2.5 2 0 0 2 2 2 1 Short C-terminal domain RIO1 PF01163.22 ORF34239 - 0.027 14.1 0.1 0.038 13.6 0.1 1.2 1 0 0 1 1 1 0 RIO1 family FTA2 PF13095.6 ORF34239 - 0.11 12.1 0.1 0.15 11.7 0.1 1.3 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF34239 - 0.13 12.1 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family ComGG PF14173.6 ORF33603 - 0.022 15.2 0.8 0.041 14.3 0.8 1.4 1 0 0 1 1 1 0 ComG operon protein 7 TMEM171 PF15471.6 ORF33603 - 0.023 13.7 0.2 0.025 13.6 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein family 171 OCIA PF07051.11 ORF33603 - 0.089 12.8 0.1 0.18 11.9 0.1 1.5 1 0 0 1 1 1 0 Ovarian carcinoma immunoreactive antigen (OCIA) FlxA PF14282.6 ORF33547 - 0.0014 18.5 5.6 0.0036 17.3 5.5 1.7 1 1 1 2 2 2 1 FlxA-like protein DUF1204 PF06721.11 ORF33547 - 0.011 15.2 8.3 0.015 14.8 3.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1204) ComGG PF14173.6 ORF33547 - 0.024 15.0 1.6 0.028 14.8 0.5 1.7 2 0 0 2 2 2 0 ComG operon protein 7 DUF2205 PF10224.9 ORF33547 - 0.094 12.7 6.0 0.047 13.7 2.9 2.1 1 1 1 2 2 2 0 Short coiled-coil protein YabA PF06156.13 ORF33547 - 0.69 10.6 6.8 0.2 12.3 2.6 2.2 1 1 2 3 3 3 0 Initiation control protein YabA LMBR1 PF04791.16 ORF33547 - 7.1 5.4 7.2 7.9 5.3 7.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein CbiQ PF02361.16 ORF3261 - 0.063 12.9 0.2 0.1 12.2 0.2 1.3 1 0 0 1 1 1 0 Cobalt transport protein EF-hand_7 PF13499.6 ORF3237 - 6.1e-16 58.6 4.4 3e-07 30.8 0.2 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF3237 - 2.4e-15 54.8 7.7 6e-08 31.7 0.0 5.0 5 0 0 5 5 5 2 EF hand EF-hand_6 PF13405.6 ORF3237 - 3.4e-15 54.6 4.5 5.9e-08 32.0 0.0 4.4 4 1 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF3237 - 1.5e-07 31.2 6.5 0.0047 16.8 0.0 3.6 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF3237 - 9.5e-07 29.1 0.1 0.00057 20.1 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF3237 - 3.9e-05 22.9 6.8 0.00011 21.6 0.0 3.5 4 0 0 4 4 4 1 EF hand EF-hand_14 PF17959.1 ORF3237 - 6.5e-05 23.2 0.4 0.073 13.4 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain DUF3008 PF11450.8 ORF3237 - 0.1 12.8 0.3 0.2 11.9 0.3 1.4 1 0 0 1 1 1 0 Protein of unknwon function (DUF3008) KRAP_IP3R_bind PF14722.6 ORF3237 - 0.12 12.1 0.0 0.24 11.1 0.0 1.4 1 1 0 1 1 1 0 Ki-ras-induced actin-interacting protein-IP3R-interacting domain Acetyltransf_11 PF13720.6 ORF3237 - 0.14 12.7 0.0 0.85 10.1 0.0 2.1 2 0 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF1257 PF06868.11 ORF3237 - 0.16 12.3 0.0 0.26 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1257) DUF2884 PF11101.8 ORF31152 - 0.041 13.4 0.4 0.05 13.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) POM121 PF15229.6 ORF3020 - 1.1 8.9 10.5 0.17 11.5 7.1 1.4 2 0 0 2 2 2 0 POM121 family DUF2116 PF09889.9 ORF30099 - 2.3 8.3 7.1 5.7 7.0 0.8 2.7 1 1 1 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2085 PF09858.9 ORF29078 - 0.081 13.4 1.6 0.93 10.0 1.5 2.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2085) TMEM154 PF15102.6 ORF26584 - 0.97 9.3 6.1 1.7 8.5 6.1 1.3 1 0 0 1 1 1 0 TMEM154 protein family EF-hand_1 PF00036.32 ORF25948 - 5.8e-31 103.7 13.0 3.1e-07 29.5 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF25948 - 2.2e-25 86.3 8.8 2.1e-07 30.3 0.2 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF25948 - 2.1e-24 85.7 7.1 1.5e-13 50.9 0.4 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF25948 - 1.4e-22 78.1 10.1 9.8e-07 28.0 0.2 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF25948 - 2.4e-21 75.3 10.0 4.1e-11 42.5 0.1 4.3 3 1 1 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF25948 - 1.7e-10 41.2 3.0 0.00029 21.1 0.2 2.2 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF25948 - 5.5e-06 26.3 10.3 0.016 15.2 1.1 3.1 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_11 PF08976.11 ORF25948 - 6.9e-05 23.7 0.4 0.077 13.9 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain FAM184 PF15665.5 ORF25948 - 0.00087 19.1 0.6 0.0013 18.6 0.2 1.4 2 0 0 2 2 2 1 Family with sequence similarity 184, A and B Herpes_UL36 PF03586.13 ORF25948 - 0.001 18.5 0.2 0.26 10.5 0.1 2.2 1 1 0 2 2 2 2 Herpesvirus UL36 tegument protein Caleosin PF05042.13 ORF25948 - 0.0011 18.9 2.0 5.2 7.0 0.1 3.6 1 1 3 4 4 4 2 Caleosin related protein EF-hand_9 PF14658.6 ORF25948 - 0.0068 16.7 0.1 0.52 10.7 0.0 2.8 2 1 0 2 2 2 1 EF-hand domain Dockerin_1 PF00404.18 ORF25948 - 0.011 15.9 9.5 2.5 8.4 4.9 3.9 1 1 2 3 3 3 0 Dockerin type I domain VCBS PF13517.6 ORF25948 - 0.027 15.0 2.4 3.9 8.1 0.4 2.6 2 0 0 2 2 2 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella EF-hand_13 PF17958.1 ORF25948 - 0.09 12.6 0.1 17 5.3 0.0 2.7 2 1 1 3 3 3 0 EF-hand domain SdrD_B PF17210.3 ORF25948 - 3.3 8.0 7.6 2.2 8.6 1.9 2.7 1 1 0 2 2 2 0 SdrD B-like domain Orthopox_B11R PF07033.11 ORF25948 - 8 6.3 9.5 1.6 8.6 4.7 2.1 1 1 1 2 2 2 0 Orthopoxvirus B11R protein MSV199 PF10553.9 ORF25326 - 0.1 12.9 1.2 0.16 12.2 0.5 1.7 1 1 0 1 1 1 0 MSV199 domain zf-FCS PF06467.14 ORF24641 - 0.0073 16.2 0.1 0.28 11.2 0.1 2.4 2 0 0 2 2 2 1 MYM-type Zinc finger with FCS sequence motif zf-C2H2_11 PF16622.5 ORF24641 - 0.048 13.4 0.3 4.1 7.2 0.1 2.6 2 0 0 2 2 2 0 zinc-finger C2H2-type MIS13 PF08202.11 ORF23321 - 0.0048 16.2 1.7 0.0058 15.9 1.7 1.1 1 0 0 1 1 1 1 Mis12-Mtw1 protein family DUF707 PF05212.12 ORF23321 - 0.013 14.8 0.2 0.024 13.9 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF707) YGGT PF02325.17 ORF18992 - 1.4e-33 115.1 24.0 2.1e-18 66.5 3.8 2.5 2 1 1 3 3 3 2 YGGT family CNOT1_TTP_bind PF16417.5 ORF18605 - 0.038 13.2 0.1 0.038 13.2 0.1 2.0 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Fibrillarin_2 PF10113.9 ORF18605 - 0.051 12.2 0.1 0.069 11.8 0.1 1.1 1 0 0 1 1 1 0 Fibrillarin-like archaeal protein Casc1_N PF15927.5 ORF18605 - 0.057 13.1 4.0 0.8 9.4 4.0 2.1 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus MTHFR_C PF12225.8 ORF17000 - 0.0043 16.7 1.4 0.0063 16.1 1.4 1.3 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal Asn_synthase PF00733.21 ORF15785 - 2.1e-17 63.8 0.2 4.8e-14 52.8 0.2 2.1 1 1 0 1 1 1 1 Asparagine synthase Acyl-CoA_dh_1 PF00441.24 ORF15785 - 0.16 12.2 1.9 3.2 8.0 0.2 2.4 2 1 0 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain Rota_NS35 PF02509.14 ORF148934 - 0.0058 15.7 1.7 0.0062 15.6 1.3 1.4 1 1 0 1 1 1 1 Rotavirus non-structural protein 35 DUF4432 PF14486.6 ORF148934 - 0.068 12.0 0.1 0.085 11.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4432) DUF1846 PF08903.11 ORF146865 - 0.017 13.7 0.3 0.039 12.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1846) Rota_NS35 PF02509.14 ORF145375 - 0.0058 15.7 1.7 0.0062 15.6 1.3 1.4 1 1 0 1 1 1 1 Rotavirus non-structural protein 35 DUF4432 PF14486.6 ORF145375 - 0.068 12.0 0.1 0.085 11.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4432) ALIX_LYPXL_bnd PF13949.6 ORF144248 - 0.038 13.3 0.7 0.045 13.0 0.7 1.1 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV CRAL_TRIO PF00650.20 ORF142906 - 4.9e-11 42.6 0.0 7.8e-11 42.0 0.0 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain PDZ PF00595.24 ORF142479 - 3.2e-07 30.6 0.5 0.008 16.5 0.1 2.6 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF142479 - 0.001 19.3 0.1 1.4 9.3 0.0 2.3 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF142479 - 0.0059 16.4 0.2 0.31 10.9 0.1 2.4 2 0 0 2 2 2 1 PDZ domain CitMHS PF03600.16 ORF140831 - 7.2e-09 35.3 0.7 2e-08 33.8 0.0 1.9 1 1 1 2 2 2 2 Citrate transporter FAR1 PF03101.15 ORF138804 - 0.11 13.2 1.3 0.2 12.3 0.1 1.9 2 0 0 2 2 2 0 FAR1 DNA-binding domain TPALS PF18178.1 ORF138766 - 0.0042 16.5 0.0 0.0051 16.3 0.0 1.2 1 0 0 1 1 1 1 TIR- and PNP-associating SLOG family STALD PF18185.1 ORF138766 - 0.0048 16.3 0.0 0.0072 15.7 0.0 1.2 1 0 0 1 1 1 1 Sir2- and TIR-associating SLOG family LDcluster4 PF18306.1 ORF138766 - 0.15 11.7 0.0 0.32 10.6 0.0 1.6 2 0 0 2 2 2 0 SLOG cluster4 family SARAF PF06682.12 ORF138646 - 0.0033 17.1 0.0 0.0041 16.8 0.0 1.1 1 0 0 1 1 1 1 SOCE-associated regulatory factor of calcium homoeostasis Shisa PF13908.6 ORF138646 - 0.0044 17.3 0.0 0.0057 16.9 0.0 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Adeno_E3_CR2 PF02439.15 ORF138646 - 5.1 6.9 12.2 8.7 6.2 12.2 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 CitMHS PF03600.16 ORF137344 - 7.2e-09 35.3 0.7 2e-08 33.8 0.0 1.9 1 1 1 2 2 2 2 Citrate transporter DUF4131 PF13567.6 ORF134040 - 0.029 14.0 1.5 0.039 13.6 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Scytalone_dh PF02982.14 ORF134040 - 0.094 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Scytalone dehydratase MobB PF03205.14 ORF128514 - 1.3e-49 167.5 0.0 1.5e-49 167.3 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 ORF128514 - 0.016 14.8 0.0 0.028 14.0 0.0 1.8 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF128514 - 0.087 13.1 0.1 0.14 12.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain CbiA PF01656.23 ORF128514 - 0.21 11.6 0.2 0.44 10.6 0.1 1.8 1 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain Orthopox_A5L PF06193.11 ORF124280 - 0.27 10.6 7.5 0.31 10.5 7.5 1.2 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like Fer4_6 PF12837.7 ORF122650 - 6.4e-14 51.3 40.2 4.8e-07 29.6 2.6 4.6 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.27 ORF122650 - 5.3e-13 48.2 42.8 6.6e-08 32.1 3.2 5.9 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_9 PF13187.6 ORF122650 - 1.3e-11 44.4 51.9 2.9e-06 27.3 10.1 3.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF122650 - 6.4e-11 42.7 35.7 5.7e-07 30.0 12.1 3.0 2 2 2 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF122650 - 2.1e-10 40.0 37.3 3e-05 23.9 2.3 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_11 PF13247.6 ORF122650 - 4.9e-10 39.4 23.6 4.5e-08 33.1 6.8 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF122650 - 6e-09 35.9 36.1 3.7e-06 27.0 11.4 3.9 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF122650 - 1.6e-07 32.1 30.5 0.0052 17.7 4.2 4.6 3 1 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 ORF122650 - 8.7e-07 29.5 46.1 0.0056 17.5 6.2 4.5 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_4 PF12800.7 ORF122650 - 2.1e-05 24.7 41.6 8.5e-05 22.8 4.2 5.2 4 2 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 ORF122650 - 2.4e-05 24.4 35.8 0.0017 18.4 12.5 3.7 1 1 3 4 4 4 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF122650 - 0.00024 21.5 34.0 0.055 13.9 11.2 3.3 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF122650 - 0.024 15.2 2.1 0.024 15.2 2.1 4.4 1 1 5 6 6 6 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 ORF122650 - 0.88 9.4 37.1 0.55 10.0 3.6 4.1 1 1 3 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ETF_QO PF05187.13 ORF122650 - 1.6 8.9 15.3 7.3 6.8 6.4 2.8 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_15 PF13459.6 ORF122650 - 2 9.2 26.6 0.75 10.6 9.1 3.2 2 2 0 2 2 2 0 4Fe-4S single cluster domain YL1 PF05764.13 ORF121674 - 0.042 14.0 22.8 0.051 13.7 22.8 1.2 1 0 0 1 1 1 0 YL1 nuclear protein Sugar_tr PF00083.24 ORF116758 - 1.4e-06 27.4 0.3 1.7e-06 27.2 0.3 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter DAGK_cat PF00781.24 ORF115952 - 0.051 13.2 0.0 0.085 12.5 0.0 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain WDCP PF15390.6 ORF115952 - 0.086 11.2 0.0 0.1 11.0 0.0 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family NAF PF03822.14 ORF114733 - 0.15 12.3 3.6 9 6.6 0.3 2.7 1 1 2 3 3 3 0 NAF domain zf-RING_11 PF17123.5 ORF112947 - 0.78 9.5 3.0 0.37 10.6 0.4 1.9 2 0 0 2 2 2 0 RING-like zinc finger DMRL_synthase PF00885.19 ORF112537 - 2.1e-55 186.4 0.8 2.5e-55 186.2 0.8 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DAP10 PF07213.11 ORF112228 - 0.11 12.5 0.2 0.23 11.5 0.2 1.5 1 0 0 1 1 1 0 DAP10 membrane protein CSD PF00313.22 ORF110053 - 9.7e-06 25.4 0.0 1.8e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF110053 - 0.089 12.5 0.2 0.089 12.5 0.2 1.8 2 0 0 2 2 2 0 Ribonuclease B OB domain dsRBD2 PF17842.1 ORF10979 - 4.6 7.4 8.8 12 6.1 7.9 2.0 1 1 0 1 1 1 0 Double-stranded RNA binding domain 2 RAMP4 PF06624.12 ORF109687 - 0.74 9.9 4.2 13 6.0 0.1 2.7 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 ATP-synt_B PF00430.18 ORF109175 - 1.1e-10 41.7 18.5 2.9e-10 40.3 18.5 1.6 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) V-ATPase_G PF03179.15 ORF109175 - 0.0068 16.9 16.6 0.0094 16.5 16.6 1.2 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit KMP11 PF03037.16 ORF109175 - 0.016 16.0 4.3 0.64 10.8 1.7 2.1 1 1 1 2 2 2 0 Kinetoplastid membrane protein 11 Apolipoprotein PF01442.18 ORF109175 - 0.055 13.3 17.8 10 5.9 1.5 1.9 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Neur_chan_memb PF02932.16 ORF109175 - 0.08 13.0 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3584 PF12128.8 ORF109175 - 0.084 10.4 11.5 0.1 10.1 11.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Phage_GPO PF05929.11 ORF109175 - 0.15 11.6 11.8 0.2 11.2 11.8 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF2228 PF10228.9 ORF109175 - 0.18 11.5 5.9 0.25 11.0 3.4 1.9 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2228) DUF885 PF05960.11 ORF109175 - 0.18 11.4 9.2 0.22 11.1 9.2 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) Phage_TAC_4 PF08748.11 ORF109175 - 0.28 11.5 6.9 0.44 10.9 6.9 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone CDC73_N PF16050.5 ORF109175 - 0.51 9.6 10.5 0.62 9.3 10.5 1.1 1 0 0 1 1 1 0 Paf1 complex subunit CDC73 N-terminal Presenilin PF01080.17 ORF109175 - 0.63 8.7 5.0 0.8 8.4 5.0 1.2 1 0 0 1 1 1 0 Presenilin PIN_8 PF18476.1 ORF109175 - 0.74 9.6 6.1 1 9.2 6.1 1.2 1 0 0 1 1 1 0 PIN like domain TP53IP5 PF15331.6 ORF109175 - 0.81 9.8 4.3 1 9.5 4.3 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 Nup88 PF10168.9 ORF109175 - 1 7.1 8.2 1.3 6.7 8.2 1.0 1 0 0 1 1 1 0 Nuclear pore component EC042_2821 PF18740.1 ORF109175 - 1.1 9.1 4.3 1.4 8.8 4.3 1.2 1 0 0 1 1 1 0 EC042_2821-lke REase YtxH PF12732.7 ORF109175 - 1.1 9.8 14.6 2.4 8.8 10.3 2.5 1 1 1 2 2 2 0 YtxH-like protein OTU PF02338.19 ORF109175 - 1.4 9.4 3.8 4 7.9 0.3 2.1 1 1 1 2 2 2 0 OTU-like cysteine protease DUF883 PF05957.13 ORF109175 - 1.5 9.4 14.7 2.3 8.9 9.1 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF2229 PF09989.9 ORF109175 - 1.7 8.2 4.4 2.3 7.8 4.4 1.2 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) TMPIT PF07851.13 ORF109175 - 1.9 7.7 6.7 2.4 7.3 6.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Atg14 PF10186.9 ORF109175 - 2.3 7.2 6.8 3 6.8 6.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1682 PF07946.14 ORF109175 - 3.9 6.6 12.7 4.6 6.4 12.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) DUF3138 PF11336.8 ORF109175 - 8.2 4.9 8.8 9.5 4.7 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) zf-C2H2 PF00096.26 ORF106288 - 3.2e-10 39.9 19.6 0.0037 17.6 0.6 3.7 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF106288 - 2.1e-06 28.1 23.0 0.0034 18.1 0.5 3.7 4 0 0 4 4 4 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF106288 - 2.1e-05 24.7 6.0 0.0021 18.4 1.5 3.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2HE PF16278.5 ORF106288 - 0.0056 17.1 0.4 0.0056 17.1 0.4 2.4 1 1 0 2 2 2 1 C2HE / C2H2 / C2HC zinc-binding finger FOXP-CC PF16159.5 ORF106288 - 0.014 16.0 2.6 0.036 14.7 0.1 2.5 3 0 0 3 3 3 0 FOXP coiled-coil domain GAGA PF09237.11 ORF106288 - 0.039 13.8 1.6 0.24 11.2 0.1 2.6 3 0 0 3 3 3 0 GAGA factor zf-C2H2_3rep PF18868.1 ORF106288 - 0.047 14.4 0.2 0.047 14.4 0.2 2.2 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats RE_BsaWI PF18643.1 ORF106288 - 0.081 12.8 0.1 0.16 11.9 0.1 1.5 1 1 0 1 1 1 0 BsaWI restriction endonuclease type 2 zf-C2H2_8 PF15909.5 ORF106288 - 1.6 9.0 10.7 3.9 7.8 1.1 2.2 1 1 1 2 2 2 0 C2H2-type zinc ribbon Acetyltransf_13 PF13880.6 ORF10503 - 0.064 13.2 0.4 7.4 6.6 0.2 2.4 1 1 1 2 2 2 0 ESCO1/2 acetyl-transferase p450 PF00067.22 ORF102601 - 1.7e-29 102.9 0.0 1.9e-29 102.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Apolipoprotein PF01442.18 ORF101681 - 2.4e-05 24.3 13.7 0.0005 20.0 13.6 2.1 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF1640 PF07798.11 ORF101681 - 0.0014 18.7 1.3 0.0019 18.3 1.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) DUF3584 PF12128.8 ORF101681 - 0.0033 15.1 5.6 0.004 14.8 5.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Exonuc_VII_L PF02601.15 ORF101681 - 0.01 15.5 1.0 0.011 15.3 1.0 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit ZYG-11_interact PF05884.12 ORF101681 - 0.022 14.2 1.9 0.032 13.7 1.9 1.2 1 0 0 1 1 1 0 Interactor of ZYG-11 Neur_chan_memb PF02932.16 ORF101681 - 0.049 13.7 0.3 0.07 13.2 0.3 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Tir_receptor_M PF03549.14 ORF101681 - 0.084 13.2 0.2 0.15 12.5 0.2 1.4 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) intimin-binding domain OmpH PF03938.14 ORF101681 - 0.24 11.7 9.4 0.4 11.0 9.4 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) POTRA_TamA_1 PF17243.2 ORF101681 - 0.67 10.1 4.0 4 7.6 1.4 2.2 1 1 1 2 2 2 0 POTRA domain TamA domain 1 DUF948 PF06103.11 ORF101681 - 0.79 10.0 6.5 7.6 6.9 0.0 3.3 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF2937 PF11157.8 ORF101681 - 0.92 9.2 5.7 0.7 9.6 3.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2937) GTA_holin_3TM PF11351.8 ORF101681 - 5.3 7.6 10.0 11 6.5 1.9 2.6 1 1 1 2 2 2 0 Holin of 3TMs, for gene-transfer release CHD5 PF04420.14 ORF101681 - 6.4 6.6 8.7 1.9 8.3 1.3 2.8 2 1 1 3 3 3 0 CHD5-like protein CLZ PF16526.5 ORF101681 - 9.1 6.7 8.7 1.7 9.0 4.4 2.1 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Carla_C4 PF01623.17 ORF100762 - 1.5 8.8 12.3 0.75 9.8 0.3 2.7 2 2 1 3 3 3 0 Carlavirus putative nucleic acid binding protein DUF4618 PF15397.6 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.0024 17.4 7.2 0.0024 17.4 7.2 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4618) ADIP PF11559.8 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.034 14.2 19.1 0.41 10.7 0.7 2.8 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Tup_N PF08581.10 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.072 13.4 18.1 0.085 13.2 7.1 2.4 1 1 1 2 2 2 0 Tup N-terminal FN3_7 PF18447.1 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.16 12.3 3.9 0.18 12.1 0.5 2.0 1 1 1 2 2 2 0 Fibronectin type III domain SieB PF14163.6 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.2 11.1 1.0 0.37 10.3 1.0 1.5 1 0 0 1 1 1 0 Super-infection exclusion protein B ZapB PF06005.12 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.24 11.9 19.5 2.7 8.5 6.0 3.6 1 1 2 3 3 3 0 Cell division protein ZapB KASH_CCD PF14662.6 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.24 11.2 16.2 0.58 10.0 0.8 2.1 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF4407 PF14362.6 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.3 10.4 12.6 0.64 9.3 12.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Macoilin PF09726.9 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.39 9.2 14.8 0.45 9.0 14.8 1.0 1 0 0 1 1 1 0 Macoilin family TMF_DNA_bd PF12329.8 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.44 10.6 17.1 0.3 11.1 6.8 2.5 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF724 PF05266.14 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.47 10.2 14.4 0.29 10.9 6.7 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF724) Rx_N PF18052.1 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.51 10.6 5.4 14 6.0 3.0 2.3 2 1 0 2 2 2 0 Rx N-terminal domain FliT PF05400.13 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 0.6 11.0 8.4 0.94 10.3 5.0 2.7 1 1 1 2 2 2 0 Flagellar protein FliT CENP-H PF05837.12 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 1.5 9.2 13.1 2.5e+02 2.1 13.1 2.3 1 1 0 1 1 1 0 Centromere protein H (CENP-H) APG6_N PF17675.1 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 1.7 9.2 19.1 0.34 11.4 7.4 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Atg14 PF10186.9 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 1.8 7.6 16.4 3 6.8 16.4 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FAM76 PF16046.5 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 1.8 7.9 11.5 2.3 7.5 11.5 1.3 1 0 0 1 1 1 0 FAM76 protein UPF0242 PF06785.11 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 1.8 8.6 19.6 7.2 6.7 19.5 1.8 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2570 PF10828.8 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 2.4 8.0 10.7 0.65 9.8 3.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) DUF1664 PF07889.12 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 2.5 8.2 6.7 2.1 8.4 3.8 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) AAA_lid_9 PF17871.1 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 3.5 7.6 10.2 5.4 7.0 2.3 2.8 1 1 2 3 3 3 0 AAA lid domain FliD_N PF02465.18 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 5.9 7.7 8.6 2.4 8.9 2.5 2.5 1 1 2 3 3 3 0 Flagellar hook-associated protein 2 N-terminus TMPIT PF07851.13 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 7.9 5.6 12.7 73 2.4 12.7 2.1 1 1 0 1 1 1 0 TMPIT-like protein Jnk-SapK_ap_N PF09744.9 NODE_40018_length_520_cov_2.191753_g32567_i0forward_frame_1 - 8.2 6.6 18.1 46 4.2 18.1 1.9 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 CoA_binding_3 PF13727.6 NODE_40017_length_520_cov_2.653608_g32566_i0reverse_frame_1 - 0.76 9.8 7.9 0.19 11.8 3.0 1.9 2 0 0 2 2 2 0 CoA-binding domain Pentapeptide_4 PF13599.6 NODE_40014_length_520_cov_3.123711_g32563_i0forward_frame_1 - 0.16 12.1 5.1 0.67 10.2 4.0 2.1 1 1 1 2 2 2 0 Pentapeptide repeats (9 copies) DUF679 PF05078.12 NODE_39996_length_520_cov_73.519588_g32547_i0reverse_frame_1 - 0.023 14.7 0.1 0.03 14.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF679) DUF5463 PF17551.2 NODE_39973_length_520_cov_336.725773_g32524_i0forward_frame_1 - 0.019 14.8 1.5 0.019 14.8 1.5 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5463) DUF1350 PF07082.11 NODE_39973_length_520_cov_336.725773_g32524_i0forward_frame_1 - 0.054 12.8 0.1 0.098 11.9 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1350) NinD PF17466.2 NODE_39967_length_520_cov_4067.061856_g32519_i0reverse_frame_1 - 0.015 15.3 0.9 0.034 14.2 0.2 2.0 2 0 0 2 2 2 0 Family of unknown function GWT1 PF06423.12 NODE_39967_length_520_cov_4067.061856_g32519_i0forward_frame_1 - 0.13 12.4 0.2 0.14 12.2 0.2 1.2 1 0 0 1 1 1 0 GWT1 DUF3450 PF11932.8 NODE_39962_length_521_cov_2.588477_g32517_i0reverse_frame_1 - 0.0011 18.3 4.5 0.0015 17.9 4.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) DUF5352 PF17303.2 NODE_39962_length_521_cov_2.588477_g32517_i0reverse_frame_1 - 0.15 11.9 3.7 0.11 12.4 1.8 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5352) DUF3573 PF12097.8 NODE_39962_length_521_cov_2.588477_g32517_i0reverse_frame_1 - 0.18 10.6 3.6 0.22 10.3 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DivIC PF04977.15 NODE_39962_length_521_cov_2.588477_g32517_i0reverse_frame_1 - 1.7 8.5 7.9 32 4.4 8.0 2.4 1 1 0 1 1 1 0 Septum formation initiator Methyltransf_16 PF10294.9 NODE_39920_length_521_cov_240.946502_g32479_i0forward_frame_1 - 3.7e-08 33.3 0.0 5e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase ubiquitin PF00240.23 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 3.4e-14 52.4 0.0 5.6e-14 51.6 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family zf-A20 PF01754.16 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 3.6e-09 36.4 10.4 3.6e-09 36.4 10.4 1.6 2 0 0 2 2 2 1 A20-like zinc finger Rad60-SLD PF11976.8 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 0.0028 17.4 0.0 0.0059 16.4 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 0.0035 17.9 0.2 0.0065 17.0 0.2 1.5 1 1 0 1 1 1 1 DUF2407 ubiquitin-like domain Ubiquitin_2 PF14560.6 NODE_39917_length_521_cov_314.942387_g32476_i0reverse_frame_1 - 0.0098 16.3 0.0 0.024 15.1 0.0 1.6 2 0 0 2 2 2 1 Ubiquitin-like domain DUF3811 PF11656.8 NODE_39903_length_522_cov_2.722793_g32466_i0reverse_frame_1 - 0.033 14.6 0.5 0.065 13.6 0.5 1.4 1 0 0 1 1 1 0 YjbD family (DUF3811) Dynamitin PF04912.14 NODE_39903_length_522_cov_2.722793_g32466_i0reverse_frame_1 - 0.033 13.5 5.1 0.041 13.2 5.1 1.1 1 0 0 1 1 1 0 Dynamitin Ank_2 PF12796.7 NODE_39894_length_522_cov_72.882957_g32457_i0reverse_frame_1 - 6.6e-25 87.5 1.7 3.9e-11 43.4 0.1 2.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_39894_length_522_cov_72.882957_g32457_i0reverse_frame_1 - 1.8e-11 43.2 1.5 0.11 13.2 0.1 5.0 5 0 0 5 5 5 3 Ankyrin repeat Ank PF00023.30 NODE_39894_length_522_cov_72.882957_g32457_i0reverse_frame_1 - 2.2e-09 37.3 6.1 0.015 15.7 0.0 4.8 3 1 2 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 NODE_39894_length_522_cov_72.882957_g32457_i0reverse_frame_1 - 6.9e-07 29.4 4.1 0.28 11.6 0.1 4.8 1 1 4 5 5 5 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_39894_length_522_cov_72.882957_g32457_i0reverse_frame_1 - 3.5e-06 27.4 0.9 0.032 14.8 0.0 3.5 1 1 3 4 4 4 4 Ankyrin repeats (many copies) SPT_ssu-like PF11779.8 NODE_39889_length_522_cov_86.677618_g32453_i0reverse_frame_1 - 0.044 13.4 2.2 0.047 13.3 1.1 1.6 2 0 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like Kelch_4 PF13418.6 NODE_39883_length_522_cov_95.973306_g32448_i0reverse_frame_1 - 4.3e-20 71.5 0.9 7.4e-08 32.3 0.0 3.8 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_39883_length_522_cov_95.973306_g32448_i0reverse_frame_1 - 1.4e-18 66.7 0.4 1.1e-05 25.6 0.0 3.2 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_39883_length_522_cov_95.973306_g32448_i0reverse_frame_1 - 6.3e-17 60.9 0.0 6.3e-07 28.9 0.0 3.0 3 0 0 3 3 3 2 Kelch motif Kelch_5 PF13854.6 NODE_39883_length_522_cov_95.973306_g32448_i0reverse_frame_1 - 6.5e-17 61.1 0.0 5.2e-07 29.5 0.0 3.2 3 0 0 3 3 3 3 Kelch motif Kelch_2 PF07646.15 NODE_39883_length_522_cov_95.973306_g32448_i0reverse_frame_1 - 7.5e-14 51.1 0.2 4.4e-05 23.3 0.0 3.4 4 0 0 4 4 4 2 Kelch motif Kelch_6 PF13964.6 NODE_39883_length_522_cov_95.973306_g32448_i0reverse_frame_1 - 4.5e-12 45.8 0.2 0.00088 19.5 0.0 3.7 3 1 1 4 4 4 2 Kelch motif Cys_rich_VLP PF14194.6 NODE_39882_length_522_cov_97.207392_g32447_i0forward_frame_1 - 0.43 10.8 2.8 4.2 7.6 0.8 2.6 2 0 0 2 2 2 0 Cysteine-rich VLP RCC1_2 PF13540.6 NODE_39880_length_522_cov_99.425051_g32445_i0forward_frame_1 - 0.00059 19.6 1.8 0.54 10.1 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat ERGIC_N PF13850.6 NODE_39870_length_522_cov_148.141684_g32435_i0reverse_frame_1 - 0.029 14.7 0.3 0.057 13.8 0.1 1.6 2 1 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) AI-2E_transport PF01594.16 NODE_39870_length_522_cov_148.141684_g32435_i0reverse_frame_1 - 0.098 11.8 0.2 0.12 11.5 0.2 1.1 1 0 0 1 1 1 0 AI-2E family transporter Na_H_Exchanger PF00999.21 NODE_39853_length_523_cov_1.956967_g32421_i0reverse_frame_3 - 2.8e-12 46.2 13.8 3.7e-12 45.7 13.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family EGF_2 PF07974.13 NODE_39853_length_523_cov_1.956967_g32421_i0reverse_frame_3 - 0.016 15.6 3.3 0.03 14.7 3.3 1.4 1 0 0 1 1 1 0 EGF-like domain FixQ PF05545.11 NODE_39853_length_523_cov_1.956967_g32421_i0reverse_frame_3 - 0.052 13.5 1.0 0.052 13.5 1.0 2.4 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ Tetraspanin PF00335.20 NODE_39853_length_523_cov_1.956967_g32421_i0reverse_frame_3 - 1.8 8.2 8.5 3.3 7.3 0.2 2.1 2 0 0 2 2 2 0 Tetraspanin family ThrE PF06738.12 NODE_39853_length_523_cov_1.956967_g32421_i0reverse_frame_3 - 8.1 5.7 11.6 0.12 11.7 1.6 2.0 1 1 1 2 2 2 0 Putative threonine/serine exporter DUF4239 PF14023.6 NODE_39849_length_523_cov_2.625000_g20520_i1reverse_frame_3 - 0.042 13.6 0.5 0.057 13.1 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4239) VP9 PF09625.10 NODE_39849_length_523_cov_2.625000_g20520_i1reverse_frame_2 - 0.031 14.4 0.0 0.071 13.3 0.0 1.6 1 0 0 1 1 1 0 VP9 protein Imm2 PF14426.6 NODE_39844_length_523_cov_3.452869_g32413_i0forward_frame_2 - 0.019 15.0 0.0 0.042 13.9 0.0 1.5 1 0 0 1 1 1 0 Immunity protein Imm2 TetR_C_24 PF17932.1 NODE_39839_length_523_cov_20.469262_g32408_i0reverse_frame_2 - 0.045 14.0 0.0 0.064 13.5 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain FAM217 PF15344.6 NODE_39828_length_523_cov_90.295082_g32397_i0forward_frame_2 - 0.85 9.5 4.3 1.1 9.2 4.3 1.1 1 0 0 1 1 1 0 FAM217 family HA2 PF04408.23 NODE_39824_length_523_cov_101.213115_g32393_i0forward_frame_3 - 0.062 13.6 0.2 0.091 13.1 0.2 1.2 1 0 0 1 1 1 0 Helicase associated domain (HA2) Phosducin PF02114.16 NODE_39818_length_523_cov_127.350410_g32387_i0reverse_frame_3 - 0.021 13.8 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Phosducin Flavin_Reduct PF01613.18 NODE_39818_length_523_cov_127.350410_g32387_i0forward_frame_2 - 0.061 13.4 0.2 0.061 13.4 0.2 1.4 2 0 0 2 2 2 0 Flavin reductase like domain Herpes_UL16 PF03044.14 NODE_39816_length_523_cov_145.301230_g32385_i0forward_frame_3 - 0.83 8.9 7.7 0.056 12.7 2.9 1.5 2 0 0 2 2 2 0 Herpesvirus UL16/UL94 family Cep57_MT_bd PF06657.13 NODE_39807_length_523_cov_237.182377_g32378_i0reverse_frame_3 - 0.015 15.7 3.1 0.015 15.7 3.1 2.0 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Macoilin PF09726.9 NODE_39807_length_523_cov_237.182377_g32378_i0reverse_frame_3 - 2.8 6.4 10.4 3.8 6.0 10.4 1.2 1 0 0 1 1 1 0 Macoilin family OmpH PF03938.14 NODE_39807_length_523_cov_237.182377_g32378_i0reverse_frame_3 - 6.4 7.1 12.3 13 6.1 12.3 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) YMF19 PF02326.15 NODE_39799_length_523_cov_446.122951_g32370_i0reverse_frame_3 - 0.092 13.5 0.1 0.14 12.9 0.1 1.3 1 0 0 1 1 1 0 Plant ATP synthase F0 TrpP PF17099.5 NODE_39793_length_524_cov_1.601227_g32365_i0reverse_frame_2 - 0.017 14.9 0.7 0.021 14.6 0.7 1.1 1 0 0 1 1 1 0 Tryptophan transporter TrpP DUF2164 PF09932.9 NODE_39793_length_524_cov_1.601227_g32365_i0forward_frame_3 - 0.13 12.3 0.1 0.23 11.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) Mucin2_WxxW PF13330.6 NODE_39790_length_524_cov_2.386503_g32362_i0forward_frame_3 - 0.067 14.0 3.2 0.11 13.3 1.6 2.0 1 1 1 2 2 2 0 Mucin-2 protein WxxW repeating region TrwC PF08751.11 NODE_39790_length_524_cov_2.386503_g32362_i0forward_frame_3 - 0.12 11.9 4.2 0.15 11.5 4.2 1.1 1 0 0 1 1 1 0 TrwC relaxase DUF2214 PF09980.9 NODE_39788_length_524_cov_2.578732_g32360_i0reverse_frame_2 - 0.011 15.6 0.1 0.016 15.0 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2214) DUF3342 PF11822.8 NODE_39779_length_524_cov_3.022495_g32351_i0forward_frame_3 - 3.6e-07 30.3 0.0 7e-07 29.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) RNA_GG_bind PF10258.9 NODE_39778_length_524_cov_3.065440_g32350_i0forward_frame_2 - 1.3e-08 34.7 0.1 2.1e-08 34.1 0.1 1.3 1 0 0 1 1 1 1 PHAX RNA-binding domain zf-C3HC4_3 PF13920.6 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 3.2e-10 39.7 8.5 6.5e-10 38.7 8.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 9.1e-09 35.5 11.6 2e-08 34.4 11.6 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 2.6e-08 33.6 11.9 5.7e-08 32.5 11.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 4.2e-07 29.7 10.4 8e-07 28.8 10.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 4.6e-07 29.6 8.9 9.3e-07 28.6 8.9 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 4.8e-07 30.0 8.3 9.5e-07 29.0 8.3 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 2.2e-05 24.4 8.4 3.3e-05 23.8 7.5 1.8 2 0 0 2 2 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 0.00033 20.5 9.7 0.0013 18.6 9.8 2.0 1 1 1 2 2 2 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 0.0031 17.5 1.5 0.0058 16.7 1.5 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 0.0037 17.4 9.3 0.0098 16.0 9.3 1.8 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_10 PF16685.5 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 0.019 15.1 4.2 0.044 13.9 4.2 1.6 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf_PR_Knuckle PF18445.1 NODE_39775_length_524_cov_7.327198_g32347_i0reverse_frame_3 - 0.35 10.7 5.1 4.8 7.1 0.0 3.2 3 0 0 3 3 3 0 PR zinc knuckle motif DUF2895 PF11444.8 NODE_39774_length_524_cov_12.288344_g32346_i0reverse_frame_3 - 0.004 16.6 0.2 0.005 16.2 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2895) DUF1616 PF07760.11 NODE_39774_length_524_cov_12.288344_g32346_i0reverse_frame_2 - 0.1 12.0 0.6 0.16 11.3 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) DUF2070 PF09843.9 NODE_39765_length_524_cov_86.153374_g29217_i1reverse_frame_3 - 1.9 6.7 9.9 2.3 6.4 9.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks140.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks140.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks140.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks140.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PI3K_C2 PF00792.24 NODE_39756_length_524_cov_101.408998_g32329_i0forward_frame_3 - 0.015 15.2 0.0 0.042 13.8 0.0 1.6 1 1 1 2 2 2 0 Phosphoinositide 3-kinase C2 DMRL_synthase PF00885.19 NODE_39755_length_524_cov_103.032720_g32328_i0forward_frame_2 - 0.093 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 6,7-dimethyl-8-ribityllumazine synthase Phostensin PF13914.6 NODE_39755_length_524_cov_103.032720_g32328_i0forward_frame_2 - 0.14 12.7 0.0 0.18 12.5 0.0 1.2 1 0 0 1 1 1 0 Phostensin PP1-binding and SH3-binding region TMEM119 PF15724.5 NODE_39745_length_524_cov_154.586912_g32318_i0reverse_frame_2 - 8.5 6.4 14.1 12 5.9 14.1 1.2 1 0 0 1 1 1 0 TMEM119 family PK PF00224.21 NODE_39721_length_525_cov_3.332653_g32298_i0forward_frame_2 - 2.7e-67 227.1 2.3 3.2e-67 226.9 2.3 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain HpcH_HpaI PF03328.14 NODE_39721_length_525_cov_3.332653_g32298_i0forward_frame_2 - 0.00037 19.7 0.7 0.0019 17.4 0.6 2.0 1 1 1 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family Glyco_hydro_3_C PF01915.22 NODE_39721_length_525_cov_3.332653_g32298_i0forward_frame_2 - 0.012 15.6 0.2 0.016 15.1 0.2 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain TFIIB_C_1 PF18542.1 NODE_39721_length_525_cov_3.332653_g32298_i0forward_frame_2 - 0.077 13.0 0.1 0.22 11.6 0.0 1.8 1 1 0 1 1 1 0 Transcription factor IIB C-terminal module 1 DUF5320 PF17253.2 NODE_39713_length_525_cov_69.387755_g32290_i0forward_frame_2 - 0.25 12.4 5.9 0.19 12.8 4.3 1.6 1 1 1 2 2 2 0 Family of unknown function (DUF5320) ALIX_LYPXL_bnd PF13949.6 NODE_39707_length_525_cov_92.322449_g32284_i0reverse_frame_3 - 7.4e-05 22.2 0.6 7.7e-05 22.1 0.1 1.4 2 0 0 2 2 2 1 ALIX V-shaped domain binding to HIV MORN PF02493.20 NODE_39705_length_525_cov_101.436735_g32282_i0reverse_frame_3 - 1.8e-16 58.9 31.0 0.00063 19.5 0.4 6.6 6 0 0 6 6 6 5 MORN repeat DUF3048_C PF17479.2 NODE_39705_length_525_cov_101.436735_g32282_i0reverse_frame_3 - 0.0082 16.5 6.6 1.5 9.2 1.9 2.9 1 1 0 2 2 2 2 Protein of unknown function (DUF3048) C-terminal domain Thioredoxin_11 PF18078.1 NODE_39705_length_525_cov_101.436735_g32282_i0reverse_frame_3 - 2.9 8.0 6.1 1.7 8.7 0.6 2.6 2 1 1 3 3 3 0 Thioredoxin-like SNTX domain DSPc PF00782.20 NODE_39701_length_525_cov_141.210204_g32278_i0reverse_frame_2 - 9.1e-25 87.0 0.0 1.1e-24 86.7 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_39701_length_525_cov_141.210204_g32278_i0reverse_frame_2 - 0.00093 18.8 0.0 0.0013 18.4 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase SBF2 PF12335.8 NODE_39701_length_525_cov_141.210204_g32278_i0reverse_frame_2 - 0.033 13.8 0.0 0.039 13.6 0.0 1.1 1 0 0 1 1 1 0 Myotubularin protein Ribosomal_L31e PF01198.19 NODE_39693_length_525_cov_210.448980_g32271_i0reverse_frame_3 - 1.6e-38 130.8 2.8 2.2e-38 130.3 2.8 1.2 1 0 0 1 1 1 1 Ribosomal protein L31e Stomagen PF16851.5 NODE_39693_length_525_cov_210.448980_g32271_i0reverse_frame_2 - 0.062 13.3 0.6 0.14 12.2 0.6 1.6 1 0 0 1 1 1 0 Stomagen CDKN3 PF05706.12 ORF98530 - 0.064 12.9 0.0 0.089 12.5 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) SCRL PF06876.12 ORF97880 - 0.032 14.4 5.6 0.061 13.5 5.6 1.4 1 0 0 1 1 1 0 Plant self-incompatibility response (SCRL) protein SOTI PF17079.5 ORF95808 - 0.036 14.5 1.9 0.089 13.2 0.1 2.1 1 1 1 2 2 2 0 Male-specific protein scotti Carboxyl_trans PF01039.22 ORF9496 - 0.15 10.6 0.0 0.21 10.2 0.0 1.2 1 0 0 1 1 1 0 Carboxyl transferase domain NDUFA12 PF05071.16 ORF9379 - 1.9e-15 57.5 9.0 4e-15 56.4 9.0 1.6 1 1 0 1 1 1 1 NADH ubiquinone oxidoreductase subunit NDUFA12 DUF913 PF06025.12 ORF90465 - 0.42 9.5 3.6 0.44 9.5 3.6 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) PPL5 PF18168.1 ORF90465 - 1.3 8.2 8.8 1.7 7.9 8.8 1.1 1 0 0 1 1 1 0 Prim-pol family 5 Cyclin_N PF00134.23 ORF89851 - 0.0046 16.7 0.5 0.0071 16.1 0.5 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain YecR PF13992.6 ORF87353 - 7.4 6.9 9.8 5.6 7.3 7.7 1.8 1 1 1 2 2 2 0 YecR-like lipoprotein Transpos_assoc PF13963.6 ORF85803 - 4.3 7.7 7.4 3.3 8.1 1.5 2.3 1 1 1 2 2 2 0 Transposase-associated domain PRIMA1 PF16101.5 ORF85180 - 0.0012 18.9 1.0 0.0023 17.9 1.0 1.5 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 BSD PF03909.17 ORF84850 - 0.097 12.7 0.1 0.28 11.2 0.0 1.7 2 0 0 2 2 2 0 BSD domain Ldh_2 PF02615.14 ORF84211 - 3.2e-59 200.7 4.1 3.5e-59 200.6 4.1 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase DUF1778 PF08681.11 ORF83934 - 0.059 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1778) His_Phos_1 PF00300.22 ORF83905 - 2.6e-28 99.1 0.0 3.1e-28 98.8 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Sas10_Utp3 PF04000.15 ORF83132 - 4.4e-06 27.2 2.7 5.3e-06 27.0 0.1 2.1 2 0 0 2 2 2 1 Sas10/Utp3/C1D family TolA_bind_tri PF16331.5 ORF83132 - 0.08 13.0 0.6 0.7 10.0 0.0 2.3 2 0 0 2 2 2 0 TolA binding protein trimerisation TFIID-31kDa PF02291.15 ORF82128 - 0.023 14.8 1.0 0.033 14.3 1.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit YdjM PF04307.14 ORF81940 - 0.21 10.9 3.2 0.25 10.6 3.1 1.5 1 1 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Ctr PF04145.15 ORF80392 - 2.7e-09 37.8 11.9 3.4e-05 24.5 8.6 2.1 1 1 1 2 2 2 2 Ctr copper transporter family DUF4083 PF13314.6 ORF80392 - 0.00097 19.0 1.0 0.0039 17.1 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4083) DUF4229 PF14012.6 ORF80392 - 0.081 13.0 4.1 3.9 7.6 2.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) RseC_MucC PF04246.12 ORF80392 - 0.48 10.4 6.8 0.22 11.5 3.4 1.9 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF3487 PF11990.8 ORF80392 - 0.74 9.7 3.3 0.44 10.4 1.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3487) Phage_holin_3_6 PF07332.11 ORF80392 - 1.5 8.9 7.6 2.5 8.2 6.7 1.7 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III PIRT PF15099.6 ORF80231 - 0.22 11.1 0.8 0.44 10.1 0.8 1.5 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Topoisom_bac PF01131.20 ORF7910 - 5.5e-24 84.9 0.0 6.5e-24 84.7 0.0 1.0 1 0 0 1 1 1 1 DNA topoisomerase DUF4050 PF13259.6 ORF78477 - 0.66 10.3 6.8 1 9.6 6.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) SCRL PF06876.12 ORF77959 - 0.032 14.4 5.6 0.061 13.5 5.6 1.4 1 0 0 1 1 1 0 Plant self-incompatibility response (SCRL) protein PCNA_N PF00705.18 ORF76063 - 3.4e-46 156.1 0.9 5.1e-46 155.5 0.5 1.4 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF76063 - 4.3e-07 29.6 0.1 5.6e-07 29.3 0.1 1.1 1 0 0 1 1 1 1 Rad9 PCNA_C PF02747.15 ORF76063 - 0.00014 22.0 0.8 0.068 13.3 0.0 2.8 2 1 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain Hus1 PF04005.12 ORF76063 - 0.044 12.9 0.1 0.049 12.7 0.1 1.2 1 0 0 1 1 1 0 Hus1-like protein Rad1 PF02144.16 ORF76063 - 0.071 12.2 1.9 1.1 8.2 0.6 1.9 1 1 1 2 2 2 0 Repair protein Rad1/Rec1/Rad17 DUF4886 PF16227.5 ORF76063 - 0.077 12.2 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4886) UL45 PF05473.12 ORF74296 - 0.07 12.8 1.2 0.13 11.9 1.1 1.6 1 1 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like Lipin_mid PF16876.5 ORF73945 - 0.11 12.6 1.8 0.25 11.5 0.2 2.4 1 1 1 2 2 2 0 Lipin/Ned1/Smp2 multi-domain protein middle domain Ly49 PF08391.10 ORF73945 - 8.1 6.8 7.4 0.94 9.8 1.4 2.0 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region Atrophin-1 PF03154.15 ORF72754 - 0.013 13.8 0.9 0.014 13.8 0.9 1.0 1 0 0 1 1 1 0 Atrophin-1 family HIN PF02760.15 ORF70671 - 0.076 12.7 2.6 0.1 12.3 2.6 1.3 1 0 0 1 1 1 0 HIN-200/IF120x domain RNA_pol_Rpb4 PF03874.16 ORF70671 - 1.5 9.2 6.4 12 6.3 4.8 2.4 1 1 1 2 2 2 0 RNA polymerase Rpb4 Cyclin_N PF00134.23 ORF69781 - 0.0046 16.7 0.5 0.0071 16.1 0.5 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain zf-RING_10 PF16685.5 ORF68330 - 0.15 12.2 9.8 0.16 12.2 4.3 2.7 2 1 0 2 2 2 0 zinc RING finger of MSL2 Carla_C4 PF01623.17 ORF68247 - 1.2 9.1 12.5 2.5 8.1 12.5 1.5 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein DUF4801 PF16059.5 ORF67848 - 0.1 12.5 0.7 0.19 11.7 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) Atg14 PF10186.9 ORF66978 - 0.0024 17.0 2.4 0.0031 16.7 2.4 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Spore_YpjB PF09577.10 ORF66978 - 0.063 13.1 0.5 0.079 12.8 0.5 1.1 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) BicD PF09730.9 ORF66978 - 0.15 10.4 5.4 0.18 10.2 5.4 1.0 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D ADIP PF11559.8 ORF66978 - 0.31 11.1 5.8 0.48 10.5 5.8 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding Spc7 PF08317.11 ORF66978 - 0.47 9.3 6.6 0.62 8.9 6.6 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein APG6_N PF17675.1 ORF66978 - 0.75 10.3 7.0 1.6 9.3 7.0 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region HXXSHH PF07586.11 ORF66978 - 1.5 8.3 5.4 2.7 7.5 5.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1552) PDZ_6 PF17820.1 ORF62978 - 0.00016 21.5 0.5 0.16 11.8 0.2 2.4 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF62978 - 0.00045 20.5 0.1 0.038 14.3 0.0 2.3 2 0 0 2 2 2 2 PDZ domain Ank_2 PF12796.7 ORF62978 - 0.16 12.6 0.0 0.25 12.0 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) DUF4462 PF14692.6 ORF62645 - 0.022 14.2 0.4 0.41 10.2 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4462) TFIID-31kDa PF02291.15 ORF58242 - 0.023 14.8 1.0 0.033 14.3 1.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Fer2 PF00111.27 ORF58145 - 0.0077 16.2 0.0 0.013 15.5 0.0 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Mesd PF10185.9 ORF58038 - 0.033 14.1 0.6 0.04 13.8 0.6 1.2 1 0 0 1 1 1 0 Chaperone for wingless signalling and trafficking of LDL receptor CHASE8 PF17152.4 ORF58038 - 0.17 12.2 0.0 0.24 11.7 0.0 1.3 1 0 0 1 1 1 0 Periplasmic sensor domain PSI PF01437.25 ORF56824 - 1 9.9 8.1 0.31 11.6 4.7 1.9 2 0 0 2 2 2 0 Plexin repeat Sugar_tr PF00083.24 ORF55814 - 8.2e-24 84.3 16.5 9.1e-24 84.1 16.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter EamA PF00892.20 ORF55814 - 0.0089 16.2 13.9 0.39 10.9 15.1 2.1 1 1 1 2 2 2 1 EamA-like transporter family DUF2206 PF09971.9 ORF55814 - 0.017 13.9 5.3 0.021 13.6 5.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) MFS_1 PF07690.16 ORF55814 - 0.048 12.6 18.5 0.16 10.8 18.5 1.6 1 1 0 1 1 1 0 Major Facilitator Superfamily DUF2070 PF09843.9 ORF55814 - 0.09 11.1 9.0 0.1 10.9 9.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4728 PF15860.5 ORF54718 - 0.0016 19.1 6.3 0.0016 19.1 6.3 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4728) MFS_1 PF07690.16 ORF54185 - 1.7e-12 47.0 14.0 2.3e-12 46.6 14.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Insulin_TMD PF17870.1 ORF53943 - 0.0011 19.0 0.0 0.0022 18.0 0.0 1.4 1 0 0 1 1 1 1 Insulin receptor trans-membrane segment RIFIN PF02009.16 ORF53288 - 2.1 8.2 3.0 2.3 8.1 3.0 1.2 1 0 0 1 1 1 0 Rifin MORN PF02493.20 ORF50923 - 1.1e-27 94.2 47.0 7.1e-07 28.8 0.7 8.0 8 0 0 8 8 8 7 MORN repeat Tudor_2 PF18104.1 ORF50923 - 0.018 14.7 1.7 11 5.8 0.0 3.9 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain TRI5 PF06330.11 ORF5044 - 0.083 11.7 0.0 0.095 11.5 0.0 1.1 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) GST_C_2 PF13410.6 ORF50400 - 9e-14 51.3 0.0 1.4e-13 50.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF50400 - 2.9e-08 33.8 0.0 4e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF50400 - 1.9e-05 24.8 0.0 2.5e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF50400 - 0.04 13.7 0.0 0.076 12.8 0.0 1.5 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Acp26Ab PF05777.12 ORF49660 - 0.16 12.7 0.6 5.9 7.6 0.1 2.4 1 1 1 2 2 2 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) Keratin_assoc PF09775.9 ORF49340 - 0.013 15.1 0.2 0.025 14.2 0.2 1.4 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 NDUFA12 PF05071.16 ORF49137 - 1.9e-15 57.5 9.0 4e-15 56.4 9.0 1.6 1 1 0 1 1 1 1 NADH ubiquinone oxidoreductase subunit NDUFA12 Macoilin PF09726.9 ORF48620 - 0.42 9.1 8.0 0.47 8.9 8.0 1.0 1 0 0 1 1 1 0 Macoilin family DUF4462 PF14692.6 ORF48118 - 0.022 14.2 0.4 0.41 10.2 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4462) NDUFA12 PF05071.16 ORF46889 - 1.9e-15 57.5 9.0 4e-15 56.4 9.0 1.6 1 1 0 1 1 1 1 NADH ubiquinone oxidoreductase subunit NDUFA12 DUF3048_C PF17479.2 ORF46755 - 0.014 15.7 0.1 0.036 14.4 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain Pkinase PF00069.25 ORF46014 - 9.3e-44 149.8 0.0 1.1e-43 149.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46014 - 1.9e-20 73.3 0.0 2.2e-20 73.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF46014 - 0.004 16.2 0.0 0.0043 16.1 0.0 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 ORF46014 - 0.015 14.4 0.1 0.02 14.0 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Kinase-like PF14531.6 ORF46014 - 0.11 11.8 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Kdo PF06293.14 ORF46014 - 0.19 11.0 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Phage_holin_3_6 PF07332.11 ORF44480 - 0.031 14.3 1.8 3.3 7.8 0.0 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III PGA2 PF07543.12 ORF44480 - 0.033 14.2 0.2 0.055 13.5 0.2 1.3 1 0 0 1 1 1 0 Protein trafficking PGA2 DUF4131 PF13567.6 ORF44480 - 9.7 5.8 8.4 0.12 12.1 0.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Aldo_ket_red PF00248.21 ORF44289 - 3.7e-24 85.5 0.0 7.6e-24 84.4 0.0 1.5 1 1 0 1 1 1 1 Aldo/keto reductase family GFRP PF06399.13 ORF44289 - 0.11 12.4 0.1 6 6.8 0.1 2.3 1 1 1 2 2 2 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) CoA_binding_3 PF13727.6 ORF43113 - 2.6 8.0 8.6 4.8 7.2 8.6 1.5 1 0 0 1 1 1 0 CoA-binding domain Aa_trans PF01490.18 ORF4274 - 5e-12 45.3 2.2 5e-12 45.3 2.2 1.5 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein DUF4336 PF14234.6 ORF41989 - 0.0014 17.9 0.2 0.19 10.9 0.0 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF4336) DcpS_C PF11969.8 ORF41729 - 1.9e-20 73.5 2.0 2.9e-20 72.8 2.0 1.3 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding HIT PF01230.23 ORF41729 - 2.5e-11 44.1 1.0 4.2e-11 43.4 1.0 1.3 1 0 0 1 1 1 1 HIT domain PADR1 PF08063.12 ORF40661 - 1.8e-12 46.9 3.2 2.7e-12 46.3 3.2 1.3 1 0 0 1 1 1 1 PADR1 (NUC008) domain Peptidase_S41_N PF11918.8 ORF40661 - 0.016 15.5 0.2 0.037 14.3 0.1 1.6 1 1 0 1 1 1 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP Peptidase_M35 PF02102.15 ORF40661 - 0.7 8.7 8.9 0.86 8.4 8.9 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family Ras PF00071.22 ORF38406 - 7.2e-47 159.0 0.1 8.1e-47 158.8 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF38406 - 6e-24 84.6 0.0 8.5e-24 84.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF38406 - 1e-08 34.9 0.0 1.2e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF38406 - 0.00035 20.6 0.0 0.00049 20.2 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF38406 - 0.0035 17.2 0.0 0.3 11.0 0.0 2.1 2 0 0 2 2 2 1 RsgA GTPase cobW PF02492.19 ORF38406 - 0.015 14.9 0.0 0.081 12.5 0.0 2.0 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF38406 - 0.13 12.5 0.0 0.29 11.4 0.0 1.7 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF38406 - 0.2 12.0 0.0 0.29 11.5 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain DUF1816 PF08846.10 ORF3823 - 0.15 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1816) TMPIT PF07851.13 ORF36663 - 0.11 11.7 0.1 0.16 11.2 0.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein Ras PF00071.22 ORF36626 - 7.7e-47 158.9 0.1 8.7e-47 158.7 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF36626 - 5.9e-24 84.6 0.0 8.5e-24 84.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF36626 - 9.6e-09 34.9 0.0 1.1e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF36626 - 0.00035 20.6 0.0 0.00048 20.2 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF36626 - 0.0029 17.5 0.0 0.23 11.3 0.0 2.1 2 0 0 2 2 2 1 RsgA GTPase cobW PF02492.19 ORF36626 - 0.015 14.9 0.0 0.081 12.5 0.0 2.0 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF36626 - 0.13 12.5 0.0 0.29 11.4 0.0 1.7 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF36626 - 0.2 12.0 0.0 0.29 11.5 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain CDKN3 PF05706.12 ORF34885 - 0.064 12.9 0.0 0.089 12.5 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Aldo_ket_red PF00248.21 ORF31445 - 6.3e-25 88.0 0.0 7.2e-25 87.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family RCC1_2 PF13540.6 ORF30387 - 3.1e-08 33.2 4.7 0.033 14.0 0.0 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Yuri_gagarin PF15934.5 ORF30387 - 0.0022 17.9 0.0 0.027 14.3 0.0 2.0 2 0 0 2 2 2 1 Yuri gagarin DUF155 PF02582.14 ORF30387 - 0.028 14.5 1.5 6.5 6.8 0.4 3.2 2 2 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 zf-C3HC4 PF00097.25 ORF29019 - 0.0011 18.7 18.8 0.0024 17.7 18.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF29019 - 0.0032 17.7 17.0 0.0064 16.8 17.0 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF29019 - 0.0067 16.4 17.9 0.014 15.3 17.9 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF29019 - 0.4 10.7 13.4 0.15 12.1 9.5 2.1 1 1 1 2 2 2 0 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF29019 - 2 8.6 18.7 7.3 6.8 18.7 2.0 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 ORF29019 - 7.1 6.6 18.7 30 4.6 18.7 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) adh_short_C2 PF13561.6 ORF26044 - 1.5e-10 41.0 0.0 5.8e-05 22.8 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF26044 - 4.8e-09 36.0 0.0 0.0012 18.4 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase PsiA PF06952.11 ORF25645 - 0.013 14.8 0.0 0.015 14.6 0.0 1.2 1 0 0 1 1 1 0 PsiA protein Fer4_21 PF14697.6 ORF25645 - 4.8 7.4 9.6 0.15 12.3 0.9 2.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain Myb_DNA-binding PF00249.31 ORF24906 - 0.033 14.4 0.3 0.079 13.2 0.3 1.7 1 0 0 1 1 1 0 Myb-like DNA-binding domain UPF0147 PF03685.13 ORF24847 - 0.0018 18.3 0.0 0.0047 16.9 0.0 1.7 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0147) gerPA PF10676.9 ORF24847 - 0.03 14.6 0.1 11 6.3 0.0 2.4 1 1 1 2 2 2 0 Spore germination protein gerPA/gerPF DUF3456 PF11938.8 ORF24847 - 0.057 13.9 0.0 0.074 13.6 0.0 1.3 1 0 0 1 1 1 0 TLR4 regulator and MIR-interacting MSAP TFIID-31kDa PF02291.15 ORF2416 - 0.023 14.8 1.0 0.033 14.3 1.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Tli4_C PF18426.1 ORF24021 - 0.0028 18.0 0.0 2.5 8.4 0.0 2.1 2 0 0 2 2 2 2 Tle cognate immunity protein 4 C-terminal domain DUF5319 PF17252.2 ORF24021 - 0.054 13.7 0.0 0.098 12.9 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5319) MORN PF02493.20 ORF23272 - 7.6e-14 50.7 18.5 0.00031 20.5 0.1 5.0 4 1 0 4 4 4 3 MORN repeat Creatinase_N PF01321.18 ORF20483 - 0.085 13.5 0.1 0.18 12.5 0.0 1.5 2 0 0 2 2 2 0 Creatinase/Prolidase N-terminal domain TFIID-31kDa PF02291.15 ORF20415 - 0.023 14.8 1.0 0.033 14.3 1.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TFIID-31kDa PF02291.15 ORF1830 - 0.023 14.8 1.0 0.033 14.3 1.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TFIID-31kDa PF02291.15 ORF16540 - 0.023 14.8 1.0 0.033 14.3 1.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit DUF2344 PF10105.9 ORF15741 - 0.012 15.4 1.9 0.017 15.0 1.9 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) DivIVA PF05103.13 ORF15741 - 2.1 8.4 7.5 4.9 7.3 7.5 1.5 1 1 0 1 1 1 0 DivIVA protein MORN PF02493.20 ORF15222 - 6.8e-22 76.0 45.8 8.7e-07 28.5 0.8 7.6 8 0 0 8 8 8 5 MORN repeat DUF3048_C PF17479.2 ORF15222 - 0.13 12.6 12.0 0.8 10.1 0.4 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain Pkinase PF00069.25 ORF151823 - 3.3e-55 187.3 0.0 3.7e-55 187.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF151823 - 1.9e-30 106.0 0.0 2.1e-30 105.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF151823 - 0.00023 20.6 0.0 0.00037 19.9 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Phage_holin_2_1 PF04971.12 ORF150739 - 0.093 12.7 2.9 0.62 10.1 0.0 2.7 3 0 0 3 3 3 0 Bacteriophage P21 holin S DUF1304 PF06993.12 ORF150739 - 0.55 10.2 7.0 0.11 12.5 3.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) Phage_holin_3_1 PF05106.12 ORF150739 - 1.2 9.6 7.5 0.23 11.9 0.4 2.1 1 1 1 2 2 2 0 Phage holin family (Lysis protein S) Man-6-P_recep PF02157.15 ORF150739 - 1.4 8.0 3.7 13 4.8 0.3 2.0 2 0 0 2 2 2 0 Mannose-6-phosphate receptor NSP2_assoc PF14758.6 ORF150557 - 0.028 14.8 1.1 0.037 14.4 1.1 1.1 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein NUDIX PF00293.28 ORF149311 - 1.9e-17 63.5 0.3 2.3e-17 63.3 0.3 1.1 1 0 0 1 1 1 1 NUDIX domain DUF4400 PF14348.6 ORF148867 - 0.084 12.4 1.0 0.13 11.8 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) MFMR_assoc PF16596.5 ORF148867 - 0.68 10.4 5.8 0.38 11.2 4.0 1.5 2 0 0 2 2 2 0 Disordered region downstream of MFMR zf-C3HC4_2 PF13923.6 ORF148350 - 2.7e-08 33.5 12.6 4.9e-08 32.7 12.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF148350 - 2.9e-08 33.4 11.9 4.8e-08 32.7 11.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF148350 - 8.6e-08 32.4 14.7 1.5e-07 31.6 14.7 1.4 1 0 0 1 1 1 1 Ring finger domain DUF1232 PF06803.12 ORF148350 - 1e-07 31.6 8.1 1.6e-07 31.0 8.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) zf-C3HC4 PF00097.25 ORF148350 - 1.1e-07 31.6 14.0 2e-07 30.7 14.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF148350 - 4.7e-06 26.5 11.5 1e-05 25.5 11.5 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF148350 - 1.4e-05 25.2 11.7 1.4e-05 25.2 11.7 1.6 2 0 0 2 2 1 1 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF148350 - 0.00011 22.2 7.3 0.00031 20.7 7.3 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF148350 - 0.00017 21.5 13.4 0.00018 21.4 12.2 1.7 1 1 1 2 2 2 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF148350 - 0.0012 18.6 17.6 0.037 13.9 15.9 2.3 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 ORF148350 - 0.12 12.7 15.0 0.83 10.0 15.0 2.1 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_4 PF14570.6 ORF148350 - 1.4 8.8 13.7 5.1 7.0 13.0 2.1 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain RPN2_C PF18004.1 ORF147549 - 0.0072 16.3 2.0 0.0096 15.8 2.0 1.2 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN2 C-terminal domain Fer4_8 PF13183.6 ORF147549 - 0.0087 16.5 1.1 0.014 15.8 1.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Nucleo_P87 PF07267.11 ORF147549 - 0.051 12.4 0.3 0.056 12.3 0.3 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 DUF2098 PF09871.9 ORF147549 - 0.28 11.6 1.6 0.41 11.0 1.6 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) Pox_Ag35 PF03286.14 ORF147549 - 0.57 9.9 7.1 0.94 9.2 7.1 1.3 1 1 0 1 1 1 0 Pox virus Ag35 surface protein RecJ_OB PF17768.1 ORF147274 - 0.058 13.6 0.8 0.38 11.0 0.4 2.0 1 1 1 2 2 2 0 RecJ OB domain IBB PF01749.20 ORF146312 - 0.019 15.4 0.2 0.031 14.7 0.2 1.5 1 1 0 1 1 1 0 Importin beta binding domain Rol_Rep_N PF18106.1 ORF146312 - 0.37 11.1 3.3 0.31 11.4 0.8 1.9 2 0 0 2 2 2 0 Rolling Circle replication initiation protein N-terminal domain Xpo1 PF08389.12 ORF145799 - 0.048 13.7 0.2 0.079 13.0 0.1 1.4 1 1 0 1 1 1 0 Exportin 1-like protein DUF4106 PF13388.6 ORF144413 - 0.32 10.2 0.3 0.44 9.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) Mx_ML PF17536.2 ORF144413 - 2.2 8.0 6.1 13 5.5 2.9 2.2 1 1 1 2 2 2 0 Matrix and Matrix long proteins N-terminal Vfa1 PF08432.10 ORF143676 - 0.11 12.9 10.4 0.13 12.5 10.4 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF1667 PF07892.11 ORF143676 - 0.14 12.2 2.1 0.38 10.8 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1667) Na_trans_assoc PF06512.13 ORF143676 - 0.15 12.4 10.4 0.17 12.2 10.4 1.1 1 0 0 1 1 1 0 Sodium ion transport-associated Ribonuc_2-5A PF06479.12 ORF143676 - 1.5 9.0 6.6 5.4 7.2 0.9 2.2 2 0 0 2 2 2 0 Ribonuclease 2-5A V_ATPase_I PF01496.19 ORF143676 - 1.8 6.4 8.0 2.1 6.1 8.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2514 PF10721.9 ORF143676 - 7.6 6.5 7.0 0.49 10.4 0.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2514) Tctex-1 PF03645.13 ORF143509 - 1.6e-12 47.6 0.0 2.5e-12 46.9 0.0 1.3 1 0 0 1 1 1 1 Tctex-1 family DUF924 PF06041.11 ORF14081 - 3.1e-43 148.0 2.0 3.5e-43 147.8 2.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) Skp1 PF01466.19 ORF1397 - 1.7e-12 47.3 0.2 2.8e-12 46.5 0.2 1.4 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF1397 - 1.4e-07 31.6 0.5 3e-07 30.5 0.5 1.6 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain UNC119_bdg PF15435.6 ORF137944 - 0.0032 17.0 1.3 0.004 16.7 1.3 1.3 1 0 0 1 1 1 1 UNC119-binding protein C5orf30 homologue FOP_dimer PF09398.10 ORF137826 - 0.018 15.3 0.0 0.03 14.6 0.0 1.3 1 0 0 1 1 1 0 FOP N terminal dimerisation domain DUF2880 PF11082.8 ORF137826 - 0.061 13.7 0.3 0.59 10.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2880) DUF3325 PF11804.8 ORF123306 - 0.16 12.1 1.4 5.1 7.3 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3325) PGA2 PF07543.12 ORF121935 - 0.0029 17.6 0.2 0.0047 16.9 0.2 1.3 1 0 0 1 1 1 1 Protein trafficking PGA2 Phage_holin_3_6 PF07332.11 ORF121935 - 0.015 15.3 1.5 1.9 8.5 0.0 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4131 PF13567.6 ORF121935 - 0.039 13.6 0.1 0.039 13.6 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) EZH2_N PF18601.1 ORF121074 - 0.93 9.9 5.8 1.1 9.7 0.5 3.0 1 1 2 3 3 3 0 EZH2 N-terminal domain TFIID-31kDa PF02291.15 ORF120577 - 0.023 14.8 1.0 0.033 14.3 1.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit DUF2344 PF10105.9 ORF120051 - 0.012 15.4 1.9 0.017 15.0 1.9 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) DivIVA PF05103.13 ORF120051 - 2.1 8.4 7.5 4.9 7.3 7.5 1.5 1 1 0 1 1 1 0 DivIVA protein Sigma70_r2 PF04542.14 ORF118958 - 0.12 12.2 0.0 0.65 9.8 0.0 1.9 2 0 0 2 2 2 0 Sigma-70 region 2 LPG_synthase_TM PF03706.13 ORF118451 - 0.015 14.9 0.2 0.018 14.6 0.2 1.1 1 0 0 1 1 1 0 Lysylphosphatidylglycerol synthase TM region Glyco_transf_8 PF01501.20 ORF116181 - 0.007 15.9 0.3 0.007 15.9 0.3 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 8 Tegument_dsDNA PF12818.7 ORF116181 - 0.27 10.3 0.0 0.34 10.0 0.0 1.1 1 0 0 1 1 1 0 dsDNA viral tegument protein Erf4 PF10256.9 ORF114819 - 1.9e-06 28.0 0.0 2.9e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family HNH_3 PF13392.6 ORF113996 - 1.2e-11 44.2 0.1 2.2e-11 43.3 0.1 1.5 1 0 0 1 1 1 1 HNH endonuclease HTH_Tnp_ISL3 PF13542.6 ORF113996 - 0.032 13.6 0.0 0.074 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Pkinase PF00069.25 ORF112970 - 3.3e-55 187.3 0.0 3.7e-55 187.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF112970 - 1.9e-30 106.0 0.0 2.1e-30 105.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF112970 - 0.00023 20.6 0.0 0.00037 19.9 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Got1 PF04178.12 ORF111107 - 1.7e-26 92.8 10.8 1.7e-26 92.8 10.8 1.8 1 1 1 2 2 2 2 Got1/Sft2-like family DuoxA PF10204.9 ORF111107 - 1.8 7.5 8.4 0.42 9.6 0.5 2.2 2 0 0 2 2 2 0 Dual oxidase maturation factor RecJ_OB PF17768.1 ORF110933 - 0.058 13.6 0.8 0.38 11.0 0.4 2.0 1 1 1 2 2 2 0 RecJ OB domain P2 PF07194.11 ORF110197 - 0.03 14.4 0.1 0.065 13.3 0.1 1.5 1 0 0 1 1 1 0 P2 response regulator binding domain NifW PF03206.14 ORF110197 - 1.1 9.8 6.3 8.9 6.9 0.1 2.5 1 1 1 2 2 2 0 Nitrogen fixation protein NifW DUF4186 PF13811.6 ORF109234 - 0.0066 16.5 0.1 0.0097 15.9 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4186) MRAP PF15183.6 ORF105671 - 0.01 15.8 0.0 0.024 14.6 0.0 1.7 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family ECF_trnsprt PF12822.7 ORF105671 - 0.014 15.5 0.1 0.022 14.9 0.1 1.3 1 0 0 1 1 1 0 ECF transporter, substrate-specific component PIG-Y PF15159.6 ORF105671 - 0.62 11.0 5.3 0.83 10.6 0.3 2.4 2 1 0 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF3069 PF11269.8 ORF105635 - 0.03 14.6 1.5 0.14 12.4 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3069) Muted PF14942.6 ORF105635 - 0.48 10.8 9.7 6.8 7.0 5.2 2.4 2 1 0 2 2 2 0 Organelle biogenesis, Muted-like protein His_Phos_1 PF00300.22 ORF103808 - 2.6e-28 99.1 0.0 3.1e-28 98.8 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Mesd PF10185.9 ORF102743 - 0.033 14.1 0.6 0.04 13.8 0.6 1.2 1 0 0 1 1 1 0 Chaperone for wingless signalling and trafficking of LDL receptor CHASE8 PF17152.4 ORF102743 - 0.17 12.2 0.0 0.24 11.7 0.0 1.3 1 0 0 1 1 1 0 Periplasmic sensor domain DUF2511 PF10709.9 ORF10261 - 2.3e-44 149.6 0.0 3.3e-44 149.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2511) CopD PF05425.13 ORF10261 - 1.9e-05 25.0 1.6 1.9e-05 25.0 1.6 1.5 2 0 0 2 2 2 1 Copper resistance protein D NSP2_assoc PF14758.6 ORF101405 - 0.028 14.8 1.1 0.037 14.4 1.1 1.1 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein MatE PF01554.18 ORF10065 - 5.5e-28 97.6 5.6 5.5e-28 97.6 5.6 2.0 2 0 0 2 2 2 1 MatE DUF5518 PF17647.1 ORF10065 - 2.1 8.5 13.3 0.23 11.6 2.2 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5518) MFS_1 PF07690.16 NODE_40179_length_517_cov_2.043568_g32718_i0forward_frame_1 - 4.5e-09 35.7 4.2 5.1e-09 35.5 4.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 NODE_40179_length_517_cov_2.043568_g32718_i0forward_frame_1 - 3.4e-07 29.2 1.4 4e-07 29.0 1.4 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein TrmO PF01980.16 NODE_40177_length_517_cov_2.406639_g32716_i0reverse_frame_1 - 0.14 12.4 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 tRNA-methyltransferase O DUF1870 PF08965.10 NODE_40176_length_517_cov_2.452282_g32715_i0forward_frame_1 - 0.062 13.3 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1870) PTPlike_phytase PF14566.6 NODE_40168_length_517_cov_4.937759_g32707_i0forward_frame_1 - 0.075 13.1 3.0 0.08 13.1 2.2 1.4 1 1 0 1 1 1 0 Inositol hexakisphosphate SUZ PF12752.7 NODE_40168_length_517_cov_4.937759_g32707_i0forward_frame_1 - 3.5 8.5 6.7 11 6.9 0.2 2.5 2 0 0 2 2 2 0 SUZ domain Lig_chan PF00060.26 NODE_40146_length_517_cov_144.732365_g32686_i0forward_frame_1 - 0.09 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Ligand-gated ion channel N-glycanase_C PF09113.10 NODE_40134_length_517_cov_337.228216_g32676_i0forward_frame_1 - 0.019 14.7 0.4 0.027 14.3 0.4 1.2 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal Thioredoxin PF00085.20 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 2.1e-19 69.4 0.1 3.7e-19 68.6 0.0 1.4 2 0 0 2 2 2 1 Thioredoxin OST3_OST6 PF04756.13 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 3.3e-05 23.4 0.0 4.3e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.00023 21.4 0.0 0.0019 18.5 0.0 2.1 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_7 PF13899.6 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.00043 20.4 0.4 0.0018 18.4 0.1 2.0 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_2 PF13098.6 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.0065 16.9 0.2 0.051 14.0 0.2 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain Phosducin PF02114.16 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.017 14.1 0.0 0.026 13.5 0.0 1.2 1 0 0 1 1 1 0 Phosducin AhpC-TSA PF00578.21 NODE_40128_length_517_cov_48403.406639_g32671_i0reverse_frame_1 - 0.031 14.2 0.0 0.049 13.6 0.0 1.4 1 0 0 1 1 1 0 AhpC/TSA family DUF5393 PF17371.2 NODE_40124_length_518_cov_2.250518_g32667_i0forward_frame_1 - 0.025 12.7 0.1 0.037 12.2 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5393) TBPIP PF07106.13 NODE_40121_length_518_cov_3.031056_g32664_i0reverse_frame_1 - 0.16 11.9 1.1 12 6.0 0.0 2.8 3 0 0 3 3 3 0 TBPIP/Hop2 winged helix domain Borrelia_P83 PF05262.11 NODE_40121_length_518_cov_3.031056_g32664_i0reverse_frame_1 - 1.2 7.5 15.8 1.5 7.2 15.8 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein MMR_HSR1 PF01926.23 NODE_40108_length_518_cov_79.575569_g32652_i0forward_frame_1 - 4e-05 23.7 0.0 7.9e-05 22.7 0.0 1.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 NODE_40108_length_518_cov_79.575569_g32652_i0forward_frame_1 - 0.00056 19.5 0.0 0.0016 18.0 0.0 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 NODE_40108_length_518_cov_79.575569_g32652_i0forward_frame_1 - 0.0022 18.1 0.0 0.004 17.2 0.0 1.4 1 0 0 1 1 1 1 Dynamin family Herpes_UL55 PF04537.12 NODE_40097_length_518_cov_150.354037_g32641_i0reverse_frame_1 - 0.026 14.5 0.5 0.055 13.5 0.5 1.6 1 1 0 1 1 1 0 Herpesvirus UL55 protein Pox_A14 PF05767.12 NODE_40091_length_518_cov_209.333333_g32636_i0forward_frame_1 - 0.32 11.2 5.6 0.65 10.2 0.1 2.6 2 1 1 3 3 3 0 Poxvirus virion envelope protein A14 Sarcoglycan_1 PF04790.13 NODE_40074_length_519_cov_3.082645_g32620_i0forward_frame_1 - 0.034 13.5 2.0 0.049 13.0 2.0 1.2 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein DUF5084 PF16894.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_1 - 0.024 15.0 1.8 0.046 14.2 1.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5084) ABC_tran PF00005.27 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_1 - 0.15 12.6 0.0 0.23 12.0 0.0 1.3 1 0 0 1 1 1 0 ABC transporter DUF4750 PF15938.5 NODE_40064_length_519_cov_75.398760_g32610_i0reverse_frame_1 - 0.7 9.6 6.6 2.1 8.1 1.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4750) fn2 PF00040.19 NODE_40055_length_519_cov_91.404959_g32601_i0reverse_frame_1 - 0.42 10.9 6.0 0.82 10.0 6.0 1.5 1 0 0 1 1 1 0 Fibronectin type II domain Myf5 PF12232.8 NODE_40044_length_519_cov_129.466942_g32590_i0reverse_frame_1 - 1.3 9.8 6.4 1.2 10.0 0.6 2.3 2 0 0 2 2 2 0 Myogenic determination factor 5 TFIIF_alpha PF05793.12 NODE_40044_length_519_cov_129.466942_g32590_i0forward_frame_1 - 4.8 5.7 4.7 5.4 5.5 4.7 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Peptidase_C54 PF03416.19 NODE_40043_length_519_cov_136.512397_g32589_i0reverse_frame_1 - 4e-38 131.4 0.0 4.6e-38 131.2 0.0 1.0 1 0 0 1 1 1 1 Peptidase family C54 CDH1_2_SANT_HL1 PF18375.1 NODE_40035_length_519_cov_183.382231_g32582_i0reverse_frame_1 - 1.4 9.7 9.4 2.1 9.1 2.9 2.2 1 1 1 2 2 2 0 CDH1/2 SANT-Helical linker 1 NADH_4Fe-4S PF10589.9 NODE_40023_length_519_cov_1202.502066_g32572_i0reverse_frame_1 - 0.12 12.4 0.7 0.56 10.3 0.7 2.1 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Gemini_AL3 PF01407.17 NODE_40017_length_520_cov_2.653608_g32566_i0reverse_frame_2 - 0.0023 17.8 1.9 0.0033 17.3 1.9 1.3 1 0 0 1 1 1 1 Geminivirus AL3 protein Corona_5a PF06336.11 NODE_40017_length_520_cov_2.653608_g32566_i0reverse_frame_2 - 0.39 10.7 9.7 0.17 11.9 1.1 2.6 1 1 1 2 2 2 0 Coronavirus 5a protein DUF22 PF01629.16 NODE_40017_length_520_cov_2.653608_g32566_i0forward_frame_3 - 0.15 11.8 1.3 0.33 10.7 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function DUF22 Rad51 PF08423.11 NODE_40014_length_520_cov_3.123711_g32563_i0reverse_frame_2 - 0.025 13.8 0.1 0.051 12.8 0.1 1.6 1 0 0 1 1 1 0 Rad51 LRR_11 PF18831.1 NODE_40014_length_520_cov_3.123711_g32563_i0forward_frame_2 - 0.013 15.0 3.9 23 4.7 0.0 5.2 2 1 3 6 6 6 0 Leucine-rich repeat RPAP3_C PF13877.6 NODE_40010_length_520_cov_4.746392_g32559_i0forward_frame_3 - 0.0087 16.6 0.5 0.014 15.9 0.5 1.3 1 0 0 1 1 1 1 Potential Monad-binding region of RPAP3 YdfA_immunity PF12127.8 NODE_40010_length_520_cov_4.746392_g32559_i0forward_frame_3 - 0.44 9.6 3.6 0.62 9.1 3.6 1.1 1 0 0 1 1 1 0 SigmaW regulon antibacterial Sec23_helical PF04815.15 NODE_40010_length_520_cov_4.746392_g32559_i0forward_frame_2 - 0.12 12.2 0.4 0.19 11.6 0.4 1.2 1 0 0 1 1 1 0 Sec23/Sec24 helical domain Sec1 PF00995.23 NODE_40007_length_520_cov_9.150515_g32556_i0forward_frame_2 - 1.1e-18 67.8 0.3 1.4e-18 67.5 0.3 1.1 1 0 0 1 1 1 1 Sec1 family Yos1 PF08571.10 NODE_39996_length_520_cov_73.519588_g32547_i0reverse_frame_3 - 0.18 12.1 0.0 0.29 11.4 0.0 1.4 1 0 0 1 1 1 0 Yos1-like Bul1_C PF04426.12 NODE_39996_length_520_cov_73.519588_g32547_i0forward_frame_2 - 0.27 10.6 0.1 0.37 10.2 0.1 1.2 1 0 0 1 1 1 0 Bul1 C terminus Ago_N_1 PF18351.1 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 0.67 10.4 9.3 2.5 8.6 1.7 2.8 1 1 2 3 3 3 0 Fungal Argonaute N-terminal domain Toxin_trans PF07952.12 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 1.3 8.1 8.9 1.6 7.8 8.9 1.1 1 0 0 1 1 1 0 Clostridium neurotoxin, Translocation domain DUF4047 PF13256.6 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 1.6 8.9 19.7 0.86 9.8 5.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4047) UPF0242 PF06785.11 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 3 7.9 25.9 4.6 7.3 25.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 NODE_39995_length_520_cov_82.369072_g32546_i0reverse_frame_3 - 4.6 6.5 20.8 6.1 6.1 20.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Thioredoxin_2 PF13098.6 NODE_39986_length_520_cov_105.253608_g32537_i0reverse_frame_3 - 0.13 12.7 0.1 15 6.1 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin-like domain Galactosyl_T PF01762.21 NODE_39986_length_520_cov_105.253608_g32537_i0reverse_frame_2 - 0.0054 16.6 0.0 0.0096 15.8 0.0 1.3 1 0 0 1 1 1 1 Galactosyltransferase ABC_tran PF00005.27 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 7.7e-32 110.7 0.1 9.1e-32 110.4 0.1 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 8.2e-07 29.1 0.8 0.00083 19.3 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 4.7e-05 22.9 0.3 0.046 13.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0011 18.6 0.1 0.0019 17.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.002 18.2 0.0 0.0038 17.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF87 PF01935.17 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0041 17.2 0.2 0.0088 16.2 0.1 1.6 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_23 PF13476.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0071 16.9 3.1 0.023 15.2 3.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0091 15.8 0.1 0.013 15.3 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.0095 15.7 0.0 0.026 14.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.033 14.6 0.0 0.038 14.4 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.04 13.6 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DEAD PF00270.29 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.052 13.3 1.5 0.22 11.3 1.5 1.8 1 1 0 1 1 1 0 DEAD/DEAH box helicase DUF505 PF04458.12 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.053 11.9 0.0 0.069 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) CsoSCA PF08936.10 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.053 12.2 0.1 0.07 11.8 0.1 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase NB-ARC PF00931.22 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.1 11.8 0.9 0.27 10.4 0.9 1.8 1 1 0 1 1 1 0 NB-ARC domain AAA_22 PF13401.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.1 12.8 0.2 1.3 9.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 NODE_39975_length_520_cov_306.350515_g32526_i0reverse_frame_3 - 0.31 10.7 1.4 0.65 9.7 1.4 1.4 1 1 0 1 1 1 0 AAA domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks141.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks141.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks141.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks141.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ABC_tran PF00005.27 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 2.1e-32 112.5 0.1 2.5e-32 112.3 0.1 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 3e-07 30.5 0.7 0.00084 19.2 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 5.1e-05 22.8 0.2 0.046 13.1 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0011 18.6 0.1 0.0019 17.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.002 18.2 0.0 0.0038 17.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TrwB_AAD_bind PF10412.9 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0028 16.6 0.7 0.014 14.4 0.7 1.8 1 1 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain DUF87 PF01935.17 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0039 17.3 0.2 0.0088 16.2 0.1 1.6 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_15 PF13175.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0061 16.3 0.5 0.013 15.2 0.5 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0086 16.6 3.2 0.023 15.2 3.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.0087 15.8 0.0 0.023 14.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.039 14.3 0.0 0.042 14.2 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain DEAD PF00270.29 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.04 13.7 1.6 0.18 11.6 1.6 1.8 1 1 0 1 1 1 0 DEAD/DEAH box helicase ATP-synt_ab PF00006.25 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.04 13.6 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_22 PF13401.6 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.1 12.9 0.2 1.3 9.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 NODE_39974_length_520_cov_323.202062_g32525_i0forward_frame_3 - 0.14 11.3 1.7 0.43 9.7 1.7 1.9 1 1 0 1 1 1 0 NB-ARC domain PsbH PF00737.20 NODE_39967_length_520_cov_4067.061856_g32519_i0forward_frame_3 - 9.8e-07 28.4 0.4 1.5e-06 27.8 0.4 1.3 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 NODE_39967_length_520_cov_4067.061856_g32519_i0forward_frame_3 - 0.034 13.9 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF3592 PF12158.8 NODE_39967_length_520_cov_4067.061856_g32519_i0forward_frame_3 - 0.058 13.5 0.1 0.082 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) Ycf70 PF17382.2 NODE_39967_length_520_cov_4067.061856_g32519_i0forward_frame_3 - 0.066 13.6 0.4 0.15 12.5 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized Ycf70-like DUF809 PF05663.11 NODE_39951_length_521_cov_52.477366_g27798_i1reverse_frame_3 - 1.5 9.0 4.6 1 9.5 3.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF809) DUF4894 PF16235.5 NODE_39948_length_521_cov_66.816872_g32504_i0reverse_frame_2 - 0.13 12.7 0.9 0.3 11.5 0.3 1.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4894) Jagunal PF07086.12 NODE_39948_length_521_cov_66.816872_g32504_i0forward_frame_3 - 8.1 6.5 9.6 47 4.0 9.6 2.0 1 1 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis DUF4227 PF14004.6 NODE_39948_length_521_cov_66.816872_g32504_i0forward_frame_3 - 8.6 6.4 7.7 0.4 10.7 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) Proteasome_A_N PF10584.9 NODE_39927_length_521_cov_144.553498_g32485_i0forward_frame_2 - 0.14 11.9 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Proteasome subunit A N-terminal signature PvlArgDC PF01862.16 NODE_39923_length_521_cov_237.699588_g32481_i0forward_frame_3 - 0.15 11.8 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) PEX11 PF05648.14 NODE_39920_length_521_cov_240.946502_g32479_i0reverse_frame_3 - 0.12 11.8 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Peroxisomal biogenesis factor 11 (PEX11) TMEM213 PF15192.6 NODE_39920_length_521_cov_240.946502_g32479_i0reverse_frame_2 - 0.0032 17.4 0.1 0.0065 16.4 0.1 1.5 1 0 0 1 1 1 1 TMEM213 family MNNL PF07657.13 NODE_39920_length_521_cov_240.946502_g32479_i0reverse_frame_2 - 0.042 13.9 0.1 0.042 13.9 0.1 2.0 2 0 0 2 2 2 0 N terminus of Notch ligand Osteoregulin PF07175.11 NODE_39895_length_522_cov_71.913758_g32458_i0reverse_frame_3 - 0.023 14.9 0.5 0.037 14.2 0.5 1.5 1 0 0 1 1 1 0 Osteoregulin TMEM237 PF15383.6 NODE_39895_length_522_cov_71.913758_g32458_i0reverse_frame_2 - 5.2 6.1 6.3 6.8 5.7 6.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 237 DUF5423 PF17461.2 NODE_39894_length_522_cov_72.882957_g32457_i0forward_frame_2 - 0.058 12.2 1.1 0.068 12.0 1.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) CbeA_antitoxin PF06154.11 NODE_39889_length_522_cov_86.677618_g32453_i0reverse_frame_3 - 0.15 12.7 0.0 0.24 12.0 0.0 1.3 1 0 0 1 1 1 0 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SDH_sah PF01972.16 NODE_39889_length_522_cov_86.677618_g32453_i0forward_frame_2 - 0.094 11.7 0.1 0.13 11.2 0.1 1.1 1 0 0 1 1 1 0 Serine dehydrogenase proteinase EBV-NA1 PF02905.14 NODE_39872_length_522_cov_137.147844_g32437_i0forward_frame_2 - 0.13 12.1 0.1 0.27 11.0 0.0 1.5 2 0 0 2 2 2 0 Epstein Barr virus nuclear antigen-1, DNA-binding domain Shisa PF13908.6 NODE_39870_length_522_cov_148.141684_g32435_i0forward_frame_2 - 2 8.6 2.7 2.6 8.3 2.7 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF2070 PF09843.9 NODE_39870_length_522_cov_148.141684_g32435_i0forward_frame_2 - 2.4 6.3 12.5 3 6.0 12.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DHHC PF01529.20 NODE_39870_length_522_cov_148.141684_g32435_i0forward_frame_2 - 6.7 6.8 7.6 1.4 9.0 3.7 1.8 1 1 1 2 2 2 0 DHHC palmitoyltransferase PI31_Prot_N PF11566.8 ORF97907 - 0.066 13.0 3.1 0.085 12.7 3.1 1.3 1 1 0 1 1 1 0 PI31 proteasome regulator N-terminal TOH_N PF12549.8 ORF97705 - 0.0038 17.0 2.4 0.0038 17.0 2.4 3.6 5 1 0 5 5 5 1 Tyrosine hydroxylase N terminal Barstar PF01337.18 ORF97404 - 8.9e-05 22.4 0.1 0.00015 21.8 0.1 1.3 1 0 0 1 1 1 1 Barstar (barnase inhibitor) DUF4391 PF14335.6 ORF97404 - 0.15 11.7 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) Marek_SORF3 PF07153.11 ORF918 - 0.018 14.4 0.3 0.021 14.2 0.3 1.2 1 0 0 1 1 1 0 Marek's disease-like virus SORF3 protein AKAP28 PF14469.6 ORF90894 - 4.2e-12 45.9 1.7 6.8e-12 45.2 1.7 1.4 1 1 0 1 1 1 1 28 kDa A-kinase anchor CorC_HlyC PF03471.17 ORF906 - 9e-06 25.6 0.0 1.3e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Transporter associated domain Spec3 PF15795.5 ORF90081 - 1.5e-09 38.3 16.4 0.00017 22.1 0.3 2.1 1 1 1 2 2 2 2 Ectodermal ciliogenesis protein GPR15L PF15854.5 ORF89918 - 0.17 12.2 2.1 0.14 12.4 0.4 1.8 2 0 0 2 2 2 0 G-protein coupled receptor ligand 15 Methyltransf_25 PF13649.6 ORF87732 - 1.2e-13 51.5 0.0 1.8e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF87732 - 2.6e-12 46.8 0.0 3.5e-12 46.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF87732 - 1.5e-10 41.2 0.0 1.6e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF87732 - 6.9e-10 39.4 0.0 1.2e-09 38.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF87732 - 9.5e-09 35.9 0.0 1.4e-08 35.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 ORF87732 - 6.8e-05 22.8 0.0 8.8e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF87732 - 0.00012 21.7 0.0 0.00016 21.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF87732 - 0.00044 20.3 0.0 0.00061 19.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF87732 - 0.00071 19.2 0.0 0.0016 18.0 0.0 1.6 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_9 PF08003.11 ORF87732 - 0.0027 16.7 0.0 0.0041 16.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Ubie_methyltran PF01209.18 ORF87732 - 0.0052 16.1 0.0 0.0077 15.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family AdoMet_MTase PF07757.13 ORF87732 - 0.0091 16.3 0.1 0.14 12.5 0.1 2.2 1 1 1 2 2 2 1 Predicted AdoMet-dependent methyltransferase PrmA PF06325.13 ORF87732 - 0.012 15.1 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 ORF87732 - 0.012 14.9 0.0 0.021 14.1 0.0 1.4 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase DREV PF05219.12 ORF87732 - 0.054 12.6 0.0 0.07 12.2 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase PCMT PF01135.19 ORF87732 - 0.085 12.6 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 ORF87732 - 0.092 11.8 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase TrkA_N PF02254.18 ORF87732 - 0.11 12.7 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Jacalin PF01419.17 ORF87319 - 4.7e-08 33.0 0.2 6.1e-08 32.7 0.2 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain Syntaxin PF00804.25 ORF86752 - 6.4e-16 58.6 2.2 6.4e-16 58.6 2.2 1.6 2 0 0 2 2 2 1 Syntaxin SNARE PF05739.19 ORF86752 - 2.4e-13 49.9 2.9 2.4e-13 49.9 2.9 2.0 2 0 0 2 2 2 1 SNARE domain DUF2207 PF09972.9 ORF86752 - 0.0018 17.1 0.3 0.0022 16.8 0.3 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) YesK PF14150.6 ORF86752 - 0.0044 17.2 0.8 0.0065 16.6 0.8 1.3 1 0 0 1 1 1 1 YesK-like protein Fusion_gly PF00523.18 ORF86752 - 0.023 13.0 4.3 0.016 13.5 2.8 1.5 1 1 0 1 1 1 0 Fusion glycoprotein F0 DASH_Dad4 PF08650.10 ORF86752 - 0.027 14.5 0.3 1.5 8.8 0.1 2.3 1 1 1 2 2 2 0 DASH complex subunit Dad4 Orf78 PF06024.12 ORF86752 - 0.041 14.2 0.7 0.041 14.2 0.7 1.8 2 1 0 2 2 2 0 Orf78 (ac78) ETRAMP PF09716.10 ORF86752 - 0.056 13.5 9.6 0.36 10.9 9.6 2.2 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) UbiA PF01040.18 ORF86752 - 0.096 12.0 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 UbiA prenyltransferase family Herpes_US9 PF06072.11 ORF86752 - 0.11 12.4 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 DUF2116 PF09889.9 ORF86752 - 0.21 11.6 1.3 0.41 10.7 1.3 1.4 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF3899 PF13038.6 ORF86752 - 0.24 11.9 1.2 0.53 10.8 0.0 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF3899) CD34_antigen PF06365.12 ORF86752 - 0.26 10.9 2.8 0.23 11.0 1.1 1.6 1 1 1 2 2 2 0 CD34/Podocalyxin family OppC_N PF12911.7 ORF86752 - 0.35 10.9 1.9 0.64 10.0 1.9 1.3 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C Syntaxin_2 PF14523.6 ORF86752 - 0.36 11.2 9.4 6.3 7.2 0.5 3.1 1 1 1 3 3 3 0 Syntaxin-like protein Prominin PF05478.11 ORF86752 - 0.66 7.9 10.2 0.27 9.1 2.5 1.7 1 1 1 2 2 2 0 Prominin DUF16 PF01519.16 ORF86752 - 9.2 6.8 9.1 17 5.9 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function DUF16 Synaptobrevin PF00957.21 ORF81261 - 0.013 15.2 0.9 0.026 14.3 0.9 1.4 1 0 0 1 1 1 0 Synaptobrevin MARVEL PF01284.23 ORF80408 - 0.012 15.6 3.8 0.13 12.3 0.4 2.1 2 0 0 2 2 2 0 Membrane-associating domain DUF2976 PF11190.8 ORF80408 - 0.04 13.7 4.2 0.12 12.2 0.1 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF2976) Cornichon PF03311.14 ORF80408 - 0.18 12.1 6.9 0.056 13.8 1.1 2.2 2 1 0 2 2 2 0 Cornichon protein DHHC PF01529.20 ORF80408 - 0.4 10.8 8.2 0.34 11.0 5.8 1.8 1 1 1 2 2 2 0 DHHC palmitoyltransferase TMEM126 PF07114.11 ORF77558 - 0.085 12.2 0.1 0.12 11.8 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 126 PPR_2 PF13041.6 ORF76981 - 9.4e-23 80.2 0.1 9.1e-12 45.0 0.0 3.6 1 1 2 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF76981 - 1.6e-12 47.3 0.0 2.2e-11 43.6 0.0 2.4 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF76981 - 2.6e-10 39.8 0.0 0.0011 18.6 0.0 3.2 3 1 0 3 3 3 2 PPR repeat PPR PF01535.20 ORF76981 - 3.3e-08 33.3 0.0 0.024 14.9 0.0 3.7 4 0 0 4 4 4 2 PPR repeat Clat_adaptor_s PF01217.20 ORF76880 - 3.6e-52 176.1 0.8 4.2e-52 175.9 0.8 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain CTU2 PF10288.9 ORF74422 - 0.21 11.9 2.8 0.6 10.4 2.8 2.0 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 DUF1156 PF06634.12 ORF72047 - 0.0063 16.6 1.9 0.011 15.8 1.9 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1156) Phe_ZIP PF08916.11 ORF71592 - 0.031 15.0 10.6 2.2 9.1 0.1 3.6 3 1 1 4 4 4 0 Phenylalanine zipper Ank_4 PF13637.6 ORF70985 - 2.9e-24 85.1 2.1 3.3e-09 37.1 0.1 3.8 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF70985 - 4.8e-23 80.9 0.2 2.7e-08 33.9 0.0 2.8 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF70985 - 4.8e-20 71.9 0.1 3.2e-12 46.9 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF70985 - 1.4e-16 58.9 0.1 0.00043 20.5 0.0 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF70985 - 3.1e-14 52.7 1.1 0.00018 21.8 0.1 3.6 3 0 0 3 3 3 3 Ankyrin repeat HCNGP PF07818.13 ORF68892 - 2.4e-14 53.7 1.3 2.4e-14 53.7 1.3 1.8 2 1 0 2 2 2 1 HCNGP-like protein XK-related PF09815.9 ORF64715 - 0.055 12.5 1.6 0.064 12.3 1.6 1.2 1 0 0 1 1 1 0 XK-related protein RhoGEF PF00621.20 ORF60540 - 0.00035 20.9 2.1 0.00049 20.4 2.1 1.2 1 0 0 1 1 1 1 RhoGEF domain GIDA_assoc PF13932.6 ORF60540 - 0.062 13.5 0.4 0.092 12.9 0.4 1.3 1 0 0 1 1 1 0 GidA associated domain CdiI_2 PF18593.1 ORF60540 - 0.083 13.6 0.6 0.17 12.5 0.3 1.7 1 1 1 2 2 2 0 CdiI immunity protein PDR_CDR PF06422.12 ORF60419 - 0.042 13.7 0.0 0.11 12.4 0.0 1.8 1 0 0 1 1 1 0 CDR ABC transporter SRP54 PF00448.22 ORF60339 - 7.2e-64 215.0 1.1 8e-64 214.9 1.1 1.0 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain Pkinase PF00069.25 ORF60267 - 1.9e-06 27.5 1.1 2.4e-06 27.1 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60267 - 0.0098 15.2 0.1 0.017 14.4 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 ORF60267 - 0.067 13.4 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 ABC1 family Imm7 PF15585.6 ORF60267 - 0.097 13.0 0.3 0.14 12.4 0.3 1.2 1 0 0 1 1 1 0 Immunity protein 7 bZIP_1 PF00170.21 ORF57472 - 0.00074 19.6 14.8 0.0034 17.4 11.0 2.4 1 1 1 2 2 2 2 bZIP transcription factor DUF2959 PF11172.8 ORF57472 - 0.0009 19.4 6.1 0.0014 18.9 6.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2959) ZapB PF06005.12 ORF57472 - 0.028 14.9 7.7 0.06 13.8 7.7 1.6 1 0 0 1 1 1 0 Cell division protein ZapB OmpH PF03938.14 ORF57472 - 0.03 14.7 6.5 0.04 14.3 6.5 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TMF_TATA_bd PF12325.8 ORF57472 - 0.036 14.3 8.0 0.077 13.2 8.0 1.6 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding bZIP_2 PF07716.15 ORF57472 - 0.059 13.5 17.1 0.31 11.2 8.4 2.3 2 0 0 2 2 2 0 Basic region leucine zipper FapA PF03961.13 ORF57472 - 0.069 11.7 4.1 0.079 11.6 4.1 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A UPF0242 PF06785.11 ORF57472 - 0.16 12.0 8.3 0.22 11.6 8.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus KxDL PF10241.9 ORF57472 - 0.17 12.2 7.9 0.31 11.3 7.9 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein YabA PF06156.13 ORF57472 - 0.24 12.1 5.6 0.51 11.0 5.6 1.6 1 0 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF57472 - 0.24 9.3 5.1 0.25 9.2 5.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Ax_dynein_light PF10211.9 ORF57472 - 0.58 10.1 10.8 0.96 9.4 10.8 1.3 1 0 0 1 1 1 0 Axonemal dynein light chain bZIP_Maf PF03131.17 ORF57472 - 0.68 10.5 9.6 0.71 10.4 7.2 2.0 1 1 1 2 2 2 0 bZIP Maf transcription factor DivIC PF04977.15 ORF57472 - 3.7 7.4 10.3 2.3 8.0 6.9 1.9 1 1 0 1 1 1 0 Septum formation initiator PTH2 PF01981.16 ORF56972 - 4.6e-41 139.8 0.0 5.5e-41 139.5 0.0 1.1 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 DIX PF00778.17 ORF56972 - 0.079 12.8 0.0 17 5.4 0.0 2.3 1 1 0 2 2 2 0 DIX domain Peptidase_M22 PF00814.25 ORF56972 - 0.097 12.4 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Glycoprotease family Sec66 PF09802.9 ORF56488 - 0.0056 16.3 0.2 0.0081 15.8 0.2 1.2 1 0 0 1 1 1 1 Preprotein translocase subunit Sec66 PALP PF00291.25 ORF50286 - 0.011 15.2 0.2 0.014 14.8 0.2 1.2 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme PfkB PF00294.24 ORF48369 - 3.2e-11 43.1 0.3 4.1e-11 42.7 0.3 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase RNase_H2-Ydr279 PF09468.10 ORF47797 - 0.029 14.6 0.6 0.041 14.1 0.6 1.1 1 0 0 1 1 1 0 Ydr279p protein family (RNase H2 complex component) wHTH domain Nrf1_activ_bdg PF10492.9 ORF47797 - 0.042 14.5 0.2 0.062 14.0 0.2 1.3 1 0 0 1 1 1 0 Nrf1 activator activation site binding domain EF-hand_7 PF13499.6 ORF4577 - 3.9e-11 43.2 6.7 3.1e-10 40.3 1.0 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF4577 - 6.7e-09 34.7 7.1 0.00022 20.6 0.1 3.6 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF4577 - 5e-08 32.7 4.9 9.2e-07 28.6 1.3 2.9 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF4577 - 8.5e-07 28.4 6.8 4.3e-05 23.1 0.2 3.7 3 0 0 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 ORF4577 - 0.015 14.8 2.2 0.017 14.6 0.1 2.3 3 0 0 3 3 3 0 EF hand DUF2267 PF10025.9 ORF4577 - 0.098 12.9 0.1 0.22 11.8 0.1 1.6 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) SPARC_Ca_bdg PF10591.9 ORF4577 - 0.51 10.7 7.5 1.4 9.3 7.5 1.9 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF4577 - 0.58 10.1 5.0 0.75 9.8 0.2 2.2 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand ADH_zinc_N_2 PF13602.6 ORF4556 - 0.00044 21.3 0.0 0.00068 20.7 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Corona_NS4 PF03905.13 ORF45225 - 0.00092 19.2 1.5 0.33 11.0 0.2 2.4 2 0 0 2 2 2 2 Coronavirus non-structural protein NS4 WHEP-TRS PF00458.20 ORF45199 - 0.021 15.0 0.9 0.042 14.0 0.9 1.4 1 0 0 1 1 1 0 WHEP-TRS domain MAP7 PF05672.11 ORF45199 - 0.047 13.4 11.5 0.059 13.1 11.5 1.2 1 0 0 1 1 1 0 MAP7 (E-MAP-115) family Iron_permease PF04120.12 ORF45199 - 0.15 11.9 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Low affinity iron permease Vfa1 PF08432.10 ORF45199 - 0.94 9.8 6.9 1.3 9.3 6.9 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 WI12 PF07107.11 ORF44793 - 9.2 6.4 8.5 0.83 9.8 1.9 2.1 2 0 0 2 2 2 0 Wound-induced protein WI12 zf-RING_2 PF13639.6 ORF44582 - 4.1e-13 49.4 6.4 4.1e-13 49.4 6.4 1.6 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF44582 - 8e-09 35.7 3.6 8e-09 35.7 3.6 1.7 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF44582 - 1.6e-08 34.5 0.8 4.5e-08 33.0 0.7 1.8 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF44582 - 2.9e-08 33.3 4.0 6e-08 32.3 4.0 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF44582 - 2.6e-07 30.4 5.5 5.3e-07 29.4 5.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF44582 - 2.9e-07 30.2 4.8 5.3e-07 29.4 4.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF44582 - 3e-07 30.4 1.3 5e-07 29.7 1.3 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF44582 - 4.7e-07 29.7 4.4 8e-07 28.9 4.4 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF44582 - 1.2e-06 28.3 4.6 2.1e-06 27.5 4.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF44582 - 9.2e-05 22.2 5.4 0.00016 21.4 5.4 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF44582 - 0.0012 18.5 5.0 0.0027 17.3 5.0 1.6 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF44582 - 0.0012 18.7 11.9 0.0027 17.6 4.3 2.5 3 0 0 3 3 2 1 Prokaryotic RING finger family 1 zf-RING_4 PF14570.6 ORF44582 - 0.0042 16.8 6.4 0.0042 16.8 6.4 1.6 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain Rtf2 PF04641.12 ORF44582 - 0.0044 16.4 0.2 0.0057 16.1 0.2 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-C3HC4_4 PF15227.6 ORF44582 - 0.0095 16.1 5.8 0.034 14.3 5.9 1.9 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF44582 - 0.023 14.7 0.2 0.042 13.8 0.2 1.4 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Vps39_2 PF10367.9 ORF44582 - 0.044 14.2 0.4 0.044 14.2 0.4 2.2 3 0 0 3 3 2 0 Vacuolar sorting protein 39 domain 2 U-box PF04564.15 ORF44582 - 0.14 12.4 0.0 0.36 11.1 0.0 1.6 2 0 0 2 2 2 0 U-box domain TMEM132D_C PF15706.5 ORF44582 - 0.14 11.9 0.2 0.23 11.2 0.2 1.3 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term zf-Nse PF11789.8 ORF44582 - 0.23 11.3 2.2 0.42 10.5 2.2 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit RINGv PF12906.7 ORF44582 - 0.6 10.3 10.1 0.84 9.8 6.9 2.5 2 1 0 2 2 2 0 RING-variant domain Ifi-6-16 PF06140.13 ORF43701 - 1.5e-12 47.3 26.6 1.5e-12 47.3 26.6 1.8 2 0 0 2 2 2 1 Interferon-induced 6-16 family HHH_5 PF14520.6 ORF43701 - 0.023 15.3 1.6 0.023 15.3 1.6 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain CAP PF00188.26 ORF42027 - 9e-10 39.5 0.0 1.1e-09 39.2 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family Rad60-SLD PF11976.8 ORF40895 - 0.071 12.9 1.9 0.58 10.0 1.9 2.3 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like DUF3135 PF11333.8 ORF38680 - 5.7 7.3 8.9 9.3 6.6 3.3 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3135) DUF3021 PF11457.8 ORF38617 - 0.97 9.8 11.8 0.38 11.1 6.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3021) OmpA PF00691.20 ORF36826 - 2.5e-22 79.1 0.0 4e-22 78.4 0.0 1.3 1 0 0 1 1 1 1 OmpA family DUF2457 PF10446.9 ORF36307 - 6.7 5.7 6.9 7.2 5.6 6.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Pkinase PF00069.25 ORF35243 - 1.9e-06 27.5 1.1 2.4e-06 27.1 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF35243 - 0.0098 15.2 0.1 0.017 14.4 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 ORF35243 - 0.067 13.4 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 ABC1 family Imm7 PF15585.6 ORF35243 - 0.097 13.0 0.3 0.14 12.4 0.3 1.2 1 0 0 1 1 1 0 Immunity protein 7 PI31_Prot_N PF11566.8 ORF34613 - 0.066 13.0 3.1 0.085 12.7 3.1 1.3 1 1 0 1 1 1 0 PI31 proteasome regulator N-terminal LysR_substrate PF03466.20 ORF32940 - 1.1e-30 106.6 0.1 1.2e-30 106.4 0.1 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Penaeidin PF05927.11 ORF32494 - 2 9.2 15.0 0.12 13.1 8.2 2.2 1 1 1 2 2 2 0 Penaeidin DHHC PF01529.20 ORF30303 - 6.2e-15 55.5 4.1 3.9e-13 49.7 4.1 2.1 1 1 0 1 1 1 1 DHHC palmitoyltransferase DUF2157 PF09925.9 ORF30303 - 0.14 12.0 5.3 0.19 11.5 5.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Tad PF13400.6 ORF30303 - 0.92 9.9 10.6 0.93 9.9 2.1 2.2 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like DUF3278 PF11683.8 ORF30161 - 1.6e-05 25.0 3.1 0.015 15.4 0.0 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF3278) PRA1 PF03208.19 ORF30161 - 0.046 13.4 3.1 0.065 12.8 3.1 1.2 1 0 0 1 1 1 0 PRA1 family protein DWNN PF08783.11 ORF30161 - 0.22 11.8 1.0 12 6.3 0.1 2.9 3 0 0 3 3 3 0 DWNN domain Pkinase PF00069.25 ORF29890 - 1.9e-06 27.5 1.1 2.4e-06 27.1 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29890 - 0.0098 15.2 0.1 0.017 14.4 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 ORF29890 - 0.067 13.4 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 ABC1 family Imm7 PF15585.6 ORF29890 - 0.097 13.0 0.3 0.14 12.4 0.3 1.2 1 0 0 1 1 1 0 Immunity protein 7 MORN PF02493.20 ORF28528 - 5.7e-34 114.0 36.4 4.3e-09 35.7 1.2 6.0 6 0 0 6 6 6 5 MORN repeat Tudor_2 PF18104.1 ORF28528 - 0.00044 19.9 9.8 0.76 9.5 0.2 4.6 4 0 0 4 4 4 2 Jumonji domain-containing protein 2A Tudor domain Transmemb_17 PF09799.9 ORF27629 - 1.2e-22 80.5 15.7 2e-22 79.8 15.7 1.4 1 0 0 1 1 1 1 Predicted membrane protein TMEM247 PF15444.6 ORF27629 - 6.5 6.7 6.1 1.2 9.2 0.0 2.0 2 0 0 2 2 2 0 Transmembrane protein 247 IQ PF00612.27 ORF26913 - 0.0072 16.0 3.2 0.0097 15.6 0.9 2.2 2 0 0 2 2 2 1 IQ calmodulin-binding motif HAD_2 PF13419.6 ORF26913 - 0.62 10.1 4.5 0.16 12.0 1.5 1.6 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase SOR PF07682.11 ORF2023 - 0.15 10.9 0.1 0.38 9.6 0.1 1.6 2 0 0 2 2 2 0 Sulphur oxygenase reductase ABG_transport PF03806.13 ORF20136 - 9.1e-72 241.9 17.9 1e-71 241.7 17.9 1.0 1 0 0 1 1 1 1 AbgT putative transporter family Na_sulph_symp PF00939.19 ORF20136 - 0.0072 15.4 11.3 0.009 15.1 11.3 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region DcuC PF03606.15 ORF20136 - 0.06 11.8 11.6 0.015 13.8 8.6 1.5 1 1 0 1 1 1 0 C4-dicarboxylate anaerobic carrier DUF3021 PF11457.8 ORF17444 - 0.97 9.8 11.8 0.38 11.1 6.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3021) Cwf_Cwc_15 PF04889.12 ORF1693 - 8.3e-05 22.4 8.5 9.5e-05 22.2 8.5 1.2 1 0 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein ERCC3_RAD25_C PF16203.5 ORF1693 - 0.075 12.2 0.1 0.15 11.2 0.0 1.6 1 1 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase PNISR PF15996.5 ORF1693 - 0.15 12.3 13.1 0.2 11.9 13.1 1.1 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR NTPase_I-T PF01931.18 ORF152946 - 1.8e-52 177.4 0.0 2.1e-52 177.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF84 DUF3021 PF11457.8 ORF149779 - 0.97 9.8 11.8 0.38 11.1 6.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3021) TANGO2 PF05742.12 ORF148935 - 8.1e-19 68.7 0.1 1.1e-18 68.2 0.1 1.2 1 0 0 1 1 1 1 Transport and Golgi organisation 2 Phage_lysis PF03245.13 ORF144016 - 1.7e-49 167.1 13.1 2.1e-49 166.9 13.1 1.1 1 0 0 1 1 1 1 Bacteriophage Rz lysis protein DUF2681 PF10883.8 ORF144016 - 0.00013 22.3 1.0 0.00026 21.3 1.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2681) PspB PF06667.12 ORF144016 - 0.012 15.7 0.5 0.028 14.4 0.1 1.8 2 1 0 2 2 2 0 Phage shock protein B Oleosin PF01277.17 ORF144016 - 0.089 12.6 0.4 0.2 11.4 0.1 1.7 2 0 0 2 2 2 0 Oleosin ZapB PF06005.12 ORF144016 - 0.11 12.9 0.2 0.11 12.9 0.2 1.7 2 1 0 2 2 2 0 Cell division protein ZapB CAP PF00188.26 ORF143993 - 9e-10 39.5 0.0 1.1e-09 39.2 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family RCC1 PF00415.18 ORF140276 - 0.034 14.8 0.1 0.087 13.5 0.0 1.6 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat MORN PF02493.20 ORF140263 - 6.8e-33 110.6 62.1 9.5e-09 34.7 3.3 7.3 8 0 0 8 8 8 6 MORN repeat DUF448 PF04296.13 ORF140263 - 0.11 12.4 7.4 1.9 8.4 0.2 4.0 3 1 1 4 4 4 0 Protein of unknown function (DUF448) DUF3048_C PF17479.2 ORF140263 - 1.6 9.2 19.8 0.55 10.6 1.3 3.8 1 1 3 4 4 4 0 Protein of unknown function (DUF3048) C-terminal domain DUF3099 PF11298.8 ORF139310 - 0.16 12.1 0.1 0.35 11.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) eIF_4EBP PF05456.11 ORF135502 - 0.068 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) SR-25 PF10500.9 ORF135247 - 0.032 13.8 12.2 0.049 13.2 12.2 1.3 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein AF-4 PF05110.13 ORF135247 - 0.034 12.3 19.2 0.033 12.3 19.2 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein SDA1 PF05285.12 ORF135247 - 0.063 12.7 20.7 0.07 12.5 20.7 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF135247 - 0.11 10.7 21.4 0.12 10.6 21.4 1.1 1 0 0 1 1 1 0 Nop14-like family Vfa1 PF08432.10 ORF135247 - 0.13 12.6 14.7 0.024 14.9 11.5 1.5 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 Apt1 PF10351.9 ORF135247 - 0.16 10.8 11.7 0.15 10.9 11.7 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Macoilin PF09726.9 ORF135247 - 0.19 10.3 9.8 0.2 10.2 9.8 1.1 1 0 0 1 1 1 0 Macoilin family XRN_M PF17846.1 ORF135247 - 0.21 10.5 7.0 0.25 10.3 7.0 1.3 1 0 0 1 1 1 0 Xrn1 helical domain DUF5523 PF17661.1 ORF135247 - 0.34 10.5 13.1 0.51 10.0 13.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5523) FAM60A PF15396.6 ORF135247 - 0.38 10.7 6.5 0.45 10.5 6.5 1.3 1 0 0 1 1 1 0 Protein Family FAM60A Tim54 PF11711.8 ORF135247 - 0.44 9.3 8.1 0.53 9.0 8.1 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Zip PF02535.22 ORF135247 - 0.46 9.7 7.7 0.42 9.8 7.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter NPR3 PF03666.13 ORF135247 - 0.57 8.9 11.7 0.61 8.8 11.7 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CDC45 PF02724.14 ORF135247 - 0.81 7.9 18.6 0.93 7.7 18.6 1.1 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF135247 - 1.1 7.3 18.8 1.3 7.0 18.8 1.2 1 0 0 1 1 1 0 DNA polymerase phi Menin PF05053.13 ORF135247 - 1.6 7.0 14.2 2.1 6.6 14.2 1.1 1 0 0 1 1 1 0 Menin Presenilin PF01080.17 ORF135247 - 2.2 7.0 14.7 2.8 6.6 14.7 1.1 1 0 0 1 1 1 0 Presenilin ANAPC1 PF12859.7 ORF135247 - 2.5 8.7 5.0 4.8 7.7 5.0 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 Hid1 PF12722.7 ORF135247 - 3.8 5.5 11.3 4 5.5 11.3 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein PNISR PF15996.5 ORF135247 - 3.9 7.7 16.0 5.4 7.2 16.0 1.3 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR SLC12 PF03522.15 ORF135247 - 5.4 5.9 9.6 5.4 5.9 9.6 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Gti1_Pac2 PF09729.9 ORF135247 - 7.1 6.7 13.1 11 6.1 13.1 1.3 1 0 0 1 1 1 0 Gti1/Pac2 family Pex14_N PF04695.13 ORF135247 - 7.4 7.2 8.6 12 6.5 8.6 1.4 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region CCDC106 PF15794.5 ORF135247 - 9.2 5.9 17.4 14 5.3 17.4 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 SpoIIIAH PF12685.7 ORF135247 - 9.7 6.0 19.2 14 5.4 19.2 1.3 1 0 0 1 1 1 0 SpoIIIAH-like protein TOH_N PF12549.8 ORF133558 - 0.0038 17.0 2.4 0.0038 17.0 2.4 3.6 5 1 0 5 5 5 1 Tyrosine hydroxylase N terminal zf-C3HC4_3 PF13920.6 ORF133424 - 9.4e-07 28.6 10.7 1.9e-06 27.6 10.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF133424 - 0.0016 18.3 8.1 0.0029 17.4 8.1 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF133424 - 0.012 15.5 8.6 0.012 15.5 8.6 2.1 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF133424 - 0.029 14.3 10.7 0.078 12.9 9.9 2.0 1 1 1 2 2 2 0 zinc-RING finger domain FKBP_N_2 PF18023.1 ORF133424 - 0.032 14.3 0.1 0.051 13.7 0.1 1.4 1 0 0 1 1 1 0 BDBT FKBP like N-terminal DUF4942 PF13708.6 ORF133424 - 0.037 14.0 0.4 0.044 13.8 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4942) zf-RING_2 PF13639.6 ORF133424 - 1.6 9.1 11.0 2.7 8.4 10.2 1.9 1 1 0 1 1 1 0 Ring finger domain Jacalin PF01419.17 ORF133284 - 1.1e-07 31.8 0.2 1.4e-07 31.5 0.2 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain RhoGEF PF00621.20 ORF133178 - 0.00035 20.9 2.1 0.00049 20.4 2.1 1.2 1 0 0 1 1 1 1 RhoGEF domain GIDA_assoc PF13932.6 ORF133178 - 0.062 13.5 0.4 0.092 12.9 0.4 1.3 1 0 0 1 1 1 0 GidA associated domain CdiI_2 PF18593.1 ORF133178 - 0.083 13.6 0.6 0.17 12.5 0.3 1.7 1 1 1 2 2 2 0 CdiI immunity protein CTU2 PF10288.9 ORF133053 - 0.21 11.9 2.8 0.6 10.4 2.8 2.0 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 RhoGEF PF00621.20 ORF132220 - 0.00035 20.9 2.1 0.00049 20.4 2.1 1.2 1 0 0 1 1 1 1 RhoGEF domain GIDA_assoc PF13932.6 ORF132220 - 0.062 13.5 0.4 0.092 12.9 0.4 1.3 1 0 0 1 1 1 0 GidA associated domain CdiI_2 PF18593.1 ORF132220 - 0.083 13.6 0.6 0.17 12.5 0.3 1.7 1 1 1 2 2 2 0 CdiI immunity protein Zip PF02535.22 ORF128495 - 0.21 10.8 0.8 0.23 10.6 0.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter PhzC-PhzF PF02567.16 ORF128495 - 0.28 10.6 3.3 0.33 10.4 3.3 1.1 1 0 0 1 1 1 0 Phenazine biosynthesis-like protein Presenilin PF01080.17 ORF128495 - 2.5 6.8 4.5 2.9 6.6 4.5 1.1 1 0 0 1 1 1 0 Presenilin CCDC106 PF15794.5 ORF12778 - 0.52 10.0 11.6 0.59 9.8 11.1 1.3 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 106 PPR_2 PF13041.6 ORF127483 - 9.4e-23 80.2 0.1 9.1e-12 45.0 0.0 3.6 1 1 2 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF127483 - 1.6e-12 47.3 0.0 2.2e-11 43.6 0.0 2.4 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF127483 - 2.6e-10 39.8 0.0 0.0011 18.6 0.0 3.2 3 1 0 3 3 3 2 PPR repeat PPR PF01535.20 ORF127483 - 3.3e-08 33.3 0.0 0.024 14.9 0.0 3.7 4 0 0 4 4 4 2 PPR repeat CSD PF00313.22 ORF125916 - 0.00038 20.3 1.3 0.00087 19.1 1.3 1.7 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF125916 - 0.00062 19.4 0.1 0.0011 18.6 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain CSD2 PF17876.1 ORF125916 - 0.037 14.2 0.0 0.066 13.4 0.0 1.3 1 0 0 1 1 1 0 Cold shock domain SH3BP5 PF05276.14 ORF125916 - 0.33 10.7 3.6 1.6 8.4 3.6 1.8 1 1 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) Tetraspanin PF00335.20 ORF12567 - 0.05 13.3 4.0 0.025 14.3 1.7 1.6 1 1 1 2 2 2 0 Tetraspanin family S100PBPR PF15427.6 ORF125378 - 0.0021 17.4 4.2 0.0024 17.2 4.2 1.1 1 0 0 1 1 1 1 S100P-binding protein Spore_YabQ PF09578.10 ORF124058 - 0.04 14.1 1.2 0.063 13.5 1.2 1.4 1 0 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) Pkinase PF00069.25 ORF122853 - 1.9e-06 27.5 1.1 2.4e-06 27.1 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF122853 - 0.0098 15.2 0.1 0.017 14.4 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase ABC1 PF03109.16 ORF122853 - 0.067 13.4 0.0 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 ABC1 family Imm7 PF15585.6 ORF122853 - 0.097 13.0 0.3 0.14 12.4 0.3 1.2 1 0 0 1 1 1 0 Immunity protein 7 Porin_OmpG PF09381.10 ORF122308 - 3.4e-66 223.9 5.1 3.8e-66 223.8 5.1 1.0 1 0 0 1 1 1 1 Outer membrane protein G (OmpG) OMP_b-brl PF13505.6 ORF122308 - 1.2e-06 28.8 8.2 1.6e-06 28.4 8.2 1.2 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain DUF2490 PF10677.9 ORF122308 - 0.0001 22.3 1.8 0.055 13.4 0.3 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF2490) DUF481 PF04338.12 ORF122308 - 0.00054 20.0 1.6 0.0013 18.8 0.3 1.9 2 0 0 2 2 2 1 Protein of unknown function, DUF481 DUF3187 PF11383.8 ORF122308 - 0.0071 15.6 0.4 0.16 11.1 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3187) Porin_4 PF13609.6 ORF122308 - 0.08 12.7 6.6 0.23 11.1 6.6 1.7 1 1 0 1 1 1 0 Gram-negative porin OmpA_membrane PF01389.17 ORF122308 - 0.11 12.2 4.2 1 9.1 0.8 2.2 1 1 0 2 2 2 0 OmpA-like transmembrane domain DUF1244 PF06844.11 ORF121768 - 0.11 12.7 0.6 0.21 11.8 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1244) Pullulanase_Ins PF18494.1 ORF120251 - 0.098 13.1 0.2 0.2 12.1 0.2 1.5 1 0 0 1 1 1 0 Pullulanase Ins domain PI3Ka PF00613.20 ORF120251 - 0.16 11.3 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) zf-RING_UBOX PF13445.6 ORF116989 - 0.036 14.1 0.3 0.097 12.7 0.3 1.7 1 0 0 1 1 1 0 RING-type zinc-finger RhoGEF PF00621.20 ORF114502 - 0.00035 20.9 2.1 0.00049 20.4 2.1 1.2 1 0 0 1 1 1 1 RhoGEF domain GIDA_assoc PF13932.6 ORF114502 - 0.062 13.5 0.4 0.092 12.9 0.4 1.3 1 0 0 1 1 1 0 GidA associated domain CdiI_2 PF18593.1 ORF114502 - 0.083 13.6 0.6 0.17 12.5 0.3 1.7 1 1 1 2 2 2 0 CdiI immunity protein Ank_4 PF13637.6 ORF113903 - 2.9e-24 85.1 2.1 3.3e-09 37.1 0.1 3.8 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF113903 - 4.8e-23 80.9 0.2 2.7e-08 33.9 0.0 2.8 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF113903 - 4.8e-20 71.9 0.1 3.2e-12 46.9 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF113903 - 1.4e-16 58.9 0.1 0.00043 20.5 0.0 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF113903 - 3.1e-14 52.7 1.1 0.00018 21.8 0.1 3.6 3 0 0 3 3 3 3 Ankyrin repeat Defensin_1 PF00323.19 ORF112250 - 0.5 11.0 13.4 0.61 10.7 4.5 3.6 3 0 0 3 3 3 0 Mammalian defensin MAM33 PF02330.16 ORF110085 - 4.5e-15 56.2 3.2 5.4e-15 55.9 3.2 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein SERTA PF06031.13 ORF110085 - 0.21 11.3 0.7 0.42 10.3 0.7 1.4 1 0 0 1 1 1 0 SERTA motif Copine PF07002.16 ORF106592 - 1.1e-48 165.6 0.0 1.2e-48 165.4 0.0 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF106592 - 9.5e-06 25.9 0.0 1.1e-05 25.6 0.0 1.1 1 0 0 1 1 1 1 vWA found in TerF C terminus TOH_N PF12549.8 ORF103406 - 0.0038 17.0 2.4 0.0038 17.0 2.4 3.6 5 1 0 5 5 5 1 Tyrosine hydroxylase N terminal Asp-Al_Ex PF06826.12 NODE_40356_length_514_cov_2.784969_g32885_i0forward_frame_1 - 2.3e-38 131.6 10.6 2.6e-38 131.5 10.6 1.0 1 0 0 1 1 1 1 Predicted Permease Membrane Region DUF819 PF05684.12 NODE_40356_length_514_cov_2.784969_g32885_i0forward_frame_1 - 0.0013 17.9 3.3 0.0013 17.9 3.3 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF819) PsbT PF01405.17 NODE_40356_length_514_cov_2.784969_g32885_i0forward_frame_1 - 3.6 7.5 6.3 0.8 9.6 1.0 2.7 2 0 0 2 2 2 0 Photosystem II reaction centre T protein Kelch_3 PF13415.6 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 1.1e-18 67.0 1.7 9e-07 29.0 0.0 3.1 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 1.4e-15 56.8 4.7 9.4e-05 22.3 0.0 4.1 4 0 0 4 4 4 3 Kelch motif Kelch_4 PF13418.6 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 1.5e-11 44.1 3.3 0.013 15.5 0.1 3.3 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 1.5e-09 37.8 0.8 0.0012 19.1 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_1 PF01344.25 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 2.3e-06 27.1 0.1 0.046 13.3 0.0 3.6 4 0 0 4 4 4 2 Kelch motif RAG2 PF03089.14 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 0.0012 17.9 0.0 0.04 12.9 0.0 2.1 1 1 1 2 2 2 2 Recombination activating protein 2 Kelch_2 PF07646.15 NODE_40352_length_514_cov_3.405010_g32881_i0reverse_frame_1 - 0.0027 17.6 5.6 0.29 11.2 0.1 3.8 3 1 0 3 3 3 2 Kelch motif PC_rep PF01851.22 NODE_40344_length_514_cov_31.116910_g32874_i0forward_frame_1 - 1.2e-06 28.7 0.4 0.24 11.9 0.0 3.5 3 0 0 3 3 3 2 Proteasome/cyclosome repeat DUF2769 PF10967.8 NODE_40343_length_514_cov_53.179541_g32873_i0reverse_frame_1 - 2.8 8.7 9.2 0.79 10.4 5.8 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2769) GATase1_like PF07090.11 NODE_40293_length_515_cov_2.318750_g32826_i0reverse_frame_1 - 0.14 11.5 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative glutamine amidotransferase PBP_sp32 PF07222.12 NODE_40292_length_515_cov_2.537500_g32825_i0reverse_frame_1 - 0.071 12.6 0.3 0.09 12.2 0.3 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 MORN PF02493.20 NODE_40292_length_515_cov_2.537500_g32825_i0reverse_frame_1 - 0.52 10.3 0.1 0.52 10.3 0.1 3.0 3 0 0 3 3 3 0 MORN repeat DUF1904 PF08921.11 NODE_40276_length_515_cov_78.285417_g32809_i0forward_frame_1 - 0.085 13.2 0.9 0.59 10.5 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1904) Pinin_SDK_N PF04697.13 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_1 - 1.7 9.3 8.0 2.3 8.9 6.1 1.9 2 0 0 2 2 2 0 pinin/SDK conserved region GTA_holin_3TM PF11351.8 NODE_40267_length_515_cov_92.333333_g32800_i0forward_frame_1 - 0.15 12.6 1.0 0.27 11.8 0.7 1.6 1 1 0 1 1 1 0 Holin of 3TMs, for gene-transfer release Methyltransf_16 PF10294.9 NODE_40259_length_515_cov_141.670833_g32792_i0forward_frame_1 - 2.3e-08 34.0 0.0 3e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase Pcc1 PF09341.10 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 0.051 13.7 0.0 0.08 13.1 0.0 1.3 1 0 0 1 1 1 0 Transcription factor Pcc1 Herpes_UL6 PF01763.16 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 0.13 10.8 12.9 0.15 10.6 12.9 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like AAA_11 PF13086.6 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 0.47 10.2 11.4 0.57 9.9 11.4 1.1 1 0 0 1 1 1 0 AAA domain SLIDE PF09111.10 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 1.2 9.2 17.6 0.16 12.0 12.0 2.1 1 1 2 3 3 3 0 SLIDE Exonuc_VII_L PF02601.15 NODE_40258_length_515_cov_143.875000_g32791_i0reverse_frame_1 - 4.3 6.8 11.5 5.3 6.5 11.5 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit SpoV PF08183.11 NODE_40229_length_516_cov_2.920998_g32764_i0reverse_frame_1 - 0.13 12.2 0.1 0.3 11.0 0.0 1.7 2 0 0 2 2 2 0 Stage V sporulation protein family T5orf172 PF10544.9 NODE_40219_length_516_cov_51.719335_g32754_i0reverse_frame_1 - 0.01 16.4 0.1 0.017 15.7 0.1 1.4 1 0 0 1 1 1 0 T5orf172 domain TCTP PF00838.17 NODE_40217_length_516_cov_71.528067_g32752_i0reverse_frame_1 - 0.11 12.9 3.3 0.066 13.5 1.3 1.6 2 0 0 2 2 2 0 Translationally controlled tumour protein Sid-5 PF17204.3 NODE_40217_length_516_cov_71.528067_g32752_i0forward_frame_1 - 0.91 9.7 8.0 5.3 7.3 2.2 2.5 2 0 0 2 2 2 0 Sid-5 family GCM PF03615.15 NODE_40214_length_516_cov_82.765073_g32749_i0reverse_frame_1 - 0.037 13.9 2.6 0.055 13.3 2.6 1.2 1 0 0 1 1 1 0 GCM motif protein DUF316 PF03761.15 NODE_40211_length_516_cov_91.918919_g32746_i0reverse_frame_1 - 0.011 15.4 0.0 0.015 14.9 0.0 1.1 1 0 0 1 1 1 0 Chymotrypsin family Peptidase-S1 MerB PF03243.15 NODE_40211_length_516_cov_91.918919_g32746_i0forward_frame_1 - 0.038 14.2 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 Alkylmercury lyase Ribosomal_L22e PF01776.17 NODE_40203_length_516_cov_152.933472_g31402_i1reverse_frame_1 - 3.7e-46 156.0 0.9 5.1e-46 155.5 0.9 1.2 1 0 0 1 1 1 1 Ribosomal L22e protein family DUF4357 PF14267.6 NODE_40200_length_516_cov_161.185031_g32737_i0forward_frame_1 - 0.13 12.2 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4357) Pkinase PF00069.25 NODE_40190_length_516_cov_359.060291_g32727_i0reverse_frame_1 - 0.00032 20.1 0.0 0.00046 19.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 NODE_40190_length_516_cov_359.060291_g32727_i0reverse_frame_1 - 0.00047 20.2 0.1 0.0023 17.9 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family Ammonium_transp PF00909.21 NODE_40183_length_516_cov_5414.189189_g32721_i0reverse_frame_1 - 6.5e-07 28.4 0.0 1.1e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Ammonium Transporter Family Dynein_heavy PF03028.15 NODE_40180_length_517_cov_1.881743_g32719_i0forward_frame_3 - 0.052 13.6 0.1 0.13 12.3 0.1 1.8 2 0 0 2 2 2 0 Dynein heavy chain region D6 P-loop domain Abhydrolase_2 PF02230.16 NODE_40178_length_517_cov_2.338174_g32717_i0forward_frame_2 - 1.9e-22 80.1 0.0 2.4e-22 79.8 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase FSH1 PF03959.13 NODE_40178_length_517_cov_2.338174_g32717_i0forward_frame_2 - 0.096 12.3 0.0 0.17 11.5 0.0 1.5 1 1 0 1 1 1 0 Serine hydrolase (FSH1) Iso_dh PF00180.20 NODE_40176_length_517_cov_2.452282_g32715_i0forward_frame_2 - 4.2e-32 111.7 0.0 4.9e-32 111.4 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Enterotoxin_b PF01376.18 NODE_40172_length_517_cov_2.790456_g32711_i0forward_frame_2 - 0.05 13.8 0.0 0.087 13.0 0.0 1.3 1 0 0 1 1 1 0 Heat-labile enterotoxin beta chain Med16 PF11635.8 NODE_40170_length_517_cov_3.468880_g32709_i0forward_frame_2 - 0.0087 14.0 2.4 0.012 13.6 2.4 1.1 1 0 0 1 1 1 1 Mediator complex subunit 16 TPR_1 PF00515.28 NODE_40165_length_517_cov_52.892116_g32704_i0forward_frame_3 - 0.0011 18.7 0.4 0.0023 17.7 0.4 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_40165_length_517_cov_52.892116_g32704_i0forward_frame_3 - 0.008 16.2 0.1 0.016 15.3 0.1 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat MIT PF04212.18 NODE_40165_length_517_cov_52.892116_g32704_i0forward_frame_3 - 0.038 14.1 0.4 0.078 13.1 0.4 1.5 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain TPR_7 PF13176.6 NODE_40165_length_517_cov_52.892116_g32704_i0forward_frame_3 - 0.13 12.3 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat GWT1 PF06423.12 NODE_40160_length_517_cov_78.369295_g32699_i0reverse_frame_3 - 3.1e-17 63.1 0.8 6.6e-17 62.0 0.7 1.5 2 0 0 2 2 2 1 GWT1 E1-E2_ATPase PF00122.20 NODE_40160_length_517_cov_78.369295_g32699_i0reverse_frame_3 - 2.3 7.7 3.5 0.54 9.7 0.5 1.5 2 0 0 2 2 2 0 E1-E2 ATPase P53 PF00870.18 NODE_40155_length_517_cov_89.587137_g32694_i0reverse_frame_3 - 0.047 13.4 0.5 0.064 13.0 0.5 1.1 1 0 0 1 1 1 0 P53 DNA-binding domain UPF0731 PF14982.6 NODE_40146_length_517_cov_144.732365_g32686_i0forward_frame_3 - 0.0017 18.5 0.9 0.012 15.7 0.3 2.3 2 0 0 2 2 2 1 UPF0731 family Vitelline_membr PF10542.9 NODE_40124_length_518_cov_2.250518_g32667_i0reverse_frame_3 - 0.17 11.8 2.9 4.7 7.2 0.3 2.4 2 0 0 2 2 2 0 Vitelline membrane cysteine-rich region DUF5333 PF17267.2 NODE_40121_length_518_cov_3.031056_g32664_i0reverse_frame_3 - 0.36 11.0 5.0 0.22 11.7 1.4 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5333) PsaX PF08078.12 NODE_40121_length_518_cov_3.031056_g32664_i0forward_frame_3 - 0.12 12.3 1.6 21 5.2 0.0 3.1 3 0 0 3 3 3 0 PsaX family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks142.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks142.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks142.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks142.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NSP2_assoc PF14758.6 NODE_40107_length_518_cov_82.215321_g32651_i0reverse_frame_2 - 0.049 14.0 0.1 0.099 13.0 0.1 1.4 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein Ada_Zn_binding PF02805.16 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_3 - 8.3 6.5 7.9 6.2 6.9 0.1 3.0 3 0 0 3 3 3 0 Metal binding domain of Ada RCC1_2 PF13540.6 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 3.1e-11 42.8 8.0 0.096 12.5 0.1 4.2 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Mitofilin PF09731.9 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 0.0022 16.9 0.1 0.0035 16.2 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial inner membrane protein DUF155 PF02582.14 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 0.0048 17.0 0.1 5.6 7.0 0.0 3.3 3 1 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Sec66 PF09802.9 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 0.018 14.6 0.0 2.1 7.9 0.0 2.5 2 1 1 3 3 3 0 Preprotein translocase subunit Sec66 WAK_assoc PF14380.6 NODE_40102_length_518_cov_94.590062_g32646_i0reverse_frame_2 - 0.071 13.9 0.1 24 5.7 0.0 3.1 2 2 1 3 3 3 0 Wall-associated receptor kinase C-terminal DUF2384 PF09722.10 NODE_40099_length_518_cov_147.267081_g32643_i0reverse_frame_3 - 0.027 14.5 0.0 0.055 13.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2384) HEPN-like_int PF18867.1 NODE_40091_length_518_cov_209.333333_g32636_i0forward_frame_2 - 0.081 12.8 0.7 0.34 10.8 0.1 2.0 2 0 0 2 2 2 0 HEPN-like integron domain Herpes_BLLF1 PF05109.13 NODE_40070_length_519_cov_11.142562_g32616_i0reverse_frame_3 - 0.39 8.6 11.5 0.5 8.3 11.5 1.0 1 0 0 1 1 1 0 Herpes virus major outer envelope glycoprotein (BLLF1) KASH_CCD PF14662.6 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 6.4e-05 22.9 8.0 8.8e-05 22.4 8.0 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH ATG16 PF08614.11 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0037 17.5 3.6 0.0048 17.1 3.6 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) Herpes_UL6 PF01763.16 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0041 15.7 1.1 0.0049 15.4 1.1 1.1 1 0 0 1 1 1 1 Herpesvirus UL6 like BicD PF09730.9 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0043 15.5 4.5 0.0052 15.3 4.5 1.1 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D TMF_TATA_bd PF12325.8 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0061 16.8 5.6 0.0089 16.2 5.6 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding zf-C4H2 PF10146.9 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.0068 16.7 3.2 0.01 16.1 3.2 1.4 1 0 0 1 1 1 1 Zinc finger-containing protein BST2 PF16716.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.007 16.9 4.4 0.014 16.0 4.4 1.4 1 0 0 1 1 1 1 Bone marrow stromal antigen 2 Wtap PF17098.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.011 15.6 3.3 0.017 15.1 3.3 1.3 1 0 0 1 1 1 0 WTAP/Mum2p family APG6_N PF17675.1 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.012 16.2 6.9 0.017 15.6 6.9 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region HIP1_clath_bdg PF16515.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.014 15.9 3.0 0.025 15.2 3.0 1.5 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF3552 PF12072.8 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.02 14.3 6.5 0.028 13.8 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Tup_N PF08581.10 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.03 14.6 0.3 0.03 14.6 0.3 2.4 1 1 1 2 2 2 0 Tup N-terminal DUF3450 PF11932.8 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.04 13.2 4.9 0.05 12.9 4.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TolA_bind_tri PF16331.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.058 13.5 4.4 0.1 12.7 4.4 1.4 1 1 0 1 1 1 0 TolA binding protein trimerisation YabA PF06156.13 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.079 13.6 4.1 0.13 12.9 4.1 1.5 1 0 0 1 1 1 0 Initiation control protein YabA DUF2312 PF10073.9 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.094 12.4 6.9 0.077 12.7 2.7 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Seryl_tRNA_N PF02403.22 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.11 12.7 10.3 0.17 12.1 9.0 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain JAKMIP_CC3 PF16034.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.12 12.3 8.1 0.37 10.7 8.1 1.8 1 1 0 1 1 1 0 JAKMIP CC3 domain Fzo_mitofusin PF04799.13 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.14 11.7 4.9 0.21 11.1 4.9 1.2 1 0 0 1 1 1 0 fzo-like conserved region Laminin_II PF06009.12 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.15 12.0 4.9 0.22 11.5 4.9 1.2 1 0 0 1 1 1 0 Laminin Domain II DUF1664 PF07889.12 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.16 12.0 4.8 0.39 10.8 5.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) PhoU PF01895.19 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.2 12.2 3.4 0.52 10.8 3.4 1.7 1 1 0 1 1 1 0 PhoU domain ApoO PF09769.9 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.26 11.3 0.8 0.51 10.3 0.3 1.7 1 1 1 2 2 2 0 Apolipoprotein O ARS2 PF04959.13 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.26 11.7 6.9 0.41 11.0 6.9 1.3 1 0 0 1 1 1 0 Arsenite-resistance protein 2 DUF4795 PF16043.5 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.29 10.7 11.7 0.15 11.6 9.0 1.8 1 1 0 2 2 2 0 Domain of unknown function (DUF4795) DUF4446 PF14584.6 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.3 11.1 4.3 0.43 10.6 4.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) TMPIT PF07851.13 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.32 10.2 3.8 0.39 9.9 3.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4337 PF14235.6 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.38 10.8 3.6 0.52 10.4 3.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) bZIP_2 PF07716.15 NODE_40069_length_519_cov_19.477273_g32615_i0reverse_frame_3 - 0.67 10.1 8.9 0.49 10.5 5.0 2.2 1 1 1 2 2 2 0 Basic region leucine zipper Consortin_C PF15281.6 NODE_40056_length_519_cov_89.679752_g32602_i0reverse_frame_2 - 0.14 12.2 1.8 1.7 8.7 0.0 2.4 2 0 0 2 2 2 0 Consortin C-terminus NAR2 PF16974.5 NODE_40056_length_519_cov_89.679752_g32602_i0forward_frame_3 - 0.0091 15.4 0.1 0.014 14.8 0.1 1.2 1 0 0 1 1 1 1 High-affinity nitrate transporter accessory Vac14_Fig4_bd PF11916.8 NODE_40044_length_519_cov_129.466942_g32590_i0reverse_frame_2 - 2.2e-09 37.2 1.3 3.7e-09 36.5 1.3 1.3 1 0 0 1 1 1 1 Vacuolar protein 14 C-terminal Fig4p binding E1-N PF14463.6 NODE_40044_length_519_cov_129.466942_g32590_i0forward_frame_2 - 0.52 10.1 7.4 0.99 9.2 7.4 1.4 1 1 0 1 1 1 0 E1 N-terminal domain Rrn6 PF10214.9 NODE_40035_length_519_cov_183.382231_g32582_i0reverse_frame_2 - 1.7 7.1 12.8 1.9 6.9 12.8 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF3459 PF11941.8 NODE_40035_length_519_cov_183.382231_g32582_i0forward_frame_2 - 0.067 13.5 0.1 0.22 11.8 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3459) Ribosomal_L40e PF01020.17 NODE_40035_length_519_cov_183.382231_g32582_i0forward_frame_2 - 3 7.8 8.0 0.14 12.1 2.1 1.8 2 0 0 2 2 2 0 Ribosomal L40e family Dynein_light PF01221.18 NODE_40023_length_519_cov_1202.502066_g32572_i0forward_frame_3 - 1.2e-30 105.7 0.5 1.8e-30 105.1 0.5 1.3 1 0 0 1 1 1 1 Dynein light chain type 1 DUF3433 PF11915.8 ORF96484 - 0.019 15.4 0.3 0.037 14.5 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3433) Ank_2 PF12796.7 ORF92203 - 1.1e-12 48.3 0.7 1.3e-11 44.9 0.1 2.2 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF92203 - 1.4e-12 47.9 0.2 5.7e-08 33.1 0.0 2.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF92203 - 1.5e-11 44.3 0.0 1.4e-09 38.0 0.0 2.7 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF92203 - 3.2e-11 43.1 0.1 5.8e-05 23.4 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF92203 - 3.3e-09 36.2 0.1 0.026 15.0 0.0 3.7 4 0 0 4 4 4 2 Ankyrin repeat mRNA_cap_C PF03919.15 ORF92203 - 0.0057 17.3 1.0 0.0091 16.6 0.9 1.4 1 1 0 1 1 1 1 mRNA capping enzyme, C-terminal domain PUA_3 PF17785.1 ORF92039 - 0.037 13.8 0.0 5 7.0 0.0 2.2 2 0 0 2 2 2 0 PUA-like domain PsaA_PsaB PF00223.19 ORF91735 - 2.6e-58 197.9 12.7 2.9e-58 197.7 12.7 1.0 1 0 0 1 1 1 1 Photosystem I psaA/psaB protein SirB PF04247.12 ORF91735 - 0.0056 16.8 2.4 0.011 15.8 2.4 1.5 1 0 0 1 1 1 1 Invasion gene expression up-regulator, SirB DUF2208 PF09973.9 ORF91735 - 0.18 11.4 1.1 0.3 10.7 1.1 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) PHD_3 PF13922.6 ORF91577 - 0.018 15.4 2.1 0.024 15.0 0.9 1.8 2 0 0 2 2 2 0 PHD domain of transcriptional enhancer, Asx Phage_holin_3_3 PF16083.5 ORF91577 - 0.19 11.9 0.2 0.27 11.4 0.2 1.3 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III CcmE PF03100.15 ORF91056 - 9.1e-46 155.0 0.0 1.1e-45 154.7 0.0 1.1 1 0 0 1 1 1 1 CcmE DUF5031 PF16434.5 ORF91056 - 0.033 13.4 0.0 0.038 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5031) DUF2628 PF10947.8 ORF91056 - 0.11 12.8 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) SPRY PF00622.28 ORF85916 - 4.4e-12 46.2 0.0 5.6e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 SPRY domain Orn_Arg_deC_N PF02784.16 ORF85654 - 0.15 11.4 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SBP56 PF05694.11 ORF82525 - 0.72 8.6 3.1 1 8.1 3.1 1.1 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) DnaJ_CXXCXGXG PF00684.19 ORF82525 - 0.84 10.0 16.7 6.9 7.1 12.3 2.4 2 0 0 2 2 2 0 DnaJ central domain ubiquitin PF00240.23 ORF82142 - 1.2e-23 82.7 3.2 5.3e-15 54.9 0.1 2.9 2 1 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF82142 - 1.4e-08 34.4 2.9 3.3e-05 23.6 0.2 2.6 2 1 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF82142 - 0.018 15.5 2.2 0.34 11.4 0.1 2.9 2 2 0 2 2 2 0 Ubiquitin-like domain Plexin_cytopl PF08337.12 ORF82142 - 0.057 12.1 0.2 0.076 11.7 0.2 1.3 1 0 0 1 1 1 0 Plexin cytoplasmic RasGAP domain TBK1_ULD PF18396.1 ORF82142 - 0.096 12.6 0.1 0.22 11.4 0.0 1.7 2 0 0 2 2 2 0 TANK binding kinase 1 ubiquitin-like domain Zip PF02535.22 ORF80536 - 0.24 10.6 0.6 0.27 10.4 0.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Paramyxo_ncap PF00973.19 ORF80536 - 4.7 6.0 7.5 5.4 5.8 7.5 1.0 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Acetyltransf_17 PF17668.1 ORF80304 - 0.13 13.0 0.1 0.17 12.7 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Fer4_6 PF12837.7 ORF78148 - 0.14 12.3 1.5 0.29 11.3 1.5 1.5 1 0 0 1 1 1 0 4Fe-4S binding domain Ceramidase PF05875.12 ORF7748 - 5.9e-18 65.2 10.3 7.2e-18 65.0 10.3 1.1 1 0 0 1 1 1 1 Ceramidase DUF2721 PF11026.8 ORF7748 - 0.85 9.5 6.8 0.32 10.9 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) NiFeSe_Hases PF00374.19 ORF77370 - 0.095 11.6 0.0 0.15 10.9 0.0 1.2 1 0 0 1 1 1 0 Nickel-dependent hydrogenase HEAT_2 PF13646.6 ORF77349 - 6.6e-05 23.2 0.0 0.0016 18.8 0.0 2.2 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF77349 - 0.015 15.5 0.0 8.5 6.9 0.0 3.4 3 0 0 3 3 3 0 HEAT repeat EF-hand_7 PF13499.6 ORF75185 - 2.2e-12 47.3 6.2 5.4e-06 26.8 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF75185 - 6e-11 41.1 4.1 8.6e-06 24.9 0.1 3.3 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF75185 - 3.3e-10 39.0 5.6 7.2e-06 25.5 0.3 3.4 3 0 0 3 3 3 3 EF-hand domain EF-hand_8 PF13833.6 ORF75185 - 2.8e-05 23.9 5.2 0.0074 16.1 0.1 3.5 2 2 2 4 4 4 1 EF-hand domain pair PHB_acc_N PF07879.11 ORF75185 - 0.0012 18.9 0.1 0.021 14.9 0.0 2.2 2 0 0 2 2 2 1 PHB/PHA accumulation regulator DNA-binding domain EF-hand_9 PF14658.6 ORF75185 - 0.0016 18.7 0.1 2 8.8 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF75185 - 0.026 14.0 0.8 0.071 12.6 0.0 2.2 2 1 0 2 2 2 0 EF hand MHCassoc_trimer PF08831.10 ORF72852 - 1.2 9.2 6.8 0.18 11.8 1.6 2.3 2 1 1 3 3 3 0 Class II MHC-associated invariant chain trimerisation domain GABP-alpha PF11620.8 ORF71372 - 0.19 12.0 0.0 0.31 11.3 0.0 1.4 1 0 0 1 1 1 0 GA-binding protein alpha chain EF-hand_6 PF13405.6 ORF69386 - 0.00035 20.3 0.1 0.00089 19.0 0.0 1.7 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF69386 - 0.0009 19.6 0.0 0.002 18.6 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF69386 - 0.013 15.0 0.0 0.03 13.9 0.0 1.6 1 0 0 1 1 1 0 EF hand Selenoprotein_S PF06936.11 ORF69386 - 0.045 13.6 0.1 0.045 13.6 0.1 1.6 2 0 0 2 2 2 0 Selenoprotein S (SelS) EF-hand_5 PF13202.6 ORF69386 - 0.23 11.0 0.8 0.57 9.8 0.0 2.0 2 0 0 2 2 2 0 EF hand SepRS_C PF18006.1 ORF66494 - 5e-05 23.3 0.1 2.9 8.1 0.0 4.9 4 2 2 6 6 6 1 O-phosphoseryl-tRNA synthetase C-terminal domain DUF4873 PF16170.5 ORF66494 - 0.2 11.9 6.3 4.2 7.7 0.1 3.3 1 1 3 4 4 4 0 Domain of unknown function (DUF4873) DUF2020 PF09449.10 ORF66494 - 2.9 7.7 9.5 3.7 7.4 0.1 3.4 1 1 2 4 4 4 0 Domain of unknown function (DUF2020) Acetyltransf_17 PF17668.1 ORF6608 - 0.13 13.0 0.1 0.17 12.7 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain MS_channel PF00924.18 ORF65388 - 3.4e-44 150.9 0.1 3.8e-44 150.7 0.1 1.0 1 0 0 1 1 1 1 Mechanosensitive ion channel NAD_binding_10 PF13460.6 ORF64777 - 2.2e-15 57.0 0.0 3.4e-15 56.4 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding DUF2417 PF10329.9 ORF63636 - 0.0076 15.7 0.4 0.0095 15.4 0.4 1.1 1 0 0 1 1 1 1 Region of unknown function (DUF2417) ATP11 PF06644.11 ORF63636 - 0.031 14.1 0.5 0.029 14.2 0.5 1.1 1 0 0 1 1 1 0 ATP11 protein Band_3_cyto PF07565.13 ORF63636 - 0.097 12.5 1.4 0.14 11.9 1.4 1.2 1 0 0 1 1 1 0 Band 3 cytoplasmic domain SR-25 PF10500.9 ORF63636 - 0.099 12.2 20.2 0.14 11.8 20.2 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Macoilin PF09726.9 ORF63636 - 0.12 10.9 5.6 0.15 10.5 5.6 1.1 1 0 0 1 1 1 0 Macoilin family Corona_nucleoca PF00937.18 ORF63636 - 0.89 8.5 6.5 1.1 8.2 6.5 1.1 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein DUF515 PF04415.12 ORF63636 - 1.9 6.8 9.7 2.4 6.4 9.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) FA_desaturase PF00487.24 ORF63039 - 0.079 12.8 8.1 0.1 12.4 8.1 1.3 1 0 0 1 1 1 0 Fatty acid desaturase T2SSF PF00482.23 ORF63039 - 0.2 11.6 0.0 0.2 11.6 0.0 2.2 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein F TraG_N PF07916.11 ORF63039 - 1.5 7.6 11.6 1.7 7.4 11.6 1.1 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF2207 PF09972.9 ORF63039 - 6.8 5.3 12.1 8.3 5.0 12.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1700 PF08006.11 ORF63039 - 8 6.0 13.3 10 5.6 13.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Tetraspanin PF00335.20 ORF63039 - 9.5 5.9 13.6 12 5.6 13.6 1.2 1 0 0 1 1 1 0 Tetraspanin family DUF4191 PF13829.6 ORF63039 - 9.9 5.4 9.2 12 5.2 9.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) MIF4G_like_2 PF09090.11 ORF62497 - 1.2e-12 47.9 3.6 1.5e-12 47.6 3.6 1.1 1 0 0 1 1 1 1 MIF4G like zf-Tim10_DDP PF02953.15 ORF62497 - 0.042 13.5 0.1 0.095 12.4 0.1 1.6 1 0 0 1 1 1 0 Tim10/DDP family zinc finger TPT PF03151.16 ORF61803 - 2.6e-06 27.0 3.6 3e-06 26.8 3.1 1.2 1 1 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF61803 - 0.095 12.9 7.7 0.15 12.2 7.7 1.5 1 1 0 1 1 1 0 EamA-like transporter family LapA_dom PF06305.11 ORF61803 - 0.12 12.2 1.8 0.13 12.1 0.4 1.8 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain SRP19 PF01922.17 ORF6178 - 3.2e-30 104.9 0.1 3.2e-30 104.9 0.1 1.5 2 0 0 2 2 2 1 SRP19 protein PTA_PTB PF01515.19 ORF61061 - 8.6e-78 261.8 0.4 9.6e-78 261.7 0.4 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase Cyclin PF08613.11 ORF60908 - 8.4e-19 68.5 0.0 1.2e-18 68.0 0.0 1.2 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF60908 - 0.027 14.2 0.0 0.046 13.5 0.0 1.3 1 0 0 1 1 1 0 Cyclin, N-terminal domain Mesd PF10185.9 ORF60112 - 1.4e-06 28.4 1.0 1.8e-06 27.9 1.0 1.1 1 0 0 1 1 1 1 Chaperone for wingless signalling and trafficking of LDL receptor GRP PF07172.11 ORF60112 - 0.0019 18.8 0.7 0.0019 18.8 0.7 2.1 2 0 0 2 2 2 1 Glycine rich protein family RCC1 PF00415.18 ORF59164 - 0.033 14.8 0.1 0.086 13.5 0.0 1.6 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat YajC PF02699.15 ORF56482 - 0.019 14.8 0.5 0.031 14.1 0.5 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit TadE PF07811.12 ORF56482 - 9 6.7 8.0 16 5.9 8.0 1.5 1 1 0 1 1 1 0 TadE-like protein Shisa PF13908.6 ORF56482 - 9.2 6.5 11.4 71 3.6 11.4 2.0 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator ArAE_1 PF06081.11 ORF55935 - 0.031 14.4 0.3 2.6 8.2 0.0 2.3 2 0 0 2 2 2 0 Aromatic acid exporter family member 1 RbcS PF12338.8 ORF55935 - 4 7.7 5.5 34 4.7 0.1 3.2 4 0 0 4 4 4 0 Ribulose-1,5-bisphosphate carboxylase small subunit IGF2_C PF08365.11 ORF5550 - 0.013 15.4 5.1 1.3 9.1 0.2 2.5 2 0 0 2 2 2 0 Insulin-like growth factor II E-peptide RICTOR_V PF14668.6 ORF55499 - 0.07 13.4 0.2 0.15 12.4 0.2 1.5 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, domain 5 DUF1593 PF07632.11 ORF52426 - 0.058 12.8 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1593) DHHC PF01529.20 ORF5106 - 9.5e-20 71.1 17.8 1.2e-19 70.7 17.8 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase PsbN PF02468.15 ORF50378 - 2.3e-13 49.7 0.2 2.3e-13 49.7 0.2 2.1 2 0 0 2 2 2 1 Photosystem II reaction centre N protein (psbN) PLDc_2 PF13091.6 ORF50079 - 3.5e-22 78.7 0.0 5.2e-22 78.2 0.0 1.2 1 0 0 1 1 1 1 PLD-like domain PLDc PF00614.22 ORF50079 - 2.5e-05 24.3 0.0 6.1e-05 23.0 0.0 1.7 1 0 0 1 1 1 1 Phospholipase D Active site motif UPA_2 PF17809.1 ORF48223 - 0.045 13.6 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 UPA domain STAR_dimer PF16544.5 ORF45079 - 0.034 13.7 0.7 4.2 7.0 0.2 2.3 2 0 0 2 2 2 0 Homodimerisation region of STAR domain protein RSN1_7TM PF02714.15 ORF44382 - 5.6e-09 35.7 4.7 5.6e-09 35.7 4.7 1.5 2 0 0 2 2 2 1 Calcium-dependent channel, 7TM region, putative phosphate Gal-3-0_sulfotr PF06990.11 ORF43845 - 0.092 11.6 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Galactose-3-O-sulfotransferase Strep_his_triad PF04270.13 ORF43845 - 0.1 12.6 0.0 0.31 11.1 0.0 1.7 2 0 0 2 2 2 0 Streptococcal histidine triad protein Type2_restr_D3 PF16902.5 ORF43737 - 0.11 12.4 0.4 1.4 8.8 0.0 2.5 2 1 0 2 2 2 0 Type-2 restriction enzyme D3 domain RRM_1 PF00076.22 ORF43173 - 1.5e-14 53.5 0.0 3.2e-08 33.3 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABC_tran PF00005.27 ORF42814 - 6.9e-11 42.8 0.1 1.9e-10 41.4 0.1 1.7 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF42814 - 1.4e-06 27.9 0.2 1.9e-06 27.5 0.2 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF1908 PF08926.11 ORF42814 - 0.078 12.1 0.3 0.095 11.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) DDRGK PF09756.9 ORF42814 - 0.08 12.5 1.0 0.12 11.9 1.0 1.3 1 0 0 1 1 1 0 DDRGK domain cNMP_binding PF00027.29 ORF42476 - 4.9e-11 42.6 0.0 1e-10 41.5 0.0 1.5 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain THEG PF14912.6 ORF41788 - 0.055 13.9 0.9 0.17 12.4 0.9 1.8 1 1 0 1 1 1 0 Testicular haploid expressed repeat RhoGEF PF00621.20 ORF408 - 0.027 14.7 0.2 0.035 14.4 0.2 1.2 1 0 0 1 1 1 0 RhoGEF domain DUF3278 PF11683.8 ORF408 - 0.052 13.6 0.6 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3278) UQ_con PF00179.26 ORF40214 - 1.2e-34 118.9 0.0 1.4e-34 118.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF40214 - 0.0065 16.7 0.2 0.0077 16.5 0.3 1.4 1 1 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 ORF40214 - 0.046 13.4 0.0 0.05 13.3 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family B TBCA PF02970.16 ORF40214 - 0.094 13.1 0.0 0.28 11.5 0.0 1.6 2 0 0 2 2 2 0 Tubulin binding cofactor A Got1 PF04178.12 ORF38281 - 5.1e-33 113.9 21.6 9.4e-33 113.0 20.3 1.8 1 1 1 2 2 2 2 Got1/Sft2-like family DUF3429 PF11911.8 ORF38281 - 0.0013 19.1 0.5 0.0013 19.1 0.5 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3429) DUF2244 PF10003.9 ORF38281 - 0.0097 15.6 5.4 0.0097 15.6 5.4 1.9 2 0 0 2 2 2 1 Integral membrane protein (DUF2244) Asp4 PF16996.5 ORF38281 - 0.057 13.2 2.9 2 8.3 0.1 2.5 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 DUF4064 PF13273.6 ORF38281 - 0.25 11.6 14.6 0.7 10.2 14.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) DUF417 PF04224.12 ORF38281 - 0.75 9.3 9.1 0.11 12.0 3.0 2.0 1 1 1 2 2 2 0 Protein of unknown function, DUF417 DUF3021 PF11457.8 ORF38281 - 1.8 8.9 19.4 4.8 7.5 19.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3021) DUF2614 PF11023.8 ORF38281 - 2.5 8.2 11.3 16 5.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-ribbon containing domain DUF5408 PF17402.2 ORF38281 - 6.2 6.8 7.8 1 9.3 0.5 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5408) Ac81 PF05820.11 ORF38281 - 7.7 6.0 11.3 0.62 9.6 5.4 1.9 2 0 0 2 2 2 0 Baculoviridae AC81 DUF1505 PF07403.11 ORF36999 - 0.14 12.3 4.8 0.22 11.7 4.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) PKD_3 PF16820.5 ORF35094 - 0.02 14.6 0.1 0.042 13.6 0.1 1.5 1 0 0 1 1 1 0 PKD-like domain EF-hand_7 PF13499.6 ORF34735 - 2.2e-12 47.3 6.2 5.4e-06 26.8 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF34735 - 6e-11 41.1 4.1 8.6e-06 24.9 0.1 3.3 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF34735 - 3.3e-10 39.0 5.6 7.2e-06 25.5 0.3 3.4 3 0 0 3 3 3 3 EF-hand domain EF-hand_8 PF13833.6 ORF34735 - 2.8e-05 23.9 5.2 0.0074 16.1 0.1 3.5 2 2 2 4 4 4 1 EF-hand domain pair PHB_acc_N PF07879.11 ORF34735 - 0.0012 18.9 0.1 0.021 14.9 0.0 2.2 2 0 0 2 2 2 1 PHB/PHA accumulation regulator DNA-binding domain EF-hand_9 PF14658.6 ORF34735 - 0.0016 18.7 0.1 2 8.8 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF34735 - 0.026 14.0 0.8 0.071 12.6 0.0 2.2 2 1 0 2 2 2 0 EF hand MORN PF02493.20 ORF34673 - 1.1e-07 31.3 8.2 0.04 13.8 0.4 5.7 4 1 0 4 4 4 3 MORN repeat MORN_2 PF07661.13 ORF34673 - 9.1 6.9 0.0 9.1 6.9 0.0 4.0 5 0 0 5 5 5 0 MORN repeat variant Dscam_C PF12355.8 ORF34344 - 0.066 14.2 1.9 0.1 13.6 1.9 1.3 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal TCTP PF00838.17 ORF33711 - 9.3e-21 74.9 1.1 1.1e-20 74.7 1.1 1.0 1 0 0 1 1 1 1 Translationally controlled tumour protein EF-hand_1 PF00036.32 ORF32977 - 6.2e-06 25.4 0.0 1.1e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF32977 - 1.6e-05 24.5 0.0 2.8e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF32977 - 0.0078 15.7 0.0 0.014 14.9 0.0 1.3 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF32977 - 0.042 13.7 0.0 0.067 13.1 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_7 PF13499.6 ORF32977 - 0.062 13.8 0.0 0.1 13.1 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair DUF3721 PF12518.8 ORF32977 - 0.9 9.4 4.3 4.5 7.2 4.3 2.3 1 1 0 1 1 1 0 Protein of unknown function Trypan_PARP PF05887.11 ORF32813 - 0.18 11.8 0.4 0.26 11.3 0.4 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) 53-BP1_Tudor PF09038.10 ORF31052 - 0.086 12.8 0.1 0.53 10.2 0.0 2.2 1 1 1 2 2 2 0 Tumour suppressor p53-binding protein-1 Tudor RecO_C PF02565.15 ORF31052 - 0.1 12.4 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Recombination protein O C terminal Acetyltransf_17 PF17668.1 ORF27662 - 0.13 13.0 0.1 0.17 12.7 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF3368 PF11848.8 ORF27295 - 0.049 13.4 0.1 0.43 10.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3368) Thioredoxin PF00085.20 ORF27171 - 1.8e-16 60.0 0.0 2.6e-16 59.5 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_4 PF13462.6 ORF27171 - 0.0017 18.5 0.0 0.0034 17.5 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin TraF PF13728.6 ORF27171 - 0.0045 16.9 0.0 0.0059 16.5 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF27171 - 0.1 12.9 0.0 19 5.7 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin-like Hat1_N PF10394.9 ORF26131 - 0.0064 16.7 1.8 0.0084 16.4 1.8 1.1 1 0 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus TIR_3 PF18567.1 ORF26131 - 0.098 12.7 0.2 0.17 11.9 0.2 1.5 1 1 0 1 1 1 0 Toll/interleukin-1 receptor domain RRN9 PF10680.9 ORF20398 - 0.024 14.9 0.6 0.04 14.2 0.6 1.4 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor DUF4716 PF15837.5 ORF20398 - 2.7 8.1 14.4 2 8.6 1.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) PARP PF00644.20 ORF19743 - 2.3e-23 82.8 2.8 1.4e-21 77.0 2.8 2.1 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Tox-ART-HYD1 PF15633.6 ORF19743 - 0.026 15.2 0.0 0.061 14.0 0.0 1.6 2 0 0 2 2 2 0 HYD1 signature containing ADP-ribosyltransferase DAP10 PF07213.11 ORF19443 - 0.22 11.5 5.8 0.6 10.1 5.8 1.7 1 0 0 1 1 1 0 DAP10 membrane protein ELFV_dehydrog PF00208.21 ORF1868 - 4.6e-23 82.2 0.0 6.2e-23 81.8 0.0 1.2 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Bac_GDH PF05088.12 ORF1868 - 0.00033 18.3 0.0 0.00037 18.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial NAD-glutamate dehydrogenase Semialdhyde_dh PF01118.24 ORF1868 - 0.16 12.4 0.0 0.29 11.6 0.0 1.4 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain EF-hand_7 PF13499.6 ORF18303 - 2.2e-12 47.3 6.2 5.4e-06 26.8 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF18303 - 6e-11 41.1 4.1 8.6e-06 24.9 0.1 3.3 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF18303 - 3.3e-10 39.0 5.6 7.2e-06 25.5 0.3 3.4 3 0 0 3 3 3 3 EF-hand domain EF-hand_8 PF13833.6 ORF18303 - 2.8e-05 23.9 5.2 0.0074 16.1 0.1 3.5 2 2 2 4 4 4 1 EF-hand domain pair PHB_acc_N PF07879.11 ORF18303 - 0.0012 18.9 0.1 0.021 14.9 0.0 2.2 2 0 0 2 2 2 1 PHB/PHA accumulation regulator DNA-binding domain EF-hand_9 PF14658.6 ORF18303 - 0.0016 18.7 0.1 2 8.8 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF18303 - 0.026 14.0 0.8 0.071 12.6 0.0 2.2 2 1 0 2 2 2 0 EF hand Ras PF00071.22 ORF16738 - 1.7e-38 131.8 0.2 2e-38 131.5 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF16738 - 1.1e-18 67.6 0.1 1.7e-18 67.0 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF16738 - 2.6e-06 27.0 0.0 3.1e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF16738 - 0.021 14.4 0.0 0.027 14.0 0.0 1.2 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain SID PF11778.8 ORF152079 - 2.3 8.3 4.9 6.7 6.8 0.7 2.2 2 0 0 2 2 2 0 Septation initiation Pro_isomerase PF00160.21 ORF149634 - 6.1e-49 166.3 0.2 6.8e-49 166.2 0.2 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EIID-AGA PF03613.14 ORF147443 - 3.9e-62 209.8 9.4 4.4e-62 209.7 9.4 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component Carb_anhydrase PF00194.21 ORF146372 - 6.8e-30 104.5 0.4 8.6e-30 104.1 0.4 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase PUA_3 PF17785.1 ORF145747 - 0.037 13.8 0.0 5 7.0 0.0 2.2 2 0 0 2 2 2 0 PUA-like domain PgpA PF04608.13 ORF144478 - 6.1e-51 172.2 8.7 7e-51 172.0 8.7 1.0 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A TfoX_N PF04993.13 ORF144478 - 0.25 11.6 0.3 0.42 10.9 0.3 1.3 1 0 0 1 1 1 0 TfoX N-terminal domain DUF4281 PF14108.6 ORF144478 - 0.48 10.8 6.9 0.7 10.3 2.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4281) Nsp1_C PF05064.13 ORF143041 - 7.9e-10 38.6 7.2 1e-09 38.2 3.8 2.2 2 0 0 2 2 2 1 Nsp1-like C-terminal region GAS PF13851.6 ORF143041 - 0.00054 19.4 1.8 0.00075 18.9 1.5 1.3 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding Bul1_C PF04426.12 ORF143041 - 0.0067 15.9 0.1 0.0076 15.7 0.1 1.1 1 0 0 1 1 1 1 Bul1 C terminus CHASE PF03924.13 ORF143041 - 0.014 15.3 1.4 0.019 14.9 1.4 1.2 1 0 0 1 1 1 0 CHASE domain Snapin_Pallidin PF14712.6 ORF143041 - 0.018 15.5 4.4 0.49 10.9 0.1 2.8 1 1 1 2 2 2 0 Snapin/Pallidin Prefoldin_2 PF01920.20 ORF143041 - 0.024 14.6 5.4 2.5 8.1 0.9 2.8 3 0 0 3 3 3 0 Prefoldin subunit Filament PF00038.21 ORF143041 - 0.042 13.4 7.6 0.87 9.1 0.1 2.0 1 1 1 2 2 2 0 Intermediate filament protein Fib_alpha PF08702.10 ORF143041 - 0.056 13.6 2.9 1.4 9.1 0.2 2.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Syntaxin-6_N PF09177.11 ORF143041 - 0.3 11.7 2.6 1.8 9.2 2.6 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF1664 PF07889.12 ORF143041 - 0.49 10.4 5.9 4.3 7.4 0.2 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 ORF143041 - 0.58 10.2 4.2 16 5.5 4.2 2.3 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF16 PF01519.16 ORF143041 - 1.4 9.4 7.0 9.1 6.8 2.7 2.7 1 1 0 2 2 2 0 Protein of unknown function DUF16 ZapB PF06005.12 ORF143041 - 1.5 9.3 10.0 13 6.3 0.1 2.7 2 1 0 2 2 2 0 Cell division protein ZapB Ribosomal_L33 PF00471.20 ORF140923 - 1.4e-12 47.9 0.0 1.9e-12 47.4 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L33 DUF572 PF04502.13 ORF140142 - 4.5 6.8 29.6 5.1 6.6 29.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) SdpI PF13630.6 ORF13997 - 0.0066 16.6 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 SdpI/YhfL protein family SPRY PF00622.28 ORF134006 - 4.4e-12 46.2 0.0 5.6e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 SPRY domain STAR_dimer PF16544.5 ORF133646 - 0.034 13.7 0.7 4.2 7.0 0.2 2.3 2 0 0 2 2 2 0 Homodimerisation region of STAR domain protein DUF3580 PF12117.8 ORF133556 - 0.057 13.7 0.4 0.45 10.7 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3580) SID PF11778.8 ORF131156 - 2.3 8.3 4.9 6.7 6.8 0.7 2.2 2 0 0 2 2 2 0 Septation initiation CS PF04969.16 ORF131121 - 2.3e-10 41.4 0.1 3.7e-10 40.7 0.1 1.3 1 0 0 1 1 1 1 CS domain Dynein_light PF01221.18 ORF131121 - 0.2 12.0 0.0 0.32 11.3 0.0 1.3 1 0 0 1 1 1 0 Dynein light chain type 1 SPRY PF00622.28 ORF130405 - 4.4e-12 46.2 0.0 5.6e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 SPRY domain RasGAP_C PF03836.15 ORF130026 - 0.0083 16.3 1.0 0.35 11.0 0.4 2.2 2 0 0 2 2 2 2 RasGAP C-terminus DUF3437 PF11919.8 ORF130026 - 0.11 12.5 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) RDD PF06271.12 ORF128066 - 2.1 8.5 7.1 13 6.0 6.9 2.0 1 1 0 1 1 1 0 RDD family Jacalin PF01419.17 ORF121122 - 2.6e-08 33.8 0.6 3.6e-08 33.4 0.6 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain OTCace_N PF02729.21 ORF120169 - 0.13 12.3 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Jacalin PF01419.17 ORF118885 - 3.6e-07 30.2 0.1 4.5e-07 29.9 0.1 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain XFP PF03894.15 ORF118642 - 0.076 12.7 0.0 0.092 12.5 0.0 1.1 1 0 0 1 1 1 0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase HTH_32 PF13565.6 ORF116516 - 1.8 9.2 6.4 4.4 8.0 4.1 2.2 1 1 1 2 2 2 0 Homeodomain-like domain RhoGEF PF00621.20 ORF116261 - 0.027 14.7 0.2 0.035 14.4 0.2 1.2 1 0 0 1 1 1 0 RhoGEF domain DUF3278 PF11683.8 ORF116261 - 0.052 13.6 0.6 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3278) GM_CSF PF01109.17 ORF115768 - 0.076 13.2 0.1 0.16 12.2 0.1 1.5 1 1 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor HTH_ABP1_N PF18107.1 ORF115102 - 1.9 8.3 6.3 0.24 11.1 0.6 2.5 2 1 0 2 2 2 0 Fission yeast centromere protein N-terminal domain BLI1 PF17324.2 ORF114734 - 0.48 11.1 15.7 0.62 10.8 6.4 2.3 1 1 1 2 2 2 0 BLOC-1 interactor 1 tRNA_anti-like PF12869.7 ORF11329 - 0.0014 18.2 0.1 0.0022 17.6 0.1 1.2 1 0 0 1 1 1 1 tRNA_anti-like Cid2 PF09774.9 ORF11329 - 0.097 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Caffeine-induced death protein 2 FTR1 PF03239.14 ORF11329 - 0.23 10.6 0.2 0.28 10.3 0.2 1.1 1 0 0 1 1 1 0 Iron permease FTR1 family Chloroplast_duf PF14476.6 ORF112887 - 0.02 13.9 0.0 0.023 13.7 0.0 1.0 1 0 0 1 1 1 0 Petal formation-expressed Herpes_pp38 PF04846.13 ORF112887 - 0.055 13.4 0.3 0.097 12.6 0.3 1.4 1 0 0 1 1 1 0 Herpesvirus pp38 phosphoprotein DUF866 PF05907.13 ORF111482 - 5.9e-24 84.7 0.0 6.9e-24 84.5 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF866) Tgi2PP PF18250.1 ORF111482 - 0.028 14.6 0.0 0.19 11.9 0.0 2.2 2 0 0 2 2 2 0 Effector immunity protein Tgi2PP SID PF11778.8 ORF108885 - 2.3 8.3 4.9 6.7 6.8 0.7 2.2 2 0 0 2 2 2 0 Septation initiation Jacalin PF01419.17 ORF108747 - 3.7e-09 36.6 0.5 5e-09 36.2 0.5 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain AMMECR1 PF01871.17 ORF108580 - 5e-24 84.8 0.0 6.2e-24 84.5 0.0 1.2 1 0 0 1 1 1 1 AMMECR1 GP4 PF03010.14 ORF108243 - 0.022 14.7 0.2 0.029 14.3 0.2 1.2 1 0 0 1 1 1 0 GP4 SID PF11778.8 ORF107095 - 2.3 8.3 4.9 6.7 6.8 0.7 2.2 2 0 0 2 2 2 0 Septation initiation Aldo_ket_red PF00248.21 ORF105469 - 1.5e-24 86.7 0.0 1.9e-24 86.4 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family DUF1489 PF07370.11 ORF100194 - 0.093 12.5 0.3 0.15 11.8 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1489) LEAP-2 PF07359.11 ORF100194 - 0.93 9.4 4.3 6.7 6.6 1.6 2.5 2 1 0 2 2 2 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) DUF4483 PF14825.6 NODE_40534_length_511_cov_2.254202_g33043_i0forward_frame_1 - 2.3e-08 33.9 0.0 3.5e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4483) Rsm1 PF08600.10 NODE_40521_length_511_cov_17.500000_g33030_i0forward_frame_1 - 0.14 12.3 0.4 0.14 12.3 0.4 1.9 2 0 0 2 2 2 0 Rsm1-like Rhodanese PF00581.20 NODE_40507_length_511_cov_100.957983_g33017_i0forward_frame_1 - 0.0006 20.3 0.0 0.00092 19.7 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain APH PF01636.23 NODE_40494_length_511_cov_352.831933_g33005_i0reverse_frame_1 - 0.0015 18.5 0.0 0.0022 18.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 NODE_40494_length_511_cov_352.831933_g33005_i0reverse_frame_1 - 0.17 11.3 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain ANAPC15 PF15243.6 NODE_40484_length_512_cov_2.249476_g33000_i0forward_frame_1 - 0.12 12.8 0.0 0.18 12.2 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 15 DUF948 PF06103.11 NODE_40483_length_512_cov_2.318658_g32999_i0forward_frame_1 - 0.24 11.7 4.1 3.5 7.9 0.3 3.0 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Lectin_N PF03954.14 NODE_40483_length_512_cov_2.318658_g32999_i0forward_frame_1 - 1.2 8.9 7.2 0.69 9.7 4.4 1.8 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Prominin PF05478.11 NODE_40483_length_512_cov_2.318658_g32999_i0forward_frame_1 - 2.7 5.8 5.9 1.3 6.9 3.9 1.4 1 1 0 1 1 1 0 Prominin LMBR1 PF04791.16 NODE_40483_length_512_cov_2.318658_g32999_i0forward_frame_1 - 6.4 5.6 12.2 7.2 5.4 12.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Xpo1 PF08389.12 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 4.3e-06 26.8 1.0 7.4e-06 26.1 1.0 1.4 1 0 0 1 1 1 1 Exportin 1-like protein Katanin_con80 PF13925.6 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 0.00079 19.5 0.0 0.18 11.9 0.0 2.3 1 1 1 2 2 2 2 con80 domain of Katanin IBN_N PF03810.19 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 0.016 15.1 0.2 9.8 6.2 0.0 3.0 3 1 0 3 3 3 0 Importin-beta N-terminal domain Vac14_Fab1_bd PF12755.7 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 0.056 14.0 1.6 0.11 13.0 1.6 1.7 1 1 0 1 1 1 0 Vacuolar 14 Fab1-binding region Totivirus_coat PF05518.11 NODE_40482_length_512_cov_2.566038_g32998_i0reverse_frame_1 - 0.08 11.0 0.0 0.11 10.6 0.0 1.1 1 0 0 1 1 1 0 Totivirus coat protein KH_1 PF00013.29 NODE_40457_length_512_cov_118.044025_g32974_i0forward_frame_1 - 3.3e-17 62.1 0.2 5.5e-17 61.4 0.2 1.4 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 NODE_40457_length_512_cov_118.044025_g32974_i0forward_frame_1 - 0.0005 19.8 0.2 0.00099 18.9 0.2 1.5 1 1 0 1 1 1 1 KH domain EF-hand_7 PF13499.6 NODE_40445_length_512_cov_226.637317_g32962_i0reverse_frame_1 - 0.00049 20.5 0.1 0.00079 19.8 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_40445_length_512_cov_226.637317_g32962_i0reverse_frame_1 - 0.0067 15.9 0.1 0.013 15.0 0.1 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_40445_length_512_cov_226.637317_g32962_i0reverse_frame_1 - 0.14 12.2 0.2 0.27 11.3 0.2 1.5 1 0 0 1 1 1 0 EF-hand domain Zn-ribbon_8 PF09723.10 NODE_40445_length_512_cov_226.637317_g32962_i0reverse_frame_1 - 0.47 10.6 5.4 1.1 9.5 5.4 1.6 1 0 0 1 1 1 0 Zinc ribbon domain Ribosomal_S27 PF01599.19 NODE_40440_length_512_cov_383.197065_g32957_i0forward_frame_1 - 0.0033 17.5 0.1 1.9 8.7 0.0 2.4 2 0 0 2 2 2 2 Ribosomal protein S27a HNHc_6 PF16784.5 NODE_40438_length_512_cov_517.914046_g32956_i0forward_frame_1 - 0.0092 15.6 0.0 0.015 14.9 0.0 1.4 1 0 0 1 1 1 1 Putative HNHc nuclease Ly49 PF08391.10 NODE_40438_length_512_cov_517.914046_g32956_i0forward_frame_1 - 0.014 15.8 3.4 0.014 15.8 3.4 1.7 2 1 0 2 2 2 0 Ly49-like protein, N-terminal region DUF3290 PF11694.8 NODE_40438_length_512_cov_517.914046_g32956_i0forward_frame_1 - 0.64 10.0 5.6 3.3 7.7 5.6 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3290) DUF5624 PF18538.1 NODE_40435_length_512_cov_872.448637_g32953_i0reverse_frame_1 - 0.00023 21.3 0.9 0.00042 20.4 0.9 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5624) CBM_4_9 PF02018.17 NODE_40426_length_513_cov_2.140167_g32947_i0forward_frame_1 - 0.00064 20.0 0.5 0.00099 19.4 0.5 1.3 1 0 0 1 1 1 1 Carbohydrate binding domain VPS13_mid_rpt PF16910.5 NODE_40409_length_513_cov_71.140167_g32931_i0reverse_frame_1 - 0.056 12.9 0.5 0.075 12.4 0.5 1.1 1 0 0 1 1 1 0 Repeating coiled region of VPS13 DUF3841 PF12952.7 NODE_40399_length_513_cov_89.640167_g32921_i0reverse_frame_1 - 0.041 13.7 1.3 0.047 13.5 1.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3841) DUF5560 PF17715.1 NODE_40392_length_513_cov_124.269874_g32914_i0forward_frame_1 - 0.083 12.3 7.4 0.12 11.8 7.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5560) ERGIC_N PF13850.6 NODE_40385_length_513_cov_229.395397_g2095_i1reverse_frame_1 - 0.03 14.6 0.2 0.046 14.1 0.2 1.4 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ABC_tran PF00005.27 NODE_40350_length_514_cov_3.546973_g32879_i0forward_frame_2 - 8.1e-14 52.3 0.0 8.2e-12 45.8 0.0 2.0 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 NODE_40350_length_514_cov_3.546973_g32879_i0forward_frame_2 - 8.1e-08 32.7 0.1 1.8e-07 31.6 0.1 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 NODE_40350_length_514_cov_3.546973_g32879_i0forward_frame_2 - 2e-06 27.9 0.0 2.3e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Alpha_E1_glycop PF01589.16 NODE_40343_length_514_cov_53.179541_g32873_i0reverse_frame_3 - 0.17 10.5 0.1 0.22 10.1 0.1 1.1 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein Zn_ribbon_2 PF12674.7 NODE_40342_length_514_cov_55.841336_g32872_i0reverse_frame_2 - 0.043 14.5 0.3 0.19 12.4 0.1 1.9 2 0 0 2 2 2 0 Putative zinc ribbon domain tRNA-synt_1f PF01921.18 NODE_40342_length_514_cov_55.841336_g32872_i0forward_frame_2 - 0.23 10.3 0.0 0.27 10.1 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (K) INSIG PF07281.12 NODE_40341_length_514_cov_59.407098_g32871_i0forward_frame_3 - 0.062 12.9 0.6 0.14 11.8 0.5 1.5 1 1 1 2 2 2 0 Insulin-induced protein (INSIG) Nairo_nucleo PF02477.15 NODE_40341_length_514_cov_59.407098_g32871_i0forward_frame_2 - 0.24 10.2 0.1 0.28 9.9 0.1 1.0 1 0 0 1 1 1 0 Nucleocapsid N protein RibD_C PF01872.17 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_3 - 0.095 12.5 0.3 0.13 12.1 0.3 1.1 1 0 0 1 1 1 0 RibD C-terminal domain DUF724 PF05266.14 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.0047 16.8 11.3 0.0047 16.8 11.3 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF724) ANAPC2 PF08672.11 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.043 14.3 0.2 0.11 13.0 0.2 1.7 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 MAD PF05557.13 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.09 11.1 25.2 0.11 10.9 25.2 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein GAS PF13851.6 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.13 11.6 28.3 0.78 9.1 28.2 1.9 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DIT1_PvcA PF05141.12 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.17 11.4 6.4 0.17 11.3 5.5 1.4 1 1 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein UvrD-helicase PF00580.21 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.4 10.2 15.0 0.46 10.0 15.0 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain Swi5 PF07061.11 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.4 10.8 19.0 0.22 11.6 6.9 2.9 2 1 0 2 2 2 0 Swi5 CALCOCO1 PF07888.11 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.59 8.9 21.8 0.69 8.7 21.8 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like PKcGMP_CC PF16808.5 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.76 9.7 12.3 1.8 8.5 1.0 3.5 1 1 2 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Atg14 PF10186.9 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 0.91 8.5 21.5 1.3 8.0 21.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlaC_arch PF05377.11 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 2.4 8.6 18.4 0.38 11.2 3.5 3.5 2 1 2 4 4 4 0 Flagella accessory protein C (FlaC) ADIP PF11559.8 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 2.5 8.2 30.0 0.3 11.2 22.5 2.3 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Exonuc_VII_L PF02601.15 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 2.6 7.5 15.3 3.1 7.3 15.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit kleA_kleC PF17383.2 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 2.8 8.4 5.8 4.9 7.6 1.2 2.9 1 1 2 3 3 3 0 Uncharacterized KorC regulated protein A Connexin40_C PF16791.5 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 4.1 8.7 9.1 0.58 11.5 4.4 2.0 1 1 0 2 2 2 0 Connexin 40 C-terminal domain TMF_TATA_bd PF12325.8 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 4.8 7.4 23.5 0.13 12.5 2.3 2.7 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF16 PF01519.16 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 6.4 7.3 21.3 0.55 10.7 11.1 2.6 1 1 1 2 2 2 0 Protein of unknown function DUF16 FapA PF03961.13 NODE_40316_length_514_cov_217.743215_g32847_i0reverse_frame_2 - 6.6 5.2 18.6 11 4.5 18.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A zf-C3HC4_3 PF13920.6 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 1.4e-06 28.1 17.9 9.4e-06 25.4 2.4 3.0 2 1 1 3 3 3 3 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 0.0025 17.6 16.2 0.043 13.7 4.6 3.2 3 0 0 3 3 3 2 Prokaryotic RING finger family 4 zf-LITAF-like PF10601.9 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 0.043 14.1 11.3 0.14 12.4 2.7 2.9 2 1 1 3 3 3 0 LITAF-like zinc ribbon domain zf-C3HC4 PF00097.25 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 0.086 12.7 15.9 0.072 13.0 5.6 3.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn_Tnp_IS91 PF14319.6 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 0.1 12.7 0.3 0.1 12.7 0.3 2.7 2 1 0 2 2 2 0 Transposase zinc-binding domain zf-RING_2 PF13639.6 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 0.28 11.5 19.3 0.14 12.5 1.9 2.8 2 1 1 3 3 3 0 Ring finger domain DUF1178 PF06676.11 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 0.92 9.9 5.8 9.8 6.5 0.3 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1178) Cys_rich_KTR PF14205.6 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 1.8 8.4 9.3 3.2 7.6 0.8 3.0 3 0 0 3 3 3 0 Cysteine-rich KTR YacG PF03884.14 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 2.4 8.0 11.1 2.7 7.8 0.2 3.3 3 0 0 3 3 3 0 DNA gyrase inhibitor YacG zf-RING_5 PF14634.6 NODE_40315_length_514_cov_230.966597_g32846_i0reverse_frame_2 - 4.7 7.3 17.2 0.051 13.5 7.6 2.6 2 2 0 2 2 2 0 zinc-RING finger domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks143.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks143.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks143.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks143.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:02:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TP_methylase PF00590.20 NODE_40313_length_514_cov_259.722338_g32844_i0forward_frame_2 - 5.2e-05 23.3 0.3 9.1e-05 22.5 0.1 1.5 2 0 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases AAA_7 PF12775.7 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 8.3e-26 90.6 0.2 1.2e-25 90.1 0.2 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region Dynein_AAA_lid PF17852.1 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 4.3e-15 55.9 0.1 8.3e-15 55.0 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain RsgA_GTPase PF03193.16 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 8.2e-05 22.6 0.0 9.6e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.00014 22.3 0.3 0.0018 18.7 0.1 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.00029 21.1 0.0 0.00058 20.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0019 18.2 0.0 0.003 17.5 0.0 1.3 1 0 0 1 1 1 1 NACHT domain Sigma54_activat PF00158.26 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.003 17.3 0.0 0.0042 16.8 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_25 PF13481.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0034 17.0 0.0 0.0043 16.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0042 17.1 0.0 0.0063 16.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) TsaE PF02367.17 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0053 16.8 0.0 0.0091 16.0 0.0 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0054 17.2 0.0 0.0086 16.5 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0061 15.8 0.0 0.0083 15.3 0.0 1.2 1 0 0 1 1 1 1 NB-ARC domain T2SSE PF00437.20 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0075 15.4 0.0 0.01 14.9 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein Pox_A32 PF04665.12 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.0086 15.6 0.1 0.019 14.5 0.1 1.5 1 0 0 1 1 1 1 Poxvirus A32 protein ABC_tran PF00005.27 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.01 16.3 0.3 0.096 13.2 0.1 2.1 2 0 0 2 2 2 0 ABC transporter FtsK_SpoIIIE PF01580.18 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.013 14.9 0.0 0.017 14.4 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family Roc PF08477.13 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.013 15.7 0.7 0.029 14.6 0.1 1.9 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.018 15.1 0.1 0.041 14.0 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase IstB_IS21 PF01695.17 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.023 14.4 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_23 PF13476.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.024 15.1 1.1 0.053 14.0 0.2 1.8 1 1 1 2 2 2 0 AAA domain GTP_EFTU PF00009.27 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.03 13.9 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_33 PF13671.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.039 14.1 0.1 0.13 12.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain SRPRB PF09439.10 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.059 12.8 0.4 0.48 9.8 0.2 2.3 1 1 2 3 3 3 0 Signal recognition particle receptor beta subunit MCM PF00493.23 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.066 12.3 0.0 0.091 11.8 0.0 1.2 1 0 0 1 1 1 0 MCM P-loop domain AIG1 PF04548.16 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.067 12.5 0.1 0.1 11.9 0.1 1.3 1 0 0 1 1 1 0 AIG1 family ATPase_2 PF01637.18 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.071 13.0 0.0 0.13 12.2 0.0 1.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea ResIII PF04851.15 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.075 13.0 0.2 0.13 12.2 0.2 1.6 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_29 PF13555.6 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.088 12.6 0.1 0.14 11.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF240 PF03086.14 NODE_40312_length_514_cov_264.630480_g32843_i0forward_frame_3 - 0.11 12.4 0.5 0.27 11.1 0.2 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF240) Hemopexin PF00045.19 NODE_40291_length_515_cov_2.847917_g32824_i0reverse_frame_3 - 0.066 13.2 0.5 0.12 12.3 0.5 1.4 1 0 0 1 1 1 0 Hemopexin WAK_assoc PF14380.6 NODE_40291_length_515_cov_2.847917_g32824_i0reverse_frame_2 - 0.21 12.3 2.5 0.17 12.7 0.9 1.6 2 0 0 2 2 2 0 Wall-associated receptor kinase C-terminal zf-C4pol PF14260.6 NODE_40291_length_515_cov_2.847917_g32824_i0reverse_frame_2 - 0.33 11.5 4.1 0.32 11.5 3.2 1.5 1 1 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta IPPT PF01715.17 NODE_40290_length_515_cov_4.362500_g32823_i0reverse_frame_2 - 6.1e-31 108.0 0.0 7.7e-31 107.7 0.0 1.1 1 0 0 1 1 1 1 IPP transferase DUF641 PF04859.12 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.0054 17.1 11.4 1.4 9.3 9.0 2.2 2 0 0 2 2 2 2 Plant protein of unknown function (DUF641) DUF5082 PF16888.5 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.03 14.6 17.1 0.04 14.2 0.3 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) ATG16 PF08614.11 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.7 10.1 15.0 0.36 11.0 12.0 1.8 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF4140 PF13600.6 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.74 10.3 9.0 47 4.5 9.0 2.1 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Pox_A_type_inc PF04508.12 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 0.78 9.7 7.3 0.13 12.1 1.7 2.7 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat DUF4407 PF14362.6 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 2.1 7.6 9.9 2.6 7.3 9.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SurA_N_2 PF13623.6 NODE_40283_length_515_cov_61.210417_g32816_i0reverse_frame_3 - 7.6 6.4 10.1 3.2 7.6 3.9 2.2 1 1 1 2 2 2 0 SurA N-terminal domain NST1 PF13945.6 NODE_40280_length_515_cov_66.058333_g32813_i0forward_frame_2 - 0.033 14.3 2.1 0.04 14.0 2.1 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator Fumarate_red_C PF02300.17 NODE_40276_length_515_cov_78.285417_g32809_i0reverse_frame_3 - 0.089 12.9 2.6 3.3 7.8 0.3 2.7 2 1 1 3 3 3 0 Fumarate reductase subunit C RNA_pol_Rpb1_4 PF05000.17 NODE_40275_length_515_cov_79.156250_g32808_i0reverse_frame_3 - 0.096 12.6 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 4 tRNA_SAD PF07973.14 NODE_40275_length_515_cov_79.156250_g32808_i0reverse_frame_2 - 0.58 10.3 2.7 0.91 9.7 0.1 2.4 3 0 0 3 3 3 0 Threonyl and Alanyl tRNA synthetase second additional domain Ank_5 PF13857.6 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 2.8e-12 46.6 0.1 3.8e-10 39.8 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 1e-08 35.2 0.2 2.5e-06 27.7 0.0 3.2 3 1 0 3 3 3 1 Ankyrin repeat Ank_4 PF13637.6 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 2.1e-08 34.6 0.0 0.00013 22.4 0.0 3.1 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 1.5e-06 28.7 0.0 0.0002 21.9 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_40274_length_515_cov_80.170833_g32807_i0forward_frame_2 - 0.0012 19.1 0.0 0.0075 16.7 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Chitin_synth_2 PF03142.15 NODE_40260_length_515_cov_138.641667_g32793_i0reverse_frame_2 - 1.4e-07 30.6 0.8 1.7e-07 30.3 0.8 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 NODE_40260_length_515_cov_138.641667_g32793_i0reverse_frame_2 - 3.1e-07 30.5 0.2 3.9e-07 30.2 0.2 1.1 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 NODE_40260_length_515_cov_138.641667_g32793_i0reverse_frame_2 - 0.008 16.1 0.0 0.01 15.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 OAD_gamma PF04277.13 NODE_40260_length_515_cov_138.641667_g32793_i0reverse_frame_2 - 0.2 12.3 0.3 0.36 11.5 0.3 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain ChpA-C PF03777.13 NODE_40260_length_515_cov_138.641667_g32793_i0forward_frame_3 - 0.15 11.9 0.2 0.26 11.2 0.2 1.3 1 0 0 1 1 1 0 ChpA-C TB PF00683.17 NODE_40259_length_515_cov_141.670833_g32792_i0reverse_frame_2 - 0.039 13.7 3.6 0.084 12.6 3.6 1.6 1 0 0 1 1 1 0 TB domain DUF4716 PF15837.5 NODE_40259_length_515_cov_141.670833_g32792_i0forward_frame_3 - 0.25 11.5 0.2 0.25 11.5 0.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) DUF2805 PF10985.8 NODE_40259_length_515_cov_141.670833_g32792_i0forward_frame_2 - 0.58 10.6 0.1 0.58 10.6 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2805) MR_MLE_C PF13378.6 NODE_40254_length_515_cov_170.202083_g32787_i0reverse_frame_2 - 1.9e-16 60.3 0.0 2.5e-16 59.9 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MoCF_biosynth PF00994.24 NODE_40247_length_515_cov_277.389583_g32781_i0reverse_frame_3 - 8.9e-25 87.0 0.0 1.1e-24 86.8 0.0 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain Penaeidin PF05927.11 NODE_40247_length_515_cov_277.389583_g32781_i0forward_frame_2 - 0.075 13.8 0.9 0.075 13.8 0.9 1.8 1 1 1 2 2 2 0 Penaeidin Rhodanese PF00581.20 NODE_40246_length_515_cov_290.102083_g32780_i0reverse_frame_3 - 3.7e-07 30.6 0.0 5.4e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Rhodanese-like domain ETRAMP PF09716.10 NODE_40246_length_515_cov_290.102083_g32780_i0forward_frame_3 - 0.23 11.6 0.0 0.28 11.3 0.0 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) YWFCY PF14293.6 NODE_40229_length_516_cov_2.920998_g32764_i0forward_frame_3 - 1.3 9.4 6.6 0.61 10.4 3.8 2.1 1 1 0 1 1 1 0 YWFCY protein Bax1-I PF01027.20 NODE_40221_length_516_cov_28.027027_g32756_i0forward_frame_2 - 6.1e-20 71.9 20.3 6.8e-20 71.8 20.3 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF4231 PF14015.6 NODE_40221_length_516_cov_28.027027_g32756_i0forward_frame_2 - 4.3 7.8 6.3 8.7 6.9 1.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) P34-Arc PF04045.14 NODE_40219_length_516_cov_51.719335_g32754_i0reverse_frame_3 - 0.043 13.5 0.1 0.049 13.3 0.1 1.2 1 0 0 1 1 1 0 Arp2/3 complex, 34 kD subunit p34-Arc DUF5095 PF17016.5 NODE_40219_length_516_cov_51.719335_g32754_i0forward_frame_3 - 0.015 15.0 0.1 0.015 15.0 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5095) DUF261 PF03196.13 NODE_40217_length_516_cov_71.528067_g32752_i0forward_frame_2 - 0.18 11.9 5.6 0.29 11.2 4.8 1.8 1 1 1 2 2 2 0 Protein of unknown function, DUF261 Meckelin PF09773.9 NODE_40214_length_516_cov_82.765073_g32749_i0reverse_frame_3 - 0.0021 16.2 2.0 0.0024 16.1 2.0 1.1 1 0 0 1 1 1 1 Meckelin (Transmembrane protein 67) CDC24 PF06395.11 NODE_40214_length_516_cov_82.765073_g32749_i0reverse_frame_3 - 0.028 14.7 0.2 0.071 13.4 0.2 1.7 1 0 0 1 1 1 0 CDC24 Calponin DUF4298 PF14131.6 NODE_40214_length_516_cov_82.765073_g32749_i0reverse_frame_3 - 0.048 13.6 7.7 0.091 12.7 7.5 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4298) ADIP PF11559.8 NODE_40214_length_516_cov_82.765073_g32749_i0reverse_frame_3 - 0.064 13.3 14.4 0.033 14.3 11.3 1.9 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DIMCO_N PF16844.5 NODE_40214_length_516_cov_82.765073_g32749_i0reverse_frame_3 - 0.075 13.4 0.6 0.14 12.5 0.6 1.4 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor, N-terminal DUF1474 PF07342.11 NODE_40214_length_516_cov_82.765073_g32749_i0reverse_frame_3 - 1.2 9.7 6.6 5.3 7.6 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1474) PRKG1_interact PF15898.5 NODE_40214_length_516_cov_82.765073_g32749_i0reverse_frame_3 - 1.7 9.6 18.7 2.2 9.3 13.3 2.2 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DUF1633 PF07794.11 NODE_40211_length_516_cov_91.918919_g32746_i0reverse_frame_3 - 0.042 12.0 0.0 0.047 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) DUF4637 PF15470.6 NODE_40200_length_516_cov_161.185031_g32737_i0reverse_frame_2 - 0.14 11.9 3.5 0.21 11.3 3.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF4186 PF13811.6 NODE_40200_length_516_cov_161.185031_g32737_i0forward_frame_3 - 0.058 13.4 0.9 0.084 12.9 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) Cys_rich_FGFR PF00839.17 NODE_40200_length_516_cov_161.185031_g32737_i0forward_frame_2 - 0.069 13.3 0.0 0.19 12.0 0.0 1.8 1 1 0 1 1 1 0 Cysteine rich repeat RbpA PF13397.6 NODE_40183_length_516_cov_5414.189189_g32721_i0reverse_frame_3 - 1.2 9.8 4.6 3.9 8.1 0.3 2.1 2 0 0 2 2 2 0 RNA polymerase-binding protein AAA_lid_4 PF17864.1 NODE_40183_length_516_cov_5414.189189_g32721_i0reverse_frame_2 - 0.0076 16.0 1.3 0.0085 15.8 0.4 1.6 2 0 0 2 2 2 1 RuvB AAA lid domain Acetyltransf_1 PF00583.25 ORF97664 - 4.8e-10 39.7 0.0 5.8e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF97664 - 9.1e-10 38.6 0.1 1.2e-09 38.2 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF97664 - 0.00014 22.2 0.2 0.00023 21.5 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF97664 - 0.00043 21.0 0.0 0.00055 20.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF97664 - 0.0049 16.8 0.1 0.0085 16.0 0.1 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF97664 - 0.032 14.3 0.1 0.047 13.8 0.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF97664 - 0.068 13.3 0.1 0.33 11.1 0.0 2.0 1 1 1 2 2 2 0 GCN5-related N-acetyl-transferase Ras PF00071.22 ORF97255 - 3.6e-54 182.7 0.4 4e-54 182.6 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF97255 - 6.4e-32 110.3 0.2 8.8e-32 109.9 0.2 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF97255 - 1.6e-09 37.5 0.1 1.7e-09 37.4 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF97255 - 4.8e-09 35.9 0.0 5.6e-09 35.7 0.0 1.0 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF97255 - 0.00026 20.6 0.6 0.0012 18.4 0.6 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain NTPase_1 PF03266.15 ORF97255 - 0.0015 18.5 0.2 0.002 18.1 0.2 1.3 1 0 0 1 1 1 1 NTPase RsgA_GTPase PF03193.16 ORF97255 - 0.0034 17.3 0.3 0.34 10.8 0.0 2.3 2 1 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF97255 - 0.004 17.2 0.1 0.0061 16.6 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF97255 - 0.0075 15.8 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_24 PF13479.6 ORF97255 - 0.011 15.5 0.1 0.016 15.0 0.1 1.3 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF97255 - 0.054 13.9 0.0 0.085 13.2 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain TniB PF05621.11 ORF97255 - 0.067 12.6 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein AAA_22 PF13401.6 ORF97255 - 0.11 12.8 0.1 0.18 12.1 0.1 1.4 1 0 0 1 1 1 0 AAA domain Integrase_Zn PF02022.19 ORF9560 - 0.6 10.1 5.0 5 7.2 0.4 2.5 2 0 0 2 2 2 0 Integrase Zinc binding domain PUF PF00806.19 ORF95531 - 6.9e-28 94.7 5.3 4.5e-08 32.4 0.4 4.4 4 0 0 4 4 4 4 Pumilio-family RNA binding repeat HypA PF01155.19 ORF95037 - 0.28 11.2 1.5 0.38 10.8 1.5 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EF-hand_7 PF13499.6 ORF94226 - 2.1e-07 31.3 0.0 0.018 15.5 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF94226 - 7.2e-06 26.2 0.1 0.00042 20.6 0.0 2.3 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 ORF94226 - 9.7e-06 25.3 0.1 0.33 10.8 0.0 3.7 2 1 2 4 4 4 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF94226 - 0.00094 18.6 0.2 17 5.3 0.0 4.2 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF94226 - 0.0034 17.2 1.7 11 6.3 0.0 4.3 4 1 0 4 4 4 1 EF-hand domain GPHH PF16905.5 ORF94226 - 0.095 12.5 0.0 63 3.5 0.0 3.5 4 0 0 4 4 4 0 Voltage-dependent L-type calcium channel, IQ-associated DUF4131 PF13567.6 ORF93905 - 0.036 13.7 0.0 0.051 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) CN_hydrolase PF00795.22 ORF93556 - 0.00045 19.6 0.0 0.0006 19.2 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase PsaA_PsaB PF00223.19 ORF91736 - 1.5e-18 66.5 10.6 1.3e-08 33.6 2.4 3.0 1 1 1 2 2 2 2 Photosystem I psaA/psaB protein DUF2976 PF11190.8 ORF91736 - 0.08 12.7 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) DSPc PF00782.20 ORF90726 - 0.00031 20.6 0.4 0.00044 20.1 0.4 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain CDKN3 PF05706.12 ORF90726 - 0.0016 18.1 0.0 0.0026 17.5 0.0 1.3 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase PF00102.27 ORF90726 - 0.005 16.4 0.0 0.0059 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Phage_TAC_11 PF11836.8 ORF90374 - 0.19 11.9 0.0 0.32 11.2 0.0 1.3 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 DHC_N1 PF08385.12 ORF90328 - 0.02 13.6 3.4 0.037 12.7 0.7 1.9 1 1 1 2 2 2 0 Dynein heavy chain, N-terminal region 1 Ank_2 PF12796.7 ORF90188 - 7e-27 93.8 0.1 7e-16 58.6 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF90188 - 1.4e-22 79.4 0.2 4.4e-08 33.2 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF90188 - 4.1e-20 71.3 1.9 6.5e-07 29.5 0.3 4.3 3 1 1 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF90188 - 1.3e-19 70.3 2.3 1.4e-09 38.3 0.1 3.1 1 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF90188 - 5.9e-16 57.0 0.0 0.00018 21.7 0.0 4.6 5 0 0 5 5 5 3 Ankyrin repeat Trp_Tyr_perm PF03222.13 ORF9012 - 5.7e-53 180.4 1.6 6.4e-53 180.2 1.6 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Peripla_BP_1 PF00532.21 ORF89368 - 3.5e-48 164.4 0.0 3.9e-48 164.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF89368 - 1.8e-06 27.7 0.1 2.1e-06 27.5 0.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Gtr1_RagA PF04670.12 ORF89272 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region PGA2 PF07543.12 ORF89034 - 0.051 13.6 0.0 0.081 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein trafficking PGA2 PDCD2_C PF04194.13 ORF88397 - 2.5e-28 99.3 0.3 2.5e-28 99.3 0.3 1.3 2 0 0 2 2 2 1 Programmed cell death protein 2, C-terminal putative domain DDDD PF10161.9 ORF88270 - 0.12 12.1 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Putative mitochondrial precursor protein Kinocilin PF15033.6 ORF87146 - 0.078 12.6 0.2 4.2 7.0 0.0 2.1 2 0 0 2 2 2 0 Kinocilin protein SHIPPO-rpt PF07004.12 ORF86577 - 9.1e-08 32.7 5.1 0.011 16.7 0.0 3.5 3 0 0 3 3 3 3 Sperm-tail PG-rich repeat TRAP_alpha PF03896.16 ORF86003 - 0.028 13.6 1.7 0.035 13.3 1.7 1.2 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit NOA36 PF06524.12 ORF86003 - 0.46 9.8 6.3 0.65 9.3 6.3 1.2 1 0 0 1 1 1 0 NOA36 protein ALMT PF11744.8 ORF86003 - 0.75 8.6 3.4 0.81 8.4 3.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter CENP-B_dimeris PF09026.10 ORF86003 - 2.7 8.4 9.3 1.8 9.0 4.6 2.3 2 0 0 2 2 2 0 Centromere protein B dimerisation domain DUF1180 PF06679.12 ORF84723 - 0.15 12.5 0.7 0.19 12.1 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) ECSCR PF15820.5 ORF84170 - 0.0011 18.8 0.3 0.0019 18.0 0.3 1.3 1 0 0 1 1 1 1 Endothelial cell-specific chemotaxis regulator TRP PF06011.12 ORF84170 - 0.021 13.5 6.3 0.024 13.4 6.3 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Cadherin_C_2 PF16492.5 ORF84170 - 0.078 13.7 0.1 0.13 13.0 0.1 1.4 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal OPA3 PF07047.12 ORF83838 - 1.5e-17 63.5 0.1 3.9e-17 62.2 0.0 1.6 1 1 1 2 2 2 1 Optic atrophy 3 protein (OPA3) HMMR_N PF15905.5 ORF83838 - 0.012 15.1 3.1 0.015 14.8 2.7 1.4 2 0 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal Prefoldin_2 PF01920.20 ORF83838 - 0.013 15.5 1.9 0.017 15.1 1.3 1.6 1 1 0 1 1 1 0 Prefoldin subunit IZUMO PF15005.6 ORF83838 - 0.015 15.9 0.2 0.027 15.0 0.2 1.4 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated SlyX PF04102.12 ORF83838 - 0.037 14.7 0.5 0.063 13.9 0.5 1.4 1 0 0 1 1 1 0 SlyX Fib_alpha PF08702.10 ORF83838 - 0.33 11.1 3.2 0.58 10.3 3.2 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family CCSAP PF15748.5 ORF83023 - 2.4 8.2 4.0 3.4 7.8 4.0 1.1 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated RCC1_2 PF13540.6 ORF80991 - 2.2e-09 36.8 6.1 0.066 13.0 0.1 4.3 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF80991 - 0.0025 18.1 0.0 1.6 9.1 0.0 2.5 2 1 1 3 3 3 2 TFIIH p62 subunit, N-terminal domain DUF155 PF02582.14 ORF80991 - 0.025 14.7 0.0 24 5.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 TruB_C PF09142.11 ORF80991 - 0.03 14.1 3.8 0.1 12.4 0.0 3.0 3 1 0 3 3 3 0 tRNA Pseudouridine synthase II, C terminal PheRS_DBD2 PF18554.1 ORF80991 - 0.6 10.1 4.5 8.7 6.4 0.3 2.5 2 0 0 2 2 2 0 PheRS DNA binding domain 2 YojJ PF10372.9 ORF79310 - 0.014 15.5 4.1 0.12 12.5 0.1 2.5 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Cnn_1N PF07989.11 ORF79310 - 0.038 14.2 2.2 0.038 14.2 2.2 3.2 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 CdvA PF18822.1 ORF79310 - 0.046 13.5 14.8 0.33 10.8 1.1 2.4 2 1 0 2 2 2 0 CdvA-like coiled-coil domain Peptidase_M75 PF09375.10 ORF79310 - 0.069 12.6 0.6 0.081 12.4 0.6 1.1 1 0 0 1 1 1 0 Imelysin CHDCT2 PF08074.11 ORF79310 - 0.11 12.6 5.5 0.28 11.3 5.5 1.7 1 1 0 1 1 1 0 CHDCT2 (NUC038) domain SseC PF04888.12 ORF79310 - 0.13 11.8 0.3 0.13 11.8 0.3 1.9 2 0 0 2 2 2 0 Secretion system effector C (SseC) like family SOGA PF11365.8 ORF79310 - 2.6 9.2 11.7 0.9 10.7 5.2 2.8 1 1 1 2 2 2 0 Protein SOGA Cep57_CLD_2 PF14197.6 ORF79310 - 3.3 7.9 17.2 1.6 8.9 8.1 2.8 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 Ly49 PF08391.10 ORF79310 - 8.4 6.8 9.8 2.4 8.6 5.9 2.1 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region bZIP_1 PF00170.21 ORF79310 - 9.4 6.4 18.7 0.64 10.2 0.4 3.6 2 1 2 4 4 4 0 bZIP transcription factor Ku_C PF03730.14 ORF79310 - 10 6.9 9.3 3.9 8.2 1.6 2.5 1 1 1 2 2 2 0 Ku70/Ku80 C-terminal arm HemX PF04375.14 ORF77178 - 0.0011 18.4 3.6 0.0013 18.1 3.1 1.3 1 1 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase DUF5082 PF16888.5 ORF77178 - 0.0066 16.7 3.9 0.0066 16.7 3.9 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF5082) FDX-ACB PF03147.14 ORF77178 - 0.031 14.7 1.5 0.062 13.7 1.3 1.6 1 1 1 2 2 2 0 Ferredoxin-fold anticodon binding domain Exonuc_VII_L PF02601.15 ORF77178 - 0.048 13.2 8.8 0.06 12.9 8.8 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Apolipoprotein PF01442.18 ORF77178 - 0.14 12.0 6.5 0.33 10.8 6.5 1.6 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF1640 PF07798.11 ORF77178 - 0.15 12.1 11.8 0.24 11.4 11.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) FlaC_arch PF05377.11 ORF77178 - 0.74 10.2 9.6 0.12 12.8 1.3 2.9 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) DUF745 PF05335.13 ORF77178 - 0.97 9.1 5.3 0.68 9.6 3.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 ORF77178 - 1.5 8.8 7.7 1.6 8.8 4.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) SlyX PF04102.12 ORF77178 - 2.5 8.8 8.6 2 9.1 4.4 2.5 2 1 0 2 2 2 0 SlyX DUF641 PF04859.12 ORF77178 - 6.9 7.0 9.8 2.2 8.6 4.6 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Zn-ribbon_8 PF09723.10 ORF75466 - 0.092 12.9 0.6 0.092 12.9 0.6 3.7 2 1 2 4 4 4 0 Zinc ribbon domain LysR_substrate PF03466.20 ORF73975 - 2e-15 56.7 0.0 2.4e-15 56.5 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain VSG_B PF13206.6 ORF73054 - 0.69 9.1 7.2 1 8.5 7.2 1.4 1 0 0 1 1 1 0 Trypanosomal VSG domain NS3_envE PF02723.14 ORF72973 - 0.0085 16.1 0.9 0.0085 16.1 0.9 2.0 2 0 0 2 2 2 1 Non-structural protein NS3/Small envelope protein E ECSCR PF15820.5 ORF72973 - 0.011 15.5 0.1 0.019 14.8 0.1 1.4 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator TRP PF06011.12 ORF72973 - 0.13 11.0 7.7 0.15 10.8 7.7 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel ODC_AZ PF02100.17 ORF71971 - 0.67 10.0 3.9 2.5 8.1 0.1 2.5 2 1 1 3 3 3 0 Ornithine decarboxylase antizyme MORN PF02493.20 ORF7060 - 8.3e-08 31.7 14.8 3e-06 26.8 3.2 4.6 4 1 0 4 4 4 4 MORN repeat S-AdoMet_synt_M PF02772.16 ORF70570 - 0.052 13.8 0.0 2.1 8.6 0.0 2.0 2 0 0 2 2 2 0 S-adenosylmethionine synthetase, central domain DIT1_PvcA PF05141.12 ORF69966 - 0.013 15.0 1.2 0.018 14.5 1.2 1.2 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein EMC3_TMCO1 PF01956.16 ORF69966 - 0.36 10.5 1.3 0.6 9.8 1.3 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Gtr1_RagA PF04670.12 ORF68590 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF5056 PF16479.5 ORF67643 - 1.7 8.9 4.3 1.9 8.8 0.1 2.6 2 1 0 3 3 3 0 Domain of unknown function (DUF5056) DUF4710 PF15828.5 ORF66395 - 0.049 13.7 0.0 0.075 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) WASH-7_C PF14746.6 ORF66276 - 0.1 12.3 0.0 0.28 10.9 0.0 1.6 2 0 0 2 2 2 0 WASH complex subunit 7, C-terminal DDDD PF10161.9 ORF62622 - 0.08 12.7 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 Putative mitochondrial precursor protein BT1 PF03092.16 ORF59948 - 1.4e-18 66.4 0.2 1.7e-18 66.2 0.2 1.0 1 0 0 1 1 1 1 BT1 family MFS_1 PF07690.16 ORF59948 - 0.0071 15.3 0.0 0.0071 15.3 0.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Gtr1_RagA PF04670.12 ORF58756 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Croc_4 PF17691.1 ORF57367 - 5.4 7.1 9.2 2.1 8.4 2.4 2.3 1 1 1 2 2 2 0 Contingent replication of cDNA 4 Pkinase PF00069.25 ORF56953 - 0.00039 19.9 0.3 0.00067 19.1 0.1 1.5 2 0 0 2 2 2 1 Protein kinase domain DUF4407 PF14362.6 ORF55097 - 0.0019 17.6 12.7 0.0025 17.2 12.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) DUF496 PF04363.12 ORF55097 - 0.0095 16.0 5.8 0.0095 16.0 5.8 2.4 1 1 1 2 2 2 1 Protein of unknown function (DUF496) DUF3584 PF12128.8 ORF55097 - 0.012 13.1 18.2 0.015 12.8 18.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) FAM76 PF16046.5 ORF55097 - 0.067 12.5 19.3 0.11 11.9 19.3 1.4 1 1 0 1 1 1 0 FAM76 protein ApoLp-III PF07464.11 ORF55097 - 0.15 12.2 13.8 0.32 11.1 4.1 2.1 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Lebercilin PF15619.6 ORF55097 - 0.22 11.2 21.9 2.2 7.9 21.3 2.3 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease PilO PF04350.13 ORF55097 - 0.22 11.7 10.7 0.61 10.2 2.2 2.4 2 0 0 2 2 2 0 Pilus assembly protein, PilO BRE1 PF08647.11 ORF55097 - 0.35 11.0 26.7 0.18 11.9 2.0 3.1 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase DUF948 PF06103.11 ORF55097 - 0.45 10.8 7.8 4.9 7.5 1.5 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Jnk-SapK_ap_N PF09744.9 ORF55097 - 0.59 10.4 24.0 0.15 12.3 10.4 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Spc7 PF08317.11 ORF55097 - 0.63 8.9 22.7 0.4 9.5 8.6 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein Baculo_PEP_C PF04513.12 ORF55097 - 0.77 9.8 8.2 3.7 7.6 1.2 2.6 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus BAF1_ABF1 PF04684.13 ORF55097 - 0.88 8.6 16.8 0.96 8.4 16.8 1.0 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor Cob_adeno_trans PF01923.18 ORF55097 - 1.6 8.9 6.1 3.5 7.7 6.1 1.7 1 1 0 1 1 1 0 Cobalamin adenosyltransferase TPR_MLP1_2 PF07926.12 ORF55097 - 1.7 8.7 21.3 0.77 9.8 5.4 2.5 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein MnmE_helical PF12631.7 ORF55097 - 2 8.5 10.7 1.3 9.2 8.4 1.8 1 1 0 1 1 1 0 MnmE helical domain DUF1943 PF09172.11 ORF55097 - 2.2 7.4 8.9 2.6 7.2 8.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) DUF4200 PF13863.6 ORF55097 - 2.5 8.5 27.7 5.5 7.4 13.6 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) PhoU PF01895.19 ORF55097 - 3 8.3 16.4 1.7 9.2 2.2 3.2 1 1 3 4 4 4 0 PhoU domain DLP_helical PF18709.1 ORF55097 - 3.9 6.6 17.8 16 4.5 17.8 1.8 1 1 0 1 1 1 0 Dynamin-like helical domain Atg14 PF10186.9 ORF55097 - 4.1 6.4 19.7 2.2 7.3 6.5 2.0 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Plk4_PB2 PF18409.1 ORF55097 - 4.3 8.1 8.1 1.9 9.2 1.7 2.2 1 1 1 2 2 2 0 Polo-like Kinase 4 Polo Box 2 DivIC PF04977.15 ORF55097 - 4.4 7.1 26.6 4.3 7.2 4.4 3.8 1 1 2 3 3 3 0 Septum formation initiator DUF16 PF01519.16 ORF55097 - 4.6 7.8 23.7 0.47 11.0 15.0 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 LPP PF04728.13 ORF55097 - 4.6 7.7 15.7 0.2 12.1 0.9 3.7 2 1 1 3 3 3 0 Lipoprotein leucine-zipper GLTP PF08718.11 ORF55097 - 4.9 7.4 7.3 0.79 10.0 3.3 1.8 2 1 0 2 2 1 0 Glycolipid transfer protein (GLTP) SlyX PF04102.12 ORF55097 - 6.8 7.4 22.1 4.2 8.1 7.6 3.7 1 1 2 3 3 3 0 SlyX TMF_DNA_bd PF12329.8 ORF55097 - 7.9 6.6 24.1 0.73 9.9 0.8 3.5 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding TMPIT PF07851.13 ORF55097 - 8.3 5.5 19.6 0.44 9.7 7.4 2.0 1 1 1 2 2 2 0 TMPIT-like protein UAA PF08449.11 ORF54440 - 2.1e-22 79.7 10.2 2.3e-22 79.6 10.2 1.0 1 0 0 1 1 1 1 UAA transporter family CobD_Cbib PF03186.13 ORF54440 - 1 8.5 5.1 2.2 7.4 5.1 1.5 1 1 1 2 2 2 0 CobD/Cbib protein 2-oxoacid_dh PF00198.23 ORF54060 - 3e-62 210.1 0.1 3.3e-62 210.0 0.1 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tenui_N PF05733.11 ORF53156 - 0.0035 16.9 0.5 0.0045 16.5 0.5 1.1 1 0 0 1 1 1 1 Tenuivirus/Phlebovirus nucleocapsid protein SIT PF15330.6 ORF53156 - 0.028 14.8 0.2 0.047 14.1 0.2 1.5 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT TMEM18 PF14770.6 ORF53156 - 1.6 8.8 4.1 0.97 9.4 0.7 2.1 1 1 0 2 2 2 0 Transmembrane protein 18 SFTA2 PF15210.6 ORF53141 - 0.067 13.1 0.2 0.16 11.9 0.2 1.7 1 0 0 1 1 1 0 Surfactant-associated protein 2 Ski_Sno PF02437.17 ORF51717 - 0.1 12.3 0.0 0.25 11.1 0.0 1.5 1 1 0 1 1 1 0 SKI/SNO/DAC family FUR PF01475.19 ORF51428 - 2.8e-15 56.5 0.1 6.4e-15 55.3 0.0 1.6 1 1 1 2 2 2 1 Ferric uptake regulator family HTH_5 PF01022.20 ORF51428 - 0.051 13.5 0.1 0.83 9.6 0.1 2.6 1 1 0 1 1 1 0 Bacterial regulatory protein, arsR family PadR PF03551.14 ORF51428 - 0.057 13.4 0.0 0.15 12.1 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family TrmB PF01978.19 ORF51428 - 0.076 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 ORF51428 - 0.09 13.1 0.0 0.13 12.7 0.0 1.4 1 1 0 1 1 1 0 Penicillinase repressor MarR PF01047.22 ORF51428 - 0.15 12.0 0.0 0.57 10.1 0.0 2.1 1 1 0 1 1 1 0 MarR family Cpn60_TCP1 PF00118.24 ORF47890 - 1.2e-12 47.3 0.0 1.5e-12 46.9 0.0 1.1 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family NPP PF08384.10 ORF4654 - 0.027 14.5 0.9 1.1 9.3 0.5 2.7 2 0 0 2 2 2 0 Pro-opiomelanocortin, N-terminal region Peptidase_M24 PF00557.24 ORF42633 - 1.6e-06 27.9 0.0 2.1e-06 27.6 0.0 1.2 1 1 0 1 1 1 1 Metallopeptidase family M24 GARS_A PF01071.19 ORF42633 - 0.05 13.4 0.0 0.066 13.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AtpR PF12966.7 ORF4261 - 3.3 8.2 8.5 2.2 8.8 5.7 1.8 1 1 1 2 2 2 0 N-ATPase, AtpR subunit AAA_lid_7 PF17867.1 ORF41753 - 0.059 13.6 0.1 0.093 12.9 0.1 1.4 1 0 0 1 1 1 0 Midasin AAA lid domain BatD PF13584.6 ORF4112 - 0.014 14.3 0.1 0.015 14.1 0.1 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF3586 PF12131.8 ORF4112 - 0.21 11.9 5.5 0.2 11.9 4.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3586) Metallothio_11 PF02066.15 ORF40522 - 0.018 15.2 3.6 0.45 10.8 1.4 2.6 2 1 0 2 2 2 0 Metallothionein family 11 DUF4668 PF15701.5 ORF38636 - 0.13 12.1 1.6 0.17 11.7 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) NIF PF03031.18 ORF38474 - 6.1e-48 162.5 0.3 6.9e-48 162.4 0.3 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Gtr1_RagA PF04670.12 ORF34495 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF588 PF04535.12 ORF33697 - 0.0028 17.5 1.2 0.0039 17.0 1.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF588) DUF4405 PF14358.6 ORF33697 - 0.048 14.2 0.6 0.16 12.6 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) LCE6A PF15858.5 ORF32436 - 0.38 11.5 3.7 0.72 10.6 3.7 1.5 1 1 0 1 1 1 0 Late cornified envelope protein 6A family PdxJ PF03740.13 ORF31765 - 1.2e-69 234.0 2.1 1.3e-69 233.9 2.1 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthesis protein PdxJ AP_endonuc_2 PF01261.24 ORF31765 - 0.0027 17.2 1.3 0.0095 15.4 1.3 2.1 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel Wzy_C PF04932.15 ORF30414 - 8.1 6.1 9.5 12 5.5 9.5 1.2 1 0 0 1 1 1 0 O-Antigen ligase CASP_C PF08172.12 ORF30187 - 0.004 16.5 2.9 0.004 16.5 2.9 1.8 1 1 0 1 1 1 1 CASP C terminal Pox_A_type_inc PF04508.12 ORF30187 - 0.0088 15.9 0.5 0.0088 15.9 0.5 2.8 3 0 0 3 3 3 1 Viral A-type inclusion protein repeat HALZ PF02183.18 ORF30187 - 0.017 15.4 9.4 0.29 11.4 0.9 3.2 3 0 0 3 3 3 0 Homeobox associated leucine zipper DUF4145 PF13643.6 ORF30187 - 0.13 12.4 4.3 1.5 9.0 0.5 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4145) TolA_bind_tri PF16331.5 ORF30187 - 0.4 10.8 6.7 0.2 11.7 4.5 1.7 2 0 0 2 2 2 0 TolA binding protein trimerisation Tho2 PF11262.8 ORF30187 - 0.47 9.6 12.1 0.66 9.1 11.3 1.7 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 COG5 PF10392.9 ORF30187 - 0.84 9.8 9.1 0.91 9.7 7.0 1.9 2 0 0 2 2 2 0 Golgi transport complex subunit 5 Prefoldin PF02996.17 ORF30187 - 0.96 9.4 7.4 1.2 9.0 1.3 2.4 2 0 0 2 2 2 0 Prefoldin subunit Rho_Binding PF08912.11 ORF30187 - 1.3 9.9 14.0 0.43 11.4 1.3 2.7 3 0 0 3 3 2 0 Rho Binding FapA PF03961.13 ORF30187 - 2.2 6.8 9.2 3.1 6.3 9.2 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DivIC PF04977.15 ORF30187 - 2.3 8.0 11.0 0.22 11.3 1.3 2.6 2 1 0 3 3 3 0 Septum formation initiator Atg14 PF10186.9 ORF30187 - 4.2 6.4 14.0 3.1 6.8 12.6 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlaC_arch PF05377.11 ORF30187 - 4.4 7.8 11.9 0.27 11.7 1.3 3.2 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) XhlA PF10779.9 ORF30187 - 5.4 7.3 9.8 0.67 10.2 2.1 2.8 3 0 0 3 3 3 0 Haemolysin XhlA DMPK_coil PF08826.10 ORF30187 - 6.8 6.9 9.2 5.4 7.2 5.0 2.7 2 1 1 3 3 3 0 DMPK coiled coil domain like bZIP_1 PF00170.21 ORF30187 - 6.9 6.9 18.0 0.13 12.4 7.8 2.7 2 1 1 3 3 3 0 bZIP transcription factor PsaA_PsaB PF00223.19 ORF28757 - 1.5e-18 66.5 10.6 1.3e-08 33.6 2.4 3.0 1 1 1 2 2 2 2 Photosystem I psaA/psaB protein DUF2976 PF11190.8 ORF28757 - 0.08 12.7 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) ResB PF05140.14 ORF27528 - 2.1 7.0 3.6 3.2 6.4 3.6 1.2 1 0 0 1 1 1 0 ResB-like family Gtr1_RagA PF04670.12 ORF27361 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Phage_TAC_11 PF11836.8 ORF2718 - 0.19 11.9 0.0 0.32 11.2 0.0 1.3 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 Ion_trans_N PF08412.10 ORF26905 - 0.18 11.5 0.0 0.28 10.8 0.0 1.3 1 0 0 1 1 1 0 Ion transport protein N-terminal SUR7 PF06687.12 ORF26800 - 3.6 7.2 16.6 1.9 8.0 14.8 1.4 2 0 0 2 2 2 0 SUR7/PalI family zinc_ribbon_11 PF11682.8 ORF26274 - 8e-19 67.9 0.4 1.3e-18 67.3 0.4 1.3 1 0 0 1 1 1 1 Probable zinc-ribbon DZR PF12773.7 ORF26274 - 0.078 13.0 13.3 0.54 10.3 4.7 3.1 3 0 0 3 3 3 0 Double zinc ribbon zinc-ribbon_6 PF10005.9 ORF26274 - 0.41 11.4 13.7 1.9 9.3 0.0 3.1 2 1 0 3 3 3 0 zinc-ribbon domain DUF4379 PF14311.6 ORF26274 - 0.43 11.0 11.5 0.25 11.7 0.8 3.3 3 0 0 3 3 3 0 Probable Zinc-ribbon domain zinc-ribbons_6 PF07191.12 ORF26274 - 2.1 8.4 14.7 0.19 11.7 3.8 3.3 2 1 1 3 3 3 0 zinc-ribbons Zn_ribbon_2 PF12674.7 ORF26274 - 4.2 8.1 8.3 3.6 8.3 5.2 2.5 2 1 0 2 2 2 0 Putative zinc ribbon domain HypA PF01155.19 ORF26274 - 4.8 7.2 10.1 2.1 8.4 4.1 2.6 1 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EF-hand_1 PF00036.32 ORF25957 - 2.2e-14 51.8 0.8 0.00074 18.9 0.0 5.1 4 1 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF25957 - 2.2e-13 49.0 0.1 0.017 15.0 0.0 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF25957 - 1.1e-10 41.8 1.6 3.6e-05 24.1 0.5 2.9 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF25957 - 2.1e-07 30.1 2.7 0.051 13.1 0.0 5.0 5 0 0 5 5 5 2 EF hand EF-hand_8 PF13833.6 ORF25957 - 4e-06 26.6 0.2 0.071 13.0 0.1 3.6 3 1 0 3 3 3 2 EF-hand domain pair KRAB PF01352.27 ORF25957 - 0.43 10.3 0.1 0.43 10.3 0.1 2.7 3 0 0 3 3 3 0 KRAB box DUF3377 PF11857.8 ORF2379 - 1.4 8.9 10.9 0.062 13.2 4.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) Pkinase PF00069.25 ORF22631 - 0.00039 19.9 0.3 0.00067 19.1 0.1 1.5 2 0 0 2 2 2 1 Protein kinase domain Oleosin PF01277.17 ORF22472 - 0.0034 17.1 0.2 0.0045 16.7 0.2 1.2 1 0 0 1 1 1 1 Oleosin Nudc_N PF14050.6 ORF20812 - 0.17 11.9 0.0 0.39 10.7 0.0 1.5 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. DNA_binding_1 PF01035.20 ORF20138 - 2.9e-35 120.3 0.1 3.9e-35 119.8 0.1 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 ORF20138 - 3.4e-19 69.4 0.0 4.6e-19 69.0 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CBP_BcsS PF17036.5 ORF19818 - 0.11 12.5 0.1 3.1 7.7 0.0 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsS Rubella_Capsid PF05750.11 ORF18730 - 0.47 10.0 8.9 3.7 7.1 5.5 2.1 1 1 1 2 2 2 0 Rubella capsid protein Peptidase_A21 PF03566.13 ORF18649 - 3.9 5.6 5.2 4.6 5.4 5.2 1.1 1 0 0 1 1 1 0 Peptidase family A21 Gtr1_RagA PF04670.12 ORF17327 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Spc7 PF08317.11 ORF16533 - 0.003 16.5 9.6 0.003 16.5 9.6 1.4 1 1 0 1 1 1 1 Spc7 kinetochore protein HMMR_N PF15905.5 ORF16533 - 0.044 13.2 8.1 0.052 13.0 8.1 1.2 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF724 PF05266.14 ORF16533 - 0.19 11.5 7.0 0.26 11.1 7.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Tup_N PF08581.10 ORF16533 - 0.26 11.6 9.6 2.6 8.4 3.1 2.4 1 1 1 2 2 2 0 Tup N-terminal JIP_LZII PF16471.5 ORF16533 - 0.72 10.1 9.3 1 9.6 0.8 2.8 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II THOC7 PF05615.13 ORF16533 - 0.85 9.9 9.1 0.83 9.9 7.7 1.7 1 1 0 1 1 1 0 Tho complex subunit 7 Laminin_II PF06009.12 ORF16533 - 1.5 8.8 8.9 1.9 8.5 8.0 1.6 1 1 1 2 2 2 0 Laminin Domain II TMF_TATA_bd PF12325.8 ORF16533 - 2.7 8.2 11.2 0.67 10.2 3.0 2.4 2 1 1 3 3 3 0 TATA element modulatory factor 1 TATA binding AAA_lid_3 PF17862.1 ORF1572 - 0.002 17.9 0.4 0.0038 17.0 0.4 1.4 1 0 0 1 1 1 1 AAA+ lid domain EF-hand_6 PF13405.6 ORF1554 - 5.4e-20 69.6 9.8 2.7e-08 33.1 0.2 4.3 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF1554 - 1.2e-19 70.5 10.0 1.2e-11 44.9 3.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF1554 - 4e-19 66.7 16.7 1.6e-08 33.5 0.2 4.4 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF1554 - 1.1e-12 47.5 16.4 3.6e-07 29.9 1.3 5.0 3 2 2 5 5 5 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF1554 - 1.1e-10 41.7 0.8 4.1e-06 27.0 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF1554 - 3.4e-05 23.1 13.1 9.1e-05 21.8 0.4 4.3 4 0 0 4 4 4 1 EF hand DUF3349 PF11829.8 ORF1554 - 0.0048 17.6 0.4 0.33 11.7 0.1 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF3349) EF-hand_14 PF17959.1 ORF1554 - 0.0065 16.8 2.2 2.6 8.4 0.1 2.6 2 1 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF1554 - 0.0079 16.1 8.0 2.1 8.3 0.2 3.2 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF1554 - 0.024 14.6 0.3 4.3 7.2 0.0 2.8 1 1 2 3 3 3 0 Caleosin related protein FGAR-AT_linker PF18072.1 ORF1554 - 0.044 14.3 1.5 4.1 8.0 0.1 3.3 2 1 2 4 4 4 0 Formylglycinamide ribonucleotide amidotransferase linker domain ADSL_C PF10397.9 ORF1554 - 1 10.0 2.9 41 4.8 0.0 3.2 3 1 0 3 3 3 0 Adenylosuccinate lyase C-terminus TetR_C_13 PF16925.5 ORF151702 - 7.3e-11 42.0 0.2 1.4e-10 41.1 0.1 1.5 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 ORF151702 - 1.6e-06 27.8 0.0 2.6e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.6 ORF151702 - 0.026 14.7 0.4 0.25 11.6 0.0 2.0 2 0 0 2 2 2 0 BetI-type transcriptional repressor, C-terminal SPOC PF07744.13 ORF151702 - 0.073 13.0 0.0 0.37 10.7 0.0 2.0 2 1 0 2 2 2 0 SPOC domain Peptidase_A4 PF01828.17 ORF151340 - 0.056 12.9 0.3 0.07 12.6 0.3 1.1 1 0 0 1 1 1 0 Peptidase A4 family RBR PF17208.3 ORF151023 - 0.03 15.0 13.4 0.03 15.0 13.4 1.9 1 1 1 2 2 2 0 RNA binding Region Pex2_Pex12 PF04757.14 ORF150352 - 0.068 12.8 0.3 2.4 7.7 0.1 2.1 2 0 0 2 2 2 0 Pex2 / Pex12 amino terminal region DUF3377 PF11857.8 ORF149915 - 1.4 8.9 10.9 0.062 13.2 4.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) HXXEE PF13787.6 ORF149682 - 0.022 15.6 0.7 27 5.6 0.0 3.2 3 1 1 4 4 4 0 Protein of unknown function with HXXEE motif dUTPase PF00692.19 ORF149682 - 0.042 13.5 0.6 4.7 6.9 0.1 2.5 1 1 2 3 3 3 0 dUTPase Gtr1_RagA PF04670.12 ORF148989 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Snf7 PF03357.21 ORF148762 - 0.0032 17.1 2.0 0.0032 17.1 1.1 1.5 1 1 0 1 1 1 1 Snf7 C1_1 PF00130.22 ORF147321 - 0.23 11.3 4.3 1.2 9.1 0.3 2.8 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) EF-hand_1 PF00036.32 ORF145914 - 1.9e-26 89.6 12.3 2.2e-06 26.8 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF145914 - 9.5e-23 80.5 4.3 1.1e-13 51.4 0.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF145914 - 5.8e-20 69.5 7.1 1.3e-05 24.7 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF145914 - 2.1e-19 68.1 12.9 8.9e-05 21.8 0.2 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF145914 - 6.3e-10 38.8 10.4 2.1e-05 24.3 2.5 4.3 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF145914 - 1.3e-09 38.3 0.4 0.00025 21.3 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF145914 - 1.3e-05 25.1 5.6 0.035 14.0 0.9 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF145914 - 0.0059 16.9 0.1 0.086 13.2 0.1 2.6 2 1 1 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF145914 - 0.016 15.1 1.1 7.1 6.5 0.0 3.6 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF145914 - 0.022 15.0 4.5 9.6 6.5 4.2 3.2 2 1 0 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF145914 - 0.033 14.3 0.0 4.5 7.6 0.0 3.5 3 1 1 4 4 4 0 Pseudomurein-binding repeat Hydrolase_like PF13242.6 ORF145032 - 1.2e-18 66.9 0.0 1.8e-18 66.4 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 ORF145032 - 0.00021 21.7 0.0 0.00027 21.3 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 ORF145032 - 0.00063 19.4 0.0 0.00093 18.9 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial PGP phosphatase NFACT-C PF11923.8 ORF144772 - 0.17 11.9 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 NFACT protein C-terminal domain EF-hand_6 PF13405.6 ORF144430 - 5.4e-20 69.6 9.8 2.7e-08 33.1 0.2 4.3 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF144430 - 1.2e-19 70.5 10.0 1.2e-11 44.9 3.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF144430 - 4e-19 66.7 16.7 1.6e-08 33.5 0.2 4.4 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF144430 - 1.1e-12 47.5 16.4 3.6e-07 29.9 1.3 5.0 3 2 2 5 5 5 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF144430 - 1.1e-10 41.7 0.8 4.1e-06 27.0 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF144430 - 3.4e-05 23.1 13.1 9.1e-05 21.8 0.4 4.3 4 0 0 4 4 4 1 EF hand DUF3349 PF11829.8 ORF144430 - 0.0048 17.6 0.4 0.33 11.7 0.1 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF3349) EF-hand_14 PF17959.1 ORF144430 - 0.0065 16.8 2.2 2.6 8.4 0.1 2.6 2 1 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF144430 - 0.0079 16.1 8.0 2.1 8.3 0.2 3.2 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF144430 - 0.024 14.6 0.3 4.3 7.2 0.0 2.8 1 1 2 3 3 3 0 Caleosin related protein FGAR-AT_linker PF18072.1 ORF144430 - 0.044 14.3 1.5 4.1 8.0 0.1 3.3 2 1 2 4 4 4 0 Formylglycinamide ribonucleotide amidotransferase linker domain ADSL_C PF10397.9 ORF144430 - 1 10.0 2.9 41 4.8 0.0 3.2 3 1 0 3 3 3 0 Adenylosuccinate lyase C-terminus DUF4623 PF15416.6 ORF143367 - 0.04 12.5 0.3 0.056 12.0 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4623) HTH_54 PF18607.1 ORF143367 - 0.053 13.6 0.3 0.16 12.1 0.1 1.8 1 1 0 1 1 1 0 ParA helix turn helix domain Gtr1_RagA PF04670.12 ORF142500 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Fer2 PF00111.27 ORF140266 - 1.7e-12 47.1 2.8 2.7e-12 46.5 2.8 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 ORF140266 - 0.2 11.7 1.7 2.2 8.4 1.9 2.4 2 1 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain FapA PF03961.13 ORF139605 - 0.08 11.5 6.1 0.088 11.4 6.1 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Sec20 PF03908.13 ORF139605 - 0.17 11.8 2.0 0.28 11.1 0.1 2.2 2 1 0 2 2 2 0 Sec20 BNIP3 PF06553.12 ORF136568 - 0.11 12.1 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 BNIP3 zf-RING_2 PF13639.6 ORF134118 - 4.9e-11 42.8 7.8 8.2e-11 42.1 7.8 1.4 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF134118 - 1.8e-08 34.5 5.7 3.4e-08 33.7 5.7 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF134118 - 1.5e-07 31.2 7.1 3.1e-07 30.1 7.1 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF134118 - 3.6e-06 26.8 5.8 6.3e-06 26.1 5.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF134118 - 1.9e-05 24.4 5.7 2.8e-05 23.9 5.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF134118 - 4.2e-05 23.2 3.9 4.2e-05 23.2 3.9 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF134118 - 0.0001 22.1 6.9 0.0001 22.1 6.9 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF134118 - 0.00013 21.9 2.1 0.0002 21.3 2.1 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF134118 - 0.00027 20.9 1.6 0.00036 20.5 0.4 1.9 1 1 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF134118 - 0.0045 16.8 4.5 0.018 14.9 4.5 2.0 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 Baculo_RING PF05883.11 ORF134118 - 0.0082 16.1 0.9 0.012 15.5 0.9 1.3 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain RINGv PF12906.7 ORF134118 - 0.014 15.5 8.3 0.031 14.4 8.3 1.6 1 0 0 1 1 1 0 RING-variant domain Zn_ribbon_17 PF17120.5 ORF134118 - 0.014 15.0 5.2 0.026 14.2 5.2 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-TFIIIC PF12660.7 ORF134118 - 0.025 14.5 1.3 0.039 13.9 1.3 1.4 1 0 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex Gmx_para_CXXCG PF09535.10 ORF134118 - 0.14 11.4 0.1 0.18 11.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) FANCL_C PF11793.8 ORF134118 - 0.15 12.2 6.3 0.56 10.4 6.3 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain DUF3484 PF11983.8 ORF134039 - 0.00067 20.7 1.9 0.0015 19.6 1.9 1.6 1 0 0 1 1 1 1 Membrane-attachment and polymerisation-promoting switch Transpeptidase PF00905.22 ORF134039 - 0.00091 18.5 0.6 0.0015 17.8 0.6 1.4 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain BTB PF00651.31 ORF131900 - 8.4e-27 93.6 5.5 2.5e-26 92.1 2.1 2.1 1 1 1 2 2 2 1 BTB/POZ domain BACK PF07707.15 ORF131900 - 1.1e-07 31.8 0.5 4.6e-07 29.9 0.1 2.1 2 0 0 2 2 2 1 BTB And C-terminal Kelch CSD PF00313.22 ORF128737 - 5.2e-05 23.0 0.0 9.2e-05 22.2 0.0 1.5 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain SSFA2_C PF14723.6 ORF125151 - 0.18 11.7 0.2 0.36 10.7 0.1 1.5 2 0 0 2 2 2 0 Sperm-specific antigen 2 C-terminus Gtr1_RagA PF04670.12 ORF124197 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DAPG_hydrolase PF18089.1 ORF124072 - 0.051 13.1 0.1 0.085 12.4 0.0 1.4 2 0 0 2 2 2 0 DAPG hydrolase PhiG domain Mannitol_dh_C PF08125.13 ORF123861 - 1.9e-43 148.7 0.0 2.2e-43 148.5 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Gtr1_RagA PF04670.12 ORF123372 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Gtr1_RagA PF04670.12 ORF122408 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Gtr1_RagA PF04670.12 ORF121839 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Talin_middle PF09141.10 ORF121491 - 0.038 14.0 0.3 0.068 13.2 0.2 1.4 1 1 0 1 1 1 0 Talin, middle domain YdjO PF14169.6 ORF121491 - 0.07 12.9 0.6 0.19 11.5 0.6 1.8 1 0 0 1 1 1 0 Cold-inducible protein YdjO Pkinase PF00069.25 ORF121340 - 3.6e-32 111.8 0.4 4.1e-32 111.6 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF121340 - 1.5e-19 70.3 0.2 1.6e-19 70.2 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF121340 - 1.2e-06 28.1 0.0 1.6e-06 27.7 0.0 1.2 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF121340 - 0.00054 18.8 0.0 0.00063 18.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF121340 - 0.00055 19.4 0.1 0.00069 19.0 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF121340 - 0.0011 18.9 0.0 0.0018 18.2 0.0 1.4 2 0 0 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF121340 - 0.0052 16.4 0.1 0.0095 15.5 0.1 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase Haspin_kinase PF12330.8 ORF121340 - 0.023 13.7 0.1 0.035 13.0 0.1 1.2 1 0 0 1 1 1 0 Haspin like kinase domain RIO1 PF01163.22 ORF121340 - 0.085 12.4 0.2 0.12 12.0 0.2 1.3 1 0 0 1 1 1 0 RIO1 family FTA2 PF13095.6 ORF121340 - 0.099 12.3 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 APC_u15 PF16636.5 ORF121092 - 0.14 12.7 1.4 0.32 11.4 0.1 2.1 2 0 0 2 2 2 0 Unstructured region on APC between APC_crr regions 5 and 6 ResB PF05140.14 ORF11987 - 2.1 7.0 3.6 3.2 6.4 3.6 1.2 1 0 0 1 1 1 0 ResB-like family zf-C2HC_2 PF13913.6 ORF118909 - 5.6 7.0 10.7 11 6.0 1.7 3.6 4 0 0 4 4 4 0 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF118909 - 8 7.6 10.9 2.9 9.0 1.0 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger DUF3828 PF12883.7 ORF118466 - 5.2e-28 97.9 0.0 6.2e-28 97.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3828) AAA_5 PF07728.14 ORF118466 - 0.17 11.9 0.1 0.8 9.7 0.0 1.9 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) NKAIN PF05640.14 ORF115565 - 0.044 13.0 0.6 0.058 12.6 0.6 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein Fer4_16 PF13484.6 ORF114106 - 3 8.9 13.3 0.17 12.8 6.3 2.4 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain WD40 PF00400.32 ORF113365 - 0.00016 22.4 0.2 0.00056 20.7 0.1 2.0 3 0 0 3 3 3 1 WD domain, G-beta repeat DUF3377 PF11857.8 ORF112516 - 1.4 8.9 10.9 0.062 13.2 4.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) PRIMA1 PF16101.5 ORF110959 - 0.085 12.9 0.6 0.085 12.9 0.6 2.2 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 DUF2207 PF09972.9 ORF110959 - 0.13 11.0 2.1 0.16 10.7 2.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DHHC PF01529.20 ORF110959 - 0.22 11.7 7.3 0.41 10.8 7.3 1.4 1 0 0 1 1 1 0 DHHC palmitoyltransferase Class_IIIsignal PF04021.12 ORF110959 - 8.1 6.6 12.0 23 5.1 12.0 1.9 1 0 0 1 1 1 0 Class III signal peptide OppC_N PF12911.7 ORF110959 - 8.4 6.5 7.6 2.2e+02 1.9 7.6 2.5 1 1 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C PPR_2 PF13041.6 ORF110879 - 4.2e-11 42.9 0.0 4.7e-06 26.7 0.0 2.3 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF110879 - 1.3e-07 31.5 0.0 0.00012 22.1 0.0 2.1 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF110879 - 9.2e-06 25.6 0.1 0.35 11.2 0.0 3.4 3 0 0 3 3 3 2 PPR repeat PPR_1 PF12854.7 ORF110879 - 0.00015 21.4 0.0 5 6.9 0.0 3.4 3 0 0 3 3 3 3 PPR repeat PPR_long PF17177.4 ORF110879 - 0.0038 16.6 0.0 0.0059 16.0 0.0 1.2 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP ATP-grasp_4 PF13535.6 ORF110879 - 0.13 11.9 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain POB3_N PF17292.2 ORF110060 - 0.078 13.4 0.2 0.15 12.5 0.2 1.5 1 1 0 1 1 1 0 POB3-like N-terminal PH domain AMIN PF11741.8 ORF110060 - 0.096 12.8 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 AMIN domain adh_short PF00106.25 ORF109023 - 2.4e-12 46.7 0.0 3.1e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF109023 - 1.4e-08 34.6 0.0 1.8e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Drf_FH3 PF06367.16 ORF108871 - 0.029 14.0 0.4 0.029 14.0 0.4 1.6 2 0 0 2 2 2 0 Diaphanous FH3 Domain Gtr1_RagA PF04670.12 ORF107814 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF3377 PF11857.8 ORF107422 - 1.4 8.9 10.9 0.062 13.2 4.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) VSG_B PF13206.6 ORF104879 - 0.69 9.1 7.2 1 8.5 7.2 1.4 1 0 0 1 1 1 0 Trypanosomal VSG domain zf-CCHC PF00098.23 ORF103574 - 4.3e-05 23.4 2.3 7.1e-05 22.7 2.3 1.4 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_4 PF14392.6 ORF103574 - 0.062 13.0 0.3 0.11 12.3 0.3 1.4 1 0 0 1 1 1 0 Zinc knuckle HAGH_C PF16123.5 ORF103499 - 5e-18 65.4 0.0 7.5e-18 64.8 0.0 1.3 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 ORF103499 - 0.066 13.2 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily Gtr1_RagA PF04670.12 ORF103332 - 0.092 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF4760 PF15956.5 ORF101887 - 0.026 14.7 0.7 0.039 14.1 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4760) Salp15 PF12115.8 ORF101887 - 4.7 7.7 10.4 1.1 9.7 6.6 1.8 1 1 0 2 2 2 0 Salivary protein of 15kDa inhibits CD4+ T cell activation Caenor_Her-1 PF09232.10 ORF100830 - 0.024 14.8 0.1 0.031 14.4 0.1 1.2 1 0 0 1 1 1 0 Caenorhabditis elegans Her-1 NnrU PF07298.11 ORF100830 - 0.064 12.8 0.0 0.093 12.2 0.0 1.2 1 0 0 1 1 1 0 NnrU protein DUF3339 PF11820.8 NODE_40699_length_508_cov_1.972516_g33195_i0reverse_frame_1 - 1.1 9.5 3.5 0.39 10.9 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3339) Helicase_C PF00271.31 NODE_40695_length_508_cov_2.410148_g33191_i0reverse_frame_1 - 6e-06 26.6 0.0 9.6e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Pinin_SDK_N PF04697.13 NODE_40695_length_508_cov_2.410148_g33191_i0reverse_frame_1 - 0.15 12.7 7.7 0.21 12.2 7.7 1.2 1 0 0 1 1 1 0 pinin/SDK conserved region EspB_PE PF18625.1 NODE_40684_length_508_cov_61.890063_g33181_i0reverse_frame_1 - 0.024 15.1 0.9 0.036 14.5 0.2 1.6 2 0 0 2 2 2 0 ESX-1 secreted protein B PE domain Transglut_N PF00868.20 NODE_40684_length_508_cov_61.890063_g33181_i0reverse_frame_1 - 0.043 14.2 0.0 0.062 13.7 0.0 1.2 1 0 0 1 1 1 0 Transglutaminase family RuvB_N PF05496.12 NODE_40684_length_508_cov_61.890063_g33181_i0forward_frame_1 - 0.046 13.5 0.0 0.059 13.1 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Cupin_4 PF08007.12 NODE_40683_length_508_cov_76.936575_g33180_i0reverse_frame_1 - 3.3e-09 36.7 0.0 1.8e-08 34.2 0.0 1.8 1 1 0 1 1 1 1 Cupin superfamily protein Cupin_8 PF13621.6 NODE_40683_length_508_cov_76.936575_g33180_i0reverse_frame_1 - 8.7e-09 35.5 0.0 2.2e-08 34.1 0.0 1.6 1 1 0 1 1 1 1 Cupin-like domain JmjC PF02373.22 NODE_40683_length_508_cov_76.936575_g33180_i0reverse_frame_1 - 1.6e-08 34.9 0.0 9.5e-08 32.5 0.0 1.9 1 1 0 1 1 1 1 JmjC domain, hydroxylase Cupin_2 PF07883.11 NODE_40683_length_508_cov_76.936575_g33180_i0reverse_frame_1 - 0.0036 17.0 0.0 0.023 14.4 0.0 2.1 2 0 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 NODE_40683_length_508_cov_76.936575_g33180_i0reverse_frame_1 - 0.068 12.8 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Cupin GPI PF06560.11 NODE_40683_length_508_cov_76.936575_g33180_i0reverse_frame_1 - 0.099 11.9 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) DUF2477 PF10631.9 NODE_40683_length_508_cov_76.936575_g33180_i0forward_frame_1 - 0.015 16.0 6.8 0.022 15.4 6.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2477) UCH_1 PF13423.6 NODE_40681_length_508_cov_84.192389_g33178_i0forward_frame_1 - 0.0014 18.3 0.2 0.0014 18.3 0.2 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF2028 PF09667.10 NODE_40670_length_508_cov_108.980973_g33168_i0reverse_frame_1 - 0.031 14.3 2.1 0.04 13.9 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2028) DUF4322 PF14210.6 NODE_40654_length_508_cov_284.748414_g33153_i0forward_frame_1 - 0.099 12.5 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) RCC1 PF00415.18 NODE_40644_length_509_cov_1.854430_g33145_i0forward_frame_1 - 2e-36 124.3 0.2 8.9e-13 48.7 0.0 3.1 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_40644_length_509_cov_1.854430_g33145_i0forward_frame_1 - 1.3e-14 53.5 1.3 3.7e-08 33.0 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PMG PF05287.12 NODE_40634_length_509_cov_3.027426_g33135_i0forward_frame_1 - 0.7 9.9 12.0 0.88 9.6 12.0 1.2 1 0 0 1 1 1 0 PMG protein Sorb PF02208.16 NODE_40633_length_509_cov_3.286920_g33134_i0reverse_frame_1 - 0.05 13.5 0.1 0.1 12.5 0.1 1.5 1 0 0 1 1 1 0 Sorbin homologous domain CDC24_OB1 PF17246.2 NODE_40632_length_509_cov_3.430380_g33133_i0reverse_frame_1 - 0.12 12.5 0.1 0.17 12.0 0.1 1.2 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 1 DUF4116 PF13475.6 NODE_40627_length_509_cov_42.504219_g33128_i0forward_frame_1 - 3.4e-08 33.1 0.0 5.9e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4116) PDZ PF00595.24 NODE_40625_length_509_cov_57.303797_g33126_i0forward_frame_1 - 0.031 14.6 0.4 0.091 13.1 0.1 2.0 2 1 0 2 2 2 0 PDZ domain ATP-synt_F PF01990.17 NODE_40612_length_509_cov_94.006329_g33113_i0reverse_frame_1 - 0.047 14.0 0.2 0.09 13.1 0.2 1.5 1 0 0 1 1 1 0 ATP synthase (F/14-kDa) subunit DUF5563 PF17718.1 NODE_40600_length_509_cov_302.443038_g33103_i0forward_frame_1 - 0.11 12.1 0.6 0.13 11.9 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5563) Ribosomal_S25 PF03297.15 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 2.8e-28 98.1 3.1 2.8e-28 98.1 3.1 2.1 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 0.01 15.4 0.5 0.013 15.1 0.5 1.2 1 0 0 1 1 1 0 Peptidase family S41 GntR PF00392.21 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 0.1 12.3 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 0.37 11.2 6.6 17 5.8 6.6 2.2 1 1 0 1 1 1 0 Recombinase AP3D1 PF06375.11 NODE_40590_length_509_cov_3393.535865_g33093_i0reverse_frame_1 - 4.1 7.6 11.8 3.3 7.9 4.2 2.1 2 0 0 2 2 2 0 AP-3 complex subunit delta-1 DUF4287 PF14117.6 NODE_40584_length_510_cov_1.562105_g33089_i0reverse_frame_1 - 2.6 8.3 4.2 30 4.8 0.0 2.9 4 0 0 4 4 4 0 Domain of unknown function (DUF4287) DUF4346 PF14251.6 NODE_40578_length_510_cov_3.221053_g33083_i0reverse_frame_1 - 0.077 13.0 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4346) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks144.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks144.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks144.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks144.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-CCCH_4 PF18044.1 NODE_40555_length_510_cov_123.511579_g33060_i0reverse_frame_1 - 1.8e-05 24.4 5.3 2.3e-05 24.1 3.2 2.0 2 0 0 2 2 2 1 CCCH-type zinc finger zf-CCCH PF00642.24 NODE_40555_length_510_cov_123.511579_g33060_i0reverse_frame_1 - 0.00072 19.4 4.3 0.00072 19.4 4.3 1.7 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_40555_length_510_cov_123.511579_g33060_i0reverse_frame_1 - 0.002 18.1 2.1 0.002 18.1 2.1 2.0 2 1 0 2 2 2 1 Zinc finger domain Torus PF16131.5 NODE_40555_length_510_cov_123.511579_g33060_i0reverse_frame_1 - 0.056 14.1 1.1 0.056 14.1 1.1 2.4 1 1 0 2 2 2 0 Torus domain Presenilin PF01080.17 NODE_40555_length_510_cov_123.511579_g33060_i0reverse_frame_1 - 8.4 5.0 7.8 10 4.8 7.8 1.2 1 0 0 1 1 1 0 Presenilin SK_channel PF03530.14 NODE_40555_length_510_cov_123.511579_g33060_i0forward_frame_1 - 4.2 7.4 11.0 1.8 8.5 4.6 2.1 2 0 0 2 2 2 0 Calcium-activated SK potassium channel DUF3677 PF12432.8 NODE_40544_length_510_cov_221.947368_g33050_i0forward_frame_1 - 0.011 16.0 0.2 0.022 15.1 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3677) DUF2206 PF09971.9 NODE_40542_length_510_cov_262.776842_g33048_i0forward_frame_1 - 0.0056 15.5 4.5 0.0073 15.1 4.5 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2206) DUF4483 PF14825.6 NODE_40534_length_511_cov_2.254202_g33043_i0forward_frame_3 - 0.011 15.4 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4483) ArAE_1_C PF11728.8 NODE_40530_length_511_cov_2.611345_g33039_i0reverse_frame_3 - 0.087 12.8 0.0 1.1 9.3 0.0 2.0 2 0 0 2 2 2 0 Putative aromatic acid exporter C-terminal domain Bac_DNA_binding PF00216.21 NODE_40530_length_511_cov_2.611345_g33039_i0forward_frame_2 - 0.068 13.4 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial DNA-binding protein Flavi_NS4A PF01350.17 NODE_40526_length_511_cov_3.176471_g33035_i0reverse_frame_2 - 0.0055 16.6 4.3 0.0055 16.6 4.3 1.6 2 0 0 2 2 2 1 Flavivirus non-structural protein NS4A TFIID-18kDa PF02269.16 NODE_40524_length_511_cov_4.111345_g33033_i0reverse_frame_3 - 0.028 14.4 0.1 0.057 13.4 0.1 1.5 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit TetR_C_23 PF17931.1 NODE_40524_length_511_cov_4.111345_g33033_i0reverse_frame_3 - 0.046 13.8 0.1 0.086 13.0 0.1 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF1146 PF06612.11 NODE_40521_length_511_cov_17.500000_g33030_i0reverse_frame_2 - 0.12 12.5 0.2 16 5.6 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1146) Sulfotransfer_4 PF17784.1 NODE_40504_length_511_cov_125.926471_g33014_i0reverse_frame_2 - 0.073 12.9 0.0 0.16 11.8 0.0 1.5 2 0 0 2 2 2 0 Sulfotransferase domain MBR1 PF17058.5 NODE_40504_length_511_cov_125.926471_g33014_i0forward_frame_2 - 0.094 13.0 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial biogenesis regulation protein 1 RDD PF06271.12 NODE_40494_length_511_cov_352.831933_g33005_i0reverse_frame_2 - 0.038 14.2 0.0 0.047 13.9 0.0 1.1 1 0 0 1 1 1 0 RDD family DX PF01666.17 NODE_40487_length_511_cov_4477.163866_g33001_i0forward_frame_2 - 0.037 14.5 0.4 0.08 13.4 0.4 1.7 1 0 0 1 1 1 0 DX module SSXRD PF09514.10 NODE_40480_length_512_cov_2.693920_g32996_i0reverse_frame_3 - 0.082 12.5 2.7 0.19 11.3 2.7 1.6 1 0 0 1 1 1 0 SSXRD motif Pyr_redox_2 PF07992.14 NODE_40480_length_512_cov_2.693920_g32996_i0forward_frame_3 - 8e-20 71.3 0.2 1.1e-19 70.8 0.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 NODE_40480_length_512_cov_2.693920_g32996_i0forward_frame_3 - 6e-18 65.1 0.0 1.4e-17 63.9 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UPF0184 PF03670.13 NODE_40474_length_512_cov_50.197065_g32991_i0forward_frame_2 - 0.0061 16.9 1.1 0.016 15.6 0.1 2.0 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0184) MukB_hinge PF16330.5 NODE_40470_length_512_cov_70.025157_g32987_i0reverse_frame_3 - 0.072 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 MukB hinge domain DUF3278 PF11683.8 NODE_40470_length_512_cov_70.025157_g32987_i0forward_frame_3 - 3 8.0 6.3 0.4 10.8 1.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3278) MT PF12777.7 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 2.2e-12 46.7 1.7 2.6e-12 46.4 1.7 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor APG6_N PF17675.1 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.0023 18.5 9.2 0.0028 18.2 9.2 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region Exonuc_VII_L PF02601.15 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.013 15.1 4.2 0.015 14.9 4.2 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF745 PF05335.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.017 14.8 6.7 0.023 14.4 6.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) DUF3450 PF11932.8 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.026 13.9 5.7 0.038 13.3 5.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Tropomyosin_1 PF12718.7 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.028 14.6 10.2 0.16 12.1 10.4 2.0 1 1 0 1 1 1 0 Tropomyosin like DUF948 PF06103.11 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.032 14.5 3.7 0.28 11.5 0.2 2.8 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) TMPIT PF07851.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.036 13.3 3.3 0.052 12.8 3.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein Tmemb_9 PF05434.11 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.039 13.8 1.9 0.071 13.0 1.9 1.7 1 1 0 1 1 1 0 TMEM9 Viral_P18 PF04521.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.053 13.3 1.0 0.087 12.6 0.3 1.7 1 1 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein FlaC_arch PF05377.11 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.069 13.5 1.2 0.069 13.5 1.2 3.1 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) Fez1 PF06818.15 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.07 13.6 7.9 0.088 13.2 7.3 1.4 1 1 0 1 1 1 0 Fez1 RPW8 PF05659.11 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.11 12.1 4.1 0.18 11.5 0.9 2.2 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 HIP1_clath_bdg PF16515.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.12 13.0 11.9 1.4 9.6 10.9 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 PI3K_P85_iSH2 PF16454.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.18 11.4 8.5 0.49 10.0 8.1 1.9 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain FAM76 PF16046.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.34 10.2 5.5 0.41 9.9 5.5 1.1 1 0 0 1 1 1 0 FAM76 protein LMBR1 PF04791.16 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.35 9.7 2.2 0.38 9.6 2.2 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2730 PF10805.8 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.45 10.6 5.3 1.6 8.9 1.4 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF2730) NPV_P10 PF05531.12 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.52 10.8 5.8 1.2 9.7 5.3 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein GrpE PF01025.19 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.59 9.8 6.6 1.4 8.6 5.5 1.9 2 0 0 2 2 2 0 GrpE Seryl_tRNA_N PF02403.22 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.61 10.3 11.5 0.13 12.5 7.4 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Laminin_II PF06009.12 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.71 9.9 10.0 0.85 9.6 7.9 2.1 1 1 1 2 2 2 0 Laminin Domain II PilO PF04350.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 0.81 9.8 8.3 5.1 7.3 2.9 2.2 2 0 0 2 2 2 0 Pilus assembly protein, PilO TPR_MLP1_2 PF07926.12 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 1.2 9.2 13.8 1.7 8.7 7.1 2.4 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein TolA_bind_tri PF16331.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 1.7 8.8 10.9 5.2 7.2 1.2 2.4 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF4140 PF13600.6 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 2.1 8.8 5.4 0.77 10.2 1.3 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) BST2 PF16716.5 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 3.4 8.3 12.1 0.56 10.8 5.3 2.5 2 1 0 3 3 2 0 Bone marrow stromal antigen 2 YabA PF06156.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 4 8.1 7.8 4.4 8.0 5.7 2.1 2 1 0 2 2 2 0 Initiation control protein YabA Uso1_p115_C PF04871.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 5.3 7.4 12.5 3.7 7.9 6.7 2.2 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region PCRF PF03462.18 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 6 6.7 8.3 4.5 7.1 3.7 1.7 1 1 1 2 2 2 0 PCRF domain DivIVA PF05103.13 NODE_40469_length_512_cov_71.752621_g32986_i0reverse_frame_2 - 6.4 6.9 10.5 3.7 7.7 7.9 1.8 1 1 1 2 2 2 0 DivIVA protein IL13 PF03487.13 NODE_40469_length_512_cov_71.752621_g32986_i0forward_frame_3 - 0.21 11.4 4.5 0.3 10.9 4.5 1.4 1 1 0 1 1 1 0 Interleukin-13 PHD20L1_u1 PF16660.5 NODE_40466_length_512_cov_92.348008_g32983_i0reverse_frame_2 - 0.8 10.5 4.6 0.39 11.5 2.2 1.7 2 0 0 2 2 2 0 PHD finger protein 20-like protein 1 DPRP PF04244.13 NODE_40465_length_512_cov_92.704403_g32982_i0forward_frame_3 - 0.17 11.7 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Deoxyribodipyrimidine photo-lyase-related protein MSL2-CXC PF16682.5 NODE_40465_length_512_cov_92.704403_g32982_i0forward_frame_2 - 1.4 9.1 15.5 1.1 9.4 0.5 3.3 3 0 0 3 3 3 0 CXC domain of E3 ubiquitin-protein ligase MSL2 cNMP_binding PF00027.29 NODE_40464_length_512_cov_95.559748_g32981_i0reverse_frame_2 - 2e-07 31.0 0.0 3.6e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Pkinase_Tyr PF07714.17 NODE_40464_length_512_cov_95.559748_g32981_i0reverse_frame_2 - 0.066 12.5 0.0 0.08 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase TraS PF10624.9 NODE_40464_length_512_cov_95.559748_g32981_i0forward_frame_2 - 0.46 10.4 6.5 0.16 11.9 2.4 2.1 1 1 1 2 2 2 0 Plasmid conjugative transfer entry exclusion protein TraS BNR_6 PF15899.5 NODE_40461_length_512_cov_104.125786_g32978_i0reverse_frame_2 - 0.027 14.5 1.8 0.088 12.9 0.2 2.3 2 0 0 2 2 2 0 BNR-Asp box repeat ADH_N PF08240.12 NODE_40458_length_512_cov_114.482180_g32975_i0reverse_frame_3 - 0.00098 19.0 0.0 0.002 18.0 0.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Babuvirus_MP PF07234.11 NODE_40453_length_512_cov_164.574423_g32970_i0reverse_frame_3 - 7.2 6.8 6.5 1.3 9.2 1.8 2.0 2 0 0 2 2 2 0 Movement and RNA silencing protein Ferritin-like PF12902.7 NODE_40453_length_512_cov_164.574423_g32970_i0forward_frame_2 - 0.19 11.6 5.8 0.23 11.3 5.8 1.1 1 0 0 1 1 1 0 Ferritin-like RBP_receptor PF14752.6 NODE_40453_length_512_cov_164.574423_g32970_i0forward_frame_2 - 2.2 6.8 3.7 0.71 8.4 1.3 1.4 1 1 0 1 1 1 0 Retinol binding protein receptor Presenilin PF01080.17 NODE_40453_length_512_cov_164.574423_g32970_i0forward_frame_2 - 7.3 5.2 10.7 8.5 5.0 10.7 1.1 1 0 0 1 1 1 0 Presenilin ALMT PF11744.8 NODE_40453_length_512_cov_164.574423_g32970_i0forward_frame_2 - 7.5 5.3 8.5 9 5.0 8.5 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Nucleoside_tran PF01733.18 NODE_40446_length_512_cov_208.396226_g32963_i0forward_frame_3 - 1.4e-13 51.0 0.5 2.1e-13 50.3 0.5 1.3 1 0 0 1 1 1 1 Nucleoside transporter DUF5345 PF17280.2 NODE_40446_length_512_cov_208.396226_g32963_i0forward_frame_3 - 0.74 9.8 0.0 0.74 9.8 0.0 2.3 3 0 0 3 3 3 0 Family of unknown function (DUF5345) CgtA PF06306.11 NODE_40445_length_512_cov_226.637317_g32962_i0forward_frame_3 - 0.12 11.8 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Beta-1,4-N-acetylgalactosaminyltransferase (CgtA) Phtf-FEM1B_bdg PF12129.8 NODE_40438_length_512_cov_517.914046_g32956_i0reverse_frame_3 - 7.1 6.4 7.5 0.5 10.2 0.7 2.0 1 1 1 2 2 2 0 Male germ-cell putative homeodomain transcription factor MR_MLE_N PF02746.16 NODE_40423_length_513_cov_2.592050_g32944_i0reverse_frame_3 - 1.7e-29 102.4 0.0 2.9e-29 101.6 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Enolase_N PF03952.16 NODE_40423_length_513_cov_2.592050_g32944_i0reverse_frame_3 - 0.024 14.8 0.0 0.04 14.1 0.0 1.4 1 0 0 1 1 1 0 Enolase, N-terminal domain p450 PF00067.22 NODE_40418_length_513_cov_3.757322_g32939_i0forward_frame_2 - 1.8e-13 50.1 0.0 1.9e-13 50.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Spo0A_C PF08769.11 NODE_40418_length_513_cov_3.757322_g32939_i0forward_frame_2 - 0.035 14.2 0.3 0.13 12.3 0.0 2.0 2 1 0 2 2 2 0 Sporulation initiation factor Spo0A C terminal DUF1539 PF07560.11 NODE_40418_length_513_cov_3.757322_g32939_i0forward_frame_2 - 0.19 11.8 1.8 0.53 10.4 0.3 2.0 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1539) Ribosomal_S3Ae PF01015.18 NODE_40409_length_513_cov_71.140167_g32931_i0reverse_frame_3 - 0.023 14.3 0.1 0.035 13.7 0.1 1.2 1 0 0 1 1 1 0 Ribosomal S3Ae family ABC2_membrane_3 PF12698.7 NODE_40401_length_513_cov_83.018828_g32923_i0reverse_frame_2 - 1.4e-05 24.4 6.5 2e-05 23.9 6.5 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 NODE_40401_length_513_cov_83.018828_g32923_i0reverse_frame_2 - 0.022 14.1 1.7 0.022 14.1 1.7 1.4 1 1 0 1 1 1 0 ABC-2 family transporter protein NRN1 PF15056.6 NODE_40392_length_513_cov_124.269874_g32914_i0forward_frame_3 - 0.36 11.0 1.9 2 8.6 0.7 2.1 2 0 0 2 2 2 0 Neuritin protein family DNA_methylase PF00145.17 NODE_40389_length_513_cov_143.974895_g32911_i0reverse_frame_3 - 8.1e-08 32.0 0.0 1.1e-07 31.6 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase HGWP PF03578.15 NODE_40389_length_513_cov_143.974895_g32911_i0reverse_frame_3 - 2 8.0 4.3 2.2 7.9 0.2 2.8 3 0 0 3 3 3 0 HGWP repeat NESP55 PF06390.12 NODE_40385_length_513_cov_229.395397_g2095_i1reverse_frame_2 - 0.27 10.8 0.2 0.64 9.6 0.1 1.6 1 1 1 2 2 2 0 Neuroendocrine-specific golgi protein P55 (NESP55) Bestrophin PF01062.21 NODE_40368_length_513_cov_6031.707113_g22939_i4reverse_frame_3 - 3.2 7.1 8.5 0.093 12.1 2.7 1.4 2 0 0 2 2 2 0 Bestrophin, RFP-TM, chloride channel Asp_Arg_Hydrox PF05118.15 ORF97428 - 3.2e-28 98.5 0.3 9.5e-28 97.0 0.0 1.7 2 0 0 2 2 2 1 Aspartyl/Asparaginyl beta-hydroxylase Cupin_2 PF07883.11 ORF97428 - 0.0079 15.9 0.0 0.022 14.5 0.0 1.9 1 1 0 1 1 1 1 Cupin domain DUF4113 PF13438.6 ORF97355 - 0.035 14.2 0.0 0.073 13.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4113) zf-Tim10_DDP PF02953.15 ORF97251 - 0.0011 18.5 5.7 0.0063 16.1 2.5 2.5 2 0 0 2 2 2 1 Tim10/DDP family zinc finger VID27_PH PF17747.1 ORF97251 - 0.087 13.1 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 VID27 PH-like domain Peptidase_S46 PF10459.9 ORF97251 - 0.087 11.5 2.3 0.12 11.0 2.3 1.3 1 1 0 1 1 1 0 Peptidase S46 PPR PF01535.20 ORF97081 - 1.8 9.0 4.2 3.1 8.3 0.4 3.0 3 1 1 4 4 4 0 PPR repeat zf-Tim10_DDP PF02953.15 ORF96643 - 0.099 12.3 3.3 0.28 10.9 3.3 1.7 1 0 0 1 1 1 0 Tim10/DDP family zinc finger DUF2475 PF10629.9 ORF95843 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) CHCH PF06747.13 ORF91929 - 8.9e-06 25.7 9.1 1.3e-05 25.1 9.1 1.3 1 0 0 1 1 1 1 CHCH domain DUF2076 PF09849.9 ORF91929 - 2.4 8.2 15.5 3.1 7.8 15.5 1.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Exo_endo_phos PF03372.23 ORF91511 - 8.9e-07 28.7 0.0 1.1e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF91511 - 0.17 11.7 0.0 0.31 10.9 0.0 1.6 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase DUF3391 PF11871.8 ORF89886 - 0.14 12.7 5.2 3 8.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) CDC45 PF02724.14 ORF89886 - 0.75 8.0 6.5 0.75 8.0 6.5 1.1 1 0 0 1 1 1 0 CDC45-like protein TERB2 PF15101.6 ORF89886 - 5.3 7.0 9.3 5.8 6.9 9.3 1.3 1 1 0 1 1 1 0 Telomere-associated protein TERB2 DUF5110 PF17137.4 ORF89164 - 0.00072 19.8 0.0 0.0014 18.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) HTS PF04204.16 ORF89164 - 0.13 11.2 0.0 0.17 10.8 0.0 1.1 1 0 0 1 1 1 0 Homoserine O-succinyltransferase Gtr1_RagA PF04670.12 ORF88726 - 1.2e-21 77.2 0.7 1.7e-21 76.6 0.4 1.4 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Herpes_UL33 PF03581.13 ORF88726 - 0.23 11.8 1.3 3.2 8.2 0.2 2.4 2 1 0 2 2 2 0 Herpesvirus UL33-like protein LRR_6 PF13516.6 ORF88690 - 4.2e-05 23.3 0.0 0.0061 16.5 0.1 2.5 2 0 0 2 2 2 1 Leucine Rich repeat FAM199X PF15814.5 ORF88690 - 0.002 17.3 0.6 0.0022 17.1 0.6 1.2 1 0 0 1 1 1 1 Protein family FAM199X LRR_4 PF12799.7 ORF88690 - 0.0075 16.7 1.5 0.18 12.3 0.1 2.8 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) EIIBC-GUT_N PF03612.14 ORF88690 - 0.01 15.6 0.7 0.014 15.2 0.7 1.2 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Transformer PF06495.11 ORF88690 - 3 7.9 10.3 4.5 7.3 10.3 1.2 1 0 0 1 1 1 0 Fruit fly transformer protein Neugrin PF06413.11 ORF846 - 0.15 12.1 3.7 0.35 10.9 3.5 1.7 1 1 0 1 1 1 0 Neugrin Ribosomal_L11 PF00298.19 ORF83579 - 0.1 13.1 0.3 1.4 9.5 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein L11, RNA binding domain Prion PF00377.18 ORF83351 - 0.0044 16.8 1.4 0.69 9.8 0.0 2.6 3 0 0 3 3 3 2 Prion/Doppel alpha-helical domain DUF3045 PF11243.8 ORF83346 - 0.015 15.4 2.9 0.029 14.5 2.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3045) DpnI_C PF17726.1 ORF83346 - 0.88 9.7 10.5 0.16 12.1 4.1 2.8 1 1 1 3 3 3 0 Dam-replacing HTH domain HMMR_N PF15905.5 ORF7570 - 0.0028 17.2 18.4 0.0034 16.9 18.4 1.3 1 1 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal PKcGMP_CC PF16808.5 ORF7570 - 0.0075 16.1 1.7 0.0075 16.1 1.7 3.8 3 1 1 4 4 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase CPSase_L_D2 PF02786.17 ORF7570 - 0.11 11.9 0.3 0.2 11.1 0.2 1.4 1 1 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain DUF641 PF04859.12 ORF7570 - 0.51 10.7 10.7 4.6 7.6 2.1 2.4 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) bZIP_1 PF00170.21 ORF7570 - 1.8 8.7 17.8 1.5 9.0 7.0 3.2 2 2 1 3 3 3 0 bZIP transcription factor Prominin PF05478.11 ORF7570 - 2.3 6.1 10.0 1.2 7.0 7.5 1.7 1 1 1 2 2 2 0 Prominin Tropomyosin_1 PF12718.7 ORF7570 - 3.8 7.6 22.5 1.5 9.0 19.1 2.0 1 1 1 2 2 2 0 Tropomyosin like M PF02370.16 ORF7570 - 8.5 7.3 13.8 12 6.8 0.3 4.6 3 1 1 4 4 4 0 M protein repeat Albumin_I_a PF16720.5 ORF75643 - 0.054 13.4 1.4 0.1 12.5 1.4 1.4 1 0 0 1 1 1 0 Albumin I chain a DUF5331 PF17265.2 ORF74501 - 0.038 13.7 0.5 0.078 12.7 0.5 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5331) Init_tRNA_PT PF04179.12 ORF73939 - 0.0016 18.7 0.2 0.0026 18.1 0.2 1.2 1 0 0 1 1 1 1 Rit1 DUSP-like domain NPA PF16469.5 ORF73939 - 0.0064 17.1 0.9 0.095 13.3 0.0 2.2 2 0 0 2 2 2 1 Nematode polyprotein allergen ABA-1 Stirrup PF09061.6 ORF73939 - 0.054 13.7 0.4 0.11 12.7 0.0 1.7 2 0 0 2 2 2 0 Stirrup DUF2418 PF10332.9 ORF73528 - 7.6 7.1 9.1 0.4 11.2 2.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2418) DUF4808 PF16066.5 ORF71991 - 5.8 7.5 7.0 0.79 10.3 2.3 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4808) SICA_alpha PF12887.7 ORF71222 - 0.091 12.6 10.4 0.05 13.5 6.5 2.0 2 0 0 2 2 2 0 SICA extracellular alpha domain DUF4337 PF14235.6 ORF71222 - 0.34 11.0 13.2 0.075 13.1 9.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) DUF1943 PF09172.11 ORF71222 - 0.8 8.9 12.5 1.4 8.1 11.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF1943) DUF4407 PF14362.6 ORF71222 - 9.9 5.4 8.7 12 5.1 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4808 PF16066.5 ORF71162 - 5.8 7.5 7.0 0.79 10.3 2.3 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4808) DUF4527 PF15030.6 ORF70834 - 0.28 10.6 2.5 0.37 10.2 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) Peptidase_S9 PF00326.21 ORF69523 - 1.6e-29 103.0 0.0 1.8e-29 102.7 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family EF-hand_5 PF13202.6 ORF69380 - 0.00049 19.5 0.0 0.00087 18.7 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF69380 - 0.00053 19.7 0.0 0.0013 18.5 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF69380 - 0.0025 17.3 0.0 0.0066 15.9 0.0 1.7 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF69380 - 0.0098 16.3 0.1 0.028 14.9 0.0 1.9 2 1 0 2 2 2 1 EF-hand domain pair DUF2475 PF10629.9 ORF68820 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) Atg14 PF10186.9 ORF68451 - 0.00013 21.1 0.1 0.00018 20.7 0.1 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 mTERF PF02536.14 ORF6652 - 2e-08 33.5 1.1 2.5e-08 33.2 1.1 1.1 1 0 0 1 1 1 1 mTERF MoCF_biosynth PF00994.24 ORF65027 - 6.4e-33 113.4 0.0 7.5e-33 113.2 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain CdvA PF18822.1 ORF63797 - 0.011 15.5 1.0 0.027 14.3 0.5 1.8 1 1 0 1 1 1 0 CdvA-like coiled-coil domain MSP7_C PF12948.7 ORF63797 - 0.036 14.7 3.7 0.046 14.4 3.7 1.2 1 0 0 1 1 1 0 MSP7-like protein C-terminal domain Acyl_transf_3 PF01757.22 ORF62476 - 0.002 17.3 6.9 0.0026 16.9 6.9 1.0 1 0 0 1 1 1 1 Acyltransferase family FeoB_associated PF12669.7 ORF62476 - 0.14 12.6 1.3 2.2 8.8 0.0 3.0 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein MFS_Mycoplasma PF07672.13 ORF62476 - 0.21 10.8 9.5 0.84 8.9 0.1 2.6 1 1 2 3 3 3 0 Mycoplasma MFS transporter DUF3675 PF12428.8 ORF62476 - 0.27 11.8 2.7 3.8 8.1 0.5 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3675) DUF4181 PF13789.6 ORF62476 - 0.49 10.7 13.5 3.8 7.8 7.1 3.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4181) Bac_export_2 PF01312.19 ORF62476 - 2.6 7.2 4.9 1.3 8.2 0.8 1.8 1 1 0 2 2 2 0 FlhB HrpN YscU SpaS Family Tetraspanin PF00335.20 ORF62476 - 5.5 6.6 11.2 11 5.6 11.2 1.6 1 1 0 1 1 1 0 Tetraspanin family COX2_TM PF02790.15 ORF62476 - 7.4 6.8 10.8 7.3 6.8 0.1 3.0 2 1 1 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane domain DUF2475 PF10629.9 ORF59733 - 0.00017 21.7 0.2 0.00041 20.5 0.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) COX2_TM PF02790.15 ORF59082 - 5.1 7.3 8.0 3.9 7.7 0.6 2.3 2 0 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain WD40 PF00400.32 ORF58612 - 6.1e-23 80.7 12.6 7.6e-07 29.7 0.2 4.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF58612 - 2e-08 34.4 0.1 0.0072 16.6 0.0 3.2 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain PALB2_WD40 PF16756.5 ORF58612 - 2e-05 23.7 0.5 8e-05 21.7 0.0 1.9 1 1 1 2 2 2 1 Partner and localizer of BRCA2 WD40 domain Ge1_WD40 PF16529.5 ORF58612 - 0.001 18.1 0.0 0.19 10.6 0.0 2.2 2 0 0 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 ORF58612 - 0.0033 16.8 0.0 0.0056 16.0 0.0 1.4 1 1 0 1 1 1 1 WD40-like domain PQQ_2 PF13360.6 ORF58612 - 0.0071 16.0 0.2 0.025 14.1 0.1 1.8 1 1 1 2 2 2 1 PQQ-like domain Nup160 PF11715.8 ORF58612 - 0.015 14.0 3.5 0.084 11.5 0.2 2.6 1 1 0 2 2 2 0 Nucleoporin Nup120/160 PQQ_3 PF13570.6 ORF58612 - 0.018 15.5 6.1 0.41 11.2 0.0 3.5 3 1 0 3 3 3 0 PQQ-like domain RAB3GAP2_N PF14655.6 ORF58612 - 0.2 10.9 0.0 3.5 6.8 0.0 2.1 2 0 0 2 2 2 0 Rab3 GTPase-activating protein regulatory subunit N-terminus DOMON PF03351.17 ORF57398 - 0.04 14.1 0.0 0.063 13.5 0.0 1.3 1 0 0 1 1 1 0 DOMON domain DUF1786 PF08735.10 ORF57398 - 0.13 11.6 0.1 0.15 11.3 0.1 1.1 1 0 0 1 1 1 0 Putative pyruvate format-lyase activating enzyme (DUF1786) CRAL_TRIO_2 PF13716.6 ORF57065 - 1.5e-10 41.3 1.8 2e-10 41.0 1.8 1.1 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF4061 PF13270.6 ORF56607 - 0.26 11.6 1.3 0.4 11.0 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4061) US22 PF02393.16 ORF52293 - 0.0024 18.2 3.8 0.027 14.7 1.9 2.2 1 1 1 2 2 2 2 US22 like MG4 PF17789.1 ORF51195 - 0.11 12.7 0.8 0.19 11.9 0.8 1.7 1 1 0 1 1 1 0 Macroglobulin domain MG4 Pox_Ag35 PF03286.14 ORF51195 - 0.84 9.4 22.8 1.2 8.8 22.8 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein RRN3 PF05327.11 ORF51195 - 2.1 6.8 17.3 2.5 6.5 17.3 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 DUF3827 PF12877.7 ORF51195 - 9.9 4.4 15.0 12 4.1 15.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) MID_pPIWI_RE PF18157.1 ORF51041 - 0.021 15.1 1.0 0.033 14.5 0.5 1.8 1 1 1 2 2 2 0 MID domain of pPIWI_RE zf-Tim10_DDP PF02953.15 ORF47406 - 0.0027 17.3 6.2 0.014 15.1 2.9 2.4 2 0 0 2 2 2 1 Tim10/DDP family zinc finger Peptidase_S46 PF10459.9 ORF47406 - 0.041 12.5 0.9 0.048 12.3 0.9 1.2 1 0 0 1 1 1 0 Peptidase S46 DUF842 PF05811.13 ORF47406 - 0.12 12.0 10.1 0.38 10.4 4.1 2.2 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF842) DUF3391 PF11871.8 ORF47217 - 0.14 12.7 5.2 3 8.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) CDC45 PF02724.14 ORF47217 - 0.75 8.0 6.5 0.75 8.0 6.5 1.1 1 0 0 1 1 1 0 CDC45-like protein TERB2 PF15101.6 ORF47217 - 5.3 7.0 9.3 5.8 6.9 9.3 1.3 1 1 0 1 1 1 0 Telomere-associated protein TERB2 Fusion_gly_K PF01621.17 ORF45657 - 0.053 12.6 0.1 0.062 12.4 0.1 1.0 1 0 0 1 1 1 0 Cell fusion glycoprotein K Dymeclin PF09742.9 ORF45657 - 0.068 11.6 0.6 0.084 11.3 0.6 1.1 1 0 0 1 1 1 0 Dyggve-Melchior-Clausen syndrome protein NB PF04159.13 ORF45657 - 0.071 13.1 0.1 0.097 12.7 0.1 1.2 1 0 0 1 1 1 0 NB glycoprotein MFS_1 PF07690.16 ORF4536 - 0.00014 20.9 12.5 0.00018 20.6 8.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Nucleos_tra2_C PF07662.13 ORF4536 - 0.031 14.1 0.7 0.046 13.6 0.7 1.3 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus ATG22 PF11700.8 ORF4536 - 0.032 12.9 5.1 0.038 12.6 5.1 1.1 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like Sugar_tr PF00083.24 ORF4536 - 0.046 12.6 9.0 0.058 12.2 9.0 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter DUF5392 PF17370.2 ORF4536 - 0.064 13.3 1.5 5.5 7.1 2.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5392) DUF1772 PF08592.11 ORF4536 - 0.59 10.4 2.4 37 4.6 3.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1772) RS4NT PF08071.12 ORF42299 - 0.074 13.2 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 RS4NT (NUC023) domain MSP7_C PF12948.7 ORF41953 - 0.018 15.7 1.9 0.025 15.2 1.9 1.2 1 0 0 1 1 1 0 MSP7-like protein C-terminal domain AMP-binding_C_2 PF14535.6 ORF41953 - 0.039 14.3 0.2 0.077 13.3 0.1 1.6 2 0 0 2 2 2 0 AMP-binding enzyme C-terminal domain MGS PF02142.22 ORF41953 - 0.05 13.8 0.0 0.075 13.2 0.0 1.3 1 0 0 1 1 1 0 MGS-like domain CdvA PF18822.1 ORF41953 - 0.053 13.4 0.3 0.097 12.5 0.3 1.5 1 0 0 1 1 1 0 CdvA-like coiled-coil domain DUF5344 PF17279.2 ORF41953 - 0.11 13.1 0.3 0.16 12.6 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5344) zf-B_box PF00643.24 ORF41953 - 1.5 9.0 11.4 3.4 7.9 11.4 1.6 1 0 0 1 1 1 0 B-box zinc finger CoA_trans PF01144.23 ORF41767 - 1.3e-23 83.5 0.0 1.6e-23 83.3 0.0 1.0 1 0 0 1 1 1 1 Coenzyme A transferase Glyco_tran_28_C PF04101.16 ORF41571 - 8.2e-24 84.5 0.0 9e-24 84.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain DUF2475 PF10629.9 ORF40886 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) ATP19 PF11022.8 ORF40368 - 0.036 14.4 2.0 0.036 14.4 2.0 2.3 2 0 0 2 2 2 0 ATP synthase subunit K DUF86 PF01934.17 ORF40368 - 0.13 12.1 5.9 1.2 9.1 1.5 2.8 2 1 1 3 3 3 0 Protein of unknown function DUF86 HEPN_Apea PF18739.1 ORF40368 - 0.88 10.0 5.8 2.1 8.8 5.8 1.8 1 1 0 1 1 1 0 Apea-like HEPN Arf PF00025.21 ORF40243 - 2.2e-77 258.4 0.2 2.5e-77 258.3 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF40243 - 2.1e-14 53.8 0.0 2.8e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF40243 - 1.1e-13 51.0 0.0 1.4e-13 50.7 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF40243 - 2.2e-13 50.1 0.0 2.6e-13 49.9 0.0 1.0 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF40243 - 9.4e-12 44.8 0.4 8.3e-08 31.8 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF40243 - 2.4e-10 40.2 0.0 2.9e-10 39.9 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF40243 - 1.2e-05 25.4 0.0 1.9e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF40243 - 0.012 14.9 0.1 0.023 14.0 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF40243 - 0.014 15.5 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain Kinase-like PF14531.6 ORF4020 - 0.0084 15.5 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like N_BRCA1_IG PF16158.5 ORF40039 - 6.6e-07 30.0 0.0 1.1e-06 29.3 0.0 1.3 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene Spc7_C2 PF15577.6 ORF40039 - 0.089 12.9 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Spc7_C2 LSM PF01423.22 ORF39077 - 1.1e-16 60.3 0.0 1.5e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 ORF39077 - 0.02 15.1 0.0 0.033 14.3 0.0 1.4 1 0 0 1 1 1 0 Ataxin 2 SM domain HECW1_helix PF18436.1 ORF36947 - 0.13 12.4 0.7 1.5 9.0 0.1 2.4 2 0 0 2 2 2 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 YdjM PF04307.14 ORF35396 - 0.098 12.0 4.4 0.13 11.6 4.4 1.3 1 1 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Metal_CEHH PF14455.6 ORF34962 - 0.079 12.6 0.1 0.14 11.8 0.1 1.4 1 0 0 1 1 1 0 Predicted metal binding domain DRIM PF07539.12 ORF34590 - 0.0048 15.3 0.3 1.3 7.2 0.5 2.0 1 1 1 2 2 2 2 Down-regulated in metastasis DUF3678 PF12435.8 ORF3419 - 0.0053 16.1 0.9 0.011 15.1 0.9 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3678) BK_channel_a PF03493.18 ORF32538 - 6.7e-12 45.5 0.0 1.1e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Calcium-activated BK potassium channel alpha subunit UQ_con PF00179.26 ORF32048 - 3.9e-41 140.0 0.0 4.4e-41 139.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF32048 - 0.012 15.4 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B DUF1700 PF08006.11 ORF2680 - 0.61 9.6 4.9 0.79 9.2 4.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) TipE PF16972.5 ORF26017 - 0.4 9.8 5.9 0.51 9.5 5.9 1.2 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE DUF3144 PF11342.8 ORF24726 - 0.094 13.0 0.3 0.22 11.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3144) DBD_HTH PF18430.1 ORF23449 - 0.0014 18.4 0.0 0.0021 17.8 0.0 1.3 1 0 0 1 1 1 1 Putative DNA-binding domain SRP-alpha_N PF04086.13 ORF18935 - 0.71 9.7 18.9 0.8 9.6 18.9 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Lin-8 PF03353.15 ORF18935 - 1.7 8.2 8.1 1.9 8.0 8.1 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Ribosomal_60s PF00428.19 ORF18935 - 7.8 7.2 17.5 1.1 9.9 5.5 3.0 3 0 0 3 3 3 0 60s Acidic ribosomal protein Gtr1_RagA PF04670.12 ORF18606 - 1.2e-21 77.2 0.7 1.7e-21 76.6 0.4 1.4 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Herpes_UL33 PF03581.13 ORF18606 - 0.23 11.8 1.3 3.2 8.2 0.2 2.4 2 1 0 2 2 2 0 Herpesvirus UL33-like protein DUF4774 PF15999.5 ORF18203 - 0.23 11.3 9.5 0.33 10.8 1.3 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4774) zf-RING_UBOX PF13445.6 ORF17638 - 8.9e-07 28.8 14.6 4e-06 26.7 9.3 3.1 2 1 1 3 3 3 1 RING-type zinc-finger zf-RING_2 PF13639.6 ORF17638 - 1.2e-05 25.5 14.4 1.2e-05 25.5 14.4 2.4 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 ORF17638 - 2.5e-05 24.0 16.4 3.1e-05 23.8 11.9 2.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF17638 - 0.0014 18.5 15.3 0.0076 16.2 10.4 2.9 3 1 0 3 3 3 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF17638 - 0.017 15.3 14.5 0.15 12.3 11.3 3.0 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_11 PF17123.5 ORF17638 - 0.094 12.5 17.8 0.064 13.0 7.4 3.0 3 0 0 3 3 3 0 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF17638 - 0.11 12.3 16.9 0.13 12.1 13.3 2.9 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) FYVE PF01363.21 ORF17638 - 6.9 6.9 12.7 1.3e+02 2.8 12.7 2.6 1 1 0 1 1 1 0 FYVE zinc finger Prok-RING_4 PF14447.6 ORF17638 - 7 6.6 17.6 17 5.4 5.4 3.6 2 1 0 3 3 3 0 Prokaryotic RING finger family 4 Albumin_I PF08027.11 ORF17163 - 4.9 6.9 10.5 15 5.3 0.1 3.4 3 0 0 3 3 3 0 Albumin I chain b DUF3694 PF12473.8 ORF16786 - 0.024 15.3 0.2 0.038 14.6 0.2 1.3 1 0 0 1 1 1 0 Kinesin protein BAMBI PF06211.12 ORF16786 - 0.4 10.9 3.6 0.46 10.7 1.9 2.0 1 1 2 3 3 3 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain Mersacidin PF16934.5 ORF16786 - 7.8 6.4 11.3 3 7.7 0.4 3.2 3 1 1 4 4 4 0 Two-component Enterococcus faecalis cytolysin (EFC) ATG16 PF08614.11 ORF15797 - 4.6e-06 27.0 14.2 6.2e-06 26.6 14.2 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF4201 PF13870.6 ORF15797 - 0.00037 20.3 6.0 0.00054 19.7 6.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) FapA PF03961.13 ORF15797 - 0.005 15.5 0.4 0.0052 15.5 0.4 1.1 1 0 0 1 1 1 1 Flagellar Assembly Protein A DUF641 PF04859.12 ORF15797 - 0.0065 16.8 9.2 0.028 14.8 2.3 2.3 1 1 1 2 2 2 1 Plant protein of unknown function (DUF641) KASH_CCD PF14662.6 ORF15797 - 0.0066 16.3 7.6 0.008 16.0 7.6 1.1 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Fib_alpha PF08702.10 ORF15797 - 0.0093 16.2 3.6 0.047 13.9 3.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family OmpH PF03938.14 ORF15797 - 0.011 16.1 3.3 0.021 15.2 3.3 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4005 PF13178.6 ORF15797 - 0.014 16.1 1.5 0.014 16.1 1.5 1.6 2 0 0 2 2 1 0 Protein of unknown function (DUF4005) DUF745 PF05335.13 ORF15797 - 0.017 14.9 3.1 0.026 14.2 3.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF745) SpecificRecomb PF10136.9 ORF15797 - 0.019 13.3 1.8 0.022 13.1 1.8 1.1 1 0 0 1 1 1 0 Site-specific recombinase Csm1_N PF18504.1 ORF15797 - 0.021 15.2 8.6 0.51 10.7 1.6 2.5 1 1 1 2 2 2 0 Csm1 N-terminal domain Spc7 PF08317.11 ORF15797 - 0.021 13.7 6.7 0.028 13.3 6.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein HAUS-augmin3 PF14932.6 ORF15797 - 0.029 14.0 5.4 0.035 13.7 5.4 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Macoilin PF09726.9 ORF15797 - 0.03 12.9 3.1 0.034 12.7 3.1 1.0 1 0 0 1 1 1 0 Macoilin family DASH_Spc34 PF08657.10 ORF15797 - 0.037 13.8 5.0 0.046 13.5 5.0 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 DUF932 PF06067.11 ORF15797 - 0.05 13.4 0.2 0.05 13.4 0.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF932) FAM76 PF16046.5 ORF15797 - 0.057 12.8 7.5 0.076 12.4 7.5 1.3 1 1 0 1 1 1 0 FAM76 protein Atg14 PF10186.9 ORF15797 - 0.091 11.8 8.0 0.11 11.5 8.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PKcGMP_CC PF16808.5 ORF15797 - 0.091 12.6 9.6 0.26 11.2 2.9 2.5 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF812 PF05667.11 ORF15797 - 0.094 11.6 7.7 0.12 11.2 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) IFT57 PF10498.9 ORF15797 - 0.1 11.5 3.9 0.13 11.2 3.9 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Draxin PF15550.6 ORF15797 - 0.14 12.1 4.9 0.16 11.8 4.9 1.1 1 0 0 1 1 1 0 Draxin DUF4200 PF13863.6 ORF15797 - 0.14 12.5 11.5 0.54 10.7 11.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Sec2p PF06428.11 ORF15797 - 0.15 12.0 9.0 0.33 10.9 1.3 2.2 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p CENP-K PF11802.8 ORF15797 - 0.16 11.5 4.3 0.21 11.2 4.3 1.2 1 0 0 1 1 1 0 Centromere-associated protein K Seryl_tRNA_N PF02403.22 ORF15797 - 0.21 11.8 6.0 0.42 10.9 6.0 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Cep57_MT_bd PF06657.13 ORF15797 - 0.22 12.0 6.0 0.58 10.6 6.0 1.8 1 0 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 DUF4407 PF14362.6 ORF15797 - 0.25 10.6 3.6 0.32 10.3 3.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMF_DNA_bd PF12329.8 ORF15797 - 0.32 11.0 10.1 2.4 8.2 1.4 2.4 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding TMPIT PF07851.13 ORF15797 - 0.53 9.5 1.7 0.68 9.1 1.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein FTA4 PF13093.6 ORF15797 - 0.61 9.9 8.7 1.6 8.6 8.8 1.6 1 1 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 YabA PF06156.13 ORF15797 - 0.7 10.6 4.3 2.3 8.9 4.3 1.8 1 1 0 1 1 1 0 Initiation control protein YabA UPF0242 PF06785.11 ORF15797 - 1.1 9.4 10.9 6.4 6.8 10.9 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CENP-H PF05837.12 ORF15797 - 2.4 8.6 9.3 4.7 7.7 9.3 1.4 1 0 0 1 1 1 0 Centromere protein H (CENP-H) HemX PF04375.14 ORF15797 - 3.9 6.7 10.3 0.74 9.0 6.3 1.6 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase HIP1_clath_bdg PF16515.5 ORF15797 - 4.5 8.0 14.4 7.3 7.3 7.4 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Spc24 PF08286.11 ORF15797 - 5.9 7.2 7.3 23 5.3 5.9 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 MatE PF01554.18 ORF15667 - 7.6e-15 54.9 13.1 7.6e-15 54.9 13.1 1.5 2 0 0 2 2 2 1 MatE Arv1 PF04161.13 ORF151266 - 0.57 10.3 5.0 0.78 9.9 5.0 1.1 1 0 0 1 1 1 0 Arv1-like family Salt_tol_Pase PF09506.10 ORF15026 - 0.021 13.6 0.1 0.026 13.3 0.1 1.1 1 0 0 1 1 1 0 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) DUF4600 PF15372.6 ORF15026 - 0.044 14.2 3.1 0.046 14.2 0.8 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4600) UQ_con PF00179.26 ORF144403 - 3.9e-41 140.0 0.0 4.4e-41 139.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF144403 - 0.012 15.4 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B RecA_dep_nuc PF16786.5 ORF134844 - 1.7 8.8 7.8 5.2 7.3 0.2 2.7 3 0 0 3 3 3 0 Recombination enhancement, RecA-dependent nuclease Phage_min_tail PF05939.13 ORF13470 - 0.081 13.3 0.1 0.27 11.6 0.0 1.8 1 1 1 2 2 2 0 Phage minor tail protein Resolvase PF00239.21 ORF13405 - 0.071 13.2 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Resolvase, N terminal domain DNA_pol3_finger PF17657.1 ORF13405 - 0.17 11.2 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial DNA polymerase III alpha subunit finger domain Aldedh PF00171.22 ORF133071 - 1.8e-14 53.1 0.0 2.2e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family MatE PF01554.18 ORF132972 - 0.0024 17.5 0.2 0.0024 17.5 0.2 1.4 2 0 0 2 2 2 1 MatE DUF3045 PF11243.8 ORF13077 - 0.015 15.4 2.9 0.029 14.5 2.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3045) DpnI_C PF17726.1 ORF13077 - 1 9.5 10.8 0.18 11.9 4.7 2.8 1 1 1 3 3 3 0 Dam-replacing HTH domain Keratin_2_head PF16208.5 ORF129276 - 0.099 12.8 25.0 0.11 12.6 25.0 1.2 1 0 0 1 1 1 0 Keratin type II head Securin PF04856.13 ORF127819 - 0.00073 19.6 0.1 0.00092 19.3 0.1 1.1 1 0 0 1 1 1 1 Securin sister-chromatid separation inhibitor DUF3894 PF13033.6 ORF126800 - 0.053 13.6 0.0 0.11 12.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3894) GAPES3 PF17154.4 ORF126800 - 0.094 12.7 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain DUF2475 PF10629.9 ORF126182 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) REPA_OB_2 PF16900.5 ORF12408 - 0.076 12.9 0.0 5.3 7.0 0.0 2.4 1 1 1 2 2 2 0 Replication protein A OB domain zf-TRM13_CCCH PF11722.8 ORF122098 - 0.14 12.0 1.9 0.22 11.3 1.0 1.9 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein DUF5110 PF17137.4 ORF121257 - 0.00072 19.8 0.0 0.0014 18.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) HTS PF04204.16 ORF121257 - 0.13 11.2 0.0 0.17 10.8 0.0 1.1 1 0 0 1 1 1 0 Homoserine O-succinyltransferase TipE PF16972.5 ORF120852 - 0.4 9.8 5.9 0.51 9.5 5.9 1.2 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE SHS2_Rpb7-N PF03876.17 ORF116544 - 2.6e-12 46.9 0.0 3.9e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 ORF116544 - 2.5e-08 34.2 0.0 3.9e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.12 ORF116544 - 5.8e-05 23.3 0.1 0.00012 22.3 0.0 1.6 2 0 0 2 2 2 1 RNA polymerase III subunit Rpc25 Rep_Org_C PF06926.11 ORF115898 - 0.018 15.3 1.3 0.04 14.2 1.3 1.6 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus LuxT_C PF18285.1 ORF114963 - 0.0041 17.6 1.8 0.0045 17.5 0.6 1.6 2 0 0 2 2 2 1 Tetracycline repressor LuxT C-terminal domain WD40 PF00400.32 ORF11496 - 4.9e-06 27.2 0.3 3.3e-05 24.6 0.1 2.2 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF11496 - 0.0019 18.5 0.0 0.012 15.9 0.0 2.3 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain DUF1825 PF08855.10 ORF11455 - 0.063 13.2 0.1 0.088 12.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) DUF2475 PF10629.9 ORF111512 - 0.00016 21.8 0.2 0.00041 20.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) DUF4616 PF15394.6 ORF110810 - 0.13 11.3 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4616) DUF179 PF02622.15 ORF109605 - 1.5e-36 125.8 0.0 1.7e-36 125.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 DUF4141 PF13605.6 ORF109605 - 0.16 11.3 0.1 0.26 10.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4141) MyTH4 PF00784.17 ORF107144 - 2.4 8.7 8.8 1.3 9.5 0.1 3.0 2 1 1 3 3 3 0 MyTH4 domain Helicase_C PF00271.31 ORF107050 - 9.6e-20 71.0 0.1 1.6e-19 70.3 0.1 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain zf-RING_2 PF13639.6 ORF107050 - 0.29 11.5 6.5 0.33 11.3 5.5 1.6 1 1 0 1 1 1 0 Ring finger domain zf-CCCH_7 PF18586.1 ORF104972 - 0.15 12.4 2.3 0.16 12.3 1.1 1.7 2 0 0 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 Globin PF00042.22 ORF1049 - 4e-07 30.6 0.0 6.8e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 Globin DNA_ligase_C PF17879.1 ORF1049 - 1.2e-05 25.3 0.0 1.7e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 DNA ligase C-terminal domain UQ_con PF00179.26 ORF104886 - 3.6e-48 162.8 0.0 4.1e-48 162.6 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF104886 - 0.12 12.6 1.0 0.24 11.7 0.8 2.0 1 1 1 2 2 2 0 RWD domain MID_pPIWI_RE PF18157.1 ORF104759 - 0.021 15.1 1.0 0.033 14.5 0.5 1.8 1 1 1 2 2 2 0 MID domain of pPIWI_RE TPR_7 PF13176.6 ORF102417 - 0.17 12.0 0.0 0.4 10.8 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat Phe_ZIP PF08916.11 ORF102083 - 0.049 14.4 0.0 0.089 13.5 0.0 1.5 1 0 0 1 1 1 0 Phenylalanine zipper DUF543 PF04418.12 NODE_40857_length_505_cov_1.725532_g33345_i0reverse_frame_1 - 0.09 12.8 0.2 0.16 12.0 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF543) Phage_holin_2_3 PF16080.5 NODE_40857_length_505_cov_1.725532_g33345_i0reverse_frame_1 - 0.12 12.2 0.4 0.21 11.4 0.4 1.4 1 0 0 1 1 1 0 Bacteriophage holin family HP1 Exo_endo_phos PF03372.23 NODE_40854_length_505_cov_2.036170_g33342_i0forward_frame_1 - 0.0045 16.5 0.3 0.0069 15.9 0.3 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family AAA_11 PF13086.6 NODE_40851_length_505_cov_2.436170_g33339_i0forward_frame_1 - 1.2 8.8 14.4 1.6 8.5 14.4 1.2 1 0 0 1 1 1 0 AAA domain Hep_59 PF07052.11 NODE_40851_length_505_cov_2.436170_g33339_i0forward_frame_1 - 2.3 9.0 18.2 20 6.0 18.2 2.0 1 1 0 1 1 1 0 Hepatocellular carcinoma-associated antigen 59 DUF1672 PF07901.11 NODE_40845_length_505_cov_3.685106_g33333_i0reverse_frame_1 - 0.017 14.4 3.5 0.023 14.0 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1672) MKT1_N PF12247.8 NODE_40842_length_505_cov_4.197872_g33330_i0reverse_frame_1 - 0.034 14.5 0.0 0.062 13.7 0.0 1.5 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks145.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks145.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks145.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks145.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LacY_symp PF01306.19 NODE_40835_length_505_cov_79.914894_g33323_i0reverse_frame_1 - 0.1 11.4 1.3 0.12 11.1 1.3 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter DUF1115 PF06544.12 NODE_40821_length_505_cov_143.891489_g33309_i0forward_frame_1 - 2.2e-06 27.8 1.0 5.2e-06 26.6 0.0 2.0 2 1 0 2 2 2 1 Protein of unknown function (DUF1115) Bystin PF05291.11 NODE_40799_length_506_cov_2.447983_g33290_i0forward_frame_1 - 0.0081 15.5 0.6 0.011 15.1 0.6 1.1 1 0 0 1 1 1 1 Bystin DUF5366 PF17328.2 NODE_40799_length_506_cov_2.447983_g33290_i0forward_frame_1 - 0.024 14.7 0.9 0.031 14.4 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5366) LolB PF03550.14 NODE_40795_length_506_cov_2.976645_g33286_i0forward_frame_1 - 2.2e-18 66.8 0.2 3.2e-18 66.2 0.2 1.2 1 0 0 1 1 1 1 Outer membrane lipoprotein LolB ROK PF00480.20 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 3.9e-33 115.2 0.0 4.8e-33 114.9 0.0 1.1 1 0 0 1 1 1 1 ROK family Hydant_A_N PF05378.13 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 9.8e-05 22.1 0.2 0.00016 21.4 0.2 1.3 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region Glucokinase PF02685.16 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 0.0038 16.3 0.0 0.0047 16.0 0.0 1.1 1 0 0 1 1 1 1 Glucokinase BcrAD_BadFG PF01869.20 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 0.04 13.4 0.0 0.042 13.3 0.0 1.2 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family DEDD_Tnp_IS110 PF01548.17 NODE_40788_length_506_cov_3.492569_g33279_i0forward_frame_1 - 0.053 13.4 0.0 0.074 12.9 0.0 1.2 1 0 0 1 1 1 0 Transposase HA2 PF04408.23 NODE_40784_length_506_cov_23.218684_g33275_i0forward_frame_1 - 0.099 12.9 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Helicase associated domain (HA2) Acetyltransf_6 PF13480.7 NODE_40784_length_506_cov_23.218684_g33275_i0forward_frame_1 - 0.11 12.6 8.1 0.18 11.9 8.1 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain K1377 PF15352.6 NODE_40776_length_506_cov_72.825902_g33267_i0reverse_frame_1 - 0.0042 15.4 3.3 0.0049 15.2 3.3 1.1 1 0 0 1 1 1 1 Susceptibility to monomelic amyotrophy zf-RING_UBOX PF13445.6 NODE_40774_length_506_cov_84.031847_g33265_i0reverse_frame_1 - 0.0021 18.0 3.4 0.012 15.7 0.4 2.5 2 0 0 2 2 2 2 RING-type zinc-finger 7tm_7 PF08395.12 NODE_40771_length_506_cov_100.456476_g33262_i0forward_frame_1 - 0.037 13.3 0.1 0.074 12.2 0.1 1.4 1 0 0 1 1 1 0 7tm Chemosensory receptor PAAR_motif PF05488.13 NODE_40769_length_506_cov_102.384289_g33260_i0forward_frame_1 - 0.52 10.5 2.4 8 6.7 0.1 2.8 3 0 0 3 3 3 0 PAAR motif PSRT PF07636.11 NODE_40765_length_506_cov_115.738854_g33256_i0forward_frame_1 - 3.5 7.4 16.5 0.77 9.5 4.8 2.7 2 0 0 2 2 2 0 PSRT Notch PF00066.17 NODE_40761_length_506_cov_211.027601_g33252_i0forward_frame_1 - 0.012 16.1 2.9 0.024 15.1 2.9 1.5 1 0 0 1 1 1 0 LNR domain DUF4338 PF14236.6 NODE_40750_length_507_cov_2.298729_g33242_i0reverse_frame_1 - 0.14 11.4 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4338) Cyclin_N PF00134.23 NODE_40727_length_507_cov_96.347458_g33219_i0reverse_frame_1 - 2.5e-08 33.7 0.1 4.9e-08 32.8 0.0 1.6 2 1 0 2 2 2 1 Cyclin, N-terminal domain Tsi6 PF18660.1 NODE_40727_length_507_cov_96.347458_g33219_i0reverse_frame_1 - 0.0073 16.3 0.5 0.025 14.6 0.1 2.1 2 1 0 2 2 2 1 Tsi6 Fucose_iso_N2 PF07882.12 NODE_40727_length_507_cov_96.347458_g33219_i0reverse_frame_1 - 0.12 12.0 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 L-fucose isomerase, second N-terminal domain Microvir_lysis PF04517.12 NODE_40721_length_507_cov_117.506356_g28644_i1reverse_frame_1 - 0.012 15.6 1.6 1.6 8.7 0.3 2.5 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus mTERF PF02536.14 NODE_40721_length_507_cov_117.506356_g28644_i1forward_frame_1 - 1e-15 57.5 0.0 1.2e-15 57.3 0.0 1.1 1 0 0 1 1 1 1 mTERF HTH_3 PF01381.22 NODE_40721_length_507_cov_117.506356_g28644_i1forward_frame_1 - 0.022 14.8 0.0 11 6.1 0.0 3.3 3 0 0 3 3 3 0 Helix-turn-helix HTH_37 PF13744.6 NODE_40721_length_507_cov_117.506356_g28644_i1forward_frame_1 - 0.094 12.7 0.0 4.1 7.4 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain DUF983 PF06170.12 NODE_40714_length_507_cov_203.961864_g33208_i0forward_frame_1 - 3.8 8.0 6.3 50 4.4 0.3 3.4 2 1 0 3 3 3 0 Protein of unknown function (DUF983) RINGv PF12906.7 NODE_40714_length_507_cov_203.961864_g33208_i0forward_frame_1 - 4.5 7.5 11.0 37 4.5 0.1 4.5 3 2 1 4 4 4 0 RING-variant domain zf_C2HC_14 PF18574.1 NODE_40713_length_507_cov_206.016949_g33207_i0reverse_frame_1 - 0.014 15.2 0.0 0.034 13.9 0.0 1.6 1 0 0 1 1 1 0 C2HC Zing finger domain Gin PF10764.9 NODE_40713_length_507_cov_206.016949_g33207_i0reverse_frame_1 - 5.1 7.1 7.4 6.8 6.7 0.7 2.7 3 0 0 3 3 3 0 Inhibitor of sigma-G Gin C6 PF01681.17 NODE_40703_length_507_cov_1655.779661_g30445_i1reverse_frame_1 - 0.022 15.2 1.0 0.036 14.6 1.0 1.2 1 0 0 1 1 1 0 C6 domain DUF2768 PF10966.8 NODE_40699_length_508_cov_1.972516_g33195_i0reverse_frame_3 - 2.9 8.4 17.7 0.19 12.2 11.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2768) YwqJ-deaminase PF14431.6 NODE_40684_length_508_cov_61.890063_g33181_i0reverse_frame_3 - 0.012 15.8 0.8 0.017 15.3 0.8 1.2 1 0 0 1 1 1 0 YwqJ-like deaminase ROK PF00480.20 NODE_40684_length_508_cov_61.890063_g33181_i0reverse_frame_2 - 0.066 12.7 0.4 0.079 12.4 0.4 1.1 1 0 0 1 1 1 0 ROK family CAMSAP_CH PF11971.8 NODE_40681_length_508_cov_84.192389_g33178_i0forward_frame_2 - 0.22 11.4 3.5 6.5 6.7 0.2 2.3 2 0 0 2 2 2 0 CAMSAP CH domain THAP PF05485.12 NODE_40670_length_508_cov_108.980973_g33168_i0forward_frame_3 - 0.066 14.1 0.4 0.1 13.5 0.4 1.4 1 0 0 1 1 1 0 THAP domain CdiI_N PF18228.1 NODE_40668_length_508_cov_115.591966_g33167_i0reverse_frame_2 - 0.058 13.2 0.1 0.11 12.4 0.1 1.4 1 0 0 1 1 1 0 CdiI N-terminal domain Carla_C4 PF01623.17 NODE_40656_length_508_cov_215.162791_g33155_i0reverse_frame_2 - 0.21 11.6 4.3 0.19 11.7 3.1 1.6 1 1 0 1 1 1 0 Carlavirus putative nucleic acid binding protein MT-A70 PF05063.14 NODE_40633_length_509_cov_3.286920_g33134_i0reverse_frame_3 - 2.3e-19 70.0 1.5 1.2e-17 64.3 1.5 2.2 1 1 0 1 1 1 1 MT-A70 RVT_N PF13655.6 NODE_40629_length_509_cov_3.989451_g33130_i0reverse_frame_3 - 0.016 15.4 0.1 0.031 14.5 0.1 1.4 1 0 0 1 1 1 0 N-terminal domain of reverse transcriptase NPBW PF15180.6 NODE_40629_length_509_cov_3.989451_g33130_i0forward_frame_2 - 0.013 15.4 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Neuropeptides B and W DUF5553 PF17707.1 NODE_40629_length_509_cov_3.989451_g33130_i0forward_frame_2 - 0.022 14.2 0.0 0.035 13.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5553) zf-rbx1 PF12678.7 NODE_40622_length_509_cov_70.578059_g33123_i0reverse_frame_3 - 0.02 15.1 2.7 0.041 14.2 2.7 1.5 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_40622_length_509_cov_70.578059_g33123_i0reverse_frame_3 - 0.021 14.6 2.2 0.044 13.6 2.2 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_40622_length_509_cov_70.578059_g33123_i0reverse_frame_3 - 0.048 14.0 3.0 0.096 13.0 3.0 1.5 1 0 0 1 1 1 0 Ring finger domain zf-C3HC4 PF00097.25 NODE_40622_length_509_cov_70.578059_g33123_i0reverse_frame_3 - 0.12 12.3 3.9 0.25 11.2 3.9 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) REC114-like PF15165.6 NODE_40619_length_509_cov_80.993671_g33120_i0forward_frame_3 - 0.076 12.8 4.3 0.095 12.5 4.2 1.2 1 1 0 1 1 1 0 Meiotic recombination protein REC114-like Laminin_EGF PF00053.24 NODE_40619_length_509_cov_80.993671_g33120_i0forward_frame_3 - 0.34 11.1 5.8 0.16 12.2 3.3 1.8 2 0 0 2 2 2 0 Laminin EGF domain Peptidase_S9 PF00326.21 NODE_40618_length_509_cov_81.563291_g33119_i0reverse_frame_3 - 0.00027 20.5 0.0 0.00035 20.1 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF3710 PF12502.8 NODE_40618_length_509_cov_81.563291_g33119_i0reverse_frame_3 - 0.072 12.8 0.1 0.1 12.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3710) Chlorophyllase2 PF12740.7 NODE_40618_length_509_cov_81.563291_g33119_i0reverse_frame_3 - 0.12 11.2 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase enzyme AAA PF00004.29 NODE_40613_length_509_cov_92.898734_g33114_i0reverse_frame_2 - 3.4e-18 66.3 0.1 5.7e-18 65.6 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 NODE_40613_length_509_cov_92.898734_g33114_i0reverse_frame_2 - 0.0051 16.6 0.1 0.0096 15.7 0.1 1.5 1 0 0 1 1 1 1 AAA+ lid domain ICEA PF05315.11 NODE_40613_length_509_cov_92.898734_g33114_i0reverse_frame_2 - 0.007 15.8 0.1 0.038 13.4 0.1 1.9 1 1 1 2 2 2 1 ICEA Protein RecR PF02132.15 NODE_40613_length_509_cov_92.898734_g33114_i0reverse_frame_2 - 0.027 14.0 0.6 0.062 12.9 0.6 1.6 1 0 0 1 1 1 0 RecR protein HpaP PF09483.10 NODE_40613_length_509_cov_92.898734_g33114_i0reverse_frame_2 - 0.041 14.1 0.1 0.095 13.0 0.1 1.6 1 0 0 1 1 1 0 Type III secretion protein (HpaP) Fer4_5 PF12801.7 NODE_40584_length_510_cov_1.562105_g33089_i0forward_frame_3 - 0.0058 16.6 0.0 0.014 15.3 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S binding domain MNR PF15718.5 NODE_40583_length_510_cov_1.709474_g33088_i0forward_frame_2 - 0.0061 14.8 5.3 0.0073 14.5 5.3 1.0 1 0 0 1 1 1 1 Protein moonraker Phage_tail_3 PF08813.11 NODE_40583_length_510_cov_1.709474_g33088_i0forward_frame_2 - 0.086 12.4 0.5 0.12 11.9 0.5 1.3 1 0 0 1 1 1 0 Phage tail tube protein, TTP PSII_Pbs27 PF13326.6 NODE_40583_length_510_cov_1.709474_g33088_i0forward_frame_2 - 0.97 9.7 6.1 2 8.7 5.5 1.9 1 1 1 2 2 2 0 Photosystem II Pbs27 PTS_EIIB PF00367.20 NODE_40581_length_510_cov_2.968421_g33086_i0reverse_frame_3 - 2.6e-16 58.8 0.0 5.6e-16 57.7 0.0 1.6 1 0 0 1 1 1 1 phosphotransferase system, EIIB PRD PF00874.20 NODE_40581_length_510_cov_2.968421_g33086_i0reverse_frame_3 - 0.0017 18.6 0.0 0.006 16.9 0.0 1.8 2 0 0 2 2 2 1 PRD domain Methyltransf_23 PF13489.6 NODE_40580_length_510_cov_3.107368_g33085_i0forward_frame_2 - 3.8e-10 39.8 0.0 5.4e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_40580_length_510_cov_3.107368_g33085_i0forward_frame_2 - 5.4e-09 36.6 0.0 1.2e-08 35.5 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_40580_length_510_cov_3.107368_g33085_i0forward_frame_2 - 1.3e-08 35.3 0.0 4.3e-08 33.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_40580_length_510_cov_3.107368_g33085_i0forward_frame_2 - 4.3e-07 29.8 0.0 4.9e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_40580_length_510_cov_3.107368_g33085_i0forward_frame_2 - 5.4e-06 27.1 0.0 9.1e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain ITI_HC_C PF06668.12 NODE_40578_length_510_cov_3.221053_g33083_i0reverse_frame_2 - 0.11 12.2 2.3 0.11 12.2 0.6 1.7 1 1 1 2 2 2 0 Inter-alpha-trypsin inhibitor heavy chain C-terminus Pep1_7 PF17232.2 NODE_40574_length_510_cov_15.898947_g33079_i0reverse_frame_2 - 0.04 14.4 1.6 0.14 12.7 0.1 2.2 2 0 0 2 2 2 0 Elicitor peptide 1-7 ATP_synt_H PF05493.13 NODE_40573_length_510_cov_18.498947_g33078_i0forward_frame_2 - 0.81 10.2 3.8 1.4 9.4 1.0 2.2 2 0 0 2 2 2 0 ATP synthase subunit H N_NLPC_P60 PF12912.7 NODE_40561_length_510_cov_93.210526_g33066_i0forward_frame_3 - 0.17 12.2 0.0 0.25 11.7 0.0 1.2 1 0 0 1 1 1 0 NLPC_P60 stabilising domain, N term PRMT5_C PF17286.2 NODE_40559_length_510_cov_109.981053_g33064_i0forward_frame_3 - 0.015 15.1 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 PRMT5 oligomerisation domain SMN PF06003.12 NODE_40544_length_510_cov_221.947368_g33050_i0reverse_frame_3 - 0.69 9.1 7.9 1 8.5 7.9 1.2 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) Pep_deformylase PF01327.21 ORF99038 - 1.4e-50 171.0 0.1 1.6e-50 170.8 0.1 1.1 1 0 0 1 1 1 1 Polypeptide deformylase COPI_assoc PF08507.10 ORF98962 - 6.5e-16 58.6 10.3 7.7e-16 58.3 10.3 1.0 1 0 0 1 1 1 1 COPI associated protein SseC PF04888.12 ORF98962 - 0.0036 16.9 4.1 0.0036 16.9 4.1 2.1 2 1 0 2 2 2 1 Secretion system effector C (SseC) like family YtxH PF12732.7 ORF98962 - 0.0042 17.6 0.9 0.007 16.9 0.9 1.4 1 0 0 1 1 1 1 YtxH-like protein SMP_2 PF10144.9 ORF98962 - 0.012 15.3 0.0 0.021 14.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial virulence factor haemolysin SIMPL PF04402.14 ORF98962 - 0.043 14.3 0.7 0.056 13.9 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF541) Papo_T_antigen PF02380.15 ORF98962 - 0.38 10.9 2.6 0.37 11.0 1.0 1.7 1 1 1 2 2 2 0 T-antigen specific domain HK97-gp10_like PF04883.12 ORF98962 - 0.65 11.0 3.6 1.2 10.2 3.6 1.4 1 0 0 1 1 1 0 Bacteriophage HK97-gp10, putative tail-component DUF202 PF02656.15 ORF98962 - 2.7 8.5 12.8 13 6.3 4.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF202) Tctex-1 PF03645.13 ORF98318 - 1.5e-12 47.6 0.0 2.4e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 Tctex-1 family Rz1 PF06085.11 ORF97925 - 0.059 13.1 2.6 0.073 12.8 1.2 2.0 2 0 0 2 2 2 0 Lipoprotein Rz1 precursor DUF4599 PF15371.6 ORF97925 - 0.075 13.6 1.2 4.6 7.9 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4599) EF-hand_1 PF00036.32 ORF94462 - 1.8e-26 89.7 12.3 2.2e-06 26.8 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF94462 - 8.9e-23 80.5 4.3 1.1e-13 51.4 0.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF94462 - 5.6e-20 69.5 7.1 1.3e-05 24.7 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF94462 - 1.9e-19 68.2 12.9 8.8e-05 21.8 0.2 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF94462 - 7.5e-10 38.5 10.7 2e-05 24.3 2.5 4.3 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF94462 - 1.3e-09 38.4 0.4 0.00024 21.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF94462 - 1.1e-05 25.3 5.4 0.025 14.5 1.1 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF94462 - 0.0057 16.9 0.1 0.084 13.2 0.1 2.6 2 1 1 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF94462 - 0.014 15.3 1.0 6.3 6.7 0.0 3.6 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF94462 - 0.019 15.1 4.4 8.7 6.6 4.1 3.2 2 1 0 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF94462 - 0.032 14.4 0.0 4.5 7.6 0.0 3.5 3 1 1 4 4 4 0 Pseudomurein-binding repeat Far-17a_AIG1 PF04750.14 ORF94065 - 0.00016 21.1 16.0 0.00021 20.7 16.0 1.2 1 0 0 1 1 1 1 FAR-17a/AIG1-like protein FANCI_HD2 PF14680.6 ORF93636 - 0.092 12.0 0.1 0.16 11.2 0.1 1.3 1 1 0 1 1 1 0 FANCI helical domain 2 PaaA_PaaC PF05138.12 ORF93636 - 0.11 11.7 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 Phenylacetic acid catabolic protein Bap31 PF05529.12 ORF93290 - 0.24 11.3 3.6 0.36 10.7 2.8 1.8 1 1 1 2 2 2 0 Bap31/Bap29 transmembrane region DUF2120 PF09893.9 ORF91707 - 0.021 14.9 0.5 0.068 13.3 0.0 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) UT PF03253.14 ORF88165 - 0.0061 15.7 1.2 0.0072 15.5 1.2 1.1 1 0 0 1 1 1 1 Urea transporter DUF5022 PF16425.5 ORF87619 - 0.075 12.5 0.0 0.076 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5022) Neur_chan_memb PF02932.16 ORF84750 - 1.5 8.8 6.8 2 8.4 6.8 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Metallothio_5 PF02067.15 ORF80746 - 2.2 8.5 12.5 18 5.5 0.2 2.6 2 0 0 2 2 2 0 Metallothionein family 5 EF-hand_13 PF17958.1 ORF77865 - 0.057 13.2 0.3 0.84 9.5 0.1 2.4 2 1 1 3 3 3 0 EF-hand domain RPAP2_Rtr1 PF04181.13 ORF77865 - 0.08 13.3 0.1 0.15 12.4 0.1 1.4 1 0 0 1 1 1 0 Rtr1/RPAP2 family Ribosomal_S18 PF01084.20 ORF73928 - 1.5e-14 53.9 0.2 2.5e-14 53.2 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein S18 zf-LITAF-like PF10601.9 ORF73829 - 1.4e-10 41.3 13.5 1.9e-10 40.8 13.5 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain VraX PF17412.2 ORF73362 - 0.03 14.0 0.4 0.084 12.5 0.0 1.9 2 0 0 2 2 2 0 Family of unknown function Myb_DNA-bind_3 PF12776.7 ORF73362 - 1.4 10.0 5.8 1.4 10.0 2.0 2.1 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain HPIP_like PF18524.1 ORF71593 - 0.97 9.3 3.5 35 4.3 0.1 3.3 3 0 0 3 3 3 0 High potential iron-sulfur protein like PAS_6 PF08348.11 ORF71468 - 0.057 13.3 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 YheO-like PAS domain RINGv PF12906.7 ORF70735 - 0.14 12.3 1.6 0.26 11.5 0.2 2.1 2 0 0 2 2 2 0 RING-variant domain NADHdh PF00146.21 ORF70319 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF70319 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) PIR PF00399.19 ORF69221 - 0.48 10.0 2.7 0.77 9.4 2.7 1.3 1 0 0 1 1 1 0 Yeast PIR protein repeat MFS_1 PF07690.16 ORF69048 - 7.7e-07 28.3 21.4 9.5e-07 28.1 21.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily O-ag_pol_Wzy PF14296.6 ORF69048 - 0.015 14.0 2.6 0.018 13.7 2.6 1.2 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy DUF412 PF04217.13 ORF69048 - 0.16 11.9 0.7 0.33 10.9 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF412 PKcGMP_CC PF16808.5 ORF68770 - 0.013 15.4 5.4 1 9.3 0.5 2.5 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase HIP1_clath_bdg PF16515.5 ORF68770 - 0.016 15.8 0.2 0.029 15.0 0.2 1.4 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CEP63 PF17045.5 ORF68770 - 0.052 13.4 0.6 0.086 12.7 0.5 1.4 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa BRE1 PF08647.11 ORF68770 - 0.064 13.3 0.2 0.11 12.6 0.2 1.3 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase DUF1192 PF06698.11 ORF68770 - 0.089 12.9 6.7 0.57 10.3 1.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) Prp19 PF08606.11 ORF68770 - 0.1 12.6 2.0 0.19 11.8 1.6 1.7 1 1 0 1 1 1 0 Prp19/Pso4-like MYO10_CC PF16735.5 ORF68770 - 0.22 11.6 4.4 0.53 10.4 0.5 2.5 1 1 1 2 2 2 0 Unconventional myosin-X coiled coil domain FANC_SAP PF18081.1 ORF68770 - 1.1 9.5 5.3 80 3.5 5.3 2.6 1 1 0 1 1 1 0 Fanconi anemia-associated nuclease SAP domain DUF1481 PF07356.12 ORF66728 - 2.8e-40 138.1 1.8 3.4e-40 137.8 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1481) DUF4554 PF15091.6 ORF66372 - 7.5 5.3 7.2 8.7 5.1 7.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) Torus PF16131.5 ORF65095 - 0.0083 16.8 0.5 0.012 16.3 0.5 1.3 1 0 0 1 1 1 1 Torus domain zf-CCCH PF00642.24 ORF65095 - 0.031 14.2 2.5 0.057 13.3 2.5 1.5 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) SK_channel PF03530.14 ORF65055 - 0.18 11.8 2.8 0.32 11.0 2.8 1.3 1 0 0 1 1 1 0 Calcium-activated SK potassium channel Phage_holin_4_2 PF04020.13 ORF65055 - 0.25 12.1 7.8 0.26 12.0 6.8 1.8 1 1 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV Amidase PF01425.21 ORF64974 - 9.7e-06 24.8 0.0 1.1e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 Amidase FeThRed_B PF02943.15 ORF6367 - 0.076 13.0 0.8 1.4 8.9 0.3 2.3 2 0 0 2 2 2 0 Ferredoxin thioredoxin reductase catalytic beta chain Pkinase PF00069.25 ORF63598 - 1.5e-35 122.9 0.0 1.6e-35 122.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63598 - 6.5e-22 78.1 0.0 7.4e-22 77.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF63598 - 6.7e-06 25.6 0.0 2.3e-05 23.9 0.0 1.7 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF63598 - 0.00024 20.0 0.0 0.00029 19.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF63598 - 0.002 17.7 0.1 0.042 13.4 0.1 2.0 2 0 0 2 2 2 1 RIO1 family Kdo PF06293.14 ORF63598 - 0.18 11.2 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF2465 PF10239.9 ORF62924 - 0.0066 15.7 2.3 0.0066 15.7 2.3 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2465) GAT PF03127.14 ORF62924 - 0.027 14.8 0.4 0.054 13.8 0.4 1.5 1 0 0 1 1 1 0 GAT domain DUF4665 PF15679.5 ORF62924 - 6.7 7.4 9.2 1.6 9.4 3.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4665) NOA36 PF06524.12 ORF61463 - 1.4 8.2 5.7 1.9 7.8 5.7 1.2 1 0 0 1 1 1 0 NOA36 protein HPIP_like PF18524.1 ORF59816 - 0.97 9.3 3.5 35 4.3 0.1 3.3 3 0 0 3 3 3 0 High potential iron-sulfur protein like DUF2799 PF10973.8 ORF59399 - 0.11 12.9 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2799) Bap31 PF05529.12 ORF58614 - 0.24 11.3 3.6 0.36 10.7 2.8 1.8 1 1 1 2 2 2 0 Bap31/Bap29 transmembrane region SK_channel PF03530.14 ORF56718 - 0.18 11.8 2.8 0.32 11.0 2.8 1.3 1 0 0 1 1 1 0 Calcium-activated SK potassium channel Phage_holin_4_2 PF04020.13 ORF56718 - 0.25 12.1 7.8 0.26 12.0 6.8 1.8 1 1 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV Cpn60_TCP1 PF00118.24 ORF55332 - 0.17 10.5 0.0 0.2 10.2 0.0 1.1 1 0 0 1 1 1 0 TCP-1/cpn60 chaperonin family XRN_N PF03159.18 ORF54577 - 2.4e-54 184.3 0.1 2.7e-54 184.2 0.1 1.0 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus SRP68 PF16969.5 ORF54577 - 0.019 14.0 0.3 0.37 9.8 0.2 2.0 1 1 1 2 2 2 0 RNA-binding signal recognition particle 68 Caudo_TAP PF02413.17 ORF54577 - 0.045 13.9 0.1 0.064 13.4 0.1 1.2 1 0 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK TrpP PF17099.5 ORF53547 - 0.0013 18.5 1.8 0.0024 17.7 1.8 1.5 1 1 0 1 1 1 1 Tryptophan transporter TrpP F_bP_aldolase PF01116.20 ORF52390 - 2.5e-36 125.6 0.0 2.9e-36 125.4 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Ntox22 PF15527.6 ORF52390 - 0.052 13.6 0.1 0.08 13.0 0.1 1.2 1 0 0 1 1 1 0 Bacterial toxin 22 EF-hand_1 PF00036.32 ORF49963 - 1.8e-26 89.7 12.3 2.2e-06 26.8 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF49963 - 8.9e-23 80.5 4.3 1.1e-13 51.4 0.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF49963 - 5.6e-20 69.5 7.1 1.3e-05 24.7 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF49963 - 1.9e-19 68.2 12.9 8.8e-05 21.8 0.2 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF49963 - 7.5e-10 38.5 10.7 2e-05 24.3 2.5 4.3 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF49963 - 1.3e-09 38.4 0.4 0.00024 21.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF49963 - 1.1e-05 25.3 5.4 0.025 14.5 1.1 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF49963 - 0.0057 16.9 0.1 0.084 13.2 0.1 2.6 2 1 1 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF49963 - 0.014 15.3 1.0 6.3 6.7 0.0 3.6 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF49963 - 0.019 15.1 4.4 8.7 6.6 4.1 3.2 2 1 0 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF49963 - 0.032 14.4 0.0 4.5 7.6 0.0 3.5 3 1 1 4 4 4 0 Pseudomurein-binding repeat DUF2661 PF10860.8 ORF48469 - 0.052 13.7 0.1 0.091 12.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2661) zf-RING_2 PF13639.6 ORF47295 - 4.2e-12 46.2 8.5 4.2e-12 46.2 8.5 1.7 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF47295 - 7.2e-07 29.0 5.4 7.2e-07 29.0 5.4 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF47295 - 2.6e-06 27.0 5.9 2.6e-06 27.0 5.9 2.7 2 1 1 3 3 3 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF47295 - 3.2e-06 27.0 6.3 3.2e-06 27.0 6.3 1.9 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF47295 - 5.2e-06 26.2 7.4 1.1e-05 25.2 7.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF47295 - 8.3e-06 26.0 6.7 1.6e-05 25.0 6.7 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF47295 - 8.4e-06 25.8 3.8 1.6e-05 24.9 3.7 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF47295 - 1.4e-05 25.0 7.1 0.00025 21.0 2.5 2.5 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF47295 - 2.5e-05 24.0 8.2 2.5e-05 24.0 8.2 1.7 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF47295 - 5.3e-05 23.0 6.6 8.9e-05 22.3 6.6 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF47295 - 0.0012 18.4 5.4 0.0024 17.5 5.4 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF47295 - 0.0073 16.4 6.4 0.019 15.1 6.4 1.8 1 1 0 1 1 1 1 RING-variant domain zf-RING_4 PF14570.6 ORF47295 - 0.24 11.2 5.8 0.62 9.9 5.9 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Rtf2 PF04641.12 ORF47295 - 0.53 9.6 2.2 0.72 9.2 0.7 1.9 1 1 1 2 2 2 0 Rtf2 RING-finger PHD PF00628.29 ORF47295 - 0.59 10.1 7.4 0.85 9.6 6.9 1.5 1 1 0 1 1 1 0 PHD-finger zf-C3HC4_4 PF15227.6 ORF47295 - 2.3 8.5 9.2 80 3.5 9.5 2.5 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Prok-RING_1 PF14446.6 ORF47295 - 2.4 8.2 9.1 1.1 9.3 3.6 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-LITAF-like PF10601.9 ORF46294 - 3.7e-14 52.7 10.8 5.7e-14 52.1 10.8 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Mut7-C PF01927.16 ORF46294 - 0.31 11.1 2.9 0.43 10.7 2.9 1.1 1 0 0 1 1 1 0 Mut7-C RNAse domain HypA PF01155.19 ORF46294 - 1.2 9.2 4.6 1.9 8.6 4.6 1.4 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3484 PF11983.8 ORF46294 - 1.3 10.2 6.2 1.9 9.6 5.5 1.7 1 1 0 1 1 1 0 Membrane-attachment and polymerisation-promoting switch DUF2076 PF09849.9 ORF46294 - 9.8 6.1 8.1 13 5.8 8.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) FtsK_SpoIIIE PF01580.18 ORF44921 - 0.031 13.6 0.0 0.039 13.3 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family FLYWCH PF04500.16 ORF4313 - 0.077 13.1 0.1 0.13 12.4 0.1 1.4 1 0 0 1 1 1 0 FLYWCH zinc finger domain FPV060 PF17614.2 ORF4313 - 0.09 12.1 0.2 2.9 7.2 0.0 2.1 2 0 0 2 2 2 0 Viral CC-type chemokine Ribosomal_L27A PF00828.19 ORF39582 - 0.00087 20.0 0.1 0.0018 19.0 0.1 1.5 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L16 PF00252.18 ORF37271 - 1.3e-06 28.4 0.0 1.6e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Flavi_M PF01004.19 ORF36817 - 0.19 11.5 0.1 0.36 10.6 0.1 1.4 1 0 0 1 1 1 0 Flavivirus envelope glycoprotein M PRRSV_Env PF02340.15 ORF35834 - 0.053 12.9 0.0 0.069 12.5 0.0 1.2 1 0 0 1 1 1 0 PRRSV putative envelope protein F-box-like PF12937.7 ORF35834 - 0.17 11.8 0.8 0.38 10.7 0.4 1.8 1 1 0 1 1 1 0 F-box-like EF-hand_1 PF00036.32 ORF35809 - 1.8e-26 89.7 12.3 2.2e-06 26.8 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF35809 - 8.9e-23 80.5 4.3 1.1e-13 51.4 0.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF35809 - 5.6e-20 69.5 7.1 1.3e-05 24.7 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF35809 - 1.9e-19 68.2 12.9 8.8e-05 21.8 0.2 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF35809 - 7.5e-10 38.5 10.7 2e-05 24.3 2.5 4.3 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF35809 - 1.3e-09 38.4 0.4 0.00024 21.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF35809 - 1.1e-05 25.3 5.4 0.025 14.5 1.1 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF35809 - 0.0057 16.9 0.1 0.084 13.2 0.1 2.6 2 1 1 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF35809 - 0.014 15.3 1.0 6.3 6.7 0.0 3.6 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF35809 - 0.019 15.1 4.4 8.7 6.6 4.1 3.2 2 1 0 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF35809 - 0.032 14.4 0.0 4.5 7.6 0.0 3.5 3 1 1 4 4 4 0 Pseudomurein-binding repeat Ank_4 PF13637.6 ORF35412 - 1.1e-14 54.6 0.1 1.7e-12 47.6 0.0 3.4 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF35412 - 1.5e-10 41.5 0.2 2.9e-10 40.6 0.2 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF35412 - 1.8e-10 40.8 0.0 7.7e-08 32.5 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF35412 - 7.5e-10 38.8 0.0 2.5e-05 24.5 0.0 2.9 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF35412 - 1.8e-05 24.8 0.0 0.00034 20.8 0.0 2.8 3 0 0 3 3 3 1 Ankyrin repeat zf-LITAF-like PF10601.9 ORF30988 - 1.5e-10 41.2 23.4 2e-10 40.8 23.4 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain YihI PF04220.12 ORF30758 - 1.7e-54 183.8 13.4 2e-54 183.6 13.4 1.0 1 0 0 1 1 1 1 Der GTPase activator (YihI) UPF0242 PF06785.11 ORF26737 - 0.049 13.7 6.9 0.063 13.4 6.9 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Fib_alpha PF08702.10 ORF26737 - 0.052 13.7 9.8 0.069 13.3 9.8 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family AHSP PF09236.10 ORF26737 - 0.11 13.0 0.1 0.11 13.0 0.1 2.3 2 1 0 2 2 2 0 Alpha-haemoglobin stabilising protein LMBR1 PF04791.16 ORF26737 - 0.12 11.3 0.8 0.14 11.0 0.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Spore_III_AB PF09548.10 ORF26737 - 0.12 12.5 5.4 0.16 12.1 5.4 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) Muted PF14942.6 ORF26737 - 0.19 12.0 10.6 0.27 11.6 10.6 1.3 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Syntaxin-6_N PF09177.11 ORF26737 - 0.68 10.5 8.1 0.37 11.4 4.0 2.0 1 1 1 2 2 2 0 Syntaxin 6, N-terminal ERM PF00769.19 ORF26737 - 0.88 9.3 18.3 1.2 8.9 18.3 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family DUF4062 PF13271.6 ORF26737 - 1.1 9.7 3.6 4.5 7.7 3.6 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4062) OEP PF02321.18 ORF26737 - 1.7 8.5 14.5 1.2 8.9 11.1 1.9 1 1 1 2 2 2 0 Outer membrane efflux protein DUF4407 PF14362.6 ORF26737 - 1.8 7.8 7.4 2.3 7.5 7.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PRKG1_interact PF15898.5 ORF26737 - 2.3 9.2 15.9 0.67 10.9 11.5 1.9 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain CENP-H PF05837.12 ORF26737 - 7 7.1 15.6 14 6.1 15.5 1.6 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DUF2556 PF10831.8 ORF2278 - 4.8 7.2 7.5 3.9 7.5 4.6 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2556) PhrC_PhrF PF11131.8 ORF19106 - 0.069 12.8 0.0 0.2 11.3 0.0 1.7 1 0 0 1 1 1 0 Rap-phr extracellular signalling DIX PF00778.17 ORF18870 - 1e-07 31.7 0.1 1.5e-07 31.1 0.1 1.2 1 0 0 1 1 1 1 DIX domain HEPN_Cthe2314 PF18730.1 ORF18870 - 0.042 13.9 0.0 0.075 13.1 0.0 1.3 1 0 0 1 1 1 0 Cthe_2314-like HEPN GET2 PF08690.10 ORF18870 - 0.11 12.1 0.7 0.16 11.7 0.7 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 Vpu PF00558.19 ORF18057 - 0.0021 17.8 1.4 0.25 11.1 0.2 2.4 2 0 0 2 2 2 2 Vpu protein YgaB PF14182.6 ORF18057 - 0.038 14.4 1.0 0.038 14.4 1.0 2.5 3 1 0 3 3 3 0 YgaB-like protein Cep57_MT_bd PF06657.13 ORF18057 - 0.056 13.9 3.5 0.14 12.6 0.1 2.7 3 0 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 CALCOCO1 PF07888.11 ORF18057 - 0.19 10.5 4.6 0.23 10.3 4.6 1.4 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like DivIC PF04977.15 ORF18057 - 3.4 7.5 8.4 0.31 10.8 2.3 2.2 2 1 1 3 3 3 0 Septum formation initiator Aldo_ket_red PF00248.21 ORF1770 - 7e-27 94.4 0.0 1e-26 93.8 0.0 1.3 1 0 0 1 1 1 1 Aldo/keto reductase family Molydop_binding PF01568.21 ORF1770 - 0.087 12.9 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain HP0268 PF18618.1 ORF16756 - 1.1 9.8 6.9 0.52 10.8 0.5 2.5 1 1 1 2 2 2 0 HP0268 EF-hand_1 PF00036.32 ORF16506 - 1.8e-26 89.7 12.3 2.2e-06 26.8 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF16506 - 8.9e-23 80.5 4.3 1.1e-13 51.4 0.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF16506 - 5.6e-20 69.5 7.1 1.3e-05 24.7 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF16506 - 1.9e-19 68.2 12.9 8.8e-05 21.8 0.2 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF16506 - 7.5e-10 38.5 10.7 2e-05 24.3 2.5 4.3 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF16506 - 1.3e-09 38.4 0.4 0.00024 21.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF16506 - 1.1e-05 25.3 5.4 0.025 14.5 1.1 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF16506 - 0.0057 16.9 0.1 0.084 13.2 0.1 2.6 2 1 1 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF16506 - 0.014 15.3 1.0 6.3 6.7 0.0 3.6 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF16506 - 0.019 15.1 4.4 8.7 6.6 4.1 3.2 2 1 0 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF16506 - 0.032 14.4 0.0 4.5 7.6 0.0 3.5 3 1 1 4 4 4 0 Pseudomurein-binding repeat EF-hand_1 PF00036.32 ORF15715 - 1.8e-26 89.7 12.3 2.2e-06 26.8 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF15715 - 8.9e-23 80.5 4.3 1.1e-13 51.4 0.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF15715 - 5.6e-20 69.5 7.1 1.3e-05 24.7 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF15715 - 1.9e-19 68.2 12.9 8.8e-05 21.8 0.2 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF15715 - 7.5e-10 38.5 10.7 2e-05 24.3 2.5 4.3 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF15715 - 1.3e-09 38.4 0.4 0.00024 21.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF15715 - 1.1e-05 25.3 5.4 0.025 14.5 1.1 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF15715 - 0.0057 16.9 0.1 0.084 13.2 0.1 2.6 2 1 1 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF15715 - 0.014 15.3 1.0 6.3 6.7 0.0 3.6 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF15715 - 0.019 15.1 4.4 8.7 6.6 4.1 3.2 2 1 0 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF15715 - 0.032 14.4 0.0 4.5 7.6 0.0 3.5 3 1 1 4 4 4 0 Pseudomurein-binding repeat Pkinase PF00069.25 ORF151822 - 0.0001 21.8 0.1 0.00016 21.1 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain GM_CSF PF01109.17 ORF151263 - 0.076 13.2 0.1 0.16 12.2 0.1 1.5 1 1 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor DC_STAMP PF07782.13 ORF151120 - 0.15 11.9 0.9 0.22 11.3 0.9 1.4 1 1 0 1 1 1 0 DC-STAMP-like protein Cytochrom_C_2 PF01322.20 ORF148468 - 0.0047 17.8 0.2 2.3 9.1 0.0 2.1 2 0 0 2 2 2 2 Cytochrome C' Scm3 PF10384.9 ORF148468 - 0.096 12.4 4.8 3 7.6 0.3 3.8 4 1 1 5 5 5 0 Centromere protein Scm3 DUF4446 PF14584.6 ORF148468 - 0.12 12.4 4.7 0.13 12.2 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) APC_r PF05923.12 ORF14803 - 0.17 11.7 1.3 0.32 10.8 1.3 1.4 1 0 0 1 1 1 0 APC repeat NADHdh PF00146.21 ORF147891 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF147891 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) FANCI_HD2 PF14680.6 ORF145270 - 0.092 12.0 0.1 0.16 11.2 0.1 1.3 1 1 0 1 1 1 0 FANCI helical domain 2 PaaA_PaaC PF05138.12 ORF145270 - 0.11 11.7 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 Phenylacetic acid catabolic protein DUF1359 PF07097.11 ORF144672 - 0.023 15.0 2.1 0.066 13.5 0.7 2.2 1 1 1 3 3 3 0 Protein of unknown function (DUF1359) CppA_C PF14507.6 ORF144672 - 0.17 12.7 1.8 0.28 12.0 0.7 1.9 2 0 0 2 2 2 0 CppA C-terminal EF-hand_1 PF00036.32 ORF14413 - 1.1e-30 102.9 9.9 4.7e-07 28.9 2.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF14413 - 1.4e-27 95.9 5.5 1.4e-13 51.1 4.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF14413 - 9.9e-26 87.4 4.6 1.1e-06 28.1 0.1 4.4 3 1 1 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF14413 - 3.1e-23 80.2 5.5 2e-06 27.0 0.0 4.4 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF14413 - 5e-19 67.9 8.0 1.2e-06 28.3 0.1 3.5 1 1 3 4 4 4 4 EF-hand domain pair Caleosin PF05042.13 ORF14413 - 2.5e-05 24.3 0.4 0.92 9.4 0.1 3.7 3 1 1 4 4 4 2 Caleosin related protein SPARC_Ca_bdg PF10591.9 ORF14413 - 4.9e-05 23.6 1.9 0.19 12.1 1.7 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF14413 - 0.0002 21.3 5.8 0.14 12.1 1.3 3.5 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_11 PF08976.11 ORF14413 - 0.0015 19.4 0.2 0.015 16.2 0.1 2.1 1 1 1 2 2 2 1 EF-hand domain EF-hand_9 PF14658.6 ORF14413 - 0.0016 18.7 0.3 0.004 17.4 0.2 1.7 2 0 0 2 2 2 1 EF-hand domain PMBR PF09373.10 ORF14413 - 0.087 13.0 0.2 50 4.3 0.0 3.8 4 0 0 4 4 4 0 Pseudomurein-binding repeat RhoGEF67_u1 PF16615.5 ORF143323 - 0.076 13.5 0.2 0.14 12.7 0.2 1.4 1 0 0 1 1 1 0 Unstructured region one on RhoGEF 6 and 7 Fur_reg_FbpB PF13040.6 ORF141829 - 0.053 13.1 0.3 0.053 13.1 0.3 2.7 3 0 0 3 3 3 0 Fur-regulated basic protein B DUF3140 PF11338.8 ORF141829 - 0.37 11.3 2.7 4.7 7.7 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3140) DUF2826 PF11442.8 ORF141065 - 0.045 13.6 1.5 0.068 13.0 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2826) AlaDh_PNT_C PF01262.21 ORF140106 - 0.029 13.6 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain EF-hand_1 PF00036.32 ORF139292 - 1.8e-26 89.7 12.3 2.2e-06 26.8 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF139292 - 8.9e-23 80.5 4.3 1.1e-13 51.4 0.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF139292 - 5.6e-20 69.5 7.1 1.3e-05 24.7 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF139292 - 1.9e-19 68.2 12.9 8.8e-05 21.8 0.2 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF139292 - 7.5e-10 38.5 10.7 2e-05 24.3 2.5 4.3 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF139292 - 1.3e-09 38.4 0.4 0.00024 21.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF139292 - 1.1e-05 25.3 5.4 0.025 14.5 1.1 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF139292 - 0.0057 16.9 0.1 0.084 13.2 0.1 2.6 2 1 1 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF139292 - 0.014 15.3 1.0 6.3 6.7 0.0 3.6 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF139292 - 0.019 15.1 4.4 8.7 6.6 4.1 3.2 2 1 0 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF139292 - 0.032 14.4 0.0 4.5 7.6 0.0 3.5 3 1 1 4 4 4 0 Pseudomurein-binding repeat Pkinase PF00069.25 ORF138475 - 2.7e-34 118.7 0.1 3.1e-34 118.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF138475 - 1.3e-14 54.2 0.0 1.6e-14 53.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF138475 - 0.0023 17.3 0.0 0.0032 16.8 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Dicty_REP PF05086.12 ORF134278 - 1.8 6.5 7.6 2.1 6.3 7.6 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein FAM199X PF15814.5 ORF134278 - 5.8 5.9 8.6 7.6 5.5 8.6 1.1 1 0 0 1 1 1 0 Protein family FAM199X CCSAP PF15748.5 ORF133879 - 0.0014 18.8 3.0 0.0019 18.4 3.0 1.1 1 0 0 1 1 1 1 Centriole, cilia and spindle-associated Suf PF05843.14 ORF133879 - 0.66 9.9 8.9 0.76 9.7 8.9 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) Spt20 PF12090.8 ORF133879 - 1.1 8.8 17.8 1.6 8.3 17.8 1.2 1 0 0 1 1 1 0 Spt20 family Penaeidin PF05927.11 ORF133577 - 0.58 10.9 6.8 1.1 10.0 6.8 1.6 1 1 0 1 1 1 0 Penaeidin TAP_C PF03943.13 ORF133425 - 0.014 15.0 0.7 0.037 13.7 0.7 1.9 1 1 0 1 1 1 0 TAP C-terminal domain DUF4637 PF15470.6 ORF133395 - 8.1 6.1 11.1 13 5.4 11.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) zf-Tim10_DDP PF02953.15 ORF132773 - 1.3e-05 24.8 1.6 3.1e-05 23.5 1.6 1.7 1 0 0 1 1 1 1 Tim10/DDP family zinc finger CSD PF00313.22 ORF13275 - 4.5e-12 45.7 0.2 4.4e-06 26.5 0.0 2.7 2 1 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF13275 - 0.024 14.3 0.0 0.058 13.1 0.0 1.6 1 0 0 1 1 1 0 Ribonuclease B OB domain NADHdh PF00146.21 ORF131132 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF131132 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) DUF2523 PF10734.9 ORF129288 - 0.075 13.6 0.2 0.075 13.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2523) Gyro_capsid PF04162.12 ORF127833 - 0.016 13.7 0.4 0.024 13.1 0.3 1.3 1 1 0 1 1 1 0 Gyrovirus capsid protein (VP1) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks146.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks146.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks146.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks146.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EF-hand_7 PF13499.6 ORF122531 - 2.4e-31 108.0 10.4 2.7e-16 59.7 2.8 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF122531 - 3.2e-31 104.5 15.0 1.1e-08 34.0 1.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF122531 - 5.3e-27 91.4 10.2 2.3e-08 33.3 0.1 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF122531 - 8e-23 80.0 12.9 1.1e-09 38.0 0.7 4.1 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF122531 - 1.1e-14 54.5 0.7 5.2e-07 29.9 0.1 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF122531 - 4.1e-14 51.3 13.6 0.00018 20.9 2.3 4.5 4 0 0 4 4 4 3 EF hand Caleosin PF05042.13 ORF122531 - 7.2e-05 22.8 1.0 2.2 8.2 0.0 3.9 1 1 3 4 4 4 1 Caleosin related protein EF-hand_4 PF12763.7 ORF122531 - 0.00012 22.0 5.8 0.043 13.8 0.1 2.6 1 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_14 PF17959.1 ORF122531 - 0.00019 21.7 1.8 0.33 11.3 0.5 2.5 1 1 0 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF122531 - 0.0037 17.5 2.2 1.1 9.6 0.3 2.2 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region SurA_N_2 PF13623.6 ORF122531 - 0.0041 17.0 1.1 0.25 11.2 0.1 2.5 2 1 0 2 2 2 1 SurA N-terminal domain Gp-FAR-1 PF05823.12 ORF122531 - 0.0087 16.4 3.2 0.54 10.6 0.1 2.8 2 1 1 3 3 3 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) FlgD PF03963.14 ORF122531 - 0.075 13.4 0.1 0.21 11.9 0.0 1.8 2 0 0 2 2 2 0 Flagellar hook capping protein - N-terminal region Dockerin_1 PF00404.18 ORF122531 - 0.2 11.9 2.5 1.7 8.9 0.3 2.6 2 1 1 3 3 3 0 Dockerin type I domain MgtE_N PF03448.17 ORF122531 - 0.33 11.6 3.6 0.69 10.6 1.0 2.3 2 0 0 2 2 2 0 MgtE intracellular N domain HPIP_like PF18524.1 ORF122494 - 0.97 9.3 3.5 35 4.3 0.1 3.3 3 0 0 3 3 3 0 High potential iron-sulfur protein like LRV_FeS PF05484.11 ORF121316 - 0.041 13.9 3.5 0.041 13.9 3.5 1.5 2 0 0 2 2 2 0 LRV protein FeS4 cluster Baseplate_J PF04865.14 ORF121002 - 0.13 11.4 0.2 0.21 10.7 0.2 1.3 1 0 0 1 1 1 0 Baseplate J-like protein Defensin_1 PF00323.19 ORF119265 - 0.11 13.1 0.1 0.23 12.1 0.1 1.6 1 0 0 1 1 1 0 Mammalian defensin Gloverin PF10793.9 ORF119265 - 0.19 11.6 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Gloverin-like protein U1snRNP70_N PF12220.8 ORF117883 - 0.091 13.4 0.3 0.091 13.4 0.3 3.2 2 1 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal zf-LITAF-like PF10601.9 ORF116089 - 1e-15 57.7 8.4 1.3e-15 57.3 8.4 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain PyrI_C PF02748.15 ORF116089 - 0.0085 16.0 4.6 2.7 8.0 0.0 2.5 2 0 0 2 2 2 2 Aspartate carbamoyltransferase regulatory chain, metal binding domain PriA_CRR PF18319.1 ORF116089 - 0.012 15.6 5.9 1.2 9.2 0.8 2.4 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain zf-FCS PF06467.14 ORF116089 - 0.037 14.0 3.0 3.4 7.7 0.1 2.6 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Acyltransferase PF01553.21 ORF114669 - 0.0018 17.9 0.0 0.0028 17.3 0.0 1.2 1 0 0 1 1 1 1 Acyltransferase EF-hand_1 PF00036.32 ORF113810 - 1.8e-26 89.7 12.3 2.2e-06 26.8 0.2 4.6 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF113810 - 8.9e-23 80.5 4.3 1.1e-13 51.4 0.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF113810 - 5.6e-20 69.5 7.1 1.3e-05 24.7 0.1 4.5 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF113810 - 1.9e-19 68.2 12.9 8.8e-05 21.8 0.2 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF113810 - 7.5e-10 38.5 10.7 2e-05 24.3 2.5 4.3 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF113810 - 1.3e-09 38.4 0.4 0.00024 21.4 0.1 2.4 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF113810 - 1.1e-05 25.3 5.4 0.025 14.5 1.1 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF113810 - 0.0057 16.9 0.1 0.084 13.2 0.1 2.6 2 1 1 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF113810 - 0.014 15.3 1.0 6.3 6.7 0.0 3.6 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF113810 - 0.019 15.1 4.4 8.7 6.6 4.1 3.2 2 1 0 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF113810 - 0.032 14.4 0.0 4.5 7.6 0.0 3.5 3 1 1 4 4 4 0 Pseudomurein-binding repeat Nif11 PF07862.11 ORF113128 - 0.025 14.9 0.1 0.072 13.4 0.0 1.8 2 0 0 2 2 2 0 Nif11 domain Pkinase PF00069.25 ORF112969 - 0.00011 21.7 0.1 0.00016 21.1 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain IF2_N PF04760.15 ORF112969 - 0.09 12.6 0.1 0.22 11.4 0.1 1.7 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region zf-CRD PF17979.1 ORF110948 - 3.4e-18 66.2 5.4 3.4e-18 66.2 5.4 1.3 2 0 0 2 2 2 1 Cysteine rich domain with multizinc binding regions zf-CCHH PF10283.9 ORF110948 - 0.0016 18.4 5.0 0.0016 18.4 5.0 2.4 3 0 0 3 3 3 1 PBZ domain Semialdhyde_dhC PF02774.18 ORF11069 - 0.16 12.0 1.8 0.44 10.6 0.0 2.0 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, dimerisation domain NOA36 PF06524.12 ORF11069 - 0.22 10.8 14.4 0.28 10.4 14.4 1.1 1 0 0 1 1 1 0 NOA36 protein Cwf_Cwc_15 PF04889.12 ORF11069 - 0.22 11.2 14.9 0.27 10.9 14.9 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Di19_C PF14571.6 ORF11069 - 6.5 7.3 7.3 1.3 9.6 2.5 2.0 1 1 1 2 2 2 0 Stress-induced protein Di19, C-terminal Prok-E2_A PF14457.6 ORF109602 - 0.062 12.9 0.3 0.11 12.2 0.1 1.5 2 0 0 2 2 2 0 Prokaryotic E2 family A Spt20 PF12090.8 ORF109405 - 0.016 14.8 9.8 0.019 14.6 9.8 1.1 1 0 0 1 1 1 0 Spt20 family TFIIA PF03153.13 ORF109405 - 0.023 14.7 10.4 0.025 14.6 10.4 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit CCDC106 PF15794.5 ORF109405 - 0.027 14.2 4.7 0.036 13.8 4.7 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 DUF1635 PF07795.11 ORF109405 - 0.043 13.7 6.6 0.064 13.1 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) Lin-8 PF03353.15 ORF109405 - 0.068 12.7 7.0 0.074 12.6 7.0 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist V_ATPase_I PF01496.19 ORF109405 - 0.36 8.7 5.3 0.44 8.4 5.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Neur_chan_memb PF02932.16 ORF109405 - 0.44 10.6 4.5 0.55 10.3 4.5 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CLN3 PF02487.17 ORF109405 - 1.1 8.3 3.0 0.95 8.4 2.0 1.4 2 0 0 2 2 2 0 CLN3 protein Presenilin PF01080.17 ORF109405 - 1.5 7.5 8.5 1.9 7.1 8.5 1.1 1 0 0 1 1 1 0 Presenilin DUF3381 PF11861.8 ORF109405 - 7 6.4 10.1 9.2 6.0 10.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) NADHdh PF00146.21 ORF108909 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF108909 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) Aminotran_3 PF00202.21 ORF108284 - 4.9e-46 157.2 0.0 5.4e-46 157.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Actin PF00022.19 ORF108101 - 1.7e-38 132.3 0.0 1.8e-38 132.2 0.0 1.0 1 0 0 1 1 1 1 Actin WW PF00397.26 ORF107345 - 1e-06 28.7 0.4 1e-06 28.7 0.4 2.5 2 0 0 2 2 2 1 WW domain NADHdh PF00146.21 ORF107071 - 7.9e-29 100.9 16.1 8.3e-29 100.8 16.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF4579 PF15158.6 ORF107071 - 0.048 13.4 0.4 0.074 12.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4579) Transpeptidase PF00905.22 ORF106215 - 1e-28 100.5 0.1 1.2e-28 100.2 0.1 1.0 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain Clathrin PF00637.20 ORF106215 - 0.2 11.5 0.0 0.28 11.0 0.0 1.2 1 0 0 1 1 1 0 Region in Clathrin and VPS HpcH_HpaI PF03328.14 ORF104968 - 2.3e-22 79.2 0.1 2.8e-22 79.0 0.1 1.1 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family DUF1737 PF08410.10 ORF101426 - 0.083 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1737) Mating_C PF12737.7 ORF10043 - 0.06 12.6 0.1 0.08 12.2 0.1 1.2 1 0 0 1 1 1 0 C-terminal domain of homeodomain 1 ATP_bind_2 PF03668.15 ORF100292 - 0.0012 18.2 0.0 0.0014 18.0 0.0 1.1 1 0 0 1 1 1 1 P-loop ATPase protein family LRR_4 PF12799.7 NODE_41035_length_502_cov_2.164882_g33508_i0reverse_frame_1 - 0.2 12.2 6.8 0.26 11.8 2.7 2.8 2 1 0 2 2 2 0 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 NODE_41035_length_502_cov_2.164882_g33508_i0reverse_frame_1 - 8.1 6.8 7.5 4.6 7.6 0.4 3.5 4 0 0 4 4 4 0 Leucine Rich repeat Voltage_CLC PF00654.20 NODE_41027_length_502_cov_2.802998_g33500_i0reverse_frame_1 - 9e-30 104.1 14.3 9.7e-30 104.0 14.3 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel Ion_trans PF00520.31 NODE_41026_length_502_cov_2.910064_g33499_i0reverse_frame_1 - 4.9e-15 55.4 6.3 5.3e-15 55.3 6.3 1.0 1 0 0 1 1 1 1 Ion transport protein GPI2 PF06432.11 NODE_41026_length_502_cov_2.910064_g33499_i0forward_frame_1 - 0.069 12.6 2.7 0.051 13.0 1.6 1.4 1 1 1 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase LEA_3 PF03242.13 NODE_41008_length_502_cov_83.342612_g33481_i0reverse_frame_1 - 3.1 8.6 6.2 1.8 9.3 2.8 2.2 2 1 0 2 2 2 0 Late embryogenesis abundant protein bZIP_1 PF00170.21 NODE_41006_length_502_cov_85.950749_g33479_i0reverse_frame_1 - 0.68 10.1 6.0 0.69 10.0 0.0 2.1 2 0 0 2 2 2 0 bZIP transcription factor DUF5345 PF17280.2 NODE_40998_length_502_cov_117.982869_g33472_i0reverse_frame_1 - 5.7 7.0 6.1 13 5.8 0.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5345) FAM199X PF15814.5 NODE_40993_length_502_cov_237.732334_g33468_i0forward_frame_1 - 0.0016 17.5 10.6 0.002 17.3 10.6 1.3 1 0 0 1 1 1 1 Protein family FAM199X Diacid_rec PF05651.13 NODE_40993_length_502_cov_237.732334_g33468_i0forward_frame_1 - 0.0092 15.7 1.9 0.014 15.1 1.6 1.4 1 1 0 1 1 1 1 Putative sugar diacid recognition Adaptin_binding PF10199.9 NODE_40993_length_502_cov_237.732334_g33468_i0forward_frame_1 - 3.6 8.2 13.8 7.2 7.2 13.8 1.7 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 SpoIIIAH PF12685.7 NODE_40993_length_502_cov_237.732334_g33468_i0forward_frame_1 - 7.7 6.3 17.8 11 5.8 17.8 1.2 1 0 0 1 1 1 0 SpoIIIAH-like protein PsbK PF02533.15 NODE_40989_length_502_cov_549.817987_g33465_i0reverse_frame_1 - 3.5e-20 71.9 6.4 7.2e-20 70.9 6.4 1.5 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component RskA PF10099.9 NODE_40989_length_502_cov_549.817987_g33465_i0reverse_frame_1 - 0.43 10.8 3.4 0.63 10.3 3.4 1.2 1 0 0 1 1 1 0 Anti-sigma-K factor rskA MAGE PF01454.19 NODE_40988_length_502_cov_774.678801_g33464_i0reverse_frame_1 - 0.11 12.2 0.5 0.23 11.1 0.3 1.6 2 0 0 2 2 2 0 MAGE family DUF948 PF06103.11 NODE_40979_length_503_cov_1.950855_g33457_i0forward_frame_1 - 0.049 13.9 0.0 0.093 13.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) CENP-Q PF13094.6 NODE_40979_length_503_cov_1.950855_g33457_i0forward_frame_1 - 0.065 13.4 0.0 0.072 13.3 0.0 1.2 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit InaF-motif PF15018.6 NODE_40974_length_503_cov_2.480769_g33452_i0reverse_frame_1 - 0.014 15.3 0.2 0.025 14.5 0.2 1.4 1 0 0 1 1 1 0 TRP-interacting helix Fimbrial PF00419.20 NODE_40969_length_503_cov_2.632479_g33447_i0reverse_frame_1 - 2.9e-09 37.4 0.7 4e-09 36.9 0.7 1.1 1 0 0 1 1 1 1 Fimbrial protein PHY PF00360.20 NODE_40960_length_503_cov_3.613248_g33439_i0reverse_frame_1 - 0.091 12.1 0.1 0.12 11.6 0.1 1.1 1 0 0 1 1 1 0 Phytochrome region Abhydrolase_1 PF00561.20 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 2.5e-17 63.4 0.2 3e-17 63.1 0.2 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 1.1e-11 45.8 1.5 1.3e-11 45.5 1.5 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 2.2e-10 40.2 0.3 2.9e-10 39.8 0.3 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 0.00033 20.9 0.3 0.00042 20.5 0.3 1.1 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_2 PF02230.16 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 0.012 15.4 0.0 0.26 11.1 0.0 2.0 1 1 0 2 2 2 0 Phospholipase/Carboxylesterase Ndr PF03096.14 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 0.038 12.7 0.0 0.046 12.4 0.0 1.1 1 0 0 1 1 1 0 Ndr family Esterase PF00756.20 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_1 - 0.24 11.0 1.0 0.98 9.0 0.3 2.0 1 1 1 2 2 2 0 Putative esterase Svf1_C PF17187.4 NODE_40955_length_503_cov_39.081197_g33434_i0forward_frame_1 - 0.059 13.2 0.5 0.082 12.7 0.5 1.2 1 0 0 1 1 1 0 Svf1-like C-terminal lipocalin-like domain Toxin_28 PF08115.11 NODE_40935_length_503_cov_107.175214_g33415_i0reverse_frame_1 - 0.068 13.1 0.5 0.17 11.7 0.5 1.6 1 0 0 1 1 1 0 SFI toxin family EF-hand_7 PF13499.6 NODE_40920_length_503_cov_345.155983_g33400_i0reverse_frame_1 - 4.5e-14 52.6 0.9 5e-07 30.1 0.2 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 NODE_40920_length_503_cov_345.155983_g33400_i0reverse_frame_1 - 6e-14 50.5 3.3 1.5e-06 27.3 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_40920_length_503_cov_345.155983_g33400_i0reverse_frame_1 - 2e-13 50.0 2.2 7.8e-07 28.8 0.2 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_40920_length_503_cov_345.155983_g33400_i0reverse_frame_1 - 3.6e-09 35.8 1.3 0.0076 16.1 0.1 3.4 3 1 1 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 NODE_40920_length_503_cov_345.155983_g33400_i0reverse_frame_1 - 0.00026 20.3 7.3 0.0041 16.6 0.4 2.7 2 1 1 3 3 3 2 EF hand DUF1086 PF06461.11 NODE_40920_length_503_cov_345.155983_g33400_i0reverse_frame_1 - 0.13 12.1 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1086) EF-hand_4 PF12763.7 NODE_40920_length_503_cov_345.155983_g33400_i0reverse_frame_1 - 0.27 11.2 3.5 7.2 6.6 1.1 2.1 1 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand RNaseH_like PF04308.12 NODE_40920_length_503_cov_345.155983_g33400_i0forward_frame_1 - 0.074 13.0 0.0 0.12 12.2 0.0 1.3 1 1 0 1 1 1 0 Ribonuclease H-like PsaD PF02531.16 NODE_40912_length_503_cov_4621.553419_g33395_i0reverse_frame_1 - 1e-41 141.7 0.4 1.4e-41 141.2 0.4 1.2 1 0 0 1 1 1 1 PsaD DnaJ PF00226.31 NODE_40908_length_504_cov_2.204691_g33391_i0reverse_frame_1 - 0.067 13.3 0.1 0.16 12.1 0.1 1.7 1 0 0 1 1 1 0 DnaJ domain Trypan_glycop PF00913.19 NODE_40908_length_504_cov_2.204691_g33391_i0reverse_frame_1 - 0.12 11.6 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 Trypanosome variant surface glycoprotein (A-type) HSP70 PF00012.20 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_1 - 1.3e-07 30.2 2.2 1.8e-07 29.7 2.2 1.2 1 0 0 1 1 1 1 Hsp70 protein FKBP_N PF01346.18 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_1 - 0.0046 17.9 7.5 0.0074 17.2 7.5 1.3 1 0 0 1 1 1 1 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Phage_Mu_F PF04233.14 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_1 - 0.031 15.0 1.6 0.048 14.4 1.6 1.3 1 0 0 1 1 1 0 Phage Mu protein F like protein Coat_F PF07875.12 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_1 - 0.49 10.7 3.1 0.77 10.0 3.1 1.3 1 0 0 1 1 1 0 Coat F domain NAD-GH PF10712.9 NODE_40905_length_504_cov_2.724947_g33388_i0forward_frame_1 - 2.7e-05 22.8 0.2 3.3e-05 22.6 0.2 1.1 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Herpeto_peptide PF14409.6 NODE_40873_length_504_cov_221.441365_g33356_i0forward_frame_1 - 0.4 10.9 10.7 0.72 10.1 1.2 2.4 1 1 1 2 2 2 0 Ribosomally synthesized peptide in Herpetosiphon TILa PF12714.7 NODE_40873_length_504_cov_221.441365_g33356_i0forward_frame_1 - 5.6 7.0 16.8 0.75 9.8 4.8 3.2 2 1 1 3 3 3 0 TILa domain VGLL4 PF15245.6 NODE_40873_length_504_cov_221.441365_g33356_i0forward_frame_1 - 8.1 6.4 9.0 10 6.1 9.0 1.3 1 0 0 1 1 1 0 Transcription cofactor vestigial-like protein 4 MBOAT PF03062.19 NODE_40867_length_504_cov_1096.400853_g33350_i0reverse_frame_1 - 3.2e-18 66.2 8.5 3.9e-18 65.9 8.5 1.0 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family SelA PF03841.13 NODE_40856_length_505_cov_1.755319_g33344_i0forward_frame_3 - 0.14 11.1 2.9 0.26 10.2 0.5 1.9 1 1 1 2 2 2 0 L-seryl-tRNA selenium transferase GAS2 PF02187.17 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 0.00013 22.0 0.1 0.00025 21.1 0.1 1.5 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain Med4 PF10018.9 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 0.038 13.7 3.3 0.051 13.2 3.3 1.3 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF724 PF05266.14 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 0.25 11.1 3.4 0.35 10.7 3.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 1.9 8.5 8.9 5.7 7.0 8.9 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF1515 PF07439.11 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 2 8.5 6.2 1.9 8.5 1.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) zf-C4H2 PF10146.9 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 7.8 6.8 11.8 12 6.2 11.8 1.3 1 1 0 1 1 1 0 Zinc finger-containing protein Cep57_CLD_2 PF14197.6 NODE_40853_length_505_cov_2.044681_g33341_i0forward_frame_3 - 9.1 6.5 12.2 0.68 10.1 1.3 2.8 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 Fer4_4 PF12800.7 NODE_40851_length_505_cov_2.436170_g33339_i0reverse_frame_3 - 1.5 9.5 7.7 7.5 7.3 7.7 2.2 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_40851_length_505_cov_2.436170_g33339_i0reverse_frame_3 - 5.7 7.2 9.6 1.2 9.4 4.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain NAD_binding_1 PF00175.21 NODE_40849_length_505_cov_2.791489_g33337_i0forward_frame_3 - 2.7e-09 37.7 0.0 4.6e-08 33.7 0.0 2.1 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 NODE_40849_length_505_cov_2.791489_g33337_i0forward_frame_3 - 1.1e-05 25.6 0.2 0.011 15.8 0.1 2.3 1 1 1 2 2 2 2 Ferric reductase NAD binding domain LysR_substrate PF03466.20 NODE_40848_length_505_cov_2.806383_g33336_i0forward_frame_2 - 8.7e-18 64.4 0.1 1e-17 64.2 0.1 1.0 1 0 0 1 1 1 1 LysR substrate binding domain YycC PF14174.6 NODE_40846_length_505_cov_3.308511_g33334_i0forward_frame_3 - 0.032 14.0 0.0 0.058 13.2 0.0 1.4 1 0 0 1 1 1 0 YycC-like protein Cortexin PF11057.8 NODE_40845_length_505_cov_3.685106_g33333_i0forward_frame_2 - 0.0081 16.0 0.8 0.018 14.9 0.8 1.5 1 0 0 1 1 1 1 Cortexin of kidney EF-hand_6 PF13405.6 NODE_40835_length_505_cov_79.914894_g33323_i0forward_frame_2 - 0.00028 20.6 0.0 0.012 15.5 0.0 2.5 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 NODE_40835_length_505_cov_79.914894_g33323_i0forward_frame_2 - 0.00082 19.8 0.0 0.062 13.8 0.0 2.5 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_40835_length_505_cov_79.914894_g33323_i0forward_frame_2 - 0.0028 17.1 0.0 0.013 15.0 0.0 2.1 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 NODE_40835_length_505_cov_79.914894_g33323_i0forward_frame_2 - 0.0069 15.8 0.1 0.034 13.6 0.0 2.1 2 0 0 2 2 2 1 EF hand Methyltransf_11 PF08241.12 NODE_40817_length_505_cov_208.291489_g33305_i0reverse_frame_3 - 2.3e-10 41.0 0.0 3.5e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_40817_length_505_cov_208.291489_g33305_i0reverse_frame_3 - 9.4e-08 32.7 0.0 1.5e-07 32.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_40817_length_505_cov_208.291489_g33305_i0reverse_frame_3 - 7.2e-07 29.1 0.0 8e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_40817_length_505_cov_208.291489_g33305_i0reverse_frame_3 - 0.0011 19.6 0.0 0.0016 19.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 NODE_40817_length_505_cov_208.291489_g33305_i0reverse_frame_3 - 0.016 14.5 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CaMKII_AD PF08332.10 NODE_40800_length_506_cov_2.259023_g33291_i0forward_frame_3 - 0.059 13.5 0.2 0.083 13.0 0.2 1.2 1 0 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II association domain LAGLIDADG_1 PF00961.19 NODE_40798_length_506_cov_2.666667_g33289_i0reverse_frame_2 - 0.42 11.6 3.8 0.23 12.5 1.5 1.7 2 0 0 2 2 2 0 LAGLIDADG endonuclease XPB_DRD PF18458.1 NODE_40788_length_506_cov_3.492569_g33279_i0reverse_frame_3 - 0.13 12.1 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain FLYWCH PF04500.16 NODE_40788_length_506_cov_3.492569_g33279_i0reverse_frame_2 - 9.6 6.4 7.9 0.72 10.0 0.9 2.1 2 0 0 2 2 2 0 FLYWCH zinc finger domain Dickkopf_N PF04706.12 NODE_40786_length_506_cov_4.036093_g33277_i0reverse_frame_3 - 1.3 9.6 9.1 2.7 8.5 9.1 1.4 1 0 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region Lin-8 PF03353.15 NODE_40781_length_506_cov_63.329087_g33272_i0reverse_frame_3 - 0.099 12.2 12.4 0.13 11.9 12.4 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist DUF2486 PF10667.9 NODE_40781_length_506_cov_63.329087_g33272_i0reverse_frame_3 - 0.95 9.6 13.4 1.2 9.3 13.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2486) Suf PF05843.14 NODE_40781_length_506_cov_63.329087_g33272_i0reverse_frame_3 - 3.5 7.5 10.1 5.8 6.8 10.1 1.3 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) CDC45 PF02724.14 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 0.02 13.2 3.4 0.017 13.4 3.4 1.1 1 0 0 1 1 1 0 CDC45-like protein TRAP_alpha PF03896.16 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 0.37 10.0 5.3 0.44 9.7 5.3 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Pox_Ag35 PF03286.14 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 1.4 8.6 12.0 2 8.2 12.0 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Presenilin PF01080.17 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 1.5 7.5 4.0 1.5 7.5 4.0 1.1 1 0 0 1 1 1 0 Presenilin NOA36 PF06524.12 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 1.7 7.9 10.7 0.93 8.8 8.2 1.7 2 0 0 2 2 2 0 NOA36 protein GEN1_C PF18380.1 NODE_40775_length_506_cov_74.265393_g33266_i0forward_frame_2 - 4.1 8.3 10.6 7.8 7.5 10.6 1.5 1 0 0 1 1 1 0 Holliday junction resolvase Gen1 C-terminal domain DUF2417 PF10329.9 NODE_40773_length_506_cov_85.866242_g33264_i0reverse_frame_3 - 6.7 6.0 14.3 3.4 7.0 11.0 2.0 1 1 1 2 2 2 0 Region of unknown function (DUF2417) H2O2_YaaD PF03883.14 NODE_40765_length_506_cov_115.738854_g33256_i0reverse_frame_2 - 5.2e-15 55.6 0.0 7.1e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 Peroxide stress protein YaaA Gp49 PF05973.14 NODE_40761_length_506_cov_211.027601_g33252_i0reverse_frame_3 - 0.079 13.1 0.1 0.17 12.1 0.2 1.4 2 0 0 2 2 2 0 Phage derived protein Gp49-like (DUF891) ABC_tran PF00005.27 NODE_40761_length_506_cov_211.027601_g33252_i0reverse_frame_2 - 6.2e-09 36.5 0.1 1.4e-08 35.4 0.0 1.6 2 1 0 2 2 2 1 ABC transporter SMC_N PF02463.19 NODE_40761_length_506_cov_211.027601_g33252_i0reverse_frame_2 - 0.00016 21.2 0.1 0.00024 20.6 0.1 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 NODE_40761_length_506_cov_211.027601_g33252_i0reverse_frame_2 - 0.011 15.9 2.1 0.38 11.0 2.1 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TMEM247 PF15444.6 NODE_40759_length_506_cov_296.626327_g33250_i0forward_frame_3 - 7.3 6.6 5.6 11 6.0 5.6 1.3 1 0 0 1 1 1 0 Transmembrane protein 247 Transglut_core PF01841.19 NODE_40752_length_507_cov_2.031780_g33244_i0reverse_frame_3 - 0.055 13.9 0.1 0.21 12.0 0.0 1.8 2 0 0 2 2 2 0 Transglutaminase-like superfamily Defensin_beta PF00711.19 NODE_40752_length_507_cov_2.031780_g33244_i0reverse_frame_3 - 0.13 12.3 0.9 0.13 12.3 0.9 2.9 3 0 0 3 3 3 0 Beta defensin ParBc PF02195.18 NODE_40752_length_507_cov_2.031780_g33244_i0forward_frame_3 - 4.8e-09 36.4 0.0 9.8e-09 35.4 0.0 1.5 1 0 0 1 1 1 1 ParB-like nuclease domain PapC_N PF13954.6 NODE_40742_length_507_cov_3.288136_g33234_i0forward_frame_3 - 7.7e-24 84.4 0.1 1.1e-23 83.9 0.1 1.2 1 0 0 1 1 1 1 PapC N-terminal domain Usher PF00577.20 NODE_40742_length_507_cov_3.288136_g33234_i0forward_frame_3 - 1.5e-06 27.4 0.1 2.5e-06 26.6 0.1 1.3 1 0 0 1 1 1 1 Outer membrane usher protein Biopterin_H PF00351.21 NODE_40741_length_507_cov_3.341102_g33233_i0reverse_frame_3 - 0.0063 15.6 0.4 0.0082 15.2 0.4 1.1 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase PhetRS_B1 PF18262.1 NODE_40741_length_507_cov_3.341102_g33233_i0reverse_frame_3 - 0.082 13.1 0.5 0.19 12.0 0.4 1.6 2 0 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain T_cell_tran_alt PF15128.6 NODE_40737_length_507_cov_4.338983_g33229_i0forward_frame_2 - 0.2 11.5 1.0 0.33 10.8 1.0 1.4 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF863 PF05904.11 NODE_40732_length_507_cov_79.379237_g33224_i0reverse_frame_2 - 0.29 9.5 1.2 0.39 9.1 1.2 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) TRP PF06011.12 NODE_40725_length_507_cov_99.690678_g33217_i0reverse_frame_2 - 6.2e-05 21.9 3.7 9.1e-05 21.4 3.7 1.3 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF996 PF06195.13 NODE_40725_length_507_cov_99.690678_g33217_i0reverse_frame_2 - 0.13 12.5 3.0 0.18 12.1 3.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF996) TctB PF07331.11 NODE_40725_length_507_cov_99.690678_g33217_i0reverse_frame_2 - 0.22 11.8 6.6 3.4 7.9 6.6 2.1 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family DUF2070 PF09843.9 NODE_40725_length_507_cov_99.690678_g33217_i0reverse_frame_2 - 0.23 9.7 3.3 0.27 9.5 3.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MgtE PF01769.16 NODE_40725_length_507_cov_99.690678_g33217_i0reverse_frame_2 - 2.5 8.5 8.3 22 5.5 8.3 2.0 1 1 0 1 1 1 0 Divalent cation transporter Bowman-Birk_leg PF00228.20 NODE_40721_length_507_cov_117.506356_g28644_i1forward_frame_3 - 0.027 14.9 2.4 0.027 14.9 2.4 2.5 3 0 0 3 3 3 0 Bowman-Birk serine protease inhibitor family AMPK1_CBM PF16561.5 NODE_40718_length_507_cov_152.542373_g33212_i0reverse_frame_2 - 0.17 12.1 0.3 0.31 11.3 0.0 1.6 2 0 0 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase Ras PF00071.22 NODE_40716_length_507_cov_183.737288_g33210_i0forward_frame_2 - 7.1e-11 42.0 0.0 8.7e-11 41.7 0.0 1.1 1 0 0 1 1 1 1 Ras family HalX PF08663.10 NODE_40714_length_507_cov_203.961864_g33208_i0reverse_frame_3 - 0.15 12.4 0.5 14 6.1 0.1 2.1 2 0 0 2 2 2 0 HalX domain zf-RING_6 PF14835.6 NODE_40714_length_507_cov_203.961864_g33208_i0reverse_frame_2 - 1.2 9.1 7.7 6.6 6.7 0.6 2.3 1 1 1 2 2 2 0 zf-RING of BARD1-type protein FNIP PF05725.12 NODE_40714_length_507_cov_203.961864_g33208_i0forward_frame_3 - 7.4e-30 102.9 8.8 6.2e-12 45.5 0.3 3.6 2 1 0 3 3 3 3 FNIP Repeat Glyco_hydro_65C PF03633.15 NODE_40714_length_507_cov_203.961864_g33208_i0forward_frame_3 - 1 9.3 4.5 2.3e+02 1.8 0.1 4.9 6 0 0 6 6 6 0 Glycosyl hydrolase family 65, C-terminal domain mono-CXXC PF15626.6 NODE_40714_length_507_cov_203.961864_g33208_i0forward_frame_3 - 5.2 7.5 9.3 10 6.6 1.5 2.2 1 1 1 2 2 2 0 single CXXC unit FNIP PF05725.12 NODE_40714_length_507_cov_203.961864_g33208_i0forward_frame_2 - 5.5e-18 64.9 4.1 3.8e-11 43.0 0.4 2.0 1 1 1 2 2 2 2 FNIP Repeat DUF3272 PF11676.8 NODE_40713_length_507_cov_206.016949_g33207_i0forward_frame_2 - 0.07 13.4 1.3 0.13 12.5 1.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3272) ACT PF01842.25 NODE_40711_length_507_cov_221.258475_g33205_i0reverse_frame_3 - 0.17 11.7 0.0 0.31 10.9 0.0 1.4 1 0 0 1 1 1 0 ACT domain DUF2080 PF09853.9 NODE_40711_length_507_cov_221.258475_g33205_i0reverse_frame_3 - 0.19 11.5 0.0 0.34 10.7 0.0 1.4 1 0 0 1 1 1 0 Putative transposon-encoded protein (DUF2080) DUF2752 PF10825.8 NODE_40711_length_507_cov_221.258475_g33205_i0reverse_frame_2 - 0.27 11.3 0.3 0.27 11.3 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) Tim17 PF02466.19 ORF9942 - 0.045 14.1 1.8 0.95 9.9 1.1 2.5 2 1 1 3 3 3 0 Tim17/Tim22/Tim23/Pmp24 family LapA_dom PF06305.11 ORF9942 - 0.056 13.3 6.8 0.17 11.7 0.2 3.6 3 1 1 4 4 4 0 Lipopolysaccharide assembly protein A domain PSII PF00421.19 ORF9942 - 0.097 11.3 0.4 0.09 11.4 0.4 1.1 1 0 0 1 1 1 0 Photosystem II protein PhaG_MnhG_YufB PF03334.14 ORF9942 - 4.8 7.5 9.0 16 5.8 9.0 1.9 1 1 0 1 1 1 0 Na+/H+ antiporter subunit DUF2157 PF09925.9 ORF9942 - 4.9 6.9 7.7 17 5.2 7.8 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) zf-C3HC4_3 PF13920.6 ORF96450 - 0.0023 17.8 6.3 0.0023 17.8 6.3 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) TetR_C_5 PF08360.11 ORF96450 - 0.0064 16.7 0.4 0.011 15.9 0.4 1.4 1 0 0 1 1 1 1 QacR-like protein, C-terminal region zf-RING_UBOX PF13445.6 ORF96450 - 1.3 9.1 9.8 0.24 11.4 5.5 2.0 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_5 PF14634.6 ORF96450 - 3.2 7.8 15.0 0.16 12.0 8.4 2.1 2 0 0 2 2 2 0 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF96450 - 3.7 7.5 11.4 0.23 11.4 6.0 1.8 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF96450 - 4.5 7.5 14.4 0.55 10.4 7.5 2.5 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING VESA1_N PF12785.7 ORF95860 - 5.5 5.8 20.2 6.3 5.7 20.2 1.1 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Tup_N PF08581.10 ORF95176 - 0.0014 18.9 4.2 0.0014 18.9 4.2 2.9 1 1 2 3 3 3 1 Tup N-terminal CEP63 PF17045.5 ORF95176 - 0.0017 18.3 3.7 0.0017 18.3 3.7 2.1 2 0 0 2 2 2 1 Centrosomal protein of 63 kDa Abp2 PF09441.10 ORF95176 - 0.049 13.7 1.0 0.061 13.4 1.0 1.2 1 0 0 1 1 1 0 ARS binding protein 2 DUF489 PF04356.12 ORF95176 - 0.17 11.9 3.5 0.23 11.4 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF489) Mucin15 PF15672.5 ORF95176 - 0.34 10.3 6.2 0.14 11.6 1.4 1.9 1 1 1 2 2 2 0 Cell-membrane associated Mucin15 Sgf11_N PF18519.1 ORF95176 - 0.57 9.8 3.0 0.34 10.5 0.5 1.9 2 0 0 2 2 2 0 SAGA-associated factor 11 N-terminal domain DUF4446 PF14584.6 ORF95176 - 1 9.3 9.6 0.1 12.6 2.9 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF4446) UPF0242 PF06785.11 ORF95176 - 7.4 6.6 16.4 24 5.0 16.4 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus NPV_P10 PF05531.12 ORF94551 - 0.045 14.2 0.3 0.47 10.9 0.0 2.2 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Smr PF01713.21 ORF92496 - 5.5e-08 33.1 0.0 1.2e-07 32.0 0.0 1.7 1 1 0 1 1 1 1 Smr domain DUF2577 PF10844.8 ORF92496 - 0.09 13.0 0.8 0.14 12.4 0.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2577) IN_DBD_C PF00552.21 ORF92428 - 0.027 13.8 0.0 0.072 12.4 0.0 1.7 1 0 0 1 1 1 0 Integrase DNA binding domain DUF2631 PF10939.8 ORF92166 - 0.13 12.2 2.1 0.66 9.9 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2631) LptF_LptG PF03739.14 ORF90594 - 9.6e-21 74.0 2.4 1.2e-20 73.7 2.4 1.1 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG DUF4870 PF09685.10 ORF90594 - 0.49 10.5 5.0 2.3 8.4 4.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4870) zf-LITAF-like PF10601.9 ORF89711 - 3.9 7.8 9.4 0.63 10.3 3.7 2.3 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain Trimer_CC PF08954.11 ORF89526 - 0.11 12.0 0.1 0.11 12.0 0.1 1.8 2 0 0 2 2 2 0 Trimerisation motif MtrG PF04210.13 ORF89526 - 0.23 11.3 0.3 0.23 11.3 0.3 2.0 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G Cep57_CLD PF14073.6 ORF88248 - 0.18 11.8 2.4 0.15 12.1 1.0 1.5 2 0 0 2 2 2 0 Centrosome localisation domain of Cep57 Cyclin_N PF00134.23 ORF8641 - 2.1e-05 24.3 0.8 3.3e-05 23.6 0.1 1.7 2 0 0 2 2 2 1 Cyclin, N-terminal domain ACR_tran PF00873.19 ORF8641 - 0.05 11.3 0.1 0.06 11.0 0.1 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF4116 PF13475.6 ORF85396 - 0.046 13.4 0.8 0.12 12.1 0.8 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) Cytidylate_kin2 PF13189.6 ORF85396 - 0.069 13.3 0.2 0.11 12.6 0.2 1.3 1 0 0 1 1 1 0 Cytidylate kinase-like family SVWC PF15430.6 ORF83516 - 0.18 12.1 0.0 0.18 12.1 0.0 2.5 2 1 1 3 3 3 0 Single domain von Willebrand factor type C Mito_carr PF00153.27 ORF82087 - 1.3e-06 28.2 0.0 2.1e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 Mitochondrial carrier protein Fijivirus_P9-2 PF06837.11 ORF79840 - 2.1 7.8 8.4 2.1 7.8 0.6 2.1 2 0 0 2 2 2 0 Fijivirus P9-2 protein Ribonuc_L-PSP PF01042.21 ORF76854 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Filo_VP24 PF06389.11 ORF76362 - 0.073 12.6 3.3 0.15 11.6 1.7 1.8 1 1 0 2 2 2 0 Filovirus membrane-associated protein VP24 Exop_C PF18559.1 ORF76362 - 0.15 11.9 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Galactose-binding domain-like CoA_trans PF01144.23 ORF730 - 2.4e-21 76.2 0.1 3.7e-21 75.5 0.1 1.3 1 1 0 1 1 1 1 Coenzyme A transferase AcetylCoA_hyd_C PF13336.6 ORF730 - 7e-05 22.8 0.0 9.5e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Acetyl-CoA hydrolase/transferase C-terminal domain CBFD_NFYB_HMF PF00808.23 ORF72007 - 2.2e-14 53.5 0.4 3.8e-14 52.7 0.4 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF72007 - 3.2e-10 40.5 0.3 7.9e-10 39.2 0.3 1.6 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-X PF09415.10 ORF72007 - 0.063 13.6 0.0 0.12 12.8 0.0 1.5 1 1 0 1 1 1 0 CENP-S associating Centromere protein X Pro_isomerase PF00160.21 ORF71481 - 2.4e-42 144.9 0.0 2.7e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Adenine_glyco PF03352.13 ORF71314 - 0.044 13.6 0.0 0.077 12.8 0.0 1.4 1 1 0 1 1 1 0 Methyladenine glycosylase NADHdh PF00146.21 ORF68075 - 4.9e-27 95.0 9.8 5.5e-27 94.9 9.8 1.0 1 0 0 1 1 1 1 NADH dehydrogenase DUF2809 PF10990.8 ORF68075 - 0.042 14.5 8.9 2.6 8.8 0.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF2809) DUF2062 PF09835.9 ORF68054 - 0.024 14.5 0.0 0.032 14.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Pox_A3L PF05288.11 ORF67769 - 0.23 11.5 2.0 0.7 9.9 0.4 2.2 2 0 0 2 2 2 0 Poxvirus A3L Protein DUF772 PF05598.11 ORF67406 - 0.079 13.0 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Transposase domain (DUF772) ANAPC4_WD40 PF12894.7 ORF66415 - 5e-05 23.5 0.1 0.37 11.1 0.1 2.6 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF66415 - 0.00024 21.8 0.5 1.1 10.3 0.1 3.4 3 0 0 3 3 3 1 WD domain, G-beta repeat eIF2A PF08662.11 ORF66415 - 0.0025 17.7 0.3 0.0096 15.8 0.3 1.8 1 1 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A Coatomer_WDAD PF04053.14 ORF66415 - 0.0037 16.4 0.1 0.0043 16.2 0.1 1.0 1 0 0 1 1 1 1 Coatomer WD associated region PALB2_WD40 PF16756.5 ORF66415 - 0.007 15.3 0.0 0.0089 15.0 0.0 1.1 1 0 0 1 1 1 1 Partner and localizer of BRCA2 WD40 domain Redoxin PF08534.10 ORF66043 - 7e-32 110.2 0.1 8.4e-32 109.9 0.1 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 ORF66043 - 7.7e-16 58.1 0.0 9.3e-16 57.9 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family BTG PF07742.12 ORF6266 - 0.16 11.8 0.7 0.23 11.3 0.6 1.4 1 1 0 1 1 1 0 BTG family Pro_isomerase PF00160.21 ORF58427 - 2.4e-42 144.9 0.0 2.7e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MCM3AP_GANP PF16769.5 ORF57801 - 0.013 13.8 0.2 0.018 13.4 0.2 1.1 1 0 0 1 1 1 0 MCM3AP domain of GANP DEDD_Tnp_IS110 PF01548.17 ORF57792 - 0.097 12.5 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Transposase CrgA PF06781.12 ORF56505 - 0.04 14.0 0.0 0.06 13.4 0.0 1.2 1 0 0 1 1 1 0 Cell division protein CrgA DUF3040 PF11239.8 ORF56505 - 0.089 13.1 0.3 2.2 8.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) Pkinase PF00069.25 ORF54125 - 1.8e-52 178.3 0.0 1.9e-52 178.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF54125 - 7.9e-35 120.4 0.0 8.6e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF54125 - 1.9e-06 27.4 0.0 4e-06 26.3 0.0 1.6 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF54125 - 2.1e-05 23.5 0.0 2.6e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF54125 - 4.4e-05 22.9 0.1 5.9e-05 22.5 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF54125 - 0.00077 19.4 0.0 0.0013 18.7 0.0 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF54125 - 0.0029 16.6 0.1 0.0035 16.3 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain FTA2 PF13095.6 ORF54125 - 0.0065 16.1 0.1 0.0075 15.9 0.1 1.2 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Seadorna_VP7 PF07387.11 ORF54125 - 0.013 14.5 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 SWIB PF02201.18 ORF54125 - 0.027 14.3 0.7 0.64 10.0 0.2 2.3 2 0 0 2 2 2 0 SWIB/MDM2 domain XLF PF09302.11 ORF54125 - 0.097 12.8 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component ThaI PF15514.6 ORF54125 - 0.12 12.0 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease ThaI Nucleotid_trans PF03407.16 ORF53686 - 0.0072 16.3 0.0 0.0097 15.9 0.0 1.3 1 0 0 1 1 1 1 Nucleotide-diphospho-sugar transferase zf-Sec23_Sec24 PF04810.15 ORF53536 - 0.024 14.7 2.1 2.2 8.4 1.2 2.8 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger MORN PF02493.20 ORF52436 - 1.6e-05 24.5 14.8 0.051 13.5 0.3 5.1 6 0 0 6 6 6 3 MORN repeat UDG PF03167.19 ORF45004 - 1.5e-24 86.8 0.0 1.7e-24 86.6 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Pan_kinase PF03309.14 ORF43487 - 0.095 12.5 0.2 0.13 12.0 0.2 1.2 1 0 0 1 1 1 0 Type III pantothenate kinase DUF2150 PF09920.9 ORF42906 - 0.0012 18.8 0.1 0.0023 17.9 0.1 1.5 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) EF-hand_6 PF13405.6 ORF42906 - 0.036 14.0 0.3 0.24 11.4 0.0 2.5 3 0 0 3 3 3 0 EF-hand domain zf-CCCH_6 PF18585.1 ORF42906 - 0.058 13.3 0.2 12 5.8 0.1 2.8 2 1 1 3 3 3 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 DUF1367 PF07105.11 ORF42906 - 0.12 12.0 0.1 0.19 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1367) EamA PF00892.20 ORF38764 - 0.002 18.3 8.2 0.0024 18.0 8.2 1.1 1 0 0 1 1 1 1 EamA-like transporter family EF-hand_7 PF13499.6 ORF38665 - 9.9e-18 64.4 2.4 4.3e-11 43.1 0.7 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF38665 - 3.7e-14 51.1 6.0 8.4e-08 31.2 0.3 4.6 5 0 0 5 5 5 3 EF hand EF-hand_6 PF13405.6 ORF38665 - 8.9e-13 47.1 4.2 6.2e-06 25.7 0.1 4.4 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF38665 - 3.1e-08 33.3 5.3 5.7e-07 29.3 1.0 3.4 3 1 0 3 3 3 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF38665 - 2.8e-06 26.6 1.2 3.2e-05 23.2 0.1 3.0 3 0 0 3 3 3 1 EF hand SPARC_Ca_bdg PF10591.9 ORF38665 - 0.00015 22.0 0.0 0.09 13.1 0.0 2.2 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF38665 - 0.00056 19.8 1.6 0.78 9.7 0.1 2.6 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF38665 - 0.014 15.7 0.0 0.21 12.0 0.0 2.5 3 0 0 3 3 3 0 EF-hand domain EF-hand_13 PF17958.1 ORF38665 - 0.035 13.9 0.0 19 5.2 0.0 3.4 3 1 1 4 4 4 0 EF-hand domain Peptidase_M7 PF02031.16 ORF38665 - 0.047 13.8 0.0 0.081 13.0 0.0 1.3 1 0 0 1 1 1 0 Streptomyces extracellular neutral proteinase (M7) family SCA7 PF08313.12 ORF37756 - 0.17 11.8 3.5 5.7 6.9 0.2 2.5 2 0 0 2 2 2 0 SCA7, zinc-binding domain TBP PF00352.21 ORF37722 - 9.4e-06 25.5 0.5 2.4e-05 24.2 0.1 1.9 2 0 0 2 2 2 1 Transcription factor TFIID (or TATA-binding protein, TBP) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks147.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks147.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks147.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks147.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pro_isomerase PF00160.21 ORF33224 - 8.3e-39 133.4 0.0 9.3e-39 133.2 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ku PF02735.16 ORF29075 - 5.7e-15 55.6 0.0 8e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 Ku70/Ku80 beta-barrel domain Ku_C PF03730.14 ORF29075 - 3.4e-13 50.1 0.2 6.3e-13 49.2 0.0 1.5 2 0 0 2 2 2 1 Ku70/Ku80 C-terminal arm Pro-kuma_activ PF09286.11 ORF29075 - 0.027 14.8 0.0 0.035 14.4 0.0 1.3 1 0 0 1 1 1 0 Pro-kumamolisin, activation domain FAM209 PF15206.6 ORF27759 - 0.1 12.4 2.6 0.14 12.0 0.7 1.9 2 0 0 2 2 2 0 FAM209 family SspP PF08179.12 ORF27135 - 0.082 13.4 0.3 23 5.5 0.1 2.7 2 0 0 2 2 2 0 Small acid-soluble spore protein P family GST_C_2 PF13410.6 ORF21441 - 2.2e-08 34.0 0.1 3.7e-08 33.3 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Acetyltransf_1 PF00583.25 ORF21276 - 8.4e-05 22.8 0.0 0.00013 22.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF21276 - 8.7e-05 22.9 0.0 0.00015 22.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF21276 - 0.00066 19.6 0.0 0.0012 18.8 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF21276 - 0.02 14.9 0.0 0.062 13.3 0.0 1.8 2 0 0 2 2 2 0 FR47-like protein PanZ PF12568.8 ORF21276 - 0.08 12.7 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ DUF3188 PF11384.8 ORF20955 - 0.29 10.9 2.3 1.7 8.4 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3188) ADIP PF11559.8 ORF20125 - 0.0088 16.1 16.6 0.0088 16.1 16.6 2.6 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding FliT PF05400.13 ORF20125 - 0.025 15.4 3.7 0.025 15.4 3.7 2.7 1 1 1 2 2 2 0 Flagellar protein FliT Fez1 PF06818.15 ORF20125 - 1.3 9.5 22.8 5 7.5 22.6 1.8 1 1 1 2 2 2 0 Fez1 DUF1635 PF07795.11 ORF20125 - 5.8 6.7 13.8 0.89 9.4 8.9 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1635) Spc7 PF08317.11 ORF20125 - 5.9 5.7 27.3 8 5.2 6.1 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein Ribonuc_L-PSP PF01042.21 ORF19917 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP cNMP_binding PF00027.29 ORF19505 - 4.3e-11 42.7 0.0 9.5e-11 41.6 0.0 1.5 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain DHO_dh PF01180.21 ORF18986 - 1.2e-11 44.3 0.0 1.6e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase IMPDH PF00478.25 ORF18986 - 0.0095 15.0 0.0 0.012 14.6 0.0 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 ORF18986 - 0.011 14.8 1.6 0.015 14.3 1.5 1.4 1 1 0 1 1 1 0 FMN-dependent dehydrogenase NMO PF03060.15 ORF18986 - 0.016 14.6 0.3 0.019 14.4 0.3 1.1 1 0 0 1 1 1 0 Nitronate monooxygenase His_biosynth PF00977.21 ORF18986 - 0.019 14.4 0.1 0.027 14.0 0.1 1.3 1 0 0 1 1 1 0 Histidine biosynthesis protein HTH_8 PF02954.19 ORF18986 - 6.9 6.6 6.3 4 7.3 0.1 2.6 3 0 0 3 3 3 0 Bacterial regulatory protein, Fis family Pro_isomerase PF00160.21 ORF16332 - 2.4e-42 144.9 0.0 2.7e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ribonuc_L-PSP PF01042.21 ORF152704 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Pro_isomerase PF00160.21 ORF145697 - 5.5e-50 169.7 0.7 6.1e-50 169.6 0.7 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ribonuc_L-PSP PF01042.21 ORF145458 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Spt20 PF12090.8 ORF144602 - 0.022 14.4 0.0 0.03 14.0 0.0 1.2 1 0 0 1 1 1 0 Spt20 family KIX_2 PF16987.5 ORF144602 - 0.082 12.9 0.1 0.97 9.5 0.0 2.1 2 0 0 2 2 2 0 KIX domain O-antigen_lig PF13425.6 ORF14445 - 6.9e-05 21.8 0.1 8.7e-05 21.5 0.1 1.2 1 0 0 1 1 1 1 O-antigen ligase like membrane protein Connexin PF00029.19 ORF14445 - 0.0016 18.2 0.5 0.0033 17.2 0.0 1.6 1 1 1 2 2 2 1 Connexin UPF0242 PF06785.11 ORF14445 - 0.0099 16.0 0.1 0.015 15.4 0.1 1.3 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Wzy_C PF04932.15 ORF14445 - 0.011 15.4 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 O-Antigen ligase V_ATPase_I PF01496.19 ORF14445 - 0.031 12.2 0.0 0.034 12.1 0.0 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TMEM192 PF14802.6 ORF14445 - 0.037 13.1 0.1 0.037 13.1 0.1 1.5 2 0 0 2 2 2 0 TMEM192 family DUF3810 PF12725.7 ORF14445 - 0.04 13.3 0.1 0.043 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Col_cuticle_N PF01484.17 ORF14445 - 0.1 12.7 0.4 0.1 12.7 0.4 2.4 2 1 0 2 2 2 0 Nematode cuticle collagen N-terminal domain Ctr PF04145.15 ORF14445 - 0.15 12.7 4.4 0.62 10.7 2.6 2.2 1 1 1 2 2 2 0 Ctr copper transporter family Orthoreo_P10 PF07204.11 ORF14445 - 5.2 7.1 9.2 0.82 9.7 1.4 2.1 1 1 1 2 2 2 0 Orthoreovirus membrane fusion protein p10 CAP_assoc_N PF14504.6 ORF14405 - 0.0026 17.5 6.4 0.012 15.4 1.5 2.3 1 1 1 2 2 2 2 CAP-associated N-terminal PBC PF03792.13 ORF14405 - 0.021 14.6 5.0 0.031 14.1 5.0 1.4 1 1 0 1 1 1 0 PBC domain Phage_lysozyme PF00959.19 ORF144015 - 6.9e-33 113.4 0.2 8.6e-33 113.1 0.2 1.1 1 0 0 1 1 1 1 Phage lysozyme Regnase_1_C PF18561.1 ORF142099 - 0.12 12.2 0.4 0.22 11.3 0.4 1.4 1 0 0 1 1 1 0 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain DUF1480 PF07351.13 ORF140657 - 1.7e-37 127.6 0.0 2.4e-37 127.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1480) TBCA PF02970.16 ORF139683 - 0.0047 17.2 2.6 0.0085 16.4 2.6 1.5 1 0 0 1 1 1 1 Tubulin binding cofactor A Bac_GDH PF05088.12 ORF139683 - 0.07 10.6 0.0 0.076 10.5 0.0 1.1 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase zf-B_box PF00643.24 ORF139683 - 0.29 11.3 4.1 0.61 10.3 4.1 1.6 1 0 0 1 1 1 0 B-box zinc finger PolC_DP2 PF03833.13 ORF139683 - 6.1 4.6 6.8 6.6 4.5 6.8 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF4796 PF16044.5 ORF139212 - 0.15 11.6 4.7 0.22 11.1 4.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4796) DUF3450 PF11932.8 ORF139000 - 0.0028 17.0 1.0 0.0042 16.4 1.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) DUF1824 PF08854.10 ORF139000 - 0.025 14.5 0.1 0.042 13.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1824) GPS2_interact PF15784.5 ORF139000 - 0.028 14.9 0.0 0.06 13.8 0.0 1.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain zf-C3HC4 PF00097.25 ORF137183 - 0.36 10.7 4.2 3.8 7.5 1.6 2.7 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) C2 PF00168.30 ORF135414 - 1.1e-15 57.7 0.0 2.7e-15 56.5 0.0 1.5 1 1 1 2 2 2 1 C2 domain PAP_fibrillin PF04755.12 ORF134937 - 0.00021 21.3 0.0 0.0031 17.5 0.0 2.0 1 1 0 1 1 1 1 PAP_fibrillin SVWC PF15430.6 ORF134707 - 0.18 12.1 0.0 0.18 12.1 0.0 2.5 2 1 1 3 3 3 0 Single domain von Willebrand factor type C Pro_isomerase PF00160.21 ORF132469 - 2.4e-42 144.9 0.0 2.7e-42 144.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AlaE PF06610.13 ORF131545 - 1.2e-66 223.1 6.3 1.4e-66 222.8 6.3 1.0 1 0 0 1 1 1 1 L-alanine exporter ATPase_gene1 PF09527.10 ORF131545 - 0.0049 17.0 0.4 0.018 15.2 0.1 2.1 2 0 0 2 2 2 1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter LapA_dom PF06305.11 ORF131545 - 0.16 11.8 1.7 1.8 8.4 0.0 2.5 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain DUF1129 PF06570.11 ORF131545 - 0.49 9.9 2.8 0.6 9.6 0.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) SGL PF08450.12 ORF130361 - 1e-06 28.6 0.0 0.0013 18.3 0.0 2.1 1 1 1 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region PQQ PF01011.21 ORF130361 - 8.2e-05 22.3 0.2 1.1 9.3 0.0 3.4 3 0 0 3 3 3 2 PQQ enzyme repeat PQQ_2 PF13360.6 ORF130361 - 0.00092 18.9 0.1 0.0034 17.0 0.1 1.6 1 1 1 2 2 2 1 PQQ-like domain Cytochrom_D1 PF02239.16 ORF130361 - 0.0031 16.1 0.2 0.052 12.1 0.0 2.1 1 1 0 2 2 2 1 Cytochrome D1 heme domain Lactonase PF10282.9 ORF130361 - 0.0091 15.3 0.3 0.21 10.8 0.1 2.3 1 1 0 2 2 2 1 Lactonase, 7-bladed beta-propeller MRJP PF03022.16 ORF130361 - 0.018 14.4 0.2 0.56 9.5 0.0 2.1 2 0 0 2 2 2 0 Major royal jelly protein ANAPC4_WD40 PF12894.7 ORF130361 - 0.024 14.9 0.1 24 5.3 0.0 3.4 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain MMPL PF03176.15 ORF130361 - 0.07 12.1 0.3 0.078 11.9 0.3 1.1 1 0 0 1 1 1 0 MMPL family DUF5579 PF17742.1 ORF128589 - 0.048 13.2 0.8 0.064 12.8 0.2 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5579) Connexin40_C PF16791.5 ORF124826 - 0.00041 21.6 4.5 0.014 16.6 1.2 2.1 1 1 1 2 2 2 2 Connexin 40 C-terminal domain zf-RING_2 PF13639.6 ORF120714 - 7.3e-10 39.0 3.7 7.3e-10 39.0 3.7 1.9 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF120714 - 2.6e-08 33.5 4.7 2.6e-08 33.5 4.7 3.1 3 1 0 3 3 3 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF120714 - 2.1e-06 27.5 3.9 6.3e-06 25.9 3.9 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF120714 - 1.8e-05 24.6 3.6 1.8e-05 24.6 3.6 1.6 2 0 0 2 2 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF120714 - 2.3e-05 24.2 4.9 2.3e-05 24.2 4.9 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF120714 - 0.00014 22.1 2.5 0.00014 22.1 2.5 2.3 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF120714 - 0.00021 21.2 0.2 0.00021 21.2 0.2 2.1 2 1 0 2 2 2 1 RING-type zinc-finger TMEM154 PF15102.6 ORF120714 - 0.00053 19.9 1.5 0.00069 19.5 1.5 1.2 1 0 0 1 1 1 1 TMEM154 protein family Prok-RING_4 PF14447.6 ORF120714 - 0.0016 18.2 4.2 0.0016 18.2 4.2 1.7 2 0 0 2 2 1 1 Prokaryotic RING finger family 4 EphA2_TM PF14575.6 ORF120714 - 0.0018 19.1 0.1 0.0031 18.3 0.1 1.4 1 0 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain SID-1_RNA_chan PF13965.6 ORF120714 - 0.0048 15.4 0.8 0.0048 15.4 0.8 1.5 1 1 1 2 2 2 1 dsRNA-gated channel SID-1 WBP-1 PF11669.8 ORF120714 - 0.0063 17.1 0.3 0.011 16.3 0.3 1.5 1 0 0 1 1 1 1 WW domain-binding protein 1 PHD PF00628.29 ORF120714 - 0.0067 16.3 2.4 0.0067 16.3 2.4 2.1 2 0 0 2 2 2 1 PHD-finger TMEM51 PF15345.6 ORF120714 - 0.0073 16.2 0.1 0.0096 15.8 0.1 1.2 1 0 0 1 1 1 1 Transmembrane protein 51 zf-ANAPC11 PF12861.7 ORF120714 - 0.0084 16.1 2.4 0.023 14.7 2.4 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 ORF120714 - 0.015 15.1 2.3 0.027 14.3 2.3 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit DAG1 PF05454.11 ORF120714 - 0.021 14.2 0.1 0.028 13.8 0.1 1.2 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) Shisa PF13908.6 ORF120714 - 0.022 15.0 2.0 0.024 14.9 1.1 1.5 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator SCIMP PF15050.6 ORF120714 - 0.033 14.7 1.4 0.087 13.3 0.5 1.9 1 1 1 2 2 2 0 SCIMP protein TMEM52 PF14979.6 ORF120714 - 0.037 13.9 0.1 0.054 13.4 0.1 1.3 1 0 0 1 1 1 0 Transmembrane 52 zf-HC5HC2H_2 PF13832.6 ORF120714 - 0.04 14.1 6.6 0.066 13.4 5.1 2.2 1 1 1 2 2 2 0 PHD-zinc-finger like domain Zn_ribbon_17 PF17120.5 ORF120714 - 0.06 13.0 4.2 0.18 11.4 4.1 1.8 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type DUF5527 PF17665.1 ORF120714 - 0.062 12.8 0.0 0.095 12.2 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5527) DUF3827 PF12877.7 ORF120714 - 0.065 11.6 0.2 0.083 11.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Prok-RING_1 PF14446.6 ORF120714 - 0.07 13.1 1.2 0.67 9.9 0.1 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Sigma_reg_N PF13800.6 ORF120714 - 0.18 12.1 0.7 0.38 11.1 0.2 1.9 1 1 2 3 3 3 0 Sigma factor regulator N-terminal Zf_RING PF16744.5 ORF120714 - 2.3 8.4 6.2 1.1 9.4 1.2 2.7 1 1 2 3 3 3 0 KIAA1045 RING finger zf-C3HC4_3 PF13920.6 ORF120714 - 2.5 8.0 10.6 0.15 11.9 4.9 1.9 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-UDP PF14569.6 ORF120714 - 4.1 7.6 8.5 0.17 12.0 2.0 1.9 2 1 0 2 2 2 0 Zinc-binding RING-finger FANCL_C PF11793.8 ORF120714 - 9.2 6.5 9.2 2 8.7 4.9 2.1 2 1 0 2 2 1 0 FANCL C-terminal domain Phe_ZIP PF08916.11 ORF117944 - 1.1 10.0 11.0 6.8 7.5 1.3 3.2 2 1 1 3 3 3 0 Phenylalanine zipper Cellulase PF00150.18 ORF11696 - 6.8e-05 22.4 0.4 9.1e-05 22.0 0.4 1.2 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) CC PF04942.14 ORF113746 - 0.054 13.7 2.3 0.054 13.7 2.3 2.1 2 0 0 2 2 2 0 CC domain Ribonuc_L-PSP PF01042.21 ORF11317 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Hepatitis_core PF00906.20 ORF113104 - 5.5 6.5 12.2 7.4 6.1 12.2 1.2 1 0 0 1 1 1 0 Hepatitis core antigen Proton_antipo_M PF00361.20 ORF1105 - 8.6e-13 48.1 2.6 8.6e-13 48.1 2.6 1.6 1 1 0 1 1 1 1 Proton-conducting membrane transporter CopD PF05425.13 ORF1105 - 0.0039 17.6 6.9 0.34 11.3 3.9 2.1 2 0 0 2 2 2 2 Copper resistance protein D DUF4389 PF14333.6 ORF1105 - 0.47 10.4 0.1 0.47 10.4 0.1 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4389) DUF4083 PF13314.6 ORF1105 - 1.8 8.6 5.7 2.3 8.2 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) O-antigen_lig PF13425.6 ORF108161 - 6.9e-05 21.8 0.1 8.7e-05 21.5 0.1 1.2 1 0 0 1 1 1 1 O-antigen ligase like membrane protein Connexin PF00029.19 ORF108161 - 0.0016 18.2 0.5 0.0033 17.2 0.0 1.6 1 1 1 2 2 2 1 Connexin UPF0242 PF06785.11 ORF108161 - 0.0099 16.0 0.1 0.015 15.4 0.1 1.3 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Wzy_C PF04932.15 ORF108161 - 0.011 15.4 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 O-Antigen ligase V_ATPase_I PF01496.19 ORF108161 - 0.031 12.2 0.0 0.034 12.1 0.0 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TMEM192 PF14802.6 ORF108161 - 0.037 13.1 0.1 0.037 13.1 0.1 1.5 2 0 0 2 2 2 0 TMEM192 family DUF3810 PF12725.7 ORF108161 - 0.04 13.3 0.1 0.043 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Col_cuticle_N PF01484.17 ORF108161 - 0.1 12.7 0.4 0.1 12.7 0.4 2.4 2 1 0 2 2 2 0 Nematode cuticle collagen N-terminal domain Ctr PF04145.15 ORF108161 - 0.15 12.7 4.4 0.62 10.7 2.6 2.2 1 1 1 2 2 2 0 Ctr copper transporter family Orthoreo_P10 PF07204.11 ORF108161 - 5.2 7.1 9.2 0.82 9.7 1.4 2.1 1 1 1 2 2 2 0 Orthoreovirus membrane fusion protein p10 Ribonuc_L-PSP PF01042.21 ORF104526 - 1.8e-26 92.6 0.0 2.3e-26 92.2 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP Phlebovirus_G1 PF07243.11 NODE_41200_length_499_cov_36.049569_g33659_i0reverse_frame_1 - 1.1 7.5 6.6 1.5 7.1 6.6 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Lamprin PF06403.11 NODE_41191_length_499_cov_102.224138_g33650_i0forward_frame_1 - 0.0019 18.1 9.5 0.0028 17.6 9.5 1.3 1 0 0 1 1 1 1 Lamprin DUF3618 PF12277.8 NODE_41181_length_499_cov_179.127155_g33640_i0forward_frame_1 - 0.35 11.2 0.3 0.35 11.2 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3618) DUF4124 PF13511.6 NODE_41174_length_499_cov_245.773707_g33634_i0reverse_frame_1 - 0.4 11.0 7.0 8.7 6.8 0.4 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4124) BTK PF00779.19 NODE_41174_length_499_cov_245.773707_g33634_i0reverse_frame_1 - 2.7 7.9 15.4 11 6.0 0.5 3.4 3 0 0 3 3 3 0 BTK motif Prok-RING_2 PF14445.6 NODE_41174_length_499_cov_245.773707_g33634_i0forward_frame_1 - 1.5 9.1 20.4 2.1 8.6 1.7 3.9 3 1 1 4 4 4 0 Prokaryotic RING finger family 2 zf-TAZ PF02135.16 NODE_41174_length_499_cov_245.773707_g33634_i0forward_frame_1 - 4.5 7.8 14.0 2.6 8.6 0.4 3.1 2 1 0 2 2 2 0 TAZ zinc finger Ldh_1_N PF00056.23 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_1 - 7.5e-28 97.4 0.1 9.8e-28 97.0 0.1 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Gly_kinase PF02595.15 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_1 - 0.0094 15.0 0.0 0.012 14.6 0.0 1.1 1 0 0 1 1 1 1 Glycerate kinase family Semialdhyde_dh PF01118.24 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_1 - 0.074 13.5 0.2 0.12 12.8 0.2 1.4 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain DUF4574 PF15141.6 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_1 - 0.13 12.1 0.1 0.27 11.2 0.1 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Peptidase_C48 PF02902.19 NODE_41149_length_500_cov_3.716129_g33610_i0reverse_frame_1 - 0.1 12.4 3.2 0.13 12.1 2.6 1.4 1 1 0 1 1 1 0 Ulp1 protease family, C-terminal catalytic domain ABC_tran PF00005.27 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 1.3e-14 54.9 0.0 2.1e-14 54.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 1.2e-07 31.9 0.4 1.3e-07 31.8 0.4 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.00047 18.9 0.1 0.00065 18.5 0.1 1.2 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.00057 19.4 0.1 0.00063 19.2 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.021 15.0 0.0 0.19 12.0 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit EspG PF06872.11 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.036 12.6 0.1 0.044 12.3 0.1 1.0 1 0 0 1 1 1 0 EspG protein oligo_HPY PF08352.12 NODE_41148_length_500_cov_3.866667_g33609_i0forward_frame_1 - 0.041 14.4 0.0 0.084 13.4 0.0 1.5 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region HALZ PF02183.18 NODE_41141_length_500_cov_62.451613_g33602_i0reverse_frame_1 - 0.033 14.4 0.6 0.29 11.4 0.1 2.5 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF4358 PF14270.6 NODE_41141_length_500_cov_62.451613_g33602_i0reverse_frame_1 - 0.037 14.3 0.1 0.075 13.3 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4358) ubiquitin PF00240.23 NODE_41138_length_500_cov_82.901075_g33599_i0reverse_frame_1 - 0.0011 18.7 0.0 0.0015 18.2 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_41138_length_500_cov_82.901075_g33599_i0reverse_frame_1 - 0.0053 16.6 0.0 0.0072 16.1 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like MFS18 PF17352.2 NODE_41134_length_500_cov_90.505376_g33595_i0reverse_frame_1 - 0.85 10.0 6.3 0.081 13.3 1.2 1.9 2 1 0 2 2 2 0 Male Flower Specific protein 18 Chloroa_b-bind PF00504.21 NODE_41134_length_500_cov_90.505376_g33595_i0forward_frame_1 - 2.7e-21 76.8 0.1 3.5e-20 73.1 0.0 2.0 2 0 0 2 2 2 1 Chlorophyll A-B binding protein SOG2 PF10428.9 NODE_41122_length_500_cov_144.763441_g33584_i0reverse_frame_1 - 0.9 8.7 8.2 0.98 8.5 8.2 1.0 1 0 0 1 1 1 0 RAM signalling pathway protein Apt1 PF10351.9 NODE_41122_length_500_cov_144.763441_g33584_i0reverse_frame_1 - 3.4 6.4 5.1 3.7 6.3 5.1 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain SPX PF03105.19 NODE_41122_length_500_cov_144.763441_g33584_i0reverse_frame_1 - 3.8 7.3 6.9 4.3 7.2 6.9 1.1 1 0 0 1 1 1 0 SPX domain YebO PF13974.6 NODE_41117_length_500_cov_189.976344_g33580_i0reverse_frame_1 - 3.2 7.9 0.0 3.2 7.9 0.0 2.2 2 0 0 2 2 2 0 YebO-like protein Glucosamine_iso PF01182.20 NODE_41111_length_500_cov_286.666667_g33575_i0forward_frame_1 - 0.045 13.6 0.0 0.064 13.1 0.0 1.2 1 0 0 1 1 1 0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Ammonium_transp PF00909.21 NODE_41099_length_500_cov_3753.662366_g33565_i0forward_frame_1 - 7.7e-07 28.1 0.0 9.4e-07 27.8 0.0 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF443 PF04276.12 NODE_41097_length_500_cov_10357.440860_g33564_i0reverse_frame_1 - 0.075 12.8 0.2 0.098 12.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF443) Gln-synt_C-ter PF18318.1 NODE_41097_length_500_cov_10357.440860_g33564_i0forward_frame_1 - 4.6e-34 116.8 0.3 7.4e-34 116.1 0.3 1.2 1 0 0 1 1 1 1 Glutamine synthetase C-terminal domain Dor1 PF04124.12 NODE_41097_length_500_cov_10357.440860_g33564_i0forward_frame_1 - 0.072 11.8 0.1 0.18 10.4 0.0 1.6 2 0 0 2 2 2 0 Dor1-like family PEX-2N PF09263.10 NODE_41092_length_501_cov_2.502146_g33559_i0reverse_frame_1 - 0.18 12.2 0.0 0.35 11.2 0.0 1.4 1 0 0 1 1 1 0 Peroxisome biogenesis factor 1, N-terminal VD10_N PF08476.10 NODE_41078_length_501_cov_64.875536_g33546_i0forward_frame_1 - 0.036 13.7 0.0 0.1 12.3 0.0 1.7 1 0 0 1 1 1 0 Viral D10 N-terminal AAA PF00004.29 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 1e-12 48.6 0.1 1.5e-12 48.0 0.1 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 4.4e-10 40.0 0.0 6.3e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 4.6e-09 36.9 0.0 1.2e-07 32.3 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 5.3e-05 23.2 1.6 0.00016 21.7 1.6 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_19 PF13245.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.00029 21.2 1.1 0.0013 19.1 1.1 1.8 1 1 0 1 1 1 1 AAA domain DUF2075 PF09848.9 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.00052 19.4 0.0 0.0006 19.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) RuvB_N PF05496.12 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.00078 19.2 0.0 0.12 12.1 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.0013 17.9 0.0 0.0017 17.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_7 PF12775.7 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.0017 17.9 0.5 0.0029 17.1 0.2 1.5 1 1 0 1 1 1 1 P-loop containing dynein motor region AAA_11 PF13086.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.0019 18.1 0.5 0.0031 17.3 0.2 1.5 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.0035 17.4 0.5 0.029 14.3 0.5 1.9 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit NACHT PF05729.12 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.011 15.6 0.1 0.023 14.6 0.1 1.5 1 1 0 1 1 1 0 NACHT domain KAP_NTPase PF07693.14 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.017 14.3 2.8 1.3 8.2 0.9 2.0 1 1 1 2 2 2 0 KAP family P-loop domain Zot PF05707.12 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.019 14.6 0.1 0.035 13.7 0.1 1.5 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) GvpD PF07088.11 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.02 13.5 0.0 0.021 13.5 0.0 1.2 1 0 0 1 1 1 0 GvpD gas vesicle protein AAA_32 PF13654.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.027 13.3 0.0 0.038 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.028 13.6 0.0 0.032 13.4 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Poxvirus_B22R_N PF13169.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.033 14.7 0.8 0.093 13.2 0.2 1.9 2 0 0 2 2 2 0 Poxvirus B22R protein N-terminal AAA_30 PF13604.6 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.056 13.2 0.1 0.095 12.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain DUF3638 PF12340.8 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.058 12.7 0.0 0.071 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3638) T2SSE PF00437.20 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.091 11.8 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 NODE_41017_length_502_cov_5.068522_g33490_i0reverse_frame_2 - 0.11 12.8 0.1 0.19 12.1 0.1 1.5 1 1 0 1 1 1 0 RNA helicase Babuvirus_MP PF07234.11 NODE_41015_length_502_cov_53.297645_g33488_i0reverse_frame_2 - 4 7.6 7.4 0.3 11.3 1.1 2.1 1 1 1 2 2 2 0 Movement and RNA silencing protein DUF2670 PF10875.8 NODE_41013_length_502_cov_61.235546_g33486_i0reverse_frame_2 - 1.9 8.6 13.6 1.2 9.3 3.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2670) DUF296 PF03479.15 NODE_41006_length_502_cov_85.950749_g33479_i0reverse_frame_2 - 3.6e-18 65.9 0.3 4.4e-18 65.6 0.3 1.1 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain YMF19 PF02326.15 NODE_40989_length_502_cov_549.817987_g33465_i0forward_frame_3 - 0.09 13.6 0.1 0.14 13.0 0.1 1.3 1 0 0 1 1 1 0 Plant ATP synthase F0 S_layer_N PF05123.12 NODE_40988_length_502_cov_774.678801_g33464_i0reverse_frame_3 - 0.021 14.7 0.3 0.024 14.5 0.3 1.0 1 0 0 1 1 1 0 S-layer like family, N-terminal region SMI1_KNR4 PF09346.10 NODE_40988_length_502_cov_774.678801_g33464_i0reverse_frame_3 - 0.47 10.8 3.0 2.3 8.6 3.0 2.0 1 1 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) DUF2572 PF10833.8 NODE_40979_length_503_cov_1.950855_g33457_i0forward_frame_2 - 3.5 7.3 9.5 0.37 10.5 5.4 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2572) BTB PF00651.31 NODE_40975_length_503_cov_2.446581_g33453_i0reverse_frame_2 - 0.0021 18.3 1.1 0.0035 17.6 1.1 1.4 1 0 0 1 1 1 1 BTB/POZ domain RabGAP-TBC PF00566.18 NODE_40975_length_503_cov_2.446581_g33453_i0forward_frame_2 - 4.6e-08 33.0 0.0 8.6e-08 32.1 0.0 1.5 1 1 0 1 1 1 1 Rab-GTPase-TBC domain Zap1_zf2 PF18217.1 NODE_40975_length_503_cov_2.446581_g33453_i0forward_frame_2 - 0.19 11.7 0.1 0.46 10.5 0.1 1.6 1 0 0 1 1 1 0 Zap1 zinc finger 2 PAP2 PF01569.21 NODE_40974_length_503_cov_2.480769_g33452_i0reverse_frame_3 - 7.8e-18 64.6 0.8 1.9e-17 63.3 0.0 1.8 1 1 1 2 2 2 2 PAP2 superfamily DUF5325 PF17259.2 NODE_40974_length_503_cov_2.480769_g33452_i0reverse_frame_3 - 0.049 13.5 1.0 0.11 12.4 1.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5325) SNN_linker PF09050.10 NODE_40972_length_503_cov_2.544872_g33450_i0forward_frame_2 - 3.9 7.3 6.7 4.7 7.1 0.1 3.0 3 0 0 3 3 3 0 Stannin unstructured linker GDPD PF03009.17 NODE_40965_length_503_cov_3.134615_g33444_i0forward_frame_3 - 2.9e-42 145.2 0.0 3.2e-42 145.1 0.0 1.0 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family Peptidase_S26 PF10502.9 NODE_40960_length_503_cov_3.613248_g33439_i0forward_frame_2 - 6e-08 32.6 0.0 8.4e-08 32.1 0.0 1.3 1 0 0 1 1 1 1 Signal peptidase, peptidase S26 DUF2576 PF10845.8 NODE_40959_length_503_cov_3.739316_g33438_i0reverse_frame_3 - 0.034 13.8 0.5 0.2 11.3 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) CytB6-F_Fe-S PF08802.10 NODE_40959_length_503_cov_3.739316_g33438_i0forward_frame_3 - 0.055 13.5 0.2 0.12 12.4 0.2 1.5 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit VATC PF18716.1 NODE_40958_length_503_cov_4.431624_g33437_i0reverse_frame_3 - 0.032 14.1 0.0 0.066 13.1 0.0 1.5 1 0 0 1 1 1 0 Vms1-associating treble clef domain CTV_P13 PF06922.11 NODE_40955_length_503_cov_39.081197_g33434_i0forward_frame_2 - 0.073 13.2 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Citrus tristeza virus P13 protein DUF4138 PF13595.6 NODE_40953_length_503_cov_57.019231_g33432_i0forward_frame_3 - 0.012 14.9 4.0 0.64 9.3 0.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4138) UL20 PF17582.2 NODE_40939_length_503_cov_99.493590_g33419_i0forward_frame_2 - 0.02 14.2 0.1 0.03 13.6 0.1 1.2 1 0 0 1 1 1 0 Cytomegalovirus UL20 UL20 PF17582.2 NODE_40935_length_503_cov_107.175214_g33415_i0forward_frame_2 - 0.019 14.3 0.1 0.03 13.6 0.1 1.3 1 0 0 1 1 1 0 Cytomegalovirus UL20 PHD PF00628.29 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 2.5e-07 30.5 12.4 5.8e-07 29.3 12.4 1.6 1 0 0 1 1 1 1 PHD-finger C1_2 PF03107.16 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 0.37 11.1 9.3 0.91 9.9 4.8 2.4 2 0 0 2 2 2 0 C1 domain PHD_2 PF13831.6 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 1.3 8.6 14.9 0.11 12.0 7.4 2.3 1 1 1 2 2 2 0 PHD-finger Presenilin PF01080.17 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 2.2 7.0 10.1 2.3 6.9 10.1 1.1 1 0 0 1 1 1 0 Presenilin Dsh_C PF12316.8 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 4 7.8 7.2 4.8 7.5 7.2 1.1 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal FCP1_C PF09309.10 NODE_40927_length_503_cov_162.946581_g33407_i0reverse_frame_3 - 5.7 6.7 24.1 7.2 6.4 24.1 1.1 1 0 0 1 1 1 0 FCP1, C-terminal DUF3584 PF12128.8 NODE_40923_length_503_cov_238.264957_g33403_i0reverse_frame_3 - 2.3 5.6 18.4 2.7 5.4 18.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF2207 PF09972.9 NODE_40923_length_503_cov_238.264957_g33403_i0forward_frame_2 - 3.3 6.4 4.8 3.6 6.3 4.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3280 PF11684.8 NODE_40920_length_503_cov_345.155983_g33400_i0reverse_frame_3 - 0.21 12.0 1.9 10 6.5 0.0 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2380) DnaJ PF00226.31 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_2 - 5.9e-15 55.1 0.4 1e-14 54.4 0.4 1.4 1 0 0 1 1 1 1 DnaJ domain DUF3293 PF11697.8 NODE_40905_length_504_cov_2.724947_g33388_i0reverse_frame_2 - 0.17 12.4 0.0 0.42 11.1 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3293) Nuc_recep-AF1 PF11825.8 NODE_40905_length_504_cov_2.724947_g33388_i0forward_frame_2 - 0.82 9.7 6.2 1.5 8.9 6.2 1.6 1 1 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 PTSIIB_sorb PF03830.15 NODE_40903_length_504_cov_2.833689_g33386_i0reverse_frame_3 - 0.014 15.6 5.6 0.029 14.6 5.0 1.7 1 1 0 1 1 1 0 PTS system sorbose subfamily IIB component Peptidase_S77 PF03420.13 NODE_40903_length_504_cov_2.833689_g33386_i0reverse_frame_3 - 0.078 12.6 0.0 0.15 11.7 0.0 1.4 2 0 0 2 2 2 0 Prohead core protein serine protease ETX_MTX2 PF03318.13 NODE_40898_length_504_cov_16.575693_g33381_i0reverse_frame_3 - 3.3 7.4 31.3 4.3 7.1 31.3 1.2 1 0 0 1 1 1 0 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 DUF3311 PF11755.8 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 0.041 13.8 2.6 0.041 13.8 2.6 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3311) EphA2_TM PF14575.6 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 0.058 14.3 15.9 1.2 10.1 0.9 2.4 2 1 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain ODV-E18 PF10717.9 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 3 7.8 9.8 2.5 8.0 0.9 2.4 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 UPF0182 PF03699.13 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 3.4 5.7 6.5 4.3 5.3 6.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) Tetraspanin PF00335.20 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 4.7 6.9 6.3 6.1 6.5 6.3 1.2 1 0 0 1 1 1 0 Tetraspanin family TssN PF17555.2 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_3 - 7.4 5.9 6.8 0.76 9.1 2.0 1.6 2 0 0 2 2 2 0 Type VI secretion system, TssN Apt1 PF10351.9 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_2 - 0.0035 16.3 8.3 0.0036 16.2 8.3 1.0 1 0 0 1 1 1 1 Golgi-body localisation protein domain SPX PF03105.19 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_2 - 0.14 12.0 9.5 0.16 11.8 9.5 1.1 1 0 0 1 1 1 0 SPX domain Presenilin PF01080.17 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_2 - 0.21 10.3 0.5 0.27 9.9 0.5 1.2 1 0 0 1 1 1 0 Presenilin Macoilin PF09726.9 NODE_40898_length_504_cov_16.575693_g33381_i0forward_frame_2 - 2.5 6.6 13.2 3 6.3 13.2 1.1 1 0 0 1 1 1 0 Macoilin family CCAP PF11105.8 NODE_40891_length_504_cov_79.014925_g33374_i0forward_frame_2 - 0.095 12.7 0.4 0.88 9.5 0.1 2.0 2 0 0 2 2 2 0 Arthropod cardioacceleratory peptide 2a Keratin_B2 PF01500.17 NODE_40875_length_504_cov_217.980810_g33358_i0reverse_frame_3 - 0.0033 17.4 6.2 0.0046 17.0 6.2 1.2 1 0 0 1 1 1 1 Keratin, high sulfur B2 protein FNIP PF05725.12 NODE_40873_length_504_cov_221.441365_g33356_i0reverse_frame_3 - 4.1e-10 39.7 0.1 6.3e-10 39.1 0.1 1.2 1 0 0 1 1 1 1 FNIP Repeat ShK PF01549.24 NODE_40873_length_504_cov_221.441365_g33356_i0reverse_frame_3 - 3.2 8.4 10.1 0.29 11.7 2.1 2.8 3 1 0 3 3 3 0 ShK domain-like FNIP PF05725.12 NODE_40873_length_504_cov_221.441365_g33356_i0reverse_frame_2 - 4.8e-08 33.0 0.1 1.2e-07 31.8 0.1 1.7 1 0 0 1 1 1 1 FNIP Repeat Pox_TAP PF03355.14 NODE_40867_length_504_cov_1096.400853_g33350_i0reverse_frame_2 - 0.019 14.5 2.9 0.023 14.3 2.9 1.1 1 0 0 1 1 1 0 Viral Trans-Activator Protein RNA_pol_I_A49 PF06870.12 NODE_40867_length_504_cov_1096.400853_g33350_i0forward_frame_3 - 0.046 12.6 0.2 0.069 12.0 0.2 1.2 1 0 0 1 1 1 0 A49-like RNA polymerase I associated factor zf-ANAPC11 PF12861.7 NODE_40867_length_504_cov_1096.400853_g33350_i0forward_frame_3 - 1 9.4 0.1 1 9.4 0.1 2.9 1 1 2 3 3 3 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C2H2_4 PF13894.6 NODE_40864_length_504_cov_1228.187633_g33348_i0reverse_frame_2 - 0.011 16.4 1.0 0.03 15.1 1.0 1.8 1 0 0 1 1 1 0 C2H2-type zinc finger zf-3CxxC PF13695.6 NODE_40864_length_504_cov_1228.187633_g33348_i0reverse_frame_2 - 0.031 14.8 0.0 0.04 14.4 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding domain MyTH4 PF00784.17 ORF99595 - 0.076 13.5 0.2 0.13 12.8 0.2 1.4 1 0 0 1 1 1 0 MyTH4 domain DUF2755 PF10954.8 ORF99591 - 0.089 12.7 0.0 0.53 10.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2755) zf-C3H1 PF10650.9 ORF98727 - 0.13 12.0 0.0 0.28 11.0 0.0 1.5 1 0 0 1 1 1 0 Putative zinc-finger domain OmpA PF00691.20 ORF98366 - 1.2e-15 57.6 0.0 1.9e-15 57.0 0.0 1.3 1 0 0 1 1 1 1 OmpA family SulA PF03846.14 ORF98366 - 0.024 14.6 0.4 0.07 13.1 0.0 1.8 2 0 0 2 2 2 0 Cell division inhibitor SulA Phage_tail_NK PF16532.5 ORF98366 - 0.1 12.2 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Sf6-type phage tail needle knob or tip of some Caudovirales RCC1_2 PF13540.6 ORF97484 - 1.4e-28 98.0 22.0 4.8e-09 35.8 1.5 4.1 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF97484 - 6.1e-06 26.8 23.2 0.26 11.9 0.1 6.2 5 1 1 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat DUF2290 PF10053.9 ORF96108 - 0.025 14.1 0.0 0.031 13.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2290) Acetyltransf_1 PF00583.25 ORF94659 - 1.3e-06 28.6 0.0 1.6e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 ORF94659 - 0.019 14.9 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_10 PF13673.7 ORF94659 - 0.02 14.8 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF94659 - 0.022 15.2 0.0 0.03 14.8 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF94659 - 0.067 12.9 0.0 0.084 12.6 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Peptidase_M10 PF00413.24 ORF93749 - 0.15 11.9 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 Matrixin DSPc PF00782.20 ORF92480 - 1.5e-17 63.6 0.1 2e-17 63.2 0.1 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF92480 - 0.0059 16.2 0.0 0.0073 15.9 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase COG2 PF06148.11 ORF89739 - 0.011 15.8 2.4 0.13 12.4 0.5 2.3 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 IL13 PF03487.13 ORF89739 - 0.014 15.1 1.5 4.6 7.0 0.0 3.0 2 1 1 3 3 3 0 Interleukin-13 DUF5470 PF17564.2 ORF89739 - 0.042 14.1 0.3 0.27 11.5 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5470) Hemagglutinin PF00509.18 ORF89739 - 0.14 10.5 3.2 0.17 10.3 3.2 1.1 1 0 0 1 1 1 0 Haemagglutinin DUF1664 PF07889.12 ORF89739 - 0.18 11.9 3.1 0.33 11.0 3.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Tup_N PF08581.10 ORF89739 - 0.41 11.0 7.5 0.85 10.0 2.5 2.6 2 1 0 2 2 2 0 Tup N-terminal RNase_J_C PF17770.1 ORF89739 - 0.44 11.6 2.7 0.98 10.5 0.3 2.4 1 1 2 3 3 3 0 Ribonuclease J C-terminal domain Spore_GerAC PF05504.11 ORF89739 - 7.3 6.8 11.1 27 4.9 11.1 2.0 1 1 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal STE3 PF02076.15 ORF89258 - 0.0019 17.5 5.2 0.0047 16.2 5.1 1.7 1 1 0 1 1 1 1 Pheromone A receptor DUF4752 PF15944.5 ORF87660 - 0.49 10.5 1.5 21 5.2 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4752) U3_assoc_6 PF08640.11 ORF8735 - 0.16 12.0 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 6 Cyclin_N PF00134.23 ORF8231 - 5.9e-06 26.0 0.3 8e-06 25.6 0.3 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF8231 - 7.4e-06 26.4 0.7 9.7e-06 26.0 0.7 1.2 1 0 0 1 1 1 1 Cyclin ABC_tran PF00005.27 ORF8187 - 2.2e-14 54.1 0.0 3.1e-14 53.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF8187 - 0.0076 15.7 0.0 0.0086 15.5 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SRC-1 PF08832.10 ORF77194 - 0.036 15.1 0.5 0.12 13.5 0.0 2.0 3 0 0 3 3 3 0 Steroid receptor coactivator APOBEC1 PF18769.1 ORF76575 - 0.11 12.7 0.8 0.25 11.6 0.3 1.8 2 1 1 3 3 3 0 APOBEC1 GED PF02212.18 ORF76466 - 0.037 14.2 1.7 0.14 12.3 0.2 2.4 2 1 0 2 2 2 0 Dynamin GTPase effector domain ATP-synt_8 PF00895.20 ORF76466 - 1.9 9.0 7.7 3.9 8.0 0.0 2.8 2 1 0 2 2 2 0 ATP synthase protein 8 DUF3139 PF11337.8 ORF76466 - 1.9 9.2 6.9 4.8 7.9 0.2 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3139) DUF2666 PF10869.8 ORF75707 - 0.00086 19.5 0.1 0.0017 18.6 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2666) 7TMR-HDED PF07697.11 ORF75707 - 0.063 13.4 0.1 0.086 13.0 0.1 1.2 1 0 0 1 1 1 0 7TM-HD extracellular zinc_ribbon_12 PF11331.8 ORF74924 - 1.1 9.1 4.9 3.1 7.7 4.9 1.8 1 0 0 1 1 1 0 Probable zinc-ribbon domain zf-TFIIIC PF12660.7 ORF74380 - 0.016 15.1 2.5 0.52 10.3 0.2 2.5 2 0 0 2 2 2 0 Putative zinc-finger of transcription factor IIIC complex zf-C2HC5 PF06221.13 ORF74380 - 0.046 13.7 14.3 0.96 9.5 0.4 3.6 2 1 1 3 3 3 0 Putative zinc finger motif, C2HC5-type RNA_pol_Rpb8 PF03870.15 ORF73149 - 0.044 14.0 0.4 0.063 13.5 0.4 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb8 Ku_PK_bind PF08785.11 ORF73059 - 0.021 15.0 1.4 0.046 13.9 1.4 1.5 1 0 0 1 1 1 0 Ku C terminal domain like EF-hand_1 PF00036.32 ORF71768 - 0.052 13.1 1.2 0.13 11.9 1.2 1.7 1 0 0 1 1 1 0 EF hand DUF2663 PF10864.8 ORF71768 - 0.072 13.5 0.3 0.12 12.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2663) Thg1C PF14413.6 ORF70556 - 0.61 10.3 6.5 1.5 9.0 6.5 1.8 1 1 0 1 1 1 0 Thg1 C terminal domain Pkinase PF00069.25 ORF70398 - 3.9e-15 55.9 0.1 5.3e-15 55.5 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70398 - 1.2e-08 34.6 0.0 1.6e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Cir_Bir_Yir PF06022.11 ORF70398 - 0.0031 17.0 1.7 0.011 15.2 0.2 2.0 2 0 0 2 2 2 1 Plasmodium variant antigen protein Cir/Yir/Bir PglD_N PF17836.1 ORF70398 - 0.038 14.6 0.2 0.095 13.3 0.2 1.6 1 0 0 1 1 1 0 PglD N-terminal domain Yqai PF09466.10 ORF70398 - 0.045 14.1 0.2 0.097 13.0 0.2 1.5 1 0 0 1 1 1 0 Hypothetical protein Yqai Sortilin_C PF15901.5 ORF7039 - 1.1e-06 29.2 1.1 1.7e-06 28.5 1.1 1.3 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal CBM_14 PF01607.24 ORF7039 - 0.017 15.2 1.7 0.042 14.0 1.1 1.9 1 1 1 2 2 2 0 Chitin binding Peritrophin-A domain CrgA PF06781.12 ORF7039 - 0.12 12.5 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Cell division protein CrgA Myb_DNA-binding PF00249.31 ORF69167 - 7.9e-13 48.4 1.9 1.1e-10 41.5 0.4 2.4 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF69167 - 1e-11 44.9 2.1 1.9e-11 44.1 1.6 1.8 1 1 1 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 ORF69167 - 0.00058 20.0 3.1 0.038 14.2 0.7 2.3 1 1 1 2 2 2 2 SANT/Myb-like domain of DAMP1 SLIDE PF09111.10 ORF69167 - 0.002 18.1 0.1 0.0037 17.3 0.1 1.5 1 0 0 1 1 1 1 SLIDE Myb_DNA-binding PF00249.31 ORF68751 - 7.9e-13 48.4 1.9 1.1e-10 41.5 0.4 2.4 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF68751 - 1e-11 44.9 2.1 1.9e-11 44.1 1.6 1.8 1 1 1 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 ORF68751 - 0.00058 20.0 3.1 0.038 14.2 0.7 2.3 1 1 1 2 2 2 2 SANT/Myb-like domain of DAMP1 SLIDE PF09111.10 ORF68751 - 0.002 18.1 0.1 0.0037 17.3 0.1 1.5 1 0 0 1 1 1 1 SLIDE zf-C6H2 PF15801.5 ORF68136 - 0.26 11.6 1.8 0.52 10.7 1.8 1.4 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding zf-C2H2 PF00096.26 ORF62465 - 1.1e-07 31.9 15.8 2.7e-06 27.5 3.3 3.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF62465 - 1.7e-06 28.2 1.6 1.7e-06 28.2 1.6 3.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF62465 - 1.6e-05 25.3 13.3 0.00022 21.8 2.7 3.4 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF62465 - 0.0079 16.5 2.3 0.014 15.6 1.9 1.6 1 1 0 1 1 1 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF62465 - 0.022 14.5 0.1 0.022 14.5 0.1 2.0 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-Di19 PF05605.12 ORF62465 - 0.08 13.2 1.2 0.08 13.2 1.2 1.9 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Ribosomal_L28 PF00830.19 ORF62465 - 0.08 13.1 1.4 0.21 11.8 1.4 1.7 1 0 0 1 1 1 0 Ribosomal L28 family zf-met PF12874.7 ORF62465 - 0.41 11.1 8.8 3.1 8.3 1.2 3.5 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF62465 - 3.2 8.1 9.1 0.39 11.1 2.5 2.4 1 1 0 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2HE PF16278.5 ORF62465 - 6.8 7.2 8.7 12 6.5 6.4 2.3 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger NUDIX PF00293.28 ORF61763 - 3.6e-17 62.6 0.0 4.1e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 ORF61763 - 3.2e-05 23.5 0.0 0.00032 20.2 0.0 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4916) uDENN PF03456.18 ORF61746 - 0.021 15.6 1.3 0.57 11.0 0.5 2.5 2 1 0 2 2 2 0 uDENN domain ERM PF00769.19 ORF59006 - 0.082 12.7 0.0 0.25 11.1 0.0 1.7 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Sod_Fe_C PF02777.18 ORF56095 - 5.9e-31 106.7 0.3 9e-31 106.1 0.3 1.3 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks148.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks148.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks148.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks148.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-C3H1 PF10650.9 ORF54073 - 0.13 12.0 0.0 0.28 11.0 0.0 1.5 1 0 0 1 1 1 0 Putative zinc-finger domain NusG_II PF07009.11 ORF52639 - 1.4 9.2 4.7 2.3 8.5 0.4 2.4 1 1 2 3 3 3 0 NusG domain II MORN PF02493.20 ORF51619 - 3e-14 52.0 18.6 1.9e-06 27.4 0.9 5.2 6 1 0 6 6 6 3 MORN repeat ECR1_N PF14382.6 ORF51619 - 0.16 11.8 0.1 3.5 7.5 0.0 2.3 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region MMR_HSR1_Xtn PF16897.5 ORF51485 - 0.0055 16.7 1.9 0.0093 16.0 1.9 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain zf-C3H1 PF10650.9 ORF51331 - 0.13 12.0 0.0 0.28 11.0 0.0 1.5 1 0 0 1 1 1 0 Putative zinc-finger domain Prok-TraM PF09228.10 ORF51129 - 0.036 14.4 0.1 0.054 13.9 0.1 1.3 1 0 0 1 1 1 0 Prokaryotic Transcriptional repressor TraM DUF1654 PF07867.11 ORF50318 - 0.038 13.7 0.1 0.07 12.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1654) RINGv PF12906.7 ORF48793 - 9.6e-13 48.0 7.7 2e-12 47.1 7.7 1.6 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF48793 - 0.03 14.5 6.0 0.03 14.5 6.0 1.9 2 1 0 2 2 2 0 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF48793 - 0.088 13.2 10.7 0.21 11.9 9.5 2.3 2 1 1 3 3 3 0 Ring finger domain DUF4718 PF15842.5 ORF48722 - 0.033 14.0 0.7 0.076 12.8 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4718) TPH PF13868.6 ORF47687 - 0.14 10.6 23.1 0.017 13.6 18.8 1.5 2 0 0 2 2 2 0 Trichohyalin-plectin-homology domain UPF0565 PF10561.9 ORF47687 - 0.57 9.3 11.5 0.62 9.2 11.1 1.3 1 1 0 1 1 1 0 Uncharacterised protein family UPF0565 4HBT PF03061.22 ORF44762 - 9.9e-19 67.5 0.1 1.4e-18 67.0 0.1 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 ORF44762 - 4.8e-05 23.7 0.2 6.7e-05 23.3 0.2 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily DUF4442 PF14539.6 ORF44762 - 0.0083 16.3 0.1 0.036 14.2 0.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4442) GP52 PF17468.2 ORF44762 - 0.055 13.6 0.5 0.17 12.0 0.0 2.0 2 1 0 2 2 2 0 Phage gene product 52 Xan_ur_permease PF00860.20 ORF43317 - 0.039 12.6 0.2 0.049 12.3 0.2 1.2 1 0 0 1 1 1 0 Permease family Collagen PF01391.18 ORF42159 - 0.067 12.9 6.8 0.1 12.3 6.8 1.2 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) Collagen PF01391.18 ORF42036 - 0.067 12.9 6.8 0.1 12.3 6.8 1.2 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) Thiolase_N PF00108.23 ORF4168 - 5.3e-43 147.3 1.2 5.8e-43 147.1 1.2 1.0 1 0 0 1 1 1 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.26 ORF4168 - 8.3e-05 22.3 1.3 9.8e-05 22.0 1.3 1.2 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ABC_trans_CmpB PF06541.11 ORF38133 - 0.14 12.4 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Putative ABC-transporter type IV CheW PF01584.19 ORF36376 - 7e-36 122.9 1.9 8.1e-36 122.7 1.9 1.0 1 0 0 1 1 1 1 CheW-like domain DUF3774 PF12609.8 ORF35849 - 0.059 14.4 0.1 0.099 13.7 0.1 1.5 1 0 0 1 1 1 0 Wound-induced protein U3_assoc_6 PF08640.11 ORF33742 - 0.16 12.0 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 6 Zfx_Zfy_act PF04704.13 ORF33369 - 0.17 11.0 0.0 0.2 10.8 0.0 1.0 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region RCC1_2 PF13540.6 ORF32809 - 1.2e-10 40.8 9.7 0.0061 16.3 0.4 4.2 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF32809 - 7.4e-06 26.2 0.4 10 6.2 0.0 4.0 3 1 1 4 4 4 4 Uncharacterised ACR, YagE family COG1723 PH_TFIIH PF08567.11 ORF32809 - 0.0042 17.4 0.5 1.1 9.7 0.0 2.7 2 1 1 3 3 3 2 TFIIH p62 subunit, N-terminal domain Fn3_assoc PF13287.6 ORF31604 - 0.012 15.8 0.0 0.02 15.1 0.0 1.4 1 0 0 1 1 1 0 Fn3 associated CHB_HEX_C_1 PF13290.6 ORF31604 - 0.031 14.3 0.0 0.045 13.8 0.0 1.3 1 0 0 1 1 1 0 Chitobiase/beta-hexosaminidase C-terminal domain RecA PF00154.21 ORF31560 - 0.00072 19.1 2.1 0.0009 18.8 2.1 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Spectrin PF00435.21 ORF31560 - 0.015 15.8 0.5 0.09 13.3 0.1 2.1 1 1 1 2 2 2 0 Spectrin repeat Syntaxin_2 PF14523.6 ORF31560 - 6.6 7.2 12.6 1.6 9.2 4.1 2.2 1 1 1 2 2 2 0 Syntaxin-like protein RisS_PPD PF16524.5 ORF31452 - 0.11 12.8 0.3 0.18 12.1 0.3 1.4 1 1 0 1 1 1 0 Periplasmic domain of Sensor histidine kinase RisS Phage_connect_1 PF05135.13 ORF29530 - 0.0092 16.5 0.4 0.023 15.2 0.2 1.7 1 1 0 1 1 1 1 Phage gp6-like head-tail connector protein Ribosomal_S10 PF00338.22 ORF27770 - 0.019 15.2 0.3 0.043 14.0 0.2 1.6 2 0 0 2 2 2 0 Ribosomal protein S10p/S20e GST_C_3 PF14497.6 ORF27237 - 0.00019 21.6 0.0 0.0003 20.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF27237 - 0.00019 21.4 0.0 0.00032 20.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF27237 - 0.0014 18.8 0.0 0.0026 17.9 0.0 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Rox3 PF08633.10 ORF27237 - 0.04 14.2 0.0 0.052 13.8 0.0 1.2 1 0 0 1 1 1 0 Rox3 mediator complex subunit Hemerythrin PF01814.23 ORF27237 - 0.12 13.0 1.8 0.41 11.3 0.2 2.0 2 0 0 2 2 2 0 Hemerythrin HHE cation binding domain zinc-ribbons_6 PF07191.12 ORF27237 - 0.26 11.3 4.7 0.13 12.2 2.4 1.7 2 0 0 2 2 2 0 zinc-ribbons Phospholip_A2_1 PF00068.19 ORF26712 - 0.046 14.2 1.0 0.097 13.1 0.5 1.7 2 0 0 2 2 2 0 Phospholipase A2 DUF1856 PF08983.10 ORF26616 - 0.23 11.7 2.3 0.78 10.0 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1856) RINGv PF12906.7 ORF2637 - 9.6e-13 48.0 7.7 2e-12 47.1 7.7 1.6 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF2637 - 0.03 14.5 6.0 0.03 14.5 6.0 1.9 2 1 0 2 2 2 0 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF2637 - 0.088 13.2 10.7 0.21 11.9 9.5 2.3 2 1 1 3 3 3 0 Ring finger domain Med2 PF11214.8 ORF25583 - 0.073 13.2 5.4 0.068 13.3 4.1 1.6 1 1 0 1 1 1 0 Mediator complex subunit 2 DUF2373 PF10180.9 ORF25583 - 0.14 12.0 2.7 0.27 11.1 2.7 1.4 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2373) DUF1794 PF08768.11 ORF25423 - 8.5e-16 58.2 0.0 1e-15 58.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1794) Transglut_core PF01841.19 ORF25258 - 0.074 13.5 0.0 0.1 13.0 0.0 1.3 1 0 0 1 1 1 0 Transglutaminase-like superfamily YajC PF02699.15 ORF22710 - 0.018 14.9 0.5 0.03 14.2 0.5 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit TadE PF07811.12 ORF22710 - 7.9 6.9 7.9 14 6.0 7.9 1.5 1 1 0 1 1 1 0 TadE-like protein PMBR PF09373.10 ORF22440 - 0.22 11.8 0.9 46 4.4 0.1 3.7 4 0 0 4 4 4 0 Pseudomurein-binding repeat DUF913 PF06025.12 ORF2052 - 0.11 11.4 0.2 0.12 11.4 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) LRR_6 PF13516.6 ORF19424 - 3.4e-10 39.2 1.3 0.012 15.6 0.3 4.0 4 0 0 4 4 4 3 Leucine Rich repeat LRR_4 PF12799.7 ORF19424 - 0.0076 16.6 4.8 0.015 15.7 1.6 2.7 3 0 0 3 3 3 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF19424 - 0.034 13.9 5.0 4.5 7.1 5.6 3.0 1 1 0 1 1 1 0 Leucine rich repeat DUF2956 PF11169.8 ORF18593 - 0.44 10.8 4.7 0.087 13.0 1.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2956) DUF2897 PF11446.8 ORF18593 - 1.2 9.0 4.4 18 5.3 2.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2897) ATPase_gene1 PF09527.10 ORF17806 - 0.0044 17.2 0.5 13 6.0 0.0 3.3 3 0 0 3 3 3 2 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Benyvirus_P25 PF05744.11 ORF17806 - 0.0087 15.4 1.5 0.94 8.7 0.6 2.2 1 1 1 2 2 2 2 Benyvirus P25/P26 protein MORN PF02493.20 ORF148919 - 2.9e-16 58.3 17.5 1.5e-08 34.0 3.0 5.2 5 1 0 5 5 5 3 MORN repeat MarC PF01914.17 ORF148592 - 1.5e-54 184.5 7.2 1.6e-54 184.4 7.2 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DUF3784 PF12650.7 ORF148592 - 2.2 8.6 8.7 0.38 11.0 0.5 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF3784) Golgin_A5 PF09787.9 ORF145383 - 0.0064 16.0 0.2 0.0078 15.7 0.2 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 HMMR_N PF15905.5 ORF145383 - 0.027 14.0 0.1 0.031 13.7 0.1 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF4618 PF15397.6 ORF145383 - 0.028 13.8 0.1 0.038 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Streptin-Immun PF11083.8 ORF145383 - 0.08 13.4 0.2 0.11 12.9 0.2 1.1 1 0 0 1 1 1 0 Lantibiotic streptin immunity protein Terminase_3C PF17288.2 ORF145383 - 0.089 13.2 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Terminase RNAseH like domain DUF4446 PF14584.6 ORF145383 - 0.14 12.1 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) Herpes_UL25 PF01499.16 ORF145383 - 0.19 10.2 0.0 0.21 10.0 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL25 family Spc7 PF08317.11 ORF144695 - 0.0036 16.2 2.8 0.004 16.1 2.4 1.3 1 1 0 1 1 1 1 Spc7 kinetochore protein KASH_CCD PF14662.6 ORF144695 - 0.038 13.8 4.6 0.047 13.5 0.9 2.1 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH Rootletin PF15035.6 ORF144695 - 0.054 13.5 0.8 0.094 12.7 0.8 1.3 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Imm40 PF15569.6 ORF144695 - 0.055 13.6 1.8 0.93 9.6 0.1 2.5 1 1 0 2 2 2 0 Immunity protein 40 QueF PF14489.6 ORF144695 - 0.063 13.4 0.1 0.19 11.9 0.1 1.8 2 0 0 2 2 2 0 QueF-like protein DUF5470 PF17564.2 ORF144695 - 0.09 13.0 0.8 0.36 11.1 0.1 2.2 1 1 0 2 2 2 0 Family of unknown function (DUF5470) KH_5 PF13184.6 ORF144695 - 0.1 12.7 1.0 2.5 8.2 0.1 2.3 2 0 0 2 2 2 0 NusA-like KH domain KLRAQ PF10205.9 ORF144695 - 0.15 12.3 4.1 0.12 12.6 2.0 1.9 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein IL13 PF03487.13 ORF144695 - 0.18 11.6 0.5 4.6 7.0 0.0 2.7 2 1 1 3 3 3 0 Interleukin-13 Spore_GerAC PF05504.11 ORF144695 - 0.7 10.1 9.4 0.55 10.4 7.1 1.7 1 1 1 2 2 2 0 Spore germination B3/ GerAC like, C-terminal MORN PF02493.20 ORF143715 - 1.7e-16 59.0 27.9 2.6e-06 27.0 0.4 6.2 6 0 0 6 6 6 5 MORN repeat Condensin2nSMC PF12422.8 ORF143043 - 0.0051 17.0 0.0 0.0072 16.5 0.0 1.2 1 0 0 1 1 1 1 Condensin II non structural maintenance of chromosomes subunit Allexi_40kDa PF05549.11 ORF141983 - 0.032 13.7 3.6 0.2 11.1 3.6 2.0 1 1 0 1 1 1 0 Allexivirus 40kDa protein V-SNARE PF05008.15 ORF141983 - 0.034 14.5 3.0 0.034 14.5 3.0 2.8 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus DUF3106 PF11304.8 ORF141983 - 0.063 13.8 6.4 0.14 12.6 6.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3106) Spc7 PF08317.11 ORF141983 - 0.13 11.1 17.4 0.18 10.7 17.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 ORF141983 - 0.95 9.0 5.8 1.1 8.8 5.8 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit FapA PF03961.13 ORF141983 - 2.2 6.8 9.5 2.7 6.5 9.5 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A IFT20 PF14931.6 ORF141324 - 0.016 15.3 2.0 0.022 14.9 0.2 1.9 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 CbiX PF01903.17 ORF141324 - 0.043 14.1 0.0 0.067 13.5 0.0 1.4 1 0 0 1 1 1 0 CbiX 2Fe-2S_thioredx PF01257.19 ORF141289 - 0.084 12.7 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 Thioredoxin-like [2Fe-2S] ferredoxin U3_assoc_6 PF08640.11 ORF140958 - 0.16 12.0 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 6 SAM_1 PF00536.30 ORF137356 - 4.6e-06 27.0 0.0 6.8e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 ORF137356 - 1.4e-05 25.1 0.0 2.3e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) RCC1 PF00415.18 ORF137356 - 0.0024 18.4 0.2 0.0063 17.1 0.1 1.7 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat Defensin_5 PF18251.1 ORF13323 - 0.14 12.2 0.5 0.14 12.2 0.5 3.9 4 0 0 4 4 4 0 Fungal defensin Copsin Glyco_hydro_31 PF01055.26 ORF131409 - 9.9e-05 21.7 0.0 0.00014 21.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF4430 PF14478.6 ORF130174 - 0.21 12.2 1.2 0.25 12.0 0.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4430) Aldolase PF01081.19 ORF129843 - 1.9e-24 86.2 0.3 2.3e-24 85.9 0.3 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase TMP-TENI PF02581.17 ORF129843 - 0.0047 16.3 0.1 0.013 14.8 0.0 1.8 1 1 1 2 2 2 1 Thiamine monophosphate synthase zf-CCCH PF00642.24 ORF129382 - 0.042 13.8 1.8 0.098 12.6 1.8 1.7 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Corona_S2 PF01601.16 ORF128503 - 0.24 9.8 0.4 0.3 9.5 0.4 1.1 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein Ribosomal_S5 PF00333.20 ORF128426 - 4.1e-30 103.6 2.6 7.9e-30 102.6 2.6 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 ORF128426 - 4.1e-30 103.0 0.6 7.6e-30 102.2 0.6 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain VWA_N2 PF16164.5 ORF127770 - 0.099 12.8 0.9 0.099 12.8 0.9 2.7 1 1 1 2 2 2 0 VWA N-terminal Thg1C PF14413.6 ORF127764 - 0.61 10.3 6.5 1.5 9.0 6.5 1.8 1 1 0 1 1 1 0 Thg1 C terminal domain SICA_alpha PF12887.7 ORF126715 - 0.18 11.7 10.2 0.032 14.1 5.2 1.9 2 0 0 2 2 2 0 SICA extracellular alpha domain YojJ PF10372.9 ORF126715 - 0.37 10.9 0.2 0.37 10.9 0.2 2.6 3 0 0 3 3 3 0 Bacterial membrane-spanning protein N-terminus ComFB PF10719.9 ORF126715 - 0.38 10.9 4.5 5 7.3 4.5 2.4 1 1 0 1 1 1 0 Late competence development protein ComFB ApoLp-III PF07464.11 ORF126715 - 0.51 10.4 11.3 0.78 9.8 0.4 2.2 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) SICA_beta PF12878.7 ORF126715 - 0.78 9.9 12.3 0.58 10.3 9.0 2.0 1 1 1 2 2 2 0 SICA extracellular beta domain DUF4337 PF14235.6 ORF126715 - 1.1 9.4 13.0 0.26 11.4 9.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4337) YtxH PF12732.7 ORF126715 - 1.3 9.6 12.9 1.1 9.9 8.5 2.5 2 1 0 2 2 2 0 YtxH-like protein AAA_23 PF13476.6 ORF126715 - 1.4 9.4 22.4 1.9 8.9 22.3 1.3 1 1 0 1 1 1 0 AAA domain DUF4407 PF14362.6 ORF126715 - 2.2 7.5 11.7 2.7 7.2 11.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Syntaxin-6_N PF09177.11 ORF126715 - 2.5 8.7 10.2 1e+02 3.5 10.2 2.2 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF883 PF05957.13 ORF126715 - 2.9 8.6 5.1 7.6 7.2 1.3 2.3 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) DivIC PF04977.15 ORF126715 - 5.9 6.7 14.9 0.28 11.0 1.5 2.4 2 0 0 2 2 2 0 Septum formation initiator ZapB PF06005.12 ORF126715 - 9 6.8 13.9 2.6e+02 2.1 13.9 2.4 1 1 0 1 1 1 0 Cell division protein ZapB DUF2070 PF09843.9 ORF125766 - 0.2 9.9 3.2 0.23 9.7 3.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) VWA_N2 PF16164.5 ORF123446 - 0.099 12.8 0.9 0.099 12.8 0.9 2.7 1 1 1 2 2 2 0 VWA N-terminal LTXXQ PF07813.12 ORF123282 - 8e-22 77.9 13.1 8e-22 77.9 13.1 1.4 1 1 0 1 1 1 1 LTXXQ motif family protein Metal_resist PF13801.6 ORF123282 - 9.8e-06 25.8 16.1 0.00013 22.2 8.0 2.4 1 1 1 2 2 2 2 Heavy-metal resistance DNA_ligase_A_M PF01068.21 ORF123282 - 0.08 12.6 2.9 2.2 7.9 0.5 2.0 1 1 1 2 2 2 0 ATP dependent DNA ligase domain SF-assemblin PF06705.11 ORF122609 - 0.0013 18.1 26.8 0.016 14.6 26.8 2.6 1 1 0 1 1 1 1 SF-assemblin/beta giardin RecG_N PF17190.4 ORF122609 - 0.0091 16.7 3.2 0.0091 16.7 3.2 2.6 1 1 2 3 3 3 1 RecG N-terminal helical domain RhoGEF67_u2 PF16614.5 ORF122609 - 0.23 11.5 3.1 0.36 10.9 0.2 2.4 2 1 1 3 3 3 0 Unstructured region two on RhoGEF 6 and 7 YmgB PF10798.8 ORF122609 - 0.25 11.2 5.9 0.14 12.0 2.5 2.2 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR S-AdoMet_synt_C PF02773.16 ORF122609 - 0.63 10.0 2.0 1.2 9.1 0.2 2.1 1 1 1 2 2 2 0 S-adenosylmethionine synthetase, C-terminal domain DUF1451 PF07295.11 ORF122609 - 0.76 9.8 14.4 3 7.9 2.4 2.1 1 1 1 2 2 2 0 Zinc-ribbon containing domain DUF4449 PF14613.6 ORF122609 - 0.99 9.5 10.8 0.11 12.6 4.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4449) DUF2115 PF09888.9 ORF122609 - 4.1 7.9 12.1 1.1 9.8 6.4 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2115) M11L PF11099.8 ORF122609 - 4.2 7.6 9.3 2.7 8.3 2.0 2.4 1 1 0 2 2 2 0 Apoptosis regulator M11L like PIN_8 PF18476.1 ORF122609 - 8.6 6.1 15.5 8.5 6.2 7.3 2.0 1 1 1 2 2 2 0 PIN like domain zf-C3H1 PF10650.9 ORF12026 - 0.13 12.0 0.0 0.28 11.0 0.0 1.5 1 0 0 1 1 1 0 Putative zinc-finger domain DUF4374 PF14298.6 ORF120064 - 0.038 12.8 0.1 0.048 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4374) MMR_HSR1_Xtn PF16897.5 ORF117240 - 0.0055 16.7 1.9 0.0093 16.0 1.9 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Myb_DNA-binding PF00249.31 ORF11704 - 7.9e-13 48.4 1.9 1.1e-10 41.5 0.4 2.4 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF11704 - 1e-11 44.9 2.1 1.9e-11 44.1 1.6 1.8 1 1 1 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 ORF11704 - 0.00058 20.0 3.1 0.038 14.2 0.7 2.3 1 1 1 2 2 2 2 SANT/Myb-like domain of DAMP1 SLIDE PF09111.10 ORF11704 - 0.002 18.1 0.1 0.0037 17.3 0.1 1.5 1 0 0 1 1 1 1 SLIDE OSCP PF00213.18 ORF116983 - 7.2e-19 68.6 0.4 9.9e-19 68.1 0.4 1.2 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit Septin PF00735.18 ORF116983 - 0.0087 15.4 0.2 0.011 15.1 0.2 1.2 1 0 0 1 1 1 1 Septin LRR_6 PF13516.6 ORF116810 - 0.46 10.7 4.5 5.4 7.3 0.1 3.5 3 0 0 3 3 3 0 Leucine Rich repeat DUF4524 PF15025.6 ORF115478 - 0.11 12.3 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4524) tRNA_edit PF04073.15 ORF11462 - 1.5e-25 89.7 0.0 1.9e-25 89.3 0.0 1.2 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain Vps51 PF08700.11 ORF113538 - 0.046 13.8 0.0 0.074 13.1 0.0 1.2 1 0 0 1 1 1 0 Vps51/Vps67 Acetyltransf_7 PF13508.7 ORF113155 - 5.8e-11 42.7 0.0 8.5e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF113155 - 3.2e-09 37.0 0.0 4.4e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 ORF113155 - 5.7e-08 32.9 0.0 8.3e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF113155 - 0.0002 21.3 0.0 0.00036 20.5 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF113155 - 0.00028 20.9 0.0 0.00052 20.1 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 ORF113155 - 0.021 14.8 0.1 0.071 13.1 0.0 1.9 2 1 0 2 2 2 0 FR47-like protein Acetyltransf_15 PF17013.5 ORF113155 - 0.022 14.2 0.0 0.029 13.8 0.0 1.2 1 0 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_3 PF13302.7 ORF113155 - 0.092 13.4 0.0 0.22 12.2 0.0 1.6 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain IF4E PF01652.18 ORF110281 - 5.3e-23 81.6 0.6 6.7e-23 81.2 0.6 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E UNC-50 PF05216.13 ORF107534 - 0.14 11.7 7.5 0.042 13.4 4.3 1.6 1 1 1 2 2 2 0 UNC-50 family eIF-1a PF01176.19 ORF105433 - 2.2e-17 62.6 0.1 3.7e-17 61.9 0.1 1.4 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Pertus-S4-tox PF09275.10 ORF103826 - 0.74 10.1 2.9 2.2 8.6 0.1 2.5 2 1 1 3 3 3 0 Pertussis toxin S4 subunit Patatin PF01734.22 ORF102378 - 0.015 15.5 0.1 0.023 14.9 0.1 1.3 1 0 0 1 1 1 0 Patatin-like phospholipase DUF373 PF04123.13 ORF102292 - 2.1 7.7 6.4 2.5 7.5 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) TPR_1 PF00515.28 ORF101061 - 1.9e-08 33.8 0.0 1.9e-05 24.2 0.1 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF101061 - 2.4e-08 33.5 0.1 0.00039 20.3 0.1 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF101061 - 0.00052 20.1 4.3 0.0011 19.1 4.3 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat DnaJ PF00226.31 ORF101061 - 0.00054 20.0 0.0 0.0014 18.8 0.0 1.6 1 0 0 1 1 1 1 DnaJ domain TPR_7 PF13176.6 ORF101061 - 0.005 16.8 1.9 0.072 13.2 0.9 2.9 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF101061 - 0.0077 16.5 2.5 0.058 13.7 1.7 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF101061 - 0.016 15.6 0.6 6.2 7.4 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF101061 - 0.1 12.9 0.3 6.6 7.2 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF101061 - 0.24 12.3 5.0 11 7.2 0.8 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat RRM_1 PF00076.22 ORF100862 - 0.00098 18.9 0.0 0.0075 16.1 0.0 2.2 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CobW_C PF07683.14 ORF100797 - 5.3e-08 32.7 0.1 9.9e-05 22.2 0.0 2.5 2 1 0 2 2 2 2 Cobalamin synthesis protein cobW C-terminal domain mTERF PF02536.14 ORF10064 - 8.9e-19 67.5 0.0 1e-18 67.4 0.0 1.1 1 0 0 1 1 1 1 mTERF Methyltransf_31 PF13847.6 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 5.2e-13 49.1 0.0 6.5e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 2.8e-08 34.4 0.0 1e-07 32.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 3.7e-06 26.6 0.0 7.1e-06 25.7 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.18 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 4.3e-06 26.5 0.0 5.7e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_12 PF08242.12 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 5e-06 27.2 0.0 3.8e-05 24.4 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 6.9e-05 22.3 0.0 7.8e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_11 PF08241.12 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.00044 20.8 0.0 0.0029 18.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.00072 19.0 0.0 0.0012 18.3 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.6 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.00097 19.0 0.0 0.073 12.9 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.0018 17.9 0.0 0.0031 17.2 0.0 1.4 1 1 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.0052 16.4 0.0 0.0058 16.2 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.035 13.8 0.0 0.036 13.8 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein rRNA_methylase PF06962.12 NODE_41373_length_496_cov_47.212581_g33820_i0forward_frame_1 - 0.18 11.8 0.0 0.39 10.7 0.0 1.5 1 1 0 1 1 1 0 Putative rRNA methylase DUF3328 PF11807.8 NODE_41369_length_496_cov_58.318872_g33816_i0reverse_frame_1 - 1.9 8.2 5.8 0.91 9.3 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3328) Choline_transpo PF04515.12 NODE_41364_length_496_cov_74.522777_g24947_i1reverse_frame_1 - 3.2e-09 36.4 3.1 3.7e-09 36.2 3.1 1.2 1 0 0 1 1 1 1 Plasma-membrane choline transporter TolA PF06519.11 NODE_41357_length_496_cov_98.932755_g33805_i0reverse_frame_1 - 0.044 14.0 0.0 0.08 13.1 0.0 1.4 1 0 0 1 1 1 0 TolA C-terminal Phage_holin_3_5 PF16085.5 NODE_41357_length_496_cov_98.932755_g33805_i0reverse_frame_1 - 0.25 11.5 2.7 4.9 7.3 0.1 2.2 2 0 0 2 2 2 0 Bacteriophage holin Hol, superfamily III PP2C PF00481.21 NODE_41356_length_496_cov_108.229935_g33804_i0forward_frame_1 - 4.2e-15 56.1 0.2 1.6e-14 54.1 0.2 1.8 1 1 0 1 1 1 1 Protein phosphatase 2C COX6C PF02937.15 NODE_41340_length_496_cov_405.481562_g33789_i0forward_frame_1 - 0.098 12.8 0.2 0.14 12.3 0.2 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc Granulin PF00396.18 NODE_41333_length_496_cov_1186.644252_g33783_i0forward_frame_1 - 3.4 8.1 11.0 0.13 12.7 3.8 2.1 2 0 0 2 2 2 0 Granulin Mei5_like PF17021.5 NODE_41324_length_497_cov_1.603896_g33776_i0reverse_frame_1 - 0.039 14.0 0.1 0.065 13.3 0.1 1.3 1 0 0 1 1 1 0 Putative double-strand recombination repair-like DUF4993 PF16384.5 NODE_41322_length_497_cov_1.755411_g33774_i0forward_frame_1 - 0.032 13.2 0.0 0.047 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function PetM PF08041.11 NODE_41311_length_497_cov_2.816017_g33763_i0reverse_frame_1 - 0.093 12.3 0.3 0.23 11.0 0.3 1.7 1 0 0 1 1 1 0 PetM family of cytochrome b6f complex subunit 7 OATP PF03137.20 NODE_41311_length_497_cov_2.816017_g33763_i0forward_frame_1 - 0.049 11.9 0.2 0.055 11.8 0.2 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Laminin_G_1 PF00054.23 NODE_41311_length_497_cov_2.816017_g33763_i0forward_frame_1 - 0.12 12.6 0.1 0.18 12.0 0.1 1.2 1 0 0 1 1 1 0 Laminin G domain Glycoprotein_G PF00802.19 NODE_41311_length_497_cov_2.816017_g33763_i0forward_frame_1 - 0.27 10.6 5.0 0.33 10.3 5.0 1.2 1 1 0 1 1 1 0 Pneumovirus attachment glycoprotein G Bac_small_YrzI PF09501.10 NODE_41311_length_497_cov_2.816017_g33763_i0forward_frame_1 - 0.31 11.2 1.7 0.67 10.1 1.7 1.5 1 0 0 1 1 1 0 Probable sporulation protein (Bac_small_yrzI) DUF1053 PF06327.14 NODE_41311_length_497_cov_2.816017_g33763_i0forward_frame_1 - 0.32 11.6 2.2 0.98 10.0 0.5 2.0 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) Rsbr_N PF08678.10 NODE_41307_length_497_cov_5.188312_g33759_i0reverse_frame_1 - 0.043 13.9 1.2 0.043 13.9 1.2 1.9 2 1 1 3 3 3 0 Rsbr N terminal XH PF03469.14 NODE_41307_length_497_cov_5.188312_g33759_i0reverse_frame_1 - 0.15 11.9 3.5 5 7.0 1.0 2.1 1 1 1 2 2 2 0 XH domain DUF1741 PF08427.10 NODE_41307_length_497_cov_5.188312_g33759_i0reverse_frame_1 - 0.24 11.0 6.2 0.33 10.6 5.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1741) DUF2456 PF10445.9 NODE_41307_length_497_cov_5.188312_g33759_i0forward_frame_1 - 0.29 11.2 2.5 1.8 8.7 1.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2456) UL11 PF11094.8 NODE_41286_length_497_cov_143.082251_g33738_i0reverse_frame_1 - 0.016 15.1 3.5 0.016 15.1 3.5 2.5 2 0 0 2 2 2 0 Membrane-associated tegument protein Afaf PF15339.6 NODE_41279_length_497_cov_192.006494_g33731_i0reverse_frame_1 - 2.5 7.8 13.7 7.2 6.3 13.7 1.7 1 1 0 1 1 1 0 Acrosome formation-associated factor UPF0158 PF03682.13 NODE_41273_length_497_cov_364.662338_g33353_i1reverse_frame_1 - 0.14 12.2 0.3 0.2 11.6 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) Ycf70 PF17382.2 NODE_41262_length_498_cov_3.215983_g33717_i0reverse_frame_1 - 0.062 13.7 0.9 0.14 12.6 0.9 1.6 1 0 0 1 1 1 0 Uncharacterized Ycf70-like DUF4149 PF13664.6 NODE_41262_length_498_cov_3.215983_g33717_i0forward_frame_1 - 0.041 14.2 2.6 0.14 12.5 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4149) Nore1-SARAH PF16517.5 NODE_41259_length_498_cov_3.568035_g33714_i0forward_frame_1 - 2.2 8.3 4.8 0.3 11.0 0.7 1.7 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain PTS_EIIC PF02378.18 NODE_41258_length_498_cov_4.291577_g33713_i0reverse_frame_1 - 9.2e-11 41.3 8.8 1.1e-10 41.1 8.8 1.1 1 0 0 1 1 1 1 Phosphotransferase system, EIIC Thionin PF00321.17 NODE_41256_length_498_cov_6.064795_g33711_i0forward_frame_1 - 0.071 13.6 1.7 0.071 13.6 1.7 2.8 3 1 0 3 3 3 0 Plant thionin PEP-utilizers PF00391.23 NODE_41243_length_498_cov_89.691145_g33698_i0forward_frame_1 - 0.022 14.5 0.4 0.036 13.8 0.4 1.3 1 0 0 1 1 1 0 PEP-utilising enzyme, mobile domain EF-hand_7 PF13499.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 7.2e-16 58.4 5.3 1.3e-11 44.8 0.3 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 1.4e-11 43.3 2.1 0.00011 21.8 0.0 3.5 3 1 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 3.7e-11 41.7 4.1 7.2e-05 22.1 0.3 2.9 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 1.4e-06 27.5 4.2 0.0022 17.4 0.2 2.8 2 0 0 2 2 2 2 EF hand EF-hand_10 PF14788.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 1.2e-05 25.1 1.3 0.042 13.7 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 0.00052 19.8 3.7 0.056 13.3 0.2 2.3 1 1 1 2 2 2 2 EF-hand domain pair ATP-cone PF03477.16 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 0.041 14.5 0.2 0.095 13.3 0.2 1.6 1 1 0 1 1 1 0 ATP cone domain SGS PF05002.15 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 0.053 13.6 0.2 0.37 10.9 0.7 2.1 2 0 0 2 2 2 0 SGS domain DUF2267 PF10025.9 NODE_41216_length_498_cov_26384.807775_g20859_i2reverse_frame_1 - 0.13 12.5 0.0 0.32 11.3 0.0 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) HTH_Tnp_Tc5 PF03221.16 NODE_41212_length_499_cov_2.142241_g33671_i0forward_frame_3 - 0.0072 16.3 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 Tc5 transposase DNA-binding domain BRD4_CDT PF17105.5 NODE_41207_length_499_cov_3.301724_g33666_i0reverse_frame_3 - 0.04 13.5 0.2 0.072 12.7 0.2 1.4 1 0 0 1 1 1 0 C-terminal domain of bromodomain protein 4 ABC_tran PF00005.27 NODE_41205_length_499_cov_4.165948_g33664_i0forward_frame_2 - 1.4e-11 45.0 0.0 2.3e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_41205_length_499_cov_4.165948_g33664_i0forward_frame_2 - 0.008 16.0 0.0 0.0091 15.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ArsP_1 PF03773.13 NODE_41200_length_499_cov_36.049569_g33659_i0forward_frame_3 - 0.0015 17.7 0.0 0.0015 17.7 0.0 1.1 1 0 0 1 1 1 1 Predicted permease RRN3 PF05327.11 NODE_41200_length_499_cov_36.049569_g33659_i0forward_frame_3 - 0.7 8.4 2.5 0.83 8.1 2.5 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 MT PF12777.7 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 2.7e-14 53.0 4.8 3.2e-14 52.7 4.8 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor COG6 PF06419.11 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 0.0094 14.2 2.7 0.015 13.5 2.7 1.3 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 Translin PF01997.16 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 0.012 15.6 0.1 0.019 14.9 0.1 1.3 1 0 0 1 1 1 0 Translin family Sec8_exocyst PF04048.14 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 0.021 14.7 0.7 0.045 13.6 0.7 1.5 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain TPR_MLP1_2 PF07926.12 NODE_41199_length_499_cov_37.528017_g33658_i0forward_frame_3 - 0.027 14.6 4.8 0.047 13.8 4.8 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Lamprin PF06403.11 NODE_41191_length_499_cov_102.224138_g33650_i0forward_frame_3 - 0.00012 22.1 4.1 0.00015 21.7 4.1 1.2 1 0 0 1 1 1 1 Lamprin zf-RanBP PF00641.18 NODE_41190_length_499_cov_103.040948_g33649_i0reverse_frame_2 - 0.025 13.9 1.5 0.044 13.1 1.5 1.3 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DZR PF12773.7 NODE_41190_length_499_cov_103.040948_g33649_i0reverse_frame_2 - 0.046 13.7 0.9 0.093 12.8 0.9 1.5 1 0 0 1 1 1 0 Double zinc ribbon DUF35_N PF12172.8 NODE_41190_length_499_cov_103.040948_g33649_i0reverse_frame_2 - 0.066 13.1 1.0 0.14 12.1 1.0 1.5 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) HTH_20 PF12840.7 NODE_41190_length_499_cov_103.040948_g33649_i0reverse_frame_2 - 0.14 12.2 1.4 0.24 11.5 0.0 2.1 2 1 1 3 3 3 0 Helix-turn-helix domain Adeno_E4 PF05385.11 NODE_41190_length_499_cov_103.040948_g33649_i0forward_frame_2 - 0.15 12.2 2.1 0.16 12.1 0.9 1.6 1 1 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein DUF4691 PF15762.5 NODE_41185_length_499_cov_124.290948_g33644_i0reverse_frame_2 - 0.11 12.6 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4691) CopK PF11525.8 NODE_41184_length_499_cov_132.937500_g33643_i0forward_frame_2 - 0.02 14.5 0.0 0.035 13.7 0.0 1.3 1 0 0 1 1 1 0 Copper resistance protein K UPF0014 PF03649.13 NODE_41181_length_499_cov_179.127155_g33640_i0forward_frame_2 - 0.15 11.4 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0014) RCC1_2 PF13540.6 NODE_41174_length_499_cov_245.773707_g33634_i0forward_frame_3 - 2.1e-07 30.5 2.8 0.22 11.4 0.1 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Yuri_gagarin PF15934.5 NODE_41174_length_499_cov_245.773707_g33634_i0forward_frame_3 - 0.019 14.8 0.0 0.14 12.0 0.0 1.9 2 0 0 2 2 2 0 Yuri gagarin Proton_antipo_C PF01010.19 NODE_41168_length_499_cov_620.713362_g33628_i0reverse_frame_2 - 0.091 12.4 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus PCP PF02429.15 NODE_41163_length_499_cov_1486.693966_g33623_i0reverse_frame_2 - 1e-39 136.2 1.6 1.4e-39 135.7 1.6 1.2 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein Neur_chan_LBD PF02931.23 NODE_41159_length_500_cov_1.993548_g33620_i0forward_frame_2 - 1.6e-26 93.1 0.5 1.9e-26 92.9 0.5 1.0 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel ligand binding domain Pkinase PF00069.25 NODE_41157_length_500_cov_2.236559_g33618_i0reverse_frame_3 - 4.7e-26 91.7 0.0 6e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_41157_length_500_cov_2.236559_g33618_i0reverse_frame_3 - 9e-17 61.2 0.0 1.2e-16 60.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_41157_length_500_cov_2.236559_g33618_i0reverse_frame_3 - 0.00012 21.5 0.0 0.00026 20.4 0.0 1.6 1 1 1 2 2 2 1 Kinase-like Pkinase PF00069.25 NODE_41157_length_500_cov_2.236559_g33618_i0reverse_frame_2 - 0.00011 21.7 0.0 0.00019 20.9 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain DUF5450 PF17529.2 NODE_41153_length_500_cov_2.851613_g33614_i0forward_frame_3 - 3.4 7.8 9.6 7.4 6.7 9.6 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5450) Lig_chan PF00060.26 NODE_41144_length_500_cov_9.298925_g33605_i0reverse_frame_2 - 0.038 13.8 3.0 0.061 13.2 3.0 1.6 1 1 0 1 1 1 0 Ligand-gated ion channel AAA_lid_8 PF17868.1 NODE_41144_length_500_cov_9.298925_g33605_i0forward_frame_3 - 0.039 13.8 0.6 0.089 12.7 0.6 1.5 1 0 0 1 1 1 0 AAA lid domain PH_12 PF16457.5 NODE_41141_length_500_cov_62.451613_g33602_i0reverse_frame_3 - 0.1 13.1 0.0 0.13 12.8 0.0 1.3 1 0 0 1 1 1 0 Pleckstrin homology domain Ank_2 PF12796.7 NODE_41133_length_500_cov_91.113978_g33594_i0reverse_frame_3 - 0.00063 20.3 0.0 0.0013 19.3 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_41133_length_500_cov_91.113978_g33594_i0reverse_frame_3 - 0.00089 19.5 0.1 0.0027 18.0 0.1 1.9 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_41133_length_500_cov_91.113978_g33594_i0reverse_frame_3 - 0.0009 19.5 0.1 0.0038 17.6 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 NODE_41133_length_500_cov_91.113978_g33594_i0reverse_frame_3 - 0.0026 18.1 1.5 0.035 14.6 0.0 3.0 3 0 0 3 3 3 1 Ankyrin repeat Ank_4 PF13637.6 NODE_41133_length_500_cov_91.113978_g33594_i0reverse_frame_3 - 0.0078 16.8 0.0 0.19 12.3 0.0 2.3 1 1 1 2 2 2 1 Ankyrin repeats (many copies) DUF1177 PF06675.11 NODE_41126_length_500_cov_113.079570_g33587_i0forward_frame_3 - 0.26 10.1 0.2 0.36 9.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1177) FUSC_2 PF13515.6 NODE_41117_length_500_cov_189.976344_g33580_i0reverse_frame_2 - 2 8.6 8.4 6.4 6.9 8.4 1.8 1 1 0 1 1 1 0 Fusaric acid resistance protein-like RIFIN PF02009.16 NODE_41117_length_500_cov_189.976344_g33580_i0forward_frame_3 - 0.023 14.6 0.1 0.023 14.6 0.1 1.5 2 0 0 2 2 2 0 Rifin FAM176 PF14851.6 NODE_41117_length_500_cov_189.976344_g33580_i0forward_frame_3 - 0.11 12.2 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 FAM176 family Cortexin PF11057.8 NODE_41117_length_500_cov_189.976344_g33580_i0forward_frame_3 - 0.13 12.2 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Cortexin of kidney DUF4059 PF13268.6 NODE_41117_length_500_cov_189.976344_g33580_i0forward_frame_3 - 0.24 11.8 0.6 0.24 11.8 0.6 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4059) Rep_trans PF02486.19 NODE_41092_length_501_cov_2.502146_g33559_i0forward_frame_2 - 0.23 11.2 0.0 0.27 10.9 0.0 1.1 1 0 0 1 1 1 0 Replication initiation factor Herpes_BLLF1 PF05109.13 NODE_41080_length_501_cov_11.626609_g32616_i1forward_frame_3 - 0.37 8.7 11.5 0.46 8.4 11.5 1.0 1 0 0 1 1 1 0 Herpes virus major outer envelope glycoprotein (BLLF1) EcoRII-C PF09019.11 NODE_41078_length_501_cov_64.875536_g33546_i0forward_frame_2 - 0.0034 17.5 1.3 0.005 16.9 0.7 1.6 1 1 1 2 2 2 1 EcoRII C terminal DUF3918 PF13056.6 NODE_41078_length_501_cov_64.875536_g33546_i0forward_frame_2 - 0.0095 15.5 0.2 0.023 14.3 0.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3918) Peptidase_M32 PF02074.15 NODE_41078_length_501_cov_64.875536_g33546_i0forward_frame_2 - 0.018 13.9 2.3 0.022 13.6 2.3 1.3 1 0 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase YqzE PF14038.6 NODE_41076_length_501_cov_69.686695_g33544_i0reverse_frame_3 - 0.081 12.9 1.5 0.17 11.9 1.5 1.5 1 0 0 1 1 1 0 YqzE-like protein DUF4976 PF16347.5 NODE_41076_length_501_cov_69.686695_g33544_i0reverse_frame_2 - 0.0045 17.2 4.5 0.0045 17.2 4.5 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4976) EF1_GNE PF00736.19 NODE_41076_length_501_cov_69.686695_g33544_i0reverse_frame_2 - 0.22 11.7 2.5 0.7 10.1 0.3 2.1 1 1 0 2 2 2 0 EF-1 guanine nucleotide exchange domain ARHGEF5_35 PF15441.6 NODE_41076_length_501_cov_69.686695_g33544_i0reverse_frame_2 - 0.37 9.7 4.8 0.44 9.5 4.8 1.0 1 0 0 1 1 1 0 Rho guanine nucleotide exchange factor 5/35 RexB PF15968.5 NODE_41071_length_501_cov_81.952790_g33539_i0forward_frame_2 - 0.051 14.0 0.9 0.076 13.5 0.9 1.2 1 0 0 1 1 1 0 Membrane-anchored ion channel, Abi component DUF5323 PF17257.2 ORF95716 - 0.16 11.9 0.2 0.16 11.9 0.2 2.2 3 0 0 3 3 3 0 Family of unknown function (DUF5323) P21-Arc PF04062.14 ORF95454 - 4.1e-37 127.9 0.2 6e-37 127.3 0.2 1.2 1 0 0 1 1 1 1 ARP2/3 complex ARPC3 (21 kDa) subunit B5 PF03484.15 ORF95454 - 0.13 12.6 0.2 0.38 11.1 0.2 1.7 1 0 0 1 1 1 0 tRNA synthetase B5 domain DUF2298 PF10060.9 ORF95026 - 0.0014 17.4 3.4 0.0016 17.3 3.4 1.1 1 0 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) HlyIII PF03006.20 ORF95026 - 0.044 13.5 3.3 0.12 12.0 3.3 1.6 1 1 0 1 1 1 0 Haemolysin-III related DUF2085 PF09858.9 ORF95026 - 0.14 12.7 2.1 0.26 11.8 1.5 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2085) UPF0016 PF01169.19 ORF95026 - 2.2 8.7 10.6 0.32 11.4 4.1 2.5 1 1 2 3 3 3 0 Uncharacterized protein family UPF0016 DUF998 PF06197.13 ORF95026 - 2.7 7.6 14.2 6.5 6.3 14.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF998) PPR PF01535.20 ORF94961 - 2.8e-12 46.0 0.3 0.0021 18.2 0.0 3.4 3 0 0 3 3 3 3 PPR repeat PPR_2 PF13041.6 ORF94961 - 4.5e-09 36.4 0.1 0.0013 18.9 0.0 3.8 2 2 2 4 4 4 4 PPR repeat family PPR_3 PF13812.6 ORF94961 - 6.3e-09 35.8 0.0 7.9e-05 22.7 0.0 2.2 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF94961 - 6.2e-06 25.7 0.0 9.2e-06 25.2 0.0 1.3 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF94961 - 0.049 13.3 3.8 3.9 7.3 0.0 3.4 3 1 0 3 3 3 0 PPR repeat Keratin_matx PF04579.12 ORF89191 - 0.47 10.8 7.4 0.1 13.0 3.5 1.9 2 0 0 2 2 2 0 Keratin, high-sulphur matrix protein TRIF-NTD PF17798.1 ORF8806 - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 TRIF N-terminal domain DNA_RNApol_7kD PF03604.13 ORF86275 - 0.0052 16.4 0.9 0.029 14.0 0.5 2.2 2 0 0 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit Barwin PF00967.17 ORF86275 - 0.046 13.6 0.9 0.08 12.8 0.9 1.3 1 0 0 1 1 1 0 Barwin family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks149.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks149.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks149.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks149.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase PF00069.25 ORF117035 - 7.4e-37 127.1 1.3 1.6e-36 126.1 0.1 2.0 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF117035 - 1.5e-26 93.3 0.0 2.5e-26 92.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF547 PF04784.14 ORF117035 - 1.2e-12 47.9 1.2 1.6e-12 47.5 0.2 1.8 2 0 0 2 2 2 1 Protein of unknown function, DUF547 Kinase-like PF14531.6 ORF117035 - 3e-08 33.3 0.0 5.6e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Kinase-like DEP PF00610.21 ORF117035 - 6.4e-08 32.5 0.2 1.6e-07 31.3 0.2 1.7 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) CBP PF12192.8 ORF112730 - 0.095 12.9 4.7 1.7 8.9 0.3 3.0 2 0 0 2 2 2 0 Fungal calcium binding protein CBP PF12192.8 ORF110943 - 0.095 12.9 4.7 1.7 8.9 0.3 3.0 2 0 0 2 2 2 0 Fungal calcium binding protein CBP PF12192.8 ORF100860 - 0.095 12.9 4.7 1.7 8.9 0.3 3.0 2 0 0 2 2 2 0 Fungal calcium binding protein Peptidase_C2 PF00648.21 ORF90474 - 7.4e-73 245.2 0.1 1e-72 244.7 0.1 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Med17 PF10156.9 ORF90474 - 0.1 11.3 5.0 0.14 10.8 5.0 1.2 1 0 0 1 1 1 0 Subunit 17 of Mediator complex LPD39 PF18858.1 ORF90474 - 0.14 12.3 6.3 0.25 11.4 6.3 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 39 DUF600 PF04634.12 ORF90474 - 0.2 11.7 3.6 0.07 13.2 0.6 1.8 2 0 0 2 2 2 0 Protein of unknown function, DUF600 SNARE_assoc PF09335.11 ORF87766 - 3.6e-05 24.3 0.4 3.6e-05 24.3 0.4 4.3 5 0 0 5 5 5 2 SNARE associated Golgi protein FUN14 PF04930.15 ORF87766 - 1.6 9.2 9.7 12 6.3 1.6 4.2 3 2 0 3 3 3 0 FUN14 family DUF2894 PF11445.8 ORF84875 - 0.19 12.2 0.7 1 9.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2894) SDA1 PF05285.12 ORF84875 - 2.3 7.6 12.8 3.7 6.9 12.8 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF84875 - 4.4 5.4 15.8 16 3.5 13.7 2.3 2 0 0 2 2 2 0 Nop14-like family DUF2894 PF11445.8 ORF77824 - 0.19 12.2 0.7 1 9.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2894) SDA1 PF05285.12 ORF77824 - 2.3 7.6 12.8 3.7 6.9 12.8 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF77824 - 4.4 5.4 15.8 16 3.5 13.7 2.3 2 0 0 2 2 2 0 Nop14-like family Pkinase PF00069.25 ORF70461 - 2.8e-75 253.1 1.0 5.7e-75 252.1 1.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70461 - 2.6e-37 128.5 0.6 4.1e-37 127.9 0.2 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF70461 - 1.8e-08 34.7 2.5 0.00094 19.6 0.2 3.0 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF70461 - 5e-06 26.0 3.5 0.08 12.9 0.0 3.6 3 1 0 3 3 3 2 EF-hand domain Pkinase_fungal PF17667.1 ORF70461 - 4.3e-05 22.5 0.2 7.5e-05 21.7 0.2 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF70461 - 0.00041 19.8 0.1 0.0018 17.7 0.0 2.0 1 1 1 2 2 2 1 Kinase-like RIO1 PF01163.22 ORF70461 - 0.00051 19.7 0.9 0.0015 18.1 0.8 1.8 1 1 0 1 1 1 1 RIO1 family Kdo PF06293.14 ORF70461 - 0.0015 18.0 0.1 0.003 16.9 0.1 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF70461 - 0.0025 17.8 0.0 0.015 15.2 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family EF-hand_1 PF00036.32 ORF70461 - 0.0045 16.4 0.9 0.53 10.0 0.1 3.2 2 0 0 2 2 2 1 EF hand Choline_kinase PF01633.20 ORF70461 - 0.0061 16.2 1.7 0.051 13.2 0.3 2.5 2 0 0 2 2 2 1 Choline/ethanolamine kinase EF-hand_5 PF13202.6 ORF70461 - 0.0075 15.7 1.0 0.22 11.1 0.0 3.2 3 0 0 3 3 3 1 EF hand EF-hand_9 PF14658.6 ORF70461 - 0.012 15.9 0.2 0.28 11.5 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain EF-hand_8 PF13833.6 ORF70461 - 0.097 12.5 3.3 7.4 6.5 0.4 3.5 2 1 1 3 3 3 0 EF-hand domain pair EAP30 PF04157.16 ORF70461 - 0.11 11.7 0.0 0.32 10.2 0.0 1.7 2 0 0 2 2 2 0 EAP30/Vps36 family SMC_N PF02463.19 ORF64416 - 2.2e-23 82.8 16.6 5.5e-23 81.6 16.6 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF64416 - 0.00025 21.0 2.3 0.00025 21.0 2.3 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system CENP-F_leu_zip PF10473.9 ORF64416 - 0.0019 18.2 27.6 0.0019 18.2 27.6 4.7 2 1 3 5 5 5 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SMC_hinge PF06470.13 ORF64416 - 0.0084 16.4 0.2 0.065 13.5 0.0 2.4 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain XhlA PF10779.9 ORF64416 - 0.026 14.7 3.8 0.026 14.7 3.8 6.1 5 1 1 6 6 6 0 Haemolysin XhlA HsbA PF12296.8 ORF64416 - 0.43 11.0 8.3 5.3 7.5 2.0 3.7 2 2 1 3 3 3 0 Hydrophobic surface binding protein A DUF5104 PF17117.5 ORF64416 - 2.9 8.4 11.3 0.98 9.9 0.9 4.1 4 1 1 5 5 5 0 Domain of unknown function (DUF5104) T2SSG PF08334.11 ORF64416 - 4.9 7.3 9.0 0.85 9.7 0.4 3.4 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein G tRNA-synt_2b PF00587.25 ORF55751 - 5.5e-49 166.6 0.0 7.9e-49 166.0 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA_edit PF04073.15 ORF55751 - 8.4e-27 93.7 0.1 1.7e-26 92.7 0.1 1.5 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain HGTP_anticodon PF03129.20 ORF55751 - 2e-21 75.9 0.1 4.3e-21 74.9 0.1 1.6 1 0 0 1 1 1 1 Anticodon binding domain TIR_2 PF13676.6 ORF55751 - 0.12 12.9 0.0 0.36 11.4 0.0 1.8 1 0 0 1 1 1 0 TIR domain Glycos_transf_2 PF00535.26 ORF5347 - 4.7e-18 65.6 0.0 7.6e-18 64.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF5347 - 2.1e-07 31.0 0.0 2.9e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 ORF5347 - 1.2e-05 25.0 0.0 1.6e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_7C PF02709.14 ORF5347 - 2.5e-05 23.8 0.7 5.3e-05 22.8 0.7 1.5 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Ricin_B_lectin PF00652.22 ORF5347 - 7.8e-05 22.9 2.3 7.8e-05 22.9 2.3 2.5 3 1 0 3 3 3 1 Ricin-type beta-trefoil lectin domain Ribosomal_L18 PF17135.4 ORF5347 - 0.098 12.0 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e DUF2894 PF11445.8 ORF51408 - 0.19 12.2 0.7 1 9.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2894) SDA1 PF05285.12 ORF51408 - 2.3 7.6 12.8 3.7 6.9 12.8 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF51408 - 4.4 5.4 15.8 16 3.5 13.7 2.3 2 0 0 2 2 2 0 Nop14-like family PUF PF00806.19 ORF35895 - 2.7e-25 86.6 0.4 0.0011 18.6 0.0 7.2 7 0 0 7 7 7 6 Pumilio-family RNA binding repeat Herpes_UL6 PF01763.16 ORF33918 - 0.083 11.4 1.2 0.13 10.8 0.7 1.4 1 1 0 1 1 1 0 Herpesvirus UL6 like DUF4635 PF15466.6 ORF33918 - 0.095 12.2 0.9 0.64 9.5 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4635) Sec3_C_2 PF15278.6 ORF33918 - 0.11 12.9 0.1 0.54 10.6 0.1 2.2 1 0 0 1 1 1 0 Sec3 exocyst complex subunit DUF5025 PF16428.5 ORF33918 - 0.12 12.5 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5025) KAP_NTPase PF07693.14 ORF33918 - 0.26 10.5 1.6 0.48 9.6 1.6 1.3 1 0 0 1 1 1 0 KAP family P-loop domain ZnuA PF01297.17 ORF33918 - 0.45 9.9 2.2 0.33 10.3 0.6 1.6 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic XLF PF09302.11 ORF33918 - 2.1 8.5 5.2 0.79 9.9 0.3 2.5 2 1 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Baculo_PEP_C PF04513.12 ORF33918 - 3.9 7.5 8.8 20 5.2 0.2 3.3 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Apolipoprotein PF01442.18 ORF33918 - 6.9 6.5 20.3 4.2 7.2 10.7 2.7 2 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain Auxin_canalis PF05703.11 ORF152101 - 3.3 7.6 6.0 5.6 6.8 6.0 1.3 1 0 0 1 1 1 0 Auxin canalisation SMC_N PF02463.19 ORF151723 - 2.2e-23 82.8 16.6 5.5e-23 81.6 16.6 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF151723 - 0.00025 21.0 2.3 0.00025 21.0 2.3 2.2 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system CENP-F_leu_zip PF10473.9 ORF151723 - 0.0019 18.2 27.6 0.0019 18.2 27.6 4.7 2 1 3 5 5 5 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SMC_hinge PF06470.13 ORF151723 - 0.0084 16.4 0.2 0.065 13.5 0.0 2.4 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain XhlA PF10779.9 ORF151723 - 0.026 14.7 3.8 0.026 14.7 3.8 6.1 5 1 1 6 6 6 0 Haemolysin XhlA HsbA PF12296.8 ORF151723 - 0.43 11.0 8.3 5.3 7.5 2.0 3.7 2 2 1 3 3 3 0 Hydrophobic surface binding protein A DUF5104 PF17117.5 ORF151723 - 2.9 8.4 11.3 0.98 9.9 0.9 4.1 4 1 1 5 5 5 0 Domain of unknown function (DUF5104) T2SSG PF08334.11 ORF151723 - 4.9 7.3 9.0 0.85 9.7 0.4 3.4 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein G Peptidase_C2 PF00648.21 ORF144566 - 7.4e-73 245.2 0.1 1e-72 244.7 0.1 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Med17 PF10156.9 ORF144566 - 0.1 11.3 5.0 0.14 10.8 5.0 1.2 1 0 0 1 1 1 0 Subunit 17 of Mediator complex LPD39 PF18858.1 ORF144566 - 0.14 12.3 6.3 0.25 11.4 6.3 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 39 DUF600 PF04634.12 ORF144566 - 0.2 11.7 3.6 0.07 13.2 0.6 1.8 2 0 0 2 2 2 0 Protein of unknown function, DUF600 EF-hand_1 PF00036.32 ORF139219 - 4.2e-20 69.7 14.9 8.3e-05 21.9 0.2 8.7 9 0 0 9 9 9 4 EF hand EF-hand_6 PF13405.6 ORF139219 - 1.3e-17 62.1 15.4 0.0049 16.7 0.1 8.3 9 0 0 9 9 9 5 EF-hand domain EF-hand_7 PF13499.6 ORF139219 - 3.7e-16 59.3 13.5 0.00091 19.6 0.0 6.6 3 3 2 6 6 6 5 EF-hand domain pair EF-hand_5 PF13202.6 ORF139219 - 2e-10 39.7 6.5 0.048 13.2 0.0 5.6 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF139219 - 2.6e-08 33.6 3.5 0.37 10.7 0.1 5.6 4 1 1 5 5 5 3 EF-hand domain pair Caleosin PF05042.13 ORF139219 - 6.2e-05 23.0 0.2 0.057 13.3 0.0 4.0 3 1 0 4 4 4 1 Caleosin related protein S_100 PF01023.19 ORF139219 - 0.019 14.7 1.0 15 5.4 0.0 3.7 3 0 0 3 3 3 0 S-100/ICaBP type calcium binding domain DUF1488 PF07369.11 ORF139219 - 0.057 13.4 1.9 0.55 10.3 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1488) Radical_SAM PF04055.21 ORF139219 - 0.098 13.0 0.3 0.37 11.2 0.0 2.2 3 1 0 3 3 3 0 Radical SAM superfamily Med18 PF09637.10 ORF139219 - 0.12 12.2 0.1 1.2 8.9 0.1 2.3 1 1 0 1 1 1 0 Med18 protein EF-hand_4 PF12763.7 ORF139219 - 0.24 11.4 3.8 52 3.9 0.0 4.7 5 0 0 5 5 5 0 Cytoskeletal-regulatory complex EF hand DUF2894 PF11445.8 ORF134104 - 0.19 12.2 0.7 1 9.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2894) SDA1 PF05285.12 ORF134104 - 2.3 7.6 12.8 3.7 6.9 12.8 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF134104 - 4.4 5.4 15.8 16 3.5 13.7 2.3 2 0 0 2 2 2 0 Nop14-like family Alpha_kinase PF02816.18 ORF12797 - 3e-37 128.5 0.9 4.7e-37 127.9 0.9 1.3 1 0 0 1 1 1 1 Alpha-kinase family MctB PF11382.8 ORF12797 - 0.095 12.4 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB Pkinase PF00069.25 ORF125458 - 1.1e-63 215.1 0.0 1.8e-63 214.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF125458 - 8.4e-27 94.1 0.0 1.4e-26 93.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF125458 - 1.4e-15 57.4 0.0 9.4e-07 29.2 0.0 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF125458 - 8e-14 50.3 1.3 0.00026 20.7 0.0 4.5 4 0 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF125458 - 2.7e-11 42.2 0.2 0.00072 18.9 0.0 4.4 4 0 0 4 4 4 2 EF hand EF-hand_5 PF13202.6 ORF125458 - 1.3e-09 37.1 1.2 0.00029 20.2 0.0 3.5 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF125458 - 4.2e-08 32.9 2.0 0.00027 20.7 0.0 4.0 2 1 2 4 4 4 3 EF-hand domain pair Kdo PF06293.14 ORF125458 - 0.00026 20.4 0.2 0.00049 19.5 0.2 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF125458 - 0.0032 17.4 0.4 0.015 15.2 0.0 2.4 2 1 0 2 2 2 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF125458 - 0.024 13.9 0.1 0.054 12.8 0.1 1.5 1 1 0 1 1 1 0 Kinase-like YrbL-PhoP_reg PF10707.9 ORF125458 - 0.12 11.8 0.0 0.22 11.0 0.0 1.4 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL U3_assoc_6 PF08640.11 ORF122896 - 5e-17 61.8 13.1 2.5e-15 56.3 6.1 3.0 2 0 0 2 2 2 2 U3 small nucleolar RNA-associated protein 6 Peptidase_C2 PF00648.21 ORF116974 - 7.4e-73 245.2 0.1 1e-72 244.7 0.1 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Med17 PF10156.9 ORF116974 - 0.1 11.3 5.0 0.14 10.8 5.0 1.2 1 0 0 1 1 1 0 Subunit 17 of Mediator complex LPD39 PF18858.1 ORF116974 - 0.14 12.3 6.3 0.25 11.4 6.3 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 39 DUF600 PF04634.12 ORF116974 - 0.2 11.7 3.6 0.07 13.2 0.6 1.8 2 0 0 2 2 2 0 Protein of unknown function, DUF600 Chordopox_A30L PF06015.12 ORF104632 - 0.12 12.2 0.1 0.24 11.2 0.1 1.5 1 0 0 1 1 1 0 Chordopoxvirus A30L protein MT PF12777.7 ORF96328 - 1.8e-10 40.4 8.0 2.6e-10 39.9 8.0 1.2 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor T3SSipB PF16535.5 ORF96328 - 0.0047 17.4 0.9 0.0047 17.4 0.9 2.4 3 0 0 3 3 3 1 Type III cell invasion protein SipB EDR1 PF14381.6 ORF96328 - 0.064 13.0 1.1 0.13 12.0 1.1 1.4 1 0 0 1 1 1 0 Ethylene-responsive protein kinase Le-CTR1 Baculo_PEP_C PF04513.12 ORF96328 - 0.086 12.9 0.9 0.3 11.1 0.9 1.9 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1700 PF08006.11 ORF96328 - 0.11 12.0 0.2 0.24 10.9 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF1465 PF07323.12 ORF96328 - 0.23 11.3 4.1 0.18 11.6 1.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1465) zf-CpG_bind_C PF12269.8 ORF96328 - 1.8 8.3 6.2 0.93 9.2 3.0 2.1 1 1 1 2 2 2 0 CpG binding protein zinc finger C terminal domain GA-like PF17573.2 ORF96328 - 2.4 8.1 5.7 25 4.9 0.0 3.2 3 0 0 3 3 3 0 GA-like domain HSBP1 PF06825.12 ORF96328 - 8 6.4 9.3 17 5.4 4.2 2.9 2 1 1 3 3 3 0 Heat shock factor binding protein 1 Pkinase PF00069.25 ORF86285 - 2.7e-54 184.3 2.1 1.3e-53 182.1 0.1 2.6 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86285 - 9.9e-25 87.3 0.0 2.4e-24 86.0 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF86285 - 0.00024 21.1 0.0 0.00042 20.3 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family FAM176 PF14851.6 ORF86285 - 6.6 6.4 12.1 1.2 8.8 0.3 3.2 2 1 0 2 2 2 0 FAM176 family Flavodoxin_1 PF00258.25 ORF64336 - 2.3e-19 70.0 0.3 4.6e-19 69.1 0.1 1.6 2 0 0 2 2 2 1 Flavodoxin FAD_binding_1 PF00667.20 ORF64336 - 1.5e-10 41.1 0.0 0.00019 21.1 0.0 2.6 1 1 1 2 2 2 2 FAD binding domain NAD_binding_1 PF00175.21 ORF64336 - 5.4e-07 30.2 0.4 1.8e-06 28.5 0.0 2.2 2 1 0 2 2 2 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 ORF64336 - 0.027 14.6 0.4 0.66 10.1 0.4 2.8 1 1 0 1 1 1 0 Ferric reductase NAD binding domain AMP-binding PF00501.28 ORF51806 - 5.5e-99 331.6 0.0 6.5e-99 331.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF51806 - 1.2e-13 51.8 0.0 2.7e-13 50.7 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain CSG2 PF16965.5 ORF147638 - 0.56 9.1 2.3 0.61 9.0 0.2 2.1 2 1 0 2 2 2 0 Ceramide synthase regulator Phage_holin_3_6 PF07332.11 ORF147638 - 1.9 8.6 8.6 0.074 13.1 1.5 2.2 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III Hydrolase_4 PF12146.8 ORF87997 - 1.7e-05 24.3 0.0 0.045 13.0 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 KaiA PF07688.12 ORF87088 - 1.6 8.9 9.4 2.5 8.3 0.4 3.8 2 1 1 3 3 3 0 KaiA C-terminal domain Kelch_1 PF01344.25 ORF81321 - 7.9e-25 86.2 5.8 7.5e-09 35.0 0.1 5.6 6 0 0 6 6 6 4 Kelch motif Kelch_6 PF13964.6 ORF81321 - 3.4e-19 68.4 7.4 1.1e-05 25.5 0.1 5.4 4 1 1 5 5 5 4 Kelch motif Kelch_4 PF13418.6 ORF81321 - 3.4e-18 65.4 0.3 0.00012 22.0 0.0 5.4 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF81321 - 2.6e-14 52.8 2.7 0.00028 20.8 0.1 4.9 4 0 0 4 4 4 4 Kelch motif Kelch_3 PF13415.6 ORF81321 - 6.4e-09 35.9 0.1 0.086 13.2 0.0 5.3 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF81321 - 2.6e-07 30.3 10.0 0.0029 17.5 0.0 4.8 5 0 0 5 5 5 3 Kelch motif SKA1 PF07160.12 ORF81321 - 4.2 7.1 18.5 0.54 10.1 10.7 2.5 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 Pkinase PF00069.25 ORF66687 - 4.3e-72 242.7 0.2 6.5e-72 242.1 0.2 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF66687 - 1e-40 139.6 0.0 1.7e-40 139.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase POLO_box PF00659.18 ORF66687 - 2.5e-39 133.3 4.3 1e-19 70.5 0.2 2.7 2 0 0 2 2 2 2 POLO box duplicated region Kinase-like PF14531.6 ORF66687 - 5.2e-08 32.6 0.0 5.2e-07 29.3 0.0 2.1 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF66687 - 9.8e-07 27.9 2.2 1.1e-06 27.8 0.1 2.0 2 0 0 2 2 2 1 Fungal protein kinase ThrE PF06738.12 ORF45597 - 1.4e-06 27.9 12.8 1.4e-06 27.9 12.8 1.9 2 0 0 2 2 2 1 Putative threonine/serine exporter CPP1-like PF11833.8 ORF45597 - 0.084 12.5 0.7 10 5.7 0.0 2.5 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like malic PF00390.19 ORF30678 - 1.2e-23 83.9 0.1 1.3e-15 57.7 0.0 3.3 2 1 1 3 3 3 2 Malic enzyme, N-terminal domain Malic_M PF03949.15 ORF30678 - 8.8e-23 80.9 0.1 3.4e-22 78.9 0.1 1.9 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain RIIa PF02197.17 ORF30678 - 4.2e-08 32.7 0.0 9e-08 31.7 0.0 1.6 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit AvrM-A PF18241.1 ORF30678 - 0.54 10.7 7.0 4.5 7.7 0.2 2.7 2 0 0 2 2 2 0 Flax-rust effector AvrM-A TCTP PF00838.17 ORF30678 - 0.62 10.4 3.0 0.78 10.1 1.1 1.9 2 0 0 2 2 2 0 Translationally controlled tumour protein EF-hand_7 PF13499.6 ORF20592 - 4.8e-09 36.5 4.0 0.064 13.7 1.4 5.0 4 2 1 5 5 5 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF20592 - 1.8e-08 33.6 0.6 0.0087 15.9 0.0 5.2 5 0 0 5 5 5 2 EF-hand domain EF-hand_1 PF00036.32 ORF20592 - 2.7e-08 32.8 0.9 0.018 14.6 0.0 5.1 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 ORF20592 - 0.0026 17.5 0.6 4.1 7.3 0.1 4.1 4 0 0 4 4 4 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF20592 - 0.021 15.1 0.0 0.75 10.2 0.0 2.7 2 0 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 ORF20592 - 0.027 13.9 1.8 0.18 11.4 0.0 3.0 3 0 0 3 3 3 0 EF hand DUF5522 PF17653.1 ORF106028 - 1.3 9.1 13.4 0.14 12.1 5.3 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5522) Cytochrome_C7 PF14522.6 ORF103908 - 2.1e-05 24.4 26.5 0.0093 15.9 4.9 4.1 3 1 2 5 5 5 3 Cytochrome c7 and related cytochrome c Paired_CXXCH_1 PF09699.10 ORF103908 - 3.1e-05 23.6 29.7 0.00035 20.3 5.2 4.4 3 1 2 5 5 5 4 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_c3_2 PF14537.6 ORF103908 - 0.00028 21.3 25.6 0.011 16.1 20.0 3.3 2 1 0 2 2 2 1 Cytochrome c3 Cytochrome_C554 PF13435.6 ORF103908 - 0.00035 21.4 17.2 0.072 14.0 1.3 3.9 4 0 0 4 4 4 2 Cytochrome c554 and c-prime Cytochrom_CIII PF02085.16 ORF103908 - 0.00037 20.8 19.4 0.12 12.7 5.4 3.6 1 1 2 3 3 3 3 Class III cytochrome C family Cytochrom_C552 PF02335.15 ORF103908 - 0.0022 17.0 3.6 0.0022 17.0 3.6 3.1 2 1 1 3 3 3 1 Cytochrome c552 Cytochrom_NNT PF03264.14 ORF103908 - 4.3 7.0 24.6 33 4.1 0.2 3.6 2 1 1 3 3 3 0 NapC/NirT cytochrome c family, N-terminal region DUF1924 PF09086.11 ORF103908 - 5.8 7.3 20.9 0.53 10.7 0.6 5.0 1 1 4 5 5 5 0 Domain of unknown function (DUF1924) Condensation PF00668.20 ORF96249 - 0.0019 17.0 0.0 0.34 9.5 0.0 2.8 3 0 0 3 3 3 2 Condensation domain DUF4116 PF13475.6 ORF79127 - 2.6e-109 356.8 0.0 6.5e-12 45.0 0.0 12.5 8 4 5 13 13 13 13 Domain of unknown function (DUF4116) MotCF PF09158.10 ORF79127 - 0.0035 17.4 0.0 0.45 10.6 0.0 3.4 2 1 0 2 2 2 1 Bacteriophage T4 MotA, C-terminal AfsA PF03756.13 ORF79127 - 0.021 14.8 1.5 0.91 9.5 0.1 3.8 3 1 0 4 4 4 0 A-factor biosynthesis hotdog domain XPC-binding PF09280.11 ORF79127 - 0.13 12.0 0.0 0.66 9.8 0.0 2.3 2 0 0 2 2 2 0 XPC-binding domain Jag_N PF14804.6 ORF79127 - 0.37 11.2 1.9 0.56 10.6 0.7 1.9 2 0 0 2 2 2 0 Jag N-terminus Pkinase PF00069.25 ORF45266 - 2.7e-14 53.2 0.0 4.8e-14 52.4 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain SspB PF04386.13 ORF45266 - 0.12 12.3 0.4 0.26 11.2 0.0 1.7 2 0 0 2 2 2 0 Stringent starvation protein B UCH PF00443.29 ORF31894 - 3.3e-64 216.8 1.3 3.3e-64 216.8 1.3 1.7 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF31894 - 2.7e-19 69.9 0.4 2.7e-19 69.9 0.4 2.9 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase Act-Frag_cataly PF09192.10 ORF110413 - 4.6e-19 68.9 0.0 1.1e-18 67.7 0.0 1.5 1 1 0 1 1 1 1 Actin-fragmin kinase, catalytic DUF4614 PF15391.6 ORF110413 - 0.017 15.1 0.2 0.027 14.5 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) PPR_2 PF13041.6 ORF87450 - 4.2e-35 119.7 0.0 4.3e-09 36.4 0.0 9.2 6 1 2 9 9 9 6 PPR repeat family PPR PF01535.20 ORF87450 - 1.4e-23 81.4 8.5 5.9e-05 23.0 0.0 10.5 12 0 0 12 12 12 6 PPR repeat PPR_3 PF13812.6 ORF87450 - 2.9e-17 62.5 0.0 0.015 15.4 0.0 6.8 5 2 5 10 10 10 6 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF87450 - 1.5e-14 53.3 0.2 0.0033 17.1 0.0 9.7 11 0 0 11 11 11 3 PPR repeat PPR_long PF17177.4 ORF87450 - 2.8e-06 26.9 0.6 0.014 14.8 0.0 3.9 2 1 2 4 4 4 2 Pentacotripeptide-repeat region of PRORP DiS_P_DiS PF06750.13 ORF87450 - 0.058 13.5 0.2 0.69 10.1 0.0 2.8 3 0 0 3 3 3 0 Bacterial Peptidase A24 N-terminal domain tRNA-synt_2 PF00152.20 ORF8705 - 4.4e-74 249.4 0.1 7.4e-74 248.6 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 ORF8705 - 5.6e-07 29.5 0.1 1.3e-06 28.3 0.1 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 ORF8705 - 0.0019 17.8 0.6 1 8.8 0.4 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Plavaka PF18759.1 ORF8705 - 0.063 12.5 0.1 0.098 11.9 0.1 1.2 1 0 0 1 1 1 0 Plavaka transposase Inhibitor_I71 PF12628.7 ORF8705 - 0.69 9.7 7.4 2.1 8.1 1.7 3.1 3 0 0 3 3 3 0 Falstatin, cysteine peptidase inhibitor NARP1 PF12569.8 ORF8705 - 1.3 7.9 8.2 2.3 7.0 8.2 1.3 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Glyco_hydro_3_C PF01915.22 ORF86292 - 1.3e-51 175.5 0.0 1.9e-51 175.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Glyco_hydro_3 PF00933.21 ORF86292 - 1.6e-33 116.5 0.0 3.6e-33 115.3 0.0 1.6 1 1 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Fn3-like PF14310.6 ORF86292 - 4.4e-16 58.7 0.1 1.4e-15 57.2 0.0 1.9 2 0 0 2 2 2 1 Fibronectin type III-like domain MFS_2 PF13347.6 ORF80768 - 1.4e-23 83.2 19.3 9.2e-13 47.5 10.0 3.0 2 1 0 2 2 2 2 MFS/sugar transport protein MFS_1 PF07690.16 ORF80768 - 2.6e-21 75.9 2.9 7.9e-15 54.6 0.7 2.6 2 1 0 2 2 2 2 Major Facilitator Superfamily Pkinase PF00069.25 ORF67543 - 7.3e-42 143.5 0.0 1.1e-41 143.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67543 - 3.4e-32 111.7 0.0 4.9e-32 111.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF67543 - 0.00013 21.4 0.0 0.00024 20.5 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF67543 - 0.00036 19.4 0.0 0.00056 18.8 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF67543 - 0.049 13.0 0.0 0.091 12.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DNA_ligase_OB_2 PF14743.6 ORF67543 - 0.09 12.8 0.1 0.19 11.8 0.1 1.4 1 0 0 1 1 1 0 DNA ligase OB-like domain RuBisCO_large PF00016.20 ORF29344 - 3.3e-99 331.8 0.0 6.3e-99 330.9 0.0 1.4 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 ORF29344 - 5e-35 120.3 0.0 8.3e-35 119.6 0.0 1.3 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain Glyco_hydro_3_C PF01915.22 ORF20287 - 1.3e-51 175.5 0.0 1.9e-51 175.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Glyco_hydro_3 PF00933.21 ORF20287 - 1.6e-33 116.5 0.0 3.6e-33 115.3 0.0 1.6 1 1 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Fn3-like PF14310.6 ORF20287 - 4.4e-16 58.7 0.1 1.4e-15 57.2 0.0 1.9 2 0 0 2 2 2 1 Fibronectin type III-like domain TPR_10 PF13374.6 ORF112794 - 1.4e-78 256.9 21.6 5.1e-12 45.2 0.4 9.8 9 0 0 9 9 9 9 Tetratricopeptide repeat TPR_12 PF13424.6 ORF112794 - 4.1e-69 228.8 30.3 1.5e-16 60.4 3.0 6.9 2 2 6 8 8 8 6 Tetratricopeptide repeat TPR_1 PF00515.28 ORF112794 - 3e-22 77.4 6.5 0.015 15.1 0.7 8.4 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_7 PF13176.6 ORF112794 - 3.1e-17 61.3 14.4 0.046 13.8 0.4 8.3 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF112794 - 1.8e-16 58.8 8.4 0.01 15.9 0.7 7.7 8 0 0 8 8 7 5 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF112794 - 2.5e-15 56.7 15.7 8.9e-06 25.3 5.6 3.4 1 1 2 3 3 3 3 MalT-like TPR region TPR_16 PF13432.6 ORF112794 - 4.4e-14 52.8 8.1 0.18 12.5 0.0 6.9 6 1 0 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF112794 - 5.5e-11 41.8 4.1 0.24 11.7 0.2 7.2 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF112794 - 6.7e-11 41.7 12.6 1 10.2 0.3 7.9 8 0 0 8 8 7 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF112794 - 1.8e-09 37.6 21.8 0.092 13.6 0.4 8.8 11 0 0 11 11 7 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF112794 - 7.6e-09 35.3 6.3 1.2 9.7 0.0 7.0 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_3 PF07720.12 ORF112794 - 1.7e-07 31.0 1.3 0.2 11.7 0.1 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF112794 - 8.2e-07 29.5 16.0 0.034 14.6 2.1 5.7 3 1 1 5 5 5 2 Tetratricopeptide repeat PPR PF01535.20 ORF112794 - 0.0038 17.4 0.0 30 5.1 0.0 5.1 6 0 0 6 6 5 0 PPR repeat TPR_5 PF12688.7 ORF112794 - 0.009 16.3 15.9 0.12 12.6 0.2 3.9 5 1 0 5 5 3 2 Tetratrico peptide repeat ANAPC3 PF12895.7 ORF112794 - 0.018 15.3 6.1 4.5 7.6 0.4 4.4 2 1 1 4 4 4 0 Anaphase-promoting complex, cyclosome, subunit 3 Leuk-A4-hydro_C PF09127.11 ORF112794 - 0.13 12.4 0.1 7 6.8 0.0 3.2 3 1 1 4 4 3 0 Leukotriene A4 hydrolase, C-terminal RPN6_N PF18055.1 ORF112794 - 0.18 12.2 4.8 19 5.6 0.3 4.0 1 1 3 5 5 5 0 26S proteasome regulatory subunit RPN6 N-terminal domain Mating_N PF12731.7 ORF112794 - 0.26 11.4 2.3 25 5.1 0.0 3.8 4 0 0 4 4 3 0 Mating-type protein beta 1 PPR_1 PF12854.7 ORF112794 - 0.28 10.9 5.1 12 5.7 0.0 3.9 4 0 0 4 4 4 0 PPR repeat DUF4404 PF14357.6 ORF112794 - 0.31 11.7 21.2 2.1 9.0 0.5 5.9 4 2 2 6 6 6 0 Domain of unknown function (DUF4404) DUF1841 PF08897.11 ORF112794 - 2.6 8.1 9.4 7.1 6.7 0.5 3.8 2 1 2 4 4 4 0 Domain of unknown function (DUF1841) TPR_11 PF13414.6 ORF112794 - 7.7 6.3 6.3 36 4.1 0.1 3.7 4 0 0 4 4 4 0 TPR repeat Ank_2 PF12796.7 ORF10443 - 2.7e-12 47.1 0.9 0.00062 20.3 0.0 4.0 4 0 0 4 4 4 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF10443 - 1.5e-09 37.3 1.1 0.001 19.4 0.0 4.8 5 0 0 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF10443 - 4.3e-06 26.9 4.3 0.021 15.1 0.0 4.6 4 1 0 4 4 4 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF10443 - 6.3e-06 26.6 0.3 0.0076 16.8 0.0 3.6 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF10443 - 0.0034 17.8 0.1 0.66 10.5 0.0 3.2 3 0 0 3 3 3 1 Ankyrin repeat DUF615 PF04751.14 ORF10443 - 0.12 12.3 0.0 0.72 9.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF615) RuBisCO_large PF00016.20 ORF100549 - 3.3e-97 325.3 0.0 6.2e-97 324.4 0.0 1.4 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 ORF100549 - 5e-35 120.3 0.0 8.3e-35 119.6 0.0 1.3 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain HipA_C PF07804.12 NODE_4758_length_1754_cov_3158.121582_g3406_i0reverse_frame_3 - 0.074 12.7 0.1 0.18 11.4 0.1 1.6 1 0 0 1 1 1 0 HipA-like C-terminal domain NAPRTase PF04095.16 ORF92594 - 3.7e-61 206.8 0.0 5e-61 206.4 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF5598 PF18127.1 ORF92594 - 1.4e-40 137.7 0.1 4.4e-40 136.1 0.1 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF5598) NAPRTase PF04095.16 ORF34935 - 3.7e-61 206.8 0.0 5e-61 206.4 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF5598 PF18127.1 ORF34935 - 1.4e-40 137.7 0.1 4.4e-40 136.1 0.1 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF5598) NAPRTase PF04095.16 ORF139667 - 3.7e-61 206.8 0.0 5e-61 206.4 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF5598 PF18127.1 ORF139667 - 1.4e-40 137.7 0.1 4.4e-40 136.1 0.1 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF5598) LPP PF04728.13 ORF117959 - 0.57 10.6 3.1 5.2 7.5 0.1 3.3 2 1 0 2 2 2 0 Lipoprotein leucine-zipper OmpH PF03938.14 ORF117959 - 1 9.7 20.8 0.057 13.8 1.0 3.5 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) Cornifin PF02389.15 NODE_4800_length_1750_cov_327.858892_g3440_i0reverse_frame_3 - 4e-06 27.1 30.5 0.0041 17.3 3.2 4.0 1 1 3 4 4 4 4 Cornifin (SPRR) family Radial_spoke_3 PF06098.11 ORF91868 - 5e-78 262.3 12.6 5e-78 262.3 12.6 2.6 2 1 1 3 3 3 1 Radial spoke protein 3 DUF2600 PF10776.9 ORF91868 - 0.0053 15.7 0.8 0.013 14.4 0.8 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2600) 4PPT_N PF17837.1 ORF71866 - 0.0052 16.9 10.0 3.4 7.8 0.1 5.2 4 1 1 5 5 5 2 4'-phosphopantetheinyl transferase N-terminal domain Trypan_PARP PF05887.11 ORF71866 - 0.0063 16.5 1.7 0.012 15.6 1.7 1.4 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) Pkinase PF00069.25 ORF56269 - 3.8e-70 236.3 0.1 6.5e-70 235.5 0.1 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF56269 - 8.8e-35 120.2 0.1 1.8e-34 119.2 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase Myosin_TH1 PF06017.13 ORF56269 - 2.2e-15 56.8 1.0 5.3e-15 55.6 1.0 1.6 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding Haspin_kinase PF12330.8 ORF56269 - 1.4e-05 24.2 0.5 3.1e-05 23.1 0.5 1.7 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF56269 - 6.3e-05 22.4 0.2 0.00013 21.4 0.2 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF56269 - 0.00021 20.7 0.0 0.00034 20.0 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF56269 - 0.00027 19.9 0.1 0.00066 18.6 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF56269 - 0.00084 19.3 0.0 0.0017 18.3 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF56269 - 0.0076 15.9 0.0 0.02 14.5 0.0 1.7 1 0 0 1 1 1 1 Choline/ethanolamine kinase DUF1614 PF07758.11 ORF56269 - 0.22 11.5 0.1 0.39 10.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1614) Aminotran_1_2 PF00155.21 ORF48476 - 5.6e-41 140.9 0.0 7.5e-41 140.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Acyl-ACP_TE PF01643.17 ORF48476 - 3e-05 23.5 0.0 4.6e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Acyl-ACP thioesterase Cys_Met_Meta_PP PF01053.20 ORF48476 - 0.002 16.7 0.0 0.0029 16.2 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 ORF48476 - 0.004 16.2 0.0 0.013 14.4 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V SHMT PF00464.19 ORF48476 - 0.053 12.1 0.0 0.091 11.3 0.0 1.4 1 1 0 1 1 1 0 Serine hydroxymethyltransferase DegT_DnrJ_EryC1 PF01041.17 ORF48476 - 0.15 11.4 0.1 7 5.9 0.0 2.4 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family 4PPT_N PF17837.1 ORF439 - 0.0052 16.9 10.0 3.4 7.8 0.1 5.2 4 1 1 5 5 5 2 4'-phosphopantetheinyl transferase N-terminal domain Trypan_PARP PF05887.11 ORF439 - 0.0063 16.5 1.7 0.012 15.6 1.7 1.4 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) DUF2207 PF09972.9 ORF4119 - 0.0027 16.5 4.6 0.31 9.7 2.0 2.5 2 1 0 2 2 2 2 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF4119 - 0.0033 17.7 10.9 0.86 9.9 2.5 3.4 3 0 0 3 3 3 2 Protein of unknown function (DUF4064) SUR7 PF06687.12 ORF4119 - 1.5 8.4 0.0 1.5 8.4 0.0 3.3 2 1 0 2 2 2 0 SUR7/PalI family DUF1218 PF06749.12 ORF4119 - 5.8 7.5 6.5 16 6.1 0.2 3.0 4 0 0 4 4 4 0 Protein of unknown function (DUF1218) PARP PF00644.20 ORF29719 - 5.3e-55 186.0 1.8 1.7e-54 184.4 0.7 2.1 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase catalytic domain PARP_reg PF02877.14 ORF29719 - 5.4e-24 84.8 1.5 9.2e-24 84.1 1.5 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase, regulatory domain WGR PF05406.15 ORF29719 - 1.9e-19 69.5 1.2 4.7e-19 68.2 1.2 1.7 1 0 0 1 1 1 1 WGR domain 4PPT_N PF17837.1 ORF145413 - 0.0052 16.9 10.0 3.4 7.8 0.1 5.2 4 1 1 5 5 5 2 4'-phosphopantetheinyl transferase N-terminal domain Trypan_PARP PF05887.11 ORF145413 - 0.0063 16.5 1.7 0.012 15.6 1.7 1.4 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) PA14 PF07691.12 ORF144609 - 2e-12 47.2 0.5 5.4e-12 45.7 0.5 1.8 1 0 0 1 1 1 1 PA14 domain DUF4215 PF13948.6 ORF144609 - 5.5e-07 29.9 12.2 5.5e-07 29.9 12.2 3.8 4 0 0 4 4 3 1 Domain of unknown function (DUF4215) Nucleoside_tran PF01733.18 ORF144609 - 0.0043 16.5 2.2 0.0085 15.5 2.2 1.5 1 0 0 1 1 1 1 Nucleoside transporter DUF2670 PF10875.8 ORF144609 - 0.015 15.4 1.6 0.035 14.2 1.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) Fibrinogen_BP PF08017.11 ORF144609 - 0.016 13.6 13.9 0.025 13.0 13.9 1.2 1 0 0 1 1 1 0 Fibrinogen binding protein Zip PF02535.22 ORF144609 - 0.023 13.9 4.6 0.039 13.2 4.6 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF144609 - 0.081 11.7 10.1 0.15 10.8 10.1 1.4 1 0 0 1 1 1 0 Presenilin MMM1 PF10296.9 ORF144609 - 0.089 11.8 7.0 0.21 10.6 7.0 1.5 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Serinc PF03348.15 ORF144609 - 0.2 10.6 3.4 0.36 9.7 3.4 1.4 1 0 0 1 1 1 0 Serine incorporator (Serinc) SID-1_RNA_chan PF13965.6 ORF144609 - 0.21 10.0 6.5 0.33 9.3 6.5 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 RNA_pol_Rpc4 PF05132.14 ORF144609 - 0.24 11.8 5.5 0.56 10.6 5.5 1.6 1 0 0 1 1 1 0 RNA polymerase III RPC4 EMC3_TMCO1 PF01956.16 ORF144609 - 0.39 10.4 3.3 0.86 9.3 3.3 1.5 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like V_ATPase_I PF01496.19 ORF144609 - 0.45 8.4 13.9 0.015 13.2 7.8 1.5 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family O-antigen_lig PF13425.6 ORF144609 - 0.67 8.7 13.0 1.1 8.0 13.0 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein MAP17 PF15807.5 ORF144609 - 1.4 9.2 12.6 3.7 7.8 12.6 1.7 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Neur_chan_memb PF02932.16 ORF144609 - 1.6 8.7 4.9 2.4 8.1 4.0 1.7 2 0 0 2 2 2 0 Neurotransmitter-gated ion-channel transmembrane region SLC12 PF03522.15 ORF144609 - 1.6 7.6 11.3 0.86 8.6 8.9 1.7 2 0 0 2 2 2 0 Solute carrier family 12 CLN3 PF02487.17 ORF144609 - 4.2 6.3 5.9 7.4 5.5 5.9 1.3 1 0 0 1 1 1 0 CLN3 protein Mem_trans PF03547.18 ORF144609 - 9.3 4.5 7.3 15 3.9 4.6 2.0 2 0 0 2 2 2 0 Membrane transport protein GLTP PF08718.11 ORF142660 - 3.2 8.0 5.3 0.44 10.8 0.7 2.0 2 0 0 2 2 2 0 Glycolipid transfer protein (GLTP) PA14 PF07691.12 ORF129330 - 2.2e-12 47.0 0.5 5.4e-12 45.7 0.5 1.7 1 0 0 1 1 1 1 PA14 domain DUF4215 PF13948.6 ORF129330 - 5.5e-07 29.9 12.2 5.5e-07 29.9 12.2 4.6 5 0 0 5 5 3 1 Domain of unknown function (DUF4215) Nucleoside_tran PF01733.18 ORF129330 - 0.0037 16.7 1.6 0.0063 15.9 1.6 1.3 1 0 0 1 1 1 1 Nucleoside transporter DUF2670 PF10875.8 ORF129330 - 0.026 14.6 0.9 0.061 13.4 0.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) MMM1 PF10296.9 ORF129330 - 0.036 13.1 4.1 0.083 11.9 4.1 1.5 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Serinc PF03348.15 ORF129330 - 0.084 11.8 2.0 0.17 10.7 2.0 1.5 1 0 0 1 1 1 0 Serine incorporator (Serinc) Zip PF02535.22 ORF129330 - 0.12 11.5 1.7 0.21 10.7 1.7 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF129330 - 0.13 11.0 4.1 0.24 10.1 4.1 1.4 1 0 0 1 1 1 0 Presenilin EMC3_TMCO1 PF01956.16 ORF129330 - 0.33 10.7 2.6 0.62 9.8 2.6 1.4 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like O-antigen_lig PF13425.6 ORF129330 - 0.51 9.1 10.7 0.83 8.4 10.7 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein V_ATPase_I PF01496.19 ORF129330 - 0.55 8.1 10.1 0.019 12.9 4.1 1.5 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family MAP17 PF15807.5 ORF129330 - 0.56 10.4 8.1 1.5 9.1 8.1 1.7 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF4834 PF16118.5 ORF129330 - 1.4 10.0 11.6 0.17 12.9 5.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) CMAS PF02353.20 ORF123965 - 3.6e-58 197.0 0.0 8.9e-34 117.0 0.0 2.6 2 1 0 2 2 2 2 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 ORF123965 - 2.7e-12 46.9 0.0 4e-10 39.8 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF123965 - 2.9e-12 47.1 0.0 5.6e-11 43.0 0.0 2.8 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF123965 - 3.2e-12 46.9 0.0 1.5e-09 38.4 0.0 3.8 3 1 0 3 3 3 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF123965 - 8.2e-10 38.7 0.0 1.5e-09 37.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF123965 - 3.8e-08 34.0 0.0 5e-07 30.4 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF123965 - 0.00026 20.5 0.0 0.00072 19.1 0.0 1.7 1 0 0 1 1 1 1 Putative methyltransferase FtsJ PF01728.19 ORF123965 - 0.00077 19.6 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase DUF938 PF06080.12 ORF123965 - 0.002 18.0 0.0 0.0045 16.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF938) MTS PF05175.14 ORF123965 - 0.004 16.7 0.0 0.021 14.4 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain PCMT PF01135.19 ORF123965 - 0.013 15.3 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltr_RsmB-F PF01189.17 ORF123965 - 0.11 12.1 0.0 0.49 10.0 0.0 2.0 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F tRNA_U5-meth_tr PF05958.11 ORF123965 - 0.21 10.5 0.1 0.51 9.3 0.0 1.6 2 0 0 2 2 2 0 tRNA (Uracil-5-)-methyltransferase 4PPT_N PF17837.1 ORF116862 - 0.0052 16.9 10.0 3.4 7.8 0.1 5.2 4 1 1 5 5 5 2 4'-phosphopantetheinyl transferase N-terminal domain Trypan_PARP PF05887.11 ORF116862 - 0.0063 16.5 1.7 0.012 15.6 1.7 1.4 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) 4PPT_N PF17837.1 ORF113766 - 0.0052 16.9 10.0 3.4 7.8 0.1 5.2 4 1 1 5 5 5 2 4'-phosphopantetheinyl transferase N-terminal domain Trypan_PARP PF05887.11 ORF113766 - 0.0063 16.5 1.7 0.012 15.6 1.7 1.4 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) HOOK PF05622.12 ORF111556 - 2.4e-29 102.0 81.1 5.3e-29 100.9 81.1 1.5 1 1 0 1 1 1 1 HOOK protein CH PF00307.31 ORF111556 - 0.0039 17.3 0.2 0.0039 17.3 0.2 3.9 3 1 1 4 4 4 1 Calponin homology (CH) domain CAMSAP_CH PF11971.8 ORF111556 - 0.0045 16.8 0.1 0.021 14.6 0.1 2.2 1 0 0 1 1 1 1 CAMSAP CH domain Rootletin PF15035.6 ORF111556 - 0.0075 16.3 9.6 0.0075 16.3 9.6 4.7 1 1 3 4 4 4 2 Ciliary rootlet component, centrosome cohesion DivIC PF04977.15 ORF111556 - 0.01 15.6 5.6 0.01 15.6 5.6 9.6 3 3 7 10 10 10 0 Septum formation initiator bZIP_1 PF00170.21 ORF111556 - 0.013 15.5 2.6 0.013 15.5 2.6 9.9 2 2 9 11 11 11 0 bZIP transcription factor DASH_Hsk3 PF08227.11 ORF111556 - 0.77 10.2 3.2 25 5.3 0.4 3.5 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like KASH_CCD PF14662.6 ORF111556 - 3 7.6 93.1 3.5 7.4 18.3 4.8 1 1 3 4 4 4 0 Coiled-coil region of CCDC155 or KASH GAS PF13851.6 ORF111556 - 8 5.8 96.5 0.58 9.5 14.9 4.4 1 1 2 4 4 4 0 Growth-arrest specific micro-tubule binding YabA PF06156.13 ORF111556 - 8.2 7.1 74.5 0.04 14.6 10.6 6.5 1 1 5 6 6 6 0 Initiation control protein YabA Suf PF05843.14 ORF104612 - 1.2e-07 32.1 3.6 0.0015 18.6 0.2 3.4 2 1 1 3 3 3 2 Suppressor of forked protein (Suf) TPR_14 PF13428.6 ORF104612 - 0.0007 20.2 20.0 0.39 11.6 0.0 7.5 4 3 4 8 8 8 2 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 ORF104612 - 0.0013 18.7 4.9 2.7 8.0 0.1 4.1 4 1 0 5 5 5 2 Mad3/BUB1 homology region 1 Cas_Csy4 PF09618.10 ORF104612 - 0.07 13.3 0.1 0.16 12.1 0.1 1.5 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) TOM20_plant PF06552.12 ORF104612 - 0.071 12.9 0.4 0.33 10.7 0.2 2.2 2 0 0 2 2 2 0 Plant specific mitochondrial import receptor subunit TOM20 BET PF17035.5 ORF104612 - 0.49 10.6 4.2 16 5.8 1.2 2.6 2 0 0 2 2 2 0 Bromodomain extra-terminal - transcription regulation TPR_2 PF07719.17 ORF104612 - 0.51 10.6 10.6 9.3 6.6 0.0 5.9 6 0 0 6 6 6 0 Tetratricopeptide repeat ERM PF00769.19 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 3e-05 23.9 23.7 3e-05 23.9 23.7 3.1 3 0 0 3 3 3 1 Ezrin/radixin/moesin family GAS PF13851.6 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 0.00078 18.8 25.2 0.00078 18.8 25.2 3.5 2 1 1 3 3 3 2 Growth-arrest specific micro-tubule binding YjbH PF06082.11 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 0.47 9.2 9.5 0.65 8.7 9.5 1.3 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH KASH_CCD PF14662.6 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 2.6 7.8 57.8 0.76 9.6 19.5 4.3 3 1 1 4 4 4 0 Coiled-coil region of CCDC155 or KASH DUF5082 PF16888.5 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 2.9 8.2 39.2 4.8 7.5 16.8 4.4 4 0 0 4 4 4 0 Domain of unknown function (DUF5082) SpoOE-like PF09388.10 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 3.6 7.6 12.0 0.84 9.6 0.3 3.8 3 0 0 3 3 3 0 Spo0E like sporulation regulatory protein HALZ PF02183.18 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 4.9 7.4 35.6 0.22 11.8 2.4 6.3 6 1 1 7 7 7 0 Homeobox associated leucine zipper YabA PF06156.13 NODE_4816_length_1749_cov_96.193116_g3452_i0reverse_frame_3 - 7.9 7.2 43.6 0.35 11.5 10.6 4.9 3 2 1 4 4 4 0 Initiation control protein YabA AMP-binding PF00501.28 ORF81873 - 7.7e-55 186.2 0.0 1e-54 185.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF81873 - 2.3e-07 31.7 0.1 7.5e-07 30.0 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 ORF81873 - 0.0038 16.1 0.0 0.047 12.6 0.0 2.1 2 0 0 2 2 2 1 GH3 auxin-responsive promoter ubiquitin PF00240.23 ORF75040 - 8.2e-29 99.2 0.3 8.2e-29 99.2 0.3 1.9 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF75040 - 1.9e-14 53.2 0.4 5.6e-14 51.7 0.4 1.9 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF75040 - 0.0027 18.1 0.1 0.011 16.1 0.1 2.2 1 0 0 1 1 1 1 Ubiquitin-like domain DUF4139 PF13598.6 ORF75040 - 0.0094 15.7 0.0 0.024 14.4 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4139) TBK1_ULD PF18396.1 ORF75040 - 0.04 13.8 0.1 0.12 12.3 0.1 1.8 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain DUF948 PF06103.11 ORF75040 - 3.2 8.1 7.6 49 4.3 0.1 3.4 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Ion_trans PF00520.31 ORF69194 - 7.7e-05 22.0 9.6 0.00013 21.3 9.6 1.3 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 ORF69194 - 0.16 11.8 3.3 0.049 13.5 0.3 1.7 2 0 0 2 2 2 0 Ligand-gated ion channel Pkinase PF00069.25 ORF60482 - 5.4e-69 232.5 0.3 9.3e-69 231.7 0.3 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60482 - 1.7e-36 125.8 0.0 2.4e-36 125.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Myosin_TH1 PF06017.13 ORF60482 - 4.5e-14 52.5 1.3 9.4e-14 51.5 1.3 1.5 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding Kinase-like PF14531.6 ORF60482 - 4.1e-06 26.3 0.0 7.1e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF60482 - 9.4e-06 24.8 0.2 1.6e-05 24.0 0.2 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF60482 - 0.00015 20.7 0.1 0.00029 19.7 0.1 1.4 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF60482 - 0.0004 19.8 0.1 0.00078 18.8 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family PH_3 PF14593.6 ORF60482 - 0.001 19.1 0.8 0.0031 17.6 0.8 1.8 1 0 0 1 1 1 1 PH domain Seadorna_VP7 PF07387.11 ORF60482 - 0.0012 18.0 1.9 0.007 15.5 0.0 2.2 2 0 0 2 2 2 1 Seadornavirus VP7 APH PF01636.23 ORF60482 - 0.0022 18.0 0.0 0.0037 17.2 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF60482 - 0.026 14.1 0.2 0.089 12.4 0.0 2.0 2 0 0 2 2 2 0 RIO1 family FTA2 PF13095.6 ORF60482 - 0.03 13.9 0.3 3.5 7.2 0.0 2.4 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 PTEN_C2 PF10409.9 ORF52951 - 3.5e-17 62.4 1.6 7.4e-17 61.4 1.6 1.6 1 0 0 1 1 1 1 C2 domain of PTEN tumour-suppressor protein Y_phosphatase PF00102.27 ORF52951 - 2.9e-07 30.3 0.0 2.9e-07 30.3 0.0 2.2 2 1 1 3 3 3 1 Protein-tyrosine phosphatase DSPc PF00782.20 ORF52951 - 9.3e-07 28.7 0.1 9.3e-07 28.7 0.1 2.8 3 1 0 3 3 3 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 ORF52951 - 5.8e-06 26.4 0.0 2.2e-05 24.5 0.0 1.9 2 0 0 2 2 2 1 Tyrosine phosphatase family PTPlike_phytase PF14566.6 ORF52951 - 0.035 14.2 2.9 0.045 13.9 0.0 2.5 2 1 0 2 2 2 0 Inositol hexakisphosphate Pyridoxal_deC PF00282.19 ORF48041 - 8.8e-18 64.2 0.0 1.2e-17 63.7 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 ORF48041 - 3.5e-14 52.6 0.2 1.7e-13 50.3 0.1 2.0 1 1 1 2 2 2 1 Aminotransferase class-V HKR_ArcB_TM PF18415.1 ORF48041 - 0.03 15.1 0.5 0.079 13.8 0.5 1.7 1 0 0 1 1 1 0 Histidine kinase receptor ArcB trans-membrane domain DUF2935 PF11155.8 ORF48041 - 0.072 13.4 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) Nup188_C PF18378.1 ORF48041 - 0.085 11.7 0.0 0.14 10.9 0.0 1.2 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain Beta_elim_lyase PF01212.21 ORF48041 - 0.17 11.1 1.2 0.75 9.0 0.2 2.1 1 1 0 2 2 2 0 Beta-eliminating lyase RuBisCO_large PF00016.20 ORF43364 - 6.1e-98 327.7 0.0 1.2e-97 326.8 0.0 1.4 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 ORF43364 - 5e-35 120.3 0.0 8.2e-35 119.6 0.0 1.3 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain Arc_C PF18162.1 ORF34181 - 0.038 13.8 0.7 1.2 9.1 0.0 2.7 2 1 0 2 2 2 0 Arc C-lobe SAICAR_synt PF01259.18 ORF31435 - 0.011 15.4 0.1 0.019 14.6 0.1 1.3 1 0 0 1 1 1 0 SAICAR synthetase Sec61_beta PF03911.16 ORF31435 - 0.34 11.0 4.0 9 6.4 0.1 3.2 3 0 0 3 3 3 0 Sec61beta family DUF2431 PF10354.9 ORF21630 - 9.5e-21 74.8 0.0 1.6e-20 74.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Drc1-Sld2 PF11719.8 ORF21630 - 0.26 10.8 2.4 0.39 10.2 2.4 1.2 1 0 0 1 1 1 0 DNA replication and checkpoint protein DUF2431 PF10354.9 ORF15779 - 9.5e-21 74.8 0.0 1.6e-20 74.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Drc1-Sld2 PF11719.8 ORF15779 - 0.26 10.8 2.4 0.39 10.2 2.4 1.2 1 0 0 1 1 1 0 DNA replication and checkpoint protein AMP-binding PF00501.28 ORF15535 - 7.7e-55 186.2 0.0 1e-54 185.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF15535 - 2.3e-07 31.7 0.1 7.5e-07 30.0 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 ORF15535 - 0.0038 16.1 0.0 0.047 12.6 0.0 2.1 2 0 0 2 2 2 1 GH3 auxin-responsive promoter Chloroa_b-bind PF00504.21 ORF151185 - 1.1e-84 282.8 0.2 8.1e-33 114.2 0.0 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein ubiquitin PF00240.23 ORF147602 - 8.2e-29 99.2 0.3 8.2e-29 99.2 0.3 1.9 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF147602 - 1.9e-14 53.2 0.4 5.6e-14 51.7 0.4 1.9 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF147602 - 0.0027 18.1 0.1 0.011 16.1 0.1 2.2 1 0 0 1 1 1 1 Ubiquitin-like domain DUF4139 PF13598.6 ORF147602 - 0.0094 15.7 0.0 0.024 14.4 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4139) TBK1_ULD PF18396.1 ORF147602 - 0.04 13.8 0.1 0.12 12.3 0.1 1.8 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain DUF948 PF06103.11 ORF147602 - 3.2 8.1 7.6 49 4.3 0.1 3.4 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) ABC_membrane_2 PF06472.15 ORF135075 - 1.2e-46 159.3 4.6 1.9e-46 158.7 4.6 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 ABC_tran PF00005.27 ORF135075 - 1.2e-15 58.3 0.0 1.5e-13 51.5 0.0 2.8 2 1 0 2 2 2 1 ABC transporter SbmA_BacA PF05992.12 ORF135075 - 4.2e-13 49.4 3.9 8.8e-13 48.4 3.9 1.5 1 1 0 1 1 1 1 SbmA/BacA-like family ABC_membrane PF00664.23 ORF135075 - 7e-06 25.9 5.6 9.4e-06 25.5 5.6 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region NACHT PF05729.12 ORF135075 - 0.0032 17.4 0.0 0.0077 16.2 0.0 1.6 1 0 0 1 1 1 1 NACHT domain AAA_16 PF13191.6 ORF135075 - 0.0045 17.4 0.2 0.0097 16.3 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF135075 - 0.0059 16.4 0.0 0.21 11.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 ORF135075 - 0.01 15.7 0.2 0.022 14.6 0.2 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 ORF135075 - 0.017 14.8 0.3 0.041 13.6 0.3 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_21 PF13304.6 ORF135075 - 0.029 14.2 0.1 0.069 12.9 0.1 1.6 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF135075 - 0.05 13.0 0.0 0.25 10.7 0.0 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain SASA PF03629.18 ORF135075 - 0.067 12.8 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 Carbohydrate esterase, sialic acid-specific acetylesterase MMR_HSR1 PF01926.23 ORF135075 - 0.093 12.8 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_25 PF13481.6 ORF135075 - 0.14 11.7 0.1 16 5.0 0.0 2.6 3 0 0 3 3 3 0 AAA domain AMP-binding PF00501.28 ORF134687 - 7.7e-55 186.2 0.0 1e-54 185.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF134687 - 2.3e-07 31.7 0.1 7.5e-07 30.0 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 ORF134687 - 0.0038 16.1 0.0 0.047 12.6 0.0 2.1 2 0 0 2 2 2 1 GH3 auxin-responsive promoter LBP_BPI_CETP_C PF02886.17 ORF104952 - 1.7e-05 24.4 0.0 3.8e-05 23.2 0.0 1.6 1 0 0 1 1 1 1 LBP / BPI / CETP family, C-terminal domain DUF4828 PF16110.5 ORF104952 - 0.11 12.9 3.3 10 6.7 0.2 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4828) IBR PF01485.21 ORF98636 - 3.3e-18 65.6 38.2 9.4e-11 41.8 6.4 3.6 3 0 0 3 3 3 3 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF98636 - 5.8e-07 29.7 5.6 5.8e-07 29.7 5.6 3.7 3 2 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF98636 - 0.00016 21.3 5.0 0.00055 19.6 5.0 2.0 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF98636 - 0.00099 19.1 6.2 0.00099 19.1 6.2 2.9 2 1 0 2 2 2 1 RING-type zinc-finger IBR PF01485.21 ORF9238 - 3.3e-18 65.6 38.2 9.4e-11 41.8 6.4 3.6 3 0 0 3 3 3 3 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF9238 - 5.8e-07 29.7 5.6 5.8e-07 29.7 5.6 3.7 3 2 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF9238 - 0.00016 21.3 5.0 0.00055 19.6 5.0 2.0 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF9238 - 0.00099 19.1 6.2 0.00099 19.1 6.2 2.9 2 1 0 2 2 2 1 RING-type zinc-finger AKNA PF12443.8 ORF84133 - 0.2 12.3 0.2 0.2 12.3 0.2 3.9 4 1 1 5 5 5 0 AT-hook-containing transcription factor Spc7 PF08317.11 ORF84133 - 0.49 9.2 43.4 0.016 14.1 21.2 3.6 2 1 1 3 3 3 0 Spc7 kinetochore protein Laminin_II PF06009.12 ORF84133 - 4 7.5 30.3 4.9 7.2 0.7 4.6 2 1 1 3 3 3 0 Laminin Domain II Gon7 PF08738.10 ORF84133 - 7 6.8 17.5 0.076 13.1 0.5 3.6 3 1 1 4 4 4 0 Gon7 family DUF883 PF05957.13 ORF84133 - 9.7 6.9 7.2 15 6.3 0.8 3.7 2 1 1 4 4 4 0 Bacterial protein of unknown function (DUF883) RINGv PF12906.7 ORF79247 - 1.7e-14 53.6 5.1 4e-14 52.5 5.1 1.7 1 0 0 1 1 1 1 RING-variant domain FHA PF00498.26 ORF79247 - 8.4e-07 29.3 0.2 2.1e-06 28.0 0.2 1.7 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF79247 - 7.3e-05 23.0 0.0 0.0002 21.6 0.0 1.7 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 ORF79247 - 0.0056 16.8 5.4 0.012 15.7 5.4 1.6 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF79247 - 0.012 15.9 4.5 0.059 13.7 4.6 2.1 1 1 1 2 2 2 0 Ring finger domain zf-DBF PF07535.12 ORF79247 - 1 9.5 4.1 0.49 10.5 0.4 2.5 2 0 0 2 2 2 0 DBF zinc finger Macoilin PF09726.9 ORF79247 - 6.7 5.1 14.5 9.6 4.6 14.5 1.2 1 0 0 1 1 1 0 Macoilin family FHA PF00498.26 ORF7294 - 2.4e-14 53.4 0.0 4.6e-14 52.5 0.0 1.5 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF7294 - 6.5e-09 36.0 0.2 6.5e-08 32.8 0.0 2.3 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain WW PF00397.26 ORF7294 - 3.6e-05 23.7 2.1 7.5e-05 22.7 2.1 1.6 1 0 0 1 1 1 1 WW domain DUF4976 PF16347.5 ORF147796 - 0.021 15.1 0.3 0.09 13.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4976) tRNA-synt_1c PF00749.21 ORF135108 - 1.7e-62 211.1 0.0 2.4e-62 210.6 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 ORF135108 - 8.3e-32 110.4 0.0 1.4e-31 109.8 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1c PF00749.21 ORF133724 - 1.7e-62 211.1 0.0 2.4e-62 210.6 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 ORF133724 - 8.3e-32 110.4 0.0 1.4e-31 109.8 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain Anoctamin PF04547.12 ORF12672 - 2.1e-53 181.8 18.5 2.6e-53 181.5 18.5 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel Pkinase PF00069.25 ORF120642 - 5.8e-56 189.8 0.0 7.7e-56 189.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF120642 - 2e-24 86.3 0.1 2.7e-24 85.8 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF120642 - 5.6e-14 52.3 0.1 4.1e-08 33.6 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF120642 - 5.8e-11 41.1 0.3 0.012 15.1 0.0 4.4 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF120642 - 2.4e-10 39.5 0.1 0.0031 17.3 0.0 4.4 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF120642 - 7.7e-10 38.5 0.4 0.00016 21.4 0.0 3.8 1 1 2 3 3 3 3 EF-hand domain pair Pkinase_fungal PF17667.1 ORF120642 - 0.00034 19.5 0.0 0.0011 17.9 0.0 1.7 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF120642 - 0.011 15.7 0.1 0.023 14.6 0.1 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF120642 - 0.017 14.5 0.2 0.031 13.6 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF120642 - 0.089 12.4 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 YrbL-PhoP_reg PF10707.9 ORF120642 - 0.17 11.4 0.0 0.28 10.7 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Asp PF00026.23 ORF81501 - 5.3e-07 29.4 0.5 0.0002 20.9 0.5 3.5 1 1 0 1 1 1 1 Eukaryotic aspartyl protease Ammonium_transp PF00909.21 ORF46563 - 2.1e-109 365.8 28.7 2.6e-109 365.5 28.7 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF3138 PF11336.8 ORF46563 - 0.033 12.8 3.3 0.051 12.2 3.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Trp_oprn_chp PF09534.10 ORF46563 - 0.045 13.5 2.2 0.29 10.9 2.0 2.4 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Vir_act_alpha_C PF10400.9 ORF46563 - 0.065 13.9 0.1 0.11 13.1 0.1 1.3 1 0 0 1 1 1 0 Virulence activator alpha C-term G_glu_transpept PF01019.21 ORF46074 - 2.5e-192 640.2 0.7 2.8e-192 640.0 0.7 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase VBS PF08913.10 ORF46074 - 0.092 13.2 0.4 1.1 9.8 0.0 2.3 2 0 0 2 2 2 0 Vinculin Binding Site YidC_periplas PF14849.6 ORF12203 - 1.2e-88 297.7 0.7 1.7e-88 297.2 0.7 1.2 1 0 0 1 1 1 1 YidC periplasmic domain 60KD_IMP PF02096.20 ORF12203 - 8.2e-61 204.7 15.4 1.5e-60 203.9 15.4 1.4 1 0 0 1 1 1 1 60Kd inner membrane protein DUF3290 PF11694.8 ORF12203 - 0.026 14.5 0.0 0.073 13.0 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) TrbC PF04956.13 ORF12203 - 1.5 9.1 4.8 1.3 9.3 0.3 2.8 3 0 0 3 3 3 0 TrbC/VIRB2 family DUF2427 PF10348.9 ORF12203 - 2.9 7.7 6.3 0.23 11.3 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2427) UDPGP PF01704.18 ORF92852 - 3e-15 55.8 0.0 4.6e-15 55.2 0.0 1.3 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase SIT PF15330.6 ORF69687 - 0.01 16.3 0.4 2.9 8.4 0.0 3.2 3 0 0 3 3 3 1 SHP2-interacting transmembrane adaptor protein, SIT PDDEXK_9 PF08011.11 ORF69687 - 0.042 13.8 0.9 0.21 11.5 0.9 2.3 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily TMEM154 PF15102.6 ORF69687 - 0.064 13.2 0.0 0.21 11.5 0.0 1.9 2 0 0 2 2 2 0 TMEM154 protein family SIT PF15330.6 ORF32152 - 0.01 16.3 0.4 2.9 8.4 0.0 3.2 3 0 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT PDDEXK_9 PF08011.11 ORF32152 - 0.042 13.8 0.9 0.21 11.5 0.9 2.3 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily TMEM154 PF15102.6 ORF32152 - 0.064 13.2 0.0 0.21 11.5 0.0 1.9 2 0 0 2 2 2 0 TMEM154 protein family Ion_trans PF00520.31 ORF20100 - 0.99 8.6 17.3 8.5 5.5 17.5 2.5 1 1 0 1 1 1 0 Ion transport protein Arm PF00514.23 ORF118478 - 0.0065 16.5 0.3 4 7.6 0.0 4.3 4 1 0 4 4 4 1 Armadillo/beta-catenin-like repeat WAPL PF07814.13 ORF118478 - 0.023 13.5 0.2 0.067 12.0 0.1 1.7 1 1 1 2 2 2 0 Wings apart-like protein regulation of heterochromatin Arm_2 PF04826.13 ORF118478 - 0.057 12.9 0.9 5.3 6.4 0.2 3.2 1 1 2 3 3 3 0 Armadillo-like NADHdh-2_N PF12155.8 ORF118478 - 0.089 13.2 2.0 2.6 8.5 0.4 2.6 2 0 0 2 2 2 0 NADH dehydrogenase subunit 2 N-terminal Phosphonate-bd PF12974.7 ORF79354 - 9.8e-71 238.2 0.0 1.6e-70 237.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein ABC_tran PF00005.27 ORF79354 - 7.2e-31 107.5 0.4 2.2e-30 106.0 0.0 2.0 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF79354 - 1.8e-06 28.0 0.2 0.025 14.4 0.2 2.4 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SBP_bac_3 PF00497.20 ORF79354 - 0.0021 17.5 0.6 0.02 14.3 0.6 2.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 AAA_29 PF13555.6 ORF79354 - 0.0045 16.7 0.9 0.011 15.5 0.9 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF79354 - 0.0049 17.3 3.0 0.0061 16.9 0.8 2.4 2 1 0 2 2 1 1 AAA ATPase domain AAA_23 PF13476.6 ORF79354 - 0.0071 16.9 2.6 0.015 15.8 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF79354 - 0.01 15.8 0.1 0.03 14.3 0.1 1.9 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) MMR_HSR1 PF01926.23 ORF79354 - 0.013 15.6 0.1 0.12 12.4 0.0 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase NACHT PF05729.12 ORF79354 - 0.014 15.3 0.0 0.033 14.1 0.0 1.6 1 0 0 1 1 1 0 NACHT domain SMC_N PF02463.19 ORF79354 - 0.018 14.5 0.2 1.5 8.2 0.0 2.3 1 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_18 PF13238.6 ORF79354 - 0.019 15.5 0.0 0.059 13.9 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 ORF79354 - 0.021 15.0 0.3 0.1 12.7 0.0 2.3 2 1 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 ORF79354 - 0.029 14.3 0.7 0.068 13.1 0.2 2.0 2 0 0 2 2 1 0 RsgA GTPase G-alpha PF00503.20 ORF79354 - 0.037 13.2 0.2 0.31 10.1 0.2 2.3 1 1 0 1 1 1 0 G-protein alpha subunit AAA_22 PF13401.6 ORF79354 - 0.045 14.0 0.6 0.27 11.5 0.6 2.4 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF79354 - 0.055 13.7 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 ORF79354 - 0.058 13.1 0.0 0.25 11.1 0.0 2.1 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family PEPCK_ATP PF01293.20 ORF79354 - 0.063 11.9 0.0 1.4 7.5 0.0 2.1 2 0 0 2 2 2 0 Phosphoenolpyruvate carboxykinase NTPase_1 PF03266.15 ORF79354 - 0.071 13.0 0.1 4.1 7.3 0.0 2.5 2 0 0 2 2 2 0 NTPase SbcCD_C PF13558.6 ORF79354 - 0.077 13.2 0.1 0.31 11.3 0.1 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Ion_trans PF00520.31 ORF2063 - 3.4e-29 101.8 29.0 5.5e-20 71.6 12.5 2.1 2 0 0 2 2 2 2 Ion transport protein Ribosomal_L1 PF00687.21 ORF2063 - 0.13 12.0 0.2 0.21 11.3 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L1p/L10e family Popeye PF04831.13 ORF2063 - 7.4 6.7 7.3 21 5.3 1.2 3.2 3 1 0 3 3 3 0 Popeye protein conserved region bZIP_1 PF00170.21 ORF136903 - 7e-07 29.2 12.6 7e-07 29.2 12.6 3.1 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF136903 - 2.5e-06 27.5 13.4 2.5e-06 27.5 13.4 2.8 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF136903 - 0.076 12.8 1.1 0.16 11.7 1.1 1.5 1 0 0 1 1 1 0 Peptidase M76 family SecD-TM1 PF13721.6 ORF136903 - 8.7 6.9 6.1 1.7 9.2 0.9 2.4 2 0 0 2 2 2 0 SecD export protein N-terminal TM region Amidohydro_1 PF01979.20 ORF79895 - 1.8e-16 60.4 1.0 2.8e-16 59.8 1.0 1.3 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF79895 - 5.2e-06 26.2 1.8 5.2e-05 22.9 0.0 2.6 3 0 0 3 3 3 1 Amidohydrolase family RabGAP-TBC PF00566.18 ORF39527 - 6.3e-52 176.3 3.7 1.6e-51 175.0 3.7 1.8 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF4064 PF13273.6 ORF35911 - 0.018 15.3 0.6 0.25 11.6 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) ERGIC_N PF13850.6 ORF35911 - 0.067 13.6 0.8 0.29 11.5 0.2 2.5 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Proho_convert PF12177.8 ORF35911 - 0.66 10.0 5.2 0.74 9.8 1.6 2.9 2 0 0 2 2 2 0 Prohormone convertase enzyme Disintegrin PF00200.23 ORF29032 - 5.8e-25 87.9 65.0 1.1e-14 54.9 28.4 6.5 5 2 0 5 5 5 2 Disintegrin Orthopox_F6 PF06601.12 ORF25414 - 0.062 13.5 0.9 0.3 11.3 0.2 2.5 1 1 1 2 2 2 0 Orthopoxvirus F6 protein Na_H_Exchanger PF00999.21 ORF90068 - 5.3e-53 180.2 44.6 6.6e-53 179.9 44.6 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF4134 PF13572.6 ORF70999 - 0.018 15.3 1.2 0.044 14.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4134) DPM2 PF07297.12 ORF70999 - 0.027 14.8 1.7 0.027 14.8 1.7 3.4 3 1 1 4 4 4 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Neur_chan_memb PF02932.16 ORF70999 - 0.049 13.7 0.3 0.049 13.7 0.3 2.6 3 1 1 4 4 4 0 Neurotransmitter-gated ion-channel transmembrane region UPF0242 PF06785.11 ORF70999 - 0.1 12.7 0.8 5.1 7.1 0.0 2.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF1218 PF06749.12 ORF70999 - 0.35 11.4 0.0 0.35 11.4 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1218) Spo7 PF03907.13 ORF70999 - 0.96 8.9 6.8 2.4 7.6 3.0 2.6 2 0 0 2 2 2 0 Spo7-like protein EphA2_TM PF14575.6 ORF70999 - 1.9 9.4 0.0 1.9 9.4 0.0 3.6 4 1 0 4 4 4 0 Ephrin type-A receptor 2 transmembrane domain EF-hand_1 PF00036.32 ORF60576 - 2.7e-13 48.4 4.4 5.2e-07 28.8 1.5 2.8 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF60576 - 2.6e-07 29.9 3.0 8.8e-05 21.8 0.8 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF60576 - 2.8e-07 30.3 0.8 0.00021 21.1 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF60576 - 4.9e-07 30.1 2.1 4.9e-07 30.1 2.1 2.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF60576 - 2.6e-06 26.9 11.8 6.5e-05 22.6 0.9 3.2 3 0 0 3 3 3 2 EF-hand domain DUF1359 PF07097.11 ORF60576 - 0.0039 17.4 2.0 2.1 8.6 0.1 3.1 3 0 0 3 3 3 2 Protein of unknown function (DUF1359) EF-hand_4 PF12763.7 ORF60576 - 0.21 11.6 5.0 0.59 10.1 0.0 3.1 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand Pkinase PF00069.25 ORF41108 - 7.9e-73 245.1 0.1 7.9e-73 245.1 0.1 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41108 - 3.4e-37 128.2 0.0 5.8e-37 127.4 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF41108 - 2e-10 41.0 4.6 3e-06 27.6 1.7 3.0 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF41108 - 2.4e-09 36.3 4.1 0.0011 18.7 0.2 3.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF41108 - 4.8e-08 32.0 4.5 0.00055 19.3 0.1 4.2 4 0 0 4 4 4 2 EF hand Choline_kinase PF01633.20 ORF41108 - 2.1e-06 27.5 0.2 2.1e-06 27.5 0.2 2.7 3 1 0 3 3 3 1 Choline/ethanolamine kinase Kdo PF06293.14 ORF41108 - 1.3e-05 24.7 0.0 2.9e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF41108 - 3.6e-05 23.2 0.3 0.0005 19.5 0.0 2.6 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF41108 - 0.00013 20.9 0.1 0.00028 19.8 0.0 1.7 2 0 0 2 2 2 1 Fungal protein kinase EF-hand_5 PF13202.6 ORF41108 - 0.00029 20.2 0.6 0.003 17.0 0.1 2.7 2 0 0 2 2 2 1 EF hand APH PF01636.23 ORF41108 - 0.0004 20.4 0.0 0.0019 18.2 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family EF-hand_9 PF14658.6 ORF41108 - 0.00042 20.6 0.3 0.33 11.3 0.0 2.9 2 0 0 2 2 2 1 EF-hand domain FTA2 PF13095.6 ORF41108 - 0.0074 15.9 0.1 0.026 14.2 0.1 2.0 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 ORF41108 - 0.014 15.0 0.0 0.014 15.0 0.0 2.6 3 0 0 3 3 3 0 RIO1 family FtsH_ext PF06480.15 ORF41108 - 0.018 15.4 5.3 2.3 8.6 0.5 3.2 2 1 0 3 3 3 0 FtsH Extracellular Dockerin_1 PF00404.18 ORF41108 - 0.23 11.7 7.5 3.6 7.9 0.0 4.0 4 0 0 4 4 4 0 Dockerin type I domain HECT PF00632.25 ORF36434 - 9.7e-68 228.9 0.0 1.8e-67 228.0 0.0 1.3 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Ank_4 PF13637.6 ORF36434 - 2.1e-12 47.3 2.0 0.0093 16.5 0.1 4.6 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF36434 - 7.6e-12 45.1 2.0 0.003 17.9 0.0 4.6 4 0 0 4 4 4 4 Ankyrin repeat Ank_2 PF12796.7 ORF36434 - 1.3e-07 32.1 1.3 0.00067 20.2 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF36434 - 1.1e-06 28.8 0.4 0.002 18.4 0.1 3.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF36434 - 0.00023 21.4 0.9 5.4 7.9 0.0 4.5 4 0 0 4 4 4 1 Ankyrin repeat DUF2509 PF10713.9 ORF36434 - 0.031 14.4 0.0 0.077 13.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2509) Cation_ATPase_C PF00689.21 ORF24283 - 2.5e-40 138.1 1.1 2.5e-40 138.1 1.1 1.4 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF24283 - 4.8e-13 49.9 0.5 4.3e-12 46.8 0.5 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF24283 - 1.1e-07 31.8 0.1 2.3e-07 30.8 0.1 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 ORF24283 - 0.0051 16.6 1.4 0.044 13.5 0.3 2.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase PhoLip_ATPase_C PF16212.5 ORF24283 - 0.13 12.0 7.1 0.21 11.3 1.3 2.3 2 0 0 2 2 2 0 Phospholipid-translocating P-type ATPase C-terminal DUF4134 PF13572.6 ORF104042 - 0.018 15.3 1.2 0.044 14.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4134) DPM2 PF07297.12 ORF104042 - 0.027 14.8 1.7 0.027 14.8 1.7 3.4 3 1 1 4 4 4 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Neur_chan_memb PF02932.16 ORF104042 - 0.049 13.7 0.3 0.049 13.7 0.3 2.6 3 1 1 4 4 4 0 Neurotransmitter-gated ion-channel transmembrane region UPF0242 PF06785.11 ORF104042 - 0.1 12.7 0.8 5.1 7.1 0.0 2.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF1218 PF06749.12 ORF104042 - 0.35 11.4 0.0 0.35 11.4 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1218) Spo7 PF03907.13 ORF104042 - 0.96 8.9 6.8 2.4 7.6 3.0 2.6 2 0 0 2 2 2 0 Spo7-like protein EphA2_TM PF14575.6 ORF104042 - 1.9 9.4 0.0 1.9 9.4 0.0 3.6 4 1 0 4 4 4 0 Ephrin type-A receptor 2 transmembrane domain Pkinase PF00069.25 ORF9455 - 2.5e-63 213.9 1.0 1.2e-62 211.6 0.0 2.2 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9455 - 2.6e-43 148.2 0.2 5.5e-43 147.1 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF9455 - 4.4e-09 36.1 0.0 1e-08 34.9 0.0 1.7 1 0 0 1 1 1 1 Kinase-like ORF6N PF10543.9 ORF9455 - 0.88 9.8 5.3 0.56 10.4 0.1 2.9 3 0 0 3 3 3 0 ORF6N domain Aminotran_1_2 PF00155.21 ORF85020 - 5e-29 101.6 0.0 8.1e-29 100.9 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Zeta_toxin PF06414.12 ORF85020 - 4.4e-20 71.8 0.0 7.5e-20 71.0 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin ATPase_2 PF01637.18 ORF85020 - 0.028 14.3 0.1 0.085 12.8 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Aminotran_MocR PF12897.7 ORF85020 - 0.063 12.1 0.0 0.098 11.4 0.0 1.2 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase AAA_33 PF13671.6 ORF85020 - 0.13 12.4 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain CPT PF07931.12 ORF85020 - 0.15 11.9 0.0 0.62 9.9 0.0 1.9 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein RICTOR_V PF14668.6 ORF71599 - 2.2e-23 82.3 0.1 2.2e-23 82.3 0.1 3.0 4 0 0 4 4 4 1 Rapamycin-insensitive companion of mTOR, domain 5 RasGEF_N_2 PF14663.6 ORF71599 - 2.6e-12 47.1 1.0 7.1e-11 42.5 0.1 2.6 2 0 0 2 2 2 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain zf-rbx1 PF12678.7 ORF58105 - 4e-06 27.0 4.6 9.5e-06 25.8 4.6 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF58105 - 5.2e-06 26.7 3.4 5.2e-06 26.7 3.4 2.0 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF58105 - 0.0001 22.1 4.3 0.0001 22.1 4.3 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF58105 - 0.00024 21.0 6.2 0.00024 21.0 6.2 2.2 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF58105 - 0.017 14.9 1.7 0.017 14.9 1.7 2.1 2 0 0 2 2 2 0 RING-like zinc finger Rad50_zn_hook PF04423.14 ORF58105 - 0.13 12.2 1.2 0.26 11.2 0.2 2.0 2 0 0 2 2 2 0 Rad50 zinc hook motif BIR PF00653.21 ORF58105 - 0.64 10.7 5.2 0.56 10.9 0.4 2.9 3 0 0 3 3 3 0 Inhibitor of Apoptosis domain Prok-RING_4 PF14447.6 ORF58105 - 4.3 7.3 9.5 0.16 11.9 2.5 2.2 3 0 0 3 3 3 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF58105 - 6.2 6.8 17.4 0.23 11.4 9.8 2.5 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) zf-C3H2C3 PF17122.5 ORF58105 - 6.5 6.9 7.8 12 6.0 4.8 2.7 2 0 0 2 2 2 0 Zinc-finger Zn_ribbon_17 PF17120.5 ORF58105 - 7.1 6.3 8.4 0.13 11.9 0.7 2.1 3 0 0 3 3 3 0 Zinc-ribbon, C4HC2 type Zn-ribbon_8 PF09723.10 ORF58105 - 8.4 6.6 10.4 0.12 12.5 2.6 2.0 2 0 0 2 2 1 0 Zinc ribbon domain zf-C3HC4_3 PF13920.6 ORF58105 - 8.8 6.3 13.4 0.11 12.4 3.5 2.7 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks14.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks14.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks14.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks14.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:04:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1712 PF08217.11 ORF85827 - 0.11 11.0 0.1 0.11 10.9 0.1 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1712) Ion_trans PF00520.31 ORF85768 - 0.0027 17.0 3.3 0.0038 16.5 3.3 1.1 1 0 0 1 1 1 1 Ion transport protein AP4E_app_platf PF14807.6 ORF80019 - 0.085 13.2 0.0 0.3 11.5 0.0 1.7 2 0 0 2 2 2 0 Adaptin AP4 complex epsilon appendage platform DUF2298 PF10060.9 ORF79411 - 0.0014 17.4 3.4 0.0016 17.3 3.4 1.1 1 0 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) HlyIII PF03006.20 ORF79411 - 0.044 13.5 3.3 0.12 12.0 3.3 1.6 1 1 0 1 1 1 0 Haemolysin-III related DUF2085 PF09858.9 ORF79411 - 0.14 12.7 2.1 0.26 11.8 1.5 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2085) UPF0016 PF01169.19 ORF79411 - 2.2 8.7 10.6 0.32 11.4 4.1 2.5 1 1 2 3 3 3 0 Uncharacterized protein family UPF0016 DUF998 PF06197.13 ORF79411 - 2.7 7.6 14.2 6.5 6.3 14.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF998) DUF2922 PF11148.8 ORF75896 - 0.014 15.1 1.9 0.86 9.4 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2922) SusF_SusE PF16411.5 ORF75896 - 0.34 11.4 1.7 0.41 11.2 0.6 1.5 1 1 0 2 2 2 0 Outer membrane protein SusF_SusE Ribosomal_S20p PF01649.18 ORF75896 - 1.1 10.0 6.7 5.2 7.8 2.1 2.3 1 1 1 2 2 2 0 Ribosomal protein S20 TMEM154 PF15102.6 ORF73460 - 0.0017 18.2 0.7 0.0036 17.2 0.7 1.6 1 1 0 1 1 1 1 TMEM154 protein family DUF5305 PF17231.2 ORF73460 - 0.0032 16.9 1.0 0.004 16.6 0.8 1.3 1 1 0 1 1 1 1 Family of unknown function (DUF5305) DUF4834 PF16118.5 ORF73460 - 0.0045 17.9 3.7 0.014 16.3 0.1 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4834) TMEM51 PF15345.6 ORF73460 - 0.011 15.6 0.2 0.014 15.3 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 LRR19-TM PF15176.6 ORF73460 - 0.019 14.9 0.4 0.06 13.3 0.0 1.8 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain Vpu PF00558.19 ORF73460 - 0.056 13.2 0.0 0.09 12.6 0.0 1.4 1 0 0 1 1 1 0 Vpu protein ISK_Channel PF02060.15 ORF73460 - 0.085 12.6 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Slow voltage-gated potassium channel MAP17 PF15807.5 ORF73460 - 0.21 11.8 1.1 0.31 11.3 0.4 1.7 1 1 1 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF4133 PF13571.6 ORF73460 - 0.3 11.4 1.8 0.41 11.0 0.9 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4133) Orf78 PF06024.12 ORF73460 - 0.5 10.7 0.1 0.5 10.7 0.1 2.0 1 1 1 2 2 2 0 Orf78 (ac78) Sugar_tr PF00083.24 ORF71495 - 1.7e-11 43.7 4.2 2.4e-11 43.2 4.2 1.2 1 1 0 1 1 1 1 Sugar (and other) transporter SoxZ PF08770.11 ORF71495 - 0.14 11.9 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Sulphur oxidation protein SoxZ DUF3589 PF12141.8 ORF69383 - 0.009 14.6 2.3 0.0095 14.6 2.3 1.1 1 0 0 1 1 1 1 Beta-mannosyltransferases TMEM132D_C PF15706.5 ORF69217 - 9.4e-05 22.1 0.2 0.0002 21.0 0.1 1.5 1 1 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF5305 PF17231.2 ORF69217 - 0.00093 18.7 1.3 0.0014 18.1 0.5 1.6 1 1 0 1 1 1 1 Family of unknown function (DUF5305) DUF4500 PF14937.6 ORF69217 - 0.0026 17.7 0.0 0.0054 16.7 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4500) TMEM171 PF15471.6 ORF69217 - 0.006 15.6 0.0 0.0077 15.3 0.0 1.1 1 0 0 1 1 1 1 Transmembrane protein family 171 ABC2_membrane_3 PF12698.7 ORF69217 - 0.0066 15.6 0.4 0.0089 15.2 0.4 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein DUF4834 PF16118.5 ORF69217 - 0.0082 17.1 0.3 0.034 15.1 0.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4834) SKN1 PF03935.15 ORF69217 - 0.0098 14.3 0.0 0.013 14.0 0.0 1.1 1 0 0 1 1 1 1 Beta-glucan synthesis-associated protein (SKN1) FAM176 PF14851.6 ORF69217 - 0.014 15.1 0.5 0.014 15.1 0.5 1.7 1 1 1 2 2 2 0 FAM176 family TMEM144 PF07857.12 ORF69217 - 0.022 13.7 0.0 0.032 13.2 0.0 1.2 1 0 0 1 1 1 0 Transmembrane family, TMEM144 of transporters EphA2_TM PF14575.6 ORF69217 - 0.026 15.4 0.0 0.049 14.5 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain SID-1_RNA_chan PF13965.6 ORF69217 - 0.042 12.3 0.2 0.042 12.3 0.2 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 TarH PF02203.15 ORF69217 - 0.047 13.6 0.4 0.083 12.8 0.0 1.5 2 0 0 2 2 2 0 Tar ligand binding domain homologue MAP17 PF15807.5 ORF69217 - 0.066 13.4 0.5 0.096 12.9 0.3 1.4 1 1 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 LRR19-TM PF15176.6 ORF69217 - 0.068 13.2 0.6 0.15 12.1 0.1 1.7 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain Acatn PF13000.7 ORF69217 - 0.096 11.2 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 Acetyl-coenzyme A transporter 1 DUF4133 PF13571.6 ORF69217 - 0.17 12.3 2.0 0.25 11.7 0.7 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4133) Skp1_POZ PF03931.15 ORF67437 - 0.0032 17.6 0.0 0.011 15.8 0.0 1.8 2 0 0 2 2 2 1 Skp1 family, tetramerisation domain TetR_C_8 PF14278.6 ORF67437 - 0.097 12.8 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator C-terminal region He_PIG PF05345.12 ORF65938 - 0.025 14.8 0.0 0.05 13.8 0.0 1.6 1 1 0 1 1 1 0 Putative Ig domain NARP1 PF12569.8 ORF64550 - 2.4 7.0 7.2 3.2 6.6 7.2 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 ThiG PF05690.14 ORF6438 - 1.4e-60 204.6 4.3 1.7e-60 204.4 4.3 1.0 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 ORF6438 - 2.5e-05 23.9 0.1 3.7e-05 23.3 0.1 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.25 ORF6438 - 0.0021 17.1 1.6 0.0026 16.8 1.6 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 ORF6438 - 0.003 16.7 0.5 0.0042 16.2 0.5 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NanE PF04131.14 ORF6438 - 0.0032 16.7 0.2 0.0045 16.2 0.2 1.3 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase NMO PF03060.15 ORF6438 - 0.074 12.4 2.0 0.088 12.2 2.0 1.1 1 0 0 1 1 1 0 Nitronate monooxygenase MORN PF02493.20 ORF63878 - 4.9e-42 139.4 53.6 9.6e-08 31.5 1.4 8.0 8 0 0 8 8 8 7 MORN repeat ARS2 PF04959.13 ORF62500 - 2.6 8.4 6.8 0.39 11.1 1.0 1.9 1 1 1 2 2 2 0 Arsenite-resistance protein 2 FCD PF07729.12 ORF6112 - 7.4e-20 71.6 1.8 7.4e-20 71.6 1.8 1.4 2 0 0 2 2 2 1 FCD domain Metallothio_11 PF02066.15 ORF60888 - 0.092 12.9 1.3 0.092 12.9 1.3 3.0 3 0 0 3 3 3 0 Metallothionein family 11 Phage_ASH PF10554.9 ORF60888 - 1.8 9.0 8.7 0.49 10.8 0.8 2.2 1 1 1 2 2 2 0 Ash protein family Orthopox_F7 PF05813.12 ORF60623 - 9.2 6.5 7.8 19 5.4 4.9 2.8 1 1 2 3 3 3 0 Orthopoxvirus F7 protein CH PF00307.31 ORF60537 - 0.0052 16.9 1.2 0.0077 16.4 1.2 1.3 1 0 0 1 1 1 1 Calponin homology (CH) domain Skp1 PF01466.19 ORF58421 - 1.2e-23 83.0 1.5 2.6e-23 81.9 1.5 1.6 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF58421 - 1.2e-06 28.6 2.2 2.3e-06 27.7 2.2 1.5 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain IFT46_B_C PF12317.8 ORF58421 - 0.016 14.9 0.1 0.027 14.2 0.1 1.4 1 1 0 1 1 1 0 Intraflagellar transport complex B protein 46 C terminal Opy2 PF09463.10 ORF57775 - 7.7 6.9 8.9 0.71 10.2 3.9 1.9 2 0 0 2 2 2 0 Opy2 protein Phospholamban PF04272.14 ORF56498 - 0.049 13.1 0.7 0.14 11.6 0.7 1.8 1 0 0 1 1 1 0 Phospholamban Ank_2 PF12796.7 ORF55713 - 1.5e-05 25.5 0.1 3.6e-05 24.2 0.1 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF55713 - 0.00077 19.8 0.6 0.15 12.6 0.3 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF55713 - 0.0022 18.5 0.1 0.0095 16.5 0.1 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF55713 - 0.0048 17.3 0.1 0.27 11.9 0.0 2.6 2 0 0 2 2 2 1 Ankyrin repeat Phospholamban PF04272.14 ORF55612 - 0.049 13.1 0.7 0.14 11.6 0.7 1.8 1 0 0 1 1 1 0 Phospholamban Sigma_reg_C PF13791.6 ORF54895 - 0.013 15.7 0.4 0.017 15.3 0.4 1.2 1 0 0 1 1 1 0 Sigma factor regulator C-terminal Toxin_34 PF08396.10 ORF54101 - 2 9.3 7.7 6.3 7.6 0.5 2.4 2 1 0 2 2 2 0 Spider toxin omega agatoxin/Tx1 family Ras PF00071.22 ORF53149 - 2.8e-23 82.3 0.3 3.7e-23 81.9 0.3 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF53149 - 1.1e-06 28.8 0.2 3.9e-06 27.1 0.1 1.8 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase DP PF08781.10 ORF52573 - 0.031 14.2 0.1 0.049 13.5 0.1 1.4 1 0 0 1 1 1 0 Transcription factor DP Phage_NinH PF06322.11 ORF52573 - 0.063 13.2 0.2 0.14 12.0 0.2 1.6 1 0 0 1 1 1 0 Phage NinH protein Ras PF00071.22 ORF51852 - 4.1e-34 117.5 1.2 6e-34 117.0 1.2 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF51852 - 3.7e-15 56.2 0.4 3.7e-15 56.2 0.4 1.8 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF51852 - 3.3e-05 23.4 0.4 4.1e-05 23.1 0.4 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family AAA_12 PF13087.6 ORF51699 - 3.4e-10 39.9 0.1 4.6e-10 39.5 0.1 1.2 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 ORF51699 - 6.1e-05 22.8 0.0 0.00016 21.4 0.0 1.7 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain DAGK_cat PF00781.24 ORF51699 - 0.057 13.0 0.0 0.2 11.3 0.0 1.8 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain PARG_cat PF05028.14 ORF49733 - 0.016 14.5 0.6 0.021 14.1 0.6 1.1 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) Ribosom_S12_S23 PF00164.25 ORF46989 - 1.1e-42 144.2 1.0 1.5e-42 143.8 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S12 PF17487.2 ORF46989 - 0.032 15.0 0.2 0.39 11.5 0.0 2.2 2 1 0 2 2 2 0 Ribosomal protein S12 Sugar_tr PF00083.24 ORF46951 - 1.7e-11 43.7 4.2 2.4e-11 43.2 4.2 1.2 1 1 0 1 1 1 1 Sugar (and other) transporter SoxZ PF08770.11 ORF46951 - 0.14 11.9 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Sulphur oxidation protein SoxZ SWIM PF04434.17 ORF4695 - 1.2 8.9 5.3 1.9 8.2 0.5 2.7 2 0 0 2 2 2 0 SWIM zinc finger EptA_B_N PF08019.12 ORF46775 - 0.05 13.5 1.0 0.077 12.9 1.0 1.4 1 0 0 1 1 1 0 Phosphoethanolamine transferase EptA/EptB AAA_31 PF13614.6 ORF46020 - 0.98 9.3 3.7 1.2 9.0 3.2 1.4 1 1 0 1 1 1 0 AAA domain ParBc PF02195.18 ORF45978 - 0.012 15.9 0.0 0.019 15.3 0.0 1.4 1 0 0 1 1 1 0 ParB-like nuclease domain TAFH PF07531.14 ORF45978 - 0.19 11.8 0.0 0.43 10.7 0.0 1.5 1 0 0 1 1 1 0 NHR1 homology to TAF DUF3432 PF11914.8 ORF45081 - 0.45 10.8 6.1 0.98 9.7 1.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3432) DUF1794 PF08768.11 ORF44005 - 5.3e-15 55.6 0.0 6.3e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1794) SHIPPO-rpt PF07004.12 ORF42180 - 0.0024 18.7 0.4 0.0024 18.7 0.4 2.8 3 0 0 3 3 3 1 Sperm-tail PG-rich repeat YdjO PF14169.6 ORF40846 - 0.59 9.9 3.4 0.33 10.7 1.3 1.7 2 0 0 2 2 2 0 Cold-inducible protein YdjO NUDE_C PF04880.13 ORF4037 - 0.43 11.0 2.4 0.68 10.4 2.4 1.3 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region EF-hand_1 PF00036.32 ORF39956 - 1.4e-26 90.0 13.1 2.1e-06 26.9 0.2 4.9 4 1 1 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF39956 - 9.1e-23 80.5 4.3 1e-13 51.5 0.9 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF39956 - 4e-20 70.0 7.3 1.3e-05 24.7 0.1 4.7 4 1 1 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 ORF39956 - 4.4e-20 70.2 12.3 8.5e-05 21.9 0.2 5.2 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF39956 - 5.4e-10 39.0 10.5 2.2e-05 24.2 2.6 4.5 2 2 2 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF39956 - 1.3e-09 38.3 0.3 0.00023 21.4 0.1 2.5 2 2 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF39956 - 9.2e-05 22.3 5.6 0.046 13.7 0.8 3.6 1 1 2 3 3 3 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF39956 - 0.0047 17.2 0.1 0.081 13.3 0.1 2.7 2 1 1 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF39956 - 0.013 15.5 0.6 7 6.5 0.0 3.5 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF39956 - 0.018 15.2 4.4 8.4 6.7 4.1 3.1 2 1 0 2 2 2 0 Dockerin type I domain PMBR PF09373.10 ORF39956 - 0.048 13.8 0.0 4.4 7.6 0.0 3.4 4 0 0 4 4 4 0 Pseudomurein-binding repeat DUF2922 PF11148.8 ORF39240 - 0.014 15.1 1.9 0.86 9.4 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2922) SusF_SusE PF16411.5 ORF39240 - 0.34 11.4 1.7 0.41 11.2 0.6 1.5 1 1 0 2 2 2 0 Outer membrane protein SusF_SusE Ribosomal_S20p PF01649.18 ORF39240 - 1.1 10.0 6.7 5.2 7.8 2.1 2.3 1 1 1 2 2 2 0 Ribosomal protein S20 Kelch_3 PF13415.6 ORF37630 - 0.51 10.7 4.5 0.29 11.5 0.9 2.2 2 0 0 2 2 2 0 Galactose oxidase, central domain MORN PF02493.20 ORF37113 - 6.4e-10 38.3 28.6 0.00032 20.4 2.2 4.5 4 0 0 4 4 4 4 MORN repeat DUF3048_C PF17479.2 ORF37113 - 0.029 14.8 8.3 0.083 13.3 7.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain BT1 PF03092.16 ORF37031 - 2.2e-06 26.2 6.7 2.4e-06 26.1 6.7 1.2 1 0 0 1 1 1 1 BT1 family CCAP PF11105.8 ORF36304 - 0.27 11.2 2.0 0.47 10.4 2.0 1.3 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a Tyosinase_C PF18132.1 ORF35112 - 0.054 14.2 0.0 0.071 13.8 0.0 1.2 1 0 0 1 1 1 0 Tyosinase C-terminal domain ANAPC4_WD40 PF12894.7 ORF31106 - 0.011 16.0 0.0 0.033 14.5 0.0 1.7 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF31106 - 0.2 12.6 0.3 1.1 10.2 0.0 2.4 3 0 0 3 3 3 0 WD domain, G-beta repeat TrmO_C PF18389.1 ORF26690 - 0.019 15.0 0.1 0.04 14.0 0.1 1.6 1 0 0 1 1 1 0 TrmO C-terminal domain CCAP PF11105.8 ORF23746 - 0.27 11.2 2.0 0.47 10.4 2.0 1.3 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a PPR_2 PF13041.6 ORF22547 - 6.8e-08 32.6 0.2 7.2e-06 26.1 0.0 2.0 1 1 1 2 2 2 2 PPR repeat family PPR PF01535.20 ORF22547 - 0.0007 19.7 0.4 0.43 10.9 0.1 3.7 3 1 0 3 3 3 1 PPR repeat PPR_3 PF13812.6 ORF22547 - 0.028 14.5 0.0 0.049 13.7 0.0 1.4 1 0 0 1 1 1 0 Pentatricopeptide repeat domain OSK PF17182.4 ORF22547 - 0.23 10.7 0.0 0.27 10.4 0.0 1.1 1 0 0 1 1 1 0 OSK domain zf-RING_2 PF13639.6 ORF20993 - 8.9e-09 35.5 15.2 1.5e-08 34.8 15.2 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF20993 - 2.9e-05 23.9 12.1 4.8e-05 23.1 12.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF20993 - 0.002 18.1 7.1 0.002 18.1 7.1 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF20993 - 0.0074 16.6 15.7 0.027 14.8 15.7 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF20993 - 0.019 14.8 16.2 0.031 14.1 16.2 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF20993 - 0.026 14.6 14.1 0.056 13.6 14.1 1.6 1 0 0 1 1 1 0 RING-variant domain Zn_ribbon_17 PF17120.5 ORF20993 - 0.039 13.6 10.5 0.075 12.7 10.5 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF20993 - 0.067 13.3 12.1 0.16 12.0 9.6 2.5 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger KIX_2 PF16987.5 ORF20993 - 0.11 12.6 0.1 0.38 10.8 0.0 1.9 2 0 0 2 2 2 0 KIX domain zf-RING_11 PF17123.5 ORF20993 - 0.12 12.2 17.8 0.053 13.3 12.6 2.4 2 0 0 2 2 2 0 RING-like zinc finger FANCL_C PF11793.8 ORF20993 - 0.25 11.5 11.9 6.1 7.1 11.9 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_5 PF14634.6 ORF20993 - 0.44 10.5 13.5 0.79 9.7 13.5 1.4 1 0 0 1 1 1 0 zinc-RING finger domain zf-RING_4 PF14570.6 ORF20993 - 0.8 9.5 12.9 1.6 8.6 12.9 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Ank_2 PF12796.7 ORF20145 - 1.1e-10 42.0 0.0 1.9e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF20145 - 2.6e-10 40.3 0.3 6.1e-07 29.6 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF20145 - 5e-08 33.1 0.2 0.00022 21.5 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF20145 - 1e-07 31.6 0.1 0.031 14.8 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF20145 - 7.8e-07 29.5 0.0 0.00029 21.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) PSRT PF07636.11 ORF18924 - 0.11 12.2 10.7 0.23 11.1 1.9 2.8 2 1 1 3 3 3 0 PSRT DUF2922 PF11148.8 ORF16490 - 0.014 15.1 1.9 0.86 9.4 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2922) SusF_SusE PF16411.5 ORF16490 - 0.34 11.4 1.7 0.41 11.2 0.6 1.5 1 1 0 2 2 2 0 Outer membrane protein SusF_SusE Ribosomal_S20p PF01649.18 ORF16490 - 1.1 10.0 6.7 5.2 7.8 2.1 2.3 1 1 1 2 2 2 0 Ribosomal protein S20 PLAT PF01477.23 ORF152808 - 6.8e-07 29.9 0.0 8.2e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 PLAT/LH2 domain adh_short PF00106.25 ORF151305 - 1.2e-05 24.9 0.0 0.033 13.7 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF151305 - 0.028 14.0 0.0 0.036 13.6 0.0 1.4 1 1 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Metallothio_Euk PF12749.7 ORF150701 - 0.27 11.4 10.6 0.075 13.2 2.2 2.3 2 0 0 2 2 2 0 Eukaryotic metallothionein Alpha_E3_glycop PF01563.16 ORF144448 - 0.046 13.8 0.2 0.098 12.7 0.2 1.6 1 0 0 1 1 1 0 Alphavirus E3 glycoprotein DUF2207 PF09972.9 ORF144333 - 8.6 5.0 8.6 11 4.7 8.6 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ni_hydr_CYTB PF01292.20 ORF143200 - 0.0041 16.7 2.2 0.0064 16.1 1.3 1.8 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 Gaa1 PF04114.14 ORF143200 - 0.017 14.2 0.1 0.019 14.0 0.1 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component DUF1980 PF09323.10 ORF143200 - 2 8.3 5.9 0.34 10.8 2.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) Rrf2 PF02082.20 ORF142621 - 9.2e-17 61.2 0.2 1.7e-16 60.4 0.2 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_27 PF13463.6 ORF142621 - 0.00026 21.4 0.0 0.00075 19.9 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain TrmB PF01978.19 ORF142621 - 0.018 14.9 0.5 0.087 12.7 0.1 2.2 2 2 1 3 3 3 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 ORF142621 - 0.02 14.8 0.0 0.066 13.1 0.0 1.9 2 0 0 2 2 2 0 MarR family HTH_Crp_2 PF13545.6 ORF142621 - 0.055 13.4 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain GntR PF00392.21 ORF142621 - 0.056 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_36 PF13730.6 ORF142621 - 0.081 12.9 0.0 0.18 11.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain SgrR_N PF12793.7 ORF142621 - 0.096 12.9 0.0 0.26 11.5 0.0 1.7 2 0 0 2 2 2 0 Sugar transport-related sRNA regulator N-term KAP PF05804.12 ORF14153 - 2.7 6.0 4.0 3.5 5.6 4.0 1.1 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) Cyclin_N PF00134.23 ORF139775 - 6e-06 26.0 0.2 8e-06 25.6 0.2 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF139775 - 7.3e-06 26.4 0.7 9.5e-06 26.1 0.7 1.2 1 0 0 1 1 1 1 Cyclin RMP PF14996.6 ORF138388 - 0.14 12.3 1.6 0.34 11.1 1.6 1.6 1 0 0 1 1 1 0 Retinal Maintenance EF-hand_1 PF00036.32 ORF138051 - 4.2e-07 29.1 0.6 0.0057 16.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF138051 - 2.3e-06 27.9 0.6 4.2e-06 27.1 0.6 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF138051 - 6.2e-06 25.7 0.5 0.012 15.4 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF138051 - 0.0034 17.2 0.2 0.9 9.4 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair C6_DPF PF10170.9 ORF138051 - 0.023 15.1 1.8 0.045 14.1 1.8 1.5 1 0 0 1 1 1 0 Cysteine-rich domain EF-hand_4 PF12763.7 ORF138051 - 0.073 13.0 1.3 0.15 12.0 0.3 1.9 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand ubiquitin PF00240.23 ORF13733 - 4.3e-21 74.4 1.5 5.5e-14 51.7 0.0 2.7 2 1 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF13733 - 5.3e-10 39.0 4.9 5.3e-06 26.2 0.1 2.3 2 1 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF13733 - 3.4e-05 24.2 1.9 0.052 14.0 0.0 3.1 2 1 1 3 3 3 2 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF13733 - 0.00031 20.7 0.8 0.6 10.2 0.0 3.8 3 1 1 4 4 4 1 Ubiquitin-like domain SH3_1 PF00018.28 ORF13733 - 0.0012 18.5 1.8 0.017 14.7 0.1 2.6 3 0 0 3 3 3 1 SH3 domain SH3_9 PF14604.6 ORF13733 - 0.0019 18.0 0.0 0.0036 17.1 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain BPD_transp_1 PF00528.22 ORF134831 - 1.2e-15 57.8 6.3 1.5e-15 57.4 6.3 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Deltameth_res PF16020.5 ORF134831 - 1.2 9.1 3.5 0.45 10.4 0.6 1.8 2 0 0 2 2 2 0 Deltamethrin resistance DUF3432 PF11914.8 ORF133648 - 0.45 10.8 6.1 0.98 9.7 1.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3432) PARG_cat PF05028.14 ORF133612 - 0.057 12.7 1.7 0.063 12.6 1.7 1.1 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) DUF4029 PF13221.6 ORF133612 - 3 8.6 10.0 2.9 8.6 4.3 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4029) PARG_cat PF05028.14 ORF131786 - 0.03 13.6 1.6 0.033 13.5 1.6 1.1 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) DUF4029 PF13221.6 ORF131786 - 1.6 9.5 10.1 1.8 9.3 4.9 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4029) Mito_carr PF00153.27 ORF128731 - 4.7e-24 84.1 0.1 7.1e-11 41.9 0.1 2.1 1 1 1 2 2 2 2 Mitochondrial carrier protein Tail_VII PF17091.5 ORF127026 - 0.26 11.2 5.0 0.96 9.4 5.0 1.9 1 1 0 1 1 1 0 Inovirus G7P protein DUF3719 PF12516.8 ORF126242 - 0.13 12.0 0.1 0.31 10.8 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) KAP PF05804.12 ORF126160 - 2.7 6.0 4.0 3.5 5.6 4.0 1.1 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) EF-hand_1 PF00036.32 ORF126153 - 4.6e-32 107.2 16.5 2.8e-09 35.8 0.8 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF126153 - 1e-23 83.5 8.2 7.1e-13 48.8 2.6 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF126153 - 4e-23 79.3 13.1 3.7e-08 32.7 0.9 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF126153 - 2.7e-20 72.0 13.2 9e-06 25.4 0.5 4.1 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF126153 - 7e-20 69.6 12.7 6.3e-07 28.6 2.3 4.3 4 0 0 4 4 4 4 EF hand SPARC_Ca_bdg PF10591.9 ORF126153 - 1.2e-09 38.5 3.3 5.4e-05 23.5 0.5 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF126153 - 8.4e-06 25.7 6.6 0.0082 16.1 1.8 2.5 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF126153 - 0.014 15.7 0.4 0.26 11.6 0.2 2.8 2 1 1 3 3 3 0 EF-hand domain EF-hand_13 PF17958.1 ORF126153 - 0.017 14.9 0.0 0.13 12.1 0.0 2.3 1 1 2 3 3 3 0 EF-hand domain Caleosin PF05042.13 ORF126153 - 0.036 14.0 1.2 6.8 6.6 0.0 3.1 1 1 1 3 3 3 0 Caleosin related protein HTH_Tnp_IS630 PF01710.16 ORF126153 - 0.55 10.3 5.5 11 6.1 1.0 2.7 1 1 2 3 3 3 0 Transposase Dockerin_1 PF00404.18 ORF126153 - 0.56 10.4 11.0 1 9.6 1.3 3.8 1 1 3 4 4 4 0 Dockerin type I domain DUF2207 PF09972.9 ORF12603 - 8.6 5.0 8.6 11 4.7 8.6 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FNIP_C PF14638.6 ORF125816 - 0.15 11.7 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Folliculin-interacting protein C-terminus PRK PF00485.18 ORF125058 - 0.029 14.1 0.5 0.041 13.6 0.5 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family His_Phos_1 PF00300.22 ORF123224 - 7.7e-05 22.5 0.0 0.00044 20.0 0.0 1.8 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PIN_8 PF18476.1 ORF121948 - 0.1 12.4 10.0 0.13 12.1 10.0 1.1 1 0 0 1 1 1 0 PIN like domain Tyrosinase PF00264.20 ORF121948 - 0.17 12.1 0.8 0.19 12.0 0.8 1.2 1 0 0 1 1 1 0 Common central domain of tyrosinase CEL_III_C PF18054.1 ORF121948 - 0.31 11.1 6.4 0.53 10.4 6.2 1.5 1 1 0 1 1 1 0 CEL-III C-terminal Suf PF05843.14 ORF121948 - 1 9.3 10.8 1.3 9.0 10.8 1.2 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) Neur_chan_memb PF02932.16 ORF121948 - 3.7 7.5 8.6 4.4 7.3 8.6 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Apt1 PF10351.9 ORF121944 - 0.24 10.2 10.5 0.26 10.1 10.5 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain SOBP PF15279.6 ORF121944 - 5.3 7.6 12.3 5.9 7.4 12.3 1.1 1 0 0 1 1 1 0 Sine oculis-binding protein SSP160 PF06933.11 ORF121944 - 7.4 4.6 31.7 9.2 4.3 31.7 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 EutK_C PF16365.5 ORF120835 - 4.2e-35 119.6 1.2 4.2e-35 119.6 1.2 2.1 2 0 0 2 2 2 1 Ethanolamine utilization protein EutK C-terminus BMC PF00936.19 ORF120835 - 4.3e-21 74.7 2.4 9.6e-21 73.6 1.6 1.8 2 0 0 2 2 2 1 BMC domain HTH_IclR PF09339.10 ORF120835 - 0.0033 17.2 0.2 0.0078 16.0 0.2 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 ORF120835 - 0.0066 16.5 0.1 0.017 15.2 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain EAP30 PF04157.16 ORF120835 - 0.0081 15.5 0.0 0.0081 15.5 0.0 1.2 1 0 0 1 1 1 1 EAP30/Vps36 family FaeA PF04703.12 ORF120835 - 0.0083 16.5 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 FaeA-like protein TrmB PF01978.19 ORF120835 - 0.0086 15.9 0.0 0.02 14.7 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF3589 PF12141.8 ORF119808 - 0.009 14.6 2.3 0.0095 14.6 2.3 1.1 1 0 0 1 1 1 1 Beta-mannosyltransferases SP_C-Propep PF08999.10 ORF119187 - 0.042 13.6 5.5 0.11 12.3 5.5 1.7 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide UPF0258 PF06789.12 ORF119187 - 1.1 9.4 3.1 1.5 9.0 3.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0258) EptA_B_N PF08019.12 ORF117878 - 0.12 12.3 3.3 0.19 11.6 2.0 1.8 1 1 1 2 2 2 0 Phosphoethanolamine transferase EptA/EptB CH PF00307.31 ORF115740 - 0.0052 16.9 1.2 0.0077 16.4 1.2 1.3 1 0 0 1 1 1 1 Calponin homology (CH) domain ADIP PF11559.8 ORF114186 - 0.0021 18.2 4.1 0.0021 18.2 4.1 2.1 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding DMPK_coil PF08826.10 ORF114186 - 0.039 14.1 0.6 0.14 12.3 0.6 1.9 1 0 0 1 1 1 0 DMPK coiled coil domain like V_ATPase_I PF01496.19 ORF114186 - 0.23 9.3 5.6 0.28 9.0 5.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2854 PF11016.8 ORF114186 - 0.64 9.9 4.4 2.4 8.0 0.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2854) DivIC PF04977.15 ORF114186 - 5 7.0 11.3 0.76 9.6 0.8 3.3 2 1 1 3 3 3 0 Septum formation initiator Noc2 PF03715.13 ORF111425 - 2.4e-13 50.0 0.0 3.4e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Noc2p family Cwf_Cwc_15 PF04889.12 ORF111425 - 0.02 14.6 1.9 0.029 14.1 1.9 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein TPR_20 PF14561.6 ORF111425 - 0.096 13.0 0.2 0.096 13.0 0.2 1.6 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF5558 PF17713.1 ORF110631 - 0.013 15.8 0.6 0.018 15.4 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5558) Ribonucleas_3_3 PF14622.6 ORF110631 - 0.088 13.0 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Ribonuclease-III-like Zn_ribbon_SprT PF17283.2 ORF108231 - 9.1 6.3 11.1 7.1 6.6 6.3 2.8 2 1 0 2 2 2 0 SprT-like zinc ribbon domain GCD14_N PF14801.6 ORF106194 - 0.0039 17.0 0.0 0.0082 16.0 0.0 1.5 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit N-term eIF_4EBP PF05456.11 ORF103105 - 0.16 11.9 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) WHEP-TRS PF00458.20 ORF102509 - 0.021 15.0 0.9 0.039 14.1 0.9 1.3 1 0 0 1 1 1 0 WHEP-TRS domain MAP7 PF05672.11 ORF102509 - 0.036 13.8 11.0 0.048 13.4 11.0 1.1 1 0 0 1 1 1 0 MAP7 (E-MAP-115) family Sigma54_DBD PF04552.13 ORF102509 - 0.05 13.3 0.3 0.065 12.9 0.3 1.2 1 0 0 1 1 1 0 Sigma-54, DNA binding domain Iron_permease PF04120.12 ORF102509 - 0.14 12.0 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Low affinity iron permease Vfa1 PF08432.10 ORF102509 - 0.92 9.8 6.9 1.2 9.5 6.9 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF2207 PF09972.9 ORF101975 - 8.6 5.0 8.6 11 4.7 8.6 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Drc1-Sld2 PF11719.8 ORF10170 - 0.047 13.2 0.2 0.06 12.9 0.2 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein Cnd1 PF12717.7 ORF10170 - 0.09 12.8 0.2 0.13 12.3 0.2 1.3 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 Bac_transf PF02397.16 NODE_41547_length_493_cov_2.567686_g33984_i0forward_frame_1 - 5.6e-46 156.5 0.0 6.6e-46 156.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial sugar transferase DUF3418 PF11898.8 NODE_41546_length_493_cov_2.705240_g33983_i0reverse_frame_1 - 3.2e-49 168.1 0.7 3.7e-49 167.9 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) OB_NTP_bind PF07717.16 NODE_41546_length_493_cov_2.705240_g33983_i0reverse_frame_1 - 2.5e-14 53.4 0.0 4e-14 52.7 0.0 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold AXIN1_TNKS_BD PF16646.5 NODE_41542_length_493_cov_3.323144_g33979_i0reverse_frame_1 - 0.27 12.2 0.3 0.27 12.2 0.3 2.7 1 1 1 2 2 2 0 Axin-1 tankyrase binding domain Thioredoxin_9 PF14595.6 NODE_41540_length_493_cov_3.681223_g33977_i0forward_frame_1 - 0.1 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin DUF4050 PF13259.6 NODE_41524_length_493_cov_135.650655_g33961_i0forward_frame_1 - 0.44 10.9 5.9 0.61 10.4 5.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4050) YwiC PF14256.6 NODE_41523_length_493_cov_147.978166_g33960_i0reverse_frame_1 - 0.11 12.8 0.8 0.2 12.0 0.8 1.3 1 0 0 1 1 1 0 YwiC-like protein NapE PF06796.11 NODE_41509_length_493_cov_388.467249_g33947_i0forward_frame_1 - 6 6.5 6.9 0.42 10.2 1.6 1.8 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE Seryl_tRNA_N PF02403.22 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.0043 17.3 21.2 0.26 11.5 3.4 3.3 2 1 1 3 3 3 3 Seryl-tRNA synthetase N-terminal domain DUF5082 PF16888.5 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.022 15.0 25.7 0.17 12.2 5.5 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Unstab_antitox PF09720.10 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.031 14.3 2.7 0.48 10.5 0.2 3.1 3 0 0 3 3 3 0 Putative addiction module component ERM PF00769.19 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.06 13.1 25.7 0.069 13.0 25.7 1.0 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Spc7 PF08317.11 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.28 10.0 25.6 0.43 9.4 23.9 1.9 1 1 0 1 1 1 0 Spc7 kinetochore protein ADIP PF11559.8 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.73 9.9 25.1 82 3.3 24.9 2.7 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding Phage_GP20 PF06810.11 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 0.83 9.4 26.1 1.1 9.1 5.6 3.2 1 1 1 3 3 3 0 Phage minor structural protein GP20 V_ATPase_I PF01496.19 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 1 7.2 19.8 1.2 7.0 19.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family UPF0061 PF02696.14 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 1.2 7.9 8.9 1.4 7.6 8.9 1.1 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family Striatin PF08232.12 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 1.7 9.2 18.8 0.27 11.8 14.2 1.8 1 1 1 2 2 2 0 Striatin family Exonuc_VII_L PF02601.15 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 2.2 7.8 14.4 3.2 7.2 14.4 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit TPR_MLP1_2 PF07926.12 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 2.5 8.2 25.1 8.3 6.5 19.2 3.1 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein NPV_P10 PF05531.12 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 4.1 7.9 14.2 32 5.1 7.9 3.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Syntaxin-6_N PF09177.11 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 4.3 8.0 15.9 68 4.1 15.9 2.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal SOGA PF11365.8 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 6.5 8.0 18.6 0.55 11.4 9.8 2.7 1 1 1 2 2 2 0 Protein SOGA YtxH PF12732.7 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 7 7.3 8.8 57 4.4 5.1 3.1 1 1 1 2 2 2 0 YtxH-like protein APG6_N PF17675.1 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 7.7 7.0 28.1 0.38 11.3 16.9 2.6 1 1 2 3 3 3 0 Apg6 coiled-coil region Spc24 PF08286.11 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 8.3 6.7 22.2 18 5.6 12.5 3.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 SlyX PF04102.12 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 8.8 7.0 19.0 2.3 8.9 2.9 3.5 2 1 1 3 3 3 0 SlyX DHR10 PF18595.1 NODE_41478_length_494_cov_42.586057_g33920_i0forward_frame_1 - 9.1 6.4 27.5 2.5 8.2 17.9 3.2 2 1 0 2 2 2 0 Designed helical repeat protein 10 domain Shikimate_DH PF01488.20 NODE_41477_length_494_cov_50.143791_g33919_i0forward_frame_1 - 0.00055 20.0 0.0 0.00077 19.5 0.0 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GFO_IDH_MocA PF01408.22 NODE_41477_length_494_cov_50.143791_g33919_i0forward_frame_1 - 0.00061 20.6 0.1 0.0016 19.2 0.0 1.7 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold F420_oxidored PF03807.17 NODE_41477_length_494_cov_50.143791_g33919_i0forward_frame_1 - 0.1 13.2 0.2 0.23 12.1 0.0 1.6 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Stc1 PF12898.7 NODE_41464_length_494_cov_144.309368_g33906_i0reverse_frame_1 - 0.0026 18.3 1.7 0.0045 17.5 1.7 1.4 1 0 0 1 1 1 1 Stc1 domain DAGK_cat PF00781.24 NODE_41464_length_494_cov_144.309368_g33906_i0reverse_frame_1 - 0.13 11.9 0.0 2 8.1 0.0 2.1 1 1 1 2 2 2 0 Diacylglycerol kinase catalytic domain APH PF01636.23 NODE_41456_length_494_cov_332.954248_g33898_i0forward_frame_1 - 0.0014 18.6 0.0 0.0021 18.0 0.0 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 NODE_41456_length_494_cov_332.954248_g33898_i0forward_frame_1 - 0.071 12.5 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain DUF974 PF06159.13 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_1 - 0.036 13.9 1.2 0.047 13.5 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF974) Tafi-CsgC PF10610.9 NODE_41442_length_495_cov_2.606522_g33886_i0forward_frame_1 - 0.00044 20.4 0.0 0.0019 18.4 0.0 2.1 1 0 0 1 1 1 1 Thin aggregative fimbriae synthesis protein MBA1 PF07961.11 NODE_41441_length_495_cov_2.843478_g33885_i0reverse_frame_1 - 0.039 13.0 0.2 0.054 12.6 0.2 1.2 1 0 0 1 1 1 0 MBA1-like protein RPA PF10134.9 NODE_41441_length_495_cov_2.843478_g33885_i0reverse_frame_1 - 0.093 12.2 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 Replication initiator protein A CheR_N PF03705.15 NODE_41441_length_495_cov_2.843478_g33885_i0forward_frame_1 - 1e-18 66.8 1.7 1.5e-18 66.3 1.7 1.3 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain PriC PF07445.12 NODE_41441_length_495_cov_2.843478_g33885_i0forward_frame_1 - 0.014 15.3 2.6 0.017 15.1 2.6 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC DUF4948 PF16306.5 NODE_41441_length_495_cov_2.843478_g33885_i0forward_frame_1 - 0.12 12.2 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4948) Synaptobrevin PF00957.21 NODE_41441_length_495_cov_2.843478_g33885_i0forward_frame_1 - 0.21 11.4 5.0 0.31 10.9 2.4 2.0 2 0 0 2 2 2 0 Synaptobrevin PAN_2 PF08276.11 NODE_41436_length_495_cov_4.358696_g33880_i0forward_frame_1 - 7.7 6.7 11.5 1.4 9.1 1.6 2.6 3 0 0 3 3 3 0 PAN-like domain DUF2477 PF10631.9 NODE_41429_length_495_cov_65.180435_g33874_i0reverse_frame_1 - 0.025 15.2 1.7 0.025 15.2 1.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2477) XRN1_DBM PF18245.1 NODE_41429_length_495_cov_65.180435_g33874_i0forward_frame_1 - 0.78 9.8 2.5 1.4 9.0 0.1 2.4 3 0 0 3 3 3 0 5-3 exonuclease XRN1 DCP1-binding motif DUF4231 PF14015.6 NODE_41427_length_495_cov_74.356522_g33872_i0forward_frame_1 - 9.4 6.8 9.1 0.44 11.0 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) DUF4701 PF15773.5 NODE_41421_length_495_cov_90.319565_g33866_i0reverse_frame_1 - 0.032 13.3 0.1 0.038 13.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4701) Ribosomal_S25 PF03297.15 NODE_41397_length_495_cov_3496.858696_g33844_i0reverse_frame_1 - 2.6e-28 98.2 3.1 2.6e-28 98.2 3.1 2.1 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 NODE_41397_length_495_cov_3496.858696_g33844_i0reverse_frame_1 - 0.0096 15.5 0.5 0.012 15.2 0.5 1.2 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 NODE_41397_length_495_cov_3496.858696_g33844_i0reverse_frame_1 - 0.096 12.3 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 NODE_41397_length_495_cov_3496.858696_g33844_i0reverse_frame_1 - 0.49 10.8 6.4 24 5.4 6.4 2.2 1 1 0 1 1 1 0 Recombinase Ammonium_transp PF00909.21 NODE_41395_length_495_cov_4863.173913_g33842_i0forward_frame_1 - 7e-07 28.3 0.0 1e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Ammonium Transporter Family DUF3127 PF11325.8 NODE_41391_length_496_cov_1.989154_g33838_i0reverse_frame_2 - 0.026 14.8 0.7 0.24 11.7 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3127) DUF3784 PF12650.7 NODE_41391_length_496_cov_1.989154_g33838_i0forward_frame_2 - 0.034 14.3 0.3 0.034 14.3 0.3 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF3784) Silic_transp PF03842.13 NODE_41385_length_496_cov_2.362256_g33832_i0reverse_frame_2 - 0.0034 15.8 0.1 0.0045 15.4 0.1 1.1 1 0 0 1 1 1 1 Silicon transporter Pox_L5 PF04872.13 NODE_41385_length_496_cov_2.362256_g33832_i0reverse_frame_2 - 0.16 11.9 1.2 0.19 11.6 0.1 1.7 2 0 0 2 2 2 0 Poxvirus L5 protein family Nop52 PF05997.12 NODE_41384_length_496_cov_2.527115_g33831_i0reverse_frame_3 - 3.7e-32 111.9 4.5 4.5e-32 111.6 4.5 1.0 1 0 0 1 1 1 1 Nucleolar protein,Nop52 TAN PF11640.8 NODE_41384_length_496_cov_2.527115_g33831_i0reverse_frame_3 - 0.072 13.2 0.1 0.14 12.3 0.1 1.6 1 1 0 1 1 1 0 Telomere-length maintenance and DNA damage repair Imm43 PF15570.6 NODE_41383_length_496_cov_2.574837_g33830_i0forward_frame_2 - 0.38 10.8 4.4 1 9.4 0.5 2.2 1 1 1 2 2 2 0 Immunity protein 43 Ribosomal_L28e PF01778.17 NODE_41372_length_496_cov_49.286334_g33819_i0reverse_frame_2 - 2.9e-15 57.0 0.3 2.9e-15 57.0 0.3 1.9 2 0 0 2 2 2 1 Ribosomal L28e protein family ComC PF03047.14 NODE_41369_length_496_cov_58.318872_g33816_i0forward_frame_3 - 0.91 9.4 3.1 5.7 6.9 0.1 2.6 2 0 0 2 2 2 0 COMC family PaaX_C PF08223.11 NODE_41357_length_496_cov_98.932755_g33805_i0forward_frame_3 - 0.012 15.9 0.1 0.048 13.9 0.0 1.9 1 1 2 3 3 3 0 PaaX-like protein C-terminal domain Aa_trans PF01490.18 NODE_41346_length_496_cov_207.867679_g33795_i0reverse_frame_2 - 0.0078 15.0 0.2 0.013 14.2 0.0 1.4 2 0 0 2 2 2 1 Transmembrane amino acid transporter protein Oxidored-like PF09791.9 NODE_41346_length_496_cov_207.867679_g33795_i0forward_frame_3 - 0.39 10.4 5.3 3.4 7.4 0.6 2.5 2 0 0 2 2 2 0 Oxidoreductase-like protein, N-terminal Spec3 PF15795.5 NODE_41340_length_496_cov_405.481562_g33789_i0forward_frame_3 - 0.033 14.7 0.5 0.052 14.1 0.5 1.3 1 0 0 1 1 1 0 Ectodermal ciliogenesis protein Svs_4_5_6 PF17381.2 NODE_41324_length_497_cov_1.603896_g33776_i0forward_frame_3 - 2.9 8.9 9.3 0.26 12.3 3.5 2.0 1 1 1 2 2 2 0 Seminal vesicle secretory proteins 4/5/6 DUF334 PF03904.13 NODE_41324_length_497_cov_1.603896_g33776_i0forward_frame_3 - 3.9 6.9 19.0 0.033 13.7 5.4 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF334) DUF2070 PF09843.9 NODE_41322_length_497_cov_1.755411_g33774_i0reverse_frame_3 - 7 4.8 6.4 7.8 4.7 6.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Myotub-related PF06602.14 NODE_41321_length_497_cov_1.764069_g33773_i0forward_frame_3 - 1.4e-72 244.6 2.8 1.6e-72 244.4 2.8 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain Y_phosphatase PF00102.27 NODE_41321_length_497_cov_1.764069_g33773_i0forward_frame_3 - 0.00022 20.8 0.0 0.00032 20.3 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.20 NODE_41321_length_497_cov_1.764069_g33773_i0forward_frame_3 - 0.0029 17.4 0.0 0.005 16.7 0.0 1.4 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 NODE_41321_length_497_cov_1.764069_g33773_i0forward_frame_3 - 0.02 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family Hum_adeno_E3A PF05393.11 NODE_41313_length_497_cov_2.619048_g33765_i0forward_frame_3 - 9.1 6.3 7.6 1.6 8.8 3.3 1.9 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein DUF1590 PF07629.11 NODE_41309_length_497_cov_3.398268_g33761_i0reverse_frame_3 - 0.077 12.8 1.2 2.3 8.1 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1590) GSDH PF07995.11 NODE_41309_length_497_cov_3.398268_g33761_i0forward_frame_3 - 3.7e-68 230.3 0.9 4e-68 230.2 0.9 1.0 1 0 0 1 1 1 1 Glucose / Sorbosone dehydrogenase Flp_C PF05202.12 NODE_41307_length_497_cov_5.188312_g33759_i0forward_frame_3 - 0.33 10.4 4.7 0.25 10.8 3.6 1.4 1 1 0 1 1 1 0 Recombinase Flp protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks150.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks150.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks150.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks150.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RCC1_2 PF13540.6 NODE_41286_length_497_cov_143.082251_g33738_i0reverse_frame_2 - 7.2e-19 67.1 23.9 5.3e-08 32.5 1.8 3.8 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat DUF5428 PF17493.2 NODE_41286_length_497_cov_143.082251_g33738_i0reverse_frame_2 - 0.25 11.8 0.3 3.4 8.2 0.2 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF5428) RCC1 PF00415.18 NODE_41286_length_497_cov_143.082251_g33738_i0reverse_frame_2 - 0.31 11.7 24.3 1.8 9.2 4.8 5.0 3 2 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat ShK PF01549.24 NODE_41286_length_497_cov_143.082251_g33738_i0reverse_frame_2 - 0.83 10.2 5.7 4.9 7.8 0.2 3.1 4 0 0 4 4 4 0 ShK domain-like COMM_domain PF07258.14 NODE_41273_length_497_cov_364.662338_g33353_i1reverse_frame_3 - 0.052 13.7 0.4 0.083 13.0 0.4 1.3 1 0 0 1 1 1 0 COMM domain EF-hand_8 PF13833.6 NODE_41273_length_497_cov_364.662338_g33353_i1reverse_frame_2 - 0.0075 16.1 0.7 0.012 15.4 0.7 1.4 1 0 0 1 1 1 1 EF-hand domain pair EspA PF03433.13 NODE_41273_length_497_cov_364.662338_g33353_i1reverse_frame_2 - 0.021 14.7 4.6 0.027 14.3 4.6 1.1 1 0 0 1 1 1 0 EspA-like secreted protein Ufd2P_core PF10408.9 NODE_41269_length_498_cov_1.958963_g33724_i0forward_frame_3 - 0.0025 16.5 0.0 0.0029 16.3 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin elongating factor core Kelch_1 PF01344.25 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 2.7e-07 30.1 0.2 0.00024 20.6 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 3.1e-07 30.4 1.9 0.00033 20.8 0.0 2.7 2 1 1 3 3 3 2 Kelch motif Kelch_5 PF13854.6 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 5.3e-06 26.3 0.3 0.0044 17.0 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 1.3e-05 25.1 0.1 0.033 14.2 0.0 2.5 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 2.9e-05 23.9 0.2 0.25 11.4 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_41267_length_498_cov_2.460043_g33722_i0reverse_frame_3 - 0.004 17.4 0.2 0.65 10.3 0.0 2.9 3 1 0 3 3 3 1 Galactose oxidase, central domain MIT_LIKE_ACTX PF17556.2 NODE_41267_length_498_cov_2.460043_g33722_i0forward_frame_2 - 0.12 13.0 0.7 23 5.7 0.0 2.6 3 0 0 3 3 3 0 MIT-like atracotoxin family Prominin PF05478.11 NODE_41264_length_498_cov_2.792657_g33719_i0reverse_frame_2 - 2.4 6.0 5.1 3 5.7 5.1 1.1 1 0 0 1 1 1 0 Prominin PapC_N PF13954.6 NODE_41264_length_498_cov_2.792657_g33719_i0forward_frame_2 - 6.2e-30 104.1 0.0 7.1e-30 103.9 0.0 1.0 1 0 0 1 1 1 1 PapC N-terminal domain bZIP_1 PF00170.21 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.0034 17.5 10.0 0.077 13.1 0.5 3.3 2 2 2 4 4 4 2 bZIP transcription factor Troponin PF00992.20 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.0042 17.4 1.7 0.0042 17.4 1.7 2.1 1 1 1 2 2 2 1 Troponin LRRFIP PF09738.9 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.02 14.4 17.6 0.036 13.5 17.6 1.3 1 1 0 1 1 1 0 LRRFIP family WD40_alt PF14077.6 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.041 13.7 0.3 0.23 11.3 0.0 2.3 2 0 0 2 2 2 0 Alternative WD40 repeat motif PRKG1_interact PF15898.5 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.061 14.2 13.9 0.33 11.9 4.2 2.5 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain APG6_N PF17675.1 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.23 12.0 15.6 0.42 11.2 9.6 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region YabA PF06156.13 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.41 11.3 13.1 2.2 9.0 3.7 2.4 1 1 1 2 2 2 0 Initiation control protein YabA ZapB PF06005.12 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.45 11.0 14.1 2.2 8.8 7.5 2.9 1 1 1 2 2 2 0 Cell division protein ZapB JIP_LZII PF16471.5 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.45 10.7 8.8 0.33 11.2 1.4 2.8 2 1 1 3 3 3 0 JNK-interacting protein leucine zipper II DUF948 PF06103.11 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.51 10.6 4.2 0.84 9.9 0.6 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF4665 PF15679.5 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 0.91 10.2 13.0 0.84 10.3 2.0 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4665) TSC22 PF01166.18 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 1.1 9.6 8.2 22 5.5 0.1 3.5 2 2 1 3 3 3 0 TSC-22/dip/bun family Laminin_II PF06009.12 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 1.5 8.8 13.0 0.53 10.3 3.0 2.2 1 1 1 2 2 2 0 Laminin Domain II DUF641 PF04859.12 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 1.6 9.0 9.3 0.19 12.0 2.5 2.4 1 1 0 2 2 2 0 Plant protein of unknown function (DUF641) SlyX PF04102.12 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 1.7 9.3 9.7 0.32 11.6 1.4 2.7 1 1 2 3 3 3 0 SlyX CENP-H PF05837.12 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 4.5 7.7 13.7 6.9 7.1 1.8 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DUF848 PF05852.11 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 5.3 7.1 10.1 12 6.0 6.6 2.2 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) DUF3450 PF11932.8 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 5.3 6.3 11.7 9.4 5.5 4.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF724 PF05266.14 NODE_41263_length_498_cov_3.069114_g33718_i0reverse_frame_2 - 7.7 6.3 15.0 3.6 7.4 3.7 2.1 1 1 2 3 3 3 0 Protein of unknown function (DUF724) Pacifastin_I PF05375.13 NODE_41262_length_498_cov_3.215983_g33717_i0reverse_frame_3 - 0.03 14.1 4.0 0.074 12.8 4.0 1.7 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) Transposase_21 PF02992.14 NODE_41262_length_498_cov_3.215983_g33717_i0reverse_frame_2 - 0.2 10.9 3.9 0.26 10.5 0.9 2.0 2 0 0 2 2 2 0 Transposase family tnp2 DASH_Ask1 PF08655.10 NODE_41252_length_498_cov_70.207343_g33707_i0reverse_frame_3 - 0.11 12.5 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 DASH complex subunit Ask1 TLD PF07534.16 NODE_41245_length_498_cov_86.898488_g33700_i0forward_frame_3 - 0.049 13.8 0.2 0.066 13.4 0.2 1.1 1 0 0 1 1 1 0 TLD YqaH PF17448.2 NODE_41238_length_498_cov_107.250540_g33693_i0reverse_frame_2 - 0.045 14.1 0.0 0.091 13.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized YqaH-like AP2 PF00847.20 NODE_41238_length_498_cov_107.250540_g33693_i0reverse_frame_2 - 0.091 13.0 0.0 0.47 10.7 0.0 2.0 2 0 0 2 2 2 0 AP2 domain Borrelia_rep PF03183.13 ORF99394 - 0.0081 16.1 4.7 0.0081 16.1 4.7 4.9 5 1 0 5 5 5 1 Borrelia repeat protein DUF5533 PF17685.1 ORF99394 - 0.036 14.5 4.7 0.064 13.6 4.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5533) Abhydrolase_1 PF00561.20 ORF97504 - 0.03 13.9 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Thg1C PF14413.6 ORF97504 - 0.068 13.3 0.6 0.35 11.0 0.1 1.9 1 1 1 2 2 2 0 Thg1 C terminal domain DUF1684 PF07920.11 ORF97504 - 0.078 13.3 0.0 0.091 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1684) Cytochrom_C1 PF02167.15 ORF97504 - 0.098 12.4 0.0 0.22 11.2 0.0 1.6 2 0 0 2 2 2 0 Cytochrome C1 family LupA PF18242.1 ORF97360 - 0.089 12.4 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Legionella ubiquitin-specific protease A domain HNH PF01844.23 ORF9602 - 0.015 15.5 0.6 0.015 15.5 0.6 1.9 2 0 0 2 2 2 0 HNH endonuclease HATPase_c PF02518.26 ORF96015 - 5.6e-17 62.3 0.0 7.9e-17 61.8 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF96015 - 0.00013 21.8 0.2 0.00018 21.3 0.2 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 ORF96015 - 0.022 14.7 0.0 0.037 13.9 0.0 1.4 1 0 0 1 1 1 0 GHKL domain HATPase_c_2 PF13581.6 ORF96015 - 0.024 14.6 0.0 0.037 14.0 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain UxuA PF03786.13 ORF95292 - 4.6e-70 236.2 0.3 5.2e-70 236.0 0.3 1.0 1 0 0 1 1 1 1 D-mannonate dehydratase (UxuA) Delta_lysin PF05372.11 ORF95292 - 0.0072 15.6 0.0 0.017 14.4 0.0 1.6 1 0 0 1 1 1 1 Delta lysin family AP_endonuc_2 PF01261.24 ORF95292 - 0.056 12.9 0.1 0.096 12.1 0.0 1.5 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel RRXRR PF14239.6 ORF94019 - 0.037 13.9 0.8 0.045 13.6 0.8 1.2 1 0 0 1 1 1 0 RRXRR protein Metallophos PF00149.28 ORF92879 - 4e-09 37.3 0.1 6.6e-09 36.6 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase EF-hand_1 PF00036.32 ORF91465 - 9.2e-15 53.0 6.3 2.3e-05 23.6 0.1 4.4 4 0 0 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF91465 - 2.4e-14 53.6 15.5 2.4e-06 27.9 1.1 3.1 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF91465 - 8.9e-14 50.2 7.2 4.8e-06 26.1 0.2 4.4 4 0 0 4 4 4 3 EF-hand domain EF-hand_9 PF14658.6 ORF91465 - 5.6e-11 42.6 1.1 2.4e-08 34.2 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF91465 - 3.3e-10 39.0 6.0 2.1e-05 23.8 0.4 3.6 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF91465 - 3.2e-06 26.9 12.3 0.06 13.2 0.1 4.0 1 1 3 4 4 4 3 EF-hand domain pair Caleosin PF05042.13 ORF91465 - 0.001 19.1 0.2 0.46 10.4 0.0 2.3 2 0 0 2 2 2 2 Caleosin related protein DUF2666 PF10869.8 ORF91465 - 0.0034 17.6 1.2 0.067 13.4 0.1 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF2666) DUF592 PF04574.13 ORF91465 - 0.026 14.3 1.2 0.047 13.5 1.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF592) SPARC_Ca_bdg PF10591.9 ORF91465 - 0.053 13.8 0.5 0.053 13.8 0.5 2.4 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Toprim_2 PF13155.6 ORF91465 - 0.068 13.6 2.2 8 7.0 0.1 2.5 1 1 1 2 2 2 0 Toprim-like Borrelia_rep PF03183.13 ORF90781 - 0.0081 16.1 4.7 0.0081 16.1 4.7 4.9 5 1 0 5 5 5 1 Borrelia repeat protein DUF5533 PF17685.1 ORF90781 - 0.036 14.5 4.7 0.064 13.6 4.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5533) AAA_32 PF13654.6 ORF90620 - 0.061 12.1 0.2 0.083 11.7 0.2 1.1 1 0 0 1 1 1 0 AAA domain Romo1 PF10247.9 ORF89463 - 1.7e-08 34.7 14.5 2.4e-08 34.2 14.5 1.3 1 0 0 1 1 1 1 Reactive mitochondrial oxygen species modulator 1 DUF2207 PF09972.9 ORF89463 - 0.11 11.2 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) HPP PF04982.13 ORF8902 - 0.0027 17.9 7.7 0.0042 17.2 7.7 1.4 1 0 0 1 1 1 1 HPP family DUF4781 PF16013.5 ORF8902 - 0.16 10.7 0.3 0.17 10.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) HMGL-like PF00682.19 ORF86915 - 6.8e-27 94.7 0.1 7.7e-27 94.5 0.1 1.0 1 0 0 1 1 1 1 HMGL-like Metallophos_2 PF12850.7 ORF86677 - 3.9e-06 27.2 0.0 4.9e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 ORF86677 - 0.028 14.9 0.1 0.034 14.6 0.1 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase Phage_tail_NK PF16532.5 ORF85605 - 0.091 12.4 0.7 0.15 11.7 0.7 1.3 1 0 0 1 1 1 0 Sf6-type phage tail needle knob or tip of some Caudovirales Borrelia_rep PF03183.13 ORF83262 - 0.0081 16.1 4.7 0.0081 16.1 4.7 4.9 5 1 0 5 5 5 1 Borrelia repeat protein DUF5533 PF17685.1 ORF83262 - 0.036 14.5 4.7 0.064 13.6 4.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5533) DNA_RNApol_7kD PF03604.13 ORF8162 - 0.57 9.9 6.0 1.4 8.7 0.0 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit EF-hand_6 PF13405.6 ORF81277 - 4.6e-09 35.5 0.2 7.4e-05 22.4 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF81277 - 2e-07 30.1 0.3 0.00022 20.5 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF81277 - 2.7e-07 30.9 0.0 5.8e-07 29.9 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF81277 - 6.6e-07 28.5 0.4 0.016 14.7 0.0 2.4 2 0 0 2 2 2 2 EF hand Not3 PF04065.15 ORF81277 - 0.0049 16.3 0.0 0.0062 16.0 0.0 1.1 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component Csm1_N PF18504.1 ORF81277 - 0.044 14.1 1.9 0.081 13.3 1.9 1.5 1 0 0 1 1 1 0 Csm1 N-terminal domain DivIC PF04977.15 ORF81277 - 0.046 13.5 2.1 0.083 12.7 2.1 1.4 1 0 0 1 1 1 0 Septum formation initiator EF-hand_8 PF13833.6 ORF81277 - 0.057 13.3 0.3 8.9 6.2 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain pair DUF5102 PF17104.5 ORF81277 - 0.12 12.4 1.3 0.33 11.0 1.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5102) DUF4140 PF13600.6 ORF81277 - 0.51 10.8 5.2 0.45 11.0 3.2 1.9 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) ANAPC1 PF12859.7 ORF80815 - 0.059 13.9 0.7 0.091 13.3 0.7 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 CSD PF00313.22 ORF76869 - 3.5e-05 23.6 0.4 5.6e-05 22.9 0.4 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CoA_transf_3 PF02515.17 ORF75114 - 1.4e-29 103.4 0.0 1.5e-29 103.3 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III zf-RING_2 PF13639.6 ORF72746 - 1.6e-10 41.1 9.6 2.3e-10 40.6 9.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF72746 - 1.1e-08 34.7 8.1 1.1e-08 34.7 8.1 1.7 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF72746 - 2.8e-06 27.1 9.6 4.4e-06 26.5 9.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF72746 - 3.6e-06 27.2 10.6 2e-05 24.8 10.6 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF72746 - 5e-05 23.2 8.7 7.4e-05 22.6 8.7 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF72746 - 8.4e-05 22.5 7.8 0.00015 21.7 7.8 1.5 1 0 0 1 1 1 1 RING-type zinc-finger FANCL_C PF11793.8 ORF72746 - 9.5e-05 22.5 8.9 0.00025 21.2 8.9 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 ORF72746 - 0.00022 21.0 6.4 0.00031 20.5 6.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF72746 - 0.00051 19.8 9.4 0.0013 18.6 9.4 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF72746 - 0.0015 18.1 9.5 0.0039 16.8 9.3 1.7 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type zf-HC5HC2H_2 PF13832.6 ORF72746 - 0.0088 16.2 3.7 0.015 15.5 3.6 1.5 1 1 0 1 1 1 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 ORF72746 - 0.011 16.0 5.1 0.022 15.0 4.9 1.6 1 1 0 1 1 1 0 PHD-like zinc-binding domain Prok-RING_1 PF14446.6 ORF72746 - 0.012 15.5 8.6 0.019 14.9 4.4 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Endonuclease_7 PF02945.15 ORF72746 - 0.018 14.9 3.4 0.028 14.3 3.4 1.3 1 0 0 1 1 1 0 Recombination endonuclease VII Rtf2 PF04641.12 ORF72746 - 0.019 14.4 2.3 0.03 13.7 2.3 1.4 1 1 0 1 1 1 0 Rtf2 RING-finger zf-ANAPC11 PF12861.7 ORF72746 - 0.022 14.8 6.4 0.095 12.8 6.4 2.1 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 ORF72746 - 0.094 12.9 7.5 0.16 12.2 7.5 1.4 1 0 0 1 1 1 0 RING-variant domain PHD PF00628.29 ORF72746 - 0.11 12.5 7.8 0.18 11.7 7.8 1.4 1 0 0 1 1 1 0 PHD-finger zf-RING-like PF08746.11 ORF72746 - 0.23 11.8 7.5 0.41 11.0 7.5 1.5 1 0 0 1 1 1 0 RING-like domain zf-C3HC4_4 PF15227.6 ORF72746 - 0.3 11.3 5.6 0.86 9.8 5.6 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Carboxyl_trans PF01039.22 ORF7202 - 0.14 10.7 0.0 0.19 10.3 0.0 1.1 1 0 0 1 1 1 0 Carboxyl transferase domain Toxin_3 PF00537.18 ORF67421 - 0.013 15.6 2.1 0.072 13.3 1.4 2.4 2 0 0 2 2 2 0 Scorpion toxin-like domain NYAP_C PF15452.6 ORF67196 - 0.0026 17.6 0.4 0.93 9.3 0.0 2.1 2 0 0 2 2 2 2 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter DUF4637 PF15470.6 ORF64966 - 0.072 12.8 0.1 0.17 11.6 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Asp PF00026.23 ORF6489 - 1.8e-06 27.6 0.0 2.2e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Borrelia_rep PF03183.13 ORF63728 - 0.0081 16.1 4.7 0.0081 16.1 4.7 4.9 5 1 0 5 5 5 1 Borrelia repeat protein DUF5533 PF17685.1 ORF63728 - 0.036 14.5 4.7 0.064 13.6 4.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5533) Tox-ART-HYE1 PF15634.6 ORF62421 - 0.012 14.9 5.4 0.015 14.6 5.4 1.1 1 0 0 1 1 1 0 HYE1 signature containing ADP-ribosyltransferase Tim17 PF02466.19 ORF61167 - 2e-07 31.4 0.9 3.6e-07 30.5 0.9 1.5 1 1 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Remorin_C PF03763.13 ORF59402 - 0.014 15.3 0.8 0.014 15.3 0.8 2.1 1 1 1 2 2 2 0 Remorin, C-terminal region DUF3783 PF12646.7 ORF59402 - 0.066 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3783) TRIQK PF15168.6 ORF59402 - 1.2 9.1 3.8 0.94 9.4 1.7 1.9 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family Borrelia_rep PF03183.13 ORF59158 - 0.0081 16.1 4.7 0.0081 16.1 4.7 4.9 5 1 0 5 5 5 1 Borrelia repeat protein DUF5533 PF17685.1 ORF59158 - 0.036 14.5 4.7 0.064 13.6 4.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5533) DUF3169 PF11368.8 ORF58325 - 0.0033 17.0 1.2 0.035 13.6 1.4 1.9 1 1 1 2 2 2 2 Protein of unknown function (DUF3169) ERGIC_N PF13850.6 ORF58325 - 0.045 14.1 0.1 0.067 13.5 0.1 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF2062 PF09835.9 ORF58325 - 0.11 12.4 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) IBV_3A PF03617.13 ORF57906 - 5.6 7.0 9.1 0.14 12.2 1.8 2.2 3 0 0 3 3 3 0 IBV 3A protein SprT-like PF10263.9 ORF56654 - 2.8e-16 59.4 0.1 3.4e-16 59.1 0.1 1.3 1 0 0 1 1 1 1 SprT-like family Zn_ribbon_SprT PF17283.2 ORF56654 - 1.5e-09 37.6 4.7 2.7e-09 36.8 4.7 1.5 1 0 0 1 1 1 1 SprT-like zinc ribbon domain DUF45 PF01863.17 ORF56654 - 0.00014 22.0 0.1 0.00067 19.8 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function DUF45 DUF3267 PF11667.8 ORF56654 - 0.049 13.9 0.1 0.073 13.4 0.1 1.4 1 0 0 1 1 1 0 Putative zincin peptidase Desulfoferrod_N PF06397.12 ORF56654 - 0.19 11.4 0.4 0.19 11.4 0.4 1.6 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Sigma_reg_C PF13791.6 ORF55190 - 0.012 15.8 0.6 0.016 15.5 0.6 1.2 1 0 0 1 1 1 0 Sigma factor regulator C-terminal DHR10 PF18595.1 ORF55093 - 0.0096 16.0 0.4 0.0096 16.0 0.4 1.7 2 0 0 2 2 2 1 Designed helical repeat protein 10 domain GAS PF13851.6 ORF55093 - 0.011 15.1 0.7 0.015 14.7 0.7 1.1 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding HAUS-augmin3 PF14932.6 ORF55093 - 0.021 14.4 0.2 0.026 14.1 0.2 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Filament PF00038.21 ORF55093 - 0.035 13.7 1.7 0.039 13.5 1.7 1.2 1 0 0 1 1 1 0 Intermediate filament protein DUF4455 PF14643.6 ORF55093 - 0.036 12.7 0.7 0.069 11.8 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4455) HALZ PF02183.18 ORF55093 - 0.48 10.7 5.2 48 4.3 0.7 3.1 3 0 0 3 3 3 0 Homeobox associated leucine zipper DUF494 PF04361.13 ORF54907 - 6.7e-58 194.9 4.4 7.5e-58 194.7 4.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF494) Amido_AtzD_TrzD PF09663.10 ORF54222 - 0.056 12.5 0.0 0.066 12.2 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) AMPK1_CBM PF16561.5 ORF52878 - 0.0059 16.8 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase DUF3565 PF12088.8 ORF52452 - 0.88 9.6 5.7 2.8 8.0 5.7 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3565) DUF2085 PF09858.9 ORF52227 - 0.037 14.5 2.0 0.07 13.6 2.0 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2085) DUF3741 PF12552.8 ORF48507 - 0.0017 18.2 0.5 0.055 13.4 0.2 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3741) efThoc1 PF11957.8 ORF48148 - 8.3e-15 54.4 3.7 1.2e-14 53.9 3.7 1.3 1 0 0 1 1 1 1 THO complex subunit 1 transcription elongation factor AGS_C PF18134.1 ORF48148 - 0.029 14.4 0.3 0.04 13.9 0.3 1.2 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain zf-RING_2 PF13639.6 ORF47782 - 3.4e-08 33.7 7.1 3.4e-08 33.7 7.1 2.4 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 ORF47782 - 6.3e-08 32.5 9.0 6.3e-08 32.5 9.0 3.1 2 1 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF47782 - 1.5e-07 31.3 2.6 1.5e-07 31.3 2.6 3.0 3 1 1 4 4 3 2 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF47782 - 9.2e-07 28.6 4.2 9.2e-07 28.6 4.2 2.5 2 1 0 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF47782 - 1.7e-06 27.8 10.2 1.7e-06 27.8 10.2 3.2 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF47782 - 5.4e-06 26.2 8.6 5.4e-06 26.2 8.6 2.7 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF47782 - 9.9e-06 25.6 3.3 9.9e-06 25.6 3.3 3.4 3 0 0 3 3 3 1 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 ORF47782 - 0.00011 21.9 11.1 0.00011 21.9 11.1 3.2 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF47782 - 0.00012 22.2 4.4 0.00012 22.2 4.4 2.3 2 1 0 2 2 2 1 RING-H2 zinc finger domain DUF5064 PF16703.5 ORF47782 - 0.00051 20.5 0.0 0.0008 19.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5064) zf-B_box PF00643.24 ORF47782 - 0.0022 18.1 7.7 0.0022 18.1 7.7 3.9 4 0 0 4 4 4 1 B-box zinc finger zf-RING_4 PF14570.6 ORF47782 - 0.0067 16.2 8.5 0.0067 16.2 8.5 2.9 2 1 0 2 2 2 1 RING/Ubox like zinc-binding domain zf-ANAPC11 PF12861.7 ORF47782 - 0.016 15.3 2.1 0.016 15.3 2.1 1.7 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Trm112p PF03966.16 ORF47782 - 0.068 13.8 0.8 0.2 12.2 0.8 1.9 1 1 0 1 1 1 0 Trm112p-like protein zf-RING_6 PF14835.6 ORF47782 - 1 9.3 10.5 0.11 12.4 1.6 2.6 2 1 0 2 2 2 0 zf-RING of BARD1-type protein DZR PF12773.7 ORF47782 - 2.2 8.4 15.4 1.4 9.0 7.4 3.1 2 1 0 2 2 2 0 Double zinc ribbon zf-P11 PF03854.14 ORF47782 - 3.6 7.3 19.3 0.18 11.5 7.9 2.7 2 1 0 2 2 2 0 P-11 zinc finger IBR PF01485.21 ORF47782 - 7.9 6.8 25.6 0.53 10.6 8.0 3.5 2 1 1 3 3 2 0 IBR domain, a half RING-finger domain Astacin PF01400.24 ORF46642 - 5.7e-17 62.0 0.0 7.6e-17 61.6 0.0 1.2 1 0 0 1 1 1 1 Astacin (Peptidase family M12A) Peptidase_M10 PF00413.24 ORF46642 - 0.034 14.0 0.1 0.052 13.4 0.1 1.3 1 0 0 1 1 1 0 Matrixin DUF3875 PF12991.7 ORF45770 - 0.19 11.7 0.0 0.34 10.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3875) Conotoxin_I2 PF17557.2 ORF45655 - 0.026 14.6 8.7 0.026 14.6 8.7 2.8 2 0 0 2 2 2 0 I2-superfamily conotoxins DUF1077 PF06417.12 ORF45293 - 2.5e-27 95.2 6.3 3.6e-27 94.7 6.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1077) MIB_HERC2 PF06701.13 ORF45270 - 0.12 12.6 0.1 0.2 11.9 0.1 1.3 1 0 0 1 1 1 0 Mib_herc2 Toxin_3 PF00537.18 ORF43828 - 0.013 15.6 2.1 0.072 13.3 1.4 2.4 2 0 0 2 2 2 0 Scorpion toxin-like domain Borrelia_rep PF03183.13 ORF43008 - 0.0081 16.1 4.7 0.0081 16.1 4.7 4.9 5 0 0 5 5 5 1 Borrelia repeat protein EF-hand_1 PF00036.32 ORF42621 - 6.4e-28 94.2 15.5 7.2e-09 34.6 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF42621 - 9.8e-25 86.8 10.0 4.2e-12 46.3 4.3 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF42621 - 2.6e-21 73.7 9.3 1.1e-08 34.3 0.1 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF42621 - 5.9e-18 64.5 12.8 3e-09 36.6 1.1 3.7 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF42621 - 6.4e-15 55.2 0.2 2.9e-08 33.9 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF42621 - 2.7e-08 32.9 9.1 1.5e-05 24.3 0.3 4.2 4 0 0 4 4 4 2 EF hand EF-hand_14 PF17959.1 ORF42621 - 0.0024 18.2 1.4 0.67 10.3 0.2 2.5 1 1 2 3 3 3 1 EF-hand domain EF-hand_4 PF12763.7 ORF42621 - 0.0028 17.6 6.6 0.44 10.5 0.1 3.3 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF42621 - 0.0033 17.7 1.0 0.95 9.8 0.0 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region DUF3349 PF11829.8 ORF42621 - 0.0056 17.4 1.7 0.94 10.3 0.0 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF3349) UPF0154 PF03672.13 ORF42621 - 0.01 15.8 0.0 1.9 8.6 0.0 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 ORF42621 - 0.012 15.7 3.8 1.4 9.2 0.2 2.8 2 1 1 3 3 3 0 Dockerin type I domain MgtE_N PF03448.17 ORF42621 - 0.042 14.5 4.3 0.047 14.3 0.7 2.5 3 0 0 3 3 3 0 MgtE intracellular N domain SurA_N_3 PF13624.6 ORF42621 - 0.048 13.5 1.3 2.6 7.8 0.3 2.2 1 1 1 2 2 2 0 SurA N-terminal domain SurA_N_2 PF13623.6 ORF42621 - 0.051 13.4 0.8 1.6 8.6 0.2 2.4 2 1 0 2 2 2 0 SurA N-terminal domain SUB1_ProdP9 PF18213.1 ORF42621 - 0.069 13.0 2.1 0.086 12.7 0.4 2.0 2 0 0 2 2 2 0 SUB1 protease Prodomain ProdP9 DUF1296 PF06972.11 ORF42621 - 0.071 13.3 1.4 0.2 11.8 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1296) TerB PF05099.13 ORF42621 - 0.086 12.8 3.4 2.5 8.0 0.0 2.7 1 1 2 3 3 3 0 Tellurite resistance protein TerB FlgD PF03963.14 ORF42621 - 0.088 13.1 0.0 0.26 11.6 0.0 1.9 2 1 0 2 2 2 0 Flagellar hook capping protein - N-terminal region Acetyltransf_11 PF13720.6 ORF42621 - 0.12 12.9 0.4 2.1 8.9 0.0 2.3 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF3008 PF11450.8 ORF42621 - 0.12 12.6 0.6 0.23 11.6 0.2 1.7 2 0 0 2 2 1 0 Protein of unknwon function (DUF3008) Cellulase PF00150.18 ORF42418 - 0.00029 20.4 1.0 0.00037 20.0 1.0 1.1 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) UQ_con PF00179.26 ORF42384 - 0.0016 18.1 0.0 0.0023 17.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme TipE PF16972.5 ORF40732 - 0.39 9.8 5.9 0.48 9.5 5.9 1.1 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE Pep1_7 PF17232.2 ORF40732 - 4 8.0 5.4 8.3 7.0 5.4 1.6 1 0 0 1 1 1 0 Elicitor peptide 1-7 RRM_1 PF00076.22 ORF39287 - 4.7e-11 42.3 0.0 6.7e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Prion PF00377.18 ORF38461 - 0.19 11.5 0.0 0.33 10.8 0.0 1.3 1 0 0 1 1 1 0 Prion/Doppel alpha-helical domain MFS_1 PF07690.16 ORF38249 - 8.5e-07 28.2 9.2 9.8e-07 28.0 9.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily cNMP_binding PF00027.29 ORF36797 - 0.00025 21.0 0.0 0.00047 20.2 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DTHCT PF08070.11 ORF35044 - 7.4 7.4 59.2 0.15 12.8 24.1 3.2 1 1 2 3 3 3 0 DTHCT (NUC029) region PSI_integrin PF17205.3 ORF3386 - 0.0096 15.6 3.9 0.019 14.7 3.9 1.5 1 0 0 1 1 1 1 Integrin plexin domain Tat PF00539.18 ORF3386 - 0.11 12.7 4.8 0.2 11.8 4.8 1.5 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) Rnf-Nqr PF02508.14 ORF33840 - 7.9e-50 169.2 18.0 8.7e-50 169.1 18.0 1.0 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein CLP_protease PF00574.23 ORF3199 - 1.4e-73 246.6 0.0 1.7e-73 246.4 0.0 1.0 1 0 0 1 1 1 1 Clp protease DUF417 PF04224.12 ORF316 - 0.11 12.0 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF417 AAA_32 PF13654.6 ORF30898 - 0.061 12.1 0.2 0.083 11.7 0.2 1.1 1 0 0 1 1 1 0 AAA domain SHIPPO-rpt PF07004.12 ORF2982 - 0.00097 19.9 13.8 0.013 16.4 2.7 3.9 3 2 0 3 3 3 2 Sperm-tail PG-rich repeat Uds1 PF15456.6 ORF29239 - 0.2 11.8 4.1 2.5 8.3 4.0 2.1 1 1 1 2 2 2 0 Up-regulated During Septation SHIPPO-rpt PF07004.12 ORF28978 - 0.00097 19.9 13.8 0.013 16.4 2.7 3.9 3 2 0 3 3 3 2 Sperm-tail PG-rich repeat DUF3304 PF11745.8 ORF27273 - 3.7 8.0 6.5 0.21 12.0 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3304) DUF4845 PF16137.5 ORF27115 - 0.036 14.9 0.4 0.085 13.7 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4845) Nucleoporin_FG2 PF15967.5 ORF26997 - 0.059 11.9 7.8 0.064 11.8 7.8 1.1 1 0 0 1 1 1 0 Nucleoporin FG repeated region efThoc1 PF11957.8 ORF26854 - 8.3e-15 54.4 3.7 1.2e-14 53.9 3.7 1.3 1 0 0 1 1 1 1 THO complex subunit 1 transcription elongation factor AGS_C PF18134.1 ORF26854 - 0.029 14.4 0.3 0.04 13.9 0.3 1.2 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain Sigma_reg_C PF13791.6 ORF26051 - 0.028 14.6 0.6 0.037 14.2 0.6 1.2 1 0 0 1 1 1 0 Sigma factor regulator C-terminal Fer4_20 PF14691.6 ORF24405 - 6.4 6.6 11.0 0.43 10.4 2.6 2.2 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EF-hand_1 PF00036.32 ORF24157 - 1e-29 99.8 12.7 3.5e-09 35.5 1.2 4.1 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF24157 - 6.8e-28 96.9 7.2 2e-13 50.6 0.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF24157 - 2.5e-22 78.5 10.5 6.6e-12 45.1 0.9 3.7 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF24157 - 1e-20 71.8 7.1 1.9e-08 33.5 0.1 4.2 4 1 0 4 4 4 3 EF-hand domain EF-hand_9 PF14658.6 ORF24157 - 6.9e-16 58.3 0.1 7.3e-07 29.4 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF24157 - 9.9e-12 43.8 10.9 1.5e-05 24.2 0.3 3.8 4 0 0 4 4 4 3 EF hand EF-hand_4 PF12763.7 ORF24157 - 2.4e-05 24.2 3.0 0.28 11.2 0.1 3.2 1 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF24157 - 0.00019 21.7 0.6 0.47 10.8 0.0 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region SurA_N_3 PF13624.6 ORF24157 - 0.00053 19.8 0.8 0.61 9.9 0.1 2.2 1 1 1 2 2 2 2 SurA N-terminal domain EF-hand_14 PF17959.1 ORF24157 - 0.0019 18.5 0.9 1.1 9.7 0.5 2.8 1 1 1 2 2 2 1 EF-hand domain SurA_N_2 PF13623.6 ORF24157 - 0.0059 16.5 1.4 1.5 8.6 0.2 2.5 1 1 1 2 2 2 2 SurA N-terminal domain FlgD PF03963.14 ORF24157 - 0.0072 16.6 0.0 0.016 15.5 0.0 1.7 2 1 0 2 2 1 1 Flagellar hook capping protein - N-terminal region TerB PF05099.13 ORF24157 - 0.029 14.3 4.3 0.13 12.2 0.1 2.7 1 1 2 3 3 3 0 Tellurite resistance protein TerB MgtE_N PF03448.17 ORF24157 - 0.039 14.6 0.8 0.039 14.6 0.8 2.4 3 0 0 3 3 2 0 MgtE intracellular N domain Toprim_2 PF13155.6 ORF24157 - 0.046 14.1 0.9 2.3 8.7 0.1 2.4 1 1 1 2 2 2 0 Toprim-like DUF1296 PF06972.11 ORF24157 - 0.056 13.6 1.1 0.24 11.6 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1296) SUB1_ProdP9 PF18213.1 ORF24157 - 0.056 13.3 0.3 0.099 12.5 0.3 1.5 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 Dockerin_1 PF00404.18 ORF24157 - 0.058 13.6 0.7 1.9 8.7 0.1 2.5 2 1 1 3 3 3 0 Dockerin type I domain Acetyltransf_11 PF13720.6 ORF24157 - 0.066 13.7 0.8 0.95 10.0 0.1 2.4 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF3008 PF11450.8 ORF24157 - 0.079 13.1 1.4 0.16 12.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknwon function (DUF3008) Adenine_glyco PF03352.13 ORF24157 - 0.095 12.5 0.3 0.22 11.2 0.2 1.6 1 1 1 2 2 2 0 Methyladenine glycosylase UPF0154 PF03672.13 ORF24157 - 0.1 12.7 0.6 14 5.8 0.0 2.7 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0154) DUF21 PF01595.20 ORF24157 - 0.48 10.1 1.2 2.9 7.6 0.5 2.1 2 0 0 2 2 2 0 Cyclin M transmembrane N-terminal domain Gp-FAR-1 PF05823.12 ORF24157 - 0.57 10.5 4.6 1.3 9.4 0.3 2.5 2 1 0 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Peptidase_Mx PF15887.5 ORF23426 - 0.037 13.4 0.0 0.049 13.0 0.0 1.2 1 0 0 1 1 1 0 Putative zinc-binding metallo-peptidase HATPase_c PF02518.26 ORF23286 - 3.9e-13 49.9 0.2 6.2e-13 49.2 0.2 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF23286 - 0.012 15.4 0.0 0.018 14.8 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF23286 - 0.091 12.8 0.3 0.19 11.8 0.3 1.6 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain Piwi PF02171.17 ORF22847 - 2e-27 96.3 0.0 2.3e-27 96.0 0.0 1.0 1 0 0 1 1 1 1 Piwi domain HPP PF04982.13 ORF22219 - 0.0027 17.9 7.7 0.0042 17.2 7.7 1.4 1 0 0 1 1 1 1 HPP family DUF4781 PF16013.5 ORF22219 - 0.16 10.7 0.3 0.17 10.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) DUF1713 PF08213.11 ORF20623 - 0.023 14.6 20.8 0.023 14.6 20.8 1.9 2 0 0 2 2 2 0 Mitochondrial domain of unknown function (DUF1713) PIN_6 PF17146.4 ORF20623 - 0.1 13.1 0.0 0.25 11.9 0.0 1.7 1 1 0 1 1 1 0 PIN domain of ribonuclease DUF3741 PF12552.8 ORF20264 - 0.0017 18.2 0.5 0.055 13.4 0.2 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3741) Orai-1 PF07856.12 ORF19136 - 4.5 6.9 9.3 1 9.0 4.9 1.9 1 1 1 2 2 2 0 Mediator of CRAC channel activity Borrelia_rep PF03183.13 ORF18484 - 0.0081 16.1 4.7 0.0081 16.1 4.7 4.9 5 1 0 5 5 5 1 Borrelia repeat protein DUF5533 PF17685.1 ORF18484 - 0.036 14.5 4.7 0.064 13.6 4.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5533) DUF5082 PF16888.5 ORF151999 - 0.014 15.7 6.4 0.014 15.7 6.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) FDX-ACB PF03147.14 ORF151999 - 0.026 14.9 1.2 0.046 14.1 0.7 1.6 1 1 1 2 2 2 0 Ferredoxin-fold anticodon binding domain Exonuc_VII_L PF02601.15 ORF151999 - 0.041 13.4 8.9 0.05 13.2 8.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Apolipoprotein PF01442.18 ORF151999 - 0.17 11.7 7.5 1.3 8.8 4.2 1.7 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF1640 PF07798.11 ORF151999 - 0.36 10.9 12.6 0.58 10.2 12.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) Fib_alpha PF08702.10 ORF151999 - 0.38 10.9 12.9 0.61 10.3 12.4 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF745 PF05335.13 ORF151999 - 0.89 9.2 5.6 0.8 9.4 4.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 ORF151999 - 1.5 8.9 7.8 1.5 8.8 4.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF151999 - 1.6 9.2 11.0 0.11 12.9 1.3 3.0 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) SlyX PF04102.12 ORF151999 - 2.2 9.0 8.9 2 9.1 4.6 2.7 2 1 1 3 3 3 0 SlyX GRIP PF01465.20 ORF151467 - 0.0029 17.5 0.0 0.0059 16.5 0.0 1.5 1 0 0 1 1 1 1 GRIP domain Borrelia_rep PF03183.13 ORF150566 - 0.0081 16.1 4.7 0.0081 16.1 4.7 4.9 5 1 0 5 5 5 1 Borrelia repeat protein DUF5533 PF17685.1 ORF150566 - 0.036 14.5 4.7 0.064 13.6 4.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5533) WBP-1 PF11669.8 ORF150306 - 0.035 14.7 2.9 0.035 14.7 2.9 2.0 1 1 1 2 2 2 0 WW domain-binding protein 1 RNA_pol_Rpb8 PF03870.15 ORF149455 - 5.5e-31 107.6 1.7 6.9e-31 107.3 1.7 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb8 RNA_pol_RpbG PF16992.5 ORF149455 - 9.6e-07 28.9 1.1 0.00021 21.3 1.1 2.3 1 1 0 1 1 1 1 DNA-directed RNA polymerase, subunit G Lipocalin_4 PF13648.6 ORF149455 - 0.19 12.7 2.6 0.45 11.5 2.6 1.7 1 1 0 1 1 1 0 Lipocalin-like domain DNA_RNApol_7kD PF03604.13 ORF149147 - 0.57 9.9 6.0 1.4 8.7 0.0 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit HPP PF04982.13 ORF144536 - 0.0027 17.9 7.7 0.0042 17.2 7.7 1.4 1 0 0 1 1 1 1 HPP family DUF4781 PF16013.5 ORF144536 - 0.16 10.7 0.3 0.17 10.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) HATPase_c PF02518.26 ORF144487 - 1.6e-11 44.7 0.3 1.2e-10 41.8 0.3 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF144487 - 0.0029 17.6 0.1 0.0044 17.0 0.1 1.5 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 ORF144487 - 0.0093 15.8 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Disintegrin PF00200.23 ORF141945 - 1.2 9.9 10.8 0.17 12.7 1.3 2.4 2 0 0 2 2 2 0 Disintegrin efThoc1 PF11957.8 ORF138756 - 8.3e-15 54.4 3.7 1.2e-14 53.9 3.7 1.3 1 0 0 1 1 1 1 THO complex subunit 1 transcription elongation factor AGS_C PF18134.1 ORF138756 - 0.029 14.4 0.3 0.04 13.9 0.3 1.2 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain Renin_r PF07850.14 ORF138432 - 0.32 11.6 0.1 0.32 11.6 0.1 2.6 2 1 0 2 2 2 0 Renin receptor-like protein Tetraspanin PF00335.20 ORF138432 - 2.2 7.9 17.1 3.5 7.3 15.5 1.8 1 1 1 2 2 2 0 Tetraspanin family DUF1097 PF06496.11 ORF136613 - 1.4e-27 96.6 30.6 1.6e-27 96.4 30.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1097) DUF1072 PF06380.11 ORF136613 - 0.27 11.1 2.3 3.8 7.5 0.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) SNN_transmemb PF09049.10 ORF135891 - 0.08 12.9 1.2 0.16 11.9 1.2 1.4 1 0 0 1 1 1 0 Stannin transmembrane DUF2207 PF09972.9 ORF135891 - 3.7 6.2 4.7 5.7 5.6 4.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Keratin_assoc PF09775.9 ORF135891 - 8.2 6.1 11.6 0.81 9.3 5.9 1.9 1 1 0 2 2 2 0 Keratinocyte-associated protein 2 DUF3364 PF11844.8 ORF134785 - 0.048 13.9 0.2 0.18 12.1 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3364) DUF5521 PF17659.1 ORF134785 - 0.62 7.8 5.6 0.11 10.3 0.7 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5521) COX6A PF02046.15 ORF133702 - 0.16 12.4 0.0 0.26 11.8 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa ATP-synt_C PF00137.21 ORF13255 - 1e-31 109.0 34.9 6.6e-19 68.0 12.7 2.1 2 0 0 2 2 2 2 ATP synthase subunit C Cry1Ac_D5 PF17997.1 ORF13255 - 0.0063 16.4 0.0 0.0075 16.1 0.0 1.1 1 0 0 1 1 1 1 Insecticidal delta-endotoxin CryIA(c) domain 5 TctB PF07331.11 ORF13255 - 2.5 8.4 15.3 7.2 6.9 15.3 1.6 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family DUF4637 PF15470.6 ORF131668 - 0.072 12.8 0.1 0.17 11.6 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF2417 PF10329.9 ORF12777 - 0.1 12.0 11.2 0.14 11.6 11.2 1.3 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Glyco_hydro_65m PF03632.15 ORF127174 - 0.016 14.1 0.0 0.02 13.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 65 central catalytic domain ABATE PF07336.11 ORF127174 - 1.3 9.7 10.8 6.8 7.4 7.3 2.1 1 1 1 2 2 2 0 Putative stress-induced transcription regulator Bac_surface_Ag PF01103.23 ORF122049 - 4.8e-51 174.2 1.7 5.4e-51 174.0 1.7 1.0 1 0 0 1 1 1 1 Surface antigen ShlB PF03865.13 ORF122049 - 0.025 14.0 0.3 0.22 10.9 0.0 2.3 2 1 1 3 3 3 0 Haemolysin secretion/activation protein ShlB/FhaC/HecB CHGN PF05679.16 ORF122049 - 0.15 10.8 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 Chondroitin N-acetylgalactosaminyltransferase Granulin PF00396.18 ORF121755 - 0.13 12.6 1.1 0.13 12.6 1.1 3.2 3 0 0 3 3 3 0 Granulin Opy2 PF09463.10 ORF121755 - 7.2 7.0 10.4 4.4 7.7 1.2 2.7 2 0 0 2 2 2 0 Opy2 protein DAP_epimerase PF01678.19 ORF121177 - 0.18 12.0 0.0 0.28 11.4 0.0 1.3 1 0 0 1 1 1 0 Diaminopimelate epimerase Borrelia_rep PF03183.13 ORF117296 - 0.0081 16.1 4.7 0.0081 16.1 4.7 4.9 5 1 0 5 5 5 1 Borrelia repeat protein DUF5533 PF17685.1 ORF117296 - 0.036 14.5 4.7 0.064 13.6 4.7 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5533) MFS_1 PF07690.16 ORF116759 - 1.1e-09 37.8 5.2 1.2e-09 37.6 5.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF116759 - 1.4e-08 34.0 10.7 1.5e-08 33.9 10.7 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 ORF116759 - 0.0043 15.9 4.9 0.0063 15.4 4.9 1.3 1 0 0 1 1 1 1 MFS_1 like family SRCR_2 PF15494.6 ORF116204 - 0.024 15.2 0.7 0.1 13.1 0.1 2.1 2 0 0 2 2 2 0 Scavenger receptor cysteine-rich domain GRAM PF02893.20 ORF115600 - 1.7e-23 82.6 1.5 2.4e-23 82.2 1.5 1.2 1 0 0 1 1 1 1 GRAM domain Vps36_ESCRT-II PF11605.8 ORF115600 - 0.02 15.1 0.3 0.037 14.2 0.3 1.4 1 0 0 1 1 1 0 Vacuolar protein sorting protein 36 Vps36 DnaJ PF00226.31 ORF114479 - 0.00027 21.0 0.1 0.00066 19.7 0.0 1.6 1 1 1 2 2 2 1 DnaJ domain MRF_C1 PF13887.6 ORF114355 - 0.48 9.6 0.1 0.48 9.6 0.1 2.1 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 Aminotran_4 PF01063.19 ORF114355 - 1.7 8.5 4.9 3.8 7.3 4.9 1.7 1 1 0 1 1 1 0 Amino-transferase class IV Mpp10 PF04006.12 ORF114355 - 7.8 4.8 8.8 10 4.4 8.8 1.1 1 0 0 1 1 1 0 Mpp10 protein PGC7_Stella PF15549.6 ORF114014 - 0.075 13.0 0.2 0.11 12.5 0.2 1.2 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain betaPIX_CC PF16523.5 ORF113381 - 0.013 15.3 4.4 0.021 14.6 0.1 2.6 2 1 1 3 3 3 0 betaPIX coiled coil Seryl_tRNA_N PF02403.22 ORF113381 - 0.064 13.5 3.9 0.049 13.9 0.9 2.0 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Globin PF00042.22 ORF113381 - 0.096 13.3 0.9 1.2 9.8 0.1 2.3 1 1 0 2 2 2 0 Globin PAN_1 PF00024.26 ORF112848 - 2.8e-07 30.4 0.6 5.5e-07 29.5 0.2 1.7 1 1 0 1 1 1 1 PAN domain PAN_4 PF14295.6 ORF112848 - 8.7e-05 22.4 0.5 0.00019 21.2 0.5 1.6 1 0 0 1 1 1 1 PAN domain PAN_2 PF08276.11 ORF112848 - 0.048 13.8 3.0 0.61 10.2 0.3 2.5 2 0 0 2 2 2 0 PAN-like domain Nucleoporin_FG2 PF15967.5 ORF112777 - 0.059 11.9 7.8 0.064 11.8 7.8 1.1 1 0 0 1 1 1 0 Nucleoporin FG repeated region HECT PF00632.25 ORF111581 - 4.6e-48 164.3 0.3 5e-48 164.2 0.3 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) PrkA PF06798.12 ORF111581 - 0.065 12.8 0.1 0.2 11.3 0.0 1.8 2 0 0 2 2 2 0 PrkA serine protein kinase C-terminal domain DUF2681 PF10883.8 ORF111210 - 0.62 10.5 8.0 1 9.8 8.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) RR_TM4-6 PF06459.12 ORF111210 - 3 7.6 15.6 3.3 7.5 15.6 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Vfa1 PF08432.10 ORF111210 - 4.3 7.6 20.7 6 7.2 20.7 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 PrsW-protease PF13367.6 ORF109718 - 1.7e-10 40.7 0.1 2.1e-10 40.4 0.1 1.0 1 0 0 1 1 1 1 PrsW family intramembrane metalloprotease Pox_P21 PF05313.12 ORF109711 - 0.19 11.3 8.0 0.23 11.0 8.0 1.1 1 0 0 1 1 1 0 Poxvirus P21 membrane protein AC_N PF16214.5 ORF109711 - 1.7 7.7 5.6 2.6 7.1 5.6 1.2 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Herpes_LMP1 PF05297.11 ORF109711 - 3.1 6.9 6.0 3.7 6.7 6.0 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Toxin_35 PF10530.9 ORF109584 - 0.037 14.0 2.0 0.037 14.0 2.0 2.8 3 1 0 3 3 3 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold EF-hand_7 PF13499.6 ORF109378 - 4.9e-23 81.4 5.0 3.3e-11 43.5 0.2 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF109378 - 1.5e-22 77.4 9.0 6.6e-08 31.6 0.1 5.3 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF109378 - 1.6e-20 71.2 6.5 2.3e-08 33.3 0.1 4.9 4 1 0 4 4 4 3 EF-hand domain EF-hand_8 PF13833.6 ORF109378 - 1.6e-16 59.9 10.6 6.5e-12 45.1 0.8 3.6 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF109378 - 1.7e-12 47.5 0.1 3.6e-07 30.4 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF109378 - 4.9e-08 32.1 19.2 0.0012 18.2 1.4 5.8 6 1 0 6 6 6 2 EF hand EF-hand_14 PF17959.1 ORF109378 - 0.00026 21.3 0.9 0.18 12.2 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF109378 - 0.00028 20.8 4.7 0.067 13.1 0.3 3.0 1 1 2 3 3 3 1 Cytoskeletal-regulatory complex EF hand SurA_N_3 PF13624.6 ORF109378 - 0.0039 17.0 3.5 0.091 12.5 0.1 2.1 2 0 0 2 2 2 1 SurA N-terminal domain DUF3008 PF11450.8 ORF109378 - 0.0067 16.6 0.3 0.0067 16.6 0.3 2.7 3 0 0 3 3 3 1 Protein of unknwon function (DUF3008) SurA_N_2 PF13623.6 ORF109378 - 0.011 15.6 1.0 0.18 11.7 0.1 2.3 2 0 0 2 2 2 0 SurA N-terminal domain Dockerin_1 PF00404.18 ORF109378 - 0.026 14.7 0.0 0.092 12.9 0.0 1.9 2 0 0 2 2 2 0 Dockerin type I domain DUF3349 PF11829.8 ORF109378 - 0.037 14.8 1.2 14 6.6 0.1 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF3349) FlgD PF03963.14 ORF109378 - 0.085 13.2 0.3 0.16 12.3 0.1 1.7 2 0 0 2 2 2 0 Flagellar hook capping protein - N-terminal region DUF1840 PF08895.11 ORF109378 - 0.091 13.1 2.6 0.42 11.0 0.3 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF1840) Pox_EPC_I2-L1 PF12575.8 ORF109378 - 0.099 12.9 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 Malate_DH PF12434.8 ORF109378 - 0.21 11.7 1.6 1.2 9.2 0.5 2.7 2 0 0 2 2 2 0 Malate dehydrogenase enzyme SPARC_Ca_bdg PF10591.9 ORF109378 - 0.33 11.3 2.1 6.4 7.1 0.5 2.5 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF109378 - 0.34 10.8 4.8 0.83 9.6 1.1 2.8 2 1 1 3 3 3 0 EF hand SRI PF08236.11 ORF109378 - 0.35 11.1 4.6 0.97 9.7 0.1 3.1 3 1 1 4 4 4 0 SRI (Set2 Rpb1 interacting) domain RNA_pol_Rpb4 PF03874.16 ORF109378 - 0.44 10.9 3.6 3.1 8.1 3.6 2.4 1 1 0 1 1 1 0 RNA polymerase Rpb4 DUF1456 PF07308.13 ORF109378 - 2.2 8.7 5.4 6.4 7.2 0.4 2.8 3 1 0 3 3 2 0 Protein of unknown function (DUF1456) Borrelia_rep PF03183.13 ORF109147 - 0.0081 16.1 4.7 0.0081 16.1 4.7 3.8 4 1 0 4 4 4 1 Borrelia repeat protein CDH-cyt PF16010.5 ORF109095 - 0.013 15.2 1.8 0.017 14.8 1.8 1.1 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase DUF218 PF02698.17 ORF105298 - 0.077 13.0 0.0 0.097 12.7 0.0 1.2 1 0 0 1 1 1 0 DUF218 domain 2OG-FeII_Oxy_5 PF13759.6 ORF104469 - 0.12 12.7 0.5 0.24 11.9 0.5 1.5 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase DUF4486 PF14858.6 ORF103853 - 0.047 12.2 0.2 0.053 12.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4486) NP1-WLL PF11733.8 ORF102112 - 1.6 8.5 8.6 1.2 8.9 7.4 1.3 1 1 0 1 1 1 0 Non-capsid protein NP1 Nop14 PF04147.12 ORF101034 - 0.37 8.9 24.3 0.38 8.9 24.3 1.0 1 0 0 1 1 1 0 Nop14-like family DUF3381 PF11861.8 ORF101034 - 0.48 10.2 15.9 0.7 9.7 15.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) CDC45 PF02724.14 ORF101034 - 0.75 8.0 16.4 0.76 8.0 16.4 1.1 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 ORF101034 - 1.2 8.9 14.0 1.4 8.7 14.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Sporozoite_P67 PF05642.11 ORF101034 - 1.6 6.7 13.4 1.8 6.6 13.4 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF4746 PF15928.5 ORF101034 - 1.9 7.9 15.2 2.1 7.7 15.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) SDA1 PF05285.12 ORF101034 - 3.4 7.0 23.7 3.5 7.0 23.7 1.1 1 0 0 1 1 1 0 SDA1 Tim54 PF11711.8 ORF101034 - 3.8 6.2 12.3 5.2 5.7 12.3 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 RPN2_C PF18004.1 ORF101034 - 4 7.3 14.2 6.2 6.7 14.2 1.3 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain DUF913 PF06025.12 ORF101034 - 4.8 6.0 9.5 5.5 5.9 9.5 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) RNA_pol_Rpc4 PF05132.14 ORF101034 - 5.4 7.4 10.5 7.4 7.0 10.5 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 DNA_pol_phi PF04931.13 ORF101034 - 6 4.8 29.3 7.4 4.5 29.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi NPR3 PF03666.13 ORF101034 - 7.1 5.3 12.9 8.2 5.1 12.9 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF148 PF02520.17 ORF100864 - 0.014 15.5 0.7 1.9 8.6 0.3 2.4 1 1 1 2 2 2 0 Domain of unknown function DUF148 IcmF_C PF06744.12 ORF100864 - 0.066 12.8 0.1 0.25 11.0 0.1 1.8 1 1 0 1 1 1 0 Type VI secretion protein IcmF C-terminal TRP PF06011.12 NODE_41718_length_490_cov_63.413187_g34144_i0reverse_frame_1 - 0.012 14.4 1.2 0.011 14.6 1.2 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Binary_toxB PF03495.14 NODE_41718_length_490_cov_63.413187_g34144_i0reverse_frame_1 - 0.068 13.4 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain Joubert PF15392.6 NODE_41717_length_490_cov_67.859341_g34143_i0reverse_frame_1 - 0.89 9.2 2.2 1.1 9.0 2.2 1.2 1 0 0 1 1 1 0 Joubert syndrome-associated Ribosomal_L34e PF01199.18 NODE_41717_length_490_cov_67.859341_g34143_i0forward_frame_1 - 1.2e-40 137.7 7.7 1.2e-40 137.7 7.7 1.9 2 0 0 2 2 2 1 Ribosomal protein L34e DUF1428 PF07237.11 NODE_41717_length_490_cov_67.859341_g34143_i0forward_frame_1 - 0.053 13.8 0.0 0.089 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1428) Cas_Csn2 PF09711.10 NODE_41678_length_491_cov_1.603070_g34108_i0reverse_frame_1 - 0.015 15.0 0.9 0.021 14.5 0.7 1.4 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_Csn2) Pyr_redox_2 PF07992.14 NODE_41675_length_491_cov_2.296053_g34105_i0reverse_frame_1 - 1.4e-07 31.0 0.0 1.7e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 NODE_41675_length_491_cov_2.296053_g34105_i0reverse_frame_1 - 0.067 13.4 0.0 0.19 12.0 0.0 1.7 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Abhydrolase_1 PF00561.20 NODE_41675_length_491_cov_2.296053_g34105_i0reverse_frame_1 - 0.11 12.1 0.3 0.13 11.9 0.3 1.4 1 1 0 1 1 1 0 alpha/beta hydrolase fold DUF2457 PF10446.9 NODE_41674_length_491_cov_2.307018_g34104_i0reverse_frame_1 - 0.015 14.5 3.5 0.017 14.3 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) YopE_N PF09020.10 NODE_41674_length_491_cov_2.307018_g34104_i0reverse_frame_1 - 0.16 12.2 1.2 0.2 11.9 0.7 1.4 1 1 0 1 1 1 0 YopE, N terminal RdgC PF04381.12 NODE_41673_length_491_cov_2.675439_g34103_i0forward_frame_1 - 1.8e-66 224.5 1.7 2e-66 224.3 1.7 1.0 1 0 0 1 1 1 1 Putative exonuclease, RdgC M PF02370.16 NODE_41673_length_491_cov_2.675439_g34103_i0forward_frame_1 - 0.13 12.9 1.9 0.13 12.9 1.9 3.7 4 1 0 4 4 4 0 M protein repeat SRPRB PF09439.10 NODE_41673_length_491_cov_2.675439_g34103_i0forward_frame_1 - 0.24 10.8 2.7 0.35 10.3 2.1 1.5 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit DUF5332 PF17266.2 NODE_41671_length_491_cov_3.989035_g34101_i0reverse_frame_1 - 0.072 12.8 0.4 0.14 11.9 0.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5332) LptC PF06835.13 NODE_41671_length_491_cov_3.989035_g34101_i0forward_frame_1 - 0.065 12.8 0.0 0.084 12.4 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide-assembly, LptC-related MtrA PF04208.14 NODE_41671_length_491_cov_3.989035_g34101_i0forward_frame_1 - 0.081 12.6 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit A XPA_C PF05181.12 NODE_41668_length_491_cov_42.070175_g34098_i0reverse_frame_1 - 0.22 11.5 0.9 0.59 10.1 0.0 2.2 3 0 0 3 3 3 0 XPA protein C-terminus MORN PF02493.20 NODE_41659_length_491_cov_76.991228_g34089_i0forward_frame_1 - 6.5e-06 25.7 8.6 0.0032 17.3 0.4 4.2 4 1 0 4 4 4 3 MORN repeat TMEM223 PF14640.6 NODE_41622_length_492_cov_2.218818_g34055_i0forward_frame_1 - 0.0048 17.1 1.4 0.0089 16.2 1.4 1.4 1 1 0 1 1 1 1 Transmembrane protein 223 RabGAP-TBC PF00566.18 NODE_41616_length_492_cov_2.634573_g34049_i0reverse_frame_1 - 8.6e-13 48.4 0.6 2e-12 47.2 0.3 1.6 2 0 0 2 2 2 1 Rab-GTPase-TBC domain Tachystatin_B PF11478.8 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_1 - 0.51 10.3 2.3 27 4.8 0.0 2.9 3 0 0 3 3 3 0 Antimicrobial chitin binding protein tachystatin B DUF5497 PF17601.2 NODE_41593_length_492_cov_62.485777_g34026_i0reverse_frame_1 - 0.071 13.4 1.3 0.44 10.9 0.1 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5497) BTAD PF03704.17 NODE_41571_length_492_cov_148.347921_g34004_i0forward_frame_1 - 0.094 13.1 2.0 0.13 12.7 2.0 1.2 1 0 0 1 1 1 0 Bacterial transcriptional activator domain NinF PF05810.12 NODE_41569_length_492_cov_168.393873_g34002_i0reverse_frame_1 - 0.0059 16.4 0.0 0.01 15.7 0.0 1.4 1 0 0 1 1 1 1 NinF protein RCC1_2 PF13540.6 NODE_41569_length_492_cov_168.393873_g34002_i0forward_frame_1 - 2.1e-05 24.2 10.4 0.37 10.7 0.1 3.7 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat CbtB PF09489.10 NODE_41550_length_493_cov_2.061135_g33987_i0forward_frame_2 - 0.061 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtB) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks151.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks151.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks151.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks151.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:09:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CarboxypepD_reg PF13620.6 NODE_41545_length_493_cov_2.794760_g33982_i0forward_frame_2 - 0.00093 19.4 0.0 0.037 14.3 0.0 2.2 2 0 0 2 2 2 1 Carboxypeptidase regulatory-like domain Ycf4 PF02392.16 NODE_41545_length_493_cov_2.794760_g33982_i0forward_frame_2 - 0.026 14.1 0.0 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 Ycf4 DUF2800 PF10926.8 NODE_41542_length_493_cov_3.323144_g33979_i0reverse_frame_2 - 0.013 14.8 0.3 0.022 14.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2800) Sld7_N PF18636.1 NODE_41540_length_493_cov_3.681223_g33977_i0reverse_frame_2 - 0.035 14.5 0.4 0.064 13.6 0.1 1.6 2 0 0 2 2 2 0 Mitochondrial morphogenesis protein SLD7 N-terminal domain TSNAXIP1_N PF15739.5 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 0.01 16.2 5.7 0.01 16.2 5.7 1.7 2 0 0 2 2 2 0 Translin-associated factor X-interacting N-terminus HAUS-augmin3 PF14932.6 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 0.053 13.1 9.3 0.07 12.7 9.3 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 GIT_CC PF16559.5 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 0.07 13.0 3.4 0.56 10.1 1.1 2.6 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor FAM76 PF16046.5 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 1.1 8.6 10.9 1.7 7.9 10.9 1.3 1 1 0 1 1 1 0 FAM76 protein NRBF2 PF08961.10 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 1.2 8.6 15.4 0.35 10.4 7.1 2.2 1 1 1 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator Mt_ATP-synt_B PF05405.14 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 1.8 8.2 9.2 0.24 11.0 3.7 2.0 2 0 0 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF4407 PF14362.6 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 2.3 7.5 6.3 2.7 7.3 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-C4H2 PF10146.9 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 2.4 8.4 14.3 1.2 9.4 11.7 1.7 1 1 1 2 2 2 0 Zinc finger-containing protein PRKG1_interact PF15898.5 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 5.7 7.9 18.6 0.79 10.7 5.1 3.0 2 1 1 3 3 3 0 cGMP-dependent protein kinase interacting domain CENP-H PF05837.12 NODE_41536_length_493_cov_46.552402_g33973_i0reverse_frame_3 - 6.4 7.2 13.0 8.1 6.9 3.4 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) LON_substr_bdg PF02190.16 NODE_41531_length_493_cov_87.131004_g33968_i0reverse_frame_3 - 0.0033 17.3 0.0 0.0045 16.9 0.0 1.2 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain Metallothio_Euk PF12749.7 NODE_41527_length_493_cov_112.565502_g33964_i0reverse_frame_2 - 0.17 12.0 9.6 3.8 7.7 6.8 3.0 2 1 0 2 2 2 0 Eukaryotic metallothionein Peptidase_S49_N PF08496.10 NODE_41523_length_493_cov_147.978166_g33960_i0forward_frame_3 - 2.5 8.1 5.9 10 6.1 0.1 2.1 1 1 1 2 2 2 0 Peptidase family S49 N-terminal STAG PF08514.11 NODE_41511_length_493_cov_356.572052_g33948_i0reverse_frame_3 - 0.0081 16.1 4.2 0.015 15.2 4.2 1.4 1 0 0 1 1 1 1 STAG domain 4HBT PF03061.22 NODE_41511_length_493_cov_356.572052_g33948_i0reverse_frame_2 - 2.8e-07 30.8 0.0 4.1e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily CobU PF02283.16 NODE_41511_length_493_cov_356.572052_g33948_i0reverse_frame_2 - 0.088 12.4 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase Radical_SAM PF04055.21 NODE_41496_length_494_cov_1.671024_g33938_i0forward_frame_2 - 3.2e-07 30.9 0.0 4.5e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Sec15 PF04091.12 NODE_41493_length_494_cov_2.193900_g33935_i0reverse_frame_3 - 0.38 10.1 8.1 1.8 7.9 0.5 2.0 1 1 1 2 2 2 0 Exocyst complex subunit Sec15-like YvfG PF09628.10 NODE_41485_length_494_cov_2.947712_g33927_i0reverse_frame_3 - 0.082 13.3 0.0 0.14 12.5 0.0 1.4 1 0 0 1 1 1 0 YvfG protein DUF29 PF01724.16 NODE_41485_length_494_cov_2.947712_g33927_i0forward_frame_2 - 0.025 14.8 0.4 0.047 13.9 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function DUF29 Arc_PepC_II PF06847.11 NODE_41485_length_494_cov_2.947712_g33927_i0forward_frame_2 - 0.057 13.9 4.1 0.14 12.7 1.2 2.1 1 1 1 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II HIP1_clath_bdg PF16515.5 NODE_41485_length_494_cov_2.947712_g33927_i0forward_frame_2 - 0.87 10.2 5.5 9.9 6.9 2.0 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 FAM184 PF15665.5 NODE_41485_length_494_cov_2.947712_g33927_i0forward_frame_2 - 1.6 8.4 10.1 4.2 7.1 0.9 2.0 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B TMEM223 PF14640.6 NODE_41483_length_494_cov_3.572985_g33925_i0forward_frame_3 - 0.075 13.2 2.4 0.11 12.7 2.4 1.2 1 0 0 1 1 1 0 Transmembrane protein 223 Lyase_1 PF00206.20 NODE_41483_length_494_cov_3.572985_g33925_i0forward_frame_2 - 2e-59 201.5 0.1 2.2e-59 201.4 0.1 1.0 1 0 0 1 1 1 1 Lyase Peptidase_M26_C PF07580.14 NODE_41483_length_494_cov_3.572985_g33925_i0forward_frame_2 - 0.25 9.8 0.0 0.32 9.4 0.0 1.1 1 0 0 1 1 1 0 M26 IgA1-specific Metallo-endopeptidase C-terminal region PseudoU_synth_2 PF00849.22 NODE_41482_length_494_cov_3.956427_g33924_i0reverse_frame_2 - 5.2e-23 81.9 0.0 6.3e-23 81.6 0.0 1.0 1 0 0 1 1 1 1 RNA pseudouridylate synthase Mito_fiss_reg PF05308.11 NODE_41473_length_494_cov_62.355120_g33915_i0reverse_frame_3 - 0.37 10.8 4.2 0.51 10.4 4.2 1.3 1 1 0 1 1 1 0 Mitochondrial fission regulator LRRCT PF01463.24 NODE_41466_length_494_cov_117.156863_g33908_i0reverse_frame_3 - 0.13 12.8 1.2 11 6.8 0.1 3.0 2 0 0 2 2 2 0 Leucine rich repeat C-terminal domain zf-RanBP PF00641.18 NODE_41466_length_494_cov_117.156863_g33908_i0forward_frame_2 - 1.1e-05 24.6 0.9 2.5e-05 23.5 0.9 1.6 1 1 0 1 1 1 1 Zn-finger in Ran binding protein and others Cofilin_ADF PF00241.20 NODE_41463_length_494_cov_153.405229_g33905_i0reverse_frame_2 - 0.03 14.1 0.0 0.28 11.0 0.0 2.0 2 0 0 2 2 2 0 Cofilin/tropomyosin-type actin-binding protein PAN_2 PF08276.11 NODE_41463_length_494_cov_153.405229_g33905_i0forward_frame_3 - 0.46 10.6 7.3 0.8 9.9 7.3 1.5 1 0 0 1 1 1 0 PAN-like domain DUF4680 PF15730.5 NODE_41451_length_494_cov_1310.442266_g33893_i0forward_frame_2 - 0.11 12.8 1.2 0.2 12.0 1.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4680) Spc7 PF08317.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 8.3e-06 24.9 16.0 8.3e-06 24.9 16.0 2.0 1 1 1 2 2 2 1 Spc7 kinetochore protein DUF745 PF05335.13 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 8.7e-06 25.6 13.0 1.1e-05 25.3 13.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF745) FliJ PF02050.16 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.0026 18.0 2.4 1.1 9.4 1.0 2.2 1 1 1 2 2 2 2 Flagellar FliJ protein OEP PF02321.18 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.0034 17.2 1.1 0.0034 17.2 1.1 2.1 1 1 2 3 3 3 2 Outer membrane efflux protein APG17 PF04108.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.0051 16.0 12.7 0.0064 15.7 12.7 1.2 1 0 0 1 1 1 1 Autophagy protein Apg17 TPR_MLP1_2 PF07926.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.0088 16.1 25.2 0.0099 15.9 5.2 3.0 1 1 2 3 3 3 2 TPR/MLP1/MLP2-like protein ATG16 PF08614.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.014 15.7 24.2 0.017 15.4 24.2 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF812 PF05667.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.017 14.0 19.8 0.021 13.7 19.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF5082 PF16888.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.019 15.3 17.7 0.34 11.2 9.7 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) Exonuc_VII_L PF02601.15 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.035 13.7 12.4 0.043 13.4 12.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit TarH PF02203.15 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.073 13.0 9.6 0.29 11.0 6.5 2.1 1 1 1 2 2 2 0 Tar ligand binding domain homologue HIP1_clath_bdg PF16515.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.081 13.5 15.8 0.73 10.5 8.8 2.4 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 GAS PF13851.6 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.11 11.8 21.4 0.2 11.0 15.4 2.2 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Fez1 PF06818.15 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.12 12.8 21.9 0.96 9.9 8.7 2.0 1 1 1 2 2 2 0 Fez1 WEMBL PF05701.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.13 11.0 19.1 0.27 9.9 19.1 1.5 1 1 0 1 1 1 0 Weak chloroplast movement under blue light PRKG1_interact PF15898.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.15 13.0 19.3 0.046 14.6 13.4 2.3 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DUF3584 PF12128.8 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.17 9.4 17.6 0.14 9.6 16.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) HrpB7 PF09486.10 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.3 11.5 7.0 0.53 10.7 7.0 1.4 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) DUF3552 PF12072.8 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.35 10.2 19.3 1.5 8.2 12.2 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) PspA_IM30 PF04012.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.55 9.8 14.1 0.42 10.2 8.7 2.4 1 1 1 2 2 2 0 PspA/IM30 family DUF4200 PF13863.6 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.59 10.5 17.9 0.27 11.6 12.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) APG6_N PF17675.1 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.89 10.1 23.3 9.2 6.8 23.3 2.0 1 1 0 1 1 1 0 Apg6 coiled-coil region Sec8_exocyst PF04048.14 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 0.98 9.3 16.5 1.7 8.5 10.6 3.0 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain DUF3450 PF11932.8 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 1.1 8.5 15.6 1.5 8.1 10.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) ZapB PF06005.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 1.3 9.5 19.5 2.6 8.5 7.9 3.2 1 1 2 3 3 3 0 Cell division protein ZapB Flagellin_C PF00700.21 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 2 8.9 11.4 2.5 8.5 1.2 2.9 1 1 1 2 2 2 0 Bacterial flagellin C-terminal helical region DUF2203 PF09969.9 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 2.1 9.1 9.0 1.1 10.0 0.8 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 2.6 7.0 18.3 5.2 6.1 18.3 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Phage_holin_7_1 PF16081.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 2.7 8.2 4.8 7.1 6.8 2.0 2.1 1 1 1 2 2 2 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family TBCA PF02970.16 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 3.2 8.1 17.2 3.5 8.0 5.1 3.0 1 1 2 3 3 3 0 Tubulin binding cofactor A JIP_LZII PF16471.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 3.8 7.8 20.3 0.16 12.2 9.4 2.7 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II EMP24_GP25L PF01105.24 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 3.9 7.4 11.5 9.2 6.2 11.5 1.7 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Med2 PF11214.8 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 4.2 7.6 18.4 3.2 7.9 1.4 3.4 1 1 2 3 3 3 0 Mediator complex subunit 2 Prominin PF05478.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.2 4.9 18.6 6 4.7 18.6 1.0 1 0 0 1 1 1 0 Prominin SecD-TM1 PF13721.6 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.5 7.5 8.6 3 8.3 1.8 2.8 1 1 2 3 3 3 0 SecD export protein N-terminal TM region DUF1664 PF07889.12 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.8 7.0 12.3 59 3.7 12.3 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) KxDL PF10241.9 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.9 7.3 18.6 0.44 10.9 6.0 3.1 1 1 2 3 3 3 0 Uncharacterized conserved protein DUF948 PF06103.11 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 5.9 7.2 16.6 1.6 9.0 8.4 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) LMBR1 PF04791.16 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 6.4 5.6 14.9 7.4 5.3 14.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DivIC PF04977.15 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 7.5 6.4 16.4 3.5e+02 1.0 0.1 3.2 2 1 0 2 2 2 0 Septum formation initiator KELK PF15796.5 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 8.2 7.0 16.2 3.4 8.2 10.9 2.2 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF16 PF01519.16 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 8.4 6.9 17.1 5.6 7.5 7.7 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 YabA PF06156.13 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 9.3 7.0 14.6 2 9.1 6.8 2.3 1 1 1 2 2 2 0 Initiation control protein YabA Leu_zip PF15294.6 NODE_41446_length_495_cov_1.697826_g33890_i0reverse_frame_2 - 9.9 5.6 27.9 5.5 6.4 5.0 2.0 1 1 1 2 2 2 0 Leucine zipper DNA_methylase PF00145.17 NODE_41444_length_495_cov_2.265217_g33888_i0forward_frame_3 - 2.5e-05 23.8 0.0 3.3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Curlin_rpt PF07012.12 NODE_41442_length_495_cov_2.606522_g33886_i0forward_frame_3 - 5.9e-24 83.8 35.3 2.1e-09 37.2 0.1 5.1 2 2 3 5 5 5 5 Curlin associated repeat CheD PF03975.13 NODE_41442_length_495_cov_2.606522_g33886_i0forward_frame_3 - 0.14 12.2 0.8 0.93 9.6 0.2 2.1 2 0 0 2 2 2 0 CheD chemotactic sensory transduction BRI3BP PF14965.6 NODE_41438_length_495_cov_4.282609_g33882_i0reverse_frame_3 - 0.057 12.9 0.7 2.6 7.5 0.2 2.1 2 0 0 2 2 2 0 Negative regulator of p53/TP53 TMEM70 PF06979.12 NODE_41438_length_495_cov_4.282609_g33882_i0forward_frame_2 - 0.081 13.3 2.6 0.13 12.7 2.4 1.4 1 1 0 1 1 1 0 Assembly, mitochondrial proton-transport ATP synth complex A2M PF00207.22 NODE_41436_length_495_cov_4.358696_g33880_i0forward_frame_3 - 4e-08 33.0 0.0 6.6e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Alpha-2-macroglobulin family FixG_C PF11614.8 NODE_41436_length_495_cov_4.358696_g33880_i0forward_frame_3 - 0.054 13.7 0.0 0.077 13.2 0.0 1.2 1 0 0 1 1 1 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF2744 PF10910.8 NODE_41436_length_495_cov_4.358696_g33880_i0forward_frame_3 - 0.066 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2744) GRAB PF10375.9 NODE_41432_length_495_cov_39.782609_g33877_i0reverse_frame_2 - 0.14 12.0 0.7 0.36 10.8 0.7 1.7 1 0 0 1 1 1 0 GRIP-related Arf-binding domain Whirly PF08536.11 NODE_41429_length_495_cov_65.180435_g33874_i0forward_frame_2 - 0.17 11.7 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Whirly transcription factor PKcGMP_CC PF16808.5 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 0.018 14.9 2.7 0.018 14.9 2.7 2.6 2 1 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Aida_N PF08910.10 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 0.089 13.2 5.8 0.084 13.3 2.9 2.0 1 1 0 2 2 2 0 Aida N-terminus Holin_BhlA PF10960.8 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 0.38 10.7 3.9 0.48 10.4 0.6 2.3 2 0 0 2 2 2 0 BhlA holin family DUF1664 PF07889.12 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 0.71 9.9 4.5 0.93 9.5 4.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) TEX13 PF15186.6 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 1.2 8.8 7.0 2.9 7.6 6.2 1.9 1 1 1 2 2 2 0 Testis-expressed sequence 13 protein family HIP1_clath_bdg PF16515.5 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 1.8 9.2 10.9 2.4 8.8 8.9 1.9 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF724 PF05266.14 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 2.2 8.1 9.1 3.1 7.6 9.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Med9 PF07544.13 NODE_41427_length_495_cov_74.356522_g33872_i0reverse_frame_2 - 6.9 6.8 12.5 2.5 8.3 7.1 2.7 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Endotoxin_N PF03945.14 NODE_41423_length_495_cov_83.258696_g33868_i0reverse_frame_2 - 0.1 12.3 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain Toxin-deaminase PF14424.6 NODE_41423_length_495_cov_83.258696_g33868_i0forward_frame_3 - 3.6e-06 27.1 0.0 4.8e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases dCMP_cyt_deam_1 PF00383.23 NODE_41423_length_495_cov_83.258696_g33868_i0forward_frame_3 - 0.00027 20.8 0.0 0.00046 20.0 0.0 1.4 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region NAD1 PF18778.1 NODE_41423_length_495_cov_83.258696_g33868_i0forward_frame_3 - 0.00039 20.6 0.0 0.00048 20.3 0.0 1.1 1 0 0 1 1 1 1 Novel AID APOBEC clade 1 SNAD4 PF18750.1 NODE_41423_length_495_cov_83.258696_g33868_i0forward_frame_3 - 0.0015 18.7 0.0 0.0021 18.2 0.0 1.2 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC3 PF18771.1 NODE_41423_length_495_cov_83.258696_g33868_i0forward_frame_3 - 0.009 16.1 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 1 APOBEC3 APOBEC2 PF18772.1 NODE_41423_length_495_cov_83.258696_g33868_i0forward_frame_3 - 0.0092 16.0 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 1 APOBEC2 NAD2 PF18782.1 NODE_41423_length_495_cov_83.258696_g33868_i0forward_frame_3 - 0.042 13.9 0.0 0.054 13.6 0.0 1.1 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 DmpG_comm PF07836.11 NODE_41421_length_495_cov_90.319565_g33866_i0forward_frame_3 - 0.23 11.0 0.1 0.41 10.2 0.1 1.3 1 0 0 1 1 1 0 DmpG-like communication domain LapA_dom PF06305.11 NODE_41421_length_495_cov_90.319565_g33866_i0forward_frame_2 - 0.14 12.0 0.6 0.25 11.2 0.6 1.5 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Methyltransf_24 PF13578.6 NODE_41418_length_495_cov_99.641304_g33863_i0forward_frame_2 - 1.1e-11 45.7 0.0 1.7e-11 45.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TylF PF05711.11 NODE_41418_length_495_cov_99.641304_g33863_i0forward_frame_2 - 0.028 13.7 0.0 0.034 13.4 0.0 1.1 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) PITH PF06201.13 NODE_41403_length_495_cov_236.450000_g33849_i0reverse_frame_3 - 1.9e-15 57.4 0.0 2.8e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 PITH domain COPI_C PF06957.11 NODE_41402_length_495_cov_386.365217_g33848_i0forward_frame_3 - 4.3e-10 38.9 1.1 6.6e-10 38.3 1.1 1.3 1 1 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus zf-CRD PF17979.1 NODE_41402_length_495_cov_386.365217_g33848_i0forward_frame_3 - 0.047 13.8 4.4 0.068 13.3 4.4 1.2 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions Ribosomal_L11_N PF03946.14 ORF990 - 2.4e-17 62.5 1.2 4.3e-17 61.7 1.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF990 - 2.2e-15 56.9 0.1 3.7e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain DNTTIP1_dimer PF18192.1 ORF98417 - 0.057 13.8 0.2 7.9 6.9 0.0 3.3 2 1 1 3 3 3 0 DNTTIP1 dimerisation domain Glyoxalase_5 PF14696.6 ORF97787 - 0.0056 16.9 0.0 0.0082 16.3 0.0 1.3 1 0 0 1 1 1 1 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal E3_UbLigase_RBR PF18091.1 ORF97734 - 0.036 14.2 0.8 0.055 13.6 0.8 1.4 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain KAsynt_C_assoc PF16197.5 ORF95989 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF95989 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF95989 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family Syd PF07348.12 ORF95295 - 0.19 11.4 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 Syd protein (SUKH-2) bZIP_1 PF00170.21 ORF94864 - 0.0077 16.3 0.6 0.015 15.3 0.6 1.5 1 0 0 1 1 1 1 bZIP transcription factor APC_N_CC PF16689.5 ORF94864 - 0.029 14.4 1.1 0.069 13.2 1.1 1.6 1 0 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain End3 PF12761.7 ORF94864 - 0.041 14.0 0.1 0.052 13.7 0.1 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 YabA PF06156.13 ORF94864 - 0.07 13.8 0.1 0.11 13.1 0.1 1.3 1 0 0 1 1 1 0 Initiation control protein YabA JIP_LZII PF16471.5 ORF94864 - 0.098 12.8 1.8 0.39 10.9 0.8 2.0 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II ZapB PF06005.12 ORF94864 - 0.26 11.8 3.8 0.39 11.2 3.0 1.8 2 1 0 2 2 2 0 Cell division protein ZapB ATP-synt_C PF00137.21 ORF92245 - 3.6e-17 62.5 6.8 3.6e-17 62.5 6.8 2.0 2 0 0 2 2 2 1 ATP synthase subunit C Abp2 PF09441.10 ORF88989 - 0.24 11.5 0.0 0.33 11.0 0.0 1.2 1 0 0 1 1 1 0 ARS binding protein 2 Ago_PAZ PF18309.1 ORF87483 - 0.11 13.2 2.7 0.79 10.4 0.4 2.3 2 0 0 2 2 2 0 Argonaute PAZ domain DUF2116 PF09889.9 ORF87133 - 0.094 12.7 0.1 0.25 11.4 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) MM_CoA_mutase PF01642.22 ORF85867 - 0.11 11.0 3.1 0.14 10.7 3.1 1.1 1 0 0 1 1 1 0 Methylmalonyl-CoA mutase ALMT PF11744.8 ORF85867 - 3 6.6 6.9 3.2 6.5 6.9 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF5350 PF17299.2 ORF85867 - 3.7 8.1 6.1 2.2 8.8 0.5 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5350) Myb_DNA-binding PF00249.31 ORF83273 - 0.018 15.3 0.0 0.031 14.5 0.0 1.4 1 0 0 1 1 1 0 Myb-like DNA-binding domain Patched PF02460.18 ORF83246 - 0.033 12.3 0.0 0.037 12.1 0.0 1.0 1 0 0 1 1 1 0 Patched family Acetyltransf_1 PF00583.25 ORF81891 - 2.4e-08 34.2 0.0 2.8e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF81891 - 5.7e-08 32.8 0.0 6.6e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF81891 - 0.0058 17.0 0.0 0.01 16.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF81891 - 0.036 14.7 0.0 0.043 14.5 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF81891 - 0.11 12.5 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 FR47-like protein MFS_1 PF07690.16 ORF81 - 2.1e-11 43.4 16.1 2.5e-11 43.1 16.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily SLATT_5 PF18160.1 ORF81 - 0.59 9.4 5.2 0.15 11.4 1.1 1.9 1 1 2 3 3 3 0 SMODS and SLOG-associating 2TM effector domain family 5 EST1 PF10374.9 ORF78447 - 0.073 13.7 3.3 0.11 13.2 3.3 1.2 1 0 0 1 1 1 0 Telomerase activating protein Est1 XRN1_D2_D3 PF18334.1 ORF78447 - 0.11 12.8 3.7 3.9 7.8 0.2 2.4 2 0 0 2 2 2 0 Exoribonuclease Xrn1 D2/D3 domain SRP14 PF02290.15 ORF78447 - 0.18 12.2 4.1 0.13 12.6 1.2 2.2 1 1 1 2 2 2 0 Signal recognition particle 14kD protein TackOD1 PF18551.1 ORF77721 - 0.15 11.7 5.7 1.3 8.7 0.5 2.1 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 zf-AN1 PF01428.16 ORF77721 - 0.43 10.8 6.7 3.5 7.9 0.6 2.7 2 0 0 2 2 2 0 AN1-like Zinc finger Cu-oxidase_2 PF07731.14 ORF77243 - 0.11 12.2 0.8 8.5 6.1 0.2 2.2 2 0 0 2 2 2 0 Multicopper oxidase YbbR PF07949.12 ORF75658 - 0.015 15.7 0.6 0.043 14.2 0.6 1.9 1 0 0 1 1 1 0 YbbR-like protein SlyX PF04102.12 ORF75658 - 0.073 13.7 7.3 0.53 10.9 0.5 2.4 2 0 0 2 2 2 0 SlyX DUF5082 PF16888.5 ORF75658 - 0.11 12.8 16.7 0.43 10.9 6.9 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) MscS_porin PF12795.7 ORF75658 - 0.13 11.8 12.3 1.9 8.0 12.3 2.1 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain HR1 PF02185.16 ORF75658 - 0.15 12.2 9.4 0.28 11.3 0.3 3.1 2 1 1 3 3 3 0 Hr1 repeat XhlA PF10779.9 ORF75658 - 1.1 9.6 19.8 1.7 8.9 3.2 3.1 2 1 2 4 4 4 0 Haemolysin XhlA FlxA PF14282.6 ORF75658 - 1.6 8.7 19.0 5.5 7.0 0.5 3.0 2 1 0 2 2 2 0 FlxA-like protein ubiquitin PF00240.23 ORF74819 - 1.4e-08 34.4 0.0 2.1e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Ribosomal_S14 PF00253.21 ORF74819 - 6.1e-06 25.9 0.7 1.2e-05 25.0 0.7 1.5 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e Rad60-SLD PF11976.8 ORF74819 - 0.03 14.2 0.0 0.042 13.7 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF74819 - 0.21 12.0 0.0 0.32 11.4 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-like domain Cation_ATPase_C PF00689.21 ORF74749 - 3.6e-14 52.9 12.3 4.4e-14 52.6 12.3 1.1 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus DUF1980 PF09323.10 ORF74749 - 0.0011 18.9 0.0 0.0016 18.4 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF1980) zf-B_box PF00643.24 ORF74386 - 0.0014 18.7 5.6 0.0014 18.7 5.6 1.7 2 0 0 2 2 2 1 B-box zinc finger PHD PF00628.29 ORF74386 - 0.0085 16.0 3.4 0.018 14.9 3.4 1.6 1 0 0 1 1 1 1 PHD-finger PHD_2 PF13831.6 ORF74386 - 0.062 12.9 1.0 0.14 11.7 1.0 1.5 1 0 0 1 1 1 0 PHD-finger ATP-synt_C PF00137.21 ORF73780 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C LRR_3 PF07725.12 ORF72430 - 0.83 9.6 8.2 6.1 6.9 0.4 3.3 2 1 1 3 3 3 0 Leucine Rich Repeat DUSP PF06337.12 ORF71016 - 1.6e-10 41.4 0.5 3e-10 40.6 0.5 1.5 1 0 0 1 1 1 1 DUSP domain TetR_C_7 PF14246.6 ORF70879 - 0.0029 17.6 0.8 0.0049 16.9 0.8 1.3 1 0 0 1 1 1 1 AefR-like transcriptional repressor, C-terminal domain Apolipoprotein PF01442.18 ORF70879 - 0.0055 16.6 0.1 2.7 7.8 0.0 2.0 2 0 0 2 2 2 2 Apolipoprotein A1/A4/E domain Phasin_2 PF09361.10 ORF70879 - 0.0074 16.5 3.1 0.014 15.6 0.6 2.1 2 0 0 2 2 2 1 Phasin protein DUF948 PF06103.11 ORF70879 - 0.012 15.9 1.5 0.11 12.8 0.2 2.2 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) ApoLp-III PF07464.11 ORF70879 - 0.088 12.9 0.1 3 7.9 0.1 2.1 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) WXG100 PF06013.12 ORF70879 - 0.15 12.3 3.5 1 9.6 0.5 2.5 2 1 0 2 2 2 0 Proteins of 100 residues with WXG T7SS_ESX_EspC PF10824.8 ORF70879 - 1.7 9.2 9.3 2.5 8.7 0.4 2.2 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm NAC PF01849.18 ORF7087 - 6e-15 55.0 0.1 1.1e-14 54.2 0.1 1.4 1 0 0 1 1 1 1 NAC domain DUF5123 PF17161.4 ORF70264 - 0.0061 17.6 0.4 0.0078 17.3 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5123) Scramblase PF03803.15 ORF70264 - 2.3 7.5 8.0 3.4 6.9 8.0 1.4 1 1 0 1 1 1 0 Scramblase Herpes_BMRF2 PF04633.12 ORF68333 - 0.0095 15.2 1.4 0.013 14.8 1.4 1.1 1 0 0 1 1 1 1 Herpesvirus BMRF2 protein zf-HIT PF04438.16 ORF68260 - 1e-07 31.7 14.5 1.5e-07 31.1 14.5 1.3 1 0 0 1 1 1 1 HIT zinc finger ATP-synt_C PF00137.21 ORF68255 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C DUF1199 PF06712.11 ORF67662 - 0.16 12.1 0.6 12 6.0 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1199) PRK PF00485.18 ORF67222 - 1.8e-32 112.7 0.5 2.2e-32 112.4 0.5 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Patched PF02460.18 ORF67151 - 0.033 12.3 0.0 0.037 12.1 0.0 1.0 1 0 0 1 1 1 0 Patched family DUF3645 PF12359.8 ORF6650 - 0.041 13.3 0.1 0.1 12.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3645) Pkinase PF00069.25 ORF65918 - 6.8e-12 45.3 2.9 8.7e-12 45.0 2.9 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF65918 - 1.1e-07 31.4 0.2 1.1e-07 31.4 0.2 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF65918 - 0.00013 20.9 0.1 0.0013 17.6 0.1 1.9 1 1 1 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF65918 - 0.00038 19.9 0.1 0.00043 19.7 0.1 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF65918 - 0.013 15.4 0.0 0.033 14.1 0.0 1.7 1 1 1 2 2 2 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF65918 - 0.043 13.4 0.3 0.062 12.9 0.3 1.3 1 1 0 1 1 1 0 RIO1 family Kinase-like PF14531.6 ORF65918 - 0.089 12.1 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Kinase-like ER_lumen_recept PF00810.18 ORF65797 - 0.0095 16.8 4.7 0.012 16.4 4.7 1.2 1 0 0 1 1 1 1 ER lumen protein retaining receptor TauE PF01925.19 ORF65797 - 0.036 13.7 0.1 0.043 13.4 0.1 1.1 1 0 0 1 1 1 0 Sulfite exporter TauE/SafE MORN PF02493.20 ORF65790 - 0.13 12.2 4.3 0.39 10.7 3.0 2.4 1 1 1 2 2 2 0 MORN repeat UBA_4 PF14555.6 ORF65742 - 0.071 12.9 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 UBA-like domain HrpB2 PF09487.10 ORF65263 - 0.01 16.3 0.4 0.014 15.8 0.4 1.3 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB2) DUSP PF06337.12 ORF63702 - 0.00011 22.7 0.3 0.00019 22.0 0.3 1.3 1 0 0 1 1 1 1 DUSP domain s48_45 PF07422.13 ORF63702 - 0.0091 16.6 0.3 0.013 16.1 0.3 1.2 1 0 0 1 1 1 1 Sexual stage antigen s48/45 domain NAD_binding_11 PF14833.6 ORF62100 - 5.4e-31 107.4 0.0 6.8e-31 107.1 0.0 1.1 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TatD_DNase PF01026.21 ORF61149 - 0.087 12.2 0.2 0.12 11.7 0.2 1.2 1 0 0 1 1 1 0 TatD related DNase Fe_hyd_SSU PF02256.17 ORF59180 - 2.4e-05 24.3 1.4 0.031 14.4 0.1 2.4 2 0 0 2 2 2 2 Iron hydrogenase small subunit DUF3446 PF11928.8 ORF56522 - 0.92 9.9 8.0 0.31 11.4 3.4 2.0 2 0 0 2 2 2 0 Early growth response N-terminal domain DUF3446 PF11928.8 ORF56214 - 0.92 9.9 8.0 0.31 11.4 3.4 2.0 2 0 0 2 2 2 0 Early growth response N-terminal domain TPR_2 PF07719.17 ORF56123 - 4.4e-16 57.6 1.4 3.3e-05 23.6 0.0 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF56123 - 2.1e-15 55.8 4.7 0.00014 21.6 0.1 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 ORF56123 - 3.9e-10 39.2 2.9 0.00029 20.5 0.3 3.3 2 1 1 3 3 3 3 TPR repeat TPR_8 PF13181.6 ORF56123 - 1.8e-06 27.7 12.7 0.00012 22.0 0.1 4.6 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF56123 - 0.00099 19.3 1.1 0.003 17.8 0.1 2.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF56123 - 0.0054 17.0 0.2 0.69 10.3 0.0 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF56123 - 0.0092 16.1 0.0 0.055 13.6 0.0 2.0 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF56123 - 0.014 16.0 1.7 0.052 14.2 0.0 2.6 3 0 0 3 3 2 0 Tetratricopeptide repeat Paf67 PF10255.9 ORF56123 - 0.052 12.5 0.8 0.32 9.9 0.0 1.9 2 0 0 2 2 2 0 RNA polymerase I-associated factor PAF67 TPR_16 PF13432.6 ORF56123 - 0.052 14.2 0.0 6.3 7.5 0.0 2.3 1 1 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 ORF56123 - 0.55 10.3 5.3 0.32 11.1 1.0 2.8 1 1 0 2 2 2 0 MIT (microtubule interacting and transport) domain Cytochrome_CBB3 PF13442.6 ORF55521 - 7e-16 58.3 0.1 1.1e-15 57.6 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF55521 - 3.9e-07 31.1 0.6 5.1e-06 27.5 0.6 2.2 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF55521 - 7e-05 22.6 0.3 0.00034 20.3 0.2 1.9 1 1 1 2 2 2 1 Cytochrome c-550 domain FapA PF03961.13 ORF54241 - 0.0061 15.2 1.4 0.0067 15.1 1.4 1.2 1 0 0 1 1 1 1 Flagellar Assembly Protein A DASH_Dad4 PF08650.10 ORF54241 - 0.0094 15.9 0.2 0.025 14.5 0.2 1.8 1 0 0 1 1 1 1 DASH complex subunit Dad4 RestrictionMunI PF11407.8 ORF54241 - 0.035 13.8 0.4 0.057 13.1 0.3 1.4 1 1 0 1 1 1 0 Type II restriction enzyme MunI PHB_depo_C PF06850.11 ORF54241 - 0.12 11.8 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 PHB de-polymerase C-terminus ADIP PF11559.8 ORF53979 - 0.0055 16.8 13.0 0.02 15.0 2.3 2.2 1 1 1 2 2 2 2 Afadin- and alpha -actinin-Binding FAM76 PF16046.5 ORF53979 - 0.016 14.5 13.3 0.018 14.4 13.3 1.0 1 0 0 1 1 1 0 FAM76 protein PI_PP_I PF18363.1 ORF53979 - 0.16 12.2 3.3 0.38 11.0 0.4 2.5 1 1 0 2 2 2 0 Phosphoinositide phosphatase insertion domain ATG16 PF08614.11 ORF53979 - 0.18 12.0 13.0 1.9 8.7 3.8 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) KxDL PF10241.9 ORF53979 - 0.35 11.2 11.9 0.14 12.4 1.7 3.1 1 1 2 3 3 3 0 Uncharacterized conserved protein DUF2203 PF09969.9 ORF53979 - 0.81 10.4 9.9 3.8 8.3 2.6 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) HMMR_N PF15905.5 ORF53979 - 1 8.8 20.1 2.2 7.7 19.8 1.6 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal ZapB PF06005.12 ORF53979 - 1.1 9.8 14.6 1.9 9.0 5.0 2.9 1 1 1 2 2 2 0 Cell division protein ZapB SlyX PF04102.12 ORF53979 - 1.3 9.7 9.1 0.11 13.2 1.3 2.7 1 1 1 3 3 3 0 SlyX AAA_6 PF12774.7 ORF53979 - 1.4 7.8 5.0 1.9 7.4 5.0 1.1 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region DUF724 PF05266.14 ORF53979 - 1.8 8.3 13.1 0.23 11.3 8.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 ORF53979 - 3.2 7.8 21.3 2.6 8.1 14.3 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF53979 - 4.5 7.6 13.0 4 7.7 3.6 2.4 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain XhlA PF10779.9 ORF53979 - 6.5 7.0 9.4 14 6.0 2.2 2.9 1 1 3 4 4 4 0 Haemolysin XhlA zinc_ribbon_2 PF13240.6 ORF53857 - 2.1e-05 24.1 4.0 3.4e-05 23.4 4.0 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF53857 - 3.7e-05 23.0 2.2 6.5e-05 22.2 2.2 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF53857 - 0.00035 20.5 0.8 0.00057 19.9 0.8 1.3 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 ORF53857 - 0.014 15.4 0.3 0.026 14.5 0.3 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Filament PF00038.21 ORF53857 - 0.055 13.0 0.4 0.082 12.5 0.4 1.3 1 0 0 1 1 1 0 Intermediate filament protein Snapin_Pallidin PF14712.6 ORF53857 - 0.079 13.4 4.3 0.16 12.4 4.3 1.5 1 0 0 1 1 1 0 Snapin/Pallidin TF_Zn_Ribbon PF08271.12 ORF53857 - 0.08 12.5 0.2 0.2 11.2 0.3 1.6 1 1 1 2 2 2 0 TFIIB zinc-binding YlqD PF11068.8 ORF53857 - 0.16 12.3 1.8 0.24 11.8 1.8 1.2 1 0 0 1 1 1 0 YlqD protein DUF1678 PF07913.11 ORF53857 - 0.17 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1678) RNA_POL_M_15KD PF02150.16 ORF53857 - 0.19 11.7 1.1 6.6 6.7 0.0 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Nudix_N_2 PF14803.6 ORF53857 - 0.27 11.2 3.7 2.7 8.0 0.3 2.3 2 0 0 2 2 2 0 Nudix N-terminal DNA_RNApol_7kD PF03604.13 ORF53857 - 1.3 8.7 4.4 3.3 7.5 4.4 1.6 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit NOB1_Zn_bind PF08772.11 ORF53857 - 3.5 7.8 5.8 17 5.6 0.7 2.3 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Toxin_9 PF02819.15 ORF52467 - 0.019 15.2 19.0 1.9 8.8 2.4 3.5 3 0 0 3 3 3 0 Spider toxin EamA PF00892.20 ORF51943 - 1e-06 28.9 4.7 1e-06 28.9 4.7 1.5 2 0 0 2 2 2 1 EamA-like transporter family TPT PF03151.16 ORF51943 - 0.00063 19.2 6.8 0.00079 18.9 6.8 1.2 1 0 0 1 1 1 1 Triose-phosphate Transporter family DeoRC PF00455.22 ORF51508 - 7.7e-46 156.0 2.8 9e-46 155.7 2.8 1.0 1 0 0 1 1 1 1 DeoR C terminal sensor domain Rib_5-P_isom_A PF06026.14 ORF51508 - 0.039 13.6 0.2 0.059 13.0 0.2 1.3 1 0 0 1 1 1 0 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Cytochrome_CBB3 PF13442.6 ORF51031 - 7e-16 58.3 0.1 1.1e-15 57.6 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF51031 - 3.9e-07 31.1 0.6 5.1e-06 27.5 0.6 2.2 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF51031 - 7e-05 22.6 0.3 0.00034 20.3 0.2 1.9 1 1 1 2 2 2 1 Cytochrome c-550 domain DUF1525 PF07511.11 ORF50573 - 0.25 11.5 2.2 2.9 8.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1525) DUF4268 PF14088.6 ORF50495 - 0.0048 16.8 2.8 0.0048 16.8 2.8 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4268) LRR_3 PF07725.12 ORF48937 - 0.83 9.6 8.2 6.1 6.9 0.4 3.3 2 1 1 3 3 3 0 Leucine Rich Repeat EF-hand_8 PF13833.6 ORF4848 - 8.7e-06 25.5 3.1 4.9e-05 23.1 0.4 2.7 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF4848 - 9.2e-06 25.2 1.2 0.00014 21.5 0.2 3.0 3 0 0 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 ORF4848 - 9.6e-06 26.0 3.8 0.0029 18.0 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF4848 - 3.4e-05 23.1 2.7 0.00017 20.9 0.3 3.1 3 0 0 3 3 3 1 EF hand EF-hand_5 PF13202.6 ORF4848 - 0.001 18.4 0.8 0.0028 17.1 0.0 2.2 2 1 0 2 2 2 1 EF hand p25-alpha PF05517.12 ORF4848 - 0.16 12.2 0.0 2 8.6 0.0 2.1 2 0 0 2 2 2 0 p25-alpha ATP-synt_C PF00137.21 ORF47395 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C Ank_4 PF13637.6 ORF46577 - 6.1e-19 68.1 0.6 3.5e-05 24.3 0.1 4.0 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF46577 - 9.8e-17 61.3 0.1 3.1e-08 34.1 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF46577 - 3.6e-15 55.8 3.0 1e-09 38.5 0.4 2.7 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF46577 - 6.3e-13 48.5 1.5 0.00019 21.7 0.1 5.0 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF46577 - 2.4e-11 42.8 1.5 0.00028 21.1 0.0 5.3 5 1 0 5 5 5 3 Ankyrin repeat DUF3018 PF11455.8 ORF46537 - 0.017 15.0 0.1 0.029 14.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3018) RNA_pol_Rpb2_5 PF04567.17 ORF4470 - 3.6 8.2 4.9 6.8 7.3 4.9 1.5 1 1 0 1 1 1 0 RNA polymerase Rpb2, domain 5 Mlf1IP PF10248.9 ORF42911 - 0.14 12.1 12.5 0.25 11.3 12.4 1.3 1 1 0 1 1 1 0 Myelodysplasia-myeloid leukemia factor 1-interacting protein DUF3340 PF11818.8 ORF42911 - 0.31 11.2 2.7 0.39 10.9 2.7 1.1 1 0 0 1 1 1 0 C-terminal domain of tail specific protease (DUF3340) Thioredoxin_8 PF13905.6 ORF41681 - 1.3e-19 70.3 0.2 2e-19 69.7 0.2 1.2 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF41681 - 0.0033 17.8 0.1 0.0045 17.4 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Redoxin PF08534.10 ORF41681 - 0.027 14.2 0.1 0.043 13.5 0.1 1.3 1 0 0 1 1 1 0 Redoxin Thioredoxin PF00085.20 ORF41681 - 0.041 13.9 1.7 2 8.4 1.2 2.2 1 1 1 2 2 2 0 Thioredoxin AhpC-TSA PF00578.21 ORF41681 - 0.043 13.7 0.1 0.059 13.3 0.1 1.2 1 0 0 1 1 1 0 AhpC/TSA family ABC_tran PF00005.27 ORF39823 - 7.7e-16 58.8 0.0 1e-15 58.5 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF39823 - 7.5e-05 22.3 0.2 0.0001 21.9 0.2 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TPD PF14811.6 ORF39823 - 0.007 16.2 0.0 0.013 15.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif DMP12 PF16779.5 ORF39823 - 0.032 14.2 0.8 0.06 13.3 0.7 1.5 1 1 0 1 1 1 0 DNA-mimic protein GreA_GreB_N PF03449.15 ORF38741 - 0.056 13.6 0.7 0.11 12.7 0.7 1.5 1 0 0 1 1 1 0 Transcription elongation factor, N-terminal DUF932 PF06067.11 ORF38741 - 0.12 12.1 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF932) EF-hand_1 PF00036.32 ORF37436 - 1.3e-41 137.1 11.9 2e-10 39.4 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF37436 - 2.1e-35 121.0 2.9 5.2e-18 65.3 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF37436 - 2.8e-31 104.7 5.5 1.5e-09 37.0 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF37436 - 5.8e-31 106.1 10.8 1e-14 54.1 0.7 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF37436 - 8.1e-27 91.5 9.4 2.7e-06 26.6 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF37436 - 6.8e-16 58.4 0.2 7.9e-09 35.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF37436 - 3.5e-09 36.5 0.5 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF37436 - 5.6e-08 33.1 0.3 0.0054 17.0 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF37436 - 2e-07 31.8 0.0 0.00022 22.0 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF37436 - 2.5e-06 27.4 0.0 0.05 13.6 0.0 3.4 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0154) TerB PF05099.13 ORF37436 - 1.8e-05 24.7 0.2 0.1 12.6 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF37436 - 0.00012 22.2 4.0 0.017 15.3 0.3 2.8 2 2 0 2 2 2 2 Dockerin type I domain EFhand_Ca_insen PF08726.10 ORF37436 - 0.00019 21.5 1.1 0.00079 19.5 0.1 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF37436 - 0.00044 21.0 0.4 1.5 9.7 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF37436 - 0.00082 19.3 0.6 0.62 10.0 0.0 3.5 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF37436 - 0.0034 17.7 0.2 1.8 8.9 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF37436 - 0.012 15.8 0.1 0.2 11.8 0.0 2.2 2 0 0 2 2 2 0 Transcription factor MotA, activation domain YqeY PF09424.10 ORF37436 - 0.016 15.3 0.4 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein DUF1103 PF06513.11 ORF37436 - 0.017 14.7 1.7 0.02 14.5 1.7 1.1 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) SurA_N_2 PF13623.6 ORF37436 - 0.02 14.7 0.5 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain EF-hand_14 PF17959.1 ORF37436 - 0.023 15.0 0.1 12 6.4 0.0 2.9 1 1 2 3 3 3 0 EF-hand domain PB1 PF00564.24 ORF37436 - 0.027 14.4 1.6 8.5 6.4 0.0 3.8 2 2 2 4 4 4 0 PB1 domain DUF5580 PF17743.1 ORF37436 - 0.027 13.0 0.0 0.03 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) Poly_export PF02563.16 ORF37436 - 0.031 14.5 0.1 8.9 6.6 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein Fe_hyd_lg_C PF02906.14 ORF37436 - 0.054 13.2 0.5 0.16 11.6 0.4 1.8 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF37436 - 0.086 12.0 0.0 5.6 6.1 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF37436 - 0.11 11.0 0.1 2.4 6.7 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF37436 - 0.11 12.9 0.0 8.2 7.0 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF37436 - 0.15 11.9 2.6 5.6 6.9 0.1 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF37436 - 0.17 11.9 2.6 31 4.7 0.1 3.6 4 0 0 4 4 4 0 Saposin-like type B, region 1 SP2 PF03014.14 ORF36130 - 0.72 8.2 3.9 0.87 7.9 3.9 1.0 1 0 0 1 1 1 0 Structural protein 2 KAsynt_C_assoc PF16197.5 ORF35813 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF35813 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF35813 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family DUF1647 PF07801.11 ORF34385 - 0.0028 17.4 1.4 0.0035 17.1 1.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1647) EF-hand_1 PF00036.32 ORF33993 - 2.5e-22 76.7 11.9 8.5e-08 31.2 0.5 3.7 4 0 0 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF33993 - 8.3e-19 67.8 5.0 8.4e-11 42.2 1.8 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF33993 - 6.7e-18 63.0 7.5 3e-06 26.7 0.5 3.6 3 0 0 3 3 3 3 EF-hand domain EF-hand_8 PF13833.6 ORF33993 - 5e-16 58.3 11.8 1.2e-07 31.5 0.2 3.3 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF33993 - 1.8e-14 52.5 12.1 1.6e-05 24.2 0.7 3.8 4 0 0 4 4 4 3 EF hand EF-hand_4 PF12763.7 ORF33993 - 3.9e-07 30.0 10.9 0.00047 20.1 1.5 3.0 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF33993 - 1.8e-05 25.0 4.2 0.00063 20.0 0.4 2.4 2 1 1 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region VCBS PF13517.6 ORF33993 - 0.019 15.6 3.0 2 9.1 0.3 2.3 2 0 0 2 2 2 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella EF-hand_9 PF14658.6 ORF33993 - 0.032 14.5 0.3 0.63 10.4 0.3 2.7 2 1 0 2 2 2 0 EF-hand domain DUF4011 PF13195.6 ORF33993 - 0.047 13.6 0.3 0.1 12.5 0.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4011) Dockerin_1 PF00404.18 ORF33993 - 0.096 12.9 6.8 0.93 9.7 2.5 3.1 2 1 1 3 3 3 0 Dockerin type I domain gp45-slide_C PF09116.10 ORF33993 - 0.13 12.3 3.1 0.093 12.8 0.8 1.8 1 1 0 2 2 2 0 gp45 sliding clamp, C terminal DUF3194 PF11419.8 ORF33993 - 0.16 12.4 3.1 0.29 11.5 0.4 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF3194) DUF3169 PF11368.8 ORF33993 - 1.1 8.7 4.4 5 6.6 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) Metallophos PF00149.28 ORF33414 - 1.5e-16 61.5 0.2 2.5e-16 60.8 0.2 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PPP5 PF08321.12 ORF33414 - 0.11 12.8 0.1 0.19 12.1 0.1 1.3 1 0 0 1 1 1 0 PPP5 TPR repeat region DUF5378 PF17349.2 ORF33414 - 0.15 11.4 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5378) Peptidase_A8 PF01252.18 ORF32773 - 1e-37 129.5 8.6 1.2e-37 129.3 8.6 1.0 1 0 0 1 1 1 1 Signal peptidase (SPase) II MscL PF01741.18 ORF32773 - 0.049 13.9 0.1 0.087 13.1 0.1 1.4 1 1 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL ThrE PF06738.12 ORF32773 - 0.84 9.0 5.2 1.3 8.3 5.2 1.4 1 1 0 1 1 1 0 Putative threonine/serine exporter Pentapeptide_2 PF01469.18 ORF32626 - 0.61 10.0 26.6 0.19 11.6 16.8 2.5 1 1 1 2 2 2 0 Pentapeptide repeats (8 copies) EF-hand_1 PF00036.32 ORF31114 - 1.3e-41 137.1 11.9 2e-10 39.4 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF31114 - 2.1e-35 121.0 2.9 5.2e-18 65.3 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF31114 - 2.8e-31 104.7 5.5 1.5e-09 37.0 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF31114 - 5.8e-31 106.1 10.8 1e-14 54.1 0.7 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF31114 - 8.1e-27 91.5 9.4 2.7e-06 26.6 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF31114 - 6.8e-16 58.4 0.2 7.9e-09 35.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF31114 - 3.5e-09 36.5 0.5 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF31114 - 5.6e-08 33.1 0.3 0.0054 17.0 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF31114 - 2e-07 31.8 0.0 0.00022 22.0 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF31114 - 2.5e-06 27.4 0.0 0.05 13.6 0.0 3.4 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0154) TerB PF05099.13 ORF31114 - 1.8e-05 24.7 0.2 0.1 12.6 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF31114 - 0.00012 22.2 4.0 0.017 15.3 0.3 2.8 2 2 0 2 2 2 2 Dockerin type I domain EFhand_Ca_insen PF08726.10 ORF31114 - 0.00019 21.5 1.1 0.00079 19.5 0.1 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF31114 - 0.00044 21.0 0.4 1.5 9.7 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF31114 - 0.00082 19.3 0.6 0.62 10.0 0.0 3.5 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF31114 - 0.0034 17.7 0.2 1.8 8.9 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF31114 - 0.012 15.8 0.1 0.2 11.8 0.0 2.2 2 0 0 2 2 2 0 Transcription factor MotA, activation domain YqeY PF09424.10 ORF31114 - 0.016 15.3 0.4 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein DUF1103 PF06513.11 ORF31114 - 0.017 14.7 1.7 0.02 14.5 1.7 1.1 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) SurA_N_2 PF13623.6 ORF31114 - 0.02 14.7 0.5 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain EF-hand_14 PF17959.1 ORF31114 - 0.023 15.0 0.1 12 6.4 0.0 2.9 1 1 2 3 3 3 0 EF-hand domain PB1 PF00564.24 ORF31114 - 0.027 14.4 1.6 8.5 6.4 0.0 3.8 2 2 2 4 4 4 0 PB1 domain DUF5580 PF17743.1 ORF31114 - 0.027 13.0 0.0 0.03 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) Poly_export PF02563.16 ORF31114 - 0.031 14.5 0.1 8.9 6.6 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein Fe_hyd_lg_C PF02906.14 ORF31114 - 0.054 13.2 0.5 0.16 11.6 0.4 1.8 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF31114 - 0.086 12.0 0.0 5.6 6.1 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF31114 - 0.11 11.0 0.1 2.4 6.7 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF31114 - 0.11 12.9 0.0 8.2 7.0 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF31114 - 0.15 11.9 2.6 5.6 6.9 0.1 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF31114 - 0.17 11.9 2.6 31 4.7 0.1 3.6 4 0 0 4 4 4 0 Saposin-like type B, region 1 DUF192 PF02643.15 ORF30987 - 0.23 11.6 1.0 2.7 8.2 0.3 2.3 1 1 1 2 2 2 0 Uncharacterized ACR, COG1430 Pox_P21 PF05313.12 ORF30987 - 0.37 10.3 19.0 0.15 11.6 16.1 1.7 1 1 1 2 2 2 0 Poxvirus P21 membrane protein DUF5464 PF17552.2 ORF3086 - 0.94 9.8 5.8 4.6 7.6 1.4 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5464) LuxC PF05893.14 ORF29064 - 0.19 10.7 0.0 0.25 10.3 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) RNA_pol_Rpb5_C PF01191.19 ORF28337 - 0.0017 18.2 0.7 0.0043 16.9 0.7 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain Cmc1 PF08583.10 ORF28337 - 0.0044 17.0 2.0 0.017 15.1 0.1 2.2 2 0 0 2 2 2 1 Cytochrome c oxidase biogenesis protein Cmc1 like RNA_pol_Rpb5_N PF03871.14 ORF28337 - 0.064 13.8 0.0 0.15 12.7 0.0 1.8 1 1 0 1 1 1 0 RNA polymerase Rpb5, N-terminal domain MTHFR_C PF12225.8 ORF28157 - 2.8 7.6 7.9 10 5.9 0.1 2.4 1 1 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal SOGA PF11365.8 ORF26355 - 0.054 14.6 4.2 0.1 13.8 4.2 1.5 1 0 0 1 1 1 0 Protein SOGA Nup88 PF10168.9 ORF26355 - 1.3 6.7 7.4 1.9 6.2 6.9 1.4 1 1 1 2 2 2 0 Nuclear pore component EF-hand_1 PF00036.32 ORF2615 - 1.3e-41 137.1 11.9 2e-10 39.4 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF2615 - 2.1e-35 121.0 2.9 5.2e-18 65.3 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF2615 - 2.8e-31 104.7 5.5 1.5e-09 37.0 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF2615 - 5.8e-31 106.1 10.8 1e-14 54.1 0.7 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF2615 - 8.1e-27 91.5 9.4 2.7e-06 26.6 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF2615 - 6.8e-16 58.4 0.2 7.9e-09 35.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF2615 - 3.5e-09 36.5 0.5 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF2615 - 5.6e-08 33.1 0.3 0.0054 17.0 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF2615 - 2e-07 31.8 0.0 0.00022 22.0 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF2615 - 2.5e-06 27.4 0.0 0.05 13.6 0.0 3.4 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0154) TerB PF05099.13 ORF2615 - 1.8e-05 24.7 0.2 0.1 12.6 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF2615 - 0.00012 22.2 4.0 0.017 15.3 0.3 2.8 2 2 0 2 2 2 2 Dockerin type I domain EFhand_Ca_insen PF08726.10 ORF2615 - 0.00019 21.5 1.1 0.00079 19.5 0.1 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF2615 - 0.00044 21.0 0.4 1.5 9.7 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF2615 - 0.00082 19.3 0.6 0.62 10.0 0.0 3.5 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF2615 - 0.0034 17.7 0.2 1.8 8.9 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF2615 - 0.012 15.8 0.1 0.2 11.8 0.0 2.2 2 0 0 2 2 2 0 Transcription factor MotA, activation domain YqeY PF09424.10 ORF2615 - 0.016 15.3 0.4 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein DUF1103 PF06513.11 ORF2615 - 0.017 14.7 1.7 0.02 14.5 1.7 1.1 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) SurA_N_2 PF13623.6 ORF2615 - 0.02 14.7 0.5 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain EF-hand_14 PF17959.1 ORF2615 - 0.023 15.0 0.1 12 6.4 0.0 2.9 1 1 2 3 3 3 0 EF-hand domain PB1 PF00564.24 ORF2615 - 0.027 14.4 1.6 8.5 6.4 0.0 3.8 2 2 2 4 4 4 0 PB1 domain DUF5580 PF17743.1 ORF2615 - 0.027 13.0 0.0 0.03 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) Poly_export PF02563.16 ORF2615 - 0.031 14.5 0.1 8.9 6.6 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein Fe_hyd_lg_C PF02906.14 ORF2615 - 0.054 13.2 0.5 0.16 11.6 0.4 1.8 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF2615 - 0.086 12.0 0.0 5.6 6.1 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF2615 - 0.11 11.0 0.1 2.4 6.7 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF2615 - 0.11 12.9 0.0 8.2 7.0 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF2615 - 0.15 11.9 2.6 5.6 6.9 0.1 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF2615 - 0.17 11.9 2.6 31 4.7 0.1 3.6 4 0 0 4 4 4 0 Saposin-like type B, region 1 DUF730 PF05325.11 ORF23069 - 0.021 14.9 0.2 0.036 14.1 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF730) EF-hand_1 PF00036.32 ORF22419 - 1.3e-41 137.1 11.9 2e-10 39.4 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF22419 - 2.1e-35 121.0 2.9 5.2e-18 65.3 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF22419 - 2.8e-31 104.7 5.5 1.5e-09 37.0 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF22419 - 5.8e-31 106.1 10.8 1e-14 54.1 0.7 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF22419 - 8.1e-27 91.5 9.4 2.7e-06 26.6 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF22419 - 6.8e-16 58.4 0.2 7.9e-09 35.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF22419 - 3.5e-09 36.5 0.5 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF22419 - 5.6e-08 33.1 0.3 0.0054 17.0 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF22419 - 2e-07 31.8 0.0 0.00022 22.0 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF22419 - 2.5e-06 27.4 0.0 0.05 13.6 0.0 3.4 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0154) TerB PF05099.13 ORF22419 - 1.8e-05 24.7 0.2 0.1 12.6 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF22419 - 0.00012 22.2 4.0 0.017 15.3 0.3 2.8 2 2 0 2 2 2 2 Dockerin type I domain EFhand_Ca_insen PF08726.10 ORF22419 - 0.00019 21.5 1.1 0.00079 19.5 0.1 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF22419 - 0.00044 21.0 0.4 1.5 9.7 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF22419 - 0.00082 19.3 0.6 0.62 10.0 0.0 3.5 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF22419 - 0.0034 17.7 0.2 1.8 8.9 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF22419 - 0.012 15.8 0.1 0.2 11.8 0.0 2.2 2 0 0 2 2 2 0 Transcription factor MotA, activation domain YqeY PF09424.10 ORF22419 - 0.016 15.3 0.4 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein DUF1103 PF06513.11 ORF22419 - 0.017 14.7 1.7 0.02 14.5 1.7 1.1 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) SurA_N_2 PF13623.6 ORF22419 - 0.02 14.7 0.5 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain EF-hand_14 PF17959.1 ORF22419 - 0.023 15.0 0.1 12 6.4 0.0 2.9 1 1 2 3 3 3 0 EF-hand domain PB1 PF00564.24 ORF22419 - 0.027 14.4 1.6 8.5 6.4 0.0 3.8 2 2 2 4 4 4 0 PB1 domain DUF5580 PF17743.1 ORF22419 - 0.027 13.0 0.0 0.03 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) Poly_export PF02563.16 ORF22419 - 0.031 14.5 0.1 8.9 6.6 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein Fe_hyd_lg_C PF02906.14 ORF22419 - 0.054 13.2 0.5 0.16 11.6 0.4 1.8 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF22419 - 0.086 12.0 0.0 5.6 6.1 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF22419 - 0.11 11.0 0.1 2.4 6.7 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF22419 - 0.11 12.9 0.0 8.2 7.0 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF22419 - 0.15 11.9 2.6 5.6 6.9 0.1 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF22419 - 0.17 11.9 2.6 31 4.7 0.1 3.6 4 0 0 4 4 4 0 Saposin-like type B, region 1 DUF3446 PF11928.8 ORF22390 - 0.92 9.9 8.0 0.31 11.4 3.4 2.0 2 0 0 2 2 2 0 Early growth response N-terminal domain ATP-synt_C PF00137.21 ORF22261 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C EF-hand_1 PF00036.32 ORF21831 - 1.3e-41 137.1 11.9 2e-10 39.4 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF21831 - 2.1e-35 121.0 2.9 5.2e-18 65.3 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF21831 - 2.8e-31 104.7 5.5 1.5e-09 37.0 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF21831 - 5.8e-31 106.1 10.8 1e-14 54.1 0.7 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF21831 - 8.1e-27 91.5 9.4 2.7e-06 26.6 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF21831 - 6.8e-16 58.4 0.2 7.9e-09 35.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF21831 - 3.5e-09 36.5 0.5 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF21831 - 5.6e-08 33.1 0.3 0.0054 17.0 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF21831 - 2e-07 31.8 0.0 0.00022 22.0 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF21831 - 2.5e-06 27.4 0.0 0.05 13.6 0.0 3.4 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0154) TerB PF05099.13 ORF21831 - 1.8e-05 24.7 0.2 0.1 12.6 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF21831 - 0.00012 22.2 4.0 0.017 15.3 0.3 2.8 2 2 0 2 2 2 2 Dockerin type I domain EFhand_Ca_insen PF08726.10 ORF21831 - 0.00019 21.5 1.1 0.00079 19.5 0.1 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF21831 - 0.00044 21.0 0.4 1.5 9.7 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF21831 - 0.00082 19.3 0.6 0.62 10.0 0.0 3.5 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF21831 - 0.0034 17.7 0.2 1.8 8.9 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF21831 - 0.012 15.8 0.1 0.2 11.8 0.0 2.2 2 0 0 2 2 2 0 Transcription factor MotA, activation domain YqeY PF09424.10 ORF21831 - 0.016 15.3 0.4 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein DUF1103 PF06513.11 ORF21831 - 0.017 14.7 1.7 0.02 14.5 1.7 1.1 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) SurA_N_2 PF13623.6 ORF21831 - 0.02 14.7 0.5 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain EF-hand_14 PF17959.1 ORF21831 - 0.023 15.0 0.1 12 6.4 0.0 2.9 1 1 2 3 3 3 0 EF-hand domain PB1 PF00564.24 ORF21831 - 0.027 14.4 1.6 8.5 6.4 0.0 3.8 2 2 2 4 4 4 0 PB1 domain DUF5580 PF17743.1 ORF21831 - 0.027 13.0 0.0 0.03 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) Poly_export PF02563.16 ORF21831 - 0.031 14.5 0.1 8.9 6.6 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein Fe_hyd_lg_C PF02906.14 ORF21831 - 0.054 13.2 0.5 0.16 11.6 0.4 1.8 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF21831 - 0.086 12.0 0.0 5.6 6.1 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF21831 - 0.11 11.0 0.1 2.4 6.7 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF21831 - 0.11 12.9 0.0 8.2 7.0 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF21831 - 0.15 11.9 2.6 5.6 6.9 0.1 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF21831 - 0.17 11.9 2.6 31 4.7 0.1 3.6 4 0 0 4 4 4 0 Saposin-like type B, region 1 Usp PF00582.26 ORF19395 - 0.23 11.9 0.3 0.3 11.6 0.3 1.1 1 0 0 1 1 1 0 Universal stress protein family LRR_3 PF07725.12 ORF18424 - 0.83 9.6 8.2 6.1 6.9 0.4 3.3 2 1 1 3 3 3 0 Leucine Rich Repeat Ribosomal_L11_N PF03946.14 ORF1812 - 2.4e-17 62.5 1.2 4.3e-17 61.7 1.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF1812 - 2.2e-15 56.9 0.1 3.7e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain HK_sensor PF16750.5 ORF16365 - 0.04 14.2 0.0 0.062 13.6 0.0 1.3 1 0 0 1 1 1 0 Sensor domain of 2-component histidine kinase CIA30 PF08547.12 ORF16330 - 3.1e-15 56.5 0.0 3.6e-15 56.4 0.0 1.0 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) HlyD PF00529.20 ORF16314 - 5.6e-09 35.8 1.0 8e-09 35.3 1.0 1.4 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS HlyD_D23 PF16576.5 ORF16314 - 1.5e-08 34.1 0.0 2.2e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 ORF16314 - 0.00018 22.2 0.2 0.00045 20.9 0.0 1.7 2 1 0 2 2 2 1 HlyD family secretion protein Big_1 PF02369.16 ORF16314 - 0.039 13.9 0.1 0.099 12.7 0.1 1.7 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) POTRA_3 PF17287.2 ORF16314 - 0.11 12.0 0.0 12 5.5 0.0 2.4 2 0 0 2 2 2 0 POTRA domain Keratin_B2 PF01500.17 ORF162 - 0.089 12.8 0.3 0.11 12.4 0.3 1.2 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein YbbR PF07949.12 ORF152790 - 0.015 15.7 0.6 0.043 14.2 0.6 1.9 1 0 0 1 1 1 0 YbbR-like protein SlyX PF04102.12 ORF152790 - 0.073 13.7 7.3 0.53 10.9 0.5 2.4 2 0 0 2 2 2 0 SlyX DUF5082 PF16888.5 ORF152790 - 0.11 12.8 16.7 0.43 10.9 6.9 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) MscS_porin PF12795.7 ORF152790 - 0.13 11.8 12.3 1.9 8.0 12.3 2.1 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain HR1 PF02185.16 ORF152790 - 0.15 12.2 9.4 0.28 11.3 0.3 3.1 2 1 1 3 3 3 0 Hr1 repeat XhlA PF10779.9 ORF152790 - 1.1 9.6 19.8 1.7 8.9 3.2 3.1 2 1 2 4 4 4 0 Haemolysin XhlA FlxA PF14282.6 ORF152790 - 1.6 8.7 19.0 5.5 7.0 0.5 3.0 2 1 0 2 2 2 0 FlxA-like protein Ribonuclease_T2 PF00445.18 ORF152550 - 3.5e-22 79.5 1.1 4.7e-22 79.1 1.1 1.1 1 0 0 1 1 1 1 Ribonuclease T2 family Skp1 PF01466.19 ORF151599 - 7.1e-07 29.2 1.1 1.2e-06 28.5 1.1 1.4 1 0 0 1 1 1 1 Skp1 family, dimerisation domain CDC37_C PF08564.10 ORF151599 - 0.062 13.4 0.0 0.12 12.5 0.0 1.5 1 1 0 1 1 1 0 Cdc37 C terminal domain DNMT1-RFD PF12047.8 ORF151599 - 0.069 13.2 0.9 0.99 9.4 0.1 2.1 2 0 0 2 2 2 0 Cytosine specific DNA methyltransferase replication foci domain Ribosomal_S3Ae PF01015.18 ORF151316 - 2.9e-48 164.1 8.1 3.4e-48 163.9 8.1 1.1 1 0 0 1 1 1 1 Ribosomal S3Ae family Phage_fiber_C PF06820.12 ORF151316 - 0.15 12.4 0.2 0.93 9.9 0.0 2.2 2 0 0 2 2 2 0 Putative prophage tail fibre C-terminus Esterase PF00756.20 ORF149021 - 3.4e-08 33.4 0.0 6.6e-08 32.5 0.0 1.4 1 1 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF149021 - 8e-05 22.2 0.0 9.5e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF149021 - 0.0001 22.1 0.0 0.00021 21.0 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF149021 - 0.00075 18.8 0.0 0.0024 17.2 0.0 1.7 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Ribosomal_S14 PF00253.21 ORF148053 - 0.059 13.1 3.3 0.15 11.9 3.3 1.7 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e Latarcin PF10279.9 ORF145530 - 0.0054 17.1 1.6 0.011 16.2 1.6 1.5 1 0 0 1 1 1 1 Latarcin precursor CobT PF06213.12 ORF145530 - 0.011 15.1 2.7 0.016 14.6 2.7 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Vma12 PF11712.8 ORF145530 - 0.014 15.5 1.0 0.017 15.2 1.0 1.2 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Sec3_C PF09763.9 ORF145530 - 0.036 12.5 7.3 0.045 12.1 7.3 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec3 Presenilin PF01080.17 ORF145530 - 1 8.1 3.7 1 8.0 3.7 1.1 1 0 0 1 1 1 0 Presenilin MAP17 PF15807.5 ORF145530 - 5.5 7.3 8.7 8.7 6.6 8.7 1.3 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Dzip-like_N PF13815.6 ORF145530 - 9.4 6.2 10.2 1.2 9.1 4.4 2.3 1 1 1 3 3 3 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal KAsynt_C_assoc PF16197.5 ORF144661 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF144661 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF144661 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family EF-hand_1 PF00036.32 ORF14439 - 1.3e-41 137.1 11.9 2e-10 39.4 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF14439 - 2.1e-35 121.0 2.9 5.2e-18 65.3 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF14439 - 2.8e-31 104.7 5.5 1.5e-09 37.0 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF14439 - 5.8e-31 106.1 10.8 1e-14 54.1 0.7 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF14439 - 8.1e-27 91.5 9.4 2.7e-06 26.6 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF14439 - 6.8e-16 58.4 0.2 7.9e-09 35.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF14439 - 3.5e-09 36.5 0.5 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF14439 - 5.6e-08 33.1 0.3 0.0054 17.0 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF14439 - 2e-07 31.8 0.0 0.00022 22.0 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF14439 - 2.5e-06 27.4 0.0 0.05 13.6 0.0 3.4 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0154) TerB PF05099.13 ORF14439 - 1.8e-05 24.7 0.2 0.1 12.6 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF14439 - 0.00012 22.2 4.0 0.017 15.3 0.3 2.8 2 2 0 2 2 2 2 Dockerin type I domain EFhand_Ca_insen PF08726.10 ORF14439 - 0.00019 21.5 1.1 0.00079 19.5 0.1 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF14439 - 0.00044 21.0 0.4 1.5 9.7 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF14439 - 0.00082 19.3 0.6 0.62 10.0 0.0 3.5 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF14439 - 0.0034 17.7 0.2 1.8 8.9 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF14439 - 0.012 15.8 0.1 0.2 11.8 0.0 2.2 2 0 0 2 2 2 0 Transcription factor MotA, activation domain YqeY PF09424.10 ORF14439 - 0.016 15.3 0.4 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein DUF1103 PF06513.11 ORF14439 - 0.017 14.7 1.7 0.02 14.5 1.7 1.1 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) SurA_N_2 PF13623.6 ORF14439 - 0.02 14.7 0.5 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain EF-hand_14 PF17959.1 ORF14439 - 0.023 15.0 0.1 12 6.4 0.0 2.9 1 1 2 3 3 3 0 EF-hand domain PB1 PF00564.24 ORF14439 - 0.027 14.4 1.6 8.5 6.4 0.0 3.8 2 2 2 4 4 4 0 PB1 domain DUF5580 PF17743.1 ORF14439 - 0.027 13.0 0.0 0.03 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) Poly_export PF02563.16 ORF14439 - 0.031 14.5 0.1 8.9 6.6 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein Fe_hyd_lg_C PF02906.14 ORF14439 - 0.054 13.2 0.5 0.16 11.6 0.4 1.8 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF14439 - 0.086 12.0 0.0 5.6 6.1 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF14439 - 0.11 11.0 0.1 2.4 6.7 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF14439 - 0.11 12.9 0.0 8.2 7.0 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF14439 - 0.15 11.9 2.6 5.6 6.9 0.1 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF14439 - 0.17 11.9 2.6 31 4.7 0.1 3.6 4 0 0 4 4 4 0 Saposin-like type B, region 1 DUF3446 PF11928.8 ORF144102 - 0.92 9.9 8.0 0.31 11.4 3.4 2.0 2 0 0 2 2 2 0 Early growth response N-terminal domain Acetyltransf_1 PF00583.25 ORF140299 - 1.2e-11 44.9 0.0 1.4e-11 44.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF140299 - 8.7e-09 35.4 0.0 1e-08 35.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF140299 - 0.0007 20.0 0.0 0.001 19.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF140299 - 0.00086 19.2 0.0 0.002 18.1 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 ORF140299 - 0.0038 17.9 0.0 0.0043 17.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF140299 - 0.021 14.5 0.0 0.027 14.1 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 ORF140299 - 0.029 13.8 0.3 0.036 13.5 0.3 1.4 1 1 0 1 1 1 0 Putative acetyl-transferase MORN PF02493.20 ORF137161 - 0.13 12.2 4.3 0.39 10.7 3.0 2.4 1 1 1 2 2 2 0 MORN repeat EF-hand_1 PF00036.32 ORF132438 - 1.3e-41 137.1 11.9 2e-10 39.4 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF132438 - 2.1e-35 121.0 2.9 5.2e-18 65.3 1.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF132438 - 2.8e-31 104.7 5.5 1.5e-09 37.0 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF132438 - 5.8e-31 106.1 10.8 1e-14 54.1 0.7 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF132438 - 8.1e-27 91.5 9.4 2.7e-06 26.6 0.2 4.2 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF132438 - 6.8e-16 58.4 0.2 7.9e-09 35.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF132438 - 3.5e-09 36.5 0.5 0.00026 20.9 0.1 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF132438 - 5.6e-08 33.1 0.3 0.0054 17.0 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF132438 - 2e-07 31.8 0.0 0.00022 22.0 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF132438 - 2.5e-06 27.4 0.0 0.05 13.6 0.0 3.4 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0154) TerB PF05099.13 ORF132438 - 1.8e-05 24.7 0.2 0.1 12.6 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF132438 - 0.00012 22.2 4.0 0.017 15.3 0.3 2.8 2 2 0 2 2 2 2 Dockerin type I domain EFhand_Ca_insen PF08726.10 ORF132438 - 0.00019 21.5 1.1 0.00079 19.5 0.1 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 ORF132438 - 0.00044 21.0 0.4 1.5 9.7 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) Caleosin PF05042.13 ORF132438 - 0.00082 19.3 0.6 0.62 10.0 0.0 3.5 1 1 3 4 4 4 1 Caleosin related protein RNA_pol_Rpb4 PF03874.16 ORF132438 - 0.0034 17.7 0.2 1.8 8.9 0.1 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb4 MotA_activ PF09114.10 ORF132438 - 0.012 15.8 0.1 0.2 11.8 0.0 2.2 2 0 0 2 2 2 0 Transcription factor MotA, activation domain YqeY PF09424.10 ORF132438 - 0.016 15.3 0.4 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 Yqey-like protein DUF1103 PF06513.11 ORF132438 - 0.017 14.7 1.7 0.02 14.5 1.7 1.1 1 0 0 1 1 1 0 Repeat of unknown function (DUF1103) SurA_N_2 PF13623.6 ORF132438 - 0.02 14.7 0.5 1.1 9.1 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain EF-hand_14 PF17959.1 ORF132438 - 0.023 15.0 0.1 12 6.4 0.0 2.9 1 1 2 3 3 3 0 EF-hand domain PB1 PF00564.24 ORF132438 - 0.027 14.4 1.6 8.5 6.4 0.0 3.8 2 2 2 4 4 4 0 PB1 domain DUF5580 PF17743.1 ORF132438 - 0.027 13.0 0.0 0.03 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) Poly_export PF02563.16 ORF132438 - 0.031 14.5 0.1 8.9 6.6 0.0 3.1 1 1 1 3 3 3 0 Polysaccharide biosynthesis/export protein Fe_hyd_lg_C PF02906.14 ORF132438 - 0.054 13.2 0.5 0.16 11.6 0.4 1.8 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain dCache_2 PF08269.11 ORF132438 - 0.086 12.0 0.0 5.6 6.1 0.0 2.1 1 1 0 2 2 2 0 Cache domain DUF853 PF05872.12 ORF132438 - 0.11 11.0 0.1 2.4 6.7 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF4497 PF14924.6 ORF132438 - 0.11 12.9 0.0 8.2 7.0 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4497) SUB1_ProdP9 PF18213.1 ORF132438 - 0.15 11.9 2.6 5.6 6.9 0.1 3.0 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 SapB_1 PF05184.15 ORF132438 - 0.17 11.9 2.6 31 4.7 0.1 3.6 4 0 0 4 4 4 0 Saposin-like type B, region 1 TPR_2 PF07719.17 ORF131487 - 0.001 19.0 0.5 0.0021 18.0 0.5 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF131487 - 0.0088 15.8 0.7 0.024 14.4 0.7 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat Hydrolase_3 PF08282.12 ORF131487 - 0.12 12.1 0.3 0.13 12.0 0.3 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase TPR_8 PF13181.6 ORF131487 - 0.36 11.1 3.3 1.2 9.6 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat Fe_hyd_SSU PF02256.17 ORF131318 - 2.4e-05 24.3 1.4 0.031 14.4 0.1 2.4 2 0 0 2 2 2 2 Iron hydrogenase small subunit Profilin PF00235.19 ORF130200 - 3.9e-13 49.8 0.4 6.3e-13 49.1 0.4 1.3 1 0 0 1 1 1 1 Profilin Asp-Al_Ex PF06826.12 ORF128470 - 1.3e-40 139.0 19.5 1.4e-40 138.8 19.5 1.0 1 0 0 1 1 1 1 Predicted Permease Membrane Region NDUF_B6 PF09782.9 ORF128427 - 0.082 13.0 0.2 0.16 12.1 0.2 1.6 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit E3_UbLigase_RBR PF18091.1 ORF127940 - 0.036 14.2 0.8 0.055 13.6 0.8 1.4 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain ATP-synt_C PF00137.21 ORF127152 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C UPF0731 PF14982.6 ORF127127 - 0.11 12.7 0.6 1.6 8.9 0.0 2.3 2 1 0 2 2 2 0 UPF0731 family Pkinase PF00069.25 ORF126154 - 3.8e-29 101.9 0.0 4.8e-29 101.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF126154 - 3.7e-11 42.8 0.0 4.9e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF126154 - 0.013 14.3 0.0 0.013 14.3 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase zf-RING_2 PF13639.6 ORF126123 - 6e-12 45.7 6.6 8.9e-12 45.1 6.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF126123 - 4.1e-08 33.4 6.7 8.6e-08 32.4 6.7 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF126123 - 2.8e-07 30.3 5.7 5e-07 29.5 5.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF126123 - 8.6e-06 25.4 5.1 8.6e-06 25.4 5.1 1.7 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF126123 - 9.2e-06 25.4 3.0 1.3e-05 24.9 3.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF126123 - 2.1e-05 24.4 3.8 3.8e-05 23.6 3.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF126123 - 4.1e-05 23.4 5.3 7e-05 22.6 5.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF126123 - 0.00097 19.3 5.2 0.0025 17.9 5.2 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain zf-RING_UBOX PF13445.6 ORF126123 - 0.0019 18.2 2.6 0.0041 17.1 0.9 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF126123 - 0.0037 17.3 3.5 0.011 15.8 3.5 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF126123 - 0.0095 15.8 3.2 0.019 14.8 3.3 1.5 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF126123 - 0.012 15.2 4.8 0.019 14.6 4.8 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF126123 - 0.014 15.5 4.8 0.027 14.6 4.7 1.5 1 1 0 1 1 1 0 RING-variant domain zf-RING_4 PF14570.6 ORF126123 - 0.015 15.1 4.0 0.026 14.3 4.0 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Baculo_RING PF05883.11 ORF126123 - 0.028 14.4 1.8 0.061 13.3 1.8 1.6 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-RING-like PF08746.11 ORF126123 - 2.7 8.4 6.9 5.8 7.3 6.9 1.7 1 1 0 1 1 1 0 RING-like domain M-factor PF03855.13 ORF125682 - 0.048 13.8 1.4 0.099 12.8 1.4 1.6 1 0 0 1 1 1 0 M-factor V_ATPase_I PF01496.19 ORF125482 - 0.00084 17.4 1.0 0.0009 17.3 1.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family TSC22 PF01166.18 ORF125482 - 0.0039 17.4 1.0 0.0089 16.3 1.0 1.6 1 0 0 1 1 1 1 TSC-22/dip/bun family DUF4709 PF15821.5 ORF125482 - 0.0053 17.0 5.3 0.0079 16.5 5.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4709) P22_Tail-4 PF11650.8 ORF125482 - 0.0054 16.7 0.1 1.2 9.1 0.1 2.1 1 1 1 2 2 2 1 P22 tail accessory factor UPF0242 PF06785.11 ORF125482 - 0.0076 16.4 9.0 0.0093 16.1 9.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF125482 - 0.0078 15.6 1.1 0.01 15.2 1.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) LPP PF04728.13 ORF125482 - 0.008 16.5 1.7 0.022 15.2 1.7 1.9 1 1 0 1 1 1 1 Lipoprotein leucine-zipper DUF5344 PF17279.2 ORF125482 - 0.0082 16.7 2.7 0.017 15.6 2.7 1.5 1 1 0 1 1 1 1 Family of unknown function (DUF5344) TMCO5 PF14992.6 ORF125482 - 0.011 15.4 6.9 0.013 15.1 6.9 1.1 1 0 0 1 1 1 0 TMCO5 family ACCA PF03255.14 ORF125482 - 0.02 14.8 1.7 0.033 14.1 1.7 1.4 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SHE3 PF17078.5 ORF125482 - 0.021 14.5 6.4 0.028 14.2 6.4 1.1 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 Prominin PF05478.11 ORF125482 - 0.048 11.6 1.2 0.055 11.4 1.2 1.0 1 0 0 1 1 1 0 Prominin K-box PF01486.17 ORF125482 - 0.052 13.7 3.8 0.052 13.7 3.8 2.1 2 0 0 2 2 2 0 K-box region Asp-B-Hydro_N PF05279.11 ORF125482 - 0.057 13.5 6.5 0.068 13.2 6.5 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region FapA PF03961.13 ORF125482 - 0.063 11.9 2.1 0.074 11.7 2.1 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Rho_Binding PF08912.11 ORF125482 - 0.1 13.4 6.8 0.15 12.9 6.4 1.6 1 1 0 1 1 1 0 Rho Binding FlaC_arch PF05377.11 ORF125482 - 0.11 12.9 1.0 0.11 12.9 1.0 2.1 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF4972 PF16342.5 ORF125482 - 0.12 12.1 1.3 0.35 10.5 1.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4972) DUF724 PF05266.14 ORF125482 - 0.13 12.0 6.0 0.18 11.6 6.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Sds3 PF08598.11 ORF125482 - 0.17 11.9 10.4 0.24 11.4 10.4 1.1 1 0 0 1 1 1 0 Sds3-like CK2S PF15011.6 ORF125482 - 0.18 11.7 5.3 0.46 10.4 5.3 1.7 1 1 0 1 1 1 0 Casein Kinase 2 substrate XhlA PF10779.9 ORF125482 - 0.22 11.8 7.7 0.21 11.8 1.4 2.6 2 1 0 2 2 2 0 Haemolysin XhlA YabA PF06156.13 ORF125482 - 0.23 12.1 4.6 0.37 11.5 4.6 1.4 1 0 0 1 1 1 0 Initiation control protein YabA Cep57_CLD_2 PF14197.6 ORF125482 - 0.29 11.3 7.9 0.31 11.2 6.8 1.6 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 Atg14 PF10186.9 ORF125482 - 0.41 9.7 4.0 0.49 9.4 4.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 ORF125482 - 0.65 10.2 5.1 1.5 9.0 5.4 1.4 2 0 0 2 2 1 0 Fibrinogen alpha/beta chain family Ax_dynein_light PF10211.9 ORF125482 - 1.2 9.1 10.5 1.8 8.5 10.5 1.4 1 1 0 1 1 1 0 Axonemal dynein light chain DivIC PF04977.15 ORF125482 - 1.8 8.4 9.7 0.7 9.7 5.5 2.2 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 ORF125482 - 2.4 7.3 5.0 3.1 7.0 5.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein Tup_N PF08581.10 ORF125482 - 3.8 7.9 13.4 0.7 10.2 7.5 2.1 1 1 1 2 2 2 0 Tup N-terminal HIP1_clath_bdg PF16515.5 ORF125482 - 4.6 7.9 13.1 21 5.8 13.2 1.8 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 OmpH PF03938.14 ORF125482 - 4.9 7.5 13.7 15 5.9 13.8 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) TolA_bind_tri PF16331.5 ORF125482 - 9.1 6.4 14.3 1.1 9.4 7.0 2.3 1 1 1 2 2 2 0 TolA binding protein trimerisation Condensin2nSMC PF12422.8 ORF125443 - 0.11 12.6 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Condensin II non structural maintenance of chromosomes subunit Patched PF02460.18 ORF123712 - 0.033 12.3 0.0 0.037 12.1 0.0 1.0 1 0 0 1 1 1 0 Patched family ParBc PF02195.18 ORF121653 - 0.076 13.3 0.0 1.3 9.3 0.0 2.2 1 1 1 2 2 2 0 ParB-like nuclease domain RAP1 PF07218.11 ORF121465 - 0.055 11.8 23.6 0.057 11.7 23.6 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) HSD3 PF15244.6 ORF121465 - 0.25 10.8 23.4 0.35 10.3 23.4 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 7, or HSD3 Macoilin PF09726.9 ORF121465 - 0.28 9.7 24.3 0.31 9.5 24.3 1.1 1 0 0 1 1 1 0 Macoilin family FAM199X PF15814.5 ORF121465 - 0.4 9.7 20.7 0.47 9.5 20.7 1.1 1 0 0 1 1 1 0 Protein family FAM199X Apt1 PF10351.9 ORF121465 - 0.82 8.4 21.6 0.95 8.2 21.6 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Miga PF10265.9 ORF121465 - 0.9 8.4 14.8 1.1 8.2 14.8 1.2 1 0 0 1 1 1 0 Mitoguardin Menin PF05053.13 ORF121465 - 2.3 6.5 11.3 2.5 6.4 11.3 1.1 1 0 0 1 1 1 0 Menin DUF4698 PF15769.5 ORF121465 - 4.6 6.2 16.7 5.2 6.0 16.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4698) ALMT PF11744.8 ORF121465 - 5.1 5.8 14.1 5.8 5.6 14.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter EF-hand_7 PF13499.6 ORF120403 - 8.7e-10 38.9 2.2 5.7e-06 26.7 0.9 2.4 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF120403 - 1e-09 37.2 4.6 1.8e-05 24.0 2.6 3.8 4 0 0 4 4 4 2 EF hand EF-hand_8 PF13833.6 ORF120403 - 1.6e-09 37.4 5.2 0.0004 20.2 0.0 3.4 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF120403 - 1.9e-08 34.5 0.1 0.00014 22.1 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_6 PF13405.6 ORF120403 - 3.8e-06 26.4 3.6 0.00012 21.8 1.3 3.2 3 0 0 3 3 3 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF120403 - 0.0012 19.2 0.1 0.021 15.1 0.0 2.1 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_5 PF13202.6 ORF120403 - 0.0023 17.3 2.0 0.0039 16.6 0.7 2.2 2 0 0 2 2 2 1 EF hand Arm_3 PF16186.5 ORF120095 - 1.3e-11 43.9 1.6 2.8e-11 42.8 1.6 1.6 1 0 0 1 1 1 1 Atypical Arm repeat Arm PF00514.23 ORF120095 - 0.00018 21.4 0.1 0.18 11.9 0.0 3.1 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat CreA PF05981.12 ORF120095 - 0.021 14.8 0.2 0.049 13.6 0.0 1.7 1 1 0 1 1 1 0 CreA protein Chlorophyllase2 PF12740.7 ORF120095 - 0.071 12.0 0.0 0.097 11.6 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme KAsynt_C_assoc PF16197.5 ORF120048 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF120048 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF120048 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family Pkinase PF00069.25 ORF11971 - 9.3e-23 80.9 0.3 1e-22 80.8 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF11971 - 1e-16 61.0 0.0 1.2e-16 60.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF11971 - 0.0021 18.0 0.0 0.2 11.5 0.0 2.0 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF11971 - 0.012 14.7 0.1 0.036 13.0 0.1 1.7 2 0 0 2 2 2 0 Poxvirus serine/threonine protein kinase Kdo PF06293.14 ORF11971 - 0.084 12.2 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family CitMHS PF03600.16 ORF11867 - 0.053 12.7 0.1 0.056 12.6 0.1 1.1 1 0 0 1 1 1 0 Citrate transporter Aminotran_3 PF00202.21 ORF117773 - 3e-13 49.2 0.0 3.6e-13 48.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III PH PF00169.29 ORF116022 - 3.1e-13 50.1 0.0 3.8e-13 49.9 0.0 1.1 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF116022 - 0.0013 19.2 0.4 0.0023 18.3 0.4 1.6 1 1 0 1 1 1 1 Pleckstrin homology domain PH_8 PF15409.6 ORF116022 - 0.015 15.5 0.1 0.07 13.4 0.1 1.9 1 1 0 1 1 1 0 Pleckstrin homology domain MerB PF03243.15 ORF115495 - 0.029 14.5 0.0 0.041 14.0 0.0 1.3 1 0 0 1 1 1 0 Alkylmercury lyase FUSC_2 PF13515.6 ORF114465 - 0.0009 19.4 3.6 0.0009 19.4 3.6 2.0 1 1 0 2 2 2 1 Fusaric acid resistance protein-like PsbH PF00737.20 ORF1140 - 7.8e-07 28.7 0.4 1.4e-06 27.9 0.4 1.4 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 ORF1140 - 0.043 13.5 1.6 0.066 12.9 0.4 1.7 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF1140 - 0.063 13.7 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized Ycf70-like ATP-synt_B PF00430.18 ORF113724 - 1.4e-10 41.3 19.5 3.1e-09 37.0 19.5 2.0 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) V-ATPase_G PF03179.15 ORF113724 - 0.0084 16.6 17.3 0.011 16.2 17.3 1.2 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit Spore_III_AF PF09581.10 ORF113724 - 0.022 14.8 3.9 0.034 14.2 3.9 1.3 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) ApoLp-III PF07464.11 ORF113724 - 0.034 14.2 13.2 0.067 13.3 12.0 1.7 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Neur_chan_memb PF02932.16 ORF113724 - 0.056 13.5 0.2 0.069 13.2 0.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3584 PF12128.8 ORF113724 - 0.091 10.3 12.5 0.11 10.0 12.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Prominin PF05478.11 ORF113724 - 0.12 10.3 2.7 0.15 10.0 2.7 1.1 1 0 0 1 1 1 0 Prominin DUF4569 PF15133.6 ORF113724 - 0.19 11.4 2.8 0.28 10.9 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4569) Phage_TAC_4 PF08748.11 ORF113724 - 0.25 11.7 7.5 0.35 11.2 7.5 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone DUF4407 PF14362.6 ORF113724 - 0.41 9.9 9.5 0.55 9.5 9.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Apolipoprotein PF01442.18 ORF113724 - 0.48 10.3 18.5 1.9 8.3 11.8 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Mt_ATP-synt_B PF05405.14 ORF113724 - 0.49 10.0 9.4 0.37 10.4 7.7 1.5 1 1 1 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF2228 PF10228.9 ORF113724 - 0.82 9.4 6.2 1.1 9.0 4.6 1.7 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2228) CDC73_N PF16050.5 ORF113724 - 1.2 8.4 10.3 1.4 8.2 10.3 1.1 1 0 0 1 1 1 0 Paf1 complex subunit CDC73 N-terminal OTU PF02338.19 ORF113724 - 1.2 9.6 3.8 1.6 9.3 0.4 2.0 1 1 1 2 2 2 0 OTU-like cysteine protease Hid1 PF12722.7 ORF113724 - 1.4 6.9 4.1 2 6.4 4.1 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF3138 PF11336.8 ORF113724 - 1.6 7.3 4.4 1.9 7.0 4.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Presenilin PF01080.17 ORF113724 - 2 7.1 7.2 2.5 6.8 7.2 1.1 1 0 0 1 1 1 0 Presenilin DUF1682 PF07946.14 ORF113724 - 2.2 7.4 14.6 2.7 7.1 14.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Nup88 PF10168.9 ORF113724 - 3 5.5 9.0 3.7 5.2 9.0 1.0 1 0 0 1 1 1 0 Nuclear pore component TMPIT PF07851.13 ORF113724 - 3.5 6.8 6.5 4.6 6.4 6.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks152.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks152.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks152.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks152.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GreA_GreB_N PF03449.15 ORF111409 - 0.056 13.6 0.7 0.11 12.7 0.7 1.5 1 0 0 1 1 1 0 Transcription elongation factor, N-terminal DUF932 PF06067.11 ORF111409 - 0.12 12.1 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF932) FapA PF03961.13 ORF111165 - 0.0061 15.2 1.4 0.0067 15.1 1.4 1.2 1 0 0 1 1 1 1 Flagellar Assembly Protein A DASH_Dad4 PF08650.10 ORF111165 - 0.0094 15.9 0.2 0.025 14.5 0.2 1.8 1 0 0 1 1 1 1 DASH complex subunit Dad4 RestrictionMunI PF11407.8 ORF111165 - 0.035 13.8 0.4 0.057 13.1 0.3 1.4 1 1 0 1 1 1 0 Type II restriction enzyme MunI PHB_depo_C PF06850.11 ORF111165 - 0.12 11.8 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 PHB de-polymerase C-terminus Ribosomal_L11_N PF03946.14 ORF110740 - 2.7e-17 62.3 1.3 4.7e-17 61.6 1.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF110740 - 2.3e-15 56.9 0.1 3.7e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Acetyltransf_1 PF00583.25 ORF109910 - 1.2e-11 44.9 0.0 1.4e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF109910 - 3e-09 36.9 0.0 3.6e-09 36.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF109910 - 0.00071 20.0 0.0 0.0011 19.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF109910 - 0.00086 19.2 0.0 0.002 18.0 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 ORF109910 - 0.0038 17.9 0.0 0.0044 17.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF109910 - 0.018 14.7 0.0 0.024 14.3 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DSPc PF00782.20 ORF109789 - 1.1e-12 47.9 0.0 1.4e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF109789 - 0.2 11.2 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Ribosomal_L11_N PF03946.14 ORF10932 - 2.4e-17 62.5 1.2 4.3e-17 61.7 1.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF10932 - 2.2e-15 56.9 0.1 3.7e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain DUF1211 PF06736.11 ORF108945 - 0.024 15.1 0.1 0.038 14.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) MmcB-like PF06319.12 ORF108923 - 0.21 11.2 0.0 0.32 10.7 0.0 1.2 1 0 0 1 1 1 0 DNA repair protein MmcB-like TetR_C_7 PF14246.6 ORF108840 - 0.0029 17.6 0.8 0.0049 16.9 0.8 1.3 1 0 0 1 1 1 1 AefR-like transcriptional repressor, C-terminal domain Apolipoprotein PF01442.18 ORF108840 - 0.0055 16.6 0.1 2.7 7.8 0.0 2.0 2 0 0 2 2 2 2 Apolipoprotein A1/A4/E domain Phasin_2 PF09361.10 ORF108840 - 0.0074 16.5 3.1 0.014 15.6 0.6 2.1 2 0 0 2 2 2 1 Phasin protein DUF948 PF06103.11 ORF108840 - 0.014 15.7 1.7 0.12 12.7 0.2 2.2 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) ApoLp-III PF07464.11 ORF108840 - 0.088 12.9 0.1 3 7.9 0.1 2.1 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) WXG100 PF06013.12 ORF108840 - 0.15 12.3 3.5 1 9.6 0.5 2.5 2 1 0 2 2 2 0 Proteins of 100 residues with WXG T7SS_ESX_EspC PF10824.8 ORF108840 - 1.7 9.2 9.3 2.5 8.7 0.4 2.2 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm PAP_fibrillin PF04755.12 ORF107942 - 0.0013 18.7 0.1 0.083 12.8 0.1 2.1 2 0 0 2 2 2 2 PAP_fibrillin SR-25 PF10500.9 ORF104534 - 0.031 13.9 4.9 0.042 13.5 4.9 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein ABC_tran PF00005.27 ORF104160 - 7.4e-16 58.9 0.0 1e-15 58.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF104160 - 5e-05 22.8 0.4 7.4e-05 22.3 0.4 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TPD PF14811.6 ORF104160 - 0.0063 16.4 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif DMP12 PF16779.5 ORF104160 - 0.033 14.2 0.8 0.059 13.4 0.8 1.5 1 1 0 1 1 1 0 DNA-mimic protein FKBP_N_2 PF18023.1 ORF104160 - 0.091 12.9 0.3 0.13 12.3 0.3 1.3 1 0 0 1 1 1 0 BDBT FKBP like N-terminal KAsynt_C_assoc PF16197.5 ORF102487 - 0.058 13.8 2.0 0.084 13.3 1.4 1.6 1 1 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension ENTH PF01417.20 ORF102487 - 0.076 13.1 4.1 0.11 12.6 1.3 2.0 2 0 0 2 2 2 0 ENTH domain Gastrin PF00918.17 ORF102487 - 1.6 9.8 4.6 2.5 9.1 4.5 1.6 1 1 0 1 1 1 0 Gastrin/cholecystokinin family ATP-synt_C PF00137.21 ORF101561 - 3.4e-32 110.6 34.2 6.1e-21 74.5 13.2 2.4 3 0 0 3 3 3 2 ATP synthase subunit C Rubredoxin_2 PF18073.1 ORF101273 - 1.2 8.9 0.0 1.2 8.9 0.0 3.6 5 0 0 5 5 5 0 Rubredoxin metal binding domain LAGLIDADG_1 PF00961.19 NODE_41913_length_487_cov_2.252212_g34328_i0reverse_frame_1 - 5.7 8.0 7.9 3.1 8.8 0.8 2.5 1 1 1 2 2 2 0 LAGLIDADG endonuclease HNF-1B_C PF04812.13 NODE_41907_length_487_cov_3.871681_g34322_i0reverse_frame_1 - 0.073 12.9 2.2 0.094 12.5 2.2 1.2 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus AstB PF04996.12 NODE_41906_length_487_cov_4.207965_g34321_i0reverse_frame_1 - 0.29 9.8 0.3 0.36 9.4 0.3 1.1 1 0 0 1 1 1 0 Succinylarginine dihydrolase Bee_toxin PF17454.2 NODE_41895_length_487_cov_73.535398_g34310_i0forward_frame_1 - 1.3 9.1 8.5 1.4 9.0 0.4 2.4 1 1 1 2 2 2 0 Honey bee toxin zinc_ribbon_4 PF13717.6 NODE_41889_length_487_cov_86.258850_g34304_i0reverse_frame_1 - 0.24 11.4 2.3 0.48 10.4 0.5 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF2534 PF10749.9 NODE_41888_length_487_cov_89.013274_g34303_i0forward_frame_1 - 0.05 13.8 0.1 2.7 8.2 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2534) RskA PF10099.9 NODE_41885_length_487_cov_99.438053_g34300_i0reverse_frame_1 - 0.051 13.9 4.7 0.061 13.6 4.7 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA NUFIP2 PF15293.6 NODE_41885_length_487_cov_99.438053_g34300_i0reverse_frame_1 - 0.49 9.2 0.7 0.62 8.9 0.7 1.0 1 0 0 1 1 1 0 Nuclear fragile X mental retardation-interacting protein 2 Staph_opine_DH PF10100.9 NODE_41868_length_487_cov_191.787611_g34283_i0forward_frame_1 - 0.021 13.5 0.0 0.029 13.0 0.0 1.2 1 0 0 1 1 1 0 Staphylopine dehydrogenase Conotoxin PF02950.17 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.005 17.8 0.1 0.005 17.8 0.1 2.0 2 0 0 2 2 2 1 Conotoxin EphA2_TM PF14575.6 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.02 15.8 0.4 0.02 15.8 0.4 2.4 3 1 0 3 3 2 0 Ephrin type-A receptor 2 transmembrane domain WBP-1 PF11669.8 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.032 14.9 1.5 0.032 14.9 1.5 2.1 1 1 2 3 3 3 0 WW domain-binding protein 1 TMEM51 PF15345.6 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.038 13.8 0.9 0.057 13.3 0.9 1.3 1 0 0 1 1 1 0 Transmembrane protein 51 DUF4834 PF16118.5 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.057 14.4 0.6 0.057 14.4 0.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Chordopox_A13L PF05961.11 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.059 13.6 0.2 0.059 13.6 0.2 2.0 3 0 0 3 3 1 0 Chordopoxvirus A13L protein ECSCR PF15820.5 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.071 12.9 0.7 0.071 12.9 0.7 2.2 3 0 0 3 3 3 0 Endothelial cell-specific chemotaxis regulator FSAP_sig_propep PF03032.15 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.13 12.3 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide BatD PF13584.6 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.14 10.9 0.2 0.16 10.7 0.2 1.1 1 0 0 1 1 1 0 Oxygen tolerance Shisa PF13908.6 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.23 11.7 0.9 0.3 11.3 0.3 1.6 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator MLANA PF14991.6 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.87 9.9 3.9 7 7.0 0.5 2.2 1 1 0 2 2 2 0 Protein melan-A CcmD PF04995.14 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 0.9 9.7 7.6 4.4 7.5 7.6 2.2 1 1 0 1 1 1 0 Heme exporter protein D (CcmD) DUF5313 PF17240.2 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 1.3 9.5 6.6 0.21 12.0 2.4 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5313) HemY_N PF07219.13 NODE_41852_length_488_cov_1.412804_g34268_i0forward_frame_1 - 2.6 8.3 5.3 0.49 10.6 1.0 1.9 2 0 0 2 2 2 0 HemY protein N-terminus TraI_2 PF07514.11 NODE_41850_length_488_cov_2.105960_g34266_i0reverse_frame_1 - 0.027 13.4 1.6 0.035 13.0 1.6 1.1 1 0 0 1 1 1 0 Putative helicase Peroxin-13_N PF04088.13 NODE_41844_length_488_cov_3.370861_g34260_i0reverse_frame_1 - 0.083 13.2 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Peroxin 13, N-terminal region Strumpellin PF10266.9 NODE_41843_length_488_cov_3.684327_g34259_i0forward_frame_1 - 9e-44 149.5 11.1 1e-43 149.4 11.1 1.0 1 0 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin OKR_DC_1_N PF03709.15 NODE_41843_length_488_cov_3.684327_g34259_i0forward_frame_1 - 0.013 15.7 0.5 0.03 14.6 0.2 1.7 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain HGD-D PF06050.13 NODE_41841_length_488_cov_3.935982_g34257_i0forward_frame_1 - 0.091 12.5 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component Glyco_hydro_16 PF00722.21 NODE_41827_length_488_cov_89.172185_g34243_i0forward_frame_1 - 4.4e-07 29.5 0.1 5.3e-07 29.3 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 DUF5336 PF17270.2 NODE_41814_length_488_cov_147.496689_g34230_i0forward_frame_1 - 0.027 14.1 0.1 0.046 13.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5336) GCHY-1 PF02649.14 NODE_41813_length_488_cov_159.099338_g26964_i1reverse_frame_1 - 0.33 10.4 1.8 0.35 10.3 1.8 1.2 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 Ank_2 PF12796.7 NODE_41813_length_488_cov_159.099338_g26964_i1forward_frame_1 - 1.9e-29 102.1 0.1 2.9e-14 53.4 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_41813_length_488_cov_159.099338_g26964_i1forward_frame_1 - 1.1e-27 96.0 1.2 6.7e-10 39.3 0.0 3.2 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 NODE_41813_length_488_cov_159.099338_g26964_i1forward_frame_1 - 1.2e-19 69.8 2.2 2.7e-07 30.7 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 NODE_41813_length_488_cov_159.099338_g26964_i1forward_frame_1 - 8.7e-19 67.4 4.0 1.5e-08 34.8 0.4 4.1 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_41813_length_488_cov_159.099338_g26964_i1forward_frame_1 - 5.9e-14 50.8 0.0 0.003 17.9 0.0 3.8 4 0 0 4 4 4 3 Ankyrin repeat DUF5336 PF17270.2 NODE_41813_length_488_cov_159.099338_g26964_i1forward_frame_1 - 0.043 13.5 0.2 3.9 7.1 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5336) YacG PF03884.14 NODE_41804_length_488_cov_346.958057_g32043_i1forward_frame_1 - 0.031 14.0 2.2 0.36 10.6 0.1 2.7 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG Saf_2TM PF18303.1 NODE_41786_length_489_cov_2.572687_g34209_i0forward_frame_1 - 6.2 6.4 5.8 16 5.1 0.1 2.4 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain DUF1474 PF07342.11 NODE_41784_length_489_cov_2.700441_g34207_i0reverse_frame_1 - 0.65 10.6 6.2 0.75 10.3 3.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1474) Beach PF02138.18 NODE_41780_length_489_cov_3.444934_g34203_i0reverse_frame_1 - 8.5e-45 153.3 0.0 9.7e-45 153.1 0.0 1.0 1 0 0 1 1 1 1 Beige/BEACH domain Cupin_6 PF12852.7 NODE_41776_length_489_cov_39.079295_g34199_i0reverse_frame_1 - 0.062 13.0 0.0 0.14 11.8 0.0 1.6 2 0 0 2 2 2 0 Cupin DUF4199 PF13858.6 NODE_41774_length_489_cov_51.951542_g34197_i0forward_frame_1 - 2.2 8.7 15.9 4.2 7.7 15.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) Claudin_3 PF06653.11 NODE_41774_length_489_cov_51.951542_g34197_i0forward_frame_1 - 7.2 6.5 15.5 0.61 10.0 8.6 2.0 2 0 0 2 2 2 0 Tight junction protein, Claudin-like Synaptobrevin PF00957.21 NODE_41772_length_489_cov_61.645374_g34195_i0reverse_frame_1 - 0.15 11.9 2.3 0.56 10.0 0.2 2.1 2 0 0 2 2 2 0 Synaptobrevin vMSA PF00695.19 NODE_41772_length_489_cov_61.645374_g34195_i0reverse_frame_1 - 0.2 10.7 1.6 0.23 10.5 1.6 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus SURF6 PF04935.12 NODE_41769_length_489_cov_70.746696_g34192_i0reverse_frame_1 - 2.1e-18 66.9 33.0 2.7e-18 66.5 33.0 1.2 1 0 0 1 1 1 1 Surfeit locus protein 6 Ank_5 PF13857.6 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 5.5e-25 87.1 0.1 2.5e-12 46.8 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 1.4e-23 83.0 0.1 2.5e-08 34.3 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 4.5e-20 72.0 1.0 2.1e-19 69.9 0.3 2.1 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 2.4e-17 62.5 0.3 1.2e-06 28.7 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 NODE_41759_length_489_cov_122.495595_g34182_i0forward_frame_1 - 1.9e-13 49.3 0.1 6.7e-05 23.0 0.0 3.7 5 0 0 5 5 5 2 Ankyrin repeat MORN PF02493.20 NODE_41757_length_489_cov_125.068282_g34180_i0forward_frame_1 - 4.2e-14 51.5 13.2 1.6e-07 30.8 0.3 4.5 5 0 0 5 5 5 2 MORN repeat PATR PF12951.7 NODE_41757_length_489_cov_125.068282_g34180_i0forward_frame_1 - 0.08 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Passenger-associated-transport-repeat WHEP-TRS PF00458.20 NODE_41747_length_489_cov_451.033040_g28675_i2forward_frame_1 - 0.015 15.4 0.9 0.038 14.1 0.9 1.6 1 0 0 1 1 1 0 WHEP-TRS domain Pox_E10 PF04805.12 NODE_41747_length_489_cov_451.033040_g28675_i2forward_frame_1 - 0.029 14.2 0.6 4.4 7.2 0.1 2.3 2 0 0 2 2 2 0 E10-like protein conserved region Ac76 PF05814.11 NODE_41747_length_489_cov_451.033040_g28675_i2forward_frame_1 - 0.38 10.8 2.4 0.46 10.5 0.1 1.9 2 0 0 2 2 2 0 Orf76 (Ac76) STAT6_C PF14596.6 NODE_41744_length_489_cov_842.894273_g34168_i0reverse_frame_1 - 0.08 12.9 1.6 0.13 12.2 1.4 1.3 1 1 0 1 1 1 0 STAT6 C-terminal Ammonium_transp PF00909.21 NODE_41738_length_489_cov_3437.466960_g34163_i0reverse_frame_1 - 6.2e-07 28.5 0.0 9e-07 27.9 0.0 1.3 1 0 0 1 1 1 1 Ammonium Transporter Family DUF3767 PF12597.8 NODE_41738_length_489_cov_3437.466960_g34163_i0reverse_frame_1 - 1.6 8.6 5.5 0.68 9.8 2.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) DGF-1_C PF11040.8 NODE_41736_length_489_cov_4092.724670_g25447_i4forward_frame_1 - 5.5 7.1 9.3 0.99 9.5 5.3 1.7 1 1 1 2 2 2 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus Rieske PF00355.26 NODE_41735_length_489_cov_5133.367841_g34161_i0forward_frame_1 - 7.9e-13 48.2 0.1 1.1e-12 47.7 0.1 1.2 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain CytB6-F_Fe-S PF08802.10 NODE_41735_length_489_cov_5133.367841_g34161_i0forward_frame_1 - 1.5e-06 28.1 1.2 2.7e-06 27.3 1.2 1.5 1 0 0 1 1 1 1 Cytochrome B6-F complex Fe-S subunit Presenilin PF01080.17 NODE_41726_length_490_cov_23.092308_g34152_i0reverse_frame_2 - 0.38 9.5 3.1 0.48 9.1 3.1 1.1 1 0 0 1 1 1 0 Presenilin Rx_N PF18052.1 NODE_41720_length_490_cov_59.518681_g34146_i0forward_frame_3 - 0.088 13.1 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Rx N-terminal domain DUF2284 PF10050.9 NODE_41717_length_490_cov_67.859341_g34143_i0forward_frame_2 - 1.7 8.3 5.6 0.61 9.8 2.1 1.8 1 1 1 2 2 2 0 Predicted metal-binding protein (DUF2284) DUF2164 PF09932.9 NODE_41715_length_490_cov_81.345055_g34141_i0forward_frame_3 - 0.045 13.8 0.0 0.14 12.2 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2164) DUF4492 PF14899.6 NODE_41712_length_490_cov_86.492308_g34138_i0reverse_frame_2 - 0.018 15.0 0.0 0.03 14.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4492) PAC4 PF16093.5 NODE_41711_length_490_cov_98.101099_g34137_i0reverse_frame_3 - 5.8e-12 45.6 0.0 8.4e-12 45.1 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 PRY PF13765.6 NODE_41711_length_490_cov_98.101099_g34137_i0reverse_frame_3 - 0.15 11.7 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 SPRY-associated domain DUF4553 PF15090.6 NODE_41711_length_490_cov_98.101099_g34137_i0forward_frame_2 - 0.038 13.0 0.4 0.043 12.8 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4553) DUF4644 PF15486.6 NODE_41706_length_490_cov_108.984615_g34132_i0reverse_frame_3 - 0.087 12.6 0.2 0.13 12.1 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4644) Pheromone PF08015.11 NODE_41690_length_490_cov_384.934066_g34117_i0reverse_frame_2 - 0.31 12.1 3.7 0.13 13.4 1.0 1.9 2 0 0 2 2 2 0 Fungal mating-type pheromone DUF423 PF04241.15 NODE_41690_length_490_cov_384.934066_g34117_i0forward_frame_3 - 3.4e-21 75.2 0.9 6.4e-21 74.3 0.9 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF423) Actin PF00022.19 NODE_41678_length_491_cov_1.603070_g34108_i0reverse_frame_3 - 2.8e-42 144.8 0.2 4.2e-41 140.9 0.2 1.9 1 1 0 1 1 1 1 Actin Wyosine_form PF08608.12 NODE_41678_length_491_cov_1.603070_g34108_i0reverse_frame_3 - 0.11 12.9 0.1 0.2 12.1 0.1 1.4 1 0 0 1 1 1 0 Wyosine base formation DUF5057 PF16480.5 NODE_41676_length_491_cov_1.925439_g34106_i0reverse_frame_2 - 0.041 13.2 0.1 0.059 12.7 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5057) Peptidase_M3 PF01432.20 NODE_41674_length_491_cov_2.307018_g34104_i0forward_frame_2 - 5.6e-49 167.6 0.0 6.2e-49 167.5 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 AKAP7_NLS PF10469.9 NODE_41673_length_491_cov_2.675439_g34103_i0reverse_frame_3 - 0.00088 19.2 0.3 0.0011 18.9 0.3 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain GATase_7 PF13537.6 NODE_41671_length_491_cov_3.989035_g34101_i0reverse_frame_3 - 2.8e-12 46.6 0.0 3.8e-12 46.2 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 NODE_41671_length_491_cov_3.989035_g34101_i0reverse_frame_3 - 2.2e-09 37.6 0.0 3.8e-09 36.8 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 NODE_41671_length_491_cov_3.989035_g34101_i0reverse_frame_3 - 0.16 10.9 0.0 0.16 10.8 0.0 1.3 1 1 0 1 1 1 0 Glutamine amidotransferases class-II DUF962 PF06127.11 NODE_41668_length_491_cov_42.070175_g34098_i0forward_frame_2 - 0.092 12.8 1.3 0.31 11.2 0.1 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF962) Fumarate_red_C PF02300.17 NODE_41666_length_491_cov_56.311404_g34096_i0forward_frame_3 - 0.087 12.9 2.9 3.1 7.9 0.3 2.8 2 1 1 3 3 3 0 Fumarate reductase subunit C DUF3708 PF12501.8 NODE_41656_length_491_cov_85.629386_g34086_i0reverse_frame_3 - 0.18 11.6 1.7 0.17 11.6 0.6 1.5 1 1 0 1 1 1 0 Phosphate ATP-binding cassette transporter Baculo_PP31 PF05311.11 NODE_41656_length_491_cov_85.629386_g34086_i0reverse_frame_3 - 0.45 10.0 4.0 0.15 11.6 0.9 1.7 2 0 0 2 2 2 0 Baculovirus 33KDa late protein (PP31) TPT PF03151.16 NODE_41652_length_491_cov_99.100877_g34082_i0forward_frame_2 - 3.3e-14 52.9 3.0 4.4e-14 52.5 3.0 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family UAA PF08449.11 NODE_41652_length_491_cov_99.100877_g34082_i0forward_frame_2 - 0.00025 20.4 3.6 0.00031 20.0 3.6 1.1 1 0 0 1 1 1 1 UAA transporter family Peptidase_C16 PF01831.17 NODE_41652_length_491_cov_99.100877_g34082_i0forward_frame_2 - 0.036 13.8 0.1 0.043 13.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase C16 family EamA PF00892.20 NODE_41652_length_491_cov_99.100877_g34082_i0forward_frame_2 - 0.05 13.8 4.2 0.071 13.3 4.2 1.2 1 0 0 1 1 1 0 EamA-like transporter family EccE PF11203.8 NODE_41648_length_491_cov_112.967105_g34078_i0reverse_frame_3 - 0.0067 16.7 0.5 0.0096 16.2 0.5 1.5 1 1 0 1 1 1 1 Putative type VII ESX secretion system translocon, EccE eIF3_subunit PF08597.10 NODE_41634_length_491_cov_313.640351_g34064_i0forward_frame_3 - 0.0046 16.9 3.9 0.0067 16.4 3.9 1.2 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit DUF5340 PF17275.2 NODE_41634_length_491_cov_313.640351_g34064_i0forward_frame_3 - 0.19 11.9 3.2 0.42 10.8 3.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5340) Baculo_PEP_C PF04513.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 2e-05 24.6 7.4 0.033 14.2 0.6 2.8 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus Syntaxin_2 PF14523.6 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 2.5e-05 24.6 21.4 0.0025 18.1 8.3 3.0 1 1 2 3 3 3 2 Syntaxin-like protein Apolipoprotein PF01442.18 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.00055 19.9 4.0 0.0052 16.7 2.4 1.9 1 1 1 2 2 2 1 Apolipoprotein A1/A4/E domain DUF883 PF05957.13 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.00065 20.2 1.3 6.2 7.5 0.0 3.2 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF5082 PF16888.5 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.0032 17.8 19.9 0.12 12.6 14.6 2.4 1 1 1 2 2 2 2 Domain of unknown function (DUF5082) FH2 PF02181.23 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.0054 15.9 8.7 1.1 8.4 6.4 2.2 1 1 0 2 2 2 2 Formin Homology 2 Domain FlxA PF14282.6 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.0078 16.2 5.7 0.0078 16.2 5.7 3.4 1 1 2 3 3 3 1 FlxA-like protein Syntaxin-6_N PF09177.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.018 15.6 7.7 1 10.0 5.0 3.0 1 1 2 3 3 3 0 Syntaxin 6, N-terminal Fib_alpha PF08702.10 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.02 15.1 17.3 0.41 10.8 10.1 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Phage_GPO PF05929.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.02 14.5 6.5 0.024 14.3 6.5 1.3 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase KxDL PF10241.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.021 15.1 10.8 0.073 13.3 0.1 2.8 1 1 1 2 2 2 0 Uncharacterized conserved protein Spc7 PF08317.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.029 13.2 16.4 0.18 10.6 14.8 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein TMP_2 PF06791.13 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.03 14.0 0.4 0.055 13.1 0.2 1.6 1 1 1 2 2 2 0 Prophage tail length tape measure protein Lectin_N PF03954.14 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.046 13.5 6.0 1.4 8.6 2.6 2.4 1 1 0 2 2 2 0 Hepatic lectin, N-terminal domain DUF2397 PF09660.10 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.047 12.6 0.3 0.12 11.2 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2397) Syntaxin PF00804.25 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.059 13.0 15.8 0.086 12.5 13.0 2.3 1 1 1 2 2 2 0 Syntaxin SpecificRecomb PF10136.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.065 11.5 0.9 0.063 11.6 0.9 1.1 1 0 0 1 1 1 0 Site-specific recombinase DUF948 PF06103.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.083 13.2 11.3 0.33 11.3 0.5 3.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Exonuc_VII_L PF02601.15 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.089 12.3 7.7 0.13 11.8 7.7 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit ApoLp-III PF07464.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.12 12.5 17.1 1.1 9.4 17.1 2.3 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Prominin PF05478.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.12 10.3 12.4 0.15 10.0 12.4 1.1 1 0 0 1 1 1 0 Prominin Allexi_40kDa PF05549.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.17 11.4 9.1 0.084 12.4 1.6 2.0 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF848 PF05852.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.17 12.0 10.5 0.25 11.5 0.2 2.6 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) DLP_helical PF18709.1 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.2 10.8 13.3 0.42 9.8 6.7 2.1 1 1 1 2 2 2 0 Dynamin-like helical domain COG2 PF06148.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.21 11.7 9.0 0.25 11.4 2.5 2.9 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Alpha-E PF04168.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.27 11.0 1.5 3.2 7.4 1.5 2.0 1 1 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. ING PF12998.7 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.28 11.8 13.0 2.2 8.9 2.2 2.9 1 1 2 3 3 3 0 Inhibitor of growth proteins N-terminal histone-binding TMPIT PF07851.13 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.29 10.3 14.2 0.32 10.2 12.3 1.8 1 1 1 2 2 2 0 TMPIT-like protein HMMR_N PF15905.5 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.32 10.4 18.3 0.14 11.6 7.9 2.1 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal HsbA PF12296.8 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.37 11.2 9.9 4.4 7.7 6.3 2.9 2 1 0 2 2 2 0 Hydrophobic surface binding protein A ApoO PF09769.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.39 10.7 4.8 2.2 8.2 1.3 2.8 1 1 1 2 2 2 0 Apolipoprotein O Atg14 PF10186.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.4 9.7 11.0 0.47 9.5 11.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CREPT PF16566.5 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.45 10.7 9.0 13 6.0 6.6 2.2 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Fzo_mitofusin PF04799.13 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.47 10.0 12.6 5 6.7 0.3 3.1 1 1 1 3 3 3 0 fzo-like conserved region V-ATPase_G PF03179.15 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.7 10.5 15.4 3.4 8.2 4.7 3.1 1 1 2 3 3 3 0 Vacuolar (H+)-ATPase G subunit DUF4407 PF14362.6 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.71 9.2 13.1 0.92 8.8 11.9 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Baculo_F PF12259.8 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 0.73 8.3 11.3 0.14 10.6 4.6 2.0 1 1 1 2 2 2 0 Baculovirus F protein MLD PF11647.8 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1 9.6 5.9 0.94 9.8 0.1 2.9 2 1 2 4 4 3 0 Membrane Localization Domain SseC PF04888.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.1 8.8 11.1 1.1 8.8 0.5 2.2 1 1 0 2 2 2 0 Secretion system effector C (SseC) like family DUF1512 PF07431.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.2 8.1 9.1 2.4 7.1 7.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1512) ACCA PF03255.14 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.3 8.9 13.0 1.8 8.5 4.7 2.7 1 1 2 3 3 3 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Phlebovirus_NSM PF07246.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.7 8.0 15.1 2.8 7.2 14.7 1.4 1 1 0 1 1 1 0 Phlebovirus nonstructural protein NS-M YtxH PF12732.7 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.7 9.2 9.5 3.5e+02 1.8 9.5 2.7 1 1 0 1 1 1 0 YtxH-like protein DUF1515 PF07439.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 1.9 8.6 7.2 1.4 8.9 3.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) DUF1451 PF07295.11 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 2.2 8.3 8.0 1.5 8.8 1.9 2.2 1 1 2 3 3 3 0 Zinc-ribbon containing domain DUF4208 PF13907.6 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 3.7 8.0 8.8 2.6e+02 2.1 8.2 2.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4208) YojJ PF10372.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 4.9 7.3 10.7 13 6.0 1.4 3.8 1 1 4 5 5 5 0 Bacterial membrane-spanning protein N-terminus AI-2E_transport PF01594.16 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 6.8 5.7 4.4 4.9 6.2 1.2 1.9 1 1 0 2 2 2 0 AI-2E family transporter DUF2203 PF09969.9 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 7.1 7.4 10.2 14 6.4 1.7 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Iron_permease PF04120.12 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 7.2 6.4 8.3 1.5 8.6 1.2 2.4 1 1 1 2 2 2 0 Low affinity iron permease ESM4 PF15952.5 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 7.7 6.9 13.1 26 5.2 12.9 1.9 1 1 0 1 1 1 0 Enhancer of split M4 family DUF5595 PF18077.1 NODE_41624_length_492_cov_1.910284_g34057_i0reverse_frame_3 - 9.3 6.4 10.7 6.3 7.0 0.5 3.7 2 1 3 5 5 5 0 Domain of unknown function (DUF5595) CLAMP PF14769.6 NODE_41623_length_492_cov_2.175055_g34056_i0forward_frame_3 - 0.19 12.2 5.4 0.12 12.8 1.2 2.1 2 0 0 2 2 2 0 Flagellar C1a complex subunit C1a-32 DBI_PRT PF02277.17 NODE_41612_length_492_cov_3.045952_g34045_i0forward_frame_3 - 1.4e-50 172.4 3.4 1.5e-50 172.3 3.4 1.0 1 0 0 1 1 1 1 Phosphoribosyltransferase UPF0179 PF03684.13 NODE_41610_length_492_cov_3.347921_g34043_i0reverse_frame_3 - 0.1 12.5 3.6 6.8 6.6 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0179) SNURF PF07192.11 NODE_41610_length_492_cov_3.347921_g34043_i0forward_frame_2 - 0.093 12.6 0.0 0.21 11.5 0.0 1.5 1 1 1 2 2 2 0 SNURF/RPN4 protein DUF295 PF03478.18 NODE_41608_length_492_cov_3.448578_g34041_i0reverse_frame_2 - 0.61 9.7 12.3 0.87 9.2 0.0 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF295) Kelch_1 PF01344.25 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 7.2e-27 92.7 1.2 7e-11 41.5 0.0 3.8 4 0 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 2e-23 81.8 0.2 6.9e-09 35.7 0.0 3.4 3 1 1 4 4 4 3 Kelch motif Kelch_4 PF13418.6 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 1.5e-22 79.3 0.7 1.8e-07 31.1 0.0 3.8 3 1 1 4 4 4 3 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 8.4e-18 64.2 0.0 2.4e-07 30.9 0.0 3.2 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 1.6e-11 43.7 0.2 2.4e-05 24.1 0.0 3.3 3 0 0 3 3 3 2 Kelch motif Kelch_5 PF13854.6 NODE_41608_length_492_cov_3.448578_g34041_i0forward_frame_3 - 3.6e-09 36.4 0.2 0.0073 16.3 0.0 3.3 3 0 0 3 3 3 3 Kelch motif 2TM PF13239.6 NODE_41604_length_492_cov_4.304158_g34037_i0forward_frame_3 - 0.01 16.1 1.0 0.02 15.2 1.0 1.5 1 0 0 1 1 1 0 2TM domain UPF0220 PF05255.11 NODE_41604_length_492_cov_4.304158_g34037_i0forward_frame_3 - 0.015 14.9 0.7 0.015 14.9 0.7 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0220) Urocanase PF01175.18 NODE_41603_length_492_cov_4.540481_g34036_i0reverse_frame_3 - 0.081 12.6 0.0 0.097 12.3 0.0 1.1 1 0 0 1 1 1 0 Urocanase Rossmann-like domain PRK PF00485.18 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.093 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.12 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.1 11.9 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.13 12.5 0.0 0.31 11.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain CoaE PF01121.20 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.14 11.8 0.1 0.29 10.8 0.1 1.5 1 0 0 1 1 1 0 Dephospho-CoA kinase AAA_18 PF13238.6 NODE_41603_length_492_cov_4.540481_g34036_i0forward_frame_2 - 0.16 12.5 0.0 0.36 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain TFB6 PF17110.5 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_3 - 0.081 12.7 4.1 0.11 12.2 4.1 1.2 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH Presenilin PF01080.17 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_3 - 2.6 6.7 12.3 2.7 6.7 12.3 1.1 1 0 0 1 1 1 0 Presenilin DUF4820 PF16091.5 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_3 - 5.5 6.3 13.3 7.6 5.8 13.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) NPR3 PF03666.13 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_3 - 5.8 5.6 16.5 6.9 5.3 16.5 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CTU2 PF10288.9 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.0024 18.1 10.5 0.0031 17.7 10.5 1.3 1 0 0 1 1 1 1 Cytoplasmic tRNA 2-thiolation protein 2 SLC12 PF03522.15 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.0048 16.0 7.8 0.004 16.2 7.8 1.1 1 0 0 1 1 1 1 Solute carrier family 12 TFIIA PF03153.13 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.03 14.3 36.7 0.038 14.0 36.7 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DDHD PF02862.17 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.04 14.1 11.3 0.044 13.9 11.3 1.1 1 0 0 1 1 1 0 DDHD domain Presenilin PF01080.17 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.05 12.4 16.7 0.052 12.3 16.7 1.1 1 0 0 1 1 1 0 Presenilin DUF4746 PF15928.5 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.056 12.9 9.0 0.055 12.9 9.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) RR_TM4-6 PF06459.12 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.06 13.2 13.4 0.06 13.2 13.4 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 SID-1_RNA_chan PF13965.6 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.083 11.3 3.3 0.08 11.3 3.3 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Serinc PF03348.15 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.093 11.6 4.6 0.09 11.7 4.6 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) DUF4407 PF14362.6 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.097 12.0 12.4 0.1 12.0 12.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FAM60A PF15396.6 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.12 12.4 7.6 0.11 12.5 7.6 1.2 1 0 0 1 1 1 0 Protein Family FAM60A SpoIIP PF07454.11 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.16 11.4 17.0 0.2 11.1 17.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) Neur_chan_memb PF02932.16 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.21 11.6 9.7 0.22 11.5 9.7 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region eIF-3_zeta PF05091.12 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.22 10.5 19.0 0.24 10.4 19.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) DUF913 PF06025.12 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.27 10.2 9.4 0.3 10.0 9.4 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) CSG2 PF16965.5 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.33 9.8 4.8 0.31 9.9 4.8 1.2 1 0 0 1 1 1 0 Ceramide synthase regulator Membralin PF09746.9 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.4 9.7 6.0 0.36 9.8 6.0 1.1 1 0 0 1 1 1 0 Tumour-associated protein Baculo_PP31 PF05311.11 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.42 10.1 12.2 0.44 10.0 12.2 1.1 1 0 0 1 1 1 0 Baculovirus 33KDa late protein (PP31) Hid1 PF12722.7 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.49 8.5 13.8 0.44 8.6 13.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein CLN3 PF02487.17 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 0.8 8.7 12.7 1.2 8.1 12.7 1.2 1 0 0 1 1 1 0 CLN3 protein Orf78 PF06024.12 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 2.4 8.5 10.9 12 6.3 10.9 1.9 1 1 0 1 1 1 0 Orf78 (ac78) MMM1 PF10296.9 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 2.8 6.9 11.3 4 6.4 11.3 1.2 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 PAT1 PF09770.9 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 3.5 5.8 32.8 3.8 5.7 32.8 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Dicty_REP PF05086.12 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 4.6 5.1 10.7 4.7 5.1 10.7 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Cellulose_synt PF03552.14 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 5.3 5.4 7.7 6.8 5.0 7.7 1.1 1 0 0 1 1 1 0 Cellulose synthase PepSY_TM PF03929.16 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 5.5 6.6 7.5 6.2 6.4 7.5 1.3 1 0 0 1 1 1 0 PepSY-associated TM region Med19 PF10278.9 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 7.6 6.4 14.6 10 6.0 14.6 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 LMBR1 PF04791.16 NODE_41601_length_492_cov_9.641138_g34034_i0reverse_frame_2 - 8 5.2 7.5 7.2 5.4 7.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein LPG_synthase_TM PF03706.13 NODE_41601_length_492_cov_9.641138_g34034_i0forward_frame_3 - 0.12 11.9 19.0 0.16 11.5 19.0 1.3 1 0 0 1 1 1 0 Lysylphosphatidylglycerol synthase TM region DUF2207 PF09972.9 NODE_41601_length_492_cov_9.641138_g34034_i0forward_frame_3 - 4.5 5.9 13.8 6 5.5 13.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phage_holin_3_6 PF07332.11 NODE_41601_length_492_cov_9.641138_g34034_i0forward_frame_3 - 6.2 6.9 24.0 9.8 6.3 24.0 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Myb_DNA-bind_3 PF12776.7 NODE_41594_length_492_cov_62.266958_g34027_i0forward_frame_2 - 0.011 16.7 0.1 0.022 15.8 0.1 1.5 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain CCDC32 PF14989.6 NODE_41592_length_492_cov_66.199125_g34025_i0forward_frame_2 - 0.092 12.7 3.1 0.16 12.0 2.5 1.6 1 1 1 2 2 2 0 Coiled-coil domain containing 32 RCDG1 PF15725.5 NODE_41576_length_492_cov_121.890591_g34009_i0reverse_frame_3 - 0.15 12.5 0.1 0.15 12.5 0.1 2.5 1 1 1 2 2 2 0 Renal cancer differentiation gene 1 protein Ank_4 PF13637.6 NODE_41572_length_492_cov_144.925602_g34005_i0forward_frame_2 - 2.5e-06 27.9 0.0 0.015 15.8 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_41572_length_492_cov_144.925602_g34005_i0forward_frame_2 - 0.0011 19.5 0.0 0.0018 18.9 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_41572_length_492_cov_144.925602_g34005_i0forward_frame_2 - 0.0068 16.8 0.3 0.95 10.2 0.0 2.6 3 0 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 NODE_41572_length_492_cov_144.925602_g34005_i0forward_frame_2 - 0.066 13.7 0.1 13 6.5 0.1 2.5 2 0 0 2 2 2 0 Ankyrin repeat Herpes_glycop PF01528.16 NODE_41569_length_492_cov_168.393873_g34002_i0reverse_frame_2 - 0.18 10.6 0.6 4 6.2 0.0 2.4 2 1 1 3 3 3 0 Herpesvirus glycoprotein M FGFR3_TM PF18123.1 NODE_41569_length_492_cov_168.393873_g34002_i0forward_frame_2 - 0.44 10.1 15.7 2.1 7.9 0.5 3.7 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain Stc1 PF12898.7 NODE_41569_length_492_cov_168.393873_g34002_i0forward_frame_2 - 0.76 10.4 6.6 1.6e+02 2.9 6.6 3.0 1 1 0 1 1 1 0 Stc1 domain ATP-synt_C PF00137.21 NODE_41561_length_492_cov_1016.332604_g33994_i0reverse_frame_3 - 3.6e-17 62.5 6.8 3.6e-17 62.5 6.8 1.8 3 0 0 3 3 3 1 ATP synthase subunit C Orthopox_C10L PF07020.11 NODE_41561_length_492_cov_1016.332604_g33994_i0forward_frame_2 - 0.84 10.4 4.9 1.1 10.0 4.2 1.5 1 1 0 1 1 1 0 Orthopoxvirus C10L protein Amino_oxidase PF01593.24 ORF99971 - 3.3e-05 23.4 0.4 4.7e-05 22.9 0.4 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Neil1-DNA_bind PF09292.10 ORF99971 - 0.12 12.3 0.0 0.33 10.9 0.0 1.7 2 0 0 2 2 2 0 Endonuclease VIII-like 1, DNA bind Trimer_CC PF08954.11 ORF99777 - 0.021 14.4 0.3 0.042 13.4 0.3 1.5 1 0 0 1 1 1 0 Trimerisation motif Cob_adeno_trans PF01923.18 ORF99047 - 1.3 9.2 4.0 0.66 10.1 1.4 1.7 1 1 1 2 2 2 0 Cobalamin adenosyltransferase EF-hand_1 PF00036.32 ORF9856 - 1.4e-11 43.0 2.3 0.00011 21.5 1.2 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF9856 - 1.1e-09 38.6 1.7 1.7e-09 38.0 1.7 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF9856 - 1.5e-08 33.9 2.0 0.00012 21.8 0.1 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF9856 - 3.2e-08 32.7 2.3 0.00037 19.8 0.1 2.4 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF9856 - 8e-05 22.9 2.0 0.00011 22.4 2.0 1.3 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Peptidase_S49 PF01343.18 ORF9856 - 0.039 13.9 0.9 0.054 13.4 0.9 1.2 1 0 0 1 1 1 0 Peptidase family S49 HTH_57 PF18679.1 ORF9856 - 0.045 14.1 0.9 0.073 13.4 0.9 1.4 1 0 0 1 1 1 0 ThcOx helix turn helix domain EF-hand_8 PF13833.6 ORF9856 - 0.058 13.2 2.3 0.16 11.9 2.1 1.9 1 1 0 1 1 1 0 EF-hand domain pair Dak2 PF02734.17 ORF9856 - 0.067 13.1 0.5 0.13 12.1 0.1 1.6 2 0 0 2 2 2 0 DAK2 domain EPL1 PF10513.9 ORF9856 - 1 9.7 4.3 1.3 9.3 3.4 1.6 1 1 1 2 2 2 0 Enhancer of polycomb-like WBP-1 PF11669.8 ORF9856 - 4.3 8.0 5.8 8.6 7.1 4.7 1.9 1 1 1 2 2 2 0 WW domain-binding protein 1 Uds1 PF15456.6 ORF91996 - 0.041 14.0 15.5 0.073 13.2 6.1 2.1 1 1 1 2 2 2 0 Up-regulated During Septation DUF3498 PF12004.8 ORF91996 - 0.074 12.2 18.8 0.015 14.5 10.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3498) ZnuA PF01297.17 ORF91996 - 0.085 12.3 3.4 0.11 11.9 3.4 1.2 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic SHE3 PF17078.5 ORF91996 - 0.088 12.5 23.2 0.41 10.3 23.1 1.8 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 Transcrip_act PF04949.13 ORF91996 - 0.19 11.6 13.0 0.23 11.4 4.7 2.1 1 1 1 2 2 2 0 Transcriptional activator Spc7 PF08317.11 ORF91996 - 0.28 10.0 22.4 0.66 8.8 22.4 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein GAS PF13851.6 ORF91996 - 0.7 9.2 27.0 0.64 9.3 4.8 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding HrpB7 PF09486.10 ORF91996 - 0.71 10.3 6.4 1.1 9.7 0.5 2.1 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) Perilipin PF03036.16 ORF91996 - 1 8.3 9.6 1.2 8.1 9.6 1.0 1 0 0 1 1 1 0 Perilipin family BST2 PF16716.5 ORF91996 - 1.1 9.9 16.9 3.2 8.4 6.6 2.9 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 Atg14 PF10186.9 ORF91996 - 1.8 7.5 18.8 2.4 7.2 18.8 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DDHD PF02862.17 ORF91996 - 3 7.9 9.7 3.8 7.6 9.7 1.1 1 0 0 1 1 1 0 DDHD domain BLOC1_2 PF10046.9 ORF91996 - 3.8 7.9 17.1 2 8.8 7.4 2.7 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GLE1 PF07817.13 ORF91996 - 4.3 6.5 15.0 0.18 11.0 6.3 2.1 1 1 1 2 2 2 0 GLE1-like protein CCDC-167 PF15188.6 ORF91996 - 4.9 7.6 15.8 21 5.6 0.5 2.7 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 Prefoldin PF02996.17 ORF91996 - 6.1 6.8 18.8 0.51 10.3 4.7 3.3 1 1 3 4 4 4 0 Prefoldin subunit Exonuc_VII_L PF02601.15 ORF91996 - 6.4 6.2 15.4 8.2 5.9 15.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit ALMT PF11744.8 ORF91996 - 7.1 5.3 15.3 8.9 5.0 15.3 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Jnk-SapK_ap_N PF09744.9 ORF91996 - 9.5 6.4 20.9 11 6.3 15.8 2.1 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 PS-DH PF14765.6 ORF9192 - 3.9e-10 39.4 1.5 4.4e-10 39.3 1.5 1.1 1 0 0 1 1 1 1 Polyketide synthase dehydratase DUF4696 PF15767.5 ORF9192 - 0.0062 15.2 0.2 0.0082 14.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4696) FCD PF07729.12 ORF9192 - 0.06 13.8 1.1 0.42 11.1 0.2 2.3 2 0 0 2 2 2 0 FCD domain DUF4731 PF15875.5 ORF90864 - 0.16 12.2 0.3 0.31 11.3 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) Rotamase PF00639.21 ORF89100 - 5.8e-19 68.8 0.2 5.8e-19 68.8 0.2 2.1 2 0 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF89100 - 9.9e-19 68.0 0.2 9.9e-19 68.0 0.2 1.8 1 1 1 2 2 2 1 PPIC-type PPIASE domain Bac_luciferase PF00296.20 ORF89100 - 0.063 12.7 0.2 0.07 12.5 0.2 1.2 1 0 0 1 1 1 0 Luciferase-like monooxygenase DUF2183 PF09949.9 ORF89100 - 0.16 12.3 0.5 0.29 11.5 0.5 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2183) TPR_4 PF07721.14 ORF88667 - 0.51 11.1 4.8 0.52 11.1 2.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat p25-alpha PF05517.12 ORF87611 - 0.0015 18.7 0.4 0.0021 18.2 0.4 1.3 1 0 0 1 1 1 1 p25-alpha Pkinase PF00069.25 ORF85568 - 1.9e-09 37.3 0.0 2.5e-09 36.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85568 - 3.4e-05 23.2 0.0 4.5e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Got1 PF04178.12 ORF85149 - 4.1e-15 56.2 22.0 4.3e-15 56.1 20.3 1.8 1 1 1 2 2 2 1 Got1/Sft2-like family DUF2070 PF09843.9 ORF85149 - 7 4.8 10.9 8.3 4.6 10.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4087 PF13316.6 ORF84049 - 0.11 13.0 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4087) Skp1 PF01466.19 ORF82710 - 1.2e-27 95.7 1.2 5.5e-27 93.6 0.9 2.1 2 0 0 2 2 2 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF82710 - 8.4e-24 83.5 0.3 1.9e-23 82.4 0.3 1.6 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain IF4E PF01652.18 ORF8236 - 7.3e-31 107.1 0.0 9.1e-31 106.8 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E WH1 PF00568.23 ORF78035 - 4e-05 23.5 0.0 6.1e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 WH1 domain DUF3995 PF13160.6 ORF7743 - 0.06 13.7 0.5 0.57 10.5 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3995) TMEM100 PF16311.5 ORF7743 - 0.08 12.5 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 100 Voldacs PF03517.13 ORF77235 - 0.054 13.6 0.1 0.067 13.3 0.1 1.1 1 0 0 1 1 1 0 Regulator of volume decrease after cellular swelling C8 PF08742.11 ORF74624 - 0.029 14.8 1.7 0.18 12.3 0.5 2.1 2 0 0 2 2 2 0 C8 domain ING PF12998.7 ORF7459 - 0.029 14.9 3.1 0.073 13.7 3.1 1.9 1 1 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding PH_11 PF15413.6 ORF72261 - 0.036 14.5 1.5 0.089 13.2 1.5 1.7 1 1 0 1 1 1 0 Pleckstrin homology domain PH PF00169.29 ORF72261 - 0.066 13.7 1.3 0.12 12.9 1.3 1.4 1 0 0 1 1 1 0 PH domain AstB PF04996.12 ORF69773 - 1e-68 232.1 0.0 1.1e-68 231.9 0.0 1.0 1 0 0 1 1 1 1 Succinylarginine dihydrolase betaPIX_CC PF16523.5 ORF68555 - 0.035 13.9 1.7 0.073 12.9 1.7 1.5 1 0 0 1 1 1 0 betaPIX coiled coil TAN PF11640.8 ORF68555 - 0.071 13.2 0.8 0.094 12.8 0.8 1.2 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair Toxin_3 PF00537.18 ORF65508 - 0.01 16.0 1.4 0.01 16.0 1.4 1.7 2 0 0 2 2 2 1 Scorpion toxin-like domain ABM PF03992.16 ORF62519 - 0.00073 19.6 0.1 0.001 19.2 0.1 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Protein_K PF12283.8 ORF62519 - 0.086 13.1 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 Bacteriophage protein K zf-B_box PF00643.24 ORF61372 - 0.00082 19.5 7.8 0.00082 19.5 7.8 2.4 3 0 0 3 3 3 1 B-box zinc finger PHD PF00628.29 ORF61372 - 0.0018 18.1 3.7 0.0018 18.1 3.7 1.9 2 0 0 2 2 2 1 PHD-finger PHD_2 PF13831.6 ORF61372 - 0.0035 16.9 0.9 0.0097 15.4 0.9 1.8 1 0 0 1 1 1 1 PHD-finger Alpha-2-MRAP_C PF06401.11 ORF61372 - 0.029 14.3 0.6 0.039 13.9 0.6 1.1 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain SNO PF01174.19 ORF61372 - 0.083 12.7 0.6 1 9.2 0.0 2.2 1 1 0 2 2 2 0 SNO glutamine amidotransferase family Prok-RING_1 PF14446.6 ORF61372 - 0.2 11.6 4.9 0.39 10.7 4.9 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Abhydrolase_4 PF08386.10 ORF60301 - 2.6e-11 43.5 0.1 8.1e-09 35.5 0.0 2.1 1 1 1 2 2 2 2 TAP-like protein DUF4830 PF16112.5 ORF60046 - 0.036 14.5 0.1 0.064 13.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) BPD_transp_1 PF00528.22 ORF59557 - 0.067 12.9 0.6 0.067 12.9 0.6 1.6 2 0 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component PHD PF00628.29 ORF59099 - 0.00036 20.4 12.6 0.00071 19.4 12.6 1.5 1 0 0 1 1 1 1 PHD-finger zf-4CXXC_R1 PF10497.9 ORF59099 - 0.067 13.4 9.4 0.1 12.8 9.4 1.5 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 zf-PARP PF00645.18 ORF59099 - 1.2 10.0 12.7 1.1 10.2 4.9 2.6 1 1 1 2 2 2 0 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region Imp-YgjV PF10688.9 ORF59083 - 0.041 13.7 0.2 0.075 12.8 0.2 1.5 1 0 0 1 1 1 0 Bacterial inner membrane protein Oxidored_q6 PF01058.22 ORF58257 - 0.037 13.9 0.0 0.054 13.3 0.0 1.3 1 0 0 1 1 1 0 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1400 PF07176.11 ORF58257 - 0.084 13.2 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1400) DUF2795 PF11387.8 ORF56629 - 0.017 15.3 0.0 0.031 14.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2795) IL6Ra-bind PF09240.10 ORF54388 - 0.093 13.2 0.4 0.13 12.7 0.4 1.3 1 0 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding Pkinase_C PF00433.24 ORF54216 - 7.2e-08 33.0 2.3 1.3e-07 32.2 2.3 1.4 1 0 0 1 1 1 1 Protein kinase C terminal domain Pkinase PF00069.25 ORF54216 - 0.043 13.2 0.0 0.06 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain AvrB_AvrC PF05394.11 ORF52566 - 0.013 14.7 0.5 0.017 14.3 0.5 1.0 1 0 0 1 1 1 0 Avirulence protein RRM_1 PF00076.22 ORF51228 - 6.1e-12 45.2 1.3 3.7e-09 36.3 0.4 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF51228 - 4.6e-09 35.9 1.6 7.4e-07 28.8 0.2 2.1 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF51228 - 6.8e-08 32.3 0.4 0.00081 19.2 0.1 2.1 2 0 0 2 2 2 2 Occluded RNA-recognition motif AJAP1_PANP_C PF15298.6 ORF5057 - 0.2 11.9 5.0 8.1 6.6 0.0 2.7 3 0 0 3 3 3 0 AJAP1/PANP C-terminus CENP-F_leu_zip PF10473.9 ORF48269 - 0.00022 21.3 18.4 0.075 13.1 11.7 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 ORF48269 - 0.00092 18.6 18.8 0.012 14.9 18.7 2.0 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding DivIC PF04977.15 ORF48269 - 0.0012 18.6 14.2 0.16 11.7 0.7 3.1 2 1 1 3 3 3 3 Septum formation initiator ZapB PF06005.12 ORF48269 - 0.002 18.5 16.8 0.066 13.7 2.7 2.3 2 0 0 2 2 2 2 Cell division protein ZapB Sas6_CC PF18594.1 ORF48269 - 0.0032 17.2 3.3 5.8 6.8 0.1 3.7 2 1 1 3 3 3 0 Sas6/XLF/XRCC4 coiled-coil domain DUF2968 PF11180.8 ORF48269 - 0.0035 17.0 15.5 0.052 13.2 9.3 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2968) DUF1664 PF07889.12 ORF48269 - 0.0043 17.1 9.9 0.24 11.4 4.8 2.1 1 1 0 2 2 2 2 Protein of unknown function (DUF1664) CCDC144C PF14915.6 ORF48269 - 0.0079 15.4 14.5 0.011 14.9 14.5 1.1 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region Spc7 PF08317.11 ORF48269 - 0.0096 14.8 15.5 0.016 14.1 15.5 1.3 1 0 0 1 1 1 1 Spc7 kinetochore protein SlyX PF04102.12 ORF48269 - 0.012 16.2 14.3 0.42 11.3 6.2 2.4 1 1 1 2 2 2 0 SlyX DUF4140 PF13600.6 ORF48269 - 0.013 15.9 7.1 2.9 8.4 0.0 2.5 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) JAKMIP_CC3 PF16034.5 ORF48269 - 0.014 15.3 16.1 0.031 14.2 16.2 1.5 1 1 0 1 1 1 0 JAKMIP CC3 domain VRP1 PF03538.14 ORF48269 - 0.017 14.6 1.1 0.022 14.2 1.1 1.3 1 1 0 1 1 1 0 Salmonella virulence plasmid 28.1kDa A protein AAA_13 PF13166.6 ORF48269 - 0.017 13.8 9.9 0.021 13.5 9.9 1.1 1 0 0 1 1 1 0 AAA domain DUF4618 PF15397.6 ORF48269 - 0.021 14.2 16.3 0.16 11.3 2.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) Erf4 PF10256.9 ORF48269 - 0.022 14.8 0.7 0.044 13.9 0.2 1.7 1 1 0 2 2 1 0 Golgin subfamily A member 7/ERF4 family FAM76 PF16046.5 ORF48269 - 0.03 13.7 14.6 0.035 13.5 10.6 2.0 1 1 1 2 2 2 0 FAM76 protein Rab5-bind PF09311.11 ORF48269 - 0.035 13.5 16.2 0.84 9.0 10.1 2.1 1 1 1 2 2 2 0 Rabaptin-like protein DUF4795 PF16043.5 ORF48269 - 0.045 13.4 15.1 0.26 10.9 4.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Tektin PF03148.14 ORF48269 - 0.051 12.3 15.6 0.25 10.0 2.2 1.9 1 1 1 2 2 2 0 Tektin family FapA PF03961.13 ORF48269 - 0.054 12.1 11.3 0.13 10.8 11.3 1.6 1 1 0 1 1 1 0 Flagellar Assembly Protein A Csm1_N PF18504.1 ORF48269 - 0.061 13.7 2.3 0.061 13.7 2.3 3.0 1 1 3 4 4 4 0 Csm1 N-terminal domain DUF4164 PF13747.6 ORF48269 - 0.063 13.6 10.7 0.61 10.4 5.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) DUF5320 PF17253.2 ORF48269 - 0.069 14.2 12.9 2.5 9.2 2.8 3.1 1 1 1 2 2 2 0 Family of unknown function (DUF5320) bZIP_1 PF00170.21 ORF48269 - 0.073 13.2 16.1 0.65 10.1 2.8 2.6 2 1 0 2 2 2 0 bZIP transcription factor TPR_MLP1_2 PF07926.12 ORF48269 - 0.075 13.1 18.1 1.1 9.4 8.7 2.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 ORF48269 - 0.11 11.8 11.2 0.31 10.4 11.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF48269 - 0.12 12.5 20.0 1.3 9.1 3.2 2.5 1 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding HlyD_2 PF12700.7 ORF48269 - 0.15 10.8 9.0 0.18 10.5 9.0 1.1 1 0 0 1 1 1 0 HlyD family secretion protein SAM_KSR1 PF13543.6 ORF48269 - 0.15 12.2 7.2 0.061 13.5 3.7 2.0 1 1 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 APG6_N PF17675.1 ORF48269 - 0.15 12.6 19.6 1.4 9.5 14.0 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF2408 PF10303.9 ORF48269 - 0.16 12.5 7.7 0.21 12.1 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Cep57_MT_bd PF06657.13 ORF48269 - 0.17 12.4 15.1 0.35 11.4 4.2 2.3 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Helo_like_N PF17111.5 ORF48269 - 0.17 11.2 10.6 1.2 8.4 1.1 2.2 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins Atg14 PF10186.9 ORF48269 - 0.2 10.7 13.1 1.1 8.2 13.1 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5082 PF16888.5 ORF48269 - 0.23 11.7 13.0 1.1 9.6 3.0 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) HALZ PF02183.18 ORF48269 - 0.26 11.5 0.3 0.26 11.5 0.3 3.8 3 1 1 4 4 4 0 Homeobox associated leucine zipper ZapD PF07072.11 ORF48269 - 0.3 10.8 8.4 0.42 10.3 7.8 1.5 1 1 1 2 2 2 0 Cell division protein LCD1 PF09798.9 ORF48269 - 0.34 9.4 11.3 0.44 9.0 11.3 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein PRKG1_interact PF15898.5 ORF48269 - 0.54 11.2 15.5 18 6.3 14.9 2.3 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain UPF0242 PF06785.11 ORF48269 - 0.58 10.2 17.5 1.9 8.6 17.5 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus UCH PF00443.29 ORF48269 - 0.59 9.6 4.0 0.72 9.3 4.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Ax_dynein_light PF10211.9 ORF48269 - 0.59 10.0 15.6 2 8.3 6.6 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain HIP1_clath_bdg PF16515.5 ORF48269 - 0.69 10.6 19.6 1.1 9.9 7.8 2.6 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Fez1 PF06818.15 ORF48269 - 0.69 10.3 15.1 1.3 9.4 15.1 1.4 1 1 0 1 1 1 0 Fez1 NPV_P10 PF05531.12 ORF48269 - 0.9 10.1 9.5 1.2 9.6 2.0 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Tup_N PF08581.10 ORF48269 - 0.91 9.9 14.5 0.45 10.8 10.2 2.1 1 1 1 2 2 2 0 Tup N-terminal Syntaxin_2 PF14523.6 ORF48269 - 0.95 9.9 15.1 20 5.7 15.1 2.2 1 1 0 1 1 1 0 Syntaxin-like protein bZIP_2 PF07716.15 ORF48269 - 1 9.5 19.3 0.18 11.9 1.3 3.6 2 2 1 3 3 3 0 Basic region leucine zipper Cluap1 PF10234.9 ORF48269 - 1.1 8.5 14.4 3.4 7.0 3.6 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 Tropomyosin_1 PF12718.7 ORF48269 - 1.2 9.3 17.4 2.8 8.1 4.4 2.1 1 1 1 2 2 2 0 Tropomyosin like Ly49 PF08391.10 ORF48269 - 1.5 9.2 8.1 1.7 9.0 7.2 1.6 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region DUF724 PF05266.14 ORF48269 - 1.5 8.6 13.4 1.9 8.3 3.3 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF724) DUF3450 PF11932.8 ORF48269 - 1.6 8.0 16.2 4 6.7 6.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) LapA_dom PF06305.11 ORF48269 - 2 8.3 8.0 38 4.2 0.5 3.4 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain Spc24 PF08286.11 ORF48269 - 2.2 8.6 14.7 4.2 7.7 3.4 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 zf-C4H2 PF10146.9 ORF48269 - 2.4 8.4 12.5 4.6 7.5 12.5 1.4 1 1 0 1 1 1 0 Zinc finger-containing protein TMPIT PF07851.13 ORF48269 - 2.7 7.2 13.3 3.2 6.9 9.9 1.9 1 1 1 2 2 2 0 TMPIT-like protein Fib_alpha PF08702.10 ORF48269 - 2.9 8.1 12.1 4.1 7.6 12.1 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family GIT_CC PF16559.5 ORF48269 - 3.2 7.7 14.9 2.3 8.2 1.5 2.8 1 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF1192 PF06698.11 ORF48269 - 3.4 7.8 6.5 7.5 6.7 0.1 3.4 2 1 2 4 4 3 0 Protein of unknown function (DUF1192) Surfac_D-trimer PF09006.11 ORF48269 - 3.5 7.6 8.1 40 4.2 0.4 3.3 2 1 1 3 3 3 0 Lung surfactant protein D coiled-coil trimerisation Jnk-SapK_ap_N PF09744.9 ORF48269 - 4 7.7 19.2 13 6.0 13.5 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 KfrA_N PF11740.8 ORF48269 - 4.1 8.1 10.6 14 6.4 10.0 2.0 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term Tho2 PF11262.8 ORF48269 - 4.4 6.4 13.7 7 5.7 2.7 2.0 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 JIP_LZII PF16471.5 ORF48269 - 5 7.4 17.1 0.68 10.1 1.6 3.1 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II Prefoldin_2 PF01920.20 ORF48269 - 6.6 6.8 19.0 13 5.8 5.4 3.0 1 1 2 3 3 3 0 Prefoldin subunit Nnf1 PF03980.14 ORF48269 - 6.8 7.1 15.9 44 4.5 1.0 2.8 1 1 2 3 3 3 0 Nnf1 Prominin PF05478.11 ORF48269 - 7 4.5 11.5 14 3.5 11.5 1.5 1 1 0 1 1 1 0 Prominin bZIP_Maf PF03131.17 ORF48269 - 7.2 7.2 13.1 27 5.4 7.9 2.3 1 1 1 2 2 2 0 bZIP Maf transcription factor YabA PF06156.13 ORF48269 - 8.6 7.1 15.0 18 6.0 6.0 2.3 1 1 1 2 2 2 0 Initiation control protein YabA ABC_tran_CTD PF16326.5 ORF48269 - 9.4 6.6 16.3 10 6.4 4.1 3.2 1 1 2 3 3 3 0 ABC transporter C-terminal domain HJURP_mid PF12346.8 ORF47778 - 0.011 16.2 0.6 0.021 15.3 0.6 1.4 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat Mlh1_C PF16413.5 ORF47744 - 0.17 11.2 0.8 0.68 9.2 0.1 1.9 2 0 0 2 2 2 0 DNA mismatch repair protein Mlh1 C-terminus BET PF17035.5 ORF47225 - 0.00042 20.4 0.2 0.001 19.2 0.0 1.8 2 0 0 2 2 2 1 Bromodomain extra-terminal - transcription regulation DUF2795 PF11387.8 ORF45783 - 0.017 15.3 0.0 0.031 14.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2795) DUF3278 PF11683.8 ORF43909 - 3.4 7.8 12.4 0.59 10.2 1.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3278) Lectin_N PF03954.14 ORF43909 - 9.8 5.9 6.9 32 4.3 2.2 2.3 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain DUF4516 PF14990.6 ORF41947 - 0.034 13.9 0.3 0.079 12.7 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) DnaJ PF00226.31 ORF40073 - 0.022 14.9 0.0 0.039 14.1 0.0 1.4 1 0 0 1 1 1 0 DnaJ domain SNARE PF05739.19 ORF3931 - 0.4 10.7 2.8 0.75 9.8 2.5 1.7 1 1 0 1 1 1 0 SNARE domain Rieske PF00355.26 ORF36220 - 3.8e-10 39.6 0.0 5e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF36220 - 0.05 13.5 0.0 0.077 12.9 0.0 1.3 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain Mannosyl_trans3 PF11051.8 ORF36220 - 0.051 12.9 0.1 0.068 12.5 0.1 1.2 1 0 0 1 1 1 0 Mannosyltransferase putative AUX_IAA PF02309.16 ORF36220 - 0.084 12.7 0.2 0.13 12.1 0.2 1.2 1 0 0 1 1 1 0 AUX/IAA family DSPc PF00782.20 ORF35581 - 2.5e-07 30.6 0.0 2.9e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF35581 - 0.0012 18.4 0.0 0.0026 17.3 0.0 1.3 1 1 0 1 1 1 1 Protein-tyrosine phosphatase CBAH PF02275.18 ORF33731 - 0.003 17.3 0.0 0.0035 17.1 0.0 1.1 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family Abhydrolase_1 PF00561.20 ORF29670 - 0.0015 18.2 0.0 0.0015 18.2 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF4884 PF16225.5 ORF29670 - 0.033 14.3 0.2 0.06 13.4 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4884) BAAT_C PF08840.11 ORF29670 - 0.038 13.9 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF2892 PF11127.8 ORF29142 - 0.7 10.0 6.3 1.2 9.2 6.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) COPIIcoated_ERV PF07970.12 ORF26654 - 9.8e-24 84.4 1.6 1.1e-23 84.2 1.6 1.0 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter CENP-F_leu_zip PF10473.9 ORF26123 - 0.0002 21.4 18.7 0.036 14.1 11.6 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 ORF26123 - 0.00094 18.6 19.1 0.011 15.1 19.0 2.0 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding DUF1664 PF07889.12 ORF26123 - 0.0017 18.4 9.7 0.093 12.8 4.7 2.1 1 1 0 2 2 2 1 Protein of unknown function (DUF1664) DivIC PF04977.15 ORF26123 - 0.0017 18.1 13.8 0.16 11.7 0.7 3.1 2 1 1 3 3 3 2 Septum formation initiator ZapB PF06005.12 ORF26123 - 0.0028 18.0 17.5 0.066 13.7 2.7 2.3 2 0 0 2 2 2 2 Cell division protein ZapB CCDC144C PF14915.6 ORF26123 - 0.0033 16.6 14.9 0.004 16.3 14.9 1.1 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region DUF2968 PF11180.8 ORF26123 - 0.0036 16.9 15.8 0.054 13.1 9.6 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2968) DUF4140 PF13600.6 ORF26123 - 0.0086 16.5 7.0 2.3 8.7 4.0 2.5 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) AAA_13 PF13166.6 ORF26123 - 0.0092 14.7 9.9 0.011 14.4 9.9 1.0 1 0 0 1 1 1 1 AAA domain JAKMIP_CC3 PF16034.5 ORF26123 - 0.013 15.5 16.1 0.038 13.9 16.5 1.6 1 1 0 1 1 1 0 JAKMIP CC3 domain VRP1 PF03538.14 ORF26123 - 0.014 14.8 0.8 0.018 14.4 0.8 1.3 1 1 0 1 1 1 0 Salmonella virulence plasmid 28.1kDa A protein Sas6_CC PF18594.1 ORF26123 - 0.015 15.1 5.8 5.8 6.8 0.1 3.9 3 1 1 4 4 3 0 Sas6/XLF/XRCC4 coiled-coil domain Rab5-bind PF09311.11 ORF26123 - 0.019 14.4 16.6 0.46 9.8 10.5 2.1 1 1 1 2 2 2 0 Rabaptin-like protein Erf4 PF10256.9 ORF26123 - 0.023 14.8 0.7 0.046 13.8 0.2 1.7 1 1 1 2 2 2 0 Golgin subfamily A member 7/ERF4 family DUF4618 PF15397.6 ORF26123 - 0.024 14.0 16.4 0.12 11.7 2.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) FAM76 PF16046.5 ORF26123 - 0.026 13.9 14.6 0.032 13.6 10.7 2.0 1 1 1 2 2 2 0 FAM76 protein SlyX PF04102.12 ORF26123 - 0.029 15.0 15.2 0.82 10.3 6.8 2.5 1 1 1 2 2 2 0 SlyX Tektin PF03148.14 ORF26123 - 0.031 13.0 15.4 0.24 10.1 1.9 2.0 1 1 1 2 2 2 0 Tektin family Spc7 PF08317.11 ORF26123 - 0.035 13.0 17.6 0.077 11.9 17.6 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein FapA PF03961.13 ORF26123 - 0.043 12.4 11.0 0.11 11.0 11.0 1.6 1 1 0 1 1 1 0 Flagellar Assembly Protein A DUF5102 PF17104.5 ORF26123 - 0.045 13.8 1.4 0.045 13.8 1.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5102) DUF4795 PF16043.5 ORF26123 - 0.046 13.3 15.0 0.23 11.1 3.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF4164 PF13747.6 ORF26123 - 0.06 13.6 10.8 0.54 10.6 5.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) TPR_MLP1_2 PF07926.12 ORF26123 - 0.061 13.4 17.9 1.5 8.9 17.7 2.2 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Csm1_N PF18504.1 ORF26123 - 0.066 13.6 2.7 0.066 13.6 2.7 3.0 1 1 3 4 4 4 0 Csm1 N-terminal domain DUF5320 PF17253.2 ORF26123 - 0.069 14.2 13.4 1.4 10.0 0.7 3.1 1 1 2 3 3 3 0 Family of unknown function (DUF5320) bZIP_1 PF00170.21 ORF26123 - 0.085 13.0 16.2 0.82 9.8 3.1 2.5 2 1 0 2 2 2 0 bZIP transcription factor ADIP PF11559.8 ORF26123 - 0.11 12.6 20.0 1.1 9.4 2.9 2.6 1 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF2408 PF10303.9 ORF26123 - 0.12 13.0 7.3 0.16 12.6 7.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) APG6_N PF17675.1 ORF26123 - 0.13 12.8 19.6 1.3 9.6 14.2 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region HlyD_2 PF12700.7 ORF26123 - 0.13 11.0 8.2 0.17 10.6 8.2 1.1 1 0 0 1 1 1 0 HlyD family secretion protein DUF4407 PF14362.6 ORF26123 - 0.14 11.5 11.2 0.59 9.4 11.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TMF_TATA_bd PF12325.8 ORF26123 - 0.19 11.9 15.8 2.6 8.3 6.7 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Helo_like_N PF17111.5 ORF26123 - 0.2 11.0 10.9 1.3 8.3 1.0 2.3 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins SAM_KSR1 PF13543.6 ORF26123 - 0.2 11.8 7.8 0.068 13.3 3.8 2.1 1 1 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 NPV_P10 PF05531.12 ORF26123 - 0.22 12.0 9.3 1.2 9.6 2.0 2.5 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Atg14 PF10186.9 ORF26123 - 0.25 10.4 13.4 0.21 10.6 9.2 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 HALZ PF02183.18 ORF26123 - 0.26 11.5 0.3 0.26 11.5 0.3 3.9 3 1 1 4 4 4 0 Homeobox associated leucine zipper DUF5082 PF16888.5 ORF26123 - 0.29 11.4 12.9 1.2 9.4 2.9 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) DUF724 PF05266.14 ORF26123 - 0.31 10.8 12.8 0.47 10.2 3.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) LCD1 PF09798.9 ORF26123 - 0.32 9.5 11.1 0.39 9.2 11.1 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein PRKG1_interact PF15898.5 ORF26123 - 0.34 11.8 15.4 0.55 11.2 3.4 2.5 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain BRE1 PF08647.11 ORF26123 - 0.38 10.9 17.4 0.67 10.1 4.7 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase ZapD PF07072.11 ORF26123 - 0.38 10.5 8.9 0.57 9.9 8.4 1.5 1 1 1 2 2 2 0 Cell division protein Cep57_MT_bd PF06657.13 ORF26123 - 0.49 10.9 14.8 0.29 11.6 4.0 2.5 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 UCH PF00443.29 ORF26123 - 0.55 9.7 3.9 0.66 9.4 3.9 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Tropomyosin_1 PF12718.7 ORF26123 - 0.56 10.4 17.1 1.8 8.7 4.4 2.1 1 1 1 2 2 2 0 Tropomyosin like Fez1 PF06818.15 ORF26123 - 0.56 10.6 15.2 1.2 9.5 15.2 1.5 1 1 0 1 1 1 0 Fez1 Pox_A_type_inc PF04508.12 ORF26123 - 0.63 10.0 0.1 0.63 10.0 0.1 2.5 3 0 0 3 3 1 0 Viral A-type inclusion protein repeat zf-C4H2 PF10146.9 ORF26123 - 0.66 10.2 10.3 0.99 9.7 10.3 1.2 1 0 0 1 1 1 0 Zinc finger-containing protein UPF0242 PF06785.11 ORF26123 - 0.66 10.0 17.6 2.8 8.0 17.7 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HIP1_clath_bdg PF16515.5 ORF26123 - 0.69 10.6 20.2 1 10.0 8.3 2.6 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Ax_dynein_light PF10211.9 ORF26123 - 0.74 9.7 15.6 1.4 8.8 5.8 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain Tup_N PF08581.10 ORF26123 - 0.89 9.9 14.5 0.47 10.8 10.2 2.2 1 1 1 2 2 2 0 Tup N-terminal DUF3450 PF11932.8 ORF26123 - 1.1 8.6 16.1 3.4 6.9 6.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) bZIP_2 PF07716.15 ORF26123 - 1.1 9.3 19.5 0.18 11.9 1.3 3.6 2 2 1 3 3 3 0 Basic region leucine zipper Cluap1 PF10234.9 ORF26123 - 1.2 8.4 15.0 3.7 6.9 3.7 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 Syntaxin_2 PF14523.6 ORF26123 - 1.4 9.4 14.9 22 5.5 14.9 2.1 1 1 0 1 1 1 0 Syntaxin-like protein Ly49 PF08391.10 ORF26123 - 1.4 9.3 8.0 2.1 8.7 7.6 1.6 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region JIP_LZII PF16471.5 ORF26123 - 1.7 8.9 16.6 0.24 11.6 1.3 3.1 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II TPD52 PF04201.15 ORF26123 - 2.2 7.8 16.2 0.4 10.3 1.7 3.0 1 1 2 3 3 3 0 Tumour protein D52 family DUF1192 PF06698.11 ORF26123 - 2.3 8.3 5.2 7.5 6.7 0.1 3.3 2 1 2 4 4 3 0 Protein of unknown function (DUF1192) GIT_CC PF16559.5 ORF26123 - 2.5 8.0 14.6 2.6 8.0 2.3 2.9 1 1 2 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor LapA_dom PF06305.11 ORF26123 - 2.5 8.0 8.4 40 4.1 0.6 3.4 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain TMPIT PF07851.13 ORF26123 - 2.6 7.2 13.5 0.91 8.7 5.4 1.9 1 1 1 2 2 2 0 TMPIT-like protein Jnk-SapK_ap_N PF09744.9 ORF26123 - 3 8.0 19.1 14 5.9 15.9 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Tho2 PF11262.8 ORF26123 - 3.5 6.8 13.5 4.7 6.3 2.2 2.0 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 Spc24 PF08286.11 ORF26123 - 3.6 7.9 15.1 6 7.2 3.6 2.6 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Exonuc_VII_L PF02601.15 ORF26123 - 3.6 7.1 10.0 5.6 6.4 10.0 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Surfac_D-trimer PF09006.11 ORF26123 - 3.7 7.5 8.2 40 4.2 0.4 3.4 2 1 1 3 3 3 0 Lung surfactant protein D coiled-coil trimerisation KfrA_N PF11740.8 ORF26123 - 3.7 8.3 10.8 13 6.5 10.3 2.0 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term ABC_tran_CTD PF16326.5 ORF26123 - 4.2 7.7 15.9 18 5.7 2.3 3.1 1 1 2 3 3 3 0 ABC transporter C-terminal domain Prefoldin_2 PF01920.20 ORF26123 - 4.7 7.2 19.0 3.1 7.8 3.3 3.0 1 1 2 3 3 3 0 Prefoldin subunit Fib_alpha PF08702.10 ORF26123 - 5.8 7.1 13.1 8.2 6.6 13.1 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family bZIP_Maf PF03131.17 ORF26123 - 6.5 7.3 13.1 25 5.5 7.7 2.4 1 1 1 2 2 2 0 bZIP Maf transcription factor EMP24_GP25L PF01105.24 ORF26123 - 6.9 6.6 11.4 1.3 8.9 1.3 2.3 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD Nnf1 PF03980.14 ORF26123 - 7.8 6.9 15.9 41 4.6 13.3 2.7 1 1 2 3 3 3 0 Nnf1 Swi5 PF07061.11 ORF26123 - 7.9 6.6 11.6 3.2e+03 -1.7 11.6 2.9 1 1 0 1 1 0 0 Swi5 Prominin PF05478.11 ORF26123 - 8.7 4.1 11.4 18 3.1 11.4 1.5 1 1 0 1 1 1 0 Prominin TMF_DNA_bd PF12329.8 ORF26123 - 9.3 6.3 15.9 5.8 7.0 1.9 2.6 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding YabA PF06156.13 ORF26123 - 9.3 7.0 15.2 37 5.0 4.6 2.3 1 1 1 2 2 2 0 Initiation control protein YabA # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks153.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks153.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks153.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks153.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aminotran_1_2 PF00155.21 ORF23722 - 1.2e-34 120.1 0.1 1.3e-34 119.9 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DUF956 PF06115.11 ORF23722 - 0.064 13.0 0.1 0.16 11.7 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF956) ASC PF00858.24 ORF21268 - 3.1 6.7 11.5 3.2 6.6 11.5 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel PQQ_3 PF13570.6 ORF19817 - 9.2 6.9 6.4 33 5.1 0.3 3.0 3 0 0 3 3 3 0 PQQ-like domain FAM53 PF15242.6 ORF19817 - 9.5 5.9 16.3 1.3 8.7 1.7 2.1 2 0 0 2 2 2 0 Family of FAM53 V_ATPase_I PF01496.19 ORF18903 - 0.0034 15.4 0.4 0.0038 15.2 0.4 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family EMP70 PF02990.16 ORF18903 - 0.31 9.6 7.1 4.6 5.8 4.1 2.1 2 0 0 2 2 2 0 Endomembrane protein 70 DUF3671 PF12420.8 ORF18903 - 0.67 10.1 7.7 0.089 12.9 3.0 1.8 2 0 0 2 2 2 0 Protein of unknown function TMEM154 PF15102.6 ORF18903 - 1.3 8.9 4.2 10 6.0 1.5 2.3 1 1 1 2 2 2 0 TMEM154 protein family Syndecan PF01034.20 ORF18903 - 7.2 6.6 6.6 29 4.7 1.9 2.7 3 0 0 3 3 3 0 Syndecan domain MgtE PF01769.16 ORF18075 - 0.059 13.8 0.7 0.1 13.0 0.3 1.5 2 0 0 2 2 2 0 Divalent cation transporter DUF2208 PF09973.9 ORF16179 - 8.1 6.0 8.3 1.9 8.0 5.1 1.6 2 0 0 2 2 2 0 Predicted membrane protein (DUF2208) Prok-E2_E PF14462.6 ORF15343 - 0.047 13.5 0.1 0.072 12.9 0.1 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family E TMEM154 PF15102.6 ORF151629 - 6.4e-05 22.9 0.9 0.00012 22.0 0.9 1.4 1 1 0 1 1 1 1 TMEM154 protein family LRR19-TM PF15176.6 ORF151629 - 0.0032 17.4 1.8 0.0065 16.4 0.1 2.0 1 1 1 2 2 2 1 Leucine-rich repeat family 19 TM domain TMEM132D_C PF15706.5 ORF151629 - 0.0032 17.2 0.7 0.0078 16.0 0.5 1.7 1 1 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF5305 PF17231.2 ORF151629 - 0.0041 16.6 1.7 0.0046 16.4 0.4 1.6 1 1 1 2 2 2 1 Family of unknown function (DUF5305) Protocadherin PF08374.11 ORF151629 - 0.0054 16.7 0.3 0.0084 16.1 0.3 1.4 1 1 0 1 1 1 1 Protocadherin DUF4834 PF16118.5 ORF151629 - 0.0066 17.4 1.7 0.022 15.7 0.0 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4834) TarH PF02203.15 ORF151629 - 0.0085 16.0 0.2 0.028 14.4 0.0 1.7 2 0 0 2 2 2 1 Tar ligand binding domain homologue TMEM51 PF15345.6 ORF151629 - 0.012 15.5 0.3 0.015 15.1 0.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 TssO PF17561.2 ORF151629 - 0.013 15.6 0.0 0.024 14.7 0.0 1.4 1 0 0 1 1 1 0 Type VI secretion system, TssO CSG2 PF16965.5 ORF151629 - 0.015 14.3 0.4 0.016 14.1 0.4 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator SKN1 PF03935.15 ORF151629 - 0.017 13.5 0.0 0.023 13.1 0.0 1.1 1 0 0 1 1 1 0 Beta-glucan synthesis-associated protein (SKN1) SARAF PF06682.12 ORF151629 - 0.027 14.1 0.0 0.03 14.0 0.0 1.0 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Acatn PF13000.7 ORF151629 - 0.034 12.6 0.0 0.04 12.4 0.0 1.1 1 0 0 1 1 1 0 Acetyl-coenzyme A transporter 1 DUF4500 PF14937.6 ORF151629 - 0.037 14.0 0.0 0.077 13.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4500) EphA2_TM PF14575.6 ORF151629 - 0.048 14.5 0.1 0.1 13.5 0.0 1.6 2 0 0 2 2 1 0 Ephrin type-A receptor 2 transmembrane domain SID-1_RNA_chan PF13965.6 ORF151629 - 0.057 11.8 0.2 0.065 11.6 0.2 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 OAD_gamma PF04277.13 ORF151629 - 0.066 13.8 0.0 0.25 12.0 0.0 1.9 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Glycophorin_A PF01102.18 ORF151629 - 0.07 13.4 0.8 0.23 11.7 0.8 1.8 1 1 0 1 1 1 0 Glycophorin A FAM176 PF14851.6 ORF151629 - 0.075 12.7 1.8 0.075 12.7 0.2 1.7 1 1 1 2 2 2 0 FAM176 family DUF4133 PF13571.6 ORF151629 - 0.085 13.2 2.1 0.17 12.3 2.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) TMEM171 PF15471.6 ORF151629 - 0.096 11.7 0.1 0.12 11.3 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein family 171 DUF5093 PF17011.5 ORF151629 - 0.47 10.7 2.4 2.4 8.4 2.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF5093) Orf78 PF06024.12 ORF151629 - 3.1 8.1 7.0 0.46 10.8 0.4 2.1 1 1 1 2 2 2 0 Orf78 (ac78) EGF_3 PF12947.7 ORF151203 - 2.7 8.3 5.5 17 5.7 0.1 2.9 3 0 0 3 3 3 0 EGF domain Uds1 PF15456.6 ORF151175 - 0.041 14.0 15.5 0.073 13.2 6.1 2.1 1 1 1 2 2 2 0 Up-regulated During Septation DUF3498 PF12004.8 ORF151175 - 0.074 12.2 18.8 0.015 14.5 10.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3498) ZnuA PF01297.17 ORF151175 - 0.085 12.3 3.4 0.11 11.9 3.4 1.2 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic SHE3 PF17078.5 ORF151175 - 0.088 12.5 23.2 0.41 10.3 23.1 1.8 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 Transcrip_act PF04949.13 ORF151175 - 0.19 11.6 13.0 0.23 11.4 4.7 2.1 1 1 1 2 2 2 0 Transcriptional activator Spc7 PF08317.11 ORF151175 - 0.28 10.0 22.4 0.66 8.8 22.4 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein GAS PF13851.6 ORF151175 - 0.7 9.2 27.0 0.64 9.3 4.8 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding HrpB7 PF09486.10 ORF151175 - 0.71 10.3 6.4 1.1 9.7 0.5 2.1 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) Perilipin PF03036.16 ORF151175 - 1 8.3 9.6 1.2 8.1 9.6 1.0 1 0 0 1 1 1 0 Perilipin family BST2 PF16716.5 ORF151175 - 1.1 9.9 16.9 3.2 8.4 6.6 2.9 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 Atg14 PF10186.9 ORF151175 - 1.8 7.5 18.8 2.4 7.2 18.8 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DDHD PF02862.17 ORF151175 - 3 7.9 9.7 3.8 7.6 9.7 1.1 1 0 0 1 1 1 0 DDHD domain BLOC1_2 PF10046.9 ORF151175 - 3.8 7.9 17.1 2 8.8 7.4 2.7 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GLE1 PF07817.13 ORF151175 - 4.3 6.5 15.0 0.18 11.0 6.3 2.1 1 1 1 2 2 2 0 GLE1-like protein CCDC-167 PF15188.6 ORF151175 - 4.9 7.6 15.8 21 5.6 0.5 2.7 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 Prefoldin PF02996.17 ORF151175 - 6.1 6.8 18.8 0.51 10.3 4.7 3.3 1 1 3 4 4 4 0 Prefoldin subunit Exonuc_VII_L PF02601.15 ORF151175 - 6.4 6.2 15.4 8.2 5.9 15.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit ALMT PF11744.8 ORF151175 - 7.1 5.3 15.3 8.9 5.0 15.3 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Jnk-SapK_ap_N PF09744.9 ORF151175 - 9.5 6.4 20.9 11 6.3 15.8 2.1 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 HJURP_mid PF12346.8 ORF150106 - 0.011 16.2 0.6 0.021 15.3 0.6 1.4 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat DUF1972 PF09314.11 ORF14665 - 0.022 14.4 0.2 0.027 14.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1972) PaaX_C PF08223.11 ORF14665 - 0.044 14.1 0.2 0.1 12.9 0.1 1.6 2 0 0 2 2 2 0 PaaX-like protein C-terminal domain AAA_18 PF13238.6 ORF14665 - 0.1 13.2 0.9 0.13 12.8 0.9 1.3 1 0 0 1 1 1 0 AAA domain Uds1 PF15456.6 ORF144818 - 0.041 14.0 15.5 0.073 13.2 6.1 2.1 1 1 1 2 2 2 0 Up-regulated During Septation DUF3498 PF12004.8 ORF144818 - 0.074 12.2 18.8 0.015 14.5 10.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3498) ZnuA PF01297.17 ORF144818 - 0.085 12.3 3.4 0.11 11.9 3.4 1.2 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic SHE3 PF17078.5 ORF144818 - 0.088 12.5 23.2 0.41 10.3 23.1 1.8 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 Transcrip_act PF04949.13 ORF144818 - 0.19 11.6 13.0 0.23 11.4 4.7 2.1 1 1 1 2 2 2 0 Transcriptional activator Spc7 PF08317.11 ORF144818 - 0.28 10.0 22.4 0.66 8.8 22.4 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein GAS PF13851.6 ORF144818 - 0.7 9.2 27.0 0.64 9.3 4.8 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding HrpB7 PF09486.10 ORF144818 - 0.71 10.3 6.4 1.1 9.7 0.5 2.1 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) Perilipin PF03036.16 ORF144818 - 1 8.3 9.6 1.2 8.1 9.6 1.0 1 0 0 1 1 1 0 Perilipin family BST2 PF16716.5 ORF144818 - 1.1 9.9 16.9 3.2 8.4 6.6 2.9 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 Atg14 PF10186.9 ORF144818 - 1.8 7.5 18.8 2.4 7.2 18.8 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DDHD PF02862.17 ORF144818 - 3 7.9 9.7 3.8 7.6 9.7 1.1 1 0 0 1 1 1 0 DDHD domain BLOC1_2 PF10046.9 ORF144818 - 3.8 7.9 17.1 2 8.8 7.4 2.7 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GLE1 PF07817.13 ORF144818 - 4.3 6.5 15.0 0.18 11.0 6.3 2.1 1 1 1 2 2 2 0 GLE1-like protein CCDC-167 PF15188.6 ORF144818 - 4.9 7.6 15.8 21 5.6 0.5 2.7 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 Prefoldin PF02996.17 ORF144818 - 6.1 6.8 18.8 0.51 10.3 4.7 3.3 1 1 3 4 4 4 0 Prefoldin subunit Exonuc_VII_L PF02601.15 ORF144818 - 6.4 6.2 15.4 8.2 5.9 15.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit ALMT PF11744.8 ORF144818 - 7.1 5.3 15.3 8.9 5.0 15.3 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Jnk-SapK_ap_N PF09744.9 ORF144818 - 9.5 6.4 20.9 11 6.3 15.8 2.1 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 APC_N_CC PF16689.5 ORF144608 - 1.3 9.2 5.8 15 5.8 5.8 2.2 1 1 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain PsbH PF00737.20 ORF138036 - 7.6e-07 28.8 0.4 1.4e-06 28.0 0.4 1.4 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein DUF1011 PF06237.12 ORF138036 - 0.0093 16.3 0.0 1.6 9.1 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1011) Adeno_PV PF03910.13 ORF138036 - 0.036 12.8 0.0 0.046 12.4 0.0 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV Oxidored_q3 PF00499.20 ORF138036 - 0.065 12.9 0.4 0.065 12.9 0.4 1.4 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF138036 - 0.075 13.4 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized Ycf70-like DUF1298 PF06974.13 ORF13655 - 3e-09 37.0 0.0 3.8e-09 36.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) DAN PF03045.15 ORF13635 - 0.015 15.3 1.2 0.032 14.3 1.1 1.7 1 1 0 1 1 1 0 DAN domain HJURP_mid PF12346.8 ORF135807 - 0.011 16.2 0.6 0.021 15.3 0.6 1.4 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat KH_1 PF00013.29 ORF135616 - 1e-09 38.0 0.0 2.3e-09 36.9 0.0 1.6 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF135616 - 0.0069 16.2 0.0 0.015 15.1 0.0 1.6 1 0 0 1 1 1 1 KH domain DUF2457 PF10446.9 ORF135616 - 0.0073 15.5 8.3 0.0074 15.5 8.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2457) PTPRCAP PF15713.5 ORF135616 - 0.012 15.9 16.4 0.014 15.7 16.4 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated CobT PF06213.12 ORF135616 - 0.033 13.6 15.2 0.042 13.2 15.2 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT SID-1_RNA_chan PF13965.6 ORF135616 - 0.045 12.2 0.3 0.051 12.0 0.3 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF4820 PF16091.5 ORF135616 - 0.081 12.3 5.8 0.096 12.0 5.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) MAP17 PF15807.5 ORF135616 - 0.085 13.1 3.5 0.13 12.4 3.5 1.3 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF2052 PF09747.9 ORF135616 - 0.11 12.6 16.7 0.14 12.3 16.7 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Connexin PF00029.19 ORF135616 - 0.21 11.3 2.2 0.27 10.9 2.2 1.3 1 0 0 1 1 1 0 Connexin RR_TM4-6 PF06459.12 ORF135616 - 0.23 11.3 10.2 0.26 11.1 10.2 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 SDA1 PF05285.12 ORF135616 - 0.26 10.7 13.9 0.3 10.5 13.9 1.1 1 0 0 1 1 1 0 SDA1 DNA_pol_phi PF04931.13 ORF135616 - 0.29 9.2 19.8 0.34 9.0 19.8 1.1 1 0 0 1 1 1 0 DNA polymerase phi O-antigen_lig PF13425.6 ORF135616 - 0.35 9.6 1.3 0.41 9.4 1.3 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein CLN3 PF02487.17 ORF135616 - 0.74 8.8 1.7 0.88 8.5 1.7 1.1 1 0 0 1 1 1 0 CLN3 protein Serinc PF03348.15 ORF135616 - 0.86 8.5 2.6 1.1 8.2 2.6 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) Presenilin PF01080.17 ORF135616 - 1.2 7.9 8.5 1.3 7.7 8.5 1.1 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 ORF135616 - 2.9 7.0 3.9 3.1 6.9 3.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter V_ATPase_I PF01496.19 ORF135616 - 3.7 5.3 6.4 4.1 5.2 6.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CDC45 PF02724.14 ORF135616 - 4.9 5.3 13.9 6.1 5.0 13.9 1.1 1 0 0 1 1 1 0 CDC45-like protein Paf1 PF03985.13 ORF135616 - 5.7 5.8 19.8 7.7 5.4 19.8 1.1 1 0 0 1 1 1 0 Paf1 Hid1 PF12722.7 ORF135616 - 8.6 4.3 8.5 9.1 4.3 8.5 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF5308 PF17233.2 ORF135616 - 9 6.5 8.8 12 6.1 8.5 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5308) DUF229 PF02995.17 ORF133715 - 8.1e-10 37.9 0.3 1.1e-09 37.5 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF133715 - 1.4e-07 31.3 0.0 1.7e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 Sulfatase DegT_DnrJ_EryC1 PF01041.17 ORF131327 - 3.3e-14 53.0 0.0 3.9e-14 52.8 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 ORF131327 - 0.033 12.7 0.1 0.039 12.5 0.1 1.0 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme CEP19 PF14933.6 ORF131200 - 0.11 12.8 4.0 0.19 12.1 4.0 1.4 1 1 0 1 1 1 0 CEP19-like protein NUFIP1 PF10453.9 ORF128515 - 0.11 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1) zf-C2HC_2 PF13913.6 ORF128515 - 0.2 11.6 0.4 0.2 11.6 0.4 2.9 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-CCCH PF00642.24 ORF128017 - 3.5e-05 23.6 0.5 7.9e-05 22.5 0.5 1.6 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF128017 - 0.0035 17.3 0.7 0.0035 17.3 0.7 1.9 3 0 0 3 3 3 1 Zinc finger domain zf-CCCH_2 PF14608.6 ORF128017 - 0.017 15.6 1.4 0.04 14.4 1.4 1.7 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger DUF1771 PF08590.10 ORF128017 - 0.025 14.9 0.1 0.065 13.6 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1771) CARD PF00619.21 ORF128017 - 0.061 13.4 0.3 0.25 11.4 0.0 1.9 2 0 0 2 2 2 0 Caspase recruitment domain adh_short_C2 PF13561.6 ORF127120 - 2.6e-42 145.0 0.0 2.9e-42 144.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF127120 - 9.1e-29 100.3 0.0 1.1e-28 100.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase HJURP_mid PF12346.8 ORF126859 - 0.011 16.2 0.6 0.021 15.3 0.6 1.4 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat CAP PF00188.26 ORF125480 - 4.4e-05 24.3 0.0 6.6e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family Host_attach PF10116.9 ORF12411 - 4.3 7.9 8.6 0.42 11.2 2.5 2.0 1 1 1 2 2 2 0 Protein required for attachment to host cells Mu-conotoxin PF05374.12 ORF123775 - 0.68 10.0 9.4 0.12 12.4 3.0 2.5 3 0 0 3 3 3 0 Mu-Conotoxin MH1 PF03165.16 ORF122381 - 0.093 13.0 0.7 0.17 12.1 0.5 1.6 2 0 0 2 2 2 0 MH1 domain Colipase PF01114.18 ORF122271 - 0.21 11.3 11.8 0.14 11.9 1.2 3.2 3 0 0 3 3 3 0 Colipase, N-terminal domain VASt PF16016.5 ORF1207 - 2.1e-12 47.7 0.0 2.4e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain TctB PF07331.11 ORF119880 - 0.0092 16.2 5.0 0.017 15.4 5.0 1.4 1 1 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family Ost4 PF10215.9 ORF119880 - 0.042 13.7 0.5 0.29 11.0 0.1 2.4 2 0 0 2 2 2 0 Oligosaccaryltransferase cobW PF02492.19 ORF119487 - 0.14 11.7 0.3 0.2 11.2 0.3 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain TRAPP PF04051.16 ORF116620 - 8.5e-28 96.9 0.1 1e-27 96.7 0.1 1.0 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component SAP25 PF15476.6 ORF116526 - 0.012 15.3 0.2 0.016 14.9 0.2 1.3 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP25 DUF2016 PF09436.10 ORF115645 - 0.034 14.0 0.0 0.059 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) GAPES3 PF17154.4 ORF114991 - 0.024 14.6 1.1 3.7 7.5 0.1 2.2 2 0 0 2 2 2 0 Gammaproteobacterial periplasmic sensor domain AJAP1_PANP_C PF15298.6 ORF114754 - 0.2 11.9 5.0 8.1 6.6 0.0 2.7 3 0 0 3 3 3 0 AJAP1/PANP C-terminus NUMOD1 PF07453.13 ORF114192 - 0.024 14.9 2.5 9.3 6.6 0.0 3.8 4 0 0 4 4 4 0 NUMOD1 domain DUF3997 PF13162.6 ORF112562 - 0.1 12.9 0.3 0.31 11.4 0.3 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3997) TP_methylase PF00590.20 ORF112505 - 0.00029 20.8 0.1 0.0025 17.8 0.0 2.0 2 0 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Cloacin_immun PF03513.14 ORF112281 - 0.011 16.1 0.1 0.025 14.9 0.1 1.7 1 1 0 1 1 1 0 Cloacin immunity protein Prok-RING_4 PF14447.6 ORF111530 - 3.1e-05 23.7 7.3 3.1e-05 23.7 7.3 3.6 3 2 0 3 3 3 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF111530 - 5e-05 23.1 5.9 5e-05 23.1 5.9 4.5 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF111530 - 0.0079 16.0 5.3 0.0079 16.0 5.3 3.6 4 0 0 4 4 4 1 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 ORF111530 - 1.2 9.2 19.6 0.14 12.1 6.7 3.2 2 2 0 2 2 2 0 Transposase zinc-ribbon domain zf-UDP PF14569.6 ORF111530 - 6.4 7.0 18.2 3.4 7.8 2.1 3.1 2 1 1 3 3 3 0 Zinc-binding RING-finger Synaptobrevin PF00957.21 ORF110588 - 0.014 15.1 0.4 0.023 14.5 0.4 1.3 1 0 0 1 1 1 0 Synaptobrevin RRF_GI PF12614.8 ORF110588 - 0.14 12.3 0.4 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Ribosome recycling factor IlvGEDA_leader PF08046.11 ORF108196 - 1.4 8.4 3.4 24 4.5 0.3 2.6 2 0 0 2 2 2 0 IlvGEDA operon leader peptide Dam PF05869.11 ORF10614 - 2e-35 121.9 0.0 2.5e-35 121.6 0.0 1.1 1 0 0 1 1 1 1 DNA N-6-adenine-methyltransferase (Dam) zf-rbx1 PF12678.7 ORF105658 - 2e-05 24.8 5.2 3.2e-05 24.1 5.2 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF105658 - 5.5e-05 23.1 1.9 9.1e-05 22.4 1.9 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_2 PF13639.6 ORF105658 - 9.6e-05 22.6 3.1 0.00016 21.9 3.1 1.3 1 0 0 1 1 1 1 Ring finger domain RINGv PF12906.7 ORF105658 - 0.0083 16.2 4.7 0.014 15.5 4.7 1.4 1 0 0 1 1 1 1 RING-variant domain Vps39_2 PF10367.9 ORF105658 - 0.0095 16.4 0.0 4.5 7.8 0.0 2.3 2 0 0 2 2 2 2 Vacuolar sorting protein 39 domain 2 NCE101 PF11654.8 ORF105658 - 0.063 13.0 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 Non-classical export protein 1 UPF0542 PF15086.6 ORF105658 - 0.16 11.9 0.3 0.28 11.1 0.3 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 zf-C3HC4 PF00097.25 ORF105658 - 0.18 11.7 4.2 0.3 11.0 4.2 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF105658 - 0.21 11.6 2.6 0.35 10.9 2.6 1.3 1 0 0 1 1 1 0 zinc-RING finger domain FANCL_C PF11793.8 ORF105658 - 0.24 11.6 2.8 0.57 10.4 2.8 1.6 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_UBOX PF13445.6 ORF105658 - 0.45 10.6 2.6 0.57 10.3 1.7 1.6 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF105658 - 5 7.1 5.9 18 5.3 6.0 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Pam16 PF03656.13 ORF105331 - 4.5e-17 62.2 0.0 7.3e-17 61.6 0.0 1.4 1 0 0 1 1 1 1 Pam16 DUF603 PF04645.12 ORF105331 - 0.032 14.0 0.1 1 9.0 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function, DUF603 DUF3176 PF11374.8 ORF104580 - 0.022 14.9 0.6 0.047 13.9 0.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3176) DUF5383 PF17355.2 ORF104580 - 7.6 6.9 5.7 34 4.8 1.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5383) TssO PF17561.2 ORF104580 - 9.4 6.3 11.7 0.73 9.9 5.1 2.4 2 0 0 2 2 2 0 Type VI secretion system, TssO PsbH PF00737.20 ORF100626 - 8e-07 28.7 0.4 1.4e-06 28.0 0.4 1.4 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 ORF100626 - 0.041 13.6 1.0 0.065 12.9 0.4 1.5 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF100626 - 0.076 13.4 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Sdh_cyt PF01127.22 ORF100626 - 0.12 12.5 0.0 0.25 11.4 0.0 1.5 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SpoIID PF08486.10 ORF100121 - 0.034 14.7 0.2 0.1 13.2 0.2 1.8 1 1 0 1 1 1 0 Stage II sporulation protein PBP1_TM PF14812.6 ORF100121 - 0.099 13.0 5.3 0.16 12.4 5.3 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal NOA36 PF06524.12 ORF100121 - 3.1 7.0 4.3 3.9 6.7 4.3 1.1 1 0 0 1 1 1 0 NOA36 protein PEGSRP PF07623.11 NODE_42077_length_484_cov_2.069042_g34481_i0forward_frame_1 - 0.0065 16.2 6.0 0.0065 16.2 6.0 3.2 4 0 0 4 4 4 1 Protein of unknown function (DUF1584) zf-RING_2 PF13639.6 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 2.8e-06 27.5 5.4 7.2e-06 26.2 5.4 1.7 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 0.00043 20.0 4.4 0.00043 20.0 4.4 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 0.0022 17.8 7.5 0.003 17.4 6.1 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 0.0038 16.8 3.6 0.0083 15.7 3.6 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 0.086 13.1 9.5 0.5 10.7 9.5 2.1 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 0.13 12.1 6.9 0.32 10.9 6.9 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF4199 PF13858.6 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 0.14 12.5 0.4 0.19 12.1 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) zf-RING-like PF08746.11 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 0.16 12.3 5.8 0.49 10.7 5.6 1.9 1 1 0 1 1 1 0 RING-like domain Wzy_C PF04932.15 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 0.27 10.8 0.8 0.37 10.4 0.8 1.3 1 1 0 1 1 1 0 O-Antigen ligase zf-RING_5 PF14634.6 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 0.45 10.5 8.1 1.5 8.8 8.2 1.9 1 1 0 1 1 1 0 zinc-RING finger domain zf-RING_UBOX PF13445.6 NODE_42075_length_484_cov_2.300668_g34479_i0reverse_frame_1 - 1.4 9.0 7.5 3.7 7.7 7.5 1.7 1 0 0 1 1 1 0 RING-type zinc-finger Herpes_UL56 PF04534.12 NODE_42060_length_484_cov_5.164811_g34464_i0forward_frame_1 - 1.8 8.0 7.2 2.4 7.6 7.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL56 protein CAP-ZIP_m PF15255.6 NODE_42060_length_484_cov_5.164811_g34464_i0forward_frame_1 - 2 8.7 5.9 3.1 8.1 5.9 1.2 1 0 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region Acyl-CoA_ox_N PF14749.6 NODE_42050_length_484_cov_85.057906_g34454_i0forward_frame_1 - 0.14 12.7 1.7 0.2 12.2 0.6 1.8 1 1 0 2 2 2 0 Acyl-coenzyme A oxidase N-terminal TMEM108 PF15759.5 NODE_42045_length_484_cov_111.759465_g34449_i0reverse_frame_1 - 3.2 6.7 13.6 4.6 6.1 13.6 1.3 1 1 0 1 1 1 0 TMEM108 family DUF1746 PF08508.10 NODE_42039_length_484_cov_149.238307_g34443_i0forward_frame_1 - 0.0023 18.3 2.7 0.0024 18.2 0.7 2.0 1 1 1 2 2 2 1 Fungal domain of unknown function (DUF1746) Peptidase_M28 PF04389.17 NODE_42019_length_485_cov_2.137778_g34425_i0reverse_frame_1 - 0.00047 19.9 0.1 0.00058 19.6 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M28 Fip1 PF05182.13 NODE_42019_length_485_cov_2.137778_g34425_i0reverse_frame_1 - 0.06 12.9 0.2 0.13 11.8 0.2 1.6 1 0 0 1 1 1 0 Fip1 motif Moulting_cycle PF04870.16 NODE_42016_length_485_cov_2.342222_g34422_i0reverse_frame_1 - 0.0069 15.7 0.2 0.0084 15.4 0.2 1.1 1 0 0 1 1 1 1 Moulting cycle DUF5505 PF17610.2 NODE_42016_length_485_cov_2.342222_g34422_i0reverse_frame_1 - 0.0088 16.1 1.1 0.013 15.4 1.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5505) AceK PF06315.11 NODE_42009_length_485_cov_4.437778_g34415_i0reverse_frame_1 - 0.14 10.6 0.0 0.16 10.4 0.0 1.1 1 0 0 1 1 1 0 Isocitrate dehydrogenase kinase/phosphatase (AceK) DUF3099 PF11298.8 NODE_42008_length_485_cov_4.444444_g24367_i1forward_frame_1 - 6.6 7.0 8.1 0.32 11.2 0.6 2.5 2 2 1 3 3 3 0 Protein of unknown function (DUF3099) Pkinase PF00069.25 NODE_42003_length_485_cov_55.933333_g34410_i0reverse_frame_1 - 8.9e-10 38.4 0.0 1.2e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_42003_length_485_cov_55.933333_g34410_i0reverse_frame_1 - 0.00045 19.6 0.0 0.00063 19.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_42002_length_485_cov_61.515556_g34409_i0reverse_frame_1 - 1.4e-27 96.8 0.0 1.6e-27 96.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_42002_length_485_cov_61.515556_g34409_i0reverse_frame_1 - 1.5e-21 76.9 0.0 1.8e-21 76.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_42002_length_485_cov_61.515556_g34409_i0reverse_frame_1 - 0.057 12.7 0.0 0.069 12.5 0.0 1.2 1 0 0 1 1 1 0 Kinase-like MIF4G PF02854.19 NODE_42001_length_485_cov_67.793333_g34408_i0forward_frame_1 - 0.11 12.1 1.6 0.16 11.6 1.6 1.5 1 1 0 1 1 1 0 MIF4G domain DnaJ PF00226.31 NODE_41999_length_485_cov_77.131111_g34406_i0reverse_frame_1 - 6.2e-23 80.7 1.2 1.2e-22 79.8 1.2 1.5 1 0 0 1 1 1 1 DnaJ domain Chorion_2 PF03964.15 NODE_41995_length_485_cov_84.728889_g34402_i0reverse_frame_1 - 0.27 12.1 2.8 1 10.2 1.3 2.1 1 1 1 2 2 2 0 Chorion family 2 Holin_9 PF16936.5 NODE_41991_length_485_cov_96.191111_g34398_i0reverse_frame_1 - 0.12 12.5 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Putative holin PPR_long PF17177.4 NODE_41990_length_485_cov_100.762222_g34397_i0reverse_frame_1 - 0.088 12.2 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Prominin PF05478.11 NODE_41966_length_486_cov_1.463415_g34377_i0forward_frame_1 - 0.042 11.8 0.3 0.053 11.5 0.3 1.1 1 0 0 1 1 1 0 Prominin HV_small_capsid PF17086.5 NODE_41966_length_486_cov_1.463415_g34377_i0forward_frame_1 - 0.16 12.3 1.6 0.28 11.5 1.6 1.6 1 1 0 1 1 1 0 Small capsid protein of Herpesviridae SOR_SNZ PF01680.17 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_1 - 2.7 7.7 8.4 3.6 7.3 8.4 1.2 1 0 0 1 1 1 0 SOR/SNZ family CorA PF01544.18 NODE_41959_length_486_cov_2.889135_g34370_i0forward_frame_1 - 4.9e-38 131.1 0.0 5.3e-38 131.0 0.0 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Xan_ur_permease PF00860.20 NODE_41958_length_486_cov_3.161863_g34369_i0reverse_frame_1 - 0.01 14.6 0.3 0.012 14.3 0.3 1.1 1 0 0 1 1 1 1 Permease family CCSMST1 PF15013.6 NODE_41958_length_486_cov_3.161863_g34369_i0reverse_frame_1 - 0.053 13.7 0.0 0.13 12.4 0.0 1.7 1 0 0 1 1 1 0 CCSMST1 family FKBP_C PF00254.28 NODE_41945_length_486_cov_72.893570_g34356_i0reverse_frame_1 - 5.5e-08 33.0 0.0 8.8e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Pex24p PF06398.11 NODE_41912_length_487_cov_2.298673_g34327_i0reverse_frame_3 - 0.16 10.9 1.2 0.17 10.8 1.2 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF4227 PF14004.6 NODE_41912_length_487_cov_2.298673_g34327_i0reverse_frame_3 - 0.26 11.3 1.8 1.5 8.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) COX2_TM PF02790.15 NODE_41912_length_487_cov_2.298673_g34327_i0reverse_frame_3 - 3.9 7.7 5.5 14 5.9 1.2 2.2 1 1 1 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain ACAS_N PF16177.5 NODE_41911_length_487_cov_2.305310_g34326_i0forward_frame_2 - 0.1 12.5 0.2 0.24 11.4 0.0 1.6 2 0 0 2 2 2 0 Acetyl-coenzyme A synthetase N-terminus AA_permease_2 PF13520.6 NODE_41907_length_487_cov_3.871681_g34322_i0forward_frame_3 - 9.7e-17 60.9 19.0 1.1e-16 60.7 19.0 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 NODE_41907_length_487_cov_3.871681_g34322_i0forward_frame_3 - 1.9e-08 33.4 14.5 2.3e-08 33.1 14.5 1.0 1 0 0 1 1 1 1 Amino acid permease Tmemb_18A PF09771.9 NODE_41907_length_487_cov_3.871681_g34322_i0forward_frame_3 - 0.044 14.2 0.4 0.074 13.4 0.3 1.4 1 1 0 1 1 1 0 Transmembrane protein 188 XK-related PF09815.9 NODE_41907_length_487_cov_3.871681_g34322_i0forward_frame_3 - 4.5 6.2 11.3 32 3.4 11.3 1.9 1 1 0 1 1 1 0 XK-related protein KicB PF03882.14 NODE_41906_length_487_cov_4.207965_g34321_i0forward_frame_3 - 6.1e-59 197.3 0.1 8.3e-59 196.8 0.1 1.2 1 0 0 1 1 1 1 MukF winged-helix domain MukF_M PF17192.4 NODE_41906_length_487_cov_4.207965_g34321_i0forward_frame_3 - 3.5e-09 36.6 0.0 6.2e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 MukF middle domain HTH_27 PF13463.6 NODE_41906_length_487_cov_4.207965_g34321_i0forward_frame_3 - 0.092 13.2 0.0 0.18 12.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain Piwi PF02171.17 NODE_41901_length_487_cov_49.805310_g34316_i0forward_frame_2 - 4.4e-16 59.0 1.1 5.4e-16 58.7 1.1 1.0 1 0 0 1 1 1 1 Piwi domain DUF4241 PF14025.6 NODE_41895_length_487_cov_73.535398_g34310_i0forward_frame_3 - 1.6 8.9 5.4 0.36 11.1 0.5 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF4241) DX PF01666.17 NODE_41892_length_487_cov_80.800885_g34307_i0reverse_frame_3 - 0.085 13.3 0.8 6.4 7.3 0.1 2.2 2 0 0 2 2 2 0 DX module Peptidase_A22B PF04258.13 NODE_41889_length_487_cov_86.258850_g34304_i0forward_frame_2 - 1.9e-15 57.2 0.0 2.2e-15 57.0 0.0 1.1 1 0 0 1 1 1 1 Signal peptide peptidase DUF3335 PF11814.8 NODE_41888_length_487_cov_89.013274_g34303_i0reverse_frame_2 - 0.084 12.3 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 Peptidase_C39 like family UNC-79 PF14776.6 NODE_41885_length_487_cov_99.438053_g34300_i0reverse_frame_3 - 3.5 6.3 5.7 4.3 6.0 5.7 1.0 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 Thyroglobulin_1 PF00086.18 NODE_41885_length_487_cov_99.438053_g34300_i0reverse_frame_2 - 0.00096 18.8 0.0 0.0025 17.4 0.0 1.7 1 1 0 1 1 1 1 Thyroglobulin type-1 repeat SSP160 PF06933.11 NODE_41885_length_487_cov_99.438053_g34300_i0forward_frame_3 - 0.015 13.5 6.1 0.019 13.2 6.1 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Shisa PF13908.6 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 0.02 15.1 0.4 0.02 15.1 0.4 1.3 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator TRP PF06011.12 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 0.023 13.4 2.4 0.033 12.9 2.4 1.2 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF2569 PF10754.9 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 0.026 15.0 0.4 0.045 14.2 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) SDF PF00375.18 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 0.047 12.7 0.1 0.053 12.5 0.1 1.1 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family TMEM174 PF15029.6 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 0.12 12.1 0.7 0.16 11.7 0.7 1.3 1 1 0 1 1 1 0 Transmembrane protein 174 TMEM132D_C PF15706.5 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_3 - 4.2 7.2 6.2 0.78 9.6 1.0 2.2 2 1 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Pax7 PF12360.8 NODE_41884_length_487_cov_101.289823_g34299_i0reverse_frame_2 - 6.2 7.1 9.9 3.8 7.8 0.9 2.5 2 0 0 2 2 2 0 Paired box protein 7 MIF4G_like_2 PF09090.11 NODE_41884_length_487_cov_101.289823_g34299_i0forward_frame_2 - 0.27 10.7 0.5 0.35 10.3 0.5 1.1 1 0 0 1 1 1 0 MIF4G like Agenet PF05641.12 NODE_41873_length_487_cov_148.845133_g34288_i0forward_frame_3 - 0.00051 20.5 0.0 0.00085 19.7 0.0 1.4 1 0 0 1 1 1 1 Agenet domain SH3_15 PF18346.1 NODE_41873_length_487_cov_148.845133_g34288_i0forward_frame_3 - 0.012 15.9 0.0 0.043 14.1 0.1 1.9 2 0 0 2 2 2 0 Mind bomb SH3 repeat domain Methyltransf_16 PF10294.9 NODE_41867_length_487_cov_234.223451_g34282_i0reverse_frame_3 - 3.6e-11 43.1 0.0 4e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase PrmA PF06325.13 NODE_41867_length_487_cov_234.223451_g34282_i0reverse_frame_3 - 4.6e-06 26.2 0.0 5.5e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 NODE_41867_length_487_cov_234.223451_g34282_i0reverse_frame_3 - 0.021 14.6 0.0 0.023 14.5 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 NODE_41867_length_487_cov_234.223451_g34282_i0reverse_frame_3 - 0.024 14.2 0.0 0.031 13.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Rhomboid_SP PF12595.8 NODE_41850_length_488_cov_2.105960_g34266_i0forward_frame_2 - 0.17 11.2 0.1 0.27 10.6 0.1 1.3 1 0 0 1 1 1 0 Rhomboid serine protease DUF4476 PF14771.6 NODE_41846_length_488_cov_2.973510_g34262_i0reverse_frame_3 - 0.01 16.1 0.2 0.017 15.4 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4476) DUF1564 PF07600.11 NODE_41846_length_488_cov_2.973510_g34262_i0reverse_frame_3 - 0.015 15.0 0.1 0.026 14.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) HTH_Tnp_Tc5 PF03221.16 NODE_41846_length_488_cov_2.973510_g34262_i0reverse_frame_3 - 0.055 13.5 0.1 0.095 12.7 0.1 1.5 1 1 0 1 1 1 0 Tc5 transposase DNA-binding domain DUF4870 PF09685.10 NODE_41844_length_488_cov_3.370861_g34260_i0forward_frame_3 - 0.04 14.0 6.6 0.052 13.7 6.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4870) CitMHS PF03600.16 NODE_41844_length_488_cov_3.370861_g34260_i0forward_frame_3 - 0.054 12.7 0.1 0.055 12.7 0.1 1.0 1 0 0 1 1 1 0 Citrate transporter DNA_gyraseB PF00204.25 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.016 14.7 2.0 0.025 14.1 1.3 1.6 1 1 0 1 1 1 0 DNA gyrase B TPR_MLP1_2 PF07926.12 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.03 14.4 16.7 1.1 9.4 10.6 2.1 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein Mod_r PF07200.13 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.043 13.9 11.4 0.73 9.9 11.7 2.4 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Sec34 PF04136.15 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.046 13.6 6.0 0.27 11.1 0.3 2.1 1 1 1 2 2 2 0 Sec34-like family DUF4407 PF14362.6 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.081 12.3 12.3 0.11 11.8 12.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SOR_SNZ PF01680.17 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.11 12.3 2.5 0.12 12.1 0.1 2.0 2 1 0 2 2 2 0 SOR/SNZ family Com_YlbF PF06133.11 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.12 13.0 16.2 0.79 10.3 4.7 2.4 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA APG6_N PF17675.1 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.13 12.7 19.8 1.3 9.5 13.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF1664 PF07889.12 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.17 11.9 8.3 1.5 8.9 2.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Golgin_A5 PF09787.9 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.23 10.9 15.3 0.27 10.7 15.3 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 PRKG1_interact PF15898.5 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.33 11.9 15.3 2.4 9.1 14.0 2.2 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Macoilin PF09726.9 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.42 9.1 11.6 0.43 9.1 11.6 1.1 1 0 0 1 1 1 0 Macoilin family DUF3452 PF11934.8 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.46 10.1 2.6 0.75 9.4 2.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) GvpG PF05120.12 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.51 10.4 5.4 2.4 8.2 1.4 2.7 2 1 0 2 2 2 0 Gas vesicle protein G V_ATPase_I PF01496.19 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.77 7.6 8.2 0.88 7.4 8.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TSNAXIP1_N PF15739.5 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 0.96 9.9 10.7 54 4.2 10.2 2.4 1 1 0 1 1 1 0 Translin-associated factor X-interacting N-terminus Fzo_mitofusin PF04799.13 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 2.6 7.6 8.8 6.9 6.2 4.3 2.4 1 1 2 3 3 3 0 fzo-like conserved region DUF2951 PF11166.8 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 2.6 8.3 12.9 2.6 8.3 1.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) Seryl_tRNA_N PF02403.22 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 2.8 8.2 17.9 82 3.5 0.3 2.8 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Bap31_Bap29_C PF18035.1 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 2.9 8.0 15.9 1.7e+02 2.3 12.1 3.4 2 1 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain Fib_alpha PF08702.10 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 3.1 8.0 9.1 4.3 7.5 8.4 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ZapB PF06005.12 NODE_41826_length_488_cov_92.596026_g34242_i0reverse_frame_3 - 4.6 7.8 14.7 34 5.0 13.7 2.5 1 1 0 1 1 1 0 Cell division protein ZapB CobW_C PF07683.14 NODE_41824_length_488_cov_101.236203_g34240_i0reverse_frame_2 - 0.049 13.6 0.1 0.091 12.7 0.1 1.5 1 0 0 1 1 1 0 Cobalamin synthesis protein cobW C-terminal domain Methyltransf_8 PF05148.15 NODE_41820_length_488_cov_107.134658_g34236_i0forward_frame_2 - 1.1e-33 117.0 1.0 4.1e-33 115.1 1.0 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_11 PF08241.12 NODE_41820_length_488_cov_107.134658_g34236_i0forward_frame_2 - 2.7e-07 31.1 0.0 5.5e-07 30.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_41820_length_488_cov_107.134658_g34236_i0forward_frame_2 - 0.00011 22.8 0.0 0.00021 21.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 NODE_41820_length_488_cov_107.134658_g34236_i0forward_frame_2 - 0.047 13.0 0.0 0.057 12.7 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 NODE_41820_length_488_cov_107.134658_g34236_i0forward_frame_2 - 0.096 12.5 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_41820_length_488_cov_107.134658_g34236_i0forward_frame_2 - 0.18 12.6 0.0 0.4 11.4 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain LCE PF14672.6 NODE_41813_length_488_cov_159.099338_g26964_i1reverse_frame_3 - 0.065 13.8 5.4 2 9.1 0.7 2.4 1 1 1 2 2 2 0 Late cornified envelope ORC5_C PF14630.6 NODE_41813_length_488_cov_159.099338_g26964_i1forward_frame_2 - 0.2 11.1 0.1 0.23 10.9 0.1 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus Rep_fac-A_C PF08646.10 NODE_41810_length_488_cov_188.894040_g34227_i0forward_frame_3 - 0.079 12.7 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 Replication factor-A C terminal domain GTP_EFTU_D3 PF03143.17 NODE_41807_length_488_cov_239.520971_g34225_i0reverse_frame_3 - 3.3e-26 91.8 0.1 5.4e-26 91.1 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain CxC1 PF18802.1 NODE_41805_length_488_cov_282.969095_g34223_i0reverse_frame_2 - 0.019 15.1 0.0 0.039 14.1 0.0 1.5 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases Sre PF03125.18 NODE_41805_length_488_cov_282.969095_g34223_i0forward_frame_2 - 0.057 12.6 0.5 0.079 12.1 0.5 1.1 1 0 0 1 1 1 0 C. elegans Sre G protein-coupled chemoreceptor LSM PF01423.22 NODE_41804_length_488_cov_346.958057_g32043_i1forward_frame_3 - 8.6e-13 47.8 0.4 1.6e-12 46.9 0.2 1.6 2 0 0 2 2 2 1 LSM domain Hfq PF17209.3 NODE_41804_length_488_cov_346.958057_g32043_i1forward_frame_3 - 0.19 11.4 0.0 0.3 10.7 0.0 1.3 1 0 0 1 1 1 0 Hfq protein Methyltransf_25 PF13649.6 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 3e-08 34.3 0.0 4.4e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 3.6e-06 26.9 0.0 5.1e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 3.7e-05 24.3 0.0 5.6e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.0017 18.3 0.0 0.0024 17.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.0032 16.8 0.0 0.0045 16.3 0.0 1.3 1 1 0 1 1 1 1 O-methyltransferase domain FtsJ PF01728.19 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.0075 16.4 0.4 0.012 15.7 0.0 1.5 2 0 0 2 2 2 1 FtsJ-like methyltransferase MTS PF05175.14 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.0086 15.6 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Met_10 PF02475.16 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.009 15.8 0.0 0.011 15.4 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_12 PF08242.12 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.011 16.4 0.0 0.017 15.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.013 15.3 0.0 0.016 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CheR PF01739.18 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.022 14.3 0.0 0.041 13.4 0.0 1.4 1 1 0 1 1 1 0 CheR methyltransferase, SAM binding domain UPF0020 PF01170.18 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.044 13.5 0.0 0.05 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.6 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.19 11.6 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 NODE_41791_length_489_cov_2.171806_g34214_i0reverse_frame_3 - 0.25 10.6 0.0 0.34 10.2 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase DEAD PF00270.29 NODE_41790_length_489_cov_2.350220_g34213_i0reverse_frame_2 - 9.7e-28 97.1 0.0 1.1e-27 96.9 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 NODE_41790_length_489_cov_2.350220_g34213_i0reverse_frame_2 - 0.00022 21.3 0.0 0.00025 21.1 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Dicty_REP PF05086.12 NODE_41786_length_489_cov_2.572687_g34209_i0reverse_frame_3 - 0.065 11.2 2.0 0.069 11.1 2.0 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein DnaB_C PF03796.15 NODE_41786_length_489_cov_2.572687_g34209_i0reverse_frame_2 - 0.0038 16.6 0.1 0.0056 16.1 0.1 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain NolV PF06635.12 NODE_41780_length_489_cov_3.444934_g34203_i0reverse_frame_2 - 0.17 11.2 0.1 0.23 10.8 0.1 1.2 1 0 0 1 1 1 0 Nodulation protein NolV DUF3311 PF11755.8 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 0.019 14.9 2.2 0.019 14.9 2.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3311) UPF0182 PF03699.13 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 0.11 10.6 6.5 0.14 10.3 6.5 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) DUF929 PF06053.11 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 1 8.6 12.0 0.68 9.2 2.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF929) TMEM132D_C PF15706.5 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 2.2 8.1 5.5 4.1 7.2 0.3 2.2 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TadF PF16964.5 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 3.4 7.4 7.3 0.12 12.1 0.2 1.8 2 0 0 2 2 2 0 Putative tight adherence pilin protein F EphA2_TM PF14575.6 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_3 - 7 7.6 20.7 10 7.1 4.1 2.3 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Apt1 PF10351.9 NODE_41777_length_489_cov_17.784141_g34200_i0forward_frame_2 - 0.19 10.6 2.7 0.18 10.6 2.7 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Gal_Lectin PF02140.18 NODE_41776_length_489_cov_39.079295_g34199_i0reverse_frame_2 - 0.32 11.5 4.0 0.42 11.1 0.4 2.3 2 0 0 2 2 2 0 Galactose binding lectin domain DUF2746 PF10874.8 NODE_41774_length_489_cov_51.951542_g34197_i0reverse_frame_3 - 0.034 14.5 0.2 0.055 13.9 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2746) RhoGEF67_u1 PF16615.5 NODE_41774_length_489_cov_51.951542_g34197_i0reverse_frame_2 - 6.7 7.3 8.5 11 6.6 1.2 2.8 3 0 0 3 3 3 0 Unstructured region one on RhoGEF 6 and 7 Vps55 PF04133.14 NODE_41774_length_489_cov_51.951542_g34197_i0forward_frame_3 - 0.091 12.7 13.5 0.049 13.6 10.5 2.2 1 1 0 1 1 1 0 Vacuolar protein sorting 55 RPAP2_Rtr1 PF04181.13 NODE_41773_length_489_cov_52.669604_g34196_i0reverse_frame_3 - 0.057 13.8 0.1 0.083 13.2 0.1 1.4 1 0 0 1 1 1 0 Rtr1/RPAP2 family DUF4293 PF14126.6 NODE_41772_length_489_cov_61.645374_g34195_i0reverse_frame_2 - 1 9.6 7.8 0.39 11.0 0.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4293) ETRAMP PF09716.10 NODE_41765_length_489_cov_78.693833_g34188_i0forward_frame_2 - 4.1 7.5 11.7 12 6.0 11.7 1.7 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) NOA36 PF06524.12 NODE_41758_length_489_cov_123.365639_g34181_i0reverse_frame_3 - 2.9 7.2 5.9 3.6 6.8 5.9 1.1 1 0 0 1 1 1 0 NOA36 protein 7TMR-DISM_7TM PF07695.11 NODE_41757_length_489_cov_125.068282_g34180_i0reverse_frame_2 - 0.63 9.9 9.8 0.96 9.3 9.8 1.3 1 0 0 1 1 1 0 7TM diverse intracellular signalling DPPIV_N PF00930.21 NODE_41757_length_489_cov_125.068282_g34180_i0forward_frame_2 - 0.048 12.4 0.0 0.064 12.0 0.0 1.1 1 0 0 1 1 1 0 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF3280 PF11684.8 NODE_41738_length_489_cov_3437.466960_g34163_i0forward_frame_3 - 0.096 13.1 0.1 0.14 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2380) APG17 PF04108.12 NODE_41736_length_489_cov_4092.724670_g25447_i4reverse_frame_2 - 0.0083 15.3 0.3 0.009 15.2 0.3 1.0 1 0 0 1 1 1 1 Autophagy protein Apg17 CLZ PF16526.5 NODE_41736_length_489_cov_4092.724670_g25447_i4reverse_frame_2 - 0.15 12.4 0.2 0.15 12.4 0.2 1.9 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels APOBEC3 PF18771.1 NODE_41736_length_489_cov_4092.724670_g25447_i4forward_frame_3 - 0.089 12.9 0.1 0.13 12.4 0.1 1.2 1 0 0 1 1 1 0 APOBEC3 FIT1_2 PF17357.2 NODE_41735_length_489_cov_5133.367841_g34161_i0forward_frame_2 - 0.39 10.8 4.9 8.8 6.5 0.2 2.2 2 0 0 2 2 2 0 Facilitor Of iron transport 1 and 2 Ribosomal_L18 PF17135.4 ORF99106 - 0.0062 15.9 0.4 0.0095 15.3 0.4 1.4 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e DUF3242 PF11586.8 ORF98713 - 0.0015 18.3 0.9 0.0015 18.3 0.9 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3242) GCHY-1 PF02649.14 ORF96576 - 6.5 6.2 6.0 1.6 8.1 1.8 1.8 1 1 1 2 2 2 0 Type I GTP cyclohydrolase folE2 Fig1 PF12351.8 ORF92754 - 0.024 14.5 0.2 0.029 14.3 0.2 1.2 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 EF-hand_1 PF00036.32 ORF91161 - 5.5e-09 35.0 0.0 0.0014 18.0 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF91161 - 1e-08 34.4 0.1 0.00054 19.7 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF91161 - 3.1e-07 29.6 0.1 0.017 14.6 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF91161 - 2e-05 24.9 0.1 0.079 13.4 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF91161 - 0.0029 17.4 0.1 2.7 7.9 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF91161 - 0.12 12.7 0.0 0.31 11.4 0.0 1.6 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region PseudoU_synth_2 PF00849.22 ORF90903 - 0.18 11.9 0.1 0.23 11.5 0.1 1.2 1 0 0 1 1 1 0 RNA pseudouridylate synthase SNARE PF05739.19 ORF90571 - 2.2e-09 37.2 0.7 2.2e-09 37.2 0.7 2.4 2 1 0 2 2 2 1 SNARE domain PBP1_TM PF14812.6 ORF90571 - 0.0042 17.4 3.4 0.17 12.3 1.2 2.2 2 0 0 2 2 2 2 Transmembrane domain of transglycosylase PBP1 at N-terminal Orf78 PF06024.12 ORF90571 - 0.019 15.2 2.7 0.041 14.2 0.3 2.1 2 0 0 2 2 2 0 Orf78 (ac78) DUF3675 PF12428.8 ORF90571 - 0.02 15.4 1.5 0.036 14.6 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3675) P16-Arc PF04699.14 ORF90571 - 0.038 14.5 1.4 0.06 13.8 1.4 1.3 1 0 0 1 1 1 0 ARP2/3 complex 16 kDa subunit (p16-Arc) Spore_III_AF PF09581.10 ORF90571 - 0.15 12.1 6.0 0.22 11.5 5.7 1.4 1 1 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Dak2 PF02734.17 ORF90571 - 0.18 11.7 0.8 0.28 11.1 0.8 1.3 1 0 0 1 1 1 0 DAK2 domain Cyt-b5 PF00173.28 ORF88951 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF88951 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Ras PF00071.22 ORF88018 - 8.5e-40 136.0 0.2 1e-39 135.7 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF88018 - 1.8e-19 70.1 0.1 2.7e-19 69.6 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF88018 - 9e-12 44.8 0.1 1.2e-11 44.4 0.1 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF88018 - 1.1e-05 25.0 0.0 2.1e-05 24.2 0.0 1.3 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain B1 PF02246.15 ORF88018 - 0.072 13.1 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein L b1 domain Cyt-b5 PF00173.28 ORF87790 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF87790 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Thioredoxin PF00085.20 ORF87056 - 4.2e-28 97.3 0.1 5.6e-28 96.9 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF87056 - 6.3e-07 29.8 0.1 2.3e-06 28.0 0.1 1.8 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_9 PF14595.6 ORF87056 - 2.9e-05 23.8 0.0 3.9e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF87056 - 8.3e-05 22.8 0.0 0.00032 21.0 0.0 1.8 1 1 0 1 1 1 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF87056 - 0.0017 17.8 0.0 0.0025 17.2 0.0 1.2 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Redoxin PF08534.10 ORF87056 - 0.0017 18.1 0.2 0.11 12.2 0.1 2.1 1 1 1 2 2 2 1 Redoxin TraF PF13728.6 ORF87056 - 0.005 16.7 0.0 0.0055 16.6 0.0 1.2 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_7 PF13899.6 ORF87056 - 0.0085 16.3 0.0 0.014 15.6 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like Phosducin PF02114.16 ORF87056 - 0.013 14.4 0.0 0.017 14.1 0.0 1.1 1 0 0 1 1 1 0 Phosducin AhpC-TSA PF00578.21 ORF87056 - 0.014 15.4 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA family Glutaredoxin PF00462.24 ORF87056 - 0.096 12.9 0.2 0.19 12.0 0.2 1.5 1 1 0 1 1 1 0 Glutaredoxin DUF4133 PF13571.6 ORF86857 - 0.039 14.3 0.1 0.054 13.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) MDMPI_N PF11716.8 ORF86695 - 0.022 15.4 3.8 0.036 14.7 3.8 1.3 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain Sm_multidrug_ex PF06695.11 ORF86501 - 1.4e-21 77.3 1.5 1.4e-21 77.3 1.5 1.8 2 0 0 2 2 2 1 Putative small multi-drug export protein PHO4 PF01384.20 ORF86501 - 0.12 11.4 4.3 0.14 11.2 4.3 1.1 1 0 0 1 1 1 0 Phosphate transporter family Cyt-b5 PF00173.28 ORF86114 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DUF1732 PF08340.11 ORF84293 - 0.0068 16.4 3.4 0.0068 16.4 3.4 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF1732) Sec8_exocyst PF04048.14 ORF84293 - 0.012 15.5 9.5 0.013 15.4 2.3 2.1 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain DUF812 PF05667.11 ORF84293 - 0.029 13.3 13.2 0.032 13.1 13.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Fez1 PF06818.15 ORF84293 - 0.11 13.0 11.5 0.13 12.7 10.9 1.4 1 1 0 1 1 1 0 Fez1 DUF724 PF05266.14 ORF84293 - 0.19 11.5 14.5 2.9 7.7 6.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) YabA PF06156.13 ORF84293 - 0.63 10.7 11.9 0.1 13.3 5.8 2.1 1 1 1 2 2 2 0 Initiation control protein YabA CCAP PF11105.8 ORF84293 - 0.67 9.9 5.3 0.16 11.9 1.9 1.6 2 0 0 2 2 2 0 Arthropod cardioacceleratory peptide 2a DivIC PF04977.15 ORF84293 - 0.77 9.6 12.0 3.7 7.4 3.6 2.5 2 0 0 2 2 2 0 Septum formation initiator Spc7 PF08317.11 ORF84293 - 0.94 8.3 16.9 0.92 8.3 13.0 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF5339 PF17274.2 ORF84293 - 2.2 9.2 7.3 8.8 7.3 0.6 2.8 2 1 1 3 3 3 0 Family of unknown function (DUF5339) Phlebovirus_NSM PF07246.11 ORF84293 - 2.3 7.5 14.9 1.4 8.3 3.3 2.0 1 1 1 2 2 2 0 Phlebovirus nonstructural protein NS-M CENP-H PF05837.12 ORF84293 - 3.2 8.2 10.2 17 5.8 9.5 2.0 1 1 0 1 1 1 0 Centromere protein H (CENP-H) APG6_N PF17675.1 ORF84293 - 4.8 7.7 20.2 1.9 9.0 14.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF84293 - 5.5 4.8 9.1 6.9 4.5 9.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 ORF84293 - 6.3 6.8 10.0 1.6 8.8 2.7 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Glu-tRNAGln PF02686.15 ORF84293 - 7.8 6.9 7.9 3.3 8.1 0.2 3.3 2 1 1 3 3 3 0 Glu-tRNAGln amidotransferase C subunit DUF4446 PF14584.6 ORF84293 - 9.5 6.2 9.0 5.7 6.9 1.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) PARP PF00644.20 ORF8388 - 1.4e-18 67.2 0.0 1.9e-18 66.7 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain KIAA1430 PF13879.6 ORF80934 - 0.0013 19.5 4.1 0.0019 18.9 4.1 1.4 1 0 0 1 1 1 1 KIAA1430 homologue mRNA_stabil PF13929.6 ORF80934 - 0.025 13.5 0.3 0.03 13.3 0.3 1.1 1 0 0 1 1 1 0 mRNA stabilisation Euplotes_phero PF05842.11 ORF80934 - 0.072 13.7 0.8 0.11 13.0 0.8 1.2 1 0 0 1 1 1 0 Euplotes octocarinatus mating pheromone protein Epiglycanin_C PF14654.6 ORF80883 - 0.046 13.8 0.3 0.071 13.2 0.3 1.4 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region Cyt-b5 PF00173.28 ORF79321 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF79321 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 MDH PF02315.16 ORF78544 - 0.009 16.1 0.0 0.013 15.6 0.0 1.3 1 0 0 1 1 1 1 Methanol dehydrogenase beta subunit Ccdc124 PF06244.12 ORF78062 - 0.052 14.1 0.1 0.072 13.7 0.1 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 124 /Oxs1 Cyt-b5 PF00173.28 ORF77949 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF77949 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 PHD PF00628.29 ORF77943 - 0.0004 20.2 12.6 0.0007 19.4 12.6 1.4 1 0 0 1 1 1 1 PHD-finger zf-4CXXC_R1 PF10497.9 ORF77943 - 0.0028 17.8 6.9 0.0039 17.4 6.9 1.3 1 0 0 1 1 1 1 Zinc-finger domain of monoamine-oxidase A repressor R1 zf-PARP PF00645.18 ORF77943 - 1.8 9.5 13.0 1.2 10.1 5.5 2.6 1 1 1 2 2 2 0 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region DUF3496 PF12001.8 ORF77943 - 7.3 7.0 9.7 15 6.0 2.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3496) ZYG-11_interact PF05884.12 ORF7771 - 0.073 12.5 0.1 0.092 12.1 0.1 1.1 1 0 0 1 1 1 0 Interactor of ZYG-11 Cyt-b5 PF00173.28 ORF77659 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF77659 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF4473 PF14747.6 ORF77595 - 0.077 13.6 0.1 0.25 11.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4473) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks154.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks154.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks154.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks154.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:04:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cyt-b5 PF00173.28 ORF76824 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain MGTL PF17059.5 ORF7654 - 8e-09 34.8 13.1 9.3e-09 34.6 8.6 2.6 2 0 0 2 2 2 1 MgtA leader peptide DUF2975 PF11188.8 ORF75093 - 0.31 10.9 8.3 0.48 10.3 2.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2975) 2TM PF13239.6 ORF75093 - 3.4 8.1 9.9 0.45 10.8 0.9 2.2 2 0 0 2 2 2 0 2TM domain MRAP PF15183.6 ORF75093 - 5.9 6.9 7.6 0.99 9.4 2.4 2.1 2 0 0 2 2 2 0 Melanocortin-2 receptor accessory protein family Cnd1 PF12717.7 ORF7469 - 0.16 12.0 2.3 0.46 10.5 0.6 2.1 1 1 1 2 2 2 0 non-SMC mitotic condensation complex subunit 1 GCHY-1 PF02649.14 ORF73219 - 6.5 6.2 6.0 1.6 8.1 1.8 1.8 1 1 1 2 2 2 0 Type I GTP cyclohydrolase folE2 Sec63 PF02889.16 ORF7288 - 0.041 13.0 0.2 0.05 12.8 0.2 1.1 1 0 0 1 1 1 0 Sec63 Brl domain Bac_chlorC PF02043.17 ORF7288 - 0.16 12.0 0.5 0.32 11.0 0.2 1.7 2 0 0 2 2 2 0 Bacteriochlorophyll C binding protein Ax_dynein_light PF10211.9 ORF72543 - 5.7e-59 199.2 0.3 6.6e-59 199.0 0.3 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain SnAC PF14619.6 ORF72245 - 1.4e-08 35.2 3.1 1.4e-08 35.2 3.1 3.1 2 1 1 3 3 3 1 Snf2-ATP coupling, chromatin remodelling complex Cyt-b5 PF00173.28 ORF71365 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF71365 - 0.16 12.5 1.0 0.82 10.2 0.3 2.2 2 1 0 2 2 2 0 Pet100 zf-UBR PF02207.20 ORF71197 - 0.26 11.5 4.3 0.89 9.8 2.5 2.2 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) TNFR_16_TM PF18422.1 ORF70693 - 0.12 12.4 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain UPF0547 PF10571.9 ORF70693 - 0.24 11.5 0.6 0.24 11.5 0.6 1.9 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 PMT_4TMC PF16192.5 ORF70262 - 0.63 9.6 8.4 0.92 9.1 8.4 1.3 1 0 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase DB PF01682.19 ORF7012 - 0.3 11.4 4.3 0.67 10.3 0.1 2.3 2 0 0 2 2 2 0 DB module CitMHS PF03600.16 ORF66553 - 0.051 12.8 0.1 0.054 12.7 0.1 1.1 1 0 0 1 1 1 0 Citrate transporter zf-C2H2 PF00096.26 ORF65085 - 1e-10 41.5 15.7 1.5e-05 25.2 2.6 2.9 3 0 0 3 3 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF65085 - 1.2e-08 35.1 14.0 0.00019 22.0 1.7 3.1 3 0 0 3 3 2 2 C2H2-type zinc finger zf-BED PF02892.15 ORF65085 - 0.00015 21.7 11.5 0.00093 19.2 5.4 2.5 1 1 1 2 2 2 2 BED zinc finger zf-C2H2_11 PF16622.5 ORF65085 - 0.00016 21.4 4.8 0.17 11.7 0.1 2.4 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-H2C2_2 PF13465.6 ORF65085 - 0.00085 19.6 18.0 0.0081 16.6 0.3 3.7 3 1 0 3 3 3 1 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF65085 - 0.0043 16.8 16.5 0.49 10.2 1.2 3.4 2 1 0 2 2 2 2 C2H2-type zinc-finger domain zf-Di19 PF05605.12 ORF65085 - 0.0057 16.9 1.0 0.047 14.0 1.0 2.3 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_2 PF12756.7 ORF65085 - 0.013 15.9 8.4 0.23 11.8 0.3 2.7 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 ORF65085 - 0.015 15.6 7.3 0.62 10.4 0.6 2.9 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF65085 - 0.016 15.6 5.4 0.35 11.3 0.7 2.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2HE PF16278.5 ORF65085 - 0.017 15.6 0.9 0.017 15.6 0.9 2.2 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-MYST PF17772.1 ORF65085 - 0.039 13.5 1.9 0.2 11.3 0.3 2.4 2 0 0 2 2 2 0 MYST family zinc finger domain zf-C2H2_3rep PF18868.1 ORF65085 - 0.063 14.0 3.9 0.17 12.6 3.8 1.8 1 1 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats FYVE PF01363.21 ORF65085 - 0.13 12.5 7.4 2.2 8.5 0.6 2.4 1 1 1 2 2 2 0 FYVE zinc finger zf-C2H2_6 PF13912.6 ORF65085 - 0.46 10.5 12.6 2.8 8.1 2.5 2.7 2 0 0 2 2 2 0 C2H2-type zinc finger Actin_micro PF17003.5 ORF65085 - 1.5 8.0 5.2 1.8 7.6 0.3 2.1 1 1 1 2 2 2 0 Putative actin-like family zf-UBR PF02207.20 ORF63908 - 0.26 11.5 4.3 0.89 9.8 2.5 2.2 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Proteasome PF00227.26 ORF63850 - 8.2e-44 149.4 0.0 9.2e-44 149.2 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit Cyt-b5 PF00173.28 ORF62502 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF62502 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF62492 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF62492 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Sod_Ni PF09055.11 ORF60856 - 0.0036 17.9 2.1 0.16 12.5 0.0 2.3 2 0 0 2 2 2 2 Nickel-containing superoxide dismutase Cyt-b5 PF00173.28 ORF59963 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF59963 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Se-cys_synth_N PF12390.8 ORF5883 - 0.051 13.8 0.8 1.9 8.8 0.1 2.9 2 0 0 2 2 2 0 Selenocysteine synthase N terminal LIF_OSM PF01291.17 ORF58813 - 0.11 12.6 0.0 0.26 11.4 0.0 1.6 2 0 0 2 2 2 0 LIF / OSM family BDHCT PF08072.11 ORF58813 - 0.11 12.6 0.5 0.11 12.6 0.5 2.2 3 0 0 3 3 3 0 BDHCT (NUC031) domain Rrf2 PF02082.20 ORF56311 - 1.8e-27 95.5 0.0 3.1e-27 94.7 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 ORF56311 - 0.0058 16.5 0.0 0.01 15.7 0.0 1.4 1 0 0 1 1 1 1 MarR family HrcA_DNA-bdg PF03444.15 ORF56311 - 0.009 15.6 0.3 0.015 15.0 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_24 PF13412.6 ORF56311 - 0.018 14.6 0.0 0.033 13.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_47 PF16221.5 ORF56311 - 0.076 12.6 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 winged helix-turn-helix HTH_AraC PF00165.23 ORF56311 - 0.13 12.4 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family CSD PF00313.22 ORF55143 - 6.7e-12 45.1 0.0 9.5e-12 44.6 0.0 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain zf-RanBP PF00641.18 ORF55143 - 0.0003 20.0 1.2 0.00051 19.3 1.2 1.4 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others OB_RNB PF08206.11 ORF55143 - 0.0017 18.0 1.8 0.0017 18.0 1.8 2.4 3 1 0 3 3 3 1 Ribonuclease B OB domain zf-ribbon_3 PF13248.6 ORF55143 - 0.002 17.5 3.0 0.0037 16.6 3.0 1.5 1 0 0 1 1 1 1 zinc-ribbon domain Rubredoxin PF00301.20 ORF55143 - 0.0026 17.8 1.7 0.008 16.2 0.2 2.2 2 0 0 2 2 2 1 Rubredoxin DZR PF12773.7 ORF55143 - 0.023 14.7 0.9 0.04 13.9 0.9 1.3 1 0 0 1 1 1 0 Double zinc ribbon Auto_anti-p27 PF06677.12 ORF55143 - 0.24 11.6 1.5 0.32 11.2 0.7 1.7 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_2 PF13240.6 ORF55143 - 1.3 8.8 7.1 3.1 7.6 4.9 2.5 2 1 0 2 2 2 0 zinc-ribbon domain PRP38_assoc PF12871.7 ORF55143 - 8.8 7.0 31.5 3.4 8.3 22.1 2.3 2 0 0 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term LEA_5 PF00477.17 ORF55025 - 0.041 14.3 0.0 0.06 13.8 0.0 1.2 1 0 0 1 1 1 0 Small hydrophilic plant seed protein Cyt-b5 PF00173.28 ORF54218 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF54218 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Nucleoporin2 PF04096.14 ORF53808 - 1.2e-23 83.8 0.5 1.6e-23 83.5 0.5 1.1 1 0 0 1 1 1 1 Nucleoporin autopeptidase DHHC PF01529.20 ORF52055 - 5.5e-19 68.6 7.5 5.5e-19 68.6 7.5 2.1 2 0 0 2 2 2 2 DHHC palmitoyltransferase C1_2 PF03107.16 ORF52055 - 6.8e-05 23.1 2.9 0.00013 22.2 2.9 1.6 1 0 0 1 1 1 1 C1 domain DUF1272 PF06906.11 ORF52055 - 0.24 11.5 7.1 0.73 10.0 7.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) zinc-ribbons_6 PF07191.12 ORF52055 - 0.47 10.5 7.7 0.7 9.9 7.7 1.2 1 0 0 1 1 1 0 zinc-ribbons AC_N PF16214.5 ORF51537 - 0.55 9.3 3.1 0.68 9.0 3.1 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF3343 PF11823.8 ORF51368 - 0.028 13.9 0.1 0.092 12.2 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) Cyt-b5 PF00173.28 ORF50980 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF50980 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF4811 PF16069.5 ORF50894 - 0.028 14.3 0.4 0.043 13.7 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) DUF3242 PF11586.8 ORF50311 - 0.0015 18.3 0.9 0.0015 18.3 0.9 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3242) Robl_LC7 PF03259.17 ORF50041 - 0.0079 15.9 0.0 0.025 14.3 0.0 1.7 2 0 0 2 2 2 1 Roadblock/LC7 domain Robl_LC7 PF03259.17 ORF50017 - 0.0079 15.9 0.0 0.025 14.3 0.0 1.7 2 0 0 2 2 2 1 Roadblock/LC7 domain Ion_trans PF00520.31 ORF4912 - 0.021 14.1 0.4 0.032 13.4 0.4 1.2 1 0 0 1 1 1 0 Ion transport protein DUF4208 PF13907.6 ORF4912 - 0.081 13.4 2.5 0.45 11.0 2.2 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4208) Cyt-b5 PF00173.28 ORF48869 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF48869 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DrsE PF02635.15 ORF46986 - 9.8e-24 84.0 0.0 1.4e-23 83.4 0.0 1.3 1 0 0 1 1 1 1 DsrE/DsrF-like family Ribosomal_L5 PF00281.19 ORF46986 - 0.12 12.8 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L5 zf-UBR PF02207.20 ORF4525 - 0.26 11.5 4.3 0.89 9.8 2.5 2.2 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Cyt-b5 PF00173.28 ORF43705 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF43705 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF2718 PF10918.8 ORF43235 - 1.9 9.0 7.4 0.27 11.8 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2718) Vps39_2 PF10367.9 ORF43130 - 0.13 12.7 0.2 0.24 11.8 0.2 1.4 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 DUF454 PF04304.13 ORF42900 - 1.3e-40 138.0 16.6 1.3e-40 138.0 16.6 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF454) IgaA PF07095.11 ORF42900 - 0.34 8.9 1.8 0.43 8.5 1.8 1.1 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA Yip1 PF04893.17 ORF39896 - 0.1 12.3 6.2 0.13 12.0 6.2 1.3 1 0 0 1 1 1 0 Yip1 domain AMA-1 PF02430.15 ORF39409 - 0.038 13.0 6.3 0.042 12.8 6.3 1.1 1 0 0 1 1 1 0 Apical membrane antigen 1 Comm PF15957.5 ORF39409 - 1.3 9.4 4.8 10 6.5 0.2 2.4 2 1 0 2 2 2 0 Commissureless ABC_tran PF00005.27 ORF37891 - 3.7e-16 59.9 0.0 5.5e-16 59.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF37891 - 7.4e-07 29.3 0.0 8.9e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF37891 - 0.00029 20.4 0.0 0.00036 20.0 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF37891 - 0.1 12.8 0.1 1.5 9.1 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Hydrolase_3 PF08282.12 ORF37831 - 2.3e-28 99.6 0.0 2.6e-28 99.4 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 ORF37831 - 3.5e-07 30.0 0.0 4.3e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 ORF37831 - 9.9e-05 22.7 0.2 0.00022 21.6 0.2 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF37831 - 0.0036 17.7 0.5 0.065 13.6 0.0 2.4 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase DASH_Dad1 PF08649.10 ORF37831 - 0.0075 16.4 1.3 0.28 11.4 0.0 2.9 3 0 0 3 3 3 1 DASH complex subunit Dad1 HAD_2 PF13419.6 ORF37831 - 0.01 16.0 0.0 0.016 15.3 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Methyltransf_20 PF12147.8 ORF36941 - 7e-71 238.9 0.0 8.2e-71 238.7 0.0 1.0 1 0 0 1 1 1 1 Putative methyltransferase SopA PF13981.6 ORF32928 - 1.3e-20 74.2 0.3 1.3e-20 74.2 0.3 2.1 3 0 0 3 3 3 1 SopA-like central domain DUF692 PF05114.13 ORF32928 - 0.075 12.2 0.1 0.17 11.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF692) Bax1-I PF01027.20 ORF32596 - 0.42 10.4 8.3 0.72 9.7 3.5 2.1 1 1 1 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 US6 PF17616.2 ORF32596 - 1.5 8.7 12.9 3.4 7.6 0.1 3.9 4 0 0 4 4 4 0 Viral unique short region 6 Comm PF15957.5 ORF32596 - 1.7 9.1 5.7 2.6 8.4 0.4 2.3 2 0 0 2 2 2 0 Commissureless DUF3439 PF11921.8 ORF30204 - 0.0043 17.0 2.1 0.0057 16.6 2.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3439) TPPK_C PF12555.8 ORF30204 - 0.013 15.5 0.2 0.042 13.9 0.0 1.8 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal K_trans PF02705.16 ORF30204 - 0.015 13.9 0.1 0.016 13.7 0.1 1.0 1 0 0 1 1 1 0 K+ potassium transporter RskA PF10099.9 ORF30204 - 0.076 13.3 0.1 0.087 13.1 0.1 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA AC_N PF16214.5 ORF29006 - 0.55 9.3 3.1 0.68 9.0 3.1 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region FixO PF02433.15 ORF28737 - 0.051 13.0 3.3 0.07 12.6 3.3 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO Cyt-b5 PF00173.28 ORF28564 - 1.2e-07 31.8 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF28564 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Tuberculin PF12198.8 ORF26637 - 0.093 12.8 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 Theoretical tuberculin protein Ocular_alb PF02101.15 ORF26378 - 0.11 11.3 0.0 4.4 6.1 0.0 2.0 2 0 0 2 2 2 0 Ocular albinism type 1 protein RraA-like PF03737.15 ORF25143 - 3e-36 124.8 0.5 3.4e-36 124.7 0.5 1.0 1 0 0 1 1 1 1 Aldolase/RraA GTP_EFTU_D3 PF03143.17 ORF24679 - 2.7e-14 53.4 0.0 1.1e-13 51.5 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF24679 - 0.086 13.2 0.0 0.21 12.0 0.0 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 2 Clenterotox PF03505.14 ORF24230 - 0.077 12.6 0.1 0.1 12.2 0.1 1.2 1 0 0 1 1 1 0 Clostridium enterotoxin Pyridoxal_deC PF00282.19 ORF23830 - 0.0048 15.7 0.0 0.006 15.4 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain zf-H2C2_5 PF13909.6 ORF23830 - 0.11 12.3 0.2 0.22 11.3 0.2 1.4 1 0 0 1 1 1 0 C2H2-type zinc-finger domain Cyt-b5 PF00173.28 ORF21966 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF21966 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 ADK PF00406.22 ORF20075 - 0.0034 17.5 0.2 0.0034 17.5 0.2 1.5 2 0 0 2 2 2 1 Adenylate kinase Trnau1ap PF17654.1 ORF20075 - 0.21 12.4 4.6 0.2 12.5 3.4 1.6 1 1 0 1 1 1 0 Selenocysteine tRNA 1 associated proteins PspB PF06667.12 ORF20075 - 1.8 8.7 4.4 3.7 7.7 0.1 2.6 2 1 0 2 2 2 0 Phage shock protein B tRNA_lig_CPD PF08302.11 ORF19837 - 0.018 14.5 3.2 0.018 14.5 3.2 1.6 2 0 0 2 2 2 0 Fungal tRNA ligase phosphodiesterase domain Herpes_DNAp_acc PF04929.12 ORF19837 - 1.3 7.9 12.2 1.6 7.6 12.2 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor TFIIB PF00382.19 ORF18682 - 0.08 13.0 1.6 0.11 12.6 0.3 1.9 2 0 0 2 2 2 0 Transcription factor TFIIB repeat Ribosomal_S4e PF00900.20 ORF18682 - 0.11 12.5 0.9 0.17 11.8 0.9 1.3 1 0 0 1 1 1 0 Ribosomal family S4e DHHC PF01529.20 ORF17310 - 1.6e-23 83.3 13.7 1.6e-23 83.3 13.7 2.1 2 0 0 2 2 2 1 DHHC palmitoyltransferase ISK_Channel PF02060.15 ORF17310 - 0.03 14.0 0.0 0.052 13.3 0.0 1.5 1 0 0 1 1 1 0 Slow voltage-gated potassium channel Zf_RING PF16744.5 ORF17310 - 0.066 13.3 5.3 0.11 12.6 5.3 1.3 1 0 0 1 1 1 0 KIAA1045 RING finger PgpA PF04608.13 ORF17310 - 0.077 13.0 0.2 0.12 12.4 0.2 1.5 1 1 0 1 1 1 0 Phosphatidylglycerophosphatase A RRM_1 PF00076.22 ORF16709 - 1.3e-16 60.1 0.1 2.3e-16 59.4 0.1 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) adh_short PF00106.25 ORF16211 - 7.2e-39 133.3 0.1 7.9e-39 133.1 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF16211 - 4.5e-28 98.4 0.0 5.4e-28 98.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF16211 - 2.3e-06 27.6 0.1 3.5e-06 27.0 0.1 1.3 1 1 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF16211 - 0.049 12.8 0.0 0.05 12.7 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein LEA_5 PF00477.17 ORF16211 - 0.12 12.8 0.1 0.18 12.3 0.1 1.2 1 0 0 1 1 1 0 Small hydrophilic plant seed protein Abi_HHR PF07815.14 ORF16192 - 0.01 16.0 0.0 0.016 15.3 0.0 1.4 1 0 0 1 1 1 0 Abl-interactor HHR ATP-synt_C PF00137.21 ORF15658 - 1.3e-22 79.8 24.6 2.1e-12 47.2 12.5 2.2 2 0 0 2 2 2 2 ATP synthase subunit C G0-G1_switch_2 PF15103.6 ORF15658 - 0.039 14.4 0.1 0.12 12.8 0.0 1.9 2 0 0 2 2 2 0 G0/G1 switch protein 2 PIRT PF15099.6 ORF15658 - 0.043 13.4 3.1 2.9 7.5 0.7 2.2 2 0 0 2 2 2 0 Phosphoinositide-interacting protein family Oxidored_q2 PF00420.24 ORF15658 - 0.44 10.2 6.6 0.32 10.6 1.2 2.3 1 1 1 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Cyt-b5 PF00173.28 ORF15591 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF15591 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 HMGL-like PF00682.19 ORF152067 - 6.4e-27 94.8 0.1 7.2e-27 94.6 0.1 1.0 1 0 0 1 1 1 1 HMGL-like Cyt-b5 PF00173.28 ORF150629 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF150629 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF150516 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Zn_Tnp_IS91 PF14319.6 ORF149460 - 6.3 6.9 11.2 3.9 7.6 7.3 2.3 2 1 0 2 2 2 0 Transposase zinc-binding domain Acetyltransf_1 PF00583.25 ORF148446 - 9.7e-17 61.3 0.0 1.2e-16 61.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF148446 - 1.4e-11 44.4 0.0 1.7e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF148446 - 2e-11 44.3 0.0 2.3e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF148446 - 2.1e-10 41.4 0.0 2.6e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF148446 - 4.7e-09 36.6 0.0 6.3e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF148446 - 1.8e-06 27.7 0.0 2.7e-06 27.1 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF148446 - 8.1e-06 25.7 0.0 1.3e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF148446 - 0.01 15.9 0.0 0.047 13.8 0.0 2.1 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain CENP-N PF05238.13 ORF148131 - 0.022 14.1 1.2 0.025 13.9 1.2 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like TPR_19 PF14559.6 ORF148131 - 0.052 14.1 0.6 11 6.6 0.2 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat CrgA PF06781.12 ORF148131 - 0.13 12.3 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Cell division protein CrgA TPR_5 PF12688.7 ORF148131 - 0.13 12.5 0.1 0.29 11.4 0.1 1.7 1 1 0 1 1 1 0 Tetratrico peptide repeat TPR_12 PF13424.6 ORF148131 - 0.13 12.5 0.7 2.6 8.4 0.0 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Connexin PF00029.19 ORF148131 - 0.17 11.7 0.1 0.17 11.6 0.1 1.1 1 0 0 1 1 1 0 Connexin VIR_N PF15912.5 ORF148131 - 0.18 11.3 3.3 0.21 11.2 3.3 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal U79_P34 PF03064.16 ORF148131 - 0.35 10.2 6.2 0.38 10.1 6.2 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Vps39_1 PF10366.9 ORF148131 - 0.37 11.1 2.5 0.63 10.4 0.2 2.2 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 1 Cytomega_UL84 PF06284.11 ORF148131 - 0.8 8.1 4.3 0.92 7.9 4.3 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein UBN_AB PF14075.6 ORF148131 - 1.3 8.7 10.8 0.44 10.2 7.5 1.7 1 1 0 1 1 1 0 Ubinuclein conserved middle domain UQ_con PF00179.26 ORF147625 - 3.5e-48 162.8 0.0 3.9e-48 162.6 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF147625 - 0.15 12.3 1.1 0.29 11.5 0.8 1.8 1 1 1 2 2 2 0 RWD domain Cyt-b5 PF00173.28 ORF147209 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF147209 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF146704 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF146704 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Fez1 PF06818.15 ORF146014 - 0.0014 19.1 2.2 0.0017 18.9 2.2 1.1 1 0 0 1 1 1 1 Fez1 ELMO_CED12 PF04727.13 ORF146014 - 0.023 14.8 0.4 0.044 13.9 0.4 1.4 1 0 0 1 1 1 0 ELMO/CED-12 family Syntaxin-5_N PF11416.8 ORF146014 - 0.11 11.7 0.9 0.2 11.0 0.9 1.4 1 0 0 1 1 1 0 Syntaxin-5 N-terminal, Sly1p-binding domain DUF2593 PF10767.9 ORF145970 - 2.7e-64 215.5 6.5 3.1e-64 215.3 6.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2593) GATase1_like PF07090.11 ORF145606 - 0.14 11.6 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative glutamine amidotransferase Cyt-b5 PF00173.28 ORF144031 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF144031 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 zf-UBR PF02207.20 ORF141814 - 0.24 11.6 4.4 0.89 9.8 2.5 2.2 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) MAM PF00629.23 ORF141706 - 0.083 12.8 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 MAM domain, meprin/A5/mu Cyt-b5 PF00173.28 ORF141596 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF141596 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF3483 PF11982.8 ORF141035 - 0.14 11.8 0.2 0.21 11.2 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3483) Cyt-b5 PF00173.28 ORF140601 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF140601 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 GILT PF03227.16 ORF139369 - 4.4e-07 30.1 7.3 7.1e-07 29.4 7.3 1.4 1 0 0 1 1 1 1 Gamma interferon inducible lysosomal thiol reductase (GILT) zf-UBR PF02207.20 ORF139238 - 0.26 11.5 4.3 0.89 9.8 2.5 2.2 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) zf-UBR PF02207.20 ORF138511 - 0.26 11.5 4.3 0.89 9.8 2.5 2.2 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) Cyt-b5 PF00173.28 ORF138021 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF138021 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF137526 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF137526 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF135853 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF135853 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Ax_dynein_light PF10211.9 ORF134279 - 5.7e-59 199.2 0.3 6.6e-59 199.0 0.3 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain EF-hand_1 PF00036.32 ORF134220 - 1.1e-16 59.0 0.0 0.00059 19.2 0.0 4.5 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF134220 - 3.4e-15 54.6 0.4 0.0012 18.6 0.0 4.8 5 0 0 5 5 5 4 EF-hand domain EF-hand_7 PF13499.6 ORF134220 - 6.2e-15 55.4 0.9 5.7e-07 29.9 0.0 2.6 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF134220 - 1.7e-08 33.6 0.4 0.0027 17.1 0.1 3.5 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF134220 - 3.1e-05 23.7 0.8 1 9.3 0.0 4.4 3 1 2 5 5 5 3 EF-hand domain pair DUF3567 PF12091.8 ORF134220 - 0.0084 16.2 0.1 0.015 15.4 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3567) CDC50 PF03381.15 ORF133977 - 1.1e-11 44.7 0.0 1.4e-11 44.5 0.0 1.0 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Cyt-b5 PF00173.28 ORF13219 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF13219 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 DUF2684 PF10885.8 ORF129474 - 0.12 12.5 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Cyt-b5 PF00173.28 ORF128512 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF128512 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Cyt-b5 PF00173.28 ORF123356 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF123356 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 TSA PF03249.13 ORF123025 - 0.19 10.5 0.7 0.26 10.0 0.7 1.2 1 0 0 1 1 1 0 Type specific antigen 2H-phosphodiest PF08975.10 ORF121700 - 0.063 13.2 0.0 0.076 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1868) Cyt-b5 PF00173.28 ORF121557 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF121557 - 0.23 12.0 0.9 1.2 9.7 0.3 2.2 2 1 0 2 2 2 0 Pet100 Form-deh_trans PF09163.11 ORF121186 - 0.12 12.2 0.2 0.21 11.4 0.2 1.4 1 0 0 1 1 1 0 Formate dehydrogenase N, transmembrane Cyt-b5 PF00173.28 ORF120427 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF120427 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Ocular_alb PF02101.15 ORF119884 - 0.11 11.3 0.0 4.4 6.1 0.0 2.0 2 0 0 2 2 2 0 Ocular albinism type 1 protein Nramp PF01566.18 ORF119853 - 7.9e-30 104.0 0.8 7.9e-30 104.0 0.8 1.9 1 1 1 2 2 2 1 Natural resistance-associated macrophage protein Colicin_V PF02674.16 ORF118290 - 1.4e-35 122.3 14.0 1.7e-35 122.1 14.0 1.0 1 0 0 1 1 1 1 Colicin V production protein AC_N PF16214.5 ORF118290 - 1.4 7.9 6.4 1.9 7.6 6.4 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region FXR_C1 PF16096.5 ORF118264 - 6.1 7.1 10.7 0.064 13.5 3.1 1.6 2 0 0 2 2 2 0 Fragile X-related 1 protein C-terminal region 2 ABC_membrane PF00664.23 ORF11285 - 1.2e-19 71.1 9.2 1.3e-19 70.9 9.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF5566 PF17721.1 ORF11285 - 0.17 12.2 0.1 0.25 11.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5566) Cyt-b5 PF00173.28 ORF112397 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF112397 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 GTP_EFTU_D3 PF03143.17 ORF112154 - 2.7e-14 53.4 0.0 1.1e-13 51.5 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF112154 - 0.086 13.2 0.0 0.21 12.0 0.0 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 2 FA_desaturase PF00487.24 ORF111839 - 0.09 12.6 0.2 0.13 12.1 0.2 1.2 1 0 0 1 1 1 0 Fatty acid desaturase DUF4355 PF14265.6 ORF111428 - 0.43 10.8 16.1 0.83 9.9 15.5 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4355) AAA_23 PF13476.6 ORF111428 - 0.55 10.7 14.2 0.69 10.4 14.2 1.1 1 0 0 1 1 1 0 AAA domain CemA PF03040.14 ORF111428 - 0.84 9.5 4.0 1.1 9.2 4.0 1.3 1 0 0 1 1 1 0 CemA family CID_GANP PF16766.5 ORF111192 - 0.14 12.3 0.2 2.6 8.3 0.0 2.2 2 0 0 2 2 2 0 Binding region of GANP to ENY2 PPR_2 PF13041.6 ORF109941 - 5.6e-13 48.9 0.0 5.3e-05 23.3 0.0 2.5 2 0 0 2 2 2 2 PPR repeat family PPR PF01535.20 ORF109941 - 3.3e-11 42.7 0.1 0.00026 21.0 0.0 3.9 4 0 0 4 4 4 3 PPR repeat PPR_1 PF12854.7 ORF109941 - 4.5e-06 26.3 0.0 0.61 9.8 0.0 3.6 3 0 0 3 3 3 3 PPR repeat PPR_3 PF13812.6 ORF109941 - 2e-05 24.6 0.0 0.044 13.9 0.0 2.5 2 1 0 2 2 2 2 Pentatricopeptide repeat domain Symplekin_C PF12295.8 ORF109941 - 0.074 13.1 0.4 0.11 12.6 0.4 1.2 1 0 0 1 1 1 0 Symplekin tight junction protein C terminal TPR_7 PF13176.6 ORF109941 - 0.1 12.6 0.0 0.66 10.1 0.0 2.4 4 0 0 4 4 4 0 Tetratricopeptide repeat COX5A PF02284.16 ORF109941 - 0.19 11.8 0.0 4.8 7.3 0.0 2.1 1 1 1 2 2 2 0 Cytochrome c oxidase subunit Va MutS_V PF00488.21 ORF109592 - 3.4e-41 141.4 0.1 4.1e-41 141.1 0.1 1.1 1 0 0 1 1 1 1 MutS domain V YscK PF06578.12 ORF109592 - 0.075 12.5 0.0 0.1 12.1 0.0 1.3 1 1 0 1 1 1 0 YOP proteins translocation protein K (YscK) MT PF12777.7 ORF105399 - 4.9e-12 45.5 0.0 5.9e-12 45.3 0.0 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Cyt-b5 PF00173.28 ORF104887 - 1.2e-07 31.7 0.3 1.6e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pet100 PF09803.9 ORF104887 - 0.11 13.1 1.0 0.56 10.8 0.3 2.2 2 1 0 2 2 2 0 Pet100 Orf78 PF06024.12 ORF104280 - 0.039 14.3 6.1 0.06 13.7 6.1 1.2 1 0 0 1 1 1 0 Orf78 (ac78) DUF5401 PF17380.2 ORF104280 - 0.058 11.5 0.6 0.068 11.2 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) ABC_ATPase PF09818.9 ORF103496 - 0.34 9.7 7.2 1 8.1 7.3 1.5 1 1 0 1 1 1 0 Predicted ATPase of the ABC class ORF6N PF10543.9 ORF103496 - 8.9 6.6 10.2 77 3.6 10.1 2.6 1 1 0 1 1 1 0 ORF6N domain AC_N PF16214.5 ORF102351 - 0.55 9.3 3.1 0.68 9.0 3.1 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region AC_N PF16214.5 ORF102266 - 0.55 9.3 3.1 0.68 9.0 3.1 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Ank_4 PF13637.6 ORF100743 - 0.00089 19.8 0.1 0.023 15.3 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF100743 - 0.0096 16.5 0.3 0.017 15.7 0.3 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) ArfGap PF01412.18 ORF100743 - 0.011 15.8 2.2 0.011 15.8 2.2 1.9 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf Ank_3 PF13606.6 ORF100743 - 0.14 12.8 0.4 2.6 8.9 0.0 2.6 2 0 0 2 2 2 0 Ankyrin repeat DUF262 PF03235.14 ORF100743 - 0.61 10.2 8.6 0.79 9.9 8.6 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF262 RNA_pol PF00940.19 NODE_42263_length_481_cov_1.995516_g34659_i0reverse_frame_1 - 0.17 10.7 0.2 0.21 10.4 0.2 1.1 1 0 0 1 1 1 0 DNA-dependent RNA polymerase ALS2CR11 PF15729.5 NODE_42262_length_481_cov_2.161435_g34658_i0reverse_frame_1 - 0.15 11.2 0.4 0.18 10.9 0.4 1.1 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 candidate 11 Mannitol_dh PF01232.23 NODE_42255_length_481_cov_2.665919_g34651_i0forward_frame_1 - 2.8e-07 30.8 0.2 3.9e-07 30.3 0.2 1.2 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain Alpha_E1_glycop PF01589.16 NODE_42249_length_481_cov_8.645740_g34645_i0forward_frame_1 - 0.15 10.7 1.0 0.19 10.4 1.0 1.1 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein Vut_1 PF02592.15 NODE_42241_length_481_cov_61.078475_g34637_i0reverse_frame_1 - 1.4e-18 67.7 14.8 2.2e-18 67.0 14.8 1.4 1 1 0 1 1 1 1 Putative vitamin uptake transporter VirE1 PF12189.8 NODE_42206_length_481_cov_852.255605_g34603_i0reverse_frame_1 - 0.19 11.9 0.6 0.54 10.4 0.1 2.0 2 0 0 2 2 2 0 Single-strand DNA-binding protein FAM70 PF14967.6 NODE_42206_length_481_cov_852.255605_g34603_i0reverse_frame_1 - 0.41 10.1 4.5 0.5 9.8 4.5 1.1 1 0 0 1 1 1 0 FAM70 protein Asp PF00026.23 NODE_42206_length_481_cov_852.255605_g34603_i0forward_frame_1 - 1.2e-07 31.5 0.0 1.3e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF4751 PF15942.5 NODE_42206_length_481_cov_852.255605_g34603_i0forward_frame_1 - 0.046 13.7 0.5 0.21 11.6 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4751) HTH_10 PF04967.12 NODE_42198_length_482_cov_1.456376_g34598_i0forward_frame_1 - 0.15 11.8 0.1 2.6 7.9 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain Transposase_20 PF02371.16 NODE_42198_length_482_cov_1.456376_g34598_i0forward_frame_1 - 0.34 11.2 4.7 0.23 11.8 1.4 2.1 1 1 1 2 2 2 0 Transposase IS116/IS110/IS902 family MFS_1 PF07690.16 NODE_42195_length_482_cov_2.040268_g34595_i0forward_frame_1 - 4.7e-13 48.8 9.1 5.2e-13 48.7 9.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_3 PF05977.13 NODE_42195_length_482_cov_2.040268_g34595_i0forward_frame_1 - 0.0022 16.5 0.7 0.0027 16.2 0.7 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector COX7a PF02238.15 NODE_42195_length_482_cov_2.040268_g34595_i0forward_frame_1 - 0.11 12.9 1.0 0.11 12.9 1.0 2.4 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VII PINIT PF14324.6 NODE_42191_length_482_cov_2.861298_g34591_i0reverse_frame_1 - 0.01 16.2 0.4 0.013 15.8 0.4 1.2 1 0 0 1 1 1 0 PINIT domain Ank_5 PF13857.6 NODE_42176_length_482_cov_89.854586_g34576_i0reverse_frame_1 - 5e-08 33.1 0.3 7.4e-06 26.1 0.3 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_42176_length_482_cov_89.854586_g34576_i0reverse_frame_1 - 0.00086 19.9 0.0 0.0021 18.6 0.0 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_42176_length_482_cov_89.854586_g34576_i0reverse_frame_1 - 0.00091 19.7 0.0 0.0026 18.3 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_42176_length_482_cov_89.854586_g34576_i0reverse_frame_1 - 0.0068 16.8 0.0 0.021 15.3 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 NODE_42176_length_482_cov_89.854586_g34576_i0reverse_frame_1 - 0.15 12.5 0.0 0.95 10.0 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat DUF2423 PF10338.9 NODE_42174_length_482_cov_94.601790_g34574_i0reverse_frame_1 - 0.014 15.6 0.3 0.042 14.1 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2423) EF-hand_5 PF13202.6 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 1.7e-12 46.2 0.4 7.5e-06 25.2 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 9e-12 43.7 0.1 6.5e-05 22.2 0.1 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 4e-11 43.2 0.0 7e-11 42.4 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 2.1e-09 36.5 0.0 0.00038 20.2 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 5.1e-06 26.2 0.2 0.0069 16.2 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 0.026 14.9 0.0 0.22 11.9 0.0 1.8 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Fer4_24 PF18109.1 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_1 - 0.031 14.5 0.2 0.064 13.5 0.2 1.5 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain Apocytochr_F_C PF01333.19 NODE_42157_length_482_cov_3216.644295_g34558_i0reverse_frame_1 - 1.9e-35 121.5 0.1 2.3e-35 121.2 0.1 1.1 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF5006 PF16397.5 NODE_42157_length_482_cov_3216.644295_g34558_i0reverse_frame_1 - 0.00026 20.3 0.1 0.00033 19.9 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5006) RnfC_N PF13375.6 NODE_42157_length_482_cov_3216.644295_g34558_i0reverse_frame_1 - 0.058 13.4 0.3 2.4 8.1 0.1 2.2 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain FlhE PF06366.13 NODE_42125_length_483_cov_88.544643_g34526_i0forward_frame_1 - 0.11 12.6 0.1 0.21 11.6 0.1 1.6 1 0 0 1 1 1 0 Flagellar protein FlhE MORN PF02493.20 NODE_42121_length_483_cov_98.578125_g34523_i0forward_frame_1 - 1.3e-09 37.4 29.6 0.0015 18.3 0.6 5.6 6 0 0 6 6 6 4 MORN repeat DUF4427 PF14468.6 NODE_42120_length_483_cov_102.832589_g34522_i0reverse_frame_1 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4427) DUF998 PF06197.13 NODE_42120_length_483_cov_102.832589_g34522_i0reverse_frame_1 - 0.34 10.5 5.7 1.1 8.8 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF998) YIF1 PF03878.15 NODE_42115_length_483_cov_133.189732_g34517_i0forward_frame_1 - 9.3e-17 61.3 5.4 1.1e-16 61.1 5.4 1.0 1 0 0 1 1 1 1 YIF1 Yip1 PF04893.17 NODE_42115_length_483_cov_133.189732_g34517_i0forward_frame_1 - 0.00046 20.0 9.5 0.00046 20.0 9.5 1.6 1 1 1 2 2 2 1 Yip1 domain DUF2593 PF10767.9 NODE_42104_length_483_cov_183.765625_g34506_i0reverse_frame_1 - 0.025 14.6 0.7 0.025 14.6 0.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2593) DUF1754 PF08555.10 NODE_42084_length_483_cov_1175.515625_g34486_i0forward_frame_1 - 0.024 15.4 5.3 0.045 14.5 5.3 1.3 1 0 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) PIG-P PF08510.12 NODE_42075_length_484_cov_2.300668_g34479_i0forward_frame_2 - 0.013 15.5 1.7 0.013 15.5 1.7 1.6 1 1 1 2 2 2 0 PIG-P Glyco_transf_8C PF08437.10 NODE_42073_length_484_cov_2.532294_g34477_i0reverse_frame_3 - 1.7e-18 66.5 4.7 3e-18 65.7 4.7 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 8 C-terminal Glyco_transf_8 PF01501.20 NODE_42073_length_484_cov_2.532294_g34477_i0reverse_frame_3 - 8e-06 25.6 0.3 8e-06 25.6 0.3 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 8 Glycos_transf_2 PF00535.26 NODE_42073_length_484_cov_2.532294_g34477_i0reverse_frame_3 - 5.9e-05 22.9 0.4 0.00014 21.7 0.1 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 NODE_42073_length_484_cov_2.532294_g34477_i0reverse_frame_3 - 0.16 11.8 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF2550 PF10739.9 NODE_42073_length_484_cov_2.532294_g34477_i0forward_frame_2 - 0.066 13.2 0.1 0.2 11.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2550) UQ_con PF00179.26 NODE_42072_length_484_cov_2.543430_g34476_i0reverse_frame_2 - 5.8e-08 32.5 0.5 9.2e-08 31.8 0.5 1.5 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme KNOX1 PF03790.13 NODE_42072_length_484_cov_2.543430_g34476_i0forward_frame_3 - 0.071 12.9 3.7 0.58 9.9 0.6 2.6 3 0 0 3 3 3 0 KNOX1 domain MH1 PF03165.16 NODE_42062_length_484_cov_4.258352_g34466_i0forward_frame_2 - 0.068 13.4 4.4 1.2 9.4 0.8 2.4 1 1 1 2 2 2 0 MH1 domain Yos9_DD PF17880.1 NODE_42054_length_484_cov_73.654788_g34458_i0forward_frame_3 - 0.0067 16.6 0.1 0.01 16.0 0.1 1.2 1 0 0 1 1 1 1 Yos9 dimerzation domain CH_2 PF06294.11 NODE_42054_length_484_cov_73.654788_g34458_i0forward_frame_2 - 0.047 13.8 0.0 0.098 12.8 0.0 1.6 1 1 0 1 1 1 0 CH-like domain in sperm protein Cwf_Cwc_15 PF04889.12 NODE_42044_length_484_cov_117.572383_g34448_i0reverse_frame_3 - 0.0081 15.9 3.0 0.0081 15.9 3.0 1.5 1 1 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein PRKG1_interact PF15898.5 NODE_42044_length_484_cov_117.572383_g34448_i0reverse_frame_3 - 0.017 16.0 4.5 0.017 16.0 4.5 1.8 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain Spc7 PF08317.11 NODE_42044_length_484_cov_117.572383_g34448_i0reverse_frame_3 - 0.069 12.0 8.4 0.08 11.8 8.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein HAUS-augmin3 PF14932.6 NODE_42044_length_484_cov_117.572383_g34448_i0reverse_frame_3 - 0.12 11.9 8.4 0.16 11.5 8.4 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 DUF4140 PF13600.6 NODE_42044_length_484_cov_117.572383_g34448_i0reverse_frame_3 - 1.9 9.0 9.0 0.8 10.2 3.5 2.6 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) U-box PF04564.15 NODE_42041_length_484_cov_146.334076_g34445_i0reverse_frame_3 - 5.1e-15 55.4 0.0 1.1e-14 54.3 0.0 1.5 1 0 0 1 1 1 1 U-box domain UCR_14kD PF02271.16 NODE_42041_length_484_cov_146.334076_g34445_i0reverse_frame_3 - 0.0039 17.1 0.0 0.0067 16.4 0.0 1.4 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit zf-NOSIP PF15906.5 NODE_42041_length_484_cov_146.334076_g34445_i0reverse_frame_3 - 0.12 12.5 0.0 0.32 11.1 0.0 1.7 2 0 0 2 2 2 0 Zinc-finger of nitric oxide synthase-interacting protein DUF761 PF05553.11 NODE_42037_length_484_cov_210.959911_g34441_i0reverse_frame_2 - 0.35 10.4 3.9 0.54 9.9 3.9 1.2 1 0 0 1 1 1 0 Cotton fibre expressed protein tRNA_lig_CPD PF08302.11 NODE_42033_length_484_cov_238.601336_g34437_i0forward_frame_3 - 0.0013 18.2 0.3 0.0019 17.7 0.0 1.4 2 0 0 2 2 2 1 Fungal tRNA ligase phosphodiesterase domain PDZ PF00595.24 NODE_42030_length_484_cov_387.024499_g34434_i0reverse_frame_3 - 0.0053 17.1 0.0 0.013 15.8 0.0 1.7 1 1 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 NODE_42030_length_484_cov_387.024499_g34434_i0reverse_frame_3 - 0.0079 16.5 0.1 0.018 15.4 0.1 1.6 1 1 0 1 1 1 1 PDZ domain DUF5341 PF17276.2 NODE_42030_length_484_cov_387.024499_g34434_i0reverse_frame_2 - 0.048 13.8 1.4 0.075 13.2 1.4 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5341) PHD_Oberon PF07227.11 NODE_42028_length_484_cov_502.685969_g34432_i0reverse_frame_2 - 0.89 9.4 10.7 0.14 12.1 6.6 1.7 1 1 1 2 2 2 0 PHD - plant homeodomain finger protein MMR1 PF08505.10 NODE_42027_length_484_cov_788.982183_g34431_i0reverse_frame_2 - 7.6 6.7 29.5 10 6.3 29.5 1.2 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein SBDS_C PF09377.10 NODE_42017_length_485_cov_2.155556_g34423_i0reverse_frame_2 - 0.037 14.0 0.5 0.045 13.8 0.5 1.3 1 1 0 1 1 1 0 SBDS protein C-terminal domain CHDCT2 PF08074.11 NODE_42017_length_485_cov_2.155556_g34423_i0reverse_frame_2 - 0.042 14.0 1.1 0.15 12.2 0.2 1.9 2 0 0 2 2 2 0 CHDCT2 (NUC038) domain DUF4200 PF13863.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 6.3e-16 58.9 23.1 6.3e-16 58.9 23.1 1.5 2 0 0 2 2 1 1 Domain of unknown function (DUF4200) V_ATPase_I PF01496.19 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.014 13.4 6.7 0.014 13.4 6.7 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4094 PF13334.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.085 13.3 4.7 0.16 12.4 4.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) Uds1 PF15456.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.1 12.7 8.5 0.2 11.8 8.5 1.5 1 0 0 1 1 1 0 Up-regulated During Septation DUF724 PF05266.14 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.11 12.3 12.7 0.18 11.6 12.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF3287 PF11690.8 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.13 12.0 2.0 0.22 11.2 2.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) FapA PF03961.13 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.16 10.5 10.7 0.16 10.5 10.7 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4407 PF14362.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.17 11.2 2.4 0.17 11.2 2.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Cob_adeno_trans PF01923.18 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.18 11.9 4.0 0.28 11.3 4.0 1.3 1 0 0 1 1 1 0 Cobalamin adenosyltransferase PET10 PF17316.2 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.18 11.3 5.6 0.22 11.0 5.6 1.1 1 0 0 1 1 1 0 Petite colonies protein 10 DUF4140 PF13600.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.25 11.8 3.8 0.42 11.1 3.8 1.5 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) ADIP PF11559.8 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.45 10.6 18.8 0.3 11.2 14.9 2.4 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding HAUS6_N PF14661.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.57 9.7 13.8 0.87 9.1 13.8 1.6 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus WDCP PF15390.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.68 8.3 7.3 0.77 8.1 7.3 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Ly49 PF08391.10 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.77 10.1 12.9 1.6 9.1 12.1 2.0 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region DUF1664 PF07889.12 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.99 9.5 6.6 1.1 9.4 4.9 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4337 PF14235.6 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 0.99 9.5 6.1 1.5 8.9 6.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DivIVA PF05103.13 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 1.1 9.4 15.8 0.98 9.5 6.2 3.0 2 1 1 3 3 3 0 DivIVA protein CorA PF01544.18 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 1.5 8.1 6.4 2.5 7.3 6.4 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF3450 PF11932.8 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 2.9 7.1 11.3 4.7 6.4 11.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TMPIT PF07851.13 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 3.1 7.0 11.1 3.5 6.8 11.1 1.2 1 0 0 1 1 1 0 TMPIT-like protein Fzo_mitofusin PF04799.13 NODE_42007_length_485_cov_4.828889_g34414_i0reverse_frame_3 - 5 6.7 9.9 3.4 7.2 7.4 1.9 1 1 1 2 2 2 0 fzo-like conserved region Topo_Zn_Ribbon PF08272.11 NODE_41999_length_485_cov_77.131111_g34406_i0reverse_frame_2 - 0.018 14.7 0.1 0.04 13.6 0.1 1.6 1 0 0 1 1 1 0 Topoisomerase I zinc-ribbon-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks155.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks155.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks155.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks155.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DHHC PF01529.20 NODE_41991_length_485_cov_96.191111_g34398_i0reverse_frame_3 - 7.7e-25 87.6 0.4 9.6e-25 87.2 0.4 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase 7tm_6 PF02949.20 NODE_41991_length_485_cov_96.191111_g34398_i0reverse_frame_3 - 0.0014 17.8 0.2 0.0018 17.4 0.2 1.1 1 0 0 1 1 1 1 7tm Odorant receptor HemY_N PF07219.13 NODE_41991_length_485_cov_96.191111_g34398_i0reverse_frame_3 - 0.045 13.9 1.1 0.17 12.1 0.0 2.0 2 0 0 2 2 2 0 HemY protein N-terminus Ac76 PF05814.11 NODE_41990_length_485_cov_100.762222_g34397_i0reverse_frame_2 - 0.085 12.9 0.6 0.12 12.4 0.6 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) Methyltransf_23 PF13489.6 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 3.8e-11 43.1 0.0 6.4e-11 42.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 1e-10 42.2 0.0 1.6e-10 41.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 9.6e-10 38.4 0.0 3e-09 36.8 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 1.2e-09 38.8 0.0 5.3e-09 36.7 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 4e-08 33.8 0.0 7.7e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.006 16.0 0.0 0.018 14.5 0.0 1.7 1 1 1 2 2 2 1 Tellurite resistance protein TehB MTS PF05175.14 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.022 14.3 0.0 0.034 13.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_32 PF13679.6 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.025 14.6 0.0 0.038 14.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.18 11.2 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.2 10.9 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase EVC2_like PF12297.8 NODE_41985_length_485_cov_171.748889_g34392_i0reverse_frame_3 - 0.27 9.9 0.1 0.36 9.5 0.1 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Nodulin_late PF07127.11 NODE_41982_length_485_cov_242.031111_g34389_i0reverse_frame_2 - 2.5 8.5 12.4 4.2 7.8 12.4 1.3 1 0 0 1 1 1 0 Late nodulin protein LSR PF05624.14 NODE_41981_length_485_cov_284.662222_g34388_i0reverse_frame_2 - 0.037 14.0 2.7 0.1 12.6 2.7 1.8 1 0 0 1 1 1 0 Lipolysis stimulated receptor (LSR) DegQ PF08181.11 NODE_41981_length_485_cov_284.662222_g34388_i0forward_frame_3 - 0.1 12.7 1.0 0.17 12.0 0.1 1.9 2 0 0 2 2 2 0 DegQ (SacQ) family Erf4 PF10256.9 NODE_41981_length_485_cov_284.662222_g34388_i0forward_frame_2 - 2.8e-05 24.2 0.0 3.8e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family DUF2225 PF09986.9 NODE_41981_length_485_cov_284.662222_g34388_i0forward_frame_2 - 0.021 14.5 2.2 0.066 12.9 0.2 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) Cyt_bd_oxida_I PF01654.17 NODE_41981_length_485_cov_284.662222_g34388_i0forward_frame_2 - 0.15 10.7 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit I Lactamase_B_3 PF13483.6 NODE_41977_length_485_cov_620.737778_g34384_i0reverse_frame_3 - 2.5e-10 40.5 0.0 3.1e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 NODE_41977_length_485_cov_620.737778_g34384_i0reverse_frame_3 - 2.8e-10 40.1 0.0 3.5e-10 39.7 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DUF1576 PF07613.11 NODE_41976_length_485_cov_664.940000_g34383_i0reverse_frame_3 - 1.6 8.3 9.6 4 6.9 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1576) zf-C2H2_jaz PF12171.8 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.00075 19.7 2.6 0.0014 18.8 2.6 1.4 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.0018 18.6 2.0 0.0018 18.6 2.0 1.7 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.0078 16.5 0.2 0.01 16.1 0.2 1.1 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.056 14.3 3.3 0.11 13.4 3.3 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger DUF629 PF04780.12 NODE_41963_length_486_cov_2.192905_g34374_i0reverse_frame_3 - 0.093 11.2 1.1 0.12 10.9 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF629) PKS_DE PF18369.1 NODE_41963_length_486_cov_2.192905_g34374_i0forward_frame_2 - 0.041 14.4 0.4 0.1 13.1 0.4 1.8 1 0 0 1 1 1 0 Polyketide synthase dimerisation element domain DbpA PF03880.15 NODE_41958_length_486_cov_3.161863_g34369_i0reverse_frame_3 - 0.013 15.5 0.0 0.021 14.8 0.0 1.4 1 0 0 1 1 1 0 DbpA RNA binding domain SLATT_5 PF18160.1 NODE_41955_length_486_cov_3.560976_g34366_i0forward_frame_2 - 3.1 7.1 10.3 0.56 9.5 6.5 1.6 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 Fib_alpha PF08702.10 ORF99050 - 0.13 12.4 0.5 0.2 11.8 0.5 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family NusG_II PF07009.11 ORF99033 - 0.16 12.2 0.1 0.3 11.3 0.0 1.5 2 0 0 2 2 2 0 NusG domain II CEBP_ZZ PF16366.5 ORF98749 - 0.00012 22.2 3.4 0.00022 21.4 3.4 1.4 1 0 0 1 1 1 1 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-B_box PF00643.24 ORF98749 - 0.00041 20.5 7.6 0.00061 19.9 7.6 1.2 1 0 0 1 1 1 1 B-box zinc finger zf-C3HC4_3 PF13920.6 ORF98749 - 0.19 11.6 6.3 0.28 11.1 6.3 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) GAS PF13851.6 ORF94780 - 0.00033 20.1 24.1 0.00033 20.1 24.1 1.4 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF94780 - 0.00075 17.2 19.1 0.00082 17.0 19.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Fib_alpha PF08702.10 ORF94780 - 0.0057 16.8 16.2 0.0057 16.8 16.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family Pilus_CpaD PF09476.10 ORF94780 - 0.028 14.1 0.0 0.069 12.9 0.0 1.5 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) Spc7 PF08317.11 ORF94780 - 0.03 13.2 21.0 0.038 12.9 21.0 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein SlyX PF04102.12 ORF94780 - 0.048 14.3 13.9 0.29 11.8 3.1 2.5 1 1 1 2 2 2 0 SlyX DUF948 PF06103.11 ORF94780 - 0.1 12.9 1.5 0.19 12.0 1.3 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Atg14 PF10186.9 ORF94780 - 0.11 11.5 20.9 0.16 11.0 20.9 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3450 PF11932.8 ORF94780 - 0.15 11.3 19.1 0.038 13.3 16.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF1664 PF07889.12 ORF94780 - 0.2 11.7 13.9 0.29 11.2 9.8 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Tnp_22_trimer PF17489.2 ORF94780 - 0.34 10.9 9.0 3.2 7.8 0.8 2.8 2 1 0 2 2 2 0 L1 transposable element trimerization domain Muted PF14942.6 ORF94780 - 0.37 11.1 25.3 0.12 12.7 21.9 1.8 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein UPF0242 PF06785.11 ORF94780 - 0.41 10.7 29.9 0.67 10.0 29.9 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HemX PF04375.14 ORF94780 - 0.5 9.6 15.5 0.15 11.4 12.6 1.6 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase AAA_13 PF13166.6 ORF94780 - 0.5 8.9 24.2 0.024 13.3 14.5 1.8 1 1 0 1 1 1 0 AAA domain Cep57_MT_bd PF06657.13 ORF94780 - 0.84 10.1 20.1 0.16 12.4 6.7 3.2 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF4407 PF14362.6 ORF94780 - 1 8.6 14.8 1.1 8.5 14.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Laminin_II PF06009.12 ORF94780 - 1.4 8.9 17.4 1.8 8.6 12.3 2.1 1 1 1 2 2 2 0 Laminin Domain II IFT57 PF10498.9 ORF94780 - 1.5 7.7 23.9 0.21 10.5 19.3 1.7 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Nup88 PF10168.9 ORF94780 - 1.7 6.4 17.2 1.8 6.3 17.2 1.2 1 0 0 1 1 1 0 Nuclear pore component Exonuc_VII_L PF02601.15 ORF94780 - 2 7.9 16.0 2.1 7.8 16.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Malate_DH PF12434.8 ORF94780 - 5 7.2 6.9 31 4.7 0.7 3.2 2 1 1 3 3 3 0 Malate dehydrogenase enzyme Prefoldin_2 PF01920.20 ORF94780 - 5.2 7.1 29.1 0.5 10.3 8.3 3.5 1 1 2 3 3 3 0 Prefoldin subunit Prefoldin PF02996.17 ORF94780 - 6.4 6.7 21.1 0.23 11.4 5.8 3.4 1 1 3 4 4 4 0 Prefoldin subunit Swi5 PF07061.11 ORF94780 - 6.9 6.8 21.2 1.5 9.0 5.3 3.1 2 1 1 3 3 3 0 Swi5 V_ATPase_I PF01496.19 ORF94780 - 6.9 4.5 17.2 7.4 4.3 17.2 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Tweety PF04906.13 ORF94780 - 9.7 4.7 9.1 7.8 5.0 2.3 2.0 1 1 0 2 2 2 0 Tweety Isochorismatase PF00857.20 ORF93485 - 3.3e-29 102.3 0.2 4.1e-29 102.0 0.2 1.1 1 0 0 1 1 1 1 Isochorismatase family Mer2 PF09074.10 ORF91293 - 0.043 13.6 13.1 0.063 13.1 13.1 1.2 1 0 0 1 1 1 0 Mer2 Mating_N PF12731.7 ORF91293 - 0.049 13.7 0.0 0.11 12.6 0.0 1.6 1 0 0 1 1 1 0 Mating-type protein beta 1 PAP_central PF04928.17 ORF91293 - 0.26 10.2 5.5 0.34 9.9 5.5 1.1 1 0 0 1 1 1 0 Poly(A) polymerase central domain CHD5 PF04420.14 ORF91293 - 2.6 7.9 11.6 0.55 10.1 2.3 2.1 1 1 1 2 2 2 0 CHD5-like protein AIG1 PF04548.16 ORF91293 - 3.7 6.8 13.4 3.8 6.8 2.1 2.1 1 1 1 2 2 2 0 AIG1 family tRNA_lig_CPD PF08302.11 ORF90279 - 0.18 11.2 6.6 0.18 11.2 5.6 1.4 1 1 0 1 1 1 0 Fungal tRNA ligase phosphodiesterase domain DUF445 PF04286.12 ORF89378 - 0.16 11.8 0.0 0.18 11.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF445) GAS PF13851.6 ORF88154 - 0.00033 20.1 24.1 0.00033 20.1 24.1 1.4 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF88154 - 0.0012 16.5 20.0 0.0013 16.4 20.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Fib_alpha PF08702.10 ORF88154 - 0.0057 16.8 16.2 0.0057 16.8 16.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family SlyX PF04102.12 ORF88154 - 0.046 14.4 13.9 0.29 11.8 3.1 2.6 1 1 1 2 2 2 0 SlyX DUF948 PF06103.11 ORF88154 - 0.1 12.9 1.5 0.19 12.0 1.3 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 ORF88154 - 0.12 11.6 18.9 0.043 13.1 16.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Atg14 PF10186.9 ORF88154 - 0.17 11.0 21.5 0.23 10.5 21.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF88154 - 0.18 10.7 23.6 0.21 10.4 23.1 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF88154 - 0.19 11.8 14.0 0.33 11.0 10.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Tnp_22_trimer PF17489.2 ORF88154 - 0.34 10.9 9.0 3.2 7.8 0.8 2.8 2 1 0 2 2 2 0 L1 transposable element trimerization domain UPF0242 PF06785.11 ORF88154 - 0.42 10.7 29.7 0.78 9.8 29.7 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Muted PF14942.6 ORF88154 - 0.47 10.8 25.8 0.14 12.5 22.0 1.9 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein AAA_13 PF13166.6 ORF88154 - 0.47 9.0 24.1 0.014 14.1 13.5 1.8 1 1 0 1 1 1 0 AAA domain HemX PF04375.14 ORF88154 - 0.72 9.1 16.3 0.12 11.7 12.3 1.7 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Cep57_MT_bd PF06657.13 ORF88154 - 0.77 10.3 20.1 0.16 12.4 6.7 3.3 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF4407 PF14362.6 ORF88154 - 1.3 8.4 15.1 1.4 8.2 15.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) IFT57 PF10498.9 ORF88154 - 1.6 7.6 24.1 0.21 10.5 19.3 1.7 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Nup88 PF10168.9 ORF88154 - 1.6 6.5 17.1 1.7 6.4 17.1 1.2 1 0 0 1 1 1 0 Nuclear pore component Laminin_II PF06009.12 ORF88154 - 1.7 8.7 17.4 1.7 8.6 12.2 2.1 1 1 1 2 2 2 0 Laminin Domain II Exonuc_VII_L PF02601.15 ORF88154 - 1.9 8.0 15.9 2 7.9 15.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_2 PF01920.20 ORF88154 - 4 7.4 28.6 0.48 10.4 8.3 3.4 1 1 1 2 2 2 0 Prefoldin subunit Malate_DH PF12434.8 ORF88154 - 4.9 7.3 6.9 31 4.7 0.7 3.2 2 1 1 3 3 3 0 Malate dehydrogenase enzyme Prefoldin PF02996.17 ORF88154 - 5.5 6.9 20.9 0.23 11.4 5.8 3.4 1 1 3 4 4 4 0 Prefoldin subunit Swi5 PF07061.11 ORF88154 - 6.5 6.9 21.2 1.5 9.0 5.3 3.1 2 1 1 3 3 3 0 Swi5 Tweety PF04906.13 ORF88154 - 8.3 5.0 8.9 6.8 5.2 2.3 2.0 1 1 1 2 2 2 0 Tweety Phage_GPO PF05929.11 ORF88154 - 8.3 5.9 15.2 17 4.9 15.2 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase V_ATPase_I PF01496.19 ORF88154 - 8.4 4.2 17.5 9.1 4.0 17.5 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MctB PF11382.8 ORF88154 - 10 5.8 11.2 1.6 8.4 4.0 2.1 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB DUF2079 PF09852.9 ORF87314 - 0.01 14.7 3.9 0.01 14.7 3.9 1.8 2 0 0 2 2 2 0 Predicted membrane protein (DUF2079) Sod_Cu PF00080.20 ORF85662 - 3.7e-44 150.3 6.1 4.3e-44 150.1 6.1 1.0 1 0 0 1 1 1 1 Copper/zinc superoxide dismutase (SODC) MFS_1 PF07690.16 ORF83564 - 8.2e-06 25.0 1.0 1.1e-05 24.5 1.0 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF83564 - 0.026 13.1 6.6 0.012 14.2 2.7 1.9 2 0 0 2 2 2 0 MFS/sugar transport protein SPC25 PF06703.11 ORF83564 - 0.76 9.5 4.5 14 5.5 1.8 2.4 3 0 0 3 3 3 0 Microsomal signal peptidase 25 kDa subunit (SPC25) FYVE PF01363.21 ORF83221 - 0.0038 17.3 12.9 0.034 14.3 13.0 2.1 1 1 1 2 2 2 1 FYVE zinc finger Prok-RING_4 PF14447.6 ORF83221 - 0.0054 16.6 6.7 0.019 14.8 6.7 2.0 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF83221 - 0.01 16.1 11.9 0.13 12.6 12.8 2.1 1 1 1 2 2 2 0 Ring finger domain zf-RING_UBOX PF13445.6 ORF83221 - 0.011 15.7 4.3 0.011 15.7 4.3 2.0 2 1 0 2 2 2 0 RING-type zinc-finger IBR PF01485.21 ORF83221 - 0.011 15.9 5.6 0.011 15.9 5.6 2.2 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain Endonuclease_7 PF02945.15 ORF83221 - 0.014 15.3 1.3 0.021 14.7 1.3 1.4 1 0 0 1 1 1 0 Recombination endonuclease VII zf-RING_5 PF14634.6 ORF83221 - 0.017 15.1 11.3 0.037 14.0 11.3 1.6 1 1 0 1 1 1 0 zinc-RING finger domain Prok-RING_1 PF14446.6 ORF83221 - 0.072 13.0 11.2 0.72 9.8 6.9 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 FYVE_2 PF02318.16 ORF83221 - 0.086 13.1 9.4 0.076 13.2 8.5 1.5 1 1 0 1 1 1 0 FYVE-type zinc finger zf-RING_4 PF14570.6 ORF83221 - 0.17 11.7 12.2 0.066 13.0 8.2 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain C1_1 PF00130.22 ORF83221 - 0.21 11.5 9.2 0.26 11.2 6.8 2.1 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF1272 PF06906.11 ORF83221 - 0.29 11.2 8.4 0.18 11.9 5.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) DUF2180 PF09947.9 ORF83221 - 0.44 10.6 7.9 1.8 8.6 7.5 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2180) C5HCH PF17982.1 ORF83221 - 1.1 9.5 10.8 0.88 9.8 9.0 1.9 1 1 0 1 1 1 0 NSD Cys-His rich domain zf-C3HC4 PF00097.25 ORF83221 - 1.3 8.9 12.9 15 5.6 13.4 2.4 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-B_box PF00643.24 ORF83221 - 8 6.7 12.0 10 6.4 9.3 2.2 2 0 0 2 2 2 0 B-box zinc finger zf-C3HC4_2 PF13923.6 ORF83221 - 8.4 6.3 15.7 0.28 11.0 8.9 2.0 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C2HCIx2C PF10782.9 ORF81001 - 0.39 10.7 4.8 0.87 9.6 0.1 2.6 2 1 0 2 2 2 0 Zinc-finger SCIFF PF13165.6 ORF81001 - 0.46 10.5 5.3 0.45 10.5 1.1 2.5 2 0 0 2 2 2 0 Six-cysteine peptide SCIFF Aldedh PF00171.22 ORF80147 - 1.9e-13 49.8 0.1 2.2e-13 49.6 0.1 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Peptidase_C71 PF12386.8 ORF80147 - 0.058 13.0 0.0 0.094 12.4 0.0 1.3 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei AvrRpt-cleavage PF05627.11 ORF78980 - 0.063 12.6 0.1 0.15 11.5 0.1 1.6 1 0 0 1 1 1 0 Cleavage site for pathogenic type III effector avirulence factor Avr DUF724 PF05266.14 ORF77887 - 0.0033 17.3 0.8 0.17 11.7 0.1 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF724) PPR_2 PF13041.6 ORF76982 - 2.2e-16 59.7 0.1 7.7e-09 35.6 0.0 3.4 2 2 3 5 5 5 3 PPR repeat family PPR PF01535.20 ORF76982 - 9.6e-13 47.5 0.6 0.007 16.5 0.0 4.4 4 0 0 4 4 4 3 PPR repeat PPR_3 PF13812.6 ORF76982 - 1.2e-11 44.5 0.0 2.5e-06 27.4 0.0 3.1 2 1 1 3 3 3 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF76982 - 3.1e-05 23.6 0.6 0.25 11.1 0.0 3.6 4 0 0 4 4 4 2 PPR repeat PPR_long PF17177.4 ORF76982 - 0.0015 17.9 0.1 1.4 8.3 0.1 2.2 1 1 0 2 2 2 2 Pentacotripeptide-repeat region of PRORP BRCA-2_OB1 PF09103.10 ORF76982 - 0.053 13.5 0.0 0.13 12.3 0.0 1.6 2 0 0 2 2 2 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 Pellino PF04710.14 ORF76982 - 0.065 11.9 0.2 0.51 9.0 0.1 1.8 1 1 0 2 2 2 0 Pellino DUF5585 PF17823.1 ORF7547 - 0.16 10.9 8.1 0.17 10.8 8.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5585) zf-C4pol PF14260.6 ORF75215 - 5.4e-08 33.2 8.6 1e-07 32.3 8.6 1.5 1 1 0 1 1 1 1 C4-type zinc-finger of DNA polymerase delta DUF2614 PF11023.8 ORF75215 - 0.46 10.6 1.8 2.5 8.2 0.1 2.1 1 1 1 2 2 2 0 Zinc-ribbon containing domain GAS PF13851.6 ORF75154 - 0.00033 20.1 24.1 0.00033 20.1 24.1 1.4 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF75154 - 0.0012 16.5 20.0 0.0013 16.4 20.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Fib_alpha PF08702.10 ORF75154 - 0.0057 16.8 16.2 0.0057 16.8 16.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family SlyX PF04102.12 ORF75154 - 0.046 14.4 13.9 0.29 11.8 3.1 2.6 1 1 1 2 2 2 0 SlyX DUF948 PF06103.11 ORF75154 - 0.1 12.9 1.5 0.19 12.0 1.3 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 ORF75154 - 0.12 11.6 18.9 0.043 13.1 16.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Atg14 PF10186.9 ORF75154 - 0.17 11.0 21.5 0.23 10.5 21.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF75154 - 0.18 10.7 23.6 0.21 10.4 23.1 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF75154 - 0.19 11.8 14.0 0.33 11.0 10.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Tnp_22_trimer PF17489.2 ORF75154 - 0.34 10.9 9.0 3.2 7.8 0.8 2.8 2 1 0 2 2 2 0 L1 transposable element trimerization domain UPF0242 PF06785.11 ORF75154 - 0.42 10.7 29.7 0.78 9.8 29.7 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Muted PF14942.6 ORF75154 - 0.47 10.8 25.8 0.14 12.5 22.0 1.9 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein AAA_13 PF13166.6 ORF75154 - 0.47 9.0 24.1 0.014 14.1 13.5 1.8 1 1 0 1 1 1 0 AAA domain HemX PF04375.14 ORF75154 - 0.72 9.1 16.3 0.12 11.7 12.3 1.7 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Cep57_MT_bd PF06657.13 ORF75154 - 0.77 10.3 20.1 0.16 12.4 6.7 3.3 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF4407 PF14362.6 ORF75154 - 1.3 8.4 15.1 1.4 8.2 15.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) IFT57 PF10498.9 ORF75154 - 1.6 7.6 24.1 0.21 10.5 19.3 1.7 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Nup88 PF10168.9 ORF75154 - 1.6 6.5 17.1 1.7 6.4 17.1 1.2 1 0 0 1 1 1 0 Nuclear pore component Laminin_II PF06009.12 ORF75154 - 1.7 8.7 17.4 1.7 8.6 12.2 2.1 1 1 1 2 2 2 0 Laminin Domain II Exonuc_VII_L PF02601.15 ORF75154 - 1.9 8.0 15.9 2 7.9 15.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_2 PF01920.20 ORF75154 - 4 7.4 28.6 0.48 10.4 8.3 3.4 1 1 1 2 2 2 0 Prefoldin subunit Malate_DH PF12434.8 ORF75154 - 4.9 7.3 6.9 31 4.7 0.7 3.2 2 1 1 3 3 3 0 Malate dehydrogenase enzyme Prefoldin PF02996.17 ORF75154 - 5.5 6.9 20.9 0.23 11.4 5.8 3.4 1 1 3 4 4 4 0 Prefoldin subunit Swi5 PF07061.11 ORF75154 - 6.5 6.9 21.2 1.5 9.0 5.3 3.1 2 1 1 3 3 3 0 Swi5 Tweety PF04906.13 ORF75154 - 8.3 5.0 8.9 6.8 5.2 2.3 2.0 1 1 1 2 2 2 0 Tweety Phage_GPO PF05929.11 ORF75154 - 8.3 5.9 15.2 17 4.9 15.2 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase V_ATPase_I PF01496.19 ORF75154 - 8.4 4.2 17.5 9.1 4.0 17.5 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MctB PF11382.8 ORF75154 - 10 5.8 11.2 1.6 8.4 4.0 2.1 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB Ax_dynein_light PF10211.9 ORF74863 - 1e-59 201.6 15.2 1.2e-59 201.5 15.2 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain RIB43A PF05914.12 ORF74863 - 0.00074 18.4 9.2 0.00092 18.1 9.2 1.1 1 0 0 1 1 1 1 RIB43A Spc7 PF08317.11 ORF74863 - 0.043 12.7 8.9 0.055 12.4 8.9 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein FapA PF03961.13 ORF74863 - 0.15 10.6 3.9 0.18 10.4 3.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF2681 PF10883.8 ORF74863 - 2 8.9 12.0 3.8 8.0 6.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) CIAPIN1 PF05093.13 ORF74863 - 2.4 8.7 6.6 9 6.9 6.6 1.9 1 1 0 1 1 1 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis DivIC PF04977.15 ORF74863 - 7.1 6.5 9.9 2.1 8.2 5.3 2.2 1 1 1 2 2 2 0 Septum formation initiator Copper-fist PF00649.18 ORF74337 - 0.02 14.4 0.9 0.02 14.4 0.9 2.0 2 0 0 2 2 2 0 Copper fist DNA binding domain PHD_Oberon PF07227.11 ORF74337 - 0.1 12.5 4.9 0.14 12.0 4.9 1.2 1 0 0 1 1 1 0 PHD - plant homeodomain finger protein Macoilin PF09726.9 ORF74153 - 9.6 4.6 22.4 15 4.0 22.4 1.2 1 0 0 1 1 1 0 Macoilin family Duffy_binding PF05424.11 ORF71841 - 0.0077 16.3 0.5 0.014 15.4 0.5 1.4 1 1 0 1 1 1 1 Duffy binding domain LZ_Tnp_IS481 PF13011.6 ORF67818 - 3 8.4 6.3 1.8 9.2 1.8 2.3 1 1 1 2 2 2 0 leucine-zipper of insertion element IS481 MoaC PF01967.21 ORF65030 - 8.9e-58 194.2 1.6 1e-57 194.0 1.6 1.0 1 0 0 1 1 1 1 MoaC family Fimbrillin_C PF15495.6 ORF64526 - 0.0095 16.4 1.7 0.017 15.5 1.7 1.4 1 0 0 1 1 1 1 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal DUF1430 PF07242.11 ORF64526 - 0.013 15.7 0.1 0.026 14.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) MutS_III PF05192.18 ORF64526 - 0.014 15.6 2.7 0.017 15.3 2.7 1.1 1 0 0 1 1 1 0 MutS domain III ABC2_membrane_3 PF12698.7 ORF64526 - 0.041 13.0 2.9 0.043 12.9 2.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein PheRS_DBD2 PF18554.1 ORF64526 - 0.13 12.3 0.7 0.43 10.6 0.7 1.9 1 0 0 1 1 1 0 PheRS DNA binding domain 2 DUF2408 PF10303.9 ORF64526 - 1.8 9.2 7.6 6.6 7.3 7.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) zf-CCCH PF00642.24 ORF64250 - 0.0086 16.0 0.7 0.024 14.5 0.7 1.9 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) TLD PF07534.16 ORF60389 - 3.4e-31 108.3 4.0 3.9e-31 108.1 4.0 1.0 1 0 0 1 1 1 1 TLD ADIP PF11559.8 ORF57873 - 0.013 15.6 6.3 0.013 15.6 6.3 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding ZapB PF06005.12 ORF57873 - 0.017 15.5 5.7 0.017 15.5 5.7 3.3 1 1 1 3 3 3 0 Cell division protein ZapB DUF676 PF05057.14 ORF57873 - 0.033 13.7 2.4 0.038 13.5 1.9 1.4 1 1 0 1 1 1 0 Putative serine esterase (DUF676) Seryl_tRNA_N PF02403.22 ORF57873 - 0.22 11.8 22.9 0.19 12.0 19.5 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain SHE3 PF17078.5 ORF57873 - 0.3 10.8 23.4 2.5 7.8 4.0 2.5 1 1 1 2 2 2 0 SWI5-dependent HO expression protein 3 PRKG1_interact PF15898.5 ORF57873 - 0.36 11.8 25.2 1.9e+02 3.0 24.5 3.0 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain APG6_N PF17675.1 ORF57873 - 0.48 10.9 28.3 5.3 7.6 11.1 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region TPR_MLP1_2 PF07926.12 ORF57873 - 0.68 10.0 25.6 1.1 9.3 15.8 2.4 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein LXG PF04740.12 ORF57873 - 0.68 9.6 17.6 1.4 8.6 17.6 1.5 1 1 0 1 1 1 0 LXG domain of WXG superfamily Mod_r PF07200.13 ORF57873 - 0.69 10.0 24.2 0.31 11.1 14.2 2.1 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Cor1 PF04803.12 ORF57873 - 0.95 9.7 25.2 4.4 7.5 24.6 1.9 1 1 0 1 1 1 0 Cor1/Xlr/Xmr conserved region DUF4672 PF15716.5 ORF57873 - 2.1 7.9 8.0 1.6 8.3 6.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4672) DUF4407 PF14362.6 ORF57873 - 3.5 6.9 18.4 0.16 11.3 10.7 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Jnk-SapK_ap_N PF09744.9 ORF57873 - 8.4 6.6 25.9 0.85 9.8 13.8 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DNA_topoisoIV PF00521.20 ORF57873 - 8.7 5.1 17.6 11 4.8 17.6 1.2 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A DUF948 PF06103.11 ORF57873 - 9.2 6.6 11.4 7 7.0 1.5 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) CrgA PF06781.12 ORF57157 - 0.13 12.3 1.4 0.33 11.0 0.0 2.0 2 1 0 2 2 2 0 Cell division protein CrgA Tmemb_161AB PF10268.9 ORF57157 - 0.73 8.4 14.7 3.9 6.0 14.4 1.8 1 1 0 1 1 1 0 Predicted transmembrane protein 161AB DUF996 PF06195.13 ORF57157 - 1.8 8.9 17.3 0.44 10.8 9.4 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF996) PHO4 PF01384.20 ORF57157 - 2.1 7.3 5.6 2.5 7.1 5.6 1.3 1 0 0 1 1 1 0 Phosphate transporter family Sec20 PF03908.13 ORF54444 - 1.1e-05 25.2 3.4 7.7e-05 22.5 0.5 2.6 1 1 1 2 2 2 1 Sec20 V-SNARE_C PF12352.8 ORF54444 - 6.8e-05 23.1 2.9 6.8e-05 23.1 2.9 1.6 2 0 0 2 2 2 1 Snare region anchored in the vesicle membrane C-terminus Chordopox_G2 PF05796.12 ORF54444 - 0.038 13.4 1.1 0.047 13.1 1.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus protein G2 RabGAP-TBC PF00566.18 ORF54444 - 0.068 12.8 1.2 0.097 12.3 0.7 1.4 1 1 0 1 1 1 0 Rab-GTPase-TBC domain Laminin_II PF06009.12 ORF54444 - 0.082 12.9 4.8 0.48 10.4 0.6 2.1 1 1 1 2 2 2 0 Laminin Domain II Prefoldin_2 PF01920.20 ORF54444 - 0.11 12.5 2.4 0.26 11.3 0.1 2.2 2 0 0 2 2 2 0 Prefoldin subunit DUF1640 PF07798.11 ORF54444 - 0.24 11.4 6.7 0.92 9.5 6.7 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) TssN PF17555.2 ORF54444 - 0.34 10.2 5.9 0.13 11.6 1.0 2.0 2 0 0 2 2 2 0 Type VI secretion system, TssN YabA PF06156.13 ORF54444 - 2.2 9.0 5.9 7.5 7.3 5.9 1.9 1 1 0 1 1 1 0 Initiation control protein YabA DASH_Dad1 PF08649.10 ORF54444 - 2.4 8.4 5.7 10 6.4 0.0 2.7 3 0 0 3 3 3 0 DASH complex subunit Dad1 EF-hand_1 PF00036.32 ORF53005 - 9.1e-08 31.1 0.2 0.011 15.2 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF53005 - 1e-06 28.2 1.5 0.035 14.0 0.0 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF53005 - 3.9e-06 27.2 7.6 0.011 16.2 1.9 2.3 1 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF53005 - 1.5e-05 24.2 0.5 0.014 14.9 0.1 2.7 2 0 0 2 2 2 2 EF hand PPP4R2 PF09184.11 ORF53005 - 1.8 8.0 16.3 2.2 7.8 16.3 1.2 1 0 0 1 1 1 0 PPP4R2 THOC2_N PF16134.5 ORF53005 - 2.1 6.9 6.7 3.2 6.3 6.7 1.3 1 0 0 1 1 1 0 THO complex subunit 2 N-terminus RPN2_C PF18004.1 ORF53005 - 5 7.0 7.7 6.9 6.6 7.7 1.3 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain DUF4795 PF16043.5 ORF52019 - 0.032 13.8 0.0 0.045 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF3778 PF12620.8 ORF50771 - 0.1 12.2 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3778) DUF496 PF04363.12 ORF50771 - 0.49 10.4 3.9 0.37 10.8 2.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF496) CLIP PF12032.8 ORF50068 - 0.081 13.2 0.0 0.33 11.3 0.0 2.0 1 1 1 2 2 2 0 Regulatory CLIP domain of proteinases BESS PF02944.20 ORF44818 - 0.055 13.3 0.3 0.093 12.6 0.3 1.4 1 0 0 1 1 1 0 BESS motif PMSI1 PF15322.6 ORF43412 - 0.45 9.9 5.4 0.59 9.5 5.4 1.1 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative Tubulin_C PF03953.17 ORF4182 - 3.8e-14 52.9 0.1 6.2e-14 52.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Presenilin PF01080.17 ORF40182 - 0.91 8.2 2.0 1.2 7.9 2.0 1.0 1 0 0 1 1 1 0 Presenilin PP2C PF00481.21 ORF39800 - 7.3e-24 84.8 0.0 8.7e-24 84.5 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF39800 - 8.2e-05 22.6 0.0 9.8e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) AgrB PF04647.15 ORF38198 - 0.016 14.6 2.6 0.022 14.1 2.6 1.2 1 0 0 1 1 1 0 Accessory gene regulator B Ank_2 PF12796.7 ORF3798 - 3.2e-06 27.6 0.1 4.8e-06 27.1 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF3798 - 0.0025 18.2 0.1 0.23 12.1 0.0 3.0 3 0 0 3 3 3 1 Ankyrin repeat Ank_4 PF13637.6 ORF3798 - 0.016 15.8 0.0 0.036 14.6 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeats (many copies) DnaJ_CXXCXGXG PF00684.19 ORF35560 - 0.0027 18.0 12.9 0.31 11.4 9.3 2.8 1 1 2 3 3 3 3 DnaJ central domain AFP PF02420.15 ORF35560 - 0.06 13.7 5.1 0.64 10.5 1.6 2.8 2 0 0 2 2 2 0 Insect antifreeze protein repeat zf-C4pol PF14260.6 ORF35560 - 0.062 13.8 5.5 0.36 11.3 0.8 2.9 2 1 1 3 3 3 0 C4-type zinc-finger of DNA polymerase delta Sulfatase_C PF14707.6 ORF35560 - 0.28 11.9 1.3 0.55 11.0 1.3 1.4 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase zf-4CXXC_R1 PF10497.9 ORF35560 - 0.29 11.4 7.7 0.14 12.4 2.5 2.4 1 1 1 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Snapin_Pallidin PF14712.6 ORF35560 - 0.51 10.8 3.9 0.46 10.9 2.7 1.5 2 0 0 2 2 2 0 Snapin/Pallidin Sds3 PF08598.11 ORF35560 - 0.95 9.4 3.5 1.5 8.8 3.5 1.3 1 0 0 1 1 1 0 Sds3-like PhnA_Zn_Ribbon PF08274.12 ORF35560 - 1.8 8.6 7.3 4.6 7.3 0.4 3.0 3 0 0 3 3 3 0 PhnA Zinc-Ribbon GNT-I PF03071.15 ORF35218 - 0.3 9.8 0.0 0.36 9.5 0.0 1.0 1 0 0 1 1 1 0 GNT-I family Metaviral_G PF09595.10 ORF35111 - 1.3 9.0 4.9 1.6 8.7 4.9 1.3 1 0 0 1 1 1 0 Metaviral_G glycoprotein RRXRR PF14239.6 ORF34947 - 0.043 13.7 0.3 0.068 13.0 0.3 1.3 1 0 0 1 1 1 0 RRXRR protein Shisa PF13908.6 ORF34866 - 9.3e-05 22.7 0.5 0.00011 22.5 0.5 1.2 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator COX2_TM PF02790.15 ORF34866 - 0.016 15.3 0.1 0.026 14.7 0.1 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain LapA_dom PF06305.11 ORF34866 - 0.064 13.1 0.1 0.092 12.6 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Pkinase PF00069.25 ORF3366 - 9.5e-05 21.9 0.2 0.0002 20.8 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain GLTSCR1 PF15249.6 ORF3366 - 0.011 16.1 0.2 0.016 15.7 0.2 1.3 1 0 0 1 1 1 0 Conserved region of unknown function on GLTSCR protein PRMT5 PF05185.16 ORF3366 - 0.055 13.3 0.5 0.079 12.8 0.5 1.2 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase Pkinase PF00069.25 ORF33577 - 3e-21 76.0 0.1 3.6e-21 75.7 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33577 - 9.4e-08 31.6 0.1 1.3e-07 31.2 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Shisa PF13908.6 ORF31526 - 0.0014 18.9 2.9 0.0018 18.6 2.9 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF742 PF05331.11 ORF31526 - 0.018 14.9 0.1 0.035 13.9 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF742) AJAP1_PANP_C PF15298.6 ORF31526 - 0.073 13.3 0.2 0.095 12.9 0.2 1.3 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF4713 PF15831.5 ORF31526 - 1.4 9.4 12.6 2.3 8.7 12.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) Prominin PF05478.11 ORF31526 - 7 4.5 8.4 7.8 4.3 8.4 1.0 1 0 0 1 1 1 0 Prominin PMSI1 PF15322.6 ORF28658 - 2.4 7.5 6.7 3.5 7.0 6.7 1.3 1 1 0 1 1 1 0 Protein missing in infertile sperm 1, putative RskA PF10099.9 ORF27745 - 0.38 11.0 20.9 0.48 10.7 20.9 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA Tic110 PF16940.5 ORF27745 - 9.1 4.6 12.8 12 4.2 12.8 1.2 1 0 0 1 1 1 0 Chloroplast envelope transporter YlqD PF11068.8 ORF26354 - 0.00026 21.3 3.3 0.00053 20.4 3.3 1.4 1 0 0 1 1 1 1 YlqD protein V_ATPase_I PF01496.19 ORF26354 - 0.005 14.8 0.7 0.005 14.8 0.7 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Lebercilin PF15619.6 ORF26354 - 0.0059 16.3 5.4 0.009 15.7 5.4 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease RE_TaqI PF09573.10 ORF26354 - 0.0069 16.2 3.0 0.0094 15.8 3.0 1.1 1 0 0 1 1 1 1 TaqI restriction endonuclease DUF3450 PF11932.8 ORF26354 - 0.044 13.1 2.5 0.056 12.7 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) NUP214 PF16755.5 ORF26354 - 0.066 12.4 3.2 0.069 12.4 3.2 1.0 1 0 0 1 1 1 0 Nucleoporin or Nuclear pore complex subunit NUP214=Nup159 Tho2 PF11262.8 ORF26354 - 0.12 11.6 3.2 0.15 11.2 3.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 bZIP_1 PF00170.21 ORF26354 - 0.15 12.2 8.5 0.57 10.3 3.5 2.3 1 1 1 2 2 2 0 bZIP transcription factor TSC22 PF01166.18 ORF26354 - 0.27 11.5 3.4 1.6 9.1 0.9 2.3 2 0 0 2 2 2 0 TSC-22/dip/bun family DUF4806 PF16064.5 ORF26354 - 0.32 11.3 3.8 5.9 7.3 0.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4806) FliD_N PF02465.18 ORF26354 - 1.7 9.4 7.6 0.78 10.5 2.9 2.1 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus XhlA PF10779.9 ORF26354 - 3.9 7.8 6.6 0.73 10.1 1.7 2.2 2 1 0 2 2 2 0 Haemolysin XhlA UPF0242 PF06785.11 ORF26262 - 0.13 12.3 1.9 0.11 12.6 0.3 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus zf-C2H2 PF00096.26 ORF24489 - 4.4e-11 42.6 15.4 6.5e-06 26.3 0.1 3.5 4 0 0 4 4 4 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF24489 - 7.9e-10 38.7 13.2 1.5e-09 37.8 2.4 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF24489 - 3.4e-06 27.4 11.0 0.012 16.4 3.6 3.2 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF24489 - 9.8e-06 25.2 10.8 0.00051 19.7 0.9 3.6 3 0 0 3 3 3 2 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 ORF24489 - 3.8e-05 23.9 1.9 3.8e-05 23.9 1.9 1.7 2 0 0 2 2 2 1 C2H2-type zinc ribbon zf-H2C2_5 PF13909.6 ORF24489 - 0.021 14.6 0.1 0.021 14.6 0.1 4.1 3 1 0 3 3 3 0 C2H2-type zinc-finger domain zf-C2HE PF16278.5 ORF24489 - 2.9 8.4 8.8 5e+02 1.2 8.7 2.4 1 1 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger Skp1 PF01466.19 ORF22657 - 2.2e-25 88.5 0.5 4.3e-25 87.6 0.5 1.5 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF22657 - 1.2e-17 63.8 0.9 2.7e-17 62.7 0.9 1.6 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain BTB PF00651.31 ORF22657 - 0.0019 18.4 0.1 0.021 15.0 0.1 2.2 1 1 0 1 1 1 1 BTB/POZ domain Pkinase PF00069.25 ORF22173 - 2.3e-15 56.7 0.0 3.1e-15 56.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22173 - 7.4e-09 35.3 0.0 9.7e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase zf-C3HC4_4 PF15227.6 ORF1840 - 0.075 13.2 0.2 0.18 12.0 0.2 1.7 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING 4HBT PF03061.22 ORF17823 - 4.4e-16 59.0 0.1 6.2e-16 58.5 0.1 1.3 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 ORF17823 - 0.0016 18.7 0.0 0.0022 18.3 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Synaptobrevin PF00957.21 ORF16218 - 0.038 13.8 1.7 0.099 12.4 1.4 2.0 1 1 0 1 1 1 0 Synaptobrevin OppC_N PF12911.7 ORF16218 - 0.11 12.5 0.1 0.19 11.8 0.1 1.4 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C Sigma54_AID PF00309.20 ORF15990 - 2 8.4 8.2 0.11 12.3 1.5 2.2 3 0 0 3 3 3 0 Sigma-54 factor, Activator interacting domain (AID) PsaM PF07465.13 ORF15971 - 0.12 12.2 0.4 0.21 11.3 0.0 1.6 2 0 0 2 2 2 0 Photosystem I protein M (PsaM) DUF2975 PF11188.8 ORF15755 - 0.21 11.5 3.4 3.7 7.5 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2975) SR-25 PF10500.9 ORF152998 - 1.5 8.3 3.5 2 8.0 3.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein UAA PF08449.11 ORF152541 - 2.7e-18 66.2 2.7 3e-18 66.1 2.7 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF152541 - 0.86 9.8 7.1 1.5 9.0 7.1 1.4 1 1 0 1 1 1 0 EamA-like transporter family DUF2079 PF09852.9 ORF151007 - 0.01 14.7 3.9 0.01 14.7 3.9 1.8 2 0 0 2 2 2 0 Predicted membrane protein (DUF2079) Myb_DNA-binding PF00249.31 ORF150816 - 1.1e-12 47.9 0.3 1.8e-12 47.2 0.3 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF150816 - 0.00095 19.4 0.8 0.002 18.3 0.8 1.6 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF150816 - 0.0018 18.1 0.6 0.0018 18.1 0.6 2.4 1 1 1 2 2 2 1 Myb DNA-binding like PARP PF00644.20 ORF150645 - 0.00073 19.2 0.7 0.001 18.7 0.5 1.4 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain WSS_VP PF12175.8 ORF150017 - 0.016 14.7 0.1 0.023 14.2 0.1 1.2 1 0 0 1 1 1 0 White spot syndrome virus structural envelope protein VP zf-TAZ PF02135.16 ORF150017 - 0.13 12.8 2.4 0.19 12.2 2.4 1.3 1 0 0 1 1 1 0 TAZ zinc finger CCDC14 PF15254.6 ORF149462 - 0.47 9.0 2.1 0.5 9.0 2.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 UPF0242 PF06785.11 ORF148776 - 0.13 12.3 1.9 0.11 12.6 0.3 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus PK_C PF02887.16 ORF147926 - 2.8e-30 104.9 0.3 3.7e-30 104.5 0.3 1.2 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain PK PF00224.21 ORF147926 - 2.2e-07 30.1 0.0 3.1e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain BTG PF07742.12 ORF147137 - 0.31 10.9 0.1 0.31 10.9 0.1 2.0 2 0 0 2 2 2 0 BTG family PP2C PF00481.21 ORF146993 - 1.9e-15 57.2 0.0 2.2e-15 57.0 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF146993 - 0.00084 19.3 0.0 0.00092 19.2 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) DUF1772 PF08592.11 ORF146684 - 0.023 15.0 1.9 0.032 14.6 1.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) GAS PF13851.6 ORF14334 - 0.00033 20.1 24.1 0.00033 20.1 24.1 1.4 2 0 0 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF14334 - 0.0012 16.5 20.0 0.0013 16.4 20.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Fib_alpha PF08702.10 ORF14334 - 0.0057 16.8 16.2 0.0057 16.8 16.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family SlyX PF04102.12 ORF14334 - 0.046 14.4 13.9 0.29 11.8 3.1 2.6 1 1 1 2 2 2 0 SlyX DUF948 PF06103.11 ORF14334 - 0.1 12.9 1.5 0.19 12.0 1.3 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF3450 PF11932.8 ORF14334 - 0.12 11.6 18.9 0.043 13.1 16.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Atg14 PF10186.9 ORF14334 - 0.17 11.0 21.5 0.23 10.5 21.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF14334 - 0.18 10.7 23.6 0.21 10.4 23.1 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF14334 - 0.19 11.8 14.0 0.33 11.0 10.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Tnp_22_trimer PF17489.2 ORF14334 - 0.34 10.9 9.0 3.2 7.8 0.8 2.8 2 1 0 2 2 2 0 L1 transposable element trimerization domain UPF0242 PF06785.11 ORF14334 - 0.42 10.7 29.7 0.78 9.8 29.7 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Muted PF14942.6 ORF14334 - 0.47 10.8 25.8 0.14 12.5 22.0 1.9 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein AAA_13 PF13166.6 ORF14334 - 0.47 9.0 24.1 0.014 14.1 13.5 1.8 1 1 0 1 1 1 0 AAA domain HemX PF04375.14 ORF14334 - 0.72 9.1 16.3 0.12 11.7 12.3 1.7 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Cep57_MT_bd PF06657.13 ORF14334 - 0.77 10.3 20.1 0.16 12.4 6.7 3.3 2 1 1 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF4407 PF14362.6 ORF14334 - 1.3 8.4 15.1 1.4 8.2 15.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) IFT57 PF10498.9 ORF14334 - 1.6 7.6 24.1 0.21 10.5 19.3 1.7 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Nup88 PF10168.9 ORF14334 - 1.6 6.5 17.1 1.7 6.4 17.1 1.2 1 0 0 1 1 1 0 Nuclear pore component Laminin_II PF06009.12 ORF14334 - 1.7 8.7 17.4 1.7 8.6 12.2 2.1 1 1 1 2 2 2 0 Laminin Domain II Exonuc_VII_L PF02601.15 ORF14334 - 1.9 8.0 15.9 2 7.9 15.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prefoldin_2 PF01920.20 ORF14334 - 4 7.4 28.6 0.48 10.4 8.3 3.4 1 1 1 2 2 2 0 Prefoldin subunit Malate_DH PF12434.8 ORF14334 - 4.9 7.3 6.9 31 4.7 0.7 3.2 2 1 1 3 3 3 0 Malate dehydrogenase enzyme Prefoldin PF02996.17 ORF14334 - 5.5 6.9 20.9 0.23 11.4 5.8 3.4 1 1 3 4 4 4 0 Prefoldin subunit Swi5 PF07061.11 ORF14334 - 6.5 6.9 21.2 1.5 9.0 5.3 3.1 2 1 1 3 3 3 0 Swi5 Tweety PF04906.13 ORF14334 - 8.3 5.0 8.9 6.8 5.2 2.3 2.0 1 1 1 2 2 2 0 Tweety Phage_GPO PF05929.11 ORF14334 - 8.3 5.9 15.2 17 4.9 15.2 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase V_ATPase_I PF01496.19 ORF14334 - 8.4 4.2 17.5 9.1 4.0 17.5 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MctB PF11382.8 ORF14334 - 10 5.8 11.2 1.6 8.4 4.0 2.1 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB PMSI1 PF15322.6 ORF142676 - 0.45 9.9 5.4 0.59 9.5 5.4 1.1 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative tRNA_lig_kinase PF08303.11 ORF140945 - 0.31 11.1 2.9 1.6 8.8 0.2 2.1 1 1 1 2 2 2 0 tRNA ligase kinase domain RPW8 PF05659.11 ORF139139 - 0.001 18.8 1.1 0.0017 18.1 1.1 1.3 1 0 0 1 1 1 1 Arabidopsis broad-spectrum mildew resistance protein RPW8 HIP1_clath_bdg PF16515.5 ORF139139 - 0.0047 17.5 6.1 0.0084 16.7 6.1 1.5 1 0 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 Angiomotin_C PF12240.8 ORF139139 - 0.0081 15.7 0.7 0.0081 15.7 0.7 1.6 1 1 1 2 2 2 1 Angiomotin C terminal YojJ PF10372.9 ORF139139 - 0.071 13.2 0.9 0.18 11.9 0.6 1.8 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus FlaC_arch PF05377.11 ORF135978 - 0.028 14.8 10.1 0.12 12.7 0.8 2.7 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) CENP-K PF11802.8 ORF135978 - 0.031 13.9 16.8 0.03 13.9 16.1 1.3 1 1 0 1 1 1 0 Centromere-associated protein K DUF4071 PF13281.6 ORF135978 - 0.12 11.5 6.6 0.13 11.3 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4071) PL48 PF15903.5 ORF135978 - 0.13 11.2 9.4 0.15 11.0 9.4 1.1 1 0 0 1 1 1 0 Filopodia upregulated, FAM65 YtxH PF12732.7 ORF135978 - 0.3 11.7 3.4 1.4 9.5 3.4 2.1 1 1 0 1 1 1 0 YtxH-like protein DUF4407 PF14362.6 ORF135978 - 2.9 7.2 14.1 5.2 6.3 14.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Exonuc_VII_L PF02601.15 ORF135978 - 6.3 6.3 10.9 7.4 6.0 10.9 1.2 1 1 0 1 1 1 0 Exonuclease VII, large subunit EF-hand_1 PF00036.32 ORF135796 - 1e-32 109.2 19.3 1.8e-09 36.5 0.4 4.3 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF135796 - 1.7e-31 108.5 8.1 8.5e-16 58.2 1.2 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF135796 - 6.2e-28 94.3 10.3 1.3e-08 34.0 0.1 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF135796 - 1.6e-20 71.6 15.6 1.5e-06 27.4 0.3 4.3 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF135796 - 5.9e-18 64.5 15.3 9e-07 28.6 1.9 4.1 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_4 PF12763.7 ORF135796 - 2.4e-09 37.1 8.6 5.5e-05 23.1 0.1 3.1 1 1 2 3 3 3 3 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF135796 - 4.7e-09 36.6 2.4 0.0011 19.2 0.1 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF135796 - 1.1e-07 32.0 0.6 0.0022 18.3 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EFhand_Ca_insen PF08726.10 ORF135796 - 0.0017 18.4 0.7 0.0038 17.3 0.1 2.0 2 1 0 2 2 2 1 Ca2+ insensitive EF hand AAA_assoc_C PF09821.9 ORF135796 - 0.017 15.7 0.5 0.61 10.6 0.1 2.4 1 1 1 2 2 2 0 C-terminal AAA-associated domain Hemocyanin_N PF03722.14 ORF135796 - 0.028 14.9 0.4 0.062 13.8 0.2 1.6 2 0 0 2 2 2 0 Hemocyanin, all-alpha domain Caleosin PF05042.13 ORF135796 - 0.063 13.2 4.4 2.6 7.9 0.0 3.4 1 1 3 4 4 4 0 Caleosin related protein Virulence_fact PF13769.6 ORF135796 - 0.11 12.7 0.8 0.67 10.2 0.1 2.2 2 0 0 2 2 2 0 Virulence factor DUF3349 PF11829.8 ORF135796 - 0.13 13.1 0.3 0.63 10.8 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) Filament_head PF04732.14 ORF133891 - 6.8 7.6 11.4 2.5 9.0 8.5 1.7 2 0 0 2 2 2 0 Intermediate filament head (DNA binding) region PseudoU_synth_2 PF00849.22 ORF133737 - 1.9e-05 24.8 0.1 3.5e-05 24.0 0.1 1.5 1 0 0 1 1 1 1 RNA pseudouridylate synthase Herpes_UL32 PF06070.11 ORF131179 - 1.7 6.3 5.5 2.2 5.9 5.5 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 TctB PF07331.11 ORF129383 - 0.0078 16.5 5.3 0.014 15.6 5.3 1.4 1 1 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family Ost4 PF10215.9 ORF129383 - 0.04 13.8 0.5 0.28 11.0 0.1 2.4 2 0 0 2 2 2 0 Oligosaccaryltransferase Na_Ca_ex PF01699.24 ORF129383 - 0.15 12.0 5.6 0.73 9.8 2.1 2.2 2 0 0 2 2 2 0 Sodium/calcium exchanger protein AvrRpt-cleavage PF05627.11 ORF126426 - 0.072 12.5 0.1 0.15 11.5 0.1 1.5 1 0 0 1 1 1 0 Cleavage site for pathogenic type III effector avirulence factor Avr PTPA PF03095.15 ORF126021 - 1.3e-52 179.2 0.0 1.5e-52 179.0 0.0 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein DUF1989 PF09347.10 ORF123351 - 0.12 12.0 0.3 0.16 11.6 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) Patched PF02460.18 ORF123351 - 0.27 9.3 3.4 0.27 9.3 3.4 1.1 1 0 0 1 1 1 0 Patched family DUF2462 PF09495.10 ORF123351 - 0.32 11.8 2.4 7.6 7.4 0.4 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2462) SHIPPO-rpt PF07004.12 ORF122574 - 5.2e-05 24.0 24.3 0.0062 17.4 0.6 5.1 5 0 0 5 5 5 3 Sperm-tail PG-rich repeat Proteasom_Rpn13 PF04683.13 ORF120037 - 3.8e-27 94.6 1.0 5.7e-27 94.1 1.0 1.3 1 0 0 1 1 1 1 Proteasome complex subunit Rpn13 ubiquitin receptor DUF5069 PF16798.5 ORF120037 - 0.016 15.4 0.0 0.032 14.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5069) zf-RING_UBOX PF13445.6 ORF119277 - 0.066 13.3 0.5 0.066 13.3 0.5 2.2 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_5 PF14634.6 ORF119277 - 0.1 12.6 0.8 0.1 12.6 0.8 2.2 2 0 0 2 2 2 0 zinc-RING finger domain Methyltransf_11 PF08241.12 ORF11891 - 7.4e-10 39.3 0.0 1e-09 38.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF11891 - 7.9e-10 38.7 0.0 8.8e-10 38.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF11891 - 2.1e-09 38.0 0.0 2.9e-09 37.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF11891 - 6.6e-09 36.4 0.0 9.8e-09 35.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF11891 - 6.4e-08 32.6 0.0 7.2e-08 32.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF11891 - 0.004 16.8 0.0 0.0059 16.2 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CheR PF01739.18 ORF11891 - 0.061 12.8 0.0 2.9 7.3 0.0 2.1 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain PMSI1 PF15322.6 ORF118255 - 0.45 9.9 5.4 0.59 9.5 5.4 1.1 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative Pyr_redox_dim PF02852.22 ORF115351 - 2.2e-15 56.8 0.4 5e-15 55.7 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Palm_thioest PF02089.15 ORF114590 - 1e-32 113.9 0.0 1.2e-32 113.7 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF2845 PF11006.8 ORF112582 - 0.044 13.9 1.8 0.34 11.0 0.5 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2845) DUF2830 PF11125.8 ORF111032 - 0.32 11.0 0.0 0.32 11.0 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2830) Peptidase_U4 PF03419.13 ORF111032 - 0.97 8.7 6.1 1.4 8.1 6.1 1.3 1 0 0 1 1 1 0 Sporulation factor SpoIIGA LAP2alpha PF11560.8 ORF11032 - 0.019 14.4 0.2 0.029 13.8 0.2 1.3 1 0 0 1 1 1 0 Lamina-associated polypeptide 2 alpha EPL1 PF10513.9 ORF108336 - 1.7 9.0 15.9 2.8 8.3 15.9 1.3 1 0 0 1 1 1 0 Enhancer of polycomb-like TerB_C PF15615.6 ORF108336 - 3.5 7.9 8.7 6.1 7.1 8.7 1.5 1 1 0 1 1 1 0 TerB-C domain DUF572 PF04502.13 ORF108336 - 4.6 6.8 28.0 5.2 6.6 28.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) Presenilin PF01080.17 ORF108336 - 6.9 5.3 14.7 7.9 5.1 14.7 1.1 1 0 0 1 1 1 0 Presenilin Orthopox_A36R PF05950.11 ORF107589 - 0.17 12.0 1.1 1.8 8.7 0.1 2.0 1 1 1 2 2 2 0 Orthopoxvirus A36R protein Pacifastin_I PF05375.13 ORF107351 - 8.9e-06 25.3 36.3 0.0014 18.3 5.1 3.4 3 0 0 3 3 3 3 Pacifastin inhibitor (LCMII) CLTH PF10607.9 ORF106972 - 1.7e-20 73.4 8.2 2.8e-20 72.7 8.2 1.3 1 0 0 1 1 1 1 CTLH/CRA C-terminal to LisH motif domain LisH PF08513.11 ORF106972 - 2.7e-10 39.8 0.1 5.2e-10 38.9 0.1 1.5 1 0 0 1 1 1 1 LisH DUF4901 PF16244.5 ORF106972 - 0.034 13.5 0.2 0.061 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4901) Ribosomal_L36e PF01158.18 ORF106972 - 0.065 13.5 0.3 0.12 12.7 0.3 1.5 1 0 0 1 1 1 0 Ribosomal protein L36e Anthrax_toxA PF03497.16 ORF106972 - 0.32 11.1 3.9 1.4 9.0 0.7 2.1 1 1 1 2 2 2 0 Anthrax toxin LF subunit nec1 PF10379.9 ORF106234 - 0.036 13.6 0.2 0.087 12.3 0.2 1.7 1 1 0 1 1 1 0 Virulence protein nec1 Borrelia_orfD PF02999.14 ORF105600 - 0.013 15.8 0.2 0.018 15.3 0.2 1.2 1 0 0 1 1 1 0 Borrelia orf-D family HTH_33 PF13592.6 ORF103545 - 0.099 12.3 0.1 0.22 11.2 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn helix Glyco_trans_4_4 PF13579.6 ORF1033 - 0.069 13.6 0.9 0.084 13.3 0.9 1.2 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain UPF0242 PF06785.11 ORF103258 - 0.13 12.3 1.9 0.11 12.6 0.3 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF525 PF04379.14 NODE_42430_length_478_cov_4.943567_g34818_i0forward_frame_1 - 0.034 14.4 0.1 0.051 13.8 0.1 1.2 1 0 0 1 1 1 0 ApaG domain EF-hand_6 PF13405.6 NODE_42420_length_478_cov_74.137698_g34808_i0forward_frame_1 - 0.076 13.0 0.2 0.27 11.3 0.1 2.0 2 0 0 2 2 2 0 EF-hand domain Fer4_6 PF12837.7 NODE_42415_length_478_cov_101.733634_g34803_i0reverse_frame_1 - 0.092 12.9 2.7 3.5 7.9 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain RCC1_2 PF13540.6 NODE_42409_length_478_cov_165.291196_g34797_i0forward_frame_1 - 0.00029 20.6 8.2 0.51 10.2 0.8 3.8 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat MMTV_SAg PF01054.17 NODE_42394_length_479_cov_2.569820_g34784_i0reverse_frame_1 - 0.14 11.7 0.1 0.19 11.3 0.1 1.2 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen Oxidored_q6 PF01058.22 NODE_42392_length_479_cov_2.736486_g34782_i0reverse_frame_1 - 1.3e-22 80.1 0.2 1.6e-22 79.7 0.2 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit PlyB_C PF18684.1 NODE_42386_length_479_cov_6.137387_g34776_i0reverse_frame_1 - 0.0035 17.1 0.1 0.0055 16.4 0.1 1.3 1 1 0 1 1 1 1 Pleurotolysin B C-terminal domain ALMT PF11744.8 NODE_42386_length_479_cov_6.137387_g34776_i0reverse_frame_1 - 7.5 5.3 9.7 8.6 5.1 9.7 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF3533 PF12051.8 NODE_42386_length_479_cov_6.137387_g34776_i0reverse_frame_1 - 8.1 5.3 6.1 11 4.8 6.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3533) Peptidase_M76 PF09768.9 NODE_42366_length_479_cov_92.536036_g34756_i0reverse_frame_1 - 0.056 13.2 0.1 0.09 12.6 0.1 1.4 1 1 0 1 1 1 0 Peptidase M76 family DHC_N2 PF08393.13 NODE_42366_length_479_cov_92.536036_g34756_i0forward_frame_1 - 0.078 12.1 0.0 0.093 11.8 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 2 DUF2390 PF09523.10 NODE_42366_length_479_cov_92.536036_g34756_i0forward_frame_1 - 0.079 13.3 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2390) Ank_5 PF13857.6 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 5e-25 87.2 0.1 2.4e-12 46.8 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 1.2e-23 83.1 0.1 2.4e-08 34.4 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 4.1e-20 72.1 1.0 2e-19 70.0 0.3 2.1 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 2.1e-17 62.7 0.2 1.2e-06 28.7 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_1 - 1.6e-13 49.5 0.1 6.5e-05 23.0 0.0 3.8 5 0 0 5 5 5 2 Ankyrin repeat Macoilin PF09726.9 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_1 - 5.5 5.4 15.4 6.3 5.2 15.4 1.0 1 0 0 1 1 1 0 Macoilin family UCH PF00443.29 NODE_42298_length_480_cov_80.802247_g34693_i0reverse_frame_1 - 4.7e-25 88.6 1.0 6.3e-25 88.1 1.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_42298_length_480_cov_80.802247_g34693_i0reverse_frame_1 - 5.6e-05 22.9 0.1 7.5e-05 22.5 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PPR_2 PF13041.6 NODE_42297_length_480_cov_84.865169_g34692_i0reverse_frame_1 - 0.032 14.4 0.3 0.21 11.8 0.1 2.2 2 0 0 2 2 2 0 PPR repeat family Vpu PF00558.19 NODE_42293_length_480_cov_98.712360_g34688_i0reverse_frame_1 - 0.0071 16.1 2.7 0.011 15.5 2.7 1.3 1 0 0 1 1 1 1 Vpu protein DUF390 PF04094.14 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 0.018 13.3 6.0 0.021 13.1 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) CAF-1_p150 PF11600.8 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 0.22 11.2 20.9 0.36 10.5 20.9 1.3 1 0 0 1 1 1 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal U79_P34 PF03064.16 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 0.73 9.1 14.9 0.94 8.8 14.9 1.4 1 0 0 1 1 1 0 HSV U79 / HCMV P34 GCD14 PF08704.10 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 2.2 7.9 5.5 3.3 7.3 5.5 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit EMC3_TMCO1 PF01956.16 NODE_42287_length_480_cov_141.213483_g34682_i0reverse_frame_1 - 4.9 6.9 5.0 6.7 6.4 5.0 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like S1FA PF04689.13 NODE_42276_length_480_cov_510.894382_g34671_i0reverse_frame_1 - 0.0073 16.4 3.0 0.014 15.5 3.0 1.5 1 0 0 1 1 1 1 DNA binding protein S1FA Erv26 PF04148.13 NODE_42276_length_480_cov_510.894382_g34671_i0forward_frame_1 - 0.033 14.0 11.9 0.044 13.6 11.9 1.3 1 1 0 1 1 1 0 Transmembrane adaptor Erv26 HipN PF18253.1 NODE_42275_length_480_cov_659.761798_g34670_i0reverse_frame_1 - 0.012 15.3 0.1 0.057 13.1 0.1 2.2 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain DUF4656 PF15551.6 NODE_42272_length_480_cov_1065.955056_g34667_i0forward_frame_1 - 0.071 12.6 0.6 0.085 12.4 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) PSI_PsaE PF02427.17 NODE_42270_length_480_cov_2372.741573_g34665_i0reverse_frame_1 - 5.9e-24 83.5 1.3 8.3e-24 83.0 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE DUF787 PF05619.11 NODE_42268_length_481_cov_1.381166_g34664_i0reverse_frame_3 - 0.025 13.7 2.2 0.027 13.6 2.2 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF787) DUF1656 PF07869.12 NODE_42262_length_481_cov_2.161435_g34658_i0reverse_frame_3 - 1.8e-07 31.0 5.6 4e-07 29.9 5.6 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1656) Totivirus_coat PF05518.11 NODE_42258_length_481_cov_2.365471_g34654_i0reverse_frame_3 - 3.5 5.6 4.9 4.4 5.2 4.9 1.1 1 0 0 1 1 1 0 Totivirus coat protein Herpes_glycoH_C PF17488.2 NODE_42255_length_481_cov_2.665919_g34651_i0reverse_frame_2 - 0.0023 17.7 1.4 0.0032 17.2 1.4 1.1 1 0 0 1 1 1 1 Herpesvirus glycoprotein H C-terminal domain MFS_1 PF07690.16 NODE_42255_length_481_cov_2.665919_g34651_i0forward_frame_3 - 0.029 13.3 0.0 0.032 13.1 0.0 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF2784 PF10861.8 NODE_42253_length_481_cov_2.892377_g34649_i0reverse_frame_3 - 0.041 13.9 0.1 0.076 13.1 0.1 1.4 1 0 0 1 1 1 0 Protein of Unknown function (DUF2784) DUF4834 PF16118.5 NODE_42249_length_481_cov_8.645740_g34645_i0reverse_frame_3 - 0.063 14.2 1.0 0.1 13.6 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) ATP-synt_8 PF00895.20 NODE_42249_length_481_cov_8.645740_g34645_i0reverse_frame_3 - 2.9 8.4 6.1 2.6 8.6 0.6 2.5 2 0 0 2 2 2 0 ATP synthase protein 8 Phage_holin_6_1 PF09682.10 NODE_42249_length_481_cov_8.645740_g34645_i0reverse_frame_3 - 6 7.3 8.0 40 4.7 8.0 2.2 1 1 0 1 1 1 0 Bacteriophage holin of superfamily 6 (Holin_LLH) JmjC PF02373.22 NODE_42249_length_481_cov_8.645740_g34645_i0reverse_frame_2 - 0.082 13.3 0.3 0.16 12.4 0.3 1.5 1 0 0 1 1 1 0 JmjC domain, hydroxylase DUF3794 PF12673.7 NODE_42244_length_481_cov_56.390135_g34640_i0reverse_frame_3 - 0.092 13.0 0.8 0.15 12.3 0.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3794) L27_2 PF09045.10 NODE_42244_length_481_cov_56.390135_g34640_i0reverse_frame_3 - 0.3 11.1 1.0 13 5.9 0.1 2.8 3 0 0 3 3 3 0 L27_2 CSN4_RPN5_eIF3a PF18420.1 NODE_42241_length_481_cov_61.078475_g34637_i0forward_frame_2 - 0.41 10.8 4.6 1.7 8.9 0.5 2.5 2 0 0 2 2 2 0 CSN4/RPN5/eIF3a helix turn helix domain DUF1652 PF07865.11 NODE_42236_length_481_cov_83.789238_g34632_i0reverse_frame_3 - 0.045 13.6 0.2 0.12 12.2 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) DUF1298 PF06974.13 NODE_42236_length_481_cov_83.789238_g34632_i0forward_frame_2 - 1.1e-06 28.6 0.0 1.4e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) SMN PF06003.12 NODE_42225_length_481_cov_153.008969_g32488_i1forward_frame_2 - 0.11 11.8 1.3 0.14 11.4 1.3 1.1 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) PRIMA1 PF16101.5 NODE_42225_length_481_cov_153.008969_g32488_i1forward_frame_2 - 0.54 10.3 6.4 0.81 9.7 6.4 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 DUF3290 PF11694.8 NODE_42214_length_481_cov_278.565022_g34611_i0reverse_frame_3 - 2.6 8.0 8.5 0.36 10.8 3.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3290) HAV_VP PF12944.7 NODE_42214_length_481_cov_278.565022_g34611_i0reverse_frame_3 - 3.8 7.5 5.9 1.1 9.2 1.9 1.9 1 1 1 2 2 2 0 Hepatitis A virus viral protein VP Tropomyosin_1 PF12718.7 NODE_42214_length_481_cov_278.565022_g34611_i0forward_frame_3 - 0.0022 18.1 11.8 0.0022 18.1 11.8 1.6 1 1 1 2 2 2 1 Tropomyosin like UDPGT PF00201.18 NODE_42214_length_481_cov_278.565022_g34611_i0forward_frame_3 - 0.029 13.2 2.1 0.033 13.0 2.1 1.1 1 0 0 1 1 1 0 UDP-glucoronosyl and UDP-glucosyl transferase FUSC-like PF12805.7 NODE_42214_length_481_cov_278.565022_g34611_i0forward_frame_3 - 0.3 10.1 4.7 0.36 9.9 4.7 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Corazonin PF17308.2 NODE_42214_length_481_cov_278.565022_g34611_i0forward_frame_3 - 5.7 7.3 10.3 3.7 7.9 1.8 2.7 1 1 1 2 2 2 0 Pro-corazonin Exonuc_VII_L PF02601.15 NODE_42214_length_481_cov_278.565022_g34611_i0forward_frame_3 - 7.1 6.1 12.2 9 5.8 12.2 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks156.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks156.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks156.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks156.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2396 PF09654.10 NODE_42214_length_481_cov_278.565022_g34611_i0forward_frame_2 - 0.025 14.7 3.1 0.032 14.3 2.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2396) HCMVantigenic_N PF12154.8 NODE_42213_length_481_cov_334.405830_g34610_i0reverse_frame_3 - 0.031 14.4 1.7 0.087 12.9 1.7 1.8 1 0 0 1 1 1 0 Glycoprotein B N-terminal antigenic domain of HCMV SUV3_C PF12513.8 NODE_42213_length_481_cov_334.405830_g34610_i0forward_frame_2 - 0.16 11.9 0.3 0.28 11.2 0.3 1.3 1 0 0 1 1 1 0 Mitochondrial degradasome RNA helicase subunit C terminal Glyco_hydro_20b PF02838.15 NODE_42213_length_481_cov_334.405830_g34610_i0forward_frame_2 - 0.23 12.2 0.0 0.33 11.7 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, domain 2 DUF5585 PF17823.1 NODE_42212_length_481_cov_354.872197_g34609_i0reverse_frame_3 - 0.37 9.7 19.8 0.43 9.5 19.8 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5585) zf-RanBP PF00641.18 NODE_42212_length_481_cov_354.872197_g34609_i0reverse_frame_2 - 1.3e-09 37.2 6.5 1.8e-09 36.7 6.5 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others zf-LITAF-like PF10601.9 NODE_42203_length_481_cov_1802.065022_g34601_i0forward_frame_2 - 3.9e-05 23.8 14.5 5.9e-05 23.2 14.5 1.3 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DZR PF12773.7 NODE_42203_length_481_cov_1802.065022_g34601_i0forward_frame_2 - 4.3 7.4 12.4 24 5.0 12.4 2.1 1 1 0 1 1 1 0 Double zinc ribbon Rhodanese_C PF12368.8 NODE_42203_length_481_cov_1802.065022_g34601_i0forward_frame_2 - 7.5 7.0 15.8 46 4.5 15.8 2.2 1 1 0 1 1 1 0 Rhodanase C-terminal HECA PF15353.6 NODE_42198_length_482_cov_1.456376_g34598_i0reverse_frame_3 - 0.018 15.3 1.2 0.042 14.1 1.2 1.6 1 0 0 1 1 1 0 Headcase protein family homologue DUF272 PF03312.15 NODE_42191_length_482_cov_2.861298_g34591_i0reverse_frame_2 - 0.09 13.0 2.3 5.1 7.4 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF272) DsbC_N PF10411.9 NODE_42176_length_482_cov_89.854586_g34576_i0forward_frame_3 - 0.083 12.4 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Disulfide bond isomerase protein N-terminus CIAPIN1 PF05093.13 NODE_42172_length_482_cov_109.751678_g34572_i0forward_frame_2 - 1.3e-16 60.9 22.1 3.6e-11 43.5 5.4 2.9 2 1 1 3 3 3 2 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis IQCJ-SCHIP1 PF15157.6 NODE_42168_length_482_cov_136.335570_g34568_i0forward_frame_3 - 0.14 12.0 4.5 0.27 11.1 4.5 1.5 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif Usher_TcfC PF17271.2 NODE_42168_length_482_cov_136.335570_g34568_i0forward_frame_3 - 7.7 5.2 7.1 10 4.8 7.1 1.1 1 0 0 1 1 1 0 TcfC Usher-like barrel domain DmsC PF04976.12 NODE_42167_length_482_cov_140.322148_g34567_i0forward_frame_3 - 0.12 11.8 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 DMSO reductase anchor subunit (DmsC) DUF3325 PF11804.8 NODE_42167_length_482_cov_140.322148_g34567_i0forward_frame_2 - 0.012 15.7 0.9 0.032 14.4 0.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3325) Glyco_hydro_71 PF03659.14 NODE_42163_length_482_cov_222.161074_g34563_i0forward_frame_3 - 0.13 11.0 0.8 0.18 10.6 0.8 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 71 PIH1 PF08190.12 NODE_42145_length_483_cov_3.093750_g34546_i0reverse_frame_3 - 1.2e-28 99.7 0.2 1.7e-28 99.2 0.2 1.2 1 0 0 1 1 1 1 PIH1 N-terminal domain ACP_syn_III PF08545.10 NODE_42144_length_483_cov_3.312500_g34545_i0reverse_frame_3 - 0.13 12.2 0.2 3.6 7.5 0.1 2.3 1 1 1 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Apocytochr_F_C PF01333.19 NODE_42127_length_483_cov_87.790179_g34528_i0reverse_frame_3 - 1.3 9.1 3.8 0.69 10.0 0.5 2.0 2 0 0 2 2 2 0 Apocytochrome F, C-terminal EF-hand_7 PF13499.6 NODE_42127_length_483_cov_87.790179_g34528_i0reverse_frame_2 - 0.0002 21.8 0.1 0.092 13.2 0.0 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_42127_length_483_cov_87.790179_g34528_i0reverse_frame_2 - 0.0029 17.4 0.0 0.014 15.3 0.0 2.0 2 1 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 NODE_42127_length_483_cov_87.790179_g34528_i0reverse_frame_2 - 0.11 12.1 0.0 0.28 10.8 0.0 1.7 1 0 0 1 1 1 0 EF hand YqgC PF17430.2 NODE_42120_length_483_cov_102.832589_g34522_i0forward_frame_3 - 1.7 8.7 5.7 1.6 8.8 0.2 3.1 3 1 0 3 3 3 0 Uncharacterized YqgC-like FANCI_HD1 PF14679.6 NODE_42099_length_483_cov_224.562500_g34501_i0reverse_frame_3 - 0.078 12.9 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 FANCI helical domain 1 TraI_2 PF07514.11 NODE_42099_length_483_cov_224.562500_g34501_i0reverse_frame_2 - 0.023 13.7 0.0 0.03 13.3 0.0 1.2 1 0 0 1 1 1 0 Putative helicase TrkH PF02386.16 NODE_42099_length_483_cov_224.562500_g34501_i0forward_frame_3 - 0.1 11.0 0.0 0.11 10.9 0.0 1.0 1 0 0 1 1 1 0 Cation transport protein TssO PF17561.2 NODE_42098_length_483_cov_254.060268_g34500_i0forward_frame_2 - 0.91 9.6 4.0 0.84 9.7 0.2 2.3 2 0 0 2 2 2 0 Type VI secretion system, TssO PsaM PF07465.13 NODE_42095_length_483_cov_307.002232_g34497_i0reverse_frame_3 - 0.079 12.7 1.6 0.16 11.7 1.6 1.5 1 0 0 1 1 1 0 Photosystem I protein M (PsaM) DUF4203 PF13886.6 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 1.4e-14 54.2 14.6 1.7e-14 54.0 14.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) DUF2207 PF09972.9 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.0066 15.3 2.2 0.0091 14.8 2.2 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) BatD PF13584.6 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.1 11.4 0.1 0.1 11.4 0.1 1.4 2 0 0 2 2 2 0 Oxygen tolerance DUF2530 PF10745.9 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.19 12.0 8.3 0.49 10.7 0.3 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2530) Lig_chan PF00060.26 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.29 10.9 2.4 0.44 10.4 0.1 2.1 2 0 0 2 2 2 0 Ligand-gated ion channel WBP-1 PF11669.8 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.35 11.5 0.1 0.35 11.5 0.1 1.9 2 0 0 2 2 2 0 WW domain-binding protein 1 TatC PF00902.18 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.49 10.2 8.8 1 9.1 0.6 2.0 1 1 1 2 2 2 0 Sec-independent protein translocase protein (TatC) Wzy_C PF04932.15 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 0.69 9.5 9.5 0.075 12.7 2.3 2.0 1 1 1 2 2 2 0 O-Antigen ligase DUF2518 PF10726.9 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 1.2 8.8 4.6 0.19 11.4 0.5 1.6 2 0 0 2 2 2 0 Protein of function (DUF2518) EphA2_TM PF14575.6 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 1.9 9.5 0.0 1.9 9.5 0.0 2.2 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Cadherin_C_2 PF16492.5 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 2.4 9.0 5.0 48 4.8 0.0 2.2 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal OAD_gamma PF04277.13 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 3.5 8.3 6.1 10 6.8 0.0 2.9 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain Phage_holin_3_6 PF07332.11 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 4.4 7.4 7.3 18 5.4 7.3 1.8 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3185 PF11381.8 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 4.9 7.3 10.5 0.1 12.6 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) FeoB_C PF07664.12 NODE_42091_length_483_cov_363.756696_g34493_i0forward_frame_3 - 5.8 6.7 7.4 1.1 9.0 0.2 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus VWA_CoxE PF05762.14 ORF98343 - 3.5e-43 147.6 0.1 3.9e-43 147.4 0.1 1.0 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 ORF98343 - 3.9e-05 24.2 0.0 8e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF98343 - 0.0022 18.3 0.0 0.0026 18.1 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain NrfD PF03916.14 ORF98343 - 0.013 15.2 0.1 0.016 14.8 0.1 1.2 1 0 0 1 1 1 0 Polysulphide reductase, NrfD Kelch_1 PF01344.25 ORF97343 - 8.1e-11 41.3 0.1 0.00031 20.2 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_6 PF13964.6 ORF97343 - 2.5e-08 33.9 1.4 0.029 14.6 0.0 3.3 2 1 0 3 3 3 3 Kelch motif Kelch_4 PF13418.6 ORF97343 - 6.3e-07 29.3 0.1 0.08 13.0 0.0 3.3 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF97343 - 1.1e-05 25.1 0.6 2.3 8.4 0.0 3.2 3 0 0 3 3 3 3 Kelch motif Kelch_5 PF13854.6 ORF97343 - 0.00021 21.2 0.1 0.91 9.6 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 ORF97343 - 0.0062 16.8 0.2 4.9 7.6 0.0 3.5 4 0 0 4 4 4 1 Galactose oxidase, central domain Aldolase PF01081.19 ORF93734 - 0.098 12.1 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 KDPG and KHG aldolase Bgal_small_N PF02929.17 ORF91281 - 2.3e-45 155.1 0.0 2.5e-45 155.0 0.0 1.0 1 0 0 1 1 1 1 Beta galactosidase small chain Herpes_UL49_2 PF04823.12 ORF91006 - 2.3 8.4 9.2 0.51 10.5 0.5 2.4 2 1 0 2 2 2 0 Herpesvirus UL49 tegument protein Filament_head PF04732.14 ORF90829 - 5.9 7.8 17.0 3.7 8.5 1.3 2.3 1 1 1 2 2 2 0 Intermediate filament head (DNA binding) region ABC2_membrane PF01061.24 ORF90358 - 2.4e-14 53.3 5.5 2.4e-14 53.3 5.5 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 ORF90358 - 0.02 14.2 1.9 0.021 14.1 1.9 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein Protein_K PF12283.8 ORF90358 - 0.081 13.2 0.1 0.15 12.3 0.1 1.5 1 0 0 1 1 1 0 Bacteriophage protein K ABC2_membrane_3 PF12698.7 ORF90358 - 9.5 5.2 16.0 32 3.5 16.0 1.8 1 1 0 1 1 1 0 ABC-2 family transporter protein Ank_2 PF12796.7 ORF90083 - 3.2e-08 34.0 0.7 1.4e-05 25.6 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF90083 - 5.4e-05 23.7 1.5 0.0026 18.3 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF90083 - 0.0041 17.4 0.4 0.99 9.8 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF90083 - 0.096 13.3 1.2 10 7.1 0.0 3.0 4 0 0 4 4 4 0 Ankyrin repeat DUF1639 PF07797.14 ORF89224 - 0.045 13.7 1.9 0.2 11.7 1.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1639) DUF1487 PF07368.11 ORF88400 - 0.11 11.9 0.9 0.15 11.5 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) CbiQ PF02361.16 ORF88400 - 0.73 9.4 4.0 0.95 9.0 4.0 1.1 1 0 0 1 1 1 0 Cobalt transport protein DUF5535 PF17687.1 ORF87465 - 0.049 13.8 0.0 0.1 12.8 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5535) zf-RVT PF13966.6 ORF8738 - 0.045 14.5 0.1 0.085 13.6 0.1 1.5 1 0 0 1 1 1 0 zinc-binding in reverse transcriptase ABC_tran PF00005.27 ORF86094 - 6.7e-17 62.3 0.0 1.1e-16 61.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF86094 - 3.5e-06 27.0 0.0 4.5e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF86094 - 4.5e-05 23.0 0.0 5.5e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF86094 - 0.013 15.7 0.2 0.29 11.4 0.2 2.4 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit CobU PF02283.16 ORF86094 - 0.028 14.0 0.0 0.035 13.7 0.0 1.2 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase TniB PF05621.11 ORF86094 - 0.052 13.0 0.0 0.074 12.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein TraS PF10624.9 ORF85447 - 0.0025 17.8 0.4 0.0037 17.2 0.4 1.3 1 0 0 1 1 1 1 Plasmid conjugative transfer entry exclusion protein TraS DUF3927 PF13064.6 ORF85447 - 0.28 11.2 2.3 1.4 8.9 1.6 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF3927) RnfC_N PF13375.6 ORF85195 - 0.22 11.5 0.0 0.34 10.9 0.0 1.3 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain Helicase_C PF00271.31 ORF85063 - 7.8e-05 23.0 0.0 0.00011 22.6 0.0 1.3 1 1 0 1 1 1 1 Helicase conserved C-terminal domain TB PF00683.17 ORF85063 - 0.032 14.0 2.9 0.039 13.7 0.8 1.9 2 0 0 2 2 2 0 TB domain TMEM100 PF16311.5 ORF85063 - 0.052 13.1 0.3 0.074 12.6 0.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 100 RRM_1 PF00076.22 ORF84516 - 1.5e-08 34.3 0.0 2.8e-08 33.5 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) COE1_DBD PF16422.5 ORF84516 - 0.059 12.8 0.0 0.081 12.4 0.0 1.1 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain DUF4140 PF13600.6 ORF84047 - 2.2 8.8 6.6 4.3 7.8 6.6 1.4 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF3552 PF12072.8 ORF84047 - 3.6 7.0 9.7 4.8 6.6 9.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Tnp_zf-ribbon_2 PF13842.6 ORF82417 - 5.1 8.0 12.6 23 5.9 0.3 4.3 3 1 1 4 4 4 0 DDE_Tnp_1-like zinc-ribbon BCMA-Tall_bind PF09257.10 ORF79375 - 1.1 9.5 5.6 2.9 8.0 0.1 3.0 3 0 0 3 3 3 0 BCMA, TALL-1 binding DUF1180 PF06679.12 ORF77849 - 3.4 8.0 4.3 3.9 7.9 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1180) Mad3_BUB1_I PF08311.12 ORF77727 - 0.036 14.1 0.1 0.063 13.3 0.1 1.4 1 0 0 1 1 1 0 Mad3/BUB1 homology region 1 FYVE PF01363.21 ORF76808 - 6.2e-14 51.9 15.0 6.2e-14 51.9 15.0 1.5 2 0 0 2 2 2 1 FYVE zinc finger OmpA PF00691.20 ORF76267 - 5e-19 68.5 0.1 7.1e-19 68.0 0.1 1.2 1 0 0 1 1 1 1 OmpA family UCH PF00443.29 ORF74086 - 1.3e-09 38.0 0.1 1.5e-09 37.8 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF74086 - 0.0001 22.0 0.0 0.00012 21.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase LacAB_rpiB PF02502.18 ORF72783 - 1.1e-50 171.2 1.9 1.3e-50 171.0 1.9 1.0 1 0 0 1 1 1 1 Ribose/Galactose Isomerase Lip_prot_lig_C PF10437.9 ORF71834 - 0.064 13.2 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus NADH_4Fe-4S PF10589.9 ORF70143 - 0.013 15.6 0.0 0.025 14.6 0.0 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABC_tran PF00005.27 ORF67133 - 4.9e-06 27.1 0.0 5.9e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter RdRP_5 PF07925.11 ORF67042 - 0.017 12.6 0.3 0.021 12.2 0.3 1.0 1 0 0 1 1 1 0 Reovirus RNA-dependent RNA polymerase lambda 3 Flavi_NS1 PF00948.21 ORF67042 - 0.071 12.0 0.5 0.099 11.5 0.5 1.2 1 0 0 1 1 1 0 Flavivirus non-structural Protein NS1 Cas_Cas1 PF01867.16 ORF65827 - 0.01 15.0 0.5 0.012 14.8 0.5 1.1 1 0 0 1 1 1 0 CRISPR associated protein Cas1 DUF3782 PF12644.7 ORF65827 - 0.24 11.6 2.5 2.4 8.4 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3782) zn-ribbon_14 PF16503.5 ORF59539 - 5.8 6.5 6.9 0.79 9.3 1.5 2.1 2 0 0 2 2 2 0 Zinc-ribbon N-Term_TEN PF11474.8 ORF58812 - 0.0046 16.6 0.4 0.0046 16.6 0.4 2.3 3 0 0 3 3 3 1 Telomerase reverse transcriptase TEN domain DUF4477 PF14780.6 ORF58812 - 0.048 13.3 0.1 0.079 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) Zot PF05707.12 ORF58812 - 0.15 11.7 0.1 0.2 11.3 0.1 1.1 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) UCH PF00443.29 ORF57100 - 3.2e-08 33.4 0.0 3.8e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Shisa PF13908.6 ORF53568 - 0.06 13.6 0.0 0.077 13.2 0.0 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator UPF0242 PF06785.11 ORF53568 - 0.68 10.0 6.0 2.9 8.0 4.7 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF2062 PF09835.9 ORF52416 - 0.19 11.6 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) ubiquitin PF00240.23 ORF5199 - 1.5e-13 50.2 0.0 2.4e-06 27.2 0.1 2.3 2 0 0 2 2 2 2 Ubiquitin family Ubiquitin_4 PF18036.1 ORF5199 - 0.0098 15.9 0.3 1.3 9.1 0.4 2.8 2 1 0 2 2 2 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 ORF5199 - 0.012 16.1 0.0 0.75 10.3 0.0 2.6 3 0 0 3 3 3 0 Ubiquitin-like domain Rad60-SLD PF11976.8 ORF5199 - 0.019 14.8 0.0 0.72 9.7 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-2 like Rad60 SUMO-like Cas_Cas1 PF01867.16 ORF51849 - 0.003 16.7 0.6 0.0034 16.6 0.6 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 TRAF_BIRC3_bd PF16673.5 ORF51849 - 0.045 13.6 0.9 0.13 12.0 0.9 1.9 1 0 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain Rpr2 PF04032.16 ORF51849 - 0.054 13.8 0.1 0.12 12.7 0.1 1.6 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain NYD-SP28 PF14772.6 ORF51849 - 0.16 12.0 7.0 0.12 12.4 5.7 1.6 1 1 0 1 1 1 0 Sperm tail B9-C2 PF07162.11 ORF51381 - 0.12 12.5 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Ciliary basal body-associated, B9 protein p450 PF00067.22 ORF51280 - 8.5e-30 103.9 0.0 9.2e-30 103.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF4113 PF13438.6 ORF50796 - 2.5e-22 78.7 0.2 5.7e-22 77.5 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4113) IMS_C PF11799.8 ORF50796 - 9.3e-11 42.5 0.0 1.3e-10 42.0 0.0 1.2 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain MaoC_dehydrat_N PF13452.6 ORF48923 - 0.2 11.8 0.0 0.28 11.3 0.0 1.1 1 0 0 1 1 1 0 N-terminal half of MaoC dehydratase Prok-RING_2 PF14445.6 ORF48235 - 0.15 12.3 3.7 0.19 11.9 0.4 2.6 2 1 1 3 3 3 0 Prokaryotic RING finger family 2 Laminin_B PF00052.18 ORF48076 - 0.00069 19.5 0.0 0.0011 18.9 0.0 1.3 1 0 0 1 1 1 1 Laminin B (Domain IV) Arch_fla_DE PF04659.13 ORF48076 - 0.1 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Archaeal flagella protein Ribosomal_S17 PF00366.20 ORF47641 - 5.7e-25 87.2 0.1 1.2e-24 86.2 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 ORF47641 - 7.9e-25 87.0 1.2 1.4e-24 86.3 1.2 1.4 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal Carla_C4 PF01623.17 ORF47641 - 0.049 13.6 0.4 0.076 13.0 0.4 1.4 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein HemY_N PF07219.13 ORF46397 - 0.051 13.8 0.3 0.13 12.5 0.1 1.7 2 0 0 2 2 2 0 HemY protein N-terminus N_methyl PF07963.12 ORF46397 - 0.39 10.4 4.2 0.57 9.8 0.3 2.7 3 0 0 3 3 3 0 Prokaryotic N-terminal methylation motif NAF PF03822.14 ORF45933 - 0.032 14.4 1.3 1.1 9.5 0.1 3.0 2 1 1 3 3 3 0 NAF domain adh_short PF00106.25 ORF45844 - 1.4e-23 83.3 0.0 1.9e-23 83.0 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF45844 - 6.3e-14 52.1 0.0 7.7e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF45844 - 0.0028 17.6 0.0 0.0052 16.7 0.0 1.5 1 1 0 1 1 1 1 KR domain Pkinase PF00069.25 ORF44204 - 9.4e-17 61.2 1.7 2.6e-16 59.8 1.7 1.6 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44204 - 4.8e-12 45.7 0.8 5.1e-12 45.6 0.8 1.2 1 1 0 1 1 1 1 Protein tyrosine kinase CRT-like PF08627.10 ORF43968 - 0.00085 18.4 1.2 0.0011 18.0 1.2 1.2 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like Gaa1 PF04114.14 ORF43830 - 0.17 10.8 2.6 0.2 10.7 2.6 1.1 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component cEGF PF12662.7 ORF42562 - 0.071 13.1 3.3 0.12 12.4 1.1 2.2 2 0 0 2 2 2 0 Complement Clr-like EGF-like DUF533 PF04391.12 ORF42176 - 0.045 13.3 1.5 0.054 13.1 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF533) DUF4345 PF14248.6 ORF41574 - 0.11 12.4 4.4 0.24 11.3 2.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4345) CBFB_NFYA PF02045.15 ORF41373 - 2.5e-10 40.8 6.7 2.5e-10 40.8 6.7 1.8 2 0 0 2 2 2 1 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B DDHD PF02862.17 ORF41373 - 0.023 14.9 7.7 0.027 14.6 7.7 1.1 1 0 0 1 1 1 0 DDHD domain CCT PF06203.14 ORF41373 - 0.06 13.4 6.3 0.12 12.5 6.3 1.4 1 0 0 1 1 1 0 CCT motif ALMT PF11744.8 ORF41373 - 0.13 11.1 8.8 0.13 11.1 8.8 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter NPR1_interact PF15699.5 ORF41373 - 2 9.0 12.8 4.5 7.9 12.8 1.6 1 1 0 1 1 1 0 NPR1 interacting Gaa1 PF04114.14 ORF41068 - 0.17 10.8 2.6 0.2 10.7 2.6 1.1 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component Cpn60_TCP1 PF00118.24 ORF38322 - 1.9e-28 99.4 0.7 2.1e-28 99.2 0.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF2870 PF11069.8 ORF38322 - 0.15 12.5 0.0 0.23 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2870) DUF4820 PF16091.5 ORF36331 - 0.037 13.4 6.4 0.049 13.0 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) zf-RVT PF13966.6 ORF33739 - 0.045 14.5 0.1 0.085 13.6 0.1 1.5 1 0 0 1 1 1 0 zinc-binding in reverse transcriptase Abhydrolase_2 PF02230.16 ORF33039 - 1e-08 35.3 0.0 1.2e-08 35.1 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_5 PF12695.7 ORF33039 - 0.0036 17.1 0.0 0.0045 16.8 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.7 ORF33039 - 0.2 12.2 1.1 0.27 11.8 1.1 1.3 1 1 0 1 1 1 0 Alpha/beta hydrolase family Ank_5 PF13857.6 ORF31841 - 2.7e-13 49.8 0.0 4.5e-05 23.7 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF31841 - 1.9e-12 47.6 0.0 1.1e-05 25.9 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF31841 - 1e-09 37.8 0.0 0.4 11.4 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF31841 - 3.1e-09 37.2 0.0 0.0003 21.3 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF31841 - 5.3e-08 33.0 0.0 0.037 14.5 0.0 4.0 4 0 0 4 4 4 3 Ankyrin repeat Pkinase PF00069.25 ORF27628 - 6.7e-17 61.7 1.3 1.9e-16 60.3 1.3 1.6 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF27628 - 4.9e-12 45.7 0.7 5.1e-12 45.6 0.7 1.2 1 1 0 1 1 1 1 Protein tyrosine kinase MORN PF02493.20 ORF23338 - 4.7e-09 35.6 27.6 0.002 17.9 3.0 5.1 5 0 0 5 5 5 3 MORN repeat Gaa1 PF04114.14 ORF23312 - 0.17 10.8 2.6 0.2 10.7 2.6 1.1 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component Nucleo_P87 PF07267.11 ORF21937 - 0.0073 15.2 0.2 0.0079 15.1 0.2 1.0 1 0 0 1 1 1 1 Nucleopolyhedrovirus capsid protein P87 DUF3730 PF12530.8 ORF21937 - 0.035 13.7 0.0 0.041 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3730) KH_7 PF17214.3 ORF21937 - 0.17 11.9 0.1 0.27 11.2 0.1 1.3 1 0 0 1 1 1 0 KH domain bZIP_1 PF00170.21 ORF21609 - 8.4e-07 29.0 8.4 2.3e-06 27.6 8.4 1.7 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF21609 - 8.2e-05 22.6 8.0 8.2e-05 22.6 8.0 1.8 2 1 0 2 2 2 1 Basic region leucine zipper RusA PF05866.11 ORF21609 - 0.26 11.9 4.8 0.34 11.5 4.8 1.2 1 0 0 1 1 1 0 Endodeoxyribonuclease RusA BRI3BP PF14965.6 ORF21609 - 0.3 10.6 0.4 0.56 9.7 0.4 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 FapA PF03961.13 ORF21609 - 0.39 9.3 6.6 0.49 8.9 6.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Rpr2 PF04032.16 ORF2100 - 0.11 12.8 0.1 0.24 11.7 0.1 1.6 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DrrA_P4M PF14860.6 ORF2100 - 0.25 11.2 8.1 2.8 7.9 1.8 2.3 1 1 1 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain Mt_ATP-synt_B PF05405.14 ORF2100 - 0.58 9.8 6.7 1.5 8.4 6.6 1.8 1 1 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF1645 PF07816.11 ORF20716 - 0.62 10.6 2.9 0.76 10.3 2.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1645) Coq4 PF05019.13 ORF19919 - 0.18 11.1 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 LmjF365940-deam PF14421.6 ORF18980 - 7.4e-26 91.0 0.7 1.4e-17 64.0 0.1 2.1 1 1 1 2 2 2 2 A distinct subfamily of CDD/CDA-like deaminases dCMP_cyt_deam_1 PF00383.23 ORF18980 - 0.00025 20.9 0.1 0.00035 20.4 0.1 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region DUF553 PF04473.12 ORF18608 - 0.69 9.4 6.3 0.093 12.3 1.2 1.8 1 1 1 2 2 2 0 Transglutaminase-like domain RNA_pol_Rpb5_C PF01191.19 ORF18460 - 0.053 13.4 0.0 0.084 12.8 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb5, C-terminal domain BUD22 PF09073.10 ORF17730 - 0.00057 19.4 33.6 0.00067 19.1 33.6 1.0 1 0 0 1 1 1 1 BUD22 Nop14 PF04147.12 ORF17730 - 4.6 5.3 41.4 5.8 5.0 41.4 1.0 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 ORF17730 - 5.2 6.4 38.9 7.8 5.8 38.9 1.2 1 0 0 1 1 1 0 SDA1 KH_dom-like PF14714.6 ORF15523 - 4.6e-27 94.2 0.5 4.9e-26 90.9 0.1 2.0 2 0 0 2 2 2 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Polyketide_cyc PF03364.20 ORF152759 - 9.9e-06 25.8 0.0 1.2e-05 25.5 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Cnn_1N PF07989.11 ORF152603 - 0.031 14.4 20.4 0.15 12.2 10.8 2.9 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 AAA_23 PF13476.6 ORF152603 - 0.6 10.6 17.7 0.71 10.3 17.7 1.1 1 0 0 1 1 1 0 AAA domain bZIP_1 PF00170.21 ORF152603 - 0.72 10.0 22.1 0.51 10.5 5.3 3.4 2 1 1 3 3 3 0 bZIP transcription factor bZIP_2 PF07716.15 ORF152603 - 2.9 8.1 22.8 0.35 11.0 5.6 3.4 3 0 0 3 3 3 0 Basic region leucine zipper Mt_ATP-synt_D PF05873.12 ORF152603 - 3.9 7.3 11.8 2.7 7.8 1.5 2.2 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) DUF4407 PF14362.6 ORF152603 - 5.7 6.2 7.9 7.2 5.9 7.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HTH_19 PF12844.7 ORF152229 - 0.0013 18.7 0.0 0.0027 17.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 ORF152229 - 0.0028 18.0 0.0 0.0041 17.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 ORF152229 - 0.032 14.1 0.0 0.056 13.3 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_3 PF01381.22 ORF152229 - 0.047 13.8 0.0 0.1 12.7 0.0 1.6 1 1 0 1 1 1 0 Helix-turn-helix HTH_37 PF13744.6 ORF152229 - 0.09 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain adh_short PF00106.25 ORF151525 - 3.8e-29 101.5 0.0 4.6e-29 101.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF151525 - 1.5e-21 77.1 0.0 4.7e-21 75.4 0.0 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF151525 - 0.03 14.2 0.1 0.038 13.9 0.1 1.1 1 0 0 1 1 1 0 KR domain DUF1776 PF08643.10 ORF151525 - 0.087 12.2 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) YwiC PF14256.6 ORF150164 - 2.9 8.2 14.3 0.2 12.0 0.9 2.2 1 1 1 2 2 2 0 YwiC-like protein bZIP_1 PF00170.21 ORF146392 - 8.4e-07 29.0 8.4 2.3e-06 27.6 8.4 1.7 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF146392 - 8.2e-05 22.6 8.0 8.2e-05 22.6 8.0 1.8 2 1 0 2 2 2 1 Basic region leucine zipper RusA PF05866.11 ORF146392 - 0.26 11.9 4.8 0.34 11.5 4.8 1.2 1 0 0 1 1 1 0 Endodeoxyribonuclease RusA BRI3BP PF14965.6 ORF146392 - 0.3 10.6 0.4 0.56 9.7 0.4 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 FapA PF03961.13 ORF146392 - 0.39 9.3 6.6 0.49 8.9 6.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Lipoprotein_19 PF13617.6 ORF145869 - 3.7 7.4 4.7 0.56 10.0 0.5 1.7 2 0 0 2 2 2 0 YnbE-like lipoprotein Aldedh PF00171.22 ORF145193 - 6.3e-37 127.2 0.1 7e-37 127.0 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Swi3 PF07962.12 ORF144489 - 0.15 12.1 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Replication Fork Protection Component Swi3 zf-RVT PF13966.6 ORF140961 - 0.045 14.5 0.1 0.085 13.6 0.1 1.5 1 0 0 1 1 1 0 zinc-binding in reverse transcriptase UCH PF00443.29 ORF140795 - 1.3e-09 38.0 0.1 1.5e-09 37.8 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF140795 - 0.0001 22.0 0.0 0.00012 21.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Glycos_transf_1 PF00534.20 ORF140787 - 7.7e-18 64.6 0.0 9.5e-18 64.3 0.0 1.2 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF140787 - 8.2e-12 45.7 0.0 1.2e-11 45.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 ATP12 PF07542.11 ORF140479 - 0.00019 21.5 0.2 0.00037 20.6 0.2 1.5 1 0 0 1 1 1 1 ATP12 chaperone protein Acetyltransf_6 PF13480.7 ORF140479 - 0.037 14.2 0.2 0.055 13.6 0.2 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain TC1 PF15063.6 ORF137664 - 0.053 13.4 0.1 0.098 12.5 0.1 1.4 1 0 0 1 1 1 0 Thyroid cancer protein 1 Pro_3_hydrox_C PF05373.11 ORF137664 - 0.075 13.1 0.2 0.15 12.2 0.2 1.6 1 1 0 1 1 1 0 L-proline 3-hydroxylase, C-terminal Reo_sigmaC PF04582.12 ORF137609 - 0.057 13.7 0.0 0.094 13.0 0.0 1.4 1 0 0 1 1 1 0 Reovirus sigma C capsid protein C-terminal domain ZapA PF05164.13 ORF136807 - 1.5e-19 70.2 1.5 2e-19 69.8 1.5 1.2 1 0 0 1 1 1 1 Cell division protein ZapA DUF3482 PF11981.8 ORF136807 - 0.0023 17.4 4.4 0.003 17.0 4.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) Bac_rhamnosid6H PF17389.2 ORF136807 - 0.045 13.0 0.2 0.053 12.8 0.2 1.1 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DUF5320 PF17253.2 ORF136807 - 0.22 12.6 0.6 22 6.2 0.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) PEP-utilisers_N PF05524.13 ORF136807 - 0.26 11.5 3.3 0.47 10.7 3.3 1.4 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal DUF2205 PF10224.9 ORF136807 - 0.43 10.6 3.5 2.9 7.9 0.1 2.2 2 0 0 2 2 2 0 Short coiled-coil protein Cys_rich_KTR PF14205.6 ORF135844 - 0.0056 16.4 0.6 0.012 15.4 0.6 1.5 1 0 0 1 1 1 1 Cysteine-rich KTR ASFV_J13L PF05568.11 ORF132530 - 1.4 8.6 3.6 2 8.1 3.6 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Glycos_transf_1 PF00534.20 ORF130729 - 7.7e-18 64.6 0.0 9.5e-18 64.3 0.0 1.2 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF130729 - 8.2e-12 45.7 0.0 1.2e-11 45.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Conotoxin_I2 PF17557.2 ORF126001 - 6.5 7.0 22.9 1.1 9.4 13.2 2.9 2 0 0 2 2 2 0 I2-superfamily conotoxins NYD-SP28 PF14772.6 ORF125648 - 0.00083 19.4 3.4 0.0011 18.9 2.9 1.5 1 1 0 1 1 1 1 Sperm tail PHD_like PF12910.7 ORF125648 - 0.01 15.8 0.1 0.016 15.2 0.1 1.4 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system Cas_Cas1 PF01867.16 ORF125648 - 0.062 12.4 1.2 0.077 12.1 1.2 1.1 1 0 0 1 1 1 0 CRISPR associated protein Cas1 Mt_ATP-synt_B PF05405.14 ORF125648 - 0.11 12.1 4.9 0.16 11.6 4.9 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF1700 PF08006.11 ORF125648 - 0.69 9.4 2.6 0.79 9.2 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) ATP-synt_C PF00137.21 ORF125317 - 3.4e-17 62.5 6.8 3.4e-17 62.5 6.8 2.0 2 1 0 2 2 2 1 ATP synthase subunit C RNA_pol_Rpc82 PF05645.13 ORF124488 - 0.021 14.6 5.8 0.025 14.3 5.8 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 Vfa1 PF08432.10 ORF124488 - 0.046 14.0 11.5 0.059 13.7 11.5 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Pex14_N PF04695.13 ORF124488 - 0.088 13.5 2.8 0.12 13.1 2.8 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Ribosomal_L12_N PF16320.5 ORF124488 - 0.11 12.3 1.9 0.18 11.6 1.9 1.3 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain Ntox28 PF15605.6 ORF12121 - 0.036 14.3 0.0 0.036 14.3 0.0 2.3 1 1 2 3 3 3 0 Bacterial toxin 28 DUF3216 PF11505.8 ORF12121 - 0.17 12.1 3.2 0.81 9.9 3.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3216) AAA_11 PF13086.6 ORF12121 - 0.18 11.6 7.7 0.23 11.2 7.7 1.2 1 0 0 1 1 1 0 AAA domain Reo_sigmaC PF04582.12 ORF12097 - 0.057 13.7 0.0 0.094 13.0 0.0 1.4 1 0 0 1 1 1 0 Reovirus sigma C capsid protein C-terminal domain DUF779 PF05610.11 ORF120782 - 0.47 10.7 1.4 0.51 10.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF779) Hist_deacetyl PF00850.19 ORF119442 - 1.3e-17 64.2 0.0 1.6e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain RNA_pol_Rpc82 PF05645.13 ORF118952 - 0.021 14.6 5.8 0.025 14.3 5.8 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 Vfa1 PF08432.10 ORF118952 - 0.046 14.0 11.5 0.059 13.7 11.5 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Pex14_N PF04695.13 ORF118952 - 0.088 13.5 2.8 0.12 13.1 2.8 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Ribosomal_L12_N PF16320.5 ORF118952 - 0.11 12.3 1.9 0.18 11.6 1.9 1.3 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain CarbpepA_inh PF02977.15 ORF116687 - 0.012 15.4 0.0 0.076 12.8 0.0 2.0 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor SAM_2 PF07647.17 ORF1146 - 0.0069 16.5 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Kinase-PolyVal PF18762.1 ORF1146 - 0.087 12.8 1.2 0.098 12.6 0.1 1.6 2 0 0 2 2 2 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins SAM_1 PF00536.30 ORF1146 - 0.1 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) UQ_con PF00179.26 ORF114428 - 1.7e-39 134.7 0.1 1.9e-39 134.5 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme SAM_2 PF07647.17 ORF112953 - 0.0069 16.5 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Kinase-PolyVal PF18762.1 ORF112953 - 0.087 12.8 1.2 0.098 12.6 0.1 1.6 2 0 0 2 2 2 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins SAM_1 PF00536.30 ORF112953 - 0.1 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Reo_sigmaC PF04582.12 ORF109808 - 0.057 13.7 0.0 0.094 13.0 0.0 1.4 1 0 0 1 1 1 0 Reovirus sigma C capsid protein C-terminal domain VPS13 PF16908.5 ORF108828 - 0.064 13.0 0.1 0.077 12.8 0.1 1.3 1 0 0 1 1 1 0 Vacuolar sorting-associated protein 13, N-terminal CENP-M PF11111.8 ORF108828 - 0.14 11.3 0.1 0.2 10.8 0.1 1.2 1 0 0 1 1 1 0 Centromere protein M (CENP-M) Skp1 PF01466.19 ORF105461 - 2.7e-26 91.4 2.6 5.5e-26 90.4 2.6 1.6 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 ORF105461 - 5.6e-19 68.1 1.5 1.1e-18 67.2 1.5 1.5 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain XOO_2897-deam PF14440.6 ORF105197 - 0.15 12.1 0.1 0.24 11.5 0.1 1.3 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase Defensin_5 PF18251.1 ORF104884 - 0.029 14.5 1.7 7.9 6.7 0.2 2.5 2 0 0 2 2 2 0 Fungal defensin Copsin Phage_CRI PF05144.14 ORF102131 - 0.11 11.8 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 Phage replication protein CRI adh_short PF00106.25 ORF100892 - 1.4e-23 83.3 0.0 1.9e-23 83.0 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF100892 - 6.3e-14 52.1 0.0 7.7e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF100892 - 0.0028 17.6 0.0 0.0052 16.7 0.0 1.5 1 1 0 1 1 1 1 KR domain CytB6-F_Fe-S PF08802.10 ORF100264 - 1.2 9.2 4.2 0.5 10.4 0.3 2.3 2 1 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit Vel1p PF10339.9 NODE_42634_length_475_cov_2.075000_g35011_i0reverse_frame_1 - 0.057 12.8 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Yeast-specific zinc responsive TCR PF03638.15 NODE_42627_length_475_cov_3.015909_g35004_i0forward_frame_1 - 1.9e-13 50.5 22.6 3.2e-13 49.8 22.6 1.4 1 0 0 1 1 1 1 Tesmin/TSO1-like CXC domain, cysteine-rich domain preSET_CXC PF18264.1 NODE_42627_length_475_cov_3.015909_g35004_i0forward_frame_1 - 1.9 9.1 19.2 3.7 8.1 19.2 1.5 1 0 0 1 1 1 0 CXC domain DUF4560 PF15118.6 NODE_42625_length_475_cov_3.538636_g35002_i0forward_frame_1 - 0.0016 18.3 0.1 0.0029 17.5 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4560) LysR_substrate PF03466.20 NODE_42624_length_475_cov_3.547727_g35001_i0reverse_frame_1 - 1.2e-06 28.1 0.0 1.3e-06 27.9 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain YlqD PF11068.8 NODE_42613_length_475_cov_74.475000_g34990_i0reverse_frame_1 - 0.05 14.0 5.0 0.14 12.5 2.5 2.0 1 1 1 2 2 2 0 YlqD protein SVM_signal PF12113.8 NODE_42613_length_475_cov_74.475000_g34990_i0forward_frame_1 - 0.19 11.7 0.5 0.19 11.7 0.5 2.5 2 0 0 2 2 2 0 SVM protein signal sequence Cadherin_tail PF15974.5 NODE_42612_length_475_cov_78.727273_g34989_i0forward_frame_1 - 0.0082 16.5 0.1 0.013 15.8 0.1 1.3 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region DUF4893 PF16233.5 NODE_42603_length_475_cov_122.236364_g34980_i0reverse_frame_1 - 0.16 11.6 1.1 8 6.0 0.0 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4893) Phage_NinH PF06322.11 NODE_42603_length_475_cov_122.236364_g34980_i0forward_frame_1 - 0.094 12.6 0.2 13 5.8 0.1 2.3 2 0 0 2 2 2 0 Phage NinH protein zf-C2H2_11 PF16622.5 NODE_42592_length_475_cov_306.809091_g34969_i1forward_frame_1 - 0.25 11.1 1.5 0.58 10.0 1.5 1.6 1 0 0 1 1 1 0 zinc-finger C2H2-type zf-C2H2_11 PF16622.5 NODE_42591_length_475_cov_312.420455_g34969_i0forward_frame_1 - 0.25 11.1 1.5 0.58 10.0 1.5 1.6 1 0 0 1 1 1 0 zinc-finger C2H2-type # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks157.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks157.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks157.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks157.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LRR_6 PF13516.6 NODE_42573_length_476_cov_2.174603_g34955_i0reverse_frame_1 - 6.5e-13 47.6 6.8 0.0075 16.2 0.0 4.5 4 0 0 4 4 4 4 Leucine Rich repeat LRR_4 PF12799.7 NODE_42573_length_476_cov_2.174603_g34955_i0reverse_frame_1 - 3.2e-07 30.6 13.9 0.0013 19.1 3.7 2.8 2 1 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_42573_length_476_cov_2.174603_g34955_i0reverse_frame_1 - 0.00017 21.7 9.3 2.4 9.0 0.1 4.5 4 0 0 4 4 4 2 Leucine Rich Repeat LRR_8 PF13855.6 NODE_42573_length_476_cov_2.174603_g34955_i0reverse_frame_1 - 0.026 14.3 15.4 0.13 12.1 2.2 3.6 2 2 0 2 2 2 0 Leucine rich repeat DUF1631 PF07793.11 NODE_42565_length_476_cov_2.825397_g34947_i0reverse_frame_1 - 0.19 10.1 1.1 0.23 9.8 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) CDC27 PF09507.10 NODE_42565_length_476_cov_2.825397_g34947_i0reverse_frame_1 - 2.4 7.5 18.5 2.7 7.3 18.5 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 DUF4118 PF13493.6 NODE_42559_length_476_cov_71.716553_g34941_i0reverse_frame_1 - 1.1 9.1 6.0 2 8.3 6.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4118) MetJ PF01340.20 NODE_42539_length_476_cov_178.176871_g34921_i0reverse_frame_1 - 0.15 12.1 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Met Apo-repressor, MetJ Imm70 PF15601.6 NODE_42511_length_477_cov_2.323529_g34897_i0reverse_frame_1 - 0.13 11.8 0.1 0.27 10.8 0.0 1.5 1 1 1 2 2 2 0 Immunity protein 70 MatE PF01554.18 NODE_42510_length_477_cov_2.323529_g34896_i0reverse_frame_1 - 1.6e-12 47.4 1.0 1.6e-12 47.4 1.0 2.3 3 0 0 3 3 3 1 MatE Polysacc_synt_C PF14667.6 NODE_42510_length_477_cov_2.323529_g34896_i0reverse_frame_1 - 0.00043 20.4 9.4 0.00096 19.2 9.4 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain EAL PF00563.20 NODE_42503_length_477_cov_3.619910_g34889_i0reverse_frame_1 - 4.6e-37 127.8 0.2 5e-37 127.7 0.2 1.0 1 0 0 1 1 1 1 EAL domain Phospholip_A2_3 PF09056.11 NODE_42503_length_477_cov_3.619910_g34889_i0reverse_frame_1 - 0.15 12.7 0.0 0.22 12.2 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic phospholipase A2 UPF0564 PF10595.9 NODE_42500_length_477_cov_4.357466_g34886_i0reverse_frame_1 - 2.2e-07 30.3 12.8 2.9e-07 29.9 12.8 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0564 SNX17_FERM_C PF18116.1 NODE_42500_length_477_cov_4.357466_g34886_i0reverse_frame_1 - 0.8 9.8 4.1 0.53 10.4 1.1 1.9 2 0 0 2 2 2 0 Sorting Nexin 17 FERM C-terminal domain Na_H_antiport_1 PF06965.12 NODE_42483_length_477_cov_77.131222_g34869_i0forward_frame_1 - 4.5e-17 62.0 4.1 5.3e-17 61.7 4.1 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 DUF2724 PF10893.8 NODE_42479_length_477_cov_87.520362_g34865_i0forward_frame_1 - 0.014 15.2 2.3 0.033 14.0 2.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2724) DDE_5 PF13546.6 NODE_42475_length_477_cov_101.572398_g34861_i0reverse_frame_1 - 0.064 12.6 0.7 0.074 12.4 0.7 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease PSP94 PF05825.11 NODE_42470_length_477_cov_114.570136_g34856_i0reverse_frame_1 - 0.044 14.3 0.4 0.075 13.6 0.4 1.4 1 0 0 1 1 1 0 Beta-microseminoprotein (PSP-94) Fer4_22 PF17179.4 NODE_42464_length_477_cov_138.651584_g34850_i0forward_frame_1 - 0.035 15.0 6.5 0.052 14.4 6.5 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain CRAL_TRIO PF00650.20 NODE_42463_length_477_cov_159.497738_g34849_i0forward_frame_1 - 6.7e-15 55.1 0.9 8.2e-15 54.9 0.9 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 NODE_42463_length_477_cov_159.497738_g34849_i0forward_frame_1 - 0.0074 16.5 0.2 0.0095 16.1 0.2 1.2 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain ATG19_autophagy PF12744.7 NODE_42462_length_477_cov_179.710407_g34848_i0reverse_frame_1 - 0.16 11.1 0.0 0.18 11.0 0.0 1.1 1 0 0 1 1 1 0 Autophagy protein Atg19, Atg8-binding SAF PF08666.12 NODE_42455_length_477_cov_297.475113_g34841_i0reverse_frame_1 - 0.0011 19.5 0.0 1.3 9.7 0.0 2.2 2 0 0 2 2 2 2 SAF domain DUF3810 PF12725.7 NODE_42446_length_477_cov_4979.380090_g34833_i0forward_frame_1 - 0.32 10.3 2.5 0.56 9.5 2.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Ras PF00071.22 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 1.3e-54 184.2 0.4 1.4e-54 184.0 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 4.2e-36 123.8 0.3 5.1e-36 123.5 0.3 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 3.3e-17 62.5 0.2 3.9e-17 62.2 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 3.1e-08 33.7 0.2 3.9e-08 33.4 0.2 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 1.3e-05 24.7 0.1 1.6e-05 24.4 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.00039 19.9 0.0 0.00052 19.5 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.00099 18.7 0.3 0.0021 17.6 0.1 1.5 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.001 19.0 1.0 0.013 15.4 0.2 2.2 1 1 1 2 2 2 1 RsgA GTPase FeoB_N PF02421.18 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.0095 15.5 0.0 0.016 14.7 0.0 1.4 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_16 PF13191.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.015 15.7 0.1 0.018 15.4 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.015 15.0 0.0 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.019 15.0 0.0 0.04 13.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.021 14.5 0.4 0.05 13.3 0.4 1.8 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.049 13.9 0.0 0.36 11.1 0.0 2.0 1 1 1 2 2 2 0 AAA domain ABC_tran PF00005.27 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.066 13.7 0.4 0.094 13.2 0.4 1.5 1 1 0 1 1 1 0 ABC transporter PduV-EutP PF10662.9 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.076 12.8 0.1 0.57 9.9 0.0 1.9 1 1 1 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_25 PF13481.6 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.11 12.0 0.0 0.14 11.7 0.0 1.3 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_1 - 0.12 12.8 0.0 0.18 12.2 0.0 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF4752 PF15944.5 NODE_42435_length_478_cov_2.905192_g34823_i0reverse_frame_3 - 0.12 12.5 0.1 0.26 11.3 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) FAA_hydro_N_2 PF18288.1 NODE_42435_length_478_cov_2.905192_g34823_i0reverse_frame_2 - 0.031 14.7 0.0 0.24 11.9 0.0 2.1 1 1 0 1 1 1 0 Fumarylacetoacetase N-terminal domain 2 MFS_4 PF06779.14 NODE_42435_length_478_cov_2.905192_g34823_i0forward_frame_3 - 1e-52 179.6 10.4 1.1e-52 179.5 10.4 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1 PF07690.16 NODE_42435_length_478_cov_2.905192_g34823_i0forward_frame_3 - 9.7e-07 28.0 13.5 1.4e-06 27.5 13.5 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily PHD_3 PF13922.6 NODE_42435_length_478_cov_2.905192_g34823_i0forward_frame_2 - 0.16 12.4 0.5 0.32 11.4 0.5 1.5 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx DUF1615 PF07759.12 NODE_42431_length_478_cov_3.711061_g34819_i0forward_frame_2 - 4.5e-37 128.0 0.1 5.4e-37 127.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1615) LPAM_1 PF08139.12 NODE_42431_length_478_cov_3.711061_g34819_i0forward_frame_2 - 2.1 9.0 4.5 4.2 8.0 4.5 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF3876 PF12992.7 NODE_42424_length_478_cov_64.232506_g34812_i0reverse_frame_3 - 0.046 13.8 0.3 0.081 13.0 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3876) DUF5568 PF17724.1 NODE_42424_length_478_cov_64.232506_g34812_i0reverse_frame_3 - 4.8 7.0 10.7 0.66 9.8 6.8 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5568) HA2 PF04408.23 NODE_42424_length_478_cov_64.232506_g34812_i0reverse_frame_2 - 0.065 13.5 0.1 0.1 12.9 0.1 1.2 1 0 0 1 1 1 0 Helicase associated domain (HA2) CtsR PF05848.11 NODE_42409_length_478_cov_165.291196_g34797_i0forward_frame_2 - 0.0072 16.2 0.6 4.4 7.3 0.0 2.6 3 0 0 3 3 3 2 CtsR N-terminal HTH domain DUF4501 PF14946.6 NODE_42406_length_478_cov_211.634312_g34794_i0forward_frame_2 - 3.3 7.7 7.7 0.94 9.5 2.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4501) Virulence_RhuM PF13310.6 NODE_42400_length_479_cov_1.036036_g34790_i0forward_frame_3 - 0.044 13.0 0.1 0.058 12.6 0.1 1.2 1 0 0 1 1 1 0 Virulence protein RhuM family zf-C2H2_3rep PF18868.1 NODE_42400_length_479_cov_1.036036_g34790_i0forward_frame_3 - 0.087 13.5 0.4 1.2 9.9 0.2 2.0 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats PAS_5 PF07310.13 NODE_42392_length_479_cov_2.736486_g34782_i0forward_frame_2 - 0.15 11.9 0.3 0.22 11.3 0.3 1.2 1 0 0 1 1 1 0 PAS domain HNH_2 PF13391.6 NODE_42386_length_479_cov_6.137387_g34776_i0reverse_frame_3 - 0.042 14.0 0.8 0.066 13.4 0.8 1.4 1 1 0 1 1 1 0 HNH endonuclease DUF1206 PF06724.11 NODE_42386_length_479_cov_6.137387_g34776_i0forward_frame_2 - 0.22 11.6 2.6 0.4 10.8 2.6 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) Med11 PF10280.9 NODE_42385_length_479_cov_8.711712_g34775_i0forward_frame_3 - 0.078 13.4 0.5 0.094 13.2 0.5 1.3 1 1 0 1 1 1 0 Mediator complex protein Gsf2 PF11055.8 NODE_42376_length_479_cov_72.376126_g34766_i0reverse_frame_3 - 0.0028 16.5 0.6 0.0033 16.2 0.6 1.1 1 0 0 1 1 1 1 Glucose signalling factor 2 Toxin_4 PF00706.17 NODE_42366_length_479_cov_92.536036_g34756_i0reverse_frame_3 - 0.07 13.6 0.3 0.47 10.9 0.1 2.1 2 0 0 2 2 2 0 Anenome neurotoxin DUF975 PF06161.11 NODE_42359_length_479_cov_102.493243_g34749_i0reverse_frame_2 - 1.8 8.3 13.1 2.1 8.1 13.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF975) Adenine_glyco PF03352.13 NODE_42357_length_479_cov_113.045045_g34747_i0reverse_frame_3 - 8.4e-34 116.9 0.0 1.1e-33 116.5 0.0 1.1 1 0 0 1 1 1 1 Methyladenine glycosylase CBM_10 PF02013.16 NODE_42352_length_479_cov_123.159910_g34182_i1forward_frame_2 - 3.3 8.3 4.9 56 4.3 0.1 3.3 4 0 0 4 4 4 0 Cellulose or protein binding domain IFT57 PF10498.9 NODE_42350_length_479_cov_128.191441_g34741_i0forward_frame_3 - 0.039 12.9 0.9 0.049 12.6 0.9 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Med4 PF10018.9 NODE_42350_length_479_cov_128.191441_g34741_i0forward_frame_3 - 0.59 9.8 4.5 1.3 8.7 3.7 1.8 2 1 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF1980 PF09323.10 NODE_42346_length_479_cov_167.385135_g34737_i0forward_frame_3 - 0.057 13.3 0.3 0.31 10.9 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) 2-Hacid_dh_C PF02826.19 NODE_42343_length_479_cov_188.941441_g34734_i0reverse_frame_3 - 9.2e-26 90.3 0.0 1.1e-25 90.0 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Cortex-I_coil PF09304.10 NODE_42340_length_479_cov_231.952703_g34731_i0reverse_frame_3 - 0.0046 17.1 1.1 2.9 8.1 0.2 2.2 2 0 0 2 2 2 2 Cortexillin I, coiled coil Exo5 PF09810.9 NODE_42340_length_479_cov_231.952703_g34731_i0reverse_frame_3 - 0.009 15.5 4.1 0.01 15.4 4.1 1.0 1 0 0 1 1 1 1 Exonuclease V - a 5' deoxyribonuclease DNA_ligase_A_C PF04679.15 NODE_42340_length_479_cov_231.952703_g34731_i0reverse_frame_2 - 1.1e-22 80.4 0.0 1.6e-22 79.9 0.0 1.2 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region DNA_ligase_OB_2 PF14743.6 NODE_42340_length_479_cov_231.952703_g34731_i0reverse_frame_2 - 0.032 14.2 0.0 3.8 7.6 0.0 2.3 2 0 0 2 2 2 0 DNA ligase OB-like domain RAD51_interact PF15696.5 NODE_42338_length_479_cov_351.425676_g34729_i0reverse_frame_3 - 0.0098 16.0 0.3 0.024 14.7 0.3 1.7 1 0 0 1 1 1 1 RAD51 interacting motif zf-Tim10_DDP PF02953.15 NODE_42338_length_479_cov_351.425676_g34729_i0reverse_frame_2 - 5.8e-16 57.9 3.2 1.2e-15 56.9 3.2 1.5 1 0 0 1 1 1 1 Tim10/DDP family zinc finger DUF842 PF05811.13 NODE_42338_length_479_cov_351.425676_g34729_i0reverse_frame_2 - 0.0018 18.0 3.3 0.0022 17.7 3.3 1.2 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF842) PFL-like PF02901.15 NODE_42338_length_479_cov_351.425676_g34729_i0reverse_frame_2 - 0.032 12.9 0.2 0.039 12.6 0.2 1.0 1 0 0 1 1 1 0 Pyruvate formate lyase-like PARM PF17061.5 NODE_42319_length_480_cov_1.806742_g34714_i0reverse_frame_2 - 2 8.5 3.1 3.2 7.8 3.1 1.2 1 0 0 1 1 1 0 PARM Phage_term_smal PF05944.12 NODE_42316_length_480_cov_1.925843_g34711_i0reverse_frame_3 - 0.15 12.0 0.4 0.6 10.1 0.1 1.9 1 1 1 2 2 2 0 Phage small terminase subunit PhoLip_ATPase_C PF16212.5 NODE_42316_length_480_cov_1.925843_g34711_i0reverse_frame_2 - 1.1e-26 94.1 11.2 1.3e-26 93.9 11.2 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal NOT2_3_5 PF04153.18 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_2 - 0.061 13.4 3.1 0.04 14.0 1.2 1.6 1 1 1 2 2 2 0 NOT2 / NOT3 / NOT5 family Glyco_tran_WbsX PF14307.6 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_2 - 0.076 12.5 5.0 0.081 12.4 5.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase WbsX Phage_min_cap2 PF06152.11 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_2 - 0.22 10.4 6.3 0.29 10.0 6.3 1.1 1 0 0 1 1 1 0 Phage minor capsid protein 2 Nup54 PF13874.6 NODE_42303_length_480_cov_55.523596_g34698_i0reverse_frame_2 - 2.9 8.0 9.5 0.18 11.9 2.8 2.0 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 CM2 PF03021.14 NODE_42298_length_480_cov_80.802247_g34693_i0reverse_frame_2 - 0.029 14.2 0.7 0.037 13.9 0.7 1.3 1 0 0 1 1 1 0 Influenza C virus M2 protein MafB19-deam PF14437.6 NODE_42296_length_480_cov_94.561798_g34691_i0reverse_frame_3 - 0.15 11.9 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 MafB19-like deaminase LNS2 PF08235.13 NODE_42293_length_480_cov_98.712360_g34688_i0reverse_frame_2 - 2.8e-09 36.8 0.0 3.9e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 LNS2 (Lipin/Ned1/Smp2) DNAJ_related PF12339.8 NODE_42288_length_480_cov_117.274157_g34683_i0forward_frame_2 - 0.07 13.4 0.7 0.093 12.9 0.7 1.3 1 0 0 1 1 1 0 DNA-J related protein Conotoxin PF02950.17 NODE_42277_length_480_cov_310.905618_g34672_i0reverse_frame_3 - 0.026 15.6 3.6 0.026 15.6 3.6 1.7 2 0 0 2 2 2 0 Conotoxin Cas_TM1802 PF09484.10 NODE_42270_length_480_cov_2372.741573_g34665_i0forward_frame_2 - 0.27 9.9 0.1 0.33 9.6 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) Spp-24 PF07448.11 ORF99659 - 5.6 7.2 8.9 5.1 7.4 0.3 3.3 2 2 1 3 3 3 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain DUF3755 PF12579.8 ORF9945 - 0.027 14.1 0.6 4.8 6.9 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3755) YtxH PF12732.7 ORF99116 - 0.27 11.8 1.7 0.4 11.2 1.7 1.3 1 0 0 1 1 1 0 YtxH-like protein Pirin_C_2 PF17954.1 ORF97803 - 8.8e-09 35.4 0.0 1.3e-08 34.9 0.0 1.2 1 0 0 1 1 1 1 Quercetinase C-terminal cupin domain Pirin PF02678.16 ORF97803 - 7.8e-05 22.6 0.0 0.00012 22.0 0.0 1.3 1 0 0 1 1 1 1 Pirin Cupin_2 PF07883.11 ORF97803 - 0.0046 16.6 0.0 0.11 12.3 0.0 2.2 2 0 0 2 2 2 1 Cupin domain MORN PF02493.20 ORF9663 - 1.1e-05 25.0 14.8 0.047 13.6 0.3 5.1 6 0 0 6 6 6 3 MORN repeat DUF3755 PF12579.8 ORF95545 - 0.016 14.8 3.1 2.5 7.8 0.3 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3755) DUF2759 PF10958.8 ORF94288 - 0.35 10.6 5.6 0.63 9.8 5.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) DUF3675 PF12428.8 ORF94018 - 0.22 12.1 0.3 0.35 11.4 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3675) DUF543 PF04418.12 ORF93989 - 0.026 14.5 0.1 0.049 13.6 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF543) FUSC_2 PF13515.6 ORF93989 - 0.068 13.3 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein-like DprA_WH PF17782.1 ORF93989 - 0.14 12.3 0.0 0.33 11.1 0.0 1.6 1 0 0 1 1 1 0 DprA winged helix domain MORN PF02493.20 ORF93679 - 1.1e-05 25.0 14.8 0.047 13.6 0.3 5.1 6 0 0 6 6 6 3 MORN repeat PH PF00169.29 ORF91348 - 3.4e-07 30.7 0.3 5.7e-07 30.0 0.3 1.4 1 0 0 1 1 1 1 PH domain Pkinase PF00069.25 ORF91348 - 3.8e-06 26.5 0.1 5.5e-06 25.9 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain PH_5 PF15405.6 ORF91348 - 0.00063 19.9 1.7 0.019 15.1 0.2 2.5 2 1 1 3 3 3 2 Pleckstrin homology domain zf-B_box PF00643.24 ORF8823 - 0.0067 16.5 2.3 0.0067 16.5 2.3 2.3 2 1 1 3 3 3 1 B-box zinc finger Pepsin-I3 PF06394.13 ORF8823 - 0.065 13.4 0.1 0.19 12.0 0.1 1.8 1 1 1 2 2 2 0 Pepsin inhibitor-3-like repeated domain WXG100 PF06013.12 ORF8823 - 0.1 12.9 0.0 0.4 10.9 0.0 1.8 2 0 0 2 2 2 0 Proteins of 100 residues with WXG MFS_1 PF07690.16 ORF88044 - 1.6e-07 30.6 11.8 1.9e-07 30.4 11.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily TraL PF07178.11 ORF88044 - 1 9.8 9.5 3.8 8.1 0.4 3.4 2 2 2 4 4 4 0 TraL protein Allantoicase PF03561.15 ORF86855 - 2.6 8.0 5.3 18 5.3 5.3 2.0 1 1 0 1 1 1 0 Allantoicase repeat TSCPD PF12637.7 ORF85610 - 0.17 12.1 0.1 0.26 11.5 0.1 1.3 1 0 0 1 1 1 0 TSCPD domain VIT1 PF01988.19 ORF83806 - 0.16 11.8 2.5 0.21 11.4 2.5 1.2 1 0 0 1 1 1 0 VIT family Vma12 PF11712.8 ORF83806 - 0.82 9.7 2.3 1.3 9.1 2.3 1.4 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase RcnB PF11776.8 ORF82688 - 0.26 11.4 0.9 0.48 10.5 0.9 1.3 1 0 0 1 1 1 0 Nickel/cobalt transporter regulator Corona_NS1 PF06145.11 ORF82344 - 0.13 11.8 0.6 0.26 10.9 0.6 1.5 1 0 0 1 1 1 0 Coronavirus nonstructural protein NS1 ubiquitin PF00240.23 ORF82130 - 0.0075 16.0 0.1 0.017 14.9 0.1 1.6 1 0 0 1 1 1 1 Ubiquitin family DUF483 PF04467.12 ORF82130 - 0.031 14.3 0.5 0.13 12.2 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF483) BAG6 PF12057.8 ORF80988 - 0.058 13.1 0.5 2.8 7.6 0.1 2.2 2 0 0 2 2 2 0 BCL2-associated athanogene 6 SerH PF06873.11 ORF80699 - 0.0075 15.1 2.3 0.0078 15.1 2.3 1.1 1 0 0 1 1 1 1 Cell surface immobilisation antigen SerH DZR PF12773.7 ORF80699 - 0.043 13.8 1.4 0.15 12.1 1.0 2.1 2 0 0 2 2 2 0 Double zinc ribbon DUF2197 PF09963.9 ORF80699 - 0.061 13.6 2.4 0.14 12.5 0.1 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) zf_UBZ PF18439.1 ORF80699 - 0.16 11.6 0.3 0.6 9.8 0.1 2.0 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-P11 PF03854.14 ORF79791 - 0.18 11.5 7.6 0.91 9.2 0.7 2.5 2 1 0 2 2 2 0 P-11 zinc finger mRNA_triPase PF02940.15 ORF79053 - 1.8 8.2 14.2 8.7 6.0 14.2 1.9 1 1 0 1 1 1 0 mRNA capping enzyme, beta chain DUF5567 PF17722.1 ORF78616 - 0.016 15.1 0.1 0.019 14.8 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5567) DUF832 PF05734.11 ORF77787 - 0.073 12.5 0.4 0.17 11.4 0.2 1.6 1 1 1 2 2 2 0 Herpesvirus protein of unknown function (DUF832) Sec23_BS PF08033.12 ORF77763 - 0.0014 19.3 0.0 0.0021 18.8 0.0 1.3 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain Eapp_C PF10238.9 ORF77371 - 4.2e-32 111.3 6.3 7.6e-25 87.7 2.7 2.1 1 1 1 2 2 2 2 E2F-associated phosphoprotein Yippee-Mis18 PF03226.14 ORF77371 - 0.00092 19.4 2.3 0.0016 18.6 2.3 1.3 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly PhnA_Zn_Ribbon PF08274.12 ORF77371 - 2.1 8.4 0.0 2.1 8.4 0.0 2.9 2 1 0 2 2 2 0 PhnA Zinc-Ribbon DUF3799 PF12684.7 ORF77332 - 3.4e-22 79.4 0.0 3.9e-22 79.2 0.0 1.0 1 0 0 1 1 1 1 PDDEXK-like domain of unknown function (DUF3799) Apolipo_F PF15148.6 ORF75889 - 0.0063 16.0 0.0 0.0089 15.5 0.0 1.2 1 0 0 1 1 1 1 Apolipoprotein F RRM_1 PF00076.22 ORF75639 - 2.3e-12 46.5 0.0 3.1e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF75639 - 3.2e-06 27.0 3.3 4.8e-06 26.4 3.3 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_5 PF14787.6 ORF75639 - 8.4e-05 22.2 3.5 0.00013 21.6 3.5 1.3 1 0 0 1 1 1 1 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF75639 - 0.00012 21.9 0.2 0.00027 20.8 0.2 1.6 1 0 0 1 1 1 1 Zinc knuckle OB_RNB PF08206.11 ORF75639 - 0.0048 16.5 0.2 0.022 14.4 0.1 2.2 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_2 PF13696.6 ORF75639 - 0.083 12.7 2.0 0.13 12.1 2.0 1.3 1 0 0 1 1 1 0 Zinc knuckle Omega_Repress PF07764.11 ORF72475 - 0.018 15.6 3.5 0.042 14.4 1.4 2.1 2 0 0 2 2 2 0 Omega Transcriptional Repressor Fez1 PF06818.15 ORF7246 - 0.0096 16.4 7.7 0.014 15.8 7.7 1.4 1 0 0 1 1 1 1 Fez1 OST-HTH PF12872.7 ORF7246 - 0.13 12.1 0.4 16 5.4 0.1 2.2 2 0 0 2 2 2 0 OST-HTH/LOTUS domain HALZ PF02183.18 ORF7246 - 0.16 12.2 12.9 0.56 10.5 1.1 3.3 3 0 0 3 3 3 0 Homeobox associated leucine zipper DUF5339 PF17274.2 ORF7246 - 2 9.3 9.3 2.2 9.2 3.9 2.9 3 0 0 3 3 3 0 Family of unknown function (DUF5339) KLRAQ PF10205.9 ORF7246 - 2.2 8.6 13.1 11 6.4 12.1 2.5 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein CCDC-167 PF15188.6 ORF7246 - 2.6 8.4 9.0 1.7 9.1 4.2 2.2 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 CENP-H PF05837.12 ORF7246 - 3.4 8.1 10.8 3 8.3 8.5 1.9 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Swi5 PF07061.11 ORF7246 - 6.2 7.0 10.2 4 7.6 2.8 2.6 2 1 0 2 2 2 0 Swi5 FAM76 PF16046.5 ORF7246 - 6.7 6.0 14.1 17 4.7 14.1 1.7 1 1 0 1 1 1 0 FAM76 protein UPF0242 PF06785.11 ORF7246 - 7.9 6.5 13.9 4.9 7.2 1.0 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus AbiH PF14253.6 ORF7237 - 0.061 13.2 4.9 0.068 13.0 4.9 1.1 1 0 0 1 1 1 0 Bacteriophage abortive infection AbiH BRE1 PF08647.11 ORF72141 - 2.2 8.4 18.5 2.7 8.1 14.3 2.6 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase Glyoxalase_6 PF18029.1 ORF71810 - 0.0023 18.7 0.0 0.0031 18.3 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 ORF71810 - 0.024 14.8 0.0 0.067 13.4 0.0 1.8 1 1 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF71810 - 0.1 12.9 0.0 0.28 11.5 0.0 1.7 1 1 1 2 2 2 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MORN PF02493.20 ORF71262 - 2.7e-09 36.4 25.8 0.0036 17.1 0.1 6.1 7 0 0 7 7 7 5 MORN repeat NADH-u_ox-rdase PF10785.9 ORF70105 - 3.2e-08 34.1 0.6 4.4e-08 33.7 0.6 1.2 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit TMEM220 PF15071.6 ORF70105 - 0.00084 20.1 0.1 0.0011 19.7 0.1 1.2 1 0 0 1 1 1 1 Transmembrane family 220, helix TFIIA_gamma_N PF02268.16 ORF69295 - 2.1e-11 43.7 0.1 3.3e-11 43.0 0.1 1.4 1 0 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit, helical domain Glyco_hydro_68 PF02435.16 ORF69295 - 0.014 14.2 0.1 0.015 14.2 0.1 1.1 1 0 0 1 1 1 0 Levansucrase/Invertase TFIIA_gamma_C PF02751.14 ORF69295 - 0.059 13.5 0.0 0.18 12.0 0.0 1.8 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit Spp-24 PF07448.11 ORF6730 - 5.6 7.2 8.9 5.1 7.4 0.3 3.3 2 2 1 3 3 3 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain Oxidored_q4 PF00507.19 ORF66699 - 0.078 13.1 0.7 0.11 12.7 0.7 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PRA-PH PF01503.17 ORF66142 - 7.5e-15 55.2 0.0 1e-14 54.7 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 ORF66142 - 0.0054 16.9 0.0 0.0081 16.3 0.0 1.3 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain DmpG_comm PF07836.11 ORF66142 - 0.061 12.9 0.1 0.33 10.5 0.0 2.0 2 0 0 2 2 2 0 DmpG-like communication domain Phosphoprotein PF00922.17 ORF65249 - 0.018 14.6 0.1 0.021 14.4 0.1 1.2 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein WSC PF01822.19 ORF64635 - 0.074 13.3 0.1 0.14 12.3 0.1 1.4 1 0 0 1 1 1 0 WSC domain RCDG1 PF15725.5 ORF64383 - 4.1 7.9 10.5 3.8 8.0 5.3 2.2 2 0 0 2 2 2 0 Renal cancer differentiation gene 1 protein DUF444 PF04285.12 ORF63955 - 0.018 14.1 0.2 0.021 13.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF444) DUF1768 PF08719.11 ORF63870 - 8.2e-41 139.9 0.1 9.5e-41 139.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) DUF4028 PF13220.6 ORF63870 - 0.1 12.4 0.1 0.2 11.5 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) ELH PF02323.15 ORF63870 - 0.12 11.7 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Egg-laying hormone precursor Phage_30_3 PF08010.11 ORF63870 - 0.13 12.0 0.0 0.35 10.7 0.0 1.7 1 1 0 1 1 1 0 Bacteriophage protein GP30.3 TMEM154 PF15102.6 ORF63225 - 0.0027 17.6 0.4 0.036 14.0 0.0 2.0 1 1 0 2 2 2 2 TMEM154 protein family PsbW PF07123.12 ORF62915 - 0.37 10.8 2.6 0.32 11.0 1.2 1.7 1 1 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) dCMP_cyt_deam_2 PF08211.12 ORF62403 - 1.2e-45 154.9 0.0 1.5e-45 154.6 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region TMEM154 PF15102.6 ORF58290 - 0.0027 17.6 0.4 0.036 14.0 0.0 2.0 1 1 0 2 2 2 2 TMEM154 protein family DUF2759 PF10958.8 ORF56186 - 0.35 10.6 5.6 0.63 9.8 5.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) ASL_C PF08328.11 ORF56026 - 1.4e-53 179.9 0.0 1.7e-53 179.6 0.0 1.1 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal Lyase_1 PF00206.20 ORF56026 - 0.065 12.6 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Lyase CbiA PF01656.23 ORF55606 - 0.0012 18.9 0.0 0.0015 18.6 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 ORF55606 - 0.14 12.0 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain ParA PF10609.9 ORF55606 - 0.19 11.1 0.0 1.1 8.6 0.0 1.9 1 1 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase DUF1724 PF08350.10 ORF5452 - 0.03 14.5 0.2 0.099 12.8 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1724) DUF3584 PF12128.8 ORF5422 - 0.71 7.3 10.8 0.87 7.0 10.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Pox_P21 PF05313.12 ORF52306 - 0.19 11.3 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 Poxvirus P21 membrane protein DUF4636 PF15468.6 ORF51250 - 3 7.5 6.6 0.44 10.2 0.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4636) MORN PF02493.20 ORF50668 - 1.1e-28 97.3 56.4 6.2e-07 28.9 4.7 7.6 7 1 0 7 7 7 7 MORN repeat EF-hand_6 PF13405.6 ORF4974 - 6.2e-11 41.3 10.5 1.3e-05 24.7 0.2 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF4974 - 1e-08 34.1 16.0 0.00011 21.4 3.8 3.0 4 0 0 4 4 4 2 EF hand EF-hand_7 PF13499.6 ORF4974 - 5.1e-07 30.1 5.3 0.0015 18.9 0.1 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF4974 - 1.1e-05 24.7 11.2 0.019 14.5 3.2 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF4974 - 2.2e-05 24.2 9.0 0.018 14.9 2.5 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF4974 - 0.00084 19.3 2.2 0.016 15.2 0.2 2.2 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand Vac14_Fab1_bd PF12755.7 ORF4974 - 0.087 13.4 0.1 0.19 12.4 0.1 1.6 1 0 0 1 1 1 0 Vacuolar 14 Fab1-binding region ERGIC_N PF13850.6 ORF48997 - 0.0052 17.1 0.7 0.0076 16.6 0.4 1.6 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Arch_flagellin PF01917.16 ORF48997 - 6.7 6.9 12.1 1.3e+03 -0.5 12.1 2.4 1 1 0 1 1 1 0 Archaebacterial flagellin His_Phos_1 PF00300.22 ORF48453 - 1.5e-09 37.8 0.0 2.8e-09 37.0 0.0 1.5 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Adeno_IVa2 PF02456.15 ORF45931 - 0.033 13.0 0.0 0.037 12.8 0.0 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein ATP-synt_DE_N PF02823.16 ORF45931 - 0.051 13.5 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DUF4050 PF13259.6 ORF45464 - 0.083 13.2 2.0 0.12 12.7 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) Fer2_2 PF01799.20 ORF44419 - 3.3e-24 84.7 0.5 3.3e-24 84.7 0.5 1.6 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 ORF44419 - 5.2e-07 29.5 1.1 5.2e-07 29.5 1.1 1.9 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 ORF44419 - 0.023 14.7 1.8 0.023 14.7 1.8 1.6 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain HicB-like_2 PF15970.5 ORF41399 - 0.0041 17.2 1.0 0.0094 16.1 0.4 1.9 2 0 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system AKAP7_NLS PF10469.9 ORF41399 - 0.018 15.0 2.2 0.024 14.6 2.2 1.4 1 1 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain DUF3108 PF11306.8 ORF41399 - 0.051 13.5 0.5 0.059 13.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3108) Vwaint PF14624.6 ORF41044 - 0.00096 19.2 0.3 0.002 18.2 0.2 1.6 1 1 0 1 1 1 1 VWA / Hh protein intein-like DUF4322 PF14210.6 ORF41044 - 0.082 12.8 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) EF-hand_6 PF13405.6 ORF39073 - 0.1 12.6 0.4 0.74 9.9 0.1 2.5 3 0 0 3 3 3 0 EF-hand domain IZUMO PF15005.6 ORF37533 - 0.0033 18.0 7.1 0.0051 17.3 5.3 1.8 1 1 1 2 2 2 2 Izumo sperm-egg fusion, Ig domain-associated DUF16 PF01519.16 ORF37533 - 0.11 13.0 19.7 0.042 14.3 10.1 2.8 1 1 1 2 2 2 0 Protein of unknown function DUF16 UPF0061 PF02696.14 ORF37533 - 0.18 10.6 4.4 0.19 10.5 4.4 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family EF_TS PF00889.19 ORF37533 - 0.19 11.3 7.3 0.024 14.2 2.8 1.7 1 1 1 2 2 2 0 Elongation factor TS PIG-P PF08510.12 ORF37533 - 0.29 11.0 0.7 0.53 10.2 0.6 1.6 1 1 0 1 1 1 0 PIG-P Spc7 PF08317.11 ORF37533 - 0.48 9.3 19.9 0.9 8.4 19.7 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein SlyX PF04102.12 ORF37533 - 2.2 9.0 14.2 10 6.8 0.8 3.9 1 1 3 4 4 4 0 SlyX DUF4446 PF14584.6 ORF37533 - 2.7 7.9 14.4 0.65 10.0 4.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) PHM7_cyt PF14703.6 ORF37533 - 3 8.1 8.5 2.9 8.1 7.5 1.4 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Spc42p PF11544.8 ORF37533 - 3.7 7.6 16.7 0.51 10.4 3.7 3.4 2 2 2 4 4 4 0 Spindle pole body component Spc42p Fib_alpha PF08702.10 ORF37533 - 4.4 7.5 15.9 4.5 7.5 10.8 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Prominin PF05478.11 ORF37533 - 7.2 4.4 9.7 8.5 4.2 9.7 1.1 1 0 0 1 1 1 0 Prominin GDA1_CD39 PF01150.17 ORF35885 - 0.041 12.5 0.1 0.052 12.2 0.1 1.1 1 0 0 1 1 1 0 GDA1/CD39 (nucleoside phosphatase) family DUF4389 PF14333.6 ORF33436 - 0.024 14.6 0.7 0.038 13.9 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4389) DUF5329 PF17263.2 ORF3320 - 0.16 12.1 0.0 13 6.0 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5329) Rep_Org_C PF06926.11 ORF32525 - 0.015 15.6 1.3 0.035 14.4 1.3 1.6 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus DoxX PF07681.12 ORF32489 - 0.00052 20.6 2.0 0.00052 20.6 2.0 1.5 2 0 0 2 2 2 1 DoxX Bestrophin PF01062.21 ORF32489 - 0.019 14.4 0.3 0.022 14.2 0.3 1.1 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel DUF2052 PF09747.9 ORF32406 - 0.39 10.8 7.9 0.53 10.4 7.9 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) eIF-3c_N PF05470.12 ORF32406 - 2.8 6.2 6.4 3.3 5.9 6.4 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus CDC45 PF02724.14 ORF32406 - 6.8 4.8 10.8 6.7 4.9 10.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Peptidase_C1 PF00112.23 ORF3239 - 5.3e-28 98.6 0.6 7.6e-28 98.1 0.6 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF3239 - 0.0017 17.2 0.5 0.0024 16.7 0.5 1.2 1 0 0 1 1 1 1 Peptidase C1-like family Phage_integrase PF00589.22 ORF32303 - 4.4e-23 81.9 0.0 5.7e-23 81.6 0.0 1.1 1 0 0 1 1 1 1 Phage integrase family DUF4256 PF14066.6 ORF31804 - 0.16 11.7 0.4 0.25 11.0 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) XhlA PF10779.9 ORF31804 - 8.2 6.7 6.6 12 6.2 1.8 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Serine_rich PF08824.10 ORF27074 - 0.045 13.7 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 Serine rich protein interaction domain DUF4636 PF15468.6 ORF26977 - 3 7.5 6.6 0.44 10.2 0.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4636) Mei5_like PF17021.5 ORF2642 - 0.0067 16.5 0.4 0.012 15.6 0.4 1.4 1 0 0 1 1 1 1 Putative double-strand recombination repair-like DUF4256 PF14066.6 ORF25000 - 0.16 11.7 0.4 0.25 11.0 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) XhlA PF10779.9 ORF25000 - 8.2 6.7 6.6 12 6.2 1.8 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Gp_dh_C PF02800.20 ORF22602 - 3.6e-63 211.9 0.1 4.1e-63 211.7 0.1 1.0 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DUF4995 PF16386.5 ORF22364 - 0.45 10.6 2.2 4.2 7.4 0.1 2.9 1 1 2 3 3 3 0 Domain of unknown function EF-hand_7 PF13499.6 ORF21968 - 1.2e-13 51.2 0.7 8.4e-09 35.8 0.1 1.7 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF21968 - 1.8e-11 42.7 0.1 1.7e-05 24.0 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF21968 - 2.1e-09 36.6 0.1 0.00028 20.6 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF21968 - 7.3e-07 28.9 0.0 2.1e-06 27.5 0.0 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF21968 - 8.2e-06 25.1 0.4 0.034 13.6 0.0 2.7 2 1 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF21968 - 0.024 15.0 0.1 0.032 14.6 0.1 1.3 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Rep_2 PF01719.17 ORF21968 - 0.052 13.3 0.1 0.084 12.7 0.1 1.3 1 0 0 1 1 1 0 Plasmid replication protein EF-hand_4 PF12763.7 ORF21968 - 0.087 12.8 0.5 0.32 10.9 0.1 1.8 1 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Nore1-SARAH PF16517.5 ORF17260 - 0.21 11.5 0.0 0.34 10.9 0.0 1.3 1 0 0 1 1 1 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain ORC4_C PF14629.6 ORF15945 - 0.0057 16.0 0.1 0.0085 15.5 0.1 1.3 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 4 C-terminus DUF2865 PF11064.8 ORF151704 - 0.04 14.3 0.2 0.067 13.6 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2865) LRR_2 PF07723.13 ORF151693 - 0.16 12.7 1.4 0.6 10.9 0.1 2.7 3 1 0 3 3 3 0 Leucine Rich Repeat Spike_NTD PF16451.5 ORF151667 - 0.065 12.6 0.0 0.085 12.2 0.0 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain GyrB_insert PF18053.1 ORF151667 - 1.4 8.8 10.9 0.24 11.3 1.7 2.0 1 1 1 2 2 2 0 DNA gyrase B subunit insert domain ATP-synt_E PF05680.12 ORF151667 - 3.9 7.9 13.5 0.59 10.5 0.2 2.3 2 1 0 2 2 2 0 ATP synthase E chain Phage_HK97_TLTM PF06120.11 ORF151667 - 7.4 5.7 14.6 14 4.7 14.6 1.5 1 1 0 1 1 1 0 Tail length tape measure protein DUF2140 PF09911.9 ORF151667 - 8.6 5.9 9.4 1.3 8.5 3.6 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) BDHCT PF08072.11 ORF151085 - 1.1 9.4 8.4 18 5.5 0.0 3.6 3 1 0 3 3 3 0 BDHCT (NUC031) domain BLOC1_2 PF10046.9 ORF150560 - 0.00029 21.1 9.8 0.00029 21.1 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Y2_Tnp PF04986.13 ORF150560 - 0.0035 17.4 0.2 0.0049 16.9 0.2 1.3 1 0 0 1 1 1 1 Putative transposase TMF_TATA_bd PF12325.8 ORF150560 - 0.0079 16.4 10.2 0.43 10.8 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding ZnuA PF01297.17 ORF150560 - 0.015 14.7 0.4 0.018 14.5 0.4 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Baculo_PEP_C PF04513.12 ORF150560 - 0.022 14.8 6.1 0.036 14.1 6.1 1.3 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Macoilin PF09726.9 ORF150560 - 0.067 11.8 5.3 0.078 11.5 5.3 1.0 1 0 0 1 1 1 0 Macoilin family DivIC PF04977.15 ORF150560 - 0.082 12.7 8.5 2.2 8.1 0.9 2.6 1 1 0 2 2 2 0 Septum formation initiator Tup_N PF08581.10 ORF150560 - 0.49 10.7 8.7 9.1 6.7 3.8 2.2 1 1 1 2 2 2 0 Tup N-terminal PRKG1_interact PF15898.5 ORF150560 - 0.59 11.1 7.3 0.83 10.6 0.5 2.5 3 0 0 3 3 3 0 cGMP-dependent protein kinase interacting domain DUF1664 PF07889.12 ORF150560 - 0.73 9.9 9.3 1.2 9.2 6.3 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Spc24 PF08286.11 ORF150560 - 2.8 8.2 10.2 15 5.9 3.9 2.4 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF5595 PF18077.1 ORF150560 - 3 8.0 8.2 2.8 8.1 2.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5595) CDC45 PF02724.14 ORF149860 - 0.62 8.3 8.5 0.7 8.1 8.5 1.0 1 0 0 1 1 1 0 CDC45-like protein Ribosomal_L32e PF01655.18 ORF148200 - 0.016 15.6 0.0 0.03 14.7 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L32 Synaptobrevin PF00957.21 ORF147175 - 3.2 7.6 7.6 5.9 6.7 7.6 1.4 1 0 0 1 1 1 0 Synaptobrevin Thioredoxin PF00085.20 ORF146557 - 6.7e-23 80.6 0.1 8.5e-23 80.3 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF146557 - 0.0003 21.2 0.2 0.022 15.2 0.2 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 ORF146557 - 0.0039 17.2 0.0 0.0057 16.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_8 PF13905.6 ORF146557 - 0.08 13.3 0.1 1.9 8.9 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin-like Thioredoxin_7 PF13899.6 ORF146557 - 0.11 12.7 0.0 0.27 11.4 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin-like COE1_DBD PF16422.5 ORF146557 - 0.15 11.5 0.0 0.26 10.7 0.0 1.3 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain zf-RING_2 PF13639.6 ORF145789 - 5.5e-13 49.0 6.3 5.5e-13 49.0 6.3 1.9 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF145789 - 2.1e-08 34.0 0.9 5.9e-08 32.6 1.0 1.7 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF145789 - 2.3e-08 33.6 4.0 5.3e-08 32.5 4.0 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF145789 - 5.9e-08 32.9 4.1 5.9e-08 32.9 4.1 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF145789 - 3.5e-07 30.0 5.7 7.5e-07 28.9 5.7 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF145789 - 7.3e-07 29.0 4.1 1.4e-06 28.2 4.1 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF145789 - 8.5e-07 28.7 4.8 1.7e-06 27.8 4.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF145789 - 9.8e-07 28.5 4.8 9.8e-07 28.5 4.8 1.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF145789 - 2.5e-06 27.5 1.0 2.5e-06 27.5 1.0 1.8 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF145789 - 0.00043 20.1 6.0 0.00085 19.1 6.0 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF145789 - 0.0011 18.5 5.6 0.0011 18.5 5.6 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF145789 - 0.0024 17.7 4.1 0.0024 17.7 4.1 2.6 3 0 0 3 3 2 1 Prokaryotic RING finger family 1 Vps39_2 PF10367.9 ORF145789 - 0.0025 18.2 1.4 0.0056 17.1 0.2 2.0 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 zf-RING_4 PF14570.6 ORF145789 - 0.0027 17.5 6.3 0.0027 17.5 6.3 2.1 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain Rtf2 PF04641.12 ORF145789 - 0.005 16.2 0.4 0.0068 15.8 0.4 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-C3HC4_4 PF15227.6 ORF145789 - 0.014 15.6 7.2 0.061 13.5 7.2 2.0 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF145789 - 0.022 14.8 0.2 0.037 14.0 0.2 1.4 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain RINGv PF12906.7 ORF145789 - 0.99 9.6 10.8 1.2 9.3 7.2 2.6 2 1 0 2 2 2 0 RING-variant domain zf-Nse PF11789.8 ORF145789 - 1.6 8.6 5.3 0.37 10.6 1.9 1.8 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit DnaJ_CXXCXGXG PF00684.19 ORF144664 - 0.0097 16.2 11.2 0.04 14.3 10.5 2.3 1 1 1 2 2 2 2 DnaJ central domain Transp_Tc5_C PF04236.15 ORF144664 - 1.8 9.0 6.7 11 6.5 0.6 2.3 2 0 0 2 2 2 0 Tc5 transposase C-terminal domain DUF4636 PF15468.6 ORF144546 - 3 7.5 6.6 0.44 10.2 0.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4636) TMEM72 PF16054.5 ORF14140 - 0.0084 15.8 0.2 0.014 15.1 0.2 1.4 1 0 0 1 1 1 1 Transmembrane protein family 72 SR-25 PF10500.9 ORF139717 - 1 8.9 8.0 1.4 8.5 8.0 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein WRC PF08879.10 ORF139035 - 0.019 14.7 11.2 0.019 14.7 11.2 2.5 2 1 0 2 2 2 0 WRC zf-P11 PF03854.14 ORF135467 - 0.18 11.5 7.6 0.91 9.2 0.7 2.5 2 1 0 2 2 2 0 P-11 zinc finger GidB PF02527.15 ORF13408 - 4e-55 186.0 0.0 4.7e-55 185.8 0.0 1.0 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_31 PF13847.6 ORF13408 - 1.4e-05 24.9 0.0 1.5e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF13408 - 0.00032 21.4 0.0 0.00046 20.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF13408 - 0.023 14.3 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase small domain DUF4256 PF14066.6 ORF132711 - 0.16 11.7 0.4 0.25 11.0 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) XhlA PF10779.9 ORF132711 - 8.2 6.7 6.6 12 6.2 1.8 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Papilloma_E5 PF03025.14 ORF132700 - 0.064 13.4 1.1 0.064 13.4 1.1 1.7 2 0 0 2 2 2 0 Papillomavirus E5 AAA_15 PF13175.6 ORF131938 - 0.11 12.2 8.0 0.2 11.3 8.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain DUF4256 PF14066.6 ORF131754 - 0.16 11.7 0.4 0.25 11.0 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) XhlA PF10779.9 ORF131754 - 8.2 6.7 6.6 12 6.2 1.8 2.3 2 0 0 2 2 2 0 Haemolysin XhlA # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks158.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks158.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks158.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks158.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Tic22 PF04278.12 ORF127779 - 0.053 12.9 0.1 0.072 12.5 0.1 1.2 1 0 0 1 1 1 0 Tic22-like family Aspzincin_M35 PF14521.6 ORF127284 - 1.1e-18 68.2 0.4 8e-17 62.1 0.4 2.1 1 1 0 1 1 1 1 Lysine-specific metallo-endopeptidase PBP PF01161.20 ORF127284 - 0.018 15.3 0.1 0.031 14.6 0.0 1.5 2 0 0 2 2 2 0 Phosphatidylethanolamine-binding protein Tctex-1 PF03645.13 ORF124549 - 2.8e-19 69.2 1.7 7.1e-19 67.9 1.7 1.7 1 1 0 1 1 1 1 Tctex-1 family DUF1340 PF07067.11 ORF124549 - 0.12 11.7 1.2 2.8 7.3 0.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1340) Tugs PF17840.1 ORF124549 - 0.13 12.5 0.0 0.38 11.0 0.0 1.7 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain zf-RING_2 PF13639.6 ORF124401 - 3.5e-13 49.7 6.4 3.5e-13 49.7 6.4 1.9 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF124401 - 1.4e-08 34.9 3.9 1.4e-08 34.9 3.9 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF124401 - 1.4e-08 34.6 0.8 4e-08 33.2 0.8 1.8 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF124401 - 2.3e-08 33.6 4.0 5.3e-08 32.5 4.0 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF124401 - 2.1e-07 30.7 5.5 4.6e-07 29.6 5.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF124401 - 3.7e-07 30.0 4.4 6.8e-07 29.1 4.4 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF124401 - 3.7e-07 29.9 4.9 3.7e-07 29.9 4.9 1.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF124401 - 9.2e-07 28.6 4.6 1.8e-06 27.7 4.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF124401 - 1.7e-06 28.0 1.0 1.7e-06 28.0 1.0 1.8 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF124401 - 7.1e-05 22.6 5.4 0.00014 21.7 5.4 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Vps39_2 PF10367.9 ORF124401 - 0.0017 18.8 1.1 0.0056 17.1 0.2 2.1 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 Zn_ribbon_17 PF17120.5 ORF124401 - 0.0019 17.8 5.2 0.0019 17.8 5.2 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF124401 - 0.0024 17.7 4.1 0.0024 17.7 4.1 2.6 3 0 0 3 3 2 1 Prokaryotic RING finger family 1 Rtf2 PF04641.12 ORF124401 - 0.0032 16.9 0.3 0.0041 16.5 0.3 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-RING_4 PF14570.6 ORF124401 - 0.0036 17.1 6.4 0.0036 17.1 6.4 2.1 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF124401 - 0.0094 16.1 6.3 0.042 14.0 6.4 2.0 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 ORF124401 - 0.018 15.0 0.2 0.03 14.3 0.2 1.4 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Rad50_zn_hook PF04423.14 ORF124401 - 0.13 12.1 0.9 0.23 11.3 0.0 1.7 2 0 0 2 2 2 0 Rad50 zinc hook motif U-box PF04564.15 ORF124401 - 0.16 12.2 0.0 0.31 11.3 0.0 1.4 1 0 0 1 1 1 0 U-box domain RINGv PF12906.7 ORF124401 - 0.69 10.1 10.8 0.85 9.8 7.1 2.6 2 1 0 2 2 2 0 RING-variant domain zf-Nse PF11789.8 ORF124401 - 1.2 9.0 5.3 0.28 11.1 2.0 1.8 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit DUF5523 PF17661.1 ORF123855 - 0.51 10.0 5.8 0.17 11.6 2.8 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5523) 2Fe-2S_Ferredox PF11591.8 ORF120698 - 0.22 11.4 2.8 1.3 9.0 0.1 2.5 2 0 0 2 2 2 0 Ferredoxin chloroplastic transit peptide DUF2759 PF10958.8 ORF116244 - 0.35 10.6 5.6 0.63 9.8 5.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) FSH1 PF03959.13 ORF115757 - 5.7e-19 68.6 0.0 7.4e-19 68.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Rep_Org_C PF06926.11 ORF115164 - 0.015 15.6 1.3 0.035 14.4 1.3 1.6 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus DUF4252 PF14060.6 ORF113176 - 0.75 9.7 5.5 1 9.3 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) p450 PF00067.22 ORF110795 - 8.4e-30 103.9 0.0 9e-30 103.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 TMEM154 PF15102.6 ORF110366 - 0.012 15.5 0.1 0.032 14.1 0.0 1.7 2 0 0 2 2 2 0 TMEM154 protein family DUF1211 PF06736.11 ORF109275 - 0.0068 16.8 0.2 0.011 16.2 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1211) DUF1768 PF08719.11 ORF108935 - 3.2e-40 138.0 0.1 3.7e-40 137.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) ELH PF02323.15 ORF108935 - 0.015 14.6 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor DUF4028 PF13220.6 ORF108935 - 0.082 12.7 0.6 0.44 10.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4028) Vac14_Fig4_bd PF11916.8 ORF106773 - 1.7e-34 119.1 0.9 2.2e-34 118.7 0.9 1.1 1 0 0 1 1 1 1 Vacuolar protein 14 C-terminal Fig4p binding Spp-24 PF07448.11 ORF105345 - 5.6 7.2 8.9 5.1 7.4 0.3 3.3 2 2 1 3 3 3 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain DUF3755 PF12579.8 ORF10438 - 0.027 14.1 0.6 4.8 6.9 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3755) Leuk-A4-hydro_C PF09127.11 ORF103644 - 5.3e-06 26.5 0.1 7.8e-06 25.9 0.1 1.2 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Cytadhesin_P30 PF07271.11 ORF102935 - 0.038 13.6 0.9 0.047 13.3 0.9 1.2 1 0 0 1 1 1 0 Cytadhesin P30/P32 Pkinase PF00069.25 ORF1024 - 2.3e-13 50.1 0.0 3.1e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF1024 - 3e-05 23.4 0.0 3.7e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase p450 PF00067.22 ORF10093 - 8.4e-30 103.9 0.0 9e-30 103.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 RIH_assoc PF08454.11 NODE_42821_length_472_cov_1.608696_g35183_i0reverse_frame_1 - 0.034 14.0 4.6 1.4 8.8 0.7 2.2 2 0 0 2 2 2 0 RyR and IP3R Homology associated AAA_5 PF07728.14 NODE_42775_length_472_cov_114.569794_g35138_i0forward_frame_1 - 1.5e-14 54.2 0.0 2e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) DUF1794 PF08768.11 NODE_42761_length_472_cov_260.137300_g35124_i0forward_frame_1 - 0.93 9.4 2.4 19 5.2 0.1 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF1794) YadA_head PF05658.14 NODE_42761_length_472_cov_260.137300_g35124_i0forward_frame_1 - 2.6 8.5 56.4 23 5.5 0.1 10.4 3 2 6 9 9 9 0 Head domain of trimeric autotransporter adhesin F-box-like PF12937.7 NODE_42757_length_472_cov_370.208238_g20359_i3reverse_frame_1 - 2 8.4 5.5 0.38 10.7 1.5 1.8 2 0 0 2 2 2 0 F-box-like RCC1_2 PF13540.6 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 5.2e-05 22.9 7.9 0.11 12.3 0.7 3.4 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 0.009 16.1 0.2 13 5.8 0.0 3.0 2 1 0 2 2 2 2 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 0.012 16.1 0.0 6.9 7.2 0.0 3.0 3 1 0 3 3 3 0 Spectrin repeat FtsQ PF03799.15 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 0.068 14.0 0.0 0.52 11.2 0.0 2.1 1 1 1 2 2 2 0 Cell division protein FtsQ MinC_C PF03775.16 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_1 - 0.085 12.8 0.3 4.7 7.2 0.0 2.9 2 1 0 3 3 3 0 Septum formation inhibitor MinC, C-terminal domain SR-25 PF10500.9 NODE_42755_length_472_cov_390.629291_g35119_i0forward_frame_1 - 1.8 8.1 14.8 2.6 7.6 14.8 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF5592 PF17332.2 NODE_42740_length_473_cov_2.458904_g35108_i0reverse_frame_1 - 2.6 8.6 7.5 0.69 10.5 3.4 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5592) Kinesin PF00225.23 NODE_42739_length_473_cov_2.755708_g35107_i0forward_frame_1 - 6.3e-08 31.9 0.0 9.2e-08 31.4 0.0 1.2 1 0 0 1 1 1 1 Kinesin motor domain zf-CCHC PF00098.23 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 1.9e-06 27.7 4.7 5.2e-06 26.3 4.7 1.8 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 0.04 13.7 8.5 0.092 12.6 8.5 1.6 1 0 0 1 1 1 0 Zinc knuckle Tox-ART-HYE1 PF15634.6 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 0.11 11.8 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 HYE1 signature containing ADP-ribosyltransferase DcuC PF03606.15 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 0.23 9.9 0.0 0.31 9.4 0.0 1.1 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier zf-CCHC_3 PF13917.6 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_1 - 2.3 8.2 8.3 0.091 12.7 2.5 1.7 2 0 0 2 2 2 0 Zinc knuckle DUF4528 PF15031.6 NODE_42728_length_473_cov_67.812785_g35098_i0reverse_frame_1 - 0.31 11.1 3.3 0.85 9.7 2.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4528) zf-LITAF-like PF10601.9 NODE_42728_length_473_cov_67.812785_g35098_i0forward_frame_1 - 0.93 9.8 10.3 0.19 12.0 1.4 2.5 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Chor_lyase PF04345.13 NODE_42727_length_473_cov_77.141553_g35097_i0reverse_frame_1 - 0.1 12.3 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Chorismate lyase NapE PF06796.11 NODE_42727_length_473_cov_77.141553_g35097_i0forward_frame_1 - 0.063 12.8 0.3 0.063 12.8 0.3 2.4 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE COOH-NH2_lig PF14395.6 NODE_42722_length_473_cov_85.771689_g35092_i0reverse_frame_1 - 0.058 12.6 1.4 0.081 12.1 1.4 1.2 1 0 0 1 1 1 0 Phage phiEco32-like COOH.NH2 ligase-type 2 Fez1 PF06818.15 NODE_42722_length_473_cov_85.771689_g35092_i0reverse_frame_1 - 0.4 11.1 20.9 0.52 10.7 20.9 1.1 1 0 0 1 1 1 0 Fez1 OrsD PF12013.8 NODE_42722_length_473_cov_85.771689_g35092_i0reverse_frame_1 - 0.5 10.8 7.3 1.1 9.7 2.4 2.1 1 1 0 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D BLOC1_2 PF10046.9 NODE_42722_length_473_cov_85.771689_g35092_i0reverse_frame_1 - 1.2 9.5 12.3 0.64 10.4 10.1 1.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4407 PF14362.6 NODE_42722_length_473_cov_85.771689_g35092_i0reverse_frame_1 - 2.6 7.3 19.4 3.9 6.8 19.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Phage_GPO PF05929.11 NODE_42722_length_473_cov_85.771689_g35092_i0reverse_frame_1 - 2.8 7.5 18.8 3.6 7.1 18.8 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Erythro_esteras PF05139.14 NODE_42722_length_473_cov_85.771689_g35092_i0reverse_frame_1 - 6.2 6.5 12.2 8.9 6.0 11.9 1.3 1 1 0 1 1 1 0 Erythromycin esterase Toxin_28 PF08115.11 NODE_42710_length_473_cov_159.219178_g35080_i0forward_frame_1 - 0.8 9.6 6.6 1.1 9.2 2.3 2.3 2 0 0 2 2 2 0 SFI toxin family APH PF01636.23 NODE_42703_length_473_cov_345.888128_g35073_i0forward_frame_1 - 0.0014 18.6 0.0 0.0019 18.2 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 NODE_42703_length_473_cov_345.888128_g35073_i0forward_frame_1 - 0.025 14.0 0.0 0.034 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain DUF2340 PF10209.9 NODE_42698_length_473_cov_31315.958904_g331_i3forward_frame_1 - 0.017 15.6 0.6 2 8.9 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2340) IlvGEDA_leader PF08046.11 NODE_42694_length_474_cov_1.774487_g35068_i0forward_frame_1 - 0.3 10.6 4.3 0.31 10.5 0.4 2.3 2 0 0 2 2 2 0 IlvGEDA operon leader peptide Toxin_27 PF08099.11 NODE_42694_length_474_cov_1.774487_g35068_i0forward_frame_1 - 7.8 6.7 8.3 3.2 7.9 0.8 2.8 3 0 0 3 3 3 0 Scorpion calcine family RT_RNaseH_2 PF17919.1 NODE_42678_length_474_cov_3.988610_g35052_i0reverse_frame_1 - 3.3e-06 27.1 0.0 6.8e-06 26.0 0.0 1.5 1 1 0 1 1 1 1 RNase H-like domain found in reverse transcriptase RT_RNaseH PF17917.1 NODE_42678_length_474_cov_3.988610_g35052_i0reverse_frame_1 - 0.074 13.3 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 RNase H-like domain found in reverse transcriptase DUF1230 PF06799.11 NODE_42675_length_474_cov_75.038724_g35049_i0forward_frame_1 - 0.00027 21.0 0.0 0.00032 20.8 0.0 1.1 1 0 0 1 1 1 1 Conserved in the green lineage and diatoms 27 Phage_holin_3_6 PF07332.11 NODE_42675_length_474_cov_75.038724_g35049_i0forward_frame_1 - 0.02 14.9 0.5 0.12 12.4 0.1 2.0 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Chromate_transp PF02417.15 NODE_42675_length_474_cov_75.038724_g35049_i0forward_frame_1 - 0.035 14.2 0.6 0.048 13.8 0.6 1.3 1 1 0 1 1 1 0 Chromate transporter Herpes_UL79 PF03049.14 NODE_42674_length_474_cov_80.123007_g35048_i0forward_frame_1 - 0.087 12.5 5.4 0.1 12.3 5.4 1.1 1 0 0 1 1 1 0 UL79 family HTH_Crp_2 PF13545.6 NODE_42672_length_474_cov_82.191344_g35046_i0reverse_frame_1 - 0.17 11.9 0.0 0.29 11.2 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DUF2770 PF10968.8 NODE_42634_length_475_cov_2.075000_g35011_i0reverse_frame_2 - 0.046 13.7 0.4 0.071 13.1 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2770) P53_C PF11619.8 NODE_42633_length_475_cov_2.215909_g35010_i0reverse_frame_3 - 0.052 13.6 0.0 0.099 12.7 0.0 1.5 1 0 0 1 1 1 0 Transcription factor P53 - C terminal domain Molybdopterin PF00384.22 NODE_42632_length_475_cov_2.295455_g35009_i0reverse_frame_3 - 4.1e-50 171.0 0.2 4.6e-50 170.8 0.2 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Trehalose_PPase PF02358.16 NODE_42632_length_475_cov_2.295455_g35009_i0forward_frame_3 - 0.16 11.0 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase DUF3510 PF12022.8 NODE_42632_length_475_cov_2.295455_g35009_i0forward_frame_2 - 0.052 13.9 0.2 4.8 7.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3510) DUF241 PF03087.14 NODE_42629_length_475_cov_2.604545_g35006_i0reverse_frame_2 - 0.0084 16.0 1.0 0.01 15.7 1.0 1.2 1 0 0 1 1 1 1 Arabidopsis protein of unknown function Tom22 PF04281.13 NODE_42629_length_475_cov_2.604545_g35006_i0reverse_frame_2 - 1.3 8.8 5.6 2 8.2 5.2 1.7 1 1 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 Striatin PF08232.12 NODE_42629_length_475_cov_2.604545_g35006_i0reverse_frame_2 - 2.2 8.9 14.6 0.12 12.9 5.3 2.1 1 1 1 2 2 2 0 Striatin family DUF5381 PF17353.2 NODE_42629_length_475_cov_2.604545_g35006_i0forward_frame_2 - 1.5 8.6 10.0 0.063 13.0 4.2 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5381) Fig1 PF12351.8 NODE_42624_length_475_cov_3.547727_g35001_i0reverse_frame_2 - 0.036 14.0 2.1 0.054 13.4 2.1 1.3 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 DUF2024 PF09630.10 NODE_42621_length_475_cov_24.559091_g34998_i0reverse_frame_3 - 0.15 11.9 0.1 0.22 11.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) DUF5344 PF17279.2 NODE_42620_length_475_cov_39.775000_g34997_i0reverse_frame_3 - 0.022 15.3 0.7 0.037 14.6 0.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5344) KNOX2 PF03791.13 NODE_42620_length_475_cov_39.775000_g34997_i0reverse_frame_3 - 0.024 14.1 0.1 0.039 13.5 0.1 1.3 1 0 0 1 1 1 0 KNOX2 domain NPL PF17800.1 NODE_42618_length_475_cov_62.677273_g34995_i0reverse_frame_2 - 0.12 13.0 0.9 0.16 12.6 0.9 1.2 1 0 0 1 1 1 0 Nucleoplasmin-like domain DUF4073 PF13285.6 NODE_42618_length_475_cov_62.677273_g34995_i0reverse_frame_2 - 1.4 8.5 7.5 0.12 12.0 3.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4073) ABC_tran PF00005.27 NODE_42612_length_475_cov_78.727273_g34989_i0forward_frame_3 - 6.8e-08 33.1 0.0 1.2e-07 32.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 NODE_42612_length_475_cov_78.727273_g34989_i0forward_frame_3 - 0.0011 18.4 0.0 0.0015 18.0 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 NODE_42612_length_475_cov_78.727273_g34989_i0forward_frame_3 - 0.036 14.3 0.0 0.064 13.5 0.0 1.4 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Chorismate_synt PF01264.21 NODE_42603_length_475_cov_122.236364_g34980_i0reverse_frame_3 - 0.14 10.8 0.0 0.16 10.6 0.0 1.1 1 0 0 1 1 1 0 Chorismate synthase DUF2738 PF10927.8 NODE_42603_length_475_cov_122.236364_g34980_i0reverse_frame_3 - 0.19 10.8 0.0 0.25 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2738) zf-NF-X1 PF01422.17 NODE_42603_length_475_cov_122.236364_g34980_i0reverse_frame_2 - 0.5 10.5 0.3 0.5 10.5 0.3 3.9 4 0 0 4 4 4 0 NF-X1 type zinc finger Ank_2 PF12796.7 NODE_42603_length_475_cov_122.236364_g34980_i0forward_frame_3 - 8.1e-20 71.2 0.0 1e-13 51.6 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_42603_length_475_cov_122.236364_g34980_i0forward_frame_3 - 8.1e-18 64.0 0.1 0.00016 22.0 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 NODE_42603_length_475_cov_122.236364_g34980_i0forward_frame_3 - 1.1e-16 60.7 3.1 6.6e-07 29.5 0.1 3.6 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_42603_length_475_cov_122.236364_g34980_i0forward_frame_3 - 1.9e-13 50.6 0.0 1.3e-05 25.6 0.0 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_42603_length_475_cov_122.236364_g34980_i0forward_frame_3 - 1.5e-11 43.4 0.0 0.049 14.2 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat Cas9_Topo PF17894.1 NODE_42603_length_475_cov_122.236364_g34980_i0forward_frame_3 - 0.091 12.8 0.3 2 8.5 0.0 2.6 2 1 0 2 2 2 0 Topo homolgy domain in CRISPR-associated endonuclease Cas9 EccE PF11203.8 NODE_42603_length_475_cov_122.236364_g34980_i0forward_frame_3 - 0.49 10.7 5.8 3 8.2 3.0 2.3 1 1 1 2 2 2 0 Putative type VII ESX secretion system translocon, EccE Mito_carr PF00153.27 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_3 - 4.3e-09 36.2 0.1 4.3e-09 36.2 0.1 1.8 2 0 0 2 2 2 1 Mitochondrial carrier protein ETRAMP PF09716.10 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_3 - 3.8 7.7 12.7 6.2 7.0 12.7 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Mito_carr PF00153.27 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_2 - 8.2e-08 32.1 0.4 1.8e-07 30.9 0.4 1.9 1 1 0 1 1 1 1 Mitochondrial carrier protein HDA2-3 PF11496.8 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_2 - 0.033 13.3 6.2 0.95 8.6 4.0 2.0 1 1 1 2 2 2 0 Class II histone deacetylase complex subunits 2 and 3 FAM176 PF14851.6 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_2 - 0.04 13.6 0.2 0.84 9.3 0.0 2.1 2 0 0 2 2 2 0 FAM176 family DUF808 PF05661.12 NODE_42598_length_475_cov_172.988636_g34975_i0reverse_frame_2 - 0.18 10.8 0.3 0.24 10.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF808) PIP5K PF01504.18 NODE_42592_length_475_cov_306.809091_g34969_i1forward_frame_3 - 3.8e-16 59.1 0.7 5.9e-16 58.5 0.7 1.3 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase PIP5K PF01504.18 NODE_42591_length_475_cov_312.420455_g34969_i0forward_frame_3 - 3.8e-16 59.1 0.7 5.9e-16 58.5 0.7 1.3 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase zf-C2H2_7 PF15269.6 NODE_42587_length_475_cov_815.170455_g34965_i0forward_frame_3 - 0.024 14.7 0.1 0.024 14.7 0.1 2.9 3 0 0 3 3 3 0 Zinc-finger Myb_DNA-binding PF00249.31 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 6.8e-06 26.2 0.2 6.8e-06 26.2 0.2 1.8 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 5.2e-05 23.4 3.0 6.4e-05 23.1 1.8 1.8 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 0.0037 17.1 1.0 0.0067 16.3 1.0 1.4 1 0 0 1 1 1 1 Myb DNA-binding like SANT_DAMP1_like PF16282.5 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 0.011 15.9 0.9 0.06 13.5 0.5 2.3 1 1 1 2 2 2 0 SANT/Myb-like domain of DAMP1 Csm2_III-A PF03750.13 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 0.019 15.8 0.2 0.025 15.4 0.2 1.4 1 0 0 1 1 1 0 Csm2 Type III-A CPW_WPC PF09717.10 NODE_42577_length_476_cov_1.612245_g34959_i0forward_frame_3 - 0.15 13.1 2.2 0.47 11.5 2.2 2.1 1 1 0 1 1 1 0 Plasmodium falciparum domain of unknown function (CPW_WPC) MCPsignal PF00015.21 NODE_42572_length_476_cov_2.353741_g34954_i0forward_frame_3 - 4.5e-46 156.8 19.5 5.9e-46 156.4 11.9 2.1 2 0 0 2 2 2 2 Methyl-accepting chemotaxis protein (MCP) signalling domain Flu_M1_C PF08289.11 NODE_42572_length_476_cov_2.353741_g34954_i0forward_frame_3 - 2.8 8.2 12.1 12 6.2 6.2 3.0 1 1 2 3 3 3 0 Influenza Matrix protein (M1) C-terminal domain SPATA1_C PF15743.5 NODE_42569_length_476_cov_2.464853_g34951_i0reverse_frame_2 - 0.36 10.9 7.6 0.05 13.7 3.4 1.6 2 0 0 2 2 2 0 Spermatogenesis-associated C-terminus DUF1889 PF08986.10 NODE_42567_length_476_cov_2.580499_g34949_i0forward_frame_3 - 1.9e-66 221.9 1.0 2.3e-66 221.6 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1889) TT_ORF1 PF02956.14 NODE_42565_length_476_cov_2.825397_g34947_i0reverse_frame_2 - 8.8 4.9 19.6 12 4.4 19.6 1.3 1 0 0 1 1 1 0 TT viral orf 1 RPA43_OB PF17875.1 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_3 - 0.035 14.7 4.2 0.051 14.2 4.2 1.3 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I DAG_kinase_N PF14513.6 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_3 - 0.18 12.0 6.5 0.24 11.6 6.5 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus DUF4551 PF15087.6 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_3 - 0.86 8.4 8.2 0.91 8.3 8.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) PPL5 PF18168.1 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_3 - 1.3 8.3 8.9 1.5 8.1 8.9 1.1 1 0 0 1 1 1 0 Prim-pol family 5 Ly49 PF08391.10 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_3 - 1.6 9.1 7.5 2.4 8.6 7.5 1.2 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region NPR3 PF03666.13 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_3 - 2 7.1 13.0 2.1 7.0 13.0 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 RNA_polI_A34 PF08208.11 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_3 - 4.4 7.3 29.7 6.1 6.9 29.7 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Presenilin PF01080.17 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_3 - 4.8 5.9 6.0 5 5.8 6.0 1.0 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_2 - 6.9 4.8 7.0 8.3 4.6 7.0 1.0 1 0 0 1 1 1 0 CDC45-like protein CobT PF06213.12 NODE_42561_length_476_cov_66.981859_g34943_i0forward_frame_2 - 7.4 5.9 12.7 10 5.4 12.7 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT DUF5381 PF17353.2 NODE_42559_length_476_cov_71.716553_g34941_i0reverse_frame_2 - 0.25 11.1 4.3 0.41 10.4 4.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5381) PRELI PF04707.14 NODE_42559_length_476_cov_71.716553_g34941_i0forward_frame_3 - 0.00033 20.5 0.3 0.00048 20.0 0.3 1.2 1 0 0 1 1 1 1 PRELI-like family Lip_prot_lig_C PF10437.9 NODE_42559_length_476_cov_71.716553_g34941_i0forward_frame_3 - 0.1 12.6 0.8 0.57 10.2 0.1 2.1 2 0 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus TP2 PF01254.18 NODE_42557_length_476_cov_85.043084_g34939_i0reverse_frame_2 - 3.5 8.2 18.8 5.8 7.5 18.8 1.3 1 0 0 1 1 1 0 Nuclear transition protein 2 Lipoxygenase PF00305.19 NODE_42557_length_476_cov_85.043084_g34939_i0forward_frame_2 - 0.061 11.7 0.0 0.067 11.6 0.0 1.0 1 0 0 1 1 1 0 Lipoxygenase Tudor_3 PF18115.1 NODE_42555_length_476_cov_93.612245_g34937_i0reverse_frame_2 - 0.071 13.0 0.2 0.1 12.5 0.2 1.3 1 0 0 1 1 1 0 DNA repair protein Crb2 Tudor domain DUF5615 PF18480.1 NODE_42555_length_476_cov_93.612245_g34937_i0forward_frame_2 - 0.00017 21.2 0.2 0.00042 20.0 0.2 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF5615) Mut7-C PF01927.16 NODE_42555_length_476_cov_93.612245_g34937_i0forward_frame_2 - 0.00073 19.7 0.1 0.0012 19.0 0.1 1.3 1 1 0 1 1 1 1 Mut7-C RNAse domain DUF2171 PF09939.9 NODE_42555_length_476_cov_93.612245_g34937_i0forward_frame_2 - 0.13 12.5 0.4 3.6 7.9 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2171) FAD_binding_7 PF03441.14 NODE_42551_length_476_cov_113.730159_g34933_i0forward_frame_2 - 1.8e-31 109.2 0.0 2.4e-31 108.8 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase MIF4G_like PF09088.11 NODE_42551_length_476_cov_113.730159_g34933_i0forward_frame_2 - 0.022 14.6 0.3 0.031 14.0 0.3 1.2 1 0 0 1 1 1 0 MIF4G like PRKCSH_1 PF13015.6 NODE_42548_length_476_cov_130.133787_g34930_i0reverse_frame_3 - 0.15 11.7 0.4 0.19 11.4 0.4 1.1 1 0 0 1 1 1 0 Glucosidase II beta subunit-like protein 2OG-FeII_Oxy_4 PF13661.6 NODE_42548_length_476_cov_130.133787_g34930_i0forward_frame_3 - 6.5e-14 52.4 0.0 9.5e-14 51.8 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_3 PF13640.6 NODE_42548_length_476_cov_130.133787_g34930_i0forward_frame_3 - 2.6e-12 47.5 0.0 3.6e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily HEAT PF02985.22 NODE_42545_length_476_cov_138.068027_g34927_i0reverse_frame_3 - 0.061 13.6 0.1 0.17 12.2 0.1 1.8 1 0 0 1 1 1 0 HEAT repeat TSGP1 PF07771.11 NODE_42542_length_476_cov_166.816327_g34924_i0reverse_frame_2 - 0.033 14.3 0.1 0.033 14.3 0.1 1.9 2 0 0 2 2 2 0 Tick salivary peptide group 1 TAXi_N PF14543.6 NODE_42542_length_476_cov_166.816327_g34924_i0reverse_frame_2 - 3.9 7.7 14.9 0.25 11.6 2.2 2.1 1 1 1 2 2 2 0 Xylanase inhibitor N-terminal DUF3102 PF11300.8 NODE_42539_length_476_cov_178.176871_g34921_i0forward_frame_3 - 0.096 12.9 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3102) DUF3835 PF12927.7 NODE_42539_length_476_cov_178.176871_g34921_i0forward_frame_2 - 0.67 10.9 4.4 1.8 9.5 4.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3835) DUF3899 PF13038.6 NODE_42539_length_476_cov_178.176871_g34921_i0forward_frame_2 - 1 9.9 0.1 1 9.9 0.1 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3899) DNA_pol_phi PF04931.13 NODE_42536_length_476_cov_244.018141_g34918_i0reverse_frame_3 - 3.1 5.8 37.2 4.3 5.3 37.2 1.1 1 0 0 1 1 1 0 DNA polymerase phi MerC PF03203.14 NODE_42536_length_476_cov_244.018141_g34918_i0forward_frame_2 - 1.7 9.1 13.0 2.1 8.8 11.4 2.0 1 1 1 2 2 2 0 MerC mercury resistance protein DUF4407 PF14362.6 NODE_42533_length_476_cov_305.582766_g34915_i0reverse_frame_3 - 0.28 10.5 3.8 0.36 10.1 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FUSC PF04632.12 NODE_42533_length_476_cov_305.582766_g34915_i0reverse_frame_3 - 0.28 9.7 3.3 0.33 9.4 3.3 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family CENP-H PF05837.12 NODE_42533_length_476_cov_305.582766_g34915_i0reverse_frame_3 - 1.5 9.2 8.3 2.7 8.4 1.7 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DUF3678 PF12435.8 NODE_42533_length_476_cov_305.582766_g34915_i0forward_frame_3 - 6.8 6.2 7.9 0.41 10.1 2.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) PUMA PF15826.5 NODE_42529_length_476_cov_451.437642_g34911_i0forward_frame_2 - 0.0049 17.1 0.8 0.55 10.4 0.4 2.2 2 0 0 2 2 2 2 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis XhoI PF04555.13 NODE_42515_length_477_cov_1.703620_g34901_i0reverse_frame_2 - 0.0005 20.0 0.1 0.0007 19.6 0.1 1.2 1 0 0 1 1 1 1 Restriction endonuclease XhoI RhoGEF PF00621.20 NODE_42510_length_477_cov_2.323529_g34896_i0reverse_frame_3 - 0.093 13.0 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 RhoGEF domain Pertussis_S2S3 PF02918.15 NODE_42508_length_477_cov_2.622172_g34894_i0reverse_frame_3 - 0.021 14.8 0.4 0.12 12.4 0.4 1.9 2 0 0 2 2 2 0 Pertussis toxin, subunit 2 and 3, C-terminal domain UPF0564 PF10595.9 NODE_42500_length_477_cov_4.357466_g34886_i0reverse_frame_3 - 3e-07 29.8 2.7 3.4e-07 29.7 2.7 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0564 DUF963 PF06131.11 NODE_42498_length_477_cov_14.128959_g34884_i0reverse_frame_3 - 7.4 6.1 30.9 1.2 8.7 24.7 2.6 2 1 0 2 2 2 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) ASD1 PF08688.10 NODE_42492_length_477_cov_52.554299_g34878_i0forward_frame_3 - 0.024 15.0 1.9 0.033 14.6 1.9 1.3 1 0 0 1 1 1 0 Apx/Shroom domain ASD1 SinI PF08671.10 NODE_42482_length_477_cov_80.909502_g34868_i0reverse_frame_2 - 0.15 11.9 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Anti-repressor SinI LolB PF03550.14 NODE_42481_length_477_cov_81.165158_g34867_i0reverse_frame_3 - 0.052 13.6 0.2 0.078 13.0 0.2 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein LolB RAP1 PF07218.11 NODE_42481_length_477_cov_81.165158_g34867_i0reverse_frame_2 - 3.4 5.8 3.3 3.6 5.7 3.3 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) ALS2CR8 PF15299.6 NODE_42480_length_477_cov_86.952489_g34866_i0reverse_frame_2 - 0.017 15.0 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 PPR_3 PF13812.6 NODE_42479_length_477_cov_87.520362_g34865_i0reverse_frame_3 - 2.7e-07 30.6 0.0 0.00095 19.2 0.0 2.5 2 1 1 3 3 3 2 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_42479_length_477_cov_87.520362_g34865_i0reverse_frame_3 - 2.6e-06 27.5 0.0 0.0018 18.4 0.0 2.5 2 1 1 3 3 3 2 PPR repeat family PPR PF01535.20 NODE_42479_length_477_cov_87.520362_g34865_i0reverse_frame_3 - 0.00037 20.6 0.0 0.13 12.6 0.0 3.2 4 0 0 4 4 4 1 PPR repeat PPR_long PF17177.4 NODE_42479_length_477_cov_87.520362_g34865_i0reverse_frame_3 - 0.084 12.2 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP FAST_1 PF06743.15 NODE_42475_length_477_cov_101.572398_g34861_i0forward_frame_2 - 4.4e-10 39.4 1.0 0.017 15.0 0.1 3.9 1 1 3 4 4 4 3 FAST kinase-like protein, subdomain 1 GSCFA PF08885.11 NODE_42475_length_477_cov_101.572398_g34861_i0forward_frame_2 - 0.00066 19.4 0.3 0.001 18.8 0.2 1.3 2 0 0 2 2 2 1 GSCFA family DUF1601 PF07671.11 NODE_42475_length_477_cov_101.572398_g34861_i0forward_frame_2 - 0.13 12.1 0.9 18 5.3 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1601) RRM_1 PF00076.22 NODE_42470_length_477_cov_114.570136_g34856_i0forward_frame_2 - 0.00013 21.7 0.0 0.00019 21.2 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF5340 PF17275.2 NODE_42465_length_477_cov_132.968326_g34851_i0forward_frame_2 - 0.15 12.2 0.1 0.26 11.5 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5340) GREB1 PF15782.5 NODE_42464_length_477_cov_138.651584_g34850_i0reverse_frame_2 - 0.42 7.7 1.9 0.5 7.4 1.9 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer CbiN PF02553.15 NODE_42464_length_477_cov_138.651584_g34850_i0forward_frame_3 - 0.035 14.1 0.2 0.073 13.1 0.1 1.6 1 1 0 1 1 1 0 Cobalt transport protein component CbiN TRAP_alpha PF03896.16 NODE_42464_length_477_cov_138.651584_g34850_i0forward_frame_3 - 0.09 12.0 0.6 0.12 11.6 0.6 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Prenyltrans PF00432.21 NODE_42464_length_477_cov_138.651584_g34850_i0forward_frame_3 - 0.12 12.1 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat Nucleoside_tran PF01733.18 NODE_42464_length_477_cov_138.651584_g34850_i0forward_frame_3 - 0.16 11.4 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Nucleoside transporter G0-G1_switch_2 PF15103.6 NODE_42464_length_477_cov_138.651584_g34850_i0forward_frame_3 - 0.46 10.9 1.7 1 9.8 1.7 1.5 1 1 0 1 1 1 0 G0/G1 switch protein 2 CRAL_TRIO PF00650.20 NODE_42463_length_477_cov_159.497738_g34849_i0forward_frame_3 - 0.044 13.5 0.0 0.062 13.0 0.0 1.3 1 1 0 1 1 1 0 CRAL/TRIO domain DUF2516 PF10724.9 NODE_42463_length_477_cov_159.497738_g34849_i0forward_frame_2 - 0.25 11.6 2.6 0.39 11.0 2.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2516) TraP PF07296.11 NODE_42462_length_477_cov_179.710407_g34848_i0reverse_frame_3 - 0.094 11.9 0.3 0.18 11.0 0.0 1.6 2 1 0 2 2 2 0 TraP protein TPR_10 PF13374.6 NODE_42462_length_477_cov_179.710407_g34848_i0forward_frame_3 - 1.9 8.5 4.1 2.9 7.9 1.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat eIF3_subunit PF08597.10 NODE_42453_length_477_cov_323.545249_g34064_i1forward_frame_3 - 0.0019 18.1 4.5 0.0026 17.7 4.5 1.2 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit DUF5340 PF17275.2 NODE_42453_length_477_cov_323.545249_g34064_i1forward_frame_3 - 0.18 12.0 3.2 0.4 10.9 3.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5340) PI3K_P85_iSH2 PF16454.5 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.0046 16.6 3.8 0.008 15.8 2.9 1.8 1 1 1 2 2 2 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4407 PF14362.6 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.0088 15.4 0.4 0.0091 15.4 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) GIT_CC PF16559.5 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.0092 15.8 0.4 0.019 14.8 0.4 1.5 1 0 0 1 1 1 1 GIT coiled-coil Rho guanine nucleotide exchange factor MscS_porin PF12795.7 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.01 15.4 0.4 0.01 15.4 0.4 1.5 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain BLOC1_2 PF10046.9 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.013 15.8 1.9 1.5 9.1 0.4 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FapA PF03961.13 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.017 13.8 1.8 0.02 13.5 1.8 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A ABC_tran_CTD PF16326.5 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.027 14.7 3.3 0.028 14.7 1.0 2.1 2 0 0 2 2 2 0 ABC transporter C-terminal domain DUF2730 PF10805.8 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.03 14.4 0.7 0.3 11.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) LPP PF04728.13 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.034 14.6 1.5 0.063 13.7 1.5 1.4 1 0 0 1 1 1 0 Lipoprotein leucine-zipper ZapB PF06005.12 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.043 14.3 4.8 0.043 14.3 4.8 1.7 2 0 0 2 2 2 0 Cell division protein ZapB FlaC_arch PF05377.11 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.083 13.3 5.5 0.92 9.9 0.6 2.6 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) IFP_35_N PF07334.13 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.21 11.7 5.1 2.5 8.2 3.2 2.4 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus XhlA PF10779.9 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 0.54 10.5 3.7 0.25 11.6 0.8 1.9 2 0 0 2 2 2 0 Haemolysin XhlA Chitin_synth_1 PF01644.17 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 1.1 9.2 7.3 0.48 10.4 5.2 1.7 1 1 1 2 2 2 0 Chitin synthase DivIC PF04977.15 NODE_42446_length_477_cov_4979.380090_g34833_i0reverse_frame_3 - 1.5 8.6 8.3 0.96 9.3 5.0 2.3 2 1 0 2 2 2 0 Septum formation initiator ESR1_C PF12743.7 NODE_42443_length_477_cov_134218.723982_g34831_i0reverse_frame_3 - 0.21 11.4 0.9 0.35 10.7 0.9 1.2 1 0 0 1 1 1 0 Oestrogen-type nuclear receptor final C-terminal CDC73_C PF05179.14 NODE_42443_length_477_cov_134218.723982_g34831_i0forward_frame_3 - 0.0073 16.0 0.1 0.011 15.4 0.1 1.2 1 0 0 1 1 1 1 RNA pol II accessory factor, Cdc73 family, C-terminal DUF1859 PF08948.10 ORF99430 - 0.1 12.5 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1859) REV PF00424.18 ORF9877 - 0.12 12.4 2.2 1.9 8.6 0.8 2.3 2 0 0 2 2 2 0 REV protein (anti-repression trans-activator protein) Baculo_VP1054 PF05789.11 ORF9877 - 1.2 8.3 2.1 1.5 8.0 2.1 1.1 1 0 0 1 1 1 0 Baculovirus VP1054 protein DUF3678 PF12435.8 ORF98341 - 0.56 9.6 3.7 14 5.2 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) CorA PF01544.18 ORF98323 - 0.018 14.3 0.4 0.021 14.2 0.4 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF4201 PF13870.6 ORF98323 - 0.033 13.9 1.4 0.057 13.2 1.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) Dzip-like_N PF13815.6 ORF98323 - 0.038 14.0 0.4 0.052 13.5 0.4 1.3 1 0 0 1 1 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal FHA_2 PF17913.1 ORF98323 - 0.039 14.2 0.1 0.072 13.3 0.1 1.5 1 0 0 1 1 1 0 FHA domain DMPK_coil PF08826.10 ORF98323 - 0.059 13.5 1.0 0.37 10.9 0.7 2.1 2 0 0 2 2 2 0 DMPK coiled coil domain like TFIID_20kDa PF03847.13 ORF98323 - 0.15 12.6 2.1 1.3 9.6 2.1 2.4 1 1 0 1 1 1 0 Transcription initiation factor TFIID subunit A CM2 PF03021.14 ORF97865 - 0.0036 17.1 0.2 0.0049 16.7 0.2 1.2 1 0 0 1 1 1 1 Influenza C virus M2 protein Utp13 PF08625.11 ORF96642 - 0.064 13.2 0.0 3.7 7.4 0.0 2.1 2 0 0 2 2 2 0 Utp13 specific WD40 associated domain DUF1995 PF09353.10 ORF96632 - 0.05 13.6 0.1 0.058 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1995) Acetyltransf_1 PF00583.25 ORF96341 - 2e-13 50.6 0.1 2.9e-13 50.1 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF96341 - 3.3e-10 40.0 0.0 4.9e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF96341 - 5.2e-09 35.9 0.0 8e-09 35.4 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 ORF96341 - 1.5e-08 35.0 0.0 2.2e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF96341 - 0.0014 18.8 0.0 0.002 18.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF96341 - 0.0018 19.0 0.0 0.0028 18.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF96341 - 0.016 15.3 0.0 0.023 14.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain CRM1_repeat_3 PF18787.1 ORF951 - 0.062 13.4 0.7 0.31 11.2 0.3 2.1 2 0 0 2 2 2 0 CRM1 / Exportin repeat 3 Ribosomal_L12 PF00542.19 ORF9486 - 0.0009 19.5 0.1 0.002 18.4 0.1 1.6 1 0 0 1 1 1 1 Ribosomal protein L7/L12 C-terminal domain ArnB_C PF18677.1 ORF93123 - 0.036 14.2 0.4 0.036 14.2 0.4 1.5 2 0 0 2 2 2 0 Archaellum regulatory network B, C-terminal domain WD40 PF00400.32 ORF91847 - 2e-05 25.2 0.2 0.00023 21.9 0.0 2.4 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF91847 - 0.12 12.7 0.0 0.34 11.3 0.0 1.7 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain ArfGap PF01412.18 ORF91764 - 1.2e-33 115.6 0.6 1.5e-33 115.4 0.6 1.1 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf Zn_Tnp_IS1595 PF12760.7 ORF91764 - 0.045 13.7 0.4 0.071 13.1 0.4 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-C3HC4_3 PF13920.6 ORF91764 - 0.17 11.7 2.8 0.27 11.1 2.8 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Paired_CXXCH_1 PF09699.10 ORF91764 - 0.63 9.8 3.3 1.6 8.6 0.3 2.4 1 1 1 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) Sugar_tr PF00083.24 ORF89906 - 2.3e-15 56.4 20.5 2.5e-15 56.3 20.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF89906 - 2.1 7.2 15.7 0.37 9.7 11.8 1.6 1 1 0 1 1 1 0 Major Facilitator Superfamily BAR_3_WASP_bdg PF10456.9 ORF88774 - 0.0015 18.0 0.5 0.0034 16.9 0.2 1.6 1 1 0 2 2 2 1 WASP-binding domain of Sorting nexin protein Prefoldin_2 PF01920.20 ORF88774 - 0.18 11.8 4.4 0.13 12.2 1.8 1.9 2 0 0 2 2 2 0 Prefoldin subunit GP4 PF03010.14 ORF86446 - 0.12 12.3 2.1 0.22 11.4 2.1 1.3 1 0 0 1 1 1 0 GP4 PD40 PF07676.12 ORF85630 - 0.11 12.5 3.8 0.35 10.9 0.6 2.4 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat Mago_nashi PF02792.14 ORF8493 - 2.1e-64 215.9 1.9 2.4e-64 215.8 1.9 1.0 1 0 0 1 1 1 1 Mago nashi protein Lipoprotein_9 PF03180.14 ORF83499 - 1.7e-59 200.8 0.0 1.9e-59 200.7 0.0 1.0 1 0 0 1 1 1 1 NLPA lipoprotein PTSIIB_sorb PF03830.15 ORF83022 - 1.8e-48 164.5 0.4 2e-48 164.4 0.4 1.0 1 0 0 1 1 1 1 PTS system sorbose subfamily IIB component zf-RanBP PF00641.18 ORF80541 - 0.00067 18.9 1.6 0.00067 18.9 1.6 4.3 3 1 0 3 3 3 1 Zn-finger in Ran binding protein and others DUF2689 PF10894.8 ORF79180 - 0.093 12.5 0.5 0.19 11.6 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2689) DUF4064 PF13273.6 ORF79109 - 0.062 13.6 0.1 0.094 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) ERGIC_N PF13850.6 ORF79109 - 0.065 13.6 0.1 0.1 12.9 0.1 1.4 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) MSP1a PF11670.8 ORF79109 - 0.13 11.5 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) Med3 PF11593.8 ORF78994 - 2.9 7.0 8.4 3.3 6.8 8.4 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal UK PF02512.14 ORF77892 - 0.11 13.1 0.1 0.22 12.0 0.1 1.5 1 0 0 1 1 1 0 Virulence determinant DUF4703 PF15775.5 ORF76520 - 0.15 11.8 0.2 0.15 11.8 0.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4703) Mvb12 PF09452.10 ORF75593 - 0.015 15.8 0.1 0.25 11.8 0.1 2.1 1 1 0 1 1 1 0 ESCRT-I subunit Mvb12 DUF4736 PF15883.5 ORF75177 - 0.34 10.6 2.5 0.74 9.5 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4736) CHCH PF06747.13 ORF73500 - 0.0064 16.6 11.5 0.19 11.9 4.2 3.0 3 0 0 3 3 3 2 CHCH domain CX9C PF16860.5 ORF73500 - 0.089 12.8 4.8 0.22 11.6 0.1 2.7 4 0 0 4 4 4 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, EF-hand_6 PF13405.6 ORF73291 - 2e-05 24.2 0.5 0.00032 20.4 0.0 2.7 3 0 0 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 ORF73291 - 0.00091 19.6 0.1 0.053 14.0 0.1 2.4 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF73291 - 0.001 18.4 0.0 0.0043 16.5 0.0 2.1 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF73291 - 0.14 11.7 0.0 0.33 10.5 0.0 1.7 1 0 0 1 1 1 0 EF hand EF-hand_8 PF13833.6 ORF73291 - 0.18 11.7 0.1 6.2 6.8 0.0 2.6 2 1 0 2 2 2 0 EF-hand domain pair VirB3 PF05101.13 ORF72521 - 0.071 13.3 4.9 7.5 6.9 2.6 2.6 2 1 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein MHYT PF03707.16 ORF72521 - 0.071 13.3 0.8 0.071 13.3 0.8 2.0 2 1 0 2 2 2 0 Bacterial signalling protein N terminal repeat VKG_Carbox PF05090.14 ORF72521 - 0.65 8.8 6.8 0.83 8.4 6.7 1.3 1 1 0 1 1 1 0 Vitamin K-dependent gamma-carboxylase 2TM PF13239.6 ORF72521 - 0.93 9.8 5.3 4 7.8 0.5 2.3 2 0 0 2 2 2 0 2TM domain DHHC PF01529.20 ORF72521 - 6.6 6.8 13.5 0.29 11.2 5.5 2.1 1 1 1 2 2 2 0 DHHC palmitoyltransferase NCD3G PF07562.14 ORF72235 - 0.021 14.8 2.8 0.021 14.8 2.8 1.7 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR Tenui_NS3 PF05310.12 ORF70492 - 0.061 13.4 0.3 0.074 13.2 0.3 1.1 1 0 0 1 1 1 0 Tenuivirus movement protein GPP34 PF05719.11 ORF70258 - 0.00064 19.8 0.5 0.00076 19.6 0.5 1.1 1 0 0 1 1 1 1 Golgi phosphoprotein 3 (GPP34) Mago_nashi PF02792.14 ORF698 - 2.1e-64 215.9 1.9 2.4e-64 215.8 1.9 1.0 1 0 0 1 1 1 1 Mago nashi protein CutA1 PF03091.15 ORF69372 - 1e-13 51.0 0.2 1.4e-13 50.5 0.2 1.1 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein CATSPERB PF15149.6 ORF69058 - 0.27 9.7 0.1 0.37 9.3 0.1 1.1 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit beta protein family SLC12 PF03522.15 ORF674 - 6e-06 25.5 3.8 1.8e-05 23.9 3.9 1.7 1 1 0 1 1 1 1 Solute carrier family 12 UPF0020 PF01170.18 ORF674 - 0.0035 17.0 0.3 0.0044 16.7 0.3 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 BRAP2 PF07576.12 ORF674 - 0.03 14.5 0.3 0.069 13.4 0.0 1.7 2 0 0 2 2 2 0 BRCA1-associated protein 2 MAM PF00629.23 ORF66951 - 0.032 14.2 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 MAM domain, meprin/A5/mu # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks159.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks159.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks159.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks159.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RICTOR_V PF14668.6 ORF38645 - 2.2e-23 82.3 0.1 2.2e-23 82.3 0.1 3.0 4 0 0 4 4 4 1 Rapamycin-insensitive companion of mTOR, domain 5 RasGEF_N_2 PF14663.6 ORF38645 - 2.6e-12 47.1 1.0 7.1e-11 42.5 0.1 2.6 2 0 0 2 2 2 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain Peptidase_S46 PF10459.9 ORF26429 - 1.4e-128 430.5 0.0 1.6e-128 430.3 0.0 1.0 1 0 0 1 1 1 1 Peptidase S46 Trypsin_2 PF13365.6 ORF26429 - 2.8e-06 28.3 0.1 0.00048 21.1 0.0 2.3 2 0 0 2 2 2 1 Trypsin-like peptidase domain DUF31 PF01732.16 ORF26429 - 0.0011 18.6 0.1 0.0086 15.7 0.0 1.9 2 0 0 2 2 2 1 Putative peptidase (DUF31) Trypsin PF00089.26 ORF26429 - 0.01 15.7 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Trypsin Peptidase_S7 PF00949.21 ORF26429 - 0.016 15.0 0.0 0.041 13.7 0.0 1.6 2 0 0 2 2 2 0 Peptidase S7, Flavivirus NS3 serine protease Peptidase_S32 PF05579.13 ORF26429 - 0.14 11.3 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 Equine arteritis virus serine endopeptidase S32 Pkinase PF00069.25 ORF150284 - 2.5e-63 213.9 1.0 1.2e-62 211.6 0.0 2.2 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF150284 - 2.6e-43 148.2 0.2 5.5e-43 147.1 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF150284 - 4.4e-09 36.1 0.0 1e-08 34.9 0.0 1.7 1 0 0 1 1 1 1 Kinase-like ORF6N PF10543.9 ORF150284 - 0.88 9.8 5.3 0.56 10.4 0.1 2.9 3 0 0 3 3 3 0 ORF6N domain MIG-14_Wnt-bd PF06664.12 ORF137621 - 6.4e-37 127.4 39.1 6.4e-37 127.4 39.1 1.4 2 0 0 2 2 2 1 Wnt-binding factor required for Wnt secretion DUF2207 PF09972.9 ORF137621 - 0.035 12.9 4.5 3.4 6.3 0.0 3.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) FtsJ PF01728.19 ORF130437 - 6.2e-06 26.4 0.0 1.2e-05 25.5 0.0 1.7 1 1 0 1 1 1 1 FtsJ-like methyltransferase MORN PF02493.20 ORF127663 - 2.3e-06 27.2 44.5 0.0014 18.4 1.6 7.0 7 0 0 7 7 7 4 MORN repeat CDC45 PF02724.14 ORF127663 - 0.27 9.5 13.2 0.39 9.0 13.2 1.2 1 0 0 1 1 1 0 CDC45-like protein LPP PF04728.13 ORF112320 - 0.6 10.6 3.2 5.1 7.6 0.1 3.3 2 1 0 2 2 2 0 Lipoprotein leucine-zipper OmpH PF03938.14 ORF112320 - 1.7 9.0 21.0 0.055 13.8 1.0 3.5 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) TMF_TATA_bd PF12325.8 ORF112320 - 4.4 7.5 22.7 0.98 9.7 5.5 3.3 3 0 0 3 3 3 0 TATA element modulatory factor 1 TATA binding FapA PF03961.13 ORF112320 - 7.6 5.0 13.7 2.1 6.9 3.7 2.6 2 0 0 2 2 2 0 Flagellar Assembly Protein A YfhD PF14151.6 ORF106835 - 0.4 10.9 2.5 0.75 10.0 2.5 1.4 1 0 0 1 1 1 0 YfhD-like protein DUF2931 PF11153.8 NODE_5069_length_1721_cov_411.481613_g3293_i1forward_frame_1 - 0.17 11.6 0.1 0.29 10.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) BTB_2 PF02214.22 ORF87378 - 7.8e-05 23.0 0.0 0.00017 21.9 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain DcpS_C PF11969.8 ORF87378 - 0.0033 17.9 0.1 0.0073 16.8 0.1 1.5 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CALCOCO1 PF07888.11 ORF53163 - 0.0027 16.6 13.5 0.0027 16.6 13.5 2.3 1 1 1 2 2 2 1 Calcium binding and coiled-coil domain (CALCOCO1) like GAS PF13851.6 ORF53163 - 0.0057 16.0 16.9 0.0057 16.0 16.9 3.5 1 1 1 3 3 3 1 Growth-arrest specific micro-tubule binding Exonuc_VII_S PF02609.16 ORF53163 - 0.055 13.5 0.3 0.055 13.5 0.3 3.3 4 0 0 4 4 4 0 Exonuclease VII small subunit Ribosomal_L13 PF00572.18 ORF53163 - 0.066 13.5 1.3 0.099 12.9 0.3 1.9 2 0 0 2 2 2 0 Ribosomal protein L13 Csm2_III-A PF03750.13 ORF53163 - 5.2 7.9 15.4 0.094 13.6 2.1 3.0 2 1 0 2 2 2 0 Csm2 Type III-A TMCO5 PF14992.6 ORF53163 - 6.5 6.2 41.6 0.59 9.7 16.3 3.5 1 1 2 3 3 3 0 TMCO5 family Fib_alpha PF08702.10 ORF53163 - 7.2 6.8 33.9 6.7 6.9 9.3 4.0 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family ATP-grasp_5 PF13549.6 ORF35861 - 5.9e-80 267.9 0.1 8.9e-80 267.3 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain Acetyltransf_1 PF00583.25 ORF35861 - 2e-08 34.5 0.0 3.6e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF35861 - 0.00014 22.2 0.0 0.00039 20.8 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF35861 - 0.0022 17.9 0.0 0.0049 16.8 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 ORF35861 - 0.003 17.5 0.0 0.03 14.3 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain ATP-grasp_2 PF08442.10 ORF35861 - 0.0037 16.9 0.0 0.0087 15.6 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 ORF35861 - 0.032 13.7 1.3 0.18 11.2 0.0 2.2 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Acetyltransf_4 PF13420.7 ORF35861 - 0.078 13.1 0.0 0.38 10.9 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain WD40 PF00400.32 ORF14648 - 4.5e-10 40.0 0.4 0.84 10.6 0.0 5.8 6 0 0 6 6 6 4 WD domain, G-beta repeat Nup160 PF11715.8 ORF14648 - 0.00034 19.4 0.0 0.67 8.5 0.0 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 PQQ_2 PF13360.6 ORF14648 - 0.0046 16.6 0.6 0.18 11.4 0.0 2.5 2 1 0 2 2 2 1 PQQ-like domain RSN1_7TM PF02714.15 ORF123579 - 0.0018 17.6 2.3 0.0018 17.6 2.3 2.7 3 0 0 3 3 3 2 Calcium-dependent channel, 7TM region, putative phosphate Anoctamin PF04547.12 ORF123579 - 0.64 8.8 15.1 0.0098 14.8 7.7 1.7 2 0 0 2 2 2 0 Calcium-activated chloride channel TMEM52 PF14979.6 ORF123579 - 0.99 9.3 5.0 7.4 6.5 4.7 2.3 2 0 0 2 2 2 0 Transmembrane 52 Peptidase_M14 PF00246.24 ORF122079 - 1.5e-43 149.6 0.1 2.2e-43 149.1 0.1 1.2 1 0 0 1 1 1 1 Zinc carboxypeptidase Rax2 PF12768.7 ORF122079 - 0.0014 18.1 0.6 0.2 11.1 0.3 2.5 2 0 0 2 2 2 2 Cortical protein marker for cell polarity Amnionless PF14828.6 ORF122079 - 0.052 12.4 0.1 0.2 10.5 0.0 1.8 2 0 0 2 2 2 0 Amnionless LRR19-TM PF15176.6 ORF122079 - 0.16 11.9 1.4 0.56 10.2 1.4 1.9 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain SUR7 PF06687.12 ORF122079 - 0.19 11.3 6.9 0.59 9.7 3.9 2.4 2 0 0 2 2 2 0 SUR7/PalI family DHHC PF01529.20 ORF114598 - 1.4e-28 99.7 16.1 6.8e-28 97.4 10.4 2.3 2 0 0 2 2 2 2 DHHC palmitoyltransferase DUF639 PF04842.12 ORF114598 - 0.009 15.5 0.2 0.023 14.1 0.2 1.6 1 0 0 1 1 1 1 Plant protein of unknown function (DUF639) DUF1282 PF06930.12 ORF114598 - 0.05 13.4 0.1 0.05 13.4 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1282) STT3 PF02516.14 ORF114598 - 2.1 7.1 9.4 0.031 13.2 1.0 1.9 2 0 0 2 2 2 0 Oligosaccharyl transferase STT3 subunit Connexin PF00029.19 ORF114598 - 2.6 7.7 18.9 4 7.1 0.0 3.9 3 1 0 3 3 3 0 Connexin Ctr PF04145.15 ORF114598 - 5 7.7 0.0 5 7.7 0.0 3.7 2 1 0 2 2 2 0 Ctr copper transporter family AFG1_ATPase PF03969.16 ORF77556 - 3.4e-91 305.8 0.1 6.4e-91 304.9 0.1 1.4 1 1 0 1 1 1 1 AFG1-like ATPase EF-hand_7 PF13499.6 ORF77556 - 3.6e-08 33.8 2.7 3.6e-08 33.8 2.7 2.1 2 0 0 2 2 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF77556 - 1.9e-07 30.2 1.0 0.0027 17.2 0.2 2.9 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF77556 - 9.6e-07 28.3 0.2 0.0025 17.6 0.1 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF77556 - 8.8e-06 25.5 0.3 0.016 15.1 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair Bac_DnaA PF00308.18 ORF77556 - 0.0012 18.7 1.5 0.047 13.5 0.1 3.3 3 1 0 3 3 3 1 Bacterial dnaA protein DUF2076 PF09849.9 ORF77556 - 0.0015 18.6 0.0 0.0028 17.8 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) AAA_22 PF13401.6 ORF77556 - 0.0032 17.7 0.1 0.1 12.9 0.0 2.6 2 0 0 2 2 2 1 AAA domain EF-hand_5 PF13202.6 ORF77556 - 0.0035 16.8 0.1 0.19 11.3 0.0 2.5 2 0 0 2 2 2 1 EF hand AAA_5 PF07728.14 ORF77556 - 0.0046 17.0 0.2 0.014 15.4 0.0 2.0 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) ResIII PF04851.15 ORF77556 - 0.0081 16.2 0.0 0.017 15.1 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_16 PF13191.6 ORF77556 - 0.05 14.0 0.1 1.2 9.5 0.0 2.5 2 1 0 2 2 2 0 AAA ATPase domain T2SSE PF00437.20 ORF77556 - 0.065 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 ORF77556 - 0.07 13.5 0.1 0.22 11.9 0.1 1.9 1 0 0 1 1 1 0 RNA helicase TrwB_AAD_bind PF10412.9 ORF77556 - 0.073 12.0 0.0 0.13 11.2 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain EnY2 PF10163.9 ORF77556 - 0.082 13.3 0.3 3.4 8.1 0.1 2.4 2 0 0 2 2 2 0 Transcription factor e(y)2 PIF1 PF05970.14 ORF77556 - 0.16 11.1 0.2 0.44 9.6 0.1 1.7 2 0 0 2 2 2 0 PIF1-like helicase AAA_19 PF13245.6 ORF77556 - 0.25 11.7 0.8 7.5 6.9 0.8 2.5 1 1 0 1 1 1 0 AAA domain EF-hand_4 PF12763.7 ORF77556 - 1.3 9.0 3.2 11 6.0 0.2 3.0 2 1 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand Hydrolase PF00702.26 ORF51478 - 2.1e-11 44.5 0.7 4.8e-11 43.3 0.6 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF51478 - 0.00013 21.8 0.3 0.00013 21.8 0.3 2.4 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase Rubredoxin_2 PF18073.1 ORF51478 - 0.18 11.6 0.4 0.34 10.7 0.4 1.4 1 0 0 1 1 1 0 Rubredoxin metal binding domain Arteri_Gl PF00951.18 ORF51478 - 0.56 10.0 3.5 1.5 8.6 2.4 2.3 3 0 0 3 3 3 0 Arterivirus GL envelope glycoprotein Ntox34 PF15606.6 ORF44342 - 1.1e-42 144.0 0.6 1.9e-42 143.3 0.6 1.4 1 0 0 1 1 1 1 Bacterial toxin 34 RHS PF03527.14 ORF44342 - 1.9e-14 53.1 0.4 5.8e-14 51.6 0.4 1.9 1 0 0 1 1 1 1 RHS protein RHS_repeat PF05593.14 ORF44342 - 2.8e-11 43.7 34.6 9.5e-08 32.4 5.5 7.7 8 2 1 9 9 9 2 RHS Repeat OCRE PF17780.1 ORF44342 - 2.4 8.2 12.0 0.12 12.4 2.7 3.2 2 1 0 2 2 2 0 OCRE domain KH_1 PF00013.29 ORF38693 - 1e-12 47.7 0.0 3.2e-09 36.5 0.2 2.4 2 0 0 2 2 2 2 KH domain zf-CCHC PF00098.23 ORF38693 - 1.4e-06 28.1 8.0 0.0016 18.4 1.0 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 ORF38693 - 0.0016 18.4 4.4 0.49 10.4 0.1 2.4 1 1 1 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF38693 - 0.84 9.4 12.0 1.3 8.9 0.4 3.4 3 0 0 3 3 3 0 Zinc knuckle zf-CCHC_6 PF15288.6 ORF38693 - 1.2 9.0 9.5 1.5 8.7 1.4 2.9 2 0 0 2 2 2 0 Zinc knuckle DUF5522 PF17653.1 ORF2019 - 1.2 9.1 13.4 0.14 12.1 5.3 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5522) DUF5522 PF17653.1 ORF1674 - 1.2 9.1 13.4 0.14 12.1 5.3 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5522) ABC_tran PF00005.27 ORF142332 - 2.4e-09 37.8 0.0 1.3e-08 35.5 0.0 2.1 1 1 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF142332 - 1.7e-05 24.6 6.1 2.4e-05 24.2 6.1 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF5522 PF17653.1 ORF125865 - 1.2 9.1 13.4 0.14 12.1 5.3 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5522) DUF5522 PF17653.1 ORF118975 - 1.2 9.1 13.4 0.14 12.1 5.3 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5522) Glyco_hydro_125 PF06824.11 ORF112934 - 0.0016 17.4 0.2 0.0026 16.7 0.2 1.3 1 0 0 1 1 1 1 Metal-independent alpha-mannosidase (GH125) Vac14_Fig4_bd PF11916.8 ORF112934 - 0.022 14.4 3.5 0.048 13.3 1.7 2.1 2 0 0 2 2 2 0 Vacuolar protein 14 C-terminal Fig4p binding RNA_binding PF01877.17 ORF112934 - 0.054 13.8 5.5 4.4 7.6 1.1 3.5 2 1 1 3 3 3 0 RNA binding Merozoite_SPAM PF07133.11 ORF112934 - 0.079 12.9 0.5 0.15 12.0 0.5 1.4 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) Pkinase PF00069.25 ORF100559 - 2.6e-67 227.0 0.6 6e-67 225.8 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100559 - 8.3e-49 166.2 0.0 1.4e-48 165.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase NFACT-C PF11923.8 ORF100466 - 7.2e-19 67.7 0.0 7.2e-19 67.7 0.0 5.2 2 1 1 3 3 3 1 NFACT protein C-terminal domain NFACT-R_1 PF05670.13 ORF100466 - 1.1e-09 39.0 0.0 1.1e-09 39.0 0.0 2.5 2 1 0 2 2 2 1 NFACT protein RNA binding domain Ank_2 PF12796.7 ORF89353 - 1.3e-32 112.2 3.3 1.7e-09 38.1 0.2 5.1 2 1 4 6 6 6 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF89353 - 4.3e-23 81.4 0.0 2.5e-07 31.1 0.0 4.8 4 0 0 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF89353 - 1.1e-16 60.6 0.0 0.0001 22.5 0.1 6.8 2 1 5 7 7 7 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF89353 - 1.2e-15 56.0 0.2 0.0025 18.2 0.0 8.2 9 0 0 9 9 9 4 Ankyrin repeat Ank PF00023.30 ORF89353 - 1.3e-07 31.7 0.2 0.03 14.8 0.0 6.0 6 1 0 6 6 6 1 Ankyrin repeat BSP_II PF05432.11 ORF89353 - 0.0013 18.5 19.4 0.002 17.9 19.4 1.3 1 0 0 1 1 1 1 Bone sialoprotein II (BSP-II) DUF3337 PF11816.8 ORF89353 - 8.7 6.2 11.0 0.63 9.9 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF3337) DHQ_synthase PF01761.20 ORF87366 - 0.059 12.5 0.0 0.12 11.5 0.0 1.5 1 0 0 1 1 1 0 3-dehydroquinate synthase zf-rbx1 PF12678.7 ORF61791 - 3.7e-05 23.9 1.7 3.7e-05 23.9 1.7 2.0 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF61791 - 0.00035 20.4 2.3 0.00035 20.4 2.3 2.7 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF61791 - 0.00079 19.7 6.4 0.00079 19.7 6.4 3.2 3 1 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF61791 - 0.001 18.8 2.6 0.053 13.3 0.3 2.9 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF61791 - 0.0015 18.5 0.3 0.0051 16.8 0.3 2.0 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF61791 - 0.0029 17.4 5.9 0.0035 17.2 1.7 2.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF61791 - 0.011 15.7 5.0 0.011 15.7 5.0 2.7 2 1 0 2 2 2 0 zinc-RING finger domain GBP PF02263.19 ORF36805 - 1.6e-34 119.3 0.0 3.2e-34 118.4 0.0 1.5 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain SgrR_N PF12793.7 ORF29623 - 5.9e-38 129.6 2.0 1e-37 128.9 2.0 1.4 1 0 0 1 1 1 1 Sugar transport-related sRNA regulator N-term SBP_bac_5 PF00496.22 ORF29623 - 8.6e-16 57.9 0.0 1.5e-15 57.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle HTH_28 PF13518.6 ORF29623 - 0.018 15.2 0.4 0.039 14.1 0.4 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 ORF29623 - 0.075 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.20 ORF29623 - 0.1 13.0 0.0 0.27 11.6 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator Peptidase_C14 PF00656.22 ORF15973 - 1.5e-10 41.4 0.1 6e-10 39.5 0.0 1.9 2 0 0 2 2 2 1 Caspase domain Ion_trans PF00520.31 ORF130686 - 4.5e-20 71.9 7.7 6.3e-20 71.4 7.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF130686 - 7.5e-09 34.8 0.5 0.006 16.4 0.4 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF130686 - 7.9e-09 34.5 3.1 0.0026 17.2 0.1 3.2 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF130686 - 2.5e-08 34.2 9.9 2.9e-07 30.8 2.8 2.7 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF130686 - 1e-07 31.1 3.3 0.0048 16.3 0.0 3.1 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF130686 - 3.6e-05 23.5 3.4 0.023 14.6 0.2 3.3 3 0 0 3 3 3 2 EF-hand domain pair RFamide_26RFa PF11109.8 ORF130686 - 0.051 14.1 0.5 0.1 13.1 0.5 1.5 1 0 0 1 1 1 0 Orexigenic neuropeptide Qrfp/P518 Saccharop_dh_N PF04455.12 ORF130686 - 0.074 13.5 0.1 0.19 12.2 0.1 1.6 1 0 0 1 1 1 0 LOR/SDH bifunctional enzyme conserved region EF-hand_9 PF14658.6 ORF130686 - 0.14 12.5 0.4 1 9.7 0.0 2.6 2 1 0 2 2 2 0 EF-hand domain Rogdi_lz PF10259.9 ORF130686 - 0.28 10.6 0.0 0.28 10.6 0.0 2.1 3 0 0 3 3 3 0 Rogdi leucine zipper containing protein EF-hand_4 PF12763.7 ORF130686 - 0.31 11.0 3.4 6.1 6.9 0.2 2.6 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Glyco_hydro_20 PF00728.22 ORF13065 - 2.4e-77 260.7 0.2 3.1e-77 260.3 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain Glycohydro_20b2 PF14845.6 ORF13065 - 6.2e-06 26.9 0.0 6.1e-05 23.7 0.0 2.4 1 1 0 1 1 1 1 beta-acetyl hexosaminidase like Glyco_hydro_20b PF02838.15 ORF13065 - 8.3e-05 23.4 0.0 0.00015 22.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, domain 2 RCC1 PF00415.18 ORF104331 - 2.1e-55 185.1 24.7 2.9e-15 56.6 0.6 6.5 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF104331 - 6.2e-20 70.5 37.5 1.5e-05 24.6 3.0 6.4 6 0 0 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat zf-C4H2 PF10146.9 ORF104331 - 0.00041 20.7 0.0 0.00058 20.2 0.0 1.2 1 0 0 1 1 1 1 Zinc finger-containing protein DUF745 PF05335.13 ORF104331 - 0.038 13.7 1.9 0.073 12.8 1.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF745) TACC_C PF05010.14 ORF104331 - 0.052 13.3 4.0 0.077 12.8 4.0 1.1 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal UPF0242 PF06785.11 ORF104331 - 0.14 12.2 4.1 0.21 11.7 4.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 ORF104331 - 0.49 9.0 1.1 0.7 8.4 1.1 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Nup88 PF10168.9 ORF104331 - 0.81 7.4 3.9 1.2 6.9 3.9 1.1 1 0 0 1 1 1 0 Nuclear pore component Hrs_helical PF12210.8 ORF104331 - 1.9 9.1 6.7 4.8 7.8 6.7 1.7 1 1 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate DUF883 PF05957.13 ORF104331 - 2.4 8.8 6.2 0.23 12.1 1.1 2.0 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF883) N_BRCA1_IG PF16158.5 ORF85961 - 9.2e-10 39.2 0.0 2.3e-09 37.9 0.0 1.7 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene PB1 PF00564.24 ORF85961 - 0.00074 19.4 0.2 0.003 17.4 0.1 2.2 2 0 0 2 2 2 1 PB1 domain TMEM151 PF14857.6 ORF71332 - 0.018 14.0 0.4 1 8.2 0.2 2.5 2 0 0 2 2 2 0 TMEM151 family DUF2921 PF11145.8 ORF71332 - 0.21 9.4 4.7 1.1 7.0 2.1 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2921) SF3A3 PF16837.5 ORF97694 - 0.17 12.4 5.3 0.12 12.9 0.9 2.9 2 0 0 2 2 2 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 DUF21 PF01595.20 ORF97033 - 4.5e-26 91.6 0.7 7.7e-26 90.9 0.7 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain YrhC PF14143.6 ORF97033 - 0.026 14.6 2.5 0.056 13.6 2.5 1.5 1 0 0 1 1 1 0 YrhC-like protein CBS PF00571.28 ORF97033 - 0.16 12.4 0.4 26 5.4 0.1 3.0 2 1 0 2 2 2 0 CBS domain DUF3242 PF11586.8 ORF88213 - 0.076 12.7 0.0 0.19 11.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3242) Pox_A32 PF04665.12 ORF67048 - 3.5e-05 23.4 0.0 0.00019 21.0 0.0 1.8 2 0 0 2 2 2 1 Poxvirus A32 protein Dynein_C PF18199.1 ORF60427 - 7.7e-111 370.2 0.0 9.8e-111 369.8 0.0 1.1 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF60427 - 4.2e-56 189.3 0.0 7.9e-56 188.4 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF60427 - 8.8e-35 119.4 0.0 1.7e-34 118.4 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain Aconitase PF00330.20 ORF27550 - 5.4e-71 240.0 0.0 7e-71 239.6 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 ORF27550 - 9.9e-42 142.4 0.0 1.6e-41 141.7 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Pkinase PF00069.25 ORF27455 - 1.4e-63 214.8 0.0 1.8e-63 214.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF27455 - 3.5e-26 92.0 0.1 3.6e-25 88.7 0.1 2.0 1 1 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF27455 - 0.0014 18.3 0.0 0.0028 17.3 0.0 1.5 1 0 0 1 1 1 1 RIO1 family FTA2 PF13095.6 ORF27455 - 0.093 12.3 0.1 0.17 11.5 0.1 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF27455 - 0.22 11.4 0.0 0.37 10.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Metallophos PF00149.28 ORF20665 - 0.002 18.6 0.1 0.0032 18.0 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PCSK9_C1 PF18459.1 ORF20665 - 0.0085 16.2 0.0 0.022 14.9 0.0 1.7 1 0 0 1 1 1 1 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Glyco_hydro_43 PF04616.14 ORF15205 - 6.9e-78 261.9 0.0 9.2e-78 261.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 GH43_C2 PF17851.1 ORF15205 - 9.2e-22 77.8 0.0 1.5e-21 77.1 0.0 1.3 1 0 0 1 1 1 1 Beta xylosidase C-terminal Concanavalin A-like domain SF3A3 PF16837.5 ORF142360 - 0.43 11.1 6.9 0.11 13.0 0.8 3.0 2 0 0 2 2 2 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 DUF4064 PF13273.6 ORF140777 - 0.43 10.9 3.3 0.83 10.0 0.3 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) MFS_1 PF07690.16 ORF91647 - 4.2e-08 32.5 48.5 0.00079 18.4 51.1 3.7 2 1 0 2 2 2 2 Major Facilitator Superfamily Lipase_3 PF01764.25 ORF42043 - 1.1e-09 38.3 0.0 1.9e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 Lipase (class 3) PH PF00169.29 ORF42043 - 0.017 15.6 0.1 4.6 7.8 0.0 2.3 2 0 0 2 2 2 0 PH domain Glyco_hydro_15 PF00723.21 ORF40715 - 1.4e-31 109.7 0.1 3.8e-31 108.3 0.1 1.7 1 1 0 1 1 1 1 Glycosyl hydrolases family 15 Trefoil PF00088.18 ORF40715 - 2.8e-09 36.7 8.3 2.8e-09 36.7 8.3 2.3 2 1 0 2 2 2 1 Trefoil (P-type) domain PH_14 PF17787.1 ORF40715 - 0.13 12.2 0.0 0.39 10.6 0.0 1.8 2 0 0 2 2 2 0 PH domain DUF4456 PF14644.6 ORF3247 - 7.6e-20 71.5 2.5 7.6e-20 71.5 2.5 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4456) Cor1 PF04803.12 ORF3247 - 0.67 10.2 6.8 1.4 9.2 0.3 3.4 3 1 0 3 3 3 0 Cor1/Xlr/Xmr conserved region FTZ PF03867.14 ORF3247 - 9.1 5.7 7.1 2.5 7.6 4.0 1.5 2 0 0 2 2 2 0 Fushi tarazu (FTZ), N-terminal region Glyco_hydro_20 PF00728.22 ORF30060 - 7.8e-74 249.2 2.3 1e-73 248.8 2.3 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain Glycohydro_20b2 PF14845.6 ORF30060 - 5.8e-07 30.2 0.1 1.3e-05 25.9 0.0 2.6 3 0 0 3 3 3 1 beta-acetyl hexosaminidase like Glyco_hydro_20b PF02838.15 ORF30060 - 1.9e-05 25.4 0.0 4.1e-05 24.3 0.0 1.6 1 1 0 1 1 1 1 Glycosyl hydrolase family 20, domain 2 BCS1_N PF08740.11 ORF2878 - 0.0051 16.8 0.0 0.0089 16.0 0.0 1.3 1 0 0 1 1 1 1 BCS1 N terminal FtsX PF02687.21 ORF87487 - 3.1e-11 43.6 11.7 3.1e-11 43.6 11.7 4.3 3 1 0 3 3 3 2 FtsX-like permease family VRR_NUC PF08774.11 ORF78471 - 6.1e-14 52.0 0.0 1.9e-13 50.4 0.0 1.9 1 0 0 1 1 1 1 VRR-NUC domain FtsX PF02687.21 ORF67148 - 3.1e-11 43.6 11.7 3.1e-11 43.6 11.7 4.3 3 1 0 3 3 3 2 FtsX-like permease family YebG PF07130.12 ORF58019 - 0.43 10.5 3.3 0.53 10.2 0.2 2.7 3 0 0 3 3 3 0 YebG protein PP2C PF00481.21 ORF54320 - 1.1e-27 97.4 0.0 3.1e-27 95.9 0.0 1.7 1 1 1 2 2 2 1 Protein phosphatase 2C Pkinase PF00069.25 ORF54320 - 2.5e-19 69.7 0.0 3.8e-19 69.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF54320 - 3.1e-12 46.3 0.0 5.3e-12 45.6 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PP2C_2 PF13672.6 ORF54320 - 7.1e-05 22.5 0.1 0.00013 21.7 0.1 1.5 1 1 0 1 1 1 1 Protein phosphatase 2C Pkinase_fungal PF17667.1 ORF54320 - 0.00037 19.4 0.0 0.00057 18.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF54320 - 0.0034 16.8 0.1 0.0058 16.0 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF54320 - 0.0086 16.0 0.1 0.023 14.6 0.1 1.7 1 0 0 1 1 1 1 Phosphotransferase enzyme family Thioredoxin PF00085.20 ORF49110 - 3.4e-07 30.2 1.8 0.0004 20.3 0.2 2.5 2 0 0 2 2 2 2 Thioredoxin OST3_OST6 PF04756.13 ORF49110 - 0.00016 21.1 2.9 0.0071 15.7 0.1 2.3 2 0 0 2 2 2 2 OST3 / OST6 family, transporter family DUF772 PF05598.11 ORF49110 - 0.021 14.8 0.0 0.062 13.3 0.0 1.9 1 0 0 1 1 1 0 Transposase domain (DUF772) Thioredoxin_7 PF13899.6 ORF49110 - 0.041 14.1 0.1 0.86 9.8 0.0 2.6 2 0 0 2 2 2 0 Thioredoxin-like Toxin-deaminase PF14424.6 ORF49110 - 0.062 13.4 1.0 2.2 8.4 0.0 2.7 2 0 0 2 2 2 0 The BURPS668_1122 family of deaminases DUF1722 PF08349.11 ORF49110 - 0.1 12.9 1.7 11 6.4 0.0 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF1722) Thioredoxin_2 PF13098.6 ORF49110 - 0.11 13.0 1.2 2 8.9 0.1 2.8 2 1 0 2 2 2 0 Thioredoxin-like domain DUF836 PF05768.14 ORF49110 - 0.93 9.9 3.9 14 6.1 0.2 3.1 3 0 0 3 3 3 0 Glutaredoxin-like domain (DUF836) DUF3921 PF13060.6 ORF29326 - 0.021 14.8 0.1 0.061 13.4 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3921) Asp PF00026.23 ORF17980 - 9.2e-50 169.8 0.0 2.4e-49 168.5 0.0 1.7 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF17980 - 2.7e-12 47.3 1.0 1.2e-11 45.2 0.4 2.1 2 0 0 2 2 2 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF17980 - 0.0087 15.9 0.0 0.088 12.6 0.0 2.3 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF17980 - 0.012 16.3 0.0 5.4 7.7 0.0 3.0 3 0 0 3 3 3 0 Aspartyl protease IL17 PF06083.11 ORF17980 - 0.17 12.4 0.1 0.57 10.7 0.0 1.8 2 0 0 2 2 2 0 Interleukin-17 Asp PF00026.23 ORF147863 - 9.2e-50 169.8 0.0 2.4e-49 168.5 0.0 1.7 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF147863 - 2.7e-12 47.3 1.0 1.2e-11 45.2 0.4 2.1 2 0 0 2 2 2 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF147863 - 0.0087 15.9 0.0 0.088 12.6 0.0 2.3 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF147863 - 0.012 16.3 0.0 5.4 7.7 0.0 3.0 3 0 0 3 3 3 0 Aspartyl protease IL17 PF06083.11 ORF147863 - 0.17 12.4 0.1 0.57 10.7 0.0 1.8 2 0 0 2 2 2 0 Interleukin-17 YebG PF07130.12 ORF140994 - 0.42 10.5 3.3 0.53 10.2 0.2 2.7 3 0 0 3 3 3 0 YebG protein FtsX PF02687.21 ORF123709 - 3.1e-11 43.6 11.7 3.1e-11 43.6 11.7 4.3 3 1 0 3 3 3 2 FtsX-like permease family N_BRCA1_IG PF16158.5 ORF121162 - 1.1e-08 35.7 0.0 5e-08 33.6 0.0 2.1 2 0 0 2 2 2 1 Ig-like domain from next to BRCA1 gene PB1 PF00564.24 ORF121162 - 0.00044 20.1 0.2 0.0012 18.8 0.2 1.8 1 0 0 1 1 1 1 PB1 domain CoA_transf_3 PF02515.17 ORF105844 - 9.1e-129 429.8 0.0 1.1e-128 429.5 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III DUF4064 PF13273.6 ORF9053 - 0.0029 17.8 10.9 0.82 10.0 2.5 3.4 3 0 0 3 3 3 2 Protein of unknown function (DUF4064) DUF2207 PF09972.9 ORF9053 - 0.0085 14.9 4.9 0.33 9.6 2.2 2.6 2 1 0 2 2 2 2 Predicted membrane protein (DUF2207) SUR7 PF06687.12 ORF9053 - 1.6 8.3 0.0 1.6 8.3 0.0 3.2 2 1 0 2 2 2 0 SUR7/PalI family DUF1218 PF06749.12 ORF9053 - 5.6 7.6 6.6 15 6.2 0.2 3.0 4 0 0 4 4 4 0 Protein of unknown function (DUF1218) 5_nucleotid_C PF02872.18 ORF80752 - 2.3e-14 53.9 0.0 5.2e-14 52.8 0.0 1.5 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain EF-hand_1 PF00036.32 ORF80752 - 3.3e-13 48.2 6.5 1.5e-06 27.3 2.6 3.6 2 1 1 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF80752 - 6.1e-12 44.5 4.8 0.00085 18.7 0.0 3.8 2 1 1 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF80752 - 1.1e-10 40.5 3.9 6.3e-05 22.6 0.8 3.6 2 1 1 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF80752 - 1.1e-08 35.3 0.7 2.2e-06 28.0 1.3 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF80752 - 1e-05 25.3 2.9 0.00037 20.3 1.5 2.6 2 0 0 2 2 2 1 EF-hand domain pair Metallophos PF00149.28 ORF80752 - 0.00015 22.3 0.0 0.00029 21.4 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase EF-hand_4 PF12763.7 ORF80752 - 0.14 12.1 1.0 0.55 10.2 0.6 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF80752 - 0.18 11.7 0.4 2.9 7.8 0.1 2.3 2 0 0 2 2 2 0 EF hand Ank PF00023.30 ORF32793 - 2.4e-10 40.4 2.2 0.022 15.2 0.1 5.2 5 0 0 5 5 5 3 Ankyrin repeat Ank_2 PF12796.7 ORF32793 - 3.8e-10 40.2 0.0 0.01 16.4 0.0 3.9 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF32793 - 4.1e-10 40.0 0.0 0.0014 19.2 0.0 4.9 4 1 2 6 6 6 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF32793 - 8.4e-10 38.1 0.1 0.17 12.5 0.0 5.0 5 0 0 5 5 5 3 Ankyrin repeat TPR_MalT PF17874.1 ORF14701 - 8.7e-05 22.0 9.5 0.0017 17.8 1.5 2.4 1 1 1 2 2 2 2 MalT-like TPR region TPR_1 PF00515.28 ORF14701 - 0.00052 19.7 3.4 0.52 10.2 0.1 4.1 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF14701 - 0.0012 19.1 10.5 0.13 12.6 1.5 3.8 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF14701 - 0.0027 17.7 6.0 1.3 9.3 0.3 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat NARP1 PF12569.8 ORF14701 - 0.035 13.0 0.1 0.38 9.6 0.0 2.0 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 TPR_8 PF13181.6 ORF14701 - 0.087 13.1 3.0 0.12 12.6 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF14701 - 0.24 11.3 4.6 1.3 9.0 0.4 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat PGI PF00342.19 ORF139690 - 4.3e-183 609.4 0.0 4.9e-183 609.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase DUF4938 PF16292.5 ORF139690 - 0.0088 15.4 0.0 0.017 14.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4938) DUF2666 PF10869.8 ORF139690 - 0.2 11.9 3.7 0.17 12.1 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2666) Ank PF00023.30 ORF125986 - 4.2e-11 42.8 2.7 0.022 15.2 0.1 5.5 6 0 0 6 6 6 3 Ankyrin repeat Ank_2 PF12796.7 ORF125986 - 1.4e-10 41.6 0.0 0.0052 17.3 0.0 3.9 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF125986 - 4.5e-09 36.7 0.0 0.0014 19.2 0.0 4.8 5 2 0 5 5 5 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF125986 - 1.6e-08 34.2 0.0 0.8 10.5 0.0 5.6 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF123992 - 2.4e-10 40.4 2.2 0.022 15.2 0.1 5.2 5 0 0 5 5 5 3 Ankyrin repeat Ank_2 PF12796.7 ORF123992 - 3.8e-10 40.2 0.0 0.01 16.4 0.0 3.9 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF123992 - 4.1e-10 40.0 0.0 0.0014 19.2 0.0 4.9 4 1 2 6 6 6 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF123992 - 8.4e-10 38.1 0.1 0.17 12.5 0.0 5.0 5 0 0 5 5 5 3 Ankyrin repeat Choline_transpo PF04515.12 ORF121041 - 5.8e-52 176.9 29.9 5.8e-52 176.9 29.9 2.0 2 0 0 2 2 2 1 Plasma-membrane choline transporter PIG-P PF08510.12 ORF121041 - 0.64 9.9 0.0 0.64 9.9 0.0 3.1 3 1 1 4 4 4 0 PIG-P VSP PF03302.13 ORF116162 - 0.0082 15.0 3.2 0.014 14.3 3.2 1.2 1 0 0 1 1 1 1 Giardia variant-specific surface protein Sec1 PF00995.23 ORF85357 - 6.2e-114 382.3 17.0 7.3e-114 382.1 17.0 1.0 1 0 0 1 1 1 1 Sec1 family V-ATPase_H_C PF11698.8 ORF85357 - 0.019 15.1 1.2 0.019 15.1 1.2 2.5 2 1 0 2 2 2 0 V-ATPase subunit H Glyco_tran_WecB PF03808.13 ORF85357 - 0.082 12.9 0.0 2.7 7.9 0.0 2.9 3 1 0 3 3 3 0 Glycosyl transferase WecB/TagA/CpsF family CdiI_2 PF18593.1 ORF85357 - 0.15 12.7 2.6 3.7 8.3 0.2 3.2 3 1 0 3 3 3 0 CdiI immunity protein CoA_transf_3 PF02515.17 ORF82364 - 8.9e-129 429.8 0.0 1.1e-128 429.5 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III CoA_transf_3 PF02515.17 ORF73642 - 8.9e-129 429.8 0.0 1.1e-128 429.5 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III ABC_tran PF00005.27 ORF70612 - 1.1e-08 35.7 0.0 4.8e-08 33.6 0.0 2.1 1 1 0 1 1 1 1 ABC transporter AAA_25 PF13481.6 ORF70612 - 0.023 14.3 0.9 0.084 12.4 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF70612 - 0.036 14.4 0.3 0.18 12.2 0.0 2.4 2 1 0 2 2 2 0 AAA ATPase domain SMC_N PF02463.19 ORF70612 - 0.047 13.1 0.0 2.4 7.6 0.0 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Iso_dh PF00180.20 ORF70612 - 0.065 12.4 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Isocitrate/isopropylmalate dehydrogenase AAA_29 PF13555.6 ORF70612 - 0.086 12.6 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF70612 - 0.1 12.9 0.0 1.3 9.3 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 ORF70612 - 0.37 11.0 2.5 0.54 10.5 0.1 2.4 3 0 0 3 3 3 0 AAA domain MORN PF02493.20 ORF49753 - 4.4e-05 23.1 37.5 0.0014 18.4 1.6 7.1 7 0 0 7 7 7 4 MORN repeat CDC45 PF02724.14 ORF49753 - 0.25 9.6 12.6 0.34 9.1 12.6 1.2 1 0 0 1 1 1 0 CDC45-like protein CoA_transf_3 PF02515.17 ORF38834 - 8.9e-129 429.8 0.0 1.1e-128 429.5 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III Collagen PF01391.18 ORF35852 - 0.0056 16.4 15.2 0.0056 16.4 15.2 1.8 2 0 0 2 2 2 1 Collagen triple helix repeat (20 copies) TFIIA PF03153.13 ORF35852 - 0.033 14.2 18.5 0.053 13.5 18.5 1.4 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Cupin_2 PF07883.11 ORF35852 - 0.044 13.5 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 Cupin domain Spt20 PF12090.8 ORF35852 - 3.3 7.3 25.6 5.4 6.6 25.6 1.3 1 0 0 1 1 1 0 Spt20 family Suf PF05843.14 ORF35852 - 4 7.3 15.0 8 6.3 15.0 1.4 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) PAT1 PF09770.9 ORF35852 - 6.8 4.8 14.3 8.9 4.4 14.3 1.1 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Staphostatin_B PF09023.10 ORF30131 - 0.12 12.5 2.8 0.15 12.2 0.4 2.3 2 0 0 2 2 2 0 Staphostatin B TauE PF01925.19 ORF141409 - 6.4e-12 45.6 17.1 2.6e-09 37.1 9.7 2.4 2 1 0 2 2 2 2 Sulfite exporter TauE/SafE GWT1 PF06423.12 ORF141409 - 0.0048 17.0 4.7 0.31 11.1 0.5 3.0 2 2 0 2 2 2 2 GWT1 Macoilin PF09726.9 ORF141409 - 0.18 10.3 17.8 0.24 9.9 17.8 1.1 1 0 0 1 1 1 0 Macoilin family LAP1C PF05609.12 ORF141409 - 0.67 9.0 23.7 1 8.4 23.7 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) LMBR1 PF04791.16 ORF141409 - 5.4 5.8 14.3 4.2 6.2 2.3 2.4 2 0 0 2 2 2 0 LMBR1-like membrane protein PARP PF00644.20 ORF113880 - 0.00089 18.9 0.0 0.0016 18.1 0.0 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Cpn60_TCP1 PF00118.24 ORF103012 - 1.1e-157 525.7 7.9 1.2e-157 525.5 7.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF3226 PF11536.8 ORF103012 - 0.032 13.9 2.6 0.065 12.9 2.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3226) DUF1894 PF08979.11 ORF103012 - 0.056 13.8 3.3 0.3 11.5 0.3 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1894) TPR_1 PF00515.28 ORF99937 - 1.8e-56 185.8 33.9 4e-09 35.9 0.0 9.8 9 1 1 10 10 10 9 Tetratricopeptide repeat TPR_2 PF07719.17 ORF99937 - 3.6e-48 157.8 30.3 1e-06 28.4 0.0 10.3 10 0 0 10 10 10 9 Tetratricopeptide repeat TPR_11 PF13414.6 ORF99937 - 3.4e-32 109.8 22.8 3.1e-08 33.2 0.1 7.9 6 3 3 9 9 9 6 TPR repeat TPR_8 PF13181.6 ORF99937 - 1.2e-29 100.0 35.2 3.1e-05 23.8 0.5 10.2 10 0 0 10 10 10 7 Tetratricopeptide repeat STI1 PF17830.1 ORF99937 - 2.2e-26 91.5 18.8 2e-16 59.7 5.0 3.2 3 0 0 3 3 2 2 STI1 domain TPR_14 PF13428.6 ORF99937 - 1.1e-22 78.8 2.7 0.21 12.5 0.2 8.8 5 3 4 9 9 9 6 Tetratricopeptide repeat TPR_19 PF14559.6 ORF99937 - 8.9e-21 74.2 8.9 0.0023 18.4 0.2 6.6 3 3 3 6 6 6 6 Tetratricopeptide repeat TPR_16 PF13432.6 ORF99937 - 2.8e-19 69.5 0.1 0.0035 18.0 0.0 6.7 6 1 0 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF99937 - 4.3e-19 68.6 13.7 4.6e-08 33.2 0.7 7.1 4 2 2 6 6 6 4 Tetratricopeptide repeat TPR_17 PF13431.6 ORF99937 - 3e-18 64.8 11.4 0.00068 19.8 0.0 9.4 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF99937 - 2.6e-12 45.8 7.6 0.0056 16.6 0.2 8.2 8 0 0 8 8 8 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF99937 - 2.9e-12 46.6 0.0 0.2 11.8 0.0 6.3 4 1 2 7 7 7 4 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF99937 - 7.2e-09 35.6 14.1 0.087 12.9 0.0 7.4 7 1 0 7 7 6 3 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.6 ORF99937 - 2e-07 31.2 12.5 9.9 7.1 0.3 7.9 8 0 0 8 8 8 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF99937 - 2.8e-07 30.2 10.2 0.98 9.4 0.0 7.1 8 0 0 8 8 7 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF99937 - 6e-05 23.2 19.1 0.037 14.3 2.2 5.5 5 1 1 6 6 5 3 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 ORF99937 - 0.0043 16.0 45.6 0.26 10.2 0.1 5.4 2 2 3 5 5 5 3 NMDA receptor-regulated protein 1 TPR_3 PF07720.12 ORF99937 - 0.12 12.4 10.2 8.2 6.5 0.1 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat CLN3 PF02487.17 ORF99937 - 2.6 7.0 4.6 4.6 6.2 4.6 1.3 1 0 0 1 1 1 0 CLN3 protein Cytomega_UL84 PF06284.11 ORF99937 - 5.1 5.4 6.7 7.4 4.9 6.7 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein ANAPC4_WD40 PF12894.7 ORF96793 - 1.6e-13 50.8 1.8 4e-05 23.8 0.0 5.4 3 2 2 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF96793 - 5.4e-06 27.0 18.3 0.0025 18.6 0.6 6.7 7 0 0 7 7 7 2 WD domain, G-beta repeat PQQ_2 PF13360.6 ORF96793 - 0.0047 16.5 0.0 1.4 8.5 0.0 2.7 2 1 0 2 2 2 2 PQQ-like domain DUF5046 PF16465.5 ORF96793 - 0.047 13.1 0.0 0.74 9.2 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5046) DUF4407 PF14362.6 ORF40631 - 0.0061 16.0 10.8 0.0061 16.0 10.8 2.4 2 1 1 3 3 3 1 Domain of unknown function (DUF4407) Trimer_CC PF08954.11 ORF40631 - 0.12 11.9 7.1 0.33 10.5 0.1 3.1 3 0 0 3 3 3 0 Trimerisation motif DHR10 PF18595.1 ORF40631 - 0.26 11.4 26.4 0.29 11.2 15.9 3.6 2 1 1 3 3 3 0 Designed helical repeat protein 10 domain GAS PF13851.6 ORF40631 - 0.42 9.9 32.6 0.059 12.7 24.6 3.1 3 1 0 3 3 3 0 Growth-arrest specific micro-tubule binding DUF489 PF04356.12 ORF40631 - 0.57 10.2 6.7 0.5 10.4 4.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF489) ECM11 PF15463.6 ORF40631 - 1.8 9.2 16.7 0.074 13.6 2.8 3.4 2 1 2 4 4 4 0 Extracellular mutant protein 11 PKcGMP_CC PF16808.5 ORF40631 - 2 8.3 16.8 1.2 9.1 0.7 4.4 3 1 1 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF3450 PF11932.8 ORF40631 - 2.1 7.6 14.8 8.8 5.6 14.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 ORF40631 - 2.4 7.7 18.5 6.9 6.1 18.4 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF948 PF06103.11 ORF40631 - 2.9 8.2 7.5 3.1 8.1 2.4 3.6 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Golgin_A5 PF09787.9 ORF40631 - 3.9 6.8 26.4 0.86 9.0 20.5 2.6 2 1 1 3 3 3 0 Golgin subfamily A member 5 Med21 PF11221.8 ORF40631 - 3.9 7.7 15.9 0.43 10.8 1.3 3.4 2 1 2 4 4 4 0 Subunit 21 of Mediator complex TPR_MLP1_2 PF07926.12 ORF40631 - 4.1 7.5 25.7 0.086 12.9 7.0 3.3 2 1 0 3 3 3 0 TPR/MLP1/MLP2-like protein Jnk-SapK_ap_N PF09744.9 ORF40631 - 4.8 7.4 33.6 2.8 8.2 10.2 4.0 2 2 1 3 3 3 0 JNK_SAPK-associated protein-1 Med4 PF10018.9 ORF40631 - 6.2 6.4 17.6 9 5.9 9.0 2.9 1 1 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 TMPIT PF07851.13 ORF40631 - 8.5 5.5 14.7 9.9 5.3 12.7 2.2 1 1 1 2 2 2 0 TMPIT-like protein Amidohydro_1 PF01979.20 ORF31721 - 9.3e-28 97.5 0.0 1.2e-27 97.1 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF31721 - 0.0016 18.0 0.0 0.015 14.8 0.0 2.1 2 0 0 2 2 2 1 Amidohydrolase family Kinesin PF00225.23 ORF30278 - 8.5e-100 333.9 0.1 1.2e-99 333.4 0.1 1.2 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF30278 - 1.9e-23 83.1 0.0 5.9e-23 81.5 0.0 1.9 1 0 0 1 1 1 1 Microtubule binding AAA_30 PF13604.6 ORF30278 - 0.067 12.9 0.0 0.59 9.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain YabA PF06156.13 ORF30278 - 0.18 12.5 6.7 0.27 11.9 0.6 3.5 4 0 0 4 4 4 0 Initiation control protein YabA DivIC PF04977.15 ORF30278 - 2.5 7.9 5.0 0.49 10.2 0.4 2.1 2 0 0 2 2 2 0 Septum formation initiator TLE_N PF03920.15 ORF30278 - 3 7.9 6.3 1.2 9.2 0.3 2.3 2 0 0 2 2 2 0 Groucho/TLE N-terminal Q-rich domain DUF4476 PF14771.6 ORF2528 - 0.15 12.4 0.2 3.1 8.1 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4476) Occludin_ELL PF07303.13 ORF143019 - 0.0028 18.3 46.4 0.0089 16.7 4.1 6.6 1 1 6 7 7 7 2 Occludin homology domain Baculo_PEP_C PF04513.12 ORF143019 - 0.0031 17.6 25.2 0.034 14.2 5.4 5.4 2 2 1 5 5 5 1 Baculovirus polyhedron envelope protein, PEP, C terminus HALZ PF02183.18 ORF143019 - 0.0071 16.5 1.5 0.0071 16.5 1.5 4.4 4 0 0 4 4 4 1 Homeobox associated leucine zipper DUF5131 PF07505.11 ORF143019 - 0.034 13.6 1.3 0.063 12.7 1.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF5131) Seryl_tRNA_N PF02403.22 ORF143019 - 0.056 13.7 0.5 0.056 13.7 0.5 6.6 2 1 4 7 7 7 0 Seryl-tRNA synthetase N-terminal domain ApoO PF09769.9 ORF143019 - 0.74 9.8 7.6 1.2 9.1 0.4 3.7 3 1 0 3 3 3 0 Apolipoprotein O DUF4407 PF14362.6 ORF143019 - 1.2 8.5 35.8 0.92 8.8 11.0 4.0 1 1 3 4 4 4 0 Domain of unknown function (DUF4407) Cytochrom_C_2 PF01322.20 ORF143019 - 1.3 9.9 5.9 7.9 7.4 0.1 3.6 2 1 0 2 2 2 0 Cytochrome C' KxDL PF10241.9 ORF143019 - 2.5 8.5 33.7 0.032 14.5 4.8 5.5 4 3 2 6 6 6 0 Uncharacterized conserved protein MtrB PF05440.12 ORF143019 - 2.6 8.5 5.5 11 6.5 0.2 3.9 3 1 0 4 4 4 0 Tetrahydromethanopterin S-methyltransferase subunit B Fib_alpha PF08702.10 ORF143019 - 5.7 7.1 57.3 0.37 11.0 9.2 5.9 2 1 5 7 7 7 0 Fibrinogen alpha/beta chain family Fez1 PF06818.15 ORF143019 - 9.2 6.7 53.2 2.4 8.6 10.1 4.1 1 1 3 4 4 4 0 Fez1 SKG6 PF08693.10 ORF128232 - 3.3 7.2 5.4 0.32 10.5 0.4 1.9 2 0 0 2 2 2 0 Transmembrane alpha-helix domain APC_N_CC PF16689.5 ORF116218 - 0.0017 18.4 3.5 0.0017 18.4 3.5 3.7 3 0 0 3 3 3 1 Coiled-coil N-terminus of APC, dimerisation domain DUF1664 PF07889.12 ORF116218 - 0.011 15.7 1.6 0.011 15.7 1.6 5.9 3 3 4 7 7 7 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 ORF116218 - 0.037 14.1 6.4 0.1 12.6 1.3 3.4 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus APG17 PF04108.12 ORF116218 - 1.7 7.7 38.7 0.084 12.0 7.0 4.2 2 1 0 3 3 3 0 Autophagy protein Apg17 PI_PP_I PF18363.1 ORF116218 - 5.8 7.2 9.6 0.86 9.8 0.7 3.7 2 1 1 3 3 3 0 Phosphoinositide phosphatase insertion domain DUF5340 PF17275.2 ORF116218 - 7.2 6.8 7.3 1.3 9.2 1.5 2.8 2 1 1 3 3 3 0 Family of unknown function (DUF5340) GTP_EFTU PF00009.27 ORF100475 - 4.4e-40 137.3 0.0 7.8e-40 136.5 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 ORF100475 - 2e-22 79.0 0.0 4.4e-22 77.9 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF100475 - 4.7e-10 39.7 4.3 8.2e-10 38.9 3.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF100475 - 4.3e-05 23.5 0.3 0.00012 22.1 0.1 1.8 2 0 0 2 2 2 1 Elongation Factor G, domain II MMR_HSR1 PF01926.23 ORF100475 - 0.00013 22.0 0.1 0.0011 19.0 0.0 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF100475 - 0.014 15.0 0.0 0.21 11.1 0.0 2.6 2 1 0 2 2 2 0 Ferrous iron transport protein B DUF4190 PF13828.6 ORF100475 - 0.33 10.7 2.6 0.26 11.1 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4190) Dzip-like_N PF13815.6 ORF91284 - 1e-21 77.1 7.2 1e-21 77.1 7.2 6.7 4 2 1 5 5 5 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal zf-C2H2_jaz PF12171.8 ORF91284 - 5e-05 23.5 0.3 5e-05 23.5 0.3 2.2 3 0 0 3 3 3 1 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 ORF91284 - 0.00019 21.7 0.1 0.00044 20.5 0.1 1.7 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-met PF12874.7 ORF91284 - 0.00064 20.0 0.4 0.0017 18.7 0.1 2.0 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 ORF91284 - 0.0068 17.2 0.0 0.017 15.9 0.0 1.8 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF91284 - 0.017 15.8 0.7 0.017 15.8 0.7 4.4 2 2 1 5 5 5 0 Zinc finger C2H2-type, 3 repeats zf-Di19 PF05605.12 ORF91284 - 0.054 13.8 0.7 0.22 11.9 0.1 2.3 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_9 PF16293.5 ORF91284 - 0.19 11.6 0.1 0.19 11.6 0.1 3.4 3 0 0 3 3 3 0 C2H2 type zinc-finger (1 copy) Nup96 PF12110.8 ORF65579 - 1.3e-29 103.2 1.9 1.8e-23 83.1 0.7 3.3 1 1 1 2 2 2 2 Nuclear protein 96 PEPCK_ATP PF01293.20 ORF62542 - 2.9e-201 669.2 0.0 3.3e-201 668.9 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase Kei1 PF08552.11 ORF59435 - 4.2 7.2 9.6 0.51 10.2 2.2 2.7 3 0 0 3 3 3 0 Inositolphosphorylceramide synthase subunit Kei1 GP17 PF17420.2 ORF48781 - 0.038 14.1 1.1 0.11 12.6 1.1 1.8 1 0 0 1 1 1 0 Superinfection exclusion gene product 17 R3H-assoc PF13902.6 ORF35276 - 0.43 11.0 3.1 14 6.0 1.0 3.1 2 1 0 2 2 2 0 R3H-associated N-terminal domain Pyridoxal_deC PF00282.19 ORF144732 - 4.9e-18 65.0 0.0 9.7e-18 64.0 0.0 1.4 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 ORF144732 - 6e-09 35.3 0.0 2.4e-08 33.3 0.0 1.8 1 1 0 1 1 1 1 Aminotransferase class-V HGTP_anticodon PF03129.20 ORF137975 - 3.5e-22 78.4 0.0 8.4e-22 77.1 0.0 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 ORF137975 - 1.1e-09 38.5 0.0 2.9e-09 37.1 0.0 1.8 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) mTERF PF02536.14 ORF11529 - 9.4e-57 192.3 0.0 3.1e-36 124.9 0.1 2.6 1 1 1 2 2 2 2 mTERF Sigma70_r3 PF04539.16 ORF11529 - 0.0015 18.6 0.7 1.2 9.3 0.0 3.9 4 0 0 4 4 4 1 Sigma-70 region 3 SurA_N_3 PF13624.6 ORF11529 - 0.0029 17.4 0.0 0.0077 16.0 0.0 1.7 1 0 0 1 1 1 1 SurA N-terminal domain TetR_C_1 PF02909.17 ORF11529 - 0.012 15.5 0.0 7.9 6.3 0.0 4.0 4 1 0 5 5 5 0 Tetracyclin repressor-like, C-terminal domain OHCU_decarbox PF09349.10 ORF11529 - 0.017 15.6 0.0 16 6.0 0.0 3.3 3 0 0 3 3 3 0 OHCU decarboxylase DUF937 PF06078.11 ORF11529 - 0.095 13.3 0.1 0.68 10.5 0.1 2.3 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF937) TAL_effector PF03377.13 ORF11529 - 0.11 12.8 0.7 17 5.8 0.0 4.3 6 0 0 6 6 6 0 TAL effector repeat C2 PF00168.30 ORF83750 - 3.3e-05 24.1 0.0 0.00083 19.6 0.0 2.3 2 0 0 2 2 2 1 C2 domain Ferlin_C PF16165.5 ORF83750 - 0.001 19.1 0.0 0.002 18.1 0.0 1.4 1 0 0 1 1 1 1 Ferlin C-terminus CCDC92 PF14916.6 ORF53112 - 0.045 13.5 0.1 0.12 12.2 0.1 1.7 1 0 0 1 1 1 0 Coiled-coil domain of unknown function TTL PF03133.15 ORF5240 - 2.6e-42 145.0 5.7 5.7e-42 143.8 5.7 1.5 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF5240 - 0.00043 19.6 0.5 0.0069 15.7 0.1 2.2 2 0 0 2 2 2 1 YheC/D like ATP-grasp Ins_allergen_rp PF06757.13 ORF5240 - 0.035 14.1 0.3 0.23 11.4 0.1 2.2 2 0 0 2 2 2 0 Insect allergen related repeat, nitrile-specifier detoxification ATPgrasp_ST PF14397.6 ORF5240 - 0.039 13.2 0.0 0.17 11.1 0.0 2.0 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp ThiC_Rad_SAM PF01964.18 ORF143434 - 2e-196 652.7 0.0 2.4e-196 652.5 0.0 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family CCDC92 PF14916.6 ORF137578 - 0.045 13.5 0.1 0.12 12.2 0.1 1.7 1 0 0 1 1 1 0 Coiled-coil domain of unknown function EutB PF06751.11 ORF136648 - 2.4e-202 672.5 0.3 2.8e-202 672.3 0.3 1.0 1 0 0 1 1 1 1 Ethanolamine ammonia lyase large subunit (EutB) EutA PF06277.11 ORF136648 - 1.8e-08 33.7 0.4 5.4e-08 32.1 0.1 1.8 2 0 0 2 2 2 1 Ethanolamine utilisation protein EutA CCDC92 PF14916.6 ORF128403 - 0.045 13.5 0.1 0.12 12.2 0.1 1.7 1 0 0 1 1 1 0 Coiled-coil domain of unknown function ATG16 PF08614.11 ORF82665 - 0.0042 17.3 22.4 0.0042 17.3 22.4 3.2 1 1 2 3 3 3 1 Autophagy protein 16 (ATG16) PKcGMP_CC PF16808.5 ORF82665 - 0.056 13.3 8.6 0.88 9.5 0.0 4.5 5 0 0 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF1759 PF03564.15 ORF82665 - 0.1 12.5 1.4 0.56 10.1 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) Fungal_TACC PF12709.7 ORF82665 - 0.67 10.4 7.6 2.4 8.7 0.6 3.5 3 0 0 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins zf-C4H2 PF10146.9 ORF82665 - 1.5 9.1 22.9 0.067 13.5 0.4 2.3 1 1 0 2 2 2 0 Zinc finger-containing protein DUF720 PF05302.11 ORF82665 - 2 8.3 8.7 0.22 11.4 2.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF720) GAS PF13851.6 ORF82665 - 6.9 6.0 39.7 0.014 14.8 3.6 3.8 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding Sugar_tr PF00083.24 ORF81383 - 8.5e-63 212.8 19.8 1.1e-62 212.4 19.8 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF81383 - 3e-11 42.8 33.7 2.3e-10 39.9 30.5 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily Thioredoxin PF00085.20 ORF70218 - 3.3e-07 30.2 1.8 0.00039 20.3 0.2 2.4 2 0 0 2 2 2 2 Thioredoxin OST3_OST6 PF04756.13 ORF70218 - 0.00017 21.0 2.7 0.007 15.8 0.1 2.3 2 0 0 2 2 2 2 OST3 / OST6 family, transporter family DUF772 PF05598.11 ORF70218 - 0.021 14.9 0.0 0.061 13.3 0.0 1.9 1 0 0 1 1 1 0 Transposase domain (DUF772) Thioredoxin_7 PF13899.6 ORF70218 - 0.04 14.1 0.1 0.84 9.9 0.0 2.6 2 0 0 2 2 2 0 Thioredoxin-like Toxin-deaminase PF14424.6 ORF70218 - 0.064 13.4 1.0 2.1 8.4 0.0 2.7 2 0 0 2 2 2 0 The BURPS668_1122 family of deaminases Thioredoxin_2 PF13098.6 ORF70218 - 0.094 13.2 1.1 2 8.9 0.1 2.8 2 0 0 2 2 2 0 Thioredoxin-like domain DUF1722 PF08349.11 ORF70218 - 0.15 12.4 2.1 11 6.4 0.0 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF1722) DUF836 PF05768.14 ORF70218 - 0.9 10.0 3.9 14 6.2 0.2 3.2 3 0 0 3 3 3 0 Glutaredoxin-like domain (DUF836) Keratin_B2_2 PF13885.6 ORF66671 - 0.0015 18.4 127.1 0.25 11.3 40.6 3.8 1 1 1 2 2 2 1 Keratin, high sulfur B2 protein Peptidase_M1 PF01433.20 ORF50644 - 1.4e-32 113.1 0.5 2.6e-32 112.2 0.5 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF50644 - 2.7e-21 76.6 1.0 4.3e-21 76.0 1.0 1.3 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TnpW PF14202.6 ORF50644 - 0.036 13.9 0.1 1.1 9.2 0.0 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW Tim44 PF04280.15 ORF33186 - 1.1e-18 67.8 0.1 1.1e-18 67.8 0.1 3.3 4 1 0 4 4 4 1 Tim44-like domain DUF2321 PF10083.9 ORF33186 - 0.46 10.1 5.2 0.99 9.0 0.6 3.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2321) zf-RING_2 PF13639.6 ORF2007 - 2.2e-07 31.1 9.2 2.2e-07 31.1 9.2 3.6 4 0 0 4 4 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF2007 - 4.7e-06 26.5 6.3 2.3e-05 24.3 6.3 2.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF2007 - 4.2e-05 23.7 7.0 4.2e-05 23.7 7.0 3.3 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF2007 - 0.00011 21.8 8.6 0.00054 19.7 8.6 2.3 1 0 0 1 1 1 1 RING-like zinc finger TMEM154 PF15102.6 ORF2007 - 0.00017 21.5 0.2 0.00042 20.2 0.2 1.6 1 0 0 1 1 1 1 TMEM154 protein family zf-C3HC4 PF00097.25 ORF2007 - 0.00079 19.3 10.9 0.00079 19.3 10.9 2.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF2007 - 0.0017 18.2 8.9 0.0074 16.1 8.9 2.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF2007 - 0.013 15.6 4.4 0.013 15.6 4.4 2.5 3 0 0 3 3 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 ORF2007 - 0.014 15.2 5.6 0.028 14.2 5.6 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zf_RING PF16744.5 ORF2007 - 0.03 14.4 3.3 0.2 11.8 3.3 2.5 1 0 0 1 1 1 0 KIAA1045 RING finger UPF0560 PF10577.9 ORF2007 - 0.081 11.4 0.0 0.13 10.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 zf-C3HC4_4 PF15227.6 ORF2007 - 0.18 12.0 8.8 0.049 13.8 3.6 3.0 3 1 0 3 3 3 0 zinc finger of C3HC4-type, RING SKG6 PF08693.10 ORF2007 - 4.6 6.7 7.2 0.12 11.8 0.7 1.7 2 0 0 2 2 2 0 Transmembrane alpha-helix domain DUF5417 PF17438.2 ORF2007 - 6.6 7.1 6.1 27 5.1 0.0 3.5 4 0 0 4 4 2 0 Family of unknown function (DUF5417) Thioredoxin PF00085.20 ORF147946 - 3.3e-07 30.2 1.8 0.00039 20.3 0.2 2.4 2 0 0 2 2 2 2 Thioredoxin OST3_OST6 PF04756.13 ORF147946 - 0.00017 21.0 2.7 0.007 15.8 0.1 2.3 2 0 0 2 2 2 2 OST3 / OST6 family, transporter family DUF772 PF05598.11 ORF147946 - 0.021 14.9 0.0 0.061 13.3 0.0 1.9 1 0 0 1 1 1 0 Transposase domain (DUF772) Thioredoxin_7 PF13899.6 ORF147946 - 0.04 14.1 0.1 0.84 9.9 0.0 2.6 2 0 0 2 2 2 0 Thioredoxin-like Toxin-deaminase PF14424.6 ORF147946 - 0.064 13.4 1.0 2.1 8.4 0.0 2.7 2 0 0 2 2 2 0 The BURPS668_1122 family of deaminases Thioredoxin_2 PF13098.6 ORF147946 - 0.094 13.2 1.1 2 8.9 0.1 2.8 2 0 0 2 2 2 0 Thioredoxin-like domain DUF1722 PF08349.11 ORF147946 - 0.15 12.4 2.1 11 6.4 0.0 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF1722) DUF836 PF05768.14 ORF147946 - 0.9 10.0 3.9 14 6.2 0.2 3.2 3 0 0 3 3 3 0 Glutaredoxin-like domain (DUF836) FecCD PF01032.18 ORF127577 - 4.7e-85 285.3 28.6 6e-85 285.0 28.6 1.1 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 ORF127577 - 3.6e-06 26.7 15.1 1.3e-05 24.9 15.2 1.7 1 1 0 1 1 1 1 ABC 3 transport family Sec7 PF01369.20 ORF115574 - 0.0025 17.5 0.4 0.017 14.8 0.0 2.5 2 0 0 2 2 2 1 Sec7 domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks15.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks15.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks15.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks15.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:01:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Hormone_5 PF00184.17 ORF66626 - 0.26 12.1 6.1 0.37 11.6 5.5 1.6 1 1 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain Kelch_4 PF13418.6 ORF65962 - 0.00062 19.7 0.1 6 7.0 0.0 3.3 3 0 0 3 3 3 3 Galactose oxidase, central domain Prenyltrans PF00432.21 ORF65962 - 0.088 12.6 1.0 0.24 11.2 0.1 2.1 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat TarH PF02203.15 ORF61717 - 0.012 15.5 0.9 0.13 12.2 0.7 2.2 1 1 1 2 2 2 0 Tar ligand binding domain homologue YtxH PF12732.7 ORF61717 - 0.073 13.6 1.1 0.18 12.3 1.1 1.8 1 1 0 1 1 1 0 YtxH-like protein Virulence_fact PF13769.6 ORF61717 - 0.13 12.5 2.5 0.27 11.5 2.5 1.6 1 0 0 1 1 1 0 Virulence factor FucT_N PF18025.1 ORF57835 - 0.02 15.4 0.7 0.079 13.4 0.3 2.0 2 0 0 2 2 2 0 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain DUF5442 PF17514.2 ORF57835 - 0.047 13.9 0.8 0.15 12.3 0.1 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5442) FBP_C PF16571.5 ORF57344 - 0.45 10.0 4.3 0.23 11.0 2.7 1.4 1 1 0 1 1 1 0 FBP C-terminal treble-clef zinc-finger Mut7-C PF01927.16 ORF57245 - 0.16 12.1 5.4 0.66 10.1 0.0 3.0 3 0 0 3 3 3 0 Mut7-C RNAse domain DUF4122 PF13498.6 ORF55578 - 0.024 14.3 0.2 0.039 13.7 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4122) Meleagrin PF08189.11 ORF54892 - 0.25 11.1 6.5 2.7 7.8 1.4 2.4 2 0 0 2 2 2 0 Meleagrin/Cygnin family zf-C6H2 PF15801.5 ORF54892 - 4.2 7.8 11.0 6.6 7.1 0.5 3.5 2 2 1 3 3 3 0 zf-MYND-like zinc finger, mRNA-binding TED PF08341.11 ORF53225 - 0.076 13.4 0.0 0.091 13.2 0.0 1.2 1 0 0 1 1 1 0 Thioester domain Pkinase PF00069.25 ORF53059 - 5.3e-21 75.2 0.1 1e-20 74.2 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF53059 - 2.7e-10 40.0 0.1 1e-09 38.1 0.0 1.7 1 1 1 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF53059 - 0.0046 16.3 0.0 0.0074 15.6 0.0 1.4 1 0 0 1 1 1 1 Kinase-like ATP-synt_S1 PF05827.12 ORF53059 - 0.2 11.5 2.3 1 9.2 1.3 2.0 1 1 1 2 2 2 0 Vacuolar ATP synthase subunit S1 (ATP6S1) GTPase_binding PF09027.10 ORF52590 - 0.12 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 GTPase binding N-glycanase_C PF09113.10 ORF5215 - 0.02 14.7 0.3 0.026 14.3 0.3 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal SCIFF PF13165.6 ORF52064 - 0.29 11.1 4.6 2.5 8.1 0.8 2.4 2 0 0 2 2 2 0 Six-cysteine peptide SCIFF DUF1922 PF09082.10 ORF51949 - 0.095 13.0 1.7 0.13 12.5 0.9 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1922) Cdd1 PF11731.8 ORF50158 - 0.07 13.4 0.3 0.13 12.5 0.3 1.4 1 0 0 1 1 1 0 Pathogenicity locus DUF4302 PF14135.6 ORF50158 - 0.12 12.3 2.9 6.6 6.6 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4302) FAF PF11250.8 ORF48881 - 0.087 13.1 0.1 0.22 11.8 0.1 1.6 1 0 0 1 1 1 0 Fantastic Four meristem regulator Beach PF02138.18 ORF47071 - 1e-15 57.9 0.1 1.8e-15 57.1 0.1 1.4 1 0 0 1 1 1 1 Beige/BEACH domain PH_BEACH PF14844.6 ORF47071 - 4.8e-08 33.0 0.2 8.6e-08 32.2 0.2 1.4 1 0 0 1 1 1 1 PH domain associated with Beige/BEACH DnaB_2 PF07261.11 ORF47071 - 0.01 15.5 0.2 0.043 13.6 0.2 1.9 1 1 0 1 1 1 0 Replication initiation and membrane attachment PG_binding_2 PF08823.11 ORF4684 - 0.0028 17.9 0.0 0.034 14.4 0.0 2.3 2 0 0 2 2 2 1 Putative peptidoglycan binding domain ICEA PF05315.11 ORF4446 - 0.3 10.5 0.4 0.43 10.0 0.4 1.1 1 0 0 1 1 1 0 ICEA Protein Pkinase PF00069.25 ORF44314 - 1.1e-14 54.4 0.6 1.4e-14 54.1 0.6 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44314 - 9.3e-09 34.9 0.2 1.1e-08 34.8 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF44314 - 0.063 12.9 0.3 0.076 12.6 0.3 1.1 1 0 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF44314 - 0.13 11.6 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Ribosomal_L21e PF01157.18 ORF43650 - 2.2e-30 104.5 4.6 2.2e-30 104.5 4.6 1.5 1 1 1 2 2 2 1 Ribosomal protein L21e MCR_alpha_N PF02745.15 ORF42616 - 0.03 13.7 0.1 0.033 13.5 0.1 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, N-terminal domain Gpr1_Fun34_YaaH PF01184.19 ORF42616 - 0.053 13.1 1.1 0.089 12.4 0.2 1.7 2 0 0 2 2 2 0 GPR1/FUN34/yaaH family ComFB PF10719.9 ORF41495 - 0.042 13.9 0.1 0.087 12.9 0.1 1.5 1 0 0 1 1 1 0 Late competence development protein ComFB PqiA PF04403.13 ORF41185 - 3.5e-51 173.1 10.9 3.9e-51 173.0 10.9 1.0 1 0 0 1 1 1 1 Paraquat-inducible protein A Lysis_col PF02402.16 ORF38135 - 0.64 9.7 2.2 4.5 7.0 0.0 2.8 2 1 1 3 3 3 0 Lysis protein SNAD4 PF18750.1 ORF36501 - 0.076 13.1 2.4 0.12 12.5 2.4 1.4 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 TarH PF02203.15 ORF34758 - 0.012 15.5 0.9 0.13 12.2 0.7 2.2 1 1 1 2 2 2 0 Tar ligand binding domain homologue YtxH PF12732.7 ORF34758 - 0.073 13.6 1.1 0.18 12.3 1.1 1.8 1 1 0 1 1 1 0 YtxH-like protein Virulence_fact PF13769.6 ORF34758 - 0.13 12.5 2.5 0.27 11.5 2.5 1.6 1 0 0 1 1 1 0 Virulence factor MFS_1 PF07690.16 ORF33634 - 4.6e-10 39.0 23.3 5.3e-10 38.8 23.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF33634 - 2.2e-09 36.7 8.6 2.4e-09 36.6 8.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter NMN_transporter PF04973.12 ORF33634 - 0.61 10.0 9.8 4.6 7.2 3.3 2.2 2 0 0 2 2 2 0 Nicotinamide mononucleotide transporter zf-C3HC4_3 PF13920.6 ORF33350 - 0.078 12.9 1.5 0.13 12.1 1.5 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF3742 PF12553.8 ORF3255 - 0.085 13.0 0.2 0.11 12.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) zf-AN1 PF01428.16 ORF32042 - 2.7e-08 33.8 13.8 2.7e-08 33.8 13.8 1.7 2 0 0 2 2 2 1 AN1-like Zinc finger zf-HC5HC2H PF13771.6 ORF32042 - 5 7.4 13.3 0.38 11.0 7.9 1.9 2 1 0 2 2 2 0 PHD-like zinc-binding domain zf-RanBP PF00641.18 ORF2949 - 0.00067 18.9 1.6 0.00067 18.9 1.6 4.3 3 1 0 3 3 3 1 Zn-finger in Ran binding protein and others Leader_CPA1 PF08252.11 ORF26722 - 0.16 11.4 0.8 0.45 10.0 0.8 1.8 1 0 0 1 1 1 0 arg-2/CPA1 leader peptide AMMECR1 PF01871.17 ORF23703 - 2.1e-37 128.3 0.0 2.4e-37 128.1 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 CorA PF01544.18 ORF20799 - 0.018 14.3 0.4 0.021 14.2 0.4 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF4201 PF13870.6 ORF20799 - 0.033 13.9 1.4 0.057 13.2 1.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) Dzip-like_N PF13815.6 ORF20799 - 0.038 14.0 0.4 0.052 13.5 0.4 1.3 1 0 0 1 1 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal FHA_2 PF17913.1 ORF20799 - 0.039 14.2 0.1 0.072 13.3 0.1 1.5 1 0 0 1 1 1 0 FHA domain DMPK_coil PF08826.10 ORF20799 - 0.059 13.5 1.0 0.37 10.9 0.7 2.1 2 0 0 2 2 2 0 DMPK coiled coil domain like TFIID_20kDa PF03847.13 ORF20799 - 0.15 12.6 2.1 1.3 9.6 2.1 2.4 1 1 0 1 1 1 0 Transcription initiation factor TFIID subunit A DUF4064 PF13273.6 ORF20229 - 0.062 13.6 0.1 0.094 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) ERGIC_N PF13850.6 ORF20229 - 0.065 13.6 0.1 0.1 12.9 0.1 1.4 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) MSP1a PF11670.8 ORF20229 - 0.13 11.5 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) CdiI_N PF18228.1 ORF16840 - 0.034 14.0 2.0 0.059 13.2 0.4 2.1 1 1 1 2 2 2 0 CdiI N-terminal domain SMC_Nse1 PF07574.13 ORF16840 - 0.096 12.6 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex Syja_N PF02383.18 ORF16815 - 0.06 12.7 0.1 0.062 12.6 0.1 1.1 1 0 0 1 1 1 0 SacI homology domain Cytochrom_B_C PF00032.17 ORF16280 - 5.8e-12 45.8 0.7 5.8e-12 45.8 0.7 1.5 2 0 0 2 2 2 1 Cytochrome b(C-terminal)/b6/petD Pkinase PF00069.25 ORF15609 - 1.1e-14 54.4 0.6 1.4e-14 54.1 0.6 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF15609 - 9.3e-09 34.9 0.2 1.1e-08 34.8 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF15609 - 0.063 12.9 0.3 0.076 12.6 0.3 1.1 1 0 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF15609 - 0.13 11.6 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Trp_repressor PF01371.19 ORF152927 - 5.6e-28 96.9 0.0 7.2e-28 96.6 0.0 1.1 1 0 0 1 1 1 1 Trp repressor protein Sec20 PF03908.13 ORF152848 - 5.2e-07 29.5 0.6 1e-06 28.6 0.6 1.5 1 0 0 1 1 1 1 Sec20 DASH_Duo1 PF08651.10 ORF152848 - 0.31 10.9 2.0 0.38 10.6 0.5 1.9 2 0 0 2 2 2 0 DASH complex subunit Duo1 EF-hand_8 PF13833.6 ORF151744 - 9.8e-07 28.5 1.7 3.8e-05 23.5 1.2 2.9 2 1 0 2 2 2 1 EF-hand domain pair UPF0154 PF03672.13 ORF151744 - 6.6e-05 22.9 0.1 0.00078 19.4 0.1 2.1 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0154) EF-hand_7 PF13499.6 ORF151744 - 0.0019 18.6 0.6 0.0061 17.0 0.2 2.0 2 0 0 2 2 2 1 EF-hand domain pair DUF2000 PF09391.10 ORF151744 - 0.047 13.6 0.0 0.13 12.2 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2000) RNA_pol_Rpb4 PF03874.16 ORF151744 - 0.11 12.9 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase Rpb4 DUF3008 PF11450.8 ORF151744 - 0.23 11.7 1.7 0.7 10.1 0.4 2.2 2 0 0 2 2 2 0 Protein of unknwon function (DUF3008) CbiQ PF02361.16 ORF151048 - 0.19 11.4 3.1 0.22 11.1 3.1 1.1 1 0 0 1 1 1 0 Cobalt transport protein HTH_40 PF14493.6 ORF15075 - 0.002 18.6 2.4 0.0084 16.5 2.4 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain Streptin-Immun PF11083.8 ORF15075 - 0.097 13.1 1.9 0.19 12.2 1.9 1.4 1 0 0 1 1 1 0 Lantibiotic streptin immunity protein zf-C4H2 PF10146.9 ORF15075 - 1.2 9.5 4.1 1.7 8.9 4.1 1.4 1 1 0 1 1 1 0 Zinc finger-containing protein DUF2689 PF10894.8 ORF150506 - 0.079 12.7 0.1 0.18 11.6 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2689) CvfB_WH PF17783.1 ORF149332 - 0.14 12.0 0.4 3.7 7.4 0.0 2.5 2 1 0 2 2 2 0 CvfB-like winged helix domain Rtf2 PF04641.12 ORF147307 - 0.0062 15.9 0.1 0.012 15.0 0.1 1.4 1 1 0 1 1 1 1 Rtf2 RING-finger zf-C2HE PF16278.5 ORF147241 - 0.074 13.5 0.2 0.12 12.8 0.2 1.3 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger Fer4_8 PF13183.6 ORF146982 - 0.063 13.7 3.5 0.087 13.3 2.7 1.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain DUF3665 PF12427.8 ORF14696 - 2.1 8.1 3.7 0.94 9.2 0.5 1.9 2 0 0 2 2 2 0 Branched-chain amino acid aminotransferase Ferlin_C PF16165.5 ORF146748 - 0.00027 20.9 0.0 0.00035 20.5 0.0 1.2 1 0 0 1 1 1 1 Ferlin C-terminus C2 PF00168.30 ORF146748 - 0.0017 18.6 0.0 0.0027 18.0 0.0 1.3 1 0 0 1 1 1 1 C2 domain GhoS PF11080.8 ORF145975 - 3.8e-32 110.1 0.0 5.1e-32 109.7 0.0 1.1 1 0 0 1 1 1 1 Endoribonuclease GhoS Spike_rec_bind PF09408.10 ORF145975 - 0.04 13.6 0.2 0.59 9.8 0.1 2.1 1 1 1 2 2 2 0 Spike receptor binding domain Tuberculin PF12198.8 ORF145975 - 0.1 12.7 0.1 0.23 11.6 0.1 1.5 1 0 0 1 1 1 0 Theoretical tuberculin protein DUF825 PF05695.12 ORF145306 - 0.15 9.2 0.3 0.15 9.2 0.3 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF825) Homeodomain PF00046.29 ORF145265 - 0.0017 18.1 0.1 0.0039 17.0 0.1 1.6 1 0 0 1 1 1 1 Homeodomain DUF4778 PF16008.5 ORF145265 - 0.016 15.3 6.2 0.018 15.1 6.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) LtuB PF17455.2 ORF145265 - 1 10.0 6.2 16 6.2 3.7 2.4 2 0 0 2 2 2 0 Late transcription unit B Peptidase_C97 PF05903.14 ORF144088 - 0.00091 19.1 0.3 0.0012 18.7 0.3 1.2 1 0 0 1 1 1 1 PPPDE putative peptidase domain LRAT PF04970.13 ORF144088 - 0.018 15.4 0.2 0.026 14.8 0.2 1.3 1 0 0 1 1 1 0 Lecithin retinol acyltransferase Mso1_Sec1_bdg PF14475.6 ORF143906 - 0.17 11.5 0.0 0.3 10.7 0.0 1.4 1 0 0 1 1 1 0 Sec1-binding region of Mso1 CHCH PF06747.13 ORF142351 - 0.0064 16.6 11.5 0.19 11.9 4.2 3.0 3 0 0 3 3 3 2 CHCH domain CX9C PF16860.5 ORF142351 - 0.089 12.8 4.8 0.22 11.6 0.1 2.7 4 0 0 4 4 4 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, LMBR1 PF04791.16 ORF141478 - 0.035 13.0 5.8 0.042 12.8 5.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein zf-RanBP PF00641.18 ORF141458 - 0.00067 18.9 1.6 0.00067 18.9 1.6 4.3 3 1 0 3 3 3 1 Zn-finger in Ran binding protein and others CitMHS PF03600.16 ORF14100 - 3.7e-13 49.4 15.5 8.2e-13 48.2 15.5 1.5 1 1 0 1 1 1 1 Citrate transporter Na_sulph_symp PF00939.19 ORF14100 - 2e-07 30.5 9.8 2.8e-07 29.9 9.8 1.2 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region Pox_I5 PF04713.12 ORF14100 - 0.055 13.5 0.4 1.5 8.9 0.0 2.3 2 0 0 2 2 2 0 Poxvirus protein I5 Abhydrolase_3 PF07859.13 ORF139005 - 4e-11 43.2 0.0 4.5e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Phage_HK97_TLTM PF06120.11 ORF139 - 0.018 14.3 1.3 0.021 14.0 1.3 1.1 1 0 0 1 1 1 0 Tail length tape measure protein Alba PF01918.21 ORF137602 - 6.9e-16 57.8 0.1 1e-15 57.3 0.1 1.3 1 0 0 1 1 1 1 Alba CATSPERB PF15149.6 ORF136140 - 0.27 9.7 0.1 0.37 9.3 0.1 1.1 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit beta protein family IGFBP PF00219.18 ORF135056 - 0.54 11.0 9.5 1 10.0 9.5 1.6 1 0 0 1 1 1 0 Insulin-like growth factor binding protein EamA PF00892.20 ORF131885 - 0.00094 19.4 4.8 0.0012 19.1 4.8 1.1 1 0 0 1 1 1 1 EamA-like transporter family Phage_holin_4_2 PF04020.13 ORF131885 - 0.6 10.8 8.0 0.92 10.2 8.0 1.3 1 0 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV UQ_con PF00179.26 ORF130207 - 3.4e-35 120.7 0.0 4e-35 120.5 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme GreA_GreB_N PF03449.15 ORF129934 - 4e-32 110.2 1.0 5.4e-32 109.8 1.0 1.2 1 0 0 1 1 1 1 Transcription elongation factor, N-terminal GreA_GreB PF01272.19 ORF129934 - 1e-29 102.3 0.3 1.4e-29 101.8 0.3 1.2 1 0 0 1 1 1 1 Transcription elongation factor, GreA/GreB, C-term DDR_swiveling PF18427.1 ORF129934 - 0.0061 16.6 0.2 0.069 13.2 0.1 2.1 1 1 1 2 2 2 1 DD-reactivating factor swiveling domain Sperm_Ag_HE2 PF05324.13 ORF127858 - 0.14 12.7 0.1 0.29 11.6 0.1 1.5 1 0 0 1 1 1 0 Sperm antigen HE2 zf-RanBP PF00641.18 ORF127673 - 0.00067 18.9 1.6 0.00067 18.9 1.6 4.3 3 1 0 3 3 3 1 Zn-finger in Ran binding protein and others FWWh PF14922.6 ORF127185 - 4e-13 49.5 0.2 5.1e-13 49.2 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function CvfB_WH PF17783.1 ORF126272 - 0.14 12.0 0.4 3.7 7.4 0.0 2.5 2 1 0 2 2 2 0 CvfB-like winged helix domain Ephrin_rec_like PF07699.13 ORF123981 - 0.072 12.9 0.1 0.15 11.9 0.1 1.5 1 0 0 1 1 1 0 Putative ephrin-receptor like Peptidase_S9 PF00326.21 ORF122597 - 2.2e-47 161.3 0.1 2.4e-47 161.2 0.1 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF4497 PF14924.6 ORF121787 - 0.0004 20.8 0.0 0.0007 20.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF4497) DUF423 PF04241.15 ORF12172 - 0.0089 16.2 0.2 0.015 15.5 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF423) TMEM51 PF15345.6 ORF121005 - 8.4 6.2 10.4 32 4.2 8.6 2.0 1 1 1 2 2 2 0 Transmembrane protein 51 LRAT PF04970.13 ORF117673 - 0.011 16.0 0.3 0.016 15.5 0.3 1.4 1 1 0 1 1 1 0 Lecithin retinol acyltransferase Zemlya PF17646.1 ORF117673 - 0.051 13.9 0.0 3.5 8.0 0.0 2.3 1 1 1 2 2 2 0 Closterovirus 1a polyprotein central region PH PF00169.29 ORF112048 - 0.011 16.3 0.0 0.017 15.6 0.0 1.4 1 1 0 1 1 1 0 PH domain CTNNBL PF08216.11 ORF111964 - 0.003 17.7 2.2 0.0031 17.7 0.4 2.0 2 0 0 2 2 2 1 Catenin-beta-like, Arm-motif containing nuclear ANAPC3 PF12895.7 ORF111954 - 0.0031 17.7 0.0 0.0042 17.3 0.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 EF-hand_1 PF00036.32 ORF111316 - 7.7e-22 75.2 4.5 9.7e-06 24.8 0.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF111316 - 4.2e-20 72.0 4.1 9.4e-10 38.8 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF111316 - 8.5e-18 62.7 2.1 0.00018 21.2 0.0 4.5 3 1 1 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF111316 - 5e-13 48.7 7.6 2.2e-05 24.2 2.0 3.7 2 2 2 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF111316 - 1e-12 46.9 1.0 4e-05 22.9 0.0 4.1 4 0 0 4 4 4 3 EF hand SPARC_Ca_bdg PF10591.9 ORF111316 - 4.2e-07 30.3 0.3 0.037 14.3 0.0 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF111316 - 8.1e-07 28.0 0.0 0.00016 20.4 0.0 2.0 1 1 1 2 2 2 2 Family of unknown function (DUF5580) EF-hand_4 PF12763.7 ORF111316 - 0.0001 22.2 2.6 0.052 13.5 0.7 2.3 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF111316 - 0.00067 19.9 0.3 0.008 16.5 0.2 2.1 2 0 0 2 2 2 1 EF-hand domain GlutR_dimer PF00745.20 ORF111316 - 0.0032 17.9 0.2 0.14 12.6 0.0 2.2 1 1 1 2 2 2 1 Glutamyl-tRNAGlu reductase, dimerisation domain DUF5109 PF17134.4 ORF111316 - 0.024 14.6 0.4 5.2 7.0 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5109) EF-hand_10 PF14788.6 ORF111316 - 0.044 13.7 0.6 7.7 6.5 0.0 3.3 3 1 1 4 4 4 0 EF hand Stirrup PF09061.6 ORF111316 - 0.19 12.0 0.6 2.2 8.5 0.0 2.3 2 1 0 2 2 2 0 Stirrup S_100 PF01023.19 ORF111316 - 0.3 10.8 1.7 30 4.4 0.0 2.9 2 1 1 3 3 3 0 S-100/ICaBP type calcium binding domain NAC PF01849.18 ORF110553 - 2.2e-25 88.4 0.0 4e-25 87.5 0.0 1.4 1 0 0 1 1 1 1 NAC domain dCache_1 PF02743.18 ORF110553 - 0.031 14.1 0.0 0.038 13.8 0.0 1.2 1 0 0 1 1 1 0 Cache domain DUF3293 PF11697.8 ORF110553 - 0.055 14.0 0.0 0.13 12.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3293) DUF4710 PF15828.5 ORF110537 - 7.2 6.8 10.3 1 9.5 5.4 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4710) CorA PF01544.18 ORF110068 - 0.018 14.3 0.4 0.021 14.2 0.4 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF4201 PF13870.6 ORF110068 - 0.033 13.9 1.4 0.057 13.2 1.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) Dzip-like_N PF13815.6 ORF110068 - 0.038 14.0 0.4 0.052 13.5 0.4 1.3 1 0 0 1 1 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal FHA_2 PF17913.1 ORF110068 - 0.039 14.2 0.1 0.072 13.3 0.1 1.5 1 0 0 1 1 1 0 FHA domain DMPK_coil PF08826.10 ORF110068 - 0.059 13.5 1.0 0.37 10.9 0.7 2.1 2 0 0 2 2 2 0 DMPK coiled coil domain like TFIID_20kDa PF03847.13 ORF110068 - 0.15 12.6 2.1 1.3 9.6 2.1 2.4 1 1 0 1 1 1 0 Transcription initiation factor TFIID subunit A Acetyltransf_1 PF00583.25 ORF109495 - 1.4e-12 47.9 0.0 1.8e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 ORF109495 - 7.6e-11 42.2 0.0 1.4e-10 41.3 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF109495 - 8.1e-11 42.0 0.0 9.1e-11 41.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF109495 - 1.7e-08 34.8 0.0 2.2e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF109495 - 8.7e-05 22.4 0.2 0.00021 21.2 0.2 1.6 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_5 PF13444.6 ORF109495 - 0.002 18.8 0.1 0.0073 17.0 0.1 2.0 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF109495 - 0.097 12.8 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase DUF4077 PF13295.6 ORF109011 - 0.031 14.2 2.7 0.043 13.8 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) PCSK9_C3 PF18463.1 ORF105957 - 1.1e-05 25.6 3.5 0.00071 19.8 0.1 2.2 2 0 0 2 2 2 2 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Sperm_Ag_HE2 PF05324.13 ORF105700 - 0.14 12.7 0.1 0.29 11.6 0.1 1.5 1 0 0 1 1 1 0 Sperm antigen HE2 DctQ PF04290.12 ORF103487 - 0.1 12.5 0.2 0.14 12.0 0.2 1.1 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component TMEM190 PF15431.6 ORF103250 - 0.02 15.0 0.1 0.032 14.4 0.1 1.5 1 1 0 1 1 1 0 Transmembrane protein 190 Kelch_1 PF01344.25 ORF102835 - 2.1e-18 65.6 0.8 3.6e-06 26.5 0.2 3.4 3 1 0 3 3 3 3 Kelch motif Kelch_6 PF13964.6 ORF102835 - 1e-14 54.2 0.1 0.00081 19.6 0.1 3.3 2 1 1 3 3 3 3 Kelch motif Kelch_4 PF13418.6 ORF102835 - 5.2e-10 39.2 2.9 0.00051 20.0 0.0 4.1 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF102835 - 8e-08 32.1 2.4 0.017 15.1 0.2 3.3 3 1 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 ORF102835 - 1.9e-06 27.6 0.8 0.36 10.9 0.4 3.5 3 1 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 ORF102835 - 5.7e-06 26.5 0.5 0.53 10.7 0.0 3.8 3 1 0 3 3 3 2 Galactose oxidase, central domain DUF4381 PF14316.6 ORF102585 - 0.028 14.7 2.3 0.04 14.2 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) CorA PF01544.18 ORF101232 - 0.018 14.3 0.4 0.021 14.2 0.4 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF4201 PF13870.6 ORF101232 - 0.033 13.9 1.4 0.057 13.2 1.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) Dzip-like_N PF13815.6 ORF101232 - 0.038 14.0 0.4 0.052 13.5 0.4 1.3 1 0 0 1 1 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal FHA_2 PF17913.1 ORF101232 - 0.039 14.2 0.1 0.072 13.3 0.1 1.5 1 0 0 1 1 1 0 FHA domain DMPK_coil PF08826.10 ORF101232 - 0.059 13.5 1.0 0.37 10.9 0.7 2.1 2 0 0 2 2 2 0 DMPK coiled coil domain like TFIID_20kDa PF03847.13 ORF101232 - 0.15 12.6 2.1 1.3 9.6 2.1 2.4 1 1 0 1 1 1 0 Transcription initiation factor TFIID subunit A RNase_E_G PF10150.9 ORF100754 - 0.29 10.5 5.6 0.34 10.3 5.6 1.2 1 0 0 1 1 1 0 Ribonuclease E/G family Patched PF02460.18 ORF100754 - 1.2 7.2 5.8 1.4 6.9 5.8 1.0 1 0 0 1 1 1 0 Patched family Mer2 PF09074.10 ORF100754 - 1.9 8.3 8.6 2.5 7.9 8.6 1.1 1 0 0 1 1 1 0 Mer2 DUF349 PF03993.12 ORF100754 - 8.6 6.7 9.4 1.6 9.1 4.5 2.2 2 1 0 2 2 2 0 Domain of Unknown Function (DUF349) QueH PF02677.14 ORF100333 - 0.044 13.9 0.5 0.061 13.4 0.5 1.3 1 0 0 1 1 1 0 Epoxyqueuosine reductase QueH Leu_leader PF08054.11 NODE_43022_length_469_cov_1.320276_g35370_i0forward_frame_1 - 3.7e-13 48.8 4.1 6.6e-13 48.0 4.1 1.5 1 0 0 1 1 1 1 Leucine operon leader peptide PX PF00787.24 NODE_43016_length_469_cov_2.377880_g35365_i0reverse_frame_1 - 6.4e-10 39.0 0.5 9.8e-10 38.4 0.5 1.3 1 0 0 1 1 1 1 PX domain HTH_23 PF13384.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 1.5e-05 24.6 0.1 2.7e-05 23.8 0.1 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 4.4e-05 23.4 0.0 7.3e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_28 PF13518.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 8e-05 22.7 0.3 0.00016 21.8 0.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_7 PF02796.15 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.0012 18.9 0.0 0.0018 18.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Mor PF08765.11 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.0069 16.4 0.0 0.0095 15.9 0.0 1.2 1 0 0 1 1 1 1 Mor transcription activator family HTH_IclR PF09339.10 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.0078 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_26 PF13443.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.0094 16.4 0.0 0.016 15.6 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_11 PF08279.12 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.03 14.3 0.0 0.044 13.7 0.0 1.3 1 0 0 1 1 1 0 HTH domain HTH_17 PF12728.7 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.043 14.0 0.1 0.072 13.3 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_IS630 PF01710.16 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.068 13.2 0.0 0.093 12.8 0.0 1.1 1 0 0 1 1 1 0 Transposase Phage_AlpA PF05930.12 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.085 12.7 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) HTH_Tnp_1 PF01527.20 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_1 - 0.086 13.2 0.1 0.14 12.5 0.1 1.3 1 0 0 1 1 1 0 Transposase TraH PF06122.11 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 0.0024 17.2 10.7 0.0033 16.8 10.7 1.1 1 0 0 1 1 1 1 Conjugative relaxosome accessory transposon protein MAD PF05557.13 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 0.007 14.8 9.3 0.0084 14.5 9.3 1.1 1 0 0 1 1 1 1 Mitotic checkpoint protein MFS_Mycoplasma PF07672.13 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 0.031 13.6 1.9 0.038 13.3 1.9 1.1 1 0 0 1 1 1 0 Mycoplasma MFS transporter HTH_AsnC-type PF13404.6 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 0.74 9.7 3.1 4.9 7.1 0.5 2.9 1 1 2 3 3 3 0 AsnC-type helix-turn-helix domain TFIIA PF03153.13 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_1 - 6.8 6.6 13.3 7 6.5 13.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit CHORD PF04968.12 NODE_42994_length_469_cov_62.935484_g35343_i0forward_frame_1 - 0.0065 17.2 0.0 0.015 16.0 0.0 1.6 1 0 0 1 1 1 1 CHORD Actin PF00022.19 NODE_42979_length_469_cov_113.124424_g35328_i0reverse_frame_1 - 1.7e-14 53.2 0.0 2e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Actin MreB_Mbl PF06723.13 NODE_42979_length_469_cov_113.124424_g35328_i0reverse_frame_1 - 0.021 13.7 0.0 0.027 13.3 0.0 1.1 1 0 0 1 1 1 0 MreB/Mbl protein PDZ PF00595.24 NODE_42977_length_469_cov_137.308756_g35326_i0reverse_frame_1 - 0.043 14.2 0.0 0.074 13.4 0.0 1.4 1 0 0 1 1 1 0 PDZ domain Csm1_N PF18504.1 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.00094 19.5 7.2 0.00094 19.5 7.2 1.8 1 1 1 2 2 2 1 Csm1 N-terminal domain KxDL PF10241.9 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.027 14.7 7.8 0.027 14.7 7.8 1.9 1 1 1 2 2 2 0 Uncharacterized conserved protein DUF641 PF04859.12 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.074 13.4 8.9 0.079 13.3 7.8 1.6 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) TMF_TATA_bd PF12325.8 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.13 12.4 11.5 0.18 12.1 11.5 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding UPF0242 PF06785.11 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 0.3 11.1 11.6 0.39 10.8 11.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ZapB PF06005.12 NODE_42954_length_470_cov_1.873563_g35308_i0reverse_frame_1 - 2.6 8.6 13.5 1.8 9.1 7.8 2.3 2 0 0 2 2 2 0 Cell division protein ZapB Cytochrome_C7 PF14522.6 NODE_42947_length_470_cov_2.526437_g35301_i0reverse_frame_1 - 0.081 12.9 2.8 0.13 12.3 2.8 1.4 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c HAD_2 PF13419.6 NODE_42946_length_470_cov_2.572414_g35300_i0reverse_frame_1 - 0.035 14.2 0.1 0.046 13.8 0.1 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase TMEM100 PF16311.5 NODE_42934_length_470_cov_5.367816_g35288_i0forward_frame_1 - 0.017 14.7 0.7 0.03 13.9 0.7 1.4 1 0 0 1 1 1 0 Transmembrane protein 100 DUF3502 PF12010.8 NODE_42933_length_470_cov_9.685057_g35287_i0forward_frame_1 - 0.02 15.6 0.1 0.026 15.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) Zn_Tnp_IS1595 PF12760.7 NODE_42928_length_470_cov_50.967816_g35282_i0forward_frame_1 - 0.0064 16.5 0.6 0.011 15.7 0.6 1.5 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Mu-like_Com PF10122.9 NODE_42928_length_470_cov_50.967816_g35282_i0forward_frame_1 - 0.029 13.8 2.1 0.071 12.6 0.1 2.3 1 1 1 2 2 2 0 Mu-like prophage protein Com Ribosomal_S27e PF01667.17 NODE_42928_length_470_cov_50.967816_g35282_i0forward_frame_1 - 0.061 13.0 1.3 0.12 12.1 1.3 1.5 1 0 0 1 1 1 0 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 NODE_42928_length_470_cov_50.967816_g35282_i0forward_frame_1 - 0.062 12.8 0.2 0.11 12.1 0.2 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding zf-Sec23_Sec24 PF04810.15 NODE_42928_length_470_cov_50.967816_g35282_i0forward_frame_1 - 0.16 12.0 1.0 4.2 7.5 0.1 2.2 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger zinc_ribbon_5 PF13719.6 NODE_42928_length_470_cov_50.967816_g35282_i0forward_frame_1 - 0.18 11.6 9.3 0.16 11.8 5.9 2.5 2 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_12 PF11331.8 NODE_42928_length_470_cov_50.967816_g35282_i0forward_frame_1 - 0.2 11.5 2.5 1.1 9.2 0.2 2.5 1 1 1 2 2 2 0 Probable zinc-ribbon domain Nudix_N_2 PF14803.6 NODE_42928_length_470_cov_50.967816_g35282_i0forward_frame_1 - 1.3 9.0 6.0 16 5.5 5.8 2.3 1 1 1 2 2 2 0 Nudix N-terminal AP2 PF00847.20 NODE_42927_length_470_cov_56.719540_g35281_i0forward_frame_1 - 0.00065 19.9 3.2 0.0045 17.2 0.2 2.8 2 1 0 2 2 2 2 AP2 domain 5HT_transport_N PF03491.13 NODE_42924_length_470_cov_73.894253_g35278_i0reverse_frame_1 - 0.3 11.3 2.3 0.93 9.7 2.3 1.8 1 0 0 1 1 1 0 Serotonin (5-HT) neurotransmitter transporter, N-terminus MOSC PF03473.17 NODE_42922_length_470_cov_75.218391_g35276_i0forward_frame_1 - 0.048 13.7 0.5 0.065 13.3 0.5 1.1 1 0 0 1 1 1 0 MOSC domain Ribosomal_S27 PF01599.19 NODE_42908_length_470_cov_128.397701_g35263_i0reverse_frame_1 - 0.12 12.6 0.1 0.12 12.6 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein S27a zf-C2H2_4 PF13894.6 NODE_42896_length_470_cov_490.388506_g35251_i0reverse_frame_1 - 0.0021 18.7 1.3 0.011 16.5 1.3 2.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_42896_length_470_cov_490.388506_g35251_i0reverse_frame_1 - 0.0038 17.6 1.7 0.01 16.2 1.1 2.1 1 1 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 NODE_42896_length_470_cov_490.388506_g35251_i0reverse_frame_1 - 0.11 12.5 2.5 0.2 11.7 2.2 1.7 1 1 0 1 1 1 0 C2H2-type zinc finger DUF4918 PF16265.5 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_1 - 0.067 12.7 0.6 0.083 12.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) zf-C2HC5 PF06221.13 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_1 - 0.15 12.1 0.4 0.15 12.1 0.4 1.7 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type PSI_PsaE PF02427.17 NODE_42891_length_470_cov_2427.287356_g34665_i1reverse_frame_1 - 5.7e-24 83.6 1.3 8e-24 83.1 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE Cas_TM1802 PF09484.10 NODE_42891_length_470_cov_2427.287356_g34665_i1forward_frame_1 - 0.26 10.0 0.1 0.32 9.7 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) RVP_2 PF08284.11 NODE_42879_length_471_cov_3.032110_g35238_i0reverse_frame_1 - 0.046 13.5 0.0 0.069 12.9 0.0 1.3 1 0 0 1 1 1 0 Retroviral aspartyl protease Chorion_2 PF03964.15 NODE_42856_length_471_cov_100.481651_g35216_i0reverse_frame_1 - 0.33 11.8 2.7 0.23 12.3 1.4 1.4 1 1 0 1 1 1 0 Chorion family 2 PARM PF17061.5 NODE_42856_length_471_cov_100.481651_g35216_i0forward_frame_1 - 0.021 15.0 1.1 0.024 14.8 1.1 1.1 1 0 0 1 1 1 0 PARM zf-C3HC4_2 PF13923.6 NODE_42854_length_471_cov_114.635321_g35214_i0forward_frame_1 - 0.2 11.5 2.9 1.7 8.6 0.7 2.4 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) mTERF PF02536.14 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 5.7e-16 58.3 0.0 6.3e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 mTERF HTH_3 PF01381.22 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.026 14.6 0.0 10 6.3 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix HTH_37 PF13744.6 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.059 13.3 0.0 3.7 7.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain TAL_effector PF03377.13 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.072 13.4 0.1 18 5.7 0.0 2.5 2 0 0 2 2 2 0 TAL effector repeat UBA_6 PF18039.1 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.088 12.7 0.0 17 5.4 0.0 3.0 2 1 1 3 3 3 0 UBA-like domain ATP_Ca_trans_C PF12424.8 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_1 - 0.097 13.2 0.0 11 6.5 0.0 2.2 2 0 0 2 2 2 0 Plasma membrane calcium transporter ATPase C terminal DUF3701 PF12482.8 NODE_42853_length_471_cov_117.633028_g35213_i0forward_frame_1 - 0.051 13.6 1.1 8 6.6 0.1 2.3 1 1 1 2 2 2 0 Phage integrase protein Microvir_lysis PF04517.12 NODE_42853_length_471_cov_117.633028_g35213_i0forward_frame_1 - 0.054 13.4 8.2 0.91 9.5 0.2 2.5 3 0 0 3 3 3 0 Microvirus lysis protein (E), C terminus HNH_3 PF13392.6 NODE_42853_length_471_cov_117.633028_g35213_i0forward_frame_1 - 0.13 12.1 1.6 10 6.0 0.0 2.7 3 0 0 3 3 3 0 HNH endonuclease AP2 PF00847.20 NODE_42843_length_471_cov_170.426606_g35203_i0reverse_frame_1 - 0.00011 22.4 6.8 0.0016 18.6 0.5 2.7 3 0 0 3 3 3 2 AP2 domain DUF2188 PF09954.9 NODE_42843_length_471_cov_170.426606_g35203_i0reverse_frame_1 - 0.65 10.2 6.1 0.27 11.4 0.3 2.9 3 1 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2188) RIG-I_C PF18119.1 NODE_42821_length_472_cov_1.608696_g35183_i0forward_frame_3 - 0.0061 16.6 0.0 0.0078 16.2 0.0 1.2 1 0 0 1 1 1 1 RIG-I receptor C-terminal domain DUF5530 PF17670.1 NODE_42820_length_472_cov_2.052632_g35182_i0forward_frame_2 - 0.019 14.7 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5530) DUF5408 PF17402.2 NODE_42819_length_472_cov_2.162471_g35181_i0reverse_frame_2 - 0.11 12.4 2.0 3.9 7.4 0.9 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5408) Ribosomal_L31 PF01197.18 NODE_42819_length_472_cov_2.162471_g35181_i0forward_frame_2 - 0.061 13.5 0.2 0.11 12.7 0.2 1.4 1 0 0 1 1 1 0 Ribosomal protein L31 Transp_Tc5_C PF04236.15 NODE_42814_length_472_cov_2.688787_g35176_i0forward_frame_2 - 0.0054 17.1 1.3 0.011 16.0 1.3 1.5 1 0 0 1 1 1 1 Tc5 transposase C-terminal domain DUF4848 PF16140.5 NODE_42800_length_472_cov_61.368421_g35162_i0forward_frame_3 - 0.033 13.7 0.2 0.047 13.2 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4848) S_4TM PF18159.1 NODE_42799_length_472_cov_67.320366_g35161_i0forward_frame_3 - 0.076 12.3 3.4 0.11 11.8 3.4 1.2 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF4131 PF13567.6 NODE_42799_length_472_cov_67.320366_g35161_i0forward_frame_3 - 1.8 8.2 5.8 3 7.5 5.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2207 PF09972.9 NODE_42799_length_472_cov_67.320366_g35161_i0forward_frame_3 - 9.5 4.9 6.1 13 4.4 6.1 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Glyco_hydro_4 PF02056.16 NODE_42791_length_472_cov_79.194508_g35153_i0reverse_frame_2 - 0.35 10.4 5.3 0.16 11.5 0.4 2.1 2 0 0 2 2 2 0 Family 4 glycosyl hydrolase LptF_LptG PF03739.14 NODE_42791_length_472_cov_79.194508_g35153_i0reverse_frame_2 - 1.1 8.0 3.1 1.2 7.9 3.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG zf-CRD PF17979.1 NODE_42791_length_472_cov_79.194508_g35153_i0reverse_frame_2 - 1.2 9.2 6.4 11 6.0 5.9 2.3 1 1 0 1 1 1 0 Cysteine rich domain with multizinc binding regions Inhibitor_I69 PF13734.6 NODE_42791_length_472_cov_79.194508_g35153_i0reverse_frame_2 - 2 8.9 5.1 0.73 10.3 0.2 2.2 2 0 0 2 2 2 0 Spi protease inhibitor YkyA PF10368.9 NODE_42778_length_472_cov_102.489703_g35141_i0reverse_frame_2 - 0.00067 19.4 1.0 0.00087 19.0 1.0 1.2 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein Cmyb_C PF09316.10 NODE_42778_length_472_cov_102.489703_g35141_i0reverse_frame_2 - 0.0045 16.7 0.4 0.0076 15.9 0.4 1.4 1 0 0 1 1 1 1 C-myb, C-terminal DUF2312 PF10073.9 NODE_42778_length_472_cov_102.489703_g35141_i0reverse_frame_2 - 0.021 14.5 1.6 0.021 14.5 1.6 1.9 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) CPSase_C PF18302.1 NODE_42778_length_472_cov_102.489703_g35141_i0forward_frame_3 - 0.059 13.7 3.9 3.8 8.3 0.1 3.8 2 1 0 2 2 2 0 Carbamoyl phosphate synthetase C-terminal domain DMRT-like PF15791.5 NODE_42773_length_472_cov_123.043478_g35136_i0reverse_frame_3 - 0.063 13.7 0.4 0.1 13.0 0.4 1.4 1 0 0 1 1 1 0 Doublesex-and mab-3-related transcription factor C1 and C2 Herpes_BLLF1 PF05109.13 NODE_42761_length_472_cov_260.137300_g35124_i0reverse_frame_3 - 0.012 13.6 72.9 0.015 13.3 38.5 2.0 1 1 1 2 2 2 0 Herpes virus major outer envelope glycoprotein (BLLF1) CLZ PF16526.5 NODE_42761_length_472_cov_260.137300_g35124_i0forward_frame_2 - 0.66 10.4 5.3 5.4 7.5 1.3 2.3 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels FlxA PF14282.6 NODE_42761_length_472_cov_260.137300_g35124_i0forward_frame_2 - 4.1 7.5 15.9 1.3e+02 2.6 16.0 2.8 1 1 0 1 1 1 0 FlxA-like protein DUF1375 PF07119.12 NODE_42755_length_472_cov_390.629291_g35119_i0reverse_frame_2 - 0.0031 17.9 5.3 3 8.3 0.1 3.2 2 1 1 3 3 3 3 Protein of unknown function (DUF1375) MyTH4 PF00784.17 NODE_42755_length_472_cov_390.629291_g35119_i0forward_frame_3 - 0.27 11.7 5.2 4.6 7.8 0.2 3.1 2 1 1 3 3 3 0 MyTH4 domain Exonuc_V_gamma PF04257.14 NODE_42755_length_472_cov_390.629291_g35119_i0forward_frame_2 - 0.11 10.7 0.1 0.39 8.9 0.0 1.7 1 1 1 2 2 2 0 Exodeoxyribonuclease V, gamma subunit Kinesin PF00225.23 NODE_42739_length_473_cov_2.755708_g35107_i0forward_frame_3 - 1.9e-33 115.8 0.0 2.6e-33 115.4 0.0 1.2 1 0 0 1 1 1 1 Kinesin motor domain CorA PF01544.18 NODE_42739_length_473_cov_2.755708_g35107_i0forward_frame_3 - 0.096 12.0 0.0 0.096 12.0 0.0 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein NAD_binding_4 PF07993.12 NODE_42738_length_473_cov_3.513699_g35106_i0reverse_frame_2 - 0.17 11.1 0.2 0.23 10.6 0.2 1.1 1 0 0 1 1 1 0 Male sterility protein Glycogen_syn PF05693.13 NODE_42738_length_473_cov_3.513699_g35106_i0forward_frame_2 - 0.016 13.8 0.4 0.018 13.6 0.4 1.1 1 0 0 1 1 1 0 Glycogen synthase CobW_C PF07683.14 NODE_42736_length_473_cov_3.616438_g35104_i0reverse_frame_2 - 2e-06 27.6 0.0 2.8e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain DUF1069 PF06370.11 NODE_42736_length_473_cov_3.616438_g35104_i0forward_frame_2 - 0.16 11.5 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1069) LTP_2 PF14368.6 NODE_42735_length_473_cov_5.180365_g26731_i1reverse_frame_2 - 0.0048 17.0 0.6 0.0073 16.4 0.6 1.3 1 0 0 1 1 1 1 Probable lipid transfer BUD22 PF09073.10 NODE_42732_length_473_cov_42.531963_g35102_i0forward_frame_3 - 2.1 7.6 24.5 2.3 7.5 24.5 1.0 1 0 0 1 1 1 0 BUD22 DUF4733 PF15878.5 NODE_42729_length_473_cov_64.383562_g35099_i0reverse_frame_2 - 0.026 15.0 0.0 0.045 14.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4733) RMMBL PF07521.12 NODE_42728_length_473_cov_67.812785_g35098_i0reverse_frame_3 - 0.05 13.5 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain EIAV_Rev PF11129.8 NODE_42728_length_473_cov_67.812785_g35098_i0reverse_frame_3 - 0.071 13.3 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Rev protein of equine infectious anaemia virus DUF5392 PF17370.2 NODE_42728_length_473_cov_67.812785_g35098_i0reverse_frame_3 - 0.32 11.1 7.5 0.28 11.3 6.4 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5392) DUF4231 PF14015.6 NODE_42728_length_473_cov_67.812785_g35098_i0forward_frame_2 - 0.2 12.2 3.1 0.35 11.4 3.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) YqzE PF14038.6 NODE_42724_length_473_cov_84.668950_g35094_i0forward_frame_2 - 0.0048 16.9 0.5 0.01 15.8 0.1 1.7 1 1 1 2 2 2 1 YqzE-like protein DUF613 PF04764.12 NODE_42716_length_473_cov_119.614155_g35086_i0forward_frame_2 - 0.0028 17.7 2.9 0.0052 16.9 2.9 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF613) Mito_morph_reg PF14972.6 NODE_42710_length_473_cov_159.219178_g35080_i0reverse_frame_3 - 0.064 12.9 0.1 0.094 12.3 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator Phage_holin_2_3 PF16080.5 NODE_42710_length_473_cov_159.219178_g35080_i0reverse_frame_3 - 5.5 6.8 6.7 0.25 11.2 0.8 1.7 2 0 0 2 2 2 0 Bacteriophage holin family HP1 SBP_bac_8 PF13416.6 NODE_42694_length_474_cov_1.774487_g35068_i0forward_frame_2 - 1.3e-08 35.0 0.0 1.7e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein CshA_NR2 PF18651.1 NODE_42693_length_474_cov_1.972665_g35067_i0reverse_frame_2 - 0.18 11.0 0.0 0.23 10.6 0.0 1.1 1 0 0 1 1 1 0 Surface adhesin CshA non-repetitive domain 2 LAMTOR PF15454.6 NODE_42691_length_474_cov_2.054670_g35065_i0forward_frame_3 - 0.051 14.2 0.5 0.083 13.5 0.5 1.3 1 0 0 1 1 1 0 Late endosomal/lysosomal adaptor and MAPK and MTOR activator DUF1854 PF08909.11 NODE_42691_length_474_cov_2.054670_g35065_i0forward_frame_2 - 0.039 13.8 0.1 0.12 12.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1854) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks160.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks160.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks160.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks160.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FtsH_ext PF06480.15 NODE_42672_length_474_cov_82.191344_g35046_i0forward_frame_2 - 0.053 13.9 0.1 0.086 13.2 0.1 1.4 1 0 0 1 1 1 0 FtsH Extracellular Mer2 PF09074.10 NODE_42672_length_474_cov_82.191344_g35046_i0forward_frame_2 - 0.095 12.5 1.7 0.37 10.6 0.1 2.0 2 0 0 2 2 2 0 Mer2 Zea_mays_MuDR PF05928.11 NODE_42672_length_474_cov_82.191344_g35046_i0forward_frame_2 - 0.11 12.2 0.1 0.23 11.1 0.0 1.6 2 0 0 2 2 2 0 Zea mays MURB-like protein (MuDR) CpeS PF09367.10 NODE_42669_length_474_cov_91.867882_g35043_i0forward_frame_3 - 0.014 15.3 0.7 0.15 11.9 0.0 2.1 1 1 1 2 2 2 0 CpeS-like protein TSGP1 PF07771.11 NODE_42669_length_474_cov_91.867882_g35043_i0forward_frame_3 - 0.26 11.4 3.2 7.5 6.7 0.4 2.2 2 1 0 2 2 2 0 Tick salivary peptide group 1 Smr PF01713.21 NODE_42667_length_474_cov_96.207289_g35041_i0reverse_frame_2 - 5.9e-10 39.4 0.0 1.1e-09 38.5 0.0 1.4 1 0 0 1 1 1 1 Smr domain Mak16 PF04874.14 NODE_42667_length_474_cov_96.207289_g35041_i0reverse_frame_2 - 0.07 13.7 0.8 0.1 13.2 0.8 1.2 1 0 0 1 1 1 0 Mak16 protein C-terminal region Tektin PF03148.14 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.00092 18.1 8.5 0.0015 17.4 8.5 1.4 1 1 0 1 1 1 1 Tektin family NPV_P10 PF05531.12 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.0026 18.2 2.1 0.12 12.9 0.2 2.6 3 0 0 3 3 2 1 Nucleopolyhedrovirus P10 protein Fzo_mitofusin PF04799.13 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.0043 16.6 8.1 0.022 14.3 0.9 2.2 1 1 0 2 2 2 1 fzo-like conserved region Tropomyosin_1 PF12718.7 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.0084 16.3 11.1 0.027 14.6 1.7 2.3 2 1 0 2 2 2 1 Tropomyosin like GIT_CC PF16559.5 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.011 15.6 3.4 0.1 12.5 0.2 2.4 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor LPP PF04728.13 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.013 15.9 7.6 0.78 10.2 4.1 3.2 2 1 0 2 2 2 0 Lipoprotein leucine-zipper Nmad5 PF18757.1 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.016 15.5 1.8 0.02 15.1 1.8 1.2 1 0 0 1 1 1 0 Nucleotide modification associated domain 5 WDCP PF15390.6 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.021 13.2 5.8 0.023 13.1 5.8 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Ax_dynein_light PF10211.9 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.027 14.4 8.0 0.052 13.5 2.2 2.2 2 0 0 2 2 2 0 Axonemal dynein light chain Rho_Binding PF08912.11 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.033 15.0 1.3 0.033 15.0 1.3 2.4 2 0 0 2 2 2 0 Rho Binding ABC_tran_CTD PF16326.5 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.058 13.6 9.1 1.9 8.8 0.5 2.6 2 2 0 2 2 2 0 ABC transporter C-terminal domain Lge1 PF11488.8 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.062 13.5 0.6 0.062 13.5 0.6 2.2 2 1 0 2 2 2 0 Transcriptional regulatory protein LGE1 DUF3251 PF11622.8 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.072 12.7 3.1 3 7.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3251) ZapB PF06005.12 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.086 13.3 9.0 0.98 9.9 4.0 2.4 2 0 0 2 2 2 0 Cell division protein ZapB Spc24 PF08286.11 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.09 13.0 6.0 2 8.7 1.6 2.3 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 Prefoldin PF02996.17 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.11 12.4 9.5 0.055 13.4 2.7 3.0 3 1 1 4 4 3 0 Prefoldin subunit Swi5 PF07061.11 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.12 12.5 8.4 0.29 11.3 0.3 2.5 2 1 1 3 3 2 0 Swi5 BLOC1_2 PF10046.9 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.21 11.9 4.6 4.2 7.7 0.2 2.5 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HALZ PF02183.18 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.23 11.7 3.3 1.1 9.6 0.6 2.5 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF4600 PF15372.6 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.24 11.9 7.4 0.8 10.2 6.8 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4600) DUF4795 PF16043.5 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.27 10.8 7.4 0.72 9.4 7.4 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) DegS PF05384.11 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.28 10.7 9.1 1.1 8.7 8.9 2.1 1 1 1 2 2 2 0 Sensor protein DegS DivIC PF04977.15 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.3 10.9 7.9 0.73 9.6 1.5 2.6 2 1 0 2 2 2 0 Septum formation initiator SlyX PF04102.12 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.3 11.7 5.0 3.6 8.3 0.8 2.6 2 0 0 2 2 2 0 SlyX FliD_C PF07195.12 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.33 10.3 8.2 0.72 9.2 8.2 1.6 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus Nas2_N PF18265.1 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.46 10.4 5.2 0.38 10.7 0.7 2.5 2 1 1 3 3 3 0 Nas2 N_terminal domain GTA_holin_3TM PF11351.8 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.47 11.0 1.9 0.52 10.9 0.5 1.6 2 0 0 2 2 2 0 Holin of 3TMs, for gene-transfer release Prefoldin_2 PF01920.20 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.52 10.3 10.0 0.082 12.9 3.3 2.3 2 0 0 2 2 2 0 Prefoldin subunit ACCA PF03255.14 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.55 10.1 6.4 0.99 9.3 0.4 2.2 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF4407 PF14362.6 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 0.55 9.5 9.9 0.2 11.0 3.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Sas10_Utp3 PF04000.15 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 1.1 10.0 5.7 3.9 8.2 0.6 2.4 2 0 0 2 2 2 0 Sas10/Utp3/C1D family Allexi_40kDa PF05549.11 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 1.2 8.6 8.1 4.7 6.6 1.1 2.0 1 1 1 2 2 2 0 Allexivirus 40kDa protein Syntaxin-6_N PF09177.11 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 1.4 9.5 7.9 11 6.7 7.1 2.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DLP_helical PF18709.1 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 1.7 7.8 7.1 0.4 9.8 2.8 1.9 1 1 1 2 2 2 0 Dynamin-like helical domain Plk4_PB2 PF18409.1 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 1.7 9.4 4.5 2.5 8.8 1.1 2.1 1 1 1 2 2 2 0 Polo-like Kinase 4 Polo Box 2 YlqD PF11068.8 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 2.2 8.7 8.8 3.4 8.1 1.2 2.1 2 0 0 2 2 2 0 YlqD protein TMF_DNA_bd PF12329.8 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 2.3 8.3 14.5 0.41 10.7 3.7 2.4 3 0 0 3 3 2 0 TATA element modulatory factor 1 DNA binding MRNIP PF15749.5 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 2.6 8.8 6.8 15 6.4 0.6 2.5 1 1 1 2 2 2 0 MRN-interacting protein BBS2_C PF14782.6 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 3.8 6.2 8.2 0.57 8.9 3.5 1.8 1 1 0 2 2 2 0 Ciliary BBSome complex subunit 2, C-terminal DUF4446 PF14584.6 NODE_42664_length_474_cov_98.542141_g35038_i0forward_frame_3 - 5.1 7.1 6.6 3.4 7.6 1.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Rpr2 PF04032.16 NODE_42663_length_474_cov_100.375854_g1795_i1reverse_frame_3 - 0.0067 16.7 2.6 0.012 15.9 2.6 1.4 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain SRTM1 PF15872.5 NODE_42663_length_474_cov_100.375854_g1795_i1forward_frame_2 - 0.025 14.7 3.1 0.049 13.8 3.1 1.5 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 C5HCH PF17982.1 NODE_42663_length_474_cov_100.375854_g1795_i1forward_frame_2 - 0.43 10.8 2.4 0.74 10.0 2.4 1.3 1 0 0 1 1 1 0 NSD Cys-His rich domain P34-Arc PF04045.14 NODE_42649_length_474_cov_193.056948_g35024_i0reverse_frame_2 - 0.26 10.9 1.6 0.4 10.4 1.6 1.2 1 0 0 1 1 1 0 Arp2/3 complex, 34 kD subunit p34-Arc PARP PF00644.20 NODE_42649_length_474_cov_193.056948_g35024_i0forward_frame_3 - 0.0033 17.1 0.0 0.0039 16.8 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain SBP_bac_1 PF01547.25 ORF98669 - 1.2e-08 35.3 1.7 1.8e-08 34.7 1.7 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 ORF98669 - 1.6e-07 31.3 0.6 1.6e-07 31.3 0.6 1.3 2 0 0 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 ORF98669 - 1e-05 25.1 0.5 1.5e-05 24.6 0.5 1.3 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein YabA PF06156.13 ORF97753 - 0.0043 17.7 6.4 0.0055 17.3 0.4 2.2 1 1 1 2 2 2 1 Initiation control protein YabA Streptin-Immun PF11083.8 ORF97753 - 0.011 16.1 6.0 0.22 12.0 1.7 2.3 2 0 0 2 2 2 0 Lantibiotic streptin immunity protein TssO PF17561.2 ORF97753 - 0.14 12.3 8.0 0.1 12.7 6.5 1.5 1 1 0 1 1 1 0 Type VI secretion system, TssO NPV_P10 PF05531.12 ORF97753 - 0.31 11.5 3.6 0.46 11.0 0.4 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF2228 PF10228.9 ORF97753 - 1 9.0 7.5 0.35 10.6 1.5 2.1 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2228) DUF4200 PF13863.6 ORF97753 - 3.2 8.2 16.4 0.53 10.7 12.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) SAS4 PF15460.6 ORF97753 - 8 6.6 11.1 24 5.1 5.7 2.1 1 1 1 2 2 2 0 Something about silencing, SAS, complex subunit 4 Nup153 PF08604.10 ORF97072 - 0.38 9.5 1.1 0.46 9.2 1.1 1.1 1 0 0 1 1 1 0 Nucleoporin Nup153-like CPP1-like PF11833.8 ORF95966 - 0.0081 15.8 0.2 0.012 15.2 0.2 1.4 1 1 0 1 1 1 1 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Pex14_N PF04695.13 ORF95966 - 0.035 14.8 0.5 0.34 11.5 0.1 2.1 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3806 PF12713.7 ORF95966 - 0.12 12.2 0.0 0.37 10.6 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3806) TssO PF17561.2 ORF95966 - 0.12 12.5 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO PBP1_TM PF14812.6 ORF94203 - 0.049 14.0 0.3 0.085 13.2 0.3 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Gemini_mov PF01708.16 ORF9389 - 0.048 13.4 0.2 0.084 12.7 0.2 1.4 1 0 0 1 1 1 0 Geminivirus putative movement protein Tweety PF04906.13 ORF91147 - 0.00032 19.5 0.1 0.026 13.2 0.0 2.0 2 0 0 2 2 2 2 Tweety EphA2_TM PF14575.6 ORF91147 - 0.0025 18.6 0.0 0.057 14.3 0.0 2.1 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain ETRAMP PF09716.10 ORF91147 - 0.0049 16.9 1.3 0.023 14.8 1.3 2.0 1 1 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Glycophorin_A PF01102.18 ORF91147 - 0.013 15.8 3.5 0.019 15.2 0.6 2.4 1 1 1 2 2 2 0 Glycophorin A TMEM154 PF15102.6 ORF91147 - 0.015 15.2 1.3 1.2 9.1 0.1 2.4 1 1 2 3 3 3 0 TMEM154 protein family Orf78 PF06024.12 ORF91147 - 0.019 15.3 0.0 0.055 13.8 0.0 1.8 1 1 2 3 3 3 0 Orf78 (ac78) CD34_antigen PF06365.12 ORF91147 - 0.021 14.4 2.7 0.062 12.9 0.1 2.0 1 1 0 2 2 2 0 CD34/Podocalyxin family FAM104 PF15434.6 ORF91147 - 0.046 14.3 2.7 0.16 12.5 0.3 2.0 2 0 0 2 2 2 0 Family 104 UPF0370 PF13980.6 ORF91147 - 0.16 12.0 0.2 0.16 12.0 0.2 1.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0370) DUF2706 PF10913.8 ORF91147 - 8.6 6.3 7.0 1 9.2 2.7 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2706) Nup153 PF08604.10 ORF88283 - 0.38 9.5 1.1 0.46 9.2 1.1 1.1 1 0 0 1 1 1 0 Nucleoporin Nup153-like TRP PF06011.12 ORF87983 - 4e-09 35.7 4.4 5.3e-09 35.3 4.4 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Glucos_trans_II PF14264.6 ORF87983 - 0.01 15.2 2.6 0.014 14.8 2.6 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII Shisa PF13908.6 ORF87983 - 0.058 13.6 3.6 0.074 13.3 0.3 1.9 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator MLANA PF14991.6 ORF87983 - 0.065 13.5 0.2 0.11 12.8 0.2 1.3 1 0 0 1 1 1 0 Protein melan-A DUF2663 PF10864.8 ORF87983 - 0.079 13.4 1.6 0.13 12.7 0.6 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2663) Bap31 PF05529.12 ORF87983 - 0.39 10.6 5.1 0.15 12.0 1.5 1.8 1 1 1 2 2 2 0 Bap31/Bap29 transmembrane region adh_short PF00106.25 ORF8360 - 0.16 11.4 0.2 0.21 11.0 0.2 1.1 1 0 0 1 1 1 0 short chain dehydrogenase Cyclin PF08613.11 ORF83296 - 7.7e-07 29.6 0.4 9.5e-07 29.3 0.4 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF83296 - 2.5e-06 27.2 0.1 3.5e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain GyrI-like PF06445.15 ORF82405 - 1.7e-29 103.1 0.2 1.9e-29 103.0 0.2 1.0 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 ORF82405 - 2.8e-26 92.5 0.1 3.1e-26 92.3 0.1 1.0 1 0 0 1 1 1 1 Integron-associated effector binding protein zf-LITAF-like PF10601.9 ORF81889 - 2e-09 37.6 28.0 2.9e-09 37.1 28.0 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Cyt_bd_oxida_II PF02322.15 ORF78867 - 8.1e-24 84.5 13.0 9e-24 84.4 13.0 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II DUF2649 PF10854.8 ORF78867 - 0.5 10.7 4.7 1.3 9.4 4.7 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2649) DUF2417 PF10329.9 ORF7793 - 2.3 7.6 6.0 0.29 10.5 2.4 1.4 2 0 0 2 2 2 0 Region of unknown function (DUF2417) SnoaL_3 PF13474.6 ORF76162 - 0.14 12.4 1.7 5.9 7.2 0.0 3.3 1 1 3 4 4 4 0 SnoaL-like domain zf-CRD PF17979.1 ORF76010 - 0.048 13.8 3.8 0.065 13.3 3.8 1.2 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions IBR PF01485.21 ORF75179 - 4.3e-12 46.1 7.6 4.3e-12 46.1 7.6 3.3 2 2 2 4 4 4 1 IBR domain, a half RING-finger domain zf-RING_UBOX PF13445.6 ORF75179 - 0.00034 20.6 0.6 0.00034 20.6 0.6 3.0 2 1 0 2 2 2 1 RING-type zinc-finger zf-RING_2 PF13639.6 ORF75179 - 0.0028 17.9 0.4 0.0028 17.9 0.4 3.9 2 1 1 3 3 3 1 Ring finger domain zf-RING_5 PF14634.6 ORF75179 - 0.0072 16.3 2.0 0.0072 16.3 2.0 3.4 2 1 0 2 2 2 1 zinc-RING finger domain TERF2_RBM PF16772.5 ORF75179 - 0.032 13.7 0.1 0.085 12.3 0.0 1.7 2 0 0 2 2 2 0 Telomeric repeat-binding factor 2 Rap1-binding motif zf-RING_11 PF17123.5 ORF75179 - 0.11 12.3 5.3 0.2 11.4 0.9 2.7 2 0 0 2 2 2 0 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF75179 - 0.14 12.1 19.0 0.16 11.8 0.4 3.8 3 1 1 4 4 4 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF75179 - 0.28 11.4 0.1 0.28 11.4 0.1 3.4 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING Rieske PF00355.26 ORF75179 - 0.39 10.7 6.4 1.9 8.5 6.4 2.1 1 1 0 1 1 1 0 Rieske [2Fe-2S] domain zf-C3HC4 PF00097.25 ORF75179 - 0.99 9.3 22.6 0.15 12.0 1.7 3.8 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Prominin PF05478.11 ORF72481 - 0.031 12.3 5.8 0.051 11.5 5.2 1.5 1 1 1 2 2 2 0 Prominin DUF948 PF06103.11 ORF72481 - 0.081 13.2 2.7 0.86 9.9 0.1 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DivIC PF04977.15 ORF72481 - 0.14 11.9 7.8 0.18 11.6 2.3 2.4 2 0 0 2 2 2 0 Septum formation initiator APG6_N PF17675.1 ORF72481 - 0.23 12.0 9.5 0.43 11.1 9.5 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region UPF0242 PF06785.11 ORF72481 - 0.38 10.8 9.6 0.64 10.1 9.1 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Snapin_Pallidin PF14712.6 ORF72481 - 0.8 10.2 10.5 0.3 11.5 3.5 2.5 2 1 0 2 2 2 0 Snapin/Pallidin CENP-H PF05837.12 ORF72481 - 1 9.8 9.4 0.18 12.2 2.6 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) ALMT PF11744.8 ORF72481 - 1.8 7.3 5.2 2.9 6.6 5.2 1.3 1 1 0 1 1 1 0 Aluminium activated malate transporter TRAF_BIRC3_bd PF16673.5 ORF72481 - 2.5 7.9 7.8 8.3 6.3 0.3 2.4 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF848 PF05852.11 ORF72481 - 5.2 7.2 9.0 1.7 8.8 3.4 2.4 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) Peptidase_S74 PF13884.6 ORF72193 - 3.6e-08 33.6 0.1 8.1e-08 32.5 0.1 1.6 1 0 0 1 1 1 1 Chaperone of endosialidase CCDC158 PF15921.5 ORF72193 - 0.007 14.3 0.2 0.0087 14.0 0.2 1.0 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 158 DNA_alkylation PF08713.11 ORF72193 - 0.066 12.9 3.7 1.1 8.9 0.9 2.0 1 1 1 2 2 2 0 DNA alkylation repair enzyme Aldo_ket_red PF00248.21 ORF72136 - 2.3e-21 76.3 1.1 6.2e-19 68.3 1.1 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Sacchrp_dh_NADP PF03435.18 ORF72136 - 0.024 14.9 0.3 6.7 7.0 0.0 2.2 1 1 1 2 2 2 0 Saccharopine dehydrogenase NADP binding domain DUF1510 PF07423.11 ORF72136 - 0.049 13.8 0.1 0.1 12.8 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1510) EF-hand_6 PF13405.6 ORF70920 - 2.3e-08 33.3 0.1 0.00028 20.6 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF70920 - 9.4e-08 31.1 1.0 0.0011 18.4 0.1 3.2 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF70920 - 7.9e-05 23.0 1.6 0.0021 18.5 0.5 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF70920 - 9e-05 22.2 0.1 0.11 12.4 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain pair DUF4860 PF16152.5 ORF70920 - 0.064 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4860) EF-hand_5 PF13202.6 ORF70920 - 0.13 11.8 0.1 1.4 8.6 0.0 2.2 2 0 0 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF70920 - 0.22 11.5 1.2 19 5.3 0.1 2.2 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand ART PF01129.18 ORF6986 - 1.2e-05 24.7 0.0 1.5e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 ORF6986 - 0.0057 16.0 0.0 0.0065 15.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosyltransferase exoenzyme FlaF PF07309.11 ORF68870 - 0.049 13.6 0.1 0.075 13.0 0.1 1.2 1 0 0 1 1 1 0 Flagellar protein FlaF DUF2457 PF10446.9 ORF66914 - 1.7 7.7 5.8 2.4 7.2 5.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) WD40 PF00400.32 ORF66453 - 2.1e-15 56.8 8.6 1.1e-05 26.0 0.2 3.2 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF66453 - 4.6e-05 23.6 1.3 0.025 14.9 0.2 2.5 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain DUF3748 PF12566.8 ORF66453 - 0.035 14.0 0.1 0.11 12.5 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3748) Nucleoporin_N PF08801.11 ORF66453 - 0.037 12.8 1.1 0.77 8.4 0.1 2.3 2 1 1 3 3 3 0 Nup133 N terminal like Nup160 PF11715.8 ORF66453 - 0.064 11.9 0.1 0.098 11.3 0.1 1.3 1 1 0 1 1 1 0 Nucleoporin Nup120/160 Prominin PF05478.11 ORF65973 - 0.031 12.3 5.8 0.051 11.5 5.2 1.5 1 1 1 2 2 2 0 Prominin DUF948 PF06103.11 ORF65973 - 0.081 13.2 2.7 0.86 9.9 0.1 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DivIC PF04977.15 ORF65973 - 0.14 11.9 7.8 0.18 11.6 2.3 2.4 2 0 0 2 2 2 0 Septum formation initiator APG6_N PF17675.1 ORF65973 - 0.23 12.0 9.5 0.43 11.1 9.5 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region UPF0242 PF06785.11 ORF65973 - 0.38 10.8 9.6 0.64 10.1 9.1 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Snapin_Pallidin PF14712.6 ORF65973 - 0.8 10.2 10.5 0.3 11.5 3.5 2.5 2 1 0 2 2 2 0 Snapin/Pallidin CENP-H PF05837.12 ORF65973 - 1 9.8 9.4 0.18 12.2 2.6 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) ALMT PF11744.8 ORF65973 - 1.8 7.3 5.2 2.9 6.6 5.2 1.3 1 1 0 1 1 1 0 Aluminium activated malate transporter TRAF_BIRC3_bd PF16673.5 ORF65973 - 2.5 7.9 7.8 8.3 6.3 0.3 2.4 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF848 PF05852.11 ORF65973 - 5.2 7.2 9.0 1.7 8.8 3.4 2.4 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) Ras PF00071.22 ORF62400 - 9e-18 64.4 0.7 9e-18 64.4 0.7 1.5 2 0 0 2 2 2 1 Ras family Arf PF00025.21 ORF62400 - 4.9e-05 22.9 0.2 4.9e-05 22.9 0.2 1.9 2 0 0 2 2 2 1 ADP-ribosylation factor family Roc PF08477.13 ORF62400 - 0.00024 21.3 3.3 0.00036 20.7 0.1 2.5 2 1 1 3 3 3 1 Ras of Complex, Roc, domain of DAPkinase Kin17_mid PF10357.9 ORF62400 - 0.02 14.8 4.4 0.028 14.3 4.4 1.2 1 0 0 1 1 1 0 Domain of Kin17 curved DNA-binding protein DUF2555 PF10742.9 ORF62400 - 0.083 12.7 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2555) Glutaredoxin PF00462.24 ORF59410 - 5.8e-14 52.1 0.0 8.6e-14 51.5 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin DcuC PF03606.15 ORF57246 - 1.4e-46 159.0 24.8 1.5e-46 158.8 24.8 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier CPP1-like PF11833.8 ORF54735 - 0.0081 15.8 0.2 0.012 15.2 0.2 1.4 1 1 0 1 1 1 1 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Pex14_N PF04695.13 ORF54735 - 0.035 14.8 0.5 0.34 11.5 0.1 2.1 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3806 PF12713.7 ORF54735 - 0.12 12.2 0.0 0.37 10.6 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3806) TssO PF17561.2 ORF54735 - 0.12 12.5 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO Phage_holin_2_4 PF16082.5 ORF54641 - 0.95 9.2 3.3 0.25 11.1 0.3 1.6 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like CD52 PF15116.6 ORF5457 - 2.3 8.3 13.4 16 5.7 13.4 2.5 1 1 0 1 1 1 0 CAMPATH-1 antigen Pkinase PF00069.25 ORF53765 - 5.8e-46 157.0 0.0 6.5e-46 156.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF53765 - 8.3e-31 107.2 0.0 9.7e-31 107.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF53765 - 1.9e-05 24.1 0.0 2.5e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF53765 - 0.0003 19.7 0.0 0.00036 19.4 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Peptidase_C65 PF10275.9 ORF52606 - 0.013 15.0 1.8 0.016 14.7 1.8 1.2 1 0 0 1 1 1 0 Peptidase C65 Otubain tRNA_lig_kinase PF08303.11 ORF51302 - 0.021 14.9 3.1 0.027 14.6 3.1 1.3 1 0 0 1 1 1 0 tRNA ligase kinase domain AcylCoA_dehyd_C PF12186.8 ORF51302 - 0.61 10.2 7.3 2.6 8.2 0.6 2.3 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase C terminal Spc24 PF08286.11 ORF50439 - 0.053 13.8 0.4 0.066 13.5 0.4 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 IKKbetaNEMObind PF12179.8 ORF50439 - 0.077 13.0 5.4 0.42 10.7 1.8 2.6 1 1 1 2 2 2 0 I-kappa-kinase-beta NEMO binding domain Peptidase_C37 PF05416.12 ORF49699 - 0.018 13.6 0.3 0.021 13.4 0.3 1.1 1 0 0 1 1 1 0 Southampton virus-type processing peptidase LPP PF04728.13 ORF49699 - 0.024 15.0 0.8 0.044 14.2 0.8 1.5 1 0 0 1 1 1 0 Lipoprotein leucine-zipper TMF_TATA_bd PF12325.8 ORF49699 - 0.14 12.4 3.2 0.36 11.0 0.6 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DASH_Dad4 PF08650.10 ORF49699 - 0.33 11.0 4.7 4.6 7.3 0.2 2.3 2 0 0 2 2 2 0 DASH complex subunit Dad4 Shugoshin_N PF07558.11 ORF49699 - 0.67 9.9 7.9 0.34 10.8 4.4 2.4 2 1 0 2 2 2 0 Shugoshin N-terminal coiled-coil region Organ_specific PF10950.8 ORF4951 - 0.1 13.3 1.6 0.17 12.6 1.5 1.4 1 1 0 1 1 1 0 Organ specific protein ERAP1_C PF11838.8 ORF49364 - 0.00048 19.8 0.1 0.00054 19.6 0.1 1.0 1 0 0 1 1 1 1 ERAP1-like C-terminal domain THEG PF14912.6 ORF49099 - 0.15 12.5 0.8 0.46 11.0 0.1 2.0 2 0 0 2 2 2 0 Testicular haploid expressed repeat Cas9_PI2 PF18070.1 ORF49099 - 0.18 12.6 1.5 2 9.2 0.9 2.5 1 1 1 2 2 2 0 CRISPR-Cas9 PI domain XPA_C PF05181.12 ORF49076 - 0.031 14.2 1.0 0.27 11.2 0.3 2.5 1 1 1 2 2 2 0 XPA protein C-terminus Carla_C4 PF01623.17 ORF42483 - 6.6 6.8 8.4 0.62 10.1 0.5 2.4 2 0 0 2 2 2 0 Carlavirus putative nucleic acid binding protein Prominin PF05478.11 ORF41604 - 0.031 12.3 5.8 0.051 11.5 5.2 1.5 1 1 1 2 2 2 0 Prominin DUF948 PF06103.11 ORF41604 - 0.081 13.2 2.7 0.86 9.9 0.1 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DivIC PF04977.15 ORF41604 - 0.14 11.9 7.8 0.18 11.6 2.3 2.4 2 0 0 2 2 2 0 Septum formation initiator APG6_N PF17675.1 ORF41604 - 0.23 12.0 9.5 0.43 11.1 9.5 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region UPF0242 PF06785.11 ORF41604 - 0.38 10.8 9.6 0.64 10.1 9.1 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Snapin_Pallidin PF14712.6 ORF41604 - 0.8 10.2 10.5 0.3 11.5 3.5 2.5 2 1 0 2 2 2 0 Snapin/Pallidin CENP-H PF05837.12 ORF41604 - 1 9.8 9.4 0.18 12.2 2.6 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) ALMT PF11744.8 ORF41604 - 1.8 7.3 5.2 2.9 6.6 5.2 1.3 1 1 0 1 1 1 0 Aluminium activated malate transporter TRAF_BIRC3_bd PF16673.5 ORF41604 - 2.5 7.9 7.8 8.3 6.3 0.3 2.4 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF848 PF05852.11 ORF41604 - 5.2 7.2 9.0 1.7 8.8 3.4 2.4 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) RBP_receptor PF14752.6 ORF40788 - 0.00019 20.2 1.0 0.00023 19.9 1.0 1.1 1 0 0 1 1 1 1 Retinol binding protein receptor BSP_II PF05432.11 ORF40788 - 0.047 13.4 0.2 0.058 13.1 0.2 1.1 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) DUF5536 PF17688.1 ORF39564 - 0.032 14.1 2.0 0.04 13.8 2.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5536) Chorion_2 PF03964.15 ORF39564 - 7 7.5 7.9 12 6.8 7.9 1.4 1 0 0 1 1 1 0 Chorion family 2 YqgB PF11036.8 ORF39072 - 0.12 12.1 0.0 0.25 11.1 0.0 1.5 1 0 0 1 1 1 0 Virulence promoting factor ERGIC_N PF13850.6 ORF37940 - 0.022 15.1 0.6 0.037 14.4 0.6 1.6 1 1 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4653 PF15546.6 ORF37940 - 0.17 11.5 0.1 0.22 11.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4653) Proteasom_Rpn13 PF04683.13 ORF37572 - 0.00079 19.9 2.8 6.8 7.3 0.0 4.3 1 1 4 5 5 5 3 Proteasome complex subunit Rpn13 ubiquitin receptor GGDEF PF00990.21 ORF33293 - 1.3e-07 31.5 0.0 1.5e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain SYS1 PF09801.9 ORF33120 - 1.4e-21 77.2 13.1 1.5e-21 77.1 13.1 1.0 1 0 0 1 1 1 1 Integral membrane protein S linking to the trans Golgi network Glucos_trans_II PF14264.6 ORF32919 - 4.5 6.5 7.3 7.9 5.7 7.3 1.3 1 1 0 1 1 1 0 Glucosyl transferase GtrII POM121 PF15229.6 ORF32875 - 7.4 6.2 9.8 10 5.7 9.8 1.3 1 0 0 1 1 1 0 POM121 family WW PF00397.26 ORF32186 - 3.9e-06 26.8 0.6 6e-06 26.2 0.0 1.6 2 0 0 2 2 2 1 WW domain Peptidase_M76 PF09768.9 ORF29699 - 0.044 13.6 0.5 0.063 13.1 0.5 1.2 1 0 0 1 1 1 0 Peptidase M76 family DUF4457 PF14652.6 ORF29594 - 8.6e-19 67.9 0.9 9.2e-19 67.9 0.1 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4457) Pkinase PF00069.25 ORF28646 - 7.3e-13 48.5 0.0 9.9e-13 48.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF28646 - 3.6e-07 29.7 0.0 6.7e-07 28.9 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase DUF4494 PF14902.6 ORF28228 - 0.0028 17.5 0.8 0.004 17.0 0.8 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4494) SPATIAL PF15256.6 ORF28228 - 0.022 15.1 0.9 0.029 14.7 0.9 1.1 1 0 0 1 1 1 0 SPATIAL SQHop_cyclase_C PF13243.6 ORF28228 - 0.047 12.8 0.0 0.058 12.5 0.0 1.1 1 0 0 1 1 1 0 Squalene-hopene cyclase C-terminal domain AMP-binding_C PF13193.6 ORF28003 - 4.1e-19 69.3 1.0 4.9e-19 69.1 0.3 1.5 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF28003 - 3e-16 59.0 0.1 4.4e-16 58.5 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 ORF28003 - 0.0084 16.4 0.1 0.012 15.9 0.1 1.5 1 1 0 1 1 1 1 AMP-binding enzyme C-terminal domain NUC202 PF08166.12 ORF27278 - 0.062 13.4 1.1 7.6 6.7 0.4 2.5 2 1 0 2 2 2 0 NUC202 domain DUF5422 PF17459.2 ORF26842 - 0.48 10.6 6.4 0.21 11.8 2.8 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5422) SSP160 PF06933.11 ORF26842 - 0.85 7.8 15.0 0.99 7.5 15.0 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 LMBR1 PF04791.16 ORF24986 - 0.1 11.5 4.9 0.097 11.6 4.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein EMC3_TMCO1 PF01956.16 ORF24986 - 2.6 7.7 7.9 3.5 7.3 7.9 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like BRF1 PF07741.13 ORF24986 - 4.3 7.7 19.0 79 3.7 0.0 2.2 2 0 0 2 2 2 0 Brf1-like TBP-binding domain Bac_export_2 PF01312.19 ORF24364 - 0.05 12.8 1.4 0.054 12.7 1.4 1.1 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family EbsA PF17255.2 ORF24364 - 0.053 13.9 3.1 0.072 13.4 2.5 1.6 1 1 0 1 1 1 0 EbsA-like protein Pkinase PF00069.25 ORF23850 - 2.9e-48 164.5 0.1 3.2e-48 164.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF23850 - 2.1e-27 96.0 0.0 2.4e-27 95.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF23850 - 5.8e-07 28.6 0.0 7.7e-07 28.2 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF23850 - 6.4e-06 26.3 0.0 1.4e-05 25.1 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF23850 - 8.8e-06 24.9 0.1 1e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF23850 - 0.00018 20.9 0.1 0.00025 20.5 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF23850 - 0.0015 17.9 0.0 0.0024 17.3 0.0 1.3 1 1 0 1 1 1 1 Kinase-like RIO1 PF01163.22 ORF23850 - 0.0054 16.3 0.0 0.016 14.8 0.1 1.7 1 1 1 2 2 2 1 RIO1 family Seadorna_VP7 PF07387.11 ORF23850 - 0.012 14.7 0.0 0.016 14.3 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 AP_endonuc_2 PF01261.24 ORF23687 - 4.6e-05 23.0 0.0 8.1e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Peptidase_M41 PF01434.18 ORF22827 - 9.5e-19 68.0 0.6 9.5e-19 68.0 0.6 1.5 2 0 0 2 2 2 1 Peptidase family M41 SPATIAL PF15256.6 ORF22827 - 0.14 12.4 0.3 0.14 12.4 0.3 2.0 1 1 1 2 2 2 0 SPATIAL VEGF_C PF14554.6 ORF228 - 0.033 14.3 1.4 0.033 14.3 1.4 2.0 2 0 0 2 2 2 0 VEGF heparin-binding domain DUF3671 PF12420.8 ORF20208 - 0.0002 21.4 0.1 0.0015 18.6 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function DUF2207 PF09972.9 ORF20208 - 0.0011 17.9 0.0 0.0014 17.5 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Pox_A14 PF05767.12 ORF20208 - 0.0027 17.8 0.4 2.1 8.5 0.1 2.1 2 0 0 2 2 2 2 Poxvirus virion envelope protein A14 TMEM154 PF15102.6 ORF20208 - 0.0057 16.6 0.4 0.0077 16.1 0.1 1.6 1 1 1 2 2 2 1 TMEM154 protein family DUF3899 PF13038.6 ORF20208 - 0.0087 16.5 0.0 0.017 15.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3899) DUF2140 PF09911.9 ORF20208 - 0.011 15.4 0.1 0.018 14.6 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2140) SIT PF15330.6 ORF20208 - 0.018 15.5 0.1 0.1 13.0 0.0 2.0 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT DUF5385 PF17359.2 ORF20208 - 0.018 14.6 0.1 0.028 14.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Tetraspanin PF00335.20 ORF20208 - 0.02 14.6 0.1 0.28 10.9 0.0 2.1 2 0 0 2 2 2 0 Tetraspanin family ATG27 PF09451.10 ORF20208 - 0.025 14.5 0.2 0.038 13.8 0.2 1.3 1 0 0 1 1 1 0 Autophagy-related protein 27 BatD PF13584.6 ORF20208 - 0.026 13.3 0.0 0.034 13.0 0.0 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF5305 PF17231.2 ORF20208 - 0.038 13.4 0.0 0.05 13.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4577 PF15145.6 ORF20208 - 0.055 13.5 0.0 0.084 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Orf78 PF06024.12 ORF20208 - 0.1 12.9 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Orf78 (ac78) EphA2_TM PF14575.6 ORF20208 - 0.16 12.9 0.0 0.85 10.5 0.0 1.9 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF4834 PF16118.5 ORF20208 - 0.18 12.8 1.2 0.3 12.1 0.2 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) DUF2615 PF11027.8 ORF20208 - 0.19 11.9 0.0 0.4 10.8 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) SLATT_5 PF18160.1 ORF20208 - 0.21 10.9 1.9 0.62 9.4 0.6 1.9 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 Wzy_C PF04932.15 ORF20208 - 0.22 11.1 2.9 0.62 9.7 2.8 1.7 2 0 0 2 2 2 0 O-Antigen ligase DUF4330 PF14221.6 ORF20208 - 0.25 11.5 0.1 0.41 10.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) FeoB_associated PF12669.7 ORF20208 - 0.28 11.6 0.6 0.62 10.5 0.6 1.5 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Ribosomal_S17_N PF16205.5 ORF20203 - 0.062 13.7 0.2 0.062 13.7 0.2 2.9 2 1 2 4 4 4 0 Ribosomal_S17 N-terminal TIL PF01826.17 ORF19329 - 1.3 9.3 8.9 8.6 6.7 0.7 2.7 1 1 1 2 2 2 0 Trypsin Inhibitor like cysteine rich domain DUF547 PF04784.14 ORF18677 - 6e-07 29.5 0.0 8.8e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF547 Rep-A_N PF04057.12 ORF18040 - 0.21 11.7 0.0 0.3 11.1 0.0 1.2 1 0 0 1 1 1 0 Replication factor-A protein 1, N-terminal domain Filamin PF00630.19 ORF17566 - 0.00015 22.5 0.2 0.00031 21.5 0.2 1.4 1 0 0 1 1 1 1 Filamin/ABP280 repeat GPI-anchored PF10342.9 ORF17566 - 0.033 14.9 1.6 0.14 12.9 0.4 2.3 1 1 1 2 2 2 0 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family CreA PF05981.12 ORF152934 - 5.2e-58 194.7 0.0 5.9e-58 194.5 0.0 1.0 1 0 0 1 1 1 1 CreA protein Baculo_p26 PF04766.12 ORF14990 - 0.014 14.8 0.1 0.02 14.4 0.1 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus p26 protein G-patch_2 PF12656.7 ORF149428 - 2.3e-13 50.0 1.5 2.3e-13 50.0 1.5 2.3 2 1 0 2 2 2 1 G-patch domain G-patch PF01585.23 ORF149428 - 4.6e-12 45.6 3.5 9e-12 44.7 3.5 1.5 1 0 0 1 1 1 1 G-patch domain Atg14 PF10186.9 ORF149428 - 1.3 8.0 10.6 1.4 7.9 10.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 AgrB PF04647.15 ORF147615 - 0.69 9.2 10.8 0.96 8.7 10.8 1.4 1 1 0 1 1 1 0 Accessory gene regulator B Stc1 PF12898.7 ORF147464 - 0.097 13.2 6.6 19 5.9 4.0 2.9 2 1 1 3 3 3 0 Stc1 domain SBP_bac_5 PF00496.22 ORF142182 - 1.8e-16 60.1 0.1 2.5e-16 59.6 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle MMU163 PF17119.5 ORF139828 - 0.024 13.8 0.8 0.03 13.5 0.8 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis FAINT PF04385.15 ORF139828 - 0.029 14.4 0.2 0.061 13.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function, DUF529 DHC PF09626.10 ORF139828 - 0.035 15.0 0.3 0.063 14.2 0.3 1.4 1 0 0 1 1 1 0 Dihaem cytochrome c SMODS PF18144.1 ORF139828 - 0.22 11.7 3.4 0.36 11.0 3.0 1.5 1 1 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain MatE PF01554.18 ORF138558 - 8.4e-13 48.3 0.3 1.1e-12 48.0 0.3 1.1 1 0 0 1 1 1 1 MatE DUF908 PF06012.12 ORF138558 - 0.046 13.1 1.8 0.059 12.8 1.8 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) CHD5 PF04420.14 ORF138558 - 1.1 9.1 3.6 1.7 8.5 3.6 1.2 1 0 0 1 1 1 0 CHD5-like protein Prominin PF05478.11 ORF136368 - 0.031 12.3 5.8 0.051 11.5 5.2 1.5 1 1 1 2 2 2 0 Prominin DUF948 PF06103.11 ORF136368 - 0.081 13.2 2.7 0.86 9.9 0.1 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DivIC PF04977.15 ORF136368 - 0.14 11.9 7.8 0.18 11.6 2.3 2.4 2 0 0 2 2 2 0 Septum formation initiator APG6_N PF17675.1 ORF136368 - 0.23 12.0 9.5 0.43 11.1 9.5 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region UPF0242 PF06785.11 ORF136368 - 0.38 10.8 9.6 0.64 10.1 9.1 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Snapin_Pallidin PF14712.6 ORF136368 - 0.8 10.2 10.5 0.3 11.5 3.5 2.5 2 1 0 2 2 2 0 Snapin/Pallidin CENP-H PF05837.12 ORF136368 - 1 9.8 9.4 0.18 12.2 2.6 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) ALMT PF11744.8 ORF136368 - 1.8 7.3 5.2 2.9 6.6 5.2 1.3 1 1 0 1 1 1 0 Aluminium activated malate transporter TRAF_BIRC3_bd PF16673.5 ORF136368 - 2.5 7.9 7.8 8.3 6.3 0.3 2.4 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF848 PF05852.11 ORF136368 - 5.2 7.2 9.0 1.7 8.8 3.4 2.4 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) Herpes_BLRF2 PF05812.12 ORF135678 - 0.022 14.9 0.5 0.061 13.4 0.3 1.8 1 1 0 1 1 1 0 Herpesvirus BLRF2 protein Inositol_P PF00459.25 ORF135664 - 4.8e-11 42.7 0.0 5.7e-11 42.5 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family Glyco_hydro_49 PF03718.13 ORF135625 - 1.1e-06 28.6 0.0 1.8e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolase family 49 Methyltransf_31 PF13847.6 ORF135364 - 2.1e-07 30.9 0.0 2.4e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF135364 - 4e-07 29.7 0.1 4.6e-06 26.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase small domain N6_Mtase PF02384.16 ORF135364 - 0.0042 16.4 0.0 0.0049 16.2 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase UPF0020 PF01170.18 ORF135364 - 0.025 14.3 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 SLT_2 PF13406.6 ORF135364 - 0.16 11.1 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Transglycosylase SLT domain Cons_hypoth95 PF03602.15 ORF135364 - 0.2 11.3 0.0 0.36 10.5 0.0 1.3 1 1 0 1 1 1 0 Conserved hypothetical protein 95 DUF2417 PF10329.9 ORF134536 - 2.3 7.6 6.0 0.29 10.5 2.4 1.4 2 0 0 2 2 2 0 Region of unknown function (DUF2417) Pkinase PF00069.25 ORF13182 - 2.9e-48 164.5 0.1 3.2e-48 164.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13182 - 2.1e-27 96.0 0.0 2.4e-27 95.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF13182 - 5.8e-07 28.6 0.0 7.7e-07 28.2 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF13182 - 6.4e-06 26.3 0.0 1.4e-05 25.1 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF13182 - 8.8e-06 24.9 0.1 1e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF13182 - 0.00018 20.9 0.1 0.00025 20.5 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF13182 - 0.0015 17.9 0.0 0.0024 17.3 0.0 1.3 1 1 0 1 1 1 1 Kinase-like RIO1 PF01163.22 ORF13182 - 0.0054 16.3 0.0 0.016 14.8 0.1 1.7 1 1 1 2 2 2 1 RIO1 family Seadorna_VP7 PF07387.11 ORF13182 - 0.012 14.7 0.0 0.016 14.3 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Tropomyosin PF00261.20 ORF131544 - 1.1e-07 31.5 16.8 1.2e-05 24.9 10.0 2.0 1 1 1 2 2 2 2 Tropomyosin Golgin_A5 PF09787.9 ORF131544 - 0.025 14.1 17.0 0.057 12.9 16.6 1.7 1 1 0 1 1 1 0 Golgin subfamily A member 5 DUF3135 PF11333.8 ORF131544 - 0.064 13.5 3.7 0.32 11.3 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3135) DUF1993 PF09351.10 ORF131544 - 0.069 13.3 2.8 0.085 13.0 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) YkyA PF10368.9 ORF131544 - 0.21 11.2 5.5 0.34 10.5 5.5 1.4 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein DUF883 PF05957.13 ORF131544 - 0.24 12.0 11.6 0.37 11.4 4.3 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Prefoldin PF02996.17 ORF131544 - 0.65 9.9 7.7 0.54 10.2 1.0 2.7 3 0 0 3 3 3 0 Prefoldin subunit DUF3584 PF12128.8 ORF131544 - 1.2 6.5 17.2 1.4 6.3 17.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) EMP24_GP25L PF01105.24 ORF131544 - 1.3 9.0 5.6 1.4 8.9 0.5 2.1 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD YabA PF06156.13 ORF131544 - 1.9 9.2 9.7 4 8.1 0.8 2.6 1 1 2 3 3 3 0 Initiation control protein YabA ATP-synt_B PF00430.18 ORF131544 - 2.1 8.5 16.8 0.61 10.2 8.5 2.2 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) Sugarporin_N PF11471.8 ORF131544 - 2.3 8.2 8.7 11 6.1 0.4 2.5 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension SICA_alpha PF12887.7 ORF131544 - 2.6 7.9 6.3 2 8.3 2.5 2.0 1 1 1 2 2 2 0 SICA extracellular alpha domain Exonuc_VII_L PF02601.15 ORF131544 - 4.4 6.8 8.3 5.3 6.5 8.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit PBP1_TM PF14812.6 ORF131211 - 0.049 14.0 0.3 0.085 13.2 0.3 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Kinesin PF00225.23 ORF130165 - 8.5e-34 117.0 2.3 1e-33 116.7 2.3 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF130165 - 8e-23 81.0 1.5 1.1e-20 74.1 1.5 2.1 1 1 0 1 1 1 1 Microtubule binding ResIII PF04851.15 ORF130165 - 0.076 13.0 0.0 0.083 12.9 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AP_endonuc_2 PF01261.24 ORF129346 - 4.6e-05 23.0 0.0 8.1e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF4396 PF14342.6 ORF127091 - 1.1 9.6 5.3 8.8 6.7 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4396) zf-LITAF-like PF10601.9 ORF125606 - 0.18 12.1 11.4 0.11 12.8 9.4 1.8 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain FTZ PF03867.14 ORF125606 - 1 8.8 5.5 0.35 10.4 2.8 1.6 1 1 1 2 2 2 0 Fushi tarazu (FTZ), N-terminal region CAAD PF14159.6 ORF123598 - 0.072 12.9 0.4 0.14 12.0 0.4 1.4 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Ank_2 PF12796.7 ORF12184 - 1.4e-24 86.4 1.1 8.8e-12 45.5 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF12184 - 3e-22 78.7 3.6 4.3e-09 36.7 0.1 2.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF12184 - 1.7e-20 72.8 4.3 7.2e-07 29.4 0.2 4.1 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF12184 - 1.9e-17 61.5 0.5 0.002 18.5 0.0 4.2 4 0 0 4 4 4 4 Ankyrin repeat Ank PF00023.30 ORF12184 - 9.3e-14 51.2 6.7 0.0028 18.0 0.0 4.2 3 1 1 4 4 4 4 Ankyrin repeat RNA_pol_Rpb4 PF03874.16 ORF120151 - 0.00021 21.6 0.8 0.0015 18.8 0.0 2.0 2 0 0 2 2 2 1 RNA polymerase Rpb4 CDC45 PF02724.14 ORF120151 - 4.1 5.6 12.6 4.4 5.5 12.6 1.0 1 0 0 1 1 1 0 CDC45-like protein RHH_1 PF01402.21 ORF117538 - 0.0029 17.5 0.2 0.58 10.2 0.2 2.7 2 0 0 2 2 2 2 Ribbon-helix-helix protein, copG family SH3_15 PF18346.1 ORF115360 - 0.00068 19.9 1.1 0.0011 19.2 1.1 1.3 1 0 0 1 1 1 1 Mind bomb SH3 repeat domain KOW PF00467.29 ORF115360 - 0.074 13.0 3.2 0.13 12.3 0.5 2.3 2 0 0 2 2 2 0 KOW motif DUF1580 PF07618.11 ORF112788 - 9 6.0 7.5 9.1 6.0 0.2 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1580) IL11 PF07400.11 ORF112089 - 0.12 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Interleukin 11 DUF4171 PF13775.6 ORF11182 - 0.011 16.2 1.1 0.017 15.5 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4171) Retrotrans_gag PF03732.17 ORF11182 - 0.11 12.8 4.8 0.069 13.4 2.8 1.8 1 1 0 1 1 1 0 Retrotransposon gag protein DUF16 PF01519.16 ORF11182 - 0.15 12.6 5.6 7.1 7.2 5.6 2.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 KELK PF15796.5 ORF11182 - 0.34 11.4 7.2 0.35 11.3 1.5 2.9 1 1 2 3 3 3 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase SNRNP27 PF08648.12 ORF11182 - 1.5 8.9 8.1 1.1 9.3 2.7 2.3 2 0 0 2 2 2 0 U4/U6.U5 small nuclear ribonucleoproteins DUF3671 PF12420.8 ORF110251 - 0.0002 21.4 0.1 0.0015 18.6 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function DUF2207 PF09972.9 ORF110251 - 0.0011 17.9 0.0 0.0014 17.5 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Pox_A14 PF05767.12 ORF110251 - 0.0027 17.8 0.4 2.1 8.5 0.1 2.1 2 0 0 2 2 2 2 Poxvirus virion envelope protein A14 TMEM154 PF15102.6 ORF110251 - 0.0057 16.6 0.4 0.0077 16.1 0.1 1.6 1 1 1 2 2 2 1 TMEM154 protein family DUF3899 PF13038.6 ORF110251 - 0.0087 16.5 0.0 0.017 15.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3899) DUF2140 PF09911.9 ORF110251 - 0.011 15.4 0.1 0.018 14.6 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2140) SIT PF15330.6 ORF110251 - 0.018 15.5 0.1 0.1 13.0 0.0 2.0 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT DUF5385 PF17359.2 ORF110251 - 0.018 14.6 0.1 0.028 14.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Tetraspanin PF00335.20 ORF110251 - 0.02 14.6 0.1 0.28 10.9 0.0 2.1 2 0 0 2 2 2 0 Tetraspanin family ATG27 PF09451.10 ORF110251 - 0.025 14.5 0.2 0.038 13.8 0.2 1.3 1 0 0 1 1 1 0 Autophagy-related protein 27 BatD PF13584.6 ORF110251 - 0.026 13.3 0.0 0.034 13.0 0.0 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF5305 PF17231.2 ORF110251 - 0.038 13.4 0.0 0.05 13.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4577 PF15145.6 ORF110251 - 0.055 13.5 0.0 0.084 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Orf78 PF06024.12 ORF110251 - 0.1 12.9 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Orf78 (ac78) EphA2_TM PF14575.6 ORF110251 - 0.16 12.9 0.0 0.85 10.5 0.0 1.9 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF4834 PF16118.5 ORF110251 - 0.18 12.8 1.2 0.3 12.1 0.2 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) DUF2615 PF11027.8 ORF110251 - 0.19 11.9 0.0 0.4 10.8 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) SLATT_5 PF18160.1 ORF110251 - 0.21 10.9 1.9 0.62 9.4 0.6 1.9 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 Wzy_C PF04932.15 ORF110251 - 0.22 11.1 2.9 0.62 9.7 2.8 1.7 2 0 0 2 2 2 0 O-Antigen ligase DUF4330 PF14221.6 ORF110251 - 0.25 11.5 0.1 0.41 10.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) FeoB_associated PF12669.7 ORF110251 - 0.28 11.6 0.6 0.62 10.5 0.6 1.5 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein DUF1010 PF06231.11 ORF109988 - 0.064 13.8 0.1 0.14 12.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1010) Asp-B-Hydro_N PF05279.11 ORF109337 - 1 9.4 23.7 1.2 9.1 23.7 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Filamin PF00630.19 ORF107242 - 0.00015 22.5 0.2 0.00031 21.5 0.2 1.4 1 0 0 1 1 1 1 Filamin/ABP280 repeat GPI-anchored PF10342.9 ORF107242 - 0.033 14.9 1.6 0.14 12.9 0.4 2.3 1 1 1 2 2 2 0 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family zf-RanBP PF00641.18 ORF106403 - 0.00067 18.9 1.6 0.00067 18.9 1.6 4.3 3 1 0 3 3 3 1 Zn-finger in Ran binding protein and others Ribosomal_L23eN PF03939.13 ORF101431 - 0.19 12.0 0.4 0.53 10.5 0.2 1.9 1 1 0 1 1 1 0 Ribosomal protein L23, N-terminal domain MNNL PF07657.13 ORF100455 - 2.5 8.2 10.3 0.52 10.4 4.1 2.1 2 0 0 2 2 2 0 N terminus of Notch ligand Ank_2 PF12796.7 ORF100429 - 9.3e-17 61.4 0.1 7.5e-10 39.3 0.1 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF100429 - 3.1e-10 40.1 0.1 4e-09 36.5 0.0 2.2 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF100429 - 1.2e-08 35.4 0.2 1.3e-05 25.6 0.0 2.5 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF100429 - 1.7e-06 28.2 0.0 0.00063 20.1 0.0 2.6 2 1 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF100429 - 4e-06 26.7 0.0 0.0036 17.7 0.0 3.4 3 0 0 3 3 3 1 Ankyrin repeat Baculo_11_kDa PF06143.11 ORF10017 - 9.3e-05 21.9 0.2 0.00017 21.1 0.0 1.6 2 0 0 2 2 2 1 Baculovirus 11 kDa family Neurensin PF14927.6 ORF10017 - 0.022 14.4 0.0 0.034 13.8 0.0 1.3 1 0 0 1 1 1 0 Neurensin DUF2873 PF11395.8 ORF10017 - 0.25 11.2 2.0 0.4 10.6 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2873) Nup35_RRM PF05172.13 NODE_43207_length_466_cov_2.225058_g35542_i0reverse_frame_1 - 0.028 14.4 0.6 7.7 6.5 0.0 2.4 1 1 1 2 2 2 0 Nup53/35/40-type RNA recognition motif HAD_2 PF13419.6 NODE_43184_length_466_cov_71.874710_g35519_i0reverse_frame_1 - 5.2e-08 33.2 0.0 6.4e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 NODE_43184_length_466_cov_71.874710_g35519_i0reverse_frame_1 - 3.8e-07 30.1 0.0 5.2e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 NODE_43184_length_466_cov_71.874710_g35519_i0reverse_frame_1 - 0.02 15.2 0.0 0.027 14.8 0.0 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Ribosomal_L37e PF01907.19 NODE_43184_length_466_cov_71.874710_g35519_i0forward_frame_1 - 0.0088 16.2 2.0 0.026 14.7 2.0 1.7 1 0 0 1 1 1 1 Ribosomal protein L37e ETS_PEA3_N PF04621.13 NODE_43184_length_466_cov_71.874710_g35519_i0forward_frame_1 - 0.076 12.9 2.1 0.084 12.7 2.1 1.1 1 0 0 1 1 1 0 PEA3 subfamily ETS-domain transcription factor N terminal domain DUF515 PF04415.12 NODE_43172_length_466_cov_108.278422_g35507_i0forward_frame_1 - 0.52 8.6 0.8 0.67 8.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) EF-hand_1 PF00036.32 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 1e-07 31.0 11.3 2.4e-05 23.5 0.8 3.2 3 1 1 4 4 4 2 EF hand EF-hand_7 PF13499.6 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 1.1e-06 29.0 11.0 1.3e-06 28.8 9.3 1.9 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 8.5e-05 22.2 11.3 0.037 14.0 1.1 3.4 2 2 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 0.00023 20.5 11.9 0.0017 17.8 0.5 3.3 2 1 1 3 3 3 2 EF hand EF-hand_4 PF12763.7 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 0.057 13.4 0.4 0.057 13.4 0.4 1.7 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 0.067 13.5 5.0 0.54 10.6 1.8 2.4 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 NODE_43166_length_466_cov_157.185615_g35501_i0forward_frame_1 - 0.92 9.4 10.1 2.4 8.1 6.5 2.8 2 1 0 2 2 2 0 EF-hand domain pair DUF4491 PF14898.6 NODE_43146_length_467_cov_1.995370_g35485_i0forward_frame_1 - 0.09 13.2 2.7 0.14 12.6 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) SBP_bac_8 PF13416.6 NODE_43145_length_467_cov_2.016204_g35484_i0forward_frame_1 - 2.4e-14 53.8 0.2 2.9e-14 53.6 0.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 NODE_43145_length_467_cov_2.016204_g35484_i0forward_frame_1 - 5.6e-10 39.7 1.1 6.5e-10 39.4 1.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 NODE_43145_length_467_cov_2.016204_g35484_i0forward_frame_1 - 3.8e-07 29.8 0.1 6.3e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 NODE_43145_length_467_cov_2.016204_g35484_i0forward_frame_1 - 0.029 14.1 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein LINES_C PF14695.6 NODE_43143_length_467_cov_2.391204_g35482_i0reverse_frame_1 - 0.089 12.2 0.1 0.23 10.9 0.1 1.7 1 0 0 1 1 1 0 Lines C-terminus Lep_receptor_Ig PF06328.11 NODE_43138_length_467_cov_3.497685_g35477_i0reverse_frame_1 - 0.0065 16.4 1.3 0.01 15.8 0.2 1.8 2 0 0 2 2 2 1 Ig-like C2-type domain NFACT-R_1 PF05670.13 NODE_43129_length_467_cov_64.780093_g35468_i0reverse_frame_1 - 1.4e-10 41.8 0.0 1.9e-10 41.3 0.0 1.2 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 NODE_43129_length_467_cov_64.780093_g35468_i0reverse_frame_1 - 2.4e-05 24.4 0.0 3.5e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 NFACT protein RNA binding domain IL4Ra_N PF09238.10 NODE_43120_length_467_cov_91.101852_g35460_i0reverse_frame_1 - 0.022 15.1 1.0 2 8.8 0.3 2.5 1 1 1 2 2 2 0 Interleukin-4 receptor alpha chain, N-terminal PRORP PF16953.5 NODE_43118_length_467_cov_94.134259_g35458_i0reverse_frame_1 - 2.6e-05 23.9 0.0 4e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Protein-only RNase P Bcr-Abl_Oligo PF09036.10 NODE_43110_length_467_cov_126.541667_g35450_i0reverse_frame_1 - 0.074 13.1 0.6 2.8 8.0 0.0 2.4 2 1 0 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain GNAT_acetyltr_2 PF13718.6 NODE_43102_length_467_cov_204.256944_g35442_i0forward_frame_1 - 2.6e-07 30.3 0.0 0.005 16.3 0.0 2.1 1 1 1 2 2 2 2 GNAT acetyltransferase 2 Acetyltransf_10 PF13673.7 NODE_43102_length_467_cov_204.256944_g35442_i0forward_frame_1 - 6.8e-07 29.3 0.0 9.6e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_43102_length_467_cov_204.256944_g35442_i0forward_frame_1 - 1.3e-06 28.7 0.0 1.5e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 NODE_43102_length_467_cov_204.256944_g35442_i0forward_frame_1 - 5.2e-06 26.8 0.0 1e-05 25.9 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_43102_length_467_cov_204.256944_g35442_i0forward_frame_1 - 0.0015 18.5 0.0 0.0027 17.6 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein OxoDH_E1alpha_N PF12573.8 NODE_43097_length_467_cov_293.127315_g35437_i0forward_frame_1 - 0.048 13.4 0.1 0.076 12.8 0.1 1.3 1 0 0 1 1 1 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal Cytochrom_C PF00034.21 NODE_43093_length_467_cov_2119.317130_g27999_i4forward_frame_1 - 9.2e-10 39.5 0.1 1.6e-09 38.8 0.1 1.4 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 NODE_43093_length_467_cov_2119.317130_g27999_i4forward_frame_1 - 4.6e-05 23.7 1.1 0.00011 22.4 1.1 1.7 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 NODE_43093_length_467_cov_2119.317130_g27999_i4forward_frame_1 - 0.0014 18.3 0.1 0.0028 17.4 0.0 1.6 2 0 0 2 2 2 1 Cytochrome c-550 domain Cytochrome-c551 PF10643.9 NODE_43093_length_467_cov_2119.317130_g27999_i4forward_frame_1 - 0.12 11.9 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 PSI_PsaE PF02427.17 NODE_43092_length_467_cov_2444.106481_g34665_i3reverse_frame_1 - 5.8e-24 83.5 1.3 7.8e-24 83.1 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE Cas_TM1802 PF09484.10 NODE_43092_length_467_cov_2444.106481_g34665_i3forward_frame_1 - 0.26 10.0 0.1 0.32 9.7 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) DUF63 PF01889.17 NODE_43085_length_468_cov_2.284065_g35427_i0reverse_frame_1 - 0.011 15.9 0.7 0.015 15.5 0.7 1.2 1 0 0 1 1 1 0 Membrane protein of unknown function DUF63 Poxvirus_B22R_N PF13169.6 NODE_43082_length_468_cov_2.531178_g35424_i0reverse_frame_1 - 0.0084 16.6 4.3 0.0084 16.6 4.3 2.0 2 0 0 2 2 2 1 Poxvirus B22R protein N-terminal Cys_rich_CPXG PF14255.6 NODE_43077_length_468_cov_3.069284_g35419_i0reverse_frame_1 - 1.3 9.0 8.2 5.6 7.0 0.2 2.7 3 0 0 3 3 3 0 Cysteine-rich CPXCG YSIRK_signal PF04650.17 NODE_43070_length_468_cov_4.099307_g35412_i0reverse_frame_1 - 0.12 12.3 0.8 0.28 11.1 0.8 1.6 1 0 0 1 1 1 0 YSIRK type signal peptide DUF1940 PF09155.10 NODE_43069_length_468_cov_4.122402_g35411_i0forward_frame_1 - 0.018 15.1 0.1 0.045 13.8 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1940) TPR_7 PF13176.6 NODE_43069_length_468_cov_4.122402_g35411_i0forward_frame_1 - 0.038 14.0 0.0 0.083 13.0 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat PE-PPE PF08237.11 NODE_43069_length_468_cov_4.122402_g35411_i0forward_frame_1 - 0.14 11.6 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 PE-PPE domain zf-B_box PF00643.24 NODE_43069_length_468_cov_4.122402_g35411_i0forward_frame_1 - 7.9 6.7 15.3 4.2 7.6 12.8 1.9 2 1 0 2 2 2 0 B-box zinc finger Sporozoite_P67 PF05642.11 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_1 - 0.87 7.6 16.1 0.82 7.7 16.1 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen B277 PF17623.2 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_1 - 6.3 5.8 8.4 8 5.4 8.4 1.3 1 0 0 1 1 1 0 Domain of unknown function PRIMA1 PF16101.5 NODE_43064_length_468_cov_12.101617_g35406_i0forward_frame_1 - 0.88 9.6 3.9 1.2 9.2 3.9 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 AAA_7 PF12775.7 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 4.6e-06 26.3 0.0 6.5e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_25 PF13481.6 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.0069 16.0 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.01 15.7 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.013 16.0 0.0 0.024 15.1 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.017 15.7 0.0 0.028 14.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.021 15.2 0.1 0.21 12.0 0.0 2.1 2 0 0 2 2 2 0 RNA helicase ATPase_2 PF01637.18 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.024 14.6 0.0 0.039 13.9 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.032 14.2 0.1 0.22 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.14 12.4 0.1 0.91 9.8 0.0 2.0 1 1 1 2 2 2 0 AAA domain Guanylate_kin PF00625.21 NODE_43054_length_468_cov_71.676674_g35397_i0reverse_frame_1 - 0.15 11.7 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Guanylate kinase RRM_1 PF00076.22 NODE_43036_length_468_cov_185.175520_g35379_i0forward_frame_1 - 1e-17 63.7 0.0 1.7e-17 63.0 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 NODE_43036_length_468_cov_185.175520_g35379_i0forward_frame_1 - 0.13 12.3 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif TMEM247 PF15444.6 NODE_43033_length_468_cov_253.256351_g35376_i0reverse_frame_1 - 8.1 6.4 5.9 12 5.9 5.9 1.3 1 0 0 1 1 1 0 Transmembrane protein 247 PSI_PsaE PF02427.17 NODE_43028_length_468_cov_2438.466513_g34665_i2reverse_frame_1 - 5.7e-24 83.6 1.3 7.8e-24 83.1 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE Chloroa_b-bind PF00504.21 NODE_43026_length_468_cov_4637.921478_g35373_i0reverse_frame_1 - 2e-22 80.5 0.0 2.8e-22 80.0 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein DUF2149 PF09919.9 NODE_43020_length_469_cov_1.716590_g35368_i0forward_frame_3 - 0.07 13.4 0.1 0.12 12.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) PIN_6 PF17146.4 NODE_43018_length_469_cov_2.276498_g31065_i1forward_frame_3 - 0.041 14.4 0.8 0.13 12.8 0.8 1.8 1 1 0 1 1 1 0 PIN domain of ribonuclease Cas9_PI2 PF18070.1 NODE_43018_length_469_cov_2.276498_g31065_i1forward_frame_2 - 0.014 16.2 0.3 0.048 14.4 0.3 1.9 1 0 0 1 1 1 0 CRISPR-Cas9 PI domain Presenilin PF01080.17 NODE_43018_length_469_cov_2.276498_g31065_i1forward_frame_2 - 0.2 10.4 0.2 0.22 10.3 0.2 1.1 1 0 0 1 1 1 0 Presenilin Vpu PF00558.19 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_3 - 0.024 14.4 0.1 0.04 13.7 0.1 1.3 1 0 0 1 1 1 0 Vpu protein TraL PF07178.11 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_3 - 0.042 14.3 0.1 0.072 13.6 0.1 1.4 1 0 0 1 1 1 0 TraL protein DUF4381 PF14316.6 NODE_43005_length_469_cov_4.271889_g35354_i0reverse_frame_3 - 0.16 12.2 1.1 0.22 11.7 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) SPP PF06550.11 NODE_43005_length_469_cov_4.271889_g35354_i0forward_frame_2 - 0.0095 15.4 0.4 0.015 14.8 0.4 1.2 1 0 0 1 1 1 1 Signal-peptide peptidase, presenilin aspartyl protease DUF5525 PF17663.1 NODE_43005_length_469_cov_4.271889_g35354_i0forward_frame_2 - 0.077 11.1 0.2 0.083 11.0 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) Zip PF02535.22 NODE_43003_length_469_cov_5.124424_g35352_i0reverse_frame_2 - 0.2 10.8 3.4 0.23 10.6 3.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter FN3_7 PF18447.1 NODE_43000_length_469_cov_8.974654_g35349_i0reverse_frame_3 - 0.018 15.3 3.1 0.032 14.5 3.1 1.4 1 0 0 1 1 1 0 Fibronectin type III domain WD40 PF00400.32 NODE_43000_length_469_cov_8.974654_g35349_i0forward_frame_3 - 5.4e-08 33.4 0.8 0.0073 17.1 0.2 2.9 2 2 0 2 2 2 2 WD domain, G-beta repeat DUF3727 PF12527.8 NODE_43000_length_469_cov_8.974654_g35349_i0forward_frame_3 - 0.055 13.7 1.0 0.29 11.4 0.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3727) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks161.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks161.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks161.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks161.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NeA_P2 PF12312.8 NODE_42994_length_469_cov_62.935484_g35343_i0forward_frame_2 - 0.017 14.6 0.5 0.017 14.6 0.5 1.7 2 0 0 2 2 2 0 Nepovirus subgroup A polyprotein WD40_like PF17005.5 NODE_42992_length_469_cov_72.958525_g35341_i0forward_frame_3 - 0.037 13.4 0.1 0.045 13.1 0.1 1.2 1 0 0 1 1 1 0 WD40-like domain EMG1 PF03587.14 NODE_42988_length_469_cov_86.633641_g35337_i0reverse_frame_2 - 0.045 13.4 0.0 0.072 12.7 0.0 1.3 1 0 0 1 1 1 0 EMG1/NEP1 methyltransferase zf-C4 PF00105.18 NODE_42988_length_469_cov_86.633641_g35337_i0forward_frame_2 - 0.031 14.7 0.6 0.031 14.7 0.6 1.8 2 0 0 2 2 2 0 Zinc finger, C4 type (two domains) Flp_C PF05202.12 NODE_42987_length_469_cov_87.677419_g35336_i0forward_frame_2 - 0.021 14.4 0.7 0.031 13.8 0.4 1.4 1 1 0 1 1 1 0 Recombinase Flp protein His_Me_b4a2 PF18275.1 NODE_42986_length_469_cov_90.112903_g35335_i0reverse_frame_3 - 0.0081 16.2 3.5 0.013 15.6 1.2 2.3 2 1 1 3 3 3 1 His-Me finger endonuclease beta4-alpha2 domain Ribosomal_S6e PF01092.19 NODE_42986_length_469_cov_90.112903_g35335_i0reverse_frame_3 - 0.087 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S6e DUF3136 PF11334.8 NODE_42986_length_469_cov_90.112903_g35335_i0forward_frame_3 - 0.17 11.7 3.4 4.6 7.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3136) NHL PF01436.21 NODE_42983_length_469_cov_102.207373_g35332_i0forward_frame_3 - 0.0065 16.5 0.0 0.11 12.5 0.0 2.6 3 0 0 3 3 3 1 NHL repeat MLANA PF14991.6 NODE_42983_length_469_cov_102.207373_g35332_i0forward_frame_2 - 0.35 11.2 4.7 0.56 10.5 4.7 1.5 1 0 0 1 1 1 0 Protein melan-A Herpes_capsid PF06112.11 NODE_42979_length_469_cov_113.124424_g35328_i0forward_frame_3 - 1.5 8.9 8.2 0.6 10.2 6.0 1.4 1 1 0 1 1 1 0 Gammaherpesvirus capsid protein Pollen_Ole_e_I PF01190.17 NODE_42977_length_469_cov_137.308756_g35326_i0reverse_frame_2 - 0.074 13.4 4.7 3.5 8.1 4.2 2.4 2 0 0 2 2 2 0 Pollen proteins Ole e I like Sel1 PF08238.12 NODE_42957_length_470_cov_1.721839_g35311_i0forward_frame_2 - 1.3e-07 32.1 0.1 0.1 13.3 0.0 3.8 4 0 0 4 4 4 3 Sel1 repeat Autotransporter PF03797.19 NODE_42948_length_470_cov_2.425287_g35302_i0reverse_frame_3 - 3.4e-12 46.5 3.8 4.2e-12 46.3 3.8 1.1 1 0 0 1 1 1 1 Autotransporter beta-domain NDK PF00334.19 NODE_42944_length_470_cov_2.845977_g35298_i0forward_frame_3 - 2.3e-22 79.4 0.0 3.1e-22 79.0 0.0 1.2 1 0 0 1 1 1 1 Nucleoside diphosphate kinase NCOA_u2 PF16665.5 NODE_42941_length_470_cov_2.949425_g35295_i0reverse_frame_3 - 1.7 9.0 6.6 0.83 10.0 4.2 1.6 1 1 1 2 2 2 0 Unstructured region on nuclear receptor coactivator protein ProQ PF04352.13 NODE_42941_length_470_cov_2.949425_g35295_i0forward_frame_2 - 1.8e-42 143.7 0.5 2.6e-42 143.2 0.0 1.4 1 1 1 2 2 2 1 ProQ/FINO family PARP_reg PF02877.14 NODE_42941_length_470_cov_2.949425_g35295_i0forward_frame_2 - 0.063 13.4 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase, regulatory domain DUF4407 PF14362.6 NODE_42941_length_470_cov_2.949425_g35295_i0forward_frame_2 - 1.2 8.5 4.8 2.4 7.5 4.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3043 PF11241.8 NODE_42941_length_470_cov_2.949425_g35295_i0forward_frame_2 - 4 7.4 8.3 5.8 6.9 8.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Notch PF00066.17 NODE_42939_length_470_cov_3.158621_g35293_i0reverse_frame_3 - 0.12 12.9 1.1 0.12 12.9 1.1 2.2 2 0 0 2 2 2 0 LNR domain Josephin PF02099.17 NODE_42935_length_470_cov_4.052874_g35289_i0reverse_frame_3 - 0.084 13.0 4.8 0.048 13.8 3.1 1.3 1 1 0 1 1 1 0 Josephin DUF2116 PF09889.9 NODE_42935_length_470_cov_4.052874_g35289_i0reverse_frame_3 - 3.4 7.7 4.8 1.7 8.7 0.9 2.4 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) TIG_plexin PF17960.1 NODE_42929_length_470_cov_44.549425_g35283_i0reverse_frame_3 - 0.021 14.8 0.1 0.032 14.2 0.1 1.3 1 0 0 1 1 1 0 TIG domain ESM4 PF15952.5 NODE_42925_length_470_cov_69.850575_g35279_i0reverse_frame_3 - 0.046 14.1 5.8 0.056 13.9 5.8 1.2 1 0 0 1 1 1 0 Enhancer of split M4 family CNH PF00780.22 NODE_42925_length_470_cov_69.850575_g35279_i0reverse_frame_2 - 0.012 15.3 1.0 0.014 15.0 1.0 1.1 1 0 0 1 1 1 0 CNH domain Oxidored-like PF09791.9 NODE_42924_length_470_cov_73.894253_g35278_i0reverse_frame_3 - 1.2 8.9 10.9 1 9.1 0.2 3.4 3 0 0 3 3 3 0 Oxidoreductase-like protein, N-terminal MORN PF02493.20 NODE_42912_length_470_cov_103.921839_g35266_i0forward_frame_2 - 0.05 13.5 8.6 0.22 11.5 0.0 3.7 4 0 0 4 4 4 0 MORN repeat DUF5330 PF17264.2 NODE_42903_length_470_cov_168.271264_g35258_i0reverse_frame_3 - 0.074 13.1 0.3 0.14 12.1 0.3 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5330) LOB PF03195.14 NODE_42899_length_470_cov_200.105747_g35254_i0reverse_frame_2 - 0.037 14.6 3.4 0.14 12.7 0.3 2.3 1 1 1 2 2 2 0 Lateral organ boundaries (LOB) domain Carla_C4 PF01623.17 NODE_42896_length_470_cov_490.388506_g35251_i0reverse_frame_2 - 3.3 7.7 9.1 0.074 13.0 1.3 2.0 1 1 1 2 2 2 0 Carlavirus putative nucleic acid binding protein UQ_con PF00179.26 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_3 - 2.8e-52 176.1 0.0 3.3e-52 175.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_3 - 0.00047 20.4 0.1 0.00065 20.0 0.0 1.4 2 0 0 2 2 2 1 RWD domain Prok-E2_B PF14461.6 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_3 - 0.0033 17.1 0.0 0.0042 16.8 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 NODE_42893_length_470_cov_979.016092_g35249_i0reverse_frame_3 - 0.028 14.3 0.1 0.057 13.3 0.0 1.5 2 0 0 2 2 2 0 UEV domain VMA21 PF09446.10 NODE_42884_length_471_cov_2.229358_g35243_i0forward_frame_3 - 4.5 7.5 14.7 0.68 10.1 7.8 2.5 1 1 1 2 2 2 0 VMA21-like domain HTH_42 PF06224.12 NODE_42884_length_471_cov_2.229358_g35243_i0forward_frame_2 - 0.31 10.5 0.0 0.41 10.1 0.0 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain DCR PF14047.6 NODE_42883_length_471_cov_2.353211_g35242_i0forward_frame_3 - 0.014 15.6 0.1 0.033 14.4 0.0 1.5 1 1 0 1 1 1 0 Dppa2/4 conserved region CRAL_TRIO PF00650.20 NODE_42879_length_471_cov_3.032110_g35238_i0forward_frame_3 - 0.032 13.9 0.2 0.32 10.7 0.1 2.1 2 0 0 2 2 2 0 CRAL/TRIO domain AAA_31 PF13614.6 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 2.1e-08 34.3 0.1 3.5e-08 33.6 0.1 1.3 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 3.4e-07 30.4 0.1 6.2e-07 29.5 0.1 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 8.9e-05 22.1 0.2 0.00014 21.5 0.2 1.3 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SRP54 PF00448.22 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.00033 20.4 0.1 0.00047 19.8 0.1 1.4 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain CBP_BcsQ PF06564.12 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.0043 16.6 0.0 0.0061 16.1 0.0 1.2 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ DnaB_C PF03796.15 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.0052 16.1 0.1 0.0062 15.9 0.1 1.2 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_26 PF13500.6 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.01 15.7 0.1 0.018 14.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.016 14.7 0.1 0.022 14.2 0.1 1.3 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.041 13.1 0.1 0.11 11.7 0.1 1.7 1 1 1 2 2 2 0 Anion-transporting ATPase DAHP_synth_1 PF00793.20 NODE_42877_length_471_cov_3.178899_g35236_i0forward_frame_3 - 0.08 11.8 0.2 0.24 10.2 0.1 1.7 1 1 1 2 2 2 0 DAHP synthetase I family Nucleos_tra2_N PF01773.20 NODE_42876_length_471_cov_4.105505_g35235_i0forward_frame_2 - 3.6e-22 78.7 3.0 3.6e-22 78.7 3.0 2.2 2 1 1 3 3 3 1 Na+ dependent nucleoside transporter N-terminus Gate PF07670.14 NODE_42876_length_471_cov_4.105505_g35235_i0forward_frame_2 - 0.00026 21.2 2.9 0.00026 21.2 2.9 2.0 2 1 0 2 2 2 1 Nucleoside recognition DUF4750 PF15938.5 NODE_42876_length_471_cov_4.105505_g35235_i0forward_frame_2 - 5.7 6.7 9.2 0.36 10.5 2.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) SPRY PF00622.28 NODE_42867_length_471_cov_57.197248_g35226_i0reverse_frame_3 - 1.1e-08 35.2 0.4 1.5e-08 34.8 0.4 1.2 1 0 0 1 1 1 1 SPRY domain Peptidase_C92 PF05708.12 NODE_42856_length_471_cov_100.481651_g35216_i0forward_frame_3 - 7.3e-06 26.2 0.0 1.1e-05 25.7 0.0 1.5 1 1 0 1 1 1 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family HEAT_PBS PF03130.16 NODE_42856_length_471_cov_100.481651_g35216_i0forward_frame_3 - 0.04 14.6 0.1 0.09 13.5 0.1 1.5 1 0 0 1 1 1 0 PBS lyase HEAT-like repeat Bac_surface_Ag PF01103.23 NODE_42854_length_471_cov_114.635321_g35214_i0reverse_frame_2 - 0.072 12.6 0.1 0.09 12.2 0.1 1.1 1 0 0 1 1 1 0 Surface antigen Ribosomal_L37ae PF01780.19 NODE_42853_length_471_cov_117.633028_g35213_i0reverse_frame_3 - 0.022 14.9 0.8 0.048 13.7 0.8 1.6 1 0 0 1 1 1 0 Ribosomal L37ae protein family zf-RING_4 PF14570.6 NODE_42853_length_471_cov_117.633028_g35213_i0forward_frame_2 - 0.031 14.0 0.2 0.054 13.3 0.2 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Bunya_NS-S PF01104.17 NODE_42849_length_471_cov_134.892202_g35209_i0reverse_frame_3 - 0.05 13.4 0.4 0.098 12.5 0.4 1.5 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-s HEAT_2 PF13646.6 NODE_42849_length_471_cov_134.892202_g35209_i0forward_frame_3 - 2.4e-05 24.7 4.0 6.8e-05 23.2 2.7 2.3 1 1 2 3 3 3 2 HEAT repeats HEAT PF02985.22 NODE_42849_length_471_cov_134.892202_g35209_i0forward_frame_3 - 0.0096 16.1 1.9 2.6 8.6 0.4 3.7 3 1 0 3 3 3 1 HEAT repeat ELYS PF13934.6 NODE_42849_length_471_cov_134.892202_g35209_i0forward_frame_3 - 0.043 13.8 0.3 0.06 13.3 0.3 1.2 1 0 0 1 1 1 0 Nuclear pore complex assembly AbiJ_NTD5 PF18865.1 NODE_42849_length_471_cov_134.892202_g35209_i0forward_frame_3 - 0.051 13.4 0.0 0.77 9.6 0.0 2.1 2 0 0 2 2 2 0 AbiJ N-terminal domain 5 Arm PF00514.23 NODE_42849_length_471_cov_134.892202_g35209_i0forward_frame_3 - 0.063 13.3 2.0 10 6.3 0.0 3.2 3 1 0 3 3 3 0 Armadillo/beta-catenin-like repeat IL7 PF01415.16 NODE_42844_length_471_cov_169.114679_g35204_i0reverse_frame_3 - 0.0043 17.1 1.4 0.0067 16.4 1.4 1.3 1 0 0 1 1 1 1 Interleukin 7/9 family ANAPC5 PF12862.7 NODE_42844_length_471_cov_169.114679_g35204_i0forward_frame_3 - 0.14 12.3 0.1 0.25 11.4 0.1 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 5 SPC22 PF04573.12 NODE_42844_length_471_cov_169.114679_g35204_i0forward_frame_3 - 0.18 11.3 2.6 0.18 11.3 1.7 1.4 1 1 0 1 1 1 0 Signal peptidase subunit AmoC PF04896.12 NODE_42844_length_471_cov_169.114679_g35204_i0forward_frame_2 - 0.11 11.7 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C COX8 PF02285.15 NODE_42843_length_471_cov_170.426606_g35203_i0forward_frame_2 - 0.12 12.2 2.6 0.19 11.7 0.1 2.3 2 0 0 2 2 2 0 Cytochrome oxidase c subunit VIII Abhydro_lipase PF04083.16 NODE_42841_length_471_cov_185.096330_g35201_i0reverse_frame_2 - 0.093 12.3 0.4 0.37 10.4 0.0 2.0 2 0 0 2 2 2 0 Partial alpha/beta-hydrolase lipase region VirC1 PF07015.11 NODE_42837_length_471_cov_270.832569_g35198_i0reverse_frame_3 - 0.027 13.8 0.2 0.037 13.3 0.2 1.1 1 0 0 1 1 1 0 VirC1 protein DUF3363 PF11843.8 NODE_42837_length_471_cov_270.832569_g35198_i0reverse_frame_2 - 0.0081 15.1 2.0 0.0094 14.9 2.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3363) SOCS_box PF07525.16 NODE_42837_length_471_cov_270.832569_g35198_i0forward_frame_3 - 7.1 7.1 9.1 35 4.9 0.4 3.3 1 1 1 2 2 2 0 SOCS box Cytochrome_CBB3 PF13442.6 NODE_42835_length_471_cov_512.944954_g35196_i0reverse_frame_2 - 1.8e-08 34.6 0.0 3.2e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 NODE_42835_length_471_cov_512.944954_g35196_i0reverse_frame_2 - 0.00055 19.7 0.0 0.00083 19.1 0.0 1.3 1 0 0 1 1 1 1 Cytochrome c-550 domain Cytochrom_C PF00034.21 NODE_42835_length_471_cov_512.944954_g35196_i0reverse_frame_2 - 0.045 14.9 0.2 0.068 14.3 0.2 1.6 1 1 0 1 1 1 0 Cytochrome c DUF979 PF06166.12 NODE_42831_length_471_cov_833.002294_g35192_i0reverse_frame_3 - 0.0025 17.0 0.1 0.0028 16.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF979) Herpes_U59 PF04529.12 NODE_42831_length_471_cov_833.002294_g35192_i0forward_frame_3 - 0.14 11.2 1.9 0.18 10.8 1.9 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein EnY2 PF10163.9 NODE_42829_length_471_cov_2036.282110_g35190_i0reverse_frame_2 - 9.8e-29 99.6 1.4 1.3e-28 99.2 1.4 1.2 1 0 0 1 1 1 1 Transcription factor e(y)2 RPA_interact_N PF14766.6 NODE_42829_length_471_cov_2036.282110_g35190_i0reverse_frame_2 - 0.13 11.9 1.1 0.31 10.7 1.1 1.7 1 0 0 1 1 1 0 Replication protein A interacting N-terminal DUF3079 PF11278.8 ORF98803 - 1.7 8.5 6.8 4.1 7.3 2.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3079) AC_N PF16214.5 ORF98506 - 4.2 6.4 7.5 4.7 6.2 7.5 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region CCAP PF11105.8 ORF98332 - 0.046 13.7 0.1 0.065 13.2 0.1 1.2 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a zf-C2H2 PF00096.26 ORF96964 - 0.0001 22.5 10.3 0.041 14.3 0.1 3.1 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF96964 - 0.00015 22.1 1.1 0.00025 21.3 0.2 1.9 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF96964 - 0.014 16.2 7.2 0.73 10.8 1.0 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger zf-met PF12874.7 ORF96964 - 0.036 14.5 2.2 0.51 10.8 1.6 2.6 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 ORF96964 - 1.2 9.2 5.1 0.31 11.1 0.9 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger GerE PF00196.19 ORF92637 - 5.1e-24 83.6 0.2 8.9e-24 82.8 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Response_reg PF00072.24 ORF92637 - 1.9e-15 57.0 0.0 3.9e-15 56.0 0.0 1.5 2 0 0 2 2 2 1 Response regulator receiver domain Sigma70_r4_2 PF08281.12 ORF92637 - 0.0018 17.9 0.0 0.0031 17.2 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 ORF92637 - 0.0025 17.4 0.1 0.0055 16.2 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 ORF92637 - 0.0029 17.1 0.2 0.011 15.3 0.0 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.6 ORF92637 - 0.13 12.1 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_38 PF13936.6 ORF92637 - 0.13 12.0 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_ECF PF07638.11 ORF92637 - 0.14 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 ECF sigma factor DUF4727 PF15856.5 ORF91575 - 0.0047 16.6 4.3 0.0047 16.6 4.3 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4727) DUF2083 PF09856.9 ORF90796 - 7.7 6.4 8.7 0.6 9.9 3.9 1.7 2 0 0 2 2 2 0 Predicted transcriptional regulator (DUF2083) DUF505 PF04458.12 ORF88447 - 0.1 11.0 0.1 0.12 10.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HCV_NS5a_1a PF08300.13 ORF85847 - 0.29 11.3 0.1 0.29 11.3 0.1 2.0 2 1 1 3 3 3 0 Hepatitis C virus non-structural 5a zinc finger domain BDV_P24 PF06595.11 ORF83968 - 0.32 10.8 3.6 0.25 11.2 1.2 1.9 2 0 0 2 2 2 0 Borna disease virus P24 protein DUF4502 PF14950.6 ORF82243 - 0.16 11.4 0.2 0.19 11.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4502) adh_short_C2 PF13561.6 ORF8152 - 2.2e-26 92.9 0.0 2.6e-26 92.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF8152 - 7.1e-23 81.1 0.1 8.2e-23 80.9 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase DUF5551 PF17705.1 ORF80805 - 0.058 13.0 0.1 0.079 12.6 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5551) MTCP1 PF08991.10 ORF80805 - 0.41 10.9 10.4 0.84 9.9 5.9 2.7 2 1 0 2 2 2 0 Mature-T-Cell Proliferation I type PPR_3 PF13812.6 ORF80451 - 5.1e-08 32.9 0.0 0.0011 19.1 0.0 2.3 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF80451 - 2.3e-07 30.9 0.1 0.00033 20.8 0.0 2.4 1 1 1 2 2 2 2 PPR repeat family PPR_1 PF12854.7 ORF80451 - 0.0075 15.9 0.9 0.011 15.5 0.1 1.6 2 0 0 2 2 2 1 PPR repeat PPR PF01535.20 ORF80451 - 0.18 12.1 1.2 4.1 7.9 1.2 2.7 1 1 0 1 1 1 0 PPR repeat Sugar_tr PF00083.24 ORF79588 - 7.3e-23 81.1 7.6 7.7e-23 81.1 7.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Orthoreo_P10 PF07204.11 ORF79588 - 0.012 15.6 0.3 0.028 14.3 0.0 1.7 2 0 0 2 2 2 0 Orthoreovirus membrane fusion protein p10 Oxidored_q3 PF00499.20 ORF79588 - 3.1 7.5 12.2 0.21 11.3 1.8 2.3 1 1 1 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 N_methyl PF07963.12 ORF7824 - 1.6e-07 30.6 1.1 2.5e-07 30.0 1.1 1.3 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif GspL_C PF12693.7 ORF7824 - 0.0097 15.8 2.2 0.017 15.0 2.2 1.3 1 0 0 1 1 1 1 GspL periplasmic domain TPR_21 PF09976.9 ORF7824 - 0.014 15.2 0.4 0.018 14.8 0.4 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain CedA PF10729.9 ORF77774 - 0.1 12.5 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Cell division activator CedA IMUP PF15761.5 ORF77486 - 1.9 9.2 9.3 2.8 8.7 9.3 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein Zn_ribbon_SprT PF17283.2 ORF75774 - 0.062 13.2 2.2 0.062 13.2 2.2 3.0 3 0 0 3 3 3 0 SprT-like zinc ribbon domain UQ_con PF00179.26 ORF72183 - 3.2e-36 124.0 0.0 3.6e-36 123.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF4252 PF14060.6 ORF71954 - 0.17 11.8 0.1 0.17 11.8 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4252) ESM4 PF15952.5 ORF71954 - 0.34 11.3 9.1 0.47 10.9 9.1 1.1 1 0 0 1 1 1 0 Enhancer of split M4 family PNISR PF15996.5 ORF71954 - 1.1 9.5 26.8 1.4 9.2 26.8 1.1 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR Paramyxo_ncap PF00973.19 ORF71954 - 4.3 6.1 8.2 5.3 5.8 8.2 1.1 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Sec62 PF03839.16 ORF71954 - 9.3 5.7 10.7 10 5.5 10.7 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 Nop25 PF09805.9 ORF71954 - 9.9 6.6 27.6 8 6.9 26.3 1.5 1 1 0 1 1 1 0 Nucleolar protein 12 (25kDa) PhoLip_ATPase_C PF16212.5 ORF71351 - 1e-05 25.4 0.8 1.2e-05 25.2 0.8 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal ATP-synt_8 PF00895.20 ORF71351 - 4.6 7.8 6.0 1.7 9.2 2.3 2.2 1 1 1 2 2 2 0 ATP synthase protein 8 MIG-14_Wnt-bd PF06664.12 ORF69974 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF69974 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF69974 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF69974 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF69974 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF69974 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF69974 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF69974 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF69974 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF69974 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF69974 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF69974 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF69974 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) EPF PF17181.4 ORF69318 - 0.017 15.1 2.9 0.042 13.9 0.3 2.5 2 0 0 2 2 2 0 Epidermal patterning factor proteins TRSP PF12500.8 ORF68737 - 0.0051 16.7 0.0 0.007 16.3 0.0 1.1 1 0 0 1 1 1 1 TRSP domain C terminus to PRTase_2 AP3B1_C PF14796.6 ORF67913 - 0.086 13.1 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Clathrin-adaptor complex-3 beta-1 subunit C-terminal Transket_pyr PF02779.24 ORF65993 - 1.6e-19 70.3 0.0 1.9e-19 70.0 0.0 1.1 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain OxoGdeHyase_C PF16870.5 ORF65993 - 3.2e-07 30.1 0.0 4.9e-07 29.5 0.0 1.3 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal DUF1364 PF07102.12 ORF63382 - 1.6 8.6 12.8 1.5 8.8 0.7 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1364) EF-hand_7 PF13499.6 ORF61503 - 6.6e-16 58.5 6.7 1.9e-13 50.6 0.1 2.6 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF61503 - 4.2e-15 54.1 22.3 7.6e-07 28.2 0.6 5.1 5 1 0 5 5 5 3 EF hand EF-hand_6 PF13405.6 ORF61503 - 1.1e-13 49.9 15.3 1.5e-07 30.8 0.3 5.2 4 2 1 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF61503 - 1.1e-07 31.6 13.0 6e-06 26.0 0.1 4.6 3 2 1 4 4 4 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF61503 - 8.8e-06 26.0 0.3 7.3e-05 23.0 0.1 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF61503 - 0.0031 16.9 0.4 0.0031 16.9 0.4 4.8 4 1 1 5 5 5 2 EF hand UQ_con PF00179.26 ORF61487 - 9.2e-36 122.6 0.0 1.1e-35 122.4 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme VWA PF00092.28 ORF61315 - 1.1e-05 25.8 0.0 1.4e-05 25.5 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain P16-Arc PF04699.14 ORF59767 - 1.2e-14 55.0 2.2 1.4e-14 54.8 2.2 1.1 1 0 0 1 1 1 1 ARP2/3 complex 16 kDa subunit (p16-Arc) CENP-N PF05238.13 ORF59767 - 0.049 12.9 1.3 0.053 12.8 1.3 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Spermine_synth PF01564.17 ORF59767 - 0.12 11.8 2.0 0.13 11.6 2.0 1.2 1 0 0 1 1 1 0 Spermine/spermidine synthase domain Erythro-docking PF09277.11 ORF59298 - 0.031 14.2 0.1 0.073 13.0 0.1 1.6 1 0 0 1 1 1 0 Erythronolide synthase, docking APC_u9 PF16633.5 ORF57938 - 0.22 12.6 4.2 0.1 13.7 1.9 1.6 2 0 0 2 2 2 0 Unstructured region on APC between 1st two creatine-rich regions DUF4025 PF13217.6 ORF57938 - 1.6 8.6 7.3 9.3 6.2 0.3 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF4025) YlaC PF10777.9 ORF57789 - 3.7e-68 228.2 0.3 4.1e-68 228.1 0.3 1.0 1 0 0 1 1 1 1 Inner membrane protein YlaC DUF1295 PF06966.12 ORF57482 - 2e-32 112.6 0.0 2.4e-32 112.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF57482 - 1.9e-07 31.1 0.6 2.9e-07 30.6 0.6 1.3 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 ORF57482 - 9.2e-07 29.2 0.3 1.2e-06 28.8 0.3 1.2 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 ORF57482 - 1.8e-06 28.3 0.5 2.6e-06 27.8 0.5 1.3 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.17 ORF57482 - 0.00042 19.2 1.2 0.00052 18.9 1.2 1.1 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family NnrU PF07298.11 ORF57482 - 0.22 11.0 0.0 0.43 10.1 0.0 1.5 1 1 0 1 1 1 0 NnrU protein z-alpha PF02295.17 ORF56863 - 0.012 15.6 1.2 2.3 8.3 0.7 2.2 1 1 1 2 2 2 0 Adenosine deaminase z-alpha domain MIG-14_Wnt-bd PF06664.12 ORF56083 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF56083 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF56083 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF56083 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF56083 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF56083 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF56083 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF56083 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF56083 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF56083 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF56083 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF56083 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF56083 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) EF-hand_7 PF13499.6 ORF53978 - 3.5e-13 49.8 0.0 5.9e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF53978 - 1.5e-12 46.1 0.1 3.9e-05 22.9 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF53978 - 7.1e-12 45.0 0.4 1.1e-05 25.2 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF53978 - 3.3e-09 35.8 0.0 1.6e-05 24.2 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF53978 - 1.5e-08 33.9 0.2 6.9e-05 22.5 0.0 2.4 1 1 1 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF53978 - 1.8e-07 31.4 0.1 2.3e-07 31.1 0.1 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region DUF5580 PF17743.1 ORF53978 - 0.00011 21.0 0.0 0.00012 20.8 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5580) EF-hand_11 PF08976.11 ORF53978 - 0.00026 21.8 0.1 0.00042 21.1 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF53978 - 0.002 18.1 0.1 0.0056 16.6 0.1 1.7 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 ORF53978 - 0.0055 16.9 0.4 1.9 8.7 0.0 2.3 2 0 0 2 2 2 2 Dockerin type I domain Ribosomal_L27_C PF18471.1 ORF53978 - 0.0097 15.3 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal L27 protein C-terminal domain EF-hand_10 PF14788.6 ORF53978 - 0.011 15.6 0.0 0.81 9.6 0.0 2.2 1 1 1 2 2 2 0 EF hand TerB PF05099.13 ORF53978 - 0.012 15.5 0.8 0.026 14.5 0.7 1.6 1 1 0 1 1 1 0 Tellurite resistance protein TerB EF-hand_9 PF14658.6 ORF53978 - 0.015 15.6 0.0 0.045 14.1 0.0 1.7 2 0 0 2 2 2 0 EF-hand domain RCC1_2 PF13540.6 ORF50850 - 0.0038 17.0 15.5 0.091 12.6 0.3 3.8 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF50850 - 0.049 13.7 1.0 9.1 6.3 0.4 2.9 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Abhydrolase_4 PF08386.10 ORF5066 - 0.22 11.7 1.9 1.9 8.6 0.0 2.1 1 1 1 2 2 2 0 TAP-like protein ChapFlgA PF13144.6 ORF49396 - 8.4e-26 90.4 0.9 1.1e-25 90.0 0.9 1.2 1 0 0 1 1 1 1 Chaperone for flagella basal body P-ring formation SAF PF08666.12 ORF49396 - 6.9e-09 36.2 0.0 5.1e-08 33.4 0.0 2.0 2 0 0 2 2 2 1 SAF domain ACP_syn_III_C PF08541.10 ORF49396 - 0.00037 20.6 0.0 0.23 11.7 0.0 2.3 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ChapFlgA_N PF17656.1 ORF49396 - 0.041 14.0 0.4 0.26 11.5 0.1 2.4 3 0 0 3 3 3 0 FlgA N-terminal domain HxlR PF01638.17 ORF46036 - 2.5e-32 110.6 0.1 1.2e-31 108.3 0.0 1.8 1 1 1 2 2 2 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 ORF46036 - 0.022 14.6 0.2 0.18 11.7 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Peptidase_M41 PF01434.18 ORF44435 - 9.5e-27 94.1 1.7 2.4e-26 92.8 1.7 1.6 1 1 0 1 1 1 1 Peptidase family M41 Cep57_MT_bd PF06657.13 ORF44435 - 0.0024 18.3 0.4 0.0049 17.3 0.4 1.5 1 0 0 1 1 1 1 Centrosome microtubule-binding domain of Cep57 AWPM-19 PF05512.11 ORF44253 - 0.05 13.8 0.3 0.082 13.1 0.3 1.4 1 1 0 1 1 1 0 AWPM-19-like family AWPM-19 PF05512.11 ORF43854 - 0.05 13.8 0.3 0.082 13.1 0.3 1.4 1 1 0 1 1 1 0 AWPM-19-like family TMEM154 PF15102.6 ORF42675 - 1.3e-06 28.4 3.3 2.5e-06 27.5 3.3 1.5 1 1 0 1 1 1 1 TMEM154 protein family Insulin_TMD PF17870.1 ORF42675 - 0.0044 17.1 0.8 0.0065 16.5 0.8 1.3 1 0 0 1 1 1 1 Insulin receptor trans-membrane segment Podoplanin PF05808.11 ORF42675 - 0.0046 17.1 4.9 0.0086 16.2 4.9 1.4 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF42675 - 0.0051 16.3 0.5 0.0056 16.1 0.5 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5305) Sigma_reg_N PF13800.6 ORF42675 - 0.0066 16.7 0.8 0.015 15.5 0.8 1.6 1 0 0 1 1 1 1 Sigma factor regulator N-terminal CD34_antigen PF06365.12 ORF42675 - 0.016 14.8 0.0 0.027 14.0 0.0 1.4 1 0 0 1 1 1 0 CD34/Podocalyxin family SCF PF02404.15 ORF42675 - 0.037 13.4 0.4 0.085 12.2 0.3 1.6 1 1 1 2 2 2 0 Stem cell factor DUF1310 PF07006.11 ORF42675 - 0.046 13.7 0.0 0.088 12.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1310) DHHC PF01529.20 ORF42675 - 0.09 12.9 0.8 0.12 12.5 0.8 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Ribosomal_L34 PF00468.17 ORF4244 - 0.0014 18.5 11.3 0.045 13.7 11.3 2.3 1 1 0 1 1 1 1 Ribosomal protein L34 MORN PF02493.20 ORF41417 - 8.9e-38 126.0 40.9 1.7e-07 30.7 0.8 7.5 8 0 0 8 8 8 7 MORN repeat DUF3048_C PF17479.2 ORF41417 - 0.0097 16.3 9.1 1 9.8 0.2 3.1 2 1 1 3 3 3 3 Protein of unknown function (DUF3048) C-terminal domain ID PF18543.1 ORF41417 - 0.7 10.0 4.4 32 4.6 0.0 4.3 5 0 0 5 5 5 0 Intracellular delivery domain MIG-14_Wnt-bd PF06664.12 ORF4122 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF4122 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF4122 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF4122 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF4122 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF4122 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF4122 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF4122 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF4122 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF4122 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF4122 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF4122 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF4122 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Herpes_U5 PF05999.11 ORF38772 - 0.012 14.4 0.1 0.016 14.0 0.1 1.3 1 0 0 1 1 1 0 Herpesvirus U5-like family DUF2175 PF09943.9 ORF38180 - 0.27 11.5 1.3 0.37 11.1 1.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) BatA PF07584.11 ORF37974 - 0.035 14.5 0.5 0.078 13.3 0.5 1.5 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal SH3_11 PF18103.1 ORF36634 - 0.02 15.1 3.2 0.42 10.8 1.0 2.5 2 0 0 2 2 2 0 Retroviral integrase C-terminal SH3 domain Luteo_P1-P2 PF08467.10 ORF34350 - 0.095 11.9 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Luteovirus RNA polymerase P1-P2/replicase DUF601 PF04642.12 ORF33013 - 0.026 14.1 1.0 0.033 13.7 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF601 DivIC PF04977.15 ORF31346 - 0.0002 21.1 1.0 0.0002 21.1 1.0 3.1 3 1 1 4 4 4 2 Septum formation initiator SlyX PF04102.12 ORF31346 - 0.0031 18.1 0.9 0.0031 18.1 0.9 3.1 2 1 1 3 3 3 1 SlyX Peptidase_M61 PF05299.12 ORF31346 - 0.079 13.4 0.3 0.21 12.0 0.3 1.8 1 1 0 1 1 1 0 M61 glycyl aminopeptidase MscS_porin PF12795.7 ORF31346 - 0.079 12.5 21.3 0.028 14.0 15.7 2.0 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain Raftlin PF15250.6 ORF31346 - 0.088 11.5 6.8 0.096 11.4 6.8 1.0 1 0 0 1 1 1 0 Raftlin DUF3533 PF12051.8 ORF31346 - 0.58 9.0 3.3 0.64 8.9 3.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) KfrA_N PF11740.8 ORF31346 - 1.1 9.9 9.4 4.5 8.0 7.7 2.2 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term FlaC_arch PF05377.11 ORF31346 - 1.2 9.6 18.5 0.21 12.0 3.2 3.4 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) DUF4472 PF14739.6 ORF31346 - 1.7 9.4 23.1 2.5 8.9 8.5 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) PCRF PF03462.18 ORF31346 - 1.8 8.4 19.0 3 7.7 6.9 2.0 1 1 1 2 2 2 0 PCRF domain Sipho_Gp157 PF05565.11 ORF31346 - 2.3 8.2 23.4 3.8 7.5 12.1 2.2 1 1 1 2 2 2 0 Siphovirus Gp157 UPF0242 PF06785.11 ORF31346 - 6.4 6.8 25.3 8.3 6.5 7.6 2.3 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus TNFR_c6 PF00020.18 ORF3134 - 0.017 15.5 15.2 0.099 13.1 5.2 2.5 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region Glyco_hydro_79n PF03662.14 ORF2598 - 0.097 11.6 0.2 0.14 11.1 0.2 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 79, N-terminal domain DUF1801 PF08818.11 ORF2320 - 0.097 13.2 0.0 0.15 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DU1801) DUF1848 PF08902.11 ORF22457 - 0.092 12.4 2.2 0.13 12.0 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1848) Abhydrolase_4 PF08386.10 ORF1821 - 0.22 11.7 1.9 1.9 8.6 0.0 2.1 1 1 1 2 2 2 0 TAP-like protein UPF0242 PF06785.11 ORF17853 - 0.034 14.2 8.7 0.036 14.2 8.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Spc7 PF08317.11 ORF17853 - 0.034 13.0 8.1 0.044 12.7 8.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein bZIP_1 PF00170.21 ORF17853 - 0.041 14.0 15.7 0.13 12.3 2.3 3.2 1 1 2 3 3 3 0 bZIP transcription factor ADIP PF11559.8 ORF17853 - 0.043 13.9 8.8 0.063 13.4 8.8 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding RTBV_P46 PF06216.11 ORF17853 - 0.061 12.2 5.1 0.081 11.8 2.1 1.9 1 1 1 2 2 2 0 Rice tungro bacilliform virus P46 protein Seryl_tRNA_N PF02403.22 ORF17853 - 0.073 13.3 8.3 0.11 12.7 8.3 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain JAKMIP_CC3 PF16034.5 ORF17853 - 0.1 12.5 8.9 0.16 11.9 8.9 1.2 1 0 0 1 1 1 0 JAKMIP CC3 domain FapA PF03961.13 ORF17853 - 0.14 10.7 7.5 0.15 10.6 7.5 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF3450 PF11932.8 ORF17853 - 0.18 11.1 8.8 0.39 10.0 8.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) TMF_TATA_bd PF12325.8 ORF17853 - 0.23 11.7 11.1 2.9 8.2 1.2 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF4315 PF14193.6 ORF17853 - 0.23 11.5 9.3 0.51 10.4 8.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4315) DivIC PF04977.15 ORF17853 - 0.25 11.1 12.5 1.2 9.0 2.5 2.4 1 1 0 2 2 2 0 Septum formation initiator DUF1664 PF07889.12 ORF17853 - 0.29 11.2 6.6 0.45 10.6 5.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Prefoldin_2 PF01920.20 ORF17853 - 0.43 10.6 12.9 0.37 10.8 4.9 2.2 1 1 1 2 2 2 0 Prefoldin subunit TMPIT PF07851.13 ORF17853 - 0.47 9.7 7.3 0.54 9.5 7.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein bZIP_2 PF07716.15 ORF17853 - 0.49 10.5 13.8 1 9.5 4.1 3.1 1 1 2 3 3 3 0 Basic region leucine zipper DUF2570 PF10828.8 ORF17853 - 0.99 9.3 5.8 1.8 8.5 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) APG6_N PF17675.1 ORF17853 - 1.4 9.4 13.7 3.2 8.3 13.7 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region YabA PF06156.13 ORF17853 - 4.1 8.1 10.0 17 6.1 10.0 2.0 1 1 0 1 1 1 0 Initiation control protein YabA Takusan PF04822.13 ORF17853 - 5.1 7.0 12.6 1.2 9.1 3.8 2.3 1 1 1 2 2 2 0 Takusan U-box PF04564.15 ORF16394 - 8.3e-10 38.7 0.0 1.4e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF16394 - 0.00068 19.7 0.0 0.0014 18.7 0.0 1.5 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein MIG-14_Wnt-bd PF06664.12 ORF16063 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF16063 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF16063 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF16063 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF16063 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF16063 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF16063 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF16063 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF16063 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF16063 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF16063 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF16063 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF16063 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Ricin_B_lectin PF00652.22 ORF15260 - 0.075 13.3 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin domain CTV_P33 PF07184.11 ORF151168 - 0.13 11.3 13.4 0.15 11.1 13.4 1.2 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein Abhydrolase_4 PF08386.10 ORF150939 - 0.2 11.8 1.6 2.7 8.2 0.0 2.1 1 1 1 2 2 2 0 TAP-like protein COX7a PF02238.15 ORF14949 - 0.058 13.8 0.6 0.058 13.8 0.6 1.6 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII PIP49_N PF14875.6 ORF14949 - 0.12 12.3 0.9 0.18 11.6 0.9 1.3 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 CENP-T_N PF16171.5 ORF148367 - 0.00011 21.3 0.6 0.00016 20.7 0.6 1.3 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T N-terminus TMEM173 PF15009.6 ORF147339 - 0.16 11.1 5.5 0.2 10.8 5.5 1.1 1 0 0 1 1 1 0 Transmembrane protein 173 RPA_interact_M PF14767.6 ORF147339 - 0.44 11.1 5.3 0.53 10.9 1.0 2.3 2 0 0 2 2 2 0 Replication protein A interacting middle DUF1366 PF07104.11 ORF147339 - 0.48 10.1 5.6 0.21 11.3 2.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1366) CorA PF01544.18 ORF147339 - 0.54 9.5 5.9 0.66 9.2 5.9 1.4 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein LMBR1 PF04791.16 ORF147339 - 0.56 9.1 7.0 0.66 8.8 7.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein AAA_11 PF13086.6 ORF147339 - 5.2 6.8 7.7 6.4 6.5 7.7 1.2 1 0 0 1 1 1 0 AAA domain Peptidase_M1 PF01433.20 ORF147132 - 1.2e-28 100.2 0.3 1.6e-28 99.8 0.3 1.1 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M61 PF05299.12 ORF147132 - 0.00034 21.0 0.7 0.057 13.8 1.2 2.8 2 1 0 2 2 2 1 M61 glycyl aminopeptidase Peptidase_MA_2 PF13485.6 ORF147132 - 0.059 13.0 0.1 0.12 12.0 0.1 1.5 2 0 0 2 2 2 0 Peptidase MA superfamily DMP12 PF16779.5 ORF146607 - 0.012 15.6 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 DNA-mimic protein Ribosomal_L11 PF00298.19 ORF146292 - 1.8e-25 89.2 0.0 2.7e-25 88.7 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 ORF146292 - 1.9e-25 88.4 0.0 5.5e-25 87.0 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain YwiC PF14256.6 ORF146128 - 1.8 8.9 8.2 0.3 11.4 4.3 1.7 1 1 1 2 2 2 0 YwiC-like protein U-box PF04564.15 ORF146075 - 4.9e-21 74.7 0.1 7.8e-21 74.0 0.1 1.3 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF146075 - 3.5e-05 23.9 0.0 6.8e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein zf-Nse PF11789.8 ORF146075 - 5.2e-05 23.0 0.1 0.00014 21.6 0.0 1.7 2 0 0 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit DUF4535 PF15054.6 ORF146075 - 0.057 13.2 0.3 0.17 11.6 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) SOAR PF16533.5 ORF146075 - 0.089 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 STIM1 Orai1-activating region Sugar_tr PF00083.24 ORF143786 - 7.3e-23 81.1 7.6 7.7e-23 81.1 7.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Orthoreo_P10 PF07204.11 ORF143786 - 0.012 15.6 0.3 0.028 14.3 0.0 1.7 2 0 0 2 2 2 0 Orthoreovirus membrane fusion protein p10 Oxidored_q3 PF00499.20 ORF143786 - 3.1 7.5 12.2 0.21 11.3 1.8 2.3 1 1 1 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FXa_inhibition PF14670.6 ORF139785 - 1.1 9.6 7.3 0.16 12.3 1.6 2.2 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site DUF2704 PF10866.8 ORF137693 - 0.12 12.2 2.1 0.19 11.6 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2704) CC PF04942.14 ORF135517 - 0.13 12.4 0.3 0.29 11.4 0.3 1.6 1 0 0 1 1 1 0 CC domain UBA PF00627.31 ORF13530 - 0.0014 18.4 0.2 0.0032 17.3 0.2 1.6 1 0 0 1 1 1 1 UBA/TS-N domain FTR1 PF03239.14 ORF13530 - 0.014 14.5 0.1 0.018 14.2 0.1 1.1 1 0 0 1 1 1 0 Iron permease FTR1 family UBA_4 PF14555.6 ORF13530 - 0.022 14.6 1.2 0.056 13.3 0.4 2.0 1 1 1 2 2 2 0 UBA-like domain P16-Arc PF04699.14 ORF134599 - 1.2e-14 55.0 2.2 1.4e-14 54.8 2.2 1.1 1 0 0 1 1 1 1 ARP2/3 complex 16 kDa subunit (p16-Arc) CENP-N PF05238.13 ORF134599 - 0.049 12.9 1.3 0.053 12.8 1.3 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Spermine_synth PF01564.17 ORF134599 - 0.12 11.8 2.0 0.13 11.6 2.0 1.2 1 0 0 1 1 1 0 Spermine/spermidine synthase domain MIG-14_Wnt-bd PF06664.12 ORF13185 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF13185 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF13185 - 0.003 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF13185 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF13185 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF13185 - 0.0089 16.2 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF13185 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF13185 - 0.069 12.8 0.0 0.079 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF13185 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF13185 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF13185 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF13185 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF13185 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) PB1-F2 PF11986.8 ORF131022 - 0.15 12.3 0.1 0.26 11.5 0.1 1.3 1 0 0 1 1 1 0 Influenza A Proapoptotic protein DUF2407_C PF13373.6 ORF129947 - 9e-05 22.7 0.1 0.00015 22.0 0.1 1.4 1 1 0 1 1 1 1 DUF2407 C-terminal domain SUR7 PF06687.12 ORF129947 - 0.07 12.7 2.0 0.08 12.6 2.0 1.3 1 1 0 1 1 1 0 SUR7/PalI family Thioredoxin PF00085.20 ORF128183 - 0.012 15.5 0.0 0.017 15.1 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin Pico_P1A PF02226.16 ORF128183 - 0.17 12.0 0.4 0.86 9.7 0.1 2.1 2 0 0 2 2 2 0 Picornavirus coat protein (VP4) zf-RING_13 PF17977.1 ORF126887 - 1.3 9.2 7.4 1.3 9.2 2.0 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Arg_repressor PF01316.21 ORF12176 - 4.8e-26 90.3 0.1 7.1e-26 89.8 0.1 1.3 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain Arg_repressor_C PF02863.18 ORF12176 - 6e-23 80.5 0.2 1.1e-22 79.6 0.2 1.5 1 0 0 1 1 1 1 Arginine repressor, C-terminal domain DUF4911 PF16256.5 ORF12176 - 0.092 12.7 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4911) AAA_22 PF13401.6 ORF12176 - 0.12 12.7 0.0 0.35 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain NapB PF03892.14 ORF119297 - 1.3e-42 144.8 0.1 1.6e-42 144.6 0.1 1.1 1 0 0 1 1 1 1 Nitrate reductase cytochrome c-type subunit (NapB) DUF3365 PF11845.8 ORF119297 - 0.011 16.0 0.8 1.4 9.3 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3365) Paired_CXXCH_1 PF09699.10 ORF119297 - 0.024 14.4 2.5 0.22 11.3 2.5 2.2 1 1 1 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_C7 PF14522.6 ORF119297 - 0.034 14.1 0.4 0.086 12.8 0.4 1.5 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c Cytochrome_CBB3 PF13442.6 ORF119297 - 0.044 14.1 0.8 10 6.5 0.0 2.4 1 1 1 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_NNT PF03264.14 ORF119297 - 0.045 13.4 0.7 0.1 12.3 0.7 1.6 1 1 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region Cytochrom_C PF00034.21 ORF119297 - 0.064 14.4 0.8 1.3 10.2 0.8 2.4 1 1 0 1 1 1 0 Cytochrome c Cytochrome_C554 PF13435.6 ORF119297 - 0.072 14.0 1.0 16 6.5 0.1 2.3 1 1 1 2 2 2 0 Cytochrome c554 and c-prime Cytochrom_c3_2 PF14537.6 ORF119297 - 0.097 13.1 0.7 0.91 10.0 1.0 2.1 1 1 0 1 1 1 0 Cytochrome c3 PSCyt1 PF07635.11 ORF119297 - 0.19 12.4 1.0 20 5.8 0.0 3.0 3 0 0 3 3 3 0 Planctomycete cytochrome C WRC PF08879.10 ORF119169 - 0.15 11.8 7.8 0.15 11.7 1.0 2.4 2 0 0 2 2 2 0 WRC FLYWCH PF04500.16 ORF119169 - 4.7 7.4 6.6 0.93 9.7 2.7 1.8 2 0 0 2 2 2 0 FLYWCH zinc finger domain CobW_C PF07683.14 ORF117599 - 1.4e-19 69.8 0.7 5.7e-19 67.8 0.7 1.8 1 1 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain UQ_con PF00179.26 ORF116783 - 8.1e-52 174.6 0.0 9.2e-52 174.4 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF116783 - 8.3e-05 22.3 0.0 0.00015 21.5 0.0 1.5 1 1 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 ORF116783 - 0.013 15.3 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 UEV domain RWD PF05773.22 ORF116783 - 0.036 14.3 0.0 0.054 13.8 0.0 1.3 1 0 0 1 1 1 0 RWD domain RIO1 PF01163.22 ORF116545 - 0.048 13.3 0.0 0.06 13.0 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Pkinase PF00069.25 ORF116545 - 0.12 11.7 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain ATP-gua_Ptrans PF00217.19 ORF11467 - 0.001 18.6 0.0 0.0012 18.3 0.0 1.1 1 0 0 1 1 1 1 ATP:guanido phosphotransferase, C-terminal catalytic domain Dpy-30 PF05186.13 ORF11467 - 0.069 12.9 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Dpy-30 motif Peptidase_S13 PF02113.15 ORF11467 - 0.14 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 D-Ala-D-Ala carboxypeptidase 3 (S13) family SPAN-X PF07458.12 ORF114498 - 0.055 13.9 0.3 0.15 12.5 0.0 1.7 2 0 0 2 2 2 0 Sperm protein associated with nucleus, mapped to X chromosome MFS_1 PF07690.16 ORF11088 - 3.9e-14 52.4 12.9 4.3e-14 52.2 12.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MadM PF03818.13 ORF11088 - 0.026 14.4 0.5 0.026 14.4 0.5 2.1 2 0 0 2 2 2 0 Malonate/sodium symporter MadM subunit PsbJ PF01788.17 ORF11088 - 3.2 7.7 11.4 0.29 11.0 0.6 3.0 4 0 0 4 4 4 0 PsbJ Toxin_8 PF07365.12 ORF108009 - 0.41 10.9 0.1 0.41 10.9 0.1 2.2 2 1 0 2 2 2 0 Alpha conotoxin precursor DUF1488 PF07369.11 ORF108009 - 1.1 9.3 6.4 5 7.2 0.3 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1488) LIM_bind PF01803.16 ORF107931 - 0.026 14.1 0.4 0.037 13.6 0.3 1.3 1 1 0 1 1 1 0 LIM-domain binding protein DUF2201_N PF13203.6 ORF107931 - 0.081 12.5 1.4 0.089 12.4 1.4 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain DUF3275 PF11679.8 ORF107931 - 0.19 11.7 1.9 0.3 11.0 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) DUF2608 PF11019.8 ORF105069 - 0.12 11.9 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2608) MIG-14_Wnt-bd PF06664.12 ORF105025 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF105025 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF105025 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF105025 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF105025 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF105025 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF105025 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF105025 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF105025 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF105025 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF105025 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF105025 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF105025 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Chloroa_b-bind PF00504.21 ORF104158 - 1.3e-26 94.1 0.0 1.5e-26 93.9 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein MIG-14_Wnt-bd PF06664.12 ORF103412 - 0.0013 18.0 2.2 0.0016 17.7 2.2 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion MFS_1 PF07690.16 ORF103412 - 0.0016 17.5 0.4 0.0017 17.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TRAP-gamma PF07074.12 ORF103412 - 0.0031 17.1 0.3 0.004 16.7 0.3 1.2 1 0 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) Acyl_transf_3 PF01757.22 ORF103412 - 0.0052 15.9 3.9 0.006 15.7 3.9 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF2254 PF10011.9 ORF103412 - 0.0064 15.4 0.0 0.0068 15.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) UPF0242 PF06785.11 ORF103412 - 0.0092 16.1 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus FA_desaturase PF00487.24 ORF103412 - 0.014 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF4131 PF13567.6 ORF103412 - 0.071 12.8 0.0 0.09 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phage_holin_3_6 PF07332.11 ORF103412 - 0.082 12.9 0.9 0.12 12.4 0.9 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2975 PF11188.8 ORF103412 - 0.09 12.7 3.5 0.12 12.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1003 PF06210.11 ORF103412 - 0.72 10.0 4.7 1.6 8.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ABC2_membrane_3 PF12698.7 ORF103412 - 3.6 6.6 12.9 4.7 6.2 12.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF103412 - 5.2 5.7 8.6 5 5.8 8.3 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) PSI_PsaJ PF01701.18 ORF101641 - 0.0021 18.5 0.1 0.0041 17.6 0.1 1.6 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ YwiC PF14256.6 ORF100673 - 1.8 8.9 8.2 0.3 11.4 4.3 1.7 1 1 1 2 2 2 0 YwiC-like protein Toxin_38 PF14866.6 ORF100091 - 1.6 9.1 8.6 1.1 9.6 0.2 2.3 1 1 1 2 2 2 0 Potassium channel toxin FYVE_2 PF02318.16 NODE_43403_length_463_cov_1.640187_g35723_i0reverse_frame_1 - 9 6.5 11.9 9 6.5 9.1 2.1 1 1 1 2 2 2 0 FYVE-type zinc finger DUF3332 PF11810.8 NODE_43381_length_463_cov_62.299065_g35701_i0forward_frame_1 - 0.012 15.3 0.1 0.023 14.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks162.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks162.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks162.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks162.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:11:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PD-C2-AF1 PF09310.10 NODE_43362_length_463_cov_151.810748_g35683_i0forward_frame_1 - 0.17 11.3 1.4 0.2 11.0 1.4 1.1 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 Herpes_TK_C PF08465.10 NODE_43356_length_463_cov_235.689252_g35678_i0forward_frame_1 - 0.043 13.6 0.1 0.11 12.3 0.1 1.6 1 0 0 1 1 1 0 Thymidine kinase from Herpesvirus C-terminal DUF282 PF03380.14 NODE_43351_length_463_cov_542.988318_g35673_i0reverse_frame_1 - 0.041 13.8 0.1 0.1 12.5 0.1 1.6 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF282 DUF1719 PF08224.11 NODE_43344_length_463_cov_916.579439_g35666_i0reverse_frame_1 - 0.28 10.2 1.3 0.34 10.0 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) FNIP PF05725.12 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_1 - 1.7e-19 69.7 8.4 1.4e-09 38.0 2.2 2.2 2 0 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_1 - 0.006 16.6 0.2 0.011 15.7 0.2 1.4 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) DUF2922 PF11148.8 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_1 - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2922) LRR_11 PF18831.1 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_1 - 2 8.1 14.4 5.1 6.8 0.7 3.7 3 0 0 3 3 3 0 Leucine-rich repeat SO_alpha_A3 PF17806.1 NODE_43333_length_464_cov_2.030303_g35656_i0forward_frame_1 - 0.11 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Sarcosine oxidase A3 domain DpnI_C PF17726.1 NODE_43333_length_464_cov_2.030303_g35656_i0forward_frame_1 - 0.47 10.6 3.4 0.55 10.4 0.1 2.4 2 1 0 2 2 2 0 Dam-replacing HTH domain Put_DNA-bind_N PF06971.13 NODE_43330_length_464_cov_2.953380_g35653_i0reverse_frame_1 - 0.16 12.0 0.9 0.78 9.8 0.0 2.3 3 0 0 3 3 3 0 Putative DNA-binding protein N-terminus DUF5528 PF17666.1 NODE_43329_length_464_cov_3.123543_g35652_i0reverse_frame_1 - 1.2 9.0 3.8 0.22 11.5 0.2 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5528) Phage_P2_GpE PF06528.12 NODE_43329_length_464_cov_3.123543_g35652_i0forward_frame_1 - 0.17 11.5 3.9 1.1 8.8 1.1 2.6 2 0 0 2 2 2 0 Phage P2 GpE DUF4236 PF14020.6 NODE_43322_length_464_cov_3.685315_g35645_i0forward_frame_1 - 0.14 12.7 0.4 0.25 11.9 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4236) Toxin_3 PF00537.18 NODE_43313_length_464_cov_85.515152_g35636_i0reverse_frame_1 - 7.9 6.8 12.3 0.38 11.0 4.2 2.2 2 0 0 2 2 2 0 Scorpion toxin-like domain SWIM PF04434.17 NODE_43298_length_464_cov_196.972028_g35621_i0reverse_frame_1 - 0.12 12.0 0.3 0.12 12.0 0.3 2.0 2 0 0 2 2 2 0 SWIM zinc finger m_DGTX_Dc1a_b_c PF17491.2 NODE_43295_length_464_cov_1278.389277_g35618_i0forward_frame_1 - 0.61 10.8 2.8 1.6 9.4 1.6 1.9 2 0 0 2 2 2 0 Spider Toxins mu-diguetoxin-1 a, b and c Pox_G9-A16 PF03003.16 NODE_43280_length_465_cov_2.369767_g35607_i0forward_frame_1 - 0.0051 16.5 3.6 0.0087 15.8 3.6 1.4 1 0 0 1 1 1 1 Pox virus entry-fusion-complex G9/A16 CC2-LZ PF16516.5 NODE_43265_length_465_cov_6.088372_g35592_i0forward_frame_1 - 0.0061 16.9 0.3 0.0061 16.9 0.3 1.9 2 0 0 2 2 2 1 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF1067 PF06362.11 NODE_43265_length_465_cov_6.088372_g35592_i0forward_frame_1 - 0.063 14.1 0.2 0.095 13.5 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1067) Pkinase PF00069.25 NODE_43263_length_465_cov_24.902326_g35591_i0reverse_frame_1 - 3.6e-10 39.6 0.1 8.1e-10 38.5 0.1 1.6 1 1 0 1 1 1 1 Protein kinase domain WRKY PF03106.15 NODE_43243_length_465_cov_133.690698_g35571_i0forward_frame_1 - 0.092 13.0 0.5 0.092 13.0 0.5 1.8 2 0 0 2 2 2 0 WRKY DNA -binding domain Tfb4 PF03850.14 NODE_43233_length_465_cov_258.674419_g35562_i0forward_frame_1 - 0.04 13.4 0.2 0.055 13.0 0.2 1.2 1 0 0 1 1 1 0 Transcription factor Tfb4 Aldedh PF00171.22 NODE_43215_length_466_cov_1.624130_g35550_i0reverse_frame_2 - 1.3e-54 185.5 0.1 1.4e-54 185.4 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family MHB PF16525.5 NODE_43215_length_466_cov_1.624130_g35550_i0reverse_frame_2 - 0.16 12.2 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 Haemophore, haem-binding QueH PF02677.14 NODE_43211_length_466_cov_1.953596_g35546_i0forward_frame_3 - 0.002 18.3 0.2 0.0026 17.9 0.2 1.2 1 0 0 1 1 1 1 Epoxyqueuosine reductase QueH Phage_TAC_10 PF10963.8 NODE_43211_length_466_cov_1.953596_g35546_i0forward_frame_2 - 0.059 13.6 0.4 0.16 12.2 0.4 1.7 1 0 0 1 1 1 0 Phage tail assembly chaperone DUF948 PF06103.11 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.0023 18.2 0.3 0.0023 18.2 0.3 1.8 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) HALZ PF02183.18 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.0088 16.2 0.1 0.017 15.4 0.1 1.5 1 0 0 1 1 1 1 Homeobox associated leucine zipper CCD PF07860.11 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.052 13.6 2.5 0.072 13.1 2.5 1.2 1 0 0 1 1 1 0 WisP family C-Terminal Region bZIP_1 PF00170.21 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.052 13.7 0.3 0.052 13.7 0.3 2.2 2 0 0 2 2 2 0 bZIP transcription factor Cnn_1N PF07989.11 NODE_43210_length_466_cov_2.111369_g35545_i0reverse_frame_2 - 0.38 11.0 4.3 0.16 12.2 0.8 2.0 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 CAF-1_p150 PF11600.8 NODE_43207_length_466_cov_2.225058_g35542_i0reverse_frame_3 - 1.2 8.8 20.7 1.5 8.5 11.6 2.1 2 0 0 2 2 2 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal OrfB_IS605 PF01385.19 NODE_43207_length_466_cov_2.225058_g35542_i0reverse_frame_3 - 7.6 6.8 12.7 0.2 11.9 0.8 2.5 1 1 1 2 2 2 0 Probable transposase zf-RING_2 PF13639.6 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 5.5e-08 33.0 7.6 8.2e-08 32.5 7.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 7.5e-07 28.8 4.4 7.5e-07 28.8 4.4 1.7 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 1e-05 25.7 6.8 1.7e-05 25.0 6.8 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 3.8e-05 23.5 7.0 6.3e-05 22.8 7.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.00018 21.5 2.2 0.00018 21.5 2.2 1.6 1 1 0 1 1 1 1 RING-type zinc-finger FANCL_C PF11793.8 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.00096 19.3 6.9 0.0028 17.8 6.9 1.8 1 1 0 1 1 1 1 FANCL C-terminal domain zf-RING_5 PF14634.6 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.0013 18.7 6.0 0.002 18.0 6.0 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.005 16.4 4.7 0.012 15.3 4.8 1.6 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type DSBA PF01323.20 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.04 13.7 0.0 0.047 13.5 0.0 1.3 1 0 0 1 1 1 0 DSBA-like thioredoxin domain zf-ANAPC11 PF12861.7 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.056 13.5 2.8 0.13 12.4 2.8 1.6 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Thioredoxin_4 PF13462.6 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.062 13.4 0.2 0.1 12.7 0.2 1.5 1 1 0 1 1 1 0 Thioredoxin zf-C3HC4_2 PF13923.6 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.069 13.0 8.1 0.17 11.7 8.1 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.071 13.0 3.0 0.098 12.5 3.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.086 12.7 5.2 0.14 12.1 5.2 1.4 1 0 0 1 1 1 0 PHD-finger zf-RING-like PF08746.11 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.11 12.8 5.0 0.22 11.9 4.8 1.5 1 1 0 1 1 1 0 RING-like domain RINGv PF12906.7 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.15 12.2 4.5 0.24 11.5 4.5 1.4 1 0 0 1 1 1 0 RING-variant domain Prok-RING_1 PF14446.6 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.31 11.0 3.3 1.1 9.3 0.5 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4_4 PF15227.6 NODE_43204_length_466_cov_2.577726_g35539_i0reverse_frame_2 - 0.64 10.2 5.4 1.3 9.2 5.4 1.6 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING TPR_1 PF00515.28 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 5.5e-15 54.5 3.1 0.0009 19.0 0.0 4.1 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 2.3e-13 49.2 0.2 0.0086 16.1 0.0 4.5 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 3.2e-08 33.1 1.2 0.00029 20.5 0.2 3.5 1 1 3 4 4 4 1 TPR repeat TPR_17 PF13431.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 5.1e-07 29.6 1.2 0.75 10.3 0.0 4.1 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 7.9e-07 29.1 0.0 0.04 14.1 0.0 3.0 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 3.9e-06 27.2 0.9 0.09 13.5 0.0 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 7.4e-06 26.5 0.0 0.07 13.8 0.0 3.8 1 1 3 4 4 4 1 Tetratricopeptide repeat PknG_TPR PF16918.5 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 1.5e-05 23.9 0.0 2.9e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase G tetratricopeptide repeat TPR_19 PF14559.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 2.8e-05 24.5 0.1 0.43 11.1 0.0 3.5 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 5.6e-05 23.4 0.2 0.036 14.4 0.1 2.9 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.0006 19.8 8.0 3.4 8.1 0.0 4.8 5 0 0 5 5 5 2 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.0099 15.5 0.0 0.065 12.9 0.0 2.1 2 1 0 2 2 2 1 Bacterial type III secretion protein (HrpB1_HrpK) TPR_14 PF13428.6 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.016 16.0 0.0 93 4.3 0.0 4.0 1 1 4 5 5 5 0 Tetratricopeptide repeat DUF1947 PF09183.10 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.029 14.7 1.8 5.9 7.3 0.0 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF1947) DUF3808 PF10300.9 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.053 12.3 0.1 0.071 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3808) Elf1 PF05129.13 NODE_43203_length_466_cov_2.747100_g35538_i0reverse_frame_3 - 0.16 12.0 0.1 0.28 11.3 0.1 1.4 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like Spo0M PF07070.11 NODE_43201_length_466_cov_2.967517_g35536_i0reverse_frame_2 - 0.23 10.9 0.0 0.31 10.6 0.0 1.1 1 0 0 1 1 1 0 SpoOM protein Radical_SAM_N PF08497.10 NODE_43201_length_466_cov_2.967517_g35536_i0forward_frame_2 - 0.053 12.7 0.0 0.056 12.7 0.0 1.1 1 0 0 1 1 1 0 Radical SAM N-terminal NOPS PF08075.11 NODE_43191_length_466_cov_5.368910_g35526_i0reverse_frame_3 - 0.085 13.0 0.6 18 5.6 0.0 2.4 2 0 0 2 2 2 0 NOPS (NUC059) domain Lustrin_cystein PF14625.6 NODE_43191_length_466_cov_5.368910_g35526_i0reverse_frame_2 - 1.8 9.0 5.5 13 6.2 0.0 3.3 4 0 0 4 4 4 0 Lustrin, cysteine-rich repeated domain Cactin_mid PF10312.9 NODE_43191_length_466_cov_5.368910_g35526_i0forward_frame_3 - 0.045 13.5 0.0 5.3 6.7 0.0 2.0 2 0 0 2 2 2 0 Conserved mid region of cactin Kre28 PF17097.5 NODE_43186_length_466_cov_55.245940_g35521_i0forward_frame_3 - 0.075 12.0 0.2 0.11 11.4 0.2 1.2 1 0 0 1 1 1 0 Spindle pole body component DiS_P_DiS PF06750.13 NODE_43184_length_466_cov_71.874710_g35519_i0forward_frame_3 - 0.1 12.7 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain DUF4051 PF13260.6 NODE_43184_length_466_cov_71.874710_g35519_i0forward_frame_2 - 0.083 12.6 1.7 0.14 11.9 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) CHAD PF05235.14 NODE_43173_length_466_cov_102.222738_g35508_i0forward_frame_3 - 0.064 13.2 0.0 0.079 12.9 0.0 1.1 1 0 0 1 1 1 0 CHAD domain TMEM100 PF16311.5 NODE_43172_length_466_cov_108.278422_g35507_i0reverse_frame_3 - 0.02 14.5 1.0 0.02 14.5 1.0 1.8 2 1 0 2 2 2 0 Transmembrane protein 100 Ribosomal_60s PF00428.19 NODE_43172_length_466_cov_108.278422_g35507_i0reverse_frame_2 - 2.1e-15 57.1 1.8 3.7e-15 56.3 1.8 1.4 1 0 0 1 1 1 1 60s Acidic ribosomal protein HSBP1 PF06825.12 NODE_43171_length_466_cov_119.359629_g35506_i0forward_frame_2 - 0.043 13.7 0.4 0.71 9.8 0.0 2.2 2 0 0 2 2 2 0 Heat shock factor binding protein 1 Med9 PF07544.13 NODE_43171_length_466_cov_119.359629_g35506_i0forward_frame_2 - 0.25 11.5 6.4 2.1 8.5 1.9 2.2 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 ABC_trans_aux PF03886.13 NODE_43165_length_466_cov_176.341067_g35500_i0forward_frame_3 - 0.035 13.7 0.2 0.06 12.9 0.2 1.4 1 0 0 1 1 1 0 ABC-type transport auxiliary lipoprotein component LAB_N PF07578.11 NODE_43146_length_467_cov_1.995370_g35485_i0reverse_frame_3 - 0.083 13.0 0.8 0.15 12.1 0.8 1.5 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain NDUF_B7 PF05676.13 NODE_43145_length_467_cov_2.016204_g35484_i0forward_frame_2 - 0.051 13.3 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) GCS2 PF04107.13 NODE_43142_length_467_cov_2.622685_g35481_i0reverse_frame_2 - 1.7e-17 63.8 0.0 7.6e-17 61.6 0.0 1.8 1 1 1 2 2 2 1 Glutamate-cysteine ligase family 2(GCS2) YafO_toxin PF13957.6 NODE_43142_length_467_cov_2.622685_g35481_i0reverse_frame_2 - 0.066 13.3 0.0 0.11 12.5 0.0 1.4 1 1 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system DUF4931 PF16285.5 NODE_43142_length_467_cov_2.622685_g35481_i0reverse_frame_2 - 0.13 11.5 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4931) FtsK_4TM PF13491.6 NODE_43140_length_467_cov_2.974537_g35479_i0forward_frame_2 - 9.9e-28 97.0 5.7 1.2e-27 96.7 5.7 1.1 1 0 0 1 1 1 1 4TM region of DNA translocase FtsK/SpoIIIE Tetraspanin PF00335.20 NODE_43140_length_467_cov_2.974537_g35479_i0forward_frame_2 - 0.3 10.8 4.3 1.8 8.3 2.2 2.0 2 0 0 2 2 2 0 Tetraspanin family DUF2207 PF09972.9 NODE_43140_length_467_cov_2.974537_g35479_i0forward_frame_2 - 0.34 9.6 0.6 0.38 9.4 0.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3342 PF11822.8 NODE_43137_length_467_cov_3.807870_g35476_i0reverse_frame_2 - 0.1 12.8 0.8 0.66 10.2 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3342) GlyL_C PF12524.8 NODE_43126_length_467_cov_72.942130_g35465_i0reverse_frame_3 - 0.032 14.4 0.1 0.068 13.3 0.1 1.5 1 0 0 1 1 1 0 dsDNA virus glycoprotein L C terminal Pox_A14 PF05767.12 NODE_43126_length_467_cov_72.942130_g35465_i0forward_frame_3 - 0.0071 16.5 0.4 0.012 15.7 0.4 1.4 1 0 0 1 1 1 1 Poxvirus virion envelope protein A14 Sulfate_transp PF00916.20 NODE_43111_length_467_cov_124.344907_g35451_i0forward_frame_3 - 6e-11 41.7 1.2 8.7e-11 41.2 1.2 1.2 1 0 0 1 1 1 1 Sulfate permease family SR-25 PF10500.9 NODE_43110_length_467_cov_126.541667_g35450_i0reverse_frame_3 - 0.18 11.4 12.0 0.25 10.9 12.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HAP PF03866.13 NODE_43110_length_467_cov_126.541667_g35450_i0forward_frame_3 - 0.0038 17.3 0.3 0.006 16.6 0.3 1.4 1 1 0 1 1 1 1 Hydrophobic abundant protein (HAP) Ank_2 PF12796.7 NODE_43109_length_467_cov_132.233796_g35449_i0forward_frame_2 - 1e-19 70.9 0.0 1.5e-13 51.1 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_43109_length_467_cov_132.233796_g35449_i0forward_frame_2 - 7.3e-17 61.5 0.2 9.5e-07 29.3 0.0 2.5 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_43109_length_467_cov_132.233796_g35449_i0forward_frame_2 - 9e-17 60.7 2.0 0.00053 20.3 0.5 3.3 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 NODE_43109_length_467_cov_132.233796_g35449_i0forward_frame_2 - 2.2e-14 53.3 0.8 6.3e-05 23.2 0.0 3.1 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_43109_length_467_cov_132.233796_g35449_i0forward_frame_2 - 4.2e-14 51.3 0.2 9.3e-05 22.6 0.1 3.2 3 0 0 3 3 3 3 Ankyrin repeat CDKN3 PF05706.12 NODE_43109_length_467_cov_132.233796_g35449_i0forward_frame_2 - 0.11 12.2 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) BAF250_C PF12031.8 NODE_43106_length_467_cov_159.236111_g35446_i0reverse_frame_3 - 0.046 13.0 0.3 0.078 12.3 0.3 1.3 1 0 0 1 1 1 0 SWI/SNF-like complex subunit BAF250/Osa Erf4 PF10256.9 NODE_43103_length_467_cov_203.696759_g35443_i0forward_frame_3 - 0.17 12.0 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family NA37 PF04245.13 NODE_43101_length_467_cov_211.490741_g35441_i0reverse_frame_3 - 0.066 12.7 0.0 0.12 11.9 0.0 1.5 1 1 1 2 2 2 0 37-kD nucleoid-associated bacterial protein DUF1768 PF08719.11 NODE_43100_length_467_cov_225.944444_g35440_i0forward_frame_3 - 2.1e-15 57.3 0.0 2.6e-15 57.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) DUF5602 PF18197.1 NODE_43097_length_467_cov_293.127315_g35437_i0reverse_frame_2 - 0.14 12.6 0.1 0.33 11.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5602) SSP160 PF06933.11 NODE_43091_length_467_cov_3219.412037_g35433_i0forward_frame_2 - 0.005 15.1 10.6 0.0058 14.9 10.6 1.0 1 0 0 1 1 1 1 Special lobe-specific silk protein SSP160 DUF5305 PF17231.2 NODE_43091_length_467_cov_3219.412037_g35433_i0forward_frame_2 - 0.082 12.3 0.8 0.1 12.0 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) AJAP1_PANP_C PF15298.6 NODE_43091_length_467_cov_3219.412037_g35433_i0forward_frame_2 - 0.21 11.8 11.4 0.25 11.5 11.4 1.1 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF3357 PF11837.8 NODE_43091_length_467_cov_3219.412037_g35433_i0forward_frame_2 - 0.22 12.0 3.1 0.22 12.0 2.0 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3357) Herpes_PAP PF03325.13 NODE_43085_length_468_cov_2.284065_g35427_i0reverse_frame_3 - 0.0017 18.0 0.1 0.0024 17.5 0.1 1.4 1 0 0 1 1 1 1 Herpesvirus polymerase accessory protein GpcrRhopsn4 PF10192.9 NODE_43085_length_468_cov_2.284065_g35427_i0forward_frame_3 - 5.7e-20 71.8 14.0 6.5e-20 71.6 14.0 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain Frag1 PF10277.9 NODE_43085_length_468_cov_2.284065_g35427_i0forward_frame_3 - 9.8e-05 22.0 9.5 0.00016 21.3 9.4 1.4 1 1 0 1 1 1 1 Frag1/DRAM/Sfk1 family cNMP_binding PF00027.29 NODE_43084_length_468_cov_2.471132_g35426_i0reverse_frame_3 - 1.4e-09 37.9 0.0 1.9e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF3810 PF12725.7 NODE_43082_length_468_cov_2.531178_g35424_i0forward_frame_2 - 3.5 6.9 4.6 5.2 6.3 4.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) STAG PF08514.11 NODE_43080_length_468_cov_2.734411_g35422_i0reverse_frame_3 - 0.55 10.2 2.2 0.96 9.4 2.2 1.4 1 0 0 1 1 1 0 STAG domain Lipin_N PF04571.14 NODE_43080_length_468_cov_2.734411_g35422_i0forward_frame_3 - 1.6e-32 111.5 0.3 2.5e-32 110.9 0.3 1.3 1 0 0 1 1 1 1 lipin, N-terminal conserved region Sporozoite_P67 PF05642.11 NODE_43079_length_468_cov_2.856813_g35421_i0forward_frame_2 - 7.4 4.5 5.9 8.3 4.4 5.9 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Lsm_interact PF05391.11 NODE_43070_length_468_cov_4.099307_g35412_i0forward_frame_2 - 0.48 10.0 0.2 0.48 10.0 0.2 2.0 2 0 0 2 2 2 0 Lsm interaction motif Endostatin PF06482.11 NODE_43069_length_468_cov_4.122402_g35411_i0reverse_frame_2 - 0.22 11.0 1.7 0.32 10.4 1.5 1.4 1 1 0 1 1 1 0 Collagenase NC10 and Endostatin HMG_box PF00505.19 NODE_43065_length_468_cov_5.471132_g35407_i0reverse_frame_3 - 9.2e-15 54.8 6.2 9.2e-15 54.8 6.2 2.0 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_43065_length_468_cov_5.471132_g35407_i0reverse_frame_3 - 8.7e-08 32.6 3.8 2.5e-07 31.2 3.8 1.8 1 0 0 1 1 1 1 HMG-box domain CHDNT PF08073.12 NODE_43065_length_468_cov_5.471132_g35407_i0reverse_frame_3 - 2.3e-05 24.2 0.3 4.6e-05 23.3 0.3 1.5 1 0 0 1 1 1 1 CHDNT (NUC034) domain Ccdc124 PF06244.12 NODE_43065_length_468_cov_5.471132_g35407_i0reverse_frame_3 - 0.0089 16.6 15.0 0.01 16.4 9.6 2.6 1 1 1 2 2 2 1 Coiled-coil domain-containing protein 124 /Oxs1 EZH2_WD-Binding PF11616.8 NODE_43065_length_468_cov_5.471132_g35407_i0reverse_frame_3 - 0.021 14.9 0.9 0.068 13.3 0.9 1.9 1 0 0 1 1 1 0 WD repeat binding protein EZH2 DUF3699 PF12480.8 NODE_43065_length_468_cov_5.471132_g35407_i0reverse_frame_3 - 0.039 14.1 1.0 0.079 13.1 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3699) SpoU_methylase PF00588.19 NODE_43065_length_468_cov_5.471132_g35407_i0reverse_frame_3 - 0.11 12.7 0.2 0.22 11.7 0.1 1.5 1 1 0 1 1 1 0 SpoU rRNA Methylase family Apt1 PF10351.9 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 0.012 14.6 9.2 0.011 14.7 9.2 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain NPR3 PF03666.13 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 0.61 8.8 9.8 0.65 8.7 9.8 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Lin-8 PF03353.15 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 0.74 9.3 3.6 0.98 8.9 3.6 1.2 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Presenilin PF01080.17 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 0.78 8.4 4.9 0.8 8.4 4.9 1.1 1 0 0 1 1 1 0 Presenilin AF-4 PF05110.13 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 2.5 6.1 23.4 2.8 5.9 23.4 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF4692 PF15763.5 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 6.3 7.2 10.3 8.2 6.9 10.3 1.3 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) DUF4834 PF16118.5 NODE_43064_length_468_cov_12.101617_g35406_i0reverse_frame_3 - 9.8 7.2 5.8 16 6.5 5.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Glyco_trans_2_3 PF13632.6 NODE_43064_length_468_cov_12.101617_g35406_i0forward_frame_3 - 3.2 7.6 8.2 4.3 7.2 8.2 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 CAP_N PF01213.19 NODE_43064_length_468_cov_12.101617_g35406_i0forward_frame_2 - 8.8 5.7 16.2 1.9 7.9 1.3 2.2 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) N terminal Hydrophobin_2 PF06766.11 NODE_43057_length_468_cov_65.431871_g28036_i1reverse_frame_2 - 0.002 18.0 0.2 0.0041 17.0 0.2 1.6 1 0 0 1 1 1 1 Fungal hydrophobin UPF0121 PF03661.13 NODE_43055_length_468_cov_70.905312_g35398_i0reverse_frame_3 - 0.12 11.8 0.2 0.15 11.4 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) zf-4CXXC_R1 PF10497.9 NODE_43054_length_468_cov_71.676674_g35397_i0forward_frame_3 - 0.19 12.0 5.2 0.29 11.4 5.2 1.4 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 zf_Rg PF17915.1 NODE_43039_length_468_cov_128.914550_g35382_i0reverse_frame_3 - 0.017 14.5 0.3 0.036 13.5 0.3 1.5 1 0 0 1 1 1 0 Reverse gyrase zinc finger DUF4501 PF14946.6 NODE_43039_length_468_cov_128.914550_g35382_i0forward_frame_3 - 0.028 14.5 0.2 0.046 13.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) KH_7 PF17214.3 NODE_43038_length_468_cov_130.889145_g35381_i0reverse_frame_2 - 0.0024 17.8 0.2 0.0058 16.6 0.0 1.8 2 0 0 2 2 2 1 KH domain DUF815 PF05673.13 NODE_43038_length_468_cov_130.889145_g35381_i0reverse_frame_2 - 0.076 12.2 0.1 0.1 11.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DUF4597 PF15366.6 NODE_43036_length_468_cov_185.175520_g35379_i0forward_frame_3 - 0.019 14.7 0.0 0.056 13.2 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4597) Crisp PF08562.10 NODE_43036_length_468_cov_185.175520_g35379_i0forward_frame_3 - 0.074 13.6 2.5 0.28 11.8 2.6 2.1 1 1 0 1 1 1 0 Crisp LCE6A PF15858.5 NODE_43035_length_468_cov_187.637413_g35378_i0forward_frame_3 - 2.7 8.8 8.9 0.67 10.7 5.1 2.0 1 1 1 2 2 2 0 Late cornified envelope protein 6A family Glyco_hydro2_C5 PF18565.1 NODE_43031_length_468_cov_501.281755_g35374_i0forward_frame_2 - 0.19 11.6 0.0 0.28 11.1 0.0 1.1 1 0 0 1 1 1 0 Glycoside hydrolase family 2 C-terminal domain 5 Cas_TM1802 PF09484.10 NODE_43028_length_468_cov_2438.466513_g34665_i2forward_frame_2 - 0.25 10.0 0.1 0.32 9.7 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) zf-RING_2 PF13639.6 ORF98916 - 2e-09 37.6 20.6 8.4e-08 32.4 20.6 2.8 1 1 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF98916 - 7e-09 35.3 3.4 1.4e-08 34.3 3.4 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF98916 - 1.4e-06 28.0 1.4 1.4e-06 28.0 1.4 2.5 2 1 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF98916 - 5e-06 26.4 2.0 5e-06 26.4 2.0 2.0 2 1 0 2 2 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF98916 - 0.00014 21.8 10.9 0.00094 19.2 10.9 2.2 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 ORF98916 - 0.00046 20.4 17.3 0.0044 17.3 17.3 2.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF98916 - 0.0032 17.3 14.8 0.054 13.4 14.9 2.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-HC5HC2H_2 PF13832.6 ORF98916 - 0.0082 16.3 1.5 0.0082 16.3 1.5 1.6 1 1 0 1 1 1 1 PHD-zinc-finger like domain Baculo_RING PF05883.11 ORF98916 - 0.029 14.4 0.8 0.041 13.9 0.8 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-RING_5 PF14634.6 ORF98916 - 0.034 14.1 13.3 0.24 11.4 13.3 2.3 1 1 0 1 1 1 0 zinc-RING finger domain RINGv PF12906.7 ORF98916 - 0.042 14.0 9.4 0.055 13.6 8.1 2.0 1 1 0 1 1 1 0 RING-variant domain FANCL_C PF11793.8 ORF98916 - 0.047 13.9 13.9 1.4 9.1 13.9 2.6 1 1 0 1 1 1 0 FANCL C-terminal domain zf-Nse PF11789.8 ORF98916 - 0.29 11.0 4.9 0.54 10.1 4.9 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_ribbon_17 PF17120.5 ORF98916 - 0.8 9.4 12.8 2.3 7.9 12.8 1.9 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF98916 - 4.8 7.1 15.4 38 4.3 15.4 2.5 1 1 0 1 1 1 0 PHD-finger Asp_Glu_race PF01177.22 ORF98466 - 0.038 13.8 0.1 0.045 13.6 0.1 1.2 1 0 0 1 1 1 0 Asp/Glu/Hydantoin racemase RRF PF01765.19 ORF98289 - 0.25 11.3 11.6 0.36 10.8 11.6 1.2 1 0 0 1 1 1 0 Ribosome recycling factor COQ7 PF03232.13 ORF98289 - 0.78 9.5 2.9 0.32 10.8 0.8 1.4 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 Peptidase_C37 PF05416.12 ORF98289 - 1.4 7.3 8.3 1.5 7.3 8.3 1.0 1 0 0 1 1 1 0 Southampton virus-type processing peptidase DUF4337 PF14235.6 ORF98289 - 4.2 7.5 9.1 6.3 6.9 9.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF3592 PF12158.8 ORF97681 - 0.05 13.7 0.6 0.28 11.2 0.6 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3592) CEP44 PF15007.6 ORF96745 - 2.6e-33 114.9 1.3 3.3e-33 114.6 1.3 1.1 1 0 0 1 1 1 1 Centrosomal spindle body, CEP44 UPF0688 PF15772.5 ORF96583 - 3.2 7.9 7.9 0.6 10.3 4.5 1.5 2 0 0 2 2 2 0 UPF0688 family TMEM107 PF14995.6 ORF95942 - 2.4e-19 70.0 10.1 2.8e-19 69.8 10.1 1.0 1 0 0 1 1 1 1 Transmembrane protein DUF1772 PF08592.11 ORF95942 - 0.0092 16.3 0.5 0.032 14.5 0.1 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF1772) DUF3671 PF12420.8 ORF95942 - 1.1 9.3 6.3 2.9 8.0 6.3 1.7 1 1 0 1 1 1 0 Protein of unknown function DHHC PF01529.20 ORF95942 - 6.8 6.8 9.9 6.7 6.8 8.7 1.6 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF16 PF01519.16 ORF95068 - 0.023 15.2 10.6 0.053 14.0 10.5 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 CENP-Q PF13094.6 ORF95068 - 0.42 10.8 10.1 1.4 9.1 2.9 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Fib_alpha PF08702.10 ORF95068 - 5.2 7.3 11.6 1.3 9.2 0.4 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Rad50_zn_hook PF04423.14 ORF95068 - 7.2 6.5 11.5 25 4.8 0.3 3.8 3 0 0 3 3 3 0 Rad50 zinc hook motif Totivirus_coat PF05518.11 ORF94704 - 2.2 6.2 3.8 2.5 6.0 3.8 1.0 1 0 0 1 1 1 0 Totivirus coat protein zf-trcl PF13451.6 ORF94704 - 3.4 7.6 5.4 6.4 6.8 5.4 1.4 1 0 0 1 1 1 0 Probable zinc-ribbon domain ApoLp-III PF07464.11 ORF92382 - 0.0008 19.5 0.9 0.14 12.2 0.0 2.1 2 0 0 2 2 2 2 Apolipophorin-III precursor (apoLp-III) DUF3489 PF11994.8 ORF92382 - 0.087 12.9 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) DUF5082 PF16888.5 ORF92382 - 0.21 11.9 4.5 0.17 12.2 0.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) Tenui_NCP PF04876.12 ORF91611 - 0.2 11.2 0.0 0.28 10.7 0.0 1.2 1 0 0 1 1 1 0 Tenuivirus major non-capsid protein Ank_4 PF13637.6 ORF90193 - 9.5e-13 48.4 4.4 1.7e-07 31.7 0.4 2.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF90193 - 4.4e-10 39.6 1.8 8.5e-07 29.1 0.3 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF90193 - 6.1e-08 33.1 0.0 8.9e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF90193 - 1.3e-05 25.2 0.2 0.2 12.3 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 ORF90193 - 0.00019 21.7 1.2 0.54 10.8 0.1 2.6 2 0 0 2 2 2 2 Ankyrin repeat USP7_C2 PF14533.6 ORF89644 - 0.099 12.3 0.0 0.41 10.3 0.0 1.8 1 1 0 1 1 1 0 Ubiquitin-specific protease C-terminal Dexa_ind PF15198.6 ORF89221 - 0.26 11.4 1.9 0.46 10.6 1.9 1.4 1 0 0 1 1 1 0 Dexamethasone-induced Asp PF00026.23 ORF8829 - 4.2e-11 42.8 0.1 5.3e-11 42.5 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF8829 - 0.00014 21.7 0.0 0.00018 21.3 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal DUF772 PF05598.11 ORF86411 - 0.034 14.2 0.3 0.051 13.6 0.3 1.3 1 0 0 1 1 1 0 Transposase domain (DUF772) DUF975 PF06161.11 ORF84967 - 0.02 14.7 2.1 0.023 14.5 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF975) DUF4401 PF14351.6 ORF84967 - 0.091 12.1 2.7 0.11 11.7 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4401) DUF4064 PF13273.6 ORF84967 - 0.12 12.7 4.7 0.18 12.1 4.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) EbsA PF17255.2 ORF84967 - 0.28 11.5 5.0 0.4 11.0 5.0 1.2 1 0 0 1 1 1 0 EbsA-like protein Ac81 PF05820.11 ORF84967 - 0.42 10.2 5.6 0.59 9.7 5.6 1.2 1 0 0 1 1 1 0 Baculoviridae AC81 SUR7 PF06687.12 ORF84967 - 0.76 9.4 4.5 1 8.9 4.5 1.1 1 0 0 1 1 1 0 SUR7/PalI family DUF3043 PF11241.8 ORF84967 - 3.5 7.6 4.3 5.4 7.0 4.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) F-box PF00646.33 ORF84695 - 3.9 7.5 6.9 14 5.7 0.2 2.8 3 0 0 3 3 3 0 F-box domain zf_CCCH_4 PF18345.1 ORF84130 - 0.026 14.6 0.1 0.097 12.8 0.1 2.1 1 0 0 1 1 1 0 Zinc finger domain NEMO PF11577.8 ORF83823 - 0.0018 18.3 0.8 0.0018 18.3 0.8 2.0 2 0 0 2 2 2 1 NF-kappa-B essential modulator NEMO partial_CstF PF15861.5 ORF83823 - 0.013 15.3 6.2 0.07 12.9 0.9 2.4 2 0 0 2 2 2 0 Partial cleavage stimulation factor domain BST2 PF16716.5 ORF83823 - 0.058 14.0 3.3 0.058 14.0 3.3 1.8 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 TolA_bind_tri PF16331.5 ORF83823 - 0.15 12.2 7.6 0.12 12.5 3.8 2.1 2 0 0 2 2 2 0 TolA binding protein trimerisation DUF4140 PF13600.6 ORF83823 - 0.96 9.9 4.1 1.8 9.0 0.7 2.1 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF5094 PF17015.5 ORF83823 - 4 7.5 13.0 1.2 9.2 8.5 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF5094) DivIC PF04977.15 ORF83823 - 9.8 6.0 13.0 0.86 9.4 6.5 2.0 2 0 0 2 2 2 0 Septum formation initiator PPPI_inhib PF14895.6 ORF83753 - 0.093 11.9 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein phosphatase 1 inhibitor CheC PF04509.12 ORF83095 - 0.045 13.7 0.1 0.16 11.9 0.0 1.9 2 0 0 2 2 2 0 CheC-like family RseC_MucC PF04246.12 ORF8300 - 2 8.3 4.8 1.3 9.0 1.2 2.0 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF4726 PF15855.5 ORF82773 - 0.19 11.9 0.2 0.58 10.4 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4726) PAN_3 PF08277.12 ORF8257 - 0.49 10.2 6.5 0.14 11.9 3.3 1.8 2 0 0 2 2 2 0 PAN-like domain Ndc1_Nup PF09531.10 ORF8257 - 1.3 7.6 11.5 1.4 7.5 11.5 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF4726 PF15855.5 ORF80220 - 0.19 11.9 0.2 0.58 10.4 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4726) DUF4689 PF15755.5 ORF80108 - 1.6 8.3 3.5 2.4 7.7 3.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4689) MadL PF03817.13 ORF80085 - 0.063 13.3 0.0 0.09 12.8 0.0 1.2 1 0 0 1 1 1 0 Malonate transporter MadL subunit Ogr_Delta PF04606.12 ORF77546 - 0.00027 20.8 1.1 0.00027 20.8 1.1 2.5 2 0 0 2 2 2 1 Ogr/Delta-like zinc finger Elf1 PF05129.13 ORF77546 - 5.1 7.2 7.3 3.7 7.7 2.2 2.2 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like NifU_N PF01592.16 ORF77092 - 1.4e-54 183.6 0.6 1.7e-54 183.4 0.6 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain DUF726 PF05277.12 ORF75916 - 8.7e-27 93.9 0.9 4.3e-24 85.1 0.9 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF726) UPF0565 PF10561.9 ORF75916 - 0.045 13.0 0.1 0.066 12.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Gelsolin PF00626.22 ORF72388 - 6.6e-08 32.3 0.2 3e-07 30.2 0.1 2.1 2 1 0 2 2 2 1 Gelsolin repeat CTP_transf_like PF01467.26 ORF72022 - 0.0075 16.5 2.5 0.0095 16.1 2.2 1.3 1 1 0 1 1 1 1 Cytidylyltransferase-like PDZ_2 PF13180.6 ORF72022 - 0.084 13.2 0.9 0.24 11.7 0.3 2.0 1 1 1 2 2 2 0 PDZ domain DUF86 PF01934.17 ORF72022 - 0.15 12.0 3.6 0.097 12.5 1.2 2.0 2 1 0 2 2 2 0 Protein of unknown function DUF86 ApoA-II PF04711.13 ORF72022 - 0.55 10.4 7.1 0.4 10.9 4.3 2.0 1 1 1 2 2 2 0 Apolipoprotein A-II (ApoA-II) TB2_DP1_HVA22 PF03134.19 ORF71145 - 3.8e-26 90.8 4.4 6e-26 90.2 4.4 1.3 1 0 0 1 1 1 1 TB2/DP1, HVA22 family Virul_fac_BrkB PF03631.15 ORF71145 - 0.13 11.8 9.0 0.28 10.8 9.0 1.5 1 1 0 1 1 1 0 Virulence factor BrkB KdpA PF03814.15 ORF71117 - 1e-58 198.9 7.6 1.1e-58 198.7 7.6 1.0 1 0 0 1 1 1 1 Potassium-transporting ATPase A subunit Ras PF00071.22 ORF64758 - 8.5e-41 139.3 0.0 9.7e-41 139.1 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF64758 - 1.5e-24 86.5 0.0 1.9e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF64758 - 5.4e-12 45.5 0.0 6.7e-12 45.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF64758 - 0.0089 15.4 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF64758 - 0.015 14.9 0.0 0.026 14.0 0.0 1.5 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF64758 - 0.096 12.6 0.0 1.2 9.0 0.0 2.1 2 0 0 2 2 2 0 RsgA GTPase DDT PF02791.17 ORF64615 - 0.13 12.6 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 DDT domain Vif PF00559.17 ORF63568 - 0.0042 16.8 0.7 0.0055 16.4 0.7 1.1 1 0 0 1 1 1 1 Retroviral Vif (Viral infectivity) protein Prefoldin PF02996.17 ORF62538 - 4.5e-26 91.1 1.6 6.1e-26 90.7 1.6 1.2 1 0 0 1 1 1 1 Prefoldin subunit UPF0449 PF15136.6 ORF62538 - 0.065 13.7 1.9 5.8 7.5 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0449 GIT_CC PF16559.5 ORF62538 - 0.25 11.2 9.3 0.32 10.9 5.0 2.3 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor WXG100 PF06013.12 ORF62538 - 0.27 11.5 5.3 12 6.2 0.0 2.8 2 1 1 3 3 3 0 Proteins of 100 residues with WXG Dsh_C PF12316.8 ORF61684 - 0.026 15.0 2.1 0.031 14.7 2.1 1.1 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal NikR_C PF08753.11 ORF60571 - 9.9e-28 96.1 6.1 1.5e-27 95.5 6.1 1.3 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 ORF60571 - 1.5e-11 43.8 0.8 2.3e-11 43.2 0.8 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 ORF60571 - 0.02 15.1 0.2 0.027 14.6 0.2 1.3 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family RHH_3 PF12651.7 ORF60571 - 0.092 12.7 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Ribbon-helix-helix domain RHH_5 PF07878.11 ORF60571 - 0.16 11.9 0.1 0.53 10.2 0.0 2.0 2 0 0 2 2 2 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 DUF1887 PF09002.11 ORF58567 - 0.26 9.9 0.0 0.3 9.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) DUF2325 PF10087.9 ORF56657 - 0.2 11.8 2.5 0.16 12.1 0.6 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) ABA_WDS PF02496.16 ORF55995 - 2e-07 31.4 5.0 0.00057 20.3 0.1 2.7 1 1 2 3 3 3 2 ABA/WDS induced protein Pex14_N PF04695.13 ORF55995 - 7.4 7.2 7.6 10 6.8 7.4 1.4 1 1 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region F-box-like PF12937.7 ORF55931 - 0.0085 16.0 3.7 0.017 15.0 3.7 1.5 1 0 0 1 1 1 1 F-box-like DUF3439 PF11921.8 ORF55931 - 0.086 12.8 2.0 0.13 12.2 2.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Orf78 PF06024.12 ORF51845 - 0.65 10.3 3.0 3 8.2 3.0 2.0 1 1 0 1 1 1 0 Orf78 (ac78) Trans_reg_C PF00486.28 ORF50968 - 4.6e-22 77.9 0.3 3e-21 75.3 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Aminotran_3 PF00202.21 ORF50968 - 0.093 11.4 0.0 0.11 11.2 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-III DUF1887 PF09002.11 ORF50814 - 0.1 11.2 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) DUF16 PF01519.16 ORF50031 - 0.023 15.2 10.6 0.053 14.0 10.5 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 CENP-Q PF13094.6 ORF50031 - 0.42 10.8 10.1 1.4 9.1 2.9 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Fib_alpha PF08702.10 ORF50031 - 5.2 7.3 11.6 1.3 9.2 0.4 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Rad50_zn_hook PF04423.14 ORF50031 - 7.2 6.5 11.5 25 4.8 0.3 3.8 3 0 0 3 3 3 0 Rad50 zinc hook motif DUF386 PF04074.12 ORF47920 - 1.4e-42 145.1 0.0 1.5e-42 145.0 0.0 1.0 1 0 0 1 1 1 1 YhcH/YjgK/YiaL DUF1889 PF08986.10 ORF47920 - 0.059 13.8 0.0 0.09 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) DDT PF02791.17 ORF46102 - 0.13 12.6 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 DDT domain Peptidase_C7 PF01830.18 ORF45234 - 0.23 10.8 2.4 0.27 10.7 1.7 1.3 1 1 0 1 1 1 0 Peptidase C7 family DUF3624 PF12292.8 ORF45154 - 0.0023 18.3 4.3 0.0058 17.0 4.3 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3624) PTPS_related PF10131.9 ORF45154 - 0.045 12.1 8.6 0.048 12.0 8.6 1.1 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein E7 PF00527.18 ORF45154 - 1.1 9.5 4.1 2.7 8.2 4.1 1.6 1 1 0 1 1 1 0 E7 protein, Early protein DUF4418 PF14387.6 ORF45154 - 1.5 9.0 13.7 0.21 11.8 8.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4418) TrbC PF04956.13 ORF44987 - 0.043 14.0 1.0 0.043 14.0 1.0 2.2 1 1 1 2 2 2 0 TrbC/VIRB2 family DUF1176 PF06674.11 ORF44987 - 0.088 12.2 1.7 0.1 12.0 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1176) Tape_meas_lam_C PF09718.10 ORF44987 - 0.5 10.5 8.3 0.076 13.1 3.5 1.9 2 0 0 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) CBFD_NFYB_HMF PF00808.23 ORF44048 - 9.7e-09 35.4 2.1 1.9e-08 34.5 0.1 2.3 2 1 1 3 3 3 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAFII28 PF04719.14 ORF44048 - 0.016 15.3 0.1 0.027 14.5 0.1 1.5 1 1 0 1 1 1 0 hTAFII28-like protein conserved region DUF4726 PF15855.5 ORF42198 - 0.19 11.9 0.2 0.58 10.4 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4726) DUF1117 PF06547.12 ORF42162 - 0.12 12.9 0.6 0.53 10.9 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1117) ApoLp-III PF07464.11 ORF41522 - 0.0008 19.5 0.9 0.14 12.2 0.0 2.1 2 0 0 2 2 2 2 Apolipophorin-III precursor (apoLp-III) DUF3489 PF11994.8 ORF41522 - 0.087 12.9 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) DUF5082 PF16888.5 ORF41522 - 0.21 11.9 4.5 0.17 12.2 0.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) YodL PF14191.6 ORF41127 - 0.0081 17.0 1.0 0.017 16.0 0.7 1.7 1 1 1 2 2 2 1 YodL-like DUF5371 PF17341.2 ORF40668 - 0.032 14.4 0.1 0.064 13.5 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5371) Peptidase_C7 PF01830.18 ORF40001 - 0.23 10.8 2.4 0.27 10.7 1.7 1.3 1 1 0 1 1 1 0 Peptidase C7 family Response_reg PF00072.24 ORF37259 - 3.8e-24 85.0 0.2 4.4e-24 84.8 0.2 1.1 1 0 0 1 1 1 1 Response regulator receiver domain HnRNP_M PF11532.8 ORF37259 - 0.056 13.7 0.1 0.13 12.5 0.1 1.6 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein M PCNA_N PF00705.18 ORF37259 - 0.083 12.6 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 Proliferating cell nuclear antigen, N-terminal domain SNARE_assoc PF09335.11 ORF36549 - 2.1e-09 37.9 2.4 2.1e-09 37.9 2.4 1.4 2 0 0 2 2 2 1 SNARE associated Golgi protein DUF1887 PF09002.11 ORF34221 - 0.1 11.2 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) TPR_19 PF14559.6 ORF31362 - 1.2e-07 32.1 1.0 1.2e-07 32.1 1.0 2.8 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF31362 - 5.2e-05 23.0 5.7 0.66 10.2 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF31362 - 0.00034 20.3 0.1 1 9.3 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF31362 - 0.0054 17.4 7.5 0.0054 17.4 7.5 2.1 2 1 0 2 2 2 1 Tetratricopeptide repeat ATG16 PF08614.11 ORF31362 - 0.043 14.1 3.5 0.071 13.3 3.5 1.4 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Fis1_TPR_C PF14853.6 ORF31362 - 0.067 13.3 0.1 7 6.8 0.1 2.6 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_4 PF07721.14 ORF31362 - 0.073 13.7 1.6 0.073 13.7 1.6 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF31362 - 0.085 13.7 13.3 0.41 11.6 2.9 3.4 2 1 1 3 3 3 0 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 ORF31362 - 0.12 12.8 0.3 0.2 12.1 0.2 1.5 1 1 0 1 1 1 0 Alkyl sulfatase dimerisation TPR_12 PF13424.6 ORF31362 - 0.12 12.6 6.6 0.14 12.4 2.0 2.9 1 1 3 4 4 4 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF31362 - 0.19 12.2 1.2 9.6 6.8 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF31362 - 0.24 11.6 11.1 0.075 13.2 6.8 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF31362 - 3.4 8.1 10.3 0.23 11.8 1.8 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat Mito_carr PF00153.27 ORF29732 - 1.9e-13 50.1 0.1 2.6e-13 49.7 0.1 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein EF-hand_7 PF13499.6 ORF29234 - 2.1e-08 34.5 3.2 4.1e-05 23.9 2.2 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF29234 - 4.6e-05 23.2 2.0 0.0084 15.9 2.1 2.7 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF29234 - 0.00072 18.9 3.5 0.0055 16.2 0.7 3.2 3 0 0 3 3 3 1 EF hand DUF2711 PF10924.8 ORF29234 - 0.025 14.2 0.2 0.03 13.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2711) EF-hand_6 PF13405.6 ORF29234 - 0.04 13.8 0.2 0.04 13.8 0.2 2.9 4 0 0 4 4 4 0 EF-hand domain CLN3 PF02487.17 ORF28343 - 0.068 12.2 4.0 0.1 11.6 4.0 1.3 1 1 0 1 1 1 0 CLN3 protein Tymo_coat PF00983.18 ORF27616 - 0.033 14.0 0.1 0.047 13.5 0.1 1.3 1 0 0 1 1 1 0 Tymovirus coat protein Glycoprotein_G PF00802.19 ORF275 - 0.5 9.7 3.6 0.7 9.2 3.6 1.2 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G BRF1 PF07741.13 ORF275 - 5.1 7.5 10.3 9 6.7 10.3 1.4 1 0 0 1 1 1 0 Brf1-like TBP-binding domain TT_ORF2a PF08197.11 ORF25837 - 0.12 12.4 0.0 0.38 10.8 0.0 1.8 2 0 0 2 2 2 0 pORF2a truncated protein Myb_DNA-binding PF00249.31 ORF24585 - 1e-12 48.0 0.3 1.7e-12 47.3 0.3 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF24585 - 0.00091 19.4 0.8 0.0019 18.4 0.8 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF24585 - 0.014 15.3 7.3 0.15 12.0 7.3 2.3 1 1 0 1 1 1 0 Myb DNA-binding like PilX PF13681.6 ORF24585 - 0.11 12.9 0.2 0.16 12.4 0.2 1.3 1 0 0 1 1 1 0 Type IV pilus assembly protein PilX C-term CoA_binding_2 PF13380.6 ORF22210 - 6.1e-39 133.1 0.1 7.8e-39 132.8 0.1 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 ORF22210 - 1.2e-05 25.9 0.0 2.3e-05 25.0 0.0 1.5 2 0 0 2 2 2 1 CoA binding domain DUF1887 PF09002.11 ORF19665 - 0.26 9.9 0.0 0.3 9.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) Myticin-prepro PF10690.9 ORF18167 - 0.0036 17.5 0.7 0.0061 16.8 0.7 1.4 1 0 0 1 1 1 1 Myticin pre-proprotein from the mussel # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks163.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks163.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks163.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks163.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4291 PF14124.6 ORF151623 - 0.11 12.3 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4291) Gp_dh_C PF02800.20 ORF150931 - 4.6e-44 149.8 0.1 5.3e-44 149.6 0.1 1.0 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Asp23 PF03780.13 ORF150931 - 0.068 13.6 0.0 0.098 13.1 0.0 1.2 1 0 0 1 1 1 0 Asp23 family, cell envelope-related function UPF0054 PF02130.17 ORF148614 - 2.3e-39 134.1 0.0 2.7e-39 133.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0054 DDE_1 PF03184.19 ORF148614 - 0.12 12.0 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 DDE superfamily endonuclease Peptidase_M16_C PF05193.21 ORF147099 - 0.064 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Peptidase M16 inactive domain CoA_binding_3 PF13727.6 ORF144957 - 0.092 12.8 0.6 0.12 12.3 0.6 1.1 1 0 0 1 1 1 0 CoA-binding domain ELP6 PF09807.9 ORF144957 - 0.15 11.5 0.0 0.23 10.8 0.0 1.3 1 0 0 1 1 1 0 Elongation complex protein 6 FAM131 PF15010.6 ORF144277 - 0.082 12.8 0.2 0.099 12.5 0.2 1.1 1 0 0 1 1 1 0 Putative cell signalling zf-C2H2_10 PF16588.5 ORF143590 - 0.14 11.9 1.0 0.14 11.9 1.0 3.6 4 0 0 4 4 4 0 C2H2 zinc-finger Spectrin_like PF18373.1 ORF140782 - 0.019 15.0 0.2 0.06 13.4 0.2 1.9 1 0 0 1 1 1 0 Spectrin like domain Cnd1 PF12717.7 ORF140782 - 0.03 14.4 2.7 0.045 13.8 2.7 1.2 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 FliG_N PF14842.6 ORF140782 - 0.042 14.4 1.0 0.08 13.5 0.3 1.8 2 0 0 2 2 2 0 FliG N-terminal domain DUF3349 PF11829.8 ORF140782 - 0.12 13.2 0.3 0.21 12.4 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3349) HGTP_anticodon2 PF12745.7 ORF13927 - 0.13 11.8 0.7 0.16 11.5 0.7 1.1 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs Cornichon PF03311.14 ORF13905 - 5.8e-11 42.8 6.7 7.6e-11 42.4 6.7 1.1 1 0 0 1 1 1 1 Cornichon protein EF-hand_1 PF00036.32 ORF135064 - 4.1e-18 63.5 7.8 4.4e-06 25.8 0.6 4.1 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF135064 - 2e-15 55.3 3.6 1.4e-06 27.8 0.0 4.6 4 1 0 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF135064 - 3.9e-14 52.8 6.9 7.3e-08 32.8 0.2 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF135064 - 8.7e-09 35.1 9.1 5.6e-06 26.1 0.2 3.7 2 2 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF135064 - 2.3e-08 33.1 8.8 0.00019 20.7 0.1 3.1 3 0 0 3 3 3 2 EF hand EF-hand_9 PF14658.6 ORF135064 - 6.5e-07 29.6 0.2 0.00012 22.3 0.0 2.6 2 1 1 3 3 3 1 EF-hand domain EF-hand_11 PF08976.11 ORF135064 - 0.016 16.1 0.4 0.064 14.1 0.1 1.9 2 0 0 2 2 2 0 EF-hand domain DUF5109 PF17134.4 ORF135064 - 0.24 11.3 1.5 2.6 8.0 0.0 2.7 1 1 1 3 3 3 0 Domain of unknown function (DUF5109) IFT43 PF15305.6 ORF134379 - 1e-16 61.4 0.9 1.2e-16 61.1 0.9 1.1 1 0 0 1 1 1 1 Intraflagellar transport protein 43 NHR2 PF08788.11 ORF134115 - 0.048 13.4 0.6 0.091 12.5 0.6 1.4 1 0 0 1 1 1 0 NHR2 domain like DUF1737 PF08410.10 ORF132045 - 0.14 12.0 0.1 0.36 10.7 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1737) DUF899 PF05988.12 ORF132045 - 0.46 10.0 3.3 0.7 9.4 3.3 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) TCR PF03638.15 ORF130722 - 1.8e-12 47.4 22.9 1.8e-12 47.4 22.9 2.0 2 0 0 2 2 2 1 Tesmin/TSO1-like CXC domain, cysteine-rich domain Ank_2 PF12796.7 ORF130570 - 1.5e-10 41.6 0.0 2.2e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF130570 - 1.7e-08 34.5 0.1 8.4e-05 22.8 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF130570 - 2.1e-08 34.6 0.0 3.9e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF130570 - 1.8e-06 28.1 0.3 0.0063 16.8 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF130570 - 4.1e-05 23.7 0.0 0.042 14.4 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat LSR PF05624.14 ORF129864 - 0.013 15.4 0.4 0.013 15.4 0.4 2.2 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) DUF4969 PF16339.5 ORF129864 - 0.054 13.8 0.3 3.3 8.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4969) Jagunal PF07086.12 ORF129864 - 0.19 11.8 4.8 0.27 11.3 4.8 1.3 1 0 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis CbiQ PF02361.16 ORF129864 - 1.3 8.6 10.0 1.5 8.4 10.0 1.3 1 1 0 1 1 1 0 Cobalt transport protein PRA1 PF03208.19 ORF129623 - 0.052 13.2 11.1 0.071 12.7 11.1 1.2 1 0 0 1 1 1 0 PRA1 family protein FA_desaturase PF00487.24 ORF129623 - 0.24 11.2 4.1 0.3 10.9 4.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase ABA_WDS PF02496.16 ORF126680 - 2e-07 31.4 5.0 0.00057 20.3 0.1 2.7 1 1 2 3 3 3 2 ABA/WDS induced protein Pex14_N PF04695.13 ORF126680 - 7.4 7.2 7.6 10 6.8 7.4 1.4 1 1 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region NDK PF00334.19 ORF126546 - 2e-53 180.0 0.0 2.2e-53 179.9 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase PSI_PsaJ PF01701.18 ORF126546 - 0.2 12.2 0.0 0.32 11.6 0.0 1.3 1 0 0 1 1 1 0 Photosystem I reaction centre subunit IX / PsaJ MCM_N PF14551.6 ORF124691 - 0.015 15.9 0.0 0.021 15.4 0.0 1.4 1 1 0 1 1 1 0 MCM N-terminal domain TarH PF02203.15 ORF124098 - 0.04 13.8 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue DUF4482 PF14818.6 ORF122311 - 0.01 16.7 6.1 0.013 16.3 6.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4482) MCPVI PF02993.14 ORF122311 - 0.11 12.3 2.4 0.14 12.0 2.4 1.2 1 0 0 1 1 1 0 Minor capsid protein VI DUF2570 PF10828.8 ORF122311 - 0.64 9.9 4.7 1 9.2 4.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) DUF4407 PF14362.6 ORF122311 - 0.95 8.8 3.5 0.97 8.7 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) vATP-synt_E PF01991.18 ORF122311 - 1.5 8.2 11.0 2.2 7.6 11.0 1.2 1 0 0 1 1 1 0 ATP synthase (E/31 kDa) subunit ALMT PF11744.8 ORF122311 - 1.8 7.3 4.7 1.9 7.2 4.7 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter TMPIT PF07851.13 ORF122311 - 2.8 7.1 5.9 3.4 6.8 5.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein GAPT PF11770.8 ORF121394 - 0.059 13.2 1.6 0.075 12.9 1.6 1.3 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) TB2_DP1_HVA22 PF03134.19 ORF120098 - 3.8e-26 90.8 4.4 6e-26 90.2 4.4 1.3 1 0 0 1 1 1 1 TB2/DP1, HVA22 family Virul_fac_BrkB PF03631.15 ORF120098 - 0.13 11.8 9.0 0.28 10.8 9.0 1.5 1 1 0 1 1 1 0 Virulence factor BrkB Aldo_ket_red PF00248.21 ORF119194 - 2.7e-23 82.6 0.0 9.7e-23 80.8 0.0 1.7 1 1 0 1 1 1 1 Aldo/keto reductase family Tmp39 PF10271.9 ORF116928 - 0.018 14.1 2.6 0.032 13.2 0.9 1.8 1 1 1 2 2 2 0 Putative transmembrane protein PEN-2 PF10251.9 ORF116928 - 0.033 14.6 1.3 0.043 14.2 0.1 1.8 2 0 0 2 2 2 0 Presenilin enhancer-2 subunit of gamma secretase SieB PF14163.6 ORF116928 - 0.033 13.7 2.5 0.66 9.5 0.0 2.4 1 1 1 2 2 2 0 Super-infection exclusion protein B NICE-3 PF07406.11 ORF115712 - 0.039 13.9 0.7 5.5 6.9 0.1 2.2 2 0 0 2 2 2 0 NICE-3 protein Tmp39 PF10271.9 ORF115447 - 0.018 14.1 2.6 0.032 13.2 0.9 1.8 1 1 1 2 2 2 0 Putative transmembrane protein PEN-2 PF10251.9 ORF115447 - 0.033 14.6 1.3 0.043 14.2 0.1 1.8 2 0 0 2 2 2 0 Presenilin enhancer-2 subunit of gamma secretase SieB PF14163.6 ORF115447 - 0.033 13.7 2.5 0.66 9.5 0.0 2.4 1 1 1 2 2 2 0 Super-infection exclusion protein B RNase_H PF00075.24 ORF112881 - 2.1e-55 186.8 0.0 2.3e-55 186.7 0.0 1.0 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.6 ORF112881 - 0.028 14.2 0.0 0.041 13.7 0.0 1.3 1 0 0 1 1 1 0 Reverse transcriptase-like PM0188 PF11477.8 ORF112881 - 0.18 11.0 0.0 0.2 10.8 0.0 1.0 1 0 0 1 1 1 0 Sialyltransferase PMO188 Neil1-DNA_bind PF09292.10 ORF112325 - 0.086 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Endonuclease VIII-like 1, DNA bind Flexi_CP_N PF08358.10 ORF110679 - 0.025 14.6 0.1 6.6 6.8 0.0 3.3 4 0 0 4 4 4 0 Carlavirus coat Sep15_SelM PF08806.11 ORF108256 - 0.11 12.7 0.5 0.22 11.7 0.5 1.5 1 0 0 1 1 1 0 Sep15/SelM redox domain VP9 PF09625.10 ORF108256 - 0.11 12.6 0.1 0.31 11.2 0.0 1.8 2 0 0 2 2 2 0 VP9 protein Uroplakin_II PF07353.12 ORF107759 - 0.065 12.7 0.2 0.097 12.2 0.2 1.2 1 0 0 1 1 1 0 Uroplakin II MORN PF02493.20 ORF106961 - 0.0038 17.0 25.0 0.011 15.6 0.5 5.7 7 0 0 7 7 7 3 MORN repeat TT_ORF2a PF08197.11 ORF1054 - 0.12 12.4 0.0 0.38 10.8 0.0 1.8 2 0 0 2 2 2 0 pORF2a truncated protein DUF16 PF01519.16 ORF104372 - 0.023 15.2 10.6 0.053 14.0 10.5 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 CENP-Q PF13094.6 ORF104372 - 0.42 10.8 10.1 1.4 9.1 2.9 2.2 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Fib_alpha PF08702.10 ORF104372 - 5.2 7.3 11.6 1.3 9.2 0.4 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Rad50_zn_hook PF04423.14 ORF104372 - 7.2 6.5 11.5 25 4.8 0.3 3.8 3 0 0 3 3 3 0 Rad50 zinc hook motif E1-E2_ATPase PF00122.20 ORF10172 - 7 6.1 6.9 1.7 8.1 0.3 2.0 1 1 1 2 2 2 0 E1-E2 ATPase LCE6A PF15858.5 ORF100459 - 1.3 9.8 8.8 1.7 9.4 0.3 2.5 2 1 0 2 2 2 0 Late cornified envelope protein 6A family cNMP_binding PF00027.29 NODE_43589_length_460_cov_2.004706_g35899_i0reverse_frame_1 - 7.1e-09 35.6 0.0 1.1e-08 35.0 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DnaJ PF00226.31 NODE_43585_length_460_cov_2.397647_g35895_i0reverse_frame_1 - 1.7e-07 31.3 0.0 2.5e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain DUF1127 PF06568.11 NODE_43583_length_460_cov_2.442353_g35893_i0forward_frame_1 - 2.1e-13 49.7 8.1 3.3e-13 49.1 8.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1127) Spore_II_R PF09551.10 NODE_43582_length_460_cov_3.265882_g35892_i0forward_frame_1 - 0.4 11.2 2.7 0.69 10.4 2.7 1.4 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) RabGAP-TBC PF00566.18 NODE_43582_length_460_cov_3.265882_g35892_i0forward_frame_1 - 4.5 6.9 7.4 10 5.7 2.8 2.0 2 0 0 2 2 2 0 Rab-GTPase-TBC domain DUF126 PF01989.16 NODE_43569_length_460_cov_74.614118_g35879_i0forward_frame_1 - 0.014 15.2 0.1 0.043 13.6 0.1 1.8 2 0 0 2 2 2 0 Aconitase X swivel domain PAC4 PF16093.5 NODE_43568_length_460_cov_83.715294_g35878_i0forward_frame_1 - 0.12 12.6 0.1 0.28 11.4 0.1 1.6 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 ComFB PF10719.9 NODE_43564_length_460_cov_93.223529_g35874_i0forward_frame_1 - 0.14 12.2 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Late competence development protein ComFB UCH PF00443.29 NODE_43555_length_460_cov_138.256471_g35865_i0reverse_frame_1 - 0.00022 20.8 0.2 0.00031 20.3 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase BPD_transp_1 PF00528.22 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 1.9e-09 37.5 5.1 2.8e-09 37.0 5.1 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SyrA PF11089.8 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 0.018 15.1 0.3 0.047 13.8 0.3 1.7 1 0 0 1 1 1 0 Exopolysaccharide production repressor Trep_Strep PF09605.10 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 0.038 14.0 7.3 0.048 13.6 7.3 1.1 1 0 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) MotA_ExbB PF01618.16 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 0.067 12.9 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family FtsX PF02687.21 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_1 - 0.41 11.1 10.7 0.52 10.8 9.2 1.9 2 1 0 2 2 2 0 FtsX-like permease family C12orf66_like PF09404.10 NODE_43520_length_461_cov_3.732394_g35834_i0reverse_frame_1 - 0.0084 15.0 0.1 0.01 14.7 0.1 1.1 1 0 0 1 1 1 1 KICSTOR complex C12orf66 like DUF5044 PF16447.5 NODE_43520_length_461_cov_3.732394_g35834_i0reverse_frame_1 - 0.12 12.2 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5044) ATX_III PF08098.11 NODE_43515_length_461_cov_63.899061_g35830_i0forward_frame_1 - 0.011 15.8 2.9 0.029 14.4 2.9 1.7 1 0 0 1 1 1 0 Anemonia sulcata toxin III family bPH_3 PF14470.6 NODE_43513_length_461_cov_71.014085_g35828_i0forward_frame_1 - 0.0025 18.1 0.1 0.0041 17.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial PH domain MAAL_C PF07476.11 NODE_43513_length_461_cov_71.014085_g35828_i0forward_frame_1 - 0.063 12.4 0.0 0.16 11.1 0.0 1.6 2 0 0 2 2 2 0 Methylaspartate ammonia-lyase C-terminus ICMT PF04140.14 NODE_43494_length_461_cov_111.809859_g35810_i0reverse_frame_1 - 1.5e-24 86.2 0.1 1.9e-24 85.9 0.1 1.1 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 NODE_43494_length_461_cov_111.809859_g35810_i0reverse_frame_1 - 1.8e-09 37.9 0.3 2.3e-09 37.6 0.3 1.1 1 0 0 1 1 1 1 Phospholipid methyltransferase DUF1295 PF06966.12 NODE_43494_length_461_cov_111.809859_g35810_i0reverse_frame_1 - 0.006 16.1 0.5 0.0074 15.8 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Wzy_C PF04932.15 NODE_43471_length_462_cov_1.906323_g35789_i0forward_frame_1 - 0.039 13.6 0.0 0.043 13.4 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUSP PF06337.12 NODE_43469_length_462_cov_2.213115_g35787_i0forward_frame_1 - 0.0012 19.4 1.0 0.0021 18.6 1.0 1.4 1 0 0 1 1 1 1 DUSP domain Peptidase_S49_N PF08496.10 NODE_43461_length_462_cov_3.346604_g35779_i0forward_frame_1 - 5.6 7.0 7.9 3.6 7.6 3.9 1.9 1 1 1 2 2 2 0 Peptidase family S49 N-terminal VPDSG-CTERM PF18205.1 NODE_43457_length_462_cov_60.599532_g35775_i0forward_frame_1 - 1.1 9.2 3.0 2.2 8.2 3.0 1.5 1 0 0 1 1 1 0 VPDSG-CTERM motif Hep_core_N PF08290.11 NODE_43435_length_462_cov_142.669789_g35753_i0reverse_frame_1 - 2.9 8.0 5.8 0.31 11.1 0.6 2.2 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger U79_P34 PF03064.16 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 0.12 11.7 13.2 0.15 11.4 13.2 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 ATP-synt_E PF05680.12 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 3.4 8.1 8.7 2.3 8.6 6.6 1.7 2 0 0 2 2 2 0 ATP synthase E chain DDRGK PF09756.9 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 4.9 6.7 18.4 8.7 5.9 18.4 1.3 1 0 0 1 1 1 0 DDRGK domain EMC3_TMCO1 PF01956.16 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 5.6 6.7 5.3 7.6 6.2 5.3 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like TT_ORF1 PF02956.14 NODE_43434_length_462_cov_143.637002_g34682_i1forward_frame_1 - 6.7 5.3 11.5 11 4.5 11.5 1.4 1 0 0 1 1 1 0 TT viral orf 1 Ribosomal_60s PF00428.19 NODE_43430_length_462_cov_168.185012_g35749_i0reverse_frame_1 - 4.1e-18 65.7 2.6 6.9e-18 65.0 2.6 1.3 1 0 0 1 1 1 1 60s Acidic ribosomal protein FoP_duplication PF13865.6 NODE_43430_length_462_cov_168.185012_g35749_i0reverse_frame_1 - 0.22 12.1 5.0 0.38 11.3 5.0 1.3 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 CSRNP_N PF16019.5 NODE_43428_length_462_cov_176.400468_g35747_i0reverse_frame_1 - 0.18 11.7 3.9 0.22 11.4 3.9 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Microtub_bind PF13931.6 NODE_43425_length_462_cov_188.512881_g35744_i0reverse_frame_1 - 0.017 15.5 5.4 0.024 15.0 5.4 1.4 1 0 0 1 1 1 0 Kinesin-associated microtubule-binding Ribosomal_L24e PF01246.20 NODE_43422_length_462_cov_226.103044_g35741_i0reverse_frame_1 - 2.5e-16 59.7 2.0 2.5e-16 59.7 2.0 1.9 2 0 0 2 2 2 1 Ribosomal protein L24e DUF775 PF05603.12 NODE_43422_length_462_cov_226.103044_g35741_i0reverse_frame_1 - 0.074 12.6 1.6 0.086 12.4 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF775) DUF4512 PF14975.6 NODE_43422_length_462_cov_226.103044_g35741_i0reverse_frame_1 - 2.5 9.0 7.1 0.61 10.9 3.3 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4512) Presenilin PF01080.17 NODE_43422_length_462_cov_226.103044_g35741_i0reverse_frame_1 - 4.9 5.8 4.5 5.7 5.6 4.5 1.0 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 NODE_43422_length_462_cov_226.103044_g35741_i0reverse_frame_1 - 9.3 4.9 8.9 12 4.6 8.9 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 7TM_transglut PF14402.6 NODE_43413_length_462_cov_1745.316159_g35732_i0forward_frame_1 - 0.0072 15.8 3.2 0.013 15.0 0.9 1.9 1 1 1 2 2 2 1 7 transmembrane helices usually fused to an inactive transglutaminase GMP_PDE_delta PF05351.11 NODE_43412_length_462_cov_2782.981265_g35731_i0reverse_frame_1 - 0.026 14.6 0.0 0.033 14.3 0.0 1.1 1 0 0 1 1 1 0 GMP-PDE, delta subunit AA_permease_2 PF13520.6 NODE_43394_length_463_cov_2.542056_g35714_i0forward_frame_3 - 1e-10 41.0 2.7 1.2e-10 40.8 2.7 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 NODE_43394_length_463_cov_2.542056_g35714_i0forward_frame_3 - 3e-09 36.0 2.8 3.2e-09 35.9 2.8 1.0 1 0 0 1 1 1 1 Amino acid permease PX PF00787.24 NODE_43392_length_463_cov_2.978972_g35712_i0forward_frame_3 - 2.4e-15 56.5 0.2 6.9e-15 55.0 0.0 1.7 2 0 0 2 2 2 1 PX domain SSP160 PF06933.11 NODE_43390_length_463_cov_3.385514_g35710_i0reverse_frame_3 - 0.89 7.7 21.7 1.2 7.3 21.7 1.4 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 WASH_WAHD PF11945.8 NODE_43381_length_463_cov_62.299065_g35701_i0reverse_frame_2 - 0.045 13.3 3.1 5 6.5 0.0 2.0 1 1 1 2 2 2 0 WAHD domain of WASH complex DUF3287 PF11690.8 NODE_43381_length_463_cov_62.299065_g35701_i0reverse_frame_2 - 0.078 12.7 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) Snapin_Pallidin PF14712.6 NODE_43381_length_463_cov_62.299065_g35701_i0reverse_frame_2 - 0.14 12.6 2.3 0.27 11.7 2.3 1.6 1 1 0 1 1 1 0 Snapin/Pallidin Scaffolding_pro PF11418.8 NODE_43380_length_463_cov_62.485981_g35700_i0reverse_frame_3 - 0.014 15.9 1.0 0.026 15.1 0.5 1.7 2 0 0 2 2 2 0 Phi29 scaffolding protein Fzo_mitofusin PF04799.13 NODE_43378_length_463_cov_70.787383_g35698_i0reverse_frame_2 - 0.2 11.2 4.6 0.15 11.6 3.1 1.6 1 1 1 2 2 2 0 fzo-like conserved region COG2 PF06148.11 NODE_43378_length_463_cov_70.787383_g35698_i0reverse_frame_2 - 0.41 10.7 6.8 0.062 13.4 1.7 1.9 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 LsmAD PF06741.13 NODE_43378_length_463_cov_70.787383_g35698_i0reverse_frame_2 - 3.5 8.3 8.9 1.1 9.9 0.5 2.4 1 1 1 2 2 2 0 LsmAD domain VPS13_mid_rpt PF16910.5 NODE_43376_length_463_cov_86.418224_g35696_i0reverse_frame_2 - 0.042 13.3 0.5 0.058 12.8 0.5 1.3 1 0 0 1 1 1 0 Repeating coiled region of VPS13 FidL_like PF15941.5 NODE_43376_length_463_cov_86.418224_g35696_i0reverse_frame_2 - 0.69 10.4 5.8 0.62 10.6 0.7 2.3 1 1 1 2 2 2 0 FidL-like putative membrane protein 7tm_2 PF00002.24 NODE_43371_length_463_cov_99.233645_g35691_i0reverse_frame_2 - 0.019 14.3 1.6 0.032 13.5 1.6 1.3 1 0 0 1 1 1 0 7 transmembrane receptor (Secretin family) YpmT PF17431.2 NODE_43371_length_463_cov_99.233645_g35691_i0reverse_frame_2 - 0.099 12.7 0.9 0.17 11.9 0.9 1.3 1 0 0 1 1 1 0 Uncharacterized YmpT-like zf-CCCH PF00642.24 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 0.00071 19.4 1.9 0.0013 18.5 0.4 2.1 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 0.031 14.3 0.7 0.031 14.3 0.7 2.2 2 0 0 2 2 2 0 Zinc finger domain Torus PF16131.5 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 0.032 14.9 0.7 0.055 14.2 0.0 1.7 2 0 0 2 2 2 0 Torus domain zf-CCCH_4 PF18044.1 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 0.034 14.0 1.0 0.034 14.0 1.0 2.3 2 0 0 2 2 2 0 CCCH-type zinc finger DUF4551 PF15087.6 NODE_43363_length_463_cov_150.843458_g35684_i0forward_frame_3 - 1.3 7.8 2.5 1.4 7.6 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) Pex19 PF04614.12 NODE_43361_length_463_cov_162.623832_g9609_i2reverse_frame_2 - 0.011 15.5 3.9 0.013 15.3 3.9 1.1 1 0 0 1 1 1 0 Pex19 protein family Dak2 PF02734.17 NODE_43361_length_463_cov_162.623832_g9609_i2reverse_frame_2 - 0.091 12.7 3.9 0.11 12.4 0.9 2.0 1 1 1 2 2 2 0 DAK2 domain Pex14_N PF04695.13 NODE_43361_length_463_cov_162.623832_g9609_i2reverse_frame_2 - 0.5 11.0 5.0 1.9 9.2 4.7 1.8 1 1 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Rhodanese PF00581.20 NODE_43356_length_463_cov_235.689252_g35678_i0reverse_frame_3 - 1.4e-12 48.0 0.0 2.6e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain Wzy_C PF04932.15 NODE_43351_length_463_cov_542.988318_g35673_i0forward_frame_2 - 0.65 9.6 3.1 0.66 9.6 3.1 1.2 1 0 0 1 1 1 0 O-Antigen ligase MamL-1 PF09596.10 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_3 - 0.096 13.0 0.3 0.096 13.0 0.3 2.2 2 0 0 2 2 2 0 MamL-1 domain Herpes_UL51 PF04540.13 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_2 - 0.092 12.5 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus UL51 protein DUF3649 PF12365.8 NODE_43344_length_463_cov_916.579439_g35666_i0forward_frame_2 - 0.2 11.4 4.8 43 3.9 0.1 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3649) Cytochrom_C550 PF14495.6 NODE_43336_length_463_cov_7850.413551_g35659_i0forward_frame_3 - 9.3e-49 164.6 0.0 1.1e-48 164.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome c-550 domain Cytochrom_C PF00034.21 NODE_43336_length_463_cov_7850.413551_g35659_i0forward_frame_3 - 1.6e-08 35.6 0.0 2.3e-08 35.1 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 NODE_43336_length_463_cov_7850.413551_g35659_i0forward_frame_3 - 5.1e-05 23.5 0.7 0.00013 22.2 0.7 1.8 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C1 PF02167.15 NODE_43336_length_463_cov_7850.413551_g35659_i0forward_frame_3 - 0.098 12.4 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Cytochrome C1 family DUF1211 PF06736.11 NODE_43333_length_464_cov_2.030303_g35656_i0reverse_frame_2 - 3.9 8.0 6.0 21 5.7 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1211) LMBR1 PF04791.16 NODE_43329_length_464_cov_3.123543_g35652_i0reverse_frame_3 - 0.037 12.9 9.5 0.044 12.7 9.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein NADH_oxidored PF08040.11 NODE_43324_length_464_cov_3.501166_g35647_i0forward_frame_2 - 0.23 11.2 0.9 0.44 10.3 0.9 1.5 1 0 0 1 1 1 0 MNLL subunit Syncollin PF15138.6 NODE_43323_length_464_cov_3.545455_g35646_i0forward_frame_3 - 0.034 14.3 0.2 0.055 13.7 0.2 1.3 1 0 0 1 1 1 0 Syncollin UPF0114 PF03350.16 NODE_43322_length_464_cov_3.685315_g35645_i0reverse_frame_2 - 0.11 12.6 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 Tyosinase_C PF18132.1 NODE_43313_length_464_cov_85.515152_g35636_i0reverse_frame_2 - 0.089 13.5 0.0 0.15 12.7 0.0 1.4 1 1 0 1 1 1 0 Tyosinase C-terminal domain DUF1116 PF06545.11 NODE_43309_length_464_cov_108.116550_g35632_i0reverse_frame_2 - 0.074 12.5 0.2 0.14 11.6 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1116) Ribosomal_L7Ae PF01248.26 NODE_43306_length_464_cov_116.468531_g35629_i0reverse_frame_3 - 2.4e-22 78.5 0.7 3.7e-22 77.8 0.7 1.3 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Antimicrobial19 PF08225.11 NODE_43306_length_464_cov_116.468531_g35629_i0reverse_frame_3 - 0.0044 16.6 0.4 2.9 7.6 0.1 2.5 2 0 0 2 2 2 2 Pseudin antimicrobial peptide Atypical_Card PF18461.1 NODE_43306_length_464_cov_116.468531_g35629_i0reverse_frame_3 - 0.065 13.5 0.0 0.098 12.9 0.0 1.3 1 0 0 1 1 1 0 Atypical caspase recruitment domain PPR_2 PF13041.6 NODE_43306_length_464_cov_116.468531_g35629_i0reverse_frame_3 - 0.14 12.4 0.0 3.6 7.9 0.0 2.4 2 0 0 2 2 2 0 PPR repeat family PPR_2 PF13041.6 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 2.7e-17 62.7 0.1 7.3e-13 48.5 0.0 1.7 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 2.3e-16 59.6 0.0 1.2e-08 34.9 0.0 1.8 1 1 2 3 3 3 3 Pentatricopeptide repeat domain PPR PF01535.20 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 6.8e-12 44.8 0.0 1.5e-05 24.9 0.0 3.2 3 0 0 3 3 3 3 PPR repeat PPR_1 PF12854.7 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 2.9e-10 39.7 0.0 0.00042 20.0 0.0 2.5 3 0 0 3 3 3 2 PPR repeat CaATP_NAI PF12515.8 NODE_43304_length_464_cov_128.356643_g35627_i0reverse_frame_3 - 5.5 6.7 5.1 3.4 7.4 0.0 2.6 3 0 0 3 3 3 0 Ca2+-ATPase N terminal autoinhibitory domain CO_deh_flav_C PF03450.17 NODE_43301_length_464_cov_177.228438_g35624_i0reverse_frame_3 - 0.1 12.8 0.1 0.18 12.0 0.1 1.3 1 0 0 1 1 1 0 CO dehydrogenase flavoprotein C-terminal domain Profilin PF00235.19 NODE_43294_length_464_cov_5867.270396_g33394_i2forward_frame_2 - 0.00011 22.5 0.0 0.00015 22.1 0.0 1.1 1 0 0 1 1 1 1 Profilin DNA_pol3_a_NII PF11490.8 NODE_43280_length_465_cov_2.369767_g35607_i0reverse_frame_2 - 3.4 7.6 4.1 1.7 8.6 0.8 1.8 2 0 0 2 2 2 0 DNA polymerase III polC-type N-terminus II Cse1 PF08506.10 NODE_43280_length_465_cov_2.369767_g35607_i0forward_frame_3 - 1.2e-06 27.6 0.8 1.4e-06 27.4 0.8 1.1 1 0 0 1 1 1 1 Cse1 DUF2067 PF09840.9 NODE_43280_length_465_cov_2.369767_g35607_i0forward_frame_3 - 0.012 15.2 0.2 0.016 14.8 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) Ribosomal_L12_N PF16320.5 NODE_43280_length_465_cov_2.369767_g35607_i0forward_frame_3 - 0.45 10.3 1.6 11 5.9 0.1 2.8 3 0 0 3 3 3 0 Ribosomal protein L7/L12 dimerisation domain Dus PF01207.17 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 7.1e-31 107.4 0.0 8.9e-31 107.1 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 1.2e-07 31.5 0.0 1.4e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.14 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 8.2e-06 25.3 0.0 1.1e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 2.8e-05 23.5 0.0 3.8e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Thiamine monophosphate synthase G3P_antiterm PF04309.12 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 0.00015 21.3 0.0 0.0002 20.8 0.0 1.2 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator FMN_dh PF01070.18 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 0.0042 16.2 0.1 0.0062 15.6 0.1 1.3 1 1 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 0.0055 16.1 0.0 0.0068 15.8 0.0 1.1 1 0 0 1 1 1 1 Nitronate monooxygenase SOR_SNZ PF01680.17 NODE_43272_length_465_cov_3.060465_g35599_i0reverse_frame_2 - 0.044 13.6 0.0 0.059 13.1 0.0 1.1 1 0 0 1 1 1 0 SOR/SNZ family YfhO PF09586.10 NODE_43265_length_465_cov_6.088372_g35592_i0reverse_frame_3 - 0.19 9.9 19.9 0.2 9.8 19.9 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF1516 PF07457.11 NODE_43252_length_465_cov_88.976744_g35580_i0reverse_frame_3 - 0.0073 16.5 16.2 0.077 13.2 1.7 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1516) MFS_5 PF05631.14 NODE_43252_length_465_cov_88.976744_g35580_i0reverse_frame_3 - 0.054 12.4 6.1 0.047 12.6 5.2 1.3 1 1 0 1 1 1 0 Sugar-tranasporters, 12 TM Arteri_Gl PF00951.18 NODE_43252_length_465_cov_88.976744_g35580_i0reverse_frame_3 - 0.25 11.1 4.4 0.44 10.3 4.4 1.4 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF2070 PF09843.9 NODE_43252_length_465_cov_88.976744_g35580_i0reverse_frame_3 - 0.85 7.8 11.5 0.99 7.6 11.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) HEPN_RiboL-PSP PF18735.1 NODE_43237_length_465_cov_192.393023_g35566_i0reverse_frame_3 - 0.67 9.8 10.1 0.85 9.5 10.1 1.1 1 0 0 1 1 1 0 RiboL-PSP-HEPN Ribosomal_L37ae PF01780.19 NODE_43233_length_465_cov_258.674419_g35562_i0reverse_frame_2 - 8.2e-34 115.6 10.3 8.2e-34 115.6 10.3 1.8 2 0 0 2 2 2 1 Ribosomal L37ae protein family Fer4 PF00037.27 NODE_43233_length_465_cov_258.674419_g35562_i0reverse_frame_2 - 4.1 7.4 9.1 3.7 7.5 3.4 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Profilin PF00235.19 NODE_43219_length_465_cov_5853.586047_g33394_i1reverse_frame_2 - 0.00011 22.5 0.0 0.00015 22.1 0.0 1.1 1 0 0 1 1 1 1 Profilin DUF389 PF04087.14 ORF99542 - 0.063 13.3 0.3 0.11 12.5 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF389) GlpM PF06942.12 ORF9936 - 0.35 11.3 8.6 0.21 12.0 6.4 1.7 2 0 0 2 2 2 0 GlpM protein bZIP_1 PF00170.21 ORF98769 - 0.00077 19.5 16.5 0.0022 18.0 15.9 1.9 1 1 1 2 2 2 1 bZIP transcription factor CortBP2 PF09727.9 ORF98769 - 0.00085 19.3 9.7 0.0011 19.0 9.7 1.0 1 0 0 1 1 1 1 Cortactin-binding protein-2 Mei5_like PF17021.5 ORF98769 - 0.0025 17.8 9.5 0.0037 17.3 9.5 1.2 1 0 0 1 1 1 1 Putative double-strand recombination repair-like COG5 PF10392.9 ORF98769 - 0.015 15.5 5.9 0.34 11.1 5.9 2.0 1 1 0 1 1 1 0 Golgi transport complex subunit 5 BRE1 PF08647.11 ORF98769 - 0.028 14.5 11.2 0.04 14.0 11.2 1.4 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase SlyX PF04102.12 ORF98769 - 0.028 15.0 2.1 0.028 15.0 2.1 1.7 1 1 1 2 2 2 0 SlyX MCM_N PF14551.6 ORF98769 - 0.029 14.9 0.8 0.041 14.5 0.8 1.3 1 0 0 1 1 1 0 MCM N-terminal domain ABC_tran_CTD PF16326.5 ORF98769 - 0.064 13.5 7.3 0.11 12.7 6.4 1.9 1 1 1 2 2 2 0 ABC transporter C-terminal domain Sod_Fe_N PF00081.22 ORF98769 - 0.11 13.0 1.7 0.17 12.4 0.2 1.9 1 1 1 2 2 2 0 Iron/manganese superoxide dismutases, alpha-hairpin domain YtxH PF12732.7 ORF98769 - 0.16 12.6 5.6 0.42 11.2 5.6 1.7 1 1 0 1 1 1 0 YtxH-like protein FapA PF03961.13 ORF98769 - 0.17 10.4 9.9 0.2 10.2 9.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF16 PF01519.16 ORF98769 - 0.28 11.7 7.4 0.49 10.9 7.4 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 RasGAP_C PF03836.15 ORF98769 - 0.3 11.2 10.5 0.073 13.2 4.5 2.1 1 1 1 2 2 2 0 RasGAP C-terminus Vma12 PF11712.8 ORF98769 - 0.47 10.5 2.5 0.55 10.3 2.5 1.2 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Atg14 PF10186.9 ORF98769 - 0.55 9.3 11.5 0.74 8.8 11.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 bZIP_2 PF07716.15 ORF98769 - 0.62 10.2 18.2 0.072 13.2 11.3 2.4 1 1 2 3 3 2 0 Basic region leucine zipper DUF4446 PF14584.6 ORF98769 - 0.79 9.7 5.7 0.98 9.4 5.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) UPF0242 PF06785.11 ORF98769 - 1.8 8.7 8.9 2.6 8.1 8.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4140 PF13600.6 ORF98769 - 3.8 8.0 8.6 22 5.6 8.6 2.0 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Arm-DNA-bind_5 PF17293.2 ORF98769 - 4.2 7.9 13.1 1.7 9.1 5.3 2.2 1 1 1 2 2 2 0 Arm DNA-binding domain Presenilin PF01080.17 ORF98769 - 6.6 5.4 4.8 7.8 5.1 4.8 1.0 1 0 0 1 1 1 0 Presenilin DUF2570 PF10828.8 ORF98769 - 6.9 6.5 9.5 1.1 9.2 1.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) TMPIT PF07851.13 ORF98769 - 8.6 5.5 8.0 11 5.1 8.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein XhlA PF10779.9 ORF98769 - 9.3 6.5 11.1 2.5 8.4 5.5 2.5 1 1 2 3 3 3 0 Haemolysin XhlA DUF3592 PF12158.8 ORF98763 - 0.07 13.2 0.5 0.37 10.9 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3592) Plant_vir_prot PF01307.17 ORF95553 - 0.012 15.9 0.1 0.017 15.4 0.1 1.3 1 0 0 1 1 1 0 Plant viral movement protein CagS PF16707.5 ORF95553 - 0.031 14.3 0.0 0.037 14.0 0.0 1.3 1 0 0 1 1 1 0 Cag pathogenicity island protein S of Helicobacter pylori DGOK PF05035.12 ORF94093 - 0.13 11.1 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 2-keto-3-deoxy-galactonokinase PH_16 PF17838.1 ORF93505 - 0.15 11.9 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 PH domain DUF819 PF05684.12 ORF92780 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) DUF819 PF05684.12 ORF91978 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) MMgT PF10270.9 ORF91509 - 0.071 13.5 0.0 0.098 13.0 0.0 1.2 1 0 0 1 1 1 0 Membrane magnesium transporter DUF1860 PF08949.10 ORF91509 - 0.2 11.4 0.0 0.28 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1860) Cupin_4 PF08007.12 ORF91380 - 9.2e-08 31.9 0.0 1e-07 31.7 0.0 1.1 1 0 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF91380 - 4e-07 30.5 0.0 7.1e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_8 PF13621.6 ORF91380 - 1.4e-05 25.0 0.0 2.3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Cupin-like domain Cupin_2 PF07883.11 ORF91380 - 0.00046 19.8 0.0 0.00094 18.9 0.0 1.5 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 ORF91380 - 0.18 11.4 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 Cupin Rep_fac-A_3 PF08661.11 ORF90206 - 1.5e-09 38.2 0.0 1.8e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 Replication factor A protein 3 YtpI PF14007.6 ORF89304 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF89304 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter DUF3480 PF11979.8 ORF87603 - 0.14 11.1 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3480) PAC4 PF16093.5 ORF87603 - 0.2 11.9 3.7 0.12 12.5 1.9 1.6 2 0 0 2 2 2 0 Proteasome assembly chaperone 4 ALIX_LYPXL_bnd PF13949.6 ORF85765 - 5.5e-19 68.6 10.8 1.6e-14 53.9 5.9 2.0 1 1 1 2 2 2 2 ALIX V-shaped domain binding to HIV L27_1 PF09058.10 ORF85765 - 0.00032 20.6 3.6 0.0012 18.8 0.1 3.1 2 2 0 2 2 2 1 L27_1 DUF1722 PF08349.11 ORF85765 - 0.00038 20.7 5.0 0.00062 20.0 4.7 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1722) tRNA_lig_CPD PF08302.11 ORF85765 - 0.00058 19.4 3.4 0.00074 19.0 3.4 1.1 1 0 0 1 1 1 1 Fungal tRNA ligase phosphodiesterase domain GLE1 PF07817.13 ORF85765 - 0.0022 17.2 0.9 0.0031 16.7 0.9 1.3 1 0 0 1 1 1 1 GLE1-like protein Vma12 PF11712.8 ORF85765 - 0.0075 16.3 2.7 0.0096 16.0 2.7 1.3 1 0 0 1 1 1 1 Endoplasmic reticulum-based factor for assembly of V-ATPase OmpH PF03938.14 ORF85765 - 0.009 16.4 4.5 0.012 16.0 4.5 1.3 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) GON PF08685.11 ORF85765 - 0.017 15.0 0.5 0.029 14.3 0.4 1.4 1 1 0 1 1 1 0 GON domain G6PD_N PF00479.22 ORF85765 - 0.02 15.6 1.9 0.022 15.4 1.9 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, NAD binding domain YihI PF04220.12 ORF85765 - 0.021 14.6 3.2 0.024 14.3 2.4 1.4 1 1 0 1 1 1 0 Der GTPase activator (YihI) EMC3_TMCO1 PF01956.16 ORF85765 - 0.036 13.8 3.0 0.047 13.4 3.0 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF2852 PF11014.8 ORF85765 - 0.039 14.1 0.4 0.056 13.6 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) Isochorismatase PF00857.20 ORF85765 - 0.053 13.7 0.0 0.069 13.3 0.0 1.1 1 0 0 1 1 1 0 Isochorismatase family SseC PF04888.12 ORF85765 - 0.091 12.3 0.8 0.11 12.1 0.8 1.2 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family EST1 PF10374.9 ORF85765 - 0.1 13.2 6.4 0.23 12.1 6.4 1.7 1 1 0 1 1 1 0 Telomerase activating protein Est1 AAA_23 PF13476.6 ORF85765 - 0.12 12.8 7.4 0.18 12.3 7.4 1.3 1 0 0 1 1 1 0 AAA domain PIN_12 PF16289.5 ORF85765 - 0.13 12.8 6.3 0.18 12.3 6.3 1.3 1 0 0 1 1 1 0 PIN domain Atg14 PF10186.9 ORF85765 - 0.22 10.6 8.1 0.35 9.9 8.1 1.3 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4404 PF14357.6 ORF85765 - 0.39 11.4 7.2 0.52 11.0 3.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) LOH1CR12 PF10158.9 ORF85765 - 0.69 9.9 5.6 0.92 9.5 2.6 2.2 1 1 1 2 2 2 0 Tumour suppressor protein WD-3 PF09765.9 ORF85765 - 0.72 9.1 5.6 1.8 7.9 4.4 1.8 1 1 1 2 2 2 0 WD-repeat region TMEM156 PF15106.6 ORF854 - 0.77 9.1 6.5 0.1 12.0 1.4 1.8 2 0 0 2 2 2 0 TMEM156 protein family EMP24_GP25L PF01105.24 ORF84640 - 0.036 14.0 0.7 0.039 13.9 0.7 1.2 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Ribosomal_S11 PF00411.19 ORF82090 - 7.6e-38 129.3 0.2 9.2e-38 129.0 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 BET PF17035.5 ORF81901 - 1.2e-05 25.4 2.7 2.6e-05 24.3 2.7 1.6 1 0 0 1 1 1 1 Bromodomain extra-terminal - transcription regulation Mvb12 PF09452.10 ORF81901 - 0.033 14.6 0.2 0.068 13.6 0.2 1.5 1 1 0 1 1 1 0 ESCRT-I subunit Mvb12 Cdh1_DBD_1 PF18196.1 ORF81901 - 0.24 11.7 4.9 0.099 13.0 2.2 1.7 1 1 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 POX PF07526.11 ORF81901 - 1.5 9.4 5.8 0.6 10.7 1.5 2.0 2 0 0 2 2 2 0 Associated with HOX FumaraseC_C PF10415.9 ORF81416 - 5.7e-05 23.5 9.1 0.036 14.5 0.7 3.4 3 1 0 3 3 3 2 Fumarase C C-terminus PhageMin_Tail PF10145.9 ORF81416 - 0.0011 18.9 8.2 0.042 13.7 3.3 2.2 2 0 0 2 2 2 2 Phage-related minor tail protein Get5_C PF18514.1 ORF81416 - 0.0069 16.1 5.2 12 5.7 0.0 4.1 4 0 0 4 4 4 1 Get5 C-terminal domain ISP1_C PF18161.1 ORF81416 - 0.0087 16.0 0.0 1.1 9.3 0.0 2.6 1 1 1 2 2 2 1 ISP1 C-terminal DUF1104 PF06518.11 ORF81416 - 0.046 14.1 4.0 0.079 13.3 4.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) RHH_4 PF13467.6 ORF81416 - 0.062 13.2 1.9 16 5.5 0.1 3.1 2 1 1 3 3 3 0 Ribbon-helix-helix domain AD PF09793.9 ORF81416 - 0.094 12.9 0.9 0.19 11.9 0.7 1.6 1 1 0 1 1 1 0 Anticodon-binding domain OKR_DC_1_C PF03711.15 ORF81416 - 0.15 12.3 0.6 0.38 11.1 0.4 1.7 1 1 1 2 2 2 0 Orn/Lys/Arg decarboxylase, C-terminal domain QslA_E PF18226.1 ORF81416 - 0.24 11.3 3.5 8.9 6.3 0.1 3.2 1 1 2 3 3 3 0 LasR-specific antiactivator QslA chain E HTH_Tnp_ISL3 PF13542.6 ORF81416 - 0.4 10.1 1.7 5 6.6 0.1 3.0 3 1 0 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 DUF3235 PF11574.8 ORF81416 - 0.76 10.7 3.0 26 5.7 0.2 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3235) SinI PF08671.10 ORF81416 - 7.9 6.4 12.7 38 4.2 0.1 4.9 5 0 0 5 5 5 0 Anti-repressor SinI C_tripleX PF02363.19 ORF80840 - 0.31 11.4 0.5 0.31 11.4 0.5 3.3 4 0 0 4 4 4 0 Cysteine rich repeat Beta_helix PF13229.6 ORF80648 - 6e-17 61.9 12.9 9.1e-17 61.4 12.9 1.2 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 ORF80648 - 6.7e-14 51.7 10.6 8.6e-14 51.4 10.6 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Disaggr_assoc PF08480.10 ORF80648 - 0.0013 18.7 6.5 0.002 18.0 6.5 1.3 1 1 0 1 1 1 1 Disaggregatase related MAM33 PF02330.16 ORF79749 - 3.2e-15 56.7 3.2 3.7e-15 56.5 3.2 1.0 1 0 0 1 1 1 1 Mitochondrial glycoprotein Amb_V_allergen PF03913.13 ORF78856 - 5 7.1 6.9 1.4 8.9 0.5 2.1 2 0 0 2 2 2 0 Amb V Allergen LPD23 PF18838.1 ORF78216 - 0.035 13.9 0.4 0.057 13.2 0.4 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 23 DUF5320 PF17253.2 ORF78201 - 3.2 8.9 5.8 1.1 10.4 2.9 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5320) CENP-H PF05837.12 ORF77859 - 0.016 15.6 6.0 0.016 15.6 6.0 1.6 2 0 0 2 2 2 0 Centromere protein H (CENP-H) SMYLE_N PF18615.1 ORF77859 - 0.028 14.0 3.1 0.037 13.6 3.1 1.1 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain LuxC PF05893.14 ORF77859 - 0.042 12.9 0.8 0.053 12.6 0.8 1.1 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) DUF520 PF04461.13 ORF77859 - 0.46 10.6 8.3 0.22 11.6 0.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF520) DUF819 PF05684.12 ORF77780 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) Proteasom_PSMB PF10508.9 ORF76793 - 0.02 13.4 0.1 0.026 13.1 0.1 1.1 1 0 0 1 1 1 0 Proteasome non-ATPase 26S subunit pP_pnuc_2 PF18166.1 ORF75351 - 0.042 13.9 0.0 0.063 13.3 0.0 1.2 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease EbsA PF17255.2 ORF74132 - 0.022 15.1 0.6 0.022 15.1 0.6 1.7 2 0 0 2 2 2 0 EbsA-like protein PA14 PF07691.12 ORF71317 - 3.2e-15 56.2 0.0 3.7e-15 56.0 0.0 1.0 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 ORF71317 - 0.0078 16.6 0.0 0.013 15.9 0.0 1.5 1 1 0 1 1 1 1 GLEYA domain EamA PF00892.20 ORF71186 - 0.0015 18.7 9.5 0.0034 17.5 9.5 1.6 1 1 0 1 1 1 1 EamA-like transporter family HpaB PF03241.13 ORF6969 - 0.23 10.5 0.0 0.39 9.8 0.0 1.3 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase C terminal BDV_P40 PF06407.11 ORF69251 - 0.024 13.8 0.3 0.032 13.3 0.3 1.2 1 0 0 1 1 1 0 Borna disease virus P40 protein YtpI PF14007.6 ORF68622 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF68622 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter NDK PF00334.19 ORF65913 - 2.1e-54 183.2 0.0 2.4e-54 183.0 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase zf-C2H2_3 PF13878.6 ORF64387 - 0.0018 18.1 0.1 0.0018 18.1 0.1 2.0 3 0 0 3 3 3 1 zinc-finger of acetyl-transferase ESCO AbfS_sensor PF18225.1 ORF64016 - 0.085 12.8 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain YjbE PF11106.8 ORF62260 - 6.4 7.1 9.0 0.41 10.9 2.8 1.9 2 0 0 2 2 2 0 Exopolysaccharide production protein YjbE Croc_4 PF17691.1 ORF62083 - 1.4 8.9 6.1 2.4 8.2 1.9 2.1 1 1 1 2 2 2 0 Contingent replication of cDNA 4 CcmH PF03918.14 ORF61742 - 2.3e-41 140.5 7.9 5.9e-41 139.1 7.9 1.6 1 1 0 1 1 1 1 Cytochrome C biogenesis protein DUF4381 PF14316.6 ORF61742 - 0.08 13.2 2.0 0.21 11.9 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Phage_base_V PF04717.12 ORF61742 - 0.11 12.4 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks164.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks164.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks164.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks164.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:11:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aldo_ket_red PF00248.21 ORF60326 - 1.9e-08 33.9 0.0 1.9e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family DUF1413 PF07205.11 ORF60326 - 0.14 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1413) Pkinase PF00069.25 ORF60151 - 4.4e-06 26.2 0.0 6.3e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain YtpI PF14007.6 ORF58789 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF58789 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter DUF2076 PF09849.9 ORF57953 - 0.05 13.6 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) PsbH PF00737.20 ORF56754 - 7.1e-07 28.9 0.4 1.2e-06 28.1 0.4 1.4 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 ORF56754 - 0.036 13.8 0.9 0.059 13.1 0.4 1.6 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ycf70 PF17382.2 ORF56754 - 0.071 13.5 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Sdh_cyt PF01127.22 ORF56754 - 0.11 12.5 0.0 0.24 11.4 0.0 1.5 2 0 0 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SET PF00856.28 ORF56426 - 0.19 12.1 0.3 0.46 10.8 0.2 1.7 2 0 0 2 2 2 0 SET domain ABC_tran PF00005.27 ORF56041 - 1.3e-10 41.9 0.1 2.5e-10 41.0 0.1 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF56041 - 3.1e-05 23.5 0.5 4.1e-05 23.1 0.5 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Amidohydro_1 PF01979.20 ORF53446 - 1.2e-09 37.9 0.0 1.4e-09 37.7 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF53446 - 7.3e-06 25.7 0.0 7.6e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Chisel PF15355.6 ORF53152 - 0.19 12.0 0.0 0.26 11.5 0.0 1.3 1 0 0 1 1 1 0 Stretch-responsive small skeletal muscle X protein, Chisel DUF2076 PF09849.9 ORF51987 - 0.05 13.6 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Complex1_49kDa PF00346.19 ORF49666 - 0.03 13.4 0.7 0.043 12.9 0.7 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Ank_2 PF12796.7 ORF47998 - 2e-10 41.1 0.3 2e-08 34.7 0.7 2.1 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF47998 - 2.6e-08 34.2 0.0 0.00021 21.8 0.0 2.9 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF47998 - 6.9e-08 32.2 0.1 0.088 13.4 0.0 3.7 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF47998 - 5.7e-07 29.7 0.3 0.0036 17.6 0.0 2.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF47998 - 9.4e-06 25.9 0.8 2.7 8.6 0.2 3.9 4 0 0 4 4 4 3 Ankyrin repeat DUF819 PF05684.12 ORF45719 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) FANC_SAP PF18081.1 ORF41603 - 8.3 6.7 7.1 26 5.1 7.1 1.9 1 1 0 1 1 1 0 Fanconi anemia-associated nuclease SAP domain DUF4689 PF15755.5 ORF39680 - 0.04 13.5 1.2 0.065 12.8 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4689) EPF PF17181.4 ORF38184 - 0.09 12.8 0.5 0.17 11.9 0.5 1.5 1 0 0 1 1 1 0 Epidermal patterning factor proteins TMEM239 PF15841.5 ORF37570 - 0.28 11.1 7.6 10 6.0 0.8 3.0 1 1 2 3 3 3 0 Transmembrane protein 239 family Rot1 PF10681.9 ORF37491 - 0.16 11.4 1.2 0.23 11.0 1.0 1.3 1 1 0 1 1 1 0 Chaperone for protein-folding within the ER, fungal Adaptin_binding PF10199.9 ORF37491 - 0.27 11.8 6.4 0.38 11.4 6.4 1.2 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Spectrin PF00435.21 ORF37465 - 0.024 15.1 1.3 0.024 15.1 1.3 1.6 2 0 0 2 2 2 0 Spectrin repeat DUF1289 PF06945.13 ORF35543 - 0.03 14.1 0.4 0.54 10.1 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1289) DUF819 PF05684.12 ORF35398 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) SMAP PF15477.6 ORF35353 - 0.013 16.4 0.1 0.023 15.6 0.1 1.5 1 0 0 1 1 1 0 Small acidic protein family VBS PF08913.10 ORF34739 - 0.0023 18.3 0.0 0.0031 18.0 0.0 1.1 1 0 0 1 1 1 1 Vinculin Binding Site DUF924 PF06041.11 ORF34562 - 4.7e-39 134.4 0.9 5.5e-39 134.2 0.9 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) YtpI PF14007.6 ORF34527 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF34527 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter GCIP PF13324.6 ORF34436 - 0.0062 16.2 0.3 0.0081 15.8 0.3 1.1 1 0 0 1 1 1 1 Grap2 and cyclin-D-interacting Pkinase PF00069.25 ORF34240 - 0.00028 20.3 0.4 0.00052 19.5 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain PPL5 PF18168.1 ORF3344 - 0.19 11.0 3.8 0.22 10.8 3.8 1.0 1 0 0 1 1 1 0 Prim-pol family 5 SpoIIIAH PF12685.7 ORF3344 - 0.67 9.7 16.3 1.1 9.0 7.4 2.2 1 1 1 2 2 2 0 SpoIIIAH-like protein DUF2934 PF11154.8 ORF33355 - 0.19 11.5 0.2 0.19 11.5 0.2 2.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2934) Dehyd-heme_bind PF09098.10 ORF33268 - 0.013 15.1 1.4 0.02 14.5 1.4 1.3 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding Usher_TcfC PF17271.2 ORF32318 - 0.12 11.2 1.2 0.17 10.7 1.2 1.2 1 0 0 1 1 1 0 TcfC Usher-like barrel domain DUF819 PF05684.12 ORF31716 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) Pentapeptide PF00805.22 ORF30884 - 0.00095 18.8 0.4 0.017 14.8 0.3 2.4 2 0 0 2 2 2 1 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF30884 - 0.0039 17.3 1.2 0.011 15.9 0.6 2.1 2 1 0 2 2 2 1 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF30884 - 0.25 11.5 3.3 0.17 12.1 0.8 2.1 2 1 0 2 2 2 0 Pentapeptide repeats (9 copies) HTH_32 PF13565.6 ORF30228 - 0.1 13.2 0.1 0.2 12.3 0.1 1.5 1 0 0 1 1 1 0 Homeodomain-like domain 4PPT_N PF17837.1 ORF30228 - 0.2 11.8 2.7 0.61 10.3 0.4 2.3 2 1 0 2 2 2 0 4'-phosphopantetheinyl transferase N-terminal domain DUF819 PF05684.12 ORF30211 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) Arf PF00025.21 ORF29428 - 1.8e-49 167.5 0.0 2.2e-49 167.3 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family G-alpha PF00503.20 ORF29428 - 1.7e-09 37.3 0.4 3.6e-09 36.3 0.4 1.3 1 1 0 1 1 1 1 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF29428 - 2.6e-08 33.5 0.0 3.2e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Roc PF08477.13 ORF29428 - 4.2e-08 33.4 0.0 7.1e-08 32.7 0.0 1.4 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF29428 - 2.1e-06 27.3 0.0 2.5e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF29428 - 5.1e-06 26.2 0.0 5.5e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Ras family GTP_EFTU PF00009.27 ORF29428 - 0.0021 17.7 0.0 0.0026 17.3 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF29428 - 0.0073 16.4 0.0 0.0099 16.0 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Vmethyltransf PF01660.17 ORF29428 - 0.24 10.2 0.0 0.3 9.9 0.0 1.1 1 0 0 1 1 1 0 Viral methyltransferase YtpI PF14007.6 ORF27393 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF27393 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter DUF819 PF05684.12 ORF25299 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) ANAPC15 PF15243.6 ORF2495 - 0.13 12.7 3.0 8.6 6.8 0.4 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 15 DUF2300 PF10062.9 ORF2495 - 0.65 10.1 7.6 4.9 7.3 1.4 2.2 2 0 0 2 2 2 0 Predicted secreted protein (DUF2300) CRISPR_assoc PF08798.11 ORF2495 - 2.2 8.3 7.9 1 9.4 0.4 2.1 1 1 0 2 2 2 0 CRISPR associated protein Ribosomal_L28e PF01778.17 ORF23596 - 1.3e-14 55.0 2.2 1.8e-14 54.5 2.2 1.2 1 0 0 1 1 1 1 Ribosomal L28e protein family MORN PF02493.20 ORF23270 - 1.1e-37 125.7 51.8 6.5e-09 35.2 2.2 7.1 7 0 0 7 7 7 7 MORN repeat Tudor_2 PF18104.1 ORF23270 - 0.39 10.4 0.2 0.39 10.4 0.2 5.4 6 1 0 6 6 6 0 Jumonji domain-containing protein 2A Tudor domain DUF523 PF04463.12 ORF23270 - 3.1 7.8 5.4 19 5.3 0.1 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF523) GlpM PF06942.12 ORF22660 - 0.35 11.3 8.6 0.21 12.0 6.4 1.7 2 0 0 2 2 2 0 GlpM protein MAP17 PF15807.5 ORF22620 - 0.082 13.1 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Ifi-6-16 PF06140.13 ORF22620 - 1.8 8.5 6.2 6.2 6.8 4.0 2.4 2 1 0 2 2 2 0 Interferon-induced 6-16 family MmlI PF09448.10 ORF22505 - 0.07 13.6 0.0 0.091 13.2 0.0 1.1 1 0 0 1 1 1 0 Methylmuconolactone methyl-isomerase Phostensin PF13914.6 ORF20697 - 0.069 13.8 0.4 0.095 13.3 0.4 1.2 1 0 0 1 1 1 0 Phostensin PP1-binding and SH3-binding region Neur_chan_memb PF02932.16 ORF20348 - 0.13 12.3 0.6 0.15 12.1 0.6 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Zn_Tnp_IS91 PF14319.6 ORF19831 - 0.93 9.6 5.8 0.87 9.7 0.3 2.4 2 1 0 2 2 2 0 Transposase zinc-binding domain TRP PF06011.12 ORF18720 - 0.016 14.0 7.3 0.019 13.7 7.3 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel 5TM-5TMR_LYT PF07694.12 ORF18720 - 0.025 14.1 2.5 0.035 13.6 2.5 1.3 1 0 0 1 1 1 0 5TMR of 5TMR-LYT pP_pnuc_2 PF18166.1 ORF18495 - 0.042 13.9 0.0 0.063 13.3 0.0 1.2 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease DUF4689 PF15755.5 ORF17899 - 0.04 13.5 1.2 0.065 12.8 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4689) YtpI PF14007.6 ORF17359 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF17359 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter Pacifastin_I PF05375.13 ORF16433 - 0.084 12.6 0.4 0.16 11.7 0.4 1.4 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) MerR-DNA-bind PF09278.11 ORF1540 - 5.3e-15 55.7 0.1 9.1e-15 54.9 0.1 1.4 1 0 0 1 1 1 1 MerR, DNA binding MerR PF00376.23 ORF1540 - 6.5e-14 51.4 0.4 1.5e-13 50.2 0.1 1.8 2 0 0 2 2 2 1 MerR family regulatory protein MerR_1 PF13411.6 ORF1540 - 3.1e-11 43.2 0.0 5.2e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_3 PF01381.22 ORF1540 - 0.031 14.3 0.1 0.94 9.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix DUF2670 PF10875.8 ORF1540 - 0.047 13.8 0.0 0.073 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) TPP_enzyme_M PF00205.22 ORF1540 - 0.12 12.1 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain DUF4559 PF15112.6 ORF15342 - 0.064 12.9 1.1 0.094 12.4 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Basic PF01586.16 ORF152673 - 0.19 12.9 1.0 0.26 12.5 0.1 1.7 2 0 0 2 2 2 0 Myogenic Basic domain PROL5-SMR PF15621.6 ORF152380 - 0.048 14.2 0.6 0.093 13.3 0.5 1.6 1 1 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Ion_trans PF00520.31 ORF151828 - 0.027 13.7 0.1 0.034 13.4 0.1 1.2 1 0 0 1 1 1 0 Ion transport protein RasGAP PF00616.19 ORF151828 - 0.063 13.0 0.1 0.14 11.9 0.0 1.5 2 0 0 2 2 2 0 GTPase-activator protein for Ras-like GTPase DUF2142 PF09913.9 ORF151234 - 0.73 8.6 1.1 0.94 8.3 1.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) DUF3835 PF12927.7 ORF151234 - 3.1 8.7 9.5 7.2 7.5 2.6 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF3835) MyTH4 PF00784.17 ORF150786 - 0.11 13.0 12.1 0.75 10.3 1.4 3.3 2 1 2 4 4 4 0 MyTH4 domain Glyco_transf_22 PF03901.17 ORF150628 - 0.046 12.9 0.8 0.055 12.7 0.8 1.0 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family DUF2076 PF09849.9 ORF149157 - 0.05 13.6 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) YtpI PF14007.6 ORF148957 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF148957 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter Ribosomal_S27 PF01599.19 ORF148628 - 2.3 8.5 4.0 9.1 6.5 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein S27a DUF819 PF05684.12 ORF147084 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) DUF819 PF05684.12 ORF145489 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) DUF819 PF05684.12 ORF144935 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) NOA36 PF06524.12 ORF1449 - 1.3 8.3 12.8 2.1 7.6 12.8 1.3 1 0 0 1 1 1 0 NOA36 protein FAM60A PF15396.6 ORF1449 - 2.9 7.8 8.1 4 7.4 8.1 1.2 1 0 0 1 1 1 0 Protein Family FAM60A CDC45 PF02724.14 ORF1449 - 3.1 6.0 11.3 3.2 5.9 11.3 1.1 1 0 0 1 1 1 0 CDC45-like protein EPF PF17181.4 ORF14360 - 0.09 12.8 0.5 0.17 11.9 0.5 1.5 1 0 0 1 1 1 0 Epidermal patterning factor proteins Ion_trans PF00520.31 ORF142967 - 0.027 13.7 0.1 0.034 13.4 0.1 1.2 1 0 0 1 1 1 0 Ion transport protein RasGAP PF00616.19 ORF142967 - 0.063 13.0 0.1 0.14 11.9 0.0 1.5 2 0 0 2 2 2 0 GTPase-activator protein for Ras-like GTPase YtpI PF14007.6 ORF142519 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF142519 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter SHIPPO-rpt PF07004.12 ORF142280 - 0.17 12.9 6.4 0.41 11.6 0.2 3.1 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat Ntox17 PF15524.6 ORF142256 - 0.0013 19.0 0.0 0.0019 18.4 0.0 1.3 1 0 0 1 1 1 1 Novel toxin 17 Hormone_6 PF00236.18 ORF140298 - 0.11 12.5 0.5 0.18 11.8 0.5 1.2 1 0 0 1 1 1 0 Glycoprotein hormone Neur_chan_memb PF02932.16 ORF139099 - 0.13 12.3 0.6 0.15 12.1 0.6 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region TRP PF06011.12 ORF136420 - 0.00012 20.9 7.6 0.00015 20.7 7.6 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel 5TM-5TMR_LYT PF07694.12 ORF136420 - 0.011 15.3 2.8 0.014 14.9 2.8 1.2 1 0 0 1 1 1 0 5TMR of 5TMR-LYT UPF0114 PF03350.16 ORF136420 - 0.013 15.7 1.4 0.018 15.3 1.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 DUF2423 PF10338.9 ORF136420 - 0.073 13.3 2.4 0.14 12.4 2.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2423) SPC25 PF06703.11 ORF136420 - 0.18 11.6 5.5 0.28 11.0 5.5 1.3 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Sigma_reg_N PF13800.6 ORF136420 - 2.5 8.5 10.2 0.62 10.4 1.4 3.3 1 1 2 3 3 3 0 Sigma factor regulator N-terminal GWT1 PF06423.12 ORF136105 - 0.18 11.9 0.6 0.25 11.5 0.6 1.3 1 1 0 1 1 1 0 GWT1 Vps54_N PF10475.9 ORF135252 - 0.021 14.2 5.5 0.024 13.9 5.5 1.2 1 0 0 1 1 1 0 Vacuolar-sorting protein 54, of GARP complex Acyl-CoA_dh_2 PF08028.11 ORF135252 - 0.11 12.8 0.9 0.15 12.3 0.9 1.2 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain Syntaxin-6_N PF09177.11 ORF135252 - 0.71 10.5 6.6 3.5 8.2 6.6 2.2 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF4446 PF14584.6 ORF135252 - 3.3 7.7 11.5 0.26 11.3 0.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF819 PF05684.12 ORF135145 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) EPF PF17181.4 ORF130709 - 0.011 15.7 5.1 0.024 14.7 5.1 1.6 1 0 0 1 1 1 0 Epidermal patterning factor proteins TRAP_alpha PF03896.16 ORF130583 - 0.21 10.7 8.8 0.25 10.5 8.8 1.2 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Sigma70_ner PF04546.13 ORF130583 - 0.29 11.0 12.8 0.41 10.5 12.8 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region Sporozoite_P67 PF05642.11 ORF130583 - 0.39 8.7 9.2 0.46 8.5 9.2 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Herpes_LMP1 PF05297.11 ORF130583 - 1.1 8.3 2.3 1.3 8.2 2.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) AIF_C PF14721.6 ORF130583 - 2.7 8.4 9.6 2 8.8 8.1 1.5 1 1 1 2 2 2 0 Apoptosis-inducing factor, mitochondrion-associated, C-term DUF819 PF05684.12 ORF130441 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) Aminotran_1_2 PF00155.21 ORF129085 - 8e-05 22.0 0.0 9.4e-05 21.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PTS_EIIA_2 PF00359.22 ORF128269 - 9.5e-34 116.4 0.0 1.1e-33 116.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EOS1 PF12326.8 ORF127539 - 0.17 11.8 1.4 0.22 11.4 1.4 1.2 1 0 0 1 1 1 0 N-glycosylation protein DUF2244 PF10003.9 ORF127539 - 1.7 8.3 3.9 6.2 6.5 2.9 1.9 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) DUF819 PF05684.12 ORF126503 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) YtpI PF14007.6 ORF124229 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF124229 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter YtpI PF14007.6 ORF123405 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF123405 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter AAA_13 PF13166.6 ORF122835 - 0.00039 19.2 7.3 0.00042 19.1 7.3 1.0 1 0 0 1 1 1 1 AAA domain PIN_8 PF18476.1 ORF122835 - 0.016 15.0 6.3 0.018 14.9 6.3 1.1 1 0 0 1 1 1 0 PIN like domain DUF1910 PF08928.10 ORF122835 - 0.077 13.0 5.1 0.18 11.8 5.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF1910) CorA PF01544.18 ORF122835 - 0.21 10.9 2.3 0.25 10.6 2.3 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein CdvA PF18822.1 ORF122835 - 0.29 11.0 10.1 0.15 11.9 5.4 2.0 1 1 1 2 2 2 0 CdvA-like coiled-coil domain DUF883 PF05957.13 ORF122835 - 0.3 11.7 1.1 0.69 10.6 1.0 1.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Exonuc_VII_L PF02601.15 ORF122835 - 0.37 10.3 4.7 0.39 10.2 4.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF1515 PF07439.11 ORF122835 - 0.44 10.6 2.6 0.67 10.0 2.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) Ead_Ea22 PF13935.6 ORF122835 - 0.62 10.7 6.0 0.81 10.3 0.5 2.0 2 0 0 2 2 2 0 Ead/Ea22-like protein Fzo_mitofusin PF04799.13 ORF122835 - 1.6 8.3 7.3 1.2 8.7 3.2 1.9 1 1 1 2 2 2 0 fzo-like conserved region TMPIT PF07851.13 ORF122835 - 3.1 7.0 9.2 3.7 6.7 8.3 1.5 1 1 1 2 2 2 0 TMPIT-like protein zf-C2H2_3 PF13878.6 ORF122573 - 0.0018 18.1 0.1 0.0018 18.1 0.1 2.0 3 0 0 3 3 3 1 zinc-finger of acetyl-transferase ESCO YtpI PF14007.6 ORF122441 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF122441 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter PA14 PF07691.12 ORF121883 - 3.2e-15 56.2 0.0 3.7e-15 56.0 0.0 1.0 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 ORF121883 - 0.0078 16.6 0.0 0.013 15.9 0.0 1.5 1 1 0 1 1 1 1 GLEYA domain YtpI PF14007.6 ORF121807 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF121807 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter DUF819 PF05684.12 ORF121237 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) Toxin_20 PF08089.11 ORF120990 - 0.071 13.2 3.5 0.14 12.3 3.3 1.7 1 1 0 1 1 1 0 Huwentoxin-II family zf-UBP PF02148.19 ORF117929 - 0.018 15.4 5.9 0.28 11.6 5.9 2.4 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein zf-C3HC4_3 PF13920.6 ORF117929 - 0.078 12.8 0.6 0.078 12.8 0.6 3.1 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DDE_Tnp_IS66 PF03050.14 ORF117929 - 0.099 12.1 1.7 0.12 11.8 1.7 1.2 1 0 0 1 1 1 0 Transposase IS66 family zf-RING_14 PF17978.1 ORF117929 - 0.81 10.2 5.6 0.62 10.5 0.2 2.4 2 1 1 3 3 3 0 RING/Ubox like zinc-binding domain PPR_2 PF13041.6 ORF115533 - 5.1e-05 23.4 0.0 3.5 7.9 0.0 3.8 2 1 2 4 4 4 3 PPR repeat family PPR PF01535.20 ORF115533 - 0.0014 18.8 0.0 7.2 7.1 0.0 3.7 3 1 0 3 3 3 2 PPR repeat TPR_7 PF13176.6 ORF115533 - 0.0071 16.3 0.1 0.59 10.3 0.0 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat DUF2660 PF10859.8 ORF115533 - 0.065 13.7 0.1 0.22 12.0 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2660) Borrelia_REV PF03978.13 ORF115533 - 0.083 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Borrelia burgdorferi REV protein EpuA PF11772.8 ORF115533 - 0.13 12.0 0.0 23 4.8 0.0 2.4 2 0 0 2 2 2 0 DNA-directed RNA polymerase subunit beta Zn_Tnp_IS91 PF14319.6 ORF114984 - 0.93 9.6 5.8 0.87 9.7 0.3 2.4 2 1 0 2 2 2 0 Transposase zinc-binding domain TIR_3 PF18567.1 ORF114708 - 0.018 15.1 0.2 0.031 14.3 0.2 1.3 1 0 0 1 1 1 0 Toll/interleukin-1 receptor domain BicD PF09730.9 ORF114528 - 0.0032 16.0 0.9 0.0039 15.7 0.9 1.0 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D Fez1 PF06818.15 ORF114528 - 0.057 13.9 2.2 0.079 13.4 2.2 1.2 1 0 0 1 1 1 0 Fez1 Cep57_CLD_2 PF14197.6 ORF114528 - 0.14 12.2 7.4 0.23 11.6 2.2 2.1 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 DUF2262 PF10020.9 ORF114172 - 0.023 15.1 0.2 0.033 14.6 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) Phage_integrase PF00589.22 ORF113469 - 7.7e-30 103.9 0.0 8.8e-30 103.7 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family Ank_5 PF13857.6 ORF113408 - 2.2e-07 31.0 0.0 4.1e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF113408 - 5.9e-06 26.8 0.0 9.6e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF113408 - 2.1e-05 24.6 0.0 0.0004 20.6 0.0 2.7 3 1 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF113408 - 9.7e-05 22.7 0.0 0.0015 18.9 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 ORF113408 - 0.021 15.4 0.0 0.035 14.7 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeats (many copies) zf-B_box PF00643.24 ORF113408 - 0.081 13.1 8.6 0.19 11.9 7.0 2.2 2 0 0 2 2 2 0 B-box zinc finger TBCA PF02970.16 ORF113133 - 0.0048 17.2 2.2 0.0055 17.0 0.5 1.9 2 1 0 2 2 2 1 Tubulin binding cofactor A SWC7 PF17330.2 ORF113133 - 0.018 15.1 0.6 0.026 14.6 0.6 1.4 1 1 0 1 1 1 0 SWR1 chromatin-remodelling complex, sub-unit Swc7 APC_u15 PF16636.5 ORF113133 - 5.3 7.5 8.4 6.2 7.3 0.3 2.5 1 1 2 3 3 3 0 Unstructured region on APC between APC_crr regions 5 and 6 PAP2 PF01569.21 ORF109060 - 0.025 14.4 0.6 0.025 14.4 0.6 1.6 2 0 0 2 2 2 0 PAP2 superfamily YtpI PF14007.6 ORF107788 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF107788 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter Rft-1 PF04506.13 ORF107145 - 0.2 10.3 0.0 0.22 10.2 0.0 1.1 1 0 0 1 1 1 0 Rft protein DUF819 PF05684.12 ORF106869 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) Chordopox_A13L PF05961.11 ORF106156 - 0.072 13.3 0.5 0.19 12.0 0.5 2.0 1 1 0 1 1 1 0 Chordopoxvirus A13L protein ASC PF00858.24 ORF105816 - 0.01 14.8 0.2 0.012 14.6 0.2 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel GlpM PF06942.12 ORF105510 - 0.38 11.2 8.7 0.21 12.0 6.4 1.7 2 0 0 2 2 2 0 GlpM protein Nucleoporin_FG2 PF15967.5 ORF105251 - 0.22 10.0 3.2 0.27 9.7 3.2 1.1 1 0 0 1 1 1 0 Nucleoporin FG repeated region DUF1768 PF08719.11 ORF104549 - 1.4e-35 122.9 0.3 1.6e-35 122.7 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) DUF5046 PF16465.5 ORF104194 - 0.062 12.7 0.0 0.077 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5046) DUF819 PF05684.12 ORF103494 - 0.1 11.6 0.8 0.13 11.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) YtpI PF14007.6 ORF103364 - 0.0066 16.6 0.1 2.5 8.3 0.0 2.5 3 0 0 3 3 3 2 YtpI-like protein Zip PF02535.22 ORF103364 - 0.028 13.7 0.4 0.045 13.0 0.2 1.4 1 1 0 1 1 1 0 ZIP Zinc transporter MMS19_N PF14500.6 ORF101596 - 0.0059 16.2 0.1 0.1 12.1 0.0 2.0 2 0 0 2 2 2 1 Dos2-interacting transcription regulator of RNA-Pol-II DUF5624 PF18538.1 ORF101596 - 0.02 15.0 0.3 2.2 8.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5624) Cnd1 PF12717.7 ORF101596 - 0.041 13.9 1.7 0.12 12.4 0.2 2.3 1 1 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 YmgB PF10798.8 ORF101596 - 0.08 12.8 2.7 4.9 7.0 0.1 2.4 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR Luciferase_N PF05295.11 ORF101596 - 0.15 12.1 0.2 1.4 9.0 0.0 2.5 2 1 1 3 3 3 0 Luciferase/LBP N-terminal domain Pentapeptide PF00805.22 ORF101515 - 0.00095 18.8 0.4 0.017 14.8 0.3 2.4 2 0 0 2 2 2 1 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF101515 - 0.0039 17.3 1.2 0.011 15.9 0.6 2.1 2 1 0 2 2 2 1 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF101515 - 0.25 11.5 3.3 0.17 12.1 0.8 2.1 2 1 0 2 2 2 0 Pentapeptide repeats (9 copies) AA_kinase PF00696.28 ORF10084 - 1.8e-18 67.0 0.0 2e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family ABC2_membrane_3 PF12698.7 NODE_43764_length_457_cov_2.701422_g36062_i0reverse_frame_1 - 0.99 8.4 5.7 1.3 8.1 5.7 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein RhaT PF06379.12 NODE_43762_length_457_cov_3.161137_g36060_i0reverse_frame_1 - 0.067 12.4 0.1 0.1 11.8 0.1 1.3 1 0 0 1 1 1 0 L-rhamnose-proton symport protein (RhaT) LamB PF02264.15 NODE_43759_length_457_cov_4.222749_g36057_i0reverse_frame_1 - 3e-19 70.2 1.7 4e-19 69.8 1.7 1.2 1 0 0 1 1 1 1 LamB porin DUF2626 PF11117.8 NODE_43756_length_457_cov_35.445498_g36054_i0reverse_frame_1 - 0.03 15.0 0.4 0.055 14.2 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2626) SNCAIP_SNCA_bd PF16700.5 NODE_43744_length_457_cov_70.684834_g36042_i0reverse_frame_1 - 0.042 13.6 0.3 7 6.5 0.1 2.4 2 0 0 2 2 2 0 Synphilin-1 alpha-Synuclein-binding domain DUF4773 PF15998.5 NODE_43743_length_457_cov_81.954976_g36041_i0forward_frame_1 - 0.12 12.9 0.7 0.21 12.1 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4773) KAAG1 PF15354.6 NODE_43734_length_457_cov_133.184834_g36032_i0forward_frame_1 - 0.07 13.7 0.1 0.11 13.0 0.1 1.2 1 0 0 1 1 1 0 Kidney-associated antigen 1 PSI_PsaE PF02427.17 NODE_43718_length_457_cov_2502.132701_g34665_i5reverse_frame_1 - 5.6e-24 83.6 1.3 7.5e-24 83.2 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE Bac_GDH PF05088.12 NODE_43713_length_458_cov_2.078014_g36014_i0reverse_frame_1 - 0.016 12.8 0.4 0.018 12.5 0.4 1.0 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase Herpes_Helicase PF02689.14 NODE_43713_length_458_cov_2.078014_g36014_i0reverse_frame_1 - 0.024 12.6 0.0 0.027 12.4 0.0 1.0 1 0 0 1 1 1 0 Helicase Plug PF07715.15 NODE_43711_length_458_cov_2.359338_g36012_i0forward_frame_1 - 3e-09 37.4 0.1 4.8e-09 36.7 0.1 1.4 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain TMEM40 PF15817.5 NODE_43701_length_458_cov_17.217494_g36002_i0forward_frame_1 - 0.56 10.0 3.5 0.85 9.4 3.3 1.4 1 1 0 1 1 1 0 Transmembrane protein 40 family UBX PF00789.20 NODE_43700_length_458_cov_31.565012_g36001_i0forward_frame_1 - 7.8e-09 35.6 0.1 5e-08 33.0 0.0 2.2 2 1 0 2 2 2 1 UBX domain FtsK_4TM PF13491.6 NODE_43694_length_458_cov_83.000000_g35995_i0forward_frame_1 - 0.13 12.0 1.3 0.16 11.6 1.3 1.1 1 0 0 1 1 1 0 4TM region of DNA translocase FtsK/SpoIIIE Arrestin_N PF00339.29 NODE_43688_length_458_cov_92.777778_g35989_i0reverse_frame_1 - 7.3e-07 29.4 0.2 8.8e-07 29.1 0.2 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 NODE_43688_length_458_cov_92.777778_g35989_i0reverse_frame_1 - 0.019 14.6 0.1 0.023 14.4 0.1 1.2 1 0 0 1 1 1 0 Arrestin_N terminal like BCLP PF12304.8 NODE_43688_length_458_cov_92.777778_g35989_i0reverse_frame_1 - 0.069 12.7 0.5 0.092 12.3 0.5 1.1 1 0 0 1 1 1 0 Beta-casein like protein DUF262 PF03235.14 NODE_43674_length_458_cov_138.531915_g23325_i1reverse_frame_1 - 0.87 9.7 13.5 1 9.5 13.5 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF262 Thioredoxin PF00085.20 NODE_43667_length_458_cov_211.021277_g35969_i0forward_frame_1 - 3.4e-10 39.8 0.0 5.2e-10 39.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 NODE_43667_length_458_cov_211.021277_g35969_i0forward_frame_1 - 0.0066 15.8 0.2 0.0066 15.8 0.2 2.0 1 1 1 2 2 2 1 OST3 / OST6 family, transporter family Fumarate_red_C PF02300.17 NODE_43667_length_458_cov_211.021277_g35969_i0forward_frame_1 - 0.041 14.0 0.4 0.058 13.5 0.4 1.2 1 0 0 1 1 1 0 Fumarate reductase subunit C Thioredoxin_2 PF13098.6 NODE_43667_length_458_cov_211.021277_g35969_i0forward_frame_1 - 0.11 13.0 0.1 0.17 12.3 0.1 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain DUF1676 PF07898.13 NODE_43651_length_459_cov_2.558962_g35955_i0forward_frame_1 - 0.00028 21.0 0.6 0.00035 20.7 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1676) DUF5383 PF17355.2 NODE_43651_length_459_cov_2.558962_g35955_i0forward_frame_1 - 0.085 13.2 0.0 0.098 13.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5383) ETRAMP PF09716.10 NODE_43651_length_459_cov_2.558962_g35955_i0forward_frame_1 - 0.1 12.7 0.2 0.19 11.8 0.2 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF2207 PF09972.9 NODE_43651_length_459_cov_2.558962_g35955_i0forward_frame_1 - 0.13 11.0 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5068 PF16781.5 NODE_43645_length_459_cov_2.870283_g35949_i0forward_frame_1 - 0.17 11.7 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5068) zf-C2HE PF16278.5 NODE_43640_length_459_cov_15.577830_g35944_i0reverse_frame_1 - 0.046 14.2 0.3 0.046 14.2 0.3 2.4 3 0 0 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger EF-hand_6 PF13405.6 NODE_43635_length_459_cov_54.294811_g35939_i0reverse_frame_1 - 0.012 15.5 0.0 0.058 13.3 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 NODE_43635_length_459_cov_54.294811_g35939_i0reverse_frame_1 - 0.079 12.6 0.1 0.44 10.2 0.0 2.1 2 0 0 2 2 2 0 EF hand EF-hand_13 PF17958.1 NODE_43635_length_459_cov_54.294811_g35939_i0reverse_frame_1 - 0.11 12.3 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain PA14 PF07691.12 NODE_43627_length_459_cov_88.518868_g35932_i0forward_frame_1 - 2.2e-11 43.8 0.0 2.8e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 NODE_43627_length_459_cov_88.518868_g35932_i0forward_frame_1 - 0.035 14.5 0.0 0.046 14.1 0.0 1.2 1 0 0 1 1 1 0 GLEYA domain Chordopox_E11 PF06138.12 NODE_43623_length_459_cov_95.113208_g35929_i0forward_frame_1 - 0.25 11.7 0.0 0.38 11.1 0.0 1.2 1 0 0 1 1 1 0 Chordopoxvirus E11 protein FAM194 PF14977.6 NODE_43618_length_459_cov_113.540094_g35924_i0forward_frame_1 - 0.017 14.5 0.0 0.022 14.1 0.0 1.1 1 0 0 1 1 1 0 FAM194 protein PPR_2 PF13041.6 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 1.6e-14 53.8 0.0 1e-06 28.8 0.0 3.2 1 1 3 4 4 4 4 PPR repeat family PPR_3 PF13812.6 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 3.1e-08 33.6 0.0 0.00021 21.3 0.0 2.2 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 3.2e-07 30.1 0.0 0.59 10.5 0.0 3.2 3 0 0 3 3 3 3 PPR repeat PPR_1 PF12854.7 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.0024 17.5 0.0 0.61 9.8 0.0 3.2 4 1 0 4 4 4 1 PPR repeat PPR_long PF17177.4 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.021 14.2 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP TPR_14 PF13428.6 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.023 15.5 4.8 0.64 11.0 0.0 3.0 2 2 1 3 3 3 0 Tetratricopeptide repeat Clathrin PF00637.20 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.087 12.7 0.0 4.3 7.2 0.0 2.5 1 1 0 1 1 1 0 Region in Clathrin and VPS HrpB1_HrpK PF09613.10 NODE_43614_length_459_cov_127.547170_g35920_i0forward_frame_1 - 0.16 11.6 5.5 0.54 9.9 3.2 2.3 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) Med3 PF11593.8 NODE_43607_length_459_cov_191.224057_g35913_i0forward_frame_1 - 1.2 8.2 3.4 1.6 7.8 3.4 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Gly-rich_Ago1 PF12764.7 NODE_43583_length_460_cov_2.442353_g35893_i0reverse_frame_2 - 0.013 16.3 0.1 0.021 15.6 0.1 1.3 1 0 0 1 1 1 0 Glycine-rich region of argonaut KAR9 PF08580.10 NODE_43580_length_460_cov_3.320000_g35890_i0reverse_frame_2 - 0.85 8.1 2.7 0.85 8.1 2.7 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 YidD PF01809.18 NODE_43576_length_460_cov_6.218824_g35886_i0forward_frame_3 - 0.0041 17.0 0.7 0.0096 15.8 0.7 1.6 1 0 0 1 1 1 1 Putative membrane protein insertion efficiency factor PP2 PF14299.6 NODE_43576_length_460_cov_6.218824_g35886_i0forward_frame_3 - 0.019 15.0 0.1 0.027 14.5 0.1 1.3 1 0 0 1 1 1 0 Phloem protein 2 Endonuclease_1 PF04231.13 NODE_43576_length_460_cov_6.218824_g35886_i0forward_frame_3 - 0.075 12.7 0.0 0.099 12.3 0.0 1.3 1 0 0 1 1 1 0 Endonuclease I KdgM PF06178.13 NODE_43576_length_460_cov_6.218824_g35886_i0forward_frame_3 - 0.11 12.1 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 Oligogalacturonate-specific porin protein (KdgM) Ofd1_CTDD PF10637.9 NODE_43568_length_460_cov_83.715294_g35878_i0reverse_frame_3 - 0.00049 19.5 0.0 0.00066 19.1 0.0 1.2 1 0 0 1 1 1 1 Oxoglutarate and iron-dependent oxygenase degradation C-term Bromo_coat PF01318.18 NODE_43567_length_460_cov_84.809412_g35877_i0reverse_frame_2 - 0.045 13.8 0.1 0.055 13.5 0.1 1.1 1 0 0 1 1 1 0 Bromovirus coat protein NCD1 PF04904.13 NODE_43567_length_460_cov_84.809412_g35877_i0forward_frame_2 - 0.089 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 NAB conserved region 1 (NCD1) Abhydrolase_1 PF00561.20 NODE_43564_length_460_cov_93.223529_g35874_i0reverse_frame_2 - 0.14 11.7 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold TAP35_44 PF07265.11 NODE_43552_length_460_cov_172.348235_g35862_i0reverse_frame_2 - 0.016 15.2 0.4 0.02 14.9 0.4 1.1 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 TnpV PF14198.6 NODE_43552_length_460_cov_172.348235_g35862_i0reverse_frame_2 - 0.024 14.6 0.4 0.024 14.6 0.4 2.3 1 1 1 2 2 2 0 Transposon-encoded protein TnpV Ndc1_Nup PF09531.10 NODE_43548_length_460_cov_345.562353_g35858_i0forward_frame_3 - 0.27 9.9 13.8 0.37 9.4 13.8 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Flavin_Reduct PF01613.18 NODE_43546_length_460_cov_581.056471_g35856_i0reverse_frame_2 - 0.085 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Flavin reductase like domain Polysacc_synt_3 PF13440.6 NODE_43536_length_461_cov_1.699531_g35850_i0forward_frame_3 - 8.3e-38 130.3 7.5 9.7e-38 130.0 7.5 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 NODE_43536_length_461_cov_1.699531_g35850_i0forward_frame_3 - 4.9e-13 49.1 8.6 5.7e-13 48.9 8.6 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein DUF1189 PF06691.11 NODE_43536_length_461_cov_1.699531_g35850_i0forward_frame_3 - 0.058 13.0 12.6 0.074 12.6 12.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) baeRF_family12 PF18856.1 NODE_43527_length_461_cov_2.612676_g35841_i0reverse_frame_2 - 2.1 8.9 4.3 5.1 7.7 0.3 2.5 2 1 1 3 3 3 0 Bacterial archaeo-eukaryotic release factor family 12 Pdase_M17_N2 PF18295.1 NODE_43526_length_461_cov_2.657277_g35840_i0reverse_frame_2 - 0.088 13.1 0.7 0.14 12.4 0.6 1.5 1 1 0 1 1 1 0 M17 aminopeptidase N-terminal domain 2 SET PF00856.28 NODE_43526_length_461_cov_2.657277_g35840_i0forward_frame_3 - 0.00036 21.0 0.0 0.00047 20.6 0.0 1.2 1 0 0 1 1 1 1 SET domain DUF859 PF05895.12 NODE_43522_length_461_cov_3.312207_g35836_i0forward_frame_3 - 0.0059 15.2 0.0 0.007 14.9 0.0 1.0 1 0 0 1 1 1 1 Siphovirus protein of unknown function (DUF859) DUF1929 PF09118.11 NODE_43521_length_461_cov_3.664319_g35835_i0reverse_frame_3 - 0.096 13.0 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1929) ESCRT-II PF05871.12 NODE_43520_length_461_cov_3.732394_g35834_i0reverse_frame_3 - 0.19 12.0 1.2 0.55 10.5 1.2 1.7 1 1 0 1 1 1 0 ESCRT-II complex subunit MCM_N PF14551.6 NODE_43516_length_461_cov_47.992958_g35831_i0reverse_frame_3 - 0.14 12.8 3.8 1.8 9.2 0.2 2.2 2 0 0 2 2 2 0 MCM N-terminal domain BCNT PF07572.12 NODE_43515_length_461_cov_63.899061_g35830_i0reverse_frame_2 - 3.1e-13 49.6 0.1 6.2e-13 48.6 0.1 1.5 1 0 0 1 1 1 1 Bucentaur or craniofacial development LEA_5 PF00477.17 NODE_43503_length_461_cov_86.305164_g35819_i0reverse_frame_3 - 0.061 13.8 1.7 0.21 12.1 0.2 2.0 1 1 0 2 2 2 0 Small hydrophilic plant seed protein SNARE PF05739.19 NODE_43499_length_461_cov_94.145540_g35815_i0forward_frame_2 - 3.5e-08 33.3 3.4 4.5e-08 33.0 0.2 2.5 1 1 1 2 2 2 1 SNARE domain Synaptobrevin PF00957.21 NODE_43499_length_461_cov_94.145540_g35815_i0forward_frame_2 - 0.0094 15.7 0.3 0.014 15.1 0.3 1.3 1 0 0 1 1 1 1 Synaptobrevin Amnionless PF14828.6 NODE_43499_length_461_cov_94.145540_g35815_i0forward_frame_2 - 0.023 13.5 0.3 0.025 13.4 0.3 1.1 1 0 0 1 1 1 0 Amnionless DUF5383 PF17355.2 NODE_43499_length_461_cov_94.145540_g35815_i0forward_frame_2 - 0.031 14.6 0.1 0.044 14.2 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5383) BatD PF13584.6 NODE_43499_length_461_cov_94.145540_g35815_i0forward_frame_2 - 0.034 13.0 0.1 0.04 12.8 0.1 1.1 1 0 0 1 1 1 0 Oxygen tolerance Orf78 PF06024.12 NODE_43499_length_461_cov_94.145540_g35815_i0forward_frame_2 - 0.11 12.8 0.1 0.18 12.1 0.1 1.3 1 0 0 1 1 1 0 Orf78 (ac78) ODV-E18 PF10717.9 NODE_43499_length_461_cov_94.145540_g35815_i0forward_frame_2 - 0.2 11.5 1.5 0.3 11.0 1.1 1.5 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 DUF3617 PF12276.8 NODE_43494_length_461_cov_111.809859_g35810_i0forward_frame_3 - 0.021 15.1 0.2 0.029 14.7 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3617) Glyco_hydro_30 PF02055.16 NODE_43492_length_461_cov_134.429577_g35808_i0reverse_frame_3 - 4.8e-24 85.0 0.1 5.5e-24 84.8 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 TIM-barrel domain TauD PF02668.16 NODE_43491_length_461_cov_143.931925_g35807_i0reverse_frame_2 - 1.4e-23 84.1 3.2 6.5e-17 62.2 0.1 2.0 2 0 0 2 2 2 2 Taurine catabolism dioxygenase TauD, TfdA family Lenti_VIF_2 PF07401.12 NODE_43491_length_461_cov_143.931925_g35807_i0forward_frame_2 - 0.13 11.6 0.1 0.23 10.8 0.1 1.4 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein PMT PF02366.18 NODE_43489_length_461_cov_175.039906_g35805_i0forward_frame_2 - 0.031 13.9 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase MORN PF02493.20 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 3.4e-16 58.1 32.9 1.4e-05 24.7 0.5 5.3 5 0 0 5 5 5 5 MORN repeat LIFR_N PF18207.1 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.0031 17.9 0.0 2.4 8.6 0.0 3.1 2 1 1 3 3 3 2 Leukemia inhibitory factor receptor N-terminal domain Sialidase PF02973.16 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.012 15.1 0.2 0.37 10.3 0.1 2.4 1 1 2 3 3 3 0 Sialidase, N-terminal domain Ntox27 PF15531.6 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.013 15.4 2.1 1.8 8.5 0.2 3.4 1 1 4 5 5 5 0 Bacterial toxin 27 Inhibitor_I36 PF03995.13 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.19 11.7 2.0 3.8 7.5 0.0 2.9 1 1 1 2 2 2 0 Peptidase inhibitor family I36 DUF2396 PF09654.10 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 0.33 11.1 1.3 46 4.1 0.1 3.2 1 1 3 4 4 4 0 Protein of unknown function (DUF2396) DUF1419 PF07215.11 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 1.5 8.9 3.1 50 4.1 0.1 3.7 1 1 4 5 5 5 0 Protein of unknown function (DUF1419) PHINT_rpt PF14882.6 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_3 - 9.3 6.6 7.1 78 3.6 0.0 3.9 5 0 0 5 5 5 0 Phage-integrase repeat unit Myb_DNA-bind_6 PF13921.6 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_2 - 0.061 13.6 5.5 1.1 9.6 0.3 2.5 1 1 1 2 2 2 0 Myb-like DNA-binding domain HTH_50 PF18024.1 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_2 - 0.1 12.2 0.0 0.25 11.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3489 PF11994.8 NODE_43487_length_461_cov_186.816901_g35803_i0forward_frame_2 - 0.28 11.3 0.9 5.1 7.2 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3489) PRC2_HTH_1 PF18118.1 NODE_43471_length_462_cov_1.906323_g35789_i0reverse_frame_2 - 0.26 12.1 0.2 0.67 10.8 0.0 1.6 2 0 0 2 2 2 0 Polycomb repressive complex 2 tri-helical domain DUF2039 PF10217.9 NODE_43470_length_462_cov_1.915691_g35788_i0reverse_frame_3 - 0.039 14.3 0.3 0.064 13.6 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) HK PF02110.15 NODE_43469_length_462_cov_2.213115_g35787_i0forward_frame_3 - 0.051 12.9 0.0 0.069 12.5 0.0 1.1 1 0 0 1 1 1 0 Hydroxyethylthiazole kinase family DUF569 PF04601.13 NODE_43457_length_462_cov_60.599532_g35775_i0reverse_frame_2 - 0.034 13.8 0.4 2.3 7.9 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF569) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks165.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks165.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks165.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks165.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Chloroa_b-bind PF00504.21 NODE_43456_length_462_cov_65.210773_g35774_i0reverse_frame_3 - 7.2e-20 72.1 0.0 9.9e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Chromadorea_ALT PF05535.12 NODE_43456_length_462_cov_65.210773_g35774_i0reverse_frame_2 - 0.012 15.7 1.5 0.057 13.6 0.2 2.1 2 0 0 2 2 2 0 Chromadorea ALT protein cNMP_binding PF00027.29 NODE_43453_length_462_cov_74.290398_g35771_i0forward_frame_3 - 1.2e-12 47.7 0.0 1.6e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain GLTT PF01744.20 NODE_43446_length_462_cov_95.786885_g35764_i0reverse_frame_3 - 9.5e-05 22.0 2.4 0.014 15.1 1.9 2.1 1 1 1 2 2 2 2 GLTT repeat (6 copies) GLTT PF01744.20 NODE_43446_length_462_cov_95.786885_g35764_i0forward_frame_3 - 0.014 15.2 0.4 0.15 11.9 0.1 2.7 1 1 1 2 2 2 0 GLTT repeat (6 copies) Pentapeptide PF00805.22 NODE_43446_length_462_cov_95.786885_g35764_i0forward_frame_2 - 0.00019 21.0 0.3 0.00034 20.2 0.3 1.4 1 0 0 1 1 1 1 Pentapeptide repeats (8 copies) Glyco_transf_10 PF00852.19 NODE_43442_length_462_cov_106.131148_g35760_i0forward_frame_3 - 1.9e-05 24.5 0.0 3e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 10 (fucosyltransferase) C-term DHHC PF01529.20 NODE_43439_length_462_cov_116.215457_g35757_i0reverse_frame_3 - 0.099 12.8 2.8 0.17 12.0 2.8 1.4 1 0 0 1 1 1 0 DHHC palmitoyltransferase OAD_gamma PF04277.13 NODE_43439_length_462_cov_116.215457_g35757_i0forward_frame_3 - 0.024 15.2 0.1 0.064 13.8 0.0 1.7 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain DUF2448 PF10476.9 NODE_43428_length_462_cov_176.400468_g35747_i0forward_frame_2 - 0.17 11.7 5.7 0.34 10.7 0.6 2.1 1 1 1 2 2 2 0 Protein of unknown function C-terminus (DUF2448) Fer2 PF00111.27 NODE_43413_length_462_cov_1745.316159_g35732_i0reverse_frame_3 - 0.021 14.8 0.5 0.032 14.2 0.5 1.3 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Ribosomal_S10 PF00338.22 NODE_43413_length_462_cov_1745.316159_g35732_i0reverse_frame_2 - 1.6e-26 92.3 0.0 2.3e-26 91.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e MFS_1_like PF12832.7 NODE_43412_length_462_cov_2782.981265_g35731_i0forward_frame_3 - 0.0059 15.5 2.0 0.0089 14.9 2.0 1.4 1 1 0 1 1 1 1 MFS_1 like family YqzM PF14141.6 NODE_43412_length_462_cov_2782.981265_g35731_i0forward_frame_3 - 0.044 13.8 0.8 0.2 11.7 0.8 2.1 1 0 0 1 1 1 0 YqzM-like protein DUF3671 PF12420.8 NODE_43412_length_462_cov_2782.981265_g35731_i0forward_frame_3 - 1.8 8.7 6.9 5.6 7.1 6.9 1.9 1 1 0 1 1 1 0 Protein of unknown function Phosphorylase PF00343.20 ORF99063 - 2e-55 188.4 0.1 2.2e-55 188.2 0.1 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase DCAF15_WD40 PF14939.6 ORF97572 - 0.022 14.4 1.1 0.029 14.0 1.1 1.2 1 0 0 1 1 1 0 DDB1-and CUL4-substrate receptor 15, WD repeat CSD PF00313.22 ORF9651 - 3.7e-06 26.7 0.7 5.8e-06 26.1 0.7 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain DGOK PF05035.12 ORF96287 - 8.1e-33 113.5 0.0 9.3e-33 113.3 0.0 1.0 1 0 0 1 1 1 1 2-keto-3-deoxy-galactonokinase SLD5_C PF16922.5 ORF94613 - 0.17 12.1 0.0 0.27 11.5 0.0 1.3 1 0 0 1 1 1 0 DNA replication complex GINS protein SLD5 C-terminus Dodecin PF07311.12 ORF94401 - 0.12 12.6 0.1 0.2 11.9 0.1 1.3 1 0 0 1 1 1 0 Dodecin TssN PF17555.2 ORF9360 - 0.17 11.3 1.3 0.19 11.1 1.3 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssN Flavi_NS1 PF00948.21 ORF93583 - 0.32 9.8 0.8 0.46 9.3 0.8 1.1 1 0 0 1 1 1 0 Flavivirus non-structural Protein NS1 FAM183 PF14886.6 ORF92876 - 0.0037 18.0 0.2 0.0068 17.1 0.2 1.6 1 1 0 1 1 1 1 FAM183A and FAM183B related LLC1 PF14945.6 ORF92876 - 0.024 15.2 1.7 0.13 12.8 1.7 2.0 1 1 0 1 1 1 0 Normal lung function maintenance, Low in Lung Cancer 1 protein Neuropep_like PF15161.6 ORF89859 - 0.1 12.3 0.1 0.18 11.5 0.1 1.5 1 0 0 1 1 1 0 Neuropeptide-like LVIVD PF08309.11 ORF89254 - 0.062 12.6 0.1 0.12 11.8 0.1 1.4 1 0 0 1 1 1 0 LVIVD repeat DUF1806 PF08830.10 ORF89254 - 0.11 12.5 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1806) TRAP-gamma PF07074.12 ORF89012 - 0.029 13.9 0.1 0.044 13.3 0.1 1.3 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) PHINT_rpt PF14882.6 ORF89012 - 0.076 13.3 1.6 0.13 12.5 0.6 1.9 2 0 0 2 2 2 0 Phage-integrase repeat unit Deltameth_res PF16020.5 ORF89012 - 3 7.8 5.7 2 8.4 0.1 2.8 2 1 0 2 2 2 0 Deltamethrin resistance Barwin PF00967.17 ORF87743 - 0.14 12.0 0.2 0.22 11.3 0.2 1.3 1 0 0 1 1 1 0 Barwin family 7tm_3 PF00003.22 ORF84872 - 0.0036 17.1 6.2 0.0045 16.8 6.2 1.1 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR DUF2070 PF09843.9 ORF8342 - 6.5 4.9 11.9 7 4.8 11.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FtsX PF02687.21 ORF83242 - 8.2e-13 48.7 18.3 2e-12 47.4 11.7 2.1 2 0 0 2 2 2 2 FtsX-like permease family DUF2632 PF10943.8 ORF83242 - 8.9 5.8 17.1 22 4.5 17.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2632) Herpes_BLRF2 PF05812.12 ORF82748 - 0.23 11.6 4.2 0.18 11.9 3.1 1.4 2 0 0 2 2 2 0 Herpesvirus BLRF2 protein zinc-ribbons_6 PF07191.12 ORF81806 - 0.016 15.2 3.2 3 7.9 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbons ubiquitin PF00240.23 ORF8023 - 5.5e-66 218.3 7.8 4.4e-33 112.8 0.9 2.0 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF8023 - 6.3e-31 106.0 9.2 2e-15 56.4 1.4 2.0 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF8023 - 9e-12 45.3 2.5 0.00016 22.1 0.2 3.3 2 2 0 2 2 2 2 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF8023 - 1.9e-08 34.1 0.8 0.0053 16.7 0.1 2.2 2 0 0 2 2 2 2 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF8023 - 5.5e-07 29.9 1.2 0.018 15.4 0.1 2.1 2 0 0 2 2 2 2 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF8023 - 6.6e-07 29.4 0.4 0.031 14.4 0.1 2.8 2 2 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF8023 - 5.8e-06 26.3 9.1 2.2 8.4 0.2 4.0 4 0 0 4 4 4 4 Ubiquitin-like domain DUF2407 PF10302.9 ORF8023 - 1.3e-05 25.7 0.2 0.062 13.9 0.0 2.2 1 1 0 2 2 2 2 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF8023 - 0.00036 20.4 0.1 0.74 9.6 0.0 2.1 1 1 1 2 2 2 2 Silencing defective 2 N-terminal ubiquitin domain DUF2870 PF11069.8 ORF8023 - 0.011 16.1 0.1 9.4 6.7 0.0 2.8 2 2 1 3 3 3 0 Protein of unknown function (DUF2870) DUF3861 PF12977.7 ORF8023 - 0.051 13.8 0.4 10 6.4 0.1 2.2 1 1 1 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3861) UDP-g_GGTase PF06427.11 ORF8023 - 0.12 12.5 0.8 1.3 9.2 0.1 2.4 3 0 0 3 3 3 0 UDP-glucose:Glycoprotein Glucosyltransferase TmoB PF06234.12 ORF8023 - 0.12 12.4 1.9 14 5.9 0.1 2.7 2 2 0 2 2 2 0 Toluene-4-monooxygenase system protein B (TmoB) FlgD_ig PF13860.6 ORF8023 - 0.16 11.8 1.2 20 5.2 0.1 2.4 2 0 0 2 2 2 0 FlgD Ig-like domain FERM_f0 PF16511.5 ORF8023 - 0.22 11.8 1.8 29 5.1 0.1 3.2 2 2 0 2 2 2 0 N-terminal or F0 domain of Talin-head FERM NUDIX PF00293.28 ORF80030 - 3.5e-19 69.2 0.0 4.3e-19 68.9 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain IL4_i_Ig PF18258.1 ORF78017 - 0.049 13.9 0.0 0.099 12.9 0.0 1.5 1 0 0 1 1 1 0 Interleukin-4 inducing immunoglobulin-binding domain Tubulin_2 PF13809.6 ORF78017 - 0.26 10.5 0.0 0.31 10.2 0.0 1.1 1 0 0 1 1 1 0 Tubulin like UQ_con PF00179.26 ORF77534 - 3.2e-49 166.2 0.2 3.7e-49 166.0 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF77534 - 0.0023 18.2 0.1 0.0031 17.8 0.1 1.3 1 0 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 ORF77534 - 0.0063 16.2 0.0 0.0069 16.1 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B UFC1 PF08694.11 ORF77534 - 0.031 13.9 0.3 0.047 13.3 0.3 1.5 1 1 0 1 1 1 0 Ubiquitin-fold modifier-conjugating enzyme 1 Phage_r1t_holin PF16945.5 ORF77534 - 0.2 11.8 0.1 0.31 11.3 0.1 1.2 1 0 0 1 1 1 0 Putative lactococcus lactis phage r1t holin Esterase_phd PF10503.9 ORF76643 - 0.2 11.1 5.7 0.23 10.9 5.7 1.2 1 0 0 1 1 1 0 Esterase PHB depolymerase DUF5531 PF17671.1 ORF7539 - 0.12 12.2 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5531) DUF3040 PF11239.8 ORF74871 - 0.31 11.3 1.2 20 5.5 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) p450 PF00067.22 ORF72884 - 6.1e-31 107.7 0.1 7.5e-31 107.4 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 SRP72 PF08492.12 ORF72884 - 0.063 13.7 0.4 0.097 13.1 0.4 1.3 1 0 0 1 1 1 0 SRP72 RNA-binding domain CENP-H PF05837.12 ORF71422 - 2.9 8.3 9.4 1.1 9.7 3.9 2.2 2 0 0 2 2 2 0 Centromere protein H (CENP-H) ImpA_N PF06812.12 ORF70837 - 0.078 13.1 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 ImpA, N-terminal, type VI secretion system DUF1658 PF07871.11 ORF70837 - 3.3 7.8 8.8 16 5.7 2.4 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) DUF4706 PF15797.5 ORF67066 - 0.097 13.2 0.0 0.15 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4706) Sdh5 PF03937.16 ORF66979 - 1.2e-10 41.2 0.1 1.9e-10 40.5 0.1 1.3 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase DUF2890 PF11081.8 ORF66385 - 0.031 14.4 0.8 0.24 11.5 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2890) Aa_trans PF01490.18 ORF65994 - 1e-09 37.7 3.4 1.2e-09 37.4 3.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein MFS_2 PF13347.6 ORF64704 - 9.6e-06 24.4 1.9 1.1e-05 24.1 1.9 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein TRP PF06011.12 ORF64704 - 0.0042 15.9 0.5 0.0051 15.6 0.5 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel MFS_1 PF07690.16 ORF64704 - 0.0046 15.9 2.1 0.0058 15.6 2.1 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily YfhO PF09586.10 ORF64704 - 0.009 14.3 0.1 0.01 14.1 0.1 1.0 1 0 0 1 1 1 1 Bacterial membrane protein YfhO Na_H_antiport_3 PF07399.11 ORF64704 - 0.013 14.4 1.0 0.015 14.2 1.0 1.1 1 0 0 1 1 1 0 Putative Na+/H+ antiporter DUF5423 PF17461.2 ORF64704 - 0.09 11.6 0.2 0.11 11.4 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) DUF1230 PF06799.11 ORF64704 - 0.31 11.1 2.9 0.23 11.6 1.2 1.6 1 1 1 2 2 2 0 Conserved in the green lineage and diatoms 27 LapA_dom PF06305.11 ORF64704 - 0.53 10.1 0.1 0.53 10.1 0.1 2.2 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain COX14 PF14880.6 ORF64704 - 1 9.3 0.0 1 9.3 0.0 2.4 4 0 0 4 4 4 0 Cytochrome oxidase c assembly DUF1129 PF06570.11 ORF64704 - 1.5 8.3 7.1 0.64 9.5 0.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) DUF2070 PF09843.9 ORF64704 - 2.9 6.1 5.1 3.7 5.7 5.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MTCP1 PF08991.10 ORF64597 - 0.11 12.7 5.9 0.2 11.9 5.9 1.4 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type ATP1G1_PLM_MAT8 PF02038.16 ORF63383 - 0.3 10.6 0.2 0.3 10.6 0.2 2.2 2 1 0 2 2 2 0 ATP1G1/PLM/MAT8 family Ferlin_C PF16165.5 ORF63323 - 8.6e-07 29.0 0.0 1e-06 28.8 0.0 1.1 1 0 0 1 1 1 1 Ferlin C-terminus pKID PF02173.17 ORF61956 - 0.83 9.2 4.1 1.5 8.3 4.1 1.4 1 0 0 1 1 1 0 pKID domain His_Phos_2 PF00328.22 ORF60712 - 0.033 13.5 0.5 0.034 13.5 0.5 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) Arginase PF00491.21 ORF58864 - 2.7e-33 115.7 0.0 3.1e-33 115.5 0.0 1.0 1 0 0 1 1 1 1 Arginase family DUF1287 PF06940.11 ORF58158 - 0.21 11.2 0.0 0.31 10.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1287) Ras PF00071.22 ORF57965 - 2.1e-32 112.0 0.0 2.3e-32 111.8 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF57965 - 1.4e-16 60.8 0.0 1.8e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF57965 - 2.8e-07 30.1 0.0 3.5e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SASRP1 PF15160.6 ORF57965 - 0.097 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 DdrB PF12747.7 ORF5739 - 0.062 13.1 2.0 0.16 11.8 0.4 1.9 2 0 0 2 2 2 0 DdrB-like protein PPP4R2 PF09184.11 ORF5739 - 0.21 11.2 26.7 0.25 10.9 26.7 1.1 1 0 0 1 1 1 0 PPP4R2 CDC27 PF09507.10 ORF5739 - 0.52 9.7 27.6 0.67 9.3 27.6 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Peptidase_C58 PF03543.14 ORF5739 - 1.3 8.7 11.0 0.057 13.1 4.3 1.8 1 1 1 2 2 2 0 Yersinia/Haemophilus virulence surface antigen TFIIA PF03153.13 ORF5739 - 1.6 8.6 28.5 1.9 8.4 28.5 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Nop14 PF04147.12 ORF5739 - 2.3 6.3 25.3 2.5 6.2 25.3 1.2 1 0 0 1 1 1 0 Nop14-like family Nucleo_P87 PF07267.11 ORF5739 - 8.7 5.1 13.4 11 4.7 13.4 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Stc1 PF12898.7 ORF56401 - 0.0057 17.2 0.8 0.47 11.0 0.0 2.4 1 1 0 2 2 2 2 Stc1 domain Cupin_1 PF00190.22 ORF55588 - 0.045 13.4 0.0 0.058 13.0 0.0 1.3 1 0 0 1 1 1 0 Cupin Poxvirus_B22R PF04395.12 ORF55171 - 0.067 12.7 0.4 0.088 12.3 0.4 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein Dynamitin PF04912.14 ORF54691 - 0.00034 20.1 0.9 0.0004 19.8 0.9 1.0 1 0 0 1 1 1 1 Dynamitin Fez1 PF06818.15 ORF54691 - 0.016 15.7 0.8 0.02 15.3 0.8 1.1 1 0 0 1 1 1 0 Fez1 Mito_fiss_reg PF05308.11 ORF54691 - 0.028 14.5 0.4 0.037 14.1 0.4 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator CDC73_N PF16050.5 ORF54691 - 0.25 10.6 1.8 0.3 10.4 1.8 1.1 1 0 0 1 1 1 0 Paf1 complex subunit CDC73 N-terminal DUF5320 PF17253.2 ORF54691 - 0.36 11.9 2.6 8.2 7.6 0.3 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Spc7 PF08317.11 ORF54691 - 0.42 9.5 2.1 0.54 9.1 2.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Uso1_p115_C PF04871.13 ORF54691 - 1.1 9.6 4.3 2.5 8.5 0.4 1.9 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region PPI_Ypi1 PF07491.11 ORF52472 - 0.026 14.3 0.1 0.056 13.3 0.1 1.5 1 0 0 1 1 1 0 Protein phosphatase inhibitor Gate PF07670.14 ORF52268 - 4.5e-09 36.6 2.2 7.3e-09 35.9 2.2 1.4 1 0 0 1 1 1 1 Nucleoside recognition Glyco_transf_5 PF08323.11 ORF52268 - 0.13 11.9 0.1 0.17 11.6 0.1 1.1 1 0 0 1 1 1 0 Starch synthase catalytic domain UQ_con PF00179.26 ORF51564 - 9.4e-55 184.1 0.0 1.1e-54 183.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF51564 - 0.0027 17.4 0.0 0.0033 17.1 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF51564 - 0.0067 16.7 0.0 0.0084 16.4 0.0 1.3 1 0 0 1 1 1 1 RWD domain UEV PF05743.13 ORF51564 - 0.063 13.1 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 UEV domain SUa-2TM PF18179.1 ORF51558 - 0.68 9.2 6.0 0.92 8.8 6.0 1.1 1 0 0 1 1 1 0 SMODS- and Ubiquitin system-associated 2TM effector domain Bowman-Birk_leg PF00228.20 ORF50570 - 4.7 7.7 14.7 5 7.6 1.9 3.1 2 0 0 2 2 2 0 Bowman-Birk serine protease inhibitor family ADIP PF11559.8 ORF44299 - 0.0097 16.0 4.7 0.016 15.3 0.4 2.1 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding Filament PF00038.21 ORF44299 - 0.014 15.0 6.0 0.045 13.3 6.0 1.9 1 1 0 1 1 1 0 Intermediate filament protein bZIP_1 PF00170.21 ORF44299 - 0.022 14.9 3.8 0.67 10.1 0.3 3.1 2 1 3 5 5 5 0 bZIP transcription factor HALZ PF02183.18 ORF44299 - 0.034 14.4 0.2 0.18 12.0 0.0 2.3 2 1 1 3 3 2 0 Homeobox associated leucine zipper SPATA24 PF15175.6 ORF44299 - 0.036 14.0 2.8 0.045 13.6 2.8 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 24 DivIC PF04977.15 ORF44299 - 0.06 13.1 6.7 0.81 9.5 0.1 3.0 1 1 2 3 3 3 0 Septum formation initiator IFP_35_N PF07334.13 ORF44299 - 0.085 12.9 0.1 1.2 9.2 0.0 2.3 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Syntaxin-6_N PF09177.11 ORF44299 - 0.085 13.4 0.4 0.085 13.4 0.4 2.2 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Rootletin PF15035.6 ORF44299 - 0.11 12.6 6.1 0.85 9.6 6.1 2.1 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Lyase_1 PF00206.20 ORF44299 - 0.12 11.7 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Lyase YabA PF06156.13 ORF44299 - 0.17 12.6 2.5 1.4 9.6 2.5 2.0 1 1 0 1 1 1 0 Initiation control protein YabA DUF812 PF05667.11 ORF44299 - 0.19 10.6 5.5 0.028 13.3 1.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Cep57_MT_bd PF06657.13 ORF44299 - 0.2 12.2 3.8 4.7 7.7 0.1 2.7 2 2 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 FlaC_arch PF05377.11 ORF44299 - 0.2 12.1 2.5 15 6.1 0.0 3.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) CENP-F_leu_zip PF10473.9 ORF44299 - 0.25 11.4 5.6 20 5.2 1.4 2.0 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fez1 PF06818.15 ORF44299 - 0.31 11.5 3.1 2.8 8.3 3.7 1.8 1 1 0 1 1 1 0 Fez1 APG6_N PF17675.1 ORF44299 - 0.38 11.3 8.4 7.9 7.0 8.4 2.1 1 1 0 1 1 1 0 Apg6 coiled-coil region Paralemmin PF03285.15 ORF44299 - 0.53 9.8 4.0 7.8 6.0 0.1 2.0 1 1 1 2 2 2 0 Paralemmin ATG16 PF08614.11 ORF44299 - 0.55 10.4 10.1 0.035 14.3 5.0 1.6 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Ead_Ea22 PF13935.6 ORF44299 - 0.55 10.9 4.6 1.2 9.8 4.6 1.7 1 1 0 1 1 1 0 Ead/Ea22-like protein Spc24 PF08286.11 ORF44299 - 0.58 10.4 3.9 16 5.8 3.9 2.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF1640 PF07798.11 ORF44299 - 0.65 10.0 6.0 0.98 9.4 6.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) CENP-H PF05837.12 ORF44299 - 0.67 10.4 6.0 0.78 10.2 1.7 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Macoilin PF09726.9 ORF44299 - 0.74 8.3 6.0 1.4 7.4 6.0 1.4 1 1 0 1 1 1 0 Macoilin family TMF_DNA_bd PF12329.8 ORF44299 - 0.9 9.6 6.1 1.8 8.6 0.2 2.6 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding SlyX PF04102.12 ORF44299 - 1 10.0 8.0 17 6.1 1.7 3.2 1 1 1 2 2 2 0 SlyX DUF4407 PF14362.6 ORF44299 - 1.1 8.6 5.0 1.8 7.9 5.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Cep57_CLD_2 PF14197.6 ORF44299 - 2.8 8.1 11.5 0.6 10.2 0.7 3.3 2 1 2 4 4 4 0 Centrosome localisation domain of PPC89 CENP-Q PF13094.6 ORF44299 - 6.4 7.0 9.4 2.3e+02 1.9 9.3 2.6 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit RDD PF06271.12 ORF42649 - 0.05 13.8 0.3 0.069 13.4 0.3 1.1 1 0 0 1 1 1 0 RDD family Nitr_red_alph_N PF14710.6 ORF41353 - 0.037 14.5 0.0 0.072 13.6 0.0 1.5 1 0 0 1 1 1 0 Respiratory nitrate reductase alpha N-terminal DUF3040 PF11239.8 ORF41227 - 0.31 11.3 1.2 20 5.5 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DUF3172 PF11371.8 ORF41067 - 0.056 13.2 0.8 0.081 12.6 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3172) EVC2_like PF12297.8 ORF41067 - 6.7 5.3 5.5 0.78 8.4 1.6 1.3 2 0 0 2 2 2 0 Ellis van Creveld protein 2 like protein Antimicrobial_6 PF08036.11 ORF372 - 4.1 7.6 9.4 13 5.9 0.5 2.4 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide Presenilin PF01080.17 ORF36598 - 6.9 5.3 5.1 7.8 5.1 5.1 1.1 1 0 0 1 1 1 0 Presenilin Bac_rhodopsin PF01036.18 ORF362 - 3.5e-19 69.3 4.3 4e-19 69.1 4.3 1.0 1 0 0 1 1 1 1 Bacteriorhodopsin-like protein Phage_holin_3_7 PF05449.11 ORF362 - 0.13 12.3 1.0 0.42 10.7 0.1 2.0 2 0 0 2 2 2 0 Putative 3TM holin, Phage_holin_3 Peptidase_A8 PF01252.18 ORF32782 - 0.095 12.9 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Signal peptidase (SPase) II DUF842 PF05811.13 ORF32572 - 4.5e-06 26.4 0.5 1.5e-05 24.7 0.5 1.9 1 1 0 1 1 1 1 Eukaryotic protein of unknown function (DUF842) Stc1 PF12898.7 ORF31543 - 0.0095 16.5 0.1 0.41 11.2 0.0 2.4 2 1 0 2 2 2 1 Stc1 domain FGFR3_TM PF18123.1 ORF31543 - 0.14 11.8 8.7 0.76 9.4 1.0 3.0 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain zf-nanos PF05741.13 ORF31543 - 2.9 8.2 6.6 5.7 7.2 0.4 3.2 3 0 0 3 3 3 0 Nanos RNA binding domain GET2 PF08690.10 ORF31252 - 3.1 7.4 5.4 3.7 7.1 5.4 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 Biliv-reduc_cat PF09166.10 ORF30935 - 0.025 14.9 0.9 0.28 11.5 0.3 2.1 2 0 0 2 2 2 0 Biliverdin reductase, catalytic DUF2561 PF10812.8 ORF30892 - 0.13 12.3 0.4 0.16 12.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2561) MINDY_DUB PF04424.13 ORF30469 - 0.024 14.6 0.0 0.048 13.7 0.0 1.5 2 0 0 2 2 2 0 MINDY deubiquitinase Fer2 PF00111.27 ORF2936 - 2.8e-10 40.0 0.9 4.4e-10 39.4 0.9 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 ORF2936 - 0.13 12.3 1.8 1.3 9.1 2.1 2.4 2 1 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain UQ_con PF00179.26 ORF28932 - 9.4e-55 184.1 0.0 1.1e-54 183.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF28932 - 0.0027 17.4 0.0 0.0033 17.1 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF28932 - 0.0067 16.7 0.0 0.0084 16.4 0.0 1.3 1 0 0 1 1 1 1 RWD domain UEV PF05743.13 ORF28932 - 0.063 13.1 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 UEV domain Sdh5 PF03937.16 ORF28207 - 1.2e-10 41.2 0.1 1.9e-10 40.5 0.1 1.3 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase DUF842 PF05811.13 ORF27719 - 0.02 14.6 6.4 0.023 14.4 6.4 1.3 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) DUF2162 PF09930.9 ORF27719 - 0.58 9.5 5.3 0.9 8.9 5.3 1.3 1 0 0 1 1 1 0 Predicted transporter (DUF2162) RINGv PF12906.7 ORF21338 - 4.1e-11 42.8 1.8 8.4e-11 41.8 1.8 1.6 1 1 0 1 1 1 1 RING-variant domain FHA PF00498.26 ORF21338 - 3.3e-09 37.0 0.8 6.5e-09 36.0 0.4 1.6 2 0 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 ORF21338 - 9.9e-07 29.0 0.0 1.9e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain zf-RRPl_C4 PF17026.5 ORF21338 - 0.0049 17.0 0.7 1.1 9.4 0.2 2.4 2 1 0 2 2 2 2 Putative ribonucleoprotein zinc-finger pf C4 type FANCL_C PF11793.8 ORF21338 - 0.042 14.0 2.1 0.093 12.9 2.0 1.7 1 1 0 1 1 1 0 FANCL C-terminal domain FHA_2 PF17913.1 ORF21338 - 0.053 13.8 0.1 0.099 12.9 0.1 1.4 1 0 0 1 1 1 0 FHA domain Tsc35 PF15079.6 ORF21217 - 1.4 8.4 4.4 2.6 7.6 4.4 1.4 1 0 0 1 1 1 0 Testis-specific protein 35 ubiquitin PF00240.23 ORF21209 - 5.9e-67 221.4 7.8 4.4e-33 112.8 0.9 2.0 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF21209 - 1.8e-31 107.8 9.3 2e-15 56.4 1.4 2.0 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF21209 - 3.7e-12 46.5 2.4 0.00015 22.2 0.2 3.3 2 2 0 2 2 2 2 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF21209 - 2.4e-08 33.8 0.7 0.0066 16.4 0.1 2.2 2 0 0 2 2 2 2 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF21209 - 1.5e-07 31.5 0.5 0.028 14.5 0.1 2.8 2 2 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF21209 - 1.9e-07 31.3 1.3 0.018 15.4 0.1 2.1 2 0 0 2 2 2 2 Ubiquitin-like domain DUF2407 PF10302.9 ORF21209 - 7.2e-07 29.7 0.2 0.053 14.1 0.0 2.1 1 1 1 2 2 2 2 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF21209 - 8.7e-06 25.7 9.2 2.2 8.4 0.2 4.0 4 0 0 4 4 4 4 Ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF21209 - 0.00049 20.0 0.0 0.87 9.4 0.0 2.1 1 1 1 2 2 2 2 Silencing defective 2 N-terminal ubiquitin domain DUF2870 PF11069.8 ORF21209 - 0.013 15.8 0.1 11 6.5 0.0 2.8 2 2 1 3 3 3 0 Protein of unknown function (DUF2870) DUF3861 PF12977.7 ORF21209 - 0.051 13.7 0.5 10 6.4 0.1 2.2 1 1 1 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3861) TmoB PF06234.12 ORF21209 - 0.069 13.3 1.5 14 5.9 0.1 2.7 2 2 0 2 2 2 0 Toluene-4-monooxygenase system protein B (TmoB) UDP-g_GGTase PF06427.11 ORF21209 - 0.12 12.5 0.8 1.3 9.2 0.1 2.4 3 0 0 3 3 3 0 UDP-glucose:Glycoprotein Glucosyltransferase DUF969 PF06149.12 ORF21209 - 0.15 11.4 0.0 5.6 6.3 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF969) FlgD_ig PF13860.6 ORF21209 - 0.22 11.4 1.6 21 5.0 0.1 2.4 2 0 0 2 2 2 0 FlgD Ig-like domain FERM_f0 PF16511.5 ORF21209 - 0.34 11.2 2.1 42 4.5 0.2 3.3 2 2 0 2 2 2 0 N-terminal or F0 domain of Talin-head FERM EF-hand_1 PF00036.32 ORF17221 - 3.7e-33 110.6 9.7 2.5e-08 32.9 0.4 4.3 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF17221 - 4.1e-30 104.0 7.1 4.8e-15 55.8 1.2 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF17221 - 3.8e-28 95.7 12.7 2.6e-06 26.6 0.4 4.5 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF17221 - 3.6e-27 91.9 9.3 7e-07 28.7 0.1 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF17221 - 9.9e-23 79.8 9.0 1.9e-11 43.6 0.5 3.9 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF17221 - 1.1e-10 41.7 0.0 4.3e-05 23.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF17221 - 2.2e-07 31.2 0.7 0.0074 16.6 0.2 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF17221 - 6e-07 29.4 3.6 0.021 14.8 0.2 2.9 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF17221 - 1.2e-05 25.1 2.0 0.0011 18.7 0.0 3.3 2 1 1 3 3 3 1 EF hand EF-hand_11 PF08976.11 ORF17221 - 1.9e-05 25.5 0.1 0.0062 17.4 0.0 2.1 1 1 1 2 2 2 1 EF-hand domain Dockerin_1 PF00404.18 ORF17221 - 0.00017 21.7 0.3 0.27 11.4 0.0 3.0 3 1 0 3 3 3 2 Dockerin type I domain TerB PF05099.13 ORF17221 - 0.002 18.1 0.2 0.045 13.7 0.0 2.4 2 1 1 3 3 3 1 Tellurite resistance protein TerB DUF5580 PF17743.1 ORF17221 - 0.0036 15.9 0.0 0.004 15.8 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5580) Caleosin PF05042.13 ORF17221 - 0.0094 15.9 0.2 11 6.0 0.0 3.4 1 1 3 4 4 4 0 Caleosin related protein EF-hand_14 PF17959.1 ORF17221 - 0.036 14.4 0.2 2.5 8.5 0.0 2.6 2 2 0 2 2 2 0 EF-hand domain p25-alpha PF05517.12 ORF17221 - 0.079 13.1 0.1 0.15 12.2 0.1 1.7 1 1 0 1 1 1 0 p25-alpha EFhand_Ca_insen PF08726.10 ORF17221 - 0.12 12.5 0.4 0.24 11.5 0.1 1.7 2 0 0 2 2 2 0 Ca2+ insensitive EF hand VCBS PF13517.6 ORF17221 - 0.16 12.6 1.3 15 6.2 0.0 2.6 3 0 0 3 3 3 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella FG-GAP PF01839.23 ORF17221 - 0.42 10.8 4.0 14 6.0 0.1 2.7 3 0 0 3 3 3 0 FG-GAP repeat Ubie_methyltran PF01209.18 ORF1663 - 0.016 14.5 0.0 0.022 14.1 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family DUF3040 PF11239.8 ORF16564 - 0.31 11.3 1.2 20 5.5 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) Orn_Arg_deC_N PF02784.16 ORF152765 - 0.075 12.4 0.4 0.084 12.2 0.4 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FAM183 PF14886.6 ORF152765 - 0.36 11.6 7.5 1.4 9.6 7.5 2.0 1 1 0 1 1 1 0 FAM183A and FAM183B related AAA_lid_3 PF17862.1 ORF151520 - 1.3e-08 34.5 0.0 2.6e-08 33.5 0.0 1.5 1 0 0 1 1 1 1 AAA+ lid domain AAA PF00004.29 ORF151520 - 9.6e-08 32.5 0.0 2.4e-07 31.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) UQ_con PF00179.26 ORF149876 - 1.2e-53 180.5 0.0 1.4e-53 180.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF149876 - 6.5e-05 22.6 0.0 8.7e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF149876 - 0.00062 20.0 0.1 0.00083 19.6 0.1 1.3 1 0 0 1 1 1 1 RWD domain Glyco_hydro_4C PF11975.8 ORF149629 - 5.3e-34 118.1 0.1 6e-34 117.9 0.1 1.0 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain Oxidored_q2 PF00420.24 ORF149063 - 0.044 13.4 0.1 0.049 13.3 0.1 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Vps39_1 PF10366.9 ORF149063 - 0.073 13.4 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 1 DUF3087 PF11286.8 ORF148266 - 0.019 14.5 0.9 0.048 13.1 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3087) JmjN PF02375.17 ORF147822 - 1.7e-12 47.1 0.8 2.9e-12 46.3 0.8 1.4 1 0 0 1 1 1 1 jmjN domain KIAA1430 PF13879.6 ORF1447 - 1.3 9.8 13.7 0.5 11.2 8.7 2.2 1 1 1 2 2 2 0 KIAA1430 homologue DUF1500 PF07389.12 ORF141734 - 0.047 13.8 0.5 0.084 13.0 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1500) bZIP_1 PF00170.21 ORF139673 - 7.8e-08 32.3 10.8 7.8e-08 32.3 10.8 2.4 2 0 0 2 2 2 1 bZIP transcription factor bZIP_2 PF07716.15 ORF139673 - 0.00022 21.2 14.7 0.00022 21.2 14.7 2.4 2 0 0 2 2 2 1 Basic region leucine zipper RPN2_C PF18004.1 ORF139673 - 0.27 11.1 23.7 0.36 10.7 23.7 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain TraH PF06122.11 ORF139673 - 0.71 9.1 5.6 0.86 8.8 5.6 1.2 1 0 0 1 1 1 0 Conjugative relaxosome accessory transposon protein VSG_B PF13206.6 ORF139673 - 1.1 8.5 15.2 1.2 8.3 15.2 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain RR_TM4-6 PF06459.12 ORF139673 - 1.7 8.4 18.5 2.1 8.1 18.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 SOBP PF15279.6 ORF139673 - 1.8 9.1 11.1 2.1 8.9 11.1 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein AAA_11 PF13086.6 ORF139673 - 2.4 7.9 16.6 3.3 7.4 16.6 1.3 1 0 0 1 1 1 0 AAA domain CDC45 PF02724.14 ORF139673 - 3 6.0 21.9 3.2 5.9 21.9 1.0 1 0 0 1 1 1 0 CDC45-like protein Vfa1 PF08432.10 ORF139673 - 3.5 7.9 24.9 5.1 7.4 24.9 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 XRN_M PF17846.1 ORF139673 - 4.3 6.2 15.7 5.2 5.9 15.7 1.0 1 0 0 1 1 1 0 Xrn1 helical domain Ndc1_Nup PF09531.10 ORF139673 - 4.6 5.8 9.4 5.3 5.6 9.4 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DDHD PF02862.17 ORF139673 - 5.9 7.0 10.1 7.8 6.6 10.1 1.3 1 0 0 1 1 1 0 DDHD domain Neur_chan_memb PF02932.16 ORF139673 - 7.2 6.6 10.3 9.9 6.1 10.3 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region GREB1 PF15782.5 ORF139673 - 7.5 3.5 15.4 9.1 3.3 15.4 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Dsh_C PF12316.8 ORF139673 - 8.4 6.7 7.7 10 6.5 7.7 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal NPAT_C PF15712.5 ORF139673 - 8.8 4.8 22.8 11 4.6 22.8 1.0 1 0 0 1 1 1 0 NPAT C terminus Ldh_2 PF02615.14 ORF138604 - 2.7e-18 66.2 0.0 3.2e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase CBP_BcsF PF11120.8 ORF138188 - 2.6e-30 104.3 0.4 3.8e-30 103.8 0.4 1.2 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsF Zn_ribbon_SprT PF17283.2 ORF13597 - 7.1 6.6 10.4 4.1 7.4 3.6 2.5 2 0 0 2 2 2 0 SprT-like zinc ribbon domain DSPc PF00782.20 ORF135066 - 3.4e-32 111.0 0.1 3.9e-32 110.8 0.1 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF135066 - 8.8e-05 22.2 0.1 0.00017 21.3 0.1 1.4 1 1 0 1 1 1 1 Protein-tyrosine phosphatase DUF3834 PF12916.7 ORF135066 - 0.00061 19.1 0.1 0.00076 18.8 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3834) PTPlike_phytase PF14566.6 ORF135066 - 0.011 15.8 0.0 0.018 15.2 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate Y_phosphatase3 PF13350.6 ORF135066 - 0.012 15.6 0.1 0.028 14.4 0.1 1.7 1 1 0 1 1 1 0 Tyrosine phosphatase family Glyoxalase_4 PF13669.6 ORF135066 - 0.079 13.2 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Init_tRNA_PT PF04179.12 ORF135066 - 0.18 12.1 0.0 0.41 11.0 0.0 1.5 1 1 0 1 1 1 0 Rit1 DUSP-like domain zf-RRN7 PF11781.8 ORF13139 - 0.022 14.4 0.4 0.038 13.7 0.4 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Sdh_cyt PF01127.22 ORF129806 - 0.12 12.4 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Lar_restr_allev PF14354.6 ORF12794 - 0.25 11.8 4.3 3.3 8.2 4.4 2.4 2 1 0 2 2 2 0 Restriction alleviation protein Lar Shisa PF13908.6 ORF126628 - 0.0047 17.2 0.4 0.0047 17.2 0.4 2.4 2 1 0 2 2 2 1 Wnt and FGF inhibitory regulator DUF1129 PF06570.11 ORF126628 - 0.29 10.6 1.9 1.4 8.3 1.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) Mem_trans PF03547.18 ORF126628 - 0.93 7.8 3.2 1.1 7.6 3.2 1.2 1 0 0 1 1 1 0 Membrane transport protein WBP-1 PF11669.8 ORF126628 - 0.95 10.1 16.4 0.3 11.7 4.0 2.6 1 1 0 2 2 2 0 WW domain-binding protein 1 DUF4199 PF13858.6 ORF126628 - 4.3 7.7 9.4 3.4 8.0 7.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) ODV-E18 PF10717.9 ORF126628 - 4.6 7.2 0.0 4.6 7.2 0.0 3.0 2 1 1 3 3 3 0 Occlusion-derived virus envelope protein ODV-E18 ABC2_membrane_3 PF12698.7 ORF126628 - 10 5.1 14.2 2.4 7.2 10.6 1.7 2 0 0 2 2 2 0 ABC-2 family transporter protein HemY_N PF07219.13 ORF125992 - 0.14 12.4 0.0 0.28 11.4 0.0 1.5 2 0 0 2 2 2 0 HemY protein N-terminus Prok-RING_4 PF14447.6 ORF124962 - 4.6e-09 36.0 7.8 4.6e-09 36.0 7.8 2.0 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF124962 - 9.3e-09 35.0 10.9 9.3e-09 35.0 10.9 2.2 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF124962 - 3.1e-06 27.0 5.2 3.1e-06 27.0 5.2 2.3 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF124962 - 8.3e-06 26.0 9.1 8.3e-06 26.0 9.1 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF124962 - 6.1e-05 22.8 9.1 6.1e-05 22.8 9.1 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF124962 - 6.9e-05 22.7 11.2 6.9e-05 22.7 11.2 2.8 2 1 1 3 3 3 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF124962 - 0.00024 21.0 2.2 0.00024 21.0 2.2 2.3 1 1 1 2 2 2 1 RING-type zinc-finger Rtf2 PF04641.12 ORF124962 - 1.6 8.1 7.6 2.4 7.5 7.6 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger DUF3338 PF11819.8 ORF123750 - 0.0022 18.0 2.2 0.076 13.0 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF3338) DUF4175 PF13779.6 ORF123750 - 0.0056 14.7 0.5 0.0065 14.5 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4175) DUF2721 PF11026.8 ORF123750 - 0.014 15.3 0.0 0.014 15.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) Claudin_2 PF13903.6 ORF123750 - 0.032 14.0 0.3 0.047 13.5 0.1 1.4 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF599 PF04654.12 ORF123750 - 0.26 10.7 0.0 0.34 10.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF599 Orf78 PF06024.12 ORF123750 - 1.4 9.2 3.1 3.9 7.8 3.1 1.9 1 1 0 1 1 1 0 Orf78 (ac78) Peptidase_C1 PF00112.23 ORF123220 - 7.3e-21 75.3 3.4 8.8e-21 75.0 3.4 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF123220 - 2.9e-05 23.1 0.2 3.3e-05 22.9 0.2 1.2 1 0 0 1 1 1 1 Peptidase C1-like family HD PF01966.22 ORF122556 - 6.3e-10 39.3 0.1 1e-09 38.6 0.1 1.3 1 0 0 1 1 1 1 HD domain HDOD PF08668.12 ORF122556 - 0.0062 16.0 0.0 0.0078 15.7 0.0 1.2 1 0 0 1 1 1 1 HDOD domain HD_2 PF12917.7 ORF122556 - 0.076 12.8 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 HD containing hydrolase-like enzyme Laminin_B PF00052.18 ORF118933 - 0.00022 21.1 0.0 0.00033 20.6 0.0 1.3 1 0 0 1 1 1 1 Laminin B (Domain IV) Arch_fla_DE PF04659.13 ORF118933 - 0.093 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Archaeal flagella protein DAAD PF18752.1 ORF1175 - 0.18 11.7 4.0 0.2 11.5 4.0 1.1 1 0 0 1 1 1 0 Dictyosteliid AID/APOBEC-like Deaminase UQ_con PF00179.26 ORF115497 - 4.7e-52 175.4 0.0 5.4e-52 175.2 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF115497 - 0.0099 16.2 0.0 0.011 16.0 0.0 1.3 1 0 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 ORF115497 - 0.027 14.2 0.0 0.033 13.9 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B UEV PF05743.13 ORF115497 - 0.05 13.5 0.0 0.08 12.8 0.0 1.3 1 0 0 1 1 1 0 UEV domain ubiquitin PF00240.23 ORF114317 - 2.5e-56 187.3 5.6 4.4e-33 112.8 0.9 2.0 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF114317 - 5.5e-23 80.6 9.1 2e-15 56.4 1.4 2.0 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF114317 - 3.1e-09 37.1 3.0 0.00016 22.1 0.2 3.4 2 2 0 2 2 2 2 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF114317 - 5.5e-06 26.4 6.7 2.2 8.4 0.2 4.0 3 1 1 4 4 4 4 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF114317 - 1.8e-05 24.6 0.4 0.0069 16.3 0.1 2.2 2 0 0 2 2 2 2 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF114317 - 2.7e-05 24.2 0.3 0.031 14.4 0.1 2.9 2 2 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF114317 - 6.9e-05 23.1 0.9 0.018 15.4 0.1 2.2 2 0 0 2 2 2 2 Ubiquitin-like domain Blt1 PF12754.7 ORF114317 - 0.0015 18.9 1.1 0.053 13.8 0.2 2.1 1 1 0 2 2 2 1 Blt1 N-terminal domain DUF2407 PF10302.9 ORF114317 - 0.0017 18.9 0.4 0.071 13.7 0.0 2.2 1 1 0 2 2 2 1 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF114317 - 0.0081 16.0 0.0 0.93 9.3 0.0 2.1 2 0 0 2 2 2 1 Silencing defective 2 N-terminal ubiquitin domain Gln_deamidase_2 PF18626.1 ORF113787 - 0.11 12.8 0.2 0.18 12.1 0.1 1.4 1 1 0 1 1 1 0 Glutaminase H2TH PF06831.14 ORF11245 - 2.7e-11 43.3 0.0 3.7e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain zf-FPG_IleRS PF06827.14 ORF11245 - 7.6e-09 35.3 3.7 1.3e-08 34.6 3.7 1.4 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS DUF4351 PF14261.6 ORF11245 - 0.067 13.3 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4351) Zn-ribbon_8 PF09723.10 ORF11245 - 0.12 12.6 0.7 0.18 12.0 0.7 1.4 1 0 0 1 1 1 0 Zinc ribbon domain FbpA PF05833.11 ORF11245 - 0.17 10.6 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) HXXEE PF13787.6 ORF110367 - 0.012 16.4 1.5 0.016 16.0 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif Hol_Tox PF16935.5 ORF109480 - 0.14 12.2 0.0 8.2 6.6 0.0 2.2 2 0 0 2 2 2 0 Putative Holin-like Toxin (Hol-Tox) DUF765 PF05570.11 ORF109016 - 0.045 13.9 0.1 0.1 12.8 0.1 1.6 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF765) DUF1295 PF06966.12 ORF108654 - 7.8e-41 140.1 0.0 8.7e-41 140.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF108654 - 3.9e-06 26.9 0.1 4.9e-06 26.6 0.1 1.3 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF108654 - 1.3e-05 25.5 0.1 3.6e-05 24.1 0.1 1.7 1 1 1 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF108654 - 6.3e-05 23.3 0.2 0.00011 22.5 0.2 1.5 1 1 0 1 1 1 1 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF108654 - 0.00042 19.2 0.2 0.00077 18.3 0.2 1.5 1 1 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family SabA_adhesion PF18304.1 ORF108654 - 0.28 10.4 0.0 0.49 9.6 0.0 1.3 2 0 0 2 2 2 0 SabA N-terminal extracellular adhesion domain Prenyltrans PF00432.21 ORF106334 - 0.013 15.2 2.4 0.013 15.2 2.4 2.1 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat Flavodoxin_2 PF02525.17 ORF106334 - 0.092 12.4 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Flavodoxin-like fold DUF1068 PF06364.12 ORF106147 - 0.74 9.7 5.7 1 9.2 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) CxC6 PF18721.1 ORF10586 - 0.023 15.0 1.0 0.023 15.0 1.0 1.6 2 0 0 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases PLAC PF08686.11 ORF10586 - 0.18 12.6 1.1 0.18 12.6 1.1 2.0 2 1 0 2 2 2 0 PLAC (protease and lacunin) domain Connexin PF00029.19 NODE_43965_length_454_cov_1.761337_g36256_i0forward_frame_1 - 0.057 13.2 0.6 0.075 12.8 0.1 1.4 2 0 0 2 2 2 0 Connexin DUF979 PF06166.12 NODE_43961_length_454_cov_2.322196_g36252_i0reverse_frame_1 - 0.072 12.2 0.5 0.08 12.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF979) DotA PF11388.8 NODE_43961_length_454_cov_2.322196_g36252_i0reverse_frame_1 - 0.46 10.7 2.3 0.35 11.1 0.6 1.6 2 0 0 2 2 2 0 Phagosome trafficking protein DotA MFS_1 PF07690.16 NODE_43960_length_454_cov_2.343675_g36251_i0forward_frame_1 - 0.02 13.8 5.5 0.024 13.6 5.5 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily Gemini_AL1 PF00799.20 NODE_43954_length_454_cov_2.928401_g36245_i0forward_frame_1 - 0.13 12.6 2.9 0.5 10.7 0.4 2.1 2 0 0 2 2 2 0 Geminivirus Rep catalytic domain Mx_ML PF17536.2 NODE_43948_length_454_cov_3.758950_g36239_i0reverse_frame_1 - 0.031 14.0 0.1 0.056 13.2 0.1 1.3 1 0 0 1 1 1 0 Matrix and Matrix long proteins N-terminal PikAIV_N PF18605.1 NODE_43944_length_454_cov_39.250597_g36235_i0forward_frame_1 - 6.7 6.4 6.1 11 5.7 6.1 1.4 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain zinc_ribbon_10 PF10058.9 NODE_43938_length_454_cov_63.145585_g36229_i0forward_frame_1 - 0.0058 16.3 2.8 0.0094 15.7 2.8 1.3 1 0 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein TMEM173 PF15009.6 NODE_43938_length_454_cov_63.145585_g36229_i0forward_frame_1 - 0.082 12.1 3.7 0.12 11.5 3.7 1.2 1 0 0 1 1 1 0 Transmembrane protein 173 MmgE_PrpD PF03972.14 NODE_43930_length_454_cov_102.000000_g36221_i0forward_frame_1 - 0.00021 20.0 0.1 0.00034 19.3 0.1 1.2 1 0 0 1 1 1 1 MmgE/PrpD family zf-C3HC4_3 PF13920.6 NODE_43918_length_454_cov_161.627685_g36209_i0reverse_frame_1 - 0.00019 21.2 7.7 0.00048 19.9 7.7 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) CEBP_ZZ PF16366.5 NODE_43918_length_454_cov_161.627685_g36209_i0reverse_frame_1 - 0.05 13.8 3.3 0.05 13.8 3.3 2.2 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain DUF3772 PF12607.8 NODE_43909_length_454_cov_496.930788_g36201_i0forward_frame_1 - 0.078 12.7 0.2 0.53 10.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3772) GWT1 PF06423.12 NODE_43903_length_454_cov_2984.291169_g36195_i0reverse_frame_1 - 0.13 12.4 0.3 0.14 12.2 0.3 1.1 1 0 0 1 1 1 0 GWT1 CttA_N PF18244.1 NODE_43896_length_455_cov_2.121429_g36189_i0forward_frame_1 - 0.042 14.3 0.6 0.072 13.5 0.6 1.3 1 0 0 1 1 1 0 Cellulose-binding protein CttA N-terminal domain MTBP_N PF14918.6 NODE_43896_length_455_cov_2.121429_g36189_i0forward_frame_1 - 0.073 12.5 0.0 0.098 12.1 0.0 1.2 1 0 0 1 1 1 0 MDM2-binding Actin PF00022.19 NODE_43890_length_455_cov_2.733333_g36183_i0reverse_frame_1 - 4.8e-06 25.4 0.1 5e-06 25.4 0.1 1.1 1 0 0 1 1 1 1 Actin Scaffolding_pro PF11418.8 NODE_43890_length_455_cov_2.733333_g36183_i0reverse_frame_1 - 0.75 10.4 3.9 0.92 10.1 3.0 1.6 1 1 1 2 2 2 0 Phi29 scaffolding protein zf-CCHC PF00098.23 NODE_43888_length_455_cov_3.064286_g36181_i0reverse_frame_1 - 0.0045 17.0 0.2 0.0067 16.5 0.2 1.3 1 0 0 1 1 1 1 Zinc knuckle Herpes_LMP1 PF05297.11 NODE_43888_length_455_cov_3.064286_g36181_i0reverse_frame_1 - 8.1 5.5 8.7 11 5.1 8.7 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) BCMA-Tall_bind PF09257.10 NODE_43887_length_455_cov_3.354762_g36180_i0reverse_frame_1 - 0.13 12.4 2.0 0.26 11.4 2.0 1.5 1 0 0 1 1 1 0 BCMA, TALL-1 binding Transp_cyt_pur PF02133.15 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 3e-37 128.5 11.4 3.3e-37 128.3 11.4 1.0 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin PKD_channel PF08016.12 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.0083 14.9 0.9 0.011 14.4 0.9 1.2 1 0 0 1 1 1 1 Polycystin cation channel SLATT_5 PF18160.1 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.071 12.4 0.4 0.2 11.0 0.0 1.8 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 PDR_CDR PF06422.12 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.27 11.1 3.5 0.93 9.4 0.1 2.3 1 1 1 2 2 2 0 CDR ABC transporter WTF PF03303.13 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.5 10.1 3.1 0.89 9.2 2.4 1.6 1 1 1 2 2 2 0 WTF protein DUF2768 PF10966.8 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 0.65 10.5 0.1 0.65 10.5 0.1 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF2768) DUF1206 PF06724.11 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 1 9.5 11.4 0.2 11.8 5.9 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1206) DUF2157 PF09925.9 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 1.2 8.9 8.3 0.17 11.6 3.5 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) DUF456 PF04306.13 NODE_43882_length_455_cov_4.007143_g36175_i0forward_frame_1 - 2.6 8.3 14.5 4.2 7.7 14.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF456) DUF3450 PF11932.8 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 0.039 13.2 7.5 0.055 12.8 7.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) LUC7 PF03194.15 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 0.041 13.5 9.7 0.047 13.4 9.2 1.4 1 1 0 1 1 1 0 LUC7 N_terminus MEDS PF14417.6 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 0.06 13.2 0.5 0.095 12.5 0.5 1.4 1 1 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain RRF_GI PF12614.8 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 0.06 13.5 5.2 0.08 13.1 4.5 1.6 1 1 1 2 2 2 0 Ribosome recycling factor Fzo_mitofusin PF04799.13 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 0.085 12.4 8.1 0.1 12.1 7.5 1.4 1 1 0 1 1 1 0 fzo-like conserved region MICSWaP PF17018.5 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 0.09 12.3 2.3 0.2 11.2 0.8 1.8 1 1 1 2 2 2 0 Spore wall protein DUF5446 PF17522.2 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 0.22 11.7 3.4 1.2 9.3 0.6 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5446) Syntaxin-6_N PF09177.11 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 0.24 12.0 8.5 0.15 12.7 3.1 2.2 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Baculo_PEP_C PF04513.12 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 0.26 11.3 3.7 0.3 11.1 1.7 1.8 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 NODE_43864_length_455_cov_114.497619_g36157_i0reverse_frame_1 - 1 9.4 7.7 1.8 8.6 1.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) amfpi-1 PF12190.8 NODE_43846_length_455_cov_957.414286_g36140_i0forward_frame_1 - 0.05 14.2 0.6 0.05 14.2 0.6 1.9 2 0 0 2 2 2 0 Fungal protease inhibitor # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks166.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks166.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks166.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks166.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YjcZ PF13990.6 NODE_43843_length_456_cov_1.700713_g36138_i0forward_frame_1 - 0.04 13.3 0.6 0.054 12.9 0.4 1.4 1 1 0 1 1 1 0 YjcZ-like protein 2-ph_phosp PF04029.14 NODE_43843_length_456_cov_1.700713_g36138_i0forward_frame_1 - 0.047 12.9 0.0 0.08 12.1 0.0 1.4 1 0 0 1 1 1 0 2-phosphosulpholactate phosphatase Lamprin PF06403.11 NODE_43837_length_456_cov_2.615202_g36132_i0forward_frame_1 - 2.3 8.2 5.8 2.9 7.9 5.8 1.1 1 0 0 1 1 1 0 Lamprin Response_reg PF00072.24 NODE_43833_length_456_cov_3.159145_g36128_i0forward_frame_1 - 7.5e-05 22.9 0.0 0.00011 22.3 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain PAP2 PF01569.21 NODE_43819_length_456_cov_73.973872_g36114_i0reverse_frame_1 - 4.9e-08 32.8 1.2 7.5e-08 32.2 1.2 1.3 1 0 0 1 1 1 1 PAP2 superfamily DUF212 PF02681.14 NODE_43819_length_456_cov_73.973872_g36114_i0reverse_frame_1 - 0.19 11.9 3.1 6.2 7.0 0.2 2.2 1 1 1 2 2 2 0 Divergent PAP2 family YrvL PF14184.6 NODE_43819_length_456_cov_73.973872_g36114_i0reverse_frame_1 - 0.2 11.7 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Regulatory protein YrvL Glyco_hydro_3_C PF01915.22 NODE_43818_length_456_cov_74.546318_g36113_i0reverse_frame_1 - 2.2e-24 86.5 0.0 2.6e-24 86.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Antimicrobial23 PF16048.5 NODE_43817_length_456_cov_74.878860_g36112_i0reverse_frame_1 - 0.063 13.0 0.8 0.13 12.0 0.8 1.6 1 0 0 1 1 1 0 Frog antimicrobial peptide Peptidase_C9 PF01707.16 NODE_43817_length_456_cov_74.878860_g36112_i0reverse_frame_1 - 0.11 12.1 0.1 0.15 11.7 0.1 1.2 1 0 0 1 1 1 0 Peptidase family C9 Defensin_beta PF00711.19 NODE_43815_length_456_cov_79.270784_g36110_i0forward_frame_1 - 0.52 10.4 4.9 6.8 6.8 0.7 3.0 2 0 0 2 2 2 0 Beta defensin DUF1247 PF06851.11 NODE_43815_length_456_cov_79.270784_g36110_i0forward_frame_1 - 1.8 8.5 6.9 2.3 8.2 6.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) RhgB_N PF09284.10 NODE_43805_length_456_cov_97.199525_g36100_i0reverse_frame_1 - 0.086 12.4 0.1 0.12 11.9 0.1 1.2 1 0 0 1 1 1 0 Rhamnogalacturonan lyase B, N-terminal RCSD PF05177.12 NODE_43795_length_456_cov_164.985748_g36091_i0forward_frame_1 - 0.011 16.7 0.3 0.011 16.7 0.3 1.6 2 0 0 2 2 2 0 RCSD region Caprin-1_dimer PF18293.1 NODE_43787_length_456_cov_249.686461_g36083_i0reverse_frame_1 - 0.00047 20.6 0.1 0.00065 20.2 0.1 1.1 1 0 0 1 1 1 1 Caprin-1 dimerization domain DUF4674 PF15719.5 NODE_43764_length_457_cov_2.701422_g36062_i0forward_frame_3 - 1.7 8.6 8.4 0.79 9.7 5.4 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4674) LAP1C PF05609.12 NODE_43764_length_457_cov_2.701422_g36062_i0forward_frame_2 - 0.12 11.4 7.6 0.13 11.3 7.6 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) CCDC71L PF15374.6 NODE_43764_length_457_cov_2.701422_g36062_i0forward_frame_2 - 6 6.0 12.3 6.5 5.9 12.3 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 71L NAD_binding_3 PF03447.16 NODE_43762_length_457_cov_3.161137_g36060_i0reverse_frame_3 - 1.6e-28 99.7 0.0 1.8e-28 99.5 0.0 1.0 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain MSA-2c PF12238.8 NODE_43762_length_457_cov_3.161137_g36060_i0reverse_frame_3 - 0.1 12.6 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Pyr_redox_2 PF07992.14 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 2.3e-05 23.8 0.0 2.9e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 0.00023 21.7 0.0 0.0011 19.5 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 0.011 15.0 0.0 0.014 14.7 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 0.089 13.2 0.0 0.14 12.7 0.0 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding SVM_signal PF12113.8 NODE_43761_length_457_cov_3.196682_g36059_i0reverse_frame_2 - 0.2 11.6 0.1 0.33 10.9 0.1 1.3 1 0 0 1 1 1 0 SVM protein signal sequence Syd PF07348.12 NODE_43761_length_457_cov_3.196682_g36059_i0forward_frame_2 - 0.12 12.0 0.0 0.24 11.0 0.0 1.4 2 0 0 2 2 2 0 Syd protein (SUKH-2) SRP1_TIP1 PF00660.17 NODE_43760_length_457_cov_3.206161_g36058_i0forward_frame_2 - 0.065 13.3 0.1 0.16 12.0 0.1 1.7 1 0 0 1 1 1 0 Seripauperin and TIP1 family DUF4088 PF13317.6 NODE_43757_length_457_cov_10.781991_g36055_i0reverse_frame_3 - 0.048 13.2 0.9 0.062 12.9 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4088) YjbH PF06082.11 NODE_43757_length_457_cov_10.781991_g36055_i0reverse_frame_3 - 0.77 8.5 2.5 0.91 8.3 2.5 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH gpUL132 PF11359.8 NODE_43757_length_457_cov_10.781991_g36055_i0reverse_frame_3 - 3.1 7.3 4.3 12 5.3 0.1 2.1 1 1 0 2 2 2 0 Glycoprotein UL132 DUF3275 PF11679.8 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 0.48 10.4 5.8 0.65 9.9 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) SAPS PF04499.15 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 1.3 7.7 13.8 1.5 7.5 13.8 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein GAGA_bind PF06217.12 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 1.6 8.9 16.8 1.8 8.8 16.8 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family FUSC PF04632.12 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 8.6 4.8 6.4 11 4.5 6.4 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF4410 PF14366.6 NODE_43751_length_457_cov_61.893365_g36049_i0reverse_frame_3 - 9.7 6.1 10.8 0.35 10.8 3.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4410) Ribosomal_S27 PF01599.19 NODE_43740_length_457_cov_88.085308_g36038_i0forward_frame_3 - 9.7e-24 83.3 2.3 9.7e-24 83.3 2.3 2.0 2 0 0 2 2 2 1 Ribosomal protein S27a ubiquitin PF00240.23 NODE_43740_length_457_cov_88.085308_g36038_i0forward_frame_3 - 8.5e-05 22.2 0.0 0.00027 20.6 0.0 1.8 2 0 0 2 2 2 1 Ubiquitin family Cas_Cas7 PF05107.12 NODE_43727_length_457_cov_185.831754_g36025_i0forward_frame_3 - 0.065 12.8 0.0 0.065 12.8 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein Cas7 Cas_TM1802 PF09484.10 NODE_43718_length_457_cov_2502.132701_g34665_i5forward_frame_3 - 0.25 10.1 0.1 0.3 9.8 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) Gp49 PF05973.14 NODE_43714_length_458_cov_1.912530_g36015_i0reverse_frame_2 - 0.068 13.3 0.2 0.11 12.6 0.2 1.4 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) Dynein_AAA_lid PF17852.1 NODE_43711_length_458_cov_2.359338_g36012_i0reverse_frame_3 - 0.11 12.6 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain DUF1002 PF06207.11 NODE_43710_length_458_cov_2.382979_g36011_i0reverse_frame_3 - 0.04 13.5 0.1 0.048 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) Phi-29_GP16_7 PF06720.11 NODE_43710_length_458_cov_2.382979_g36011_i0reverse_frame_3 - 0.051 13.4 0.1 0.06 13.2 0.1 1.2 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 STATa_Ig PF18214.1 NODE_43709_length_458_cov_2.475177_g36010_i0reverse_frame_2 - 0.016 15.2 0.5 0.028 14.4 0.1 1.6 1 1 0 1 1 1 0 STATa Immunoglobulin-like domain DUF3346 PF11826.8 NODE_43703_length_458_cov_4.945626_g36004_i0reverse_frame_2 - 0.076 12.8 0.1 0.092 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) CesT PF05932.13 NODE_43702_length_458_cov_5.758865_g36003_i0reverse_frame_2 - 0.079 13.1 0.0 0.13 12.4 0.0 1.4 1 1 0 1 1 1 0 Tir chaperone protein (CesT) family DnaJ PF00226.31 NODE_43695_length_458_cov_80.170213_g35996_i0reverse_frame_2 - 0.0049 17.0 0.1 0.011 15.9 0.0 1.6 2 0 0 2 2 2 1 DnaJ domain IMUP PF15761.5 NODE_43695_length_458_cov_80.170213_g35996_i0reverse_frame_2 - 0.039 14.6 0.4 0.061 14.0 0.4 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein ACP_syn_III_C PF08541.10 NODE_43695_length_458_cov_80.170213_g35996_i0forward_frame_3 - 0.21 11.8 0.0 1.5 9.0 0.0 2.0 1 1 1 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DUF2545 PF10810.8 NODE_43695_length_458_cov_80.170213_g35996_i0forward_frame_2 - 0.019 15.1 0.3 0.037 14.1 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2545) Ndc1_Nup PF09531.10 NODE_43695_length_458_cov_80.170213_g35996_i0forward_frame_2 - 0.021 13.6 0.1 0.032 12.9 0.1 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Glyco_hydro_92N PF17678.1 NODE_43694_length_458_cov_83.000000_g35995_i0reverse_frame_3 - 0.043 13.7 0.0 0.046 13.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 92 N-terminal domain PHINT_rpt PF14882.6 NODE_43691_length_458_cov_87.784870_g35992_i0reverse_frame_2 - 0.013 15.7 2.3 0.02 15.1 0.7 1.9 1 1 1 2 2 2 0 Phage-integrase repeat unit Herpes_UL56 PF04534.12 NODE_43690_length_458_cov_89.874704_g35991_i0reverse_frame_2 - 0.13 11.7 0.2 0.21 11.1 0.2 1.2 1 0 0 1 1 1 0 Herpesvirus UL56 protein MVP_shoulder PF11978.8 NODE_43688_length_458_cov_92.777778_g35989_i0reverse_frame_3 - 0.066 13.2 0.1 0.099 12.7 0.1 1.2 1 0 0 1 1 1 0 Shoulder domain Sigma_reg_N PF13800.6 NODE_43685_length_458_cov_96.654846_g35986_i0forward_frame_2 - 0.026 14.8 6.2 0.073 13.4 6.2 1.8 1 0 0 1 1 1 0 Sigma factor regulator N-terminal LRRC37AB_C PF14914.6 NODE_43685_length_458_cov_96.654846_g35986_i0forward_frame_2 - 0.2 11.5 5.5 0.11 12.4 3.6 1.5 1 1 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain Peptidase_M23 PF01551.22 NODE_43681_length_458_cov_100.952719_g35982_i0reverse_frame_2 - 1.5e-15 57.2 0.0 2.1e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M23 RnfC_N PF13375.6 NODE_43681_length_458_cov_100.952719_g35982_i0reverse_frame_2 - 0.018 15.0 0.2 0.36 10.8 0.1 2.2 1 1 0 2 2 2 0 RnfC Barrel sandwich hybrid domain RLI PF04068.15 NODE_43679_length_458_cov_104.730496_g35980_i0forward_frame_3 - 0.049 13.5 1.2 0.11 12.3 1.2 1.5 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI BILBO1_N PF18281.1 NODE_43678_length_458_cov_115.905437_g35979_i0reverse_frame_3 - 0.049 14.1 0.6 0.097 13.1 0.6 1.5 1 0 0 1 1 1 0 BILBO1 N-terminal domain NLE PF08154.12 NODE_43678_length_458_cov_115.905437_g35979_i0forward_frame_3 - 0.062 13.8 0.1 0.22 12.0 0.0 1.9 2 0 0 2 2 2 0 NLE (NUC135) domain HydF_dimer PF18128.1 NODE_43678_length_458_cov_115.905437_g35979_i0forward_frame_3 - 0.081 13.0 0.5 1.5 8.9 0.0 2.1 2 0 0 2 2 2 0 Hydrogen maturase F dimerization domain Avl9 PF09794.9 NODE_43671_length_458_cov_190.546099_g35973_i0reverse_frame_2 - 0.067 11.9 3.5 0.077 11.7 3.5 1.2 1 0 0 1 1 1 0 Transport protein Avl9 DUF3920 PF13058.6 NODE_43671_length_458_cov_190.546099_g35973_i0forward_frame_2 - 0.055 13.7 0.8 0.055 13.7 0.8 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3920) DUF4405 PF14358.6 NODE_43663_length_458_cov_518.737589_g35965_i0reverse_frame_3 - 0.0094 16.5 2.8 3.1 8.4 0.9 2.7 1 1 1 2 2 2 2 Domain of unknown function (DUF4405) DUF2157 PF09925.9 NODE_43663_length_458_cov_518.737589_g35965_i0reverse_frame_3 - 0.22 11.3 7.3 26 4.6 7.3 2.9 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF4064 PF13273.6 NODE_43663_length_458_cov_518.737589_g35965_i0reverse_frame_3 - 0.86 9.9 9.9 1.4 9.2 7.6 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) ENT PF03735.14 NODE_43659_length_458_cov_7025.219858_g414_i2reverse_frame_3 - 0.039 14.0 1.7 0.046 13.8 0.3 1.9 2 1 0 2 2 2 0 ENT domain DUF2514 PF10721.9 NODE_43659_length_458_cov_7025.219858_g414_i2reverse_frame_3 - 1 9.4 12.0 1.2 9.1 12.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2514) DUF3426 PF11906.8 NODE_43659_length_458_cov_7025.219858_g414_i2forward_frame_3 - 0.12 12.6 1.2 0.16 12.1 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3426) DUF2830 PF11125.8 NODE_43659_length_458_cov_7025.219858_g414_i2forward_frame_3 - 5.3 7.1 8.7 1.9 8.6 1.9 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2830) FAM217 PF15344.6 NODE_43651_length_459_cov_2.558962_g35955_i0forward_frame_2 - 1.5 8.7 5.6 2.1 8.3 5.6 1.1 1 0 0 1 1 1 0 FAM217 family Cnd1_N PF12922.7 NODE_43644_length_459_cov_3.009434_g35948_i0forward_frame_3 - 0.029 14.2 0.6 0.046 13.6 0.6 1.3 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term ERF PF04404.12 NODE_43642_length_459_cov_3.316038_g35946_i0forward_frame_2 - 0.2 11.5 0.4 0.67 9.8 0.1 1.9 2 0 0 2 2 2 0 ERF superfamily Vmethyltransf PF01660.17 NODE_43630_length_459_cov_76.863208_g35934_i0reverse_frame_3 - 0.12 11.2 0.0 0.16 10.8 0.0 1.3 1 1 0 1 1 1 0 Viral methyltransferase NR_Repeat PF14046.6 NODE_43630_length_459_cov_76.863208_g35934_i0forward_frame_3 - 1.1 9.5 7.1 0.4 10.8 2.1 2.6 3 0 0 3 3 3 0 Nuclear receptor repeat HAD_2 PF13419.6 NODE_43630_length_459_cov_76.863208_g35934_i0forward_frame_2 - 0.026 14.6 0.0 0.032 14.3 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 NODE_43630_length_459_cov_76.863208_g35934_i0forward_frame_2 - 0.085 13.1 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase CRT-like PF08627.10 NODE_43619_length_459_cov_110.589623_g35925_i0reverse_frame_2 - 0.00019 20.5 0.2 0.00023 20.2 0.2 1.1 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like Lig_chan PF00060.26 NODE_43619_length_459_cov_110.589623_g35925_i0reverse_frame_2 - 0.23 11.3 1.4 0.35 10.7 0.0 2.0 2 1 1 3 3 3 0 Ligand-gated ion channel NT5C PF06941.12 NODE_43618_length_459_cov_113.540094_g35924_i0reverse_frame_3 - 0.08 12.8 0.1 0.35 10.7 0.1 1.8 1 1 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Adenine_deam_C PF13382.6 NODE_43616_length_459_cov_120.615566_g35922_i0reverse_frame_2 - 0.13 11.6 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 Adenine deaminase C-terminal domain DUF1262 PF06880.11 NODE_43609_length_459_cov_173.733491_g35915_i0forward_frame_3 - 0.2 12.1 1.0 2.1 8.8 1.0 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1262) Ribosomal_L31e PF01198.19 NODE_43607_length_459_cov_191.224057_g35913_i0forward_frame_3 - 6.7e-38 128.8 2.5 9.6e-38 128.3 2.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L31e FERM_F2 PF18377.1 NODE_43607_length_459_cov_191.224057_g35913_i0forward_frame_3 - 0.11 12.4 1.5 0.37 10.7 0.5 1.9 1 1 1 2 2 2 0 FERM F2 acyl-CoA binding protein-like domain Stomagen PF16851.5 NODE_43607_length_459_cov_191.224057_g35913_i0forward_frame_2 - 0.045 13.8 0.3 0.097 12.7 0.3 1.5 1 0 0 1 1 1 0 Stomagen N-glycanase_C PF09113.10 NODE_43599_length_459_cov_380.384434_g35907_i0forward_frame_3 - 0.013 15.3 0.4 0.02 14.7 0.4 1.3 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal FMN_red PF03358.15 ORF99515 - 8.4e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 NADPH-dependent FMN reductase CCDC-167 PF15188.6 ORF95825 - 0.022 15.1 2.0 0.022 15.1 2.0 1.7 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 CRISPR_Cas2 PF09827.9 ORF95825 - 0.22 11.8 4.2 0.13 12.5 0.7 2.2 3 0 0 3 3 3 0 CRISPR associated protein Cas2 MbeB_N PF04837.12 ORF95825 - 0.48 10.8 5.9 7.6 6.9 0.1 2.4 2 0 0 2 2 2 0 MbeB-like, N-term conserved region PolyA_pol_arg_C PF12626.7 ORF94327 - 7e-42 142.2 2.7 8.9e-42 141.9 2.7 1.1 1 0 0 1 1 1 1 Polymerase A arginine-rich C-terminus F-box-like_2 PF13013.6 ORF93103 - 0.037 14.0 0.2 0.074 13.0 0.2 1.5 1 0 0 1 1 1 0 F-box-like domain CARD PF00619.21 ORF93103 - 0.14 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Caspase recruitment domain DUF1140 PF06600.11 ORF9240 - 0.46 11.0 7.5 0.082 13.4 3.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1140) Minor_capsid_1 PF10665.9 ORF9033 - 0.0066 16.6 0.2 0.01 16.0 0.2 1.4 1 0 0 1 1 1 1 Minor capsid protein Tctex-1 PF03645.13 ORF89902 - 0.12 12.6 0.1 0.18 12.0 0.1 1.4 1 0 0 1 1 1 0 Tctex-1 family CD36 PF01130.21 ORF87678 - 4.9e-05 22.0 0.0 6.3e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 CD36 family DUF4801 PF16059.5 ORF86788 - 0.015 15.3 1.7 0.31 11.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4801) DUF5345 PF17280.2 ORF86422 - 0.48 10.4 4.7 7.8 6.6 1.5 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5345) DUF1658 PF07871.11 ORF8261 - 0.049 13.6 0.0 4.9 7.3 0.0 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1658) HTH_18 PF12833.7 ORF82466 - 8.1e-22 77.3 0.9 1.4e-21 76.6 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF82466 - 1.1e-18 66.8 0.1 3.2e-12 46.2 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_31 PF13560.6 ORF82466 - 0.0036 17.6 0.0 0.028 14.8 0.0 2.1 1 1 1 2 2 2 2 Helix-turn-helix domain Baculo_LEF-11 PF06385.12 ORF82466 - 0.1 13.1 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 Baculovirus LEF-11 protein SHIPPO-rpt PF07004.12 ORF81623 - 0.12 13.3 15.0 2.3 9.3 0.6 3.7 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat zf-RING_10 PF16685.5 ORF81493 - 0.083 13.0 0.9 0.13 12.4 0.9 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 cNMP_binding PF00027.29 ORF81103 - 5.9e-06 26.3 0.0 8.5e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain UQ_con PF00179.26 ORF80057 - 3.9e-54 182.1 0.0 4.4e-54 181.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF80057 - 0.00031 20.4 0.0 0.00039 20.1 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF80057 - 0.0049 17.1 0.1 0.0049 17.1 0.1 1.3 1 0 0 1 1 1 1 RWD domain UEV PF05743.13 ORF80057 - 0.035 14.0 0.0 0.058 13.3 0.0 1.4 1 0 0 1 1 1 0 UEV domain Sulfatase PF00884.23 ORF77650 - 1.4 8.2 4.6 0.16 11.3 0.7 1.4 2 0 0 2 2 2 0 Sulfatase Ras PF00071.22 ORF75801 - 8.4e-14 51.5 0.0 1.1e-13 51.1 0.0 1.1 1 0 0 1 1 1 1 Ras family Arf PF00025.21 ORF75801 - 0.066 12.7 0.0 0.091 12.2 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family ACP_syn_III_C PF08541.10 ORF7470 - 0.11 12.7 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GSH-S_ATP PF02955.16 ORF73867 - 2.6e-61 206.0 0.0 3e-61 205.9 0.0 1.0 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain RimK PF08443.11 ORF73867 - 4.7e-09 36.1 0.0 5.3e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GP63 PF17471.2 ORF72492 - 0.038 14.1 0.5 0.088 13.0 0.3 1.7 1 1 1 2 2 2 0 Gene product 63 zf-C2H2 PF00096.26 ORF69580 - 1.7e-18 65.9 16.9 1.6e-06 28.3 2.4 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF69580 - 3.8e-12 45.9 13.9 0.00038 21.1 1.4 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF69580 - 4e-09 36.5 14.1 4.8e-05 23.6 0.3 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF69580 - 5.7e-07 29.2 3.1 5.7e-07 29.2 3.1 3.4 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF69580 - 4.8e-06 26.8 9.5 0.00013 22.2 0.5 2.2 1 1 1 2 2 2 2 C2H2-type zinc ribbon zf-met PF12874.7 ORF69580 - 0.00042 20.6 11.9 0.0065 16.8 0.8 3.4 3 1 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF69580 - 0.0011 19.2 9.6 0.015 15.7 0.7 2.9 1 1 2 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 ORF69580 - 0.0017 18.0 2.8 0.0075 16.0 0.2 2.4 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 ORF69580 - 0.008 16.2 14.9 0.12 12.4 2.7 3.0 3 1 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF69580 - 0.0087 16.3 1.9 0.0087 16.3 1.9 2.7 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding Rubredoxin PF00301.20 ORF69580 - 0.03 14.3 0.7 0.13 12.3 0.7 2.1 1 1 0 1 1 1 0 Rubredoxin CxC3 PF18804.1 ORF69580 - 0.047 13.5 0.5 0.12 12.2 0.5 1.7 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases Actin_micro PF17003.5 ORF69580 - 0.05 12.8 7.1 0.81 8.8 1.4 2.2 1 1 1 2 2 2 0 Putative actin-like family Mut7-C PF01927.16 ORF69580 - 0.063 13.4 4.3 0.05 13.7 2.5 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.10 ORF69580 - 0.094 12.8 6.4 0.49 10.6 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zinc_ribbon_15 PF17032.5 ORF69580 - 0.31 11.8 7.6 0.13 13.0 4.6 1.9 1 1 1 2 2 2 0 zinc-ribbon family DUF629 PF04780.12 ORF69580 - 0.53 8.7 5.7 0.34 9.4 0.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF629) PyrI_C PF02748.15 ORF69580 - 0.78 9.7 8.0 4.1 7.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-LYAR PF08790.11 ORF69580 - 0.83 9.6 6.4 0.6 10.1 0.3 3.1 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger zf-BED PF02892.15 ORF69580 - 2.7 8.1 13.7 7 6.8 1.8 2.8 1 1 1 2 2 2 0 BED zinc finger zf-AN1 PF01428.16 ORF69580 - 3.3 8.0 9.5 9.5 6.5 0.5 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger DD_K PF12121.8 ORF69311 - 1.1 9.4 0.0 1.1 9.4 0.0 2.8 3 0 0 3 3 3 0 Dermaseptin DUF3069 PF11269.8 ORF69026 - 0.24 11.6 1.5 0.58 10.4 1.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3069) DUF3430 PF11912.8 ORF68412 - 4.5e-05 23.6 3.1 6.1e-05 23.2 3.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3430) SIT PF15330.6 ORF68412 - 0.024 15.1 0.5 0.024 15.1 0.5 1.6 1 1 1 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT Herpes_LMP1 PF05297.11 ORF68412 - 0.13 11.4 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF4834 PF16118.5 ORF68412 - 2 9.5 5.4 36 5.4 5.4 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DZR PF12773.7 ORF64102 - 0.02 14.9 1.2 0.02 14.9 1.2 1.8 2 0 0 2 2 2 0 Double zinc ribbon zinc_ribbon_9 PF14369.6 ORF64102 - 0.095 13.0 2.0 3.1 8.1 0.3 2.5 2 0 0 2 2 2 0 zinc-ribbon Terminase_GpA PF05876.12 ORF64102 - 0.14 10.7 0.3 0.15 10.5 0.3 1.1 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) PriA_CRR PF18319.1 ORF64102 - 0.57 10.2 11.9 0.57 10.2 0.8 2.7 3 0 0 3 3 3 0 PriA DNA helicase Cys-rich region (CRR) domain PKcGMP_CC PF16808.5 ORF63453 - 0.37 10.7 7.4 0.26 11.2 4.7 2.1 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Csm1_B PF18211.1 ORF62385 - 0.019 14.8 1.2 0.2 11.5 0.1 2.2 1 1 1 2 2 2 0 Csm1 subunit domain B DUF4830 PF16112.5 ORF62385 - 0.094 13.2 0.8 0.16 12.5 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Polo_box_3 PF18544.1 ORF62385 - 1.3 9.7 6.4 0.25 12.0 0.9 2.2 1 1 2 3 3 3 0 Polo box domain DHC PF09626.10 ORF62385 - 1.5 9.7 4.4 1 10.2 1.3 1.9 1 1 1 2 2 2 0 Dihaem cytochrome c LysR_substrate PF03466.20 ORF59981 - 4.4e-28 98.1 0.0 4.8e-28 98.0 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Haemadin PF09065.10 ORF59030 - 0.076 12.8 1.8 0.1 12.4 0.1 2.1 2 0 0 2 2 2 0 Haemadin EMP24_GP25L PF01105.24 ORF56799 - 4.8e-17 62.5 0.0 5.2e-17 62.4 0.0 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Neuropep_like PF15161.6 ORF56609 - 0.097 12.4 2.6 11 5.8 0.1 3.3 2 1 0 2 2 2 0 Neuropeptide-like TMEM154 PF15102.6 ORF56341 - 0.014 15.3 0.1 0.037 13.9 0.0 1.6 1 1 1 2 2 2 0 TMEM154 protein family FGF PF00167.18 ORF56198 - 0.15 12.2 0.0 0.96 9.6 0.0 1.9 1 1 0 1 1 1 0 Fibroblast growth factor DAP PF15228.6 ORF54904 - 0.62 11.3 4.1 0.36 12.0 0.8 2.0 1 1 1 2 2 2 0 Death-associated protein HEXIM PF15313.6 ORF54904 - 4.3 7.5 10.5 1.2 9.3 3.5 2.1 2 0 0 2 2 2 0 Hexamethylene bis-acetamide-inducible protein Nop PF01798.18 ORF52354 - 0.013 14.9 3.3 0.017 14.6 3.3 1.1 1 0 0 1 1 1 0 snoRNA binding domain, fibrillarin ANAPC1 PF12859.7 ORF52354 - 0.39 11.3 2.7 0.51 10.9 2.7 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 Dickkopf_N PF04706.12 ORF5149 - 0.016 15.6 1.1 0.016 15.6 1.1 4.0 4 1 0 4 4 4 0 Dickkopf N-terminal cysteine-rich region MIT_LIKE_ACTX PF17556.2 ORF5149 - 4.3 8.0 12.7 0.7 10.5 0.5 2.9 2 2 1 3 3 3 0 MIT-like atracotoxin family DUF4164 PF13747.6 ORF47967 - 0.0044 17.3 2.6 0.018 15.3 0.5 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4164) Phage_lysozyme2 PF18013.1 ORF47967 - 0.034 14.1 1.3 0.057 13.4 1.3 1.5 1 1 0 1 1 1 0 Phage tail lysozyme Fungal_TACC PF12709.7 ORF47967 - 0.07 13.6 9.1 0.11 12.9 1.2 2.4 2 1 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF4201 PF13870.6 ORF47967 - 0.23 11.2 13.3 0.15 11.8 1.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) SlyX PF04102.12 ORF47967 - 0.55 10.9 3.8 3.5 8.3 0.2 2.4 1 1 1 2 2 2 0 SlyX Seryl_tRNA_N PF02403.22 ORF47967 - 0.56 10.5 9.3 1.4 9.2 7.0 2.4 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Holin_BhlA PF10960.8 ORF47967 - 0.7 9.9 5.7 0.52 10.3 0.5 2.5 2 1 1 3 3 3 0 BhlA holin family DUF848 PF05852.11 ORF47967 - 1.3 9.1 9.1 0.24 11.5 1.9 2.1 1 1 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) KIAA1430 PF13879.6 ORF47967 - 1.9 9.3 17.3 0.16 12.7 6.6 2.0 1 1 1 2 2 2 0 KIAA1430 homologue DUF4558 PF15104.6 ORF47967 - 1.9 8.6 7.9 4.6 7.4 0.5 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4558) DUF3307 PF11750.8 ORF46395 - 0.037 14.1 3.2 0.13 12.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3307) PIP49_N PF14875.6 ORF46349 - 0.053 13.4 1.7 0.061 13.2 0.7 1.6 1 1 1 2 2 2 0 N-term cysteine-rich ER, FAM69 Csm1_B PF18211.1 ORF44844 - 0.019 14.8 1.2 0.2 11.5 0.1 2.2 1 1 1 2 2 2 0 Csm1 subunit domain B DUF4830 PF16112.5 ORF44844 - 0.094 13.2 0.8 0.16 12.5 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Polo_box_3 PF18544.1 ORF44844 - 1.3 9.7 6.4 0.25 12.0 0.9 2.2 1 1 2 3 3 3 0 Polo box domain DHC PF09626.10 ORF44844 - 1.5 9.7 4.4 1 10.2 1.3 1.9 1 1 1 2 2 2 0 Dihaem cytochrome c Glycoamylase PF10091.9 ORF36880 - 0.052 13.1 0.2 0.067 12.7 0.2 1.1 1 0 0 1 1 1 0 Putative glucoamylase zf-C2H2 PF00096.26 ORF36267 - 1.7e-18 65.9 16.9 1.6e-06 28.3 2.4 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF36267 - 3.8e-12 45.9 13.9 0.00038 21.1 1.4 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF36267 - 4e-09 36.5 14.1 4.8e-05 23.6 0.3 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF36267 - 5.7e-07 29.2 3.1 5.7e-07 29.2 3.1 3.4 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF36267 - 4.8e-06 26.8 9.5 0.00013 22.2 0.5 2.2 1 1 1 2 2 2 2 C2H2-type zinc ribbon zf-met PF12874.7 ORF36267 - 0.00042 20.6 11.9 0.0065 16.8 0.8 3.4 3 1 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF36267 - 0.0011 19.2 9.6 0.015 15.7 0.7 2.9 1 1 2 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 ORF36267 - 0.0017 18.0 2.8 0.0075 16.0 0.2 2.4 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 ORF36267 - 0.008 16.2 14.9 0.12 12.4 2.7 3.0 3 1 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF36267 - 0.0087 16.3 1.9 0.0087 16.3 1.9 2.7 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding Rubredoxin PF00301.20 ORF36267 - 0.03 14.3 0.7 0.13 12.3 0.7 2.1 1 1 0 1 1 1 0 Rubredoxin CxC3 PF18804.1 ORF36267 - 0.047 13.5 0.5 0.12 12.2 0.5 1.7 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases Actin_micro PF17003.5 ORF36267 - 0.05 12.8 7.1 0.81 8.8 1.4 2.2 1 1 1 2 2 2 0 Putative actin-like family Mut7-C PF01927.16 ORF36267 - 0.063 13.4 4.3 0.05 13.7 2.5 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.10 ORF36267 - 0.094 12.8 6.4 0.49 10.6 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zinc_ribbon_15 PF17032.5 ORF36267 - 0.31 11.8 7.6 0.13 13.0 4.6 1.9 1 1 1 2 2 2 0 zinc-ribbon family DUF629 PF04780.12 ORF36267 - 0.53 8.7 5.7 0.34 9.4 0.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF629) PyrI_C PF02748.15 ORF36267 - 0.78 9.7 8.0 4.1 7.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-LYAR PF08790.11 ORF36267 - 0.83 9.6 6.4 0.6 10.1 0.3 3.1 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger zf-BED PF02892.15 ORF36267 - 2.7 8.1 13.7 7 6.8 1.8 2.8 1 1 1 2 2 2 0 BED zinc finger zf-AN1 PF01428.16 ORF36267 - 3.3 8.0 9.5 9.5 6.5 0.5 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger Ank_2 PF12796.7 ORF35387 - 1.6e-26 92.7 2.0 2e-13 50.7 0.7 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF35387 - 1.7e-20 73.1 3.3 4.1e-07 30.4 0.1 3.6 1 1 4 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF35387 - 1e-16 60.5 5.7 0.00068 20.0 0.1 5.0 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF35387 - 1.8e-13 49.3 1.7 0.059 13.9 0.0 5.0 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 ORF35387 - 4.3e-11 42.8 6.6 0.0063 16.8 0.4 4.8 1 1 4 5 5 5 3 Ankyrin repeats (many copies) VWA_3_C PF18571.1 ORF35387 - 0.0057 16.5 3.5 0.71 9.8 0.2 4.0 4 0 0 4 4 4 1 von Willebrand factor type A C-terminal domain NSs PF11073.8 ORF35387 - 0.0062 16.0 0.7 0.23 10.9 0.4 2.4 1 1 2 3 3 3 1 Rift valley fever virus non structural protein (NSs) like PTS_IIA PF02255.16 ORF35387 - 0.015 15.3 4.4 0.55 10.3 1.2 2.2 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit DUF3645 PF12359.8 ORF35387 - 0.17 11.3 0.0 2 7.9 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3645) Nse4-Nse3_bdg PF15412.6 ORF35387 - 0.79 9.9 4.8 4.9 7.3 0.0 3.3 4 0 0 4 4 4 0 Binding domain of Nse4/EID3 to Nse3-MAGE IPP-2 PF04979.14 ORF34867 - 2.2e-16 60.8 13.4 2.6e-16 60.6 13.4 1.1 1 0 0 1 1 1 1 Protein phosphatase inhibitor 2 (IPP-2) Ldt_C PF17969.1 ORF34867 - 0.029 15.1 0.7 0.12 13.2 0.4 2.1 1 1 1 2 2 2 0 L,D-transpeptidase C-terminal domain DUF3435 PF11917.8 ORF34867 - 0.47 9.3 5.3 0.58 9.0 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) peroxidase PF00141.23 ORF33477 - 4.8e-13 49.3 0.0 8.3e-13 48.6 0.0 1.4 1 1 0 1 1 1 1 Peroxidase bZIP_1 PF00170.21 ORF33398 - 4.2e-09 36.4 7.3 4.2e-09 36.4 7.3 1.6 1 1 1 2 2 2 2 bZIP transcription factor bZIP_2 PF07716.15 ORF33398 - 2.2e-06 27.7 7.6 6.6e-06 26.1 3.5 2.1 1 1 1 2 2 2 2 Basic region leucine zipper DUF1640 PF07798.11 ORF33398 - 0.003 17.6 3.7 0.0041 17.2 3.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) UPF0242 PF06785.11 ORF33398 - 0.0053 16.9 2.0 0.0066 16.6 2.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus KASH_CCD PF14662.6 ORF33398 - 0.014 15.2 9.8 0.048 13.5 4.4 2.0 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH WDCP PF15390.6 ORF33398 - 0.029 12.8 4.7 0.035 12.5 4.7 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Sec2p PF06428.11 ORF33398 - 0.039 13.9 3.3 0.039 13.9 3.3 1.4 1 1 0 1 1 1 0 GDP/GTP exchange factor Sec2p DivIC PF04977.15 ORF33398 - 0.1 12.4 0.9 0.19 11.5 0.6 1.6 1 1 0 1 1 1 0 Septum formation initiator GIT_CC PF16559.5 ORF33398 - 0.11 12.4 5.3 0.55 10.1 2.3 2.3 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor CLZ PF16526.5 ORF33398 - 0.85 10.0 8.0 3.3 8.1 2.5 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF1719 PF08224.11 ORF30652 - 0.094 11.8 2.0 0.12 11.5 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) Anti-TRAP PF15777.5 ORF30462 - 0.33 11.0 4.5 0.14 12.1 1.3 2.2 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF1472 PF07339.12 ORF30369 - 0.027 15.0 0.1 0.036 14.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1472) NUC173 PF08161.12 ORF30369 - 0.035 13.8 0.0 0.046 13.4 0.0 1.2 1 0 0 1 1 1 0 NUC173 domain K-box PF01486.17 ORF30369 - 0.063 13.5 1.3 0.097 12.9 1.3 1.3 1 0 0 1 1 1 0 K-box region Tctex-1 PF03645.13 ORF28195 - 0.12 12.6 0.1 0.18 12.0 0.1 1.4 1 0 0 1 1 1 0 Tctex-1 family CDO_I PF05995.12 ORF26868 - 0.15 11.4 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Cysteine dioxygenase type I zf-C2H2 PF00096.26 ORF26280 - 2.4e-18 65.5 16.0 1.6e-06 28.3 2.4 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF26280 - 2.3e-11 43.5 13.0 0.00038 21.1 1.4 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF26280 - 6.7e-10 38.9 13.0 4.8e-05 23.6 0.3 2.9 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF26280 - 5.7e-07 29.2 3.1 5.7e-07 29.2 3.1 3.5 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF26280 - 8.7e-05 22.8 7.6 0.00013 22.2 0.5 2.2 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF26280 - 0.0016 18.2 2.0 0.0075 16.0 0.2 2.4 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-met PF12874.7 ORF26280 - 0.0035 17.7 10.5 0.12 12.8 0.4 3.5 3 1 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF26280 - 0.022 15.1 0.8 0.022 15.1 0.8 2.8 1 1 2 3 3 3 0 C2H2 type zinc-finger (2 copies) Mut7-C PF01927.16 ORF26280 - 0.047 13.8 3.9 0.073 13.2 3.9 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain zinc_ribbon_15 PF17032.5 ORF26280 - 0.052 14.3 5.1 0.052 14.3 5.1 1.9 1 1 1 2 2 2 0 zinc-ribbon family Zn-ribbon_8 PF09723.10 ORF26280 - 0.11 12.7 6.3 0.63 10.2 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF26280 - 0.34 11.0 15.7 0.1 12.7 2.7 3.0 3 1 0 3 3 3 0 C2H2-type zinc finger HNH_5 PF14279.6 ORF26280 - 0.47 10.3 5.9 0.38 10.6 2.7 2.3 2 1 0 2 2 2 0 HNH endonuclease PyrI_C PF02748.15 ORF26280 - 0.51 10.3 7.4 4.1 7.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2H2_jaz PF12171.8 ORF26280 - 0.59 10.5 8.7 0.28 11.5 1.4 2.8 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-Di19 PF05605.12 ORF26280 - 1.1 9.6 5.5 0.85 10.0 3.2 2.0 2 1 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-AN1 PF01428.16 ORF26280 - 1.8 8.8 8.9 9.5 6.5 0.5 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger zf-C2HE PF16278.5 ORF26280 - 2.4 8.7 9.6 4.5 7.8 2.8 2.7 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger C1_4 PF07975.12 ORF26280 - 6.1 7.2 9.4 49 4.3 7.1 2.7 1 1 2 3 3 3 0 TFIIH C1-like domain Acetyltransf_1 PF00583.25 ORF24182 - 6.1e-09 36.1 0.0 7.6e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF24182 - 1.2e-06 28.8 0.0 1.9e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF24182 - 0.0012 18.8 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF24182 - 0.007 16.4 0.0 0.03 14.4 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF1233 PF06806.12 ORF24182 - 0.1 12.2 0.0 0.16 11.6 0.0 1.4 1 0 0 1 1 1 0 Putative excisionase (DUF1233) Acetyltransf_6 PF13480.7 ORF24182 - 0.16 12.1 0.0 0.26 11.4 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain zf-RING_2 PF13639.6 ORF20066 - 8.4e-08 32.4 3.9 8.4e-08 32.4 3.9 1.6 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 ORF20066 - 3e-06 27.0 3.1 3e-06 27.0 3.1 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF20066 - 4e-06 27.0 2.7 1.4e-05 25.2 2.7 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF20066 - 4.7e-06 26.2 2.2 4.7e-06 26.2 2.2 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF20066 - 9.9e-06 25.4 2.4 9.9e-06 25.4 2.4 1.7 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF20066 - 3.5e-05 23.7 5.4 7.3e-05 22.7 5.4 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF20066 - 0.00021 21.4 1.5 0.00021 21.4 1.5 1.8 2 1 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 ORF20066 - 0.00032 20.5 3.6 0.00073 19.3 3.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF20066 - 0.011 15.6 2.9 0.011 15.6 2.9 1.8 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 ORF20066 - 0.026 14.3 1.6 0.045 13.6 1.6 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING-like PF08746.11 ORF20066 - 0.033 14.5 1.6 0.072 13.4 1.6 1.6 1 0 0 1 1 1 0 RING-like domain zf-ANAPC11 PF12861.7 ORF20066 - 0.043 13.9 0.8 0.074 13.1 0.8 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF20066 - 0.77 9.7 9.5 0.052 13.4 3.5 2.1 2 1 1 3 3 3 0 Prokaryotic RING finger family 4 Anti-TRAP PF15777.5 ORF18976 - 0.33 11.0 4.5 0.14 12.1 1.3 2.2 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein APC_u15 PF16636.5 ORF18551 - 1.6 9.2 4.5 25 5.4 0.1 2.2 2 0 0 2 2 2 0 Unstructured region on APC between APC_crr regions 5 and 6 SLR1-BP PF07333.12 ORF18199 - 0.81 10.2 8.3 0.43 11.1 4.1 2.3 2 0 0 2 2 2 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Csm1_B PF18211.1 ORF1577 - 0.027 14.3 0.4 0.15 11.9 0.1 2.0 2 0 0 2 2 2 0 Csm1 subunit domain B YqfQ PF14181.6 ORF1577 - 0.22 11.7 4.1 0.32 11.2 4.1 1.4 1 0 0 1 1 1 0 YqfQ-like protein DUF1640 PF07798.11 ORF1577 - 0.74 9.8 9.0 0.8 9.7 8.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) PH PF00169.29 ORF15663 - 2.5e-13 50.5 0.0 3e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF15663 - 0.001 19.5 0.4 0.0019 18.6 0.4 1.6 1 1 0 1 1 1 1 Pleckstrin homology domain PH_8 PF15409.6 ORF15663 - 0.012 15.9 0.1 0.058 13.7 0.1 2.0 1 1 0 1 1 1 0 Pleckstrin homology domain DUF2087 PF09860.9 ORF152106 - 0.063 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) OrfB_IS605 PF01385.19 ORF152106 - 0.25 11.6 3.8 0.24 11.6 2.2 1.8 1 1 1 2 2 2 0 Probable transposase DUF1943 PF09172.11 ORF152014 - 0.019 14.2 3.0 0.022 14.0 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) AAA_32 PF13654.6 ORF152014 - 0.047 12.5 8.9 0.062 12.1 8.9 1.0 1 0 0 1 1 1 0 AAA domain KdpC PF02669.15 ORF152014 - 0.17 11.7 2.2 0.21 11.4 1.1 1.6 1 1 1 2 2 2 0 K+-transporting ATPase, c chain Duffy_binding PF05424.11 ORF152014 - 0.25 11.3 13.4 1.8 8.6 13.4 1.9 1 1 0 1 1 1 0 Duffy binding domain RE_Eco47II PF09553.10 ORF152014 - 1.1 8.8 11.4 1.4 8.5 6.4 2.0 1 1 1 2 2 2 0 Eco47II restriction endonuclease ERp29 PF07749.12 ORF152014 - 1.9 9.5 7.6 0.74 10.8 0.3 2.4 1 1 1 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain DUF3307 PF11750.8 ORF151900 - 0.037 14.1 3.2 0.13 12.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3307) zf-LITAF-like PF10601.9 ORF151663 - 5.7e-12 45.7 15.6 9e-12 45.1 15.6 1.3 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Rb_C PF08934.10 ORF151663 - 0.064 13.1 0.1 0.081 12.7 0.1 1.2 1 0 0 1 1 1 0 Rb C-terminal domain 2OG-FeII_Oxy_3 PF13640.6 ORF151303 - 3.6e-19 69.4 0.1 4.7e-19 69.1 0.1 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF151303 - 1.2e-06 29.0 0.0 1.6e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF151303 - 0.00014 22.3 0.0 0.00018 22.0 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 ORF151303 - 0.0095 16.3 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase Snf7 PF03357.21 ORF151176 - 7.9e-14 51.6 11.1 9.4e-14 51.4 10.6 1.3 1 1 0 1 1 1 1 Snf7 GTP_cyclohydro2 PF00925.20 ORF151176 - 0.022 14.4 0.2 0.052 13.1 0.1 1.6 1 1 1 2 2 2 0 GTP cyclohydrolase II AAA_12 PF13087.6 ORF148127 - 1.3e-36 126.1 0.0 1.7e-36 125.8 0.0 1.0 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 ORF148127 - 0.034 14.0 0.1 0.088 12.6 0.1 1.8 1 1 0 1 1 1 0 UvrD-like helicase C-terminal domain DUF2197 PF09963.9 ORF147813 - 0.03 14.6 0.1 0.048 13.9 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) Gp-FAR-1 PF05823.12 ORF146920 - 0.012 15.9 0.1 0.026 14.9 0.1 1.6 2 0 0 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DUF4200 PF13863.6 ORF146920 - 0.054 13.9 0.9 0.087 13.2 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) CCDC32 PF14989.6 ORF146920 - 0.089 12.8 1.6 0.12 12.3 1.6 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing 32 Ank_4 PF13637.6 ORF145236 - 9.8e-08 32.4 0.3 1.6e-07 31.8 0.3 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF145236 - 4.1e-06 26.7 0.6 0.0058 17.0 0.1 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_2 PF12796.7 ORF145236 - 5.7e-05 23.6 0.1 8.6e-05 23.1 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF145236 - 0.029 14.7 0.1 0.049 14.0 0.1 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 ORF145236 - 0.13 12.7 0.4 11 6.7 0.1 2.4 2 0 0 2 2 2 0 Ankyrin repeat zf-C2H2 PF00096.26 ORF144898 - 2e-18 65.7 16.3 1.6e-06 28.3 2.4 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF144898 - 1.8e-11 43.9 13.7 0.00038 21.1 1.4 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF144898 - 5.4e-11 42.4 13.8 1e-05 25.7 3.1 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF144898 - 5.7e-07 29.2 3.1 5.7e-07 29.2 3.1 3.3 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF144898 - 2.7e-05 24.4 9.0 0.00013 22.2 0.5 2.2 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_jaz PF12171.8 ORF144898 - 0.00054 20.2 1.7 0.00054 20.2 1.7 2.8 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF144898 - 0.001 19.4 11.7 0.019 15.3 0.7 3.4 3 1 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF144898 - 0.0018 18.0 1.6 0.0075 16.0 0.2 2.3 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_2 PF12756.7 ORF144898 - 0.0018 18.6 9.1 0.026 14.9 0.9 2.9 1 1 2 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_6 PF13912.6 ORF144898 - 0.0025 17.8 15.9 0.047 13.7 1.2 3.0 3 1 0 3 3 3 2 C2H2-type zinc finger Mut7-C PF01927.16 ORF144898 - 0.068 13.3 4.5 0.11 12.6 4.5 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.10 ORF144898 - 0.098 12.8 7.3 0.33 11.1 0.4 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zf-Di19 PF05605.12 ORF144898 - 0.19 12.0 3.7 0.16 12.3 1.7 1.9 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zinc_ribbon_15 PF17032.5 ORF144898 - 0.38 11.5 8.8 0.18 12.6 5.9 1.9 1 1 1 2 2 2 0 zinc-ribbon family zf_ZIC PF18366.1 ORF144898 - 0.58 10.3 2.8 3.8 7.7 0.1 2.6 3 0 0 3 3 2 0 Zic proteins zinc finger domain HNH_5 PF14279.6 ORF144898 - 0.73 9.7 5.7 0.59 10.0 2.5 2.3 2 1 0 2 2 2 0 HNH endonuclease PyrI_C PF02748.15 ORF144898 - 0.98 9.4 8.1 4.1 7.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-AN1 PF01428.16 ORF144898 - 1.5 9.0 8.9 9.5 6.5 0.5 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger zf_UBZ PF18439.1 ORF144898 - 1.8 8.2 6.8 4.4 7.0 0.2 3.3 3 1 0 3 3 3 0 Ubiquitin-Binding Zinc Finger C1_2 PF03107.16 ORF144898 - 2.6 8.4 8.4 5.4 7.4 0.2 2.7 3 0 0 3 3 2 0 C1 domain TFIIS_C PF01096.18 ORF144898 - 2.9 7.8 9.5 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) C1_4 PF07975.12 ORF144898 - 3.7 7.8 10.0 31 4.9 7.8 2.7 1 1 2 3 3 3 0 TFIIH C1-like domain zf-C2HE PF16278.5 ORF144898 - 5.7 7.5 9.7 2.9 8.4 2.2 2.7 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger TetR_C_34 PF17929.1 ORF144143 - 0.033 14.3 0.1 0.044 13.9 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain PLAC8 PF04749.17 ORF142404 - 0.2 12.6 7.6 0.34 11.9 7.6 1.4 1 1 0 1 1 1 0 PLAC8 family U-box PF04564.15 ORF141693 - 0.00092 19.3 0.2 0.0014 18.7 0.2 1.4 1 0 0 1 1 1 1 U-box domain DUF123 PF01986.16 ORF141693 - 0.01 16.3 0.1 3.9 8.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function DUF123 zf-Nse PF11789.8 ORF141693 - 0.048 13.5 1.5 0.13 12.1 1.5 2.0 1 1 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit AsnC_trans_reg PF01037.21 ORF141222 - 5.1e-22 77.6 0.0 7.4e-22 77.1 0.0 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 ORF141222 - 1.1e-16 60.1 0.4 1.5e-16 59.6 0.4 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 ORF141222 - 1.1e-16 60.3 0.5 1.7e-16 59.7 0.5 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 ORF141222 - 0.00014 21.8 0.0 0.00021 21.1 0.0 1.2 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.6 ORF141222 - 0.032 14.2 0.0 0.058 13.4 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MarR PF01047.22 ORF141222 - 0.09 12.7 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 MarR family DDRGK PF09756.9 ORF141222 - 0.12 12.0 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 DDRGK domain Fiji_64_capsid PF05880.11 ORF141222 - 0.14 10.8 0.0 0.16 10.6 0.0 1.1 1 0 0 1 1 1 0 Fijivirus 64 kDa capsid protein DUF5312 PF17239.2 ORF140738 - 0.043 12.2 0.2 0.057 11.8 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5312) AvrM_N PF18247.1 ORF140738 - 0.072 13.0 0.7 2 8.4 0.2 2.4 2 0 0 2 2 2 0 Flax-rust effector AvrM N-terminal domain MecA_N PF05223.11 ORF140738 - 0.076 13.3 0.1 0.25 11.6 0.0 1.9 2 0 0 2 2 2 0 NTF2-like N-terminal transpeptidase domain NgoMIV_restric PF09015.10 ORF140530 - 0.039 13.1 0.2 0.047 12.8 0.2 1.2 1 0 0 1 1 1 0 NgoMIV restriction enzyme Csm1_B PF18211.1 ORF140329 - 0.019 14.8 1.2 0.2 11.5 0.1 2.2 1 1 1 2 2 2 0 Csm1 subunit domain B DUF4830 PF16112.5 ORF140329 - 0.094 13.2 0.8 0.16 12.5 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Polo_box_3 PF18544.1 ORF140329 - 1.3 9.7 6.4 0.25 12.0 0.9 2.2 1 1 2 3 3 3 0 Polo box domain DHC PF09626.10 ORF140329 - 1.5 9.7 4.4 1 10.2 1.3 1.9 1 1 1 2 2 2 0 Dihaem cytochrome c tRNA-synt_1c_C PF03950.18 ORF140045 - 0.056 13.3 0.5 0.079 12.8 0.5 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), anti-codon binding domain IPP-2 PF04979.14 ORF139065 - 2.2e-16 60.8 13.4 2.6e-16 60.6 13.4 1.1 1 0 0 1 1 1 1 Protein phosphatase inhibitor 2 (IPP-2) Ldt_C PF17969.1 ORF139065 - 0.029 15.1 0.7 0.12 13.2 0.4 2.1 1 1 1 2 2 2 0 L,D-transpeptidase C-terminal domain DUF3435 PF11917.8 ORF139065 - 0.47 9.3 5.3 0.58 9.0 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) DUF3431 PF11913.8 ORF136102 - 0.00057 19.7 0.0 0.00074 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3431) AsnC_trans_reg PF01037.21 ORF13416 - 4.1e-18 65.1 0.1 7e-18 64.4 0.1 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 ORF13416 - 7.4e-14 51.0 0.0 1.2e-13 50.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 ORF13416 - 2.3e-13 49.7 0.0 4.6e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_20 PF12840.7 ORF13416 - 3.6e-06 26.9 0.0 6.8e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 ORF13416 - 5.5e-05 23.0 0.0 0.00011 22.1 0.0 1.5 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 ORF13416 - 8.8e-05 22.3 0.0 0.00014 21.6 0.0 1.3 1 0 0 1 1 1 1 MarR family B-block_TFIIIC PF04182.12 ORF13416 - 0.0039 17.3 0.1 0.024 14.8 0.0 2.0 2 0 0 2 2 2 1 B-block binding subunit of TFIIIC HTH_5 PF01022.20 ORF13416 - 0.007 16.2 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_28 PF13518.6 ORF13416 - 0.0081 16.3 0.0 0.016 15.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_41 PF14502.6 ORF13416 - 0.0093 15.6 0.1 0.065 12.9 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 ORF13416 - 0.03 14.1 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_10 PF04967.12 ORF13416 - 0.051 13.4 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 HTH DNA binding domain Sigma70_r4_2 PF08281.12 ORF13416 - 0.052 13.2 0.0 0.099 12.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 ORF13416 - 0.059 13.3 0.0 0.093 12.7 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_34 PF13601.6 ORF13416 - 0.06 13.5 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR PF01047.22 ORF13416 - 0.071 13.0 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 MarR family Duffy_binding PF05424.11 ORF133310 - 0.0013 18.8 6.8 0.0016 18.6 6.8 1.1 1 0 0 1 1 1 1 Duffy binding domain EMP24_GP25L PF01105.24 ORF132718 - 7.8e-11 42.2 3.9 9.2e-11 42.0 3.9 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD HEPN_RnaseLS PF18869.1 ORF131795 - 0.095 12.8 0.3 0.15 12.2 0.3 1.3 1 0 0 1 1 1 0 RnaseLS-like HEPN AidB_N PF18158.1 ORF131252 - 0.097 12.6 0.6 0.15 12.0 0.3 1.4 1 1 0 1 1 1 0 Adaptive response protein AidB N-terminal domain VPS13_mid_rpt PF16910.5 ORF130932 - 6.6e-09 35.5 0.1 1e-08 34.9 0.1 1.3 1 1 0 1 1 1 1 Repeating coiled region of VPS13 eIF-5_eIF-2B PF01873.17 ORF129935 - 0.047 13.6 0.4 0.076 12.9 0.4 1.3 1 0 0 1 1 1 0 Domain found in IF2B/IF5 MaoC_dehydrat_N PF13452.6 ORF129393 - 0.18 12.0 0.0 0.25 11.5 0.0 1.1 1 0 0 1 1 1 0 N-terminal half of MaoC dehydratase Pox_polyA_pol_N PF12630.7 ORF124925 - 0.074 13.4 1.0 0.11 12.9 1.0 1.3 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain Yip1 PF04893.17 ORF124641 - 4.8e-07 29.7 15.0 6.6e-07 29.2 15.0 1.2 1 0 0 1 1 1 1 Yip1 domain UPF0640 PF15114.6 ORF124641 - 0.018 14.9 0.6 0.04 13.7 0.4 1.7 1 1 0 1 1 1 0 Uncharacterised protein family UPF0640 NgoMIV_restric PF09015.10 ORF122803 - 0.039 13.1 0.2 0.047 12.8 0.2 1.2 1 0 0 1 1 1 0 NgoMIV restriction enzyme Pkinase PF00069.25 ORF121467 - 5.9e-19 68.5 0.1 6.8e-19 68.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF121467 - 3e-12 46.4 0.0 3.4e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF121467 - 0.034 14.1 0.0 2.5 8.0 0.0 2.0 2 0 0 2 2 2 0 Phosphotransferase enzyme family DUF3431 PF11913.8 ORF121421 - 0.00057 19.7 0.0 0.00074 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3431) ENTH PF01417.20 ORF121209 - 3.3e-18 65.9 0.2 4.8e-18 65.4 0.2 1.2 1 0 0 1 1 1 1 ENTH domain tRNA-synt_1c_C PF03950.18 ORF12043 - 0.056 13.3 0.5 0.079 12.8 0.5 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), anti-codon binding domain Anti-TRAP PF15777.5 ORF120253 - 0.33 11.0 4.5 0.14 12.1 1.3 2.2 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein FA_desaturase PF00487.24 ORF119764 - 7 6.4 10.8 8.1 6.2 10.8 1.2 1 0 0 1 1 1 0 Fatty acid desaturase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks167.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks167.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks167.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks167.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:31 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L24e PF01246.20 ORF118545 - 1.5e-23 82.8 0.3 1.5e-23 82.8 0.3 2.0 2 1 0 2 2 2 1 Ribosomal protein L24e DUF775 PF05603.12 ORF118545 - 0.062 12.8 1.0 0.069 12.7 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF775) GATA PF00320.27 ORF118545 - 0.25 11.0 1.9 0.64 9.7 1.9 1.8 1 1 0 1 1 1 0 GATA zinc finger WAP PF00095.21 ORF118209 - 0.0073 16.7 5.7 0.022 15.2 5.7 1.8 1 0 0 1 1 1 1 WAP-type (Whey Acidic Protein) 'four-disulfide core' Toxin_29 PF08116.11 ORF118209 - 0.039 13.9 3.1 0.11 12.5 3.1 1.8 1 0 0 1 1 1 0 PhTx neurotoxin family CCDC14 PF15254.6 ORF118066 - 0.29 9.8 1.5 0.35 9.5 1.5 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 Phage_integrase PF00589.22 ORF116105 - 0.044 13.6 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 Phage integrase family Birna_VP4 PF01768.16 ORF116105 - 0.12 12.1 1.0 0.17 11.7 1.0 1.1 1 0 0 1 1 1 0 Birnavirus VP4 protein Myf5 PF12232.8 ORF115513 - 0.02 15.6 1.3 0.02 15.6 1.3 1.6 2 0 0 2 2 2 0 Myogenic determination factor 5 MORN PF02493.20 ORF115407 - 4.9e-24 82.7 26.2 1.4e-06 27.8 0.1 5.5 5 1 0 5 5 5 5 MORN repeat IL28A PF15177.6 ORF115335 - 0.65 9.8 8.2 0.72 9.7 7.4 1.5 1 1 0 1 1 1 0 Interleukin-28A Form_Nir_trans PF01226.17 ORF1111 - 0.032 13.6 1.4 0.043 13.1 1.4 1.2 1 0 0 1 1 1 0 Formate/nitrite transporter DUF3298 PF11738.8 ORF109162 - 0.015 16.3 0.1 0.031 15.3 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3298) Exonuc_X-T_C PF08411.10 ORF109162 - 0.02 14.0 0.0 0.026 13.6 0.0 1.1 1 0 0 1 1 1 0 Exonuclease C-terminal Aminotran_5 PF00266.19 ORF108977 - 1.7e-50 172.1 0.0 1.9e-50 171.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V UQ_con PF00179.26 ORF108836 - 2.4e-31 108.2 0.1 2.9e-31 108.0 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF108836 - 0.00014 21.6 0.0 0.00015 21.4 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 ORF108836 - 0.033 14.0 0.0 0.045 13.6 0.0 1.2 1 0 0 1 1 1 0 UEV domain UFC1 PF08694.11 ORF108836 - 0.035 13.7 0.0 0.041 13.5 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-fold modifier-conjugating enzyme 1 Cupin_7 PF12973.7 ORF108708 - 5.7e-09 35.8 0.0 7.6e-09 35.4 0.0 1.2 1 0 0 1 1 1 1 ChrR Cupin-like domain GerPB PF10803.8 ORF107923 - 0.11 12.6 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 Spore germination GerPB Tubulin PF00091.25 ORF106377 - 1.3e-22 80.9 0.0 1.6e-22 80.7 0.0 1.1 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_2 PF13809.6 ORF106377 - 0.077 12.2 0.0 0.091 11.9 0.0 1.1 1 0 0 1 1 1 0 Tubulin like p47_phox_C PF08944.11 ORF103994 - 0.18 11.3 0.1 0.18 11.3 0.1 2.0 2 0 0 2 2 2 0 NADPH oxidase subunit p47Phox, C terminal domain CbtB PF09489.10 ORF10359 - 0.092 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtB) DUF4435 PF14491.6 ORF102088 - 0.008 16.1 3.6 0.0089 16.0 3.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4435) Cytochrom_C1 PF02167.15 ORF102088 - 0.016 15.0 0.2 0.42 10.3 0.2 2.3 1 1 1 2 2 2 0 Cytochrome C1 family DNA_pol3_delta PF06144.13 ORF102088 - 0.029 14.2 0.2 2.5 7.8 0.2 2.2 2 0 0 2 2 2 0 DNA polymerase III, delta subunit Lipase_GDSL_3 PF14606.6 ORF102088 - 0.043 14.0 0.1 0.53 10.4 0.0 2.0 1 1 0 2 2 2 0 GDSL-like Lipase/Acylhydrolase family DUF1065 PF06358.11 ORF102088 - 0.06 13.3 0.0 0.2 11.6 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1065) DUF3630 PF12305.8 ORF102088 - 0.061 13.4 0.1 4.7 7.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3630) DAP PF15228.6 ORF10165 - 0.62 11.3 4.1 0.36 12.0 0.8 2.0 1 1 1 2 2 2 0 Death-associated protein HEXIM PF15313.6 ORF10165 - 4.3 7.5 10.5 1.2 9.3 3.5 2.1 2 0 0 2 2 2 0 Hexamethylene bis-acetamide-inducible protein zf-C2H2 PF00096.26 ORF100495 - 2.9e-18 65.2 19.1 3e-06 27.4 4.8 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF100495 - 7.1e-12 45.1 15.5 0.00059 20.5 2.9 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF100495 - 2.3e-09 37.3 16.5 1.3e-05 25.4 1.2 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF100495 - 0.00022 20.9 5.3 0.00022 20.9 5.3 3.6 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF100495 - 0.00025 21.3 1.3 0.00025 21.3 1.3 2.2 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_jaz PF12171.8 ORF100495 - 0.00055 20.1 2.2 0.00055 20.1 2.2 3.1 2 1 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF100495 - 0.004 17.5 13.1 0.016 15.6 1.0 3.6 3 2 0 3 3 3 1 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF100495 - 0.0058 16.9 12.4 0.13 12.6 3.6 2.9 1 1 2 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 ORF100495 - 0.014 15.1 3.1 0.018 14.8 0.3 2.3 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 ORF100495 - 0.026 14.5 18.0 0.07 13.1 1.6 3.0 3 1 0 3 3 3 0 C2H2-type zinc finger Mut7-C PF01927.16 ORF100495 - 0.089 12.9 5.3 0.13 12.3 5.2 1.5 1 1 0 1 1 1 0 Mut7-C RNAse domain Actin_micro PF17003.5 ORF100495 - 0.1 11.7 9.3 1.1 8.4 2.2 2.2 1 1 1 2 2 2 0 Putative actin-like family Zn-ribbon_8 PF09723.10 ORF100495 - 0.11 12.6 6.6 0.55 10.4 0.3 3.0 3 0 0 3 3 2 0 Zinc ribbon domain DUF629 PF04780.12 ORF100495 - 0.13 10.7 8.7 0.29 9.6 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF629) PriA_CRR PF18319.1 ORF100495 - 0.28 11.2 6.4 0.68 10.0 3.1 2.6 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain PyrI_C PF02748.15 ORF100495 - 0.33 10.9 10.5 1.1 9.3 0.7 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zinc_ribbon_15 PF17032.5 ORF100495 - 0.75 10.6 8.9 0.36 11.6 5.7 2.0 1 1 2 3 3 3 0 zinc-ribbon family zf-AN1 PF01428.16 ORF100495 - 2.3 8.4 9.2 9.4 6.5 0.4 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger zf-C2HE PF16278.5 ORF100495 - 2.7 8.5 11.3 1.7 9.1 3.0 2.7 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger TFIIS_C PF01096.18 ORF100495 - 4.2 7.3 10.5 2.2 8.2 0.5 3.2 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) C1_4 PF07975.12 ORF100495 - 9.8 6.5 9.5 45 4.4 7.1 2.6 1 1 2 3 3 3 0 TFIIH C1-like domain Adeno_E1B_55K_N PF04623.12 ORF100046 - 0.29 11.9 3.1 0.44 11.3 1.5 2.0 1 1 1 2 2 2 0 Adenovirus E1B protein N-terminus FTR PF01913.18 NODE_44173_length_451_cov_2.242788_g36456_i0reverse_frame_1 - 0.035 14.1 0.7 0.049 13.6 0.0 1.5 2 0 0 2 2 2 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase NikR_C PF08753.11 NODE_44163_length_451_cov_2.913462_g36446_i0forward_frame_1 - 0.1 12.8 0.4 0.1 12.8 0.4 1.7 2 0 0 2 2 2 0 NikR C terminal nickel binding domain Chorion_1 PF01723.16 NODE_44159_length_451_cov_3.024038_g36442_i0reverse_frame_1 - 0.0046 16.9 2.2 0.0057 16.6 2.2 1.2 1 0 0 1 1 1 1 Chorion protein Lamprin PF06403.11 NODE_44159_length_451_cov_3.024038_g36442_i0reverse_frame_1 - 0.14 12.1 10.7 0.34 10.9 10.7 1.6 1 1 0 1 1 1 0 Lamprin DUF1272 PF06906.11 NODE_44158_length_451_cov_3.033654_g36441_i0forward_frame_1 - 0.045 13.8 1.2 0.055 13.6 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Gb3_synth PF04572.12 NODE_44158_length_451_cov_3.033654_g36441_i0forward_frame_1 - 0.053 13.7 0.0 0.078 13.1 0.0 1.2 1 0 0 1 1 1 0 Alpha 1,4-glycosyltransferase conserved region PalH PF08733.10 NODE_44154_length_451_cov_5.915865_g36437_i0forward_frame_1 - 0.55 9.2 10.7 0.71 8.8 10.7 1.0 1 0 0 1 1 1 0 PalH/RIM21 Ribosomal_L22e PF01776.17 NODE_44145_length_451_cov_74.848558_g36428_i0reverse_frame_1 - 0.00024 21.5 1.7 0.00024 21.5 1.7 1.9 1 1 1 2 2 2 1 Ribosomal L22e protein family DUF4754 PF15946.5 NODE_44135_length_451_cov_99.360577_g36418_i0forward_frame_1 - 0.098 12.9 0.2 0.16 12.2 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4754) Toxin_9 PF02819.15 NODE_44101_length_452_cov_2.160671_g36386_i0forward_frame_1 - 0.043 14.1 3.6 0.043 14.1 3.6 2.8 3 0 0 3 3 3 0 Spider toxin NPV_P10 PF05531.12 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_1 - 0.021 15.3 0.3 0.04 14.4 0.3 1.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein TMF_DNA_bd PF12329.8 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_1 - 0.024 14.6 1.9 0.05 13.6 1.9 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding ApoO PF09769.9 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_1 - 0.025 14.5 0.3 0.039 13.9 0.3 1.3 1 0 0 1 1 1 0 Apolipoprotein O Gon7 PF08738.10 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_1 - 0.04 14.0 0.0 0.066 13.3 0.0 1.3 1 0 0 1 1 1 0 Gon7 family VasL PF12486.8 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_1 - 0.05 13.5 0.3 0.067 13.0 0.3 1.2 1 0 0 1 1 1 0 Type VI secretion system, EvfB, or VasL ALG11_N PF15924.5 NODE_44097_length_452_cov_2.347722_g36382_i0forward_frame_1 - 0.012 15.6 0.2 0.016 15.3 0.2 1.2 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus BLOC1_2 PF10046.9 NODE_44086_length_452_cov_34.908873_g36371_i0forward_frame_1 - 0.23 11.8 0.0 0.38 11.1 0.0 1.3 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 EOS1 PF12326.8 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 0.18 11.7 1.9 0.2 11.6 1.9 1.2 1 0 0 1 1 1 0 N-glycosylation protein RR_TM4-6 PF06459.12 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 0.35 10.7 14.0 0.41 10.4 14.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF913 PF06025.12 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 0.83 8.6 4.1 0.88 8.5 4.1 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Presenilin PF01080.17 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 0.97 8.1 6.3 1 8.1 6.3 1.1 1 0 0 1 1 1 0 Presenilin YqfQ PF14181.6 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 1.3 9.2 13.2 1.6 8.9 13.2 1.2 1 0 0 1 1 1 0 YqfQ-like protein SpoIIP PF07454.11 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 1.4 8.4 13.8 1.7 8.1 13.8 1.1 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) RNA_pol_Rpc4 PF05132.14 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_1 - 1.9 8.9 16.8 2.9 8.3 16.8 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 PgaD PF13994.6 NODE_44085_length_452_cov_47.863309_g36370_i0forward_frame_1 - 0.03 14.4 0.3 0.03 14.4 0.3 2.4 2 1 0 2 2 2 0 PgaD-like protein OxoDH_E1alpha_N PF12573.8 NODE_44085_length_452_cov_47.863309_g36370_i0forward_frame_1 - 0.12 12.1 0.2 0.22 11.3 0.2 1.4 1 0 0 1 1 1 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal DUF2207 PF09972.9 NODE_44085_length_452_cov_47.863309_g36370_i0forward_frame_1 - 5.6 5.6 11.5 6.4 5.4 11.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ribosomal_60s PF00428.19 NODE_44084_length_452_cov_48.112710_g36369_i0reverse_frame_1 - 0.017 15.7 5.3 0.017 15.7 5.3 1.8 3 0 0 3 3 3 0 60s Acidic ribosomal protein SPT2 PF08243.11 NODE_44070_length_452_cov_102.347722_g36355_i0forward_frame_1 - 2.8e-17 63.2 9.8 3.6e-17 62.9 9.8 1.2 1 0 0 1 1 1 1 SPT2 chromatin protein HUN PF08729.10 NODE_44070_length_452_cov_102.347722_g36355_i0forward_frame_1 - 0.007 16.3 0.6 0.007 16.3 0.6 2.6 2 0 0 2 2 2 1 HPC2 and ubinuclein domain DUF4119 PF13494.6 NODE_44070_length_452_cov_102.347722_g36355_i0forward_frame_1 - 0.44 10.7 5.0 0.13 12.4 1.3 1.9 1 1 1 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF4119) GFD1 PF17331.2 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_1 - 0.31 11.3 0.1 42 4.5 0.0 2.2 2 0 0 2 2 2 0 GFD1 mRNA transport factor zf-TAZ PF02135.16 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_1 - 0.00093 19.6 0.5 1.6 9.2 0.1 2.2 1 1 0 2 2 2 2 TAZ zinc finger PrpR_N PF06506.11 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_1 - 0.058 13.0 1.8 5.3 6.6 0.1 2.1 2 0 0 2 2 2 0 Propionate catabolism activator DUF5368 PF17336.2 NODE_44044_length_453_cov_1.856459_g36331_i0forward_frame_1 - 0.037 14.2 1.3 0.041 14.1 0.3 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5368) CDRN PF05174.12 NODE_44025_length_453_cov_6.074163_g36312_i0forward_frame_1 - 0.1 12.3 0.5 0.28 10.9 0.0 2.0 2 0 0 2 2 2 0 Cysteine-rich D. radiodurans N terminus Swi5 PF07061.11 NODE_44024_length_453_cov_28.026316_g36311_i0reverse_frame_1 - 1.3 9.1 5.1 1 9.5 0.2 2.3 1 1 1 2 2 2 0 Swi5 FliL PF03748.14 NODE_44021_length_453_cov_43.205742_g36308_i0reverse_frame_1 - 0.017 15.7 3.1 0.022 15.3 2.9 1.4 1 1 0 1 1 1 0 Flagellar basal body-associated protein FliL DUF3492 PF11997.8 NODE_44021_length_453_cov_43.205742_g36308_i0reverse_frame_1 - 0.043 13.6 0.6 0.06 13.1 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3492) Ly49 PF08391.10 NODE_44021_length_453_cov_43.205742_g36308_i0reverse_frame_1 - 0.52 10.7 9.3 0.042 14.2 4.7 1.5 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region UnbV_ASPIC PF07593.12 NODE_44011_length_453_cov_77.600478_g36299_i0reverse_frame_1 - 0.084 12.8 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 ASPIC and UnbV Peptidase_S41 PF03572.18 NODE_43988_length_453_cov_132.114833_g36276_i0reverse_frame_1 - 8.1e-08 32.0 0.0 1.2e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S41 Adeno_E1B_55K PF01696.17 NODE_43980_length_453_cov_178.519139_g36268_i0reverse_frame_1 - 0.056 12.1 10.1 0.062 12.0 10.1 1.1 1 0 0 1 1 1 0 Adenovirus EB1 55K protein / large t-antigen UvrA_inter PF17760.1 NODE_43966_length_454_cov_1.663484_g36257_i0reverse_frame_3 - 0.043 13.9 0.0 0.068 13.2 0.0 1.3 1 0 0 1 1 1 0 UvrA interaction domain Orai-1 PF07856.12 NODE_43965_length_454_cov_1.761337_g36256_i0reverse_frame_3 - 0.97 9.1 7.2 1.5 8.4 7.2 1.4 1 0 0 1 1 1 0 Mediator of CRAC channel activity NST1 PF13945.6 NODE_43965_length_454_cov_1.761337_g36256_i0reverse_frame_3 - 1.3 9.1 2.7 2.1 8.4 2.7 1.3 1 0 0 1 1 1 0 Salt tolerance down-regulator Caud_tail_N PF16838.5 NODE_43961_length_454_cov_2.322196_g36252_i0reverse_frame_3 - 0.052 14.0 1.1 0.052 14.0 1.1 2.1 1 1 1 2 2 2 0 Caudoviral major tail protein N-terminus RGI1 PF10843.8 NODE_43947_length_454_cov_3.899761_g36238_i0reverse_frame_2 - 0.045 13.4 1.2 0.26 10.9 0.4 2.0 1 1 1 2 2 2 0 Respiratory growth induced protein 1 Gemini_mov PF01708.16 NODE_43944_length_454_cov_39.250597_g36235_i0reverse_frame_2 - 0.21 11.4 0.5 0.47 10.2 0.5 1.5 1 0 0 1 1 1 0 Geminivirus putative movement protein KcnmB2_inactiv PF09303.10 NODE_43933_length_454_cov_86.210024_g36224_i0forward_frame_3 - 0.2 11.5 0.4 0.39 10.5 0.4 1.4 1 0 0 1 1 1 0 KCNMB2, ball and chain domain FRQ PF09421.10 NODE_43930_length_454_cov_102.000000_g36221_i0reverse_frame_2 - 1.9 6.4 6.4 2.3 6.1 6.4 1.0 1 0 0 1 1 1 0 Frequency clock protein Peptidase_S9 PF00326.21 NODE_43929_length_454_cov_118.646778_g36220_i0reverse_frame_2 - 0.00046 19.7 0.0 0.00078 19.0 0.0 1.4 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 NODE_43929_length_454_cov_118.646778_g36220_i0reverse_frame_2 - 0.0012 18.2 0.0 0.0019 17.5 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 NODE_43929_length_454_cov_118.646778_g36220_i0reverse_frame_2 - 0.047 13.3 0.0 0.068 12.8 0.0 1.3 1 1 0 1 1 1 0 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 NODE_43929_length_454_cov_118.646778_g36220_i0reverse_frame_2 - 0.051 13.7 0.0 0.074 13.2 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein SPO22 PF08631.10 NODE_43929_length_454_cov_118.646778_g36220_i0reverse_frame_2 - 0.13 11.8 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Meiosis protein SPO22/ZIP4 like TetR PF13972.6 NODE_43923_length_454_cov_136.100239_g36214_i0reverse_frame_2 - 0.04 13.6 0.1 0.055 13.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial transcriptional repressor Gypsy PF07253.11 NODE_43921_length_454_cov_138.391408_g36212_i0reverse_frame_3 - 0.016 13.8 0.1 0.019 13.6 0.1 1.1 1 0 0 1 1 1 0 Gypsy protein DUF1935 PF09149.10 NODE_43918_length_454_cov_161.627685_g36209_i0reverse_frame_2 - 0.068 13.6 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1935) DUF2269 PF10027.9 NODE_43914_length_454_cov_270.054893_g36205_i0reverse_frame_3 - 0.068 13.2 1.4 0.42 10.7 0.1 2.0 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2269) DUF3138 PF11336.8 NODE_43914_length_454_cov_270.054893_g36205_i0reverse_frame_3 - 0.2 10.3 10.3 0.21 10.1 10.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Zn_Tnp_IS1 PF03811.13 NODE_43909_length_454_cov_496.930788_g36201_i0forward_frame_3 - 0.13 12.0 3.2 6.2 6.6 1.0 2.7 2 0 0 2 2 2 0 InsA N-terminal domain Ribosomal_S13 PF00416.22 NODE_43909_length_454_cov_496.930788_g36201_i0forward_frame_2 - 0.042 14.2 2.3 0.067 13.6 2.3 1.3 1 0 0 1 1 1 0 Ribosomal protein S13/S18 adh_short PF00106.25 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 1.7e-10 40.7 0.1 2.2e-10 40.4 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 1.4e-05 24.8 0.1 1.9e-05 24.3 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase UDPG_MGDP_dh_N PF03721.14 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.00016 21.3 0.2 0.0002 21.0 0.2 1.1 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KR PF08659.10 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.00079 19.4 0.0 0.0011 19.0 0.0 1.2 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.0036 16.9 0.0 0.0051 16.5 0.0 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.007 16.2 0.0 0.0088 15.8 0.0 1.1 1 0 0 1 1 1 1 N-terminus of Esterase_SGNH_hydro-type ThiF PF00899.21 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.0099 15.3 0.1 2.4 7.5 0.0 2.1 1 1 1 2 2 2 2 ThiF family Sacchrp_dh_NADP PF03435.18 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.04 14.2 0.0 0.057 13.7 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_Gly3P_dh_N PF01210.23 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.045 13.7 0.0 0.055 13.4 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Polysacc_synt_2 PF02719.15 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.049 12.8 0.1 0.058 12.5 0.1 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein LytR_C PF13399.6 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.074 14.0 0.0 0.098 13.7 0.0 1.2 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator 3HCDH_N PF02737.18 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_3 - 0.076 12.9 0.1 0.13 12.2 0.1 1.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DSL PF01414.19 NODE_43905_length_454_cov_1150.389021_g36197_i0reverse_frame_2 - 0.038 14.3 9.7 0.038 14.3 9.7 2.2 1 1 2 3 3 3 0 Delta serrate ligand PsbH PF00737.20 NODE_43903_length_454_cov_2984.291169_g36195_i0reverse_frame_3 - 2.1e-06 27.4 0.2 3.3e-06 26.7 0.2 1.3 1 0 0 1 1 1 1 Photosystem II 10 kDa phosphoprotein Oxidored_q3 PF00499.20 NODE_43903_length_454_cov_2984.291169_g36195_i0reverse_frame_3 - 0.032 14.0 0.2 0.041 13.6 0.2 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DUF3592 PF12158.8 NODE_43903_length_454_cov_2984.291169_g36195_i0reverse_frame_3 - 0.039 14.0 0.1 0.054 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) Ycf70 PF17382.2 NODE_43903_length_454_cov_2984.291169_g36195_i0reverse_frame_3 - 0.069 13.6 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like DUF2713 PF10897.8 NODE_43898_length_455_cov_1.976190_g36191_i0reverse_frame_2 - 1.4e-85 286.7 3.1 1.6e-85 286.5 3.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2713) DUF2633 PF11119.8 NODE_43887_length_455_cov_3.354762_g36180_i0forward_frame_3 - 0.00036 20.4 0.7 0.00036 20.4 0.7 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2633) PTS_2-RNA PF01885.16 NODE_43885_length_455_cov_3.502381_g36178_i0reverse_frame_3 - 3.2e-07 30.6 0.0 4.3e-07 30.2 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family DUF2688 PF10892.8 NODE_43884_length_455_cov_3.564286_g36177_i0reverse_frame_2 - 0.053 13.0 0.0 0.097 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) Mif2_N PF15624.6 NODE_43884_length_455_cov_3.564286_g36177_i0forward_frame_3 - 0.45 11.2 5.2 1.6 9.4 5.0 1.8 1 1 0 1 1 1 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal DUF2244 PF10003.9 NODE_43881_length_455_cov_21.223810_g36174_i0forward_frame_3 - 0.35 10.5 0.1 0.35 10.5 0.1 1.7 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) DUF2614 PF11023.8 NODE_43876_length_455_cov_55.342857_g36169_i0reverse_frame_2 - 0.0067 16.5 0.0 0.012 15.7 0.0 1.4 1 0 0 1 1 1 1 Zinc-ribbon containing domain NDUF_B7 PF05676.13 NODE_43876_length_455_cov_55.342857_g36169_i0forward_frame_3 - 0.0088 15.7 0.0 0.0088 15.7 0.0 1.9 2 0 0 2 2 2 1 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) DUF4905 PF16248.5 NODE_43875_length_455_cov_60.392857_g36168_i0forward_frame_3 - 0.087 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4905) EF-hand_1 PF00036.32 NODE_43875_length_455_cov_60.392857_g36168_i0forward_frame_2 - 0.065 12.8 0.2 0.13 11.9 0.2 1.6 1 0 0 1 1 1 0 EF hand RCC1_2 PF13540.6 NODE_43873_length_455_cov_66.452381_g36166_i0reverse_frame_2 - 2e-07 30.6 2.0 0.015 15.1 0.0 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PIR PF00399.19 NODE_43873_length_455_cov_66.452381_g36166_i0reverse_frame_2 - 4.7 6.9 12.6 23 4.7 0.3 3.6 3 0 0 3 3 3 0 Yeast PIR protein repeat RP854 PF17460.2 NODE_43871_length_455_cov_79.466667_g36164_i0forward_frame_3 - 0.0059 16.4 1.1 0.0072 16.1 1.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein RP854 Scm3 PF10384.9 NODE_43866_length_455_cov_109.009524_g36159_i0reverse_frame_2 - 0.094 12.5 2.6 0.17 11.7 0.8 2.3 2 0 0 2 2 2 0 Centromere protein Scm3 EST1 PF10374.9 NODE_43866_length_455_cov_109.009524_g36159_i0reverse_frame_2 - 0.14 12.8 4.2 0.14 12.8 3.3 1.4 1 1 0 1 1 1 0 Telomerase activating protein Est1 Spore_III_AB PF09548.10 NODE_43866_length_455_cov_109.009524_g36159_i0reverse_frame_2 - 2.6 8.1 6.4 0.31 11.1 2.3 1.7 2 1 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) ACP_syn_III PF08545.10 NODE_43860_length_455_cov_156.116667_g36153_i0forward_frame_3 - 1.8 8.5 3.5 2.1 8.2 0.8 2.0 1 1 1 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DUF1719 PF08224.11 NODE_43860_length_455_cov_156.116667_g36153_i0forward_frame_2 - 0.021 13.9 0.0 0.025 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) DUF4083 PF13314.6 NODE_43860_length_455_cov_156.116667_g36153_i0forward_frame_2 - 1.1 9.3 2.8 2.1 8.3 2.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Polysacc_synt PF01943.17 NODE_43858_length_455_cov_185.566667_g36151_i0reverse_frame_3 - 0.011 15.1 1.0 0.015 14.7 1.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Xan_ur_permease PF00860.20 NODE_43850_length_455_cov_438.826190_g36143_i0reverse_frame_3 - 0.012 14.3 0.3 0.018 13.7 0.3 1.2 1 0 0 1 1 1 0 Permease family PDZ_1 PF12812.7 NODE_43846_length_455_cov_957.414286_g36140_i0forward_frame_3 - 0.013 15.5 0.0 0.024 14.6 0.0 1.5 1 0 0 1 1 1 0 PDZ-like domain SCAB-PH PF17684.1 NODE_43845_length_455_cov_1060.659524_g9099_i1reverse_frame_3 - 0.055 13.7 0.8 0.086 13.1 0.8 1.2 1 0 0 1 1 1 0 PH domain of plant-specific actin-binding protein RPS31 PF17067.5 NODE_43843_length_456_cov_1.700713_g36138_i0forward_frame_2 - 0.043 14.0 0.9 0.043 14.0 0.9 2.2 1 1 1 2 2 2 0 Ribosomal protein S31e Lamprin PF06403.11 NODE_43837_length_456_cov_2.615202_g36132_i0forward_frame_2 - 0.17 11.8 1.6 0.25 11.3 1.6 1.3 1 0 0 1 1 1 0 Lamprin PrkA PF06798.12 NODE_43836_length_456_cov_2.629454_g36131_i0forward_frame_2 - 5.8e-39 134.3 0.7 6.4e-39 134.1 0.7 1.0 1 0 0 1 1 1 1 PrkA serine protein kinase C-terminal domain Med31 PF05669.12 NODE_43836_length_456_cov_2.629454_g36131_i0forward_frame_2 - 0.045 13.8 7.3 0.073 13.1 1.7 2.3 1 1 1 2 2 2 0 SOH1 Na_H_antiport_1 PF06965.12 NODE_43833_length_456_cov_3.159145_g36128_i0reverse_frame_3 - 0.098 11.5 0.0 0.11 11.3 0.0 1.0 1 0 0 1 1 1 0 Na+/H+ antiporter 1 DUF1381 PF07129.11 NODE_43827_length_456_cov_4.109264_g36122_i0forward_frame_2 - 0.098 12.5 0.2 0.21 11.5 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) PARM PF17061.5 NODE_43817_length_456_cov_74.878860_g36112_i0reverse_frame_2 - 0.019 15.1 1.4 0.02 15.1 1.4 1.1 1 0 0 1 1 1 0 PARM DUF563 PF04577.14 NODE_43817_length_456_cov_74.878860_g36112_i0forward_frame_2 - 1.3e-07 31.9 0.0 1.8e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF563) Uroplakin_II PF07353.12 NODE_43817_length_456_cov_74.878860_g36112_i0forward_frame_2 - 0.096 12.2 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Uroplakin II CD36 PF01130.21 NODE_43803_length_456_cov_98.277910_g36098_i0reverse_frame_3 - 0.2 10.1 0.7 0.26 9.8 0.7 1.1 1 0 0 1 1 1 0 CD36 family Rrn6 PF10214.9 NODE_43795_length_456_cov_164.985748_g36091_i0forward_frame_2 - 1.2 7.6 4.7 1.2 7.6 4.7 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF726 PF05277.12 NODE_43791_length_456_cov_193.608076_g36087_i0reverse_frame_2 - 2e-21 76.3 0.0 2.7e-21 75.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF726) PEGA PF08308.11 NODE_43791_length_456_cov_193.608076_g36087_i0forward_frame_3 - 0.097 12.6 0.1 0.21 11.5 0.1 1.5 1 1 0 1 1 1 0 PEGA domain AvrL567-A PF11529.8 NODE_43787_length_456_cov_249.686461_g36083_i0forward_frame_2 - 0.067 13.4 0.1 0.22 11.7 0.1 1.8 1 1 0 1 1 1 0 Melampsora lini avirulence protein AvrL567-A Herpes_U59 PF04529.12 NODE_43777_length_456_cov_815.026128_g36074_i0reverse_frame_3 - 0.16 11.0 2.1 0.2 10.7 2.1 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein DUF979 PF06166.12 NODE_43777_length_456_cov_815.026128_g36074_i0forward_frame_3 - 0.0023 17.2 0.1 0.0023 17.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF979) NCD2 PF04905.13 ORF99372 - 0.028 14.4 0.4 0.05 13.6 0.4 1.4 1 0 0 1 1 1 0 NAB conserved region 2 (NCD2) HEXIM PF15313.6 ORF99372 - 0.097 12.9 4.0 0.16 12.2 4.0 1.4 1 0 0 1 1 1 0 Hexamethylene bis-acetamide-inducible protein PUMA PF15826.5 ORF99272 - 0.003 17.7 0.0 0.0034 17.6 0.0 1.1 1 0 0 1 1 1 1 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis CSD PF00313.22 ORF98964 - 7.3e-18 64.2 0.2 1e-17 63.7 0.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF98964 - 0.028 14.1 0.6 0.049 13.3 0.6 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain Lipoprotein_18 PF06804.11 ORF97348 - 1.1e-55 188.9 0.2 1.3e-55 188.8 0.2 1.0 1 0 0 1 1 1 1 NlpB/DapX lipoprotein WD40 PF00400.32 ORF96176 - 2.3e-08 34.6 1.3 0.0015 19.3 0.0 3.0 3 1 0 3 3 3 2 WD domain, G-beta repeat MARVEL PF01284.23 ORF95218 - 0.39 10.7 8.1 0.85 9.6 8.2 1.4 1 1 0 1 1 1 0 Membrane-associating domain SCAMP PF04144.13 ORF95218 - 0.91 9.8 14.0 2.7 8.3 13.4 1.9 1 1 1 2 2 2 0 SCAMP family DUF2207 PF09972.9 ORF95218 - 1.5 7.5 5.6 1.8 7.2 5.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Prok-E2_A PF14457.6 ORF94670 - 0.072 12.7 0.1 0.24 11.0 0.1 1.7 1 1 1 2 2 2 0 Prokaryotic E2 family A Skp1 PF01466.19 ORF94000 - 0.085 13.0 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Skp1 family, dimerisation domain U-box PF04564.15 ORF91980 - 8.1e-24 83.6 0.1 1.3e-23 82.9 0.1 1.3 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 ORF91980 - 7.3e-06 25.7 0.1 4.6e-05 23.2 0.1 2.0 1 1 1 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 ORF91980 - 2.4e-05 24.2 0.0 4.1e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-NOSIP PF15906.5 ORF91980 - 0.0016 18.5 0.0 0.0028 17.7 0.0 1.4 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein DUF4064 PF13273.6 ORF91980 - 0.046 14.0 0.0 0.06 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) T3SS_NleG PF06416.12 ORF91980 - 0.11 12.4 0.2 0.54 10.2 0.1 1.9 1 1 0 1 1 1 0 Effector protein NleG zf-C3HC4_4 PF15227.6 ORF91980 - 0.2 11.9 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 ORF91980 - 0.21 11.5 0.0 0.3 11.0 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) PRD PF00874.20 ORF9145 - 0.00079 19.7 0.0 0.001 19.3 0.0 1.2 1 0 0 1 1 1 1 PRD domain DUF726 PF05277.12 ORF91392 - 2e-14 53.3 0.0 2.5e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF726) zf-RING_2 PF13639.6 ORF88770 - 4.6e-11 42.9 8.1 6.9e-11 42.3 8.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF88770 - 2.3e-06 27.8 10.1 1.6e-05 25.1 10.1 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF88770 - 1.3e-05 24.9 5.8 2.2e-05 24.2 5.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF88770 - 5.2e-05 23.0 4.3 7.6e-05 22.5 4.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF88770 - 5.8e-05 23.0 7.1 8.7e-05 22.4 7.1 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF88770 - 9.1e-05 22.1 9.6 9.3e-05 22.1 4.8 2.3 2 0 0 2 2 2 1 RING-like zinc finger RINGv PF12906.7 ORF88770 - 0.00069 19.7 6.8 0.0013 18.8 6.8 1.5 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4 PF00097.25 ORF88770 - 0.0011 18.8 6.8 0.0018 18.1 6.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) GMP_PDE_delta PF05351.11 ORF88770 - 0.0036 17.4 0.1 0.0041 17.2 0.1 1.2 1 0 0 1 1 1 1 GMP-PDE, delta subunit zf-RING_UBOX PF13445.6 ORF88770 - 0.0049 16.9 1.6 0.0093 16.0 0.3 2.0 1 1 1 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF88770 - 0.013 15.6 4.4 0.032 14.3 4.4 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF88770 - 0.016 15.3 7.2 0.026 14.7 2.7 2.2 1 1 1 2 2 2 0 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF88770 - 0.11 12.1 6.2 0.19 11.4 6.2 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF88770 - 0.15 11.9 4.3 0.31 10.9 4.1 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 CTU2 PF10288.9 ORF88770 - 0.22 11.8 4.3 3.2 8.0 4.3 2.0 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 zf-RING-like PF08746.11 ORF88770 - 0.32 11.3 6.6 0.57 10.5 6.6 1.4 1 0 0 1 1 1 0 RING-like domain RecR PF02132.15 ORF88770 - 0.41 10.3 3.7 14 5.3 0.1 2.8 2 1 1 3 3 3 0 RecR protein Prok-RING_1 PF14446.6 ORF88770 - 0.45 10.5 8.8 0.53 10.2 1.4 3.1 4 0 0 4 4 4 0 Prokaryotic RING finger family 1 zf-P11 PF03854.14 ORF88770 - 2.7 7.7 7.2 11 5.7 7.4 1.9 1 1 0 1 1 1 0 P-11 zinc finger Guanylin PF02058.15 ORF88746 - 0.0054 17.2 0.0 0.0084 16.6 0.0 1.4 1 0 0 1 1 1 1 Guanylin precursor OS-D PF03392.13 ORF88416 - 0.0019 18.2 0.5 0.0034 17.4 0.5 1.4 1 0 0 1 1 1 1 Insect pheromone-binding family, A10/OS-D POLO_box PF00659.18 ORF87179 - 5.2e-05 23.3 0.4 0.00012 22.2 0.1 1.8 2 1 0 2 2 2 1 POLO box duplicated region DUF807 PF05660.11 ORF86491 - 0.044 13.7 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Coxiella burnetii protein of unknown function (DUF807) GST_N_3 PF13417.6 ORF85843 - 3.9e-10 40.0 0.0 7e-10 39.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF85843 - 1.7e-09 37.8 0.0 3e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF85843 - 8.4e-07 29.2 0.0 2.1e-06 27.9 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain PI3K_P85_iSH2 PF16454.5 ORF84746 - 0.023 14.3 1.0 0.055 13.1 0.2 1.8 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain AbiH PF14253.6 ORF84746 - 0.32 10.8 2.9 0.72 9.7 2.9 1.7 1 1 0 1 1 1 0 Bacteriophage abortive infection AbiH Staphostatin_A PF09022.10 ORF83914 - 0.0032 17.3 0.1 0.0043 16.9 0.1 1.4 1 0 0 1 1 1 1 Staphostatin A Rhomboid_N PF12122.8 ORF83914 - 0.023 14.9 0.0 0.063 13.4 0.0 1.7 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease FF PF01846.19 ORF83914 - 0.036 14.3 0.0 0.068 13.4 0.0 1.5 1 0 0 1 1 1 0 FF domain Agenet PF05641.12 ORF83338 - 0.088 13.3 0.7 16 6.0 0.3 2.4 2 0 0 2 2 2 0 Agenet domain DUF2093 PF09866.9 ORF83338 - 0.2 11.1 1.8 0.35 10.3 1.8 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2093) Molybdop_Fe4S4 PF04879.16 ORF8201 - 0.14 12.1 2.7 1.3 9.1 0.0 2.6 2 1 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain Ecl1 PF12855.7 ORF81297 - 1.9 9.6 10.4 2.5 9.2 10.4 1.2 1 0 0 1 1 1 0 ECL1/2/3 zinc binding proteins FoP_duplication PF13865.6 ORF81297 - 4 8.0 10.2 2.5 8.7 5.2 2.1 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 DUF3795 PF12675.7 ORF81143 - 4.9 7.6 8.8 36 4.9 0.2 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3795) Adeno_PV PF03910.13 ORF80951 - 0.0057 15.4 1.9 0.0069 15.1 1.9 1.1 1 0 0 1 1 1 1 Adenovirus minor core protein PV Notch PF00066.17 ORF80310 - 0.35 11.4 4.6 26 5.4 1.1 3.3 2 1 1 3 3 3 0 LNR domain GYF_2 PF14237.6 ORF8009 - 0.1 12.4 0.2 0.2 11.5 0.2 1.5 1 0 0 1 1 1 0 GYF domain 2 KCT2 PF17818.1 ORF8009 - 0.22 11.6 0.2 0.33 11.1 0.2 1.2 1 0 0 1 1 1 0 Keratinocyte-associated gene product OmpH PF03938.14 ORF79788 - 0.97 9.8 9.5 1.2 9.4 9.5 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) YlqD PF11068.8 ORF79788 - 0.99 9.8 9.1 1.3 9.4 9.1 1.1 1 0 0 1 1 1 0 YlqD protein TRAM_LAG1_CLN8 PF03798.16 ORF78206 - 1e-18 67.8 5.7 1.1e-18 67.7 5.7 1.0 1 0 0 1 1 1 1 TLC domain PIEZO PF15917.5 ORF76804 - 0.0038 16.7 3.1 0.0049 16.4 3.1 1.1 1 0 0 1 1 1 1 Piezo TAF4 PF05236.14 ORF76804 - 0.0053 16.5 4.3 0.0056 16.5 4.3 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID component TAF4 family DNA_pol_phi PF04931.13 ORF76804 - 0.016 13.4 9.7 0.019 13.1 9.7 1.0 1 0 0 1 1 1 0 DNA polymerase phi Vfa1 PF08432.10 ORF76804 - 0.016 15.5 10.4 0.021 15.1 10.4 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF4820 PF16091.5 ORF76804 - 0.033 13.6 2.7 0.041 13.2 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) NOA36 PF06524.12 ORF76804 - 0.15 11.3 6.2 0.17 11.2 6.2 1.1 1 0 0 1 1 1 0 NOA36 protein NapB PF03892.14 ORF76804 - 0.22 11.5 2.6 0.39 10.7 2.6 1.4 1 0 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) FAM176 PF14851.6 ORF76804 - 0.31 10.7 4.1 0.42 10.3 4.1 1.3 1 0 0 1 1 1 0 FAM176 family DUF4481 PF14800.6 ORF76804 - 0.33 10.4 1.0 0.37 10.2 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) U79_P34 PF03064.16 ORF76804 - 0.87 8.9 9.1 1 8.7 9.1 1.1 1 0 0 1 1 1 0 HSV U79 / HCMV P34 AIM3 PF17096.5 ORF76804 - 0.95 10.4 9.9 1.6 9.7 9.9 1.3 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 CDC45 PF02724.14 ORF76804 - 2.1 6.5 8.9 2.4 6.3 8.9 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF4337 PF14235.6 ORF76804 - 2.2 8.4 5.2 2.9 8.0 5.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) EIIBC-GUT_N PF03612.14 ORF76804 - 2.5 7.8 5.7 3.5 7.3 5.7 1.1 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus FAM178 PF14816.6 ORF76804 - 3.5 6.5 9.4 4.7 6.1 9.4 1.1 1 0 0 1 1 1 0 Family of unknown function, FAM178 DUF3987 PF13148.6 ORF76804 - 4.6 6.2 8.7 6.3 5.7 8.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) NinD PF17466.2 ORF7646 - 0.0018 18.3 0.6 0.0043 17.1 0.6 1.6 1 0 0 1 1 1 1 Family of unknown function ERGIC_N PF13850.6 ORF76025 - 0.0033 17.7 0.2 0.0044 17.3 0.2 1.3 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Pkinase PF00069.25 ORF75743 - 1.5e-38 132.7 0.2 1.6e-38 132.6 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF75743 - 6.2e-19 68.3 0.0 7.3e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF75743 - 9e-09 35.0 0.0 1.1e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF75743 - 0.0028 17.0 0.5 0.0044 16.4 0.5 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF75743 - 0.034 12.9 0.1 0.044 12.5 0.1 1.2 1 0 0 1 1 1 0 Fungal protein kinase DUF1803 PF08820.10 ORF75743 - 0.046 13.7 1.5 0.19 11.8 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1803) Choline_kinase PF01633.20 ORF75743 - 0.18 11.4 1.6 0.43 10.1 0.4 1.8 2 0 0 2 2 2 0 Choline/ethanolamine kinase APH PF01636.23 ORF75743 - 0.22 11.4 0.7 0.31 10.9 0.7 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF75743 - 0.47 9.4 5.6 0.083 11.8 2.1 1.5 2 0 0 2 2 2 0 Poxvirus serine/threonine protein kinase Staphostatin_A PF09022.10 ORF75452 - 0.0032 17.3 0.1 0.0043 16.9 0.1 1.4 1 0 0 1 1 1 1 Staphostatin A Rhomboid_N PF12122.8 ORF75452 - 0.023 14.9 0.0 0.063 13.4 0.0 1.8 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease FF PF01846.19 ORF75452 - 0.036 14.3 0.0 0.068 13.4 0.0 1.5 1 0 0 1 1 1 0 FF domain DUF3755 PF12579.8 ORF75025 - 0.38 10.4 2.0 8.3 6.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3755) DUF3565 PF12088.8 ORF73338 - 0.26 11.3 2.0 3 7.9 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3565) zf-RING_2 PF13639.6 ORF7309 - 4.6e-11 42.9 8.1 6.9e-11 42.3 8.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF7309 - 2.3e-06 27.8 10.1 1.6e-05 25.1 10.1 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF7309 - 1.3e-05 24.9 5.8 2.2e-05 24.2 5.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF7309 - 5.2e-05 23.0 4.3 7.6e-05 22.5 4.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF7309 - 5.8e-05 23.0 7.1 8.7e-05 22.4 7.1 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF7309 - 9.1e-05 22.1 9.6 9.3e-05 22.1 4.8 2.3 2 0 0 2 2 2 1 RING-like zinc finger RINGv PF12906.7 ORF7309 - 0.00069 19.7 6.8 0.0013 18.8 6.8 1.5 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4 PF00097.25 ORF7309 - 0.0011 18.8 6.8 0.0018 18.1 6.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) GMP_PDE_delta PF05351.11 ORF7309 - 0.0036 17.4 0.1 0.0041 17.2 0.1 1.2 1 0 0 1 1 1 1 GMP-PDE, delta subunit zf-RING_UBOX PF13445.6 ORF7309 - 0.0049 16.9 1.6 0.0093 16.0 0.3 2.0 1 1 1 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF7309 - 0.013 15.6 4.4 0.032 14.3 4.4 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF7309 - 0.016 15.3 7.2 0.026 14.7 2.7 2.2 1 1 1 2 2 2 0 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF7309 - 0.11 12.1 6.2 0.19 11.4 6.2 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF7309 - 0.15 11.9 4.3 0.31 10.9 4.1 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 CTU2 PF10288.9 ORF7309 - 0.22 11.8 4.3 3.2 8.0 4.3 2.0 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 zf-RING-like PF08746.11 ORF7309 - 0.32 11.3 6.6 0.57 10.5 6.6 1.4 1 0 0 1 1 1 0 RING-like domain RecR PF02132.15 ORF7309 - 0.41 10.3 3.7 14 5.3 0.1 2.8 2 1 1 3 3 3 0 RecR protein Prok-RING_1 PF14446.6 ORF7309 - 0.45 10.5 8.8 0.53 10.2 1.4 3.1 4 0 0 4 4 4 0 Prokaryotic RING finger family 1 zf-P11 PF03854.14 ORF7309 - 2.7 7.7 7.2 11 5.7 7.4 1.9 1 1 0 1 1 1 0 P-11 zinc finger DUF5527 PF17665.1 ORF72242 - 0.22 11.1 7.7 0.39 10.3 7.7 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5527) PfkB PF00294.24 ORF68507 - 2.7e-37 128.7 0.2 2.9e-37 128.6 0.2 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF68507 - 8.4e-06 25.3 0.0 1.1e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase MORN PF02493.20 ORF66015 - 4.3e-14 51.5 16.4 9.8e-08 31.5 0.7 3.8 4 0 0 4 4 4 3 MORN repeat Peptidase_M11 PF05548.11 ORF660 - 0.059 12.5 0.1 0.073 12.2 0.1 1.1 1 0 0 1 1 1 0 Gametolysin peptidase M11 Macoilin PF09726.9 ORF65840 - 1.7 7.1 28.2 1.8 7.0 28.2 1.1 1 0 0 1 1 1 0 Macoilin family CobU PF02283.16 ORF65182 - 1.6e-12 47.3 0.0 2.2e-12 46.9 0.0 1.2 1 0 0 1 1 1 1 Cobinamide kinase / cobinamide phosphate guanyltransferase GDP_Man_Dehyd PF16363.5 ORF64524 - 0.044 13.2 0.1 0.05 13.0 0.1 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase ERGIC_N PF13850.6 ORF64273 - 0.0033 17.7 0.2 0.0044 17.3 0.2 1.3 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Oxidored_FMN PF00724.20 ORF62451 - 2.3e-05 23.8 0.0 3.1e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks168.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks168.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks168.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks168.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Amidase_2 PF01510.25 ORF61258 - 8.1e-19 68.3 0.1 1e-18 68.0 0.1 1.1 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase Ribosomal_S13_N PF08069.12 ORF61205 - 6.6e-31 106.1 0.0 1.8e-30 104.7 0.0 1.7 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 ORF61205 - 2e-13 50.4 0.4 3.1e-13 49.7 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 Ketoacyl-synt_C PF02801.22 ORF60792 - 1.3e-37 128.4 1.4 1.6e-37 128.2 1.4 1.1 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 ORF60792 - 0.023 15.2 0.2 0.082 13.4 0.0 1.9 2 0 0 2 2 2 0 Ketoacyl-synthetase C-terminal extension pXO2-72 PF17443.2 ORF57834 - 0.044 14.0 0.1 0.083 13.2 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein pXO2-72 DUF3810 PF12725.7 ORF55446 - 0.056 12.8 0.0 0.059 12.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) ARL6IP6 PF15062.6 ORF55446 - 0.086 13.0 1.1 2.3 8.4 0.2 2.8 2 1 1 3 3 3 0 Haemopoietic lineage transmembrane helix TMEM70 PF06979.12 ORF54306 - 7.4 7.0 8.1 0.29 11.6 0.3 2.2 1 1 1 2 2 2 0 Assembly, mitochondrial proton-transport ATP synth complex Mtr2 PF10429.9 ORF52122 - 0.18 11.7 0.0 0.23 11.4 0.0 1.1 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 HscB_4_cys PF18256.1 ORF50010 - 0.18 11.7 0.7 0.18 11.7 0.7 2.9 3 1 0 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif zf-CCCH PF00642.24 ORF48423 - 0.00019 21.3 4.0 0.00019 21.3 4.0 2.0 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) DAG_kinase_N PF14513.6 ORF48423 - 0.024 14.9 3.5 0.031 14.5 3.5 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus zf_CCCH_4 PF18345.1 ORF48423 - 0.16 12.1 7.2 0.18 11.9 5.5 2.0 2 0 0 2 2 2 0 Zinc finger domain Connexin PF00029.19 ORF48423 - 4.5 7.0 4.8 5.7 6.6 4.8 1.3 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 ORF48423 - 5.2 5.7 8.8 6.3 5.5 8.8 1.0 1 0 0 1 1 1 0 Presenilin DUF4708 PF15813.5 ORF47538 - 0.1 11.7 0.2 0.33 10.0 0.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4708) HTH_23 PF13384.6 ORF46207 - 0.086 12.7 0.0 0.24 11.2 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain Peptidase_C41 PF05417.11 ORF43287 - 0.063 13.1 0.0 0.097 12.5 0.0 1.2 1 0 0 1 1 1 0 Hepatitis E cysteine protease PdaC PF13739.6 ORF41629 - 0.12 13.4 1.7 0.18 12.8 1.6 1.5 1 1 0 1 1 1 0 Deacetylase PdaC SET PF00856.28 ORF40785 - 0.0017 18.8 0.0 0.003 18.0 0.0 1.3 1 0 0 1 1 1 1 SET domain COPIIcoated_ERV PF07970.12 ORF39937 - 2.7e-11 43.8 0.1 3.4e-11 43.4 0.1 1.1 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter LEAP-2 PF07359.11 ORF38544 - 0.1 12.4 1.7 0.17 11.7 0.5 1.9 1 1 1 2 2 2 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) PSI_PsaE PF02427.17 ORF3735 - 0.01 15.5 0.3 0.028 14.1 0.2 1.8 2 0 0 2 2 2 0 Photosystem I reaction centre subunit IV / PsaE UQ_con PF00179.26 ORF36014 - 7.2e-32 109.9 0.1 8.6e-32 109.7 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF36014 - 0.0012 19.2 0.1 0.0016 18.7 0.1 1.2 1 0 0 1 1 1 1 RWD domain B-block_TFIIIC PF04182.12 ORF35377 - 0.05 13.8 0.6 0.1 12.8 0.1 1.7 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC PI3_PI4_kinase PF00454.27 ORF344 - 5.2e-13 49.4 0.0 7.3e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase zf-RING_2 PF13639.6 ORF344 - 0.0013 19.1 4.5 0.084 13.2 0.1 2.5 3 0 0 3 3 3 2 Ring finger domain zf-C3HC4_2 PF13923.6 ORF344 - 0.042 13.7 2.4 1.5 8.8 0.1 2.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) C1_1 PF00130.22 ORF344 - 0.07 13.0 2.1 3 7.8 0.2 2.2 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) FANCL_C PF11793.8 ORF344 - 0.075 13.2 0.1 0.075 13.2 0.1 2.1 3 0 0 3 3 3 0 FANCL C-terminal domain RINGv PF12906.7 ORF344 - 0.53 10.5 2.9 0.6 10.3 0.1 2.3 2 1 0 2 2 2 0 RING-variant domain K1 PF02960.14 ORF33940 - 0.077 13.1 0.8 0.57 10.3 0.1 2.0 2 0 0 2 2 2 0 K1 glycoprotein Cpn10 PF00166.21 ORF33517 - 0.0012 18.9 0.1 15 5.7 0.0 3.1 2 1 1 3 3 3 3 Chaperonin 10 Kd subunit TPR_19 PF14559.6 ORF29327 - 0.084 13.4 0.0 0.13 12.8 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat SopE_GEF PF07487.13 ORF29327 - 0.11 12.6 0.0 0.23 11.6 0.0 1.5 1 1 0 1 1 1 0 SopE GEF domain ATP-synt_C PF00137.21 ORF28250 - 7.1e-09 35.9 10.9 1.2e-08 35.1 10.9 1.4 1 0 0 1 1 1 1 ATP synthase subunit C HlyIII PF03006.20 ORF28250 - 0.046 13.4 0.2 0.069 12.8 0.2 1.5 1 1 0 1 1 1 0 Haemolysin-III related DUF3810 PF12725.7 ORF2617 - 0.039 13.3 0.1 0.042 13.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) ARL6IP6 PF15062.6 ORF2617 - 0.14 12.3 0.9 2.2 8.5 0.2 2.5 1 1 1 2 2 2 0 Haemopoietic lineage transmembrane helix LysM PF01476.20 ORF25738 - 7.4e-30 102.8 0.2 1.5e-15 57.0 0.1 2.3 2 0 0 2 2 2 2 LysM domain OapA PF04225.12 ORF25738 - 1.2e-05 25.3 0.1 0.12 12.5 0.0 2.6 2 1 0 2 2 2 2 Opacity-associated protein A LysM-like domain HTH_Tnp_1 PF01527.20 ORF25738 - 1.3e-05 25.5 0.0 0.034 14.5 0.0 2.3 2 0 0 2 2 2 2 Transposase DUF3071 PF11268.8 ORF25738 - 0.0046 17.0 0.0 0.4 10.7 0.0 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF3071) PDZ_2 PF13180.6 ORF25738 - 0.011 16.0 0.4 2.6 8.4 0.1 2.3 1 1 1 2 2 2 0 PDZ domain HTH_Tnp_ISL3 PF13542.6 ORF25738 - 0.024 14.0 0.3 2.6 7.5 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 ORF25738 - 0.026 14.3 0.1 8.8 6.3 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain HTH_28 PF13518.6 ORF25738 - 0.056 13.6 0.1 13 6.0 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain DUF1804 PF08822.11 ORF25738 - 0.075 13.0 0.0 11 6.0 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1804) DUF3918 PF13056.6 ORF25738 - 0.081 12.6 0.1 0.24 11.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) HTH_38 PF13936.6 ORF25738 - 0.098 12.4 0.0 13 5.6 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Fer2_4 PF13510.6 ORF25738 - 0.098 12.7 0.0 12 6.0 0.0 2.3 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain BrkDBD PF09607.10 ORF25738 - 0.11 12.3 0.0 12 5.7 0.0 2.4 2 0 0 2 2 2 0 Brinker DNA-binding domain LTD PF00932.19 ORF25738 - 0.12 12.8 0.7 0.31 11.4 0.7 1.9 1 1 0 1 1 1 0 Lamin Tail Domain zf-RING_5 PF14634.6 ORF2560 - 0.017 15.0 5.5 0.12 12.3 5.5 2.4 1 1 0 1 1 1 0 zinc-RING finger domain TylF PF05711.11 ORF24914 - 0.00017 20.9 0.0 0.00021 20.7 0.0 1.1 1 0 0 1 1 1 1 Macrocin-O-methyltransferase (TylF) HHH_9 PF17674.1 ORF2414 - 0.56 11.1 5.1 1.3 10.0 0.1 2.3 1 1 1 2 2 2 0 HHH domain CLZ PF16526.5 ORF2414 - 1.4 9.3 9.1 0.39 11.1 1.6 2.7 1 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels YkuI_C PF10388.9 ORF2414 - 4 7.2 9.1 2.4 7.9 4.1 2.0 2 0 0 2 2 2 0 EAL-domain associated signalling protein domain RRT14 PF17075.5 ORF2414 - 8.4 6.5 21.6 26 4.9 21.6 1.7 1 1 0 1 1 1 0 Regular of rDNA transcription protein 14 PgaD PF13994.6 ORF23171 - 9.4 6.3 8.9 1.6 8.8 0.1 2.5 2 1 1 3 3 3 0 PgaD-like protein Oest_recep PF02159.15 ORF21719 - 0.097 13.2 4.6 0.14 12.7 4.6 1.3 1 0 0 1 1 1 0 Oestrogen receptor Hydrophobin_2 PF06766.11 ORF21350 - 0.015 15.2 3.8 0.015 15.2 3.8 2.1 2 1 0 2 2 2 0 Fungal hydrophobin WRC PF08879.10 ORF20647 - 0.28 10.9 1.1 2.1 8.1 0.4 2.2 2 0 0 2 2 2 0 WRC MTHFR_C PF12225.8 ORF20497 - 0.49 10.1 0.1 0.49 10.1 0.1 2.1 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal Oest_recep PF02159.15 ORF18012 - 0.097 13.2 4.6 0.14 12.7 4.6 1.3 1 0 0 1 1 1 0 Oestrogen receptor RSRP PF17069.5 ORF1614 - 2.3 7.7 7.1 1.3 8.5 5.0 1.6 1 1 0 1 1 1 0 Arginine/Serine-Rich protein 1 ubiquitin PF00240.23 ORF15357 - 0.00023 20.8 0.3 0.00039 20.1 0.1 1.5 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF15357 - 0.00044 20.0 0.2 0.00066 19.5 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like RDD PF06271.12 ORF151312 - 0.049 13.8 1.3 0.049 13.8 1.3 2.1 2 0 0 2 2 2 0 RDD family Myticin-prepro PF10690.9 ORF149952 - 2.3 8.5 10.2 0.23 11.7 5.6 1.8 2 0 0 2 2 2 0 Myticin pre-proprotein from the mussel DUF4923 PF16270.5 ORF149905 - 0.057 13.3 0.1 0.074 12.9 0.1 1.2 1 0 0 1 1 1 0 Lipocalin-like domain (DUF4923) MORN_2 PF07661.13 ORF149905 - 0.36 11.2 6.5 2.6 8.6 0.2 3.6 3 0 0 3 3 3 0 MORN repeat variant MORN PF02493.20 ORF149905 - 0.72 9.9 4.6 43 4.3 0.0 3.7 3 0 0 3 3 3 0 MORN repeat TT_ORF1 PF02956.14 ORF147550 - 3.8 6.1 16.3 3.6 6.1 16.3 1.1 1 0 0 1 1 1 0 TT viral orf 1 Pkinase PF00069.25 ORF146825 - 6.2e-16 58.6 0.0 7.1e-16 58.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF146825 - 5.9e-08 32.3 0.0 6.1e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF146825 - 1e-07 31.1 0.0 1.1e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF146825 - 0.00028 20.9 0.0 0.00052 20.0 0.0 1.5 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF146825 - 0.0015 17.6 0.2 0.0018 17.3 0.2 1.1 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Choline_kinase PF01633.20 ORF146825 - 0.034 13.7 0.2 0.047 13.3 0.2 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 ORF146825 - 0.12 11.7 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family PHD PF00628.29 ORF146230 - 1.2e-10 41.2 11.1 1.2e-10 41.2 11.1 1.6 2 0 0 2 2 2 1 PHD-finger Zf_RING PF16744.5 ORF146230 - 0.24 11.5 10.3 0.15 12.2 7.9 1.9 2 1 0 2 2 2 0 KIAA1045 RING finger zf-HC5HC2H PF13771.6 ORF146230 - 0.54 10.6 11.6 0.3 11.3 8.6 2.1 2 1 0 2 2 2 0 PHD-like zinc-binding domain Staphostatin_A PF09022.10 ORF145196 - 0.0032 17.3 0.1 0.0043 16.9 0.1 1.4 1 0 0 1 1 1 1 Staphostatin A Rhomboid_N PF12122.8 ORF145196 - 0.023 14.9 0.0 0.063 13.4 0.0 1.8 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease FF PF01846.19 ORF145196 - 0.036 14.3 0.0 0.068 13.4 0.0 1.5 1 0 0 1 1 1 0 FF domain ERGIC_N PF13850.6 ORF144929 - 0.0033 17.7 0.2 0.0044 17.3 0.2 1.3 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Carla_C4 PF01623.17 ORF143128 - 0.14 12.1 3.4 7.9 6.5 1.0 2.2 2 0 0 2 2 2 0 Carlavirus putative nucleic acid binding protein zf-H2C2_2 PF13465.6 ORF142141 - 8.6 7.0 7.0 29 5.3 3.4 2.5 2 1 0 2 2 2 0 Zinc-finger double domain FRP PF18032.1 ORF141878 - 0.04 14.5 0.8 0.18 12.4 0.6 1.9 1 1 1 2 2 2 0 Photoprotection regulator fluorescence recovery protein UBA PF00627.31 ORF141480 - 0.0067 16.3 0.1 0.012 15.5 0.1 1.4 1 0 0 1 1 1 1 UBA/TS-N domain DUF5310 PF17237.2 ORF141359 - 0.38 10.7 7.2 0.32 10.9 5.7 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5310) Acetyltransf_1 PF00583.25 ORF140369 - 1.1e-16 61.2 0.0 1.3e-16 60.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF140369 - 9.2e-14 51.5 0.0 1.1e-13 51.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF140369 - 2.7e-11 43.7 0.0 3.7e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF140369 - 1.9e-07 30.9 0.0 2.7e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF140369 - 8.4e-07 29.1 0.0 1.1e-06 28.7 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF140369 - 0.00014 21.9 0.0 0.00022 21.3 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 ORF140369 - 0.00044 20.9 0.0 0.00047 20.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 ORF140369 - 0.031 14.0 0.0 0.041 13.6 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ NCE101 PF11654.8 ORF140012 - 0.069 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Non-classical export protein 1 Ribosomal_L40e PF01020.17 ORF139878 - 0.073 13.0 0.6 0.18 11.7 0.6 1.6 1 0 0 1 1 1 0 Ribosomal L40e family Rav1p_C PF12234.8 ORF139831 - 0.019 13.4 0.1 0.023 13.1 0.1 1.1 1 0 0 1 1 1 0 RAVE protein 1 C terminal Ribosomal_S13_N PF08069.12 ORF139763 - 5.2e-27 93.7 1.3 9.6e-27 92.8 0.2 2.0 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 ORF139763 - 2.3e-13 50.1 1.4 2.3e-13 50.1 1.4 1.6 2 0 0 2 2 2 1 Ribosomal protein S15 GTP_cyclohydroI PF01227.22 ORF139763 - 0.073 12.5 0.2 0.41 10.0 0.0 2.2 2 1 1 3 3 3 0 GTP cyclohydrolase I YflT PF11181.8 ORF139763 - 0.1 13.1 0.0 0.13 12.7 0.0 1.4 1 1 0 1 1 1 0 Heat induced stress protein YflT zf-dskA_traR PF01258.17 ORF135424 - 1.7e-10 40.7 3.3 2.6e-10 40.1 3.3 1.3 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger DZR PF12773.7 ORF135424 - 0.068 13.2 0.2 0.12 12.4 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon FAM165 PF14981.6 ORF135424 - 0.14 12.0 0.5 3.9 7.4 0.0 2.4 2 0 0 2 2 2 0 FAM165 family DUF2417 PF10329.9 ORF135118 - 0.0048 16.3 9.0 0.0053 16.2 9.0 1.2 1 0 0 1 1 1 1 Region of unknown function (DUF2417) Bunya_G2 PF03563.13 ORF134356 - 9.3 5.4 6.2 32 3.7 0.4 2.7 1 1 2 3 3 3 0 Bunyavirus glycoprotein G2 TRI5 PF06330.11 ORF13335 - 0.17 10.7 0.0 0.22 10.4 0.0 1.1 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) DUF3755 PF12579.8 ORF133080 - 0.38 10.4 2.0 8.3 6.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3755) DUF412 PF04217.13 ORF129107 - 3.8e-57 192.1 0.2 4.3e-57 192.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF412 UQ_con PF00179.26 ORF12812 - 4.3e-16 58.8 0.0 4.5e-16 58.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 ORF12812 - 0.061 13.2 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 UEV domain RWD PF05773.22 ORF12812 - 0.085 13.2 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 RWD domain OST_P2 PF18235.1 ORF12812 - 0.1 12.5 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Oligosaccharyltransferase Peripheral 2 domain DHHC PF01529.20 ORF127154 - 3.9e-15 56.1 13.1 7e-15 55.3 13.1 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase DAGK_prokar PF01219.19 ORF127154 - 0.1 12.5 0.0 0.22 11.3 0.0 1.5 2 0 0 2 2 2 0 Prokaryotic diacylglycerol kinase vMSA PF00695.19 ORF127154 - 1.1 8.3 3.2 1.6 7.8 3.2 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF4763 PF15960.5 ORF126471 - 0.0035 16.7 0.7 0.0048 16.2 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) Sep15_SelM PF08806.11 ORF126236 - 0.0028 17.8 0.0 0.0044 17.2 0.0 1.3 1 0 0 1 1 1 1 Sep15/SelM redox domain Mac PF12464.8 ORF126236 - 0.32 11.3 0.1 0.32 11.3 0.1 1.6 2 0 0 2 2 2 0 Maltose acetyltransferase Rhomboid PF01694.22 ORF125835 - 3.6e-07 30.3 10.0 4.2e-07 30.1 10.0 1.0 1 0 0 1 1 1 1 Rhomboid family zinc-ribbons_6 PF07191.12 ORF123536 - 0.091 12.8 2.5 0.26 11.3 0.1 2.3 2 1 0 2 2 2 0 zinc-ribbons UPF0547 PF10571.9 ORF123536 - 7.7 6.7 7.4 14 5.9 0.1 2.9 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 DEAD PF00270.29 ORF122130 - 8.2e-21 74.6 0.0 1.1e-20 74.2 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase CMS1 PF14617.6 ORF122130 - 0.0014 18.0 0.0 0.0017 17.8 0.0 1.1 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit NDK PF00334.19 ORF122130 - 0.01 15.9 0.1 0.63 10.1 0.0 2.1 2 0 0 2 2 2 0 Nucleoside diphosphate kinase DUF717 PF05338.12 ORF122130 - 0.013 15.6 0.0 4.3 7.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF717) AAA_22 PF13401.6 ORF122130 - 0.12 12.7 0.0 0.19 12.0 0.0 1.4 1 1 0 1 1 1 0 AAA domain DUF3343 PF11823.8 ORF120286 - 0.038 13.5 0.9 0.51 9.8 0.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3343) Rav1p_C PF12234.8 ORF119617 - 0.031 12.7 3.6 0.032 12.6 3.6 1.2 1 0 0 1 1 1 0 RAVE protein 1 C terminal Minor_tail_Z PF06763.11 ORF119617 - 0.1 12.4 3.0 0.13 12.0 3.0 1.1 1 0 0 1 1 1 0 Prophage minor tail protein Z (GPZ) ArAE_2_N PF10337.9 ORF119617 - 0.13 11.3 1.2 0.12 11.4 1.2 1.2 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal Methyltransf_31 PF13847.6 ORF118204 - 0.046 13.5 0.0 0.051 13.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain RadC PF04002.15 ORF117815 - 0.022 14.7 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 RadC-like JAB domain Ycf70 PF17382.2 ORF115436 - 0.17 12.3 0.0 0.17 12.3 0.0 1.8 1 1 0 2 2 2 0 Uncharacterized Ycf70-like HemY_N PF07219.13 ORF1135 - 0.14 12.4 0.6 0.22 11.7 0.6 1.3 1 0 0 1 1 1 0 HemY protein N-terminus DUF3810 PF12725.7 ORF112303 - 0.056 12.8 0.0 0.059 12.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) ARL6IP6 PF15062.6 ORF112303 - 0.086 13.0 1.1 2.3 8.4 0.2 2.8 2 1 1 3 3 3 0 Haemopoietic lineage transmembrane helix ERGIC_N PF13850.6 ORF111027 - 0.0033 17.7 0.2 0.0044 17.3 0.2 1.3 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) VWC PF00093.18 ORF109659 - 0.016 15.5 17.1 0.063 13.6 3.8 2.2 2 0 0 2 2 2 0 von Willebrand factor type C domain U-box PF04564.15 ORF109213 - 8.1e-24 83.6 0.1 1.3e-23 82.9 0.1 1.3 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 ORF109213 - 7.3e-06 25.7 0.1 4.6e-05 23.2 0.1 2.0 1 1 1 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 ORF109213 - 2.4e-05 24.2 0.0 4.1e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-NOSIP PF15906.5 ORF109213 - 0.0015 18.6 0.0 0.0028 17.7 0.0 1.5 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein DUF4064 PF13273.6 ORF109213 - 0.045 14.0 0.0 0.06 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) T3SS_NleG PF06416.12 ORF109213 - 0.11 12.4 0.2 0.54 10.2 0.1 1.9 1 1 0 1 1 1 0 Effector protein NleG zf-C3HC4_4 PF15227.6 ORF109213 - 0.2 11.9 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 ORF109213 - 0.2 11.5 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RAP PF08373.10 ORF106383 - 0.21 11.7 0.0 0.38 10.9 0.0 1.4 1 0 0 1 1 1 0 RAP domain Protocadherin PF08374.11 ORF105917 - 0.13 12.2 0.0 3.9 7.4 0.0 2.0 1 1 1 2 2 2 0 Protocadherin DUF2556 PF10831.8 ORF105917 - 3.3 7.7 6.9 25 4.9 6.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2556) Rap1a PF18602.1 ORF104828 - 0.17 12.2 0.0 0.29 11.5 0.0 1.4 1 0 0 1 1 1 0 Rap1a immunity proteins zf-RING_2 PF13639.6 ORF104089 - 5.7e-10 39.4 12.1 5.7e-10 39.4 12.1 2.3 3 0 0 3 3 3 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF104089 - 4e-06 26.7 16.0 0.00032 20.7 5.7 2.5 2 0 0 2 2 2 2 RING-type zinc-finger zf-RING_11 PF17123.5 ORF104089 - 7.3e-05 22.4 7.9 7.3e-05 22.4 7.9 2.7 2 1 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF104089 - 9.3e-05 22.2 7.0 9.3e-05 22.2 7.0 2.5 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF104089 - 0.00031 20.5 10.4 0.00031 20.5 10.4 1.9 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF104089 - 0.00061 19.7 9.0 0.00061 19.7 9.0 2.8 2 1 1 3 3 3 1 zinc-RING finger domain CSRNP_N PF16019.5 ORF104089 - 0.016 15.2 5.5 0.016 15.2 5.5 1.8 2 0 0 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus zf-C3HC4_2 PF13923.6 ORF104089 - 0.031 14.1 12.6 0.031 14.1 12.6 2.7 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF104089 - 0.047 13.5 12.8 0.11 12.3 8.0 2.6 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-rbx1 PF12678.7 ORF104089 - 0.46 10.8 17.6 0.065 13.5 12.9 2.0 1 1 1 2 2 2 0 RING-H2 zinc finger domain RSRP PF17069.5 ORF10383 - 2.3 7.7 7.1 1.3 8.5 5.0 1.6 1 1 0 1 1 1 0 Arginine/Serine-Rich protein 1 DUF2256 PF10013.9 ORF102718 - 0.043 13.9 0.4 0.11 12.7 0.4 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) LigT_PEase PF02834.16 ORF100759 - 0.029 14.6 0.0 0.042 14.0 0.0 1.3 1 0 0 1 1 1 0 LigT like Phosphoesterase DUF4231 PF14015.6 NODE_44354_length_448_cov_2.290557_g36624_i0forward_frame_1 - 0.17 12.4 3.7 0.95 10.0 3.7 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) YkuD PF03734.14 NODE_44345_length_448_cov_3.113801_g36615_i0reverse_frame_1 - 1e-07 32.5 0.1 1.2e-07 32.3 0.1 1.1 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain LysM PF01476.20 NODE_44345_length_448_cov_3.113801_g36615_i0reverse_frame_1 - 1.4e-07 31.4 0.0 3e-07 30.4 0.0 1.6 1 0 0 1 1 1 1 LysM domain OB_NTP_bind PF07717.16 NODE_44344_length_448_cov_3.159806_g36614_i0reverse_frame_1 - 0.016 15.5 1.2 0.019 15.3 0.1 1.7 2 0 0 2 2 2 0 Oligonucleotide/oligosaccharide-binding (OB)-fold MDFI PF15316.6 NODE_44340_length_448_cov_5.435835_g36610_i0reverse_frame_1 - 0.029 14.5 1.6 0.042 14.0 1.6 1.2 1 0 0 1 1 1 0 MyoD family inhibitor Hydin_ADK PF17213.3 NODE_44340_length_448_cov_5.435835_g36610_i0reverse_frame_1 - 0.23 11.7 1.7 0.27 11.5 1.7 1.1 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain DUF3644 PF12358.8 NODE_44340_length_448_cov_5.435835_g36610_i0reverse_frame_1 - 3.7 8.1 6.3 5 7.7 1.2 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3644) Campylo_MOMP PF05538.11 NODE_44334_length_448_cov_79.184019_g36604_i0reverse_frame_1 - 0.19 10.7 0.1 0.24 10.3 0.1 1.1 1 0 0 1 1 1 0 Campylobacter major outer membrane protein THRAP3_BCLAF1 PF15440.6 NODE_44334_length_448_cov_79.184019_g36604_i0forward_frame_1 - 0.17 10.9 1.3 0.17 10.8 1.3 1.0 1 0 0 1 1 1 0 THRAP3/BCLAF1 family DUF3697 PF12478.8 NODE_44333_length_448_cov_83.535109_g36603_i0reverse_frame_1 - 0.076 13.1 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin-associated protein 2 mTERF PF02536.14 NODE_44327_length_448_cov_93.726392_g36597_i0forward_frame_1 - 4.8e-13 48.7 0.0 5.5e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 mTERF ATP_Ca_trans_C PF12424.8 NODE_44327_length_448_cov_93.726392_g36597_i0forward_frame_1 - 0.071 13.6 0.1 5.8 7.5 0.0 2.5 2 0 0 2 2 2 0 Plasma membrane calcium transporter ATPase C terminal Pox_I5 PF04713.12 NODE_44326_length_448_cov_94.215496_g36596_i0reverse_frame_1 - 0.02 14.9 0.7 0.036 14.1 0.7 1.4 1 0 0 1 1 1 0 Poxvirus protein I5 TMEM240 PF15207.6 NODE_44322_length_448_cov_103.283293_g36592_i0forward_frame_1 - 0.029 14.1 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 TMEM240 family TAP35_44 PF07265.11 NODE_44316_length_448_cov_176.309927_g36586_i0forward_frame_1 - 0.025 14.6 1.1 0.025 14.6 1.1 1.5 2 0 0 2 2 2 0 Tapetum specific protein TAP35/TAP44 UL45 PF05473.12 NODE_44315_length_448_cov_178.389831_g36585_i0reverse_frame_1 - 0.54 9.9 3.4 0.38 10.4 0.5 1.9 1 1 0 2 2 2 0 UL45 protein, carbohydrate-binding C-type lectin-like HSCB_C PF07743.13 NODE_44315_length_448_cov_178.389831_g36585_i0forward_frame_1 - 1.5e-15 57.4 9.9 1.5e-15 57.4 9.9 1.5 2 0 0 2 2 2 1 HSCB C-terminal oligomerisation domain CARD_2 PF16739.5 NODE_44315_length_448_cov_178.389831_g36585_i0forward_frame_1 - 0.051 13.6 0.7 0.12 12.4 0.7 1.7 1 1 0 1 1 1 0 Caspase recruitment domain DUF3636 PF12331.8 NODE_44315_length_448_cov_178.389831_g36585_i0forward_frame_1 - 0.1 12.4 0.6 0.15 11.9 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3636) DUF1090 PF06476.12 NODE_44315_length_448_cov_178.389831_g36585_i0forward_frame_1 - 0.45 10.6 7.1 0.16 12.1 4.1 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1090) MORN PF02493.20 NODE_44312_length_448_cov_187.937046_g36582_i0forward_frame_1 - 2.6e-25 86.7 38.9 2.2e-06 27.2 1.9 6.3 6 0 0 6 6 6 6 MORN repeat DAD PF02109.16 NODE_44305_length_448_cov_531.205811_g36576_i0reverse_frame_1 - 0.0093 16.3 4.0 0.016 15.5 4.0 1.4 1 0 0 1 1 1 1 DAD family TRP PF06011.12 NODE_44305_length_448_cov_531.205811_g36576_i0reverse_frame_1 - 0.02 13.7 8.6 0.024 13.4 8.6 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel ER_lumen_recept PF00810.18 NODE_44305_length_448_cov_531.205811_g36576_i0reverse_frame_1 - 2.6 8.9 13.6 2.9 8.7 12.4 1.5 1 1 1 2 2 2 0 ER lumen protein retaining receptor DUF3566 PF12089.8 NODE_44305_length_448_cov_531.205811_g36576_i0reverse_frame_1 - 3.5 8.0 9.6 3.3 8.1 7.7 1.7 1 1 1 2 2 2 0 Transmembrane domain of unknown function (DUF3566) Corona_NS8 PF12093.8 NODE_44304_length_448_cov_600.423729_g3537_i3reverse_frame_1 - 0.35 11.5 2.9 0.42 11.2 0.3 2.0 2 0 0 2 2 2 0 Coronavirus NS8 protein Pkinase PF00069.25 NODE_44293_length_449_cov_2.591787_g36567_i0reverse_frame_1 - 2.6e-24 86.0 4.5 2.8e-24 85.9 4.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_44293_length_449_cov_2.591787_g36567_i0reverse_frame_1 - 2.3e-12 46.8 1.7 2.6e-12 46.6 1.7 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 NODE_44293_length_449_cov_2.591787_g36567_i0reverse_frame_1 - 8.9e-06 25.8 0.2 0.00021 21.3 0.2 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 NODE_44293_length_449_cov_2.591787_g36567_i0reverse_frame_1 - 2e-05 24.0 0.4 2.8e-05 23.6 0.4 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 NODE_44293_length_449_cov_2.591787_g36567_i0reverse_frame_1 - 0.00074 19.2 1.3 0.00083 19.0 1.3 1.1 1 0 0 1 1 1 1 RIO1 family Choline_kinase PF01633.20 NODE_44293_length_449_cov_2.591787_g36567_i0reverse_frame_1 - 0.0074 15.9 1.4 0.01 15.4 1.4 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase DUF2672 PF10878.8 NODE_44293_length_449_cov_2.591787_g36567_i0reverse_frame_1 - 0.04 13.9 2.2 7.6 6.6 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2672) DUF4462 PF14692.6 NODE_44289_length_449_cov_3.057971_g36563_i0forward_frame_1 - 0.0046 16.4 0.1 0.0095 15.4 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4462) DUF3522 PF12036.8 NODE_44286_length_449_cov_3.079710_g36560_i0reverse_frame_1 - 0.047 14.0 0.5 0.067 13.5 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3522) NifW PF03206.14 NODE_44281_length_449_cov_58.260870_g36555_i0reverse_frame_1 - 0.048 14.2 0.2 0.085 13.4 0.2 1.4 1 0 0 1 1 1 0 Nitrogen fixation protein NifW DnaJ PF00226.31 NODE_44278_length_449_cov_63.896135_g36552_i0reverse_frame_1 - 2.4e-17 62.8 0.0 4.9e-17 61.8 0.0 1.5 1 0 0 1 1 1 1 DnaJ domain RCC1_2 PF13540.6 NODE_44270_length_449_cov_95.297101_g36544_i0reverse_frame_1 - 3.4e-08 33.1 2.4 0.0013 18.5 0.4 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF5445 PF17520.2 NODE_44268_length_449_cov_101.468599_g36542_i0reverse_frame_1 - 0.02 14.7 0.4 0.066 13.1 0.4 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5445) Xin PF08043.12 NODE_44258_length_449_cov_165.132850_g36533_i0forward_frame_1 - 0.081 12.6 1.5 0.21 11.2 1.5 1.8 1 0 0 1 1 1 0 Xin repeat MFS_1 PF07690.16 NODE_44257_length_449_cov_167.756039_g36532_i0forward_frame_1 - 1.6e-08 33.9 4.5 2.1e-08 33.5 4.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Collagen PF01391.18 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_1 - 6.3e-05 22.7 22.6 0.0066 16.2 10.3 2.2 1 1 1 2 2 2 2 Collagen triple helix repeat (20 copies) Osteopontin PF00865.18 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_1 - 0.13 11.8 10.1 2.2 7.7 0.2 2.1 2 0 0 2 2 2 0 Osteopontin Nop14 PF04147.12 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_1 - 0.85 7.8 7.0 0.83 7.8 7.0 1.0 1 0 0 1 1 1 0 Nop14-like family Zip PF02535.22 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_1 - 3.8 6.6 4.1 4.5 6.4 4.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter CDC45 PF02724.14 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_1 - 8.2 4.6 6.2 8.4 4.6 6.2 1.1 1 0 0 1 1 1 0 CDC45-like protein ATP_bind_3 PF01171.20 NODE_44231_length_450_cov_2.696386_g36509_i0forward_frame_1 - 0.094 12.5 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 PP-loop family DUF4674 PF15719.5 NODE_44221_length_450_cov_35.587952_g36500_i0forward_frame_1 - 1.3 9.0 4.2 1.8 8.5 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4674) DUF5560 PF17715.1 NODE_44215_length_450_cov_75.790361_g36494_i0reverse_frame_1 - 0.11 12.0 5.3 0.11 11.9 5.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5560) Histone_H2A_C PF16211.5 NODE_44200_length_450_cov_118.872289_g36479_i0reverse_frame_1 - 0.48 10.2 2.3 0.83 9.4 2.3 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A Ribosomal_S9 PF00380.19 NODE_44196_length_450_cov_180.207229_g36475_i0reverse_frame_1 - 1.6e-24 86.7 0.0 1.8e-24 86.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S9/S16 PARG_cat PF05028.14 NODE_44194_length_450_cov_269.491566_g36473_i0reverse_frame_1 - 0.065 12.5 0.1 0.068 12.4 0.1 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) SecIII_SopE_N PF05364.14 NODE_44191_length_450_cov_294.624096_g36470_i0forward_frame_1 - 1.4 9.0 7.6 4.5 7.4 0.3 2.5 2 1 0 2 2 2 0 Salmonella type III secretion SopE effector N-terminus Prok-RING_4 PF14447.6 NODE_44183_length_450_cov_3029.604819_g36464_i0reverse_frame_1 - 0.071 13.0 4.4 0.18 11.7 4.4 1.7 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 Pet191_N PF10203.9 NODE_44177_length_451_cov_1.536058_g36460_i0reverse_frame_3 - 0.24 11.7 6.0 0.69 10.3 1.8 2.6 3 0 0 3 3 3 0 Cytochrome c oxidase assembly protein PET191 Xan_ur_permease PF00860.20 NODE_44173_length_451_cov_2.242788_g36456_i0forward_frame_3 - 1.1e-39 136.2 11.0 1.2e-39 136.1 11.0 1.0 1 0 0 1 1 1 1 Permease family Med25_VWA PF11265.8 NODE_44171_length_451_cov_2.531250_g36454_i0reverse_frame_3 - 0.029 14.2 0.1 0.04 13.7 0.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 25 von Willebrand factor type A OapA_N PF08525.11 NODE_44171_length_451_cov_2.531250_g36454_i0reverse_frame_2 - 1e-08 34.9 2.5 1.4e-08 34.4 2.5 1.2 1 0 0 1 1 1 1 Opacity-associated protein A N-terminal motif OapA PF04225.12 NODE_44171_length_451_cov_2.531250_g36454_i0reverse_frame_2 - 0.00052 20.1 0.0 0.00078 19.5 0.0 1.3 1 0 0 1 1 1 1 Opacity-associated protein A LysM-like domain DUF4870 PF09685.10 NODE_44171_length_451_cov_2.531250_g36454_i0forward_frame_3 - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4870) TRIC PF05197.13 NODE_44170_length_451_cov_2.550481_g36453_i0reverse_frame_3 - 0.078 12.5 0.0 0.12 11.9 0.0 1.4 1 1 0 1 1 1 0 TRIC channel Tubulin PF00091.25 NODE_44163_length_451_cov_2.913462_g36446_i0forward_frame_3 - 3.8e-10 40.3 0.0 4.9e-10 39.9 0.0 1.1 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FAP PF07174.11 NODE_44159_length_451_cov_3.024038_g36442_i0forward_frame_3 - 0.65 9.4 9.8 0.73 9.2 9.8 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) YopE_N PF09020.10 NODE_44155_length_451_cov_4.322115_g36438_i0forward_frame_2 - 0.017 15.4 0.0 0.025 14.8 0.0 1.3 1 0 0 1 1 1 0 YopE, N terminal ATG16 PF08614.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 8e-05 23.0 11.7 0.00012 22.4 11.7 1.3 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) NPV_P10 PF05531.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.00025 21.5 1.9 0.00025 21.5 1.9 2.3 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein FlxA PF14282.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.0028 17.6 22.3 0.31 11.1 22.3 2.2 1 1 0 1 1 1 1 FlxA-like protein DUF1515 PF07439.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.01 15.9 0.6 0.01 15.9 0.6 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF1515) HAUS6_N PF14661.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.012 15.2 7.0 0.016 14.8 7.0 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus AAA_13 PF13166.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.016 13.9 11.0 0.02 13.6 11.0 1.2 1 0 0 1 1 1 0 AAA domain CENP-F_leu_zip PF10473.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.023 14.7 18.7 0.68 10.0 18.7 2.1 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SlyX PF04102.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.025 15.2 11.1 0.059 14.0 7.6 2.2 2 0 0 2 2 2 0 SlyX Syntaxin-6_N PF09177.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.043 14.4 8.6 0.095 13.3 8.6 1.6 1 1 0 1 1 1 0 Syntaxin 6, N-terminal V_ATPase_I PF01496.19 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.055 11.4 11.2 0.066 11.1 11.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3450 PF11932.8 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.062 12.6 11.3 0.07 12.4 10.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Noelin-1 PF12308.8 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.07 13.1 8.0 0.038 14.0 4.2 2.0 1 1 1 2 2 2 0 Neurogenesis glycoprotein HAUS-augmin3 PF14932.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.086 12.4 8.5 0.11 12.1 8.5 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 TPR_MLP1_2 PF07926.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.093 12.8 15.6 0.047 13.8 4.9 2.1 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.1 12.0 9.0 0.13 11.6 9.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HTH_25 PF13413.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.12 12.3 1.4 0.27 11.1 1.4 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain CENP-F_N PF10481.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.14 11.8 15.0 0.049 13.3 11.9 1.7 1 1 0 1 1 1 0 Cenp-F N-terminal domain KLRAQ PF10205.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.14 12.4 16.3 0.14 12.4 2.8 3.0 1 1 2 3 3 3 0 Predicted coiled-coil domain-containing protein bZIP_2 PF07716.15 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.17 12.0 15.3 1.3 9.2 0.8 3.3 2 1 1 3 3 3 0 Basic region leucine zipper Golgin_A5 PF09787.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.28 10.6 15.9 0.63 9.5 15.9 1.5 1 1 0 1 1 1 0 Golgin subfamily A member 5 Cep57_CLD_2 PF14197.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.32 11.1 12.6 0.16 12.0 6.7 2.3 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 DUF489 PF04356.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.37 10.8 4.2 0.61 10.1 4.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF489) LPP PF04728.13 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.38 11.2 14.9 1.2 9.6 0.3 3.4 1 1 0 2 2 2 0 Lipoprotein leucine-zipper Nas2_N PF18265.1 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.42 10.6 9.4 2.5 8.1 0.1 3.5 1 1 2 3 3 3 0 Nas2 N_terminal domain CENP-Q PF13094.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.49 10.6 9.9 2.6 8.2 6.1 2.1 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Lectin_N PF03954.14 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.51 10.1 7.3 0.36 10.6 2.1 2.1 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Cytochrom_B562 PF07361.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.56 10.9 10.9 1.4 9.6 9.1 2.1 1 1 1 2 2 2 0 Cytochrome b562 GvpL_GvpF PF06386.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.58 10.0 4.0 0.81 9.6 4.0 1.2 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF DUF4140 PF13600.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.64 10.5 13.0 5.8 7.4 1.8 3.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Lebercilin PF15619.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.71 9.5 18.7 1.2 8.8 11.3 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease FlaC_arch PF05377.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.73 10.3 16.9 0.54 10.7 1.1 3.5 2 1 2 4 4 4 0 Flagella accessory protein C (FlaC) DUF948 PF06103.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.8 10.0 5.2 5.7 7.3 0.6 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Cob_adeno_trans PF01923.18 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.83 9.8 4.6 2 8.5 4.5 1.6 1 1 0 1 1 1 0 Cobalamin adenosyltransferase DivIC PF04977.15 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.88 9.4 21.4 1.4 8.7 3.2 3.1 1 1 2 3 3 3 0 Septum formation initiator BRE1 PF08647.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 0.93 9.6 20.3 0.55 10.3 13.2 2.3 1 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase Rho_Binding PF08912.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.1 10.2 19.4 3.2 8.7 6.3 3.0 1 1 2 3 3 3 0 Rho Binding DUF4695 PF15766.5 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.2 9.4 7.5 0.3 11.3 2.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4695) Allexi_40kDa PF05549.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.2 8.6 9.1 0.92 9.0 6.4 1.7 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF16 PF01519.16 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.4 9.5 17.5 50 4.5 17.5 2.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 FapA PF03961.13 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.6 7.3 17.4 2.9 6.4 17.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A BLOC1_2 PF10046.9 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.6 9.1 16.4 1.7 9.0 6.6 2.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Spc24 PF08286.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.8 8.9 15.4 5.1 7.4 10.7 2.8 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 GrpE PF01025.19 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.8 8.2 18.4 1.5 8.5 4.6 2.7 1 1 1 2 2 2 0 GrpE Phage_GP20 PF06810.11 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 1.9 8.3 20.3 0.52 10.1 11.8 2.1 1 1 1 2 2 2 0 Phage minor structural protein GP20 APG6_N PF17675.1 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2 9.0 16.8 4.8 7.7 16.4 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region Tropomyosin_1 PF12718.7 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2 8.5 21.4 3.4 7.8 14.3 2.3 1 1 1 2 2 2 0 Tropomyosin like Csm1_N PF18504.1 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2.1 8.8 18.2 4 7.9 0.6 3.2 1 1 2 3 3 3 0 Csm1 N-terminal domain Baculo_PEP_C PF04513.12 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2.3 8.3 6.7 1.3 9.1 2.4 1.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus ALMT PF11744.8 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2.7 6.7 9.7 3 6.6 9.7 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter MetOD2 PF18548.1 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 2.9 8.0 13.4 3.2 7.9 2.2 2.6 1 1 1 2 2 2 0 Metanogen output domain 2 DUF4200 PF13863.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 3.1 8.2 22.8 24 5.3 6.7 3.1 1 1 1 3 3 3 0 Domain of unknown function (DUF4200) Gon7 PF08738.10 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 3.1 7.9 9.7 1.7 8.7 0.1 2.6 1 1 1 2 2 2 0 Gon7 family TMPIT PF07851.13 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 3.5 6.8 15.1 0.95 8.7 10.4 1.8 1 1 1 2 2 2 0 TMPIT-like protein CCDC-167 PF15188.6 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 4.1 7.8 17.9 0.56 10.6 5.5 2.2 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF724 PF05266.14 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 5.1 6.9 17.2 2.8 7.7 4.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Prefoldin PF02996.17 NODE_44136_length_451_cov_98.000000_g36419_i0reverse_frame_3 - 5.3 7.0 18.7 1.7 8.6 3.1 3.0 1 1 2 3 3 3 0 Prefoldin subunit Baculo_11_kDa PF06143.11 NODE_44134_length_451_cov_107.492788_g36417_i0reverse_frame_2 - 0.35 10.5 3.9 0.16 11.5 1.0 2.0 2 1 0 2 2 2 0 Baculovirus 11 kDa family DUF1635 PF07795.11 NODE_44127_length_451_cov_168.867788_g36410_i0forward_frame_2 - 0.021 14.7 1.0 0.026 14.4 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) DUF5622 PF18533.1 NODE_44123_length_451_cov_213.713942_g36407_i0reverse_frame_3 - 0.12 12.5 0.1 0.19 11.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5622) NAD_binding_7 PF13241.6 NODE_44123_length_451_cov_213.713942_g36407_i0reverse_frame_3 - 0.19 12.2 0.0 0.25 11.8 0.0 1.2 1 0 0 1 1 1 0 Putative NAD(P)-binding Ribosomal_L4 PF00573.22 NODE_44123_length_451_cov_213.713942_g36407_i0reverse_frame_2 - 0.42 10.3 2.9 0.56 9.9 2.9 1.1 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family Sigma_reg_N PF13800.6 NODE_44107_length_452_cov_1.424460_g36392_i0reverse_frame_2 - 8.1 6.8 8.4 6.5 7.1 3.3 2.2 2 0 0 2 2 2 0 Sigma factor regulator N-terminal PI3_PI4_kinase PF00454.27 NODE_44107_length_452_cov_1.424460_g36392_i0forward_frame_2 - 2.6e-20 73.3 0.7 6.5e-15 55.6 0.1 2.1 1 1 1 2 2 2 2 Phosphatidylinositol 3- and 4-kinase Coagulase PF08764.10 NODE_44107_length_452_cov_1.424460_g36392_i0forward_frame_2 - 0.023 14.9 0.5 0.028 14.6 0.5 1.0 1 0 0 1 1 1 0 Staphylococcus aureus coagulase Spuma_A9PTase PF03539.14 NODE_44105_length_452_cov_1.822542_g36390_i0reverse_frame_2 - 0.012 15.7 0.1 0.014 15.5 0.1 1.3 1 0 0 1 1 1 0 Spumavirus aspartic protease (A9) nsp7 PF08716.10 NODE_44105_length_452_cov_1.822542_g36390_i0forward_frame_3 - 0.0086 16.7 0.4 0.021 15.4 0.4 1.6 1 0 0 1 1 1 1 nsp7 replicase PhzC-PhzF PF02567.16 NODE_44104_length_452_cov_1.832134_g36389_i0reverse_frame_3 - 1.5e-46 159.1 0.0 1.7e-46 159.0 0.0 1.0 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein HupH_C PF04809.13 NODE_44104_length_452_cov_1.832134_g36389_i0reverse_frame_3 - 0.14 11.9 0.0 5.8 6.7 0.0 2.1 2 0 0 2 2 2 0 HupH hydrogenase expression protein, C-terminal conserved region Rhodopsin_N PF10413.9 NODE_44099_length_452_cov_2.330935_g36384_i0reverse_frame_3 - 0.068 13.0 0.0 0.42 10.5 0.1 2.0 2 0 0 2 2 2 0 Amino terminal of the G-protein receptor rhodopsin DUF3010 PF11215.8 NODE_44099_length_452_cov_2.330935_g36384_i0forward_frame_3 - 0.028 14.7 0.2 0.045 14.1 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3010) DUF5539 PF17693.1 NODE_44086_length_452_cov_34.908873_g36371_i0reverse_frame_3 - 0.22 11.1 4.3 0.3 10.7 4.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5539) RNA_pol_Rpc4 PF05132.14 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 0.0096 16.4 5.1 0.01 16.3 5.1 1.1 1 0 0 1 1 1 1 RNA polymerase III RPC4 FAM176 PF14851.6 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 0.13 11.9 4.5 0.2 11.3 4.5 1.2 1 0 0 1 1 1 0 FAM176 family CLN3 PF02487.17 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 0.43 9.6 1.1 0.49 9.4 1.1 1.1 1 0 0 1 1 1 0 CLN3 protein Connexin PF00029.19 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 1.8 8.3 11.7 2.3 7.9 11.7 1.2 1 0 0 1 1 1 0 Connexin RNA_polI_A34 PF08208.11 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 2.9 7.9 25.8 4.1 7.4 25.8 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 TFIIF_alpha PF05793.12 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 4.9 5.6 26.2 6.2 5.3 26.2 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Spt20 PF12090.8 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_3 - 5.1 6.6 12.4 6.8 6.2 12.4 1.1 1 0 0 1 1 1 0 Spt20 family DUF2828 PF11443.8 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_2 - 0.044 11.9 6.3 0.049 11.7 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) V_ATPase_I PF01496.19 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_2 - 0.049 11.6 1.5 0.058 11.3 1.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Presenilin PF01080.17 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_2 - 0.77 8.5 2.1 0.81 8.4 2.1 1.1 1 0 0 1 1 1 0 Presenilin Coilin_N PF15862.5 NODE_44085_length_452_cov_47.863309_g36370_i0reverse_frame_2 - 8.5 6.2 16.9 14 5.5 16.9 1.2 1 0 0 1 1 1 0 Coilin N-terminus GRP PF07172.11 NODE_44084_length_452_cov_48.112710_g36369_i0reverse_frame_3 - 5.3 7.8 13.0 1.9 9.2 5.9 2.2 2 0 0 2 2 2 0 Glycine rich protein family Hamartin PF04388.12 NODE_44084_length_452_cov_48.112710_g36369_i0reverse_frame_2 - 2.6 6.6 11.7 3 6.4 11.7 1.2 1 0 0 1 1 1 0 Hamartin protein DUF4064 PF13273.6 NODE_44083_length_452_cov_56.848921_g36368_i0reverse_frame_2 - 0.0037 17.5 0.1 0.0052 17.0 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) P22_AR_C PF10548.9 NODE_44080_length_452_cov_61.402878_g36365_i0forward_frame_3 - 0.012 15.8 1.3 2.2 8.5 0.0 3.3 4 0 0 4 4 4 0 P22AR C-terminal domain zf-RING_UBOX PF13445.6 NODE_44078_length_452_cov_63.597122_g36363_i0forward_frame_3 - 0.0097 15.9 0.6 0.0097 15.9 0.6 2.2 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_44078_length_452_cov_63.597122_g36363_i0forward_frame_3 - 0.034 14.0 1.3 0.19 11.6 0.3 2.6 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF3425 PF11905.8 NODE_44070_length_452_cov_102.347722_g36355_i0reverse_frame_2 - 0.062 13.3 0.1 0.092 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) UPF0767 PF15990.5 NODE_44069_length_452_cov_108.539568_g36354_i0forward_frame_2 - 2.8 8.1 6.7 6.8 6.9 0.3 2.3 2 0 0 2 2 2 0 UPF0767 family Afaf PF15339.6 NODE_44063_length_452_cov_140.055156_g36348_i0reverse_frame_2 - 0.0038 17.0 1.8 0.0051 16.6 1.8 1.2 1 0 0 1 1 1 1 Acrosome formation-associated factor HALZ PF02183.18 NODE_44063_length_452_cov_140.055156_g36348_i0reverse_frame_2 - 0.015 15.5 2.0 0.026 14.7 2.0 1.4 1 0 0 1 1 1 0 Homeobox associated leucine zipper YabA PF06156.13 NODE_44063_length_452_cov_140.055156_g36348_i0reverse_frame_2 - 0.018 15.7 0.7 0.032 14.9 0.7 1.4 1 0 0 1 1 1 0 Initiation control protein YabA DivIC PF04977.15 NODE_44063_length_452_cov_140.055156_g36348_i0reverse_frame_2 - 0.043 13.6 0.4 0.043 13.6 0.4 1.8 2 0 0 2 2 2 0 Septum formation initiator Cnn_1N PF07989.11 NODE_44063_length_452_cov_140.055156_g36348_i0reverse_frame_2 - 0.054 13.6 3.2 0.12 12.5 3.2 1.8 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 fn3_4 PF16794.5 NODE_44063_length_452_cov_140.055156_g36348_i0reverse_frame_2 - 0.11 12.4 0.2 1.6 8.7 0.1 2.2 2 0 0 2 2 2 0 Fibronectin-III type domain EVC2_like PF12297.8 NODE_44061_length_452_cov_149.431655_g36346_i0reverse_frame_3 - 0.031 13.0 6.2 0.038 12.7 6.2 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Presenilin PF01080.17 NODE_44061_length_452_cov_149.431655_g36346_i0reverse_frame_2 - 3.6 6.3 4.1 4.1 6.1 4.1 1.1 1 0 0 1 1 1 0 Presenilin IGFL PF14653.6 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_3 - 0.77 9.8 12.6 1.3 9.1 1.0 2.5 2 1 1 3 3 3 0 Insulin growth factor-like family DUF3626 PF12294.8 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_3 - 1.1 8.2 4.9 9 5.3 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3626) ATP_Ca_trans_C PF12424.8 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_3 - 9.8 6.7 7.6 29 5.2 0.8 2.4 2 0 0 2 2 2 0 Plasma membrane calcium transporter ATPase C terminal SP_C-Propep PF08999.10 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_2 - 0.24 11.2 3.3 1.5 8.6 0.5 2.7 3 0 0 3 3 3 0 Surfactant protein C, N terminal propeptide FERM_M PF00373.18 NODE_44056_length_452_cov_398.978417_g36341_i0reverse_frame_2 - 2.9 8.3 4.4 24 5.3 0.6 2.1 1 1 1 2 2 2 0 FERM central domain BTAD PF03704.17 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 0.08 13.4 7.3 1.9 8.9 1.4 2.1 1 1 1 2 2 2 0 Bacterial transcriptional activator domain DUF29 PF01724.16 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 0.15 12.2 1.2 9.6 6.4 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function DUF29 AC_N PF16214.5 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 2.1 7.4 14.7 4.1 6.4 11.6 1.9 1 1 1 2 2 2 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF3018 PF11455.8 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 3.3 7.7 13.3 9.5 6.2 1.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3018) GIT_SHD PF08518.11 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_3 - 6.5 6.5 7.9 20 4.9 1.0 2.4 2 0 0 2 2 2 0 Spa2 homology domain (SHD) of GIT BORCS7 PF16088.5 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.00087 19.5 1.2 1 9.7 0.1 2.2 2 0 0 2 2 2 2 BLOC-1-related complex sub-unit 7 SRCR PF00530.18 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.0012 19.2 4.8 0.49 10.9 0.5 2.2 1 1 1 2 2 2 2 Scavenger receptor cysteine-rich domain FUSC PF04632.12 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.0063 15.1 3.6 0.006 15.2 3.6 1.1 1 0 0 1 1 1 1 Fusaric acid resistance protein family bZIP_1 PF00170.21 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.0094 16.0 5.5 0.59 10.3 0.4 2.8 2 1 0 3 3 3 2 bZIP transcription factor GAS PF13851.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.021 14.1 10.2 0.4 10.0 5.4 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding ADAM_CR_2 PF17771.1 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.027 15.0 2.4 3.6 8.2 0.1 2.2 2 0 0 2 2 2 0 ADAM cysteine-rich domain Rootletin PF15035.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.028 14.4 10.3 0.84 9.6 6.2 2.3 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion Ubiquitin_5 PF18037.1 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.031 14.6 1.8 6.3 7.2 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-like domain DUF4472 PF14739.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.044 14.5 11.3 0.15 12.8 3.2 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4472) BRCT_3 PF18428.1 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.085 12.9 1.1 12 6.1 0.1 2.1 1 1 1 2 2 2 0 BRCA1 C Terminus (BRCT) domain F_actin_bind PF08919.10 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.11 12.6 9.2 0.78 9.9 6.5 2.1 1 1 1 2 2 2 0 F-actin binding Fez1 PF06818.15 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.15 12.5 13.1 0.3 11.5 13.1 1.5 1 1 0 1 1 1 0 Fez1 Spc24 PF08286.11 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.2 11.9 11.5 0.6 10.4 4.0 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 TSC22 PF01166.18 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.21 11.9 3.8 16 5.9 0.3 3.2 1 1 0 2 2 2 0 TSC-22/dip/bun family YabA PF06156.13 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.23 12.1 6.5 2.2 8.9 2.3 2.2 1 1 1 2 2 2 0 Initiation control protein YabA DUF1640 PF07798.11 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.24 11.4 4.6 4 7.4 3.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) Golgin_A5 PF09787.9 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.32 10.4 11.0 0.41 10.1 11.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 AATF-Che1 PF13339.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.39 11.4 9.8 6.2 7.5 5.4 2.1 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor NCA2 PF08637.10 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.55 9.4 2.5 0.68 9.0 2.5 1.2 1 0 0 1 1 1 0 ATP synthase regulation protein NCA2 GrpE PF01025.19 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.57 9.8 7.5 1.9 8.1 2.3 2.2 1 1 1 2 2 2 0 GrpE ABC_tran_CTD PF16326.5 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.8 10.0 12.0 4.4 7.6 2.5 2.2 1 1 1 2 2 2 0 ABC transporter C-terminal domain AAA_lid_9 PF17871.1 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 0.81 9.6 8.8 4.6 7.2 1.3 2.1 2 0 0 2 2 2 0 AAA lid domain ADIP PF11559.8 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 1 9.5 9.9 5.2 7.1 4.7 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DUF2615 PF11027.8 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 1.6 8.9 5.1 16 5.7 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2615) SlyX PF04102.12 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 1.8 9.3 6.3 4.6 7.9 1.0 2.6 1 1 2 3 3 3 0 SlyX Phage_GPO PF05929.11 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 2.1 7.9 7.7 6.6 6.3 7.7 1.8 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Uso1_p115_C PF04871.13 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 2.1 8.7 18.5 2.3e+02 2.1 18.5 2.3 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF3584 PF12128.8 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 2.1 5.7 14.5 2.3 5.6 14.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_11 PF13086.6 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 2.9 7.6 10.5 8.5 6.1 10.5 1.6 1 1 0 1 1 1 0 AAA domain Paralemmin PF03285.15 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 3.1 7.3 12.6 4.7 6.7 3.2 2.0 1 1 1 2 2 2 0 Paralemmin DivIC PF04977.15 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 4.6 7.1 6.7 3.9 7.3 0.4 2.6 2 1 1 3 3 3 0 Septum formation initiator WXG100 PF06013.12 NODE_44056_length_452_cov_398.978417_g36341_i0forward_frame_2 - 8.2 6.7 11.1 3.5 7.9 0.6 2.9 2 1 1 3 3 3 0 Proteins of 100 residues with WXG # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks169.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks169.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks169.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks169.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HEAT PF02985.22 ORF100601 - 0.11 12.8 0.1 4.4 7.8 0.0 2.9 2 0 0 2 2 2 0 HEAT repeat TTL PF03133.15 ORF99621 - 2.2e-17 63.1 0.0 1.2e-09 37.7 0.0 2.3 1 1 1 2 2 2 2 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF99621 - 0.0025 17.1 0.0 0.0044 16.3 0.0 1.4 1 0 0 1 1 1 1 YheC/D like ATP-grasp zf-CCHC_4 PF14392.6 ORF99621 - 0.81 9.5 2.6 3.4 7.5 2.0 2.1 2 0 0 2 2 2 0 Zinc knuckle TPR_19 PF14559.6 ORF78530 - 4e-14 52.9 3.4 0.021 15.3 0.0 6.7 6 1 1 7 7 7 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF78530 - 1.1e-11 44.8 36.0 0.00014 22.0 6.6 5.7 4 1 1 6 6 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 ORF78530 - 3e-06 26.9 26.0 0.4 10.9 0.0 8.4 10 0 0 10 10 9 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF78530 - 6.1e-05 23.6 0.2 0.32 11.7 0.0 4.0 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF78530 - 0.00023 21.7 0.4 10 7.2 0.0 5.6 7 0 0 7 7 6 1 Tetratricopeptide repeat PPR_2 PF13041.6 ORF78530 - 0.001 19.2 3.5 0.46 10.7 0.0 4.3 4 0 0 4 4 4 1 PPR repeat family TPR_7 PF13176.6 ORF78530 - 0.0014 18.5 3.3 0.91 9.7 0.1 4.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF78530 - 0.0025 18.3 7.8 0.29 11.9 0.0 5.8 7 0 0 7 7 6 1 Tetratricopeptide repeat PPR PF01535.20 ORF78530 - 0.012 15.8 5.4 25 5.4 0.1 5.3 5 0 0 5 5 5 0 PPR repeat DUF3768 PF12599.8 ORF78530 - 0.14 12.2 0.1 0.61 10.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3768) TPR_1 PF00515.28 ORF78530 - 0.29 11.0 0.0 0.29 11.0 0.0 6.3 8 0 0 8 8 8 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF78530 - 2 8.5 10.4 8.6 6.5 0.1 4.8 5 0 0 5 5 5 0 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 ORF78530 - 3 8.2 12.9 7 7.0 0.2 5.1 4 1 2 6 6 6 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF78530 - 3.8 8.0 14.3 0.59 10.5 0.1 5.0 5 0 0 5 5 4 0 Tetratricopeptide repeat FG-GAP PF01839.23 ORF76438 - 0.0002 21.4 7.2 0.0029 17.7 0.0 3.9 5 0 0 5 5 5 2 FG-GAP repeat VCBS PF13517.6 ORF76438 - 0.0023 18.5 23.0 4.8 7.9 9.8 5.1 3 2 1 4 4 4 4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella Dynein_C PF18199.1 ORF64472 - 0.0073 15.6 0.3 0.0073 15.6 0.3 1.7 2 0 0 2 2 2 1 Dynein heavy chain C-terminal domain PilJ PF13675.6 ORF64472 - 0.11 12.5 8.0 0.24 11.4 0.9 3.5 2 2 0 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term DUF948 PF06103.11 ORF64472 - 0.26 11.6 6.1 0.41 10.9 0.2 3.3 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF3337 PF11816.8 ORF64472 - 0.48 10.3 6.2 0.052 13.4 1.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3337) AlkA_N PF06029.11 ORF64472 - 9.2 6.6 8.4 8 6.8 0.3 3.5 3 0 0 3 3 3 0 AlkA N-terminal domain Pkinase PF00069.25 ORF62314 - 2.1e-57 194.5 0.0 2.8e-57 194.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62314 - 3.6e-36 124.8 0.2 5.1e-36 124.3 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF62314 - 5.1e-12 44.4 0.0 1.2e-06 27.6 0.0 4.0 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF62314 - 5.3e-11 42.8 0.1 3.5e-08 33.8 0.0 3.5 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF62314 - 1.5e-10 40.1 3.1 1.4e-06 27.7 0.0 4.6 5 0 0 5 5 5 2 EF-hand domain EF-hand_5 PF13202.6 ORF62314 - 4.9e-08 32.1 0.5 1.8e-07 30.4 0.1 2.3 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF62314 - 4.1e-07 29.7 0.4 0.029 14.2 0.1 4.1 3 1 1 4 4 4 2 EF-hand domain pair CaATP_NAI PF12515.8 ORF62314 - 0.0014 18.2 0.2 0.0032 17.0 0.2 1.5 1 0 0 1 1 1 1 Ca2+-ATPase N terminal autoinhibitory domain APH PF01636.23 ORF62314 - 0.0041 17.1 0.1 0.26 11.2 0.0 2.4 1 1 0 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF62314 - 0.0092 14.8 0.0 0.019 13.8 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase Integrase_Zn PF02022.19 ORF62314 - 0.081 12.9 0.3 0.21 11.6 0.0 1.9 2 0 0 2 2 2 0 Integrase Zinc binding domain Cpn60_TCP1 PF00118.24 ORF42396 - 6.3e-154 513.2 8.6 7.2e-154 513.0 8.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family MscS_porin PF12795.7 ORF42396 - 0.14 11.6 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 Mechanosensitive ion channel porin domain Bombinin PF05298.11 ORF39109 - 0.056 13.1 0.1 5.2 6.7 0.0 2.6 2 0 0 2 2 2 0 Bombinin DsrD PF08679.11 ORF39109 - 9.2 6.6 8.2 43 4.5 0.2 3.8 3 0 0 3 3 3 0 Dissimilatory sulfite reductase D (DsrD) TPR_19 PF14559.6 ORF26116 - 4e-14 52.9 3.4 0.021 15.3 0.0 6.7 6 1 1 7 7 7 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF26116 - 1.1e-11 44.8 36.0 0.00014 22.0 6.6 5.7 4 1 1 6 6 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 ORF26116 - 3e-06 26.9 26.0 0.4 10.9 0.0 8.4 10 0 0 10 10 9 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF26116 - 6.1e-05 23.6 0.2 0.32 11.7 0.0 4.0 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF26116 - 0.00023 21.7 0.4 10 7.2 0.0 5.6 7 0 0 7 7 6 1 Tetratricopeptide repeat PPR_2 PF13041.6 ORF26116 - 0.001 19.2 3.5 0.46 10.7 0.0 4.3 4 0 0 4 4 4 1 PPR repeat family TPR_7 PF13176.6 ORF26116 - 0.0014 18.5 3.3 0.91 9.7 0.1 4.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF26116 - 0.0025 18.3 7.8 0.29 11.9 0.0 5.8 7 0 0 7 7 6 1 Tetratricopeptide repeat PPR PF01535.20 ORF26116 - 0.012 15.8 5.4 25 5.4 0.1 5.3 5 0 0 5 5 5 0 PPR repeat DUF3768 PF12599.8 ORF26116 - 0.14 12.2 0.1 0.61 10.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3768) TPR_1 PF00515.28 ORF26116 - 0.29 11.0 0.0 0.29 11.0 0.0 6.3 8 0 0 8 8 8 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF26116 - 2 8.5 10.4 8.6 6.5 0.1 4.8 5 0 0 5 5 5 0 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 ORF26116 - 3 8.2 12.9 7 7.0 0.2 5.1 4 1 2 6 6 6 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF26116 - 3.8 8.0 14.3 0.59 10.5 0.1 5.0 5 0 0 5 5 4 0 Tetratricopeptide repeat ABC_tran PF00005.27 ORF21408 - 3e-29 102.3 0.0 6.4e-29 101.2 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF21408 - 2.4e-21 76.6 10.9 3.1e-21 76.2 10.9 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF21408 - 3.1e-06 26.8 1.4 0.00022 20.8 0.3 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF21408 - 0.0025 17.9 0.2 0.0062 16.6 0.2 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase MeaB PF03308.16 ORF21408 - 0.021 13.8 0.0 0.036 13.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 ORF21408 - 0.022 14.5 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF21408 - 0.033 13.9 0.0 0.08 12.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 ORF21408 - 0.039 14.5 0.0 0.12 13.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF21408 - 0.04 14.0 0.1 0.091 12.8 0.1 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_23 PF13476.6 ORF21408 - 0.072 13.6 0.1 0.19 12.2 0.1 1.6 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF21408 - 0.12 12.1 0.1 1.2 8.8 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein NTPase_1 PF03266.15 ORF21408 - 0.16 11.9 0.8 0.49 10.3 0.1 2.1 2 0 0 2 2 2 0 NTPase DNA_pol_A_exo1 PF01612.20 ORF144356 - 1.1e-15 57.8 0.0 1.6e-14 54.0 0.0 2.7 2 1 0 2 2 2 1 3'-5' exonuclease WHEP-TRS PF00458.20 ORF144356 - 4e-12 46.1 0.0 1.2e-11 44.6 0.0 1.8 1 0 0 1 1 1 1 WHEP-TRS domain WXG100 PF06013.12 ORF132831 - 0.021 15.1 2.0 4.1 7.7 0.0 3.6 3 1 1 4 4 4 0 Proteins of 100 residues with WXG Apolipoprotein PF01442.18 ORF132831 - 0.088 12.7 0.0 2.2 8.1 0.0 2.6 2 1 1 3 3 3 0 Apolipoprotein A1/A4/E domain MIG-14_Wnt-bd PF06664.12 ORF106201 - 6e-37 127.5 39.1 6e-37 127.5 39.1 1.4 2 0 0 2 2 2 1 Wnt-binding factor required for Wnt secretion DUF2207 PF09972.9 ORF106201 - 2.9 6.5 0.0 2.9 6.5 0.0 3.4 2 1 1 3 3 3 0 Predicted membrane protein (DUF2207) Calpain_inhib PF00748.19 ORF99903 - 0.00057 20.4 9.1 0.35 11.4 0.3 3.3 2 1 1 3 3 3 2 Calpain inhibitor Na_H_Exchanger PF00999.21 ORF94047 - 1.4e-56 192.0 29.7 1.9e-56 191.5 29.7 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF3333 PF11812.8 ORF94047 - 0.018 15.2 0.0 0.059 13.6 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) RRM_1 PF00076.22 ORF79903 - 7.4e-28 96.2 4.6 3.8e-15 55.5 0.7 2.9 2 1 1 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF79903 - 1.4e-07 31.5 0.4 0.00035 20.6 0.1 2.9 2 1 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 ORF79903 - 0.07 13.2 0.2 9.8 6.3 0.0 2.4 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif Peptidase_M16_M PF16187.5 ORF73176 - 9.4e-26 90.7 0.0 1.7e-25 89.9 0.0 1.3 1 0 0 1 1 1 1 Middle or third domain of peptidase_M16 Peptidase_M16_C PF05193.21 ORF73176 - 3.4e-12 46.7 0.0 1.1e-11 45.0 0.0 1.9 2 0 0 2 2 2 1 Peptidase M16 inactive domain Collagen_mid PF15984.5 ORF63963 - 8.1e-05 22.5 17.3 0.0072 16.1 6.2 2.9 1 1 2 3 3 3 3 Bacterial collagen, middle region Spo0A_C PF08769.11 ORF63963 - 0.072 13.2 0.6 0.28 11.3 0.2 2.2 2 0 0 2 2 2 0 Sporulation initiation factor Spo0A C terminal ATP-synt_B PF00430.18 ORF63963 - 0.17 11.9 1.3 0.85 9.7 0.5 2.6 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) FAM176 PF14851.6 ORF63963 - 0.38 10.4 2.9 0.32 10.7 0.2 2.3 2 0 0 2 2 2 0 FAM176 family ARGLU PF15346.6 ORF63963 - 1.9 8.4 9.0 0.19 11.6 2.0 2.6 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 Ion_trans PF00520.31 ORF62775 - 0.0001 21.6 10.9 0.00043 19.6 0.3 3.1 3 1 0 3 3 3 2 Ion transport protein BCD PF15461.6 ORF62775 - 0.018 14.5 5.7 0.045 13.2 5.7 1.6 1 1 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase Calpain_inhib PF00748.19 ORF62654 - 0.00011 22.7 7.0 0.3 11.6 0.2 3.3 2 1 1 3 3 3 2 Calpain inhibitor UCH PF00443.29 ORF59529 - 1.6e-64 217.9 1.3 2.9e-64 217.0 1.3 1.4 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF59529 - 2.4e-19 70.1 0.4 2.4e-19 70.1 0.4 2.7 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase TPR_2 PF07719.17 ORF55971 - 3.1e-14 51.9 6.4 1.1e-05 25.1 0.1 6.0 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF55971 - 2.7e-13 49.1 14.3 9.3e-06 25.3 0.2 6.1 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF55971 - 6.2e-08 32.8 2.6 0.00021 21.5 0.3 4.7 5 2 1 6 6 5 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF55971 - 1.2e-07 31.4 15.1 0.0018 18.3 0.4 6.3 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF55971 - 1e-06 28.3 0.1 0.46 10.6 0.0 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF55971 - 1.2e-06 28.1 0.0 0.0002 21.0 0.0 3.5 3 0 0 3 3 3 1 TPR repeat TPR_19 PF14559.6 ORF55971 - 2.2e-05 24.9 4.0 0.0005 20.5 0.7 4.3 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF55971 - 3.1e-05 24.3 2.5 0.85 10.4 0.0 6.0 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF55971 - 0.00027 21.5 0.0 0.24 12.1 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF55971 - 0.00059 20.0 13.9 0.045 14.0 1.2 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 ORF55971 - 0.0017 18.2 0.1 0.9 9.5 0.0 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF55971 - 0.0021 18.7 0.0 3.7 8.6 0.0 4.0 4 0 0 4 4 3 1 Tetratricopeptide repeat SusD-like_3 PF14322.6 ORF55971 - 0.0055 17.1 4.5 0.0059 17.0 1.2 2.7 2 1 1 3 3 3 1 Starch-binding associating with outer membrane SPO22 PF08631.10 ORF55971 - 0.0083 15.6 0.3 0.0083 15.6 0.3 3.1 3 1 0 3 3 3 1 Meiosis protein SPO22/ZIP4 like LRR_8 PF13855.6 ORF55971 - 0.012 15.4 5.9 1.2 9.0 0.2 3.8 3 0 0 3 3 3 0 Leucine rich repeat BLI1 PF17324.2 ORF55971 - 0.16 12.7 0.0 0.16 12.7 0.0 3.0 4 0 0 4 4 2 0 BLOC-1 interactor 1 TPR_17 PF13431.6 ORF55971 - 0.71 10.4 9.0 31 5.3 0.2 5.0 5 0 0 5 5 4 0 Tetratricopeptide repeat Carboxyl_trans PF01039.22 ORF55129 - 3.7e-137 458.0 0.1 4.6e-137 457.6 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 ORF55129 - 1.6e-05 24.6 0.1 0.018 14.5 0.0 2.2 2 0 0 2 2 2 2 Malonate decarboxylase gamma subunit (MdcE) ECH_1 PF00378.20 ORF55129 - 0.32 10.3 1.3 1.7 7.9 0.0 2.3 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase Calpain_inhib PF00748.19 ORF45385 - 0.00057 20.4 9.1 0.35 11.4 0.3 3.3 2 1 1 3 3 3 2 Calpain inhibitor Pkinase PF00069.25 ORF41491 - 3.1e-75 253.0 0.2 5.4e-75 252.2 0.2 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41491 - 4.1e-46 157.4 0.0 7.6e-46 156.5 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF41491 - 8.3e-12 45.0 0.0 1.3e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF41491 - 6.5e-06 25.3 0.3 1.1e-05 24.5 0.3 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF41491 - 0.00018 20.9 0.2 0.00038 19.9 0.2 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF41491 - 0.11 12.4 0.4 0.54 10.1 0.3 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family GOLD_2 PF13897.6 ORF41491 - 0.17 12.4 0.4 0.82 10.2 0.3 2.1 2 0 0 2 2 2 0 Golgi-dynamics membrane-trafficking GRIP PF01465.20 ORF39515 - 6.9e-08 32.3 0.3 2e-07 30.8 0.3 1.9 1 0 0 1 1 1 1 GRIP domain FAM76 PF16046.5 ORF39515 - 0.0012 18.3 24.3 0.0012 18.3 24.3 4.2 1 1 2 4 4 4 1 FAM76 protein Fzo_mitofusin PF04799.13 ORF39515 - 0.046 13.3 0.5 0.046 13.3 0.5 5.7 5 1 2 7 7 7 0 fzo-like conserved region TolA_bind_tri PF16331.5 ORF39515 - 1.1 9.4 28.9 3 8.0 3.7 4.7 4 1 0 4 4 4 0 TolA binding protein trimerisation PspA_IM30 PF04012.12 ORF39515 - 1.6 8.3 42.4 0.37 10.3 13.0 5.6 3 1 2 6 6 6 0 PspA/IM30 family DUF4407 PF14362.6 ORF39515 - 4.8 6.4 39.0 1.5 8.1 17.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) Ion_trans PF00520.31 ORF33297 - 0.00015 21.0 11.6 0.00043 19.6 0.3 3.1 3 1 0 3 3 3 2 Ion transport protein PARP PF00644.20 ORF28858 - 0.00091 18.9 0.0 0.0016 18.1 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Cpn60_TCP1 PF00118.24 ORF28563 - 2.1e-151 504.9 11.5 2.3e-151 504.8 11.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GlcNAc-1_reg PF18440.1 ORF28563 - 0.093 13.0 2.0 0.72 10.1 0.1 3.0 3 0 0 3 3 3 0 Putative GlcNAc-1 phosphotransferase regulatory domain MA3 PF02847.17 ORF28428 - 3.1e-23 81.9 0.4 9.5e-23 80.3 0.4 1.9 1 0 0 1 1 1 1 MA3 domain MIF4G PF02854.19 ORF28428 - 1.6e-14 54.1 0.4 5e-14 52.4 0.3 2.0 2 0 0 2 2 2 1 MIF4G domain Mo-nitro_C PF06967.11 ORF28428 - 0.1 12.6 0.1 0.24 11.4 0.1 1.6 1 0 0 1 1 1 0 Mo-dependent nitrogenase C-terminus FAM176 PF14851.6 ORF28428 - 0.27 10.9 6.1 1.3 8.7 1.5 2.4 2 0 0 2 2 2 0 FAM176 family DUF445 PF04286.12 ORF28428 - 0.39 10.5 9.4 6.1 6.6 3.2 3.4 1 1 1 2 2 2 0 Protein of unknown function (DUF445) Lin-8 PF03353.15 ORF28428 - 0.57 9.7 6.3 6.5 6.2 3.2 2.5 2 1 0 2 2 2 0 Ras-mediated vulval-induction antagonist Collagen_mid PF15984.5 ORF128981 - 8.1e-05 22.5 17.3 0.0072 16.1 6.2 2.9 1 1 2 3 3 3 3 Bacterial collagen, middle region Spo0A_C PF08769.11 ORF128981 - 0.072 13.2 0.6 0.28 11.3 0.2 2.2 2 0 0 2 2 2 0 Sporulation initiation factor Spo0A C terminal ATP-synt_B PF00430.18 ORF128981 - 0.17 11.9 1.3 0.85 9.7 0.5 2.6 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) FAM176 PF14851.6 ORF128981 - 0.38 10.4 2.9 0.32 10.7 0.2 2.3 2 0 0 2 2 2 0 FAM176 family ARGLU PF15346.6 ORF128981 - 1.9 8.4 9.0 0.19 11.6 2.0 2.6 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 Ligase_CoA PF00549.19 ORF122368 - 2.8e-48 163.6 0.0 8.3e-47 158.8 0.0 2.6 2 0 0 2 2 2 1 CoA-ligase CoA_binding PF02629.19 ORF122368 - 3.5e-16 59.7 0.3 1.1e-14 54.8 0.0 2.7 3 0 0 3 3 3 1 CoA binding domain Succ_CoA_lig PF13607.6 ORF122368 - 0.00021 21.1 0.0 0.00053 19.8 0.0 1.7 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain Isochorismatase PF00857.20 ORF122368 - 0.12 12.6 0.0 5 7.3 0.0 2.7 3 0 0 3 3 3 0 Isochorismatase family Cpn60_TCP1 PF00118.24 ORF11819 - 2.1e-151 504.9 11.5 2.3e-151 504.8 11.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GlcNAc-1_reg PF18440.1 ORF11819 - 0.093 13.0 2.0 0.72 10.1 0.1 3.0 3 0 0 3 3 3 0 Putative GlcNAc-1 phosphotransferase regulatory domain Ligase_CoA PF00549.19 ORF117579 - 2.8e-48 163.6 0.0 8.3e-47 158.8 0.0 2.6 2 0 0 2 2 2 1 CoA-ligase CoA_binding PF02629.19 ORF117579 - 3.5e-16 59.7 0.3 1.1e-14 54.8 0.0 2.7 3 0 0 3 3 3 1 CoA binding domain Succ_CoA_lig PF13607.6 ORF117579 - 0.00021 21.1 0.0 0.00053 19.8 0.0 1.7 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain Isochorismatase PF00857.20 ORF117579 - 0.12 12.6 0.0 5 7.3 0.0 2.7 3 0 0 3 3 3 0 Isochorismatase family NYD-SP28 PF14772.6 ORF108700 - 4.8e-13 49.0 11.8 4.8e-13 49.0 11.8 5.0 2 1 3 5 5 5 1 Sperm tail NYD-SP28_assoc PF14775.6 ORF108700 - 8.9e-07 28.9 0.3 8.9e-07 28.9 0.3 3.8 3 1 2 5 5 5 1 Sperm tail C-terminal domain HALZ PF02183.18 ORF108700 - 0.024 14.9 5.6 0.5 10.6 0.3 3.2 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF948 PF06103.11 ORF108700 - 0.16 12.3 0.1 0.16 12.3 0.1 3.4 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) Baculo_PEP_C PF04513.12 ORF108700 - 1.1 9.3 7.9 1.1 9.3 0.2 3.4 2 2 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus NABP PF07990.12 ORF108700 - 1.3 8.5 3.9 3 7.3 3.9 1.6 1 0 0 1 1 1 0 Nucleic acid binding protein NABP YtxH PF12732.7 ORF108700 - 10 6.8 9.0 24 5.5 2.9 3.7 2 2 0 2 2 2 0 YtxH-like protein NIF PF03031.18 ORF75191 - 2.4e-46 157.4 0.5 7.8e-46 155.7 0.5 2.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase rve_3 PF13683.6 ORF7262 - 0.15 11.9 0.2 2.4 8.0 0.0 2.9 3 0 0 3 3 3 0 Integrase core domain Acyltransferase PF01553.21 ORF4482 - 5.1e-16 58.5 0.0 2e-14 53.3 0.0 2.5 1 1 0 1 1 1 1 Acyltransferase T2SSB PF16537.5 ORF4482 - 0.096 12.3 0.0 0.32 10.6 0.0 1.9 1 0 0 1 1 1 0 Type II secretion system protein B DUF2070 PF09843.9 ORF4482 - 5.6 5.1 10.2 10 4.3 10.2 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MFS_1 PF07690.16 ORF33502 - 4.8e-33 114.5 21.2 4.6e-28 98.1 12.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF3642 PF12182.8 ORF33502 - 0.078 13.3 0.9 0.14 12.4 0.9 1.4 1 0 0 1 1 1 0 Bacterial lipoprotein MFS_1_like PF12832.7 ORF33502 - 1.1 8.0 25.9 2.7e+02 0.2 25.4 2.4 1 1 0 1 1 1 0 MFS_1 like family KH_1 PF00013.29 ORF22471 - 1e-14 54.1 0.1 1.9e-12 46.9 0.0 2.3 2 0 0 2 2 2 2 KH domain WW PF00397.26 ORF22471 - 9.4e-14 51.2 5.2 4.9e-06 26.5 0.3 2.5 2 0 0 2 2 2 2 WW domain PQQ PF01011.21 ORF22471 - 6.1e-06 25.9 0.0 0.2 11.6 0.0 2.5 2 0 0 2 2 2 2 PQQ enzyme repeat Glyco_hyd_101C PF17451.2 ORF22471 - 0.035 14.4 0.4 9 6.6 0.0 2.5 2 0 0 2 2 2 0 Glycosyl hydrolase 101 beta sandwich domain KH_2 PF07650.17 ORF22471 - 0.062 13.1 0.1 0.13 12.1 0.1 1.5 1 0 0 1 1 1 0 KH domain Glyco_hydro_31 PF01055.26 ORF103733 - 1.8e-106 357.0 7.2 1.8e-106 357.0 7.2 1.4 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF103733 - 0.0029 17.8 0.2 0.0093 16.2 0.2 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Glyco_hydro_31 PF01055.26 ORF103715 - 7.6e-107 358.2 7.2 7.6e-107 358.2 7.2 1.4 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF103715 - 0.0029 17.8 0.2 0.0093 16.2 0.2 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) TPR_MalT PF17874.1 ORF78238 - 5.5e-05 22.7 12.1 0.001 18.6 3.3 2.4 1 1 1 2 2 2 2 MalT-like TPR region TPR_1 PF00515.28 ORF78238 - 0.00047 19.8 3.4 0.51 10.3 0.1 4.1 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF78238 - 0.0011 19.2 10.5 0.13 12.6 1.5 3.8 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF78238 - 0.0025 17.8 6.0 1.3 9.3 0.3 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat NARP1 PF12569.8 ORF78238 - 0.034 13.1 0.1 0.37 9.7 0.0 2.0 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 TPR_8 PF13181.6 ORF78238 - 0.082 13.2 3.0 0.12 12.7 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF78238 - 0.22 11.4 4.6 1.3 9.0 0.4 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat MatE PF01554.18 ORF55623 - 4.1e-35 120.8 26.7 4.9e-20 71.8 2.8 2.6 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 ORF55623 - 0.00013 22.1 8.0 0.00013 22.1 8.0 3.4 2 1 0 3 3 3 1 Polysaccharide biosynthesis C-terminal domain Ephrin_rec_like PF07699.13 ORF33402 - 0.00088 19.0 1.7 0.0029 17.3 1.7 1.9 1 0 0 1 1 1 1 Putative ephrin-receptor like NCD3G PF07562.14 ORF33402 - 0.75 9.8 8.8 0.67 10.0 0.8 2.6 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR MSC PF09402.10 ORF33402 - 9.2 5.6 7.6 18 4.7 7.6 1.5 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain GYF PF02213.16 ORF31656 - 9.6e-13 47.6 2.6 9.6e-13 47.6 2.6 2.8 4 0 0 4 4 4 1 GYF domain DUF229 PF02995.17 ORF110275 - 9.4e-28 97.1 14.6 5.6e-22 78.0 2.6 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF110275 - 5.6e-12 45.7 4.9 9.8e-12 44.9 4.9 1.4 1 0 0 1 1 1 1 Sulfatase DUF1501 PF07394.12 ORF110275 - 0.0009 18.4 0.7 0.0012 18.0 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1501) Casc1_N PF15927.5 ORF110193 - 1.4e-15 57.6 6.8 1.3e-14 54.4 4.7 2.4 2 0 0 2 2 2 2 Cancer susceptibility candidate 1 N-terminus IL6Ra-bind PF09240.10 ORF110193 - 0.21 12.0 4.2 1.1 9.7 0.2 2.9 1 1 1 2 2 2 0 Interleukin-6 receptor alpha chain, binding COX8 PF02285.15 ORF104652 - 0.27 11.1 0.6 0.5 10.3 0.6 1.4 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII Ion_trans PF00520.31 ORF103149 - 5.9e-07 29.0 7.9 1.1e-06 28.0 7.6 1.6 1 1 0 1 1 1 1 Ion transport protein ENTH PF01417.20 ORF93872 - 8.4e-29 100.1 0.1 1.8e-28 99.1 0.0 1.6 2 0 0 2 2 2 1 ENTH domain ANTH PF07651.16 ORF93872 - 0.013 14.5 0.0 0.02 13.9 0.0 1.2 1 0 0 1 1 1 0 ANTH domain UPF0564 PF10595.9 ORF93501 - 2.8e-63 214.2 48.9 2.8e-63 214.2 48.9 2.0 1 1 1 2 2 2 1 Uncharacterised protein family UPF0564 GlnE PF03710.15 ORF71374 - 7.1e-103 343.4 0.6 7.1e-103 343.4 0.6 1.9 2 0 0 2 2 2 1 Glutamate-ammonia ligase adenylyltransferase GlnD_UR_UTase PF08335.11 ORF71374 - 8.3e-15 55.1 1.7 2e-12 47.4 0.9 2.9 2 0 0 2 2 2 2 GlnD PII-uridylyltransferase HALZ PF02183.18 ORF71374 - 0.026 14.8 0.1 0.17 12.1 0.0 2.5 3 0 0 3 3 3 0 Homeobox associated leucine zipper DUF641 PF04859.12 ORF66840 - 0.2 12.0 0.2 0.2 12.0 0.2 3.2 4 0 0 4 4 4 0 Plant protein of unknown function (DUF641) TMPIT PF07851.13 ORF66840 - 0.45 9.7 1.3 0.77 8.9 1.3 1.3 1 0 0 1 1 1 0 TMPIT-like protein BRE1 PF08647.11 ORF66840 - 0.72 10.0 7.1 0.35 11.0 2.3 2.7 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase Exonuc_VII_L PF02601.15 ORF66840 - 9.5 5.7 11.4 0.16 11.6 2.9 2.1 3 0 0 3 3 3 0 Exonuclease VII, large subunit PerC PF06069.11 ORF66114 - 0.13 12.5 0.0 0.32 11.3 0.0 1.6 1 0 0 1 1 1 0 PerC transcriptional activator DUF4672 PF15716.5 ORF66114 - 0.15 11.7 0.4 0.25 11.0 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) Ank_3 PF13606.6 ORF6519 - 0.023 15.2 0.0 0.11 13.1 0.0 2.3 1 0 0 1 1 1 0 Ankyrin repeat Ank_2 PF12796.7 ORF6519 - 0.054 14.1 0.0 0.15 12.7 0.0 1.7 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ferlin_C PF16165.5 ORF6519 - 0.29 11.1 3.9 0.65 9.9 3.9 1.6 1 0 0 1 1 1 0 Ferlin C-terminus EF-hand_1 PF00036.32 ORF3936 - 4.7e-11 41.4 3.5 2.4e-05 23.6 0.4 3.1 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF3936 - 1.1e-08 34.3 1.4 0.00036 20.2 0.3 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF3936 - 5.6e-07 28.8 1.6 0.00039 19.8 0.1 3.1 2 0 0 2 2 2 2 EF hand Ion_trans PF00520.31 ORF3936 - 7.9e-07 28.6 13.1 1.3e-06 27.8 13.1 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_8 PF13833.6 ORF3936 - 2.8e-05 23.9 6.5 0.0035 17.2 0.2 3.1 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF3936 - 5.2e-05 23.6 3.2 0.0002 21.7 2.8 2.2 2 0 0 2 2 2 1 EF-hand domain pair DUF2096 PF09869.9 ORF3936 - 0.048 13.7 0.2 0.68 10.0 0.0 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2096) SAP PF02037.27 ORF3936 - 0.053 13.3 0.1 0.053 13.3 0.1 2.4 3 0 0 3 3 3 0 SAP domain UPF0492 PF15744.5 ORF3936 - 0.067 12.4 9.1 0.1 11.8 9.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein family UPF0492 Eno-Rase_FAD_bd PF07055.12 ORF3936 - 0.096 13.1 2.3 1.7 9.1 0.7 2.9 2 0 0 2 2 2 0 Enoyl reductase FAD binding domain MerR-DNA-bind PF09278.11 ORF3936 - 0.19 12.3 2.1 2.8 8.5 0.0 3.2 2 0 0 2 2 2 0 MerR, DNA binding SPARC_Ca_bdg PF10591.9 ORF3936 - 0.45 10.8 3.2 0.67 10.3 0.3 2.7 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region SHIPPO-rpt PF07004.12 ORF33977 - 0.00097 20.0 4.4 0.32 12.0 0.2 4.9 4 0 0 4 4 4 1 Sperm-tail PG-rich repeat E3_UbLigase_R4 PF13764.6 ORF33977 - 0.47 8.6 3.3 0.15 10.2 0.3 1.5 2 0 0 2 2 2 0 E3 ubiquitin-protein ligase UBR4 PDZ_6 PF17820.1 ORF128139 - 0.012 15.4 3.6 1.4 8.8 0.1 3.5 4 1 0 4 4 4 0 PDZ domain PDZ PF00595.24 ORF128139 - 0.15 12.4 0.1 34 4.9 0.0 2.7 2 1 0 2 2 2 0 PDZ domain MatE PF01554.18 ORF125760 - 3.9e-35 120.9 28.5 2.2e-20 72.9 9.8 2.3 2 0 0 2 2 2 2 MatE DUF2456 PF10445.9 ORF125760 - 0.096 12.8 0.0 0.096 12.8 0.0 3.4 3 2 1 4 4 4 0 Protein of unknown function (DUF2456) FXa_inhibition PF14670.6 ORF125760 - 1.9 8.8 6.5 0.24 11.7 1.2 2.2 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site zf-rbx1 PF12678.7 ORF124637 - 3e-10 40.2 5.0 5.5e-10 39.4 5.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF124637 - 8.9e-08 32.3 7.3 2.8e-07 30.8 7.3 1.9 1 1 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF124637 - 8.9e-08 31.9 5.0 1.7e-07 30.9 5.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF124637 - 1.3e-06 28.1 7.3 7.5e-06 25.7 3.6 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF124637 - 2.2e-05 24.4 2.6 6.1e-05 23.0 2.6 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF124637 - 0.00012 22.0 4.1 0.00023 21.1 4.1 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF124637 - 0.00013 21.6 1.9 0.043 13.6 0.2 2.7 2 0 0 2 2 2 2 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF124637 - 0.0034 17.4 0.9 0.0072 16.4 0.9 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 ORF124637 - 0.011 15.9 5.4 1.4 9.1 1.8 2.5 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF124637 - 0.015 15.1 6.3 0.058 13.3 6.3 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF124637 - 0.034 14.3 3.6 0.12 12.5 3.6 2.0 1 1 0 1 1 1 0 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF124637 - 0.05 13.2 1.0 0.14 11.8 1.0 1.7 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF124637 - 0.089 12.7 4.1 0.046 13.6 1.6 1.8 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Tox-REase-2 PF15646.6 ORF124637 - 0.18 12.0 0.5 0.35 11.1 0.5 1.4 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 zf-RING_4 PF14570.6 ORF124637 - 0.35 10.7 3.5 0.93 9.3 3.5 1.8 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 ORF124637 - 0.61 10.5 2.2 1.3 9.4 2.2 1.5 1 0 0 1 1 1 0 RING-like domain UPF0547 PF10571.9 ORF124637 - 9 6.5 7.2 22 5.2 3.3 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 PerC PF06069.11 ORF107740 - 0.13 12.5 0.0 0.32 11.3 0.0 1.6 1 0 0 1 1 1 0 PerC transcriptional activator DUF4672 PF15716.5 ORF107740 - 0.15 11.7 0.4 0.25 11.0 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) zf-C2H2 PF00096.26 NODE_5673_length_1667_cov_6.792892_g422_i2forward_frame_1 - 0.00025 21.3 9.7 0.036 14.5 0.6 5.3 5 0 0 5 5 5 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_5673_length_1667_cov_6.792892_g422_i2forward_frame_1 - 0.00035 20.9 5.6 0.007 16.8 0.4 4.3 5 0 0 5 5 5 2 Zinc-finger double domain TerY_C PF15616.6 NODE_5673_length_1667_cov_6.792892_g422_i2forward_frame_1 - 0.035 14.2 0.3 0.035 14.2 0.3 2.9 2 1 2 4 4 4 0 TerY-C metal binding domain zf-C2H2_4 PF13894.6 NODE_5673_length_1667_cov_6.792892_g422_i2forward_frame_1 - 0.1 13.5 0.1 0.1 13.5 0.1 5.3 5 0 0 5 5 5 0 C2H2-type zinc finger zf_UBZ PF18439.1 NODE_5673_length_1667_cov_6.792892_g422_i2forward_frame_1 - 0.36 10.5 7.8 4.4 7.0 0.3 3.5 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-C2H2_2 PF12756.7 NODE_5673_length_1667_cov_6.792892_g422_i2forward_frame_1 - 6.7 7.1 10.8 23 5.4 0.3 3.4 1 1 2 3 3 3 0 C2H2 type zinc-finger (2 copies) NADH_dh_m_C1 PF15088.6 ORF80204 - 0.074 12.7 0.2 0.19 11.4 0.2 1.6 1 0 0 1 1 1 0 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial Aldedh PF00171.22 ORF7995 - 5.2e-41 140.6 0.0 7.1e-41 140.2 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family HATPase_c PF02518.26 ORF71706 - 1.2e-16 61.2 0.2 2.2e-15 57.1 0.0 2.8 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF71706 - 3.7e-07 30.1 0.0 9.3e-07 28.8 0.0 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 ORF71706 - 0.0018 18.5 0.3 0.004 17.4 0.3 1.7 1 0 0 1 1 1 1 PAS domain Fer2 PF00111.27 ORF69895 - 0.0013 18.6 0.4 0.0033 17.3 0.4 1.7 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain PDZ_6 PF17820.1 ORF69895 - 0.0054 16.6 0.1 0.02 14.7 0.1 2.0 2 0 0 2 2 2 1 PDZ domain PDZ PF00595.24 ORF69895 - 0.15 12.4 0.0 0.37 11.2 0.0 1.6 1 0 0 1 1 1 0 PDZ domain Ion_trans PF00520.31 ORF6904 - 3.9e-21 75.4 14.8 3.9e-21 75.4 14.8 1.4 2 0 0 2 2 2 1 Ion transport protein EF-hand_1 PF00036.32 ORF6904 - 5.9e-11 41.1 0.4 4.5e-05 22.7 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF6904 - 3e-08 34.0 0.1 9.1e-08 32.4 0.1 1.9 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF6904 - 4.2e-08 32.5 0.2 0.02 14.8 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF6904 - 6.9e-08 31.6 0.3 0.00026 20.3 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF6904 - 1.5e-05 24.8 0.0 0.015 15.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF6904 - 0.0051 17.1 0.1 0.027 14.8 0.1 2.2 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region KH_dom-like PF14714.6 ORF42792 - 4.1e-23 81.5 0.1 2.3e-22 79.1 0.0 2.2 2 0 0 2 2 2 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MMR_HSR1 PF01926.23 ORF42792 - 3.5e-16 59.3 0.0 6.2e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF42792 - 1.4e-08 34.4 0.0 7.7e-08 32.0 0.0 2.2 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF42792 - 1.3e-05 24.8 0.0 0.0065 16.0 0.0 3.6 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 ORF42792 - 0.0013 18.6 0.0 0.54 10.1 0.0 2.6 3 0 0 3 3 3 2 RsgA GTPase Dynamin_N PF00350.23 ORF42792 - 0.0016 18.6 0.0 0.011 15.9 0.0 2.1 1 1 1 2 2 2 1 Dynamin family AIG1 PF04548.16 ORF42792 - 0.0047 16.3 0.0 0.011 15.1 0.0 1.5 1 1 0 1 1 1 1 AIG1 family Ras PF00071.22 ORF42792 - 0.011 15.3 0.0 0.43 10.2 0.0 3.0 3 1 0 3 3 3 0 Ras family Roc PF08477.13 ORF42792 - 0.015 15.5 0.0 0.052 13.8 0.0 2.0 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase IIGP PF05049.13 ORF42792 - 0.11 11.5 0.0 0.22 10.5 0.0 1.4 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) ABC_tran PF00005.27 ORF42792 - 0.14 12.7 0.0 0.29 11.7 0.0 1.5 1 0 0 1 1 1 0 ABC transporter Nsp3_PL2pro PF12124.8 ORF42792 - 0.19 11.5 0.0 0.36 10.7 0.0 1.4 1 0 0 1 1 1 0 Coronavirus polyprotein cleavage domain MlaD PF02470.20 ORF41182 - 5.2e-37 126.0 0.5 1.4e-14 54.1 0.0 3.4 3 0 0 3 3 3 3 MlaD protein DASH_Duo1 PF08651.10 ORF41182 - 0.0011 18.7 3.0 0.0023 17.7 1.3 2.3 1 1 2 3 3 3 1 DASH complex subunit Duo1 DUF948 PF06103.11 ORF41182 - 0.0019 18.4 1.0 0.0055 16.9 0.7 2.0 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF948) DHR10 PF18595.1 ORF41182 - 0.0055 16.7 1.8 0.013 15.6 1.8 1.5 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain DHC_N2 PF08393.13 ORF41182 - 0.0056 15.8 1.0 0.0088 15.2 1.0 1.2 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 DUF445 PF04286.12 ORF41182 - 0.016 15.0 0.2 0.025 14.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF445) MapZ_EC1 PF18041.1 ORF41182 - 0.088 13.1 0.9 0.17 12.1 0.9 1.4 1 0 0 1 1 1 0 MapZ extracellular domain 1 PilJ PF13675.6 ORF41182 - 0.16 12.0 1.8 0.31 11.1 1.8 1.4 1 0 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term BLOC1_2 PF10046.9 ORF41182 - 0.33 11.3 2.7 0.81 10.0 2.7 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 OmpH PF03938.14 ORF41182 - 0.72 10.2 4.1 1.8 8.9 3.8 1.8 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) DUF773 PF05600.12 ORF41182 - 0.96 8.1 7.8 1.4 7.6 7.8 1.1 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 SLX9 PF15341.6 ORF41182 - 4.1 7.8 8.0 9.7 6.6 2.6 2.2 1 1 1 2 2 2 0 Ribosome biogenesis protein SLX9 YlbD_coat PF14071.6 ORF41182 - 8 6.7 7.0 63 3.8 2.3 2.7 1 1 2 3 3 3 0 Putative coat protein HATPase_c PF02518.26 ORF23414 - 1.2e-16 61.2 0.2 2.2e-15 57.1 0.0 2.8 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF23414 - 3.7e-07 30.1 0.0 9.3e-07 28.8 0.0 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 ORF23414 - 0.0018 18.5 0.3 0.004 17.4 0.3 1.7 1 0 0 1 1 1 1 PAS domain ArsC PF03960.15 ORF23054 - 0.24 11.5 0.8 9.4 6.3 0.1 2.7 2 0 0 2 2 2 0 ArsC family NADH_dh_m_C1 PF15088.6 ORF21488 - 0.074 12.7 0.2 0.19 11.4 0.2 1.6 1 0 0 1 1 1 0 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial YkuD PF03734.14 ORF18074 - 3.7e-31 108.5 0.1 5.9e-31 107.9 0.1 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain PG_binding_1 PF01471.18 ORF18074 - 1.1e-09 38.4 0.3 6e-07 29.6 0.0 3.3 3 0 0 3 3 3 2 Putative peptidoglycan binding domain HD_4 PF13328.6 ORF150593 - 5.1e-42 143.2 0.7 1.1e-41 142.2 0.1 1.9 2 0 0 2 2 2 1 HD domain RelA_SpoT PF04607.17 ORF150593 - 7.5e-27 93.9 0.0 1.6e-26 92.9 0.0 1.6 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins TGS PF02824.21 ORF150593 - 1.7e-13 50.4 0.0 3.6e-13 49.3 0.0 1.6 1 0 0 1 1 1 1 TGS domain HD PF01966.22 ORF150593 - 4.2e-09 36.7 0.2 1.1e-07 32.0 0.1 3.3 3 1 0 3 3 3 1 HD domain FA_desaturase PF00487.24 ORF149879 - 4e-37 128.4 24.0 4e-37 128.4 24.0 2.1 1 1 1 2 2 2 1 Fatty acid desaturase Cyt-b5 PF00173.28 ORF149879 - 2.6e-15 56.3 0.1 6e-15 55.1 0.1 1.6 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain SET PF00856.28 ORF14880 - 6.3e-09 36.4 0.0 2.3e-08 34.6 0.0 2.0 2 1 0 2 2 2 1 SET domain PIH1_CS PF18201.1 ORF14880 - 1.4e-06 28.6 0.0 2.5e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 PIH1 CS-like domain UCH PF00443.29 ORF148305 - 1.2e-44 152.8 1.2 1.2e-44 152.8 1.2 3.1 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF148305 - 1.7e-20 73.9 1.2 1.7e-20 73.9 1.2 2.8 2 2 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase Thioredoxin PF00085.20 ORF148299 - 7.5e-49 164.0 0.0 7.6e-16 58.0 0.0 3.2 3 0 0 3 3 3 3 Thioredoxin TraF PF13728.6 ORF148299 - 2e-10 40.9 0.1 0.001 18.9 0.1 3.4 3 0 0 3 3 3 3 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF148299 - 1e-07 32.1 0.4 0.055 13.8 0.0 4.7 4 2 2 6 6 6 2 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF148299 - 2.5e-07 31.1 3.3 0.16 12.4 0.0 4.4 4 1 0 4 4 4 3 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF148299 - 5.6e-07 29.6 0.6 0.25 11.5 0.0 4.0 4 1 0 4 4 4 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF148299 - 9.2e-07 28.5 0.0 0.052 12.9 0.0 3.1 3 0 0 3 3 3 2 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 ORF148299 - 3.2e-06 27.1 0.3 0.021 14.8 0.0 3.5 4 0 0 4 4 4 2 AhpC/TSA family Glutaredoxin PF00462.24 ORF148299 - 0.0092 16.2 2.2 3.1 8.1 0.0 4.2 4 0 0 4 4 4 1 Glutaredoxin Redoxin PF08534.10 ORF148299 - 0.03 14.0 0.0 4.6 7.0 0.0 3.0 3 0 0 3 3 3 0 Redoxin HATPase_c PF02518.26 ORF117653 - 1.2e-16 61.2 0.2 2.2e-15 57.1 0.0 2.8 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF117653 - 3.7e-07 30.1 0.0 9.3e-07 28.8 0.0 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 ORF117653 - 0.0018 18.5 0.3 0.004 17.4 0.3 1.7 1 0 0 1 1 1 1 PAS domain PS_pyruv_trans PF04230.13 ORF107615 - 6.9e-40 137.8 0.0 1.1e-39 137.1 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide pyruvyl transferase Sortase PF04203.13 ORF107615 - 0.025 14.4 0.0 0.057 13.2 0.0 1.5 1 0 0 1 1 1 0 Sortase domain FA_desaturase PF00487.24 ORF105606 - 4e-37 128.4 24.0 4e-37 128.4 24.0 2.1 1 1 1 2 2 2 1 Fatty acid desaturase Cyt-b5 PF00173.28 ORF105606 - 2.6e-15 56.3 0.1 6e-15 55.1 0.1 1.6 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Phage_integrase PF00589.22 ORF87641 - 0.0014 18.4 0.0 0.0026 17.6 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Nrap_D4 PF17405.2 ORF87641 - 0.12 11.8 0.0 0.21 10.9 0.0 1.4 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 MgrB PF13998.6 ORF64445 - 0.036 14.0 0.8 9.8 6.1 0.0 2.6 2 0 0 2 2 2 0 MgrB protein SO_alpha_A3 PF17806.1 ORF44797 - 0.11 12.9 0.4 5.4 7.4 0.0 2.5 2 0 0 2 2 2 0 Sarcosine oxidase A3 domain Peptidase_M3 PF01432.20 ORF36912 - 2.7e-135 452.2 0.0 3.2e-135 451.9 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 cNMP_binding PF00027.29 ORF19221 - 0.0022 18.0 0.0 1.2 9.2 0.0 2.6 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain DUF4175 PF13779.6 ORF19221 - 0.32 8.9 7.1 0.5 8.2 7.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) DUF676 PF05057.14 ORF139522 - 1.4e-29 103.2 0.1 2.7e-29 102.3 0.1 1.4 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF139522 - 6.4e-08 32.7 0.0 1.1e-07 32.0 0.0 1.5 1 0 0 1 1 1 1 Palmitoyl protein thioesterase PGAP1 PF07819.13 ORF139522 - 2.6e-06 27.3 0.0 1.3e-05 25.1 0.0 2.3 2 1 0 2 2 2 1 PGAP1-like protein LCAT PF02450.15 ORF139522 - 0.00025 20.3 1.6 0.0003 20.1 0.0 1.9 2 0 0 2 2 2 1 Lecithin:cholesterol acyltransferase Hydrolase_4 PF12146.8 ORF139522 - 0.0064 15.8 0.1 0.16 11.2 0.0 2.5 3 0 0 3 3 3 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF139522 - 0.0076 15.9 0.0 0.075 12.7 0.0 2.5 1 1 1 2 2 2 1 alpha/beta hydrolase fold AA_kinase PF00696.28 ORF13392 - 2.6e-26 92.7 0.0 3.4e-26 92.3 0.0 1.1 1 0 0 1 1 1 1 Amino acid kinase family RCC1_2 PF13540.6 ORF126676 - 2.1e-17 62.4 43.6 0.12 12.2 0.0 12.5 13 0 0 13 13 13 10 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF126676 - 2.1e-06 27.9 16.4 20 5.2 0.0 10.3 6 2 4 10 10 10 1 Uncharacterised ACR, YagE family COG1723 Choline_sulf_C PF12411.8 ORF126676 - 0.19 11.6 0.5 13 5.6 0.0 4.0 4 0 0 4 4 4 0 Choline sulfatase enzyme C terminal NOZZLE PF08744.10 ORF126676 - 0.41 10.1 14.3 0.49 9.8 0.6 3.6 2 1 0 3 3 3 0 Plant transcription factor NOZZLE DDE_Tnp_1_3 PF13612.6 ORF126676 - 0.62 10.1 3.5 89 3.1 0.0 4.9 6 0 0 6 6 6 0 Transposase DDE domain Ribosomal_L29 PF00831.23 ORF126676 - 7.9 6.5 6.3 39 4.3 0.1 3.5 4 0 0 4 4 4 0 Ribosomal L29 protein Phage_integrase PF00589.22 ORF116716 - 0.0014 18.4 0.0 0.0026 17.6 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Nrap_D4 PF17405.2 ORF116716 - 0.094 12.1 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 zf-C2HC_2 PF13913.6 ORF62201 - 5.2e-24 83.6 16.7 3.4e-11 42.8 2.0 3.6 3 0 0 3 3 3 3 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF62201 - 0.0046 17.7 6.2 0.72 10.9 0.1 4.0 3 0 0 3 3 3 1 C2H2-type zinc finger zf_UBZ PF18439.1 ORF62201 - 0.0073 15.9 1.1 4.4 7.0 0.2 2.9 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-C2H2 PF00096.26 ORF62201 - 0.012 16.0 4.2 2.2 8.9 0.1 4.0 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_11 PF16622.5 ORF62201 - 0.072 12.9 3.7 0.72 9.7 0.2 3.3 3 0 0 3 3 3 0 zinc-finger C2H2-type c-SKI_SMAD_bind PF08782.10 ORF62201 - 0.12 12.6 4.5 0.62 10.3 0.1 3.3 3 0 0 3 3 3 0 c-SKI Smad4 binding domain YacG PF03884.14 ORF62201 - 0.3 10.8 4.5 0.13 12.1 1.1 2.2 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG DUF2318 PF10080.9 ORF62201 - 0.32 11.1 4.1 0.36 11.0 0.3 2.8 3 0 0 3 3 3 0 Predicted membrane protein (DUF2318) zf-CHCC PF10276.9 ORF62201 - 1.3 9.1 11.4 2.9 8.0 2.1 3.3 3 0 0 3 3 3 0 Zinc-finger domain HypA PF01155.19 ORF62201 - 5.5 7.0 5.9 43 4.2 0.1 3.2 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PKD_channel PF08016.12 ORF48237 - 5.9e-19 68.1 15.7 3.2e-18 65.6 15.7 1.9 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF48237 - 2.3e-13 50.0 12.6 4.4e-13 49.0 12.6 1.5 1 0 0 1 1 1 1 Ion transport protein PTRF_SDPR PF15237.6 ORF48237 - 1.2 8.7 4.9 0.61 9.7 2.1 1.8 2 0 0 2 2 2 0 PTRF/SDPR family DUF4440 PF14534.6 ORF39310 - 7e-11 42.5 0.1 0.0079 16.6 0.0 3.7 3 0 0 3 3 3 3 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF39310 - 1.4e-09 38.5 2.9 0.045 14.4 0.0 4.9 3 2 2 5 5 5 3 SnoaL-like domain SnoaL_4 PF13577.6 ORF39310 - 6.3e-06 26.3 0.1 1.2 9.2 0.0 3.4 3 0 0 3 3 3 3 SnoaL-like domain OB_NTP_bind PF07717.16 ORF39310 - 7e-05 23.1 0.6 4.3 7.8 0.0 4.0 4 0 0 4 4 4 2 Oligonucleotide/oligosaccharide-binding (OB)-fold CSD PF00313.22 ORF39310 - 0.00089 19.1 5.9 4.9 7.1 0.1 4.2 4 0 0 4 4 4 3 'Cold-shock' DNA-binding domain Polyketide_cyc2 PF10604.9 ORF39310 - 0.002 18.4 1.3 12 6.1 0.0 5.0 5 1 0 5 5 5 1 Polyketide cyclase / dehydrase and lipid transport OLF PF02191.16 ORF39310 - 0.021 14.4 1.9 9.8 5.6 0.0 3.7 4 0 0 4 4 4 0 Olfactomedin-like domain MccV PF17508.2 ORF39310 - 1.1 9.8 6.2 16 6.1 0.1 3.5 3 0 0 3 3 3 0 Microcin V bacteriocin GBP_PSP PF02425.15 ORF39310 - 5.5 6.7 9.6 57 3.5 0.0 4.4 4 0 0 4 4 4 0 Paralytic/GBP/PSP peptide DNA_pol_A_exo1 PF01612.20 ORF38482 - 5.2e-26 91.4 0.5 8.8e-26 90.7 0.5 1.3 1 0 0 1 1 1 1 3'-5' exonuclease S1 PF00575.23 ORF38482 - 0.00039 20.7 0.1 0.00089 19.6 0.1 1.6 1 0 0 1 1 1 1 S1 RNA binding domain tRNA-synt_1c PF00749.21 ORF151851 - 1.8e-128 427.8 0.0 2.3e-128 427.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 ORF151851 - 1.3e-63 214.0 0.0 2.6e-63 213.0 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain zf-C2HC_2 PF13913.6 ORF139937 - 5.2e-24 83.6 16.7 3.4e-11 42.8 2.0 3.6 3 0 0 3 3 3 3 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF139937 - 0.0046 17.7 6.2 0.72 10.9 0.1 4.0 3 0 0 3 3 3 1 C2H2-type zinc finger zf_UBZ PF18439.1 ORF139937 - 0.0073 15.9 1.1 4.4 7.0 0.2 2.9 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-C2H2 PF00096.26 ORF139937 - 0.012 16.0 4.2 2.2 8.9 0.1 4.0 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_11 PF16622.5 ORF139937 - 0.072 12.9 3.7 0.72 9.7 0.2 3.3 3 0 0 3 3 3 0 zinc-finger C2H2-type c-SKI_SMAD_bind PF08782.10 ORF139937 - 0.12 12.6 4.5 0.62 10.3 0.1 3.3 3 0 0 3 3 3 0 c-SKI Smad4 binding domain YacG PF03884.14 ORF139937 - 0.3 10.8 4.5 0.13 12.1 1.1 2.2 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG DUF2318 PF10080.9 ORF139937 - 0.32 11.1 4.1 0.36 11.0 0.3 2.8 3 0 0 3 3 3 0 Predicted membrane protein (DUF2318) zf-CHCC PF10276.9 ORF139937 - 1.3 9.1 11.4 2.9 8.0 2.1 3.3 3 0 0 3 3 3 0 Zinc-finger domain HypA PF01155.19 ORF139937 - 5.5 7.0 5.9 43 4.2 0.1 3.2 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Dynamin_M PF01031.20 ORF132770 - 2.3e-80 269.9 0.0 3.4e-80 269.3 0.0 1.3 1 0 0 1 1 1 1 Dynamin central region GED PF02212.18 ORF132770 - 2.2e-22 79.0 4.1 3.2e-21 75.3 0.0 3.7 4 0 0 4 4 4 1 Dynamin GTPase effector domain ALMS_motif PF15309.6 ORF132770 - 0.11 12.9 5.9 0.3 11.6 1.9 2.6 2 0 0 2 2 2 0 ALMS motif CHASE6_C PF17150.4 ORF132770 - 0.13 12.9 0.1 0.91 10.2 0.0 2.4 2 0 0 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain DUF3275 PF11679.8 ORF132770 - 3.8 7.4 10.7 1.1 9.2 4.9 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3275) zf-C2HC_2 PF13913.6 ORF101036 - 5.2e-24 83.6 16.7 3.4e-11 42.8 2.0 3.6 3 0 0 3 3 3 3 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF101036 - 0.0046 17.7 6.2 0.72 10.9 0.1 4.0 3 0 0 3 3 3 1 C2H2-type zinc finger zf_UBZ PF18439.1 ORF101036 - 0.0073 15.9 1.1 4.4 7.0 0.2 2.9 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-C2H2 PF00096.26 ORF101036 - 0.012 16.0 4.2 2.2 8.9 0.1 4.0 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_11 PF16622.5 ORF101036 - 0.072 12.9 3.7 0.72 9.7 0.2 3.3 3 0 0 3 3 3 0 zinc-finger C2H2-type c-SKI_SMAD_bind PF08782.10 ORF101036 - 0.12 12.6 4.5 0.62 10.3 0.1 3.3 3 0 0 3 3 3 0 c-SKI Smad4 binding domain YacG PF03884.14 ORF101036 - 0.3 10.8 4.5 0.13 12.1 1.1 2.2 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG DUF2318 PF10080.9 ORF101036 - 0.32 11.1 4.1 0.36 11.0 0.3 2.8 3 0 0 3 3 3 0 Predicted membrane protein (DUF2318) zf-CHCC PF10276.9 ORF101036 - 1.3 9.1 11.4 2.9 8.0 2.1 3.3 3 0 0 3 3 3 0 Zinc-finger domain HypA PF01155.19 ORF101036 - 5.5 7.0 5.9 43 4.2 0.1 3.2 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AAA_23 PF13476.6 ORF98470 - 3.6e-19 70.1 5.6 2.4e-17 64.1 0.0 2.5 1 1 1 2 2 2 1 AAA domain SMC_N PF02463.19 ORF98470 - 6e-19 68.3 0.0 1.4e-18 67.2 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF98470 - 7e-06 25.7 0.0 1.5e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF98470 - 2.3e-05 24.3 0.0 0.0024 17.7 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 ORF98470 - 0.00027 20.8 0.0 0.34 10.7 0.0 2.5 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 ORF98470 - 0.0043 17.3 4.7 0.023 15.0 0.4 3.6 2 2 0 2 2 2 1 AAA domain NTPase_P4 PF11602.8 ORF98470 - 0.018 14.2 0.0 0.029 13.6 0.0 1.2 1 0 0 1 1 1 0 ATPase P4 of dsRNA bacteriophage phi-12 DUF2161 PF09929.9 ORF98470 - 0.054 13.6 0.2 0.12 12.5 0.2 1.6 1 0 0 1 1 1 0 Putative PD-(D/E)XK phosphodiesterase (DUF2161) ABC_tran PF00005.27 ORF98470 - 0.063 13.8 5.7 2.1 8.9 0.0 3.4 2 1 0 2 2 2 0 ABC transporter HTH_Tnp_1 PF01527.20 ORF98470 - 0.08 13.3 0.3 3.8 7.9 0.2 3.2 2 1 1 3 3 3 0 Transposase Sec34 PF04136.15 ORF98470 - 5.1 7.0 16.5 0.22 11.4 0.2 3.8 2 1 1 4 4 4 0 Sec34-like family SNF PF00209.18 ORF95703 - 2.2e-92 310.4 42.0 2.9e-91 306.7 42.0 1.9 1 1 0 1 1 1 1 Sodium:neurotransmitter symporter family JmjC PF02373.22 ORF94799 - 1e-35 122.6 0.8 3.3e-35 120.9 0.1 2.3 2 0 0 2 2 2 1 JmjC domain, hydroxylase zf-C5HC2 PF02928.16 ORF94799 - 3.3e-09 37.0 13.0 7.1e-09 35.9 13.0 1.6 1 0 0 1 1 1 1 C5HC2 zinc finger JmjN PF02375.17 ORF94799 - 5e-09 36.0 0.5 2e-08 34.1 0.5 2.1 1 0 0 1 1 1 1 jmjN domain Saf_2TM PF18303.1 ORF94799 - 0.045 13.4 0.1 0.087 12.4 0.1 1.4 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain zf-AN1 PF01428.16 ORF94799 - 4.1 7.6 12.5 10 6.4 12.5 1.7 1 0 0 1 1 1 0 AN1-like Zinc finger Ank_2 PF12796.7 ORF7727 - 2e-19 70.0 0.1 8.8e-05 23.0 0.0 4.6 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF7727 - 2.6e-16 58.0 4.0 0.00035 20.8 0.0 6.2 6 0 0 6 6 6 4 Ankyrin repeat Ank_4 PF13637.6 ORF7727 - 3.3e-16 59.4 0.8 2.2e-05 24.9 0.1 4.2 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF7727 - 1.4e-12 47.6 2.7 4e-05 23.8 0.0 4.8 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF7727 - 3.5e-12 46.2 4.9 8e-05 22.9 0.1 6.1 6 0 0 6 6 6 3 Ankyrin repeat Aa_trans PF01490.18 ORF56442 - 8e-54 182.9 35.1 9.3e-54 182.7 35.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF56442 - 6.6e-06 25.4 14.8 6.6e-06 25.4 14.8 2.1 1 1 1 2 2 2 1 Tryptophan/tyrosine permease family Thioredoxin_6 PF13848.6 ORF54465 - 6.2e-10 39.3 11.6 4.3e-07 30.0 0.5 3.6 2 1 2 4 4 4 2 Thioredoxin-like domain Thioredoxin PF00085.20 ORF54465 - 0.0046 16.9 0.1 0.068 13.2 0.0 2.7 2 0 0 2 2 2 1 Thioredoxin Transcrip_reg PF01709.20 ORF54465 - 0.04 13.3 0.0 0.068 12.6 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator SHIPPO-rpt PF07004.12 ORF42567 - 0.0014 19.4 4.8 0.32 12.0 0.2 4.8 4 0 0 4 4 4 1 Sperm-tail PG-rich repeat E3_UbLigase_R4 PF13764.6 ORF42567 - 0.46 8.6 3.3 0.15 10.2 0.3 1.5 2 0 0 2 2 2 0 E3 ubiquitin-protein ligase UBR4 Spo0A_C PF08769.11 ORF61655 - 0.021 14.9 0.2 0.062 13.4 0.0 1.9 2 0 0 2 2 2 0 Sporulation initiation factor Spo0A C terminal HAD_2 PF13419.6 ORF61655 - 0.033 14.3 1.0 0.14 12.3 0.2 2.1 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase EF-hand_13 PF17958.1 ORF59095 - 2e-36 123.7 0.3 1.2e-35 121.2 0.1 2.4 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF59095 - 1.6e-21 76.5 12.2 2.3e-13 50.4 2.8 4.2 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF59095 - 2e-12 46.0 9.4 0.031 14.2 0.1 5.7 5 0 0 5 5 5 4 EF-hand domain EF-hand_1 PF00036.32 ORF59095 - 1.5e-11 42.9 13.3 0.022 14.3 0.1 6.1 6 0 0 6 6 6 4 EF hand EF-hand_8 PF13833.6 ORF59095 - 1.9e-08 34.0 11.0 0.006 16.4 0.3 5.0 4 1 0 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF59095 - 1.8e-05 24.0 8.1 0.027 13.9 0.1 4.3 4 0 0 4 4 4 2 EF hand WXG100 PF06013.12 ORF43644 - 0.019 15.2 2.0 4 7.7 0.0 3.6 3 1 1 4 4 4 0 Proteins of 100 residues with WXG Apolipoprotein PF01442.18 ORF43644 - 0.084 12.7 0.0 2.1 8.2 0.0 2.6 2 1 1 3 3 3 0 Apolipoprotein A1/A4/E domain YflT PF11181.8 ORF43644 - 0.9 10.1 2.7 1.3 9.5 0.0 2.6 3 0 0 3 3 3 0 Heat induced stress protein YflT MORN PF02493.20 ORF36017 - 2.8e-65 212.5 93.5 2.3e-06 27.1 1.1 19.4 19 0 0 19 19 19 18 MORN repeat Tudor_2 PF18104.1 ORF36017 - 0.042 13.5 3.1 0.83 9.4 0.0 4.0 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain tRNA-synt_1_2 PF13603.6 ORF3534 - 6.2e-37 126.9 0.0 1.1e-36 126.0 0.0 1.4 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1 PF00133.22 ORF3534 - 1.4e-28 99.5 0.3 1.2e-09 37.0 0.0 3.2 3 0 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF3534 - 1.7e-17 63.8 0.0 3e-17 63.0 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF3534 - 6.7e-07 28.4 0.0 4.3e-05 22.4 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) WD40 PF00400.32 ORF132748 - 1.2e-19 70.3 0.4 0.00016 22.4 0.1 4.6 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF132748 - 3.2e-09 37.0 0.9 0.00044 20.5 0.1 3.7 2 2 2 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain PPP5 PF08321.12 ORF132748 - 0.19 12.0 4.2 0.26 11.6 2.1 2.3 2 0 0 2 2 2 0 PPP5 TPR repeat region Glyco_hydro_127 PF07944.12 ORF108595 - 9.8e-15 54.0 0.0 1.2e-14 53.7 0.0 1.1 1 0 0 1 1 1 1 Beta-L-arabinofuranosidase, GH127 PK PF00224.21 ORF95913 - 6.1e-139 462.7 2.4 8.4e-139 462.3 2.4 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF95913 - 6.2e-29 100.6 0.5 2.1e-28 98.9 0.5 2.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF95913 - 0.0025 17.0 1.2 0.0061 15.7 0.6 1.7 1 1 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family Ank_2 PF12796.7 ORF72978 - 1.2e-25 89.9 1.4 8e-12 45.6 0.1 2.6 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Bromodomain PF00439.25 ORF72978 - 2.8e-22 78.6 0.4 5.4e-21 74.4 0.2 2.5 2 0 0 2 2 2 1 Bromodomain Ank_4 PF13637.6 ORF72978 - 1.1e-20 73.7 0.9 1.7e-10 41.2 0.1 3.5 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF72978 - 2.7e-19 67.2 0.1 0.0003 21.0 0.1 4.9 4 0 0 4 4 4 4 Ankyrin repeat Ank PF00023.30 ORF72978 - 2.9e-17 62.2 0.0 0.0048 17.3 0.1 4.8 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF72978 - 1.5e-16 60.2 5.2 4.2e-06 26.9 0.5 4.0 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF65628 - 1.2e-25 89.9 1.4 8e-12 45.6 0.1 2.6 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Bromodomain PF00439.25 ORF65628 - 2.8e-22 78.6 0.4 5.4e-21 74.4 0.2 2.5 2 0 0 2 2 2 1 Bromodomain Ank_4 PF13637.6 ORF65628 - 1.1e-20 73.7 0.9 1.7e-10 41.2 0.1 3.5 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF65628 - 2.7e-19 67.2 0.1 0.0003 21.0 0.1 4.9 4 0 0 4 4 4 4 Ankyrin repeat Ank PF00023.30 ORF65628 - 2.9e-17 62.2 0.0 0.0048 17.3 0.1 4.8 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF65628 - 1.5e-16 60.2 5.2 4.2e-06 26.9 0.5 4.0 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Spt5_N PF11942.8 ORF55768 - 1.6 9.8 8.8 0.45 11.5 2.0 2.9 3 0 0 3 3 3 0 Spt5 transcription elongation factor, acidic N-terminal PK PF00224.21 ORF5514 - 6.1e-139 462.7 2.4 8.4e-139 462.3 2.4 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF5514 - 6.2e-29 100.6 0.5 2.1e-28 98.9 0.5 2.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF5514 - 0.0025 17.0 1.2 0.0061 15.7 0.6 1.7 1 1 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 ORF50220 - 6.1e-139 462.7 2.4 8.4e-139 462.3 2.4 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF50220 - 6.2e-29 100.6 0.5 2.1e-28 98.9 0.5 2.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF50220 - 0.0025 17.0 1.2 0.0061 15.7 0.6 1.7 1 1 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 ORF3497 - 6.1e-139 462.7 2.4 8.4e-139 462.3 2.4 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF3497 - 6.2e-29 100.6 0.5 2.1e-28 98.9 0.5 2.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF3497 - 0.0025 17.0 1.2 0.0061 15.7 0.6 1.7 1 1 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family Sulfatase PF00884.23 ORF33698 - 2e-87 293.5 0.1 2.7e-87 293.1 0.1 1.1 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 ORF33698 - 0.00017 22.3 0.0 0.00052 20.7 0.0 1.8 1 0 0 1 1 1 1 C-terminal region of aryl-sulfatase Phosphodiest PF01663.22 ORF33698 - 0.00037 20.2 0.3 0.13 11.8 0.5 2.9 2 1 1 3 3 3 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF229 PF02995.17 ORF33698 - 0.00055 18.7 0.0 0.0076 14.9 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF229) Phosphoesterase PF04185.14 ORF33698 - 0.019 14.2 0.0 0.05 12.8 0.0 1.7 1 0 0 1 1 1 0 Phosphoesterase family DUF1501 PF07394.12 ORF33698 - 0.089 11.8 0.0 0.21 10.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) Alpha-amylase PF00128.24 ORF30548 - 3.5e-128 427.9 0.0 4.7e-128 427.5 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, catalytic domain DUF3459 PF11941.8 ORF30548 - 1.6e-08 34.8 0.1 3.6e-07 30.4 0.1 2.6 2 0 0 2 2 2 1 Domain of unknown function (DUF3459) Malt_amylase_C PF16657.5 ORF30548 - 0.00072 19.6 0.0 0.002 18.2 0.0 1.8 1 1 0 1 1 1 1 Maltogenic Amylase, C-terminal domain hDGE_amylase PF14701.6 ORF30548 - 0.0048 16.0 0.0 0.0072 15.5 0.0 1.1 1 0 0 1 1 1 1 Glycogen debranching enzyme, glucanotransferase domain GlnD_UR_UTase PF08335.11 ORF26144 - 0.091 12.9 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 GlnD PII-uridylyltransferase L27_N PF09060.10 ORF26144 - 0.2 11.8 1.7 1.4 9.0 0.1 2.5 2 0 0 2 2 2 0 L27_N Peptidase_S11 PF00768.20 ORF152249 - 5.2e-42 143.9 1.6 1.3e-20 73.9 0.1 2.3 2 0 0 2 2 2 2 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 ORF152249 - 8.2e-05 22.3 0.1 0.004 16.8 0.0 2.2 2 0 0 2 2 2 2 Beta-lactamase enzyme family Asp PF00026.23 ORF128103 - 7e-08 32.3 0.0 0.0073 15.8 0.0 2.1 2 0 0 2 2 2 2 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF128103 - 0.16 11.8 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal Pkinase PF00069.25 ORF126032 - 1.4e-75 254.1 0.0 2.3e-75 253.3 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF126032 - 8.8e-34 117.0 0.0 1.6e-33 116.1 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF126032 - 2.9e-17 60.8 12.2 1.7e-05 24.0 0.1 5.1 5 0 0 5 5 5 3 EF hand EF-hand_7 PF13499.6 ORF126032 - 3.5e-16 59.4 9.2 6.5e-12 45.7 0.2 4.3 4 0 0 4 4 4 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF126032 - 6.9e-15 53.6 8.5 0.0001 21.9 0.1 4.8 5 0 0 5 5 5 3 EF-hand domain EF-hand_5 PF13202.6 ORF126032 - 1.5e-12 46.4 6.8 0.00039 19.8 0.0 4.0 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF126032 - 2.5e-12 46.5 5.0 2.8e-09 36.7 0.2 3.6 3 0 0 3 3 3 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF126032 - 6e-05 23.3 5.7 0.0045 17.3 1.0 3.7 3 1 0 3 3 3 1 Secreted protein acidic and rich in cysteine Ca binding region EFhand_Ca_insen PF08726.10 ORF126032 - 0.00016 21.7 0.1 0.0013 18.8 0.0 2.4 2 0 0 2 2 2 1 Ca2+ insensitive EF hand Kdo PF06293.14 ORF126032 - 0.002 17.5 0.0 0.0044 16.4 0.0 1.6 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF126032 - 0.0054 16.7 0.0 0.01 15.8 0.0 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_4 PF12763.7 ORF126032 - 0.006 16.5 0.3 0.03 14.3 0.3 2.2 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand Kinase-like PF14531.6 ORF126032 - 0.012 14.9 0.0 0.37 10.1 0.0 2.6 1 1 0 2 2 2 0 Kinase-like Caleosin PF05042.13 ORF126032 - 0.049 13.6 0.5 4.9 7.1 0.2 2.9 2 2 1 3 3 3 0 Caleosin related protein MutS_III PF05192.18 ORF126032 - 0.57 10.4 4.8 2.4 8.3 1.6 2.4 1 1 1 2 2 2 0 MutS domain III CPSF_A PF03178.15 ORF93086 - 2.1e-76 257.3 0.0 2.5e-76 257.0 0.0 1.1 1 0 0 1 1 1 1 CPSF A subunit region PhaC_N PF07167.13 ORF93086 - 0.013 15.2 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Copine PF07002.16 ORF91627 - 1.9e-66 223.7 0.0 2.7e-66 223.1 0.0 1.2 1 0 0 1 1 1 1 Copine C2 PF00168.30 ORF91627 - 3.9e-18 65.7 0.2 7.9e-13 48.6 0.0 2.5 2 0 0 2 2 2 2 C2 domain vWA-TerF-like PF10138.9 ORF91627 - 9.1e-07 29.2 0.0 1.6e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 vWA found in TerF C terminus VWA_3 PF13768.6 ORF91627 - 0.057 13.4 0.0 2.3 8.1 0.0 2.4 2 0 0 2 2 2 0 von Willebrand factor type A domain Pet127 PF08634.10 ORF86573 - 4.7e-81 272.2 0.2 6e-81 271.9 0.2 1.1 1 0 0 1 1 1 1 Mitochondrial protein Pet127 DUF3626 PF12294.8 ORF802 - 7.8e-21 74.4 1.3 5.7e-20 71.6 0.7 2.3 2 1 0 2 2 2 1 Protein of unknown function (DUF3626) EF-hand_6 PF13405.6 ORF802 - 3e-07 29.8 0.1 0.0068 16.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF802 - 4.2e-06 25.9 0.0 0.091 12.3 0.0 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF802 - 5.4e-06 26.8 0.0 1.9e-05 25.0 0.0 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF802 - 7.3e-05 22.1 0.5 0.38 10.3 0.0 2.9 3 0 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF802 - 0.00057 20.2 0.0 0.0018 18.6 0.0 1.9 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF802 - 0.013 15.3 0.2 17 5.3 0.0 3.5 3 1 0 3 3 3 0 EF-hand domain pair RNA_pol_N PF01194.17 ORF802 - 0.18 12.1 0.1 0.68 10.3 0.0 2.1 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit Ank_2 PF12796.7 ORF37425 - 1.2e-16 61.0 0.0 6.2e-09 36.3 0.0 2.7 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF37425 - 2.1e-12 47.0 0.3 1.1e-06 28.8 0.0 3.5 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF37425 - 1e-11 43.9 0.0 0.0051 17.2 0.0 3.8 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF37425 - 1.8e-11 44.3 0.0 3e-07 30.8 0.0 3.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF37425 - 9.3e-10 38.5 0.0 0.05 14.1 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat FYVE PF01363.21 ORF37425 - 0.00048 20.2 9.8 0.00098 19.2 9.8 1.5 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF37425 - 0.0047 17.1 6.4 0.0047 17.1 6.4 2.3 2 1 0 2 2 2 1 FYVE-type zinc finger PARP PF00644.20 ORF29798 - 6.7e-10 38.9 0.0 1.3e-09 37.9 0.0 1.5 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain WWE PF02825.20 ORF29798 - 8.3e-06 26.3 0.0 2.1e-05 25.0 0.0 1.7 1 0 0 1 1 1 1 WWE domain Copine PF07002.16 ORF28122 - 1.9e-66 223.7 0.0 2.7e-66 223.1 0.0 1.2 1 0 0 1 1 1 1 Copine C2 PF00168.30 ORF28122 - 3.9e-18 65.7 0.2 7.9e-13 48.6 0.0 2.5 2 0 0 2 2 2 2 C2 domain vWA-TerF-like PF10138.9 ORF28122 - 9.1e-07 29.2 0.0 1.6e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 vWA found in TerF C terminus VWA_3 PF13768.6 ORF28122 - 0.057 13.4 0.0 2.3 8.1 0.0 2.4 2 0 0 2 2 2 0 von Willebrand factor type A domain PPR_2 PF13041.6 ORF16159 - 8.8e-66 217.9 16.9 3.6e-16 59.1 1.6 9.2 6 3 5 11 11 10 8 PPR repeat family PPR PF01535.20 ORF16159 - 1.1e-49 163.3 9.8 3.8e-09 36.2 0.0 10.8 11 0 0 11 11 11 6 PPR repeat PPR_1 PF12854.7 ORF16159 - 5.3e-48 160.4 1.7 2.9e-13 49.3 0.0 9.7 10 0 0 10 10 10 6 PPR repeat PPR_3 PF13812.6 ORF16159 - 2e-45 152.7 4.4 5.2e-09 36.1 0.0 7.0 5 2 2 7 7 7 5 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF16159 - 2.1e-27 95.9 0.8 1e-10 41.3 0.1 4.2 2 1 2 4 4 4 4 Pentacotripeptide-repeat region of PRORP ATP13 PF12921.7 ORF16159 - 6e-07 29.3 0.1 0.79 9.6 0.0 5.0 1 1 3 5 5 5 3 Mitochondrial ATPase expression ANAPC3 PF12895.7 ORF16159 - 6e-05 23.2 0.1 0.15 12.3 0.1 3.0 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 ORF16159 - 0.00015 22.2 0.5 1.1 9.9 0.0 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF16159 - 0.00016 22.2 0.7 4.1 8.5 0.0 5.4 4 1 2 6 6 5 1 Tetratricopeptide repeat MRP-S27 PF10037.9 ORF16159 - 0.0054 15.7 0.3 0.33 9.8 0.0 2.9 1 1 2 4 4 4 3 Mitochondrial 28S ribosomal protein S27 TPR_7 PF13176.6 ORF16159 - 0.026 14.5 0.1 1 9.6 0.0 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat pEK499_p136 PF18736.1 ORF16159 - 0.044 13.4 0.1 0.17 11.5 0.1 1.9 2 0 0 2 2 2 0 HEPN pEK499 p136 TPR_2 PF07719.17 ORF16159 - 0.05 13.7 0.9 8.8 6.7 0.1 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat BTAD PF03704.17 ORF16159 - 0.052 14.0 0.2 0.51 10.8 0.0 2.8 4 0 0 4 4 3 0 Bacterial transcriptional activator domain Vps23_core PF09454.10 ORF16159 - 0.086 12.8 0.4 36 4.4 0.1 3.3 3 0 0 3 3 3 0 Vps23 core domain Death_2 PF14786.6 ORF16159 - 0.13 12.2 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 Tube Death domain Cyclin_N PF00134.23 ORF149749 - 2.4e-48 163.1 8.3 3e-47 159.5 2.1 2.5 2 0 0 2 2 2 2 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF149749 - 6.9e-28 97.1 2.4 2e-27 95.6 2.4 1.8 1 0 0 1 1 1 1 Cyclin, C-terminal domain DUF2756 PF10956.8 ORF149749 - 4.5 7.8 8.7 7.5 7.1 0.1 3.0 1 1 1 3 3 3 0 Protein of unknown function (DUF2756) PIP5K PF01504.18 ORF149551 - 3.6e-62 210.1 6.2 4.9e-62 209.6 6.2 1.1 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase DUF382 PF04037.13 ORF149551 - 0.014 15.6 0.1 0.029 14.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF382) GYF PF02213.16 ORF142191 - 2.7e-06 27.0 1.6 5.4e-06 26.0 1.6 1.5 1 0 0 1 1 1 1 GYF domain Voldacs PF03517.13 ORF142191 - 6.6 6.8 9.4 2.3 8.3 6.1 2.0 1 1 0 1 1 1 0 Regulator of volume decrease after cellular swelling Ank_2 PF12796.7 ORF141019 - 1.2e-16 61.0 0.0 6.2e-09 36.3 0.0 2.6 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF141019 - 2e-12 47.0 0.3 1.1e-06 28.8 0.0 3.5 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF141019 - 1e-11 43.9 0.0 0.0051 17.2 0.0 3.8 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF141019 - 1.8e-11 44.3 0.0 3e-07 30.8 0.0 3.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF141019 - 9.3e-10 38.5 0.0 0.05 14.1 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeat FYVE PF01363.21 ORF141019 - 0.00048 20.2 9.8 0.00098 19.2 9.8 1.5 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF141019 - 0.0047 17.1 6.4 0.0047 17.1 6.4 2.3 2 1 0 2 2 2 1 FYVE-type zinc finger DUF4440 PF14534.6 ORF136672 - 6.7e-11 42.5 0.1 0.0078 16.6 0.0 3.7 3 0 0 3 3 3 3 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF136672 - 1.5e-09 38.4 3.2 0.044 14.4 0.0 4.9 3 2 2 5 5 5 3 SnoaL-like domain SnoaL_4 PF13577.6 ORF136672 - 5e-06 26.7 0.1 1.2 9.3 0.0 3.5 3 0 0 3 3 3 2 SnoaL-like domain OB_NTP_bind PF07717.16 ORF136672 - 5.7e-05 23.4 1.0 4.3 7.8 0.0 4.0 4 0 0 4 4 4 2 Oligonucleotide/oligosaccharide-binding (OB)-fold CSD PF00313.22 ORF136672 - 0.00086 19.1 5.9 4.9 7.1 0.1 4.2 4 0 0 4 4 4 2 'Cold-shock' DNA-binding domain Polyketide_cyc2 PF10604.9 ORF136672 - 0.0063 16.8 2.2 12 6.1 0.0 4.8 4 2 1 5 5 5 1 Polyketide cyclase / dehydrase and lipid transport OLF PF02191.16 ORF136672 - 0.021 14.4 1.9 9.7 5.6 0.0 3.7 4 0 0 4 4 4 0 Olfactomedin-like domain Mustang PF15682.5 ORF136672 - 0.087 12.9 0.0 33 4.7 0.0 3.2 3 0 0 3 3 3 0 Musculoskeletal, temporally activated-embryonic nuclear protein 1 bMG5 PF17972.1 ORF136672 - 0.091 13.1 0.0 8.8 6.7 0.0 3.5 4 0 0 4 4 4 0 Bacterial Alpha-2-macroglobulin MG5 domain PE_PPE_C PF12484.8 ORF136672 - 1.7 9.6 14.2 1.5 9.8 3.5 3.4 3 0 0 3 3 3 0 Polymorphic PE/PPE proteins C terminal MccV PF17508.2 ORF136672 - 1.9 9.1 8.6 16 6.1 0.1 3.5 3 0 0 3 3 3 0 Microcin V bacteriocin Peptidase_M75 PF09375.10 ORF136672 - 3.8 6.9 12.6 8.7 5.7 3.2 3.0 3 0 0 3 3 3 0 Imelysin GBP_PSP PF02425.15 ORF136672 - 5.3 6.8 9.6 57 3.5 0.0 4.4 4 0 0 4 4 4 0 Paralytic/GBP/PSP peptide # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks16.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks16.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks16.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks16.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GldM_N PF12081.8 NODE_44046_length_452_cov_55736.719424_g36333_i0reverse_frame_3 - 0.0052 16.9 0.1 0.0082 16.2 0.1 1.3 1 0 0 1 1 1 1 GldM N-terminal domain LCE6A PF15858.5 NODE_44046_length_452_cov_55736.719424_g36333_i0reverse_frame_3 - 0.014 16.1 3.2 0.03 15.1 1.7 2.2 3 0 0 3 3 3 0 Late cornified envelope protein 6A family LCE6A PF15858.5 NODE_44046_length_452_cov_55736.719424_g36333_i0forward_frame_3 - 0.12 13.1 2.9 0.25 12.1 2.9 1.5 1 0 0 1 1 1 0 Late cornified envelope protein 6A family Acyl-CoA_dh_C PF12806.7 NODE_44046_length_452_cov_55736.719424_g36333_i0forward_frame_2 - 0.064 13.4 0.1 0.11 12.6 0.1 1.4 1 0 0 1 1 1 0 Acetyl-CoA dehydrogenase C-terminal like ISP1_C PF18161.1 NODE_44045_length_453_cov_1.555024_g36332_i0reverse_frame_2 - 0.081 12.9 0.0 0.26 11.3 0.0 1.8 2 0 0 2 2 2 0 ISP1 C-terminal ISP3_C PF18045.1 NODE_44045_length_453_cov_1.555024_g36332_i0reverse_frame_2 - 0.17 11.8 0.0 0.85 9.5 0.0 1.9 2 0 0 2 2 2 0 ISP3 C-terminal Exotox-A_bind PF09101.10 NODE_44025_length_453_cov_6.074163_g36312_i0reverse_frame_3 - 0.0068 15.8 0.0 0.0078 15.6 0.0 1.1 1 0 0 1 1 1 1 Exotoxin A binding DUF5509 PF17625.2 NODE_44021_length_453_cov_43.205742_g36308_i0forward_frame_3 - 0.0094 15.1 1.9 0.0091 15.2 1.9 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5509) GPHH PF16905.5 NODE_44021_length_453_cov_43.205742_g36308_i0forward_frame_3 - 0.15 11.9 0.1 0.26 11.1 0.1 1.4 1 0 0 1 1 1 0 Voltage-dependent L-type calcium channel, IQ-associated Fn3-like PF14310.6 NODE_44017_length_453_cov_62.715311_g36304_i0forward_frame_3 - 0.0006 19.9 0.0 0.00092 19.3 0.0 1.3 1 0 0 1 1 1 1 Fibronectin type III-like domain RCC1 PF00415.18 NODE_44014_length_453_cov_76.775120_g36302_i0forward_frame_3 - 3.4e-25 88.4 0.0 5e-13 49.5 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_44014_length_453_cov_76.775120_g36302_i0forward_frame_3 - 2.6e-12 46.2 5.7 6.3e-11 41.8 0.7 2.6 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat FKBP_C PF00254.28 NODE_44011_length_453_cov_77.600478_g36299_i0forward_frame_2 - 3.1e-33 113.9 0.0 4.7e-33 113.4 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase ERGIC_N PF13850.6 NODE_44009_length_453_cov_83.102871_g36297_i0forward_frame_3 - 0.0075 16.6 0.1 0.011 16.1 0.1 1.3 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Sh_2 PF17512.2 NODE_44009_length_453_cov_83.102871_g36297_i0forward_frame_3 - 0.0078 16.0 0.6 0.0099 15.7 0.6 1.1 1 0 0 1 1 1 1 Metapneumovirus Small hydrophobic protein LacY_symp PF01306.19 NODE_44007_length_453_cov_84.215311_g36295_i0reverse_frame_2 - 0.12 11.2 0.3 0.13 11.0 0.3 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter TBCA PF02970.16 NODE_44007_length_453_cov_84.215311_g36295_i0forward_frame_3 - 3.1e-14 53.1 3.1 4.1e-14 52.7 1.6 1.8 1 1 1 2 2 2 1 Tubulin binding cofactor A NYN PF01936.18 NODE_44001_length_453_cov_89.016746_g36289_i0reverse_frame_2 - 0.0029 18.1 0.0 0.0047 17.4 0.0 1.3 1 0 0 1 1 1 1 NYN domain PSDC PF12588.8 NODE_43998_length_453_cov_91.435407_g36286_i0reverse_frame_3 - 0.18 11.7 0.0 0.27 11.2 0.0 1.3 1 0 0 1 1 1 0 Phophatidylserine decarboxylase DSPc PF00782.20 NODE_43997_length_453_cov_92.069378_g36285_i0forward_frame_2 - 1.1e-11 44.7 0.0 1.5e-11 44.2 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Init_tRNA_PT PF04179.12 NODE_43997_length_453_cov_92.069378_g36285_i0forward_frame_2 - 0.00037 20.8 0.0 0.0006 20.1 0.0 1.4 1 0 0 1 1 1 1 Rit1 DUSP-like domain Y_phosphatase PF00102.27 NODE_43997_length_453_cov_92.069378_g36285_i0forward_frame_2 - 0.043 13.4 0.0 0.054 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Tail_spike_N PF18668.1 NODE_43988_length_453_cov_132.114833_g36276_i0forward_frame_2 - 0.018 14.9 0.0 0.041 13.8 0.0 1.6 1 0 0 1 1 1 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain DUF1180 PF06679.12 NODE_43988_length_453_cov_132.114833_g36276_i0forward_frame_2 - 0.044 14.2 0.8 0.058 13.8 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) FNIP_N PF14636.6 NODE_43988_length_453_cov_132.114833_g36276_i0forward_frame_2 - 0.35 11.8 5.4 0.5 11.3 5.4 1.3 1 0 0 1 1 1 0 Folliculin-interacting protein N-terminus Protamine_P2 PF00841.19 NODE_43986_length_453_cov_143.741627_g36274_i0reverse_frame_3 - 0.18 12.3 11.5 0.31 11.5 4.7 2.2 2 0 0 2 2 2 0 Sperm histone P2 DUF3365 PF11845.8 NODE_43986_length_453_cov_143.741627_g36274_i0forward_frame_2 - 0.18 12.1 0.1 0.22 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3365) CmcI PF04989.12 NODE_43984_length_453_cov_157.466507_g36272_i0reverse_frame_3 - 6.5e-24 84.8 0.0 1.2e-22 80.6 0.0 2.0 1 1 0 1 1 1 1 Cephalosporin hydroxylase Methyltransf_24 PF13578.6 NODE_43984_length_453_cov_157.466507_g36272_i0reverse_frame_3 - 0.0039 18.2 0.0 0.0053 17.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain DUF4350 PF14258.6 NODE_43984_length_453_cov_157.466507_g36272_i0reverse_frame_3 - 0.094 13.2 0.0 0.18 12.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) Pterin_4a PF01329.19 NODE_43984_length_453_cov_157.466507_g36272_i0reverse_frame_3 - 0.12 12.6 0.2 0.23 11.7 0.2 1.5 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase Acetyltransf_10 PF13673.7 NODE_43977_length_453_cov_259.562201_g36265_i0forward_frame_2 - 5.5e-12 45.7 0.0 9.4e-12 45.0 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_43977_length_453_cov_259.562201_g36265_i0forward_frame_2 - 5.5e-11 42.7 0.0 6.2e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 NODE_43977_length_453_cov_259.562201_g36265_i0forward_frame_2 - 8.2e-10 39.0 0.0 1.8e-09 37.9 0.0 1.5 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_43977_length_453_cov_259.562201_g36265_i0forward_frame_2 - 5.1e-08 32.8 0.0 1.2e-07 31.5 0.0 1.6 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 NODE_43977_length_453_cov_259.562201_g36265_i0forward_frame_2 - 0.15 12.2 0.0 0.24 11.5 0.0 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Exc PF07825.11 ORF99377 - 0.32 11.0 6.2 0.17 11.9 2.6 2.3 3 0 0 3 3 3 0 Excisionase-like protein HMG_box PF00505.19 ORF96976 - 6.3e-17 61.8 5.9 1.2e-16 60.9 5.9 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF96976 - 2.8e-12 47.1 4.0 5.5e-12 46.1 4.0 1.5 1 0 0 1 1 1 1 HMG-box domain Ofd1_CTDD PF10637.9 ORF96976 - 0.014 14.8 3.9 0.13 11.6 2.4 2.0 1 1 1 2 2 2 0 Oxoglutarate and iron-dependent oxygenase degradation C-term ArAE_1 PF06081.11 ORF95708 - 0.062 13.4 2.5 0.082 13.0 2.5 1.2 1 0 0 1 1 1 0 Aromatic acid exporter family member 1 DUF2956 PF11169.8 ORF93543 - 0.02 15.1 1.0 0.036 14.3 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2956) DUF2070 PF09843.9 ORF93522 - 2.6 6.2 9.1 3.2 5.9 9.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2070 PF09843.9 ORF9091 - 2.6 6.2 9.1 3.2 5.9 9.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF760 PF05542.11 ORF89965 - 0.00017 21.9 0.1 0.052 13.9 0.2 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF760) DUF4936 PF16290.5 ORF89965 - 0.16 12.7 2.0 5 7.9 0.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4936) YEATS PF03366.16 ORF89511 - 1.2e-18 66.9 1.3 1.7e-18 66.3 1.3 1.2 1 0 0 1 1 1 1 YEATS family Caudo_TAP PF02413.17 ORF88662 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK Ank_2 PF12796.7 ORF88657 - 5.5e-08 33.3 0.0 2.2e-07 31.4 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF88657 - 3.2e-05 24.4 0.3 0.00019 21.9 0.0 2.3 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF88657 - 0.00022 21.5 0.4 0.0011 19.2 0.0 2.3 2 2 1 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF88657 - 0.00023 21.5 1.2 0.00073 19.9 0.0 2.5 4 1 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF88657 - 0.00055 20.2 0.0 0.046 14.3 0.0 3.5 4 0 0 4 4 4 1 Ankyrin repeat Cytochrome_P460 PF16694.5 ORF88657 - 0.13 12.6 2.3 0.21 11.9 2.3 1.3 1 0 0 1 1 1 0 Cytochrome P460 RasGAP_C PF03836.15 ORF85593 - 0.023 14.9 0.0 0.035 14.2 0.0 1.4 1 1 0 1 1 1 0 RasGAP C-terminus YkyA PF10368.9 ORF85593 - 0.038 13.7 5.4 0.065 12.9 5.3 1.3 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein EST1 PF10374.9 ORF85593 - 0.041 14.5 0.3 0.049 14.3 0.3 1.1 1 0 0 1 1 1 0 Telomerase activating protein Est1 PMEI PF04043.15 ORF85593 - 0.042 14.2 0.7 0.055 13.8 0.7 1.2 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor RmuC PF02646.16 ORF85593 - 0.05 12.7 2.3 0.068 12.3 2.3 1.1 1 0 0 1 1 1 0 RmuC family DUF2229 PF09989.9 ORF85593 - 0.29 10.7 1.5 0.36 10.5 1.5 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) zf-CCCH PF00642.24 ORF84347 - 7.4e-07 28.9 1.1 1.6e-06 27.9 1.1 1.6 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) DUF3679 PF12438.8 ORF84347 - 0.025 14.3 0.3 0.066 12.9 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3679) zf_CCCH_4 PF18345.1 ORF84347 - 0.042 13.9 0.6 0.085 12.9 0.6 1.5 1 0 0 1 1 1 0 Zinc finger domain DHHC PF01529.20 ORF83288 - 2.4e-26 92.5 10.1 2.4e-26 92.5 10.1 1.4 2 0 0 2 2 2 1 DHHC palmitoyltransferase zf-AN1 PF01428.16 ORF83208 - 8.7e-10 38.6 11.5 8.7e-10 38.6 11.5 2.5 2 1 0 2 2 2 1 AN1-like Zinc finger zf-A20 PF01754.16 ORF83208 - 4.7e-06 26.4 2.9 4.7e-06 26.4 2.9 3.0 4 0 0 4 4 4 1 A20-like zinc finger RPAP2_Rtr1 PF04181.13 ORF83208 - 0.049 13.9 0.5 0.049 13.9 0.5 2.3 2 1 0 2 2 2 0 Rtr1/RPAP2 family tRNA-synt_1g PF09334.11 ORF83208 - 0.13 11.0 2.4 0.17 10.6 2.4 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-RING_5 PF14634.6 ORF83208 - 9.9 6.2 17.7 5.3 7.1 0.1 3.3 3 1 0 3 3 3 0 zinc-RING finger domain COPI_assoc PF08507.10 ORF80423 - 4.6e-15 55.8 4.4 4.9e-15 55.7 4.4 1.0 1 0 0 1 1 1 1 COPI associated protein DUF1404 PF07185.11 ORF80423 - 0.0098 15.6 8.5 0.013 15.2 8.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1404) ATP-gua_Ptrans PF00217.19 ORF79370 - 0.0013 18.3 0.0 0.0016 17.9 0.0 1.1 1 0 0 1 1 1 1 ATP:guanido phosphotransferase, C-terminal catalytic domain Dpy-30 PF05186.13 ORF79370 - 0.066 12.9 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Dpy-30 motif Peptidase_S13 PF02113.15 ORF79370 - 0.13 11.0 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 D-Ala-D-Ala carboxypeptidase 3 (S13) family eIF-5a PF01287.20 ORF7855 - 7.3e-14 51.6 0.3 1e-13 51.1 0.3 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 ORF7855 - 0.0017 18.3 0.1 0.0029 17.6 0.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain DUF4026 PF13218.6 ORF7855 - 0.053 12.5 0.0 0.066 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4026) DUF1894 PF08979.11 ORF7855 - 0.13 12.6 0.5 0.32 11.4 0.2 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF1894) DUF2070 PF09843.9 ORF78025 - 2.6 6.2 9.1 3.2 5.9 9.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FAM101 PF15068.6 ORF77855 - 0.02 14.9 0.3 0.058 13.4 0.0 1.7 2 0 0 2 2 2 0 FAM101 family PapG_C PF03628.13 ORF76062 - 0.13 12.2 1.7 11 5.9 0.1 2.2 2 0 0 2 2 2 0 PapG chaperone-binding domain ArAE_1 PF06081.11 ORF75981 - 0.062 13.4 2.5 0.082 13.0 2.5 1.2 1 0 0 1 1 1 0 Aromatic acid exporter family member 1 TBP PF00352.21 ORF74548 - 1.5e-34 117.8 1.0 1.3e-24 85.9 0.1 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 ORF74548 - 0.019 15.1 0.0 0.038 14.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3378) Reoviridae_Vp9 PF08978.10 ORF74377 - 0.081 12.1 0.2 0.12 11.5 0.2 1.3 1 0 0 1 1 1 0 Reoviridae VP9 Mu-like_Pro PF10123.9 ORF72762 - 0.23 11.0 0.0 0.44 10.0 0.0 1.5 2 0 0 2 2 2 0 Mu-like prophage I protein MNNL PF07657.13 ORF72762 - 2.9 8.0 8.3 1.8 8.6 0.3 2.2 2 0 0 2 2 2 0 N terminus of Notch ligand eIF-5a PF01287.20 ORF72349 - 1.3e-12 47.7 0.0 2.1e-12 46.9 0.0 1.4 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold LPAM_2 PF13627.6 ORF71859 - 0.97 9.4 3.7 13 5.8 0.0 3.3 3 0 0 3 3 3 0 Prokaryotic lipoprotein-attachment site Ctr PF04145.15 ORF71142 - 2.7e-13 50.8 22.0 1.7e-07 32.0 16.2 2.1 1 1 1 2 2 2 2 Ctr copper transporter family DUF2070 PF09843.9 ORF71142 - 0.54 8.5 6.7 0.59 8.4 6.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Fer2 PF00111.27 ORF70409 - 0.2 11.7 0.3 0.2 11.7 0.3 2.2 1 1 1 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain AC_N PF16214.5 ORF70409 - 0.41 9.7 8.3 0.64 9.1 8.3 1.3 1 1 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Enterotoxin_HS1 PF08090.11 ORF70409 - 8.3 6.5 8.4 1.2 9.2 2.9 2.4 2 1 0 2 2 2 0 Heat stable E.coli enterotoxin 1 Spc24 PF08286.11 ORF69746 - 4 7.7 18.5 21 5.4 4.4 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 BST2 PF16716.5 ORF69746 - 9.1 6.9 17.3 0.34 11.5 9.9 2.1 1 1 0 2 2 2 0 Bone marrow stromal antigen 2 PIG-U PF06728.13 ORF68781 - 5.7e-09 35.5 13.4 6.3e-09 35.4 13.4 1.0 1 0 0 1 1 1 1 GPI transamidase subunit PIG-U 7TM-7TMR_HD PF07698.11 ORF68781 - 0.0004 20.2 7.9 0.00066 19.5 7.9 1.3 1 0 0 1 1 1 1 7TM receptor with intracellular HD hydrolase Acyl_transf_3 PF01757.22 ORF67625 - 0.025 13.6 2.2 0.031 13.4 2.2 1.1 1 0 0 1 1 1 0 Acyltransferase family DUF418 PF04235.12 ORF67625 - 0.11 12.4 3.0 0.13 12.2 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF418) Staphostatin_A PF09022.10 ORF67551 - 0.0032 17.4 0.1 0.0042 17.0 0.1 1.4 1 0 0 1 1 1 1 Staphostatin A Rhomboid_N PF12122.8 ORF67551 - 0.022 14.9 0.0 0.062 13.5 0.0 1.8 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease FF PF01846.19 ORF67551 - 0.035 14.3 0.0 0.067 13.4 0.0 1.5 1 0 0 1 1 1 0 FF domain zf-3CxxC PF13695.6 ORF67265 - 0.0011 19.4 1.2 0.0014 19.0 1.2 1.2 1 0 0 1 1 1 1 Zinc-binding domain DUF2572 PF10833.8 ORF66721 - 0.14 11.9 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2572) PAN_4 PF14295.6 ORF66721 - 0.4 10.6 4.9 0.54 10.2 0.3 2.5 2 0 0 2 2 2 0 PAN domain PseudoU_synth_1 PF01416.20 ORF66231 - 3.7e-09 37.0 0.0 5.6e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 tRNA pseudouridine synthase UPF0242 PF06785.11 ORF66231 - 0.029 14.5 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2070 PF09843.9 ORF65427 - 2.6 6.2 9.1 3.2 5.9 9.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) CAP-ZIP_m PF15255.6 ORF64437 - 0.076 13.3 0.4 0.1 12.8 0.4 1.2 1 0 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region Bul1_C PF04426.12 ORF62992 - 0.071 12.5 3.6 0.085 12.2 3.6 1.2 1 0 0 1 1 1 0 Bul1 C terminus Mito_carr PF00153.27 ORF62480 - 4.6e-17 61.7 1.8 3.1e-13 49.4 0.5 2.3 2 1 0 2 2 2 2 Mitochondrial carrier protein FOXP-CC PF16159.5 ORF62219 - 0.042 14.5 3.2 0.63 10.7 0.3 2.5 2 0 0 2 2 2 0 FOXP coiled-coil domain Ank_4 PF13637.6 ORF60416 - 5.5e-07 30.0 0.0 0.0021 18.6 0.0 2.7 2 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF60416 - 1.7e-06 28.2 0.0 1.3e-05 25.4 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF60416 - 2.3e-05 24.9 0.0 0.00012 22.6 0.0 2.0 2 1 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF60416 - 0.00027 21.1 0.3 0.21 12.3 0.0 3.3 3 0 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF60416 - 0.0028 18.0 0.6 0.36 11.3 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat BrnA_antitoxin PF14384.6 ORF59853 - 0.03 14.8 0.0 0.054 14.0 0.0 1.4 1 0 0 1 1 1 0 BrnA antitoxin of type II toxin-antitoxin system zf-AN1 PF01428.16 ORF56864 - 8.7e-10 38.6 11.5 8.7e-10 38.6 11.5 2.5 2 1 0 2 2 2 1 AN1-like Zinc finger zf-A20 PF01754.16 ORF56864 - 4.7e-06 26.4 2.9 4.7e-06 26.4 2.9 3.0 4 0 0 4 4 4 1 A20-like zinc finger RPAP2_Rtr1 PF04181.13 ORF56864 - 0.049 13.9 0.5 0.049 13.9 0.5 2.3 2 1 0 2 2 2 0 Rtr1/RPAP2 family tRNA-synt_1g PF09334.11 ORF56864 - 0.13 11.0 2.4 0.17 10.6 2.4 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-RING_5 PF14634.6 ORF56864 - 9.9 6.2 17.7 5.3 7.1 0.1 3.3 3 1 0 3 3 3 0 zinc-RING finger domain DUF1086 PF06461.11 ORF54214 - 0.091 12.6 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1086) SH3_16 PF18348.1 ORF49981 - 0.056 13.3 0.0 2.8 7.8 0.0 2.3 2 0 0 2 2 2 0 Bacterial dipeptidyl-peptidase Sh3 domain Bul1_C PF04426.12 ORF49282 - 0.071 12.5 3.6 0.085 12.2 3.6 1.2 1 0 0 1 1 1 0 Bul1 C terminus zf-C3HC4_3 PF13920.6 ORF49118 - 0.0014 18.4 1.8 0.003 17.4 1.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C2HC5 PF06221.13 ORF49118 - 0.011 15.7 0.5 0.025 14.5 0.5 1.6 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type zinc_ribbon_2 PF13240.6 ORF49118 - 0.031 14.0 1.3 0.07 12.9 1.3 1.7 1 0 0 1 1 1 0 zinc-ribbon domain Prok-RING_4 PF14447.6 ORF49118 - 0.034 14.0 0.8 0.096 12.6 0.8 1.8 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 CIAPIN1 PF05093.13 ORF49118 - 0.043 14.3 3.1 0.062 13.8 3.1 1.4 1 1 0 1 1 1 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis zinc_ribbon_15 PF17032.5 ORF49118 - 0.12 13.1 2.5 0.18 12.6 2.0 1.6 1 1 0 1 1 1 0 zinc-ribbon family zf-C4H2 PF10146.9 ORF49118 - 3.2 8.0 5.0 3.6 7.9 5.0 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein Bul1_C PF04426.12 ORF48994 - 0.071 12.5 3.6 0.085 12.2 3.6 1.2 1 0 0 1 1 1 0 Bul1 C terminus EB1 PF03271.17 ORF48816 - 3.2e-15 56.1 0.6 6.3e-15 55.1 0.6 1.5 1 0 0 1 1 1 1 EB1-like C-terminal motif DUF2070 PF09843.9 ORF48413 - 2.6 6.2 9.1 3.2 5.9 9.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DrsE PF02635.15 ORF46985 - 6.1e-29 100.8 0.0 7.4e-29 100.5 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family zf-AN1 PF01428.16 ORF46001 - 8.7e-10 38.6 11.5 8.7e-10 38.6 11.5 2.5 2 1 0 2 2 2 1 AN1-like Zinc finger zf-A20 PF01754.16 ORF46001 - 4.7e-06 26.4 2.9 4.7e-06 26.4 2.9 3.0 4 0 0 4 4 4 1 A20-like zinc finger RPAP2_Rtr1 PF04181.13 ORF46001 - 0.049 13.9 0.5 0.049 13.9 0.5 2.3 2 1 0 2 2 2 0 Rtr1/RPAP2 family tRNA-synt_1g PF09334.11 ORF46001 - 0.13 11.0 2.4 0.17 10.6 2.4 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-RING_5 PF14634.6 ORF46001 - 9.9 6.2 17.7 5.3 7.1 0.1 3.3 3 1 0 3 3 3 0 zinc-RING finger domain NLBH PF05211.12 ORF43358 - 0.0079 15.8 2.7 0.0079 15.8 2.7 1.7 1 1 0 1 1 1 1 Neuraminyllactose-binding hemagglutinin precursor (NLBH) LPAM_2 PF13627.6 ORF432 - 0.97 9.4 3.7 13 5.8 0.0 3.3 3 0 0 3 3 3 0 Prokaryotic lipoprotein-attachment site QVR PF17064.5 ORF42129 - 0.016 15.4 0.7 0.027 14.7 0.7 1.4 1 1 0 1 1 1 0 Sleepless protein DUF4083 PF13314.6 ORF41198 - 0.088 12.8 0.9 0.15 12.0 0.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Ank_4 PF13637.6 ORF40870 - 6.5e-19 68.1 1.9 1.6e-08 34.9 0.1 2.6 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF40870 - 1.2e-15 57.3 0.6 1.3e-08 34.9 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF40870 - 1.5e-15 57.6 0.9 1.8e-11 44.4 0.1 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF40870 - 2.5e-13 48.9 0.2 2.5e-05 24.3 0.1 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 ORF40870 - 2.1e-09 37.4 0.2 0.002 18.5 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat zf-AN1 PF01428.16 ORF40729 - 8.7e-10 38.6 11.5 8.7e-10 38.6 11.5 2.5 2 1 0 2 2 2 1 AN1-like Zinc finger zf-A20 PF01754.16 ORF40729 - 4.7e-06 26.4 2.9 4.7e-06 26.4 2.9 3.0 4 0 0 4 4 4 1 A20-like zinc finger RPAP2_Rtr1 PF04181.13 ORF40729 - 0.049 13.9 0.5 0.049 13.9 0.5 2.3 2 1 0 2 2 2 0 Rtr1/RPAP2 family tRNA-synt_1g PF09334.11 ORF40729 - 0.13 11.0 2.4 0.17 10.6 2.4 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-RING_5 PF14634.6 ORF40729 - 9.9 6.2 17.7 5.3 7.1 0.1 3.3 3 1 0 3 3 3 0 zinc-RING finger domain TBP PF00352.21 ORF37721 - 1.5e-34 117.8 1.0 1.3e-24 85.9 0.1 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 ORF37721 - 0.019 15.1 0.0 0.038 14.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3378) PHtD_u1 PF16645.5 ORF36294 - 0.37 11.2 2.8 0.52 10.8 1.3 2.3 2 1 0 2 2 2 0 Unstructured region on Pneumococcal histidine triad protein TT_ORF1 PF02956.14 ORF35345 - 0.36 9.5 6.6 0.44 9.2 6.6 1.1 1 0 0 1 1 1 0 TT viral orf 1 MORN PF02493.20 ORF35066 - 1.4e-06 27.9 1.3 3.3e-06 26.7 1.3 1.7 1 0 0 1 1 1 1 MORN repeat Ank_2 PF12796.7 ORF33358 - 5.5e-08 33.3 0.0 2.2e-07 31.4 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF33358 - 3.2e-05 24.4 0.3 0.00019 21.9 0.0 2.3 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF33358 - 0.00022 21.5 0.4 0.0011 19.2 0.0 2.3 2 2 1 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF33358 - 0.00023 21.5 1.2 0.00073 19.9 0.0 2.5 4 1 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF33358 - 0.00055 20.2 0.0 0.046 14.3 0.0 3.5 4 0 0 4 4 4 1 Ankyrin repeat Cytochrome_P460 PF16694.5 ORF33358 - 0.13 12.6 2.3 0.21 11.9 2.3 1.3 1 0 0 1 1 1 0 Cytochrome P460 SRA1 PF07304.11 ORF33290 - 0.087 12.6 0.5 0.12 12.2 0.5 1.1 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) Pox_P21 PF05313.12 ORF31908 - 0.12 11.9 2.2 0.15 11.7 2.2 1.1 1 0 0 1 1 1 0 Poxvirus P21 membrane protein AAA_lid_5 PF17865.1 ORF31355 - 0.23 11.6 0.5 0.32 11.1 0.5 1.2 1 0 0 1 1 1 0 Midasin AAA lid domain NST1 PF13945.6 ORF30837 - 0.39 10.8 1.5 0.54 10.3 1.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator LRS4 PF10422.9 ORF30473 - 0.033 13.8 1.9 0.062 12.9 2.0 1.5 1 1 0 1 1 1 0 Monopolin complex subunit LRS4 Grp7_allergen PF16984.5 ORF29456 - 0.16 12.0 0.1 0.23 11.5 0.1 1.3 1 0 0 1 1 1 0 Group 7 allergen Rft-1 PF04506.13 ORF27506 - 0.099 11.4 4.9 0.36 9.5 3.2 1.9 1 1 1 2 2 2 0 Rft protein DUF3326 PF11805.8 ORF27506 - 6.3 5.6 6.5 13 4.5 0.2 2.7 1 1 1 3 3 3 0 Protein of unknown function (DUF3326) ASC PF00858.24 ORF27345 - 0.0053 15.8 7.1 0.0063 15.5 7.1 1.1 1 0 0 1 1 1 1 Amiloride-sensitive sodium channel DUF4602 PF15375.6 ORF26933 - 0.028 14.7 0.1 0.049 14.0 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4602) HMG_box PF00505.19 ORF24686 - 6.3e-17 61.8 5.9 1.2e-16 60.9 5.9 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF24686 - 2.8e-12 47.1 4.0 5.5e-12 46.1 4.0 1.5 1 0 0 1 1 1 1 HMG-box domain Ofd1_CTDD PF10637.9 ORF24686 - 0.014 14.8 3.9 0.13 11.6 2.4 2.0 1 1 1 2 2 2 0 Oxoglutarate and iron-dependent oxygenase degradation C-term MORN PF02493.20 ORF24474 - 1.6e-19 68.5 29.8 1.6e-05 24.5 1.6 5.7 5 1 0 5 5 5 5 MORN repeat LRS4 PF10422.9 ORF20710 - 0.033 13.8 1.9 0.062 12.9 2.0 1.5 1 1 0 1 1 1 0 Monopolin complex subunit LRS4 KxDL PF10241.9 ORF1995 - 0.07 13.4 2.2 0.14 12.5 2.2 1.6 1 1 0 1 1 1 0 Uncharacterized conserved protein Ank_2 PF12796.7 ORF19876 - 5.5e-08 33.3 0.0 2.2e-07 31.4 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF19876 - 3.2e-05 24.4 0.3 0.00019 21.9 0.0 2.3 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF19876 - 0.00022 21.5 0.4 0.0011 19.2 0.0 2.3 2 2 1 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF19876 - 0.00023 21.5 1.2 0.00073 19.9 0.0 2.5 4 1 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF19876 - 0.00055 20.2 0.0 0.046 14.3 0.0 3.5 4 0 0 4 4 4 1 Ankyrin repeat Cytochrome_P460 PF16694.5 ORF19876 - 0.13 12.6 2.3 0.21 11.9 2.3 1.3 1 0 0 1 1 1 0 Cytochrome P460 Mito_morph_reg PF14972.6 ORF19048 - 0.058 13.0 0.6 0.09 12.4 0.6 1.3 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator zf-AN1 PF01428.16 ORF18776 - 8.7e-10 38.6 11.5 8.7e-10 38.6 11.5 2.5 2 1 0 2 2 2 1 AN1-like Zinc finger zf-A20 PF01754.16 ORF18776 - 4.7e-06 26.4 2.9 4.7e-06 26.4 2.9 3.0 4 0 0 4 4 4 1 A20-like zinc finger RPAP2_Rtr1 PF04181.13 ORF18776 - 0.049 13.9 0.5 0.049 13.9 0.5 2.3 2 1 0 2 2 2 0 Rtr1/RPAP2 family tRNA-synt_1g PF09334.11 ORF18776 - 0.13 11.0 2.4 0.17 10.6 2.4 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-RING_5 PF14634.6 ORF18776 - 9.9 6.2 17.7 5.3 7.1 0.1 3.3 3 1 0 3 3 3 0 zinc-RING finger domain CSD PF00313.22 ORF18320 - 7.3e-18 64.2 0.2 1e-17 63.7 0.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF18320 - 0.027 14.1 0.6 0.049 13.3 0.6 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain Pigment_DH PF06324.11 ORF18022 - 0.28 11.3 0.3 0.28 11.3 0.3 3.2 3 0 0 3 3 3 0 Pigment-dispersing hormone (PDH) Acetyltransf_4 PF13420.7 ORF17206 - 0.15 12.2 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain eIF-5a PF01287.20 ORF152970 - 4e-13 49.2 0.3 6.1e-13 48.7 0.3 1.3 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold DUF4026 PF13218.6 ORF152970 - 0.053 12.5 0.0 0.064 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4026) NST1 PF13945.6 ORF152414 - 0.39 10.8 1.5 0.54 10.3 1.5 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator Pex2_Pex12 PF04757.14 ORF15187 - 0.069 12.7 0.0 0.12 12.0 0.0 1.5 1 1 0 1 1 1 0 Pex2 / Pex12 amino terminal region PHAT PF09246.10 ORF151471 - 0.1 12.4 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 PHAT NEMP PF10225.9 ORF151119 - 0.023 14.3 0.1 0.03 14.0 0.1 1.1 1 0 0 1 1 1 0 NEMP family Mating_C PF12737.7 ORF150243 - 0.13 11.4 7.5 0.27 10.4 0.7 2.6 1 1 2 3 3 3 0 C-terminal domain of homeodomain 1 Transferrin PF00405.17 ORF150084 - 0.014 14.6 1.5 0.014 14.6 0.8 1.2 1 1 0 1 1 1 0 Transferrin eIF-5a PF01287.20 ORF147966 - 1.4e-16 60.4 0.3 1.9e-16 59.9 0.3 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 ORF147966 - 1.2e-05 25.2 0.1 2e-05 24.5 0.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain Ras PF00071.22 ORF147706 - 1.5e-29 102.7 1.3 1.6e-29 102.6 1.3 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF147706 - 6.8e-24 84.4 0.2 8.9e-24 84.0 0.2 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF147706 - 5.1e-14 52.1 0.7 6.1e-14 51.9 0.7 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF147706 - 1.9e-07 30.7 0.3 2.6e-07 30.3 0.3 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF147706 - 2.3e-07 30.9 0.1 3.2e-07 30.4 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF147706 - 2.5e-06 27.0 0.2 3.3e-06 26.7 0.2 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 ORF147706 - 3.4e-05 23.4 0.9 9.4e-05 22.0 0.9 1.7 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF147706 - 5.7e-05 22.7 0.3 0.0047 16.5 0.1 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain TniB PF05621.11 ORF147706 - 0.0013 18.2 0.0 0.002 17.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial TniB protein AAA_15 PF13175.6 ORF147706 - 0.0026 17.6 1.2 0.003 17.3 1.2 1.1 1 0 0 1 1 1 1 AAA ATPase domain G-alpha PF00503.20 ORF147706 - 0.0048 16.1 0.2 0.0092 15.2 0.2 1.6 1 1 0 1 1 1 1 G-protein alpha subunit Dynamin_N PF00350.23 ORF147706 - 0.018 15.1 0.0 0.041 14.0 0.0 1.6 1 0 0 1 1 1 0 Dynamin family AAA_24 PF13479.6 ORF147706 - 0.025 14.3 0.0 0.025 14.3 0.0 1.3 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF147706 - 0.034 13.9 0.2 0.06 13.1 0.1 1.6 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein AAA_14 PF13173.6 ORF147706 - 0.041 13.9 0.3 0.1 12.6 0.3 1.8 1 1 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 ORF147706 - 0.062 13.1 0.2 0.51 10.1 0.1 2.2 1 1 1 2 2 2 0 Ethanolamine utilisation - propanediol utilisation DUF4789 PF16033.5 ORF14691 - 0.5 10.9 5.2 1.8 9.1 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4789) Transferrin PF00405.17 ORF14608 - 0.014 14.6 1.5 0.014 14.6 0.8 1.2 1 1 0 1 1 1 0 Transferrin Bul1_C PF04426.12 ORF145553 - 0.071 12.5 3.6 0.085 12.2 3.6 1.2 1 0 0 1 1 1 0 Bul1 C terminus LPAM_2 PF13627.6 ORF145425 - 0.97 9.4 3.7 13 5.8 0.0 3.3 3 0 0 3 3 3 0 Prokaryotic lipoprotein-attachment site DUF4405 PF14358.6 ORF145075 - 0.067 13.8 0.1 3.5 8.2 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) CPSF100_C PF13299.6 ORF144242 - 2.6 8.2 7.6 0.75 10.0 4.1 1.7 1 1 1 2 2 2 0 Cleavage and polyadenylation factor 2 C-terminal Mito_morph_reg PF14972.6 ORF144115 - 0.058 13.0 0.6 0.09 12.4 0.6 1.3 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator Tam41_Mmp37 PF09139.11 ORF143981 - 1.8e-41 142.7 1.0 2e-41 142.5 1.0 1.0 1 0 0 1 1 1 1 Phosphatidate cytidylyltransferase, mitochondrial DUF2956 PF11169.8 ORF143957 - 0.02 15.1 1.0 0.036 14.3 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2956) DUF2834 PF11196.8 ORF143340 - 0.22 11.9 2.6 0.3 11.4 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2834) SSXT PF05030.12 ORF142978 - 6.8e-05 22.4 0.4 6.8e-05 22.4 0.4 1.8 2 0 0 2 2 2 1 SSXT protein (N-terminal region) DUF2284 PF10050.9 ORF142978 - 0.018 14.8 0.0 0.036 13.8 0.0 1.5 2 0 0 2 2 2 0 Predicted metal-binding protein (DUF2284) YaaC PF14175.6 ORF142978 - 0.061 12.6 2.2 0.063 12.5 2.2 1.0 1 0 0 1 1 1 0 YaaC-like Protein DUF4789 PF16033.5 ORF142547 - 0.5 10.9 5.2 1.8 9.1 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4789) zf-RING_UBOX PF13445.6 ORF141479 - 0.00029 20.8 2.9 0.00029 20.8 2.9 2.0 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_2 PF13639.6 ORF141479 - 0.00066 20.0 3.9 0.00066 20.0 3.9 2.6 2 1 1 3 3 3 1 Ring finger domain zf-C3HC4 PF00097.25 ORF141479 - 0.0018 18.1 1.7 0.0018 18.1 1.7 2.6 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF141479 - 0.0023 17.9 10.1 0.0071 16.3 1.3 3.1 2 1 1 3 3 3 2 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF141479 - 0.0058 16.4 1.1 0.0058 16.4 1.1 2.7 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF141479 - 0.018 14.8 3.3 0.018 14.8 3.3 3.0 3 0 0 3 3 3 0 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF141479 - 0.045 13.6 2.0 0.045 13.6 2.0 2.6 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF141479 - 0.054 13.7 7.6 0.068 13.4 3.8 2.9 2 1 1 3 3 3 0 zinc finger of C3HC4-type, RING PHD_4 PF16866.5 ORF141479 - 3.5 7.8 9.2 28 4.9 4.8 2.7 2 1 0 2 2 2 0 PHD-finger CAF1A PF12253.8 ORF141479 - 8.8 6.6 9.2 16 5.7 9.2 1.4 1 1 0 1 1 1 0 Chromatin assembly factor 1 subunit A DUF3267 PF11667.8 ORF141264 - 0.024 14.9 6.3 0.035 14.4 6.3 1.2 1 0 0 1 1 1 0 Putative zincin peptidase ATP-synt_C PF00137.21 ORF140892 - 7.9e-13 48.6 11.7 7.9e-13 48.6 11.7 2.2 2 0 0 2 2 2 2 ATP synthase subunit C Mur_ligase PF01225.25 ORF140160 - 0.16 12.3 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Mur ligase family, catalytic domain CEND1 PF15677.5 ORF139506 - 0.15 12.6 0.1 1.3 9.6 0.0 1.9 1 1 1 2 2 2 0 Cell cycle exit and neuronal differentiation protein 1 Acetyltransf_4 PF13420.7 ORF139489 - 0.15 12.2 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Phage_holin_5_2 PF16079.5 ORF138760 - 0.13 12.6 2.5 0.27 11.6 2.5 1.5 1 0 0 1 1 1 0 Phage holin family Hol44, in holin superfamily V LapA_dom PF06305.11 ORF138760 - 0.43 10.4 1.8 25 4.8 0.4 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DUF3716 PF12511.8 ORF138495 - 0.054 13.6 2.1 0.054 13.6 2.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3716) zf-LSD1 PF06943.12 ORF137560 - 1e-05 25.2 5.0 1e-05 25.2 5.0 2.3 2 0 0 2 2 2 1 LSD1 zinc finger DZR PF12773.7 ORF137560 - 0.0094 16.0 3.7 0.0094 16.0 3.7 2.0 1 1 1 2 2 2 1 Double zinc ribbon Rpr2 PF04032.16 ORF137560 - 0.05 13.9 6.1 2.3 8.6 1.0 2.3 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF2318 PF10080.9 ORF137560 - 0.14 12.3 5.4 0.21 11.7 5.4 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) zinc_ribbon_12 PF11331.8 ORF137560 - 0.78 9.6 9.1 2.2 8.2 1.4 2.7 2 1 1 3 3 3 0 Probable zinc-ribbon domain Mu-like_Com PF10122.9 ORF137560 - 1.5 8.3 7.3 1.7 8.2 0.2 2.6 2 1 0 2 2 2 0 Mu-like prophage protein Com PhnA_Zn_Ribbon PF08274.12 ORF137560 - 2.7 8.0 7.5 0.2 11.6 1.0 2.4 2 1 1 3 3 3 0 PhnA Zinc-Ribbon YL1_C PF08265.11 ORF13735 - 0.0045 16.7 0.0 0.0075 16.0 0.0 1.4 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain Imm32 PF15566.6 ORF13735 - 0.15 11.9 0.3 0.38 10.6 0.3 1.6 1 0 0 1 1 1 0 Immunity protein 32 Inhibitor_I42 PF09394.10 ORF135418 - 1.2e-13 51.3 0.2 2.3e-13 50.4 0.2 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 zf-AN1 PF01428.16 ORF135278 - 8.7e-10 38.6 11.5 8.7e-10 38.6 11.5 2.5 2 1 0 2 2 2 1 AN1-like Zinc finger zf-A20 PF01754.16 ORF135278 - 4.7e-06 26.4 2.9 4.7e-06 26.4 2.9 3.0 4 0 0 4 4 4 1 A20-like zinc finger RPAP2_Rtr1 PF04181.13 ORF135278 - 0.049 13.9 0.5 0.049 13.9 0.5 2.3 2 1 0 2 2 2 0 Rtr1/RPAP2 family tRNA-synt_1g PF09334.11 ORF135278 - 0.13 11.0 2.4 0.17 10.6 2.4 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-RING_5 PF14634.6 ORF135278 - 9.9 6.2 17.7 5.3 7.1 0.1 3.3 3 1 0 3 3 3 0 zinc-RING finger domain DOMON PF03351.17 ORF134728 - 9.6e-11 42.0 0.0 1.5e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 DOMON domain RasGAP_C PF03836.15 ORF134247 - 0.023 14.9 0.0 0.035 14.2 0.0 1.4 1 1 0 1 1 1 0 RasGAP C-terminus YkyA PF10368.9 ORF134247 - 0.038 13.7 5.4 0.065 12.9 5.3 1.3 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein EST1 PF10374.9 ORF134247 - 0.041 14.5 0.3 0.049 14.3 0.3 1.1 1 0 0 1 1 1 0 Telomerase activating protein Est1 PMEI PF04043.15 ORF134247 - 0.042 14.2 0.7 0.055 13.8 0.7 1.2 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor RmuC PF02646.16 ORF134247 - 0.05 12.7 2.3 0.068 12.3 2.3 1.1 1 0 0 1 1 1 0 RmuC family DUF2229 PF09989.9 ORF134247 - 0.29 10.7 1.5 0.36 10.5 1.5 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) cNMP_binding PF00027.29 ORF132261 - 0.0031 17.5 0.0 0.0057 16.7 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain VIT_2 PF13757.6 ORF132140 - 0.38 10.7 3.1 21 5.1 0.1 3.1 2 1 1 3 3 3 0 Vault protein inter-alpha-trypsin domain GcpE PF04551.14 ORF131646 - 0.0032 16.6 0.0 0.0037 16.4 0.0 1.0 1 0 0 1 1 1 1 GcpE protein NIR_SIR PF01077.22 ORF131646 - 0.014 14.9 0.0 0.018 14.6 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain zf-AN1 PF01428.16 ORF131329 - 8.7e-10 38.6 11.5 8.7e-10 38.6 11.5 2.5 2 1 0 2 2 2 1 AN1-like Zinc finger zf-A20 PF01754.16 ORF131329 - 4.7e-06 26.4 2.9 4.7e-06 26.4 2.9 3.0 4 0 0 4 4 4 1 A20-like zinc finger RPAP2_Rtr1 PF04181.13 ORF131329 - 0.049 13.9 0.5 0.049 13.9 0.5 2.3 2 1 0 2 2 2 0 Rtr1/RPAP2 family tRNA-synt_1g PF09334.11 ORF131329 - 0.13 11.0 2.4 0.17 10.6 2.4 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf-RING_5 PF14634.6 ORF131329 - 9.9 6.2 17.7 5.3 7.1 0.1 3.3 3 1 0 3 3 3 0 zinc-RING finger domain Pkinase PF00069.25 ORF130772 - 4.7e-18 65.5 0.0 5.5e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF130772 - 1.7e-06 27.5 0.0 2.2e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF226 PF02890.14 ORF130750 - 0.013 15.5 0.6 0.016 15.2 0.6 1.3 1 0 0 1 1 1 0 Borrelia family of unknown function DUF226 FANCI_HD1 PF14679.6 ORF130750 - 0.2 11.6 2.0 0.24 11.4 0.3 1.9 2 0 0 2 2 2 0 FANCI helical domain 1 cNMP_binding PF00027.29 ORF130196 - 2.5e-15 56.3 0.0 3.6e-15 55.8 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF2070 PF09843.9 ORF12938 - 2.6 6.2 9.1 3.2 5.9 9.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) GIT_CC PF16559.5 ORF125449 - 0.00031 20.6 1.4 0.0012 18.6 0.5 2.3 2 1 0 2 2 2 1 GIT coiled-coil Rho guanine nucleotide exchange factor TSC22 PF01166.18 ORF125449 - 0.022 15.1 0.9 0.084 13.2 0.9 2.0 1 0 0 1 1 1 0 TSC-22/dip/bun family Streptin-Immun PF11083.8 ORF125449 - 0.034 14.5 4.7 1 9.8 0.7 2.6 2 1 0 2 2 2 0 Lantibiotic streptin immunity protein TMEM192 PF14802.6 ORF125449 - 0.043 12.9 0.8 0.06 12.4 0.8 1.2 1 0 0 1 1 1 0 TMEM192 family bZIP_1 PF00170.21 ORF125449 - 0.57 10.3 4.3 0.25 11.5 0.6 2.3 3 0 0 3 3 3 0 bZIP transcription factor Shugoshin_N PF07558.11 ORF125449 - 5.4 7.0 10.4 3.4 7.6 0.8 3.6 3 1 1 4 4 4 0 Shugoshin N-terminal coiled-coil region ALMS_motif PF15309.6 ORF12498 - 0.044 14.2 0.8 0.06 13.8 0.8 1.2 1 0 0 1 1 1 0 ALMS motif Mating_C PF12737.7 ORF124545 - 1.1 8.4 6.4 1.2 8.3 6.4 1.1 1 0 0 1 1 1 0 C-terminal domain of homeodomain 1 Ribonuc_2-5A PF06479.12 ORF11949 - 0.06 13.5 4.0 0.18 12.0 0.8 2.1 1 1 1 2 2 2 0 Ribonuclease 2-5A DUF2139 PF09910.9 ORF119425 - 0.011 14.9 0.2 0.013 14.7 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2139) Staphostatin_A PF09022.10 ORF118505 - 0.003 17.4 0.1 0.0042 17.0 0.1 1.4 1 0 0 1 1 1 1 Staphostatin A Rhomboid_N PF12122.8 ORF118505 - 0.021 15.0 0.0 0.062 13.5 0.0 1.8 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease FF PF01846.19 ORF118505 - 0.034 14.3 0.0 0.067 13.4 0.0 1.5 1 0 0 1 1 1 0 FF domain LPAM_2 PF13627.6 ORF116869 - 0.97 9.4 3.7 13 5.8 0.0 3.3 3 0 0 3 3 3 0 Prokaryotic lipoprotein-attachment site Mur_ligase PF01225.25 ORF116521 - 0.16 12.3 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Mur ligase family, catalytic domain Dexa_ind PF15198.6 ORF115812 - 0.013 15.6 0.7 0.02 15.0 0.3 1.5 1 1 0 1 1 1 0 Dexamethasone-induced ARL6IP6 PF15062.6 ORF115569 - 0.14 12.3 0.9 0.32 11.1 0.2 1.8 1 1 2 3 3 3 0 Haemopoietic lineage transmembrane helix Transferrin PF00405.17 ORF113849 - 0.014 14.6 1.5 0.014 14.6 0.8 1.2 1 1 0 1 1 1 0 Transferrin LPAM_2 PF13627.6 ORF113756 - 0.97 9.4 3.7 13 5.8 0.0 3.3 3 0 0 3 3 3 0 Prokaryotic lipoprotein-attachment site MORN PF02493.20 ORF112527 - 1.4e-06 27.9 1.3 3.3e-06 26.7 1.3 1.7 1 0 0 1 1 1 1 MORN repeat Mito_morph_reg PF14972.6 ORF112522 - 0.058 13.0 0.6 0.09 12.4 0.6 1.3 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator Mur_ligase PF01225.25 ORF111527 - 0.16 12.3 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Mur ligase family, catalytic domain Abhydrolase_1 PF00561.20 ORF110776 - 2.6e-13 50.2 0.0 3e-13 50.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF110776 - 1.1e-08 34.6 0.0 1.3e-08 34.5 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF110776 - 2e-06 28.6 0.0 2e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 ORF110776 - 0.00067 19.3 0.0 0.00071 19.2 0.0 1.1 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Ndr PF03096.14 ORF110776 - 0.0012 17.6 0.0 0.0014 17.4 0.0 1.1 1 0 0 1 1 1 1 Ndr family Ser_hydrolase PF06821.13 ORF110776 - 0.0051 16.7 0.0 0.0065 16.3 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase DUF915 PF06028.11 ORF110776 - 0.095 12.0 0.1 0.56 9.5 0.0 1.9 1 1 1 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) TP2 PF01254.18 ORF109406 - 5.2 7.7 20.6 9.9 6.8 20.6 1.4 1 0 0 1 1 1 0 Nuclear transition protein 2 RST PF12174.8 ORF108691 - 0.048 13.6 1.6 0.071 13.0 0.5 1.9 2 0 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain DUF1736 PF08409.11 ORF107266 - 0.0046 16.9 1.2 0.0074 16.3 1.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1736) HEV_ORF1 PF02444.16 ORF107046 - 0.038 14.5 2.6 3.8 8.1 0.4 2.2 1 1 1 2 2 2 0 Hepatitis E virus ORF-2 (Putative capsid protein) LCE PF14672.6 ORF106890 - 0.13 12.9 0.2 0.13 12.9 0.2 1.8 1 1 1 2 2 2 0 Late cornified envelope Lambda_CIII PF02061.16 ORF102583 - 0.75 9.9 3.4 0.81 9.8 0.5 2.3 2 1 0 2 2 2 0 Lambda Phage CIII ZapC PF07126.12 NODE_44565_length_445_cov_2.321951_g36822_i0forward_frame_1 - 5.5e-53 179.0 0.1 6.2e-53 178.8 0.1 1.0 1 0 0 1 1 1 1 Cell-division protein ZapC Peptidase_S8 PF00082.22 NODE_44557_length_445_cov_3.000000_g36814_i0reverse_frame_1 - 2.5e-18 66.4 0.3 2.8e-18 66.2 0.3 1.0 1 0 0 1 1 1 1 Subtilase family HTH_Tnp_4 PF13613.6 NODE_44554_length_445_cov_4.970732_g36811_i0forward_frame_1 - 0.0073 16.0 0.1 0.35 10.6 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix of DDE superfamily endonuclease CNV-Replicase_N PF16688.5 NODE_44554_length_445_cov_4.970732_g36811_i0forward_frame_1 - 0.12 12.7 0.0 0.19 12.1 0.0 1.3 1 0 0 1 1 1 0 Replicase polyprotein N-term from Coronavirus nsp1 F-box PF00646.33 NODE_44553_length_445_cov_5.329268_g36810_i0forward_frame_1 - 0.0068 16.3 1.0 0.0068 16.3 1.0 3.3 3 1 1 4 4 4 1 F-box domain HTH_20 PF12840.7 NODE_44553_length_445_cov_5.329268_g36810_i0forward_frame_1 - 0.25 11.4 1.5 6.5 6.9 0.6 2.9 1 1 1 2 2 2 0 Helix-turn-helix domain SNARE_assoc PF09335.11 NODE_44553_length_445_cov_5.329268_g36810_i0forward_frame_1 - 1.6 9.2 6.3 0.82 10.2 1.5 2.1 1 1 1 2 2 2 0 SNARE associated Golgi protein DUF1686 PF07937.11 NODE_44548_length_445_cov_64.643902_g36805_i0forward_frame_1 - 0.16 11.8 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1686) TAP35_44 PF07265.11 NODE_44542_length_445_cov_77.363415_g36799_i0reverse_frame_1 - 0.11 12.5 1.4 0.17 11.9 0.4 1.8 1 1 1 2 2 2 0 Tapetum specific protein TAP35/TAP44 RCC1_2 PF13540.6 NODE_44533_length_445_cov_131.273171_g36790_i0reverse_frame_1 - 0.0097 15.7 0.9 0.0097 15.7 0.9 2.0 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat K_channel_TID PF07941.11 NODE_44533_length_445_cov_131.273171_g36790_i0reverse_frame_1 - 0.67 10.4 5.2 1.8 9.1 0.6 2.2 2 0 0 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain DUF5388 PF17363.2 NODE_44527_length_445_cov_228.578049_g36785_i0reverse_frame_1 - 0.06 13.5 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5388) pXO2-72 PF17443.2 NODE_44520_length_445_cov_310.951220_g36778_i0reverse_frame_1 - 0.023 14.9 0.0 0.049 13.9 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein pXO2-72 DUF5356 PF17309.2 NODE_44520_length_445_cov_310.951220_g36778_i0reverse_frame_1 - 0.034 14.1 0.0 0.065 13.2 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5356) DUF4891 PF16232.5 NODE_44515_length_445_cov_553.197561_g19822_i4forward_frame_1 - 0.042 14.4 0.6 0.53 10.8 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4891) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks170.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks170.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks170.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks170.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:21 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cyclin_N PF00134.23 NODE_44502_length_446_cov_1.540146_g36765_i0reverse_frame_1 - 1.9e-10 40.5 0.0 2.3e-10 40.3 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain DUF4424 PF14415.6 NODE_44499_length_446_cov_1.992701_g36762_i0reverse_frame_1 - 0.17 11.2 0.0 0.21 10.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4424) zf-C2H2_2 PF12756.7 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.0066 16.8 1.3 0.37 11.2 2.7 2.2 1 1 1 2 2 2 1 C2H2 type zinc-finger (2 copies) zf-C2H2_9 PF16293.5 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.0084 15.9 0.0 0.0084 15.9 0.0 1.9 2 0 0 2 2 2 1 C2H2 type zinc-finger (1 copy) zf-C2H2_4 PF13894.6 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.011 16.5 9.2 0.34 11.9 0.2 2.6 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.034 14.6 10.4 0.24 11.9 0.1 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zinc_ribbon_4 PF13717.6 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.072 13.0 1.2 5.2 7.1 0.2 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zf_C2H2_ZHX PF18387.1 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.19 11.4 1.4 11 5.7 0.0 2.3 2 0 0 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zinc_ribbon_5 PF13719.6 NODE_44498_length_446_cov_2.111922_g36761_i0forward_frame_1 - 0.28 11.0 3.7 1.4 8.8 0.5 2.3 2 0 0 2 2 2 0 zinc-ribbon domain bPH_3 PF14470.6 NODE_44488_length_446_cov_2.559611_g36751_i0reverse_frame_1 - 0.077 13.4 0.6 0.29 11.5 0.1 1.9 2 0 0 2 2 2 0 Bacterial PH domain PDDEXK_10 PF07788.11 NODE_44488_length_446_cov_2.559611_g36751_i0reverse_frame_1 - 0.092 12.7 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Ribosomal_S22 PF08136.11 NODE_44488_length_446_cov_2.559611_g36751_i0reverse_frame_1 - 0.098 13.0 0.2 0.27 11.6 0.0 1.8 2 0 0 2 2 2 0 30S ribosomal protein subunit S22 family DNA_ligase_A_M PF01068.21 NODE_44480_length_446_cov_38.978102_g36743_i0forward_frame_1 - 0.027 14.1 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 ATP dependent DNA ligase domain Gemini_BL1 PF00845.19 NODE_44470_length_446_cov_72.080292_g36734_i0reverse_frame_1 - 0.0013 18.4 1.7 0.0015 18.2 1.3 1.3 1 1 0 1 1 1 1 Geminivirus BL1 movement protein DUF2101 PF09874.9 NODE_44470_length_446_cov_72.080292_g36734_i0forward_frame_1 - 6.3 6.5 11.9 8.1 6.1 11.9 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) SAP PF02037.27 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.00088 19.0 0.5 0.0041 16.9 0.0 2.3 2 0 0 2 2 2 1 SAP domain SYCE1 PF15233.6 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.005 16.9 3.6 0.0073 16.4 3.6 1.2 1 0 0 1 1 1 1 Synaptonemal complex central element protein 1 Sec2p PF06428.11 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.016 15.1 4.4 0.016 15.1 4.4 2.1 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p CCDC-167 PF15188.6 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.049 14.0 1.8 0.12 12.7 1.8 1.7 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 APC_N_CC PF16689.5 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.16 12.1 2.3 0.28 11.3 2.3 1.3 1 0 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain FlgN PF05130.12 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.25 11.9 4.3 0.36 11.3 4.3 1.3 1 0 0 1 1 1 0 FlgN protein PV-1 PF06637.11 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_1 - 0.94 8.2 6.7 1.4 7.7 6.7 1.4 1 1 0 1 1 1 0 PV-1 protein (PLVAP) Methyltransf_24 PF13578.6 NODE_44446_length_446_cov_217.705596_g36711_i0forward_frame_1 - 4.9e-05 24.3 0.1 9.2e-05 23.4 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain CmcI PF04989.12 NODE_44446_length_446_cov_217.705596_g36711_i0forward_frame_1 - 0.13 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase BofA PF07441.11 NODE_44435_length_446_cov_2660.233577_g36700_i0reverse_frame_1 - 3.7 7.8 12.2 0.54 10.5 2.4 2.2 2 0 0 2 2 2 0 SigmaK-factor processing regulatory protein BofA AlaDh_PNT_C PF01262.21 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 3.2e-51 173.7 1.3 3.6e-51 173.5 1.3 1.0 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.00021 20.7 0.3 0.11 11.8 0.1 2.1 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.047 13.9 0.9 0.28 11.4 0.7 2.0 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain NAD_binding_2 PF03446.15 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.052 13.7 0.8 0.14 12.3 0.8 1.6 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase ADH_zinc_N PF00107.26 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.068 13.2 0.3 0.11 12.5 0.3 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase Pyr_redox PF00070.27 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.097 13.2 0.6 0.3 11.7 0.2 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 NODE_44421_length_447_cov_2.745146_g36686_i0reverse_frame_1 - 0.11 11.7 1.1 0.11 11.7 1.1 1.3 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF5599 PF18141.1 NODE_44415_length_447_cov_3.473301_g36680_i0reverse_frame_1 - 0.12 12.6 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5599) ArAE_2_N PF10337.9 NODE_44403_length_447_cov_52.859223_g36670_i0reverse_frame_1 - 0.002 17.2 0.6 0.0025 16.9 0.6 1.1 1 0 0 1 1 1 1 Putative ER transporter, 6TM, N-terminal Pkinase PF00069.25 NODE_44356_length_448_cov_2.014528_g36626_i0forward_frame_2 - 4.5e-15 55.7 0.0 6.3e-15 55.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DUF5088 PF17008.5 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_3 - 0.0061 16.3 0.6 0.0092 15.7 0.3 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF5088) Tropomyosin_1 PF12718.7 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.00042 20.5 9.3 0.00056 20.1 9.3 1.2 1 0 0 1 1 1 1 Tropomyosin like Uds1 PF15456.6 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.0071 16.5 4.3 0.012 15.8 4.3 1.3 1 0 0 1 1 1 1 Up-regulated During Septation DHR10 PF18595.1 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.0087 16.1 10.0 0.014 15.5 10.0 1.2 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain DUF724 PF05266.14 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.059 13.2 6.0 0.068 13.0 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Angiomotin_C PF12240.8 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.076 12.6 5.8 0.12 11.9 5.8 1.2 1 0 0 1 1 1 0 Angiomotin C terminal DUF641 PF04859.12 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.68 10.3 7.8 0.88 9.9 7.3 1.5 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) Exonuc_VII_L PF02601.15 NODE_44354_length_448_cov_2.290557_g36624_i0reverse_frame_2 - 0.91 9.0 4.3 1 8.9 4.3 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit CENP-N PF05238.13 NODE_44354_length_448_cov_2.290557_g36624_i0forward_frame_3 - 0.3 10.3 1.7 0.36 10.1 1.7 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like cNMP_binding PF00027.29 NODE_44353_length_448_cov_2.326877_g36623_i0forward_frame_3 - 3.5e-12 46.2 0.0 4.6e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF4051 PF13260.6 NODE_44344_length_448_cov_3.159806_g36614_i0reverse_frame_2 - 0.063 13.0 1.1 0.13 12.0 1.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) ATP-synt_B PF00430.18 NODE_44342_length_448_cov_3.767554_g36612_i0reverse_frame_2 - 0.29 11.2 22.7 0.51 10.4 22.7 1.5 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) DUF883 PF05957.13 NODE_44342_length_448_cov_3.767554_g36612_i0reverse_frame_2 - 1.7 9.3 14.9 1.4 9.6 12.3 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) KAAG1 PF15354.6 NODE_44334_length_448_cov_79.184019_g36604_i0forward_frame_2 - 2.5 8.7 7.4 4.6 7.9 7.1 1.6 1 1 0 1 1 1 0 Kidney-associated antigen 1 BRO1 PF03097.18 NODE_44333_length_448_cov_83.535109_g36603_i0reverse_frame_2 - 0.075 11.8 0.1 0.09 11.6 0.1 1.2 1 0 0 1 1 1 0 BRO1-like domain VPS13 PF16908.5 NODE_44333_length_448_cov_83.535109_g36603_i0forward_frame_3 - 1.2e-24 87.4 0.2 1.4e-24 87.2 0.2 1.1 1 0 0 1 1 1 1 Vacuolar sorting-associated protein 13, N-terminal Lipoprotein_Ltp PF07553.11 NODE_44333_length_448_cov_83.535109_g36603_i0forward_frame_3 - 0.072 13.4 0.4 0.18 12.1 0.4 1.6 1 0 0 1 1 1 0 Host cell surface-exposed lipoprotein Apolipoprotein PF01442.18 NODE_44331_length_448_cov_84.380145_g36601_i0reverse_frame_3 - 1.4e-06 28.3 0.7 1.8e-06 28.0 0.7 1.2 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF4795 PF16043.5 NODE_44331_length_448_cov_84.380145_g36601_i0reverse_frame_3 - 0.00078 19.1 0.9 0.0016 18.1 0.1 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4795) DUF883 PF05957.13 NODE_44331_length_448_cov_84.380145_g36601_i0reverse_frame_3 - 0.008 16.8 1.2 0.034 14.8 0.0 2.4 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF883) YtxH PF12732.7 NODE_44331_length_448_cov_84.380145_g36601_i0reverse_frame_3 - 0.049 14.2 2.8 0.46 11.1 2.8 2.4 1 1 0 1 1 1 0 YtxH-like protein HSBP1 PF06825.12 NODE_44331_length_448_cov_84.380145_g36601_i0reverse_frame_3 - 0.083 12.8 3.4 0.68 9.8 1.2 2.6 1 1 1 2 2 2 0 Heat shock factor binding protein 1 RCC1_2 PF13540.6 NODE_44331_length_448_cov_84.380145_g36601_i0reverse_frame_2 - 0.06 13.2 0.4 0.13 12.1 0.4 1.6 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat DUF1143 PF06608.11 NODE_44327_length_448_cov_93.726392_g36597_i0forward_frame_2 - 0.005 16.9 0.4 0.0084 16.2 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1143) DUF5596 PF18082.1 NODE_44316_length_448_cov_176.309927_g36586_i0reverse_frame_2 - 0.06 13.2 0.6 0.12 12.2 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5596) VAR1 PF05316.12 NODE_44311_length_448_cov_200.249395_g36581_i0forward_frame_3 - 0.004 16.3 0.2 0.0046 16.1 0.2 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal protein (VAR1) zf-C3HC4_2 PF13923.6 NODE_44304_length_448_cov_600.423729_g3537_i3forward_frame_2 - 3.2 7.7 7.8 1.1 9.1 2.7 2.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_44304_length_448_cov_600.423729_g3537_i3forward_frame_2 - 4.1 7.4 7.4 0.92 9.4 2.8 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Cnn_1N PF07989.11 NODE_44290_length_449_cov_2.915459_g36564_i0reverse_frame_3 - 0.048 13.8 1.5 0.083 13.1 1.5 1.3 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF2512 PF10710.9 NODE_44287_length_449_cov_3.072464_g36561_i0forward_frame_3 - 0.0015 18.2 0.4 0.0018 18.0 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2512) Chorismate_bind PF00425.18 NODE_44286_length_449_cov_3.079710_g36560_i0reverse_frame_3 - 1.5e-55 188.6 0.0 1.6e-55 188.5 0.0 1.0 1 0 0 1 1 1 1 chorismate binding enzyme Aha1_N PF09229.11 NODE_44277_length_449_cov_72.055556_g36551_i0forward_frame_3 - 0.0026 18.0 0.4 0.0051 17.0 0.4 1.5 1 1 0 1 1 1 1 Activator of Hsp90 ATPase, N-terminal CEP170_C PF15308.6 NODE_44276_length_449_cov_72.640097_g36550_i0reverse_frame_2 - 0.17 10.5 0.9 0.18 10.4 0.9 1.0 1 0 0 1 1 1 0 CEP170 C-terminus TGT PF01702.18 NODE_44276_length_449_cov_72.640097_g36550_i0forward_frame_3 - 1.8e-17 63.5 0.0 2.2e-17 63.2 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase NTPase_I-T PF01931.18 NODE_44273_length_449_cov_80.913043_g36547_i0reverse_frame_3 - 2.3e-12 47.0 0.0 3.1e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF84 DUF1932 PF09130.11 NODE_44271_length_449_cov_87.818841_g36545_i0reverse_frame_3 - 0.02 14.8 0.6 0.036 14.0 0.2 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1932) AC_N PF16214.5 NODE_44271_length_449_cov_87.818841_g36545_i0forward_frame_2 - 0.015 14.5 1.6 0.018 14.2 1.6 1.2 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region TPR_1 PF00515.28 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 4.8e-13 48.3 0.8 6.4e-07 28.9 0.0 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 4.9e-11 41.9 0.2 9.6e-05 22.2 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 1.5e-08 34.1 2.6 8.5e-05 22.5 0.1 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 1.7e-08 34.0 0.2 1.1e-06 28.3 0.1 2.5 3 0 0 3 3 3 1 TPR repeat TPR_7 PF13176.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 8e-08 31.8 0.3 0.0048 16.8 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 2.1e-05 24.7 0.1 0.049 13.9 0.1 2.7 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 2.1e-05 24.8 0.1 0.058 14.0 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 3.8e-05 24.1 0.0 0.082 13.8 0.0 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 0.00035 21.0 0.0 0.18 12.3 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 0.0016 18.2 0.0 0.046 13.6 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 0.008 16.8 0.0 0.14 12.8 0.0 2.3 3 0 0 3 3 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 0.02 15.0 0.1 4.5 7.4 0.0 2.5 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat MIT PF04212.18 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 0.021 14.9 0.4 6.9 6.8 0.0 2.7 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain LANC_like PF05147.13 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 0.059 11.9 0.1 0.064 11.8 0.1 1.2 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein TPR_9 PF13371.6 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 0.076 13.2 0.0 4.8 7.4 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat PPR PF01535.20 NODE_44268_length_449_cov_101.468599_g36542_i0forward_frame_3 - 0.083 13.2 0.5 0.55 10.6 0.2 2.3 2 0 0 2 2 2 0 PPR repeat ComX PF05952.12 NODE_44262_length_449_cov_127.574879_g36537_i0forward_frame_3 - 0.18 11.8 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 Bacillus competence pheromone ComX Pescadillo_N PF06732.11 NODE_44262_length_449_cov_127.574879_g36537_i0forward_frame_2 - 0.081 12.5 0.9 0.11 12.0 0.9 1.1 1 0 0 1 1 1 0 Pescadillo N-terminus TM2 PF05154.16 NODE_44261_length_449_cov_137.698068_g36536_i0forward_frame_3 - 0.02 15.2 0.1 0.061 13.6 0.1 1.8 1 0 0 1 1 1 0 TM2 domain SoPB_HTH PF18090.1 NODE_44259_length_449_cov_161.101449_g36534_i0reverse_frame_2 - 0.057 13.6 0.1 0.088 13.0 0.1 1.2 1 0 0 1 1 1 0 Centromere-binding protein HTH domain p6 PF17548.2 NODE_44258_length_449_cov_165.132850_g36533_i0forward_frame_2 - 0.2 11.6 0.0 0.3 11.1 0.0 1.3 1 0 0 1 1 1 0 Histone-like Protein p6 DUF4373 PF14297.6 NODE_44250_length_449_cov_315.207729_g36525_i0reverse_frame_2 - 0.075 13.8 0.1 0.12 13.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4373) MitoNEET_N PF10660.9 NODE_44242_length_449_cov_9531.410628_g36520_i0reverse_frame_3 - 2.7 8.1 8.4 6.4 6.9 1.0 2.3 2 0 0 2 2 2 0 Iron-containing outer mitochondrial membrane protein N-terminus Plasmodium_HRP PF05403.11 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_2 - 0.0042 16.9 2.2 0.005 16.7 2.2 1.1 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_2 - 0.41 10.6 6.3 4.1 7.4 0.6 2.4 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain HTH_39 PF14090.6 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_2 - 0.49 10.2 2.1 4.8 7.0 0.2 2.4 1 1 1 2 2 2 0 Helix-turn-helix domain HigB-like_toxin PF05015.13 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_2 - 2.5 8.6 6.3 19 5.7 1.4 2.2 1 1 1 2 2 2 0 RelE-like toxin of type II toxin-antitoxin system HigB Forkhead_N PF08430.12 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_2 - 6.6 7.3 29.9 14 6.3 29.9 1.5 1 1 0 1 1 1 0 Forkhead N-terminal region RPA_C PF08784.11 NODE_44242_length_449_cov_9531.410628_g36520_i0forward_frame_2 - 8.6 7.1 11.6 19 6.0 4.3 2.2 1 1 1 2 2 2 0 Replication protein A C terminal CxC2 PF18803.1 NODE_44238_length_450_cov_1.587952_g36516_i0reverse_frame_3 - 0.017 15.3 0.1 0.022 14.9 0.1 1.3 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases DUF432 PF04254.13 NODE_44235_length_450_cov_2.534940_g36513_i0reverse_frame_3 - 0.017 15.3 0.4 0.03 14.5 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF432) 7TM_GPCR_Str PF10326.9 NODE_44235_length_450_cov_2.534940_g36513_i0forward_frame_3 - 0.017 14.5 10.0 0.021 14.2 10.0 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Str DUF3935 PF13071.6 NODE_44231_length_450_cov_2.696386_g36509_i0reverse_frame_2 - 0.0012 19.3 1.1 0.0023 18.5 1.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3935) RNase_E_G PF10150.9 NODE_44231_length_450_cov_2.696386_g36509_i0forward_frame_3 - 0.18 11.2 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease E/G family Chromadorea_ALT PF05535.12 NODE_44230_length_450_cov_2.756627_g36508_i0reverse_frame_2 - 0.42 10.8 7.7 5.1 7.4 0.0 2.8 3 1 0 3 3 3 0 Chromadorea ALT protein AATase PF07247.12 NODE_44222_length_450_cov_15.703614_g36501_i0reverse_frame_3 - 2e-05 23.3 0.4 2.5e-05 23.0 0.4 1.1 1 0 0 1 1 1 1 Alcohol acetyltransferase WES_acyltransf PF03007.16 NODE_44222_length_450_cov_15.703614_g36501_i0reverse_frame_3 - 0.0047 16.7 0.0 0.0065 16.3 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain zf-C2H2_3rep PF18868.1 NODE_44222_length_450_cov_15.703614_g36501_i0reverse_frame_3 - 0.077 13.7 0.2 0.17 12.6 0.2 1.5 1 1 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats DUF5478 PF17572.2 NODE_44222_length_450_cov_15.703614_g36501_i0reverse_frame_2 - 0.0098 16.0 3.4 0.018 15.2 3.4 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5478) PepX_C PF08530.10 NODE_44215_length_450_cov_75.790361_g36494_i0reverse_frame_3 - 0.054 13.4 0.0 0.083 12.8 0.0 1.3 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Ribonuc_red_lgC PF02867.15 NODE_44215_length_450_cov_75.790361_g36494_i0reverse_frame_2 - 0.16 10.5 0.0 0.2 10.1 0.0 1.0 1 0 0 1 1 1 0 Ribonucleotide reductase, barrel domain Lum_binding PF00677.17 NODE_44215_length_450_cov_75.790361_g36494_i0forward_frame_3 - 0.054 13.5 0.0 0.063 13.3 0.0 1.3 1 0 0 1 1 1 0 Lumazine binding domain Helicase_PWI PF18149.1 NODE_44214_length_450_cov_77.645783_g36493_i0reverse_frame_3 - 1.2e-05 25.4 0.4 1.9e-05 24.8 0.4 1.3 1 1 0 1 1 1 1 N-terminal helicase PWI domain U-box PF04564.15 NODE_44213_length_450_cov_78.703614_g36492_i0reverse_frame_2 - 1.4e-14 54.0 0.0 2e-14 53.5 0.0 1.2 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 NODE_44213_length_450_cov_78.703614_g36492_i0reverse_frame_2 - 0.055 13.3 0.0 0.14 12.0 0.0 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit TetR_C_31 PF17940.1 NODE_44213_length_450_cov_78.703614_g36492_i0reverse_frame_2 - 0.1 12.8 0.5 0.24 11.6 0.1 1.8 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF5440 PF17509.2 NODE_44212_length_450_cov_79.643373_g36491_i0forward_frame_3 - 0.17 11.5 0.0 0.28 10.8 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5440) Xlink PF00193.17 NODE_44211_length_450_cov_84.156627_g36490_i0reverse_frame_3 - 0.00047 20.5 2.7 0.29 11.6 0.4 2.3 1 1 1 2 2 2 2 Extracellular link domain MARVEL PF01284.23 NODE_44206_length_450_cov_95.330120_g36485_i0forward_frame_2 - 0.025 14.6 0.0 0.027 14.5 0.0 1.1 1 0 0 1 1 1 0 Membrane-associating domain EphA2_TM PF14575.6 NODE_44204_length_450_cov_98.573494_g36483_i0reverse_frame_2 - 0.56 11.1 2.9 1.7 9.5 2.9 2.0 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain TyrRSs_C PF16714.5 NODE_44200_length_450_cov_118.872289_g36479_i0forward_frame_2 - 0.16 11.8 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain UB2H PF14814.6 NODE_44196_length_450_cov_180.207229_g36475_i0forward_frame_2 - 0.086 12.9 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain Sigma70_r2 PF04542.14 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_3 - 0.2 11.4 4.5 12 5.8 0.1 3.0 3 0 0 3 3 3 0 Sigma-70 region 2 bZIP_1 PF00170.21 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.014 15.5 6.3 0.62 10.2 0.5 2.9 2 1 0 3 3 3 0 bZIP transcription factor Rootletin PF15035.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.025 14.6 10.7 0.62 10.1 6.3 2.3 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion TSC22 PF01166.18 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.027 14.8 2.6 3.3 8.1 0.4 2.8 1 1 2 3 3 3 0 TSC-22/dip/bun family ADIP PF11559.8 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.043 13.9 7.8 0.13 12.3 7.4 1.9 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding GAS PF13851.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.05 12.9 9.9 0.87 8.9 5.0 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding AATF-Che1 PF13339.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.079 13.6 9.6 1 10.0 5.0 2.1 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor YabA PF06156.13 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.094 13.4 5.9 1.1 9.9 2.2 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF4472 PF14739.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.13 13.0 9.7 0.15 12.8 6.9 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) FUSC PF04632.12 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.16 10.4 10.1 0.19 10.3 10.1 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Fez1 PF06818.15 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.17 12.3 15.1 0.28 11.6 15.1 1.4 1 1 0 1 1 1 0 Fez1 Spc24 PF08286.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.32 11.2 11.4 0.68 10.2 3.9 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Phage_GPO PF05929.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.48 10.0 7.3 0.97 9.0 7.2 1.5 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF4407 PF14362.6 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.56 9.5 10.9 0.62 9.4 10.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CHDCT2 PF08074.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.63 10.2 3.1 0.86 9.8 3.1 1.3 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain Paralemmin PF03285.15 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.63 9.6 13.3 0.87 9.1 4.0 2.0 1 1 1 2 2 2 0 Paralemmin GrpE PF01025.19 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 0.81 9.3 8.0 2.3 7.9 2.2 2.2 1 1 1 2 2 2 0 GrpE YlqD PF11068.8 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 1.1 9.7 7.4 1.4 9.3 6.9 1.5 1 1 0 1 1 1 0 YlqD protein DUF3450 PF11932.8 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 1.5 8.0 10.7 1.2 8.4 6.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Uso1_p115_C PF04871.13 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 1.7 9.1 16.4 75 3.7 16.4 2.3 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region UPF0242 PF06785.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 1.9 8.5 8.2 2.4 8.2 8.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 2.1 8.9 19.4 9.3 6.8 18.4 2.2 1 1 0 1 1 1 0 Apg6 coiled-coil region TPR_MLP1_2 PF07926.12 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 2.7 8.1 17.6 7.9 6.6 17.3 2.1 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 NODE_44191_length_450_cov_294.624096_g36470_i0reverse_frame_2 - 3.7 6.3 14.6 4.8 6.0 14.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein GFD1 PF17331.2 NODE_44191_length_450_cov_294.624096_g36470_i0forward_frame_2 - 0.32 11.2 0.1 42 4.5 0.0 2.1 2 0 0 2 2 2 0 GFD1 mRNA transport factor HMG_box PF00505.19 NODE_44183_length_450_cov_3029.604819_g36464_i0forward_frame_3 - 6.1e-07 29.8 0.2 1.2e-06 28.8 0.2 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_44183_length_450_cov_3029.604819_g36464_i0forward_frame_3 - 0.00014 22.3 0.2 0.00028 21.4 0.2 1.5 1 0 0 1 1 1 1 HMG-box domain EF-hand_1 PF00036.32 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_3 - 9.6e-06 24.8 0.1 1.9e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_3 - 0.00088 19.0 0.0 0.0047 16.8 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_3 - 0.00088 18.7 2.0 0.0012 18.2 0.1 2.1 2 1 1 3 3 3 1 EF hand EF-hand_7 PF13499.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_3 - 0.0013 19.2 0.1 0.0022 18.4 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_2 - 0.0023 17.3 0.2 0.004 16.6 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_2 - 0.011 15.7 0.1 0.023 14.6 0.1 1.5 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_44181_length_450_cov_14508.696386_g34556_i3forward_frame_2 - 0.058 13.8 0.0 0.085 13.3 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair HMMR_N PF15905.5 ORF99703 - 0.026 14.0 16.0 0.03 13.8 16.0 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF4140 PF13600.6 ORF99703 - 0.041 14.3 6.0 0.076 13.5 0.3 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) CrtC PF07143.11 ORF99703 - 0.046 14.4 0.4 0.064 13.9 0.4 1.2 1 0 0 1 1 1 0 CrtC N-terminal lipocalin domain DUF1043 PF06295.12 ORF99703 - 0.47 10.5 11.4 1.3 9.0 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) V_ATPase_I PF01496.19 ORF98914 - 7.9e-61 206.0 5.5 9.4e-61 205.8 5.5 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family NiFeSe_Hases PF00374.19 ORF98653 - 2.4e-53 181.8 0.3 2.7e-53 181.6 0.3 1.0 1 0 0 1 1 1 1 Nickel-dependent hydrogenase Ank_2 PF12796.7 ORF98087 - 6.6e-34 116.4 0.2 1.6e-14 54.3 0.0 2.6 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF98087 - 8.1e-29 99.6 1.8 5e-09 36.5 0.0 3.6 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF98087 - 2.7e-26 90.8 0.1 8.8e-07 29.1 0.0 4.8 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF98087 - 1.1e-24 86.1 0.6 4.8e-09 36.3 0.0 4.0 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF98087 - 1.3e-20 71.3 0.1 2.1e-05 24.5 0.0 4.4 5 0 0 5 5 5 3 Ankyrin repeat TPH PF13868.6 ORF97739 - 0.0029 16.2 31.9 0.0038 15.8 31.9 1.2 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF2924 PF11149.8 ORF97739 - 0.0091 16.4 7.0 0.0091 16.4 7.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2924) VTC PF09359.10 ORF97739 - 0.88 8.9 13.6 1.2 8.5 13.6 1.2 1 0 0 1 1 1 0 VTC domain RNA_pol_Rbc25 PF08292.12 ORF97739 - 8.5 6.6 9.7 8.5 6.6 8.6 1.6 1 1 1 2 2 2 0 RNA polymerase III subunit Rpc25 DUF4694 PF15765.5 ORF97590 - 0.015 15.4 0.8 2.5 8.1 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4694) EF-hand_7 PF13499.6 ORF9753 - 3e-17 62.8 1.2 6.8e-08 32.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF9753 - 3.5e-10 38.7 5.9 5.5e-08 31.8 0.1 3.6 4 1 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF9753 - 7.9e-10 37.9 2.8 1e-06 28.1 0.1 3.7 2 1 2 4 4 4 2 EF-hand domain EF-hand_9 PF14658.6 ORF9753 - 2.5e-09 37.3 0.2 1.1e-07 32.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 ORF9753 - 1.6e-05 24.7 9.1 0.14 12.0 0.1 4.0 1 1 3 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF9753 - 0.00047 19.5 4.1 0.0014 18.1 0.3 3.2 3 0 0 3 3 3 1 EF hand Tsc35 PF15079.6 ORF9753 - 0.0028 17.3 2.9 0.24 10.9 1.7 2.2 2 0 0 2 2 2 2 Testis-specific protein 35 EF-hand_4 PF12763.7 ORF9753 - 0.03 14.3 4.3 3.6 7.6 0.6 2.6 1 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF9753 - 0.032 14.5 0.5 4.4 7.6 0.0 2.2 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region IL13 PF03487.13 ORF9753 - 0.11 12.3 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 Interleukin-13 DUF3349 PF11829.8 ORF9753 - 0.19 12.5 2.1 0.83 10.5 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) CAF1A PF12253.8 ORF97270 - 0.14 12.3 6.4 0.2 11.8 6.4 1.2 1 0 0 1 1 1 0 Chromatin assembly factor 1 subunit A DUF386 PF04074.12 ORF97140 - 1.6e-24 86.5 0.5 1.8e-24 86.3 0.5 1.0 1 0 0 1 1 1 1 YhcH/YjgK/YiaL AraC_binding_2 PF14525.6 ORF97140 - 0.0031 17.2 0.0 0.07 12.8 0.0 2.0 2 0 0 2 2 2 1 AraC-binding-like domain PSII_Pbs27 PF13326.6 ORF96448 - 0.003 17.9 0.1 0.0037 17.6 0.1 1.2 1 0 0 1 1 1 1 Photosystem II Pbs27 PL48 PF15903.5 ORF96448 - 0.0036 16.4 3.9 0.0043 16.1 3.9 1.1 1 0 0 1 1 1 1 Filopodia upregulated, FAM65 HAGH_C PF16123.5 ORF96413 - 4.4e-18 65.6 0.0 6.2e-18 65.1 0.0 1.2 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus 2_5_RNA_ligase2 PF13563.6 ORF90136 - 0.0043 17.0 0.0 0.0055 16.6 0.0 1.3 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily Herpes_capsid PF06112.11 ORF90019 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF90018 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF88886 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF88885 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Ribosomal_L9_C PF03948.14 ORF88051 - 1.6e-25 89.4 1.8 2.6e-25 88.7 1.8 1.4 1 0 0 1 1 1 1 Ribosomal protein L9, C-terminal domain Ribosomal_L9_N PF01281.19 ORF88051 - 1.9e-22 78.5 0.3 3.7e-22 77.6 0.3 1.5 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain NP1-WLL PF11733.8 ORF85820 - 0.32 10.7 6.4 0.35 10.6 6.4 1.2 1 0 0 1 1 1 0 Non-capsid protein NP1 DUF667 PF05018.13 ORF81138 - 4.2e-60 202.6 1.8 5e-60 202.4 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) TGBp3 PF02495.17 ORF80896 - 0.8 9.4 4.0 2.8 7.7 4.3 1.7 1 1 0 1 1 1 0 Triple gene block 3 Aminotran_3 PF00202.21 ORF80278 - 3.3e-33 114.9 0.0 3.7e-33 114.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Beta-lactamase PF00144.24 ORF80082 - 1.1e-07 31.4 0.2 1.3e-07 31.2 0.2 1.1 1 0 0 1 1 1 1 Beta-lactamase Carb_bind PF10645.9 ORF7947 - 0.6 10.4 6.1 0.42 10.9 1.2 2.7 3 0 0 3 3 3 0 Carbohydrate binding BAR_2 PF10455.9 ORF79128 - 0.11 11.6 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 Bin/amphiphysin/Rvs domain for vesicular trafficking DUF3665 PF12427.8 ORF78233 - 1.9 8.2 3.7 0.87 9.3 0.5 1.9 2 0 0 2 2 2 0 Branched-chain amino acid aminotransferase EF-hand_7 PF13499.6 ORF76446 - 8.2e-17 61.4 1.5 6.8e-08 32.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF76446 - 5e-10 38.2 5.4 5.5e-08 31.8 0.1 3.4 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF76446 - 1.4e-09 37.1 2.6 1e-06 28.1 0.1 3.5 2 1 2 4 4 4 2 EF-hand domain EF-hand_9 PF14658.6 ORF76446 - 2.4e-09 37.4 0.3 1.1e-07 32.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 ORF76446 - 6.1e-05 22.8 9.9 0.14 12.0 0.1 4.0 1 1 4 5 5 5 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF76446 - 0.00019 20.8 1.8 0.0014 18.1 0.3 2.8 2 0 0 2 2 2 1 EF hand Tsc35 PF15079.6 ORF76446 - 0.0028 17.2 2.9 0.24 10.9 1.7 2.2 2 0 0 2 2 2 2 Testis-specific protein 35 IL13 PF03487.13 ORF76446 - 0.11 12.2 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 Interleukin-13 DUF3349 PF11829.8 ORF76446 - 0.19 12.5 2.1 0.83 10.5 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3349) SPARC_Ca_bdg PF10591.9 ORF76446 - 0.22 11.8 0.6 4.4 7.6 0.0 2.2 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region NP1-WLL PF11733.8 ORF76108 - 0.32 10.7 6.4 0.35 10.6 6.4 1.2 1 0 0 1 1 1 0 Non-capsid protein NP1 Amidohydro_3 PF07969.11 ORF74016 - 0.044 13.2 0.1 0.051 13.0 0.1 1.1 1 0 0 1 1 1 0 Amidohydrolase family DUF4575 PF15143.6 ORF72348 - 0.073 13.3 5.1 2.8 8.2 0.2 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4575) FGFR3_TM PF18123.1 ORF72348 - 1.8 8.1 9.5 2.5 7.7 1.0 3.2 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain TMF_DNA_bd PF12329.8 ORF71972 - 0.1 12.6 1.1 0.15 12.0 1.1 1.2 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Draxin PF15550.6 ORF71348 - 0.017 15.0 6.9 0.018 14.9 6.9 1.1 1 0 0 1 1 1 0 Draxin SPACA9 PF15120.6 ORF70870 - 0.013 15.3 4.9 0.018 14.8 4.9 1.2 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 DUF2508 PF10704.9 ORF70870 - 0.031 14.4 7.9 0.031 14.4 7.9 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF2508) ERM PF00769.19 ORF70870 - 0.16 11.8 27.0 0.34 10.7 27.0 1.5 1 1 0 1 1 1 0 Ezrin/radixin/moesin family Spc7 PF08317.11 ORF70870 - 0.2 10.5 23.2 0.3 9.9 23.2 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF3584 PF12128.8 ORF70870 - 0.3 8.6 21.4 0.35 8.3 21.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) STN1_2 PF09170.10 ORF70870 - 0.35 11.1 11.5 0.43 10.8 11.5 1.1 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 Yuri_gagarin PF15934.5 ORF70870 - 0.51 10.1 17.8 1.6 8.5 17.9 1.6 1 1 0 1 1 1 0 Yuri gagarin CC2-LZ PF16516.5 ORF70870 - 1.2 9.5 24.2 1.8 9.0 12.8 2.2 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator KxDL PF10241.9 ORF70870 - 1.3 9.3 17.4 0.56 10.5 7.7 2.5 1 1 0 2 2 2 0 Uncharacterized conserved protein Atg14 PF10186.9 ORF70870 - 1.6 7.8 25.3 12 4.9 16.2 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2570 PF10828.8 ORF70870 - 1.7 8.5 20.8 0.36 10.7 12.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) Mod_r PF07200.13 ORF70870 - 2.1 8.5 25.4 0.12 12.5 17.2 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein HIP1_clath_bdg PF16515.5 ORF70870 - 2.3 8.9 24.8 4.1 8.1 2.1 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CorA PF01544.18 ORF70870 - 3.1 7.0 10.5 3.1 7.0 9.1 1.5 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein AAA_23 PF13476.6 ORF70870 - 3.8 8.0 27.6 5.8 7.4 27.6 1.4 1 0 0 1 1 1 0 AAA domain TEX13 PF15186.6 ORF70870 - 3.9 7.1 14.5 5.6 6.6 13.8 1.6 1 1 1 2 2 2 0 Testis-expressed sequence 13 protein family LPD5 PF18799.1 ORF70870 - 4.2 7.8 17.2 8.9 6.7 17.2 1.6 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 PTS_IIA PF02255.16 ORF70870 - 4.2 7.5 11.4 0.34 11.0 5.8 2.1 2 1 1 3 3 3 0 PTS system, Lactose/Cellobiose specific IIA subunit Fib_alpha PF08702.10 ORF70870 - 4.5 7.5 21.2 2.7 8.2 10.3 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Sulfatase_C PF14707.6 ORF70870 - 4.8 7.9 9.3 6 7.6 2.4 2.4 1 1 2 3 3 3 0 C-terminal region of aryl-sulfatase GAS PF13851.6 ORF70870 - 4.9 6.4 33.5 89 2.3 33.6 2.0 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding FapA PF03961.13 ORF70870 - 8.4 4.9 25.6 3.5 6.1 16.4 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF4407 PF14362.6 ORF70870 - 9.1 5.5 15.6 12 5.1 15.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) BST2 PF16716.5 ORF70870 - 9.9 6.8 23.2 9.1 6.9 13.8 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Acyl_transf_3 PF01757.22 ORF70290 - 0.027 13.6 1.9 0.031 13.3 1.9 1.1 1 0 0 1 1 1 0 Acyltransferase family Sulfatase_C PF14707.6 ORF70127 - 0.0012 19.5 0.0 0.0029 18.3 0.0 1.6 2 0 0 2 2 2 1 C-terminal region of aryl-sulfatase DUF4976 PF16347.5 ORF70127 - 0.0047 17.2 0.0 0.028 14.7 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4976) PPP4R2 PF09184.11 ORF70099 - 0.017 14.7 29.8 0.02 14.5 29.8 1.1 1 0 0 1 1 1 0 PPP4R2 BUD22 PF09073.10 ORF70099 - 0.022 14.2 29.3 0.024 14.0 29.3 1.2 1 0 0 1 1 1 0 BUD22 CDC27 PF09507.10 ORF70099 - 0.16 11.3 30.6 0.22 10.9 30.6 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 SDA1 PF05285.12 ORF70099 - 0.68 9.3 32.2 0.85 9.0 32.2 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF70099 - 0.7 8.0 34.0 0.75 7.9 34.0 1.1 1 0 0 1 1 1 0 Nop14-like family DUF913 PF06025.12 ORF70099 - 1.3 7.9 12.0 1.5 7.7 12.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) CNDH2_C PF16858.5 ORF70099 - 1.5 8.7 14.6 1.7 8.5 14.6 1.1 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term TFIIA PF03153.13 ORF70099 - 3.7 7.5 34.2 4.6 7.1 34.2 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit NPR3 PF03666.13 ORF70099 - 4.7 5.9 13.6 4.5 6.0 13.6 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 FAM60A PF15396.6 ORF70099 - 8.9 6.3 8.0 11 5.9 8.0 1.4 1 0 0 1 1 1 0 Protein Family FAM60A DUF3399 PF11879.8 ORF69611 - 0.083 13.2 0.1 0.18 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) Ank_5 PF13857.6 ORF69280 - 1.1e-15 57.5 0.0 3e-07 30.6 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF69280 - 1.2e-14 54.6 0.2 2e-14 53.9 0.2 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF69280 - 6e-13 48.6 0.0 9.5e-06 25.8 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF69280 - 1e-12 48.3 0.0 2.1e-12 47.3 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF69280 - 4e-12 45.2 0.0 3.7e-05 23.8 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeat DUF3747 PF12565.8 ORF69280 - 0.14 11.5 0.1 0.32 10.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3747) PPP4R2 PF09184.11 ORF69218 - 0.017 14.7 29.8 0.02 14.5 29.8 1.1 1 0 0 1 1 1 0 PPP4R2 BUD22 PF09073.10 ORF69218 - 0.02 14.3 29.3 0.022 14.1 29.3 1.2 1 0 0 1 1 1 0 BUD22 CDC27 PF09507.10 ORF69218 - 0.15 11.4 30.2 0.21 11.0 30.2 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 SDA1 PF05285.12 ORF69218 - 0.55 9.6 31.4 0.69 9.3 31.4 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF69218 - 0.69 8.0 33.9 0.73 8.0 33.9 1.1 1 0 0 1 1 1 0 Nop14-like family CNDH2_C PF16858.5 ORF69218 - 1.4 8.7 14.5 1.6 8.5 14.5 1.1 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term DUF913 PF06025.12 ORF69218 - 1.5 7.8 11.8 1.6 7.6 11.8 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) TFIIA PF03153.13 ORF69218 - 3.1 7.7 34.6 3.8 7.4 34.6 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit NPR3 PF03666.13 ORF69218 - 5 5.8 13.5 4.7 5.9 13.5 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Polyoma_agno PF01736.16 ORF68725 - 0.91 9.3 4.7 17 5.2 0.1 2.3 1 1 1 2 2 2 0 Polyomavirus agnoprotein LSR PF05624.14 ORF67459 - 0.99 9.5 8.3 4.8 7.3 1.9 2.3 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) DUF4200 PF13863.6 ORF66992 - 0.84 10.0 8.8 0.45 10.9 0.4 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) Ni_hydr_CYTB PF01292.20 ORF65165 - 6.9e-08 32.3 9.0 8.8e-08 32.0 9.0 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 PepSY_TM PF03929.16 ORF65165 - 0.0098 15.6 0.7 0.012 15.3 0.7 1.2 1 0 0 1 1 1 1 PepSY-associated TM region DUF4405 PF14358.6 ORF65165 - 0.11 13.0 12.9 0.25 11.9 12.9 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4405) Tmemb_55A PF09788.9 ORF65165 - 0.44 9.6 1.9 0.57 9.2 1.9 1.1 1 0 0 1 1 1 0 Transmembrane protein 55A DUF3624 PF12292.8 ORF65165 - 2.8 8.4 5.7 4.3 7.8 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3624) EF-hand_7 PF13499.6 ORF64200 - 4.7e-05 23.7 4.9 0.00011 22.6 4.9 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF64200 - 0.0024 17.3 3.6 0.37 10.4 0.6 2.8 2 1 0 2 2 2 2 EF hand Myb_DNA-bind_3 PF12776.7 ORF64200 - 0.0031 18.4 0.4 0.0048 17.9 0.4 1.4 1 0 0 1 1 1 1 Myb/SANT-like DNA-binding domain DUF3340 PF11818.8 ORF64200 - 0.025 14.8 0.5 0.029 14.6 0.5 1.3 1 1 0 1 1 1 0 C-terminal domain of tail specific protease (DUF3340) Thioredoxin_8 PF13905.6 ORF64200 - 0.038 14.3 0.5 0.056 13.8 0.5 1.4 1 0 0 1 1 1 0 Thioredoxin-like PTS_IIB PF02302.17 ORF64200 - 0.052 14.2 0.0 0.099 13.4 0.0 1.5 1 1 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIB subunit DUF4248 PF14053.6 ORF64200 - 0.058 13.4 0.1 0.14 12.2 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4248) EF-hand_6 PF13405.6 ORF64200 - 0.06 13.3 4.3 0.49 10.5 1.3 2.7 2 1 1 3 3 3 0 EF-hand domain Spore_GerAC PF05504.11 ORF64200 - 0.084 13.1 1.9 0.41 10.9 1.9 1.9 1 1 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal AJAP1_PANP_C PF15298.6 ORF63935 - 0.11 12.7 0.6 0.16 12.2 0.6 1.2 1 0 0 1 1 1 0 AJAP1/PANP C-terminus Herpes_capsid PF06112.11 ORF62789 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF62788 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF5529 PF17669.1 ORF61450 - 0.021 14.8 1.7 0.028 14.4 1.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5529) Herpes_capsid PF06112.11 ORF60374 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF60373 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein TSC22 PF01166.18 ORF58834 - 9.6e-05 22.6 1.7 0.0002 21.6 1.7 1.5 1 0 0 1 1 1 1 TSC-22/dip/bun family KASH_CCD PF14662.6 ORF58834 - 0.00032 20.6 7.2 0.00038 20.3 7.2 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Shugoshin_N PF07558.11 ORF58834 - 0.00049 19.9 1.4 0.001 18.9 1.4 1.6 1 0 0 1 1 1 1 Shugoshin N-terminal coiled-coil region YabA PF06156.13 ORF58834 - 0.00075 20.1 4.5 0.001 19.7 4.5 1.3 1 0 0 1 1 1 1 Initiation control protein YabA DivIC PF04977.15 ORF58834 - 0.026 14.3 1.6 0.026 14.3 1.6 2.7 2 1 1 3 3 3 0 Septum formation initiator DUF4094 PF13334.6 ORF58834 - 0.059 13.8 0.4 0.19 12.2 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) bZIP_1 PF00170.21 ORF58834 - 0.075 13.1 3.4 0.19 11.9 3.3 1.8 1 1 0 1 1 1 0 bZIP transcription factor ZapB PF06005.12 ORF58834 - 0.31 11.5 5.4 0.22 12.0 3.8 1.6 1 1 0 1 1 1 0 Cell division protein ZapB tRNA_NucTran2_2 PF13735.6 ORF57971 - 0.015 15.3 0.0 0.023 14.7 0.0 1.2 1 0 0 1 1 1 0 tRNA nucleotidyltransferase domain 2 putative TGBp3 PF02495.17 ORF56977 - 0.8 9.4 4.0 2.8 7.7 4.3 1.7 1 1 0 1 1 1 0 Triple gene block 3 TGBp3 PF02495.17 ORF56477 - 0.8 9.4 4.0 2.8 7.7 4.3 1.7 1 1 0 1 1 1 0 Triple gene block 3 zf-C3HC4_3 PF13920.6 ORF55600 - 3.4 7.6 8.6 1.3 8.9 5.7 1.8 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF61 PF01886.16 ORF55523 - 0.039 14.0 0.6 0.054 13.5 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF61 DUF4659 PF15558.6 ORF55057 - 0.014 14.3 6.0 0.017 14.0 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4659) DUF16 PF01519.16 ORF55057 - 0.017 15.6 8.4 0.78 10.3 4.5 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF16 Tfb2_C PF18307.1 ORF55057 - 0.018 15.4 0.1 0.034 14.6 0.1 1.4 1 0 0 1 1 1 0 Transcription factor Tfb2 (p52) C-terminal domain TaqI_C PF12950.7 ORF55057 - 0.042 13.9 0.9 0.051 13.7 0.9 1.2 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain DUF2203 PF09969.9 ORF55057 - 0.068 13.9 2.5 0.095 13.4 2.5 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) PhoQ_Sensor PF08918.10 ORF55057 - 0.11 12.4 1.3 0.14 12.0 1.3 1.2 1 0 0 1 1 1 0 PhoQ Sensor TGBp3 PF02495.17 ORF54151 - 0.8 9.4 4.0 2.8 7.7 4.3 1.7 1 1 0 1 1 1 0 Triple gene block 3 PIP5K PF01504.18 ORF50766 - 5.2e-16 58.7 0.2 6.5e-16 58.4 0.2 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase GPR15L PF15854.5 ORF48273 - 0.11 12.8 0.1 0.11 12.8 0.1 2.5 3 0 0 3 3 3 0 G-protein coupled receptor ligand 15 DUF4131 PF13567.6 ORF48273 - 5.5 6.6 7.6 7 6.3 7.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) YacG PF03884.14 ORF46547 - 0.019 14.7 2.4 0.039 13.7 2.4 1.4 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG TPKR_C2 PF16920.5 ORF46062 - 0.11 12.7 0.3 0.42 10.8 0.1 2.1 2 1 0 2 2 2 0 Tyrosine-protein kinase receptor C2 Ig-like domain EF-hand_1 PF00036.32 ORF45254 - 5.2e-42 138.3 10.2 1.2e-10 40.2 0.6 4.1 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF45254 - 1.4e-35 121.5 2.5 4.8e-18 65.4 0.9 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF45254 - 9.7e-32 108.6 11.1 6.1e-15 54.8 0.7 4.0 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF45254 - 7.1e-31 103.5 5.2 1.3e-09 37.2 0.1 4.4 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF45254 - 9.9e-27 91.2 7.3 2.3e-06 26.8 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 ORF45254 - 6.1e-16 58.5 0.2 6.4e-09 36.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF45254 - 7.9e-09 35.4 0.5 0.00031 20.6 0.1 2.3 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF45254 - 7.2e-08 32.7 0.0 0.0059 16.9 0.0 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF45254 - 4.8e-07 30.6 0.0 0.0008 20.3 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF45254 - 1.5e-05 24.9 0.0 0.042 13.9 0.0 3.0 3 0 0 3 3 3 2 Uncharacterised protein family (UPF0154) TerB PF05099.13 ORF45254 - 0.00025 21.0 0.1 0.095 12.7 0.0 2.2 1 1 1 2 2 2 1 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF45254 - 0.00037 20.6 4.4 0.052 13.8 0.4 2.8 1 1 2 3 3 3 2 Dockerin type I domain Caleosin PF05042.13 ORF45254 - 0.00074 19.5 0.4 0.48 10.3 0.0 3.4 1 1 3 4 4 4 1 Caleosin related protein DUF3349 PF11829.8 ORF45254 - 0.0009 20.0 0.4 1.8 9.4 0.0 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) DUF1103 PF06513.11 ORF45254 - 0.0044 16.7 0.9 0.0053 16.4 0.9 1.1 1 0 0 1 1 1 1 Repeat of unknown function (DUF1103) EFhand_Ca_insen PF08726.10 ORF45254 - 0.0054 16.8 0.7 0.024 14.7 0.2 2.2 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF4497 PF14924.6 ORF45254 - 0.0077 16.7 0.0 3.4 8.2 0.0 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF4497) SurA_N_2 PF13623.6 ORF45254 - 0.011 15.6 0.4 0.8 9.6 0.1 2.2 1 1 1 2 2 2 0 SurA N-terminal domain Poly_export PF02563.16 ORF45254 - 0.011 15.9 0.1 1.3 9.3 0.0 3.1 1 1 0 2 2 2 0 Polysaccharide biosynthesis/export protein RNA_pol_Rpb4 PF03874.16 ORF45254 - 0.012 15.9 2.3 1.8 8.9 0.2 2.5 3 0 0 3 3 2 0 RNA polymerase Rpb4 DUF853 PF05872.12 ORF45254 - 0.016 13.8 0.1 0.26 9.8 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) DUF5580 PF17743.1 ORF45254 - 0.027 13.0 0.0 0.027 13.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_14 PF17959.1 ORF45254 - 0.027 14.8 0.1 9.1 6.7 0.0 2.5 1 1 1 2 2 2 0 EF-hand domain YqeY PF09424.10 ORF45254 - 0.044 13.9 0.4 0.24 11.5 0.1 1.9 1 1 1 2 2 2 0 Yqey-like protein Fe_hyd_lg_C PF02906.14 ORF45254 - 0.047 13.4 0.6 0.15 11.7 0.6 1.8 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain SurA_N_3 PF13624.6 ORF45254 - 0.051 13.4 0.1 0.25 11.1 0.0 1.9 1 1 1 2 2 2 0 SurA N-terminal domain MotA_activ PF09114.10 ORF45254 - 0.056 13.6 0.2 1.1 9.4 0.0 2.2 2 1 0 2 2 2 0 Transcription factor MotA, activation domain TetR_C_7 PF14246.6 ORF45254 - 0.073 13.1 0.0 7.2 6.7 0.0 2.4 2 1 0 2 2 2 0 AefR-like transcriptional repressor, C-terminal domain Ribosomal_L34e PF01199.18 ORF44172 - 4.2e-31 107.1 0.2 4.2e-31 107.1 0.2 1.8 2 0 0 2 2 2 1 Ribosomal protein L34e PAG PF15347.6 ORF44172 - 0.0039 16.3 0.1 0.0047 16.0 0.1 1.0 1 0 0 1 1 1 1 Phosphoprotein associated with glycosphingolipid-enriched BatD PF13584.6 ORF44172 - 0.0079 15.1 0.4 0.013 14.4 0.4 1.3 1 1 0 1 1 1 1 Oxygen tolerance PX PF00787.24 ORF44128 - 1.6e-17 63.5 1.3 2e-17 63.2 1.3 1.1 1 0 0 1 1 1 1 PX domain Herpes_capsid PF06112.11 ORF42430 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF42429 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Ivy PF08816.11 ORF41697 - 0.018 15.2 0.9 0.025 14.8 0.1 1.7 2 0 0 2 2 2 0 Inhibitor of vertebrate lysozyme (Ivy) SapA PF02199.15 ORF41282 - 0.017 15.4 2.1 0.55 10.6 0.2 2.6 2 0 0 2 2 2 0 Saposin A-type domain DSPn PF14671.6 ORF41041 - 2.4e-30 105.8 0.2 3.1e-30 105.5 0.2 1.2 1 0 0 1 1 1 1 Dual specificity protein phosphatase, N-terminal half Axin_b-cat_bind PF08833.10 ORF4094 - 1.7 8.8 4.9 7.6 6.7 4.9 2.1 1 1 0 1 1 1 0 Axin beta-catenin binding domain Polyoma_agno PF01736.16 ORF4084 - 0.91 9.3 4.7 17 5.2 0.1 2.3 1 1 1 2 2 2 0 Polyomavirus agnoprotein SCP2 PF02036.17 ORF40609 - 4.8e-28 97.6 1.1 6e-28 97.3 1.1 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF40609 - 3.2e-07 30.7 0.1 4e-07 30.4 0.1 1.1 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal MORN PF02493.20 ORF37989 - 1.1e-18 65.9 11.0 0.00011 21.9 0.0 5.4 5 0 0 5 5 5 5 MORN repeat Ank_2 PF12796.7 ORF37571 - 1.6e-29 102.3 3.0 4.7e-14 52.7 0.2 2.6 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF37571 - 1.2e-23 83.1 1.4 3.7e-11 43.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF37571 - 9e-23 77.9 0.2 1.1e-05 25.4 0.0 4.4 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 ORF37571 - 8.3e-22 77.0 5.9 6.9e-06 26.2 0.1 4.1 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF37571 - 8.5e-20 70.3 4.2 4.1e-05 23.8 0.1 4.6 5 0 0 5 5 5 4 Ankyrin repeat WPP PF13943.6 ORF37571 - 0.18 12.2 2.1 2.8 8.4 0.3 2.5 1 1 2 3 3 3 0 WPP domain TPR_1 PF00515.28 ORF37556 - 2.6e-17 61.8 0.5 6.2e-05 22.6 0.3 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF37556 - 3.6e-14 51.6 0.5 0.00015 21.6 0.9 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF37556 - 4.2e-08 32.8 1.0 0.0048 17.0 0.0 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF37556 - 1.4e-07 31.3 0.1 0.019 15.3 0.1 3.5 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF37556 - 1.3e-06 28.9 0.1 0.00037 21.1 0.4 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF37556 - 6.1e-06 26.5 0.2 0.58 10.9 0.4 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF37556 - 4.9e-05 22.9 3.9 0.04 13.6 0.0 4.0 1 1 3 4 4 4 1 TPR repeat TPR_14 PF13428.6 ORF37556 - 0.00022 21.8 0.0 1.8 9.6 0.0 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF37556 - 0.00069 19.7 0.0 0.027 14.6 0.0 2.5 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF37556 - 0.00092 19.4 0.7 2.8 8.3 0.6 2.9 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF37556 - 0.016 15.7 0.4 0.38 11.3 0.5 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Paf67 PF10255.9 ORF37556 - 0.018 14.0 0.6 0.11 11.5 0.1 1.9 1 1 1 2 2 2 0 RNA polymerase I-associated factor PAF67 TPR_10 PF13374.6 ORF37556 - 0.08 12.8 0.1 7.1 6.7 0.0 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat Ferritin PF00210.24 ORF35892 - 0.012 15.6 0.1 0.019 14.9 0.1 1.3 1 0 0 1 1 1 0 Ferritin-like domain TGBp3 PF02495.17 ORF34721 - 0.8 9.4 4.0 2.8 7.7 4.3 1.7 1 1 0 1 1 1 0 Triple gene block 3 PPP4R2 PF09184.11 ORF33776 - 0.017 14.7 29.8 0.02 14.5 29.8 1.1 1 0 0 1 1 1 0 PPP4R2 BUD22 PF09073.10 ORF33776 - 0.02 14.3 29.3 0.022 14.1 29.3 1.2 1 0 0 1 1 1 0 BUD22 CDC27 PF09507.10 ORF33776 - 0.15 11.4 30.2 0.21 11.0 30.2 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 SDA1 PF05285.12 ORF33776 - 0.55 9.6 31.4 0.69 9.3 31.4 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF33776 - 0.69 8.0 33.9 0.73 8.0 33.9 1.1 1 0 0 1 1 1 0 Nop14-like family CNDH2_C PF16858.5 ORF33776 - 1.4 8.7 14.5 1.6 8.5 14.5 1.1 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term DUF913 PF06025.12 ORF33776 - 1.5 7.8 11.8 1.6 7.6 11.8 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) TFIIA PF03153.13 ORF33776 - 3.1 7.7 34.6 3.8 7.4 34.6 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit NPR3 PF03666.13 ORF33776 - 5 5.8 13.5 4.7 5.9 13.5 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 BenE PF03594.13 ORF33705 - 0.052 12.3 1.8 0.059 12.1 1.8 1.1 1 0 0 1 1 1 0 Benzoate membrane transport protein FKBP_C PF00254.28 ORF32774 - 1.9e-15 57.0 0.0 2.7e-15 56.5 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Ribos_L4_asso_C PF14374.6 ORF32358 - 8.3e-22 77.0 1.3 8.3e-22 77.0 1.3 2.1 3 0 0 3 3 3 1 60S ribosomal protein L4 C-terminal domain DUF4490 PF14892.6 ORF32358 - 0.0036 17.3 1.3 0.0071 16.4 1.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) BRE1 PF08647.11 ORF32358 - 1.8 8.7 13.8 6.9 6.8 13.0 2.4 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase DUF4995 PF16386.5 ORF32326 - 0.41 10.7 2.4 3.6 7.6 0.1 2.9 1 1 2 3 3 3 0 Domain of unknown function LysE PF01810.18 ORF30072 - 7.1e-39 133.3 10.2 7.9e-39 133.1 10.2 1.0 1 0 0 1 1 1 1 LysE type translocator DUF485 PF04341.12 ORF30072 - 2.1 8.4 7.5 0.16 12.0 0.6 2.3 2 1 0 2 2 2 0 Protein of unknown function, DUF485 V-set_2 PF15910.5 ORF29377 - 0.11 12.6 0.3 0.15 12.1 0.3 1.2 1 0 0 1 1 1 0 ICOS V-set domain Herpes_capsid PF06112.11 ORF29340 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF29339 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein JmjN PF02375.17 ORF29173 - 0.073 13.0 0.1 0.2 11.7 0.1 1.7 1 0 0 1 1 1 0 jmjN domain DUF3963 PF13124.6 ORF29173 - 0.23 11.4 1.5 1.5 8.8 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3963) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks171.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks171.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks171.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks171.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Auxin_canalis PF05703.11 ORF28219 - 0.046 13.7 0.1 0.05 13.5 0.1 1.1 1 0 0 1 1 1 0 Auxin canalisation DUF667 PF05018.13 ORF27901 - 4.2e-60 202.6 1.8 5e-60 202.4 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) NP1-WLL PF11733.8 ORF26106 - 0.32 10.7 6.4 0.35 10.6 6.4 1.2 1 0 0 1 1 1 0 Non-capsid protein NP1 Proteasome PF00227.26 ORF25152 - 3.2e-15 56.1 0.1 5.9e-15 55.3 0.1 1.4 1 1 0 1 1 1 1 Proteasome subunit ALF PF03752.13 ORF25152 - 0.055 13.4 1.9 0.12 12.4 0.6 2.2 1 1 1 2 2 2 0 Short repeats of unknown function PspC PF04024.12 ORF25152 - 0.094 12.5 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 PspC domain Corona_NS8 PF12093.8 ORF24904 - 0.04 14.5 0.0 0.057 14.0 0.0 1.2 1 0 0 1 1 1 0 Coronavirus NS8 protein Thionin PF00321.17 ORF22992 - 1.1 9.8 6.0 2.7 8.6 1.8 2.3 2 0 0 2 2 2 0 Plant thionin Ldt_C PF17969.1 ORF22581 - 0.4 11.4 2.5 0.75 10.6 0.2 2.4 1 1 1 2 2 2 0 L,D-transpeptidase C-terminal domain Myc_target_1 PF15179.6 ORF22581 - 1 9.3 7.6 0.23 11.3 3.9 1.8 1 1 0 2 2 2 0 Myc target protein 1 ALMT PF11744.8 ORF22581 - 7.9 5.2 11.9 8.7 5.1 11.9 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter DHHC PF01529.20 ORF21866 - 0.032 14.3 0.5 0.047 13.8 0.5 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF4796 PF16044.5 ORF20369 - 0.029 14.0 0.1 0.033 13.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4796) Rav1p_C PF12234.8 ORF19824 - 0.0081 14.6 0.2 0.0098 14.3 0.2 1.0 1 0 0 1 1 1 1 RAVE protein 1 C terminal MDH PF02315.16 ORF19128 - 0.0079 16.2 0.1 0.011 15.8 0.1 1.3 1 0 0 1 1 1 1 Methanol dehydrogenase beta subunit DSPc PF00782.20 ORF19033 - 3.3e-32 111.1 0.0 3.8e-32 110.9 0.0 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 ORF19033 - 0.0024 18.0 0.0 0.0033 17.5 0.0 1.2 1 0 0 1 1 1 1 Inositol hexakisphosphate Y_phosphatase PF00102.27 ORF19033 - 0.0048 16.5 0.1 0.011 15.3 0.1 1.4 1 1 0 1 1 1 1 Protein-tyrosine phosphatase Hexokinase_2 PF03727.16 ORF19033 - 0.087 12.2 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Hexokinase TAP_C PF03943.13 ORF19033 - 0.12 12.1 0.2 0.22 11.2 0.2 1.5 1 0 0 1 1 1 0 TAP C-terminal domain Viral_P18 PF04521.13 ORF18348 - 0.019 14.8 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein GST_C_3 PF14497.6 ORF18147 - 6.3e-10 39.1 0.2 9.4e-10 38.6 0.2 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF18147 - 0.00046 20.4 0.0 0.00068 19.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Actin_micro PF17003.5 ORF18147 - 0.018 14.2 2.0 0.11 11.7 0.1 2.0 1 1 1 2 2 2 0 Putative actin-like family MdcG PF10620.9 ORF17984 - 0.0024 17.7 0.1 0.0032 17.3 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl-dephospho-CoA transferase MdcG DUF2844 PF11005.8 ORF17984 - 0.095 12.7 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2844) DUF4744 PF15918.5 ORF17755 - 0.0053 17.6 0.9 0.0098 16.7 0.9 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4744) Tim17 PF02466.19 ORF16220 - 0.00014 22.2 3.5 0.00023 21.5 3.5 1.3 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family SAS-6_N PF16531.5 ORF15316 - 1.3e-22 80.2 3.6 1.3e-22 80.2 3.6 1.6 2 0 0 2 2 2 1 Centriolar protein SAS N-terminal Phage_head_chap PF11113.8 ORF15316 - 0.0057 16.7 0.0 0.17 12.0 0.0 2.3 2 0 0 2 2 2 1 Head assembly gene product BenE PF03594.13 ORF152252 - 0.052 12.3 1.8 0.059 12.1 1.8 1.1 1 0 0 1 1 1 0 Benzoate membrane transport protein Herpes_capsid PF06112.11 ORF152210 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF152209 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein SCHIP-1 PF10148.9 ORF151614 - 0.19 11.3 0.5 0.25 11.0 0.5 1.2 1 0 0 1 1 1 0 Schwannomin-interacting protein 1 zf_CCCH_4 PF18345.1 ORF150198 - 0.31 11.2 0.3 0.31 11.2 0.3 2.5 3 0 0 3 3 3 0 Zinc finger domain DUF3446 PF11928.8 ORF150198 - 0.38 11.1 8.3 0.79 10.1 2.2 2.2 2 0 0 2 2 2 0 Early growth response N-terminal domain Uteroglobin PF01099.17 ORF149585 - 0.16 12.3 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 Uteroglobin family Herpes_capsid PF06112.11 ORF1495 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF1494 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Myosin_TH1 PF06017.13 ORF148769 - 5.6e-12 45.7 4.1 5.7e-11 42.4 1.9 2.0 1 1 1 2 2 2 2 Unconventional myosin tail, actin- and lipid-binding Pkinase PF00069.25 ORF147917 - 8.8e-15 54.8 0.0 1.2e-14 54.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF147917 - 6.1e-06 25.8 0.0 7.8e-06 25.4 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_Tyr PF07714.17 ORF147917 - 0.00041 19.7 0.0 0.00055 19.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase MdcG PF10620.9 ORF147866 - 0.0024 17.7 0.1 0.0032 17.3 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl-dephospho-CoA transferase MdcG DUF2844 PF11005.8 ORF147866 - 0.095 12.7 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2844) TGBp3 PF02495.17 ORF147567 - 0.8 9.4 4.0 2.8 7.7 4.3 1.7 1 1 0 1 1 1 0 Triple gene block 3 SPACA9 PF15120.6 ORF147174 - 0.012 15.4 4.9 0.018 14.8 4.9 1.3 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 DUF2508 PF10704.9 ORF147174 - 0.031 14.4 7.9 0.031 14.4 7.9 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF2508) ERM PF00769.19 ORF147174 - 0.16 11.8 27.1 0.34 10.7 27.1 1.5 1 1 0 1 1 1 0 Ezrin/radixin/moesin family STN1_2 PF09170.10 ORF147174 - 0.35 11.1 11.5 0.43 10.8 11.5 1.1 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 DUF3584 PF12128.8 ORF147174 - 0.45 8.0 22.4 0.56 7.7 22.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Yuri_gagarin PF15934.5 ORF147174 - 0.74 9.6 18.7 2.2 8.0 18.9 1.6 1 1 0 1 1 1 0 Yuri gagarin KxDL PF10241.9 ORF147174 - 0.94 9.8 17.1 0.45 10.8 7.4 2.5 1 1 0 2 2 2 0 Uncharacterized conserved protein CC2-LZ PF16516.5 ORF147174 - 1.5 9.3 24.6 2.1 8.7 13.1 2.3 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF2570 PF10828.8 ORF147174 - 1.7 8.5 20.9 0.47 10.3 12.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) HIP1_clath_bdg PF16515.5 ORF147174 - 2.1 9.0 25.4 4.5 7.9 3.1 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Atg14 PF10186.9 ORF147174 - 2.2 7.3 25.9 3.9 6.5 8.3 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF147174 - 2.6 6.8 26.9 4 6.2 26.9 1.3 1 1 0 1 1 1 0 Spc7 kinetochore protein CorA PF01544.18 ORF147174 - 3.3 7.0 10.6 4.5 6.5 9.9 1.5 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein PTS_IIA PF02255.16 ORF147174 - 3.7 7.7 11.3 0.34 11.0 5.8 2.1 2 1 1 3 3 3 0 PTS system, Lactose/Cellobiose specific IIA subunit TEX13 PF15186.6 ORF147174 - 3.8 7.2 14.5 5.6 6.6 13.8 1.6 1 1 1 2 2 2 0 Testis-expressed sequence 13 protein family Mod_r PF07200.13 ORF147174 - 4.1 7.5 26.6 0.1 12.7 17.1 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein GAS PF13851.6 ORF147174 - 4.2 6.7 33.3 0.69 9.2 24.3 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Fib_alpha PF08702.10 ORF147174 - 4.4 7.5 21.2 2.7 8.2 10.3 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Golgin_A5 PF09787.9 ORF147174 - 4.9 6.5 23.9 9 5.7 23.9 1.4 1 1 0 1 1 1 0 Golgin subfamily A member 5 LPD5 PF18799.1 ORF147174 - 5 7.5 17.0 11 6.5 17.0 1.6 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 Sulfatase_C PF14707.6 ORF147174 - 8 7.2 9.2 16 6.2 4.4 2.4 1 1 1 2 2 2 0 C-terminal region of aryl-sulfatase BST2 PF16716.5 ORF147174 - 8.1 7.1 23.1 8.1 7.1 13.6 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 FapA PF03961.13 ORF147174 - 8.9 4.8 25.8 3.9 6.0 16.7 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A TMEM239 PF15841.5 ORF146546 - 0.43 10.5 3.5 0.67 9.8 3.5 1.2 1 0 0 1 1 1 0 Transmembrane protein 239 family FAM221 PF14753.6 ORF145384 - 0.35 10.4 11.4 0.44 10.1 11.4 1.1 1 0 0 1 1 1 0 Protein FAM221A/B Herpes_capsid PF06112.11 ORF145155 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF145154 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein IL10 PF00726.17 ORF144940 - 0.15 11.6 1.2 2.5 7.6 0.1 2.6 2 1 1 3 3 3 0 Interleukin 10 TGBp3 PF02495.17 ORF144294 - 0.8 9.4 4.0 2.8 7.7 4.3 1.7 1 1 0 1 1 1 0 Triple gene block 3 Tachykinin PF02202.16 ORF143154 - 0.11 12.5 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 Tachykinin family PPP4R2 PF09184.11 ORF14314 - 0.013 15.1 29.9 0.015 14.9 29.9 1.1 1 0 0 1 1 1 0 PPP4R2 BUD22 PF09073.10 ORF14314 - 0.018 14.4 29.3 0.019 14.3 29.3 1.2 1 0 0 1 1 1 0 BUD22 CDC27 PF09507.10 ORF14314 - 0.15 11.4 30.9 0.2 11.0 30.9 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 SDA1 PF05285.12 ORF14314 - 0.56 9.6 31.6 0.69 9.3 31.6 1.3 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF14314 - 0.65 8.1 34.0 0.68 8.1 34.0 1.1 1 0 0 1 1 1 0 Nop14-like family CNDH2_C PF16858.5 ORF14314 - 1.4 8.7 14.6 1.6 8.5 14.6 1.1 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term DUF913 PF06025.12 ORF14314 - 1.5 7.7 12.0 1.7 7.6 12.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) TFIIA PF03153.13 ORF14314 - 3.8 7.4 34.3 4.7 7.1 34.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit NPR3 PF03666.13 ORF14314 - 5.6 5.6 13.6 5.3 5.7 13.6 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 YqfD PF06898.11 ORF142118 - 0.042 12.7 0.4 0.057 12.2 0.4 1.1 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD IncE PF17627.2 ORF141980 - 0.23 11.4 5.5 0.18 11.9 3.0 2.0 1 1 1 2 2 2 0 Inclusion membrane protein E SCP2 PF02036.17 ORF141609 - 4.8e-28 97.6 1.1 6e-28 97.3 1.1 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF141609 - 3.2e-07 30.7 0.1 4e-07 30.4 0.1 1.1 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal ATP-synt_C PF00137.21 ORF140891 - 5.6e-15 55.4 5.8 5.8e-15 55.4 4.8 1.5 2 0 0 2 2 2 1 ATP synthase subunit C HA2 PF04408.23 ORF140037 - 0.17 12.2 5.7 0.24 11.7 5.5 1.4 1 1 0 1 1 1 0 Helicase associated domain (HA2) DDHD PF02862.17 ORF140037 - 0.2 11.8 6.5 0.22 11.6 6.5 1.1 1 0 0 1 1 1 0 DDHD domain Zip PF02535.22 ORF140037 - 0.35 10.0 2.7 0.36 10.0 2.7 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter RR_TM4-6 PF06459.12 ORF140037 - 0.46 10.3 13.6 0.5 10.2 13.6 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 EOS1 PF12326.8 ORF140037 - 0.55 10.1 2.2 0.55 10.1 2.2 1.2 1 0 0 1 1 1 0 N-glycosylation protein Presenilin PF01080.17 ORF140037 - 2.3 6.9 7.5 2.3 6.9 7.5 1.1 1 0 0 1 1 1 0 Presenilin Vfa1 PF08432.10 ORF140037 - 4 7.7 25.1 1.2 9.4 22.8 1.4 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 zf-NF-X1 PF01422.17 ORF138454 - 1.6 8.9 9.5 0.11 12.6 3.6 2.2 2 0 0 2 2 2 0 NF-X1 type zinc finger MIT PF04212.18 ORF138411 - 0.00014 21.8 0.0 0.00025 21.1 0.0 1.5 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain HTH_15 PF12324.8 ORF138411 - 0.12 12.4 0.1 1.5 8.8 0.0 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase PRMT5_C PF17286.2 ORF137598 - 0.034 14.0 0.3 0.034 14.0 0.3 1.2 1 0 0 1 1 1 0 PRMT5 oligomerisation domain GNT-I PF03071.15 ORF137360 - 0.0014 17.5 1.0 0.0014 17.5 1.0 1.1 1 0 0 1 1 1 1 GNT-I family DUF2252 PF10009.9 ORF137360 - 0.16 11.0 2.8 0.16 11.0 2.8 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) IPPT PF01715.17 ORF137360 - 0.92 9.3 8.3 6 6.6 0.0 2.2 1 1 1 2 2 2 0 IPP transferase OmpH PF03938.14 ORF137360 - 1.6 9.1 17.9 2.8 8.3 17.9 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Peptidase_M16 PF00675.20 ORF137360 - 3.1 7.8 6.8 31 4.5 6.7 2.0 1 1 1 2 2 2 0 Insulinase (Peptidase family M16) EMC3_TMCO1 PF01956.16 ORF137360 - 4.4 7.0 5.1 7 6.4 5.1 1.5 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF515 PF04415.12 ORF137360 - 4.7 5.5 8.7 6.2 5.1 8.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) AAA_23 PF13476.6 ORF137360 - 5.3 7.5 18.6 7.6 7.0 18.6 1.2 1 0 0 1 1 1 0 AAA domain RRM_3 PF08777.11 ORF136662 - 0.1 12.7 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 RNA binding motif FAM27 PF15832.5 ORF136662 - 2 9.0 12.7 7.3 7.2 12.7 2.0 1 1 0 1 1 1 0 FAM27 D and E protein family DUF3648 PF12364.8 ORF136377 - 0.012 15.9 0.1 0.019 15.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3648) DUF5537 PF17690.1 ORF136369 - 0.029 14.0 0.6 0.2 11.3 0.4 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5537) Ank_5 PF13857.6 ORF135268 - 1.1e-15 57.5 0.0 3e-07 30.6 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF135268 - 1.2e-14 54.6 0.2 2e-14 53.9 0.2 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF135268 - 6e-13 48.6 0.0 9.5e-06 25.8 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF135268 - 1e-12 48.3 0.0 2.1e-12 47.3 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF135268 - 4e-12 45.2 0.0 3.7e-05 23.8 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeat DUF3747 PF12565.8 ORF135268 - 0.14 11.5 0.1 0.32 10.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3747) TGBp3 PF02495.17 ORF133826 - 0.8 9.4 4.0 2.8 7.7 4.3 1.7 1 1 0 1 1 1 0 Triple gene block 3 RskA PF10099.9 ORF133142 - 0.47 10.7 8.1 0.55 10.5 7.8 1.3 1 1 0 1 1 1 0 Anti-sigma-K factor rskA Exostosin PF03016.15 ORF132599 - 0.033 13.4 0.4 0.043 13.0 0.4 1.2 1 0 0 1 1 1 0 Exostosin family RBFA PF02033.18 ORF132264 - 0.038 14.5 0.7 0.064 13.7 0.6 1.5 1 1 0 1 1 1 0 Ribosome-binding factor A ATP-synt_E_2 PF08112.11 ORF132264 - 0.095 13.0 10.4 2.4 8.5 4.0 2.8 1 1 1 2 2 2 0 ATP synthase epsilon subunit CIDR1_gamma PF18562.1 ORF132264 - 0.78 9.9 0.1 0.78 9.9 0.1 2.8 3 1 1 4 4 4 0 Cysteine-Rich Interdomain Region 1 gamma DnaJ PF00226.31 ORF130960 - 1.7e-11 44.0 0.1 3.3e-11 43.2 0.1 1.3 1 0 0 1 1 1 1 DnaJ domain DASH_Spc19 PF08287.11 ORF130960 - 0.0027 17.6 0.3 0.004 17.0 0.3 1.3 1 0 0 1 1 1 1 Spc19 MADF_DNA_bdg PF10545.9 ORF130960 - 0.012 15.9 1.1 0.028 14.7 1.1 1.7 1 1 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like NEMO PF11577.8 ORF130960 - 0.028 14.4 2.4 0.1 12.6 0.5 2.2 2 0 0 2 2 2 0 NF-kappa-B essential modulator NEMO TT_ORF2 PF02957.15 ORF130960 - 0.071 14.0 1.8 0.092 13.7 1.8 1.2 1 0 0 1 1 1 0 TT viral ORF2 RNase_J_C PF17770.1 ORF130005 - 0.13 13.3 2.6 7 7.8 0.1 3.0 1 1 0 2 2 2 0 Ribonuclease J C-terminal domain Herpes_capsid PF06112.11 ORF129373 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Herpes_capsid PF06112.11 ORF129372 - 0.55 10.3 6.1 0.8 9.8 6.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF3784 PF12650.7 ORF129164 - 0.017 15.3 7.6 0.097 12.9 3.7 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3784) MFS_1 PF07690.16 ORF129164 - 0.92 8.4 14.7 0.95 8.3 9.9 2.0 1 1 1 2 2 2 0 Major Facilitator Superfamily NP1-WLL PF11733.8 ORF128698 - 0.32 10.7 6.4 0.35 10.6 6.4 1.2 1 0 0 1 1 1 0 Non-capsid protein NP1 Thionin PF00321.17 ORF127902 - 1.1 9.8 6.0 2.7 8.6 1.8 2.3 2 0 0 2 2 2 0 Plant thionin Viral_P18 PF04521.13 ORF127883 - 0.019 14.8 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein NapE PF06796.11 ORF127736 - 0.057 12.9 0.5 0.1 12.1 0.5 1.4 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE PROL5-SMR PF15621.6 ORF127699 - 0.25 11.9 4.9 0.41 11.2 4.9 1.5 1 1 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Ribosomal_L27A PF00828.19 ORF126298 - 6.6e-23 81.8 0.2 9e-23 81.3 0.2 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MOSC PF03473.17 ORF125940 - 8 6.5 6.7 1.9 8.5 0.5 2.1 1 1 1 2 2 2 0 MOSC domain DUF4736 PF15883.5 ORF125178 - 2.3 7.9 4.6 0.83 9.3 2.3 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4736) Aldo_ket_red PF00248.21 ORF124045 - 0.016 14.4 0.2 0.018 14.2 0.2 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family DUF1639 PF07797.14 ORF122369 - 0.74 9.8 3.9 1.6 8.7 3.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) LRR_4 PF12799.7 ORF121977 - 3.2e-06 27.4 0.4 0.002 18.5 0.1 2.7 1 1 1 3 3 3 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF121977 - 1.1e-05 25.1 0.8 0.003 17.3 0.1 2.5 1 1 1 2 2 2 2 Leucine rich repeat LRR_6 PF13516.6 ORF121977 - 0.00043 20.1 0.2 3.6 7.9 0.0 3.4 3 0 0 3 3 3 2 Leucine Rich repeat LRR_1 PF00560.33 ORF121977 - 0.037 14.5 0.6 28 5.8 0.0 3.9 1 1 1 2 2 2 0 Leucine Rich Repeat Ivy PF08816.11 ORF119878 - 0.018 15.2 0.9 0.025 14.8 0.1 1.7 2 0 0 2 2 2 0 Inhibitor of vertebrate lysozyme (Ivy) DUF1639 PF07797.14 ORF117578 - 0.74 9.8 3.9 1.6 8.7 3.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) Uteroglobin PF01099.17 ORF117370 - 0.16 12.3 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 Uteroglobin family DUF4808 PF16066.5 ORF116388 - 0.065 13.8 2.8 0.098 13.2 2.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4808) NinD PF17466.2 ORF116388 - 0.08 13.0 0.3 0.19 11.8 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function LysM PF01476.20 ORF115988 - 1e-14 54.3 0.0 2.2e-14 53.2 0.0 1.6 1 0 0 1 1 1 1 LysM domain BON PF04972.17 ORF115988 - 6.7e-10 39.1 3.6 1.1e-09 38.4 3.6 1.3 1 0 0 1 1 1 1 BON domain HMA PF00403.26 ORF115988 - 0.01 16.3 0.6 0.023 15.2 0.4 1.8 1 1 1 2 2 2 0 Heavy-metal-associated domain LA-virus_coat PF09220.10 ORF115988 - 0.13 10.9 0.0 0.15 10.6 0.0 1.1 1 0 0 1 1 1 0 L-A virus, major coat protein Glyco_hydr_30_2 PF14587.6 ORF115900 - 0.024 14.2 0.6 0.024 14.2 0.6 1.1 1 0 0 1 1 1 0 O-Glycosyl hydrolase family 30 Glyco_hydr_30_2 PF14587.6 ORF115166 - 0.024 14.2 0.6 0.024 14.2 0.6 1.1 1 0 0 1 1 1 0 O-Glycosyl hydrolase family 30 Phage_holin_3_7 PF05449.11 ORF114911 - 0.095 12.7 0.5 0.18 11.8 0.1 1.8 1 1 1 2 2 2 0 Putative 3TM holin, Phage_holin_3 Ribosomal_L36 PF00444.18 ORF113948 - 1e-18 67.3 9.0 1e-18 67.3 9.0 2.6 3 0 0 3 3 3 1 Ribosomal protein L36 DUF3228 PF11539.8 ORF10785 - 0.059 12.9 0.0 0.077 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3228) DB_JBP1 PF18526.1 ORF107754 - 0.017 15.1 0.3 0.036 14.0 0.3 1.7 1 1 0 1 1 1 0 Thymine dioxygenase JBP1 DNA-binding domain BRX PF08381.11 ORF107754 - 0.34 10.3 3.4 0.23 10.9 0.5 2.1 2 0 0 2 2 2 0 Transcription factor regulating root and shoot growth via Pin3 EamA PF00892.20 ORF107515 - 9.3e-09 35.6 10.5 1.1e-08 35.4 10.5 1.0 1 0 0 1 1 1 1 EamA-like transporter family PrgI PF12666.7 ORF107515 - 0.17 12.6 5.0 0.37 11.5 0.8 2.2 2 0 0 2 2 2 0 PrgI family protein PARP PF00644.20 ORF107010 - 0.043 13.4 0.1 0.3 10.7 0.1 2.0 1 1 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain NAD_binding_1 PF00175.21 ORF106422 - 0.0078 16.8 0.0 0.26 12.0 0.0 2.1 2 0 0 2 2 2 2 Oxidoreductase NAD-binding domain BCIP PF13862.6 ORF104727 - 0.34 10.7 6.0 0.49 10.2 6.0 1.2 1 0 0 1 1 1 0 p21-C-terminal region-binding protein Ion_trans PF00520.31 ORF104302 - 6.3e-08 32.1 12.4 7.9e-08 31.8 12.4 1.1 1 0 0 1 1 1 1 Ion transport protein NKAIN PF05640.14 ORF104302 - 9.3e-05 21.8 0.3 0.00011 21.5 0.3 1.1 1 0 0 1 1 1 1 Na,K-Atpase Interacting protein Nucleoside_tran PF01733.18 ORF104302 - 0.0056 16.1 1.5 0.0066 15.9 1.5 1.2 1 0 0 1 1 1 1 Nucleoside transporter SID-1_RNA_chan PF13965.6 ORF104302 - 0.0083 14.6 2.4 0.0098 14.4 2.4 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 Mem_trans PF03547.18 ORF104302 - 0.046 12.1 0.9 0.052 11.9 0.9 1.0 1 0 0 1 1 1 0 Membrane transport protein DUF4834 PF16118.5 ORF104302 - 1.1 10.3 9.8 0.15 13.1 4.7 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) YMF19 PF02326.15 ORF104302 - 2.4 9.0 9.2 0.36 11.7 3.9 2.3 2 1 0 2 2 2 0 Plant ATP synthase F0 DUF4712 PF15830.5 ORF104247 - 0.08 12.6 0.6 0.11 12.2 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4712) NUC153 PF08159.12 ORF103975 - 0.0019 18.0 0.4 0.0035 17.1 0.4 1.4 1 0 0 1 1 1 1 NUC153 domain Auxin_canalis PF05703.11 ORF103123 - 0.046 13.7 0.1 0.05 13.5 0.1 1.1 1 0 0 1 1 1 0 Auxin canalisation Inhibitor_I24 PF10465.9 ORF100655 - 0.071 13.1 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 PinA peptidase inhibitor p450 PF00067.22 NODE_44739_length_442_cov_3.240786_g36990_i0reverse_frame_1 - 5.2e-26 91.4 0.0 5.9e-26 91.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 rRNA_processing PF08524.11 NODE_44733_length_442_cov_58.208845_g36984_i0forward_frame_1 - 2.4e-10 40.6 17.6 2.4e-10 40.6 17.6 1.6 2 0 0 2 2 2 1 rRNA processing MIF4G_like_2 PF09090.11 NODE_44733_length_442_cov_58.208845_g36984_i0forward_frame_1 - 0.061 12.8 2.4 0.071 12.6 2.4 1.1 1 0 0 1 1 1 0 MIF4G like Presenilin PF01080.17 NODE_44733_length_442_cov_58.208845_g36984_i0forward_frame_1 - 3.2 6.4 8.3 3.2 6.4 8.3 1.1 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 NODE_44733_length_442_cov_58.208845_g36984_i0forward_frame_1 - 6.3 5.0 15.7 7.4 4.7 15.7 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF3760 PF12586.8 NODE_44729_length_442_cov_64.186732_g36980_i0forward_frame_1 - 0.055 13.7 1.0 0.11 12.7 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3760) Phage_HK97_TLTM PF06120.11 NODE_44722_length_442_cov_78.855037_g36974_i0reverse_frame_1 - 0.25 10.5 7.5 0.019 14.2 2.2 1.6 1 1 1 2 2 2 0 Tail length tape measure protein Antimicrobial10 PF08105.11 NODE_44721_length_442_cov_81.692875_g36973_i0forward_frame_1 - 0.077 13.1 0.5 0.76 9.9 0.0 2.5 3 0 0 3 3 3 0 Metchnikowin family GATA PF00320.27 NODE_44710_length_442_cov_122.493857_g36962_i0reverse_frame_1 - 0.11 12.2 2.6 7.2 6.3 0.8 2.5 2 0 0 2 2 2 0 GATA zinc finger Cep57_CLD_2 PF14197.6 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.013 15.6 0.5 0.022 14.9 0.5 1.3 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 DinB PF05163.12 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.028 14.4 0.4 0.037 13.9 0.4 1.2 1 0 0 1 1 1 0 DinB family DUF2968 PF11180.8 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.031 13.9 4.4 0.038 13.6 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) TMCO5 PF14992.6 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.063 12.8 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 TMCO5 family ADIP PF11559.8 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.064 13.3 0.4 0.082 13.0 0.4 1.2 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding GAS PF13851.6 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.11 11.9 0.7 0.13 11.6 0.7 1.1 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding TPR_MLP1_2 PF07926.12 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.11 12.6 2.0 0.15 12.1 2.0 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein FUSC PF04632.12 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.53 8.8 3.4 0.59 8.6 3.4 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family KfrA_N PF11740.8 NODE_44700_length_442_cov_233.427518_g36952_i0reverse_frame_1 - 0.66 10.7 8.1 0.57 10.9 6.7 1.6 1 1 0 2 2 2 0 Plasmid replication region DNA-binding N-term Ribosomal_L32p PF01783.23 NODE_44695_length_442_cov_377.656020_g36947_i0forward_frame_1 - 0.035 14.4 0.1 0.06 13.6 0.1 1.4 1 0 0 1 1 1 0 Ribosomal L32p protein family ASFV_J13L PF05568.11 NODE_44695_length_442_cov_377.656020_g36947_i0forward_frame_1 - 0.11 12.2 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 African swine fever virus J13L protein Telomerase_RBD PF12009.8 NODE_44687_length_443_cov_1.899510_g36942_i0reverse_frame_1 - 0.088 12.9 0.1 0.093 12.8 0.1 1.2 1 0 0 1 1 1 0 Telomerase ribonucleoprotein complex - RNA binding domain DUF1543 PF07566.12 NODE_44684_length_443_cov_2.590686_g36939_i0reverse_frame_1 - 0.31 10.8 3.1 1.2 9.0 3.1 1.9 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1543) Hydrolase_3 PF08282.12 NODE_44683_length_443_cov_2.674020_g36938_i0forward_frame_1 - 2.7e-09 37.1 0.0 3.3e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF5383 PF17355.2 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 7.2e-05 23.2 0.3 9.2e-05 22.8 0.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5383) RIFIN PF02009.16 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.00014 21.8 3.6 0.00017 21.6 3.6 1.1 1 0 0 1 1 1 1 Rifin Orf78 PF06024.12 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.00061 20.0 0.1 0.00084 19.6 0.1 1.1 1 0 0 1 1 1 1 Orf78 (ac78) TMEM154 PF15102.6 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.0037 17.2 15.9 0.0049 16.8 15.9 1.1 1 0 0 1 1 1 1 TMEM154 protein family PRR18 PF15671.5 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.0044 16.9 9.7 0.0051 16.7 9.7 1.1 1 0 0 1 1 1 1 Proline-rich protein family 18 SP_C-Propep PF08999.10 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.017 14.9 5.2 0.022 14.5 4.2 1.7 2 0 0 2 2 2 0 Surfactant protein C, N terminal propeptide Renin_r PF07850.14 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.058 14.0 3.2 0.085 13.5 3.2 1.2 1 0 0 1 1 1 0 Renin receptor-like protein Peptidase_M56 PF05569.11 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.084 12.0 3.1 0.11 11.7 3.1 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 Amnionless PF14828.6 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.085 11.7 1.7 0.11 11.3 1.7 1.2 1 0 0 1 1 1 0 Amnionless Stevor PF17410.2 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.11 12.1 5.5 0.14 11.7 5.5 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame MGC-24 PF05283.11 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.11 12.9 12.4 0.16 12.4 12.4 1.3 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF3827 PF12877.7 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.14 10.5 1.5 0.14 10.5 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Glycophorin_A PF01102.18 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.14 12.4 6.9 0.21 11.9 6.9 1.1 1 0 0 1 1 1 0 Glycophorin A DUF5305 PF17231.2 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_1 - 0.15 11.4 10.7 0.2 11.1 10.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF2207 PF09972.9 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.071 11.9 2.5 0.079 11.7 2.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ceramidase PF05875.12 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.083 12.3 6.0 0.088 12.2 6.0 1.1 1 0 0 1 1 1 0 Ceramidase FA_desaturase PF00487.24 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.35 10.7 1.5 0.35 10.7 1.5 1.2 1 0 0 1 1 1 0 Fatty acid desaturase LMF1 PF06762.14 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.46 9.5 6.1 0.5 9.4 6.1 1.1 1 0 0 1 1 1 0 Lipase maturation factor ODV-E18 PF10717.9 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.72 9.8 19.5 8.6e+03 -3.3 19.5 2.4 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Trp_oprn_chp PF09534.10 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 0.73 9.6 17.1 0.93 9.3 17.1 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF1700 PF08006.11 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 2.6 7.5 12.7 3.5 7.1 12.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Pox_P21 PF05313.12 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_1 - 3.9 7.0 12.4 5.1 6.6 12.4 1.3 1 1 0 1 1 1 0 Poxvirus P21 membrane protein Spem1 PF15670.5 NODE_44678_length_443_cov_3.240196_g36933_i0forward_frame_1 - 4.7 6.7 9.6 6.5 6.3 9.6 1.2 1 0 0 1 1 1 0 Spermatid maturation protein 1 UPF0542 PF15086.6 NODE_44677_length_443_cov_3.676471_g36932_i0reverse_frame_1 - 0.076 13.0 1.5 0.17 11.8 1.5 1.6 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 Laminin_I PF06008.14 NODE_44676_length_443_cov_4.674020_g36931_i0reverse_frame_1 - 0.06 13.1 0.0 0.071 12.8 0.0 1.1 1 0 0 1 1 1 0 Laminin Domain I ACI44 PF15270.6 NODE_44669_length_443_cov_61.075980_g36924_i0reverse_frame_1 - 0.056 13.6 1.4 0.087 13.0 0.2 1.9 2 0 0 2 2 2 0 Metallo-carboxypeptidase inhibitor DUF4718 PF15842.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.0036 17.1 5.3 0.0038 17.1 5.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4718) Menin PF05053.13 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.014 13.8 10.5 0.015 13.7 10.5 1.0 1 0 0 1 1 1 0 Menin GAGA_bind PF06217.12 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.083 13.2 13.4 0.094 13.0 13.4 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family CPSF100_C PF13299.6 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.14 12.4 10.6 0.17 12.1 10.6 1.3 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal Vfa1 PF08432.10 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.21 11.9 20.4 0.29 11.5 20.4 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 CDC45 PF02724.14 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.27 9.5 14.3 0.29 9.4 14.3 1.1 1 0 0 1 1 1 0 CDC45-like protein RNA_pol_Rpc4 PF05132.14 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.36 11.3 13.7 0.5 10.8 13.7 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 GREB1 PF15782.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.4 7.8 10.2 0.4 7.7 10.2 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Apt1 PF10351.9 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.49 9.2 15.6 0.5 9.2 15.6 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain SRP-alpha_N PF04086.13 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.69 9.8 20.9 0.75 9.7 20.9 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal SAPS PF04499.15 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.7 8.6 9.2 0.74 8.5 9.2 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DDHD PF02862.17 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 0.77 9.9 8.8 0.94 9.6 8.8 1.2 1 0 0 1 1 1 0 DDHD domain Presenilin PF01080.17 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.1 8.0 14.0 1.2 7.9 14.0 1.1 1 0 0 1 1 1 0 Presenilin Connexin PF00029.19 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.1 8.9 8.1 1.2 8.8 8.1 1.2 1 0 0 1 1 1 0 Connexin XAP5 PF04921.14 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.2 8.9 18.2 1.7 8.4 18.2 1.2 1 0 0 1 1 1 0 XAP5, circadian clock regulator RR_TM4-6 PF06459.12 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.3 8.8 15.6 1.4 8.7 15.6 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Rtf2 PF04641.12 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 1.3 8.3 23.9 1.8 7.8 23.9 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger IHABP4_N PF16174.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 2.6 8.7 21.2 5.2 7.7 21.2 1.5 1 0 0 1 1 1 0 Intracellular hyaluronan-binding protein 4 N-terminal Hid1 PF12722.7 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 2.9 5.9 10.6 2.9 5.9 10.6 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Band_3_cyto PF07565.13 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 3.1 7.5 11.3 3.8 7.2 11.3 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain DUF755 PF05501.11 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 3.5 7.9 39.1 3.3 8.0 38.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF755) FancD2 PF14631.6 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 3.7 4.8 14.0 4.1 4.7 14.0 1.0 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease Neur_chan_memb PF02932.16 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 3.8 7.5 8.6 3.9 7.5 8.6 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4603 PF15376.6 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 4.5 4.5 17.2 5.3 4.3 17.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) NARP1 PF12569.8 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 4.6 6.0 17.4 5.2 5.9 17.4 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 VIR_N PF15912.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 4.6 6.7 10.0 5.2 6.6 10.0 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal DUF913 PF06025.12 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_1 - 4.8 6.0 9.3 5.1 6.0 9.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DIPSY PF11763.8 NODE_44646_length_443_cov_311.198529_g36901_i0forward_frame_1 - 0.06 13.5 0.0 0.092 12.9 0.0 1.3 1 0 0 1 1 1 0 Cell-wall adhesin ligand-binding C-terminal DAGK_cat PF00781.24 NODE_44626_length_444_cov_2.533007_g36881_i0reverse_frame_1 - 0.00034 20.2 0.0 0.00059 19.4 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain DUF4804 PF16062.5 NODE_44620_length_444_cov_3.139364_g36875_i0reverse_frame_1 - 0.15 10.9 0.0 0.18 10.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4804) HopJ PF08888.11 NODE_44616_length_444_cov_3.723716_g36871_i0forward_frame_1 - 0.063 13.5 0.5 0.12 12.6 0.5 1.5 1 0 0 1 1 1 0 HopJ type III effector protein Aldedh PF00171.22 NODE_44615_length_444_cov_3.779951_g36870_i0forward_frame_1 - 2.5e-08 32.9 0.7 1.2e-07 30.6 0.3 1.9 1 1 1 2 2 2 1 Aldehyde dehydrogenase family DUF4873 PF16170.5 NODE_44615_length_444_cov_3.779951_g36870_i0forward_frame_1 - 0.1 12.8 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4873) Nterm_IS4 PF13006.7 NODE_44614_length_444_cov_3.951100_g36869_i0forward_frame_1 - 1.5e-15 57.2 0.0 2.1e-15 56.6 0.0 1.3 1 0 0 1 1 1 1 Insertion element 4 transposase N-terminal DUF883 PF05957.13 NODE_44613_length_444_cov_4.449878_g36868_i0reverse_frame_1 - 0.045 14.3 0.3 0.097 13.3 0.0 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) VPS11_C PF12451.8 NODE_44613_length_444_cov_4.449878_g36868_i0reverse_frame_1 - 0.37 11.1 1.2 0.89 9.8 0.1 1.9 2 0 0 2 2 2 0 Vacuolar protein sorting protein 11 C terminal Connexin43 PF03508.13 NODE_44612_length_444_cov_6.537897_g36867_i0forward_frame_1 - 0.29 10.7 2.2 0.74 9.4 2.2 1.7 1 0 0 1 1 1 0 Gap junction alpha-1 protein (Cx43) IBR PF01485.21 NODE_44612_length_444_cov_6.537897_g36867_i0forward_frame_1 - 5.3 7.3 9.1 1.1 9.5 1.4 2.4 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain zf-C3HC4 PF00097.25 NODE_44612_length_444_cov_6.537897_g36867_i0forward_frame_1 - 6.4 6.7 8.4 0.4 10.6 1.5 2.5 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Peptidase_S9 PF00326.21 NODE_44600_length_444_cov_77.853301_g36855_i0forward_frame_1 - 1.9e-05 24.3 0.0 2.2e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 NODE_44600_length_444_cov_77.853301_g36855_i0forward_frame_1 - 0.0029 17.4 0.0 0.0033 17.3 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 NODE_44600_length_444_cov_77.853301_g36855_i0forward_frame_1 - 0.0063 15.8 0.0 0.017 14.4 0.0 1.7 2 0 0 2 2 2 1 Serine aminopeptidase, S33 PTPLA PF04387.14 NODE_44595_length_444_cov_89.606357_g36850_i0forward_frame_1 - 0.052 13.3 1.0 0.074 12.8 1.0 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA EF-hand_1 PF00036.32 NODE_44590_length_444_cov_100.740831_g36845_i0reverse_frame_1 - 1.4e-13 49.3 0.1 3.3e-06 26.3 0.2 2.6 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 NODE_44590_length_444_cov_100.740831_g36845_i0reverse_frame_1 - 4.3e-11 41.8 0.0 5.7e-06 25.9 0.0 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 NODE_44590_length_444_cov_100.740831_g36845_i0reverse_frame_1 - 8.5e-08 32.5 0.1 2.6e-07 31.0 0.1 1.8 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_44590_length_444_cov_100.740831_g36845_i0reverse_frame_1 - 4.2e-06 26.5 0.1 0.0092 15.8 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 NODE_44590_length_444_cov_100.740831_g36845_i0reverse_frame_1 - 4.5e-05 22.8 0.1 0.00082 18.8 0.2 2.3 2 0 0 2 2 2 1 EF hand EF-hand_10 PF14788.6 NODE_44590_length_444_cov_100.740831_g36845_i0reverse_frame_1 - 0.066 13.1 1.6 0.18 11.7 0.1 2.4 3 0 0 3 3 3 0 EF hand PIRT PF15099.6 NODE_44590_length_444_cov_100.740831_g36845_i0reverse_frame_1 - 0.072 12.7 0.1 0.095 12.3 0.1 1.2 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family CEBP_ZZ PF16366.5 NODE_44579_length_444_cov_204.753056_g35319_i1forward_frame_1 - 0.001 19.2 3.0 0.001 19.2 3.0 1.9 1 1 1 2 2 2 1 Cytoplasmic polyadenylation element-binding protein ZZ domain MitoNEET_N PF10660.9 NODE_44569_length_444_cov_9647.931540_g36826_i0reverse_frame_1 - 2.7 8.1 8.4 6.3 6.9 1.0 2.2 2 0 0 2 2 2 0 Iron-containing outer mitochondrial membrane protein N-terminus Collagen PF01391.18 NODE_44569_length_444_cov_9647.931540_g36826_i0forward_frame_1 - 6e-05 22.7 22.6 0.0064 16.2 10.3 2.2 1 1 1 2 2 2 2 Collagen triple helix repeat (20 copies) Nop14 PF04147.12 NODE_44569_length_444_cov_9647.931540_g36826_i0forward_frame_1 - 1.2 7.2 6.6 1.2 7.2 6.6 1.0 1 0 0 1 1 1 0 Nop14-like family Zip PF02535.22 NODE_44569_length_444_cov_9647.931540_g36826_i0forward_frame_1 - 3.5 6.8 4.0 4 6.6 4.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter VOMI PF03762.17 NODE_44565_length_445_cov_2.321951_g36822_i0reverse_frame_3 - 0.01 16.0 0.2 0.019 15.1 0.1 1.5 2 0 0 2 2 2 0 Vitelline membrane outer layer protein I (VOMI) Toxin_2 PF00451.19 NODE_44565_length_445_cov_2.321951_g36822_i0forward_frame_3 - 5.4 7.4 8.8 3.8 7.9 0.2 3.3 3 0 0 3 3 3 0 Scorpion short toxin, BmKK2 Aminotran_1_2 PF00155.21 NODE_44563_length_445_cov_2.504878_g36820_i0forward_frame_2 - 6.6e-14 51.8 0.0 7.1e-14 51.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Fer4_11 PF13247.6 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 1.1e-29 102.5 10.6 1.3e-29 102.2 10.6 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 3.1e-10 40.5 14.9 8.4e-05 23.1 11.4 3.1 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 1.7e-09 37.7 14.9 9.5e-06 25.7 9.8 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 3.4e-09 36.2 19.4 3.8e-05 23.5 2.6 3.4 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4 PF00037.27 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 7.2e-09 35.1 26.7 9.5e-08 31.5 4.7 4.6 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 2.7e-07 30.3 31.0 1.5e-06 28.0 4.3 4.0 3 1 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 2.8e-07 30.6 23.3 9.7e-06 25.6 11.9 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 1.3e-06 28.9 28.1 0.0076 17.1 5.3 3.3 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4_16 PF13484.6 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 3.6e-06 27.8 14.2 0.058 14.3 0.1 3.7 2 1 2 4 4 4 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 4.3e-05 23.7 25.9 0.0048 17.3 3.1 3.4 3 1 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 0.028 14.9 19.2 0.77 10.3 0.8 3.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 0.029 14.5 11.6 0.029 14.5 11.6 3.1 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 NODE_44562_length_445_cov_2.534146_g36819_i0forward_frame_3 - 0.21 12.1 18.7 0.62 10.5 0.3 3.2 2 1 0 2 2 2 0 4Fe-4S dicluster domain AA_permease PF00324.21 NODE_44560_length_445_cov_2.724390_g36817_i0forward_frame_3 - 5.5e-15 54.9 0.1 5.5e-15 54.9 0.1 1.5 2 0 0 2 2 2 1 Amino acid permease zf-RING_2 PF13639.6 NODE_44559_length_445_cov_2.802439_g36816_i0forward_frame_3 - 6 7.3 14.5 0.14 12.5 5.4 2.4 2 0 0 2 2 2 0 Ring finger domain zf-C2H2 PF00096.26 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 3.2e-06 27.3 10.3 5.1e-05 23.5 0.2 3.3 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 3.7e-05 24.2 4.0 0.00061 20.4 0.2 2.7 2 0 0 2 2 2 1 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 0.0017 18.7 11.3 0.0075 16.7 0.1 3.4 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_6 PF13912.6 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 0.018 15.0 0.6 0.018 15.0 0.6 1.9 2 0 0 2 2 2 0 C2H2-type zinc finger DUF1677 PF07911.13 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 0.049 14.0 0.2 0.079 13.4 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1677) PAPS_reduct PF01507.19 NODE_44558_length_445_cov_2.868293_g36815_i0reverse_frame_3 - 0.18 11.8 2.3 0.17 11.9 0.8 1.7 1 1 1 2 2 2 0 Phosphoadenosine phosphosulfate reductase family Ac76 PF05814.11 NODE_44558_length_445_cov_2.868293_g36815_i0forward_frame_3 - 1.2 9.2 10.8 0.066 13.2 2.0 2.2 2 0 0 2 2 2 0 Orf76 (Ac76) DUF4773 PF15998.5 NODE_44553_length_445_cov_5.329268_g36810_i0reverse_frame_3 - 0.0017 18.9 7.0 0.018 15.5 0.1 2.2 1 1 1 2 2 2 2 Domain of unknown function (DUF4773) BAP PF06639.11 NODE_44553_length_445_cov_5.329268_g36810_i0reverse_frame_3 - 0.42 11.0 10.3 0.71 10.2 0.4 2.4 1 1 1 2 2 2 0 Basal layer antifungal peptide (BAP) DUF4573 PF15140.6 NODE_44553_length_445_cov_5.329268_g36810_i0reverse_frame_2 - 0.0025 17.6 5.0 0.0031 17.3 5.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4573) SPATA3 PF15662.5 NODE_44553_length_445_cov_5.329268_g36810_i0reverse_frame_2 - 0.15 12.7 10.0 0.2 12.3 10.0 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family Pea-VEAacid PF08111.11 NODE_44553_length_445_cov_5.329268_g36810_i0forward_frame_3 - 0.03 14.6 8.9 16 6.1 0.1 4.9 4 0 0 4 4 4 0 Pea-VEAacid family MyTH4 PF00784.17 NODE_44551_length_445_cov_17.802439_g36808_i0reverse_frame_3 - 0.6 10.6 6.6 0.17 12.4 0.7 2.0 1 1 1 2 2 2 0 MyTH4 domain DUF2070 PF09843.9 NODE_44549_length_445_cov_41.856098_g36806_i0reverse_frame_2 - 7.1 4.8 9.1 8.7 4.5 9.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MAAL_N PF05034.13 NODE_44549_length_445_cov_41.856098_g36806_i0forward_frame_3 - 0.019 14.6 0.0 0.025 14.2 0.0 1.2 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus DNA_ligase_ZBD PF03119.16 NODE_44543_length_445_cov_77.085366_g36800_i0reverse_frame_3 - 0.12 12.5 4.3 0.22 11.6 0.5 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain DUF5461 PF17545.2 NODE_44540_length_445_cov_80.048780_g36797_i0forward_frame_3 - 0.0047 17.2 0.5 0.0085 16.4 0.1 1.6 2 0 0 2 2 2 1 Family of unknown function (DUF5461) ribosomal_L24 PF17136.4 NODE_44540_length_445_cov_80.048780_g36797_i0forward_frame_2 - 0.054 13.9 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 zf-rbx1 PF12678.7 NODE_44532_length_445_cov_147.992683_g36654_i1forward_frame_3 - 0.00018 21.7 0.2 0.00018 21.7 0.2 1.8 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_44532_length_445_cov_147.992683_g36654_i1forward_frame_3 - 0.012 15.9 0.2 0.012 15.9 0.2 1.9 2 0 0 2 2 2 0 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_44532_length_445_cov_147.992683_g36654_i1forward_frame_3 - 0.04 13.8 0.1 0.04 13.8 0.1 1.8 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_44532_length_445_cov_147.992683_g36654_i1forward_frame_3 - 0.046 13.8 0.1 0.099 12.7 0.1 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 NODE_44532_length_445_cov_147.992683_g36654_i1forward_frame_3 - 0.051 13.7 0.2 0.12 12.5 0.2 1.6 1 0 0 1 1 1 0 RING-variant domain TRAM1 PF08390.11 NODE_44531_length_445_cov_161.163415_g36789_i0forward_frame_2 - 1.2 8.9 4.5 2.2 8.0 4.5 1.3 1 0 0 1 1 1 0 TRAM1-like protein PAN_4 PF14295.6 NODE_44530_length_445_cov_178.675610_g36788_i0reverse_frame_2 - 0.19 11.7 8.1 2.1 8.3 5.1 2.5 2 0 0 2 2 2 0 PAN domain RbpA PF13397.6 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_3 - 0.02 15.5 0.6 0.045 14.4 0.2 1.8 2 0 0 2 2 2 0 RNA polymerase-binding protein EF-hand_7 PF13499.6 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 1.8e-07 31.5 0.0 4.2e-06 27.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 2.1e-07 30.3 0.0 5.5e-06 25.9 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 1.7e-06 27.8 0.1 0.00036 20.3 0.0 3.0 2 2 1 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 2e-06 26.9 0.1 6.6e-05 22.2 0.0 2.7 3 0 0 3 3 3 1 EF hand EF-hand_5 PF13202.6 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 2.8e-05 23.4 0.2 0.00017 20.9 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_11 PF08976.11 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 0.0003 21.6 0.0 0.00065 20.5 0.0 1.5 1 1 1 2 2 2 1 EF-hand domain Laps PF10169.9 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 0.0064 17.1 3.6 0.0064 17.1 3.6 1.6 1 1 1 2 2 2 1 Learning-associated protein Peptidase_S46 PF10459.9 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 0.033 12.9 2.0 0.037 12.7 2.0 1.1 1 0 0 1 1 1 0 Peptidase S46 CoA_transf_3 PF02515.17 NODE_44530_length_445_cov_178.675610_g36788_i0forward_frame_2 - 0.081 12.0 0.1 0.1 11.7 0.1 1.3 1 1 0 1 1 1 0 CoA-transferase family III DUF4160 PF13711.6 NODE_44529_length_445_cov_187.746341_g36787_i0reverse_frame_2 - 2.5 8.5 8.6 0.12 12.7 1.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4160) LPD14 PF18827.1 NODE_44525_length_445_cov_253.021951_g36783_i0forward_frame_2 - 0.0063 16.8 0.4 0.0083 16.4 0.4 1.2 1 0 0 1 1 1 1 Large polyvalent protein-associated domain 14 CBM_14 PF01607.24 NODE_44525_length_445_cov_253.021951_g36783_i0forward_frame_2 - 0.099 12.8 1.4 0.17 12.1 1.4 1.3 1 0 0 1 1 1 0 Chitin binding Peritrophin-A domain DASH_Duo1 PF08651.10 NODE_44525_length_445_cov_253.021951_g36783_i0forward_frame_2 - 0.5 10.2 3.5 1.4 8.7 0.4 2.4 1 1 1 3 3 3 0 DASH complex subunit Duo1 DUF5586 PF17824.1 NODE_44520_length_445_cov_310.951220_g36778_i0reverse_frame_2 - 0.016 14.4 0.6 0.018 14.2 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5586) DUF5582 PF17819.1 NODE_44520_length_445_cov_310.951220_g36778_i0reverse_frame_2 - 0.062 13.7 0.3 0.11 13.0 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5582) Spc7 PF08317.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.00068 18.6 11.2 0.00079 18.4 11.2 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.00073 19.8 9.3 0.00095 19.4 9.3 1.2 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 FliD_C PF07195.12 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.00086 18.8 4.6 0.0092 15.4 1.1 2.1 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus YbfN PF13982.6 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.0015 18.8 0.6 0.0044 17.3 0.1 2.0 1 1 1 2 2 2 1 YbfN-like lipoprotein BRE1 PF08647.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.0027 17.7 5.5 0.0027 17.7 5.5 2.0 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase DUF4164 PF13747.6 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.02 15.1 1.5 0.029 14.7 1.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) LCD1 PF09798.9 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.022 13.3 12.2 0.025 13.1 12.2 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein Bacillus_HBL PF05791.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.027 14.3 7.6 0.045 13.6 7.6 1.4 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) ADIP PF11559.8 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.04 14.0 11.3 0.72 9.9 11.1 2.1 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.049 12.9 5.6 0.071 12.4 5.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) FlaC_arch PF05377.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.082 13.3 1.0 0.082 13.3 1.0 2.8 1 1 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF1974 PF09317.11 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.19 11.3 3.3 0.22 11.1 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) ABC_tran_CTD PF16326.5 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.21 11.9 8.9 0.14 12.4 6.2 2.0 1 1 2 3 3 3 0 ABC transporter C-terminal domain LCIB_C_CA PF18599.1 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.28 10.5 1.9 0.37 10.1 1.9 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases V_ATPase_I PF01496.19 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.74 7.7 7.8 0.8 7.5 7.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1043 PF06295.12 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.85 9.6 8.8 9.5 6.3 8.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) YabA PF06156.13 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 0.92 10.2 7.1 1.7 9.3 6.6 1.7 1 1 1 2 2 2 0 Initiation control protein YabA APG6_N PF17675.1 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 1.6 9.2 14.2 0.15 12.6 6.9 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region BST2 PF16716.5 NODE_44508_length_445_cov_1167.551220_g36769_i0forward_frame_2 - 2.2 8.9 10.0 0.2 12.3 3.5 2.2 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 SecE PF00584.20 NODE_44507_length_445_cov_2416.295122_g36768_i0reverse_frame_3 - 0.00092 19.1 1.1 0.00092 19.1 1.1 1.7 2 0 0 2 2 2 1 SecE/Sec61-gamma subunits of protein translocation complex Herpes_IE2_3 PF03361.14 NODE_44500_length_446_cov_1.854015_g36763_i0reverse_frame_2 - 0.026 14.4 0.1 0.034 14.0 0.1 1.2 1 0 0 1 1 1 0 Herpes virus intermediate/early protein 2/3 SlyX PF04102.12 NODE_44499_length_446_cov_1.992701_g36762_i0forward_frame_2 - 0.037 14.7 4.4 0.26 12.0 4.4 2.1 1 1 0 1 1 1 0 SlyX Methyltrans_SAM PF10672.9 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 9.7e-27 93.9 0.0 1.2e-26 93.6 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Cons_hypoth95 PF03602.15 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 3.5e-13 49.6 0.0 4.6e-13 49.2 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 1.8e-08 34.3 0.0 2.3e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 2.3e-06 28.2 0.0 3.1e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 6.6e-06 25.8 0.0 8.5e-06 25.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_15 PF09445.10 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 2e-05 24.2 0.0 2.6e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 4.6e-05 23.3 0.0 5.6e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 7.5e-05 22.3 0.0 8.9e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.0002 21.9 0.0 0.00035 21.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TRM PF02005.16 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.00035 19.9 0.0 0.00045 19.5 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_12 PF08242.12 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.02 15.6 0.0 0.027 15.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.075 12.7 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltr_RsmB-F PF01189.17 NODE_44487_length_446_cov_3.180049_g36750_i0reverse_frame_3 - 0.1 12.3 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F DUF3907 PF13047.6 NODE_44485_length_446_cov_3.790754_g36748_i0reverse_frame_3 - 0.12 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3907) GrpE PF01025.19 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.002 17.8 1.0 0.0077 15.9 0.2 1.8 1 1 1 2 2 2 1 GrpE DUF1706 PF08020.11 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.0045 16.9 0.4 0.0081 16.1 0.4 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF1706) TACC_C PF05010.14 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.0061 16.4 0.8 0.0061 16.4 0.8 1.8 2 1 0 2 2 2 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF16 PF01519.16 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.0069 16.9 0.4 0.013 15.9 0.4 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF16 Cnd1 PF12717.7 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.056 13.5 2.3 0.091 12.8 2.3 1.5 1 1 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 FlaC_arch PF05377.11 NODE_44483_length_446_cov_4.596107_g36746_i0reverse_frame_2 - 0.093 13.1 6.7 0.87 10.0 3.0 2.7 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) SLIDE PF09111.10 NODE_44483_length_446_cov_4.596107_g36746_i0forward_frame_2 - 0.089 12.8 0.2 0.15 12.1 0.2 1.4 1 0 0 1 1 1 0 SLIDE LRV_FeS PF05484.11 NODE_44482_length_446_cov_5.060827_g36745_i0reverse_frame_3 - 0.18 11.8 2.3 13 5.9 0.6 2.5 1 1 1 2 2 2 0 LRV protein FeS4 cluster Pex24p PF06398.11 NODE_44481_length_446_cov_32.226277_g36744_i0forward_frame_2 - 0.93 8.4 5.4 0.95 8.4 5.4 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Tcp10_C PF07202.13 NODE_44478_length_446_cov_46.053528_g36741_i0forward_frame_2 - 1.6e-07 31.4 0.1 5e-07 29.8 0.1 1.9 1 1 0 1 1 1 1 T-complex protein 10 C-terminus MORN_2 PF07661.13 NODE_44478_length_446_cov_46.053528_g36741_i0forward_frame_2 - 0.011 15.8 0.5 1.9 9.0 0.0 3.6 2 1 2 4 4 4 0 MORN repeat variant ATP-synt_J PF04911.12 NODE_44476_length_446_cov_49.216545_g36739_i0forward_frame_3 - 0.0077 15.8 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 ATP synthase j chain bMG1 PF17970.1 NODE_44458_length_446_cov_88.593674_g36722_i0reverse_frame_2 - 0.096 12.8 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG1 domain U71 PF17474.2 NODE_44452_length_446_cov_99.143552_g36716_i0reverse_frame_2 - 0.1 12.6 1.3 0.19 11.7 1.3 1.4 1 0 0 1 1 1 0 Tegument protein UL11 homolog TBD PF12845.7 NODE_44447_length_446_cov_200.902676_g36712_i0reverse_frame_3 - 0.047 13.6 0.2 0.079 12.9 0.2 1.2 1 0 0 1 1 1 0 TBD domain FPL PF09758.9 NODE_44447_length_446_cov_200.902676_g36712_i0forward_frame_3 - 0.13 12.2 0.1 0.18 11.8 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein DUF842 PF05811.13 NODE_44447_length_446_cov_200.902676_g36712_i0forward_frame_2 - 0.074 12.7 1.4 0.1 12.3 1.4 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) DUF4934 PF16288.5 NODE_44437_length_446_cov_2502.917275_g36702_i0forward_frame_2 - 0.012 15.5 0.2 0.021 14.8 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4934) DNA_repr_REX1B PF14966.6 NODE_44437_length_446_cov_2502.917275_g36702_i0forward_frame_2 - 0.029 15.0 0.1 0.037 14.7 0.1 1.2 1 0 0 1 1 1 0 DNA repair REX1-B DUF2671 PF10877.8 NODE_44435_length_446_cov_2660.233577_g36700_i0reverse_frame_3 - 0.022 14.5 0.7 0.052 13.4 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) ABC_export PF16962.5 NODE_44435_length_446_cov_2660.233577_g36700_i0reverse_frame_2 - 0.0082 14.6 2.3 0.01 14.3 2.3 1.1 1 0 0 1 1 1 1 Putative ABC exporter CPCFC PF17223.3 NODE_44429_length_447_cov_2.223301_g36694_i0reverse_frame_3 - 0.004 16.9 1.1 0.0079 15.9 1.1 1.5 1 0 0 1 1 1 1 Cuticle protein CPCFC Orbi_NS3 PF01616.16 NODE_44429_length_447_cov_2.223301_g36694_i0reverse_frame_2 - 0.062 13.0 0.0 0.083 12.6 0.0 1.4 1 0 0 1 1 1 0 Orbivirus NS3 DUF3804 PF12707.7 NODE_44429_length_447_cov_2.223301_g36694_i0forward_frame_2 - 0.12 12.1 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3804) zf-C3Hc3H PF13891.6 NODE_44427_length_447_cov_2.453883_g36692_i0reverse_frame_3 - 1.1 9.6 7.9 25 5.3 4.4 2.5 2 1 0 2 2 2 0 Potential DNA-binding domain Polysacc_synt_C PF14667.6 NODE_44426_length_447_cov_2.485437_g36691_i0forward_frame_3 - 0.0023 18.0 9.5 0.0032 17.5 9.5 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain SUR7 PF06687.12 NODE_44426_length_447_cov_2.485437_g36691_i0forward_frame_3 - 0.63 9.6 14.4 0.95 9.1 14.3 1.4 1 1 0 1 1 1 0 SUR7/PalI family SHR3_chaperone PF08229.11 NODE_44426_length_447_cov_2.485437_g36691_i0forward_frame_3 - 1.8 7.5 6.8 1 8.3 4.8 1.5 1 1 0 1 1 1 0 ER membrane protein SH3 Presenilin PF01080.17 NODE_44426_length_447_cov_2.485437_g36691_i0forward_frame_3 - 1.9 7.2 7.5 2.4 6.8 7.5 1.3 1 0 0 1 1 1 0 Presenilin Gtr1_RagA PF04670.12 NODE_44425_length_447_cov_2.582524_g36690_i0forward_frame_2 - 1.7e-17 63.6 0.8 2.3e-17 63.2 0.8 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Redoxin PF08534.10 NODE_44424_length_447_cov_2.616505_g36689_i0forward_frame_2 - 0.13 12.0 0.6 0.19 11.4 0.6 1.2 1 0 0 1 1 1 0 Redoxin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks172.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks172.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks172.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks172.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase PF00069.25 NODE_44416_length_447_cov_3.359223_g36681_i0forward_frame_3 - 0.016 14.6 0.0 0.021 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain Flavodoxin_2 PF02525.17 NODE_44415_length_447_cov_3.473301_g36680_i0reverse_frame_2 - 1.2e-14 54.5 0.0 1.9e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold DUF3895 PF13034.6 NODE_44415_length_447_cov_3.473301_g36680_i0forward_frame_3 - 0.12 12.3 0.1 0.18 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3895) MCD PF05292.11 NODE_44412_length_447_cov_3.822816_g36677_i0forward_frame_2 - 0.0031 17.1 0.4 0.0039 16.8 0.4 1.1 1 0 0 1 1 1 1 Malonyl-CoA decarboxylase C-terminal domain Zip PF02535.22 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 0.14 11.4 2.2 0.16 11.1 2.2 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Spem1 PF15670.5 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 0.3 10.6 9.4 0.37 10.3 9.4 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 RPN2_C PF18004.1 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 0.6 10.0 12.5 0.78 9.6 12.5 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain EMC3_TMCO1 PF01956.16 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 1.1 9.0 3.6 1.6 8.4 3.6 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like NPR3 PF03666.13 NODE_44411_length_447_cov_3.922330_g5271_i4reverse_frame_3 - 7.1 5.3 14.6 7.9 5.2 14.6 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Spem1 PF15670.5 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 0.12 11.9 8.0 0.15 11.7 8.0 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 Zip PF02535.22 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 0.13 11.4 1.4 0.15 11.2 1.4 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter RPN2_C PF18004.1 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 0.37 10.7 11.1 0.48 10.3 11.1 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain NPR3 PF03666.13 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 2.6 6.7 11.1 2.8 6.6 11.1 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 EMC3_TMCO1 PF01956.16 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 3.7 7.3 5.1 5.9 6.6 5.1 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Presenilin PF01080.17 NODE_44410_length_447_cov_4.060680_g5271_i3reverse_frame_3 - 7 5.3 7.2 8.3 5.0 7.2 1.1 1 0 0 1 1 1 0 Presenilin zf-CGNR PF11706.8 NODE_44409_length_447_cov_4.152913_g36676_i0reverse_frame_3 - 2.1 8.2 5.7 9.5 6.2 1.4 2.7 2 0 0 2 2 2 0 CGNR zinc finger DUF2776 PF10951.8 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 1.7e-57 195.3 8.7 1.8e-57 195.2 8.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2776) NrsF PF06532.11 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.0023 17.7 5.8 0.003 17.3 5.8 1.2 1 0 0 1 1 1 1 Negative regulator of sigma F Sugar_transport PF06800.12 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.0047 16.3 3.4 0.0082 15.5 3.4 1.6 1 1 0 1 1 1 1 Sugar transport protein YtpI PF14007.6 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.007 16.5 1.9 0.0081 16.3 0.4 1.7 1 1 1 2 2 2 1 YtpI-like protein DUF4079 PF13301.6 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.45 10.7 10.7 0.2 11.8 2.4 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4079) AC_N PF16214.5 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 0.67 9.0 6.6 0.75 8.9 6.6 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF3671 PF12420.8 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 3.1 7.9 4.5 0.96 9.5 0.6 2.1 2 1 0 2 2 2 0 Protein of unknown function DUF4231 PF14015.6 NODE_44409_length_447_cov_4.152913_g36676_i0forward_frame_2 - 4.4 7.8 5.5 0.51 10.8 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) DUF1676 PF07898.13 NODE_44407_length_447_cov_5.033981_g36674_i0forward_frame_2 - 3.3 7.7 9.2 0.42 10.6 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1676) Myc_target_1 PF15179.6 NODE_44407_length_447_cov_5.033981_g36674_i0forward_frame_2 - 4 7.3 5.9 2.2 8.2 4.5 1.4 1 1 0 1 1 1 0 Myc target protein 1 DUF3810 PF12725.7 NODE_44407_length_447_cov_5.033981_g36674_i0forward_frame_2 - 5.2 6.3 6.2 7 5.9 6.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Hva1_TUDOR PF11160.8 NODE_44404_length_447_cov_16.995146_g36671_i0reverse_frame_2 - 0.038 14.2 1.2 0.075 13.2 1.2 1.6 1 0 0 1 1 1 0 Hypervirulence associated proteins TUDOR domain Na_K-ATPase PF00287.18 NODE_44404_length_447_cov_16.995146_g36671_i0reverse_frame_2 - 0.1 11.8 0.1 0.12 11.5 0.1 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Arc_trans_TRASH PF08394.10 NODE_44404_length_447_cov_16.995146_g36671_i0forward_frame_3 - 0.0062 16.8 0.6 0.013 15.8 0.6 1.5 1 0 0 1 1 1 1 Archaeal TRASH domain zf-H3C2 PF16721.5 NODE_44403_length_447_cov_52.859223_g36670_i0forward_frame_3 - 0.12 12.7 2.3 0.16 12.4 1.4 1.6 1 1 1 2 2 2 0 Zinc-finger like, probable DNA-binding MFS_1 PF07690.16 NODE_44403_length_447_cov_52.859223_g36670_i0forward_frame_2 - 0.0056 15.6 0.4 0.011 14.7 0.4 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily PGG PF13962.6 NODE_44403_length_447_cov_52.859223_g36670_i0forward_frame_2 - 0.04 13.7 0.1 0.11 12.3 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function Vpu PF00558.19 NODE_44403_length_447_cov_52.859223_g36670_i0forward_frame_2 - 0.28 11.0 2.6 1.3 8.9 0.5 2.1 2 0 0 2 2 2 0 Vpu protein DUF2985 PF11204.8 NODE_44403_length_447_cov_52.859223_g36670_i0forward_frame_2 - 1.1 9.5 4.4 0.77 9.9 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2985) Pkinase PF00069.25 NODE_44402_length_447_cov_54.609223_g36669_i0reverse_frame_2 - 4.2e-19 68.9 0.0 5.2e-19 68.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_44402_length_447_cov_54.609223_g36669_i0reverse_frame_2 - 8.5e-09 35.1 0.0 1.1e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase ETRAMP PF09716.10 NODE_44394_length_447_cov_84.752427_g36661_i0forward_frame_2 - 0.67 10.1 3.2 1.1 9.3 1.4 2.0 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) zf-rbx1 PF12678.7 NODE_44386_length_447_cov_147.242718_g36654_i0reverse_frame_3 - 0.00018 21.7 0.2 0.00018 21.7 0.2 1.9 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_44386_length_447_cov_147.242718_g36654_i0reverse_frame_3 - 0.012 15.9 0.2 0.012 15.9 0.2 1.9 2 0 0 2 2 2 0 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_44386_length_447_cov_147.242718_g36654_i0reverse_frame_3 - 0.04 13.8 0.1 0.04 13.8 0.1 1.8 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_44386_length_447_cov_147.242718_g36654_i0reverse_frame_3 - 0.046 13.8 0.1 0.099 12.7 0.1 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 NODE_44386_length_447_cov_147.242718_g36654_i0reverse_frame_3 - 0.052 13.7 0.2 0.12 12.5 0.2 1.6 1 0 0 1 1 1 0 RING-variant domain Glycos_transf_1 PF00534.20 NODE_44379_length_447_cov_181.225728_g36647_i0forward_frame_2 - 6.4e-15 55.1 0.0 1e-14 54.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 NODE_44379_length_447_cov_181.225728_g36647_i0forward_frame_2 - 2.9e-09 37.5 0.0 4.1e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 NODE_44379_length_447_cov_181.225728_g36647_i0forward_frame_2 - 4e-08 33.5 0.2 5.6e-08 33.1 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 BNIP3 PF06553.12 NODE_44372_length_447_cov_527.495146_g36640_i0reverse_frame_2 - 0.032 13.9 2.2 0.043 13.5 2.2 1.1 1 0 0 1 1 1 0 BNIP3 Mycobact_memb PF05423.13 NODE_44365_length_447_cov_4601.033981_g36634_i0reverse_frame_3 - 0.16 11.9 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Mycobacterium membrane protein IRK PF01007.20 NODE_44365_length_447_cov_4601.033981_g36634_i0forward_frame_3 - 2 8.3 6.6 0.38 10.5 0.5 2.0 2 0 0 2 2 2 0 Inward rectifier potassium channel transmembrane domain FixQ PF05545.11 NODE_44365_length_447_cov_4601.033981_g36634_i0forward_frame_3 - 3 7.9 10.0 0.2 11.6 2.7 2.1 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ DUF3678 PF12435.8 NODE_44365_length_447_cov_4601.033981_g36634_i0forward_frame_2 - 0.39 10.1 6.9 0.22 10.9 1.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3678) LRR_6 PF13516.6 ORF98945 - 0.2 11.8 9.5 0.35 11.0 0.3 3.8 3 0 0 3 3 3 0 Leucine Rich repeat TMEM154 PF15102.6 ORF9648 - 0.89 9.5 6.2 1.4 8.9 6.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Lustrin_cystein PF14625.6 ORF94079 - 0.68 10.4 5.0 0.28 11.6 1.6 2.1 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain Ribonuc_L-PSP PF01042.21 ORF93318 - 3.8e-28 97.9 0.4 4.5e-28 97.7 0.4 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP AAA_29 PF13555.6 ORF93318 - 0.11 12.2 0.1 0.19 11.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain MORN PF02493.20 ORF92982 - 0.00012 21.7 3.1 0.001 18.8 0.8 2.6 2 0 0 2 2 2 1 MORN repeat TTL PF03133.15 ORF91772 - 1.3e-16 60.6 0.1 1.8e-16 60.1 0.1 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF91772 - 1.2e-06 28.0 0.0 1.5e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF91772 - 4e-05 23.0 0.0 6.3e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF91772 - 0.0048 16.5 0.0 0.0069 15.9 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus CCDC158 PF15921.5 ORF9163 - 0.63 7.8 1.0 0.57 7.9 1.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 158 SCP2 PF02036.17 ORF90055 - 1e-18 67.7 0.1 1.3e-18 67.3 0.1 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF90055 - 0.0097 16.2 0.0 0.014 15.7 0.0 1.2 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal Cmc1 PF08583.10 ORF89124 - 0.048 13.7 0.0 0.088 12.8 0.0 1.5 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like CHCH PF06747.13 ORF89124 - 1.5 9.1 0.0 1.5 9.1 0.0 3.1 5 0 0 5 5 5 0 CHCH domain PTS_EIIA_2 PF00359.22 ORF88565 - 3.1e-31 108.2 0.0 3.4e-31 108.1 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DUF3450 PF11932.8 ORF8838 - 0.002 17.5 1.0 0.0031 16.9 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) GPS2_interact PF15784.5 ORF8838 - 0.025 15.0 0.1 0.056 13.9 0.1 1.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain T3SS_needle_F PF09392.10 ORF8838 - 0.13 12.5 0.4 0.19 12.0 0.4 1.3 1 0 0 1 1 1 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF DUF3446 PF11928.8 ORF8838 - 2.8 8.3 6.3 0.57 10.5 0.6 2.1 1 1 1 2 2 2 0 Early growth response N-terminal domain DUF4734 PF15881.5 ORF87881 - 0.37 11.0 5.0 0.72 10.1 5.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4734) zf-RING_2 PF13639.6 ORF87839 - 6e-09 36.1 15.4 9.8e-09 35.4 15.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF87839 - 6e-06 26.0 11.8 9.8e-06 25.3 11.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF87839 - 0.00024 20.8 15.2 0.00024 20.8 15.2 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF87839 - 0.0018 18.0 15.0 0.0032 17.3 15.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF87839 - 0.0031 17.5 10.6 0.12 12.4 7.0 2.3 2 0 0 2 2 2 2 RING-type zinc-finger zf-rbx1 PF12678.7 ORF87839 - 0.005 17.1 14.5 0.011 16.0 14.5 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain Baculo_RING PF05883.11 ORF87839 - 0.022 14.7 2.9 0.033 14.2 2.9 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-ANAPC11 PF12861.7 ORF87839 - 0.05 13.7 9.4 0.16 12.1 9.4 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger CTU2 PF10288.9 ORF87839 - 0.1 12.8 3.8 5.8 7.2 3.8 2.1 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Prok-RING_4 PF14447.6 ORF87839 - 0.2 11.5 10.1 0.37 10.7 10.1 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF87839 - 0.26 11.0 11.1 0.47 10.1 11.1 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF87839 - 0.57 10.3 13.6 1.5 9.0 13.6 1.7 1 0 0 1 1 1 0 RING-variant domain zf-RING_5 PF14634.6 ORF87839 - 0.97 9.5 13.5 2.2 8.3 13.5 1.6 1 1 1 2 2 2 0 zinc-RING finger domain ATG16 PF08614.11 ORF8579 - 1.4e-06 28.7 13.9 1.9e-06 28.3 13.9 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF4201 PF13870.6 ORF8579 - 0.00031 20.5 7.0 0.00046 20.0 7.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) DUF641 PF04859.12 ORF8579 - 0.0049 17.2 9.9 0.02 15.2 2.3 2.2 1 1 1 2 2 2 1 Plant protein of unknown function (DUF641) Csm1_N PF18504.1 ORF8579 - 0.0051 17.1 8.7 0.14 12.5 1.5 2.5 1 1 1 2 2 2 2 Csm1 N-terminal domain KASH_CCD PF14662.6 ORF8579 - 0.0052 16.6 8.0 0.0062 16.4 8.0 1.1 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH Fib_alpha PF08702.10 ORF8579 - 0.0074 16.5 4.6 0.04 14.1 4.2 1.9 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family FapA PF03961.13 ORF8579 - 0.012 14.2 2.6 0.012 14.2 2.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4005 PF13178.6 ORF8579 - 0.013 16.2 1.9 0.013 16.2 1.9 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4005) SpecificRecomb PF10136.9 ORF8579 - 0.021 13.2 2.3 0.025 12.9 2.3 1.0 1 0 0 1 1 1 0 Site-specific recombinase Spc7 PF08317.11 ORF8579 - 0.022 13.6 7.8 0.03 13.2 7.8 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DASH_Spc34 PF08657.10 ORF8579 - 0.025 14.4 5.0 0.032 14.1 5.0 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 DUF812 PF05667.11 ORF8579 - 0.029 13.3 7.3 0.036 13.0 7.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) FAM76 PF16046.5 ORF8579 - 0.036 13.4 7.5 0.048 13.0 7.5 1.3 1 1 0 1 1 1 0 FAM76 protein PKcGMP_CC PF16808.5 ORF8579 - 0.037 13.9 8.9 0.13 12.1 2.4 2.5 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF745 PF05335.13 ORF8579 - 0.093 12.4 6.1 0.15 11.8 6.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF745) Sec2p PF06428.11 ORF8579 - 0.098 12.6 9.3 0.26 11.3 1.4 2.3 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p DUF724 PF05266.14 ORF8579 - 0.1 12.4 3.9 0.14 12.0 3.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF4200 PF13863.6 ORF8579 - 0.1 13.0 12.0 0.58 10.6 11.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Macoilin PF09726.9 ORF8579 - 0.11 11.0 5.8 0.13 10.8 5.8 1.0 1 0 0 1 1 1 0 Macoilin family Seryl_tRNA_N PF02403.22 ORF8579 - 0.18 12.1 6.6 0.39 11.0 6.6 1.6 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain OmpH PF03938.14 ORF8579 - 0.18 12.1 8.1 0.03 14.7 4.5 1.4 2 0 0 2 2 1 0 Outer membrane protein (OmpH-like) TMF_DNA_bd PF12329.8 ORF8579 - 0.21 11.6 10.3 2.2 8.4 1.6 2.5 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding HAUS-augmin3 PF14932.6 ORF8579 - 0.23 11.0 8.9 0.31 10.6 8.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Draxin PF15550.6 ORF8579 - 0.29 11.0 6.5 0.34 10.8 6.5 1.1 1 0 0 1 1 1 0 Draxin Atg14 PF10186.9 ORF8579 - 0.34 9.9 10.7 0.4 9.7 10.7 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF932 PF06067.11 ORF8579 - 0.37 10.5 4.6 0.1 12.3 1.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF932) UPF0242 PF06785.11 ORF8579 - 0.46 10.6 10.6 2.9 8.0 10.6 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF8579 - 0.58 9.5 5.4 0.7 9.2 5.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 ORF8579 - 1.2 8.3 3.3 1.5 8.0 3.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein YabA PF06156.13 ORF8579 - 2 9.1 7.2 1.2 9.8 4.6 2.0 2 1 0 2 2 1 0 Initiation control protein YabA HIP1_clath_bdg PF16515.5 ORF8579 - 2.9 8.5 14.8 5.6 7.7 7.6 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Spc24 PF08286.11 ORF8579 - 4.3 7.6 7.8 18 5.6 6.0 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Cep57_MT_bd PF06657.13 ORF8579 - 6.4 7.3 11.4 0.61 10.6 6.6 1.9 2 2 0 2 2 1 0 Centrosome microtubule-binding domain of Cep57 CENP-H PF05837.12 ORF8579 - 8.6 6.8 12.3 1.2 9.6 8.7 1.4 2 0 0 2 2 1 0 Centromere protein H (CENP-H) TA_inhibitor PF17574.2 ORF8451 - 0.022 14.8 1.4 0.043 13.8 1.4 1.6 1 1 0 1 1 1 0 Inhibitor of toxin/antitoxin system (Gp4.5) DUF1236 PF06823.12 ORF82741 - 0.085 12.7 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1236) Borrelia_orfA PF02414.15 ORF82568 - 0.61 9.7 15.3 1.4 8.5 15.3 1.5 1 1 0 1 1 1 0 Borrelia ORF-A MORN PF02493.20 ORF82078 - 0.0029 17.4 13.3 0.0079 16.0 0.1 4.6 6 0 0 6 6 6 2 MORN repeat PTSIIA_gutA PF03829.13 ORF82078 - 0.052 13.4 0.0 0.077 12.9 0.0 1.3 1 0 0 1 1 1 0 PTS system glucitol/sorbitol-specific IIA component DUF2162 PF09930.9 ORF79757 - 0.058 12.8 0.0 0.065 12.6 0.0 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) OTOS PF15182.6 ORF7959 - 0.22 11.5 0.0 0.34 10.9 0.0 1.2 1 0 0 1 1 1 0 Otospiralin Peptidase_M24 PF00557.24 ORF74971 - 2.3e-05 24.2 0.0 3.1e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 SCP2 PF02036.17 ORF74174 - 7.6e-19 68.1 0.1 9.5e-19 67.8 0.1 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF74174 - 0.0022 18.2 0.0 0.0024 18.1 0.0 1.2 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal zf-C3HC4_4 PF15227.6 ORF7315 - 0.1 12.8 0.8 0.17 12.1 0.8 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING RnlB_antitoxin PF15933.5 ORF71206 - 0.018 15.3 0.2 0.026 14.8 0.2 1.4 1 0 0 1 1 1 0 Antitoxin to bacterial toxin RNase LS or RnlA MORN PF02493.20 ORF66946 - 4.3e-16 57.7 36.0 3.4e-05 23.5 1.6 4.5 5 0 0 5 5 5 4 MORN repeat NPDC1 PF06809.11 ORF66868 - 0.036 13.1 0.2 0.044 12.8 0.2 1.1 1 0 0 1 1 1 0 Neural proliferation differentiation control-1 protein (NPDC1) RapH_N PF18801.1 ORF66868 - 0.082 13.0 3.2 0.23 11.6 3.2 1.7 1 0 0 1 1 1 0 response regulator aspartate phosphatase H, N terminal CAS_CSE1 PF03378.15 ORF66868 - 0.13 10.7 2.6 0.15 10.5 2.6 1.0 1 0 0 1 1 1 0 CAS/CSE protein, C-terminus DUF2344 PF10105.9 ORF66868 - 0.92 9.3 4.5 0.23 11.3 0.3 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2344) Fib_alpha PF08702.10 ORF66868 - 1.1 9.5 12.8 7.8 6.7 1.2 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family YtxH PF12732.7 ORF66868 - 4.5 7.9 8.6 21 5.7 0.3 2.3 2 0 0 2 2 2 0 YtxH-like protein PAP2 PF01569.21 ORF66627 - 8.5e-19 67.7 3.2 1e-18 67.4 3.2 1.1 1 0 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 ORF66627 - 0.0033 17.1 1.4 0.0074 16.0 1.4 1.5 1 1 0 1 1 1 1 PAP2 superfamily DUF441 PF04284.13 ORF62074 - 2.7e-45 153.8 20.1 3.2e-45 153.6 20.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF441) CCB1 PF12046.8 ORF62074 - 0.64 9.3 2.8 0.66 9.3 1.5 1.7 1 1 0 1 1 1 0 Cofactor assembly of complex C subunit B CPP1-like PF11833.8 ORF62074 - 3.7 7.2 8.2 0.76 9.4 4.4 1.7 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like VOMI PF03762.17 ORF62004 - 0.12 12.5 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 Vitelline membrane outer layer protein I (VOMI) PIH1_CS PF18201.1 ORF61432 - 1.2e-15 57.7 0.0 1.6e-15 57.3 0.0 1.1 1 0 0 1 1 1 1 PIH1 CS-like domain Glyco_transf_8C PF08437.10 ORF60223 - 0.021 14.9 0.5 0.038 14.1 0.5 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 8 C-terminal Borrelia_orfA PF02414.15 ORF60208 - 0.61 9.7 15.3 1.4 8.5 15.3 1.5 1 1 0 1 1 1 0 Borrelia ORF-A DUF676 PF05057.14 ORF59959 - 0.0032 17.0 0.4 0.0052 16.3 0.4 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) AAA_7 PF12775.7 ORF59959 - 0.008 15.7 2.0 0.011 15.3 2.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF4658 PF15555.6 ORF59775 - 0.043 13.9 0.2 0.066 13.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) MISS PF15822.5 ORF59290 - 0.00046 20.1 12.7 0.00054 19.9 12.7 1.1 1 0 0 1 1 1 1 MAPK-interacting and spindle-stabilising protein-like PAP2 PF01569.21 ORF59208 - 0.00048 19.9 2.1 0.00066 19.5 2.1 1.2 1 0 0 1 1 1 1 PAP2 superfamily PAP2_C PF14360.6 ORF59208 - 0.002 18.6 6.0 0.0034 17.9 5.7 1.6 1 1 0 1 1 1 1 PAP2 superfamily C-terminal PAP2_3 PF14378.6 ORF59208 - 0.65 9.7 5.9 0.81 9.3 5.7 1.3 1 1 0 1 1 1 0 PAP2 superfamily DUF4734 PF15881.5 ORF57146 - 0.37 11.0 5.0 0.72 10.1 5.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4734) DUF2177 PF09945.9 ORF55323 - 0.0026 17.9 11.0 0.0066 16.5 11.0 1.7 1 1 0 1 1 1 1 Predicted membrane protein (DUF2177) CW_binding_1 PF01473.20 ORF55323 - 0.12 12.8 6.2 0.12 12.8 6.2 2.3 2 0 0 2 2 2 0 Putative cell wall binding repeat Arm_3 PF16186.5 ORF53798 - 0.083 12.5 0.2 0.51 9.9 0.0 2.2 2 0 0 2 2 2 0 Atypical Arm repeat DUF2808 PF10989.8 ORF50715 - 0.063 13.3 0.2 0.11 12.5 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2808) HEPN_AbiV PF18728.1 ORF50110 - 0.023 14.8 0.0 0.03 14.5 0.0 1.3 1 0 0 1 1 1 0 AbiV Methyltransf_21 PF05050.12 ORF49417 - 0.017 15.1 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase FkbM domain EamA PF00892.20 ORF49365 - 2.7e-12 47.0 20.5 3e-12 46.9 20.5 1.0 1 0 0 1 1 1 1 EamA-like transporter family DUF2070 PF09843.9 ORF49365 - 7.1 4.8 14.0 7.9 4.6 14.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) LRIF1 PF15741.5 ORF47351 - 0.041 12.4 0.6 0.044 12.3 0.6 1.0 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 T3SchapCesA PF11439.8 ORF47201 - 0.012 15.7 1.0 0.022 14.9 0.5 1.7 1 1 1 2 2 2 0 Type III secretion system filament chaperone CesA SPX PF03105.19 ORF47201 - 0.013 15.5 8.0 0.016 15.1 8.0 1.0 1 0 0 1 1 1 0 SPX domain DUF763 PF05559.11 ORF47201 - 0.057 12.6 1.7 0.07 12.3 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF763) Trp_ring PF18669.1 ORF47201 - 0.33 11.1 1.7 3 8.1 0.3 2.3 2 0 0 2 2 2 0 Trimeric autotransporter adhesin Trp ring domain DUF2115 PF09888.9 ORF47201 - 0.48 10.9 4.4 0.76 10.3 4.4 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) MtrG PF04210.13 ORF47201 - 0.48 10.3 1.6 1.4 8.8 0.3 2.3 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G TMPIT PF07851.13 ORF47201 - 1.1 8.5 4.9 1.2 8.3 4.9 1.2 1 0 0 1 1 1 0 TMPIT-like protein ALMT PF11744.8 ORF47201 - 1.6 7.4 5.4 1.9 7.3 5.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter SNF5 PF04855.12 ORF47176 - 0.16 11.8 10.2 0.13 12.0 9.1 1.3 1 1 0 1 1 1 0 SNF5 / SMARCB1 / INI1 Astro_capsid_p PF12226.8 ORF47176 - 0.27 10.3 11.6 0.32 10.1 11.6 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DNA_pol_phi PF04931.13 ORF47176 - 0.44 8.6 16.4 0.52 8.3 16.4 1.1 1 0 0 1 1 1 0 DNA polymerase phi MFMR_assoc PF16596.5 ORF47176 - 0.72 10.3 10.8 1.1 9.8 10.8 1.4 1 0 0 1 1 1 0 Disordered region downstream of MFMR Zip PF02535.22 ORF47176 - 1.9 7.6 8.9 2.2 7.4 8.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter ALMT PF11744.8 ORF47176 - 3.8 6.2 8.8 4.3 6.1 8.8 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Methyltransf_15 PF09445.10 ORF46305 - 2e-16 60.0 0.1 2.5e-16 59.7 0.1 1.1 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase zf-RING_2 PF13639.6 ORF41911 - 4.6e-09 36.5 15.4 9.8e-09 35.4 15.4 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF41911 - 5.5e-06 26.2 11.8 9.8e-06 25.3 11.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF41911 - 0.00024 20.8 15.2 0.00024 20.8 15.2 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF41911 - 0.0017 18.2 15.0 0.0032 17.3 15.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF41911 - 0.011 16.0 14.5 0.011 16.0 14.5 1.9 2 1 0 2 2 2 0 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF41911 - 0.018 15.0 13.6 0.12 12.4 7.0 2.4 2 0 0 2 2 2 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF41911 - 0.048 13.7 9.4 0.16 12.1 9.4 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Baculo_RING PF05883.11 ORF41911 - 0.1 12.6 5.3 0.14 12.1 4.9 1.5 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain Zn_ribbon_17 PF17120.5 ORF41911 - 0.21 11.2 11.0 0.41 10.3 11.0 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF41911 - 0.83 9.7 13.5 2.2 8.3 13.5 1.7 1 1 1 2 2 2 0 zinc-RING finger domain RINGv PF12906.7 ORF41911 - 3.5 7.8 17.1 1.4 9.1 13.6 2.1 2 0 0 2 2 2 0 RING-variant domain APOBEC_N PF08210.11 ORF40140 - 2.9 7.8 7.6 4.4 7.2 5.4 1.9 2 0 0 2 2 2 0 APOBEC-like N-terminal domain zf-RING_10 PF16685.5 ORF40066 - 0.063 13.4 0.9 0.11 12.7 0.9 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 EVC2_like PF12297.8 ORF39977 - 0.23 10.1 0.1 0.27 9.9 0.1 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Glucos_trans_II PF14264.6 ORF39977 - 0.43 9.9 9.8 1.4 8.2 9.8 1.7 1 1 0 1 1 1 0 Glucosyl transferase GtrII Ten1_2 PF15490.6 ORF38246 - 1.9e-10 40.5 0.0 2.6e-10 40.1 0.0 1.3 1 1 0 1 1 1 1 Telomere-capping, CST complex subunit Rep_fac-A_3 PF08661.11 ORF38246 - 1.9e-05 25.0 0.0 2.6e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Replication factor A protein 3 RecQ_Zn_bind PF16124.5 ORF38125 - 0.054 14.2 0.1 0.14 12.9 0.1 1.8 1 1 0 1 1 1 0 RecQ zinc-binding MORN PF02493.20 ORF37842 - 9.9e-07 28.3 1.8 9.9e-07 28.3 1.8 4.4 4 0 0 4 4 4 2 MORN repeat PT-HINT PF07591.11 ORF37842 - 0.043 14.1 0.0 0.086 13.1 0.0 1.4 1 1 0 1 1 1 0 Pretoxin HINT domain HECT PF00632.25 ORF36778 - 4.9e-39 134.6 0.1 5.4e-39 134.5 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Haem_bd PF14376.6 ORF36778 - 0.063 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Haem-binding domain IL28A PF15177.6 ORF35938 - 0.069 13.0 4.8 0.12 12.2 4.8 1.3 1 0 0 1 1 1 0 Interleukin-28A Pyr_redox_2 PF07992.14 ORF35792 - 1.2e-12 47.7 0.1 1.8e-12 47.1 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF35792 - 0.033 14.7 0.2 0.059 13.9 0.2 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Inhibitor_I78 PF11720.8 ORF35792 - 0.12 12.5 0.0 2.3 8.3 0.0 2.3 2 0 0 2 2 2 0 Peptidase inhibitor I78 family Mito_morph_reg PF14972.6 ORF35088 - 0.35 10.5 4.2 0.45 10.1 4.2 1.3 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator PFK PF00365.20 ORF34799 - 0.05 12.9 0.7 0.057 12.7 0.7 1.0 1 0 0 1 1 1 0 Phosphofructokinase SCP2 PF02036.17 ORF34553 - 1e-18 67.7 0.1 1.3e-18 67.3 0.1 1.1 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 ORF34553 - 0.0097 16.2 0.0 0.014 15.7 0.0 1.2 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal FecR PF04773.13 ORF33704 - 0.061 13.9 0.0 0.091 13.4 0.0 1.6 1 1 0 1 1 1 0 FecR protein RIBIOP_C PF04950.12 ORF33704 - 0.53 9.7 3.5 0.57 9.6 3.5 1.0 1 0 0 1 1 1 0 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal MIT_C PF16565.5 ORF33704 - 0.87 9.6 2.9 0.66 9.9 1.2 1.6 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT DUF3367 PF11847.8 ORF33704 - 1.8 6.3 7.4 2 6.2 7.4 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase Nop16 PF09420.10 ORF33704 - 4.6 7.2 9.8 5.7 6.9 9.8 1.1 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 MORN PF02493.20 ORF33543 - 3.7e-05 23.4 10.2 0.0018 18.1 0.1 4.3 4 0 0 4 4 4 2 MORN repeat Dickkopf_N PF04706.12 ORF33285 - 0.36 11.3 4.2 1 9.9 4.2 1.8 1 1 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region DUF2892 PF11127.8 ORF33214 - 0.18 11.8 5.3 0.067 13.2 1.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) UQ_con PF00179.26 ORF3317 - 1.1e-37 128.8 0.1 1.2e-37 128.7 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF3317 - 9.8e-05 22.1 0.0 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 ORF3317 - 0.005 17.1 0.0 0.0072 16.6 0.0 1.3 1 0 0 1 1 1 1 RWD domain Tuberculin PF12198.8 ORF30765 - 0.079 13.1 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 Theoretical tuberculin protein TRAPPC10 PF12584.8 ORF28967 - 0.15 11.8 0.0 0.24 11.1 0.0 1.4 1 1 0 1 1 1 0 Trafficking protein particle complex subunit 10, TRAPPC10 DUF4027 PF13219.6 ORF28967 - 0.34 10.8 1.0 0.69 9.8 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4027) HJURP_C PF12347.8 ORF28910 - 0.044 13.8 0.9 0.044 13.8 0.9 1.7 2 1 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat MitoNEET_N PF10660.9 ORF28036 - 0.009 16.0 0.0 0.024 14.7 0.0 1.7 2 0 0 2 2 2 1 Iron-containing outer mitochondrial membrane protein N-terminus FeoB_associated PF12669.7 ORF28036 - 0.039 14.4 0.0 0.064 13.7 0.0 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein TrbC PF04956.13 ORF28036 - 0.13 12.5 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 TrbC/VIRB2 family zf-C2H2 PF00096.26 ORF25545 - 5e-15 55.0 42.1 7e-06 26.2 4.1 6.2 6 0 0 6 6 6 4 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF25545 - 2.9e-12 46.3 40.8 0.00044 20.9 2.8 6.1 6 0 0 6 6 6 4 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF25545 - 2.5e-11 43.4 33.4 2.6e-05 24.4 3.2 5.4 5 0 0 5 5 5 5 Zinc-finger double domain LIM PF00412.22 ORF25545 - 0.00015 21.9 17.2 0.32 11.3 5.8 4.3 3 1 0 3 3 3 2 LIM domain zf-C2H2_3rep PF18868.1 ORF25545 - 0.00044 20.9 16.9 0.0023 18.6 9.1 2.6 1 1 1 2 2 2 2 Zinc finger C2H2-type, 3 repeats zf-met PF12874.7 ORF25545 - 0.037 14.4 1.1 0.037 14.4 1.1 5.0 6 0 0 6 6 6 0 Zinc-finger of C2H2 type zf-LYAR PF08790.11 ORF25545 - 0.052 13.5 1.1 0.052 13.5 1.1 4.0 4 0 0 4 4 4 0 LYAR-type C2HC zinc finger PBAN PF05874.11 ORF25545 - 0.078 12.9 0.1 0.092 12.6 0.1 1.2 1 0 0 1 1 1 0 Pheromone biosynthesis activating neuropeptide (PBAN) zf_C2H2_ZHX PF18387.1 ORF25545 - 0.12 12.1 0.5 0.12 12.1 0.5 3.9 4 1 1 5 5 5 0 Zinc-fingers and homeoboxes C2H2 finger domain Evr1_Alr PF04777.13 ORF25545 - 0.12 12.8 22.8 2.7 8.5 0.6 4.0 1 1 2 4 4 4 0 Erv1 / Alr family zf-C2H2_6 PF13912.6 ORF25545 - 0.14 12.1 39.9 0.38 10.8 1.0 6.1 6 1 0 6 6 6 0 C2H2-type zinc finger zf_UBZ PF18439.1 ORF25545 - 0.21 11.2 15.1 1.6 8.4 0.2 4.5 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-C2HC_2 PF13913.6 ORF25545 - 0.35 10.8 0.3 0.35 10.8 0.3 5.2 6 0 0 6 6 6 0 zinc-finger of a C2HC-type Zn-ribbon_8 PF09723.10 ORF25545 - 0.35 11.0 16.8 2.3 8.4 0.6 4.3 4 0 0 4 4 4 0 Zinc ribbon domain HNH_5 PF14279.6 ORF25545 - 0.51 10.2 15.9 1.7 8.6 6.4 3.8 3 1 0 3 3 3 0 HNH endonuclease zf-Di19 PF05605.12 ORF25545 - 4.4 7.7 28.2 0.25 11.7 3.2 4.0 1 1 3 4 4 4 0 Drought induced 19 protein (Di19), zinc-binding PyrI_C PF02748.15 ORF25545 - 6.8 6.7 25.4 0.41 10.6 0.9 4.4 4 1 0 4 4 4 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Mut7-C PF01927.16 ORF25545 - 7.3 6.7 17.4 9.5 6.3 0.7 3.4 1 1 1 3 3 3 0 Mut7-C RNAse domain DAP10 PF07213.11 ORF24929 - 0.058 13.4 0.5 0.6 10.1 0.1 2.1 2 0 0 2 2 2 0 DAP10 membrane protein S_4TM PF18159.1 ORF24033 - 3.7 6.8 4.7 5.2 6.3 4.7 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF1706 PF08020.11 ORF22011 - 0.13 12.1 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1706) His_Me_b4a2 PF18275.1 ORF20096 - 0.22 11.6 1.7 0.23 11.5 0.3 1.8 2 0 0 2 2 2 0 His-Me finger endonuclease beta4-alpha2 domain Ribosomal_L34e PF01199.18 ORF19708 - 4.1e-31 107.1 0.2 4.1e-31 107.1 0.2 1.8 2 0 0 2 2 2 1 Ribosomal protein L34e PAG PF15347.6 ORF19708 - 0.003 16.6 0.1 0.0033 16.5 0.1 1.0 1 0 0 1 1 1 1 Phosphoprotein associated with glycosphingolipid-enriched BatD PF13584.6 ORF19708 - 0.0074 15.2 0.4 0.012 14.4 0.4 1.3 1 1 0 1 1 1 1 Oxygen tolerance Vfa1 PF08432.10 ORF19708 - 0.037 14.4 6.7 0.053 13.8 6.7 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 UQ_con PF00179.26 ORF19576 - 1e-21 77.1 1.1 1.1e-21 76.9 1.1 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF19576 - 0.023 15.0 2.5 0.035 14.4 2.5 1.4 1 1 0 1 1 1 0 RWD domain UEV PF05743.13 ORF19576 - 0.1 12.5 1.7 0.22 11.4 1.7 1.7 1 1 0 1 1 1 0 UEV domain DUF3781 PF12636.7 ORF19576 - 0.24 11.3 1.5 0.32 10.9 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3781) TRI5 PF06330.11 ORF18743 - 5.3e-05 22.3 0.0 6e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Trichodiene synthase (TRI5) 3-dmu-9_3-mt PF06983.13 ORF17971 - 0.1 13.1 1.0 2.9 8.5 0.1 2.6 2 1 1 3 3 3 0 3-demethylubiquinone-9 3-methyltransferase DUF4797 PF16051.5 ORF152349 - 0.024 14.6 0.0 0.04 13.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4797) DUF4347 PF14252.6 ORF152349 - 0.068 13.0 0.1 0.087 12.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4347) FecR PF04773.13 ORF152253 - 0.061 13.9 0.0 0.091 13.4 0.0 1.6 1 1 0 1 1 1 0 FecR protein RIBIOP_C PF04950.12 ORF152253 - 0.53 9.7 3.5 0.57 9.6 3.5 1.0 1 0 0 1 1 1 0 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal MIT_C PF16565.5 ORF152253 - 0.87 9.6 2.9 0.66 9.9 1.2 1.6 1 1 1 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT DUF3367 PF11847.8 ORF152253 - 1.8 6.3 7.4 2 6.2 7.4 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase Nop16 PF09420.10 ORF152253 - 4.6 7.2 9.8 5.7 6.9 9.8 1.1 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 ATG_C PF09333.11 ORF151458 - 7.6e-06 26.2 0.0 1.6e-05 25.2 0.0 1.5 1 1 0 1 1 1 1 Autophagy-related protein C terminal domain VPS13_C PF16909.5 ORF151458 - 0.00047 20.0 1.4 0.0012 18.7 1.1 1.8 1 1 1 2 2 2 2 Vacuolar-sorting-associated 13 protein C-terminal Arm-DNA-bind_5 PF17293.2 ORF151435 - 0.0014 19.0 2.3 0.0023 18.4 2.2 1.5 1 1 0 1 1 1 1 Arm DNA-binding domain TraL PF07178.11 ORF151435 - 0.079 13.4 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 TraL protein KIND PF16474.5 ORF150154 - 0.16 11.9 2.3 4.1 7.3 0.8 2.0 1 1 1 2 2 2 0 Kinase non-catalytic C-lobe domain Pyr_redox_dim PF02852.22 ORF149123 - 0.15 12.3 0.5 4.2 7.7 0.4 2.3 2 1 1 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DUF1700 PF08006.11 ORF148721 - 0.5 9.9 5.4 0.69 9.4 5.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) GWT1 PF06423.12 ORF147646 - 0.12 12.5 14.1 0.19 11.8 5.8 2.2 1 1 1 2 2 2 0 GWT1 Reovirus_L2 PF06016.11 ORF141301 - 0.31 8.2 1.8 0.37 7.9 1.8 1.0 1 0 0 1 1 1 0 Reovirus core-spike protein lambda-2 (L2) GST_C PF00043.25 ORF138389 - 1.8e-07 31.2 0.0 2.5e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF138389 - 0.0017 18.5 0.1 0.0022 18.1 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF138389 - 0.0076 16.3 0.0 0.015 15.3 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Microcephalin PF12258.8 ORF13780 - 0.046 13.0 0.0 0.065 12.5 0.0 1.1 1 0 0 1 1 1 0 Microcephalin protein DUF1707 PF08044.11 ORF13780 - 0.088 12.9 0.1 0.17 12.0 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1707) KIAA1430 PF13879.6 ORF137351 - 0.023 15.4 11.2 0.31 11.8 10.7 2.3 1 1 0 1 1 1 0 KIAA1430 homologue ROKNT PF08067.11 ORF137351 - 0.088 13.1 0.6 0.3 11.4 0.6 1.9 1 0 0 1 1 1 0 ROKNT (NUC014) domain Joubert PF15392.6 ORF137066 - 0.0031 17.3 0.1 0.0036 17.1 0.1 1.0 1 0 0 1 1 1 1 Joubert syndrome-associated Flagellar_put PF12611.8 ORF13678 - 8.7 6.2 7.4 23 4.9 0.3 3.6 4 0 0 4 4 4 0 Putative flagellar Lentivirus_VIF PF05851.11 ORF134507 - 0.012 14.6 0.1 0.016 14.1 0.1 1.2 1 0 0 1 1 1 0 Lentivirus virion infectivity factor (VIF) DUF2070 PF09843.9 ORF134259 - 0.62 8.3 8.2 0.69 8.1 8.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2207 PF09972.9 ORF134259 - 0.87 8.3 3.7 1 8.0 3.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) GWT1 PF06423.12 ORF133586 - 0.11 12.6 14.0 0.14 12.3 5.7 2.2 1 1 1 2 2 2 0 GWT1 Zn_Tnp_IS91 PF14319.6 ORF131951 - 0.12 12.4 6.6 0.62 10.1 5.9 2.1 1 1 1 2 2 2 0 Transposase zinc-binding domain Imm75 PF15660.6 ORF13191 - 0.17 12.1 0.2 0.27 11.5 0.2 1.3 1 0 0 1 1 1 0 Putative Immunity protein 75 HJURP_C PF12347.8 ORF129980 - 0.044 13.8 0.9 0.044 13.8 0.9 1.7 2 1 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat DUF3450 PF11932.8 ORF126970 - 0.002 17.5 1.0 0.0031 16.9 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) T3SS_needle_F PF09392.10 ORF126970 - 0.0046 17.1 0.6 0.0065 16.6 0.6 1.3 1 0 0 1 1 1 1 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF GPS2_interact PF15784.5 ORF126970 - 0.024 15.1 0.1 0.054 13.9 0.1 1.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain DUF3446 PF11928.8 ORF126970 - 2.7 8.3 6.3 0.57 10.5 0.6 2.1 1 1 1 2 2 2 0 Early growth response N-terminal domain Ten1_2 PF15490.6 ORF125901 - 1.9e-10 40.5 0.0 2.6e-10 40.1 0.0 1.3 1 1 0 1 1 1 1 Telomere-capping, CST complex subunit Rep_fac-A_3 PF08661.11 ORF125901 - 1.9e-05 25.0 0.0 2.6e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Replication factor A protein 3 Exc PF07825.11 ORF125066 - 8.4e-40 134.6 1.7 8.4e-40 134.6 0.8 1.5 2 0 0 2 2 2 1 Excisionase-like protein HTH_17 PF12728.7 ORF125066 - 0.074 13.2 0.0 0.18 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Orthopox_A5L PF06193.11 ORF122472 - 7.1 6.0 8.3 8.9 5.7 8.3 1.1 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like COMM_domain PF07258.14 ORF122310 - 8.4e-09 35.4 0.0 1.4e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 COMM domain CSD PF00313.22 ORF121456 - 9.9e-18 63.8 0.2 9.9e-18 63.8 0.2 1.4 2 0 0 2 2 2 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF121456 - 0.027 14.2 0.6 0.048 13.4 0.6 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain DUF4719 PF15843.5 ORF121456 - 0.77 9.8 0.1 0.77 9.8 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4719) MCU PF04678.13 ORF120227 - 6.2e-19 68.8 4.9 8.9e-19 68.2 4.9 1.3 1 1 0 1 1 1 1 Mitochondrial calcium uniporter Troponin PF00992.20 ORF118813 - 0.031 14.6 1.2 0.045 14.0 1.2 1.2 1 0 0 1 1 1 0 Troponin Phageshock_PspG PF09583.10 ORF117429 - 8.3e-25 86.8 27.0 1.2e-24 86.4 27.0 1.2 1 0 0 1 1 1 1 Phage shock protein G (Phageshock_PspG) TraL PF07178.11 ORF117429 - 2.6 8.6 13.6 5.7 7.5 2.0 2.2 1 1 1 2 2 2 0 TraL protein Adeno_PV PF03910.13 ORF11732 - 0.27 9.9 3.5 0.26 10.0 1.8 1.6 1 1 1 2 2 2 0 Adenovirus minor core protein PV AJAP1_PANP_C PF15298.6 ORF11644 - 0.097 12.9 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 AJAP1/PANP C-terminus Glyco_transf_8C PF08437.10 ORF115799 - 0.021 14.9 0.5 0.038 14.1 0.5 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 8 C-terminal DUF4902 PF16245.5 ORF11442 - 0.085 12.8 0.6 0.17 11.8 0.3 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4902) Ion_trans PF00520.31 ORF11238 - 7.8e-07 28.6 1.1 1.3e-06 27.8 1.1 1.4 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF11238 - 2.3e-06 27.1 0.3 9.7e-06 25.1 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 ORF11238 - 9e-06 25.4 0.9 0.028 14.3 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF11238 - 3.6e-05 23.0 0.5 0.00012 21.4 0.1 2.0 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF11238 - 0.00035 21.0 1.2 0.00061 20.2 0.3 1.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF11238 - 0.013 15.0 0.1 0.027 14.0 0.1 1.6 1 0 0 1 1 1 0 EF hand UCH_1 PF13423.6 ORF11238 - 0.13 11.8 0.2 0.15 11.6 0.2 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase CFC PF09443.10 ORF112233 - 1.5 8.8 12.3 1.2 9.1 1.6 2.6 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) MFS_1 PF07690.16 ORF11087 - 1.2e-05 24.5 19.7 1.7e-05 23.9 19.7 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_4 PF06779.14 ORF11087 - 0.0062 15.9 13.1 0.0074 15.6 13.1 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB DUF2417 PF10329.9 ORF11087 - 0.02 14.3 0.0 0.03 13.8 0.0 1.2 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF442 PF04273.13 ORF11087 - 0.14 12.3 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Putative phosphatase (DUF442) Fe_hyd_lg_C PF02906.14 ORF110523 - 0.027 14.2 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain DUF2457 PF10446.9 ORF10879 - 8 5.5 13.5 9.8 5.2 13.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF3450 PF11932.8 ORF106545 - 0.002 17.5 1.0 0.0031 16.9 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) GPS2_interact PF15784.5 ORF106545 - 0.025 15.0 0.1 0.056 13.9 0.1 1.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain T3SS_needle_F PF09392.10 ORF106545 - 0.13 12.5 0.4 0.19 12.0 0.4 1.3 1 0 0 1 1 1 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF DUF3446 PF11928.8 ORF106545 - 2.8 8.3 6.3 0.57 10.5 0.6 2.1 1 1 1 2 2 2 0 Early growth response N-terminal domain RasGAP PF00616.19 ORF105134 - 0.02 14.6 4.2 0.024 14.3 4.2 1.1 1 0 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase AAA_32 PF13654.6 ORF105134 - 0.041 12.7 0.1 0.041 12.7 0.1 1.3 2 0 0 2 2 2 0 AAA domain DUF3244 PF11589.8 ORF104133 - 0.02 15.0 0.1 0.031 14.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3244) Peptidase_M50 PF02163.22 ORF103559 - 0.054 12.8 0.0 0.069 12.4 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M50 MORN PF02493.20 ORF103417 - 3.7e-05 23.4 10.2 0.0018 18.1 0.1 4.3 4 0 0 4 4 4 2 MORN repeat YqjK PF13997.6 ORF103143 - 6.2e-26 90.4 9.8 9.1e-26 89.9 9.8 1.3 1 0 0 1 1 1 1 YqjK-like protein Toxin_19 PF08088.12 ORF10212 - 0.047 13.8 2.0 0.047 13.8 2.0 1.7 2 0 0 2 2 2 0 Conotoxin I-superfamily eIF-5a PF01287.20 ORF102058 - 0.024 14.7 0.0 0.038 14.1 0.0 1.4 1 0 0 1 1 1 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold Cadherin_tail PF15974.5 ORF101404 - 0.5 10.7 5.5 1.1 9.5 5.5 1.8 1 1 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region Gag_p17 PF00540.18 ORF100854 - 0.034 14.1 0.0 0.044 13.8 0.0 1.1 1 0 0 1 1 1 0 gag gene protein p17 (matrix protein) Gag_p17 PF00540.18 ORF100020 - 0.034 14.1 0.0 0.044 13.8 0.0 1.1 1 0 0 1 1 1 0 gag gene protein p17 (matrix protein) DUF2569 PF10754.9 NODE_44930_length_439_cov_2.096535_g37176_i0forward_frame_1 - 0.024 15.1 7.8 0.03 14.8 7.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) C2 PF00168.30 NODE_44924_length_439_cov_3.329208_g37170_i0forward_frame_1 - 1.9e-07 31.3 0.1 3.2e-07 30.6 0.1 1.4 1 0 0 1 1 1 1 C2 domain FerI PF08151.12 NODE_44924_length_439_cov_3.329208_g37170_i0forward_frame_1 - 0.0082 16.2 0.0 0.031 14.4 0.0 1.9 2 0 0 2 2 2 1 FerI (NUC094) domain DUF4894 PF16235.5 NODE_44924_length_439_cov_3.329208_g37170_i0forward_frame_1 - 0.041 14.3 0.1 0.05 14.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4894) TruD PF01142.18 NODE_44924_length_439_cov_3.329208_g37170_i0forward_frame_1 - 0.047 12.5 0.0 0.057 12.2 0.0 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) LRR_4 PF12799.7 NODE_44923_length_439_cov_3.336634_g37169_i0forward_frame_1 - 4.1e-13 49.3 0.1 1.3e-05 25.4 0.1 2.5 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 NODE_44923_length_439_cov_3.336634_g37169_i0forward_frame_1 - 2e-07 30.7 0.0 0.002 17.6 0.0 2.1 1 1 1 2 2 2 2 Leucine-rich repeat LRR_8 PF13855.6 NODE_44923_length_439_cov_3.336634_g37169_i0forward_frame_1 - 4.5e-06 26.3 0.5 0.0011 18.7 0.3 2.9 1 1 1 2 2 2 2 Leucine rich repeat EzrA PF06160.12 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.008 14.4 20.9 0.012 13.8 20.9 1.3 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA V_ATPase_I PF01496.19 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.022 12.7 12.6 0.024 12.6 12.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ADIP PF11559.8 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.033 14.3 25.0 0.057 13.5 11.7 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Spc7 PF08317.11 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.073 11.9 21.3 0.095 11.6 21.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4201 PF13870.6 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.26 11.0 26.8 0.025 14.3 15.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) DUF812 PF05667.11 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.49 9.2 22.4 3.6 6.3 23.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF812) DUF406 PF04175.12 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 0.92 10.0 6.6 0.28 11.7 2.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF406) HIP1_clath_bdg PF16515.5 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 1.6 9.3 21.5 2 9.1 7.2 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF3552 PF12072.8 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 1.7 8.0 25.6 4.5 6.6 23.3 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) CREPT PF16566.5 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 2.6 8.2 17.7 3.1 7.9 8.3 2.1 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour BST2 PF16716.5 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 2.8 8.6 20.8 0.2 12.2 4.0 2.8 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 Exonuc_VII_L PF02601.15 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 3 7.3 15.1 5.1 6.6 15.1 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit OmpH PF03938.14 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 6.4 7.1 22.5 1.6 9.1 18.1 1.9 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) BLOC1_2 PF10046.9 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 7.6 6.9 19.7 4.9 7.5 10.1 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_1 - 8.5 6.4 12.5 14 5.8 1.7 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) E7 PF00527.18 NODE_44916_length_439_cov_38.900990_g37162_i0reverse_frame_1 - 0.023 14.9 0.6 0.04 14.1 0.6 1.4 1 0 0 1 1 1 0 E7 protein, Early protein Bap31_Bap29_C PF18035.1 NODE_44908_length_439_cov_82.470297_g37154_i0reverse_frame_1 - 0.77 9.8 8.7 3.1 7.9 8.7 1.9 1 1 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain Fungal_trans PF04082.18 NODE_44904_length_439_cov_85.195545_g37150_i0reverse_frame_1 - 0.044 12.8 0.0 0.055 12.5 0.0 1.1 1 0 0 1 1 1 0 Fungal specific transcription factor domain Tmemb_9 PF05434.11 NODE_44891_length_439_cov_217.856436_g37138_i0reverse_frame_1 - 0.35 10.7 5.4 0.59 10.0 5.4 1.4 1 0 0 1 1 1 0 TMEM9 PTPRCAP PF15713.5 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.01 16.1 1.4 0.014 15.7 1.4 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated RPA43_OB PF17875.1 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.059 14.0 1.0 0.084 13.5 1.0 1.1 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I RtcR PF06956.11 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.079 12.4 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase DUF913 PF06025.12 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.13 11.2 1.9 0.15 11.0 1.9 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) FancD2 PF14631.6 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.17 9.2 1.6 0.19 9.1 1.6 1.0 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease EIIBC-GUT_N PF03612.14 NODE_44869_length_440_cov_2.459259_g37116_i0reverse_frame_1 - 0.55 9.9 3.3 0.74 9.5 3.3 1.1 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus ADH_N PF08240.12 NODE_44868_length_440_cov_2.528395_g37115_i0forward_frame_1 - 0.0018 18.1 0.0 0.0065 16.3 0.0 1.7 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain Rpp20 PF12328.8 NODE_44862_length_440_cov_4.362963_g37109_i0forward_frame_1 - 0.00091 19.2 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P Alba PF01918.21 NODE_44862_length_440_cov_4.362963_g37109_i0forward_frame_1 - 0.002 17.9 0.0 0.0036 17.1 0.0 1.4 1 0 0 1 1 1 1 Alba DUF3278 PF11683.8 NODE_44862_length_440_cov_4.362963_g37109_i0forward_frame_1 - 0.068 13.2 0.5 0.1 12.7 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3278) Bim_N PF06773.11 NODE_44851_length_440_cov_67.948148_g37098_i0forward_frame_1 - 0.024 14.3 0.2 0.077 12.7 0.2 1.8 1 0 0 1 1 1 0 Bim protein N-terminus Collagen PF01391.18 NODE_44843_length_440_cov_92.753086_g37090_i0forward_frame_1 - 0.31 10.8 9.8 1.5 8.6 9.8 2.2 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) Ribosomal_L31e PF01198.19 NODE_44820_length_440_cov_683.572840_g37067_i0reverse_frame_1 - 3.9e-13 49.5 0.5 6.4e-13 48.8 0.5 1.3 1 0 0 1 1 1 1 Ribosomal protein L31e Importin_rep_6 PF18829.1 NODE_44820_length_440_cov_683.572840_g37067_i0reverse_frame_1 - 0.021 15.0 0.1 0.029 14.5 0.1 1.2 1 0 0 1 1 1 0 Importin repeat 6 Trans_reg_C PF00486.28 NODE_44812_length_441_cov_1.933498_g37060_i0forward_frame_1 - 1.4e-06 28.3 0.0 2.3e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal PAPS_reduct PF01507.19 NODE_44807_length_441_cov_2.780788_g37055_i0reverse_frame_1 - 1e-22 81.0 0.0 1.3e-22 80.6 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family YceG PF02618.16 NODE_44807_length_441_cov_2.780788_g37055_i0reverse_frame_1 - 0.055 13.0 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 YceG-like family Haemocyan_bet_s PF14830.6 NODE_44802_length_441_cov_3.344828_g37050_i0reverse_frame_1 - 0.12 12.3 1.3 0.23 11.5 0.2 1.8 1 1 1 2 2 2 0 Haemocyanin beta-sandwich AAA_21 PF13304.6 NODE_44802_length_441_cov_3.344828_g37050_i0forward_frame_1 - 0.00032 20.6 0.0 0.0022 17.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 NODE_44802_length_441_cov_3.344828_g37050_i0forward_frame_1 - 0.1 12.8 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks173.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks173.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks173.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks173.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Polo_box_2 PF18531.1 NODE_44788_length_441_cov_75.285714_g37036_i0forward_frame_1 - 0.068 13.3 0.1 0.15 12.2 0.1 1.7 1 1 0 1 1 1 0 Polo box domain CLU PF13236.6 NODE_44781_length_441_cov_91.211823_g37029_i0reverse_frame_1 - 0.013 15.4 1.7 0.016 15.1 1.4 1.3 1 1 0 1 1 1 0 Clustered mitochondria DUF2927 PF11150.8 NODE_44781_length_441_cov_91.211823_g37029_i0reverse_frame_1 - 0.057 13.5 4.2 0.069 13.2 4.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2927) GvpL_GvpF PF06386.11 NODE_44781_length_441_cov_91.211823_g37029_i0reverse_frame_1 - 0.084 12.8 5.0 0.095 12.6 5.0 1.1 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF Dpy-30 PF05186.13 NODE_44778_length_441_cov_117.908867_g37026_i0forward_frame_1 - 0.00011 21.8 0.0 0.6 9.9 0.0 2.3 2 0 0 2 2 2 2 Dpy-30 motif DUF2795 PF11387.8 NODE_44778_length_441_cov_117.908867_g37026_i0forward_frame_1 - 0.11 12.7 0.1 2.2 8.5 0.0 2.8 4 0 0 4 4 4 0 Protein of unknown function (DUF2795) Aldo_ket_red PF00248.21 NODE_44771_length_441_cov_147.253695_g37019_i0forward_frame_1 - 1.5e-06 27.7 0.0 3.5e-06 26.4 0.0 1.6 2 0 0 2 2 2 1 Aldo/keto reductase family Ribosomal_60s PF00428.19 NODE_44769_length_441_cov_149.172414_g37017_i0forward_frame_1 - 0.013 16.1 10.4 0.013 16.1 10.4 1.5 2 0 0 2 2 2 0 60s Acidic ribosomal protein Casc1 PF12366.8 NODE_44769_length_441_cov_149.172414_g37017_i0forward_frame_1 - 0.023 14.2 2.1 0.029 13.9 2.1 1.1 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 DUF5001 PF16392.5 NODE_44769_length_441_cov_149.172414_g37017_i0forward_frame_1 - 0.1 12.5 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 Ig-like domain DUF1690 PF07956.11 NODE_44757_length_441_cov_242.307882_g37006_i0forward_frame_1 - 0.0026 18.2 13.1 0.0026 18.2 13.1 1.5 1 1 1 2 2 2 1 Protein of Unknown function (DUF1690) PRP1_N PF06424.12 NODE_44757_length_441_cov_242.307882_g37006_i0forward_frame_1 - 0.92 9.9 16.6 1.3 9.4 16.6 1.3 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal Auxin_canalis PF05703.11 NODE_44757_length_441_cov_242.307882_g37006_i0forward_frame_1 - 6.9 6.5 9.6 9.3 6.1 9.6 1.2 1 0 0 1 1 1 0 Auxin canalisation Oest_recep PF02159.15 NODE_44754_length_441_cov_677.529557_g37004_i0reverse_frame_1 - 3.4 8.2 7.5 18 5.8 1.6 2.3 1 1 1 2 2 2 0 Oestrogen receptor ELFV_dehydrog PF00208.21 NODE_44742_length_442_cov_2.285012_g36993_i0reverse_frame_3 - 6.7e-52 176.6 0.5 7.4e-52 176.5 0.5 1.0 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Anticodon_1 PF08264.13 NODE_44722_length_442_cov_78.855037_g36974_i0reverse_frame_3 - 1.8 8.5 4.9 1.5 8.8 1.6 1.9 2 0 0 2 2 2 0 Anticodon-binding domain of tRNA DUF3792 PF12670.7 NODE_44722_length_442_cov_78.855037_g36974_i0forward_frame_3 - 0.43 10.8 14.1 0.53 10.5 12.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3792) DUF3328 PF11807.8 NODE_44722_length_442_cov_78.855037_g36974_i0forward_frame_3 - 1.6 8.4 3.2 1.2 8.8 0.7 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3328) FGFR3_TM PF18123.1 NODE_44721_length_442_cov_81.692875_g36973_i0reverse_frame_3 - 8.1 6.1 5.9 2.9 7.5 0.5 2.2 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain RCC1_2 PF13540.6 NODE_44721_length_442_cov_81.692875_g36973_i0reverse_frame_2 - 0.00013 21.7 1.5 0.27 11.1 0.1 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat ABC2_membrane_2 PF12679.7 NODE_44714_length_442_cov_116.923833_g36966_i0reverse_frame_2 - 0.022 14.1 1.4 0.031 13.5 1.4 1.2 1 1 0 1 1 1 0 ABC-2 family transporter protein MTBP_C PF14920.6 NODE_44710_length_442_cov_122.493857_g36962_i0forward_frame_3 - 7 6.3 21.7 8.6 6.0 21.7 1.2 1 0 0 1 1 1 0 MDM2-binding Aminotran_1_2 PF00155.21 NODE_44708_length_442_cov_126.348894_g36960_i0forward_frame_3 - 0.063 12.4 0.0 0.071 12.3 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class I and II SCF PF02404.15 NODE_44703_length_442_cov_171.565111_g36955_i0reverse_frame_2 - 1.4 8.2 6.4 2 7.7 6.4 1.1 1 0 0 1 1 1 0 Stem cell factor MORN PF02493.20 NODE_44703_length_442_cov_171.565111_g36955_i0forward_frame_3 - 2.2e-09 36.7 26.4 3.1e-05 23.6 0.9 4.8 5 1 0 5 5 5 4 MORN repeat RelB_leu_zip PF16180.5 NODE_44700_length_442_cov_233.427518_g36952_i0forward_frame_3 - 0.95 9.5 3.6 10 6.2 0.5 2.3 2 0 0 2 2 2 0 RelB leucine zipper MORN PF02493.20 NODE_44696_length_442_cov_316.024570_g36948_i0reverse_frame_3 - 2.1e-06 27.3 25.1 3.1e-05 23.6 0.9 5.0 5 1 0 5 5 5 4 MORN repeat SCF PF02404.15 NODE_44696_length_442_cov_316.024570_g36948_i0forward_frame_2 - 1.3 8.3 6.4 2 7.7 6.4 1.2 1 0 0 1 1 1 0 Stem cell factor zf-LITAF-like PF10601.9 NODE_44695_length_442_cov_377.656020_g36947_i0forward_frame_3 - 1.4e-14 54.1 22.1 2.1e-14 53.5 22.1 1.3 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain CX9C PF16860.5 NODE_44694_length_442_cov_482.390663_g36946_i0reverse_frame_3 - 0.22 11.6 0.4 0.22 11.6 0.4 2.0 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, UL42 PF17638.2 NODE_44692_length_442_cov_535.985258_g33629_i1reverse_frame_2 - 5.6 7.0 7.8 8.5 6.4 1.9 2.5 1 1 2 3 3 3 0 HCMV UL42 SOBP PF15279.6 NODE_44680_length_443_cov_2.835784_g36935_i0reverse_frame_2 - 0.048 14.3 1.7 0.055 14.1 1.7 1.1 1 0 0 1 1 1 0 Sine oculis-binding protein Secretin_N_2 PF07655.13 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_3 - 0.16 12.5 11.1 0.24 12.0 11.1 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain CDK2AP PF09806.9 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_3 - 1 9.4 4.2 1.4 9.0 4.2 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein FAM199X PF15814.5 NODE_44680_length_443_cov_2.835784_g36935_i0forward_frame_3 - 2.9 6.9 11.6 3.5 6.6 11.6 1.1 1 0 0 1 1 1 0 Protein family FAM199X LAT PF15234.6 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_3 - 0.03 14.1 2.8 0.038 13.7 2.8 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells Fe-ADH PF00465.19 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_2 - 1.5e-25 89.8 0.0 1.5e-25 89.8 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_2 - 1.1e-14 54.8 0.0 1.2e-14 54.7 0.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase ASL_C2 PF14698.6 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_2 - 0.1 13.4 0.0 0.16 12.8 0.0 1.3 1 0 0 1 1 1 0 Argininosuccinate lyase C-terminal DHQ_synthase PF01761.20 NODE_44678_length_443_cov_3.240196_g36933_i0reverse_frame_2 - 0.12 11.6 0.1 0.17 11.0 0.1 1.2 1 0 0 1 1 1 0 3-dehydroquinate synthase Mu-conotoxin PF05374.12 NODE_44677_length_443_cov_3.676471_g36932_i0forward_frame_3 - 0.22 11.6 8.2 0.46 10.5 8.2 1.6 1 0 0 1 1 1 0 Mu-Conotoxin MDFI PF15316.6 NODE_44673_length_443_cov_38.284314_g36928_i0forward_frame_2 - 5.1 7.2 7.2 1.6 8.8 4.1 1.6 1 1 1 2 2 2 0 MyoD family inhibitor TRP PF06011.12 NODE_44669_length_443_cov_61.075980_g36924_i0forward_frame_2 - 0.32 9.7 11.3 0.32 9.7 11.3 1.1 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF1995 PF09353.10 NODE_44665_length_443_cov_74.281863_g36920_i0forward_frame_2 - 3e-05 24.2 0.0 4.1e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1995) ALGX PF16822.5 NODE_44665_length_443_cov_74.281863_g36920_i0forward_frame_2 - 0.12 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 SGNH hydrolase-like domain, acetyltransferase AlgX zf-B_box PF00643.24 NODE_44662_length_443_cov_79.514706_g36917_i0forward_frame_3 - 0.00026 21.1 3.7 0.00026 21.1 3.7 2.0 2 0 0 2 2 2 1 B-box zinc finger DUF5542 PF17696.1 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_3 - 0.5 10.5 2.0 0.57 10.3 0.3 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5542) TT_ORF1 PF02956.14 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_2 - 1.4 7.5 30.4 1.9 7.0 30.4 1.2 1 0 0 1 1 1 0 TT viral orf 1 IHO1 PF15771.5 NODE_44660_length_443_cov_86.676471_g36915_i0forward_frame_2 - 3.1 6.4 5.4 3.2 6.4 5.4 1.1 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 TPH PF13868.6 NODE_44658_length_443_cov_88.906863_g36913_i0reverse_frame_3 - 0.00013 20.6 30.3 0.00016 20.3 30.3 1.1 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain DUF1682 PF07946.14 NODE_44658_length_443_cov_88.906863_g36913_i0reverse_frame_3 - 0.019 14.2 17.5 0.02 14.1 17.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Lant_dehydr_C PF14028.6 NODE_44658_length_443_cov_88.906863_g36913_i0reverse_frame_3 - 0.44 10.0 6.6 0.51 9.8 6.6 1.0 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term Atg14 PF10186.9 NODE_44658_length_443_cov_88.906863_g36913_i0reverse_frame_3 - 7.7 5.5 15.1 9.3 5.2 15.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Bromo_MP PF01573.16 NODE_44651_length_443_cov_160.605392_g36906_i0reverse_frame_2 - 0.33 10.2 2.9 0.4 10.0 2.9 1.1 1 0 0 1 1 1 0 Bromovirus movement protein DUF423 PF04241.15 NODE_44651_length_443_cov_160.605392_g36906_i0reverse_frame_2 - 0.6 10.4 4.6 0.21 11.8 1.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF423) ThiP_synth PF10120.9 NODE_44649_length_443_cov_218.625000_g36904_i0forward_frame_3 - 0.085 12.5 0.3 0.12 12.0 0.3 1.2 1 0 0 1 1 1 0 Thiamine-phosphate synthase Presenilin PF01080.17 NODE_44648_length_443_cov_241.686275_g36903_i0forward_frame_2 - 1.7 7.3 4.2 1.7 7.3 4.2 1.1 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 NODE_44648_length_443_cov_241.686275_g36903_i0forward_frame_2 - 4.3 5.5 7.3 4.2 5.5 7.3 1.1 1 0 0 1 1 1 0 CDC45-like protein PsbJ PF01788.17 NODE_44643_length_443_cov_676.110294_g36898_i0reverse_frame_3 - 1.7e-09 37.4 5.1 1.7e-09 37.4 5.1 1.9 2 0 0 2 2 2 1 PsbJ TMEM108 PF15759.5 NODE_44643_length_443_cov_676.110294_g36898_i0reverse_frame_2 - 3.8 6.4 5.0 4.3 6.2 5.0 1.0 1 0 0 1 1 1 0 TMEM108 family DUF1029 PF06269.12 NODE_44637_length_443_cov_37899.151961_g36892_i0reverse_frame_3 - 0.04 14.0 4.6 0.04 14.0 4.6 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1029) FUSC PF04632.12 NODE_44631_length_444_cov_2.212714_g36886_i0forward_frame_3 - 3e-22 78.9 4.3 3.3e-22 78.8 4.3 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family DNA_methylase PF00145.17 NODE_44624_length_444_cov_2.645477_g36879_i0forward_frame_3 - 2.2e-05 24.0 0.0 2.8e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase YejG PF13989.6 NODE_44622_length_444_cov_2.885086_g36877_i0forward_frame_3 - 9.3e-48 161.1 0.0 1.1e-47 160.8 0.0 1.1 1 0 0 1 1 1 1 YejG-like protein NRho PF16733.5 NODE_44622_length_444_cov_2.885086_g36877_i0forward_frame_3 - 0.12 12.5 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Rhomboid N-terminal domain McrBC PF10117.9 NODE_44618_length_444_cov_3.254279_g36873_i0reverse_frame_2 - 0.0095 15.1 0.1 0.011 14.9 0.1 1.1 1 0 0 1 1 1 1 McrBC 5-methylcytosine restriction system component DUF4355 PF14265.6 NODE_44618_length_444_cov_3.254279_g36873_i0reverse_frame_2 - 0.085 13.1 0.1 0.2 11.9 0.0 1.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4355) AstA PF04958.12 NODE_44615_length_444_cov_3.779951_g36870_i0forward_frame_2 - 1.4e-12 46.8 0.0 1.6e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 Arginine N-succinyltransferase beta subunit Crinivirus_P26 PF07416.11 NODE_44614_length_444_cov_3.951100_g36869_i0forward_frame_2 - 0.069 12.9 0.0 0.094 12.4 0.0 1.1 1 0 0 1 1 1 0 Crinivirus P26 protein MEDS PF14417.6 NODE_44614_length_444_cov_3.951100_g36869_i0forward_frame_2 - 0.18 11.6 0.1 0.28 11.0 0.1 1.2 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain RPS31 PF17067.5 NODE_44613_length_444_cov_4.449878_g36868_i0forward_frame_2 - 3.1 8.0 5.8 0.85 9.8 1.6 1.9 1 1 1 2 2 2 0 Ribosomal protein S31e Phenyl_P_gamma PF09662.10 NODE_44604_length_444_cov_70.044010_g36859_i0forward_frame_2 - 0.019 15.1 0.0 0.031 14.4 0.0 1.4 1 0 0 1 1 1 0 Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma) DUF2535 PF10751.9 NODE_44603_length_444_cov_71.432763_g36858_i0forward_frame_3 - 0.089 13.3 0.5 0.52 10.9 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2535) PPR_2 PF13041.6 NODE_44601_length_444_cov_74.867971_g36856_i0forward_frame_3 - 4.6e-07 29.9 0.0 0.00013 22.1 0.0 2.1 1 1 1 2 2 2 2 PPR repeat family PPR PF01535.20 NODE_44601_length_444_cov_74.867971_g36856_i0forward_frame_3 - 3.9e-05 23.6 0.0 0.0041 17.3 0.0 2.7 3 0 0 3 3 3 1 PPR repeat PPR_3 PF13812.6 NODE_44601_length_444_cov_74.867971_g36856_i0forward_frame_3 - 0.0003 20.8 0.0 0.12 12.5 0.0 2.3 1 1 2 3 3 3 3 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_44601_length_444_cov_74.867971_g36856_i0forward_frame_3 - 0.017 14.8 0.0 0.039 13.7 0.0 1.6 2 0 0 2 2 2 0 PPR repeat Peptidase_S29 PF02907.15 NODE_44600_length_444_cov_77.853301_g36855_i0reverse_frame_2 - 0.13 12.0 1.0 0.15 11.8 0.3 1.4 2 0 0 2 2 2 0 Hepatitis C virus NS3 protease FBA_2 PF07735.17 NODE_44599_length_444_cov_79.080685_g36854_i0reverse_frame_3 - 0.0014 18.7 2.4 0.0014 18.7 2.4 1.6 2 0 0 2 2 2 1 F-box associated TTRAP PF14203.6 NODE_44599_length_444_cov_79.080685_g36854_i0reverse_frame_2 - 0.016 15.2 0.1 0.13 12.3 0.0 2.3 2 0 0 2 2 2 0 Putative tranposon-transfer assisting protein Fer4_19 PF06902.11 NODE_44599_length_444_cov_79.080685_g36854_i0reverse_frame_2 - 0.19 11.8 2.2 6.7 6.9 2.2 2.3 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster DUF4946 PF16304.5 NODE_44598_length_444_cov_80.711491_g36853_i0reverse_frame_2 - 0.12 12.1 0.2 0.18 11.5 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4946) CHIPS PF11434.8 NODE_44595_length_444_cov_89.606357_g36850_i0reverse_frame_3 - 0.099 12.5 0.1 0.17 11.7 0.1 1.4 1 0 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS Sporozoite_P67 PF05642.11 NODE_44595_length_444_cov_89.606357_g36850_i0reverse_frame_2 - 0.47 8.5 0.5 0.56 8.2 0.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen APP_Cu_bd PF12924.7 NODE_44591_length_444_cov_97.782396_g36846_i0reverse_frame_3 - 0.00098 19.8 0.2 0.015 16.0 0.2 2.2 1 1 0 1 1 1 1 Copper-binding of amyloid precursor, CuBD ANAPC1 PF12859.7 NODE_44590_length_444_cov_100.740831_g36845_i0reverse_frame_2 - 0.069 13.7 3.8 0.1 13.1 3.8 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 Dot_icm_IcmQ PF09475.10 NODE_44580_length_444_cov_190.630807_g36835_i0reverse_frame_2 - 0.00074 19.1 0.2 0.00087 18.8 0.2 1.1 1 0 0 1 1 1 1 Dot/Icm secretion system protein (dot_icm_IcmQ) ZapB PF06005.12 NODE_44580_length_444_cov_190.630807_g36835_i0reverse_frame_2 - 0.011 16.2 7.0 0.011 16.2 7.0 2.2 2 0 0 2 2 2 0 Cell division protein ZapB DUF16 PF01519.16 NODE_44580_length_444_cov_190.630807_g36835_i0reverse_frame_2 - 0.37 11.3 10.4 0.8 10.2 2.5 2.2 1 1 1 2 2 2 0 Protein of unknown function DUF16 SlyX PF04102.12 NODE_44580_length_444_cov_190.630807_g36835_i0reverse_frame_2 - 4.7 7.9 16.6 19 6.0 2.1 2.3 1 1 1 2 2 2 0 SlyX DUF5082 PF16888.5 NODE_44580_length_444_cov_190.630807_g36835_i0reverse_frame_2 - 5.7 7.2 8.8 0.54 10.5 1.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) LSM PF01423.22 NODE_44579_length_444_cov_204.753056_g35319_i1reverse_frame_3 - 2.6e-08 33.4 1.1 3.8e-08 32.9 0.8 1.5 1 1 0 1 1 1 1 LSM domain DUF702 PF05142.12 NODE_44579_length_444_cov_204.753056_g35319_i1reverse_frame_2 - 0.2 12.2 9.4 0.26 11.7 9.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF702) ETRAMP PF09716.10 NODE_44572_length_444_cov_887.154034_g36828_i0reverse_frame_3 - 0.099 12.7 0.2 0.22 11.6 0.0 1.6 1 1 1 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) PepSY_2 PF13670.6 NODE_44572_length_444_cov_887.154034_g36828_i0reverse_frame_3 - 2.9 7.9 6.6 0.29 11.2 1.9 1.7 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain RbpA PF13397.6 NODE_44572_length_444_cov_887.154034_g36828_i0reverse_frame_2 - 0.0046 17.5 0.2 0.01 16.4 0.0 1.6 2 0 0 2 2 2 1 RNA polymerase-binding protein SMP PF04927.12 NODE_44572_length_444_cov_887.154034_g36828_i0reverse_frame_2 - 0.12 12.9 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 Seed maturation protein PsbK PF02533.15 NODE_44572_length_444_cov_887.154034_g36828_i0forward_frame_3 - 2.9e-20 72.1 6.4 5.6e-20 71.2 6.4 1.5 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component Plasmodium_HRP PF05403.11 NODE_44569_length_444_cov_9647.931540_g36826_i0forward_frame_2 - 0.004 17.0 2.2 0.0048 16.7 2.2 1.1 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 NODE_44569_length_444_cov_9647.931540_g36826_i0forward_frame_2 - 0.4 10.7 6.3 4 7.5 0.6 2.4 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain HTH_39 PF14090.6 NODE_44569_length_444_cov_9647.931540_g36826_i0forward_frame_2 - 0.47 10.2 2.2 4.7 7.0 0.2 2.4 1 1 1 2 2 2 0 Helix-turn-helix domain HigB-like_toxin PF05015.13 NODE_44569_length_444_cov_9647.931540_g36826_i0forward_frame_2 - 2.3 8.7 6.2 17 5.9 1.2 2.3 1 1 1 2 2 2 0 RelE-like toxin of type II toxin-antitoxin system HigB Forkhead_N PF08430.12 NODE_44569_length_444_cov_9647.931540_g36826_i0forward_frame_2 - 5.6 7.6 29.8 13 6.4 29.8 1.6 1 1 0 1 1 1 0 Forkhead N-terminal region RPA_C PF08784.11 NODE_44569_length_444_cov_9647.931540_g36826_i0forward_frame_2 - 8.3 7.1 11.7 19 6.0 4.3 2.2 1 1 1 2 2 2 0 Replication protein A C terminal TnpW PF14202.6 ORF99255 - 0.089 12.6 0.2 0.25 11.2 0.0 1.7 2 0 0 2 2 2 0 Transposon-encoded protein TnpW ETRAMP PF09716.10 ORF98535 - 0.13 12.3 0.9 0.22 11.6 0.9 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) EF-hand_1 PF00036.32 ORF98014 - 4.6e-30 100.9 13.6 3.7e-09 35.5 0.1 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF98014 - 1e-27 96.4 10.2 1.3e-13 51.2 1.6 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF98014 - 1.3e-27 93.3 11.6 6.3e-09 35.1 0.1 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF98014 - 2.7e-21 74.0 14.5 7.2e-06 25.3 0.1 4.3 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF98014 - 3.9e-14 52.2 12.8 9.2e-06 25.4 1.0 3.9 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 ORF98014 - 7.4e-08 32.6 0.0 0.0098 16.2 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain Caleosin PF05042.13 ORF98014 - 8.7e-07 29.0 0.7 0.016 15.2 0.0 3.8 1 1 2 4 4 4 2 Caleosin related protein SPARC_Ca_bdg PF10591.9 ORF98014 - 1.5e-05 25.3 1.5 0.072 13.4 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_14 PF17959.1 ORF98014 - 0.00061 20.1 1.6 0.12 12.7 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain DUF2666 PF10869.8 ORF98014 - 0.0098 16.1 4.5 1.1 9.5 0.1 2.8 1 1 2 3 3 3 2 Protein of unknown function (DUF2666) TerB PF05099.13 ORF98014 - 0.01 15.8 1.0 0.86 9.6 0.0 2.7 1 1 2 3 3 3 0 Tellurite resistance protein TerB EF-hand_11 PF08976.11 ORF98014 - 0.028 15.3 0.2 1 10.2 0.0 2.2 1 1 1 2 2 2 0 EF-hand domain EF-hand_4 PF12763.7 ORF98014 - 0.054 13.4 5.5 8.7 6.4 0.5 3.3 1 1 2 3 3 3 0 Cytoskeletal-regulatory complex EF hand Glycos_trans_3N PF02885.17 ORF98014 - 0.066 13.1 0.8 3.6 7.5 0.1 2.5 1 1 1 2 2 2 0 Glycosyl transferase family, helical bundle domain SpaA PF17802.1 ORF98014 - 0.15 12.4 1.1 7.9 6.9 1.1 2.6 1 1 0 1 1 1 0 Prealbumin-like fold domain Toprim_2 PF13155.6 ORF98014 - 0.17 12.3 0.9 6.2 7.3 0.1 2.9 1 1 2 3 3 3 0 Toprim-like EF-hand_10 PF14788.6 ORF98014 - 0.98 9.3 4.6 1.3 8.9 0.2 2.8 2 1 1 3 3 3 0 EF hand Metallophos_2 PF12850.7 ORF95586 - 0.00021 21.6 0.4 0.0012 19.1 0.4 2.0 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain zf-nanos PF05741.13 ORF93585 - 3 8.2 7.4 5.9 7.2 0.1 2.9 3 0 0 3 3 3 0 Nanos RNA binding domain Cupin_8 PF13621.6 ORF93026 - 3.1e-06 27.1 0.0 4.3e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Cupin-like domain Sa_NUDIX PF18167.1 ORF92264 - 0.025 14.4 0.1 0.037 13.8 0.1 1.2 1 0 0 1 1 1 0 SMODS-associated NUDIX domain Phos_pyr_kin PF08543.12 ORF92264 - 0.057 12.8 0.1 0.08 12.3 0.1 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Phage_holin_6_1 PF09682.10 ORF92264 - 0.058 13.8 2.4 1.4 9.4 0.5 2.1 1 1 1 2 2 2 0 Bacteriophage holin of superfamily 6 (Holin_LLH) zf-RING_9 PF13901.6 ORF92264 - 0.085 12.8 0.1 0.094 12.7 0.1 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon His_Phos_1 PF00300.22 ORF8941 - 2.4e-14 53.5 0.0 3.2e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PABP PF00658.18 ORF87760 - 4.9e-11 42.6 0.1 7.1e-11 42.1 0.1 1.2 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain DUF4106 PF13388.6 ORF87760 - 1.6 7.9 11.2 1.9 7.6 11.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) Haem_degrading PF03928.14 ORF87073 - 5.5e-29 100.6 3.0 6.1e-29 100.5 3.0 1.0 1 0 0 1 1 1 1 Haem-degrading Ribosomal_L27A PF00828.19 ORF86829 - 9.4e-24 84.5 0.1 1.3e-23 84.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DUF559 PF04480.12 ORF83616 - 0.081 12.8 0.1 0.15 12.0 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF559) UQ_con PF00179.26 ORF81510 - 9.8e-35 119.2 1.0 1.1e-34 119.1 1.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UPF1_Zn_bind PF09416.10 ORF81510 - 0.12 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) DUF438 PF04282.13 ORF81026 - 0.0068 16.3 0.0 1 9.3 0.1 2.4 2 0 0 2 2 2 2 Family of unknown function (DUF438) YppF PF14178.6 ORF81026 - 0.06 13.2 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 YppF-like protein RRF PF01765.19 ORF81026 - 0.11 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Ribosome recycling factor SIP PF04954.13 ORF81003 - 0.0014 19.1 3.9 0.0048 17.4 3.7 1.7 1 1 1 2 2 2 1 Siderophore-interacting protein FH2 PF02181.23 ORF81003 - 0.03 13.4 0.9 0.036 13.2 0.9 1.1 1 0 0 1 1 1 0 Formin Homology 2 Domain DUF812 PF05667.11 ORF81003 - 0.042 12.7 5.6 0.053 12.4 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) ADP_ribosyl_GH PF03747.14 ORF81003 - 0.43 10.3 1.7 0.61 9.8 1.7 1.1 1 0 0 1 1 1 0 ADP-ribosylglycohydrolase DUF1338 PF07063.13 ORF79586 - 0.16 11.1 0.5 0.2 10.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) Sigma_reg_N PF13800.6 ORF79347 - 0.078 13.3 1.8 4.6 7.6 0.1 2.1 2 0 0 2 2 2 0 Sigma factor regulator N-terminal SPOUT_MTase PF02590.17 ORF77292 - 0.15 12.0 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Predicted SPOUT methyltransferase Cir_Bir_Yir PF06022.11 ORF77200 - 0.0051 16.3 3.5 0.0051 16.3 3.5 1.8 1 1 1 2 2 2 1 Plasmodium variant antigen protein Cir/Yir/Bir DUF2116 PF09889.9 ORF77200 - 0.24 11.4 0.2 0.24 11.4 0.2 1.9 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF3139 PF11337.8 ORF77200 - 0.33 11.6 4.2 0.71 10.6 4.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) PspB PF06667.12 ORF77200 - 1.5 8.9 7.7 0.19 11.8 3.2 1.8 2 0 0 2 2 2 0 Phage shock protein B Trefoil PF00088.18 ORF76811 - 9.5 6.2 8.4 1.4 8.8 2.1 2.7 3 0 0 3 3 3 0 Trefoil (P-type) domain DUF3051 PF11252.8 ORF75636 - 0.25 11.0 0.0 0.33 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3051) EC042_2821 PF18740.1 ORF75170 - 0.019 14.9 0.2 0.035 14.0 0.2 1.4 1 0 0 1 1 1 0 EC042_2821-lke REase Got1 PF04178.12 ORF74708 - 1.5e-09 38.2 24.1 1.8e-09 38.0 24.1 1.1 1 0 0 1 1 1 1 Got1/Sft2-like family DUF2892 PF11127.8 ORF74708 - 1.7 8.7 16.9 23 5.1 14.8 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) HAD_SAK_1 PF10307.9 ORF74555 - 0.024 14.5 1.0 0.039 13.8 1.0 1.2 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins GIT_CC PF16559.5 ORF74374 - 0.0015 18.3 0.4 0.56 10.1 0.0 2.4 2 0 0 2 2 2 2 GIT coiled-coil Rho guanine nucleotide exchange factor AKNA PF12443.8 ORF74374 - 0.0017 18.9 0.4 0.0077 16.9 0.0 2.0 1 1 1 2 2 2 1 AT-hook-containing transcription factor Cast PF10174.9 ORF74374 - 0.0054 15.0 0.9 0.0058 14.9 0.9 1.1 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone HALZ PF02183.18 ORF74374 - 0.0077 16.4 1.5 0.84 9.9 0.1 2.6 2 1 0 2 2 2 1 Homeobox associated leucine zipper HAUS-augmin3 PF14932.6 ORF74374 - 0.013 15.1 0.2 0.017 14.7 0.2 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Harakiri PF15196.6 ORF74374 - 0.019 15.4 2.5 0.046 14.2 0.3 2.1 2 0 0 2 2 2 0 Activator of apoptosis harakiri CtIP_N PF10482.9 ORF74374 - 0.043 13.9 0.4 11 6.1 0.0 2.4 2 0 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain SlyX PF04102.12 ORF74374 - 0.093 13.4 7.1 0.97 10.1 0.9 2.8 2 1 1 3 3 3 0 SlyX DUF4140 PF13600.6 ORF74374 - 0.11 12.9 3.8 13 6.3 3.8 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) TMF_TATA_bd PF12325.8 ORF74374 - 0.14 12.4 2.4 1.9 8.7 0.3 2.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 TATA binding DivIC PF04977.15 ORF74374 - 0.16 11.7 4.6 4.8 7.0 0.5 2.6 2 1 1 3 3 3 0 Septum formation initiator ZapB PF06005.12 ORF74374 - 0.22 12.0 8.1 0.79 10.2 4.3 2.6 2 1 0 2 2 2 0 Cell division protein ZapB JIP_LZII PF16471.5 ORF74374 - 0.55 10.4 3.6 12 6.2 0.1 2.5 3 0 0 3 3 3 0 JNK-interacting protein leucine zipper II bZIP_1 PF00170.21 ORF74374 - 0.71 10.0 0.1 0.71 10.0 0.1 2.9 4 0 0 4 4 2 0 bZIP transcription factor Ribosomal_L27A PF00828.19 ORF74036 - 9.4e-24 84.5 0.1 1.3e-23 84.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Sedlin_N PF04628.13 ORF74026 - 8.5e-10 38.9 0.2 9.4e-10 38.7 0.2 1.2 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region Oxidored_q4 PF00507.19 ORF73021 - 7.1e-31 106.3 1.1 7.1e-31 106.3 1.1 1.5 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K_trans PF02705.16 ORF73021 - 0.14 10.7 2.5 0.23 10.0 2.5 1.3 1 0 0 1 1 1 0 K+ potassium transporter Phage_holin_3_6 PF07332.11 ORF73021 - 0.15 12.1 11.4 0.39 10.8 0.2 2.1 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III TRAP_alpha PF03896.16 ORF73021 - 0.22 10.7 0.0 3.8 6.6 0.0 2.0 2 0 0 2 2 2 0 Translocon-associated protein (TRAP), alpha subunit EbsA PF17255.2 ORF7243 - 0.27 11.6 5.9 0.73 10.2 0.4 2.1 2 0 0 2 2 2 0 EbsA-like protein DOMON PF03351.17 ORF72429 - 1.1e-10 41.8 0.0 1.4e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 DOMON domain DUF4695 PF15766.5 ORF72365 - 0.27 11.5 5.0 0.37 11.0 2.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4695) DUF285 PF03382.14 ORF69795 - 0.064 13.0 0.2 0.089 12.6 0.2 1.4 1 0 0 1 1 1 0 Mycoplasma protein of unknown function, DUF285 Baculo_11_kDa PF06143.11 ORF69005 - 0.6 9.7 3.5 1.3 8.7 3.5 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family TMEM192 PF14802.6 ORF69005 - 6.8 5.7 8.7 10 5.1 8.4 1.6 1 1 0 1 1 1 0 TMEM192 family FYVE PF01363.21 ORF68815 - 1.8e-10 40.8 13.0 3e-10 40.1 13.0 1.3 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF68815 - 0.00064 19.9 11.4 0.0013 18.9 11.4 1.5 1 0 0 1 1 1 1 FYVE-type zinc finger zf-C2H2_6 PF13912.6 ORF68815 - 0.06 13.4 1.6 0.06 13.4 1.6 4.5 5 0 0 5 5 5 0 C2H2-type zinc finger Thioredoxin_8 PF13905.6 ORF67553 - 2.5e-22 79.0 0.1 3.5e-22 78.5 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.21 ORF67553 - 1.8e-05 24.6 0.4 0.0002 21.3 0.5 1.9 1 1 1 2 2 2 1 AhpC/TSA family Redoxin PF08534.10 ORF67553 - 0.00031 20.5 0.0 0.00034 20.3 0.0 1.2 1 0 0 1 1 1 1 Redoxin zf-AD PF07776.15 ORF67553 - 0.0073 16.5 0.7 0.018 15.3 0.4 1.8 2 0 0 2 2 2 1 Zinc-finger associated domain (zf-AD) Thioredoxin PF00085.20 ORF67553 - 0.013 15.4 1.3 0.023 14.7 1.3 1.5 1 1 0 1 1 1 0 Thioredoxin Thioredoxin_2 PF13098.6 ORF67553 - 0.027 14.9 0.2 0.035 14.6 0.2 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain ACP53EA PF06313.11 ORF67553 - 0.05 13.8 0.1 0.077 13.2 0.1 1.4 1 0 0 1 1 1 0 Drosophila ACP53EA protein Glutaredoxin PF00462.24 ORF67553 - 0.15 12.3 1.1 0.7 10.2 1.1 2.0 1 1 0 1 1 1 0 Glutaredoxin SAM_2 PF07647.17 ORF66821 - 1.3e-10 41.2 0.0 2e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_1 PF00536.30 ORF66821 - 1.4e-09 38.3 0.1 2e-09 37.7 0.1 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) API5 PF05918.11 ORF66821 - 0.02 13.7 0.4 0.023 13.5 0.4 1.0 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) SAM_Ste50p PF09235.10 ORF66821 - 0.032 14.5 0.0 0.051 13.8 0.0 1.4 1 0 0 1 1 1 0 Ste50p, sterile alpha motif IQ PF00612.27 ORF66666 - 0.00069 19.2 1.4 0.002 17.8 0.7 2.1 2 0 0 2 2 2 1 IQ calmodulin-binding motif DUF1338 PF07063.13 ORF6495 - 0.16 11.1 0.5 0.2 10.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) PUA_3 PF17785.1 ORF64396 - 0.075 12.9 0.0 0.45 10.4 0.0 2.3 2 1 0 2 2 2 0 PUA-like domain DOMON PF03351.17 ORF64147 - 1e-10 41.9 0.0 1.4e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 DOMON domain CBM9_1 PF06452.11 ORF64069 - 0.007 16.3 0.1 0.01 15.8 0.1 1.2 1 0 0 1 1 1 1 Carbohydrate family 9 binding domain-like MORN PF02493.20 ORF63877 - 0.0001 22.0 1.4 0.0001 22.0 1.4 4.6 6 0 0 6 6 6 2 MORN repeat Totivirus_coat PF05518.11 ORF62912 - 0.036 12.1 0.2 0.045 11.8 0.2 1.0 1 0 0 1 1 1 0 Totivirus coat protein zf-MYND PF01753.18 ORF6175 - 1.2e-07 31.7 12.0 1.9e-07 31.1 12.0 1.3 1 0 0 1 1 1 1 MYND finger zf-C6H2 PF15801.5 ORF6175 - 0.2 12.0 6.2 0.36 11.2 6.2 1.4 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding zf-Mss51 PF13824.6 ORF6175 - 1.7 8.8 15.0 0.16 12.1 8.6 2.5 2 2 2 4 4 4 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF3364 PF11844.8 ORF61488 - 0.014 15.6 4.4 0.048 13.9 4.4 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) GAGA_bind PF06217.12 ORF61488 - 0.65 10.2 7.6 0.69 10.2 7.6 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Ribosomal_L18p PF00861.22 ORF61488 - 0.86 10.0 5.7 0.29 11.5 3.1 1.5 2 0 0 2 2 2 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SopA PF13981.6 ORF59600 - 0.095 13.1 0.4 0.27 11.6 0.1 1.8 2 0 0 2 2 2 0 SopA-like central domain Ank_2 PF12796.7 ORF59538 - 4.7e-22 78.4 0.3 2.4e-16 60.1 0.1 2.6 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF59538 - 4.8e-18 65.0 6.3 7.5e-10 38.9 0.5 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF59538 - 1.4e-17 63.2 2.1 1.2e-05 25.5 0.0 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF59538 - 3.8e-13 48.3 0.0 0.0058 17.0 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF59538 - 1.8e-12 47.5 0.1 1.1e-06 29.0 0.0 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Atg14 PF10186.9 ORF57609 - 0.00014 21.1 9.3 0.00017 20.8 9.3 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 UPF0242 PF06785.11 ORF57609 - 0.0039 17.3 11.2 0.0046 17.1 11.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus AAA_13 PF13166.6 ORF57609 - 0.0048 15.6 11.3 0.0054 15.4 11.3 1.0 1 0 0 1 1 1 1 AAA domain Seadorna_VP6 PF07407.11 ORF57609 - 0.0065 15.5 2.9 0.0071 15.3 2.9 1.1 1 0 0 1 1 1 1 Seadornavirus VP6 protein DUF4686 PF15742.5 ORF57609 - 0.0066 15.6 8.7 0.0066 15.6 8.7 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4686) GP57 PF17594.2 ORF57609 - 0.057 13.2 0.1 0.16 11.8 0.1 1.7 1 1 0 1 1 1 0 Phage Tail fiber assembly helper gene product 57 Fez1 PF06818.15 ORF57609 - 0.075 13.5 12.5 0.73 10.3 12.5 2.0 1 1 0 1 1 1 0 Fez1 Tup_N PF08581.10 ORF57609 - 0.16 12.3 9.8 0.12 12.7 4.2 2.6 2 1 0 2 2 2 0 Tup N-terminal PRKG1_interact PF15898.5 ORF57609 - 0.18 12.7 11.8 0.87 10.5 1.5 2.4 2 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain PEX11 PF05648.14 ORF57609 - 0.24 10.8 2.9 0.43 10.0 2.7 1.6 1 1 1 2 2 2 0 Peroxisomal biogenesis factor 11 (PEX11) CENP-F_leu_zip PF10473.9 ORF57609 - 0.45 10.5 15.6 0.25 11.4 10.9 1.9 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 APG6_N PF17675.1 ORF57609 - 0.53 10.8 14.5 0.48 10.9 13.9 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF724 PF05266.14 ORF57609 - 0.69 9.7 14.9 0.81 9.5 10.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF3573 PF12097.8 ORF57609 - 1.9 7.2 5.2 0.89 8.3 1.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3573) YabA PF06156.13 ORF57609 - 2.4 8.9 9.7 5.4 7.7 6.2 2.5 1 1 1 2 2 2 0 Initiation control protein YabA TMPIT PF07851.13 ORF57609 - 4.7 6.4 10.2 0.8 8.9 6.0 1.7 2 0 0 2 2 2 0 TMPIT-like protein DivIC PF04977.15 ORF57609 - 5.5 6.8 15.2 1.4 8.8 1.5 3.1 1 1 2 3 3 3 0 Septum formation initiator bZIP_2 PF07716.15 ORF57609 - 6.7 6.9 12.4 17 5.6 0.5 3.3 3 0 0 3 3 3 0 Basic region leucine zipper DUF4993 PF16384.5 ORF54260 - 0.14 11.1 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function Totivirus_coat PF05518.11 ORF54228 - 0.036 12.1 0.2 0.045 11.8 0.2 1.0 1 0 0 1 1 1 0 Totivirus coat protein TPR_12 PF13424.6 ORF53897 - 6.1e-17 61.7 13.7 8e-09 35.7 0.1 2.2 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF53897 - 9e-13 47.6 1.5 0.0013 18.6 0.1 3.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF53897 - 3.4e-07 29.8 2.8 0.00057 19.7 0.1 3.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF53897 - 0.00065 19.6 5.3 0.086 13.0 0.1 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_5 PF12688.7 ORF53897 - 0.0027 17.9 0.4 0.0063 16.7 0.4 1.6 1 1 0 1 1 1 1 Tetratrico peptide repeat MIT PF04212.18 ORF53897 - 0.0037 17.3 0.2 0.56 10.3 0.0 2.7 2 1 1 3 3 3 1 MIT (microtubule interacting and transport) domain Anticodon_1 PF08264.13 ORF53897 - 0.013 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA TPR_1 PF00515.28 ORF53897 - 0.043 13.7 2.7 3.3 7.7 0.1 3.0 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF53897 - 0.048 14.5 3.4 5.9 8.0 0.1 2.8 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF53897 - 0.048 14.3 4.2 0.18 12.5 2.7 2.4 2 1 0 2 2 2 0 Tetratricopeptide repeat UPF0047 PF01894.17 ORF50247 - 1.8e-37 128.0 0.0 2.1e-37 127.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 MORN PF02493.20 ORF49563 - 1.3e-05 24.8 15.2 0.00032 20.4 2.5 4.9 5 0 0 5 5 5 2 MORN repeat E_Pc_C PF06752.12 ORF49525 - 1.8 8.6 6.6 1.9 8.5 6.6 1.1 1 0 0 1 1 1 0 Enhancer of Polycomb C-terminus DOMON PF03351.17 ORF48938 - 1.1e-10 41.8 0.0 1.4e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 DOMON domain Trp_syntA PF00290.20 ORF46230 - 0.069 12.0 0.1 0.089 11.6 0.1 1.1 1 0 0 1 1 1 0 Tryptophan synthase alpha chain Interfer-bind PF09294.10 ORF44020 - 0.034 14.5 0.7 0.59 10.5 0.8 2.1 2 0 0 2 2 2 0 Interferon-alpha/beta receptor, fibronectin type III Metallothio_Euk PF12749.7 ORF43786 - 1 9.6 10.9 0.097 12.8 5.5 1.9 2 0 0 2 2 2 0 Eukaryotic metallothionein ECSIT PF06239.11 ORF42829 - 0.053 12.6 1.4 0.7 9.0 0.1 2.1 1 1 0 2 2 2 0 Evolutionarily conserved signalling intermediate in Toll pathway MFS_1 PF07690.16 ORF42696 - 0.00036 19.6 3.5 0.00042 19.4 3.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3135 PF11333.8 ORF36927 - 0.46 10.8 6.5 2.7 8.3 2.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3135) HECT PF00632.25 ORF36777 - 5.2e-17 62.3 0.0 6.3e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) E3_UFM1_ligase PF09743.9 ORF36777 - 0.095 12.3 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 SFTA2 PF15210.6 ORF36777 - 0.13 12.2 0.2 0.26 11.2 0.0 1.6 2 0 0 2 2 2 0 Surfactant-associated protein 2 EGF_CA PF07645.15 ORF36110 - 0.094 12.9 1.9 0.17 12.1 1.9 1.5 1 0 0 1 1 1 0 Calcium-binding EGF domain Sigma54_activ_2 PF14532.6 ORF36110 - 0.16 12.1 0.0 0.33 11.1 0.0 1.5 1 1 0 1 1 1 0 Sigma-54 interaction domain RPM2 PF08579.11 ORF35954 - 0.071 13.5 0.1 0.14 12.6 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial ribonuclease P subunit (RPM2) S4 PF01479.25 ORF35426 - 1.8e-06 27.5 0.0 3.1e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 S4 domain tRNA-synt_1b PF00579.25 ORF35426 - 0.0024 17.3 0.1 0.0033 16.8 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) CCDC92 PF14916.6 ORF34919 - 0.045 13.5 0.6 0.045 13.5 0.6 2.3 2 1 1 3 3 3 0 Coiled-coil domain of unknown function DUF4094 PF13334.6 ORF34919 - 0.14 12.6 3.8 0.063 13.7 1.4 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) Mu-like_Pro PF10123.9 ORF34919 - 0.2 11.1 1.8 0.22 11.1 1.8 1.1 1 0 0 1 1 1 0 Mu-like prophage I protein Laminin_II PF06009.12 ORF34919 - 0.23 11.4 9.4 0.25 11.4 8.2 1.6 1 1 0 1 1 1 0 Laminin Domain II Jnk-SapK_ap_N PF09744.9 ORF34919 - 0.26 11.5 7.6 0.33 11.2 7.6 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 TolA_bind_tri PF16331.5 ORF34919 - 1 9.5 6.6 0.11 12.6 0.7 2.2 2 2 0 2 2 2 0 TolA binding protein trimerisation NPV_P10 PF05531.12 ORF34919 - 2.1 8.9 9.6 0.96 10.0 4.4 2.3 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein PSCyt3 PF07627.11 ORF3356 - 0.063 13.6 0.3 0.14 12.5 0.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1588) Histone PF00125.24 ORF3350 - 8.3e-45 152.4 8.0 1.5e-44 151.5 8.0 1.4 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 ORF3350 - 3.2e-05 24.2 0.0 6.5e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF3350 - 0.00011 22.2 0.1 0.00021 21.4 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TFIID-31kDa PF02291.15 ORF3350 - 0.095 12.8 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit DUF2992 PF11208.8 ORF3350 - 3.3 7.9 7.7 35 4.7 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2992) DUF1338 PF07063.13 ORF32482 - 0.16 11.1 0.5 0.2 10.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) FAM183 PF14886.6 ORF31218 - 4.2e-27 95.0 2.4 5.2e-27 94.7 2.4 1.1 1 0 0 1 1 1 1 FAM183A and FAM183B related LLC1 PF14945.6 ORF31218 - 0.014 16.0 0.5 0.019 15.5 0.5 1.4 1 0 0 1 1 1 0 Normal lung function maintenance, Low in Lung Cancer 1 protein DUF3051 PF11252.8 ORF28630 - 0.25 11.0 0.0 0.33 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3051) CobW_C PF07683.14 ORF26723 - 1.1e-17 63.8 0.0 1.6e-17 63.2 0.0 1.2 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain N-glycanase_C PF09113.10 ORF26474 - 0.038 13.7 0.5 0.079 12.7 0.5 1.6 1 1 1 2 2 2 0 Peptide-N-glycosidase F, C terminal DUF2285 PF10074.9 ORF26474 - 0.076 13.7 0.0 0.11 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) Ribosomal_S7 PF00177.21 ORF23133 - 1.5e-35 122.0 3.5 1.7e-35 121.9 3.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e DOMON PF03351.17 ORF21981 - 1e-10 41.9 0.0 1.4e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 DOMON domain TTL PF03133.15 ORF21959 - 1.9e-18 66.7 0.2 2.1e-18 66.5 0.2 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF21959 - 2.6e-07 30.1 0.1 3.1e-07 29.9 0.1 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF21959 - 0.013 14.7 0.0 0.016 14.5 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp RimK PF08443.11 ORF21959 - 0.069 12.7 0.1 0.13 11.9 0.1 1.4 1 1 0 1 1 1 0 RimK-like ATP-grasp domain MNNL PF07657.13 ORF21419 - 2.3 8.3 10.3 0.47 10.5 4.1 2.1 2 0 0 2 2 2 0 N terminus of Notch ligand T3SchapCesA PF11439.8 ORF18642 - 0.12 12.5 1.4 0.83 9.8 0.1 2.2 2 0 0 2 2 2 0 Type III secretion system filament chaperone CesA DOMON PF03351.17 ORF18425 - 1.1e-10 41.8 0.0 1.4e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 DOMON domain Metallophos_2 PF12850.7 ORF1796 - 0.019 15.2 1.3 0.023 14.9 1.3 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain GDE_N_bis PF14742.6 ORF16989 - 0.089 12.3 0.3 0.11 12.1 0.3 1.2 1 0 0 1 1 1 0 N-terminal domain of (some) glycogen debranching enzymes Ank_4 PF13637.6 ORF152812 - 1.8e-14 53.9 0.1 2.8e-09 37.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF152812 - 2.8e-10 40.6 0.0 3.3e-05 24.4 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF152812 - 1.8e-09 37.6 0.1 0.0005 20.3 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF152812 - 1.1e-07 31.5 0.0 0.041 14.4 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF152812 - 3.9e-06 27.1 0.4 0.075 13.5 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks174.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks174.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks174.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks174.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:21 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2618 PF10940.8 ORF151276 - 1 9.2 4.7 0.26 11.1 1.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) COBRA1 PF06209.13 ORF149329 - 0.078 11.8 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Cofactor of BRCA1 (COBRA1) Ank_5 PF13857.6 ORF146135 - 9.5e-11 41.7 0.1 1.7e-10 40.9 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF146135 - 9.6e-11 42.0 0.0 3.2e-09 37.1 0.0 2.4 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF146135 - 3.5e-10 40.3 0.0 7.4e-10 39.3 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF146135 - 4.3e-10 39.0 0.1 5.3e-06 26.4 0.1 3.5 3 1 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF146135 - 1.7e-08 34.6 0.4 8e-06 26.1 0.2 2.5 2 0 0 2 2 2 2 Ankyrin repeat B9-C2 PF07162.11 ORF145494 - 4.2e-09 36.8 0.0 5.5e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Response_reg PF00072.24 ORF145288 - 4.9e-31 107.2 0.1 5.9e-31 106.9 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain EGF PF00008.27 ORF145207 - 0.069 13.5 0.9 0.15 12.4 0.9 1.5 1 0 0 1 1 1 0 EGF-like domain DOMON PF03351.17 ORF144552 - 1e-10 41.9 0.0 1.4e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 DOMON domain DUF4695 PF15766.5 ORF144201 - 0.27 11.5 5.0 0.37 11.0 2.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4695) adh_short_C2 PF13561.6 ORF142165 - 3e-27 95.7 0.1 4e-24 85.5 0.1 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF142165 - 7.5e-15 54.9 0.1 1e-14 54.4 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase K_oxygenase PF13434.6 ORF137861 - 0.79 8.8 8.4 0.98 8.5 8.4 1.1 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) DDE_Tnp_1 PF01609.21 ORF137861 - 2.8 7.5 13.5 0.11 12.1 1.5 2.0 1 1 1 2 2 2 0 Transposase DDE domain Med26_C PF15693.5 ORF137861 - 4 7.6 12.1 4.9 7.3 12.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 26 C-terminal DUF1631 PF07793.11 ORF137847 - 0.75 8.1 9.1 0.85 8.0 9.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) DUF285 PF03382.14 ORF136608 - 0.064 13.0 0.2 0.089 12.6 0.2 1.4 1 0 0 1 1 1 0 Mycoplasma protein of unknown function, DUF285 DUF4640 PF15480.6 ORF134909 - 0.013 15.3 5.8 0.013 15.2 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4640) Mucin15 PF15672.5 ORF134909 - 0.017 14.7 7.9 0.017 14.6 7.9 1.1 1 0 0 1 1 1 0 Cell-membrane associated Mucin15 DUF3539 PF12058.8 ORF134909 - 0.022 14.9 0.8 0.058 13.5 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3539) DUF1338 PF07063.13 ORF134886 - 0.16 11.1 0.5 0.2 10.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) Sybindin PF04099.12 ORF134528 - 6.1e-42 142.9 1.5 6.8e-42 142.8 1.5 1.0 1 0 0 1 1 1 1 Sybindin-like family Sedlin_N PF04628.13 ORF134528 - 2.7e-11 43.7 1.2 2.9e-11 43.6 1.2 1.2 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region Flavodoxin_1 PF00258.25 ORF13415 - 4.4e-23 82.1 0.0 4.9e-23 81.9 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin FMN_red PF03358.15 ORF13415 - 0.075 12.8 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 NADPH-dependent FMN reductase Phosphodiest PF01663.22 ORF13415 - 0.19 11.3 0.0 0.24 10.9 0.0 1.1 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase RNHCP PF12647.7 ORF132699 - 0.02 14.9 0.6 0.076 13.0 0.0 1.9 2 0 0 2 2 2 0 RNHCP domain DUF983 PF06170.12 ORF132699 - 0.24 11.8 1.2 0.52 10.8 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF983) UQ_con PF00179.26 ORF131838 - 1e-33 115.9 0.2 1.2e-33 115.7 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UPF1_Zn_bind PF09416.10 ORF131838 - 0.029 14.3 0.0 0.042 13.8 0.0 1.2 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) SDF PF00375.18 ORF131480 - 3.4e-41 141.6 8.2 3.8e-41 141.4 8.2 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family EMP70 PF02990.16 ORF13113 - 0.1 11.3 0.9 0.099 11.3 0.9 1.2 1 0 0 1 1 1 0 Endomembrane protein 70 DUF3051 PF11252.8 ORF128773 - 0.25 11.0 0.0 0.33 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3051) Apelin PF15360.6 ORF128145 - 0.0048 17.4 2.2 0.016 15.7 2.2 2.0 1 0 0 1 1 1 1 APJ endogenous ligand DUF1440 PF07274.12 ORF127996 - 0.12 12.7 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1440) cEGF PF12662.7 ORF12705 - 0.62 10.0 6.3 1 9.3 1.1 2.7 2 0 0 2 2 2 0 Complement Clr-like EGF-like PAN_4 PF14295.6 ORF127045 - 0.068 13.1 0.9 0.25 11.3 0.3 2.0 2 0 0 2 2 2 0 PAN domain Ax_dynein_light PF10211.9 ORF126240 - 1.4e-59 201.2 14.0 1.5e-59 201.1 14.0 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF126240 - 0.00032 21.2 6.1 0.00045 20.7 6.1 1.2 1 0 0 1 1 1 1 Syntaxin 6, N-terminal LegC3_N PF18654.1 ORF126240 - 0.00057 19.2 6.5 0.00065 19.0 6.5 1.1 1 0 0 1 1 1 1 LegC3 N-terminal coiled-coil domain DUF4988 PF16378.5 ORF126240 - 0.026 14.2 2.5 0.044 13.5 2.5 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF724 PF05266.14 ORF126240 - 0.026 14.3 10.8 0.038 13.8 10.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ZapB PF06005.12 ORF126240 - 0.029 14.8 13.4 0.061 13.8 13.4 1.5 1 0 0 1 1 1 0 Cell division protein ZapB DUF4527 PF15030.6 ORF126240 - 0.052 13.0 2.8 0.064 12.7 2.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) FapA PF03961.13 ORF126240 - 0.099 11.2 9.6 0.11 11.1 9.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A STAT_alpha PF01017.20 ORF126240 - 0.1 12.5 10.4 0.17 11.8 10.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain XhlA PF10779.9 ORF126240 - 0.11 12.7 6.5 0.27 11.5 6.5 1.6 1 0 0 1 1 1 0 Haemolysin XhlA DUF3450 PF11932.8 ORF126240 - 0.13 11.5 6.6 0.18 11.1 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DivIC PF04977.15 ORF126240 - 0.26 11.1 13.6 0.067 13.0 7.2 2.4 1 1 1 2 2 2 0 Septum formation initiator GrpE PF01025.19 ORF126240 - 1.1 8.9 14.4 0.99 9.0 13.4 1.4 2 0 0 2 2 2 0 GrpE DUF4164 PF13747.6 ORF126240 - 1.3 9.3 11.3 4 7.8 1.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) KIP1 PF07765.12 ORF126240 - 1.7 8.8 8.8 4.2 7.6 8.5 1.8 1 1 0 1 1 1 0 KIP1-like protein DUF5320 PF17253.2 ORF126240 - 2 9.5 7.7 5.2 8.2 1.7 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5320) APG6_N PF17675.1 ORF126240 - 7.2 7.1 17.4 12 6.5 17.4 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region RCC1_2 PF13540.6 ORF12563 - 0.0043 16.8 9.8 2.1 8.2 0.9 3.7 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 ORF12563 - 0.2 10.1 0.5 19 3.6 0.0 2.7 1 1 1 3 3 3 0 Putative S-adenosyl-L-methionine-dependent methyltransferase CATSPERG PF15064.6 ORF123774 - 0.12 10.2 1.2 0.16 9.8 1.2 1.1 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit gamma Ribonuclease_P PF00825.18 ORF12207 - 3.3e-32 110.9 0.3 4.1e-32 110.5 0.3 1.1 1 0 0 1 1 1 1 Ribonuclease P Acp26Ab PF05777.12 ORF11908 - 0.031 14.9 0.7 0.055 14.1 0.7 1.4 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) RRM_1 PF00076.22 ORF117937 - 2.9e-16 59.0 0.9 1.2e-15 57.0 0.9 2.0 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF117937 - 0.00048 20.2 0.1 0.00079 19.5 0.1 1.4 1 0 0 1 1 1 1 RNA recognition motif PHM7_cyt PF14703.6 ORF117937 - 0.00077 19.7 7.6 0.0047 17.2 0.1 2.9 1 1 2 3 3 3 2 Cytosolic domain of 10TM putative phosphate transporter SLATT_5 PF18160.1 ORF117937 - 2.3 7.5 5.1 3.5 6.9 5.1 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 BHD_1 PF10403.9 ORF117157 - 0.0046 16.8 0.1 0.0081 16.0 0.1 1.5 1 1 0 1 1 1 1 Rad4 beta-hairpin domain 1 SpoIIIAH PF12685.7 ORF117157 - 0.0082 16.0 4.3 0.0096 15.8 4.3 1.2 1 1 0 1 1 1 1 SpoIIIAH-like protein Crl PF07417.12 ORF116054 - 2.9e-53 179.0 0.1 3.4e-53 178.8 0.1 1.0 1 0 0 1 1 1 1 Sigma factor-binding transcriptional regulator Crl Myosin_N PF02736.19 ORF114654 - 0.15 12.0 0.0 18 5.3 0.0 2.4 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain DOMON PF03351.17 ORF113520 - 1e-10 41.9 0.0 1.4e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 DOMON domain Putative_PNPOx PF01243.20 ORF113154 - 0.057 13.6 0.0 0.09 13.0 0.0 1.3 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase ATP_sub_h PF10775.9 ORF11262 - 0.056 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 ATP synthase complex subunit h DUF4975 PF16346.5 ORF11262 - 0.058 13.5 0.1 0.086 12.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4975) MORN PF02493.20 ORF111627 - 9.2e-07 28.4 12.7 2.5e-05 23.9 2.2 4.7 4 0 0 4 4 4 2 MORN repeat DUF5124 PF17160.4 ORF111627 - 0.0067 17.2 0.3 0.012 16.4 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF5124) uDENN PF03456.18 ORF110816 - 0.00013 22.7 0.2 0.00013 22.7 0.2 2.2 2 1 0 2 2 2 1 uDENN domain Chordopox_A13L PF05961.11 ORF110816 - 0.0056 16.9 2.1 0.028 14.6 0.2 2.3 2 0 0 2 2 2 1 Chordopoxvirus A13L protein DUF775 PF05603.12 ORF107404 - 0.012 15.1 0.1 0.015 14.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF775) DUF4834 PF16118.5 ORF107404 - 0.73 10.8 2.7 1.1 10.2 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) AAA_lid_7 PF17867.1 ORF10618 - 0.064 13.5 0.0 0.097 12.9 0.0 1.3 1 0 0 1 1 1 0 Midasin AAA lid domain Ras PF00071.22 ORF104352 - 1.7e-21 76.5 0.5 2.2e-21 76.1 0.5 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF104352 - 6.2e-16 58.7 0.5 7.6e-16 58.4 0.5 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF104352 - 2.1e-07 31.0 0.1 2.5e-07 30.8 0.1 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF104352 - 0.008 15.7 0.1 0.3 10.6 0.1 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain LYTB PF02401.18 ORF104352 - 0.0098 15.2 0.2 0.014 14.7 0.2 1.4 1 1 0 1 1 1 1 LytB protein SRPRB PF09439.10 ORF104352 - 0.017 14.5 0.1 0.023 14.2 0.1 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Chromo_2 PF18704.1 ORF103951 - 0.051 13.8 0.2 0.099 12.9 0.2 1.5 1 0 0 1 1 1 0 Chromatin organization modifier domain 2 LuxS PF02664.15 ORF101910 - 2.2e-51 173.6 0.0 2.6e-51 173.4 0.0 1.0 1 0 0 1 1 1 1 S-Ribosylhomocysteinase (LuxS) DUF749 PF05370.11 ORF101910 - 0.091 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF749) Med27 PF11571.8 ORF101756 - 0.32 11.4 3.2 0.53 10.7 3.2 1.4 1 0 0 1 1 1 0 Mediator complex subunit 27 2TM PF13239.6 NODE_45152_length_436_cov_1.633416_g37386_i0forward_frame_1 - 0.89 9.9 6.4 1.4 9.2 6.4 1.3 1 0 0 1 1 1 0 2TM domain LRR_5 PF13306.6 NODE_45147_length_436_cov_2.356608_g37381_i0reverse_frame_1 - 0.076 13.0 2.2 0.11 12.5 2.2 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) DUF2285 PF10074.9 NODE_45141_length_436_cov_2.962594_g37375_i0forward_frame_1 - 0.92 10.2 9.8 0.79 10.4 3.1 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2285) PRA1 PF03208.19 NODE_45135_length_436_cov_3.982544_g37369_i0forward_frame_1 - 0.93 9.1 10.6 0.045 13.4 5.3 1.5 2 0 0 2 2 2 0 PRA1 family protein DUF2244 PF10003.9 NODE_45135_length_436_cov_3.982544_g37369_i0forward_frame_1 - 3.7 7.2 5.4 2.4 7.8 3.1 1.9 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) Vert_HS_TF PF06546.11 NODE_45130_length_436_cov_44.663342_g37364_i0forward_frame_1 - 0.11 12.2 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Vertebrate heat shock transcription factor Nodulin_late PF07127.11 NODE_45123_length_436_cov_68.708229_g37357_i0forward_frame_1 - 1.8 9.0 4.5 3.9 7.9 4.5 1.6 1 0 0 1 1 1 0 Late nodulin protein Ribosomal_L34e PF01199.18 NODE_45117_length_436_cov_78.361596_g37351_i0reverse_frame_1 - 3.9e-41 139.2 5.9 3.9e-41 139.2 5.9 1.9 2 0 0 2 2 2 1 Ribosomal protein L34e DUF1848 PF08902.11 NODE_45117_length_436_cov_78.361596_g37351_i0reverse_frame_1 - 0.036 13.8 0.6 0.043 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1848) zf-3CxxC_2 PF17180.4 NODE_45117_length_436_cov_78.361596_g37351_i0reverse_frame_1 - 0.12 13.1 0.9 0.12 13.1 0.9 2.0 2 0 0 2 2 2 0 Zinc-binding domain DUF1977 PF09320.11 NODE_45117_length_436_cov_78.361596_g37351_i0reverse_frame_1 - 0.8 10.0 6.8 4.4 7.6 6.8 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF1977) DUF4672 PF15716.5 NODE_45102_length_436_cov_138.473815_g37336_i0forward_frame_1 - 2.3 7.8 10.1 0.77 9.4 0.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4672) MT PF12777.7 NODE_45094_length_436_cov_198.917706_g32584_i1reverse_frame_1 - 2.3e-06 26.9 0.5 2.6e-06 26.7 0.5 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor LRAT PF04970.13 NODE_45088_length_436_cov_743.775561_g31025_i1reverse_frame_1 - 0.00041 20.7 0.0 0.00055 20.2 0.0 1.3 1 0 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 NODE_45088_length_436_cov_743.775561_g31025_i1reverse_frame_1 - 0.0057 16.5 1.3 0.014 15.2 1.3 1.7 1 1 0 1 1 1 1 PPPDE putative peptidase domain MitoNEET_N PF10660.9 NODE_45083_length_436_cov_9863.099751_g37321_i0reverse_frame_1 - 2.7 8.1 8.5 6.2 6.9 1.0 2.3 2 0 0 2 2 2 0 Iron-containing outer mitochondrial membrane protein N-terminus CLAMP PF14769.6 NODE_45073_length_437_cov_2.601990_g37311_i0reverse_frame_1 - 0.59 10.6 6.8 0.38 11.2 0.9 2.3 2 1 0 2 2 2 0 Flagellar C1a complex subunit C1a-32 HECT PF00632.25 NODE_45071_length_437_cov_2.793532_g37309_i0reverse_frame_1 - 1.8e-29 103.2 2.0 2e-29 103.1 2.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) LysE PF01810.18 NODE_45071_length_437_cov_2.793532_g37309_i0forward_frame_1 - 0.054 13.0 1.2 0.11 12.0 0.2 1.8 2 0 0 2 2 2 0 LysE type translocator Tlr3_TMD PF17968.1 NODE_45070_length_437_cov_2.853234_g37308_i0forward_frame_1 - 0.14 12.3 1.3 0.43 10.8 0.0 2.2 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain DUF1496 PF07383.12 NODE_45065_length_437_cov_3.062189_g37303_i0reverse_frame_1 - 1.9e-23 81.7 0.6 3.7e-23 80.9 0.6 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1496) Conotoxin_I2 PF17557.2 NODE_45064_length_437_cov_3.196517_g37302_i0reverse_frame_1 - 2.1 8.5 11.8 1 9.5 7.0 2.4 2 0 0 2 2 2 0 I2-superfamily conotoxins HHH_6 PF14579.6 NODE_45060_length_437_cov_3.480100_g37298_i0reverse_frame_1 - 2.3e-08 34.2 0.0 4.2e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif DNA_pol3_finger PF17657.1 NODE_45060_length_437_cov_3.480100_g37298_i0reverse_frame_1 - 2e-05 24.0 0.5 2.8e-05 23.5 0.5 1.3 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain DUF2256 PF10013.9 NODE_45047_length_437_cov_78.119403_g37285_i0reverse_frame_1 - 0.098 12.8 3.1 7.5 6.8 0.1 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) SANT_DAMP1_like PF16282.5 NODE_45033_length_437_cov_148.761194_g37273_i0forward_frame_1 - 0.0081 16.3 0.1 0.0081 16.3 0.1 1.8 2 0 0 2 2 2 1 SANT/Myb-like domain of DAMP1 SDA1 PF05285.12 NODE_45033_length_437_cov_148.761194_g37273_i0forward_frame_1 - 0.033 13.6 3.8 0.031 13.7 3.8 1.1 1 0 0 1 1 1 0 SDA1 Ion_trans PF00520.31 NODE_45011_length_438_cov_1.836228_g37251_i0reverse_frame_1 - 1.6e-09 37.4 7.2 2.1e-09 37.0 7.2 1.1 1 0 0 1 1 1 1 Ion transport protein Glyco_trans_2_3 PF13632.6 NODE_45008_length_438_cov_2.121588_g37248_i0forward_frame_1 - 0.77 9.6 4.1 1 9.3 4.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase family group 2 Pkinase PF00069.25 NODE_45005_length_438_cov_2.528536_g37245_i0reverse_frame_1 - 8e-12 45.1 0.1 9.8e-12 44.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_45005_length_438_cov_2.528536_g37245_i0reverse_frame_1 - 0.0004 19.8 0.1 0.00045 19.6 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF5502 PF17606.2 NODE_45005_length_438_cov_2.528536_g37245_i0forward_frame_1 - 0.049 14.3 0.6 0.078 13.7 0.6 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5502) Fer4_20 PF14691.6 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 8.9e-28 96.3 2.8 1.1e-27 96.1 2.8 1.1 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_2 PF12797.7 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 0.051 13.7 2.3 0.051 13.7 2.3 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_7 PF12838.7 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 0.31 11.7 0.2 0.31 11.7 0.2 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 0.48 10.6 11.3 4.3 7.5 11.4 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 NODE_44999_length_438_cov_2.957816_g37239_i0reverse_frame_1 - 6.3 7.1 13.3 1.7 8.8 2.0 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain Ribosomal_L36 PF00444.18 NODE_44997_length_438_cov_3.508685_g37237_i0reverse_frame_1 - 1.7 8.9 4.0 5 7.4 4.0 1.8 1 1 0 1 1 1 0 Ribosomal protein L36 RuBisCO_small PF00101.20 NODE_44996_length_438_cov_4.081886_g37236_i0reverse_frame_1 - 0.074 13.0 0.1 0.36 10.8 0.1 1.9 1 1 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain SLC12 PF03522.15 NODE_44993_length_438_cov_10.178660_g37233_i0reverse_frame_1 - 5.9 5.8 15.6 6.7 5.6 15.6 1.0 1 0 0 1 1 1 0 Solute carrier family 12 Helicase_IV_N PF12462.8 NODE_44979_length_438_cov_87.325062_g37219_i0reverse_frame_1 - 0.062 13.2 0.2 0.087 12.8 0.2 1.1 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal MtmB PF05369.12 NODE_44979_length_438_cov_87.325062_g37219_i0reverse_frame_1 - 0.11 11.3 0.1 0.14 11.0 0.1 1.1 1 0 0 1 1 1 0 Monomethylamine methyltransferase MtmB PEARLI-4 PF05278.12 NODE_44972_length_438_cov_102.650124_g37212_i0reverse_frame_1 - 0.21 11.2 0.1 0.26 10.8 0.1 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) MMM1 PF10296.9 NODE_44967_length_438_cov_133.007444_g37207_i0forward_frame_1 - 0.12 11.4 0.5 0.13 11.3 0.5 1.1 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 SR-25 PF10500.9 NODE_44967_length_438_cov_133.007444_g37207_i0forward_frame_1 - 0.83 9.2 21.7 1.2 8.7 21.7 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Apt1 PF10351.9 NODE_44967_length_438_cov_133.007444_g37207_i0forward_frame_1 - 6.7 5.5 10.3 7.9 5.2 10.3 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF4604 PF15377.6 NODE_44955_length_438_cov_254.315136_g37195_i0reverse_frame_1 - 0.36 11.2 31.2 0.46 10.9 31.2 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4604) Spore_coat_CotO PF14153.6 NODE_44955_length_438_cov_254.315136_g37195_i0reverse_frame_1 - 1.8 8.4 20.1 2.2 8.2 20.1 1.0 1 0 0 1 1 1 0 Spore coat protein CotO Presenilin PF01080.17 NODE_44955_length_438_cov_254.315136_g37195_i0reverse_frame_1 - 4.1 6.1 6.2 4 6.1 6.2 1.0 1 0 0 1 1 1 0 Presenilin RNA_pol_Rpa2_4 PF06883.12 NODE_44952_length_438_cov_322.384615_g37193_i0forward_frame_1 - 1.1 9.3 2.7 51 4.0 0.0 3.2 4 1 1 5 5 5 0 RNA polymerase I, Rpa2 specific domain zf-C3HC4_3 PF13920.6 NODE_44947_length_438_cov_584.637717_g37189_i0forward_frame_1 - 2.1e-06 27.5 4.8 2.1e-06 27.5 4.8 1.9 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_44947_length_438_cov_584.637717_g37189_i0forward_frame_1 - 0.019 14.8 2.6 0.045 13.6 2.6 1.7 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 DinB PF05163.12 NODE_44938_length_438_cov_5199.518610_g30442_i3reverse_frame_1 - 0.071 13.0 0.5 0.12 12.3 0.5 1.3 1 0 0 1 1 1 0 DinB family Podoplanin PF05808.11 NODE_44938_length_438_cov_5199.518610_g30442_i3forward_frame_1 - 0.036 14.2 0.1 0.049 13.7 0.1 1.2 1 0 0 1 1 1 0 Podoplanin YjbE PF11106.8 NODE_44938_length_438_cov_5199.518610_g30442_i3forward_frame_1 - 0.99 9.7 8.5 0.28 11.4 5.2 1.7 1 1 1 2 2 2 0 Exopolysaccharide production protein YjbE Uso1_p115_C PF04871.13 NODE_44932_length_439_cov_1.913366_g37178_i0reverse_frame_3 - 0.16 12.3 7.2 0.26 11.7 7.2 1.3 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region FXMRP1_C_core PF12235.8 NODE_44932_length_439_cov_1.913366_g37178_i0reverse_frame_2 - 0.0059 17.3 3.3 0.0082 16.8 3.3 1.1 1 0 0 1 1 1 1 Fragile X-related 1 protein core C terminal TBCA PF02970.16 NODE_44932_length_439_cov_1.913366_g37178_i0reverse_frame_2 - 0.035 14.4 4.4 0.063 13.6 4.4 1.5 1 0 0 1 1 1 0 Tubulin binding cofactor A DivIC PF04977.15 NODE_44932_length_439_cov_1.913366_g37178_i0reverse_frame_2 - 0.86 9.4 4.5 0.38 10.6 1.3 1.9 1 1 1 2 2 2 0 Septum formation initiator ADIP PF11559.8 NODE_44932_length_439_cov_1.913366_g37178_i0reverse_frame_2 - 1.5 8.9 17.9 0.035 14.2 8.9 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding SRP-alpha_N PF04086.13 NODE_44926_length_439_cov_2.801980_g37172_i0reverse_frame_3 - 5 7.0 8.0 5.8 6.8 8.0 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal DBINO PF13892.6 NODE_44926_length_439_cov_2.801980_g37172_i0reverse_frame_2 - 2.8 8.3 7.0 1.1 9.6 4.5 1.6 1 1 0 1 1 1 0 DNA-binding domain VIT1 PF01988.19 NODE_44926_length_439_cov_2.801980_g37172_i0forward_frame_2 - 0.51 10.2 2.5 7.4 6.4 2.5 2.5 1 1 0 1 1 1 0 VIT family Mqo PF06039.15 NODE_44922_length_439_cov_3.777228_g37168_i0reverse_frame_3 - 1.2e-29 103.3 0.3 1.5e-29 102.9 0.3 1.1 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) Phospholamban PF04272.14 NODE_44922_length_439_cov_3.777228_g37168_i0forward_frame_2 - 0.078 12.5 1.7 0.42 10.1 0.5 2.3 2 0 0 2 2 2 0 Phospholamban PapC_C PF13953.6 NODE_44920_length_439_cov_4.121287_g37166_i0reverse_frame_3 - 1e-06 28.4 0.1 1.8e-06 27.7 0.1 1.3 1 0 0 1 1 1 1 PapC C-terminal domain Hydrolase PF00702.26 NODE_44918_length_439_cov_6.920792_g37164_i0reverse_frame_3 - 0.00031 21.1 0.0 0.00045 20.6 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase EcKinase PF02958.20 NODE_44917_length_439_cov_34.608911_g37163_i0forward_frame_2 - 0.0094 15.3 0.2 0.011 15.0 0.2 1.2 1 0 0 1 1 1 1 Ecdysteroid kinase AP3D1 PF06375.11 NODE_44916_length_439_cov_38.900990_g37162_i0reverse_frame_2 - 0.076 13.2 7.6 0.11 12.7 7.6 1.3 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF443 PF04276.12 NODE_44916_length_439_cov_38.900990_g37162_i0forward_frame_2 - 0.3 10.9 17.8 0.22 11.3 16.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF443) PH_6 PF15406.6 NODE_44912_length_439_cov_59.549505_g37158_i0reverse_frame_3 - 0.043 14.1 0.3 0.093 13.0 0.2 1.6 1 1 0 1 1 1 0 Pleckstrin homology domain SopA PF13981.6 NODE_44912_length_439_cov_59.549505_g37158_i0reverse_frame_3 - 0.066 13.6 0.5 0.092 13.2 0.5 1.2 1 0 0 1 1 1 0 SopA-like central domain Carbam_trans_C PF16861.5 NODE_44906_length_439_cov_83.091584_g37152_i0reverse_frame_3 - 0.032 13.8 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 Carbamoyltransferase C-terminus adh_short_C2 PF13561.6 NODE_44904_length_439_cov_85.195545_g37150_i0reverse_frame_2 - 7.7e-14 51.8 0.1 1.5e-13 50.8 0.0 1.4 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase Defensin_int PF17858.1 NODE_44904_length_439_cov_85.195545_g37150_i0forward_frame_2 - 0.056 13.4 1.5 0.62 10.1 0.1 2.3 2 0 0 2 2 2 0 Platypus intermediate defensin-like peptide SR-25 PF10500.9 NODE_44894_length_439_cov_166.732673_g37141_i0reverse_frame_2 - 0.011 15.4 10.6 0.013 15.1 10.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HA PF03457.14 NODE_44891_length_439_cov_217.856436_g37138_i0forward_frame_3 - 0.029 14.7 2.6 0.054 13.8 2.6 1.4 1 0 0 1 1 1 0 Helicase associated domain ER PF01133.17 NODE_44890_length_439_cov_223.324257_g37137_i0reverse_frame_3 - 9e-39 131.5 0.1 1.1e-38 131.2 0.1 1.1 1 0 0 1 1 1 1 Enhancer of rudimentary zf-CCCH_4 PF18044.1 NODE_44890_length_439_cov_223.324257_g37137_i0forward_frame_2 - 0.058 13.2 0.4 0.058 13.2 0.4 3.8 3 1 0 3 3 3 0 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_44890_length_439_cov_223.324257_g37137_i0forward_frame_2 - 0.12 12.4 5.7 0.27 11.4 0.5 3.6 3 0 0 3 3 3 0 Zinc finger domain PBP_sp32 PF07222.12 NODE_44871_length_440_cov_2.340741_g37118_i0reverse_frame_2 - 0.12 11.8 0.4 0.2 11.1 0.0 1.5 2 0 0 2 2 2 0 Proacrosin binding protein sp32 Flavi_NS1 PF00948.21 NODE_44854_length_440_cov_59.935802_g37101_i0reverse_frame_2 - 0.052 12.4 0.5 0.06 12.2 0.5 1.1 1 0 0 1 1 1 0 Flavivirus non-structural Protein NS1 DUF3687 PF12459.8 NODE_44852_length_440_cov_62.266667_g37099_i0reverse_frame_2 - 1.3 8.6 6.6 5.8 6.5 1.3 2.3 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein RebB PF11747.8 NODE_44844_length_440_cov_91.133333_g37091_i0reverse_frame_3 - 0.098 12.8 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 Killing trait FANCD2OS PF15124.6 NODE_44844_length_440_cov_91.133333_g37091_i0forward_frame_2 - 0.08 13.1 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 FANCD2 opposite strand protein DNA_pol_P_Exo PF18049.1 NODE_44827_length_440_cov_249.992593_g37074_i0forward_frame_2 - 0.13 11.6 0.1 0.16 11.3 0.1 1.2 1 0 0 1 1 1 0 DNA polymerase nu pseudo-exo SH3_11 PF18103.1 NODE_44824_length_440_cov_274.550617_g37071_i0reverse_frame_3 - 0.11 12.7 0.4 0.59 10.3 0.1 2.0 2 0 0 2 2 2 0 Retroviral integrase C-terminal SH3 domain zf-RING_UBOX PF13445.6 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 1.1e-05 25.3 1.4 1.1e-05 25.3 1.4 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 0.0004 20.3 7.2 0.0014 18.5 7.2 2.0 1 1 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 0.0019 18.5 7.3 0.013 15.8 7.2 2.2 1 1 1 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 0.013 15.4 2.5 0.013 15.4 2.5 2.8 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 0.049 13.5 1.3 0.049 13.5 1.3 3.0 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Med27 PF11571.8 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 0.11 12.8 5.0 4.4 7.7 0.1 3.0 2 2 1 3 3 3 0 Mediator complex subunit 27 zf_UBZ PF18439.1 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 0.17 11.5 0.1 0.17 11.5 0.1 2.8 3 1 0 3 3 3 0 Ubiquitin-Binding Zinc Finger DZR PF12773.7 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 0.38 10.8 5.0 3.8 7.6 5.0 2.3 1 1 0 1 1 1 0 Double zinc ribbon Prok-RING_4 PF14447.6 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 0.49 10.3 9.3 3.8 7.4 9.3 2.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-ribbon_3 PF13248.6 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 2.4 7.7 0.0 2.4 7.7 0.0 3.2 3 1 0 3 3 3 0 zinc-ribbon domain FYVE PF01363.21 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 3.5 7.8 8.8 20 5.4 8.8 2.2 1 1 0 1 1 1 0 FYVE zinc finger zf-C3HC4_4 PF15227.6 NODE_44822_length_440_cov_404.106173_g37069_i0forward_frame_3 - 5.5 7.2 9.4 1.7 8.9 4.6 2.5 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING HypA PF01155.19 NODE_44820_length_440_cov_683.572840_g37067_i0reverse_frame_3 - 0.051 13.6 3.1 0.067 13.2 3.1 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3644 PF12358.8 NODE_44820_length_440_cov_683.572840_g37067_i0reverse_frame_3 - 0.85 10.1 4.2 1.7 9.2 1.9 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3644) PRELI PF04707.14 NODE_44820_length_440_cov_683.572840_g37067_i0reverse_frame_2 - 0.021 14.7 0.2 0.033 14.0 0.2 1.3 1 0 0 1 1 1 0 PRELI-like family Curlin_rpt PF07012.12 NODE_44809_length_441_cov_2.692118_g37057_i0reverse_frame_3 - 1.8e-22 79.0 26.6 4.1e-10 39.5 3.6 3.9 1 1 3 4 4 4 4 Curlin associated repeat DUF2389 PF09493.10 NODE_44808_length_441_cov_2.751232_g37056_i0forward_frame_3 - 0.0047 17.5 0.1 0.0092 16.6 0.1 1.5 1 1 0 1 1 1 1 Tryptophan-rich protein (DUF2389) DicB PF05358.11 NODE_44808_length_441_cov_2.751232_g37056_i0forward_frame_2 - 0.12 12.6 0.1 0.21 11.8 0.1 1.3 1 0 0 1 1 1 0 DicB protein Cript PF10235.9 NODE_44802_length_441_cov_3.344828_g37050_i0forward_frame_2 - 0.51 10.9 10.8 0.14 12.8 7.1 1.9 2 0 0 2 2 2 0 Microtubule-associated protein CRIPT LMBR1 PF04791.16 NODE_44800_length_441_cov_4.721675_g37048_i0forward_frame_3 - 4.4e-15 55.6 20.3 4.8e-15 55.5 20.3 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein PTPLA PF04387.14 NODE_44800_length_441_cov_4.721675_g37048_i0forward_frame_2 - 0.057 13.2 0.1 0.97 9.2 0.0 1.9 1 1 1 2 2 2 0 Protein tyrosine phosphatase-like protein, PTPLA DUF1772 PF08592.11 NODE_44798_length_441_cov_11.982759_g37046_i0reverse_frame_2 - 0.26 11.6 0.0 0.26 11.6 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1772) DUF5436 PF17504.2 NODE_44796_length_441_cov_26.886700_g37044_i0reverse_frame_2 - 0.14 12.5 6.6 0.27 11.6 6.6 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5436) cNMP_binding PF00027.29 NODE_44796_length_441_cov_26.886700_g37044_i0forward_frame_2 - 0.0084 16.2 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Hep_core_N PF08290.11 NODE_44790_length_441_cov_66.290640_g37038_i0reverse_frame_2 - 0.015 15.2 1.7 0.045 13.7 1.7 1.8 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger HWE_HK PF07536.14 NODE_44785_length_441_cov_82.721675_g37033_i0forward_frame_3 - 0.1 13.3 0.0 0.19 12.4 0.0 1.5 1 0 0 1 1 1 0 HWE histidine kinase MCR_gamma PF02240.16 NODE_44785_length_441_cov_82.721675_g37033_i0forward_frame_2 - 0.12 11.6 0.1 0.15 11.3 0.1 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase gamma subunit ParBc PF02195.18 NODE_44782_length_441_cov_89.775862_g37030_i0forward_frame_2 - 0.00041 20.6 0.1 0.0049 17.1 0.0 2.1 2 0 0 2 2 2 1 ParB-like nuclease domain AflR PF08493.10 NODE_44781_length_441_cov_91.211823_g37029_i0forward_frame_2 - 0.17 11.3 3.7 0.074 12.5 0.8 1.8 2 0 0 2 2 2 0 Aflatoxin regulatory protein PsaM PF07465.13 NODE_44776_length_441_cov_122.970443_g37024_i0reverse_frame_2 - 1.3 8.8 9.3 1.8 8.4 1.6 2.5 2 1 0 2 2 2 0 Photosystem I protein M (PsaM) DUF3135 PF11333.8 NODE_44773_length_441_cov_141.391626_g37021_i0forward_frame_2 - 0.14 12.5 0.1 0.2 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) MEF2_binding PF09047.10 NODE_44769_length_441_cov_149.172414_g37017_i0reverse_frame_2 - 0.12 12.3 1.0 0.24 11.3 1.0 1.4 1 0 0 1 1 1 0 MEF2 binding COX7C PF02935.16 NODE_44769_length_441_cov_149.172414_g37017_i0reverse_frame_2 - 0.18 12.1 13.0 0.43 10.9 13.0 1.7 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc DUF4013 PF13197.6 NODE_44765_length_441_cov_157.731527_g37013_i0reverse_frame_3 - 0.019 14.8 0.1 0.029 14.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) eIF3_subunit PF08597.10 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 0.079 12.9 24.4 0.092 12.6 24.4 1.3 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit MAT1 PF06391.13 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 0.58 9.9 16.4 0.69 9.7 16.4 1.1 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 Red1 PF07964.11 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 3.8 5.6 6.7 4.2 5.5 6.7 1.1 1 0 0 1 1 1 0 Rec10 / Red1 NPAT_C PF15712.5 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 5.4 5.5 9.7 5.4 5.5 9.7 1.0 1 0 0 1 1 1 0 NPAT C terminus NARP1 PF12569.8 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 5.4 5.8 16.5 6.3 5.6 16.5 1.2 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 VSG_B PF13206.6 NODE_44754_length_441_cov_677.529557_g37004_i0forward_frame_3 - 9.6 5.3 16.3 11 5.2 16.3 1.1 1 0 0 1 1 1 0 Trypanosomal VSG domain SHIPPO-rpt PF07004.12 ORF99409 - 0.01 16.7 20.3 0.42 11.6 0.2 4.0 3 2 0 3 3 3 3 Sperm-tail PG-rich repeat APG6_N PF17675.1 ORF99217 - 2.1e-05 25.1 3.8 3e-05 24.5 3.8 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region Med4 PF10018.9 ORF99217 - 0.00025 20.8 5.1 0.0003 20.5 5.1 1.2 1 0 0 1 1 1 1 Vitamin-D-receptor interacting Mediator subunit 4 DUF1664 PF07889.12 ORF99217 - 0.0053 16.8 3.8 0.0075 16.3 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) PHTB1_C PF14728.6 ORF99217 - 0.0056 15.8 0.4 0.0063 15.7 0.4 1.1 1 0 0 1 1 1 1 PTHB1 C-terminus Flagellin_N PF00669.20 ORF99217 - 0.0057 16.8 1.4 0.0079 16.3 1.4 1.1 1 0 0 1 1 1 1 Bacterial flagellin N-terminal helical region COG6 PF06419.11 ORF99217 - 0.0074 14.6 7.4 0.009 14.3 7.4 1.1 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 ASD2 PF08687.11 ORF99217 - 0.012 15.2 4.4 0.014 15.0 4.4 1.1 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 PIN_12 PF16289.5 ORF99217 - 0.015 15.8 7.6 0.018 15.6 7.6 1.1 1 0 0 1 1 1 0 PIN domain Dynactin_p62 PF05502.13 ORF99217 - 0.019 13.8 2.3 0.02 13.7 2.3 1.0 1 0 0 1 1 1 0 Dynactin p62 family CALCOCO1 PF07888.11 ORF99217 - 0.024 13.5 5.2 0.025 13.5 5.2 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like TMPIT PF07851.13 ORF99217 - 0.025 13.9 5.2 0.028 13.7 5.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein End3 PF12761.7 ORF99217 - 0.057 13.6 6.1 0.064 13.4 6.1 1.1 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 SseC PF04888.12 ORF99217 - 0.075 12.6 3.7 0.094 12.3 3.7 1.1 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family UPF0242 PF06785.11 ORF99217 - 0.082 13.0 7.6 0.11 12.6 7.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Atg14 PF10186.9 ORF99217 - 0.12 11.5 5.3 0.13 11.3 5.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 USP8_interact PF08941.10 ORF99217 - 0.13 12.0 4.4 0.19 11.5 4.4 1.1 1 0 0 1 1 1 0 USP8 interacting HAUS6_N PF14661.6 ORF99217 - 0.26 10.8 5.6 0.37 10.3 5.6 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF2570 PF10828.8 ORF99217 - 1.6 8.6 10.3 2.6 7.9 10.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) Fib_alpha PF08702.10 ORF99217 - 4.3 7.5 12.2 1.1 9.5 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family YabA PF06156.13 ORF99217 - 5.3 7.7 9.0 10 6.8 9.0 1.7 1 1 0 1 1 1 0 Initiation control protein YabA CRISPR_assoc PF08798.11 ORF98885 - 0.0098 16.0 0.0 0.011 15.8 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein DCR PF14047.6 ORF98013 - 0.016 15.4 0.0 0.039 14.2 0.0 1.7 1 0 0 1 1 1 0 Dppa2/4 conserved region Zn_ribbon_SprT PF17283.2 ORF98013 - 0.07 13.1 2.3 0.32 11.0 1.4 2.4 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Mob_Pre PF01076.19 ORF94823 - 0.084 12.7 5.7 0.11 12.4 5.7 1.1 1 0 0 1 1 1 0 Plasmid recombination enzyme # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks175.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks175.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks175.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks175.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:09:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- F-box PF00646.33 ORF93919 - 0.0026 17.6 0.1 0.0051 16.7 0.1 1.5 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 ORF93919 - 0.0095 15.8 0.1 0.016 15.1 0.1 1.4 1 0 0 1 1 1 1 F-box-like Mob_Pre PF01076.19 ORF92900 - 0.084 12.7 5.7 0.11 12.4 5.7 1.1 1 0 0 1 1 1 0 Plasmid recombination enzyme DUF5085 PF16895.5 ORF85946 - 0.013 15.8 0.5 1.7 9.0 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5085) Maelstrom PF13017.6 ORF85946 - 0.036 13.7 0.8 0.045 13.4 0.7 1.3 1 1 0 1 1 1 0 piRNA pathway germ-plasm component NUDE_C PF04880.13 ORF85647 - 0.16 12.5 0.7 0.21 12.1 0.7 1.2 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region DUF745 PF05335.13 ORF8546 - 0.054 13.2 4.2 0.042 13.6 2.6 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF745) HAGH_C PF16123.5 ORF8546 - 0.076 13.5 5.3 0.19 12.2 1.0 2.2 2 0 0 2 2 2 0 Hydroxyacylglutathione hydrolase C-terminus Med21 PF11221.8 ORF8546 - 0.094 13.0 11.4 0.052 13.8 9.4 1.6 1 1 1 2 2 2 0 Subunit 21 of Mediator complex G10 PF01125.17 ORF8546 - 0.36 10.6 6.1 0.24 11.2 4.4 1.5 1 1 1 2 2 2 0 G10 protein Membralin PF09746.9 ORF8546 - 2.3 7.2 9.0 4.9 6.1 9.0 1.6 1 1 0 1 1 1 0 Tumour-associated protein RED_C PF07807.11 ORF8485 - 0.027 14.9 0.9 0.036 14.5 0.9 1.3 1 0 0 1 1 1 0 RED-like protein C-terminal region DUF2873 PF11395.8 ORF8485 - 0.064 13.1 2.9 0.064 13.1 2.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) DUF2357 PF09823.9 ORF84482 - 0.098 11.9 0.1 0.14 11.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2357) CUTL PF16557.5 ORF84482 - 4.3 7.6 8.4 2.9 8.1 5.8 2.1 1 1 1 2 2 2 0 CUT1-like DNA-binding domain of SATB DUF656 PF04920.12 ORF83796 - 0.073 13.0 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF656) P_C PF06640.11 ORF8337 - 0.002 18.3 0.9 0.0024 18.0 0.9 1.2 1 0 0 1 1 1 1 P protein C-terminus WASH-7_mid PF14744.6 ORF82963 - 0.013 14.6 1.4 0.016 14.3 1.4 1.1 1 0 0 1 1 1 0 WASH complex subunit 7 A_amylase_inhib PF01356.19 ORF82617 - 0.00018 21.4 0.7 0.00032 20.6 0.7 1.5 1 0 0 1 1 1 1 Alpha amylase inhibitor DUF4113 PF13438.6 ORF81268 - 4.6 7.4 5.8 6.1 7.0 0.1 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4113) EIIA-man PF03610.16 ORF81039 - 5.7e-30 103.9 0.0 6.5e-30 103.7 0.0 1.0 1 0 0 1 1 1 1 PTS system fructose IIA component SCRG1 PF15224.6 ORF80182 - 0.052 13.7 0.9 0.052 13.7 0.9 1.9 2 0 0 2 2 2 0 Scrapie-responsive protein 1 DUF1106 PF06523.11 ORF78976 - 0.003 17.5 1.0 0.019 15.0 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1106) Pkinase PF00069.25 ORF78964 - 0.00042 19.8 0.0 0.00057 19.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Fer4_9 PF13187.6 ORF77808 - 0.24 11.6 7.2 2.6 8.3 7.1 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Sigma_1s PF02454.16 ORF76871 - 0.03 14.3 0.6 0.038 14.0 0.6 1.2 1 0 0 1 1 1 0 Sigma 1s protein Aldedh PF00171.22 ORF76492 - 0.093 11.2 0.0 0.1 11.1 0.0 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family DUF2358 PF10184.9 ORF75266 - 5.8e-08 33.0 0.0 6.7e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2358) SnoaL_2 PF12680.7 ORF75266 - 0.014 16.0 0.0 0.027 15.1 0.0 1.6 1 1 0 1 1 1 0 SnoaL-like domain Epiglycanin_C PF14654.6 ORF75266 - 0.08 13.0 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region PP-binding_2 PF14573.6 ORF74586 - 0.00016 21.8 2.2 0.00027 21.1 2.2 1.5 1 1 0 1 1 1 1 Acyl-carrier Ribosomal_L50 PF10501.9 ORF74586 - 0.00023 21.3 0.9 0.00033 20.8 0.9 1.2 1 0 0 1 1 1 1 Ribosomal subunit 39S PP-binding PF00550.25 ORF74586 - 0.0013 19.0 0.1 0.0028 18.0 0.1 1.5 1 0 0 1 1 1 1 Phosphopantetheine attachment site Sedlin_N PF04628.13 ORF72364 - 8.5e-34 116.5 5.4 3.4e-33 114.5 5.4 1.8 1 1 0 1 1 1 1 Sedlin, N-terminal conserved region Sybindin PF04099.12 ORF72364 - 6.8e-07 29.3 0.6 8.3e-07 29.0 0.6 1.2 1 0 0 1 1 1 1 Sybindin-like family PPP4R2 PF09184.11 ORF71779 - 5.5 6.5 28.7 7.8 6.0 28.7 1.2 1 0 0 1 1 1 0 PPP4R2 zf-CCCH PF00642.24 ORF70839 - 0.29 11.1 2.9 0.87 9.6 0.2 2.4 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) F-box PF00646.33 ORF70431 - 0.43 10.5 8.4 4.5 7.3 0.5 2.7 2 0 0 2 2 2 0 F-box domain ApoO PF09769.9 ORF69730 - 0.059 13.3 0.1 0.086 12.8 0.1 1.2 1 0 0 1 1 1 0 Apolipoprotein O APG6_N PF17675.1 ORF69506 - 2.1e-05 25.1 3.8 3e-05 24.5 3.8 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region Med4 PF10018.9 ORF69506 - 0.00025 20.8 5.1 0.0003 20.5 5.1 1.2 1 0 0 1 1 1 1 Vitamin-D-receptor interacting Mediator subunit 4 DUF1664 PF07889.12 ORF69506 - 0.0053 16.8 3.8 0.0075 16.3 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) PHTB1_C PF14728.6 ORF69506 - 0.0056 15.8 0.4 0.0063 15.7 0.4 1.1 1 0 0 1 1 1 1 PTHB1 C-terminus Flagellin_N PF00669.20 ORF69506 - 0.0057 16.8 1.4 0.0079 16.3 1.4 1.1 1 0 0 1 1 1 1 Bacterial flagellin N-terminal helical region COG6 PF06419.11 ORF69506 - 0.0074 14.6 7.4 0.009 14.3 7.4 1.1 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 ASD2 PF08687.11 ORF69506 - 0.012 15.2 4.4 0.014 15.0 4.4 1.1 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 PIN_12 PF16289.5 ORF69506 - 0.015 15.8 7.6 0.018 15.6 7.6 1.1 1 0 0 1 1 1 0 PIN domain Dynactin_p62 PF05502.13 ORF69506 - 0.019 13.8 2.3 0.02 13.7 2.3 1.0 1 0 0 1 1 1 0 Dynactin p62 family CALCOCO1 PF07888.11 ORF69506 - 0.024 13.5 5.2 0.025 13.5 5.2 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like TMPIT PF07851.13 ORF69506 - 0.025 13.9 5.2 0.028 13.7 5.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein End3 PF12761.7 ORF69506 - 0.057 13.6 6.1 0.064 13.4 6.1 1.1 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 SseC PF04888.12 ORF69506 - 0.075 12.6 3.7 0.094 12.3 3.7 1.1 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family UPF0242 PF06785.11 ORF69506 - 0.082 13.0 7.6 0.11 12.6 7.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Atg14 PF10186.9 ORF69506 - 0.12 11.5 5.3 0.13 11.3 5.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 USP8_interact PF08941.10 ORF69506 - 0.13 12.0 4.4 0.19 11.5 4.4 1.1 1 0 0 1 1 1 0 USP8 interacting HAUS6_N PF14661.6 ORF69506 - 0.26 10.8 5.6 0.37 10.3 5.6 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF2570 PF10828.8 ORF69506 - 1.6 8.6 10.3 2.6 7.9 10.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) Fib_alpha PF08702.10 ORF69506 - 4.3 7.5 12.2 1.1 9.5 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family YabA PF06156.13 ORF69506 - 5.3 7.7 9.0 10 6.8 9.0 1.7 1 1 0 1 1 1 0 Initiation control protein YabA Cytochrom_C PF00034.21 ORF67726 - 7.7e-07 30.2 0.3 6.2e-06 27.3 0.3 2.0 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF67726 - 2.5e-06 27.7 0.7 4.2e-05 23.8 0.7 2.1 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF67726 - 0.085 12.6 0.1 0.16 11.7 0.1 1.4 1 0 0 1 1 1 0 Cytochrome c-550 domain LepA_C PF06421.12 ORF67235 - 8.5e-27 93.4 0.5 1.2e-26 93.0 0.5 1.2 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus EFG_C PF00679.24 ORF67235 - 8.4e-17 61.0 0.0 1.2e-16 60.5 0.0 1.3 1 0 0 1 1 1 1 Elongation factor G C-terminus Ribosomal_S19 PF00203.21 ORF67002 - 9.1e-30 102.4 0.1 1.4e-29 101.8 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 DUF3781 PF12636.7 ORF66083 - 0.12 12.2 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) IBN_N PF03810.19 ORF65771 - 0.14 12.0 0.0 0.29 11.1 0.0 1.5 2 0 0 2 2 2 0 Importin-beta N-terminal domain DUF2397 PF09660.10 ORF64053 - 0.00019 20.5 0.4 0.00021 20.3 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2397) EzrA PF06160.12 ORF64053 - 0.0013 17.0 3.3 0.0013 17.0 3.3 1.3 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA WXG100 PF06013.12 ORF64053 - 0.0059 16.8 0.2 0.011 16.0 0.2 1.4 1 0 0 1 1 1 1 Proteins of 100 residues with WXG GldM_N PF12081.8 ORF64053 - 0.042 13.9 3.5 0.058 13.5 3.5 1.3 1 0 0 1 1 1 0 GldM N-terminal domain DUF948 PF06103.11 ORF64053 - 0.051 13.8 0.5 0.12 12.6 0.5 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) CdvA PF18822.1 ORF64053 - 0.075 12.9 5.1 0.066 13.0 1.8 2.0 2 0 0 2 2 2 0 CdvA-like coiled-coil domain YlqD PF11068.8 ORF64053 - 0.078 13.3 2.1 0.1 13.0 2.1 1.3 1 0 0 1 1 1 0 YlqD protein FlxA PF14282.6 ORF64053 - 0.13 12.2 5.7 0.78 9.8 0.7 2.2 1 1 1 2 2 2 0 FlxA-like protein Laminin_II PF06009.12 ORF64053 - 0.26 11.3 3.7 0.43 10.6 2.4 1.9 1 1 1 2 2 2 0 Laminin Domain II Fzo_mitofusin PF04799.13 ORF64053 - 0.31 10.6 3.3 0.55 9.8 3.3 1.4 1 1 0 1 1 1 0 fzo-like conserved region Wbp11 PF09429.10 ORF64053 - 0.31 11.5 4.1 0.69 10.3 3.0 2.1 1 1 0 1 1 1 0 WW domain binding protein 11 FapA PF03961.13 ORF64053 - 0.32 9.6 4.3 0.39 9.3 4.3 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF1657 PF07870.11 ORF64053 - 1.5 8.7 5.4 0.51 10.3 0.2 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF1657) bZIP_1 PF00170.21 ORF64053 - 3.9 7.7 7.6 0.38 10.9 0.3 2.6 2 1 1 3 3 3 0 bZIP transcription factor DNA_pol_delta_4 PF04081.13 ORF63951 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 Sec23_BS PF08033.12 ORF63238 - 2.7e-08 34.5 0.1 4.6e-08 33.7 0.1 1.4 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain DUF4918 PF16265.5 ORF63238 - 0.015 14.9 0.3 0.02 14.4 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) Sec23_helical PF04815.15 ORF63238 - 0.051 13.4 0.0 0.078 12.8 0.0 1.3 1 0 0 1 1 1 0 Sec23/Sec24 helical domain DUF4538 PF15061.6 ORF62550 - 0.016 14.9 3.8 0.1 12.4 0.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) Bax1-I PF01027.20 ORF62550 - 0.19 11.6 14.7 0.34 10.7 14.7 1.5 1 1 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DNA_pol_delta_4 PF04081.13 ORF62239 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 Ribosomal_L7Ae PF01248.26 ORF61163 - 3.4e-23 81.2 0.8 6.2e-23 80.4 0.8 1.5 1 1 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Adeno_E3_CR1 PF02440.15 ORF61163 - 0.015 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 ATPase_2 PF01637.18 ORF61163 - 0.045 13.7 1.2 0.054 13.4 0.9 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TPR_15 PF13429.6 ORF61163 - 0.05 12.8 0.0 0.068 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF5444 PF17519.2 ORF61093 - 0.68 10.0 2.2 3.8 7.6 0.3 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5444) SidE PF12252.8 ORF60694 - 0.002 15.8 9.0 0.0024 15.5 9.0 1.0 1 0 0 1 1 1 1 Dot/Icm substrate protein HIP1_clath_bdg PF16515.5 ORF60694 - 1 10.0 12.7 0.2 12.3 7.6 2.1 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF1151 PF06625.11 ORF60694 - 1.2 9.0 13.0 7.3 6.6 13.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1151) DBD_Tnp_Hermes PF10683.9 ORF60363 - 0.19 11.5 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 Hermes transposase DNA-binding domain DUF4995 PF16386.5 ORF60055 - 0.32 11.0 3.8 0.18 11.8 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function TAF6_C PF07571.13 ORF59753 - 0.051 13.9 0.0 0.097 13.0 0.0 1.4 1 0 0 1 1 1 0 TAF6 C-terminal HEAT repeat domain DUF5336 PF17270.2 ORF53431 - 0.56 9.8 2.4 0.95 9.1 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5336) ROK PF00480.20 ORF53340 - 4.8e-27 95.2 0.0 5.4e-27 95.0 0.0 1.0 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 ORF53340 - 0.0036 16.4 0.0 0.0046 16.0 0.0 1.1 1 0 0 1 1 1 1 Glucokinase Ribosomal_L34 PF00468.17 ORF52238 - 0.00068 19.5 10.6 0.0041 17.1 6.7 2.3 1 1 1 2 2 2 2 Ribosomal protein L34 Clathrin PF00637.20 ORF52139 - 0.029 14.2 1.1 0.04 13.8 1.1 1.1 1 0 0 1 1 1 0 Region in Clathrin and VPS DRAT PF07357.11 ORF51277 - 0.023 13.9 0.3 0.037 13.2 0.3 1.3 1 1 0 1 1 1 0 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) Peptidase_M50 PF02163.22 ORF48358 - 0.97 8.6 8.0 0.82 8.9 7.0 1.4 1 1 0 1 1 1 0 Peptidase family M50 CBM77 PF18283.1 ORF48358 - 8.6 6.8 10.3 1.5 9.2 5.7 1.9 2 0 0 2 2 2 0 Carbohydrate binding module 77 DNA_pol_delta_4 PF04081.13 ORF4742 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 Ribosomal_L34 PF00468.17 ORF4709 - 0.00068 19.5 10.6 0.0041 17.1 6.7 2.3 1 1 1 2 2 2 2 Ribosomal protein L34 Pyr_excise PF03013.14 ORF45948 - 0.074 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Pyrimidine dimer DNA glycosylase Sex_peptide PF08138.11 ORF44974 - 0.32 11.2 0.2 0.32 11.2 0.2 2.6 3 1 0 3 3 3 0 Sex peptide (SP) family IR1-M PF12185.8 ORF44661 - 2.8 8.0 4.3 16 5.5 0.4 2.3 2 0 0 2 2 2 0 Nup358/RanBP2 E3 ligase domain Barwin PF00967.17 ORF41790 - 0.14 12.0 1.0 0.19 11.6 0.7 1.4 1 1 0 1 1 1 0 Barwin family MauE PF07291.11 ORF41538 - 0.11 12.3 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Methylamine utilisation protein MauE SCP_3 PF17844.1 ORF40818 - 0.12 12.1 0.2 1.1 9.1 0.0 2.0 2 0 0 2 2 2 0 Bacterial SCP ortholog DUF3220 PF11516.8 ORF39841 - 0.11 12.7 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) PC-Esterase PF13839.6 ORF3715 - 0.097 12.4 2.4 0.16 11.7 2.4 1.3 1 0 0 1 1 1 0 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Ribosomal_S19 PF00203.21 ORF36683 - 9.1e-30 102.4 0.1 1.4e-29 101.8 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Doppel PF11466.8 ORF36369 - 0.073 12.7 0.1 0.19 11.4 0.1 1.7 1 0 0 1 1 1 0 Prion-like protein Doppel DNA_pol_delta_4 PF04081.13 ORF35882 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 DUF1057 PF06342.12 ORF34904 - 0.064 12.3 0.0 0.076 12.0 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Phtf-FEM1B_bdg PF12129.8 ORF34262 - 2.5 7.9 5.8 1.4 8.7 3.5 1.6 1 1 1 2 2 2 0 Male germ-cell putative homeodomain transcription factor LYRIC PF15686.5 ORF34251 - 0.037 13.6 4.4 0.044 13.3 4.4 1.0 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family Peptidase_A21 PF03566.13 ORF3425 - 0.0029 15.9 0.1 0.0032 15.8 0.1 1.0 1 0 0 1 1 1 1 Peptidase family A21 zf-C3HC4_3 PF13920.6 ORF31486 - 3.4e-08 33.2 11.4 4.8e-08 32.7 11.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF31486 - 9.3e-07 29.1 15.1 1.5e-06 28.5 15.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF31486 - 2.2e-06 27.4 15.5 4.1e-06 26.6 15.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF31486 - 2.6e-06 27.3 13.4 4.4e-06 26.5 13.4 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF31486 - 1.5e-05 24.8 10.0 3.4e-05 23.6 10.0 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF31486 - 2.5e-05 24.0 14.9 4.1e-05 23.3 14.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF31486 - 0.00025 21.0 12.6 0.014 15.4 8.3 2.4 2 0 0 2 2 2 2 RING-type zinc-finger zf-rbx1 PF12678.7 ORF31486 - 0.00084 19.6 14.2 0.0014 18.9 12.9 2.2 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF31486 - 0.011 15.9 13.4 0.058 13.6 13.8 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF31486 - 0.014 15.4 4.8 0.027 14.5 4.8 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_6 PF14835.6 ORF31486 - 0.71 9.8 10.9 3.8 7.5 10.9 2.0 1 1 0 1 1 1 0 zf-RING of BARD1-type protein DUF4995 PF16386.5 ORF31311 - 0.32 11.0 3.8 0.18 11.8 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function Ribosomal_L7Ae PF01248.26 ORF29133 - 3.4e-23 81.2 0.8 6.2e-23 80.4 0.8 1.5 1 1 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Adeno_E3_CR1 PF02440.15 ORF29133 - 0.015 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 ATPase_2 PF01637.18 ORF29133 - 0.045 13.7 1.2 0.054 13.4 0.9 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TPR_15 PF13429.6 ORF29133 - 0.05 12.8 0.0 0.068 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Peptidase_S24 PF00717.23 ORF25762 - 8.8e-12 44.8 0.0 1.3e-11 44.3 0.0 1.3 1 0 0 1 1 1 1 Peptidase S24-like DNA_pol_delta_4 PF04081.13 ORF25276 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 DUF973 PF06157.11 ORF24318 - 0.034 13.2 5.6 0.041 12.9 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) CCDC106 PF15794.5 ORF24318 - 0.057 13.1 0.0 0.085 12.6 0.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Wx5_PLAF3D7 PF09688.10 ORF22990 - 0.015 15.3 0.3 0.023 14.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (Wx5_PLAF3D7) TMIE PF16038.5 ORF22990 - 0.041 13.7 1.9 0.041 13.7 1.9 2.2 2 0 0 2 2 2 0 TMIE protein DUF4231 PF14015.6 ORF2242 - 0.045 14.2 1.0 0.11 12.9 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) zf-LITAF-like PF10601.9 ORF18467 - 2.9e-16 59.5 18.3 4e-16 59.0 18.3 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain HYR PF02494.16 ORF16643 - 0.00022 21.5 1.6 0.00032 20.9 1.0 1.6 1 1 0 1 1 1 1 HYR domain DUF3069 PF11269.8 ORF152667 - 0.034 14.4 0.7 0.052 13.8 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3069) Lys-AminoMut_A PF09043.11 ORF152667 - 0.039 12.4 0.0 0.042 12.3 0.0 1.1 1 0 0 1 1 1 0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit CFC PF09443.10 ORF152348 - 0.26 11.2 0.5 0.26 11.2 0.5 2.7 2 1 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) Ribosomal_L7Ae PF01248.26 ORF151895 - 3.4e-23 81.2 0.8 6.2e-23 80.4 0.8 1.5 1 1 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Adeno_E3_CR1 PF02440.15 ORF151895 - 0.015 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 ATPase_2 PF01637.18 ORF151895 - 0.045 13.7 1.2 0.054 13.4 0.9 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TPR_15 PF13429.6 ORF151895 - 0.05 12.8 0.0 0.068 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat PRTase_3 PF15610.6 ORF15126 - 0.2 10.8 0.0 0.27 10.5 0.0 1.1 1 0 0 1 1 1 0 PRTase ComF-like Ribosomal_L7Ae PF01248.26 ORF147733 - 3.4e-23 81.2 0.8 6.2e-23 80.4 0.8 1.5 1 1 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Adeno_E3_CR1 PF02440.15 ORF147733 - 0.015 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 ATPase_2 PF01637.18 ORF147733 - 0.045 13.7 1.2 0.054 13.4 0.9 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TPR_15 PF13429.6 ORF147733 - 0.05 12.8 0.0 0.068 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Cas_Cas6 PF01881.16 ORF14767 - 0.012 16.2 4.3 0.019 15.5 4.3 1.5 1 1 0 1 1 1 0 CRISPR associated protein Cas6 zf-HC3 PF16827.5 ORF147626 - 0.99 9.7 10.3 1.7 8.9 0.3 3.5 2 2 2 4 4 4 0 zinc-finger IR1-M PF12185.8 ORF147114 - 2.8 8.0 4.3 16 5.5 0.4 2.3 2 0 0 2 2 2 0 Nup358/RanBP2 E3 ligase domain PsbK PF02533.15 ORF143023 - 2.6e-20 72.3 6.4 5.5e-20 71.2 6.4 1.5 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component DUF3488 PF11992.8 ORF143023 - 0.21 10.5 4.0 0.32 9.9 0.8 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3488) Aldedh PF00171.22 ORF140005 - 0.093 11.2 0.0 0.1 11.1 0.0 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family eIF-5_eIF-2B PF01873.17 ORF13935 - 0.057 13.3 0.1 0.16 11.9 0.0 1.7 1 1 1 2 2 2 0 Domain found in IF2B/IF5 DUF3045 PF11243.8 ORF13935 - 0.093 12.9 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3045) WD40 PF00400.32 ORF139227 - 8.3e-06 26.5 0.1 0.038 14.9 0.0 2.8 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF139227 - 0.023 15.0 0.0 0.061 13.6 0.0 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Ribosomal_60s PF00428.19 ORF139185 - 0.13 12.9 1.4 0.19 12.3 1.4 1.2 1 0 0 1 1 1 0 60s Acidic ribosomal protein Mito_fiss_reg PF05308.11 ORF139185 - 5 7.1 8.6 7.6 6.5 8.6 1.3 1 0 0 1 1 1 0 Mitochondrial fission regulator RNase_H2_suC PF08615.11 ORF138624 - 0.056 13.6 0.2 0.09 13.0 0.2 1.3 1 0 0 1 1 1 0 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) Borrelia_P13 PF05628.12 ORF13759 - 0.075 13.0 0.0 0.092 12.7 0.0 1.1 1 0 0 1 1 1 0 Borrelia membrane protein P13 PPP4R2 PF09184.11 ORF137337 - 0.017 14.7 19.4 0.022 14.4 19.4 1.0 1 0 0 1 1 1 0 PPP4R2 CDC27 PF09507.10 ORF137337 - 0.029 13.8 19.0 0.034 13.5 19.0 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Nop14 PF04147.12 ORF137337 - 0.071 11.3 18.8 0.082 11.1 18.8 1.1 1 0 0 1 1 1 0 Nop14-like family Astro_capsid_p PF12226.8 ORF137337 - 3.7 6.6 15.2 4.3 6.4 15.2 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Paf1 PF03985.13 ORF137337 - 6 5.7 16.8 8.7 5.2 16.8 1.3 1 0 0 1 1 1 0 Paf1 SecD-TM1 PF13721.6 ORF135488 - 0.04 14.4 0.1 0.078 13.4 0.1 1.5 1 0 0 1 1 1 0 SecD export protein N-terminal TM region PH PF00169.29 ORF134923 - 2.6e-17 63.2 1.5 4.1e-17 62.6 1.5 1.2 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF134923 - 3.7e-08 33.7 2.2 6.3e-08 33.0 2.2 1.4 1 0 0 1 1 1 1 Pleckstrin homology domain PH_2 PF08458.10 ORF134923 - 0.0027 18.0 0.1 0.0059 16.9 0.1 1.5 1 0 0 1 1 1 1 Plant pleckstrin homology-like region PH_15 PF17339.2 ORF134923 - 0.016 15.1 0.2 0.021 14.7 0.2 1.4 1 0 0 1 1 1 0 PH domain DERM PF14704.6 ORF134923 - 0.02 15.4 0.9 0.028 14.9 0.9 1.3 1 0 0 1 1 1 0 Dermatopontin YafO_toxin PF13957.6 ORF134923 - 0.026 14.5 1.0 0.54 10.4 0.1 2.6 2 1 1 3 3 3 0 Toxin YafO, type II toxin-antitoxin system PH_9 PF15410.6 ORF134923 - 0.066 13.6 2.3 0.55 10.6 2.1 2.2 1 1 0 1 1 1 0 Pleckstrin homology domain Thioredoxin_4 PF13462.6 ORF133352 - 0.00054 20.2 0.0 0.00069 19.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF133352 - 0.088 12.6 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Hexokinase_1 PF00349.21 ORF132870 - 0.039 13.8 0.0 0.049 13.5 0.0 1.2 1 0 0 1 1 1 0 Hexokinase Z1 PF10593.9 ORF131513 - 0.016 14.7 4.0 0.02 14.4 4.0 1.0 1 0 0 1 1 1 0 Z1 domain DUF1067 PF06362.11 ORF129605 - 0.076 13.8 0.9 0.27 12.0 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1067) zf-His_Me_endon PF05551.11 ORF129605 - 0.088 13.0 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Zinc-binding loop region of homing endonuclease Exostosin PF03016.15 ORF129436 - 3e-15 56.2 0.0 3.5e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Exostosin family WD40 PF00400.32 ORF129270 - 8.2e-05 23.3 0.5 0.0024 18.7 0.8 2.5 2 0 0 2 2 2 1 WD domain, G-beta repeat AFP PF02420.15 ORF129110 - 0.43 11.1 3.2 1.1 9.8 3.2 1.7 1 0 0 1 1 1 0 Insect antifreeze protein repeat Wx5_PLAF3D7 PF09688.10 ORF127904 - 0.015 15.3 0.3 0.023 14.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (Wx5_PLAF3D7) TMIE PF16038.5 ORF127904 - 0.041 13.7 1.9 0.041 13.7 1.9 2.2 2 0 0 2 2 2 0 TMIE protein Acetyltransf_10 PF13673.7 ORF127108 - 1.3e-14 54.3 0.0 1.4e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF127108 - 3.2e-13 49.9 0.0 4e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF127108 - 5.8e-13 49.1 0.0 7.8e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF127108 - 2.8e-05 24.0 0.0 4.5e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF127108 - 0.0096 16.1 0.0 0.016 15.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF127108 - 0.035 14.2 0.2 0.65 10.1 0.2 2.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_18 PF18014.1 ORF127108 - 0.053 13.4 0.0 0.075 12.9 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PanZ PF12568.8 ORF127108 - 0.15 11.8 0.0 0.36 10.5 0.0 1.7 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain, PanZ cNMP_binding PF00027.29 ORF124409 - 1.5e-08 34.6 0.0 0.00023 21.1 0.0 2.1 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain MetallophosN PF16371.5 ORF124409 - 0.059 13.6 0.3 0.13 12.6 0.1 1.7 1 1 0 1 1 1 0 N terminal of Calcineurin-like phosphoesterase Aldo_ket_red PF00248.21 ORF123850 - 1.4e-16 60.6 0.1 2.2e-15 56.7 0.1 1.9 1 1 0 1 1 1 1 Aldo/keto reductase family VCH_CASS14 PF18315.1 ORF123850 - 0.076 13.1 0.2 0.93 9.6 0.2 2.2 1 1 0 1 1 1 0 Integron cassette protein VCH_CASS1 chain PPP4R2 PF09184.11 ORF123595 - 5.5 6.5 28.7 7.8 6.0 28.7 1.2 1 0 0 1 1 1 0 PPP4R2 zf-C3HC4_3 PF13920.6 ORF12328 - 3.4e-08 33.2 11.4 4.8e-08 32.7 11.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF12328 - 9.3e-07 29.1 15.1 1.5e-06 28.5 15.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF12328 - 2.2e-06 27.4 15.5 4.1e-06 26.6 15.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF12328 - 2.6e-06 27.3 13.4 4.4e-06 26.5 13.4 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF12328 - 1.5e-05 24.8 10.0 3.4e-05 23.6 10.0 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF12328 - 2.5e-05 24.0 14.9 4.1e-05 23.3 14.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF12328 - 0.00025 21.0 12.6 0.014 15.4 8.3 2.4 2 0 0 2 2 2 2 RING-type zinc-finger zf-rbx1 PF12678.7 ORF12328 - 0.00084 19.6 14.2 0.0014 18.9 12.9 2.2 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF12328 - 0.011 15.9 13.4 0.058 13.6 13.8 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF12328 - 0.014 15.4 4.8 0.027 14.5 4.8 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_6 PF14835.6 ORF12328 - 0.71 9.8 10.9 3.8 7.5 10.9 2.0 1 1 0 1 1 1 0 zf-RING of BARD1-type protein SAS-6_N PF16531.5 ORF119479 - 0.69 10.5 7.8 1.2 9.8 7.8 1.3 1 0 0 1 1 1 0 Centriolar protein SAS N-terminal FAM60A PF15396.6 ORF119479 - 4 7.4 10.8 5.3 7.0 10.8 1.1 1 0 0 1 1 1 0 Protein Family FAM60A ATP-synt_10 PF05176.14 ORF118117 - 0.14 11.4 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 ATP10 protein Aldedh PF00171.22 ORF117411 - 0.093 11.2 0.0 0.1 11.1 0.0 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family RRM_1 PF00076.22 ORF117224 - 0.085 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Sugar_tr PF00083.24 ORF116757 - 4.7e-08 32.3 1.9 6.7e-08 31.8 1.9 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter PalH PF08733.10 ORF116757 - 0.00068 18.7 2.9 0.0018 17.4 2.9 1.8 1 1 0 1 1 1 1 PalH/RIM21 DUF5092 PF17010.5 ORF116757 - 0.069 13.1 0.1 0.092 12.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5092) TPR_14 PF13428.6 ORF115013 - 0.89 10.5 4.2 4.7 8.3 0.4 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Kinesin PF00225.23 ORF111232 - 3.1e-16 59.2 0.0 3.4e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF111232 - 1.6e-11 44.4 0.0 2e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Microtubule binding ThaI PF15514.6 ORF111232 - 0.069 12.8 0.0 0.12 12.0 0.0 1.4 1 1 0 1 1 1 0 Restriction endonuclease ThaI AAA_33 PF13671.6 ORF111232 - 0.16 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF1699 PF08004.11 ORF111011 - 0.2 11.3 0.1 0.32 10.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1699) Ac76 PF05814.11 ORF110628 - 0.051 13.6 1.2 0.073 13.1 1.2 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) TMEM138 PF14935.6 ORF110628 - 0.22 12.2 8.5 0.55 10.9 8.4 1.8 1 1 0 1 1 1 0 Transmembrane protein 138 Insulin_TMD PF17870.1 ORF110628 - 0.27 11.3 11.8 0.41 10.8 11.8 1.3 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Orf78 PF06024.12 ORF110628 - 0.3 11.4 5.9 0.42 10.9 5.9 1.2 1 0 0 1 1 1 0 Orf78 (ac78) EVI2A PF05399.11 ORF110628 - 0.77 9.3 3.6 0.96 9.0 3.6 1.1 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Tmemb_9 PF05434.11 ORF110628 - 0.8 9.6 5.0 0.95 9.3 5.0 1.1 1 0 0 1 1 1 0 TMEM9 Myticin-prepro PF10690.9 ORF110628 - 1.2 9.4 3.0 1.7 8.9 3.0 1.2 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel DUF929 PF06053.11 ORF110628 - 2.3 7.4 7.2 2.9 7.1 7.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF929) DUF515 PF04415.12 ORF110628 - 5.9 5.2 5.7 7.2 4.9 5.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Synaptobrevin PF00957.21 ORF110628 - 9.1 6.2 7.6 17 5.3 7.6 1.5 1 0 0 1 1 1 0 Synaptobrevin DHR-2 PF06920.13 ORF109351 - 0.015 14.0 0.8 0.018 13.7 0.8 1.1 1 0 0 1 1 1 0 Dock homology region 2 kleA_kleC PF17383.2 ORF109351 - 0.16 12.4 4.1 0.11 12.8 1.1 2.2 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A UPF0184 PF03670.13 ORF109351 - 4.8 7.6 6.5 88 3.6 6.5 2.2 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) DUF3800 PF12686.7 ORF109344 - 0.03 14.9 0.2 0.046 14.4 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3800) VirE_N PF08800.10 ORF109253 - 0.11 12.6 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 VirE N-terminal domain DNA_pol_delta_4 PF04081.13 ORF10801 - 0.24 11.7 0.2 0.77 10.1 0.2 1.8 1 1 0 1 1 1 0 DNA polymerase delta, subunit 4 zf-C3HC4_3 PF13920.6 ORF10716 - 3.4e-08 33.2 11.4 4.8e-08 32.7 11.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF10716 - 9.3e-07 29.1 15.1 1.5e-06 28.5 15.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF10716 - 2.2e-06 27.4 15.5 4.1e-06 26.6 15.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF10716 - 2.6e-06 27.3 13.4 4.4e-06 26.5 13.4 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF10716 - 1.5e-05 24.8 10.0 3.4e-05 23.6 10.0 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF10716 - 2.5e-05 24.0 14.9 4.1e-05 23.3 14.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF10716 - 0.00025 21.0 12.6 0.014 15.4 8.3 2.4 2 0 0 2 2 2 2 RING-type zinc-finger zf-rbx1 PF12678.7 ORF10716 - 0.00084 19.6 14.2 0.0014 18.9 12.9 2.2 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF10716 - 0.011 15.9 13.4 0.058 13.6 13.8 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF10716 - 0.014 15.4 4.8 0.027 14.5 4.8 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_6 PF14835.6 ORF10716 - 0.71 9.8 10.9 3.8 7.5 10.9 2.0 1 1 0 1 1 1 0 zf-RING of BARD1-type protein MMR_HSR1_Xtn PF16897.5 ORF106190 - 0.0081 16.2 0.4 0.014 15.4 0.2 1.6 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain IFT57 PF10498.9 ORF106190 - 0.017 14.1 8.5 0.019 13.9 8.5 1.2 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Phage_GP20 PF06810.11 ORF106190 - 0.066 13.0 0.4 0.066 13.0 0.4 2.1 1 1 0 2 2 2 0 Phage minor structural protein GP20 DUF2564 PF10819.8 ORF106190 - 0.07 13.5 2.1 2.8 8.4 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2564) Gluconate_2-dh3 PF13618.6 ORF106190 - 0.19 12.0 1.5 0.38 11.0 1.5 1.8 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 Tn7_Tnp_TnsA_C PF08721.11 ORF106190 - 0.31 11.7 2.9 1.5 9.5 0.2 2.3 2 1 0 2 2 2 0 TnsA endonuclease C terminal DUF501 PF04417.12 ORF106190 - 4.1 7.2 5.8 1.3 8.8 0.6 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF501) PGBA_C PF15437.6 ORF106190 - 6.1 7.3 11.7 1.6 9.1 3.8 2.4 2 1 0 2 2 2 0 Plasminogen-binding protein pgbA C-terminal FISNA PF14484.6 ORF105002 - 1.1 9.5 6.8 4.1 7.7 1.4 3.4 2 1 0 2 2 2 0 Fish-specific NACHT associated domain zf-LITAF-like PF10601.9 ORF103913 - 3.4e-05 24.0 14.5 4.7e-05 23.6 14.5 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DZR PF12773.7 ORF103913 - 6.5 6.9 13.2 37 4.4 13.2 2.0 1 1 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 ORF103913 - 7.6 6.6 15.6 8.1 6.5 4.2 2.1 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rhodanese_C PF12368.8 ORF103913 - 9.7 6.6 16.1 66 4.0 16.3 2.0 1 1 1 2 2 2 0 Rhodanase C-terminal YukD PF08817.10 ORF103742 - 0.074 13.8 0.0 0.12 13.1 0.0 1.3 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD FKBP_C PF00254.28 ORF102709 - 4.7e-33 113.4 0.0 6.1e-33 113.0 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase RAMP PF04901.13 ORF10244 - 0.84 9.7 3.1 0.46 10.5 0.2 1.8 2 0 0 2 2 2 0 Receptor activity modifying family zf-RanBP PF00641.18 ORF100568 - 4.8 6.6 16.6 0.62 9.4 5.1 2.3 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others UPF0242 PF06785.11 ORF100355 - 0.021 14.9 29.5 0.027 14.6 29.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF641 PF04859.12 ORF100355 - 0.062 13.6 26.8 0.35 11.2 15.3 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF4407 PF14362.6 ORF100355 - 0.065 12.6 19.6 0.074 12.4 19.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) kleA_kleC PF17383.2 ORF100355 - 0.1 13.0 1.3 0.1 13.0 1.3 2.4 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A Filament PF00038.21 ORF100355 - 0.15 11.6 30.2 0.27 10.8 27.8 2.0 1 1 0 1 1 1 0 Intermediate filament protein End3 PF12761.7 ORF100355 - 0.15 12.2 19.0 0.23 11.6 19.0 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 GrpE PF01025.19 ORF100355 - 0.17 11.5 31.4 0.37 10.4 16.4 2.6 1 1 2 3 3 3 0 GrpE Atg14 PF10186.9 ORF100355 - 0.21 10.6 25.4 0.12 11.4 21.3 1.9 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 ORF100355 - 0.46 10.7 21.4 0.52 10.5 20.4 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family YabA PF06156.13 ORF100355 - 0.5 11.0 25.7 1.3 9.7 4.8 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Pox_A_type_inc PF04508.12 ORF100355 - 0.56 10.2 10.1 6 6.9 0.2 4.2 5 0 0 5 5 3 0 Viral A-type inclusion protein repeat THOC7 PF05615.13 ORF100355 - 0.61 10.4 31.8 1.2 9.4 13.7 2.5 1 1 1 2 2 2 0 Tho complex subunit 7 TolA_bind_tri PF16331.5 ORF100355 - 0.86 9.7 31.3 8.3 6.6 18.2 2.8 1 1 1 2 2 2 0 TolA binding protein trimerisation Prefoldin_2 PF01920.20 ORF100355 - 0.97 9.4 33.1 1.7e+02 2.2 33.2 3.0 1 1 0 1 1 1 0 Prefoldin subunit DUF2730 PF10805.8 ORF100355 - 1 9.5 14.0 1.6 8.9 3.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) HisKA_3 PF07730.13 ORF100355 - 1.2 9.7 8.8 0.32 11.5 0.7 3.0 1 1 1 2 2 2 0 Histidine kinase FlxA PF14282.6 ORF100355 - 1.2 9.2 40.4 0.43 10.6 36.8 1.9 1 1 1 2 2 2 0 FlxA-like protein CENP-F_N PF10481.9 ORF100355 - 1.3 8.6 29.1 2 8.0 29.1 1.2 1 0 0 1 1 1 0 Cenp-F N-terminal domain Golgin_A5 PF09787.9 ORF100355 - 1.4 8.3 27.8 1.6 8.1 27.8 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 TadF PF16964.5 ORF100355 - 1.5 8.6 7.7 2.1 8.1 7.7 1.3 1 0 0 1 1 1 0 Putative tight adherence pilin protein F BLOC1_2 PF10046.9 ORF100355 - 1.7 9.0 23.5 0.1 12.9 6.7 2.6 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ExsD PF16806.5 ORF100355 - 1.9 8.4 18.2 24 4.8 16.1 2.0 1 1 1 2 2 2 0 Antiactivator protein ExsD USP8_interact PF08941.10 ORF100355 - 1.9 8.3 21.3 3.7 7.3 7.1 2.2 1 1 1 2 2 2 0 USP8 interacting Acetyltransf_11 PF13720.6 ORF100355 - 2 8.9 7.9 8.6 6.9 5.9 2.6 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF3450 PF11932.8 ORF100355 - 2.2 7.5 30.8 0.67 9.2 21.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Mod_r PF07200.13 ORF100355 - 2.3 8.3 28.6 18 5.4 27.6 2.1 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Exonuc_VII_L PF02601.15 ORF100355 - 2.5 7.6 15.8 3 7.3 15.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Seryl_tRNA_N PF02403.22 ORF100355 - 2.5 8.4 27.5 3.6 7.9 7.0 2.6 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Ax_dynein_light PF10211.9 ORF100355 - 2.6 7.9 33.7 0.16 11.9 22.3 2.1 1 1 1 2 2 2 0 Axonemal dynein light chain TMPIT PF07851.13 ORF100355 - 2.7 7.2 22.2 0.96 8.6 19.4 1.6 1 1 0 1 1 1 0 TMPIT-like protein CHIP_TPR_N PF18391.1 ORF100355 - 2.9 8.7 25.8 0.59 10.9 14.3 2.3 1 1 1 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain Cnn_1N PF07989.11 ORF100355 - 3 8.1 27.4 0.52 10.5 6.3 2.9 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Allexi_40kDa PF05549.11 ORF100355 - 3.7 7.0 12.9 6.3 6.2 12.8 1.5 1 1 0 1 1 1 0 Allexivirus 40kDa protein AAA_11 PF13086.6 ORF100355 - 3.8 7.2 15.3 4.9 6.9 15.3 1.3 1 0 0 1 1 1 0 AAA domain PCRF PF03462.18 ORF100355 - 4.3 7.2 21.7 3.1 7.6 5.5 2.1 1 1 1 2 2 2 0 PCRF domain NDT80_PhoG PF05224.12 ORF100355 - 4.5 7.5 10.8 6 7.0 10.8 1.1 1 0 0 1 1 1 0 NDT80 / PhoG like DNA-binding family DUF4200 PF13863.6 ORF100355 - 4.5 7.7 35.4 0.41 11.0 9.5 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF4200) WDCP PF15390.6 ORF100355 - 5.2 5.3 13.2 5.2 5.3 13.2 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family SKA1 PF07160.12 ORF100355 - 5.7 6.7 26.4 2.8 7.7 15.7 2.0 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 DivIC PF04977.15 ORF100355 - 5.7 6.8 33.7 4.9 7.0 10.0 4.4 2 1 2 4 4 4 0 Septum formation initiator CAF-1_p150 PF11600.8 ORF100355 - 6 6.5 31.0 7.9 6.2 31.0 1.1 1 0 0 1 1 1 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal Spc24 PF08286.11 ORF100355 - 6 7.2 27.7 9.7 6.5 9.8 2.6 1 1 2 3 3 3 0 Spc24 subunit of Ndc80 DUF1515 PF07439.11 ORF100355 - 6.2 6.9 10.8 16 5.6 10.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) Spc7 PF08317.11 ORF100355 - 6.2 5.6 32.9 12 4.7 32.2 1.7 1 1 1 2 2 2 0 Spc7 kinetochore protein zf-C4H2 PF10146.9 ORF100355 - 7.2 6.9 25.9 2.6 8.3 16.7 2.0 1 1 1 2 2 2 0 Zinc finger-containing protein DUF812 PF05667.11 ORF100355 - 7.5 5.3 34.8 45 2.7 34.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Phage_GPO PF05929.11 ORF100355 - 7.5 6.1 22.7 19 4.8 7.7 1.9 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase Peptidase_U4 PF03419.13 NODE_45356_length_433_cov_2.133166_g37585_i0reverse_frame_1 - 1.1 8.5 6.6 1.5 8.0 6.6 1.2 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Transposase_22 PF02994.14 NODE_45349_length_433_cov_2.773869_g37578_i0reverse_frame_1 - 0.052 13.7 2.3 0.096 12.9 2.3 1.5 1 0 0 1 1 1 0 L1 transposable element RBD-like domain DUF4619 PF15398.6 NODE_45349_length_433_cov_2.773869_g37578_i0reverse_frame_1 - 0.14 11.7 9.3 0.14 11.6 9.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4619) Ole-e-6 PF09253.10 NODE_45349_length_433_cov_2.773869_g37578_i0reverse_frame_1 - 0.64 10.0 13.8 4.3 7.4 13.8 2.3 1 1 0 1 1 1 0 Pollen allergen ole e 6 GREB1 PF15782.5 NODE_45346_length_433_cov_2.932161_g37575_i0forward_frame_1 - 0.07 10.2 0.1 0.073 10.2 0.1 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer DUF4187 PF13821.6 NODE_45345_length_433_cov_3.050251_g37574_i0forward_frame_1 - 0.025 14.4 2.7 0.04 13.7 2.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) SURF6 PF04935.12 NODE_45331_length_433_cov_65.698492_g37560_i0forward_frame_1 - 1.2e-07 31.7 10.2 1.2e-07 31.7 10.2 2.1 2 0 0 2 2 2 1 Surfeit locus protein 6 Ank_4 PF13637.6 NODE_45322_length_433_cov_86.695980_g37551_i0reverse_frame_1 - 1.5e-25 89.2 3.1 6.1e-11 42.6 0.2 2.5 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_45322_length_433_cov_86.695980_g37551_i0reverse_frame_1 - 3.5e-24 85.2 0.2 7.8e-12 45.6 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_45322_length_433_cov_86.695980_g37551_i0reverse_frame_1 - 1.1e-18 66.7 1.8 0.00073 19.9 0.0 4.1 3 1 1 4 4 4 4 Ankyrin repeat Ank_5 PF13857.6 NODE_45322_length_433_cov_86.695980_g37551_i0reverse_frame_1 - 1.5e-15 57.1 2.5 1.1e-06 28.8 0.1 3.3 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_45322_length_433_cov_86.695980_g37551_i0reverse_frame_1 - 2.3e-15 55.1 0.1 6.4e-05 23.1 0.0 4.1 4 0 0 4 4 4 4 Ankyrin repeat DUF3223 PF11523.8 NODE_45322_length_433_cov_86.695980_g37551_i0reverse_frame_1 - 0.19 12.6 0.2 24 5.9 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3223) CHIPS PF11434.8 NODE_45321_length_433_cov_91.615578_g36850_i1reverse_frame_1 - 0.096 12.5 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS PTPLA PF04387.14 NODE_45321_length_433_cov_91.615578_g36850_i1forward_frame_1 - 0.05 13.3 1.0 0.07 12.9 1.0 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA HSNSD PF12062.8 NODE_45316_length_433_cov_107.708543_g37546_i0reverse_frame_1 - 0.013 14.3 0.7 0.015 14.0 0.7 1.1 1 0 0 1 1 1 0 heparan sulfate-N-deacetylase Adipogenin PF15202.6 NODE_45307_length_433_cov_171.555276_g37538_i0reverse_frame_1 - 0.026 14.5 1.2 0.026 14.5 1.2 1.6 1 1 1 2 2 2 0 Adipogenin Ebp2 PF05890.12 NODE_45300_length_433_cov_311.248744_g37531_i0forward_frame_1 - 3.4e-11 43.2 24.3 4.6e-11 42.8 24.3 1.1 1 0 0 1 1 1 1 Eukaryotic rRNA processing protein EBP2 TcdB_N PF12918.7 NODE_45300_length_433_cov_311.248744_g37531_i0forward_frame_1 - 0.065 13.5 0.3 0.17 12.2 0.3 1.6 1 0 0 1 1 1 0 TcdB toxin N-terminal helical domain HflK_N PF12221.8 NODE_45300_length_433_cov_311.248744_g37531_i0forward_frame_1 - 0.33 11.0 11.6 0.45 10.6 0.9 2.8 2 1 0 2 2 2 0 Bacterial membrane protein N terminal Disulph_isomer PF06491.11 NODE_45294_length_433_cov_5840.464824_g37525_i0reverse_frame_1 - 0.11 12.6 1.0 0.14 12.2 1.0 1.2 1 0 0 1 1 1 0 Disulphide isomerase Cnd1 PF12717.7 NODE_45293_length_434_cov_1.501253_g37524_i0forward_frame_1 - 0.001 19.1 0.6 0.0015 18.6 0.6 1.3 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 UNC45-central PF11701.8 NODE_45293_length_434_cov_1.501253_g37524_i0forward_frame_1 - 0.023 14.7 0.1 0.027 14.4 0.1 1.1 1 0 0 1 1 1 0 Myosin-binding striated muscle assembly central Metalloenzyme PF01676.18 NODE_45293_length_434_cov_1.501253_g37524_i0forward_frame_1 - 0.13 11.6 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Metalloenzyme superfamily UbiA PF01040.18 NODE_45287_length_434_cov_2.852130_g37518_i0forward_frame_1 - 0.078 12.3 0.4 0.11 11.8 0.4 1.2 1 0 0 1 1 1 0 UbiA prenyltransferase family Lact-deh-memb PF09330.11 NODE_45283_length_434_cov_3.340852_g37514_i0forward_frame_1 - 1.1e-13 51.2 0.0 1.5e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding Glyco_tran_WecB PF03808.13 NODE_45283_length_434_cov_3.340852_g37514_i0forward_frame_1 - 0.19 11.6 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family PRIMA1 PF16101.5 NODE_45280_length_434_cov_25.536341_g37511_i0reverse_frame_1 - 0.0046 17.0 1.5 0.0057 16.7 1.5 1.2 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_45280_length_434_cov_25.536341_g37511_i0reverse_frame_1 - 0.042 13.3 5.2 0.051 13.1 5.2 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_45280_length_434_cov_25.536341_g37511_i0reverse_frame_1 - 0.22 11.5 1.5 0.27 11.3 1.5 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator NPR3 PF03666.13 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 0.25 10.1 22.9 0.26 10.0 22.9 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 0.41 9.4 15.9 0.37 9.5 15.9 1.1 1 0 0 1 1 1 0 Presenilin Apt1 PF10351.9 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 0.76 8.6 15.4 0.69 8.7 15.4 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain AF-4 PF05110.13 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 1.2 7.1 29.3 1.1 7.2 29.3 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF5427 PF10310.9 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 1.5 7.7 22.6 1.6 7.6 22.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5427) CENP-N PF05238.13 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 1.7 7.9 13.9 1.9 7.7 13.9 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Membralin PF09746.9 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 1.7 7.6 7.2 1.6 7.7 7.2 1.1 1 0 0 1 1 1 0 Tumour-associated protein MDM10 PF12519.8 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 1.7 7.4 16.4 1.7 7.4 16.4 1.1 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 DUF4614 PF15391.6 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 2.4 8.1 17.3 3.3 7.7 17.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) Zip PF02535.22 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 3.1 6.9 12.6 3.2 6.9 12.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Band_3_cyto PF07565.13 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 5.2 6.8 8.2 5 6.8 8.2 1.3 1 0 0 1 1 1 0 Band 3 cytoplasmic domain Peptidase_S64 PF08192.11 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 6.7 5.1 15.4 7.5 4.9 15.4 1.1 1 0 0 1 1 1 0 Peptidase family S64 Sec10 PF07393.11 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 6.7 5.0 13.9 6.5 5.0 13.9 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec10 CDC45 PF02724.14 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_1 - 7.1 4.8 28.7 8.4 4.6 28.7 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF4351 PF14261.6 NODE_45278_length_434_cov_30.508772_g37509_i0reverse_frame_1 - 0.15 12.2 0.1 0.26 11.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4351) DUF1002 PF06207.11 NODE_45275_length_434_cov_36.804511_g5984_i2forward_frame_1 - 0.012 15.1 5.7 0.022 14.3 5.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) Pkinase PF00069.25 NODE_45261_length_434_cov_86.749373_g37493_i0reverse_frame_1 - 1.6e-05 24.4 0.0 2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Choline_kinase PF01633.20 NODE_45261_length_434_cov_86.749373_g37493_i0reverse_frame_1 - 0.18 11.4 0.0 0.24 11.0 0.0 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase RCC1_2 PF13540.6 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_1 - 1.6e-05 24.6 6.7 0.26 11.1 0.1 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_1 - 0.0081 16.3 0.4 14 5.7 0.0 3.0 2 1 1 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Lipocalin_7 PF14651.6 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_1 - 0.081 12.9 2.3 9.3 6.2 0.1 2.4 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family Methyltransf_29 PF03141.16 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_1 - 0.11 11.1 0.2 2 6.9 0.0 2.5 1 1 1 3 3 3 0 Putative S-adenosyl-L-methionine-dependent methyltransferase MyTH4 PF00784.17 NODE_45252_length_434_cov_135.709273_g37484_i0forward_frame_1 - 0.015 15.8 5.6 1.5 9.3 0.1 2.7 2 1 1 3 3 3 0 MyTH4 domain HTH_50 PF18024.1 NODE_45252_length_434_cov_135.709273_g37484_i0forward_frame_1 - 0.049 13.3 0.1 10 5.8 0.0 2.9 4 0 0 4 4 4 0 Helix-turn-helix domain TB2_DP1_HVA22 PF03134.19 NODE_45248_length_434_cov_155.090226_g37480_i0forward_frame_1 - 0.29 11.1 5.4 0.93 9.5 0.1 2.3 1 1 0 2 2 2 0 TB2/DP1, HVA22 family PSRT PF07636.11 NODE_45246_length_434_cov_184.213033_g37478_i0reverse_frame_1 - 0.23 11.2 3.8 0.82 9.4 3.8 2.0 1 0 0 1 1 1 0 PSRT PARP PF00644.20 NODE_45228_length_435_cov_1.812500_g37461_i0reverse_frame_1 - 1.8e-10 40.7 1.9 2.9e-09 36.8 1.9 2.0 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DNA_pol_alpha_N PF12254.8 NODE_45228_length_435_cov_1.812500_g37461_i0reverse_frame_1 - 0.017 15.2 0.6 0.028 14.5 0.6 1.3 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal FMN_red PF03358.15 NODE_45219_length_435_cov_2.717500_g37452_i0reverse_frame_1 - 0.066 13.0 0.0 0.083 12.6 0.0 1.2 1 0 0 1 1 1 0 NADPH-dependent FMN reductase Frizzled PF01534.17 NODE_45203_length_435_cov_63.422500_g37436_i0reverse_frame_1 - 0.08 12.0 0.2 0.1 11.6 0.2 1.1 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region YfcL PF08891.11 NODE_45200_length_435_cov_65.387500_g37433_i0forward_frame_1 - 0.067 13.5 0.9 0.24 11.8 0.0 2.1 2 1 1 3 3 3 0 YfcL protein AAA PF00004.29 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 1.2e-14 54.9 0.1 1.5e-14 54.5 0.1 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 3.4e-05 23.6 0.0 6.6e-05 22.7 0.0 1.4 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.00011 22.2 0.1 0.00014 21.9 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.00013 22.3 0.0 0.00019 21.7 0.0 1.3 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.00015 22.1 0.1 0.00045 20.6 0.1 1.7 1 1 0 1 1 1 1 RNA helicase AAA_5 PF07728.14 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.00034 20.6 0.0 0.00046 20.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Rad17 PF03215.15 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.00045 20.2 2.1 0.0011 19.0 2.1 1.6 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_11 PF13086.6 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.0006 19.7 0.1 0.00084 19.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.00099 19.5 0.0 0.0016 18.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.0013 18.5 0.0 0.0016 18.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.14 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.0079 16.3 0.1 0.0098 16.0 0.1 1.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.0096 16.1 0.0 0.013 15.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.014 15.4 0.7 2.4 8.2 0.6 2.1 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.016 15.5 0.8 0.13 12.6 0.8 2.0 1 1 0 1 1 1 0 AAA domain AAA_6 PF12774.7 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.021 13.8 0.0 0.025 13.6 0.0 1.2 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region AAA_24 PF13479.6 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.025 14.3 0.1 0.042 13.6 0.1 1.4 1 0 0 1 1 1 0 AAA domain DEAD PF00270.29 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.027 14.2 0.1 1.5 8.5 0.0 2.1 1 1 1 2 2 2 0 DEAD/DEAH box helicase NTPase_1 PF03266.15 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.036 14.0 0.3 0.14 12.1 0.3 1.9 1 1 0 1 1 1 0 NTPase AAA_18 PF13238.6 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.058 13.9 0.1 0.099 13.2 0.1 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.062 12.7 0.0 0.086 12.2 0.0 1.3 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.065 12.7 0.4 0.15 11.5 0.4 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.09 12.5 0.0 0.19 11.4 0.0 1.7 1 1 0 1 1 1 0 Sigma-54 interaction domain TniB PF05621.11 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_1 - 0.1 12.0 0.1 0.97 8.8 0.1 1.9 1 1 0 1 1 1 0 Bacterial TniB protein OHCU_decarbox PF09349.10 NODE_45183_length_435_cov_117.132500_g37416_i0reverse_frame_1 - 0.00058 20.4 0.8 0.00068 20.1 0.8 1.1 1 0 0 1 1 1 1 OHCU decarboxylase DUF4363 PF14276.6 NODE_45183_length_435_cov_117.132500_g37416_i0reverse_frame_1 - 0.076 13.1 0.2 0.16 12.1 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4363) PRY PF13765.6 NODE_45181_length_435_cov_126.860000_g37414_i0forward_frame_1 - 0.012 15.2 0.5 0.012 15.2 0.5 2.0 2 0 0 2 2 2 0 SPRY-associated domain Aminotran_4 PF01063.19 NODE_45178_length_435_cov_158.395000_g37411_i0forward_frame_1 - 1e-14 55.0 0.0 1.3e-14 54.6 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV Acetyltransf_CG PF14542.6 NODE_45178_length_435_cov_158.395000_g37411_i0forward_frame_1 - 0.13 12.4 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Sugar_tr PF00083.24 NODE_45172_length_435_cov_210.925000_g37405_i0forward_frame_1 - 1.4e-13 50.5 23.5 1.5e-13 50.4 23.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_45172_length_435_cov_210.925000_g37405_i0forward_frame_1 - 0.00032 19.7 14.4 0.00032 19.7 14.4 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily Herpes_LMP1 PF05297.11 NODE_45172_length_435_cov_210.925000_g37405_i0forward_frame_1 - 4.2 6.5 14.0 4.6 6.3 14.0 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF167 PF02594.16 NODE_45166_length_435_cov_802.220000_g37399_i0reverse_frame_1 - 1.8e-09 37.6 0.2 3.4e-09 36.7 0.2 1.4 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Hexapep_2 PF14602.6 NODE_45166_length_435_cov_802.220000_g37399_i0reverse_frame_1 - 0.032 14.0 0.0 0.047 13.5 0.0 1.2 1 0 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase Arc_trans_TRASH PF08394.10 NODE_45166_length_435_cov_802.220000_g37399_i0forward_frame_1 - 0.097 13.0 4.9 0.65 10.4 0.6 2.5 2 0 0 2 2 2 0 Archaeal TRASH domain Spo7_2_N PF15407.6 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_1 - 0.067 12.8 0.9 5.7 6.7 0.1 2.3 2 0 0 2 2 2 0 Sporulation protein family 7 DUF1700 PF08006.11 NODE_45152_length_436_cov_1.633416_g37386_i0forward_frame_2 - 0.056 13.0 0.7 0.065 12.8 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Isochorismatase PF00857.20 NODE_45148_length_436_cov_2.301746_g37382_i0reverse_frame_2 - 2.5e-16 60.4 0.0 3e-16 60.1 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family RTP1_C2 PF10304.9 NODE_45147_length_436_cov_2.356608_g37381_i0reverse_frame_3 - 0.17 11.6 0.0 0.17 11.6 0.0 1.7 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks176.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks176.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks176.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks176.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Bac_surface_Ag PF01103.23 NODE_45139_length_436_cov_3.431421_g37373_i0forward_frame_2 - 1.4e-13 51.0 3.2 1.5e-13 51.0 1.4 1.7 2 0 0 2 2 2 1 Surface antigen POTRA PF07244.15 NODE_45139_length_436_cov_3.431421_g37373_i0forward_frame_2 - 2.6e-05 24.7 0.0 6.2e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Surface antigen variable number repeat PorP_SprF PF11751.8 NODE_45139_length_436_cov_3.431421_g37373_i0forward_frame_2 - 0.004 16.7 0.1 0.0059 16.2 0.1 1.2 1 0 0 1 1 1 1 Type IX secretion system membrane protein PorP/SprF DUF1456 PF07308.13 NODE_45138_length_436_cov_3.436409_g37372_i0reverse_frame_3 - 0.057 13.8 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1456) Cation_ATPase_C PF00689.21 NODE_45128_length_436_cov_58.062344_g37362_i0reverse_frame_2 - 0.035 13.8 0.0 0.047 13.4 0.0 1.2 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus Pkinase_C PF00433.24 NODE_45124_length_436_cov_67.835411_g37358_i0forward_frame_2 - 2.6e-06 28.0 1.9 5.3e-06 27.0 1.9 1.5 1 0 0 1 1 1 1 Protein kinase C terminal domain Pkinase PF00069.25 NODE_45124_length_436_cov_67.835411_g37358_i0forward_frame_2 - 0.046 13.1 0.0 0.076 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein kinase domain DUF2378 PF09536.10 NODE_45123_length_436_cov_68.708229_g37357_i0forward_frame_2 - 0.016 15.1 0.1 0.02 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2378) PV-1 PF06637.11 NODE_45114_length_436_cov_80.344140_g37348_i0reverse_frame_3 - 0.12 11.1 11.9 0.14 11.0 11.9 1.2 1 0 0 1 1 1 0 PV-1 protein (PLVAP) Poty_PP PF08440.10 NODE_45114_length_436_cov_80.344140_g37348_i0reverse_frame_3 - 0.56 9.2 5.2 0.64 9.1 5.2 1.1 1 0 0 1 1 1 0 Potyviridae polyprotein Synaphin PF05835.12 NODE_45114_length_436_cov_80.344140_g37348_i0reverse_frame_3 - 2 8.7 21.2 4.2 7.6 21.3 1.6 1 1 0 1 1 1 0 Synaphin protein DUF4407 PF14362.6 NODE_45114_length_436_cov_80.344140_g37348_i0reverse_frame_3 - 4.5 6.5 7.6 5.8 6.2 7.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) 60KD_IMP PF02096.20 NODE_45114_length_436_cov_80.344140_g37348_i0forward_frame_3 - 1.7 8.5 3.9 4.9 7.0 3.9 1.8 1 1 0 1 1 1 0 60Kd inner membrane protein Ribosomal_L27A PF00828.19 NODE_45113_length_436_cov_82.087282_g37347_i0forward_frame_3 - 9.9e-22 78.0 0.0 1.6e-21 77.3 0.0 1.3 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Sugar-bind PF04198.13 NODE_45113_length_436_cov_82.087282_g37347_i0forward_frame_3 - 0.047 12.8 0.0 0.061 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative sugar-binding domain DUF2516 PF10724.9 NODE_45111_length_436_cov_85.159601_g37345_i0reverse_frame_3 - 0.0061 16.8 0.6 0.54 10.6 0.4 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF2516) Phageshock_PspG PF09583.10 NODE_45111_length_436_cov_85.159601_g37345_i0reverse_frame_3 - 0.27 11.5 3.4 0.55 10.6 3.4 1.5 1 0 0 1 1 1 0 Phage shock protein G (Phageshock_PspG) zf-RING_12 PF17976.1 NODE_45111_length_436_cov_85.159601_g37345_i0reverse_frame_2 - 2.1 8.7 5.5 0.79 10.0 0.5 2.3 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain RseC_MucC PF04246.12 NODE_45111_length_436_cov_85.159601_g37345_i0forward_frame_2 - 0.33 10.9 2.4 0.55 10.2 2.4 1.3 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Ank_5 PF13857.6 NODE_45102_length_436_cov_138.473815_g37336_i0forward_frame_2 - 2e-15 56.6 1.7 2.2e-10 40.6 0.3 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_45102_length_436_cov_138.473815_g37336_i0forward_frame_2 - 6e-15 54.9 0.2 4.3e-07 30.1 0.3 4.0 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 NODE_45102_length_436_cov_138.473815_g37336_i0forward_frame_2 - 1.6e-13 50.8 0.0 0.0024 18.4 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_45102_length_436_cov_138.473815_g37336_i0forward_frame_2 - 1.2e-12 48.2 0.0 8.4e-12 45.5 0.0 1.9 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_45102_length_436_cov_138.473815_g37336_i0forward_frame_2 - 2.2e-10 39.8 0.1 0.00014 22.0 0.0 4.8 4 2 0 4 4 4 2 Ankyrin repeat NINJA_B PF16136.5 NODE_45099_length_436_cov_151.605985_g37333_i0reverse_frame_3 - 0.85 10.0 6.3 1.2 9.6 6.3 1.3 1 0 0 1 1 1 0 Putative nuclear localisation signal RPW8 PF05659.11 NODE_45099_length_436_cov_151.605985_g37333_i0reverse_frame_2 - 0.092 12.4 0.1 0.18 11.5 0.1 1.5 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Guanylate_cyc PF00211.20 NODE_45098_length_436_cov_187.004988_g37332_i0reverse_frame_2 - 6.2e-08 32.5 0.0 8.4e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Atg8 PF02991.16 NODE_45086_length_436_cov_1076.112219_g37322_i0reverse_frame_3 - 8.5e-07 29.1 0.5 1.4e-06 28.5 0.5 1.5 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like US6 PF17616.2 NODE_45086_length_436_cov_1076.112219_g37322_i0reverse_frame_2 - 0.063 13.2 4.2 0.085 12.8 4.2 1.1 1 0 0 1 1 1 0 Viral unique short region 6 Plasmodium_HRP PF05403.11 NODE_45083_length_436_cov_9863.099751_g37321_i0forward_frame_3 - 0.0048 16.7 2.9 0.0059 16.4 2.9 1.1 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) Glucan_synthase PF02364.15 NODE_45083_length_436_cov_9863.099751_g37321_i0forward_frame_3 - 0.047 11.8 1.6 0.047 11.9 1.6 1.0 1 0 0 1 1 1 0 1,3-beta-glucan synthase component hnRNP_Q_AcD PF18360.1 NODE_45083_length_436_cov_9863.099751_g37321_i0forward_frame_3 - 0.43 10.6 6.5 4.1 7.4 0.7 2.4 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain HTH_39 PF14090.6 NODE_45083_length_436_cov_9863.099751_g37321_i0forward_frame_3 - 0.48 10.2 2.2 4.6 7.1 0.2 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain DUF4826 PF16108.5 NODE_45083_length_436_cov_9863.099751_g37321_i0forward_frame_3 - 8.2 6.7 12.3 3.2 8.0 3.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4826) RPA_C PF08784.11 NODE_45083_length_436_cov_9863.099751_g37321_i0forward_frame_3 - 8.4 7.1 11.9 18 6.1 4.4 2.2 1 1 1 2 2 2 0 Replication protein A C terminal Collagen PF01391.18 NODE_45083_length_436_cov_9863.099751_g37321_i0forward_frame_2 - 4.2e-05 23.2 22.0 0.0046 16.7 9.8 2.2 1 1 1 2 2 2 2 Collagen triple helix repeat (20 copies) Osteopontin PF00865.18 NODE_45083_length_436_cov_9863.099751_g37321_i0forward_frame_2 - 0.2 11.1 10.7 2.2 7.7 0.2 2.1 2 0 0 2 2 2 0 Osteopontin Nop14 PF04147.12 NODE_45083_length_436_cov_9863.099751_g37321_i0forward_frame_2 - 0.44 8.7 4.8 0.41 8.8 4.8 1.0 1 0 0 1 1 1 0 Nop14-like family AMP-binding PF00501.28 NODE_45077_length_437_cov_2.027363_g37315_i0reverse_frame_3 - 1e-27 96.9 0.1 1.1e-27 96.7 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme MR_MLE_C PF13378.6 NODE_45077_length_437_cov_2.027363_g37315_i0reverse_frame_2 - 0.17 11.4 0.2 0.22 11.1 0.2 1.2 1 0 0 1 1 1 0 Enolase C-terminal domain-like AphA_like PF14557.6 NODE_45077_length_437_cov_2.027363_g37315_i0reverse_frame_2 - 0.2 11.3 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 Putative AphA-like transcriptional regulator YkuI_C PF10388.9 NODE_45070_length_437_cov_2.853234_g37308_i0reverse_frame_3 - 0.093 12.5 1.7 0.21 11.4 1.0 1.8 1 1 1 2 2 2 0 EAL-domain associated signalling protein domain AI-2E_transport PF01594.16 NODE_45070_length_437_cov_2.853234_g37308_i0reverse_frame_3 - 0.29 10.3 0.5 0.35 10.0 0.5 1.1 1 0 0 1 1 1 0 AI-2E family transporter SPT16 PF08644.11 NODE_45068_length_437_cov_2.890547_g37306_i0reverse_frame_3 - 0.049 13.8 0.9 0.06 13.5 0.9 1.2 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) DUF2797 PF10977.8 NODE_45065_length_437_cov_3.062189_g37303_i0reverse_frame_3 - 1 9.2 5.3 1.4 8.7 5.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) NUDIX PF00293.28 NODE_45065_length_437_cov_3.062189_g37303_i0forward_frame_2 - 3.9e-08 33.4 0.2 5.2e-08 33.0 0.2 1.2 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 NODE_45065_length_437_cov_3.062189_g37303_i0forward_frame_2 - 0.019 15.0 0.3 0.025 14.6 0.3 1.2 1 0 0 1 1 1 0 NUDIX domain CSS-motif PF12792.7 NODE_45064_length_437_cov_3.196517_g37302_i0reverse_frame_3 - 8.4e-28 97.3 0.0 9.4e-28 97.1 0.0 1.0 1 0 0 1 1 1 1 CSS motif domain associated with EAL SpoVR PF04293.13 NODE_45063_length_437_cov_3.231343_g37301_i0reverse_frame_3 - 6.5e-58 196.4 1.0 7e-58 196.3 1.0 1.0 1 0 0 1 1 1 1 SpoVR like protein Peptidase_M1 PF01433.20 NODE_45063_length_437_cov_3.231343_g37301_i0reverse_frame_3 - 0.0068 16.0 0.1 0.011 15.3 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain MCRS_N PF13325.6 NODE_45063_length_437_cov_3.231343_g37301_i0reverse_frame_3 - 0.11 12.5 0.4 0.13 12.2 0.4 1.1 1 0 0 1 1 1 0 N-terminal region of micro-spherule protein WD40 PF00400.32 NODE_45063_length_437_cov_3.231343_g37301_i0forward_frame_2 - 7.2 7.7 8.0 1.8e+02 3.2 4.4 3.7 2 1 0 2 2 2 0 WD domain, G-beta repeat SopA PF13981.6 NODE_45060_length_437_cov_3.480100_g37298_i0forward_frame_3 - 0.11 12.9 0.2 0.21 12.0 0.2 1.4 1 0 0 1 1 1 0 SopA-like central domain Rbsn PF11464.8 NODE_45052_length_437_cov_73.500000_g37290_i0reverse_frame_2 - 0.044 13.5 0.3 0.1 12.3 0.3 1.6 1 0 0 1 1 1 0 Rabenosyn Rab binding domain PAP_assoc PF03828.19 NODE_45047_length_437_cov_78.119403_g37285_i0forward_frame_2 - 0.034 14.3 0.8 0.054 13.7 0.8 1.3 1 0 0 1 1 1 0 Cid1 family poly A polymerase Cir_Bir_Yir PF06022.11 NODE_45046_length_437_cov_78.179104_g34460_i1reverse_frame_2 - 0.0088 15.6 5.8 0.015 14.8 5.8 1.5 1 1 0 1 1 1 1 Plasmodium variant antigen protein Cir/Yir/Bir DUF2116 PF09889.9 NODE_45046_length_437_cov_78.179104_g34460_i1reverse_frame_2 - 0.23 11.4 0.2 0.23 11.4 0.2 2.5 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF3139 PF11337.8 NODE_45046_length_437_cov_78.179104_g34460_i1reverse_frame_2 - 3.7 8.3 8.6 9.9 6.9 8.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) GIY-YIG PF01541.24 NODE_45044_length_437_cov_89.067164_g37283_i0forward_frame_2 - 0.0038 17.5 0.1 0.0086 16.3 0.0 1.6 2 0 0 2 2 2 1 GIY-YIG catalytic domain DUF4632 PF15451.6 NODE_45040_length_437_cov_122.522388_g37279_i0reverse_frame_3 - 2.9 8.0 7.6 5.6 7.1 7.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4632) UCH PF00443.29 NODE_45030_length_437_cov_168.529851_g37270_i0reverse_frame_2 - 2.1e-19 70.0 0.5 2.6e-19 69.8 0.5 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_45030_length_437_cov_168.529851_g37270_i0reverse_frame_2 - 2.8e-05 23.9 0.0 3.2e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase NICE-1 PF15845.5 NODE_45029_length_437_cov_186.557214_g37269_i0forward_frame_2 - 0.046 14.5 12.4 0.061 14.1 5.2 2.2 2 0 0 2 2 2 0 Cysteine-rich C-terminal 1 family RNase_T PF00929.24 NODE_45028_length_437_cov_192.512438_g37268_i0forward_frame_3 - 7.1e-05 23.4 0.0 9.4e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Exonuclease ScdA_N PF04405.14 NODE_45022_length_437_cov_271.681592_g37262_i0forward_frame_3 - 0.15 11.7 1.5 0.39 10.4 1.5 1.6 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) Metalloenzyme PF01676.18 NODE_45020_length_437_cov_296.283582_g37260_i0reverse_frame_2 - 0.25 10.7 0.7 0.3 10.4 0.7 1.2 1 0 0 1 1 1 0 Metalloenzyme superfamily Sporozoite_P67 PF05642.11 NODE_45009_length_438_cov_2.042184_g37249_i0forward_frame_2 - 0.46 8.5 3.3 0.53 8.3 3.3 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen WD40 PF00400.32 NODE_45008_length_438_cov_2.121588_g37248_i0forward_frame_3 - 3.9e-07 30.7 5.4 2.9e-05 24.7 0.3 3.4 4 0 0 4 4 4 2 WD domain, G-beta repeat 5_nucleotid_C PF02872.18 NODE_45000_length_438_cov_2.833747_g37240_i0reverse_frame_2 - 0.083 13.1 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 5'-nucleotidase, C-terminal domain Peripla_BP_3 PF13377.6 NODE_44999_length_438_cov_2.957816_g37239_i0forward_frame_3 - 0.14 12.5 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein-like domain PapC_N PF13954.6 NODE_44998_length_438_cov_2.970223_g37238_i0reverse_frame_3 - 3.3e-10 40.1 0.0 4.8e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 PapC N-terminal domain IL17_R_N PF15037.6 NODE_44998_length_438_cov_2.970223_g37238_i0reverse_frame_3 - 0.055 12.4 0.0 0.074 12.0 0.0 1.1 1 0 0 1 1 1 0 Interleukin-17 receptor extracellular region Spike_rec_bind PF09408.10 NODE_44998_length_438_cov_2.970223_g37238_i0forward_frame_3 - 0.0054 16.5 0.1 0.0094 15.7 0.1 1.3 1 0 0 1 1 1 1 Spike receptor binding domain VSP PF03302.13 NODE_44996_length_438_cov_4.081886_g37236_i0reverse_frame_3 - 0.063 12.1 0.0 0.084 11.7 0.0 1.2 1 0 0 1 1 1 0 Giardia variant-specific surface protein CxC6 PF18721.1 NODE_44996_length_438_cov_4.081886_g37236_i0reverse_frame_3 - 7.7 6.9 9.2 0.72 10.2 3.0 2.4 2 1 0 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases DUF1096 PF06493.11 NODE_44996_length_438_cov_4.081886_g37236_i0forward_frame_2 - 0.044 14.2 0.8 0.32 11.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1096) Colicin_Pyocin PF01320.18 NODE_44984_length_438_cov_74.933002_g37224_i0reverse_frame_3 - 0.017 15.2 0.3 0.017 15.2 0.3 1.7 2 0 0 2 2 2 0 Colicin immunity protein / pyocin immunity protein CD20 PF04103.15 NODE_44984_length_438_cov_74.933002_g37224_i0reverse_frame_2 - 3.1 7.9 6.0 0.51 10.4 2.5 1.5 2 0 0 2 2 2 0 CD20-like family DUF818 PF05677.12 NODE_44984_length_438_cov_74.933002_g37224_i0forward_frame_2 - 2 7.3 5.3 1.1 8.2 3.5 1.3 1 1 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) DUF2890 PF11081.8 NODE_44982_length_438_cov_81.017370_g37222_i0reverse_frame_3 - 0.21 11.7 3.4 0.21 11.7 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) Ribosomal_L23 PF00276.20 NODE_44982_length_438_cov_81.017370_g37222_i0reverse_frame_2 - 1e-16 61.0 2.7 3.4e-16 59.4 2.7 1.7 1 1 0 1 1 1 1 Ribosomal protein L23 Borrelia_rep PF03183.13 NODE_44980_length_438_cov_85.012407_g37220_i0forward_frame_2 - 0.037 14.0 6.0 0.081 12.9 0.3 3.4 2 0 0 2 2 2 0 Borrelia repeat protein DUF4801 PF16059.5 NODE_44978_length_438_cov_90.002481_g37218_i0forward_frame_3 - 0.053 13.5 3.4 0.092 12.7 1.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4801) Ribosomal_L31e PF01198.19 NODE_44975_length_438_cov_92.779156_g37215_i0reverse_frame_3 - 9.2e-38 128.4 3.1 1.3e-37 127.9 3.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L31e Stomagen PF16851.5 NODE_44975_length_438_cov_92.779156_g37215_i0reverse_frame_2 - 0.032 14.2 2.5 0.057 13.4 0.3 2.2 2 0 0 2 2 2 0 Stomagen WBP-1 PF11669.8 NODE_44974_length_438_cov_97.796526_g37214_i0forward_frame_2 - 0.034 14.8 0.1 0.047 14.3 0.1 1.3 1 0 0 1 1 1 0 WW domain-binding protein 1 NIF PF03031.18 NODE_44967_length_438_cov_133.007444_g37207_i0reverse_frame_2 - 3e-23 82.3 0.0 4e-23 81.9 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase VitD-bind_III PF09164.10 NODE_44966_length_438_cov_139.196030_g37206_i0reverse_frame_3 - 3.7 7.6 6.2 0.28 11.2 1.1 1.8 2 0 0 2 2 2 0 Vitamin D binding protein, domain III RCDG1 PF15725.5 NODE_44966_length_438_cov_139.196030_g37206_i0forward_frame_2 - 5.3 7.5 7.6 9.8 6.7 7.6 1.5 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein DUF2457 PF10446.9 NODE_44966_length_438_cov_139.196030_g37206_i0forward_frame_2 - 5.7 6.0 7.8 6.4 5.8 7.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) NUDIX PF00293.28 NODE_44961_length_438_cov_186.617866_g37201_i0forward_frame_2 - 2e-05 24.6 0.1 3e-05 24.1 0.1 1.3 1 1 0 1 1 1 1 NUDIX domain eIF3_subunit PF08597.10 NODE_44951_length_438_cov_354.925558_g34064_i2forward_frame_3 - 0.078 12.9 4.0 0.1 12.5 4.0 1.1 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Bac_DnaA PF00308.18 NODE_44951_length_438_cov_354.925558_g34064_i2forward_frame_3 - 0.17 11.7 0.2 0.2 11.5 0.2 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein DUF5340 PF17275.2 NODE_44951_length_438_cov_354.925558_g34064_i2forward_frame_3 - 0.32 11.2 4.2 0.33 11.1 3.2 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5340) DUF5136 PF17199.4 NODE_44938_length_438_cov_5199.518610_g30442_i3reverse_frame_3 - 0.0072 16.0 1.2 0.033 13.9 1.2 2.1 1 0 0 1 1 1 1 Protein of unknown function (DUF5136) DUF3399 PF11879.8 ORF99151 - 1.6 9.1 3.2 4.1 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) NiFe_hyd_SSU_C PF14720.6 ORF99151 - 2.2 8.7 8.5 5 7.6 2.2 2.4 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal DUF3082 PF11282.8 ORF99039 - 0.047 13.9 0.2 0.077 13.2 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3082) DUF4558 PF15104.6 ORF98627 - 0.036 14.1 1.1 0.054 13.6 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4558) DUF4600 PF15372.6 ORF98627 - 0.32 11.4 2.1 0.48 10.9 2.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4600) GST_C_2 PF13410.6 ORF98259 - 5.1e-10 39.2 0.3 5.1e-10 39.2 0.3 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF98259 - 7.6e-09 35.7 0.2 1.5e-08 34.8 0.0 1.5 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF98259 - 1.4e-06 28.4 0.0 2e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Cuticle_2 PF08184.11 ORF98259 - 0.018 15.0 2.1 0.034 14.1 2.1 1.4 1 0 0 1 1 1 0 Cuticle protein 7 isoform family SERTA PF06031.13 ORF93574 - 0.36 10.5 1.1 0.65 9.7 1.1 1.3 1 0 0 1 1 1 0 SERTA motif MCCD1 PF15707.5 ORF9203 - 0.017 15.5 0.1 0.92 10.0 0.0 2.6 3 0 0 3 3 3 0 Mitochondrial coiled-coil domain protein 1 2OG-FeII_Oxy_3 PF13640.6 ORF89941 - 2.5e-09 37.9 0.0 1.1e-08 35.8 0.0 1.8 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF89941 - 0.11 13.0 0.1 0.21 12.1 0.1 1.7 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Asp-Al_Ex PF06826.12 ORF89465 - 9.1e-40 136.2 7.2 1e-39 136.0 7.2 1.0 1 0 0 1 1 1 1 Predicted Permease Membrane Region zinc_ribbon_15 PF17032.5 ORF88303 - 0.012 16.3 3.9 0.023 15.4 3.9 1.7 1 1 0 1 1 1 0 zinc-ribbon family DZR PF12773.7 ORF88303 - 0.1 12.6 10.4 0.054 13.5 8.1 1.8 2 0 0 2 2 2 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 ORF88303 - 0.48 10.2 7.0 5 7.0 0.1 2.8 3 0 0 3 3 3 0 zinc-ribbon domain HypA PF01155.19 ORF88303 - 0.92 9.6 6.1 1.4 9.0 6.1 1.5 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Josephin PF02099.17 ORF88159 - 1.4e-12 48.1 0.0 3.7e-11 43.4 0.0 2.1 1 1 0 1 1 1 1 Josephin Peptidase_C12 PF01088.21 ORF88159 - 0.0015 18.3 0.0 0.0015 18.3 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 DUF3139 PF11337.8 ORF87552 - 0.44 11.2 6.3 0.12 13.0 3.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) HCV_NS5a_1a PF08300.13 ORF87332 - 0.17 12.0 2.5 0.45 10.7 2.5 1.8 1 1 0 1 1 1 0 Hepatitis C virus non-structural 5a zinc finger domain ABC_tran PF00005.27 ORF85512 - 1.2e-10 42.1 0.1 2.2e-10 41.2 0.1 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF85512 - 2.4e-05 23.9 0.3 2.9e-05 23.6 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF5544 PF17698.1 ORF85084 - 0.66 10.1 4.0 1.2 9.2 4.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5544) Pkinase PF00069.25 ORF84987 - 9.9e-05 21.8 0.0 0.00016 21.1 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain DUF3399 PF11879.8 ORF84977 - 1.6 9.1 3.2 4.1 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) NiFe_hyd_SSU_C PF14720.6 ORF84977 - 2.2 8.7 8.5 5 7.6 2.2 2.4 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal Gpi1 PF05024.15 ORF84503 - 0.065 13.3 3.8 0.082 13.0 3.7 1.4 1 1 0 1 1 1 0 N-acetylglucosaminyl transferase component (Gpi1) DUF4527 PF15030.6 ORF8336 - 0.13 11.6 0.1 0.17 11.3 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4527) XRN1_DBM PF18245.1 ORF80131 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 5-3 exonuclease XRN1 DCP1-binding motif zf-LITAF-like PF10601.9 ORF78076 - 2e-05 24.8 14.1 2.7e-05 24.4 14.1 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Tetraspanin PF00335.20 ORF78076 - 0.0025 17.6 0.5 0.0031 17.3 0.5 1.1 1 0 0 1 1 1 1 Tetraspanin family DZR PF12773.7 ORF78076 - 4 7.5 13.6 24 5.1 13.6 2.0 1 1 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 ORF78076 - 5.2 7.1 15.2 6.3 6.9 4.1 2.1 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NodS PF05401.11 ORF75959 - 0.028 14.0 0.0 0.034 13.8 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) DUF3399 PF11879.8 ORF73238 - 1.6 9.1 3.2 4.1 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) NiFe_hyd_SSU_C PF14720.6 ORF73238 - 2.2 8.7 8.5 5 7.6 2.2 2.4 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal DUF2938 PF11158.8 ORF72962 - 0.11 12.0 0.5 0.46 9.9 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2938) YiaAB PF05360.14 ORF72923 - 1.7e-40 137.0 13.1 5.8e-21 74.5 1.5 2.1 2 0 0 2 2 2 2 yiaA/B two helix domain DUF4956 PF16316.5 ORF72923 - 0.1 12.3 4.3 0.044 13.4 1.6 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4956) MARVEL PF01284.23 ORF72923 - 0.1 12.6 8.1 0.018 15.1 2.7 1.9 1 1 1 2 2 2 0 Membrane-associating domain DUF1218 PF06749.12 ORF72923 - 0.17 12.4 9.8 0.19 12.3 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1218) Claudin_2 PF13903.6 ORF72923 - 1.8 8.3 7.3 0.91 9.2 2.8 2.1 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction DUF3040 PF11239.8 ORF72923 - 1.9 8.8 7.1 2.5 8.4 1.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) FtsX PF02687.21 ORF72923 - 2.2 8.8 9.4 1.3 9.5 6.5 2.1 1 1 0 1 1 1 0 FtsX-like permease family DUF202 PF02656.15 ORF72923 - 5.8 7.4 10.0 4.1 7.9 0.2 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF202) DUF555 PF04475.12 ORF72498 - 0.046 14.0 0.0 0.11 12.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF555) zf-Mss51 PF13824.6 ORF72498 - 5.5 7.2 14.0 38 4.5 13.3 2.4 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 HAD_2 PF13419.6 ORF70539 - 0.02 15.0 0.2 0.22 11.6 0.0 2.1 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase ABC_tran PF00005.27 ORF70356 - 1.3e-10 41.9 0.1 2.2e-10 41.2 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF70356 - 2.4e-05 23.9 0.3 3e-05 23.6 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain 7tm_7 PF08395.12 ORF7031 - 0.07 12.3 1.8 0.11 11.7 1.8 1.3 1 0 0 1 1 1 0 7tm Chemosensory receptor SPO22 PF08631.10 ORF69995 - 0.0059 16.1 2.4 0.0078 15.7 2.4 1.2 1 0 0 1 1 1 1 Meiosis protein SPO22/ZIP4 like 2OG-FeII_Oxy_3 PF13640.6 ORF69266 - 2.5e-09 37.9 0.0 1.1e-08 35.8 0.0 1.8 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF69266 - 0.11 13.0 0.1 0.21 12.1 0.1 1.7 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily KH_dom-like PF14714.6 ORF66270 - 0.031 14.6 0.2 0.052 13.9 0.2 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PRR20 PF15708.5 ORF66270 - 0.2 11.5 0.2 0.26 11.1 0.2 1.1 1 0 0 1 1 1 0 Proline-rich protein family 20 IMUP PF15761.5 ORF66270 - 2.5 8.9 8.3 4 8.2 8.3 1.3 1 0 0 1 1 1 0 Immortalisation up-regulated protein PH_17 PF18012.1 ORF6618 - 0.039 13.7 0.5 0.2 11.4 0.1 2.1 2 0 0 2 2 2 0 PH domain LmjF365940-deam PF14421.6 ORF63869 - 4.8e-26 91.6 0.7 1.2e-17 64.2 0.1 2.0 1 1 1 2 2 2 2 A distinct subfamily of CDD/CDA-like deaminases dCMP_cyt_deam_1 PF00383.23 ORF63869 - 0.00019 21.2 0.1 0.00026 20.8 0.1 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Guanylate_kin PF00625.21 ORF63048 - 7.2e-21 74.7 0.8 8.3e-21 74.5 0.8 1.0 1 0 0 1 1 1 1 Guanylate kinase Peptidase_M75 PF09375.10 ORF63048 - 0.0011 18.5 0.0 0.0013 18.3 0.0 1.1 1 0 0 1 1 1 1 Imelysin EssA PF10661.9 ORF63048 - 0.13 12.1 4.9 0.21 11.5 4.9 1.4 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA zf-C3HC4_2 PF13923.6 ORF62824 - 2.3e-05 24.2 9.1 0.00082 19.2 6.9 2.2 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF62824 - 3.8e-05 23.4 6.5 9.3e-05 22.2 6.5 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF62824 - 0.00014 22.1 5.0 0.00014 22.1 5.0 2.0 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF62824 - 0.0034 17.1 2.3 0.0038 16.9 0.2 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF62824 - 0.0035 17.6 5.4 0.0051 17.1 5.4 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain DUF2781 PF10914.8 ORF62824 - 0.069 13.6 0.1 0.1 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) zf-RING_5 PF14634.6 ORF62824 - 0.35 10.8 10.8 0.81 9.7 10.8 1.7 1 1 0 1 1 1 0 zinc-RING finger domain DUF3013 PF11217.8 ORF62802 - 0.0057 16.5 0.9 1.8 8.4 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF3013) TGS PF02824.21 ORF62802 - 0.14 12.3 0.0 0.97 9.5 0.0 2.0 2 0 0 2 2 2 0 TGS domain DUF3972 PF13118.6 ORF62056 - 0.0059 17.1 6.2 0.032 14.7 6.2 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF3972) Noelin-1 PF12308.8 ORF62056 - 0.012 15.6 1.6 0.017 15.1 0.7 1.7 1 1 0 1 1 1 0 Neurogenesis glycoprotein LapD_MoxY_N PF16448.5 ORF62056 - 0.013 15.4 0.6 0.018 14.9 0.6 1.3 1 0 0 1 1 1 0 LapD/MoxY periplasmic domain LPP PF04728.13 ORF62056 - 0.029 14.7 1.3 5.7 7.4 0.2 2.5 2 0 0 2 2 2 0 Lipoprotein leucine-zipper DUF4618 PF15397.6 ORF62056 - 0.031 13.7 9.5 0.052 13.0 1.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) TSC22 PF01166.18 ORF62056 - 0.032 14.5 4.8 0.77 10.1 0.6 2.9 3 1 0 3 3 3 0 TSC-22/dip/bun family Fzo_mitofusin PF04799.13 ORF62056 - 0.042 13.4 5.3 0.06 12.9 5.3 1.3 1 0 0 1 1 1 0 fzo-like conserved region DUF848 PF05852.11 ORF62056 - 0.042 14.0 4.3 0.14 12.3 2.1 2.0 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) Lipoprotein_20 PF13942.6 ORF62056 - 0.057 13.3 3.9 0.13 12.1 3.9 1.6 1 1 0 1 1 1 0 YfhG lipoprotein DUF5595 PF18077.1 ORF62056 - 0.066 13.3 6.8 0.82 9.8 2.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5595) DUF3847 PF12958.7 ORF62056 - 0.079 13.1 1.7 0.079 13.1 1.7 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3847) Syntaxin-6_N PF09177.11 ORF62056 - 0.093 13.3 2.9 0.18 12.4 2.9 1.8 1 1 0 1 1 1 0 Syntaxin 6, N-terminal LCD1 PF09798.9 ORF62056 - 0.12 10.9 11.7 0.61 8.5 3.3 2.0 1 1 1 2 2 2 0 DNA damage checkpoint protein DivIC PF04977.15 ORF62056 - 0.21 11.4 7.6 0.62 9.9 2.7 2.5 1 1 1 2 2 2 0 Septum formation initiator Get5_C PF18514.1 ORF62056 - 0.29 10.9 1.8 1.1 9.1 0.0 2.7 3 0 0 3 3 3 0 Get5 C-terminal domain bZIP_2 PF07716.15 ORF62056 - 0.3 11.2 5.3 0.46 10.6 2.0 2.5 2 1 1 3 3 3 0 Basic region leucine zipper DUF2205 PF10224.9 ORF62056 - 0.35 10.9 6.4 0.68 10.0 0.8 2.4 2 0 0 2 2 2 0 Short coiled-coil protein bZIP_1 PF00170.21 ORF62056 - 0.4 10.8 9.2 1.3 9.2 3.4 2.4 2 0 0 2 2 2 0 bZIP transcription factor Uso1_p115_C PF04871.13 ORF62056 - 0.44 10.9 5.8 1.1 9.6 1.6 2.1 2 0 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Seryl_tRNA_N PF02403.22 ORF62056 - 0.45 10.8 7.1 3.1 8.1 6.8 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Spc24 PF08286.11 ORF62056 - 0.55 10.5 5.8 8.3 6.7 0.2 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 FAM76 PF16046.5 ORF62056 - 1.2 8.4 7.9 2.4 7.4 7.8 1.4 1 1 0 1 1 1 0 FAM76 protein SlyX PF04102.12 ORF62056 - 1.4 9.6 5.5 24 5.6 0.1 2.9 2 1 1 3 3 3 0 SlyX DUF5320 PF17253.2 ORF62056 - 2.9 9.0 4.0 3.7 8.7 1.4 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5320) YabA PF06156.13 ORF62056 - 3.4 8.4 7.7 38 5.0 7.7 2.5 1 1 0 1 1 1 0 Initiation control protein YabA ZapB PF06005.12 ORF62056 - 6.7 7.2 13.9 1 9.8 4.0 3.1 1 1 2 3 3 3 0 Cell division protein ZapB MatE PF01554.18 ORF61070 - 0.00099 18.8 1.2 0.00099 18.8 1.2 1.7 1 1 0 1 1 1 1 MatE FA_desaturase PF00487.24 ORF61070 - 0.056 13.3 0.2 0.067 13.0 0.2 1.1 1 0 0 1 1 1 0 Fatty acid desaturase VMA21 PF09446.10 ORF59127 - 7.8e-08 32.3 2.6 1.2e-07 31.7 2.6 1.2 1 0 0 1 1 1 1 VMA21-like domain DUF1129 PF06570.11 ORF59127 - 0.0055 16.2 1.4 0.013 15.0 1.4 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) IRK_N PF08466.10 ORF59127 - 0.011 15.8 2.7 0.021 14.9 2.7 1.5 1 0 0 1 1 1 0 Inward rectifier potassium channel N-terminal Zip PF02535.22 ORF59127 - 0.029 13.6 0.0 0.036 13.3 0.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter MAP17 PF15807.5 ORF59127 - 0.083 13.1 3.5 0.11 12.7 3.5 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Ldt_C PF17969.1 ORF59070 - 0.37 11.5 2.2 0.72 10.6 0.2 2.3 1 1 2 3 3 3 0 L,D-transpeptidase C-terminal domain Myc_target_1 PF15179.6 ORF59070 - 0.85 9.5 7.2 0.2 11.5 3.4 1.8 1 1 0 2 2 2 0 Myc target protein 1 ABC_tran PF00005.27 ORF56051 - 1.3e-07 32.2 0.0 3.4e-07 30.9 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF56051 - 3.4e-06 27.1 0.0 3.7e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF56051 - 0.0043 16.5 0.0 0.0048 16.4 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF56051 - 0.0076 16.5 0.1 0.033 14.4 0.1 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit 3H PF02829.14 ORF56051 - 0.12 12.7 0.6 0.2 12.0 0.6 1.3 1 0 0 1 1 1 0 3H domain Pertussis_S2S3 PF02918.15 ORF50287 - 0.0049 16.8 0.0 0.0095 15.8 0.0 1.5 1 0 0 1 1 1 1 Pertussis toxin, subunit 2 and 3, C-terminal domain F_actin_bind PF08919.10 ORF50287 - 0.026 14.6 0.1 0.036 14.2 0.1 1.3 1 0 0 1 1 1 0 F-actin binding TFIIF_beta PF02270.15 ORF50183 - 0.022 14.9 0.0 0.097 12.8 0.0 1.9 1 1 0 1 1 1 0 TFIIF, beta subunit HTH domain DUF5625 PF18539.1 ORF49357 - 0.2 12.0 4.3 0.16 12.2 3.0 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5625) HopA1 PF17914.1 ORF48472 - 0.11 12.3 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 HopA1 effector protein family Clat_adaptor_s PF01217.20 ORF46315 - 1.3e-42 145.0 4.8 1.6e-42 144.8 4.8 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain Hep_core_N PF08290.11 ORF46110 - 0.21 11.6 0.4 0.21 11.6 0.4 1.9 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger PknG_rubred PF16919.5 ORF45440 - 0.064 13.4 0.5 0.11 12.7 0.0 1.6 2 0 0 2 2 2 0 Protein kinase G rubredoxin domain DUF3678 PF12435.8 ORF44522 - 2.1 7.8 13.5 9.5 5.7 5.1 3.8 3 1 0 3 3 3 0 Protein of unknown function (DUF3678) DUF2374 PF09574.10 ORF43209 - 0.11 12.3 0.6 0.18 11.6 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (Duf2374) DUF3399 PF11879.8 ORF4200 - 1.6 9.1 3.2 4.1 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) NiFe_hyd_SSU_C PF14720.6 ORF4200 - 2.2 8.7 8.5 5 7.6 2.2 2.4 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal LysR_substrate PF03466.20 ORF4016 - 1.4e-14 54.0 0.1 2.1e-14 53.4 0.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain SBP56 PF05694.11 ORF38387 - 0.53 9.0 3.1 0.73 8.6 3.1 1.2 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) Ras PF00071.22 ORF35231 - 1.8e-40 138.2 0.2 2.3e-40 137.9 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF35231 - 4.7e-31 107.5 0.1 5.8e-31 107.2 0.1 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF35231 - 2.5e-09 36.8 0.2 2.9e-09 36.6 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF35231 - 2.1e-05 24.6 0.0 2.9e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF35231 - 0.00019 20.9 0.0 0.00022 20.7 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region AAA_7 PF12775.7 ORF35231 - 0.0033 17.0 0.0 0.0046 16.5 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_22 PF13401.6 ORF35231 - 0.0033 17.7 0.0 0.0072 16.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF35231 - 0.02 14.8 0.0 0.028 14.3 0.0 1.4 1 1 0 1 1 1 0 RsgA GTPase DAP3 PF10236.9 ORF35231 - 0.021 14.0 0.0 0.029 13.6 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 cobW PF02492.19 ORF35231 - 0.035 13.7 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 ORF35231 - 0.05 13.5 0.0 0.1 12.5 0.0 1.5 2 0 0 2 2 2 0 NACHT domain AAA_29 PF13555.6 ORF35231 - 0.056 13.2 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NB-ARC PF00931.22 ORF35231 - 0.06 12.5 0.0 0.06 12.5 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Septin PF00735.18 ORF35231 - 0.078 12.3 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 Septin AAA_16 PF13191.6 ORF35231 - 0.08 13.3 0.1 0.27 11.6 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 ORF35231 - 0.1 13.1 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 ORF35231 - 0.17 11.1 0.0 1.8 7.8 0.0 2.1 1 1 1 2 2 2 0 Zeta toxin CEBP_ZZ PF16366.5 ORF34320 - 0.027 14.7 1.2 0.053 13.8 1.2 1.5 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Copine PF07002.16 ORF34091 - 7.5e-44 149.8 0.3 8.2e-44 149.6 0.3 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF34091 - 9.7e-08 32.4 0.1 1.3e-07 31.9 0.1 1.2 1 1 0 1 1 1 1 vWA found in TerF C terminus VWA PF00092.28 ORF34091 - 0.006 16.9 0.0 0.01 16.1 0.0 1.3 1 1 0 1 1 1 1 von Willebrand factor type A domain DUF1087 PF06465.13 ORF33598 - 0.033 14.2 0.2 0.079 13.0 0.2 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) ESP PF16590.5 ORF32674 - 0.37 11.1 6.9 0.62 10.4 5.9 1.9 1 1 0 1 1 1 0 Exocrine gland-secreting peptide P63C PF10546.9 ORF3131 - 0.37 11.4 4.0 1.3 9.6 1.6 2.1 1 1 1 2 2 2 0 P63C domain Sda PF08970.10 ORF29845 - 0.039 13.7 0.6 0.11 12.2 0.1 2.0 2 0 0 2 2 2 0 Sporulation inhibitor A DUF1068 PF06364.12 ORF29845 - 0.19 11.6 3.1 0.13 12.1 0.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1068) Hs1pro-1_N PF07231.12 ORF29390 - 0.16 11.7 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Hs1pro-1 N-terminus ABC_tran PF00005.27 ORF28996 - 2.1e-10 41.2 1.5 2.2e-10 41.2 0.0 1.7 3 0 0 3 3 3 1 ABC transporter SMC_N PF02463.19 ORF28996 - 4.2e-05 23.1 0.3 5.3e-05 22.8 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain CsoSCA PF08936.10 ORF28996 - 0.029 13.0 0.0 0.034 12.8 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase ELL PF10390.9 ORF28996 - 0.074 12.5 0.1 0.12 11.9 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase II elongation factor ELL IMPa_helical PF18642.1 ORF2853 - 0.035 14.5 0.1 0.047 14.1 0.1 1.2 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain cwf21 PF08312.12 ORF2853 - 0.057 13.6 0.6 0.73 10.0 0.6 2.2 1 1 0 1 1 1 0 cwf21 domain HTH_Tnp_Tc3_1 PF11427.8 ORF2853 - 0.15 11.9 0.7 0.31 10.9 0.1 1.8 2 0 0 2 2 2 0 Tc3 transposase GpcrRhopsn4 PF10192.9 ORF2583 - 0.014 14.8 0.3 0.014 14.8 0.3 1.5 2 0 0 2 2 2 0 Rhodopsin-like GPCR transmembrane domain Mucin15 PF15672.5 ORF25675 - 0.88 9.0 7.1 1 8.8 7.1 1.0 1 0 0 1 1 1 0 Cell-membrane associated Mucin15 VitD-bind_III PF09164.10 ORF24562 - 8.6 6.4 11.3 18 5.4 4.1 2.4 2 0 0 2 2 2 0 Vitamin D binding protein, domain III Herpes_UL3 PF03369.13 ORF24448 - 0.12 12.9 0.4 0.21 12.1 0.1 1.5 2 0 0 2 2 2 0 Herpesvirus UL3 protein ARD PF03079.14 ORF24428 - 3.2 7.9 8.5 1.5 9.0 6.3 1.6 1 1 0 1 1 1 0 ARD/ARD' family DUF4212 PF13937.6 ORF21257 - 0.29 11.5 5.1 0.16 12.3 1.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) DUF4119 PF13494.6 ORF21257 - 3.5 7.8 4.5 11 6.2 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF4119) ABC_tran PF00005.27 ORF1946 - 1.4e-10 41.8 0.0 2.2e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF1946 - 0.00015 21.3 0.3 0.00017 21.1 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain CsoSCA PF08936.10 ORF1946 - 0.011 14.4 0.0 0.013 14.2 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase ELL PF10390.9 ORF1946 - 0.082 12.4 0.1 0.12 11.9 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase II elongation factor ELL TBSV_P22 PF03558.13 ORF18326 - 0.0089 15.5 0.0 0.012 15.1 0.0 1.2 1 0 0 1 1 1 1 TBSV core protein P21/P22 CHORD PF04968.12 ORF16865 - 0.034 14.9 1.4 0.041 14.6 0.6 1.5 1 1 0 1 1 1 0 CHORD DUF3399 PF11879.8 ORF1623 - 1.6 9.1 3.2 4.1 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) NiFe_hyd_SSU_C PF14720.6 ORF1623 - 2.2 8.7 8.5 5 7.6 2.2 2.4 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal DUF4515 PF14988.6 ORF16134 - 0.00016 21.5 17.4 0.00019 21.3 17.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4515) Exonuc_VII_L PF02601.15 ORF16134 - 0.014 15.0 4.2 0.016 14.8 4.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit TipAS PF07739.13 ORF16134 - 0.028 15.0 6.0 0.028 15.0 5.0 1.5 1 1 0 1 1 1 0 TipAS antibiotic-recognition domain AnfG_VnfG PF03139.15 ORF16134 - 0.039 14.1 1.4 0.039 14.1 1.4 1.9 2 0 0 2 2 2 0 Vanadium/alternative nitrogenase delta subunit SOAR PF16533.5 ORF16134 - 0.071 13.1 5.1 0.043 13.8 3.0 1.6 1 1 1 2 2 2 0 STIM1 Orai1-activating region TMPIT PF07851.13 ORF16134 - 0.2 10.9 4.8 0.24 10.6 4.8 1.2 1 0 0 1 1 1 0 TMPIT-like protein HMG_box_5 PF14887.6 ORF16134 - 0.21 11.6 2.6 0.16 11.9 0.9 1.7 1 1 0 2 2 2 0 HMG (high mobility group) box 5 DUF4407 PF14362.6 ORF16134 - 0.25 10.7 4.4 0.31 10.4 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Lectin_N PF03954.14 ORF16134 - 0.53 10.0 3.9 0.4 10.4 2.0 1.7 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Nrf1_DNA-bind PF10491.9 ORF15300 - 0.0097 15.6 4.7 0.0097 15.6 4.7 1.5 1 1 1 2 2 2 1 NLS-binding and DNA-binding and dimerisation domains of Nrf1 Aldo_ket_red PF00248.21 ORF152260 - 4.4e-15 55.6 0.0 8.6e-15 54.7 0.0 1.5 1 1 0 1 1 1 1 Aldo/keto reductase family BTB PF00651.31 ORF150301 - 0.00011 22.4 0.0 0.00014 22.1 0.0 1.2 1 0 0 1 1 1 1 BTB/POZ domain DUF4248 PF14053.6 ORF150301 - 0.13 12.3 0.2 0.45 10.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4248) GP11 PF08677.10 ORF150301 - 0.22 11.0 0.0 0.27 10.7 0.0 1.2 1 0 0 1 1 1 0 GP11 baseplate wedge protein DUF5383 PF17355.2 ORF149961 - 0.53 10.7 8.5 0.16 12.4 1.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5383) DUF2207 PF09972.9 ORF149961 - 0.59 8.8 3.6 0.67 8.6 3.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1700 PF08006.11 ORF149961 - 9.7 5.7 15.7 12 5.3 15.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) MFS_1 PF07690.16 ORF149858 - 4.8e-08 32.3 6.2 5.4e-08 32.2 6.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MSA-2c PF12238.8 ORF148579 - 0.26 11.3 3.3 0.36 10.8 3.3 1.2 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF3399 PF11879.8 ORF148465 - 1.6 9.1 3.2 4.1 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) NiFe_hyd_SSU_C PF14720.6 ORF148465 - 2.2 8.7 8.5 5 7.6 2.2 2.4 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal DUF3267 PF11667.8 ORF14780 - 0.055 13.7 7.1 2.8 8.3 3.9 2.7 1 1 1 2 2 2 0 Putative zincin peptidase Tube PF17212.3 ORF14780 - 0.22 11.6 0.0 16 5.5 0.0 2.1 1 1 1 2 2 2 0 Tail tubular protein CBP_BcsF PF11120.8 ORF14780 - 2.7 8.2 7.2 0.98 9.6 0.4 2.7 3 0 0 3 3 3 0 Cellulose biosynthesis protein BcsF DUF3399 PF11879.8 ORF146734 - 1.6 9.1 3.2 4.1 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) NiFe_hyd_SSU_C PF14720.6 ORF146734 - 2.2 8.7 8.5 5 7.6 2.2 2.4 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal Imm53 PF15580.6 ORF145351 - 0.06 13.1 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 53 CpeT PF06206.11 ORF144457 - 0.14 12.1 0.3 0.21 11.5 0.3 1.3 1 1 0 1 1 1 0 CpeT/CpcT family (DUF1001) Prok-RING_4 PF14447.6 ORF143718 - 0.77 9.7 10.4 1.3 8.9 10.4 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF143718 - 0.93 9.5 7.8 1.8 8.6 7.8 1.5 1 0 0 1 1 1 0 zinc-RING finger domain Ribosomal_S17e PF00833.18 ORF143324 - 5.4e-61 203.9 3.3 6.3e-61 203.7 3.3 1.0 1 0 0 1 1 1 1 Ribosomal S17 HTH_Tnp_1_2 PF13022.6 ORF143324 - 0.056 13.6 0.2 3.1 8.0 0.0 2.7 1 1 2 3 3 3 0 Helix-turn-helix of insertion element transposase DinB_2 PF12867.7 ORF143324 - 0.16 12.5 0.0 0.21 12.1 0.0 1.1 1 0 0 1 1 1 0 DinB superfamily Eapp_C PF10238.9 ORF141171 - 0.15 12.2 4.7 0.21 11.7 4.7 1.3 1 0 0 1 1 1 0 E2F-associated phosphoprotein MAJIN PF15077.6 ORF141171 - 0.33 10.7 4.3 0.36 10.6 4.3 1.1 1 0 0 1 1 1 0 Membrane-anchored junction protein SWIRM-assoc_2 PF16496.5 ORF141171 - 1.7 7.4 6.7 1.9 7.3 6.7 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal Peripla_BP_3 PF13377.6 ORF14078 - 4.7e-07 30.3 0.1 2.1e-06 28.2 0.0 1.8 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Shisa PF13908.6 ORF140680 - 0.00019 21.8 0.1 0.00024 21.4 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator CD34_antigen PF06365.12 ORF140680 - 0.0031 17.1 0.0 0.0041 16.7 0.0 1.1 1 0 0 1 1 1 1 CD34/Podocalyxin family VSP PF03302.13 ORF140680 - 0.058 12.2 0.5 0.095 11.5 0.5 1.3 1 0 0 1 1 1 0 Giardia variant-specific surface protein DUF4834 PF16118.5 ORF140680 - 0.094 13.7 1.5 0.37 11.8 1.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) COX14 PF14880.6 ORF140680 - 0.17 11.7 0.2 0.25 11.2 0.2 1.2 1 0 0 1 1 1 0 Cytochrome oxidase c assembly DUF4690 PF15756.5 ORF140680 - 0.66 10.6 3.9 0.68 10.6 0.2 2.2 2 1 0 2 2 2 0 Small Novel Rich in Cartilage Orf78 PF06024.12 ORF140680 - 3.4 8.0 6.9 0.61 10.4 0.4 2.1 1 1 0 2 2 2 0 Orf78 (ac78) Histone PF00125.24 ORF139260 - 2.3e-53 180.1 3.2 2.5e-53 179.9 3.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF139260 - 1.4e-05 25.7 1.9 1.8e-05 25.4 1.9 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF139260 - 0.00017 21.9 0.0 0.00027 21.3 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF139260 - 0.00035 20.7 0.1 0.00068 19.7 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF139260 - 0.0022 18.3 0.1 0.0049 17.1 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF139260 - 0.057 13.5 0.0 0.089 12.9 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit DUF2545 PF10810.8 ORF139006 - 0.021 15.0 0.5 0.031 14.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2545) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks177.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks177.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks177.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks177.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:09:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Thioredoxin_8 PF13905.6 ORF136863 - 3.2e-27 94.7 0.0 4.6e-27 94.2 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 ORF136863 - 7.6e-08 32.3 0.1 0.0079 16.2 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.6 ORF136863 - 1.8e-06 28.4 0.0 2.6e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Redoxin PF08534.10 ORF136863 - 0.0013 18.5 0.0 0.0017 18.1 0.0 1.1 1 0 0 1 1 1 1 Redoxin Thioredoxin_7 PF13899.6 ORF136863 - 0.16 12.2 0.1 0.41 10.9 0.1 1.7 1 1 0 1 1 1 0 Thioredoxin-like NodS PF05401.11 ORF136782 - 0.028 14.0 0.0 0.034 13.8 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) SPOUT_MTase PF02590.17 ORF136260 - 2.7e-42 144.4 0.0 3e-42 144.2 0.0 1.0 1 0 0 1 1 1 1 Predicted SPOUT methyltransferase Apc13p PF05839.11 ORF135640 - 0.11 12.7 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Apc13p protein SWI-SNF_Ssr4 PF08549.10 ORF135640 - 0.94 8.0 6.2 0.38 9.4 4.2 1.3 1 1 0 1 1 1 0 Fungal domain of unknown function (DUF1750) Tub_N PF16322.5 ORF135131 - 1.6 9.1 10.4 2 8.8 10.4 1.1 1 0 0 1 1 1 0 Tubby N-terminal TauD PF02668.16 ORF134807 - 2.4e-10 40.6 0.2 3.7e-10 40.1 0.2 1.3 1 1 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family CsiD PF08943.10 ORF134807 - 0.023 13.8 0.0 0.029 13.5 0.0 1.1 1 0 0 1 1 1 0 CsiD DUF3399 PF11879.8 ORF13477 - 1.6 9.1 3.2 4.1 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) NiFe_hyd_SSU_C PF14720.6 ORF13477 - 2.2 8.7 8.5 5 7.6 2.2 2.4 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal Synaptobrevin PF00957.21 ORF133712 - 5.6e-12 45.3 6.9 5.6e-12 45.3 6.9 2.1 2 0 0 2 2 2 1 Synaptobrevin Vma12 PF11712.8 ORF133712 - 0.0056 16.7 7.0 0.0056 16.7 7.0 1.5 2 0 0 2 2 2 1 Endoplasmic reticulum-based factor for assembly of V-ATPase AAA_13 PF13166.6 ORF133712 - 0.012 14.3 15.8 0.012 14.3 15.8 1.0 1 0 0 1 1 1 0 AAA domain DUF848 PF05852.11 ORF133712 - 0.014 15.6 10.1 0.018 15.2 10.1 1.2 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) RAMPs PF03787.15 ORF133712 - 0.13 12.3 2.4 0.15 12.0 2.4 1.1 1 0 0 1 1 1 0 RAMP superfamily DUF3452 PF11934.8 ORF133712 - 0.23 11.0 8.6 0.21 11.1 7.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) Spc7 PF08317.11 ORF133712 - 0.56 9.0 19.6 0.72 8.7 19.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF1664 PF07889.12 ORF133712 - 1.2 9.2 9.8 0.2 11.7 2.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF133712 - 1.5 8.1 15.6 1.3 8.3 5.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Fzo_mitofusin PF04799.13 ORF133712 - 2.4 7.7 12.3 5.5 6.5 2.7 2.1 1 1 1 2 2 2 0 fzo-like conserved region Exonuc_VII_L PF02601.15 ORF133712 - 7.4 6.0 12.0 8.8 5.8 12.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit MyTH4 PF00784.17 ORF128742 - 4e-15 56.2 0.2 6.1e-15 55.6 0.1 1.5 1 1 1 2 2 2 1 MyTH4 domain Ribosomal_S9 PF00380.19 ORF127646 - 6.3e-33 113.9 0.3 7.1e-33 113.7 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 SSP160 PF06933.11 ORF126920 - 0.011 14.0 16.1 0.01 14.1 16.1 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF1751 PF08551.10 ORF126920 - 1 10.0 4.3 0.56 10.8 0.4 2.2 2 1 0 2 2 2 0 Eukaryotic integral membrane protein (DUF1751) Dicty_REP PF05086.12 ORF126920 - 2.2 6.1 7.0 2.6 5.9 7.0 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein FSA_C PF10479.9 ORF126920 - 2.3 6.2 10.6 2.4 6.2 10.6 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus FKBP_C PF00254.28 ORF126658 - 2.1e-11 44.0 0.0 3.3e-11 43.3 0.0 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Glycophorin_A PF01102.18 ORF126492 - 6.6e-06 26.3 3.1 1.5e-05 25.2 3.1 1.7 1 1 0 1 1 1 1 Glycophorin A TMEM154 PF15102.6 ORF126492 - 3.9e-05 23.6 11.3 7.9e-05 22.6 11.3 1.5 1 1 0 1 1 1 1 TMEM154 protein family Adeno_E3 PF06040.11 ORF126492 - 0.0015 18.7 0.8 0.0019 18.3 0.8 1.3 1 0 0 1 1 1 1 Adenovirus E3 protein Orf78 PF06024.12 ORF126492 - 0.0016 18.7 1.1 0.0016 18.7 1.1 1.8 1 1 1 2 2 2 1 Orf78 (ac78) Shisa PF13908.6 ORF126492 - 0.0052 17.1 0.9 0.0052 17.1 0.9 1.8 1 1 1 2 2 2 1 Wnt and FGF inhibitory regulator S1FA PF04689.13 ORF126492 - 0.0056 16.8 0.0 0.0091 16.1 0.0 1.3 1 0 0 1 1 1 1 DNA binding protein S1FA Plasmodium_Vir PF05795.11 ORF126492 - 0.007 15.8 0.5 0.0075 15.7 0.5 1.1 1 0 0 1 1 1 1 Plasmodium vivax Vir protein TMEM132D_C PF15706.5 ORF126492 - 0.008 15.9 0.2 0.019 14.8 0.2 1.6 1 1 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Peptidase_M56 PF05569.11 ORF126492 - 0.0092 15.2 0.3 0.011 15.0 0.3 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 EphA2_TM PF14575.6 ORF126492 - 0.0097 16.8 0.2 0.021 15.7 0.1 1.6 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain DUF2434 PF10361.9 ORF126492 - 0.013 14.5 1.6 0.018 14.1 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2434) Mid2 PF04478.12 ORF126492 - 0.013 15.3 8.7 0.013 15.3 8.7 2.0 1 1 1 2 2 2 0 Mid2 like cell wall stress sensor Amnionless PF14828.6 ORF126492 - 0.017 14.0 0.1 0.017 13.9 0.1 1.1 1 0 0 1 1 1 0 Amnionless Stevor PF17410.2 ORF126492 - 0.019 14.5 4.1 0.026 14.1 4.1 1.2 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame UL45 PF05473.12 ORF126492 - 0.021 14.5 0.8 0.03 14.0 0.5 1.5 1 1 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like TrbL PF04610.14 ORF126492 - 0.022 14.5 5.0 0.027 14.2 5.0 1.1 1 0 0 1 1 1 0 TrbL/VirB6 plasmid conjugal transfer protein DUF5305 PF17231.2 ORF126492 - 0.028 13.8 5.8 0.055 12.9 5.8 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5305) DUF4690 PF15756.5 ORF126492 - 0.036 14.7 3.4 0.062 13.9 3.4 1.5 1 1 0 1 1 1 0 Small Novel Rich in Cartilage Gemini_mov PF01708.16 ORF126492 - 0.042 13.6 0.0 0.058 13.2 0.0 1.3 1 0 0 1 1 1 0 Geminivirus putative movement protein TMEM51 PF15345.6 ORF126492 - 0.043 13.7 0.1 0.059 13.2 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 51 Saf_2TM PF18303.1 ORF126492 - 0.043 13.4 0.4 0.043 13.4 0.4 1.8 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain Podoplanin PF05808.11 ORF126492 - 0.11 12.6 11.5 0.12 12.5 10.9 1.4 1 1 0 1 1 1 0 Podoplanin FAM163 PF15069.6 ORF126492 - 0.13 12.7 0.2 0.13 12.7 0.2 1.8 2 0 0 2 2 2 0 FAM163 family Adeno_E3_CR2 PF02439.15 ORF126492 - 0.13 12.0 3.2 0.23 11.2 3.2 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Insulin_TMD PF17870.1 ORF126492 - 0.14 12.2 4.9 0.24 11.5 4.9 1.3 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Baculo_11_kDa PF06143.11 ORF126492 - 1.5 8.4 8.0 3.7 7.2 8.0 1.8 1 1 0 1 1 1 0 Baculovirus 11 kDa family MCCD1 PF15707.5 ORF124356 - 0.017 15.5 0.1 0.92 10.0 0.0 2.6 3 0 0 3 3 3 0 Mitochondrial coiled-coil domain protein 1 Cupin_2 PF07883.11 ORF122517 - 5.8e-08 32.3 0.1 1e-07 31.6 0.1 1.4 1 0 0 1 1 1 1 Cupin domain ARD PF03079.14 ORF122517 - 0.13 12.5 0.1 0.22 11.7 0.1 1.3 1 0 0 1 1 1 0 ARD/ARD' family SLBP_RNA_bind PF15247.6 ORF120902 - 1.7e-05 24.8 0.1 2.9e-05 24.1 0.1 1.4 1 0 0 1 1 1 1 Histone RNA hairpin-binding protein RNA-binding domain PerB PF06590.11 ORF120679 - 0.02 15.4 0.0 0.035 14.6 0.0 1.4 1 0 0 1 1 1 0 PerB protein Wx5_PLAF3D7 PF09688.10 ORF120585 - 0.038 14.0 1.1 0.038 14.0 1.1 2.0 1 1 2 3 3 3 0 Protein of unknown function (Wx5_PLAF3D7) GST_C PF00043.25 ORF119674 - 1.1e-08 35.2 0.0 2e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF119674 - 5.4e-07 29.5 0.0 8.8e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF119674 - 5.7e-06 26.4 0.0 9.6e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF119674 - 0.2 11.5 0.0 1.4 8.8 0.0 2.0 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain DUF2526 PF10735.9 ORF118907 - 0.068 13.3 1.7 0.15 12.2 1.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2526) Copine PF07002.16 ORF118559 - 1.9e-43 148.4 0.1 2.1e-43 148.3 0.1 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF118559 - 5.7e-07 29.8 0.0 8.4e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 vWA found in TerF C terminus TMEM173 PF15009.6 ORF118559 - 0.11 11.7 0.0 0.18 10.9 0.0 1.4 1 0 0 1 1 1 0 Transmembrane protein 173 F-box PF00646.33 ORF117180 - 0.05 13.5 1.3 0.05 13.5 1.3 1.8 2 0 0 2 2 2 0 F-box domain Abhydrolase_1 PF00561.20 ORF116002 - 5e-08 32.9 0.0 5.9e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF116002 - 3.3e-06 27.9 0.0 3.6e-06 27.7 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family FokI_N PF02981.15 ORF116002 - 0.0092 16.1 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 1 Restriction endonuclease FokI, recognition domain UvsW PF11637.8 ORF116002 - 0.044 13.9 0.0 0.079 13.1 0.0 1.4 1 0 0 1 1 1 0 ATP-dependant DNA helicase UvsW Peptidase_S9 PF00326.21 ORF116002 - 0.092 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Prolyl oligopeptidase family Abhydrolase_4 PF08386.10 ORF116002 - 0.093 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 TAP-like protein Pkinase_C PF00433.24 ORF114674 - 0.0006 20.5 0.1 0.0013 19.4 0.1 1.6 1 0 0 1 1 1 1 Protein kinase C terminal domain Pkinase PF00069.25 ORF114674 - 0.059 12.7 0.0 0.076 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain IMPDH PF00478.25 ORF114514 - 0.02 13.9 0.2 0.023 13.7 0.2 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Phage_holin_3_3 PF16083.5 ORF114514 - 0.16 12.1 0.1 0.16 12.1 0.1 2.5 2 1 0 2 2 2 0 LydA holin phage, holin superfamily III DUF2206 PF09971.9 ORF110306 - 0.64 8.7 5.7 0.76 8.5 5.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) BRCC36_C PF18110.1 ORF109636 - 0.27 11.4 0.8 9.4 6.5 0.0 2.3 2 0 0 2 2 2 0 BRCC36 C-terminal helical domain Dynein_C PF18199.1 ORF105903 - 7.9e-44 150.1 0.0 8.8e-44 150.0 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain DUF5473 PF17567.2 ORF104753 - 0.014 15.6 1.5 0.023 14.9 1.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5473) Methyltransf_23 PF13489.6 ORF10375 - 8.5e-09 35.5 0.0 1e-08 35.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF10375 - 3.6e-05 23.6 0.0 0.00082 19.2 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF10375 - 0.00011 22.8 0.0 0.00018 22.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF10375 - 0.00019 22.1 0.0 0.0003 21.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF10375 - 0.0045 17.7 0.0 0.017 15.8 0.0 1.9 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_9 PF08003.11 ORF10375 - 0.081 11.8 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Ubie_methyltran PF01209.18 ORF10375 - 0.083 12.2 0.0 0.17 11.2 0.0 1.5 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family DUF1456 PF07308.13 ORF103293 - 0.023 15.0 0.1 0.023 15.0 0.1 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1456) DUF1445 PF07286.12 ORF103293 - 2.7 7.9 7.7 3.9 7.4 7.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1445) T2SSG PF08334.11 ORF102558 - 4.3e-37 126.5 0.3 5.1e-37 126.3 0.3 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein G N_methyl PF07963.12 ORF102558 - 6.9e-10 38.1 1.4 1.1e-09 37.4 1.4 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif DUF3399 PF11879.8 ORF101275 - 1.6 9.1 3.2 4.1 7.8 3.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3399) NiFe_hyd_SSU_C PF14720.6 ORF101275 - 2.2 8.7 8.5 5 7.6 2.2 2.4 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal KH_dom-like PF14714.6 ORF100827 - 0.031 14.6 0.2 0.052 13.9 0.2 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PRR20 PF15708.5 ORF100827 - 0.2 11.5 0.2 0.26 11.1 0.2 1.1 1 0 0 1 1 1 0 Proline-rich protein family 20 IMUP PF15761.5 ORF100827 - 2.5 8.9 8.3 4 8.2 8.3 1.3 1 0 0 1 1 1 0 Immortalisation up-regulated protein FXMRP1_C_core PF12235.8 NODE_45557_length_430_cov_1.025316_g37779_i0reverse_frame_1 - 0.11 13.1 2.5 0.16 12.7 2.5 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal DUF2116 PF09889.9 NODE_45557_length_430_cov_1.025316_g37779_i0forward_frame_1 - 2.5 8.2 5.9 3.1 7.9 2.8 2.0 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Pkinase PF00069.25 NODE_45551_length_430_cov_1.898734_g37773_i0forward_frame_1 - 0.00092 18.6 0.0 0.0013 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 NODE_45551_length_430_cov_1.898734_g37773_i0forward_frame_1 - 0.054 12.8 0.0 0.08 12.3 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family EB PF01683.18 NODE_45548_length_430_cov_2.144304_g37770_i0forward_frame_1 - 7 7.0 17.8 0.1 12.9 4.2 2.4 2 0 0 2 2 2 0 EB module SPAN PF02510.14 NODE_45546_length_430_cov_2.364557_g37768_i0reverse_frame_1 - 0.014 14.6 2.4 0.017 14.3 2.4 1.1 1 0 0 1 1 1 0 Surface presentation of antigens protein Sulfatase PF00884.23 NODE_45545_length_430_cov_2.427848_g37767_i0forward_frame_1 - 0.0031 17.0 0.3 0.0098 15.3 0.0 1.8 2 0 0 2 2 2 1 Sulfatase RNA_helicase PF00910.22 NODE_45545_length_430_cov_2.427848_g37767_i0forward_frame_1 - 0.13 12.6 0.4 0.26 11.7 0.3 1.5 2 0 0 2 2 2 0 RNA helicase Afaf PF15339.6 NODE_45541_length_430_cov_2.645570_g37763_i0reverse_frame_1 - 0.42 10.3 2.0 14 5.3 0.2 2.1 2 0 0 2 2 2 0 Acrosome formation-associated factor DnaJ PF00226.31 NODE_45537_length_430_cov_3.587342_g37759_i0reverse_frame_1 - 9.1e-18 64.1 2.7 1.5e-17 63.4 2.7 1.4 1 0 0 1 1 1 1 DnaJ domain MaoC_dehydratas PF01575.19 NODE_45536_length_430_cov_5.293671_g37758_i0forward_frame_1 - 0.12 12.0 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 MaoC like domain Peptidase_M35 PF02102.15 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_1 - 0.093 11.6 2.6 0.12 11.3 2.6 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family Flavodoxin_1 PF00258.25 NODE_45526_length_430_cov_68.329114_g37748_i0forward_frame_1 - 6.6e-05 23.1 0.0 0.00094 19.4 0.0 2.0 1 1 1 2 2 2 1 Flavodoxin Flavodoxin_5 PF12724.7 NODE_45526_length_430_cov_68.329114_g37748_i0forward_frame_1 - 0.018 15.3 0.0 0.027 14.7 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain FMN_red PF03358.15 NODE_45526_length_430_cov_68.329114_g37748_i0forward_frame_1 - 0.051 13.3 0.0 0.068 12.9 0.0 1.2 1 0 0 1 1 1 0 NADPH-dependent FMN reductase LysM PF01476.20 NODE_45476_length_431_cov_2.343434_g37702_i0reverse_frame_1 - 0.15 12.2 0.0 0.35 11.0 0.0 1.6 1 0 0 1 1 1 0 LysM domain DUF615 PF04751.14 NODE_45470_length_431_cov_2.939394_g37696_i0reverse_frame_1 - 0.046 13.7 0.3 0.057 13.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF615) MAP70 PF07058.11 NODE_45470_length_431_cov_2.939394_g37696_i0forward_frame_1 - 0.092 11.5 1.7 0.11 11.3 1.7 1.0 1 0 0 1 1 1 0 Microtubule-associated protein 70 SR-25 PF10500.9 NODE_45470_length_431_cov_2.939394_g37696_i0forward_frame_1 - 6.5 6.3 9.7 8.2 6.0 9.7 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF2618 PF10940.8 NODE_45469_length_431_cov_2.954545_g37695_i0reverse_frame_1 - 0.16 11.8 5.4 6.7 6.6 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) FKBP_C PF00254.28 NODE_45468_length_431_cov_3.075758_g37694_i0forward_frame_1 - 5.7e-15 55.4 0.0 8.6e-15 54.8 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase UxuA PF03786.13 NODE_45466_length_431_cov_3.131313_g37692_i0forward_frame_1 - 2.1e-50 171.5 0.0 2.3e-50 171.4 0.0 1.0 1 0 0 1 1 1 1 D-mannonate dehydratase (UxuA) Catalase-rel PF06628.12 NODE_45466_length_431_cov_3.131313_g37692_i0forward_frame_1 - 0.00017 21.7 0.0 0.00047 20.3 0.0 1.7 1 1 1 2 2 2 1 Catalase-related immune-responsive Chorismate_bind PF00425.18 NODE_45442_length_431_cov_110.090909_g37668_i0reverse_frame_1 - 0.027 14.0 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 chorismate binding enzyme Colipase PF01114.18 NODE_45442_length_431_cov_110.090909_g37668_i0forward_frame_1 - 0.064 12.9 1.6 0.064 12.9 1.6 2.1 2 0 0 2 2 2 0 Colipase, N-terminal domain Rrn6 PF10214.9 NODE_45439_length_431_cov_156.207071_g37665_i0reverse_frame_1 - 0.039 12.5 0.3 0.044 12.3 0.3 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF5572 PF17733.1 NODE_45439_length_431_cov_156.207071_g37665_i0forward_frame_1 - 0.16 11.8 0.0 0.3 11.0 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5572) FTR_C PF02741.15 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_1 - 4.3e-05 23.6 0.1 2.6 8.0 0.0 3.8 1 1 3 4 4 4 2 FTR, proximal lobe DiS_P_DiS PF06750.13 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_1 - 0.022 14.9 6.9 41 4.4 0.1 4.0 4 0 0 4 4 4 0 Bacterial Peptidase A24 N-terminal domain Toxin_38 PF14866.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_1 - 4.9 7.5 17.8 23 5.3 0.2 4.4 4 0 0 4 4 4 0 Potassium channel toxin SPOB_a PF14689.6 NODE_45418_length_432_cov_1.919395_g37645_i0forward_frame_1 - 0.061 13.0 0.1 7.1 6.4 0.0 2.4 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain EIF_2_alpha PF07541.12 NODE_45418_length_432_cov_1.919395_g37645_i0forward_frame_1 - 0.1 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit CBP_BcsS PF17036.5 NODE_45416_length_432_cov_2.060453_g37643_i0forward_frame_1 - 0.14 12.1 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsS Beach PF02138.18 NODE_45409_length_432_cov_2.843829_g37636_i0reverse_frame_1 - 1.2e-25 90.5 0.1 1.6e-25 90.0 0.1 1.2 1 0 0 1 1 1 1 Beige/BEACH domain DUF4238 PF14022.6 NODE_45409_length_432_cov_2.843829_g37636_i0reverse_frame_1 - 0.027 14.0 0.1 0.032 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4238) Methyltransf_34 PF11312.8 NODE_45396_length_432_cov_64.435768_g37623_i0reverse_frame_1 - 0.11 11.8 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase ETRAMP PF09716.10 NODE_45392_length_432_cov_77.027708_g37619_i0reverse_frame_1 - 0.27 11.3 1.5 0.42 10.7 1.5 1.5 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) XRN_N PF03159.18 NODE_45388_length_432_cov_86.259446_g37615_i0reverse_frame_1 - 3.9e-41 141.1 0.0 4.4e-41 140.9 0.0 1.0 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus DUF1072 PF06380.11 NODE_45384_length_432_cov_101.785894_g37611_i0forward_frame_1 - 0.12 12.2 3.8 0.42 10.5 3.8 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) HCV_NS5a PF01506.19 NODE_45383_length_432_cov_105.289673_g37610_i0forward_frame_1 - 0.026 14.4 0.8 0.041 13.7 0.8 1.3 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a protein membrane anchor ThrE_2 PF12821.7 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_1 - 0.57 10.3 3.9 3.2 7.9 1.1 2.3 1 1 1 2 2 2 0 Threonine/Serine exporter, ThrE HPIP_like PF18524.1 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_1 - 6.7 6.6 11.5 10 6.0 0.2 4.0 5 0 0 5 5 5 0 High potential iron-sulfur protein like Viral_DNA_Zn_bi PF03728.13 NODE_45369_length_432_cov_241.037783_g37596_i0forward_frame_1 - 3 8.4 11.3 0.19 12.3 2.0 2.4 1 1 1 2 2 2 0 Viral DNA-binding protein, zinc binding domain Herpes_pp85 PF04637.12 NODE_45369_length_432_cov_241.037783_g37596_i0forward_frame_1 - 9.2 4.5 7.6 11 4.2 7.6 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) MAP1B_neuraxin PF00414.17 NODE_45367_length_432_cov_926.891688_g37594_i0reverse_frame_1 - 0.37 10.4 2.3 0.61 9.7 2.3 1.3 1 0 0 1 1 1 0 Neuraxin and MAP1B repeat Endotoxin_M PF00555.19 NODE_45364_length_432_cov_6732.755668_g37593_i0reverse_frame_1 - 0.029 14.4 0.8 0.034 14.2 0.8 1.1 1 0 0 1 1 1 0 delta endotoxin Phage_SSB PF16773.5 NODE_45356_length_433_cov_2.133166_g37585_i0forward_frame_3 - 2.7 8.1 9.4 0.15 12.2 2.5 2.3 1 1 1 2 2 2 0 Lactococcus phage single-stranded DNA binding protein V_ATPase_I PF01496.19 NODE_45355_length_433_cov_2.371859_g37584_i0reverse_frame_2 - 1.8e-59 201.5 3.5 2e-59 201.4 3.5 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Fe-ADH PF00465.19 NODE_45347_length_433_cov_2.922111_g37576_i0forward_frame_3 - 4.1e-53 180.5 2.4 4.5e-53 180.4 2.4 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 NODE_45347_length_433_cov_2.922111_g37576_i0forward_frame_3 - 1.8e-07 31.2 0.7 2.1e-07 30.9 0.7 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase HTH_AraC PF00165.23 NODE_45345_length_433_cov_3.050251_g37574_i0reverse_frame_2 - 4.2e-07 29.9 0.0 7.4e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family AraC_binding PF02311.19 NODE_45345_length_433_cov_3.050251_g37574_i0reverse_frame_2 - 0.015 15.2 0.3 0.029 14.3 0.3 1.7 1 1 0 1 1 1 0 AraC-like ligand binding domain HMGL-like PF00682.19 NODE_45341_length_433_cov_3.992462_g37570_i0forward_frame_3 - 6.4e-27 94.8 0.1 7.3e-27 94.6 0.1 1.1 1 0 0 1 1 1 1 HMGL-like YvrJ PF12841.7 NODE_45338_length_433_cov_12.635678_g37567_i0reverse_frame_2 - 0.96 9.0 4.0 10 5.7 0.3 2.4 2 0 0 2 2 2 0 YvrJ protein family DUF5435 PF17503.2 NODE_45338_length_433_cov_12.635678_g37567_i0forward_frame_2 - 0.29 10.8 2.1 12 5.6 0.2 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5435) DUF478 PF04334.12 NODE_45338_length_433_cov_12.635678_g37567_i0forward_frame_2 - 1.1 9.4 5.6 12 6.0 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF478) TMPIT PF07851.13 NODE_45334_length_433_cov_55.851759_g37563_i0forward_frame_2 - 0.41 9.8 1.6 0.6 9.3 1.6 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF4604 PF15377.6 NODE_45331_length_433_cov_65.698492_g37560_i0forward_frame_3 - 0.42 11.0 10.4 0.74 10.2 10.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4604) PhnG PF06754.12 NODE_45330_length_433_cov_69.733668_g37559_i0reverse_frame_3 - 0.057 13.4 0.2 0.065 13.2 0.2 1.1 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG FAM199X PF15814.5 NODE_45330_length_433_cov_69.733668_g37559_i0reverse_frame_3 - 3.1 6.8 7.5 4.1 6.4 7.5 1.2 1 0 0 1 1 1 0 Protein family FAM199X Sporozoite_P67 PF05642.11 NODE_45321_length_433_cov_91.615578_g36850_i1reverse_frame_3 - 0.44 8.6 0.5 0.54 8.3 0.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen GARS_C PF02843.16 NODE_45317_length_433_cov_106.035176_g37547_i0reverse_frame_2 - 0.046 14.0 0.0 0.058 13.7 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, C domain ABM PF03992.16 NODE_45309_length_433_cov_153.884422_g37540_i0forward_frame_3 - 0.002 18.2 0.0 0.003 17.6 0.0 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF1908 PF08926.11 NODE_45303_length_433_cov_208.133166_g37534_i0forward_frame_2 - 0.094 11.8 0.7 0.12 11.5 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) RNA_pol_Rpb6 PF01192.22 NODE_45299_length_433_cov_324.685930_g37530_i0reverse_frame_3 - 8e-14 51.3 0.1 1.3e-13 50.6 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb6 DUF348 PF03990.14 NODE_45299_length_433_cov_324.685930_g37530_i0reverse_frame_3 - 0.063 13.0 0.0 0.36 10.6 0.0 2.1 2 0 0 2 2 2 0 G5-linked-Ubiquitin-like domain CXCR4_N PF12109.8 NODE_45299_length_433_cov_324.685930_g37530_i0reverse_frame_3 - 0.13 12.5 1.9 0.33 11.2 1.9 1.8 1 0 0 1 1 1 0 CXCR4 Chemokine receptor N terminal G8 PF10162.9 NODE_45294_length_433_cov_5840.464824_g37525_i0reverse_frame_3 - 0.033 14.3 0.0 0.044 13.8 0.0 1.2 1 0 0 1 1 1 0 G8 domain Cas_Csy2 PF09614.10 NODE_45294_length_433_cov_5840.464824_g37525_i0forward_frame_3 - 0.045 13.1 0.0 0.056 12.8 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy2) Met_10 PF02475.16 NODE_45293_length_434_cov_1.501253_g37524_i0reverse_frame_3 - 0.068 12.9 0.2 0.086 12.6 0.2 1.2 1 0 0 1 1 1 0 Met-10+ like-protein DUF2757 PF10955.8 NODE_45284_length_434_cov_3.338346_g37515_i0reverse_frame_3 - 0.067 13.5 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2757) SUR7 PF06687.12 NODE_45280_length_434_cov_25.536341_g37511_i0reverse_frame_3 - 6.3 6.4 11.7 8.4 5.9 11.7 1.3 1 0 0 1 1 1 0 SUR7/PalI family CK_II_beta PF01214.18 NODE_45280_length_434_cov_25.536341_g37511_i0reverse_frame_2 - 0.0058 16.5 2.1 0.0074 16.1 2.1 1.1 1 0 0 1 1 1 1 Casein kinase II regulatory subunit Casc1_N PF15927.5 NODE_45280_length_434_cov_25.536341_g37511_i0forward_frame_3 - 0.95 9.1 19.9 1.4 8.6 19.9 1.2 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus IDEAL PF08858.10 NODE_45278_length_434_cov_30.508772_g37509_i0reverse_frame_2 - 0.096 12.4 0.5 0.23 11.2 0.5 1.7 1 0 0 1 1 1 0 IDEAL domain PARM PF17061.5 NODE_45253_length_434_cov_135.418546_g37485_i0reverse_frame_3 - 0.25 11.4 6.5 0.29 11.2 6.5 1.0 1 0 0 1 1 1 0 PARM BNIP3 PF06553.12 NODE_45253_length_434_cov_135.418546_g37485_i0reverse_frame_3 - 0.38 10.4 13.8 0.45 10.2 13.8 1.2 1 0 0 1 1 1 0 BNIP3 RR_TM4-6 PF06459.12 NODE_45253_length_434_cov_135.418546_g37485_i0reverse_frame_3 - 0.85 9.4 26.6 1 9.1 26.6 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF4604 PF15377.6 NODE_45253_length_434_cov_135.418546_g37485_i0reverse_frame_3 - 2.6 8.4 41.0 4 7.8 41.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) PBP_sp32 PF07222.12 NODE_45253_length_434_cov_135.418546_g37485_i0reverse_frame_3 - 7.7 5.9 15.5 9.9 5.5 15.5 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 DUF2477 PF10631.9 NODE_45253_length_434_cov_135.418546_g37485_i0forward_frame_2 - 0.084 13.5 6.9 0.12 13.1 6.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2477) DUF1279 PF06916.13 NODE_45253_length_434_cov_135.418546_g37485_i0forward_frame_2 - 0.75 10.4 2.2 1 10.0 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1279) Stc1 PF12898.7 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_2 - 0.1 13.2 4.5 7.3 7.2 0.7 2.7 2 1 0 2 2 2 0 Stc1 domain Ribosomal_S26e PF01283.19 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_2 - 1.4 9.4 4.8 4 7.9 0.1 2.6 3 0 0 3 3 3 0 Ribosomal protein S26e GAPT PF11770.8 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_2 - 1.6 8.6 4.6 3.1 7.7 0.1 2.7 2 1 1 3 3 3 0 GRB2-binding adapter (GAPT) Fer4_14 PF13394.6 NODE_45252_length_434_cov_135.709273_g37484_i0reverse_frame_2 - 2.9 8.1 6.7 51 4.0 0.2 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain DUF3439 PF11921.8 NODE_45252_length_434_cov_135.709273_g37484_i0forward_frame_3 - 0.51 10.3 4.7 0.39 10.7 0.2 2.4 1 1 2 3 3 3 0 Domain of unknown function (DUF3439) Phe_ZIP PF08916.11 NODE_45252_length_434_cov_135.709273_g37484_i0forward_frame_2 - 1.1 10.1 9.1 24 5.7 0.3 3.1 2 1 1 3 3 3 0 Phenylalanine zipper EcpB_C PF18649.1 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 0.14 12.1 0.2 0.14 12.1 0.2 1.9 2 0 0 2 2 2 0 EcpB C-terminal domain DUF913 PF06025.12 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 0.64 8.9 8.0 0.72 8.8 8.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Neur_chan_memb PF02932.16 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 3.5 7.6 11.8 4.1 7.4 11.8 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region FAM60A PF15396.6 NODE_45249_length_434_cov_140.458647_g37481_i0reverse_frame_2 - 4.4 7.3 15.3 6.4 6.7 15.3 1.4 1 0 0 1 1 1 0 Protein Family FAM60A Dzip-like_N PF13815.6 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.0084 16.1 4.0 0.011 15.7 3.2 1.6 1 1 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal DUF4315 PF14193.6 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.013 15.5 1.2 0.013 15.5 1.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4315) Sedlin_N PF04628.13 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.031 14.4 2.6 0.07 13.3 2.6 1.6 1 1 0 1 1 1 0 Sedlin, N-terminal conserved region STAT_alpha PF01017.20 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.11 12.4 9.4 1.1 9.2 2.2 2.1 1 1 1 2 2 2 0 STAT protein, all-alpha domain TMF_DNA_bd PF12329.8 NODE_45248_length_434_cov_155.090226_g37480_i0reverse_frame_2 - 0.33 11.0 12.4 0.061 13.3 4.2 2.4 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding XPG_I PF00867.18 NODE_45244_length_434_cov_250.927318_g37476_i0reverse_frame_3 - 0.086 13.2 0.1 0.15 12.4 0.1 1.4 1 0 0 1 1 1 0 XPG I-region L71 PF02448.15 NODE_45241_length_434_cov_412.964912_g37474_i0forward_frame_3 - 0.03 14.7 0.0 0.05 14.0 0.0 1.4 1 0 0 1 1 1 0 L71 family CathepsinC_exc PF08773.11 NODE_45219_length_435_cov_2.717500_g37452_i0forward_frame_2 - 0.00035 20.8 0.3 0.0011 19.2 0.1 1.8 2 0 0 2 2 2 1 Cathepsin C exclusion domain AP-5_subunit_s1 PF15001.6 NODE_45219_length_435_cov_2.717500_g37452_i0forward_frame_2 - 0.047 13.7 0.1 0.055 13.5 0.1 1.1 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 SprB PF13573.6 NODE_45208_length_435_cov_11.257500_g37441_i0forward_frame_2 - 1.7 8.5 8.9 2.3 8.1 0.8 3.0 3 0 0 3 3 3 0 SprB repeat NUFIP2 PF15293.6 NODE_45200_length_435_cov_65.387500_g37433_i0reverse_frame_2 - 0.19 10.6 0.2 0.25 10.2 0.2 1.1 1 0 0 1 1 1 0 Nuclear fragile X mental retardation-interacting protein 2 TadF PF16964.5 NODE_45198_length_435_cov_68.602500_g37431_i0forward_frame_2 - 0.054 13.2 0.2 0.13 12.1 0.1 1.6 1 1 0 1 1 1 0 Putative tight adherence pilin protein F LAG1-DNAbind PF09271.11 NODE_45192_length_435_cov_77.882500_g37425_i0reverse_frame_2 - 0.014 16.1 5.6 0.018 15.7 5.6 1.1 1 0 0 1 1 1 0 LAG1, DNA binding Oxidored_q5_N PF01059.17 NODE_45192_length_435_cov_77.882500_g37425_i0forward_frame_2 - 0.052 13.6 18.2 0.055 13.5 0.5 2.2 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Herpes_LMP1 PF05297.11 NODE_45192_length_435_cov_77.882500_g37425_i0forward_frame_2 - 0.39 9.9 4.5 0.54 9.4 4.5 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF2207 PF09972.9 NODE_45192_length_435_cov_77.882500_g37425_i0forward_frame_2 - 7.7 5.2 7.8 10 4.7 7.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) LCAT PF02450.15 NODE_45191_length_435_cov_79.587500_g37424_i0forward_frame_2 - 0.008 15.4 0.0 0.0092 15.2 0.0 1.1 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase zf-Tim10_DDP PF02953.15 NODE_45183_length_435_cov_117.132500_g37416_i0reverse_frame_2 - 0.0051 16.4 2.9 0.012 15.2 0.8 2.4 2 1 0 2 2 2 1 Tim10/DDP family zinc finger Helitron_like_N PF14214.6 NODE_45181_length_435_cov_126.860000_g37414_i0forward_frame_3 - 0.036 14.3 0.8 0.049 13.8 0.6 1.3 1 1 0 1 1 1 0 Helitron helicase-like domain at N-terminus RRM_1 PF00076.22 NODE_45181_length_435_cov_126.860000_g37414_i0forward_frame_2 - 4.3e-16 58.5 0.0 7.5e-16 57.7 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 NODE_45181_length_435_cov_126.860000_g37414_i0forward_frame_2 - 4.7e-05 23.0 0.0 5.7e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RCC1_2 PF13540.6 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 1e-23 82.5 5.6 4.4e-10 39.1 0.4 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 1.2e-05 25.9 3.5 0.32 11.7 0.8 4.4 4 1 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat PQQ_3 PF13570.6 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 0.037 14.5 0.8 8.7 7.0 0.0 3.0 3 0 0 3 3 3 0 PQQ-like domain MoaF_C PF17409.2 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 0.17 11.6 0.0 0.67 9.6 0.0 1.9 2 0 0 2 2 2 0 MoaF C-terminal domain Kelch_4 PF13418.6 NODE_45180_length_435_cov_128.112500_g37413_i0reverse_frame_3 - 0.23 11.5 2.4 2.8 8.0 0.1 2.6 3 0 0 3 3 3 0 Galactose oxidase, central domain Ribosomal_60s PF00428.19 NODE_45178_length_435_cov_158.395000_g37411_i0forward_frame_3 - 3 8.5 4.6 0.6 10.7 0.3 1.8 2 0 0 2 2 2 0 60s Acidic ribosomal protein PWWP PF00855.17 NODE_45173_length_435_cov_200.975000_g37406_i0reverse_frame_2 - 0.0056 17.1 0.0 0.0099 16.3 0.0 1.4 1 0 0 1 1 1 1 PWWP domain Nrap_D6 PF17407.2 NODE_45172_length_435_cov_210.925000_g37405_i0reverse_frame_2 - 0.025 14.8 0.1 0.04 14.1 0.1 1.3 1 0 0 1 1 1 0 Nrap protein domain 6 Laminin_II PF06009.12 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.0015 18.6 12.5 0.013 15.5 4.4 2.2 1 1 1 2 2 2 1 Laminin Domain II CDC50 PF03381.15 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.013 15.1 2.5 0.025 14.1 2.4 1.7 1 1 0 1 1 1 0 LEM3 (ligand-effect modulator 3) family / CDC50 family KxDL PF10241.9 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.035 14.4 19.5 0.28 11.5 5.2 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein GAS PF13851.6 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.058 12.7 23.8 0.068 12.5 23.8 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Syntaxin-6_N PF09177.11 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.11 13.0 10.1 0.99 10.0 3.3 2.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Flu_NS2 PF00601.19 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.34 11.2 10.0 0.075 13.3 1.7 2.3 1 1 1 2 2 2 0 Influenza non-structural protein (NS2) DUF262 PF03235.14 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.62 10.2 9.0 0.74 9.9 9.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF262 SNARE PF05739.19 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.71 9.9 5.0 0.35 10.9 0.8 2.5 3 0 0 3 3 3 0 SNARE domain DUF4854 PF16146.5 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.84 10.0 8.2 0.37 11.1 1.9 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4854) YvrJ PF12841.7 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 0.99 9.0 2.6 1.9 8.1 1.4 2.1 2 0 0 2 2 2 0 YvrJ protein family DUF668 PF05003.12 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 1.2 9.7 8.6 0.61 10.6 0.4 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF668) Fib_alpha PF08702.10 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 1.6 8.9 19.7 13 6.0 19.7 2.0 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4407 PF14362.6 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 1.6 8.0 9.9 3 7.1 9.9 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) NPV_P10 PF05531.12 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 2 8.9 8.3 34 5.0 0.5 3.2 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF641 PF04859.12 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 3.2 8.1 17.3 0.65 10.3 6.3 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Tweety PF04906.13 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 3.7 6.1 8.0 1 7.9 4.1 1.8 1 1 1 2 2 2 0 Tweety Exonuc_VII_L PF02601.15 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 6.4 6.3 14.8 9.3 5.7 14.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Atg14 PF10186.9 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 7.6 5.5 20.3 13 4.8 19.6 1.7 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1664 PF07889.12 NODE_45169_length_435_cov_420.705000_g37402_i0forward_frame_2 - 9.5 6.3 12.0 6.9 6.7 3.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) ORMDL PF04061.14 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_3 - 0.19 11.6 3.8 0.22 11.3 3.7 1.3 1 1 0 1 1 1 0 ORMDL family SepZ PF06066.11 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_3 - 3.3 8.0 10.0 22 5.3 0.8 2.7 1 1 1 2 2 2 0 SepZ DAOA PF15199.6 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_2 - 0.0027 18.1 0.1 0.82 10.1 0.0 2.2 2 0 0 2 2 2 2 D-amino acid oxidase activator WRC PF08879.10 NODE_45164_length_435_cov_1275.122500_g37397_i0reverse_frame_2 - 1.7 8.4 19.3 0.56 9.9 1.0 4.5 4 1 0 4 4 4 0 WRC COX17 PF05051.13 NODE_45164_length_435_cov_1275.122500_g37397_i0forward_frame_3 - 0.15 12.4 2.3 24 5.4 0.2 3.1 3 0 0 3 3 3 0 Cytochrome C oxidase copper chaperone (COX17) Tcf25 PF04910.14 NODE_45162_length_435_cov_2066.295000_g37395_i0forward_frame_2 - 0.017 14.2 0.0 0.019 14.0 0.0 1.1 1 0 0 1 1 1 0 Transcriptional repressor TCF25 ObR_Ig PF18589.1 NODE_45162_length_435_cov_2066.295000_g37395_i0forward_frame_2 - 0.12 12.8 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 Obesity receptor immunoglobulin like domain zf-C3HC4 PF00097.25 ORF98361 - 1.1e-07 31.6 1.5 7.3e-07 29.0 0.8 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF98361 - 1.8e-06 28.2 5.2 7.2e-06 26.2 1.0 2.4 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF98361 - 1.1e-05 25.6 1.0 2.5e-05 24.5 1.0 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF98361 - 1.7e-05 24.7 0.7 1.7e-05 24.7 0.7 2.3 2 1 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF98361 - 0.00039 20.2 2.3 0.0021 17.9 1.3 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF98361 - 0.0011 19.0 2.4 0.0046 17.1 2.4 2.0 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF98361 - 0.0018 18.3 0.9 0.0018 18.3 0.9 2.2 2 1 1 3 3 3 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF98361 - 0.0019 18.0 1.9 0.0019 18.0 1.9 2.5 2 2 0 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF98361 - 0.015 15.3 0.5 0.015 15.3 0.5 1.7 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger FYVE PF01363.21 ORF98361 - 0.022 14.9 1.9 0.042 14.0 1.9 1.4 1 0 0 1 1 1 0 FYVE zinc finger zf-4CXXC_R1 PF10497.9 ORF98361 - 0.034 14.4 2.6 0.056 13.7 2.9 1.4 1 1 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 zf-RING_6 PF14835.6 ORF98361 - 0.039 13.8 0.9 0.069 13.0 0.1 1.8 2 0 0 2 2 2 0 zf-RING of BARD1-type protein zf-MIZ PF02891.20 ORF98361 - 0.31 10.8 4.3 0.14 11.9 1.6 1.8 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger zf-RING_4 PF14570.6 ORF98361 - 0.35 10.7 7.3 0.21 11.4 4.6 2.1 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_2 PF13923.6 ORF98361 - 1.1 9.2 13.0 0.68 9.8 6.4 3.2 2 2 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) TMEM51 PF15345.6 ORF97987 - 0.026 14.4 0.2 0.038 13.8 0.2 1.3 1 0 0 1 1 1 0 Transmembrane protein 51 RS4NT PF08071.12 ORF97987 - 0.33 11.1 1.6 0.58 10.3 1.6 1.4 1 0 0 1 1 1 0 RS4NT (NUC023) domain Efg1 PF10153.9 ORF97543 - 0.02 15.3 0.7 0.03 14.7 0.2 1.5 2 0 0 2 2 2 0 rRNA-processing protein Efg1 Taeniidae_ag PF05596.11 ORF97107 - 0.084 12.9 0.2 12 6.0 0.0 2.3 1 1 1 2 2 2 0 Taeniidae antigen Neuropep_like PF15161.6 ORF95796 - 0.085 12.5 0.6 0.17 11.6 0.6 1.5 1 0 0 1 1 1 0 Neuropeptide-like DUF2686 PF10887.8 ORF95306 - 3.3e-87 292.0 0.2 3.6e-87 291.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2686) LupA PF18242.1 ORF94412 - 0.024 14.3 0.1 0.096 12.3 0.0 1.8 1 1 1 2 2 2 0 Legionella ubiquitin-specific protease A domain DUF334 PF03904.13 ORF94412 - 1.5 8.3 9.7 0.49 9.9 6.6 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF334) S_4TM PF18159.1 ORF92789 - 0.32 10.3 3.4 0.46 9.7 3.4 1.2 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF2070 PF09843.9 ORF92789 - 3.9 5.6 17.0 4 5.6 17.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TerC PF03741.16 ORF92720 - 4.3e-27 94.9 10.2 1.8e-26 92.9 7.3 2.0 2 0 0 2 2 2 1 Integral membrane protein TerC family DUF2070 PF09843.9 ORF92720 - 0.85 7.8 10.4 0.98 7.6 10.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TMEM169 PF15052.6 ORF92720 - 0.9 9.7 6.5 0.34 11.0 4.1 1.5 1 1 1 2 2 2 0 TMEM169 protein family DUF202 PF02656.15 ORF92720 - 1.9 9.0 5.7 5.4 7.5 5.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF202) PAP2 PF01569.21 ORF92720 - 3.4 7.4 9.2 3 7.6 8.0 1.4 1 1 0 1 1 1 0 PAP2 superfamily DUF4191 PF13829.6 ORF92720 - 8.2 5.7 9.6 0.79 9.0 4.8 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) DUF3043 PF11241.8 ORF92720 - 8.9 6.3 6.1 1.4 8.9 0.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3043) ALG3 PF05208.13 ORF90266 - 8.3e-12 45.2 2.3 9.9e-12 44.9 2.3 1.1 1 0 0 1 1 1 1 ALG3 protein DUF4834 PF16118.5 ORF89940 - 0.0016 19.4 0.3 0.002 19.0 0.3 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4834) Adeno_GP19K PF04881.13 ORF89940 - 0.0046 17.0 0.9 0.007 16.4 0.9 1.3 1 0 0 1 1 1 1 Adenovirus GP19K Pox_A14 PF05767.12 ORF89940 - 0.011 15.8 0.5 0.016 15.3 0.5 1.3 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 LRR19-TM PF15176.6 ORF89940 - 0.013 15.5 0.2 0.022 14.8 0.2 1.4 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Ac76 PF05814.11 ORF89940 - 0.022 14.7 0.8 0.042 13.9 0.8 1.4 1 0 0 1 1 1 0 Orf76 (Ac76) O-antigen_lig PF13425.6 ORF89940 - 0.036 12.9 1.0 0.039 12.7 1.0 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Nucleoside_tran PF01733.18 ORF89940 - 0.059 12.7 0.2 0.069 12.5 0.2 1.1 1 0 0 1 1 1 0 Nucleoside transporter MLANA PF14991.6 ORF89940 - 0.081 13.2 0.1 0.11 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein melan-A Pox_RNA_pol PF03293.14 ORF89940 - 0.093 12.4 2.1 0.15 11.8 0.6 1.8 1 1 0 2 2 2 0 Poxvirus DNA-directed RNA polymerase, 18 kD subunit DUF3139 PF11337.8 ORF89940 - 0.17 12.6 3.8 0.26 12.0 3.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) OAD_gamma PF04277.13 ORF89940 - 0.2 12.3 1.7 0.35 11.5 1.7 1.5 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Chordopox_A13L PF05961.11 ORF89940 - 2 8.7 5.8 5.3 7.4 5.8 1.8 1 1 0 1 1 1 0 Chordopoxvirus A13L protein Sigma_reg_N PF13800.6 ORF89940 - 3.4 8.0 5.9 5.2 7.4 5.9 1.6 1 1 0 1 1 1 0 Sigma factor regulator N-terminal UPF0139 PF03669.13 ORF89640 - 0.021 14.7 0.1 0.066 13.1 0.1 1.8 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) zf_C2H2_6 PF18450.1 ORF89640 - 0.13 12.0 0.5 0.13 12.0 0.5 2.3 2 1 0 2 2 2 0 Zinc Finger domain PHF12_MRG_bd PF16737.5 ORF88385 - 0.0031 17.2 0.0 0.11 12.2 0.0 2.5 2 0 0 2 2 2 2 PHD finger protein 12 MRG binding domain LolA PF03548.15 ORF88218 - 0.04 13.6 0.0 0.05 13.3 0.0 1.3 1 0 0 1 1 1 0 Outer membrane lipoprotein carrier protein LolA DUF5351 PF17302.2 ORF86056 - 0.14 12.4 0.1 0.14 12.4 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5351) Glyco_hydro_42C PF08533.10 ORF84784 - 0.059 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain TEX12 PF15219.6 ORF84745 - 0.034 14.5 0.1 0.065 13.6 0.1 1.5 1 0 0 1 1 1 0 Testis-expressed 12 PPI_Ypi1 PF07491.11 ORF8443 - 0.071 13.0 1.4 2.7 7.9 0.4 2.3 2 0 0 2 2 2 0 Protein phosphatase inhibitor RuvB_C PF05491.13 ORF82765 - 0.077 12.9 0.1 0.31 10.9 0.1 2.1 1 1 1 2 2 2 0 RuvB C-terminal winged helix domain DUF3040 PF11239.8 ORF79193 - 0.13 12.5 0.3 1.9 8.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks178.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks178.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks178.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks178.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- BRE1 PF08647.11 ORF77574 - 0.0035 17.4 13.2 0.0082 16.2 5.3 2.3 2 1 0 2 2 2 2 BRE1 E3 ubiquitin ligase TRAF_BIRC3_bd PF16673.5 ORF77574 - 0.0072 16.1 0.5 0.0072 16.1 0.5 3.1 3 1 1 4 4 4 1 TNF receptor-associated factor BIRC3 binding domain Tropomyosin_1 PF12718.7 ORF77574 - 0.019 15.1 3.9 0.019 15.1 3.9 2.1 2 1 0 2 2 2 0 Tropomyosin like HrpB7 PF09486.10 ORF77574 - 0.035 14.5 0.0 0.035 14.5 0.0 1.6 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) RPW8 PF05659.11 ORF77574 - 0.097 12.4 10.7 0.4 10.4 1.7 2.9 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF641 PF04859.12 ORF77574 - 0.18 12.1 7.2 0.15 12.4 5.6 1.7 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DivIC PF04977.15 ORF77574 - 1.9 8.3 7.5 0.35 10.7 3.3 2.0 2 1 0 2 2 2 0 Septum formation initiator FlaC_arch PF05377.11 ORF77574 - 2.6 8.5 10.4 26 5.3 6.7 3.3 2 2 1 3 3 3 0 Flagella accessory protein C (FlaC) Csm1_N PF18504.1 ORF77574 - 2.8 8.3 9.9 0.29 11.5 2.6 2.6 2 1 0 2 2 2 0 Csm1 N-terminal domain LRS4 PF10422.9 ORF77574 - 5.9 6.4 13.5 52 3.3 13.5 2.0 1 1 0 1 1 1 0 Monopolin complex subunit LRS4 Tom37_C PF11801.8 ORF76857 - 0.1 12.6 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Tom37 C-terminal domain DUF898 PF05987.13 ORF75973 - 0.0022 17.1 0.0 0.0028 16.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF898) TMEM100 PF16311.5 ORF75973 - 0.018 14.6 0.5 0.057 13.0 0.1 1.9 1 1 1 2 2 2 0 Transmembrane protein 100 ABC_export PF16962.5 ORF75973 - 0.047 12.1 0.2 0.058 11.8 0.2 1.1 1 0 0 1 1 1 0 Putative ABC exporter CSG2 PF16965.5 ORF75973 - 0.063 12.2 0.0 0.069 12.1 0.0 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator EphA2_TM PF14575.6 ORF75973 - 0.064 14.1 0.2 2.1 9.3 0.0 2.2 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Neurensin PF14927.6 ORF75973 - 0.091 12.5 0.0 0.13 12.0 0.0 1.4 1 1 0 1 1 1 0 Neurensin TMEM190 PF15431.6 ORF75973 - 0.14 12.3 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 190 Pox_A14 PF05767.12 ORF75973 - 0.27 11.4 2.3 12 6.1 0.4 2.3 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 Ribosom_S12_S23 PF00164.25 ORF75478 - 4e-43 145.7 0.4 5.5e-43 145.2 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Neuropep_like PF15161.6 ORF74916 - 0.085 12.5 0.6 0.17 11.6 0.6 1.5 1 0 0 1 1 1 0 Neuropeptide-like GNAT_C PF18164.1 ORF73214 - 0.096 12.4 0.1 0.19 11.4 0.1 1.5 1 0 0 1 1 1 0 GNAT-like C-terminal domain APOBEC_N PF08210.11 ORF71588 - 0.11 12.4 0.1 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 APOBEC-like N-terminal domain HD_6 PF18019.1 ORF71553 - 0.13 12.4 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 HD domain Metallophos PF00149.28 ORF71213 - 2.2e-07 31.6 0.0 3.9e-07 30.8 0.0 1.4 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Prp31_C PF09785.9 ORF69401 - 4.5e-28 98.6 4.0 5.9e-28 98.2 4.0 1.2 1 0 0 1 1 1 1 Prp31 C terminal domain Hydrolase_4 PF12146.8 ORF68928 - 4.7e-14 52.2 0.0 6.5e-14 51.8 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF4796 PF16044.5 ORF64329 - 0.0091 15.6 0.3 0.0091 15.6 0.3 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4796) IL8 PF00048.20 ORF6407 - 0.074 13.2 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 Small cytokines (intecrine/chemokine), interleukin-8 like DUF3584 PF12128.8 ORF60855 - 0.64 7.5 23.2 0.76 7.2 23.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF5401 PF17380.2 ORF60855 - 0.9 7.5 29.6 1.1 7.3 29.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF1043 PF06295.12 ORF60855 - 2.2 8.3 19.1 7.5 6.6 19.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) PLA2_inh PF02988.15 ORF60519 - 0.97 10.1 5.6 2.7 8.7 2.8 2.1 1 1 1 2 2 2 0 Phospholipase A2 inhibitor Pkinase PF00069.25 ORF5972 - 2.1e-44 151.9 0.0 2.4e-44 151.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF5972 - 2.6e-21 76.1 0.0 2.7e-21 76.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF5972 - 6.9e-05 22.3 0.0 0.00014 21.2 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF5972 - 0.0012 17.7 0.0 0.0015 17.4 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF5972 - 0.0038 16.2 0.0 0.0047 15.9 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF5972 - 0.014 14.8 0.0 0.019 14.4 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF5972 - 0.03 14.2 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Exc PF07825.11 ORF57563 - 0.045 13.7 0.7 0.074 13.0 0.7 1.4 1 0 0 1 1 1 0 Excisionase-like protein Exc PF07825.11 ORF57449 - 0.045 13.7 0.7 0.074 13.0 0.7 1.4 1 0 0 1 1 1 0 Excisionase-like protein PARP PF00644.20 ORF5642 - 6.9e-17 61.7 0.0 1.1e-16 61.1 0.0 1.3 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain zf-MYND PF01753.18 ORF55131 - 0.06 13.4 1.6 0.14 12.3 1.6 1.6 1 0 0 1 1 1 0 MYND finger DUF5090 PF17009.5 ORF54024 - 0.029 14.3 4.8 0.038 14.0 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) TetR_C_31 PF17940.1 ORF51974 - 0.053 13.7 0.0 0.082 13.1 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF5090 PF17009.5 ORF50774 - 0.029 14.3 4.8 0.038 14.0 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF4576 PF15144.6 ORF50721 - 0.086 12.7 1.5 21 5.1 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4576) Fer4_14 PF13394.6 ORF50721 - 0.79 9.9 6.1 26 5.0 0.2 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain G10 PF01125.17 ORF50620 - 9.8e-61 203.8 11.6 1.1e-60 203.7 11.6 1.0 1 0 0 1 1 1 1 G10 protein Aldo_ket_red PF00248.21 ORF50379 - 2.8e-19 69.4 0.1 4.6e-19 68.7 0.1 1.3 1 1 0 1 1 1 1 Aldo/keto reductase family DUF192 PF02643.15 ORF48692 - 0.2 11.8 1.2 2.2 8.5 0.2 2.5 1 1 1 3 3 3 0 Uncharacterized ACR, COG1430 Efg1 PF10153.9 ORF46509 - 0.02 15.3 0.7 0.03 14.7 0.2 1.5 2 0 0 2 2 2 0 rRNA-processing protein Efg1 KRBA1 PF15287.6 ORF45994 - 0.0036 16.9 0.0 3.1 7.6 0.0 3.1 2 0 0 2 2 2 2 KRBA1 family repeat BatA PF07584.11 ORF45994 - 0.02 15.3 1.0 0.055 13.8 0.7 1.9 1 1 1 2 2 2 0 Aerotolerance regulator N-terminal HARP PF07443.13 ORF45994 - 0.13 11.9 0.0 24 4.7 0.0 2.6 3 0 0 3 3 3 0 HepA-related protein (HARP) Pup_ligase PF03136.15 ORF45492 - 0.02 13.9 0.0 0.02 13.9 0.0 1.2 1 0 0 1 1 1 0 Pup-ligase protein DUF3617 PF12276.8 ORF45492 - 0.08 13.3 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3617) Transformer PF06495.11 ORF45465 - 0.13 12.4 21.1 0.19 11.8 21.1 1.3 1 0 0 1 1 1 0 Fruit fly transformer protein CDC45 PF02724.14 ORF45465 - 1 7.6 10.9 0.99 7.6 10.9 1.2 1 0 0 1 1 1 0 CDC45-like protein Presenilin PF01080.17 ORF45465 - 2.5 6.8 4.2 2.5 6.7 4.2 1.1 1 0 0 1 1 1 0 Presenilin HycH PF07450.11 ORF44134 - 6.4e-56 188.2 0.0 7.3e-56 188.1 0.0 1.0 1 0 0 1 1 1 1 Formate hydrogenlyase maturation protein HycH Ribosomal_L17 PF01196.19 ORF43795 - 2.5e-22 79.6 0.0 3e-22 79.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L17 HTH_29 PF13551.6 ORF43274 - 0.36 10.9 1.0 6.8 6.8 0.1 2.4 2 0 0 2 2 2 0 Winged helix-turn helix PP2C PF00481.21 ORF42821 - 6.3e-18 65.3 0.0 7.3e-18 65.1 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoVAD PF07451.11 ORF42821 - 0.036 12.8 0.1 0.044 12.5 0.1 1.1 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) CSD PF00313.22 ORF42252 - 9.2e-18 63.9 0.2 9.2e-18 63.9 0.2 1.5 2 0 0 2 2 2 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF42252 - 0.024 14.3 0.6 0.045 13.4 0.6 1.5 1 0 0 1 1 1 0 Ribonuclease B OB domain Ank_4 PF13637.6 ORF41968 - 2e-08 34.6 0.0 4.8e-08 33.4 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF41968 - 1.2e-05 25.8 0.1 3.6e-05 24.3 0.1 1.8 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) ubiquitin PF00240.23 ORF41968 - 0.00019 21.1 0.0 0.00036 20.2 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin family Ank_5 PF13857.6 ORF41968 - 0.0042 17.4 0.3 0.18 12.1 0.1 2.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) DUF3597 PF12200.8 ORF41968 - 0.019 15.5 0.0 0.022 15.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3597) RPAP2_Rtr1 PF04181.13 ORF41968 - 0.064 13.6 0.0 0.15 12.4 0.0 1.9 1 1 0 1 1 1 0 Rtr1/RPAP2 family DUF1707 PF08044.11 ORF41968 - 0.13 12.4 0.3 0.13 12.4 0.3 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1707) BES1_N PF05687.13 ORF41267 - 0.009 16.4 0.3 0.011 16.1 0.3 1.1 1 0 0 1 1 1 1 BES1/BZR1 plant transcription factor, N-terminal DUF3013 PF11217.8 ORF40745 - 0.0056 16.6 0.9 1.8 8.4 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF3013) TGS PF02824.21 ORF40745 - 0.13 12.3 0.0 0.95 9.6 0.0 2.0 2 0 0 2 2 2 0 TGS domain Ribosomal_S8e PF01201.22 ORF39745 - 0.21 11.8 8.6 0.26 11.4 8.6 1.2 1 0 0 1 1 1 0 Ribosomal protein S8e RD3 PF14473.6 ORF39311 - 0.08 12.8 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 RD3 protein DUF4516 PF14990.6 ORF379 - 0.13 12.0 0.9 0.23 11.2 0.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) TMEM135_C_rich PF15982.5 ORF37860 - 0.029 15.0 0.6 0.038 14.6 0.6 1.1 1 0 0 1 1 1 0 N-terminal cysteine-rich region of Transmembrane protein 135 Ribosom_S12_S23 PF00164.25 ORF3668 - 4e-43 145.7 0.4 5.5e-43 145.2 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 TB2_DP1_HVA22 PF03134.19 ORF35366 - 0.00027 20.8 5.0 0.00027 20.8 5.0 1.9 1 1 1 2 2 2 1 TB2/DP1, HVA22 family PadR PF03551.14 ORF35366 - 0.066 13.2 0.1 0.22 11.5 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family Cullin_Nedd8 PF10557.9 ORF35366 - 0.11 12.6 2.9 0.19 11.8 0.5 2.1 2 0 0 2 2 2 0 Cullin protein neddylation domain DUF4750 PF15938.5 ORF34969 - 0.13 11.9 1.2 0.33 10.6 1.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4750) Glyco_hydro_5_C PF18564.1 ORF34473 - 2.2e-13 50.5 0.0 3e-13 50.1 0.0 1.2 1 0 0 1 1 1 1 Glycoside hydrolase family 5 C-terminal domain DUF898 PF05987.13 ORF34242 - 0.0022 17.1 0.0 0.0028 16.8 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF898) TMEM100 PF16311.5 ORF34242 - 0.018 14.6 0.5 0.057 13.0 0.1 1.9 1 1 1 2 2 2 0 Transmembrane protein 100 ABC_export PF16962.5 ORF34242 - 0.047 12.1 0.2 0.058 11.8 0.2 1.1 1 0 0 1 1 1 0 Putative ABC exporter CSG2 PF16965.5 ORF34242 - 0.063 12.2 0.0 0.069 12.1 0.0 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator EphA2_TM PF14575.6 ORF34242 - 0.064 14.1 0.2 2.1 9.3 0.0 2.2 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Neurensin PF14927.6 ORF34242 - 0.091 12.5 0.0 0.13 12.0 0.0 1.4 1 1 0 1 1 1 0 Neurensin TMEM190 PF15431.6 ORF34242 - 0.14 12.3 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 190 Pox_A14 PF05767.12 ORF34242 - 0.27 11.4 2.3 12 6.1 0.4 2.3 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 DHHC PF01529.20 ORF34089 - 0.027 14.6 0.5 0.043 13.9 0.5 1.4 1 0 0 1 1 1 0 DHHC palmitoyltransferase zf-P11 PF03854.14 ORF34089 - 0.09 12.5 0.4 0.09 12.5 0.4 2.0 2 0 0 2 2 2 0 P-11 zinc finger Ribosom_S12_S23 PF00164.25 ORF33782 - 4e-43 145.7 0.4 5.5e-43 145.2 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 KSHV_K1 PF11049.8 ORF32499 - 0.023 14.6 0.0 0.049 13.6 0.0 1.5 1 0 0 1 1 1 0 Glycoprotein K1 of Kaposi's sarcoma-associated herpes virus IL8 PF00048.20 ORF29768 - 0.074 13.2 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 Small cytokines (intecrine/chemokine), interleukin-8 like SPDY PF03771.16 ORF27791 - 0.12 12.3 0.0 0.12 12.3 0.0 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF317) DUF1431 PF07248.12 ORF27498 - 1.1 9.5 7.7 2.2 8.5 7.7 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1431) DUF4883 PF16224.5 ORF27077 - 0.19 12.0 2.4 2.5 8.4 0.3 2.1 2 0 0 2 2 2 0 DOmain of unknown function (DUF4883) UK PF02512.14 ORF27038 - 0.15 12.6 0.2 0.15 12.6 0.2 1.6 2 0 0 2 2 2 0 Virulence determinant DUF1340 PF07067.11 ORF19595 - 0.021 14.2 0.5 0.028 13.8 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1340) Synaptobrevin PF00957.21 ORF18345 - 3.4e-18 65.2 0.1 5.2e-18 64.6 0.1 1.3 1 0 0 1 1 1 1 Synaptobrevin DUF2721 PF11026.8 ORF18345 - 0.0049 16.8 0.3 0.0062 16.4 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2721) DUF4231 PF14015.6 ORF18345 - 0.0079 16.7 0.8 0.011 16.2 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4231) RskA PF10099.9 ORF18345 - 0.045 14.1 0.6 0.081 13.2 0.6 1.4 1 1 0 1 1 1 0 Anti-sigma-K factor rskA DUF4131 PF13567.6 ORF18345 - 0.045 13.4 0.2 0.064 12.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2207 PF09972.9 ORF18345 - 0.11 11.2 0.0 0.12 11.1 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Wzy_C PF04932.15 ORF18345 - 0.56 9.8 2.8 0.42 10.2 1.1 1.6 1 1 1 2 2 2 0 O-Antigen ligase BK_channel_a PF03493.18 ORF17679 - 1.8e-05 24.8 0.2 5.1e-05 23.4 0.0 1.8 2 0 0 2 2 2 1 Calcium-activated BK potassium channel alpha subunit RCDG1 PF15725.5 ORF16784 - 0.056 13.9 3.3 0.13 12.7 3.3 1.7 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein Pkinase PF00069.25 ORF152905 - 1.3e-05 24.7 0.0 1.8e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DFF40 PF09230.10 ORF152905 - 0.0078 15.8 0.4 0.9 9.1 0.1 2.2 2 0 0 2 2 2 2 DNA fragmentation factor 40 kDa AICARFT_IMPCHas PF01808.18 ORF152905 - 0.07 12.6 0.0 0.094 12.1 0.0 1.1 1 0 0 1 1 1 0 AICARFT/IMPCHase bienzyme Usp PF00582.26 ORF152503 - 2.5e-21 76.7 0.0 2.8e-21 76.5 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family TPP_enzyme_M PF00205.22 ORF152503 - 0.048 13.4 0.0 0.71 9.6 0.0 2.6 2 1 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain ETF PF01012.21 ORF152503 - 0.074 12.9 0.0 0.97 9.3 0.0 2.1 2 0 0 2 2 2 0 Electron transfer flavoprotein domain OmpA_membrane PF01389.17 ORF152503 - 0.18 11.5 0.0 0.37 10.5 0.0 1.4 1 1 0 1 1 1 0 OmpA-like transmembrane domain Papo_T_antigen PF02380.15 ORF150854 - 0.0063 16.6 2.4 0.0063 16.6 2.4 2.7 2 1 1 3 3 3 1 T-antigen specific domain Tom6 PF17112.5 ORF149111 - 5.6 6.6 8.8 6.5 6.3 0.4 3.4 4 0 0 4 4 4 0 Mitochondrial import receptor subunit Tom6, fungal LolA PF03548.15 ORF148289 - 0.04 13.6 0.0 0.05 13.3 0.0 1.3 1 0 0 1 1 1 0 Outer membrane lipoprotein carrier protein LolA Exc PF07825.11 ORF148155 - 0.045 13.7 0.7 0.074 13.0 0.7 1.4 1 0 0 1 1 1 0 Excisionase-like protein MerR_1 PF13411.6 ORF145105 - 3.3e-18 65.5 0.5 6.7e-18 64.5 0.0 1.7 2 0 0 2 2 2 1 MerR HTH family regulatory protein MerR PF00376.23 ORF145105 - 4.2e-16 58.4 0.1 8e-16 57.5 0.1 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR-DNA-bind PF09278.11 ORF145105 - 1.3e-15 57.7 2.5 2.3e-15 56.9 2.5 1.4 1 0 0 1 1 1 1 MerR, DNA binding Phytochelatin PF05023.14 ORF145105 - 0.015 14.5 0.0 0.018 14.2 0.0 1.1 1 0 0 1 1 1 0 Phytochelatin synthase Tup_N PF08581.10 ORF145105 - 0.02 15.2 0.6 1.4 9.3 0.1 2.2 2 0 0 2 2 2 0 Tup N-terminal DUF1836 PF08876.11 ORF145105 - 0.039 14.0 0.0 0.063 13.3 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1836) DUF2205 PF10224.9 ORF145105 - 0.12 12.4 0.5 0.21 11.6 0.5 1.4 1 0 0 1 1 1 0 Short coiled-coil protein Herpes_UL20 PF04544.12 ORF144132 - 0.039 14.3 0.4 0.055 13.8 0.4 1.1 1 0 0 1 1 1 0 Herpesvirus egress protein UL20 V4R PF02830.18 ORF143013 - 0.092 12.8 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 V4R domain Form_Nir_trans PF01226.17 ORF142461 - 1.9e-19 70.0 4.0 2.3e-19 69.7 4.0 1.1 1 0 0 1 1 1 1 Formate/nitrite transporter Hyd_WA PF06462.12 ORF141615 - 0.2 11.7 2.4 14 5.8 0.0 2.4 2 0 0 2 2 2 0 Propeller Agenet PF05641.12 ORF137548 - 0.19 12.2 0.1 0.51 10.8 0.0 1.7 1 1 1 2 2 2 0 Agenet domain DUF5090 PF17009.5 ORF137373 - 0.029 14.3 4.8 0.038 14.0 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) WAPL PF07814.13 ORF137249 - 0.0033 16.3 0.4 0.0049 15.7 0.4 1.3 1 0 0 1 1 1 1 Wings apart-like protein regulation of heterochromatin STAG PF08514.11 ORF137249 - 1.3 9.0 4.6 9.3 6.2 0.3 2.1 1 1 1 2 2 2 0 STAG domain DUF3432 PF11914.8 ORF13715 - 0.008 16.4 1.0 0.014 15.6 1.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3432) RD3 PF14473.6 ORF136673 - 0.08 12.8 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 RD3 protein DUF2240 PF09999.9 ORF136357 - 0.011 15.3 0.5 0.018 14.6 0.1 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) ubiquitin PF00240.23 ORF134899 - 0.14 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family TetR_C_31 PF17940.1 ORF133846 - 0.053 13.7 0.0 0.082 13.1 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Arf PF00025.21 ORF133006 - 1.2e-43 148.6 0.7 1.3e-43 148.5 0.7 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF133006 - 3.5e-17 62.4 0.1 4.3e-17 62.1 0.1 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF133006 - 9.5e-13 48.1 0.2 1.2e-12 47.8 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF133006 - 1.1e-11 45.0 0.0 1.5e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF133006 - 4.5e-10 39.6 0.1 5.9e-10 39.2 0.1 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF133006 - 1.6e-08 34.2 2.1 2.4e-06 27.0 0.4 2.5 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF133006 - 5.2e-05 22.7 0.3 6.9e-05 22.3 0.3 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF133006 - 0.0044 16.6 1.5 0.083 12.4 0.4 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AAA_14 PF13173.6 ORF133006 - 0.0066 16.5 0.1 0.024 14.7 0.0 1.7 1 1 1 2 2 2 1 AAA domain NACHT PF05729.12 ORF133006 - 0.02 14.8 0.0 0.95 9.4 0.0 2.1 2 0 0 2 2 2 0 NACHT domain FeoB_N PF02421.18 ORF133006 - 0.071 12.6 0.9 0.73 9.4 0.9 2.2 1 1 0 1 1 1 0 Ferrous iron transport protein B PduV-EutP PF10662.9 ORF133006 - 0.077 12.7 0.0 0.31 10.8 0.0 1.8 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NTPase_1 PF03266.15 ORF133006 - 0.1 12.5 1.2 0.95 9.4 1.0 2.0 1 1 1 2 2 2 0 NTPase MobB PF03205.14 ORF133006 - 0.1 12.5 0.1 0.15 11.9 0.1 1.5 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B FBPase_3 PF01950.16 ORF133006 - 0.13 11.5 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Fructose-1,6-bisphosphatase Mce4_CUP1 PF11887.8 ORF132990 - 0.03 13.8 0.0 0.041 13.3 0.0 1.1 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative HSA PF07529.13 ORF132990 - 0.034 14.5 2.7 0.034 14.5 2.7 2.0 2 1 0 2 2 2 0 HSA RAG2_PHD PF13341.6 ORF131084 - 0.061 13.4 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 RAG2 PHD domain ubiquitin PF00240.23 ORF129858 - 0.14 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family Ribosomal_L27A PF00828.19 ORF128428 - 1.5e-32 112.9 3.2 2e-32 112.5 3.2 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF128428 - 0.025 14.0 0.2 0.042 13.2 0.2 1.4 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e DUF2340 PF10209.9 ORF12740 - 0.011 16.2 1.5 0.017 15.6 1.4 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2340) ESP PF16590.5 ORF12740 - 0.61 10.4 4.3 0.58 10.5 0.8 2.2 1 1 1 2 2 2 0 Exocrine gland-secreting peptide TPR_12 PF13424.6 ORF12573 - 1.3e-14 54.2 20.8 3.3e-08 33.7 4.0 2.5 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF12573 - 1.5e-09 37.4 8.8 0.0011 18.8 0.6 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF12573 - 5e-08 32.4 4.8 0.011 15.7 0.2 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_4 PF07721.14 ORF12573 - 1.9e-06 27.9 10.2 0.0094 16.5 0.8 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF12573 - 7.3e-05 22.6 8.3 0.1 12.8 0.4 3.4 4 0 0 4 4 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF12573 - 0.00015 21.7 2.0 1.1 9.6 0.1 3.6 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF12573 - 0.00018 21.2 2.4 0.94 9.4 0.1 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF12573 - 0.00027 21.4 11.5 0.0062 17.0 1.0 3.3 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF12573 - 0.00053 20.6 8.6 0.2 12.5 1.2 2.9 1 1 2 3 3 3 2 Tetratricopeptide repeat Wzy_C_2 PF11846.8 ORF12573 - 0.0045 16.9 0.6 2.5 8.0 0.2 2.2 1 1 1 2 2 2 2 Virulence factor membrane-bound polymerase, C-terminal TPR_17 PF13431.6 ORF12573 - 0.0095 16.2 2.4 28 5.4 0.1 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat SNAP PF14938.6 ORF12573 - 0.034 13.6 0.3 0.044 13.2 0.3 1.2 1 0 0 1 1 1 0 Soluble NSF attachment protein, SNAP TPR_6 PF13174.6 ORF12573 - 0.053 14.2 5.5 10 7.0 0.3 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF12573 - 0.066 13.9 10.7 0.1 13.3 8.6 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat Ac76 PF05814.11 ORF124520 - 0.049 13.6 0.8 3.7 7.6 0.1 2.3 2 0 0 2 2 2 0 Orf76 (Ac76) DUF4064 PF13273.6 ORF124520 - 0.056 13.7 0.2 0.14 12.5 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) Ninjurin PF04923.12 ORF124520 - 0.14 12.1 4.9 0.15 12.0 0.3 2.1 1 1 1 2 2 2 0 Ninjurin DUF4446 PF14584.6 ORF124520 - 0.42 10.6 3.5 1.3 9.0 1.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) EphA2_TM PF14575.6 ORF124520 - 7.8 7.4 5.9 1.3e+02 3.6 5.9 2.2 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Glyco_hydro_42C PF08533.10 ORF120473 - 0.059 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain UPF0225 PF17775.1 ORF119849 - 0.0043 17.8 0.5 0.012 16.4 0.5 1.7 1 1 0 1 1 1 1 UPF0225 domain OCRE PF17780.1 ORF11904 - 0.18 11.9 2.2 0.31 11.1 2.2 1.4 1 0 0 1 1 1 0 OCRE domain Ribosom_S12_S23 PF00164.25 ORF11839 - 4e-43 145.7 0.4 5.5e-43 145.2 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 DUF5090 PF17009.5 ORF11712 - 0.029 14.3 4.8 0.038 14.0 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF4171 PF13775.6 ORF114945 - 4.5 7.7 11.8 0.28 11.6 1.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4171) MORN PF02493.20 ORF111625 - 5.4e-33 110.9 39.7 6.2e-09 35.2 2.2 7.0 7 0 0 7 7 7 6 MORN repeat DUF3048_C PF17479.2 ORF111625 - 0.098 13.1 6.7 0.15 12.4 2.4 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain SART-1 PF03343.13 ORF111579 - 5.2e-11 41.8 13.1 6.1e-11 41.6 13.1 1.0 1 0 0 1 1 1 1 SART-1 family PHD20L1_u1 PF16660.5 ORF111579 - 0.026 15.3 0.0 0.047 14.4 0.0 1.5 1 1 0 1 1 1 0 PHD finger protein 20-like protein 1 DUF1068 PF06364.12 ORF110664 - 0.62 9.9 5.7 0.82 9.5 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) MORN PF02493.20 ORF110313 - 1.5e-12 46.6 14.4 2.4e-07 30.2 0.6 3.3 3 0 0 3 3 3 2 MORN repeat Smg8_Smg9 PF10220.9 ORF110313 - 0.075 11.3 1.3 0.082 11.2 1.3 1.0 1 0 0 1 1 1 0 Smg8_Smg9 DUF5619 PF18505.1 ORF107296 - 0.23 11.5 0.6 3.2 7.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5619) GMP_PDE_delta PF05351.11 ORF106744 - 0.034 14.2 2.3 0.045 13.8 2.3 1.2 1 0 0 1 1 1 0 GMP-PDE, delta subunit OrgA_MxiK PF09482.10 ORF106046 - 0.038 13.9 0.2 0.048 13.5 0.2 1.2 1 0 0 1 1 1 0 Bacterial type III secretion apparatus protein (OrgA_MxiK) RNA_pol_L_2 PF13656.6 ORF10516 - 2.7e-29 100.7 0.1 3.9e-29 100.2 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 ORF10516 - 7.4e-08 31.7 0.0 1.2e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain GAS PF13851.6 ORF10516 - 0.05 12.9 1.8 0.15 11.4 0.3 1.9 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3304 PF11745.8 ORF10516 - 0.078 13.4 0.0 0.22 11.9 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3304) C8 PF08742.11 ORF104008 - 0.085 13.3 1.5 0.085 13.3 1.5 1.9 2 0 0 2 2 2 0 C8 domain DUF4713 PF15831.5 ORF103766 - 2 8.9 13.2 8.2 7.0 8.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4713) DUF1828 PF08861.10 ORF102287 - 0.064 13.5 0.8 0.15 12.4 0.6 1.7 1 1 1 2 2 2 0 Domain of unknown function DUF1828 Ribosomal_S12 PF17487.2 ORF102186 - 3.9 8.3 10.9 0.28 11.9 3.6 2.1 1 1 1 2 2 2 0 Ribosomal protein S12 Pkinase PF00069.25 ORF101820 - 2.1e-44 151.9 0.0 2.4e-44 151.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101820 - 2.6e-21 76.1 0.0 2.7e-21 76.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF101820 - 6.9e-05 22.3 0.0 0.00014 21.2 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF101820 - 0.0012 17.7 0.0 0.0015 17.4 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF101820 - 0.0038 16.2 0.0 0.0047 15.9 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF101820 - 0.014 14.8 0.0 0.019 14.4 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF101820 - 0.03 14.2 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family EF-hand_7 PF13499.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.00054 20.4 0.3 0.0014 19.0 0.2 1.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.00094 19.0 1.2 0.0014 18.4 0.1 1.9 3 0 0 3 3 3 1 EF-hand domain pair DUF4483 PF14825.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.0043 16.8 0.2 0.0054 16.5 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4483) EF-hand_6 PF13405.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.034 14.1 0.1 0.16 12.0 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain GYF_2 PF14237.6 NODE_45755_length_427_cov_1.982143_g37965_i0forward_frame_1 - 0.19 11.5 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 GYF domain 2 PyrBI_leader PF08052.11 NODE_45739_length_427_cov_4.933673_g37949_i0reverse_frame_1 - 0.02 14.9 0.4 0.83 9.7 0.0 2.6 1 1 1 2 2 2 0 PyrBI operon leader peptide Vma12 PF11712.8 NODE_45714_length_427_cov_128.780612_g37925_i0forward_frame_1 - 0.077 13.1 2.1 0.13 12.3 2.1 1.4 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase EF-hand_5 PF13202.6 NODE_45707_length_427_cov_290.002551_g37919_i0forward_frame_1 - 1e-18 65.9 2.9 1.6e-06 27.4 0.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_1 PF00036.32 NODE_45707_length_427_cov_290.002551_g37919_i0forward_frame_1 - 2.8e-17 60.9 0.6 0.00076 18.9 0.0 4.6 4 1 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 NODE_45707_length_427_cov_290.002551_g37919_i0forward_frame_1 - 1.2e-15 57.7 0.2 2.4e-06 27.9 0.1 2.6 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_45707_length_427_cov_290.002551_g37919_i0forward_frame_1 - 4.3e-14 51.2 0.7 0.0098 15.8 0.1 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 NODE_45707_length_427_cov_290.002551_g37919_i0forward_frame_1 - 2.7e-11 43.2 0.6 0.0033 17.2 0.2 4.5 3 2 1 4 4 4 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 NODE_45707_length_427_cov_290.002551_g37919_i0forward_frame_1 - 5.8e-06 26.6 0.0 0.026 14.8 0.0 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 NODE_45707_length_427_cov_290.002551_g37919_i0forward_frame_1 - 0.039 14.2 1.7 0.55 10.5 0.5 2.8 1 1 1 2 2 2 0 Dockerin type I domain PMBR PF09373.10 NODE_45707_length_427_cov_290.002551_g37919_i0forward_frame_1 - 0.07 13.3 0.0 0.69 10.2 0.0 2.2 2 0 0 2 2 2 0 Pseudomurein-binding repeat Peptidase_S28 PF05577.12 NODE_45704_length_427_cov_1398.397959_g37916_i0forward_frame_1 - 0.024 13.5 3.3 0.028 13.2 3.3 1.0 1 0 0 1 1 1 0 Serine carboxypeptidase S28 DUF3575 PF12099.8 NODE_45690_length_428_cov_2.195929_g37906_i0forward_frame_1 - 0.031 13.6 0.1 0.044 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3575) SCAN PF02023.17 NODE_45689_length_428_cov_2.198473_g37905_i0reverse_frame_1 - 0.44 10.4 2.4 1.4 8.8 0.4 2.3 2 0 0 2 2 2 0 SCAN domain DUF2689 PF10894.8 NODE_45679_length_428_cov_3.213740_g37895_i0reverse_frame_1 - 0.19 11.5 1.3 7 6.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2689) Cytochrom_B_C PF00032.17 NODE_45672_length_428_cov_47.050891_g37888_i0reverse_frame_1 - 0.49 10.7 4.1 2.9 8.2 3.8 2.0 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD NTF-like PF14540.6 NODE_45672_length_428_cov_47.050891_g37888_i0forward_frame_1 - 0.058 13.2 0.3 0.088 12.6 0.3 1.2 1 0 0 1 1 1 0 Nucleotidyltransferase-like MNSV_P7B PF06692.11 NODE_45672_length_428_cov_47.050891_g37888_i0forward_frame_1 - 0.059 13.4 1.6 0.059 13.4 1.6 2.8 2 2 0 3 3 3 0 Melon necrotic spot virus P7B protein RCC1_2 PF13540.6 NODE_45659_length_428_cov_88.165394_g37875_i0forward_frame_1 - 6e-05 22.7 8.5 0.34 10.8 0.1 4.2 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat BacteriocIIc_cy PF12173.8 NODE_45659_length_428_cov_88.165394_g37875_i0forward_frame_1 - 0.41 10.9 8.7 6.3 7.1 0.6 3.0 1 1 2 3 3 3 0 Bacteriocin class IIc cyclic gassericin A-like Kelch_1 PF01344.25 NODE_45648_length_428_cov_121.857506_g37864_i0forward_frame_1 - 2.7e-05 23.7 0.0 0.00011 21.7 0.0 1.9 2 0 0 2 2 2 1 Kelch motif Kelch_2 PF07646.15 NODE_45648_length_428_cov_121.857506_g37864_i0forward_frame_1 - 0.00088 19.2 0.0 0.0033 17.4 0.0 1.9 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 NODE_45648_length_428_cov_121.857506_g37864_i0forward_frame_1 - 0.0084 16.4 0.6 0.12 12.7 0.0 2.7 1 1 1 2 2 2 1 Kelch motif Mustang PF15682.5 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_1 - 0.0077 16.3 0.1 0.011 15.8 0.1 1.2 1 0 0 1 1 1 1 Musculoskeletal, temporally activated-embryonic nuclear protein 1 PBP1_TM PF14812.6 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_1 - 0.065 13.6 1.2 0.094 13.1 1.2 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Thy1 PF02511.15 NODE_45632_length_428_cov_2362.407125_g37848_i0forward_frame_1 - 0.069 13.0 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 Thymidylate synthase complementing protein BofA PF07441.11 NODE_45627_length_428_cov_2782.000000_g36700_i2forward_frame_1 - 3.2 8.0 12.2 0.5 10.6 2.4 2.2 2 0 0 2 2 2 0 SigmaK-factor processing regulatory protein BofA ATP-synt_F PF01990.17 NODE_45624_length_428_cov_34713.552163_g37842_i0forward_frame_1 - 7.3e-28 96.7 0.6 9.8e-28 96.3 0.6 1.2 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit AI-2E_transport PF01594.16 NODE_45619_length_429_cov_1.911168_g37837_i0forward_frame_1 - 0.071 12.3 0.2 0.093 11.9 0.2 1.1 1 0 0 1 1 1 0 AI-2E family transporter EF-hand_8 PF13833.6 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 1.6e-08 34.2 1.6 3.3e-08 33.3 1.6 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 1.9e-07 30.1 1.6 3.3e-07 29.4 0.5 2.0 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 5e-05 22.9 1.0 0.00022 20.9 0.1 2.2 2 1 0 2 2 2 1 EF-hand domain EF-hand_4 PF12763.7 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 0.00013 21.8 0.7 0.00028 20.8 0.7 1.6 1 1 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_5 PF13202.6 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 0.00014 21.2 0.4 0.00028 20.3 0.4 1.5 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 NODE_45594_length_429_cov_47.068528_g37812_i0forward_frame_1 - 0.00062 20.2 2.4 0.0013 19.2 2.4 1.6 1 1 0 1 1 1 1 EF-hand domain pair FYVE_2 PF02318.16 NODE_45590_length_429_cov_53.680203_g37808_i0forward_frame_1 - 0.88 9.8 6.1 1.6 9.0 0.6 2.2 2 0 0 2 2 2 0 FYVE-type zinc finger Methyltransf_21 PF05050.12 NODE_45584_length_429_cov_74.076142_g37802_i0forward_frame_1 - 0.002 18.2 0.0 0.0029 17.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain OrsD PF12013.8 NODE_45576_length_429_cov_101.923858_g37794_i0forward_frame_1 - 2.5 8.6 5.5 1.3 9.4 0.3 2.1 1 1 1 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D YajC PF02699.15 NODE_45572_length_429_cov_153.908629_g37790_i0reverse_frame_1 - 4.2 7.3 5.7 0.64 9.9 1.9 1.6 2 0 0 2 2 2 0 Preprotein translocase subunit DUF809 PF05663.11 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_1 - 3.7 7.7 5.6 5.7 7.1 5.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) DUF2671 PF10877.8 NODE_45560_length_429_cov_2774.949239_g36700_i1forward_frame_1 - 0.021 14.6 0.7 0.048 13.5 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) Glyco_hydro_59 PF02057.15 NODE_45553_length_430_cov_1.769620_g37775_i0reverse_frame_3 - 0.0013 18.0 0.1 0.0015 17.9 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 59 Pkinase_fungal PF17667.1 NODE_45551_length_430_cov_1.898734_g37773_i0forward_frame_2 - 0.0041 16.0 0.1 0.0049 15.7 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase Pilosulin PF17499.2 NODE_45541_length_430_cov_2.645570_g37763_i0forward_frame_3 - 0.55 10.4 2.8 2.4 8.4 0.1 2.1 2 0 0 2 2 2 0 Ant venom peptides zf_PR_Knuckle PF18445.1 NODE_45536_length_430_cov_5.293671_g37758_i0forward_frame_3 - 0.067 13.0 0.0 0.18 11.7 0.0 1.8 1 0 0 1 1 1 0 PR zinc knuckle motif OKR_DC_1 PF01276.20 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 0.031 13.0 2.0 0.036 12.8 2.0 1.0 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain FAA_hydro_N_2 PF18288.1 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 0.039 14.4 1.1 0.066 13.6 0.2 1.8 2 0 0 2 2 2 0 Fumarylacetoacetase N-terminal domain 2 MRFAP1 PF15155.6 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 0.12 12.9 3.8 0.14 12.7 3.1 1.3 1 1 0 1 1 1 0 MORF4 family-associated protein1 Nup54 PF13874.6 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 0.81 9.8 11.7 4.6 7.4 11.7 2.0 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 Plk4_PB2 PF18409.1 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 1 10.1 7.6 0.55 11.0 2.2 2.1 1 1 0 2 2 2 0 Polo-like Kinase 4 Polo Box 2 DUF1664 PF07889.12 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_3 - 7 6.7 14.2 0.35 10.9 4.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Sds3 PF08598.11 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_2 - 0.092 12.7 12.1 0.11 12.5 12.1 1.2 1 0 0 1 1 1 0 Sds3-like PIN_12 PF16289.5 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_2 - 0.25 11.8 8.5 0.29 11.6 8.5 1.1 1 0 0 1 1 1 0 PIN domain Spore_III_AF PF09581.10 NODE_45533_length_430_cov_34.959494_g37755_i0forward_frame_2 - 0.3 11.1 7.1 0.32 11.0 7.1 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Chi-conotoxin PF16981.5 NODE_45532_length_430_cov_35.136709_g37754_i0reverse_frame_3 - 0.1 12.9 2.2 0.21 11.8 2.2 1.6 1 0 0 1 1 1 0 chi-Conotoxin or t superfamily RAMP4 PF06624.12 NODE_45532_length_430_cov_35.136709_g37754_i0forward_frame_3 - 0.0042 17.1 3.3 0.0098 15.9 3.3 1.6 1 0 0 1 1 1 1 Ribosome associated membrane protein RAMP4 PLN_propep PF16485.5 NODE_45530_length_430_cov_48.382278_g37752_i0reverse_frame_2 - 0.057 13.1 0.2 0.12 12.1 0.2 1.6 1 0 0 1 1 1 0 Protealysin propeptide Cyt_c_ox_IV PF12270.8 NODE_45530_length_430_cov_48.382278_g37752_i0forward_frame_3 - 0.065 13.4 0.2 0.15 12.2 0.2 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV TFIIE_alpha PF02002.17 NODE_45528_length_430_cov_58.202532_g37750_i0reverse_frame_3 - 0.11 12.4 0.1 0.84 9.5 0.0 1.9 2 0 0 2 2 2 0 TFIIE alpha subunit Thioredoxin PF00085.20 NODE_45528_length_430_cov_58.202532_g37750_i0reverse_frame_2 - 1.4e-07 31.4 0.1 2.9e-07 30.4 0.1 1.5 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 NODE_45528_length_430_cov_58.202532_g37750_i0reverse_frame_2 - 0.0049 17.2 0.1 0.015 15.7 0.0 1.8 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_7 PF13899.6 NODE_45528_length_430_cov_58.202532_g37750_i0reverse_frame_2 - 0.01 16.0 0.1 0.018 15.2 0.1 1.4 1 0 0 1 1 1 0 Thioredoxin-like Gp45_2 PF17470.2 NODE_45528_length_430_cov_58.202532_g37750_i0reverse_frame_2 - 0.064 13.2 0.0 0.16 11.9 0.0 1.7 1 0 0 1 1 1 0 Phage gene product 45.2 DUF1604 PF07713.13 NODE_45526_length_430_cov_68.329114_g37748_i0reverse_frame_2 - 0.11 12.4 0.3 0.16 11.8 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) WHEP-TRS PF00458.20 NODE_45514_length_430_cov_112.531646_g37736_i0reverse_frame_2 - 0.074 13.2 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 WHEP-TRS domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks179.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks179.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks179.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks179.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:31 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Copine PF07002.16 ORF103542 - 1.9e-66 223.7 0.0 2.7e-66 223.1 0.0 1.2 1 0 0 1 1 1 1 Copine C2 PF00168.30 ORF103542 - 3.9e-18 65.7 0.2 7.9e-13 48.6 0.0 2.5 2 0 0 2 2 2 2 C2 domain vWA-TerF-like PF10138.9 ORF103542 - 9.1e-07 29.2 0.0 1.6e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 vWA found in TerF C terminus VWA_3 PF13768.6 ORF103542 - 0.057 13.4 0.0 2.3 8.1 0.0 2.4 2 0 0 2 2 2 0 von Willebrand factor type A domain BPD_transp_1 PF00528.22 ORF98674 - 8.2e-16 58.3 35.5 3.3e-11 43.3 9.6 3.5 2 2 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component DUF2275 PF10039.9 ORF98674 - 0.8 9.8 3.3 13 5.9 0.4 2.7 3 0 0 3 3 3 0 Predicted integral membrane protein (DUF2275) Atthog PF18800.1 ORF98674 - 2 8.3 7.3 0.22 11.4 0.5 2.7 2 1 0 2 2 2 0 Attenuator of Hedgehog OSTbeta PF15048.6 ORF98674 - 2.7 8.2 4.0 2.8 8.1 0.0 2.8 2 1 1 3 3 3 0 Organic solute transporter subunit beta protein Ferric_reduct PF01794.19 ORF67320 - 9.8e-08 32.2 17.6 6.2e-07 29.6 9.9 2.7 2 0 0 2 2 2 2 Ferric reductase like transmembrane component NAD_binding_6 PF08030.12 ORF67320 - 2.8e-07 30.8 0.1 0.016 15.3 0.1 2.4 2 0 0 2 2 2 2 Ferric reductase NAD binding domain NAD_binding_1 PF00175.21 ORF67320 - 0.052 14.2 0.0 0.28 11.9 0.0 2.0 2 0 0 2 2 2 0 Oxidoreductase NAD-binding domain Ferric_reduct PF01794.19 ORF28265 - 9.8e-08 32.2 17.6 6.2e-07 29.6 9.9 2.7 2 0 0 2 2 2 2 Ferric reductase like transmembrane component NAD_binding_6 PF08030.12 ORF28265 - 2.8e-07 30.8 0.1 0.016 15.3 0.1 2.4 2 0 0 2 2 2 2 Ferric reductase NAD binding domain NAD_binding_1 PF00175.21 ORF28265 - 0.052 14.2 0.0 0.28 11.9 0.0 2.0 2 0 0 2 2 2 0 Oxidoreductase NAD-binding domain EF-hand_7 PF13499.6 ORF147836 - 1e-11 45.1 0.5 2e-11 44.2 0.5 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF147836 - 7.8e-11 40.7 0.1 9.1e-06 24.9 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF147836 - 5.6e-08 32.1 0.3 0.0019 18.0 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF147836 - 5.5e-05 22.9 1.3 0.001 18.9 0.8 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF147836 - 0.0079 16.1 0.2 0.023 14.6 0.1 1.7 1 1 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Sulfatase PF00884.23 ORF146930 - 4.8e-35 121.4 0.1 6.4e-35 121.0 0.1 1.2 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF146930 - 0.004 16.8 0.0 0.0088 15.7 0.0 1.5 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase GCS2 PF04107.13 ORF146930 - 0.031 13.6 0.0 0.076 12.3 0.0 1.6 2 0 0 2 2 2 0 Glutamate-cysteine ligase family 2(GCS2) DUF4976 PF16347.5 ORF146930 - 0.17 12.2 1.4 0.19 12.0 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4976) SSF PF00474.17 ORF1430 - 2.5e-140 467.9 38.5 3.6e-140 467.4 38.5 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family DUF2818 PF10993.8 ORF1430 - 0.095 13.3 0.0 0.095 13.3 0.0 4.2 4 1 0 4 4 4 0 Protein of unknown function (DUF2818) SPC12 PF06645.13 ORF1430 - 0.12 12.5 0.2 0.12 12.5 0.2 4.6 6 0 0 6 6 6 0 Microsomal signal peptidase 12 kDa subunit (SPC12) TauE PF01925.19 ORF141429 - 1.1e-25 90.7 20.6 1.9e-13 50.6 15.9 2.2 2 0 0 2 2 2 2 Sulfite exporter TauE/SafE DUF2304 PF10066.9 ORF141429 - 0.045 14.0 0.3 0.045 14.0 0.3 4.3 5 1 0 5 5 5 0 Uncharacterized conserved protein (DUF2304) PGI PF00342.19 ORF139151 - 8.5e-259 859.0 0.1 9.7e-259 858.8 0.1 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase FAST_1 PF06743.15 ORF100962 - 5.6e-06 26.2 0.0 0.042 13.8 0.0 5.5 4 2 1 6 6 6 2 FAST kinase-like protein, subdomain 1 NnrU PF07298.11 ORF99461 - 0.014 14.9 2.2 0.065 12.7 0.3 2.4 2 0 0 2 2 2 0 NnrU protein LPAM_1 PF08139.12 ORF90767 - 0.1 13.1 1.0 0.16 12.5 1.0 1.3 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Ion_trans PF00520.31 ORF80854 - 2.3e-07 30.3 14.8 2.3e-07 30.3 14.8 2.3 2 1 0 2 2 2 1 Ion transport protein PKD_channel PF08016.12 ORF80854 - 8.6e-07 28.0 9.2 8.6e-07 28.0 9.2 1.6 2 0 0 2 2 2 1 Polycystin cation channel Cadherin_C_2 PF16492.5 ORF80854 - 0.032 15.0 0.9 0.84 10.4 0.1 2.7 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal Retrotrans_gag PF03732.17 ORF80854 - 0.079 13.2 0.7 0.3 11.4 0.2 2.2 2 0 0 2 2 2 0 Retrotransposon gag protein DUF4446 PF14584.6 ORF80854 - 0.087 12.8 0.3 0.087 12.8 0.3 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF4446) DUF5313 PF17240.2 ORF80854 - 0.12 12.8 0.3 0.12 12.8 0.3 2.2 3 0 0 3 3 3 0 Family of unknown function (DUF5313) Vma12 PF11712.8 ORF80854 - 0.31 11.1 0.0 0.31 11.1 0.0 2.7 3 1 0 3 3 3 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF4834 PF16118.5 ORF80854 - 1.1 10.3 0.0 1.1 10.3 0.0 3.1 4 0 0 4 4 4 0 Domain of unknown function (DUF4834) DnaJ PF00226.31 ORF54642 - 3.5e-10 39.8 0.0 2.4e-09 37.2 0.0 2.3 2 0 0 2 2 2 1 DnaJ domain DUF2477 PF10631.9 ORF54642 - 1.6 9.4 3.9 4.4 8.0 0.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2477) RNA_pol_Rpb2_6 PF00562.28 ORF38259 - 5.8e-107 358.1 0.1 9.5e-106 354.1 0.1 2.0 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 ORF38259 - 7.3e-17 61.5 0.0 1.6e-16 60.5 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 zf-Sec23_Sec24 PF04810.15 ORF38259 - 0.075 13.1 0.9 0.21 11.7 0.1 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger DZR PF12773.7 ORF38259 - 0.1 12.6 1.3 0.24 11.4 1.3 1.6 1 0 0 1 1 1 0 Double zinc ribbon Zn_ribbon_SprT PF17283.2 ORF38259 - 0.12 12.3 4.2 6 6.9 0.0 2.6 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-ribbon_3 PF13248.6 ORF38259 - 0.16 11.5 1.1 0.23 10.9 0.1 1.8 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_recom PF13408.6 ORF38259 - 0.79 10.3 3.3 0.87 10.2 1.0 2.2 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain TRP PF06011.12 ORF147812 - 2.3e-05 23.3 22.6 4.5e-05 22.4 7.2 2.9 2 1 1 3 3 3 3 Transient receptor potential (TRP) ion channel PDR_assoc PF08370.11 ORF147812 - 0.15 11.8 2.2 0.22 11.3 0.5 2.2 2 0 0 2 2 2 0 Plant PDR ABC transporter associated Fumerase_C PF05683.12 ORF11115 - 8.3e-89 296.3 0.0 1.6e-88 295.4 0.0 1.5 1 0 0 1 1 1 1 Fumarase C-terminus Fumerase PF05681.14 ORF11115 - 2.4e-88 296.1 0.0 3.1e-88 295.7 0.0 1.1 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) Lipase_3 PF01764.25 ORF109202 - 1e-09 38.4 0.0 1.8e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) PH PF00169.29 ORF109202 - 0.013 15.9 0.1 4.3 7.9 0.0 2.3 2 0 0 2 2 2 0 PH domain Tweety PF04906.13 ORF101528 - 5.8e-07 28.5 2.6 5.8e-07 28.5 2.6 2.0 2 1 0 2 2 2 1 Tweety DivIC PF04977.15 ORF101528 - 0.0043 16.8 0.1 0.012 15.4 0.1 1.8 1 0 0 1 1 1 1 Septum formation initiator betaPIX_CC PF16523.5 ORF101528 - 0.068 13.0 0.4 0.16 11.8 0.4 1.5 1 0 0 1 1 1 0 betaPIX coiled coil ZapB PF06005.12 ORF101528 - 0.12 12.9 1.1 0.28 11.6 1.1 1.6 1 0 0 1 1 1 0 Cell division protein ZapB MHC2-interact PF09307.10 ORF101528 - 0.14 12.2 0.9 0.64 10.0 0.0 2.2 2 0 0 2 2 2 0 CLIP, MHC2 interacting YscO PF07321.12 ORF101528 - 0.23 11.4 2.8 0.23 11.4 0.7 1.9 2 0 0 2 2 2 0 Type III secretion protein YscO Tetraspanin PF00335.20 ORF101528 - 0.24 11.1 3.4 3.4 7.3 0.1 2.7 2 2 0 2 2 2 0 Tetraspanin family DUF3450 PF11932.8 ORF101528 - 0.43 9.8 3.2 0.34 10.2 0.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Jiraiya PF15038.6 ORF101528 - 4.6 6.6 8.5 4.6 6.6 0.1 2.4 2 0 0 2 2 2 0 Jiraiya C2 PF00168.30 ORF99816 - 4.8e-17 62.1 0.0 9.1e-17 61.2 0.0 1.4 1 0 0 1 1 1 1 C2 domain PHA_synth_III_E PF09712.10 ORF99816 - 0.084 12.0 0.2 0.12 11.4 0.2 1.2 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) RRM_1 PF00076.22 ORF94703 - 6.3e-18 64.4 0.0 0.00012 21.9 0.0 3.5 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Calcipressin PF04847.12 ORF94703 - 0.0001 22.1 0.9 0.082 12.6 0.0 3.1 3 0 0 3 3 3 2 Calcipressin CP12 PF02672.15 ORF94703 - 1.5 9.6 4.2 39 5.1 0.0 3.1 4 0 0 4 4 4 0 CP12 domain DUF896 PF05979.12 ORF94703 - 3.8 7.5 6.0 6.9 6.6 0.1 2.9 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF896) Asp PF00026.23 ORF86499 - 6.2e-21 75.1 0.5 9.4e-21 74.5 0.5 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF86499 - 0.0092 15.8 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal NS3_envE PF02723.14 ORF86499 - 4.4 7.5 7.8 68 3.6 5.3 2.4 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E KxDL PF10241.9 ORF77902 - 6.4e-05 23.2 2.0 6.4e-05 23.2 2.0 5.1 5 0 0 5 5 5 2 Uncharacterized conserved protein Osmo_CC PF08946.10 ORF77902 - 0.00034 20.8 16.2 0.087 13.1 1.9 4.9 4 0 0 4 4 4 3 Osmosensory transporter coiled coil TMF_DNA_bd PF12329.8 ORF77902 - 0.0016 18.4 10.3 0.0016 18.4 10.3 7.3 5 3 2 7 7 7 1 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 ORF77902 - 0.4 11.0 14.1 12 6.2 3.3 5.1 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DASH_Dam1 PF08653.10 ORF77902 - 0.7 9.7 8.0 4.9 7.0 0.0 4.5 4 1 1 5 5 5 0 DASH complex subunit Dam1 MCPsignal PF00015.21 ORF77902 - 1.6 8.5 16.3 2.6 7.8 0.0 4.6 3 1 2 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF2209 PF09974.9 ORF77902 - 3.9 7.8 8.3 0.28 11.5 0.6 2.8 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2209) Asp PF00026.23 ORF5799 - 6.2e-21 75.1 0.5 9.4e-21 74.5 0.5 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF5799 - 0.0092 15.8 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal NS3_envE PF02723.14 ORF5799 - 4.4 7.5 7.8 68 3.6 5.3 2.4 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E Asp PF00026.23 ORF42811 - 6.2e-21 75.1 0.5 9.4e-21 74.5 0.5 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF42811 - 0.0092 15.8 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal NS3_envE PF02723.14 ORF42811 - 4.4 7.5 7.8 68 3.6 5.3 2.4 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E LRR_4 PF12799.7 ORF3027 - 0.00055 20.3 35.6 0.024 15.0 0.2 8.3 5 3 4 9 9 9 4 Leucine Rich repeats (2 copies) Alg14 PF08660.11 ORF3027 - 0.093 12.7 0.1 58 3.6 0.0 3.2 3 0 0 3 3 3 0 Oligosaccharide biosynthesis protein Alg14 like Apolipoprotein PF01442.18 ORF131076 - 0.0068 16.3 2.8 0.0068 16.3 2.8 2.9 2 1 1 3 3 3 1 Apolipoprotein A1/A4/E domain Serpentine_r_xa PF03383.15 ORF131076 - 0.081 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Caenorhabditis serpentine receptor-like protein, class xa DUF3921 PF13060.6 ORF131076 - 0.26 11.3 5.4 2.4 8.3 0.5 3.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3921) PIN_8 PF18476.1 ORF131076 - 1 9.2 46.0 1.4 8.7 10.7 3.9 1 1 2 4 4 4 0 PIN like domain Prominin PF05478.11 ORF131076 - 1.1 7.1 28.4 1.7 6.5 3.4 2.5 2 0 0 2 2 2 0 Prominin TipAS PF07739.13 ORF131076 - 4.1 8.0 33.1 4.9 7.7 7.3 5.3 2 2 2 4 4 4 0 TipAS antibiotic-recognition domain YtxH PF12732.7 ORF131076 - 9.3 6.9 43.7 1.1 9.9 5.2 6.1 2 2 1 3 3 3 0 YtxH-like protein Na_sulph_symp PF00939.19 ORF128869 - 2.3e-58 198.4 27.4 3.1e-58 198.0 27.4 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 ORF128869 - 1.8e-34 119.3 13.5 1.8e-34 119.3 13.5 2.2 1 1 1 2 2 2 2 Citrate transporter DctM PF06808.12 ORF128869 - 0.18 10.6 28.7 0.0073 15.2 10.5 2.6 2 1 0 2 2 2 0 Tripartite ATP-independent periplasmic transporter, DctM component Lipoxygenase PF00305.19 ORF125473 - 0.0002 19.9 0.0 0.0002 19.9 0.0 1.8 2 0 0 2 2 2 1 Lipoxygenase PPR_2 PF13041.6 ORF113284 - 1.6e-31 108.2 0.0 2.3e-07 30.9 0.1 5.4 3 2 3 6 6 6 6 PPR repeat family PPR PF01535.20 ORF113284 - 2.5e-31 105.7 0.1 0.00018 21.5 0.0 6.4 6 0 0 6 6 6 6 PPR repeat PPR_1 PF12854.7 ORF113284 - 3.5e-20 71.4 0.0 0.00062 19.4 0.0 6.2 6 0 0 6 6 6 4 PPR repeat PPR_3 PF13812.6 ORF113284 - 1e-17 63.9 0.0 1.6e-07 31.2 0.0 4.2 3 1 1 4 4 4 3 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF113284 - 7.6e-12 45.0 0.0 2.3e-07 30.4 0.0 2.8 2 1 1 3 3 3 2 Pentacotripeptide-repeat region of PRORP TPR_MalT PF17874.1 ORF113284 - 0.002 17.6 1.2 0.005 16.3 1.2 1.6 1 0 0 1 1 1 1 MalT-like TPR region TPR_16 PF13432.6 ORF113284 - 0.014 16.1 5.9 0.13 13.0 0.7 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat SPO22 PF08631.10 ORF113284 - 0.037 13.5 0.0 44 3.4 0.0 4.0 3 1 1 4 4 4 0 Meiosis protein SPO22/ZIP4 like SelB-wing_2 PF09106.11 ORF113284 - 0.05 13.8 3.1 32 4.8 0.0 4.7 4 1 0 4 4 4 0 Elongation factor SelB, winged helix TPR_12 PF13424.6 ORF113284 - 0.11 12.8 5.7 8.1 6.8 0.1 3.6 2 1 3 5 5 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF113284 - 0.22 11.5 1.1 35 4.4 0.1 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF113284 - 5.9 7.8 10.0 2.4 9.1 0.1 4.9 5 0 0 5 5 5 0 Tetratricopeptide repeat KxDL PF10241.9 ORF102499 - 6.4e-05 23.2 2.0 6.4e-05 23.2 2.0 5.1 5 0 0 5 5 5 2 Uncharacterized conserved protein Osmo_CC PF08946.10 ORF102499 - 0.00034 20.8 16.2 0.087 13.1 1.9 4.9 4 0 0 4 4 4 3 Osmosensory transporter coiled coil TMF_DNA_bd PF12329.8 ORF102499 - 0.0016 18.4 10.3 0.0016 18.4 10.3 7.3 5 3 2 7 7 7 1 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 ORF102499 - 0.4 11.0 14.1 12 6.2 3.3 5.1 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DASH_Dam1 PF08653.10 ORF102499 - 0.7 9.7 8.0 4.9 7.0 0.0 4.5 4 1 1 5 5 5 0 DASH complex subunit Dam1 MCPsignal PF00015.21 ORF102499 - 1.6 8.5 16.3 2.6 7.8 0.0 4.6 3 1 2 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF2209 PF09974.9 ORF102499 - 3.9 7.8 8.3 0.28 11.5 0.6 2.8 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2209) Ion_trans PF00520.31 ORF99631 - 8.7e-29 100.5 10.6 1.2e-28 100.0 10.6 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF99631 - 6.7e-06 26.5 1.1 0.0044 17.5 0.2 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF99631 - 0.00017 20.9 0.0 0.003 17.0 0.0 2.8 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF99631 - 0.00024 20.8 0.0 0.068 13.1 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain Focal_AT PF03623.13 ORF99631 - 0.00044 20.3 0.1 0.0018 18.3 0.1 2.0 2 0 0 2 2 2 1 Focal adhesion targeting region EF-hand_8 PF13833.6 ORF99631 - 0.0036 17.1 0.1 0.0096 15.8 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair RPW8 PF05659.11 ORF99631 - 0.046 13.4 0.2 0.16 11.6 0.0 1.9 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 ERM PF00769.19 ORF99631 - 0.048 13.5 0.1 0.048 13.5 0.1 1.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Nif11 PF07862.11 ORF99631 - 0.12 12.7 0.2 0.47 10.8 0.0 2.1 2 0 0 2 2 2 0 Nif11 domain VWA_2 PF13519.6 ORF85454 - 7.7e-15 55.5 0.1 2.2e-14 54.0 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF85454 - 7.3e-13 49.1 0.0 1.1e-12 48.5 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 ORF85454 - 5.9e-05 23.1 0.0 0.00011 22.2 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 ORF85454 - 0.0082 15.5 3.1 0.036 13.4 0.1 2.4 3 0 0 3 3 3 1 VWA domain containing CoxE-like protein vWA-TerF-like PF10138.9 ORF85454 - 0.031 14.4 0.0 0.049 13.7 0.0 1.3 1 0 0 1 1 1 0 vWA found in TerF C terminus Ank_2 PF12796.7 ORF76218 - 1.3e-13 51.4 0.0 2e-12 47.5 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF76218 - 2.2e-10 39.8 0.1 3.2e-05 24.0 0.0 4.6 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF76218 - 7.3e-09 36.0 0.2 7.9e-07 29.5 0.0 3.2 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF76218 - 5.7e-05 23.4 0.0 0.0042 17.5 0.0 3.0 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 ORF76218 - 0.00015 22.0 0.0 0.018 15.3 0.0 3.3 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Chitin_synth_2 PF03142.15 ORF71087 - 7.4e-12 44.7 11.5 1.6e-11 43.5 1.1 2.5 2 1 0 2 2 2 2 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF71087 - 2.3e-05 24.4 0.7 2.3e-05 24.4 0.7 2.3 3 1 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF71087 - 0.05 13.5 0.0 0.072 13.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF2254 PF10011.9 ORF71087 - 0.09 11.6 0.0 0.09 11.6 0.0 1.6 2 0 0 2 2 2 0 Predicted membrane protein (DUF2254) TMEMspv1-c74-12 PF11044.8 ORF71087 - 0.18 11.8 0.1 0.18 11.8 0.1 2.9 3 0 0 3 3 3 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF962 PF06127.11 ORF71087 - 1.7 8.8 4.9 0.7 10.0 0.5 2.6 3 1 0 3 3 3 0 Protein of unknown function (DUF962) Ion_trans PF00520.31 ORF58932 - 8.7e-29 100.5 10.6 1.2e-28 100.0 10.6 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF58932 - 6.7e-06 26.5 1.1 0.0044 17.5 0.2 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF58932 - 0.00017 20.9 0.0 0.003 17.0 0.0 2.8 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF58932 - 0.00024 20.8 0.0 0.068 13.1 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain Focal_AT PF03623.13 ORF58932 - 0.00044 20.3 0.1 0.0018 18.3 0.1 2.0 2 0 0 2 2 2 1 Focal adhesion targeting region EF-hand_8 PF13833.6 ORF58932 - 0.0036 17.1 0.1 0.0096 15.8 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair RPW8 PF05659.11 ORF58932 - 0.046 13.4 0.2 0.16 11.6 0.0 1.9 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 ERM PF00769.19 ORF58932 - 0.048 13.5 0.1 0.048 13.5 0.1 1.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Nif11 PF07862.11 ORF58932 - 0.12 12.7 0.2 0.47 10.8 0.0 2.1 2 0 0 2 2 2 0 Nif11 domain Pkinase PF00069.25 ORF29933 - 2.7e-75 253.1 0.1 5.6e-75 252.1 0.1 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29933 - 6.8e-34 117.3 0.0 1.4e-33 116.3 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF29933 - 2e-17 61.3 7.0 9.4e-05 21.7 0.0 4.8 4 0 0 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF29933 - 1e-15 57.9 6.5 9.1e-12 45.3 0.1 3.9 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF29933 - 1e-14 53.1 4.9 0.00025 20.7 0.1 4.3 4 0 0 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 ORF29933 - 2.7e-13 48.7 3.6 0.00032 20.0 0.0 3.7 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF29933 - 7.3e-10 38.5 4.8 3.4e-08 33.2 0.2 3.6 3 0 0 3 3 3 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF29933 - 1.9e-06 28.2 5.4 0.00043 20.6 0.9 3.6 3 1 0 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region EFhand_Ca_insen PF08726.10 ORF29933 - 2.1e-05 24.6 0.1 0.00024 21.1 0.0 2.5 2 0 0 2 2 2 1 Ca2+ insensitive EF hand Kdo PF06293.14 ORF29933 - 0.0022 17.4 0.5 0.0043 16.4 0.0 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF29933 - 0.0031 17.4 0.2 0.018 15.0 0.2 2.3 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand APH PF01636.23 ORF29933 - 0.0061 16.5 0.0 0.01 15.8 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF29933 - 0.016 14.6 0.0 0.43 9.9 0.0 2.5 1 1 0 2 2 2 0 Kinase-like Caleosin PF05042.13 ORF29933 - 0.041 13.8 0.4 3.5 7.5 0.1 3.0 2 2 0 2 2 2 0 Caleosin related protein EF-hand_9 PF14658.6 ORF29933 - 0.077 13.3 0.8 0.51 10.7 0.0 2.8 3 0 0 3 3 3 0 EF-hand domain DUF2073 PF09846.9 ORF29933 - 0.29 11.0 2.6 1.9 8.4 0.2 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2073) SR-25 PF10500.9 ORF24594 - 0.0096 15.6 8.0 0.017 14.8 8.0 1.3 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein SOG2 PF10428.9 ORF24594 - 0.019 14.2 6.8 0.026 13.7 6.8 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein DHHW PF14286.6 ORF24594 - 0.43 9.9 0.6 0.74 9.1 0.6 1.3 1 0 0 1 1 1 0 DHHW protein DUF4692 PF15763.5 ORF24594 - 1.3 9.5 10.2 2.7 8.4 10.2 1.5 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) Herpes_pp85 PF04637.12 ORF24594 - 6.6 5.0 7.1 9.7 4.5 7.1 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) LapA_dom PF06305.11 ORF20308 - 0.35 10.7 0.1 0.35 10.7 0.1 3.3 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain Phage_holin_3_3 PF16083.5 ORF20308 - 0.45 10.7 7.9 0.7 10.1 1.7 2.7 2 0 0 2 2 2 0 LydA holin phage, holin superfamily III Ank_2 PF12796.7 ORF144510 - 1.3e-13 51.4 0.0 2e-12 47.5 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF144510 - 2.2e-10 39.8 0.1 3.2e-05 24.0 0.0 4.6 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF144510 - 7.3e-09 36.0 0.2 7.9e-07 29.5 0.0 3.2 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF144510 - 5.7e-05 23.4 0.0 0.0042 17.5 0.0 3.0 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 ORF144510 - 0.00015 22.0 0.0 0.018 15.3 0.0 3.3 2 1 1 3 3 3 2 Ankyrin repeats (many copies) P2X_receptor PF00864.19 ORF143222 - 1.2e-06 27.8 2.7 0.00047 19.3 0.0 2.6 3 0 0 3 3 3 2 ATP P2X receptor ENTH PF01417.20 ORF138853 - 8.1e-29 100.2 0.1 1.7e-28 99.2 0.0 1.6 2 0 0 2 2 2 1 ENTH domain ANTH PF07651.16 ORF138853 - 0.013 14.5 0.0 0.019 13.9 0.0 1.2 1 0 0 1 1 1 0 ANTH domain PGI PF00342.19 ORF132386 - 5.1e-199 661.9 0.0 6.2e-199 661.6 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase SR-25 PF10500.9 ORF127336 - 0.0096 15.6 8.0 0.017 14.8 8.0 1.3 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein SOG2 PF10428.9 ORF127336 - 0.019 14.2 6.8 0.026 13.7 6.8 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein DHHW PF14286.6 ORF127336 - 0.43 9.9 0.6 0.74 9.1 0.6 1.3 1 0 0 1 1 1 0 DHHW protein DUF4692 PF15763.5 ORF127336 - 1.3 9.5 10.2 2.7 8.4 10.2 1.5 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) Herpes_pp85 PF04637.12 ORF127336 - 6.6 5.0 7.1 9.7 4.5 7.1 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF1116 PF06545.11 ORF117582 - 1.3e-87 292.8 0.3 1.7e-87 292.4 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1116) CpcD PF01383.21 ORF117582 - 0.12 12.7 0.1 0.26 11.6 0.1 1.5 1 0 0 1 1 1 0 CpcD/allophycocyanin linker domain AidB_N PF18158.1 ORF116558 - 4.7e-56 189.0 0.0 9.5e-56 188.0 0.0 1.5 1 0 0 1 1 1 1 Adaptive response protein AidB N-terminal domain Acyl-CoA_dh_1 PF00441.24 ORF116558 - 2.2e-31 109.1 1.1 7.2e-31 107.4 0.4 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF116558 - 5.2e-18 65.0 0.0 8.4e-18 64.4 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 ORF116558 - 1.8e-07 31.5 0.0 4.4e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain TPR_7 PF13176.6 ORF116558 - 0.75 10.0 2.7 34 4.8 0.1 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat REV1_C PF16727.5 ORF11291 - 0.022 15.1 6.3 1.4 9.3 0.3 2.8 2 0 0 2 2 2 0 DNA repair protein REV1 C-terminal domain Pentapeptide_4 PF13599.6 ORF105258 - 0.0079 16.3 6.8 0.042 14.0 1.5 3.2 3 0 0 3 3 3 1 Pentapeptide repeats (9 copies) CSN8_PSD8_EIF3K PF10075.9 ORF105258 - 0.47 10.4 3.6 0.85 9.6 0.1 3.0 3 1 1 4 4 4 0 CSN8/PSMD8/EIF3K family Pentapeptide_3 PF13576.6 ORF105258 - 1 9.6 4.0 2.4 8.4 0.1 2.6 2 0 0 2 2 2 0 Pentapeptide repeats (9 copies) Peptidase_S28 PF05577.12 ORF10030 - 2.3e-89 300.2 0.0 2.7e-89 299.9 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF10030 - 0.001 18.6 0.0 0.0019 17.7 0.0 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family RuBisCO_large PF00016.20 NODE_6038_length_1635_cov_218.482500_g1433_i6reverse_frame_1 - 4.7e-95 318.2 0.0 9e-95 317.3 0.0 1.5 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 NODE_6038_length_1635_cov_218.482500_g1433_i6reverse_frame_1 - 4.5e-35 120.4 0.0 7.4e-35 119.7 0.0 1.3 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain Pkinase PF00069.25 ORF6632 - 5.7e-48 163.6 0.0 1.1e-47 162.6 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6632 - 3.1e-17 62.7 0.7 4.5e-17 62.2 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF6632 - 7.6e-06 26.0 0.9 0.013 15.4 0.1 2.8 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF6632 - 9.7e-06 25.1 0.0 0.00084 18.7 0.0 2.4 1 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF6632 - 0.002 17.0 0.5 0.016 14.0 0.0 2.0 2 0 0 2 2 2 1 Fungal protein kinase DUF2785 PF10978.8 ORF6632 - 0.0078 16.0 0.8 0.016 15.0 0.8 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2785) UPF0242 PF06785.11 ORF6632 - 0.011 15.8 1.6 0.021 15.0 1.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FlxA PF14282.6 ORF6632 - 0.027 14.4 8.8 0.05 13.6 8.8 1.3 1 0 0 1 1 1 0 FlxA-like protein Peptidase_S64 PF08192.11 ORF6632 - 0.034 12.7 0.8 0.044 12.3 0.8 1.1 1 0 0 1 1 1 0 Peptidase family S64 APG6_N PF17675.1 ORF6632 - 0.059 13.9 5.6 0.11 13.0 5.6 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF6632 - 0.066 11.1 1.4 0.084 10.8 1.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FliJ PF02050.16 ORF6632 - 0.1 12.8 8.0 0.18 12.0 8.0 1.3 1 0 0 1 1 1 0 Flagellar FliJ protein Uso1_p115_C PF04871.13 ORF6632 - 0.17 12.2 6.3 0.34 11.3 6.3 1.5 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF4407 PF14362.6 ORF6632 - 0.2 10.9 3.2 0.31 10.3 3.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Prefoldin_2 PF01920.20 ORF6632 - 0.36 10.8 7.1 0.72 9.8 7.1 1.4 1 0 0 1 1 1 0 Prefoldin subunit PDEase_I_N PF08499.12 ORF6632 - 0.37 10.7 1.7 0.98 9.3 0.5 2.2 2 0 0 2 2 2 0 3'5'-cyclic nucleotide phosphodiesterase N-terminal Cep57_CLD_2 PF14197.6 ORF6632 - 0.39 10.8 5.2 0.53 10.4 2.8 2.4 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 CREPT PF16566.5 ORF6632 - 0.89 9.7 8.9 0.9 9.7 5.0 2.3 2 1 1 3 3 2 0 Cell-cycle alteration and expression-elevated protein in tumour DUF1664 PF07889.12 ORF6632 - 2.2 8.3 6.5 6.6 6.8 6.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Pkinase PF00069.25 ORF58605 - 3.7e-59 200.2 2.8 5.4e-58 196.4 0.3 3.0 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58605 - 5.1e-34 117.7 0.1 4.3e-26 91.8 0.3 2.3 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF58605 - 7.5e-05 22.2 0.2 0.0018 17.7 0.1 2.4 2 0 0 2 2 2 1 Kinase-like APH PF01636.23 ORF58605 - 0.13 12.1 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF3342 PF11822.8 ORF25071 - 0.017 15.3 0.0 0.038 14.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) Met_synt_B12 PF02965.17 ORF17389 - 5.2e-112 373.8 0.3 5.2e-112 373.8 0.3 1.5 2 0 0 2 2 2 1 Vitamin B12 dependent methionine synthase, activation domain B12-binding PF02310.19 ORF17389 - 5.3e-16 58.8 0.2 1.1e-15 57.8 0.2 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 ORF17389 - 1.7e-12 47.6 0.3 5.9e-12 45.9 0.1 2.2 2 0 0 2 2 2 1 B12 binding domain YtxH PF12732.7 ORF17389 - 0.19 12.3 2.4 1.2 9.7 0.1 2.7 3 0 0 3 3 3 0 YtxH-like protein ATP-synt_ab PF00006.25 ORF117425 - 1.1e-71 240.9 0.0 1.7e-71 240.3 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 ORF117425 - 9.1e-47 158.5 3.4 1.5e-46 157.8 3.4 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 ORF117425 - 4.1e-14 52.8 2.4 9.1e-14 51.7 2.4 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 ORF117425 - 0.00025 21.1 0.5 0.00054 20.1 0.5 1.5 1 0 0 1 1 1 1 HAS barrel domain CSD2 PF17876.1 ORF117425 - 0.0018 18.4 0.8 0.015 15.5 0.2 2.2 2 0 0 2 2 2 1 Cold shock domain DUF4142 PF13628.6 ORF117425 - 0.19 12.0 3.2 0.46 10.7 3.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4142) VWA_3 PF13768.6 ORF114151 - 2.1e-10 40.8 0.0 3.6e-10 40.0 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain AMP-binding PF00501.28 ORF113715 - 6.6e-60 202.9 0.2 9.4e-60 202.4 0.2 1.1 1 0 0 1 1 1 1 AMP-binding enzyme SpoIIM PF01944.17 ORF113715 - 0.012 15.7 0.3 0.019 15.0 0.3 1.2 1 0 0 1 1 1 0 Stage II sporulation protein M VWA_3 PF13768.6 ORF107976 - 2.1e-10 40.8 0.0 3.6e-10 40.0 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain Pkinase PF00069.25 ORF99551 - 4e-44 151.0 3.6 9.5e-44 149.7 3.6 1.7 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF99551 - 1.2e-24 87.0 1.7 2.8e-24 85.8 1.7 1.6 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF99551 - 8.9e-09 35.1 0.2 0.003 16.9 0.0 3.1 2 1 1 3 3 3 2 Kinase-like Kdo PF06293.14 ORF99551 - 0.00058 19.3 0.0 0.0012 18.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family GHL10 PF02638.15 ORF99551 - 0.02 14.0 0.3 0.045 12.8 0.0 1.6 2 0 0 2 2 2 0 Glycosyl hydrolase-like 10 C2 PF00168.30 ORF85053 - 4.7e-17 62.2 0.0 9e-17 61.2 0.0 1.4 1 0 0 1 1 1 1 C2 domain PHA_synth_III_E PF09712.10 ORF85053 - 0.083 12.0 0.2 0.12 11.4 0.2 1.2 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) ScdA_N PF04405.14 ORF73674 - 0.00012 21.6 0.0 1.3 8.8 0.0 4.2 3 1 1 4 4 4 2 Domain of Unknown function (DUF542) Clp_N PF02861.20 ORF73674 - 0.068 13.3 0.1 8.7 6.6 0.0 3.7 3 1 1 4 4 4 0 Clp amino terminal domain, pathogenicity island component NAD_binding_11 PF14833.6 ORF73674 - 0.12 12.6 4.6 0.64 10.3 1.2 3.5 2 1 1 3 3 3 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EI24 PF07264.11 ORF73674 - 2.4 8.4 6.7 1.2 9.3 3.4 1.9 1 1 1 2 2 2 0 Etoposide-induced protein 2.4 (EI24) CoA_trans PF01144.23 ORF40303 - 9e-27 93.9 0.3 3.1e-26 92.1 0.1 1.9 2 0 0 2 2 2 1 Coenzyme A transferase RCC1 PF00415.18 ORF36194 - 3.9e-16 59.4 22.3 0.0018 18.9 0.2 7.9 9 0 0 9 9 9 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF36194 - 2.2e-09 36.9 23.9 2.6e-07 30.3 1.9 6.4 6 0 0 6 6 6 3 Regulator of chromosome condensation (RCC1) repeat VWA_2 PF13519.6 ORF24778 - 2.3e-06 28.2 0.0 4.6e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF24778 - 0.00027 21.2 0.0 0.00041 20.6 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 ORF24778 - 0.00047 20.1 0.4 0.001 19.1 0.4 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain HET PF06985.11 ORF139303 - 0.019 15.3 0.2 0.055 13.8 0.0 1.7 1 1 1 2 2 2 0 Heterokaryon incompatibility protein (HET) TIR_2 PF13676.6 ORF139303 - 0.025 15.2 0.1 0.4 11.3 0.0 2.6 3 0 0 3 3 3 0 TIR domain UPF0029 PF01205.19 ORF13285 - 2.3e-08 34.3 0.0 4.7e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 Psm4 PF17063.5 ORF13285 - 0.31 11.7 1.5 3.2 8.6 0.1 2.8 2 0 0 2 2 2 0 Phenol-soluble modulin alpha 4 peptide UNC-79 PF14776.6 ORF13285 - 1.1 7.9 4.9 0.14 10.9 0.9 1.4 2 0 0 2 2 2 0 Cation-channel complex subunit UNC-79 MFS_1 PF07690.16 ORF92299 - 3.8e-16 59.0 7.3 3.8e-16 59.0 7.3 2.3 1 1 1 3 3 3 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF92299 - 3e-15 56.1 21.2 7.6e-14 51.4 21.2 3.4 1 1 0 1 1 1 1 Sugar (and other) transporter DUF2207 PF09972.9 ORF92299 - 0.69 8.6 16.8 0.21 10.3 1.0 3.1 2 1 1 3 3 3 0 Predicted membrane protein (DUF2207) PDEase_I PF00233.19 ORF73876 - 2.6e-44 151.7 6.2 4.5e-44 151.0 6.2 1.3 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Amastin PF07344.11 ORF73876 - 0.00016 21.6 2.4 0.00037 20.4 2.4 1.6 1 0 0 1 1 1 1 Amastin surface glycoprotein 7tm_3 PF00003.22 ORF73876 - 0.00094 19.0 4.1 0.0015 18.3 4.1 1.3 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR MFS_1 PF07690.16 ORF70515 - 4.4e-16 58.7 7.4 4.4e-16 58.7 7.4 2.2 1 1 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF70515 - 1.7e-15 56.8 20.7 5.4e-14 51.9 20.8 3.4 1 1 0 1 1 1 1 Sugar (and other) transporter DUF2207 PF09972.9 ORF70515 - 1.8 7.3 18.0 0.2 10.4 1.2 3.1 2 1 1 3 3 3 0 Predicted membrane protein (DUF2207) PH PF00169.29 ORF68135 - 1.7e-10 41.4 1.0 1.7e-10 41.4 1.0 3.0 3 0 0 3 3 3 1 PH domain PH_2 PF08458.10 ORF68135 - 0.0006 20.1 0.1 0.002 18.5 0.1 1.9 1 0 0 1 1 1 1 Plant pleckstrin homology-like region PH_8 PF15409.6 ORF68135 - 0.0095 16.2 1.0 0.039 14.2 1.0 2.1 1 1 0 1 1 1 1 Pleckstrin homology domain DUF5525 PF17663.1 ORF68135 - 0.21 9.7 1.3 0.29 9.2 1.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5525) Mcp5_PH PF12814.7 ORF68135 - 1.2 9.2 8.0 0.3 11.2 1.2 2.9 2 1 0 2 2 2 0 Meiotic cell cortex C-terminal pleckstrin homology Pkinase PF00069.25 ORF51891 - 6.3e-27 94.6 0.0 6.3e-27 94.6 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF51891 - 1.3e-11 44.2 0.0 2.1e-11 43.6 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF51891 - 5.6e-06 26.5 0.0 0.0013 18.8 0.1 2.5 2 0 0 2 2 2 2 Phosphotransferase enzyme family DUF1196 PF06709.11 ORF51891 - 0.38 10.9 0.0 0.38 10.9 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1196) GBP PF02263.19 ORF48729 - 6.1e-22 78.1 0.9 1.4e-21 77.0 0.0 1.9 2 0 0 2 2 2 1 Guanylate-binding protein, N-terminal domain HalX PF08663.10 ORF48729 - 0.0036 17.6 3.6 0.0036 17.6 3.6 4.0 3 1 0 3 3 3 1 HalX domain NPV_P10 PF05531.12 ORF48729 - 0.16 12.5 0.5 32 5.1 0.1 3.0 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein GAT PF03127.14 ORF48729 - 1.5 9.2 9.7 1.6 9.1 1.5 3.6 2 1 1 3 3 3 0 GAT domain LPP PF04728.13 ORF48729 - 2.7 8.5 7.3 8.3 6.9 0.1 3.2 3 0 0 3 3 3 0 Lipoprotein leucine-zipper DUF3573 PF12097.8 ORF48729 - 2.8 6.7 8.9 2.7 6.7 1.6 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3573) Fib_alpha PF08702.10 ORF48729 - 3.1 8.0 7.7 15 5.8 7.9 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Pkinase PF00069.25 ORF25825 - 6.3e-27 94.6 0.0 6.3e-27 94.6 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF25825 - 1.3e-11 44.2 0.0 2.1e-11 43.6 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF25825 - 5.6e-06 26.5 0.0 0.0013 18.8 0.1 2.5 2 0 0 2 2 2 2 Phosphotransferase enzyme family DUF1196 PF06709.11 ORF25825 - 0.38 10.9 0.0 0.38 10.9 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1196) PUF PF00806.19 ORF70076 - 2.6e-21 74.1 12.9 6.3e-06 25.6 0.3 5.6 5 0 0 5 5 5 5 Pumilio-family RNA binding repeat SIKE PF05769.11 ORF53258 - 0.0032 17.4 1.9 0.012 15.6 0.0 2.2 2 0 0 2 2 2 1 SIKE family PspA_IM30 PF04012.12 ORF53258 - 0.0053 16.4 7.9 0.0053 16.4 7.9 2.2 2 0 0 2 2 2 1 PspA/IM30 family TolA_bind_tri PF16331.5 ORF53258 - 0.013 15.5 3.2 0.013 15.5 3.2 2.9 3 0 0 3 3 3 0 TolA binding protein trimerisation Spc7 PF08317.11 ORF53258 - 0.14 11.1 11.6 1.5 7.6 0.2 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF4201 PF13870.6 ORF53258 - 0.34 10.6 10.9 0.92 9.2 0.2 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4201) K-box PF01486.17 ORF53258 - 0.4 10.9 8.7 0.17 12.1 0.3 2.6 2 0 0 2 2 2 0 K-box region GAS PF13851.6 ORF53258 - 0.77 9.1 12.3 4.5 6.6 5.3 2.4 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding FlaC_arch PF05377.11 ORF53258 - 0.94 9.9 2.9 38 4.8 0.2 3.0 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) Phage_GP20 PF06810.11 ORF53258 - 1 9.1 8.9 0.15 11.8 0.7 2.9 2 1 1 3 3 3 0 Phage minor structural protein GP20 Fez1 PF06818.15 ORF53258 - 1.7 9.0 9.1 0.77 10.2 1.9 2.4 2 1 0 2 2 2 0 Fez1 HIP1_clath_bdg PF16515.5 ORF53258 - 4.7 7.9 16.0 0.12 13.0 7.1 2.5 3 0 0 3 3 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4349 PF14257.6 ORF53258 - 7.8 5.9 10.6 0.82 9.1 5.7 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) Seryl_tRNA_N PF02403.22 ORF53258 - 8.8 6.6 9.6 29 4.9 0.1 2.5 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Cnn_1N PF07989.11 ORF53258 - 8.9 6.6 10.8 1.6 8.9 1.3 3.1 2 1 0 3 3 3 0 Centrosomin N-terminal motif 1 Csm1_N PF18504.1 ORF53258 - 9.2 6.7 12.7 1.2 9.6 2.0 2.9 3 0 0 3 3 3 0 Csm1 N-terminal domain SecD_SecF PF02355.16 ORF51716 - 1e-15 57.6 10.3 1.7e-15 56.9 10.3 1.2 1 0 0 1 1 1 1 Protein export membrane protein MMPL PF03176.15 ORF51716 - 2.1e-08 33.5 12.5 2.1e-08 33.5 12.5 1.6 2 0 0 2 2 2 1 MMPL family Sec_GG PF07549.14 ORF51716 - 2.6e-06 26.7 0.0 5.9e-06 25.6 0.0 1.6 1 0 0 1 1 1 1 SecD/SecF GG Motif Lipase_GDSL PF00657.22 ORF51716 - 0.086 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase SecD-TM1 PF13721.6 ORF51716 - 0.14 12.6 0.1 0.97 9.9 0.0 2.5 2 0 0 2 2 2 0 SecD export protein N-terminal TM region Patched PF02460.18 ORF51716 - 0.59 8.1 7.1 0.83 7.6 7.1 1.1 1 0 0 1 1 1 0 Patched family Sterol-sensing PF12349.8 ORF51716 - 0.99 9.2 5.0 1.8 8.4 5.0 1.4 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation HOOK PF05622.12 ORF5070 - 0.00016 20.0 36.5 0.00025 19.3 36.5 1.3 1 0 0 1 1 1 1 HOOK protein PHD PF00628.29 ORF5070 - 0.0043 16.9 4.1 0.014 15.3 4.1 1.9 1 0 0 1 1 1 1 PHD-finger zf-B_box PF00643.24 ORF5070 - 0.005 17.0 7.9 0.005 17.0 7.9 3.0 3 0 0 3 3 3 1 B-box zinc finger PHD_2 PF13831.6 ORF5070 - 0.034 13.7 1.6 0.076 12.6 1.6 1.6 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 ORF5070 - 0.87 9.6 4.9 2.1 8.4 4.9 1.6 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 DUF4407 PF14362.6 ORF5070 - 2.1 7.6 19.8 3.5 6.9 19.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Fez1 PF06818.15 ORF5070 - 5.3 7.4 40.0 0.38 11.2 26.5 3.0 2 1 1 3 3 3 0 Fez1 RINGv PF12906.7 ORF49702 - 7.1e-14 51.7 5.2 1.8e-13 50.4 5.2 1.7 1 0 0 1 1 1 1 RING-variant domain FHA PF00498.26 ORF49702 - 5.9e-12 45.8 0.2 1.7e-11 44.3 0.2 1.8 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF49702 - 0.00011 22.5 0.0 0.00032 21.0 0.0 1.8 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 ORF49702 - 0.00081 19.5 1.6 0.0026 17.9 1.6 1.8 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF49702 - 0.53 10.7 10.6 0.077 13.3 3.8 2.5 2 0 0 2 2 2 0 Ring finger domain DEAD PF00270.29 ORF28948 - 5.1e-33 114.3 0.0 1.6e-32 112.7 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF28948 - 3.9e-24 85.1 0.3 9.7e-24 83.9 0.1 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Apolipoprotein PF01442.18 ORF24547 - 5.8e-05 23.1 34.3 0.00031 20.7 11.7 3.9 1 1 1 2 2 2 1 Apolipoprotein A1/A4/E domain Cauli_DNA-bind PF03310.13 ORF24547 - 0.017 15.2 6.8 0.017 15.2 6.8 4.1 1 1 2 3 3 3 0 Caulimovirus DNA-binding protein Baculo_PEP_C PF04513.12 ORF24547 - 0.019 15.0 23.3 0.3 11.1 2.0 4.6 3 1 2 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4736 PF15883.5 ORF24547 - 0.65 9.7 3.4 2.8 7.6 2.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4736) YtxH PF12732.7 ORF24547 - 1.3 9.6 54.1 8.1 7.1 13.7 5.7 2 2 2 4 4 4 0 YtxH-like protein ApoO PF09769.9 ORF24547 - 1.6 8.7 13.8 0.42 10.6 0.6 3.4 3 2 0 3 3 3 0 Apolipoprotein O DUF883 PF05957.13 ORF24547 - 2.4 8.8 26.3 16 6.2 3.3 5.0 2 2 3 5 5 5 0 Bacterial protein of unknown function (DUF883) Taxilin PF09728.9 ORF24547 - 3.6 6.7 63.7 0.13 11.5 51.7 2.1 1 1 1 2 2 2 0 Myosin-like coiled-coil protein TipAS PF07739.13 ORF24547 - 5.6 7.5 26.7 4.3 7.9 3.8 4.0 2 2 1 3 3 3 0 TipAS antibiotic-recognition domain Prenyltransf PF01255.19 ORF125623 - 6.4e-80 267.9 0.1 8e-80 267.5 0.1 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase CTP_transf_1 PF01148.20 ORF125623 - 3.4e-70 236.8 16.9 4.8e-70 236.3 16.9 1.2 1 0 0 1 1 1 1 Cytidylyltransferase family CarS-like PF01864.17 ORF125623 - 0.035 14.1 2.8 0.055 13.4 0.3 2.3 2 0 0 2 2 2 0 CDP-archaeol synthase DUF4131 PF13567.6 ORF125623 - 2.5 7.7 28.6 2.1 8.0 9.1 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4131) EptA_B_N PF08019.12 ORF125623 - 2.7 7.9 11.1 0.025 14.5 2.4 2.1 2 0 0 2 2 2 0 Phosphoethanolamine transferase EptA/EptB DUF4199 PF13858.6 ORF125623 - 7.7 6.9 12.0 2.2 8.7 3.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) Bacillus_HBL PF05791.11 ORF91273 - 6.8e-05 22.8 0.2 0.00013 21.8 0.2 1.5 1 0 0 1 1 1 1 Bacillus haemolytic enterotoxin (HBL) Fib_alpha PF08702.10 ORF91273 - 0.0032 17.7 11.0 0.018 15.3 1.4 3.2 1 1 2 3 3 3 2 Fibrinogen alpha/beta chain family FTCD_C PF04961.12 ORF91273 - 0.013 15.3 0.8 0.013 15.3 0.8 2.4 3 0 0 3 3 3 0 Formiminotransferase-cyclodeaminase HrpB2 PF09487.10 ORF91273 - 0.52 10.8 7.1 0.17 12.3 0.5 2.9 3 0 0 3 3 3 0 Bacterial type III secretion protein (HrpB2) ORF6C PF10552.9 ORF91273 - 1.1 9.4 5.0 0.57 10.3 0.3 2.7 3 0 0 3 3 3 0 ORF6C domain NPV_P10 PF05531.12 ORF91273 - 1.1 9.7 2.8 1e+02 3.4 0.0 3.6 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein BRE1 PF08647.11 ORF91273 - 9.1 6.4 27.1 0.054 13.6 3.5 3.7 2 1 0 3 3 3 0 BRE1 E3 ubiquitin ligase PARP PF00644.20 ORF79239 - 2.9e-17 62.9 0.0 6.8e-16 58.4 0.0 2.2 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain ERGIC_N PF13850.6 ORF31561 - 0.0013 19.1 0.7 0.0041 17.4 0.7 1.9 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4064 PF13273.6 ORF31561 - 0.032 14.5 2.6 0.089 13.1 0.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Baculo_11_kDa PF06143.11 ORF31561 - 0.093 12.3 1.8 0.2 11.3 0.3 2.3 2 0 0 2 2 2 0 Baculovirus 11 kDa family RCC1 PF00415.18 ORF3124 - 8.6e-05 23.1 0.0 0.0028 18.2 0.0 2.3 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF3124 - 0.016 15.0 0.0 0.034 13.9 0.0 1.6 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat AAA_30 PF13604.6 ORF28750 - 1.3e-16 60.9 0.0 2.5e-16 59.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF28750 - 2.9e-07 30.9 0.3 0.00034 21.0 0.3 2.7 2 1 1 3 3 3 1 AAA domain Viral_helicase1 PF01443.18 ORF28750 - 9.9e-07 28.7 0.0 0.0022 17.8 0.0 2.3 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.6 ORF28750 - 8e-05 23.1 0.2 0.00025 21.5 0.2 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 ORF28750 - 0.00013 21.9 0.1 0.11 12.3 0.1 2.3 1 1 0 2 2 2 2 AAA domain KTI12 PF08433.10 ORF28750 - 0.00032 20.2 0.0 0.00052 19.5 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 PIF1 PF05970.14 ORF28750 - 0.00032 20.0 0.0 0.0062 15.7 0.0 2.2 2 0 0 2 2 2 1 PIF1-like helicase AAA_33 PF13671.6 ORF28750 - 0.00039 20.6 1.5 0.017 15.3 0.0 2.7 3 0 0 3 3 2 1 AAA domain AAA PF00004.29 ORF28750 - 0.00054 20.4 0.0 0.0032 17.9 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 ORF28750 - 0.00063 19.2 0.0 0.001 18.5 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 ORF28750 - 0.00096 19.2 0.0 0.0072 16.3 0.0 2.5 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF28750 - 0.0016 18.7 0.1 0.0058 16.9 0.1 1.9 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 ORF28750 - 0.0031 17.4 0.1 0.0057 16.6 0.1 1.4 1 0 0 1 1 1 1 NTPase AAA_18 PF13238.6 ORF28750 - 0.0038 17.8 0.2 0.015 15.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF28750 - 0.0052 16.5 0.1 0.0097 15.7 0.1 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein Zeta_toxin PF06414.12 ORF28750 - 0.0073 15.6 0.0 0.014 14.7 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin TsaE PF02367.17 ORF28750 - 0.01 15.8 0.0 0.071 13.1 0.0 2.1 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MobB PF03205.14 ORF28750 - 0.012 15.5 0.1 0.023 14.6 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NACHT PF05729.12 ORF28750 - 0.012 15.5 0.0 0.031 14.2 0.0 1.7 1 0 0 1 1 1 0 NACHT domain DUF2075 PF09848.9 ORF28750 - 0.03 13.6 0.0 0.052 12.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MeaB PF03308.16 ORF28750 - 0.046 12.7 0.1 0.084 11.8 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB GvpD PF07088.11 ORF28750 - 0.055 12.1 0.0 0.083 11.5 0.0 1.1 1 0 0 1 1 1 0 GvpD gas vesicle protein TrwB_AAD_bind PF10412.9 ORF28750 - 0.06 12.3 0.1 0.14 11.0 0.1 1.5 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_17 PF13207.6 ORF28750 - 0.14 12.6 0.1 0.98 9.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain TIP49 PF06068.13 ORF28750 - 0.16 11.2 0.1 0.24 10.6 0.1 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_24 PF13479.6 ORF28750 - 0.2 11.4 0.0 0.47 10.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF28750 - 0.22 10.9 0.1 0.48 9.7 0.0 1.6 2 0 0 2 2 1 0 KaiC Thioredoxin_6 PF13848.6 ORF150674 - 4.9e-08 33.1 11.2 1.1e-05 25.5 0.4 4.5 2 2 1 4 4 4 3 Thioredoxin-like domain Thioredoxin PF00085.20 ORF150674 - 0.002 18.1 1.0 0.11 12.5 0.0 3.7 5 0 0 5 5 5 1 Thioredoxin TPH PF13868.6 ORF12880 - 1.6e-05 23.6 133.7 1.6e-05 23.6 133.7 2.4 2 1 1 3 3 3 2 Trichohyalin-plectin-homology domain HEAT PF02985.22 ORF128132 - 1.7e-13 49.6 1.6 0.001 19.2 0.0 5.8 6 0 0 6 6 6 3 HEAT repeat HEAT_2 PF13646.6 ORF128132 - 8.9e-13 48.4 0.0 7.2e-08 32.7 0.0 2.7 1 1 1 2 2 2 2 HEAT repeats Arm PF00514.23 ORF128132 - 3.1e-10 39.7 0.8 9.4e-05 22.3 0.0 5.1 5 0 0 5 5 5 2 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF128132 - 1.7e-09 38.0 0.1 4.3e-05 23.9 0.0 4.4 4 1 1 5 5 5 2 HEAT-like repeat Atx10homo_assoc PF09759.9 ORF128132 - 7.8e-05 22.6 0.5 1.1 9.3 0.0 4.4 5 0 0 5 5 5 2 Spinocerebellar ataxia type 10 protein domain Cnd1 PF12717.7 ORF128132 - 0.0007 19.7 0.9 0.11 12.6 0.0 3.9 3 1 1 4 4 4 1 non-SMC mitotic condensation complex subunit 1 DUF3361 PF11841.8 ORF128132 - 0.013 15.4 0.8 4.9 7.1 0.0 4.1 2 2 2 4 4 4 0 Domain of unknown function (DUF3361) SIL1 PF16782.5 ORF128132 - 0.047 12.9 0.2 0.14 11.4 0.0 1.9 2 0 0 2 2 2 0 Nucleotide exchange factor SIL1 PUF PF00806.19 ORF128132 - 1.8 8.4 6.2 24 4.9 0.1 4.4 4 0 0 4 4 4 0 Pumilio-family RNA binding repeat UCH PF00443.29 ORF118061 - 1.6e-15 57.3 1.1 2.5e-15 56.7 1.1 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF118061 - 7.2e-09 35.7 0.7 7.2e-09 35.7 0.7 1.9 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase C1_2 PF03107.16 ORF118061 - 0.011 16.1 4.0 0.011 16.1 4.0 2.9 3 0 0 3 3 3 0 C1 domain DZR PF12773.7 ORF118061 - 0.77 9.8 13.8 0.029 14.4 7.1 2.1 2 0 0 2 2 2 0 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF118061 - 8 7.3 16.4 3.4 8.5 12.5 2.5 2 0 0 2 2 2 0 zinc-ribbon family ATG16 PF08614.11 ORF110097 - 0.0014 18.9 22.7 0.0014 18.9 22.7 1.9 2 1 0 2 2 2 1 Autophagy protein 16 (ATG16) PHD PF00628.29 ORF110097 - 0.0044 16.9 6.6 0.055 13.4 5.3 2.6 2 0 0 2 2 2 1 PHD-finger CALCOCO1 PF07888.11 ORF110097 - 0.0069 15.3 26.7 0.012 14.5 26.7 1.4 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like SlyX PF04102.12 ORF110097 - 0.0089 16.6 1.7 0.0089 16.6 1.7 3.7 2 1 2 4 4 4 1 SlyX TMF_DNA_bd PF12329.8 ORF110097 - 0.015 15.3 13.5 0.015 15.3 13.5 4.0 2 1 2 4 4 3 0 TATA element modulatory factor 1 DNA binding BBP1_C PF15272.6 ORF110097 - 0.06 13.2 40.1 0.089 12.6 18.9 3.0 1 1 1 2 2 2 0 Spindle pole body component BBP1, C-terminal PHD_2 PF13831.6 ORF110097 - 0.082 12.5 3.2 0.19 11.3 3.2 1.6 1 0 0 1 1 1 0 PHD-finger Golgin_A5 PF09787.9 ORF110097 - 0.13 11.7 30.8 0.22 11.0 30.8 1.4 1 0 0 1 1 1 0 Golgin subfamily A member 5 ZYG-11_interact PF05884.12 ORF110097 - 0.52 9.7 5.2 1 8.7 5.2 1.6 1 0 0 1 1 1 0 Interactor of ZYG-11 DUF4407 PF14362.6 ORF110097 - 0.6 9.4 17.4 1 8.7 17.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-B_box PF00643.24 ORF110097 - 0.6 10.3 14.6 0.13 12.5 10.4 1.9 2 0 0 2 2 2 0 B-box zinc finger Spc7 PF08317.11 ORF110097 - 7.4 5.3 39.9 5.8 5.7 13.7 2.4 1 1 1 2 2 2 0 Spc7 kinetochore protein ATG16 PF08614.11 ORF10455 - 0.0014 18.9 22.7 0.0014 18.9 22.7 1.9 2 1 0 2 2 2 1 Autophagy protein 16 (ATG16) PHD PF00628.29 ORF10455 - 0.0058 16.5 7.2 0.074 13.0 5.8 2.6 2 0 0 2 2 2 1 PHD-finger CALCOCO1 PF07888.11 ORF10455 - 0.0069 15.3 26.7 0.012 14.5 26.7 1.4 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like SlyX PF04102.12 ORF10455 - 0.0089 16.6 1.7 0.0089 16.6 1.7 3.7 2 1 2 4 4 4 1 SlyX TMF_DNA_bd PF12329.8 ORF10455 - 0.015 15.3 13.5 0.015 15.3 13.5 4.0 2 1 2 4 4 3 0 TATA element modulatory factor 1 DNA binding BBP1_C PF15272.6 ORF10455 - 0.06 13.2 40.1 0.089 12.6 18.9 3.0 1 1 1 2 2 2 0 Spindle pole body component BBP1, C-terminal Golgin_A5 PF09787.9 ORF10455 - 0.13 11.7 30.8 0.22 11.0 30.8 1.4 1 0 0 1 1 1 0 Golgin subfamily A member 5 PHD_2 PF13831.6 ORF10455 - 0.15 11.6 3.5 0.42 10.2 3.5 1.7 1 0 0 1 1 1 0 PHD-finger ZYG-11_interact PF05884.12 ORF10455 - 0.52 9.7 5.2 1 8.7 5.2 1.6 1 0 0 1 1 1 0 Interactor of ZYG-11 zf-B_box PF00643.24 ORF10455 - 0.54 10.5 15.5 0.11 12.6 11.3 1.9 2 0 0 2 2 2 0 B-box zinc finger DUF4407 PF14362.6 ORF10455 - 0.59 9.4 17.4 1 8.7 17.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spc7 PF08317.11 ORF10455 - 7.4 5.4 39.9 5.8 5.7 13.7 2.4 1 1 1 2 2 2 0 Spc7 kinetochore protein RCC1 PF00415.18 ORF102482 - 8.6e-05 23.1 0.0 0.0028 18.2 0.0 2.3 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF102482 - 0.016 15.0 0.0 0.034 13.9 0.0 1.6 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat CCG PF02754.16 ORF83732 - 0.034 14.4 0.1 2.4 8.4 0.0 2.5 2 0 0 2 2 2 0 Cysteine-rich domain Fz PF01392.22 ORF83732 - 1.2 9.8 5.1 33 5.2 5.1 2.3 1 1 0 1 1 1 0 Fz domain MFS_1 PF07690.16 ORF61944 - 1.7e-13 50.2 15.5 1.7e-13 50.2 15.5 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF61944 - 7.5e-11 41.6 21.0 5.6e-10 38.7 20.5 2.2 1 1 0 1 1 1 1 Sugar (and other) transporter Ig_C17orf99 PF17736.1 ORF61944 - 0.089 12.8 0.0 0.24 11.4 0.0 1.7 1 0 0 1 1 1 0 C17orf99 Ig domain Asp PF00026.23 ORF54030 - 1.6e-33 116.5 3.4 2.2e-33 116.0 3.4 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF54030 - 5.5e-16 59.3 1.7 5.5e-16 59.3 1.7 2.4 3 0 0 3 3 3 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF54030 - 1.3e-12 47.8 0.0 3.9e-12 46.2 0.0 1.8 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF54030 - 0.018 15.7 0.0 1.4 9.6 0.0 2.4 2 0 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 ORF54030 - 0.022 15.3 0.0 0.16 12.5 0.0 2.1 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease SSF PF00474.17 ORF39373 - 6.4e-13 48.3 24.0 6.4e-13 48.3 24.0 2.0 2 1 0 2 2 2 1 Sodium:solute symporter family RSN1_7TM PF02714.15 ORF21006 - 4.5e-33 114.7 20.5 8.4e-18 64.6 10.8 2.1 2 0 0 2 2 2 2 Calcium-dependent channel, 7TM region, putative phosphate PHM7_cyt PF14703.6 ORF21006 - 0.17 12.1 0.0 0.4 10.9 0.0 1.6 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Thioredoxin PF00085.20 ORF127035 - 5.2e-13 48.9 5.5 3.2e-10 39.9 0.2 3.4 4 0 0 4 4 4 2 Thioredoxin MID_MedPIWI PF18296.1 ORF127035 - 0.006 16.4 1.6 0.017 14.9 0.6 2.0 2 0 0 2 2 2 1 MID domain of medPIWI Thioredoxin_2 PF13098.6 ORF127035 - 0.009 16.4 1.1 0.028 14.9 0.3 2.3 2 0 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF127035 - 0.039 14.1 1.0 0.44 10.8 0.2 2.8 2 1 0 2 2 2 0 Thioredoxin-like Thioredoxin_3 PF13192.6 ORF127035 - 0.11 12.5 0.0 0.41 10.7 0.0 2.0 1 0 0 1 1 1 0 Thioredoxin domain Thioredoxin_8 PF13905.6 ORF127035 - 0.33 11.3 5.1 0.28 11.5 0.4 3.2 3 0 0 3 3 3 0 Thioredoxin-like DUF836 PF05768.14 ORF127035 - 0.51 10.8 4.4 0.76 10.2 0.2 3.0 2 0 0 2 2 2 0 Glutaredoxin-like domain (DUF836) AA_permease_2 PF13520.6 ORF120297 - 6.3e-28 97.7 59.9 8.8e-28 97.3 59.9 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF120297 - 3.1e-10 39.3 52.6 1e-09 37.5 52.6 1.8 1 1 0 1 1 1 1 Amino acid permease Tubulin PF00091.25 ORF120297 - 0.11 12.7 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain SSF PF00474.17 ORF118723 - 6.4e-13 48.3 24.0 6.4e-13 48.3 24.0 2.0 2 1 0 2 2 2 1 Sodium:solute symporter family p450 PF00067.22 ORF108302 - 2.2e-56 191.6 2.3 2.9e-56 191.2 2.3 1.0 1 0 0 1 1 1 1 Cytochrome P450 Exog_C PF18026.1 ORF108302 - 0.014 15.4 0.1 0.038 14.1 0.1 1.7 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain TrbE PF11100.8 ORF108302 - 0.13 12.5 1.6 0.28 11.4 1.6 1.5 1 0 0 1 1 1 0 Conjugal transfer protein TrbE Cpn60_TCP1 PF00118.24 ORF93625 - 1.9e-149 498.5 23.8 2.3e-149 498.2 23.8 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF1441 PF07278.11 ORF93625 - 0.0061 16.5 0.0 0.019 14.9 0.0 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1441) Cpn60_TCP1 PF00118.24 ORF92122 - 3.8e-154 513.9 9.7 4.4e-154 513.8 9.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PUF PF00806.19 ORF62357 - 1.1e-28 97.3 0.2 9e-07 28.2 0.1 5.3 5 0 0 5 5 5 5 Pumilio-family RNA binding repeat Mac PF12464.8 ORF62357 - 0.29 11.4 2.5 5.9 7.2 0.1 2.6 2 0 0 2 2 2 0 Maltose acetyltransferase fn3 PF00041.21 ORF5594 - 1.9e-28 98.6 23.8 4.7e-10 39.7 3.9 5.8 6 1 0 6 6 6 5 Fibronectin type III domain fn3_4 PF16794.5 ORF5594 - 5.3e-06 26.3 0.3 5.1 7.1 0.0 5.2 5 1 0 5 5 5 3 Fibronectin-III type domain Pur_ac_phosph_N PF16656.5 ORF5594 - 0.01 16.4 28.0 0.029 14.9 5.3 5.4 5 1 0 5 5 5 0 Purple acid Phosphatase, N-terminal domain FIST_C PF10442.9 ORF47020 - 3.6e-18 65.8 0.0 8.4e-18 64.6 0.0 1.6 1 0 0 1 1 1 1 FIST C domain FIST PF08495.10 ORF47020 - 1.2e-11 44.9 3.0 3.4e-11 43.4 1.1 2.2 2 0 0 2 2 2 1 FIST N domain TPR_12 PF13424.6 ORF36967 - 0.05 13.9 0.4 4.2 7.7 0.0 2.9 2 2 0 2 2 2 0 Tetratricopeptide repeat mRNA_cap_C PF03919.15 ORF36967 - 0.29 11.8 6.9 0.15 12.7 1.9 2.9 2 1 1 3 3 3 0 mRNA capping enzyme, C-terminal domain TPR_1 PF00515.28 ORF36967 - 2.6 8.0 5.9 2.6 8.0 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat Pkinase_Tyr PF07714.17 ORF28514 - 4.1e-57 193.4 0.0 5.3e-57 193.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF28514 - 1.9e-47 161.9 0.0 2.7e-47 161.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF28514 - 0.039 12.7 0.0 0.062 12.1 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase fn3 PF00041.21 ORF136771 - 1.9e-28 98.6 23.8 4.7e-10 39.7 3.9 5.8 6 1 0 6 6 6 5 Fibronectin type III domain fn3_4 PF16794.5 ORF136771 - 5.3e-06 26.3 0.3 5.1 7.1 0.0 5.2 5 1 0 5 5 5 3 Fibronectin-III type domain Pur_ac_phosph_N PF16656.5 ORF136771 - 0.01 16.4 28.0 0.029 14.9 5.3 5.4 5 1 0 5 5 5 0 Purple acid Phosphatase, N-terminal domain BTB PF00651.31 ORF112394 - 2.5e-19 69.5 2.2 2.8e-18 66.1 0.1 2.5 1 1 1 2 2 2 1 BTB/POZ domain CENP-Q PF13094.6 ORF112394 - 0.024 14.8 2.7 0.042 14.1 2.7 1.3 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit MRC1 PF09444.10 ORF112394 - 0.032 14.7 2.7 0.058 13.9 2.7 1.3 1 0 0 1 1 1 0 MRC1-like domain Sld5 PF05916.11 ORF112394 - 0.13 12.8 2.0 0.47 10.9 1.0 2.1 2 0 0 2 2 2 0 GINS complex protein BACK PF07707.15 ORF112394 - 0.91 9.7 0.0 0.91 9.7 0.0 3.0 4 0 0 4 4 4 0 BTB And C-terminal Kelch Ligase_CoA PF00549.19 ORF105238 - 1.8e-55 187.0 0.0 8.5e-55 184.8 0.0 2.1 2 0 0 2 2 2 1 CoA-ligase CoA_binding PF02629.19 ORF105238 - 2e-13 50.8 0.6 6.6e-12 46.0 0.1 2.4 2 0 0 2 2 2 1 CoA binding domain Succ_CoA_lig PF13607.6 ORF105238 - 0.009 15.8 0.0 0.026 14.3 0.0 1.8 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain NIF PF03031.18 ORF102464 - 6.8e-47 159.1 0.2 1.3e-46 158.3 0.2 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase UBX PF00789.20 ORF100916 - 5.1e-14 52.2 0.2 2.4e-13 50.1 0.1 2.3 3 0 0 3 3 3 1 UBX domain Thioredoxin_7 PF13899.6 ORF100916 - 5e-05 23.4 0.2 0.00091 19.4 0.0 2.8 3 0 0 3 3 3 1 Thioredoxin-like UBA_4 PF14555.6 ORF100916 - 7.4e-05 22.5 1.6 0.00011 22.0 0.4 1.9 2 0 0 2 2 2 1 UBA-like domain PorA PF11271.8 ORF100916 - 0.00039 19.8 1.6 0.0006 19.2 1.6 1.2 1 0 0 1 1 1 1 Porin PorA TAP_C PF03943.13 ORF100916 - 0.0014 18.2 0.3 0.0076 15.9 0.1 2.3 2 0 0 2 2 2 1 TAP C-terminal domain DUF61 PF01886.16 ORF100916 - 0.0069 16.4 2.0 0.44 10.6 0.0 2.5 2 0 0 2 2 2 1 Protein of unknown function DUF61 AIF-MLS PF14962.6 ORF100916 - 1.8 8.5 6.2 3.5 7.5 6.2 1.4 1 0 0 1 1 1 0 Mitochondria Localisation Sequence Pkinase PF00069.25 ORF65234 - 4.1e-51 173.9 0.0 5.4e-51 173.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF65234 - 6.4e-23 81.3 0.0 9.4e-23 80.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF65234 - 5.6e-06 25.4 0.0 9.8e-06 24.6 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF65234 - 0.00041 20.4 0.6 0.87 9.5 0.1 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF65234 - 0.0024 17.3 0.0 0.0036 16.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF65234 - 0.018 14.4 0.1 0.035 13.5 0.1 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RF3_C PF16658.5 ORF60959 - 4.1e-47 159.3 0.1 7.4e-47 158.4 0.1 1.5 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain GTP_EFTU PF00009.27 ORF60959 - 1.7e-46 158.2 0.0 2.6e-46 157.6 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF60959 - 1.2e-11 44.8 0.1 4.1e-11 43.1 0.1 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF60959 - 0.00012 22.1 0.0 0.00025 21.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 ORF60959 - 0.00021 21.3 0.0 0.0004 20.4 0.0 1.4 1 0 0 1 1 1 1 Elongation Factor G, domain II Ras PF00071.22 ORF60959 - 0.045 13.3 0.0 0.09 12.4 0.0 1.4 1 0 0 1 1 1 0 Ras family Roc PF08477.13 ORF60959 - 0.15 12.3 0.0 0.48 10.6 0.0 1.9 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase PIP5K PF01504.18 ORF4828 - 3.5e-62 210.1 6.2 4.6e-62 209.7 6.2 1.1 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Ank_2 PF12796.7 ORF40477 - 1.4e-17 64.0 3.5 2.8e-05 24.6 0.4 4.7 3 1 2 5 5 5 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF40477 - 1.4e-11 44.4 3.2 0.01 16.1 0.1 4.8 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF40477 - 1.7e-10 40.9 8.1 0.00063 20.1 0.0 5.6 5 0 0 5 5 5 3 Ankyrin repeat Ank_4 PF13637.6 ORF40477 - 2.6e-10 40.6 2.6 0.041 14.5 0.2 5.5 3 2 1 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF40477 - 5.6e-10 38.6 3.1 0.012 16.0 0.0 5.8 6 0 0 6 6 6 3 Ankyrin repeat Glyco_transf_15 PF01793.16 ORF2759 - 5.7e-08 32.4 0.0 7.3e-07 28.7 0.0 2.0 1 1 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase Carboxyl_trans PF01039.22 ORF139332 - 8.4e-184 611.8 0.1 9.8e-184 611.6 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain DNA_pol_A PF00476.20 ORF126411 - 3.1e-51 174.6 0.0 4.1e-50 170.9 0.0 2.4 1 1 1 2 2 2 1 DNA polymerase family A SAP PF02037.27 ORF126411 - 1.2e-08 34.4 1.1 2.8e-08 33.3 0.3 2.1 2 0 0 2 2 2 1 SAP domain Oxidored_nitro PF00148.19 ORF126411 - 0.026 13.3 0.0 0.1 11.3 0.0 1.8 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase Nod1 PF17114.5 ORF123009 - 0.017 15.3 1.0 0.052 13.7 1.0 1.9 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 OrfA PF17495.2 ORF123009 - 0.16 12.2 3.1 8.3 6.6 1.2 2.5 1 1 1 2 2 2 0 Vpr-like OrfA DUF2968 PF11180.8 ORF123009 - 3.7 7.2 7.7 6.6 6.3 0.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) Nod1 PF17114.5 ORF114411 - 0.017 15.3 1.0 0.052 13.7 1.0 1.9 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 OrfA PF17495.2 ORF114411 - 0.16 12.2 3.1 8.3 6.6 1.2 2.5 1 1 1 2 2 2 0 Vpr-like OrfA DUF2968 PF11180.8 ORF114411 - 3.7 7.2 7.7 6.6 6.3 0.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) Pkinase PF00069.25 ORF91346 - 1.4e-59 201.6 0.2 2.5e-59 200.8 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF91346 - 7.4e-30 104.1 0.1 2.4e-29 102.4 0.0 1.8 3 0 0 3 3 3 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF91346 - 0.00041 19.3 0.7 0.0011 17.9 0.0 2.0 3 0 0 3 3 3 1 Fungal protein kinase Kdo PF06293.14 ORF91346 - 0.00049 19.5 0.1 0.00091 18.6 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF91346 - 0.0017 18.3 0.0 0.0053 16.7 0.0 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF91346 - 0.018 14.4 0.0 0.039 13.3 0.0 1.5 2 0 0 2 2 2 0 Kinase-like Hypoth_Ymh PF09509.10 ORF91346 - 0.076 12.9 1.1 13 5.8 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (Hypoth_ymh) FTA2 PF13095.6 ORF91346 - 0.086 12.5 0.0 0.26 10.9 0.0 1.8 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 RelB_N PF18506.1 ORF91346 - 0.31 10.9 4.6 0.087 12.6 0.6 2.3 2 0 0 2 2 2 0 RelB Antitoxin alpha helical domain Ammonium_transp PF00909.21 ORF79688 - 8.2e-101 337.6 31.1 1e-100 337.3 31.1 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF5379 PF17350.2 ORF79625 - 1.6 9.1 9.4 21 5.5 0.1 3.6 3 0 0 3 3 3 0 Family of unknown function (DUF5379) Dynactin_p62 PF05502.13 ORF73135 - 1.3e-07 30.8 11.1 7.9e-07 28.2 3.6 2.3 2 0 0 2 2 2 2 Dynactin p62 family MqsA_antitoxin PF15731.5 ORF73135 - 0.22 11.6 0.7 0.4 10.8 0.7 1.4 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA tRNA-synt_2b PF00587.25 ORF68966 - 6.6e-30 104.4 0.0 8e-28 97.6 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 ORF68966 - 3.2e-11 43.2 0.1 2.1e-10 40.6 0.1 2.2 2 0 0 2 2 2 1 Anticodon binding domain IQ PF00612.27 ORF34719 - 0.059 13.2 0.8 0.65 9.9 0.0 2.3 2 0 0 2 2 2 0 IQ calmodulin-binding motif DUF5379 PF17350.2 ORF115393 - 1.6 9.1 9.4 21 5.5 0.1 3.6 3 0 0 3 3 3 0 Family of unknown function (DUF5379) TPR_MLP1_2 PF07926.12 ORF105156 - 0.013 15.6 8.7 0.013 15.6 8.7 5.8 4 2 1 5 5 5 0 TPR/MLP1/MLP2-like protein SlyX PF04102.12 ORF105156 - 0.03 14.9 1.7 0.03 14.9 1.7 5.3 4 2 1 5 5 5 0 SlyX Hemerythrin PF01814.23 ORF105156 - 1.8 9.2 8.9 1.1 9.9 3.9 2.8 2 1 0 2 2 2 0 Hemerythrin HHE cation binding domain DUF4250 PF14056.6 ORF105156 - 7.5 6.6 7.8 1.5 8.8 0.5 3.5 4 0 0 4 4 4 0 Domain of unknown function (DUF4250) BPD_transp_1 PF00528.22 ORF10217 - 9.1e-19 67.9 20.4 9.1e-19 67.9 20.4 1.9 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Ion_trans PF00520.31 ORF8540 - 2.8e-18 66.1 3.3 3.7e-18 65.6 3.3 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF8540 - 9.7e-10 38.3 0.8 2.3e-09 37.1 0.8 1.7 1 0 0 1 1 1 1 Ion channel Alpha_kinase PF02816.18 ORF83829 - 3.4e-38 131.6 0.0 7.8e-38 130.4 0.0 1.6 1 0 0 1 1 1 1 Alpha-kinase family VWA_3 PF13768.6 ORF83829 - 0.01 15.8 0.0 0.021 14.8 0.0 1.5 1 0 0 1 1 1 0 von Willebrand factor type A domain HSP70 PF00012.20 ORF78563 - 2.2e-206 686.7 1.5 2.4e-206 686.5 1.5 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF78563 - 1.8e-16 59.9 0.1 2.7e-16 59.3 0.1 1.2 1 0 0 1 1 1 1 MreB/Mbl protein FGGY_C PF02782.16 ORF78563 - 0.0027 17.5 0.0 0.01 15.6 0.0 1.9 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain Spore_GerAC PF05504.11 ORF78563 - 0.016 15.4 1.4 0.24 11.6 0.0 2.7 3 0 0 3 3 3 0 Spore germination B3/ GerAC like, C-terminal DDR PF08841.10 ORF78563 - 0.025 13.6 0.2 0.2 10.6 0.1 2.2 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain IlvN PF07991.12 ORF55137 - 2.5e-58 196.3 0.1 4e-58 195.6 0.1 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 ORF55137 - 1.8e-52 177.4 0.2 1.5e-28 99.9 0.0 2.3 2 0 0 2 2 2 2 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 ORF55137 - 0.0007 19.0 0.0 0.0013 18.2 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 ORF55137 - 0.0058 17.0 0.0 0.018 15.5 0.0 1.8 1 0 0 1 1 1 1 Putative NAD(P)-binding ApbA PF02558.16 ORF55137 - 0.011 15.4 0.0 0.019 14.6 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA AdoHcyase_NAD PF00670.21 ORF55137 - 0.034 14.2 0.0 0.074 13.1 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HSP70 PF00012.20 ORF52834 - 5e-201 669.0 1.2 6.1e-201 668.7 1.2 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF52834 - 1.8e-16 59.9 0.1 2.7e-16 59.3 0.1 1.2 1 0 0 1 1 1 1 MreB/Mbl protein FGGY_C PF02782.16 ORF52834 - 0.0051 16.6 0.0 0.01 15.6 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Spore_GerAC PF05504.11 ORF52834 - 0.018 15.3 1.5 0.24 11.6 0.0 2.6 3 0 0 3 3 3 0 Spore germination B3/ GerAC like, C-terminal DDR PF08841.10 ORF52834 - 0.026 13.5 0.2 0.2 10.6 0.1 2.2 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain He_PIG PF05345.12 ORF39671 - 0.00044 20.4 3.3 0.0014 18.8 3.3 1.9 1 0 0 1 1 1 1 Putative Ig domain Ig_C17orf99 PF17736.1 ORF39671 - 0.081 13.0 0.1 0.26 11.4 0.1 1.8 1 0 0 1 1 1 0 C17orf99 Ig domain MitMem_reg PF13012.6 ORF38154 - 0.01 16.2 5.1 0.01 16.2 5.1 2.3 2 1 0 2 2 2 0 Maintenance of mitochondrial structure and function DUF1515 PF07439.11 ORF38154 - 1.9 8.5 8.6 1.7 8.7 1.2 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1515) XLF PF09302.11 ORF38154 - 2.3 8.3 14.3 3 8.0 10.4 3.1 1 1 1 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component ArsR PF09824.9 ORF38154 - 3.2 7.3 9.8 0.46 10.1 2.3 2.9 3 0 0 3 3 3 0 ArsR transcriptional regulator Histone_HNS PF00816.21 ORF38154 - 4.6 8.1 10.6 0.19 12.6 0.6 3.4 3 1 0 3 3 3 0 H-NS histone family RNA_pol_Rpb4 PF03874.16 ORF38154 - 8.5 6.7 16.6 30 5.0 12.0 3.6 1 1 1 2 2 2 0 RNA polymerase Rpb4 YabA PF06156.13 ORF38154 - 9.4 6.9 13.5 11 6.7 0.1 3.8 3 1 1 4 4 4 0 Initiation control protein YabA MFMR_assoc PF16596.5 ORF17836 - 0.14 12.6 4.3 0.36 11.3 4.3 1.6 1 0 0 1 1 1 0 Disordered region downstream of MFMR Ist1 PF03398.14 ORF17836 - 0.21 11.5 4.8 2.4 8.1 0.4 3.8 3 1 0 3 3 3 0 Regulator of Vps4 activity in the MVB pathway Kelch_1 PF01344.25 ORF146849 - 2.5e-19 68.6 10.8 3.9e-08 32.8 0.1 4.5 5 0 0 5 5 4 2 Kelch motif Kelch_6 PF13964.6 ORF146849 - 7.9e-14 51.4 4.8 3.2e-05 24.0 0.0 4.6 4 1 1 5 5 4 2 Kelch motif zf-B_box PF00643.24 ORF146849 - 3e-10 40.1 5.3 3e-10 40.1 5.3 3.3 2 1 1 3 3 3 1 B-box zinc finger zf-RING_UBOX PF13445.6 ORF146849 - 1.9e-07 31.0 4.8 1.9e-07 31.0 4.8 3.5 2 1 1 3 3 3 1 RING-type zinc-finger Kelch_5 PF13854.6 ORF146849 - 6.3e-07 29.3 6.8 0.027 14.4 0.2 4.2 4 0 0 4 4 4 2 Kelch motif zf-RING_2 PF13639.6 ORF146849 - 8.2e-07 29.3 9.1 8.2e-07 29.3 9.1 3.1 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 ORF146849 - 2.4e-06 27.4 7.2 2.4e-06 27.4 7.2 3.3 2 0 0 2 2 2 1 zinc-RING finger domain Kelch_4 PF13418.6 ORF146849 - 1.3e-05 25.1 3.8 0.0048 16.9 0.0 4.1 3 1 1 4 4 4 1 Galactose oxidase, central domain zf-C3HC4_2 PF13923.6 ORF146849 - 7.4e-05 22.5 8.9 7.4e-05 22.5 8.9 2.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Kelch_2 PF07646.15 ORF146849 - 0.00033 20.5 5.4 0.83 9.7 0.1 4.5 5 0 0 5 5 5 2 Kelch motif zf-C3HC4 PF00097.25 ORF146849 - 0.00034 20.4 9.5 0.00034 20.4 9.5 3.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Mit_KHE1 PF10173.9 ORF146849 - 0.0015 18.7 3.0 0.0029 17.7 3.0 1.4 1 0 0 1 1 1 1 Mitochondrial K+-H+ exchange-related zf-C3HC4_4 PF15227.6 ORF146849 - 0.0021 18.2 9.7 0.0021 18.2 9.7 3.0 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF146849 - 0.0079 16.0 6.8 0.0079 16.0 6.8 3.2 2 1 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF146849 - 0.018 14.8 7.0 0.018 14.8 7.0 3.8 4 0 0 4 4 3 0 RING/Ubox like zinc-binding domain KH_5 PF13184.6 ORF146849 - 0.029 14.5 0.4 0.077 13.1 0.4 1.7 1 0 0 1 1 1 0 NusA-like KH domain Exonuc_VII_L PF02601.15 ORF146849 - 0.088 12.4 2.6 0.16 11.5 2.6 1.5 1 0 0 1 1 1 0 Exonuclease VII, large subunit C1_2 PF03107.16 ORF146849 - 0.75 10.2 8.5 1.3 9.4 1.9 3.0 2 0 0 2 2 2 0 C1 domain YscO PF07321.12 ORF146849 - 0.8 9.7 4.3 0.83 9.6 2.9 1.8 2 0 0 2 2 1 0 Type III secretion protein YscO FYVE PF01363.21 ORF146849 - 1.2 9.3 14.5 12 6.1 6.2 3.1 1 1 1 2 2 2 0 FYVE zinc finger Histidinol_dh PF00815.20 ORF146849 - 1.5 7.7 3.3 2.5 7.0 3.3 1.3 1 0 0 1 1 1 0 Histidinol dehydrogenase DUF4890 PF16231.5 ORF146849 - 4.2 7.9 10.9 0.57 10.7 4.9 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4890) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks17.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks17.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks17.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks17.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CFC PF09443.10 NODE_45512_length_430_cov_127.762025_g37734_i0forward_frame_3 - 4 7.4 8.9 0.46 10.4 0.9 2.6 3 0 0 3 3 3 0 Cripto_Frl-1_Cryptic (CFC) UPF0147 PF03685.13 NODE_45510_length_430_cov_141.878481_g37732_i0forward_frame_2 - 0.03 14.4 1.2 0.03 14.4 1.2 1.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0147) TetR_C_9 PF14514.6 NODE_45505_length_430_cov_166.156962_g37727_i0reverse_frame_2 - 0.14 12.3 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain MFS_1 PF07690.16 NODE_45504_length_430_cov_166.182278_g37726_i0reverse_frame_2 - 0.00029 19.9 0.0 0.00029 19.9 0.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4687 PF15747.5 NODE_45499_length_430_cov_243.260759_g37721_i0forward_frame_2 - 0.048 14.1 2.3 0.077 13.5 2.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4687) SLATT_2 PF18183.1 NODE_45499_length_430_cov_243.260759_g37721_i0forward_frame_2 - 0.23 11.2 3.8 0.25 11.1 3.1 1.4 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 2 DUF1506 PF07405.11 NODE_45479_length_431_cov_1.638889_g37705_i0reverse_frame_3 - 0.064 13.4 1.0 0.16 12.1 0.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1506) DUF4632 PF15451.6 NODE_45473_length_431_cov_2.694444_g37699_i0reverse_frame_2 - 0.078 13.1 3.3 3.2 7.9 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4632) DUF2883 PF11097.8 NODE_45473_length_431_cov_2.694444_g37699_i0reverse_frame_2 - 0.1 12.7 0.3 6.3 7.0 0.0 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2883) DUF2682 PF10909.8 NODE_45472_length_431_cov_2.785354_g37698_i0forward_frame_3 - 0.021 15.3 3.1 0.21 12.1 1.8 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2682) Topoisom_bac PF01131.20 NODE_45470_length_431_cov_2.939394_g37696_i0reverse_frame_3 - 0.22 10.5 0.0 0.27 10.2 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase DnaJ PF00226.31 NODE_45470_length_431_cov_2.939394_g37696_i0reverse_frame_2 - 0.041 14.0 0.0 0.066 13.4 0.0 1.3 1 0 0 1 1 1 0 DnaJ domain 3HCDH_N PF02737.18 NODE_45469_length_431_cov_2.954545_g37695_i0reverse_frame_2 - 9.7e-31 107.0 0.4 1.2e-30 106.7 0.4 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 NODE_45469_length_431_cov_2.954545_g37695_i0reverse_frame_2 - 4.6e-20 72.0 0.0 7e-20 71.5 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Pectinesterase PF01095.19 NODE_45469_length_431_cov_2.954545_g37695_i0reverse_frame_2 - 0.13 10.9 0.1 0.17 10.6 0.1 1.1 1 0 0 1 1 1 0 Pectinesterase HTH_1 PF00126.27 NODE_45469_length_431_cov_2.954545_g37695_i0forward_frame_3 - 0.048 13.6 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF547 PF04784.14 NODE_45468_length_431_cov_3.075758_g37694_i0reverse_frame_3 - 0.31 11.1 2.7 1.9 8.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function, DUF547 FSA_C PF10479.9 NODE_45461_length_431_cov_19.631313_g37687_i0reverse_frame_2 - 2.1 6.3 14.6 2.3 6.3 14.6 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Wzy_C PF04932.15 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_3 - 0.16 11.6 0.7 0.17 11.5 0.7 1.2 1 0 0 1 1 1 0 O-Antigen ligase DUF2207 PF09972.9 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_3 - 0.23 10.2 3.0 0.28 9.9 3.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF21 PF01595.20 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_3 - 0.46 10.2 6.9 0.71 9.6 6.9 1.2 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain DUF3043 PF11241.8 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_3 - 2.2 8.3 6.8 2.6 8.0 6.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) AC_N PF16214.5 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_3 - 2.8 7.0 8.3 2.9 6.9 8.3 1.2 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Apt1 PF10351.9 NODE_45461_length_431_cov_19.631313_g37687_i0forward_frame_2 - 0.041 12.7 7.0 0.036 12.9 7.0 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Kinesin PF00225.23 NODE_45450_length_431_cov_89.325758_g37676_i0reverse_frame_2 - 5.3e-16 58.4 0.0 6.7e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Apt1 PF10351.9 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 0.11 11.3 11.0 0.11 11.3 11.0 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain PSK PF06404.12 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 0.12 13.4 2.0 0.6 11.2 2.0 2.0 1 1 0 1 1 1 0 Phytosulfokine precursor protein (PSK) Macoilin PF09726.9 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 0.34 9.4 10.5 0.36 9.3 10.5 1.0 1 0 0 1 1 1 0 Macoilin family SPX PF03105.19 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 4.1 7.2 12.4 4.8 7.0 12.4 1.0 1 0 0 1 1 1 0 SPX domain Dicty_REP PF05086.12 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 4.4 5.2 7.7 4.4 5.2 7.7 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein SOG2 PF10428.9 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 4.9 6.2 21.6 5.8 6.0 21.6 1.0 1 0 0 1 1 1 0 RAM signalling pathway protein Hamartin PF04388.12 NODE_45449_length_431_cov_91.098485_g37675_i0forward_frame_3 - 9.5 4.7 13.2 9.4 4.8 13.2 1.0 1 0 0 1 1 1 0 Hamartin protein ZF-HD_dimer PF04770.12 NODE_45444_length_431_cov_99.729798_g37670_i0reverse_frame_2 - 0.039 14.3 1.4 0.09 13.1 0.7 1.9 1 1 0 1 1 1 0 ZF-HD protein dimerisation region DUF883 PF05957.13 NODE_45444_length_431_cov_99.729798_g37670_i0reverse_frame_2 - 0.11 13.1 6.2 0.37 11.4 6.2 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Phasin_2 PF09361.10 NODE_45444_length_431_cov_99.729798_g37670_i0reverse_frame_2 - 2.4 8.5 11.8 0.75 10.1 6.4 2.3 2 1 1 3 3 3 0 Phasin protein Ribonuclease_T2 PF00445.18 NODE_45442_length_431_cov_110.090909_g37668_i0forward_frame_3 - 1.5e-14 54.7 2.2 2.3e-14 54.1 2.2 1.3 1 0 0 1 1 1 1 Ribonuclease T2 family Furin-like_2 PF15913.5 NODE_45442_length_431_cov_110.090909_g37668_i0forward_frame_3 - 5.3e-06 26.5 0.9 1.1e-05 25.5 0.8 1.6 1 1 0 1 1 1 1 Furin-like repeat, cysteine-rich PriCT_2 PF08707.11 NODE_45442_length_431_cov_110.090909_g37668_i0forward_frame_3 - 0.029 14.7 0.6 0.052 13.9 0.4 1.4 1 1 0 1 1 1 0 Primase C terminal 2 (PriCT-2) Coagulase PF08764.10 NODE_45441_length_431_cov_119.800505_g37667_i0forward_frame_2 - 0.012 15.8 2.2 0.014 15.6 2.2 1.2 1 0 0 1 1 1 0 Staphylococcus aureus coagulase DUF2115 PF09888.9 NODE_45441_length_431_cov_119.800505_g37667_i0forward_frame_2 - 0.051 14.1 1.1 0.073 13.6 1.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) Mlh1_C PF16413.5 NODE_45439_length_431_cov_156.207071_g37665_i0reverse_frame_3 - 1.2e-07 31.4 0.0 1.5e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 DNA mismatch repair protein Mlh1 C-terminus DUF3953 PF13129.6 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.0025 17.5 6.2 2.1 8.2 0.1 3.9 4 0 0 4 4 4 2 Protein of unknown function (DUF3953) DUF4910 PF16254.5 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.0058 15.5 1.0 1.6 7.5 0.0 3.5 1 1 3 4 4 4 1 Domain of unknown function (DUF4910) DUF4723 PF15851.5 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.069 13.3 8.6 5.9 7.1 0.1 4.3 5 0 0 5 5 5 0 Domain of unknown function (DUF4723) YiaAB PF05360.14 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.073 13.3 3.5 39 4.6 0.0 3.7 4 0 0 4 4 4 0 yiaA/B two helix domain DUF347 PF03988.12 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.44 10.8 1.8 58 4.0 0.0 3.1 3 0 0 3 3 3 0 Repeat of Unknown Function (DUF347) DUF1538 PF07556.11 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 0.68 9.2 5.3 1.7 7.9 0.1 2.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1538) Ninjurin PF04923.12 NODE_45436_length_431_cov_224.500000_g37662_i0reverse_frame_2 - 2.9 7.9 6.3 42 4.2 0.1 3.4 1 1 2 3 3 3 0 Ninjurin Alginate_exp PF13372.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_3 - 0.0002 20.2 2.2 5.4 5.7 0.0 3.9 4 0 0 4 4 4 3 Alginate export DUF3692 PF12469.8 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_3 - 0.0043 17.3 1.5 42 4.4 0.0 4.5 4 1 1 5 5 5 1 CRISPR-associated protein PanZ PF12568.8 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_3 - 0.01 15.5 0.6 31 4.3 0.0 4.0 3 1 1 4 4 4 0 Acetyltransferase (GNAT) domain, PanZ DUF3084 PF11283.8 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_3 - 0.71 9.9 7.0 66 3.6 0.1 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF3084) Ank_2 PF12796.7 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 1.3e-42 144.2 6.7 4.5e-16 59.2 0.6 2.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 1.5e-30 105.1 2.7 8.6e-09 35.8 0.0 3.2 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 6.1e-25 84.6 0.1 0.00022 21.4 0.0 5.0 5 0 0 5 5 5 4 Ankyrin repeat Ank_5 PF13857.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 8.3e-18 64.2 3.4 0.0061 16.8 0.0 4.9 2 2 2 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 9.2e-18 63.8 0.9 0.0043 17.4 0.0 4.9 5 0 0 5 5 5 4 Ankyrin repeat DUF2170 PF09938.9 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.0044 16.7 0.0 9.2 6.0 0.0 3.5 1 1 3 4 4 4 2 Uncharacterized protein conserved in bacteria (DUF2170) DUF1830 PF08865.11 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.011 15.7 0.0 0.69 10.0 0.0 2.7 3 1 1 4 4 4 0 Domain of unknown function (DUF1830) Cyclin_N PF00134.23 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.014 15.2 0.1 20 4.9 0.0 3.4 1 1 3 4 4 4 0 Cyclin, N-terminal domain Acyl-CoA_dh_2 PF08028.11 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.035 14.4 9.9 1 9.7 1.2 3.4 1 1 3 4 4 4 0 Acyl-CoA dehydrogenase, C-terminal domain PUB_1 PF18486.1 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.039 13.8 3.2 10 6.1 0.0 3.9 5 0 0 5 5 5 0 PNGase/UBA- or UBX-containing domain Imm2 PF14426.6 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.056 13.5 0.2 52 4.0 0.0 3.5 4 0 0 4 4 4 0 Immunity protein Imm2 PEGA PF08308.11 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.083 12.8 0.0 35 4.4 0.0 2.9 3 0 0 3 3 3 0 PEGA domain DUF2560 PF10834.8 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 0.16 12.2 6.6 15 5.9 0.1 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2560) Paxillin PF03535.13 NODE_45436_length_431_cov_224.500000_g37662_i0forward_frame_2 - 6.3 6.6 5.1 24 4.7 0.0 3.3 1 1 3 4 4 4 0 Paxillin family Arv1 PF04161.13 NODE_45435_length_431_cov_226.479798_g37661_i0forward_frame_3 - 0.031 14.5 6.2 0.035 14.3 6.2 1.1 1 0 0 1 1 1 0 Arv1-like family Calcyon PF06387.11 NODE_45435_length_431_cov_226.479798_g37661_i0forward_frame_2 - 0.74 9.8 3.4 0.91 9.5 0.1 2.0 2 0 0 2 2 2 0 D1 dopamine receptor-interacting protein (calcyon) Response_reg PF00072.24 NODE_45416_length_432_cov_2.060453_g37643_i0reverse_frame_3 - 1.9e-05 24.8 0.0 3.5e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 NODE_45416_length_432_cov_2.060453_g37643_i0reverse_frame_2 - 5.5e-09 36.5 0.2 2.2e-08 34.6 0.2 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 NODE_45416_length_432_cov_2.060453_g37643_i0reverse_frame_2 - 0.0017 18.2 0.1 0.0023 17.8 0.1 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YfiO PF13525.6 NODE_45412_length_432_cov_2.609572_g37639_i0reverse_frame_2 - 0.027 14.2 0.1 0.03 14.0 0.1 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein TPR_18 PF13512.6 NODE_45412_length_432_cov_2.609572_g37639_i0reverse_frame_2 - 0.028 14.5 0.6 0.042 13.9 0.5 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat DUF5470 PF17564.2 NODE_45412_length_432_cov_2.609572_g37639_i0forward_frame_2 - 0.2 11.9 1.0 0.37 11.0 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5470) Exo_endo_phos PF03372.23 NODE_45407_length_432_cov_3.596977_g37634_i0forward_frame_2 - 0.00011 21.8 0.0 0.00011 21.8 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family ZZ PF00569.17 NODE_45405_length_432_cov_3.836272_g37632_i0forward_frame_3 - 2.1e-06 27.4 13.2 2.1e-06 27.4 13.2 2.1 2 0 0 2 2 2 1 Zinc finger, ZZ type Bcr-Abl_Oligo PF09036.10 NODE_45405_length_432_cov_3.836272_g37632_i0forward_frame_3 - 0.031 14.3 0.8 0.06 13.4 0.7 1.5 1 1 0 1 1 1 0 Bcr-Abl oncoprotein oligomerisation domain DUF5033 PF16436.5 NODE_45405_length_432_cov_3.836272_g37632_i0forward_frame_3 - 0.12 12.3 0.2 0.14 12.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5033) YtzH PF14165.6 NODE_45405_length_432_cov_3.836272_g37632_i0forward_frame_3 - 0.69 10.3 3.2 0.25 11.7 0.7 1.5 2 0 0 2 2 2 0 YtzH-like protein DUF3488 PF11992.8 NODE_45400_length_432_cov_46.088161_g37627_i0reverse_frame_3 - 0.22 10.5 4.3 0.25 10.3 4.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) HTH_3 PF01381.22 NODE_45400_length_432_cov_46.088161_g37627_i0forward_frame_3 - 4.6e-08 33.0 0.0 7.8e-08 32.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 NODE_45400_length_432_cov_46.088161_g37627_i0forward_frame_3 - 0.0028 17.6 0.1 0.005 16.8 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 NODE_45400_length_432_cov_46.088161_g37627_i0forward_frame_3 - 0.0044 16.8 0.0 0.0083 16.0 0.0 1.4 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_26 PF13443.6 NODE_45400_length_432_cov_46.088161_g37627_i0forward_frame_3 - 0.078 13.4 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF1294 PF06961.13 NODE_45396_length_432_cov_64.435768_g37623_i0reverse_frame_2 - 1.5e-20 73.1 0.3 2.4e-20 72.5 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1294) zf-4CXXC_R1 PF10497.9 NODE_45396_length_432_cov_64.435768_g37623_i0reverse_frame_2 - 0.093 13.0 4.6 0.043 14.0 2.6 1.5 2 0 0 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Zn_ribbon_SprT PF17283.2 NODE_45396_length_432_cov_64.435768_g37623_i0reverse_frame_2 - 0.3 11.0 10.0 0.11 12.5 3.5 3.1 3 1 0 3 3 3 0 SprT-like zinc ribbon domain Exonuc_VII_L PF02601.15 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.0036 16.9 10.9 0.0053 16.4 10.8 1.3 1 1 0 1 1 1 1 Exonuclease VII, large subunit Macoilin PF09726.9 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.03 12.9 12.0 0.034 12.7 12.0 1.1 1 0 0 1 1 1 0 Macoilin family ApoO PF09769.9 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.29 11.1 1.7 0.34 10.9 0.6 1.8 1 1 1 2 2 2 0 Apolipoprotein O Golgin_A5 PF09787.9 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.49 9.8 15.2 0.13 11.7 11.9 1.6 1 1 0 1 1 1 0 Golgin subfamily A member 5 FUSC PF04632.12 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.9 8.0 10.5 1.1 7.7 10.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family YabA PF06156.13 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.96 10.1 13.0 12 6.6 8.7 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Spc7 PF08317.11 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 0.97 8.2 15.4 1.6 7.6 15.4 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein KfrA_N PF11740.8 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 1.5 9.5 15.6 5 7.8 15.5 1.9 1 1 0 1 1 1 0 Plasmid replication region DNA-binding N-term RF-1 PF00472.20 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 1.9 8.5 10.9 3.1 7.8 10.9 1.4 1 0 0 1 1 1 0 RF-1 domain TolA_bind_tri PF16331.5 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 4 7.6 15.6 0.91 9.6 10.5 2.1 2 0 0 2 2 2 0 TolA binding protein trimerisation OmpH PF03938.14 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 5 7.4 17.1 3.9 7.8 14.9 1.8 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) Nup54_C PF18437.1 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 5.4 7.0 9.5 1 9.3 2.8 2.3 2 0 0 2 2 2 0 Nup54 C-terminal interacting domain COG2 PF06148.11 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 5.5 7.1 9.3 2.9 8.0 6.6 1.8 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 APG6_N PF17675.1 NODE_45390_length_432_cov_77.498741_g37617_i0forward_frame_3 - 5.7 7.5 21.3 24 5.4 19.9 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region EF-hand_6 PF13405.6 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 7.6e-08 31.7 0.2 0.022 14.7 0.0 2.7 2 1 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 2.5e-06 27.9 1.7 8.4e-05 22.9 0.4 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 4.9e-06 25.7 2.3 0.013 15.0 0.1 2.8 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 3.8e-05 23.0 4.9 0.21 11.1 0.1 3.6 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_3 - 0.00013 21.8 1.7 0.072 13.0 0.1 2.8 2 1 0 2 2 2 2 EF-hand domain pair TGase_elicitor PF16683.5 NODE_45386_length_432_cov_93.080605_g37613_i0forward_frame_2 - 0.2 10.4 4.3 0.24 10.1 4.3 1.1 1 0 0 1 1 1 0 Transglutaminase elicitor AvrPphF-ORF-2 PF09143.10 NODE_45384_length_432_cov_101.785894_g37611_i0forward_frame_3 - 0.16 11.9 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 AvrPphF-ORF-2 RR_TM4-6 PF06459.12 NODE_45373_length_432_cov_163.123426_g37600_i0reverse_frame_2 - 4.7 7.0 18.2 5.2 6.8 18.2 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF5401 PF17380.2 NODE_45373_length_432_cov_163.123426_g37600_i0reverse_frame_2 - 6.2 4.8 27.1 6 4.8 27.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) U79_P34 PF03064.16 NODE_45373_length_432_cov_163.123426_g37600_i0reverse_frame_2 - 7.2 5.9 24.2 11 5.3 24.2 1.4 1 1 0 1 1 1 0 HSV U79 / HCMV P34 NUDIX PF00293.28 NODE_45371_length_432_cov_181.768262_g37598_i0forward_frame_2 - 1.8e-05 24.8 0.0 2.8e-05 24.2 0.0 1.3 1 1 0 1 1 1 1 NUDIX domain RCC1_2 PF13540.6 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_3 - 0.0011 18.7 7.4 0.32 10.8 0.4 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Glyco_hydro_88 PF07470.13 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_3 - 0.0021 17.2 0.1 2.6 7.0 0.0 2.7 3 0 0 3 3 3 2 Glycosyl Hydrolase Family 88 DUF2664 PF10867.8 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_3 - 0.055 13.9 0.7 28 5.2 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2664) UVR PF02151.19 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_3 - 0.22 11.3 1.2 95 2.9 0.0 3.3 3 0 0 3 3 3 0 UvrB/uvrC motif HemN_C PF06969.16 NODE_45369_length_432_cov_241.037783_g37596_i0reverse_frame_2 - 0.18 11.9 0.0 28 4.9 0.0 2.4 2 0 0 2 2 2 0 HemN C-terminal domain MyTH4 PF00784.17 NODE_45369_length_432_cov_241.037783_g37596_i0forward_frame_3 - 0.33 11.5 5.4 2.4 8.7 0.2 3.0 3 0 0 3 3 3 0 MyTH4 domain PSP1 PF04468.12 NODE_45362_length_432_cov_39147.314861_g37591_i0reverse_frame_2 - 0.048 13.9 0.7 0.11 12.8 0.7 1.6 1 0 0 1 1 1 0 PSP1 C-terminal conserved region Palm_thioest PF02089.15 ORF96367 - 2.5e-13 50.4 0.0 2.9e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Abhydrolase_2 PF02230.16 ORF96367 - 0.15 11.8 0.0 2.2 8.0 0.0 2.0 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Palm_thioest PF02089.15 ORF96127 - 2.5e-13 50.4 0.0 2.9e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Abhydrolase_2 PF02230.16 ORF96127 - 0.15 11.8 0.0 2.2 8.0 0.0 2.0 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase DUF4033 PF13225.6 ORF95289 - 0.047 13.7 1.7 0.047 13.7 1.7 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4033) eIF-4B PF06273.11 ORF93795 - 0.39 9.7 4.6 0.45 9.5 4.6 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B IGPD PF00475.18 ORF93436 - 0.051 13.9 0.0 0.065 13.5 0.0 1.2 1 0 0 1 1 1 0 Imidazoleglycerol-phosphate dehydratase Gln_deamidase_2 PF18626.1 ORF92606 - 0.11 12.7 0.9 0.17 12.2 0.9 1.3 1 0 0 1 1 1 0 Glutaminase SNARE PF05739.19 ORF8798 - 5.7e-06 26.2 0.5 1.3e-05 25.0 0.0 1.9 2 0 0 2 2 2 1 SNARE domain CBAH PF02275.18 ORF8798 - 0.0073 16.0 2.0 0.0081 15.8 2.0 1.2 1 0 0 1 1 1 1 Linear amide C-N hydrolases, choloylglycine hydrolase family CENP-N PF05238.13 ORF8798 - 0.016 14.5 0.6 0.019 14.3 0.6 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like OPA3 PF07047.12 ORF8798 - 0.065 13.0 0.5 0.11 12.3 0.3 1.4 1 1 0 1 1 1 0 Optic atrophy 3 protein (OPA3) DUF1451 PF07295.11 ORF8798 - 0.12 12.4 3.0 0.16 12.0 3.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain YscO-like PF16789.5 ORF8798 - 0.51 10.4 9.8 0.67 10.0 9.8 1.3 1 0 0 1 1 1 0 YscO-like protein Synaptobrevin PF00957.21 ORF8798 - 0.8 9.5 8.8 0.34 10.7 5.8 1.9 1 1 0 1 1 1 0 Synaptobrevin HAUS6_N PF14661.6 ORF8798 - 0.95 9.0 6.2 1.2 8.7 6.2 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus KELK PF15796.5 ORF8798 - 2.2 8.8 8.0 1.1 9.8 1.4 2.4 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase FAM76 PF16046.5 ORF8798 - 3.1 7.1 8.3 3.9 6.7 8.3 1.0 1 0 0 1 1 1 0 FAM76 protein MurB_C PF02873.16 ORF86593 - 2.8e-38 130.7 0.0 3.3e-38 130.4 0.0 1.1 1 0 0 1 1 1 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Myosin_tail_1 PF01576.19 ORF8627 - 0.00042 18.3 20.4 0.00045 18.2 20.4 1.1 1 0 0 1 1 1 1 Myosin tail DivIC PF04977.15 ORF8627 - 0.007 16.1 3.0 0.007 16.1 3.0 2.8 1 1 2 3 3 3 2 Septum formation initiator ATG16 PF08614.11 ORF8627 - 0.019 15.2 20.2 0.025 14.8 20.2 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) SlyX PF04102.12 ORF8627 - 0.075 13.7 11.5 0.071 13.7 4.1 2.6 1 1 1 2 2 2 0 SlyX DUF4407 PF14362.6 ORF8627 - 0.25 10.7 16.6 0.35 10.2 16.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Fez1 PF06818.15 ORF8627 - 0.28 11.6 22.2 0.19 12.1 20.4 1.6 1 1 1 2 2 2 0 Fez1 Herpes_UL6 PF01763.16 ORF8627 - 0.37 9.3 9.5 0.42 9.1 9.5 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like DUF3584 PF12128.8 ORF8627 - 0.38 8.2 19.5 0.4 8.1 19.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF1192 PF06698.11 ORF8627 - 0.51 10.4 8.0 3 8.0 0.4 2.9 2 2 0 2 2 2 0 Protein of unknown function (DUF1192) DUF641 PF04859.12 ORF8627 - 0.65 10.3 17.2 0.34 11.2 14.9 1.8 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) Pox_A_type_inc PF04508.12 ORF8627 - 0.75 9.7 12.0 5.8 6.9 0.1 4.6 4 0 0 4 4 4 0 Viral A-type inclusion protein repeat ZYG-11_interact PF05884.12 ORF8627 - 1 8.7 3.2 2 7.8 3.2 1.5 1 1 1 2 2 2 0 Interactor of ZYG-11 HD_2 PF12917.7 ORF8627 - 1.1 9.0 9.9 1.5 8.5 9.7 1.3 1 1 0 1 1 1 0 HD containing hydrolase-like enzyme APG6_N PF17675.1 ORF8627 - 2.6 8.6 26.1 4.2 7.9 26.1 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region Atg14 PF10186.9 ORF8627 - 3.1 6.8 20.6 3.4 6.7 20.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 XRN_M PF17846.1 ORF8627 - 4 6.3 11.1 4.9 6.0 11.1 1.2 1 0 0 1 1 1 0 Xrn1 helical domain TMF_DNA_bd PF12329.8 ORF8627 - 4.1 7.5 32.5 0.04 13.9 21.2 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding PNPase PF03726.14 ORF8627 - 4.2 7.9 13.9 19 5.8 13.9 2.0 1 1 0 1 1 1 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain Exonuc_VII_L PF02601.15 ORF8627 - 5.3 6.5 13.5 6 6.3 13.5 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4239 PF14023.6 ORF8627 - 8.1 6.1 6.3 31 4.2 6.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4239) NPV_P10 PF05531.12 ORF8627 - 9.1 6.8 10.2 0.88 10.1 3.0 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein UPF0242 PF06785.11 ORF8627 - 9.3 6.3 26.9 12 5.9 26.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Synaptobrevin PF00957.21 ORF86004 - 6.2 6.7 6.1 12 5.7 6.1 1.5 1 0 0 1 1 1 0 Synaptobrevin OsmC PF02566.19 ORF85521 - 4.1e-19 68.9 0.1 5.4e-19 68.5 0.1 1.1 1 0 0 1 1 1 1 OsmC-like protein EELM2 PF15863.5 ORF84732 - 0.1 12.7 0.3 0.13 12.4 0.3 1.3 1 0 0 1 1 1 0 Extended EGL-27 and MTA1 homology domain DUF2694 PF10904.8 ORF84071 - 0.24 11.5 1.6 0.46 10.6 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2694) ADIP PF11559.8 ORF83193 - 9.7e-15 55.0 14.6 1.1e-14 54.8 14.6 1.0 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF4403 PF14356.6 ORF83193 - 0.031 13.0 4.2 0.38 9.4 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4403) HrpB7 PF09486.10 ORF83193 - 0.051 14.0 6.7 1.1 9.7 0.7 2.1 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) Seadorna_VP6 PF07407.11 ORF83193 - 1.3 7.9 10.4 0.93 8.4 9.0 1.5 1 1 0 1 1 1 0 Seadornavirus VP6 protein DUF4407 PF14362.6 ORF83193 - 9.3 5.5 10.1 11 5.3 10.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Fe_bilin_red PF05996.12 ORF82663 - 0.065 12.9 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Ferredoxin-dependent bilin reductase DcuC PF03606.15 ORF822 - 0.00019 20.0 0.0 0.00021 19.9 0.0 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier EpsG PF14897.6 ORF822 - 0.027 13.8 6.6 0.056 12.7 6.6 1.5 1 1 0 1 1 1 0 EpsG family 7tm_1 PF00001.21 ORF822 - 0.11 11.8 0.0 0.16 11.3 0.0 1.4 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) Pkinase PF00069.25 ORF81539 - 1e-12 48.0 0.0 1.4e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF81539 - 0.00024 20.5 0.0 0.00031 20.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase SesA PF17107.5 ORF81370 - 0.0034 17.6 0.7 0.0046 17.1 0.7 1.2 1 0 0 1 1 1 1 N-terminal domain on NACHT_NTPase and P-loop NTPases P16-Arc PF04699.14 ORF81370 - 0.8 10.2 4.1 0.16 12.4 0.2 1.7 2 0 0 2 2 2 0 ARP2/3 complex 16 kDa subunit (p16-Arc) DUF1476 PF07345.11 ORF81085 - 0.0089 16.4 5.2 49 4.4 0.0 4.7 2 2 3 5 5 5 3 ATPase inhibitor subunit zeta Acyl_transf_3 PF01757.22 ORF80810 - 0.1 11.6 7.5 0.18 10.9 7.5 1.5 1 1 0 1 1 1 0 Acyltransferase family O-FucT PF10250.9 ORF80111 - 3.6e-09 36.8 0.2 1.5e-08 34.7 0.2 1.7 1 1 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase EndIII_4Fe-2S PF10576.9 ORF78671 - 0.14 12.5 2.9 0.14 12.5 2.9 3.8 4 0 0 4 4 4 0 Iron-sulfur binding domain of endonuclease III PNPase_C PF12111.8 ORF77135 - 0.16 11.4 0.1 0.16 11.4 0.1 2.3 3 0 0 3 3 3 0 Polyribonucleotide phosphorylase C terminal HIT PF01230.23 ORF76464 - 6.3e-28 97.4 0.0 8.3e-28 97.0 0.0 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 ORF76464 - 1.9e-21 76.7 0.1 2.4e-21 76.3 0.1 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding DUF3144 PF11342.8 ORF7306 - 0.082 13.2 0.0 0.15 12.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3144) CtsR_C PF17727.1 ORF7306 - 0.12 12.5 0.0 0.22 11.7 0.0 1.4 1 0 0 1 1 1 0 CtsR C-terminal dimerization domain Tnp_zf-ribbon_2 PF13842.6 ORF72711 - 1.2 10.0 7.2 0.85 10.5 0.4 2.4 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon Cys_rich_CWC PF14375.6 ORF67079 - 0.051 14.0 1.8 0.051 14.0 1.8 1.8 2 0 0 2 2 2 0 Cysteine-rich CWC Methyltransf_22 PF13383.6 ORF66908 - 0.0089 15.6 4.1 0.21 11.1 0.4 2.0 1 1 1 2 2 2 2 Methyltransferase domain DUF842 PF05811.13 ORF668 - 0.14 11.8 2.2 0.94 9.2 0.9 2.0 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF842) OSTbeta PF15048.6 ORF66657 - 0.85 9.8 5.5 0.27 11.4 0.5 2.1 1 1 1 2 2 2 0 Organic solute transporter subunit beta protein DUF2682 PF10909.8 ORF66032 - 0.01 16.3 0.5 0.019 15.4 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2682) NBP1 PF08537.10 ORF65674 - 0.052 12.9 4.0 0.059 12.8 4.0 1.2 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 IFT57 PF10498.9 ORF65674 - 0.057 12.4 5.7 0.076 12.0 5.7 1.4 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 Rep_4 PF05797.11 ORF65674 - 0.058 12.5 1.3 0.07 12.2 1.3 1.1 1 0 0 1 1 1 0 Yeast trans-acting factor (REP1/REP2) Phage_GP20 PF06810.11 ORF65674 - 2.1 8.2 10.2 3.4 7.5 7.3 2.3 1 1 1 2 2 2 0 Phage minor structural protein GP20 DUF2203 PF09969.9 ORF65674 - 3.5 8.4 9.5 2 9.1 0.9 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) PRKG1_interact PF15898.5 ORF65674 - 9.3 7.2 12.1 2 9.3 5.8 2.1 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain FAM199X PF15814.5 ORF65288 - 0.64 9.0 8.2 0.76 8.8 8.2 1.0 1 0 0 1 1 1 0 Protein family FAM199X Prok-E2_E PF14462.6 ORF64902 - 0.12 12.2 0.1 0.17 11.7 0.1 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family E DUF569 PF04601.13 ORF64678 - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF569) eRF1_3 PF03465.15 ORF64399 - 4e-27 94.9 0.1 5e-27 94.6 0.1 1.1 1 0 0 1 1 1 1 eRF1 domain 3 SAYSvFN PF10260.9 ORF62440 - 1.5 8.8 6.1 12 5.9 0.5 2.8 2 1 0 2 2 2 0 Uncharacterized conserved domain (SAYSvFN) MFS_1 PF07690.16 ORF61290 - 3.1e-10 39.5 3.4 3.9e-10 39.2 3.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF61290 - 0.00011 21.2 0.3 0.00014 20.9 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 ORF61290 - 0.00012 21.0 0.1 0.00013 21.0 0.1 1.1 1 0 0 1 1 1 1 MFS_1 like family TRI12 PF06609.13 ORF61290 - 0.0013 17.3 0.1 0.0014 17.1 0.1 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) ATG22 PF11700.8 ORF61290 - 0.061 11.9 0.1 0.081 11.5 0.1 1.2 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like MFS_3 PF05977.13 ORF61290 - 0.17 10.2 2.1 0.4 9.0 2.1 1.6 1 1 0 1 1 1 0 Transmembrane secretion effector FUSC-like PF12805.7 ORF61290 - 0.32 10.0 1.3 0.51 9.4 0.4 1.6 2 0 0 2 2 2 0 FUSC-like inner membrane protein yccS Methyltransf_22 PF13383.6 ORF61274 - 0.066 12.8 0.4 0.084 12.4 0.4 1.1 1 0 0 1 1 1 0 Methyltransferase domain DUF4407 PF14362.6 ORF59716 - 1.2 8.4 5.4 1.6 8.0 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ALMT PF11744.8 ORF59716 - 4.9 5.9 9.4 6.2 5.5 9.4 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF4372 PF14294.6 ORF58305 - 0.027 14.6 0.1 0.047 13.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4372) VLPT PF07122.11 ORF57390 - 2 8.2 7.5 0.31 10.8 3.4 1.7 2 0 0 2 2 2 0 Variable length PCR target protein (VLPT) NACHT PF05729.12 ORF57236 - 1.4 8.8 3.9 1.2 9.0 0.1 2.0 1 1 1 2 2 2 0 NACHT domain TetR_C_20 PF17925.1 ORF57041 - 0.039 14.3 0.2 5.3 7.4 0.1 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PsbW PF07123.12 ORF57041 - 0.063 13.3 0.1 0.08 13.0 0.1 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) Thioredoxin PF00085.20 ORF55789 - 7.1e-18 64.5 0.0 8.8e-18 64.2 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 ORF55789 - 0.00064 19.2 0.1 0.00091 18.7 0.1 1.3 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF55789 - 0.0027 18.1 0.6 0.054 14.0 0.6 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_4 PF13462.6 ORF55789 - 0.0027 17.9 0.1 0.0058 16.8 0.2 1.5 1 1 1 2 2 2 1 Thioredoxin TraF PF13728.6 ORF55789 - 0.012 15.4 0.0 0.027 14.3 0.0 1.6 1 1 0 1 1 1 0 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF55789 - 0.034 14.5 0.0 0.14 12.5 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin-like DSBA PF01323.20 ORF55789 - 0.2 11.4 0.1 6.6 6.5 0.1 2.1 2 0 0 2 2 2 0 DSBA-like thioredoxin domain Auts2 PF15336.6 ORF55090 - 0.087 12.9 0.1 0.13 12.4 0.1 1.2 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Ank_4 PF13637.6 ORF55017 - 1.2e-12 48.1 0.0 0.0019 18.8 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF55017 - 8.8e-10 39.1 0.0 8e-05 23.2 0.0 2.4 1 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF55017 - 9.5e-10 37.9 0.0 0.019 15.5 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF55017 - 2.5e-05 24.5 0.0 0.58 10.7 0.0 3.5 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF55017 - 0.00023 21.4 0.2 0.052 13.9 0.0 2.8 2 2 0 2 2 2 1 Ankyrin repeats (many copies) PAS_8 PF13188.7 ORF54931 - 0.002 18.1 0.0 0.0033 17.4 0.0 1.3 1 0 0 1 1 1 1 PAS domain APG17 PF04108.12 ORF54931 - 0.0024 17.1 0.4 0.0033 16.6 0.4 1.2 1 0 0 1 1 1 1 Autophagy protein Apg17 PAS_3 PF08447.12 ORF54931 - 0.026 14.8 0.0 0.042 14.1 0.0 1.4 1 0 0 1 1 1 0 PAS fold PAS PF00989.25 ORF54931 - 0.029 14.4 0.0 0.039 13.9 0.0 1.2 1 0 0 1 1 1 0 PAS fold UvrD-helicase PF00580.21 ORF53775 - 0.16 11.4 18.6 0.19 11.2 18.6 1.0 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain SMC_ScpA PF02616.14 ORF53775 - 0.69 9.8 16.5 0.85 9.5 16.5 1.1 1 0 0 1 1 1 0 Segregation and condensation protein ScpA Hist_deacetyl PF00850.19 ORF53775 - 9.7 5.6 7.0 11 5.4 7.0 1.1 1 0 0 1 1 1 0 Histone deacetylase domain Palm_thioest PF02089.15 ORF5359 - 2.5e-13 50.4 0.0 2.9e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Abhydrolase_2 PF02230.16 ORF5359 - 0.15 11.8 0.0 2.2 8.0 0.0 2.0 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Chitin_synth_2 PF03142.15 ORF53241 - 0.17 10.5 6.3 0.18 10.4 6.3 1.1 1 0 0 1 1 1 0 Chitin synthase DUF2509 PF10713.9 ORF5001 - 0.033 14.3 1.2 0.075 13.2 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2509) CDC45 PF02724.14 ORF49062 - 0.042 12.2 5.7 0.047 12.0 5.7 1.0 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 ORF49062 - 0.083 11.1 8.5 0.092 11.0 8.5 1.0 1 0 0 1 1 1 0 Nop14-like family Sec62 PF03839.16 ORF49062 - 0.44 10.0 4.6 0.53 9.7 4.6 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 AIM3 PF17096.5 ORF49062 - 2.5 9.1 8.3 14 6.7 8.3 1.9 1 1 0 1 1 1 0 Altered inheritance of mitochondria protein 3 Zip PF02535.22 ORF49062 - 3.1 6.9 5.5 3.7 6.7 5.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF5560 PF17715.1 ORF49000 - 0.084 12.3 6.1 0.037 13.5 4.0 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5560) Toxin_21 PF08091.11 ORF48100 - 0.086 12.8 6.2 0.23 11.4 6.2 1.8 1 0 0 1 1 1 0 Spider insecticidal peptide ARD PF03079.14 ORF4784 - 0.045 13.9 3.6 0.097 12.9 1.8 1.9 1 1 1 2 2 2 0 ARD/ARD' family Pribosyltran PF00156.27 ORF47310 - 9.9e-21 73.9 0.1 1.1e-20 73.7 0.1 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF47310 - 0.075 12.5 0.0 0.082 12.3 0.0 1.1 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Cbl_N PF02262.16 ORF46752 - 0.0015 18.5 0.3 0.0022 18.0 0.3 1.2 1 0 0 1 1 1 1 CBL proto-oncogene N-terminal domain 1 Yae1_N PF09811.9 ORF46752 - 0.0033 17.1 1.9 0.0057 16.3 1.9 1.3 1 0 0 1 1 1 1 Essential protein Yae1, N terminal DUF948 PF06103.11 ORF46752 - 0.011 16.0 0.0 0.017 15.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) CorA PF01544.18 ORF46752 - 0.014 14.7 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Dynactin_p22 PF07426.11 ORF46752 - 0.022 14.6 0.6 0.042 13.7 0.6 1.5 1 0 0 1 1 1 0 Dynactin subunit p22 DZR PF12773.7 ORF46752 - 0.067 13.2 0.2 0.11 12.5 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon ABC2_membrane_3 PF12698.7 ORF46752 - 0.25 10.4 0.5 0.29 10.2 0.5 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein NYD-SP28 PF14772.6 ORF46752 - 1.6 8.8 5.7 0.8 9.8 1.9 2.2 2 1 0 2 2 2 0 Sperm tail TB PF00683.17 ORF46606 - 0.017 14.9 0.6 0.03 14.1 0.6 1.3 1 0 0 1 1 1 0 TB domain DUF2048 PF09752.9 ORF46367 - 0.17 10.9 0.9 0.24 10.4 0.9 1.1 1 0 0 1 1 1 0 Abhydrolase domain containing 18 CHD5 PF04420.14 ORF41113 - 2.3e-05 24.3 3.7 3.6e-05 23.7 3.7 1.6 1 1 0 1 1 1 1 CHD5-like protein GET2 PF08690.10 ORF41113 - 0.016 14.9 0.2 0.02 14.6 0.2 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 DUF872 PF05915.12 ORF41113 - 0.11 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) MFS_1 PF07690.16 ORF38114 - 2.3e-10 39.9 4.1 4.2e-10 39.1 3.2 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF38114 - 8.9e-05 21.5 0.0 9.9e-05 21.4 0.0 1.1 1 0 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 ORF38114 - 0.00028 19.9 0.6 0.00033 19.6 0.6 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter TRI12 PF06609.13 ORF38114 - 0.0012 17.4 0.1 0.0013 17.2 0.1 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 ORF38114 - 0.0044 15.6 1.6 0.0052 15.4 0.7 1.4 1 1 0 1 1 1 1 MFS/sugar transport protein Nuc_H_symport PF03825.16 ORF38114 - 0.085 11.8 0.1 0.11 11.4 0.1 1.2 1 0 0 1 1 1 0 Nucleoside H+ symporter DUF5385 PF17359.2 ORF34906 - 0.044 13.3 2.2 0.7 9.4 0.1 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5385) Saf_2TM PF18303.1 ORF34772 - 1.2 8.7 4.4 1.5 8.4 3.9 1.5 1 1 0 1 1 1 0 SAVED-fused 2TM effector domain Peptidase_C15 PF01470.17 ORF34210 - 5e-15 56.2 0.1 5.6e-15 56.0 0.1 1.0 1 0 0 1 1 1 1 Pyroglutamyl peptidase zf-C2H2_assoc2 PF16624.5 ORF34048 - 0.25 12.3 4.1 0.41 11.7 4.1 1.3 1 0 0 1 1 1 0 Unstructured region upstream of a zinc-finger DZR PF12773.7 ORF32189 - 0.0043 17.0 0.5 0.0069 16.4 0.5 1.4 1 0 0 1 1 1 1 Double zinc ribbon DUF5387 PF17361.2 ORF32189 - 0.014 15.1 0.2 0.017 14.8 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5387) zinc_ribbon_2 PF13240.6 ORF32189 - 0.036 13.8 7.5 0.1 12.4 7.5 1.8 1 1 0 1 1 1 0 zinc-ribbon domain zf_UBZ PF18439.1 ORF32189 - 0.11 12.1 0.9 2 8.1 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 ORF32189 - 0.18 11.3 9.0 1 8.9 9.0 2.1 1 1 0 1 1 1 0 zinc-ribbon domain PVL_ORF50 PF07768.11 ORF31580 - 0.0011 19.3 1.6 0.0011 19.3 1.6 1.7 1 1 1 2 2 2 1 PVL ORF-50-like family UPF0242 PF06785.11 ORF31580 - 0.021 15.0 6.3 0.021 15.0 6.3 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF31580 - 2.8 7.2 6.2 3.5 6.9 6.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Keratin_matx PF04579.12 ORF30860 - 0.15 12.4 6.3 0.26 11.7 0.4 2.4 2 0 0 2 2 2 0 Keratin, high-sulphur matrix protein Peptidase_C97 PF05903.14 ORF29736 - 9.8e-18 64.4 0.2 2.4e-17 63.2 0.1 1.6 2 0 0 2 2 2 1 PPPDE putative peptidase domain LRAT PF04970.13 ORF29736 - 0.11 12.8 0.1 0.21 11.9 0.0 1.5 2 0 0 2 2 2 0 Lecithin retinol acyltransferase Keratin_matx PF04579.12 ORF2904 - 0.15 12.4 6.3 0.26 11.7 0.4 2.4 2 0 0 2 2 2 0 Keratin, high-sulphur matrix protein CoaE PF01121.20 ORF28413 - 4.7e-17 62.2 0.1 6e-17 61.9 0.1 1.1 1 0 0 1 1 1 1 Dephospho-CoA kinase BioT2 PF15368.6 ORF28010 - 0.035 14.1 0.3 0.056 13.4 0.3 1.3 1 0 0 1 1 1 0 Spermatogenesis family BioT2 TGase_elicitor PF16683.5 ORF28010 - 5.6 5.6 8.8 6.2 5.5 8.8 1.1 1 0 0 1 1 1 0 Transglutaminase elicitor GhoS PF11080.8 ORF27951 - 6.5e-42 141.4 0.2 8.6e-42 141.0 0.2 1.2 1 0 0 1 1 1 1 Endoribonuclease GhoS Keratin_matx PF04579.12 ORF2791 - 0.15 12.4 6.3 0.26 11.7 0.4 2.4 2 0 0 2 2 2 0 Keratin, high-sulphur matrix protein GST_C PF00043.25 ORF27349 - 1e-08 35.3 0.0 1.9e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF27349 - 5.2e-07 29.6 0.0 8.5e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF27349 - 5.5e-06 26.5 0.0 9.3e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF27349 - 0.19 11.5 0.0 1.3 8.8 0.0 2.0 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain PfkB PF00294.24 ORF26786 - 0.0023 17.3 0.0 0.0034 16.8 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase DUF2070 PF09843.9 ORF26286 - 0.32 9.2 7.7 0.36 9.1 7.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) 7tm_1 PF00001.21 ORF26286 - 0.37 10.1 11.4 0.054 12.8 6.8 1.7 1 1 1 2 2 2 0 7 transmembrane receptor (rhodopsin family) Promethin PF16015.5 ORF26286 - 0.53 10.2 13.1 0.98 9.4 13.1 1.5 1 1 0 1 1 1 0 Promethin Vpu PF00558.19 ORF26286 - 2 8.3 4.7 0.33 10.8 0.6 1.8 2 0 0 2 2 2 0 Vpu protein SM-ATX PF14438.6 ORF25929 - 0.001 19.2 0.1 0.0021 18.2 0.1 1.4 1 0 0 1 1 1 1 Ataxin 2 SM domain Ribosomal_L19e PF01280.20 ORF24753 - 0.012 15.7 4.5 0.019 15.0 4.5 1.3 1 0 0 1 1 1 0 Ribosomal protein L19e zf-C3HC4_3 PF13920.6 ORF24391 - 0.00071 19.4 9.4 0.0012 18.6 9.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) DUF1451 PF07295.11 ORF24391 - 0.0043 17.1 7.1 0.0047 17.0 5.7 1.7 2 0 0 2 2 2 1 Zinc-ribbon containing domain zf-RING_4 PF14570.6 ORF24391 - 0.13 12.1 12.0 0.26 11.1 12.0 1.5 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Ribosomal_L40e PF01020.17 ORF24391 - 0.16 11.9 4.3 0.35 10.8 4.3 1.6 1 0 0 1 1 1 0 Ribosomal L40e family Prok-RING_4 PF14447.6 ORF24391 - 0.22 11.4 8.3 0.8 9.6 8.3 1.9 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF24391 - 0.31 11.0 11.9 0.23 11.4 10.5 1.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) HypA PF01155.19 ORF24391 - 0.34 10.9 5.8 0.42 10.7 5.3 1.4 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C3HC4_2 PF13923.6 ORF24391 - 0.61 10.0 10.0 1.1 9.2 10.0 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) JAB PF01398.21 ORF24080 - 7.2e-07 29.2 0.1 1e-06 28.7 0.1 1.2 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 ORF24080 - 3.3e-06 26.9 0.0 4e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain UPF0172 PF03665.13 ORF24080 - 0.041 13.9 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) Med16 PF11635.8 ORF23958 - 0.42 8.5 6.4 0.49 8.2 6.4 1.1 1 0 0 1 1 1 0 Mediator complex subunit 16 DUF1450 PF07293.11 ORF23845 - 0.0043 16.8 0.8 0.0043 16.8 0.8 1.8 2 1 1 3 3 3 1 Protein of unknown function (DUF1450) HAP1_N PF04849.13 ORF23775 - 0.0011 18.2 17.7 0.0013 18.0 17.7 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region ATG16 PF08614.11 ORF23775 - 0.0015 18.8 11.8 0.0021 18.3 11.8 1.3 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) TPR_MLP1_2 PF07926.12 ORF23775 - 0.0042 17.1 21.5 0.0075 16.3 20.9 1.8 1 1 0 1 1 1 1 TPR/MLP1/MLP2-like protein Seryl_tRNA_N PF02403.22 ORF23775 - 0.0042 17.3 16.4 0.0042 17.3 16.4 1.7 1 1 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Synaptobrevin PF00957.21 ORF23775 - 0.0056 16.4 3.0 0.0056 16.4 3.0 1.9 1 1 1 2 2 2 1 Synaptobrevin Golgin_A5 PF09787.9 ORF23775 - 0.0065 16.0 18.1 0.0076 15.7 18.1 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 Atg14 PF10186.9 ORF23775 - 0.011 14.9 15.5 0.013 14.6 15.5 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Lipoprotein_6 PF01441.19 ORF23775 - 0.017 15.1 8.7 0.021 14.9 8.5 1.3 1 1 0 1 1 1 0 Lipoprotein BicD PF09730.9 ORF23775 - 0.019 13.4 15.1 0.025 13.1 15.1 1.2 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D Tropomyosin_1 PF12718.7 ORF23775 - 0.024 14.8 23.7 0.043 14.0 21.1 2.4 2 1 0 2 2 2 0 Tropomyosin like Spc7 PF08317.11 ORF23775 - 0.029 13.3 17.7 0.035 13.0 17.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein RPW8 PF05659.11 ORF23775 - 0.035 13.8 16.9 0.91 9.2 1.2 2.2 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF4407 PF14362.6 ORF23775 - 0.052 12.9 10.1 0.36 10.2 9.8 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Sulfatase_C PF14707.6 ORF23775 - 0.066 13.9 9.2 0.64 10.8 5.1 2.7 1 1 1 2 2 2 0 C-terminal region of aryl-sulfatase PilJ PF13675.6 ORF23775 - 0.075 13.1 3.7 0.16 12.0 2.6 1.8 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term Lectin_N PF03954.14 ORF23775 - 0.084 12.6 7.3 0.42 10.3 5.4 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Exonuc_VII_L PF02601.15 ORF23775 - 0.084 12.4 9.7 0.1 12.2 9.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Prominin PF05478.11 ORF23775 - 0.095 10.6 11.5 0.098 10.6 11.5 1.0 1 0 0 1 1 1 0 Prominin TMCO5 PF14992.6 ORF23775 - 0.12 11.9 21.9 5.7 6.4 22.3 2.1 1 1 1 2 2 2 0 TMCO5 family Snapin_Pallidin PF14712.6 ORF23775 - 0.13 12.7 17.1 0.031 14.7 10.3 2.3 1 1 1 2 2 2 0 Snapin/Pallidin TolA_bind_tri PF16331.5 ORF23775 - 0.16 12.1 8.4 0.18 11.9 6.1 2.2 1 1 1 2 2 2 0 TolA binding protein trimerisation Jnk-SapK_ap_N PF09744.9 ORF23775 - 0.18 12.0 21.9 0.37 11.0 21.9 1.6 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF745 PF05335.13 ORF23775 - 0.23 11.2 8.8 0.28 10.9 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) CENP-H PF05837.12 ORF23775 - 0.23 11.9 15.6 0.11 13.0 12.5 1.8 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Nup88 PF10168.9 ORF23775 - 0.28 8.9 13.4 0.35 8.6 13.4 1.1 1 0 0 1 1 1 0 Nuclear pore component Fib_alpha PF08702.10 ORF23775 - 0.29 11.3 16.9 4.4 7.5 7.8 2.6 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family UPF0242 PF06785.11 ORF23775 - 0.38 10.8 20.9 0.48 10.5 20.9 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus COG2 PF06148.11 ORF23775 - 0.51 10.4 10.6 0.2 11.7 6.7 1.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF812 PF05667.11 ORF23775 - 0.53 9.1 20.9 0.59 9.0 20.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) APG6_N PF17675.1 ORF23775 - 0.72 10.4 24.8 1.6 9.2 24.8 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region Fzo_mitofusin PF04799.13 ORF23775 - 0.74 9.4 11.8 0.17 11.4 6.5 2.0 1 1 1 2 2 2 0 fzo-like conserved region TMPIT PF07851.13 ORF23775 - 0.79 8.9 17.4 0.61 9.3 15.7 1.6 1 1 1 2 2 2 0 TMPIT-like protein V_ATPase_I PF01496.19 ORF23775 - 0.81 7.5 14.0 1 7.2 14.0 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Mod_r PF07200.13 ORF23775 - 0.84 9.7 20.7 1.9 8.6 20.7 1.5 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein DUF2203 PF09969.9 ORF23775 - 0.91 10.3 12.7 1.3 9.7 4.3 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF2258 PF10015.9 ORF23775 - 0.98 9.6 4.4 0.37 10.9 1.3 2.0 2 1 0 2 2 1 0 Uncharacterized protein conserved in archaea (DUF2258) Tup_N PF08581.10 ORF23775 - 1.3 9.4 19.8 0.067 13.5 9.6 3.1 1 1 1 3 3 3 0 Tup N-terminal OmpH PF03938.14 ORF23775 - 1.3 9.4 26.1 61 3.9 26.1 2.2 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) HIP1_clath_bdg PF16515.5 ORF23775 - 1.4 9.5 16.3 2 9.1 15.7 1.6 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 HemX PF04375.14 ORF23775 - 1.4 8.1 12.3 1.6 7.9 11.7 1.4 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF724 PF05266.14 ORF23775 - 1.8 8.3 18.6 3.2 7.5 18.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DUF5082 PF16888.5 ORF23775 - 2 8.7 18.4 2.7 8.3 16.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DMPK_coil PF08826.10 ORF23775 - 2.1 8.5 15.4 0.78 9.9 6.8 2.9 1 1 2 3 3 3 0 DMPK coiled coil domain like VIR_N PF15912.5 ORF23775 - 2.5 7.6 8.5 2.9 7.4 8.5 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal DHR10 PF18595.1 ORF23775 - 2.5 8.2 19.6 9.4 6.3 18.9 1.9 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain GrpE PF01025.19 ORF23775 - 2.6 7.7 20.5 0.42 10.3 14.6 2.3 1 1 2 3 3 3 0 GrpE Uso1_p115_C PF04871.13 ORF23775 - 2.7 8.4 22.7 21 5.5 22.6 2.1 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region AAA_11 PF13086.6 ORF23775 - 3.1 7.5 12.0 3.7 7.2 12.0 1.1 1 0 0 1 1 1 0 AAA domain DUF1664 PF07889.12 ORF23775 - 3.3 7.8 9.9 3 7.9 3.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) TRPM_tetra PF16519.5 ORF23775 - 3.8 7.7 7.6 0.53 10.4 1.5 2.5 2 1 1 3 3 3 0 Tetramerisation domain of TRPM DUF2207 PF09972.9 ORF23775 - 4 6.1 11.9 4.5 5.9 11.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Tho2 PF11262.8 ORF23775 - 4.8 6.3 18.4 14 4.8 18.0 1.8 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF4337 PF14235.6 ORF23775 - 5.5 7.1 18.6 8 6.6 18.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) TMF_DNA_bd PF12329.8 ORF23775 - 5.8 7.0 26.4 1.4 9.0 15.0 3.2 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF3450 PF11932.8 ORF23775 - 5.9 6.1 16.7 17 4.6 14.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF4446 PF14584.6 ORF23775 - 6.7 6.7 14.6 3.2 7.7 8.5 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF4446) DUF4140 PF13600.6 ORF23775 - 7 7.2 8.6 50 4.4 8.6 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) YabA PF06156.13 ORF23775 - 7.1 7.3 14.8 25 5.6 14.8 2.0 1 1 0 1 1 1 0 Initiation control protein YabA FlaC_arch PF05377.11 ORF23775 - 7.9 7.0 13.0 0.7 10.3 4.7 2.9 1 1 3 4 4 3 0 Flagella accessory protein C (FlaC) EMP24_GP25L PF01105.24 ORF23775 - 8.8 6.2 12.0 64 3.4 12.0 2.0 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Ax_dynein_light PF10211.9 ORF23775 - 9 6.2 23.1 14 5.6 21.3 1.9 1 1 1 2 2 2 0 Axonemal dynein light chain Atypical_Card PF18461.1 ORF23774 - 0.031 14.5 0.1 0.043 14.0 0.1 1.3 1 0 0 1 1 1 0 Atypical caspase recruitment domain Peptidase_S8_N PF16361.5 ORF23774 - 0.08 13.4 0.1 0.14 12.6 0.1 1.4 1 0 0 1 1 1 0 N-terminal of Subtilase family MORN PF02493.20 ORF23273 - 0.001 18.8 2.0 0.001 18.8 2.0 4.6 5 1 0 5 5 5 3 MORN repeat DHHC PF01529.20 ORF22609 - 3.7e-28 98.3 9.2 4.3e-28 98.1 9.2 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase ADH_N PF08240.12 ORF22609 - 0.032 14.1 0.1 0.036 13.9 0.1 1.3 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain Motile_Sperm PF00635.26 ORF21953 - 0.0043 16.9 0.3 0.0071 16.2 0.3 1.4 1 0 0 1 1 1 1 MSP (Major sperm protein) domain Sulfotransfer_3 PF13469.6 ORF21725 - 0.05 14.0 0.2 0.12 12.7 0.0 1.7 2 1 0 2 2 2 0 Sulfotransferase family Sulfotransfer_1 PF00685.27 ORF21725 - 0.054 13.0 0.0 0.09 12.2 0.0 1.3 1 1 0 1 1 1 0 Sulfotransferase domain AAA_27 PF13514.6 ORF21725 - 0.067 12.8 0.0 0.081 12.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain Ribosomal_L22e PF01776.17 ORF21248 - 8.4e-38 129.1 7.0 1.1e-37 128.7 7.0 1.2 1 0 0 1 1 1 1 Ribosomal L22e protein family Rad4 PF03835.15 ORF21248 - 0.0059 16.3 0.2 0.0069 16.1 0.2 1.1 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain DUF2281 PF10047.9 ORF21248 - 0.079 13.7 0.7 7.7 7.3 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2281) DUF3449 PF11931.8 ORF21117 - 0.036 13.9 0.1 0.052 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) HEPN_Cthe2314 PF18730.1 ORF20772 - 0.086 12.9 6.5 1.1 9.3 6.3 2.2 1 1 0 1 1 1 0 Cthe_2314-like HEPN EELM2 PF15863.5 ORF17087 - 0.1 12.7 0.3 0.13 12.4 0.3 1.3 1 0 0 1 1 1 0 Extended EGL-27 and MTA1 homology domain DUF3948 PF13134.6 ORF16560 - 0.018 14.7 0.8 0.086 12.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3948) ANP PF00212.18 ORF16560 - 0.06 13.5 0.8 0.06 13.5 0.8 2.3 2 0 0 2 2 2 0 Atrial natriuretic peptide SIT PF15330.6 ORF16360 - 0.0099 16.3 0.0 0.016 15.6 0.0 1.3 1 0 0 1 1 1 1 SHP2-interacting transmembrane adaptor protein, SIT PepSY_TM_like_2 PF16357.5 ORF16360 - 0.026 14.5 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 Putative PepSY_TM-like PH PF00169.29 ORF152670 - 1.5e-18 67.2 0.2 2.1e-18 66.7 0.2 1.2 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF152670 - 4.2e-06 27.1 0.4 0.0001 22.7 0.4 2.1 1 1 0 1 1 1 1 Pleckstrin homology domain PH_3 PF14593.6 ORF152670 - 9.7e-06 25.6 0.1 2.8e-05 24.1 0.1 1.6 1 1 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF152670 - 4.1e-05 23.8 0.2 8.1e-05 22.8 0.2 1.4 1 1 0 1 1 1 1 Pleckstrin homology domain PH_13 PF16652.5 ORF152670 - 0.0011 18.8 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain PH_9 PF15410.6 ORF152670 - 0.052 13.9 0.2 0.24 11.8 0.2 1.8 1 1 0 1 1 1 0 Pleckstrin homology domain Occludin_ELL PF07303.13 ORF150343 - 0.037 14.7 1.4 2 9.2 0.1 2.2 2 0 0 2 2 2 0 Occludin homology domain FadR_C PF07840.12 ORF150058 - 0.14 12.0 2.9 0.71 9.8 0.4 2.0 1 1 0 2 2 2 0 FadR C-terminal domain MORN PF02493.20 ORF148921 - 2.1e-35 118.5 34.2 5.6e-07 29.1 0.8 7.1 7 0 0 7 7 7 7 MORN repeat Tudor_2 PF18104.1 ORF148921 - 0.0024 17.5 1.6 2.4 7.9 0.3 3.8 4 0 0 4 4 4 2 Jumonji domain-containing protein 2A Tudor domain DUF390 PF04094.14 ORF148665 - 5 5.3 10.2 5.2 5.2 10.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) HisKA_7TM PF16927.5 ORF146666 - 0.011 15.7 0.3 0.014 15.4 0.3 1.1 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase DUF3675 PF12428.8 ORF146666 - 0.044 14.3 1.1 0.06 13.9 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) DUF805 PF05656.14 ORF146666 - 3.1 8.3 5.7 4.6 7.7 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF805) FeoB_associated PF12669.7 ORF146666 - 7.8 7.0 9.3 4 7.9 0.6 2.4 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein SPC12 PF06645.13 ORF146666 - 8 6.6 6.3 53 4.0 6.3 2.0 1 1 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) KilA-N PF04383.13 ORF145018 - 0.088 12.7 1.4 0.089 12.6 0.4 1.6 2 0 0 2 2 2 0 KilA-N domain Cylicin_N PF15241.6 ORF145018 - 0.16 12.1 2.8 0.6 10.3 0.8 2.1 2 0 0 2 2 2 0 Cylicin N-terminus Ribosomal_S9 PF00380.19 ORF144322 - 1.1e-28 100.1 0.4 1.3e-28 99.9 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 NACHT PF05729.12 ORF142949 - 1.4 8.8 3.9 1.2 9.0 0.1 2.0 1 1 1 2 2 2 0 NACHT domain Atg14 PF10186.9 ORF142823 - 0.0073 15.4 0.0 0.012 14.7 0.0 1.3 1 1 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Spc110_C PF18520.1 ORF14184 - 0.5 10.0 0.1 0.5 10.0 0.1 2.5 2 0 0 2 2 2 0 Spindle pole body component 110 C-terminal domain DUF5058 PF16481.5 ORF141824 - 0.0023 17.7 1.1 0.0027 17.5 1.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5058) DUF3443 PF11925.8 ORF141344 - 0.1 11.4 0.0 0.12 11.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3443) AKAP95 PF04988.12 ORF141003 - 0.056 13.7 0.3 0.083 13.1 0.3 1.2 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) DUF5451 PF17532.2 ORF141003 - 0.089 13.1 0.8 0.11 12.7 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5451) MKLP1_Arf_bdg PF16540.5 ORF139145 - 0.01 15.9 0.3 0.015 15.4 0.3 1.2 1 0 0 1 1 1 0 Arf6-interacting domain of mitotic kinesin-like protein 1 Rhodanese PF00581.20 ORF137051 - 7.5e-17 61.8 0.0 9.3e-17 61.5 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain Baculo_Y142 PF04913.12 ORF137051 - 0.043 12.5 0.0 0.047 12.4 0.0 1.1 1 0 0 1 1 1 0 Baculovirus Y142 protein MNHE PF01899.16 ORF137051 - 0.058 13.1 0.0 0.077 12.8 0.0 1.1 1 0 0 1 1 1 0 Na+/H+ ion antiporter subunit NAD_binding_1 PF00175.21 ORF136155 - 8.8e-24 84.3 0.0 1.1e-23 83.9 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain YmgD PF16456.5 ORF136155 - 0.053 13.6 0.0 0.079 13.0 0.0 1.3 1 0 0 1 1 1 0 YmgD protein DAP10 PF07213.11 ORF133124 - 0.47 10.4 4.2 0.18 11.8 0.8 2.1 2 0 0 2 2 2 0 DAP10 membrane protein PsbY PF06298.11 ORF13229 - 1.2e-07 31.5 7.0 1.2e-07 31.5 7.0 2.4 2 0 0 2 2 2 1 Photosystem II protein Y (PsbY) STAS PF01740.21 ORF129488 - 0.052 13.2 0.5 0.1 12.3 0.4 1.5 1 1 0 1 1 1 0 STAS domain HEPN_Cthe2314 PF18730.1 ORF128035 - 0.086 12.9 6.5 1.1 9.3 6.3 2.2 1 1 0 1 1 1 0 Cthe_2314-like HEPN IMS_C PF11799.8 ORF126747 - 5.5e-16 59.3 0.1 6.5e-16 59.1 0.1 1.1 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain NBP1 PF08537.10 ORF126747 - 0.025 14.0 4.9 0.027 13.9 4.9 1.1 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 FliE PF02049.18 ORF126274 - 1.1 9.5 3.5 7.1 6.8 0.4 2.4 1 1 1 2 2 2 0 Flagellar hook-basal body complex protein FliE MPDZ_u10 PF16667.5 ORF125227 - 0.083 13.8 1.3 0.15 13.0 1.3 1.4 1 0 0 1 1 1 0 Unstructured region 10 on multiple PDZ protein DHHC PF01529.20 ORF125181 - 3.7e-28 98.3 9.2 4.3e-28 98.1 9.2 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase ADH_N PF08240.12 ORF125181 - 0.032 14.1 0.1 0.036 13.9 0.1 1.3 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain Glyco_transf_90 PF05686.12 ORF123339 - 1.2e-15 57.3 0.0 1.7e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 90 Glyco_trans_1_2 PF13524.6 ORF123339 - 0.004 17.5 0.0 0.0065 16.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 EF-hand_1 PF00036.32 ORF122798 - 3.2e-19 67.0 4.6 2.3e-05 23.6 0.0 3.4 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF122798 - 4.3e-15 54.3 0.4 4.6e-06 26.1 0.0 3.5 3 0 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF122798 - 7.6e-15 55.1 0.5 1e-09 38.7 0.4 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF122798 - 3.3e-11 42.9 2.8 0.00058 19.7 0.5 3.1 1 1 2 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF122798 - 3.9e-10 38.7 3.7 0.00016 21.0 0.0 3.7 3 1 0 3 3 3 2 EF hand EF-hand_4 PF12763.7 ORF122798 - 0.00013 21.8 4.5 0.11 12.4 0.1 2.7 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF122798 - 0.0033 17.7 0.0 0.0075 16.6 0.0 1.6 2 0 0 2 2 2 1 EF-hand domain tRNA_synt_1c_R1 PF04558.15 ORF122798 - 0.037 14.0 0.0 0.045 13.8 0.0 1.1 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 SPARC_Ca_bdg PF10591.9 ORF122798 - 0.12 12.7 0.2 12 6.3 0.0 2.2 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Asp PF00026.23 ORF120517 - 9.7e-14 51.5 0.2 1.2e-13 51.2 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF120517 - 6.1e-06 26.6 0.2 8.3e-06 26.1 0.2 1.2 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal PET PF06297.14 ORF12038 - 0.022 15.0 0.7 0.093 13.1 0.1 2.1 1 1 1 2 2 2 0 PET Domain PTS_EIIA_2 PF00359.22 ORF119351 - 1e-23 83.9 0.0 1.1e-23 83.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PNPase_C PF12111.8 ORF119317 - 0.16 11.4 0.1 0.16 11.4 0.1 2.3 3 0 0 3 3 3 0 Polyribonucleotide phosphorylase C terminal Sterol_MT_C PF08498.10 ORF119070 - 1e-15 57.7 0.0 1.5e-15 57.2 0.0 1.2 1 0 0 1 1 1 1 Sterol methyltransferase C-terminal MBF1 PF08523.10 ORF117473 - 7.9e-20 71.1 1.2 7.9e-20 71.1 1.2 1.6 2 0 0 2 2 2 1 Multiprotein bridging factor 1 HTH_3 PF01381.22 ORF117473 - 6.3e-11 42.2 0.3 1.1e-10 41.4 0.3 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 ORF117473 - 4.8e-05 23.6 0.0 8.6e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 ORF117473 - 0.00094 19.2 0.1 0.0015 18.5 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Ribosomal_L19e PF01280.20 ORF116842 - 0.034 14.2 0.1 0.051 13.6 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L19e Palm_thioest PF02089.15 ORF115227 - 2.5e-13 50.4 0.0 2.9e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Abhydrolase_2 PF02230.16 ORF115227 - 0.15 11.8 0.0 2.2 8.0 0.0 2.0 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase DUF5563 PF17718.1 ORF114241 - 0.36 10.4 4.5 0.15 11.6 1.5 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5563) TRH PF05438.12 ORF113671 - 0.024 14.4 0.1 0.032 14.0 0.1 1.2 1 0 0 1 1 1 0 Thyrotropin-releasing hormone (TRH) FAM183 PF14886.6 ORF112952 - 0.0096 16.6 0.1 0.014 16.1 0.1 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related TAP35_44 PF07265.11 ORF112442 - 0.075 13.0 3.0 0.19 11.8 3.0 1.7 1 1 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks180.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks180.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks180.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks180.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:09:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PSI_PsaJ PF01701.18 ORF110510 - 0.0019 18.7 0.1 0.0036 17.8 0.1 1.5 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ Nuc_recep-AF1 PF11825.8 ORF110510 - 0.16 12.0 0.0 0.24 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 FAM209 PF15206.6 ORF109638 - 0.23 11.3 1.6 0.27 11.0 0.2 1.7 2 0 0 2 2 2 0 FAM209 family Laterosporulin PF17861.1 ORF109340 - 0.0072 16.7 0.0 0.014 15.8 0.0 1.5 1 0 0 1 1 1 1 Laterosporulin defensin-like peptide Circo_capsid PF02443.15 ORF109340 - 3.7 7.1 12.2 4.5 6.8 12.2 1.2 1 0 0 1 1 1 0 Circovirus capsid protein JAB PF01398.21 ORF1093 - 7.2e-07 29.2 0.1 1e-06 28.7 0.1 1.2 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 ORF1093 - 3.3e-06 26.9 0.0 4e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain UPF0172 PF03665.13 ORF1093 - 0.041 13.9 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) TPR_1 PF00515.28 ORF108556 - 1.9e-05 24.3 0.5 1.9e-05 24.3 0.5 3.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF108556 - 0.00013 22.2 0.5 0.0056 17.0 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF108556 - 0.001 19.1 0.5 0.001 19.1 0.5 3.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF108556 - 0.0011 18.9 0.3 0.0011 18.9 0.3 2.7 4 0 0 4 4 4 1 Tetratricopeptide repeat MIT PF04212.18 ORF108556 - 0.028 14.5 1.7 0.22 11.6 0.1 2.8 2 1 0 2 2 2 0 MIT (microtubule interacting and transport) domain EIF_2_alpha PF07541.12 ORF108556 - 0.044 13.9 0.8 0.059 13.5 0.8 1.3 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit TPR_10 PF13374.6 ORF108556 - 0.072 13.0 0.3 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF433 PF04255.14 ORF108556 - 0.077 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF433) SapB_1 PF05184.15 ORF108556 - 0.22 11.6 0.2 0.22 11.6 0.2 1.8 2 0 0 2 2 2 0 Saposin-like type B, region 1 DcuC PF03606.15 ORF107806 - 0.00019 20.0 0.0 0.00021 19.9 0.0 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier EpsG PF14897.6 ORF107806 - 0.027 13.8 6.6 0.056 12.7 6.6 1.5 1 1 0 1 1 1 0 EpsG family 7tm_1 PF00001.21 ORF107806 - 0.11 11.8 0.0 0.16 11.3 0.0 1.4 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) NUP PF06516.11 ORF107274 - 1.4e-18 67.2 0.0 1.8e-18 66.8 0.0 1.1 1 0 0 1 1 1 1 Purine nucleoside permease (NUP) DUF4349 PF14257.6 ORF107025 - 0.012 15.0 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) T_Ag_DNA_bind PF02217.16 ORF106657 - 0.062 13.9 0.0 0.097 13.3 0.0 1.3 1 0 0 1 1 1 0 Origin of replication binding protein DASH_Ask1 PF08655.10 ORF105789 - 0.11 12.5 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 DASH complex subunit Ask1 S_4TM PF18159.1 ORF103436 - 0.12 11.7 2.3 0.16 11.3 2.3 1.2 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain CBP_BcsG PF11658.8 ORF103436 - 0.22 9.9 4.9 0.26 9.6 4.9 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG Trp_oprn_chp PF09534.10 ORF103436 - 0.35 10.6 12.9 0.45 10.3 12.9 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF3487 PF11990.8 ORF103436 - 0.56 10.1 9.0 0.8 9.6 9.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) Methyltransf_22 PF13383.6 ORF103135 - 0.0089 15.6 4.1 0.21 11.1 0.4 2.0 1 1 1 2 2 2 2 Methyltransferase domain RIB43A PF05914.12 ORF102613 - 3.6e-14 52.3 10.8 4.5e-14 52.0 10.8 1.0 1 0 0 1 1 1 1 RIB43A NolX PF05819.11 ORF102613 - 0.01 15.2 4.1 0.012 15.0 4.1 1.2 1 0 0 1 1 1 1 NolX protein TPR_1 PF00515.28 ORF10178 - 1.9e-05 24.3 0.5 1.9e-05 24.3 0.5 3.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF10178 - 0.00013 22.2 0.5 0.0056 17.0 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF10178 - 0.001 19.1 0.5 0.001 19.1 0.5 3.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF10178 - 0.0011 18.9 0.3 0.0011 18.9 0.3 2.7 4 0 0 4 4 4 1 Tetratricopeptide repeat MIT PF04212.18 ORF10178 - 0.028 14.5 1.7 0.22 11.6 0.1 2.8 2 1 0 2 2 2 0 MIT (microtubule interacting and transport) domain EIF_2_alpha PF07541.12 ORF10178 - 0.044 13.9 0.8 0.059 13.5 0.8 1.3 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit TPR_10 PF13374.6 ORF10178 - 0.072 13.0 0.3 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF433 PF04255.14 ORF10178 - 0.077 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF433) SapB_1 PF05184.15 ORF10178 - 0.22 11.6 0.2 0.22 11.6 0.2 1.8 2 0 0 2 2 2 0 Saposin-like type B, region 1 BNIP3 PF06553.12 ORF101226 - 0.09 12.4 2.3 0.11 12.1 2.3 1.1 1 0 0 1 1 1 0 BNIP3 DUF4215 PF13948.6 NODE_45969_length_424_cov_1.768638_g38169_i0reverse_frame_1 - 3.2e-22 78.7 78.8 6.9e-07 29.6 13.9 4.4 2 1 3 5 5 5 4 Domain of unknown function (DUF4215) Toxin_21 PF08091.11 NODE_45969_length_424_cov_1.768638_g38169_i0reverse_frame_1 - 0.0097 15.8 20.6 6.8 6.7 0.2 5.7 5 0 0 5 5 5 4 Spider insecticidal peptide zf-FCS PF06467.14 NODE_45969_length_424_cov_1.768638_g38169_i0reverse_frame_1 - 0.14 12.2 26.2 4.9 7.2 0.2 5.4 5 0 0 5 5 5 0 MYM-type Zinc finger with FCS sequence motif zf-A20 PF01754.16 NODE_45948_length_424_cov_5.056555_g38149_i0forward_frame_1 - 2.5 8.1 6.7 1.9 8.5 0.2 2.5 2 0 0 2 2 2 0 A20-like zinc finger Crisp PF08562.10 NODE_45941_length_424_cov_60.789203_g38142_i0reverse_frame_1 - 0.75 10.4 6.4 0.8 10.3 3.6 2.1 2 0 0 2 2 2 0 Crisp Stomagen PF16851.5 NODE_45939_length_424_cov_75.025707_g38140_i0forward_frame_1 - 0.077 13.0 0.4 0.22 11.6 0.4 1.7 2 0 0 2 2 2 0 Stomagen Hepatitis_core PF00906.20 NODE_45930_length_424_cov_124.467866_g38131_i0forward_frame_1 - 0.32 10.5 6.4 0.42 10.1 6.4 1.1 1 0 0 1 1 1 0 Hepatitis core antigen SVA PF05326.11 NODE_45896_length_425_cov_2.617949_g38100_i0reverse_frame_1 - 0.068 13.2 0.7 0.068 13.2 0.7 1.7 2 0 0 2 2 2 0 Seminal vesicle autoantigen (SVA) Polysacc_synt_3 PF13440.6 NODE_45885_length_425_cov_3.517949_g38089_i0reverse_frame_1 - 0.012 14.9 0.6 0.016 14.5 0.6 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF1449 PF07290.11 NODE_45885_length_425_cov_3.517949_g38089_i0forward_frame_1 - 0.0012 18.5 0.1 0.0016 18.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1449) PAG PF15347.6 NODE_45881_length_425_cov_5.035897_g38085_i0reverse_frame_1 - 0.46 9.4 3.7 0.7 8.8 0.0 2.0 2 0 0 2 2 2 0 Phosphoprotein associated with glycosphingolipid-enriched DPM3 PF08285.11 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_1 - 0.05 13.8 0.8 0.099 12.9 0.2 1.8 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) STAG PF08514.11 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_1 - 0.22 11.4 6.1 0.39 10.6 5.8 1.6 1 1 1 2 2 2 0 STAG domain PilJ PF13675.6 NODE_45851_length_425_cov_153.358974_g38055_i0reverse_frame_1 - 0.13 12.2 4.2 1.5 8.9 0.3 2.8 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term DUF5408 PF17402.2 NODE_45846_length_425_cov_215.561538_g38051_i0reverse_frame_1 - 3.3 7.7 9.7 10 6.1 0.2 3.2 3 0 0 3 3 3 0 Family of unknown function (DUF5408) RCC1_2 PF13540.6 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_1 - 1.6e-06 27.7 7.4 0.074 12.9 0.2 4.3 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat Peptidase_C36 PF05415.11 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_1 - 0.038 14.2 0.0 0.17 12.1 0.0 2.0 1 1 1 2 2 2 0 Beet necrotic yellow vein furovirus-type papain-like endopeptidase Spectrin PF00435.21 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_1 - 0.046 14.2 0.0 69 4.0 0.0 2.9 3 0 0 3 3 3 0 Spectrin repeat DUF4984 PF16372.5 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_1 - 0.06 13.3 0.2 39 4.1 0.0 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4984) Glyco_hydro_38N PF01074.22 NODE_45838_length_425_cov_914.235897_g38043_i0forward_frame_1 - 5.1e-14 52.3 0.2 6.5e-14 52.0 0.2 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 NODE_45838_length_425_cov_914.235897_g38043_i0forward_frame_1 - 1.7e-09 37.7 0.0 3.2e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 Alpha mannosidase middle domain SLR1-BP PF07333.12 NODE_45818_length_426_cov_14.616368_g38024_i0reverse_frame_1 - 2.2 8.8 6.4 0.35 11.4 2.0 1.8 2 0 0 2 2 2 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Cdd1 PF11731.8 NODE_45818_length_426_cov_14.616368_g38024_i0forward_frame_1 - 0.17 12.1 0.2 0.33 11.2 0.1 1.5 2 0 0 2 2 2 0 Pathogenicity locus Cytomega_UL84 PF06284.11 NODE_45816_length_426_cov_26.173913_g38022_i0forward_frame_1 - 0.037 12.5 0.1 0.046 12.2 0.1 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein TILa PF12714.7 NODE_45815_length_426_cov_27.616368_g38021_i0forward_frame_1 - 3.1 7.8 13.7 1.2 9.2 2.9 3.1 2 1 1 3 3 3 0 TILa domain DUF5570 PF17731.1 NODE_45813_length_426_cov_36.263427_g38019_i0forward_frame_1 - 0.0083 16.2 0.0 0.023 14.8 0.0 1.7 2 0 0 2 2 2 1 Family of unknown function (DUF5570) zf-Tim10_DDP PF02953.15 NODE_45773_length_426_cov_264.051151_g37980_i0forward_frame_1 - 0.0012 18.4 5.9 0.0012 18.4 5.9 2.1 1 1 1 2 2 2 1 Tim10/DDP family zinc finger Novirhabdo_Nv PF05554.11 NODE_45771_length_426_cov_316.424552_g37978_i0reverse_frame_1 - 0.088 12.6 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 Viral hemorrhagic septicemia virus non-virion protein Imm5 PF14423.6 NODE_45766_length_426_cov_1374.038363_g37973_i0forward_frame_1 - 0.16 12.1 0.9 0.21 11.8 0.9 1.1 1 0 0 1 1 1 0 Immunity protein Imm5 SVWC PF15430.6 NODE_45759_length_427_cov_1.688776_g37966_i1forward_frame_2 - 0.016 15.4 0.7 0.032 14.5 0.4 1.6 2 0 0 2 2 2 0 Single domain von Willebrand factor type C SVWC PF15430.6 NODE_45756_length_427_cov_1.790816_g37966_i0forward_frame_2 - 0.011 16.0 0.2 0.025 14.8 0.1 1.6 2 0 0 2 2 2 0 Single domain von Willebrand factor type C DUF3920 PF13058.6 NODE_45751_length_427_cov_2.737245_g37961_i0forward_frame_3 - 0.077 13.2 0.9 0.14 12.4 0.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3920) MatE PF01554.18 NODE_45751_length_427_cov_2.737245_g37961_i0forward_frame_2 - 5.4e-22 78.2 2.5 6.3e-22 78.0 2.5 1.1 1 0 0 1 1 1 1 MatE DUF1391 PF07151.12 NODE_45751_length_427_cov_2.737245_g37961_i0forward_frame_2 - 0.17 11.7 0.0 0.34 10.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1391) TadE PF07811.12 NODE_45747_length_427_cov_3.158163_g37957_i0forward_frame_2 - 0.59 10.4 3.2 2.9 8.2 3.2 2.1 1 1 0 1 1 1 0 TadE-like protein zf-RING_6 PF14835.6 NODE_45745_length_427_cov_3.744898_g37955_i0forward_frame_3 - 0.083 12.8 2.9 0.4 10.6 0.2 2.3 2 0 0 2 2 2 0 zf-RING of BARD1-type protein Mito_morph_reg PF14972.6 NODE_45741_length_427_cov_4.456633_g37951_i0reverse_frame_2 - 0.0084 15.7 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial morphogenesis regulator Mso1_C PF14477.6 NODE_45738_length_427_cov_5.206633_g37948_i0forward_frame_2 - 0.092 13.2 0.1 0.092 13.2 0.1 2.3 2 1 0 2 2 2 0 Membrane-polarising domain of Mso1 LRR_4 PF12799.7 NODE_45736_length_427_cov_15.007653_g37946_i0reverse_frame_3 - 1.4e-10 41.3 9.2 0.0093 16.4 0.2 4.0 2 1 3 5 5 5 5 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_45736_length_427_cov_15.007653_g37946_i0reverse_frame_3 - 0.0065 16.2 15.8 0.026 14.3 2.8 3.9 2 1 2 4 4 4 3 Leucine rich repeat PhyH PF05721.13 NODE_45731_length_427_cov_56.869898_g37941_i0reverse_frame_3 - 0.095 12.9 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) DUF1415 PF07209.12 NODE_45729_length_427_cov_63.479592_g37939_i0reverse_frame_2 - 0.0015 18.3 0.0 0.0022 17.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1415) DUF5582 PF17819.1 NODE_45726_length_427_cov_78.994898_g37936_i0reverse_frame_2 - 2.8e-05 24.6 0.0 4.1e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5582) Dpy-30 PF05186.13 NODE_45726_length_427_cov_78.994898_g37936_i0reverse_frame_2 - 0.0019 17.8 0.0 0.0038 16.9 0.0 1.5 1 0 0 1 1 1 1 Dpy-30 motif UPF0515 PF15135.6 NODE_45726_length_427_cov_78.994898_g37936_i0forward_frame_3 - 8.2 5.7 8.6 11 5.3 8.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 7tm_3 PF00003.22 NODE_45714_length_427_cov_128.780612_g37925_i0reverse_frame_3 - 0.025 14.3 1.1 0.034 13.9 1.1 1.1 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR DHHC PF01529.20 NODE_45714_length_427_cov_128.780612_g37925_i0reverse_frame_3 - 0.56 10.3 3.6 0.88 9.7 3.5 1.4 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF3139 PF11337.8 NODE_45714_length_427_cov_128.780612_g37925_i0reverse_frame_3 - 4.5 8.0 10.3 1.2 9.8 6.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) ENT PF03735.14 NODE_45709_length_427_cov_174.987245_g37599_i1forward_frame_3 - 0.045 13.8 0.5 0.083 13.0 0.5 1.4 1 0 0 1 1 1 0 ENT domain Rpr2 PF04032.16 NODE_45707_length_427_cov_290.002551_g37919_i0forward_frame_2 - 0.028 14.7 0.1 0.056 13.7 0.1 1.5 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Spaetzle PF16077.5 NODE_45695_length_428_cov_1.676845_g37911_i0forward_frame_2 - 0.074 13.6 0.9 2 9.0 0.1 2.2 2 0 0 2 2 2 0 Spaetzle Myelin_PLP PF01275.19 NODE_45691_length_428_cov_2.066158_g37907_i0reverse_frame_3 - 0.05 13.5 0.2 0.061 13.2 0.2 1.2 1 0 0 1 1 1 0 Myelin proteolipid protein (PLP or lipophilin) RsgA_GTPase PF03193.16 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 8.4e-07 29.0 0.8 0.0059 16.5 0.0 2.0 1 1 1 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.00027 20.5 1.4 0.12 11.9 0.1 2.4 2 1 0 2 2 2 2 Ferrous iron transport protein B MMR_HSR1 PF01926.23 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.0032 17.5 4.0 0.0041 17.2 0.5 2.5 3 1 0 3 3 3 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.005 16.4 0.4 0.023 14.3 0.0 1.9 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain MyTH4 PF00784.17 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.071 13.6 0.1 0.13 12.8 0.1 1.4 1 0 0 1 1 1 0 MyTH4 domain MeaB PF03308.16 NODE_45691_length_428_cov_2.066158_g37907_i0forward_frame_3 - 0.12 11.4 0.3 0.62 9.0 0.1 1.9 1 1 1 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TM231 PF10149.9 NODE_45690_length_428_cov_2.195929_g37906_i0reverse_frame_3 - 1.4e-16 60.7 0.0 1.8e-16 60.4 0.0 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 Lipase_3 PF01764.25 NODE_45689_length_428_cov_2.198473_g37905_i0reverse_frame_2 - 4e-12 46.2 0.0 5.1e-12 45.9 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) DUF676 PF05057.14 NODE_45689_length_428_cov_2.198473_g37905_i0reverse_frame_2 - 0.03 13.8 0.0 0.04 13.4 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_45689_length_428_cov_2.198473_g37905_i0reverse_frame_2 - 0.14 11.9 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein Rad21_Rec8_N PF04825.13 NODE_45687_length_428_cov_2.211196_g37903_i0forward_frame_3 - 0.00034 20.8 0.4 0.00048 20.3 0.3 1.4 1 1 0 1 1 1 1 N terminus of Rad21 / Rec8 like protein PRESAN PF09687.10 NODE_45687_length_428_cov_2.211196_g37903_i0forward_frame_3 - 0.013 16.1 2.1 0.023 15.2 0.3 2.1 1 1 2 3 3 3 0 Plasmodium RESA N-terminal PRTP PF01366.18 NODE_45685_length_428_cov_2.361323_g37901_i0forward_frame_2 - 0.068 11.2 0.2 0.068 11.2 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus processing and transport protein Presenilin PF01080.17 NODE_45672_length_428_cov_47.050891_g37888_i0reverse_frame_3 - 3.9 6.1 5.8 3.6 6.2 5.8 1.2 1 0 0 1 1 1 0 Presenilin DUF2973 PF11189.8 NODE_45670_length_428_cov_54.216285_g37886_i0reverse_frame_3 - 0.031 14.4 0.3 0.04 14.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) Zfx_Zfy_act PF04704.13 NODE_45670_length_428_cov_54.216285_g37886_i0forward_frame_2 - 0.28 10.2 4.1 0.32 10.1 4.1 1.1 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region YafO_toxin PF13957.6 NODE_45668_length_428_cov_59.837150_g37884_i0forward_frame_2 - 0.061 13.4 0.0 0.087 12.9 0.0 1.4 1 0 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system ArAE_1_C PF11728.8 NODE_45662_length_428_cov_75.282443_g37878_i0reverse_frame_3 - 0.0033 17.4 1.2 0.0051 16.8 1.2 1.3 1 0 0 1 1 1 1 Putative aromatic acid exporter C-terminal domain Pkinase PF00069.25 NODE_45658_length_428_cov_88.666667_g37874_i0reverse_frame_3 - 7.2e-22 78.0 0.0 9.4e-22 77.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_45658_length_428_cov_88.666667_g37874_i0reverse_frame_3 - 0.00034 20.0 0.0 0.00043 19.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2714 PF10896.8 NODE_45657_length_428_cov_90.353690_g37873_i0forward_frame_2 - 0.014 15.4 0.3 0.018 15.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2714) Death_2 PF14786.6 NODE_45657_length_428_cov_90.353690_g37873_i0forward_frame_2 - 0.06 13.3 0.1 0.11 12.4 0.0 1.5 1 1 1 2 2 2 0 Tube Death domain PhoD PF09423.10 NODE_45656_length_428_cov_92.284987_g37872_i0forward_frame_2 - 0.038 13.0 0.1 0.054 12.5 0.1 1.3 1 0 0 1 1 1 0 PhoD-like phosphatase RCC1 PF00415.18 NODE_45655_length_428_cov_94.595420_g37871_i0forward_frame_3 - 5.9e-10 39.6 2.8 7.8e-06 26.4 0.0 3.5 3 1 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_45655_length_428_cov_94.595420_g37871_i0forward_frame_3 - 1.4e-06 27.9 2.5 0.00043 20.0 0.1 2.5 2 1 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat MGTL PF17059.5 NODE_45652_length_428_cov_100.870229_g37868_i0reverse_frame_3 - 4.7 7.2 7.2 12 5.9 0.6 2.7 2 0 0 2 2 2 0 MgtA leader peptide UPF0016 PF01169.19 NODE_45651_length_428_cov_102.603053_g37867_i0forward_frame_3 - 0.0013 19.0 5.7 0.0013 19.0 5.7 1.5 2 0 0 2 2 2 1 Uncharacterized protein family UPF0016 GWT1 PF06423.12 NODE_45651_length_428_cov_102.603053_g37867_i0forward_frame_3 - 0.12 12.5 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 GWT1 Joubert PF15392.6 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_3 - 0.016 15.0 5.9 0.019 14.7 5.9 1.0 1 0 0 1 1 1 0 Joubert syndrome-associated Ribosomal_S27 PF01599.19 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_2 - 2.7e-26 91.4 3.1 2.7e-26 91.4 3.1 2.0 2 0 0 2 2 2 1 Ribosomal protein S27a ubiquitin PF00240.23 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_2 - 5.6e-08 32.4 0.0 1.9e-07 30.7 0.0 1.8 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_45646_length_428_cov_134.544529_g37862_i0forward_frame_2 - 0.047 13.5 0.0 0.2 11.5 0.0 2.0 2 1 1 3 3 3 0 Ubiquitin-2 like Rad60 SUMO-like 2OG-FeII_Oxy_3 PF13640.6 NODE_45641_length_428_cov_201.623410_g37857_i0forward_frame_3 - 0.0004 21.2 0.0 0.00061 20.6 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 NODE_45641_length_428_cov_201.623410_g37857_i0forward_frame_3 - 0.0029 18.2 0.0 0.0048 17.5 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily TMEM101 PF15111.6 NODE_45639_length_428_cov_234.837150_g37855_i0reverse_frame_2 - 0.016 14.7 0.5 0.031 13.9 0.2 1.5 1 1 1 2 2 2 0 TMEM101 protein family DUF167 PF02594.16 NODE_45634_length_428_cov_816.618321_g37850_i0reverse_frame_2 - 2e-09 37.4 0.2 3.2e-09 36.8 0.2 1.3 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Hexapep_2 PF14602.6 NODE_45634_length_428_cov_816.618321_g37850_i0reverse_frame_2 - 0.031 14.0 0.0 0.045 13.5 0.0 1.2 1 0 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase Arc_trans_TRASH PF08394.10 NODE_45634_length_428_cov_816.618321_g37850_i0forward_frame_2 - 0.36 11.2 5.3 2.2 8.7 0.8 2.6 2 0 0 2 2 2 0 Archaeal TRASH domain LysM PF01476.20 NODE_45631_length_428_cov_2378.473282_g37847_i0forward_frame_3 - 0.11 12.6 0.0 0.44 10.7 0.0 1.9 2 0 0 2 2 2 0 LysM domain DUF2671 PF10877.8 NODE_45627_length_428_cov_2782.000000_g36700_i2forward_frame_3 - 0.02 14.6 0.7 0.047 13.5 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) ABC_export PF16962.5 NODE_45627_length_428_cov_2782.000000_g36700_i2forward_frame_2 - 0.0075 14.8 2.3 0.0093 14.5 2.3 1.1 1 0 0 1 1 1 1 Putative ABC exporter SelP_N PF04592.14 NODE_45624_length_428_cov_34713.552163_g37842_i0reverse_frame_3 - 0.078 12.4 1.0 0.1 12.0 1.0 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region TSP_NTD PF17804.1 NODE_45623_length_429_cov_1.685279_g37841_i0forward_frame_3 - 0.072 13.4 0.2 0.3 11.3 0.0 1.9 2 0 0 2 2 2 0 Tail specific protease N-terminal domain Mei5_like PF17021.5 NODE_45623_length_429_cov_1.685279_g37841_i0forward_frame_3 - 0.095 12.7 1.4 5.8 7.0 0.1 2.3 2 0 0 2 2 2 0 Putative double-strand recombination repair-like TBCA PF02970.16 NODE_45623_length_429_cov_1.685279_g37841_i0forward_frame_3 - 0.1 13.0 1.2 0.5 10.7 0.2 2.0 2 0 0 2 2 2 0 Tubulin binding cofactor A PSI_integrin PF17205.3 NODE_45618_length_429_cov_1.931472_g37836_i0forward_frame_3 - 1.2 9.0 6.4 3.5 7.4 3.2 2.7 2 1 0 2 2 2 0 Integrin plexin domain HSP70 PF00012.20 NODE_45617_length_429_cov_2.010152_g37835_i0forward_frame_3 - 0.0054 15.0 3.7 0.0054 15.0 3.7 2.0 1 1 1 2 2 2 1 Hsp70 protein Ax_dynein_light PF10211.9 NODE_45617_length_429_cov_2.010152_g37835_i0forward_frame_3 - 0.015 15.2 13.0 0.015 15.2 13.0 2.0 1 1 1 2 2 2 0 Axonemal dynein light chain UPF0242 PF06785.11 NODE_45617_length_429_cov_2.010152_g37835_i0forward_frame_3 - 0.036 14.2 7.9 0.036 14.2 7.9 2.4 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus CEP63 PF17045.5 NODE_45617_length_429_cov_2.010152_g37835_i0forward_frame_3 - 0.12 12.3 25.1 0.12 12.3 14.7 2.7 1 1 1 2 2 2 0 Centrosomal protein of 63 kDa DUF4407 PF14362.6 NODE_45617_length_429_cov_2.010152_g37835_i0forward_frame_3 - 0.27 10.5 11.5 1.3 8.3 11.5 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Fungal_TACC PF12709.7 NODE_45617_length_429_cov_2.010152_g37835_i0forward_frame_3 - 0.68 10.4 22.1 0.91 10.0 2.3 3.6 2 2 1 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins FlaC_arch PF05377.11 NODE_45617_length_429_cov_2.010152_g37835_i0forward_frame_3 - 1.7 9.1 12.5 4.6 7.7 0.5 3.3 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) TPR_MLP1_2 PF07926.12 NODE_45617_length_429_cov_2.010152_g37835_i0forward_frame_3 - 2.5 8.1 21.6 16 5.6 21.6 2.1 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein GrpE PF01025.19 NODE_45617_length_429_cov_2.010152_g37835_i0forward_frame_3 - 4 7.1 21.3 3.3 7.4 8.4 2.2 1 1 1 2 2 2 0 GrpE CH_2 PF06294.11 NODE_45616_length_429_cov_2.010152_g37834_i0reverse_frame_2 - 0.017 15.3 0.2 0.021 14.9 0.2 1.2 1 0 0 1 1 1 0 CH-like domain in sperm protein Ribonucleas_3_2 PF11469.8 NODE_45616_length_429_cov_2.010152_g37834_i0reverse_frame_2 - 0.12 12.8 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 Ribonuclease III DUF705 PF05152.12 NODE_45613_length_429_cov_2.274112_g37831_i0reverse_frame_2 - 0.041 13.4 1.2 0.064 12.7 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF705) DUF2263 PF10021.9 NODE_45598_length_429_cov_4.170051_g37816_i0reverse_frame_3 - 4.5e-05 23.9 0.0 5.8e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2263) Bundlin PF05307.11 NODE_45595_length_429_cov_42.494924_g37813_i0forward_frame_2 - 0.18 11.6 0.1 0.31 10.9 0.1 1.4 1 0 0 1 1 1 0 Bundlin GET2 PF08690.10 NODE_45590_length_429_cov_53.680203_g37808_i0forward_frame_2 - 0.013 15.2 2.4 0.016 14.9 2.4 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 YMF19 PF02326.15 NODE_45581_length_429_cov_80.553299_g37799_i0reverse_frame_3 - 0.077 13.8 1.8 0.12 13.2 1.8 1.4 1 0 0 1 1 1 0 Plant ATP synthase F0 Comm PF15957.5 NODE_45581_length_429_cov_80.553299_g37799_i0reverse_frame_3 - 0.12 12.7 0.2 0.16 12.3 0.2 1.2 1 0 0 1 1 1 0 Commissureless Serpentine_r_xa PF03383.15 NODE_45581_length_429_cov_80.553299_g37799_i0reverse_frame_2 - 0.21 11.6 7.4 0.25 11.3 7.4 1.2 1 0 0 1 1 1 0 Caenorhabditis serpentine receptor-like protein, class xa VATC PF18716.1 NODE_45580_length_429_cov_81.058376_g37798_i0reverse_frame_3 - 1.3e-08 34.5 1.4 2.1e-08 33.9 1.4 1.3 1 0 0 1 1 1 1 Vms1-associating treble clef domain zf-FCS PF06467.14 NODE_45580_length_429_cov_81.058376_g37798_i0reverse_frame_3 - 0.24 11.4 3.5 0.59 10.1 3.5 1.7 1 1 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif vMSA PF00695.19 NODE_45577_length_429_cov_87.837563_g37795_i0forward_frame_3 - 0.021 13.9 0.6 0.039 13.1 0.6 1.4 1 1 0 1 1 1 0 Major surface antigen from hepadnavirus RCC1_2 PF13540.6 NODE_45575_length_429_cov_109.370558_g37793_i0reverse_frame_2 - 0.001 18.8 2.8 0.06 13.2 0.2 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF5414 PF17435.2 NODE_45572_length_429_cov_153.908629_g37790_i0reverse_frame_3 - 0.0062 16.2 0.4 0.0074 16.0 0.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5414) Cation_ATPase_C PF00689.21 NODE_45572_length_429_cov_153.908629_g37790_i0forward_frame_3 - 0.38 10.4 7.9 0.57 9.9 7.9 1.4 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF2505 PF10698.9 NODE_45571_length_429_cov_166.629442_g37789_i0reverse_frame_2 - 0.022 14.9 0.1 0.026 14.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2505) Rrn6 PF10214.9 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_3 - 0.17 10.4 4.9 0.18 10.3 4.9 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor KSHV_K8 PF07188.11 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_3 - 0.31 10.4 4.7 0.37 10.1 4.7 1.1 1 0 0 1 1 1 0 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein DUF4672 PF15716.5 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_3 - 0.47 10.1 6.6 0.57 9.8 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) Pap_E4 PF02711.14 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_3 - 1.1 10.2 8.0 1.8 9.6 8.0 1.4 1 0 0 1 1 1 0 E4 protein TT_ORF1 PF02956.14 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_3 - 3.5 6.2 19.5 4.5 5.8 19.5 1.1 1 0 0 1 1 1 0 TT viral orf 1 HemY_N PF07219.13 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_3 - 9 6.6 6.5 4.7 7.4 2.0 2.2 2 0 0 2 2 2 0 HemY protein N-terminus Eapp_C PF10238.9 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.084 13.0 4.0 0.09 12.9 4.0 1.2 1 0 0 1 1 1 0 E2F-associated phosphoprotein CobT PF06213.12 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.084 12.3 4.3 0.11 11.9 4.3 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT PI3K_1B_p101 PF10486.9 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.088 10.6 4.1 0.084 10.6 4.1 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit Polyoma_coat2 PF00761.20 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.1 12.3 0.6 0.13 11.9 0.6 1.1 1 0 0 1 1 1 0 Polyomavirus coat protein CDC45 PF02724.14 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.13 10.5 5.9 0.12 10.7 5.9 1.0 1 0 0 1 1 1 0 CDC45-like protein Sec62 PF03839.16 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.16 11.5 1.6 0.16 11.5 1.6 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 NPR3 PF03666.13 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.44 9.3 7.4 0.42 9.4 7.4 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.5 9.1 4.6 0.5 9.1 4.6 1.1 1 0 0 1 1 1 0 Presenilin Ferlin_C PF16165.5 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.77 9.7 4.9 0.96 9.4 4.9 1.3 1 0 0 1 1 1 0 Ferlin C-terminus Cytomega_UL84 PF06284.11 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.81 8.1 4.8 0.99 7.8 4.8 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein RR_TM4-6 PF06459.12 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 0.9 9.3 6.8 1.2 8.9 6.8 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 NARP1 PF12569.8 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 1.2 7.9 11.3 1.5 7.6 11.3 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Coilin_N PF15862.5 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 1.6 8.5 15.1 2.5 7.9 15.1 1.3 1 0 0 1 1 1 0 Coilin N-terminus Connexin PF00029.19 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 2 8.1 6.9 2.5 7.8 6.9 1.2 1 0 0 1 1 1 0 Connexin Med19 PF10278.9 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 2.1 8.2 17.5 2.9 7.8 17.5 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 RNA_polI_A34 PF08208.11 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 2.3 8.3 20.4 3.2 7.8 20.4 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF3464 PF11947.8 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 2.3 7.9 6.8 3.6 7.3 6.8 1.3 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 CCDC106 PF15794.5 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 2.8 7.6 20.2 0.36 10.5 16.1 1.5 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 106 Peptidase_S49_N PF08496.10 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 3.6 7.6 10.9 4.9 7.2 10.9 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal AP3D1 PF06375.11 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 3.8 7.7 17.7 6.6 7.0 17.7 1.4 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Jak1_Phl PF17887.1 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 3.8 7.5 9.9 7.3 6.6 9.9 1.4 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain DUF4614 PF15391.6 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 5 7.1 9.8 0.69 9.9 6.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4614) MAP17 PF15807.5 NODE_45569_length_429_cov_178.527919_g37787_i0reverse_frame_2 - 6.5 7.0 8.2 11 6.3 8.2 1.3 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Prominin PF05478.11 NODE_45569_length_429_cov_178.527919_g37787_i0forward_frame_3 - 0.0039 15.2 2.7 0.0048 14.9 2.7 1.0 1 0 0 1 1 1 1 Prominin DUF3611 PF12263.8 NODE_45569_length_429_cov_178.527919_g37787_i0forward_frame_3 - 0.017 15.1 2.1 0.022 14.6 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) Phage_holin_3_6 PF07332.11 NODE_45569_length_429_cov_178.527919_g37787_i0forward_frame_3 - 0.044 13.8 5.2 0.065 13.3 5.2 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4131 PF13567.6 NODE_45569_length_429_cov_178.527919_g37787_i0forward_frame_3 - 5.4 6.6 8.7 9.7 5.8 8.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Vpu PF00558.19 NODE_45568_length_429_cov_216.266497_g37786_i0reverse_frame_2 - 0.19 11.5 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 Vpu protein ABC_export PF16962.5 NODE_45560_length_429_cov_2774.949239_g36700_i1forward_frame_3 - 0.0075 14.8 2.3 0.0093 14.5 2.3 1.1 1 0 0 1 1 1 1 Putative ABC exporter BofA PF07441.11 NODE_45560_length_429_cov_2774.949239_g36700_i1forward_frame_2 - 3.1 8.1 12.2 0.5 10.6 2.4 2.2 2 0 0 2 2 2 0 SigmaK-factor processing regulatory protein BofA DUF1993 PF09351.10 ORF99985 - 0.024 14.8 0.0 0.033 14.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) Neurensin PF14927.6 ORF974 - 0.1 12.3 0.1 1.8 8.3 0.0 2.1 2 0 0 2 2 2 0 Neurensin Semenogelin PF05474.11 ORF974 - 0.12 10.9 0.0 0.15 10.6 0.0 1.0 1 0 0 1 1 1 0 Semenogelin LapA_dom PF06305.11 ORF9567 - 0.0038 17.0 0.2 0.0058 16.4 0.2 1.2 1 0 0 1 1 1 1 Lipopolysaccharide assembly protein A domain Saf_2TM PF18303.1 ORF9567 - 0.038 13.6 0.1 0.053 13.1 0.1 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain TMEM154 PF15102.6 ORF9567 - 0.093 12.6 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF4381 PF14316.6 ORF9567 - 0.26 11.5 0.2 0.42 10.8 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4381) Presenilin PF01080.17 ORF93730 - 0.29 9.9 2.9 0.35 9.6 2.9 1.1 1 0 0 1 1 1 0 Presenilin RRN3 PF05327.11 ORF93730 - 2.3 6.6 4.7 2.4 6.6 4.7 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 ExbD PF02472.16 ORF92401 - 2.2e-23 82.9 0.2 2.4e-23 82.7 0.2 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR KxDL PF10241.9 ORF92135 - 0.04 14.2 0.6 0.12 12.7 0.3 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein SPATA19 PF15212.6 ORF92024 - 0.02 15.1 1.0 0.035 14.3 0.2 1.8 1 1 1 2 2 2 0 Spermatogenesis-associated protein 19, mitochondrial DUF5496 PF17600.2 ORF92024 - 0.064 13.3 0.1 0.1 12.6 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5496) DUF3496 PF12001.8 ORF92024 - 0.088 13.2 8.8 0.14 12.5 8.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) Cdh1_DBD_1 PF18196.1 ORF92024 - 0.14 12.5 7.1 0.14 12.5 6.1 1.5 1 1 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 DRY_EERY PF09750.9 ORF89330 - 0.047 13.9 2.0 0.054 13.8 2.0 1.2 1 0 0 1 1 1 0 Alternative splicing regulator GFA PF04828.14 ORF87085 - 1e-06 29.0 1.9 1e-06 29.0 1.9 1.6 2 0 0 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme PHP PF02811.19 ORF87085 - 0.068 13.5 0.1 0.079 13.2 0.1 1.1 1 0 0 1 1 1 0 PHP domain Sdh5 PF03937.16 ORF8677 - 9.4e-25 86.4 0.4 1.3e-24 85.9 0.4 1.2 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase YbjN PF10722.9 ORF8677 - 0.011 15.8 0.0 0.015 15.3 0.0 1.3 1 0 0 1 1 1 0 Putative bacterial sensory transduction regulator RE_XamI PF09572.10 ORF8677 - 0.11 12.2 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 XamI restriction endonuclease Pap_E4 PF02711.14 ORF85691 - 0.39 11.7 13.4 0.66 11.0 13.4 1.4 1 0 0 1 1 1 0 E4 protein DUF1685 PF07939.11 ORF85573 - 0.011 15.4 0.0 0.091 12.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1685) DEAD_2 PF06733.15 ORF85424 - 0.0076 15.9 0.1 0.0084 15.7 0.1 1.2 1 0 0 1 1 1 1 DEAD_2 RasGEF PF00617.19 ORF83503 - 0.14 12.4 1.0 1 9.5 0.2 1.9 1 1 1 2 2 2 0 RasGEF domain LRR_4 PF12799.7 ORF82862 - 0.044 14.2 1.1 0.61 10.6 0.1 2.5 2 0 0 2 2 2 0 Leucine Rich repeats (2 copies) zf-His_Me_endon PF05551.11 ORF82814 - 0.014 15.6 0.2 0.019 15.1 0.2 1.2 1 0 0 1 1 1 0 Zinc-binding loop region of homing endonuclease Ribosomal_L11_N PF03946.14 ORF79975 - 3.1e-32 110.2 0.4 5.7e-32 109.4 0.4 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 ORF79975 - 7.8e-26 90.4 2.3 1.2e-25 89.8 2.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain DUF3140 PF11338.8 ORF79975 - 0.04 14.3 0.2 0.13 12.7 0.1 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3140) AAA_lid_3 PF17862.1 ORF79975 - 0.099 12.5 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA+ lid domain TamB PF04357.13 ORF79629 - 0.0069 15.7 1.7 0.0078 15.5 1.7 1.1 1 0 0 1 1 1 1 TamB, inner membrane protein subunit of TAM complex Flexi_CP_N PF08358.10 ORF79629 - 0.058 13.4 0.1 0.17 11.9 0.1 1.8 1 0 0 1 1 1 0 Carlavirus coat Phasin PF05597.11 ORF79629 - 0.084 12.9 0.4 0.15 12.1 0.3 1.5 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF4145 PF13643.6 ORF78851 - 1.9 8.7 5.5 0.4 10.8 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4145) CREPT PF16566.5 ORF78024 - 0.66 10.2 11.6 0.12 12.6 6.9 1.9 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour RTT107_BRCT_5 PF16770.5 ORF76878 - 0.059 13.3 0.1 0.15 12.0 0.1 1.8 1 1 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain COesterase PF00135.28 ORF76318 - 0.024 13.5 1.8 0.026 13.4 1.8 1.0 1 0 0 1 1 1 0 Carboxylesterase family Presenilin PF01080.17 ORF76318 - 1.6 7.4 5.2 2.1 7.0 5.2 1.2 1 0 0 1 1 1 0 Presenilin YIF1 PF03878.15 ORF75091 - 0.65 9.5 6.2 0.77 9.2 6.2 1.2 1 0 0 1 1 1 0 YIF1 Thionin PF00321.17 ORF75091 - 5.8 7.5 10.5 21 5.7 10.5 2.0 1 1 0 1 1 1 0 Plant thionin CENP-H PF05837.12 ORF73927 - 0.00017 22.0 5.3 0.0003 21.2 5.3 1.3 1 0 0 1 1 1 1 Centromere protein H (CENP-H) BAR_3 PF16746.5 ORF73927 - 0.00038 20.2 3.9 0.00057 19.7 3.9 1.3 1 0 0 1 1 1 1 BAR domain of APPL family Taxilin PF09728.9 ORF73927 - 0.0019 17.5 6.0 0.0026 17.0 6.0 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein bZIP_1 PF00170.21 ORF73927 - 0.0027 17.8 4.9 0.0027 17.8 4.9 2.7 3 1 1 4 4 3 1 bZIP transcription factor Jnk-SapK_ap_N PF09744.9 ORF73927 - 0.004 17.4 4.5 0.004 17.4 4.5 1.4 2 0 0 2 2 1 1 JNK_SAPK-associated protein-1 ATG16 PF08614.11 ORF73927 - 0.0047 17.2 6.0 0.0058 16.9 6.0 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) LCD1 PF09798.9 ORF73927 - 0.0051 15.4 3.8 0.0059 15.2 3.8 1.1 1 0 0 1 1 1 1 DNA damage checkpoint protein TMF_TATA_bd PF12325.8 ORF73927 - 0.0057 16.9 3.6 0.0057 16.9 3.6 1.5 2 0 0 2 2 1 1 TATA element modulatory factor 1 TATA binding Laminin_II PF06009.12 ORF73927 - 0.0076 16.3 4.0 0.0094 16.0 3.5 1.4 1 1 0 1 1 1 1 Laminin Domain II EMP24_GP25L PF01105.24 ORF73927 - 0.0094 15.9 0.9 0.013 15.4 0.9 1.4 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD MctB PF11382.8 ORF73927 - 0.0098 15.6 0.7 0.012 15.4 0.7 1.1 1 0 0 1 1 1 1 Copper transport outer membrane protein, MctB ERM PF00769.19 ORF73927 - 0.011 15.6 5.6 0.011 15.6 5.6 1.5 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Ax_dynein_light PF10211.9 ORF73927 - 0.011 15.7 12.0 0.015 15.2 12.0 1.4 1 1 0 1 1 1 0 Axonemal dynein light chain FlaC_arch PF05377.11 ORF73927 - 0.012 16.0 2.5 0.012 16.0 2.5 2.2 2 1 0 2 2 1 0 Flagella accessory protein C (FlaC) YabA PF06156.13 ORF73927 - 0.013 16.1 5.0 0.013 16.1 5.0 1.6 2 0 0 2 2 1 0 Initiation control protein YabA Serine_rich PF08824.10 ORF73927 - 0.013 15.5 4.9 0.036 14.1 2.3 2.0 1 1 1 2 2 2 0 Serine rich protein interaction domain RasGAP_C PF03836.15 ORF73927 - 0.014 15.6 4.2 0.024 14.8 4.2 1.4 1 0 0 1 1 1 0 RasGAP C-terminus ADIP PF11559.8 ORF73927 - 0.018 15.1 8.2 0.018 15.1 8.2 1.5 2 0 0 2 2 1 0 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 ORF73927 - 0.032 13.5 3.7 0.043 13.1 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Herpes_UL6 PF01763.16 ORF73927 - 0.064 11.8 3.4 0.079 11.5 3.4 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like KxDL PF10241.9 ORF73927 - 0.074 13.3 0.2 0.074 13.3 0.2 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein K-box PF01486.17 ORF73927 - 0.081 13.1 13.9 0.13 12.5 9.5 2.8 2 1 0 2 2 2 0 K-box region DivIC PF04977.15 ORF73927 - 0.096 12.5 13.3 0.028 14.2 8.6 2.3 2 1 1 3 3 2 0 Septum formation initiator APG6_N PF17675.1 ORF73927 - 0.11 13.1 10.6 0.16 12.5 10.6 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region TMPIT PF07851.13 ORF73927 - 0.12 11.6 3.7 0.15 11.3 3.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein V_ATPase_I PF01496.19 ORF73927 - 0.13 10.1 2.3 0.14 10.0 2.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Phage_GP20 PF06810.11 ORF73927 - 0.18 11.6 12.1 0.031 14.1 8.4 1.5 2 0 0 2 2 2 0 Phage minor structural protein GP20 GrpE PF01025.19 ORF73927 - 0.19 11.4 8.4 0.34 10.5 8.4 1.4 1 0 0 1 1 1 0 GrpE Sec34 PF04136.15 ORF73927 - 0.31 10.9 7.7 0.064 13.1 4.3 1.6 2 0 0 2 2 2 0 Sec34-like family Occludin_ELL PF07303.13 ORF73927 - 0.31 11.8 5.5 0.54 11.0 5.5 1.4 1 0 0 1 1 1 0 Occludin homology domain SlyX PF04102.12 ORF73927 - 0.44 11.2 4.2 0.51 11.0 1.8 2.3 2 1 0 2 2 2 0 SlyX ZapB PF06005.12 ORF73927 - 0.62 10.5 14.0 0.054 13.9 8.7 1.9 2 1 0 2 2 2 0 Cell division protein ZapB TSC22 PF01166.18 ORF73927 - 0.67 10.3 11.1 0.32 11.3 1.4 2.8 1 1 1 2 2 2 0 TSC-22/dip/bun family DUF5082 PF16888.5 ORF73927 - 0.93 9.8 14.3 0.15 12.4 9.6 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) NEMO PF11577.8 ORF73927 - 0.99 9.5 11.2 0.13 12.3 5.0 2.2 2 0 0 2 2 2 0 NF-kappa-B essential modulator NEMO DUF4140 PF13600.6 ORF73927 - 1.3 9.5 5.5 6.3 7.3 5.4 2.2 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DASH_Dam1 PF08653.10 ORF73927 - 1.3 8.9 5.7 4.7 7.1 0.6 2.8 2 1 1 3 3 3 0 DASH complex subunit Dam1 Fzo_mitofusin PF04799.13 ORF73927 - 2.5 7.6 5.6 1.7 8.2 2.4 2.0 1 1 0 2 2 2 0 fzo-like conserved region FlxA PF14282.6 ORF73927 - 2.6 8.1 11.7 0.32 11.0 7.8 1.6 2 1 0 2 2 1 0 FlxA-like protein DUF5320 PF17253.2 ORF73927 - 7.8 7.6 7.9 31 5.7 3.3 2.9 2 1 0 2 2 2 0 Family of unknown function (DUF5320) REV PF00424.18 ORF73600 - 0.35 10.9 3.9 0.14 12.2 0.3 1.9 1 1 1 2 2 2 0 REV protein (anti-repression trans-activator protein) LRR_6 PF13516.6 ORF72947 - 7.8e-10 38.0 4.9 0.052 13.6 0.0 5.1 5 2 0 5 5 5 4 Leucine Rich repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks181.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks181.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks181.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks181.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UPAR_LY6 PF00021.21 ORF72499 - 0.62 10.8 6.5 6.9 7.5 0.2 2.3 2 1 0 2 2 2 0 u-PAR/Ly-6 domain MTBP_C PF14920.6 ORF72484 - 0.36 10.5 4.1 0.38 10.5 4.1 1.2 1 0 0 1 1 1 0 MDM2-binding Rrn6 PF10214.9 ORF7138 - 0.0095 14.5 2.2 0.0089 14.6 2.2 1.0 1 0 0 1 1 1 1 RNA polymerase I-specific transcription-initiation factor DUF1336 PF07059.12 ORF69614 - 2.7e-07 30.9 0.0 3.2e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1336) CD45 PF12567.8 ORF69614 - 0.012 15.6 3.7 0.013 15.5 0.5 2.2 2 0 0 2 2 2 0 Leukocyte receptor CD45 Rab_eff_C PF04698.12 ORF67989 - 0.17 10.1 0.1 0.18 10.0 0.1 1.0 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus Cytochrom_B562 PF07361.11 ORF67942 - 2.8 8.6 12.2 0.22 12.2 5.2 2.0 1 1 1 2 2 2 0 Cytochrome b562 Pup PF05639.11 ORF67942 - 2.9 8.9 13.7 1.8 9.5 5.1 2.4 2 0 0 2 2 2 0 Pup-like protein Uds1 PF15456.6 ORF67942 - 4 7.6 12.5 40 4.4 12.5 2.0 1 1 0 1 1 1 0 Up-regulated During Septation DUF2200 PF09966.9 ORF66414 - 0.061 13.5 0.0 0.085 13.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2200) Pollen_allerg_1 PF01357.21 ORF65839 - 0.11 12.5 0.5 0.17 11.9 0.1 1.5 1 1 0 1 1 1 0 Pollen allergen DUF1685 PF07939.11 ORF65104 - 0.011 15.4 0.0 0.091 12.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1685) DUF2267 PF10025.9 ORF64323 - 0.029 14.7 0.0 0.068 13.5 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2267) NTP_transferase PF00483.23 ORF62903 - 0.024 14.2 0.1 0.03 13.9 0.1 1.1 1 0 0 1 1 1 0 Nucleotidyl transferase Usp PF00582.26 ORF61425 - 2.2e-16 60.6 0.0 2.5e-16 60.5 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Kazal_2 PF07648.15 ORF61425 - 0.013 15.6 0.1 0.021 14.9 0.1 1.3 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain Brix PF04427.18 ORF61425 - 0.055 13.6 0.0 0.069 13.2 0.0 1.1 1 0 0 1 1 1 0 Brix domain GTP-bdg_N PF13167.6 ORF61425 - 0.1 13.3 0.0 0.32 11.7 0.0 1.7 2 0 0 2 2 2 0 GTP-binding GTPase N-terminal DUF4895 PF16236.5 ORF61425 - 0.18 11.5 1.4 2.8 7.6 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4895) Ribosomal_L27e PF01777.18 ORF60655 - 1.3e-23 83.1 8.5 1.9e-23 82.6 8.5 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 ORF60655 - 0.019 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 KOW motif Uricase PF01014.18 ORF60362 - 0.13 12.6 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Uricase ERCC4 PF02732.15 ORF59649 - 0.021 15.0 0.1 0.033 14.4 0.1 1.4 1 1 0 1 1 1 0 ERCC4 domain AIRS_C PF02769.22 ORF59352 - 9.8e-25 87.5 0.4 1.1e-24 87.3 0.4 1.1 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain PX PF00787.24 ORF59200 - 0.0063 16.5 1.3 0.011 15.7 1.3 1.6 1 1 0 1 1 1 1 PX domain Clat_adaptor_s PF01217.20 ORF58506 - 8.7e-56 187.8 4.9 9.5e-56 187.7 4.9 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain DUF2990 PF11693.8 ORF5526 - 0.17 12.1 0.8 0.51 10.5 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2990) FapA PF03961.13 ORF53007 - 5.7 5.4 9.2 7.1 5.1 9.2 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A MORN PF02493.20 ORF51621 - 2e-15 55.6 18.8 2.8e-06 26.9 0.3 4.5 4 0 0 4 4 4 4 MORN repeat IPI_T4 PF11634.8 ORF51621 - 0.11 12.5 0.0 0.97 9.5 0.1 2.1 2 0 0 2 2 2 0 Nuclease inhibitor from bacteriophage T4 Ribosomal_L27e PF01777.18 ORF50233 - 1.3e-23 83.1 8.5 1.9e-23 82.6 8.5 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 ORF50233 - 0.019 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 KOW motif Caskin-Pro-rich PF16907.5 ORF47546 - 0.5 10.9 13.8 1.5 9.4 0.1 3.1 3 0 0 3 3 3 0 Proline rich region of Caskin proteins PQ-loop PF04193.14 ORF45849 - 2.3e-16 59.3 2.4 6.1e-15 54.7 0.1 2.2 2 0 0 2 2 2 2 PQ loop repeat NUSAP PF16006.5 ORF44991 - 0.26 11.0 3.5 0.34 10.6 3.2 1.4 2 0 0 2 2 2 0 Nucleolar and spindle-associated protein Nefa_Nip30_N PF10187.9 ORF43793 - 0.0072 16.7 8.5 0.082 13.3 2.2 2.2 2 0 0 2 2 2 2 N-terminal domain of NEFA-interacting nuclear protein NIP30 MUG113 PF13455.6 ORF43537 - 0.14 12.9 0.8 0.3 11.8 0.8 1.6 1 1 0 1 1 1 0 Meiotically up-regulated gene 113 S1 PF00575.23 ORF4271 - 2.2e-09 37.6 0.7 0.00084 19.6 0.0 3.0 2 1 0 2 2 2 2 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF4271 - 3.5e-08 33.3 1.1 0.00031 20.6 0.3 2.6 2 1 0 2 2 2 2 RNase II-type exonuclease C-terminal S1 domain MoeA_C PF03454.15 ORF4271 - 0.00067 19.8 0.2 0.011 15.9 0.0 2.4 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) TOBE_2 PF08402.10 ORF4271 - 0.0049 17.0 0.4 0.16 12.2 0.1 2.7 2 1 1 3 3 3 1 TOBE domain DUF3016 PF11454.8 ORF4271 - 0.03 14.1 0.0 1.3 8.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3016) Herpes_UL20 PF04544.12 ORF42188 - 0.07 13.5 3.7 0.087 13.2 3.7 1.1 1 0 0 1 1 1 0 Herpesvirus egress protein UL20 NAD_binding_6 PF08030.12 ORF42188 - 0.1 12.7 0.7 0.13 12.3 0.7 1.1 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Stc1 PF12898.7 ORF41704 - 0.19 12.3 7.6 49 4.6 7.6 2.9 1 1 0 1 1 1 0 Stc1 domain DUF1375 PF07119.12 ORF41704 - 0.43 11.0 5.9 2.5 8.6 0.1 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1375) zf-nanos PF05741.13 ORF41704 - 3.5 7.9 9.6 19 5.6 0.2 3.3 3 0 0 3 3 3 0 Nanos RNA binding domain Fer4_14 PF13394.6 ORF41704 - 5.2 7.2 6.7 59 3.8 0.1 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain Bowman-Birk_leg PF00228.20 ORF41704 - 8.3 6.9 26.9 3.4 8.2 2.6 4.0 4 0 0 4 4 4 0 Bowman-Birk serine protease inhibitor family HEV_ORF1 PF02444.16 ORF4157 - 0.1 13.2 3.2 8.3 7.0 0.7 2.2 1 1 1 2 2 2 0 Hepatitis E virus ORF-2 (Putative capsid protein) MOR2-PAG1_mid PF14228.6 ORF41147 - 1.7 6.2 5.3 1.8 6.1 5.3 1.0 1 0 0 1 1 1 0 Cell morphogenesis central region SR-25 PF10500.9 ORF40091 - 1.1 8.8 8.4 1.6 8.3 8.4 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Proteasom_PSMB PF10508.9 ORF40033 - 4.3e-08 32.1 0.5 4.8e-08 31.9 0.5 1.0 1 0 0 1 1 1 1 Proteasome non-ATPase 26S subunit DBINO PF13892.6 ORF3974 - 0.019 15.3 2.9 0.028 14.8 2.6 1.4 1 1 0 1 1 1 0 DNA-binding domain Cwf_Cwc_15 PF04889.12 ORF39443 - 0.16 11.7 9.3 0.2 11.3 9.3 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DUF1604 PF07713.13 ORF39323 - 0.027 14.3 0.0 0.065 13.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) MciZ PF13072.6 ORF36705 - 0.15 11.9 6.2 1.1 9.1 0.1 2.8 3 0 0 3 3 3 0 Mother cell inhibitor of FtsZ SET PF00856.28 ORF36563 - 3.1e-06 27.7 0.0 3.7e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 SET domain LRR_RI_capping PF18779.1 ORF35604 - 8.1 6.2 6.8 38 4.1 0.1 3.2 3 0 0 3 3 3 0 Capping Ribonuclease inhibitor Leucine Rich Repeat CDC45 PF02724.14 ORF34810 - 0.015 13.6 2.3 0.016 13.6 2.3 1.0 1 0 0 1 1 1 0 CDC45-like protein TFIIF_alpha PF05793.12 ORF34810 - 0.055 12.1 16.1 0.065 11.8 16.1 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Presenilin PF01080.17 ORF34810 - 0.061 12.1 3.2 0.07 11.9 3.2 1.2 1 0 0 1 1 1 0 Presenilin DNA_pol_phi PF04931.13 ORF34810 - 0.062 11.4 8.0 0.079 11.1 8.0 1.0 1 0 0 1 1 1 0 DNA polymerase phi SLC12 PF03522.15 ORF34810 - 0.077 12.0 2.9 0.083 11.9 2.9 1.0 1 0 0 1 1 1 0 Solute carrier family 12 SR-25 PF10500.9 ORF34810 - 0.17 11.5 18.1 0.21 11.2 18.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein NPR3 PF03666.13 ORF34810 - 0.27 10.0 4.3 0.3 9.8 4.3 1.3 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF3827 PF12877.7 ORF34810 - 0.54 8.6 10.5 0.66 8.3 10.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) RR_TM4-6 PF06459.12 ORF34810 - 3.9 7.2 10.0 4.4 7.0 10.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CCDC106 PF15794.5 ORF34810 - 4.1 7.0 16.5 4.9 6.8 16.5 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 TamB PF04357.13 ORF3477 - 0.0069 15.7 1.7 0.0078 15.5 1.7 1.1 1 0 0 1 1 1 1 TamB, inner membrane protein subunit of TAM complex Flexi_CP_N PF08358.10 ORF3477 - 0.058 13.4 0.1 0.17 11.9 0.1 1.8 1 0 0 1 1 1 0 Carlavirus coat Phasin PF05597.11 ORF3477 - 0.084 12.9 0.4 0.15 12.1 0.3 1.5 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Herpeto_peptide PF14409.6 ORF33524 - 0.97 9.7 4.1 12 6.2 0.2 3.0 3 0 0 3 3 3 0 Ribosomally synthesized peptide in Herpetosiphon Pox_LP_H2 PF03356.15 ORF32395 - 1.6 8.5 7.9 0.5 10.2 5.3 1.5 1 1 1 2 2 2 0 Viral late protein H2 Saf_2TM PF18303.1 ORF29728 - 0.067 12.8 0.1 0.091 12.4 0.1 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain LapA_dom PF06305.11 ORF29728 - 0.076 12.8 0.2 0.11 12.3 0.2 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain VIR_N PF15912.5 ORF29308 - 0.017 14.8 12.6 0.019 14.6 12.6 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal DUF592 PF04574.13 ORF27328 - 0.026 14.3 0.1 0.032 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF592) DUF2990 PF11693.8 ORF26490 - 0.17 12.1 0.8 0.51 10.5 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2990) Orn_DAP_Arg_deC PF00278.22 ORF26451 - 0.11 12.7 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ribosomal_L13 PF00572.18 ORF25850 - 4.5e-57 191.7 0.3 5.2e-57 191.5 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L13 IMS_C PF11799.8 ORF25850 - 0.097 13.4 0.0 0.12 13.1 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family C-terminal domain OTU PF02338.19 ORF25063 - 4.4e-22 78.9 0.0 5.8e-22 78.5 0.0 1.2 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF25063 - 3.7e-05 23.3 0.0 0.013 14.9 0.0 2.1 2 0 0 2 2 2 2 Peptidase C65 Otubain DHHC PF01529.20 ORF23351 - 1.2e-13 51.3 15.2 1.2e-13 51.3 15.2 2.6 2 1 0 2 2 2 1 DHHC palmitoyltransferase Herpes_LMP2 PF07415.11 ORF23351 - 0.017 14.0 1.8 0.019 13.8 1.8 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein GDI PF00996.18 ORF23351 - 0.047 12.2 0.1 0.058 11.9 0.1 1.0 1 0 0 1 1 1 0 GDP dissociation inhibitor Zn_peptidase_2 PF04298.12 ORF23351 - 0.092 12.1 2.5 0.11 11.8 2.5 1.2 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase Phage_holin_3_6 PF07332.11 ORF23351 - 0.41 10.7 2.5 0.53 10.4 2.5 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III UQ_con PF00179.26 ORF21560 - 1.4e-41 141.4 0.0 1.6e-41 141.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF21560 - 0.0025 17.5 0.0 0.003 17.3 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B REV PF00424.18 ORF19225 - 0.35 10.9 3.9 0.14 12.2 0.3 1.9 1 1 1 2 2 2 0 REV protein (anti-repression trans-activator protein) NCD1 PF04904.13 ORF1910 - 8.3 6.5 16.7 11 6.1 0.4 4.3 4 0 0 4 4 4 0 NAB conserved region 1 (NCD1) PhoR PF11808.8 ORF18909 - 0.29 11.6 5.3 0.39 11.1 0.4 2.1 2 0 0 2 2 2 0 Phosphate regulon sensor protein PhoR PH PF00169.29 ORF18381 - 1.3e-12 48.2 0.1 1.8e-12 47.7 0.1 1.2 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF18381 - 3.8e-08 33.5 0.3 5.6e-08 33.0 0.3 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain Atg14 PF10186.9 ORF18381 - 0.0059 15.7 0.1 0.0073 15.4 0.1 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 PH_11 PF15413.6 ORF18381 - 0.016 15.6 4.5 1.3 9.5 4.5 2.3 1 1 0 1 1 1 0 Pleckstrin homology domain zf-RING_UBOX PF13445.6 ORF152020 - 1.9e-06 27.8 9.9 5.6e-06 26.3 9.9 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF152020 - 3.3e-06 26.9 9.7 9.1e-06 25.5 9.7 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF152020 - 9.2e-05 22.2 11.8 0.00027 20.7 11.8 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF152020 - 9.4e-05 22.7 18.2 0.00021 21.5 17.3 2.2 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 ORF152020 - 0.00015 21.6 9.9 0.00042 20.2 9.9 1.8 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF152020 - 0.00089 19.1 8.3 0.00089 19.1 8.3 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF152020 - 0.0037 17.4 10.5 0.0037 17.4 10.5 2.2 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING zf-rbx1 PF12678.7 ORF152020 - 0.0048 17.2 15.5 0.0048 17.2 15.5 1.9 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF152020 - 0.2 11.4 13.5 0.38 10.6 12.8 1.9 1 1 0 1 1 1 0 RING-like zinc finger PSI_PsaE PF02427.17 ORF151785 - 4.7e-24 83.8 1.3 6.3e-24 83.4 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE cNMP_binding PF00027.29 ORF150431 - 5.9e-15 55.1 0.0 7.3e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain zf-CCHC PF00098.23 ORF150431 - 0.00016 21.6 0.7 0.00025 21.0 0.7 1.3 1 0 0 1 1 1 1 Zinc knuckle Seryl_tRNA_N PF02403.22 ORF149903 - 0.036 14.3 0.1 0.067 13.4 0.1 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Abhydrolase_4 PF08386.10 ORF148877 - 1.5e-11 44.3 0.1 5.3e-09 36.1 0.0 2.1 1 1 1 2 2 2 2 TAP-like protein PP2C PF00481.21 ORF14846 - 2.4e-05 24.1 0.1 4.1e-05 23.3 0.1 1.3 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF14846 - 0.0017 18.3 0.0 0.0029 17.6 0.0 1.4 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Fn3-like PF14310.6 ORF148238 - 4.4e-09 36.3 0.0 1e-08 35.1 0.0 1.6 2 0 0 2 2 2 1 Fibronectin type III-like domain Cupin_4 PF08007.12 ORF147482 - 0.0082 15.6 0.0 0.0089 15.5 0.0 1.1 1 0 0 1 1 1 1 Cupin superfamily protein Sugarporin_N PF11471.8 ORF147015 - 0.38 10.7 0.1 0.38 10.7 0.1 1.8 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension KIAA1430 PF13879.6 ORF144256 - 0.011 16.5 8.0 0.84 10.4 2.8 2.1 2 0 0 2 2 2 0 KIAA1430 homologue DUF3552 PF12072.8 ORF144256 - 0.048 13.1 1.2 0.072 12.5 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) Peptidase_M3_N PF08439.10 ORF144256 - 0.048 13.9 2.4 6.3 7.1 0.0 2.9 3 0 0 3 3 3 0 Oligopeptidase F DUF4321 PF14209.6 ORF142999 - 0.017 14.9 0.7 0.027 14.3 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4321) DUF1759 PF03564.15 ORF142454 - 0.0039 17.1 0.3 0.0057 16.6 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) Phage_Gp23 PF10669.9 ORF142454 - 0.094 13.1 1.9 0.14 12.5 1.9 1.3 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) PHD PF00628.29 ORF140972 - 0.021 14.7 0.2 0.035 14.0 0.2 1.4 1 0 0 1 1 1 0 PHD-finger CC2D2AN-C2 PF15625.6 ORF140925 - 0.02 14.6 0.1 0.028 14.2 0.1 1.2 1 0 0 1 1 1 0 CC2D2A N-terminal C2 domain Gly-rich_Ago1 PF12764.7 ORF136832 - 0.091 13.6 7.6 0.17 12.7 7.5 1.6 1 1 0 1 1 1 0 Glycine-rich region of argonaut DUF3123 PF11321.8 ORF136832 - 0.33 11.7 7.3 0.085 13.5 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3123) zf-RING_2 PF13639.6 ORF134415 - 6.3e-10 39.2 14.9 6.3e-10 39.2 14.9 2.2 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF134415 - 1.2e-05 25.0 12.1 1.2e-05 25.0 12.1 3.0 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF134415 - 4.2e-05 23.3 12.5 4.2e-05 23.3 12.5 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF134415 - 0.0022 17.8 14.6 0.0022 17.8 14.6 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF134415 - 0.0024 18.1 11.4 0.0024 18.1 11.4 2.0 2 1 0 2 2 2 1 RING-H2 zinc finger domain DUF4548 PF15081.6 ORF134415 - 0.014 15.2 2.8 0.017 15.0 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4548) zf-RING_UBOX PF13445.6 ORF134415 - 0.05 13.6 6.8 0.05 13.6 6.8 2.8 3 0 0 3 3 3 0 RING-type zinc-finger RcsF PF16358.5 ORF132104 - 4.7e-50 168.3 0.2 6.2e-50 167.8 0.2 1.1 1 0 0 1 1 1 1 RcsF lipoprotein DUF4156 PF13698.6 ORF132104 - 0.054 13.8 0.0 0.077 13.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) DUF4692 PF15763.5 ORF132104 - 0.073 13.5 0.0 0.094 13.2 0.0 1.2 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) DUF5006 PF16397.5 ORF132104 - 0.23 10.6 0.1 0.4 9.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5006) SPATA19 PF15212.6 ORF131728 - 0.02 15.1 1.0 0.035 14.3 0.2 1.8 1 1 1 2 2 2 0 Spermatogenesis-associated protein 19, mitochondrial DUF5496 PF17600.2 ORF131728 - 0.064 13.3 0.1 0.1 12.6 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5496) DUF3496 PF12001.8 ORF131728 - 0.088 13.2 8.8 0.14 12.5 8.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) Cdh1_DBD_1 PF18196.1 ORF131728 - 0.14 12.5 7.1 0.14 12.5 6.1 1.5 1 1 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 DUF1087 PF06465.13 ORF131432 - 0.019 15.0 0.0 0.028 14.4 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) Terminase_6C PF17289.2 ORF131432 - 0.19 11.8 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 Terminase RNaseH-like domain Ribosomal_L13 PF00572.18 ORF131120 - 1.4e-57 193.3 0.4 1.6e-57 193.2 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L13 DUF4658 PF15555.6 ORF130971 - 0.16 12.0 1.5 0.3 11.2 1.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) ATP-synt_E PF05680.12 ORF129136 - 0.95 9.8 7.6 1.6 9.1 7.6 1.6 1 1 0 1 1 1 0 ATP synthase E chain LysE PF01810.18 ORF12906 - 2.1e-06 27.4 11.4 2.3e-06 27.2 11.4 1.1 1 0 0 1 1 1 1 LysE type translocator zf-RING_2 PF13639.6 ORF128719 - 7.8e-11 42.1 8.9 1.7e-10 41.0 8.9 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF128719 - 2.1e-06 27.4 1.4 2.1e-06 27.4 1.4 2.3 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF128719 - 2.3e-05 24.6 12.6 8.8e-05 22.7 12.6 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF128719 - 0.00022 21.0 7.2 0.00022 21.0 7.2 2.1 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF128719 - 0.0024 17.6 10.6 0.0024 17.6 10.6 2.2 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF128719 - 0.0034 17.5 8.3 0.0034 17.5 8.3 2.3 2 1 0 2 2 2 1 FANCL C-terminal domain zf-RING_UBOX PF13445.6 ORF128719 - 0.0054 16.7 1.5 0.0054 16.7 1.5 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zinc_ribbon_9 PF14369.6 ORF128719 - 0.012 15.8 5.1 0.05 13.9 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon zf-RING_5 PF14634.6 ORF128719 - 0.03 14.3 7.0 0.03 14.3 7.0 1.9 1 1 1 2 2 2 0 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF128719 - 0.053 13.4 3.8 0.053 13.4 3.8 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF128719 - 0.06 13.4 8.6 0.24 11.5 8.6 2.0 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Baculo_RING PF05883.11 ORF128719 - 0.14 12.1 4.9 0.22 11.5 4.9 1.5 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain RINGv PF12906.7 ORF128719 - 0.22 11.7 13.1 0.055 13.6 9.4 1.9 1 1 1 2 2 2 0 RING-variant domain zf-C3HC4_3 PF13920.6 ORF128719 - 0.33 10.9 12.4 0.067 13.1 8.6 1.8 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF128719 - 2 8.1 10.2 1.8 8.3 8.4 1.9 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF128719 - 5.3 7.3 11.9 21 5.4 8.8 2.6 1 1 2 3 3 3 0 zinc finger of C3HC4-type, RING Ribosomal_L5_C PF00673.21 ORF128419 - 2.4e-41 139.8 0.0 3.1e-41 139.4 0.0 1.1 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 ORF128419 - 9.1e-19 67.6 0.2 1.7e-18 66.7 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 DUF2862 PF11061.8 ORF128419 - 0.09 12.6 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2862) MspA PF09203.11 ORF128419 - 0.14 12.0 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 MspA zf-CSL PF05207.13 ORF125790 - 0.84 9.4 5.1 1.8 8.4 1.8 2.1 2 0 0 2 2 2 0 CSL zinc finger MFS_1 PF07690.16 ORF125452 - 1.6e-06 27.3 0.0 1.6e-06 27.3 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Cupin_2 PF07883.11 ORF1252 - 0.00073 19.2 0.0 0.0032 17.1 0.0 1.9 2 0 0 2 2 2 1 Cupin domain FAT PF02259.23 ORF12488 - 0.17 11.0 0.1 0.26 10.5 0.1 1.2 1 0 0 1 1 1 0 FAT domain Osmo_MPGsynth PF09488.10 ORF124624 - 0.18 10.5 0.1 0.22 10.2 0.1 1.0 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) T2SSN PF01203.19 ORF124352 - 0.084 13.1 3.1 0.51 10.5 1.8 2.0 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein N Ribosomal_L27e PF01777.18 ORF118852 - 1.3e-23 83.1 8.5 1.9e-23 82.6 8.5 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 ORF118852 - 0.019 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 KOW motif Actin PF00022.19 ORF118268 - 2.9e-15 55.8 0.0 3.3e-15 55.6 0.0 1.1 1 0 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF118268 - 0.06 12.2 0.0 0.075 11.8 0.0 1.1 1 0 0 1 1 1 0 MreB/Mbl protein PSD5 PF07637.11 ORF117362 - 0.12 12.7 0.9 0.98 9.8 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1595) SSL_OB PF09199.10 ORF116159 - 0.07 13.5 0.1 0.14 12.5 0.1 1.5 1 0 0 1 1 1 0 Staphylococcal superantigen-like OB-fold domain RNA_pol_Rpb2_2 PF04561.14 ORF115411 - 0.0035 17.0 0.8 0.0047 16.6 0.8 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 DUF2637 PF10935.8 ORF11511 - 0.048 13.6 0.1 0.071 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2637) SPT_ssu-like PF11779.8 ORF111223 - 0.25 11.0 6.0 0.64 9.7 2.2 2.3 2 0 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like MPTase-PolyVal PF18818.1 ORF10937 - 0.016 15.2 0.5 0.023 14.7 0.5 1.2 1 0 0 1 1 1 0 Metallopeptidase superfamily domain SF-assemblin PF06705.11 ORF10937 - 0.019 14.3 1.7 0.027 13.8 1.7 1.3 1 0 0 1 1 1 0 SF-assemblin/beta giardin T7SS_ESX_EspC PF10824.8 ORF10937 - 0.044 14.3 0.5 0.43 11.1 0.4 2.0 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm DUF2379 PF09543.10 ORF10937 - 0.062 13.5 5.3 0.053 13.7 3.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2379) Phage_Mu_Gam PF07352.12 ORF10937 - 0.078 12.9 3.1 1.1 9.2 0.3 2.1 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein Apolipoprotein PF01442.18 ORF10937 - 0.1 12.4 8.8 0.14 12.0 8.8 1.2 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF2203 PF09969.9 ORF10937 - 0.28 11.9 3.5 0.27 11.9 0.9 1.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) RasGAP_C PF03836.15 ORF10937 - 0.31 11.2 2.7 3.2 7.9 1.2 2.1 1 1 1 2 2 2 0 RasGAP C-terminus Exonuc_VII_L PF02601.15 ORF10937 - 0.39 10.3 3.9 0.43 10.1 3.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit RTC PF01137.21 ORF107769 - 0.001 18.3 0.0 0.0022 17.3 0.0 1.5 2 0 0 2 2 2 1 RNA 3'-terminal phosphate cyclase Spore_permease PF03845.13 ORF105204 - 0.14 10.9 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Spore germination protein IL1_propep PF02394.16 ORF103549 - 0.012 16.5 0.4 0.019 15.9 0.4 1.4 1 0 0 1 1 1 0 Interleukin-1 propeptide PACT_coil_coil PF10495.9 ORF103549 - 0.049 14.2 0.6 0.3 11.7 0.6 2.0 1 1 0 1 1 1 0 Pericentrin-AKAP-450 domain of centrosomal targeting protein DUF3182 PF11379.8 ORF102439 - 0.28 10.1 0.0 0.38 9.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3182) Ribosomal_L27e PF01777.18 ORF101743 - 1.3e-23 83.1 8.5 1.9e-23 82.6 8.5 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 ORF101743 - 0.019 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 KOW motif BACON PF13004.7 ORF100852 - 0.061 13.3 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Putative binding domain, N-terminal zf-LITAF-like PF10601.9 ORF100357 - 4.1e-14 52.6 18.5 5.3e-14 52.2 18.5 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain tRNA-synt_1g PF09334.11 ORF100357 - 0.13 11.0 0.0 0.2 10.4 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) DUF2079 PF09852.9 NODE_46183_length_421_cov_1.637306_g38377_i0forward_frame_1 - 0.32 9.8 3.2 0.35 9.7 3.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) DUF4867 PF16161.5 NODE_46177_length_421_cov_2.865285_g38371_i0reverse_frame_1 - 0.16 11.4 0.1 0.2 11.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4867) LBR_tudor PF09465.10 NODE_46177_length_421_cov_2.865285_g38371_i0forward_frame_1 - 0.00012 21.8 0.1 0.00027 20.7 0.1 1.5 1 0 0 1 1 1 1 Lamin-B receptor of TUDOR domain FGGY_C PF02782.16 NODE_46177_length_421_cov_2.865285_g38371_i0forward_frame_1 - 0.064 13.0 0.0 0.075 12.7 0.0 1.1 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain UPF0182 PF03699.13 NODE_46172_length_421_cov_3.163212_g38366_i0reverse_frame_1 - 5.9 4.9 6.7 6.7 4.7 6.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) DUF2207 PF09972.9 NODE_46172_length_421_cov_3.163212_g38366_i0reverse_frame_1 - 7.3 5.2 4.9 8.6 5.0 4.9 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) GWT1 PF06423.12 NODE_46172_length_421_cov_3.163212_g38366_i0reverse_frame_1 - 9.1 6.4 7.4 5.4 7.1 5.1 1.5 1 1 0 1 1 1 0 GWT1 RHS_repeat PF05593.14 NODE_46169_length_421_cov_3.505181_g38363_i0forward_frame_1 - 6e-21 74.5 23.6 1.5e-09 38.2 0.9 5.3 1 1 4 6 6 6 6 RHS Repeat GerE PF00196.19 NODE_46150_length_421_cov_89.163212_g38345_i0forward_frame_1 - 0.031 13.8 0.1 0.13 11.8 0.0 1.9 1 1 1 2 2 2 0 Bacterial regulatory proteins, luxR family PhrC_PhrF PF11131.8 NODE_46146_length_421_cov_104.404145_g38341_i0forward_frame_1 - 0.06 12.9 2.2 0.06 12.9 2.2 1.9 2 0 0 2 2 2 0 Rap-phr extracellular signalling Myb_DNA-bind_7 PF15963.5 NODE_46138_length_421_cov_210.020725_g38333_i0reverse_frame_1 - 1.2e-22 79.6 0.4 2e-22 78.9 0.4 1.3 1 0 0 1 1 1 1 Myb DNA-binding like Myb_DNA-binding PF00249.31 NODE_46138_length_421_cov_210.020725_g38333_i0reverse_frame_1 - 8.4e-08 32.3 0.3 6.7e-07 29.4 0.1 2.1 2 0 0 2 2 2 1 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 NODE_46138_length_421_cov_210.020725_g38333_i0reverse_frame_1 - 0.0001 22.4 0.4 0.00015 21.9 0.4 1.3 1 0 0 1 1 1 1 SANT/Myb-like domain of DAMP1 Myticin-prepro PF10690.9 NODE_46119_length_422_cov_1.695090_g38315_i0reverse_frame_1 - 0.068 13.4 0.5 0.11 12.8 0.5 1.3 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Orf78 PF06024.12 NODE_46117_length_422_cov_1.754522_g38313_i0reverse_frame_1 - 0.91 9.9 3.4 0.71 10.2 1.7 1.7 1 1 0 1 1 1 0 Orf78 (ac78) IL22 PF14565.6 NODE_46117_length_422_cov_1.754522_g38313_i0forward_frame_1 - 0.014 15.6 1.6 0.04 14.2 1.6 1.8 1 1 0 1 1 1 0 Interleukin 22 IL-10-related T-cell-derived-inducible factor MANEC PF07502.14 NODE_46099_length_422_cov_3.950904_g38295_i0forward_frame_1 - 0.037 14.3 3.9 0.037 14.3 3.9 1.6 1 1 0 1 1 1 0 MANEC domain DUF1298 PF06974.13 NODE_46098_length_422_cov_3.987080_g38294_i0forward_frame_1 - 6.7e-06 26.1 0.1 9.5e-06 25.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Prokineticin PF06607.11 NODE_46096_length_422_cov_28.524548_g38292_i0reverse_frame_1 - 0.016 15.5 0.7 0.029 14.7 0.7 1.4 1 0 0 1 1 1 0 Prokineticin zf-CCCH_8 PF18633.1 NODE_46095_length_422_cov_35.506460_g38291_i0forward_frame_1 - 0.062 13.4 1.7 0.12 12.5 1.7 1.4 1 0 0 1 1 1 0 Zinc-finger antiviral protein (ZAP) zinc finger domain 3 BUD22 PF09073.10 NODE_46089_length_422_cov_75.105943_g38285_i0forward_frame_1 - 0.00041 19.8 18.5 0.00041 19.8 18.5 2.1 1 1 1 2 2 2 1 BUD22 PIEZO PF15917.5 NODE_46089_length_422_cov_75.105943_g38285_i0forward_frame_1 - 0.52 9.7 10.8 0.65 9.4 10.8 1.2 1 0 0 1 1 1 0 Piezo MCM_bind PF09739.9 NODE_46089_length_422_cov_75.105943_g38285_i0forward_frame_1 - 2.5 6.4 6.6 3.9 5.8 6.6 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor DUSP PF06337.12 NODE_46082_length_422_cov_86.103359_g38278_i0forward_frame_1 - 1.2e-06 29.0 0.1 1.4e-06 28.8 0.1 1.2 1 0 0 1 1 1 1 DUSP domain Ribosomal_L3 PF00297.22 NODE_46078_length_422_cov_91.640827_g38274_i0reverse_frame_1 - 7.2e-33 114.1 0.0 9.3e-33 113.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L3 2-Hacid_dh_C PF02826.19 NODE_46076_length_422_cov_95.416021_g38272_i0forward_frame_1 - 2.8e-05 23.5 0.0 4.3e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sulfotransfer_2 PF03567.14 NODE_46068_length_422_cov_132.253230_g38264_i0forward_frame_1 - 0.022 14.7 2.1 0.038 13.9 2.1 1.5 1 1 0 1 1 1 0 Sulfotransferase family Gp45_2 PF17470.2 NODE_46066_length_422_cov_142.211886_g38262_i0reverse_frame_1 - 0.039 13.9 0.9 0.085 12.8 0.9 1.7 1 1 0 1 1 1 0 Phage gene product 45.2 Sec20 PF03908.13 NODE_46066_length_422_cov_142.211886_g38262_i0forward_frame_1 - 0.074 13.0 0.7 0.17 11.8 0.2 1.9 1 1 0 1 1 1 0 Sec20 Flavodoxin_5 PF12724.7 NODE_46055_length_422_cov_228.105943_g38251_i0reverse_frame_1 - 0.026 14.8 0.0 0.031 14.5 0.0 1.1 1 0 0 1 1 1 0 Flavodoxin domain Prominin PF05478.11 NODE_46055_length_422_cov_228.105943_g38251_i0forward_frame_1 - 1.5 6.6 3.8 1.8 6.4 3.8 1.1 1 0 0 1 1 1 0 Prominin Ribosomal_L21e PF01157.18 NODE_46052_length_422_cov_296.188630_g38248_i0reverse_frame_1 - 5.9e-29 99.9 0.2 9.1e-29 99.3 0.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L21e Carb_anhydrase PF00194.21 NODE_46049_length_422_cov_563.124031_g38245_i0forward_frame_1 - 1.4e-20 73.9 0.0 2.1e-20 73.3 0.0 1.2 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DUF2227 PF09988.9 NODE_46040_length_423_cov_1.551546_g38238_i0reverse_frame_1 - 0.058 13.3 0.1 0.084 12.8 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized metal-binding protein (DUF2227) DUF2623 PF11115.8 NODE_46039_length_423_cov_1.703608_g38237_i0reverse_frame_1 - 0.1 12.7 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2623) RB_B PF01857.20 NODE_46039_length_423_cov_1.703608_g38237_i0forward_frame_1 - 0.021 14.8 0.7 0.028 14.5 0.7 1.2 1 0 0 1 1 1 0 Retinoblastoma-associated protein B domain ACT PF01842.25 NODE_46033_length_423_cov_2.115979_g38231_i0reverse_frame_1 - 0.00012 21.7 0.1 0.00018 21.2 0.1 1.3 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 NODE_46033_length_423_cov_2.115979_g38231_i0reverse_frame_1 - 0.0027 18.2 0.0 0.0083 16.7 0.0 1.7 1 1 0 1 1 1 1 ACT domain HupH_C PF04809.13 NODE_46011_length_423_cov_63.396907_g38209_i0reverse_frame_1 - 0.2 11.4 0.3 0.31 10.7 0.3 1.2 1 0 0 1 1 1 0 HupH hydrogenase expression protein, C-terminal conserved region EPV_E5 PF08135.11 NODE_45998_length_423_cov_94.829897_g38196_i0reverse_frame_1 - 0.28 11.6 10.9 0.44 10.9 10.9 1.3 1 0 0 1 1 1 0 Major transforming protein E5 family DJ-1_PfpI PF01965.24 NODE_45992_length_423_cov_113.402062_g38190_i0forward_frame_1 - 1.3e-15 57.6 0.0 1.5e-15 57.4 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family MARVEL PF01284.23 NODE_45991_length_423_cov_115.541237_g38189_i0forward_frame_1 - 0.0033 17.5 0.4 0.004 17.2 0.4 1.2 1 0 0 1 1 1 1 Membrane-associating domain FAM176 PF14851.6 NODE_45991_length_423_cov_115.541237_g38189_i0forward_frame_1 - 0.13 11.9 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 FAM176 family GPHH PF16905.5 NODE_45982_length_423_cov_300.783505_g38180_i0forward_frame_1 - 0.06 13.1 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 Voltage-dependent L-type calcium channel, IQ-associated DUF2499 PF10693.9 NODE_45981_length_423_cov_317.994845_g38179_i0reverse_frame_1 - 0.072 13.4 0.0 0.13 12.6 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2499) zf-RanBP PF00641.18 NODE_45980_length_423_cov_459.121134_g38178_i0reverse_frame_1 - 9.9e-10 37.6 6.5 1.5e-09 37.0 6.5 1.3 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others Rrn6 PF10214.9 NODE_45980_length_423_cov_459.121134_g38178_i0reverse_frame_1 - 0.13 10.7 4.0 0.15 10.5 4.0 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor CDC45 PF02724.14 NODE_45980_length_423_cov_459.121134_g38178_i0reverse_frame_1 - 9.6 4.4 7.3 9.5 4.4 7.3 1.0 1 0 0 1 1 1 0 CDC45-like protein Bacteriocin_IId PF09221.10 NODE_45980_length_423_cov_459.121134_g38178_i0forward_frame_1 - 0.13 12.4 6.1 0.3 11.3 6.1 1.6 1 0 0 1 1 1 0 Bacteriocin class IId cyclical uberolysin-like Herpes_UL32 PF06070.11 NODE_45980_length_423_cov_459.121134_g38178_i0forward_frame_1 - 1.3 6.7 8.1 1.4 6.6 8.1 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 Acyl-thio_N PF12590.8 NODE_45978_length_423_cov_566.146907_g35117_i1reverse_frame_1 - 0.017 15.7 1.4 0.02 15.5 1.4 1.2 1 0 0 1 1 1 0 Acyl-ATP thioesterase MRPL52 PF18699.1 NODE_45978_length_423_cov_566.146907_g35117_i1reverse_frame_1 - 0.095 12.9 3.9 0.71 10.1 1.7 2.3 2 0 0 2 2 2 0 Mitoribosomal protein mL52 DUF2682 PF10909.8 NODE_45969_length_424_cov_1.768638_g38169_i0reverse_frame_3 - 0.35 11.4 4.9 5.9 7.5 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2682) TrkA_N PF02254.18 NODE_45969_length_424_cov_1.768638_g38169_i0reverse_frame_2 - 0.35 11.1 4.1 0.34 11.2 1.0 2.1 1 1 1 2 2 2 0 TrkA-N domain RNA_pol_Rpb1_R PF05001.13 NODE_45969_length_424_cov_1.768638_g38169_i0forward_frame_3 - 3 8.4 19.6 45 4.7 0.3 6.2 5 0 0 5 5 5 0 RNA polymerase Rpb1 C-terminal repeat Metallophos PF00149.28 NODE_45968_length_424_cov_1.894602_g38168_i0reverse_frame_3 - 5e-05 23.9 0.4 5.8e-05 23.7 0.4 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PGK PF00162.19 NODE_45968_length_424_cov_1.894602_g38168_i0reverse_frame_3 - 1.1 8.1 3.3 5.9 5.7 0.4 2.0 2 0 0 2 2 2 0 Phosphoglycerate kinase PH PF00169.29 NODE_45958_length_424_cov_3.017995_g38159_i0reverse_frame_2 - 2.5e-06 28.0 0.2 3.4e-06 27.5 0.2 1.2 1 0 0 1 1 1 1 PH domain PH_3 PF14593.6 NODE_45958_length_424_cov_3.017995_g38159_i0reverse_frame_2 - 0.0014 18.7 0.1 0.0018 18.4 0.1 1.2 1 0 0 1 1 1 1 PH domain PH_4 PF15404.6 NODE_45958_length_424_cov_3.017995_g38159_i0reverse_frame_2 - 0.0068 16.2 1.0 0.29 10.9 0.1 2.1 1 1 1 2 2 2 2 Pleckstrin homology domain Mcp5_PH PF12814.7 NODE_45958_length_424_cov_3.017995_g38159_i0reverse_frame_2 - 0.042 14.0 0.2 0.076 13.1 0.1 1.5 1 1 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology DUF2237 PF09996.9 NODE_45958_length_424_cov_3.017995_g38159_i0reverse_frame_2 - 0.042 13.9 0.0 0.053 13.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2237) EF-hand_7 PF13499.6 NODE_45951_length_424_cov_4.071979_g38152_i0reverse_frame_3 - 0.00024 21.5 0.0 0.00044 20.6 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_45951_length_424_cov_4.071979_g38152_i0reverse_frame_3 - 0.00056 19.6 0.0 0.37 10.9 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 NODE_45951_length_424_cov_4.071979_g38152_i0reverse_frame_3 - 0.002 17.5 0.1 0.019 14.5 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 NODE_45951_length_424_cov_4.071979_g38152_i0reverse_frame_3 - 0.11 12.0 0.2 0.46 10.1 0.0 2.1 2 0 0 2 2 2 0 EF hand AcetDehyd-dimer PF09290.11 NODE_45950_length_424_cov_4.113111_g38151_i0forward_frame_2 - 3.3e-59 199.0 0.8 3.6e-59 198.9 0.8 1.0 1 0 0 1 1 1 1 Prokaryotic acetaldehyde dehydrogenase, dimerisation 7TM-7TMR_HD PF07698.11 NODE_45948_length_424_cov_5.056555_g38149_i0reverse_frame_3 - 0.13 12.0 0.5 0.17 11.6 0.5 1.1 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase DUF2811 PF10929.8 NODE_45948_length_424_cov_5.056555_g38149_i0forward_frame_2 - 0.6 10.4 3.1 11 6.4 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2811) DUF3667 PF12412.8 NODE_45947_length_424_cov_12.526992_g38148_i0reverse_frame_3 - 0.02 14.4 0.8 0.037 13.5 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) NIR_SIR PF01077.22 NODE_45945_length_424_cov_20.593830_g38146_i0forward_frame_3 - 0.16 11.4 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain Spo7_2_N PF15407.6 NODE_45945_length_424_cov_20.593830_g38146_i0forward_frame_2 - 0.35 10.5 2.4 51 3.6 0.0 3.1 2 1 1 3 3 3 0 Sporulation protein family 7 MT PF12777.7 NODE_45939_length_424_cov_75.025707_g38140_i0forward_frame_2 - 1.1e-10 41.1 0.4 1.3e-10 40.9 0.4 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor DEK_C PF08766.11 NODE_45939_length_424_cov_75.025707_g38140_i0forward_frame_2 - 0.098 12.6 0.9 1.1 9.2 0.7 2.5 2 1 0 2 2 2 0 DEK C terminal domain Mt_ATP-synt_D PF05873.12 NODE_45939_length_424_cov_75.025707_g38140_i0forward_frame_2 - 0.11 12.4 2.4 0.35 10.7 1.1 2.0 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) SPATIAL PF15256.6 NODE_45936_length_424_cov_92.550129_g38137_i0reverse_frame_2 - 1.4 9.2 4.2 1.8 8.8 4.2 1.4 1 1 0 1 1 1 0 SPATIAL Rrn6 PF10214.9 NODE_45932_length_424_cov_112.290488_g38133_i0forward_frame_3 - 6.9 5.0 38.3 7.8 4.9 38.3 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor PI3K_1B_p101 PF10486.9 NODE_45932_length_424_cov_112.290488_g38133_i0forward_frame_3 - 7.4 4.2 22.3 8.6 4.0 22.3 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit Peroxin-3 PF04882.12 NODE_45932_length_424_cov_112.290488_g38133_i0forward_frame_3 - 9.9 5.0 21.9 13 4.6 21.9 1.1 1 0 0 1 1 1 0 Peroxin-3 Herpes_UL25 PF01499.16 NODE_45930_length_424_cov_124.467866_g38131_i0forward_frame_2 - 0.037 12.5 2.3 0.04 12.4 2.3 1.0 1 0 0 1 1 1 0 Herpesvirus UL25 family DUF775 PF05603.12 NODE_45930_length_424_cov_124.467866_g38131_i0forward_frame_2 - 0.058 12.9 3.3 0.076 12.5 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF775) FGF-BP1 PF06473.12 NODE_45924_length_424_cov_186.028278_g38125_i0forward_frame_2 - 0.06 13.2 0.1 0.087 12.6 0.1 1.2 1 0 0 1 1 1 0 FGF binding protein 1 (FGF-BP1) DUF3446 PF11928.8 NODE_45924_length_424_cov_186.028278_g38125_i0forward_frame_2 - 1.8 8.9 7.6 0.45 10.8 0.3 2.1 2 0 0 2 2 2 0 Early growth response N-terminal domain Reoviridae_Vp9 PF08978.10 NODE_45923_length_424_cov_193.961440_g38124_i0reverse_frame_3 - 0.024 13.8 0.1 0.033 13.4 0.1 1.1 1 0 0 1 1 1 0 Reoviridae VP9 Met_asp_mut_E PF06368.11 NODE_45920_length_424_cov_225.724936_g38121_i0reverse_frame_3 - 0.27 9.7 0.0 0.32 9.4 0.0 1.0 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) PAXX PF15384.6 NODE_45919_length_424_cov_243.974293_g2068_i1reverse_frame_3 - 0.051 13.3 0.0 0.077 12.7 0.0 1.3 1 0 0 1 1 1 0 PAXX, PAralog of XRCC4 and XLF, also called C9orf142 BBS2_N PF14781.6 NODE_45919_length_424_cov_243.974293_g2068_i1reverse_frame_3 - 0.085 12.8 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal DUF45 PF01863.17 NODE_45905_length_425_cov_2.020513_g38109_i0reverse_frame_2 - 0.91 9.5 12.5 1.1 9.2 12.5 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF45 DUF3090 PF11290.8 NODE_45905_length_425_cov_2.020513_g38109_i0reverse_frame_2 - 1.4 8.7 7.1 0.18 11.6 3.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3090) Nup88 PF10168.9 NODE_45905_length_425_cov_2.020513_g38109_i0reverse_frame_2 - 3.8 5.2 20.3 4.3 5.0 20.3 1.0 1 0 0 1 1 1 0 Nuclear pore component HU-CCDC81_bac_2 PF18175.1 NODE_45905_length_425_cov_2.020513_g38109_i0reverse_frame_2 - 4.9 7.1 12.5 1.1 9.2 0.8 2.8 1 1 2 3 3 3 0 CCDC81-like prokaryotic HU domain 2 DUF45 PF01863.17 NODE_45904_length_425_cov_2.123077_g38108_i0forward_frame_2 - 0.48 10.4 11.7 0.61 10.1 11.7 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF45 HU-CCDC81_bac_2 PF18175.1 NODE_45904_length_425_cov_2.123077_g38108_i0forward_frame_2 - 3.9 7.4 12.2 1 9.3 0.7 2.7 1 1 2 3 3 3 0 CCDC81-like prokaryotic HU domain 2 Nup88 PF10168.9 NODE_45904_length_425_cov_2.123077_g38108_i0forward_frame_2 - 6 4.5 20.3 7.2 4.3 20.3 1.0 1 0 0 1 1 1 0 Nuclear pore component # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks182.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks182.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks182.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks182.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ORC2 PF04084.14 NODE_45896_length_425_cov_2.617949_g38100_i0forward_frame_3 - 2.1e-19 69.6 0.6 2.5e-19 69.4 0.6 1.0 1 0 0 1 1 1 1 Origin recognition complex subunit 2 UPF0242 PF06785.11 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 5.9e-05 23.3 14.5 5.9e-05 23.3 14.5 1.9 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus Baculo_DNA_bind PF04786.12 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.0097 15.3 1.6 0.0097 15.3 1.6 1.4 2 0 0 2 2 2 1 ssDNA binding protein Peptidase_S41_N PF11918.8 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.075 13.3 4.1 0.13 12.4 4.1 1.3 1 0 0 1 1 1 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP Exonuc_VII_L PF02601.15 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.31 10.6 9.0 0.4 10.2 9.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF883 PF05957.13 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.38 11.4 2.8 2.3 8.9 0.0 2.6 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF4168 PF13767.6 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 0.9 10.8 9.3 0.4 11.9 2.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4168) Nup54 PF13874.6 NODE_45894_length_425_cov_2.800000_g38098_i0forward_frame_3 - 7.5 6.6 13.6 19 5.4 0.2 2.2 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 HXXEE PF13787.6 NODE_45892_length_425_cov_2.874359_g38096_i0reverse_frame_2 - 0.53 11.1 6.2 0.58 11.0 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function with HXXEE motif Longin PF13774.6 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.0011 19.0 0.1 0.47 10.5 0.0 2.3 2 0 0 2 2 2 2 Regulated-SNARE-like domain HR1 PF02185.16 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.027 14.6 3.7 0.18 11.9 1.1 2.8 1 1 1 2 2 2 0 Hr1 repeat Poty_PP PF08440.10 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.027 13.5 4.0 0.019 14.1 2.1 1.6 1 1 1 2 2 2 0 Potyviridae polyprotein FTO_CTD PF12934.7 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.034 13.9 0.7 0.31 10.8 0.2 1.9 1 1 1 2 2 2 0 FTO C-terminal domain DUF3837 PF12939.7 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.1 13.0 2.8 0.085 13.3 1.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) Phage_Mu_Gam PF07352.12 NODE_45889_length_425_cov_3.112821_g38093_i0reverse_frame_2 - 0.14 12.1 7.2 0.15 12.0 6.5 1.6 1 1 0 1 1 1 0 Bacteriophage Mu Gam like protein LOH1CR12 PF10158.9 NODE_45887_length_425_cov_3.261538_g38091_i0reverse_frame_2 - 0.00023 21.2 0.5 0.00029 20.8 0.5 1.1 1 0 0 1 1 1 1 Tumour suppressor protein Adeno_E3_15_3 PF03307.14 NODE_45887_length_425_cov_3.261538_g38091_i0reverse_frame_2 - 0.11 12.5 0.2 0.14 12.1 0.2 1.2 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region DUF3746 PF12562.8 NODE_45887_length_425_cov_3.261538_g38091_i0forward_frame_2 - 0.035 14.0 0.7 0.075 13.0 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3746) MTCP1 PF08991.10 NODE_45886_length_425_cov_3.376923_g38090_i0reverse_frame_3 - 0.63 10.3 3.9 0.22 11.8 0.9 1.7 2 0 0 2 2 2 0 Mature-T-Cell Proliferation I type tRNA_anti-like PF12869.7 NODE_45885_length_425_cov_3.517949_g38089_i0reverse_frame_3 - 0.082 12.5 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 tRNA_anti-like NIR_SIR PF01077.22 NODE_45880_length_425_cov_20.541026_g38084_i0forward_frame_3 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain Rhabdo_NV PF02484.15 NODE_45877_length_425_cov_39.300000_g38081_i0forward_frame_3 - 0.014 15.5 0.1 0.041 14.0 0.0 1.8 1 1 1 2 2 2 0 Rhabdovirus Non-virion protein DUF1804 PF08822.11 NODE_45875_length_425_cov_53.797436_g38079_i0reverse_frame_2 - 0.16 11.9 0.4 13 5.7 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1804) O-antigen_lig PF13425.6 NODE_45869_length_425_cov_68.748718_g38073_i0forward_frame_2 - 0.093 11.5 5.2 0.11 11.3 5.2 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Cep57_MT_bd PF06657.13 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_3 - 0.00073 19.9 0.3 0.0016 18.8 0.3 1.5 1 0 0 1 1 1 1 Centrosome microtubule-binding domain of Cep57 OmdA PF13376.6 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_3 - 0.015 15.2 0.1 0.032 14.2 0.1 1.5 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated bZIP_1 PF00170.21 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_3 - 0.032 14.3 4.3 0.032 14.3 4.3 2.2 2 0 0 2 2 2 0 bZIP transcription factor DivIC PF04977.15 NODE_45868_length_425_cov_70.410256_g38072_i0forward_frame_3 - 0.11 12.2 2.4 0.58 10.0 2.8 1.9 2 0 0 2 2 2 0 Septum formation initiator Erf4 PF10256.9 NODE_45867_length_425_cov_74.697436_g38071_i0forward_frame_2 - 0.048 13.8 0.4 0.066 13.3 0.4 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family FTA2 PF13095.6 NODE_45866_length_425_cov_75.717949_g38070_i0forward_frame_2 - 0.0089 15.7 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 WD40 PF00400.32 NODE_45859_length_425_cov_99.666667_g38063_i0reverse_frame_2 - 0.019 15.8 0.0 0.064 14.1 0.0 1.9 2 0 0 2 2 2 0 WD domain, G-beta repeat RseC_MucC PF04246.12 NODE_45849_length_425_cov_187.097436_g38053_i0forward_frame_2 - 0.15 12.0 0.3 0.48 10.4 0.1 1.8 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC NEMP PF10225.9 NODE_45849_length_425_cov_187.097436_g38053_i0forward_frame_2 - 0.17 11.5 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 NEMP family SCAB-Ig PF16709.5 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_3 - 5.1 7.2 4.6 2.9 8.0 0.3 2.3 2 1 1 3 3 3 0 Ig domain of plant-specific actin-binding protein Glutaredoxin PF00462.24 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_2 - 0.31 11.3 0.2 0.31 11.3 0.2 1.9 2 0 0 2 2 2 0 Glutaredoxin KASH PF10541.9 NODE_45846_length_425_cov_215.561538_g38051_i0forward_frame_2 - 0.33 11.2 5.5 0.43 10.9 3.9 2.0 1 1 0 1 1 1 0 Nuclear envelope localisation domain DUF5465 PF17553.2 NODE_45835_length_426_cov_1.626598_g38041_i0reverse_frame_2 - 1.6 9.5 7.2 0.25 12.0 2.7 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5465) GFO_IDH_MocA_C PF02894.17 NODE_45835_length_426_cov_1.626598_g38041_i0forward_frame_2 - 0.2 11.7 1.2 0.26 11.3 0.4 1.6 2 0 0 2 2 2 0 Oxidoreductase family, C-terminal alpha/beta domain Helicase_RecD PF05127.14 NODE_45831_length_426_cov_2.207161_g38037_i0reverse_frame_2 - 1.2e-14 54.6 6.3 2.5e-07 30.7 1.4 2.2 1 1 1 2 2 2 2 Helicase AAA_30 PF13604.6 NODE_45831_length_426_cov_2.207161_g38037_i0reverse_frame_2 - 2.5e-05 24.1 0.9 3.6e-05 23.6 0.9 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_45831_length_426_cov_2.207161_g38037_i0reverse_frame_2 - 0.0046 17.4 0.0 0.0064 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 NODE_45831_length_426_cov_2.207161_g38037_i0reverse_frame_2 - 0.064 12.8 0.2 0.081 12.5 0.2 1.4 1 1 0 1 1 1 0 AAA domain Med15_fungi PF05397.12 NODE_45826_length_426_cov_2.874680_g38032_i0reverse_frame_2 - 0.07 13.4 3.3 2.6 8.3 0.1 2.4 2 1 0 2 2 2 0 Mediator complex subunit 15 SAC3_GANP PF03399.16 NODE_45826_length_426_cov_2.874680_g38032_i0forward_frame_2 - 0.13 11.7 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 SAC3/GANP family DcuC PF03606.15 NODE_45824_length_426_cov_3.107417_g38030_i0forward_frame_3 - 1.1e-43 149.4 10.8 1.2e-43 149.3 10.8 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier RNase_T PF00929.24 NODE_45822_length_426_cov_3.301790_g38028_i0forward_frame_3 - 0.0098 16.4 0.0 0.018 15.6 0.0 1.5 1 1 0 1 1 1 1 Exonuclease QSregVF_b PF12843.7 NODE_45822_length_426_cov_3.301790_g38028_i0forward_frame_3 - 0.13 12.2 0.1 0.41 10.6 0.0 1.8 2 0 0 2 2 2 0 Putative quorum-sensing-regulated virulence factor HlyIII PF03006.20 NODE_45818_length_426_cov_14.616368_g38024_i0forward_frame_3 - 8.7e-22 77.9 1.6 1e-21 77.7 1.6 1.0 1 0 0 1 1 1 1 Haemolysin-III related YrhK PF14145.6 NODE_45818_length_426_cov_14.616368_g38024_i0forward_frame_3 - 0.1 12.4 3.6 7.5 6.5 0.0 2.4 2 1 0 2 2 2 0 YrhK-like protein NIR_SIR PF01077.22 NODE_45817_length_426_cov_20.488491_g38023_i0reverse_frame_3 - 0.074 12.6 0.0 0.091 12.3 0.0 1.2 1 1 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain DD_K PF12121.8 NODE_45817_length_426_cov_20.488491_g38023_i0reverse_frame_2 - 0.18 11.9 5.7 4.9 7.4 0.4 2.4 2 0 0 2 2 2 0 Dermaseptin DUF702 PF05142.12 NODE_45816_length_426_cov_26.173913_g38022_i0reverse_frame_2 - 0.87 10.1 6.5 1.4 9.3 6.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF702) CytB6-F_Fe-S PF08802.10 NODE_45816_length_426_cov_26.173913_g38022_i0forward_frame_2 - 0.7 10.0 6.8 0.97 9.5 1.0 2.6 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit TMEM89 PF15098.6 NODE_45815_length_426_cov_27.616368_g38021_i0reverse_frame_2 - 0.087 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 TMEM89 protein family 2OG-FeII_Oxy_2 PF13532.6 NODE_45815_length_426_cov_27.616368_g38021_i0forward_frame_3 - 2.9e-09 37.4 0.1 3.6e-09 37.1 0.1 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily PI3K_rbd PF00794.18 NODE_45813_length_426_cov_36.263427_g38019_i0reverse_frame_2 - 0.022 14.9 0.0 0.041 14.0 0.0 1.5 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain NOG1 PF06858.14 NODE_45806_length_426_cov_66.902813_g38012_i0reverse_frame_3 - 0.028 14.2 0.1 0.37 10.6 0.0 2.2 1 1 1 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) RVT_N PF13655.6 NODE_45806_length_426_cov_66.902813_g38012_i0reverse_frame_2 - 0.0052 17.0 2.8 0.14 12.4 2.2 2.2 1 1 1 2 2 2 2 N-terminal domain of reverse transcriptase EOS1 PF12326.8 NODE_45806_length_426_cov_66.902813_g38012_i0forward_frame_3 - 0.028 14.4 1.7 0.037 14.0 1.7 1.1 1 0 0 1 1 1 0 N-glycosylation protein DUF4201 PF13870.6 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 1.4e-25 90.0 20.6 1.8e-25 89.7 20.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) YkyA PF10368.9 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 0.01 15.5 15.7 0.018 14.7 15.7 1.3 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein AAA_13 PF13166.6 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 0.17 10.5 15.0 0.2 10.3 15.0 1.0 1 0 0 1 1 1 0 AAA domain TMPIT PF07851.13 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 0.33 10.1 8.3 0.38 9.9 8.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein DivIVA PF05103.13 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 0.7 10.0 13.7 0.4 10.8 8.5 2.4 2 1 0 2 2 2 0 DivIVA protein Atg14 PF10186.9 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 1.9 7.5 13.0 2.4 7.2 13.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ZapB PF06005.12 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 2.1 8.9 16.8 0.19 12.2 6.0 2.7 1 1 1 2 2 2 0 Cell division protein ZapB Exonuc_VII_L PF02601.15 NODE_45804_length_426_cov_72.171355_g38010_i0forward_frame_2 - 3.3 7.2 8.0 4.1 6.9 8.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Y_phosphatase3 PF13350.6 NODE_45797_length_426_cov_79.654731_g38003_i0forward_frame_3 - 0.18 11.7 0.2 0.22 11.4 0.2 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family TruD PF01142.18 NODE_45795_length_426_cov_85.941176_g38001_i0reverse_frame_3 - 0.0034 16.3 0.0 0.0037 16.1 0.0 1.3 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) RCC1_2 PF13540.6 NODE_45790_length_426_cov_113.097187_g37996_i0forward_frame_2 - 0.0019 17.9 6.0 0.13 12.1 0.2 3.3 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_45790_length_426_cov_113.097187_g37996_i0forward_frame_2 - 0.029 14.5 0.1 27 4.8 0.0 3.0 2 1 1 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Urocanase_C PF17392.2 NODE_45790_length_426_cov_113.097187_g37996_i0forward_frame_2 - 0.23 10.9 4.5 0.22 10.9 0.9 2.0 1 1 1 2 2 2 0 Urocanase C-terminal domain RCC1_2 PF13540.6 NODE_45789_length_426_cov_113.199488_g37995_i0forward_frame_2 - 0.0019 18.0 6.0 0.13 12.1 0.2 3.4 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_45789_length_426_cov_113.199488_g37995_i0forward_frame_2 - 0.029 14.5 0.1 27 4.8 0.0 3.0 2 1 1 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Urocanase_C PF17392.2 NODE_45789_length_426_cov_113.199488_g37995_i0forward_frame_2 - 0.23 10.9 4.5 0.22 10.9 0.9 2.0 1 1 1 2 2 2 0 Urocanase C-terminal domain DUF2431 PF10354.9 NODE_45786_length_426_cov_124.774936_g37992_i0reverse_frame_3 - 4.5e-10 40.0 0.0 5.6e-10 39.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) Sugar_tr PF00083.24 NODE_45782_length_426_cov_153.562660_g37988_i0forward_frame_3 - 0.00097 18.1 0.0 0.0012 17.8 0.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter Ctr PF04145.15 NODE_45778_length_426_cov_164.641944_g37984_i0forward_frame_3 - 0.14 12.8 0.1 0.18 12.4 0.1 1.2 1 0 0 1 1 1 0 Ctr copper transporter family ACP_syn_III PF08545.10 NODE_45778_length_426_cov_164.641944_g37984_i0forward_frame_3 - 1.2 9.1 3.4 1.9 8.4 0.8 2.1 1 1 1 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DUF4083 PF13314.6 NODE_45778_length_426_cov_164.641944_g37984_i0forward_frame_2 - 1.2 9.1 2.8 1.9 8.5 2.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) DFRP_C PF16543.5 NODE_45774_length_426_cov_257.421995_g37981_i0forward_frame_2 - 0.0027 18.1 2.6 0.0056 17.2 2.4 1.9 1 1 0 1 1 1 1 DRG Family Regulatory Proteins, Tma46 Ribosomal_S27e PF01667.17 NODE_45766_length_426_cov_1374.038363_g37973_i0reverse_frame_2 - 2.1e-05 24.1 0.1 2.1e-05 24.1 0.1 2.4 3 1 0 3 3 3 1 Ribosomal protein S27 O-ag_pol_Wzy PF14296.6 NODE_45766_length_426_cov_1374.038363_g37973_i0forward_frame_2 - 0.088 11.4 12.1 0.11 11.2 12.1 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy VIT_2 PF13757.6 ORF98140 - 0.23 11.3 0.8 0.43 10.5 0.8 1.4 1 0 0 1 1 1 0 Vault protein inter-alpha-trypsin domain Edc3_linker PF16598.5 ORF98098 - 0.3 11.8 7.8 0.099 13.3 4.8 1.8 1 1 1 2 2 2 0 Linker region of enhancer of mRNA-decapping protein 3 PDDEXK_6 PF04720.12 ORF97423 - 0.047 13.6 0.2 0.065 13.2 0.2 1.2 1 0 0 1 1 1 0 PDDEXK-like family of unknown function BMFP PF04380.13 ORF94247 - 0.12 12.9 0.0 0.22 12.0 0.0 1.4 1 0 0 1 1 1 0 Membrane fusogenic activity BLYB PF05289.11 ORF93980 - 0.014 15.6 0.3 0.027 14.7 0.0 1.6 2 0 0 2 2 2 0 Borrelia hemolysin accessory protein Viral_env_E26 PF11050.8 ORF93725 - 0.037 13.4 4.0 0.041 13.2 4.0 1.2 1 0 0 1 1 1 0 Virus envelope protein E26 Allexi_40kDa PF05549.11 ORF93725 - 0.21 11.1 3.9 0.16 11.4 2.7 1.5 1 1 1 2 2 2 0 Allexivirus 40kDa protein SirA PF10747.9 ORF93725 - 0.26 11.6 5.5 0.31 11.3 4.6 1.7 1 1 0 1 1 1 0 Sporulation inhibitor of replication protein SirA RVT_3 PF13456.6 ORF93452 - 0.015 15.1 0.1 0.095 12.5 0.0 2.0 1 1 1 2 2 2 0 Reverse transcriptase-like Mito_fiss_reg PF05308.11 ORF93173 - 0.0054 16.8 1.3 0.0062 16.7 1.3 1.1 1 0 0 1 1 1 1 Mitochondrial fission regulator Pkinase PF00069.25 ORF92873 - 4.3e-23 82.0 0.0 5.3e-23 81.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92873 - 3.4e-10 39.6 0.0 3.8e-10 39.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF92873 - 0.0061 15.9 0.0 0.0061 15.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like DUF872 PF05915.12 ORF90325 - 0.12 12.6 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) UPF0220 PF05255.11 ORF90325 - 0.22 11.1 1.2 1.5 8.3 0.2 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0220) EF-hand_1 PF00036.32 ORF89774 - 5.2e-05 22.5 0.0 9.6e-05 21.7 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF89774 - 0.00031 21.1 0.0 0.00049 20.5 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF89774 - 0.0031 17.3 0.0 0.0075 16.1 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF89774 - 0.0066 15.9 0.0 0.012 15.0 0.0 1.4 1 0 0 1 1 1 1 EF hand SPARC_Ca_bdg PF10591.9 ORF89774 - 0.031 14.6 0.1 0.53 10.6 0.0 2.3 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Pes-10 PF07149.11 ORF89774 - 0.048 12.7 1.1 0.053 12.6 1.1 1.0 1 0 0 1 1 1 0 Pes-10 EF-hand_8 PF13833.6 ORF89774 - 0.1 12.5 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain pair CSG2 PF16965.5 ORF89400 - 0.0069 15.4 1.3 0.0079 15.2 1.3 1.1 1 0 0 1 1 1 1 Ceramide synthase regulator PBP1_TM PF14812.6 ORF89400 - 0.028 14.8 4.0 0.028 14.8 4.0 1.7 1 1 1 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal TRAP-gamma PF07074.12 ORF89400 - 0.03 13.9 4.0 0.022 14.3 2.3 1.6 1 1 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Fungal_TACC PF12709.7 ORF88510 - 0.0078 16.6 0.9 0.0078 16.6 0.9 2.2 2 0 0 2 2 2 1 Fungal Transforming acidic coiled-coil (TACC) proteins KLRAQ PF10205.9 ORF88510 - 0.018 15.2 1.1 0.018 15.2 1.1 1.6 2 0 0 2 2 2 0 Predicted coiled-coil domain-containing protein Ferritin-like PF12902.7 ORF88510 - 0.024 14.5 1.5 0.03 14.2 0.8 1.5 1 1 1 2 2 2 0 Ferritin-like FNIP_M PF14637.6 ORF88510 - 0.11 12.5 2.6 0.17 11.9 2.2 1.4 1 1 0 1 1 1 0 Folliculin-interacting protein middle domain DUF948 PF06103.11 ORF88510 - 0.12 12.7 2.1 4.9 7.5 0.3 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) TBCA PF02970.16 ORF88510 - 0.17 12.3 3.5 2.7 8.4 0.2 2.7 2 1 1 3 3 3 0 Tubulin binding cofactor A Fib_alpha PF08702.10 ORF88510 - 0.23 11.6 7.5 0.079 13.1 3.5 1.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family zf-C4H2 PF10146.9 ORF88510 - 0.54 10.5 5.0 0.64 10.3 1.1 2.0 1 1 1 2 2 2 0 Zinc finger-containing protein LMP PF04778.12 ORF88510 - 4.1 7.3 15.6 1.7 8.5 7.0 2.1 1 1 1 2 2 2 0 LMP repeated region KIAA1430 PF13879.6 ORF84834 - 0.0019 18.9 5.2 0.0027 18.4 5.2 1.4 1 1 0 1 1 1 1 KIAA1430 homologue mRNA_stabil PF13929.6 ORF84834 - 0.019 14.0 0.3 0.02 13.9 0.3 1.1 1 0 0 1 1 1 0 mRNA stabilisation IKKbetaNEMObind PF12179.8 ORF84834 - 0.19 11.8 0.0 0.38 10.8 0.0 1.5 1 0 0 1 1 1 0 I-kappa-kinase-beta NEMO binding domain START PF01852.19 ORF83501 - 1.4e-08 34.4 0.0 1.8e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 START domain DUF4658 PF15555.6 ORF81678 - 0.00053 20.1 0.8 0.0009 19.4 0.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) DUF3394 PF11874.8 ORF81340 - 0.056 13.1 0.2 0.082 12.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3394) TPH PF13868.6 ORF81340 - 2.1 6.7 18.0 0.036 12.6 10.3 1.7 2 0 0 2 2 2 0 Trichohyalin-plectin-homology domain DUF4658 PF15555.6 ORF79783 - 0.00053 20.1 0.8 0.0009 19.4 0.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) TPR_12 PF13424.6 ORF78440 - 0.0084 16.4 0.2 0.56 10.5 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat SIT PF15330.6 ORF7750 - 0.0095 16.4 0.0 0.016 15.6 0.0 1.3 1 0 0 1 1 1 1 SHP2-interacting transmembrane adaptor protein, SIT DUF2818 PF10993.8 ORF7750 - 0.057 14.0 0.1 0.079 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2818) TFA2_Winged_2 PF18121.1 ORF75803 - 0.00083 19.0 1.3 0.0021 17.7 0.3 2.1 2 1 0 2 2 2 1 TFA2 Winged helix domain 2 TBP PF00352.21 ORF74549 - 6.4e-06 26.0 0.1 1.8e-05 24.6 0.1 1.8 1 0 0 1 1 1 1 Transcription factor TFIID (or TATA-binding protein, TBP) Ly49 PF08391.10 ORF72595 - 0.0051 17.2 3.6 0.0071 16.7 3.2 1.5 1 1 0 1 1 1 1 Ly49-like protein, N-terminal region HNHc_6 PF16784.5 ORF72595 - 0.0075 15.8 0.0 0.0088 15.6 0.0 1.2 1 0 0 1 1 1 1 Putative HNHc nuclease DUF3290 PF11694.8 ORF72595 - 0.086 12.8 0.7 0.13 12.2 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) Caudo_TAP PF02413.17 ORF72516 - 0.046 13.9 1.8 0.068 13.3 0.2 1.8 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK Zip PF02535.22 ORF72516 - 2.6 7.2 3.4 3.2 6.9 3.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF4658 PF15555.6 ORF71994 - 0.00053 20.1 0.8 0.0009 19.4 0.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) Peptidase_M13 PF01431.21 ORF71657 - 0.39 10.3 0.9 0.54 9.8 0.9 1.1 1 0 0 1 1 1 0 Peptidase family M13 Phlebovirus_G1 PF07243.11 ORF70537 - 1.1 7.5 4.0 1.4 7.2 4.0 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 GST_C_3 PF14497.6 ORF69868 - 0.0002 21.5 0.0 0.00033 20.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain PH_8 PF15409.6 ORF69868 - 0.18 12.1 0.0 0.18 12.1 0.0 1.6 2 0 0 2 2 2 0 Pleckstrin homology domain zf-C3H1 PF10650.9 ORF6809 - 0.027 14.2 0.5 0.065 13.0 0.5 1.7 1 0 0 1 1 1 0 Putative zinc-finger domain ExbD PF02472.16 ORF66852 - 8.6e-31 106.8 0.5 9.6e-31 106.7 0.5 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR NETI PF14044.6 ORF66852 - 0.17 11.7 0.1 12 5.7 0.0 2.3 2 0 0 2 2 2 0 NETI protein DUF4658 PF15555.6 ORF66424 - 0.026 14.6 0.6 0.042 14.0 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) HPIP_like PF18524.1 ORF66424 - 0.05 13.4 2.7 3.8 7.3 0.1 3.4 3 0 0 3 3 3 0 High potential iron-sulfur protein like DUF3027 PF11228.8 ORF66424 - 4.3 7.3 8.0 0.62 10.1 0.2 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF3027) FhuF PF06276.12 ORF64877 - 0.025 15.0 0.4 0.2 12.0 0.3 2.1 1 1 0 1 1 1 0 Ferric iron reductase FhuF-like transporter SHIPPO-rpt PF07004.12 ORF63060 - 0.14 13.1 5.6 0.16 12.9 0.1 3.0 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat RRM_1 PF00076.22 ORF62616 - 0.0045 16.8 0.1 0.0094 15.7 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glycoprotein_G PF00802.19 ORF62616 - 0.28 10.5 2.4 0.33 10.3 2.4 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Tash_PEST PF07708.11 ORF62616 - 0.36 11.1 3.0 0.71 10.1 3.0 1.5 1 0 0 1 1 1 0 Tash protein PEST motif CRAL_TRIO PF00650.20 ORF61859 - 2.2e-15 56.7 0.3 2.5e-15 56.5 0.3 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF61859 - 0.00021 21.5 0.6 0.00026 21.2 0.6 1.1 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain Rbsn PF11464.8 ORF6101 - 0.37 10.6 1.0 0.79 9.5 1.0 1.5 1 0 0 1 1 1 0 Rabenosyn Rab binding domain Sarcoglycan_2 PF05510.13 ORF59681 - 0.0072 15.1 0.9 0.0076 15.1 0.9 1.1 1 0 0 1 1 1 1 Sarcoglycan alpha/epsilon Conotoxin PF02950.17 ORF59681 - 0.075 14.1 0.2 0.14 13.1 0.2 1.5 1 0 0 1 1 1 0 Conotoxin BMFP PF04380.13 ORF59451 - 0.12 12.9 0.0 0.22 12.0 0.0 1.4 1 0 0 1 1 1 0 Membrane fusogenic activity Kinesin PF00225.23 ORF59060 - 1.2e-32 113.2 0.9 1.3e-32 113.0 0.9 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF59060 - 1.9e-23 83.0 1.0 4.4e-23 81.9 1.0 1.5 1 1 0 1 1 1 1 Microtubule binding AAA_22 PF13401.6 ORF59060 - 0.053 13.8 0.0 0.072 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF59060 - 0.092 12.5 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain MMM1 PF10296.9 ORF58664 - 0.0068 15.5 0.0 0.0072 15.4 0.0 1.0 1 0 0 1 1 1 1 Maintenance of mitochondrial morphology protein 1 TPIP1 PF15338.6 ORF58624 - 0.031 14.3 2.0 0.093 12.8 0.9 2.0 2 0 0 2 2 2 0 p53-regulated apoptosis-inducing protein 1 SpoU_methylase PF00588.19 ORF58588 - 1.7e-18 67.2 0.0 1.9e-18 67.0 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family Pep1_7 PF17232.2 ORF5778 - 8.7 6.9 12.4 0.83 10.2 0.7 2.9 2 1 1 3 3 3 0 Elicitor peptide 1-7 zf-B_box PF00643.24 ORF51866 - 6.2e-10 39.1 3.9 8.8e-10 38.6 3.9 1.2 1 0 0 1 1 1 1 B-box zinc finger DUF4298 PF14131.6 ORF51866 - 0.034 14.1 1.2 0.11 12.4 1.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4298) ARF7EP_C PF14949.6 ORF51866 - 0.088 13.4 0.8 0.088 13.4 0.8 1.9 2 0 0 2 2 2 0 ARF7 effector protein C-terminus Herpes_capsid PF06112.11 ORF4936 - 4.3 7.4 8.5 6.1 6.9 8.5 1.4 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein FATC PF02260.20 ORF47937 - 9.1e-14 51.0 0.0 1.4e-13 50.4 0.0 1.3 1 0 0 1 1 1 1 FATC domain PI3_PI4_kinase PF00454.27 ORF47937 - 1.3e-08 35.0 0.0 1.8e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DiS_P_DiS PF06750.13 ORF47428 - 0.025 14.7 0.2 0.051 13.7 0.2 1.6 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain Nebulin PF00880.18 ORF47146 - 0.062 13.2 3.7 2.7 8.0 1.8 2.9 2 1 0 2 2 2 0 Nebulin repeat DUF668 PF05003.12 ORF47146 - 0.25 11.9 3.5 1 9.9 0.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF668) DUF4658 PF15555.6 ORF4268 - 0.00053 20.1 0.8 0.0009 19.4 0.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) PI3_PI4_kinase PF00454.27 ORF418 - 5.1e-08 33.0 0.1 8e-08 32.4 0.1 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase UQ_con PF00179.26 ORF41209 - 8.5e-18 64.4 0.0 8.9e-18 64.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme NIF PF03031.18 ORF40346 - 1e-07 31.8 1.0 3e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase VWA_CoxE PF05762.14 ORF39655 - 0.051 12.9 7.7 0.075 12.4 7.7 1.2 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein Circo_capsid PF02443.15 ORF39655 - 0.81 9.2 11.0 0.98 9.0 11.0 1.2 1 0 0 1 1 1 0 Circovirus capsid protein Peptidase_A21 PF03566.13 ORF39655 - 1.2 7.4 4.5 1.2 7.3 4.5 1.1 1 0 0 1 1 1 0 Peptidase family A21 Pkinase PF00069.25 ORF3908 - 0.0029 17.0 0.2 0.0051 16.2 0.2 1.7 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF3908 - 0.0031 17.5 1.4 0.0051 16.8 1.4 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 ORF3908 - 0.0032 16.8 0.3 0.0078 15.5 0.1 1.6 1 1 1 2 2 2 1 Protein tyrosine kinase RIO1 PF01163.22 ORF3908 - 0.025 14.2 0.5 0.093 12.3 0.1 1.8 1 1 1 2 2 2 0 RIO1 family Choline_kinase PF01633.20 ORF3908 - 0.2 11.2 0.4 0.42 10.2 0.2 1.5 2 0 0 2 2 2 0 Choline/ethanolamine kinase Kelch_1 PF01344.25 ORF38745 - 2.3e-09 36.7 6.7 0.00019 20.9 0.0 3.5 3 1 0 3 3 3 3 Kelch motif Kelch_6 PF13964.6 ORF38745 - 1.3e-08 34.8 0.9 0.0062 16.8 0.2 3.0 3 0 0 3 3 3 2 Kelch motif Kelch_4 PF13418.6 ORF38745 - 8.1e-05 22.6 1.0 3.4 7.8 0.1 3.6 3 1 0 3 3 3 3 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF38745 - 0.00019 21.6 0.6 0.24 11.7 0.0 3.3 2 1 1 3 3 3 2 Galactose oxidase, central domain zf-CCHC_2 PF13696.6 ORF37392 - 0.00098 18.9 2.5 0.00098 18.9 2.5 2.0 2 0 0 2 2 2 1 Zinc knuckle zf-CCHC PF00098.23 ORF37392 - 0.0011 19.0 0.8 0.0011 19.0 0.8 2.3 2 0 0 2 2 2 1 Zinc knuckle ChpA-C PF03777.13 ORF37155 - 0.18 11.7 0.4 0.18 11.7 0.4 1.9 2 0 0 2 2 2 0 ChpA-C DUF2258 PF10015.9 ORF35956 - 0.043 13.9 0.1 0.13 12.4 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) DUF872 PF05915.12 ORF35523 - 1.8e-08 34.5 0.0 2.1e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) DUF2569 PF10754.9 ORF35523 - 0.064 13.7 0.1 0.078 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) N-glycanase_C PF09113.10 ORF32992 - 0.35 10.6 4.8 0.61 9.9 4.8 1.3 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal Rrn6 PF10214.9 ORF31842 - 0.48 8.9 8.3 0.63 8.5 8.3 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF2408 PF10303.9 ORF31803 - 0.59 10.7 9.1 0.77 10.3 9.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) CENP-H PF05837.12 ORF31803 - 3.3 8.2 8.8 1.1 9.7 4.2 2.0 2 0 0 2 2 2 0 Centromere protein H (CENP-H) CRAL_TRIO PF00650.20 ORF31792 - 6.1e-24 84.5 0.0 7.2e-24 84.3 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF31792 - 0.00021 21.5 0.0 0.00025 21.2 0.0 1.1 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain Hid1 PF12722.7 ORF31095 - 1.5e-08 33.3 0.1 1.6e-08 33.2 0.1 1.1 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein Dymeclin PF09742.9 ORF31095 - 1.1e-06 27.4 0.0 1.1e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein PerC PF06069.11 ORF31095 - 0.08 13.2 0.1 0.14 12.4 0.1 1.4 1 0 0 1 1 1 0 PerC transcriptional activator HTH_Tnp_4 PF13613.6 ORF30764 - 0.55 10.0 2.3 1.2 8.9 0.2 2.4 3 0 0 3 3 3 0 Helix-turn-helix of DDE superfamily endonuclease Histone PF00125.24 ORF26841 - 2.8e-19 69.8 0.0 3.7e-19 69.4 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 ORF26841 - 6.8e-13 48.1 0.1 6.8e-13 48.1 0.1 2.0 2 0 0 2 2 2 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 ORF26841 - 0.00024 21.3 0.0 0.00033 20.9 0.0 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Kinesin PF00225.23 ORF25328 - 1.2e-32 113.2 0.9 1.3e-32 113.0 0.9 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF25328 - 1.9e-23 83.0 1.0 4.4e-23 81.9 1.0 1.5 1 1 0 1 1 1 1 Microtubule binding AAA_22 PF13401.6 ORF25328 - 0.053 13.8 0.0 0.072 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF25328 - 0.092 12.5 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain DUF1381 PF07129.11 ORF23199 - 0.069 13.0 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) Thionin PF00321.17 ORF23002 - 0.022 15.2 7.0 0.022 15.2 7.0 2.4 3 0 0 3 3 3 0 Plant thionin Fez1 PF06818.15 ORF22516 - 0.00043 20.8 3.5 0.00048 20.6 3.5 1.2 1 0 0 1 1 1 1 Fez1 LepB_GAP_N PF18172.1 ORF22516 - 0.012 15.5 2.9 0.018 15.0 2.9 1.2 1 0 0 1 1 1 0 LepB GAP domain N-terminal subdomain DUF641 PF04859.12 ORF22516 - 0.037 14.4 5.1 0.046 14.0 5.1 1.4 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF5121 PF17165.4 ORF22516 - 0.067 13.6 0.1 0.12 12.8 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5121) Pkinase PF00069.25 ORF22222 - 6.5e-16 58.5 0.0 7.8e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22222 - 1.6e-15 57.1 0.0 1.8e-15 56.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase OpuAC PF04069.12 ORF21269 - 5.3e-19 68.8 0.8 6.6e-19 68.5 0.8 1.2 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system p25-alpha PF05517.12 ORF20108 - 0.0087 16.2 4.3 0.02 15.0 0.2 2.2 2 0 0 2 2 2 2 p25-alpha MazG_C PF18722.1 ORF18875 - 0.043 13.3 0.0 0.061 12.8 0.0 1.3 1 0 0 1 1 1 0 MazG C-terminal domain Yqai PF09466.10 ORF18875 - 0.09 13.1 0.0 20 5.6 0.0 2.2 2 0 0 2 2 2 0 Hypothetical protein Yqai GP3 PF03076.14 ORF18725 - 0.035 14.2 0.3 0.035 14.2 0.3 2.2 1 1 1 2 2 2 0 Equine arteritis virus GP3 Pkinase PF00069.25 ORF17377 - 8.4e-05 22.1 0.0 0.00011 21.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain SPATA9 PF15824.5 ORF16796 - 0.032 13.5 0.7 0.039 13.2 0.7 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 9 HrpB7 PF09486.10 ORF16247 - 0.088 13.2 0.9 0.11 12.9 0.9 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) FIVAR PF07554.13 ORF16247 - 0.11 13.3 0.5 0.11 13.3 0.5 2.5 1 1 1 2 2 2 0 FIVAR domain Arg_decarb_HB PF17810.1 ORF16247 - 0.17 12.2 0.0 0.46 10.8 0.0 1.7 2 0 0 2 2 2 0 Arginine decarboxylase helical bundle domain Baculo_PEP_C PF04513.12 ORF16247 - 0.48 10.5 3.6 14 5.8 3.6 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3813 PF12758.7 ORF16247 - 1.3 9.4 4.8 3.5 8.0 2.5 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3813) DUF948 PF06103.11 ORF16247 - 2.1 8.7 6.3 10 6.4 0.3 2.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) RNA_POL_M_15KD PF02150.16 ORF151938 - 3.2e-06 26.9 9.5 3.3e-06 26.9 4.8 2.6 2 1 0 2 2 2 1 RNA polymerases M/15 Kd subunit RecR PF02132.15 ORF151938 - 0.001 18.6 2.0 0.016 14.8 0.5 2.6 2 0 0 2 2 2 1 RecR protein Lar_restr_allev PF14354.6 ORF151938 - 0.001 19.4 0.9 0.001 19.4 0.9 2.5 2 1 0 2 2 2 1 Restriction alleviation protein Lar TFIIS_C PF01096.18 ORF151938 - 0.004 17.0 2.4 0.004 17.0 2.4 3.5 3 1 0 3 3 3 1 Transcription factor S-II (TFIIS) zf_UBZ PF18439.1 ORF151938 - 0.39 10.4 5.3 9.6 5.9 0.1 3.1 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger DUF3268 PF11672.8 ORF151938 - 0.56 10.5 6.6 6.3 7.2 1.2 2.3 2 0 0 2 2 2 0 zinc-finger-containing domain zf-RING_2 PF13639.6 ORF151938 - 9.4 6.7 13.1 22 5.5 4.3 3.7 3 1 0 3 3 3 0 Ring finger domain SHIPPO-rpt PF07004.12 ORF151773 - 0.14 13.1 5.6 0.16 12.9 0.1 3.0 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat Ferritin PF00210.24 ORF150410 - 8.2e-23 80.9 1.0 1.2e-22 80.4 1.0 1.3 1 0 0 1 1 1 1 Ferritin-like domain DUF1241 PF06840.11 ORF150410 - 0.089 12.4 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) DUF4658 PF15555.6 ORF150011 - 0.00053 20.1 0.8 0.0009 19.4 0.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) DUF3586 PF12131.8 ORF149946 - 0.023 14.9 3.1 0.023 14.9 3.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3586) Metallothio_6 PF05522.11 ORF149946 - 2.3 8.7 14.4 5.1 7.7 3.6 2.5 2 0 0 2 2 2 0 Metallothionein Cornichon PF03311.14 ORF149336 - 2.3e-07 31.2 14.1 3.4e-07 30.6 14.1 1.2 1 0 0 1 1 1 1 Cornichon protein Peptidase_M13 PF01431.21 ORF148841 - 0.39 10.3 0.9 0.54 9.8 0.9 1.1 1 0 0 1 1 1 0 Peptidase family M13 Med16 PF11635.8 ORF148603 - 0.16 9.8 1.7 0.19 9.6 1.7 1.1 1 0 0 1 1 1 0 Mediator complex subunit 16 DUF883 PF05957.13 ORF146257 - 0.2 12.3 4.4 0.29 11.8 4.4 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Casc1_N PF15927.5 ORF145054 - 0.0011 18.7 1.6 0.0015 18.3 1.6 1.2 1 0 0 1 1 1 1 Cancer susceptibility candidate 1 N-terminus DUF3896 PF13035.6 ORF145054 - 0.25 11.5 2.9 0.22 11.7 0.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3896) Ribosomal_S4 PF00163.19 ORF145054 - 0.99 10.4 7.7 0.85 10.6 6.5 1.5 1 1 0 1 1 1 0 Ribosomal protein S4/S9 N-terminal domain Macscav_rec PF03523.13 ORF143430 - 0.089 12.7 0.7 0.21 11.5 0.7 1.5 1 0 0 1 1 1 0 Macrophage scavenger receptor DUF872 PF05915.12 ORF143069 - 1.8e-08 34.5 0.0 2.1e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) DUF2569 PF10754.9 ORF143069 - 0.064 13.7 0.1 0.078 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) DUF4763 PF15960.5 ORF142614 - 0.087 12.1 0.5 0.12 11.6 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Aft1_HRA PF11786.8 ORF141294 - 9.2 6.7 10.5 21 5.5 10.5 1.6 1 1 0 1 1 1 0 Aft1 HRA domain DUF4658 PF15555.6 ORF141275 - 0.00053 20.1 0.8 0.0009 19.4 0.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) SET PF00856.28 ORF140054 - 3e-10 40.8 0.0 3.3e-10 40.6 0.0 1.1 1 0 0 1 1 1 1 SET domain eIF-5a PF01287.20 ORF13980 - 4.4e-07 29.9 0.2 1.1e-06 28.6 0.1 1.7 2 0 0 2 2 2 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 ORF13980 - 0.00096 19.1 0.2 0.0015 18.6 0.2 1.3 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain YolD PF08863.10 ORF13980 - 0.037 14.1 0.2 0.068 13.2 0.2 1.4 1 0 0 1 1 1 0 YolD-like protein DUF872 PF05915.12 ORF139358 - 1.8e-08 34.5 0.0 2.1e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) DUF2569 PF10754.9 ORF139358 - 0.064 13.7 0.1 0.078 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) Integrase_H2C2 PF17921.1 ORF138113 - 0.032 14.3 0.1 0.057 13.5 0.1 1.4 1 0 0 1 1 1 0 Integrase zinc binding domain RepB-RCR_reg PF10723.9 ORF137125 - 0.019 14.9 4.9 0.019 14.9 4.9 1.7 2 0 0 2 2 2 0 Replication regulatory protein RepB CAC1F_C PF16885.5 ORF137125 - 0.49 10.0 6.4 0.53 9.9 6.4 1.0 1 0 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term APOBEC3 PF18771.1 ORF137020 - 0.037 14.2 0.2 0.069 13.3 0.0 1.5 2 0 0 2 2 2 0 APOBEC3 PUL PF08324.11 ORF133740 - 2.3e-17 63.2 0.0 2.5e-17 63.0 0.0 1.0 1 0 0 1 1 1 1 PUL domain DUF4079 PF13301.6 ORF132825 - 1.5 9.0 5.7 3.1 7.9 5.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) DUF2408 PF10303.9 ORF132710 - 0.59 10.7 9.1 0.77 10.3 9.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) CENP-H PF05837.12 ORF132710 - 3.3 8.2 8.8 1.1 9.7 4.2 2.0 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Phage_holin_4_1 PF05105.12 ORF132326 - 0.028 14.6 0.2 0.028 14.6 0.2 1.7 1 1 0 1 1 1 0 Bacteriophage holin family DUF2408 PF10303.9 ORF131753 - 0.59 10.7 9.1 0.77 10.3 9.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) CENP-H PF05837.12 ORF131753 - 3.3 8.2 8.8 1.1 9.7 4.2 2.0 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Toxin_12 PF07740.12 ORF13131 - 0.016 15.9 2.2 0.016 15.9 2.2 3.0 4 0 0 4 4 4 0 Ion channel inhibitory toxin TPR_1 PF00515.28 ORF131053 - 0.11 12.3 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Glucan_synthase PF02364.15 ORF130736 - 0.015 13.5 0.0 0.017 13.3 0.0 1.1 1 0 0 1 1 1 0 1,3-beta-glucan synthase component VPS38 PF17649.1 ORF130736 - 0.035 13.0 0.3 0.37 9.6 0.2 1.9 2 0 0 2 2 2 0 Vacuolar protein sorting 38 DUF2417 PF10329.9 ORF129898 - 9.3 5.6 12.6 12 5.2 12.6 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) NCA2 PF08637.10 ORF128781 - 1.8e-06 27.4 0.0 2.2e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 ATP synthase regulation protein NCA2 BMFP PF04380.13 ORF128620 - 0.12 12.9 0.0 0.22 12.0 0.0 1.4 1 0 0 1 1 1 0 Membrane fusogenic activity LRR19-TM PF15176.6 ORF127677 - 0.4 10.7 1.1 0.53 10.3 1.1 1.3 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain BLYB PF05289.11 ORF126754 - 0.014 15.6 0.3 0.027 14.7 0.0 1.6 2 0 0 2 2 2 0 Borrelia hemolysin accessory protein DUF4604 PF15377.6 ORF125881 - 0.027 14.9 13.7 0.035 14.5 13.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) CDC45 PF02724.14 ORF125881 - 0.031 12.6 2.0 0.032 12.6 2.0 1.0 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF125881 - 0.083 11.0 7.6 0.1 10.7 7.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi Presenilin PF01080.17 ORF125881 - 0.12 11.2 2.7 0.13 11.0 2.7 1.2 1 0 0 1 1 1 0 Presenilin TFIIF_alpha PF05793.12 ORF125881 - 0.15 10.6 16.0 0.18 10.3 16.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) NPR3 PF03666.13 ORF125881 - 0.17 10.6 3.6 0.2 10.4 3.6 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 SR-25 PF10500.9 ORF125881 - 0.25 10.9 18.0 0.3 10.6 18.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF936 PF06075.12 ORF125881 - 1.6 7.6 10.2 1.7 7.5 10.2 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) DUF3827 PF12877.7 ORF125881 - 5.4 5.3 9.9 6.5 5.0 9.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) CCDC106 PF15794.5 ORF125881 - 8.4 6.0 16.1 11 5.6 16.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Ribonuc_L-PSP PF01042.21 ORF124817 - 2.8e-45 153.2 0.9 3.2e-45 153.0 0.9 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP YjgF_endoribonc PF14588.6 ORF124817 - 0.085 13.0 0.1 0.16 12.1 0.1 1.5 1 1 0 1 1 1 0 YjgF/chorismate_mutase-like, putative endoribonuclease Ctr PF04145.15 ORF122075 - 2.6e-10 41.1 10.3 2.4e-06 28.2 3.8 2.1 1 1 1 2 2 2 2 Ctr copper transporter family S1FA PF04689.13 ORF122075 - 0.13 12.5 1.8 0.45 10.7 0.1 2.2 2 0 0 2 2 2 0 DNA binding protein S1FA TRCF PF03461.15 ORF119506 - 7.6e-30 103.1 0.0 2.8e-29 101.3 0.0 1.7 2 0 0 2 2 2 1 TRCF domain OB_NTP_bind PF07717.16 ORF119395 - 3.5e-18 65.7 0.0 4.8e-18 65.3 0.0 1.2 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold PhyH PF05721.13 ORF117271 - 0.00025 21.4 0.0 0.00035 20.9 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) zf-met PF12874.7 ORF116270 - 0.087 13.2 4.1 0.1 13.0 0.5 2.5 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Myc_target_1 PF15179.6 ORF116270 - 0.15 12.0 9.4 0.21 11.5 9.4 1.3 1 0 0 1 1 1 0 Myc target protein 1 Conotoxin PF02950.17 ORF116270 - 7.4 7.7 6.6 0.8 10.8 1.7 1.9 2 0 0 2 2 2 0 Conotoxin SPATA9 PF15824.5 ORF115181 - 0.032 13.5 0.7 0.039 13.2 0.7 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 9 Spo7 PF03907.13 ORF114646 - 0.017 14.6 1.2 0.03 13.8 1.2 1.4 1 0 0 1 1 1 0 Spo7-like protein FAM183 PF14886.6 ORF1145 - 0.0093 16.7 0.1 0.013 16.2 0.1 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related ExbD PF02472.16 ORF114047 - 8.6e-31 106.8 0.5 9.6e-31 106.7 0.5 1.0 1 0 0 1 1 1 1 Biopolymer transport protein ExbD/TolR NETI PF14044.6 ORF114047 - 0.17 11.7 0.1 12 5.7 0.0 2.3 2 0 0 2 2 2 0 NETI protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks183.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks183.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks183.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks183.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EMP70 PF02990.16 ORF112007 - 0.055 12.1 0.1 0.067 11.8 0.1 1.1 1 0 0 1 1 1 0 Endomembrane protein 70 ATP-synt_Eps PF04627.13 ORF112007 - 0.13 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial ATP synthase epsilon chain ADP_ribosyl_GH PF03747.14 ORF111790 - 1.4e-05 25.0 0.7 2e-05 24.5 0.7 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Ninjurin PF04923.12 ORF111666 - 0.076 13.0 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Ninjurin Borrelia_P83 PF05262.11 ORF109047 - 0.0054 15.3 6.6 0.0068 14.9 6.6 1.0 1 0 0 1 1 1 1 Borrelia P83/100 protein HMG_box_2 PF09011.10 ORF109047 - 0.0057 17.2 0.3 0.0057 17.2 0.3 2.4 2 1 0 2 2 2 1 HMG-box domain ALMT PF11744.8 ORF109047 - 0.069 12.0 2.8 0.081 11.7 2.8 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Zip PF02535.22 ORF109047 - 0.12 11.6 1.4 0.12 11.6 1.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter YABBY PF04690.13 ORF109047 - 0.31 11.6 7.2 0.43 11.1 7.2 1.2 1 0 0 1 1 1 0 YABBY protein NPR3 PF03666.13 ORF109047 - 0.39 9.4 12.0 0.51 9.1 12.0 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 ORF109047 - 0.51 9.0 5.1 0.51 9.1 5.1 1.2 1 0 0 1 1 1 0 Presenilin Histone PF00125.24 ORF109047 - 0.56 10.6 8.0 0.84 10.0 8.0 1.4 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 CDC45 PF02724.14 ORF109047 - 1.6 6.9 6.8 1.7 6.9 6.8 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4770 PF15994.5 ORF109047 - 4.3 7.5 14.6 7.8 6.7 14.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4770) DUF5094 PF17015.5 ORF109047 - 8.9 6.4 13.1 14 5.7 13.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5094) GATA PF00320.27 ORF108574 - 1.3 8.7 5.1 1.5 8.5 0.2 2.8 3 0 0 3 3 3 0 GATA zinc finger Hint_2 PF13403.6 ORF107907 - 0.078 13.3 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Hint domain FAM199X PF15814.5 ORF106944 - 0.034 13.2 0.2 0.051 12.6 0.1 1.3 1 1 0 1 1 1 0 Protein family FAM199X Phage_holin_4_1 PF05105.12 ORF106871 - 0.028 14.6 0.2 0.028 14.6 0.2 1.7 1 1 0 1 1 1 0 Bacteriophage holin family ZapA PF05164.13 ORF10670 - 0.033 14.6 0.2 0.32 11.5 0.1 2.1 2 0 0 2 2 2 0 Cell division protein ZapA Fungal_TACC PF12709.7 ORF10670 - 0.059 13.8 0.7 0.059 13.8 0.7 2.5 3 0 0 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins Phage_tail_NK PF16532.5 ORF10670 - 0.088 12.4 0.2 0.33 10.6 0.1 1.7 1 1 1 2 2 2 0 Sf6-type phage tail needle knob or tip of some Caudovirales LSM PF01423.22 ORF10670 - 0.2 11.4 1.8 0.28 10.9 0.1 2.1 2 0 0 2 2 2 0 LSM domain LMBR1 PF04791.16 ORF106413 - 2.8 6.7 4.3 3.3 6.5 4.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein NAD_binding_11 PF14833.6 ORF104314 - 0.00072 19.8 0.0 0.0029 17.8 0.0 1.8 1 1 1 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Endonuclease_5 PF04493.14 ORF104310 - 3e-23 82.5 0.1 6.7e-23 81.4 0.0 1.5 2 0 0 2 2 2 1 Endonuclease V DUF99 PF01949.16 ORF104310 - 0.00092 18.7 0.0 0.0014 18.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF99 DUF5093 PF17011.5 ORF104310 - 0.005 17.1 0.8 0.0068 16.7 0.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5093) RRP7 PF12923.7 ORF104310 - 0.0052 16.9 1.0 0.0073 16.4 1.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain DUF755 PF05501.11 ORF104310 - 0.055 13.8 2.4 0.09 13.1 2.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Jas PF16135.5 ORF102325 - 1.2 9.3 6.3 12 6.2 0.4 2.5 2 0 0 2 2 2 0 TPL-binding domain in jasmonate signalling KLRAQ PF10205.9 ORF10154 - 0.00041 20.5 1.7 0.00041 20.5 1.7 1.6 2 0 0 2 2 2 1 Predicted coiled-coil domain-containing protein Fungal_TACC PF12709.7 ORF10154 - 0.031 14.7 3.4 0.042 14.3 0.6 2.3 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF1515 PF07439.11 ORF10154 - 0.12 12.5 0.7 0.18 11.9 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1515) DUF948 PF06103.11 ORF10154 - 0.36 11.1 2.7 15 5.9 0.7 2.3 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) zf-C4H2 PF10146.9 ORF10154 - 0.99 9.7 6.4 0.72 10.1 1.9 1.9 1 1 1 2 2 2 0 Zinc finger-containing protein TACC_C PF05010.14 ORF10154 - 1.1 9.0 9.3 0.68 9.7 4.1 2.0 2 0 0 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Uso1_p115_C PF04871.13 ORF10154 - 1.3 9.4 5.9 0.52 10.7 2.1 1.9 1 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Csm2_III-A PF03750.13 ORF10154 - 1.5 9.7 7.6 3.1 8.7 2.9 2.2 1 1 1 2 2 2 0 Csm2 Type III-A DUF4658 PF15555.6 ORF101101 - 0.00053 20.1 0.8 0.0009 19.4 0.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) Imm58 PF15581.6 ORF100760 - 0.071 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 58 OB_RNB PF08206.11 ORF100462 - 0.11 12.2 0.2 4.4 7.1 0.0 2.2 2 0 0 2 2 2 0 Ribonuclease B OB domain DUF4365 PF14280.6 ORF100462 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4365) Fer2 PF00111.27 NODE_46403_length_418_cov_2.600522_g38593_i0reverse_frame_1 - 8.2e-15 54.5 1.1 1.2e-14 54.1 1.1 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 NODE_46403_length_418_cov_2.600522_g38593_i0reverse_frame_1 - 0.011 15.7 0.6 0.016 15.2 0.6 1.3 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF3995 PF13160.6 NODE_46401_length_418_cov_2.634465_g38591_i0forward_frame_1 - 0.018 15.4 3.2 0.023 15.0 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) TMEM18 PF14770.6 NODE_46391_length_418_cov_3.579634_g38581_i0forward_frame_1 - 0.034 14.1 0.4 0.067 13.2 0.2 1.5 1 1 0 1 1 1 0 Transmembrane protein 18 DUF2222 PF09984.9 NODE_46388_length_418_cov_4.657963_g38578_i0forward_frame_1 - 6.4e-15 55.3 0.1 9.1e-15 54.8 0.1 1.2 1 0 0 1 1 1 1 Uncharacterised signal transduction histidine kinase domain (DUF2222) PTPlike_phytase PF14566.6 NODE_46383_length_418_cov_35.112272_g38573_i0reverse_frame_1 - 0.24 11.5 7.3 0.41 10.8 7.3 1.3 1 1 0 1 1 1 0 Inositol hexakisphosphate Gln-synt_C PF00120.24 NODE_46370_length_418_cov_77.603133_g38561_i0reverse_frame_1 - 0.0013 17.8 0.0 0.0016 17.5 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain DUF333 PF03891.15 NODE_46354_length_418_cov_111.080940_g38545_i0reverse_frame_1 - 0.044 14.0 1.4 25 5.2 0.0 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF333) Sex_peptide PF08138.11 NODE_46354_length_418_cov_111.080940_g38545_i0reverse_frame_1 - 0.16 12.2 2.4 5.8 7.1 0.0 2.4 2 0 0 2 2 2 0 Sex peptide (SP) family DUF5350 PF17299.2 NODE_46354_length_418_cov_111.080940_g38545_i0reverse_frame_1 - 0.61 10.6 3.1 3.1 8.3 1.6 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5350) PheRS_DBD2 PF18554.1 NODE_46354_length_418_cov_111.080940_g38545_i0forward_frame_1 - 3.1 7.8 6.2 8.9 6.4 0.9 2.4 2 0 0 2 2 2 0 PheRS DNA binding domain 2 UBA PF00627.31 NODE_46341_length_418_cov_210.394256_g38533_i0reverse_frame_1 - 0.0034 17.2 0.6 0.0067 16.3 0.6 1.4 1 0 0 1 1 1 1 UBA/TS-N domain CUE PF02845.16 NODE_46341_length_418_cov_210.394256_g38533_i0reverse_frame_1 - 0.15 11.8 0.1 0.43 10.3 0.0 1.7 2 0 0 2 2 2 0 CUE domain RR_TM4-6 PF06459.12 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.021 14.6 15.5 0.023 14.5 15.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 GAGA_bind PF06217.12 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.028 14.7 12.1 0.029 14.7 12.1 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Connexin PF00029.19 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.13 12.0 9.1 0.16 11.7 9.1 1.3 1 0 0 1 1 1 0 Connexin DUF1682 PF07946.14 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.25 10.5 23.9 0.31 10.2 23.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) RNA_pol_Rpc4 PF05132.14 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 0.28 11.6 9.4 0.32 11.4 9.4 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 DDHD PF02862.17 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 2 8.5 8.3 2.2 8.4 8.3 1.1 1 0 0 1 1 1 0 DDHD domain Coilin_N PF15862.5 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 2.3 8.0 21.7 1.4 8.7 19.9 1.7 2 0 0 2 2 2 0 Coilin N-terminus Presenilin PF01080.17 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 3.6 6.2 8.7 3.4 6.3 8.7 1.1 1 0 0 1 1 1 0 Presenilin EOS1 PF12326.8 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 4.5 7.2 6.6 5.5 6.9 6.6 1.2 1 0 0 1 1 1 0 N-glycosylation protein Peroxin-13_N PF04088.13 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 5.4 7.3 7.6 7.8 6.8 7.6 1.4 1 1 0 1 1 1 0 Peroxin 13, N-terminal region ALMT PF11744.8 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_1 - 8 5.2 15.3 8.6 5.1 15.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Tetraspanin PF00335.20 NODE_46332_length_419_cov_1.567708_g38524_i0reverse_frame_1 - 0.041 13.6 4.5 0.051 13.3 4.5 1.2 1 0 0 1 1 1 0 Tetraspanin family CoA_binding_3 PF13727.6 NODE_46321_length_419_cov_2.437500_g38513_i0reverse_frame_1 - 1.8 8.6 4.3 2.5 8.1 4.3 1.1 1 0 0 1 1 1 0 CoA-binding domain Nefa_Nip30_N PF10187.9 NODE_46316_length_419_cov_3.127604_g38508_i0reverse_frame_1 - 0.14 12.5 9.5 0.28 11.6 9.5 1.5 1 0 0 1 1 1 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 CarbpepA_inh PF02977.15 NODE_46310_length_419_cov_4.739583_g38502_i0reverse_frame_1 - 0.052 13.3 2.8 0.93 9.3 0.1 2.6 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor NinG PF05766.12 NODE_46303_length_419_cov_46.875000_g38495_i0reverse_frame_1 - 0.061 13.3 0.9 0.061 13.3 0.9 1.7 2 0 0 2 2 2 0 Bacteriophage Lambda NinG protein Polyketide_cyc2 PF10604.9 NODE_46297_length_419_cov_68.768229_g38489_i0reverse_frame_1 - 2.6e-05 24.5 0.2 3.2e-05 24.2 0.2 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport TSR PF18487.1 NODE_46296_length_419_cov_73.828125_g38488_i0forward_frame_1 - 0.051 13.8 0.2 1.7 8.9 0.0 2.3 2 0 0 2 2 2 0 Thrombospondin type 1 repeat CEP209_CC5 PF16574.5 NODE_46290_length_419_cov_81.390625_g38482_i0reverse_frame_1 - 0.13 12.4 3.3 0.17 12.1 3.3 1.1 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 Csm1_N PF18504.1 NODE_46290_length_419_cov_81.390625_g38482_i0reverse_frame_1 - 0.42 11.0 5.4 0.52 10.7 1.5 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF3925 PF13063.6 NODE_46284_length_419_cov_92.231771_g38476_i0reverse_frame_1 - 0.15 12.3 4.4 0.58 10.4 0.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3925) Apocytochr_F_C PF01333.19 NODE_46263_length_419_cov_3744.369792_g38455_i0reverse_frame_1 - 1.2e-35 122.1 0.1 1.5e-35 121.8 0.1 1.1 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF5006 PF16397.5 NODE_46263_length_419_cov_3744.369792_g38455_i0reverse_frame_1 - 0.00019 20.7 0.1 0.00024 20.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5006) RnfC_N PF13375.6 NODE_46263_length_419_cov_3744.369792_g38455_i0reverse_frame_1 - 0.039 13.9 0.3 2 8.4 0.1 2.2 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain DUF2723 PF11028.8 NODE_46261_length_420_cov_1.727273_g38453_i0forward_frame_1 - 0.021 14.8 0.6 0.023 14.6 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) Cas9_PI PF16595.5 NODE_46256_length_420_cov_2.218182_g38448_i0forward_frame_1 - 0.11 12.3 1.8 0.14 12.0 1.8 1.1 1 0 0 1 1 1 0 PAM-interacting domain of CRISPR-associated endonuclease Cas9 OrfB_Zn_ribbon PF07282.11 NODE_46255_length_420_cov_2.231169_g38447_i0reverse_frame_1 - 1.5 8.8 5.4 3.4 7.6 5.4 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain RCC1 PF00415.18 NODE_46254_length_420_cov_2.296104_g38446_i0forward_frame_1 - 5.4e-25 87.8 5.5 4.7e-11 43.1 0.1 3.4 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_46254_length_420_cov_2.296104_g38446_i0forward_frame_1 - 1.3e-16 59.9 11.2 1.3e-08 34.4 0.8 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RPE65 PF03055.15 NODE_46254_length_420_cov_2.296104_g38446_i0forward_frame_1 - 0.011 14.9 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 0 Retinal pigment epithelial membrane protein TMEM192 PF14802.6 NODE_46250_length_420_cov_2.441558_g38442_i0reverse_frame_1 - 0.1 11.7 0.2 0.13 11.3 0.2 1.1 1 0 0 1 1 1 0 TMEM192 family Ribosomal_S17 PF00366.20 NODE_46228_length_420_cov_62.644156_g38421_i0reverse_frame_1 - 2.8e-10 40.1 0.6 5.8e-10 39.1 0.6 1.4 1 0 0 1 1 1 1 Ribosomal protein S17 TilS PF09179.11 NODE_46213_length_420_cov_88.036364_g38406_i0reverse_frame_1 - 0.03 14.8 0.5 0.3 11.6 0.0 2.4 1 1 1 2 2 2 0 TilS substrate binding domain Ank_2 PF12796.7 NODE_46202_length_420_cov_160.890909_g38395_i0forward_frame_1 - 1e-16 61.2 0.0 2.2e-15 57.0 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_46202_length_420_cov_160.890909_g38395_i0forward_frame_1 - 1.6e-12 47.3 0.0 0.00019 21.7 0.0 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 NODE_46202_length_420_cov_160.890909_g38395_i0forward_frame_1 - 1.8e-12 47.5 0.1 4.3e-07 30.3 0.0 2.8 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_46202_length_420_cov_160.890909_g38395_i0forward_frame_1 - 1.2e-10 40.7 0.1 0.00094 19.5 0.0 3.9 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 NODE_46202_length_420_cov_160.890909_g38395_i0forward_frame_1 - 2.5e-10 40.4 1.2 7.8e-05 22.9 0.0 3.8 1 1 3 4 4 4 3 Ankyrin repeats (many copies) DUF432 PF04254.13 NODE_46201_length_420_cov_168.890909_g38394_i0reverse_frame_1 - 0.13 12.4 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF432) DUF948 PF06103.11 NODE_46199_length_420_cov_185.270130_g38392_i0forward_frame_1 - 0.13 12.6 0.9 0.34 11.2 0.8 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Tctex-1 PF03645.13 NODE_46199_length_420_cov_185.270130_g38392_i0forward_frame_1 - 0.19 12.0 5.2 0.85 9.9 5.2 2.0 1 1 0 1 1 1 0 Tctex-1 family FapA PF03961.13 NODE_46199_length_420_cov_185.270130_g38392_i0forward_frame_1 - 3.2 6.3 12.8 3.5 6.1 12.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Chordopox_A13L PF05961.11 NODE_46193_length_420_cov_254.116883_g38386_i0reverse_frame_1 - 0.16 12.2 0.0 0.27 11.5 0.0 1.4 1 0 0 1 1 1 0 Chordopoxvirus A13L protein DUF432 PF04254.13 NODE_46190_length_420_cov_319.740260_g38383_i0reverse_frame_1 - 0.12 12.5 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF432) DUF1962 PF09227.10 NODE_46183_length_421_cov_1.637306_g38377_i0reverse_frame_2 - 0.011 16.1 0.2 0.011 16.1 0.2 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF1962) Neocarzinostat PF00960.18 NODE_46183_length_421_cov_1.637306_g38377_i0reverse_frame_2 - 0.043 13.8 0.4 0.064 13.2 0.4 1.4 1 0 0 1 1 1 0 Neocarzinostatin family RANK_CRD_2 PF18278.1 NODE_46183_length_421_cov_1.637306_g38377_i0reverse_frame_2 - 0.4 10.9 8.7 0.83 9.9 0.4 2.6 2 1 0 2 2 2 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 Peptidase_S49_N PF08496.10 NODE_46182_length_421_cov_1.764249_g38376_i0forward_frame_3 - 0.048 13.7 5.1 0.061 13.4 5.1 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Autotransporter PF03797.19 NODE_46178_length_421_cov_2.435233_g38372_i0reverse_frame_3 - 4.6e-10 39.6 2.1 5.2e-10 39.4 1.2 1.5 1 1 0 1 1 1 1 Autotransporter beta-domain YadA_anchor PF03895.15 NODE_46178_length_421_cov_2.435233_g38372_i0reverse_frame_3 - 0.23 11.6 1.6 0.36 11.0 0.7 1.7 2 0 0 2 2 2 0 YadA-like membrane anchor domain Cu-oxidase_2 PF07731.14 NODE_46178_length_421_cov_2.435233_g38372_i0forward_frame_3 - 0.0013 18.5 0.6 0.7 9.6 0.1 2.2 1 1 1 2 2 2 2 Multicopper oxidase UPF0565 PF10561.9 NODE_46178_length_421_cov_2.435233_g38372_i0forward_frame_3 - 0.092 11.9 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Latrotoxin_C PF15658.6 NODE_46178_length_421_cov_2.435233_g38372_i0forward_frame_3 - 0.1 12.4 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Latrotoxin C-terminal domain Transformer PF06495.11 NODE_46172_length_421_cov_3.163212_g38366_i0reverse_frame_3 - 7.5 6.6 14.7 10 6.2 14.7 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein DNA_pol_B_3 PF08408.10 NODE_46172_length_421_cov_3.163212_g38366_i0forward_frame_3 - 0.075 13.2 1.2 0.1 12.8 0.7 1.4 1 1 0 1 1 1 0 DNA polymerase family B viral insert GP70 PF17429.2 NODE_46169_length_421_cov_3.505181_g38363_i0reverse_frame_2 - 0.19 11.6 0.0 0.37 10.7 0.0 1.4 1 0 0 1 1 1 0 Gene product 70 Inh PF02974.14 NODE_46169_length_421_cov_3.505181_g38363_i0forward_frame_2 - 0.12 12.5 0.1 3.1 7.9 0.1 2.5 1 1 0 1 1 1 0 Protease inhibitor Inh Cyclin PF08613.11 NODE_46166_length_421_cov_7.891192_g38360_i0reverse_frame_2 - 1.3e-21 77.6 2.0 1.5e-21 77.4 2.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 NODE_46166_length_421_cov_7.891192_g38360_i0reverse_frame_2 - 3.9e-05 23.4 0.5 6.3e-05 22.7 0.4 1.3 1 1 0 1 1 1 1 Cyclin, N-terminal domain NIR_SIR PF01077.22 NODE_46165_length_421_cov_20.753886_g38359_i0forward_frame_3 - 0.18 11.3 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain Spo7_2_N PF15407.6 NODE_46165_length_421_cov_20.753886_g38359_i0forward_frame_2 - 0.25 11.0 2.4 41 3.9 0.0 3.1 2 1 1 3 3 3 0 Sporulation protein family 7 NIR_SIR PF01077.22 NODE_46164_length_421_cov_20.777202_g38358_i0reverse_frame_3 - 0.16 11.5 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain Spo7_2_N PF15407.6 NODE_46164_length_421_cov_20.777202_g38358_i0reverse_frame_2 - 0.28 10.9 2.6 41 3.9 0.0 3.1 2 1 1 3 3 3 0 Sporulation protein family 7 Maf_N PF08383.11 NODE_46164_length_421_cov_20.777202_g38358_i0forward_frame_2 - 0.048 13.4 0.0 0.071 12.9 0.0 1.3 1 0 0 1 1 1 0 Maf N-terminal region DUF3275 PF11679.8 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 0.37 10.7 5.4 0.47 10.4 5.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) DUF4410 PF14366.6 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 0.9 9.4 6.9 0.29 11.0 3.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4410) SAPS PF04499.15 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 1.5 7.5 11.0 1.7 7.4 11.0 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF4407 PF14362.6 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 3.9 6.7 12.4 5 6.4 12.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FUSC PF04632.12 NODE_46158_length_421_cov_66.468912_g36049_i1reverse_frame_3 - 7.1 5.0 6.4 8.7 4.7 6.4 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family IL8 PF00048.20 NODE_46156_length_421_cov_75.474093_g38351_i0forward_frame_3 - 0.12 12.6 5.6 3.2 8.0 0.4 2.7 1 1 1 2 2 2 0 Small cytokines (intecrine/chemokine), interleukin-8 like DUF2830 PF11125.8 NODE_46150_length_421_cov_89.163212_g38345_i0reverse_frame_3 - 0.022 14.7 2.7 0.049 13.6 2.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2830) zf-RING_2 PF13639.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 1.9e-09 37.7 11.6 1.9e-09 37.7 11.6 1.9 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 6.2e-08 32.8 7.7 6.2e-08 32.8 7.7 2.1 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 4.7e-07 29.5 9.9 4.7e-07 29.5 9.9 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 1.8e-06 27.9 2.9 2.7e-06 27.3 2.9 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 2.4e-05 24.1 11.0 2.4e-05 24.1 11.0 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 7.3e-05 22.6 9.3 7.3e-05 22.6 9.3 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.00043 20.0 7.9 0.00043 20.0 7.9 3.3 4 0 0 4 4 4 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.0025 17.8 4.8 0.0025 17.8 4.8 2.9 3 0 0 3 3 3 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.0029 17.5 8.5 0.0029 17.5 8.5 1.8 2 0 0 2 2 2 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.0096 15.8 11.6 0.01 15.6 9.9 1.9 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zinc_ribbon_16 PF17034.5 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.019 15.2 2.6 0.019 15.2 2.6 1.9 1 1 1 2 2 2 0 Zinc-ribbon like family Zn_ribbon_17 PF17120.5 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 0.093 12.4 9.6 0.13 11.9 8.3 1.9 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 NODE_46149_length_421_cov_89.971503_g38344_i0reverse_frame_2 - 2.3 8.4 8.8 35 4.7 9.3 2.6 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Methyltransf_2 PF00891.18 NODE_46145_length_421_cov_105.411917_g38340_i0forward_frame_2 - 0.0097 15.2 0.0 0.012 14.9 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_12 PF08242.12 NODE_46145_length_421_cov_105.411917_g38340_i0forward_frame_2 - 0.01 16.6 0.0 0.016 16.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF2101 PF09874.9 NODE_46140_length_421_cov_204.121762_g38335_i0forward_frame_2 - 0.78 9.4 13.3 0.9 9.2 13.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) RecA_dep_nuc PF16786.5 NODE_46136_length_421_cov_229.676166_g38331_i0forward_frame_3 - 0.88 9.7 3.7 0.49 10.6 1.8 1.5 1 1 0 1 1 1 0 Recombination enhancement, RecA-dependent nuclease Tubulin_C PF03953.17 NODE_46128_length_421_cov_3920.818653_g38323_i0reverse_frame_3 - 0.027 14.7 0.1 0.035 14.3 0.1 1.2 1 0 0 1 1 1 0 Tubulin C-terminal domain Virul_fac_BrkB PF03631.15 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.00059 19.5 2.9 0.00073 19.2 2.9 1.1 1 0 0 1 1 1 1 Virulence factor BrkB DUF3377 PF11857.8 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.02 14.8 0.0 0.02 14.8 0.0 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF3377) LRR19-TM PF15176.6 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.041 13.9 2.0 0.041 13.9 2.0 1.6 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain MFS_1 PF07690.16 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.054 12.4 1.0 0.071 12.0 1.0 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily ATP-synt_8 PF00895.20 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.19 12.2 0.5 0.19 12.2 0.5 2.6 3 0 0 3 3 3 0 ATP synthase protein 8 Frag1 PF10277.9 NODE_46124_length_422_cov_1.121447_g38320_i0forward_frame_3 - 0.21 11.1 13.1 0.3 10.6 7.7 2.1 1 1 1 2 2 2 0 Frag1/DRAM/Sfk1 family DUF3452 PF11934.8 NODE_46121_length_422_cov_1.648579_g38317_i0reverse_frame_2 - 0.074 12.6 2.3 0.13 11.9 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) Methyltransf_20 PF12147.8 NODE_46119_length_422_cov_1.695090_g38315_i0forward_frame_2 - 5.9e-39 134.0 0.0 6.7e-39 133.9 0.0 1.0 1 0 0 1 1 1 1 Putative methyltransferase Arabinose_bd PF12625.7 NODE_46119_length_422_cov_1.695090_g38315_i0forward_frame_2 - 0.044 13.9 0.0 0.06 13.4 0.0 1.2 1 0 0 1 1 1 0 Arabinose-binding domain of AraC transcription regulator, N-term Nucleo_P87 PF07267.11 NODE_46117_length_422_cov_1.754522_g38313_i0reverse_frame_2 - 3.2 6.5 6.9 3.8 6.2 6.9 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 adh_short_C2 PF13561.6 NODE_46116_length_422_cov_1.989664_g38312_i0forward_frame_2 - 2.1e-16 60.2 0.2 2.7e-16 59.9 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 NODE_46116_length_422_cov_1.989664_g38312_i0forward_frame_2 - 1.4e-13 50.8 0.0 1.8e-13 50.4 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 NODE_46116_length_422_cov_1.989664_g38312_i0forward_frame_2 - 0.008 16.1 0.3 0.012 15.5 0.3 1.3 1 1 0 1 1 1 1 KR domain Shikimate_dh_N PF08501.11 NODE_46110_length_422_cov_2.317829_g38306_i0forward_frame_2 - 7.3e-14 51.8 0.0 1.5e-13 50.8 0.0 1.5 2 0 0 2 2 2 1 Shikimate dehydrogenase substrate binding domain Hid1 PF12722.7 NODE_46099_length_422_cov_3.950904_g38295_i0reverse_frame_3 - 0.19 9.8 4.6 0.21 9.7 4.6 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein WES_acyltransf PF03007.16 NODE_46099_length_422_cov_3.950904_g38295_i0forward_frame_3 - 9.3e-07 28.9 0.0 1.2e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 NODE_46099_length_422_cov_3.950904_g38295_i0forward_frame_3 - 0.0016 17.2 0.2 0.0019 17.0 0.2 1.1 1 0 0 1 1 1 1 Condensation domain zf-RING_2 PF13639.6 NODE_46096_length_422_cov_28.524548_g38292_i0forward_frame_3 - 0.012 15.9 1.7 0.033 14.5 1.7 1.7 1 0 0 1 1 1 0 Ring finger domain zf-RING_UBOX PF13445.6 NODE_46096_length_422_cov_28.524548_g38292_i0forward_frame_3 - 0.023 14.7 4.5 0.062 13.3 4.5 1.8 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_46096_length_422_cov_28.524548_g38292_i0forward_frame_3 - 0.071 13.0 2.5 0.15 11.9 2.5 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_46096_length_422_cov_28.524548_g38292_i0forward_frame_3 - 1.4 8.7 11.5 0.39 10.5 7.4 2.2 2 1 0 2 2 2 0 RING-like zinc finger FXa_inhibition PF14670.6 NODE_46094_length_422_cov_58.444444_g38290_i0reverse_frame_3 - 0.4 11.0 2.3 0.61 10.4 2.3 1.2 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site Nitrate_red_del PF02613.15 NODE_46093_length_422_cov_60.098191_g38289_i0forward_frame_2 - 0.12 12.4 0.0 1.1 9.2 0.0 2.1 1 1 1 2 2 2 0 Nitrate reductase delta subunit cIII PF08134.11 NODE_46089_length_422_cov_75.105943_g38285_i0forward_frame_3 - 0.16 11.7 1.0 0.42 10.4 1.0 1.7 1 0 0 1 1 1 0 cIII protein family DUSP PF06337.12 NODE_46082_length_422_cov_86.103359_g38278_i0forward_frame_3 - 0.00055 20.5 0.2 0.00073 20.1 0.2 1.3 1 0 0 1 1 1 1 DUSP domain RuvA_C PF07499.13 NODE_46079_length_422_cov_91.547804_g38275_i0forward_frame_2 - 0.0026 18.1 1.1 0.0049 17.3 1.1 1.4 1 0 0 1 1 1 1 RuvA, C-terminal domain PRCC PF10253.9 NODE_46079_length_422_cov_91.547804_g38275_i0forward_frame_2 - 0.27 12.0 3.8 0.29 11.9 3.8 1.1 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting zf-met PF12874.7 NODE_46073_length_422_cov_101.943152_g38269_i0forward_frame_3 - 0.00036 20.8 0.3 0.001 19.4 0.3 1.8 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 NODE_46073_length_422_cov_101.943152_g38269_i0forward_frame_3 - 0.0043 17.3 0.1 0.009 16.3 0.1 1.6 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 NODE_46073_length_422_cov_101.943152_g38269_i0forward_frame_3 - 0.21 12.1 0.6 0.21 12.1 0.6 2.3 2 1 0 2 2 2 0 Zinc finger, C2H2 type Histone_H2A_C PF16211.5 NODE_46073_length_422_cov_101.943152_g38269_i0forward_frame_3 - 10 6.0 7.0 17 5.2 7.0 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A DUF2171 PF09939.9 NODE_46068_length_422_cov_132.253230_g38264_i0reverse_frame_3 - 0.098 13.0 0.5 0.14 12.5 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2171) Dna2 PF08696.11 NODE_46067_length_422_cov_137.576227_g38263_i0reverse_frame_2 - 0.12 12.1 1.8 0.17 11.7 1.8 1.2 1 0 0 1 1 1 0 DNA replication factor Dna2 zf-AD PF07776.15 NODE_46062_length_422_cov_159.767442_g38258_i0forward_frame_3 - 0.044 14.0 1.3 0.064 13.5 1.3 1.2 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) DUF5417 PF17438.2 NODE_46062_length_422_cov_159.767442_g38258_i0forward_frame_2 - 0.06 13.6 0.1 0.086 13.1 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5417) Nucleo_LEF-12 PF06256.11 NODE_46060_length_422_cov_170.082687_g38256_i0reverse_frame_3 - 0.055 13.2 0.1 0.069 12.9 0.0 1.2 1 1 0 1 1 1 0 Nucleopolyhedrovirus LEF-12 protein SOCS PF12610.8 NODE_46055_length_422_cov_228.105943_g38251_i0forward_frame_3 - 0.12 12.8 3.1 13 6.3 0.6 3.0 2 1 0 2 2 2 0 Suppressor of cytokine signalling Amnionless PF14828.6 NODE_46055_length_422_cov_228.105943_g38251_i0forward_frame_2 - 1.6 7.4 6.4 1.9 7.2 6.4 1.1 1 0 0 1 1 1 0 Amnionless DUF3242 PF11586.8 NODE_46047_length_422_cov_992.981912_g38243_i0reverse_frame_3 - 0.1 12.3 1.1 0.14 11.9 1.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3242) FixS PF03597.15 NODE_46047_length_422_cov_992.981912_g38243_i0reverse_frame_3 - 0.37 10.5 0.0 0.37 10.5 0.0 1.8 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type zf-Dof PF02701.15 NODE_46040_length_423_cov_1.551546_g38238_i0reverse_frame_3 - 0.023 14.9 0.2 0.062 13.5 0.2 1.7 1 0 0 1 1 1 0 Dof domain, zinc finger PhnA_Zn_Ribbon PF08274.12 NODE_46040_length_423_cov_1.551546_g38238_i0reverse_frame_3 - 0.17 11.8 3.1 0.69 9.9 0.1 2.8 2 0 0 2 2 2 0 PhnA Zinc-Ribbon VCX_VCY PF15231.6 NODE_46040_length_423_cov_1.551546_g38238_i0forward_frame_3 - 0.008 16.9 2.8 0.01 16.5 2.8 1.1 1 0 0 1 1 1 1 Variable charge X/Y family PKcGMP_CC PF16808.5 NODE_46039_length_423_cov_1.703608_g38237_i0reverse_frame_2 - 0.00026 20.7 2.5 0.39 10.6 0.2 2.3 2 0 0 2 2 2 2 Coiled-coil N-terminus of cGMP-dependent protein kinase bZIP_1 PF00170.21 NODE_46039_length_423_cov_1.703608_g38237_i0reverse_frame_2 - 0.23 11.6 6.0 0.32 11.1 4.0 2.0 1 1 1 2 2 2 0 bZIP transcription factor HALZ PF02183.18 NODE_46039_length_423_cov_1.703608_g38237_i0reverse_frame_2 - 0.35 11.1 3.0 0.54 10.5 0.6 2.1 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF2280 PF10045.9 NODE_46036_length_423_cov_1.896907_g38234_i0forward_frame_3 - 0.096 13.0 0.1 0.16 12.3 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2280) Cys_Knot_tox PF17486.2 NODE_46033_length_423_cov_2.115979_g38231_i0forward_frame_3 - 0.064 13.5 0.7 0.064 13.5 0.7 1.9 2 1 1 3 3 3 0 Cystine knot toxins ADH_zinc_N PF00107.26 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 2.2e-23 82.6 0.0 2.6e-23 82.4 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 2e-07 30.5 0.2 2e-07 30.5 0.2 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Glu_dehyd_C PF16912.5 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 1.5e-05 24.6 0.2 1.7e-05 24.4 0.2 1.0 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus 3HCDH_N PF02737.18 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.00019 21.3 0.1 0.00022 21.2 0.1 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Methyltransf_25 PF13649.6 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.0045 17.7 0.0 0.0078 16.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UDPG_MGDP_dh_N PF03721.14 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.0065 16.1 0.0 0.0074 15.9 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_binding_2 PF00890.24 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.02 14.0 0.3 0.022 13.9 0.3 1.2 1 0 0 1 1 1 0 FAD binding domain TrkA_N PF02254.18 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.024 14.9 0.1 0.048 13.9 0.0 1.5 1 1 0 1 1 1 0 TrkA-N domain Shikimate_DH PF01488.20 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.035 14.2 0.1 0.048 13.7 0.1 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.042 13.2 0.0 0.054 12.9 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PrmA PF06325.13 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.047 13.1 0.1 0.056 12.8 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Sacchrp_dh_NADP PF03435.18 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.055 13.7 0.1 0.071 13.4 0.1 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox PF00070.27 NODE_46030_length_423_cov_2.703608_g38228_i0forward_frame_3 - 0.074 13.6 0.6 0.19 12.3 0.3 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HTH_26 PF13443.6 NODE_46029_length_423_cov_2.742268_g38227_i0reverse_frame_2 - 0.085 13.3 0.2 0.16 12.4 0.2 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain MscL PF01741.18 NODE_46028_length_423_cov_2.788660_g38226_i0reverse_frame_3 - 0.072 13.4 0.1 0.089 13.1 0.1 1.1 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL SRTM1 PF15872.5 NODE_46028_length_423_cov_2.788660_g38226_i0forward_frame_3 - 0.096 12.8 1.9 0.1 12.8 1.3 1.5 1 1 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 DUF4640 PF15480.6 NODE_46024_length_423_cov_3.139175_g38222_i0reverse_frame_3 - 0.82 9.4 5.3 1.8 8.3 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4640) UTP25 PF06862.12 NODE_46024_length_423_cov_3.139175_g38222_i0forward_frame_3 - 0.0015 17.4 3.1 0.0017 17.2 3.1 1.1 1 0 0 1 1 1 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 NCE101 PF11654.8 NODE_46022_length_423_cov_3.288660_g38220_i0reverse_frame_2 - 0.075 12.8 0.5 0.15 11.8 0.5 1.5 1 0 0 1 1 1 0 Non-classical export protein 1 OAF PF14941.6 NODE_46022_length_423_cov_3.288660_g38220_i0forward_frame_2 - 0.063 12.7 0.1 0.074 12.5 0.1 1.1 1 0 0 1 1 1 0 Transcriptional regulator, Out at first ObR_Ig PF18589.1 NODE_46022_length_423_cov_3.288660_g38220_i0forward_frame_2 - 0.12 12.8 0.1 0.16 12.4 0.1 1.2 1 0 0 1 1 1 0 Obesity receptor immunoglobulin like domain zf-Dof PF02701.15 NODE_46019_length_423_cov_4.250000_g38217_i0reverse_frame_3 - 0.065 13.4 0.1 0.12 12.5 0.1 1.4 1 0 0 1 1 1 0 Dof domain, zinc finger NgoMIV_restric PF09015.10 NODE_46019_length_423_cov_4.250000_g38217_i0reverse_frame_2 - 0.26 10.4 0.0 0.31 10.1 0.0 1.1 1 0 0 1 1 1 0 NgoMIV restriction enzyme SPC25 PF06703.11 NODE_46017_length_423_cov_23.930412_g38215_i0reverse_frame_2 - 0.071 12.9 3.6 0.13 12.0 3.6 1.4 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Svf1_C PF17187.4 NODE_46017_length_423_cov_23.930412_g38215_i0forward_frame_2 - 0.03 14.1 0.9 0.038 13.8 0.9 1.1 1 0 0 1 1 1 0 Svf1-like C-terminal lipocalin-like domain PGA_cap PF09587.10 NODE_46017_length_423_cov_23.930412_g38215_i0forward_frame_2 - 0.049 13.1 0.4 0.054 12.9 0.4 1.1 1 0 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap Neur_chan_memb PF02932.16 NODE_46017_length_423_cov_23.930412_g38215_i0forward_frame_2 - 4.3 7.3 6.2 5.1 7.1 6.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region UvdE PF03851.14 NODE_46012_length_423_cov_57.907216_g38210_i0reverse_frame_3 - 0.023 14.0 0.7 0.026 13.8 0.7 1.1 1 0 0 1 1 1 0 UV-endonuclease UvdE Pox_RNA_pol PF03293.14 NODE_46012_length_423_cov_57.907216_g38210_i0forward_frame_2 - 0.033 13.9 0.2 0.056 13.1 0.2 1.3 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 18 kD subunit Peptidase_C2 PF00648.21 NODE_46011_length_423_cov_63.396907_g38209_i0reverse_frame_2 - 1.6e-21 76.6 0.1 1.9e-21 76.4 0.1 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Hormone_3 PF00159.18 NODE_46011_length_423_cov_63.396907_g38209_i0reverse_frame_2 - 0.13 12.4 0.1 0.26 11.4 0.1 1.5 1 0 0 1 1 1 0 Pancreatic hormone peptide PLN_propep PF16485.5 NODE_46010_length_423_cov_68.881443_g38208_i0reverse_frame_2 - 0.3 10.8 1.4 0.81 9.5 0.9 2.1 1 1 1 2 2 2 0 Protealysin propeptide DUF4229 PF14012.6 NODE_46004_length_423_cov_82.412371_g38202_i0reverse_frame_3 - 1.2 9.3 5.3 0.23 11.6 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) DUF4412 PF14371.6 NODE_46004_length_423_cov_82.412371_g38202_i0forward_frame_3 - 0.088 12.6 1.4 0.12 12.1 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4412) fn3 PF00041.21 NODE_45995_length_423_cov_105.203608_g38193_i0forward_frame_3 - 9.8e-09 35.4 0.1 0.002 18.4 0.0 2.1 2 0 0 2 2 2 2 Fibronectin type III domain SusE PF14292.6 NODE_45995_length_423_cov_105.203608_g38193_i0forward_frame_3 - 0.0094 16.2 0.3 3.1 8.1 0.2 2.3 2 1 0 2 2 2 2 SusE outer membrane protein MBOAT_2 PF13813.6 NODE_45995_length_423_cov_105.203608_g38193_i0forward_frame_2 - 0.85 9.9 7.2 0.23 11.8 1.6 2.2 1 1 1 2 2 2 0 Membrane bound O-acyl transferase family LCE6A PF15858.5 NODE_45985_length_423_cov_154.067010_g38183_i0forward_frame_3 - 0.21 12.4 6.5 0.18 12.6 4.0 2.0 2 0 0 2 2 2 0 Late cornified envelope protein 6A family Oleosin PF01277.17 NODE_45981_length_423_cov_317.994845_g38179_i0reverse_frame_3 - 0.19 11.5 1.8 0.32 10.8 1.2 1.5 1 1 1 2 2 2 0 Oleosin Orbi_VP5 PF00901.17 NODE_45980_length_423_cov_459.121134_g38178_i0reverse_frame_2 - 0.32 9.3 1.9 0.36 9.2 1.9 1.1 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP5 Ig_6 PF18452.1 NODE_45978_length_423_cov_566.146907_g35117_i1reverse_frame_2 - 0.0059 16.1 3.1 0.018 14.6 3.1 1.8 1 0 0 1 1 1 1 Immunoglobulin domain RNA_pol_Rpb2_7 PF04560.20 NODE_45978_length_423_cov_566.146907_g35117_i1reverse_frame_2 - 3.3 8.2 5.9 5 7.6 0.9 2.2 1 1 1 2 2 2 0 RNA polymerase Rpb2, domain 7 Pep_deformylase PF01327.21 ORF99700 - 2.8e-07 30.3 0.1 3.9e-07 29.8 0.1 1.3 1 0 0 1 1 1 1 Polypeptide deformylase TRP PF06011.12 ORF99691 - 0.00038 19.3 6.8 0.00046 19.0 6.8 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Pho88 PF10032.9 ORF99691 - 0.068 12.4 0.1 0.068 12.4 0.1 1.8 2 1 0 2 2 2 0 Phosphate transport (Pho88) TMEMspv1-c74-12 PF11044.8 ORF99691 - 2.6 8.1 13.8 1 9.4 9.0 2.3 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein TctB PF07331.11 ORF99691 - 7.7 6.8 10.3 1.1e+02 3.1 10.4 2.0 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family EmrE PF13536.6 ORF98058 - 0.078 12.6 0.0 0.089 12.4 0.0 1.2 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter FA_desaturase PF00487.24 ORF97445 - 0.043 13.7 0.3 0.06 13.2 0.3 1.3 1 1 0 1 1 1 0 Fatty acid desaturase DUF4781 PF16013.5 ORF97445 - 0.22 10.3 4.8 0.27 10.0 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) Herpes_MCP PF03122.14 ORF95720 - 0.17 9.3 0.2 0.2 9.1 0.2 1.0 1 0 0 1 1 1 0 Herpes virus major capsid protein SH3_3 PF08239.11 ORF95522 - 0.095 13.0 0.1 0.17 12.2 0.1 1.5 1 0 0 1 1 1 0 Bacterial SH3 domain STG PF15809.5 ORF93117 - 0.11 12.6 0.0 8.1 6.4 0.0 2.0 2 0 0 2 2 2 0 Simian taste bud-specific gene product family Zn_dep_PLPC PF00882.18 ORF91439 - 0.085 12.9 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Zinc dependent phospholipase C ATP1G1_PLM_MAT8 PF02038.16 ORF91340 - 1.4 8.4 3.9 0.96 8.9 1.5 2.0 1 1 0 1 1 1 0 ATP1G1/PLM/MAT8 family SPATA25 PF15218.6 ORF90214 - 0.96 9.2 7.1 1.8 8.2 7.1 1.5 1 1 0 1 1 1 0 Spermatogenesis-associated protein 25 RNase_E_G PF10150.9 ORF90006 - 0.2 11.0 5.6 0.23 10.8 5.6 1.2 1 0 0 1 1 1 0 Ribonuclease E/G family Patched PF02460.18 ORF90006 - 0.75 7.8 5.6 0.87 7.6 5.6 1.0 1 0 0 1 1 1 0 Patched family eIF-4B PF06273.11 ORF90006 - 0.81 8.7 4.0 0.64 9.0 2.8 1.2 1 1 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Mer2 PF09074.10 ORF90006 - 2.1 8.1 9.2 2.8 7.7 9.2 1.1 1 0 0 1 1 1 0 Mer2 DUF349 PF03993.12 ORF90006 - 8 6.8 9.8 1.3 9.4 4.6 2.3 2 1 0 2 2 2 0 Domain of Unknown Function (DUF349) Sugar_tr PF00083.24 ORF89905 - 4.2e-21 75.3 0.4 4.5e-21 75.2 0.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF89905 - 1.4e-09 37.3 0.3 1.6e-09 37.2 0.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily SHP PF03579.13 ORF89905 - 0.0074 16.2 0.4 0.013 15.5 0.4 1.4 1 0 0 1 1 1 1 Small hydrophobic protein DUF3169 PF11368.8 ORF89905 - 0.014 14.9 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) Phage_holin_3_2 PF04550.12 ORF89905 - 0.015 15.8 0.2 0.027 15.0 0.2 1.4 1 0 0 1 1 1 0 Phage holin family 2 BioY PF02632.14 ORF89905 - 0.041 13.9 1.9 0.055 13.5 1.9 1.2 1 0 0 1 1 1 0 BioY family DUF4551 PF15087.6 ORF8942 - 0.078 11.8 1.6 0.1 11.4 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks184.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks184.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks184.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks184.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PHD PF00628.29 ORF89154 - 0.0058 16.5 3.6 0.012 15.5 3.6 1.6 1 0 0 1 1 1 1 PHD-finger EDR1 PF14381.6 ORF89154 - 0.043 13.5 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 Ethylene-responsive protein kinase Le-CTR1 YliH PF10799.8 ORF88808 - 1.5e-75 251.1 4.4 1.7e-75 250.9 4.4 1.0 1 0 0 1 1 1 1 Biofilm formation protein (YliH/bssR) Utp12 PF04003.12 ORF87775 - 0.029 14.7 0.6 0.043 14.1 0.6 1.2 1 0 0 1 1 1 0 Dip2/Utp12 Family IMPDH PF00478.25 ORF86779 - 0.001 18.1 0.3 0.0013 17.8 0.3 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain Methyltransf_34 PF11312.8 ORF86779 - 0.085 12.1 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase Guanylate_cyc_2 PF09778.9 ORF8548 - 0.097 12.0 0.1 0.19 11.1 0.1 1.4 1 0 0 1 1 1 0 Guanylylate cyclase HAUS-augmin3 PF14932.6 ORF84350 - 0.012 15.2 1.1 0.016 14.8 1.1 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Sec2p PF06428.11 ORF84350 - 0.028 14.4 0.4 0.045 13.7 0.4 1.3 1 0 0 1 1 1 0 GDP/GTP exchange factor Sec2p SPATA25 PF15218.6 ORF81752 - 0.96 9.2 7.1 1.8 8.2 7.1 1.5 1 1 0 1 1 1 0 Spermatogenesis-associated protein 25 Adhesin_P1 PF03257.13 ORF81576 - 0.15 12.6 1.0 0.34 11.5 0.2 1.9 2 1 0 2 2 2 0 Mycoplasma adhesin P1 DUF229 PF02995.17 ORF79914 - 9e-06 24.6 0.5 9.7e-06 24.5 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF229) MotCF PF09158.10 ORF79914 - 0.0081 16.2 4.7 0.0096 16.0 4.3 1.3 1 1 0 1 1 1 1 Bacteriophage T4 MotA, C-terminal Tli4_C PF18426.1 ORF79914 - 0.15 12.3 0.2 0.17 12.1 0.2 1.1 1 0 0 1 1 1 0 Tle cognate immunity protein 4 C-terminal domain His_kinase PF06580.13 ORF79246 - 0.61 10.5 3.1 0.62 10.4 0.6 1.9 2 0 0 2 2 2 0 Histidine kinase DUF3719 PF12516.8 ORF79072 - 0.009 15.7 0.3 0.017 14.8 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3719) Toxin_16 PF07945.11 ORF79072 - 0.43 10.5 7.6 1.1 9.2 7.6 1.7 1 0 0 1 1 1 0 Janus-atracotoxin Efg1 PF10153.9 ORF72709 - 6.3e-12 45.9 12.7 6.3e-12 45.9 12.7 1.6 2 0 0 2 2 2 1 rRNA-processing protein Efg1 PAS_7 PF12860.7 ORF72709 - 0.072 13.3 0.2 0.14 12.4 0.2 1.4 1 0 0 1 1 1 0 PAS fold DUF4337 PF14235.6 ORF72709 - 2.5 8.2 6.3 1.2 9.2 4.2 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4337) Adhesin_P1 PF03257.13 ORF7253 - 0.15 12.6 1.0 0.34 11.5 0.2 1.9 2 1 0 2 2 2 0 Mycoplasma adhesin P1 zf-AN1 PF01428.16 ORF71620 - 4.4e-10 39.6 6.8 4.4e-10 39.6 6.8 1.9 2 0 0 2 2 2 1 AN1-like Zinc finger zf-C5HC2 PF02928.16 ORF71620 - 0.009 16.4 1.6 0.016 15.6 0.5 2.0 2 0 0 2 2 2 1 C5HC2 zinc finger Transp_Tc5_C PF04236.15 ORF71620 - 0.035 14.5 3.2 0.062 13.7 3.2 1.5 1 0 0 1 1 1 0 Tc5 transposase C-terminal domain zf-C3HC4_5 PF17121.5 ORF71620 - 0.048 13.6 0.9 0.048 13.6 0.9 2.0 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) IBR PF01485.21 ORF71620 - 0.05 13.8 7.6 0.1 12.9 7.6 1.5 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Flocculin PF00624.18 ORF69879 - 0.3 11.4 6.4 0.17 12.1 1.7 2.1 2 0 0 2 2 2 0 Flocculin repeat IGPD PF00475.18 ORF69515 - 1.2e-52 178.1 0.0 1.3e-52 177.9 0.0 1.0 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase Vg_Tdu PF07545.14 ORF69515 - 0.077 12.8 0.1 0.18 11.6 0.1 1.7 1 0 0 1 1 1 0 Vestigial/Tondu family MCM_OB PF17207.3 ORF69162 - 0.066 13.1 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 MCM OB domain UDPG_MGDP_dh PF00984.19 ORF67218 - 0.019 15.2 0.1 0.031 14.5 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, central domain Gate PF07670.14 ORF67059 - 1.5e-10 41.3 2.6 2.6e-10 40.6 0.1 2.2 2 1 0 2 2 2 1 Nucleoside recognition DUF2417 PF10329.9 ORF67059 - 0.034 13.5 2.6 0.044 13.2 2.6 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF2070 PF09843.9 ORF67059 - 0.61 8.3 3.6 0.69 8.1 3.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Aa_trans PF01490.18 ORF66862 - 1.1e-17 63.9 12.1 1.2e-17 63.7 12.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Glt_symporter PF03616.14 ORF66862 - 0.02 13.6 3.5 0.021 13.5 3.5 1.2 1 0 0 1 1 1 0 Sodium/glutamate symporter DUF776 PF05604.11 ORF66481 - 0.0016 18.9 3.0 0.002 18.6 3.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF776) Atg14 PF10186.9 ORF64956 - 0.0002 20.6 10.5 0.00024 20.3 10.5 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Ax_dynein_light PF10211.9 ORF64956 - 0.0087 16.0 10.8 0.0087 16.0 10.8 1.8 1 1 1 2 2 2 1 Axonemal dynein light chain Exonuc_VII_L PF02601.15 ORF64956 - 0.018 14.6 4.9 0.02 14.4 4.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit FapA PF03961.13 ORF64956 - 0.057 12.0 10.9 0.069 11.8 10.9 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A HALZ PF02183.18 ORF64956 - 0.059 13.6 2.8 0.059 13.6 2.8 2.5 1 1 1 2 2 2 0 Homeobox associated leucine zipper APG6_N PF17675.1 ORF64956 - 0.062 13.8 12.2 0.086 13.4 12.2 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF4201 PF13870.6 ORF64956 - 0.065 13.0 16.8 0.85 9.3 2.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) CENP-H PF05837.12 ORF64956 - 0.084 13.3 9.3 0.11 12.9 9.3 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF4407 PF14362.6 ORF64956 - 0.091 12.1 2.2 0.12 11.7 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Sec34 PF04136.15 ORF64956 - 0.11 12.3 10.0 1.3 8.9 1.5 2.1 2 0 0 2 2 2 0 Sec34-like family BLOC1_2 PF10046.9 ORF64956 - 0.12 12.6 13.4 0.32 11.3 1.2 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Macoilin PF09726.9 ORF64956 - 0.13 10.8 8.5 0.18 10.3 8.5 1.3 1 0 0 1 1 1 0 Macoilin family Syntaxin-6_N PF09177.11 ORF64956 - 0.15 12.7 9.7 0.16 12.5 4.3 2.2 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF1515 PF07439.11 ORF64956 - 0.16 12.0 1.9 6.1 6.9 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1515) DUF3450 PF11932.8 ORF64956 - 0.29 10.4 7.3 0.55 9.5 7.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Fib_alpha PF08702.10 ORF64956 - 0.45 10.7 15.5 0.61 10.3 15.5 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Laminin_II PF06009.12 ORF64956 - 0.51 10.4 12.5 0.71 9.9 6.5 2.1 1 1 1 2 2 2 0 Laminin Domain II bZIP_1 PF00170.21 ORF64956 - 0.58 10.3 17.8 0.12 12.5 3.7 3.3 3 0 0 3 3 3 0 bZIP transcription factor DivIC PF04977.15 ORF64956 - 0.95 9.3 19.0 1.5 8.6 2.8 2.9 1 1 2 3 3 3 0 Septum formation initiator BRE1 PF08647.11 ORF64956 - 1.1 9.4 17.7 1.3 9.1 3.7 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase V_ATPase_I PF01496.19 ORF64956 - 1.2 6.9 8.0 1.5 6.7 8.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PCRF PF03462.18 ORF64956 - 1.5 8.7 8.0 0.78 9.6 5.9 1.5 1 1 1 2 2 2 0 PCRF domain ABC2_membrane_3 PF12698.7 ORF64956 - 1.6 7.7 5.3 1.8 7.6 5.3 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein KxDL PF10241.9 ORF64956 - 1.9 8.9 9.8 8.7 6.7 0.5 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein PI_PP_I PF18363.1 ORF64956 - 2.8 8.2 8.9 8.9 6.6 3.1 2.3 1 1 1 2 2 2 0 Phosphoinositide phosphatase insertion domain DUF4140 PF13600.6 ORF64956 - 3.4 8.2 6.7 10 6.6 0.3 2.6 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) ORF6C PF10552.9 ORF64956 - 3.6 7.7 12.8 2.1 8.5 4.3 2.3 1 1 1 2 2 2 0 ORF6C domain DUF16 PF01519.16 ORF64956 - 4.2 7.9 15.1 0.83 10.2 7.5 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 UPF0242 PF06785.11 ORF64956 - 4.6 7.3 16.6 1.8 8.6 2.6 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus FAM76 PF16046.5 ORF64956 - 5.5 6.2 11.0 3 7.1 8.7 1.4 1 1 0 1 1 1 0 FAM76 protein DUF2570 PF10828.8 ORF64956 - 8 6.3 14.5 2 8.3 2.8 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF2570) USP8_interact PF08941.10 ORF64956 - 9.4 6.0 9.8 6.3 6.6 4.2 2.4 1 1 2 3 3 3 0 USP8 interacting DUF4477 PF14780.6 ORF6243 - 0.49 10.0 5.5 0.6 9.7 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) F-box PF00646.33 ORF61259 - 3 7.8 8.1 2.8 7.9 2.1 2.3 2 0 0 2 2 2 0 F-box domain WTX PF09422.10 ORF59730 - 0.0095 15.1 0.1 0.01 14.9 0.1 1.0 1 0 0 1 1 1 1 WTX protein TAP42 PF04177.12 ORF59730 - 0.017 14.3 0.1 0.017 14.3 0.1 1.0 1 0 0 1 1 1 0 TAP42-like family DUF2076 PF09849.9 ORF59730 - 0.056 13.5 1.1 0.077 13.0 1.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF4391 PF14335.6 ORF59730 - 0.064 12.9 1.3 0.08 12.6 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) Spc24 PF08286.11 ORF59730 - 0.62 10.3 4.0 0.89 9.8 4.0 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Lant_dehydr_N PF04738.13 ORF55139 - 0.35 8.9 0.1 0.44 8.6 0.1 1.1 1 0 0 1 1 1 0 Lantibiotic dehydratase, N terminus zf-C2H2 PF00096.26 ORF54855 - 0.036 14.5 0.2 0.1 13.1 0.2 1.8 1 0 0 1 1 1 0 Zinc finger, C2H2 type Ribosomal_S25 PF03297.15 ORF54821 - 2e-28 98.5 2.2 2e-28 98.5 2.2 2.0 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 ORF54821 - 0.0077 15.8 0.5 0.0097 15.5 0.5 1.2 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 ORF54821 - 0.066 12.9 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 ORF54821 - 0.4 11.1 6.7 17 5.8 6.7 2.2 1 1 0 1 1 1 0 Recombinase GRA6 PF05084.13 ORF54427 - 0.22 11.5 0.1 4.2 7.3 0.0 2.0 2 0 0 2 2 2 0 Granule antigen protein (GRA6) SDP_N PF12278.8 ORF52923 - 1.2 9.2 7.8 0.17 12.0 3.4 1.7 2 0 0 2 2 2 0 Sex determination protein N terminal Skp1 PF01466.19 ORF52548 - 0.0084 16.2 0.1 2.6 8.2 0.0 3.0 3 0 0 3 3 3 1 Skp1 family, dimerisation domain DUF3658 PF12395.8 ORF52548 - 0.02 14.8 0.1 0.027 14.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function Myb_DNA-binding PF00249.31 ORF52548 - 0.044 14.0 0.0 0.094 12.9 0.0 1.5 1 0 0 1 1 1 0 Myb-like DNA-binding domain RRT14 PF17075.5 ORF52548 - 0.15 12.1 0.3 0.15 12.1 0.3 1.8 2 0 0 2 2 2 0 Regular of rDNA transcription protein 14 Antimicrobial_2 PF08023.12 ORF50253 - 0.1 13.2 0.1 2.3 8.8 0.1 2.4 2 0 0 2 2 2 0 Frog antimicrobial peptide Eclosion PF04736.12 ORF49979 - 5.1 6.9 12.0 0.11 12.2 4.5 2.1 1 1 1 2 2 2 0 Eclosion hormone DUF1249 PF06853.12 ORF48636 - 2e-41 140.7 0.5 2.3e-41 140.5 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1249) Mannosyl_trans2 PF04188.13 ORF44538 - 0.12 11.7 9.3 0.14 11.5 9.3 1.1 1 0 0 1 1 1 0 Mannosyltransferase (PIG-V) Forkhead PF00250.18 ORF44375 - 0.0068 16.6 0.2 0.011 16.0 0.2 1.4 1 0 0 1 1 1 1 Forkhead domain Staph_haemo PF05480.11 ORF43870 - 0.095 12.5 0.3 1.6 8.6 0.1 2.4 2 0 0 2 2 2 0 Staphylococcus haemolytic protein Fumarate_red_C PF02300.17 ORF43870 - 0.097 12.8 3.2 2.9 8.0 1.0 2.1 2 0 0 2 2 2 0 Fumarate reductase subunit C FumaraseC_C PF10415.9 ORF40731 - 0.021 15.2 0.0 0.043 14.2 0.0 1.6 1 0 0 1 1 1 0 Fumarase C C-terminus SRP-alpha_N PF04086.13 ORF40731 - 0.28 11.1 16.7 0.35 10.8 16.7 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal MMM1 PF10296.9 ORF40731 - 0.82 8.7 7.6 0.93 8.5 7.6 1.2 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Elf1 PF05129.13 ORF40187 - 2.7e-25 88.2 8.3 4.4e-25 87.5 8.3 1.3 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like DpnI PF06044.12 ORF40187 - 0.033 13.8 0.9 0.033 13.8 0.9 1.4 1 1 0 1 1 1 0 Dam-replacing family Lar_restr_allev PF14354.6 ORF40187 - 0.034 14.5 8.1 0.19 12.1 8.1 2.3 1 1 0 1 1 1 0 Restriction alleviation protein Lar DUF1461 PF07314.11 ORF39720 - 0.025 14.5 0.7 0.026 14.4 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) LURAP PF14854.6 ORF39720 - 0.051 13.5 0.2 0.099 12.6 0.2 1.4 1 0 0 1 1 1 0 Leucine rich adaptor protein Tfb2_C PF18307.1 ORF38799 - 0.026 14.9 0.2 0.14 12.6 0.1 2.0 2 0 0 2 2 2 0 Transcription factor Tfb2 (p52) C-terminal domain DUF5443 PF17518.2 ORF3854 - 0.047 12.7 0.1 0.058 12.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5443) EF-hand_14 PF17959.1 ORF37741 - 0.0038 17.5 0.1 0.0049 17.2 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain Ank_4 PF13637.6 ORF35394 - 0.0096 16.5 1.9 0.027 15.0 0.3 2.4 1 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF35394 - 0.15 12.7 0.0 0.23 12.1 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) DUF778 PF05608.12 ORF34052 - 1.3 9.3 3.4 2.4 8.5 3.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF778) ISET-FN3_linker PF16625.5 ORF33657 - 2.8 8.5 7.0 0.18 12.3 0.9 2.1 3 0 0 3 3 3 0 Unstructured linking region I-set and fnIII on Brother of CDO Phytochelatin_C PF09328.10 ORF33023 - 1.1 8.6 3.7 1.4 8.1 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) GSG-1 PF07803.11 ORF30605 - 0.036 14.0 0.0 0.048 13.6 0.0 1.2 1 0 0 1 1 1 0 GSG1-like protein T_Ag_DNA_bind PF02217.16 ORF29714 - 5.3 7.7 7.8 1.3 9.7 1.0 2.9 2 1 2 4 4 4 0 Origin of replication binding protein DUF3886 PF13025.6 ORF28968 - 0.022 14.9 2.3 2.2 8.5 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3886) PLDc_2 PF13091.6 ORF28682 - 4.3e-08 33.1 0.1 5.8e-08 32.7 0.1 1.2 1 0 0 1 1 1 1 PLD-like domain PLDc PF00614.22 ORF28682 - 0.11 12.8 0.2 0.34 11.2 0.2 1.8 1 1 0 1 1 1 0 Phospholipase D Active site motif ABC_tran PF00005.27 ORF28333 - 1.5e-10 41.8 0.1 2e-10 41.3 0.1 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF28333 - 5.8e-05 22.6 0.2 7.2e-05 22.3 0.2 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain FKBP_N_2 PF18023.1 ORF28333 - 0.059 13.5 0.5 0.095 12.8 0.4 1.4 1 1 0 1 1 1 0 BDBT FKBP like N-terminal DUF5507 PF17612.2 ORF28333 - 0.097 12.4 0.1 0.12 12.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5507) Pox_L3_FP4 PF03339.14 ORF25743 - 0.027 13.5 0.0 0.035 13.1 0.0 1.1 1 0 0 1 1 1 0 Poxvirus L3/FP4 protein tRNA-synt_1e PF01406.19 ORF25170 - 0.25 10.7 0.2 0.32 10.3 0.2 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain Ribosomal_L14 PF00238.19 ORF24804 - 1.5e-35 122.0 0.0 1.8e-35 121.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e SKA1 PF07160.12 ORF24576 - 0.018 14.9 6.9 0.027 14.3 6.9 1.3 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 1 COMP PF11598.8 ORF24576 - 0.05 14.1 0.4 0.086 13.3 0.4 1.4 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein Fib_alpha PF08702.10 ORF24576 - 1.5 9.0 8.4 0.8 9.9 1.6 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Haemagg_act PF05860.13 ORF24110 - 0.093 12.6 0.7 0.16 11.9 0.2 1.6 2 0 0 2 2 2 0 haemagglutination activity domain adh_short_C2 PF13561.6 ORF22493 - 3.7e-17 62.7 0.0 7.1e-17 61.7 0.0 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF22493 - 9.5e-16 57.8 0.0 1.2e-15 57.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase DUF5592 PF17332.2 ORF21155 - 0.29 11.7 3.0 0.22 12.1 0.7 1.9 1 1 0 2 2 2 0 Family of unknown function (DUF5592) DUF4596 PF15363.6 ORF20877 - 0.21 11.8 1.6 0.34 11.2 1.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4596) TPR_7 PF13176.6 ORF20132 - 0.00062 19.6 0.7 0.0035 17.3 0.4 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF20132 - 0.00072 19.8 0.3 0.0019 18.4 0.1 1.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF20132 - 0.0082 16.2 3.8 1.4 9.2 0.1 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat SNAP PF14938.6 ORF20132 - 0.016 14.6 1.0 0.019 14.4 0.7 1.3 1 1 0 1 1 1 0 Soluble NSF attachment protein, SNAP TPR_8 PF13181.6 ORF20132 - 0.11 12.8 0.4 0.11 12.8 0.4 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF20132 - 0.34 10.8 0.2 0.34 10.8 0.2 3.1 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2568 PF10823.8 ORF19625 - 0.11 12.7 0.3 0.23 11.8 0.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2568) ENOD40 PF08247.11 ORF18205 - 0.14 12.2 0.3 0.14 12.2 0.3 2.6 3 0 0 3 3 3 0 ENOD40 protein PFEMP PF03011.15 ORF16948 - 0.12 13.1 1.0 0.12 13.1 1.0 1.9 2 0 0 2 2 2 0 PFEMP DBL domain DUF2917 PF11142.8 ORF16647 - 0.021 14.2 0.2 0.048 13.1 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2917) Zn_dep_PLPC PF00882.18 ORF16462 - 0.085 12.9 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Zinc dependent phospholipase C DUF150 PF02576.17 ORF151147 - 7e-29 100.1 0.1 1.5e-28 99.0 0.1 1.6 1 0 0 1 1 1 1 RimP N-terminal domain DUF150_C PF17384.2 ORF151147 - 6.7e-23 80.6 0.2 1e-22 80.0 0.2 1.3 1 0 0 1 1 1 1 RimP C-terminal SH3 domain DUF2457 PF10446.9 ORF150744 - 1.2 8.3 3.4 1.3 8.1 3.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF1461 PF07314.11 ORF149394 - 0.025 14.5 0.7 0.026 14.4 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) LURAP PF14854.6 ORF149394 - 0.051 13.5 0.2 0.099 12.6 0.2 1.4 1 0 0 1 1 1 0 Leucine rich adaptor protein Speriolin_N PF15058.6 ORF148318 - 0.067 13.3 0.9 0.082 13.0 0.3 1.3 1 1 0 1 1 1 0 Speriolin N terminus Pectate_lyase_3 PF12708.7 ORF14801 - 0.057 13.3 0.2 0.089 12.6 0.2 1.3 1 0 0 1 1 1 0 Pectate lyase superfamily protein tRNA_NucTransf2 PF09249.11 ORF147511 - 0.0096 16.2 0.0 0.016 15.5 0.0 1.3 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain TPR_2 PF07719.17 ORF147424 - 4.1e-05 23.4 0.2 8.2e-05 22.4 0.2 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF147424 - 0.002 17.9 0.1 0.0078 16.0 0.1 1.9 1 1 0 1 1 1 1 Tetratricopeptide repeat PTPS_related PF10131.9 ORF147424 - 0.25 9.6 0.1 0.32 9.3 0.1 1.1 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein Gamma-thionin PF00304.20 ORF146514 - 0.02 15.2 0.1 0.02 15.2 0.1 2.5 3 0 0 3 3 3 0 Gamma-thionin family ATP11 PF06644.11 ORF146080 - 0.053 13.3 0.0 0.076 12.8 0.0 1.3 1 0 0 1 1 1 0 ATP11 protein DUF3926 PF13080.6 ORF143969 - 0.1 12.5 0.4 3.9 7.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3926) zf-C3HC4_2 PF13923.6 ORF142575 - 0.13 12.1 2.1 2.9 7.8 0.0 2.9 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Arrestin_C PF02752.22 ORF142170 - 0.066 13.7 0.0 0.1 13.0 0.0 1.3 1 0 0 1 1 1 0 Arrestin (or S-antigen), C-terminal domain Pkinase PF00069.25 ORF141941 - 6.9e-06 25.6 0.1 7.6e-06 25.5 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain CATSPERD PF15020.6 ORF141941 - 0.0082 14.5 0.4 0.009 14.3 0.4 1.0 1 0 0 1 1 1 1 Cation channel sperm-associated protein subunit delta Arm-DNA-bind_1 PF09003.10 ORF141890 - 0.044 13.9 2.6 0.084 13.0 2.4 1.6 1 1 0 1 1 1 0 Bacteriophage lambda integrase, Arm DNA-binding domain DUF1482 PF07358.11 ORF140656 - 5.9e-34 115.8 0.3 9.1e-34 115.2 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1482) DAHP_synth_1 PF00793.20 ORF140055 - 3.6e-14 52.3 0.0 4.7e-14 51.9 0.0 1.2 1 0 0 1 1 1 1 DAHP synthetase I family DUF4477 PF14780.6 ORF139393 - 0.49 10.0 5.5 0.6 9.7 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) Meiotic_rec114 PF03525.14 ORF138316 - 0.0051 15.8 1.8 0.0056 15.7 1.8 1.1 1 0 0 1 1 1 1 Meiotic recombination protein rec114 Hpt PF01627.23 ORF137704 - 5.3e-06 26.6 4.0 1e-05 25.7 4.0 1.6 1 1 0 1 1 1 1 Hpt domain HTH_32 PF13565.6 ORF137252 - 0.11 13.2 4.6 3 8.5 1.2 2.3 2 0 0 2 2 2 0 Homeodomain-like domain DUF4477 PF14780.6 ORF1348 - 0.49 10.0 5.5 0.6 9.7 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) Oxygenase-NA PF09859.9 ORF133630 - 1.1e-06 28.3 0.2 1.8e-06 27.6 0.2 1.3 1 0 0 1 1 1 1 Oxygenase, catalysing oxidative methylation of damaged DNA 2OG-FeII_Oxy_3 PF13640.6 ORF133630 - 0.002 19.0 0.0 0.0051 17.7 0.0 1.6 1 1 1 2 2 2 1 2OG-Fe(II) oxygenase superfamily DZR PF12773.7 ORF133445 - 0.01 15.8 0.6 0.021 14.8 0.6 1.6 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF133445 - 0.015 16.0 0.5 0.028 15.1 0.5 1.5 1 0 0 1 1 1 0 zinc-ribbon family Cript PF10235.9 ORF133445 - 0.047 14.3 1.3 0.062 13.9 0.6 1.6 1 1 1 2 2 2 0 Microtubule-associated protein CRIPT DUF3619 PF12279.8 ORF133445 - 0.059 13.7 0.5 0.1 12.9 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3619) zinc_ribbon_2 PF13240.6 ORF133445 - 0.15 11.8 4.3 0.46 10.3 4.3 1.8 1 0 0 1 1 1 0 zinc-ribbon domain NOB1_Zn_bind PF08772.11 ORF133445 - 0.16 12.1 2.2 0.25 11.5 2.2 1.5 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like zf-C2HC5 PF06221.13 ORF133445 - 1.7 8.7 5.8 0.36 10.9 2.0 1.8 2 1 0 2 2 2 0 Putative zinc finger motif, C2HC5-type CD45 PF12567.8 ORF129990 - 0.087 12.8 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Leukocyte receptor CD45 MYO10_CC PF16735.5 ORF126453 - 0.12 12.5 3.8 2.9 8.1 0.1 2.4 2 1 0 2 2 2 0 Unconventional myosin-X coiled coil domain Trimer_CC PF08954.11 ORF126453 - 0.14 11.8 0.2 0.51 9.9 0.0 1.9 2 0 0 2 2 2 0 Trimerisation motif His_kinase PF06580.13 ORF126165 - 0.61 10.5 3.1 0.62 10.4 0.6 1.9 2 0 0 2 2 2 0 Histidine kinase RF-1 PF00472.20 ORF124768 - 5.7e-26 90.7 0.8 7.5e-26 90.4 0.8 1.0 1 0 0 1 1 1 1 RF-1 domain Peptidase_C1 PF00112.23 ORF124725 - 4.2e-29 102.2 0.0 4.7e-29 102.0 0.0 1.0 1 0 0 1 1 1 1 Papain family cysteine protease EOS1 PF12326.8 ORF124136 - 0.27 11.2 6.6 0.11 12.4 4.3 1.5 1 1 1 2 2 2 0 N-glycosylation protein Fam20C PF06702.12 ORF123646 - 0.0079 16.0 0.1 0.0098 15.7 0.1 1.1 1 0 0 1 1 1 1 Golgi casein kinase, C-terminal, Fam20 DUF1772 PF08592.11 ORF123300 - 0.13 12.5 3.0 0.2 12.0 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) PFEMP PF03011.15 ORF122733 - 0.12 13.1 1.0 0.12 13.1 1.0 1.9 2 0 0 2 2 2 0 PFEMP DBL domain bZIP_1 PF00170.21 ORF122546 - 2e-07 31.0 7.6 2e-07 31.0 7.6 2.6 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF122546 - 2.5e-06 27.5 4.0 2.5e-06 27.5 4.0 3.2 3 0 0 3 3 3 1 Basic region leucine zipper MRP-S26 PF14943.6 ORF122546 - 0.59 10.0 16.1 1.1 9.2 16.1 1.5 1 1 0 1 1 1 0 Mitochondrial ribosome subunit S26 TFIIE_beta PF02186.15 ORF122057 - 0.13 12.5 0.1 0.47 10.8 0.0 1.9 2 0 0 2 2 2 0 TFIIE beta subunit core domain EOS1 PF12326.8 ORF119770 - 0.27 11.2 6.6 0.11 12.4 4.3 1.5 1 1 1 2 2 2 0 N-glycosylation protein DUF2834 PF11196.8 ORF117555 - 0.0082 16.5 0.1 0.011 16.0 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2834) KLRAQ PF10205.9 ORF117043 - 0.058 13.6 1.3 0.058 13.6 1.3 3.0 2 1 1 3 3 3 0 Predicted coiled-coil domain-containing protein Herpes_BLRF2 PF05812.12 ORF117043 - 0.54 10.4 6.9 0.57 10.3 1.7 2.5 2 1 0 2 2 2 0 Herpesvirus BLRF2 protein Peptidase_U32 PF01136.19 ORF116331 - 0.096 11.8 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase family U32 Phytochelatin_C PF09328.10 ORF111490 - 1.1 8.6 3.7 1.4 8.1 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) LPD5 PF18799.1 ORF11113 - 0.33 11.3 4.7 1.3 9.4 0.8 2.3 2 0 0 2 2 2 0 Large polyvalent protein-associated domain 5 Fungal_trans PF04082.18 ORF111025 - 0.059 12.4 0.8 0.069 12.2 0.8 1.2 1 0 0 1 1 1 0 Fungal specific transcription factor domain MIF4G PF02854.19 ORF109781 - 0.15 11.7 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 MIF4G domain Sybindin PF04099.12 ORF107599 - 9.1e-23 80.8 0.7 1e-22 80.6 0.7 1.0 1 0 0 1 1 1 1 Sybindin-like family Sedlin_N PF04628.13 ORF107599 - 0.032 14.3 0.1 0.037 14.2 0.1 1.2 1 0 0 1 1 1 0 Sedlin, N-terminal conserved region His_kinase PF06580.13 ORF107255 - 0.61 10.5 3.1 0.62 10.4 0.6 1.9 2 0 0 2 2 2 0 Histidine kinase Phytochelatin_C PF09328.10 ORF105553 - 1.1 8.6 3.7 1.4 8.1 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) CAP59_mtransfer PF11735.8 ORF105240 - 0.45 10.2 1.8 0.57 9.8 1.8 1.1 1 0 0 1 1 1 0 Cryptococcal mannosyltransferase 1 ERGIC_N PF13850.6 ORF103658 - 0.011 16.0 0.0 0.021 15.2 0.0 1.5 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF885 PF05960.11 ORF101955 - 0.012 15.3 2.6 0.014 15.0 2.6 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) ApoLp-III PF07464.11 ORF101955 - 0.013 15.6 1.3 0.016 15.3 1.3 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Apolipoprotein PF01442.18 ORF101955 - 0.073 12.9 4.8 0.1 12.5 4.8 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Cytochrom_B562 PF07361.11 ORF101955 - 0.13 13.0 2.0 0.16 12.6 2.0 1.2 1 0 0 1 1 1 0 Cytochrome b562 DSPc PF00782.20 ORF100007 - 4.5e-11 42.7 0.0 6.3e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF100007 - 1e-05 25.3 0.0 1.3e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 ORF100007 - 0.0042 17.1 0.1 0.0056 16.7 0.1 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family PTPlike_phytase PF14566.6 ORF100007 - 0.025 14.7 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate Voltage_CLC PF00654.20 NODE_46636_length_415_cov_1.768421_g38819_i0forward_frame_1 - 2.6e-25 89.4 0.5 2.8e-25 89.3 0.5 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel DuoxA PF10204.9 NODE_46636_length_415_cov_1.768421_g38819_i0forward_frame_1 - 0.0014 17.7 1.1 0.0017 17.4 1.1 1.2 1 0 0 1 1 1 1 Dual oxidase maturation factor S_2TMBeta PF18153.1 NODE_46633_length_415_cov_2.123684_g38816_i0forward_frame_1 - 0.2 11.4 9.6 0.11 12.3 7.7 1.4 1 1 1 2 2 2 0 SMODS-associating 2TM, beta-strand rich effector domain VSG_B PF13206.6 NODE_46609_length_415_cov_60.021053_g38792_i0forward_frame_1 - 0.047 13.0 8.9 0.06 12.6 8.9 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain Presenilin PF01080.17 NODE_46609_length_415_cov_60.021053_g38792_i0forward_frame_1 - 0.055 12.2 1.4 0.062 12.1 1.4 1.1 1 0 0 1 1 1 0 Presenilin YL1 PF05764.13 NODE_46609_length_415_cov_60.021053_g38792_i0forward_frame_1 - 1.1 9.3 16.3 1.3 9.1 16.3 1.0 1 0 0 1 1 1 0 YL1 nuclear protein DUF963 PF06131.11 NODE_46604_length_415_cov_69.605263_g38787_i0forward_frame_1 - 0.0096 15.3 1.2 0.02 14.3 1.2 1.5 1 0 0 1 1 1 1 Schizosaccharomyces pombe repeat of unknown function (DUF963) DUF755 PF05501.11 NODE_46602_length_415_cov_76.707895_g38785_i0forward_frame_1 - 9.9 6.5 20.9 4.1 7.7 12.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF755) PDGF_N PF04692.13 NODE_46599_length_415_cov_83.939474_g38782_i0forward_frame_1 - 0.26 12.1 3.8 1.9 9.4 0.0 2.1 2 0 0 2 2 2 0 Platelet-derived growth factor, N terminal region Rrf2 PF02082.20 NODE_46589_length_415_cov_98.142105_g38772_i0reverse_frame_1 - 0.2 12.0 0.0 0.34 11.3 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Dmrt1 PF12374.8 NODE_46589_length_415_cov_98.142105_g38772_i0forward_frame_1 - 0.028 14.8 1.2 6 7.4 0.1 2.2 1 1 1 2 2 2 0 Double-sex mab3 related transcription factor 1 CRAL_TRIO_2 PF13716.6 NODE_46586_length_415_cov_104.489474_g38769_i0reverse_frame_1 - 0.056 13.6 0.0 0.075 13.2 0.0 1.3 1 1 0 1 1 1 0 Divergent CRAL/TRIO domain PWWP PF00855.17 NODE_46576_length_415_cov_148.442105_g38760_i0forward_frame_1 - 0.0034 17.8 0.2 0.0059 17.0 0.2 1.4 1 0 0 1 1 1 1 PWWP domain HET-S PF17108.5 NODE_46576_length_415_cov_148.442105_g38760_i0forward_frame_1 - 9.5 6.1 7.2 1 9.2 1.2 2.3 2 0 0 2 2 2 0 N-terminal small S protein of HET, non-prionic Toxin_35 PF10530.9 NODE_46575_length_415_cov_153.144737_g38759_i0reverse_frame_1 - 9.3 6.3 16.3 3 7.9 0.3 3.3 3 0 0 3 3 3 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold MFS_1 PF07690.16 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_1 - 2e-10 40.1 4.9 2.4e-10 39.9 4.9 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_1 - 1.4e-05 24.2 4.6 1.6e-05 24.0 4.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Popeye PF04831.13 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_1 - 0.12 12.5 1.5 0.15 12.3 1.5 1.2 1 0 0 1 1 1 0 Popeye protein conserved region DUF2070 PF09843.9 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_1 - 0.16 10.2 8.8 0.18 10.0 8.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) AF-4 PF05110.13 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 0.00021 19.6 22.9 0.00023 19.5 22.9 1.1 1 0 0 1 1 1 1 AF-4 proto-oncoprotein FAM76 PF16046.5 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 0.064 12.6 18.7 0.078 12.3 18.7 1.0 1 0 0 1 1 1 0 FAM76 protein DUF4692 PF15763.5 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 0.59 10.6 10.7 0.78 10.2 10.7 1.2 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) Menin PF05053.13 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 2.1 6.6 12.3 2.4 6.4 12.3 1.0 1 0 0 1 1 1 0 Menin TraG-D_C PF12696.7 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 4.6 7.2 12.6 9 6.3 12.6 1.5 1 1 0 1 1 1 0 TraM recognition site of TraD and TraG Gti1_Pac2 PF09729.9 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 5.5 7.0 16.1 7.8 6.5 16.1 1.3 1 1 0 1 1 1 0 Gti1/Pac2 family DUF1180 PF06679.12 NODE_46560_length_416_cov_1.784777_g38745_i0reverse_frame_1 - 9.6 6.6 7.8 13 6.2 7.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Mito_carr PF00153.27 NODE_46554_length_416_cov_2.425197_g38739_i0reverse_frame_1 - 0.037 14.0 0.0 0.05 13.5 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial carrier protein FUSC-like PF12805.7 NODE_46546_length_416_cov_2.787402_g38731_i0forward_frame_1 - 0.18 10.8 0.1 0.22 10.6 0.1 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS SmpB PF01668.18 NODE_46543_length_416_cov_2.871391_g38728_i0reverse_frame_1 - 1.7e-22 79.9 0.0 2.2e-22 79.5 0.0 1.2 1 0 0 1 1 1 1 SmpB protein Pex24p PF06398.11 NODE_46535_length_416_cov_3.517060_g38720_i0reverse_frame_1 - 2.3 7.1 8.3 2.3 7.1 8.3 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Nup188_C PF18378.1 NODE_46535_length_416_cov_3.517060_g38720_i0forward_frame_1 - 0.013 14.3 1.1 0.016 14.0 1.1 1.1 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain PI3K_P85_iSH2 PF16454.5 NODE_46528_length_416_cov_50.816273_g38713_i0reverse_frame_1 - 0.11 12.2 0.8 0.14 11.7 0.8 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain UBM PF14377.6 NODE_46527_length_416_cov_54.889764_g38712_i0forward_frame_1 - 1.6e-12 46.4 3.9 1.9e-06 27.1 0.6 2.6 2 0 0 2 2 2 2 Ubiquitin binding region YwiC PF14256.6 NODE_46525_length_416_cov_58.097113_g38710_i0reverse_frame_1 - 0.079 13.3 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 YwiC-like protein MFS_1 PF07690.16 NODE_46525_length_416_cov_58.097113_g38710_i0forward_frame_1 - 1e-08 34.5 0.4 1.2e-08 34.4 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Cys_Knot_tox PF17486.2 NODE_46517_length_416_cov_81.183727_g38702_i0reverse_frame_1 - 0.18 12.0 2.7 7.9 6.8 0.1 2.2 2 0 0 2 2 2 0 Cystine knot toxins Pro-MCH PF05824.12 NODE_46515_length_416_cov_103.650919_g38700_i0reverse_frame_1 - 0.13 12.2 0.2 0.3 11.1 0.2 1.5 1 0 0 1 1 1 0 Pro-melanin-concentrating hormone (Pro-MCH) Chitin_bind_4 PF00379.23 NODE_46503_length_416_cov_191.530184_g38688_i0reverse_frame_1 - 0.13 12.8 0.0 0.22 12.1 0.0 1.3 1 0 0 1 1 1 0 Insect cuticle protein Arf PF00025.21 NODE_46500_length_416_cov_262.490814_g38685_i0reverse_frame_1 - 6e-29 100.7 0.0 7.4e-29 100.4 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Ribo_biogen_C PF04034.13 NODE_46486_length_417_cov_1.856021_g38672_i0reverse_frame_1 - 0.04 13.6 0.0 0.067 12.9 0.0 1.4 1 0 0 1 1 1 0 Ribosome biogenesis protein, C-terminal Peptidase_S13 PF02113.15 NODE_46485_length_417_cov_1.905759_g38671_i0reverse_frame_1 - 3.3e-51 174.4 0.0 3.6e-51 174.3 0.0 1.0 1 0 0 1 1 1 1 D-Ala-D-Ala carboxypeptidase 3 (S13) family CusF_Ec PF11604.8 NODE_46485_length_417_cov_1.905759_g38671_i0reverse_frame_1 - 0.14 12.1 0.0 0.29 11.1 0.0 1.6 1 0 0 1 1 1 0 Copper binding periplasmic protein CusF Nitrate_red_del PF02613.15 NODE_46485_length_417_cov_1.905759_g38671_i0forward_frame_1 - 0.24 11.4 0.0 0.35 10.9 0.0 1.2 1 0 0 1 1 1 0 Nitrate reductase delta subunit DUF3600 PF12207.8 NODE_46480_length_417_cov_2.520942_g38666_i0forward_frame_1 - 0.0033 17.4 0.3 0.74 9.7 0.1 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3600) CdvA PF18822.1 NODE_46480_length_417_cov_2.520942_g38666_i0forward_frame_1 - 0.013 15.4 4.1 0.16 11.8 0.5 2.6 2 1 1 3 3 3 0 CdvA-like coiled-coil domain Lamprin PF06403.11 NODE_46475_length_417_cov_3.772251_g38661_i0forward_frame_1 - 8.4 6.3 12.1 5.3 7.0 1.7 2.3 1 1 1 2 2 2 0 Lamprin RCC1_2 PF13540.6 NODE_46470_length_417_cov_30.528796_g8997_i2forward_frame_1 - 0.00086 19.0 0.1 1.4 8.8 0.0 2.6 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PIR PF00399.19 NODE_46470_length_417_cov_30.528796_g8997_i2forward_frame_1 - 1.1 8.9 6.1 4.8 6.9 0.7 2.4 2 0 0 2 2 2 0 Yeast PIR protein repeat Hep_core_N PF08290.11 NODE_46466_length_417_cov_46.636126_g38653_i0reverse_frame_1 - 8.7 6.5 9.6 1.4 9.0 0.7 3.1 3 0 0 3 3 3 0 Hepatitis core protein, putative zinc finger COX2 PF00116.20 NODE_46455_length_417_cov_81.094241_g38642_i0forward_frame_1 - 0.15 12.0 0.1 0.21 11.5 0.1 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain YjbT PF17089.5 NODE_46453_length_417_cov_82.285340_g38640_i0reverse_frame_1 - 0.1 12.6 0.0 2.4 8.2 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family HCNGP PF07818.13 NODE_46439_length_417_cov_124.175393_g38627_i0reverse_frame_1 - 0.015 15.9 0.3 0.027 15.1 0.3 1.6 1 1 0 1 1 1 0 HCNGP-like protein Novirhabdo_Nv PF05554.11 NODE_46423_length_417_cov_323.842932_g37978_i1reverse_frame_1 - 0.086 12.6 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Viral hemorrhagic septicemia virus non-virion protein Bac_DNA_binding PF00216.21 NODE_46419_length_417_cov_846.219895_g38608_i0reverse_frame_1 - 4.4e-11 42.8 1.3 6e-11 42.4 1.3 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein hnRNP_Q_AcD PF18360.1 NODE_46419_length_417_cov_846.219895_g38608_i0reverse_frame_1 - 0.12 12.4 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain Kelch_6 PF13964.6 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 3.6e-06 27.1 0.0 5.5e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 0.00026 20.5 0.1 0.00036 20.0 0.1 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 0.033 14.5 0.0 0.057 13.7 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 0.12 12.4 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_4 PF13418.6 NODE_46407_length_418_cov_2.180157_g38597_i0forward_frame_3 - 0.14 12.2 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain HPPK PF01288.20 NODE_46404_length_418_cov_2.472585_g38594_i0reverse_frame_3 - 3.6e-31 108.0 0.0 4.1e-31 107.8 0.0 1.0 1 0 0 1 1 1 1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Toxin_8 PF07365.12 NODE_46404_length_418_cov_2.472585_g38594_i0forward_frame_2 - 0.012 15.7 0.9 0.027 14.7 0.9 1.6 1 0 0 1 1 1 0 Alpha conotoxin precursor Insulin PF00049.18 NODE_46404_length_418_cov_2.472585_g38594_i0forward_frame_2 - 0.027 15.4 1.1 0.038 15.0 0.3 1.7 2 0 0 2 2 2 0 Insulin/IGF/Relaxin family DUF2976 PF11190.8 NODE_46403_length_418_cov_2.600522_g38593_i0reverse_frame_2 - 0.16 11.8 0.1 0.25 11.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) ZapC PF07126.12 NODE_46403_length_418_cov_2.600522_g38593_i0forward_frame_3 - 8.5e-06 25.4 0.1 1.4e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 Cell-division protein ZapC MFS_1 PF07690.16 NODE_46402_length_418_cov_2.603133_g38592_i0forward_frame_3 - 0.0014 17.7 14.5 0.0052 15.7 14.5 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily Acetone_carb_G PF08882.11 NODE_46401_length_418_cov_2.634465_g38591_i0forward_frame_2 - 2.7 8.2 6.0 1 9.5 0.8 2.4 1 1 1 2 2 2 0 Acetone carboxylase gamma subunit Vps36-NZF-N PF16988.5 NODE_46379_length_418_cov_50.605744_g38570_i0reverse_frame_3 - 7.2 6.1 10.2 1.8 8.0 0.1 2.8 3 0 0 3 3 3 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks185.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks185.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks185.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks185.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Alpha-amyl_C PF09071.10 NODE_46364_length_418_cov_91.271540_g38555_i0reverse_frame_2 - 0.051 13.4 1.1 0.15 12.0 0.5 2.0 1 1 1 2 2 2 0 Alpha-amylase, C terminal ECSCR PF15820.5 NODE_46364_length_418_cov_91.271540_g38555_i0forward_frame_3 - 1.2 9.1 3.0 1.8 8.5 3.0 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator GST_C_3 PF14497.6 NODE_46362_length_418_cov_91.459530_g38553_i0reverse_frame_3 - 4.7e-05 23.5 0.0 7.1e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain SET PF00856.28 NODE_46360_length_418_cov_95.898172_g38551_i0reverse_frame_2 - 4.6e-07 30.4 0.0 6.5e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 SET domain DUF4636 PF15468.6 NODE_46360_length_418_cov_95.898172_g38551_i0forward_frame_2 - 0.045 13.5 0.2 0.058 13.1 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) HIRA_B PF09453.10 NODE_46354_length_418_cov_111.080940_g38545_i0reverse_frame_2 - 0.7 9.8 3.5 7.5 6.5 0.3 2.4 2 0 0 2 2 2 0 HIRA B motif Hydrolase_4 PF12146.8 NODE_46351_length_418_cov_139.208877_g38542_i0reverse_frame_2 - 0.0011 18.3 0.0 0.0014 17.9 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 FSH1 PF03959.13 NODE_46351_length_418_cov_139.208877_g38542_i0reverse_frame_2 - 0.0088 15.7 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_1 PF00561.20 NODE_46351_length_418_cov_139.208877_g38542_i0reverse_frame_2 - 0.1 12.2 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold Membralin PF09746.9 NODE_46348_length_418_cov_145.524804_g38539_i0reverse_frame_3 - 0.013 14.6 0.3 0.017 14.2 0.3 1.1 1 0 0 1 1 1 0 Tumour-associated protein Tail_P2_I PF09684.10 NODE_46346_length_418_cov_156.214099_g38537_i0forward_frame_2 - 0.13 12.2 2.0 0.17 11.8 1.5 1.6 1 1 0 1 1 1 0 Phage tail protein (Tail_P2_I) PWI PF01480.17 NODE_46337_length_418_cov_432.449086_g38529_i0reverse_frame_3 - 6.6e-10 39.2 0.1 1.2e-09 38.4 0.1 1.3 1 0 0 1 1 1 1 PWI domain Pectate_lyase_2 PF06917.12 NODE_46337_length_418_cov_432.449086_g38529_i0reverse_frame_3 - 0.12 10.9 0.0 0.13 10.8 0.0 1.1 1 0 0 1 1 1 0 Periplasmic pectate lyase Ureide_permease PF07168.11 NODE_46335_length_418_cov_671.668407_g38527_i0reverse_frame_2 - 0.75 8.5 3.5 0.87 8.3 3.5 1.1 1 0 0 1 1 1 0 Ureide permease EVC2_like PF12297.8 NODE_46335_length_418_cov_671.668407_g38527_i0forward_frame_3 - 1.3 7.6 3.7 1.4 7.5 3.7 1.2 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Halogen_Hydrol PF10112.9 NODE_46335_length_418_cov_671.668407_g38527_i0forward_frame_3 - 6.8 6.7 6.2 7.9 6.5 6.2 1.2 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF2207 PF09972.9 NODE_46335_length_418_cov_671.668407_g38527_i0forward_frame_3 - 8.1 5.1 9.2 10 4.8 9.2 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phospho_p8 PF10195.9 NODE_46332_length_419_cov_1.567708_g38524_i0forward_frame_3 - 0.057 13.9 0.5 0.093 13.2 0.5 1.3 1 0 0 1 1 1 0 DNA-binding nuclear phosphoprotein p8 Mitofilin PF09731.9 NODE_46330_length_419_cov_1.817708_g38522_i0reverse_frame_2 - 0.11 11.4 5.0 0.13 11.1 5.0 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein IL31 PF15209.6 NODE_46330_length_419_cov_1.817708_g38522_i0reverse_frame_2 - 0.15 11.8 5.4 0.23 11.2 5.3 1.4 1 1 0 1 1 1 0 Interleukin 31 Peptidase_A2E PF12382.8 NODE_46330_length_419_cov_1.817708_g38522_i0forward_frame_3 - 0.12 12.3 0.7 0.19 11.8 0.7 1.3 1 0 0 1 1 1 0 Retrotransposon peptidase Flu_M2 PF00599.17 NODE_46330_length_419_cov_1.817708_g38522_i0forward_frame_2 - 4.9 7.3 9.1 5.4 7.2 0.5 2.4 1 1 2 3 3 3 0 Influenza Matrix protein (M2) DUF4049 PF13258.6 NODE_46329_length_419_cov_1.903646_g38521_i0reverse_frame_3 - 2e-79 267.0 2.2 2.4e-79 266.8 2.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4049) Ndufs5 PF10200.9 NODE_46321_length_419_cov_2.437500_g38513_i0forward_frame_2 - 0.028 14.7 1.3 0.048 13.9 1.1 1.6 1 1 1 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa Sugar_tr PF00083.24 NODE_46320_length_419_cov_2.531250_g38512_i0forward_frame_3 - 0.00018 20.5 0.4 0.00019 20.5 0.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_46320_length_419_cov_2.531250_g38512_i0forward_frame_3 - 0.00096 18.2 1.6 0.0011 18.0 1.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily TctA PF01970.16 NODE_46320_length_419_cov_2.531250_g38512_i0forward_frame_3 - 0.018 13.8 4.1 0.023 13.4 4.1 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family DUF2616 PF11077.8 NODE_46319_length_419_cov_2.583333_g38511_i0forward_frame_2 - 0.025 14.3 1.3 0.03 14.0 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2616) pXO2-34 PF17362.2 NODE_46318_length_419_cov_2.731771_g38510_i0reverse_frame_3 - 0.074 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function Molybdopterin PF00384.22 NODE_46318_length_419_cov_2.731771_g38510_i0reverse_frame_2 - 0.013 14.4 0.0 0.016 14.2 0.0 1.1 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Herpes_LP PF03363.13 NODE_46316_length_419_cov_3.127604_g38508_i0reverse_frame_3 - 0.059 13.2 4.9 0.046 13.5 3.1 1.7 1 1 0 1 1 1 0 Herpesvirus leader protein DeoC PF01791.9 NODE_46314_length_419_cov_3.572917_g38506_i0forward_frame_2 - 9.9e-17 61.3 0.1 1.1e-16 61.1 0.1 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase Pet191_N PF10203.9 NODE_46310_length_419_cov_4.739583_g38502_i0reverse_frame_2 - 0.12 12.7 7.4 1.8 8.9 5.2 2.7 2 1 1 3 3 3 0 Cytochrome c oxidase assembly protein PET191 NPM1-C PF16276.5 NODE_46310_length_419_cov_4.739583_g38502_i0reverse_frame_2 - 0.46 10.5 5.9 1.2 9.2 0.8 2.9 2 1 0 3 3 3 0 Nucleophosmin C-terminal domain CvfB_WH PF17783.1 NODE_46310_length_419_cov_4.739583_g38502_i0forward_frame_3 - 0.039 13.8 1.7 0.075 12.9 1.7 1.5 1 0 0 1 1 1 0 CvfB-like winged helix domain preSET_CXC PF18264.1 NODE_46305_length_419_cov_31.242188_g38497_i0reverse_frame_3 - 0.2 12.1 2.9 0.44 11.1 2.9 1.6 1 1 0 1 1 1 0 CXC domain zf-C2H2_11 PF16622.5 NODE_46300_length_419_cov_64.468750_g38492_i0reverse_frame_2 - 0.048 13.4 1.3 0.083 12.7 1.3 1.4 1 0 0 1 1 1 0 zinc-finger C2H2-type Epsilon_antitox PF08998.11 NODE_46294_length_419_cov_74.817708_g38486_i0reverse_frame_2 - 0.012 15.9 0.7 0.019 15.2 0.7 1.3 1 0 0 1 1 1 0 Bacterial epsilon antitoxin HTH_Tnp_Tc5 PF03221.16 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.0016 18.4 0.0 0.0036 17.3 0.0 1.6 1 1 0 1 1 1 1 Tc5 transposase DNA-binding domain KAR PF15222.6 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.0032 17.7 0.0 0.27 11.5 0.0 2.1 1 1 1 2 2 2 1 Kidney androgen-regulated Syntaxin_2 PF14523.6 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.03 14.7 0.2 1.5 9.2 0.0 2.2 2 0 0 2 2 2 0 Syntaxin-like protein CotJB PF12652.7 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.16 12.2 0.2 0.45 10.8 0.2 1.7 1 1 1 2 2 2 0 CotJB protein Spore_YhaL PF14147.6 NODE_46288_length_419_cov_83.325521_g38480_i0reverse_frame_2 - 0.23 11.2 2.7 0.24 11.1 0.3 2.0 2 0 0 2 2 2 0 Sporulation protein YhaL BLOC1S3 PF15753.5 NODE_46284_length_419_cov_92.231771_g38476_i0forward_frame_2 - 0.041 14.0 1.7 0.053 13.7 1.7 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 Peptidase_S10 PF00450.22 NODE_46282_length_419_cov_100.078125_g38474_i0reverse_frame_2 - 2.7e-11 43.5 0.0 3.4e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase Lactamase_B_3 PF13483.6 NODE_46282_length_419_cov_100.078125_g38474_i0reverse_frame_2 - 0.00059 19.8 0.0 0.00073 19.5 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Arena_glycoprot PF00798.18 NODE_46270_length_419_cov_285.705729_g38462_i0reverse_frame_2 - 0.032 12.9 3.2 0.027 13.1 3.2 1.1 1 0 0 1 1 1 0 Arenavirus glycoprotein CytochromB561_N PF09786.9 NODE_46270_length_419_cov_285.705729_g38462_i0reverse_frame_2 - 0.11 11.4 3.1 0.13 11.3 3.1 1.1 1 0 0 1 1 1 0 Cytochrome B561, N terminal RasGEF PF00617.19 NODE_46270_length_419_cov_285.705729_g38462_i0forward_frame_2 - 0.019 15.2 0.8 0.24 11.6 0.3 2.0 1 1 1 2 2 2 0 RasGEF domain HAD_2 PF13419.6 NODE_46268_length_419_cov_309.697917_g38460_i0reverse_frame_2 - 0.063 13.4 0.0 0.095 12.8 0.0 1.3 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Thrombin_light PF09396.10 NODE_46262_length_420_cov_1.651948_g38454_i0reverse_frame_2 - 0.045 13.5 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 Thrombin light chain SSL_OB PF09199.10 NODE_46255_length_420_cov_2.231169_g38447_i0reverse_frame_2 - 0.15 12.4 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 Staphylococcal superantigen-like OB-fold domain S-antigen PF05756.11 NODE_46252_length_420_cov_2.392208_g38444_i0reverse_frame_3 - 3.1 8.2 7.7 0.26 11.7 2.0 2.0 2 0 0 2 2 2 0 S-antigen protein DUF3678 PF12435.8 NODE_46250_length_420_cov_2.441558_g38442_i0forward_frame_3 - 5.6 6.4 10.4 2.3 7.7 7.5 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) MTA_R1 PF17226.2 NODE_46250_length_420_cov_2.441558_g38442_i0forward_frame_2 - 0.077 13.1 1.4 0.16 12.1 1.4 1.5 1 0 0 1 1 1 0 MTA R1 domain MSA-2c PF12238.8 NODE_46235_length_420_cov_6.961039_g17334_i1reverse_frame_2 - 7.5 6.5 6.3 9.9 6.1 6.3 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Phytochelatin_C PF09328.10 NODE_46235_length_420_cov_6.961039_g17334_i1forward_frame_2 - 0.076 12.3 0.5 0.091 12.1 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) TP2 PF01254.18 NODE_46231_length_420_cov_53.805195_g38424_i0forward_frame_3 - 1.4 9.5 6.2 0.54 10.9 2.4 1.8 1 1 1 2 2 2 0 Nuclear transition protein 2 Ribosomal_S17 PF00366.20 NODE_46228_length_420_cov_62.644156_g38421_i0reverse_frame_3 - 0.028 14.5 0.7 0.028 14.5 0.7 1.8 2 0 0 2 2 2 0 Ribosomal protein S17 LEAP-2 PF07359.11 NODE_46228_length_420_cov_62.644156_g38421_i0reverse_frame_2 - 0.11 12.3 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) HTH_53 PF18606.1 NODE_46228_length_420_cov_62.644156_g38421_i0forward_frame_3 - 0.055 13.1 0.2 0.085 12.5 0.2 1.3 1 0 0 1 1 1 0 Zap helix turn helix N-terminal domain FRD2 PF03197.13 NODE_46227_length_420_cov_65.997403_g38420_i0reverse_frame_2 - 0.016 15.5 0.7 0.04 14.2 0.0 1.9 1 1 0 2 2 2 0 Bacteriophage FRD2 protein DUF4296 PF14129.6 NODE_46227_length_420_cov_65.997403_g38420_i0reverse_frame_2 - 0.088 13.4 1.6 0.26 11.9 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4296) HN PF00423.19 NODE_46216_length_420_cov_83.701299_g38409_i0reverse_frame_3 - 0.029 13.2 0.0 0.029 13.2 0.0 1.1 1 0 0 1 1 1 0 Haemagglutinin-neuraminidase CAP160 PF07918.11 NODE_46205_length_420_cov_138.737662_g38398_i0forward_frame_2 - 0.092 12.5 1.9 0.15 11.8 1.9 1.3 1 0 0 1 1 1 0 CAP160 repeat Sod_Cu PF00080.20 NODE_46202_length_420_cov_160.890909_g38395_i0forward_frame_3 - 0.079 13.1 0.3 0.12 12.6 0.3 1.2 1 0 0 1 1 1 0 Copper/zinc superoxide dismutase (SODC) Radial_spoke PF04712.12 NODE_46201_length_420_cov_168.890909_g38394_i0forward_frame_2 - 0.013 14.4 0.1 0.013 14.4 0.1 1.9 2 0 0 2 2 2 0 Radial spokehead-like protein Prion PF00377.18 NODE_46198_length_420_cov_207.766234_g38391_i0forward_frame_3 - 5.6 6.9 7.6 2.7 7.9 1.1 2.2 1 1 1 2 2 2 0 Prion/Doppel alpha-helical domain BolA PF01722.18 NODE_46197_length_420_cov_208.612987_g38390_i0forward_frame_3 - 1.3e-19 70.3 0.2 1.7e-19 69.8 0.2 1.2 1 0 0 1 1 1 1 BolA-like protein Radial_spoke PF04712.12 NODE_46190_length_420_cov_319.740260_g38383_i0forward_frame_2 - 0.013 14.4 0.1 0.013 14.4 0.1 1.9 2 0 0 2 2 2 0 Radial spokehead-like protein DUF4070 PF13282.6 ORF98809 - 0.08 13.1 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) FUSC PF04632.12 ORF98473 - 0.57 8.7 4.0 0.62 8.5 4.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family zf-C6H2 PF15801.5 ORF97295 - 0.011 16.0 0.5 0.028 14.7 0.5 1.6 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding DUF2688 PF10892.8 ORF97149 - 0.14 11.7 1.6 1.4 8.4 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) DUF2195 PF09961.9 ORF96103 - 0.12 12.4 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2195) CEBP_ZZ PF16366.5 ORF95657 - 0.32 11.3 2.8 0.93 9.8 1.2 2.1 2 0 0 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain TRAP_alpha PF03896.16 ORF95523 - 0.31 10.2 2.2 0.38 9.9 2.2 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit KfrA_N PF11740.8 ORF95523 - 0.88 10.3 13.6 1.2 9.8 13.2 1.4 1 1 0 1 1 1 0 Plasmid replication region DNA-binding N-term zf-C2H2 PF00096.26 ORF93916 - 1.7e-13 50.2 15.4 5.2e-06 26.6 0.1 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF93916 - 4.7e-10 39.4 20.7 1.2e-09 38.1 2.4 3.7 4 0 0 4 4 4 3 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF93916 - 2e-08 34.4 15.5 0.0092 16.7 3.6 3.4 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF93916 - 1.3e-06 28.0 9.0 0.00041 20.0 0.9 3.4 3 0 0 3 3 3 2 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 ORF93916 - 3e-05 24.2 3.5 3e-05 24.2 3.5 1.7 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-H2C2_5 PF13909.6 ORF93916 - 0.017 14.9 0.1 0.017 14.9 0.1 5.0 6 0 0 6 6 6 0 C2H2-type zinc-finger domain zf-C2HE PF16278.5 ORF93916 - 1.5 9.3 15.2 10 6.7 0.1 3.2 2 1 1 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger C1_4 PF07975.12 ORF93916 - 2.1 8.6 8.2 1.1 9.6 3.0 2.5 1 1 2 3 3 3 0 TFIIH C1-like domain LZ_Tnp_IS66 PF13007.7 ORF93571 - 0.17 12.7 0.7 0.26 12.1 0.7 1.3 1 0 0 1 1 1 0 Transposase C of IS166 homeodomain Ribosomal_L14 PF00238.19 ORF92829 - 1.2e-36 125.4 0.0 1.5e-36 125.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Acyl_transf_3 PF01757.22 ORF92546 - 2.7e-06 26.7 2.2 3.3e-06 26.4 2.2 1.1 1 0 0 1 1 1 1 Acyltransferase family TMEM154 PF15102.6 ORF92276 - 1.5e-05 24.9 5.9 3.7e-05 23.7 5.9 1.6 1 1 0 1 1 1 1 TMEM154 protein family Podoplanin PF05808.11 ORF92276 - 0.00035 20.7 5.3 0.00048 20.3 5.3 1.1 1 0 0 1 1 1 1 Podoplanin DUF4199 PF13858.6 ORF92276 - 0.059 13.8 0.0 0.083 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) Insulin_TMD PF17870.1 ORF92276 - 0.069 13.2 2.1 0.1 12.7 2.1 1.2 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Cellulose_synt PF03552.14 ORF92276 - 0.069 11.6 0.8 0.085 11.3 0.8 1.1 1 0 0 1 1 1 0 Cellulose synthase DUF5305 PF17231.2 ORF92276 - 0.081 12.3 3.1 0.13 11.6 3.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5305) Sigma_reg_N PF13800.6 ORF92276 - 0.18 12.1 5.1 0.51 10.7 0.9 2.2 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Shisa PF13908.6 ORF92276 - 1.2 9.3 7.3 2.2 8.5 7.0 1.6 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator ATP-synt_C PF00137.21 ORF90424 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C Flu_M2 PF00599.17 ORF89389 - 0.33 11.1 3.8 0.63 10.2 1.0 2.1 2 0 0 2 2 2 0 Influenza Matrix protein (M2) Phage_integrase PF00589.22 ORF88258 - 5.2e-07 29.6 0.1 6.6e-07 29.3 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family DUF2521 PF10730.9 ORF88258 - 0.013 15.5 0.1 0.028 14.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2521) Mucin_bdg PF03272.13 ORF88246 - 0.0057 16.7 0.2 0.009 16.0 0.2 1.3 1 1 0 1 1 1 1 Putative mucin or carbohydrate-binding module eIF3g PF12353.8 ORF87657 - 0.05 14.0 0.3 0.05 14.0 0.3 1.7 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 3 subunit G PI_PP_I PF18363.1 ORF87636 - 0.0018 18.4 1.7 0.0025 18.0 1.7 1.3 1 0 0 1 1 1 1 Phosphoinositide phosphatase insertion domain DUF1835 PF08874.10 ORF87636 - 0.034 14.4 0.6 0.047 13.9 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1835) MAD PF05557.13 ORF87636 - 0.044 12.2 5.6 0.046 12.1 5.1 1.3 1 1 0 1 1 1 0 Mitotic checkpoint protein Herpes_UL79 PF03049.14 ORF87636 - 0.045 13.4 0.4 0.059 13.0 0.4 1.2 1 0 0 1 1 1 0 UL79 family CCDC32 PF14989.6 ORF87636 - 0.091 12.8 4.0 0.16 12.0 4.0 1.6 1 1 0 1 1 1 0 Coiled-coil domain containing 32 Bromodomain PF00439.25 ORF87636 - 0.15 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Bromodomain XhlA PF10779.9 ORF87636 - 0.19 11.9 1.2 0.25 11.6 0.1 1.7 2 0 0 2 2 2 0 Haemolysin XhlA Syntaxin-6_N PF09177.11 ORF87636 - 0.25 11.9 3.3 0.26 11.8 0.8 2.1 1 1 0 2 2 2 0 Syntaxin 6, N-terminal DUF374 PF04028.13 ORF8759 - 0.11 12.1 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF374) Neuromodulin PF06614.11 ORF87575 - 0.067 13.4 0.4 0.067 13.4 0.4 1.4 2 0 0 2 2 2 0 Neuromodulin DUF4636 PF15468.6 ORF85344 - 0.0075 16.0 0.9 0.0098 15.6 0.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4636) DUF1440 PF07274.12 ORF85335 - 0.014 15.7 1.2 0.022 15.1 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1440) Sde2_N_Ubi PF13019.6 ORF83543 - 0.02 14.7 6.0 0.02 14.7 0.7 2.1 1 1 1 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain Sua5_yciO_yrdC PF01300.18 ORF82821 - 2.2e-28 98.9 0.0 2.5e-28 98.8 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination FlbD PF06289.11 ORF82821 - 0.033 13.8 0.3 0.074 12.7 0.3 1.5 1 0 0 1 1 1 0 Flagellar and Swarming motility proteins P3A PF08727.11 ORF78904 - 0.0031 16.9 0.0 0.0071 15.7 0.0 1.6 1 0 0 1 1 1 1 Poliovirus 3A protein like WYL_2 PF10902.8 ORF77579 - 0.012 16.0 0.4 0.033 14.5 0.4 1.7 1 0 0 1 1 1 0 WYL_2, Sm-like SH3 beta-barrel fold LPP20 PF02169.16 ORF75564 - 0.5 10.8 6.1 1.2 9.5 5.7 1.9 1 1 1 2 2 2 0 LPP20 lipoprotein DUF3159 PF11361.8 ORF73840 - 0.047 13.4 3.2 0.086 12.6 3.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3159) DUF4070 PF13282.6 ORF72652 - 0.08 13.1 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) NESP55 PF06390.12 ORF70777 - 0.011 15.3 2.8 0.014 15.0 2.8 1.1 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) DUF1126 PF06565.12 ORF70432 - 0.0059 16.4 0.2 0.0088 15.9 0.2 1.4 1 0 0 1 1 1 1 DUF1126 PH-like domain RCC1_2 PF13540.6 ORF70293 - 1.6e-10 40.5 3.4 0.011 15.5 0.0 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PI3K_p85B PF02192.16 ORF70033 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF70033 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 DUF3382 PF11862.8 ORF69385 - 0.036 14.3 0.4 0.11 12.8 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3382) HBB PF06777.11 ORF66611 - 0.07 12.8 0.1 0.2 11.3 0.0 1.6 2 0 0 2 2 2 0 Helical and beta-bridge domain HCV_capsid PF01543.17 ORF66478 - 0.028 14.6 0.1 0.043 14.0 0.1 1.3 1 0 0 1 1 1 0 Hepatitis C virus capsid protein Phage_portal_2 PF05136.13 ORF66478 - 0.066 12.4 0.5 0.65 9.1 0.3 1.9 1 1 1 2 2 2 0 Phage portal protein, lambda family Lipocalin_5 PF13924.6 ORF64816 - 0.064 13.0 1.0 0.087 12.6 0.3 1.6 2 0 0 2 2 2 0 Lipocalin-like domain Metallothio_Cad PF07846.11 ORF63115 - 0.094 12.8 8.1 0.25 11.5 2.1 2.6 2 0 0 2 2 2 0 Metallothionein family PI_PP_I PF18363.1 ORF6256 - 0.0018 18.4 1.7 0.0025 18.0 1.7 1.3 1 0 0 1 1 1 1 Phosphoinositide phosphatase insertion domain DUF1835 PF08874.10 ORF6256 - 0.034 14.4 0.6 0.047 13.9 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1835) MAD PF05557.13 ORF6256 - 0.044 12.2 5.6 0.046 12.1 5.1 1.3 1 1 0 1 1 1 0 Mitotic checkpoint protein Herpes_UL79 PF03049.14 ORF6256 - 0.045 13.4 0.4 0.059 13.0 0.4 1.2 1 0 0 1 1 1 0 UL79 family CCDC32 PF14989.6 ORF6256 - 0.092 12.7 4.0 0.16 12.0 4.0 1.6 1 1 0 1 1 1 0 Coiled-coil domain containing 32 Bromodomain PF00439.25 ORF6256 - 0.15 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Bromodomain XhlA PF10779.9 ORF6256 - 0.19 11.9 1.2 0.25 11.6 0.1 1.7 2 0 0 2 2 2 0 Haemolysin XhlA Syntaxin-6_N PF09177.11 ORF6256 - 0.26 11.9 3.3 0.23 12.0 0.7 2.1 1 1 0 2 2 2 0 Syntaxin 6, N-terminal PI3K_p85B PF02192.16 ORF56066 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF56066 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 SLATT_5 PF18160.1 ORF5540 - 0.0078 15.5 5.5 0.011 15.1 5.5 1.4 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 5 Chordopox_A33R PF05966.12 ORF5540 - 0.29 10.4 8.5 0.31 10.3 1.0 2.1 1 1 1 2 2 2 0 Chordopoxvirus A33R protein ETRAMP PF09716.10 ORF5540 - 2.4 8.3 11.5 19 5.4 11.5 2.1 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) TMEM252 PF15664.5 ORF54533 - 0.11 12.2 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 252 family UPF0444 PF15475.6 ORF53577 - 5 7.5 10.5 10 6.5 10.5 1.7 1 1 0 1 1 1 0 Transmembrane protein C12orf23, UPF0444 ATP-synt_C PF00137.21 ORF53036 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C DUF3874 PF12990.7 ORF52086 - 0.0026 18.0 0.1 0.0046 17.3 0.1 1.4 1 0 0 1 1 1 1 Domain of unknonw function from B. Theta Gene description (DUF3874) Myticin-prepro PF10690.9 ORF51208 - 0.18 12.1 7.7 1.1 9.5 3.7 2.2 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel Methyltransf_16 PF10294.9 ORF50446 - 0.0048 16.7 0.0 0.0059 16.4 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase Clat_adaptor_s PF01217.20 ORF50322 - 0.071 13.1 2.0 5.8 6.8 0.1 2.9 1 1 1 3 3 3 0 Clathrin adaptor complex small chain SpoIIIAC PF06686.11 ORF50322 - 0.93 9.7 8.4 4.3 7.6 1.0 3.3 3 0 0 3 3 3 0 Stage III sporulation protein AC/AD protein family YaiA PF16362.5 ORF49612 - 5.2e-39 132.1 4.3 6.7e-39 131.8 4.3 1.1 1 0 0 1 1 1 1 YaiA protein RRM_1 PF00076.22 ORF46436 - 1.5e-14 53.5 0.0 3.2e-14 52.5 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF46436 - 0.061 13.2 0.0 0.092 12.6 0.0 1.3 1 0 0 1 1 1 0 Occluded RNA-recognition motif HBS1_N PF08938.10 ORF46436 - 0.28 11.5 2.1 6.5 7.1 0.0 2.3 2 0 0 2 2 2 0 HBS1 N-terminus PI3K_p85B PF02192.16 ORF46412 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF46412 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 Cation_ATPase PF13246.6 ORF46353 - 0.014 15.5 0.1 0.02 14.9 0.1 1.2 1 0 0 1 1 1 0 Cation transport ATPase (P-type) Fer4_19 PF06902.11 ORF46272 - 2.3e-28 98.1 0.0 4.2e-28 97.2 0.0 1.4 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster zf-C2H2 PF00096.26 ORF44807 - 1.7e-13 50.2 15.4 5.2e-06 26.6 0.1 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF44807 - 4.7e-10 39.4 20.7 1.2e-09 38.1 2.4 3.7 4 0 0 4 4 4 3 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF44807 - 2e-08 34.4 15.5 0.0092 16.7 3.6 3.4 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF44807 - 1.3e-06 28.0 9.0 0.00041 20.0 0.9 3.4 3 0 0 3 3 3 2 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 ORF44807 - 3e-05 24.2 3.5 3e-05 24.2 3.5 1.7 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-H2C2_5 PF13909.6 ORF44807 - 0.017 14.9 0.1 0.017 14.9 0.1 5.0 6 0 0 6 6 6 0 C2H2-type zinc-finger domain zf-C2HE PF16278.5 ORF44807 - 1.5 9.3 15.2 10 6.7 0.1 3.2 2 1 1 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger C1_4 PF07975.12 ORF44807 - 2.1 8.6 8.2 1.1 9.6 3.0 2.5 1 1 2 3 3 3 0 TFIIH C1-like domain DnaJ PF00226.31 ORF41671 - 5.5e-14 52.0 0.0 8.2e-14 51.5 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain Cation_ATPase_C PF00689.21 ORF41428 - 0.024 14.4 0.0 0.03 14.0 0.0 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus NLRC4_HD2 PF17776.1 ORF41428 - 0.042 14.4 0.0 0.08 13.5 0.0 1.4 1 0 0 1 1 1 0 NLRC4 helical domain HD2 NST1 PF13945.6 ORF41428 - 0.068 13.3 1.4 0.09 12.9 1.4 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator FeoB_associated PF12669.7 ORF41428 - 0.13 12.6 0.4 0.22 11.9 0.4 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Ank_4 PF13637.6 ORF40872 - 3.1e-11 43.6 0.3 4.3e-08 33.5 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF40872 - 3.8e-11 43.0 0.4 9.2e-11 41.8 0.2 1.8 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF40872 - 4.4e-11 43.2 0.0 8.2e-11 42.4 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF40872 - 3.2e-09 36.8 0.2 1.1e-06 28.8 0.1 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF40872 - 3.8e-09 36.0 0.2 5.7e-06 26.3 0.1 3.3 2 1 0 2 2 2 1 Ankyrin repeat Cas_Cas5d PF09704.10 ORF40872 - 0.039 13.8 0.0 0.043 13.7 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas5) Pkinase PF00069.25 ORF39988 - 1.1e-10 41.4 0.0 1.3e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Rv2175c_C PF18367.1 ORF39988 - 0.054 13.6 0.2 0.085 13.0 0.2 1.3 1 0 0 1 1 1 0 Rv2175c C-terminal domain of unknown function zf-C2H2 PF00096.26 ORF3954 - 1.7e-13 50.2 15.4 5.2e-06 26.6 0.1 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF3954 - 4.7e-10 39.4 20.7 1.2e-09 38.1 2.4 3.7 4 0 0 4 4 4 3 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF3954 - 2e-08 34.4 15.5 0.0092 16.7 3.6 3.4 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF3954 - 1.3e-06 28.0 9.0 0.00041 20.0 0.9 3.4 3 0 0 3 3 3 2 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 ORF3954 - 3e-05 24.2 3.5 3e-05 24.2 3.5 1.7 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-H2C2_5 PF13909.6 ORF3954 - 0.017 14.9 0.1 0.017 14.9 0.1 5.0 6 0 0 6 6 6 0 C2H2-type zinc-finger domain zf-C2HE PF16278.5 ORF3954 - 1.5 9.3 15.2 10 6.7 0.1 3.2 2 1 1 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger C1_4 PF07975.12 ORF3954 - 2.1 8.6 8.2 1.1 9.6 3.0 2.5 1 1 2 3 3 3 0 TFIIH C1-like domain DUF4468 PF14730.6 ORF37619 - 0.14 12.5 0.0 0.22 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold TPR_6 PF13174.6 ORF37619 - 0.55 11.0 2.4 0.67 10.7 0.5 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF4070 PF13282.6 ORF36660 - 0.08 13.1 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) Proton_antipo_C PF01010.19 ORF35802 - 0.0034 17.0 0.7 0.0043 16.7 0.7 1.1 1 0 0 1 1 1 1 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus GREB1 PF15782.5 ORF35036 - 1 6.4 5.2 1.1 6.3 5.2 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer GREB1 PF15782.5 ORF34354 - 6.4 3.7 12.8 6.6 3.7 12.8 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer ubiquitin PF00240.23 ORF33814 - 0.00013 21.6 0.0 0.0002 21.0 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Pkinase PF00069.25 ORF33384 - 2.4e-14 53.4 0.6 3.4e-14 52.9 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain Amidase_6 PF12671.7 ORF33384 - 0.0084 16.2 0.5 0.01 16.0 0.5 1.1 1 0 0 1 1 1 1 Putative amidase domain Profilin PF00235.19 ORF32451 - 8.6e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Profilin DUF2723 PF11028.8 ORF31199 - 0.15 12.0 4.4 0.25 11.3 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2723) PI3K_p85B PF02192.16 ORF31078 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF31078 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 Macro PF01661.21 ORF30624 - 3.8e-16 59.2 0.0 5.6e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 Macro domain DUF3783 PF12646.7 ORF30624 - 0.0065 16.4 0.2 0.23 11.4 0.1 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF3783) mRNA_decap_C PF16741.5 ORF30002 - 0.061 12.6 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 mRNA-decapping enzyme C-terminus DIMCO_N PF16844.5 ORF29949 - 0.05 13.9 0.0 0.8 10.1 0.0 2.0 2 0 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor, N-terminal Nebulin PF00880.18 ORF29836 - 0.036 14.0 2.4 0.15 12.0 2.4 2.2 1 0 0 1 1 1 0 Nebulin repeat Ycf66_N PF07444.11 ORF29446 - 0.0099 16.0 0.3 0.014 15.5 0.3 1.3 1 0 0 1 1 1 1 Ycf66 protein N-terminus IES5 PF17335.2 ORF28448 - 0.015 15.6 0.2 0.026 14.8 0.1 1.6 2 0 0 2 2 2 0 Ino80 complex subunit 5 GATase_4 PF13230.6 ORF27570 - 0.16 10.8 0.1 0.18 10.7 0.1 1.1 1 0 0 1 1 1 0 Glutamine amidotransferases class-II Fer4 PF00037.27 ORF27126 - 1.1e-13 50.4 12.4 6.6e-07 28.9 3.1 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 ORF27126 - 2.3e-12 47.3 28.1 5.4e-11 42.9 11.7 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF27126 - 2.5e-11 43.5 23.9 1.8e-07 31.2 13.5 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF27126 - 6.2e-11 42.3 20.2 8e-09 35.5 10.4 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF27126 - 1.7e-10 40.5 12.5 7.7e-06 25.8 2.3 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 ORF27126 - 1.3e-09 38.5 6.3 0.00015 22.3 0.7 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF27126 - 1.9e-09 37.5 28.0 8.3e-08 32.2 13.1 2.7 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF27126 - 1.1e-07 32.6 11.2 0.00042 21.2 1.3 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 ORF27126 - 5.2e-07 29.7 17.7 0.00074 19.8 2.0 3.2 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_13 PF13370.6 ORF27126 - 8.7e-06 26.2 6.3 0.0014 19.2 0.6 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_2 PF12797.7 ORF27126 - 2.1e-05 24.3 16.5 0.00034 20.5 3.1 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 ORF27126 - 3.8e-05 23.9 8.6 0.027 14.7 1.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF27126 - 5.3e-05 23.6 12.0 5.3e-05 23.6 12.0 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF27126 - 0.0039 18.0 0.4 0.0039 18.0 0.4 2.9 3 1 0 3 3 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF27126 - 0.005 17.7 4.4 0.005 17.7 4.4 3.3 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 ORF27126 - 0.0075 17.0 7.8 0.043 14.6 0.7 2.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain ETF_QO PF05187.13 ORF27126 - 0.012 15.7 1.4 0.018 15.2 1.4 1.3 1 0 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fungal_lectin PF07938.12 ORF27126 - 0.056 12.8 0.0 0.077 12.4 0.0 1.1 1 0 0 1 1 1 0 Fungal fucose-specific lectin Lipase_3 PF01764.25 ORF26732 - 7.8e-13 48.5 0.1 1.1e-12 48.1 0.1 1.2 1 0 0 1 1 1 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF26732 - 0.0025 17.1 0.0 0.0029 16.9 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF26732 - 0.0046 16.5 0.0 0.0048 16.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_5 PF12695.7 ORF26732 - 0.0047 16.7 0.0 0.0066 16.2 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF26732 - 0.0091 16.1 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_1 PF00561.20 ORF26732 - 0.15 11.7 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Hum_adeno_E3A PF05393.11 ORF26030 - 0.25 11.3 12.3 0.059 13.4 8.8 1.8 1 1 0 1 1 1 0 Human adenovirus early E3A glycoprotein Conotoxin PF02950.17 ORF2594 - 2.5 9.2 15.0 2.7 9.0 0.5 3.2 1 1 2 3 3 3 0 Conotoxin Plasmodium_HRP PF05403.11 ORF25707 - 0.054 13.3 3.4 0.032 14.0 1.8 1.4 1 1 0 1 1 1 0 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF25707 - 0.39 10.7 5.2 3.9 7.5 0.6 2.4 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain Ribosomal_L22 PF00237.19 ORF25707 - 7.2 6.9 16.7 7.7e+02 0.4 16.7 2.2 1 1 0 1 1 1 0 Ribosomal protein L22p/L17e Ser_hydrolase PF06821.13 ORF2460 - 2.9e-06 27.3 0.0 4.9e-06 26.5 0.0 1.3 1 1 0 1 1 1 1 Serine hydrolase Abhydrolase_6 PF12697.7 ORF2460 - 3.6e-06 27.7 2.2 0.0012 19.5 1.1 2.0 1 1 1 2 2 2 2 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF2460 - 0.04 13.2 0.0 2.1 7.5 0.1 2.0 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF2460 - 0.045 13.4 0.1 1.2 8.8 0.1 2.0 1 1 0 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 ORF2460 - 0.045 13.6 0.0 0.14 12.0 0.0 1.7 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Thioesterase PF00975.20 ORF2460 - 0.13 12.3 0.0 0.56 10.3 0.0 1.8 2 0 0 2 2 2 0 Thioesterase domain PHD_4 PF16866.5 ORF24396 - 0.0053 16.8 1.3 0.011 15.9 1.3 1.5 1 0 0 1 1 1 1 PHD-finger Ribosomal_L7Ae PF01248.26 ORF24295 - 9.5e-22 76.6 1.0 1.3e-21 76.1 1.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LigB PF02900.18 ORF24295 - 0.0061 15.7 0.1 0.04 13.0 0.0 1.9 1 1 1 2 2 2 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase UPF0147 PF03685.13 ORF24295 - 0.14 12.2 0.2 0.21 11.6 0.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) Pkinase PF00069.25 ORF23864 - 3.6e-19 69.2 0.0 4.2e-19 68.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF23864 - 3.5e-11 42.9 0.0 4.4e-11 42.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DAO PF01266.24 ORF22830 - 1.1e-12 48.3 0.0 1.1e-12 48.2 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Rif1_N PF12231.8 ORF22559 - 0.02 13.9 0.2 0.024 13.6 0.2 1.1 1 0 0 1 1 1 0 Rap1-interacting factor 1 N terminal DUF1043 PF06295.12 ORF22559 - 0.03 14.3 1.3 0.04 13.9 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) HD_3 PF13023.6 ORF19465 - 0.17 11.8 3.3 1.6 8.6 0.3 2.0 1 1 1 2 2 2 0 HD domain DUF4284 PF14112.6 ORF19465 - 0.23 12.4 5.3 0.19 12.7 3.6 1.6 1 1 0 1 1 1 0 Immunity protein 22 ABC2_membrane_3 PF12698.7 ORF19465 - 0.79 8.8 4.0 0.88 8.6 4.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein ATP-synt_C PF00137.21 ORF18124 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C DUF1731 PF08338.11 ORF17154 - 0.058 13.2 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1731) DUF805 PF05656.14 ORF17154 - 3.5 8.1 7.3 15 6.1 7.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF805) Fer2_2 PF01799.20 ORF15963 - 0.00029 20.8 0.4 0.00047 20.1 0.4 1.4 1 0 0 1 1 1 1 [2Fe-2S] binding domain BetR PF08667.10 ORF152924 - 0.14 12.1 0.0 0.34 10.9 0.0 1.6 2 0 0 2 2 2 0 BetR domain Proteasome_A_N PF10584.9 ORF152924 - 0.22 11.2 0.3 5.1 6.9 0.1 2.3 2 0 0 2 2 2 0 Proteasome subunit A N-terminal signature DUF2107 PF09880.9 ORF151455 - 0.094 12.8 0.7 0.25 11.5 0.1 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2107) TMEM252 PF15664.5 ORF151320 - 0.11 12.2 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 252 family Conotoxin PF02950.17 ORF149796 - 2.5 9.2 15.0 2.7 9.0 0.5 3.2 1 1 2 3 3 3 0 Conotoxin bZIP_2 PF07716.15 ORF149333 - 3e-06 27.2 10.1 5.3e-06 26.4 10.1 1.5 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF149333 - 0.0006 19.9 5.3 0.0013 18.8 5.3 1.6 1 0 0 1 1 1 1 bZIP transcription factor BCAS3 PF12490.8 ORF149333 - 0.17 11.4 1.4 0.28 10.6 0.8 1.6 1 1 0 2 2 2 0 Breast carcinoma amplified sequence 3 zf-C2H2 PF00096.26 ORF14917 - 1.7e-13 50.2 15.4 5.2e-06 26.6 0.1 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF14917 - 4.7e-10 39.4 20.7 1.2e-09 38.1 2.4 3.7 4 0 0 4 4 4 3 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF14917 - 2e-08 34.4 15.5 0.0092 16.7 3.6 3.4 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF14917 - 1.3e-06 28.0 9.0 0.00041 20.0 0.9 3.4 3 0 0 3 3 3 2 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 ORF14917 - 3e-05 24.2 3.5 3e-05 24.2 3.5 1.7 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-H2C2_5 PF13909.6 ORF14917 - 0.017 14.9 0.1 0.017 14.9 0.1 5.0 6 0 0 6 6 6 0 C2H2-type zinc-finger domain zf-C2HE PF16278.5 ORF14917 - 1.5 9.3 15.2 10 6.7 0.1 3.2 2 1 1 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger C1_4 PF07975.12 ORF14917 - 2.1 8.6 8.2 1.1 9.6 3.0 2.5 1 1 2 3 3 3 0 TFIIH C1-like domain Rubis-subs-bind PF09273.11 ORF148809 - 0.00021 22.0 1.1 0.00026 21.7 1.1 1.2 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding DUF3367 PF11847.8 ORF148717 - 1.2 6.9 3.0 1.3 6.8 3.0 1.1 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase PAP_assoc PF03828.19 ORF147473 - 0.00022 21.4 0.1 0.00047 20.3 0.1 1.5 1 0 0 1 1 1 1 Cid1 family poly A polymerase Complex1_30kDa PF00329.19 ORF144645 - 0.089 13.4 0.0 0.11 13.1 0.0 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Radial_spoke PF04712.12 ORF144094 - 1.1e-14 54.2 0.2 1.2e-14 54.2 0.2 1.1 1 0 0 1 1 1 1 Radial spokehead-like protein PI3K_p85B PF02192.16 ORF143905 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF143905 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 Oxidored_q3 PF00499.20 ORF139692 - 2.6e-14 53.2 4.9 3.1e-14 52.9 4.9 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Frizzled PF01534.17 ORF139692 - 0.01 14.9 0.0 0.011 14.8 0.0 1.2 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region PhoLip_ATPase_C PF16212.5 ORF139692 - 0.13 12.0 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal DUF3382 PF11862.8 ORF139692 - 0.94 9.8 5.5 0.4 11.0 2.3 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF3382) PI3_PI4_kinase PF00454.27 ORF136872 - 7.8e-07 29.2 0.1 1.1e-06 28.6 0.1 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase ATP-synt_C PF00137.21 ORF136722 - 2.4e-17 63.0 6.8 2.4e-17 63.0 6.8 1.8 2 0 0 2 2 2 1 ATP synthase subunit C TEX13 PF15186.6 ORF136367 - 0.0053 16.5 3.9 0.0073 16.0 3.6 1.4 1 1 0 1 1 1 1 Testis-expressed sequence 13 protein family Med9 PF07544.13 ORF136367 - 0.035 14.2 8.2 0.079 13.1 8.2 1.6 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 IZUMO PF15005.6 ORF136367 - 0.11 13.0 10.0 0.14 12.7 8.8 1.7 1 1 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated Mto2_bdg PF12808.7 ORF136367 - 2.7 8.3 8.2 0.19 12.1 1.4 2.4 2 1 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region DUF4140 PF13600.6 ORF136367 - 3.4 8.2 6.1 15 6.1 0.6 2.4 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DivIC PF04977.15 ORF136367 - 8.2 6.3 18.8 5.2 6.9 7.5 3.0 1 1 1 3 3 3 0 Septum formation initiator DUF2274 PF10038.9 ORF135741 - 0.008 16.6 0.0 0.013 15.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2274) HATPase_c PF02518.26 ORF133131 - 3.3e-15 56.5 0.3 5.3e-15 55.9 0.1 1.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF133131 - 0.00021 21.1 0.3 0.0015 18.4 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EF-hand_7 PF13499.6 ORF132003 - 1.8e-15 57.1 1.0 8.1e-12 45.4 0.4 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF132003 - 1.2e-13 49.5 2.1 0.00043 19.6 0.2 3.6 3 1 1 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF132003 - 2.2e-13 49.0 2.2 0.0021 17.8 0.1 3.6 3 1 1 4 4 4 3 EF-hand domain EF-hand_8 PF13833.6 ORF132003 - 3.6e-07 29.9 3.3 2.2e-05 24.2 0.5 2.8 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF132003 - 1.1e-06 27.9 4.5 0.087 12.4 0.1 4.1 4 0 0 4 4 4 3 EF hand UBA PF00627.31 ORF132003 - 0.029 14.3 1.2 2.9 7.9 0.0 2.6 3 0 0 3 3 3 0 UBA/TS-N domain EF-hand_9 PF14658.6 ORF132003 - 0.059 13.7 0.0 15 6.0 0.0 2.4 2 1 0 2 2 2 0 EF-hand domain EF-hand_4 PF12763.7 ORF132003 - 0.098 12.6 0.2 1.9 8.5 0.0 2.5 2 1 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand Cyt-b5 PF00173.28 ORF129338 - 1e-22 80.0 0.0 1.1e-22 80.0 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks186.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks186.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks186.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks186.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Med24_N PF11277.8 ORF128440 - 0.073 11.1 5.8 0.079 11.0 5.8 1.1 1 0 0 1 1 1 0 Mediator complex subunit 24 N-terminal PUA_2 PF14306.6 ORF128206 - 0.067 12.9 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 PUA-like domain NAD_binding_10 PF13460.6 ORF128169 - 8.3e-11 42.1 0.0 1.2e-10 41.6 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Xan_ur_permease PF00860.20 ORF127241 - 2.9e-43 148.0 11.0 3.5e-43 147.8 11.0 1.0 1 0 0 1 1 1 1 Permease family DUF5423 PF17461.2 ORF127241 - 0.22 10.3 1.0 0.32 9.8 1.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Claudin_2 PF13903.6 ORF127241 - 9.9 5.9 7.4 37 4.0 7.0 1.9 1 1 2 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction bZIP_2 PF07716.15 ORF127224 - 3e-06 27.2 10.1 5.3e-06 26.4 10.1 1.5 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF127224 - 0.0006 19.9 5.3 0.0013 18.8 5.3 1.6 1 0 0 1 1 1 1 bZIP transcription factor BCAS3 PF12490.8 ORF127224 - 0.17 11.4 1.4 0.28 10.6 0.8 1.6 1 1 0 2 2 2 0 Breast carcinoma amplified sequence 3 HHA PF05321.11 ORF126495 - 7e-33 112.7 0.3 9.8e-33 112.3 0.3 1.2 1 0 0 1 1 1 1 Haemolysin expression modulating protein Sars6 PF12133.8 ORF126495 - 5.3 7.0 5.8 0.94 9.4 0.3 2.4 2 1 1 3 3 3 0 Open reading frame 6 from SARS coronavirus DUF4307 PF14155.6 ORF126494 - 0.098 12.5 3.2 0.16 11.8 3.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) bZIP_2 PF07716.15 ORF126273 - 3e-06 27.2 10.1 5.3e-06 26.4 10.1 1.5 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF126273 - 0.0006 19.9 5.3 0.0013 18.8 5.3 1.6 1 0 0 1 1 1 1 bZIP transcription factor BCAS3 PF12490.8 ORF126273 - 0.17 11.4 1.4 0.28 10.6 0.8 1.6 1 1 0 2 2 2 0 Breast carcinoma amplified sequence 3 STE2 PF02116.15 ORF124807 - 0.041 13.2 0.2 0.056 12.7 0.2 1.2 1 0 0 1 1 1 0 Fungal pheromone mating factor STE2 GPCR Sod_Cu PF00080.20 ORF121429 - 0.062 13.5 0.3 0.11 12.6 0.3 1.7 1 1 0 1 1 1 0 Copper/zinc superoxide dismutase (SODC) PP-binding PF00550.25 ORF121174 - 2.6e-06 27.7 0.1 3.9e-06 27.1 0.1 1.3 1 0 0 1 1 1 1 Phosphopantetheine attachment site Extensin_2 PF04554.13 ORF120174 - 0.58 10.3 7.6 1 9.5 7.6 1.4 1 1 0 1 1 1 0 Extensin-like region Sporozoite_P67 PF05642.11 ORF119881 - 9.8 4.1 5.9 11 4.0 5.9 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Peptidase_C97 PF05903.14 ORF119574 - 0.044 13.6 0.1 0.071 12.9 0.1 1.4 1 1 0 1 1 1 0 PPPDE putative peptidase domain STE2 PF02116.15 ORF1194 - 0.041 13.2 0.2 0.056 12.7 0.2 1.2 1 0 0 1 1 1 0 Fungal pheromone mating factor STE2 GPCR RNAse_A_bac PF18431.1 ORF118839 - 0.11 13.5 0.0 0.15 13.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial CdiA-CT RNAse A domain zf-CCHC_6 PF15288.6 ORF118679 - 1.2 9.0 0.1 1.2 9.0 0.1 2.7 3 0 0 3 3 3 0 Zinc knuckle zf-TAZ PF02135.16 ORF11677 - 0.0048 17.3 3.9 0.0048 17.3 3.9 2.2 2 0 0 2 2 2 1 TAZ zinc finger PI_PP_I PF18363.1 ORF116711 - 0.0018 18.4 1.7 0.0025 18.0 1.7 1.3 1 0 0 1 1 1 1 Phosphoinositide phosphatase insertion domain DUF1835 PF08874.10 ORF116711 - 0.034 14.4 0.6 0.047 13.9 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1835) MAD PF05557.13 ORF116711 - 0.044 12.2 5.6 0.046 12.1 5.1 1.3 1 1 0 1 1 1 0 Mitotic checkpoint protein Herpes_UL79 PF03049.14 ORF116711 - 0.045 13.4 0.4 0.059 13.0 0.4 1.2 1 0 0 1 1 1 0 UL79 family CCDC32 PF14989.6 ORF116711 - 0.091 12.8 4.0 0.16 12.0 4.0 1.6 1 1 0 1 1 1 0 Coiled-coil domain containing 32 Bromodomain PF00439.25 ORF116711 - 0.15 12.1 0.0 0.27 11.3 0.0 1.4 1 0 0 1 1 1 0 Bromodomain XhlA PF10779.9 ORF116711 - 0.19 11.9 1.2 0.25 11.6 0.1 1.7 2 0 0 2 2 2 0 Haemolysin XhlA Syntaxin-6_N PF09177.11 ORF116711 - 0.25 11.9 3.3 0.26 11.8 0.8 2.1 1 1 0 2 2 2 0 Syntaxin 6, N-terminal TMEM252 PF15664.5 ORF116060 - 0.11 12.2 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 Transmembrane protein 252 family NRIP1_repr_1 PF15687.5 ORF114677 - 0.19 11.4 0.2 0.23 11.1 0.2 1.1 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 1 SVWC PF15430.6 ORF114337 - 0.064 13.5 0.6 0.11 12.7 0.1 1.7 2 0 0 2 2 2 0 Single domain von Willebrand factor type C Amelogenin PF02948.15 ORF112225 - 8.1 7.1 18.7 3.3 8.3 16.5 1.4 1 1 0 1 1 1 0 Amelogenin Histone PF00125.24 ORF11133 - 6.7e-52 175.3 3.3 7.4e-52 175.2 3.3 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 ORF11133 - 0.0001 22.6 0.1 0.00017 21.9 0.1 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF11133 - 0.00023 21.3 1.1 0.00025 21.1 0.2 1.6 2 0 0 2 2 2 1 Centromere kinetochore component CENP-T histone fold PAF PF15715.5 ORF11133 - 0.0015 19.2 1.3 0.0018 18.9 1.3 1.2 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CBFD_NFYB_HMF PF00808.23 ORF11133 - 0.0017 18.6 0.2 0.0034 17.6 0.2 1.5 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF11133 - 0.0027 17.7 0.1 0.0045 17.1 0.1 1.3 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit DUF5520 PF17658.1 ORF110861 - 0.026 13.6 0.0 0.033 13.3 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5520) DUF3591 PF12157.8 ORF110333 - 0.032 12.9 0.0 0.042 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3591) PI3K_p85B PF02192.16 ORF110133 - 0.0065 16.2 0.1 0.78 9.5 0.1 2.2 1 1 0 1 1 1 1 PI3-kinase family, p85-binding domain MRP-L46 PF11788.8 ORF110133 - 0.075 13.8 0.0 0.17 12.7 0.0 1.6 2 0 0 2 2 2 0 39S mitochondrial ribosomal protein L46 DHHC PF01529.20 ORF109350 - 0.11 12.6 2.7 0.3 11.2 1.3 2.0 2 0 0 2 2 2 0 DHHC palmitoyltransferase DUF3254 PF11630.8 ORF109350 - 0.29 11.3 3.2 0.53 10.5 3.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3254) Inhibitor_I42 PF09394.10 ORF109261 - 3.7e-15 56.1 0.0 6.1e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 Myb_DNA-bind_5 PF13873.6 ORF108138 - 0.18 11.9 0.2 7.1 6.8 0.1 2.1 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain RepA_C PF04796.12 ORF106749 - 0.068 13.2 0.2 0.094 12.7 0.2 1.4 1 1 0 1 1 1 0 Plasmid encoded RepA protein Sirohm_synth_C PF14823.6 ORF106206 - 3 7.5 6.4 3.6 7.3 3.3 2.2 2 0 0 2 2 2 0 Sirohaem biosynthesis protein C-terminal Inhibitor_I68 PF10468.9 ORF105693 - 0.0029 18.0 0.8 0.0052 17.2 0.8 1.4 1 0 0 1 1 1 1 Carboxypeptidase inhibitor I68 Inhibitor_I42 PF09394.10 ORF105187 - 3.7e-15 56.1 0.0 6.1e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 CoA_transf_3 PF02515.17 ORF104599 - 8.5e-29 100.8 0.0 9.4e-29 100.7 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III DUF4070 PF13282.6 ORF102780 - 0.08 13.1 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) DUF1324 PF07038.11 ORF101926 - 0.13 12.6 2.1 0.2 11.9 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1324) Golgin_A5 PF09787.9 ORF100280 - 5.7e-05 22.7 5.0 0.00022 20.8 4.7 1.8 1 1 0 1 1 1 1 Golgin subfamily A member 5 CASP_C PF08172.12 ORF100280 - 0.0076 15.6 1.6 0.014 14.8 0.4 1.8 2 0 0 2 2 2 1 CASP C terminal HOOK PF05622.12 ORF100280 - 0.015 13.5 0.1 0.017 13.3 0.1 1.0 1 0 0 1 1 1 0 HOOK protein CCB1 PF12046.8 NODE_46857_length_412_cov_1.421751_g39031_i0reverse_frame_1 - 0.028 13.8 0.4 0.039 13.3 0.4 1.3 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B Cytidylate_kin PF02224.18 NODE_46839_length_412_cov_2.726790_g39013_i0reverse_frame_1 - 0.08 12.7 0.2 0.11 12.2 0.2 1.1 1 0 0 1 1 1 0 Cytidylate kinase CTV_P6 PF06706.11 NODE_46839_length_412_cov_2.726790_g39013_i0reverse_frame_1 - 1.3 8.8 4.8 2.5 7.9 0.4 2.9 2 1 1 3 3 3 0 Citrus tristeza virus 6-kDa protein FAM124 PF15067.6 NODE_46836_length_412_cov_2.835544_g39010_i0reverse_frame_1 - 0.13 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 FAM124 family HicA_toxin PF07927.12 NODE_46835_length_412_cov_2.840849_g39009_i0forward_frame_1 - 1.7e-06 27.9 0.0 3.2e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, HicB_lk_antitox PF15919.5 NODE_46835_length_412_cov_2.840849_g39009_i0forward_frame_1 - 0.0013 18.8 0.1 0.0018 18.4 0.1 1.2 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF3103 PF11301.8 NODE_46831_length_412_cov_3.347480_g39005_i0forward_frame_1 - 0.037 12.8 0.0 0.044 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3103) UL41A PF17591.2 NODE_46828_length_412_cov_3.657825_g39002_i0reverse_frame_1 - 0.012 15.7 1.8 0.021 14.9 1.8 1.5 1 0 0 1 1 1 0 Herpesvirus UL41A PDR_CDR PF06422.12 NODE_46828_length_412_cov_3.657825_g39002_i0reverse_frame_1 - 0.043 13.7 1.2 0.085 12.8 1.2 1.5 1 0 0 1 1 1 0 CDR ABC transporter DUF3593 PF12159.8 NODE_46828_length_412_cov_3.657825_g39002_i0reverse_frame_1 - 0.065 13.3 1.7 0.39 10.8 2.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3593) E7 PF00527.18 NODE_46823_length_412_cov_41.657825_g38997_i0reverse_frame_1 - 0.017 15.3 0.8 0.027 14.7 0.8 1.3 1 0 0 1 1 1 0 E7 protein, Early protein NapE PF06796.11 NODE_46819_length_412_cov_55.660477_g38994_i0forward_frame_1 - 2.9 7.5 8.6 37 3.9 6.6 2.3 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE DUF2193 PF09959.9 NODE_46812_length_412_cov_77.954907_g38987_i0forward_frame_1 - 0.22 9.9 0.1 0.24 9.8 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2193) Cdc13_OB2 PF18691.1 NODE_46811_length_412_cov_79.832891_g38986_i0reverse_frame_1 - 0.12 12.4 5.1 0.28 11.2 0.7 2.6 1 1 1 2 2 2 0 Cell division control protein 13, OB2 domain IL32 PF15225.6 NODE_46807_length_412_cov_86.965517_g38982_i0reverse_frame_1 - 0.099 13.0 2.1 0.31 11.4 0.7 2.0 2 0 0 2 2 2 0 Interleukin 32 Cornifin PF02389.15 NODE_46804_length_412_cov_93.994695_g38979_i0reverse_frame_1 - 0.19 11.9 5.8 0.61 10.3 5.8 1.8 1 1 0 1 1 1 0 Cornifin (SPRR) family DUF244 PF03112.14 NODE_46776_length_413_cov_1.753968_g38953_i0forward_frame_1 - 0.016 15.0 1.0 0.022 14.6 1.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF DUF1534 PF07551.11 NODE_46770_length_413_cov_2.455026_g38947_i0forward_frame_1 - 0.046 13.5 0.1 0.085 12.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1534) MNSV_P7B PF06692.11 NODE_46768_length_413_cov_2.534392_g38945_i0forward_frame_1 - 0.054 13.5 0.3 0.1 12.6 0.3 1.4 1 0 0 1 1 1 0 Melon necrotic spot virus P7B protein RGCC PF15151.6 NODE_46756_length_413_cov_57.198413_g38933_i0reverse_frame_1 - 0.51 10.6 2.8 0.49 10.6 1.1 1.9 1 1 0 1 1 1 0 Response gene to complement 32 protein family DUF4588 PF15251.6 NODE_46750_length_413_cov_74.219577_g38927_i0forward_frame_1 - 0.024 14.4 0.2 0.027 14.2 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4588) CxC6 PF18721.1 NODE_46750_length_413_cov_74.219577_g38927_i0forward_frame_1 - 0.1 12.8 0.0 0.19 12.0 0.0 1.4 1 0 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases Mut7-C PF01927.16 NODE_46741_length_413_cov_94.783069_g38918_i0reverse_frame_1 - 2.5e-17 63.3 0.1 3e-17 63.1 0.1 1.1 1 0 0 1 1 1 1 Mut7-C RNAse domain Macro PF01661.21 NODE_46740_length_413_cov_96.140212_g38917_i0reverse_frame_1 - 8.5e-14 51.6 0.0 1.6e-13 50.7 0.0 1.4 1 0 0 1 1 1 1 Macro domain CX9C PF16860.5 NODE_46740_length_413_cov_96.140212_g38917_i0reverse_frame_1 - 0.0078 16.2 1.1 0.02 14.9 1.1 1.7 1 0 0 1 1 1 1 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Flp1_like PF16982.5 NODE_46740_length_413_cov_96.140212_g38917_i0reverse_frame_1 - 0.071 12.5 2.1 0.58 9.6 0.8 2.3 2 0 0 2 2 2 0 Putative Flagellin, Flp1-like, domain Baculo_LEF-11 PF06385.12 NODE_46740_length_413_cov_96.140212_g38917_i0reverse_frame_1 - 0.1 13.1 3.3 0.85 10.2 0.6 2.2 1 1 1 2 2 2 0 Baculovirus LEF-11 protein Rep_fac_C PF08542.11 NODE_46737_length_413_cov_104.510582_g38914_i0forward_frame_1 - 0.013 15.9 0.0 0.023 15.1 0.0 1.4 1 0 0 1 1 1 0 Replication factor C C-terminal domain RIX1 PF08167.12 NODE_46731_length_413_cov_111.841270_g38908_i0forward_frame_1 - 0.014 15.1 0.5 0.019 14.7 0.5 1.2 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis DUF2997 PF11211.8 NODE_46731_length_413_cov_111.841270_g38908_i0forward_frame_1 - 0.2 11.5 0.2 0.34 10.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) TIP41 PF04176.13 NODE_46731_length_413_cov_111.841270_g38908_i0forward_frame_1 - 0.34 10.4 1.3 0.43 10.0 1.3 1.2 1 0 0 1 1 1 0 TIP41-like family DUF3426 PF11906.8 NODE_46728_length_413_cov_116.185185_g38905_i0forward_frame_1 - 0.0014 18.8 0.0 0.0018 18.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3426) DUF4270 PF14092.6 NODE_46720_length_413_cov_154.650794_g29356_i1reverse_frame_1 - 0.13 11.3 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4270) TEX12 PF15219.6 NODE_46717_length_413_cov_160.047619_g38895_i0forward_frame_1 - 0.012 15.9 0.0 0.016 15.5 0.0 1.3 1 0 0 1 1 1 0 Testis-expressed 12 Gly-zipper_Omp PF13488.6 NODE_46706_length_413_cov_357.841270_g38884_i0forward_frame_1 - 0.18 11.8 7.4 0.12 12.4 3.0 2.3 2 0 0 2 2 2 0 Glycine zipper Pam16 PF03656.13 NODE_46706_length_413_cov_357.841270_g38884_i0forward_frame_1 - 0.35 10.9 1.5 0.54 10.3 1.5 1.3 1 0 0 1 1 1 0 Pam16 Ras PF00071.22 NODE_46704_length_413_cov_398.230159_g38882_i0reverse_frame_1 - 4e-15 55.8 0.0 5.9e-15 55.2 0.0 1.2 1 0 0 1 1 1 1 Ras family Acyl-CoA_ox_N PF14749.6 NODE_46690_length_414_cov_1.915567_g38871_i0reverse_frame_1 - 1.6e-17 64.3 0.0 1.8e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Acyl-CoA_dh_N PF02771.16 NODE_46690_length_414_cov_1.915567_g38871_i0reverse_frame_1 - 0.0014 19.3 0.0 0.0021 18.7 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain DUF772 PF05598.11 NODE_46688_length_414_cov_2.029024_g38869_i0forward_frame_1 - 0.14 12.2 0.4 0.26 11.3 0.0 1.7 2 0 0 2 2 2 0 Transposase domain (DUF772) DUF3418 PF11898.8 NODE_46687_length_414_cov_2.100264_g38868_i0forward_frame_1 - 5.8e-32 111.1 0.0 6.3e-32 111.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) ParE_toxin PF05016.15 NODE_46687_length_414_cov_2.100264_g38868_i0forward_frame_1 - 0.041 14.5 0.3 0.2 12.3 0.1 2.0 2 0 0 2 2 2 0 ParE toxin of type II toxin-antitoxin system, parDE SlyX PF04102.12 NODE_46687_length_414_cov_2.100264_g38868_i0forward_frame_1 - 0.11 13.2 0.2 0.29 11.8 0.0 1.7 2 0 0 2 2 2 0 SlyX Terminase_4 PF05119.12 NODE_46686_length_414_cov_2.253298_g38867_i0reverse_frame_1 - 0.12 12.8 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 Phage terminase, small subunit MraZ PF02381.18 NODE_46686_length_414_cov_2.253298_g38867_i0reverse_frame_1 - 0.18 11.8 0.5 0.32 11.0 0.0 1.6 2 0 0 2 2 2 0 MraZ protein, putative antitoxin-like Fer4_15 PF13459.6 NODE_46682_length_414_cov_2.696570_g38863_i0forward_frame_1 - 0.35 11.7 3.6 2.7 8.8 0.0 2.9 3 0 0 3 3 3 0 4Fe-4S single cluster domain Macro PF01661.21 NODE_46681_length_414_cov_2.704485_g38862_i0reverse_frame_1 - 1.2e-09 38.3 0.1 1.5e-09 37.9 0.1 1.1 1 0 0 1 1 1 1 Macro domain Ins_beta PF03488.14 NODE_46681_length_414_cov_2.704485_g38862_i0reverse_frame_1 - 0.066 13.2 0.1 1.9 8.6 0.0 2.5 3 0 0 3 3 3 0 Nematode insulin-related peptide beta type Popeye PF04831.13 NODE_46681_length_414_cov_2.704485_g38862_i0forward_frame_1 - 1.4 9.1 13.1 0.27 11.4 7.6 2.0 2 0 0 2 2 2 0 Popeye protein conserved region tRNA_anti-codon PF01336.25 NODE_46678_length_414_cov_3.058047_g38859_i0forward_frame_1 - 2.6e-16 59.3 0.0 3.7e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2 PF00152.20 NODE_46678_length_414_cov_3.058047_g38859_i0forward_frame_1 - 0.038 13.1 0.1 0.048 12.7 0.1 1.1 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) PP2C PF00481.21 NODE_46674_length_414_cov_11.403694_g38855_i0forward_frame_1 - 0.0011 18.7 0.2 0.002 17.8 0.1 1.5 1 1 1 2 2 2 1 Protein phosphatase 2C Tenui_NCP PF04876.12 NODE_46674_length_414_cov_11.403694_g38855_i0forward_frame_1 - 0.014 15.0 0.9 0.45 10.1 0.1 2.2 1 1 1 2 2 2 0 Tenuivirus major non-capsid protein DUF4298 PF14131.6 NODE_46674_length_414_cov_11.403694_g38855_i0forward_frame_1 - 0.027 14.4 0.2 0.32 11.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) DUF5423 PF17461.2 NODE_46668_length_414_cov_71.266491_g38849_i0reverse_frame_1 - 0.0015 17.5 0.0 0.0018 17.2 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5423) Cg6151-P PF10233.9 NODE_46660_length_414_cov_96.002639_g38842_i0reverse_frame_1 - 0.023 15.0 6.1 0.091 13.1 0.0 2.3 2 1 1 3 3 3 0 Uncharacterized conserved protein CG6151-P TMEM173 PF15009.6 NODE_46660_length_414_cov_96.002639_g38842_i0reverse_frame_1 - 0.029 13.5 0.4 0.029 13.5 0.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 173 HPIP_like PF18524.1 NODE_46656_length_414_cov_134.591029_g38838_i0reverse_frame_1 - 0.13 12.0 0.1 0.23 11.2 0.1 1.3 1 0 0 1 1 1 0 High potential iron-sulfur protein like MT-A70 PF05063.14 NODE_46655_length_414_cov_136.535620_g38837_i0forward_frame_1 - 1.2e-17 64.3 0.0 1.5e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 MT-A70 DUF1664 PF07889.12 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.0029 17.7 9.7 0.0035 17.4 8.8 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) G10 PF01125.17 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.038 13.7 2.3 0.047 13.5 2.3 1.3 1 0 0 1 1 1 0 G10 protein HAUS-augmin3 PF14932.6 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.085 12.4 9.2 0.1 12.1 9.2 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Laminin_II PF06009.12 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.087 12.8 5.8 0.069 13.2 4.4 1.5 1 1 0 1 1 1 0 Laminin Domain II HMMR_N PF15905.5 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.13 11.7 12.8 0.16 11.4 12.8 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF4200 PF13863.6 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.15 12.5 12.3 0.12 12.8 10.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) V_ATPase_I PF01496.19 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.3 9.0 6.6 0.32 8.9 6.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Prominin PF05478.11 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.36 8.7 7.3 0.43 8.5 7.3 1.1 1 0 0 1 1 1 0 Prominin Jnk-SapK_ap_N PF09744.9 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.39 10.9 13.6 1.7 8.9 9.4 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 LMBR1 PF04791.16 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.5 9.2 6.3 0.49 9.2 6.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF3450 PF11932.8 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.53 9.5 8.8 0.67 9.2 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ZYG-11_interact PF05884.12 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.67 9.3 2.2 0.75 9.2 2.2 1.1 1 0 0 1 1 1 0 Interactor of ZYG-11 PRCC PF10253.9 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.69 10.7 5.6 0.86 10.4 5.6 1.1 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting Cep57_CLD_2 PF14197.6 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 0.86 9.7 8.9 2.8 8.1 0.7 2.7 2 1 0 3 3 3 0 Centrosome localisation domain of PPC89 DUF4407 PF14362.6 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 1.5 8.1 5.1 1.7 7.9 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 2.2 7.5 8.6 2.5 7.2 8.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein Cgr1 PF03879.14 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 2.7 8.4 10.6 1.7 9.0 8.0 1.8 1 1 1 2 2 2 0 Cgr1 family bZIP_1 PF00170.21 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 5.6 7.1 9.3 1.1 9.4 3.0 2.7 2 1 1 3 3 3 0 bZIP transcription factor DUF948 PF06103.11 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_1 - 7.8 6.8 6.0 22 5.4 6.0 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Ribosomal_S14 PF00253.21 NODE_46638_length_414_cov_3151.435356_g38821_i0forward_frame_1 - 1.5e-11 43.9 4.0 7.1e-11 41.7 1.4 2.2 1 1 1 2 2 2 2 Ribosomal protein S14p/S29e TMEM132D_C PF15706.5 NODE_46637_length_415_cov_1.321053_g38820_i0reverse_frame_2 - 4.6 7.1 5.5 2.7 7.8 2.4 2.0 1 1 1 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term LRR19-TM PF15176.6 NODE_46637_length_415_cov_1.321053_g38820_i0forward_frame_2 - 0.026 14.5 0.4 0.048 13.7 0.4 1.4 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain U62_UL91 PF17442.2 NODE_46636_length_415_cov_1.768421_g38819_i0reverse_frame_2 - 0.14 12.2 0.3 0.52 10.3 0.1 1.9 2 0 0 2 2 2 0 Functional domain of U62 and UL91 proteins DUF2070 PF09843.9 NODE_46633_length_415_cov_2.123684_g38816_i0forward_frame_2 - 2.6 6.2 5.5 2.9 6.1 5.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DHHC PF01529.20 NODE_46633_length_415_cov_2.123684_g38816_i0forward_frame_2 - 3.7 7.7 11.4 0.89 9.7 6.1 1.9 2 0 0 2 2 2 0 DHHC palmitoyltransferase Microvir_J PF04726.13 NODE_46630_length_415_cov_2.450000_g38813_i0reverse_frame_3 - 1.2 9.1 6.3 13 5.9 0.3 2.5 2 0 0 2 2 2 0 Microvirus J protein Orthopox_A36R PF05950.11 NODE_46622_length_415_cov_2.805263_g38805_i0forward_frame_3 - 0.02 15.0 1.3 0.027 14.6 1.3 1.3 1 0 0 1 1 1 0 Orthopoxvirus A36R protein Pox_mRNA-cap PF03341.13 NODE_46616_length_415_cov_3.360526_g38799_i0forward_frame_3 - 0.0015 17.9 0.1 0.002 17.5 0.1 1.2 1 0 0 1 1 1 1 Poxvirus mRNA capping enzyme, small subunit DUF3341 PF11821.8 NODE_46616_length_415_cov_3.360526_g38799_i0forward_frame_3 - 0.1 12.3 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) Aminotran_1_2 PF00155.21 NODE_46613_length_415_cov_4.226316_g38796_i0forward_frame_3 - 5.6e-22 78.4 0.0 6.7e-22 78.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PTPRCAP PF15713.5 NODE_46609_length_415_cov_60.021053_g38792_i0forward_frame_3 - 0.019 15.2 10.2 0.021 15.1 10.2 1.1 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated CobT PF06213.12 NODE_46609_length_415_cov_60.021053_g38792_i0forward_frame_3 - 8.3 5.7 17.6 42 3.4 0.0 2.0 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT DUF4215 PF13948.6 NODE_46608_length_415_cov_60.207895_g38791_i0reverse_frame_2 - 7.9e-06 26.2 10.2 7.9e-06 26.2 10.2 2.5 2 1 0 2 2 2 1 Domain of unknown function (DUF4215) TyeA PF09059.10 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 2.1e-05 24.5 0.4 0.28 11.3 0.0 2.4 2 1 0 2 2 2 2 TyeA Barstar PF01337.18 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 0.00018 21.4 0.5 0.014 15.4 0.0 2.8 1 1 1 3 3 3 1 Barstar (barnase inhibitor) Ribosomal_S8 PF00410.19 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 0.002 18.0 0.1 0.11 12.5 0.0 2.1 1 1 1 2 2 2 2 Ribosomal protein S8 FANCI_HD1 PF14679.6 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 0.0024 17.8 0.2 1.2 9.1 0.0 2.6 1 1 1 2 2 2 2 FANCI helical domain 1 DUF2913 PF11140.8 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 0.0042 16.9 0.2 0.0048 16.7 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2913) Vac14_Fig4_bd PF11916.8 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 0.013 15.1 0.5 4.5 6.9 0.1 2.8 1 1 2 3 3 3 0 Vacuolar protein 14 C-terminal Fig4p binding DUF3774 PF12609.8 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 0.018 16.0 1.6 0.97 10.5 0.3 2.6 1 1 2 3 3 3 0 Wound-induced protein SEN1_N PF12726.7 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 0.026 12.8 0.3 0.039 12.2 0.2 1.3 1 1 0 1 1 1 0 SEN1 N terminal FliL PF03748.14 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 0.03 14.9 0.4 1.3 9.6 0.0 2.1 1 1 1 2 2 2 0 Flagellar basal body-associated protein FliL IFN-gamma PF00714.17 NODE_46607_length_415_cov_67.094737_g38790_i0reverse_frame_2 - 0.079 12.8 0.5 1.7 8.5 0.1 2.1 1 1 1 2 2 2 0 Interferon gamma RNaseH_like PF04308.12 NODE_46607_length_415_cov_67.094737_g38790_i0forward_frame_2 - 0.016 15.2 0.2 5 7.0 0.0 2.2 2 0 0 2 2 2 0 Ribonuclease H-like Serpulina_VSP PF05540.11 NODE_46605_length_415_cov_69.281579_g38788_i0reverse_frame_3 - 0.025 13.6 1.0 0.029 13.4 1.0 1.2 1 0 0 1 1 1 0 Serpulina hyodysenteriae variable surface protein Ydc2-catalyt PF09159.10 NODE_46605_length_415_cov_69.281579_g38788_i0reverse_frame_2 - 0.042 13.6 0.4 0.11 12.3 0.0 1.7 2 0 0 2 2 2 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 Rrn6 PF10214.9 NODE_46599_length_415_cov_83.939474_g38782_i0forward_frame_2 - 1.7 7.0 18.3 2 6.8 18.3 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor SR-25 PF10500.9 NODE_46599_length_415_cov_83.939474_g38782_i0forward_frame_2 - 8.6 5.9 25.3 19 4.7 24.9 1.7 1 1 0 1 1 1 0 Nuclear RNA-splicing-associated protein GH3 PF03321.13 NODE_46595_length_415_cov_86.086842_g38778_i0forward_frame_2 - 5.6e-25 88.2 0.0 6.6e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 GH3 auxin-responsive promoter TMIE PF16038.5 NODE_46594_length_415_cov_86.381579_g38777_i0reverse_frame_3 - 1 9.2 4.6 2 8.3 4.6 1.4 1 0 0 1 1 1 0 TMIE protein BCMA-Tall_bind PF09257.10 NODE_46593_length_415_cov_86.942105_g38776_i0forward_frame_3 - 4.2 7.6 9.8 13 5.9 2.5 3.1 3 0 0 3 3 3 0 BCMA, TALL-1 binding PTPLA PF04387.14 NODE_46590_length_415_cov_89.652632_g38773_i0forward_frame_2 - 0.13 11.9 1.5 0.18 11.6 1.5 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA TP53IP5 PF15331.6 NODE_46589_length_415_cov_98.142105_g38772_i0forward_frame_3 - 0.0036 17.5 0.2 0.0036 17.5 0.2 1.8 1 1 1 2 2 2 1 Cellular tumour antigen p53-inducible 5 PCIF1_WW PF12237.8 NODE_46589_length_415_cov_98.142105_g38772_i0forward_frame_2 - 1.8e-06 27.7 0.0 2.2e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Phosphorylated CTD interacting factor 1 WW domain Ntox34 PF15606.6 NODE_46586_length_415_cov_104.489474_g38769_i0reverse_frame_3 - 0.031 14.4 0.0 0.042 14.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial toxin 34 FUSC PF04632.12 NODE_46586_length_415_cov_104.489474_g38769_i0reverse_frame_3 - 0.17 10.4 1.8 0.15 10.5 1.8 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family RCC1_2 PF13540.6 NODE_46586_length_415_cov_104.489474_g38769_i0forward_frame_2 - 0.00038 20.2 1.7 0.52 10.2 0.2 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Olduvai PF06758.13 NODE_46583_length_415_cov_119.578947_g38766_i0reverse_frame_2 - 0.025 14.8 0.6 0.04 14.2 0.6 1.3 1 0 0 1 1 1 0 Olduvai domain Transglut_core3 PF13471.6 NODE_46583_length_415_cov_119.578947_g38766_i0forward_frame_3 - 0.015 15.2 0.7 0.022 14.6 0.7 1.3 1 0 0 1 1 1 0 Transglutaminase-like superfamily DUF2931 PF11153.8 NODE_46583_length_415_cov_119.578947_g38766_i0forward_frame_2 - 0.041 13.6 0.0 0.045 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) RCC1_2 PF13540.6 NODE_46581_length_415_cov_127.581579_g30845_i1forward_frame_2 - 1.9e-05 24.3 10.5 0.075 12.8 0.1 4.3 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_46581_length_415_cov_127.581579_g30845_i1forward_frame_2 - 0.02 15.0 1.0 16 5.6 0.0 3.0 2 1 1 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Lipocalin_7 PF14651.6 NODE_46581_length_415_cov_127.581579_g30845_i1forward_frame_2 - 1.2 9.1 3.9 5.3 7.0 0.6 2.6 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family RyR PF02026.16 NODE_46579_length_415_cov_139.786842_g38763_i0forward_frame_3 - 0.18 12.0 0.0 0.25 11.5 0.0 1.1 1 0 0 1 1 1 0 RyR domain DEAD PF00270.29 NODE_46578_length_415_cov_141.815789_g38762_i0reverse_frame_2 - 2.2e-13 50.3 0.6 2.7e-13 50.1 0.6 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 NODE_46578_length_415_cov_141.815789_g38762_i0reverse_frame_2 - 0.00016 21.8 0.2 0.00018 21.6 0.2 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF4079 PF13301.6 NODE_46576_length_415_cov_148.442105_g38760_i0forward_frame_3 - 0.2 11.8 0.7 6.6 6.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) DUF494 PF04361.13 NODE_46576_length_415_cov_148.442105_g38760_i0forward_frame_2 - 0.17 11.8 0.1 0.25 11.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF494) Glyoxalase PF00903.25 NODE_46575_length_415_cov_153.144737_g38759_i0reverse_frame_2 - 2.2e-08 34.4 0.0 2.8e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EAP30 PF04157.16 NODE_46575_length_415_cov_153.144737_g38759_i0reverse_frame_2 - 0.047 13.0 0.0 0.061 12.6 0.0 1.3 1 1 0 1 1 1 0 EAP30/Vps36 family DUF3325 PF11804.8 NODE_46572_length_415_cov_254.702632_g38756_i0forward_frame_3 - 0.45 10.7 10.3 0.16 12.2 1.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3325) ZapB PF06005.12 NODE_46568_length_415_cov_697.181579_g38752_i0reverse_frame_3 - 0.0046 17.4 5.4 0.0095 16.4 5.4 1.6 1 0 0 1 1 1 1 Cell division protein ZapB DUF1465 PF07323.12 NODE_46568_length_415_cov_697.181579_g38752_i0reverse_frame_3 - 0.034 14.0 0.7 0.043 13.7 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Phage_sheath_1C PF17482.2 NODE_46568_length_415_cov_697.181579_g38752_i0reverse_frame_3 - 0.038 14.0 1.7 1.1 9.2 0.5 2.2 2 1 0 2 2 2 0 Phage tail sheath C-terminal domain Osmo_CC PF08946.10 NODE_46568_length_415_cov_697.181579_g38752_i0reverse_frame_3 - 0.2 11.9 5.1 0.66 10.3 0.2 2.3 2 0 0 2 2 2 0 Osmosensory transporter coiled coil Deltaretro_Tax PF05599.11 NODE_46568_length_415_cov_697.181579_g38752_i0forward_frame_2 - 0.0068 16.9 0.0 0.013 16.0 0.0 1.4 1 0 0 1 1 1 1 Deltaretrovirus Tax protein Peptidase_M43 PF05572.13 NODE_46567_length_415_cov_1031.668421_g38751_i0forward_frame_3 - 0.14 12.0 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Pregnancy-associated plasma protein-A BAH PF01426.18 NODE_46561_length_416_cov_1.272966_g38746_i0reverse_frame_3 - 0.27 11.1 1.0 0.42 10.5 0.7 1.4 1 1 0 1 1 1 0 BAH domain zf-RING_13 PF17977.1 NODE_46558_length_416_cov_2.031496_g38743_i0reverse_frame_3 - 0.96 9.6 5.0 1.2 9.3 3.7 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain YebF PF13995.6 NODE_46552_length_416_cov_2.435696_g38737_i0reverse_frame_3 - 1e-40 137.7 0.6 1.2e-40 137.4 0.6 1.1 1 0 0 1 1 1 1 YebF-like protein Zmiz1_N PF18028.1 NODE_46546_length_416_cov_2.787402_g38731_i0reverse_frame_3 - 0.099 13.0 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Zmiz1 N-terminal tetratricopeptide repeat domain Transpeptidase PF00905.22 NODE_46541_length_416_cov_3.068241_g38726_i0reverse_frame_3 - 0.02 14.1 0.0 0.026 13.7 0.0 1.1 1 0 0 1 1 1 0 Penicillin binding protein transpeptidase domain Glyco_hydro_38N PF01074.22 NODE_46541_length_416_cov_3.068241_g38726_i0reverse_frame_2 - 2.1e-12 47.0 0.2 2.8e-12 46.6 0.2 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Bunya_NS-S PF01104.17 NODE_46538_length_416_cov_3.296588_g38723_i0reverse_frame_3 - 0.03 14.2 0.9 0.044 13.6 0.6 1.4 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s PaO PF08417.12 NODE_46538_length_416_cov_3.296588_g38723_i0forward_frame_2 - 0.097 12.8 0.2 0.16 12.1 0.2 1.4 1 0 0 1 1 1 0 Pheophorbide a oxygenase Phage_clamp_A PF16790.5 NODE_46528_length_416_cov_50.816273_g38713_i0forward_frame_2 - 0.016 15.7 0.3 0.023 15.2 0.3 1.2 1 0 0 1 1 1 0 Bacteriophage clamp loader A subunit Phage_holin_3_1 PF05106.12 NODE_46527_length_416_cov_54.889764_g38712_i0forward_frame_2 - 0.051 14.0 0.2 0.095 13.1 0.2 1.5 1 0 0 1 1 1 0 Phage holin family (Lysis protein S) ETRAMP PF09716.10 NODE_46526_length_416_cov_55.635171_g38711_i0forward_frame_3 - 0.022 14.8 5.2 0.048 13.7 5.2 1.6 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Phage_Integr_2 PF13009.6 NODE_46522_length_416_cov_63.811024_g38707_i0reverse_frame_2 - 0.0039 16.3 0.3 0.0049 16.0 0.3 1.1 1 0 0 1 1 1 1 Putative phage integrase Exo_endo_phos_2 PF14529.6 NODE_46522_length_416_cov_63.811024_g38707_i0reverse_frame_2 - 0.025 14.4 0.8 0.068 13.0 0.6 1.7 1 1 1 2 2 2 0 Endonuclease-reverse transcriptase APA3_viroporin PF11289.8 NODE_46522_length_416_cov_63.811024_g38707_i0forward_frame_2 - 3.4 7.2 10.3 4 6.9 10.3 1.2 1 0 0 1 1 1 0 Coronavirus accessory protein 3a DTW PF03942.15 NODE_46517_length_416_cov_81.183727_g38702_i0reverse_frame_3 - 8e-11 42.0 0.0 1.2e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 DTW domain REC104 PF17378.2 NODE_46508_length_416_cov_139.443570_g38693_i0reverse_frame_2 - 0.0019 18.0 0.8 0.0023 17.8 0.8 1.1 1 0 0 1 1 1 1 Meiotic recombination protein REC104 CCER1 PF15482.6 NODE_46508_length_416_cov_139.443570_g38693_i0forward_frame_3 - 4 7.3 4.5 5.5 6.8 4.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 4F5 PF04419.14 NODE_46505_length_416_cov_173.506562_g38690_i0forward_frame_3 - 0.13 13.2 6.4 0.23 12.4 6.4 1.4 1 0 0 1 1 1 0 4F5 protein family Adeno_E4_34 PF04528.13 NODE_46503_length_416_cov_191.530184_g38688_i0reverse_frame_2 - 0.066 13.1 0.8 0.097 12.5 0.8 1.2 1 0 0 1 1 1 0 Adenovirus early E4 34 kDa protein conserved region MauJ PF17419.2 NODE_46487_length_417_cov_1.853403_g38673_i0reverse_frame_3 - 0.071 12.6 0.0 0.099 12.1 0.0 1.2 1 0 0 1 1 1 0 Methylamine utilization protein MauJ Pro_sub2 PF18513.1 NODE_46487_length_417_cov_1.853403_g38673_i0reverse_frame_3 - 0.49 10.6 9.4 0.21 11.8 3.9 2.3 1 1 1 2 2 2 0 Prodomain subtilisin 2 ESAG1 PF03238.13 NODE_46486_length_417_cov_1.856021_g38672_i0reverse_frame_2 - 0.1 12.0 1.7 0.13 11.7 1.7 1.3 1 0 0 1 1 1 0 ESAG protein DUF5418 PF17439.2 NODE_46482_length_417_cov_2.198953_g38668_i0forward_frame_3 - 0.93 9.6 10.3 1.1 9.3 10.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5418) Furin-like_2 PF15913.5 NODE_46479_length_417_cov_2.793194_g38665_i0reverse_frame_2 - 0.001 19.2 1.2 0.11 12.6 0.2 2.1 2 0 0 2 2 2 2 Furin-like repeat, cysteine-rich IF3_C PF00707.22 NODE_46476_length_417_cov_3.591623_g38662_i0reverse_frame_3 - 0.092 12.7 1.1 0.14 12.1 1.1 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain Lamprin PF06403.11 NODE_46475_length_417_cov_3.772251_g38661_i0forward_frame_3 - 1.2 9.1 16.1 0.98 9.4 3.1 2.3 1 1 1 2 2 2 0 Lamprin Reticulon PF02453.17 NODE_46469_length_417_cov_35.272251_g38656_i0forward_frame_2 - 0.026 14.5 2.2 0.031 14.2 2.2 1.1 1 0 0 1 1 1 0 Reticulon Lyase_8 PF02278.18 NODE_46469_length_417_cov_35.272251_g38656_i0forward_frame_2 - 0.071 12.6 0.4 0.094 12.2 0.4 1.3 1 1 0 1 1 1 0 Polysaccharide lyase family 8, super-sandwich domain Glyco_hydro_42 PF02449.15 NODE_46466_length_417_cov_46.636126_g38653_i0forward_frame_2 - 0.038 13.3 0.3 0.05 12.9 0.1 1.4 2 0 0 2 2 2 0 Beta-galactosidase Paz_1 PF18349.1 NODE_46460_length_417_cov_66.992147_g38647_i0reverse_frame_2 - 0.11 12.5 1.8 0.32 11.0 0.1 2.3 1 1 0 2 2 2 0 PAZ domain DUF3169 PF11368.8 NODE_46458_length_417_cov_73.486911_g38645_i0reverse_frame_3 - 0.15 11.5 2.4 0.24 10.9 2.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) Sipho_Gp157 PF05565.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.00027 21.0 3.0 0.00027 21.0 3.0 2.1 1 1 1 2 2 2 1 Siphovirus Gp157 APG6_N PF17675.1 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.00048 20.6 4.0 0.00048 20.6 4.0 1.8 1 1 1 2 2 2 1 Apg6 coiled-coil region DUF2968 PF11180.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0015 18.2 0.7 0.0015 18.2 0.7 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF2968) She9_MDM33 PF05546.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0017 18.2 4.4 0.0017 18.2 4.4 1.5 1 1 0 1 1 1 1 She9 / Mdm33 family DUF3450 PF11932.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0025 17.1 4.0 0.0025 17.1 4.0 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) TMF_TATA_bd PF12325.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0051 17.0 3.6 0.0051 17.0 3.6 2.2 1 1 0 2 2 2 1 TATA element modulatory factor 1 TATA binding Wtap PF17098.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0058 16.6 6.9 0.035 14.0 6.9 1.9 1 1 0 1 1 1 1 WTAP/Mum2p family GAS PF13851.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0062 15.9 11.3 0.0062 15.9 11.3 2.2 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding CortBP2 PF09727.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.0073 16.2 3.5 0.0073 16.2 3.5 2.0 1 1 1 2 2 2 1 Cortactin-binding protein-2 DUF4164 PF13747.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.011 16.0 2.1 0.014 15.7 0.8 1.9 2 1 0 2 2 1 0 Domain of unknown function (DUF4164) BRE1 PF08647.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.012 15.6 10.5 0.012 15.6 10.5 1.8 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase PKcGMP_CC PF16808.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.014 15.2 1.1 1.3 8.9 0.0 3.0 2 1 1 3 3 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase ADIP PF11559.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.017 15.3 8.8 0.017 15.3 8.8 2.4 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding HMMR_N PF15905.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.018 14.5 16.0 0.021 14.3 16.0 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal BST2 PF16716.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.02 15.5 6.1 0.02 15.5 6.1 2.1 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 TMF_DNA_bd PF12329.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.029 14.4 10.0 0.029 14.4 10.0 3.1 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding Fungal_TACC PF12709.7 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.03 14.8 13.1 0.11 12.9 0.9 3.0 1 1 2 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins AAA_13 PF13166.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.031 13.0 11.5 0.038 12.6 11.5 1.2 1 0 0 1 1 1 0 AAA domain TolA_bind_tri PF16331.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.039 14.0 1.2 0.039 14.0 1.2 2.7 2 1 1 3 3 3 0 TolA binding protein trimerisation SlyX PF04102.12 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.055 14.1 0.7 0.055 14.1 0.7 2.4 1 1 0 2 2 2 0 SlyX Spc7 PF08317.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.061 12.2 12.6 0.083 11.8 12.6 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein V_ATPase_I PF01496.19 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.063 11.2 7.3 0.07 11.0 7.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HycH PF07450.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.066 13.6 1.0 0.094 13.1 0.6 1.5 1 1 0 1 1 1 0 Formate hydrogenlyase maturation protein HycH Prefoldin_2 PF01920.20 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.075 13.0 15.4 0.09 12.7 5.8 2.4 1 1 1 2 2 2 0 Prefoldin subunit TRAF_BIRC3_bd PF16673.5 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.077 12.8 2.5 0.2 11.4 2.5 1.7 1 0 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain QRPTase_C PF01729.19 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.08 12.7 0.6 0.13 12.0 0.3 1.4 1 1 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain KxDL PF10241.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.093 13.0 8.9 0.23 11.8 1.2 2.4 1 1 1 2 2 2 0 Uncharacterized conserved protein CENP-F_leu_zip PF10473.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.11 12.5 12.9 0.064 13.3 10.3 1.9 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1664 PF07889.12 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.14 12.2 7.3 0.21 11.6 7.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2730 PF10805.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.17 12.0 3.1 2.1 8.5 0.1 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF2730) Atg14 PF10186.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.18 10.9 10.4 0.21 10.6 10.2 1.2 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc42p PF11544.8 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.24 11.4 14.4 0.11 12.5 5.6 2.4 2 0 0 2 2 2 0 Spindle pole body component Spc42p DUF641 PF04859.12 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.28 11.5 7.1 1.4 9.3 7.1 2.3 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) bZIP_1 PF00170.21 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.31 11.2 16.4 0.12 12.4 5.3 3.0 1 1 3 4 4 4 0 bZIP transcription factor DUF948 PF06103.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.33 11.2 4.6 1 9.6 4.5 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF4200 PF13863.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.38 11.2 13.3 2.3 8.6 12.8 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) TMPIT PF07851.13 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.56 9.4 9.5 0.47 9.7 8.4 1.5 1 1 0 1 1 1 0 TMPIT-like protein DUF2207 PF09972.9 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.75 8.5 8.5 0.95 8.2 8.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4407 PF14362.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 0.79 9.0 6.5 1.1 8.6 6.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GrpE PF01025.19 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 1.1 9.0 13.8 2.6 7.7 6.3 2.2 1 1 1 2 2 2 0 GrpE Herpes_UL6 PF01763.16 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 1.2 7.6 10.8 2.8 6.4 10.8 1.6 1 1 0 1 1 1 0 Herpesvirus UL6 like DivIC PF04977.15 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 2.2 8.1 14.1 2.8 7.8 4.8 3.3 1 1 2 3 3 3 0 Septum formation initiator FlaC_arch PF05377.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 2.4 8.6 9.8 6.1 7.3 2.2 2.9 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) YabA PF06156.13 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 3.2 8.5 11.9 0.32 11.7 5.5 2.3 1 1 2 3 3 3 0 Initiation control protein YabA DUF4446 PF14584.6 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 3.2 7.7 8.7 41 4.1 7.7 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) Csm1_N PF18504.1 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 4.1 7.8 16.3 3.6 8.0 3.0 3.6 1 1 2 3 3 3 0 Csm1 N-terminal domain UPF0242 PF06785.11 NODE_46458_length_417_cov_73.486911_g38645_i0forward_frame_3 - 5.4 7.1 15.4 0.45 10.6 7.0 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Peroxin-13_N PF04088.13 NODE_46454_length_417_cov_81.494764_g38641_i0forward_frame_2 - 0.043 14.1 0.3 0.084 13.1 0.2 1.6 1 1 1 2 2 2 0 Peroxin 13, N-terminal region Spc24 PF08286.11 NODE_46450_length_417_cov_84.916230_g38637_i0reverse_frame_2 - 0.024 14.9 0.9 0.04 14.2 0.9 1.4 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Alanine_zipper PF11839.8 NODE_46450_length_417_cov_84.916230_g38637_i0reverse_frame_2 - 0.19 12.1 17.8 0.078 13.4 14.5 2.0 2 0 0 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein Dsh_C PF12316.8 NODE_46450_length_417_cov_84.916230_g38637_i0reverse_frame_2 - 0.9 9.9 4.4 1.1 9.6 4.4 1.1 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal CNOT1_HEAT_N PF16419.5 NODE_46449_length_417_cov_85.740838_g38636_i0forward_frame_3 - 0.019 14.6 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat Rap_GAP PF02145.15 NODE_46449_length_417_cov_85.740838_g38636_i0forward_frame_2 - 0.14 11.7 2.4 0.16 11.5 2.4 1.1 1 0 0 1 1 1 0 Rap/ran-GAP PGG PF13962.6 NODE_46442_length_417_cov_102.052356_g38630_i0forward_frame_3 - 1.8 8.4 9.3 0.16 11.8 4.3 1.7 2 0 0 2 2 2 0 Domain of unknown function ETRAMP PF09716.10 NODE_46441_length_417_cov_103.162304_g38629_i0forward_frame_3 - 1.6 8.8 7.4 1.8 8.7 0.2 2.5 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) 2OG-FeII_Oxy_3 PF13640.6 NODE_46438_length_417_cov_125.272251_g38626_i0forward_frame_2 - 1.2e-13 51.8 0.0 1.5e-13 51.4 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 NODE_46438_length_417_cov_125.272251_g38626_i0forward_frame_2 - 4.5e-10 40.0 0.0 6.1e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 NODE_46438_length_417_cov_125.272251_g38626_i0forward_frame_2 - 0.071 13.6 0.0 0.087 13.3 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 NODE_46438_length_417_cov_125.272251_g38626_i0forward_frame_2 - 0.08 13.4 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase Ank_5 PF13857.6 NODE_46431_length_417_cov_171.829843_g38619_i0forward_frame_2 - 2.7e-06 27.5 0.1 0.00078 19.7 0.1 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_46431_length_417_cov_171.829843_g38619_i0forward_frame_2 - 3e-06 27.7 0.1 0.0043 17.6 0.1 2.4 2 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_46431_length_417_cov_171.829843_g38619_i0forward_frame_2 - 0.00015 22.3 0.2 0.018 15.6 0.0 1.7 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_46431_length_417_cov_171.829843_g38619_i0forward_frame_2 - 0.13 12.9 0.0 2.2 9.1 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks187.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks187.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks187.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks187.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Dynein_light PF01221.18 NODE_46420_length_417_cov_597.031414_g38609_i0reverse_frame_2 - 8.8e-23 80.4 2.1 1.2e-22 80.0 2.1 1.2 1 0 0 1 1 1 1 Dynein light chain type 1 LUC7 PF03194.15 NODE_46420_length_417_cov_597.031414_g38609_i0forward_frame_3 - 0.16 11.6 0.2 0.22 11.2 0.2 1.1 1 0 0 1 1 1 0 LUC7 N_terminus Penicil_amidase PF01804.18 ORF99 - 5.5e-06 25.6 0.0 6.7e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase SmpA_OmlA PF04355.13 ORF98469 - 6.5e-27 93.1 0.3 8.8e-27 92.7 0.3 1.2 1 0 0 1 1 1 1 SmpA / OmlA family Sulfolobus_pRN PF05584.11 ORF98469 - 0.096 12.7 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein Bys1 PF04681.12 ORF97553 - 0.11 12.5 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Blastomyces yeast-phase-specific protein Pestivirus_E2 PF16329.5 ORF97176 - 0.13 11.1 0.5 0.16 10.8 0.5 1.0 1 0 0 1 1 1 0 Pestivirus envelope glycoprotein E2 zf-C5HC2 PF02928.16 ORF96102 - 0.004 17.5 1.4 0.017 15.5 1.4 2.0 1 1 0 1 1 1 1 C5HC2 zinc finger NPP PF08384.10 ORF96102 - 0.031 14.3 2.1 11 6.1 0.1 3.2 3 0 0 3 3 3 0 Pro-opiomelanocortin, N-terminal region DUF1970 PF09301.10 ORF96102 - 0.17 12.1 2.4 0.35 11.2 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1970) amfpi-1 PF12190.8 ORF92250 - 0.46 11.1 4.1 0.94 10.1 4.1 1.5 1 0 0 1 1 1 0 Fungal protease inhibitor NuDC PF16273.5 ORF91428 - 0.048 14.2 0.2 0.18 12.3 0.0 1.8 2 0 0 2 2 2 0 Nuclear distribution C domain ArlS_N PF18719.1 ORF91065 - 0.0023 18.2 0.7 0.0038 17.4 0.7 1.4 1 0 0 1 1 1 1 ArlS sensor domain TRP PF06011.12 ORF91065 - 0.0066 15.2 0.8 0.0079 15.0 0.8 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel NS3_envE PF02723.14 ORF91065 - 0.033 14.3 5.3 0.033 14.3 5.3 1.7 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E Ribosomal_L36 PF00444.18 ORF91065 - 0.23 11.7 5.0 0.42 10.8 5.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L36 2TM PF13239.6 ORF91065 - 1.9 8.9 4.3 1.1 9.6 1.8 1.9 2 0 0 2 2 2 0 2TM domain HTH_3 PF01381.22 ORF89796 - 2.6e-07 30.6 0.0 4.8e-07 29.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HrpB2 PF09487.10 ORF89796 - 0.015 15.7 0.0 0.053 14.0 0.0 1.8 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB2) Histone_HNS PF00816.21 ORF89796 - 0.063 14.1 0.0 0.43 11.4 0.0 2.1 1 1 1 2 2 2 0 H-NS histone family Fis1_TPR_C PF14853.6 ORF89796 - 0.13 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat BetR PF08667.10 ORF89796 - 0.13 12.3 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 BetR domain UTRA PF07702.13 ORF89470 - 2.4e-26 92.3 0.0 2.8e-26 92.0 0.0 1.1 1 0 0 1 1 1 1 UTRA domain Ploopntkinase2 PF18747.1 ORF89470 - 0.024 13.9 0.0 0.031 13.6 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase2 zf-like PF04071.12 ORF89236 - 0.11 12.4 4.0 7 6.7 2.9 2.2 2 0 0 2 2 2 0 Cysteine-rich small domain MMM1 PF10296.9 ORF883 - 0.02 14.0 0.9 0.023 13.8 0.9 1.1 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Ly49 PF08391.10 ORF883 - 0.035 14.5 4.4 0.05 14.0 4.4 1.3 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region NS3_envE PF02723.14 ORF883 - 0.038 14.1 1.0 0.068 13.3 1.0 1.4 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E YMF19 PF02326.15 ORF883 - 0.11 13.3 1.5 0.16 12.8 1.4 1.5 1 1 0 1 1 1 0 Plant ATP synthase F0 Pilin_N PF07790.11 ORF883 - 0.12 13.3 0.1 0.18 12.7 0.1 1.4 1 0 0 1 1 1 0 Archaeal Type IV pilin, N-terminal DUF2976 PF11190.8 ORF883 - 0.17 11.7 0.9 6.5 6.6 0.4 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2976) DUF2065 PF09838.9 ORF87455 - 0.024 14.7 0.3 0.066 13.2 0.1 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) HCMV_UL124 PF17609.2 ORF87455 - 4.8 7.4 7.2 1.1 9.5 1.2 2.5 2 1 0 2 2 2 0 Family of unknown function YscO PF07321.12 ORF86965 - 0.092 12.7 2.9 0.13 12.2 2.9 1.2 1 1 0 1 1 1 0 Type III secretion protein YscO Amidase_5 PF05382.13 ORF85189 - 0.17 11.8 0.3 0.22 11.4 0.3 1.1 1 0 0 1 1 1 0 Bacteriophage peptidoglycan hydrolase AIG1 PF04548.16 ORF84101 - 0.033 13.5 0.0 0.04 13.2 0.0 1.1 1 0 0 1 1 1 0 AIG1 family APOBEC4 PF18775.1 ORF80080 - 1.4 9.1 7.7 1.3 9.3 0.2 2.8 2 1 2 4 4 4 0 APOBEC4 NAD_kinase PF01513.21 ORF74113 - 4.4e-33 114.7 1.3 5.4e-33 114.4 1.3 1.0 1 0 0 1 1 1 1 ATP-NAD kinase eIF-1a PF01176.19 ORF74113 - 0.041 13.7 0.0 0.12 12.2 0.0 1.8 1 1 0 1 1 1 0 Translation initiation factor 1A / IF-1 DUF4687 PF15747.5 ORF74113 - 0.05 14.1 1.7 3.2 8.2 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4687) Bombinin PF05298.11 ORF71356 - 0.028 14.1 0.0 0.036 13.7 0.0 1.3 1 0 0 1 1 1 0 Bombinin GTP_cyclohydro2 PF00925.20 ORF71356 - 0.033 13.8 0.0 0.042 13.4 0.0 1.2 1 0 0 1 1 1 0 GTP cyclohydrolase II IreB PF06135.12 ORF71356 - 1.1 9.5 4.0 9.6 6.5 0.1 2.7 2 1 1 3 3 3 0 IreB regulatory phosphoprotein DUF5563 PF17718.1 ORF71191 - 1.2 8.7 4.2 1.5 8.3 4.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5563) DUF3039 PF11238.8 ORF70242 - 0.045 13.5 1.7 0.25 11.1 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) PsbL PF02419.17 ORF69914 - 2.4e-18 65.8 0.9 3.8e-18 65.2 0.9 1.3 1 0 0 1 1 1 1 PsbL protein DUF1993 PF09351.10 ORF65217 - 0.14 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) TFIIE-A_C PF11521.8 ORF63108 - 1.3e-05 25.4 4.5 2.1e-05 24.7 3.8 1.8 1 1 1 2 2 2 1 C-terminal general transcription factor TFIIE alpha INO80_Ies4 PF08193.11 ORF63108 - 0.021 14.9 0.4 0.023 14.7 0.4 1.1 1 0 0 1 1 1 0 INO80 complex subunit Ies4 LptF_LptG PF03739.14 ORF61057 - 0.01 14.7 0.5 0.015 14.2 0.5 1.2 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG DUF2207 PF09972.9 ORF60275 - 0.031 13.1 0.4 0.037 12.8 0.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) SWIM PF04434.17 ORF5782 - 0.077 12.7 4.7 2.1 8.1 0.0 3.2 3 0 0 3 3 3 0 SWIM zinc finger MIG-14_Wnt-bd PF06664.12 ORF56923 - 0.008 15.4 10.8 0.011 15.0 10.8 1.1 1 0 0 1 1 1 1 Wnt-binding factor required for Wnt secretion Ninjurin PF04923.12 ORF56923 - 6.5 6.8 12.1 1.7e+02 2.2 12.1 2.1 1 1 0 1 1 1 0 Ninjurin Guanylin PF02058.15 ORF56444 - 0.36 11.3 2.5 7.7 7.1 0.2 2.4 1 1 2 3 3 3 0 Guanylin precursor DUF4118 PF13493.6 ORF55780 - 2.4 8.0 8.7 1.7 8.4 0.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4118) RloB PF13707.6 ORF52760 - 0.043 14.0 0.2 0.056 13.6 0.2 1.2 1 0 0 1 1 1 0 RloB-like protein DHquinase_II PF01220.19 ORF52760 - 0.055 13.1 0.6 0.27 10.9 0.3 1.9 1 1 1 2 2 2 0 Dehydroquinase class II Ly-6_related PF06579.12 ORF52454 - 0.2 11.9 4.3 0.37 11.0 1.9 2.3 2 1 1 3 3 3 0 Caenorhabditis elegans ly-6-related protein DUF1724 PF08350.10 ORF5197 - 0.1 12.8 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1724) RloB PF13707.6 ORF5097 - 0.043 14.0 0.2 0.056 13.6 0.2 1.2 1 0 0 1 1 1 0 RloB-like protein DHquinase_II PF01220.19 ORF5097 - 0.075 12.7 0.4 0.26 10.9 0.3 1.8 1 1 1 2 2 2 0 Dehydroquinase class II Ank_2 PF12796.7 ORF49335 - 3.3e-11 43.6 0.0 9.5e-11 42.1 0.0 1.8 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF49335 - 1.4e-10 41.2 1.0 9.3e-07 29.0 0.1 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF49335 - 1.1e-08 35.1 7.7 7.4e-05 23.0 0.2 3.6 4 1 1 5 5 5 2 Ankyrin repeat Ank_3 PF13606.6 ORF49335 - 1.5e-08 34.2 0.6 0.00036 20.7 0.0 3.7 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF49335 - 2.8e-08 34.1 0.2 1.5e-07 31.8 0.1 2.1 1 1 1 2 2 2 1 Ankyrin repeats (many copies) GMC_oxred_N PF00732.19 ORF48713 - 0.037 13.4 0.3 0.042 13.2 0.3 1.1 1 0 0 1 1 1 0 GMC oxidoreductase RFX_DNA_binding PF02257.15 ORF48181 - 0.099 13.3 0.0 0.18 12.5 0.0 1.4 1 0 0 1 1 1 0 RFX DNA-binding domain RraB PF06877.11 ORF47536 - 1.5e-34 118.7 0.7 2e-34 118.4 0.7 1.2 1 0 0 1 1 1 1 Regulator of ribonuclease activity B Ag332 PF04671.12 ORF47536 - 2.5 8.1 8.0 1.7 8.7 0.2 3.4 3 0 0 3 3 3 0 Erythrocyte membrane-associated giant protein antigen 332 MORN PF02493.20 ORF47344 - 9.4e-30 100.7 34.5 3.3e-07 29.8 2.4 7.0 7 0 0 7 7 7 7 MORN repeat RNA_pol_Rpb4 PF03874.16 ORF43333 - 1.4e-07 31.8 0.1 1.7e-07 31.6 0.1 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb4 DUF438 PF04282.13 ORF43333 - 0.04 13.9 0.3 0.099 12.6 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF438) PdxJ PF03740.13 ORF43333 - 0.18 10.9 0.0 0.25 10.4 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthesis protein PdxJ SKI PF01202.22 ORF41657 - 4.4e-07 30.1 0.0 4.7e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Shikimate kinase SWI-SNF_Ssr4 PF08549.10 ORF41160 - 0.019 13.6 5.2 0.019 13.6 5.2 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) TPR_MLP1_2 PF07926.12 ORF41160 - 0.031 14.3 8.5 0.055 13.5 8.5 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein PSDC PF12588.8 ORF41160 - 0.058 13.4 0.2 0.073 13.0 0.2 1.1 1 0 0 1 1 1 0 Phophatidylserine decarboxylase OmpH PF03938.14 ORF41160 - 0.1 12.9 9.3 0.13 12.6 9.3 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) eIF-4B PF06273.11 ORF41160 - 0.11 11.5 7.5 0.15 11.1 7.5 1.1 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B 7tm_6 PF02949.20 ORF41160 - 0.11 11.5 0.6 0.15 11.1 0.6 1.2 1 0 0 1 1 1 0 7tm Odorant receptor DUF5132 PF17195.4 ORF41160 - 0.15 12.1 0.7 2.9 8.0 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF5132) Med9 PF07544.13 ORF41160 - 0.18 11.9 6.5 0.38 10.9 6.5 1.6 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Fib_alpha PF08702.10 ORF41160 - 0.21 11.8 5.8 0.31 11.2 5.8 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family APG6_N PF17675.1 ORF41160 - 0.66 10.5 12.0 1 9.9 12.0 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Histone_HNS PF00816.21 ORF41160 - 0.99 10.3 4.5 1.6 9.6 4.5 1.3 1 0 0 1 1 1 0 H-NS histone family CENP-H PF05837.12 ORF41160 - 6.7 7.2 10.2 1.2 9.6 6.8 1.4 2 0 0 2 2 1 0 Centromere protein H (CENP-H) DUF3039 PF11238.8 ORF40071 - 0.045 13.5 1.7 0.25 11.1 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) Pro_isomerase PF00160.21 ORF38459 - 0.00069 19.9 0.0 0.00099 19.4 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MORN PF02493.20 ORF37845 - 9.4e-30 100.7 34.5 3.3e-07 29.8 2.4 7.0 7 0 0 7 7 7 7 MORN repeat DUSP PF06337.12 ORF36359 - 1.3e-07 32.2 0.1 2e-07 31.5 0.1 1.3 1 0 0 1 1 1 1 DUSP domain Dscam_C PF12355.8 ORF36324 - 2.4 9.2 7.8 0.75 10.8 4.5 1.7 1 1 0 2 2 2 0 Down syndrome cell adhesion molecule C terminal PAN_3 PF08277.12 ORF34462 - 0.0026 17.5 0.7 0.0057 16.4 0.7 1.5 1 0 0 1 1 1 1 PAN-like domain PAN_2 PF08276.11 ORF34462 - 0.0077 16.3 1.7 0.0077 16.3 1.7 1.9 2 0 0 2 2 2 1 PAN-like domain U-box PF04564.15 ORF33107 - 0.0076 16.4 0.1 0.016 15.4 0.1 1.6 1 1 0 1 1 1 1 U-box domain EF-hand_8 PF13833.6 ORF29166 - 3.5e-10 39.6 0.1 1e-07 31.7 0.1 2.8 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF29166 - 3e-08 32.9 0.0 0.00046 19.9 0.0 2.8 2 1 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF29166 - 4.9e-08 33.3 0.5 2.5e-05 24.6 0.0 2.8 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF29166 - 1.5e-07 30.4 5.7 7.5e-07 28.3 0.3 3.6 5 0 0 5 5 5 1 EF hand EF-hand_5 PF13202.6 ORF29166 - 0.0002 20.7 2.4 0.0009 18.6 0.4 2.8 3 0 0 3 3 3 1 EF hand EF-hand_4 PF12763.7 ORF29166 - 0.048 13.6 0.2 1.1 9.3 0.2 2.1 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand SWI-SNF_Ssr4 PF08549.10 ORF28068 - 0.019 13.6 5.2 0.019 13.6 5.2 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) TPR_MLP1_2 PF07926.12 ORF28068 - 0.031 14.3 8.5 0.055 13.5 8.5 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein PSDC PF12588.8 ORF28068 - 0.058 13.4 0.2 0.073 13.0 0.2 1.1 1 0 0 1 1 1 0 Phophatidylserine decarboxylase OmpH PF03938.14 ORF28068 - 0.1 12.9 9.3 0.13 12.6 9.3 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) eIF-4B PF06273.11 ORF28068 - 0.11 11.5 7.5 0.15 11.1 7.5 1.1 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B 7tm_6 PF02949.20 ORF28068 - 0.11 11.5 0.6 0.15 11.1 0.6 1.2 1 0 0 1 1 1 0 7tm Odorant receptor DUF5132 PF17195.4 ORF28068 - 0.15 12.1 0.7 2.9 8.0 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF5132) Med9 PF07544.13 ORF28068 - 0.18 11.9 6.5 0.38 10.9 6.5 1.6 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Fib_alpha PF08702.10 ORF28068 - 0.21 11.8 5.8 0.31 11.2 5.8 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family APG6_N PF17675.1 ORF28068 - 0.66 10.5 12.0 1 9.9 12.0 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Histone_HNS PF00816.21 ORF28068 - 0.99 10.3 4.5 1.6 9.6 4.5 1.3 1 0 0 1 1 1 0 H-NS histone family CENP-H PF05837.12 ORF28068 - 6.7 7.2 10.2 1.2 9.6 6.8 1.4 2 0 0 2 2 1 0 Centromere protein H (CENP-H) RFX_DNA_binding PF02257.15 ORF26350 - 0.099 13.3 0.0 0.18 12.5 0.0 1.4 1 0 0 1 1 1 0 RFX DNA-binding domain DUF1993 PF09351.10 ORF242 - 0.14 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) UPF0047 PF01894.17 ORF23155 - 1.4e-34 118.7 0.0 1.6e-34 118.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 Sugar_tr PF00083.24 ORF18738 - 1.4e-19 70.3 2.3 1.7e-19 70.1 2.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF18738 - 9.3e-11 41.2 6.5 1.1e-10 41.0 6.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Nuc_H_symport PF03825.16 ORF18738 - 5.9e-05 22.2 0.7 7.1e-05 22.0 0.7 1.0 1 0 0 1 1 1 1 Nucleoside H+ symporter PsbL PF02419.17 ORF18443 - 2.4e-18 65.8 0.9 3.8e-18 65.2 0.9 1.3 1 0 0 1 1 1 1 PsbL protein RPA_C PF08784.11 ORF18152 - 0.011 16.4 0.0 0.014 16.0 0.0 1.1 1 0 0 1 1 1 0 Replication protein A C terminal TF_Otx PF03529.13 ORF16217 - 0.01 16.2 0.1 0.016 15.6 0.1 1.2 1 0 0 1 1 1 0 Otx1 transcription factor CENP-B_N PF04218.13 ORF16065 - 0.13 11.9 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Frataxin_Cyay PF01491.16 ORF16065 - 0.24 11.5 0.6 0.35 11.0 0.6 1.2 1 0 0 1 1 1 0 Frataxin-like domain Regnase_1_C PF18561.1 ORF1604 - 0.18 11.5 0.5 0.65 9.8 0.2 2.0 2 0 0 2 2 2 0 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain Abhydrolase_9_N PF15420.6 ORF153006 - 0.0029 17.6 0.2 0.0036 17.3 0.2 1.1 1 0 0 1 1 1 1 Alpha/beta-hydrolase family N-terminus Rtf2 PF04641.12 ORF153006 - 0.04 13.3 0.1 0.049 13.0 0.1 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger Polysacc_synt_4 PF04669.13 ORF153006 - 0.091 12.3 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis PP_M1 PF03012.14 ORF151706 - 0.06 12.9 0.1 0.078 12.5 0.1 1.1 1 0 0 1 1 1 0 Phosphoprotein Calsequestrin PF01216.17 ORF151706 - 0.085 11.9 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Calsequestrin Phosphoprotein PF00922.17 ORF147745 - 0.012 15.2 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein Cadherin_C_2 PF16492.5 ORF14770 - 8.4 7.2 8.8 14 6.5 8.8 1.5 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal GF_recep_IV PF14843.6 ORF147676 - 0.0048 16.7 0.9 0.0071 16.2 0.9 1.2 1 0 0 1 1 1 1 Growth factor receptor domain IV PAR1 PF06521.11 ORF147676 - 0.043 13.5 0.2 0.064 12.9 0.2 1.3 1 0 0 1 1 1 0 PAR1 protein RmuC PF02646.16 ORF14718 - 0.031 13.4 1.2 0.043 12.9 1.2 1.1 1 0 0 1 1 1 0 RmuC family Abi_C PF14355.6 ORF14718 - 0.11 12.7 0.3 0.15 12.2 0.3 1.3 1 0 0 1 1 1 0 Abortive infection C-terminus Ras PF00071.22 ORF146787 - 2.9e-28 98.5 0.1 3.5e-28 98.2 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF146787 - 1.8e-10 41.1 0.0 3.2e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase GTP_EFTU PF00009.27 ORF146787 - 0.0006 19.4 0.0 0.0023 17.5 0.0 1.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Arf PF00025.21 ORF146787 - 0.0019 17.7 0.0 0.0025 17.3 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GAF PF01590.26 ORF144500 - 6.7e-14 52.7 0.0 7.4e-14 52.5 0.0 1.0 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 ORF144500 - 2.4e-11 44.1 0.0 2.7e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 ORF144500 - 0.00012 22.5 0.0 0.00014 22.2 0.0 1.1 1 0 0 1 1 1 1 GAF domain Staphylcoagulse PF04022.12 ORF144500 - 0.083 12.4 0.6 0.16 11.5 0.5 1.5 2 0 0 2 2 2 0 Staphylocoagulase repeat TfoX_N PF04993.13 ORF142828 - 0.056 13.7 0.0 0.078 13.2 0.0 1.2 1 0 0 1 1 1 0 TfoX N-terminal domain LptF_LptG PF03739.14 ORF141680 - 0.01 14.7 0.5 0.015 14.2 0.5 1.2 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG CS PF04969.16 ORF14129 - 1.7e-07 32.2 0.0 2.4e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 CS domain FAM153 PF15722.5 ORF14129 - 0.012 15.9 0.2 0.031 14.6 0.2 1.6 1 1 0 1 1 1 0 FAM153 family Propep_M14 PF02244.16 ORF14129 - 0.074 13.5 0.1 0.11 12.9 0.1 1.3 1 0 0 1 1 1 0 Carboxypeptidase activation peptide DUF1390 PF07150.11 ORF14129 - 0.094 12.4 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1390) EF-hand_7 PF13499.6 ORF13940 - 5.3e-08 33.2 1.7 0.00018 21.9 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF13940 - 6e-05 22.3 0.4 0.0051 16.3 0.0 2.9 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF13940 - 0.00043 20.0 0.2 0.048 13.6 0.0 2.6 2 1 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF13940 - 0.02 14.4 0.3 0.13 11.8 0.0 2.3 2 0 0 2 2 2 0 EF hand EF-hand_8 PF13833.6 ORF13940 - 0.021 14.7 0.5 4 7.4 0.1 2.8 1 1 2 3 3 3 0 EF-hand domain pair EF-hand_9 PF14658.6 ORF13940 - 0.044 14.1 0.1 12 6.3 0.1 2.4 1 1 2 3 3 3 0 EF-hand domain Nuc_rec_co-act PF08815.10 ORF13940 - 0.045 13.6 1.4 2.9 7.8 0.5 2.5 2 1 0 2 2 2 0 Nuclear receptor coactivator DUF3592 PF12158.8 ORF139271 - 2.8e-11 43.7 0.0 3.6e-11 43.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3592) DUF2614 PF11023.8 ORF139271 - 0.19 11.9 0.8 0.25 11.4 0.8 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain RNA_pol_Rpb4 PF03874.16 ORF138227 - 6.7e-08 32.9 0.2 1.2e-07 32.1 0.2 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb4 COPI_assoc PF08507.10 ORF138227 - 0.034 14.2 0.0 0.042 13.9 0.0 1.2 1 0 0 1 1 1 0 COPI associated protein DUF1690 PF07956.11 ORF137475 - 0.03 14.7 3.1 0.039 14.4 3.1 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) APC_N_CC PF16689.5 ORF137475 - 0.32 11.1 3.4 15 5.7 1.0 2.9 2 1 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain ZapB PF06005.12 ORF137475 - 1.9 9.0 10.7 3.3 8.2 3.7 2.2 1 1 1 2 2 2 0 Cell division protein ZapB GPS2_interact PF15784.5 ORF137475 - 4.8 7.7 8.9 9 6.8 0.9 2.4 1 1 1 2 2 2 0 G-protein pathway suppressor 2-interacting domain UQ_con PF00179.26 ORF137144 - 4.3e-41 139.8 0.0 5e-41 139.6 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF137144 - 0.017 14.9 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B UEV PF05743.13 ORF137144 - 0.1 12.4 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 UEV domain Spidroin_MaSp PF11260.8 ORF135878 - 0.014 15.7 2.0 0.018 15.3 1.4 1.6 1 1 0 1 1 1 0 Major ampullate spidroin 1 and 2 DUF4632 PF15451.6 ORF133105 - 0.64 10.1 2.9 0.33 11.1 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4632) MIP PF00230.20 ORF132956 - 5.8e-07 29.5 2.1 7.1e-07 29.2 2.1 1.0 1 0 0 1 1 1 1 Major intrinsic protein MIG-14_Wnt-bd PF06664.12 ORF131499 - 0.031 13.5 0.0 0.04 13.1 0.0 1.1 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion FAM216B PF15107.6 ORF131499 - 0.048 13.5 0.0 0.064 13.1 0.0 1.2 1 0 0 1 1 1 0 FAM216B protein family HAMP_N3 PF18575.1 ORF129586 - 0.11 12.1 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 HAMP N-terminal domain 3 MFS_2 PF13347.6 ORF129354 - 4.8e-24 84.7 2.3 5.4e-24 84.5 2.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Pex24p PF06398.11 ORF128568 - 0.0086 15.1 1.2 0.0098 14.9 1.2 1.1 1 0 0 1 1 1 1 Integral peroxisomal membrane peroxin F-box-like PF12937.7 ORF127761 - 2.9e-05 23.9 0.1 5.3e-05 23.0 0.1 1.4 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 ORF127761 - 0.016 15.1 0.0 0.033 14.1 0.0 1.5 1 0 0 1 1 1 0 F-box domain MMR1 PF08505.10 ORF127032 - 0.81 9.9 18.2 1 9.6 18.2 1.1 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein AAA_11 PF13086.6 ORF127032 - 9.7 5.9 17.9 11 5.7 17.9 1.1 1 0 0 1 1 1 0 AAA domain PRP38_assoc PF12871.7 ORF126688 - 2.6 8.7 11.2 0.058 14.0 2.2 2.0 1 1 1 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term DPM3 PF08285.11 ORF126670 - 0.058 13.6 1.5 0.078 13.2 0.5 1.7 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF952 PF06108.12 ORF125242 - 0.17 11.9 0.0 0.86 9.6 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF952) Bac_RepA_C PF18008.1 ORF124628 - 0.014 15.7 1.3 1.3 9.4 0.2 2.2 2 0 0 2 2 2 0 Replication initiator protein A C-terminal domain DUF4632 PF15451.6 ORF123943 - 0.64 10.1 2.9 0.33 11.1 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4632) DUF5383 PF17355.2 ORF123550 - 1 9.8 2.2 1.5 9.2 2.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5383) DUF1580 PF07618.11 ORF122172 - 0.097 12.3 0.4 0.94 9.1 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1580) DUF2639 PF11121.8 ORF121707 - 0.071 13.2 0.4 0.18 11.8 0.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2639) Deltaretro_Tax PF05599.11 ORF121652 - 0.72 10.4 4.2 3.4 8.2 1.0 2.2 1 1 1 2 2 2 0 Deltaretrovirus Tax protein EF-hand_5 PF13202.6 ORF119811 - 0.00037 19.8 0.0 0.00063 19.1 0.0 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF119811 - 0.00039 20.1 0.0 0.00093 18.9 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF119811 - 0.0021 17.5 0.0 0.0048 16.3 0.0 1.6 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF119811 - 0.0095 16.4 0.0 0.02 15.4 0.0 1.6 2 0 0 2 2 2 1 EF-hand domain pair DHDPS PF00701.22 ORF117706 - 1.1e-34 119.5 0.0 1.2e-34 119.4 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family UBA_3 PF09288.10 ORF117706 - 0.074 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Fungal ubiquitin-associated domain DUF2254 PF10011.9 ORF117561 - 9.9 4.9 6.4 1.3 7.8 1.9 1.6 2 0 0 2 2 2 0 Predicted membrane protein (DUF2254) DUF3678 PF12435.8 ORF117136 - 3.6 7.1 6.2 8.4 5.9 0.6 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) Phosphoprotein PF00922.17 ORF116 - 0.012 15.2 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein DUF218 PF02698.17 ORF114866 - 0.61 10.1 4.1 1.6 8.7 4.0 1.8 1 1 0 1 1 1 0 DUF218 domain Comm PF15957.5 ORF111960 - 0.051 13.9 0.9 0.092 13.1 0.9 1.6 1 0 0 1 1 1 0 Commissureless RNR_N PF08343.10 ORF109689 - 0.078 13.0 0.1 0.51 10.4 0.1 2.0 2 0 0 2 2 2 0 Ribonucleotide reductase N-terminal Ly-6_related PF06579.12 ORF109053 - 0.2 11.9 4.3 0.37 11.0 1.9 2.3 2 1 1 3 3 3 0 Caenorhabditis elegans ly-6-related protein KIAA1430 PF13879.6 ORF107502 - 2.8e-08 34.4 5.0 2.8e-08 34.4 5.0 2.1 2 0 0 2 2 2 1 KIAA1430 homologue Receptor_2B4 PF11465.8 ORF107502 - 0.089 13.0 0.2 0.16 12.2 0.1 1.5 1 1 0 1 1 1 0 Natural killer cell receptor 2B4 NDUFB11 PF17250.2 ORF10711 - 0.065 13.9 0.6 13 6.5 0.0 2.2 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase 11 kDa subunit KIAA1430 PF13879.6 ORF106696 - 2.8e-08 34.4 5.0 2.8e-08 34.4 5.0 2.1 2 0 0 2 2 2 1 KIAA1430 homologue Receptor_2B4 PF11465.8 ORF106696 - 0.089 13.0 0.2 0.16 12.2 0.1 1.5 1 1 0 1 1 1 0 Natural killer cell receptor 2B4 MreD PF04093.12 ORF105060 - 5.3e-40 137.1 17.6 5.9e-40 137.0 17.6 1.0 1 0 0 1 1 1 1 rod shape-determining protein MreD RFX_DNA_binding PF02257.15 ORF103234 - 0.099 13.3 0.0 0.18 12.5 0.0 1.4 1 0 0 1 1 1 0 RFX DNA-binding domain T2SSI PF02501.17 ORF102560 - 8.5e-13 48.3 0.1 1.3e-12 47.7 0.1 1.2 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein I N_methyl PF07963.12 ORF102560 - 7.8e-07 28.4 2.4 1.5e-06 27.5 2.4 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif PulG PF11773.8 ORF102560 - 0.014 15.2 1.1 0.022 14.6 1.1 1.3 1 0 0 1 1 1 0 Type II secretory pathway pseudopilin ANF_receptor PF01094.28 ORF100156 - 0.047 12.8 0.1 0.057 12.5 0.1 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region PS_Dcarbxylase PF02666.15 NODE_47067_length_409_cov_1.692513_g39232_i0reverse_frame_1 - 0.19 11.3 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylserine decarboxylase DUF2852 PF11014.8 NODE_47053_length_409_cov_2.409091_g39218_i0reverse_frame_1 - 0.0041 17.3 0.1 0.0057 16.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2852) EF-hand_7 PF13499.6 NODE_47053_length_409_cov_2.409091_g39218_i0reverse_frame_1 - 0.023 15.1 0.1 0.031 14.7 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_8 PF13833.6 NODE_47053_length_409_cov_2.409091_g39218_i0reverse_frame_1 - 0.034 14.0 0.0 0.071 13.0 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain pair Glyco_trans_2_3 PF13632.6 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 5.5e-23 81.9 0.0 6.3e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 1.9e-14 54.1 0.0 2.1e-14 54.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 8.1e-10 38.4 0.0 9.5e-10 38.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 21 Chitin_synth_2 PF03142.15 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 2.1e-05 23.3 0.1 0.0062 15.2 0.0 2.0 1 1 1 2 2 2 2 Chitin synthase Glycos_transf_2 PF00535.26 NODE_47051_length_409_cov_2.540107_g39216_i0forward_frame_1 - 0.15 11.8 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 HTH_DeoR PF08220.12 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 2.4e-21 75.2 0.2 3.3e-21 74.8 0.2 1.2 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 7e-10 38.7 0.1 1e-09 38.2 0.1 1.3 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 0.00042 19.9 0.1 0.00092 18.8 0.1 1.5 1 1 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_5 PF01022.20 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 0.0019 18.0 0.0 0.0032 17.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF977 PF06163.11 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 0.081 12.9 0.2 0.24 11.3 0.1 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF977) DUF1670 PF07900.11 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 0.13 11.6 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) DUF2313 PF10076.9 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_1 - 0.13 12.1 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2313) BetaGal_dom3 PF13363.6 NODE_47034_length_409_cov_62.050802_g39199_i0forward_frame_1 - 0.12 11.9 0.1 13 5.4 0.0 2.8 3 0 0 3 3 3 0 Beta-galactosidase, domain 3 TTc_toxin_rep PF18807.1 NODE_47034_length_409_cov_62.050802_g39199_i0forward_frame_1 - 0.22 11.3 0.9 1.1 9.1 0.3 2.1 2 0 0 2 2 2 0 Tripartite Tc toxins repeat Rpr2 PF04032.16 NODE_47034_length_409_cov_62.050802_g39199_i0forward_frame_1 - 0.97 9.8 6.9 0.51 10.7 0.3 2.6 2 1 1 3 3 3 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Bact_transglu_N PF08379.10 NODE_47030_length_409_cov_66.604278_g39196_i0forward_frame_1 - 0.054 14.4 0.0 0.1 13.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial transglutaminase-like N-terminal region NodZ PF05830.11 NODE_47029_length_409_cov_67.262032_g39195_i0reverse_frame_1 - 0.1 11.4 0.3 0.29 9.9 0.1 1.6 1 1 1 2 2 2 0 Nodulation protein Z (NodZ) DUF2070 PF09843.9 NODE_47029_length_409_cov_67.262032_g39195_i0forward_frame_1 - 0.76 8.0 8.6 0.79 7.9 8.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Ank_2 PF12796.7 NODE_47023_length_409_cov_110.962567_g39189_i0reverse_frame_1 - 3.7e-07 30.6 0.0 9.8e-07 29.3 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_47023_length_409_cov_110.962567_g39189_i0reverse_frame_1 - 1.2e-06 28.9 0.0 0.00091 19.8 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_47023_length_409_cov_110.962567_g39189_i0reverse_frame_1 - 0.00026 21.2 0.0 14 6.7 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 NODE_47023_length_409_cov_110.962567_g39189_i0reverse_frame_1 - 0.0012 19.2 0.0 11 6.6 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Phospholip_B PF04916.13 NODE_47022_length_409_cov_113.219251_g39188_i0reverse_frame_1 - 5.1e-18 65.0 0.0 6e-18 64.7 0.0 1.0 1 0 0 1 1 1 1 Phospholipase B DUF1218 PF06749.12 NODE_46999_length_410_cov_1.200000_g39167_i0reverse_frame_1 - 0.028 14.9 0.7 0.047 14.2 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) DUF1281_C PF18406.1 NODE_46998_length_410_cov_1.346667_g39166_i0reverse_frame_1 - 0.036 13.8 0.2 0.064 13.0 0.2 1.4 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein DUF1280 PF06918.14 NODE_46993_length_410_cov_2.184000_g39161_i0reverse_frame_1 - 0.079 12.5 0.3 0.099 12.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1280) Topo_Zn_Ribbon PF08272.11 NODE_46992_length_410_cov_2.210667_g39160_i0reverse_frame_1 - 3.6e-40 135.4 0.3 9.1e-24 82.8 2.5 2.2 2 0 0 2 2 2 2 Topoisomerase I zinc-ribbon-like zf-C4_Topoisom PF01396.19 NODE_46992_length_410_cov_2.210667_g39160_i0reverse_frame_1 - 5.6e-05 22.8 0.2 0.085 12.7 0.3 2.4 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger cNMP_binding PF00027.29 NODE_46986_length_410_cov_3.488000_g39154_i0forward_frame_1 - 2.5e-17 62.7 0.0 3.1e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain PBP_sp32 PF07222.12 NODE_46983_length_410_cov_3.861333_g39151_i0reverse_frame_1 - 0.042 13.3 0.1 0.053 13.0 0.1 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 CPSase_sm_chain PF00988.22 NODE_46983_length_410_cov_3.861333_g39151_i0reverse_frame_1 - 0.13 12.0 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase small chain, CPSase domain FHIPEP PF00771.20 NODE_46982_length_410_cov_3.952000_g39150_i0forward_frame_1 - 0.035 12.6 1.2 0.039 12.4 1.2 1.0 1 0 0 1 1 1 0 FHIPEP family PRIMA1 PF16101.5 NODE_46979_length_410_cov_12.194667_g39147_i0reverse_frame_1 - 1.3 9.0 7.9 0.74 9.9 3.5 2.1 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 SR-25 PF10500.9 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_1 - 0.77 9.3 14.2 0.83 9.2 14.2 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RBM1CTR PF08081.11 NODE_46976_length_410_cov_57.074667_g39144_i0forward_frame_1 - 0.077 13.1 0.6 0.14 12.3 0.6 1.3 1 0 0 1 1 1 0 RBM1CTR (NUC064) family AIB PF15334.6 NODE_46975_length_410_cov_58.994667_g39143_i0reverse_frame_1 - 0.012 15.0 8.6 0.015 14.7 8.6 1.1 1 0 0 1 1 1 0 Aurora kinase A and ninein interacting protein Peptidase_S49_N PF08496.10 NODE_46975_length_410_cov_58.994667_g39143_i0reverse_frame_1 - 0.83 9.7 5.6 1.2 9.2 5.6 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal TMEM100 PF16311.5 NODE_46970_length_410_cov_73.469333_g39139_i0reverse_frame_1 - 1 8.9 4.4 1.5 8.4 4.4 1.2 1 0 0 1 1 1 0 Transmembrane protein 100 Peptidase_A21 PF03566.13 NODE_46967_length_410_cov_76.437333_g39136_i0forward_frame_1 - 5.2 5.2 5.9 5 5.3 5.9 1.1 1 0 0 1 1 1 0 Peptidase family A21 Fer4_9 PF13187.6 NODE_46952_length_410_cov_120.280000_g39122_i0reverse_frame_1 - 0.091 12.9 0.5 0.091 12.9 0.5 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Phe_ZIP PF08916.11 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_1 - 4.1 8.2 9.6 14 6.5 0.3 3.0 2 1 1 3 3 3 0 Phenylalanine zipper Stealth_CR1 PF17101.5 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_1 - 5 6.9 7.3 35 4.3 0.3 3.2 3 0 0 3 3 3 0 Stealth protein CR1, conserved region 1 DUF2678 PF10856.8 NODE_46945_length_410_cov_279.952000_g39116_i0forward_frame_1 - 0.19 11.7 5.1 0.29 11.1 5.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) DUF2678 PF10856.8 NODE_46944_length_410_cov_284.901333_g39115_i0reverse_frame_1 - 0.19 11.7 5.1 0.29 11.1 5.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) UPF0047 PF01894.17 NODE_46942_length_410_cov_314.669333_g39113_i0reverse_frame_1 - 0.019 15.1 0.1 0.026 14.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0047 Utp12 PF04003.12 NODE_46940_length_410_cov_589.042667_g39111_i0reverse_frame_1 - 0.048 14.0 0.3 2.5 8.4 0.0 2.2 2 0 0 2 2 2 0 Dip2/Utp12 Family DUF3523 PF12037.8 NODE_46932_length_411_cov_1.271277_g39105_i0forward_frame_1 - 1e-14 54.6 24.0 1.2e-14 54.3 24.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3523) DUF1400 PF07176.11 NODE_46932_length_411_cov_1.271277_g39105_i0forward_frame_1 - 0.025 14.9 1.1 0.042 14.1 1.1 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1400) RabGAP-TBC PF00566.18 NODE_46932_length_411_cov_1.271277_g39105_i0forward_frame_1 - 4.4 6.9 11.0 4.9 6.8 10.1 1.6 1 1 2 3 3 3 0 Rab-GTPase-TBC domain OppC_N PF12911.7 NODE_46931_length_411_cov_1.465426_g39104_i0reverse_frame_1 - 0.1 12.6 1.6 0.22 11.5 1.6 1.6 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C Methyltr_RsmF_N PF17125.5 NODE_46930_length_411_cov_1.515957_g39103_i0reverse_frame_1 - 0.12 12.9 2.8 3.2 8.3 0.8 2.2 2 0 0 2 2 2 0 N-terminal domain of 16S rRNA methyltransferase RsmF EMC3_TMCO1 PF01956.16 NODE_46930_length_411_cov_1.515957_g39103_i0reverse_frame_1 - 2.2 8.0 5.3 4.4 7.0 5.3 1.7 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like IHHNV_capsid PF16530.5 NODE_46929_length_411_cov_1.686170_g39102_i0reverse_frame_1 - 0.0054 15.9 0.0 0.0062 15.7 0.0 1.2 1 0 0 1 1 1 1 Infectious hypodermal and haematopoietic necrosis virus, capsid PknG_TPR PF16918.5 NODE_46923_length_411_cov_2.180851_g39096_i0forward_frame_1 - 0.052 12.3 0.3 0.069 11.9 0.3 1.1 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat Leg1 PF05612.12 NODE_46920_length_411_cov_2.382979_g39093_i0reverse_frame_1 - 0.027 13.6 0.1 0.036 13.2 0.1 1.1 1 0 0 1 1 1 0 Leg1 DUF1287 PF06940.11 NODE_46914_length_411_cov_2.867021_g39087_i0forward_frame_1 - 6.7e-09 35.6 0.1 9e-09 35.2 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1287) CstA_5TM PF13722.6 NODE_46914_length_411_cov_2.867021_g39087_i0forward_frame_1 - 0.043 14.2 0.0 0.051 14.0 0.0 1.2 1 0 0 1 1 1 0 5TM C-terminal transporter carbon starvation CstA MFS_1 PF07690.16 NODE_46913_length_411_cov_2.914894_g39086_i0reverse_frame_1 - 0.12 11.3 3.4 0.13 11.1 3.4 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily NOA36 PF06524.12 NODE_46913_length_411_cov_2.914894_g39086_i0reverse_frame_1 - 1.1 8.6 7.0 1.3 8.3 7.0 1.1 1 0 0 1 1 1 0 NOA36 protein cNMP_binding PF00027.29 NODE_46904_length_411_cov_33.135638_g39077_i0reverse_frame_1 - 0.1 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain DUF2381 PF09544.10 NODE_46903_length_411_cov_57.747340_g39076_i0forward_frame_1 - 0.24 10.9 1.5 0.7 9.4 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2381) Kelch_1 PF01344.25 NODE_46902_length_411_cov_58.507979_g39075_i0forward_frame_1 - 1.7e-05 24.3 0.3 3.3e-05 23.4 0.3 1.5 1 0 0 1 1 1 1 Kelch motif Kelch_2 PF07646.15 NODE_46902_length_411_cov_58.507979_g39075_i0forward_frame_1 - 9.4e-05 22.2 1.3 0.023 14.6 0.5 2.8 2 1 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_46902_length_411_cov_58.507979_g39075_i0forward_frame_1 - 0.00052 20.2 0.1 0.41 11.0 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_46902_length_411_cov_58.507979_g39075_i0forward_frame_1 - 0.012 15.6 0.2 0.049 13.6 0.1 2.0 3 0 0 3 3 3 0 Galactose oxidase, central domain DOCK_N PF16172.5 NODE_46889_length_411_cov_104.773936_g39062_i0reverse_frame_1 - 0.11 11.5 0.0 0.12 11.2 0.0 1.0 1 0 0 1 1 1 0 DOCK N-terminus DUF630 PF04783.12 NODE_46884_length_411_cov_117.199468_g39057_i0forward_frame_1 - 0.058 13.6 0.6 0.12 12.6 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF630) Dickkopf_N PF04706.12 NODE_46873_length_411_cov_161.882979_g39046_i0forward_frame_1 - 0.15 12.5 0.8 0.15 12.5 0.8 1.8 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region Glyco_transf_22 PF03901.17 NODE_46873_length_411_cov_161.882979_g39046_i0forward_frame_1 - 0.23 10.6 1.4 0.25 10.5 1.4 1.1 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family Gamma-thionin PF00304.20 NODE_46867_length_411_cov_230.515957_g39040_i0reverse_frame_1 - 0.047 13.9 4.7 0.13 12.5 4.7 1.8 1 0 0 1 1 1 0 Gamma-thionin family Zip PF02535.22 NODE_46860_length_411_cov_818.013298_g39033_i0forward_frame_1 - 5.2 6.2 6.0 5.9 6.0 6.0 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter CRAL_TRIO PF00650.20 NODE_46858_length_412_cov_1.331565_g39032_i0reverse_frame_3 - 0.0048 16.6 0.5 0.0058 16.4 0.5 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain DUF1495 PF07381.11 NODE_46858_length_412_cov_1.331565_g39032_i0reverse_frame_3 - 0.041 13.7 0.6 0.088 12.7 0.1 1.8 2 1 0 2 2 2 0 Winged helix DNA-binding domain (DUF1495) DUF1651 PF07864.11 NODE_46858_length_412_cov_1.331565_g39032_i0reverse_frame_3 - 0.089 13.1 0.1 0.15 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1651) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks188.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks188.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks188.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks188.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Lipocalin PF00061.23 NODE_46857_length_412_cov_1.421751_g39031_i0forward_frame_2 - 0.097 12.9 1.4 0.37 11.0 0.0 2.1 2 1 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family AAA_lid_1 PF17857.1 NODE_46848_length_412_cov_2.283820_g39022_i0forward_frame_3 - 0.068 13.4 0.2 0.1 12.8 0.2 1.3 1 0 0 1 1 1 0 AAA+ lid domain DUF463 PF04317.12 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 5.4e-13 48.7 0.2 7e-13 48.3 0.2 1.2 1 0 0 1 1 1 1 YcjX-like family, DUF463 T2SSE PF00437.20 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 0.029 13.4 0.0 0.039 13.0 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein Chlorophyllase PF07224.11 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 0.047 12.7 0.0 0.065 12.2 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase ATPase_2 PF01637.18 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 0.14 12.1 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea RNA_pol_Rpb2_2 PF04561.14 NODE_46844_length_412_cov_2.477454_g39018_i0reverse_frame_3 - 0.15 11.7 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 2 LacI PF00356.21 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 2.6e-10 39.9 0.5 2.6e-10 39.9 0.5 1.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family MarR_2 PF12802.7 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.0011 18.8 0.0 0.002 18.0 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_38 PF13936.6 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.0012 18.6 0.0 0.0023 17.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.0059 16.4 0.1 0.011 15.5 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Crp_2 PF13545.6 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.008 16.1 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.0083 15.9 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_3 PF01381.22 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.01 15.9 0.0 0.017 15.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix MarR PF01047.22 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.016 15.1 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_7 PF02796.15 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.016 15.3 0.1 0.029 14.4 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase TrmB PF01978.19 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.038 13.9 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.044 13.7 0.0 0.092 12.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_29 PF13551.6 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.14 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix SpoIIID PF12116.8 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.15 12.2 0.1 0.3 11.2 0.1 1.6 1 1 0 1 1 1 0 Stage III sporulation protein D HTH_Tnp_ISL3 PF13542.6 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.15 11.5 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_10 PF04967.12 NODE_46844_length_412_cov_2.477454_g39018_i0forward_frame_2 - 0.2 11.5 0.0 0.36 10.7 0.0 1.3 1 0 0 1 1 1 0 HTH DNA binding domain Orthopox_C10L PF07020.11 NODE_46843_length_412_cov_2.482759_g39017_i0reverse_frame_3 - 0.032 15.0 0.0 0.065 14.0 0.0 1.5 1 1 0 1 1 1 0 Orthopoxvirus C10L protein SNARE_assoc PF09335.11 NODE_46843_length_412_cov_2.482759_g39017_i0forward_frame_3 - 3.4e-22 79.2 5.9 3.4e-22 79.2 5.9 1.9 1 1 1 2 2 2 1 SNARE associated Golgi protein DUF1345 PF07077.11 NODE_46839_length_412_cov_2.726790_g39013_i0forward_frame_3 - 0.021 14.5 2.7 0.028 14.1 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1345) NTP_transferase PF00483.23 NODE_46839_length_412_cov_2.726790_g39013_i0forward_frame_2 - 8.8e-34 117.2 0.0 9.4e-34 117.1 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase Oxidored_q4 PF00507.19 NODE_46838_length_412_cov_2.729443_g39012_i0reverse_frame_2 - 0.91 9.7 7.3 1.2 9.3 0.3 2.1 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DUF4469 PF14734.6 NODE_46837_length_412_cov_2.766578_g39011_i0reverse_frame_2 - 0.045 13.9 0.0 0.06 13.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4469) with IG-like fold FixS PF03597.15 NODE_46834_length_412_cov_3.159151_g39008_i0forward_frame_3 - 0.13 12.0 0.6 0.13 12.0 0.6 1.6 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type Beta-TrCP_D PF12125.8 NODE_46824_length_412_cov_35.169761_g38998_i0forward_frame_3 - 0.19 11.7 0.0 0.33 10.9 0.0 1.4 1 0 0 1 1 1 0 D domain of beta-TrCP DUF4371 PF14291.6 NODE_46823_length_412_cov_41.657825_g38997_i0reverse_frame_3 - 0.035 13.7 1.8 0.042 13.5 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4371) SP_C-Propep PF08999.10 NODE_46822_length_412_cov_51.477454_g38996_i0forward_frame_3 - 0.011 15.5 0.4 0.017 14.9 0.4 1.3 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide VEGFR-2_TMD PF17988.1 NODE_46820_length_412_cov_54.188329_g2374_i1reverse_frame_3 - 0.22 11.0 3.4 0.45 10.0 3.4 1.5 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain SirA PF10747.9 NODE_46820_length_412_cov_54.188329_g2374_i1forward_frame_2 - 0.22 11.9 1.6 0.28 11.5 1.6 1.2 1 0 0 1 1 1 0 Sporulation inhibitor of replication protein SirA Inhibitor_I67 PF11405.8 NODE_46811_length_412_cov_79.832891_g38986_i0reverse_frame_2 - 0.0045 17.2 4.5 0.015 15.6 1.8 2.4 2 0 0 2 2 2 1 Bromelain inhibitor VI DotA PF11388.8 NODE_46811_length_412_cov_79.832891_g38986_i0forward_frame_3 - 0.091 13.0 1.9 0.15 12.3 1.9 1.5 1 1 0 1 1 1 0 Phagosome trafficking protein DotA Formyl_trans_C PF02911.18 NODE_46809_length_412_cov_81.082228_g38984_i0reverse_frame_3 - 0.16 12.2 0.0 0.2 11.9 0.0 1.4 1 1 0 1 1 1 0 Formyl transferase, C-terminal domain AATF-Che1 PF13339.6 NODE_46808_length_412_cov_84.755968_g38983_i0reverse_frame_2 - 0.032 14.9 0.1 0.039 14.6 0.1 1.1 1 0 0 1 1 1 0 Apoptosis antagonizing transcription factor Vps36-NZF-N PF16988.5 NODE_46804_length_412_cov_93.994695_g38979_i0reverse_frame_3 - 0.062 12.7 0.1 0.13 11.7 0.1 1.4 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Ribosomal_L7Ae PF01248.26 NODE_46798_length_412_cov_104.275862_g38973_i0reverse_frame_2 - 9.8e-24 82.9 0.0 1.3e-23 82.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DPBB_1 PF03330.18 NODE_46798_length_412_cov_104.275862_g38973_i0reverse_frame_2 - 0.057 13.7 0.2 5.8 7.3 0.1 2.3 1 1 1 2 2 2 0 Lytic transglycolase Hydrolase_6 PF13344.6 NODE_46798_length_412_cov_104.275862_g38973_i0reverse_frame_2 - 0.059 13.5 0.0 0.079 13.1 0.0 1.2 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Gmx_para_CXXCG PF09535.10 NODE_46798_length_412_cov_104.275862_g38973_i0reverse_frame_2 - 0.21 10.8 1.1 11 5.3 0.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (Gmx_para_CXXCG) VanZ PF04892.12 NODE_46793_length_412_cov_138.108753_g38968_i0forward_frame_2 - 0.67 10.6 8.6 1.3 9.7 8.6 1.6 1 1 0 1 1 1 0 VanZ like family zf-LITAF-like PF10601.9 NODE_46781_length_412_cov_1062.061008_g38956_i0forward_frame_2 - 1.5e-12 47.6 12.7 1.9e-12 47.3 12.7 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain SHOCT PF09851.9 NODE_46777_length_413_cov_1.695767_g38954_i0forward_frame_3 - 0.094 12.5 0.1 0.094 12.5 0.1 2.1 3 0 0 3 3 3 0 Short C-terminal domain DUF2981 PF11200.8 NODE_46776_length_413_cov_1.753968_g38953_i0reverse_frame_3 - 0.012 15.4 0.7 0.015 15.0 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) DUF4034 PF13226.6 NODE_46771_length_413_cov_2.171958_g38948_i0forward_frame_3 - 0.16 11.3 0.1 0.21 10.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4034) Glyco_transf_4 PF13439.6 NODE_46768_length_413_cov_2.534392_g38945_i0reverse_frame_3 - 0.083 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase Family 4 DUF658 PF04936.12 NODE_46758_length_413_cov_44.835979_g38935_i0reverse_frame_2 - 0.035 13.8 1.0 0.3 10.8 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF658) Dsl1_N PF11988.8 NODE_46757_length_413_cov_45.912698_g38934_i0reverse_frame_3 - 0.0016 17.5 0.4 0.0019 17.2 0.4 1.1 1 0 0 1 1 1 1 Retrograde transport protein Dsl1 N terminal Paralemmin PF03285.15 NODE_46757_length_413_cov_45.912698_g38934_i0reverse_frame_3 - 0.023 14.3 0.2 0.028 14.0 0.2 1.2 1 0 0 1 1 1 0 Paralemmin Fzo_mitofusin PF04799.13 NODE_46757_length_413_cov_45.912698_g38934_i0reverse_frame_3 - 0.023 14.3 0.7 0.027 14.0 0.7 1.2 1 0 0 1 1 1 0 fzo-like conserved region Fungal_TACC PF12709.7 NODE_46757_length_413_cov_45.912698_g38934_i0reverse_frame_3 - 0.036 14.5 0.5 0.062 13.8 0.5 1.3 1 0 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins Csm1_N PF18504.1 NODE_46757_length_413_cov_45.912698_g38934_i0reverse_frame_3 - 0.065 13.6 1.0 0.12 12.7 1.0 1.4 1 0 0 1 1 1 0 Csm1 N-terminal domain Arc_PepC_II PF06847.11 NODE_46755_length_413_cov_69.513228_g38932_i0forward_frame_3 - 0.013 16.0 0.3 0.017 15.6 0.3 1.3 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II CNOT1_HEAT_N PF16419.5 NODE_46752_length_413_cov_72.716931_g38929_i0reverse_frame_3 - 0.068 12.8 0.8 0.09 12.4 0.8 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat DUF1157 PF06636.11 NODE_46752_length_413_cov_72.716931_g38929_i0reverse_frame_2 - 0.0077 15.1 2.0 0.0092 14.8 2.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1157) CN_hydrolase PF00795.22 NODE_46750_length_413_cov_74.219577_g38927_i0forward_frame_3 - 0.0088 15.4 0.0 0.0093 15.3 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF3254 PF11630.8 NODE_46750_length_413_cov_74.219577_g38927_i0forward_frame_3 - 0.03 14.5 0.1 0.052 13.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3254) DUF5399 PF17377.2 NODE_46740_length_413_cov_96.140212_g38917_i0reverse_frame_2 - 0.061 13.2 0.4 0.11 12.3 0.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5399) TRI9 PF08195.11 NODE_46739_length_413_cov_99.153439_g38916_i0forward_frame_3 - 0.016 15.1 0.8 0.099 12.5 0.1 2.1 2 0 0 2 2 2 0 TRI9 protein Ank_4 PF13637.6 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 1e-10 41.9 0.5 1.4e-06 28.7 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 6.4e-08 33.1 0.0 8.4e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 6.6e-06 26.3 0.1 0.004 17.5 0.1 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.00055 20.2 0.0 0.0014 18.9 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) DpnI PF06044.12 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.0048 16.5 0.0 0.0071 16.0 0.0 1.3 1 0 0 1 1 1 1 Dam-replacing family Ank_3 PF13606.6 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.017 15.6 0.0 0.075 13.6 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat EIF_2_alpha PF07541.12 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.07 13.2 0.0 0.15 12.2 0.0 1.6 1 1 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit ComGF PF15980.5 NODE_46733_length_413_cov_107.859788_g38910_i0reverse_frame_3 - 0.082 13.3 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 Putative Competence protein ComGF CENP-H PF05837.12 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.0027 18.1 0.2 0.0034 17.8 0.2 1.1 1 0 0 1 1 1 1 Centromere protein H (CENP-H) She9_MDM33 PF05546.11 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.0046 16.8 0.4 0.0061 16.4 0.4 1.1 1 0 0 1 1 1 1 She9 / Mdm33 family HAD_2 PF13419.6 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.026 14.6 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Fucokinase PF07959.12 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.033 13.1 0.1 0.041 12.8 0.1 1.1 1 0 0 1 1 1 0 L-fucokinase Jnk-SapK_ap_N PF09744.9 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.099 12.9 4.4 0.14 12.4 4.4 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Pex24p PF06398.11 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.13 11.3 0.1 0.14 11.1 0.1 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin PAH PF02671.21 NODE_46731_length_413_cov_111.841270_g38908_i0reverse_frame_3 - 0.65 10.2 2.6 1.5 9.0 2.6 1.6 1 1 0 1 1 1 0 Paired amphipathic helix repeat AidB_N PF18158.1 NODE_46725_length_413_cov_124.642857_g38902_i0forward_frame_3 - 0.079 12.9 0.2 0.1 12.6 0.2 1.1 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain FtsJ PF01728.19 NODE_46723_length_413_cov_136.375661_g38900_i0reverse_frame_2 - 2.5e-06 27.7 0.1 4.4e-06 26.9 0.1 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase BDV_M PF16520.5 NODE_46720_length_413_cov_154.650794_g29356_i1reverse_frame_2 - 0.081 13.3 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae MORN PF02493.20 NODE_46717_length_413_cov_160.047619_g38895_i0forward_frame_3 - 1.9e-11 43.1 3.8 6.9e-06 25.6 0.8 2.6 2 0 0 2 2 2 2 MORN repeat Ribosomal_L22e PF01776.17 NODE_46716_length_413_cov_161.193122_g38894_i0reverse_frame_3 - 2.7e-45 153.2 1.7 3.3e-45 152.9 1.7 1.0 1 0 0 1 1 1 1 Ribosomal L22e protein family Avian_gp85 PF03708.14 NODE_46714_length_413_cov_165.124339_g38892_i0reverse_frame_3 - 0.0037 16.5 0.3 0.0041 16.3 0.3 1.1 1 0 0 1 1 1 1 Avian retrovirus envelope protein, gp85 Trehalase PF01204.18 NODE_46714_length_413_cov_165.124339_g38892_i0reverse_frame_2 - 1.3e-20 73.8 0.2 1.7e-20 73.4 0.2 1.1 1 0 0 1 1 1 1 Trehalase Glyco_hydro_63 PF03200.16 NODE_46714_length_413_cov_165.124339_g38892_i0reverse_frame_2 - 0.00042 19.2 0.0 0.00053 18.9 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 63 C-terminal domain MDMPI_C PF07398.11 NODE_46714_length_413_cov_165.124339_g38892_i0reverse_frame_2 - 0.045 14.6 0.1 0.12 13.3 0.1 1.8 1 1 0 1 1 1 0 MDMPI C-terminal domain GPR15L PF15854.5 NODE_46713_length_413_cov_168.116402_g38891_i0reverse_frame_2 - 0.07 13.4 5.8 0.15 12.3 4.4 1.9 2 0 0 2 2 2 0 G-protein coupled receptor ligand 15 MGC-24 PF05283.11 NODE_46710_length_413_cov_224.134921_g38888_i0forward_frame_3 - 0.28 11.6 6.5 0.37 11.3 6.5 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Fer2 PF00111.27 NODE_46710_length_413_cov_224.134921_g38888_i0forward_frame_3 - 9 6.3 8.4 2.1 8.4 0.6 2.3 1 1 1 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain RNF111_N PF15303.6 NODE_46706_length_413_cov_357.841270_g38884_i0reverse_frame_3 - 0.0046 16.8 0.8 0.0052 16.6 0.8 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase Arkadia N-terminus baeRF_family7 PF18849.1 NODE_46696_length_414_cov_1.258575_g38877_i0reverse_frame_3 - 0.14 12.4 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 7 SWIRM PF04433.17 NODE_46696_length_414_cov_1.258575_g38877_i0forward_frame_3 - 0.014 15.7 0.4 0.024 15.0 0.4 1.4 1 0 0 1 1 1 0 SWIRM domain zf-RING_2 PF13639.6 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 1.1e-05 25.7 3.0 2.3e-05 24.6 3.0 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.00027 20.7 2.9 0.00069 19.4 2.9 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.00041 20.6 4.3 0.00071 19.8 4.3 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.0015 18.3 1.9 0.0015 18.3 1.9 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.0016 18.2 7.4 0.0023 17.6 6.2 1.9 2 0 0 2 2 2 1 RING-like zinc finger Prok-RING_1 PF14446.6 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.0046 16.9 2.0 0.0084 16.0 2.0 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 zf-RING_UBOX PF13445.6 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.0051 16.8 1.9 0.013 15.5 1.9 1.7 1 0 0 1 1 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.0054 16.3 2.2 0.012 15.2 2.2 1.6 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.008 16.1 3.6 0.017 15.0 3.6 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.024 14.7 0.9 0.042 13.9 0.9 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Neur_chan_memb PF02932.16 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.031 14.3 0.0 0.032 14.3 0.0 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region FANCL_C PF11793.8 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 0.18 12.0 5.5 0.67 10.2 5.6 2.0 1 1 1 2 2 2 0 FANCL C-terminal domain DUF5527 PF17665.1 NODE_46691_length_414_cov_1.875989_g38872_i0reverse_frame_3 - 1.1 8.8 3.9 1.9 8.0 3.9 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5527) zf-TFIIIC PF12660.7 NODE_46691_length_414_cov_1.875989_g38872_i0forward_frame_3 - 0.066 13.2 7.8 0.1 12.6 7.3 1.5 1 1 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex Tho2 PF11262.8 NODE_46682_length_414_cov_2.696570_g38863_i0reverse_frame_2 - 0.067 12.4 0.2 0.077 12.2 0.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF2156 PF09924.9 NODE_46682_length_414_cov_2.696570_g38863_i0reverse_frame_2 - 0.12 11.3 0.0 0.17 10.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2156) SSB PF00436.25 NODE_46681_length_414_cov_2.704485_g38862_i0reverse_frame_3 - 0.032 14.3 0.0 0.045 13.8 0.0 1.3 1 0 0 1 1 1 0 Single-strand binding protein family Phospholamban PF04272.14 NODE_46681_length_414_cov_2.704485_g38862_i0reverse_frame_2 - 0.063 12.8 0.1 0.13 11.8 0.1 1.5 1 0 0 1 1 1 0 Phospholamban VESA1_N PF12785.7 NODE_46678_length_414_cov_3.058047_g38859_i0forward_frame_2 - 0.11 11.4 5.3 0.13 11.2 5.3 1.1 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 HicA_toxin PF07927.12 NODE_46675_length_414_cov_8.277045_g38856_i0reverse_frame_3 - 0.6 10.2 2.9 2 8.5 0.5 2.5 2 1 0 2 2 2 0 HicA toxin of bacterial toxin-antitoxin, IPTL-CTERM PF18203.1 NODE_46675_length_414_cov_8.277045_g38856_i0forward_frame_2 - 0.044 13.7 2.7 0.044 13.7 2.7 2.2 3 0 0 3 3 3 0 IPTL-CTERM motif Defensin_1 PF00323.19 NODE_46668_length_414_cov_71.266491_g38849_i0reverse_frame_2 - 0.12 13.0 1.9 0.16 12.6 0.1 2.2 2 0 0 2 2 2 0 Mammalian defensin Diphtheria_R PF01324.19 NODE_46668_length_414_cov_71.266491_g38849_i0forward_frame_2 - 0.3 10.7 0.4 0.89 9.2 0.1 1.7 1 1 1 2 2 2 0 Diphtheria toxin, R domain zf-RING_11 PF17123.5 NODE_46660_length_414_cov_96.002639_g38842_i0reverse_frame_2 - 0.0086 15.8 0.6 0.0086 15.8 0.6 1.8 2 0 0 2 2 2 1 RING-like zinc finger DUF3772 PF12607.8 NODE_46659_length_414_cov_96.564644_g38841_i0forward_frame_3 - 6.4 6.6 10.7 2.1 8.1 5.8 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3772) Utp12 PF04003.12 NODE_46647_length_414_cov_323.087071_g38829_i0reverse_frame_2 - 0.068 13.5 2.0 0.1 12.9 2.0 1.4 1 1 0 1 1 1 0 Dip2/Utp12 Family AgrB PF04647.15 NODE_46639_length_414_cov_1888.860158_g38822_i0forward_frame_3 - 0.38 10.0 2.3 0.55 9.5 2.3 1.2 1 0 0 1 1 1 0 Accessory gene regulator B Glycolytic PF00274.19 NODE_46639_length_414_cov_1888.860158_g38822_i0forward_frame_2 - 5.2e-05 22.1 0.1 6.9e-05 21.7 0.1 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Popeye PF04831.13 NODE_46638_length_414_cov_3151.435356_g38821_i0reverse_frame_3 - 9.3 6.4 9.9 12 6.0 9.9 1.2 1 0 0 1 1 1 0 Popeye protein conserved region DUF4569 PF15133.6 NODE_46638_length_414_cov_3151.435356_g38821_i0forward_frame_3 - 0.0014 18.4 1.5 0.0017 18.2 1.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4569) Ribonuc_L-PSP PF01042.21 ORF99144 - 1e-32 112.7 0.1 1.1e-32 112.5 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF4181 PF13789.6 ORF96655 - 1.1 9.5 5.6 6.4 7.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4181) HutD PF05962.11 ORF94315 - 2.1e-21 76.7 0.1 2.4e-21 76.5 0.1 1.0 1 0 0 1 1 1 1 HutD MORN PF02493.20 ORF91704 - 3.8e-31 105.1 45.1 6e-09 35.3 6.2 6.1 6 0 0 6 6 6 5 MORN repeat Ribosomal_S25 PF03297.15 ORF90269 - 1.9e-28 98.6 2.2 1.9e-28 98.6 2.2 2.1 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 ORF90269 - 0.0074 15.9 0.6 0.0091 15.6 0.6 1.2 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 ORF90269 - 0.065 12.9 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 ORF90269 - 0.3 11.5 6.8 13 6.2 6.8 2.2 1 1 0 1 1 1 0 Recombinase HAS-barrel PF09378.10 ORF88782 - 0.2 11.9 0.0 1.1 9.5 0.0 1.8 2 0 0 2 2 2 0 HAS barrel domain ArfGap PF01412.18 ORF88153 - 0.16 12.1 3.5 0.15 12.1 1.8 1.8 2 1 0 2 2 2 0 Putative GTPase activating protein for Arf DUF3487 PF11990.8 ORF87714 - 0.035 14.0 2.4 0.049 13.5 2.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3487) HMGL-like PF00682.19 ORF86917 - 1.8e-15 57.2 0.0 2.2e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 HMGL-like DUF1804 PF08822.11 ORF86917 - 0.096 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) SET PF00856.28 ORF84296 - 0.0065 16.9 0.1 0.021 15.2 0.0 1.7 2 0 0 2 2 2 1 SET domain CAV_VP3 PF04771.12 ORF84246 - 0.2 11.8 5.0 0.13 12.4 1.6 2.0 1 1 1 2 2 2 0 Chicken anaemia virus VP-3 protein DUF3551 PF12071.8 ORF83764 - 0.049 13.7 2.7 0.078 13.0 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3551) Pkinase PF00069.25 ORF83287 - 3.6e-38 131.4 1.7 4e-38 131.3 1.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83287 - 5.8e-23 81.5 0.1 6.4e-23 81.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF83287 - 0.00034 20.3 0.7 0.00044 19.9 0.7 1.2 1 0 0 1 1 1 1 RIO1 family FTA2 PF13095.6 ORF83287 - 0.0039 16.8 0.9 1.9 8.1 0.1 2.1 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF83287 - 0.093 12.6 0.0 5 7.0 0.0 2.0 1 1 1 2 2 2 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF83287 - 0.095 12.0 0.3 0.18 11.1 0.3 1.6 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pap_E4 PF02711.14 ORF82517 - 0.84 10.6 4.6 0.46 11.5 0.6 2.0 2 0 0 2 2 2 0 E4 protein PWI PF01480.17 ORF82240 - 8.2e-05 22.9 0.8 0.00012 22.3 0.8 1.3 1 0 0 1 1 1 1 PWI domain NaeI PF09126.10 ORF82240 - 0.043 13.0 0.4 0.052 12.7 0.4 1.1 1 0 0 1 1 1 0 Restriction endonuclease NaeI Myticin-prepro PF10690.9 ORF8169 - 0.081 13.2 0.4 5.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel DAP10 PF07213.11 ORF8169 - 0.11 12.4 1.5 0.29 11.1 0.1 2.1 2 1 1 3 3 3 0 DAP10 membrane protein CAP PF00188.26 ORF81582 - 0.0086 16.9 0.1 0.012 16.4 0.1 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family Kei1 PF08552.11 ORF81515 - 0.026 14.4 0.1 0.033 14.1 0.1 1.2 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 SNARE_assoc PF09335.11 ORF81474 - 0.00052 20.5 0.3 0.12 12.8 1.1 2.1 2 0 0 2 2 2 1 SNARE associated Golgi protein Connexin PF00029.19 ORF81474 - 0.00072 19.4 0.8 0.00096 19.0 0.8 1.1 1 0 0 1 1 1 1 Connexin DUF4834 PF16118.5 ORF81474 - 0.004 18.1 0.4 0.0064 17.4 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) Serinc PF03348.15 ORF81474 - 0.0041 16.1 0.3 0.0047 15.9 0.3 1.1 1 0 0 1 1 1 1 Serine incorporator (Serinc) Nucleoside_tran PF01733.18 ORF81474 - 0.0061 16.0 0.4 0.0069 15.8 0.4 1.2 1 0 0 1 1 1 1 Nucleoside transporter FAM176 PF14851.6 ORF81474 - 0.008 15.8 1.2 0.01 15.5 1.2 1.2 1 0 0 1 1 1 1 FAM176 family DUF4407 PF14362.6 ORF81474 - 0.0083 15.5 0.3 0.0087 15.4 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Orthopox_A36R PF05950.11 ORF81474 - 0.01 16.0 0.0 0.016 15.4 0.0 1.3 1 0 0 1 1 1 0 Orthopoxvirus A36R protein DUF3169 PF11368.8 ORF81474 - 0.01 15.4 0.5 0.013 15.1 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3169) SID-1_RNA_chan PF13965.6 ORF81474 - 0.012 14.1 0.5 0.013 13.9 0.5 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 V_ATPase_I PF01496.19 ORF81474 - 0.013 13.4 1.1 0.015 13.2 1.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Ureide_permease PF07168.11 ORF81474 - 0.014 14.1 0.3 0.017 13.9 0.3 1.1 1 0 0 1 1 1 0 Ureide permease DUF4199 PF13858.6 ORF81474 - 0.017 15.5 0.3 0.032 14.6 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Presenilin PF01080.17 ORF81474 - 0.029 13.1 0.3 0.028 13.2 0.3 1.2 1 0 0 1 1 1 0 Presenilin Acatn PF13000.7 ORF81474 - 0.047 12.2 0.1 0.053 12.0 0.1 1.1 1 0 0 1 1 1 0 Acetyl-coenzyme A transporter 1 CLN3 PF02487.17 ORF81474 - 0.052 12.6 0.3 0.072 12.1 0.3 1.1 1 0 0 1 1 1 0 CLN3 protein OATP PF03137.20 ORF81474 - 0.056 11.7 0.1 0.056 11.7 0.1 1.5 2 0 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family G0-G1_switch_2 PF15103.6 ORF81474 - 0.063 13.7 4.8 0.12 12.8 4.8 1.6 1 1 0 1 1 1 0 G0/G1 switch protein 2 Vpu PF00558.19 ORF81474 - 0.12 12.1 2.3 0.17 11.7 2.0 1.4 1 1 0 1 1 1 0 Vpu protein CSG2 PF16965.5 ORF81474 - 0.12 11.3 0.2 0.14 11.0 0.2 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator EIIBC-GUT_N PF03612.14 ORF81474 - 0.12 12.1 6.0 0.18 11.5 6.0 1.2 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus TMEM171 PF15471.6 ORF81474 - 0.14 11.1 0.9 0.18 10.8 0.1 1.5 1 1 1 2 2 2 0 Transmembrane protein family 171 TFB6 PF17110.5 ORF81474 - 0.27 11.0 5.9 0.35 10.6 5.9 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH MAS20 PF02064.15 ORF81474 - 0.35 11.0 6.1 0.51 10.4 6.1 1.2 1 0 0 1 1 1 0 MAS20 protein import receptor DUF2681 PF10883.8 ORF81474 - 0.46 10.9 9.8 1.1 9.7 9.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2681) NARP1 PF12569.8 ORF81474 - 4 6.2 12.0 4.5 6.1 12.0 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Pox_Ag35 PF03286.14 ORF81474 - 5.9 6.6 13.9 7.7 6.3 13.9 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein SHR3_chaperone PF08229.11 ORF81474 - 6.5 5.7 9.1 20 4.1 8.8 1.9 1 1 0 1 1 1 0 ER membrane protein SH3 HMG_box PF00505.19 ORF79506 - 1.6e-18 66.9 6.5 1.6e-18 66.9 6.5 1.9 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF79506 - 3.1e-12 46.9 4.8 3.1e-12 46.9 4.8 2.2 2 1 0 2 2 2 1 HMG-box domain YABBY PF04690.13 ORF79506 - 4.1 8.0 16.5 0.13 12.9 7.3 2.0 1 1 1 2 2 2 0 YABBY protein Penicil_amidase PF01804.18 ORF79422 - 2e-21 76.7 0.0 2.2e-21 76.5 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase YfzA PF14118.6 ORF79418 - 0.44 11.0 4.5 5.4 7.5 0.2 2.3 1 1 1 2 2 2 0 YfzA-like protein zf-A20 PF01754.16 ORF78844 - 0.029 14.3 0.3 0.19 11.7 0.1 2.2 2 0 0 2 2 2 0 A20-like zinc finger DUF2633 PF11119.8 ORF77702 - 4.7 7.2 6.6 0.59 10.1 1.6 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2633) DUF667 PF05018.13 ORF76354 - 0.012 15.4 0.1 0.018 14.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF667) Qn_am_d_aIV PF09100.10 ORF74295 - 0.17 11.7 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV DUF2583 PF10762.9 ORF72057 - 0.12 12.8 0.4 0.2 12.1 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2583) Inovirus_Gp2 PF11726.8 ORF70123 - 0.028 14.4 1.4 0.028 14.4 1.4 1.6 1 1 1 2 2 2 0 Inovirus Gp2 GCSF PF16647.5 ORF69584 - 1.1 9.1 7.5 1.6 8.6 7.5 1.2 1 0 0 1 1 1 0 Granulocyte colony-stimulating factor Inositol_P PF00459.25 ORF69238 - 0.058 12.9 0.8 0.062 12.8 0.8 1.2 1 0 0 1 1 1 0 Inositol monophosphatase family BK_channel_a PF03493.18 ORF69238 - 0.095 12.9 0.3 0.16 12.2 0.3 1.5 1 1 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit PGK PF00162.19 ORF6912 - 0.16 10.8 0.9 0.21 10.5 0.9 1.1 1 0 0 1 1 1 0 Phosphoglycerate kinase DUF1815 PF08844.10 ORF68515 - 0.036 14.0 0.2 0.092 12.7 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1815) DUF2102 PF09875.9 ORF66310 - 0.19 11.5 1.4 0.38 10.5 1.4 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) U83 PF17465.2 ORF66252 - 0.011 15.8 1.5 0.013 15.6 0.2 1.7 2 0 0 2 2 2 0 Chemokine-like protein, HHV-6 U83 gene product Crust_neurohorm PF01147.17 ORF64774 - 0.7 9.8 4.4 0.6 10.0 1.0 2.1 2 0 0 2 2 2 0 Crustacean CHH/MIH/GIH neurohormone family Ribosomal_L7Ae PF01248.26 ORF63030 - 2.4e-20 72.0 0.1 3.7e-20 71.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Fer4_11 PF13247.6 ORF63030 - 0.04 14.0 0.0 0.06 13.5 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Forkhead PF00250.18 ORF62663 - 0.085 13.1 0.9 0.12 12.7 0.9 1.3 1 0 0 1 1 1 0 Forkhead domain MORN PF02493.20 ORF62068 - 3.8e-31 105.1 45.1 6e-09 35.3 6.2 6.1 6 0 0 6 6 6 5 MORN repeat LCE6A PF15858.5 ORF61732 - 0.041 14.6 5.3 0.041 14.6 5.3 2.0 2 1 0 2 2 2 0 Late cornified envelope protein 6A family Ribosomal_S25 PF03297.15 ORF61174 - 1.9e-28 98.6 2.2 1.9e-28 98.6 2.2 2.0 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 ORF61174 - 0.0073 15.9 0.5 0.009 15.6 0.5 1.1 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 ORF61174 - 0.066 12.9 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 ORF61174 - 0.22 11.9 6.0 10 6.6 6.0 2.2 1 1 0 1 1 1 0 Recombinase Monellin PF09200.10 ORF60671 - 0.13 12.1 0.1 0.32 10.9 0.1 1.7 1 0 0 1 1 1 0 Monellin Homoserine_dh PF00742.19 ORF57462 - 6.4e-22 78.3 0.0 7.7e-22 78.0 0.0 1.0 1 0 0 1 1 1 1 Homoserine dehydrogenase DUF3969 PF13108.6 ORF56435 - 0.071 13.1 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3969) zf-RING_11 PF17123.5 ORF56336 - 5.5 6.8 11.8 14 5.5 0.4 3.5 3 0 0 3 3 3 0 RING-like zinc finger PUF PF00806.19 ORF55664 - 1.9e-10 39.8 1.2 0.00017 21.1 0.4 3.4 2 1 0 3 3 3 2 Pumilio-family RNA binding repeat DUF1904 PF08921.11 ORF55664 - 0.05 13.9 1.1 0.068 13.5 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1904) ACDC PF14733.6 ORF55664 - 0.07 13.4 0.6 0.07 13.4 0.6 1.8 2 0 0 2 2 2 0 AP2-coincident C-terminal DUF4592 PF15262.6 ORF54539 - 0.032 14.9 1.3 0.043 14.5 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4592) Adeno_E3_CR2 PF02439.15 ORF54449 - 0.15 11.9 1.1 0.25 11.1 1.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Flu_M2 PF00599.17 ORF54449 - 0.38 10.9 3.2 14 5.9 0.1 2.2 1 1 1 2 2 2 0 Influenza Matrix protein (M2) Ribosomal_S25 PF03297.15 ORF53432 - 1.9e-28 98.6 2.2 1.9e-28 98.6 2.2 2.1 2 0 0 2 2 2 1 S25 ribosomal protein Peptidase_S41 PF03572.18 ORF53432 - 0.0074 15.9 0.6 0.0091 15.6 0.6 1.2 1 0 0 1 1 1 1 Peptidase family S41 GntR PF00392.21 ORF53432 - 0.065 12.9 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family Recombinase PF07508.13 ORF53432 - 0.3 11.5 6.8 13 6.2 6.8 2.2 1 1 0 1 1 1 0 Recombinase KCNQ2_u3 PF16642.5 ORF52332 - 1.3 10.1 8.1 3 8.9 2.7 2.2 1 1 1 2 2 2 0 Unstructured region on Potassium channel subunit alpha KvLQT2 Pap_E4 PF02711.14 ORF52332 - 6.6 7.8 7.5 60 4.7 7.5 2.1 1 1 0 1 1 1 0 E4 protein AAA_11 PF13086.6 ORF51694 - 0.00012 21.9 0.0 0.00015 21.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF51694 - 0.0011 19.3 0.0 0.0016 18.8 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF51694 - 0.0016 18.2 0.1 0.002 17.9 0.1 1.2 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF51694 - 0.0017 18.1 0.0 0.0022 17.7 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_19 PF13245.6 ORF51694 - 0.0069 16.7 0.1 0.011 16.1 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 ORF51694 - 0.047 13.2 0.0 0.069 12.7 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Viral_helicase1 PF01443.18 ORF51694 - 0.061 13.1 0.0 0.079 12.7 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 ORF51694 - 0.063 13.6 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 ORF51694 - 0.083 12.3 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 ORF51694 - 0.093 13.1 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_5 PF07728.14 ORF51694 - 0.1 12.6 0.0 0.22 11.5 0.0 1.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) HGWP PF03578.15 ORF51694 - 0.14 11.7 0.0 0.25 10.9 0.0 1.3 1 0 0 1 1 1 0 HGWP repeat DUF2075 PF09848.9 ORF51694 - 0.23 10.7 0.0 0.32 10.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RNA12 PF10443.9 ORF51694 - 0.27 9.9 0.0 0.37 9.5 0.0 1.1 1 0 0 1 1 1 0 RNA12 protein UvrD-helicase PF00580.21 ORF51694 - 0.31 10.5 0.0 0.39 10.2 0.0 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain SVIP PF15811.5 ORF50238 - 0.01 16.3 2.7 0.01 16.3 2.7 2.3 2 0 0 2 2 2 0 Small VCP/p97-interacting protein FAM47 PF14642.6 ORF50238 - 0.13 11.8 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 FAM47 family SVIP PF15811.5 ORF49898 - 0.01 16.3 2.7 0.01 16.3 2.7 2.3 2 0 0 2 2 2 0 Small VCP/p97-interacting protein FAM47 PF14642.6 ORF49898 - 0.13 11.8 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 FAM47 family Tab2_like PF06485.11 ORF49892 - 0.021 14.4 0.0 0.021 14.4 0.0 1.1 1 0 0 1 1 1 0 RNA-binding protein Tab2/Atab2 LuxS PF02664.15 ORF49892 - 0.049 13.3 0.0 0.067 12.9 0.0 1.2 1 0 0 1 1 1 0 S-Ribosylhomocysteinase (LuxS) PUF PF00806.19 ORF49436 - 1.9e-10 39.8 1.2 0.00017 21.1 0.4 3.4 2 1 0 3 3 3 2 Pumilio-family RNA binding repeat DUF1904 PF08921.11 ORF49436 - 0.05 13.9 1.1 0.068 13.5 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1904) ACDC PF14733.6 ORF49436 - 0.07 13.4 0.6 0.07 13.4 0.6 1.8 2 0 0 2 2 2 0 AP2-coincident C-terminal Gemini_V2 PF01524.17 ORF49215 - 0.11 12.7 0.9 0.16 12.1 0.2 1.7 2 1 0 2 2 2 0 Geminivirus V2 protein SVIP PF15811.5 ORF46398 - 0.01 16.3 2.7 0.01 16.3 2.7 2.3 2 0 0 2 2 2 0 Small VCP/p97-interacting protein FAM47 PF14642.6 ORF46398 - 0.13 11.8 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 FAM47 family Sec34 PF04136.15 ORF45330 - 0.015 15.2 1.7 0.3 11.0 0.1 2.1 2 0 0 2 2 2 0 Sec34-like family Glu_synthase PF01645.17 ORF45330 - 0.074 12.2 0.4 0.087 11.9 0.4 1.1 1 0 0 1 1 1 0 Conserved region in glutamate synthase CCDC-167 PF15188.6 ORF45330 - 0.13 12.6 3.0 0.67 10.3 0.3 2.5 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 CHIP_TPR_N PF18391.1 ORF45330 - 0.27 12.0 5.1 1 10.2 0.5 2.4 2 1 0 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain UcrQ PF02939.16 ORF45185 - 0.14 12.2 0.0 0.28 11.1 0.0 1.6 1 0 0 1 1 1 0 UcrQ family SeqA PF03925.13 ORF40415 - 0.00062 19.7 2.5 0.94 9.5 0.0 2.9 2 1 1 3 3 3 2 SeqA protein C-terminal domain Preseq_ALAS PF09029.10 ORF40415 - 0.025 15.1 2.9 4.6 7.8 0.5 3.4 1 1 2 3 3 3 0 5-aminolevulinate synthase presequence CD20 PF04103.15 ORF40415 - 0.032 14.3 2.2 1.7 8.7 0.0 3.0 3 1 0 3 3 3 0 CD20-like family Aft1_OSA PF11785.8 ORF4032 - 0.068 13.6 0.1 0.14 12.6 0.1 1.6 1 0 0 1 1 1 0 Aft1 osmotic stress response (OSM) domain NUDE_C PF04880.13 ORF39710 - 0.26 11.7 2.3 0.33 11.4 2.3 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Filament PF00038.21 ORF37902 - 0.0022 17.6 0.6 0.0028 17.3 0.6 1.0 1 0 0 1 1 1 1 Intermediate filament protein BAR PF03114.18 ORF37902 - 0.012 15.2 0.1 0.013 15.1 0.1 1.1 1 0 0 1 1 1 0 BAR domain KfrA_N PF11740.8 ORF37902 - 0.024 15.3 1.6 0.032 14.9 1.6 1.3 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term DUF4407 PF14362.6 ORF37902 - 0.033 13.5 0.0 0.038 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ISG65-75 PF11727.8 ORF37902 - 0.037 13.3 0.0 0.049 12.9 0.0 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein phiKZ_IP PF12699.7 ORF37902 - 0.15 11.2 0.1 0.18 10.9 0.1 1.0 1 0 0 1 1 1 0 phiKZ-like phage internal head proteins DUF948 PF06103.11 ORF37902 - 0.17 12.1 0.2 0.33 11.2 0.2 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) FlaG PF03646.15 ORF37902 - 0.18 12.0 2.1 0.28 11.4 2.1 1.2 1 0 0 1 1 1 0 FlaG protein FTA2 PF13095.6 ORF36037 - 0.042 13.5 0.0 0.06 13.0 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Phe_hydrox_dim PF07976.12 ORF33620 - 0.0004 20.5 0.3 0.00041 20.4 0.3 1.0 1 0 0 1 1 1 1 Phenol hydroxylase, C-terminal dimerisation domain zf-RING_5 PF14634.6 ORF33124 - 3.3 7.8 5.8 0.37 10.8 1.3 1.7 2 0 0 2 2 2 0 zinc-RING finger domain DUF2633 PF11119.8 ORF31940 - 4.7 7.2 6.6 0.59 10.1 1.6 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2633) DUF5082 PF16888.5 ORF30950 - 0.00043 20.6 2.7 0.00043 20.6 2.7 2.1 1 1 0 2 2 2 1 Domain of unknown function (DUF5082) DivIC PF04977.15 ORF30950 - 0.013 15.3 9.0 0.044 13.6 1.5 2.2 2 0 0 2 2 2 0 Septum formation initiator CCDC92 PF14916.6 ORF30950 - 0.028 14.2 1.1 0.028 14.2 1.1 2.4 2 1 1 3 3 3 0 Coiled-coil domain of unknown function FlaC_arch PF05377.11 ORF30950 - 0.058 13.8 8.9 0.075 13.4 1.5 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) HTH_25 PF13413.6 ORF30950 - 0.065 13.1 0.7 0.22 11.4 0.1 2.3 2 1 1 3 3 3 0 Helix-turn-helix domain bZIP_1 PF00170.21 ORF30950 - 0.13 12.3 11.4 1.3 9.1 2.2 2.5 2 0 0 2 2 2 0 bZIP transcription factor PRKG1_interact PF15898.5 ORF30950 - 0.16 12.9 9.8 0.26 12.2 9.7 1.5 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Shugoshin_N PF07558.11 ORF30950 - 0.16 11.9 6.2 1 9.3 0.2 2.4 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region bZIP_2 PF07716.15 ORF30950 - 0.58 10.3 10.3 1.4 9.0 1.1 2.9 2 1 0 2 2 2 0 Basic region leucine zipper APG6_N PF17675.1 ORF30950 - 0.72 10.4 17.0 0.55 10.8 11.8 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region TSC22 PF01166.18 ORF30950 - 1.1 9.6 11.0 7.4 7.0 2.8 3.1 1 1 2 3 3 3 0 TSC-22/dip/bun family TM231 PF10149.9 ORF30950 - 1.5 8.1 4.9 6.2 6.1 0.9 2.0 2 0 0 2 2 2 0 Transmembrane protein 231 ZapB PF06005.12 ORF30950 - 2.5 8.6 16.9 2 8.9 6.4 2.6 1 1 1 2 2 2 0 Cell division protein ZapB YabA PF06156.13 ORF30950 - 2.7 8.7 12.7 1.5 9.5 2.1 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF5320 PF17253.2 ORF30950 - 3.9 8.6 4.2 26 6.0 0.7 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) TMF_DNA_bd PF12329.8 ORF30950 - 10 6.2 20.0 2.7 8.1 3.0 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Aa_trans PF01490.18 ORF30201 - 1.9e-08 33.4 10.6 2e-08 33.4 10.6 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein U-box PF04564.15 ORF30003 - 8.9e-19 67.5 0.0 2.6e-18 66.0 0.0 1.7 2 0 0 2 2 2 1 U-box domain zf-Nse PF11789.8 ORF30003 - 1.5e-06 27.9 0.0 2.4e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 ORF30003 - 0.00013 21.9 0.0 0.00019 21.4 0.0 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-NOSIP PF15906.5 ORF30003 - 0.0069 16.5 0.0 0.0096 16.0 0.0 1.3 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein DUF4064 PF13273.6 ORF30003 - 0.039 14.2 0.0 0.051 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) zf-C3HC4_4 PF15227.6 ORF30003 - 0.14 12.3 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING KIAA1430 PF13879.6 ORF27699 - 2.7e-12 47.3 7.6 2.7e-12 47.3 7.6 2.0 2 0 0 2 2 2 1 KIAA1430 homologue PSI_integrin PF17205.3 ORF2749 - 1.9 8.3 12.7 4.9 7.0 12.8 1.8 1 1 0 1 1 1 0 Integrin plexin domain Adenylsucc_synt PF00709.21 ORF25845 - 0.14 11.1 0.1 0.15 10.9 0.1 1.1 1 0 0 1 1 1 0 Adenylosuccinate synthetase GPR15L PF15854.5 ORF24621 - 0.012 15.9 2.2 0.14 12.4 0.4 2.2 1 1 0 2 2 2 0 G-protein coupled receptor ligand 15 PP2C PF00481.21 ORF2366 - 3.6e-12 46.5 0.0 4e-12 46.3 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF2366 - 0.01 15.8 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks189.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks189.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks189.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks189.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3584 PF12128.8 ORF124651 - 0.028 11.9 9.7 0.023 12.2 6.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) DDE_Tnp_1_7 PF13843.6 ORF124651 - 0.057 12.7 0.1 0.091 12.0 0.1 1.2 1 0 0 1 1 1 0 Transposase IS4 BshC PF10079.9 ORF124651 - 0.33 9.6 5.3 3.1 6.4 1.5 2.3 2 0 0 2 2 2 0 Bacillithiol biosynthesis BshC Snapin_Pallidin PF14712.6 ORF124651 - 0.88 10.0 7.1 0.38 11.2 0.2 3.4 2 2 1 3 3 3 0 Snapin/Pallidin Apolipoprotein PF01442.18 ORF124651 - 1 9.2 21.5 0.25 11.2 13.7 2.7 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain Fzo_mitofusin PF04799.13 ORF124651 - 9.7 5.7 7.0 2.3 7.7 2.4 2.3 2 1 1 3 3 3 0 fzo-like conserved region p450 PF00067.22 ORF85991 - 3.8e-49 167.7 0.1 4.7e-49 167.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 p450 PF00067.22 ORF65907 - 9.3e-50 169.7 0.1 1.3e-49 169.2 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Biotin_lipoyl_2 PF13533.6 ORF65907 - 0.1 12.4 0.0 5.5 6.9 0.0 2.4 2 0 0 2 2 2 0 Biotin-lipoyl like YopD PF05844.12 ORF49510 - 0.033 13.2 1.2 0.054 12.5 1.2 1.3 1 0 0 1 1 1 0 YopD protein MIEAP PF16026.5 ORF49510 - 0.063 13.5 11.0 0.27 11.4 0.2 4.1 3 2 0 3 3 3 0 Mitochondria-eating protein DS PF01916.17 ORF49510 - 0.071 12.3 0.3 0.14 11.3 0.3 1.5 1 0 0 1 1 1 0 Deoxyhypusine synthase ATP-cone PF03477.16 ORF49510 - 0.081 13.5 1.5 0.43 11.2 1.5 2.3 1 0 0 1 1 1 0 ATP cone domain DUF445 PF04286.12 ORF49510 - 0.089 12.6 11.4 0.033 14.0 6.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF445) Ku_PK_bind PF08785.11 ORF49510 - 0.11 12.6 5.6 0.08 13.1 0.6 2.9 2 1 1 3 3 3 0 Ku C terminal domain like Snf7 PF03357.21 ORF49510 - 1.4 8.5 9.0 0.22 11.1 3.2 2.4 2 0 0 2 2 2 0 Snf7 HPS3_C PF14763.6 ORF46996 - 0.12 11.7 0.6 0.18 11.1 0.6 1.2 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3, C-terminal Abhydrolase_3 PF07859.13 ORF43085 - 2.2e-33 115.9 0.0 1.1e-32 113.6 0.0 1.9 2 0 0 2 2 2 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF43085 - 2e-07 30.2 0.0 1.6e-06 27.3 0.0 2.2 1 1 0 1 1 1 1 Steryl acetyl hydrolase NTNH_C PF08470.10 ORF43085 - 0.0041 17.0 0.5 1.2 9.0 0.0 2.6 2 0 0 2 2 2 2 Nontoxic nonhaemagglutinin C-terminal Apolipoprotein PF01442.18 ORF35903 - 6.8e-05 22.8 34.6 0.00032 20.6 11.8 3.9 1 1 1 2 2 2 1 Apolipoprotein A1/A4/E domain Cauli_DNA-bind PF03310.13 ORF35903 - 0.015 15.4 6.6 0.015 15.4 6.6 4.1 1 1 2 3 3 3 0 Caulimovirus DNA-binding protein Baculo_PEP_C PF04513.12 ORF35903 - 0.019 15.0 23.4 0.29 11.2 2.0 4.6 3 1 2 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4736 PF15883.5 ORF35903 - 0.63 9.7 3.4 2.7 7.7 2.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4736) YtxH PF12732.7 ORF35903 - 1.1 9.8 54.1 7.8 7.1 13.7 5.8 2 2 2 4 4 4 0 YtxH-like protein ApoO PF09769.9 ORF35903 - 1.6 8.7 13.8 0.41 10.6 0.6 3.4 3 2 0 3 3 3 0 Apolipoprotein O DUF883 PF05957.13 ORF35903 - 1.9 9.1 26.1 15 6.3 3.2 5.0 2 2 3 5 5 5 0 Bacterial protein of unknown function (DUF883) Taxilin PF09728.9 ORF35903 - 3.3 6.8 63.7 0.11 11.6 51.6 2.1 1 1 1 2 2 2 0 Myosin-like coiled-coil protein TipAS PF07739.13 ORF35903 - 6.3 7.4 27.0 3.9 8.0 3.7 4.0 2 2 2 4 4 4 0 TipAS antibiotic-recognition domain Pkinase PF00069.25 ORF30006 - 9.9e-66 221.8 0.0 1.9e-65 220.9 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30006 - 1.5e-45 155.6 0.0 7.7e-45 153.2 0.0 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase Choline_kinase PF01633.20 ORF30006 - 0.0058 16.2 0.3 0.018 14.6 0.0 1.9 2 1 0 2 2 2 1 Choline/ethanolamine kinase Kinase-like PF14531.6 ORF30006 - 0.01 15.2 0.0 0.018 14.4 0.0 1.5 1 1 0 1 1 1 0 Kinase-like Kdo PF06293.14 ORF30006 - 0.016 14.6 0.0 0.04 13.3 0.0 1.6 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Med15_fungi PF05397.12 ORF30006 - 0.059 13.6 2.2 0.35 11.2 0.5 2.7 3 0 0 3 3 3 0 Mediator complex subunit 15 RIO1 PF01163.22 ORF30006 - 0.24 11.0 2.6 0.35 10.5 0.2 2.4 2 0 0 2 2 2 0 RIO1 family DUF4894 PF16235.5 ORF27149 - 0.0022 18.4 6.0 0.71 10.2 0.2 3.5 3 0 0 3 3 3 2 Domain of unknown function (DUF4894) RAP PF08373.10 ORF27149 - 0.011 15.8 0.2 0.036 14.1 0.2 2.0 1 0 0 1 1 1 0 RAP domain Cpn60_TCP1 PF00118.24 ORF26126 - 1.5e-157 525.1 13.1 1.7e-157 525.0 13.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family YopD PF05844.12 ORF143709 - 0.033 13.2 1.2 0.054 12.5 1.2 1.3 1 0 0 1 1 1 0 YopD protein MIEAP PF16026.5 ORF143709 - 0.063 13.5 11.0 0.27 11.4 0.2 4.1 3 2 0 3 3 3 0 Mitochondria-eating protein DS PF01916.17 ORF143709 - 0.071 12.3 0.3 0.14 11.3 0.3 1.5 1 0 0 1 1 1 0 Deoxyhypusine synthase ATP-cone PF03477.16 ORF143709 - 0.081 13.5 1.5 0.43 11.2 1.5 2.3 1 0 0 1 1 1 0 ATP cone domain DUF445 PF04286.12 ORF143709 - 0.089 12.6 11.4 0.033 14.0 6.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF445) Ku_PK_bind PF08785.11 ORF143709 - 0.11 12.6 5.6 0.08 13.1 0.6 2.9 2 1 1 3 3 3 0 Ku C terminal domain like Snf7 PF03357.21 ORF143709 - 1.4 8.5 9.0 0.22 11.1 3.2 2.4 2 0 0 2 2 2 0 Snf7 Pkinase PF00069.25 ORF140231 - 2.5e-30 105.8 0.6 5e-21 75.2 0.0 2.6 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF140231 - 1.1e-05 24.9 0.3 0.022 14.0 0.2 2.6 2 0 0 2 2 2 2 Protein tyrosine kinase p450 PF00067.22 ORF139142 - 1.6e-44 152.5 0.7 2.2e-44 152.0 0.7 1.1 1 0 0 1 1 1 1 Cytochrome P450 ENTH PF01417.20 ORF139142 - 0.022 14.8 0.0 0.22 11.6 0.0 2.6 2 1 0 2 2 2 0 ENTH domain FAM76 PF16046.5 ORF134445 - 0.18 11.1 6.1 0.39 10.0 6.1 1.6 1 0 0 1 1 1 0 FAM76 protein DUF948 PF06103.11 ORF134445 - 3.8 7.8 7.4 28 5.1 0.3 4.0 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) p450 PF00067.22 ORF131065 - 2e-55 188.4 0.3 2.5e-55 188.1 0.3 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF4296 PF14129.6 ORF131065 - 0.064 13.9 0.1 0.52 11.0 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4296) Exog_C PF18026.1 ORF131065 - 0.073 13.1 0.1 0.51 10.4 0.0 2.4 2 0 0 2 2 2 0 Endo/exonuclease (EXOG) C-terminal domain UBA_e1_thiolCys PF10585.9 ORF127276 - 7.8e-82 275.0 2.0 1.1e-81 274.5 2.0 1.2 1 0 0 1 1 1 1 Ubiquitin-activating enzyme active site ThiF PF00899.21 ORF127276 - 6.5e-34 117.4 0.0 8.6e-34 117.0 0.0 1.1 1 0 0 1 1 1 1 ThiF family E1_UFD PF09358.10 ORF127276 - 2.2e-14 53.9 0.0 6e-14 52.5 0.0 1.8 1 0 0 1 1 1 1 Ubiquitin fold domain MecA_N PF05223.11 ORF127276 - 0.039 14.2 0.4 0.12 12.6 0.4 1.9 1 0 0 1 1 1 0 NTF2-like N-terminal transpeptidase domain p450 PF00067.22 ORF105858 - 9.3e-50 169.7 0.1 1.3e-49 169.2 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Biotin_lipoyl_2 PF13533.6 ORF105858 - 0.1 12.4 0.0 5.5 6.9 0.0 2.4 2 0 0 2 2 2 0 Biotin-lipoyl like p450 PF00067.22 ORF102823 - 3.8e-49 167.7 0.1 4.7e-49 167.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 TIR_2 PF13676.6 ORF71909 - 0.0021 18.6 0.0 0.0049 17.5 0.0 1.5 1 0 0 1 1 1 1 TIR domain TIR PF01582.20 ORF71909 - 0.0026 17.6 0.0 0.0046 16.8 0.0 1.3 1 0 0 1 1 1 1 TIR domain DUF1863 PF08937.11 ORF71909 - 0.027 14.8 0.0 0.049 13.9 0.0 1.4 1 0 0 1 1 1 0 MTH538 TIR-like domain (DUF1863) p450 PF00067.22 ORF51165 - 5.2e-48 163.9 1.5 6.9e-48 163.5 1.5 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF410 PF04190.13 ORF51165 - 0.017 14.9 0.2 0.082 12.7 0.1 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF410) Fib_alpha PF08702.10 ORF51165 - 0.029 14.5 3.1 0.057 13.6 3.1 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family cEGF PF12662.7 ORF16799 - 0.021 14.7 2.9 0.064 13.2 2.9 1.8 1 0 0 1 1 1 0 Complement Clr-like EGF-like VSP PF03302.13 ORF16799 - 0.031 13.1 6.4 0.048 12.5 6.4 1.2 1 0 0 1 1 1 0 Giardia variant-specific surface protein S1FA PF04689.13 ORF16799 - 1 9.5 4.7 0.25 11.5 0.2 2.3 2 0 0 2 2 2 0 DNA binding protein S1FA DUF3687 PF12459.8 ORF16799 - 4 7.0 10.6 5.6 6.6 0.8 3.7 3 0 0 3 3 3 0 D-Ala-teichoic acid biosynthesis protein FXa_inhibition PF14670.6 ORF16799 - 5.1 7.5 11.4 14 6.1 11.4 1.7 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site GAS PF13851.6 ORF126531 - 0.0014 18.1 13.8 0.002 17.5 13.8 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding Thioredoxin_8 PF13905.6 ORF126531 - 0.0043 17.3 0.0 0.011 16.1 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin-like EzrA PF06160.12 ORF126531 - 0.0054 15.0 11.9 0.0076 14.5 11.9 1.1 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA DUF812 PF05667.11 ORF126531 - 0.0058 15.6 7.1 0.0085 15.0 7.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF812) T3SSipB PF16535.5 ORF126531 - 0.0078 16.7 15.7 0.017 15.6 15.7 1.6 1 0 0 1 1 1 1 Type III cell invasion protein SipB Laminin_I PF06008.14 ORF126531 - 0.0084 15.8 13.9 0.014 15.1 13.9 1.2 1 0 0 1 1 1 1 Laminin Domain I YkyA PF10368.9 ORF126531 - 0.016 14.9 17.8 0.028 14.1 17.8 1.3 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein Thioredoxin PF00085.20 ORF126531 - 0.024 14.6 0.0 0.065 13.2 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin UPF0242 PF06785.11 ORF126531 - 0.031 14.4 12.8 0.049 13.7 12.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Spc7 PF08317.11 ORF126531 - 0.038 12.9 15.0 0.071 12.0 15.0 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Atg14 PF10186.9 ORF126531 - 0.087 11.9 1.3 0.13 11.3 1.3 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Laminin_II PF06009.12 ORF126531 - 0.096 12.7 6.0 0.19 11.7 6.0 1.5 1 0 0 1 1 1 0 Laminin Domain II Exonuc_VII_L PF02601.15 ORF126531 - 0.1 12.2 1.7 0.15 11.6 1.7 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Phage_GP20 PF06810.11 ORF126531 - 0.11 12.3 20.8 0.25 11.2 20.5 1.6 1 1 0 1 1 1 0 Phage minor structural protein GP20 Golgin_A5 PF09787.9 ORF126531 - 0.11 11.9 12.9 0.16 11.4 12.9 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 Cob_adeno_trans PF01923.18 ORF126531 - 0.15 12.2 1.7 0.26 11.4 1.7 1.3 1 0 0 1 1 1 0 Cobalamin adenosyltransferase DUF724 PF05266.14 ORF126531 - 0.25 11.1 11.3 0.43 10.4 11.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) AAA_13 PF13166.6 ORF126531 - 0.34 9.5 8.2 0.52 8.9 8.2 1.2 1 0 0 1 1 1 0 AAA domain MAD PF05557.13 ORF126531 - 0.34 9.2 11.8 0.48 8.7 11.8 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein OmpH PF03938.14 ORF126531 - 0.37 11.1 16.1 0.73 10.2 16.1 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) AATF-Che1 PF13339.6 ORF126531 - 0.45 11.2 8.7 1.1 9.9 8.7 1.6 1 0 0 1 1 1 0 Apoptosis antagonizing transcription factor WDCP PF15390.6 ORF126531 - 0.45 8.8 1.1 0.71 8.2 1.1 1.3 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family DUF3584 PF12128.8 ORF126531 - 0.59 7.6 12.3 0.83 7.1 12.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) PCRF PF03462.18 ORF126531 - 0.59 10.0 10.6 1 9.2 10.6 1.3 1 0 0 1 1 1 0 PCRF domain DUF4407 PF14362.6 ORF126531 - 0.73 9.1 12.6 1.5 8.1 12.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 ORF126531 - 0.83 8.8 6.9 1.2 8.3 6.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein SMBP PF16785.5 ORF126531 - 0.85 9.9 10.5 2 8.7 10.5 1.6 1 0 0 1 1 1 0 Small metal-binding protein Seryl_tRNA_N PF02403.22 ORF126531 - 0.85 9.9 13.5 1.5 9.1 13.5 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF2524 PF10732.9 ORF126531 - 1 9.7 14.6 0.16 12.3 5.6 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2524) DUF948 PF06103.11 ORF126531 - 1 9.7 8.2 1.1 9.6 3.7 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Borrelia_P83 PF05262.11 ORF126531 - 1.2 7.5 16.2 1.9 6.9 16.2 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein APG6_N PF17675.1 ORF126531 - 1.3 9.5 25.7 4.1 7.9 25.8 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region FapA PF03961.13 ORF126531 - 1.7 7.2 9.3 2.4 6.6 9.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4404 PF14357.6 ORF126531 - 1.7 9.3 9.2 10 6.9 9.5 2.1 2 0 0 2 2 1 0 Domain of unknown function (DUF4404) DUF883 PF05957.13 ORF126531 - 1.9 9.2 13.3 4.5 7.9 3.5 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF5082 PF16888.5 ORF126531 - 2.1 8.6 10.9 3.8 7.8 10.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) HR1 PF02185.16 ORF126531 - 2.2 8.5 9.9 0.91 9.7 6.3 2.2 2 1 0 2 2 2 0 Hr1 repeat V_ATPase_I PF01496.19 ORF126531 - 2.7 5.8 5.1 3.9 5.3 5.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF87 PF01935.17 ORF126531 - 2.8 8.0 4.7 5.1 7.1 4.7 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain FlaC_arch PF05377.11 ORF126531 - 3.5 8.1 6.7 4.9 7.6 5.2 2.0 1 1 1 2 2 1 0 Flagella accessory protein C (FlaC) DUF2203 PF09969.9 ORF126531 - 3.6 8.3 6.6 7.9 7.2 6.6 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) IMCp PF12314.8 ORF121764 - 0.012 15.8 1.9 0.032 14.5 1.9 1.7 1 0 0 1 1 1 0 Inner membrane complex protein NPV_P10 PF05531.12 ORF121764 - 0.057 13.9 6.3 1.9 9.0 0.8 4.4 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Fer2_3 PF13085.6 ORF117179 - 1.7e-29 102.0 0.0 3.8e-29 100.9 0.0 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 ORF117179 - 2.9e-11 43.7 1.9 2.9e-11 43.7 1.9 3.7 4 1 0 4 4 4 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF117179 - 2.5e-10 40.3 1.8 2.5e-10 40.3 1.8 3.2 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF117179 - 9.9e-08 32.4 11.4 1.1e-06 29.1 3.2 3.7 4 1 1 5 5 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF117179 - 4e-06 27.3 1.8 4e-06 27.3 1.8 3.7 4 1 0 4 4 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF117179 - 2.1e-05 25.4 1.8 2.1e-05 25.4 1.8 3.0 3 0 0 3 3 2 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 ORF117179 - 8.9e-05 22.7 4.4 0.029 14.6 0.1 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 ORF117179 - 0.00091 19.0 1.4 0.00091 19.0 1.4 3.8 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_9 PF13187.6 ORF117179 - 0.0037 17.4 19.3 0.0053 16.9 0.5 4.7 5 1 0 5 5 4 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF117179 - 0.0062 17.0 1.6 0.0062 17.0 1.6 3.7 5 0 0 5 5 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 ORF117179 - 0.019 15.1 2.1 0.019 15.1 2.1 4.6 5 0 0 5 5 4 0 4Fe-4S binding domain Fer2 PF00111.27 ORF117179 - 0.02 14.8 1.4 0.036 14.0 0.0 2.1 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Fer4_6 PF12837.7 ORF117179 - 0.024 14.7 2.5 0.024 14.7 2.5 3.8 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_13 PF13370.6 ORF117179 - 0.076 13.6 0.9 0.076 13.6 0.9 3.0 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 ORF117179 - 0.48 11.2 2.3 9.1 7.1 0.1 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain cEGF PF12662.7 ORF115184 - 0.021 14.7 2.9 0.064 13.2 2.9 1.8 1 0 0 1 1 1 0 Complement Clr-like EGF-like VSP PF03302.13 ORF115184 - 0.031 13.1 6.4 0.048 12.5 6.4 1.2 1 0 0 1 1 1 0 Giardia variant-specific surface protein S1FA PF04689.13 ORF115184 - 1 9.5 4.7 0.25 11.5 0.2 2.3 2 0 0 2 2 2 0 DNA binding protein S1FA DUF3687 PF12459.8 ORF115184 - 4 7.0 10.6 5.6 6.6 0.8 3.8 3 0 0 3 3 3 0 D-Ala-teichoic acid biosynthesis protein FXa_inhibition PF14670.6 ORF115184 - 5.2 7.4 11.4 14 6.1 11.4 1.7 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site Cpn60_TCP1 PF00118.24 ORF112452 - 2e-148 495.1 9.5 2.3e-148 494.9 9.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Frankia_peptide PF14407.6 ORF112452 - 0.039 13.9 0.2 10 6.2 0.0 2.9 2 0 0 2 2 2 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. AA_permease_2 PF13520.6 ORF96305 - 2.7e-39 135.2 22.2 3.7e-39 134.7 22.2 1.1 1 0 0 1 1 1 1 Amino acid permease Chitin_synth_1 PF01644.17 ORF69716 - 5.7e-18 65.4 0.0 9.5e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 Chitin synthase Chitin_synth_2 PF03142.15 ORF69716 - 3.2e-15 55.8 3.0 3.2e-15 55.8 3.0 3.8 2 1 2 4 4 4 2 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF69716 - 1.3e-07 31.7 12.3 1.3e-07 31.7 12.3 2.4 2 1 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF69716 - 0.0019 18.1 0.0 0.0026 17.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Imm59 PF15597.6 ORF6817 - 0.058 13.9 0.3 0.21 12.1 0.3 1.9 1 0 0 1 1 1 0 Immunity protein 59 DotA PF11388.8 ORF6817 - 0.17 12.1 0.4 6.6 7.0 0.1 2.5 2 0 0 2 2 2 0 Phagosome trafficking protein DotA Trypsin_2 PF13365.6 ORF65769 - 1.2e-29 104.2 0.0 3e-29 102.9 0.0 1.7 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 ORF65769 - 9.2e-13 48.3 0.0 1.9e-12 47.3 0.0 1.6 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 ORF65769 - 3e-11 43.5 0.0 1.4e-10 41.3 0.0 2.0 1 1 0 1 1 1 1 Trypsin PDZ_6 PF17820.1 ORF65769 - 2.4e-08 33.7 1.4 7.6e-05 22.5 0.2 2.6 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF65769 - 0.00034 20.9 0.7 0.0056 17.0 0.6 2.8 1 1 0 1 1 1 1 PDZ domain Tricorn_PDZ PF14685.6 ORF65769 - 0.046 13.7 0.0 0.098 12.6 0.0 1.5 1 0 0 1 1 1 0 Tricorn protease PDZ domain Peptidase_S46 PF10459.9 ORF65769 - 0.084 11.5 0.1 0.13 10.9 0.1 1.1 1 0 0 1 1 1 0 Peptidase S46 PDZ_4 PF17816.1 ORF65769 - 0.097 13.1 0.2 1.2 9.6 0.3 2.3 1 1 0 1 1 1 0 PDZ domain Med25_NR-box PF11244.8 ORF65769 - 0.23 11.9 3.2 0.66 10.4 1.3 2.3 1 1 1 2 2 2 0 Mediator complex subunit 25 C-terminal NR box-containing GlcNAc_2-epim PF07221.11 ORF6568 - 1e-131 439.3 12.9 1.5e-131 438.7 12.9 1.2 1 0 0 1 1 1 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Glyco_hydro_47 PF01532.20 ORF6568 - 0.093 11.6 2.8 1.1 8.0 0.0 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 47 Ion_trans PF00520.31 ORF64236 - 6.3e-19 68.2 12.7 8.9e-19 67.7 12.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF64236 - 0.0041 16.9 0.0 0.018 15.0 0.0 2.1 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF64236 - 0.022 14.3 0.0 0.079 12.5 0.0 2.0 1 0 0 1 1 1 0 EF hand EF-hand_5 PF13202.6 ORF64236 - 0.05 13.1 1.0 0.18 11.3 0.0 2.4 2 0 0 2 2 2 0 EF hand EF-hand_8 PF13833.6 ORF64236 - 0.064 13.1 0.0 2.8 7.8 0.0 2.6 2 0 0 2 2 2 0 EF-hand domain pair p450 PF00067.22 ORF55115 - 3.6e-49 167.8 0.5 4.8e-49 167.4 0.5 1.1 1 0 0 1 1 1 1 Cytochrome P450 USP8_dimer PF08969.11 ORF55115 - 0.11 12.7 2.5 0.12 12.5 0.2 2.2 2 0 0 2 2 2 0 USP8 dimerisation domain TPR_12 PF13424.6 ORF51248 - 2.4e-18 66.2 28.5 3.5e-08 33.6 1.4 5.1 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF51248 - 9.1e-12 44.2 20.9 0.089 12.9 0.2 7.9 7 1 1 8 8 8 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF51248 - 6.3e-11 42.2 24.2 0.00024 20.6 6.1 3.1 1 1 2 3 3 3 3 MalT-like TPR region TPR_8 PF13181.6 ORF51248 - 0.00045 20.2 13.5 0.84 10.0 0.1 6.9 6 1 1 7 7 7 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF51248 - 0.00045 20.0 22.7 0.031 14.2 0.2 7.1 6 1 2 8 8 8 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF51248 - 0.00061 19.5 19.2 2.7 7.9 0.1 7.4 7 1 1 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF51248 - 0.05 14.3 23.8 0.11 13.1 0.4 5.6 4 2 3 7 7 7 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF51248 - 0.08 13.0 14.6 0.38 10.9 1.2 4.0 5 1 1 6 6 6 0 Anaphase-promoting complex subunit 5 PMAIP1 PF15150.6 ORF51248 - 0.15 12.0 0.4 1.1 9.1 0.1 2.5 2 0 0 2 2 2 0 Phorbol-12-myristate-13-acetate-induced TPR_14 PF13428.6 ORF51248 - 0.15 12.9 30.8 24 6.1 0.4 8.1 6 2 2 8 8 8 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF51248 - 0.16 12.1 7.4 2.3 8.4 0.0 5.5 5 3 0 5 5 5 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF51248 - 0.17 12.4 21.6 0.12 12.9 1.4 4.7 3 1 0 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF51248 - 0.82 10.4 18.5 25 5.8 0.1 7.0 6 1 1 7 7 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF51248 - 3.1 8.7 0.0 3.1 8.7 0.0 7.0 7 0 0 7 7 7 0 Tetratricopeptide repeat Peptidase_S74 PF13884.6 ORF32285 - 2.7e-10 40.4 0.1 1.2e-09 38.3 0.0 2.2 2 1 0 2 2 2 1 Chaperone of endosialidase Nup35_RRM PF05172.13 ORF32285 - 0.15 12.0 0.0 31 4.6 0.0 3.8 2 1 1 3 3 3 0 Nup53/35/40-type RNA recognition motif TPR_12 PF13424.6 ORF26975 - 2.4e-18 66.2 28.5 3.5e-08 33.6 1.4 5.1 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF26975 - 9.1e-12 44.2 20.9 0.089 12.9 0.2 7.9 7 1 1 8 8 8 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF26975 - 6.3e-11 42.2 24.2 0.00024 20.6 6.1 3.1 1 1 2 3 3 3 3 MalT-like TPR region TPR_8 PF13181.6 ORF26975 - 0.00045 20.2 13.5 0.84 10.0 0.1 6.9 6 1 1 7 7 7 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF26975 - 0.00045 20.0 22.7 0.031 14.2 0.2 7.1 6 1 2 8 8 8 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF26975 - 0.00061 19.5 19.2 2.7 7.9 0.1 7.4 7 1 1 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF26975 - 0.05 14.3 23.8 0.11 13.1 0.4 5.6 4 2 3 7 7 7 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF26975 - 0.08 13.0 14.6 0.38 10.9 1.2 4.0 5 1 1 6 6 6 0 Anaphase-promoting complex subunit 5 PMAIP1 PF15150.6 ORF26975 - 0.15 12.0 0.4 1.1 9.1 0.1 2.5 2 0 0 2 2 2 0 Phorbol-12-myristate-13-acetate-induced TPR_14 PF13428.6 ORF26975 - 0.15 12.9 30.8 24 6.1 0.4 8.1 6 2 2 8 8 8 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF26975 - 0.16 12.1 7.4 2.3 8.4 0.0 5.5 5 3 0 5 5 5 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF26975 - 0.17 12.4 21.6 0.12 12.9 1.4 4.7 3 1 0 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF26975 - 0.82 10.4 18.5 25 5.8 0.1 7.0 6 1 1 7 7 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF26975 - 3.1 8.7 0.0 3.1 8.7 0.0 7.0 7 0 0 7 7 7 0 Tetratricopeptide repeat EGF PF00008.27 ORF147594 - 0.0048 17.2 8.8 0.0048 17.2 8.8 2.5 2 0 0 2 2 2 1 EGF-like domain SAPS PF04499.15 ORF147594 - 0.055 12.3 2.0 0.083 11.7 2.0 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein EGF_2 PF07974.13 ORF147594 - 0.098 13.0 12.4 0.22 11.9 12.4 1.6 1 0 0 1 1 1 0 EGF-like domain hEGF PF12661.7 ORF147594 - 0.32 11.7 5.7 1.6 9.5 5.7 2.3 1 0 0 1 1 1 0 Human growth factor-like EGF ATP-synt_E PF05680.12 ORF147594 - 0.67 10.3 5.1 1.2 9.5 0.1 2.6 2 0 0 2 2 2 0 ATP synthase E chain EGF_Tenascin PF18720.1 ORF147594 - 1.6 8.8 6.9 3.4 7.8 6.9 1.6 1 0 0 1 1 1 0 Tenascin EGF domain TPR_12 PF13424.6 ORF144544 - 2.4e-18 66.2 28.5 3.5e-08 33.6 1.4 5.1 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF144544 - 9.1e-12 44.2 20.9 0.089 12.9 0.2 7.9 7 1 1 8 8 8 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF144544 - 6.3e-11 42.2 24.2 0.00024 20.6 6.1 3.1 1 1 2 3 3 3 3 MalT-like TPR region TPR_8 PF13181.6 ORF144544 - 0.00045 20.2 13.5 0.84 10.0 0.1 6.9 6 1 1 7 7 7 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF144544 - 0.00045 20.0 22.7 0.031 14.2 0.2 7.1 6 1 2 8 8 8 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF144544 - 0.00061 19.5 19.2 2.7 7.9 0.1 7.4 7 1 1 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF144544 - 0.05 14.3 23.8 0.11 13.1 0.4 5.6 4 2 3 7 7 7 0 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF144544 - 0.08 13.0 14.6 0.38 10.9 1.2 4.0 5 1 1 6 6 6 0 Anaphase-promoting complex subunit 5 PMAIP1 PF15150.6 ORF144544 - 0.15 12.0 0.4 1.1 9.1 0.1 2.5 2 0 0 2 2 2 0 Phorbol-12-myristate-13-acetate-induced TPR_14 PF13428.6 ORF144544 - 0.15 12.9 30.8 24 6.1 0.4 8.1 6 2 2 8 8 8 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF144544 - 0.16 12.1 7.4 2.3 8.4 0.0 5.5 5 3 0 5 5 5 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF144544 - 0.17 12.4 21.6 0.12 12.9 1.4 4.7 3 1 0 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF144544 - 0.82 10.4 18.5 25 5.8 0.1 7.0 6 1 1 7 7 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF144544 - 3.1 8.7 0.0 3.1 8.7 0.0 7.0 7 0 0 7 7 7 0 Tetratricopeptide repeat Dynamin_M PF01031.20 ORF12282 - 1.3e-81 274.0 0.0 2.1e-81 273.3 0.0 1.4 1 0 0 1 1 1 1 Dynamin central region GED PF02212.18 ORF12282 - 6e-26 90.4 2.3 6e-26 90.4 2.3 2.3 3 0 0 3 3 3 1 Dynamin GTPase effector domain Dynamin_N PF00350.23 ORF12282 - 1.7e-19 70.5 0.1 3.5e-19 69.5 0.1 1.5 1 0 0 1 1 1 1 Dynamin family BAG PF02179.16 ORF12282 - 0.017 15.5 0.3 13 6.3 0.1 3.8 4 0 0 4 4 4 0 BAG domain CybS PF05328.12 ORF12282 - 0.14 11.9 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit GlcNAc_2-epim PF07221.11 ORF118409 - 1e-131 439.3 12.9 1.5e-131 438.7 12.9 1.2 1 0 0 1 1 1 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Glyco_hydro_47 PF01532.20 ORF118409 - 0.093 11.6 2.8 1.1 8.0 0.0 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 47 Zeta_toxin PF06414.12 ORF111373 - 1.5e-15 57.1 0.0 9e-13 48.0 0.0 2.2 2 0 0 2 2 2 2 Zeta toxin AAA_33 PF13671.6 ORF111373 - 0.00049 20.3 0.0 0.61 10.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain TniB PF05621.11 ORF111373 - 0.13 11.7 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein UCH PF00443.29 ORF90566 - 2.2e-30 106.0 0.0 3.6e-30 105.3 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 ORF90566 - 2.2e-07 31.1 0.0 3.8e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein UCH_1 PF13423.6 ORF90566 - 0.042 13.4 0.0 0.14 11.7 0.0 1.8 1 1 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Phospholip_B PF04916.13 ORF82167 - 7.3e-74 249.2 10.3 9.8e-74 248.8 10.3 1.1 1 0 0 1 1 1 1 Phospholipase B SNF PF00209.18 ORF67629 - 2.1e-92 310.5 52.2 1.1e-56 192.6 28.5 2.0 1 1 1 2 2 2 2 Sodium:neurotransmitter symporter family Kinesin PF00225.23 ORF65882 - 9.4e-88 294.3 3.0 9.4e-88 294.3 3.0 2.2 3 0 0 3 3 3 1 Kinesin motor domain Microtub_bd PF16796.5 ORF65882 - 7.5e-15 55.1 3.6 7.5e-15 55.1 3.6 2.7 2 1 1 3 3 3 1 Microtubule binding DUF2791 PF10923.8 ORF65882 - 0.0053 15.6 0.1 0.01 14.7 0.1 1.4 1 0 0 1 1 1 1 P-loop Domain of unknown function (DUF2791) NTF-like PF14540.6 ORF65882 - 0.021 14.6 1.1 0.046 13.5 0.1 2.1 2 0 0 2 2 2 0 Nucleotidyltransferase-like ATP-grasp_3 PF02655.14 ORF65882 - 0.045 13.8 0.1 0.51 10.4 0.0 2.3 2 0 0 2 2 2 0 ATP-grasp domain Na_trans_assoc PF06512.13 ORF65882 - 9.1 6.5 15.3 6.4 7.0 2.0 2.6 2 1 0 2 2 2 0 Sodium ion transport-associated Nodulin-like PF06813.13 ORF56530 - 5.1e-07 29.4 25.5 6.3e-07 29.1 24.1 1.9 1 1 1 2 2 2 1 Nodulin-like MFS_1 PF07690.16 ORF56530 - 0.052 12.5 55.9 0.0042 16.1 32.6 3.0 2 1 0 3 3 3 0 Major Facilitator Superfamily FlxA PF14282.6 ORF55566 - 3.4e-07 30.2 51.9 6.3e-05 22.9 9.0 8.2 2 2 4 6 6 6 4 FlxA-like protein CCDC92 PF14916.6 ORF55566 - 0.00017 21.3 29.5 0.17 11.7 0.1 8.6 8 2 0 8 8 8 4 Coiled-coil domain of unknown function Tropomyosin_1 PF12718.7 ORF55566 - 0.0013 18.9 16.4 0.0032 17.6 5.5 5.8 3 2 3 6 6 6 3 Tropomyosin like NPV_P10 PF05531.12 ORF55566 - 0.069 13.6 55.1 0.51 10.8 6.5 6.1 4 1 1 6 6 6 0 Nucleopolyhedrovirus P10 protein Peptidase_S49_N PF08496.10 ORF49861 - 0.003 17.6 1.1 0.0076 16.3 1.1 1.7 1 0 0 1 1 1 1 Peptidase family S49 N-terminal U79_P34 PF03064.16 ORF49861 - 0.78 9.0 7.5 1.9 7.8 7.5 1.6 1 0 0 1 1 1 0 HSV U79 / HCMV P34 PAN_4 PF14295.6 ORF20884 - 0.00019 21.3 2.8 0.25 11.3 0.1 3.0 2 0 0 2 2 2 2 PAN domain PAN_2 PF08276.11 ORF20884 - 0.032 14.3 3.1 0.96 9.6 0.4 2.7 2 0 0 2 2 2 0 PAN-like domain A_deaminase PF00962.22 ORF126142 - 4e-36 125.0 0.1 1.9e-35 122.7 0.0 1.9 2 0 0 2 2 2 1 Adenosine/AMP deaminase A_deaminase_N PF08451.11 ORF126142 - 0.0024 18.1 0.5 0.0079 16.5 0.5 1.9 1 0 0 1 1 1 1 Adenosine/AMP deaminase N-terminal Rsa3 PF14615.6 ORF126142 - 0.01 15.4 0.1 2 8.0 0.0 2.7 2 0 0 2 2 2 0 Ribosome-assembly protein 3 Tubulin PF00091.25 ORF120057 - 1.4e-64 218.0 0.0 1.9e-64 217.5 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF120057 - 3.4e-51 172.7 0.2 6.1e-51 171.8 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF120057 - 0.043 13.5 0.0 0.09 12.5 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Pyr_redox_2 PF07992.14 ORF93459 - 2e-44 152.0 6.2 4.7e-44 150.8 5.9 1.7 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF93459 - 8.7e-21 74.5 2.4 3.2e-18 66.0 0.0 2.6 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF93459 - 8.7e-15 55.1 0.4 8.7e-15 55.1 0.4 3.5 4 0 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF93459 - 6.3e-10 38.7 8.6 0.00063 18.9 1.0 4.0 3 1 1 4 4 4 3 Glucose inhibited division protein A Thioredoxin_3 PF13192.6 ORF93459 - 1e-08 35.1 0.0 3.2e-08 33.5 0.0 1.9 1 0 0 1 1 1 1 Thioredoxin domain FAD_binding_2 PF00890.24 ORF93459 - 1.3e-06 27.8 15.6 0.0067 15.5 1.7 4.4 2 2 1 4 4 4 3 FAD binding domain HI0933_like PF03486.14 ORF93459 - 5.5e-05 22.1 8.1 0.13 10.9 0.3 3.5 3 0 0 3 3 3 2 HI0933-like protein FAD_oxidored PF12831.7 ORF93459 - 0.00012 21.5 14.9 0.00017 21.1 2.0 3.3 2 2 1 3 3 3 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF93459 - 0.00027 20.3 3.3 0.0032 16.8 0.5 2.3 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 ORF93459 - 0.00031 20.0 1.6 0.0041 16.4 0.2 2.3 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 ORF93459 - 0.00047 20.3 4.8 0.025 14.8 0.2 3.8 4 0 0 4 4 4 1 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 ORF93459 - 0.0025 17.0 0.7 0.036 13.2 0.1 2.6 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 ORF93459 - 0.0033 16.7 1.1 0.15 11.3 0.1 2.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Glutaredoxin PF00462.24 ORF93459 - 0.0065 16.7 6.1 0.021 15.0 0.0 3.7 4 0 0 4 4 4 1 Glutaredoxin DAO PF01266.24 ORF93459 - 0.018 14.6 12.5 0.94 9.0 0.8 3.8 5 0 0 5 5 5 0 FAD dependent oxidoreductase FMO-like PF00743.19 ORF93459 - 0.021 13.3 0.0 0.035 12.5 0.0 1.3 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Lycopene_cycl PF05834.12 ORF93459 - 0.063 12.3 3.6 2.1 7.3 0.3 3.0 3 0 0 3 3 3 0 Lycopene cyclase protein NAD_binding_7 PF13241.6 ORF93459 - 0.23 11.9 2.7 1 9.8 0.1 2.8 3 1 0 3 3 3 0 Putative NAD(P)-binding ABC_tran PF00005.27 ORF93112 - 6.5e-37 127.1 0.4 2.2e-21 76.8 0.0 3.2 2 1 1 3 3 3 2 ABC transporter AAA_21 PF13304.6 ORF93112 - 1.3e-13 51.5 0.3 0.00045 20.1 0.0 3.4 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 ORF93112 - 2.8e-11 43.3 7.2 7e-11 42.0 4.0 2.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF93112 - 4.4e-06 26.3 0.3 0.64 9.4 0.1 3.2 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF93112 - 0.0015 19.1 2.7 0.0054 17.3 0.1 2.4 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF93112 - 0.011 15.4 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 ORF93112 - 0.024 14.9 2.3 9.3 6.6 0.0 4.0 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 ORF93112 - 0.041 13.6 0.0 0.13 12.1 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF93112 - 0.05 13.9 0.3 0.49 10.7 0.1 2.5 2 1 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF93112 - 0.066 12.4 0.1 0.19 10.9 0.1 1.7 1 0 0 1 1 1 0 NB-ARC domain DUF3584 PF12128.8 ORF93112 - 0.11 10.0 5.4 5.4 4.4 0.8 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3584) RecA PF00154.21 ORF93112 - 0.12 11.8 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 recA bacterial DNA recombination protein cobW PF02492.19 ORF93112 - 0.12 11.9 0.1 0.39 10.3 0.1 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 ORF93112 - 0.13 12.5 1.0 0.18 12.0 0.0 1.8 2 0 0 2 2 1 0 AAA domain RPW8 PF05659.11 ORF93112 - 0.13 11.9 0.0 0.63 9.7 0.0 2.0 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MMR_HSR1 PF01926.23 ORF93112 - 0.14 12.2 0.0 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 ORF93112 - 0.16 11.6 0.0 0.47 10.1 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF93112 - 0.28 10.7 2.0 9.9 5.7 0.1 3.6 4 0 0 4 4 4 0 AAA domain NPV_P10 PF05531.12 ORF93112 - 0.28 11.7 1.3 4.2 7.9 0.4 2.9 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein HSP70 PF00012.20 ORF92658 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF92658 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF92658 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF92658 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF92658 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF92658 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF92658 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus DUF3104 PF11302.8 ORF8410 - 0.13 12.0 0.1 0.34 10.7 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3104) PKcGMP_CC PF16808.5 ORF79793 - 0.0059 16.4 1.9 0.0059 16.4 1.9 5.4 6 0 0 6 6 6 2 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_TATA_bd PF12325.8 ORF79793 - 2 8.7 38.8 0.035 14.3 2.4 4.8 1 1 4 5 5 5 0 TATA element modulatory factor 1 TATA binding Tyr-DNA_phospho PF06087.12 ORF57973 - 1.8e-44 152.4 0.2 3.4e-26 92.1 0.0 2.1 2 0 0 2 2 2 2 Tyrosyl-DNA phosphodiesterase PLDc_2 PF13091.6 ORF57973 - 1.2e-06 28.4 0.1 0.0027 17.6 0.1 2.6 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 ORF57973 - 0.29 11.4 1.5 0.88 9.9 0.8 2.3 2 1 0 2 2 2 0 Phospholipase D Active site motif SirA PF10747.9 ORF57973 - 1.4 9.3 6.0 5.6 7.3 1.3 2.5 2 0 0 2 2 2 0 Sporulation inhibitor of replication protein SirA Aconitase PF00330.20 ORF5503 - 2.8e-41 142.0 0.0 3.6e-39 135.1 0.0 2.4 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_2_N PF06434.13 ORF5503 - 3.9e-11 43.0 0.0 6.3e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Aconitate hydratase 2 N-terminus PI-TkoII_IV PF18714.1 ORF5503 - 0.077 12.5 0.0 1.9 8.0 0.0 2.3 2 0 0 2 2 2 0 DNA polymerase II intein Domain IV ABC_tran PF00005.27 ORF5156 - 6.5e-37 127.1 0.4 2.2e-21 76.8 0.0 3.2 2 1 1 3 3 3 2 ABC transporter AAA_21 PF13304.6 ORF5156 - 1.3e-13 51.5 0.3 0.00045 20.1 0.0 3.4 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 ORF5156 - 2.8e-11 43.3 7.2 7e-11 42.0 4.0 2.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF5156 - 4.4e-06 26.3 0.3 0.64 9.4 0.1 3.2 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF5156 - 0.0015 19.1 2.7 0.0054 17.3 0.1 2.4 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF5156 - 0.011 15.4 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 ORF5156 - 0.024 14.9 2.3 9.3 6.6 0.0 4.0 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 ORF5156 - 0.041 13.6 0.0 0.13 12.1 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF5156 - 0.05 13.9 0.3 0.49 10.7 0.1 2.5 2 1 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF5156 - 0.066 12.4 0.1 0.19 10.9 0.1 1.7 1 0 0 1 1 1 0 NB-ARC domain DUF3584 PF12128.8 ORF5156 - 0.11 10.0 5.4 5.4 4.4 0.8 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3584) RecA PF00154.21 ORF5156 - 0.12 11.8 0.0 0.21 11.0 0.0 1.3 1 0 0 1 1 1 0 recA bacterial DNA recombination protein cobW PF02492.19 ORF5156 - 0.12 11.9 0.1 0.39 10.3 0.1 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 ORF5156 - 0.13 12.5 1.0 0.18 12.0 0.0 1.8 2 0 0 2 2 1 0 AAA domain RPW8 PF05659.11 ORF5156 - 0.13 11.9 0.0 0.63 9.7 0.0 2.0 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MMR_HSR1 PF01926.23 ORF5156 - 0.14 12.2 0.0 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 ORF5156 - 0.16 11.6 0.0 0.47 10.1 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF5156 - 0.28 10.7 2.0 9.9 5.7 0.1 3.6 4 0 0 4 4 4 0 AAA domain NPV_P10 PF05531.12 ORF5156 - 0.28 11.7 1.3 4.2 7.9 0.4 2.9 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein SlyX PF04102.12 ORF49356 - 0.0015 19.1 2.0 0.0015 19.1 2.0 7.4 4 2 4 8 8 8 3 SlyX ABC_tran_CTD PF16326.5 ORF49356 - 0.0089 16.3 5.6 0.0089 16.3 5.6 7.7 6 3 3 9 9 9 2 ABC transporter C-terminal domain DUF2935 PF11155.8 ORF49356 - 0.2 12.0 21.6 0.11 12.9 1.8 4.5 1 1 3 4 4 4 0 Domain of unknown function (DUF2935) RNaseH_like PF04308.12 ORF49356 - 0.48 10.3 5.6 0.21 11.5 0.3 3.0 3 0 0 3 3 3 0 Ribonuclease H-like DASH_Dam1 PF08653.10 ORF49356 - 2.4 8.1 4.4 3.4 7.6 0.6 3.3 3 0 0 3 3 3 0 DASH complex subunit Dam1 MctB PF11382.8 ORF49356 - 7.9 6.1 8.6 7.7 6.1 0.9 2.8 2 0 0 2 2 2 0 Copper transport outer membrane protein, MctB TPR_MLP1_2 PF07926.12 ORF47953 - 0.012 15.7 8.7 0.012 15.7 8.7 4.9 3 1 2 5 5 5 0 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 ORF46731 - 0.21 10.9 9.3 0.39 10.0 9.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Mem_trans PF03547.18 ORF46731 - 0.36 9.2 0.0 0.36 9.2 0.0 2.1 1 1 1 2 2 2 0 Membrane transport protein Macoilin PF09726.9 ORF46731 - 2.4 6.6 10.6 3.4 6.1 10.6 1.1 1 0 0 1 1 1 0 Macoilin family DUF4476 PF14771.6 ORF37985 - 0.12 12.7 0.2 2.9 8.3 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4476) Ion_trans PF00520.31 ORF35515 - 0.0025 17.1 21.0 0.017 14.4 19.8 2.4 1 1 1 2 2 2 1 Ion transport protein Popeye PF04831.13 ORF35515 - 1 9.5 7.0 2.8 8.1 7.0 1.7 1 0 0 1 1 1 0 Popeye protein conserved region AAA PF00004.29 ORF23952 - 3.7e-77 257.1 0.0 9.3e-46 155.5 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF23952 - 4.5e-25 87.2 6.8 5.8e-12 45.2 0.2 3.1 2 2 0 2 2 2 2 AAA+ lid domain AAA_2 PF07724.14 ORF23952 - 1e-08 35.5 0.0 0.0025 17.9 0.1 2.7 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 ORF23952 - 1.1e-06 29.1 0.1 0.0014 19.1 0.0 3.5 3 1 1 4 4 3 1 AAA ATPase domain RuvB_N PF05496.12 ORF23952 - 1e-05 25.4 0.0 0.00013 21.8 0.0 2.6 3 1 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 ORF23952 - 8.8e-05 22.5 0.3 0.046 13.7 0.0 3.3 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) Vps4_C PF09336.10 ORF23952 - 0.00017 21.5 0.1 0.0091 16.0 0.0 2.6 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_22 PF13401.6 ORF23952 - 0.00036 20.8 0.1 0.11 12.7 0.0 3.4 2 1 2 4 4 4 1 AAA domain AAA_14 PF13173.6 ORF23952 - 0.00071 19.6 0.0 0.11 12.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF23952 - 0.0018 18.5 0.0 0.0065 16.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF23952 - 0.0025 17.6 0.0 0.0046 16.7 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 ORF23952 - 0.0037 16.9 0.1 0.25 10.9 0.0 2.5 2 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 ORF23952 - 0.0038 17.6 0.0 0.01 16.2 0.0 1.7 1 0 0 1 1 1 1 RNA helicase TIP49 PF06068.13 ORF23952 - 0.0073 15.6 0.0 0.016 14.5 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain Bac_DnaA PF00308.18 ORF23952 - 0.008 16.0 0.0 5 6.9 0.0 2.6 3 0 0 3 3 2 1 Bacterial dnaA protein Mg_chelatase PF01078.21 ORF23952 - 0.01 15.2 0.0 0.024 14.0 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 ORF23952 - 0.017 15.7 0.0 0.049 14.2 0.0 1.8 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 ORF23952 - 0.017 15.0 0.0 0.49 10.3 0.0 2.4 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea KAP_NTPase PF07693.14 ORF23952 - 0.039 13.2 0.0 0.49 9.6 0.0 2.3 2 1 1 3 3 3 0 KAP family P-loop domain NACHT PF05729.12 ORF23952 - 0.043 13.7 0.0 0.34 10.8 0.0 2.2 1 1 0 2 2 2 0 NACHT domain IstB_IS21 PF01695.17 ORF23952 - 0.046 13.5 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF23952 - 0.048 13.2 0.0 0.18 11.3 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF23952 - 0.055 14.0 0.0 0.2 12.2 0.0 1.9 2 0 0 2 2 2 0 ABC transporter DUF815 PF05673.13 ORF23952 - 0.067 12.3 0.0 0.17 11.0 0.0 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF815) AAA_28 PF13521.6 ORF23952 - 0.069 13.4 0.0 0.17 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF23952 - 0.091 12.5 0.0 3.1 7.5 0.0 2.8 2 1 0 2 2 2 0 Sigma-54 interaction domain ATPase PF06745.13 ORF23952 - 0.094 12.0 0.0 1.2 8.4 0.0 2.2 2 0 0 2 2 2 0 KaiC NTPase_1 PF03266.15 ORF23952 - 0.1 12.5 0.5 4 7.3 0.0 2.9 3 0 0 3 3 3 0 NTPase Rad17 PF03215.15 ORF23952 - 0.12 12.3 0.0 0.66 9.9 0.0 2.1 3 0 0 3 3 3 0 Rad17 P-loop domain TsaE PF02367.17 ORF23952 - 0.16 11.9 0.0 0.44 10.6 0.0 1.6 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 ORF23952 - 0.18 10.9 0.0 0.28 10.2 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 HSP70 PF00012.20 ORF2020 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF2020 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF2020 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF2020 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF2020 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF2020 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF2020 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus HSP70 PF00012.20 ORF18189 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF18189 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF18189 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF18189 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF18189 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF18189 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF18189 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus HSP70 PF00012.20 ORF1675 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF1675 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF1675 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF1675 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF1675 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF1675 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF1675 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus RSN1_7TM PF02714.15 ORF146765 - 5e-37 127.7 10.7 6.3e-37 127.4 10.7 1.1 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate PHM7_cyt PF14703.6 ORF146765 - 0.0033 17.7 0.0 0.0056 16.9 0.0 1.3 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter DctQ PF04290.12 ORF146765 - 5.1 7.0 18.2 0.034 14.0 7.7 2.4 2 0 0 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF5600 PF18150.1 ORF14577 - 2.3e-36 124.6 0.9 7.9e-36 122.9 0.7 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF5600) Dynamin_N PF00350.23 ORF14577 - 5.3e-15 55.9 0.0 1.7e-14 54.2 0.0 1.9 1 1 0 1 1 1 1 Dynamin family EHD_N PF16880.5 ORF14577 - 1.6e-11 43.9 0.7 3.8e-11 42.7 0.7 1.6 1 0 0 1 1 1 1 N-terminal EH-domain containing protein EF-hand_4 PF12763.7 ORF14577 - 1.9e-11 43.9 0.0 5.9e-11 42.3 0.0 1.8 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand MMR_HSR1 PF01926.23 ORF14577 - 6e-09 36.0 0.0 1.5e-08 34.7 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF14577 - 0.00011 22.1 0.8 0.22 11.4 0.2 3.3 2 1 1 3 3 3 2 RsgA GTPase EF-hand_1 PF00036.32 ORF14577 - 0.00098 18.5 0.0 0.0044 16.5 0.0 2.1 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF14577 - 0.0029 17.4 0.0 4.1 7.3 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF14577 - 0.0087 16.5 0.0 0.047 14.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF14577 - 0.011 15.6 0.1 0.29 11.2 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain AAA_28 PF13521.6 ORF14577 - 0.034 14.4 0.0 0.11 12.7 0.0 1.9 1 0 0 1 1 1 0 AAA domain EF-hand_5 PF13202.6 ORF14577 - 0.081 12.5 0.0 0.28 10.7 0.0 1.9 1 0 0 1 1 1 0 EF hand Ribosomal_S10 PF00338.22 ORF14577 - 0.17 12.2 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S10p/S20e AAA_29 PF13555.6 ORF14577 - 0.18 11.6 0.0 0.47 10.2 0.0 1.7 2 0 0 2 2 1 0 P-loop containing region of AAA domain DUF4795 PF16043.5 ORF14577 - 2.8 7.5 6.3 1.3 8.5 3.7 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) HSP70 PF00012.20 ORF141785 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF141785 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF141785 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF141785 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF141785 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF141785 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF141785 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus SdiA-regulated PF06977.11 ORF141768 - 1.4e-87 293.1 0.1 1.7e-87 292.7 0.1 1.1 1 0 0 1 1 1 1 SdiA-regulated BcrAD_BadFG PF01869.20 ORF141768 - 3.4e-33 115.3 0.2 5.5e-33 114.6 0.2 1.3 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Phytase-like PF13449.6 ORF141768 - 1.7e-06 28.2 0.0 1e-05 25.7 0.0 2.0 1 1 1 2 2 2 1 Esterase-like activity of phytase NusG_II PF07009.11 ORF141768 - 0.028 14.6 0.9 0.91 9.8 0.1 3.2 2 2 1 3 3 3 0 NusG domain II MreB_Mbl PF06723.13 ORF141768 - 0.095 11.5 0.0 0.16 10.7 0.0 1.3 1 0 0 1 1 1 0 MreB/Mbl protein DUF5050 PF16472.5 ORF141768 - 0.11 11.7 0.1 0.19 10.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5050) Tyr-DNA_phospho PF06087.12 ORF140349 - 1.8e-44 152.4 0.2 3.4e-26 92.1 0.0 2.1 2 0 0 2 2 2 2 Tyrosyl-DNA phosphodiesterase PLDc_2 PF13091.6 ORF140349 - 1.2e-06 28.4 0.1 0.0027 17.6 0.1 2.6 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 ORF140349 - 0.29 11.4 1.5 0.88 9.9 0.8 2.3 2 1 0 2 2 2 0 Phospholipase D Active site motif SirA PF10747.9 ORF140349 - 1.4 9.3 6.0 5.6 7.3 1.3 2.5 2 0 0 2 2 2 0 Sporulation inhibitor of replication protein SirA Pkinase PF00069.25 ORF13264 - 1.7e-75 253.8 0.3 2.8e-75 253.1 0.3 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13264 - 7.4e-37 127.0 0.0 1.6e-36 125.9 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase Myosin_TH1 PF06017.13 ORF13264 - 7.3e-10 38.8 6.5 9.1e-10 38.5 4.3 2.0 2 0 0 2 2 2 1 Unconventional myosin tail, actin- and lipid-binding Kinase-like PF14531.6 ORF13264 - 1.9e-09 37.3 0.0 4.8e-09 35.9 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Pkinase_C PF00433.24 ORF13264 - 6.3e-06 26.8 1.6 1.8e-05 25.4 1.6 1.8 1 0 0 1 1 1 1 Protein kinase C terminal domain Pkinase_fungal PF17667.1 ORF13264 - 1.2e-05 24.3 0.0 2.2e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF13264 - 0.013 15.1 0.0 0.031 13.9 0.0 1.7 1 0 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF13264 - 0.13 11.6 0.0 0.28 10.5 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Inhibitor_Mig-6 PF11555.8 ORF13264 - 0.21 11.7 0.0 0.41 10.8 0.0 1.4 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 HSP70 PF00012.20 ORF125866 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF125866 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF125866 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF125866 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF125866 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF125866 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF125866 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus FtsX PF02687.21 ORF124744 - 0.0039 17.6 4.4 0.0039 17.6 4.4 3.9 3 1 1 4 4 4 3 FtsX-like permease family DUF4200 PF13863.6 ORF119778 - 0.024 15.0 9.0 0.024 15.0 9.0 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) DUF3450 PF11932.8 ORF119778 - 0.088 12.1 29.4 0.51 9.6 11.8 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Lipoprotein_20 PF13942.6 ORF119778 - 3.1 7.7 22.7 0.27 11.1 9.6 3.2 1 1 2 3 3 3 0 YfhG lipoprotein Tropomyosin_1 PF12718.7 ORF119778 - 7.8 6.6 53.3 0.23 11.6 9.9 3.1 2 1 1 3 3 3 0 Tropomyosin like HSP70 PF00012.20 ORF118976 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF118976 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF118976 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF118976 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF118976 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF118976 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF118976 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus Pkinase PF00069.25 ORF117339 - 1.2e-12 47.8 0.0 3.2e-12 46.4 0.0 1.8 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF117339 - 8e-06 25.3 0.0 2e-05 24.0 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase HSP70 PF00012.20 ORF116617 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF116617 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF116617 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF116617 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF116617 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF116617 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF116617 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus HSP70 PF00012.20 ORF106027 - 3.3e-211 702.6 8.1 3.7e-211 702.5 8.1 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF106027 - 1.5e-15 56.9 0.2 2.3e-15 56.2 0.2 1.2 1 0 0 1 1 1 1 MreB/Mbl protein DIOX_N PF14226.6 ORF106027 - 0.0031 18.2 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal FGGY_C PF02782.16 ORF106027 - 0.0035 17.1 0.0 0.0075 16.0 0.0 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain DDR PF08841.10 ORF106027 - 0.028 13.4 0.1 1.7 7.5 0.0 2.3 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 ORF106027 - 0.063 12.5 0.1 0.12 11.6 0.1 1.5 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DnaI_N PF07319.11 ORF106027 - 0.36 11.5 2.3 0.52 11.0 0.1 2.3 2 0 0 2 2 2 0 Primosomal protein DnaI N-terminus Aconitase PF00330.20 ORF10563 - 1e-41 143.4 0.0 7.5e-22 77.9 0.1 2.4 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) Aconitase_2_N PF06434.13 ORF10563 - 3.9e-11 43.0 0.0 6.3e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Aconitate hydratase 2 N-terminus PI-TkoII_IV PF18714.1 ORF10563 - 0.079 12.4 0.0 1.9 8.0 0.0 2.3 2 0 0 2 2 2 0 DNA polymerase II intein Domain IV Adaptin_N PF01602.20 ORF9003 - 2e-71 241.2 24.6 2.3e-71 240.9 24.6 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF9003 - 1.7e-09 38.0 18.4 3e-06 27.4 3.9 5.3 3 1 2 5 5 5 3 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 ORF9003 - 1.9e-06 28.2 0.0 0.03 14.7 0.0 4.7 2 1 2 5 5 5 2 HEAT repeats HEAT_PBS PF03130.16 ORF9003 - 0.00036 20.9 0.0 0.014 16.0 0.1 3.5 4 0 0 4 4 4 1 PBS lyase HEAT-like repeat Glycoprotein_B PF00606.18 ORF9003 - 0.024 14.1 0.1 0.12 11.8 0.0 2.1 2 0 0 2 2 2 0 Herpesvirus Glycoprotein B ectodomain RTTN_N PF14726.6 ORF9003 - 0.11 13.3 5.7 0.58 11.0 0.5 3.9 3 1 1 4 4 4 0 Rotatin, an armadillo repeat protein, centriole functioning Vac14_Fab1_bd PF12755.7 ORF9003 - 0.12 12.9 6.5 4.9 7.8 0.0 5.0 3 2 1 5 5 5 0 Vacuolar 14 Fab1-binding region HEAT PF02985.22 ORF9003 - 0.14 12.5 1.1 27 5.4 0.0 5.0 6 0 0 6 6 6 0 HEAT repeat SSB PF00436.25 ORF83400 - 6.2e-39 132.2 0.2 9.8e-39 131.6 0.2 1.3 1 0 0 1 1 1 1 Single-strand binding protein family Cation_efflux PF01545.21 ORF35092 - 1.6e-34 119.4 41.4 4.1e-34 118.1 41.4 1.6 1 1 0 1 1 1 1 Cation efflux family TIP120 PF08623.10 ORF35092 - 0.046 13.5 0.2 0.089 12.6 0.2 1.4 1 0 0 1 1 1 0 TATA-binding protein interacting (TIP20) DUF1700 PF08006.11 ORF35092 - 0.3 10.6 0.0 0.3 10.6 0.0 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1700) SUR7 PF06687.12 ORF35092 - 0.53 9.9 3.7 0.76 9.4 0.0 2.6 2 1 0 2 2 2 0 SUR7/PalI family MFS_1 PF07690.16 ORF26942 - 9.5e-17 60.9 8.9 1.5e-16 60.3 8.8 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF26942 - 1.4e-08 34.0 6.9 1.4e-08 34.0 6.9 3.7 3 2 1 4 4 4 2 Sugar (and other) transporter Laminin_G_3 PF13385.6 ORF115334 - 4.2e-06 27.0 0.3 9.8e-06 25.8 0.3 1.6 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily RCC1_2 PF13540.6 ORF106554 - 1.1e-18 66.5 26.5 0.0014 18.4 0.1 10.4 11 0 0 11 11 11 7 Regulator of chromosome condensation (RCC1) repeat Cutinase PF01083.22 ORF106554 - 0.051 13.5 1.7 11 6.0 0.0 4.8 4 3 3 7 7 7 0 Cutinase Lipocalin_7 PF14651.6 ORF106554 - 0.057 13.4 0.1 8.9 6.3 0.0 3.7 4 1 0 4 4 4 0 Lipocalin / cytosolic fatty-acid binding protein family PKD PF00801.20 ORF106554 - 1.1 9.1 4.0 41 4.1 0.1 3.8 4 0 0 4 4 4 0 PKD domain p450 PF00067.22 NODE_6642_length_1586_cov_95.849774_g4853_i0reverse_frame_1 - 3.9e-50 171.0 1.2 6e-50 170.3 1.2 1.2 1 0 0 1 1 1 1 Cytochrome P450 RE_MjaI PF09568.10 NODE_6642_length_1586_cov_95.849774_g4853_i0reverse_frame_1 - 0.065 13.1 0.3 0.17 11.7 0.3 1.6 1 0 0 1 1 1 0 MjaI restriction endonuclease Chloroa_b-bind PF00504.21 ORF92695 - 1.3e-71 240.3 2.3 3.2e-29 102.5 0.1 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein RCC1 PF00415.18 ORF88711 - 1.4e-77 256.1 8.1 6.1e-14 52.4 0.3 7.3 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF88711 - 7.6e-43 143.5 31.7 5.5e-12 45.2 1.5 8.1 8 0 0 8 8 8 7 Regulator of chromosome condensation (RCC1) repeat MIG-14_Wnt-bd PF06664.12 ORF87693 - 2.2e-19 69.8 33.4 2.5e-19 69.6 30.1 2.1 2 0 0 2 2 2 1 Wnt-binding factor required for Wnt secretion DUF2207 PF09972.9 ORF46197 - 0.24 10.1 0.3 0.31 9.8 0.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Nucleo_P87 PF07267.11 ORF46197 - 0.47 9.2 3.6 0.71 8.7 3.6 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 MORN PF02493.20 ORF33638 - 1.9e-50 165.9 83.4 1.6e-07 30.8 0.2 11.7 12 0 0 12 12 12 11 MORN repeat ING PF12998.7 ORF132761 - 3.5 8.3 6.6 36 5.0 0.1 3.7 3 2 1 4 4 4 0 Inhibitor of growth proteins N-terminal histone-binding RhoGAP PF00620.27 ORF132761 - 4.6 7.1 5.4 3.3 7.5 0.9 2.6 3 0 0 3 3 3 0 RhoGAP domain PARP PF00644.20 ORF129343 - 2e-53 180.9 0.0 2e-53 180.9 0.0 2.8 3 0 0 3 3 3 1 Poly(ADP-ribose) polymerase catalytic domain PARP_reg PF02877.14 ORF129343 - 1.1e-39 135.7 5.4 2.1e-38 131.5 5.1 2.5 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase, regulatory domain WGR PF05406.15 ORF129343 - 6e-17 61.5 0.2 6e-17 61.5 0.2 2.9 3 0 0 3 3 3 1 WGR domain TANGO2 PF05742.12 ORF129343 - 0.37 10.8 4.1 0.71 9.9 4.1 1.5 1 0 0 1 1 1 0 Transport and Golgi organisation 2 UvrA_inter PF17760.1 ORF129343 - 1.2 9.2 6.6 2.2 8.4 1.2 2.9 2 1 0 2 2 2 0 UvrA interaction domain AICARFT_IMPCHas PF01808.18 ORF124278 - 4.8e-120 400.5 3.8 6.1e-120 400.1 3.8 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 ORF124278 - 3.3e-32 110.5 0.0 7.6e-32 109.4 0.0 1.7 1 0 0 1 1 1 1 MGS-like domain LpxI_C PF06230.11 ORF124278 - 0.012 15.4 0.9 19 5.1 0.0 3.7 4 0 0 4 4 4 0 LpxI C-terminal domain NSP2_assoc PF14758.6 ORF124278 - 0.13 12.6 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein CoA_binding_2 PF13380.6 ORF124278 - 0.79 10.2 4.5 3.9 8.0 0.0 3.4 4 1 0 4 4 4 0 CoA binding domain PARP PF00644.20 ORF11781 - 2e-53 180.9 0.0 2e-53 180.9 0.0 2.8 3 0 0 3 3 3 1 Poly(ADP-ribose) polymerase catalytic domain PARP_reg PF02877.14 ORF11781 - 1.1e-39 135.7 5.4 2.1e-38 131.5 5.1 2.5 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase, regulatory domain WGR PF05406.15 ORF11781 - 6e-17 61.5 0.2 6e-17 61.5 0.2 2.9 3 0 0 3 3 3 1 WGR domain TANGO2 PF05742.12 ORF11781 - 0.37 10.8 4.1 0.71 9.9 4.1 1.5 1 0 0 1 1 1 0 Transport and Golgi organisation 2 UvrA_inter PF17760.1 ORF11781 - 1.2 9.2 6.6 2.2 8.4 1.2 2.9 2 1 0 2 2 2 0 UvrA interaction domain Chloroa_b-bind PF00504.21 ORF113950 - 1.3e-71 240.3 2.3 3.2e-29 102.5 0.1 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein Chloroa_b-bind PF00504.21 ORF105326 - 1.3e-71 240.3 2.3 3.2e-29 102.5 0.1 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein Chloroa_b-bind PF00504.21 ORF102225 - 1.3e-71 240.3 2.3 3.2e-29 102.5 0.1 3.2 3 0 0 3 3 3 3 Chlorophyll A-B binding protein AAA PF00004.29 ORF101577 - 3.6e-77 257.2 0.0 9.2e-46 155.5 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF101577 - 4.4e-25 87.2 6.8 5.8e-12 45.2 0.2 3.1 2 2 0 2 2 2 2 AAA+ lid domain AAA_2 PF07724.14 ORF101577 - 1e-08 35.5 0.0 0.0025 17.9 0.1 2.7 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 ORF101577 - 1.1e-06 29.1 0.1 0.0014 19.1 0.0 3.5 3 1 1 4 4 3 1 AAA ATPase domain RuvB_N PF05496.12 ORF101577 - 9.9e-06 25.4 0.0 0.00013 21.8 0.0 2.6 3 1 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 ORF101577 - 8.7e-05 22.5 0.3 0.046 13.7 0.0 3.3 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) Vps4_C PF09336.10 ORF101577 - 0.00017 21.5 0.1 0.0091 16.0 0.0 2.6 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_22 PF13401.6 ORF101577 - 0.00035 20.8 0.1 0.1 12.8 0.0 3.4 2 1 2 4 4 4 1 AAA domain AAA_14 PF13173.6 ORF101577 - 0.0007 19.6 0.0 0.11 12.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF101577 - 0.0017 18.5 0.0 0.0064 16.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF101577 - 0.0025 17.6 0.0 0.0045 16.7 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 ORF101577 - 0.0035 16.9 0.1 0.25 10.9 0.0 2.6 2 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 ORF101577 - 0.0038 17.6 0.0 0.01 16.2 0.0 1.8 1 0 0 1 1 1 1 RNA helicase TIP49 PF06068.13 ORF101577 - 0.0072 15.6 0.0 0.016 14.5 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain Bac_DnaA PF00308.18 ORF101577 - 0.0079 16.1 0.0 5 6.9 0.0 2.6 3 0 0 3 3 2 1 Bacterial dnaA protein Mg_chelatase PF01078.21 ORF101577 - 0.01 15.2 0.0 0.024 14.0 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 ORF101577 - 0.016 15.7 0.0 0.049 14.2 0.0 1.8 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 ORF101577 - 0.017 15.0 0.0 0.49 10.3 0.0 2.4 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea KAP_NTPase PF07693.14 ORF101577 - 0.038 13.2 0.0 0.49 9.6 0.0 2.3 2 1 1 3 3 3 0 KAP family P-loop domain NACHT PF05729.12 ORF101577 - 0.043 13.7 0.0 0.33 10.8 0.0 2.2 1 1 0 2 2 2 0 NACHT domain IstB_IS21 PF01695.17 ORF101577 - 0.046 13.5 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF101577 - 0.047 13.2 0.0 0.18 11.3 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF101577 - 0.055 14.0 0.0 0.2 12.2 0.0 1.9 2 0 0 2 2 2 0 ABC transporter DUF815 PF05673.13 ORF101577 - 0.067 12.4 0.0 0.17 11.0 0.0 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF815) AAA_28 PF13521.6 ORF101577 - 0.071 13.4 0.0 0.17 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF101577 - 0.09 12.5 0.0 3 7.5 0.0 2.8 2 1 0 2 2 2 0 Sigma-54 interaction domain ATPase PF06745.13 ORF101577 - 0.093 12.1 0.0 1.2 8.4 0.0 2.2 2 0 0 2 2 2 0 KaiC NTPase_1 PF03266.15 ORF101577 - 0.1 12.5 0.5 3.9 7.3 0.0 2.9 3 0 0 3 3 3 0 NTPase Rad17 PF03215.15 ORF101577 - 0.12 12.3 0.0 0.66 9.9 0.0 2.1 3 0 0 3 3 3 0 Rad17 P-loop domain TsaE PF02367.17 ORF101577 - 0.16 12.0 0.0 0.43 10.6 0.0 1.7 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 ORF101577 - 0.18 10.9 0.0 0.28 10.2 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 MFS_1 PF07690.16 ORF99966 - 4.8e-10 38.9 15.5 4.8e-10 38.9 15.5 2.0 3 1 0 3 3 3 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF99966 - 1.1e-09 37.8 24.1 4.1e-09 35.8 24.1 1.9 1 1 0 1 1 1 1 Sugar (and other) transporter PTS_EIIC PF02378.18 ORF88567 - 5.6e-28 97.9 32.5 5.6e-28 97.9 32.5 1.4 1 1 0 1 1 1 1 Phosphotransferase system, EIIC PTS_IIB PF02302.17 ORF88567 - 4.8e-18 65.7 0.1 9e-18 64.8 0.1 1.5 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DAO PF01266.24 ORF88567 - 0.12 12.0 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase Kelch_1 PF01344.25 ORF8464 - 1e-48 162.7 0.1 2.7e-09 36.5 0.0 6.4 6 0 0 6 6 6 6 Kelch motif Kelch_3 PF13415.6 ORF8464 - 5.5e-43 144.5 2.1 1.2e-07 31.8 0.1 6.5 7 0 0 7 7 7 5 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF8464 - 9.8e-40 133.6 4.6 3.4e-06 27.2 0.0 6.4 5 1 1 6 6 6 6 Kelch motif Kelch_4 PF13418.6 ORF8464 - 7e-37 125.2 6.5 3.4e-06 27.0 0.0 6.6 6 0 0 6 6 6 6 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF8464 - 1.5e-36 123.0 3.8 1.4e-06 28.1 0.1 6.7 6 0 0 6 6 6 6 Kelch motif Kelch_5 PF13854.6 ORF8464 - 3e-31 106.9 4.4 1.5e-06 28.1 0.0 6.5 6 0 0 6 6 6 6 Kelch motif BTB PF00651.31 ORF8464 - 4.4e-24 84.9 1.4 4.4e-23 81.6 0.5 2.3 1 1 1 2 2 2 1 BTB/POZ domain p450 PF00067.22 ORF83953 - 1.3e-46 159.3 3.2 1.9e-46 158.8 3.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 Glyco_hydro_38N PF01074.22 ORF83953 - 0.011 15.1 0.0 2.3 7.5 0.0 2.4 2 0 0 2 2 2 0 Glycosyl hydrolases family 38 N-terminal domain Ion_trans PF00520.31 ORF7356 - 3.8e-22 78.7 11.2 5.9e-22 78.1 11.2 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF7356 - 4.4e-07 29.3 0.0 0.0099 15.7 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF7356 - 1.4e-05 24.3 1.5 0.17 11.5 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF7356 - 0.00066 20.1 0.1 0.0015 18.9 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair DUF4386 PF14329.6 ORF7356 - 0.037 13.9 0.1 0.037 13.9 0.1 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4386) EF-hand_5 PF13202.6 ORF7356 - 0.051 13.1 13.3 0.15 11.6 0.1 4.1 6 0 0 6 6 6 0 EF hand DUF4919 PF16266.5 ORF7356 - 0.085 12.8 0.1 0.38 10.7 0.0 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4919) DnaJ PF00226.31 ORF7002 - 3.6e-24 84.7 5.9 1.1e-23 83.2 5.9 1.9 1 0 0 1 1 1 1 DnaJ domain Thioredoxin_6 PF13848.6 ORF7002 - 2.1e-13 50.6 19.2 0.0056 16.6 2.6 5.4 3 2 3 6 6 6 5 Thioredoxin-like domain Thioredoxin PF00085.20 ORF7002 - 3.1e-08 33.5 1.9 9.9e-05 22.3 0.1 3.5 3 0 0 3 3 3 2 Thioredoxin Thioredoxin_3 PF13192.6 ORF7002 - 0.0035 17.4 0.6 0.077 13.1 0.3 3.1 3 0 0 3 3 3 1 Thioredoxin domain RtcB PF01139.17 ORF59341 - 4.1e-71 240.3 0.3 4e-56 191.0 0.0 2.8 1 1 1 2 2 2 2 tRNA-splicing ligase RtcB RimK PF08443.11 ORF510 - 0.0074 15.9 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.6 ORF510 - 0.082 12.5 0.0 8 6.0 0.0 2.3 1 1 1 2 2 2 0 ATP-grasp domain Ion_trans PF00520.31 ORF30400 - 3.8e-22 78.7 11.2 5.9e-22 78.1 11.2 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF30400 - 4.4e-07 29.3 0.0 0.0099 15.7 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF30400 - 1.4e-05 24.3 1.5 0.17 11.5 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF30400 - 0.00066 20.1 0.1 0.0015 18.9 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair DUF4386 PF14329.6 ORF30400 - 0.037 13.9 0.1 0.037 13.9 0.1 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4386) EF-hand_5 PF13202.6 ORF30400 - 0.051 13.1 13.3 0.15 11.6 0.1 4.1 6 0 0 6 6 6 0 EF hand DUF4919 PF16266.5 ORF30400 - 0.085 12.8 0.1 0.38 10.7 0.0 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4919) YdfA_immunity PF12127.8 ORF19401 - 0.05 12.7 0.0 0.082 12.0 0.0 1.2 1 0 0 1 1 1 0 SigmaW regulon antibacterial Metallophos PF00149.28 ORF134252 - 6.5e-16 59.4 3.4 1.3e-15 58.5 3.4 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF134252 - 0.00022 21.5 0.0 0.015 15.5 0.0 2.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PhoD PF09423.10 ORF134252 - 0.00052 19.1 0.3 0.0054 15.8 0.2 2.0 2 0 0 2 2 2 1 PhoD-like phosphatase Na_H_Exchanger PF00999.21 ORF132002 - 1.6e-21 76.5 10.3 2.3e-21 76.0 10.3 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family BPD_transp_2 PF02653.16 ORF132002 - 0.0073 15.5 7.2 0.011 14.9 5.8 2.1 1 1 1 2 2 2 1 Branched-chain amino acid transport system / permease component Peptidase_M50B PF13398.6 ORF132002 - 0.07 12.8 5.6 0.074 12.7 4.3 1.7 1 1 0 1 1 1 0 Peptidase M50B-like DUF1430 PF07242.11 ORF132002 - 0.95 9.8 13.5 0.035 14.4 4.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1430) FUSC_2 PF13515.6 ORF132002 - 5.5 7.1 14.6 0.052 13.7 5.2 2.4 2 1 1 3 3 3 0 Fusaric acid resistance protein-like DUF2085 PF09858.9 ORF132002 - 9 6.9 11.2 0.28 11.7 1.9 2.9 3 0 0 3 3 3 0 Predicted membrane protein (DUF2085) EFG_IV PF03764.18 ORF118795 - 1.2e-20 73.5 0.0 3.9e-20 71.8 0.0 1.9 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF118795 - 1.2e-15 57.3 0.0 2.6e-15 56.2 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF118795 - 4.8e-15 55.7 0.1 8.3e-15 54.9 0.1 1.4 1 0 0 1 1 1 1 Elongation factor Tu domain 2 DUF2783 PF10932.8 ORF116540 - 0.033 13.9 0.2 0.16 11.7 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2783) Glyco_hydro_7 PF00840.20 ORF112729 - 3.1e-123 411.7 7.0 3.1e-123 411.7 7.0 1.9 2 0 0 2 2 2 1 Glycosyl hydrolase family 7 CBM_1 PF00734.18 ORF112729 - 1.8e-10 40.6 10.1 7.6e-10 38.6 10.1 2.2 1 0 0 1 1 1 1 Fungal cellulose binding domain Ion_trans PF00520.31 ORF106877 - 3.8e-22 78.7 11.2 5.9e-22 78.1 11.2 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF106877 - 4.4e-07 29.3 0.0 0.0099 15.7 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF106877 - 1.4e-05 24.3 1.5 0.17 11.5 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF106877 - 0.00066 20.1 0.1 0.0015 18.9 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair DUF4386 PF14329.6 ORF106877 - 0.037 13.9 0.1 0.037 13.9 0.1 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4386) EF-hand_5 PF13202.6 ORF106877 - 0.051 13.1 13.3 0.15 11.6 0.1 4.1 6 0 0 6 6 6 0 EF hand DUF4919 PF16266.5 ORF106877 - 0.085 12.8 0.1 0.38 10.7 0.0 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4919) HSP70 PF00012.20 ORF100906 - 3.7e-177 590.2 0.0 4.2e-177 590.0 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF100906 - 2.5e-16 59.4 0.1 4.7e-16 58.5 0.1 1.4 1 0 0 1 1 1 1 MreB/Mbl protein MFS_1 PF07690.16 ORF93786 - 2.3e-45 155.1 26.5 2.6e-36 125.3 14.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF93786 - 0.0032 16.0 6.8 0.0032 16.0 6.8 1.9 2 0 0 2 2 2 1 Transmembrane secretion effector SieB PF14163.6 ORF93786 - 0.058 12.9 1.6 36 3.8 0.0 4.4 5 0 0 5 5 5 0 Super-infection exclusion protein B Innexin PF00876.18 ORF93786 - 0.075 12.3 0.4 0.15 11.4 0.0 1.7 2 0 0 2 2 2 0 Innexin ATP-synt_ab PF00006.25 ORF81958 - 4.1e-48 163.9 0.0 5.5e-48 163.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 ORF81958 - 4.4e-23 82.0 0.3 8e-23 81.1 0.3 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain TMEM154 PF15102.6 ORF74268 - 1.1e-05 25.4 3.3 4.3e-05 23.4 0.2 2.6 2 1 0 2 2 2 1 TMEM154 protein family Rax2 PF12768.7 ORF74268 - 3.4e-05 23.4 6.9 0.00068 19.2 6.9 2.7 1 1 0 1 1 1 1 Cortical protein marker for cell polarity Podoplanin PF05808.11 ORF74268 - 0.00013 22.1 5.5 0.0003 20.9 5.5 1.7 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF74268 - 0.00079 18.9 0.6 0.00079 18.9 0.6 1.9 2 0 0 2 2 2 1 Family of unknown function (DUF5305) EphA2_TM PF14575.6 ORF74268 - 0.0082 17.0 0.1 0.072 14.0 0.0 2.4 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain MtrF PF09472.10 ORF74268 - 0.018 14.4 0.7 0.057 12.8 0.7 1.9 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Amnionless PF14828.6 ORF74268 - 0.03 13.1 0.0 0.049 12.5 0.0 1.3 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 ORF74268 - 0.077 13.6 4.1 0.11 13.1 1.0 2.5 1 1 1 2 2 2 0 Small Novel Rich in Cartilage Protocadherin PF08374.11 ORF74268 - 0.14 12.2 0.1 0.14 12.2 0.1 1.8 2 1 0 2 2 1 0 Protocadherin Adeno_E3_CR2 PF02439.15 ORF74268 - 0.2 11.4 2.5 0.4 10.5 2.5 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 FixQ PF05545.11 ORF74268 - 2.9 7.9 5.0 0.42 10.6 0.2 2.1 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ Acyl_transf_3 PF01757.22 ORF57707 - 1.8e-20 73.3 50.2 2.3e-20 73.0 50.2 1.1 1 0 0 1 1 1 1 Acyltransferase family p450 PF00067.22 ORF33098 - 2.1e-51 175.1 0.1 1.1e-50 172.8 0.1 1.8 1 1 0 1 1 1 1 Cytochrome P450 Sod_Cu PF00080.20 ORF2778 - 1.3e-12 48.1 8.8 3.2e-06 27.4 0.2 4.5 3 2 0 3 3 3 3 Copper/zinc superoxide dismutase (SODC) Sod_Cu PF00080.20 ORF2430 - 1.3e-12 48.1 8.8 3.2e-06 27.4 0.2 4.5 3 2 0 3 3 3 3 Copper/zinc superoxide dismutase (SODC) RRM_1 PF00076.22 ORF20344 - 2.1e-19 69.1 1.0 1.5e-11 44.0 0.0 4.7 4 1 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF20344 - 0.047 13.6 0.0 1.3 8.9 0.0 2.6 2 0 0 2 2 2 0 Occluded RNA-recognition motif CDC45 PF02724.14 ORF20344 - 3.5 5.8 19.9 5.4 5.2 19.9 1.2 1 0 0 1 1 1 0 CDC45-like protein Dsh_C PF12316.8 ORF20344 - 4.6 7.6 14.3 3.8 7.9 5.2 2.8 3 0 0 3 3 3 0 Segment polarity protein dishevelled (Dsh) C terminal TMEM154 PF15102.6 ORF151259 - 1.1e-05 25.3 3.3 4.3e-05 23.4 0.2 2.6 2 1 0 2 2 2 1 TMEM154 protein family Rax2 PF12768.7 ORF151259 - 3.4e-05 23.4 6.9 0.00068 19.2 6.9 2.7 1 1 0 1 1 1 1 Cortical protein marker for cell polarity Podoplanin PF05808.11 ORF151259 - 0.00013 22.1 5.5 0.0003 20.9 5.5 1.7 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF151259 - 0.00079 18.9 0.6 0.00079 18.9 0.6 1.9 2 0 0 2 2 2 1 Family of unknown function (DUF5305) EphA2_TM PF14575.6 ORF151259 - 0.0076 17.1 0.1 0.068 14.1 0.0 2.4 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain MtrF PF09472.10 ORF151259 - 0.018 14.4 0.7 0.057 12.8 0.7 1.9 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Amnionless PF14828.6 ORF151259 - 0.03 13.2 0.0 0.048 12.5 0.0 1.3 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 ORF151259 - 0.077 13.6 4.1 0.11 13.1 1.0 2.5 1 1 1 2 2 2 0 Small Novel Rich in Cartilage Protocadherin PF08374.11 ORF151259 - 0.17 11.8 0.1 0.17 11.8 0.1 1.8 2 1 0 2 2 1 0 Protocadherin Adeno_E3_CR2 PF02439.15 ORF151259 - 0.2 11.4 2.5 0.4 10.5 2.5 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 FixQ PF05545.11 ORF151259 - 2.9 7.9 5.0 0.42 10.6 0.2 2.1 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ TMEM154 PF15102.6 ORF128338 - 1.1e-05 25.4 3.3 4.3e-05 23.4 0.2 2.6 2 1 0 2 2 2 1 TMEM154 protein family Rax2 PF12768.7 ORF128338 - 3.4e-05 23.4 6.9 0.00068 19.2 6.9 2.7 1 1 0 1 1 1 1 Cortical protein marker for cell polarity Podoplanin PF05808.11 ORF128338 - 0.00013 22.1 5.5 0.0003 20.9 5.5 1.7 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF128338 - 0.00079 18.9 0.6 0.00079 18.9 0.6 1.9 2 0 0 2 2 2 1 Family of unknown function (DUF5305) EphA2_TM PF14575.6 ORF128338 - 0.0082 17.0 0.1 0.072 14.0 0.0 2.4 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain MtrF PF09472.10 ORF128338 - 0.018 14.4 0.7 0.057 12.8 0.7 1.9 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Amnionless PF14828.6 ORF128338 - 0.03 13.1 0.0 0.049 12.5 0.0 1.3 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 ORF128338 - 0.077 13.6 4.1 0.11 13.1 1.0 2.5 1 1 1 2 2 2 0 Small Novel Rich in Cartilage Protocadherin PF08374.11 ORF128338 - 0.14 12.2 0.1 0.14 12.2 0.1 1.8 2 1 0 2 2 1 0 Protocadherin Adeno_E3_CR2 PF02439.15 ORF128338 - 0.2 11.4 2.5 0.4 10.5 2.5 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 FixQ PF05545.11 ORF128338 - 2.9 7.9 5.0 0.42 10.6 0.2 2.1 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ RRM_1 PF00076.22 ORF126825 - 4.6e-16 58.4 0.0 1.1e-15 57.2 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) U1snRNP70_N PF12220.8 ORF126825 - 0.0093 16.6 0.5 0.0093 16.6 0.5 5.9 3 2 0 3 3 3 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal C2 PF00168.30 ORF120512 - 3.6e-31 107.5 0.0 1.2e-14 54.5 0.0 2.4 2 0 0 2 2 2 2 C2 domain TMEM154 PF15102.6 ORF115685 - 1.1e-05 25.4 3.3 4.3e-05 23.4 0.2 2.6 2 1 0 2 2 2 1 TMEM154 protein family Rax2 PF12768.7 ORF115685 - 3.4e-05 23.4 6.9 0.00068 19.2 6.9 2.7 1 1 0 1 1 1 1 Cortical protein marker for cell polarity Podoplanin PF05808.11 ORF115685 - 0.00013 22.1 5.5 0.0003 20.9 5.5 1.7 1 1 0 1 1 1 1 Podoplanin DUF5305 PF17231.2 ORF115685 - 0.00079 18.9 0.6 0.00079 18.9 0.6 1.9 2 0 0 2 2 2 1 Family of unknown function (DUF5305) EphA2_TM PF14575.6 ORF115685 - 0.0082 17.0 0.1 0.072 14.0 0.0 2.4 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain MtrF PF09472.10 ORF115685 - 0.018 14.4 0.7 0.057 12.8 0.7 1.9 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Amnionless PF14828.6 ORF115685 - 0.03 13.1 0.0 0.049 12.5 0.0 1.3 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 ORF115685 - 0.077 13.6 4.1 0.11 13.1 1.0 2.5 1 1 1 2 2 2 0 Small Novel Rich in Cartilage Protocadherin PF08374.11 ORF115685 - 0.14 12.2 0.1 0.14 12.2 0.1 1.8 2 1 0 2 2 1 0 Protocadherin Adeno_E3_CR2 PF02439.15 ORF115685 - 0.2 11.4 2.5 0.4 10.5 2.5 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 FixQ PF05545.11 ORF115685 - 2.9 7.9 5.0 0.42 10.6 0.2 2.1 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ Sod_Cu PF00080.20 ORF102066 - 1.3e-12 48.1 8.8 3.2e-06 27.4 0.2 4.5 3 2 0 3 3 3 3 Copper/zinc superoxide dismutase (SODC) WD40 PF00400.32 ORF10078 - 1e-18 67.3 12.0 0.00025 21.8 0.0 5.7 5 0 0 5 5 5 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF10078 - 3.1e-06 27.4 0.1 0.81 10.0 0.0 4.1 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain PQQ PF01011.21 ORF10078 - 0.00041 20.1 0.4 0.0097 15.8 0.0 3.1 4 0 0 4 4 4 1 PQQ enzyme repeat Ge1_WD40 PF16529.5 ORF10078 - 0.00049 19.2 0.1 0.027 13.5 0.0 2.5 2 0 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Cytochrom_D1 PF02239.16 ORF10078 - 0.0045 15.6 0.3 0.12 10.9 0.0 3.0 2 1 1 3 3 3 1 Cytochrome D1 heme domain PQQ_3 PF13570.6 ORF10078 - 0.13 12.8 0.0 1 10.0 0.0 2.5 2 0 0 2 2 2 0 PQQ-like domain Ank_5 PF13857.6 ORF95778 - 1.9e-25 88.6 0.2 1.6e-07 31.5 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF95778 - 7.9e-25 87.3 0.0 9.2e-09 35.8 0.0 3.4 3 0 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF95778 - 2e-21 76.1 0.8 9e-06 26.1 0.0 4.3 3 1 1 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF95778 - 1.2e-20 71.4 0.0 0.0039 17.6 0.0 5.7 5 0 0 5 5 5 5 Ankyrin repeat Ank PF00023.30 ORF95778 - 6.8e-15 54.7 0.0 0.0038 17.6 0.0 6.3 6 0 0 6 6 6 3 Ankyrin repeat DUF1319 PF07028.11 ORF95778 - 0.34 11.2 1.6 2.6 8.3 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1319) Asp PF00026.23 ORF94852 - 1.1e-20 74.3 0.1 1.5e-20 73.8 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF94852 - 0.0027 17.5 0.0 0.0048 16.7 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal MFS_2 PF13347.6 ORF94729 - 8.2e-24 83.9 25.1 2.7e-23 82.2 25.1 1.9 1 1 0 1 1 1 1 MFS/sugar transport protein Zn_peptidase_2 PF04298.12 ORF94729 - 0.038 13.4 0.5 1.1 8.6 0.0 2.5 2 0 0 2 2 2 0 Putative neutral zinc metallopeptidase PAP2_3 PF14378.6 ORF94729 - 0.55 9.9 5.7 0.46 10.1 1.2 2.9 3 1 0 3 3 3 0 PAP2 superfamily HATPase_c PF02518.26 ORF85578 - 5.5e-21 75.2 0.0 1.2e-20 74.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 ORF85578 - 5.8e-16 58.6 0.9 9.9e-15 54.7 0.0 3.0 3 0 0 3 3 3 1 HAMP domain HisKA PF00512.25 ORF85578 - 2.4e-13 49.9 1.2 5e-13 48.9 0.1 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 ORF85578 - 0.2 11.6 0.0 0.42 10.5 0.0 1.5 1 0 0 1 1 1 0 GHKL domain betaPIX_CC PF16523.5 ORF85578 - 0.22 11.3 0.2 0.53 10.1 0.2 1.6 1 0 0 1 1 1 0 betaPIX coiled coil Glyco_hydro_71 PF03659.14 ORF6844 - 7.8e-07 28.2 0.0 0.00054 18.9 0.0 2.1 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF6844 - 0.00069 19.2 0.0 0.8 9.1 0.0 2.3 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF6844 - 0.0049 16.0 0.0 0.085 12.0 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 Asp PF00026.23 ORF68168 - 7.5e-21 74.9 0.1 1e-20 74.4 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF68168 - 0.0027 17.5 0.0 0.0048 16.7 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Glyco_hydro_71 PF03659.14 ORF62935 - 7e-07 28.4 0.0 0.00054 18.9 0.0 2.1 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF62935 - 0.0008 19.0 0.0 0.8 9.1 0.0 2.3 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF62935 - 0.0014 17.8 0.1 0.025 13.7 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 DUF5349 PF17298.2 ORF55994 - 8.9 6.0 10.8 1.3 8.7 0.2 3.2 2 2 2 4 4 4 0 Family of unknown function (DUF5349) Glyco_hydro_71 PF03659.14 ORF52369 - 7e-07 28.4 0.0 0.00054 18.9 0.0 2.1 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF52369 - 0.0008 19.0 0.0 0.8 9.1 0.0 2.3 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF52369 - 0.0014 17.8 0.1 0.025 13.7 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 Glyco_hydro_71 PF03659.14 ORF36575 - 7e-07 28.4 0.0 0.00054 18.9 0.0 2.1 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF36575 - 0.0008 19.0 0.0 0.8 9.1 0.0 2.3 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF36575 - 0.0014 17.8 0.1 0.025 13.7 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 Laminin_G_3 PF13385.6 ORF35939 - 4.1e-06 27.0 0.3 9.7e-06 25.8 0.3 1.6 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily SHOCT PF09851.9 ORF30653 - 0.19 11.5 2.4 0.23 11.3 0.3 2.2 2 0 0 2 2 2 0 Short C-terminal domain IZUMO PF15005.6 ORF30653 - 1.5 9.4 4.9 0.48 10.9 1.8 1.8 2 0 0 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated FBPase_glpX PF03320.13 ORF20482 - 7.3e-86 287.8 1.4 1.2e-85 287.1 1.4 1.4 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NAD_binding_1 PF00175.21 ORF20482 - 1.4e-19 70.7 0.0 2.8e-19 69.8 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF20482 - 2.5e-07 30.9 0.0 7e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF20482 - 0.0022 18.1 0.0 0.15 12.2 0.0 2.9 2 1 0 3 3 3 1 Ferric reductase NAD binding domain Glyco_hydro_71 PF03659.14 ORF15332 - 6.2e-07 28.6 0.0 0.00052 18.9 0.0 2.1 2 0 0 2 2 2 2 Glycosyl hydrolase family 71 Glyco_tran_WbsX PF14307.6 ORF15332 - 0.0007 19.2 0.0 0.67 9.3 0.0 2.3 2 0 0 2 2 2 2 Glycosyltransferase WbsX Glyco_hydro_99 PF16317.5 ORF15332 - 0.0014 17.8 0.1 0.025 13.7 0.0 2.1 2 0 0 2 2 2 1 Glycosyl hydrolase family 99 Asp PF00026.23 ORF135300 - 4.8e-20 72.2 0.1 6.6e-20 71.8 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF135300 - 0.0026 17.6 0.0 0.0048 16.7 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Aa_trans PF01490.18 ORF129959 - 4.2e-34 118.0 28.7 6.5e-34 117.3 28.7 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein IncE PF17627.2 ORF129959 - 0.8 9.7 4.9 0.23 11.4 0.2 2.5 2 0 0 2 2 2 0 Inclusion membrane protein E Mito_carr PF00153.27 ORF104500 - 8.4e-38 128.2 1.3 2e-14 53.3 0.1 3.3 3 0 0 3 3 3 3 Mitochondrial carrier protein BCCT PF02028.17 ORF9811 - 6.1e-150 499.9 32.4 7.1e-150 499.6 32.4 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter MORN PF02493.20 ORF92623 - 6.7e-08 32.0 46.5 1.6e-05 24.5 3.7 7.9 8 0 0 8 8 8 5 MORN repeat bZIP_1 PF00170.21 ORF80399 - 7.7e-07 29.1 13.0 7.7e-07 29.1 13.0 3.1 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF80399 - 2.2e-06 27.6 13.4 2.2e-06 27.6 13.4 2.9 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF80399 - 0.062 13.1 1.1 0.14 12.0 1.1 1.5 1 0 0 1 1 1 0 Peptidase M76 family DUF5320 PF17253.2 ORF80399 - 1.3 10.1 3.7 1 10.4 1.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) SecD-TM1 PF13721.6 ORF80399 - 6.6 7.3 6.1 1.4 9.4 0.9 2.5 2 0 0 2 2 2 0 SecD export protein N-terminal TM region MORN PF02493.20 ORF64185 - 2.7e-10 39.5 49.3 1.1e-06 28.1 2.7 8.6 8 1 1 9 9 9 4 MORN repeat DUF3048_C PF17479.2 ORF64185 - 0.0062 16.9 9.1 0.19 12.1 3.5 2.7 2 0 0 2 2 2 2 Protein of unknown function (DUF3048) C-terminal domain p450 PF00067.22 ORF6126 - 1.7e-45 155.7 0.0 3.6e-45 154.6 0.0 1.5 1 1 0 1 1 1 1 Cytochrome P450 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks18.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks18.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks18.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks18.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- EF-hand_8 PF13833.6 ORF22909 - 1.3e-06 28.1 1.1 3.2e-06 26.9 1.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF22909 - 2.6e-06 26.6 0.5 9.3e-06 24.8 0.5 2.0 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 ORF22909 - 7e-05 22.1 1.7 0.00017 20.9 1.3 2.0 1 1 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF22909 - 9.5e-05 22.8 0.7 0.00026 21.4 0.7 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF22909 - 0.00022 20.9 0.4 0.00022 20.9 0.4 2.4 3 0 0 3 3 3 1 EF-hand domain p25-alpha PF05517.12 ORF22909 - 0.018 15.2 0.2 0.018 15.2 0.2 1.8 1 1 0 2 2 2 0 p25-alpha EF-hand_4 PF12763.7 ORF22909 - 0.018 15.0 0.2 0.032 14.2 0.2 1.5 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand KH_dom-like PF14714.6 ORF22628 - 0.018 15.3 0.2 0.026 14.8 0.2 1.3 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DUF4777 PF16007.5 ORF20873 - 0.1 12.8 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) SWIRM-assoc_2 PF16496.5 ORF19883 - 0.056 12.3 0.0 0.35 9.7 0.0 1.9 2 0 0 2 2 2 0 SWIRM-associated domain at the N-terminal BRCC36_C PF18110.1 ORF19883 - 0.16 12.2 1.6 13 6.0 0.1 2.2 2 0 0 2 2 2 0 BRCC36 C-terminal helical domain PDZ_1 PF12812.7 ORF19674 - 0.023 14.7 0.1 0.073 13.1 0.0 1.8 2 0 0 2 2 2 0 PDZ-like domain Mito_morph_reg PF14972.6 ORF18773 - 2.8 7.5 5.7 3.3 7.3 5.3 1.5 1 1 0 1 1 1 0 Mitochondrial morphogenesis regulator PTPS PF01242.19 ORF18656 - 0.17 11.9 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase MSA-2c PF12238.8 ORF1717 - 1.7 8.6 5.7 1.9 8.4 5.7 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Cys_rich_CPXG PF14255.6 ORF15976 - 0.015 15.2 0.4 4.7 7.2 0.0 2.3 2 0 0 2 2 2 0 Cysteine-rich CPXCG DUF1148 PF06618.11 ORF15976 - 0.1 12.7 4.8 0.16 12.2 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1148) DUF2633 PF11119.8 ORF152911 - 4.7 7.2 6.6 0.59 10.1 1.6 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2633) HMGL-like PF00682.19 ORF152069 - 1.8e-15 57.2 0.0 2.2e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 HMGL-like DUF1804 PF08822.11 ORF152069 - 0.096 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) Gemini_V2 PF01524.17 ORF151935 - 0.11 12.7 0.9 0.16 12.1 0.2 1.7 2 1 0 2 2 2 0 Geminivirus V2 protein SASP_gamma PF04259.14 ORF150972 - 0.061 13.8 0.3 0.12 12.8 0.3 1.4 1 0 0 1 1 1 0 Small, acid-soluble spore protein, gamma-type HTH_Tnp_1 PF01527.20 ORF150784 - 1e-08 35.3 3.5 1.5e-08 34.8 3.5 1.3 1 0 0 1 1 1 1 Transposase HTH_23 PF13384.6 ORF150784 - 0.0084 15.9 0.4 0.032 14.0 0.2 2.0 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 ORF150784 - 0.023 14.8 0.1 0.06 13.5 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2828 PF11443.8 ORF150784 - 0.066 11.3 2.9 0.07 11.2 2.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) CCDC-167 PF15188.6 ORF150784 - 0.094 13.1 6.5 0.079 13.3 5.5 1.5 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF334 PF03904.13 ORF149997 - 0.34 10.4 5.0 0.74 9.3 5.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF334) Adeno_E3_CR2 PF02439.15 ORF149698 - 0.15 11.9 1.1 0.25 11.1 1.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Flu_M2 PF00599.17 ORF149698 - 0.38 10.9 3.2 14 5.9 0.1 2.2 1 1 1 2 2 2 0 Influenza Matrix protein (M2) Myticin-prepro PF10690.9 ORF149142 - 0.081 13.2 0.4 5.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel DAP10 PF07213.11 ORF149142 - 0.11 12.4 1.5 0.29 11.1 0.1 2.1 2 1 1 3 3 3 0 DAP10 membrane protein DUF3367 PF11847.8 ORF148806 - 0.048 11.5 2.5 0.056 11.3 2.5 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase TPIP1 PF15338.6 ORF148575 - 0.069 13.2 1.9 0.088 12.9 0.9 1.7 2 0 0 2 2 2 0 p53-regulated apoptosis-inducing protein 1 UPF0014 PF03649.13 ORF147839 - 0.0077 15.6 0.1 0.012 15.0 0.1 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) DUF1681 PF07933.14 ORF146790 - 0.062 13.0 0.0 0.062 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) SOG2 PF10428.9 ORF144033 - 1.5 7.9 9.6 1.7 7.7 9.6 1.0 1 0 0 1 1 1 0 RAM signalling pathway protein STIL_N PF15253.6 ORF14354 - 0.13 11.2 0.4 0.19 10.6 0.4 1.2 1 0 0 1 1 1 0 SCL-interrupting locus protein N-terminus RmuC PF02646.16 ORF143054 - 0.0079 15.4 0.1 0.01 15.0 0.1 1.1 1 0 0 1 1 1 1 RmuC family DUF2706 PF10913.8 ORF142877 - 0.81 9.6 2.9 8 6.4 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2706) CAF1A PF12253.8 ORF141422 - 0.2 11.9 7.1 0.28 11.4 7.1 1.2 1 0 0 1 1 1 0 Chromatin assembly factor 1 subunit A VF530 PF09905.9 ORF141185 - 0.024 14.8 0.3 2 8.7 0.1 2.3 2 0 0 2 2 2 0 DNA-binding protein VF530 DUF790 PF05626.11 ORF141185 - 0.028 13.1 0.0 0.034 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF790) Kelch_3 PF13415.6 ORF14099 - 0.098 13.0 0.2 0.19 12.1 0.2 1.5 1 0 0 1 1 1 0 Galactose oxidase, central domain MFS_1 PF07690.16 ORF140734 - 3.6e-07 29.5 2.6 4.1e-07 29.3 2.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4186 PF13811.6 ORF140500 - 2 8.5 7.8 3.8 7.6 7.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4186) DUF4298 PF14131.6 ORF139808 - 0.0046 16.9 3.0 0.0068 16.3 0.5 2.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4298) DASH_Dad1 PF08649.10 ORF139808 - 0.11 12.8 1.7 0.66 10.2 0.6 2.3 2 0 0 2 2 2 0 DASH complex subunit Dad1 DUF4413 PF14372.6 ORF139808 - 0.21 12.0 2.6 0.87 10.0 2.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4413) PP-binding PF00550.25 ORF136781 - 5.4e-11 42.7 0.1 8.1e-11 42.1 0.1 1.3 1 0 0 1 1 1 1 Phosphopantetheine attachment site YqjK PF13997.6 ORF13667 - 0.11 12.7 0.5 0.16 12.2 0.5 1.2 1 0 0 1 1 1 0 YqjK-like protein SVIP PF15811.5 ORF133961 - 0.01 16.3 2.7 0.01 16.3 2.7 2.3 2 0 0 2 2 2 0 Small VCP/p97-interacting protein FAM47 PF14642.6 ORF133961 - 0.13 11.8 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 FAM47 family DUF3985 PF13153.6 ORF133128 - 0.52 10.4 0.1 0.52 10.4 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3985) Antifungal_prot PF11402.8 ORF132766 - 0.046 14.0 1.8 0.057 13.7 0.6 1.7 1 1 0 1 1 1 0 Antifungal protein RsfS PF02410.15 ORF131424 - 0.12 12.8 0.1 0.18 12.2 0.1 1.3 1 1 0 1 1 1 0 Ribosomal silencing factor during starvation Sporozoite_P67 PF05642.11 ORF129384 - 9.4 4.2 5.9 10 4.1 5.9 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF202 PF02656.15 ORF129166 - 1.8e-09 37.9 8.8 5e-08 33.3 8.8 2.2 1 1 0 1 1 1 1 Domain of unknown function (DUF202) Binary_toxB_2 PF17475.2 ORF129127 - 0.029 14.1 1.0 0.035 13.8 1.0 1.1 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA domain 2 DUF1922 PF09082.10 ORF128203 - 0.36 11.2 0.2 0.36 11.2 0.2 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF1922) zf-C2H2_11 PF16622.5 ORF128144 - 0.2 11.4 3.3 0.65 9.8 3.3 1.9 1 0 0 1 1 1 0 zinc-finger C2H2-type RabGAP-TBC PF00566.18 ORF126903 - 0.00051 19.8 0.9 0.63 9.6 0.1 2.2 2 0 0 2 2 2 2 Rab-GTPase-TBC domain Acetyltransf_1 PF00583.25 ORF126636 - 7.9e-06 26.1 0.0 8.4e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF126636 - 0.0029 18.0 0.1 0.0039 17.6 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF126636 - 0.014 15.3 0.1 0.021 14.7 0.1 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain UPF0227 PF05728.12 ORF125892 - 0.029 14.3 0.4 0.19 11.6 0.0 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) PHD_3 PF13922.6 ORF124916 - 0.041 14.3 0.6 0.059 13.8 0.6 1.3 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx eIF-3c_N PF05470.12 ORF123770 - 1.6e-09 36.7 2.6 1.6e-09 36.7 2.6 1.3 1 1 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 8 N-terminus UvsY PF11056.8 ORF123770 - 0.057 13.8 2.8 0.18 12.1 2.8 1.7 1 1 1 2 2 2 0 Recombination, repair and ssDNA binding protein UvsY EF-hand_12 PF17901.1 ORF123770 - 0.088 13.3 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 EF-hand fold domain CDC45 PF02724.14 ORF123770 - 0.12 10.6 5.1 0.15 10.3 5.1 1.0 1 0 0 1 1 1 0 CDC45-like protein RP-C_C PF11800.8 ORF123770 - 0.33 11.0 0.2 0.33 11.0 0.2 1.8 1 1 1 2 2 2 0 Replication protein C C-terminal region TMPIT PF07851.13 ORF123770 - 0.41 9.9 3.6 0.48 9.6 3.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein Dsh_C PF12316.8 ORF123770 - 0.52 10.7 2.7 0.57 10.6 2.7 1.0 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal FlxA PF14282.6 ORF123770 - 1.9 8.5 7.6 2.1 8.4 1.4 2.1 1 1 1 2 2 2 0 FlxA-like protein Adeno_E3_CR2 PF02439.15 ORF121711 - 0.15 11.9 1.1 0.25 11.1 1.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Flu_M2 PF00599.17 ORF121711 - 0.38 10.9 3.2 14 5.9 0.1 2.2 1 1 1 2 2 2 0 Influenza Matrix protein (M2) DUF1681 PF07933.14 ORF121528 - 0.062 13.0 0.0 0.062 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) MORN PF02493.20 ORF121060 - 2.3e-10 39.7 28.6 0.00025 20.8 2.2 4.5 4 0 0 4 4 4 4 MORN repeat DUF3048_C PF17479.2 ORF121060 - 0.013 15.8 3.1 0.023 15.1 1.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain Ank_2 PF12796.7 ORF120871 - 9.6e-07 29.3 0.0 2.6e-06 27.9 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF120871 - 2.9e-05 24.3 0.4 0.032 14.5 0.2 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF120871 - 0.0003 21.3 0.0 2.1 9.0 0.0 2.8 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF120871 - 0.001 19.4 0.1 0.065 13.7 0.1 2.4 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 ORF120871 - 0.021 15.3 0.0 5.8 7.8 0.0 2.7 2 0 0 2 2 2 0 Ankyrin repeat HA70_C PF17993.1 ORF118176 - 0.16 12.0 1.5 0.22 11.6 0.1 1.9 2 1 0 2 2 2 0 Haemagglutinin 70 C-terminal domain TMEM132 PF16070.5 ORF11759 - 0.0053 16.1 0.1 0.0074 15.7 0.1 1.1 1 0 0 1 1 1 1 Transmembrane protein family 132 AhpC-TSA PF00578.21 ORF117554 - 0.13 12.1 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA family LCE6A PF15858.5 ORF11742 - 0.041 14.6 5.3 0.041 14.6 5.3 2.0 2 1 0 2 2 2 0 Late cornified envelope protein 6A family Adeno_E3_CR2 PF02439.15 ORF117336 - 0.15 11.9 1.1 0.25 11.1 1.1 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Flu_M2 PF00599.17 ORF117336 - 0.64 10.1 3.9 14 5.9 0.1 2.2 1 1 0 2 2 2 0 Influenza Matrix protein (M2) DUF4696 PF15767.5 ORF115942 - 0.02 13.5 0.5 0.022 13.4 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4696) FAD_binding_3 PF01494.19 ORF115942 - 0.061 12.6 0.1 0.078 12.2 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain GTP_EFTU_D3 PF03143.17 ORF115942 - 0.1 12.9 0.3 0.19 12.1 0.3 1.4 1 0 0 1 1 1 0 Elongation factor Tu C-terminal domain Fer2 PF00111.27 ORF115261 - 0.065 13.2 0.0 0.13 12.3 0.0 1.5 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain DUF1242 PF06842.12 ORF114333 - 2.7 7.8 6.3 66 3.4 5.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1242) zf-C3HC4_3 PF13920.6 ORF11330 - 2.3e-10 40.1 12.7 3.9e-10 39.4 12.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF11330 - 2.1e-06 27.5 13.6 3.9e-06 26.6 13.6 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 DUF5489 PF17592.2 ORF11330 - 0.097 13.2 0.2 0.15 12.6 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5489) CD20 PF04103.15 ORF11330 - 0.11 12.6 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 CD20-like family zf-RING_5 PF14634.6 ORF11330 - 0.15 12.1 13.6 0.29 11.1 13.6 1.5 1 0 0 1 1 1 0 zinc-RING finger domain Acetyltransf_1 PF00583.25 ORF109828 - 7.9e-06 26.1 0.0 8.4e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF109828 - 0.0029 18.0 0.1 0.0039 17.6 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF109828 - 0.014 15.3 0.1 0.021 14.7 0.1 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF936 PF06075.12 ORF108739 - 0.2 10.6 0.1 0.18 10.7 0.1 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) Stc1 PF12898.7 ORF107149 - 0.03 14.9 0.9 1.6 9.3 0.0 2.3 2 1 0 2 2 2 0 Stc1 domain FGFR3_TM PF18123.1 ORF107149 - 2.7 7.6 10.2 4.7 6.8 0.5 3.7 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain Pex14_N PF04695.13 ORF106752 - 0.33 11.6 9.1 0.43 11.2 9.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region SNARE_assoc PF09335.11 ORF106438 - 0.00052 20.5 0.3 0.12 12.8 1.1 2.1 2 0 0 2 2 2 1 SNARE associated Golgi protein Connexin PF00029.19 ORF106438 - 0.00072 19.4 0.8 0.00096 19.0 0.8 1.1 1 0 0 1 1 1 1 Connexin DUF4834 PF16118.5 ORF106438 - 0.004 18.1 0.4 0.0064 17.4 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) Serinc PF03348.15 ORF106438 - 0.0041 16.1 0.3 0.0047 15.9 0.3 1.1 1 0 0 1 1 1 1 Serine incorporator (Serinc) Nucleoside_tran PF01733.18 ORF106438 - 0.0061 16.0 0.4 0.0069 15.8 0.4 1.2 1 0 0 1 1 1 1 Nucleoside transporter FAM176 PF14851.6 ORF106438 - 0.008 15.8 1.2 0.01 15.5 1.2 1.2 1 0 0 1 1 1 1 FAM176 family DUF4407 PF14362.6 ORF106438 - 0.0083 15.5 0.3 0.0087 15.4 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Orthopox_A36R PF05950.11 ORF106438 - 0.01 16.0 0.0 0.016 15.4 0.0 1.3 1 0 0 1 1 1 0 Orthopoxvirus A36R protein DUF3169 PF11368.8 ORF106438 - 0.01 15.4 0.5 0.013 15.1 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3169) SID-1_RNA_chan PF13965.6 ORF106438 - 0.012 14.1 0.5 0.013 13.9 0.5 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 V_ATPase_I PF01496.19 ORF106438 - 0.013 13.4 1.1 0.015 13.2 1.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Ureide_permease PF07168.11 ORF106438 - 0.014 14.1 0.3 0.017 13.9 0.3 1.1 1 0 0 1 1 1 0 Ureide permease DUF4199 PF13858.6 ORF106438 - 0.017 15.5 0.3 0.032 14.6 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Presenilin PF01080.17 ORF106438 - 0.029 13.1 0.3 0.028 13.2 0.3 1.2 1 0 0 1 1 1 0 Presenilin Acatn PF13000.7 ORF106438 - 0.047 12.2 0.1 0.053 12.0 0.1 1.1 1 0 0 1 1 1 0 Acetyl-coenzyme A transporter 1 CLN3 PF02487.17 ORF106438 - 0.052 12.6 0.3 0.072 12.1 0.3 1.1 1 0 0 1 1 1 0 CLN3 protein OATP PF03137.20 ORF106438 - 0.056 11.7 0.1 0.056 11.7 0.1 1.5 2 0 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family G0-G1_switch_2 PF15103.6 ORF106438 - 0.063 13.7 4.8 0.12 12.8 4.8 1.6 1 1 0 1 1 1 0 G0/G1 switch protein 2 Vpu PF00558.19 ORF106438 - 0.12 12.1 2.3 0.17 11.7 2.0 1.4 1 1 0 1 1 1 0 Vpu protein CSG2 PF16965.5 ORF106438 - 0.12 11.3 0.2 0.14 11.0 0.2 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator EIIBC-GUT_N PF03612.14 ORF106438 - 0.12 12.1 6.0 0.18 11.5 6.0 1.2 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus TMEM171 PF15471.6 ORF106438 - 0.14 11.1 0.9 0.18 10.8 0.1 1.5 1 1 1 2 2 2 0 Transmembrane protein family 171 TFB6 PF17110.5 ORF106438 - 0.27 11.0 5.9 0.35 10.6 5.9 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH MAS20 PF02064.15 ORF106438 - 0.35 11.0 6.1 0.51 10.4 6.1 1.2 1 0 0 1 1 1 0 MAS20 protein import receptor DUF2681 PF10883.8 ORF106438 - 0.46 10.9 9.8 1.1 9.7 9.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2681) NARP1 PF12569.8 ORF106438 - 4 6.2 12.0 4.5 6.1 12.0 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Pox_Ag35 PF03286.14 ORF106438 - 5.9 6.6 13.9 7.7 6.3 13.9 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein SHR3_chaperone PF08229.11 ORF106438 - 6.5 5.7 9.1 20 4.1 8.8 1.9 1 1 0 1 1 1 0 ER membrane protein SH3 HEPN_MAE_28990 PF18737.1 ORF106284 - 0.011 15.7 2.6 0.029 14.3 2.6 1.6 1 1 0 1 1 1 0 MAE_28990/MAE_18760-like HEPN Gmx_para_CXXCG PF09535.10 ORF106284 - 0.036 13.3 0.0 0.045 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) ODR4-like PF14778.6 ORF105744 - 0.014 14.3 0.2 0.016 14.2 0.2 1.0 1 0 0 1 1 1 0 Olfactory receptor 4-like TALPID3 PF15324.6 ORF105022 - 0.036 11.8 0.6 0.04 11.6 0.6 1.0 1 0 0 1 1 1 0 Hedgehog signalling target NUDE_C PF04880.13 ORF104626 - 0.26 11.7 2.3 0.33 11.4 2.3 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Acetyltransf_1 PF00583.25 ORF102755 - 7.9e-06 26.1 0.0 8.4e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF102755 - 0.0029 18.0 0.1 0.0039 17.6 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF102755 - 0.014 15.3 0.1 0.021 14.7 0.1 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF3671 PF12420.8 ORF101948 - 0.00065 19.8 0.0 0.0011 19.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF2207 PF09972.9 ORF101948 - 0.00085 18.2 0.0 0.001 18.0 0.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) TMEM154 PF15102.6 ORF101948 - 0.0049 16.8 0.2 0.0066 16.4 0.1 1.4 1 1 0 1 1 1 1 TMEM154 protein family DUF3899 PF13038.6 ORF101948 - 0.007 16.8 0.0 0.012 16.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3899) DUF2140 PF09911.9 ORF101948 - 0.0091 15.6 0.1 0.014 15.0 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2140) SIT PF15330.6 ORF101948 - 0.013 15.9 0.1 0.08 13.4 0.0 2.0 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT DUF5385 PF17359.2 ORF101948 - 0.015 14.9 0.1 0.022 14.3 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Tetraspanin PF00335.20 ORF101948 - 0.016 14.9 0.1 0.21 11.2 0.0 2.0 2 0 0 2 2 2 0 Tetraspanin family ATG27 PF09451.10 ORF101948 - 0.018 14.9 0.1 0.028 14.3 0.1 1.3 1 0 0 1 1 1 0 Autophagy-related protein 27 BatD PF13584.6 ORF101948 - 0.019 13.8 0.0 0.023 13.6 0.0 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF5305 PF17231.2 ORF101948 - 0.029 13.8 0.0 0.036 13.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4577 PF15145.6 ORF101948 - 0.046 13.8 0.0 0.062 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Orf78 PF06024.12 ORF101948 - 0.085 13.2 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 Orf78 (ac78) DUF2615 PF11027.8 ORF101948 - 0.14 12.3 0.0 0.33 11.1 0.0 1.6 1 1 0 2 2 2 0 Protein of unknown function (DUF2615) DUF4330 PF14221.6 ORF101948 - 0.22 11.7 0.1 0.33 11.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) DUF4834 PF16118.5 ORF101948 - 0.23 12.4 0.2 0.23 12.4 0.2 1.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) FeoB_associated PF12669.7 ORF101948 - 0.28 11.6 0.6 0.5 10.8 0.6 1.4 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Wzy_C PF04932.15 ORF101948 - 0.34 10.5 2.8 0.49 10.0 2.8 1.2 1 0 0 1 1 1 0 O-Antigen ligase Slp PF03843.13 ORF101523 - 0.094 12.1 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein Slp family CReP_N PF10472.9 ORF101394 - 0.019 13.8 0.9 0.024 13.5 0.9 1.1 1 0 0 1 1 1 0 eIF2-alpha phosphatase phosphorylation constitutive repressor DUF4698 PF15769.5 NODE_47302_length_406_cov_1.706199_g39459_i0reverse_frame_1 - 0.0054 15.8 6.1 0.0062 15.7 6.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4698) Terpene_synth_C PF03936.16 NODE_47295_length_406_cov_2.204852_g39452_i0reverse_frame_1 - 0.08 12.3 0.3 0.096 12.0 0.3 1.1 1 0 0 1 1 1 0 Terpene synthase family, metal binding domain DUF2070 PF09843.9 NODE_47295_length_406_cov_2.204852_g39452_i0forward_frame_1 - 1.7 6.8 4.5 1.8 6.8 4.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Ank_4 PF13637.6 NODE_47294_length_406_cov_2.226415_g39451_i0forward_frame_1 - 0.0069 16.9 0.2 0.017 15.7 0.2 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) TPM_phosphatase PF04536.14 NODE_47291_length_406_cov_2.512129_g39448_i0reverse_frame_1 - 3.2e-17 62.8 0.3 4.2e-17 62.5 0.3 1.2 1 0 0 1 1 1 1 TPM domain MOLO1 PF17175.4 NODE_47291_length_406_cov_2.512129_g39448_i0reverse_frame_1 - 0.0028 17.8 0.2 0.0097 16.0 0.2 1.8 1 1 0 1 1 1 1 Modulator of levamisole receptor-1 CCB2_CCB4 PF11152.8 NODE_47291_length_406_cov_2.512129_g39448_i0reverse_frame_1 - 0.084 12.2 0.3 0.13 11.6 0.2 1.4 1 1 0 1 1 1 0 Cofactor assembly of complex C subunit B, CCB2/CCB4 ENOD40 PF08247.11 NODE_47290_length_406_cov_2.517520_g39447_i0forward_frame_1 - 0.096 12.7 1.3 0.21 11.6 1.3 1.6 1 0 0 1 1 1 0 ENOD40 protein DUF1899 PF08953.11 NODE_47287_length_406_cov_2.778976_g39444_i0reverse_frame_1 - 0.008 16.0 0.4 0.012 15.5 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1899) ANAPC4_WD40 PF12894.7 NODE_47274_length_406_cov_58.272237_g39431_i0forward_frame_1 - 4.2e-05 23.8 0.0 0.041 14.2 0.0 2.2 2 0 0 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 NODE_47274_length_406_cov_58.272237_g39431_i0forward_frame_1 - 0.0016 17.5 0.1 0.011 14.7 0.0 2.0 1 1 1 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40 PF00400.32 NODE_47274_length_406_cov_58.272237_g39431_i0forward_frame_1 - 0.013 16.4 0.0 0.2 12.6 0.0 2.1 2 0 0 2 2 2 0 WD domain, G-beta repeat DUF2065 PF09838.9 NODE_47271_length_406_cov_68.509434_g39428_i0forward_frame_1 - 0.055 13.5 0.4 0.099 12.7 0.1 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) Perm-CXXC PF15629.6 NODE_47254_length_406_cov_110.285714_g39412_i0forward_frame_1 - 0.057 13.7 3.1 0.16 12.3 3.1 1.7 1 0 0 1 1 1 0 Permuted single zf-CXXC unit CDH1_2_SANT_HL1 PF18375.1 NODE_47254_length_406_cov_110.285714_g39412_i0forward_frame_1 - 0.081 13.6 0.1 0.13 13.0 0.1 1.3 1 0 0 1 1 1 0 CDH1/2 SANT-Helical linker 1 OstA_2 PF13100.6 NODE_47253_length_406_cov_110.908356_g39411_i0forward_frame_1 - 0.1 12.2 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 OstA-like protein YwiC PF14256.6 NODE_47244_length_406_cov_174.495957_g39403_i0forward_frame_1 - 0.076 13.3 0.8 0.12 12.7 0.8 1.3 1 0 0 1 1 1 0 YwiC-like protein ABC_tran PF00005.27 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 1.1e-13 51.8 0.0 1.6e-13 51.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 5.3e-05 23.2 0.0 6.5e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.0024 17.6 0.0 0.0039 16.9 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.0045 17.4 0.0 0.007 16.8 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.0096 15.9 0.0 0.013 15.5 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_28 PF13521.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.0098 16.2 0.1 0.014 15.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.018 15.3 0.1 0.033 14.5 0.1 1.3 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.024 14.3 0.0 0.03 14.0 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_23 PF13476.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.034 14.6 0.0 0.044 14.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.058 13.2 0.0 0.078 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system NACHT PF05729.12 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.068 13.1 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.072 13.1 0.0 0.46 10.5 0.1 1.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) G-alpha PF00503.20 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.077 12.1 0.0 0.083 12.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_25 PF13481.6 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.097 12.2 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.1 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase Viral_helicase1 PF01443.18 NODE_47226_length_407_cov_1.760753_g39388_i0reverse_frame_1 - 0.12 12.1 0.1 0.21 11.3 0.1 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase UCH PF00443.29 NODE_47225_length_407_cov_1.803763_g39387_i0reverse_frame_1 - 0.1 12.1 1.6 1.2 8.6 0.4 2.1 1 1 1 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase DUF1902 PF08972.11 NODE_47209_length_407_cov_2.771505_g39371_i0forward_frame_1 - 0.12 12.4 0.1 0.27 11.2 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1902) K1 PF02960.14 NODE_47208_length_407_cov_2.876344_g39370_i0forward_frame_1 - 2 8.5 8.2 4.8 7.3 6.9 2.1 1 1 0 1 1 1 0 K1 glycoprotein ERGIC_N PF13850.6 NODE_47183_length_407_cov_80.677419_g2179_i1reverse_frame_1 - 0.083 13.2 0.1 0.12 12.7 0.1 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) fn2 PF00040.19 NODE_47156_length_407_cov_683.712366_g39319_i0forward_frame_1 - 0.23 11.8 1.6 0.4 11.0 1.6 1.4 1 0 0 1 1 1 0 Fibronectin type II domain MFS_1 PF07690.16 NODE_47149_length_408_cov_1.756032_g39314_i0forward_frame_1 - 0.00045 19.3 15.8 0.00052 19.0 15.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Nodulin-like PF06813.13 NODE_47149_length_408_cov_1.756032_g39314_i0forward_frame_1 - 0.0019 17.7 1.6 0.0026 17.3 1.6 1.1 1 0 0 1 1 1 1 Nodulin-like Mito_carr PF00153.27 NODE_47145_length_408_cov_2.128686_g39310_i0reverse_frame_1 - 9.2e-06 25.5 0.0 0.0053 16.6 0.0 2.2 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF3551 PF12071.8 NODE_47144_length_408_cov_2.187668_g39309_i0forward_frame_1 - 0.19 11.8 4.0 0.46 10.6 4.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3551) DUF16 PF01519.16 NODE_47141_length_408_cov_2.329759_g39306_i0forward_frame_1 - 8.4e-05 23.0 3.5 0.0021 18.5 2.5 2.1 1 1 1 2 2 2 2 Protein of unknown function DUF16 THOC7 PF05615.13 NODE_47141_length_408_cov_2.329759_g39306_i0forward_frame_1 - 0.26 11.6 2.6 0.35 11.1 0.4 2.1 2 1 0 2 2 2 0 Tho complex subunit 7 SlyX PF04102.12 NODE_47141_length_408_cov_2.329759_g39306_i0forward_frame_1 - 0.32 11.6 1.9 2.8 8.6 0.2 2.2 2 0 0 2 2 2 0 SlyX Phospholamban PF04272.14 NODE_47140_length_408_cov_2.402145_g39305_i0forward_frame_1 - 0.36 10.3 4.5 5.2 6.6 0.3 2.4 2 0 0 2 2 2 0 Phospholamban DUF3950 PF13132.6 NODE_47139_length_408_cov_2.493298_g39304_i0forward_frame_1 - 0.14 12.0 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) DUF365 PF04033.12 NODE_47131_length_408_cov_5.788204_g39296_i0reverse_frame_1 - 0.08 13.2 0.1 0.94 9.8 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF365) Cdc13_OB2 PF18691.1 NODE_47129_length_408_cov_33.962466_g39294_i0reverse_frame_1 - 0.082 13.0 0.2 0.12 12.4 0.2 1.2 1 0 0 1 1 1 0 Cell division control protein 13, OB2 domain Yae1_N PF09811.9 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_1 - 0.00012 21.7 23.5 0.07 12.9 3.5 4.3 2 1 1 3 3 3 3 Essential protein Yae1, N terminal Tnp_zf-ribbon_2 PF13842.6 NODE_47103_length_408_cov_118.546917_g39268_i0reverse_frame_1 - 1.5 9.7 6.7 15 6.5 0.1 2.9 3 0 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon DUF4658 PF15555.6 NODE_47103_length_408_cov_118.546917_g39268_i0reverse_frame_1 - 9.9 6.3 7.6 29 4.8 2.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4658) MMM1 PF10296.9 NODE_47094_length_408_cov_138.013405_g39259_i0reverse_frame_1 - 0.15 11.1 0.1 0.18 10.8 0.1 1.1 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 DUF3136 PF11334.8 NODE_47093_length_408_cov_146.769437_g39258_i0reverse_frame_1 - 0.088 12.6 2.9 0.2 11.5 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3136) Pkinase PF00069.25 NODE_47092_length_408_cov_151.029491_g39257_i0forward_frame_1 - 6.5e-07 29.0 0.0 1e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain RCDG1 PF15725.5 NODE_47087_length_408_cov_205.986595_g39252_i0forward_frame_1 - 0.037 14.4 0.9 0.059 13.8 0.9 1.3 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein InPase PF18823.1 NODE_47083_length_408_cov_254.892761_g39248_i0forward_frame_1 - 0.23 11.1 0.1 0.3 10.8 0.1 1.1 1 0 0 1 1 1 0 Inorganic Pyrophosphatase IL12p40_C PF10420.9 NODE_47073_length_408_cov_1772.174263_g39238_i0forward_frame_1 - 0.035 14.6 1.0 0.07 13.6 1.0 1.4 1 0 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus PAN_4 PF14295.6 NODE_47070_length_408_cov_31342.241287_g39235_i0forward_frame_1 - 0.015 15.2 4.0 0.034 14.0 4.0 1.6 1 0 0 1 1 1 0 PAN domain DUF4709 PF15821.5 NODE_47064_length_409_cov_1.772727_g39229_i0reverse_frame_3 - 0.13 12.6 3.4 0.19 12.0 3.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4709) YmcE_antitoxin PF15939.5 NODE_47064_length_409_cov_1.772727_g39229_i0forward_frame_2 - 0.21 11.8 4.6 0.3 11.3 1.1 2.3 1 1 1 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system SH PF01445.17 NODE_47063_length_409_cov_2.018717_g39228_i0reverse_frame_2 - 0.16 12.0 0.2 0.16 12.0 0.2 1.8 2 0 0 2 2 2 0 Viral small hydrophobic protein Nudix_N_2 PF14803.6 NODE_47060_length_409_cov_2.114973_g39225_i0forward_frame_2 - 2 8.4 5.7 1.8 8.5 2.5 2.8 2 1 0 2 2 2 0 Nudix N-terminal DUF2551 PF10826.8 NODE_47059_length_409_cov_2.211230_g39224_i0reverse_frame_2 - 0.019 15.2 0.0 0.028 14.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2551) Memo PF01875.17 NODE_47059_length_409_cov_2.211230_g39224_i0reverse_frame_2 - 0.07 12.3 0.4 0.082 12.0 0.4 1.0 1 0 0 1 1 1 0 Memo-like protein PTP2 PF17022.5 NODE_47053_length_409_cov_2.409091_g39218_i0forward_frame_3 - 0.034 13.7 0.6 0.051 13.2 0.6 1.2 1 0 0 1 1 1 0 Polar tube protein 2 from Microsporidia DUF3267 PF11667.8 NODE_47053_length_409_cov_2.409091_g39218_i0forward_frame_3 - 0.37 11.1 5.4 0.18 12.1 3.3 1.6 2 0 0 2 2 2 0 Putative zincin peptidase Glyco_hydro_77 PF02446.17 NODE_47048_length_409_cov_3.203209_g39213_i0reverse_frame_2 - 4.2e-17 62.2 0.0 4.6e-17 62.0 0.0 1.0 1 0 0 1 1 1 1 4-alpha-glucanotransferase cNMP_binding PF00027.29 NODE_47046_length_409_cov_3.425134_g39211_i0forward_frame_3 - 1.1e-06 28.6 0.0 1.8e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Glyco_trans_2_3 PF13632.6 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_2 - 0.045 13.7 0.1 0.05 13.5 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase family group 2 Slx4 PF09494.10 NODE_47045_length_409_cov_3.475936_g39210_i0reverse_frame_2 - 0.2 11.6 2.4 4.6 7.3 0.4 2.2 2 0 0 2 2 2 0 Slx4 endonuclease Unpaired PF15972.5 NODE_47045_length_409_cov_3.475936_g39210_i0forward_frame_3 - 0.11 12.0 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Unpaired protein RCC1_2 PF13540.6 NODE_47034_length_409_cov_62.050802_g39199_i0reverse_frame_2 - 8.8e-10 38.1 0.0 0.17 11.8 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Spidroin_N PF16763.5 NODE_47034_length_409_cov_62.050802_g39199_i0reverse_frame_2 - 0.0053 16.8 0.1 6.9 6.7 0.0 2.9 1 1 2 3 3 3 3 Major ampullate spidroin 1, spider silk protein 1, N-term UL97 PF06734.12 NODE_47034_length_409_cov_62.050802_g39199_i0reverse_frame_2 - 0.18 11.7 0.0 2 8.3 0.0 2.3 1 1 2 3 3 3 0 UL97 PKD PF00801.20 NODE_47034_length_409_cov_62.050802_g39199_i0reverse_frame_2 - 0.26 11.2 5.1 15 5.6 0.1 3.1 2 1 1 3 3 3 0 PKD domain HCV_NS5a PF01506.19 NODE_47033_length_409_cov_62.566845_g39198_i0forward_frame_2 - 0.058 13.3 1.0 0.15 12.0 1.0 1.7 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a protein membrane anchor SF3A3 PF16837.5 NODE_47030_length_409_cov_66.604278_g39196_i0forward_frame_2 - 0.061 13.8 1.9 0.11 13.0 1.9 1.5 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 Bac_export_2 PF01312.19 NODE_47029_length_409_cov_67.262032_g39195_i0forward_frame_2 - 1.8 7.7 5.4 2 7.6 5.4 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family DUF3556 PF12077.8 NODE_47023_length_409_cov_110.962567_g39189_i0forward_frame_2 - 0.16 10.4 0.0 0.18 10.2 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein of unknown function (DUF3556) DUF446 PF04287.12 NODE_47022_length_409_cov_113.219251_g39188_i0reverse_frame_2 - 0.08 13.0 0.3 0.13 12.3 0.3 1.4 1 0 0 1 1 1 0 tRNA pseudouridine synthase C FCP1_C PF09309.10 NODE_47010_length_409_cov_255.061497_g39176_i0reverse_frame_2 - 0.0015 18.5 1.3 0.0015 18.5 1.3 1.5 2 0 0 2 2 2 1 FCP1, C-terminal Rad50_zn_hook PF04423.14 NODE_47004_length_409_cov_1063.639037_g39171_i0reverse_frame_3 - 0.019 14.8 0.1 0.028 14.2 0.1 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif Prok-RING_4 PF14447.6 NODE_47004_length_409_cov_1063.639037_g39171_i0reverse_frame_3 - 0.54 10.2 9.5 3 7.8 9.5 2.3 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 NODE_47004_length_409_cov_1063.639037_g39171_i0reverse_frame_3 - 0.68 10.0 8.8 1.5 8.9 1.2 2.8 2 1 0 2 2 2 0 RING-type zinc-finger zf-C3HC4_3 PF13920.6 NODE_47004_length_409_cov_1063.639037_g39171_i0reverse_frame_3 - 1.4 8.8 10.6 5.1 7.0 10.6 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_47004_length_409_cov_1063.639037_g39171_i0reverse_frame_3 - 2.5 8.1 12.7 9.9 6.2 12.7 2.1 1 1 0 1 1 1 0 zinc-RING finger domain Aldedh PF00171.22 NODE_47004_length_409_cov_1063.639037_g39171_i0reverse_frame_2 - 1.5e-07 30.3 1.9 0.00021 19.9 0.4 2.0 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF1487 PF07368.11 NODE_47004_length_409_cov_1063.639037_g39171_i0reverse_frame_2 - 0.03 13.8 0.4 0.22 10.9 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1487) DUF3149 PF11346.8 NODE_46998_length_410_cov_1.346667_g39166_i0forward_frame_3 - 0.58 9.8 4.7 1.2 8.8 0.8 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) BRCT PF00533.26 NODE_46997_length_410_cov_1.589333_g39165_i0reverse_frame_3 - 0.0041 17.5 0.2 0.016 15.5 0.1 1.9 1 1 1 2 2 2 1 BRCA1 C Terminus (BRCT) domain Na_H_Exchanger PF00999.21 NODE_46991_length_410_cov_2.352000_g39159_i0reverse_frame_2 - 1.9e-13 50.0 2.8 2.2e-13 49.8 2.8 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF3082 PF11282.8 NODE_46991_length_410_cov_2.352000_g39159_i0reverse_frame_2 - 0.18 12.0 3.6 0.17 12.1 1.5 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3082) RCC1 PF00415.18 NODE_46990_length_410_cov_2.576000_g39158_i0reverse_frame_2 - 1.1e-15 58.0 0.6 1.4e-10 41.6 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_46990_length_410_cov_2.576000_g39158_i0reverse_frame_2 - 5.1e-09 35.7 0.1 5.1e-09 35.7 0.1 2.0 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat Kinesin PF00225.23 NODE_46987_length_410_cov_3.200000_g39155_i0forward_frame_3 - 4.4e-39 134.3 0.1 5.4e-39 134.0 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_46987_length_410_cov_3.200000_g39155_i0forward_frame_3 - 4e-24 85.2 0.0 5.2e-24 84.9 0.0 1.1 1 0 0 1 1 1 1 Microtubule binding Bac_DnaA PF00308.18 NODE_46987_length_410_cov_3.200000_g39155_i0forward_frame_3 - 0.043 13.7 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_22 PF13401.6 NODE_46987_length_410_cov_3.200000_g39155_i0forward_frame_3 - 0.15 12.3 0.1 0.21 11.9 0.1 1.3 1 1 0 1 1 1 0 AAA domain FUSC-like PF12805.7 NODE_46985_length_410_cov_3.536000_g39153_i0reverse_frame_2 - 1.9e-35 122.3 8.8 2.1e-35 122.2 8.8 1.0 1 0 0 1 1 1 1 FUSC-like inner membrane protein yccS Ribosomal_L35p PF01632.19 NODE_46983_length_410_cov_3.861333_g39151_i0forward_frame_3 - 1.6e-19 70.1 13.2 2.2e-19 69.7 13.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L35 IF3_C PF00707.22 NODE_46983_length_410_cov_3.861333_g39151_i0forward_frame_3 - 1.6e-13 50.4 0.3 1.6e-13 50.4 0.3 1.6 2 0 0 2 2 2 1 Translation initiation factor IF-3, C-terminal domain CSRNP_N PF16019.5 NODE_46980_length_410_cov_6.122667_g39148_i0reverse_frame_3 - 0.046 13.6 1.0 0.065 13.1 1.0 1.2 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus IBB PF01749.20 NODE_46980_length_410_cov_6.122667_g39148_i0reverse_frame_2 - 0.056 13.9 2.2 0.094 13.2 2.2 1.5 1 0 0 1 1 1 0 Importin beta binding domain Vir_act_alpha_C PF10400.9 NODE_46980_length_410_cov_6.122667_g39148_i0reverse_frame_2 - 0.056 14.1 5.2 0.49 11.1 0.8 2.2 1 1 1 2 2 2 0 Virulence activator alpha C-term Pinin_SDK_memA PF04696.13 NODE_46980_length_410_cov_6.122667_g39148_i0reverse_frame_2 - 0.2 11.7 11.0 0.43 10.6 11.0 1.6 1 1 0 1 1 1 0 pinin/SDK/memA/ protein conserved region Keratin_B2_2 PF13885.6 NODE_46980_length_410_cov_6.122667_g39148_i0forward_frame_3 - 3.9 7.5 18.6 6.2 6.9 11.8 2.4 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein DUF4131 PF13567.6 NODE_46979_length_410_cov_12.194667_g39147_i0reverse_frame_3 - 6.3 6.4 14.0 10 5.8 14.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Mito_fiss_reg PF05308.11 NODE_46979_length_410_cov_12.194667_g39147_i0reverse_frame_2 - 9.1 6.3 9.8 13 5.8 1.5 2.1 2 0 0 2 2 2 0 Mitochondrial fission regulator DUF21 PF01595.20 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_3 - 0.1 12.3 1.3 0.13 12.0 1.3 1.1 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain Shisa PF13908.6 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.0017 18.6 2.3 0.0021 18.3 2.3 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF2371 PF10177.9 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.0076 16.4 0.9 0.012 15.8 0.9 1.5 1 1 0 1 1 1 1 Uncharacterised conserved protein (DUF2371) Apt1 PF10351.9 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.011 14.6 1.6 0.011 14.7 1.6 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain SID-1_RNA_chan PF13965.6 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.013 13.9 0.5 0.014 13.9 0.5 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF4834 PF16118.5 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.015 16.3 0.1 0.02 15.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Ctr PF04145.15 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.015 15.9 0.6 0.018 15.6 0.6 1.1 1 0 0 1 1 1 0 Ctr copper transporter family FAM176 PF14851.6 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.03 14.0 0.3 0.037 13.7 0.3 1.2 1 0 0 1 1 1 0 FAM176 family Trp_oprn_chp PF09534.10 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.033 14.0 0.3 0.043 13.6 0.3 1.3 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Eapp_C PF10238.9 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.053 13.6 0.2 0.068 13.2 0.2 1.1 1 0 0 1 1 1 0 E2F-associated phosphoprotein RSB_motif PF16294.5 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.096 13.0 6.7 0.12 12.7 6.7 1.2 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif Baculo_11_kDa PF06143.11 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.21 11.2 2.5 0.32 10.6 2.5 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family NPR3 PF03666.13 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.22 10.3 3.3 0.24 10.2 3.3 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 HemY_N PF07219.13 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.27 11.4 1.0 0.47 10.7 1.0 1.4 1 0 0 1 1 1 0 HemY protein N-terminus AF-4 PF05110.13 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.45 8.6 16.4 0.54 8.3 16.4 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein Corona_nucleoca PF00937.18 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.53 9.3 18.0 0.72 8.8 18.0 1.2 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Lin-8 PF03353.15 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 0.59 9.7 3.7 0.75 9.3 3.7 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist EphA2_TM PF14575.6 NODE_46979_length_410_cov_12.194667_g39147_i0forward_frame_2 - 1.2 10.0 7.0 2.9 8.8 7.0 1.8 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain NPCC PF08058.11 NODE_46978_length_410_cov_48.738667_g39146_i0reverse_frame_3 - 0.16 12.0 0.0 0.24 11.4 0.0 1.3 1 1 0 1 1 1 0 Nuclear pore complex component IQ PF00612.27 NODE_46978_length_410_cov_48.738667_g39146_i0forward_frame_3 - 3.7e-06 26.3 3.6 0.00014 21.4 2.9 4.0 3 1 1 4 4 4 2 IQ calmodulin-binding motif Tmemb_9 PF05434.11 NODE_46975_length_410_cov_58.994667_g39143_i0reverse_frame_2 - 0.0006 19.7 1.0 0.00077 19.4 1.0 1.1 1 0 0 1 1 1 1 TMEM9 PPK2 PF03976.14 NODE_46970_length_410_cov_73.469333_g39139_i0reverse_frame_2 - 0.052 13.0 0.0 0.073 12.6 0.0 1.2 1 0 0 1 1 1 0 Polyphosphate kinase 2 (PPK2) Creb_binding PF09030.10 NODE_46970_length_410_cov_73.469333_g39139_i0reverse_frame_2 - 0.088 13.5 0.0 0.18 12.5 0.0 1.4 1 0 0 1 1 1 0 Creb binding Nefa_Nip30_N PF10187.9 NODE_46970_length_410_cov_73.469333_g39139_i0forward_frame_3 - 0.15 12.4 0.1 0.21 11.9 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 MRC1 PF09444.10 NODE_46967_length_410_cov_76.437333_g39136_i0forward_frame_3 - 0.031 14.8 3.7 0.042 14.4 3.7 1.2 1 0 0 1 1 1 0 MRC1-like domain XRCC4 PF06632.12 NODE_46967_length_410_cov_76.437333_g39136_i0forward_frame_3 - 0.16 10.8 4.7 0.2 10.5 4.7 1.2 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 Rrn6 PF10214.9 NODE_46967_length_410_cov_76.437333_g39136_i0forward_frame_3 - 3.3 6.1 12.2 3.7 5.9 12.2 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor VEGFR-2_TMD PF17988.1 NODE_46960_length_410_cov_87.010667_g39129_i0forward_frame_3 - 0.37 10.3 3.0 0.85 9.1 3.0 1.5 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain DUF630 PF04783.12 NODE_46954_length_410_cov_117.512000_g39057_i1reverse_frame_3 - 0.069 13.3 0.6 0.11 12.6 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF630) MyTH4 PF00784.17 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_3 - 0.0044 17.5 5.4 4.5 7.8 0.1 3.1 1 1 2 3 3 3 3 MyTH4 domain UPF0444 PF15475.6 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_2 - 0.064 13.5 1.7 0.13 12.5 0.2 2.1 1 1 1 2 2 2 0 Transmembrane protein C12orf23, UPF0444 DUF2840 PF11000.8 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_2 - 0.16 11.7 0.0 6.8 6.5 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2840) Tuberculin PF12198.8 NODE_46950_length_410_cov_164.816000_g39121_i0reverse_frame_2 - 0.28 11.3 3.1 8.4 6.6 0.1 3.1 3 0 0 3 3 3 0 Theoretical tuberculin protein BRCT_3 PF18428.1 NODE_46950_length_410_cov_164.816000_g39121_i0forward_frame_3 - 0.14 12.2 0.1 2.3 8.3 0.1 2.5 1 1 2 3 3 3 0 BRCA1 C Terminus (BRCT) domain Stc1 PF12898.7 NODE_46950_length_410_cov_164.816000_g39121_i0forward_frame_3 - 0.39 11.3 7.8 14 6.3 2.7 3.0 2 1 0 2 2 2 0 Stc1 domain RCC1_2 PF13540.6 NODE_46950_length_410_cov_164.816000_g39121_i0forward_frame_2 - 8.5e-07 28.6 3.7 0.053 13.3 0.1 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_46950_length_410_cov_164.816000_g39121_i0forward_frame_2 - 0.0099 16.0 0.1 27 4.8 0.0 3.0 2 1 1 3 3 3 3 Uncharacterised ACR, YagE family COG1723 HTH_9 PF08221.11 NODE_46932_length_411_cov_1.271277_g39105_i0reverse_frame_3 - 0.072 13.2 0.3 0.13 12.4 0.3 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks190.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks190.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks190.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks190.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4129 PF13559.6 NODE_46929_length_411_cov_1.686170_g39102_i0reverse_frame_3 - 0.14 12.5 0.3 0.14 12.5 0.3 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4129) PAZ_siRNAbind PF12212.8 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.0062 16.4 0.1 0.017 15.0 0.1 1.8 1 1 0 2 2 2 1 PAZ domain DUF3600 PF12207.8 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.034 14.1 0.3 0.053 13.5 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3600) His_Phos_2 PF00328.22 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.04 13.3 0.3 0.042 13.2 0.3 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) Ribonuc_2-5A PF06479.12 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.046 13.9 0.1 0.075 13.2 0.1 1.3 1 0 0 1 1 1 0 Ribonuclease 2-5A LPP PF04728.13 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.1 13.0 2.2 1.5 9.3 0.1 2.8 3 0 0 3 3 3 0 Lipoprotein leucine-zipper WXG100 PF06013.12 NODE_46927_length_411_cov_2.069149_g39100_i0reverse_frame_2 - 0.22 11.8 1.8 14 6.0 0.0 2.8 3 0 0 3 3 3 0 Proteins of 100 residues with WXG Sgf11_N PF18519.1 NODE_46927_length_411_cov_2.069149_g39100_i0forward_frame_3 - 0.48 10.0 4.8 0.19 11.3 1.3 2.1 2 0 0 2 2 2 0 SAGA-associated factor 11 N-terminal domain Sigma70_r1_1 PF03979.14 NODE_46925_length_411_cov_2.111702_g39098_i0reverse_frame_2 - 0.039 14.0 0.5 0.039 14.0 0.5 1.9 1 1 1 2 2 2 0 Sigma-70 factor, region 1.1 VIT PF08487.10 NODE_46925_length_411_cov_2.111702_g39098_i0reverse_frame_2 - 0.25 11.6 2.1 0.29 11.3 1.1 1.6 2 0 0 2 2 2 0 Vault protein inter-alpha-trypsin domain Musclin PF11037.8 NODE_46923_length_411_cov_2.180851_g39096_i0reverse_frame_3 - 0.058 13.3 0.0 0.076 12.9 0.0 1.1 1 0 0 1 1 1 0 Insulin-resistance promoting peptide in skeletal muscle Tail_VII PF17091.5 NODE_46923_length_411_cov_2.180851_g39096_i0forward_frame_2 - 0.072 13.0 0.4 0.072 13.0 0.4 1.7 2 0 0 2 2 2 0 Inovirus G7P protein Herpes_UL49_5 PF05702.11 NODE_46920_length_411_cov_2.382979_g39093_i0reverse_frame_3 - 0.028 14.5 1.0 0.051 13.7 1.0 1.4 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein GAPES2 PF17156.4 NODE_46920_length_411_cov_2.382979_g39093_i0forward_frame_3 - 1.5e-40 139.2 0.8 1.8e-40 138.9 0.8 1.1 1 0 0 1 1 1 1 Gammaproteobacterial periplasmic sensor domain FtsL PF04999.13 NODE_46920_length_411_cov_2.382979_g39093_i0forward_frame_3 - 0.24 11.4 1.2 0.43 10.6 1.1 1.6 1 1 0 1 1 1 0 Cell division protein FtsL EAL PF00563.20 NODE_46920_length_411_cov_2.382979_g39093_i0forward_frame_2 - 0.12 11.9 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 EAL domain Leu_zip PF15294.6 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.0058 16.2 1.7 0.0065 16.0 1.7 1.1 1 0 0 1 1 1 1 Leucine zipper PRKG1_interact PF15898.5 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.0066 17.3 1.9 0.012 16.5 1.9 1.5 1 0 0 1 1 1 1 cGMP-dependent protein kinase interacting domain RIG-I_C PF18119.1 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.0069 16.4 1.7 0.0096 15.9 1.7 1.3 1 0 0 1 1 1 1 RIG-I receptor C-terminal domain Prominin PF05478.11 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.023 12.7 2.5 0.025 12.6 2.5 1.0 1 0 0 1 1 1 0 Prominin DUF1864 PF08933.11 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.062 12.0 0.9 0.069 11.9 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1864) Nsp1_C PF05064.13 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.086 12.6 4.7 0.11 12.3 4.7 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region Iwr1 PF08574.10 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.1 13.6 3.4 0.16 13.0 3.4 1.3 1 0 0 1 1 1 0 Transcription factor Iwr1 Exonuc_VII_L PF02601.15 NODE_46918_length_411_cov_2.585106_g39091_i0reverse_frame_3 - 0.11 12.0 1.0 0.12 11.9 1.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Cas3_C PF18395.1 NODE_46915_length_411_cov_2.792553_g39088_i0reverse_frame_2 - 0.063 13.8 1.7 0.089 13.3 0.6 1.7 1 1 1 2 2 2 0 Cas3 C-terminal domain TP53IP5 PF15331.6 NODE_46914_length_411_cov_2.867021_g39087_i0reverse_frame_2 - 0.0083 16.3 0.1 0.011 15.9 0.1 1.1 1 0 0 1 1 1 1 Cellular tumour antigen p53-inducible 5 Sugar_tr PF00083.24 NODE_46913_length_411_cov_2.914894_g39086_i0reverse_frame_3 - 0.06 12.2 3.4 0.067 12.0 3.4 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter Granulin PF00396.18 NODE_46913_length_411_cov_2.914894_g39086_i0forward_frame_2 - 0.11 12.9 2.9 0.21 11.9 1.7 1.8 2 0 0 2 2 2 0 Granulin TPP_enzyme_M PF00205.22 NODE_46911_length_411_cov_3.117021_g39084_i0forward_frame_2 - 4.4e-35 120.4 0.1 4.8e-35 120.3 0.1 1.0 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 NODE_46911_length_411_cov_3.117021_g39084_i0forward_frame_2 - 0.074 12.8 0.0 0.089 12.6 0.0 1.2 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit DUF498 PF04430.14 NODE_46911_length_411_cov_3.117021_g39084_i0forward_frame_2 - 0.097 12.7 0.0 0.19 11.8 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) DUF4231 PF14015.6 NODE_46906_length_411_cov_17.055851_g39079_i0reverse_frame_3 - 0.16 12.4 0.6 5.5 7.5 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) FKBP_C PF00254.28 NODE_46903_length_411_cov_57.747340_g39076_i0forward_frame_3 - 6.8e-27 93.6 0.0 8.9e-27 93.3 0.0 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF72 PF01904.18 NODE_46895_length_411_cov_82.609043_g39068_i0reverse_frame_2 - 7.2e-13 49.2 0.4 8.9e-13 48.9 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF72 PknG_TPR PF16918.5 NODE_46895_length_411_cov_82.609043_g39068_i0reverse_frame_2 - 0.075 11.7 0.0 0.086 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat AHJR-like PF18743.1 NODE_46894_length_411_cov_85.026596_g39067_i0reverse_frame_2 - 0.036 13.6 0.0 0.049 13.2 0.0 1.2 1 0 0 1 1 1 0 REase_AHJR-like NinF PF05810.12 NODE_46892_length_411_cov_100.901596_g39065_i0reverse_frame_2 - 5.7 6.9 7.1 1.1 9.1 0.2 2.3 2 0 0 2 2 2 0 NinF protein Trehalose_recp PF06151.13 NODE_46892_length_411_cov_100.901596_g39065_i0forward_frame_2 - 0.0025 16.5 0.8 0.0034 16.0 0.0 1.5 2 0 0 2 2 2 1 Trehalose receptor TRP PF06011.12 NODE_46880_length_411_cov_130.106383_g39053_i0forward_frame_3 - 0.0057 15.4 7.5 0.0059 15.4 7.5 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF4389 PF14333.6 NODE_46880_length_411_cov_130.106383_g39053_i0forward_frame_3 - 0.35 10.8 9.1 0.23 11.4 5.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4389) SYCP2_SLD PF18584.1 NODE_46877_length_411_cov_138.154255_g39050_i0reverse_frame_2 - 0.06 13.6 1.0 0.095 12.9 0.7 1.4 1 1 0 1 1 1 0 Synaptonemal complex 2 Spt16M-like domain MSA-2c PF12238.8 ORF99620 - 0.37 10.8 2.0 0.46 10.4 2.0 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Il2rg PF15874.5 ORF98477 - 0.0026 18.0 0.1 0.0044 17.2 0.1 1.4 1 0 0 1 1 1 1 Putative Interleukin 2 receptor, gamma chain Inhibitor_Mig-6 PF11555.8 ORF97194 - 0.046 13.8 1.8 0.071 13.2 1.8 1.6 1 1 0 1 1 1 0 EGFR receptor inhibitor Mig-6 Tom22 PF04281.13 ORF95453 - 0.022 14.5 1.2 0.029 14.1 1.2 1.2 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 Histone PF00125.24 ORF95148 - 1.8e-53 180.4 3.2 2e-53 180.2 3.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF95148 - 1.2e-05 25.9 1.9 1.5e-05 25.6 1.9 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF95148 - 0.00014 22.1 0.0 0.00023 21.5 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF95148 - 0.0003 20.9 0.1 0.00057 20.0 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF95148 - 0.0018 18.5 0.1 0.0042 17.3 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF95148 - 0.05 13.7 0.0 0.07 13.2 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Defensin_RK-1 PF17860.1 ORF95100 - 0.044 14.3 2.3 0.044 14.3 2.3 3.1 3 0 0 3 3 3 0 RK-1-like defensin Frataxin_Cyay PF01491.16 ORF93383 - 3.5e-30 104.3 0.1 4.3e-30 104.0 0.1 1.1 1 0 0 1 1 1 1 Frataxin-like domain SNF PF00209.18 ORF91009 - 0.36 9.5 0.7 0.38 9.4 0.7 1.0 1 0 0 1 1 1 0 Sodium:neurotransmitter symporter family Oxysterol_BP PF01237.18 ORF90901 - 2.9e-28 98.8 1.5 3.4e-28 98.5 1.5 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein PP1c_bdg PF10488.9 ORF90901 - 0.027 14.0 0.3 0.031 13.8 0.3 1.1 1 0 0 1 1 1 0 Phosphatase-1 catalytic subunit binding region AIF-MLS PF14962.6 ORF90790 - 1.1 9.2 4.0 0.25 11.3 1.1 1.4 2 0 0 2 2 2 0 Mitochondria Localisation Sequence PilI PF10623.9 ORF89770 - 0.13 12.4 2.8 8.1 6.7 0.1 2.6 2 0 0 2 2 2 0 Plasmid conjugative transfer protein PilI LpoB PF13036.6 ORF89698 - 0.011 15.7 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB LpoB PF13036.6 ORF89592 - 0.011 15.7 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB T7SS_ESX_EspC PF10824.8 ORF87536 - 0.034 14.6 0.6 0.054 14.0 0.6 1.4 1 1 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm DUF126 PF01989.16 ORF86071 - 0.0072 16.1 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain PRRSV_2b PF07069.11 ORF85426 - 7.5 7.1 10.2 0.9 10.1 3.9 2.4 1 1 2 3 3 3 0 Porcine reproductive and respiratory syndrome virus 2b Epsilon_antitox PF08998.11 ORF83064 - 0.028 14.7 0.3 0.041 14.2 0.3 1.4 1 1 0 1 1 1 0 Bacterial epsilon antitoxin TSGA13 PF14994.6 ORF82890 - 0.095 12.1 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Testis-specific gene 13 protein Cnn_1N PF07989.11 ORF82270 - 0.037 14.2 1.0 0.072 13.2 1.0 1.5 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 YabP PF07873.11 ORF82270 - 0.11 12.3 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 YabP family CBP PF12192.8 ORF8080 - 0.017 15.3 0.1 0.033 14.4 0.1 1.4 1 0 0 1 1 1 0 Fungal calcium binding protein DUF126 PF01989.16 ORF80049 - 0.0072 16.1 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain MAM33 PF02330.16 ORF79748 - 6.1e-18 65.6 0.2 8.3e-18 65.1 0.2 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein DUF2509 PF10713.9 ORF79570 - 0.11 12.7 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2509) Tugs PF17840.1 ORF79101 - 0.07 13.3 0.6 0.33 11.2 0.2 2.2 2 1 0 2 2 2 0 Tethering Ubl4a to BAGS domain 7TM-7TMR_HD PF07698.11 ORF78853 - 0.22 11.3 8.8 0.25 11.1 2.2 2.0 1 1 1 2 2 2 0 7TM receptor with intracellular HD hydrolase Bac_RepA_C PF18008.1 ORF75783 - 0.015 15.7 1.5 1.2 9.5 0.2 2.2 2 0 0 2 2 2 0 Replication initiator protein A C-terminal domain Asp-B-Hydro_N PF05279.11 ORF75640 - 3.7 7.6 15.8 4.4 7.3 15.8 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Exostosin PF03016.15 ORF75420 - 9.7e-09 34.9 0.0 1.5e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Exostosin family Spo0A_C PF08769.11 ORF75420 - 0.038 14.1 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Sporulation initiation factor Spo0A C terminal R-HINP1I PF11463.8 ORF75420 - 0.06 12.8 0.0 0.07 12.6 0.0 1.1 1 0 0 1 1 1 0 R.HinP1I restriction endonuclease MFS_1 PF07690.16 ORF75200 - 3.6e-09 36.0 2.9 3.9e-09 35.9 2.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PK_C PF02887.16 ORF74544 - 4.5e-10 39.8 0.0 5.7e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain CpeT PF06206.11 ORF7432 - 0.12 12.3 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 CpeT/CpcT family (DUF1001) Methylase_S PF01420.19 ORF7191 - 0.024 14.8 2.3 0.031 14.5 2.3 1.1 1 0 0 1 1 1 0 Type I restriction modification DNA specificity domain Erythrovirus_X PF06795.11 ORF7191 - 0.27 11.6 2.6 0.38 11.1 0.3 2.1 2 0 0 2 2 2 0 Erythrovirus X protein Cellulose_synt PF03552.14 ORF71806 - 0.11 11.0 4.5 0.12 10.8 4.5 1.1 1 0 0 1 1 1 0 Cellulose synthase Tau95_N PF17682.1 ORF71806 - 0.44 10.8 8.1 0.72 10.0 8.1 1.5 1 1 0 1 1 1 0 Tau95 Triple barrel domain Presenilin PF01080.17 ORF71806 - 3.4 6.3 9.8 4 6.1 9.8 1.0 1 0 0 1 1 1 0 Presenilin CCSMST1 PF15013.6 ORF69391 - 0.34 11.1 1.3 1.2 9.4 0.1 2.4 2 1 1 3 3 3 0 CCSMST1 family Histone PF00125.24 ORF6591 - 1.8e-53 180.4 3.2 2e-53 180.2 3.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF6591 - 1.2e-05 25.9 1.9 1.5e-05 25.6 1.9 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF6591 - 0.00014 22.1 0.0 0.00023 21.5 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF6591 - 0.0003 20.9 0.1 0.00057 20.0 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF6591 - 0.0018 18.5 0.1 0.0042 17.3 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF6591 - 0.05 13.7 0.0 0.07 13.2 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Antistasin PF02822.14 ORF65231 - 0.67 10.6 7.2 0.21 12.2 2.4 2.6 2 1 0 2 2 2 0 Antistasin family CX9C PF16860.5 ORF64371 - 0.014 15.4 1.0 0.014 15.4 1.0 1.6 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, FGAR-AT_linker PF18072.1 ORF64371 - 0.041 14.4 0.0 0.19 12.3 0.0 2.1 2 0 0 2 2 2 0 Formylglycinamide ribonucleotide amidotransferase linker domain Cmc1 PF08583.10 ORF64371 - 0.048 13.7 2.2 0.15 12.1 0.5 2.2 1 1 1 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like VirE2 PF07229.12 ORF64371 - 0.12 11.0 0.0 0.15 10.7 0.0 1.1 1 0 0 1 1 1 0 VirE2 CBM65_1 PF18259.1 ORF63899 - 0.048 13.8 0.1 0.063 13.4 0.1 1.1 1 0 0 1 1 1 0 Carbohydrate binding module 65 domain 1 DUF126 PF01989.16 ORF61933 - 0.0072 16.1 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain zf-LITAF-like PF10601.9 ORF60406 - 0.00016 21.9 0.8 0.00024 21.3 0.8 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF3484 PF11983.8 ORF60406 - 0.95 10.6 6.7 2.4 9.3 6.7 1.8 1 1 0 1 1 1 0 Membrane-attachment and polymerisation-promoting switch DUF2076 PF09849.9 ORF60406 - 6.5 6.7 8.2 8.3 6.4 8.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Oxidored-like PF09791.9 ORF58496 - 1e-11 44.3 4.6 2.1e-11 43.3 4.6 1.4 1 0 0 1 1 1 1 Oxidoreductase-like protein, N-terminal Na_trans_assoc PF06512.13 ORF58496 - 0.014 15.7 6.8 0.016 15.5 6.8 1.1 1 0 0 1 1 1 0 Sodium ion transport-associated Conotoxin PF02950.17 ORF58496 - 0.35 11.9 2.3 0.61 11.1 2.3 1.4 1 0 0 1 1 1 0 Conotoxin DKNYY PF13644.6 ORF57768 - 0.013 16.3 1.9 0.016 16.0 1.9 1.3 1 1 0 1 1 1 0 DKNYY family Herpes_U34 PF04541.13 ORF56793 - 0.02 14.1 1.6 0.024 13.9 1.2 1.5 1 1 1 2 2 2 0 Herpesvirus virion protein U34 TMEM71 PF15121.6 ORF56793 - 0.12 12.1 1.7 0.14 11.8 1.7 1.2 1 0 0 1 1 1 0 TMEM71 protein family DUF5463 PF17551.2 ORF55898 - 1.1 9.3 6.1 3.8 7.5 6.1 2.1 1 1 0 1 1 1 0 Family of unknown function (DUF5463) DUF126 PF01989.16 ORF55840 - 0.0072 16.1 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain Mito_morph_reg PF14972.6 ORF5573 - 0.0062 16.2 1.3 0.0084 15.7 1.1 1.3 1 1 0 1 1 1 1 Mitochondrial morphogenesis regulator SYF2 PF08231.12 ORF54610 - 0.04 14.3 0.6 0.05 14.0 0.6 1.2 1 0 0 1 1 1 0 SYF2 splicing factor COP23 PF14218.6 ORF54610 - 0.074 12.8 0.1 0.092 12.5 0.1 1.1 1 0 0 1 1 1 0 Circadian oscillating protein COP23 CathepsinC_exc PF08773.11 ORF54610 - 0.08 13.2 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Cathepsin C exclusion domain Trs65 PF12735.7 ORF54315 - 0.0019 17.7 0.0 0.6 9.5 0.0 2.0 1 1 1 2 2 2 2 TRAPP trafficking subunit Trs65 IcmF_C PF06744.12 ORF54118 - 0.049 13.2 0.0 0.061 12.9 0.0 1.2 1 0 0 1 1 1 0 Type VI secretion protein IcmF C-terminal Arrestin_N PF00339.29 ORF54002 - 8.6e-08 32.4 0.0 1.1e-07 32.0 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Rgp1 PF08737.10 ORF54002 - 0.0044 16.3 0.1 0.6 9.2 0.0 2.0 1 1 1 2 2 2 2 Rgp1 SmpA_OmlA PF04355.13 ORF54002 - 0.18 11.6 3.9 1.6 8.5 0.1 2.8 2 1 1 3 3 3 0 SmpA / OmlA family DUF4692 PF15763.5 ORF50295 - 2.8 8.4 7.9 0.45 11.0 0.6 2.0 2 0 0 2 2 2 0 Regulator of human erythroid cell expansion (RHEX) DKNYY PF13644.6 ORF49766 - 0.013 16.3 1.9 0.016 16.0 1.9 1.3 1 1 0 1 1 1 0 DKNYY family MFS_1 PF07690.16 ORF49672 - 1.3e-09 37.5 1.3 1.5e-09 37.3 1.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF2863 PF11062.8 ORF48849 - 0.16 10.3 3.8 0.2 10.0 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2863) DUF4407 PF14362.6 ORF48849 - 1 8.7 12.4 1.3 8.3 12.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GrpE PF01025.19 ORF48849 - 1.4 8.5 19.0 2.3 7.9 19.0 1.4 1 0 0 1 1 1 0 GrpE Allexi_40kDa PF05549.11 ORF48849 - 2.5 7.6 8.5 3 7.3 8.5 1.3 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF948 PF06103.11 ORF48849 - 2.7 8.3 6.3 2.7 8.3 4.2 2.1 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF3160 PF11369.8 ORF48849 - 4.4 5.6 16.4 0.28 9.6 8.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3160) Exonuc_VII_L PF02601.15 ORF48849 - 9.4 5.7 16.4 11 5.4 16.4 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Macro PF01661.21 ORF42803 - 5.4e-13 49.0 0.0 8.2e-13 48.4 0.0 1.3 1 0 0 1 1 1 1 Macro domain TPR_1 PF00515.28 ORF4123 - 9e-07 28.5 2.8 0.00092 18.9 0.5 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF4123 - 9.1e-07 28.5 1.9 0.00078 19.4 0.2 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF4123 - 0.00095 19.2 1.2 0.4 11.0 0.2 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF4123 - 0.001 19.7 0.0 0.015 16.1 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF4123 - 0.009 16.5 0.6 0.076 13.5 0.1 2.5 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF4123 - 0.13 12.9 1.1 1.8 9.4 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF4123 - 0.66 10.5 3.0 23 5.7 0.0 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat EF-hand_1 PF00036.32 ORF4096 - 3.5e-26 88.8 12.5 7.3e-07 28.3 0.1 4.2 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF4096 - 6e-25 85.0 10.3 1.7e-07 30.6 0.2 4.2 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF4096 - 7.1e-24 84.1 6.6 2.6e-13 50.2 1.9 2.3 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF4096 - 2.1e-22 77.6 8.7 1.7e-06 27.2 0.3 4.2 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF4096 - 3.5e-16 58.8 8.6 4e-06 26.6 1.5 4.1 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF4096 - 6.3e-14 52.3 2.4 2.4e-06 27.8 0.6 2.0 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF4096 - 8.3e-06 26.0 0.8 0.0021 18.4 0.2 2.6 2 1 0 2 2 2 1 EF-hand domain EF-hand_10 PF14788.6 ORF4096 - 1.4e-05 24.8 6.1 0.00019 21.2 0.6 3.0 3 1 1 4 4 4 1 EF hand DUF1398 PF07166.11 ORF4096 - 0.00036 20.6 0.4 0.00066 19.7 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1398) EF-hand_4 PF12763.7 ORF4096 - 0.00047 20.1 2.9 0.022 14.7 0.7 2.4 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 ORF4096 - 0.0014 18.6 1.8 3.7 7.4 0.1 3.4 2 2 2 4 4 4 2 Caleosin related protein La PF05383.17 ORF4096 - 0.012 15.7 0.4 0.2 11.7 0.1 2.6 2 2 0 2 2 2 0 La domain EF-hand_13 PF17958.1 ORF4096 - 0.034 13.9 0.1 8.6 6.2 0.0 3.0 3 1 1 4 4 4 0 EF-hand domain DUF4552 PF15089.6 ORF4096 - 0.049 12.7 2.7 0.059 12.4 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) SWIRM PF04433.17 ORF4096 - 0.069 13.5 0.3 4.5 7.7 0.1 2.3 1 1 1 2 2 2 0 SWIRM domain DUF1156 PF06634.12 ORF40947 - 0.023 14.8 0.1 0.084 13.0 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1156) Pterin_4a PF01329.19 ORF40258 - 1.2e-12 47.8 0.0 1.7e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase QWRF PF04484.12 ORF40229 - 0.59 9.8 8.2 0.18 11.5 0.8 2.1 2 0 0 2 2 2 0 QWRF family AP4E_app_platf PF14807.6 ORF40173 - 0.045 14.1 0.1 0.087 13.2 0.1 1.5 1 1 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform DUF2632 PF10943.8 ORF39979 - 0.0037 16.9 0.6 0.0057 16.3 0.4 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2632) EABR PF12180.8 ORF39344 - 0.021 14.4 0.4 0.044 13.4 0.4 1.5 1 0 0 1 1 1 0 TSG101 and ALIX binding domain of CEP55 Eno-Rase_FAD_bd PF07055.12 ORF38743 - 0.16 12.4 0.0 0.29 11.6 0.0 1.4 1 0 0 1 1 1 0 Enoyl reductase FAD binding domain DUF5477 PF17571.2 ORF38493 - 0.22 11.7 5.1 0.68 10.1 0.1 2.7 2 1 0 2 2 2 0 Family of unknown function (DUF5477) RIC3 PF15361.6 ORF37806 - 0.013 15.8 0.1 0.02 15.3 0.1 1.2 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 DUF4446 PF14584.6 ORF37806 - 0.028 14.4 0.8 0.039 13.9 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) EMP24_GP25L PF01105.24 ORF37806 - 0.029 14.3 0.9 0.041 13.8 0.9 1.4 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD DUF4834 PF16118.5 ORF37806 - 0.041 14.8 0.9 0.07 14.1 0.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) MitMem_reg PF13012.6 ORF37806 - 0.096 13.1 0.4 0.15 12.4 0.4 1.3 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function RhaT PF06379.12 ORF36749 - 0.052 12.7 1.6 0.064 12.4 1.6 1.2 1 0 0 1 1 1 0 L-rhamnose-proton symport protein (RhaT) MerR-DNA-bind PF09278.11 ORF36002 - 0.024 15.2 7.0 0.11 13.0 1.2 2.2 2 0 0 2 2 2 0 MerR, DNA binding FliD_N PF02465.18 ORF36002 - 0.069 13.8 1.9 0.073 13.8 0.7 1.6 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF4407 PF14362.6 ORF36002 - 0.14 11.5 3.3 0.16 11.3 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4986 PF16375.5 ORF36002 - 0.22 12.2 1.0 0.34 11.6 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function OmpH PF03938.14 ORF36002 - 0.26 11.6 10.6 0.41 11.0 10.6 1.3 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Macoilin PF09726.9 ORF36002 - 0.33 9.5 7.4 0.39 9.2 7.4 1.0 1 0 0 1 1 1 0 Macoilin family DASH_Spc19 PF08287.11 ORF36002 - 0.33 10.8 9.1 0.43 10.5 9.1 1.1 1 0 0 1 1 1 0 Spc19 YojJ PF10372.9 ORF36002 - 1.1 9.4 3.8 0.45 10.6 1.6 1.5 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus G-gamma PF00631.22 ORF36002 - 4.1 7.5 5.7 32 4.6 4.5 2.5 2 1 1 3 3 3 0 GGL domain CinA PF02464.17 ORF35742 - 0.075 12.6 0.1 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 Competence-damaged protein RCC1_2 PF13540.6 ORF35721 - 0.00064 19.4 0.5 0.17 11.7 0.1 2.6 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF35721 - 0.014 15.5 0.0 0.52 10.4 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PheRS_DBD2 PF18554.1 ORF35721 - 1.4 9.0 9.4 16 5.6 0.2 3.2 3 0 0 3 3 3 0 PheRS DNA binding domain 2 EF-hand_7 PF13499.6 ORF3522 - 1.1e-08 35.3 0.4 1.6e-08 34.8 0.4 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF3522 - 7.8e-05 22.0 0.1 0.11 12.1 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF3522 - 0.015 15.2 0.0 1.7 8.8 0.5 2.3 2 0 0 2 2 2 0 EF-hand domain EF-hand_8 PF13833.6 ORF3522 - 0.057 13.3 0.2 1.9 8.4 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain pair IBR PF01485.21 ORF34599 - 0.00014 22.1 13.9 0.00023 21.3 13.9 1.4 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain DivIC PF04977.15 ORF34581 - 0.015 15.0 4.0 0.38 10.5 0.1 2.4 2 1 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF34581 - 0.028 14.6 5.6 0.063 13.5 1.0 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Imm51 PF15595.6 ORF34581 - 0.035 14.1 2.4 1.9 8.4 0.4 2.2 2 0 0 2 2 2 0 Immunity protein 51 ABC_tran_CTD PF16326.5 ORF34581 - 0.052 13.8 8.1 0.07 13.4 1.1 3.0 3 0 0 3 3 3 0 ABC transporter C-terminal domain KELK PF15796.5 ORF34581 - 0.075 13.5 0.6 0.075 13.5 0.6 2.3 2 1 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase V-ATPase_G_2 PF16999.5 ORF34581 - 0.13 12.7 1.2 1.6 9.2 0.0 2.1 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF1943 PF09172.11 ORF34581 - 0.18 11.0 5.1 0.19 10.9 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) FeoB_Cyto PF17910.1 ORF34581 - 1.3 9.6 6.1 0.59 10.7 0.5 2.3 2 1 0 2 2 2 0 FeoB cytosolic helical domain MORN PF02493.20 ORF33838 - 8e-17 60.0 32.3 5.8e-06 25.9 3.0 5.6 5 1 0 5 5 5 4 MORN repeat DUF3048_C PF17479.2 ORF33838 - 0.0052 17.1 6.2 0.13 12.6 0.4 2.6 1 1 1 2 2 2 2 Protein of unknown function (DUF3048) C-terminal domain Homeobox_KN PF05920.11 ORF33516 - 4.2e-14 52.2 1.3 9.3e-14 51.1 0.6 1.9 2 0 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF33516 - 4.4e-06 26.5 0.7 8.1e-06 25.6 0.7 1.5 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF33516 - 0.042 13.3 0.1 0.088 12.3 0.1 1.5 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez CCDC24 PF15669.5 ORF32761 - 2.8 7.8 7.2 3.7 7.4 7.2 1.4 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 24 family PilI PF10623.9 ORF32468 - 0.13 12.4 2.8 8.1 6.7 0.1 2.6 2 0 0 2 2 2 0 Plasmid conjugative transfer protein PilI zf-C2HC_2 PF13913.6 ORF3150 - 4e-11 42.5 2.3 5.8e-11 42.0 2.3 1.3 1 0 0 1 1 1 1 zinc-finger of a C2HC-type zf-C2H2 PF00096.26 ORF3150 - 0.0012 19.1 0.5 0.0029 18.0 0.5 1.7 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF3150 - 0.031 15.1 4.6 0.033 15.0 2.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Band_3_cyto PF07565.13 ORF30994 - 0.3 10.9 5.8 0.37 10.6 5.8 1.0 1 0 0 1 1 1 0 Band 3 cytoplasmic domain UPF0093 PF03653.13 ORF30972 - 0.042 14.1 5.6 0.053 13.7 5.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) DUF3852 PF12963.7 ORF30972 - 2.2 8.7 9.4 6.3 7.2 2.0 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3852) DUF3960 PF13142.6 ORF28570 - 0.018 15.1 0.0 6.7 6.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3960) zf-C2HC_2 PF13913.6 ORF27974 - 4e-11 42.5 2.3 5.8e-11 42.0 2.3 1.3 1 0 0 1 1 1 1 zinc-finger of a C2HC-type zf-C2H2 PF00096.26 ORF27974 - 0.0012 19.1 0.5 0.0029 18.0 0.5 1.7 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF27974 - 0.031 15.1 4.6 0.033 15.0 2.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Glycoprotein_G PF00802.19 ORF27727 - 0.0013 18.2 7.7 0.0015 17.9 7.7 1.0 1 0 0 1 1 1 1 Pneumovirus attachment glycoprotein G zf-CDGSH PF09360.10 ORF26861 - 0.035 14.3 0.2 0.092 13.0 0.2 1.7 1 0 0 1 1 1 0 Iron-binding zinc finger CDGSH type DUF3629 PF12302.8 ORF26622 - 0.064 12.7 0.1 0.085 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3629) Pyrophosphatase PF00719.19 ORF25618 - 0.034 14.0 0.2 0.042 13.7 0.2 1.1 1 0 0 1 1 1 0 Inorganic pyrophosphatase PMM PF03332.13 ORF24348 - 3.6e-56 190.4 0.1 4e-56 190.3 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic phosphomannomutase S6PP PF05116.13 ORF24348 - 0.093 12.2 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Sucrose-6F-phosphate phosphohydrolase Apidaecin PF00807.17 ORF23660 - 4.2 7.6 11.3 0.17 12.0 4.6 2.2 2 0 0 2 2 2 0 Apidaecin DivIC PF04977.15 ORF22098 - 6.8e-30 102.7 0.0 8.3e-30 102.4 0.0 1.1 1 0 0 1 1 1 1 Septum formation initiator DUF4201 PF13870.6 ORF21854 - 0.012 15.4 2.7 0.42 10.3 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) Blo-t-5 PF11642.8 ORF21854 - 0.024 14.6 0.8 0.28 11.2 0.2 2.2 2 0 0 2 2 2 0 Mite allergen Blo t 5 CENP-F_leu_zip PF10473.9 ORF21854 - 0.035 14.1 3.7 0.16 12.0 0.7 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Ephrin_rec_like PF07699.13 ORF18465 - 0.05 13.4 1.0 8.3 6.3 0.1 2.6 2 0 0 2 2 2 0 Putative ephrin-receptor like DUF1145 PF06611.12 ORF18465 - 0.15 12.1 1.0 13 5.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1145) Integrase_Zn PF02022.19 ORF18465 - 0.38 10.7 1.6 26 4.9 0.1 2.9 3 0 0 3 3 3 0 Integrase Zinc binding domain YIF1 PF03878.15 ORF18054 - 6.8 6.1 11.2 7.9 5.9 11.2 1.1 1 0 0 1 1 1 0 YIF1 DUF3365 PF11845.8 ORF17879 - 0.022 15.1 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3365) TerY_C PF15616.6 ORF16967 - 1.4 9.1 5.8 2.2 8.4 1.2 2.2 2 1 0 2 2 2 0 TerY-C metal binding domain Borrelia_lipo_1 PF05714.11 ORF15723 - 0.00068 19.5 5.1 0.00084 19.2 4.7 1.2 1 1 0 1 1 1 1 Borrelia burgdorferi virulent strain associated lipoprotein CMAS PF02353.20 ORF15723 - 0.037 13.3 0.2 0.047 13.0 0.2 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Histone PF00125.24 ORF15693 - 2.5e-53 179.9 2.7 2.8e-53 179.8 2.7 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF15693 - 7.8e-06 26.5 1.3 9.9e-06 26.2 1.3 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF15693 - 9.7e-05 22.7 0.0 0.00014 22.1 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF15693 - 0.00039 20.5 0.1 0.00075 19.6 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF15693 - 0.0018 18.5 0.1 0.0042 17.3 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF15693 - 0.059 13.4 0.0 0.082 13.0 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Tugs PF17840.1 ORF1556 - 0.07 13.3 0.6 0.33 11.2 0.2 2.2 2 1 0 2 2 2 0 Tethering Ubl4a to BAGS domain DEFB136 PF17333.2 ORF152753 - 0.58 10.2 3.4 0.37 10.8 0.9 2.1 2 1 0 2 2 2 0 Beta defensin 136 PSD5 PF07637.11 ORF15257 - 0.025 14.9 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1595) DUF126 PF01989.16 ORF152390 - 0.0072 16.1 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain MAM33 PF02330.16 ORF152327 - 1e-07 32.2 3.3 1.3e-07 31.8 3.3 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein SERTA PF06031.13 ORF152327 - 0.15 11.8 0.7 0.29 10.8 0.7 1.4 1 0 0 1 1 1 0 SERTA motif EF-hand_7 PF13499.6 ORF150751 - 1.1e-08 35.3 0.4 1.6e-08 34.8 0.4 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF150751 - 7.8e-05 22.0 0.1 0.11 12.1 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF150751 - 0.015 15.2 0.0 1.7 8.8 0.5 2.3 2 0 0 2 2 2 0 EF-hand domain EF-hand_8 PF13833.6 ORF150751 - 0.057 13.3 0.2 1.9 8.4 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain pair MORN PF02493.20 ORF149763 - 5.3e-16 57.5 37.9 4.5e-08 32.5 3.2 5.9 6 1 0 6 6 6 4 MORN repeat DUF3048_C PF17479.2 ORF149763 - 0.3 11.5 12.3 0.67 10.4 0.6 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain Homeobox_KN PF05920.11 ORF149743 - 5.1e-14 51.9 1.4 9.3e-14 51.1 0.6 1.9 2 0 0 2 2 2 1 Homeobox KN domain Homeodomain PF00046.29 ORF149743 - 4.3e-06 26.5 0.7 8.1e-06 25.6 0.7 1.5 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF149743 - 0.046 13.2 0.1 0.088 12.3 0.1 1.4 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez PARP PF00644.20 ORF148014 - 1e-05 25.2 0.0 1.8e-05 24.4 0.0 1.5 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain MORN PF02493.20 ORF147420 - 3.3e-17 61.3 32.0 2.7e-06 27.0 4.3 5.4 5 1 0 5 5 5 4 MORN repeat DUF3048_C PF17479.2 ORF147420 - 0.13 12.7 6.0 3.3 8.1 6.0 2.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain DUF126 PF01989.16 ORF147386 - 0.0072 16.1 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain DUF1836 PF08876.11 ORF147264 - 0.0089 16.1 2.2 0.025 14.6 2.1 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF1836) SLATT_1 PF18181.1 ORF146726 - 0.13 12.2 0.1 9.7 6.1 0.0 2.1 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 Cnn_1N PF07989.11 ORF146632 - 0.037 14.2 1.0 0.072 13.2 1.0 1.5 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 YabP PF07873.11 ORF146632 - 0.11 12.3 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 YabP family DUF3586 PF12131.8 ORF144761 - 0.0025 18.0 0.7 0.0036 17.5 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3586) PilI PF10623.9 ORF144259 - 0.13 12.4 2.8 8.1 6.7 0.1 2.6 2 0 0 2 2 2 0 Plasmid conjugative transfer protein PilI DUF4338 PF14236.6 ORF142685 - 0.035 13.4 0.0 0.041 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4338) AbrB-like PF14250.6 ORF142365 - 0.15 12.2 0.0 5.7 7.1 0.0 2.7 3 0 0 3 3 3 0 AbrB-like transcriptional regulator DUF1145 PF06611.12 ORF142365 - 0.15 12.0 1.0 13 5.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1145) Phage_BR0599 PF09356.10 ORF142365 - 0.23 11.8 2.3 21 5.6 0.0 2.9 3 0 0 3 3 3 0 Phage conserved hypothetical protein BR0599 CRAM_rpt PF07016.11 ORF142365 - 0.99 9.3 8.3 4.5 7.2 1.2 3.5 3 0 0 3 3 3 0 Cysteine-rich acidic integral membrane protein precursor Ephrin_rec_like PF07699.13 ORF142365 - 4.5 7.1 9.1 12 5.7 0.8 3.2 3 0 0 3 3 3 0 Putative ephrin-receptor like LpoB PF13036.6 ORF140571 - 0.011 15.7 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB UPF0231 PF06062.11 ORF140454 - 4.6e-41 139.9 2.0 5.3e-41 139.7 2.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0231) BST2 PF16716.5 ORF140243 - 2.1 9.0 11.5 1.6 9.4 6.1 2.0 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 RLI PF04068.15 ORF140171 - 0.018 14.9 1.1 0.035 13.9 1.1 1.4 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI Pterin_4a PF01329.19 ORF139698 - 4.1e-13 49.3 0.0 5.5e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase DNA_pack_N PF02500.15 ORF139698 - 0.071 12.9 0.1 0.075 12.9 0.1 1.0 1 0 0 1 1 1 0 Probable DNA packing protein, N-terminus LpoB PF13036.6 ORF139652 - 0.011 15.7 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB UPF0223 PF05256.12 ORF139460 - 0.047 14.0 1.9 0.94 9.9 0.1 2.6 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0223) WD-3 PF09765.9 ORF139350 - 0.0073 15.7 1.1 0.0088 15.4 1.1 1.1 1 0 0 1 1 1 1 WD-repeat region Pkinase PF00069.25 ORF138830 - 9.5e-12 44.8 0.0 1.1e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Histone PF00125.24 ORF138643 - 2.8e-48 163.6 1.6 3.1e-48 163.5 1.6 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 ORF138643 - 0.00047 20.2 0.2 0.00069 19.7 0.2 1.3 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 ORF138643 - 0.043 14.2 0.1 0.066 13.6 0.1 1.2 1 0 0 1 1 1 0 CENP-S protein CBFD_NFYB_HMF PF00808.23 ORF138643 - 0.14 12.5 1.1 0.16 12.3 0.2 1.6 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone DUF4840 PF16128.5 ORF138643 - 0.15 12.1 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4840) DUF1460 PF07313.12 ORF138548 - 0.034 13.5 0.8 3.9 6.8 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1460) EF-hand_7 PF13499.6 ORF137933 - 1.1e-08 35.3 0.4 1.6e-08 34.8 0.4 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF137933 - 7.8e-05 22.0 0.1 0.11 12.1 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF137933 - 0.015 15.2 0.0 1.7 8.8 0.5 2.3 2 0 0 2 2 2 0 EF-hand domain EF-hand_8 PF13833.6 ORF137933 - 0.057 13.3 0.2 1.9 8.4 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain pair bZIP_Maf PF03131.17 ORF135551 - 0.33 11.5 10.1 0.09 13.3 6.4 1.9 2 0 0 2 2 2 0 bZIP Maf transcription factor Mem_trans PF03547.18 ORF135551 - 8.4 4.7 6.2 8 4.7 6.2 1.1 1 0 0 1 1 1 0 Membrane transport protein SQHop_cyclase_N PF13249.6 ORF134531 - 0.17 11.0 0.0 0.2 10.7 0.0 1.1 1 0 0 1 1 1 0 Squalene-hopene cyclase N-terminal domain Lipid_bd PF12888.7 ORF134491 - 0.011 16.2 0.1 0.019 15.4 0.1 1.4 1 0 0 1 1 1 0 Lipid-binding putative hydrolase Pterin_4a PF01329.19 ORF134369 - 4.1e-13 49.3 0.0 5.5e-13 48.9 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase DNA_pack_N PF02500.15 ORF134369 - 0.071 12.9 0.1 0.075 12.9 0.1 1.0 1 0 0 1 1 1 0 Probable DNA packing protein, N-terminus CBM_25 PF03423.13 ORF133850 - 0.13 12.5 0.6 0.21 11.9 0.6 1.3 1 0 0 1 1 1 0 Carbohydrate binding domain (family 25) Wyosine_form PF08608.12 ORF13304 - 0.15 12.5 0.2 0.36 11.2 0.0 1.8 2 0 0 2 2 2 0 Wyosine base formation Longin PF13774.6 ORF132775 - 1.2e-06 28.5 0.3 1.6e-06 28.1 0.3 1.3 1 0 0 1 1 1 1 Regulated-SNARE-like domain Stc1 PF12898.7 ORF132065 - 0.19 12.3 5.6 0.8 10.3 0.6 2.6 1 1 1 2 2 2 0 Stc1 domain Bowman-Birk_leg PF00228.20 ORF132065 - 1.4 9.4 12.8 7.6 7.0 0.3 3.5 3 0 0 3 3 3 0 Bowman-Birk serine protease inhibitor family Tnp_zf-ribbon_2 PF13842.6 ORF132065 - 1.9 9.4 11.2 5.8 7.8 0.4 3.8 3 0 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon DUF2083 PF09856.9 ORF132065 - 5.4 6.8 8.2 6.4 6.6 0.4 3.0 3 0 0 3 3 3 0 Predicted transcriptional regulator (DUF2083) FGFR3_TM PF18123.1 ORF132065 - 9.5 5.8 15.6 4.6 6.8 0.5 4.4 4 0 0 4 4 4 0 Fibroblast growth factor receptor 3 transmembrane domain Secapin PF17521.2 ORF131654 - 0.0033 17.2 0.2 0.0033 17.2 0.2 2.4 3 0 0 3 3 3 1 Honey bee peptides DUF836 PF05768.14 ORF129853 - 0.02 15.3 1.3 0.035 14.5 1.3 1.4 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) MscL PF01741.18 ORF129421 - 1.4e-45 154.5 3.1 1.5e-45 154.4 3.1 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL UPF0239 PF06783.11 ORF129421 - 0.0081 16.3 0.6 0.029 14.5 0.0 1.9 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0239) OAD_gamma PF04277.13 ORF129421 - 0.0094 16.5 0.4 0.0094 16.5 0.4 1.7 2 0 0 2 2 2 1 Oxaloacetate decarboxylase, gamma chain DUF3487 PF11990.8 ORF129421 - 0.027 14.3 1.7 0.47 10.3 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) Ac110_PIF PF07280.11 ORF129421 - 0.076 12.8 0.1 0.2 11.5 0.1 1.6 1 0 0 1 1 1 0 Per os infectivity factor AC110 Rad60-SLD PF11976.8 ORF128739 - 0.0021 17.8 1.1 2.3 8.1 0.1 3.0 1 1 1 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Myosin_head PF00063.21 ORF128739 - 0.0042 15.4 2.0 0.006 14.9 0.1 1.8 1 1 1 2 2 2 1 Myosin head (motor domain) Trp_halogenase PF04820.14 ORF128739 - 0.0049 15.8 0.1 0.0057 15.6 0.1 1.0 1 0 0 1 1 1 1 Tryptophan halogenase THDPS_N_2 PF14805.6 ORF128739 - 0.025 14.8 0.1 7.4 6.9 0.0 2.6 2 1 0 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal DUF2043 PF09740.9 ORF128739 - 0.079 13.7 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2043) DUF126 PF01989.16 ORF128682 - 0.0072 16.1 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain DUF2934 PF11154.8 ORF126977 - 0.17 11.6 0.0 0.29 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2934) IDO PF01231.18 ORF126133 - 0.17 10.7 0.0 0.19 10.5 0.0 1.0 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase Histone PF00125.24 ORF124949 - 1.8e-53 180.4 3.2 2e-53 180.2 3.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 ORF124949 - 1.2e-05 25.9 1.9 1.5e-05 25.6 1.9 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 ORF124949 - 0.00014 22.1 0.0 0.00023 21.5 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 ORF124949 - 0.0003 20.9 0.1 0.00057 20.0 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF124949 - 0.0018 18.5 0.1 0.0042 17.3 0.1 1.6 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF124949 - 0.05 13.7 0.0 0.07 13.2 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit DUF126 PF01989.16 ORF124577 - 0.0072 16.1 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain Bacteriocin_II PF01721.18 ORF12351 - 0.23 11.6 0.2 0.95 9.6 0.0 2.1 2 0 0 2 2 2 0 Class II bacteriocin Retrotran_gag_2 PF14223.6 ORF122462 - 0.029 14.1 0.1 0.035 13.8 0.1 1.3 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type zf-Sec23_Sec24 PF04810.15 ORF122462 - 0.044 13.8 0.1 0.12 12.4 0.1 1.7 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger LRR_2 PF07723.13 ORF122462 - 0.075 13.7 0.4 8.5 7.2 0.2 3.1 3 0 0 3 3 3 0 Leucine Rich Repeat DivIC PF04977.15 ORF1222 - 0.015 15.0 4.0 0.38 10.5 0.1 2.4 2 1 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF1222 - 0.028 14.6 5.6 0.063 13.5 1.0 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Imm51 PF15595.6 ORF1222 - 0.035 14.1 2.4 1.9 8.4 0.4 2.2 2 0 0 2 2 2 0 Immunity protein 51 ABC_tran_CTD PF16326.5 ORF1222 - 0.052 13.8 8.1 0.07 13.4 1.1 3.0 3 0 0 3 3 3 0 ABC transporter C-terminal domain KELK PF15796.5 ORF1222 - 0.075 13.5 0.6 0.075 13.5 0.6 2.3 2 1 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase V-ATPase_G_2 PF16999.5 ORF1222 - 0.13 12.7 1.2 1.6 9.2 0.0 2.1 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF1943 PF09172.11 ORF1222 - 0.18 11.0 5.1 0.19 10.9 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) FeoB_Cyto PF17910.1 ORF1222 - 1.3 9.6 6.1 0.59 10.7 0.5 2.3 2 1 0 2 2 2 0 FeoB cytosolic helical domain FIST_C PF10442.9 ORF122005 - 0.075 13.0 0.2 0.098 12.6 0.2 1.2 1 0 0 1 1 1 0 FIST C domain Jnk-SapK_ap_N PF09744.9 ORF122005 - 0.17 12.1 6.8 0.25 11.6 6.8 1.3 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 H-kinase_dim PF02895.14 ORF122005 - 0.23 11.9 2.8 13 6.2 0.2 2.3 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain COG5 PF10392.9 ORF122005 - 0.24 11.6 6.0 0.69 10.1 5.1 2.0 1 1 1 2 2 2 0 Golgi transport complex subunit 5 ABC_tran_Xtn PF12848.7 ORF122005 - 0.26 11.4 3.3 0.58 10.2 0.4 2.3 1 1 1 2 2 2 0 ABC transporter Spc7 PF08317.11 ORF122005 - 0.62 8.9 7.4 0.82 8.5 7.4 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein CCDC-167 PF15188.6 ORF122005 - 2.2 8.7 7.8 6.1 7.3 3.2 2.7 2 1 1 3 3 3 0 Coiled-coil domain-containing protein 167 Disaggr_repeat PF06848.11 ORF122002 - 0.063 13.0 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 Disaggregatase related repeat DivIC PF04977.15 ORF121871 - 0.015 15.0 4.0 0.38 10.5 0.1 2.4 2 1 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF121871 - 0.028 14.6 5.6 0.063 13.5 1.0 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Imm51 PF15595.6 ORF121871 - 0.035 14.1 2.4 1.9 8.4 0.4 2.2 2 0 0 2 2 2 0 Immunity protein 51 ABC_tran_CTD PF16326.5 ORF121871 - 0.052 13.8 8.1 0.07 13.4 1.1 3.0 3 0 0 3 3 3 0 ABC transporter C-terminal domain KELK PF15796.5 ORF121871 - 0.075 13.5 0.6 0.075 13.5 0.6 2.3 2 1 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase V-ATPase_G_2 PF16999.5 ORF121871 - 0.13 12.7 1.2 1.6 9.2 0.0 2.1 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF1943 PF09172.11 ORF121871 - 0.18 11.0 5.1 0.19 10.9 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) FeoB_Cyto PF17910.1 ORF121871 - 1.3 9.6 6.1 0.59 10.7 0.5 2.3 2 1 0 2 2 2 0 FeoB cytosolic helical domain CRCB PF02537.15 ORF121551 - 0.19 12.0 1.7 0.29 11.5 1.7 1.3 1 0 0 1 1 1 0 CrcB-like protein, Camphor Resistance (CrcB) Transp_Tc5_C PF04236.15 ORF121551 - 3.8 7.9 6.4 19 5.7 0.7 2.5 2 0 0 2 2 2 0 Tc5 transposase C-terminal domain FKBP_C PF00254.28 ORF120103 - 4.1e-22 78.3 0.0 5.9e-22 77.8 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase C2 PF00168.30 ORF119236 - 0.00045 20.5 0.0 0.00063 20.0 0.0 1.2 1 0 0 1 1 1 1 C2 domain KIAA1430 PF13879.6 ORF118956 - 0.00021 22.0 3.9 0.00039 21.1 3.9 1.5 1 1 0 1 1 1 1 KIAA1430 homologue Peptidase_M29 PF02073.15 ORF118956 - 0.1 11.3 0.2 0.12 11.2 0.2 1.1 1 0 0 1 1 1 0 Thermophilic metalloprotease (M29) PilI PF10623.9 ORF118236 - 0.13 12.4 2.8 8.1 6.7 0.1 2.6 2 0 0 2 2 2 0 Plasmid conjugative transfer protein PilI Ribosomal_S21 PF01165.20 ORF116109 - 3.6e-21 74.6 6.5 3.6e-21 74.6 6.5 2.0 1 1 1 2 2 2 1 Ribosomal protein S21 DUF126 PF01989.16 ORF114472 - 0.0072 16.1 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Aconitase X swivel domain Ldh_2 PF02615.14 ORF11407 - 2e-18 66.7 0.0 2.2e-18 66.5 0.0 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase UPF0542 PF15086.6 ORF113855 - 0.063 13.2 0.5 0.063 13.2 0.5 2.3 2 1 1 3 3 3 0 Uncharacterised protein family UPF0542 FA_desaturase PF00487.24 ORF113855 - 0.28 11.0 1.5 0.4 10.5 1.5 1.1 1 0 0 1 1 1 0 Fatty acid desaturase HemY_N PF07219.13 ORF113855 - 4.9 7.4 4.9 33 4.7 0.1 2.4 2 0 0 2 2 2 0 HemY protein N-terminus DUF3886 PF13025.6 ORF112196 - 0.12 12.5 12.7 0.21 11.8 12.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3886) Conotoxin PF02950.17 ORF112196 - 9.1 7.4 13.4 0.28 12.2 2.8 2.2 2 0 0 2 2 2 0 Conotoxin TIP120 PF08623.10 ORF111905 - 0.0034 17.2 0.9 0.0042 16.9 0.9 1.1 1 0 0 1 1 1 1 TATA-binding protein interacting (TIP20) LAGLIDADG_1 PF00961.19 ORF111905 - 0.011 16.7 1.4 0.011 16.7 1.4 2.0 1 1 1 2 2 2 0 LAGLIDADG endonuclease KIAA1430 PF13879.6 ORF111868 - 0.0019 19.0 10.4 0.0024 18.6 10.4 1.2 1 0 0 1 1 1 1 KIAA1430 homologue Heme_oxygenase PF01126.20 ORF111868 - 0.023 14.5 0.4 0.034 13.9 0.4 1.2 1 0 0 1 1 1 0 Heme oxygenase DUF5463 PF17551.2 ORF110857 - 1.1 9.3 6.1 3.8 7.5 6.1 2.1 1 1 0 1 1 1 0 Family of unknown function (DUF5463) DUF1385 PF07136.11 ORF110605 - 0.011 15.0 0.6 0.014 14.7 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) MAM33 PF02330.16 ORF110084 - 6.1e-18 65.6 0.2 8.3e-18 65.1 0.2 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein DUF2620 PF10941.8 ORF108943 - 2.6e-48 163.0 2.8 3e-48 162.8 2.8 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF2620 LacAB_rpiB PF02502.18 ORF108943 - 0.012 15.6 0.8 0.023 14.7 0.3 1.7 1 1 1 2 2 2 0 Ribose/Galactose Isomerase TFIIB_C_1 PF18542.1 ORF107731 - 0.029 14.4 0.1 0.044 13.8 0.1 1.4 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 Radical_SAM_C PF16199.5 ORF107471 - 0.062 13.3 0.0 0.091 12.8 0.0 1.2 1 0 0 1 1 1 0 Radical_SAM C-terminal domain ECM1 PF05782.11 ORF105246 - 0.036 13.0 10.6 0.04 12.9 10.6 1.1 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) FAA_hydro_N_2 PF18288.1 ORF105246 - 1.3 9.5 5.1 6.9 7.2 0.3 3.0 2 1 1 3 3 3 0 Fumarylacetoacetase N-terminal domain 2 DUF4524 PF15025.6 ORF105246 - 6.1 6.6 9.8 0.17 11.6 3.7 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4524) RecG_N PF17190.4 ORF102406 - 0.055 14.2 2.1 0.31 11.8 1.0 2.0 2 0 0 2 2 2 0 RecG N-terminal helical domain TssC PF17541.2 ORF102406 - 0.094 11.5 0.9 0.12 11.2 0.9 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssC, VipB SHIPPO-rpt PF07004.12 ORF10231 - 1.4e-12 47.9 26.5 0.00017 22.4 0.3 4.3 4 0 0 4 4 4 4 Sperm-tail PG-rich repeat ECR1_N PF14382.6 ORF10231 - 0.029 14.2 0.0 6.2 6.7 0.0 3.2 3 0 0 3 3 3 0 Exosome complex exonuclease RRP4 N-terminal region DUF3844 PF12955.7 ORF101564 - 1.4 9.1 6.9 1.1 9.5 4.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3844) Ribosomal_L16 PF00252.18 ORF101547 - 3.7e-47 159.7 0.7 4.1e-47 159.5 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DUF982 PF06169.12 ORF101547 - 0.28 11.2 1.7 9 6.4 0.2 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF982) Pkinase PF00069.25 ORF101326 - 2.2e-13 50.2 0.0 4.5e-13 49.2 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101326 - 0.00086 18.7 0.0 0.001 18.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase She2p PF11435.8 ORF101326 - 0.049 13.3 0.1 0.063 12.9 0.1 1.3 1 0 0 1 1 1 0 RNA binding protein She2p RL11D PF11088.8 NODE_47564_length_403_cov_1.600543_g39713_i0forward_frame_1 - 0.16 12.3 0.1 0.16 12.3 0.1 1.6 2 0 0 2 2 2 0 Glycoprotein encoding membrane proteins RL5A and RL6 Ipi1_N PF12333.8 NODE_47561_length_403_cov_1.875000_g39710_i0reverse_frame_1 - 0.17 12.5 0.8 0.36 11.5 0.8 1.5 1 0 0 1 1 1 0 Rix1 complex component involved in 60S ribosome maturation # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks191.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks191.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks191.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks191.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L29e PF01779.17 NODE_47554_length_403_cov_2.258152_g39703_i0forward_frame_1 - 0.17 12.2 0.3 0.17 12.2 0.3 2.4 2 0 0 2 2 2 0 Ribosomal L29e protein family Response_reg PF00072.24 NODE_47543_length_403_cov_2.836957_g39692_i0reverse_frame_1 - 2.6e-22 79.1 0.0 3.3e-22 78.8 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain GDP_Man_Dehyd PF16363.5 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 1.6e-43 149.4 0.1 1.9e-43 149.2 0.1 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 2.5e-31 109.0 0.0 2.8e-31 108.8 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 9.2e-10 38.1 0.0 1.1e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 0.002 17.3 0.0 0.0049 16.0 0.0 1.6 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 0.015 14.4 0.1 0.027 13.6 0.1 1.4 1 1 0 1 1 1 0 RmlD substrate binding domain FANCA_interact PF15751.5 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 0.11 13.0 0.1 0.15 12.6 0.1 1.2 1 0 0 1 1 1 0 FAAP20 FANCA interaction domain adh_short PF00106.25 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_1 - 0.15 11.5 0.0 0.58 9.6 0.0 1.7 2 0 0 2 2 2 0 short chain dehydrogenase Keratin_matx PF04579.12 NODE_47537_length_403_cov_3.641304_g39686_i0forward_frame_1 - 0.077 13.3 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein RRXRR PF14239.6 NODE_47536_length_403_cov_3.760870_g39685_i0reverse_frame_1 - 0.13 12.1 3.2 0.19 11.6 3.2 1.2 1 0 0 1 1 1 0 RRXRR protein DCP1 PF06058.13 NODE_47532_length_403_cov_15.899457_g39681_i0reverse_frame_1 - 0.029 14.3 2.0 0.056 13.4 0.6 2.0 2 0 0 2 2 2 0 Dcp1-like decapping family SH3_12 PF18129.1 NODE_47510_length_403_cov_79.502717_g39659_i0forward_frame_1 - 0.021 14.9 0.0 4.6 7.4 0.0 2.4 2 0 0 2 2 2 0 Xrn1 SH3-like domain Methyltransf_20 PF12147.8 NODE_47499_length_403_cov_104.290761_g39648_i0forward_frame_1 - 0.093 11.9 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 Putative methyltransferase RabGAP-TBC PF00566.18 NODE_47483_length_403_cov_199.326087_g39632_i0forward_frame_1 - 0.099 12.3 6.7 0.18 11.5 4.5 1.9 1 1 1 2 2 2 0 Rab-GTPase-TBC domain zf-CCCH_3 PF15663.5 NODE_47482_length_403_cov_202.779891_g39631_i0reverse_frame_1 - 8.3 6.7 7.4 36 4.6 7.4 2.0 1 1 0 1 1 1 0 Zinc-finger containing family Mucin PF01456.17 NODE_47481_length_403_cov_209.413043_g39630_i0forward_frame_1 - 1.9 8.5 4.3 2.7 8.0 4.3 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF2116 PF09889.9 NODE_47473_length_403_cov_591.005435_g39622_i0reverse_frame_1 - 2.1 8.4 7.5 3.9 7.5 7.5 1.4 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) ASC PF00858.24 NODE_47468_length_404_cov_1.249322_g39619_i0forward_frame_1 - 0.0015 17.6 0.1 0.002 17.2 0.1 1.2 1 0 0 1 1 1 1 Amiloride-sensitive sodium channel GHMP_kinases_N PF00288.26 NODE_47458_length_404_cov_2.059621_g39609_i0reverse_frame_1 - 0.013 15.7 0.0 0.02 15.2 0.0 1.3 1 0 0 1 1 1 0 GHMP kinases N terminal domain HSP90 PF00183.18 NODE_47453_length_404_cov_2.436314_g39604_i0reverse_frame_1 - 0.011 14.7 3.0 0.013 14.4 3.0 1.1 1 0 0 1 1 1 0 Hsp90 protein cNMP_binding PF00027.29 NODE_47450_length_404_cov_3.140921_g39601_i0reverse_frame_1 - 0.0002 21.3 0.0 0.00035 20.6 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF3605 PF12239.8 NODE_47449_length_404_cov_3.262873_g39600_i0reverse_frame_1 - 0.0086 16.4 0.0 0.012 16.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3605) TPR_1 PF00515.28 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 9.6e-14 50.5 0.2 1.4e-07 31.0 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 3.1e-10 39.4 0.7 1.7e-05 24.6 0.0 3.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 5.9e-08 32.9 0.2 0.0058 16.9 0.0 3.3 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 6.3e-08 32.2 0.0 0.00082 19.4 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 6.6e-05 22.7 0.2 0.0078 16.2 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.001 19.3 1.1 0.031 14.5 0.1 2.1 1 1 2 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.0013 19.3 0.0 0.075 13.7 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.0062 17.3 0.0 0.074 13.9 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat Coatomer_E PF04733.14 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.013 14.9 0.0 0.017 14.6 0.0 1.3 1 1 0 1 1 1 0 Coatomer epsilon subunit TPR_11 PF13414.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.019 14.6 0.9 0.033 13.9 0.1 1.9 2 1 0 2 2 2 0 TPR repeat TPR_6 PF13174.6 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.072 13.8 0.0 0.3 11.8 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat Nup54_57_C PF18570.1 NODE_47448_length_404_cov_3.401084_g39599_i0forward_frame_1 - 0.1 12.2 0.1 0.22 11.1 0.1 1.5 1 0 0 1 1 1 0 NUP57/Nup54 C-terminal domain Titin_Ig-rpts PF06582.12 NODE_47446_length_404_cov_4.617886_g39597_i0forward_frame_1 - 0.4 10.7 5.5 19 5.3 0.3 3.4 3 0 0 3 3 3 0 Titin repeat DnaJ PF00226.31 NODE_47439_length_404_cov_61.360434_g39591_i0forward_frame_1 - 3.6e-18 65.4 0.3 3.6e-18 65.4 0.3 1.7 2 0 0 2 2 2 1 DnaJ domain NTPase_I-T PF01931.18 NODE_47439_length_404_cov_61.360434_g39591_i0forward_frame_1 - 0.03 14.1 0.0 0.049 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF84 E2F_CC-MB PF16421.5 NODE_47439_length_404_cov_61.360434_g39591_i0forward_frame_1 - 0.17 12.2 1.8 0.24 11.8 1.8 1.4 1 1 0 1 1 1 0 E2F transcription factor CC-MB domain ribosomal_L24 PF17136.4 NODE_47433_length_404_cov_77.761518_g39585_i0reverse_frame_1 - 5.3e-12 46.0 0.0 1.2e-11 44.8 0.0 1.6 1 0 0 1 1 1 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 RCC1_2 PF13540.6 NODE_47431_length_404_cov_83.593496_g39583_i0reverse_frame_1 - 0.017 14.9 4.7 1.8 8.5 0.1 2.8 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat DUF4604 PF15377.6 NODE_47408_length_404_cov_203.355014_g39560_i0forward_frame_1 - 0.38 11.2 7.2 0.46 10.9 7.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) ICAP-1_inte_bdg PF10480.9 NODE_47389_length_404_cov_31702.333333_g39544_i0reverse_frame_1 - 0.14 12.1 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Beta-1 integrin binding protein DUF2244 PF10003.9 NODE_47377_length_405_cov_2.464865_g39532_i0reverse_frame_1 - 0.45 10.2 2.4 0.63 9.7 2.4 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) VATC PF18716.1 NODE_47367_length_405_cov_3.702703_g39522_i0reverse_frame_1 - 0.17 11.7 2.7 11 6.0 0.1 2.4 2 1 0 2 2 2 0 Vms1-associating treble clef domain DUF3678 PF12435.8 NODE_47359_length_405_cov_58.297297_g39514_i0forward_frame_1 - 0.058 12.8 0.1 0.058 12.8 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) Urocanase PF01175.18 NODE_47352_length_405_cov_70.718919_g39507_i0reverse_frame_1 - 0.038 13.6 0.3 0.058 13.0 0.2 1.3 1 1 1 2 2 2 0 Urocanase Rossmann-like domain Na_H_antiport_1 PF06965.12 NODE_47350_length_405_cov_75.424324_g39505_i0forward_frame_1 - 0.78 8.5 3.3 0.17 10.7 0.4 1.4 1 1 0 2 2 2 0 Na+/H+ antiporter 1 EVC2_like PF12297.8 NODE_47350_length_405_cov_75.424324_g39505_i0forward_frame_1 - 1.5 7.4 2.9 1.9 7.1 2.9 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Cuticle_4 PF15955.5 NODE_47349_length_405_cov_76.829730_g39504_i0reverse_frame_1 - 0.12 13.1 0.2 0.19 12.5 0.2 1.4 1 0 0 1 1 1 0 Cuticle protein SOCS_box PF07525.16 NODE_47349_length_405_cov_76.829730_g39504_i0forward_frame_1 - 0.0075 16.6 0.4 0.073 13.4 0.5 2.3 2 0 0 2 2 2 1 SOCS box CCDC24 PF15669.5 NODE_47346_length_405_cov_81.102703_g39501_i0reverse_frame_1 - 0.025 14.4 1.7 0.031 14.1 1.7 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family FAM199X PF15814.5 NODE_47346_length_405_cov_81.102703_g39501_i0reverse_frame_1 - 2 7.4 13.3 2.4 7.1 13.3 1.1 1 0 0 1 1 1 0 Protein family FAM199X DUF1010 PF06231.11 NODE_47341_length_405_cov_93.929730_g39496_i0reverse_frame_1 - 1.3 9.6 9.5 0.26 11.8 5.6 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1010) Sbt_1 PF05982.12 NODE_47337_length_405_cov_100.213514_g39492_i0reverse_frame_1 - 0.19 11.0 3.2 0.23 10.7 3.2 1.0 1 0 0 1 1 1 0 Na+-dependent bicarbonate transporter superfamily TPR_10 PF13374.6 NODE_47333_length_405_cov_116.140541_g39488_i0forward_frame_1 - 9.4e-17 60.3 5.2 6.6e-10 38.5 0.3 2.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_47333_length_405_cov_116.140541_g39488_i0forward_frame_1 - 8.6e-14 51.6 2.9 2e-12 47.2 0.6 1.9 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_47333_length_405_cov_116.140541_g39488_i0forward_frame_1 - 0.00015 21.8 2.3 0.00064 19.8 1.7 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat DUF1039 PF06287.11 NODE_47333_length_405_cov_116.140541_g39488_i0forward_frame_1 - 0.013 15.9 0.0 0.035 14.5 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1039) TPR_14 PF13428.6 NODE_47333_length_405_cov_116.140541_g39488_i0forward_frame_1 - 0.027 15.3 2.2 1.1 10.2 0.2 2.6 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_47333_length_405_cov_116.140541_g39488_i0forward_frame_1 - 0.033 14.3 2.4 1.3 9.3 0.1 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat FPV060 PF17614.2 NODE_47331_length_405_cov_129.664865_g39486_i0forward_frame_1 - 3.3 7.0 9.5 0.68 9.3 3.7 2.0 2 0 0 2 2 2 0 Viral CC-type chemokine Cas_Csy1 PF09611.10 NODE_47330_length_405_cov_156.097297_g39485_i0reverse_frame_1 - 0.33 10.0 2.2 0.43 9.6 2.2 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) MIT_LIKE_ACTX PF17556.2 NODE_47327_length_405_cov_164.535135_g39482_i0forward_frame_1 - 0.036 14.7 1.4 0.52 10.9 1.4 2.2 1 1 0 1 1 1 0 MIT-like atracotoxin family Peptidase_A22B PF04258.13 NODE_47321_length_405_cov_211.913514_g39476_i0reverse_frame_1 - 2.6e-27 96.1 1.7 3.1e-27 95.8 1.7 1.0 1 0 0 1 1 1 1 Signal peptide peptidase DUF1003 PF06210.11 NODE_47321_length_405_cov_211.913514_g39476_i0reverse_frame_1 - 0.076 13.1 1.0 0.13 12.4 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) Presenilin PF01080.17 NODE_47321_length_405_cov_211.913514_g39476_i0reverse_frame_1 - 2.4 6.8 7.1 0.16 10.7 2.5 1.3 2 0 0 2 2 2 0 Presenilin CBP_CCPA PF17040.5 NODE_47312_length_405_cov_487.451351_g39467_i0reverse_frame_1 - 0.036 14.7 2.5 4.3 8.0 0.6 2.1 2 0 0 2 2 2 0 Cellulose-complementing protein A CLPTM1 PF05602.12 NODE_47300_length_406_cov_1.916442_g39457_i0reverse_frame_3 - 0.00093 18.3 0.9 0.0013 17.8 0.9 1.3 1 1 0 1 1 1 1 Cleft lip and palate transmembrane protein 1 (CLPTM1) Herpes_BBRF1 PF04793.12 NODE_47300_length_406_cov_1.916442_g39457_i0forward_frame_2 - 0.018 14.1 0.4 0.019 14.0 0.4 1.1 1 0 0 1 1 1 0 BRRF1-like protein Trp_dioxygenase PF03301.13 NODE_47290_length_406_cov_2.517520_g39447_i0reverse_frame_3 - 0.11 11.8 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Tryptophan 2,3-dioxygenase DUF4587 PF15248.6 NODE_47283_length_406_cov_3.490566_g39440_i0reverse_frame_3 - 0.027 15.3 0.2 0.044 14.6 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4587) PfkB PF00294.24 NODE_47282_length_406_cov_3.927224_g39439_i0forward_frame_3 - 5.1e-18 65.4 0.0 5.6e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phage_r1t_holin PF16945.5 NODE_47280_length_406_cov_10.611860_g39437_i0forward_frame_3 - 0.0019 18.3 0.5 0.0075 16.4 0.2 1.9 2 0 0 2 2 2 1 Putative lactococcus lactis phage r1t holin HMMR_C PF15908.5 NODE_47274_length_406_cov_58.272237_g39431_i0forward_frame_2 - 0.19 12.0 2.5 0.31 11.3 2.5 1.3 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal SeqA_N PF17206.3 NODE_47271_length_406_cov_68.509434_g39428_i0reverse_frame_2 - 0.23 10.8 0.1 0.53 9.6 0.0 1.6 2 0 0 2 2 2 0 SeqA protein N-terminal domain LuxC PF05893.14 NODE_47269_length_406_cov_76.045822_g39426_i0reverse_frame_3 - 0.018 14.1 0.0 0.024 13.7 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) HTH_26 PF13443.6 NODE_47269_length_406_cov_76.045822_g39426_i0forward_frame_3 - 0.068 13.6 1.9 7.1 7.1 0.8 2.4 1 1 1 2 2 2 0 Cro/C1-type HTH DNA-binding domain Ins134_P3_kin PF05770.11 NODE_47269_length_406_cov_76.045822_g39426_i0forward_frame_3 - 0.11 12.0 0.3 0.12 11.8 0.3 1.0 1 0 0 1 1 1 0 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain eIF_4EBP PF05456.11 NODE_47266_length_406_cov_78.377358_g38284_i1reverse_frame_3 - 0.78 9.7 3.9 1.4 8.8 0.1 2.2 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Ank_4 PF13637.6 NODE_47266_length_406_cov_78.377358_g38284_i1reverse_frame_2 - 7.9e-10 39.1 0.0 6.1e-06 26.7 0.0 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_47266_length_406_cov_78.377358_g38284_i1reverse_frame_2 - 2.9e-09 37.4 0.0 4.8e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_47266_length_406_cov_78.377358_g38284_i1reverse_frame_2 - 3.9e-09 36.6 0.0 6.7e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_47266_length_406_cov_78.377358_g38284_i1reverse_frame_2 - 3e-06 27.1 0.0 0.00094 19.5 0.0 2.9 4 0 0 4 4 4 1 Ankyrin repeat Ank PF00023.30 NODE_47266_length_406_cov_78.377358_g38284_i1reverse_frame_2 - 5.6e-06 26.6 0.0 0.00046 20.5 0.0 2.6 3 1 0 3 3 3 1 Ankyrin repeat CAF-1_p60_C PF15512.6 NODE_47266_length_406_cov_78.377358_g38284_i1forward_frame_2 - 1 9.8 4.3 1.6 9.2 4.3 1.4 1 1 0 1 1 1 0 Chromatin assembly factor complex 1 subunit p60, C-terminal RF-1 PF00472.20 NODE_47262_length_406_cov_92.396226_g39420_i0forward_frame_3 - 5.3e-16 58.6 0.2 7.1e-16 58.2 0.2 1.2 1 0 0 1 1 1 1 RF-1 domain Kelch_4 PF13418.6 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 1e-08 35.1 1.8 0.00017 21.5 0.1 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 3.3e-08 33.3 0.7 0.0027 17.7 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 2.2e-07 31.0 0.7 4.6e-05 23.6 0.1 2.6 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 3.5e-07 30.0 0.6 0.0008 19.3 0.0 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 1.5e-06 28.3 1.0 0.0016 18.7 0.2 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 NODE_47260_length_406_cov_97.064690_g39418_i0reverse_frame_3 - 5.9e-05 22.6 0.4 0.0029 17.2 0.1 2.3 2 1 0 2 2 2 1 Kelch motif MORN PF02493.20 NODE_47255_length_406_cov_109.835580_g39413_i0forward_frame_3 - 1.2e-30 103.5 28.7 3e-09 36.2 0.3 5.4 5 0 0 5 5 5 5 MORN repeat DUF983 PF06170.12 NODE_47254_length_406_cov_110.285714_g39412_i0reverse_frame_3 - 2.7 8.5 9.1 7.5 7.0 2.5 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF983) DnaJ_C PF01556.18 NODE_47254_length_406_cov_110.285714_g39412_i0forward_frame_3 - 1.3e-27 96.7 0.2 1.5e-27 96.5 0.2 1.0 1 0 0 1 1 1 1 DnaJ C terminal domain HTH_16 PF12645.7 NODE_47254_length_406_cov_110.285714_g39412_i0forward_frame_3 - 0.022 14.8 0.5 0.13 12.3 0.0 2.2 2 1 0 2 2 2 0 Helix-turn-helix domain DYW_deaminase PF14432.6 NODE_47253_length_406_cov_110.908356_g39411_i0reverse_frame_2 - 2.1e-07 30.9 0.3 3.4e-07 30.2 0.3 1.3 1 0 0 1 1 1 1 DYW family of nucleic acid deaminases DUF3586 PF12131.8 NODE_47253_length_406_cov_110.908356_g39411_i0reverse_frame_2 - 2.1 8.6 8.3 0.41 10.9 4.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3586) DUF4537 PF15057.6 NODE_47252_length_406_cov_114.253369_g39410_i0forward_frame_3 - 0.13 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4537) DUF1631 PF07793.11 NODE_47249_length_406_cov_133.892183_g39408_i0reverse_frame_2 - 0.023 13.1 7.5 0.028 12.9 7.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) TetR_C_11 PF16859.5 NODE_47249_length_406_cov_133.892183_g39408_i0reverse_frame_2 - 0.078 13.3 3.2 0.091 13.1 2.1 1.6 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_28 PF17937.1 NODE_47249_length_406_cov_133.892183_g39408_i0reverse_frame_2 - 0.087 13.3 4.9 0.16 12.4 4.9 1.6 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Mobilization_B PF17511.2 NODE_47249_length_406_cov_133.892183_g39408_i0forward_frame_2 - 0.14 12.5 0.4 0.16 12.3 0.4 1.2 1 0 0 1 1 1 0 Mobilization protein B VASP_tetra PF08776.11 NODE_47248_length_406_cov_136.380054_g39407_i0forward_frame_3 - 0.31 10.7 8.6 3.3 7.4 1.2 2.3 2 0 0 2 2 2 0 VASP tetramerisation domain Anti-TRAP PF15777.5 NODE_47248_length_406_cov_136.380054_g39407_i0forward_frame_2 - 1.9 8.5 7.2 11 6.1 2.3 2.3 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein UPF0182 PF03699.13 NODE_47241_length_406_cov_204.331536_g39400_i0forward_frame_2 - 0.24 9.5 10.6 0.27 9.3 10.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) DUF681 PF05080.12 NODE_47225_length_407_cov_1.803763_g39387_i0reverse_frame_2 - 0.019 15.6 0.7 0.032 14.9 0.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF681) PCI PF01399.27 NODE_47223_length_407_cov_1.854839_g39385_i0reverse_frame_2 - 0.52 10.8 4.0 0.98 10.0 1.0 2.0 2 0 0 2 2 2 0 PCI domain EFP_N PF08207.12 NODE_47222_length_407_cov_1.884409_g39384_i0forward_frame_2 - 0.12 12.5 0.5 0.19 11.7 0.5 1.3 1 0 0 1 1 1 0 Elongation factor P (EF-P) KOW-like domain Diphthamide_syn PF01866.17 NODE_47221_length_407_cov_1.935484_g39383_i0reverse_frame_2 - 3.7e-28 98.9 1.6 4.4e-28 98.6 1.6 1.1 1 0 0 1 1 1 1 Putative diphthamide synthesis protein TcA_RBD PF18518.1 NODE_47214_length_407_cov_2.454301_g39376_i0reverse_frame_2 - 0.058 13.7 0.2 0.071 13.4 0.2 1.1 1 0 0 1 1 1 0 TcA receptor binding domain XRN1_DBM PF18245.1 NODE_47214_length_407_cov_2.454301_g39376_i0forward_frame_2 - 3.5 7.7 6.8 0.44 10.6 2.8 1.5 2 0 0 2 2 2 0 5-3 exonuclease XRN1 DCP1-binding motif Virul_fac_BrkB PF03631.15 NODE_47207_length_407_cov_2.973118_g39369_i0forward_frame_3 - 4.4e-05 23.2 0.7 5.4e-05 22.9 0.7 1.1 1 0 0 1 1 1 1 Virulence factor BrkB DnaJ PF00226.31 NODE_47206_length_407_cov_3.000000_g39368_i0reverse_frame_3 - 0.0017 18.4 0.0 0.0027 17.8 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain CEP209_CC5 PF16574.5 NODE_47205_length_407_cov_3.040323_g39367_i0forward_frame_2 - 0.015 15.4 0.5 0.026 14.7 0.2 1.5 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 DUF1896 PF08989.10 NODE_47205_length_407_cov_3.040323_g39367_i0forward_frame_2 - 0.09 12.9 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1896) CAV_VP3 PF04771.12 NODE_47202_length_407_cov_3.223118_g39364_i0reverse_frame_3 - 0.04 14.1 0.1 0.064 13.4 0.1 1.4 1 1 0 1 1 1 0 Chicken anaemia virus VP-3 protein VESA1_N PF12785.7 NODE_47202_length_407_cov_3.223118_g39364_i0forward_frame_3 - 3.2 6.6 12.3 3.6 6.4 12.3 1.1 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Helicase_C_2 PF13307.6 NODE_47198_length_407_cov_25.569892_g39360_i0reverse_frame_3 - 1.9e-06 28.2 0.0 2.7e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain HBB PF06777.11 NODE_47198_length_407_cov_25.569892_g39360_i0reverse_frame_3 - 0.0037 17.0 0.0 0.0051 16.5 0.0 1.2 1 0 0 1 1 1 1 Helical and beta-bridge domain MRAP PF15183.6 NODE_47195_length_407_cov_56.930108_g39357_i0forward_frame_3 - 0.11 12.4 0.3 0.23 11.4 0.3 1.6 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Vezatin PF12632.7 NODE_47195_length_407_cov_56.930108_g39357_i0forward_frame_2 - 0.12 11.7 2.4 0.16 11.4 2.4 1.3 1 1 0 1 1 1 0 Mysoin-binding motif of peroxisomes Cadherin_tail PF15974.5 NODE_47188_length_407_cov_71.153226_g39350_i0forward_frame_3 - 0.067 13.5 0.8 0.1 12.9 0.7 1.4 1 1 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region EcsB PF05975.12 NODE_47187_length_407_cov_75.260753_g39349_i0forward_frame_2 - 0.011 14.6 1.5 0.015 14.2 1.5 1.2 1 0 0 1 1 1 0 Bacterial ABC transporter protein EcsB DUF3644 PF12358.8 NODE_47187_length_407_cov_75.260753_g39349_i0forward_frame_2 - 0.021 15.3 1.1 0.039 14.4 1.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3644) DUF4223 PF13978.6 NODE_47187_length_407_cov_75.260753_g39349_i0forward_frame_2 - 0.05 13.6 0.4 0.096 12.7 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4223) DUF3275 PF11679.8 NODE_47181_length_407_cov_86.069892_g39344_i0reverse_frame_3 - 9.6 6.1 8.2 9.9 6.1 7.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3275) Tad_C PF09977.9 NODE_47181_length_407_cov_86.069892_g39344_i0forward_frame_2 - 0.0035 18.5 0.3 0.0035 18.5 0.3 1.4 2 0 0 2 2 2 1 Putative Tad-like Flp pilus-assembly VOMI PF03762.17 NODE_47181_length_407_cov_86.069892_g39344_i0forward_frame_2 - 0.057 13.5 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Vitelline membrane outer layer protein I (VOMI) LmjF365940-deam PF14421.6 NODE_47181_length_407_cov_86.069892_g39344_i0forward_frame_2 - 0.29 10.7 2.9 0.33 10.5 2.9 1.1 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases X PF00739.19 NODE_47179_length_407_cov_87.564516_g39342_i0reverse_frame_3 - 0.27 11.3 6.0 0.42 10.8 6.0 1.3 1 0 0 1 1 1 0 Trans-activation protein X Ribosomal_S3_C PF00189.20 NODE_47179_length_407_cov_87.564516_g39342_i0forward_frame_3 - 2.2e-14 53.7 1.4 2.2e-14 53.7 1.4 1.6 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain NapB PF03892.14 NODE_47172_length_407_cov_158.973118_g39335_i0reverse_frame_3 - 0.012 15.6 0.6 0.021 14.8 0.6 1.4 1 0 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) DUF2062 PF09835.9 NODE_47169_length_407_cov_170.951613_g39332_i0reverse_frame_2 - 0.0078 16.1 0.4 0.0094 15.8 0.4 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) Clat_adaptor_s PF01217.20 NODE_47168_length_407_cov_174.473118_g39331_i0forward_frame_2 - 6.9e-28 97.4 2.4 8.9e-28 97.0 2.4 1.1 1 0 0 1 1 1 1 Clathrin adaptor complex small chain UBX PF00789.20 NODE_47162_length_407_cov_215.467742_g39325_i0reverse_frame_3 - 0.024 14.9 0.0 0.033 14.4 0.0 1.2 1 0 0 1 1 1 0 UBX domain Defensin_2 PF01097.18 NODE_47162_length_407_cov_215.467742_g39325_i0reverse_frame_2 - 9.3 6.3 11.7 14 5.8 2.1 2.8 2 0 0 2 2 2 0 Arthropod defensin Toxin_35 PF10530.9 NODE_47162_length_407_cov_215.467742_g39325_i0forward_frame_2 - 0.05 13.6 3.6 0.081 12.9 3.6 1.3 1 0 0 1 1 1 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold HEPN_DZIP3 PF18738.1 NODE_47150_length_408_cov_1.455764_g39315_i0forward_frame_2 - 0.5 10.1 5.2 0.2 11.4 0.6 2.1 1 1 1 2 2 2 0 DZIP3/ hRUL138-like HEPN Baculo_E66 PF04850.12 NODE_47148_length_408_cov_1.973190_g39313_i0reverse_frame_2 - 0.082 11.7 0.3 0.095 11.5 0.3 1.1 1 0 0 1 1 1 0 Baculovirus E66 occlusion-derived virus envelope protein LsmAD PF06741.13 NODE_47147_length_408_cov_1.989276_g39312_i0forward_frame_3 - 0.0027 18.2 0.5 0.004 17.7 0.5 1.3 1 0 0 1 1 1 1 LsmAD domain DUF2268 PF10026.9 NODE_47146_length_408_cov_2.083110_g39311_i0forward_frame_2 - 0.00019 21.1 0.3 0.00021 20.9 0.3 1.2 1 0 0 1 1 1 1 Predicted Zn-dependent protease (DUF2268) CAAP1 PF15335.6 NODE_47144_length_408_cov_2.187668_g39309_i0forward_frame_2 - 0.065 13.8 2.6 0.1 13.2 0.9 2.1 1 1 1 2 2 2 0 Caspase activity and apoptosis inhibitor 1 Reoviridae_Vp9 PF08978.10 NODE_47142_length_408_cov_2.257373_g39307_i0forward_frame_2 - 0.26 10.4 2.0 0.34 10.1 2.0 1.2 1 0 0 1 1 1 0 Reoviridae VP9 TRIQK PF15168.6 NODE_47138_length_408_cov_2.554960_g39303_i0reverse_frame_3 - 0.061 13.2 0.1 0.061 13.2 0.1 1.7 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family NAF PF03822.14 NODE_47138_length_408_cov_2.554960_g39303_i0forward_frame_3 - 0.07 13.3 0.6 0.15 12.3 0.6 1.5 1 0 0 1 1 1 0 NAF domain Thioredoxin_8 PF13905.6 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 1.8e-12 47.4 0.1 2.4e-12 47.0 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.21 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 3.3e-09 36.7 0.0 4.3e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin PF00085.20 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 1.5e-05 24.9 0.1 0.00022 21.1 0.1 2.0 1 1 1 2 2 2 1 Thioredoxin Redoxin PF08534.10 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 2.6e-05 24.0 0.0 3.1e-05 23.7 0.0 1.0 1 0 0 1 1 1 1 Redoxin Thioredoxin_2 PF13098.6 NODE_47134_length_408_cov_4.345845_g39299_i0forward_frame_2 - 0.065 13.7 0.1 0.15 12.5 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like domain Cas_Csn2 PF09711.10 NODE_47131_length_408_cov_5.788204_g39296_i0reverse_frame_3 - 0.0021 17.8 0.5 0.0024 17.6 0.5 1.2 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csn2) Arteri_Gl PF00951.18 NODE_47131_length_408_cov_5.788204_g39296_i0forward_frame_2 - 0.1 12.4 4.9 0.14 12.0 4.9 1.3 1 1 0 1 1 1 0 Arterivirus GL envelope glycoprotein Baculo_11_kDa PF06143.11 NODE_47131_length_408_cov_5.788204_g39296_i0forward_frame_2 - 1.9 8.1 12.3 0.079 12.5 6.5 1.6 2 0 0 2 2 2 0 Baculovirus 11 kDa family A_deaminase PF00962.22 NODE_47129_length_408_cov_33.962466_g39294_i0forward_frame_2 - 1.5e-19 70.5 0.0 1.6e-19 70.4 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase Ndc1_Nup PF09531.10 NODE_47125_length_408_cov_53.343164_g39290_i0reverse_frame_3 - 1.8 7.2 10.2 2.1 7.0 10.2 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup ThrE PF06738.12 NODE_47125_length_408_cov_53.343164_g39290_i0reverse_frame_2 - 0.28 10.5 2.1 0.33 10.3 2.1 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter Yae1_N PF09811.9 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.0049 16.5 25.3 0.71 9.6 13.2 4.0 3 1 0 3 3 3 2 Essential protein Yae1, N terminal Presenilin PF01080.17 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.058 12.1 5.7 0.059 12.1 5.7 1.1 1 0 0 1 1 1 0 Presenilin DUF1467 PF07330.12 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.064 13.2 0.3 0.5 10.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1467) Zip PF02535.22 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.37 9.9 1.5 0.42 9.8 1.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter NPR3 PF03666.13 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 0.57 8.9 16.5 0.67 8.7 16.5 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 V_ATPase_I PF01496.19 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_3 - 2.9 5.7 3.9 3.1 5.6 3.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Yae1_N PF09811.9 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_2 - 0.021 14.5 29.5 0.45 10.3 0.6 5.0 2 1 0 3 3 3 0 Essential protein Yae1, N terminal DUF2201_N PF13203.6 NODE_47125_length_408_cov_53.343164_g39290_i0forward_frame_2 - 0.6 9.7 7.0 0.65 9.5 7.0 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain BSD PF03909.17 NODE_47124_length_408_cov_60.069705_g39289_i0reverse_frame_2 - 0.047 13.7 0.1 0.14 12.2 0.0 1.8 2 1 0 2 2 2 0 BSD domain CDC24_OB3 PF17244.2 NODE_47123_length_408_cov_62.903485_g39288_i0forward_frame_3 - 0.031 14.0 1.8 0.04 13.6 0.5 1.6 1 1 1 2 2 2 0 Cell division control protein 24, OB domain 3 LEF-9 PF05094.12 NODE_47115_length_408_cov_82.252011_g39280_i0reverse_frame_3 - 0.022 13.3 0.1 0.026 13.1 0.1 1.1 1 0 0 1 1 1 0 Late expression factor 9 (LEF-9) Porin_6 PF16939.5 NODE_47114_length_408_cov_82.356568_g39279_i0forward_frame_2 - 0.19 10.8 2.9 0.32 10.0 3.0 1.4 1 1 0 1 1 1 0 Putative porin Fer4_16 PF13484.6 NODE_47110_length_408_cov_101.426273_g39275_i0reverse_frame_2 - 0.044 14.7 5.4 0.098 13.6 5.4 1.6 1 0 0 1 1 1 0 4Fe-4S double cluster binding domain KH_1 PF00013.29 NODE_47109_length_408_cov_110.040214_g39274_i0forward_frame_3 - 0.00026 20.8 0.0 0.00039 20.2 0.0 1.3 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 NODE_47109_length_408_cov_110.040214_g39274_i0forward_frame_3 - 0.078 12.8 0.4 0.14 12.0 0.4 1.4 1 0 0 1 1 1 0 KH domain DUF2809 PF10990.8 NODE_47108_length_408_cov_111.501340_g39273_i0reverse_frame_2 - 0.034 14.8 0.1 0.054 14.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2809) ING PF12998.7 NODE_47108_length_408_cov_111.501340_g39273_i0forward_frame_3 - 0.045 14.3 0.1 0.11 13.1 0.1 1.6 2 0 0 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding P5-ATPase PF12409.8 NODE_47106_length_408_cov_116.144772_g39271_i0reverse_frame_3 - 0.00013 22.1 2.0 0.00013 22.1 2.0 1.8 1 1 1 2 2 2 1 P5-type ATPase cation transporter Sec62 PF03839.16 NODE_47106_length_408_cov_116.144772_g39271_i0reverse_frame_3 - 0.0033 17.0 0.0 0.0039 16.7 0.0 1.1 1 0 0 1 1 1 1 Translocation protein Sec62 GET2 PF08690.10 NODE_47106_length_408_cov_116.144772_g39271_i0reverse_frame_3 - 0.015 15.0 0.0 0.016 14.9 0.0 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 MyTH4 PF00784.17 NODE_47103_length_408_cov_118.546917_g39268_i0forward_frame_3 - 0.081 13.4 4.4 5.9 7.4 0.2 2.4 2 1 0 2 2 2 0 MyTH4 domain Mito_morph_reg PF14972.6 NODE_47103_length_408_cov_118.546917_g39268_i0forward_frame_3 - 0.11 12.1 2.2 0.17 11.5 2.2 1.4 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator DEFB136 PF17333.2 NODE_47098_length_408_cov_131.477212_g39263_i0reverse_frame_3 - 0.035 14.1 2.0 0.071 13.1 2.0 1.5 1 0 0 1 1 1 0 Beta defensin 136 WBS_methylT PF12589.8 NODE_47096_length_408_cov_135.120643_g39261_i0forward_frame_3 - 0.48 11.2 4.8 0.84 10.4 4.8 1.4 1 0 0 1 1 1 0 Methyltransferase involved in Williams-Beuren syndrome Band_3_cyto PF07565.13 NODE_47096_length_408_cov_135.120643_g39261_i0forward_frame_2 - 0.098 12.4 0.2 0.12 12.2 0.2 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain CwfJ_C_1 PF04677.15 NODE_47094_length_408_cov_138.013405_g39259_i0reverse_frame_2 - 0.096 12.6 0.8 0.12 12.3 0.7 1.3 1 1 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 Fer4_8 PF13183.6 NODE_47093_length_408_cov_146.769437_g39258_i0reverse_frame_2 - 4.3 7.9 8.8 0.19 12.2 1.2 2.2 2 1 0 2 2 2 0 4Fe-4S dicluster domain SKI PF01202.22 NODE_47085_length_408_cov_222.691689_g39250_i0reverse_frame_3 - 0.054 13.6 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Shikimate kinase DUF1262 PF06880.11 NODE_47084_length_408_cov_242.613941_g39249_i0forward_frame_2 - 0.11 13.0 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1262) Vps26 PF03643.15 NODE_47078_length_408_cov_472.683646_g39243_i0reverse_frame_3 - 5.8e-51 173.1 0.6 6.7e-51 172.9 0.6 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 26 Ribosomal_L39 PF00832.20 NODE_47078_length_408_cov_472.683646_g39243_i0reverse_frame_2 - 0.09 12.4 2.6 3.1 7.5 1.1 2.6 2 0 0 2 2 2 0 Ribosomal L39 protein F-box-like PF12937.7 NODE_47073_length_408_cov_1772.174263_g39238_i0reverse_frame_3 - 5 7.1 6.7 0.31 11.0 0.5 2.0 1 1 1 2 2 2 0 F-box-like Myticin-prepro PF10690.9 NODE_47073_length_408_cov_1772.174263_g39238_i0forward_frame_3 - 1.9 8.8 7.8 0.46 10.8 4.6 1.5 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel DUF805 PF05656.14 NODE_47070_length_408_cov_31342.241287_g39235_i0forward_frame_2 - 0.012 16.0 2.2 0.014 15.8 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF805) Popeye PF04831.13 NODE_47070_length_408_cov_31342.241287_g39235_i0forward_frame_2 - 0.11 12.6 4.1 0.14 12.3 4.1 1.1 1 0 0 1 1 1 0 Popeye protein conserved region F-box PF00646.33 ORF99617 - 1.2 9.1 4.9 0.52 10.3 0.9 2.3 2 0 0 2 2 2 0 F-box domain DUF2828 PF11443.8 ORF99147 - 0.011 13.9 0.1 0.011 13.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) DUF4051 PF13260.6 ORF97947 - 1.7 8.4 3.9 7.3 6.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) HMG_box PF00505.19 ORF94150 - 1.1e-11 44.9 4.0 1.1e-11 44.9 4.0 1.8 1 1 1 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF94150 - 4.3e-07 30.4 3.0 4.3e-07 30.4 3.0 1.8 1 1 0 1 1 1 1 HMG-box domain DUF724 PF05266.14 ORF93665 - 0.069 13.0 7.1 0.022 14.6 2.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Angiomotin_C PF12240.8 ORF93665 - 0.26 10.8 5.3 0.19 11.3 2.5 2.0 1 1 1 2 2 2 0 Angiomotin C terminal TGF_beta_GS PF08515.12 ORF9333 - 0.085 12.4 0.2 0.16 11.5 0.2 1.4 1 0 0 1 1 1 0 Transforming growth factor beta type I GS-motif Erp_C PF06780.11 ORF9265 - 0.37 10.8 6.2 0.27 11.2 0.3 2.1 1 1 1 2 2 2 0 Erp protein C-terminus DUF1340 PF07067.11 ORF91923 - 0.0038 16.6 0.8 0.0042 16.5 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1340) TERB2 PF15101.6 ORF91923 - 0.22 11.6 4.0 0.2 11.7 3.2 1.4 1 1 0 1 1 1 0 Telomere-associated protein TERB2 FlaC_arch PF05377.11 ORF91923 - 1.3 9.5 9.1 0.58 10.6 1.3 3.2 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF16 PF01519.16 ORF91923 - 6.5 7.3 12.1 21 5.7 12.1 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 Syntaxin PF00804.25 ORF88851 - 0.0011 18.7 0.4 0.0015 18.3 0.4 1.2 1 0 0 1 1 1 1 Syntaxin BLOC1_2 PF10046.9 ORF88851 - 0.0025 18.1 3.0 0.005 17.1 3.0 1.4 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 NPV_P10 PF05531.12 ORF88851 - 0.0061 17.0 2.8 0.062 13.8 2.2 2.1 2 0 0 2 2 2 1 Nucleopolyhedrovirus P10 protein DASH_Dad3 PF08656.10 ORF88851 - 0.011 15.8 0.4 0.023 14.7 0.4 1.6 1 0 0 1 1 1 0 DASH complex subunit Dad3 DUF4735 PF15882.5 ORF88851 - 0.02 14.3 1.2 0.029 13.8 1.0 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4735) IQCJ-SCHIP1 PF15157.6 ORF88851 - 0.026 14.4 2.1 2.8 7.8 0.1 2.1 1 1 1 2 2 2 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif DUF2730 PF10805.8 ORF88851 - 0.028 14.5 0.5 0.1 12.7 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) DUF4279 PF14106.6 ORF88851 - 0.095 12.9 0.5 3 8.1 0.2 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4279) Matrilin_ccoil PF10393.9 ORF88851 - 0.11 12.4 0.8 0.52 10.2 0.3 2.2 1 1 1 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin Latarcin PF10279.9 ORF88851 - 0.17 12.3 2.1 5.5 7.5 2.1 2.5 1 1 0 1 1 1 0 Latarcin precursor DUF4131 PF13567.6 ORF8820 - 4.2 7.0 9.0 6.5 6.4 9.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Keratin_B2_2 PF13885.6 ORF87926 - 1.1 9.2 6.3 4.9 7.2 0.5 2.2 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein V-SNARE_C PF12352.8 ORF87275 - 0.00026 21.2 2.9 0.00051 20.3 2.9 1.4 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 ORF87275 - 0.0019 18.0 1.6 0.0031 17.4 0.3 1.9 1 1 1 2 2 2 1 Sec20 DUF2540 PF10802.8 ORF87275 - 0.011 15.8 1.1 0.011 15.8 1.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2540) Colicin_im PF03857.13 ORF87275 - 0.013 15.4 0.9 0.02 14.8 0.9 1.2 1 0 0 1 1 1 0 Colicin immunity protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks192.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks192.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks192.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks192.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DnaB_C PF03796.15 ORF84091 - 0.061 12.6 0.5 0.11 11.8 0.5 1.5 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain PH PF00169.29 ORF82619 - 2.5e-14 53.7 3.6 2.9e-14 53.4 3.6 1.1 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF82619 - 9.8e-05 22.7 5.6 0.00014 22.2 5.6 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain Lipoprotein_22 PF17294.2 ORF82619 - 0.1 12.3 0.2 0.21 11.2 0.1 1.6 1 1 0 1 1 1 0 Uncharacterised lipoprotein family DUF2572 PF10833.8 ORF82292 - 0.054 13.2 1.4 0.07 12.9 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2572) VitD-bind_III PF09164.10 ORF8163 - 0.0062 16.5 0.2 0.0062 16.5 0.2 2.0 2 0 0 2 2 2 1 Vitamin D binding protein, domain III SHOCT PF09851.9 ORF80577 - 3.6e-08 32.9 0.3 9.5e-08 31.6 0.3 1.8 1 0 0 1 1 1 1 Short C-terminal domain CSTF2_hinge PF14327.6 ORF80526 - 1.2e-06 28.9 3.5 1.6e-06 28.4 0.1 2.5 2 1 0 2 2 2 1 Hinge domain of cleavage stimulation factor subunit 2 CSTF_C PF14304.6 ORF80526 - 0.0017 17.9 3.9 0.0036 16.9 3.9 1.6 1 0 0 1 1 1 1 Transcription termination and cleavage factor C-terminal Rrp40_N PF18311.1 ORF80526 - 0.016 15.1 0.3 0.033 14.1 0.3 1.6 1 0 0 1 1 1 0 Exosome complex exonuclease Rrp40 N-terminal domain TFIIE_beta PF02186.15 ORF80526 - 0.038 14.3 1.1 0.62 10.4 0.0 3.0 3 1 0 3 3 3 0 TFIIE beta subunit core domain RBM39linker PF15519.6 ORF80526 - 0.11 13.6 2.8 0.12 13.4 0.3 2.2 1 1 1 2 2 2 0 linker between RRM2 and RRM3 domains in RBM39 protein Tom5 PF10642.9 ORF80526 - 3.4 7.8 8.3 1 9.5 0.2 2.5 2 0 0 2 2 2 0 Mitochondrial import receptor subunit or translocase Ras PF00071.22 ORF79467 - 2.3e-14 53.3 0.0 2.5e-14 53.2 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF79467 - 3.6e-05 24.0 0.0 4.7e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF79467 - 0.00031 20.2 0.0 0.00035 20.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SelP_C PF04593.14 ORF77500 - 0.11 12.5 2.0 0.18 11.8 2.0 1.4 1 0 0 1 1 1 0 Selenoprotein P, C terminal region MqsA_antitoxin PF15731.5 ORF7578 - 0.1 12.7 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Cdc13_OB4_dimer PF18233.1 ORF755 - 1.3 9.2 3.0 0.82 9.8 0.3 1.8 2 0 0 2 2 2 0 Cdc13 OB4 dimerization domain NUDIX PF00293.28 ORF74474 - 3.3e-12 46.6 0.0 4.1e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain CLIP_1 PF18322.1 ORF74474 - 0.096 12.8 0.2 0.096 12.8 0.2 2.2 3 0 0 3 3 3 0 Serine protease Clip domain PPAF-2 DUF2572 PF10833.8 ORF74080 - 0.054 13.2 1.4 0.07 12.9 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2572) TPK_B1_binding PF04265.14 ORF73614 - 0.04 13.6 0.5 0.63 9.8 0.1 2.2 2 0 0 2 2 2 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Noelin-1 PF12308.8 ORF73614 - 0.42 10.6 5.3 0.75 9.8 2.0 2.1 2 0 0 2 2 2 0 Neurogenesis glycoprotein AIP3 PF03915.13 ORF72847 - 0.024 13.8 0.1 0.025 13.7 0.1 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 UPF0172 PF03665.13 ORF72847 - 0.043 13.9 0.4 0.051 13.6 0.4 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) JAMP PF05571.12 ORF70538 - 0.018 14.7 0.9 0.018 14.7 0.9 1.6 1 1 0 1 1 1 0 JNK1/MAPK8-associated membrane protein Tetraspanin PF00335.20 ORF68893 - 0.022 14.5 0.6 0.026 14.3 0.6 1.3 1 0 0 1 1 1 0 Tetraspanin family DUF3584 PF12128.8 ORF67983 - 0.00089 16.9 3.1 0.00095 16.8 3.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) CHZ PF09649.10 ORF67389 - 1.9 8.0 4.6 3.4 7.2 4.6 1.4 1 0 0 1 1 1 0 Histone chaperone domain CHZ Rhodanese PF00581.20 ORF67354 - 2.6e-05 24.7 0.0 3.2e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain MAAL_N PF05034.13 ORF67354 - 0.076 12.6 0.0 0.089 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus LAT2 PF15703.5 ORF66130 - 0.18 11.7 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells family member 2 DUF1499 PF07386.11 ORF66091 - 0.0069 16.9 0.0 0.0083 16.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) U-box PF04564.15 ORF65724 - 2.5e-17 62.8 0.6 7.4e-17 61.3 0.1 1.8 2 0 0 2 2 2 1 U-box domain UIM PF02809.20 ORF65724 - 0.00013 21.6 0.5 0.00013 21.6 0.5 2.2 2 0 0 2 2 2 1 Ubiquitin interaction motif HEPN_Cthe2314 PF18730.1 ORF64789 - 0.0013 18.8 2.6 0.0016 18.5 2.6 1.1 1 0 0 1 1 1 1 Cthe_2314-like HEPN DUF1129 PF06570.11 ORF64789 - 0.07 12.6 0.1 0.086 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Trm112p PF03966.16 ORF63829 - 5e-12 46.2 0.0 6.3e-11 42.7 0.0 2.1 1 1 0 1 1 1 1 Trm112p-like protein Pkinase PF00069.25 ORF63732 - 1.2e-14 54.3 0.0 1.4e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63732 - 0.0017 17.7 0.0 0.002 17.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF63732 - 0.16 11.3 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like DUF2357 PF09823.9 ORF62413 - 0.006 15.9 1.4 0.0072 15.6 1.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2357) TcdB_N PF12918.7 ORF62413 - 5.8 7.3 12.0 7.6 6.9 0.7 2.9 3 1 0 3 3 3 0 TcdB toxin N-terminal helical domain CRAL_TRIO PF00650.20 ORF5959 - 3.2e-06 27.0 0.0 4.1e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain Sugar_tr PF00083.24 ORF59308 - 1.4e-13 50.6 8.3 1.7e-13 50.3 8.3 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF59308 - 1.3e-06 27.6 2.4 1.9e-06 27.1 2.4 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily Pox_EPC_I2-L1 PF12575.8 ORF59308 - 0.14 12.4 0.0 0.14 12.4 0.0 2.3 2 1 1 3 3 3 0 Poxvirus entry protein complex L1 and I2 DUF5616 PF18481.1 ORF58916 - 0.027 14.8 0.3 0.039 14.3 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5616) DUF4208 PF13907.6 ORF58916 - 0.16 12.4 2.9 0.29 11.6 1.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4208) Ribosomal_L26 PF16906.5 ORF58286 - 2.1e-31 108.2 0.9 2.4e-31 108.0 0.9 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 ORF58286 - 9.5e-06 25.4 0.3 2.2e-05 24.2 0.3 1.6 1 0 0 1 1 1 1 KOW motif DUF2572 PF10833.8 ORF57744 - 0.054 13.2 1.4 0.07 12.9 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2572) Adeno_IVa2 PF02456.15 ORF57653 - 0.052 12.3 0.1 0.077 11.8 0.1 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein Axin_b-cat_bind PF08833.10 ORF54637 - 0.0036 17.4 1.7 0.0036 17.4 1.7 3.0 3 1 1 4 4 4 1 Axin beta-catenin binding domain DUF2619 PF10942.8 ORF5342 - 0.11 12.6 0.3 0.47 10.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2619) zf-RING_11 PF17123.5 ORF5342 - 0.13 12.0 2.0 0.26 11.0 2.0 1.6 1 0 0 1 1 1 0 RING-like zinc finger DUF4787 PF16029.5 ORF51416 - 1.6 8.9 4.3 20 5.4 0.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4787) CnrY PF17524.2 ORF50751 - 0.013 15.7 1.1 0.023 14.9 1.1 1.5 1 0 0 1 1 1 0 Anti-sigma factor CnrY YdaS_antitoxin PF15943.5 ORF50707 - 0.0018 18.1 0.1 0.0028 17.5 0.1 1.3 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT AAA_11 PF13086.6 ORF4998 - 0.04 13.7 3.9 0.047 13.5 3.9 1.0 1 0 0 1 1 1 0 AAA domain PIN_5 PF08745.11 ORF4998 - 0.11 11.9 0.2 0.12 11.7 0.2 1.1 1 0 0 1 1 1 0 PINc domain ribonuclease DUF2357 PF09823.9 ORF49757 - 0.006 15.9 1.4 0.0072 15.6 1.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2357) TcdB_N PF12918.7 ORF49757 - 5.8 7.3 12.0 7.6 6.9 0.7 2.9 3 1 0 3 3 3 0 TcdB toxin N-terminal helical domain Allatostatin PF05953.12 ORF49571 - 1.2 9.9 0.1 1.2 9.9 0.1 3.1 4 0 0 4 4 4 0 Allatostatin DHHC PF01529.20 ORF4781 - 0.0012 18.9 8.0 0.0017 18.4 8.0 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase EamA PF00892.20 ORF4781 - 0.0065 16.6 3.3 0.0095 16.1 3.3 1.2 1 0 0 1 1 1 1 EamA-like transporter family Helicase_C PF00271.31 ORF46208 - 1.8e-18 66.9 0.0 2.4e-18 66.5 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Ribosomal_L37e PF01907.19 ORF46208 - 0.014 15.5 0.1 0.025 14.8 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L37e Ntox37 PF15535.6 ORF43068 - 0.17 12.4 0.0 0.25 11.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial toxin 37 DUF5438 PF17506.2 ORF42350 - 0.061 13.7 0.2 0.1 12.9 0.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5438) DUF3477 PF11963.8 ORF42350 - 0.1 11.8 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3477) DUF276 PF03434.13 ORF40851 - 0.25 10.5 0.0 0.27 10.4 0.0 1.0 1 0 0 1 1 1 0 DUF276 DZR PF12773.7 ORF40205 - 0.3 11.1 10.6 0.06 13.4 6.7 1.9 2 0 0 2 2 2 0 Double zinc ribbon HypA PF01155.19 ORF40205 - 3.1 7.8 8.2 1.2 9.2 5.5 1.8 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2403 PF10290.9 ORF39874 - 0.12 12.8 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 Glycine-rich protein domain (DUF2403) Metallothio_5 PF02067.15 ORF38484 - 0.059 13.5 3.8 0.059 13.5 3.8 2.4 1 1 1 2 2 2 0 Metallothionein family 5 Cytomega_TRL10 PF06084.11 ORF38484 - 0.081 12.9 5.7 0.11 12.5 5.7 1.1 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein NPV_P10 PF05531.12 ORF36861 - 0.05 14.1 1.1 0.05 14.1 1.1 1.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF402 PF04167.13 ORF36861 - 0.11 12.7 0.1 0.17 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF402) Ribosomal_S24e PF01282.19 ORF36528 - 3.2e-26 91.1 0.3 3.2e-26 91.1 0.3 2.0 1 1 1 2 2 2 1 Ribosomal protein S24e Herpes_UL87 PF03043.14 ORF35388 - 0.11 10.9 0.7 0.31 9.5 0.7 1.7 1 1 0 1 1 1 0 Herpesvirus UL87 family CCSMST1 PF15013.6 ORF32843 - 1.3 9.3 5.5 0.56 10.4 1.2 2.4 1 1 1 2 2 2 0 CCSMST1 family NinF PF05810.12 ORF31990 - 0.096 12.6 0.7 0.18 11.7 0.7 1.4 1 0 0 1 1 1 0 NinF protein Cupin_8 PF13621.6 ORF30518 - 4e-05 23.5 0.0 6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Cupin-like domain SNARE PF05739.19 ORF28467 - 0.034 14.1 0.2 0.062 13.3 0.2 1.4 1 0 0 1 1 1 0 SNARE domain CRAL_TRIO PF00650.20 ORF28467 - 0.09 12.5 0.1 0.2 11.3 0.0 1.6 2 0 0 2 2 2 0 CRAL/TRIO domain DUF5345 PF17280.2 ORF27552 - 0.077 13.0 0.0 2.2 8.3 0.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5345) Fungal_TACC PF12709.7 ORF27013 - 0.086 13.3 1.5 0.11 13.0 0.1 1.8 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Ion_trans_2 PF07885.16 ORF25956 - 5.1e-13 48.8 0.9 6.2e-13 48.5 0.9 1.1 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF25956 - 3.4e-09 36.3 0.0 4.1e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Ion transport protein DUF2353 PF09789.9 ORF25956 - 0.071 12.5 0.2 0.077 12.3 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) SUD-M PF11633.8 ORF25956 - 0.086 12.5 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Single-stranded poly(A) binding domain DUF1668 PF07893.13 ORF23666 - 0.011 15.1 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1668) YjbR PF04237.13 ORF23158 - 2.3e-18 66.5 0.0 3.2e-18 66.1 0.0 1.2 1 0 0 1 1 1 1 YjbR DUF5519 PF17648.1 ORF23158 - 0.013 15.4 0.1 0.019 14.9 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5519) Keratin_B2_2 PF13885.6 ORF19535 - 1.1 9.2 6.3 4.9 7.2 0.5 2.2 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein Glyoxalase PF00903.25 ORF19325 - 5.7e-24 84.7 0.0 6.6e-24 84.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF19325 - 2.3e-07 31.0 0.0 1.7e-06 28.3 0.0 1.9 1 1 1 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 ORF19325 - 8.8e-06 26.5 0.0 1.5e-05 25.7 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 ORF19325 - 0.0071 16.3 0.0 0.02 14.8 0.0 1.6 1 1 0 1 1 1 1 Glyoxalase-like domain CppA_N PF14506.6 ORF19325 - 0.02 14.9 0.0 0.039 14.0 0.0 1.5 1 1 0 1 1 1 0 CppA N-terminal RNA_lig_T4_1 PF09511.10 ORF19274 - 7.6e-05 22.7 1.1 9.3e-05 22.4 1.1 1.1 1 0 0 1 1 1 1 RNA ligase LRRFIP PF09738.9 ORF19274 - 0.023 14.2 4.9 0.045 13.2 0.4 2.0 1 1 1 2 2 2 0 LRRFIP family DUF1643 PF07799.12 ORF19274 - 0.024 14.8 0.0 0.029 14.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1643) MHCassoc_trimer PF08831.10 ORF19274 - 0.059 13.4 3.0 0.29 11.2 0.2 2.4 3 0 0 3 3 3 0 Class II MHC-associated invariant chain trimerisation domain Tweety PF04906.13 ORF19274 - 0.11 11.1 0.2 0.14 10.8 0.2 1.1 1 0 0 1 1 1 0 Tweety HTH_56 PF18662.1 ORF19274 - 0.13 12.3 3.4 0.27 11.3 3.3 1.7 1 1 0 1 1 1 0 Cch helix turn helix domain DUF1798 PF08807.10 ORF19274 - 0.35 11.0 5.1 0.52 10.5 0.8 2.6 2 1 1 3 3 3 0 Bacterial domain of unknown function (DUF1798) DHHC PF01529.20 ORF19143 - 0.0012 18.9 8.0 0.0017 18.4 8.0 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase EamA PF00892.20 ORF19143 - 0.0065 16.6 3.3 0.0095 16.1 3.3 1.2 1 0 0 1 1 1 1 EamA-like transporter family DUF2748 PF10871.8 ORF18601 - 0.075 11.6 2.2 0.077 11.6 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2748) Prok-RING_4 PF14447.6 ORF15421 - 0.03 14.2 1.3 0.03 14.2 1.3 2.0 2 1 0 2 2 2 0 Prokaryotic RING finger family 4 tRNA_bind PF01588.20 ORF15421 - 0.04 14.0 0.2 0.074 13.2 0.2 1.5 1 0 0 1 1 1 0 Putative tRNA binding domain Cofilin_ADF PF00241.20 ORF151888 - 4.1e-25 87.9 0.4 5.1e-25 87.6 0.4 1.0 1 0 0 1 1 1 1 Cofilin/tropomyosin-type actin-binding protein Peptidase_M35 PF02102.15 ORF151677 - 0.094 11.6 0.4 0.092 11.6 0.4 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family Aldo_ket_red PF00248.21 ORF151499 - 1.9e-17 63.4 0.0 2.2e-17 63.2 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family DUF2834 PF11196.8 ORF150873 - 0.023 15.0 1.4 0.032 14.6 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2834) SWIRM-assoc_2 PF16496.5 ORF150049 - 0.7 8.7 5.1 0.72 8.7 5.1 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal Peptidase_C14 PF00656.22 ORF149643 - 0.0038 17.2 0.0 0.051 13.5 0.0 1.9 2 0 0 2 2 2 2 Caspase domain Stc1 PF12898.7 ORF148850 - 0.0066 17.0 1.4 0.14 12.7 0.9 2.6 1 1 0 1 1 1 1 Stc1 domain Bowman-Birk_leg PF00228.20 ORF148850 - 0.088 13.2 13.0 0.19 12.2 0.3 3.5 3 0 0 3 3 3 0 Bowman-Birk serine protease inhibitor family SAM_Exu PF18609.1 ORF14717 - 0.043 13.9 1.3 0.043 13.9 1.3 2.1 2 1 0 2 2 2 0 Exuperantia SAM-like domain DUF445 PF04286.12 ORF14717 - 0.075 12.8 9.4 0.076 12.8 9.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF445) CEP209_CC5 PF16574.5 ORF14717 - 0.12 12.5 13.7 0.17 12.0 13.7 1.2 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 FAM117 PF15388.6 ORF14717 - 0.83 9.0 6.3 1 8.7 6.3 1.0 1 0 0 1 1 1 0 Protein Family FAM117 FKS1_dom1 PF14288.6 ORF14717 - 1.3 9.4 5.9 4.3 7.7 5.9 1.8 1 1 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 HIP1_clath_bdg PF16515.5 ORF14717 - 1.5 9.5 14.0 3.2 8.4 7.8 2.5 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 LMBR1 PF04791.16 ORF14717 - 5.2 5.9 10.8 5.8 5.7 10.8 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Pet100 PF09803.9 ORF14717 - 5.2 7.7 8.3 2.8 8.5 1.4 2.4 1 1 0 2 2 2 0 Pet100 YabA PF06156.13 ORF14717 - 6.7 7.4 15.7 0.21 12.2 3.6 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Peptidase_S49_N PF08496.10 ORF14717 - 7.6 6.6 12.9 35 4.4 12.8 1.9 1 1 0 1 1 1 0 Peptidase family S49 N-terminal DUF276 PF03434.13 ORF146981 - 0.25 10.5 0.0 0.27 10.4 0.0 1.0 1 0 0 1 1 1 0 DUF276 DUF5472 PF17566.2 ORF146813 - 0.072 13.1 0.6 0.16 11.9 0.6 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5472) DnaJ PF00226.31 ORF146535 - 4e-05 23.6 0.3 5.9e-05 23.1 0.3 1.2 1 0 0 1 1 1 1 DnaJ domain IclR PF01614.18 ORF144894 - 0.014 15.2 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial transcriptional regulator SLBP_RNA_bind PF15247.6 ORF144894 - 0.16 12.1 0.2 0.16 12.1 0.2 1.6 2 0 0 2 2 2 0 Histone RNA hairpin-binding protein RNA-binding domain GYF_2 PF14237.6 ORF144894 - 0.27 11.1 1.4 5.7 6.8 0.2 2.5 2 1 0 2 2 2 0 GYF domain 2 Abhydrolase_1 PF00561.20 ORF144374 - 0.007 16.0 0.0 0.0071 16.0 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold DAGK_prokar PF01219.19 ORF14425 - 0.11 12.3 0.2 0.41 10.5 0.0 1.9 2 0 0 2 2 2 0 Prokaryotic diacylglycerol kinase SPX PF03105.19 ORF144058 - 0.034 14.1 8.4 0.037 13.9 8.4 1.0 1 0 0 1 1 1 0 SPX domain DUF5521 PF17659.1 ORF144058 - 0.65 7.8 3.1 0.78 7.5 3.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5521) Apt1 PF10351.9 ORF144058 - 4 6.2 10.6 4.5 6.0 10.6 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Ank_2 PF12796.7 ORF141158 - 2.2e-07 31.3 0.2 6.9e-07 29.8 0.1 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF141158 - 2.8e-07 30.9 0.0 0.0033 18.0 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF141158 - 7.6e-05 22.8 0.9 0.28 11.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF141158 - 0.00078 19.7 0.2 0.008 16.5 0.1 2.5 1 1 1 2 2 2 1 Ankyrin repeats (many copies) SecY PF00344.20 ORF141158 - 0.069 12.4 0.0 0.074 12.3 0.0 1.1 1 0 0 1 1 1 0 SecY translocase Pox_D3 PF04580.13 ORF141118 - 0.0055 16.4 0.9 0.0065 16.1 0.9 1.2 1 0 0 1 1 1 1 Chordopoxvirinae D3 protein zf-C3HC4_3 PF13920.6 ORF140839 - 0.0012 18.7 11.3 0.0012 18.7 11.3 2.6 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF140839 - 3.2 8.2 18.5 1.1 9.7 11.6 2.6 2 0 0 2 2 2 0 Ring finger domain Xan_ur_permease PF00860.20 ORF137423 - 2.7e-25 88.9 8.8 2.7e-25 88.9 8.8 1.6 2 0 0 2 2 2 1 Permease family NiFe_hyd_3_EhaA PF17367.2 ORF137423 - 0.55 10.4 6.2 0.12 12.5 2.4 1.8 1 1 1 2 2 2 0 NiFe-hydrogenase-type-3 Eha complex subunit A Ribosomal_S24e PF01282.19 ORF135428 - 3.2e-26 91.1 0.3 3.2e-26 91.1 0.3 2.0 1 1 1 2 2 2 1 Ribosomal protein S24e Surp PF01805.20 ORF134460 - 0.075 13.0 0.5 0.18 11.9 0.5 1.7 1 1 0 1 1 1 0 Surp module CBM_3 PF00942.18 ORF134460 - 0.088 13.2 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 Cellulose binding domain DUF1768 PF08719.11 ORF134403 - 6.1e-09 36.3 0.0 7.3e-09 36.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) Mucin PF01456.17 ORF134192 - 0.0004 20.4 2.6 0.00053 20.0 2.6 1.2 1 0 0 1 1 1 1 Mucin-like glycoprotein Med29 PF11568.8 ORF134185 - 0.081 13.1 3.0 2.2 8.5 0.6 2.1 1 1 1 2 2 2 0 Mediator complex subunit 29 KIP1 PF07765.12 ORF134185 - 0.097 12.8 2.4 0.19 11.9 1.3 1.9 1 1 1 2 2 2 0 KIP1-like protein Ras PF00071.22 ORF133367 - 0.00024 20.7 0.1 0.0021 17.7 0.0 2.0 2 0 0 2 2 2 1 Ras family DUF2244 PF10003.9 ORF131985 - 0.036 13.7 0.8 0.11 12.1 0.0 1.9 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) Ploopntkinase1 PF18748.1 ORF131756 - 0.0094 15.5 0.0 0.013 15.1 0.0 1.1 1 0 0 1 1 1 1 P-loop Nucleotide Kinase1 Ku_C PF03730.14 ORF130702 - 0.022 15.4 3.1 0.043 14.5 3.1 1.4 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm bPH_3 PF14470.6 ORF130702 - 0.023 15.1 0.2 0.042 14.2 0.2 1.5 1 0 0 1 1 1 0 Bacterial PH domain DUF294_C PF10335.9 ORF130181 - 0.069 12.9 0.2 0.096 12.5 0.2 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase substrate binding domain MaoC_dehydratas PF01575.19 ORF130181 - 0.07 12.7 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 MaoC like domain RITA PF17066.5 ORF130065 - 0.31 10.6 2.1 11 5.5 0.1 2.1 2 0 0 2 2 2 0 RBPJ-interacting and tubulin associated protein VIT_2 PF13757.6 ORF129961 - 0.17 11.8 0.8 0.4 10.6 0.8 1.6 1 0 0 1 1 1 0 Vault protein inter-alpha-trypsin domain Gal_mutarotas_2 PF13802.6 ORF129472 - 0.19 12.1 0.0 0.3 11.5 0.0 1.3 1 0 0 1 1 1 0 Galactose mutarotase-like EPL1 PF10513.9 ORF129278 - 0.2 12.1 8.3 0.23 11.8 8.3 1.2 1 0 0 1 1 1 0 Enhancer of polycomb-like Zip PF02535.22 ORF129278 - 5 6.3 25.1 5.5 6.1 25.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF129278 - 6 5.5 8.1 6.6 5.4 8.1 1.1 1 0 0 1 1 1 0 Presenilin Otopetrin PF03189.13 ORF129278 - 6.7 5.4 9.6 7 5.3 9.6 1.1 1 0 0 1 1 1 0 Otopetrin CLN3 PF02487.17 ORF129278 - 8 5.4 5.8 9.4 5.2 5.8 1.1 1 0 0 1 1 1 0 CLN3 protein ALMT PF11744.8 ORF129278 - 9 5.0 9.5 9.8 4.9 9.5 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF863 PF05904.11 ORF129278 - 9.9 4.5 17.5 12 4.2 17.5 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) CCDC106 PF15794.5 ORF128898 - 0.057 13.1 0.8 0.064 13.0 0.8 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 DUF1232 PF06803.12 ORF1285 - 0.059 13.2 0.1 0.1 12.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1232) DmsC PF04976.12 ORF127914 - 2.7e-41 141.9 3.5 3e-41 141.7 3.5 1.0 1 0 0 1 1 1 1 DMSO reductase anchor subunit (DmsC) Anti-adapt_IraP PF10796.9 ORF127914 - 0.055 14.0 0.0 0.075 13.6 0.0 1.2 1 0 0 1 1 1 0 Sigma-S stabilisation anti-adaptor protein DUF2357 PF09823.9 ORF127667 - 0.006 15.9 1.4 0.0072 15.6 1.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2357) TcdB_N PF12918.7 ORF127667 - 5.8 7.3 12.0 7.6 6.9 0.7 2.9 3 1 0 3 3 3 0 TcdB toxin N-terminal helical domain ADAM_CR_2 PF17771.1 ORF127634 - 0.62 10.6 3.6 1.1 9.9 0.9 2.2 1 1 1 2 2 2 0 ADAM cysteine-rich domain DUF5509 PF17625.2 ORF125014 - 0.1 11.7 1.9 0.13 11.4 1.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5509) BC10 PF06726.12 ORF125014 - 0.1 12.8 1.0 0.1 12.8 1.0 2.1 2 1 0 2 2 2 0 Bladder cancer-related protein BC10 Thr_dehydrat_C PF00585.18 ORF124985 - 0.054 13.3 0.0 0.081 12.7 0.0 1.3 1 0 0 1 1 1 0 C-terminal regulatory domain of Threonine dehydratase DUF5616 PF18481.1 ORF124254 - 0.027 14.8 0.3 0.039 14.3 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5616) DUF4208 PF13907.6 ORF124254 - 0.16 12.4 2.9 0.29 11.6 1.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4208) DUF5455 PF17537.2 ORF124034 - 0.069 13.6 0.0 0.096 13.1 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5455) RNase_H2_suC PF08615.11 ORF123693 - 0.0012 19.0 0.2 0.0016 18.6 0.2 1.3 1 0 0 1 1 1 1 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) Axin_b-cat_bind PF08833.10 ORF122945 - 0.0036 17.4 1.7 0.0036 17.4 1.7 3.0 3 1 1 4 4 4 1 Axin beta-catenin binding domain Rhodanese PF00581.20 ORF120083 - 3.5e-05 24.3 0.0 4.2e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain MAAL_N PF05034.13 ORF120083 - 0.081 12.6 0.0 0.094 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus Gal_mutarotas_2 PF13802.6 ORF119063 - 0.19 12.1 0.0 0.3 11.5 0.0 1.3 1 0 0 1 1 1 0 Galactose mutarotase-like TRADD_N PF09034.10 ORF11613 - 0.0043 17.1 0.6 0.042 13.9 0.2 2.2 1 1 1 2 2 2 1 TRADD, N-terminal domain DUF4033 PF13225.6 ORF11613 - 0.081 12.9 0.2 0.13 12.3 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) Tenui_NCP PF04876.12 ORF112052 - 0.093 12.3 0.5 0.14 11.8 0.5 1.2 1 0 0 1 1 1 0 Tenuivirus major non-capsid protein MFS_1 PF07690.16 ORF110105 - 5.5e-07 28.8 3.2 6.2e-07 28.7 3.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily EGF_Tenascin PF18720.1 ORF108584 - 0.73 10.0 5.2 0.15 12.1 1.3 1.9 2 0 0 2 2 2 0 Tenascin EGF domain FAD-oxidase_C PF02913.19 ORF106699 - 0.065 12.9 0.0 0.065 12.9 0.0 1.1 1 0 0 1 1 1 0 FAD linked oxidases, C-terminal domain DUF2255 PF10012.9 ORF106699 - 0.077 13.1 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2255) APC_rep PF18797.1 ORF106699 - 0.42 11.6 3.2 3.9 8.5 0.6 2.2 2 0 0 2 2 2 0 Adenomatous polyposis coli (APC) repeat DUF5301 PF17225.3 ORF105913 - 0.08 13.4 5.9 0.092 13.2 4.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF5300) PolC_DP2 PF03833.13 ORF104710 - 0.25 9.2 0.0 0.26 9.1 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 BPD_transp_1 PF00528.22 ORF102580 - 1.6e-35 122.5 8.5 1.8e-35 122.4 8.5 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component NPAT_C PF15712.5 ORF100409 - 0.43 9.2 5.6 0.49 9.0 5.6 1.1 1 0 0 1 1 1 0 NPAT C terminus SYCP2_ARLD PF18581.1 NODE_47771_length_400_cov_1.424658_g39915_i0reverse_frame_1 - 0.12 12.4 2.6 0.15 12.1 2.6 1.2 1 0 0 1 1 1 0 Synaptonemal complex 2 armadillo-repeat-like domain DUF3440 PF11922.8 NODE_47768_length_400_cov_1.810959_g39912_i0reverse_frame_1 - 1.3e-08 34.8 0.0 2.2e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3440) TryThrA_C PF12319.8 NODE_47768_length_400_cov_1.810959_g39912_i0reverse_frame_1 - 0.072 12.6 0.5 0.094 12.2 0.5 1.1 1 0 0 1 1 1 0 Tryptophan-Threonine-rich plasmodium antigen C terminal DUF3440 PF11922.8 NODE_47766_length_400_cov_2.043836_g39910_i0forward_frame_1 - 0.72 9.5 3.6 1.3 8.7 3.6 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3440) zinc_ribbon_13 PF09855.9 NODE_47766_length_400_cov_2.043836_g39910_i0forward_frame_1 - 2.8 8.2 9.4 2.7 8.2 6.7 2.1 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TonB_N PF16031.5 NODE_47765_length_400_cov_2.043836_g39909_i0forward_frame_1 - 2.8 8.5 9.8 0.38 11.3 4.9 1.9 1 1 1 2 2 2 0 TonB polyproline region FUSC PF04632.12 NODE_47761_length_400_cov_2.295890_g39905_i0reverse_frame_1 - 1.1e-28 100.2 6.0 1.2e-28 100.0 6.0 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family DUF1517 PF07466.11 NODE_47761_length_400_cov_2.295890_g39905_i0reverse_frame_1 - 0.016 15.3 0.2 0.041 14.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1517) G6PD_N PF00479.22 NODE_47759_length_400_cov_2.323288_g39903_i0forward_frame_1 - 0.083 13.5 0.1 0.13 12.9 0.1 1.3 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, NAD binding domain YfkB PF08756.10 NODE_47757_length_400_cov_2.476712_g39901_i0reverse_frame_1 - 2.1 8.1 4.0 3.2 7.5 4.0 1.2 1 0 0 1 1 1 0 YfkB-like domain Yae1_N PF09811.9 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_1 - 0.068 12.9 3.5 0.068 12.9 3.5 3.5 3 0 0 3 3 3 0 Essential protein Yae1, N terminal Zip PF02535.22 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_1 - 0.3 10.2 2.0 0.35 10.0 2.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Aldedh PF00171.22 NODE_47739_length_400_cov_73.523288_g39883_i0forward_frame_1 - 0.18 10.3 3.3 0.21 10.0 3.3 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family DUF3053 PF11254.8 NODE_47726_length_400_cov_207.290411_g39871_i0reverse_frame_1 - 0.014 15.0 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3053) Vta1_C PF18097.1 NODE_47726_length_400_cov_207.290411_g39871_i0reverse_frame_1 - 0.027 14.1 2.3 0.28 10.9 0.2 2.2 2 0 0 2 2 2 0 Vta1 C-terminal domain Pox_LP_H2 PF03356.15 NODE_47698_length_401_cov_2.931694_g39844_i0reverse_frame_1 - 0.083 12.8 1.7 0.11 12.3 1.7 1.2 1 0 0 1 1 1 0 Viral late protein H2 Prok-RING_1 PF14446.6 NODE_47698_length_401_cov_2.931694_g39844_i0forward_frame_1 - 0.11 12.5 6.0 3.8 7.5 1.4 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 MFS_1 PF07690.16 NODE_47697_length_401_cov_3.008197_g39843_i0reverse_frame_1 - 0.0011 18.0 20.0 0.0037 16.2 20.0 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily Ada_Zn_binding PF02805.16 NODE_47693_length_401_cov_3.724044_g39839_i0forward_frame_1 - 0.038 14.0 8.6 0.038 14.0 8.6 1.8 2 1 0 2 2 2 0 Metal binding domain of Ada zf-C3HC4_4 PF15227.6 NODE_47690_length_401_cov_55.005464_g39836_i0reverse_frame_1 - 4.8 7.4 8.8 9 6.5 0.9 3.1 3 0 0 3 3 3 0 zinc finger of C3HC4-type, RING RCC1_2 PF13540.6 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_1 - 0.0029 17.4 3.0 1.1 9.1 0.2 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_1 - 0.94 9.5 6.9 17 5.5 0.9 3.2 3 0 0 3 3 3 0 PheRS DNA binding domain 2 FCP1_C PF09309.10 NODE_47679_length_401_cov_75.961749_g39825_i0forward_frame_1 - 0.044 13.6 4.6 0.056 13.3 4.6 1.2 1 0 0 1 1 1 0 FCP1, C-terminal CPP1-like PF11833.8 NODE_47679_length_401_cov_75.961749_g39825_i0forward_frame_1 - 0.17 11.5 3.8 0.25 11.0 3.8 1.2 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Keratin_B2 PF01500.17 NODE_47667_length_401_cov_95.538251_g39813_i0reverse_frame_1 - 0.0064 16.5 13.0 0.067 13.2 2.5 2.1 2 0 0 2 2 2 2 Keratin, high sulfur B2 protein DUF5367 PF17329.2 NODE_47662_length_401_cov_129.786885_g39808_i0forward_frame_1 - 0.65 10.2 7.0 6.4 7.0 6.6 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5367) Tetraspanin PF00335.20 NODE_47662_length_401_cov_129.786885_g39808_i0forward_frame_1 - 3.3 7.3 8.1 5.3 6.7 8.1 1.2 1 0 0 1 1 1 0 Tetraspanin family Med19 PF10278.9 NODE_47655_length_401_cov_168.773224_g39801_i0reverse_frame_1 - 0.67 9.9 0.1 0.67 9.9 0.1 2.1 2 0 0 2 2 2 0 Mediator of RNA pol II transcription subunit 19 DUF1418 PF07214.12 NODE_47650_length_401_cov_826.469945_g39796_i0forward_frame_1 - 0.046 13.6 1.0 0.046 13.6 1.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1418) Ion_trans PF00520.31 NODE_47639_length_402_cov_1.809264_g39785_i0forward_frame_1 - 8.4e-18 64.5 2.5 1.3e-17 63.8 2.5 1.2 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 NODE_47639_length_402_cov_1.809264_g39785_i0forward_frame_1 - 4.4e-05 22.4 4.3 6.7e-05 21.7 4.3 1.1 1 0 0 1 1 1 1 Polycystin cation channel DUF3671 PF12420.8 NODE_47639_length_402_cov_1.809264_g39785_i0forward_frame_1 - 0.0059 16.7 3.5 0.0098 16.0 3.5 1.5 1 1 0 1 1 1 1 Protein of unknown function Biotin_lipoyl PF00364.22 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 1.1e-19 70.1 6.3 1.5e-19 69.6 6.3 1.2 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 3.6e-06 26.7 7.3 3.4e-05 23.6 1.7 2.8 2 1 1 3 3 3 2 Biotin-lipoyl like GCV_H PF01597.19 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 2.5e-05 24.2 0.3 4.4e-05 23.4 0.3 1.4 1 0 0 1 1 1 1 Glycine cleavage H-protein PTS_EIIA_1 PF00358.20 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.0022 17.8 1.0 0.19 11.5 0.1 2.3 1 1 1 2 2 2 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RnfC_N PF13375.6 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.0096 15.9 3.4 0.68 9.9 0.1 2.5 2 1 1 3 3 3 2 RnfC Barrel sandwich hybrid domain HlyD_D23 PF16576.5 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.013 14.7 0.8 0.094 11.9 0.1 2.3 2 1 1 3 3 3 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion PYNP_C PF07831.13 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.049 13.3 2.7 0.49 10.1 0.2 2.5 2 1 1 3 3 3 0 Pyrimidine nucleoside phosphorylase C-terminal domain NQRA PF05896.11 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.052 13.0 1.1 0.13 11.7 1.1 1.6 1 1 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PASTA PF03793.19 NODE_47634_length_402_cov_2.043597_g39780_i0reverse_frame_1 - 0.12 12.2 5.7 2.4 8.1 0.3 2.8 1 1 1 2 2 2 0 PASTA domain RabGAP-TBC PF00566.18 NODE_47624_length_402_cov_3.049046_g39770_i0reverse_frame_1 - 0.034 13.8 1.6 0.047 13.3 1.6 1.2 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Herpes_IE1 PF07340.11 NODE_47619_length_402_cov_3.348774_g39765_i0forward_frame_1 - 0.15 11.0 2.3 0.18 10.7 2.3 1.1 1 0 0 1 1 1 0 Cytomegalovirus IE1 protein TraT PF05818.12 NODE_47618_length_402_cov_3.367847_g39764_i0reverse_frame_1 - 1 9.0 2.4 1.5 8.5 2.4 1.2 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein DUF261 PF03196.13 NODE_47613_length_402_cov_9.465940_g39759_i0reverse_frame_1 - 0.0065 16.6 2.2 0.012 15.7 0.2 2.0 1 1 1 2 2 2 1 Protein of unknown function, DUF261 DUF4014 PF13198.6 NODE_47612_length_402_cov_16.722071_g39758_i0reverse_frame_1 - 0.036 14.4 0.6 0.051 14.0 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4014) DUF5359 PF17313.2 NODE_47612_length_402_cov_16.722071_g39758_i0reverse_frame_1 - 0.059 13.4 3.5 0.1 12.6 3.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5359) DUF4153 PF13687.6 NODE_47576_length_402_cov_322.288828_g39722_i0reverse_frame_1 - 0.084 12.5 0.1 0.17 11.5 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4153) RPT PF13446.6 NODE_47576_length_402_cov_322.288828_g39722_i0reverse_frame_1 - 0.13 12.2 0.1 0.25 11.3 0.1 1.5 1 0 0 1 1 1 0 A repeated domain in UCH-protein Histone_H2A_C PF16211.5 NODE_47576_length_402_cov_322.288828_g39722_i0reverse_frame_1 - 2.1 8.2 5.0 30 4.5 0.0 2.6 2 0 0 2 2 2 0 C-terminus of histone H2A AAA_assoc_C PF09821.9 NODE_47564_length_403_cov_1.600543_g39713_i0reverse_frame_3 - 0.051 14.1 0.0 0.083 13.4 0.0 1.3 1 0 0 1 1 1 0 C-terminal AAA-associated domain Clathrin_propel PF01394.20 NODE_47561_length_403_cov_1.875000_g39710_i0reverse_frame_3 - 0.062 13.6 0.5 0.21 12.0 0.4 2.0 2 0 0 2 2 2 0 Clathrin propeller repeat BAP PF06639.11 NODE_47556_length_403_cov_2.089674_g39705_i0reverse_frame_2 - 0.12 12.7 0.4 0.12 12.7 0.4 1.7 2 0 0 2 2 2 0 Basal layer antifungal peptide (BAP) AI-2E_transport PF01594.16 NODE_47554_length_403_cov_2.258152_g39703_i0reverse_frame_2 - 2.4e-18 66.4 1.3 2.6e-18 66.3 1.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter ODV-E18 PF10717.9 NODE_47554_length_403_cov_2.258152_g39703_i0reverse_frame_2 - 0.058 13.3 0.9 0.11 12.4 0.9 1.5 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Condensin2nSMC PF12422.8 NODE_47545_length_403_cov_2.785326_g39694_i0reverse_frame_2 - 0.021 15.0 0.3 0.031 14.5 0.3 1.4 1 0 0 1 1 1 0 Condensin II non structural maintenance of chromosomes subunit TMEM210 PF15195.6 NODE_47544_length_403_cov_2.798913_g39693_i0reverse_frame_3 - 0.17 12.3 0.0 0.23 11.9 0.0 1.2 1 0 0 1 1 1 0 TMEM210 family Complex1_49kDa PF00346.19 NODE_47544_length_403_cov_2.798913_g39693_i0forward_frame_3 - 1.6e-14 53.7 0.0 2.1e-10 40.2 0.0 2.3 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PspB PF06667.12 NODE_47542_length_403_cov_2.904891_g39691_i0reverse_frame_3 - 0.024 14.7 0.1 0.053 13.6 0.1 1.5 1 0 0 1 1 1 0 Phage shock protein B RPGR1_C PF18111.1 NODE_47542_length_403_cov_2.904891_g39691_i0reverse_frame_3 - 0.16 11.8 2.4 0.55 10.1 0.3 2.0 1 1 1 2 2 2 0 Retinitis pigmentosa G-protein regulator interacting C-terminal DP PF08781.10 NODE_47541_length_403_cov_2.961957_g39690_i0reverse_frame_2 - 0.11 12.4 5.5 0.12 12.3 5.0 1.3 1 1 0 1 1 1 0 Transcription factor DP PCSK9_C3 PF18463.1 NODE_47540_length_403_cov_3.097826_g39689_i0reverse_frame_3 - 0.069 13.4 0.3 0.1 12.8 0.3 1.2 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain PRT_C PF08372.10 NODE_47540_length_403_cov_3.097826_g39689_i0forward_frame_2 - 0.074 12.8 2.6 0.11 12.2 2.6 1.4 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal Ribosomal_L14 PF00238.19 NODE_47536_length_403_cov_3.760870_g39685_i0reverse_frame_2 - 5.4e-45 152.4 1.6 6.1e-45 152.2 1.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Gp58 PF07902.11 NODE_47536_length_403_cov_3.760870_g39685_i0reverse_frame_2 - 0.063 11.6 0.1 0.063 11.6 0.1 1.1 1 0 0 1 1 1 0 gp58-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks193.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks193.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks193.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks193.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CENP-F_C_Rb_bdg PF10490.9 NODE_47536_length_403_cov_3.760870_g39685_i0forward_frame_2 - 0.14 11.6 0.5 0.34 10.4 0.5 1.6 1 0 0 1 1 1 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 Aminotran_5 PF00266.19 NODE_47535_length_403_cov_4.222826_g39684_i0forward_frame_2 - 2.2e-11 43.3 0.0 2.4e-11 43.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V PhoU_div PF01865.16 NODE_47530_length_403_cov_44.048913_g39679_i0reverse_frame_2 - 0.011 15.0 4.1 0.58 9.5 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function DUF47 Syntaxin-6_N PF09177.11 NODE_47530_length_403_cov_44.048913_g39679_i0reverse_frame_2 - 0.023 15.3 6.0 0.073 13.6 6.0 1.8 1 1 0 1 1 1 0 Syntaxin 6, N-terminal BRE1 PF08647.11 NODE_47530_length_403_cov_44.048913_g39679_i0reverse_frame_2 - 0.88 9.7 13.6 0.26 11.4 6.5 2.3 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase cNMP_binding PF00027.29 NODE_47522_length_403_cov_62.562500_g39671_i0reverse_frame_2 - 9.7e-08 32.0 0.0 1.4e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF3689 PF12463.8 NODE_47522_length_403_cov_62.562500_g39671_i0forward_frame_3 - 0.047 13.0 0.1 0.057 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3689) DUF613 PF04764.12 NODE_47517_length_403_cov_73.293478_g39666_i0reverse_frame_2 - 0.0012 19.0 2.0 0.002 18.2 2.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF613) DUF2613 PF11021.8 NODE_47516_length_403_cov_74.217391_g39665_i0reverse_frame_3 - 0.059 13.5 5.4 0.16 12.1 5.4 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) IBR PF01485.21 NODE_47516_length_403_cov_74.217391_g39665_i0reverse_frame_2 - 8.5 6.7 14.6 0.24 11.7 2.0 2.5 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain DUF1364 PF07102.12 NODE_47516_length_403_cov_74.217391_g39665_i0forward_frame_3 - 0.036 13.9 0.5 0.064 13.1 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) Ac76 PF05814.11 NODE_47516_length_403_cov_74.217391_g39665_i0forward_frame_3 - 0.054 13.5 0.0 0.077 13.0 0.0 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) RSRP PF17069.5 NODE_47516_length_403_cov_74.217391_g39665_i0forward_frame_3 - 1.6 8.2 10.5 2 7.9 10.5 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Coilin_N PF15862.5 NODE_47502_length_403_cov_99.736413_g39651_i0reverse_frame_3 - 0.17 11.7 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 Coilin N-terminus UPF0547 PF10571.9 NODE_47502_length_403_cov_99.736413_g39651_i0forward_frame_2 - 0.025 14.6 3.1 0.025 14.6 3.1 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 HTH_5 PF01022.20 NODE_47502_length_403_cov_99.736413_g39651_i0forward_frame_2 - 0.12 12.2 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family C5HCH PF17982.1 NODE_47499_length_403_cov_104.290761_g39648_i0forward_frame_3 - 1 9.6 4.8 1.9 8.7 0.3 2.5 3 0 0 3 3 3 0 NSD Cys-His rich domain SCAN PF02023.17 NODE_47499_length_403_cov_104.290761_g39648_i0forward_frame_2 - 0.11 12.3 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 SCAN domain Glyco_tran_28_C PF04101.16 NODE_47494_length_403_cov_139.967391_g39643_i0reverse_frame_3 - 0.071 13.1 0.0 0.098 12.6 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 28 C-terminal domain NAP PF00956.18 NODE_47491_length_403_cov_151.972826_g39640_i0reverse_frame_2 - 9.5 5.3 7.4 12 5.0 7.4 1.1 1 0 0 1 1 1 0 Nucleosome assembly protein (NAP) Serinc PF03348.15 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.0063 15.5 0.9 0.0072 15.3 0.9 1.1 1 0 0 1 1 1 1 Serine incorporator (Serinc) SID-1_RNA_chan PF13965.6 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.085 11.3 3.5 0.091 11.2 3.5 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 ArfGap PF01412.18 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.12 12.4 7.0 0.19 11.8 6.9 1.5 1 1 0 1 1 1 0 Putative GTPase activating protein for Arf CLN3 PF02487.17 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.33 10.0 1.4 0.39 9.7 1.4 1.1 1 0 0 1 1 1 0 CLN3 protein Presenilin PF01080.17 NODE_47481_length_403_cov_209.413043_g39630_i0reverse_frame_2 - 0.89 8.3 3.6 0.92 8.2 3.6 1.1 1 0 0 1 1 1 0 Presenilin Trp_leader2 PF08056.11 NODE_47478_length_403_cov_290.679348_g39627_i0forward_frame_2 - 2 8.5 5.2 4.8 7.3 2.0 2.2 2 0 0 2 2 2 0 Tryptophan operon leader peptide S_2TMBeta PF18153.1 NODE_47469_length_403_cov_5153.048913_g39620_i0reverse_frame_3 - 0.14 12.0 0.3 0.17 11.6 0.3 1.1 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain zf-C3Hc3H PF13891.6 NODE_47468_length_404_cov_1.249322_g39619_i0reverse_frame_3 - 0.39 11.1 2.7 0.27 11.6 0.5 1.9 2 0 0 2 2 2 0 Potential DNA-binding domain Filo_VP24 PF06389.11 NODE_47464_length_404_cov_1.574526_g39615_i0reverse_frame_2 - 0.19 11.2 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 Filovirus membrane-associated protein VP24 HAND PF09110.11 NODE_47464_length_404_cov_1.574526_g39615_i0forward_frame_2 - 0.054 14.2 0.0 0.065 14.0 0.0 1.2 1 0 0 1 1 1 0 HAND SPO11_like PF03533.14 NODE_47464_length_404_cov_1.574526_g39615_i0forward_frame_2 - 0.12 12.4 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 SPO11 homologue DUF5391 PF17369.2 NODE_47463_length_404_cov_1.764228_g39614_i0reverse_frame_2 - 0.19 11.8 5.0 1.6 8.8 4.9 2.1 1 1 0 1 1 1 0 Family of unknown function (DUF5391) MIP PF00230.20 NODE_47462_length_404_cov_1.772358_g39613_i0reverse_frame_2 - 0.049 13.3 0.2 0.056 13.1 0.2 1.1 1 0 0 1 1 1 0 Major intrinsic protein Fucose_iso_N1 PF07881.12 NODE_47459_length_404_cov_2.018970_g39610_i0reverse_frame_2 - 0.19 11.6 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 L-fucose isomerase, first N-terminal domain DUF3810 PF12725.7 NODE_47459_length_404_cov_2.018970_g39610_i0reverse_frame_2 - 0.21 10.9 0.0 0.25 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF3794 PF12673.7 NODE_47458_length_404_cov_2.059621_g39609_i0forward_frame_2 - 0.018 15.3 0.1 0.028 14.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3794) DAO PF01266.24 NODE_47455_length_404_cov_2.203252_g39606_i0forward_frame_3 - 7.9e-08 32.3 0.0 8.9e-08 32.1 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase DUF2770 PF10968.8 NODE_47455_length_404_cov_2.203252_g39606_i0forward_frame_2 - 1.1e-15 57.3 11.1 1.9e-15 56.5 11.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2770) HCV_capsid PF01543.17 NODE_47453_length_404_cov_2.436314_g39604_i0forward_frame_2 - 0.16 12.2 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus capsid protein DNA_Packaging_2 PF11123.8 NODE_47451_length_404_cov_2.780488_g39602_i0reverse_frame_3 - 0.17 12.1 0.0 0.25 11.6 0.0 1.2 1 0 0 1 1 1 0 DNA packaging protein DUF3626 PF12294.8 NODE_47451_length_404_cov_2.780488_g39602_i0reverse_frame_3 - 0.22 10.6 0.0 0.26 10.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3626) FAD_binding_6 PF00970.24 NODE_47451_length_404_cov_2.780488_g39602_i0reverse_frame_2 - 0.076 13.4 0.1 0.12 12.7 0.1 1.3 1 0 0 1 1 1 0 Oxidoreductase FAD-binding domain Transposase_1 PF01359.18 NODE_47451_length_404_cov_2.780488_g39602_i0reverse_frame_2 - 0.78 9.6 3.4 1.7 8.5 1.2 2.3 2 1 0 2 2 2 0 Transposase (partial DDE domain) UCH PF00443.29 NODE_47449_length_404_cov_3.262873_g39600_i0reverse_frame_3 - 3.1e-09 36.7 0.2 5.1e-09 36.0 0.2 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_47449_length_404_cov_3.262873_g39600_i0reverse_frame_3 - 4e-05 23.4 0.2 5.8e-05 22.8 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PEX11 PF05648.14 NODE_47441_length_404_cov_34.447154_g39593_i0reverse_frame_3 - 2.8 7.4 11.2 0.26 10.7 6.0 1.7 1 1 1 2 2 2 0 Peroxisomal biogenesis factor 11 (PEX11) Phage_head_chap PF11113.8 NODE_47439_length_404_cov_61.360434_g39591_i0reverse_frame_2 - 0.046 13.8 0.1 1.2 9.2 0.0 2.3 2 0 0 2 2 2 0 Head assembly gene product CpeT PF06206.11 NODE_47439_length_404_cov_61.360434_g39591_i0reverse_frame_2 - 0.1 12.6 0.2 0.35 10.8 0.1 1.7 2 0 0 2 2 2 0 CpeT/CpcT family (DUF1001) NOG1 PF06858.14 NODE_47438_length_404_cov_66.623306_g39590_i0forward_frame_3 - 0.095 12.5 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) Enterotoxin_a PF01375.17 NODE_47433_length_404_cov_77.761518_g39585_i0reverse_frame_3 - 1.1 8.8 4.9 1.4 8.5 4.9 1.1 1 0 0 1 1 1 0 Heat-labile enterotoxin alpha chain HEPN_AbiA_CTD PF18732.1 NODE_47433_length_404_cov_77.761518_g39585_i0reverse_frame_2 - 0.01 15.8 0.3 0.014 15.3 0.3 1.2 1 0 0 1 1 1 0 HEPN like, Abia C-terminal domain DUF5556 PF17711.1 NODE_47433_length_404_cov_77.761518_g39585_i0forward_frame_3 - 0.044 13.7 0.1 0.064 13.2 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5556) Nse4_C PF08743.10 NODE_47433_length_404_cov_77.761518_g39585_i0forward_frame_3 - 0.063 13.5 0.1 0.1 12.8 0.1 1.3 1 0 0 1 1 1 0 Nse4 C-terminal BTK PF00779.19 NODE_47428_length_404_cov_87.829268_g39580_i0forward_frame_3 - 0.38 10.6 3.9 0.98 9.3 3.9 1.6 1 0 0 1 1 1 0 BTK motif RCC1_2 PF13540.6 NODE_47426_length_404_cov_90.010840_g39578_i0reverse_frame_2 - 0.00039 20.1 0.0 0.65 9.9 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF359 PF04019.12 NODE_47426_length_404_cov_90.010840_g39578_i0reverse_frame_2 - 0.059 13.0 0.0 3.8 7.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF359) DUF155 PF02582.14 NODE_47426_length_404_cov_90.010840_g39578_i0reverse_frame_2 - 0.18 11.9 0.1 1.3 9.1 0.1 2.0 1 1 0 1 1 1 0 Uncharacterised ACR, YagE family COG1723 PheRS_DBD2 PF18554.1 NODE_47426_length_404_cov_90.010840_g39578_i0reverse_frame_2 - 0.96 9.5 6.0 10 6.2 0.6 2.4 2 0 0 2 2 2 0 PheRS DNA binding domain 2 DUF4648 PF15505.6 NODE_47424_length_404_cov_96.666667_g39576_i0reverse_frame_2 - 0.11 13.3 0.1 0.25 12.2 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4648) DUF3297 PF11730.8 NODE_47422_length_404_cov_100.737127_g39574_i0reverse_frame_2 - 0.076 12.9 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3297) PAN_4 PF14295.6 NODE_47422_length_404_cov_100.737127_g39574_i0reverse_frame_2 - 0.085 12.8 4.5 0.16 11.9 4.5 1.4 1 0 0 1 1 1 0 PAN domain TRAM_LAG1_CLN8 PF03798.16 NODE_47412_length_404_cov_161.704607_g39564_i0forward_frame_2 - 0.097 12.4 0.4 0.11 12.2 0.4 1.1 1 0 0 1 1 1 0 TLC domain Amastin PF07344.11 NODE_47406_length_404_cov_241.035230_g39558_i0reverse_frame_2 - 0.35 10.7 4.4 0.22 11.4 1.4 1.8 1 1 1 2 2 2 0 Amastin surface glycoprotein MdcG PF10620.9 NODE_47406_length_404_cov_241.035230_g39558_i0forward_frame_3 - 0.0049 16.7 0.9 0.0061 16.4 0.9 1.1 1 0 0 1 1 1 1 Phosphoribosyl-dephospho-CoA transferase MdcG DUF4680 PF15730.5 NODE_47404_length_404_cov_248.574526_g39556_i0reverse_frame_2 - 0.054 13.8 0.4 0.063 13.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4680) ACAS_N PF16177.5 NODE_47403_length_404_cov_272.924119_g39555_i0reverse_frame_3 - 0.042 13.8 0.1 0.09 12.7 0.1 1.5 1 0 0 1 1 1 0 Acetyl-coenzyme A synthetase N-terminus DUF2312 PF10073.9 NODE_47403_length_404_cov_272.924119_g39555_i0reverse_frame_3 - 0.25 11.0 2.7 1.8 8.3 0.8 2.5 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) FAM163 PF15069.6 NODE_47400_length_404_cov_327.837398_g39552_i0reverse_frame_2 - 0.00045 20.7 0.5 0.00067 20.1 0.5 1.3 1 0 0 1 1 1 1 FAM163 family UPF0239 PF06783.11 NODE_47400_length_404_cov_327.837398_g39552_i0reverse_frame_2 - 0.027 14.7 2.2 0.043 14.0 2.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) ASFV_J13L PF05568.11 NODE_47400_length_404_cov_327.837398_g39552_i0reverse_frame_2 - 0.065 13.0 0.0 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 African swine fever virus J13L protein DUF4589 PF15252.6 NODE_47400_length_404_cov_327.837398_g39552_i0forward_frame_3 - 0.067 13.2 2.4 0.08 12.9 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) DUF5375 PF17345.2 NODE_47397_length_404_cov_844.997290_g39549_i0reverse_frame_3 - 0.14 12.1 0.4 0.14 12.1 0.4 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5375) DUF5540 PF17694.1 NODE_47390_length_404_cov_9568.807588_g39545_i0reverse_frame_2 - 0.34 11.5 5.6 5.9 7.5 1.1 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5540) Ldl_recept_a PF00057.18 NODE_47390_length_404_cov_9568.807588_g39545_i0forward_frame_2 - 0.069 13.4 0.5 2.7 8.3 0.1 2.2 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A DUF575 PF04746.12 NODE_47379_length_405_cov_2.302703_g39534_i0reverse_frame_2 - 0.15 12.3 0.4 11 6.3 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF575) Glyco_hydro_2_N PF02837.18 NODE_47375_length_405_cov_2.729730_g39530_i0forward_frame_2 - 2.6e-16 60.0 0.4 3.6e-16 59.5 0.4 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, sugar binding domain DENN PF02141.21 NODE_47368_length_405_cov_3.564865_g39523_i0forward_frame_3 - 3.3e-06 27.2 0.1 3.3e-06 27.2 0.1 1.2 1 0 0 1 1 1 1 DENN (AEX-3) domain zf-PARP PF00645.18 NODE_47359_length_405_cov_58.297297_g39514_i0reverse_frame_2 - 0.076 13.9 0.2 0.12 13.3 0.2 1.3 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region SpoU_methylase PF00588.19 NODE_47359_length_405_cov_58.297297_g39514_i0forward_frame_3 - 2.8e-11 43.7 0.0 3.8e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family Hema_stalk PF08720.10 NODE_47358_length_405_cov_59.343243_g39513_i0forward_frame_2 - 0.068 12.9 2.4 0.094 12.4 2.4 1.2 1 0 0 1 1 1 0 Influenza C hemagglutinin stalk DUF1936 PF09151.10 NODE_47355_length_405_cov_65.870270_g39510_i0reverse_frame_3 - 0.07 13.1 0.5 0.14 12.1 0.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) DAO PF01266.24 NODE_47355_length_405_cov_65.870270_g39510_i0forward_frame_3 - 1.4e-06 28.2 0.1 1.5e-06 28.0 0.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase FIST PF08495.10 NODE_47355_length_405_cov_65.870270_g39510_i0forward_frame_3 - 0.15 12.0 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 FIST N domain Orthopox_F14 PF06076.12 NODE_47353_length_405_cov_70.327027_g39508_i0forward_frame_3 - 0.025 14.8 0.2 0.047 14.0 0.2 1.5 1 0 0 1 1 1 0 Orthopoxvirus F14 protein WW PF00397.26 NODE_47350_length_405_cov_75.424324_g39505_i0reverse_frame_3 - 0.00089 19.3 0.3 0.0014 18.7 0.3 1.3 1 0 0 1 1 1 1 WW domain DUF4729 PF15866.5 NODE_47349_length_405_cov_76.829730_g39504_i0reverse_frame_2 - 0.037 13.4 0.2 0.043 13.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4729) aGPT-Pplase2 PF18724.1 NODE_47339_length_405_cov_97.456757_g39494_i0forward_frame_2 - 0.085 12.6 1.3 2.3 7.9 0.1 2.0 2 0 0 2 2 2 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 2 UL11 PF11094.8 NODE_47331_length_405_cov_129.664865_g39486_i0reverse_frame_3 - 0.011 15.5 1.5 0.019 14.8 1.5 1.3 1 0 0 1 1 1 0 Membrane-associated tegument protein DUF3099 PF11298.8 NODE_47331_length_405_cov_129.664865_g39486_i0forward_frame_3 - 5.1 7.3 7.1 16 5.7 1.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3099) Mid1 PF12929.7 NODE_47327_length_405_cov_164.535135_g39482_i0reverse_frame_3 - 0.018 14.3 6.2 0.025 13.8 6.2 1.1 1 0 0 1 1 1 0 Stretch-activated Ca2+-permeable channel component Antimicrobial10 PF08105.11 NODE_47327_length_405_cov_164.535135_g39482_i0forward_frame_2 - 0.094 12.8 0.1 0.22 11.6 0.1 1.6 1 0 0 1 1 1 0 Metchnikowin family Tmp39 PF10271.9 NODE_47324_length_405_cov_182.348649_g39479_i0forward_frame_3 - 0.058 12.4 0.1 0.062 12.3 0.1 1.1 1 0 0 1 1 1 0 Putative transmembrane protein YbaB_DNA_bd PF02575.16 NODE_47319_length_405_cov_238.659459_g39474_i0forward_frame_3 - 0.022 15.0 0.1 0.04 14.1 0.1 1.5 1 0 0 1 1 1 0 YbaB/EbfC DNA-binding family HCV_capsid PF01543.17 NODE_47318_length_405_cov_263.832432_g39473_i0reverse_frame_3 - 1.3 9.2 8.6 4.2 7.6 1.0 2.1 1 1 1 2 2 2 0 Hepatitis C virus capsid protein LZ_Tnp_IS481 PF13011.6 NODE_47318_length_405_cov_263.832432_g39473_i0reverse_frame_2 - 0.021 15.3 0.5 0.039 14.5 0.5 1.5 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 Mpv17_PMP22 PF04117.12 NODE_47314_length_405_cov_370.821622_g39469_i0forward_frame_3 - 0.0039 17.4 3.4 0.0095 16.2 3.4 1.7 1 0 0 1 1 1 1 Mpv17 / PMP22 family RNA_pol_Rpb1_R PF05001.13 NODE_47312_length_405_cov_487.451351_g39467_i0reverse_frame_2 - 1.7 9.1 7.4 2 8.9 1.0 3.3 3 1 0 3 3 3 0 RNA polymerase Rpb1 C-terminal repeat v110 PF01639.17 NODE_47312_length_405_cov_487.451351_g39467_i0forward_frame_2 - 0.056 13.3 0.3 0.085 12.7 0.3 1.3 1 0 0 1 1 1 0 Viral family 110 DUF2678 PF10856.8 NODE_47311_length_405_cov_593.829730_g39466_i0reverse_frame_3 - 8.3 6.4 10.8 4 7.4 4.6 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2678) zf-A20 PF01754.16 NODE_47311_length_405_cov_593.829730_g39466_i0forward_frame_3 - 0.043 13.8 7.9 0.18 11.8 1.0 2.5 2 0 0 2 2 2 0 A20-like zinc finger DUF3716 PF12511.8 NODE_47311_length_405_cov_593.829730_g39466_i0forward_frame_3 - 2.6 8.2 9.2 1.5 8.9 5.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3716) C1_1 PF00130.22 ORF99781 - 0.046 13.6 6.3 0.11 12.4 6.3 1.7 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) FAM220 PF15487.6 ORF99184 - 0.29 10.7 3.7 0.34 10.5 3.7 1.1 1 0 0 1 1 1 0 FAM220 family GLTSCR1 PF15249.6 ORF98479 - 0.027 14.9 0.1 0.098 13.1 0.0 1.8 1 1 1 2 2 2 0 Conserved region of unknown function on GLTSCR protein DUF816 PF05674.12 ORF98479 - 0.055 13.4 4.8 0.068 13.1 4.8 1.2 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF816) DUF5043 PF16446.5 ORF98479 - 0.35 10.9 5.9 0.54 10.2 1.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5043) UMP1 PF05348.11 ORF97222 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF97222 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein ATPase-cat_bd PF12156.8 ORF9665 - 0.08 13.7 1.6 0.12 13.2 1.6 1.3 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase AAA_14 PF13173.6 ORF9575 - 0.053 13.6 0.4 0.065 13.3 0.4 1.2 1 0 0 1 1 1 0 AAA domain Antimicrobial12 PF08107.11 ORF9557 - 0.21 11.3 0.1 0.37 10.6 0.1 1.3 1 0 0 1 1 1 0 Pleurocidin family DUF4476 PF14771.6 ORF94648 - 0.002 18.4 1.7 0.0025 18.1 0.8 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4476) DUF3523 PF12037.8 ORF94648 - 0.0059 16.0 9.1 0.007 15.8 9.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3523) Phage_Mu_Gam PF07352.12 ORF94648 - 0.021 14.8 5.0 0.021 14.8 5.0 2.0 1 1 0 2 2 2 0 Bacteriophage Mu Gam like protein DUF2119 PF09892.9 ORF94648 - 0.04 13.3 2.3 0.05 13.0 1.6 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2119) DUF5376 PF17346.2 ORF94648 - 0.042 14.2 3.8 0.054 13.8 3.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5376) Nore1-SARAH PF16517.5 ORF94648 - 0.05 13.5 6.0 0.32 10.9 0.3 2.6 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Sds3 PF08598.11 ORF94648 - 0.077 13.0 10.3 0.11 12.5 10.0 1.3 1 1 0 1 1 1 0 Sds3-like TruB_N PF01509.18 ORF94648 - 0.09 13.1 0.9 0.11 12.9 0.9 1.2 1 0 0 1 1 1 0 TruB family pseudouridylate synthase (N terminal domain) EF-G-binding_N PF07299.11 ORF94648 - 0.4 11.2 6.3 3 8.4 0.8 2.9 1 1 0 2 2 2 0 Elongation factor G-binding protein, N-terminal IlvC PF01450.19 ORF94648 - 0.4 11.0 3.9 0.48 10.7 3.9 1.2 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain DASH_Dad3 PF08656.10 ORF94648 - 0.62 10.2 5.7 2.3 8.4 4.3 2.4 1 1 1 2 2 2 0 DASH complex subunit Dad3 Phasin PF05597.11 ORF94648 - 0.7 9.9 6.2 3.5 7.6 1.5 2.0 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) PKK PF12474.8 ORF94648 - 0.84 9.8 14.1 0.11 12.6 5.1 2.2 1 1 1 2 2 2 0 Polo kinase kinase YlbD_coat PF14071.6 ORF94648 - 0.96 9.7 9.0 0.13 12.5 2.2 2.0 1 1 1 2 2 2 0 Putative coat protein UMP1 PF05348.11 ORF94646 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF94646 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein UMP1 PF05348.11 ORF94618 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF94618 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein TPR_16 PF13432.6 ORF9459 - 0.12 13.1 0.1 0.2 12.3 0.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Glyco_trans_2_3 PF13632.6 ORF92081 - 0.036 14.0 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 COG4 PF08318.12 ORF91823 - 0.0049 16.0 1.2 0.057 12.5 0.1 2.0 1 1 1 2 2 2 2 COG4 transport protein Histone_H2A_C PF16211.5 ORF90906 - 9.5e-16 57.2 0.1 1.5e-15 56.6 0.1 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 ORF90906 - 6.4e-15 55.7 0.0 7.7e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF90906 - 9.2e-06 25.9 0.0 1.4e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone MTD PF01993.18 ORF90247 - 0.018 14.4 0.1 0.021 14.1 0.1 1.1 1 0 0 1 1 1 0 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase HalOD2 PF18547.1 ORF90146 - 0.031 14.2 2.7 0.28 11.1 0.1 2.5 2 0 0 2 2 2 0 Halobacterial output domain 2 DUF2674 PF10879.8 ORF89884 - 0.0042 16.6 1.8 0.14 11.7 1.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF2674) PriX PF18689.1 ORF89884 - 0.11 12.8 1.8 0.16 12.3 1.8 1.3 1 0 0 1 1 1 0 Primase X PknG_TPR PF16918.5 ORF89242 - 0.1 11.3 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat IL10 PF00726.17 ORF89242 - 0.13 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Interleukin 10 DUF1573 PF07610.11 ORF87801 - 0.013 15.5 0.3 0.025 14.6 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1573) RRN3 PF05327.11 ORF87736 - 0.0015 17.2 0.8 0.0017 17.0 0.8 1.0 1 0 0 1 1 1 1 RNA polymerase I specific transcription initiation factor RRN3 DHHC PF01529.20 ORF87518 - 5.5e-08 33.0 10.2 5.5e-08 33.0 10.2 1.5 2 0 0 2 2 2 1 DHHC palmitoyltransferase HIT PF01230.23 ORF86569 - 1.1e-27 96.6 0.0 1.4e-27 96.3 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 ORF86569 - 2.5e-21 76.3 0.0 3e-21 76.0 0.0 1.0 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding UMP1 PF05348.11 ORF82410 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF82410 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein DUF4298 PF14131.6 ORF79870 - 0.0021 18.0 0.6 0.0031 17.4 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4298) TMF_TATA_bd PF12325.8 ORF79870 - 0.0067 16.6 6.4 0.0087 16.3 6.4 1.3 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding DUF3584 PF12128.8 ORF79870 - 0.014 12.9 4.5 0.016 12.7 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) TMCO5 PF14992.6 ORF79870 - 0.016 14.8 4.9 0.017 14.7 4.9 1.0 1 0 0 1 1 1 0 TMCO5 family MCU PF04678.13 ORF79870 - 0.018 15.1 2.0 0.021 14.9 1.2 1.5 1 1 0 1 1 1 0 Mitochondrial calcium uniporter TSKS PF15358.6 ORF79870 - 0.02 13.3 7.6 0.023 13.1 7.6 1.1 1 0 0 1 1 1 0 Testis-specific serine kinase substrate V-ATPase_G_2 PF16999.5 ORF79870 - 0.028 14.9 5.5 0.042 14.3 5.5 1.2 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit LidA_Long_CC PF18641.1 ORF79870 - 0.044 13.8 2.3 0.14 12.2 2.3 1.8 1 1 0 1 1 1 0 LidA long coiled-coil domain ABC_tran_CTD PF16326.5 ORF79870 - 0.059 13.6 9.6 0.78 10.0 4.4 2.2 2 0 0 2 2 2 0 ABC transporter C-terminal domain Occludin_ELL PF07303.13 ORF79870 - 0.064 14.0 1.5 0.11 13.2 1.5 1.3 1 0 0 1 1 1 0 Occludin homology domain GAS PF13851.6 ORF79870 - 0.071 12.5 9.2 0.09 12.1 9.2 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding CLZ PF16526.5 ORF79870 - 0.14 12.6 8.9 0.053 13.9 3.2 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ADIP PF11559.8 ORF79870 - 0.2 11.8 7.0 0.45 10.6 6.4 1.8 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding V_ATPase_I PF01496.19 ORF79870 - 0.28 9.1 2.1 0.27 9.1 2.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Spc7 PF08317.11 ORF79870 - 0.49 9.2 7.5 0.59 9.0 7.5 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4407 PF14362.6 ORF79870 - 0.55 9.5 4.4 0.65 9.3 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF812 PF05667.11 ORF79870 - 0.66 8.8 9.1 2.2 7.1 2.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Tho2 PF11262.8 ORF79870 - 0.73 9.0 3.9 0.59 9.3 1.3 1.8 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 YscO-like PF16789.5 ORF79870 - 0.73 9.9 11.7 0.81 9.7 10.8 1.4 1 1 0 1 1 1 0 YscO-like protein APG6_N PF17675.1 ORF79870 - 1.2 9.7 10.5 2.1 8.8 9.9 1.7 1 1 1 2 2 2 0 Apg6 coiled-coil region Pkinase PF00069.25 ORF7969 - 3.4e-13 49.6 0.0 5.2e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7969 - 1.5e-10 40.8 0.0 2.1e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF7969 - 0.0089 15.4 0.0 0.015 14.6 0.0 1.4 2 0 0 2 2 2 1 Kinase-like DUF658 PF04936.12 ORF7969 - 0.018 14.8 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF658) CAF-1_p60_C PF15512.6 ORF79581 - 0.12 12.9 4.5 0.13 12.8 3.9 1.3 1 1 0 1 1 1 0 Chromatin assembly factor complex 1 subunit p60, C-terminal RTA1 PF04479.13 ORF79181 - 0.081 12.5 2.4 0.18 11.4 2.4 1.5 1 1 1 2 2 2 0 RTA1 like protein DUF1509 PF07420.11 ORF7846 - 0.11 11.4 3.5 0.13 11.2 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) COP23 PF14218.6 ORF76442 - 0.04 13.7 0.1 0.064 13.0 0.1 1.3 1 0 0 1 1 1 0 Circadian oscillating protein COP23 Trp_syntA PF00290.20 ORF76442 - 0.081 11.8 0.0 0.097 11.5 0.0 1.1 1 0 0 1 1 1 0 Tryptophan synthase alpha chain FHA PF00498.26 ORF76258 - 3e-08 33.9 0.0 5.6e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF76258 - 0.0017 18.7 0.0 0.0023 18.2 0.0 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain DUF1043 PF06295.12 ORF75100 - 2e-47 160.2 0.2 2.2e-47 160.1 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1043) HemX PF04375.14 ORF75100 - 0.0013 18.1 0.1 0.0015 17.9 0.1 1.1 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3958 PF13125.6 ORF75100 - 0.012 15.8 2.2 0.015 15.4 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) Apolipoprotein PF01442.18 ORF75100 - 0.012 15.5 4.0 0.016 15.1 4.0 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain HrpB7 PF09486.10 ORF75100 - 0.027 14.8 2.0 0.035 14.5 2.0 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) KAP PF05804.12 ORF75100 - 0.069 11.3 0.0 0.078 11.1 0.0 1.0 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) MctB PF11382.8 ORF75100 - 0.11 12.2 0.3 0.17 11.5 0.1 1.4 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB DUF2501 PF10696.9 ORF75100 - 0.13 12.5 0.0 0.23 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2501) DUF4514 PF14986.6 ORF75100 - 0.14 12.1 0.6 0.28 11.2 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4514) Phage_holin_3_6 PF07332.11 ORF75100 - 0.16 12.0 0.2 0.3 11.2 0.2 1.5 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3496 PF12001.8 ORF75100 - 0.26 11.7 2.9 13 6.2 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3496) FAM183 PF14886.6 ORF74266 - 9.9e-18 64.9 1.7 1.4e-17 64.4 1.7 1.2 1 0 0 1 1 1 1 FAM183A and FAM183B related Ribosomal_S21 PF01165.20 ORF74266 - 0.049 13.3 0.1 8.2 6.2 0.0 2.3 2 0 0 2 2 2 0 Ribosomal protein S21 CLIP_SPH_mas PF18398.1 ORF73944 - 0.41 11.1 4.0 0.29 11.6 0.5 2.5 1 1 1 2 2 2 0 Clip-domain serine protease homolog masquerade DUF563 PF04577.14 ORF73446 - 7.1e-06 26.3 0.4 1.1e-05 25.7 0.2 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF563) MBOAT PF03062.19 ORF73102 - 1.1e-07 31.6 7.8 1.1e-07 31.6 7.8 1.8 1 1 1 2 2 2 1 MBOAT, membrane-bound O-acyltransferase family UMP1 PF05348.11 ORF72367 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF72367 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein Ribonuc_red_lgC PF02867.15 ORF72168 - 3.9e-09 35.6 0.3 5e-09 35.2 0.3 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain TrbM PF07424.11 ORF72168 - 0.016 15.2 0.2 0.02 14.8 0.2 1.1 1 0 0 1 1 1 0 TrbM GDNF PF02351.16 ORF7174 - 0.033 15.2 1.5 0.033 15.2 1.5 1.8 1 1 0 1 1 1 0 GDNF/GAS1 domain HGTP_anticodon PF03129.20 ORF71704 - 2.8e-25 88.3 1.1 3.7e-25 87.9 1.1 1.1 1 0 0 1 1 1 1 Anticodon binding domain DUF2451 PF10474.9 ORF71704 - 0.094 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2451) MctB PF11382.8 ORF71704 - 0.1 12.3 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB Pesticin PF16754.5 ORF71679 - 0.21 11.5 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin homologue of phage lysozyme, C-term Glyco_trans_2_3 PF13632.6 ORF71452 - 0.036 14.0 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 DUF2674 PF10879.8 ORF6996 - 0.0042 16.6 1.8 0.14 11.7 1.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF2674) PriX PF18689.1 ORF6996 - 0.11 12.8 1.8 0.16 12.3 1.8 1.3 1 0 0 1 1 1 0 Primase X Carb_anhydrase PF00194.21 ORF68955 - 1.7e-12 47.4 0.0 2.3e-12 47.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMIE PF16038.5 ORF68955 - 0.0077 16.1 0.2 0.015 15.1 0.2 1.4 1 0 0 1 1 1 1 TMIE protein TRADD_N PF09034.10 ORF67706 - 0.001 19.1 0.4 0.0014 18.7 0.4 1.3 1 0 0 1 1 1 1 TRADD, N-terminal domain Peptidase_C50 PF03568.17 ORF67706 - 0.013 14.6 1.4 0.014 14.5 1.4 1.0 1 0 0 1 1 1 0 Peptidase family C50 Herpes_UL56 PF04534.12 ORF66733 - 0.052 13.0 6.2 0.046 13.2 5.2 1.4 1 1 0 1 1 1 0 Herpesvirus UL56 protein HR_lesion PF05514.11 ORF65412 - 5.3e-07 29.9 2.4 6.1e-07 29.7 2.4 1.2 1 0 0 1 1 1 1 HR-like lesion-inducing PknG_TPR PF16918.5 ORF64544 - 0.1 11.3 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat IL10 PF00726.17 ORF64544 - 0.13 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Interleukin 10 Tcp11 PF05794.13 ORF64257 - 0.06 12.4 0.0 0.06 12.4 0.0 1.1 1 0 0 1 1 1 0 T-complex protein 11 E1-E2_ATPase PF00122.20 ORF62691 - 9.7 5.7 8.3 39 3.7 8.3 2.0 1 1 0 1 1 1 0 E1-E2 ATPase EF-hand_6 PF13405.6 ORF62469 - 0.023 14.6 0.0 0.4 10.7 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 ORF62469 - 0.033 13.7 0.0 1.1 8.9 0.0 2.3 2 0 0 2 2 2 0 EF hand EF-hand_7 PF13499.6 ORF62469 - 0.15 12.6 1.1 0.33 11.4 0.4 2.0 2 1 0 2 2 2 0 EF-hand domain pair Se-cys_synth_N PF12390.8 ORF62077 - 0.0098 16.1 0.2 0.018 15.3 0.2 1.4 1 0 0 1 1 1 1 Selenocysteine synthase N terminal Ank_4 PF13637.6 ORF60913 - 0.00032 21.2 0.1 0.0015 19.1 0.1 2.0 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF60913 - 0.0037 17.8 0.0 0.0056 17.2 0.0 1.3 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF60913 - 0.0049 17.3 0.3 0.1 13.2 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 ORF60913 - 0.005 17.2 0.2 0.18 12.3 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeat RIIa PF02197.17 ORF60340 - 0.02 14.6 0.2 0.035 13.8 0.2 1.4 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit EF-hand_6 PF13405.6 ORF60340 - 0.021 14.7 0.0 0.074 13.0 0.0 2.0 1 0 0 1 1 1 0 EF-hand domain Ins_allergen_rp PF06757.13 ORF60340 - 0.04 13.9 0.9 0.11 12.5 0.1 1.8 2 0 0 2 2 2 0 Insect allergen related repeat, nitrile-specifier detoxification DNA_pol3_delt_C PF14840.6 ORF60340 - 0.086 13.2 0.2 0.29 11.5 0.1 1.8 1 1 1 2 2 2 0 Processivity clamp loader gamma complex DNA pol III C-term SapB_1 PF05184.15 ORF60340 - 0.17 11.9 0.3 0.17 11.9 0.3 1.9 2 0 0 2 2 2 0 Saposin-like type B, region 1 DUF1842 PF08896.10 ORF59636 - 0.066 13.5 0.0 0.084 13.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1842) ABC_tran PF00005.27 ORF58917 - 1.6e-11 44.8 0.0 1.9e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF58917 - 0.0018 18.2 0.1 0.0018 18.1 0.1 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system CCDC92 PF14916.6 ORF58917 - 0.12 12.2 0.1 0.26 11.1 0.1 1.5 1 0 0 1 1 1 0 Coiled-coil domain of unknown function Ribosomal_L37 PF08561.10 ORF58712 - 0.29 11.6 4.4 5.5 7.5 1.7 2.1 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L37 Pkinase PF00069.25 ORF58671 - 8.1e-06 25.4 0.0 1.2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58671 - 0.081 12.2 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase DASH_Spc34 PF08657.10 ORF58041 - 0.021 14.6 2.4 0.026 14.3 2.4 1.2 1 0 0 1 1 1 0 DASH complex subunit Spc34 Uteroglobin PF01099.17 ORF58041 - 0.085 13.2 0.4 0.33 11.3 0.1 2.2 1 1 0 2 2 2 0 Uteroglobin family AAA_25 PF13481.6 ORF57163 - 0.035 13.7 0.0 0.046 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain DUF1214 PF06742.11 ORF56074 - 3.6e-15 56.3 0.1 4.4e-15 56.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1214) DM13 PF10517.9 ORF56074 - 0.14 12.7 0.0 0.23 12.1 0.0 1.3 1 0 0 1 1 1 0 Electron transfer DM13 Abhydrolase_3 PF07859.13 ORF55870 - 3.2e-07 30.4 0.0 3.7e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Radical_SAM PF04055.21 ORF55870 - 0.019 15.3 0.0 0.023 15.1 0.0 1.2 1 1 0 1 1 1 0 Radical SAM superfamily NUP PF06516.11 ORF55513 - 4.9e-14 52.3 0.0 6.2e-14 51.9 0.0 1.0 1 0 0 1 1 1 1 Purine nucleoside permease (NUP) Ribosomal_L32e PF01655.18 ORF55497 - 9.6e-40 135.4 1.0 1.2e-39 135.1 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L20 PF00453.18 ORF55497 - 0.22 11.6 5.7 0.25 11.4 5.4 1.3 1 1 0 1 1 1 0 Ribosomal protein L20 VPS13 PF16908.5 ORF54591 - 0.044 13.6 0.1 0.05 13.4 0.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting-associated protein 13, N-terminal CENP-M PF11111.8 ORF54591 - 0.098 11.9 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Centromere protein M (CENP-M) Dehydrin PF00257.19 ORF5441 - 4.3 7.9 7.0 6.8 7.2 7.0 1.3 1 0 0 1 1 1 0 Dehydrin MatE PF01554.18 ORF52357 - 0.02 14.5 2.4 0.04 13.6 2.4 1.4 1 0 0 1 1 1 0 MatE ATP-synt_8 PF00895.20 ORF52357 - 0.17 12.3 0.2 0.17 12.3 0.2 2.0 2 0 0 2 2 2 0 ATP synthase protein 8 PsaX PF08078.12 ORF52357 - 9.8 6.2 7.4 1.8 8.6 0.1 2.7 3 0 0 3 3 3 0 PsaX family FHA PF00498.26 ORF51058 - 3e-08 33.9 0.0 5.6e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF51058 - 0.0017 18.7 0.0 0.0023 18.2 0.0 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Sel_put PF04328.13 ORF50848 - 0.75 9.9 18.3 0.25 11.4 4.6 2.5 3 0 0 3 3 3 0 Selenoprotein, putative Say1_Mug180 PF10340.9 ORF50713 - 0.13 11.1 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Steryl acetyl hydrolase PK PF00224.21 ORF50070 - 7.7e-35 120.4 0.0 8.5e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain YajC PF02699.15 ORF50070 - 0.14 12.0 0.0 0.34 10.8 0.0 1.6 2 0 0 2 2 2 0 Preprotein translocase subunit KIAA1430 PF13879.6 ORF50061 - 2.8e-21 76.2 7.2 3.7e-21 75.8 7.2 1.2 1 0 0 1 1 1 1 KIAA1430 homologue PHM7_cyt PF14703.6 ORF50061 - 2 8.7 6.5 6.5 7.0 6.5 1.8 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter OFeT_1 PF16955.5 ORF48862 - 0.073 12.8 0.0 0.096 12.4 0.0 1.1 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter PPDK_N PF01326.19 ORF47876 - 0.0062 15.8 0.1 0.0075 15.6 0.1 1.1 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DUF2674 PF10879.8 ORF47219 - 0.0042 16.6 1.8 0.14 11.7 1.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF2674) PriX PF18689.1 ORF47219 - 0.11 12.8 1.8 0.16 12.3 1.8 1.3 1 0 0 1 1 1 0 Primase X CD225 PF04505.12 ORF47166 - 0.015 15.4 0.5 0.39 10.9 0.0 2.4 2 0 0 2 2 2 0 Interferon-induced transmembrane protein Se-cys_synth_N PF12390.8 ORF46852 - 0.0098 16.1 0.2 0.018 15.3 0.2 1.4 1 0 0 1 1 1 1 Selenocysteine synthase N terminal YebG PF07130.12 ORF45575 - 0.055 13.3 0.9 0.086 12.7 0.9 1.3 1 0 0 1 1 1 0 YebG protein Alba PF01918.21 ORF45575 - 0.067 13.0 0.4 0.13 12.1 0.4 1.5 1 0 0 1 1 1 0 Alba UMP1 PF05348.11 ORF45461 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF45461 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein FGFR3_TM PF18123.1 ORF44358 - 2.8 7.6 9.9 1.6 8.3 2.3 3.0 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain DUF5107 PF17128.4 ORF4241 - 0.079 12.1 0.4 0.095 11.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5107) L71 PF02448.15 ORF40678 - 0.012 16.0 1.9 0.012 16.0 1.9 1.7 2 0 0 2 2 2 0 L71 family MORN PF02493.20 ORF4046 - 2.7e-12 45.8 27.4 4e-08 32.7 2.8 4.2 5 0 0 5 5 5 3 MORN repeat DUF3731 PF12531.8 ORF40256 - 0.095 12.5 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 DNA-K related protein S-AdoMet_synt_C PF02773.16 ORF40256 - 0.14 12.1 0.1 0.2 11.7 0.1 1.2 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain SWIM PF04434.17 ORF39832 - 0.24 11.1 2.5 5.4 6.8 0.1 2.6 2 0 0 2 2 2 0 SWIM zinc finger ComC PF03047.14 ORF38009 - 0.071 12.9 0.1 0.12 12.1 0.1 1.4 1 0 0 1 1 1 0 COMC family Lectin_N PF03954.14 ORF37361 - 0.021 14.6 1.4 0.069 12.9 0.4 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain NAR2 PF16974.5 ORF37361 - 0.15 11.4 1.3 0.24 10.8 1.2 1.3 1 1 0 1 1 1 0 High-affinity nitrate transporter accessory MORN PF02493.20 ORF3688 - 1.3e-17 62.5 11.8 6.6e-06 25.7 0.6 3.6 3 0 0 3 3 3 3 MORN repeat CAP PF00188.26 ORF35423 - 0.0013 19.6 0.0 0.0021 18.9 0.0 1.4 1 1 0 1 1 1 1 Cysteine-rich secretory protein family UQ_con PF00179.26 ORF32160 - 5.1e-37 126.6 0.0 5.6e-37 126.5 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme VPS9 PF02204.18 ORF31306 - 7.7e-14 51.8 0.3 9.6e-14 51.5 0.3 1.1 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain Glyco_trans_2_3 PF13632.6 ORF30591 - 0.036 14.0 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 P_C10 PF14974.6 ORF29936 - 0.0001 22.3 0.7 0.00015 21.8 0.7 1.3 1 0 0 1 1 1 1 Protein C10 MNNL PF07657.13 ORF28518 - 6.5 6.9 9.8 1.6 8.8 1.7 2.3 2 0 0 2 2 2 0 N terminus of Notch ligand UMP1 PF05348.11 ORF27654 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF27654 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein Flg_bbr_C PF06429.13 ORF2737 - 1.8e-12 47.2 1.6 1.8e-12 47.2 1.6 1.7 1 1 1 2 2 2 1 Flagellar basal body rod FlgEFG protein C-terminal Flg_bb_rod PF00460.20 ORF2737 - 1.3e-10 41.0 1.7 1.3e-10 41.0 1.7 1.9 2 0 0 2 2 2 1 Flagella basal body rod protein Ribosomal_L26 PF16906.5 ORF23462 - 4.8e-40 135.9 3.6 6.3e-40 135.5 3.6 1.2 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 ORF23462 - 7.9e-08 32.0 2.0 7.9e-08 32.0 2.0 2.2 2 0 0 2 2 2 1 KOW motif Lipocalin_9 PF17186.4 ORF23462 - 0.053 13.8 0.0 0.061 13.6 0.0 1.4 1 0 0 1 1 1 0 Lipocalin-like domain Methyltrans_RNA PF04452.14 ORF23462 - 0.093 12.1 0.2 0.11 11.8 0.2 1.2 1 0 0 1 1 1 0 RNA methyltransferase DUF1864 PF08933.11 ORF23253 - 0.12 11.1 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1864) EF-hand_1 PF00036.32 ORF22569 - 7.9e-32 106.4 9.9 4.1e-08 32.2 0.3 4.3 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF22569 - 5.7e-27 94.0 2.4 4.6e-14 52.6 0.9 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF22569 - 3e-25 85.9 5.8 2.7e-07 30.0 0.1 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF22569 - 1.1e-22 78.4 7.8 1.8e-07 30.3 0.2 4.3 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF22569 - 6.7e-20 70.7 7.4 8.6e-09 35.1 0.0 4.1 3 1 1 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF22569 - 2.9e-10 40.5 0.2 0.00015 22.0 0.1 2.2 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF22569 - 0.00041 20.3 4.1 0.14 12.1 2.0 3.0 1 1 1 3 3 3 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF22569 - 0.0041 17.4 0.2 0.11 12.9 0.1 2.8 2 2 0 3 3 3 1 EF-hand domain Caleosin PF05042.13 ORF22569 - 0.011 15.6 0.8 4.6 7.1 0.0 3.0 1 1 3 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF22569 - 0.012 15.8 1.5 16 5.8 0.0 3.7 3 1 0 3 3 3 0 Dockerin type I domain EF-hand_13 PF17958.1 ORF22569 - 0.017 14.9 0.0 0.11 12.3 0.0 2.3 2 1 1 3 3 3 0 EF-hand domain TMEM52 PF14979.6 ORF22517 - 0.071 13.0 2.3 0.1 12.5 2.3 1.3 1 0 0 1 1 1 0 Transmembrane 52 TMEM52 PF14979.6 ORF21562 - 0.071 13.0 2.3 0.1 12.5 2.3 1.3 1 0 0 1 1 1 0 Transmembrane 52 Ecm29 PF13001.7 ORF1878 - 0.11 11.2 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 Proteasome stabiliser VPS13 PF16908.5 ORF1820 - 0.044 13.6 0.1 0.05 13.4 0.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting-associated protein 13, N-terminal CENP-M PF11111.8 ORF1820 - 0.098 11.9 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Centromere protein M (CENP-M) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks194.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks194.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks194.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks194.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PknG_TPR PF16918.5 ORF16410 - 0.1 11.3 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat IL10 PF00726.17 ORF16410 - 0.13 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Interleukin 10 NUC130_3NT PF08158.12 ORF16363 - 0.14 12.5 0.9 1.9 8.9 0.4 2.2 2 0 0 2 2 2 0 NUC130/3NT domain KIAA1430 PF13879.6 ORF16355 - 2.8e-21 76.2 7.2 3.7e-21 75.8 7.2 1.2 1 0 0 1 1 1 1 KIAA1430 homologue PHM7_cyt PF14703.6 ORF16355 - 2 8.7 6.5 6.5 7.0 6.5 1.8 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter GLTSCR1 PF15249.6 ORF16139 - 0.027 14.9 0.1 0.098 13.1 0.0 1.8 1 1 1 2 2 2 0 Conserved region of unknown function on GLTSCR protein DUF816 PF05674.12 ORF16139 - 0.055 13.4 4.8 0.068 13.1 4.8 1.2 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF816) DUF5043 PF16446.5 ORF16139 - 0.35 10.9 5.9 0.54 10.2 1.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5043) ADSL_C PF10397.9 ORF15623 - 0.31 11.6 3.9 0.15 12.7 0.9 1.9 2 0 0 2 2 2 0 Adenylosuccinate lyase C-terminus DUF1754 PF08555.10 ORF15623 - 0.34 11.7 18.1 0.5 11.2 18.1 1.3 1 0 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) ALMT PF11744.8 ORF15623 - 5.2 5.8 6.6 5.7 5.7 6.6 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter TBPIP PF07106.13 ORF15579 - 0.1 12.6 0.0 0.24 11.3 0.0 1.7 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain DUF1864 PF08933.11 ORF151779 - 0.12 11.1 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1864) Ank_4 PF13637.6 ORF150068 - 1.6e-06 28.5 0.2 0.087 13.4 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF150068 - 0.00049 20.6 0.3 0.0014 19.1 0.3 1.9 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF150068 - 0.0083 16.6 0.0 8.6 7.3 0.0 2.9 3 1 0 3 3 3 2 Ankyrin repeat Sec62 PF03839.16 ORF149870 - 6 6.3 8.5 9 5.7 8.5 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 Redoxin PF08534.10 ORF148061 - 1.1e-17 64.2 0.0 1.2e-17 64.0 0.0 1.1 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 ORF148061 - 0.0046 16.9 0.0 0.0057 16.6 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Dsh_C PF12316.8 ORF14633 - 0.085 13.3 2.6 0.096 13.1 2.6 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal SURF1 PF02104.15 ORF145906 - 2e-15 57.5 0.0 2.3e-15 57.3 0.0 1.0 1 0 0 1 1 1 1 SURF1 family DUF4028 PF13220.6 ORF14446 - 0.014 15.1 0.3 0.023 14.5 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) DUF1945 PF09178.10 ORF14446 - 0.093 12.9 0.2 0.17 12.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1945) DUF2628 PF10947.8 ORF143915 - 0.082 13.3 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) DUF2541 PF10807.8 ORF143794 - 1.2e-64 216.2 0.8 1.4e-64 216.0 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2541) DUF468 PF04318.12 ORF143626 - 0.15 12.8 1.8 0.45 11.3 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF468) zf-H2C2_2 PF13465.6 ORF142580 - 5.7e-07 29.7 0.5 5.7e-07 29.7 0.5 3.3 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF142580 - 7.8e-07 29.2 12.6 0.00099 19.4 4.7 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF142580 - 0.0005 20.7 10.8 0.015 16.0 4.2 2.7 2 0 0 2 2 2 2 C2H2-type zinc finger GAGA PF09237.11 ORF142580 - 0.0037 17.0 1.2 0.0075 16.0 1.2 1.6 1 1 0 1 1 1 1 GAGA factor zf-C2H2_8 PF15909.5 ORF142580 - 0.0093 16.3 3.9 0.012 15.9 3.9 1.3 1 0 0 1 1 1 1 C2H2-type zinc ribbon ADH_N PF08240.12 ORF142580 - 0.035 14.0 0.2 0.048 13.6 0.2 1.2 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain zf-C2H2_6 PF13912.6 ORF142580 - 0.094 12.8 8.0 3.4 7.8 4.8 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-met PF12874.7 ORF142580 - 1.4 9.5 10.6 0.17 12.3 2.1 3.2 2 1 1 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF142580 - 5.9 7.3 11.7 47 4.4 6.4 3.3 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding FHA PF00498.26 ORF141447 - 3e-08 33.9 0.0 5.6e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF141447 - 0.0017 18.7 0.0 0.0023 18.2 0.0 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Glyco_trans_2_3 PF13632.6 ORF140578 - 0.036 14.0 0.0 0.053 13.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 UMP1 PF05348.11 ORF14040 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF14040 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein EFG_C PF00679.24 ORF139542 - 2.4e-21 75.6 0.0 3.6e-21 75.0 0.0 1.3 1 0 0 1 1 1 1 Elongation factor G C-terminus NAGLU_N PF12971.7 ORF139542 - 0.091 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain PknG_TPR PF16918.5 ORF138143 - 0.1 11.3 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat IL10 PF00726.17 ORF138143 - 0.13 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Interleukin 10 DUF2207 PF09972.9 ORF137886 - 0.36 9.5 5.6 0.38 9.5 5.6 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) YceD PF02620.17 ORF137308 - 0.055 13.6 0.1 0.086 13.0 0.1 1.2 1 0 0 1 1 1 0 Large ribosomal RNA subunit accumulation protein YceD ERGIC_N PF13850.6 ORF136745 - 0.041 14.2 0.3 0.041 14.2 0.3 2.5 2 1 1 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TPR_3 PF07720.12 ORF136745 - 0.21 11.6 0.1 0.21 11.6 0.1 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat DHHC PF01529.20 ORF136745 - 6.2 6.9 19.3 3.5 7.7 11.9 2.0 1 1 1 2 2 2 0 DHHC palmitoyltransferase DUF5110 PF17137.4 ORF135862 - 6.1e-05 23.2 0.5 0.00012 22.2 0.5 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF5110) SLC3A2_N PF16028.5 ORF134327 - 0.41 10.2 3.3 0.94 9.1 3.1 1.7 1 1 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus S_layer_N PF05123.12 ORF134058 - 0.0019 18.1 0.5 0.0021 18.0 0.5 1.0 1 0 0 1 1 1 1 S-layer like family, N-terminal region Ytp1 PF10355.9 ORF133786 - 0.17 11.1 0.1 1.1 8.4 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (Ytp1) DnaA_N PF11638.8 ORF132910 - 0.0063 16.2 0.1 0.018 14.7 0.1 1.8 1 0 0 1 1 1 1 DnaA N-terminal domain Glycoamylase PF10091.9 ORF132910 - 0.098 12.2 1.2 0.13 11.8 1.2 1.1 1 0 0 1 1 1 0 Putative glucoamylase DUF3097 PF11296.8 ORF132060 - 0.068 12.4 0.0 0.078 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3097) FYVE PF01363.21 ORF130931 - 7.7e-09 35.6 9.4 1.1e-08 35.1 9.4 1.4 1 0 0 1 1 1 1 FYVE zinc finger YEATS PF03366.16 ORF130582 - 3.4e-21 75.0 0.1 6.2e-21 74.2 0.1 1.3 1 0 0 1 1 1 1 YEATS family TPR_8 PF13181.6 ORF126768 - 0.027 14.7 2.6 0.86 10.0 0.1 3.0 4 0 0 4 4 4 0 Tetratricopeptide repeat Adeno_E1B_19K PF01691.16 ORF126768 - 0.029 13.9 0.6 0.048 13.2 0.5 1.5 1 1 0 1 1 1 0 Adenovirus E1B 19K protein / small t-antigen SMBP PF16785.5 ORF126768 - 0.037 14.2 3.1 0.29 11.4 0.6 2.3 1 1 1 2 2 2 0 Small metal-binding protein TPR_6 PF13174.6 ORF126768 - 0.06 14.0 0.9 2.3 9.0 0.1 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF126768 - 0.11 12.6 1.4 13 6.2 0.0 2.8 3 1 0 3 3 3 0 Tetratricopeptide repeat kleA_kleC PF17383.2 ORF126768 - 0.25 11.7 8.5 1.5 9.2 1.3 2.9 1 1 1 3 3 3 0 Uncharacterized KorC regulated protein A Gluconate_2-dh3 PF13618.6 ORF126768 - 0.74 10.0 5.2 0.6 10.3 3.7 1.7 1 1 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 DUF1471 PF07338.13 ORF126462 - 1.1e-17 63.7 0.1 2.3e-17 62.7 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) RBR PF17208.3 ORF125812 - 0.028 15.1 9.9 0.028 15.1 9.9 2.1 1 1 1 2 2 2 0 RNA binding Region Ubiquitin_4 PF18036.1 ORF12492 - 0.048 13.7 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-like domain UMP1 PF05348.11 ORF124840 - 1e-10 41.8 1.7 1.2e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF124840 - 0.0027 17.4 0.1 0.003 17.3 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein Endostatin PF06482.11 ORF122266 - 0.15 11.5 3.5 0.19 11.1 3.5 1.1 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin Cerato-platanin PF07249.12 ORF122266 - 0.26 11.4 1.8 0.47 10.6 0.8 1.9 2 1 0 2 2 2 0 Cerato-platanin HR_lesion PF05514.11 ORF12135 - 2.2e-06 27.9 0.8 2.5e-06 27.7 0.8 1.2 1 0 0 1 1 1 1 HR-like lesion-inducing DUF1624 PF07786.12 ORF12135 - 0.024 14.2 0.4 0.028 14.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1624) DUF3392 PF11872.8 ORF120511 - 0.069 13.4 1.2 0.16 12.2 1.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3392) RRM_1 PF00076.22 ORF120043 - 2.1e-20 72.3 0.7 3.8e-20 71.5 0.7 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF120043 - 0.019 15.1 0.1 0.035 14.2 0.1 1.6 1 1 0 1 1 1 0 RNA recognition motif Nup35_RRM PF05172.13 ORF120043 - 0.022 14.7 0.8 0.047 13.6 0.8 1.7 1 1 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Nup35_RRM_2 PF14605.6 ORF120043 - 0.047 13.7 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Peptidase_S9 PF00326.21 ORF119288 - 7.1e-07 28.9 0.0 7.1e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 ORF119288 - 0.00044 20.1 0.0 0.00055 19.8 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 ORF119288 - 0.0031 16.8 0.1 0.0076 15.5 0.0 1.6 1 1 1 2 2 2 1 Serine aminopeptidase, S33 BAAT_C PF08840.11 ORF119288 - 0.0055 16.7 0.0 0.054 13.4 0.0 2.0 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.18 ORF119288 - 0.19 11.2 0.0 0.43 10.1 0.0 1.7 1 1 0 1 1 1 0 Dienelactone hydrolase family HTH_28 PF13518.6 ORF119020 - 0.11 12.7 0.1 0.34 11.1 0.0 1.9 1 1 1 2 2 2 0 Helix-turn-helix domain RTA1 PF04479.13 ORF118986 - 0.081 12.5 2.4 0.18 11.4 2.4 1.5 1 1 1 2 2 2 0 RTA1 like protein SF3a60_bindingd PF12108.8 ORF118650 - 0.11 12.4 0.7 0.11 12.4 0.7 2.5 3 0 0 3 3 3 0 Splicing factor SF3a60 binding domain TMEM52 PF14979.6 ORF117971 - 0.071 13.0 2.3 0.1 12.5 2.3 1.3 1 0 0 1 1 1 0 Transmembrane 52 Colicin-DNase PF12639.7 ORF117047 - 6.4e-06 26.9 0.0 8.1e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 DNase/tRNase domain of colicin-like bacteriocin HNH PF01844.23 ORF117047 - 0.00083 19.5 0.1 0.002 18.3 0.1 1.6 1 0 0 1 1 1 1 HNH endonuclease Pkinase PF00069.25 ORF116880 - 6.7e-09 35.5 2.6 2e-05 24.1 0.7 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF116880 - 0.0037 16.6 0.7 0.075 12.3 0.2 2.1 1 1 0 2 2 2 2 Protein tyrosine kinase Se-cys_synth_N PF12390.8 ORF115748 - 0.0098 16.1 0.2 0.018 15.3 0.2 1.4 1 0 0 1 1 1 1 Selenocysteine synthase N terminal 14-3-3 PF00244.20 ORF114224 - 3.2e-55 187.0 1.2 3.5e-55 186.9 1.2 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF114224 - 0.072 13.1 0.4 0.19 11.7 0.2 1.7 2 0 0 2 2 2 0 Flagellar protein FlaF CD20 PF04103.15 ORF112172 - 0.028 14.5 0.1 0.037 14.1 0.1 1.2 1 0 0 1 1 1 0 CD20-like family AAA_8 PF12780.7 ORF112013 - 0.00052 19.4 0.9 0.00064 19.1 0.9 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 MORN PF02493.20 ORF108221 - 6.9e-19 66.6 28.3 8.1e-07 28.6 1.9 5.5 6 0 0 6 6 6 5 MORN repeat DUF4028 PF13220.6 ORF108160 - 0.014 15.1 0.3 0.023 14.5 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) DUF1945 PF09178.10 ORF108160 - 0.093 12.9 0.2 0.17 12.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1945) Hira PF07569.11 ORF106572 - 0.00035 20.4 0.1 0.00043 20.1 0.1 1.1 1 0 0 1 1 1 1 TUP1-like enhancer of split 4HB_MCP_1 PF12729.7 ORF106572 - 0.0097 15.5 0.6 0.013 15.0 0.6 1.1 1 0 0 1 1 1 1 Four helix bundle sensory module for signal transduction DUF2660 PF10859.8 ORF106572 - 0.042 14.3 0.8 0.11 13.0 0.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2660) DUF3323 PF11796.8 ORF106107 - 0.36 10.7 2.8 0.53 10.1 2.8 1.3 1 0 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) Allexi_40kDa PF05549.11 ORF106107 - 0.38 10.2 8.8 0.47 9.9 8.8 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein KIP1 PF07765.12 ORF106107 - 0.72 10.0 17.3 0.052 13.7 9.0 2.6 1 1 1 2 2 2 0 KIP1-like protein Casc1 PF12366.8 ORF106107 - 3.9 6.9 17.3 0.61 9.6 12.9 1.7 1 1 1 2 2 2 0 Cancer susceptibility candidate 1 RmlD_sub_bind PF04321.17 ORF105480 - 2e-37 128.9 0.0 2.2e-37 128.7 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain MDM1 PF15501.6 ORF104735 - 0.24 10.5 0.1 0.28 10.3 0.1 1.1 1 0 0 1 1 1 0 Nuclear protein MDM1 Sdh_cyt PF01127.22 ORF10357 - 4.3e-31 107.5 4.4 5e-31 107.3 4.4 1.0 1 0 0 1 1 1 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Fumarate_red_D PF02313.17 ORF10357 - 0.023 14.8 4.0 0.035 14.2 4.0 1.4 1 0 0 1 1 1 0 Fumarate reductase subunit D TssN PF17555.2 ORF10357 - 0.42 9.9 4.3 0.21 10.9 2.1 1.5 2 0 0 2 2 2 0 Type VI secretion system, TssN DUF2583 PF10762.9 ORF10357 - 9.7 6.7 9.5 3.5 8.1 0.3 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2583) Penicil_amidase PF01804.18 ORF103539 - 0.00043 19.4 0.1 0.00049 19.2 0.1 1.0 1 0 0 1 1 1 1 Penicillin amidase PknG_TPR PF16918.5 ORF102740 - 0.1 11.3 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat IL10 PF00726.17 ORF102740 - 0.13 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Interleukin 10 zf-HC5HC2H_2 PF13832.6 ORF100376 - 2.5e-06 27.6 4.3 2.5e-06 27.6 4.3 2.0 1 1 1 2 2 2 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 ORF100376 - 7.4e-05 22.9 2.5 7.4e-05 22.9 2.5 2.2 2 1 0 2 2 2 1 PHD-like zinc-binding domain Nudc_N PF14050.6 NODE_47978_length_397_cov_1.806630_g40115_i0forward_frame_1 - 0.011 15.6 0.1 0.027 14.4 0.1 1.6 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. Resolvase PF00239.21 NODE_47976_length_397_cov_1.961326_g40113_i0forward_frame_1 - 0.095 12.8 0.3 0.61 10.2 0.3 1.9 1 1 0 1 1 1 0 Resolvase, N terminal domain UPF0242 PF06785.11 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.0024 18.0 6.0 0.0032 17.6 6.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus CortBP2 PF09727.9 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.043 13.7 6.9 0.053 13.4 6.9 1.1 1 0 0 1 1 1 0 Cortactin-binding protein-2 TPR_MLP1_2 PF07926.12 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.14 12.3 8.9 0.34 11.0 8.1 1.8 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein bZIP_1 PF00170.21 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.2 11.7 5.2 0.38 10.9 1.5 2.3 1 1 1 2 2 2 0 bZIP transcription factor SlyX PF04102.12 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 0.31 11.7 6.1 8.9 7.0 0.1 2.2 1 1 1 2 2 2 0 SlyX DivIC PF04977.15 NODE_47970_length_397_cov_2.469613_g40107_i0forward_frame_1 - 7.7 6.4 8.3 19 5.1 0.2 2.2 1 1 1 2 2 2 0 Septum formation initiator PriA_C PF18074.1 NODE_47967_length_397_cov_2.748619_g40104_i0forward_frame_1 - 0.12 13.2 0.4 0.22 12.4 0.4 1.5 1 1 0 1 1 1 0 Primosomal protein N C-terminal domain SSP160 PF06933.11 NODE_47965_length_397_cov_2.828729_g40102_i0reverse_frame_1 - 0.026 12.8 0.0 0.031 12.5 0.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Aa_trans PF01490.18 NODE_47961_length_397_cov_3.566298_g40098_i0reverse_frame_1 - 2.6e-18 66.0 2.7 2.9e-18 65.8 2.7 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF5624 PF18538.1 NODE_47949_length_397_cov_54.676796_g40086_i0forward_frame_1 - 0.13 12.3 0.3 0.48 10.5 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5624) DUF1180 PF06679.12 NODE_47942_length_397_cov_73.994475_g40079_i0reverse_frame_1 - 4.8 7.6 7.5 4.8 7.6 7.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1180) Herpes_UL32 PF06070.11 NODE_47942_length_397_cov_73.994475_g40079_i0reverse_frame_1 - 6.2 4.4 6.2 6 4.5 6.2 1.1 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 UPF0086 PF01868.16 NODE_47942_length_397_cov_73.994475_g40079_i0forward_frame_1 - 1.9e-19 69.4 0.0 2.1e-19 69.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function UPF0086 CENP-T_C PF15511.6 NODE_47936_length_397_cov_93.726519_g40073_i0forward_frame_1 - 0.11 12.6 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold Tetraspanin PF00335.20 NODE_47928_length_397_cov_126.558011_g40065_i0forward_frame_1 - 0.26 10.9 2.1 0.25 11.0 2.1 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF5374 PF17344.2 NODE_47927_length_397_cov_126.743094_g40064_i0reverse_frame_1 - 0.0092 15.9 2.3 0.017 15.0 2.3 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5374) AAA_lid_7 PF17867.1 NODE_47925_length_397_cov_146.591160_g40062_i0forward_frame_1 - 0.087 13.0 0.8 0.13 12.5 0.8 1.3 1 0 0 1 1 1 0 Midasin AAA lid domain LTV PF04180.14 NODE_47921_length_397_cov_193.845304_g40058_i0forward_frame_1 - 0.048 13.4 21.5 0.055 13.2 21.5 1.0 1 0 0 1 1 1 0 Low temperature viability protein ATHILA PF03078.15 NODE_47921_length_397_cov_193.845304_g40058_i0forward_frame_1 - 0.055 12.3 9.4 0.069 12.0 9.4 1.1 1 0 0 1 1 1 0 ATHILA ORF-1 family DUF4938 PF16292.5 NODE_47921_length_397_cov_193.845304_g40058_i0forward_frame_1 - 0.19 11.0 0.0 0.23 10.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4938) YL1 PF05764.13 NODE_47921_length_397_cov_193.845304_g40058_i0forward_frame_1 - 0.57 10.3 25.2 0.72 9.9 25.2 1.1 1 0 0 1 1 1 0 YL1 nuclear protein Nop14 PF04147.12 NODE_47921_length_397_cov_193.845304_g40058_i0forward_frame_1 - 0.59 8.3 22.6 0.67 8.1 22.6 1.0 1 0 0 1 1 1 0 Nop14-like family Merozoite_SPAM PF07133.11 NODE_47921_length_397_cov_193.845304_g40058_i0forward_frame_1 - 4.2 7.3 27.0 5.4 7.0 27.0 1.2 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) CDC45 PF02724.14 NODE_47921_length_397_cov_193.845304_g40058_i0forward_frame_1 - 4.5 5.4 22.4 5 5.3 22.4 1.0 1 0 0 1 1 1 0 CDC45-like protein MORN_2 PF07661.13 NODE_47919_length_397_cov_222.303867_g40056_i0reverse_frame_1 - 4.6 7.8 14.5 9.1 6.9 2.2 3.8 3 1 0 3 3 3 0 MORN repeat variant Tctex-1 PF03645.13 NODE_47916_length_397_cov_319.577348_g40053_i0forward_frame_1 - 2e-24 85.8 0.2 2.5e-24 85.5 0.2 1.1 1 0 0 1 1 1 1 Tctex-1 family NapE PF06796.11 NODE_47909_length_397_cov_5640.524862_g37710_i2forward_frame_1 - 0.2 11.2 2.3 0.41 10.2 2.3 1.5 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE Curto_V2 PF07325.11 NODE_47903_length_398_cov_1.713499_g40043_i0forward_frame_1 - 1.1 9.1 5.5 1.8 8.5 5.5 1.3 1 0 0 1 1 1 0 Curtovirus V2 protein Papilloma_E5A PF05776.12 NODE_47901_length_398_cov_1.820937_g40041_i0reverse_frame_1 - 0.003 17.9 0.7 0.0052 17.1 0.7 1.3 1 0 0 1 1 1 1 Papillomavirus E5A protein PTS_IIB PF02302.17 NODE_47896_length_398_cov_2.404959_g40036_i0reverse_frame_1 - 3.9e-10 40.3 0.1 5.2e-10 39.9 0.1 1.1 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit TPP_enzyme_M PF00205.22 NODE_47896_length_398_cov_2.404959_g40036_i0reverse_frame_1 - 0.087 12.6 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Jas PF16135.5 NODE_47896_length_398_cov_2.404959_g40036_i0forward_frame_1 - 0.097 12.9 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling HyaE PF07449.11 NODE_47889_length_398_cov_5.154270_g40029_i0reverse_frame_1 - 0.036 14.0 0.0 0.044 13.7 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE MFS_1_like PF12832.7 NODE_47884_length_398_cov_56.360882_g40024_i0forward_frame_1 - 0.016 14.1 0.4 0.021 13.7 0.4 1.2 1 0 0 1 1 1 0 MFS_1 like family Opy2 PF09463.10 NODE_47881_length_398_cov_73.008264_g40021_i0forward_frame_1 - 0.097 13.0 2.9 0.19 12.0 2.9 1.4 1 0 0 1 1 1 0 Opy2 protein Suv3_N PF18114.1 NODE_47880_length_398_cov_74.275482_g40020_i0forward_frame_1 - 0.058 13.5 0.1 0.11 12.7 0.1 1.5 1 0 0 1 1 1 0 Suv3 helical N-terminal domain RCC1_2 PF13540.6 NODE_47874_length_398_cov_94.515152_g40014_i0forward_frame_1 - 1.5e-05 24.6 0.1 0.077 12.8 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Shisa PF13908.6 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 0.021 15.1 0.1 0.025 14.8 0.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Neur_chan_memb PF02932.16 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 0.032 14.3 1.6 0.037 14.1 1.6 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region SID-1_RNA_chan PF13965.6 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 0.064 11.7 3.1 0.069 11.6 3.1 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF3051 PF11252.8 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 0.065 12.9 0.0 0.083 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3051) DUF4834 PF16118.5 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_1 - 8.6 7.4 12.1 30 5.6 12.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) SYCP2_ARLD PF18581.1 NODE_47866_length_398_cov_138.275482_g40006_i0reverse_frame_1 - 0.028 14.4 0.3 0.051 13.6 0.1 1.5 2 0 0 2 2 2 0 Synaptonemal complex 2 armadillo-repeat-like domain ZIP4_domain PF18292.1 NODE_47858_length_398_cov_202.319559_g39998_i0forward_frame_1 - 0.02 14.8 0.4 0.024 14.5 0.4 1.2 1 0 0 1 1 1 0 Zinc transporter ZIP4 domain DUF3051 PF11252.8 NODE_47858_length_398_cov_202.319559_g39998_i0forward_frame_1 - 0.075 12.7 0.0 0.084 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3051) Peptidase_S10 PF00450.22 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 1.8e-06 27.6 0.1 2.4e-06 27.2 0.1 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase EGF_2 PF07974.13 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 0.00086 19.6 17.3 0.00086 19.6 17.3 1.9 2 0 0 2 2 2 1 EGF-like domain EGF_Tenascin PF18720.1 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 0.0089 16.1 7.7 0.018 15.1 7.7 1.5 1 0 0 1 1 1 1 Tenascin EGF domain Baculo_LEF-2 PF03041.14 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 0.011 15.4 0.3 0.014 15.1 0.3 1.2 1 0 0 1 1 1 0 lef-2 EB PF01683.18 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 0.027 14.8 11.8 0.063 13.6 11.8 1.7 1 1 0 1 1 1 0 EB module hEGF PF12661.7 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 0.034 14.8 10.5 0.034 14.8 10.5 2.4 3 0 0 3 3 3 0 Human growth factor-like EGF I-EGF_1 PF18372.1 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 0.2 11.8 10.9 0.48 10.6 10.9 1.7 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 EGF_alliinase PF04863.13 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 0.59 10.6 10.7 1.8 9.0 10.1 2.0 1 1 0 1 1 1 0 Alliinase EGF-like domain Toxin_2 PF00451.19 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 1.6 9.1 11.5 3.8 7.9 11.5 1.7 1 1 0 1 1 1 0 Scorpion short toxin, BmKK2 EGF PF00008.27 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_1 - 9.3 6.7 19.9 0.12 12.7 12.3 1.8 2 0 0 2 2 2 0 EGF-like domain PFEMP PF03011.15 NODE_47841_length_399_cov_2.112637_g39983_i0forward_frame_1 - 0.15 12.8 3.7 0.21 12.2 3.7 1.2 1 0 0 1 1 1 0 PFEMP DBL domain Trehalase PF01204.18 NODE_47829_length_399_cov_2.969780_g39971_i0reverse_frame_1 - 4.8e-46 157.7 2.6 5.2e-46 157.5 2.6 1.0 1 0 0 1 1 1 1 Trehalase OppC_N PF12911.7 NODE_47818_length_399_cov_8.282967_g39961_i0forward_frame_1 - 1.9 8.5 9.7 2 8.5 0.6 3.4 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C DAGK_acc PF00609.19 NODE_47817_length_399_cov_33.252747_g39960_i0reverse_frame_1 - 0.21 11.9 0.0 0.26 11.6 0.0 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase accessory domain MTCP1 PF08991.10 NODE_47810_length_399_cov_62.750000_g39953_i0forward_frame_1 - 3.9 7.8 9.8 1.5 9.2 2.6 2.3 2 0 0 2 2 2 0 Mature-T-Cell Proliferation I type CUTL PF16557.5 NODE_47806_length_399_cov_83.692308_g39949_i0reverse_frame_1 - 0.004 17.3 0.1 0.0074 16.4 0.1 1.4 1 0 0 1 1 1 1 CUT1-like DNA-binding domain of SATB Saf_2TM PF18303.1 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_1 - 0.0069 16.0 0.5 0.0086 15.7 0.5 1.1 1 0 0 1 1 1 1 SAVED-fused 2TM effector domain DUSP PF06337.12 NODE_47792_length_399_cov_111.936813_g39935_i0reverse_frame_1 - 0.069 13.8 0.4 0.097 13.3 0.4 1.4 1 1 0 1 1 1 0 DUSP domain zf-H2C2_2 PF13465.6 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 2.9e-13 49.6 22.8 1.7e-09 37.6 1.6 4.0 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 3.3e-12 46.1 20.5 3.3e-06 27.3 0.8 3.2 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 2.2e-11 43.6 19.4 0.00018 22.0 0.6 3.2 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_8 PF15909.5 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.0023 18.2 3.1 0.0023 18.2 3.1 2.1 1 1 1 2 2 2 2 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.013 15.2 4.7 0.12 12.1 1.7 2.4 2 0 0 2 2 2 0 zinc-finger C2H2-type BolA PF01722.18 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.03 14.6 0.3 0.062 13.6 0.1 1.6 2 0 0 2 2 1 0 BolA-like protein zf-met PF12874.7 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.051 14.0 0.8 0.051 14.0 0.8 3.2 3 0 0 3 3 3 0 Zinc-finger of C2H2 type Desulfoferrod_N PF06397.12 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.063 12.9 4.6 1.5 8.5 0.6 2.3 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain TFIIS_C PF01096.18 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.25 11.2 0.2 0.25 11.2 0.2 3.0 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) zf-C2H2_jaz PF12171.8 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.26 11.6 12.8 1.6 9.1 0.2 3.4 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding FOXP-CC PF16159.5 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.26 11.9 5.2 13 6.5 0.2 3.0 1 1 2 3 3 3 0 FOXP coiled-coil domain zf_ZIC PF18366.1 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 0.32 11.1 7.7 1.2 9.3 0.1 3.1 1 1 2 3 3 3 0 Zic proteins zinc finger domain zf-C2H2_7 PF15269.6 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 1.2 9.2 10.6 1.1 9.4 0.3 2.4 1 1 1 2 2 2 0 Zinc-finger C1_4 PF07975.12 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 1.3 9.4 7.4 4.5 7.6 1.1 2.4 1 1 1 2 2 2 0 TFIIH C1-like domain zf-H2C2_5 PF13909.6 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 1.3 8.8 24.1 2 8.3 3.9 4.0 3 2 0 3 3 3 0 C2H2-type zinc-finger domain Zn_ribbon_SprT PF17283.2 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 1.5 8.8 11.7 1.8 8.5 0.3 2.9 3 0 0 3 3 3 0 SprT-like zinc ribbon domain FYVE PF01363.21 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 2.3 8.4 8.8 1.8 8.8 5.7 2.0 1 1 1 2 2 2 0 FYVE zinc finger zf-C2H2_6 PF13912.6 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 4 7.5 17.4 2.4 8.2 0.5 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger zf-BED PF02892.15 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 5.8 7.0 18.2 2.9 8.0 1.9 3.2 1 1 2 3 3 3 0 BED zinc finger Zf_RING PF16744.5 NODE_47781_length_399_cov_272.837912_g39924_i0reverse_frame_1 - 9.2 6.5 8.3 2.5 8.3 4.0 2.1 2 1 1 3 3 2 0 KIAA1045 RING finger SR-25 PF10500.9 NODE_47775_length_399_cov_5926.554945_g39919_i0reverse_frame_1 - 0.097 12.3 7.7 0.23 11.0 2.2 2.1 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein DUF2478 PF10649.9 NODE_47775_length_399_cov_5926.554945_g39919_i0forward_frame_1 - 0.11 12.1 0.6 0.69 9.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2478) zf_PR_Knuckle PF18445.1 NODE_47771_length_400_cov_1.424658_g39915_i0reverse_frame_3 - 0.03 14.1 0.2 0.03 14.1 0.2 2.0 2 0 0 2 2 2 0 PR zinc knuckle motif BRI3BP PF14965.6 NODE_47771_length_400_cov_1.424658_g39915_i0reverse_frame_2 - 0.022 14.3 13.4 0.031 13.8 3.1 2.1 1 1 1 2 2 2 0 Negative regulator of p53/TP53 DUF5455 PF17537.2 NODE_47771_length_400_cov_1.424658_g39915_i0forward_frame_3 - 0.022 15.2 0.4 0.032 14.6 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5455) Fibrillarin PF01269.17 NODE_47771_length_400_cov_1.424658_g39915_i0forward_frame_3 - 0.086 11.9 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Fibrillarin FAO_M PF16350.5 NODE_47771_length_400_cov_1.424658_g39915_i0forward_frame_3 - 0.21 12.0 0.0 0.34 11.3 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase central domain Ni_hydr_CYTB PF01292.20 NODE_47767_length_400_cov_1.876712_g39911_i0reverse_frame_3 - 1.5e-07 31.2 7.5 1.9e-07 30.9 7.5 1.1 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4293 PF14126.6 NODE_47767_length_400_cov_1.876712_g39911_i0reverse_frame_3 - 0.042 14.1 2.1 0.047 13.9 0.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4293) Rz1 PF06085.11 NODE_47767_length_400_cov_1.876712_g39911_i0reverse_frame_3 - 0.1 12.3 1.3 0.17 11.7 1.3 1.3 1 0 0 1 1 1 0 Lipoprotein Rz1 precursor Staph_haemo PF05480.11 NODE_47765_length_400_cov_2.043836_g39909_i0forward_frame_3 - 0.2 11.4 0.1 0.32 10.8 0.1 1.3 1 0 0 1 1 1 0 Staphylococcus haemolytic protein FLYWCH PF04500.16 NODE_47765_length_400_cov_2.043836_g39909_i0forward_frame_2 - 4.4 7.5 8.6 4 7.6 0.7 2.5 2 1 0 2 2 2 0 FLYWCH zinc finger domain HofP PF10748.9 NODE_47761_length_400_cov_2.295890_g39905_i0reverse_frame_2 - 0.31 10.6 1.1 0.47 10.0 1.1 1.2 1 0 0 1 1 1 0 DNA utilization proteins HofP BCCT PF02028.17 NODE_47757_length_400_cov_2.476712_g39901_i0reverse_frame_3 - 1.3e-29 103.1 8.8 1.3e-29 103.0 8.8 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter Hexapep PF00132.24 NODE_47752_length_400_cov_3.265753_g39896_i0reverse_frame_3 - 1.1e-16 59.8 11.1 3.2e-10 39.3 6.3 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 NODE_47752_length_400_cov_3.265753_g39896_i0reverse_frame_3 - 6.6e-11 41.8 12.5 3.4e-08 33.1 4.4 3.3 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Mac PF12464.8 NODE_47752_length_400_cov_3.265753_g39896_i0reverse_frame_3 - 1.3e-05 25.3 0.0 3.6e-05 23.9 0.0 1.7 2 0 0 2 2 2 1 Maltose acetyltransferase PDZ_6 PF17820.1 NODE_47751_length_400_cov_3.624658_g39895_i0forward_frame_3 - 1.5e-13 50.3 0.1 2.2e-13 49.9 0.1 1.3 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 NODE_47751_length_400_cov_3.624658_g39895_i0forward_frame_3 - 5.8e-10 39.4 0.0 9.1e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 NODE_47751_length_400_cov_3.624658_g39895_i0forward_frame_3 - 6.6e-09 36.0 0.0 9.7e-09 35.4 0.0 1.2 1 0 0 1 1 1 1 PDZ domain Peptidase_M50 PF02163.22 NODE_47751_length_400_cov_3.624658_g39895_i0forward_frame_3 - 7.6e-05 22.1 0.0 7.9e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M50 Tricorn_PDZ PF14685.6 NODE_47751_length_400_cov_3.624658_g39895_i0forward_frame_3 - 0.0029 17.5 0.1 0.0061 16.5 0.0 1.5 2 0 0 2 2 2 1 Tricorn protease PDZ domain Cytochrom_C550 PF14495.6 NODE_47750_length_400_cov_3.684932_g39894_i0forward_frame_3 - 0.088 12.5 0.1 0.17 11.6 0.1 1.4 1 0 0 1 1 1 0 Cytochrome c-550 domain Yae1_N PF09811.9 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_3 - 0.00017 21.2 30.4 0.29 10.8 0.9 4.6 3 1 0 3 3 3 1 Essential protein Yae1, N terminal DUF1467 PF07330.12 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_3 - 0.13 12.3 0.3 0.49 10.3 0.0 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1467) Presenilin PF01080.17 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_3 - 0.21 10.3 2.5 0.22 10.3 2.5 1.1 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_3 - 0.56 8.9 12.4 0.65 8.7 12.4 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Yae1_N PF09811.9 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_2 - 0.075 12.8 25.9 0.12 12.1 1.9 4.9 1 1 2 3 3 3 0 Essential protein Yae1, N terminal DUF2201_N PF13203.6 NODE_47744_length_400_cov_54.057534_g39888_i0reverse_frame_2 - 0.4 10.2 5.8 0.41 10.2 5.8 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain ThrE PF06738.12 NODE_47744_length_400_cov_54.057534_g39888_i0forward_frame_3 - 0.16 11.3 0.7 0.19 11.0 0.7 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter AAA_13 PF13166.6 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.00015 20.6 9.7 0.00017 20.4 9.7 1.0 1 0 0 1 1 1 1 AAA domain MIF4G_like_2 PF09090.11 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.0057 16.2 0.9 0.0065 16.0 0.9 1.1 1 0 0 1 1 1 1 MIF4G like GPS2_interact PF15784.5 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.027 14.9 0.6 0.027 14.9 0.6 2.1 1 1 1 2 2 2 0 G-protein pathway suppressor 2-interacting domain IL5 PF02025.15 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.03 14.6 0.9 0.069 13.4 0.9 1.5 1 0 0 1 1 1 0 Interleukin 5 CPSase_L_D3 PF02787.19 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.04 14.3 1.4 0.05 14.0 1.4 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TMPIT PF07851.13 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.21 10.8 3.9 0.25 10.6 3.9 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF948 PF06103.11 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.3 11.4 1.3 1.2 9.5 1.3 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DivIC PF04977.15 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 0.89 9.4 7.7 2 8.2 4.6 2.4 1 1 1 2 2 2 0 Septum formation initiator MtrG PF04210.13 NODE_47734_length_400_cov_90.794521_g39879_i0forward_frame_3 - 4.5 7.2 5.0 1.8 8.5 0.2 2.4 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G Ribosomal_L40e PF01020.17 NODE_47732_length_400_cov_98.435616_g39877_i0forward_frame_2 - 2.7e-30 104.0 11.5 3.9e-30 103.5 11.5 1.3 1 0 0 1 1 1 1 Ribosomal L40e family ubiquitin PF00240.23 NODE_47732_length_400_cov_98.435616_g39877_i0forward_frame_2 - 3.6e-10 39.4 0.1 5.6e-10 38.8 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_47732_length_400_cov_98.435616_g39877_i0forward_frame_2 - 0.021 14.7 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like ABC_tran_CTD PF16326.5 NODE_47729_length_400_cov_139.369863_g39874_i0forward_frame_3 - 2.7e-08 34.0 9.7 2.7e-08 34.0 9.7 1.8 1 1 1 2 2 2 1 ABC transporter C-terminal domain DUF2913 PF11140.8 NODE_47728_length_400_cov_148.046575_g39873_i0reverse_frame_3 - 0.0012 18.6 0.3 0.0018 18.0 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2913) DUF2730 PF10805.8 NODE_47728_length_400_cov_148.046575_g39873_i0reverse_frame_3 - 0.025 14.7 0.4 0.044 13.9 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) FlaC_arch PF05377.11 NODE_47728_length_400_cov_148.046575_g39873_i0reverse_frame_3 - 0.27 11.6 5.0 0.15 12.5 1.4 2.3 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) EOS1 PF12326.8 NODE_47726_length_400_cov_207.290411_g39871_i0forward_frame_3 - 0.22 11.4 5.5 0.087 12.8 2.2 1.8 2 0 0 2 2 2 0 N-glycosylation protein DUF4773 PF15998.5 NODE_47726_length_400_cov_207.290411_g39871_i0forward_frame_2 - 0.057 14.0 0.7 0.072 13.6 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4773) GST_N_3 PF13417.6 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 1.2e-08 35.2 0.0 2e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 1.9e-05 24.9 0.0 2.9e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 0.00021 21.5 0.0 0.00029 21.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Tom37 PF10568.9 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 0.003 17.9 0.0 0.0037 17.6 0.0 1.1 1 0 0 1 1 1 1 Outer mitochondrial membrane transport complex protein GST_N_4 PF17172.4 NODE_47702_length_401_cov_2.412568_g39848_i0forward_frame_3 - 0.044 14.5 0.0 0.055 14.2 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain DUF999 PF06198.11 NODE_47700_length_401_cov_2.467213_g39846_i0forward_frame_3 - 0.083 12.9 1.2 0.096 12.7 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF999) Ku PF02735.16 NODE_47698_length_401_cov_2.931694_g39844_i0forward_frame_2 - 2.8e-10 40.2 1.8 5.5e-10 39.3 0.6 1.8 1 1 1 2 2 2 1 Ku70/Ku80 beta-barrel domain MCC-bdg_PDZ PF10506.9 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.021 14.8 0.3 0.04 13.9 0.3 1.4 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF1664 PF07889.12 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.088 12.8 3.4 0.13 12.3 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.13 12.8 8.0 0.15 12.6 8.0 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region AKNA PF12443.8 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.41 11.3 6.1 0.27 11.9 3.8 1.8 1 1 1 2 2 2 0 AT-hook-containing transcription factor V_ATPase_I PF01496.19 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.6 8.0 9.2 0.64 7.9 9.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family XhlA PF10779.9 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 0.77 10.0 8.3 0.21 11.8 4.8 1.9 1 1 2 3 3 3 0 Haemolysin XhlA DUF4337 PF14235.6 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_3 - 2.2 8.4 7.2 2.8 8.0 7.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) RD3 PF14473.6 NODE_47688_length_401_cov_64.267760_g39834_i0reverse_frame_2 - 0.0022 17.9 0.6 0.0028 17.5 0.6 1.1 1 0 0 1 1 1 1 RD3 protein zf-RRPl_C4 PF17026.5 NODE_47688_length_401_cov_64.267760_g39834_i0forward_frame_3 - 0.0091 16.1 1.9 0.015 15.4 1.9 1.4 1 0 0 1 1 1 1 Putative ribonucleoprotein zinc-finger pf C4 type SRP_SPB PF02978.19 NODE_47687_length_401_cov_67.202186_g39833_i0reverse_frame_3 - 0.6 10.8 6.8 0.84 10.3 6.3 1.5 1 1 0 1 1 1 0 Signal peptide binding domain DUF434 PF04256.12 NODE_47687_length_401_cov_67.202186_g39833_i0reverse_frame_2 - 0.0083 15.8 0.1 0.015 14.9 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF434) DUF1844 PF08899.11 NODE_47686_length_401_cov_68.415301_g39832_i0reverse_frame_3 - 0.18 12.1 0.0 5.4 7.4 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1844) Enterotoxin_ST PF02048.16 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_3 - 0.17 12.4 14.4 0.71 10.4 5.2 2.4 2 0 0 2 2 2 0 Heat-stable enterotoxin ST Disintegrin PF00200.23 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_3 - 5.8 7.8 14.0 6.2 7.7 4.7 2.4 1 1 1 2 2 2 0 Disintegrin dUTPase PF00692.19 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_2 - 0.012 15.3 0.0 0.04 13.6 0.0 1.9 1 1 0 1 1 1 0 dUTPase FXMR_C2 PF16098.5 NODE_47686_length_401_cov_68.415301_g39832_i0forward_frame_2 - 0.04 14.4 0.0 0.056 13.9 0.0 1.2 1 0 0 1 1 1 0 Fragile X-related mental retardation protein C-terminal region 2 Trypan_PARP PF05887.11 NODE_47680_length_401_cov_74.199454_g39826_i0reverse_frame_2 - 0.34 10.9 5.4 0.43 10.6 5.4 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF4666 PF15697.5 NODE_47680_length_401_cov_74.199454_g39826_i0reverse_frame_2 - 5.6 7.7 10.5 1 10.0 6.0 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4666) DUF4834 PF16118.5 NODE_47679_length_401_cov_75.961749_g39825_i0forward_frame_2 - 0.93 10.5 6.2 1.6 9.7 6.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) 7TM_GPCR_Srx PF10328.9 NODE_47674_length_401_cov_85.404372_g39820_i0forward_frame_3 - 0.013 15.2 6.7 0.016 14.9 6.7 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srx RseC_MucC PF04246.12 NODE_47674_length_401_cov_85.404372_g39820_i0forward_frame_3 - 0.016 15.1 0.2 0.022 14.7 0.2 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC YWFCY PF14293.6 NODE_47674_length_401_cov_85.404372_g39820_i0forward_frame_3 - 0.22 11.9 3.1 0.17 12.2 1.4 1.7 1 1 0 1 1 1 0 YWFCY protein DUF775 PF05603.12 NODE_47674_length_401_cov_85.404372_g39820_i0forward_frame_2 - 1.1e-13 51.2 0.3 1.2e-13 51.0 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF775) Defensin_2 PF01097.18 NODE_47671_length_401_cov_90.346995_g39817_i0forward_frame_2 - 0.12 12.3 9.7 0.33 10.9 0.9 2.4 2 0 0 2 2 2 0 Arthropod defensin ERGIC_N PF13850.6 NODE_47670_length_401_cov_90.718579_g39816_i0forward_frame_2 - 0.059 13.7 0.1 0.081 13.3 0.1 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4535 PF15054.6 NODE_47668_length_401_cov_92.655738_g39814_i0reverse_frame_2 - 0.0026 17.5 0.6 0.0087 15.8 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4535) Mit_KHE1 PF10173.9 NODE_47668_length_401_cov_92.655738_g39814_i0reverse_frame_2 - 4.8 7.2 8.1 3.2e+02 1.3 8.1 2.0 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Ank_2 PF12796.7 NODE_47667_length_401_cov_95.538251_g39813_i0reverse_frame_3 - 5.3e-19 68.6 0.0 4.5e-13 49.6 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_47667_length_401_cov_95.538251_g39813_i0reverse_frame_3 - 6.2e-16 58.0 0.5 1.5e-05 25.2 0.0 4.0 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 NODE_47667_length_401_cov_95.538251_g39813_i0reverse_frame_3 - 1.3e-15 57.2 0.3 2e-07 31.1 0.1 3.1 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_47667_length_401_cov_95.538251_g39813_i0reverse_frame_3 - 8.9e-13 48.5 0.0 6.2e-06 26.7 0.0 2.9 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_47667_length_401_cov_95.538251_g39813_i0reverse_frame_3 - 1.9e-09 36.9 0.6 0.0071 16.8 0.0 4.0 5 0 0 5 5 5 2 Ankyrin repeat PhoD_N PF16655.5 NODE_47667_length_401_cov_95.538251_g39813_i0reverse_frame_3 - 0.037 14.6 0.0 0.11 13.0 0.0 1.7 2 0 0 2 2 2 0 PhoD-like phosphatase, N-terminal domain OGFr_III PF04680.13 NODE_47667_length_401_cov_95.538251_g39813_i0reverse_frame_2 - 4.6 8.0 8.3 12 6.6 0.1 3.1 3 0 0 3 3 3 0 Opioid growth factor receptor repeat AAA_6 PF12774.7 NODE_47662_length_401_cov_129.786885_g39808_i0reverse_frame_2 - 8e-44 149.9 0.0 9.4e-44 149.7 0.0 1.0 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region LicD PF04991.13 NODE_47660_length_401_cov_132.030055_g39806_i0reverse_frame_2 - 0.41 10.8 11.2 0.53 10.4 11.2 1.1 1 0 0 1 1 1 0 LicD family CDC45 PF02724.14 NODE_47660_length_401_cov_132.030055_g39806_i0reverse_frame_2 - 3.4 5.9 15.3 3.9 5.6 15.3 1.0 1 0 0 1 1 1 0 CDC45-like protein Myco_arth_vir_N PF09610.10 NODE_47655_length_401_cov_168.773224_g39801_i0reverse_frame_2 - 0.12 12.5 2.1 0.18 11.9 2.1 1.2 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) SpoIIP PF07454.11 NODE_47655_length_401_cov_168.773224_g39801_i0reverse_frame_2 - 1.1 8.7 7.2 1.4 8.3 7.2 1.1 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) tRNA_anti-like PF12869.7 NODE_47647_length_402_cov_1.193460_g39793_i0reverse_frame_3 - 0.048 13.3 0.1 0.063 12.9 0.1 1.1 1 0 0 1 1 1 0 tRNA_anti-like Mistic PF11458.8 NODE_47643_length_402_cov_1.651226_g39789_i0forward_frame_2 - 0.097 12.7 0.6 0.14 12.1 0.6 1.2 1 0 0 1 1 1 0 Membrane-integrating protein Mistic DUF3461 PF11944.8 NODE_47641_length_402_cov_1.768392_g39787_i0reverse_frame_2 - 0.071 13.2 0.6 0.32 11.1 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3461) DUF1981 PF09324.10 NODE_47639_length_402_cov_1.809264_g39785_i0reverse_frame_3 - 0.095 12.6 4.6 0.52 10.2 0.6 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF1981) DUF2000 PF09391.10 NODE_47636_length_402_cov_1.956403_g39782_i0forward_frame_3 - 0.081 12.8 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2000) TPR_MLP1_2 PF07926.12 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.0026 17.8 2.7 0.0034 17.4 2.7 1.2 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein AAA_13 PF13166.6 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.012 14.3 2.0 0.014 14.0 2.0 1.1 1 0 0 1 1 1 0 AAA domain DUF5082 PF16888.5 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.025 14.9 1.1 0.055 13.7 0.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) FAM184 PF15665.5 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.031 14.1 1.5 0.036 13.8 1.5 1.1 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B UDPGT PF00201.18 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.034 12.9 0.1 0.037 12.8 0.1 1.0 1 0 0 1 1 1 0 UDP-glucoronosyl and UDP-glucosyl transferase Phage_GP20 PF06810.11 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.051 13.4 1.3 0.11 12.3 1.3 1.6 1 1 0 1 1 1 0 Phage minor structural protein GP20 DUF2408 PF10303.9 NODE_47635_length_402_cov_1.961853_g39781_i0forward_frame_3 - 0.12 12.9 1.1 0.18 12.3 1.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) UPF0052 PF01933.18 NODE_47634_length_402_cov_2.043597_g39780_i0forward_frame_2 - 0.0031 16.8 1.0 0.0037 16.6 1.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 Bystin PF05291.11 NODE_47634_length_402_cov_2.043597_g39780_i0forward_frame_2 - 0.1 11.8 0.2 0.11 11.7 0.2 1.1 1 0 0 1 1 1 0 Bystin Lys PF00062.20 NODE_47630_length_402_cov_2.637602_g39776_i0reverse_frame_3 - 0.13 12.5 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 C-type lysozyme/alpha-lactalbumin family E3_UbLigase_RBR PF18091.1 NODE_47624_length_402_cov_3.049046_g39770_i0reverse_frame_3 - 0.14 12.3 4.9 0.25 11.5 4.9 1.5 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain Ipi1_N PF12333.8 NODE_47624_length_402_cov_3.049046_g39770_i0forward_frame_3 - 0.042 14.5 0.1 0.069 13.8 0.1 1.3 1 0 0 1 1 1 0 Rix1 complex component involved in 60S ribosome maturation DUF1266 PF06889.11 NODE_47622_length_402_cov_3.196185_g39768_i0forward_frame_2 - 2.3e-20 73.4 1.0 2.9e-20 73.1 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1266) UPF0524 PF15823.5 NODE_47622_length_402_cov_3.196185_g39768_i0forward_frame_2 - 0.017 14.6 0.0 0.025 14.0 0.0 1.4 1 1 0 1 1 1 0 UPF0524 of C3orf70 DUF1580 PF07618.11 NODE_47621_length_402_cov_3.204360_g39767_i0reverse_frame_3 - 0.05 13.2 0.1 0.1 12.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) TPR_20 PF14561.6 NODE_47619_length_402_cov_3.348774_g39765_i0reverse_frame_3 - 0.031 14.6 0.9 0.19 12.0 0.1 2.4 2 2 1 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_47619_length_402_cov_3.348774_g39765_i0reverse_frame_3 - 0.061 13.0 0.5 0.2 11.4 0.0 2.2 3 0 0 3 3 3 0 TPR repeat FAP PF07174.11 NODE_47618_length_402_cov_3.367847_g39764_i0reverse_frame_2 - 0.0035 16.9 9.0 0.0041 16.6 9.0 1.0 1 0 0 1 1 1 1 Fibronectin-attachment protein (FAP) INO80_Ies4 PF08193.11 NODE_47618_length_402_cov_3.367847_g39764_i0reverse_frame_2 - 0.03 14.3 5.9 0.039 14.0 5.9 1.2 1 0 0 1 1 1 0 INO80 complex subunit Ies4 SOBP PF15279.6 NODE_47618_length_402_cov_3.367847_g39764_i0reverse_frame_2 - 0.03 14.9 1.6 0.033 14.8 1.6 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein Velvet PF11754.8 NODE_47618_length_402_cov_3.367847_g39764_i0reverse_frame_2 - 0.046 13.7 0.3 0.049 13.6 0.3 1.1 1 0 0 1 1 1 0 Velvet factor Pheromone PF08015.11 NODE_47618_length_402_cov_3.367847_g39764_i0reverse_frame_2 - 0.26 12.4 5.8 50 5.0 5.8 2.3 1 1 0 1 1 1 0 Fungal mating-type pheromone Hamartin PF04388.12 NODE_47618_length_402_cov_3.367847_g39764_i0reverse_frame_2 - 0.31 9.7 1.8 0.31 9.7 1.8 1.0 1 0 0 1 1 1 0 Hamartin protein MSA-2c PF12238.8 NODE_47618_length_402_cov_3.367847_g39764_i0reverse_frame_2 - 3.9 7.4 7.4 5.1 7.0 7.4 1.3 1 0 0 1 1 1 0 Merozoite surface antigen 2c # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks195.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks195.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks195.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks195.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:09:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf_C2HC_14 PF18574.1 NODE_47615_length_402_cov_4.626703_g39761_i0reverse_frame_3 - 0.16 11.8 1.0 0.24 11.2 1.0 1.2 1 0 0 1 1 1 0 C2HC Zing finger domain Fer4_7 PF12838.7 NODE_47615_length_402_cov_4.626703_g39761_i0reverse_frame_2 - 0.093 13.3 1.7 0.14 12.8 1.7 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain zf-H2C2_5 PF13909.6 NODE_47615_length_402_cov_4.626703_g39761_i0forward_frame_3 - 0.22 11.3 0.2 0.38 10.5 0.2 1.4 1 0 0 1 1 1 0 C2H2-type zinc-finger domain DndE PF08870.11 NODE_47614_length_402_cov_5.049046_g39760_i0reverse_frame_3 - 0.024 14.9 0.1 0.032 14.5 0.1 1.2 1 0 0 1 1 1 0 DNA sulphur modification protein DndE NS3_envE PF02723.14 NODE_47614_length_402_cov_5.049046_g39760_i0forward_frame_2 - 3.5 7.8 13.2 19 5.4 13.1 2.1 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E SH3BP5 PF05276.14 NODE_47613_length_402_cov_9.465940_g39759_i0reverse_frame_2 - 0.013 15.3 0.0 0.015 15.1 0.0 1.1 1 0 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) JTB PF05439.12 NODE_47612_length_402_cov_16.722071_g39758_i0forward_frame_3 - 0.3 11.1 8.7 0.12 12.4 6.3 1.5 1 1 1 2 2 2 0 Jumping translocation breakpoint protein (JTB) T6SS_HCP PF05638.12 NODE_47610_length_402_cov_46.681199_g39756_i0reverse_frame_3 - 0.019 15.4 0.4 0.026 14.9 0.4 1.2 1 0 0 1 1 1 0 Type VI secretion system effector, Hcp Ion_trans PF00520.31 NODE_47607_length_402_cov_59.705722_g39753_i0reverse_frame_3 - 0.15 11.3 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Ion transport protein Solute_trans_a PF03619.16 NODE_47607_length_402_cov_59.705722_g39753_i0forward_frame_3 - 1e-05 25.2 0.0 1.3e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Organic solute transporter Ostalpha DUF997 PF06196.12 NODE_47601_length_402_cov_65.850136_g39747_i0forward_frame_2 - 0.044 13.8 0.5 0.044 13.8 0.5 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF997) EDR1 PF14381.6 NODE_47597_length_402_cov_72.822888_g39743_i0reverse_frame_3 - 0.19 11.4 0.1 0.27 10.9 0.1 1.3 1 0 0 1 1 1 0 Ethylene-responsive protein kinase Le-CTR1 DUF2070 PF09843.9 NODE_47596_length_402_cov_77.806540_g39742_i0reverse_frame_3 - 0.35 9.1 8.9 0.39 8.9 8.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ArAE_2_N PF10337.9 NODE_47596_length_402_cov_77.806540_g39742_i0reverse_frame_3 - 4.4 6.2 6.8 6.1 5.8 6.8 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal Med13_C PF06333.12 NODE_47596_length_402_cov_77.806540_g39742_i0forward_frame_3 - 0.23 10.7 3.4 0.25 10.6 3.4 1.0 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain zf-GRF PF06839.12 NODE_47593_length_402_cov_82.168937_g39739_i0reverse_frame_2 - 2.7e-13 49.8 9.2 9.4e-13 48.0 2.0 2.6 3 0 0 3 3 3 2 GRF zinc finger DZR PF12773.7 NODE_47593_length_402_cov_82.168937_g39739_i0forward_frame_2 - 0.012 15.6 1.4 0.055 13.5 1.4 2.0 1 1 0 1 1 1 0 Double zinc ribbon zf-TFIIB PF13453.6 NODE_47593_length_402_cov_82.168937_g39739_i0forward_frame_2 - 0.57 9.5 4.2 0.58 9.5 0.2 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger DUF3930 PF13067.6 NODE_47586_length_402_cov_114.899183_g39732_i0forward_frame_2 - 0.37 11.1 0.3 0.37 11.1 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3930) APA3_viroporin PF11289.8 NODE_47576_length_402_cov_322.288828_g39722_i0reverse_frame_2 - 3.8 7.0 11.5 4.1 6.9 11.3 1.3 1 1 0 1 1 1 0 Coronavirus accessory protein 3a Silic_transp PF03842.13 NODE_47576_length_402_cov_322.288828_g39722_i0forward_frame_2 - 0.0041 15.5 3.8 0.005 15.2 3.8 1.0 1 0 0 1 1 1 1 Silicon transporter SCAMP PF04144.13 NODE_47569_length_402_cov_9620.828338_g39717_i0forward_frame_2 - 0.025 14.9 0.8 0.032 14.5 0.8 1.1 1 0 0 1 1 1 0 SCAMP family Polysacc_synt PF01943.17 ORF99029 - 5.9e-05 22.6 13.6 6.3e-05 22.5 13.6 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein YqhR PF11085.8 ORF99029 - 0.025 14.5 9.4 0.033 14.1 9.0 1.4 1 1 0 1 1 1 0 Conserved membrane protein YqhR DUF2484 PF10658.9 ORF99029 - 0.073 13.4 3.3 0.15 12.3 3.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2484) MatE PF01554.18 ORF99029 - 0.26 10.9 12.2 0.035 13.7 8.5 1.5 2 0 0 2 2 2 0 MatE WD40_alt PF14077.6 ORF97981 - 0.032 14.1 0.1 0.067 13.1 0.1 1.5 1 0 0 1 1 1 0 Alternative WD40 repeat motif S_layer_N PF05123.12 ORF97478 - 0.0011 18.9 0.3 0.0012 18.7 0.3 1.0 1 0 0 1 1 1 1 S-layer like family, N-terminal region DUF2024 PF09630.10 ORF96808 - 0.0079 16.1 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2024) DUF5447 PF17525.2 ORF96658 - 0.35 11.4 5.2 0.52 10.8 5.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5447) SIX1_SD PF16878.5 ORF96369 - 0.00071 20.1 0.3 0.0032 18.0 0.1 1.9 1 1 1 2 2 2 1 Transcriptional regulator, SIX1, N-terminal SD domain DUF1677 PF07911.13 ORF96369 - 0.058 13.8 0.5 3.3 8.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1677) Vps36-NZF-N PF16988.5 ORF96369 - 0.13 11.7 0.1 0.18 11.2 0.1 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Response_reg PF00072.24 ORF95841 - 2.1e-19 69.7 0.5 2.4e-19 69.5 0.5 1.0 1 0 0 1 1 1 1 Response regulator receiver domain HflK_N PF12221.8 ORF94677 - 0.053 13.5 0.0 0.16 12.0 0.0 1.8 1 0 0 1 1 1 0 Bacterial membrane protein N terminal YGGT PF02325.17 ORF94633 - 0.22 12.0 4.3 0.38 11.2 4.3 1.4 1 0 0 1 1 1 0 YGGT family Kazal_2 PF07648.15 ORF94404 - 0.029 14.5 2.5 0.87 9.8 0.4 3.0 2 1 0 2 2 2 0 Kazal-type serine protease inhibitor domain HEPN_SAV_6107 PF18726.1 ORF92426 - 1.2 9.7 6.9 0.96 10.0 0.1 2.2 2 0 0 2 2 2 0 SAV_6107-like HEPN Endonuc-HincII PF09226.11 ORF9197 - 0.068 12.5 0.0 0.08 12.2 0.0 1.3 1 0 0 1 1 1 0 Restriction endonuclease HincII HIG_1_N PF04588.13 ORF91913 - 0.07 13.4 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 Hypoxia induced protein conserved region CcmD PF04995.14 ORF91054 - 7.4e-16 58.0 2.9 7.4e-16 58.0 2.9 1.9 1 1 1 2 2 2 1 Heme exporter protein D (CcmD) TssO PF17561.2 ORF8943 - 0.066 13.3 10.5 0.48 10.5 0.2 2.4 1 1 1 2 2 2 0 Type VI secretion system, TssO LMBR1 PF04791.16 ORF8943 - 3.7 6.3 6.7 3.6 6.4 6.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Isochorismatase PF00857.20 ORF8924 - 8e-32 110.8 0.0 8.6e-32 110.7 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family DDE_3 PF13358.6 ORF89146 - 0.03 14.1 0.0 0.063 13.0 0.0 1.6 1 0 0 1 1 1 0 DDE superfamily endonuclease zf-C2H2_aberr PF17017.5 ORF89106 - 0.23 11.6 3.1 1.3 9.1 3.1 1.8 1 1 0 1 1 1 0 Aberrant zinc-finger OATP PF03137.20 ORF87447 - 5.2 5.2 9.3 6.4 4.9 9.3 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family S4 PF01479.25 ORF87338 - 1.4e-11 43.9 0.0 2.5e-11 43.1 0.0 1.5 1 0 0 1 1 1 1 S4 domain DUF5582 PF17819.1 ORF86086 - 0.001 19.5 0.5 0.0018 18.7 0.5 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5582) DUF5586 PF17824.1 ORF86086 - 0.0016 17.7 0.0 0.002 17.3 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5586) EF-hand_6 PF13405.6 ORF86086 - 0.0063 16.4 3.1 0.14 12.2 0.0 2.7 2 1 0 2 2 2 1 EF-hand domain TssR PF17643.1 ORF86086 - 0.076 10.9 0.8 0.082 10.8 0.8 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssR TRP PF06011.12 ORF85678 - 2.6e-05 23.2 1.2 2.9e-05 23.0 1.2 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF565 PF04483.12 ORF85678 - 0.093 13.3 0.7 0.66 10.6 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF565) MatE PF01554.18 ORF83947 - 0.0086 15.8 1.6 0.011 15.4 0.8 1.4 1 1 0 1 1 1 1 MatE zf_UBZ PF18439.1 ORF83947 - 0.28 10.8 0.1 0.4 10.3 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger S_layer_N PF05123.12 ORF83743 - 0.04 13.8 0.3 0.046 13.6 0.3 1.1 1 0 0 1 1 1 0 S-layer like family, N-terminal region Viral_Beta_CD PF04530.12 ORF81492 - 0.39 11.0 1.7 0.51 10.6 0.6 1.7 2 0 0 2 2 2 0 Viral Beta C/D like family Spem1 PF15670.5 ORF81155 - 0.076 12.6 9.2 0.11 12.0 9.2 1.2 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF2195 PF09961.9 ORF80983 - 0.0089 16.0 0.1 0.014 15.3 0.1 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2195) SurA_N_2 PF13623.6 ORF80983 - 0.011 15.6 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 SurA N-terminal domain SecE PF00584.20 ORF79972 - 7.1e-20 70.7 1.2 7.1e-20 70.7 1.2 2.7 3 0 0 3 3 3 1 SecE/Sec61-gamma subunits of protein translocation complex S1FA PF04689.13 ORF79972 - 0.25 11.5 0.2 0.25 11.5 0.2 1.8 2 0 0 2 2 2 0 DNA binding protein S1FA HisKA PF00512.25 ORF79920 - 0.00021 21.2 0.0 0.00038 20.4 0.0 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain DUF223 PF02721.14 ORF79920 - 0.011 16.0 0.4 0.017 15.4 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF223 LRAT PF04970.13 ORF79707 - 0.00038 20.8 0.0 0.00053 20.3 0.0 1.3 1 0 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 ORF79707 - 0.0053 16.6 1.5 0.014 15.2 1.5 1.7 1 1 0 1 1 1 1 PPPDE putative peptidase domain TBPIP PF07106.13 ORF79323 - 0.1 12.6 0.0 0.24 11.4 0.0 1.7 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain Ribosomal_L39 PF00832.20 ORF78981 - 0.059 13.0 3.0 0.059 13.0 3.0 1.6 2 0 0 2 2 2 0 Ribosomal L39 protein AAA_9 PF12781.7 ORF78914 - 0.0078 15.4 0.2 0.0086 15.2 0.2 1.2 1 0 0 1 1 1 1 ATP-binding dynein motor region Ribosomal_L5_C PF00673.21 ORF78552 - 9.3e-23 80.2 0.0 1.1e-22 80.0 0.0 1.1 1 0 0 1 1 1 1 ribosomal L5P family C-terminus HTH_ABP1_N PF18107.1 ORF78552 - 0.039 13.7 0.2 0.093 12.5 0.0 1.7 2 0 0 2 2 2 0 Fission yeast centromere protein N-terminal domain PLAT PF01477.23 ORF7559 - 0.056 14.0 0.4 0.44 11.1 0.2 2.0 1 1 1 2 2 2 0 PLAT/LH2 domain AFP_2 PF18815.1 ORF7559 - 0.2 11.9 0.9 0.38 11.0 0.4 1.7 1 1 0 1 1 1 0 Bacterial antifreeze protein repeat FlaF PF07309.11 ORF74467 - 0.011 15.7 0.8 0.017 15.1 0.3 1.6 2 0 0 2 2 2 0 Flagellar protein FlaF Ribosomal_L18A PF01775.17 ORF74074 - 1.3e-29 102.8 5.4 1.3e-29 102.8 5.4 1.6 2 0 0 2 2 2 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A YtfJ_HI0045 PF09695.10 ORF74074 - 0.0012 18.5 0.6 0.0015 18.2 0.6 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (YtfJ_HI0045) DUF2887 PF11103.8 ORF74074 - 0.0095 16.0 0.1 0.011 15.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2887) L31 PF09784.9 ORF74074 - 0.19 12.2 3.5 0.17 12.3 2.8 1.4 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L31 Glutaredoxin PF00462.24 ORF74015 - 2.7e-14 53.1 0.2 4e-14 52.6 0.2 1.3 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 ORF74015 - 0.00012 22.4 0.0 0.00018 21.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF74015 - 0.0014 18.9 0.0 0.0021 18.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain VIT PF08487.10 ORF74 - 2.1e-17 63.4 0.3 2.5e-17 63.1 0.3 1.1 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VIT_2 PF13757.6 ORF74 - 0.017 15.0 0.0 0.26 11.2 0.1 2.1 2 0 0 2 2 2 0 Vault protein inter-alpha-trypsin domain DUF3208 PF11482.8 ORF73972 - 0.14 12.5 0.0 0.42 10.9 0.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3208) Ank_2 PF12796.7 ORF73379 - 0.00025 21.6 0.0 0.00048 20.6 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF73379 - 0.0022 18.6 0.0 0.0043 17.6 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF73379 - 0.021 15.3 0.0 4.4 8.2 0.0 2.7 2 0 0 2 2 2 0 Ankyrin repeat DUF3224 PF11528.8 ORF73104 - 0.028 14.2 0.1 0.04 13.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3224) RdRP_5 PF07925.11 ORF72362 - 0.027 11.9 0.2 0.031 11.7 0.2 1.0 1 0 0 1 1 1 0 Reovirus RNA-dependent RNA polymerase lambda 3 UTP15_C PF09384.10 ORF72362 - 0.039 13.6 2.4 0.059 13.0 2.3 1.4 1 1 0 1 1 1 0 UTP15 C terminal ERGIC_N PF13850.6 ORF71839 - 0.011 16.1 0.2 0.017 15.5 0.2 1.4 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF2841 PF11001.8 ORF71761 - 0.015 15.3 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2841) Sbt_1 PF05982.12 ORF7150 - 0.58 9.3 4.2 0.64 9.2 4.2 1.1 1 0 0 1 1 1 0 Na+-dependent bicarbonate transporter superfamily Sulfatase PF00884.23 ORF69970 - 1.5e-15 57.4 0.2 1.6e-15 57.3 0.2 1.1 1 0 0 1 1 1 1 Sulfatase Peptidase_S49_N PF08496.10 ORF69963 - 0.42 10.7 1.3 0.52 10.4 1.3 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF3959 PF13105.6 ORF69963 - 4.7 6.6 7.4 5.5 6.4 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Papilin_u7 PF16626.5 ORF69355 - 0.11 13.1 1.6 0.23 12.0 0.2 2.0 2 0 0 2 2 2 0 Linking region between Kunitz_BPTI and I-set on papilin Methyltransf_16 PF10294.9 ORF6750 - 5.3e-25 88.1 0.0 6.2e-25 87.9 0.0 1.0 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_25 PF13649.6 ORF6750 - 0.00081 20.0 0.0 0.0013 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF6750 - 0.0042 17.8 0.0 0.0061 17.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF6750 - 0.0074 15.9 0.0 0.0092 15.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Sensor_TM1 PF13755.6 ORF6750 - 0.03 14.0 0.0 0.088 12.6 0.0 1.7 2 0 0 2 2 2 0 Sensor N-terminal transmembrane domain Met_10 PF02475.16 ORF6750 - 0.037 13.8 0.0 0.042 13.6 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein PrmA PF06325.13 ORF6750 - 0.24 10.8 0.0 0.27 10.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Endonuc-HincII PF09226.11 ORF67154 - 0.068 12.5 0.0 0.08 12.2 0.0 1.3 1 0 0 1 1 1 0 Restriction endonuclease HincII D_CNTX PF17492.2 ORF66425 - 3.9 7.7 10.2 1.7 8.9 2.6 2.4 2 0 0 2 2 2 0 Delta Ctenitoxins zf-C2H2_2 PF12756.7 ORF65448 - 0.00025 21.3 0.1 0.00033 20.9 0.1 1.2 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 ORF65448 - 0.0027 18.4 1.1 0.0056 17.4 1.1 1.5 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF65448 - 0.037 14.5 1.2 0.065 13.7 1.2 1.4 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 ORF65448 - 0.047 13.7 3.1 0.084 12.9 3.1 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF65448 - 0.05 13.9 0.5 0.086 13.1 0.5 1.4 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding DUF629 PF04780.12 ORF65448 - 0.22 10.0 0.4 0.3 9.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF629) Elf1 PF05129.13 ORF65448 - 4.9 7.3 7.6 0.16 12.0 1.6 1.6 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like Glyco_hydro_4C PF11975.8 ORF62411 - 0.13 12.4 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase C-terminal domain Bromodomain PF00439.25 ORF61612 - 4.7e-17 61.8 0.1 7.2e-17 61.2 0.1 1.3 1 0 0 1 1 1 1 Bromodomain PcfK PF14058.6 ORF61612 - 0.031 14.6 0.8 0.71 10.2 0.0 2.1 2 0 0 2 2 2 0 PcfK-like protein NiFe-hyd_HybE PF11939.8 ORF61612 - 0.12 12.3 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 [NiFe]-hydrogenase assembly, chaperone, HybE Pox_A14 PF05767.12 ORF60957 - 9.2 6.5 8.6 9.6 6.4 1.8 2.1 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 Euplotes_phero PF05842.11 ORF60827 - 0.068 13.7 0.6 0.068 13.7 0.6 1.5 2 0 0 2 2 2 0 Euplotes octocarinatus mating pheromone protein TFIIF_alpha PF05793.12 ORF60827 - 0.48 9.0 6.7 0.56 8.7 6.7 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) CC PF04942.14 ORF60755 - 0.42 10.8 2.5 11 6.4 0.4 2.5 2 1 0 2 2 2 0 CC domain FtsK_gamma PF09397.10 ORF59906 - 0.018 14.8 0.0 15 5.5 0.0 3.1 3 0 0 3 3 3 0 Ftsk gamma domain Albumin_I PF08027.11 ORF59906 - 0.042 13.5 1.0 18 5.0 0.0 3.1 3 0 0 3 3 3 0 Albumin I chain b S10_plectin PF03501.15 ORF59809 - 3.1e-34 116.9 0.1 3.7e-34 116.7 0.1 1.1 1 0 0 1 1 1 1 Plectin/S10 domain VIT PF08487.10 ORF58200 - 2.1e-17 63.4 0.3 2.5e-17 63.1 0.3 1.1 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VIT_2 PF13757.6 ORF58200 - 0.017 15.0 0.0 0.26 11.2 0.1 2.1 2 0 0 2 2 2 0 Vault protein inter-alpha-trypsin domain FlbT PF07378.11 ORF58036 - 0.027 14.5 0.1 0.041 14.0 0.1 1.5 1 1 0 1 1 1 0 Flagellar protein FlbT SCF PF02404.15 ORF55981 - 0.062 12.6 3.1 0.073 12.4 3.1 1.1 1 0 0 1 1 1 0 Stem cell factor Stevor PF17410.2 ORF55981 - 2.2 7.8 8.2 1.1 8.7 6.0 1.6 1 1 1 2 2 2 0 Subtelomeric Variable Open Reading frame DUF3950 PF13132.6 ORF55981 - 6.3 6.6 5.9 1.2 9.0 1.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3950) P22_AR_N PF10547.9 ORF55718 - 0.047 14.0 0.1 0.069 13.5 0.1 1.3 1 0 0 1 1 1 0 P22_AR N-terminal domain TGT PF01702.18 ORF55718 - 0.064 12.4 0.1 0.073 12.2 0.1 1.2 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase DUF166 PF02593.14 ORF55718 - 0.14 11.7 0.8 0.36 10.3 0.8 1.7 1 1 0 1 1 1 0 Domain of unknown function MFS_1 PF07690.16 ORF55284 - 4.2e-06 25.9 0.1 1.3e-05 24.3 0.0 1.7 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF55284 - 3.5e-05 22.9 0.1 4.1e-05 22.6 0.1 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_4 PF06779.14 ORF55284 - 0.033 13.5 0.1 0.038 13.3 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB JSRP PF15312.6 ORF55110 - 0.53 10.2 3.6 15 5.6 0.2 2.3 2 0 0 2 2 2 0 Junctional sarcoplasmic reticulum protein S_layer_N PF05123.12 ORF54167 - 0.0074 16.2 0.4 0.008 16.1 0.4 1.0 1 0 0 1 1 1 1 S-layer like family, N-terminal region zf-NADH-PPase PF09297.11 ORF53154 - 0.011 15.3 0.3 0.011 15.3 0.3 2.1 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Spp-24 PF07448.11 ORF52789 - 0.11 12.6 2.6 2.8 8.2 0.0 2.6 2 1 0 2 2 2 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain DUF4551 PF15087.6 ORF5091 - 5.6 5.7 8.2 6.6 5.4 8.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) Pex14_N PF04695.13 ORF5091 - 7.1 7.3 10.4 4.7 7.9 8.0 1.7 1 1 1 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DZR PF12773.7 ORF5026 - 1.5 8.9 12.1 8 6.6 1.5 3.2 1 1 1 2 2 2 0 Double zinc ribbon DUF1803 PF08820.10 ORF50130 - 0.011 15.8 0.8 0.018 15.0 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1803) RFC1 PF08519.12 ORF50130 - 0.17 12.1 6.8 0.2 11.8 6.8 1.3 1 1 0 1 1 1 0 Replication factor RFC1 C terminal domain IGPD PF00475.18 ORF49537 - 3.2e-19 69.7 1.1 3.7e-19 69.5 1.1 1.0 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase MOR2-PAG1_N PF14222.6 ORF45940 - 0.051 12.5 0.0 0.053 12.5 0.0 1.1 1 0 0 1 1 1 0 Cell morphogenesis N-terminal 60KD_IMP PF02096.20 ORF45940 - 0.61 10.0 3.8 0.24 11.3 1.2 1.7 2 0 0 2 2 2 0 60Kd inner membrane protein Sugar_tr PF00083.24 ORF45940 - 0.71 8.7 7.9 0.82 8.5 7.9 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter DUF4685 PF15737.5 ORF45897 - 0.096 13.1 0.0 0.15 12.5 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4685) potato_inhibit PF00280.18 ORF4363 - 0.074 13.7 0.0 0.13 13.0 0.0 1.4 1 0 0 1 1 1 0 Potato inhibitor I family PD40 PF07676.12 ORF41440 - 0.031 14.2 0.0 0.058 13.4 0.0 1.4 1 0 0 1 1 1 0 WD40-like Beta Propeller Repeat AFG1_ATPase PF03969.16 ORF41440 - 0.053 12.4 0.2 0.14 11.0 0.0 1.6 1 1 1 2 2 2 0 AFG1-like ATPase Pkinase PF00069.25 ORF4097 - 3e-15 56.3 0.0 3.8e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF4097 - 0.00059 19.2 0.0 0.00083 18.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_Tyr PF07714.17 ORF4097 - 0.0011 18.4 0.1 0.0014 18.0 0.1 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2977 PF11192.8 ORF40605 - 0.053 13.7 0.2 0.11 12.6 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2977) DUF3209 PF11483.8 ORF40499 - 0.054 13.9 0.5 0.054 13.9 0.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3209) Pro_racemase PF05544.11 ORF40499 - 0.058 12.4 1.3 0.065 12.3 1.3 1.2 1 0 0 1 1 1 0 Proline racemase UPF0172 PF03665.13 ORF40499 - 0.46 10.5 8.8 0.6 10.1 8.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) DUF2333 PF10095.9 ORF40499 - 0.65 9.0 7.2 0.53 9.2 6.2 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2333) Ndc1_Nup PF09531.10 ORF40499 - 6.3 5.4 6.9 7.2 5.2 6.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Stealth_CR4 PF17103.5 ORF40321 - 0.042 13.7 0.0 0.087 12.7 0.0 1.6 1 0 0 1 1 1 0 Stealth protein CR4, conserved region 4 Katanin_con80 PF13925.6 ORF39627 - 3e-15 56.6 0.0 3.6e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 con80 domain of Katanin K-cyclin_vir_C PF09080.10 ORF38370 - 0.12 12.8 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 K cyclin, C terminal MerT PF02411.15 ORF37334 - 0.0037 17.3 2.1 0.0068 16.4 2.0 1.5 1 1 1 2 2 2 1 MerT mercuric transport protein DUF2024 PF09630.10 ORF37224 - 0.0079 16.1 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2024) PsbH PF00737.20 ORF36405 - 3.9 7.3 8.7 0.18 11.5 1.8 2.2 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein Arena_ncap_C PF17290.2 ORF35973 - 0.043 13.2 0.2 0.066 12.5 0.2 1.3 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain JSRP PF15312.6 ORF35784 - 0.53 10.2 3.6 15 5.6 0.2 2.3 2 0 0 2 2 2 0 Junctional sarcoplasmic reticulum protein Elf1 PF05129.13 ORF35465 - 0.0016 18.5 0.5 0.0026 17.8 0.5 1.4 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like TFIIS_C PF01096.18 ORF35465 - 0.0027 17.5 6.6 0.071 13.0 1.5 2.5 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) DUF5419 PF17441.2 ORF35465 - 0.069 13.3 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5419) Zn_Tnp_IS1 PF03811.13 ORF35465 - 0.47 10.2 3.0 1.6 8.5 0.3 2.2 2 0 0 2 2 2 0 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF35465 - 0.48 10.4 4.3 4.9 7.2 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF35465 - 1.9 8.5 6.3 4.9 7.2 6.3 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain WD40 PF00400.32 ORF34728 - 1.7e-05 25.5 0.2 0.048 14.6 0.1 2.7 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF34728 - 0.0028 17.9 0.0 0.075 13.3 0.0 2.5 1 1 2 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF34728 - 0.01 14.5 0.0 0.011 14.4 0.0 1.1 1 0 0 1 1 1 0 Nucleoporin Nup120/160 Cytochrom_D1 PF02239.16 ORF34728 - 0.024 13.2 0.0 0.027 13.0 0.0 1.1 1 0 0 1 1 1 0 Cytochrome D1 heme domain DCA16 PF15349.6 ORF34214 - 0.004 16.8 1.0 0.0046 16.6 1.0 1.1 1 0 0 1 1 1 1 DDB1- and CUL4-associated factor 16 zf-LITAF-like PF10601.9 ORF33962 - 2.5e-10 40.5 8.7 3.5e-10 40.0 8.7 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DZR PF12773.7 ORF33962 - 0.00083 19.3 8.0 0.0027 17.7 0.9 2.3 2 0 0 2 2 2 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF33962 - 0.04 14.7 8.6 8.7 7.2 9.4 2.4 1 1 1 2 2 2 0 zinc-ribbon family Ribosomal_L31 PF01197.18 ORF33962 - 0.067 13.4 1.5 0.1 12.8 0.4 1.8 2 0 0 2 2 2 0 Ribosomal protein L31 zinc-ribbons_6 PF07191.12 ORF33962 - 0.071 13.1 8.5 0.15 12.1 8.5 1.5 1 1 0 1 1 1 0 zinc-ribbons Mut7-C PF01927.16 ORF33962 - 0.087 12.9 2.0 0.12 12.5 2.0 1.2 1 0 0 1 1 1 0 Mut7-C RNAse domain zf-UDP PF14569.6 ORF33962 - 0.19 11.9 5.2 7.9 6.7 0.1 2.4 2 0 0 2 2 2 0 Zinc-binding RING-finger HNH_5 PF14279.6 ORF33962 - 0.22 11.4 7.3 0.73 9.7 0.2 2.5 2 1 0 2 2 2 0 HNH endonuclease zinc_ribbon_2 PF13240.6 ORF33962 - 0.25 11.1 0.4 0.25 11.1 0.4 2.9 4 0 0 4 4 4 0 zinc-ribbon domain eIF-5_eIF-2B PF01873.17 ORF33962 - 0.62 10.0 6.0 0.24 11.3 1.8 2.1 2 0 0 2 2 2 0 Domain found in IF2B/IF5 Tnp_zf-ribbon_2 PF13842.6 ORF33962 - 0.75 10.7 10.0 8 7.4 3.4 2.6 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon TssO PF17561.2 ORF31585 - 0.066 13.3 10.5 0.48 10.5 0.2 2.4 1 1 1 2 2 2 0 Type VI secretion system, TssO LMBR1 PF04791.16 ORF31585 - 3.7 6.3 6.7 3.6 6.4 6.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Gar1 PF04410.14 ORF31198 - 5.4e-12 45.7 0.2 6.7e-12 45.5 0.2 1.2 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region SBP_bac_5 PF00496.22 ORF29724 - 0.015 14.2 1.0 0.021 13.8 1.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle Caleosin PF05042.13 ORF29724 - 0.018 15.0 0.7 0.022 14.7 0.7 1.4 1 1 0 1 1 1 0 Caleosin related protein PLDc_2 PF13091.6 ORF28685 - 0.00015 21.7 0.1 0.00018 21.4 0.1 1.2 1 0 0 1 1 1 1 PLD-like domain PLDc PF00614.22 ORF28685 - 0.0026 17.9 1.3 0.0056 16.8 1.3 1.6 1 0 0 1 1 1 1 Phospholipase D Active site motif Virulence_RhuM PF13310.6 ORF28685 - 0.088 12.0 0.0 0.12 11.6 0.0 1.3 1 1 0 1 1 1 0 Virulence protein RhuM family DUF1077 PF06417.12 ORF28089 - 4.7e-19 68.5 5.5 6.9e-19 68.0 5.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1077) Sulfatase PF00884.23 ORF2799 - 2.7e-13 50.0 0.2 2.8e-13 49.9 0.2 1.1 1 0 0 1 1 1 1 Sulfatase ubiquitin PF00240.23 ORF25643 - 2.2e-33 113.8 0.9 3.1e-33 113.3 0.9 1.2 1 0 0 1 1 1 1 Ubiquitin family Ribosomal_L40e PF01020.17 ORF25643 - 4.5e-26 90.5 12.0 6.9e-26 89.9 12.0 1.3 1 0 0 1 1 1 1 Ribosomal L40e family Rad60-SLD PF11976.8 ORF25643 - 9.6e-16 57.4 1.4 1.4e-15 56.9 1.4 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF25643 - 3e-05 24.4 0.2 0.00011 22.5 0.2 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF25643 - 0.0038 17.1 0.1 0.0051 16.7 0.1 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF25643 - 0.007 16.5 0.0 0.015 15.4 0.0 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF25643 - 0.0071 16.4 1.3 1.7 8.7 0.2 2.2 2 0 0 2 2 2 2 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF25643 - 0.0081 16.5 0.1 0.014 15.7 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF25643 - 0.018 15.6 0.1 0.018 15.6 0.1 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF2870 PF11069.8 ORF25643 - 0.071 13.5 0.0 0.16 12.4 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2870) zinc_ribbon_2 PF13240.6 ORF25643 - 1.4 8.7 4.9 0.89 9.4 0.3 2.8 3 0 0 3 3 3 0 zinc-ribbon domain JSRP PF15312.6 ORF24378 - 0.53 10.2 3.6 15 5.6 0.2 2.3 2 0 0 2 2 2 0 Junctional sarcoplasmic reticulum protein zf-C2H2_4 PF13894.6 ORF23261 - 4.8e-06 27.0 7.0 0.0058 17.4 2.8 2.7 2 0 0 2 2 2 2 C2H2-type zinc finger zf-met PF12874.7 ORF23261 - 0.019 15.3 1.1 6.1 7.4 0.9 2.7 2 0 0 2 2 2 0 Zinc-finger of C2H2 type C1_4 PF07975.12 ORF23261 - 0.021 15.1 3.1 0.042 14.1 3.0 1.6 1 1 0 1 1 1 0 TFIIH C1-like domain zf-C2H2_12 PF18658.1 ORF23261 - 0.046 13.3 1.4 0.081 12.5 1.4 1.4 1 0 0 1 1 1 0 Zinc-finger C2H2-type zf_UBZ PF18439.1 ORF23261 - 0.096 12.3 0.7 0.096 12.3 0.7 2.8 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-H2C2_2 PF13465.6 ORF23261 - 0.11 13.0 5.1 0.54 10.8 2.2 2.7 2 0 0 2 2 2 0 Zinc-finger double domain zf-HIT PF04438.16 ORF23261 - 0.25 11.3 4.6 0.76 9.7 1.4 2.5 2 0 0 2 2 2 0 HIT zinc finger zf-C2H2_2 PF12756.7 ORF23261 - 0.25 11.7 7.0 4.2 7.8 4.3 2.1 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 ORF23261 - 0.6 10.5 4.4 7.9 6.9 0.0 2.4 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 ORF23261 - 2.5 8.7 12.3 20 5.9 8.0 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn-ribbon_8 PF09723.10 ORF23261 - 2.6 8.2 7.8 0.67 10.1 3.9 2.0 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF23261 - 7.2 6.7 10.1 1.8 8.7 4.9 2.4 1 1 1 2 2 2 0 C2H2-type zinc finger DUF639 PF04842.12 ORF23175 - 0.025 14.0 1.6 0.036 13.5 1.6 1.3 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) FtsK_gamma PF09397.10 ORF22753 - 0.018 14.8 0.0 15 5.5 0.0 3.1 3 0 0 3 3 3 0 Ftsk gamma domain Albumin_I PF08027.11 ORF22753 - 0.042 13.5 1.0 18 5.0 0.0 3.1 3 0 0 3 3 3 0 Albumin I chain b Asp_Arg_Hydrox PF05118.15 ORF21326 - 5.6e-18 65.2 0.0 7.1e-18 64.9 0.0 1.1 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase Shisa PF13908.6 ORF18902 - 0.012 15.9 1.3 0.015 15.6 1.3 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Orthoreo_P10 PF07204.11 ORF18902 - 0.11 12.4 1.2 0.14 12.1 0.5 1.5 1 1 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DUF3112 PF11309.8 ORF18902 - 1 8.7 4.9 0.2 11.1 1.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3112) EphA2_TM PF14575.6 ORF18902 - 2.3 9.1 3.9 2.8 8.9 2.6 2.0 2 1 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF3164 PF11363.8 ORF16819 - 0.17 11.4 0.0 0.24 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3164) FtsK_gamma PF09397.10 ORF15826 - 0.018 14.8 0.0 15 5.5 0.0 3.1 3 0 0 3 3 3 0 Ftsk gamma domain Albumin_I PF08027.11 ORF15826 - 0.042 13.5 1.0 18 5.0 0.0 3.1 3 0 0 3 3 3 0 Albumin I chain b Homeobox_KN PF05920.11 ORF15585 - 1.1e-17 63.6 0.4 2.5e-17 62.5 0.4 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF15585 - 2.2e-10 40.2 1.1 4.7e-10 39.2 1.1 1.6 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF15585 - 0.0036 17.1 0.1 0.0094 15.8 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT TPR_2 PF07719.17 ORF151804 - 0.00075 19.4 3.0 0.0045 17.0 0.0 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat DUF883 PF05957.13 ORF151804 - 0.0023 18.5 3.2 0.0034 17.9 3.2 1.5 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF883) Synaptobrevin PF00957.21 ORF151804 - 0.013 15.3 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 Synaptobrevin T2SSF PF00482.23 ORF151804 - 0.019 14.9 0.5 0.033 14.2 0.5 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F TPR_19 PF14559.6 ORF151804 - 0.24 11.9 2.6 5.5 7.6 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF2499 PF10693.9 ORF15014 - 0.079 13.2 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2499) NPM1-C PF16276.5 ORF148623 - 0.0097 15.9 0.1 0.039 13.9 0.0 2.0 2 0 0 2 2 2 1 Nucleophosmin C-terminal domain DUF4090 PF13319.6 ORF148209 - 0.039 14.2 0.2 0.079 13.2 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4090) Kelch_6 PF13964.6 ORF146848 - 2.4e-05 24.4 0.1 0.0042 17.3 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF146848 - 4.5e-05 22.9 0.9 0.021 14.4 0.1 2.7 2 1 0 2 2 2 2 Kelch motif Katanin_con80 PF13925.6 ORF140291 - 3e-15 56.6 0.0 3.6e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 con80 domain of Katanin HlyD_2 PF12700.7 ORF13966 - 0.031 13.0 4.6 0.036 12.8 4.6 1.0 1 0 0 1 1 1 0 HlyD family secretion protein TRM PF02005.16 ORF139639 - 0.0027 16.9 0.0 0.004 16.4 0.0 1.3 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase SAM_Exu PF18609.1 ORF139639 - 0.07 13.2 0.5 1.4 9.1 0.1 2.2 2 0 0 2 2 2 0 Exuperantia SAM-like domain HlyE PF06109.13 ORF139633 - 0.026 13.8 0.8 0.044 13.1 0.2 1.5 1 1 0 1 1 1 0 Haemolysin E (HlyE) PUMA PF15826.5 ORF139494 - 0.13 12.4 4.7 0.16 12.1 4.5 1.3 1 1 0 1 1 1 0 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis SHIPPO-rpt PF07004.12 ORF13946 - 2.3e-05 25.1 11.9 0.093 13.7 0.1 4.2 4 0 0 4 4 4 3 Sperm-tail PG-rich repeat DUF2729 PF10870.8 ORF138704 - 0.071 13.0 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2729) Fucose_iso_C PF02952.17 ORF138457 - 0.026 14.2 0.1 0.031 14.0 0.1 1.2 1 0 0 1 1 1 0 L-fucose isomerase, C-terminal domain Alpha_adaptinC2 PF02883.20 ORF137263 - 0.1 12.9 0.1 5 7.5 0.0 2.1 1 1 1 2 2 2 0 Adaptin C-terminal domain ARL2_Bind_BART PF11527.8 ORF136223 - 1.9e-18 66.7 10.8 2.1e-18 66.5 10.8 1.2 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART EF-G-binding_N PF07299.11 ORF136223 - 0.04 14.4 2.1 0.075 13.6 1.9 1.5 1 1 0 1 1 1 0 Elongation factor G-binding protein, N-terminal FliE PF02049.18 ORF136223 - 0.047 13.8 0.9 13 6.0 0.3 2.9 1 1 1 3 3 3 0 Flagellar hook-basal body complex protein FliE DUF4279 PF14106.6 ORF136223 - 0.068 13.4 0.1 0.086 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4279) Cauli_AT PF03233.13 ORF136223 - 0.071 13.0 2.8 0.091 12.7 2.8 1.2 1 0 0 1 1 1 0 Aphid transmission protein PBECR1 PF18809.1 ORF136223 - 0.37 11.5 4.3 2.7 8.7 4.3 2.0 1 1 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1 PRESAN PF09687.10 ORF136223 - 0.77 10.3 7.3 2.4 8.7 5.9 2.2 1 1 1 2 2 2 0 Plasmodium RESA N-terminal YtxH PF12732.7 ORF136223 - 4.7 7.8 6.2 83 3.8 6.2 2.5 1 1 0 1 1 1 0 YtxH-like protein zf-RING_10 PF16685.5 ORF135872 - 1.5 9.0 9.8 0.11 12.7 3.8 2.0 2 0 0 2 2 2 0 zinc RING finger of MSL2 zf-RING_2 PF13639.6 ORF135548 - 6.4e-12 45.6 12.2 9e-12 45.1 12.2 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF135548 - 1.4e-06 27.9 9.9 2.6e-06 27.0 9.9 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF135548 - 2.4e-06 27.7 13.7 7.4e-06 26.2 13.7 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF135548 - 0.00013 21.8 11.6 0.0002 21.1 11.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF135548 - 0.00019 21.2 10.6 0.00026 20.8 10.6 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF135548 - 0.016 15.3 9.8 0.029 14.4 9.8 1.5 1 0 0 1 1 1 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF135548 - 0.021 14.9 7.7 0.054 13.5 7.7 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF135548 - 0.039 13.9 13.3 0.058 13.4 13.3 1.3 1 0 0 1 1 1 0 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF135548 - 0.053 13.1 8.1 0.078 12.6 8.1 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF135548 - 0.12 12.5 11.6 0.36 11.0 11.6 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF135548 - 0.33 10.8 10.2 0.75 9.7 10.3 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF135548 - 0.76 9.9 13.8 1.3 9.2 13.8 1.4 1 0 0 1 1 1 0 RING-variant domain zf-RING_4 PF14570.6 ORF135548 - 2.2 8.1 9.4 4 7.3 9.4 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF4910 PF16254.5 ORF13527 - 0.0085 15.0 0.1 0.01 14.7 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4910) Flavodoxin_3 PF12641.7 ORF134268 - 0.042 13.5 1.4 0.046 13.4 0.6 1.5 1 1 0 1 1 1 0 Flavodoxin domain DUF3761 PF12587.8 ORF134268 - 0.24 11.9 0.3 0.24 11.9 0.3 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3761) T4bSS_IcmS PF12608.8 ORF134268 - 0.42 11.0 2.5 0.5 10.7 1.0 1.7 1 1 0 2 2 2 0 Type IVb secretion, IcmS, effector-recruitment Ribosomal_L39 PF00832.20 ORF133674 - 0.059 13.0 3.0 0.059 13.0 3.0 1.6 2 0 0 2 2 2 0 Ribosomal L39 protein SHIPPO-rpt PF07004.12 ORF132391 - 0.00022 22.0 1.9 0.0034 18.2 0.0 2.9 3 0 0 3 3 3 1 Sperm-tail PG-rich repeat Ribosomal_L39 PF00832.20 ORF130752 - 0.059 13.0 3.0 0.059 13.0 3.0 1.6 2 0 0 2 2 2 0 Ribosomal L39 protein MafB19-deam PF14437.6 ORF128798 - 0.00016 21.4 0.2 0.00027 20.7 0.2 1.2 1 1 0 1 1 1 1 MafB19-like deaminase dCMP_cyt_deam_1 PF00383.23 ORF128798 - 0.025 14.5 0.4 0.04 13.8 0.4 1.4 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region Me-amine-dh_L PF02975.14 ORF128513 - 0.11 12.9 0.5 0.11 12.9 0.5 1.8 2 1 0 2 2 2 0 Methylamine dehydrogenase, L chain YscO PF07321.12 ORF127407 - 0.096 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Type III secretion protein YscO AAA_9 PF12781.7 ORF126752 - 0.0078 15.4 0.2 0.0086 15.2 0.2 1.2 1 0 0 1 1 1 1 ATP-binding dynein motor region Ribosomal_L39 PF00832.20 ORF126427 - 0.059 13.0 3.0 0.059 13.0 3.0 1.6 2 0 0 2 2 2 0 Ribosomal L39 protein AAA_9 PF12781.7 ORF125974 - 0.0078 15.4 0.2 0.0086 15.2 0.2 1.2 1 0 0 1 1 1 1 ATP-binding dynein motor region TEA PF01285.18 ORF123901 - 0.032 14.3 0.0 0.054 13.6 0.0 1.3 1 0 0 1 1 1 0 TEA/ATTS domain VID27_PH PF17747.1 ORF122363 - 0.0035 17.6 0.0 0.006 16.8 0.0 1.4 1 0 0 1 1 1 1 VID27 PH-like domain UL17 PF17640.2 ORF121745 - 0.97 9.5 6.9 0.24 11.4 2.7 1.9 1 1 1 2 2 2 0 Uncharacterized UL17 ATP-synt_C PF00137.21 ORF121581 - 1e-31 109.0 27.2 3.8e-21 75.2 13.2 2.0 2 0 0 2 2 2 2 ATP synthase subunit C GerA PF03323.13 ORF121581 - 2.8 6.3 5.8 9.9 4.5 0.1 2.1 2 0 0 2 2 2 0 Bacillus/Clostridium GerA spore germination protein JSRP PF15312.6 ORF121498 - 0.53 10.2 3.6 15 5.6 0.2 2.3 2 0 0 2 2 2 0 Junctional sarcoplasmic reticulum protein CRISPR_Cse2 PF09485.10 ORF119676 - 0.094 13.2 0.1 0.11 13.0 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein Cse2 (CRISPR_cse2) DUF1102 PF06510.11 ORF119046 - 0.011 15.9 1.0 0.14 12.4 0.1 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF1102) FapA PF03961.13 ORF119046 - 0.019 13.6 7.3 0.021 13.4 7.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF1664 PF07889.12 ORF119046 - 0.14 12.2 8.4 0.16 12.0 5.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF2481 PF10654.9 ORF119046 - 0.74 9.8 7.2 6.4 6.8 1.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2481) VID27_PH PF17747.1 ORF117588 - 0.0035 17.6 0.0 0.006 16.8 0.0 1.4 1 0 0 1 1 1 1 VID27 PH-like domain Phage_Gp19 PF09355.10 ORF113878 - 0.047 14.1 0.0 0.072 13.5 0.0 1.3 1 0 0 1 1 1 0 Phage protein Gp19/Gp15/Gp42 MOR2-PAG1_N PF14222.6 ORF113191 - 0.051 12.5 0.0 0.053 12.5 0.0 1.1 1 0 0 1 1 1 0 Cell morphogenesis N-terminal 60KD_IMP PF02096.20 ORF113191 - 0.61 10.0 3.8 0.24 11.3 1.2 1.7 2 0 0 2 2 2 0 60Kd inner membrane protein Sugar_tr PF00083.24 ORF113191 - 0.71 8.7 7.9 0.82 8.5 7.9 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter MOR2-PAG1_N PF14222.6 ORF112414 - 0.051 12.5 0.0 0.053 12.5 0.0 1.1 1 0 0 1 1 1 0 Cell morphogenesis N-terminal 60KD_IMP PF02096.20 ORF112414 - 0.61 10.0 3.8 0.24 11.3 1.2 1.7 2 0 0 2 2 2 0 60Kd inner membrane protein Sugar_tr PF00083.24 ORF112414 - 0.71 8.7 7.9 0.82 8.5 7.9 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter Lebercilin PF15619.6 ORF111209 - 1.3e-06 28.2 18.0 1.3e-06 28.2 18.0 1.5 1 1 1 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease DHR10 PF18595.1 ORF111209 - 0.0067 16.5 19.8 0.0067 16.5 19.8 1.4 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain Spc7 PF08317.11 ORF111209 - 0.0091 14.9 21.0 0.0096 14.8 21.0 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein MCPsignal PF00015.21 ORF111209 - 0.011 15.5 6.7 0.018 14.9 6.7 1.4 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain LXG PF04740.12 ORF111209 - 0.022 14.4 11.7 0.029 14.1 10.7 1.8 1 1 0 1 1 1 0 LXG domain of WXG superfamily PI3K_P85_iSH2 PF16454.5 ORF111209 - 0.05 13.2 16.7 0.058 13.0 15.5 1.7 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Atg14 PF10186.9 ORF111209 - 0.069 12.2 16.8 0.076 12.1 16.8 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 NPV_P10 PF05531.12 ORF111209 - 0.081 13.4 8.9 0.045 14.2 4.0 2.5 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein HisKA_3 PF07730.13 ORF111209 - 0.1 13.1 0.8 0.1 13.1 0.8 2.2 1 1 2 3 3 3 0 Histidine kinase V_ATPase_I PF01496.19 ORF111209 - 0.11 10.4 14.8 0.13 10.1 14.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Med9 PF07544.13 ORF111209 - 0.16 12.1 13.1 0.086 12.9 10.3 2.0 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 ERM PF00769.19 ORF111209 - 0.2 11.5 21.4 0.014 15.3 15.3 1.9 1 1 1 2 2 2 0 Ezrin/radixin/moesin family Exonuc_VII_L PF02601.15 ORF111209 - 0.29 10.7 11.3 0.31 10.6 11.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fez1 PF06818.15 ORF111209 - 0.32 11.4 20.5 0.4 11.1 20.5 1.1 1 0 0 1 1 1 0 Fez1 Fib_alpha PF08702.10 ORF111209 - 0.43 10.8 19.2 0.21 11.7 12.8 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DASH_Spc34 PF08657.10 ORF111209 - 0.64 9.8 21.5 0.32 10.7 12.4 2.0 1 1 1 2 2 2 0 DASH complex subunit Spc34 Tup_N PF08581.10 ORF111209 - 0.65 10.3 14.5 0.63 10.4 6.7 2.7 1 1 1 2 2 2 0 Tup N-terminal Tam41_Mmp37 PF09139.11 ORF111209 - 0.69 9.3 10.0 0.78 9.1 10.0 1.1 1 0 0 1 1 1 0 Phosphatidate cytidylyltransferase, mitochondrial Tho2 PF11262.8 ORF111209 - 0.73 9.0 15.1 1 8.5 15.0 1.4 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 CorA PF01544.18 ORF111209 - 1.1 8.5 7.4 0.85 8.9 5.4 1.5 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein Prominin PF05478.11 ORF111209 - 1.1 7.1 10.0 1.3 6.9 10.0 1.1 1 0 0 1 1 1 0 Prominin Seryl_tRNA_N PF02403.22 ORF111209 - 1.2 9.4 21.3 0.036 14.3 10.8 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain TMPIT PF07851.13 ORF111209 - 1.4 8.1 14.9 1.6 7.9 14.4 1.3 1 1 0 1 1 1 0 TMPIT-like protein DUF3086 PF11285.8 ORF111209 - 1.5 7.8 11.0 1.7 7.7 11.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) APG6_N PF17675.1 ORF111209 - 1.7 9.2 21.1 2.8 8.5 20.9 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region IFT57 PF10498.9 ORF111209 - 1.9 7.3 20.4 3.2 6.6 20.4 1.4 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 APG17 PF04108.12 ORF111209 - 2 7.4 17.9 5.7 5.9 14.1 1.9 1 1 1 2 2 2 0 Autophagy protein Apg17 Tweety PF04906.13 ORF111209 - 2.7 6.6 6.8 2.6 6.6 6.2 1.3 1 1 0 1 1 1 0 Tweety LMBR1 PF04791.16 ORF111209 - 3.2 6.6 12.5 3.8 6.3 12.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF948 PF06103.11 ORF111209 - 3.2 8.1 6.9 5.3 7.4 5.7 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) eIF3_N PF09440.10 ORF111209 - 3.7 8.0 16.3 3.2 8.2 9.2 2.1 1 1 1 2 2 2 0 eIF3 subunit 6 N terminal domain DUF1664 PF07889.12 ORF111209 - 4.2 7.4 11.9 3.8 7.6 9.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) AAA_13 PF13166.6 ORF111209 - 4.2 5.9 19.0 2.7 6.5 17.2 1.4 1 1 0 1 1 1 0 AAA domain DUF16 PF01519.16 ORF111209 - 4.3 7.9 19.1 1.8e+02 2.6 19.0 2.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 Cauli_DNA-bind PF03310.13 ORF111209 - 6.2 6.9 13.9 4.4 7.4 9.3 2.0 2 0 0 2 2 2 0 Caulimovirus DNA-binding protein EF-hand_1 PF00036.32 ORF111055 - 5.4e-11 41.2 3.3 7.8e-06 25.1 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF111055 - 1.8e-09 37.9 1.1 1.8e-09 37.9 1.1 1.8 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF111055 - 1.9e-08 33.6 1.8 0.00032 20.4 0.0 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF111055 - 2.7e-08 33.5 3.2 3.7e-08 33.1 0.8 2.4 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF111055 - 3.8e-05 23.0 0.2 3.8e-05 23.0 0.2 3.4 4 0 0 4 4 4 1 EF hand EF-hand_9 PF14658.6 ORF111055 - 8.6e-05 22.8 0.5 0.00013 22.2 0.5 1.3 1 0 0 1 1 1 1 EF-hand domain DUF3349 PF11829.8 ORF111055 - 0.0012 19.5 4.1 0.0027 18.4 1.8 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3349) EF-hand_4 PF12763.7 ORF111055 - 0.0028 17.6 6.1 0.018 15.0 0.7 2.1 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF111055 - 0.0029 17.9 1.0 0.0055 17.0 1.0 1.6 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Cnd1_N PF12922.7 ORF111055 - 0.014 15.2 0.1 0.027 14.3 0.1 1.5 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term DUF4795 PF16043.5 ORF111055 - 0.053 13.1 4.9 0.069 12.8 4.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) Phage_TAC_12 PF12363.8 ORF111055 - 0.089 13.2 4.9 0.082 13.3 1.0 2.2 1 1 1 2 2 2 0 Phage tail assembly chaperone protein, TAC DUF3024 PF11225.8 ORF111055 - 0.27 11.5 1.1 8.7 6.7 0.2 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3024) EF-hand_8 PF13833.6 ORF110901 - 0.0051 16.6 0.7 0.0077 16.1 0.7 1.3 1 0 0 1 1 1 1 EF-hand domain pair EspA PF03433.13 ORF110901 - 0.02 14.7 2.4 0.022 14.6 2.4 1.1 1 0 0 1 1 1 0 EspA-like secreted protein EF-hand_7 PF13499.6 ORF110901 - 0.32 11.5 2.9 0.71 10.4 0.1 2.2 1 1 1 2 2 2 0 EF-hand domain pair SurA_N_2 PF13623.6 ORF110901 - 0.49 10.2 4.7 0.97 9.3 4.7 1.6 1 1 0 1 1 1 0 SurA N-terminal domain DtxR PF18357.1 ORF110698 - 0.31 10.7 1.7 0.91 9.3 0.4 2.0 2 0 0 2 2 2 0 Diphteria toxin repressor SH3 domain TPR_2 PF07719.17 ORF110215 - 0.00075 19.4 3.0 0.0045 17.0 0.0 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat DUF883 PF05957.13 ORF110215 - 0.0023 18.5 3.2 0.0034 17.9 3.2 1.5 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF883) Synaptobrevin PF00957.21 ORF110215 - 0.013 15.3 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 Synaptobrevin T2SSF PF00482.23 ORF110215 - 0.019 14.9 0.5 0.033 14.2 0.5 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F TPR_19 PF14559.6 ORF110215 - 0.24 11.9 2.6 5.5 7.6 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Vault_2 PF17794.1 ORF108611 - 0.031 14.7 0.0 0.054 13.9 0.0 1.4 1 0 0 1 1 1 0 Major Vault Protein repeat domain Ribosomal_L7Ae PF01248.26 ORF107260 - 2.4e-26 91.3 0.1 2.9e-26 91.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 ORF107260 - 0.00071 19.4 0.0 0.0011 18.8 0.0 1.4 1 1 0 1 1 1 1 PELOTA RNA binding domain RNase_P_pop3 PF08228.11 ORF107260 - 0.0033 17.5 0.0 0.0035 17.4 0.0 1.2 1 0 0 1 1 1 1 RNase P subunit Pop3 DUF1120 PF06551.12 ORF107150 - 0.0075 16.4 0.8 0.21 11.8 0.1 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1120) PH_TFIIH PF08567.11 ORF107150 - 0.06 13.7 1.4 5.1 7.5 0.0 2.8 1 1 2 3 3 3 0 TFIIH p62 subunit, N-terminal domain Atg8 PF02991.16 ORF104726 - 0.14 12.4 0.9 0.24 11.6 0.7 1.4 1 1 0 1 1 1 0 Autophagy protein Atg8 ubiquitin like Pro_isomerase PF00160.21 ORF104344 - 5.6e-23 82.0 0.0 6.5e-23 81.7 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Thg1 PF04446.12 ORF103646 - 0.21 11.6 0.0 0.31 11.1 0.0 1.2 1 0 0 1 1 1 0 tRNAHis guanylyltransferase Pox_C4_C10 PF03336.13 ORF101616 - 0.087 11.9 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Poxvirus C4/C10 protein DUF1651 PF07864.11 ORF100536 - 0.037 14.4 0.4 0.06 13.7 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1651) Meckelin PF09773.9 ORF100536 - 0.095 10.8 1.1 0.13 10.4 1.1 1.1 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) RALF PF05498.11 NODE_48179_length_394_cov_1.161560_g40308_i0forward_frame_1 - 0.0029 18.5 0.1 0.0053 17.7 0.1 1.4 1 0 0 1 1 1 1 Rapid ALkalinization Factor (RALF) DUF2976 PF11190.8 NODE_48177_length_394_cov_1.526462_g40306_i0reverse_frame_1 - 8.2 6.3 8.1 1.4 8.7 1.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2976) Bacillus_HBL PF05791.11 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 9.8e-06 25.5 3.8 9.8e-06 25.5 3.8 1.6 2 0 0 2 2 2 1 Bacillus haemolytic enterotoxin (HBL) Filament PF00038.21 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.00012 21.7 4.1 0.00016 21.4 4.1 1.1 1 0 0 1 1 1 1 Intermediate filament protein SlyX PF04102.12 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.00046 20.7 1.8 0.0024 18.4 0.2 2.6 2 1 1 3 3 3 1 SlyX DUF2120 PF09893.9 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.0013 18.8 2.6 0.0019 18.3 2.6 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2120) MAD PF05557.13 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.0017 16.8 4.0 0.0018 16.7 4.0 1.0 1 0 0 1 1 1 1 Mitotic checkpoint protein TPR_MLP1_2 PF07926.12 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.0019 18.2 1.5 0.0072 16.4 1.5 1.9 1 1 0 1 1 1 1 TPR/MLP1/MLP2-like protein Tup_N PF08581.10 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.0027 18.0 4.9 0.1 12.9 0.6 2.3 1 1 1 2 2 2 2 Tup N-terminal TMPIT PF07851.13 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.0046 16.3 1.6 0.0057 16.0 1.6 1.1 1 0 0 1 1 1 1 TMPIT-like protein HAUS-augmin3 PF14932.6 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.0048 16.5 0.7 0.0053 16.4 0.7 1.2 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 DUF1090 PF06476.12 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.0055 16.8 5.0 0.0087 16.2 1.4 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF1090) DUF1664 PF07889.12 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.0064 16.5 3.1 0.0079 16.2 2.4 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) LPP PF04728.13 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.0088 16.4 4.8 1.2 9.6 0.1 3.3 2 1 0 3 3 3 1 Lipoprotein leucine-zipper KH_5 PF13184.6 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.009 16.1 1.9 0.023 14.8 0.7 2.1 2 0 0 2 2 2 1 NusA-like KH domain Tropomyosin_1 PF12718.7 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.01 16.0 4.4 0.022 14.9 1.8 1.9 1 1 1 2 2 2 1 Tropomyosin like Prefoldin PF02996.17 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.01 15.8 1.1 0.019 14.8 0.2 2.0 2 1 0 2 2 2 1 Prefoldin subunit DUF3450 PF11932.8 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.013 14.8 2.3 0.016 14.5 1.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) CortBP2 PF09727.9 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.013 15.4 1.4 0.017 15.1 1.4 1.2 1 0 0 1 1 1 0 Cortactin-binding protein-2 FliJ PF02050.16 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.015 15.5 0.8 0.028 14.7 0.8 1.4 1 0 0 1 1 1 0 Flagellar FliJ protein Spc7 PF08317.11 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.016 14.1 3.7 0.019 13.8 3.7 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein NPV_P10 PF05531.12 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.016 15.6 5.9 0.19 12.2 1.7 2.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF1759 PF03564.15 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.017 15.1 2.1 0.021 14.7 1.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1759) RPW8 PF05659.11 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.031 14.0 1.6 0.058 13.1 1.3 1.6 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF16 PF01519.16 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.032 14.7 8.4 1.6 9.3 8.4 2.3 1 1 0 1 1 1 0 Protein of unknown function DUF16 USP8_interact PF08941.10 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.038 13.8 0.3 0.038 13.8 0.3 1.5 2 0 0 2 2 2 0 USP8 interacting DUF3531 PF12049.8 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.058 13.3 1.0 0.13 12.2 0.2 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF3531) HMMR_N PF15905.5 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.063 12.7 5.6 0.099 12.1 5.6 1.4 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF948 PF06103.11 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.065 13.5 2.4 0.2 11.9 1.9 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Prefoldin_2 PF01920.20 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.071 13.1 4.6 0.26 11.3 0.3 2.8 2 1 1 3 3 3 0 Prefoldin subunit DUF641 PF04859.12 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.071 13.4 3.0 0.32 11.3 0.5 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) BRE1 PF08647.11 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.073 13.2 5.2 0.11 12.6 3.0 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase CC2-LZ PF16516.5 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.1 13.0 5.4 0.48 10.8 0.6 2.9 1 1 2 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Lectin_N PF03954.14 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.11 12.3 1.8 0.25 11.1 1.6 1.8 1 1 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF4200 PF13863.6 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.18 12.2 3.6 0.19 12.1 2.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) DUF4806 PF16064.5 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.22 11.8 5.3 0.058 13.7 1.3 2.1 2 1 1 3 3 2 0 Domain of unknown function (DUF4806) Fib_alpha PF08702.10 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 0.42 10.8 10.2 0.46 10.6 8.0 2.1 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family TMF_DNA_bd PF12329.8 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 1.1 9.3 7.5 0.61 10.1 1.4 2.7 1 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding NYD-SP28 PF14772.6 NODE_48176_length_394_cov_1.688022_g40305_i0reverse_frame_1 - 4.2 7.5 7.4 9.7 6.3 0.5 2.5 1 1 1 2 2 2 0 Sperm tail DUF2909 PF11137.8 NODE_48174_length_394_cov_1.746518_g40303_i0forward_frame_1 - 0.12 12.3 0.1 0.19 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2909) Ribosomal_60s PF00428.19 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.019 15.5 13.6 0.028 15.0 13.6 1.3 1 0 0 1 1 1 0 60s Acidic ribosomal protein Bud13 PF09736.9 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.044 14.2 2.5 0.05 14.0 2.5 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor of RES complex DNA_pol3_tau_5 PF12170.8 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.075 13.1 1.5 0.12 12.5 1.5 1.2 1 0 0 1 1 1 0 DNA polymerase III tau subunit V interacting with alpha Gag_p10 PF02337.17 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.15 12.0 0.0 0.29 11.1 0.0 1.5 1 0 0 1 1 1 0 Retroviral GAG p10 protein SR-25 PF10500.9 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.17 11.5 7.3 0.2 11.2 7.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein TraV PF09676.10 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 0.42 11.6 4.1 0.51 11.3 4.1 1.2 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) TMEM214 PF10151.9 NODE_48172_length_394_cov_2.061281_g40301_i0reverse_frame_1 - 8.1 4.8 8.3 10 4.5 8.3 1.1 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator Perm-CXXC PF15629.6 NODE_48171_length_394_cov_2.295265_g40300_i0reverse_frame_1 - 0.077 13.3 1.3 0.18 12.1 1.3 1.6 1 0 0 1 1 1 0 Permuted single zf-CXXC unit Metallophos PF00149.28 NODE_48163_length_394_cov_3.050139_g40292_i0forward_frame_1 - 1.8e-16 61.3 0.1 2.2e-16 61.0 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 NODE_48163_length_394_cov_3.050139_g40292_i0forward_frame_1 - 0.21 12.1 1.6 0.28 11.6 0.2 2.0 2 1 0 2 2 2 0 Serine-threonine protein phosphatase N-terminal domain adh_short_C2 PF13561.6 NODE_48154_length_394_cov_53.378830_g40283_i0reverse_frame_1 - 4.4e-08 33.0 0.0 5.7e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 NODE_48154_length_394_cov_53.378830_g40283_i0reverse_frame_1 - 1.2e-07 31.4 0.2 1.8e-07 30.8 0.2 1.2 1 0 0 1 1 1 1 short chain dehydrogenase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks196.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks196.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks196.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks196.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3515 PF12028.8 NODE_48148_length_394_cov_70.944290_g40277_i0forward_frame_1 - 0.047 13.4 0.7 0.068 12.9 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3515) TPR_2 PF07719.17 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 1.4e-10 40.4 0.5 2.1e-05 24.3 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 2.2e-09 36.7 0.1 0.00091 19.0 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 4.1e-07 30.6 3.1 4.1e-07 30.6 3.1 1.6 2 0 0 2 2 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 7.2e-07 29.5 5.0 1e-05 26.0 0.6 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 3.5e-05 24.2 1.8 5.6e-05 23.6 1.8 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 6e-05 23.0 0.2 0.00038 20.5 0.0 2.0 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.00014 22.1 3.2 0.00044 20.5 3.2 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.00016 22.1 3.9 0.00026 21.4 0.1 2.4 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.00045 20.2 0.1 0.046 13.9 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.00062 19.6 0.4 0.58 10.3 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.00063 20.1 4.8 0.079 13.6 2.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat BTAD PF03704.17 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.0036 17.7 1.2 0.0076 16.7 0.5 1.7 1 1 1 2 2 2 1 Bacterial transcriptional activator domain ANAPC3 PF12895.7 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.0078 16.4 0.9 0.016 15.4 0.5 1.7 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.012 15.9 0.3 20 5.9 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_15 PF13429.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.017 14.3 1.5 0.45 9.7 0.2 2.1 1 1 0 2 2 2 0 Tetratricopeptide repeat DUF3856 PF12968.7 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.052 13.6 0.3 0.3 11.1 0.3 2.0 1 1 0 1 1 1 0 Domain of Unknown Function (DUF3856) TPR_9 PF13371.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.12 12.5 2.2 0.18 12.0 2.2 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_48145_length_394_cov_78.855153_g40274_i0forward_frame_1 - 0.14 12.1 1.8 3.5 7.6 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat 7tm_3 PF00003.22 NODE_48142_length_394_cov_88.175487_g40271_i0forward_frame_1 - 0.071 12.8 0.7 0.077 12.7 0.7 1.1 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR Ldl_recept_a PF00057.18 NODE_48139_length_394_cov_103.810585_g40268_i0reverse_frame_1 - 0.019 15.2 0.5 0.039 14.2 0.5 1.6 1 0 0 1 1 1 0 Low-density lipoprotein receptor domain class A DUF5453 PF17534.2 NODE_48138_length_394_cov_115.752089_g40267_i0reverse_frame_1 - 1.8 8.5 6.5 2 8.3 6.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5453) DUF2574 PF10836.8 NODE_48115_length_395_cov_2.077778_g40244_i0reverse_frame_1 - 0.15 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) PIN_6 PF17146.4 NODE_48110_length_395_cov_2.538889_g31065_i2forward_frame_1 - 0.033 14.7 0.7 0.08 13.4 0.7 1.6 1 1 0 1 1 1 0 PIN domain of ribonuclease HOK_GEF PF01848.16 NODE_48108_length_395_cov_3.008333_g40238_i0reverse_frame_1 - 1.2e-16 59.8 0.7 2e-16 59.1 0.7 1.4 1 0 0 1 1 1 1 Hok/gef family YmzC PF14157.6 NODE_48104_length_395_cov_11.452778_g40234_i0forward_frame_1 - 0.0077 16.3 0.6 0.012 15.7 0.6 1.2 1 0 0 1 1 1 1 YmzC-like protein DGF-1_5 PF11038.8 NODE_48103_length_395_cov_20.838889_g40233_i0reverse_frame_1 - 0.0035 16.7 2.1 0.0035 16.7 2.1 1.5 1 1 1 2 2 2 1 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 Bse634I PF07832.11 NODE_48103_length_395_cov_20.838889_g40233_i0reverse_frame_1 - 0.22 10.9 1.4 0.27 10.5 1.4 1.1 1 0 0 1 1 1 0 Cfr10I/Bse634I restriction endonuclease GCV_T_C PF08669.11 NODE_48094_length_395_cov_59.302778_g40224_i0reverse_frame_1 - 7.4e-08 32.2 0.1 1.1e-07 31.7 0.1 1.3 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain TraL PF07178.11 NODE_48087_length_395_cov_75.469444_g40217_i0reverse_frame_1 - 1.2 9.6 3.3 0.97 9.9 0.2 2.2 1 1 2 3 3 3 0 TraL protein DUF3270 PF11674.8 NODE_48086_length_395_cov_78.222222_g40216_i0reverse_frame_1 - 0.093 12.9 2.4 0.18 12.0 2.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) SCA7 PF08313.12 NODE_48086_length_395_cov_78.222222_g40216_i0forward_frame_1 - 0.19 11.6 0.6 0.38 10.7 0.6 1.4 1 0 0 1 1 1 0 SCA7, zinc-binding domain SVWC PF15430.6 NODE_48082_length_395_cov_84.480556_g40212_i0reverse_frame_1 - 0.49 10.7 6.4 1.9 8.8 0.8 2.4 2 1 1 3 3 3 0 Single domain von Willebrand factor type C Mitofilin PF09731.9 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 0.4 9.5 22.4 0.47 9.2 22.4 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Pex24p PF06398.11 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 0.42 9.5 7.7 0.51 9.3 7.7 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Glyco_transf_41 PF13844.6 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 0.9 7.9 6.5 0.96 7.8 6.5 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 41 RR_TM4-6 PF06459.12 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 1.7 8.4 20.3 2 8.2 20.3 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF4407 PF14362.6 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 2.4 7.5 13.3 2.7 7.3 13.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3807 PF12720.7 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 2.4 8.4 23.5 2.9 8.2 23.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Vfa1 PF08432.10 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 3.5 7.9 23.4 4.7 7.5 23.4 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 RabGAP-TBC PF00566.18 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 4.5 6.9 10.7 5.7 6.5 10.7 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain AAA_11 PF13086.6 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 4.9 6.9 17.4 5.7 6.6 17.4 1.1 1 0 0 1 1 1 0 AAA domain MAJIN PF15077.6 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 6 6.6 14.6 7.2 6.3 14.6 1.1 1 0 0 1 1 1 0 Membrane-anchored junction protein DUF3492 PF11997.8 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 7.3 6.2 7.0 7.8 6.1 7.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3492) Herpes_glycop PF01528.16 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 7.6 5.3 5.0 8.5 5.1 5.0 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein M Paramyxo_ncap PF00973.19 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 8.4 5.2 12.4 9.2 5.0 12.4 1.0 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein OmpH PF03938.14 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_1 - 9 6.6 27.4 12 6.2 27.4 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF3275 PF11679.8 NODE_48070_length_395_cov_151.580556_g2426_i3reverse_frame_1 - 0.2 11.6 2.3 0.26 11.2 2.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) PD-C2-AF1 PF09310.10 NODE_48067_length_395_cov_218.500000_g40198_i0reverse_frame_1 - 0.13 11.6 0.1 0.18 11.2 0.1 1.2 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 NUMOD4 PF07463.11 NODE_48067_length_395_cov_218.500000_g40198_i0reverse_frame_1 - 0.27 11.5 6.1 1.5 9.1 0.6 2.4 2 1 0 2 2 2 0 NUMOD4 motif CorA PF01544.18 NODE_48063_length_395_cov_257.952778_g40194_i0reverse_frame_1 - 0.14 11.4 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein CLZ PF16526.5 NODE_48052_length_396_cov_1.811634_g40187_i0forward_frame_1 - 1 9.8 5.8 1.5 9.3 0.5 2.5 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels GCK PF07802.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_1 - 0.0028 18.0 0.6 0.0067 16.8 0.1 1.7 2 0 0 2 2 2 1 GCK domain HMMR_C PF15908.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_1 - 0.16 12.2 6.6 0.13 12.5 5.4 1.4 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal GlgS PF08971.11 NODE_48039_length_396_cov_2.310249_g40174_i0forward_frame_1 - 0.026 14.6 1.0 0.05 13.6 1.0 1.5 1 0 0 1 1 1 0 Glycogen synthesis protein SNF PF00209.18 NODE_48031_length_396_cov_3.429363_g40166_i0forward_frame_1 - 9.5e-13 47.7 4.9 1.1e-12 47.4 4.9 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family PHD_Oberon PF07227.11 NODE_48025_length_396_cov_33.481994_g40160_i0forward_frame_1 - 0.3 11.0 4.0 0.11 12.4 1.9 1.4 2 0 0 2 2 2 0 PHD - plant homeodomain finger protein DUSP PF06337.12 NODE_48012_length_396_cov_97.240997_g40148_i0forward_frame_1 - 8e-06 26.4 0.1 8.7e-06 26.3 0.1 1.2 1 0 0 1 1 1 1 DUSP domain DUF4604 PF15377.6 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 0.057 13.8 21.1 0.068 13.6 21.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) PAP_RNA-bind PF04926.15 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 0.073 12.7 2.0 0.091 12.4 2.0 1.2 1 0 0 1 1 1 0 Poly(A) polymerase predicted RNA binding domain RPN2_C PF18004.1 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 0.11 12.4 16.7 0.13 12.1 16.7 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain SPT6_acidic PF14632.6 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 0.55 10.9 17.5 0.19 12.3 6.1 2.1 2 0 0 2 2 2 0 Acidic N-terminal SPT6 MCM_bind PF09739.9 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 1.7 7.0 3.9 1.8 6.9 3.9 1.0 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor SRP72 PF08492.12 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 3.9 8.0 14.4 3.8 8.0 4.9 2.3 2 0 0 2 2 2 0 SRP72 RNA-binding domain MRI PF15325.6 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_1 - 9 7.4 12.5 9.2 7.4 11.1 1.7 1 1 1 2 2 2 0 Modulator of retrovirus infection DUF3810 PF12725.7 NODE_48006_length_396_cov_150.027701_g40142_i0forward_frame_1 - 0.62 9.4 3.4 0.67 9.2 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) TRP PF06011.12 NODE_48006_length_396_cov_150.027701_g40142_i0forward_frame_1 - 5.5 5.6 10.2 6.5 5.4 10.2 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Fip1 PF05182.13 NODE_47999_length_396_cov_187.592798_g40135_i0forward_frame_1 - 1.5e-11 43.6 0.1 2.5e-11 42.9 0.1 1.3 1 0 0 1 1 1 1 Fip1 motif BTD PF09270.10 NODE_47998_length_396_cov_189.476454_g40134_i0reverse_frame_1 - 0.0034 17.6 0.9 0.67 10.2 0.3 2.1 1 1 1 2 2 2 2 Beta-trefoil DNA-binding domain Thioredoxin PF00085.20 NODE_47991_length_396_cov_397.296399_g40127_i0reverse_frame_1 - 3.7e-05 23.7 0.0 5.1e-05 23.2 0.0 1.3 1 1 0 1 1 1 1 Thioredoxin TMEM213 PF15192.6 NODE_47973_length_397_cov_2.129834_g40110_i0reverse_frame_2 - 0.089 12.8 2.4 0.61 10.1 0.0 2.8 2 1 1 3 3 3 0 TMEM213 family zf-nanos PF05741.13 NODE_47973_length_397_cov_2.129834_g40110_i0forward_frame_2 - 0.082 13.2 0.2 0.14 12.4 0.1 1.6 1 1 0 1 1 1 0 Nanos RNA binding domain DUF5599 PF18141.1 NODE_47971_length_397_cov_2.361878_g40108_i0reverse_frame_2 - 9.8e-11 41.8 0.3 3.4e-09 36.8 0.3 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF5599) YIF1 PF03878.15 NODE_47968_length_397_cov_2.593923_g40105_i0forward_frame_2 - 0.26 10.8 8.1 0.3 10.6 8.1 1.1 1 0 0 1 1 1 0 YIF1 CytadhesinP1 PF12378.8 NODE_47967_length_397_cov_2.748619_g40104_i0forward_frame_3 - 1 9.6 8.7 0.17 12.1 4.1 2.2 1 1 1 2 2 2 0 Trypsin-sensitive surface-exposed protein RB_B PF01857.20 NODE_47963_length_397_cov_3.323204_g40100_i0reverse_frame_2 - 3.5 7.7 10.8 1 9.4 5.9 2.2 1 1 1 2 2 2 0 Retinoblastoma-associated protein B domain DuoxA PF10204.9 NODE_47963_length_397_cov_3.323204_g40100_i0forward_frame_3 - 0.12 11.3 0.9 0.2 10.6 0.9 1.3 1 0 0 1 1 1 0 Dual oxidase maturation factor Toxin_35 PF10530.9 NODE_47961_length_397_cov_3.566298_g40098_i0reverse_frame_3 - 0.45 10.5 13.7 0.99 9.4 13.7 1.5 1 0 0 1 1 1 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold RNA_pol_Rpb1_6 PF04992.14 NODE_47958_length_397_cov_3.754144_g40095_i0reverse_frame_3 - 0.048 13.5 0.1 0.11 12.3 0.0 1.6 2 0 0 2 2 2 0 RNA polymerase Rpb1, domain 6 DUF2059 PF09832.9 NODE_47958_length_397_cov_3.754144_g40095_i0reverse_frame_3 - 0.13 12.3 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2059) Ribonuc_red_lgC PF02867.15 NODE_47957_length_397_cov_4.328729_g40094_i0forward_frame_3 - 2.9e-29 102.0 0.0 3.1e-29 101.9 0.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain zf-CDGSH PF09360.10 NODE_47957_length_397_cov_4.328729_g40094_i0forward_frame_2 - 5.8 7.2 12.0 2.9e+03 -1.4 10.5 3.4 2 1 0 2 2 2 0 Iron-binding zinc finger CDGSH type Consortin_C PF15281.6 NODE_47949_length_397_cov_54.676796_g40086_i0forward_frame_3 - 0.066 13.2 0.2 0.11 12.5 0.2 1.4 1 0 0 1 1 1 0 Consortin C-terminus PTH2 PF01981.16 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 6.7e-26 90.9 0.1 1.2e-25 90.1 0.1 1.4 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 bZIP_1 PF00170.21 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.00014 21.9 4.0 0.00035 20.6 4.0 1.7 1 0 0 1 1 1 1 bZIP transcription factor ZapB PF06005.12 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.01 16.2 5.8 0.01 16.2 5.8 1.8 2 0 0 2 2 2 0 Cell division protein ZapB TMCO5 PF14992.6 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.013 15.1 1.1 0.016 14.8 1.1 1.1 1 0 0 1 1 1 0 TMCO5 family DUF948 PF06103.11 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.024 14.9 0.2 0.054 13.8 0.1 1.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) GIT_CC PF16559.5 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.039 13.8 1.4 0.039 13.8 1.4 1.6 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF3086 PF11285.8 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.046 12.8 0.9 0.064 12.4 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) YabA PF06156.13 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.048 14.3 0.5 0.048 14.3 0.5 1.6 2 0 0 2 2 2 0 Initiation control protein YabA Latarcin PF10279.9 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.13 12.7 3.8 0.32 11.4 2.0 2.1 1 1 1 2 2 2 0 Latarcin precursor Rotamase PF00639.21 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.16 13.0 2.2 0.26 12.3 0.8 1.9 2 0 0 2 2 2 0 PPIC-type PPIASE domain GrpE PF01025.19 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.17 11.5 4.3 0.058 13.0 1.6 1.5 2 0 0 2 2 2 0 GrpE DUF4337 PF14235.6 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 0.58 10.3 3.6 0.37 10.9 2.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) CENP-Q PF13094.6 NODE_47937_length_397_cov_87.516575_g40074_i0forward_frame_3 - 2.9 8.1 11.8 0.4 10.9 6.2 1.9 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Vanabin-2 PF11437.8 NODE_47936_length_397_cov_93.726519_g40073_i0reverse_frame_2 - 5.7 7.2 17.5 1.1 9.4 5.2 2.8 1 1 1 3 3 3 0 Vanadium-binding protein 2 TNFR_c6 PF00020.18 NODE_47936_length_397_cov_93.726519_g40073_i0forward_frame_2 - 0.46 10.9 6.6 4.7 7.7 3.2 2.6 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region ATP_Ca_trans_C PF12424.8 NODE_47935_length_397_cov_95.455801_g40072_i0reverse_frame_3 - 0.19 12.3 0.0 0.38 11.3 0.0 1.6 1 1 0 1 1 1 0 Plasma membrane calcium transporter ATPase C terminal Sprouty PF05210.13 NODE_47935_length_397_cov_95.455801_g40072_i0reverse_frame_3 - 0.2 12.0 10.6 0.99 9.8 10.6 1.9 1 1 0 1 1 1 0 Sprouty protein (Spry) 7TM_GPCR_Sri PF10327.9 NODE_47935_length_397_cov_95.455801_g40072_i0forward_frame_3 - 0.045 12.9 2.1 0.33 10.1 0.2 2.0 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Sri mTERF PF02536.14 NODE_47934_length_397_cov_100.140884_g40071_i0reverse_frame_2 - 6.6e-10 38.4 0.0 7.3e-10 38.3 0.0 1.1 1 0 0 1 1 1 1 mTERF RecG_N PF17190.4 NODE_47934_length_397_cov_100.140884_g40071_i0reverse_frame_2 - 0.04 14.6 0.0 0.051 14.3 0.0 1.2 1 0 0 1 1 1 0 RecG N-terminal helical domain ExoD PF06055.12 NODE_47934_length_397_cov_100.140884_g40071_i0reverse_frame_2 - 0.072 12.5 0.0 0.091 12.1 0.0 1.3 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD BDV_M PF16520.5 NODE_47930_length_397_cov_116.002762_g40067_i0reverse_frame_2 - 0.033 14.6 0.1 0.049 14.0 0.1 1.3 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae Med19 PF10278.9 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.0086 16.0 11.4 0.01 15.8 11.4 1.2 1 0 0 1 1 1 1 Mediator of RNA pol II transcription subunit 19 FliW PF02623.15 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.033 14.1 0.1 0.049 13.6 0.1 1.3 1 0 0 1 1 1 0 FliW protein GAGA_bind PF06217.12 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.55 10.5 7.3 0.63 10.3 7.3 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Vfa1 PF08432.10 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.56 10.5 12.2 0.7 10.2 12.2 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Cytomega_UL84 PF06284.11 NODE_47928_length_397_cov_126.558011_g40065_i0reverse_frame_2 - 0.98 7.8 3.0 0.96 7.8 3.0 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Herpes_UL31 PF02718.14 NODE_47927_length_397_cov_126.743094_g40064_i0forward_frame_3 - 0.85 8.6 2.8 1.1 8.2 2.8 1.1 1 0 0 1 1 1 0 Herpesvirus UL31-like protein DUF3328 PF11807.8 NODE_47922_length_397_cov_180.665746_g40059_i0reverse_frame_3 - 0.083 12.7 2.1 0.11 12.3 2.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3328) DUF3731 PF12531.8 NODE_47922_length_397_cov_180.665746_g40059_i0forward_frame_2 - 0.034 13.9 0.6 0.049 13.4 0.6 1.3 1 0 0 1 1 1 0 DNA-K related protein YebO PF13974.6 NODE_47922_length_397_cov_180.665746_g40059_i0forward_frame_2 - 0.4 10.8 2.3 3.4 7.8 0.3 2.2 2 0 0 2 2 2 0 YebO-like protein zf-XS PF03470.14 NODE_47922_length_397_cov_180.665746_g40059_i0forward_frame_2 - 1.4 9.2 9.2 0.13 12.5 2.2 2.3 2 0 0 2 2 2 0 XS zinc finger domain SRP72 PF08492.12 NODE_47922_length_397_cov_180.665746_g40059_i0forward_frame_2 - 2 8.9 18.6 2.8 8.4 2.3 3.0 3 0 0 3 3 3 0 SRP72 RNA-binding domain Comm PF15957.5 NODE_47921_length_397_cov_193.845304_g40058_i0reverse_frame_3 - 0.062 13.6 0.5 0.076 13.4 0.5 1.3 1 0 0 1 1 1 0 Commissureless CENP-R PF06729.12 NODE_47921_length_397_cov_193.845304_g40058_i0reverse_frame_3 - 0.07 13.1 6.0 0.089 12.7 6.0 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R DUF4710 PF15828.5 NODE_47921_length_397_cov_193.845304_g40058_i0forward_frame_2 - 3.7 7.7 15.8 0.44 10.7 7.4 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4710) DUF2207 PF09972.9 NODE_47919_length_397_cov_222.303867_g40056_i0forward_frame_2 - 2.3 6.9 5.8 3.2 6.4 5.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Shisa PF13908.6 NODE_47918_length_397_cov_257.864641_g40055_i0forward_frame_2 - 0.0091 16.3 0.1 0.011 16.0 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF5090 PF17009.5 NODE_47918_length_397_cov_257.864641_g40055_i0forward_frame_2 - 1.3 8.9 6.4 1.6 8.7 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) ApoB100_C PF12491.8 NODE_47909_length_397_cov_5640.524862_g37710_i2forward_frame_2 - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal DUF5090 PF17009.5 NODE_47903_length_398_cov_1.713499_g40043_i0reverse_frame_2 - 0.21 11.5 15.1 0.28 11.1 15.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) TMEM214 PF10151.9 NODE_47903_length_398_cov_1.713499_g40043_i0forward_frame_2 - 0.23 9.9 3.7 0.26 9.7 3.7 1.0 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator V_ATPase_I PF01496.19 NODE_47901_length_398_cov_1.820937_g40041_i0reverse_frame_3 - 2.7e-46 158.0 1.3 2.9e-46 157.9 1.3 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family EF-hand_7 PF13499.6 NODE_47893_length_398_cov_3.818182_g40033_i0reverse_frame_2 - 6.1e-08 33.0 0.8 1.1e-07 32.2 0.8 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_47893_length_398_cov_3.818182_g40033_i0reverse_frame_2 - 6e-05 22.7 0.1 0.23 11.5 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 NODE_47893_length_398_cov_3.818182_g40033_i0reverse_frame_2 - 8.6e-05 21.8 0.6 0.02 14.4 0.4 2.4 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_47893_length_398_cov_3.818182_g40033_i0reverse_frame_2 - 0.0015 18.3 2.7 0.0064 16.3 1.8 2.2 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_9 PF14658.6 NODE_47893_length_398_cov_3.818182_g40033_i0reverse_frame_2 - 0.047 14.0 0.1 0.082 13.2 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain Cep57_CLD_2 PF14197.6 NODE_47887_length_398_cov_5.316804_g40027_i0reverse_frame_2 - 0.02 15.0 2.2 0.02 15.0 2.2 2.3 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 DUF3073 PF11273.8 NODE_47887_length_398_cov_5.316804_g40027_i0reverse_frame_2 - 4.4 8.1 6.1 9.5 7.1 6.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3073) DUF5572 PF17733.1 NODE_47885_length_398_cov_44.223140_g40025_i0forward_frame_3 - 1.6e-12 47.1 0.5 2.5e-12 46.4 0.5 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5572) Pyrid_oxidase_2 PF13883.6 NODE_47880_length_398_cov_74.275482_g40020_i0reverse_frame_3 - 0.14 12.1 0.4 0.22 11.5 0.4 1.3 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase SHR-BD PF06650.12 NODE_47880_length_398_cov_74.275482_g40020_i0forward_frame_3 - 5.9e-05 22.6 0.8 0.0012 18.3 0.8 2.1 1 1 0 1 1 1 1 SHR-binding domain of vacuolar-sorting associated protein 13 FGFR3_TM PF18123.1 NODE_47874_length_398_cov_94.515152_g40014_i0forward_frame_2 - 6.4 6.4 8.0 1.5 8.4 0.2 3.1 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain Arf PF00025.21 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 5.7e-39 133.4 0.0 6.5e-39 133.2 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 2.2e-08 33.8 0.0 3.1e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.0022 17.6 0.0 0.0025 17.4 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.0051 16.2 0.0 0.0061 15.9 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Roc PF08477.13 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.0066 16.7 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.055 12.6 0.2 0.097 11.8 0.2 1.4 1 1 0 1 1 1 0 G-protein alpha subunit DctP PF03480.13 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.1 11.9 0.0 0.24 10.7 0.0 1.6 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein, family 7 NACHT PF05729.12 NODE_47872_length_398_cov_100.393939_g40012_i0forward_frame_3 - 0.11 12.4 0.1 0.17 11.8 0.0 1.4 2 0 0 2 2 2 0 NACHT domain PspC PF04024.12 NODE_47871_length_398_cov_104.796143_g40011_i0forward_frame_2 - 0.2 11.5 0.1 0.32 10.8 0.1 1.3 1 0 0 1 1 1 0 PspC domain DUF2070 PF09843.9 NODE_47868_length_398_cov_130.126722_g40008_i0reverse_frame_3 - 3.5 5.8 11.3 3.6 5.8 11.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TspO_MBR PF03073.15 NODE_47868_length_398_cov_130.126722_g40008_i0reverse_frame_3 - 9.7 6.2 12.7 13 5.8 12.7 1.1 1 0 0 1 1 1 0 TspO/MBR family hGDE_N PF14699.6 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_3 - 0.0035 17.5 0.5 0.0054 16.8 0.5 1.4 1 0 0 1 1 1 1 N-terminal domain from the human glycogen debranching enzyme WD40_3 PF15911.5 NODE_47868_length_398_cov_130.126722_g40008_i0forward_frame_2 - 0.019 15.0 0.0 0.032 14.2 0.0 1.4 1 0 0 1 1 1 0 WD domain, G-beta repeat m_DGTX_Dc1a_b_c PF17491.2 NODE_47861_length_398_cov_176.829201_g40001_i0reverse_frame_2 - 0.0073 16.9 0.3 0.0073 16.9 0.3 2.0 2 0 0 2 2 2 1 Spider Toxins mu-diguetoxin-1 a, b and c TspO_MBR PF03073.15 NODE_47858_length_398_cov_202.319559_g39998_i0reverse_frame_3 - 4.6 7.3 11.8 6.2 6.9 11.8 1.2 1 0 0 1 1 1 0 TspO/MBR family Longin PF13774.6 NODE_47858_length_398_cov_202.319559_g39998_i0reverse_frame_2 - 0.26 11.3 3.4 0.39 10.8 3.4 1.4 1 0 0 1 1 1 0 Regulated-SNARE-like domain hGDE_N PF14699.6 NODE_47858_length_398_cov_202.319559_g39998_i0forward_frame_3 - 0.0046 17.1 0.6 0.0079 16.3 0.6 1.5 1 0 0 1 1 1 1 N-terminal domain from the human glycogen debranching enzyme WD40_3 PF15911.5 NODE_47858_length_398_cov_202.319559_g39998_i0forward_frame_2 - 0.037 14.0 0.0 0.068 13.2 0.0 1.4 1 0 0 1 1 1 0 WD domain, G-beta repeat CS PF04969.16 NODE_47856_length_398_cov_284.672176_g39996_i0forward_frame_3 - 8e-06 26.8 0.0 1.1e-05 26.3 0.0 1.2 1 0 0 1 1 1 1 CS domain TPP1 PF10341.9 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_2 - 0.00071 19.5 3.4 0.001 19.0 3.4 1.2 1 0 0 1 1 1 1 Shelterin complex subunit, TPP1/ACD DUF3896 PF13035.6 NODE_47854_length_398_cov_340.440771_g39994_i0reverse_frame_2 - 0.052 13.7 0.9 9.3 6.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3896) Latrotoxin_C PF15658.6 NODE_47841_length_399_cov_2.112637_g39983_i0reverse_frame_2 - 0.005 16.6 0.4 0.0091 15.8 0.4 1.6 1 1 0 1 1 1 1 Latrotoxin C-terminal domain TM2 PF05154.16 NODE_47838_length_399_cov_2.423077_g39980_i0reverse_frame_3 - 0.014 15.7 1.3 0.032 14.6 1.3 1.6 1 0 0 1 1 1 0 TM2 domain DUF5004 PF16395.5 NODE_47838_length_399_cov_2.423077_g39980_i0forward_frame_3 - 0.034 14.1 0.0 0.045 13.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5004) EABR PF12180.8 NODE_47833_length_399_cov_2.747253_g39975_i0reverse_frame_2 - 0.21 11.2 0.2 0.35 10.5 0.2 1.3 1 0 0 1 1 1 0 TSG101 and ALIX binding domain of CEP55 DUF2304 PF10066.9 NODE_47828_length_399_cov_3.173077_g39970_i0forward_frame_2 - 0.11 12.7 0.1 0.19 12.0 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) Adenine_glyco PF03352.13 NODE_47823_length_399_cov_4.148352_g39965_i0reverse_frame_3 - 0.005 16.6 0.5 0.0058 16.4 0.5 1.1 1 0 0 1 1 1 1 Methyladenine glycosylase DNA_repr_REX1B PF14966.6 NODE_47823_length_399_cov_4.148352_g39965_i0reverse_frame_3 - 0.096 13.4 0.3 1.2 9.8 0.1 2.1 1 1 1 2 2 2 0 DNA repair REX1-B O_Spanin_T7 PF17531.2 NODE_47822_length_399_cov_4.439560_g5271_i5forward_frame_3 - 0.0063 16.5 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 outer-membrane spanin sub-unit TMEM189_B_dmain PF10520.9 NODE_47822_length_399_cov_4.439560_g5271_i5forward_frame_3 - 0.14 12.2 0.3 0.19 11.9 0.3 1.2 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain RPN2_C PF18004.1 NODE_47822_length_399_cov_4.439560_g5271_i5forward_frame_2 - 0.67 9.9 11.8 0.87 9.5 11.8 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain Wzy_C PF04932.15 NODE_47821_length_399_cov_4.675824_g39964_i0reverse_frame_3 - 0.23 11.1 6.1 0.31 10.7 6.1 1.2 1 0 0 1 1 1 0 O-Antigen ligase DinB_2 PF12867.7 NODE_47819_length_399_cov_5.271978_g39962_i0forward_frame_2 - 0.045 14.3 0.3 0.063 13.8 0.3 1.4 1 1 0 1 1 1 0 DinB superfamily DUF4164 PF13747.6 NODE_47818_length_399_cov_8.282967_g39961_i0reverse_frame_2 - 0.022 15.0 1.0 0.03 14.6 0.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) DUF4795 PF16043.5 NODE_47818_length_399_cov_8.282967_g39961_i0reverse_frame_2 - 1.2 8.6 9.8 4 7.0 3.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) SUKH-4 PF14435.6 NODE_47817_length_399_cov_33.252747_g39960_i0reverse_frame_2 - 0.1 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 SUKH-4 immunity protein DUF5398 PF17376.2 NODE_47815_length_399_cov_46.079670_g39958_i0reverse_frame_3 - 0.026 15.2 0.7 5.5 7.7 0.7 2.7 2 1 1 3 3 3 0 Family of unknown function (DUF5398) RraB PF06877.11 NODE_47810_length_399_cov_62.750000_g39953_i0reverse_frame_3 - 0.025 15.3 0.0 0.034 14.9 0.0 1.2 1 0 0 1 1 1 0 Regulator of ribonuclease activity B POM121 PF15229.6 NODE_47806_length_399_cov_83.692308_g39949_i0reverse_frame_3 - 0.0029 17.3 3.2 0.0081 15.8 3.2 1.7 1 1 0 1 1 1 1 POM121 family SAA PF00277.18 NODE_47798_length_399_cov_102.359890_g39941_i0reverse_frame_2 - 0.25 11.8 4.7 0.7 10.4 0.1 2.3 2 1 0 2 2 2 0 Serum amyloid A protein Pox_L5 PF04872.13 NODE_47798_length_399_cov_102.359890_g39941_i0forward_frame_2 - 0.0026 17.6 0.1 0.0041 17.0 0.1 1.3 1 0 0 1 1 1 1 Poxvirus L5 protein family FAM176 PF14851.6 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.00051 19.7 1.5 0.00069 19.3 1.5 1.1 1 0 0 1 1 1 1 FAM176 family DUF4834 PF16118.5 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.0036 18.2 1.4 0.0049 17.8 1.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) SID-1_RNA_chan PF13965.6 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.022 13.2 1.8 0.026 13.0 1.8 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 OAD_gamma PF04277.13 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.031 14.9 1.2 0.07 13.7 1.2 1.7 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Peptidase_S49_N PF08496.10 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.034 14.2 4.8 0.041 13.9 4.8 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal V_ATPase_I PF01496.19 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.063 11.2 2.2 0.074 11.0 2.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CLN3 PF02487.17 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.14 11.2 0.5 0.17 10.9 0.5 1.0 1 0 0 1 1 1 0 CLN3 protein Zip PF02535.22 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.27 10.4 0.2 0.3 10.3 0.2 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter O-antigen_lig PF13425.6 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.33 9.7 2.2 0.4 9.4 2.2 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Ninjurin PF04923.12 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.36 10.8 2.3 0.45 10.5 2.3 1.4 1 1 0 1 1 1 0 Ninjurin Med19 PF10278.9 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 0.98 9.3 12.6 1.3 8.9 12.6 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 EphA2_TM PF14575.6 NODE_47794_length_399_cov_110.532967_g39937_i0reverse_frame_3 - 1.6 9.7 7.5 3.7 8.5 7.4 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain YMF19 PF02326.15 NODE_47792_length_399_cov_111.936813_g39935_i0forward_frame_3 - 5.1 7.9 9.6 1 10.2 2.3 2.2 2 0 0 2 2 2 0 Plant ATP synthase F0 Transglut_core3 PF13471.6 NODE_47792_length_399_cov_111.936813_g39935_i0forward_frame_2 - 0.017 15.0 0.6 0.023 14.6 0.6 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily WD40 PF00400.32 NODE_47780_length_399_cov_363.997253_g39923_i0reverse_frame_3 - 0.0024 18.6 6.0 0.033 15.1 2.4 2.9 3 0 0 3 3 3 2 WD domain, G-beta repeat DUF4440 PF14534.6 NODE_47774_length_399_cov_7817.585165_g39918_i0reverse_frame_2 - 0.0032 17.9 0.0 0.0046 17.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) Peptidase_M42 PF05343.14 NODE_47774_length_399_cov_7817.585165_g39918_i0forward_frame_3 - 0.056 12.5 0.0 0.085 11.9 0.0 1.2 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase Homeodomain PF00046.29 ORF99728 - 5.5e-06 26.1 0.8 5.5e-06 26.1 0.8 1.8 2 0 0 2 2 2 1 Homeodomain HTH_Tnp_1_2 PF13022.6 ORF99728 - 0.014 15.6 0.4 0.024 14.8 0.3 1.4 1 1 0 1 1 1 0 Helix-turn-helix of insertion element transposase Phage_AlpA PF05930.12 ORF99728 - 0.036 13.9 0.2 0.1 12.5 0.0 1.8 2 0 0 2 2 2 0 Prophage CP4-57 regulatory protein (AlpA) HTH_26 PF13443.6 ORF99728 - 0.097 13.1 0.0 0.28 11.7 0.0 1.9 2 1 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Inositol_P PF00459.25 ORF99577 - 7.9e-22 78.0 0.1 8.7e-22 77.9 0.1 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family DUF3439 PF11921.8 ORF98585 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) cNMPbd_u2 PF16643.5 ORF97501 - 2.7 8.4 9.4 2.7 8.5 9.0 1.3 1 1 0 1 1 1 0 Unstructured region on cNMP-binding protein zf-Tim10_DDP PF02953.15 ORF96402 - 0.00034 20.2 0.1 0.00056 19.5 0.1 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Tachylectin PF14517.6 ORF9581 - 0.036 13.6 0.0 0.046 13.3 0.0 1.1 1 0 0 1 1 1 0 Tachylectin Ribosomal_S17e PF00833.18 ORF9512 - 3.5e-61 204.5 2.5 4e-61 204.3 2.5 1.0 1 0 0 1 1 1 1 Ribosomal S17 HTH_Tnp_1_2 PF13022.6 ORF9512 - 0.083 13.1 0.2 3.4 7.9 0.0 2.4 1 1 1 2 2 2 0 Helix-turn-helix of insertion element transposase TRAPPC-Trs85 PF12739.7 ORF94904 - 0.13 11.2 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit DUF1294 PF06961.13 ORF93761 - 1.5e-23 82.8 0.2 1.5e-23 82.8 0.2 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1294) Metal_resist PF13801.6 ORF93761 - 1 9.5 3.0 0.94 9.7 1.0 2.0 3 0 0 3 3 3 0 Heavy-metal resistance PARP PF00644.20 ORF92888 - 0.0012 18.5 2.2 0.0015 18.2 2.2 1.1 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DNA_pol_phi PF04931.13 ORF92888 - 2.9 5.9 7.3 3 5.8 7.3 1.1 1 0 0 1 1 1 0 DNA polymerase phi Ribosomal_L36 PF00444.18 ORF92805 - 0.14 12.3 0.9 0.24 11.6 0.9 1.3 1 0 0 1 1 1 0 Ribosomal protein L36 Pox_A31 PF05771.11 ORF91202 - 0.039 14.0 0.2 0.061 13.3 0.2 1.4 1 0 0 1 1 1 0 Poxvirus A31 protein CDC14 PF08045.11 ORF91202 - 0.044 12.9 0.1 0.064 12.4 0.1 1.2 1 0 0 1 1 1 0 Cell division control protein 14, SIN component Carbam_trans_C PF16861.5 ORF90911 - 0.15 11.6 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Carbamoyltransferase C-terminus Neuraminidase PF18413.1 ORF89360 - 0.086 12.5 3.0 0.11 12.1 3.0 1.2 1 0 0 1 1 1 0 Neuraminidase-like domain DUF2730 PF10805.8 ORF89360 - 0.11 12.6 3.2 0.19 11.9 3.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) Pox_Ag35 PF03286.14 ORF89360 - 0.19 11.5 8.5 0.24 11.2 8.5 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein APG6_N PF17675.1 ORF89360 - 0.69 10.4 13.1 0.85 10.2 13.1 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF89360 - 0.94 7.3 6.4 0.92 7.3 6.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2715 PF10895.8 ORF88585 - 0.016 14.9 1.0 0.02 14.5 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) zf-LITAF-like PF10601.9 ORF88413 - 6.8 7.0 11.7 3.5 8.0 9.0 2.0 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain Sif PF06767.11 ORF88184 - 0.0063 15.5 0.0 0.0076 15.3 0.0 1.1 1 0 0 1 1 1 1 Sif protein Toxin_35 PF10530.9 ORF88106 - 8.4 6.5 11.7 6.3 6.8 1.3 2.4 1 1 0 2 2 2 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold CoA_binding_2 PF13380.6 ORF88074 - 3.5e-12 46.8 0.0 4.2e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 CoA binding domain Cdd1 PF11731.8 ORF88074 - 0.0038 17.4 0.0 0.006 16.8 0.0 1.3 1 0 0 1 1 1 1 Pathogenicity locus TPP_enzyme_N PF02776.18 ORF88074 - 0.039 13.6 0.0 0.064 12.9 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LZ3wCH PF18517.1 ORF8727 - 0.44 10.7 1.3 0.72 10.0 1.3 1.3 1 0 0 1 1 1 0 Leucine zipper with capping helix domain DUF3343 PF11823.8 ORF86636 - 0.022 14.2 0.1 0.063 12.8 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) MORN PF02493.20 ORF86489 - 1.7e-07 30.7 5.8 0.00033 20.4 0.2 3.6 3 0 0 3 3 3 3 MORN repeat Silic_transp PF03842.13 ORF86489 - 0.16 10.2 0.1 0.18 10.1 0.1 1.1 1 0 0 1 1 1 0 Silicon transporter Haem_bd PF14376.6 ORF85671 - 0.043 13.8 0.6 0.13 12.2 0.0 1.8 1 1 1 2 2 2 0 Haem-binding domain Anti-TRAP PF15777.5 ORF85671 - 0.24 11.4 3.9 0.51 10.3 3.9 1.5 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein Hamartin PF04388.12 ORF85671 - 2.8 6.5 6.5 2.9 6.4 6.5 1.0 1 0 0 1 1 1 0 Hamartin protein Neur PF00064.18 ORF83593 - 0.054 12.3 0.1 0.067 12.0 0.1 1.1 1 0 0 1 1 1 0 Neuraminidase BC10 PF06726.12 ORF83593 - 0.17 12.1 0.7 14 6.0 0.0 2.2 2 0 0 2 2 2 0 Bladder cancer-related protein BC10 CCT PF06203.14 ORF82796 - 4.6e-07 29.8 6.0 1.1e-06 28.6 6.0 1.7 1 0 0 1 1 1 1 CCT motif DUF282 PF03380.14 ORF82318 - 0.1 12.6 0.2 3.1 7.8 0.1 2.3 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF282 DUF2238 PF09997.9 ORF81902 - 0.28 11.0 8.2 0.32 10.8 8.0 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2238) DUF1216 PF06746.11 ORF79796 - 0.002 18.1 1.6 0.002 18.1 1.6 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1216) NanE PF04131.14 ORF79796 - 0.039 13.1 1.3 0.053 12.7 0.8 1.5 1 1 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase Mem_trans PF03547.18 ORF79796 - 0.32 9.3 1.4 0.35 9.2 1.4 1.1 1 0 0 1 1 1 0 Membrane transport protein Phage_int_SAM_1 PF02899.17 ORF79650 - 0.069 13.5 0.5 0.11 12.8 0.5 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Peptidase_S28 PF05577.12 ORF79339 - 9.2e-17 60.9 0.0 1e-16 60.8 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Thioredoxin_7 PF13899.6 ORF79339 - 0.074 13.2 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like ADK PF00406.22 ORF78960 - 1.2e-08 35.2 0.0 2e-08 34.5 0.0 1.3 1 1 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF78960 - 4e-07 30.5 0.0 5.5e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain DUF2509 PF10713.9 ORF7828 - 3.4e-35 121.0 2.0 3.9e-35 120.8 2.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2509) Choline_sulf_C PF12411.8 ORF7828 - 0.2 11.5 2.7 0.17 11.8 1.1 1.6 1 1 1 2 2 2 0 Choline sulfatase enzyme C terminal DUF3091 PF11291.8 ORF7753 - 0.0062 16.7 1.2 0.0096 16.1 1.2 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3091) TetR_C_2 PF08361.11 ORF7753 - 0.02 15.0 0.2 0.026 14.6 0.2 1.4 1 0 0 1 1 1 0 MAATS-type transcriptional repressor, C-terminal region Helitron_like_N PF14214.6 ORF76522 - 0.068 13.4 0.1 0.082 13.1 0.1 1.3 1 1 0 1 1 1 0 Helitron helicase-like domain at N-terminus Glyco_tran_28_C PF04101.16 ORF75584 - 0.019 15.0 0.2 0.024 14.6 0.2 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 28 C-terminal domain DUF3439 PF11921.8 ORF73598 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) DUF2715 PF10895.8 ORF73495 - 0.016 14.9 1.0 0.02 14.5 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) zf_C2H2_13 PF18508.1 ORF72800 - 0.012 15.2 0.2 0.062 12.9 0.0 2.1 2 0 0 2 2 2 0 Zinc finger domain ERK-JNK_inhib PF15002.6 ORF72800 - 0.019 14.6 0.2 0.025 14.2 0.2 1.1 1 0 0 1 1 1 0 ERK and JNK pathways, inhibitor PRESAN PF09687.10 ORF72800 - 0.022 15.3 0.9 0.022 15.3 0.9 1.5 2 0 0 2 2 2 0 Plasmodium RESA N-terminal DAG_kinase_N PF14513.6 ORF72800 - 0.026 14.8 0.2 0.031 14.5 0.2 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus DUF3439 PF11921.8 ORF71892 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) PrcB_C PF14343.6 ORF70752 - 0.15 12.2 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 PrcB C-terminal RbsD_FucU PF05025.13 ORF70582 - 0.025 15.0 0.0 0.034 14.6 0.0 1.3 1 0 0 1 1 1 0 RbsD / FucU transport protein family Drc1-Sld2 PF11719.8 ORF6999 - 0.01 15.4 1.1 0.013 15.1 1.1 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein DEFB136 PF17333.2 ORF69543 - 0.18 11.8 1.6 0.45 10.5 1.6 1.7 1 1 0 1 1 1 0 Beta defensin 136 DUF4372 PF14294.6 ORF67056 - 0.042 14.0 0.0 0.078 13.1 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4372) ASFV_J13L PF05568.11 ORF6274 - 0.71 9.6 4.9 0.39 10.5 2.7 1.7 1 1 1 2 2 2 0 African swine fever virus J13L protein Sugar_tr PF00083.24 ORF62133 - 0.0012 17.8 0.5 0.0015 17.5 0.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter PTR2 PF00854.21 ORF62133 - 0.0086 14.9 0.1 0.01 14.7 0.1 1.1 1 0 0 1 1 1 1 POT family CCD PF07860.11 ORF61514 - 0.004 17.2 0.1 0.0053 16.8 0.1 1.1 1 0 0 1 1 1 1 WisP family C-Terminal Region DUF3439 PF11921.8 ORF60438 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) DUF3439 PF11921.8 ORF59494 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) V-SNARE_C PF12352.8 ORF59201 - 0.033 14.5 2.3 0.09 13.1 1.3 2.2 2 1 0 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus DUF4407 PF14362.6 ORF59201 - 0.046 13.1 19.1 0.051 12.9 19.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Exonuc_VII_L PF02601.15 ORF59201 - 0.053 13.1 9.3 0.059 12.9 9.3 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit CaM-KIIN PF15170.6 ORF59201 - 0.06 13.5 0.1 0.11 12.6 0.1 1.7 1 1 0 1 1 1 0 Calcium/calmodulin-dependent protein kinase II inhibitor RNA_pol_3_Rpc31 PF11705.8 ORF59201 - 0.22 11.7 17.0 0.25 11.6 17.0 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 Lant_dehydr_C PF14028.6 ORF59201 - 0.47 10.0 5.2 0.47 9.9 5.2 1.1 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term FAM60A PF15396.6 ORF59201 - 0.54 10.2 4.8 0.66 9.9 4.8 1.1 1 0 0 1 1 1 0 Protein Family FAM60A Fmp27_WPPW PF10359.9 ORF59201 - 0.71 8.7 8.5 0.81 8.5 8.5 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain NOA36 PF06524.12 ORF59201 - 0.97 8.7 11.2 1.2 8.4 11.2 1.3 1 0 0 1 1 1 0 NOA36 protein DUF4746 PF15928.5 ORF59201 - 1.1 8.6 10.8 1.3 8.4 10.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Uds1 PF15456.6 ORF59201 - 1.3 9.2 15.1 0.29 11.3 6.6 2.2 1 1 1 2 2 2 0 Up-regulated During Septation PTS_IIA PF02255.16 ORF59201 - 2.9 8.0 8.9 0.72 9.9 4.1 2.2 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit SAPS PF04499.15 ORF59201 - 3 6.5 10.9 3.4 6.3 10.9 1.0 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Presenilin PF01080.17 ORF59201 - 3 6.5 10.0 3.7 6.2 10.0 1.0 1 0 0 1 1 1 0 Presenilin TFIIA PF03153.13 ORF59201 - 3.2 7.7 16.5 4.2 7.3 16.5 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Myc_N PF01056.18 ORF59201 - 6.4 6.6 13.7 12 5.6 13.7 1.4 1 1 0 1 1 1 0 Myc amino-terminal region Nop25 PF09805.9 ORF59201 - 7.1 7.1 22.1 4.5 7.7 20.6 1.4 1 1 0 1 1 1 0 Nucleolar protein 12 (25kDa) V_ATPase_I PF01496.19 ORF59201 - 8 4.2 9.5 8.5 4.1 9.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF3619 PF12279.8 ORF59201 - 8.5 6.7 9.4 6.8 7.0 5.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3619) DUF5500 PF17604.2 ORF58816 - 0.11 12.6 1.6 0.12 12.5 0.4 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5500) YuiB PF14068.6 ORF57586 - 0.015 15.9 0.4 0.038 14.6 0.4 1.7 1 0 0 1 1 1 0 Putative membrane protein DUF4686 PF15742.5 ORF56370 - 0.0057 15.8 5.2 0.0099 15.1 1.7 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4686) CCDC92 PF14916.6 ORF56370 - 0.076 12.8 0.8 0.076 12.8 0.8 1.9 2 0 0 2 2 2 0 Coiled-coil domain of unknown function LsmAD PF06741.13 ORF56370 - 0.094 13.3 0.3 0.094 13.3 0.3 2.0 2 1 0 2 2 2 0 LsmAD domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks197.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks197.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks197.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks197.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- B2 PF11473.8 ORF55917 - 0.037 13.8 0.0 0.064 13.1 0.0 1.5 1 0 0 1 1 1 0 RNA binding protein B2 DUF4407 PF14362.6 ORF55157 - 0.33 10.3 5.0 0.36 10.1 5.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DDHD PF02862.17 ORF55157 - 0.9 9.7 5.2 1.1 9.4 5.2 1.0 1 0 0 1 1 1 0 DDHD domain AAA_11 PF13086.6 ORF55157 - 2 8.2 10.3 2.3 7.9 10.3 1.1 1 0 0 1 1 1 0 AAA domain ApbE PF02424.15 ORF54200 - 2.5e-33 115.7 0.0 2.8e-33 115.5 0.0 1.0 1 0 0 1 1 1 1 ApbE family Fis1_TPR_C PF14853.6 ORF54141 - 0.07 13.2 0.1 0.1 12.6 0.1 1.3 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat RCDG1 PF15725.5 ORF53363 - 0.79 10.2 4.2 16 6.0 0.9 2.2 2 0 0 2 2 2 0 Renal cancer differentiation gene 1 protein CCT PF06203.14 ORF53072 - 4.6e-07 29.8 6.0 1.1e-06 28.6 6.0 1.7 1 0 0 1 1 1 1 CCT motif Polysacc_deac_3 PF15421.6 ORF51141 - 0.022 13.3 0.8 0.029 12.9 0.6 1.3 1 1 0 1 1 1 0 Putative polysaccharide deacetylase BING4CT PF08149.11 ORF51141 - 0.085 12.7 0.4 0.25 11.1 0.4 1.8 2 0 0 2 2 2 0 BING4CT (NUC141) domain DUF4712 PF15830.5 ORF49856 - 0.0078 15.9 0.5 0.018 14.7 0.4 1.5 1 1 1 2 2 2 1 Domain of unknown function (DUF4712) VATC PF18716.1 ORF48651 - 0.045 13.6 6.4 0.49 10.3 0.3 2.9 3 0 0 3 3 3 0 Vms1-associating treble clef domain Orexin PF02072.15 ORF4806 - 1.1 9.2 6.9 1.5 8.8 6.4 1.4 1 1 0 1 1 1 0 Prepro-orexin Microtub_bd PF16796.5 ORF4655 - 0.0018 18.2 0.0 0.0028 17.6 0.0 1.3 1 0 0 1 1 1 1 Microtubule binding DUF3439 PF11921.8 ORF46469 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) End3 PF12761.7 ORF45509 - 0.0064 16.7 1.8 0.007 16.6 1.8 1.1 1 0 0 1 1 1 1 Actin cytoskeleton-regulatory complex protein END3 SRP14 PF02290.15 ORF44084 - 0.026 14.9 1.0 0.061 13.7 1.0 1.8 1 1 0 1 1 1 0 Signal recognition particle 14kD protein NAD_binding_2 PF03446.15 ORF44084 - 0.15 12.2 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase XRN1_D2_D3 PF18334.1 ORF44084 - 0.2 11.9 4.7 6.4 7.1 0.3 2.3 2 1 0 2 2 2 0 Exoribonuclease Xrn1 D2/D3 domain PEPcase PF00311.17 ORF44084 - 0.28 9.2 3.8 0.4 8.7 3.4 1.5 1 1 0 1 1 1 0 Phosphoenolpyruvate carboxylase EST1 PF10374.9 ORF44084 - 0.53 10.9 4.0 0.69 10.5 4.0 1.2 1 1 0 1 1 1 0 Telomerase activating protein Est1 TilS PF09179.11 ORF43067 - 0.014 15.8 4.8 0.014 15.8 4.8 1.9 2 0 0 2 2 2 0 TilS substrate binding domain DUF3439 PF11921.8 ORF42863 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Prok-RING_4 PF14447.6 ORF41668 - 0.1 12.5 1.8 0.17 11.8 1.1 1.8 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 DUF5354 PF17305.2 ORF41371 - 0.0074 16.5 0.6 0.011 15.9 0.6 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5354) VGLL4 PF15245.6 ORF39343 - 0.089 12.8 1.2 0.11 12.5 1.2 1.1 1 0 0 1 1 1 0 Transcription cofactor vestigial-like protein 4 Glyco_hydro_42C PF08533.10 ORF38142 - 0.057 13.1 1.7 5.2 6.9 0.1 3.0 3 0 0 3 3 3 0 Beta-galactosidase C-terminal domain MORN PF02493.20 ORF3803 - 0.033 14.1 1.6 0.12 12.3 0.4 2.4 2 0 0 2 2 2 0 MORN repeat zf-C2H2_3 PF13878.6 ORF3803 - 0.038 13.8 0.1 0.071 12.9 0.1 1.4 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO UPF0086 PF01868.16 ORF36486 - 0.0089 15.9 0.2 0.015 15.2 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function UPF0086 DUF4606 PF15379.6 ORF36486 - 0.026 14.8 3.2 0.037 14.3 3.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4606) HHH_6 PF14579.6 ORF34841 - 0.083 13.2 0.0 0.21 11.9 0.0 1.7 2 0 0 2 2 2 0 Helix-hairpin-helix motif Spore_YhaL PF14147.6 ORF34770 - 0.41 10.4 3.3 1 9.1 3.3 1.7 1 0 0 1 1 1 0 Sporulation protein YhaL PH_3 PF14593.6 ORF34676 - 7.1e-12 45.4 1.4 9e-12 45.0 1.4 1.1 1 0 0 1 1 1 1 PH domain PH PF00169.29 ORF34676 - 7.2e-06 26.5 0.3 1e-05 25.9 0.3 1.2 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF34676 - 0.00033 20.9 0.8 0.00044 20.5 0.8 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain PH_17 PF18012.1 ORF34676 - 0.019 14.7 0.0 0.35 10.6 0.0 2.2 2 0 0 2 2 2 0 PH domain PH_11 PF15413.6 ORF34676 - 0.043 14.2 2.0 1.6 9.2 2.0 2.1 1 1 0 1 1 1 0 Pleckstrin homology domain PH_2 PF08458.10 ORF34676 - 0.07 13.5 0.2 0.27 11.6 0.2 1.9 1 1 0 1 1 1 0 Plant pleckstrin homology-like region MycE_N PF17843.1 ORF34054 - 0.044 14.3 0.2 0.064 13.7 0.2 1.2 1 0 0 1 1 1 0 MycE methyltransferase N-terminal DUF3339 PF11820.8 ORF34054 - 4.3 7.6 8.5 0.27 11.4 2.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3339) DUF5527 PF17665.1 ORF34054 - 6.2 6.4 5.5 1.2 8.7 1.0 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5527) DUF4116 PF13475.6 ORF30050 - 8.7e-13 47.8 0.2 6.8e-08 32.1 0.0 3.1 3 0 0 3 3 3 2 Domain of unknown function (DUF4116) AAA_assoc_2 PF16193.5 ORF30050 - 0.02 15.3 0.9 0.03 14.7 0.8 1.4 1 1 0 1 1 1 0 AAA C-terminal domain Speriolin_C PF15059.6 ORF26593 - 0.013 15.6 0.4 0.015 15.4 0.4 1.2 1 0 0 1 1 1 0 Speriolin C-terminus Tachylectin PF14517.6 ORF23943 - 0.036 13.6 0.0 0.046 13.3 0.0 1.1 1 0 0 1 1 1 0 Tachylectin DUF2523 PF10734.9 ORF23912 - 0.036 14.6 2.1 0.048 14.2 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2523) STE3 PF02076.15 ORF21982 - 0.0069 15.6 0.2 0.0085 15.3 0.2 1.1 1 0 0 1 1 1 1 Pheromone A receptor Profilin PF00235.19 ORF21878 - 0.0086 16.3 0.1 0.017 15.4 0.1 1.4 1 1 0 1 1 1 1 Profilin Snapin_Pallidin PF14712.6 ORF21878 - 0.015 15.7 2.8 0.23 11.9 0.5 2.1 2 0 0 2 2 2 0 Snapin/Pallidin Metallothio PF00131.20 ORF21492 - 0.04 14.1 5.8 0.04 14.1 5.8 2.3 2 1 0 2 2 2 0 Metallothionein EF-hand_7 PF13499.6 ORF21364 - 1.4e-05 25.5 2.6 6.5e-05 23.3 0.3 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF21364 - 0.0007 19.3 0.6 0.011 15.6 0.0 2.9 3 1 0 3 3 3 1 EF-hand domain EFhand_Ca_insen PF08726.10 ORF21364 - 0.0012 18.9 0.1 0.0032 17.5 0.0 1.8 2 0 0 2 2 2 1 Ca2+ insensitive EF hand PHB_acc_N PF07879.11 ORF21364 - 0.013 15.6 0.0 0.032 14.3 0.0 1.6 1 0 0 1 1 1 0 PHB/PHA accumulation regulator DNA-binding domain Hum_adeno_E3A PF05393.11 ORF19229 - 0.42 10.6 3.4 0.91 9.5 3.4 1.7 1 1 0 1 1 1 0 Human adenovirus early E3A glycoprotein FSA_C PF10479.9 ORF19229 - 1.3 7.1 8.2 1.3 7.1 8.2 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF4834 PF16118.5 ORF19229 - 1.6 9.7 4.9 18 6.4 3.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) SSP160 PF06933.11 ORF19229 - 2 6.5 16.2 2.4 6.3 16.2 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 PX PF00787.24 ORF19167 - 1.4e-11 44.4 1.3 1.6e-11 44.2 1.3 1.1 1 0 0 1 1 1 1 PX domain DUF1232 PF06803.12 ORF18086 - 1.5e-10 40.7 5.4 2e-10 40.2 5.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) DUF1360 PF07098.11 ORF18086 - 0.029 14.3 0.2 0.046 13.7 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) DUF2019 PF09450.10 ORF18086 - 0.092 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2019) TRAPPC-Trs85 PF12739.7 ORF17715 - 0.13 11.2 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit GH43_C2 PF17851.1 ORF15204 - 3.8e-06 26.8 0.0 4.5e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Beta xylosidase C-terminal Concanavalin A-like domain PetG PF02529.15 ORF151040 - 1.4e-14 53.6 0.4 2.1e-14 53.1 0.4 1.3 1 0 0 1 1 1 1 Cytochrome B6-F complex subunit 5 UPF0114 PF03350.16 ORF151040 - 0.014 15.6 0.4 0.016 15.4 0.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 FtsX PF02687.21 ORF151040 - 1.3 9.6 6.7 0.067 13.7 1.3 1.6 2 0 0 2 2 2 0 FtsX-like permease family PrcB_C PF14343.6 ORF150646 - 0.15 12.2 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 PrcB C-terminal Phage_Integr_2 PF13009.6 ORF149479 - 0.059 12.5 0.8 0.064 12.4 0.8 1.0 1 0 0 1 1 1 0 Putative phage integrase RbsD_FucU PF05025.13 ORF14852 - 0.025 15.0 0.0 0.034 14.6 0.0 1.3 1 0 0 1 1 1 0 RbsD / FucU transport protein family Mem_trans PF03547.18 ORF145367 - 0.21 9.9 1.4 0.24 9.7 1.4 1.0 1 0 0 1 1 1 0 Membrane transport protein STE3 PF02076.15 ORF144553 - 0.0069 15.6 0.2 0.0085 15.3 0.2 1.1 1 0 0 1 1 1 1 Pheromone A receptor Peptidase_S78 PF04586.17 ORF144348 - 0.11 12.7 1.1 1.6 8.9 0.0 2.1 1 1 1 2 2 2 0 Caudovirus prohead serine protease ERGIC_N PF13850.6 ORF144348 - 0.13 12.6 1.2 0.21 11.9 0.5 1.7 1 1 1 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF937 PF06078.11 ORF143680 - 2.6e-11 44.3 4.8 3.2e-11 44.0 4.8 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF937) MarR_2 PF12802.7 ORF143680 - 0.16 11.9 0.1 1.1 9.2 0.0 2.1 2 0 0 2 2 2 0 MarR family CIDE-N PF02017.15 ORF143588 - 0.056 13.5 0.7 0.1 12.7 0.7 1.4 1 0 0 1 1 1 0 CIDE-N domain Voltage_CLC PF00654.20 ORF143498 - 0.00019 20.8 12.3 0.00023 20.6 12.3 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel G3P_acyltransf PF02660.15 ORF143498 - 2.6 8.1 11.2 3.6 7.6 11.2 1.2 1 1 0 1 1 1 0 Glycerol-3-phosphate acyltransferase HMG_box_2 PF09011.10 ORF142207 - 0.097 13.3 1.7 0.26 11.9 1.7 1.9 1 1 0 1 1 1 0 HMG-box domain HMG_box PF00505.19 ORF142207 - 0.2 12.1 1.0 0.42 11.1 1.0 1.5 1 0 0 1 1 1 0 HMG (high mobility group) box Sep15_SelM PF08806.11 ORF140225 - 0.0021 18.2 0.0 0.0032 17.6 0.0 1.3 1 0 0 1 1 1 1 Sep15/SelM redox domain Mac PF12464.8 ORF140225 - 0.23 11.7 0.1 0.23 11.7 0.1 1.6 2 0 0 2 2 2 0 Maltose acetyltransferase COPI_assoc PF08507.10 ORF139814 - 3.1e-16 59.6 17.2 3.6e-16 59.4 17.2 1.0 1 0 0 1 1 1 1 COPI associated protein DUF4231 PF14015.6 ORF139814 - 0.13 12.7 7.6 0.054 14.0 2.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) DUF4383 PF14325.6 ORF139814 - 0.39 11.0 11.0 0.64 10.3 0.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4383) YtpI PF14007.6 ORF139814 - 9.7 6.4 18.2 7.6 6.7 8.7 2.2 1 1 1 2 2 2 0 YtpI-like protein Reovirus_cap PF00979.17 ORF139433 - 0.23 10.6 0.0 0.29 10.3 0.0 1.1 1 0 0 1 1 1 0 Reovirus outer capsid protein, Sigma 3 EF-hand_6 PF13405.6 ORF139164 - 3e-12 45.4 1.2 0.00016 21.3 0.1 3.1 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF139164 - 3.1e-10 40.3 2.1 5.2e-10 39.6 2.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF139164 - 5.9e-10 38.0 5.0 0.00047 19.5 0.2 3.0 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF139164 - 0.0013 18.5 3.3 0.0013 18.5 3.3 2.3 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF139164 - 0.0042 16.5 3.1 0.1 12.1 0.7 2.7 2 0 0 2 2 2 1 EF hand EF-hand_9 PF14658.6 ORF139164 - 0.014 15.7 0.1 0.035 14.4 0.0 1.7 2 0 0 2 2 2 0 EF-hand domain PHD_3 PF13922.6 ORF137256 - 0.16 12.4 0.9 0.29 11.5 0.9 1.4 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx Sterol-sensing PF12349.8 ORF137012 - 0.017 14.9 0.3 0.04 13.7 0.3 1.5 1 1 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation O-antigen_lig PF13425.6 ORF135898 - 0.037 12.8 9.0 0.042 12.6 9.0 1.2 1 1 0 1 1 1 0 O-antigen ligase like membrane protein zf-RING_2 PF13639.6 ORF135605 - 1.8e-12 47.4 8.7 2.5e-12 46.9 8.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF135605 - 3.6e-11 43.2 5.6 6.1e-11 42.4 5.6 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF135605 - 2.4e-08 33.7 7.3 3.9e-08 33.0 7.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF135605 - 1.2e-07 31.6 7.8 1.7e-07 31.1 7.8 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF135605 - 2.4e-07 30.5 8.5 4.4e-07 29.6 8.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF135605 - 1.4e-06 28.1 5.8 1.9e-06 27.6 5.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF135605 - 1.8e-06 27.5 7.1 3.2e-06 26.8 7.1 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF135605 - 4.7e-05 23.4 5.1 0.0001 22.3 5.1 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF135605 - 0.00014 21.8 5.5 0.00024 21.0 5.5 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3H2C3 PF17122.5 ORF135605 - 0.00027 20.9 3.3 0.00055 19.9 3.3 1.5 1 1 0 1 1 1 1 Zinc-finger zf-RING_4 PF14570.6 ORF135605 - 0.0013 18.5 5.0 0.0021 17.8 5.0 1.3 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Zn_ribbon_17 PF17120.5 ORF135605 - 0.003 17.2 4.8 0.0043 16.6 4.8 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF135605 - 0.0039 17.0 5.8 0.0074 16.1 5.8 1.5 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-HC5HC2H_2 PF13832.6 ORF135605 - 0.01 16.0 3.9 0.021 15.0 3.9 1.5 1 1 0 1 1 1 0 PHD-zinc-finger like domain FANCL_C PF11793.8 ORF135605 - 0.017 15.3 9.1 0.12 12.6 9.0 2.2 1 1 1 2 2 2 0 FANCL C-terminal domain DUF1272 PF06906.11 ORF135605 - 0.02 15.0 2.8 0.032 14.3 2.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) RINGv PF12906.7 ORF135605 - 0.039 14.1 6.4 0.077 13.1 6.4 1.5 1 1 0 1 1 1 0 RING-variant domain zf-HC5HC2H PF13771.6 ORF135605 - 0.042 14.1 2.7 0.042 14.1 2.7 1.8 1 1 1 2 2 2 0 PHD-like zinc-binding domain Prok-RING_1 PF14446.6 ORF135605 - 0.046 13.6 3.5 1.7 8.7 0.1 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-TFIIIC PF12660.7 ORF135605 - 0.091 12.7 3.4 0.16 11.9 3.4 1.5 1 1 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex zf-C3HC4_4 PF15227.6 ORF135605 - 0.18 12.0 4.9 0.62 10.3 5.0 1.9 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_10 PF16685.5 ORF135605 - 0.51 10.5 6.4 2.8 8.2 6.8 1.9 1 1 1 2 2 2 0 zinc RING finger of MSL2 PHD PF00628.29 ORF135605 - 0.51 10.3 6.8 1 9.3 6.8 1.6 1 1 0 1 1 1 0 PHD-finger zf-RING-like PF08746.11 ORF135605 - 6.7 7.1 11.0 18 5.8 11.1 1.7 1 1 0 1 1 1 0 RING-like domain RIB43A PF05914.12 ORF135225 - 5.6e-10 38.5 17.7 8.6e-10 37.9 17.7 1.2 1 0 0 1 1 1 1 RIB43A PepSY_TM_like_2 PF16357.5 ORF135225 - 0.61 10.0 1.8 0.66 9.9 1.8 1.1 1 0 0 1 1 1 0 Putative PepSY_TM-like Gly_acyl_tr_N PF06021.11 ORF135225 - 0.89 9.6 8.4 1.2 9.2 8.4 1.1 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase HSP70 PF00012.20 ORF135225 - 1.5 6.9 11.8 1.6 6.8 11.8 1.0 1 0 0 1 1 1 0 Hsp70 protein MPM1 PF17234.2 ORF135225 - 2.1 8.6 14.7 3.1 8.0 14.7 1.2 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 Multi-haem_cyto PF13447.6 ORF134600 - 0.27 10.5 4.6 0.32 10.2 4.6 1.0 1 0 0 1 1 1 0 Seven times multi-haem cytochrome CxxCH MS_channel PF00924.18 ORF134442 - 1.8e-28 99.5 0.4 2.1e-28 99.3 0.4 1.0 1 0 0 1 1 1 1 Mechanosensitive ion channel Stc1 PF12898.7 ORF134161 - 9.3e-06 26.1 1.7 1.3e-05 25.6 1.7 1.3 1 0 0 1 1 1 1 Stc1 domain His_Me_b4a2 PF18275.1 ORF134161 - 0.0063 16.6 3.3 0.012 15.7 3.3 1.4 1 0 0 1 1 1 1 His-Me finger endonuclease beta4-alpha2 domain DUF489 PF04356.12 ORF133643 - 0.0051 16.8 0.4 0.0058 16.7 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF489) DUF2681 PF10883.8 ORF133643 - 0.089 13.2 0.1 0.13 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) Aminotran_1_2 PF00155.21 ORF133280 - 1.3e-11 44.3 0.0 1.4e-11 44.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Speriolin_C PF15059.6 ORF133280 - 0.0032 17.6 0.0 0.0056 16.8 0.0 1.4 1 0 0 1 1 1 1 Speriolin C-terminus Flg_hook PF02120.16 ORF133280 - 0.017 15.0 0.1 0.037 13.9 0.0 1.5 2 0 0 2 2 2 0 Flagellar hook-length control protein FliK CDtoxinA PF03498.14 ORF133150 - 0.1 12.2 1.8 0.13 11.9 1.8 1.4 1 1 0 1 1 1 0 Cytolethal distending toxin A/C domain Ribosomal_L36e PF01158.18 ORF132338 - 2.1e-26 92.0 1.9 2.1e-26 92.0 1.9 1.7 1 1 1 2 2 2 1 Ribosomal protein L36e Lsr2 PF11774.8 ORF130797 - 0.097 12.8 0.2 0.13 12.4 0.2 1.3 1 0 0 1 1 1 0 Lsr2 RbsD_FucU PF05025.13 ORF130520 - 0.025 15.0 0.0 0.034 14.6 0.0 1.3 1 0 0 1 1 1 0 RbsD / FucU transport protein family YuiB PF14068.6 ORF130292 - 0.015 15.9 0.4 0.038 14.6 0.4 1.7 1 0 0 1 1 1 0 Putative membrane protein Waikav_capsid_1 PF12264.8 ORF130208 - 0.083 12.4 1.5 0.081 12.4 0.6 1.4 1 1 0 1 1 1 0 Waikavirus capsid protein 1 DUF3792 PF12670.7 ORF129822 - 2.9 8.1 11.5 0.064 13.4 2.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3792) CDtoxinA PF03498.14 ORF129789 - 0.1 12.2 1.8 0.13 11.9 1.8 1.4 1 1 0 1 1 1 0 Cytolethal distending toxin A/C domain MORN PF02493.20 ORF129142 - 3.4e-18 64.4 19.5 7.4e-07 28.7 0.3 4.1 5 0 0 5 5 5 3 MORN repeat DUF1107 PF06526.12 ORF129142 - 0.27 11.2 1.9 3.2 7.7 0.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF1107) Ribosomal_S3_C PF00189.20 ORF128712 - 0.003 18.0 0.0 0.0043 17.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain HIT PF01230.23 ORF128588 - 2.9e-22 79.2 0.0 4e-22 78.8 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 ORF128588 - 5.9e-07 30.0 0.0 6.6e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 ORF128588 - 0.0018 18.1 0.0 0.0036 17.2 0.0 1.5 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 HTH_54 PF18607.1 ORF128282 - 0.035 14.2 1.3 0.55 10.3 0.7 2.1 2 0 0 2 2 2 0 ParA helix turn helix domain Phage_1_1 PF08200.11 ORF128282 - 1.9 8.9 5.0 2.7 8.5 0.4 2.7 3 0 0 3 3 3 0 Bacteriophage 1.1 Protein DUF5542 PF17696.1 ORF127134 - 0.27 11.4 2.8 17 5.6 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5542) SDH_sah PF01972.16 ORF123580 - 0.067 12.2 0.0 0.084 11.9 0.0 1.1 1 0 0 1 1 1 0 Serine dehydrogenase proteinase Prok-E2_A PF14457.6 ORF122860 - 0.039 13.6 0.0 0.052 13.2 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family A Ribosomal_L34 PF00468.17 ORF122860 - 0.11 12.5 1.4 0.19 11.7 1.4 1.3 1 0 0 1 1 1 0 Ribosomal protein L34 DUF2617 PF10936.8 ORF122356 - 0.17 12.0 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF2617 DUF2457 PF10446.9 ORF12208 - 0.19 10.8 5.0 0.21 10.7 5.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF2715 PF10895.8 ORF121600 - 0.016 14.9 1.0 0.02 14.5 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) HHH_3 PF12836.7 ORF120864 - 0.11 12.8 0.8 0.2 12.0 0.2 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix motif Interferon PF00143.19 ORF118530 - 0.032 14.4 0.7 0.044 14.0 0.7 1.1 1 0 0 1 1 1 0 Interferon alpha/beta domain GOLD_2 PF13897.6 ORF118530 - 0.24 11.9 1.6 0.31 11.5 1.6 1.2 1 0 0 1 1 1 0 Golgi-dynamics membrane-trafficking CENP-B_dimeris PF09026.10 ORF118530 - 0.27 11.6 8.3 0.4 11.1 8.3 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain Nop14 PF04147.12 ORF118530 - 0.28 9.3 7.2 0.27 9.4 7.2 1.0 1 0 0 1 1 1 0 Nop14-like family TAXi_N PF14543.6 ORF116103 - 0.034 14.4 2.1 0.035 14.4 2.1 1.2 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal GD_N PF16030.5 ORF116080 - 0.06 13.7 0.3 0.08 13.2 0.3 1.3 1 0 0 1 1 1 0 Serine protease gd N-terminus Tmemb_cc2 PF10267.9 ORF115824 - 0.016 14.4 5.7 0.016 14.4 5.7 1.0 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein DUF1980 PF09323.10 ORF115824 - 5.3 6.9 6.0 7.1 6.5 6.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) UPF0147 PF03685.13 ORF115623 - 0.055 13.5 0.5 0.082 13.0 0.5 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) Peptidase_A17 PF05380.13 ORF115623 - 0.13 12.3 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Pao retrotransposon peptidase MORN PF02493.20 ORF115405 - 1.6e-26 90.6 36.4 5.6e-07 29.1 2.7 6.2 6 0 0 6 6 6 6 MORN repeat Phage_lysozyme2 PF18013.1 ORF115405 - 3 7.9 10.3 1.5e+02 2.4 10.3 2.8 1 1 0 1 1 1 0 Phage tail lysozyme STE3 PF02076.15 ORF113519 - 0.0069 15.6 0.2 0.0085 15.3 0.2 1.1 1 0 0 1 1 1 1 Pheromone A receptor zf-C3HC4_4 PF15227.6 ORF113346 - 0.14 12.3 0.0 0.26 11.5 0.0 1.4 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING DUF3439 PF11921.8 ORF112743 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) DUF3634 PF12321.8 ORF11067 - 0.097 13.1 0.1 0.38 11.2 0.0 2.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3634) IF4E PF01652.18 ORF110282 - 3.6e-13 49.6 4.4 6.1e-13 48.9 4.4 1.4 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E HTH_1 PF00126.27 ORF109532 - 0.014 15.3 1.1 0.038 14.0 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family RbsD_FucU PF05025.13 ORF108333 - 0.025 15.0 0.0 0.034 14.6 0.0 1.3 1 0 0 1 1 1 0 RbsD / FucU transport protein family DUF3439 PF11921.8 ORF108026 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) PHD_3 PF13922.6 ORF106997 - 0.16 12.4 0.9 0.29 11.5 0.9 1.4 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx DUF3117 PF11314.8 ORF106991 - 0.095 12.5 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3117) zf-CRD PF17979.1 ORF106984 - 0.48 10.5 10.3 2.8 8.0 0.5 2.2 2 0 0 2 2 2 0 Cysteine rich domain with multizinc binding regions CFEM PF05730.11 ORF106213 - 0.38 10.9 5.6 0.68 10.1 5.6 1.3 1 0 0 1 1 1 0 CFEM domain DUF3439 PF11921.8 ORF105568 - 0.037 14.0 0.6 0.051 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Toxin_GhoT_OrtT PF10753.9 ORF105245 - 1.1 9.6 4.3 68 3.8 0.1 3.7 4 0 0 4 4 4 0 Toxin GhoT_OrtT YuiB PF14068.6 ORF104284 - 0.015 15.9 0.4 0.038 14.6 0.4 1.7 1 0 0 1 1 1 0 Putative membrane protein DUF3972 PF13118.6 ORF102897 - 0.036 14.5 2.4 0.052 14.0 2.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3972) Ras PF00071.22 ORF102367 - 7.9e-27 93.8 0.2 9e-27 93.7 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF102367 - 1.3e-23 83.5 0.1 1.5e-23 83.3 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF102367 - 6e-12 45.4 0.0 7.5e-12 45.0 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF102367 - 1.9e-06 27.9 0.0 2.1e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF102367 - 2.8e-05 23.6 0.0 3.5e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region NTPase_1 PF03266.15 ORF102367 - 7.8e-05 22.7 0.0 9.3e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 NTPase AAA_22 PF13401.6 ORF102367 - 0.00018 21.8 0.0 0.00037 20.8 0.0 1.6 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 ORF102367 - 0.00019 21.8 0.0 0.0002 21.8 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SRPRB PF09439.10 ORF102367 - 0.00024 20.6 0.0 0.00028 20.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit ABC_tran PF00005.27 ORF102367 - 0.00025 21.6 0.0 0.00027 21.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 ORF102367 - 0.00047 20.1 0.0 0.065 13.1 0.0 2.0 1 1 1 2 2 2 1 RsgA GTPase AAA_14 PF13173.6 ORF102367 - 0.00062 19.8 0.1 0.00093 19.2 0.1 1.5 1 1 0 1 1 1 1 AAA domain Septin PF00735.18 ORF102367 - 0.0016 17.8 0.0 0.0019 17.6 0.0 1.1 1 0 0 1 1 1 1 Septin PduV-EutP PF10662.9 ORF102367 - 0.0017 18.1 0.1 0.0028 17.4 0.1 1.5 2 0 0 2 2 1 1 Ethanolamine utilisation - propanediol utilisation AAA_33 PF13671.6 ORF102367 - 0.0017 18.5 0.0 0.0019 18.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF102367 - 0.0018 18.0 0.1 0.0021 17.8 0.1 1.3 1 1 0 1 1 1 1 AAA domain Sigma54_activ_2 PF14532.6 ORF102367 - 0.0025 17.9 0.0 0.013 15.6 0.0 1.9 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_28 PF13521.6 ORF102367 - 0.0026 18.0 0.0 0.0031 17.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF102367 - 0.0026 18.1 0.0 0.0041 17.5 0.0 1.4 1 0 0 1 1 1 1 RNA helicase AAA_18 PF13238.6 ORF102367 - 0.0034 17.9 0.0 0.0039 17.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain G-alpha PF00503.20 ORF102367 - 0.0063 15.7 0.1 0.0094 15.1 0.1 1.3 1 1 0 1 1 1 1 G-protein alpha subunit NB-ARC PF00931.22 ORF102367 - 0.0085 15.3 0.2 0.0096 15.1 0.2 1.3 1 1 0 1 1 1 1 NB-ARC domain Sigma54_activat PF00158.26 ORF102367 - 0.012 15.4 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain TniB PF05621.11 ORF102367 - 0.014 14.9 0.0 0.017 14.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein AAA_7 PF12775.7 ORF102367 - 0.015 14.8 0.0 0.021 14.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 ORF102367 - 0.016 15.2 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 ORF102367 - 0.016 15.1 0.0 0.017 15.0 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_16 PF13191.6 ORF102367 - 0.019 15.4 0.0 0.021 15.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 ORF102367 - 0.021 14.8 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 ORF102367 - 0.026 14.5 0.0 0.04 13.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 ORF102367 - 0.036 13.7 0.0 0.046 13.4 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain 6PF2K PF01591.18 ORF102367 - 0.041 13.2 0.3 1.4 8.2 0.3 2.1 1 1 0 1 1 1 0 6-phosphofructo-2-kinase Rad51 PF08423.11 ORF102367 - 0.042 13.1 0.0 0.051 12.8 0.0 1.2 1 0 0 1 1 1 0 Rad51 AAA_23 PF13476.6 ORF102367 - 0.12 12.9 0.9 0.16 12.4 0.9 1.4 1 1 0 1 1 1 0 AAA domain FeoB_N PF02421.18 ORF102367 - 0.13 11.8 0.1 0.17 11.4 0.1 1.5 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_15 PF13175.6 ORF102367 - 0.14 11.9 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 ORF102367 - 0.14 12.1 0.6 0.37 10.7 0.5 1.7 1 1 1 2 2 2 0 Rad17 P-loop domain AAA_17 PF13207.6 ORF102367 - 0.15 12.5 0.0 0.24 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF1644 PF07800.12 ORF102059 - 0.0017 18.4 1.6 0.0018 18.3 1.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1644) DUF3654 PF12376.8 ORF102059 - 0.0018 18.5 0.5 1.1 9.5 0.1 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF3654) STI1 PF17830.1 ORF102059 - 0.86 9.6 4.4 57 3.7 0.3 3.4 3 0 0 3 3 3 0 STI1 domain HTH_24 PF13412.6 ORF100739 - 0.17 11.4 0.1 1.6 8.4 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Myb_DNA-binding PF00249.31 ORF100195 - 0.1 12.8 0.1 0.42 10.9 0.0 2.0 3 0 0 3 3 3 0 Myb-like DNA-binding domain HAP2-GCS1 PF10699.9 ORF10011 - 0.033 14.2 0.2 0.05 13.6 0.2 1.3 1 0 0 1 1 1 0 Male gamete fusion factor DUF2776 PF10951.8 NODE_48399_length_391_cov_1.660112_g40523_i0forward_frame_1 - 2.2e-31 109.4 4.0 2.8e-31 109.1 4.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2776) B2-adapt-app_C PF09066.10 NODE_48391_length_391_cov_2.252809_g40515_i0reverse_frame_1 - 0.0041 17.2 0.5 0.0053 16.8 0.5 1.2 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain ketoacyl-synt PF00109.26 NODE_48390_length_391_cov_2.325843_g40514_i0reverse_frame_1 - 7.2e-16 58.5 0.0 8.4e-16 58.3 0.0 1.1 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Toxin_15 PF07906.13 NODE_48386_length_391_cov_2.530899_g40510_i0forward_frame_1 - 6e-48 163.8 0.0 6.5e-48 163.7 0.0 1.0 1 0 0 1 1 1 1 ShET2 enterotoxin, N-terminal region Lamprin PF06403.11 NODE_48381_length_391_cov_3.143258_g40505_i0forward_frame_1 - 1.6 8.7 13.2 4.2 7.3 13.2 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_48372_length_391_cov_10.491573_g40496_i0reverse_frame_1 - 0.043 13.8 13.2 0.69 9.9 2.3 3.0 1 1 2 3 3 3 0 Lamprin PriCT_1 PF08708.11 NODE_48371_length_391_cov_35.727528_g40495_i0forward_frame_1 - 0.1 12.3 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) DUF997 PF06196.12 NODE_48361_length_391_cov_80.483146_g40485_i0forward_frame_1 - 1.9 8.5 8.4 5.3 7.1 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF997) GRIN_C PF15235.6 NODE_48359_length_391_cov_82.898876_g40483_i0reverse_frame_1 - 0.054 13.7 0.1 0.075 13.3 0.1 1.2 1 0 0 1 1 1 0 G protein-regulated inducer of neurite outgrowth C-terminus Alg14 PF08660.11 NODE_48359_length_391_cov_82.898876_g40483_i0forward_frame_1 - 0.083 12.8 0.5 0.1 12.5 0.5 1.1 1 0 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like mRNA_cap_enzyme PF01331.19 NODE_48353_length_391_cov_99.682584_g40477_i0forward_frame_1 - 0.029 14.2 0.1 0.032 14.1 0.1 1.2 1 0 0 1 1 1 0 mRNA capping enzyme, catalytic domain BLM10_mid PF16507.5 NODE_48353_length_391_cov_99.682584_g40477_i0forward_frame_1 - 0.082 11.5 0.0 0.093 11.4 0.0 1.0 1 0 0 1 1 1 0 Proteasome-substrate-size regulator, mid region Beta_helix PF13229.6 NODE_48351_length_391_cov_110.592697_g40475_i0forward_frame_1 - 0.0005 19.9 1.6 0.00067 19.5 1.6 1.2 1 0 0 1 1 1 1 Right handed beta helix region DGF-1_5 PF11038.8 NODE_48351_length_391_cov_110.592697_g40475_i0forward_frame_1 - 0.072 12.4 0.3 0.093 12.1 0.3 1.1 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 Ribosomal_L35Ae PF01247.18 NODE_48333_length_391_cov_549.446629_g40458_i0forward_frame_1 - 2.2e-35 120.7 3.0 3.5e-35 120.0 3.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L35Ae Dynein_light PF01221.18 NODE_48331_length_391_cov_1621.949438_g40456_i0reverse_frame_1 - 3.5e-07 30.5 1.2 6.2e-07 29.6 0.5 1.7 2 0 0 2 2 2 1 Dynein light chain type 1 Dicer_dimer PF03368.14 NODE_48331_length_391_cov_1621.949438_g40456_i0forward_frame_1 - 0.043 14.0 0.2 0.067 13.4 0.2 1.3 1 0 0 1 1 1 0 Dicer dimerisation domain Terminase_6 PF03237.15 NODE_48326_length_392_cov_1.523810_g40452_i0reverse_frame_1 - 0.016 14.9 0.0 0.02 14.5 0.0 1.1 1 0 0 1 1 1 0 Terminase-like family ASF1_hist_chap PF04729.13 NODE_48325_length_392_cov_1.565826_g40451_i0forward_frame_1 - 1.2e-27 96.8 0.1 1.4e-27 96.6 0.1 1.1 1 0 0 1 1 1 1 ASF1 like histone chaperone Shisa PF13908.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.0048 17.2 0.0 0.0083 16.4 0.0 1.4 1 1 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF4834 PF16118.5 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.0059 17.5 1.3 0.0095 16.9 1.3 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4834) Piezo_RRas_bdg PF12166.8 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.017 14.4 0.1 0.021 14.2 0.1 1.1 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain SARAF PF06682.12 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.024 14.3 0.0 0.03 14.0 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis TMEM154 PF15102.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.025 14.5 0.2 0.025 14.5 0.2 1.8 1 1 0 2 2 2 0 TMEM154 protein family EphA2_TM PF14575.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.036 14.9 1.0 0.091 13.7 1.0 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Serinc PF03348.15 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.041 12.8 0.1 0.048 12.6 0.1 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) SCIMP PF15050.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.041 14.3 0.2 0.054 13.9 0.2 1.2 1 0 0 1 1 1 0 SCIMP protein TMEMspv1-c74-12 PF11044.8 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.056 13.4 2.0 0.12 12.3 2.0 1.5 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Comm PF15957.5 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.11 12.8 1.9 0.2 12.0 1.9 1.5 1 1 0 1 1 1 0 Commissureless LRR19-TM PF15176.6 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.38 10.8 8.8 1.9 8.5 8.4 2.2 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Baculo_11_kDa PF06143.11 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_1 - 0.74 9.4 5.5 0.1 12.2 0.9 1.9 2 0 0 2 2 2 0 Baculovirus 11 kDa family DAZAP2 PF11029.8 NODE_48316_length_392_cov_1.966387_g40442_i0reverse_frame_1 - 0.033 15.1 0.0 0.043 14.7 0.0 1.1 1 0 0 1 1 1 0 DAZ associated protein 2 (DAZAP2) TTL PF03133.15 NODE_48308_length_392_cov_3.114846_g40434_i0reverse_frame_1 - 4.7e-26 91.6 0.3 5.3e-26 91.4 0.3 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Atg14 PF10186.9 NODE_48308_length_392_cov_3.114846_g40434_i0reverse_frame_1 - 0.041 13.0 0.0 0.041 13.0 0.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Clp_N PF02861.20 NODE_48308_length_392_cov_3.114846_g40434_i0reverse_frame_1 - 0.044 13.9 0.0 0.069 13.3 0.0 1.3 1 0 0 1 1 1 0 Clp amino terminal domain, pathogenicity island component Presenilin PF01080.17 NODE_48301_length_392_cov_19.240896_g40427_i0forward_frame_1 - 0.084 11.6 1.9 0.099 11.4 1.9 1.0 1 0 0 1 1 1 0 Presenilin Pro-NT_NN PF07421.11 NODE_48301_length_392_cov_19.240896_g40427_i0forward_frame_1 - 0.1 12.9 2.7 0.12 12.6 2.7 1.1 1 0 0 1 1 1 0 Neurotensin/neuromedin N precursor AIF_C PF14721.6 NODE_48301_length_392_cov_19.240896_g40427_i0forward_frame_1 - 0.5 10.7 12.5 14 6.1 12.5 2.1 1 1 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term Herpes_UL25 PF01499.16 NODE_48297_length_392_cov_58.983193_g40423_i0forward_frame_1 - 0.021 13.4 6.5 0.027 13.0 6.5 1.0 1 0 0 1 1 1 0 Herpesvirus UL25 family IF-2B PF01008.17 NODE_48297_length_392_cov_58.983193_g40423_i0forward_frame_1 - 0.064 12.5 1.5 0.072 12.3 1.5 1.1 1 0 0 1 1 1 0 Initiation factor 2 subunit family Iron_permease PF04120.12 NODE_48297_length_392_cov_58.983193_g40423_i0forward_frame_1 - 7.4 6.4 6.2 11 5.8 6.2 1.4 1 1 0 1 1 1 0 Low affinity iron permease Curto_V3 PF07436.11 NODE_48293_length_392_cov_71.434174_g40419_i0reverse_frame_1 - 0.13 12.7 0.2 0.2 12.1 0.2 1.3 1 0 0 1 1 1 0 Curtovirus V3 protein zf-C3HC4_3 PF13920.6 NODE_48292_length_392_cov_73.529412_g40418_i0forward_frame_1 - 4.6e-14 52.0 10.9 4.6e-14 52.0 10.9 1.9 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_48292_length_392_cov_73.529412_g40418_i0forward_frame_1 - 3.7e-08 33.1 13.1 5.5e-08 32.6 12.5 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 NODE_48292_length_392_cov_73.529412_g40418_i0forward_frame_1 - 3e-05 24.2 14.5 3e-05 24.2 14.5 1.8 3 0 0 3 3 3 1 Ring finger domain zf-RING_5 PF14634.6 NODE_48292_length_392_cov_73.529412_g40418_i0forward_frame_1 - 0.00071 19.5 11.9 0.00071 19.5 11.9 1.8 3 0 0 3 3 3 1 zinc-RING finger domain DUF1644 PF07800.12 NODE_48292_length_392_cov_73.529412_g40418_i0forward_frame_1 - 1.5 8.8 10.4 21 5.2 5.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1644) zf-RING_4 PF14570.6 NODE_48292_length_392_cov_73.529412_g40418_i0forward_frame_1 - 3.3 7.6 14.2 1.1 9.0 9.6 2.5 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain FNIP PF05725.12 NODE_48285_length_392_cov_109.431373_g40412_i0forward_frame_1 - 0.01 16.0 0.4 0.017 15.3 0.4 1.3 1 0 0 1 1 1 0 FNIP Repeat ubiquitin PF00240.23 NODE_48285_length_392_cov_109.431373_g40412_i0forward_frame_1 - 0.028 14.1 0.0 0.16 11.8 0.0 2.1 2 0 0 2 2 2 0 Ubiquitin family DUF1874 PF08960.10 NODE_48285_length_392_cov_109.431373_g40412_i0forward_frame_1 - 0.14 12.3 0.0 0.23 11.6 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1874) Helicase_C PF00271.31 NODE_48265_length_392_cov_270.865546_g40392_i0forward_frame_1 - 0.0069 16.7 0.0 0.01 16.2 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DUF5410 PF17422.2 NODE_48255_length_393_cov_1.837989_g40383_i0reverse_frame_1 - 0.22 10.7 2.9 0.18 11.0 1.2 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5410) CAF1-p150_C2 PF15539.6 NODE_48246_length_393_cov_2.511173_g40374_i0reverse_frame_1 - 0.042 13.3 0.2 0.054 13.0 0.2 1.1 1 0 0 1 1 1 0 CAF1 complex subunit p150, region binding to CAF1-p60 at C-term DUF3079 PF11278.8 NODE_48245_length_393_cov_2.773743_g40373_i0forward_frame_1 - 0.037 13.8 0.5 0.079 12.8 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3079) DUF3938 PF13074.6 NODE_48241_length_393_cov_3.053073_g40369_i0reverse_frame_1 - 0.093 13.0 0.2 0.33 11.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3938) Blt1_C PF17183.4 NODE_48240_length_393_cov_3.251397_g40368_i0reverse_frame_1 - 0.1 12.2 0.1 0.24 11.0 0.0 1.7 2 0 0 2 2 2 0 Get5 carboxyl domain SLBB PF10531.9 NODE_48236_length_393_cov_3.575419_g40364_i0reverse_frame_1 - 0.07 13.0 0.0 0.16 11.8 0.0 1.6 2 0 0 2 2 2 0 SLBB domain YvrJ PF12841.7 NODE_48233_length_393_cov_17.754190_g40361_i0reverse_frame_1 - 0.059 12.9 0.1 0.18 11.3 0.1 1.9 1 0 0 1 1 1 0 YvrJ protein family RecG_wedge PF17191.4 NODE_48231_length_393_cov_44.550279_g40359_i0reverse_frame_1 - 0.01 15.5 0.1 0.027 14.1 0.0 1.9 1 1 0 1 1 1 0 RecG wedge domain Pkinase PF00069.25 NODE_48225_length_393_cov_70.555866_g40353_i0forward_frame_1 - 2.6e-06 27.0 0.0 3.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_48225_length_393_cov_70.555866_g40353_i0forward_frame_1 - 0.00016 21.1 0.0 0.0002 20.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF515 PF04415.12 NODE_48217_length_393_cov_81.703911_g40345_i0reverse_frame_1 - 0.6 8.5 1.9 0.76 8.1 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) EIN3 PF04873.13 NODE_48217_length_393_cov_81.703911_g40345_i0forward_frame_1 - 3.5 6.8 5.7 4.3 6.6 5.7 1.3 1 1 0 1 1 1 0 Ethylene insensitive 3 DUF5542 PF17696.1 NODE_48217_length_393_cov_81.703911_g40345_i0forward_frame_1 - 9.6 6.4 6.0 13 6.0 4.6 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5542) DUF2768 PF10966.8 NODE_48214_length_393_cov_87.248603_g40342_i0forward_frame_1 - 8.1 7.0 10.7 2 8.9 6.6 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2768) TPR_12 PF13424.6 NODE_48209_length_393_cov_111.117318_g40337_i0forward_frame_1 - 0.034 14.4 3.7 0.053 13.8 3.7 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_48209_length_393_cov_111.117318_g40337_i0forward_frame_1 - 0.21 11.8 3.4 3.4 8.0 0.2 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_48209_length_393_cov_111.117318_g40337_i0forward_frame_1 - 3.5 8.7 11.2 0.45 11.5 2.6 3.1 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF4392 PF14336.6 NODE_48207_length_393_cov_122.053073_g40335_i0reverse_frame_1 - 1.5e-09 37.7 0.0 1.8e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4392) Tubulin_2 PF13809.6 NODE_48205_length_393_cov_123.243017_g40333_i0forward_frame_1 - 0.14 11.4 0.2 0.17 11.1 0.2 1.0 1 0 0 1 1 1 0 Tubulin like Cloacin_immun PF03513.14 NODE_48199_length_393_cov_151.916201_g40327_i0reverse_frame_1 - 0.003 17.8 1.1 0.29 11.5 0.2 2.2 1 1 1 2 2 2 2 Cloacin immunity protein RseC_MucC PF04246.12 NODE_48199_length_393_cov_151.916201_g40327_i0reverse_frame_1 - 0.47 10.4 2.0 0.64 10.0 2.0 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Peptidase_S32 PF05579.13 NODE_48196_length_393_cov_192.360335_g40324_i0forward_frame_1 - 0.24 10.6 0.0 7.6 5.6 0.0 2.0 2 0 0 2 2 2 0 Equine arteritis virus serine endopeptidase S32 ABC2_membrane_3 PF12698.7 NODE_48179_length_394_cov_1.161560_g40308_i0reverse_frame_3 - 5.4 6.0 18.5 5.6 6.0 18.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Bac_export_2 PF01312.19 NODE_48179_length_394_cov_1.161560_g40308_i0reverse_frame_3 - 8.1 5.5 7.3 10 5.2 7.3 1.1 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family STT3_PglB_C PF18527.1 NODE_48179_length_394_cov_1.161560_g40308_i0forward_frame_3 - 0.0026 17.8 0.2 0.0067 16.5 0.2 1.6 1 0 0 1 1 1 1 STT3/PglB C-terminal beta-barrel domain Ureide_permease PF07168.11 NODE_48179_length_394_cov_1.161560_g40308_i0forward_frame_3 - 0.22 10.2 1.1 0.24 10.1 1.1 1.1 1 0 0 1 1 1 0 Ureide permease CRIC_ras_sig PF10534.9 NODE_48178_length_394_cov_1.292479_g40307_i0reverse_frame_3 - 0.056 13.6 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 Connector enhancer of kinase suppressor of ras Peptidase_S24 PF00717.23 NODE_48178_length_394_cov_1.292479_g40307_i0reverse_frame_3 - 0.057 13.4 0.0 0.08 12.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase S24-like DUF4491 PF14898.6 NODE_48175_length_394_cov_1.713092_g40304_i0forward_frame_3 - 0.14 12.6 3.1 0.094 13.2 1.4 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4491) DUF3325 PF11804.8 NODE_48174_length_394_cov_1.746518_g40303_i0reverse_frame_2 - 0.082 13.1 0.2 0.12 12.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) PPDFL PF15060.6 NODE_48174_length_394_cov_1.746518_g40303_i0forward_frame_2 - 0.087 13.4 0.7 0.16 12.5 0.5 1.5 1 1 1 2 2 2 0 Differentiation and proliferation regulator Trypan_PARP PF05887.11 NODE_48173_length_394_cov_1.857939_g40302_i0forward_frame_3 - 5.4 7.0 9.9 7.7 6.5 9.9 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) MCPVI PF02993.14 NODE_48173_length_394_cov_1.857939_g40302_i0forward_frame_2 - 0.042 13.7 2.2 0.051 13.4 2.2 1.0 1 0 0 1 1 1 0 Minor capsid protein VI Shadoo PF14999.6 NODE_48172_length_394_cov_2.061281_g40301_i0forward_frame_3 - 0.029 14.5 6.6 0.039 14.0 6.6 1.2 1 0 0 1 1 1 0 Shadow of prion protein, neuroprotective Gaa1 PF04114.14 NODE_48171_length_394_cov_2.295265_g40300_i0forward_frame_3 - 0.036 13.1 4.4 0.045 12.8 4.4 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component LMF1 PF06762.14 NODE_48171_length_394_cov_2.295265_g40300_i0forward_frame_3 - 1.2 8.2 7.7 1.3 8.0 7.7 1.0 1 0 0 1 1 1 0 Lipase maturation factor DRE2_N PF16803.5 NODE_48171_length_394_cov_2.295265_g40300_i0forward_frame_2 - 0.022 15.0 0.0 0.051 13.8 0.0 1.5 2 0 0 2 2 2 0 Fe-S cluster assembly protein DRE2 N-terminus VD10_N PF08476.10 NODE_48170_length_394_cov_2.389972_g40299_i0reverse_frame_2 - 0.071 12.8 0.1 0.14 11.9 0.1 1.4 1 0 0 1 1 1 0 Viral D10 N-terminal ATG22 PF11700.8 NODE_48169_length_394_cov_2.420613_g40298_i0reverse_frame_2 - 0.099 11.3 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like Glyco_hydro_65N PF03636.15 NODE_48169_length_394_cov_2.420613_g40298_i0forward_frame_2 - 4.5e-36 124.6 0.1 5.2e-36 124.4 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 65, N-terminal domain Vps55 PF04133.14 NODE_48162_length_394_cov_3.364903_g40291_i0forward_frame_3 - 0.007 16.3 0.4 0.01 15.8 0.4 1.3 1 0 0 1 1 1 1 Vacuolar protein sorting 55 Lamprin PF06403.11 NODE_48159_length_394_cov_4.415042_g40288_i0forward_frame_3 - 0.24 11.4 1.0 0.46 10.4 1.0 1.4 1 0 0 1 1 1 0 Lamprin DUF4089 PF13318.6 NODE_48154_length_394_cov_53.378830_g40283_i0forward_frame_2 - 0.021 15.3 0.2 0.037 14.5 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4089) RabGAP-TBC PF00566.18 NODE_48150_length_394_cov_69.646240_g40279_i0reverse_frame_3 - 0.0022 17.7 0.6 0.0052 16.5 0.1 1.8 2 0 0 2 2 2 1 Rab-GTPase-TBC domain CDC37_C PF08564.10 NODE_48150_length_394_cov_69.646240_g40279_i0reverse_frame_3 - 0.083 13.0 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Cdc37 C terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks198.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks198.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks198.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks198.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HD_4 PF13328.6 NODE_48145_length_394_cov_78.855153_g40274_i0reverse_frame_2 - 0.091 12.5 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 HD domain DUF2567 PF10821.8 NODE_48143_length_394_cov_87.785515_g40272_i0reverse_frame_3 - 0.14 12.2 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2567) Wzy_C PF04932.15 NODE_48135_length_394_cov_158.454039_g40264_i0forward_frame_3 - 1.5 8.5 9.2 1.9 8.1 9.2 1.2 1 0 0 1 1 1 0 O-Antigen ligase PsbK PF02533.15 NODE_48128_length_394_cov_592.158774_g40257_i0forward_frame_2 - 2.4e-20 72.4 6.4 4.6e-20 71.5 6.4 1.4 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component RskA PF10099.9 NODE_48128_length_394_cov_592.158774_g40257_i0forward_frame_2 - 0.78 10.0 6.6 1 9.6 6.6 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF4148 PF13663.6 NODE_48128_length_394_cov_592.158774_g40257_i0forward_frame_2 - 2.2 8.5 6.4 4.7 7.5 6.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) HMG_box PF00505.19 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 5.5e-14 52.3 2.9 7.5e-14 51.9 2.9 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 1.4e-10 41.6 4.4 2.1e-10 41.0 4.4 1.3 1 0 0 1 1 1 1 HMG-box domain Protamine_like PF06382.11 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 0.059 13.5 2.8 0.094 12.9 2.7 1.4 1 1 0 1 1 1 0 Protamine and protamine like Metal_resist PF13801.6 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 0.22 11.7 3.2 0.35 11.1 3.1 1.5 1 1 0 1 1 1 0 Heavy-metal resistance Ribosomal_L6e_N PF03868.15 NODE_48125_length_394_cov_1034.487465_g40254_i0reverse_frame_2 - 1.2 9.5 5.8 0.45 10.8 1.1 2.5 2 1 1 3 3 3 0 Ribosomal protein L6, N-terminal domain K_channel_TID PF07941.11 NODE_48112_length_395_cov_2.188889_g40241_i0reverse_frame_3 - 1.2 9.6 17.8 0.12 12.9 12.1 2.1 2 0 0 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain FH2 PF02181.23 NODE_48111_length_395_cov_2.358333_g40240_i0reverse_frame_2 - 6.1e-25 88.1 1.5 6.8e-25 88.0 1.5 1.0 1 0 0 1 1 1 1 Formin Homology 2 Domain DUF3703 PF12487.8 NODE_48111_length_395_cov_2.358333_g40240_i0reverse_frame_2 - 0.055 13.3 0.0 0.083 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3703) zf-UBP_var PF17807.1 NODE_48111_length_395_cov_2.358333_g40240_i0forward_frame_3 - 0.12 12.1 0.6 0.23 11.2 0.6 1.4 1 0 0 1 1 1 0 Variant UBP zinc finger Cas9_PI2 PF18070.1 NODE_48110_length_395_cov_2.538889_g31065_i2forward_frame_3 - 0.01 16.5 0.3 0.035 14.8 0.3 1.9 1 0 0 1 1 1 0 CRISPR-Cas9 PI domain CSN5_C PF18323.1 NODE_48110_length_395_cov_2.538889_g31065_i2forward_frame_3 - 0.23 12.4 3.8 0.36 11.8 3.8 1.4 1 1 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain Presenilin PF01080.17 NODE_48110_length_395_cov_2.538889_g31065_i2forward_frame_3 - 1.6 7.4 3.7 1.9 7.2 3.7 1.0 1 0 0 1 1 1 0 Presenilin CarbpepA_inh PF02977.15 NODE_48108_length_395_cov_3.008333_g40238_i0forward_frame_3 - 0.033 14.0 0.7 0.033 14.0 0.7 1.9 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor DUF2838 PF10998.8 NODE_48104_length_395_cov_11.452778_g40234_i0reverse_frame_3 - 0.018 15.3 1.2 0.024 14.9 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) STOP PF05217.12 NODE_48103_length_395_cov_20.838889_g40233_i0forward_frame_3 - 0.32 11.3 3.6 0.57 10.5 3.6 1.4 1 0 0 1 1 1 0 STOP protein RCDG1 PF15725.5 NODE_48101_length_395_cov_24.350000_g40231_i0reverse_frame_2 - 0.51 10.8 5.2 0.22 12.0 1.3 2.0 2 0 0 2 2 2 0 Renal cancer differentiation gene 1 protein PPR_1 PF12854.7 NODE_48101_length_395_cov_24.350000_g40231_i0forward_frame_2 - 0.39 10.5 1.0 9.7 6.0 0.2 2.2 2 0 0 2 2 2 0 PPR repeat FluMu_N PF17891.1 NODE_48101_length_395_cov_24.350000_g40231_i0forward_frame_2 - 0.49 10.2 1.6 1.7 8.5 0.0 2.4 3 0 0 3 3 3 0 Mu-like prophage FluMu N-terminal domain DAO PF01266.24 NODE_48091_length_395_cov_69.194444_g40221_i0forward_frame_2 - 4.3e-05 23.3 0.0 4.7e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Ribos_L4_asso_C PF14374.6 NODE_48088_length_395_cov_71.183333_g40218_i0forward_frame_2 - 0.029 14.4 2.8 0.078 13.1 0.3 2.4 2 0 0 2 2 2 0 60S ribosomal protein L4 C-terminal domain UreE_N PF02814.15 NODE_48085_length_395_cov_78.652778_g40215_i0forward_frame_3 - 0.11 12.1 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain HemN_C PF06969.16 NODE_48085_length_395_cov_78.652778_g40215_i0forward_frame_2 - 0.04 14.0 0.6 0.085 12.9 0.1 1.8 2 0 0 2 2 2 0 HemN C-terminal domain tRNA_lig_kinase PF08303.11 NODE_48082_length_395_cov_84.480556_g40212_i0reverse_frame_3 - 0.12 12.4 3.9 1 9.5 0.6 2.1 1 1 1 2 2 2 0 tRNA ligase kinase domain O-antigen_lig PF13425.6 NODE_48082_length_395_cov_84.480556_g40212_i0reverse_frame_3 - 3.2 6.5 5.5 3.4 6.3 5.5 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Tho2 PF11262.8 NODE_48082_length_395_cov_84.480556_g40212_i0reverse_frame_3 - 4.8 6.3 9.4 6.2 5.9 9.4 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Vfa1 PF08432.10 NODE_48082_length_395_cov_84.480556_g40212_i0reverse_frame_3 - 8.4 6.7 11.2 10 6.4 11.2 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 RecR PF02132.15 NODE_48082_length_395_cov_84.480556_g40212_i0forward_frame_2 - 0.42 10.2 2.5 0.91 9.1 0.6 2.2 2 0 0 2 2 2 0 RecR protein zf-C6H2 PF15801.5 NODE_48079_length_395_cov_95.708333_g40209_i0reverse_frame_2 - 0.0061 16.8 2.6 0.012 15.9 2.6 1.4 1 0 0 1 1 1 1 zf-MYND-like zinc finger, mRNA-binding DUF3408 PF11888.8 NODE_48074_length_395_cov_112.977778_g40204_i0reverse_frame_3 - 0.091 12.9 5.8 0.12 12.5 5.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) DUF2193 PF09959.9 NODE_48073_length_395_cov_115.980556_g40203_i0forward_frame_2 - 0.088 11.3 1.1 0.11 10.9 1.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2193) YpmT PF17431.2 NODE_48068_length_395_cov_197.572222_g40199_i0reverse_frame_3 - 0.079 13.0 0.7 0.14 12.2 0.7 1.4 1 0 0 1 1 1 0 Uncharacterized YmpT-like Kisspeptin PF15152.6 NODE_48063_length_395_cov_257.952778_g40194_i0forward_frame_2 - 4.2 8.2 8.4 0.61 10.9 2.5 2.4 1 1 2 3 3 3 0 Kisspeptin DUF5540 PF17694.1 NODE_48057_length_395_cov_9807.986111_g40192_i0reverse_frame_2 - 0.29 11.7 6.3 8.2 7.0 1.4 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5540) Ldl_recept_a PF00057.18 NODE_48057_length_395_cov_9807.986111_g40192_i0forward_frame_2 - 0.037 14.3 1.6 2.7 8.3 0.1 2.2 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A SecG PF03840.14 NODE_48056_length_395_cov_15143.102778_g40191_i0reverse_frame_3 - 0.038 14.1 1.1 0.068 13.3 1.1 1.4 1 0 0 1 1 1 0 Preprotein translocase SecG subunit zf-met PF12874.7 NODE_48056_length_395_cov_15143.102778_g40191_i0reverse_frame_2 - 2.5 8.6 5.2 12 6.4 0.2 2.7 3 0 0 3 3 3 0 Zinc-finger of C2H2 type Spc7 PF08317.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.7e-08 32.6 11.7 4.4e-08 32.4 11.7 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Atg14 PF10186.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.7e-06 25.4 8.4 8.1e-06 25.1 8.4 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 ATG16 PF08614.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.2e-05 25.7 8.4 1.5e-05 25.3 8.4 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) HAP1_N PF04849.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.7e-05 24.2 12.1 2.2e-05 23.8 10.5 1.7 1 1 0 1 1 1 1 HAP1 N-terminal conserved region AAA_13 PF13166.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.7e-05 23.0 9.7 3.4e-05 22.7 9.7 1.1 1 0 0 1 1 1 1 AAA domain Fez1 PF06818.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6e-05 23.6 7.1 7.8e-05 23.2 7.1 1.1 1 0 0 1 1 1 1 Fez1 SlyX PF04102.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 7.7e-05 23.2 16.4 0.0086 16.7 1.2 3.1 1 1 2 3 3 3 2 SlyX TMF_DNA_bd PF12329.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00012 22.0 34.6 0.0023 17.9 13.8 2.8 1 1 2 3 3 3 2 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00013 21.6 20.3 0.00021 21.0 5.8 3.1 1 1 2 3 3 3 1 Septum formation initiator PKcGMP_CC PF16808.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00036 20.3 24.0 0.0004 20.2 2.8 4.0 4 1 0 4 4 3 1 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF641 PF04859.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00037 20.8 12.6 0.029 14.7 6.5 2.2 1 1 1 2 2 2 2 Plant protein of unknown function (DUF641) Prominin PF05478.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0004 18.5 7.7 0.0013 16.8 7.8 1.6 1 1 0 1 1 1 1 Prominin TMF_TATA_bd PF12325.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0004 20.6 27.8 0.0031 17.7 9.1 2.0 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding Tropomyosin_1 PF12718.7 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0005 20.2 10.5 0.00079 19.6 10.5 1.4 1 0 0 1 1 1 1 Tropomyosin like UPF0242 PF06785.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00077 19.6 18.1 0.049 13.7 7.6 2.1 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0242) N-terminus DUF3829 PF12889.7 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00081 19.0 6.6 0.0011 18.5 6.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3829) ZapB PF06005.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.00092 19.6 13.9 0.00092 19.6 13.9 2.2 1 1 1 2 2 2 1 Cell division protein ZapB DUF5482 PF17579.2 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.001 18.9 1.1 0.0013 18.6 0.5 1.4 1 1 0 1 1 1 1 Family of unknown function (DUF5482) HOOK PF05622.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0011 17.2 9.3 0.0014 16.9 9.3 1.1 1 0 0 1 1 1 1 HOOK protein GAS PF13851.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0011 18.3 7.6 0.0011 18.3 7.6 2.0 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding HMMR_N PF15905.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0013 18.3 14.5 0.0016 18.0 14.5 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal EzrA PF06160.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0014 16.9 11.0 0.0017 16.6 11.0 1.1 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA BRE1 PF08647.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0015 18.6 14.1 0.0016 18.4 11.7 2.0 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase SHE3 PF17078.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0018 18.1 6.0 0.0021 17.8 6.0 1.2 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Fib_alpha PF08702.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0019 18.4 14.4 0.03 14.5 6.6 2.2 1 1 1 2 2 2 1 Fibrinogen alpha/beta chain family Spectrin PF00435.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0022 18.5 10.8 0.0028 18.1 8.8 1.9 1 1 1 2 2 2 1 Spectrin repeat TPR_MLP1_2 PF07926.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0022 18.0 13.3 0.0041 17.2 13.3 1.4 1 1 0 1 1 1 1 TPR/MLP1/MLP2-like protein DUF812 PF05667.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0023 16.9 9.8 0.0028 16.6 9.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Taxilin PF09728.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0024 17.1 7.1 0.003 16.8 7.1 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein TMPIT PF07851.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0024 17.2 6.2 0.0028 17.0 6.2 1.1 1 0 0 1 1 1 1 TMPIT-like protein TolA_bind_tri PF16331.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0026 17.8 15.2 0.0092 16.0 7.2 3.0 1 1 2 3 3 3 1 TolA binding protein trimerisation GrpE PF01025.19 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0029 17.3 12.1 0.011 15.4 12.1 1.9 1 1 0 1 1 1 1 GrpE ADIP PF11559.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0031 17.6 9.9 0.0031 17.6 9.9 1.6 1 1 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF724 PF05266.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0033 17.3 7.6 0.0038 17.1 7.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF724) CENP-F_leu_zip PF10473.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0034 17.4 15.5 0.0098 15.9 15.5 1.6 1 1 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ALIX_LYPXL_bnd PF13949.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0036 16.6 4.9 0.0044 16.3 4.9 1.1 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV LRRFIP PF09738.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0038 16.8 8.1 0.0044 16.6 8.1 1.2 1 0 0 1 1 1 1 LRRFIP family APC_N_CC PF16689.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0052 16.8 5.1 0.14 12.2 0.8 3.0 2 1 1 3 3 3 1 Coiled-coil N-terminus of APC, dimerisation domain Laminin_II PF06009.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0061 16.6 12.1 0.021 14.9 9.9 2.0 1 1 1 2 2 2 1 Laminin Domain II BORCS7 PF16088.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0065 16.7 3.5 0.0087 16.3 2.3 1.8 1 1 1 2 2 1 1 BLOC-1-related complex sub-unit 7 DUF4200 PF13863.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0067 16.8 21.5 0.017 15.5 6.2 3.0 1 1 2 3 3 3 2 Domain of unknown function (DUF4200) DUF3584 PF12128.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0069 14.0 7.5 0.0078 13.8 7.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF3552 PF12072.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0073 15.8 10.9 0.01 15.3 10.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) DUF745 PF05335.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0083 15.9 4.4 0.012 15.4 4.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF745) Cnn_1N PF07989.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.009 16.1 14.6 0.009 16.1 14.6 2.0 1 1 2 3 3 2 1 Centrosomin N-terminal motif 1 XLF PF09302.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0093 16.2 8.6 0.7 10.0 0.4 2.1 1 1 1 2 2 2 2 XLF-Cernunnos, XRcc4-like factor, NHEJ component PI3K_P85_iSH2 PF16454.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0097 15.5 11.3 0.016 14.8 11.3 1.4 1 1 0 1 1 1 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain HemX PF04375.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.0098 15.2 7.2 0.013 14.8 7.2 1.2 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase DUF4239 PF14023.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.01 15.6 2.3 0.013 15.3 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) Baculo_PEP_C PF04513.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.011 15.8 10.1 0.094 12.8 10.1 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Rab5-bind PF09311.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.011 15.1 11.6 0.013 14.9 11.6 1.1 1 0 0 1 1 1 0 Rabaptin-like protein DUF1664 PF07889.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.011 15.7 10.4 0.062 13.3 9.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF16 PF01519.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.012 16.1 13.2 0.095 13.2 13.2 2.1 1 1 0 1 1 1 0 Protein of unknown function DUF16 Helo_like_N PF17111.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.015 14.7 2.1 0.021 14.2 1.5 1.5 1 1 0 1 1 1 0 Fungal N-terminal domain of STAND proteins APG6_N PF17675.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.015 15.8 16.1 0.028 14.9 16.1 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region Tho2 PF11262.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.015 14.5 4.6 0.024 13.8 4.6 1.4 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Csm1_N PF18504.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.015 15.6 14.1 0.032 14.6 6.6 2.9 1 1 3 4 4 4 0 Csm1 N-terminal domain YkyA PF10368.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.018 14.7 15.1 0.027 14.1 14.9 1.4 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein DUF3450 PF11932.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.018 14.4 14.6 0.068 12.5 14.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FlaC_arch PF05377.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.018 15.4 14.4 0.11 13.0 9.0 3.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Alpha-2-MRAP_C PF06401.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.018 15.0 3.4 0.024 14.6 3.4 1.2 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain TACC_C PF05010.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.02 14.7 6.1 0.02 14.7 6.1 2.1 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal TBCC_N PF16752.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.02 15.3 7.6 0.059 13.8 7.6 1.7 1 1 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain DUF4201 PF13870.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.022 14.5 12.6 0.029 14.1 12.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) ERM PF00769.19 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.024 14.5 12.3 0.031 14.1 12.3 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family MCC-bdg_PDZ PF10506.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.027 14.5 1.0 0.027 14.5 1.0 2.1 2 1 0 2 2 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome NPV_P10 PF05531.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.027 14.9 11.7 15 6.1 11.7 2.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Filament PF00038.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.028 14.0 12.4 0.047 13.3 12.3 1.4 1 1 0 1 1 1 0 Intermediate filament protein MAD PF05557.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.028 12.8 11.1 0.034 12.5 11.1 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein FapA PF03961.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.031 12.9 10.3 0.037 12.6 10.3 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A CCCAP PF15964.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.032 12.6 7.4 0.035 12.4 7.4 1.1 1 0 0 1 1 1 0 Centrosomal colon cancer autoantigen protein family DUF4407 PF14362.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.032 13.6 8.7 0.079 12.3 8.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TraF_2 PF13729.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.035 13.5 1.3 0.042 13.2 1.3 1.1 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein CLZ PF16526.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.036 14.4 9.4 0.044 14.2 8.0 1.9 1 1 1 2 2 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels MPS2 PF17060.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.037 13.3 8.4 0.043 13.1 8.4 1.1 1 0 0 1 1 1 0 Monopolar spindle protein 2 Phage_GP20 PF06810.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.038 13.8 13.8 0.15 11.9 13.8 1.9 1 1 0 1 1 1 0 Phage minor structural protein GP20 Exonuc_VII_L PF02601.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.038 13.5 8.5 0.051 13.1 7.5 1.5 1 1 1 2 2 1 0 Exonuclease VII, large subunit Gp58 PF07902.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.04 12.2 2.5 0.046 12.0 2.5 1.1 1 0 0 1 1 1 0 gp58-like protein Tektin PF03148.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.043 12.6 11.0 0.07 11.9 11.0 1.4 1 0 0 1 1 1 0 Tektin family LXG PF04740.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.044 13.5 7.7 0.065 12.9 7.7 1.3 1 0 0 1 1 1 0 LXG domain of WXG superfamily DUF4527 PF15030.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.046 13.1 2.2 0.06 12.8 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) HIP1_clath_bdg PF16515.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.047 14.3 12.6 0.4 11.3 12.6 2.3 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4795 PF16043.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.048 13.3 12.4 3 7.4 12.4 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Phage_GPO PF05929.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.049 13.2 3.4 0.067 12.8 3.4 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Sec5 PF15469.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.054 13.3 4.3 0.081 12.7 4.3 1.4 1 0 0 1 1 1 0 Exocyst complex component Sec5 VGPC1_C PF16799.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.058 13.4 7.8 0.076 13.0 3.6 2.7 1 1 1 2 2 2 0 C-terminal membrane-localisation domain of ion-channel, VCN1 Baculo_F PF12259.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.058 11.9 4.6 0.069 11.7 4.6 1.1 1 0 0 1 1 1 0 Baculovirus F protein AKNA PF12443.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.06 14.0 4.3 0.062 13.9 1.8 2.2 1 1 1 2 2 1 0 AT-hook-containing transcription factor CC2-LZ PF16516.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.061 13.7 13.5 0.28 11.6 5.4 2.6 1 1 2 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator YPEB PF14620.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.061 12.7 3.4 0.068 12.5 3.4 1.1 1 0 0 1 1 1 0 YpeB sporulation DUF4763 PF15960.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.062 12.6 8.9 0.16 11.2 8.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4763) HrpB7 PF09486.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.064 13.6 8.4 0.1 13.0 8.2 1.5 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) End3 PF12761.7 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.066 13.4 5.7 0.11 12.6 5.7 1.4 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 Yuri_gagarin PF15934.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.068 13.0 7.9 2.6 7.8 3.8 2.1 1 1 1 2 2 2 0 Yuri gagarin Nup54 PF13874.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.07 13.2 6.0 0.025 14.7 3.1 1.6 1 1 1 2 2 1 0 Nucleoporin complex subunit 54 DUF4495 PF14906.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.073 12.1 0.0 0.083 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4495) Wtap PF17098.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.073 13.0 9.0 0.41 10.6 1.0 2.3 1 1 1 2 2 2 0 WTAP/Mum2p family Hormone_4 PF00220.17 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.076 13.0 0.8 0.17 11.9 0.8 1.5 1 0 0 1 1 1 0 Neurohypophysial hormones, N-terminal Domain Golgin_A5 PF09787.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.081 12.4 13.8 0.17 11.3 13.8 1.5 1 1 0 1 1 1 0 Golgin subfamily A member 5 DUF4446 PF14584.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.082 12.9 8.5 0.64 10.0 2.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) HR1 PF02185.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.082 13.0 10.0 0.13 12.4 1.9 2.6 1 1 1 2 2 2 0 Hr1 repeat BicD PF09730.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.087 11.2 11.2 0.096 11.1 11.2 1.0 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D KLRAQ PF10205.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.087 13.1 10.0 1.6 9.0 10.0 2.3 1 1 0 1 1 1 0 Predicted coiled-coil domain-containing protein COG5 PF10392.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.087 13.0 6.2 0.14 12.4 6.2 1.3 1 0 0 1 1 1 0 Golgi transport complex subunit 5 Corona_S2 PF01601.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.089 11.3 2.4 0.11 11.0 2.4 1.1 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein DUF3138 PF11336.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.091 11.4 0.0 0.096 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Lebercilin PF15619.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.092 12.4 14.0 0.42 10.2 14.0 2.2 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease HAUS6_N PF14661.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.1 12.1 4.3 0.14 11.8 4.3 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus BBP1_C PF15272.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.11 12.3 7.9 0.15 11.8 7.9 1.3 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal DUF948 PF06103.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.11 12.8 6.1 0.67 10.2 5.7 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Uso1_p115_C PF04871.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.11 12.8 9.4 0.072 13.5 7.6 1.5 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Prefoldin_2 PF01920.20 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.11 12.4 19.7 0.071 13.1 5.6 3.2 1 1 2 3 3 3 0 Prefoldin subunit Spc24 PF08286.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.7 10.6 0.55 10.5 10.6 2.1 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF2730 PF10805.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.5 8.0 0.17 12.0 4.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) MscS_porin PF12795.7 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 11.9 16.1 0.55 9.7 16.0 1.8 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain Phage_Mu_Gam PF07352.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.3 14.9 1 9.3 5.2 2.1 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein MCPsignal PF00015.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.2 7.5 0.17 11.7 7.5 1.3 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain LPP PF04728.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.12 12.8 4.9 0.8 10.1 2.3 2.9 1 1 1 2 2 2 0 Lipoprotein leucine-zipper Mod_r PF07200.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.13 12.4 10.7 0.25 11.5 10.7 1.5 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein DUF2203 PF09969.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.14 12.9 8.8 0.77 10.5 8.7 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) LMP PF04778.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.14 12.1 8.9 0.098 12.6 7.4 1.5 1 1 0 1 1 1 0 LMP repeated region Cep57_MT_bd PF06657.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.14 12.6 10.0 0.3 11.5 8.1 2.1 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 APG17 PF04108.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.15 11.1 7.3 0.25 10.4 7.3 1.5 1 1 0 1 1 1 0 Autophagy protein Apg17 CHDCT2 PF08074.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.17 12.1 3.1 0.22 11.7 3.1 1.1 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain Spc29 PF17082.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.17 11.7 10.6 0.69 9.7 10.2 1.9 1 1 0 1 1 1 0 Spindle Pole Component 29 BST2 PF16716.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.18 12.4 13.5 0.58 10.8 7.6 2.7 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 COG2 PF06148.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.18 11.9 7.3 0.8 9.8 7.3 1.9 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 HCMV_UL139 PF12507.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.19 12.1 4.3 0.84 10.0 4.2 2.2 1 1 0 1 1 1 0 Human Cytomegalovirus UL139 protein Cast PF10174.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.2 9.9 12.7 0.5 8.5 12.6 1.5 1 1 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone YabA PF06156.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.2 12.3 11.0 7.6 7.2 11.0 2.6 1 1 0 1 1 1 0 Initiation control protein YabA FliJ PF02050.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.21 11.8 12.7 0.43 10.8 12.7 1.5 1 1 0 1 1 1 0 Flagellar FliJ protein PspA_IM30 PF04012.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.21 11.2 13.9 0.12 11.9 9.6 2.0 1 1 1 2 2 2 0 PspA/IM30 family Med9 PF07544.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.21 11.7 17.4 0.6 10.2 9.6 2.9 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF2748 PF10871.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.22 10.1 5.5 0.19 10.3 4.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2748) Seryl_tRNA_N PF02403.22 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.22 11.8 15.5 0.47 10.7 13.7 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain zf-C4H2 PF10146.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.22 11.8 10.0 0.25 11.6 10.0 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF677 PF05055.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.24 10.3 6.3 0.31 9.9 6.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF677) Vps51 PF08700.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.24 11.5 8.0 1.6 8.9 4.8 3.2 1 1 1 2 2 1 0 Vps51/Vps67 Herpes_UL6 PF01763.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.26 9.8 4.2 0.29 9.6 4.2 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like HAUS-augmin3 PF14932.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.27 10.8 10.8 0.93 9.0 10.8 1.7 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 Prefoldin PF02996.17 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.29 11.1 16.0 0.32 10.9 3.3 3.1 1 1 2 3 3 3 0 Prefoldin subunit FAM76 PF16046.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.29 10.4 12.2 0.43 9.9 3.5 1.8 1 1 1 2 2 2 0 FAM76 protein KASH_CCD PF14662.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.3 10.9 15.0 0.89 9.4 15.0 1.6 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH V_ATPase_I PF01496.19 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.3 9.0 5.8 0.32 8.9 5.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CEP209_CC5 PF16574.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.3 11.3 15.2 0.35 11.1 8.9 2.2 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 CENP-H PF05837.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.31 11.5 13.0 0.5 10.8 13.0 1.4 1 1 0 1 1 1 0 Centromere protein H (CENP-H) Herpes_U30 PF04523.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.32 8.8 4.2 0.43 8.4 4.2 1.1 1 0 0 1 1 1 0 Herpes virus tegument protein U30 Cob_adeno_trans PF01923.18 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.33 11.1 4.6 0.79 9.8 4.4 1.7 1 1 0 1 1 1 0 Cobalamin adenosyltransferase OmpH PF03938.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.33 11.3 15.2 0.99 9.7 15.2 1.8 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) CENP-Q PF13094.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.38 10.9 11.8 1.2 9.3 1.2 2.3 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Sec8_exocyst PF04048.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.38 10.6 7.7 1.4 8.8 7.7 1.8 1 1 0 1 1 1 0 Sec8 exocyst complex component specific domain DUF1759 PF03564.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.39 10.6 4.6 0.73 9.8 4.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1759) RPW8 PF05659.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.39 10.4 10.1 3.2 7.4 5.4 2.4 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 VPS38 PF17649.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.42 9.4 5.8 0.56 9.0 5.8 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting 38 FliD_C PF07195.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.43 10.0 6.5 0.82 9.0 6.5 1.4 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus bZIP_1 PF00170.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.44 10.7 11.4 1.2 9.2 2.1 2.9 1 1 2 3 3 3 0 bZIP transcription factor GvpL_GvpF PF06386.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.45 10.4 3.7 0.51 10.2 3.7 1.2 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF LOH1CR12 PF10158.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.51 10.4 7.8 0.84 9.7 2.2 2.2 1 1 1 2 2 2 0 Tumour suppressor protein IFT57 PF10498.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.55 9.1 13.9 0.29 10.1 9.4 1.7 1 1 0 1 1 1 0 Intra-flagellar transport protein 57 Bacillus_HBL PF05791.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.56 10.0 10.9 4.8 7.0 10.9 2.1 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) Fmp27_WPPW PF10359.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.56 9.0 6.2 0.64 8.8 6.2 1.2 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Bcr-Abl_Oligo PF09036.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.59 10.2 4.1 0.7 9.9 1.3 2.2 1 1 1 2 2 1 0 Bcr-Abl oncoprotein oligomerisation domain DUF4988 PF16378.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.61 9.7 10.8 0.22 11.1 2.6 2.4 1 1 1 2 2 2 0 Domain of unknown function PHM7_cyt PF14703.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.62 10.3 8.5 1.2 9.3 4.5 2.2 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Occludin_ELL PF07303.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.65 10.8 6.3 0.97 10.2 1.9 2.4 1 1 1 2 2 2 0 Occludin homology domain DASH_Spc34 PF08657.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.69 9.7 12.2 3.2 7.5 12.2 1.8 1 1 0 1 1 1 0 DASH complex subunit Spc34 Ax_dynein_light PF10211.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.71 9.8 12.7 0.98 9.3 11.7 1.7 1 1 1 2 2 2 0 Axonemal dynein light chain FmiP_Thoc5 PF09766.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.73 9.1 10.0 1.9 7.7 10.0 1.5 1 1 0 1 1 1 0 Fms-interacting protein/Thoc5 DHR10 PF18595.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.78 9.8 17.3 4.9 7.3 17.3 1.9 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain DUF848 PF05852.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.82 9.8 12.8 0.52 10.4 3.1 2.0 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) BLOC1_2 PF10046.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.82 10.0 14.5 6.4 7.2 12.1 2.8 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HBM PF16591.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.88 8.9 8.8 0.94 8.9 5.8 1.8 1 1 1 2 2 2 0 Helical bimodular sensor domain SKA1 PF07160.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.95 9.3 11.9 3.3 7.5 8.7 1.9 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 KxDL PF10241.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.96 9.8 9.0 2.6 8.4 0.9 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein DUF5082 PF16888.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.97 9.7 16.6 0.24 11.7 7.5 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF1192 PF06698.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 0.99 9.5 25.1 7.1 6.8 4.2 4.5 1 1 3 4 4 4 0 Protein of unknown function (DUF1192) Lge1 PF11488.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1 9.6 12.3 5.6 7.2 6.1 2.3 1 1 1 2 2 2 0 Transcriptional regulatory protein LGE1 ACCA PF03255.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1 9.2 10.6 6.6 6.6 10.6 2.0 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FPP PF05911.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1 7.4 14.3 2.9 6.0 14.2 1.6 1 1 0 1 1 1 0 Filament-like plant protein, long coiled-coil Mitofilin PF09731.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.1 8.0 11.4 1.3 7.8 11.4 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein ECM11 PF15463.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.1 9.8 9.7 5.7 7.5 1.8 2.1 1 1 1 2 2 2 0 Extracellular mutant protein 11 Cytochrom_B562 PF07361.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.1 9.9 7.1 1.6 9.5 4.3 1.6 1 1 1 2 2 2 0 Cytochrome b562 CP12 PF02672.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.2 10.0 6.3 8.6 7.2 5.3 2.4 1 1 1 2 2 2 0 CP12 domain FemAB PF02388.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.2 8.0 6.1 1.3 7.8 5.6 1.3 1 1 0 1 1 1 0 FemAB family THOC7 PF05615.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.2 9.4 13.7 3.1 8.1 13.7 1.7 1 1 0 1 1 1 0 Tho complex subunit 7 DASH_Dam1 PF08653.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.3 8.9 3.3 11 6.0 0.6 2.7 1 1 1 2 2 2 0 DASH complex subunit Dam1 Synaptobrevin PF00957.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.3 8.9 12.5 0.57 10.0 2.3 2.5 1 1 1 2 2 2 0 Synaptobrevin Spc42p PF11544.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.3 9.0 13.6 3.6 7.7 1.6 3.3 1 1 2 3 3 3 0 Spindle pole body component Spc42p LMBR1 PF04791.16 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.3 7.8 2.5 1.4 7.7 2.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Phage_HK97_TLTM PF06120.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.4 8.0 11.5 0.39 9.8 7.3 1.8 1 1 1 2 2 2 0 Tail length tape measure protein MRPL52 PF18699.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.4 9.1 15.5 1.3 9.3 3.6 3.0 1 1 2 3 3 3 0 Mitoribosomal protein mL52 5_nucleotid PF05761.14 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.5 7.7 7.6 1.8 7.3 7.6 1.1 1 0 0 1 1 1 0 5' nucleotidase family Rho_Binding PF08912.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.5 9.7 12.8 1.6e+02 3.2 12.7 2.9 1 1 0 1 1 1 0 Rho Binding DUF4337 PF14235.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.5 8.9 8.1 1.1 9.3 5.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4337) Fzo_mitofusin PF04799.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.6 8.3 8.8 13 5.3 8.8 2.1 1 1 0 1 1 1 0 fzo-like conserved region DUF4298 PF14131.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.7 8.7 7.8 6.7 6.8 0.6 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4298) GIT_CC PF16559.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.9 8.4 6.8 11 5.9 1.1 2.5 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor RRP36 PF06102.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.9 8.4 9.2 3.1 7.7 8.2 1.8 1 1 1 2 2 2 0 rRNA biogenesis protein RRP36 DUF2968 PF11180.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.9 8.1 10.8 5.1 6.7 10.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2968) Swi5 PF07061.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 1.9 8.6 13.6 1.7 8.8 5.2 3.0 1 1 1 2 2 2 0 Swi5 DUF1910 PF08928.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2 8.5 7.7 14 5.7 5.4 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF1910) DUF4315 PF14193.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2 8.4 15.2 0.14 12.2 9.0 2.1 1 1 0 2 2 1 0 Domain of unknown function (DUF4315) ABC_tran_CTD PF16326.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.4 8.5 21.8 3.1e+02 1.7 21.8 3.1 1 1 0 1 1 1 0 ABC transporter C-terminal domain V-SNARE PF05008.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.5 8.5 13.5 19 5.7 13.6 2.2 1 1 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus DUF4349 PF14257.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.5 7.5 13.4 2.1 7.7 6.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4349) Mt_ATP-synt_D PF05873.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.6 7.9 7.9 9.6 6.0 7.3 2.2 1 1 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) Troponin PF00992.20 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.6 8.3 14.5 1.6 9.0 8.4 2.1 1 1 1 2 2 2 0 Troponin XhlA PF10779.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.9 8.2 16.3 0.41 10.9 8.5 2.8 1 1 2 3 3 2 0 Haemolysin XhlA Macoilin PF09726.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 2.9 6.3 8.0 3.4 6.1 8.0 1.1 1 0 0 1 1 1 0 Macoilin family Ribosomal_S6 PF01250.17 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.1 8.2 7.2 4.5 7.6 0.6 2.3 1 1 1 2 2 2 0 Ribosomal protein S6 MIP-T3_C PF17749.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.3 7.7 17.8 4.2 7.3 4.0 2.5 1 1 1 2 2 2 0 Microtubule-binding protein MIP-T3 C-terminal region KIP1 PF07765.12 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.6 7.8 7.4 1.6 8.9 3.7 2.1 1 1 1 2 2 2 0 KIP1-like protein LUC7 PF03194.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.6 7.2 9.2 2.7 7.6 7.7 1.4 1 1 0 1 1 1 0 LUC7 N_terminus Histone_HNS PF00816.21 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 3.6 8.5 10.2 1.4 9.8 6.7 2.0 1 1 1 2 2 2 0 H-NS histone family LidA_Long_CC PF18641.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.2 7.4 13.0 8.6 6.4 8.7 2.2 1 1 2 3 3 3 0 LidA long coiled-coil domain USP8_interact PF08941.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.3 7.1 10.6 3.5 7.4 1.2 2.1 1 1 1 2 2 2 0 USP8 interacting Cluap1 PF10234.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.4 6.6 12.4 7.1 5.9 12.1 1.5 1 1 1 2 2 2 0 Clusterin-associated protein-1 T4SS PF07996.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.6 7.6 13.9 1.2 9.5 2.2 2.7 1 1 1 2 2 2 0 Type IV secretion system proteins GTP-bdg_M PF16360.5 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.6 7.9 11.2 8.3 7.1 4.6 3.0 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region Syntaxin-6_N PF09177.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 4.8 7.8 10.5 25 5.5 10.5 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Allexi_40kDa PF05549.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 5 6.6 5.5 8.3 5.8 5.5 1.4 1 1 0 1 1 1 0 Allexivirus 40kDa protein DUF4404 PF14357.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 5.1 7.8 11.1 18 6.1 1.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) DUF919 PF06034.11 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 5.5 6.9 18.8 2.2 8.2 9.1 3.2 1 1 3 4 4 3 0 Nucleopolyhedrovirus protein of unknown function (DUF919) DUF4061 PF13270.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 5.5 7.4 9.5 3.9 7.8 4.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4061) DUF4140 PF13600.6 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.1 7.4 13.3 1.4e+02 3.0 13.3 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) PhoU PF01895.19 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.1 7.4 13.4 3.1 8.3 2.0 2.9 1 1 2 3 3 2 0 PhoU domain HalX PF08663.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.2 7.2 10.1 8.1 6.8 5.6 2.6 2 1 1 3 3 2 0 HalX domain TPD52 PF04201.15 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.7 6.3 9.0 7 6.2 7.8 1.5 1 1 1 2 2 1 0 Tumour protein D52 family PCRF PF03462.18 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.7 6.5 9.9 9.4 6.1 9.6 1.3 1 1 0 1 1 1 0 PCRF domain DASH_Dad1 PF08649.10 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 6.9 6.9 7.7 1.9 8.7 0.5 2.7 2 1 0 2 2 2 0 DASH complex subunit Dad1 Bap31_Bap29_C PF18035.1 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 7.1 6.7 14.1 92 3.2 0.0 3.9 2 1 0 2 2 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain Paramyx_P_V_C PF03210.13 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 7.5 6.3 10.4 8.2 6.2 3.4 2.5 1 1 2 3 3 3 0 Paramyxovirus P/V phosphoprotein C-terminal Med21 PF11221.8 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 7.9 6.7 16.6 7 6.9 11.9 2.5 1 1 2 3 3 3 0 Subunit 21 of Mediator complex DUF2443 PF10398.9 NODE_48049_length_396_cov_1.842105_g40184_i0reverse_frame_3 - 9.3 6.4 11.7 4.9 7.3 0.8 3.4 1 1 2 3 3 3 0 Protein of unknown function (DUF2443) Pkinase PF00069.25 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 8.2e-36 123.7 0.0 9.8e-36 123.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 7e-21 74.7 0.0 8.9e-21 74.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 1.3e-06 28.0 0.0 1.6e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 6.3e-06 25.2 0.1 7.5e-06 25.0 0.1 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 1.6e-05 24.4 0.0 2.4e-05 23.8 0.0 1.3 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 0.00061 19.8 0.0 0.00073 19.5 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 0.0038 16.9 0.0 0.0048 16.5 0.0 1.1 1 0 0 1 1 1 1 RIO1 family Choline_kinase PF01633.20 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 0.027 14.1 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase DUF1679 PF07914.11 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 0.052 12.4 0.0 0.061 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) EcKinase PF02958.20 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 0.07 12.4 0.0 0.094 12.0 0.0 1.2 1 0 0 1 1 1 0 Ecdysteroid kinase FTA2 PF13095.6 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_3 - 0.087 12.4 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUF4209 PF13910.6 NODE_48042_length_396_cov_2.166205_g40177_i0reverse_frame_2 - 0.16 12.2 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4209) Glu_cyclase_2 PF05096.12 NODE_48039_length_396_cov_2.310249_g40174_i0forward_frame_2 - 1.5e-17 63.8 0.2 5.1e-17 62.1 0.2 1.7 1 1 0 1 1 1 1 Glutamine cyclotransferase YmzC PF14157.6 NODE_48039_length_396_cov_2.310249_g40174_i0forward_frame_2 - 0.0016 18.4 0.0 0.62 10.2 0.0 2.3 2 0 0 2 2 2 2 YmzC-like protein HTS PF04204.16 NODE_48035_length_396_cov_3.002770_g40170_i0forward_frame_2 - 6.4e-25 87.7 0.2 8.9e-25 87.2 0.2 1.2 1 0 0 1 1 1 1 Homoserine O-succinyltransferase ESPR PF13018.6 NODE_48025_length_396_cov_33.481994_g40160_i0forward_frame_2 - 0.084 12.7 1.1 0.23 11.3 1.1 1.8 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system Pardaxin PF07425.11 NODE_48023_length_396_cov_66.700831_g26903_i1forward_frame_2 - 0.17 11.5 0.2 0.29 10.8 0.2 1.3 1 0 0 1 1 1 0 Pardaxin UPF0730 PF15827.5 NODE_48022_length_396_cov_67.163435_g40158_i0reverse_frame_3 - 0.056 13.2 2.7 0.23 11.2 0.6 2.2 2 0 0 2 2 2 0 UPF0730 unknown protein family DUF2285 PF10074.9 NODE_48020_length_396_cov_77.559557_g40156_i0reverse_frame_2 - 0.0083 16.8 0.1 0.014 16.0 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2285) DUSP PF06337.12 NODE_48012_length_396_cov_97.240997_g40148_i0forward_frame_3 - 0.00071 20.2 0.6 0.00085 19.9 0.6 1.2 1 0 0 1 1 1 1 DUSP domain HMG_box PF00505.19 NODE_48010_length_396_cov_126.282548_g40146_i0reverse_frame_3 - 9.4e-12 45.2 1.9 1.8e-11 44.3 1.9 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_48010_length_396_cov_126.282548_g40146_i0reverse_frame_3 - 1.5e-06 28.7 1.7 1.5e-06 28.7 1.7 1.8 1 1 0 1 1 1 1 HMG-box domain Ccdc124 PF06244.12 NODE_48010_length_396_cov_126.282548_g40146_i0reverse_frame_3 - 0.023 15.2 1.0 0.023 15.2 1.0 2.1 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 124 /Oxs1 CbiQ PF02361.16 NODE_48006_length_396_cov_150.027701_g40142_i0reverse_frame_2 - 3.1 7.3 5.9 2 8.0 4.0 1.6 2 0 0 2 2 2 0 Cobalt transport protein Resistin PF06954.11 NODE_48006_length_396_cov_150.027701_g40142_i0forward_frame_2 - 2.3 8.8 5.7 1.8 9.2 1.7 2.1 2 0 0 2 2 2 0 Resistin IL3 PF02059.15 NODE_47998_length_396_cov_189.476454_g40134_i0reverse_frame_3 - 0.023 14.8 0.1 0.03 14.4 0.1 1.3 1 0 0 1 1 1 0 Interleukin-3 FAD-SLDH PF12318.8 NODE_47993_length_396_cov_237.695291_g40129_i0reverse_frame_2 - 0.084 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase DUF1624 PF07786.12 NODE_47989_length_396_cov_1157.152355_g40125_i0reverse_frame_3 - 0.046 13.3 0.7 0.069 12.7 0.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1624) PSII_Ycf12 PF05969.11 NODE_47989_length_396_cov_1157.152355_g40125_i0reverse_frame_3 - 0.049 13.6 0.1 0.097 12.7 0.1 1.6 1 0 0 1 1 1 0 Photosystem II complex subunit Ycf12 DUF2583 PF10762.9 NODE_47989_length_396_cov_1157.152355_g40125_i0reverse_frame_3 - 0.059 13.8 0.1 12 6.4 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2583) DUF4436 PF14494.6 NODE_47989_length_396_cov_1157.152355_g40125_i0reverse_frame_3 - 0.11 11.8 1.4 0.2 10.9 1.4 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4436) CD45 PF12567.8 ORF99793 - 0.25 11.3 1.1 2.4 8.2 0.4 2.2 2 0 0 2 2 2 0 Leukocyte receptor CD45 Gpi16 PF04113.14 ORF99436 - 0.054 11.9 0.1 0.082 11.3 0.1 1.3 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component Cas_Cas4 PF01930.17 ORF99436 - 0.12 12.5 0.6 0.16 12.1 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF83 BST2 PF16716.5 ORF99436 - 0.24 12.0 3.1 0.41 11.2 3.1 1.4 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Tachystatin_A PF11406.8 ORF98917 - 0.077 13.1 0.4 0.077 13.1 0.4 2.3 3 0 0 3 3 3 0 Antimicrobial peptide tachystatin A ABC_cobalt PF09819.9 ORF98897 - 0.12 12.5 1.6 4.2 7.5 0.4 2.1 1 1 0 2 2 2 0 ABC-type cobalt transport system, permease component Uds1 PF15456.6 ORF98273 - 0.033 14.4 4.2 0.041 14.0 4.2 1.1 1 0 0 1 1 1 0 Up-regulated During Septation DUF2110 PF09883.9 ORF98273 - 0.038 13.6 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2110) V_ATPase_I PF01496.19 ORF98273 - 0.38 8.6 5.9 0.4 8.5 5.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Ependymin PF00811.18 ORF9539 - 0.062 13.6 1.2 0.081 13.2 1.0 1.3 1 1 0 1 1 1 0 Ependymin DUF4141 PF13605.6 ORF94380 - 0.08 12.2 0.3 0.22 10.8 0.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4141) Metallothio_Euk PF12749.7 ORF92775 - 0.69 10.1 10.7 0.075 13.2 5.5 1.9 2 0 0 2 2 2 0 Eukaryotic metallothionein Uds1 PF15456.6 ORF91298 - 0.25 11.5 3.1 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Up-regulated During Septation DUF2070 PF09843.9 ORF90520 - 2.7 6.2 8.5 2.7 6.2 8.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MENTAL PF10457.9 ORF90277 - 0.042 13.7 0.5 0.044 13.6 0.5 1.2 1 0 0 1 1 1 0 Cholesterol-capturing domain BLOC1_2 PF10046.9 ORF89873 - 0.00017 21.8 9.8 0.00017 21.8 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_TATA_bd PF12325.8 ORF89873 - 0.0052 17.0 10.8 0.29 11.4 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding GAS PF13851.6 ORF89873 - 0.015 14.6 13.1 0.014 14.7 12.1 1.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF89873 - 0.017 12.7 6.9 0.02 12.4 6.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Spc7 PF08317.11 ORF89873 - 0.017 14.0 9.4 0.022 13.6 9.4 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Leu_zip PF15294.6 ORF89873 - 0.019 14.5 10.1 0.023 14.2 10.1 1.1 1 0 0 1 1 1 0 Leucine zipper Baculo_PEP_C PF04513.12 ORF89873 - 0.025 14.6 6.6 0.032 14.3 6.6 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Vps53_N PF04100.12 ORF89873 - 0.029 13.3 7.1 0.011 14.7 4.3 1.5 1 1 0 1 1 1 0 Vps53-like, N-terminal DUF1664 PF07889.12 ORF89873 - 0.049 13.7 9.6 0.37 10.8 4.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) ZnuA PF01297.17 ORF89873 - 0.062 12.7 1.5 0.081 12.3 1.5 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic PRKG1_interact PF15898.5 ORF89873 - 0.073 14.0 7.0 0.58 11.1 0.5 2.3 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain CEP63 PF17045.5 ORF89873 - 0.088 12.7 9.6 0.47 10.3 9.5 1.8 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa ATG16 PF08614.11 ORF89873 - 0.1 12.8 8.5 1.2 9.3 1.1 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIC PF04977.15 ORF89873 - 0.11 12.3 9.3 1.6 8.5 1.5 2.5 1 1 1 2 2 2 0 Septum formation initiator Tuberin PF03542.16 ORF89873 - 0.11 11.6 3.2 0.12 11.5 3.2 1.0 1 0 0 1 1 1 0 Tuberin RasGAP_C PF03836.15 ORF89873 - 0.2 11.8 8.6 2.5 8.2 2.8 2.1 1 1 1 2 2 2 0 RasGAP C-terminus TSNAXIP1_N PF15739.5 ORF89873 - 0.21 12.0 7.7 0.14 12.6 0.7 2.3 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus Fib_alpha PF08702.10 ORF89873 - 0.22 11.7 11.2 3.3 7.9 0.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Macoilin PF09726.9 ORF89873 - 0.24 9.9 8.6 0.35 9.4 8.6 1.2 1 0 0 1 1 1 0 Macoilin family Spc24 PF08286.11 ORF89873 - 0.26 11.5 10.8 55 4.1 10.8 2.2 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 TMPIT PF07851.13 ORF89873 - 0.32 10.2 7.2 0.17 11.1 4.8 1.5 1 1 1 2 2 2 0 TMPIT-like protein Tup_N PF08581.10 ORF89873 - 0.35 11.2 10.0 4.7 7.6 1.0 2.2 1 1 1 2 2 2 0 Tup N-terminal BPL_N PF09825.9 ORF89873 - 0.61 9.1 4.8 0.69 8.9 4.8 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal Csm2_III-A PF03750.13 ORF89873 - 0.73 10.7 5.8 0.61 10.9 2.2 2.0 1 1 1 2 2 2 0 Csm2 Type III-A FlaC_arch PF05377.11 ORF89873 - 1 9.8 13.4 3.5 8.1 0.8 3.5 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) UPF0242 PF06785.11 ORF89873 - 1 9.4 10.4 1.3 9.1 10.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5595 PF18077.1 ORF89873 - 1.6 8.9 8.2 1.9 8.6 2.4 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5595) USP8_interact PF08941.10 ORF89873 - 1.8 8.3 8.7 0.29 10.9 0.7 2.0 1 1 1 2 2 2 0 USP8 interacting NPV_P10 PF05531.12 ORF89873 - 3.5 8.2 10.5 4.4 7.8 6.8 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 ORF89873 - 5.7 7.6 10.9 4.4e+02 1.6 10.9 2.2 1 1 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF89873 - 6.3 7.5 7.9 14 6.4 3.1 2.5 1 1 2 3 3 3 0 SlyX bZIP_1 PF00170.21 ORF89753 - 0.00022 21.3 14.0 0.00022 21.3 14.0 2.4 2 1 1 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF89753 - 0.00051 20.1 15.9 0.0012 18.9 15.9 1.7 1 0 0 1 1 1 1 Basic region leucine zipper DUF4011 PF13195.6 ORF89753 - 0.0098 15.8 2.9 0.012 15.5 2.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4011) Use1 PF09753.9 ORF89753 - 0.062 13.0 10.2 0.36 10.5 2.3 2.0 1 1 1 2 2 2 0 Membrane fusion protein Use1 Tyrosinase PF00264.20 ORF89753 - 0.16 12.3 0.8 0.18 12.1 0.8 1.0 1 0 0 1 1 1 0 Common central domain of tyrosinase MRF_C1 PF13887.6 ORF89753 - 0.26 10.5 7.1 2.7 7.2 1.3 2.4 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 Phlebovirus_NSM PF07246.11 ORF89753 - 0.31 10.4 8.9 0.5 9.7 8.9 1.3 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M Nnf1 PF03980.14 ORF89753 - 0.73 10.2 8.8 8.2 6.9 8.8 2.0 1 1 0 1 1 1 0 Nnf1 CtIP_N PF10482.9 ORF89753 - 0.9 9.6 10.3 1.7 8.7 10.3 1.6 1 1 0 1 1 1 0 Tumour-suppressor protein CtIP N-terminal domain CDC45 PF02724.14 ORF89753 - 8.5 4.5 10.6 9.3 4.4 10.6 1.0 1 0 0 1 1 1 0 CDC45-like protein AAA_lid_7 PF17867.1 ORF89639 - 0.043 14.0 0.1 0.064 13.5 0.1 1.4 1 1 0 1 1 1 0 Midasin AAA lid domain SGS PF05002.15 ORF89297 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain DUF2733 PF10813.8 ORF88689 - 9.9 6.0 6.9 3 7.7 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) AC_N PF16214.5 ORF88401 - 0.99 8.5 3.4 1.3 8.1 3.4 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Ribosomal_S6 PF01250.17 ORF88057 - 4e-28 97.5 0.1 5.2e-28 97.2 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S6 DUF2313 PF10076.9 ORF88057 - 0.063 13.1 0.0 0.3 10.9 0.0 1.8 1 1 1 2 2 2 0 Uncharacterised protein conserved in bacteria (DUF2313) Mito_carr PF00153.27 ORF87842 - 9.3e-24 83.2 0.4 6.8e-21 74.0 0.1 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein Serine_protease PF18405.1 ORF87842 - 0.0047 16.1 0.1 0.0053 16.0 0.1 1.1 1 0 0 1 1 1 1 Gammaproteobacterial serine protease zf-LITAF-like PF10601.9 ORF87780 - 2.2e-13 50.3 8.9 3e-13 49.8 8.9 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain NOA36 PF06524.12 ORF87724 - 0.75 9.1 3.2 0.88 8.8 3.2 1.1 1 0 0 1 1 1 0 NOA36 protein CENP-B_dimeris PF09026.10 ORF87724 - 4 7.9 10.6 6.1 7.3 10.6 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain CID_GANP PF16766.5 ORF87571 - 1.5 9.0 4.6 1.1 9.5 0.2 2.2 2 0 0 2 2 2 0 Binding region of GANP to ENY2 DUF2631 PF10939.8 ORF8756 - 0.12 12.2 0.0 0.34 10.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2631) NUDIX_4 PF14815.6 ORF87150 - 0.0048 16.9 0.0 0.0063 16.5 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain PTN13_u3 PF16599.5 ORF87027 - 3.8 7.5 7.2 13 5.8 2.3 2.0 2 0 0 2 2 2 0 Unstructured linker region on PTN13 protein between PDZ Dynamitin PF04912.14 ORF86096 - 0.00047 19.6 2.3 0.00051 19.5 2.3 1.0 1 0 0 1 1 1 1 Dynamitin ABC_tran_CTD PF16326.5 ORF86096 - 0.00073 19.7 5.0 0.0013 18.9 2.0 2.2 1 1 1 2 2 2 1 ABC transporter C-terminal domain Vps53_N PF04100.12 ORF86096 - 0.0043 16.1 3.6 0.0053 15.8 3.6 1.1 1 0 0 1 1 1 1 Vps53-like, N-terminal bZIP_1 PF00170.21 ORF86096 - 0.015 15.4 4.1 0.022 14.8 4.1 1.4 1 0 0 1 1 1 0 bZIP transcription factor Spc24 PF08286.11 ORF86096 - 0.021 15.1 1.0 0.021 15.1 1.0 1.7 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 DUF4164 PF13747.6 ORF86096 - 0.021 15.1 1.7 0.037 14.3 1.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4164) PilJ PF13675.6 ORF86096 - 0.048 13.7 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term APG6_N PF17675.1 ORF86096 - 0.051 14.1 5.6 0.06 13.9 5.6 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region SlyX PF04102.12 ORF86096 - 0.057 14.0 1.4 0.1 13.2 1.4 1.5 1 0 0 1 1 1 0 SlyX DUF3450 PF11932.8 ORF86096 - 0.066 12.5 1.1 0.077 12.3 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DivIC PF04977.15 ORF86096 - 0.069 12.9 1.9 0.14 12.0 1.9 1.6 1 1 0 1 1 1 0 Septum formation initiator Fib_alpha PF08702.10 ORF86096 - 0.097 12.8 5.0 0.18 12.0 5.0 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF86096 - 1.6 7.9 3.2 1.9 7.7 3.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein YdfZ PF14001.6 ORF86019 - 0.075 13.5 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 YdfZ protein Got1 PF04178.12 ORF85532 - 1e-26 93.6 8.4 1.2e-26 93.3 8.4 1.1 1 0 0 1 1 1 1 Got1/Sft2-like family EVI2A PF05399.11 ORF84569 - 8.2 5.9 9.1 13 5.3 9.1 1.3 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Peptidase_M24 PF00557.24 ORF82605 - 4.1e-20 72.4 0.1 4.6e-20 72.2 0.1 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF4131 PF13567.6 ORF82131 - 0.072 12.7 0.9 0.092 12.4 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2892 PF11127.8 ORF82131 - 0.53 10.4 7.5 2.7 8.1 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) DUF3275 PF11679.8 ORF81699 - 0.35 10.8 0.6 0.43 10.5 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) CBP PF12192.8 ORF81699 - 0.49 10.6 6.5 7.7 6.8 1.7 2.4 1 1 1 2 2 2 0 Fungal calcium binding protein Spc7 PF08317.11 ORF81408 - 0.03 13.2 8.2 0.037 12.9 8.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein IglC PF11550.8 ORF81408 - 0.095 12.2 0.8 0.15 11.5 0.4 1.5 1 1 1 2 2 2 0 Intracellular growth locus C protein V_ATPase_I PF01496.19 ORF81408 - 0.11 10.4 6.5 0.12 10.3 6.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Seryl_tRNA_N PF02403.22 ORF81408 - 0.25 11.6 8.5 3.4 7.9 6.0 2.1 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Golgin_A5 PF09787.9 ORF81408 - 0.28 10.6 9.7 0.34 10.4 9.7 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 Ly49 PF08391.10 ORF81408 - 0.95 9.8 7.5 0.78 10.1 6.6 1.3 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region ADIP PF11559.8 ORF81408 - 1.7 8.7 14.7 20 5.2 14.7 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding YlqD PF11068.8 ORF81408 - 2.5 8.5 10.6 1.1 9.7 6.1 1.9 1 1 1 2 2 2 0 YlqD protein DivIC PF04977.15 ORF81408 - 3.7 7.4 11.1 3.2 7.6 6.6 2.2 2 0 0 2 2 2 0 Septum formation initiator UPF0242 PF06785.11 ORF81408 - 6.4 6.8 10.9 8 6.5 10.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Prolamin_like PF05617.11 ORF81230 - 0.019 15.2 0.9 0.028 14.6 0.9 1.3 1 0 0 1 1 1 0 Prolamin-like ATXN-1_C PF12547.8 ORF81230 - 0.84 10.0 3.8 0.66 10.4 0.6 2.3 2 1 1 3 3 3 0 Capicua transcriptional repressor modulator ADIP PF11559.8 ORF77414 - 0.0017 18.4 26.8 0.058 13.5 9.0 2.2 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding Filament PF00038.21 ORF77414 - 0.002 17.8 21.9 0.016 14.8 21.9 1.9 1 1 0 1 1 1 1 Intermediate filament protein RPW8 PF05659.11 ORF77414 - 0.0029 17.3 9.4 0.0063 16.2 3.4 2.2 1 1 1 2 2 2 1 Arabidopsis broad-spectrum mildew resistance protein RPW8 Lectin_N PF03954.14 ORF77414 - 0.0031 17.2 4.0 0.0031 17.2 4.0 2.2 1 1 1 2 2 2 1 Hepatic lectin, N-terminal domain DUF4200 PF13863.6 ORF77414 - 0.0033 17.8 27.9 0.053 13.9 14.3 2.7 1 1 0 2 2 2 2 Domain of unknown function (DUF4200) DUF1664 PF07889.12 ORF77414 - 0.0072 16.4 7.6 0.0072 16.4 7.6 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) Fungal_TACC PF12709.7 ORF77414 - 0.0082 16.6 2.9 0.0082 16.6 2.9 3.4 1 1 2 3 3 3 1 Fungal Transforming acidic coiled-coil (TACC) proteins BLOC1_2 PF10046.9 ORF77414 - 0.01 16.1 19.7 0.16 12.3 9.5 2.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DivIC PF04977.15 ORF77414 - 0.011 15.4 31.3 0.084 12.7 7.8 3.2 1 1 2 3 3 3 0 Septum formation initiator Tropomyosin_1 PF12718.7 ORF77414 - 0.017 15.3 27.8 0.15 12.2 27.6 2.1 1 1 0 1 1 1 0 Tropomyosin like SHE3 PF17078.5 ORF77414 - 0.017 14.8 20.6 0.014 15.1 19.5 1.4 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 DUF4407 PF14362.6 ORF77414 - 0.02 14.3 20.2 0.025 13.9 20.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) MscS_porin PF12795.7 ORF77414 - 0.027 14.0 26.6 0.084 12.4 26.5 1.7 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain Golgin_A5 PF09787.9 ORF77414 - 0.039 13.4 23.7 0.043 13.3 23.7 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 CorA PF01544.18 ORF77414 - 0.045 13.1 8.8 0.063 12.6 8.8 1.3 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein Laminin_II PF06009.12 ORF77414 - 0.047 13.7 18.5 0.063 13.3 7.0 2.0 1 1 1 2 2 2 0 Laminin Domain II DHR10 PF18595.1 ORF77414 - 0.048 13.7 28.2 0.062 13.4 12.6 2.2 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Cas_DxTHG PF09455.10 ORF77414 - 0.058 13.0 13.5 0.062 12.9 13.5 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family PspA_IM30 PF04012.12 ORF77414 - 0.071 12.7 22.6 0.12 11.9 9.9 2.2 1 1 1 2 2 2 0 PspA/IM30 family TPR_MLP1_2 PF07926.12 ORF77414 - 0.072 13.2 27.2 2 8.5 26.5 2.3 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein BST2 PF16716.5 ORF77414 - 0.078 13.6 25.6 0.081 13.5 11.3 2.2 1 1 0 2 2 2 0 Bone marrow stromal antigen 2 DUF3782 PF12644.7 ORF77414 - 0.086 13.0 0.3 0.086 13.0 0.3 2.8 1 1 0 2 2 2 0 Protein of unknown function (DUF3782) Nsp1_C PF05064.13 ORF77414 - 0.087 12.6 13.0 0.24 11.2 5.8 2.3 1 1 1 2 2 2 0 Nsp1-like C-terminal region PI3K_P85_iSH2 PF16454.5 ORF77414 - 0.09 12.4 23.3 0.2 11.2 19.6 2.0 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain CCDC144C PF14915.6 ORF77414 - 0.096 11.8 25.9 0.53 9.4 25.9 1.8 1 1 0 1 1 1 0 CCDC144C protein coiled-coil region GrpE PF01025.19 ORF77414 - 0.15 11.7 24.7 0.61 9.7 9.1 2.2 1 1 1 2 2 2 0 GrpE YscO PF07321.12 ORF77414 - 0.17 11.9 19.5 0.38 10.7 9.5 2.2 1 1 1 2 2 2 0 Type III secretion protein YscO DUF4140 PF13600.6 ORF77414 - 0.19 12.2 22.6 3.2 8.3 3.5 3.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Cob_adeno_trans PF01923.18 ORF77414 - 0.2 11.8 7.6 0.081 13.1 4.7 1.8 1 1 1 2 2 2 0 Cobalamin adenosyltransferase Seryl_tRNA_N PF02403.22 ORF77414 - 0.21 11.8 26.9 0.18 12.1 14.8 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Rootletin PF15035.6 ORF77414 - 0.22 11.5 22.1 0.25 11.4 4.6 2.6 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion SlyX PF04102.12 ORF77414 - 0.29 11.8 17.1 16 6.2 6.9 3.4 1 1 1 2 2 2 0 SlyX DUF4201 PF13870.6 ORF77414 - 0.31 10.8 25.5 0.37 10.5 5.5 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4201) TMF_DNA_bd PF12329.8 ORF77414 - 0.32 11.0 35.7 1.5 8.8 7.6 3.1 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF724 PF05266.14 ORF77414 - 0.35 10.7 24.7 0.33 10.8 12.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Uso1_p115_C PF04871.13 ORF77414 - 0.36 11.2 30.0 2.4 8.5 7.5 2.2 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region FlaC_arch PF05377.11 ORF77414 - 0.39 11.2 15.3 0.83 10.1 1.0 3.4 1 1 3 4 4 4 0 Flagella accessory protein C (FlaC) Snapin_Pallidin PF14712.6 ORF77414 - 0.39 11.1 21.2 2.4 8.6 9.5 2.8 1 1 2 3 3 3 0 Snapin/Pallidin FUSC PF04632.12 ORF77414 - 0.43 9.1 1.8 0.47 8.9 1.8 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF3450 PF11932.8 ORF77414 - 0.44 9.8 25.8 3.1 7.1 11.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) COG2 PF06148.11 ORF77414 - 0.5 10.5 12.6 1.3 9.1 6.0 2.1 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DASH_Dad4 PF08650.10 ORF77414 - 0.5 10.4 5.7 0.5 10.4 0.2 2.9 1 1 3 4 4 3 0 DASH complex subunit Dad4 GvpK PF05121.12 ORF77414 - 0.52 10.4 10.6 0.096 12.7 1.9 2.4 2 1 0 2 2 2 0 Gas vesicle protein K Not3 PF04065.15 ORF77414 - 0.54 9.6 22.4 3.1 7.2 8.9 2.1 1 1 1 2 2 2 0 Not1 N-terminal domain, CCR4-Not complex component UPF0242 PF06785.11 ORF77414 - 0.61 10.2 26.6 0.21 11.7 23.9 1.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus GAS PF13851.6 ORF77414 - 0.62 9.4 27.3 1.4 8.2 27.3 1.6 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Fez1 PF06818.15 ORF77414 - 0.67 10.4 22.9 1 9.7 10.9 2.0 1 1 1 2 2 2 0 Fez1 ATG16 PF08614.11 ORF77414 - 0.73 10.0 24.8 58 3.8 24.8 2.1 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Fzo_mitofusin PF04799.13 ORF77414 - 0.84 9.2 14.9 0.79 9.3 7.1 2.2 1 1 1 2 2 2 0 fzo-like conserved region DUF641 PF04859.12 ORF77414 - 0.9 9.9 19.6 0.38 11.1 10.3 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) CLZ PF16526.5 ORF77414 - 1.1 9.7 20.0 1.2 9.6 3.2 2.7 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels EzrA PF06160.12 ORF77414 - 1.3 7.1 23.4 1.8 6.7 23.4 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Spc7 PF08317.11 ORF77414 - 1.3 7.8 26.5 3.3 6.5 26.5 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF1640 PF07798.11 ORF77414 - 1.3 9.0 19.5 3.8 7.5 19.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) KASH_CCD PF14662.6 ORF77414 - 1.4 8.7 26.6 3.4 7.4 26.6 1.6 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DUF3251 PF11622.8 ORF77414 - 1.4 8.5 12.7 0.69 9.5 1.4 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3251) MutS_IV PF05190.18 ORF77414 - 1.5 9.3 12.3 1.6 9.1 0.7 3.2 2 1 1 3 3 3 0 MutS family domain IV Swi5 PF07061.11 ORF77414 - 1.6 8.9 21.6 2.1 8.5 2.1 3.3 1 1 2 3 3 3 0 Swi5 DUF5394 PF17372.2 ORF77414 - 1.6 8.2 21.2 2.6 7.5 21.2 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5394) Atg14 PF10186.9 ORF77414 - 1.7 7.7 26.8 0.088 11.9 15.2 2.0 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Jnk-SapK_ap_N PF09744.9 ORF77414 - 1.7 8.8 23.8 6.7 6.9 23.9 1.8 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 bZIP_2 PF07716.15 ORF77414 - 1.8 8.7 20.9 0.4 10.8 1.6 4.1 2 2 3 5 5 5 0 Basic region leucine zipper GldM_N PF12081.8 ORF77414 - 1.9 8.5 20.2 0.11 12.5 9.0 2.1 1 1 1 2 2 2 0 GldM N-terminal domain DUF16 PF01519.16 ORF77414 - 2 8.9 23.0 3.2 8.3 11.0 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF5082 PF16888.5 ORF77414 - 2.1 8.7 26.4 1.1e+02 3.0 26.4 3.1 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) GBP_C PF02841.14 ORF77414 - 2.1 7.7 27.3 1.3 8.4 8.2 2.0 1 1 1 2 2 2 0 Guanylate-binding protein, C-terminal domain Striatin PF08232.12 ORF77414 - 2.2 8.9 21.7 1.1 9.8 1.8 2.5 1 1 1 2 2 2 0 Striatin family HrpB7 PF09486.10 ORF77414 - 2.2 8.7 15.9 1e+02 3.2 15.9 2.8 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) CENP-H PF05837.12 ORF77414 - 2.3 8.7 22.3 2.7 8.4 13.4 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) zf-C4H2 PF10146.9 ORF77414 - 2.3 8.5 20.6 2.5 8.4 3.7 2.3 1 1 1 2 2 2 0 Zinc finger-containing protein DUF948 PF06103.11 ORF77414 - 2.5 8.4 6.0 2.3e+02 2.1 5.5 2.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) AAA_13 PF13166.6 ORF77414 - 2.7 6.5 23.7 5.7 5.5 23.7 1.5 1 1 0 1 1 1 0 AAA domain RmuC PF02646.16 ORF77414 - 2.8 7.0 19.7 0.94 8.5 8.5 2.1 2 0 0 2 2 2 0 RmuC family Fib_alpha PF08702.10 ORF77414 - 2.8 8.1 18.8 7.2 6.8 18.5 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Not1 PF04054.15 ORF77414 - 2.8 6.8 7.2 3.3 6.5 7.2 1.1 1 0 0 1 1 1 0 CCR4-Not complex component, Not1 SseC PF04888.12 ORF77414 - 3 7.4 20.7 1.9 8.0 5.6 2.1 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family DUF773 PF05600.12 ORF77414 - 3.3 6.3 24.9 0.057 12.1 7.6 2.0 1 1 1 2 2 2 0 CDK5 regulatory subunit-associated protein 3 Mt_ATP-synt_D PF05873.12 ORF77414 - 3.4 7.5 17.9 1.7 8.5 4.3 2.3 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) FlxA PF14282.6 ORF77414 - 3.5 7.7 38.5 2 8.4 9.4 3.2 1 1 2 3 3 3 0 FlxA-like protein Ax_dynein_light PF10211.9 ORF77414 - 3.7 7.5 27.6 7 6.6 14.9 2.0 1 1 1 2 2 2 0 Axonemal dynein light chain DUF3584 PF12128.8 ORF77414 - 3.8 4.9 24.9 12 3.3 25.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) TolA_bind_tri PF16331.5 ORF77414 - 3.8 7.6 20.7 0.57 10.3 5.2 2.6 1 1 0 2 2 2 0 TolA binding protein trimerisation NPV_P10 PF05531.12 ORF77414 - 4 8.0 16.0 4.4 7.9 4.1 2.7 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DASH_Hsk3 PF08227.11 ORF77414 - 4.3 7.8 8.2 14 6.1 1.7 3.4 3 1 0 3 3 2 0 DASH complex subunit Hsk3 like APG6_N PF17675.1 ORF77414 - 4.5 7.8 30.2 14 6.2 17.7 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region YabA PF06156.13 ORF77414 - 4.7 7.9 18.4 10 6.8 1.8 2.7 1 1 1 2 2 2 0 Initiation control protein YabA Exonuc_VII_L PF02601.15 ORF77414 - 4.7 6.7 18.2 6.5 6.2 18.2 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Vir_act_alpha_C PF10400.9 ORF77414 - 4.8 7.9 11.0 8.6 7.1 2.6 2.8 1 1 2 3 3 3 0 Virulence activator alpha C-term CDC37_N PF03234.14 ORF77414 - 5.2 8.0 19.9 3.3 8.6 16.2 1.9 1 1 1 2 2 2 0 Cdc37 N terminal kinase binding DUF848 PF05852.11 ORF77414 - 5.6 7.1 16.2 4.3 7.4 9.2 2.1 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) DUF812 PF05667.11 ORF77414 - 5.6 5.7 26.9 97 1.6 26.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF812) PRKG1_interact PF15898.5 ORF77414 - 6.7 7.7 22.8 2.5 9.1 3.2 2.7 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Prefoldin PF02996.17 ORF77414 - 8.2 6.4 22.9 1.3 9.0 2.8 3.1 1 1 1 3 3 3 0 Prefoldin subunit RR_TM4-6 PF06459.12 ORF73031 - 0.58 9.9 15.5 0.69 9.7 15.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF2151 PF10221.9 ORF73031 - 0.88 8.1 12.9 1 7.9 12.9 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator IHABP4_N PF16174.5 ORF73031 - 1.5 9.4 20.4 2 9.0 20.4 1.1 1 0 0 1 1 1 0 Intracellular hyaluronan-binding protein 4 N-terminal SOBP PF15279.6 ORF73031 - 1.8 9.1 20.0 2.1 8.9 20.0 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein XRN_M PF17846.1 ORF73031 - 2.8 6.8 9.2 3.2 6.6 9.2 1.0 1 0 0 1 1 1 0 Xrn1 helical domain Presenilin PF01080.17 ORF73031 - 3.9 6.1 14.0 4.5 5.9 14.0 1.1 1 0 0 1 1 1 0 Presenilin DUF3807 PF12720.7 ORF73031 - 4.8 7.4 16.9 6 7.1 16.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Mitofilin PF09731.9 ORF73031 - 5.4 5.7 19.8 6.3 5.5 19.8 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein PIEZO PF15917.5 ORF73031 - 6.2 6.2 13.9 7.3 6.0 13.9 1.1 1 0 0 1 1 1 0 Piezo Neur_chan_memb PF02932.16 ORF73031 - 7.3 6.6 11.1 9 6.3 11.1 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region O-antigen_lig PF13425.6 ORF73031 - 7.7 5.2 8.8 8.6 5.0 8.8 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Zip PF02535.22 ORF73031 - 7.8 5.6 8.1 9 5.4 8.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Borrelia_lipo_1 PF05714.11 ORF71537 - 0.11 12.3 0.4 0.13 12.0 0.4 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi virulent strain associated lipoprotein Benyvirus_14KDa PF07255.11 ORF7145 - 0.078 13.2 0.4 0.13 12.5 0.2 1.4 1 1 0 1 1 1 0 Benyvirus 14KDa protein Mer2 PF09074.10 ORF70930 - 0.048 13.5 4.7 0.05 13.4 4.1 1.4 1 1 0 1 1 1 0 Mer2 MRP-S32 PF10210.9 ORF70930 - 0.21 12.2 3.2 0.12 13.0 1.1 1.5 2 0 0 2 2 2 0 Mitochondrial 28S ribosomal protein S32 DUF5414 PF17435.2 ORF69544 - 0.038 13.7 0.0 0.049 13.3 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5414) Torus PF16131.5 ORF69320 - 0.097 13.4 0.9 0.14 12.8 0.5 1.6 2 0 0 2 2 2 0 Torus domain PHTB1_C PF14728.6 ORF68727 - 0.029 13.5 0.0 0.032 13.3 0.0 1.1 1 0 0 1 1 1 0 PTHB1 C-terminus SGS PF05002.15 ORF68615 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain PBECR5 PF18814.1 ORF6752 - 0.0064 16.5 4.0 0.0073 16.3 4.0 1.0 1 0 0 1 1 1 1 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5 TMEM71 PF15121.6 ORF66516 - 0.0056 16.3 0.6 0.0075 15.9 0.6 1.3 1 0 0 1 1 1 1 TMEM71 protein family Gal_Lectin PF02140.18 ORF66442 - 0.27 11.7 4.3 0.52 10.8 1.2 2.1 1 1 1 2 2 2 0 Galactose binding lectin domain FAD_SOX PF18371.1 ORF66442 - 0.67 10.3 4.1 1 9.8 0.5 2.4 1 1 1 2 2 2 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase Sox_N PF12444.8 ORF64587 - 0.39 11.9 2.3 4.8 8.4 2.3 2.2 1 1 0 1 1 1 0 Sox developmental protein N terminal zf-RING_2 PF13639.6 ORF63492 - 7.7e-11 42.2 7.4 7.7e-11 42.2 7.4 1.6 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF63492 - 1.2e-07 31.3 11.9 4.1e-07 29.6 5.9 3.1 3 0 0 3 3 3 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF63492 - 2.3e-07 31.0 8.8 5.9e-07 29.7 8.8 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF63492 - 3.4e-07 30.0 7.6 3.4e-07 30.0 7.6 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF63492 - 1.2e-06 28.4 1.1 1.2e-06 28.4 1.1 2.1 2 1 1 3 3 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF63492 - 2.1e-05 24.3 6.2 2.1e-05 24.3 6.2 1.4 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF63492 - 8.2e-05 22.7 8.8 0.00021 21.4 8.8 1.6 1 1 0 1 1 1 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF63492 - 0.00019 21.2 6.7 0.00034 20.4 6.7 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF63492 - 0.00039 20.2 9.4 0.00039 20.2 9.4 2.1 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF63492 - 0.00049 20.0 8.9 0.00049 20.0 8.9 1.7 2 0 0 2 2 2 1 zinc-RING finger domain DUF1644 PF07800.12 ORF63492 - 0.00073 19.7 0.9 0.001 19.2 0.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1644) zf-ANAPC11 PF12861.7 ORF63492 - 0.0019 18.2 6.2 0.0059 16.6 6.2 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF63492 - 0.0019 17.8 12.0 0.0059 16.2 10.7 2.0 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF63492 - 0.011 15.9 4.9 0.041 14.0 4.9 1.9 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING RINGv PF12906.7 ORF63492 - 0.013 15.6 7.4 0.024 14.8 7.4 1.5 1 0 0 1 1 1 0 RING-variant domain Prok-RING_1 PF14446.6 ORF63492 - 0.015 15.2 11.0 0.024 14.6 3.9 2.4 2 1 1 3 3 2 0 Prokaryotic RING finger family 1 CMAS PF02353.20 ORF63492 - 0.016 14.5 0.0 0.019 14.3 0.0 1.0 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Rad50_zn_hook PF04423.14 ORF63492 - 0.023 14.5 0.2 0.023 14.5 0.2 1.7 2 0 0 2 2 2 0 Rad50 zinc hook motif DUF2325 PF10087.9 ORF63492 - 0.028 14.5 0.3 0.044 13.9 0.3 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2325) PHD PF00628.29 ORF63492 - 0.056 13.4 9.1 0.091 12.7 9.1 1.4 1 0 0 1 1 1 0 PHD-finger DUF2256 PF10013.9 ORF63492 - 0.07 13.3 0.5 1.8 8.7 0.1 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-HC5HC2H PF13771.6 ORF63492 - 0.1 12.8 8.6 0.11 12.8 4.3 2.0 1 1 1 2 2 2 0 PHD-like zinc-binding domain zf-RING_4 PF14570.6 ORF63492 - 0.12 12.1 4.9 0.27 11.0 4.9 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain PHF5 PF03660.14 ORF63492 - 0.25 11.6 4.8 1.2 9.3 1.5 2.1 1 1 1 2 2 2 0 PHF5-like protein zf-RING-like PF08746.11 ORF63492 - 0.49 10.8 7.7 1.3 9.4 7.7 1.8 1 1 0 1 1 1 0 RING-like domain zf-HC5HC2H_2 PF13832.6 ORF63492 - 0.63 10.2 8.2 0.38 10.9 5.5 1.8 1 1 1 2 2 2 0 PHD-zinc-finger like domain Ter PF05472.11 ORF63417 - 0.097 11.7 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 DNA replication terminus site-binding protein (Ter protein) Toxin_8 PF07365.12 ORF63051 - 0.092 12.9 1.4 0.31 11.3 0.3 2.3 3 0 0 3 3 3 0 Alpha conotoxin precursor Sperm_Ag_HE2 PF05324.13 ORF62583 - 0.032 14.7 1.5 0.088 13.3 0.3 2.0 1 1 1 2 2 2 0 Sperm antigen HE2 Ustilago_mating PF05722.12 ORF62224 - 0.15 11.6 5.6 0.19 11.2 5.6 1.2 1 0 0 1 1 1 0 Ustilago B locus mating-type protein Ribosomal_S4e PF00900.20 ORF61974 - 0.028 14.3 0.5 0.049 13.5 0.5 1.4 1 0 0 1 1 1 0 Ribosomal family S4e FidL_like PF15941.5 ORF61974 - 1.2 9.7 4.8 2.5 8.6 1.8 2.1 2 0 0 2 2 2 0 FidL-like putative membrane protein Aa_trans PF01490.18 ORF6171 - 1.5e-14 53.5 1.5 1.8e-14 53.3 1.5 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF808 PF05661.12 ORF6171 - 0.1 11.6 1.0 3.6 6.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF808) DUF202 PF02656.15 ORF6171 - 0.19 12.2 4.6 0.38 11.2 4.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF3040 PF11239.8 ORF6171 - 0.25 11.6 3.4 8.9 6.7 0.7 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF3040) Phage_holin_3_6 PF07332.11 ORF6171 - 5.4 7.1 8.0 4.2 7.4 6.7 1.4 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III LpxC PF03331.13 ORF61198 - 3.3e-43 148.1 0.1 3.8e-43 147.9 0.1 1.0 1 0 0 1 1 1 1 UDP-3-O-acyl N-acetylglycosamine deacetylase Headcase PF16002.5 ORF60506 - 0.068 12.6 1.1 0.13 11.7 1.0 1.5 1 1 1 2 2 2 0 Headcase protein SgrT PF15894.5 ORF59763 - 4.6e-08 32.9 1.3 4.6e-08 32.9 1.3 2.3 2 0 0 2 2 2 1 Inhibitor of glucose uptake transporter SgrT Phage_tail_T PF06223.12 ORF59532 - 0.1 13.1 0.0 0.14 12.7 0.0 1.3 1 0 0 1 1 1 0 Minor tail protein T Ribosomal_S11 PF00411.19 ORF59515 - 5.2e-44 149.1 1.3 6.2e-44 148.9 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 SGS PF05002.15 ORF58782 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain CHS5_N PF16892.5 ORF58731 - 1e-12 47.8 0.0 1.4e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Chitin biosynthesis protein CHS5 N-terminus DUF3006 PF11213.8 ORF58731 - 6.9e-10 39.0 0.0 6.9e-10 39.0 0.0 1.8 2 1 0 2 2 2 1 Protein of unknown function (DUF3006) SYCE1 PF15233.6 ORF58677 - 0.013 15.6 14.3 0.022 14.8 14.3 1.4 1 1 0 1 1 1 0 Synaptonemal complex central element protein 1 DUF773 PF05600.12 ORF58677 - 0.082 11.6 10.7 0.1 11.3 10.7 1.1 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 CENP-F_leu_zip PF10473.9 ORF58677 - 0.18 11.8 17.3 0.66 10.0 11.2 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FAM76 PF16046.5 ORF58677 - 1.1 8.6 11.8 0.61 9.4 10.0 1.5 1 1 0 1 1 1 0 FAM76 protein Macoilin PF09726.9 ORF58677 - 1.1 7.7 15.8 1.3 7.5 7.9 2.0 1 1 1 2 2 2 0 Macoilin family zf-C4H2 PF10146.9 ORF58677 - 1.3 9.3 14.7 1.5 9.1 14.7 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein BST2 PF16716.5 ORF58677 - 1.4 9.5 12.0 4.6 7.9 1.0 2.2 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 LMBR1 PF04791.16 ORF58677 - 1.7 7.5 9.3 1.9 7.3 9.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein WDCP PF15390.6 ORF58677 - 1.7 6.9 10.0 2.1 6.6 10.0 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Exonuc_VII_L PF02601.15 ORF58677 - 1.8 8.1 8.5 2.1 7.8 8.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Spc24 PF08286.11 ORF58677 - 3.2 8.0 14.1 12 6.2 6.9 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 PRP1_N PF06424.12 ORF58677 - 4.7 7.6 7.2 3 8.2 2.7 2.1 1 1 0 2 2 2 0 PRP1 splicing factor, N-terminal APG6_N PF17675.1 ORF58677 - 4.9 7.7 13.6 4.3 7.9 6.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Ly49 PF08391.10 ORF58677 - 5.3 7.4 11.6 4.8 7.6 8.5 2.0 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region DUF1664 PF07889.12 ORF58677 - 8.2 6.5 13.7 12 6.0 1.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) VGCC_alpha2 PF08473.11 ORF58582 - 0.054 12.3 0.0 0.066 12.0 0.0 1.1 1 0 0 1 1 1 0 Neuronal voltage-dependent calcium channel alpha 2acd zf-4CXXC_R1 PF10497.9 ORF58582 - 0.16 12.2 0.0 0.25 11.6 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Myc_N PF01056.18 ORF5769 - 0.082 12.8 0.2 0.09 12.7 0.2 1.0 1 0 0 1 1 1 0 Myc amino-terminal region Rota_NSP4 PF01452.16 ORF57373 - 0.0093 15.7 0.6 0.014 15.0 0.2 1.5 1 1 1 2 2 2 1 Rotavirus non structural protein Gamma_PGA_hydro PF05908.11 ORF57250 - 0.00016 21.1 0.3 0.00022 20.7 0.3 1.3 1 0 0 1 1 1 1 Poly-gamma-glutamate hydrolase SYCE1 PF15233.6 ORF56398 - 0.013 15.6 14.3 0.022 14.8 14.3 1.4 1 1 0 1 1 1 0 Synaptonemal complex central element protein 1 DUF773 PF05600.12 ORF56398 - 0.082 11.6 10.7 0.1 11.3 10.7 1.1 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 CENP-F_leu_zip PF10473.9 ORF56398 - 0.18 11.8 17.3 0.66 10.0 11.2 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FAM76 PF16046.5 ORF56398 - 1.1 8.6 11.8 0.61 9.4 10.0 1.5 1 1 0 1 1 1 0 FAM76 protein Macoilin PF09726.9 ORF56398 - 1.1 7.7 15.8 1.3 7.5 7.9 2.0 1 1 1 2 2 2 0 Macoilin family zf-C4H2 PF10146.9 ORF56398 - 1.3 9.3 14.7 1.5 9.1 14.7 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein BST2 PF16716.5 ORF56398 - 1.4 9.5 12.0 4.6 7.9 1.0 2.2 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 LMBR1 PF04791.16 ORF56398 - 1.7 7.5 9.3 1.9 7.3 9.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein WDCP PF15390.6 ORF56398 - 1.7 6.9 10.0 2.1 6.6 10.0 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Exonuc_VII_L PF02601.15 ORF56398 - 1.8 8.1 8.5 2.1 7.8 8.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Spc24 PF08286.11 ORF56398 - 3.2 8.0 14.1 12 6.2 6.9 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 PRP1_N PF06424.12 ORF56398 - 4.7 7.6 7.2 3 8.2 2.7 2.1 1 1 0 2 2 2 0 PRP1 splicing factor, N-terminal APG6_N PF17675.1 ORF56398 - 4.9 7.7 13.6 4.3 7.9 6.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Ly49 PF08391.10 ORF56398 - 5.3 7.4 11.6 4.8 7.6 8.5 2.0 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region DUF1664 PF07889.12 ORF56398 - 8.2 6.5 13.7 12 6.0 1.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FmiP_Thoc5 PF09766.9 ORF55471 - 0.011 15.0 1.1 0.011 15.0 1.1 1.7 1 1 1 2 2 2 0 Fms-interacting protein/Thoc5 BCL_N PF04714.13 ORF55471 - 0.16 12.0 0.4 0.16 12.0 0.4 2.3 2 1 0 2 2 2 0 BCL7, N-terminal conserver region XhlA PF10779.9 ORF55471 - 0.22 11.7 2.5 0.32 11.2 0.1 2.3 2 1 0 2 2 2 0 Haemolysin XhlA DUF1664 PF07889.12 ORF55471 - 0.41 10.7 3.7 0.15 12.1 0.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF3347 PF11827.8 ORF55471 - 1.5 9.0 5.9 2.2 8.4 5.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3347) Parecho_VpG PF06344.11 ORF55358 - 0.17 12.5 0.4 0.17 12.5 0.4 2.6 2 0 0 2 2 2 0 Parechovirus Genome-linked protein Spermine_synt_N PF17284.2 ORF53867 - 0.15 11.9 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Spermidine synthase tetramerisation domain Nop10p PF04135.12 ORF53606 - 0.067 13.2 3.7 0.13 12.3 3.0 1.9 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family UPF0228 PF05727.11 ORF52862 - 0.023 14.5 0.1 0.038 13.8 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0228) Claudin_3 PF06653.11 ORF52693 - 7.8 6.4 11.0 1.3 8.9 5.5 1.9 2 0 0 2 2 2 0 Tight junction protein, Claudin-like TOM13 PF08219.11 ORF51979 - 0.18 11.8 0.1 0.31 11.1 0.1 1.3 1 0 0 1 1 1 0 Outer membrane protein TOM13 ROK PF00480.20 ORF51441 - 0.00015 21.3 0.0 0.00019 21.0 0.0 1.1 1 0 0 1 1 1 1 ROK family LAM_C PF12544.8 ORF51161 - 0.18 12.0 1.4 0.21 11.8 1.4 1.1 1 0 0 1 1 1 0 Lysine-2,3-aminomutase Rotamase PF00639.21 ORF49663 - 1.6e-24 86.6 0.1 3.5e-24 85.6 0.0 1.6 2 0 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF49663 - 2.1e-24 86.3 0.0 3.9e-24 85.4 0.0 1.4 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF49663 - 1e-07 32.8 0.3 2e-07 31.9 0.1 1.6 1 1 1 2 2 2 1 PPIC-type PPIASE domain HTH_3 PF01381.22 ORF48898 - 1.5e-10 40.9 0.0 7.1e-10 38.8 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 ORF48898 - 2.5e-06 27.4 0.3 6.2e-06 26.1 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_17 PF12728.7 ORF48898 - 0.0015 18.6 0.1 0.006 16.7 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 ORF48898 - 0.0032 17.8 0.0 0.012 15.9 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_30 PF13556.6 ORF48898 - 0.014 15.2 1.4 0.023 14.5 0.4 2.0 2 1 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Sigma54_DBD PF04552.13 ORF48898 - 0.017 14.8 0.6 0.021 14.5 0.0 1.5 2 0 0 2 2 2 0 Sigma-54, DNA binding domain UPF0122 PF04297.14 ORF48898 - 0.033 14.4 0.7 0.084 13.1 0.7 1.8 1 1 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_26 PF13443.6 ORF48898 - 0.037 14.5 0.1 0.19 12.2 0.0 2.1 1 1 1 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 ORF48898 - 0.069 13.1 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain LacI PF00356.21 ORF48898 - 0.092 12.6 0.1 0.26 11.1 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family MarR_2 PF12802.7 ORF48898 - 0.1 12.5 0.0 0.22 11.4 0.0 1.7 1 1 0 1 1 1 0 MarR family YdaS_antitoxin PF15943.5 ORF48898 - 0.11 12.4 0.0 0.24 11.3 0.0 1.7 1 1 1 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT EVI2A PF05399.11 ORF47661 - 8.2 5.9 9.1 13 5.3 9.1 1.3 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) BLOC1_2 PF10046.9 ORF46306 - 0.00017 21.8 9.8 0.00017 21.8 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_TATA_bd PF12325.8 ORF46306 - 0.0052 17.0 10.8 0.29 11.4 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding GAS PF13851.6 ORF46306 - 0.015 14.6 13.1 0.014 14.7 12.1 1.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF46306 - 0.017 12.7 6.9 0.02 12.4 6.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Spc7 PF08317.11 ORF46306 - 0.017 14.0 9.4 0.022 13.6 9.4 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Leu_zip PF15294.6 ORF46306 - 0.019 14.5 10.1 0.023 14.2 10.1 1.1 1 0 0 1 1 1 0 Leucine zipper Baculo_PEP_C PF04513.12 ORF46306 - 0.025 14.6 6.6 0.032 14.3 6.6 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Vps53_N PF04100.12 ORF46306 - 0.029 13.3 7.1 0.011 14.7 4.3 1.5 1 1 0 1 1 1 0 Vps53-like, N-terminal DUF1664 PF07889.12 ORF46306 - 0.049 13.7 9.6 0.37 10.8 4.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) ZnuA PF01297.17 ORF46306 - 0.062 12.7 1.5 0.081 12.3 1.5 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic PRKG1_interact PF15898.5 ORF46306 - 0.073 14.0 7.0 0.58 11.1 0.5 2.3 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain CEP63 PF17045.5 ORF46306 - 0.088 12.7 9.6 0.47 10.3 9.5 1.8 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa ATG16 PF08614.11 ORF46306 - 0.1 12.8 8.5 1.2 9.3 1.1 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DivIC PF04977.15 ORF46306 - 0.11 12.3 9.3 1.6 8.5 1.5 2.5 1 1 1 2 2 2 0 Septum formation initiator Tuberin PF03542.16 ORF46306 - 0.11 11.6 3.2 0.12 11.5 3.2 1.0 1 0 0 1 1 1 0 Tuberin RasGAP_C PF03836.15 ORF46306 - 0.2 11.8 8.6 2.5 8.2 2.8 2.1 1 1 1 2 2 2 0 RasGAP C-terminus TSNAXIP1_N PF15739.5 ORF46306 - 0.21 12.0 7.7 0.14 12.6 0.7 2.3 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus Fib_alpha PF08702.10 ORF46306 - 0.22 11.7 11.2 3.3 7.9 0.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Macoilin PF09726.9 ORF46306 - 0.24 9.9 8.6 0.35 9.4 8.6 1.2 1 0 0 1 1 1 0 Macoilin family Spc24 PF08286.11 ORF46306 - 0.26 11.5 10.8 55 4.1 10.8 2.2 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 TMPIT PF07851.13 ORF46306 - 0.32 10.2 7.2 0.17 11.1 4.8 1.5 1 1 1 2 2 2 0 TMPIT-like protein Tup_N PF08581.10 ORF46306 - 0.35 11.2 10.0 4.7 7.6 1.0 2.2 1 1 1 2 2 2 0 Tup N-terminal BPL_N PF09825.9 ORF46306 - 0.61 9.1 4.8 0.69 8.9 4.8 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal Csm2_III-A PF03750.13 ORF46306 - 0.73 10.7 5.8 0.61 10.9 2.2 2.0 1 1 1 2 2 2 0 Csm2 Type III-A FlaC_arch PF05377.11 ORF46306 - 1 9.8 13.4 3.5 8.1 0.8 3.5 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) UPF0242 PF06785.11 ORF46306 - 1 9.4 10.4 1.3 9.1 10.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5595 PF18077.1 ORF46306 - 1.6 8.9 8.2 1.9 8.6 2.4 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5595) USP8_interact PF08941.10 ORF46306 - 1.8 8.3 8.7 0.29 10.9 0.7 2.0 1 1 1 2 2 2 0 USP8 interacting NPV_P10 PF05531.12 ORF46306 - 3.5 8.2 10.5 4.4 7.8 6.8 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 ORF46306 - 5.7 7.6 10.9 4.4e+02 1.6 10.9 2.2 1 1 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF46306 - 6.3 7.5 7.9 14 6.4 3.1 2.5 1 1 2 3 3 3 0 SlyX PIN_11 PF18479.1 ORF43529 - 0.18 12.0 0.0 0.26 11.5 0.0 1.2 1 0 0 1 1 1 0 PIN like domain LPD11 PF18824.1 ORF42849 - 0.047 13.8 1.2 0.15 12.1 0.1 2.3 2 1 1 3 3 3 0 Large polyvalent protein-associated domain 11 DUF3841 PF12952.7 ORF41398 - 9.7e-05 22.2 0.3 0.00012 21.9 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3841) UvrB_inter PF17757.1 ORF41398 - 0.068 13.4 0.4 0.11 12.7 0.4 1.4 1 0 0 1 1 1 0 UvrB interaction domain PHTB1_C PF14728.6 ORF4086 - 0.029 13.5 0.0 0.032 13.3 0.0 1.1 1 0 0 1 1 1 0 PTHB1 C-terminus PHA_synth_III_E PF09712.10 ORF39719 - 0.015 14.4 0.5 0.019 14.1 0.5 1.1 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) LETM1 PF07766.13 ORF39719 - 0.029 13.7 2.8 0.038 13.3 2.8 1.2 1 0 0 1 1 1 0 LETM1-like protein MitMem_reg PF13012.6 ORF39719 - 0.057 13.8 0.4 0.083 13.3 0.4 1.2 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function LMBR1 PF04791.16 ORF39719 - 0.97 8.3 3.2 1.1 8.1 3.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein MORN PF02493.20 ORF39007 - 6.6e-07 28.9 6.6 0.015 15.1 0.0 3.8 4 0 0 4 4 4 3 MORN repeat DUF1731 PF08338.11 ORF37897 - 9.2e-20 70.2 0.2 1.4e-19 69.6 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1731) Epimerase PF01370.21 ORF37897 - 0.013 15.0 0.1 0.026 14.0 0.0 1.5 1 1 1 2 2 2 0 NAD dependent epimerase/dehydratase family DUF2070 PF09843.9 ORF34952 - 2.7 6.2 8.5 2.7 6.2 8.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) SGS PF05002.15 ORF34520 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain Carb_anhydrase PF00194.21 ORF34132 - 2.4e-12 46.9 0.0 2.9e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMIE PF16038.5 ORF34132 - 0.0079 16.0 0.2 0.014 15.2 0.2 1.3 1 0 0 1 1 1 1 TMIE protein CRIM PF16978.5 ORF33860 - 8.6e-05 22.7 0.1 9.1e-05 22.6 0.1 1.1 1 0 0 1 1 1 1 SAPK-interacting protein 1 (Sin1), middle CRIM domain zf-C2HC PF01530.18 ORF33250 - 4.5 7.6 8.1 9.5 6.5 0.3 2.9 3 0 0 3 3 3 0 Zinc finger, C2HC type Fz PF01392.22 ORF3200 - 0.038 14.6 2.0 0.038 14.6 2.0 2.1 1 1 0 2 2 2 0 Fz domain Complex1_LYR PF05347.15 ORF31715 - 0.00063 19.7 0.0 0.0012 18.8 0.0 1.5 1 0 0 1 1 1 1 Complex 1 protein (LYR family) RD3 PF14473.6 ORF31715 - 0.012 15.5 0.1 0.021 14.7 0.1 1.4 1 1 0 1 1 1 0 RD3 protein GST_C_3 PF14497.6 ORF31606 - 2.3e-10 40.6 0.4 3.2e-10 40.1 0.4 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF31606 - 0.00031 20.9 0.1 0.00044 20.4 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain VirE PF05272.11 ORF31606 - 0.022 14.5 0.2 5.2 6.7 0.0 2.0 1 1 1 2 2 2 0 Virulence-associated protein E ADIP PF11559.8 ORF31569 - 0.013 15.6 10.0 0.041 14.0 9.0 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Helo_like_N PF17111.5 ORF31569 - 0.028 13.8 5.3 0.034 13.5 5.3 1.2 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins DUF1664 PF07889.12 ORF31569 - 0.086 12.9 8.1 0.21 11.6 6.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Sec5 PF15469.6 ORF31569 - 0.097 12.5 6.9 0.13 12.1 0.1 2.0 1 1 1 2 2 2 0 Exocyst complex component Sec5 PKcGMP_CC PF16808.5 ORF31569 - 0.22 11.4 6.3 0.58 10.1 2.4 2.7 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Tho2 PF11262.8 ORF31569 - 0.34 10.1 5.5 0.41 9.8 5.5 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Ly49 PF08391.10 ORF31569 - 0.48 10.8 5.2 1.6 9.1 5.2 1.8 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region Cnn_1N PF07989.11 ORF31569 - 1 9.6 9.4 68 3.7 9.4 2.3 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 UQ_con PF00179.26 ORF30499 - 9e-30 103.2 0.1 1e-29 103.0 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UPF1_Zn_bind PF09416.10 ORF30499 - 0.1 12.5 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) PSI_PsaE PF02427.17 ORF28926 - 3.9e-24 84.1 1.3 5.2e-24 83.7 1.3 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IV / PsaE Zds_C PF08632.10 ORF28710 - 0.19 11.5 0.1 0.97 9.2 0.2 2.0 2 0 0 2 2 2 0 Activator of mitotic machinery Cdc14 phosphatase activation C-term Pkinase PF00069.25 ORF27442 - 3.6e-19 69.1 0.0 4.3e-19 68.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF27442 - 1.2e-07 31.3 0.0 1.3e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF5039 PF16442.5 ORF27442 - 0.0026 17.3 0.0 0.0033 17.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5039) SGS PF05002.15 ORF27386 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain DUF496 PF04363.12 ORF26277 - 4e-46 155.0 7.4 6.1e-46 154.4 7.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF496) DUF898 PF05987.13 ORF24366 - 0.1 11.6 0.8 0.78 8.7 0.8 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF898) MFS_1 PF07690.16 ORF24366 - 0.13 11.2 4.1 0.16 10.8 4.1 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily FAM196 PF15265.6 ORF22264 - 0.043 13.3 0.1 0.059 12.9 0.1 1.2 1 0 0 1 1 1 0 FAM196 family DUF1181 PF06680.11 ORF21698 - 0.06 13.2 0.3 0.093 12.6 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1181) DUF2630 PF10944.8 ORF20405 - 0.19 12.2 1.0 0.29 11.6 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) Phage_tail_APC PF16778.5 ORF17978 - 0.084 12.8 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein VGLL4 PF15245.6 ORF17802 - 0.012 15.8 0.3 0.015 15.4 0.3 1.1 1 0 0 1 1 1 0 Transcription cofactor vestigial-like protein 4 SGS PF05002.15 ORF17352 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain DUF5363 PF17320.2 ORF16420 - 0.22 11.4 3.6 1.9 8.4 0.5 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5363) DUF5344 PF17279.2 ORF152567 - 0.011 16.4 10.6 0.44 11.2 2.3 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5344) YusW PF14039.6 ORF152567 - 0.39 11.3 8.2 0.17 12.4 3.2 2.0 1 1 1 2 2 2 0 YusW-like protein DUF4665 PF15679.5 ORF152567 - 6.8 7.4 14.6 0.55 10.9 3.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4665) Laminin_G_3 PF13385.6 ORF151601 - 0.026 14.7 0.0 0.031 14.4 0.0 1.3 1 0 0 1 1 1 0 Concanavalin A-like lectin/glucanases superfamily UPF0561 PF10573.9 ORF151484 - 0.035 14.2 1.4 0.044 13.9 1.4 1.3 1 1 0 1 1 1 0 Uncharacterised protein family UPF0561 DUF2177 PF09945.9 ORF15087 - 0.014 15.5 1.6 0.02 15.0 1.6 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2177) PHA_synth_III_E PF09712.10 ORF149395 - 0.015 14.4 0.5 0.019 14.1 0.5 1.1 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) LETM1 PF07766.13 ORF149395 - 0.029 13.7 2.8 0.038 13.3 2.8 1.2 1 0 0 1 1 1 0 LETM1-like protein MitMem_reg PF13012.6 ORF149395 - 0.057 13.8 0.4 0.083 13.3 0.4 1.2 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function LMBR1 PF04791.16 ORF149395 - 0.97 8.3 3.2 1.1 8.1 3.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein SGS PF05002.15 ORF148964 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain Phage_tail_APC PF16778.5 ORF147861 - 0.084 12.8 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein MyTH4 PF00784.17 ORF144240 - 0.11 13.0 10.8 0.7 10.4 0.5 3.0 3 0 0 3 3 3 0 MyTH4 domain MRP-L47 PF06984.13 ORF144202 - 9.1e-24 83.4 0.7 1.2e-23 83.1 0.7 1.2 1 0 0 1 1 1 1 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) Ribosomal_L29 PF00831.23 ORF144202 - 1.2e-05 25.1 0.3 3.9e-05 23.5 0.3 1.9 1 1 0 1 1 1 1 Ribosomal L29 protein US10 PF17617.2 ORF143994 - 0.35 10.9 1.9 0.59 10.2 1.9 1.3 1 0 0 1 1 1 0 Viral unique short region 10 Asp PF00026.23 ORF143545 - 4.8e-05 22.9 0.0 5.9e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease ABC_tran PF00005.27 ORF143203 - 5.7e-08 33.4 0.0 8.1e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF143203 - 2.5e-05 23.9 0.0 3.2e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF143203 - 0.0061 16.4 0.0 0.0085 15.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF4132 PF13569.6 ORF143203 - 0.11 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4132) SbcCD_C PF13558.6 ORF143203 - 0.22 11.8 1.5 0.9 9.8 1.5 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit BT1 PF03092.16 ORF142886 - 0.042 12.1 0.2 0.048 11.9 0.2 1.1 1 0 0 1 1 1 0 BT1 family CD45 PF12567.8 ORF142819 - 0.25 11.3 1.1 2.4 8.2 0.4 2.2 2 0 0 2 2 2 0 Leukocyte receptor CD45 SGS PF05002.15 ORF142512 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain CDC24_OB3 PF17244.2 ORF14247 - 0.01 15.6 1.6 0.011 15.4 1.6 1.2 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Spc7 PF08317.11 ORF14247 - 0.011 14.6 15.7 0.013 14.4 15.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF3450 PF11932.8 ORF14247 - 0.037 13.3 10.5 0.05 12.9 10.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) AAA_13 PF13166.6 ORF14247 - 0.049 12.3 11.0 0.061 12.0 11.0 1.0 1 0 0 1 1 1 0 AAA domain HMMR_C PF15908.5 ORF14247 - 0.054 13.8 8.0 0.085 13.1 8.0 1.3 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal HeLo PF14479.6 ORF14247 - 0.073 12.9 4.9 0.082 12.7 4.9 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation DUF4618 PF15397.6 ORF14247 - 0.09 12.2 13.8 0.12 11.8 13.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Methyltrans_Mon PF14314.6 ORF14247 - 0.094 10.7 4.4 0.1 10.6 4.4 1.0 1 0 0 1 1 1 0 Virus-capping methyltransferase AdoHcyase_NAD PF00670.21 ORF14247 - 0.094 12.8 0.7 0.11 12.5 0.7 1.1 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DUF745 PF05335.13 ORF14247 - 0.1 12.3 11.2 0.047 13.4 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Pox_A_type_inc PF04508.12 ORF14247 - 0.1 12.5 0.0 0.1 12.5 0.0 3.0 4 0 0 4 4 3 0 Viral A-type inclusion protein repeat Seryl_tRNA_N PF02403.22 ORF14247 - 0.18 12.0 15.4 0.045 14.0 7.3 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain JIP_LZII PF16471.5 ORF14247 - 0.2 11.8 17.2 0.94 9.7 0.8 3.2 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II BRE1 PF08647.11 ORF14247 - 0.27 11.4 16.1 0.29 11.2 7.9 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase DUF5082 PF16888.5 ORF14247 - 0.3 11.3 14.1 0.62 10.4 14.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) DUF724 PF05266.14 ORF14247 - 0.31 10.9 15.5 1.9 8.3 7.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) PIN_8 PF18476.1 ORF14247 - 0.33 10.8 6.5 0.44 10.4 6.5 1.2 1 0 0 1 1 1 0 PIN like domain AI-2E_transport PF01594.16 ORF14247 - 0.51 9.4 1.0 0.54 9.3 1.0 1.2 1 0 0 1 1 1 0 AI-2E family transporter CENP-F_leu_zip PF10473.9 ORF14247 - 0.54 10.3 21.1 0.67 10.0 7.1 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Prominin PF05478.11 ORF14247 - 0.55 8.1 7.9 0.6 8.0 7.9 1.1 1 0 0 1 1 1 0 Prominin Exonuc_VII_L PF02601.15 ORF14247 - 0.59 9.6 7.4 0.69 9.4 7.4 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF1664 PF07889.12 ORF14247 - 0.95 9.5 12.2 1.7 8.7 6.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) HU-CCDC81_bac_2 PF18175.1 ORF14247 - 1.2 9.1 4.8 8.4 6.4 0.1 2.8 2 1 1 3 3 3 0 CCDC81-like prokaryotic HU domain 2 Tup_N PF08581.10 ORF14247 - 1.2 9.5 10.4 0.54 10.6 6.1 2.1 1 1 1 2 2 2 0 Tup N-terminal Dna2 PF08696.11 ORF14247 - 1.3 8.7 9.0 0.23 11.3 4.9 1.6 1 1 1 2 2 2 0 DNA replication factor Dna2 DUF4407 PF14362.6 ORF14247 - 1.7 8.0 7.4 2.5 7.4 7.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 ORF14247 - 1.7 8.5 14.0 13 5.7 6.0 3.3 1 1 1 2 2 2 0 Septum formation initiator APG6_N PF17675.1 ORF14247 - 1.7 9.2 17.8 9.6 6.7 5.1 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region SlyX PF04102.12 ORF14247 - 2.7 8.7 13.3 2.6 8.7 2.7 2.7 1 1 1 2 2 2 0 SlyX TMPIT PF07851.13 ORF14247 - 3.3 6.9 12.3 75 2.4 12.3 2.0 1 1 0 1 1 1 0 TMPIT-like protein UPF0242 PF06785.11 ORF14247 - 4 7.5 15.9 14 5.7 15.9 1.8 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus HSCB_C PF07743.13 ORF14247 - 5.2 7.6 10.8 49 4.5 0.2 3.0 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain FAM76 PF16046.5 ORF14247 - 5.2 6.3 13.5 1.8 7.9 9.6 1.8 1 1 1 2 2 2 0 FAM76 protein FliD_N PF02465.18 ORF14247 - 6.3 7.6 10.8 4.3 8.1 3.9 2.2 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus RecG_N PF17190.4 ORF14247 - 6.4 7.6 10.1 23 5.8 6.5 2.3 1 1 1 2 2 2 0 RecG N-terminal helical domain DUF1515 PF07439.11 ORF14247 - 6.4 6.8 7.7 2.1 8.4 1.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) bZIP_2 PF07716.15 ORF14247 - 8.2 6.6 11.7 12 6.1 0.3 3.5 3 1 1 4 4 4 0 Basic region leucine zipper EF-hand_7 PF13499.6 ORF142374 - 6.2e-07 29.8 1.9 1e-06 29.1 1.9 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF142374 - 1.1e-06 28.0 3.7 0.00036 20.2 0.4 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF142374 - 2.1e-06 27.0 0.1 8.2e-06 25.1 0.2 2.1 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF142374 - 0.00016 21.0 4.1 0.0015 17.9 0.3 2.5 2 0 0 2 2 2 1 EF hand MRP-S26 PF14943.6 ORF142374 - 0.00077 19.4 2.0 0.00077 19.4 2.0 1.4 2 0 0 2 2 2 1 Mitochondrial ribosome subunit S26 EF-hand_8 PF13833.6 ORF142374 - 0.0033 17.2 1.1 0.021 14.7 0.2 2.2 1 1 1 2 2 2 1 EF-hand domain pair # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks199.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks199.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks199.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks199.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RVT_1 PF00078.27 ORF61113 - 2.1e-21 76.5 0.0 7.2e-21 74.7 0.0 1.8 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) MORN PF02493.20 ORF57309 - 1.6e-13 49.7 43.0 2.8e-07 30.0 3.2 7.7 7 1 0 7 7 7 4 MORN repeat DUF3048_C PF17479.2 ORF57309 - 0.52 10.7 11.6 5.4 7.5 0.5 4.0 2 1 3 5 5 5 0 Protein of unknown function (DUF3048) C-terminal domain Tyrosinase PF00264.20 ORF54792 - 2e-19 70.8 13.2 1e-18 68.5 13.2 2.1 1 1 0 1 1 1 1 Common central domain of tyrosinase Kelch_1 PF01344.25 ORF51864 - 1.1e-18 66.5 8.4 5.5e-08 32.3 0.0 6.1 7 1 0 7 7 7 3 Kelch motif Kelch_6 PF13964.6 ORF51864 - 4.6e-14 52.1 2.7 0.054 13.8 0.0 6.1 3 2 3 6 6 6 3 Kelch motif Kelch_2 PF07646.15 ORF51864 - 8.1e-10 38.3 0.9 0.088 12.8 0.3 4.4 4 1 0 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF51864 - 1.6e-09 37.8 0.0 0.097 13.0 0.0 4.6 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF51864 - 5.4e-07 29.5 0.2 0.097 12.7 0.0 4.0 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF51864 - 1.3e-05 25.1 0.2 0.003 17.5 0.0 3.4 4 0 0 4 4 3 1 Kelch motif Velvet PF11754.8 ORF51864 - 0.07 13.1 6.6 0.11 12.4 6.6 1.3 1 0 0 1 1 1 0 Velvet factor MMU163 PF17119.5 ORF51864 - 0.39 9.8 7.3 0.62 9.2 7.3 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis Presenilin PF01080.17 ORF51864 - 0.45 9.2 7.8 0.64 8.7 7.8 1.2 1 0 0 1 1 1 0 Presenilin Ycf34 PF10718.9 ORF51864 - 1.3 9.8 0.0 1.3 9.8 0.0 3.4 3 0 0 3 3 3 0 Hypothetical chloroplast protein Ycf34 BUD22 PF09073.10 ORF51864 - 1.4 8.1 17.5 2 7.7 17.5 1.1 1 0 0 1 1 1 0 BUD22 TFIIA PF03153.13 ORF51864 - 3.5 7.5 22.8 5 7.0 22.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit AMP-binding PF00501.28 ORF44803 - 1.5e-66 224.8 0.0 1.9e-66 224.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF44803 - 3.2e-15 56.9 0.0 5.9e-15 56.0 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain YL1 PF05764.13 ORF41051 - 3.3e-20 73.2 36.2 3.3e-20 73.2 36.2 3.5 2 1 1 3 3 3 1 YL1 nuclear protein YL1_C PF08265.11 ORF41051 - 2e-11 43.4 0.0 3.6e-11 42.6 0.0 1.4 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain MORN PF02493.20 ORF34711 - 1.1e-11 43.9 34.0 0.00035 20.3 0.8 6.2 6 0 0 6 6 6 4 MORN repeat RCC1_2 PF13540.6 ORF33526 - 7.2e-25 86.2 15.1 0.014 15.2 0.9 9.5 9 0 0 9 9 9 9 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF33526 - 1.4e-05 25.3 5.5 1.7 8.7 0.1 6.8 4 2 1 5 5 5 2 Uncharacterised ACR, YagE family COG1723 Ago_hook PF10427.9 ORF33526 - 0.04 14.5 5.9 0.19 12.3 0.5 3.1 2 2 1 3 3 3 0 Argonaute hook Capsule_synth PF05159.14 ORF33526 - 0.097 12.1 0.1 16 4.8 0.0 3.5 4 0 0 4 4 4 0 Capsule polysaccharide biosynthesis protein MORN PF02493.20 ORF30976 - 1.8e-12 46.3 41.8 2.4e-06 27.1 3.4 7.6 7 0 0 7 7 7 4 MORN repeat Pkinase PF00069.25 ORF27213 - 4e-27 95.2 0.0 5.7e-27 94.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF27213 - 5.5e-13 48.8 0.0 8e-13 48.3 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase FHA PF00498.26 ORF27213 - 1.3e-12 47.8 0.0 1.2e-11 44.8 0.0 2.5 3 0 0 3 3 3 1 FHA domain Pkinase_fungal PF17667.1 ORF27213 - 1e-11 44.3 0.0 1.5e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF27213 - 0.00036 19.9 0.0 0.00059 19.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF27213 - 0.00083 19.4 0.0 0.0044 17.0 0.0 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Yop-YscD_cpl PF16697.5 ORF27213 - 0.0015 18.8 0.0 0.0038 17.5 0.0 1.6 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Choline_kinase PF01633.20 ORF27213 - 0.15 11.7 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Pkinase PF00069.25 ORF25035 - 4e-27 95.2 0.0 5.7e-27 94.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF25035 - 5.5e-13 48.8 0.0 8e-13 48.3 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase FHA PF00498.26 ORF25035 - 1.3e-12 47.8 0.0 1.2e-11 44.8 0.0 2.5 3 0 0 3 3 3 1 FHA domain Pkinase_fungal PF17667.1 ORF25035 - 1e-11 44.3 0.0 1.5e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF25035 - 0.00036 19.9 0.0 0.00059 19.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF25035 - 0.00083 19.4 0.0 0.0044 17.0 0.0 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Yop-YscD_cpl PF16697.5 ORF25035 - 0.0015 18.8 0.0 0.0038 17.5 0.0 1.6 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Choline_kinase PF01633.20 ORF25035 - 0.15 11.7 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase p450 PF00067.22 ORF17824 - 1.7e-45 155.7 0.0 3.6e-45 154.6 0.0 1.5 1 1 0 1 1 1 1 Cytochrome P450 MORN PF02493.20 ORF148405 - 1.7e-08 33.8 36.5 1.7e-05 24.4 0.3 6.8 7 0 0 7 7 7 4 MORN repeat JHY PF15261.6 ORF146129 - 9.6e-17 61.9 9.6 9.6e-17 61.9 9.6 3.9 4 1 0 4 4 4 1 Jhy protein HA2 PF04408.23 ORF136605 - 0.079 13.3 0.3 0.18 12.1 0.3 1.6 1 0 0 1 1 1 0 Helicase associated domain (HA2) Claudin_2 PF13903.6 ORF136605 - 2 8.1 9.8 0.75 9.5 0.7 3.0 2 2 1 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction EOS1 PF12326.8 ORF136605 - 4.9 7.1 6.6 0.21 11.5 0.3 2.1 2 0 0 2 2 2 0 N-glycosylation protein Kelch_1 PF01344.25 ORF135239 - 1.1e-18 66.5 8.4 5.5e-08 32.3 0.0 6.1 7 1 0 7 7 7 3 Kelch motif Kelch_6 PF13964.6 ORF135239 - 4.6e-14 52.1 2.7 0.054 13.8 0.0 6.1 3 2 3 6 6 6 3 Kelch motif Kelch_2 PF07646.15 ORF135239 - 8.1e-10 38.3 0.9 0.088 12.8 0.3 4.4 4 1 0 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF135239 - 1.6e-09 37.8 0.0 0.097 13.0 0.0 4.6 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF135239 - 5.4e-07 29.5 0.2 0.097 12.7 0.0 4.0 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF135239 - 1.3e-05 25.1 0.2 0.003 17.5 0.0 3.4 4 0 0 4 4 3 1 Kelch motif Velvet PF11754.8 ORF135239 - 0.07 13.1 6.6 0.11 12.4 6.6 1.3 1 0 0 1 1 1 0 Velvet factor MMU163 PF17119.5 ORF135239 - 0.39 9.8 7.3 0.62 9.2 7.3 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis Presenilin PF01080.17 ORF135239 - 0.45 9.2 7.8 0.64 8.7 7.8 1.2 1 0 0 1 1 1 0 Presenilin Ycf34 PF10718.9 ORF135239 - 1.3 9.8 0.0 1.3 9.8 0.0 3.4 3 0 0 3 3 3 0 Hypothetical chloroplast protein Ycf34 BUD22 PF09073.10 ORF135239 - 1.4 8.1 17.5 2 7.7 17.5 1.1 1 0 0 1 1 1 0 BUD22 TFIIA PF03153.13 ORF135239 - 3.5 7.5 22.8 5 7.0 22.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Kelch_1 PF01344.25 ORF126378 - 1.1e-18 66.5 8.4 5.5e-08 32.3 0.0 6.1 7 1 0 7 7 7 3 Kelch motif Kelch_6 PF13964.6 ORF126378 - 4.6e-14 52.1 2.7 0.054 13.8 0.0 6.1 3 2 3 6 6 6 3 Kelch motif Kelch_2 PF07646.15 ORF126378 - 8.1e-10 38.3 0.9 0.088 12.8 0.3 4.4 4 1 0 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF126378 - 1.6e-09 37.8 0.0 0.097 13.0 0.0 4.6 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF126378 - 5.4e-07 29.5 0.2 0.097 12.7 0.0 4.0 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF126378 - 1.3e-05 25.1 0.2 0.003 17.5 0.0 3.4 4 0 0 4 4 3 1 Kelch motif Velvet PF11754.8 ORF126378 - 0.07 13.1 6.6 0.11 12.4 6.6 1.3 1 0 0 1 1 1 0 Velvet factor MMU163 PF17119.5 ORF126378 - 0.39 9.8 7.3 0.62 9.2 7.3 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis Presenilin PF01080.17 ORF126378 - 0.45 9.2 7.8 0.64 8.7 7.8 1.2 1 0 0 1 1 1 0 Presenilin Ycf34 PF10718.9 ORF126378 - 1.3 9.8 0.0 1.3 9.8 0.0 3.4 3 0 0 3 3 3 0 Hypothetical chloroplast protein Ycf34 BUD22 PF09073.10 ORF126378 - 1.4 8.1 17.5 2 7.7 17.5 1.1 1 0 0 1 1 1 0 BUD22 TFIIA PF03153.13 ORF126378 - 3.5 7.5 22.8 5 7.0 22.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit MORN PF02493.20 ORF11731 - 3.4e-10 39.2 43.9 1.1e-06 28.1 2.7 7.8 8 0 0 8 8 8 5 MORN repeat MORN PF02493.20 ORF116830 - 8.9e-16 56.8 40.5 5.9e-07 29.0 4.7 7.7 7 0 0 7 7 7 4 MORN repeat MORN PF02493.20 ORF108148 - 6e-11 41.6 36.3 0.00035 20.3 0.8 6.3 6 0 0 6 6 6 4 MORN repeat JHY PF15261.6 ORF100672 - 9.6e-17 61.9 9.6 9.6e-17 61.9 9.6 3.9 4 1 0 4 4 4 1 Jhy protein MFS_1 PF07690.16 ORF98336 - 2.1e-13 49.9 13.0 7.1e-11 41.6 2.8 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF98336 - 1.7e-12 46.9 17.5 4.7e-12 45.5 6.5 2.3 1 1 1 2 2 2 2 Sugar (and other) transporter Nucleotid_trans PF03407.16 ORF93438 - 8.6e-06 25.9 0.0 1.3e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Nucleotide-diphospho-sugar transferase ThiF PF00899.21 ORF74414 - 1e-20 74.2 0.0 1.9e-20 73.3 0.0 1.5 1 1 0 1 1 1 1 ThiF family E1_4HB PF16191.5 ORF74414 - 9.2e-08 32.2 0.2 0.13 12.4 0.1 3.4 3 0 0 3 3 3 3 Ubiquitin-activating enzyme E1 four-helix bundle DUF4972 PF16342.5 ORF74414 - 0.025 14.3 0.4 0.098 12.3 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4972) DUF3837 PF12939.7 ORF74414 - 0.35 11.3 3.8 0.49 10.8 0.2 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) MAS20 PF02064.15 ORF74414 - 0.58 10.3 3.5 4.4 7.4 0.1 2.3 2 0 0 2 2 2 0 MAS20 protein import receptor DEAD PF00270.29 ORF60843 - 2.2e-20 73.1 0.0 4.7e-20 72.1 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase R3H PF01424.22 ORF60843 - 2.9e-05 24.0 0.0 8.7e-05 22.4 0.0 1.8 1 0 0 1 1 1 1 R3H domain Helicase_C PF00271.31 ORF60843 - 0.0011 19.3 0.0 0.0028 18.0 0.0 1.8 1 1 0 1 1 1 1 Helicase conserved C-terminal domain mTERF PF02536.14 ORF60635 - 9.4e-44 149.6 0.0 3.1e-25 88.8 0.0 2.1 1 1 1 2 2 2 2 mTERF TAL_effector PF03377.13 ORF60635 - 0.00017 21.8 0.2 29 5.1 0.0 5.0 5 0 0 5 5 5 2 TAL effector repeat ERbeta_N PF12497.8 ORF60635 - 0.012 15.4 0.0 22 4.9 0.0 4.4 6 0 0 6 6 6 0 Estrogen receptor beta PI_PP_I PF18363.1 ORF60635 - 0.079 13.1 0.0 4.6 7.5 0.0 3.4 3 0 0 3 3 3 0 Phosphoinositide phosphatase insertion domain GAF PF01590.26 ORF44852 - 1.6e-24 87.0 0.1 2.2e-16 60.7 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 ORF44852 - 7.8e-21 74.8 0.0 1.1e-13 51.7 0.0 2.8 2 1 0 2 2 2 2 GAF domain GAF_3 PF13492.6 ORF44852 - 3.2e-15 56.6 0.0 4e-09 36.9 0.0 2.9 3 0 0 3 3 3 2 GAF domain C2 PF00168.30 ORF44852 - 1.2e-07 31.9 0.0 1e-06 29.0 0.0 2.5 2 1 0 2 2 2 1 C2 domain SpoVT_C PF15714.5 ORF44852 - 0.0049 16.9 0.1 0.14 12.2 0.0 2.5 2 0 0 2 2 2 1 Stage V sporulation protein T C-terminal, transcription factor ACR_tran PF00873.19 ORF37198 - 7.2e-173 576.8 6.3 8.1e-173 576.7 6.3 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Man-6-P_recep PF02157.15 ORF37198 - 0.082 12.0 0.8 0.16 11.0 0.8 1.5 1 0 0 1 1 1 0 Mannose-6-phosphate receptor SHIPPO-rpt PF07004.12 ORF28674 - 5.4e-15 55.5 40.5 0.017 16.0 2.1 11.3 11 0 0 11 11 11 9 Sperm-tail PG-rich repeat PHD_2 PF13831.6 ORF17690 - 0.016 14.7 2.3 0.039 13.5 2.3 1.6 1 0 0 1 1 1 0 PHD-finger PHD PF00628.29 ORF17690 - 0.033 14.1 4.7 0.079 12.9 4.7 1.7 1 0 0 1 1 1 0 PHD-finger TRAP-gamma PF07074.12 ORF17690 - 1.6 8.3 10.3 2.2 7.8 5.6 2.5 1 1 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) zf-B_box PF00643.24 ORF17690 - 6.5 7.0 16.8 0.099 12.8 9.1 1.9 2 0 0 2 2 2 0 B-box zinc finger ABC_tran PF00005.27 ORF14509 - 4.5e-27 95.2 0.1 4.5e-27 95.2 0.1 2.4 3 0 0 3 3 3 1 ABC transporter RsgA_GTPase PF03193.16 ORF14509 - 0.028 14.3 0.0 0.061 13.2 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 ORF14509 - 0.16 11.7 0.2 0.44 10.3 0.2 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 ORF14509 - 0.21 11.8 1.1 0.45 10.7 1.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 ORF14509 - 0.79 9.5 0.0 0.79 9.5 0.0 3.5 4 1 0 4 4 4 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 ORF14509 - 0.83 10.2 4.6 2.2 8.8 0.2 3.1 3 0 0 3 3 3 0 AAA domain DUF1040 PF06288.13 ORF125730 - 0.19 12.1 2.1 0.63 10.5 2.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1040) NPV_P10 PF05531.12 ORF125730 - 0.23 11.9 5.7 8.5 6.9 0.2 3.4 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF641 PF04859.12 ORF125730 - 0.38 11.1 12.5 0.12 12.7 6.1 2.6 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) AAA_23 PF13476.6 ORF125730 - 0.55 10.7 12.0 9.7 6.6 0.1 2.4 2 0 0 2 2 2 0 AAA domain Glu-tRNAGln PF02686.15 ORF125730 - 1.7 9.0 4.7 0.72 10.2 0.7 2.5 2 0 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit Prefoldin_2 PF01920.20 ORF125730 - 1.7 8.6 20.4 13 5.8 0.6 3.8 3 1 0 3 3 3 0 Prefoldin subunit FapA PF03961.13 ORF125730 - 1.9 7.0 13.5 0.64 8.6 9.4 1.9 2 0 0 2 2 2 0 Flagellar Assembly Protein A Spc7 PF08317.11 ORF125730 - 4.6 6.0 18.6 1.5 7.6 12.0 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein FlaC_arch PF05377.11 ORF125730 - 4.9 7.6 6.9 33 5.0 0.4 3.3 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) DUF16 PF01519.16 ORF125730 - 7.3 7.1 11.6 1.7 9.2 6.0 2.4 2 0 0 2 2 2 0 Protein of unknown function DUF16 Seryl_tRNA_N PF02403.22 ORF125730 - 8.1 6.7 21.2 4 7.7 2.7 3.7 3 0 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain SBP_bac_5 PF00496.22 ORF117999 - 1.9e-92 310.1 1.9 2.4e-92 309.8 1.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Tenui_NS4 PF03300.13 ORF117999 - 0.15 11.5 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 Tenuivirus non-structural, movement protein NS4 TauE PF01925.19 ORF111778 - 4.9e-28 98.4 28.6 4.1e-14 52.8 0.2 3.0 3 0 0 3 3 3 2 Sulfite exporter TauE/SafE DUF2207 PF09972.9 ORF111778 - 8.1e-05 21.6 0.4 8.1e-05 21.6 0.4 4.1 2 2 1 3 3 1 1 Predicted membrane protein (DUF2207) DUF4407 PF14362.6 ORF111778 - 0.0019 17.6 0.0 0.0043 16.5 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Macoilin PF09726.9 ORF111778 - 0.012 14.2 5.3 0.016 13.8 5.3 1.1 1 0 0 1 1 1 0 Macoilin family LAP1C PF05609.12 ORF111778 - 0.023 13.8 10.6 0.034 13.2 10.6 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) TMEM51 PF15345.6 ORF111778 - 0.024 14.5 6.8 0.051 13.4 6.8 1.5 1 0 0 1 1 1 0 Transmembrane protein 51 COX14 PF14880.6 ORF111778 - 0.12 12.3 1.0 0.74 9.7 0.0 2.8 3 0 0 3 3 3 0 Cytochrome oxidase c assembly Asp-B-Hydro_N PF05279.11 ORF111778 - 0.76 9.8 18.9 1.1 9.2 18.9 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region GAGA_bind PF06217.12 ORF111778 - 1 9.6 7.7 1.5 9.1 7.7 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family CDC45 PF02724.14 ORF111778 - 1.8 6.8 17.4 2.5 6.3 17.4 1.1 1 0 0 1 1 1 0 CDC45-like protein Podoplanin PF05808.11 ORF111778 - 4.3 7.4 4.7 96 3.0 0.0 2.8 2 0 0 2 2 2 0 Podoplanin UDPGP PF01704.18 ORF110760 - 1.1e-63 215.4 0.0 6e-62 209.6 0.0 2.1 1 1 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase Glyco_transf_5 PF08323.11 ORF110760 - 1.4e-45 155.9 0.1 2.1e-45 155.3 0.1 1.2 1 0 0 1 1 1 1 Starch synthase catalytic domain 4HBT PF03061.22 ORF109671 - 1.3e-08 35.1 0.5 7.1e-08 32.7 0.5 2.2 1 1 0 1 1 1 1 Thioesterase superfamily START PF01852.19 ORF109671 - 2.8e-06 26.9 0.0 5.1e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 START domain UDPGP PF01704.18 ORF104814 - 1.1e-63 215.4 0.0 6e-62 209.6 0.0 2.1 1 1 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase Glyco_transf_5 PF08323.11 ORF104814 - 1.4e-45 155.9 0.1 2.1e-45 155.3 0.1 1.2 1 0 0 1 1 1 1 Starch synthase catalytic domain MFS_1 PF07690.16 ORF10451 - 1.7e-28 99.6 29.7 1.2e-27 96.8 23.2 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF10451 - 1.1e-13 50.8 27.3 1.6e-07 30.6 15.9 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 ORF10451 - 0.00025 20.0 9.4 0.00025 20.0 9.4 3.1 1 1 1 2 2 2 1 MFS_1 like family OSTbeta PF15048.6 ORF10451 - 0.095 12.8 0.8 0.93 9.6 0.3 2.5 2 0 0 2 2 2 0 Organic solute transporter subunit beta protein DUF4231 PF14015.6 ORF10451 - 0.57 10.7 0.0 0.57 10.7 0.0 2.8 4 0 0 4 4 4 0 Protein of unknown function (DUF4231) LapA_dom PF06305.11 ORF10451 - 2.2 8.1 9.5 3.3 7.6 0.3 3.6 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain ETRAMP PF09716.10 ORF10451 - 6.8 6.8 10.6 3.7 7.7 3.4 3.4 3 0 0 3 3 3 0 Malarial early transcribed membrane protein (ETRAMP) p450 PF00067.22 ORF91742 - 2e-49 168.6 1.4 3.1e-49 168.0 1.4 1.3 1 0 0 1 1 1 1 Cytochrome P450 TIR_2 PF13676.6 ORF77240 - 0.0059 17.2 0.0 0.011 16.3 0.0 1.4 1 0 0 1 1 1 1 TIR domain HET PF06985.11 ORF77240 - 0.015 15.7 1.3 0.048 14.0 1.3 1.7 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) HSP70 PF00012.20 ORF71625 - 5.2e-12 44.8 8.2 5.2e-12 44.8 8.2 3.4 2 1 0 2 2 2 1 Hsp70 protein MGDG_synth PF06925.11 ORF64610 - 1.3e-27 97.0 0.1 1.9e-27 96.4 0.1 1.3 1 0 0 1 1 1 1 Monogalactosyldiacylglycerol (MGDG) synthase Glyco_tran_28_C PF04101.16 ORF64610 - 1.6e-13 50.9 0.1 1.6e-13 50.9 0.1 2.0 3 0 0 3 3 3 1 Glycosyltransferase family 28 C-terminal domain Glycos_transf_1 PF00534.20 ORF64610 - 1.2e-06 28.2 0.0 3e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF64610 - 2e-06 28.3 0.1 4.6e-06 27.1 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 ORF64610 - 0.002 17.0 0.0 0.085 11.7 0.0 2.4 2 1 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_4 PF13439.6 ORF64610 - 0.0055 16.7 1.9 0.019 15.0 0.8 2.6 3 1 0 3 3 3 1 Glycosyltransferase Family 4 Ion_trans_2 PF07885.16 ORF60622 - 1.6e-09 37.6 4.0 7.3e-09 35.5 4.0 2.2 1 0 0 1 1 1 1 Ion channel cNMP_binding PF00027.29 ORF60622 - 2e-08 34.2 0.0 4e-08 33.2 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF4188 PF13826.6 ORF60622 - 0.072 13.4 0.2 0.15 12.4 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4188) MGDG_synth PF06925.11 ORF5600 - 1.3e-27 97.0 0.1 1.9e-27 96.4 0.1 1.3 1 0 0 1 1 1 1 Monogalactosyldiacylglycerol (MGDG) synthase Glyco_tran_28_C PF04101.16 ORF5600 - 1.6e-13 50.9 0.1 1.6e-13 50.9 0.1 2.0 3 0 0 3 3 3 1 Glycosyltransferase family 28 C-terminal domain Glycos_transf_1 PF00534.20 ORF5600 - 1.2e-06 28.2 0.0 3e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF5600 - 2e-06 28.3 0.1 4.6e-06 27.1 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 ORF5600 - 0.002 17.0 0.0 0.085 11.7 0.0 2.4 2 1 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_4 PF13439.6 ORF5600 - 0.0055 16.7 1.9 0.019 15.0 0.8 2.6 3 1 0 3 3 3 1 Glycosyltransferase Family 4 UVR PF02151.19 ORF142943 - 0.021 14.6 1.9 0.021 14.6 1.9 2.7 2 0 0 2 2 2 0 UvrB/uvrC motif CCAP PF11105.8 ORF133893 - 0.022 14.7 0.7 0.022 14.7 0.7 2.1 2 0 0 2 2 2 0 Arthropod cardioacceleratory peptide 2a p450 PF00067.22 ORF120973 - 3.5e-49 167.8 0.5 4.7e-49 167.4 0.5 1.1 1 0 0 1 1 1 1 Cytochrome P450 USP8_dimer PF08969.11 ORF120973 - 0.11 12.7 2.5 0.12 12.6 0.2 2.2 2 0 0 2 2 2 0 USP8 dimerisation domain Synaptonemal_3 PF15191.6 ORF91873 - 0.017 14.8 0.7 0.11 12.3 0.1 2.5 2 0 0 2 2 2 0 Synaptonemal complex central element protein 3 p450 PF00067.22 ORF84662 - 1.5e-41 142.7 0.6 2.1e-41 142.1 0.6 1.3 1 0 0 1 1 1 1 Cytochrome P450 Na_Ca_ex PF01699.24 ORF59745 - 1.1e-11 45.0 27.5 6.5e-06 26.2 7.8 2.4 2 1 0 2 2 2 2 Sodium/calcium exchanger protein DUF4298 PF14131.6 ORF59745 - 0.097 12.6 2.5 0.092 12.7 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) Beta-lactamase PF00144.24 ORF31241 - 1.1e-21 77.4 0.1 2.1e-21 76.5 0.1 1.5 1 0 0 1 1 1 1 Beta-lactamase p450 PF00067.22 ORF23174 - 1.5e-57 195.4 1.1 7.8e-57 193.0 0.1 2.0 2 0 0 2 2 2 1 Cytochrome P450 Ubiq_cyt_C_chap PF03981.12 ORF23174 - 0.088 12.9 0.0 0.19 11.8 0.0 1.6 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone Paz_1 PF18349.1 ORF128695 - 0.79 9.7 10.8 8.3 6.4 0.1 3.8 2 1 0 4 4 4 0 PAZ domain EF-hand_7 PF13499.6 ORF128309 - 1.8e-11 44.3 14.5 4.5e-10 39.8 1.9 3.6 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF128309 - 1.7e-09 36.8 16.9 7.4e-05 22.4 0.2 5.0 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF128309 - 1.3e-07 30.6 18.8 0.00039 19.8 0.6 5.1 5 1 0 5 5 5 2 EF hand EF-hand_8 PF13833.6 ORF128309 - 3.6e-07 29.9 13.2 0.0063 16.3 0.2 4.7 5 0 0 5 5 5 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF128309 - 0.034 13.6 0.0 0.034 13.6 0.0 4.1 6 0 0 6 6 6 0 EF hand EF-hand_11 PF08976.11 ORF128309 - 0.082 13.8 1.7 3.2 8.7 0.1 3.2 2 1 0 3 3 3 0 EF-hand domain Caleosin PF05042.13 ORF128309 - 0.57 10.1 4.6 36 4.2 0.1 3.7 2 1 2 4 4 4 0 Caleosin related protein DUF4169 PF13770.6 ORF114024 - 0.078 13.3 0.4 0.13 12.5 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4169) DUF4500 PF14937.6 ORF114024 - 2.7 8.1 5.9 3.5 7.7 0.0 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF4500) IBR PF01485.21 ORF114024 - 3.9 7.8 6.5 14 6.0 6.5 1.9 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain Aldedh PF00171.22 ORF91546 - 1.4e-70 238.2 0.0 2e-70 237.6 0.0 1.2 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1433 PF07252.11 ORF91546 - 0.033 14.4 0.1 0.14 12.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1433) Shisa PF13908.6 ORF79398 - 1.7e-06 28.4 1.9 2e-06 28.2 0.3 2.0 2 0 0 2 2 2 1 Wnt and FGF inhibitory regulator TMEM154 PF15102.6 ORF79398 - 2.9e-06 27.2 3.0 4.4e-06 26.7 1.8 1.9 2 0 0 2 2 2 1 TMEM154 protein family Rax2 PF12768.7 ORF79398 - 0.00028 20.4 0.1 0.00077 19.0 0.1 1.7 1 0 0 1 1 1 1 Cortical protein marker for cell polarity DUF1180 PF06679.12 ORF79398 - 0.00053 20.5 0.4 0.001 19.5 0.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1180) TMEM51 PF15345.6 ORF79398 - 0.0024 17.7 0.5 0.0037 17.2 0.5 1.2 1 0 0 1 1 1 1 Transmembrane protein 51 RIFIN PF02009.16 ORF79398 - 0.0044 16.9 0.1 0.0075 16.2 0.1 1.4 1 0 0 1 1 1 1 Rifin PIRT PF15099.6 ORF79398 - 0.0045 16.6 0.7 0.01 15.4 0.7 1.5 1 0 0 1 1 1 1 Phosphoinositide-interacting protein family Peptidase_M56 PF05569.11 ORF79398 - 0.0069 15.6 0.1 0.014 14.6 0.1 1.4 1 0 0 1 1 1 1 BlaR1 peptidase M56 EphA2_TM PF14575.6 ORF79398 - 0.047 14.6 0.3 0.27 12.1 0.1 2.2 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Orf78 PF06024.12 ORF79398 - 0.07 13.4 1.3 0.12 12.7 0.2 1.9 2 0 0 2 2 2 0 Orf78 (ac78) Insulin_TMD PF17870.1 ORF79398 - 0.17 12.0 0.8 0.46 10.6 0.8 1.7 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment GAF PF01590.26 ORF73814 - 1.6e-24 87.0 0.1 2.2e-16 60.7 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 ORF73814 - 6.4e-21 75.1 0.1 1e-13 51.7 0.0 2.9 3 1 0 3 3 3 2 GAF domain GAF_3 PF13492.6 ORF73814 - 3.3e-15 56.6 0.0 4e-09 36.9 0.0 2.9 3 0 0 3 3 3 2 GAF domain C2 PF00168.30 ORF73814 - 1.2e-07 32.0 0.0 1e-06 29.0 0.0 2.5 2 1 0 2 2 2 1 C2 domain SpoVT_C PF15714.5 ORF73814 - 0.0048 16.9 0.1 0.14 12.2 0.0 2.5 2 0 0 2 2 2 1 Stage V sporulation protein T C-terminal, transcription factor DNA_ligase_A_M PF01068.21 ORF69805 - 4.1e-32 111.5 0.8 6.1e-32 110.9 0.8 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_C PF04679.15 ORF69805 - 1.4e-23 83.4 0.0 2.6e-23 82.5 0.0 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region DNA_ligase_A_N PF04675.14 ORF69805 - 4.4e-11 43.4 0.0 1.2e-10 42.0 0.0 1.8 2 0 0 2 2 2 1 DNA ligase N terminus RNA_ligase PF09414.10 ORF69805 - 3e-09 37.4 0.4 5.2e-09 36.6 0.4 1.4 1 0 0 1 1 1 1 RNA ligase mRNA_cap_enzyme PF01331.19 ORF69805 - 0.0026 17.6 1.2 0.018 14.9 0.7 2.4 1 1 1 2 2 2 1 mRNA capping enzyme, catalytic domain DNA_ligase_OB_2 PF14743.6 ORF69805 - 0.14 12.2 0.6 2.5 8.2 0.0 2.8 3 0 0 3 3 3 0 DNA ligase OB-like domain p450 PF00067.22 ORF66517 - 1.8e-50 172.1 1.1 2.7e-50 171.5 1.1 1.2 1 0 0 1 1 1 1 Cytochrome P450 p450 PF00067.22 ORF63894 - 1.8e-44 152.3 0.8 2.6e-44 151.8 0.8 1.2 1 0 0 1 1 1 1 Cytochrome P450 p450 PF00067.22 ORF56844 - 2.2e-42 145.4 0.1 2.6e-42 145.1 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF5442 PF17514.2 ORF56844 - 0.13 12.4 0.1 1.4 9.2 0.0 2.4 1 1 0 2 2 2 0 Family of unknown function (DUF5442) Aldedh PF00171.22 ORF51960 - 1.4e-70 238.2 0.0 2e-70 237.6 0.0 1.2 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1433 PF07252.11 ORF51960 - 0.033 14.4 0.1 0.14 12.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1433) p450 PF00067.22 ORF42538 - 8.5e-54 183.0 0.2 1.2e-53 182.6 0.2 1.2 1 0 0 1 1 1 1 Cytochrome P450 DUF3989 PF13150.6 ORF42538 - 0.75 9.6 2.8 24 4.7 1.5 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3989) p450 PF00067.22 ORF37140 - 2.8e-52 178.0 0.2 3.8e-52 177.6 0.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 p450 PF00067.22 ORF36809 - 3.5e-55 187.6 0.8 5e-55 187.1 0.8 1.1 1 0 0 1 1 1 1 Cytochrome P450 SLATT_5 PF18160.1 ORF36809 - 0.71 9.2 6.0 3.2 7.0 0.8 2.5 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 Pyr_redox_3 PF13738.6 ORF30836 - 2.5e-09 36.8 0.0 2e-07 30.5 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF30836 - 4.3e-08 32.7 0.1 4e-05 23.0 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 ORF30836 - 1.6e-06 26.8 0.1 2.9e-05 22.7 0.0 2.4 2 1 0 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 ORF30836 - 1.5e-05 25.2 0.7 4.3e-05 23.7 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 ORF30836 - 0.0013 19.1 0.0 0.014 15.8 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding Amino_oxidase PF01593.24 ORF30836 - 0.0062 15.9 0.0 0.12 11.6 0.0 2.2 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Thi4 PF01946.17 ORF30836 - 0.0062 15.8 0.1 0.016 14.5 0.0 1.6 2 0 0 2 2 2 1 Thi4 family K_oxygenase PF13434.6 ORF30836 - 0.01 15.0 0.0 0.048 12.8 0.0 2.0 2 1 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 ORF30836 - 0.022 14.3 0.9 0.17 11.5 0.4 2.4 2 0 0 2 2 2 0 FAD dependent oxidoreductase Shikimate_DH PF01488.20 ORF30836 - 0.055 13.5 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase FAD_oxidored PF12831.7 ORF30836 - 0.065 12.6 0.2 0.11 11.8 0.2 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF30836 - 0.065 12.5 0.1 2 7.6 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.22 ORF30836 - 0.07 12.2 0.2 12 4.8 0.0 2.4 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_binding_2 PF00890.24 ORF30836 - 0.075 12.1 0.2 0.14 11.2 0.2 1.4 1 0 0 1 1 1 0 FAD binding domain Amidase PF01425.21 ORF27137 - 1.2e-72 245.4 0.1 3.7e-71 240.4 0.1 2.0 1 1 0 1 1 1 1 Amidase ATP-synt_A PF00119.20 ORF27137 - 0.2 11.6 0.0 0.35 10.8 0.0 1.3 1 0 0 1 1 1 0 ATP synthase A chain Pyr_redox_3 PF13738.6 ORF152415 - 2.5e-09 36.8 0.0 2e-07 30.5 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF152415 - 4.3e-08 32.7 0.1 4e-05 23.0 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FMO-like PF00743.19 ORF152415 - 1.6e-06 26.8 0.1 2.9e-05 22.7 0.0 2.4 2 1 0 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 ORF152415 - 1.5e-05 25.2 0.7 4.3e-05 23.7 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 ORF152415 - 0.0013 19.1 0.0 0.014 15.8 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding Amino_oxidase PF01593.24 ORF152415 - 0.0062 15.9 0.0 0.12 11.6 0.0 2.2 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Thi4 PF01946.17 ORF152415 - 0.0062 15.8 0.1 0.016 14.5 0.0 1.6 2 0 0 2 2 2 1 Thi4 family K_oxygenase PF13434.6 ORF152415 - 0.01 15.0 0.0 0.048 12.8 0.0 2.0 2 1 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 ORF152415 - 0.022 14.3 0.9 0.17 11.5 0.4 2.4 2 0 0 2 2 2 0 FAD dependent oxidoreductase Shikimate_DH PF01488.20 ORF152415 - 0.055 13.5 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase FAD_oxidored PF12831.7 ORF152415 - 0.065 12.6 0.2 0.11 11.8 0.2 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF152415 - 0.065 12.5 0.1 2 7.6 0.0 2.2 2 0 0 2 2 2 0 FAD binding domain GIDA PF01134.22 ORF152415 - 0.07 12.2 0.2 12 4.8 0.0 2.4 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_binding_2 PF00890.24 ORF152415 - 0.075 12.1 0.2 0.14 11.2 0.2 1.4 1 0 0 1 1 1 0 FAD binding domain p450 PF00067.22 ORF151979 - 2.5e-45 155.1 1.2 3.2e-45 154.7 1.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 SH3_2 PF07653.17 ORF145718 - 0.0081 15.8 0.0 0.14 11.8 0.0 2.4 2 0 0 2 2 2 1 Variant SH3 domain p450 PF00067.22 ORF143037 - 8.1e-46 156.7 0.6 1.9e-45 155.5 0.6 1.7 1 1 0 1 1 1 1 Cytochrome P450 p450 PF00067.22 ORF142225 - 7.4e-41 140.4 0.1 8.6e-41 140.1 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 ELH PF02323.15 ORF142225 - 0.13 11.6 0.0 0.23 10.8 0.0 1.3 1 0 0 1 1 1 0 Egg-laying hormone precursor GDC-P PF02347.16 ORF142225 - 0.16 10.7 0.0 0.25 10.1 0.0 1.2 1 0 0 1 1 1 0 Glycine cleavage system P-protein p450 PF00067.22 ORF125887 - 7.5e-46 156.8 0.2 1.1e-45 156.3 0.2 1.2 1 0 0 1 1 1 1 Cytochrome P450 Ion_trans PF00520.31 ORF122866 - 4.6e-15 55.5 2.5 6.2e-15 55.1 2.5 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF122866 - 4.1e-11 41.6 0.2 0.00034 19.9 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF122866 - 1.7e-10 39.9 0.4 0.0003 20.1 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF122866 - 1.8e-09 36.8 0.1 0.004 17.0 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF122866 - 1e-08 35.5 1.3 2.7e-08 34.1 1.3 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF122866 - 1.4e-05 24.9 0.0 0.01 15.6 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF122866 - 0.081 12.8 1.1 0.89 9.5 0.1 2.4 2 0 0 2 2 2 0 EF hand DPM3 PF08285.11 ORF122866 - 0.39 11.0 2.9 5.8 7.2 2.9 2.3 1 1 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF5109 PF17134.4 ORF120530 - 0.011 15.7 1.2 0.033 14.1 1.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF5109) EF-hand_1 PF00036.32 ORF120530 - 0.078 12.6 5.4 0.043 13.4 2.5 2.1 2 0 0 2 2 2 0 EF hand MT0933_antitox PF14013.6 ORF120530 - 0.3 11.4 2.7 1.4 9.2 0.5 3.3 3 0 0 3 3 3 0 MT0933-like antitoxin protein Pepsin-I3 PF06394.13 ORF120530 - 5.7 7.2 7.1 18 5.6 0.3 3.0 2 1 1 3 3 3 0 Pepsin inhibitor-3-like repeated domain PARP PF00644.20 ORF116068 - 5e-19 68.7 0.2 4.7e-18 65.5 0.2 2.2 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain EF-hand_1 PF00036.32 ORF116068 - 6.9e-08 31.5 0.0 0.0014 18.0 0.0 2.9 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF116068 - 6.2e-07 28.8 0.0 0.015 15.2 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF116068 - 0.00025 21.4 0.0 0.00089 19.7 0.0 2.0 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF116068 - 0.00029 20.6 0.1 0.51 10.2 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF116068 - 0.0023 17.3 3.2 0.024 14.1 0.1 2.8 3 0 0 3 3 3 1 EF hand ART-PolyVal PF18760.1 ORF116068 - 0.12 13.4 0.0 0.3 12.1 0.0 1.6 1 0 0 1 1 1 0 ADP-Ribosyltransferase in polyvalent proteins PPR_2 PF13041.6 ORF115176 - 4.6e-23 81.1 0.0 6.2e-06 26.3 0.0 5.9 5 1 1 6 6 6 5 PPR repeat family PPR_3 PF13812.6 ORF115176 - 3.2e-19 68.8 0.0 4.7e-09 36.2 0.0 5.7 4 2 2 6 6 6 4 Pentatricopeptide repeat domain PPR PF01535.20 ORF115176 - 1.3e-16 59.6 0.0 0.0046 17.1 0.0 6.9 7 0 0 7 7 7 3 PPR repeat PPR_1 PF12854.7 ORF115176 - 8.5e-11 41.4 0.0 0.018 14.7 0.0 6.4 6 0 0 6 6 6 3 PPR repeat PPR_long PF17177.4 ORF115176 - 0.0015 18.0 0.1 0.12 11.8 0.1 2.6 1 1 2 3 3 3 2 Pentacotripeptide-repeat region of PRORP Fumble PF03630.14 ORF112592 - 6.1e-85 285.3 0.0 7.3e-85 285.0 0.0 1.1 1 0 0 1 1 1 1 Fumble NOP19 PF10863.8 ORF112592 - 0.06 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Nucleolar protein 19 p450 PF00067.22 ORF108857 - 2.2e-42 145.4 0.1 2.6e-42 145.1 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF5442 PF17514.2 ORF108857 - 0.13 12.4 0.1 1.4 9.2 0.0 2.4 1 1 0 2 2 2 0 Family of unknown function (DUF5442) Aldedh PF00171.22 ORF10051 - 1.4e-70 238.2 0.0 2e-70 237.6 0.0 1.2 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1433 PF07252.11 ORF10051 - 0.033 14.4 0.1 0.14 12.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1433) ELO PF01151.18 ORF69573 - 1.5e-08 34.4 6.6 2.3e-08 33.9 6.6 1.2 1 0 0 1 1 1 1 GNS1/SUR4 family Patatin PF01734.22 ORF69573 - 2.9e-07 30.9 0.0 0.00013 22.2 0.0 2.3 1 1 0 1 1 1 1 Patatin-like phospholipase DUF3300 PF11737.8 ORF67054 - 2.3e-67 226.9 4.8 2.3e-67 226.9 4.8 2.4 2 2 0 2 2 2 1 Protein of unknown function (DUF3300) TTL PF03133.15 ORF66084 - 9.7e-79 264.5 9.8 1.6e-78 263.8 9.8 1.3 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF66084 - 5.1e-06 25.9 0.1 0.00017 20.9 0.0 2.6 2 1 0 2 2 2 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF66084 - 7.1e-06 25.5 0.0 0.09 12.0 0.0 2.7 2 1 0 2 2 2 2 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF66084 - 0.0025 17.4 0.0 0.0074 15.8 0.0 1.9 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus DHHC PF01529.20 ORF55616 - 2e-38 131.5 9.3 3.4e-38 130.8 9.3 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase Wzy_C PF04932.15 ORF55616 - 0.13 11.9 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 O-Antigen ligase DUF3687 PF12459.8 ORF55616 - 4.7 6.8 8.6 0.55 9.8 1.1 2.4 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein p450 PF00067.22 ORF53434 - 5.6e-48 163.8 0.9 7.5e-48 163.4 0.9 1.2 1 0 0 1 1 1 1 Cytochrome P450 Lipid_DES PF08557.10 ORF53434 - 0.2 11.2 2.6 6.7 6.3 0.7 2.6 2 0 0 2 2 2 0 Sphingolipid Delta4-desaturase (DES) APOBEC1 PF18769.1 ORF53434 - 0.21 11.8 1.4 34 4.8 0.0 3.3 2 1 1 3 3 3 0 APOBEC1 Csm1 PF12539.8 ORF47802 - 0.07 13.8 1.4 2.5 8.8 0.1 2.9 2 1 0 2 2 2 0 Chromosome segregation protein Csm1/Pcs1 Peptidase_C2 PF00648.21 ORF39591 - 2.2e-65 220.6 0.3 6.8e-65 219.0 0.3 1.8 1 1 0 1 1 1 1 Calpain family cysteine protease EF-hand_1 PF00036.32 ORF39591 - 0.0002 20.7 0.0 0.00057 19.3 0.0 1.8 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 ORF39591 - 0.00031 20.1 0.0 0.00068 19.0 0.0 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF39591 - 0.00046 19.9 0.0 0.0013 18.5 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF39591 - 0.0017 18.2 0.0 0.003 17.4 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF39591 - 0.0066 16.9 0.0 0.019 15.4 0.0 1.8 1 0 0 1 1 1 1 EF-hand domain pair p450 PF00067.22 ORF37255 - 1e-49 169.6 0.6 1.7e-49 168.8 0.6 1.3 1 0 0 1 1 1 1 Cytochrome P450 p450 PF00067.22 ORF35612 - 1.3e-52 179.1 0.2 2.2e-52 178.3 0.2 1.3 1 1 0 1 1 1 1 Cytochrome P450 ABC1 PF03109.16 ORF26623 - 5.2e-05 23.4 0.0 0.00013 22.1 0.0 1.7 1 0 0 1 1 1 1 ABC1 family APH PF01636.23 ORF26623 - 0.00023 21.2 0.3 0.00023 21.2 0.3 2.6 2 1 0 2 2 2 1 Phosphotransferase enzyme family p450 PF00067.22 ORF20090 - 3.5e-47 161.2 0.8 4.7e-47 160.8 0.8 1.2 1 0 0 1 1 1 1 Cytochrome P450 Lipid_DES PF08557.10 ORF20090 - 0.2 11.1 2.6 6.7 6.3 0.7 2.5 2 0 0 2 2 2 0 Sphingolipid Delta4-desaturase (DES) APOBEC1 PF18769.1 ORF20090 - 0.25 11.6 1.4 34 4.8 0.0 3.1 2 1 1 3 3 3 0 APOBEC1 Sugar_tr PF00083.24 ORF14683 - 4.4e-100 335.7 23.3 5e-100 335.5 23.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF14683 - 1.3e-26 93.4 19.1 1.3e-26 93.4 19.1 1.9 1 1 0 2 2 2 1 Major Facilitator Superfamily TRI12 PF06609.13 ORF14683 - 2e-05 23.3 5.4 4.2e-05 22.2 5.4 1.5 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) p450 PF00067.22 ORF1373 - 2.6e-47 161.6 1.6 3.4e-47 161.2 1.6 1.1 1 0 0 1 1 1 1 Cytochrome P450 AKAP95 PF04988.12 ORF1373 - 0.0072 16.6 0.4 0.28 11.4 0.0 2.5 2 0 0 2 2 2 1 A-kinase anchoring protein 95 (AKAP95) Sugar_tr PF00083.24 ORF124138 - 4.4e-100 335.7 23.3 5e-100 335.5 23.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF124138 - 1.2e-26 93.5 19.1 1.2e-26 93.5 19.1 1.9 1 1 0 2 2 2 1 Major Facilitator Superfamily TRI12 PF06609.13 ORF124138 - 3e-05 22.7 6.1 6.2e-05 21.6 6.1 1.4 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) Pro_isomerase PF00160.21 ORF123098 - 9.8e-44 149.4 0.2 1.6e-43 148.7 0.2 1.4 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FKBP_C PF00254.28 ORF123098 - 9.4e-29 99.6 0.2 2.9e-28 98.0 0.2 1.9 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase TPR_1 PF00515.28 ORF123098 - 1.4e-20 72.1 1.2 4.4e-11 42.1 1.4 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF123098 - 4.6e-15 54.4 1.1 4.4e-08 32.6 0.7 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF123098 - 1.2e-10 40.7 7.8 5.7e-07 29.2 0.9 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF123098 - 3.5e-09 36.7 0.0 0.00013 22.5 0.0 3.4 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF123098 - 2.6e-08 34.1 1.0 0.029 14.7 0.2 3.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF123098 - 2.9e-08 34.1 0.8 2e-06 28.2 0.3 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF123098 - 1.7e-06 27.6 10.0 0.00011 21.8 0.4 3.8 4 1 1 5 5 5 2 TPR repeat Fis1_TPR_C PF14853.6 ORF123098 - 2.1e-06 27.7 1.9 0.0081 16.2 0.0 3.4 1 1 2 3 3 3 2 Fis1 C-terminal tetratricopeptide repeat TPR_17 PF13431.6 ORF123098 - 2.4e-06 27.5 0.8 2.4e-06 27.5 0.8 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF123098 - 3.7e-06 27.0 0.0 6.9e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF123098 - 9.2e-06 25.3 0.2 0.33 11.1 0.1 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF123098 - 1.1e-05 26.0 0.2 0.001 19.6 0.2 2.6 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF123098 - 8.5e-05 22.9 0.8 0.00062 20.2 0.5 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_20 PF14561.6 ORF123098 - 9.6e-05 22.7 0.8 0.00028 21.1 0.4 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF123098 - 0.00065 19.5 0.6 2.2 8.3 0.4 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF123098 - 0.00084 19.5 2.9 0.00084 19.5 2.9 2.8 2 1 1 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 MIT PF04212.18 ORF123098 - 0.0031 17.5 9.1 1 9.5 0.1 3.4 1 1 3 4 4 4 2 MIT (microtubule interacting and transport) domain ZnuA PF01297.17 ORF123098 - 0.021 14.3 0.8 0.034 13.6 0.8 1.3 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic ERAP1_C PF11838.8 ORF123098 - 0.04 13.5 0.1 0.06 12.9 0.1 1.2 1 0 0 1 1 1 0 ERAP1-like C-terminal domain SMN PF06003.12 ORF123098 - 0.17 11.1 3.0 0.33 10.2 3.0 1.4 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) FUSC PF04632.12 ORF118104 - 0.0035 16.0 2.9 0.0055 15.3 2.9 1.2 1 0 0 1 1 1 1 Fusaric acid resistance protein family DUF1198 PF06711.11 ORF118104 - 0.036 14.1 0.2 0.17 11.9 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1198) DUF2754 PF10953.8 ORF118104 - 0.079 13.2 1.4 0.24 11.7 1.4 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) FUSC_2 PF13515.6 ORF118104 - 0.15 12.2 7.0 0.42 10.7 7.0 1.8 1 0 0 1 1 1 0 Fusaric acid resistance protein-like ArAE_1 PF06081.11 ORF118104 - 0.89 9.7 4.7 12 6.0 5.6 2.3 1 1 0 1 1 1 0 Aromatic acid exporter family member 1 Adaptin_N PF01602.20 ORF10854 - 5.3e-53 180.4 2.8 6.4e-53 180.1 2.8 1.1 1 0 0 1 1 1 1 Adaptin N terminal region Alpha_adaptinC2 PF02883.20 ORF10854 - 0.007 16.7 0.1 0.013 15.8 0.1 1.4 1 0 0 1 1 1 1 Adaptin C-terminal domain HEAT_2 PF13646.6 ORF10854 - 0.014 15.7 0.0 0.75 10.2 0.0 2.5 1 1 1 2 2 2 0 HEAT repeats GAGA_bind PF06217.12 ORF10854 - 0.092 13.0 5.0 0.14 12.4 5.0 1.3 1 0 0 1 1 1 0 GAGA binding protein-like family RRN3 PF05327.11 ORF10854 - 0.25 9.8 12.3 0.12 10.9 8.2 2.0 2 0 0 2 2 2 0 RNA polymerase I specific transcription initiation factor RRN3 RR_TM4-6 PF06459.12 ORF10854 - 0.79 9.5 11.9 1.2 8.9 11.9 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PGA2 PF07543.12 ORF10854 - 1.2 9.1 13.3 2.4 8.2 13.3 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 DUF2052 PF09747.9 ORF10854 - 1.4 9.0 13.2 2.2 8.3 13.2 1.2 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) PTPRCAP PF15713.5 ORF10854 - 3.6 7.9 11.7 6.2 7.1 11.7 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Amidohydro_3 PF07969.11 ORF105310 - 4.1e-15 56.2 0.6 2.6e-10 40.4 0.1 2.1 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 ORF105310 - 1.5e-07 31.1 0.0 2.2e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family HTH_ParB PF17762.1 ORF105310 - 0.052 13.4 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 HTH domain found in ParB protein DUF3449 PF11931.8 ORF88335 - 1.4e-64 217.3 0.9 1.4e-64 217.3 0.9 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF3449) SF3A3 PF16837.5 ORF88335 - 6.3e-20 71.5 5.5 1.7e-19 70.1 4.9 2.1 2 0 0 2 2 2 1 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 zf-C2H2_3rep PF18868.1 ORF88335 - 5.6e-05 23.8 4.3 0.0033 18.1 1.0 2.7 2 1 0 2 2 2 2 Zinc finger C2H2-type, 3 repeats zf-C2H2_2 PF12756.7 ORF88335 - 0.016 15.5 8.9 0.14 12.5 5.4 3.2 2 1 0 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 ORF88335 - 0.016 15.5 6.4 0.016 15.5 6.4 4.9 5 0 0 5 5 5 0 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF88335 - 0.017 15.5 14.8 0.15 12.5 4.8 4.5 5 0 0 5 5 5 0 Zinc-finger of C2H2 type SF3a60_bindingd PF12108.8 ORF88335 - 0.04 13.8 0.1 0.12 12.3 0.1 1.8 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain zf-C2H2_4 PF13894.6 ORF88335 - 2.1 9.4 16.5 3.1 8.9 0.1 4.3 5 0 0 5 5 5 0 C2H2-type zinc finger p450 PF00067.22 ORF85342 - 1.4e-37 129.5 0.0 1.8e-37 129.2 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF382 PF04037.13 ORF50599 - 1.1e-53 180.8 1.0 1.1e-53 180.8 1.0 3.1 3 0 0 3 3 3 1 Domain of unknown function (DUF382) PSP PF04046.16 ORF50599 - 9.5e-20 70.2 3.1 1.8e-19 69.3 3.1 1.5 1 0 0 1 1 1 1 PSP cNMP_binding PF00027.29 ORF43177 - 2.6e-18 65.9 0.0 9.3e-08 32.0 0.0 2.8 2 1 0 2 2 2 2 Cyclic nucleotide-binding domain MFS_1 PF07690.16 ORF42256 - 1.5e-23 83.4 31.2 1.8e-23 83.1 18.4 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF42256 - 1.2e-12 47.1 2.1 1.2e-12 47.1 2.1 3.0 2 1 1 3 3 3 1 MFS/sugar transport protein Ferlin_C PF16165.5 ORF42256 - 0.049 13.6 0.6 7.7 6.4 0.0 2.7 2 0 0 2 2 2 0 Ferlin C-terminus DUF2964 PF11177.8 ORF42256 - 2.2 8.6 7.6 2.2 8.5 0.8 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2964) MFS_1 PF07690.16 ORF32044 - 3.8e-39 134.6 29.9 4.1e-36 124.7 18.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF32044 - 0.17 10.3 11.9 0.083 11.3 0.5 3.3 2 2 1 3 3 3 0 Transmembrane secretion effector TMEM43 PF07787.12 ORF32044 - 5.3 6.3 5.0 5.4 6.3 1.0 2.6 2 0 0 2 2 2 0 Transmembrane protein 43 Kelch_1 PF01344.25 ORF29229 - 1.4e-05 24.6 0.1 0.05 13.2 0.0 2.7 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF29229 - 0.0011 19.1 0.1 0.029 14.7 0.0 3.1 3 0 0 3 3 3 1 Kelch motif MFS_1 PF07690.16 ORF140189 - 3.8e-39 134.6 29.9 4.1e-36 124.7 18.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF140189 - 0.17 10.3 11.9 0.083 11.3 0.5 3.3 2 2 1 3 3 3 0 Transmembrane secretion effector TMEM43 PF07787.12 ORF140189 - 5.3 6.3 5.0 5.4 6.3 1.0 2.6 2 0 0 2 2 2 0 Transmembrane protein 43 SBP_bac_5 PF00496.22 ORF120598 - 4.2e-20 72.1 0.0 5.6e-19 68.4 0.0 2.0 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle DUF382 PF04037.13 ORF112697 - 1.1e-53 180.8 1.0 1.1e-53 180.8 1.0 3.1 3 0 0 3 3 3 1 Domain of unknown function (DUF382) PSP PF04046.16 ORF112697 - 9.5e-20 70.2 3.1 1.8e-19 69.3 3.1 1.5 1 0 0 1 1 1 1 PSP IL8 PF00048.20 ORF99640 - 0.08 13.1 0.5 2.4 8.4 0.0 2.8 2 0 0 2 2 2 0 Small cytokines (intecrine/chemokine), interleukin-8 like DUF2769 PF10967.8 ORF99640 - 1.4 9.6 5.6 0.57 10.9 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2769) DUF3169 PF11368.8 ORF99640 - 4.5 6.7 15.6 0.044 13.3 3.8 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3169) GBP PF02263.19 ORF92092 - 6.9e-59 199.2 0.2 1.8e-58 197.8 0.2 1.7 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain GBP_C PF02841.14 ORF92092 - 6.5e-12 45.5 11.7 6.5e-12 45.5 11.7 1.7 2 1 0 2 2 2 1 Guanylate-binding protein, C-terminal domain MMR_HSR1 PF01926.23 ORF92092 - 0.036 14.1 0.0 0.12 12.5 0.0 2.0 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF2524 PF10732.9 ORF92092 - 0.56 10.5 6.3 2.2 8.7 5.1 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2524) RNA_helicase PF00910.22 ORF92092 - 0.68 10.4 3.9 83 3.6 0.9 3.5 2 1 0 3 3 3 0 RNA helicase p450 PF00067.22 ORF85675 - 2.6e-56 191.3 1.6 3.3e-56 190.9 1.6 1.1 1 0 0 1 1 1 1 Cytochrome P450 HSP90 PF00183.18 ORF81115 - 6.9e-217 721.4 19.1 8.9e-217 721.1 19.1 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF81115 - 0.072 13.1 1.0 0.3 11.0 0.1 2.1 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF81115 - 0.082 12.9 1.2 0.16 12.0 0.1 2.1 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF81115 - 0.53 10.2 2.8 23 5.0 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain Lectin_leg-like PF03388.13 ORF72215 - 4.7e-10 39.2 0.3 9.1e-10 38.3 0.3 1.4 1 0 0 1 1 1 1 Legume-like lectin family PI3K_P85_iSH2 PF16454.5 ORF72215 - 0.016 14.8 0.3 0.03 13.9 0.3 1.5 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain CorA PF01544.18 ORF72215 - 0.56 9.5 9.5 0.55 9.5 7.0 2.0 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein Laminin_II PF06009.12 ORF72215 - 2 8.4 8.2 2.3 8.2 4.7 2.5 2 1 1 3 3 3 0 Laminin Domain II Sec20 PF03908.13 ORF72215 - 6.5 6.7 7.1 8.7 6.3 1.6 2.9 1 1 1 2 2 2 0 Sec20 HSP90 PF00183.18 ORF68695 - 6.9e-217 721.4 19.1 8.9e-217 721.1 19.1 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF68695 - 0.072 13.1 1.0 0.3 11.0 0.1 2.1 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF68695 - 0.082 12.9 1.2 0.16 12.0 0.1 2.1 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF68695 - 0.53 10.2 2.8 23 5.0 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain OKR_DC_1 PF01276.20 ORF58575 - 9.3e-144 479.2 0.0 1.1e-143 479.0 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.15 ORF58575 - 1.4e-41 141.9 0.0 3.1e-41 140.8 0.0 1.5 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain Pyridoxal_deC PF00282.19 ORF58575 - 2.4e-05 23.2 0.0 3.9e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Late_protein_L1 PF00500.18 ORF58575 - 0.014 14.2 0.0 0.2 10.4 0.0 2.0 2 0 0 2 2 2 0 L1 (late) protein IL8 PF00048.20 ORF43420 - 0.08 13.1 0.5 2.4 8.4 0.0 2.8 2 0 0 2 2 2 0 Small cytokines (intecrine/chemokine), interleukin-8 like DUF2769 PF10967.8 ORF43420 - 1.4 9.6 5.6 0.57 10.9 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2769) DUF3169 PF11368.8 ORF43420 - 4.5 6.7 15.6 0.044 13.3 3.8 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3169) IL8 PF00048.20 ORF3271 - 0.08 13.1 0.5 2.4 8.4 0.0 2.8 2 0 0 2 2 2 0 Small cytokines (intecrine/chemokine), interleukin-8 like DUF2769 PF10967.8 ORF3271 - 1.4 9.6 5.6 0.57 10.9 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2769) DUF3169 PF11368.8 ORF3271 - 4.5 6.7 15.6 0.044 13.3 3.8 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3169) DUF3220 PF11516.8 ORF30140 - 0.032 14.5 2.1 4.9 7.4 0.1 3.8 3 1 0 3 3 3 0 Protein of unknown function (DUF3120) Fibritin_C PF07921.12 ORF30140 - 0.13 12.4 0.0 0.79 9.9 0.0 2.3 2 0 0 2 2 2 0 Fibritin C-terminal region MnmE_helical PF12631.7 ORF30140 - 0.31 11.2 10.1 4.8 7.3 1.2 3.6 3 2 0 3 3 3 0 MnmE helical domain Apolipoprotein PF01442.18 ORF30140 - 0.61 9.9 43.0 0.41 10.5 3.2 5.0 3 1 0 3 3 3 0 Apolipoprotein A1/A4/E domain DUF4795 PF16043.5 ORF30140 - 1.1 8.8 18.8 0.11 12.1 0.9 4.1 3 1 0 4 4 4 0 Domain of unknown function (DUF4795) KxDL PF10241.9 ORF30140 - 1.4 9.3 14.7 0.17 12.2 1.1 4.9 6 0 0 6 6 6 0 Uncharacterized conserved protein Baculo_PEP_C PF04513.12 ORF30140 - 2.4 8.2 14.5 4.1 7.4 0.3 4.5 4 2 0 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus Sugarporin_N PF11471.8 ORF30140 - 3.4 7.7 15.4 1.5 8.8 0.1 4.4 4 0 0 4 4 4 0 Maltoporin periplasmic N-terminal extension HSP90 PF00183.18 ORF26446 - 6.9e-217 721.4 19.1 8.9e-217 721.1 19.1 1.0 1 0 0 1 1 1 1 Hsp90 protein Cofac_haem_bdg PF04187.13 ORF26446 - 0.072 13.1 1.0 0.3 11.0 0.1 2.1 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN LOH1CR12 PF10158.9 ORF26446 - 0.082 12.9 1.2 0.16 12.0 0.1 2.1 2 0 0 2 2 2 0 Tumour suppressor protein SF3a60_bindingd PF12108.8 ORF26446 - 0.53 10.2 2.8 23 5.0 0.8 2.6 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain IL8 PF00048.20 ORF22833 - 0.08 13.1 0.5 2.4 8.4 0.0 2.8 2 0 0 2 2 2 0 Small cytokines (intecrine/chemokine), interleukin-8 like DUF2769 PF10967.8 ORF22833 - 1.4 9.6 5.6 0.57 10.9 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2769) DUF3169 PF11368.8 ORF22833 - 4.5 6.7 15.6 0.044 13.3 3.8 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3169) ENTH PF01417.20 ORF1781 - 7.3e-29 100.4 0.1 1.5e-28 99.3 0.0 1.6 2 0 0 2 2 2 1 ENTH domain ANTH PF07651.16 ORF1781 - 0.012 14.7 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 ANTH domain Na_Pi_cotrans PF02690.15 ORF17420 - 1.2e-38 132.3 25.2 1.8e-31 109.1 6.5 2.4 1 1 1 2 2 2 2 Na+/Pi-cotransporter PhoU PF01895.19 ORF17420 - 0.0001 22.7 5.8 0.15 12.5 2.3 3.2 2 1 1 3 3 3 2 PhoU domain Peptidase_M14 PF00246.24 ORF131310 - 2.7e-26 93.1 1.8 2.7e-26 93.1 1.8 1.5 2 0 0 2 2 2 1 Zinc carboxypeptidase AstE_AspA PF04952.14 ORF131310 - 7.4e-05 22.0 0.0 0.00013 21.1 0.0 1.4 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Cpn60_TCP1 PF00118.24 ORF12847 - 3e-155 517.6 3.2 3.4e-155 517.4 3.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Imm3 PF14425.6 ORF12847 - 0.12 12.5 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 Immunity protein Imm3 DUF1772 PF08592.11 ORF123229 - 1.3 9.3 5.2 3.8 7.8 0.3 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF1772) Ank_2 PF12796.7 ORF117853 - 9.8e-110 359.4 22.1 1.2e-17 64.2 0.1 7.0 1 1 6 8 8 8 8 Ankyrin repeats (3 copies) Ank PF00023.30 ORF117853 - 1.8e-83 271.6 27.2 8.7e-06 26.0 0.0 15.1 15 0 0 15 15 15 15 Ankyrin repeat Ank_5 PF13857.6 ORF117853 - 6.4e-72 236.7 22.4 9.2e-08 32.2 0.1 14.0 1 1 14 15 15 15 15 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF117853 - 2.2e-65 216.2 22.7 4.1e-08 33.6 0.0 9.9 2 2 9 12 12 12 12 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF117853 - 1e-57 185.3 7.9 0.00079 19.7 0.0 15.0 15 0 0 15 15 15 13 Ankyrin repeat YlzJ PF14035.6 ORF117853 - 0.0019 18.3 0.0 29 5.0 0.0 5.3 7 0 0 7 7 7 0 YlzJ-like protein VWA_3_C PF18571.1 ORF117853 - 0.018 14.9 9.2 45 4.0 0.0 6.6 7 0 0 7 7 7 0 von Willebrand factor type A C-terminal domain BNIP3 PF06553.12 ORF117853 - 0.13 11.9 3.4 3.4 7.3 0.2 4.1 3 2 1 4 4 4 0 BNIP3 INTS5_C PF14838.6 ORF117853 - 0.21 10.1 0.4 15 4.0 0.0 3.5 2 1 3 5 5 5 0 Integrator complex subunit 5 C-terminus Bd3614_N PF14442.6 ORF117853 - 0.53 10.6 6.3 40 4.6 0.1 4.8 3 2 2 5 5 5 0 Bd3614-like deaminase N-terminal Nse4-Nse3_bdg PF15412.6 ORF117853 - 0.99 9.6 13.4 15 5.7 0.0 6.5 8 0 0 8 8 8 0 Binding domain of Nse4/EID3 to Nse3-MAGE p450 PF00067.22 ORF105348 - 1e-42 146.5 1.5 1.3e-42 146.1 1.5 1.1 1 0 0 1 1 1 1 Cytochrome P450 DUF5354 PF17305.2 ORF105348 - 0.0036 17.5 0.2 1.6 9.0 0.0 3.0 2 1 1 3 3 3 2 Family of unknown function (DUF5354) Phosphodiest PF01663.22 ORF105348 - 0.065 12.8 0.1 0.087 12.4 0.1 1.2 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase Citrate_synt PF00285.21 ORF90220 - 7.7e-123 410.1 0.0 9.5e-123 409.8 0.0 1.1 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain ELFV_dehydrog PF00208.21 ORF86757 - 1.4e-52 178.9 0.1 4.3e-50 170.7 0.0 2.2 2 0 0 2 2 2 2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 ORF86757 - 2.6e-50 169.6 0.0 4.4e-50 168.9 0.0 1.4 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Bac_GDH PF05088.12 ORF86757 - 0.0019 15.8 0.0 0.0026 15.3 0.0 1.1 1 0 0 1 1 1 1 Bacterial NAD-glutamate dehydrogenase ApbA PF02558.16 ORF86757 - 0.0063 16.2 0.0 0.01 15.5 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA RRM_1 PF00076.22 ORF7984 - 1.8e-07 30.9 0.1 5.5e-07 29.3 0.1 1.8 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF7984 - 0.014 15.2 0.1 1.6 8.7 0.0 2.6 2 0 0 2 2 2 0 Occluded RNA-recognition motif DUF2510 PF10708.9 ORF7984 - 0.035 13.9 0.0 0.073 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2510) Macoilin PF09726.9 ORF7984 - 1.4 7.4 33.6 1.9 7.0 33.6 1.2 1 0 0 1 1 1 0 Macoilin family Mic1 PF07035.12 ORF6401 - 1.2e-16 60.8 5.9 1.3e-11 44.4 0.2 2.8 3 0 0 3 3 3 2 Colon cancer-associated protein Mic1-like ADP_ribosyl_GH PF03747.14 ORF59873 - 1.1e-54 186.2 0.0 1.5e-54 185.7 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Gly-zipper_Omp PF13488.6 ORF59873 - 0.047 13.7 0.1 4.9 7.2 0.0 2.3 2 0 0 2 2 2 0 Glycine zipper Ig_5 PF16681.5 ORF59873 - 0.73 10.3 3.3 1.2 9.5 0.1 2.6 2 0 0 2 2 2 0 Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain Gly-zipper_YMGG PF13441.6 ORF59873 - 1.2 9.0 3.8 1.3 8.8 0.2 2.1 2 0 0 2 2 2 0 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 ORF59873 - 2.6 8.0 5.5 4.6 7.2 0.5 2.3 2 0 0 2 2 2 0 Glycine zipper 2TM domain Zip PF02535.22 ORF59873 - 3.7 6.7 5.3 17 4.5 5.3 2.1 1 1 0 1 1 1 0 ZIP Zinc transporter p450 PF00067.22 ORF49633 - 1.8e-48 165.5 1.3 2.7e-48 164.9 1.3 1.2 1 0 0 1 1 1 1 Cytochrome P450 Ion_trans PF00520.31 ORF25632 - 5.7e-18 65.0 19.8 9.3e-18 64.3 19.8 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_8 PF13833.6 ORF25632 - 4.4e-07 29.7 0.2 9.9e-06 25.3 0.1 2.6 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF25632 - 1.5e-06 28.5 0.1 4.8e-06 26.9 0.0 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF25632 - 1.4e-05 24.3 0.3 0.0001 21.6 0.0 2.5 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF25632 - 5e-05 22.9 0.0 0.00025 20.7 0.0 2.3 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF25632 - 0.0077 15.7 0.0 0.0077 15.7 0.0 2.3 3 0 0 3 3 3 1 EF hand S10_plectin PF03501.15 ORF25632 - 0.11 12.5 0.1 0.63 10.2 0.1 2.2 2 0 0 2 2 2 0 Plectin/S10 domain NIF PF03031.18 ORF14672 - 6.6e-41 139.7 0.4 6.6e-41 139.7 0.4 2.6 3 0 0 3 3 3 1 NLI interacting factor-like phosphatase NODP PF07684.12 ORF14672 - 0.13 12.5 0.4 1.7 8.8 0.0 2.5 2 0 0 2 2 2 0 NOTCH protein TMEM126 PF07114.11 ORF112630 - 0.12 11.7 0.2 0.19 11.1 0.2 1.3 1 0 0 1 1 1 0 Transmembrane protein 126 MatE PF01554.18 ORF10297 - 2.8e-46 157.1 39.9 6.9e-25 87.6 15.6 2.6 3 0 0 3 3 3 2 MatE Sarcoglycan_1 PF04790.13 ORF10297 - 0.96 8.7 2.5 2 7.7 2.5 1.4 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein DUF4389 PF14333.6 ORF100522 - 0.023 14.6 1.6 0.023 14.6 1.6 3.9 4 0 0 4 4 4 0 Domain of unknown function (DUF4389) cEGF PF12662.7 ORF100522 - 0.12 12.3 1.7 0.29 11.1 1.7 1.6 1 0 0 1 1 1 0 Complement Clr-like EGF-like TNFR_16_TM PF18422.1 ORF100522 - 2.2 8.3 14.5 0.27 11.2 2.5 4.1 3 0 0 3 3 3 0 Tumor necrosis factor receptor member 16 trans-membrane domain Cu-oxidase_3 PF07732.15 ORF5284 - 8e-32 109.7 0.1 2.1e-31 108.4 0.1 1.8 1 0 0 1 1 1 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 ORF5284 - 2.1e-25 89.1 13.7 9.2e-24 83.7 9.7 2.9 2 1 0 2 2 2 2 Multicopper oxidase Cu-oxidase PF00394.22 ORF5284 - 4.2e-09 36.7 0.0 2.1e-05 24.7 0.0 2.7 2 1 0 2 2 2 2 Multicopper oxidase TAT_signal PF10518.9 ORF5284 - 0.00013 21.6 0.0 0.00034 20.3 0.0 1.8 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence WD40 PF00400.32 ORF49584 - 3.3e-41 138.5 12.1 1.1e-07 32.4 0.1 8.0 8 0 0 8 8 8 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF49584 - 0.00029 21.1 0.2 0.52 10.6 0.0 4.9 2 1 5 7 7 7 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF49584 - 0.00052 18.8 0.7 5.6 5.5 0.1 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF49584 - 0.002 17.0 0.0 0.95 8.1 0.0 3.7 2 1 2 4 4 4 1 Nup133 N terminal like Sugar_tr PF00083.24 ORF45566 - 2.1e-57 195.0 20.5 2.6e-57 194.7 20.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF45566 - 9.3e-25 87.3 8.7 9.3e-25 87.3 8.7 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily DSPc PF00782.20 ORF37793 - 2.4e-16 59.8 0.5 5.7e-16 58.5 0.0 1.9 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF37793 - 0.026 14.1 0.2 0.1 12.1 0.0 2.1 3 0 0 3 3 3 0 Protein-tyrosine phosphatase WD40 PF00400.32 ORF33614 - 3.3e-41 138.5 12.1 1.1e-07 32.4 0.1 8.0 8 0 0 8 8 8 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF33614 - 0.00029 21.1 0.2 0.52 10.6 0.0 4.9 2 1 5 7 7 7 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF33614 - 0.00052 18.8 0.7 5.6 5.5 0.1 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF33614 - 0.002 17.0 0.0 0.95 8.1 0.0 3.7 2 1 2 4 4 4 1 Nup133 N terminal like DUF4816 PF16086.5 ORF27919 - 0.026 14.4 1.6 0.026 14.4 1.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4816) p450 PF00067.22 ORF22443 - 1.3e-54 185.7 0.1 2.3e-54 184.9 0.1 1.4 1 1 0 1 1 1 1 Cytochrome P450 60KD_IMP PF02096.20 ORF142345 - 8.5e-13 48.5 0.6 1.4e-12 47.8 0.6 1.3 1 0 0 1 1 1 1 60Kd inner membrane protein Ank_5 PF13857.6 ORF142345 - 2.5e-12 46.8 0.3 2.8e-08 33.8 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF142345 - 1.1e-06 29.1 0.1 0.0002 21.9 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF142345 - 2.9e-06 27.8 0.0 8.1e-06 26.3 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF142345 - 0.0011 19.3 0.0 0.061 13.9 0.0 3.3 3 0 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF142345 - 0.0093 16.4 0.0 0.31 11.6 0.0 2.8 3 0 0 3 3 3 1 Ankyrin repeat DUF842 PF05811.13 ORF142345 - 0.035 13.8 1.0 0.056 13.1 1.0 1.3 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) SAGA-Tad1 PF12767.7 ORF142345 - 0.15 11.7 3.9 0.28 10.9 3.9 1.4 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit DUF1126 PF06565.12 ORF124510 - 7.5e-82 270.0 6.2 7.5e-28 96.4 0.4 3.3 3 0 0 3 3 3 3 DUF1126 PH-like domain RHH_7 PF16777.5 ORF124510 - 0.26 11.7 2.2 8.3 6.9 0.0 3.9 4 0 0 4 4 4 0 Transcriptional regulator, RHH-like, CopG WD40 PF00400.32 ORF111697 - 3.3e-41 138.5 12.1 1.1e-07 32.4 0.1 8.0 8 0 0 8 8 8 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF111697 - 0.00029 21.1 0.2 0.52 10.6 0.0 4.9 2 1 5 7 7 7 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF111697 - 0.00052 18.8 0.7 5.6 5.5 0.1 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF111697 - 0.002 17.0 0.0 0.95 8.1 0.0 3.7 2 1 2 4 4 4 1 Nup133 N terminal like HC2 PF07382.11 ORF110968 - 1.9e-07 31.4 0.1 2.8e-07 30.8 0.1 1.1 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 LPAM_1 PF08139.12 ORF110968 - 0.34 11.5 1.0 0.53 10.9 1.0 1.3 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Thioredoxin PF00085.20 ORF104180 - 9.5e-25 86.6 2.7 5.2e-23 81.0 0.5 3.0 2 1 0 2 2 2 1 Thioredoxin Thioredoxin_6 PF13848.6 ORF104180 - 7.5e-19 68.3 18.3 2e-12 47.4 4.2 4.1 4 1 0 4 4 4 3 Thioredoxin-like domain ERp29_N PF07912.13 ORF104180 - 1.4e-05 25.2 5.4 0.034 14.3 0.3 3.7 4 0 0 4 4 4 2 ERp29, N-terminal domain Thioredoxin_7 PF13899.6 ORF104180 - 0.00045 20.3 0.4 0.0025 17.9 0.1 2.5 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_8 PF13905.6 ORF104180 - 0.002 18.4 0.4 0.002 18.4 0.4 3.6 4 1 0 4 4 4 1 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF104180 - 0.0031 17.9 0.8 0.0031 17.9 0.8 3.9 3 2 1 4 4 4 1 Thioredoxin-like domain AhpC-TSA PF00578.21 ORF104180 - 0.024 14.6 0.3 0.097 12.6 0.3 2.1 1 0 0 1 1 1 0 AhpC/TSA family Dna2 PF08696.11 ORF89880 - 0.011 15.6 0.5 0.41 10.4 0.5 2.2 2 0 0 2 2 2 0 DNA replication factor Dna2 DUF1690 PF07956.11 ORF89880 - 7.1 7.1 8.5 0.52 10.7 1.2 2.2 1 1 1 2 2 2 0 Protein of Unknown function (DUF1690) Aminotran_1_2 PF00155.21 ORF89635 - 1.7e-32 113.0 0.0 2.2e-32 112.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Enkurin PF13864.6 ORF89635 - 0.1 13.0 0.0 0.23 11.9 0.0 1.5 1 0 0 1 1 1 0 Calmodulin-binding Sugar_tr PF00083.24 ORF76053 - 4.3e-38 131.3 22.5 1.2e-37 129.9 22.5 1.6 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF76053 - 7.5e-16 58.0 8.3 9e-11 41.3 0.1 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily p450 PF00067.22 ORF68477 - 4.5e-49 167.4 0.3 7.6e-49 166.7 0.3 1.2 1 0 0 1 1 1 1 Cytochrome P450 Asp PF00026.23 ORF54758 - 8e-23 81.3 0.1 1.4e-22 80.6 0.1 1.4 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF54758 - 0.0005 19.9 0.0 0.00087 19.1 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Citrate_synt PF00285.21 ORF40402 - 1.7e-123 412.2 0.0 2.3e-123 411.9 0.0 1.1 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Wx5_PLAF3D7 PF09688.10 ORF387 - 0.0021 18.1 3.9 0.0021 18.1 3.9 3.7 3 0 0 3 3 3 1 Protein of unknown function (Wx5_PLAF3D7) ABC_tran_CTD PF16326.5 ORF387 - 0.0095 16.2 20.8 0.023 15.0 0.4 3.8 3 0 0 3 3 3 2 ABC transporter C-terminal domain MCPsignal PF00015.21 ORF387 - 0.043 13.6 5.3 0.1 12.4 2.1 2.5 2 1 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain ZnuA PF01297.17 ORF387 - 0.046 13.1 4.3 0.073 12.5 1.2 2.2 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic TMPIT PF07851.13 ORF387 - 0.12 11.6 17.2 0.15 11.2 0.9 2.4 2 0 0 2 2 2 0 TMPIT-like protein SMI1_KNR4 PF09346.10 ORF387 - 0.14 12.6 0.1 0.14 12.6 0.1 2.4 2 1 0 2 2 2 0 SMI1 / KNR4 family (SUKH-1) ADIP PF11559.8 ORF387 - 0.51 10.4 15.6 0.079 13.0 11.0 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Rotamase PF00639.21 ORF387 - 0.51 11.3 0.1 0.51 11.3 0.1 3.3 2 1 0 2 2 2 0 PPIC-type PPIASE domain DUF1664 PF07889.12 ORF387 - 2.6 8.1 8.8 3.4 7.7 3.6 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF4407 PF14362.6 ORF387 - 5.4 6.3 11.3 0.83 8.9 7.6 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks19.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks19.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks19.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks19.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:03:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RVT_2 PF07727.14 ORF5850 - 5.6e-16 58.9 0.0 2.8e-15 56.6 0.0 1.9 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_2 PF07727.14 ORF67760 - 2.2e-33 115.9 0.0 4.1e-33 115.0 0.0 1.4 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) zf-CCHC PF00098.23 ORF67760 - 7.9e-06 25.7 1.7 9.3e-05 22.3 1.7 3.2 1 0 0 1 1 1 1 Zinc knuckle RVT_2 PF07727.14 ORF15453 - 5.1e-16 59.0 0.0 2.6e-15 56.7 0.0 2.0 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) AAA_8 PF12780.7 ORF73322 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF73322 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF73322 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF73322 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF73322 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF73322 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF73322 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF73322 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF73322 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF73322 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF73322 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF73322 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF73322 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF73322 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF73322 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF68003 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF68003 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF68003 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF68003 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF68003 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF68003 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF68003 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF68003 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF68003 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF68003 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF68003 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF68003 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF68003 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF68003 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF68003 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF67677 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF67677 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF67677 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF67677 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF67677 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF67677 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF67677 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF67677 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF67677 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF67677 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF67677 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF67677 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF67677 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF67677 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF67677 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF57205 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF57205 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF57205 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF57205 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF57205 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF57205 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF57205 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF57205 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF57205 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF57205 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF57205 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF57205 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF57205 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF57205 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF57205 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF46137 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF46137 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF46137 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF46137 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF46137 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF46137 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF46137 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF46137 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF46137 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF46137 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF46137 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF46137 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF46137 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF46137 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF46137 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF26882 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF26882 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF26882 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF26882 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF26882 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF26882 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF26882 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF26882 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF26882 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF26882 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF26882 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF26882 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF26882 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF26882 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF26882 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF16897 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF16897 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF16897 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF16897 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF16897 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF16897 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF16897 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF16897 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF16897 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF16897 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF16897 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF16897 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF16897 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF16897 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF16897 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF136070 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF136070 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF136070 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF136070 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF136070 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF136070 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF136070 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF136070 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF136070 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF136070 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF136070 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF136070 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF136070 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF136070 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF136070 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF132741 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF132741 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF132741 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF132741 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF132741 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF132741 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF132741 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF132741 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF132741 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF132741 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF132741 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF132741 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF132741 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF132741 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF132741 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF106687 - 1.6e-97 325.9 0.9 1.2e-96 323.0 0.0 2.8 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 ORF106687 - 1.9e-86 290.0 0.0 1.9e-86 290.0 0.0 2.3 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF106687 - 2.8e-81 271.9 6.4 8.6e-81 270.2 6.4 1.9 1 0 0 1 1 1 1 ATP-binding dynein motor region MT PF12777.7 ORF106687 - 8.2e-64 215.8 16.0 8.2e-64 215.8 16.0 1.8 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF106687 - 9.2e-62 207.8 1.1 2.8e-61 206.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 ORF106687 - 1.2e-50 171.6 0.0 4.7e-50 169.6 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF106687 - 4.7e-33 113.8 0.1 1.3e-31 109.2 0.0 3.2 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_lid_1 PF17857.1 ORF106687 - 2.4e-22 79.0 0.2 9e-22 77.2 0.2 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 ORF106687 - 4.8e-20 71.9 0.9 4.8e-20 71.9 0.9 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 ORF106687 - 8.9e-12 45.2 0.1 0.0015 18.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) TsaE PF02367.17 ORF106687 - 0.0045 17.0 0.0 0.026 14.5 0.1 2.3 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPP PF04728.13 ORF106687 - 0.0047 17.3 3.1 0.035 14.5 3.1 2.6 1 0 0 1 1 1 1 Lipoprotein leucine-zipper AAA PF00004.29 ORF106687 - 0.045 14.2 0.1 0.27 11.6 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF106687 - 0.11 12.3 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF106687 - 0.7 10.3 5.7 3.9 7.8 0.0 3.9 3 1 1 4 4 4 0 AAA ATPase domain AAA_8 PF12780.7 ORF59893 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF59893 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF59893 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF59893 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF59893 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF59893 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF59893 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF59893 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF59893 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF59893 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF55258 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF55258 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF55258 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF55258 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF55258 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF55258 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF55258 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF55258 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF55258 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF55258 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF55197 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF55197 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF55197 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF55197 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF55197 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF55197 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF55197 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF55197 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF55197 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF55197 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF46812 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF46812 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF46812 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF46812 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF46812 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF46812 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF46812 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF46812 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF46812 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF46812 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF4236 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF4236 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF4236 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF4236 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF4236 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF4236 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF4236 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF4236 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF4236 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF4236 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF29753 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF29753 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF29753 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF29753 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF29753 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF29753 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF29753 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF29753 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF29753 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF29753 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF27250 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF27250 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF27250 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF27250 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF27250 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF27250 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF27250 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF27250 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF27250 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF27250 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF22414 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF22414 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF22414 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF22414 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF22414 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF22414 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF22414 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF22414 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF22414 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF22414 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF19062 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF19062 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF19062 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF19062 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF19062 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF19062 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF19062 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF19062 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF19062 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF19062 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus AAA_8 PF12780.7 ORF139548 - 2.6e-97 325.2 0.0 4.9e-97 324.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF139548 - 3.5e-81 271.5 2.6 3.5e-81 271.5 2.6 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF139548 - 5.6e-79 265.5 0.3 1.4e-78 264.2 0.3 1.8 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain MT PF12777.7 ORF139548 - 8.5e-68 228.9 14.9 1.9e-67 227.8 14.9 1.6 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 ORF139548 - 7.7e-47 159.1 0.0 2e-46 157.8 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF139548 - 1.6e-39 134.7 1.4 1.1e-38 131.9 0.0 3.3 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 ORF139548 - 2.8e-34 118.2 0.0 7.1e-34 116.9 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF139548 - 2.1e-20 72.8 1.5 1.8e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF139548 - 0.01 15.8 0.0 0.052 13.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) EHN PF06441.12 ORF139548 - 0.13 12.6 0.0 15 6.0 0.0 3.9 3 1 0 3 3 3 0 Epoxide hydrolase N terminus Ephrin_rec_like PF07699.13 ORF54871 - 0.0034 17.1 6.6 0.0034 17.1 6.6 12.1 8 4 4 12 12 12 5 Putative ephrin-receptor like LuxT_C PF18285.1 ORF54871 - 0.021 15.3 0.1 0.12 13.0 0.1 2.4 1 0 0 1 1 1 0 Tetracycline repressor LuxT C-terminal domain Ephrin_rec_like PF07699.13 ORF50201 - 0.0034 17.1 6.6 0.0034 17.1 6.6 12.1 8 4 4 12 12 12 5 Putative ephrin-receptor like LuxT_C PF18285.1 ORF50201 - 0.021 15.3 0.1 0.12 13.0 0.1 2.4 1 0 0 1 1 1 0 Tetracycline repressor LuxT C-terminal domain AAA_8 PF12780.7 ORF90346 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF90346 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF90346 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF90346 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF90346 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF90346 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF90346 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF90346 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF88800 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF88800 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF88800 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF88800 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF88800 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF88800 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF88800 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF88800 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF77401 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF77401 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF77401 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF77401 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF77401 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF77401 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF77401 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF77401 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF69821 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF69821 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF69821 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF69821 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF69821 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF69821 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF69821 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF69821 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF66328 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF66328 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF66328 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF66328 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF66328 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF66328 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF66328 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF66328 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF36720 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF36720 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF36720 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF36720 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF36720 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF36720 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF36720 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF36720 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF146344 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF146344 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF146344 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF146344 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF146344 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF146344 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF146344 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF146344 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF138632 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF138632 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF138632 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF138632 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF138632 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF138632 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF138632 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF138632 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF137817 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF137817 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF137817 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF137817 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF137817 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF137817 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF137817 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF137817 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF120497 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF120497 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF120497 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF120497 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF120497 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF120497 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF120497 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF120497 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF115279 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF115279 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF115279 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF115279 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF115279 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF115279 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF115279 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF115279 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF11392 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF11392 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF11392 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF11392 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF11392 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF11392 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF11392 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF11392 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF111594 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF111594 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF111594 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF111594 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF111594 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF111594 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF111594 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF111594 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF108772 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF108772 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF108772 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF108772 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF108772 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF108772 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF108772 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF108772 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_8 PF12780.7 ORF108392 - 6.1e-85 284.7 0.0 1.1e-84 283.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 ORF108392 - 4.6e-75 251.5 8.4 7.1e-75 250.9 5.6 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF108392 - 6.3e-69 232.5 0.0 1.3e-68 231.5 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF108392 - 5.6e-48 162.9 0.0 1.2e-47 161.8 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF108392 - 6.9e-37 126.2 0.0 8.6e-36 122.6 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF108392 - 5.2e-32 111.2 21.5 5.2e-32 111.2 21.5 2.4 2 1 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_1 PF17857.1 ORF108392 - 8.6e-06 25.9 1.7 8.6e-06 25.9 1.7 3.3 3 0 0 3 3 3 1 AAA+ lid domain AAA_5 PF07728.14 ORF108392 - 0.00035 20.6 0.2 0.011 15.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) HECT PF00632.25 ORF71519 - 1.3e-57 195.7 0.2 6.7e-57 193.3 0.0 2.3 2 0 0 2 2 2 1 HECT-domain (ubiquitin-transferase) RCC1 PF00415.18 ORF71519 - 3.3e-13 50.0 7.6 8.7e-10 39.1 0.0 4.6 4 1 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF71519 - 8.3e-06 25.5 0.1 8.3e-06 25.5 0.1 4.5 5 0 0 5 5 5 1 Regulator of chromosome condensation (RCC1) repeat RNA_pol_3_Rpc31 PF11705.8 ORF71519 - 0.13 12.5 19.0 0.33 11.2 19.0 1.7 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 HECT PF00632.25 ORF34400 - 1.3e-57 195.7 0.2 6.7e-57 193.3 0.0 2.3 2 0 0 2 2 2 1 HECT-domain (ubiquitin-transferase) RCC1 PF00415.18 ORF34400 - 3.3e-13 50.0 7.6 8.7e-10 39.1 0.0 4.6 4 1 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF34400 - 8.3e-06 25.5 0.1 8.3e-06 25.5 0.1 4.5 5 0 0 5 5 5 1 Regulator of chromosome condensation (RCC1) repeat RNA_pol_3_Rpc31 PF11705.8 ORF34400 - 0.13 12.5 19.0 0.33 11.2 19.0 1.7 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 PTS_2-RNA PF01885.16 ORF5842 - 8.8e-10 38.9 0.0 1.6e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PTS_2-RNA PF01885.16 ORF15461 - 8.8e-10 38.9 0.0 1.6e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family PTS_2-RNA PF01885.16 ORF9707 - 9.7e-07 29.0 0.0 1.9e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Ephrin_rec_like PF07699.13 ORF53698 - 0.003 17.3 6.3 0.003 17.3 6.3 12.0 3 3 8 13 13 13 6 Putative ephrin-receptor like DUF4212 PF13937.6 ORF53698 - 0.0056 17.0 0.2 0.012 15.9 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4212) Ephrin_rec_like PF07699.13 ORF128294 - 0.003 17.3 6.3 0.003 17.3 6.3 12.0 3 3 8 13 13 13 6 Putative ephrin-receptor like DUF4212 PF13937.6 ORF128294 - 0.0056 17.0 0.2 0.012 15.9 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4212) Ephrin_rec_like PF07699.13 ORF117204 - 0.003 17.3 6.3 0.003 17.3 6.3 12.0 3 3 8 13 13 13 6 Putative ephrin-receptor like DUF4212 PF13937.6 ORF117204 - 0.0056 17.0 0.2 0.012 15.9 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4212) PTS_2-RNA PF01885.16 ORF111125 - 9.5e-07 29.0 0.0 1.8e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks1.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks1.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks1.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks1.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:04:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RNA_pol_Rpb2_7 PF04560.20 ORF13474 - 0.58 10.6 2.4 0.93 9.9 2.4 1.3 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 7 ROK PF00480.20 ORF133248 - 5.8e-05 22.7 0.0 7.1e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 ROK family DUF1096 PF06493.11 ORF133107 - 0.59 10.6 8.5 0.14 12.6 4.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1096) mRNA_stabil PF13929.6 ORF131216 - 0.0029 16.7 0.9 0.0031 16.5 0.9 1.1 1 0 0 1 1 1 1 mRNA stabilisation DUF1348 PF07080.11 ORF131216 - 0.096 12.6 0.2 0.14 12.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1348) Ribosomal_S9 PF00380.19 ORF131119 - 6.7e-46 155.7 0.6 7.5e-46 155.6 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 GREB1 PF15782.5 ORF129823 - 0.29 8.2 4.9 0.32 8.0 4.9 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer zf-RING_2 PF13639.6 ORF129622 - 2.5e-10 40.5 5.8 2.5e-10 40.5 5.8 1.5 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF129622 - 2.7e-07 30.8 7.2 7e-07 29.4 7.2 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF129622 - 3.1e-07 30.1 5.4 7.1e-07 29.0 5.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF129622 - 6.2e-06 26.1 4.5 1.3e-05 25.1 4.5 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF129622 - 6.6e-06 25.9 5.7 1.3e-05 25.0 5.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF129622 - 1.6e-05 24.5 1.3 1.6e-05 24.5 1.3 1.7 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF129622 - 7.5e-05 22.5 5.0 0.00014 21.7 5.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF129622 - 0.0041 17.1 4.0 0.0088 16.1 4.0 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Baculo_RING PF05883.11 ORF129622 - 0.0043 17.0 2.0 0.0067 16.4 1.1 1.6 1 1 1 2 2 2 1 Baculovirus U-box/Ring-like domain RINGv PF12906.7 ORF129622 - 0.0078 16.3 6.4 0.015 15.4 6.4 1.5 1 0 0 1 1 1 1 RING-variant domain zf-RING_UBOX PF13445.6 ORF129622 - 0.0086 16.1 4.5 0.018 15.0 4.5 1.6 1 0 0 1 1 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF129622 - 0.021 14.4 3.1 0.043 13.4 3.1 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3H2C3 PF17122.5 ORF129622 - 0.036 14.1 3.0 0.11 12.6 3.0 1.9 1 1 0 1 1 1 0 Zinc-finger FANCL_C PF11793.8 ORF129622 - 0.063 13.5 6.9 0.094 12.9 4.5 2.2 1 1 1 2 2 2 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF129622 - 0.27 11.1 5.3 1.3 8.9 5.5 2.0 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-met2 PF12907.7 ORF12885 - 0.37 11.0 0.2 0.37 11.0 0.2 2.0 3 0 0 3 3 3 0 Zinc-binding DUF2674 PF10879.8 ORF1280 - 0.13 11.8 0.0 0.28 10.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2674) Ribosomal_S11 PF00411.19 ORF126966 - 5.2e-44 149.1 1.3 6.2e-44 148.9 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 IF-2B PF01008.17 ORF12617 - 7.1e-31 107.5 2.7 5.2e-30 104.6 2.7 1.9 1 1 0 1 1 1 1 Initiation factor 2 subunit family TarH PF02203.15 ORF125165 - 0.026 14.5 0.5 0.038 13.9 0.5 1.2 1 0 0 1 1 1 0 Tar ligand binding domain homologue zf-met2 PF12907.7 ORF124692 - 0.37 11.0 0.2 0.37 11.0 0.2 2.0 3 0 0 3 3 3 0 Zinc-binding EVI2A PF05399.11 ORF12455 - 8.2 5.9 9.1 13 5.3 9.1 1.3 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Forkhead PF00250.18 ORF124516 - 0.04 14.2 0.0 0.066 13.5 0.0 1.3 1 0 0 1 1 1 0 Forkhead domain SGS PF05002.15 ORF124222 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain SGS PF05002.15 ORF123398 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain SGS PF05002.15 ORF122434 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain HAD_2 PF13419.6 ORF121931 - 0.0081 16.3 0.2 0.009 16.1 0.2 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Cyclin_C PF02984.19 ORF121931 - 0.081 13.0 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Cyclin, C-terminal domain SGS PF05002.15 ORF121814 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain Ribosomal_S11 PF00411.19 ORF120388 - 5.2e-44 149.1 1.3 6.2e-44 148.9 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 DUF4488 PF14869.6 ORF120218 - 0.14 12.1 2.5 3.7 7.5 0.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4488) RNA_pol_Rpb2_1 PF04563.15 ORF120218 - 0.2 11.2 3.5 0.2 11.1 2.8 1.3 1 1 0 1 1 1 0 RNA polymerase beta subunit MENTAL PF10457.9 ORF11952 - 0.042 13.7 0.5 0.044 13.6 0.5 1.2 1 0 0 1 1 1 0 Cholesterol-capturing domain Mito_carr PF00153.27 ORF119185 - 0.002 18.0 0.4 0.0034 17.3 0.4 1.4 1 0 0 1 1 1 1 Mitochondrial carrier protein PT-VENN PF04829.13 ORF119185 - 0.033 14.3 0.8 0.033 14.3 0.8 2.1 3 0 0 3 3 3 0 Pre-toxin domain with VENN motif Ribosomal_S5_C PF03719.15 ORF119185 - 0.083 12.4 0.3 0.17 11.3 0.3 1.6 1 0 0 1 1 1 0 Ribosomal protein S5, C-terminal domain eIF-5a PF01287.20 ORF118689 - 8.5e-11 41.8 0.0 1.1e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold Ail_Lom PF06316.11 ORF117932 - 1.9e-20 73.4 3.0 8.9e-18 64.7 3.0 2.2 1 1 0 1 1 1 1 Enterobacterial Ail/Lom protein OMP_b-brl PF13505.6 ORF117932 - 2.9e-19 69.9 11.3 3.2e-19 69.8 11.3 1.0 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain OMP_b-brl_3 PF14905.6 ORF117932 - 0.00017 20.7 0.8 0.0002 20.5 0.8 1.0 1 0 0 1 1 1 1 Outer membrane protein beta-barrel family OMP_b-brl_2 PF13568.6 ORF117932 - 0.0047 17.0 6.3 0.4 10.7 6.3 2.2 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain DUF3575 PF12099.8 ORF117932 - 0.069 12.5 1.4 0.094 12.0 1.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3575) EVI2A PF05399.11 ORF117740 - 8.2 5.9 9.1 13 5.3 9.1 1.3 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Uds1 PF15456.6 ORF11722 - 0.25 11.5 3.1 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Up-regulated During Septation Fumarate_red_C PF02300.17 ORF117181 - 2.2e-56 189.4 3.9 2.5e-56 189.2 3.9 1.0 1 0 0 1 1 1 1 Fumarate reductase subunit C NUDIX_4 PF14815.6 ORF116361 - 0.0048 16.9 0.0 0.0063 16.5 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain BSD PF03909.17 ORF11618 - 0.089 12.8 0.4 0.25 11.4 0.2 1.8 2 0 0 2 2 2 0 BSD domain HSP70 PF00012.20 ORF113398 - 1.5e-12 46.5 6.3 1.7e-12 46.4 6.3 1.0 1 0 0 1 1 1 1 Hsp70 protein Spc7 PF08317.11 ORF113398 - 0.58 9.0 3.9 0.71 8.7 3.9 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Ribosomal_60s PF00428.19 ORF113398 - 2.2 8.9 13.7 0.061 13.9 4.2 2.1 2 0 0 2 2 2 0 60s Acidic ribosomal protein DUF4791 PF16039.5 ORF112598 - 0.043 13.4 0.1 0.056 13.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4791) DUF2420 PF10336.9 ORF112598 - 0.12 12.4 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) AFOR_N PF02730.15 ORF11239 - 0.26 11.1 0.0 0.33 10.8 0.0 1.2 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, N-terminal domain Uds1 PF15456.6 ORF112374 - 0.25 11.5 3.1 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Up-regulated During Septation PTS_2-RNA PF01885.16 ORF111826 - 0.029 14.4 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Spc7 PF08317.11 ORF11042 - 0.00041 19.3 3.9 0.00047 19.1 3.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein Filament PF00038.21 ORF11042 - 0.0069 16.0 2.5 0.009 15.6 2.5 1.1 1 0 0 1 1 1 1 Intermediate filament protein Sigma70_ner PF04546.13 ORF11042 - 0.013 15.4 3.4 0.015 15.2 3.4 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region ZYG-11_interact PF05884.12 ORF11042 - 0.027 13.9 0.4 0.03 13.7 0.4 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 Ribosomal_S15 PF00312.22 ORF11042 - 0.041 14.1 3.8 0.041 14.1 3.8 1.7 2 0 0 2 2 2 0 Ribosomal protein S15 VASP_tetra PF08776.11 ORF11042 - 0.057 13.0 2.8 0.057 13.0 2.8 2.8 2 1 0 2 2 2 0 VASP tetramerisation domain Syntaxin_2 PF14523.6 ORF11042 - 0.15 12.4 9.3 0.89 10.0 9.3 2.0 1 1 0 1 1 1 0 Syntaxin-like protein YtxH PF12732.7 ORF11042 - 0.47 11.0 2.4 8.7 7.0 0.1 2.3 2 0 0 2 2 2 0 YtxH-like protein Tubulin_2 PF13809.6 ORF110242 - 0.0014 17.9 3.2 0.0015 17.8 3.2 1.0 1 0 0 1 1 1 1 Tubulin like ISET-FN3_linker PF16625.5 ORF10831 - 0.094 13.3 0.0 0.19 12.2 0.0 1.5 1 0 0 1 1 1 0 Unstructured linking region I-set and fnIII on Brother of CDO MCD_N PF17408.2 ORF108142 - 0.0078 16.3 0.0 0.011 15.9 0.0 1.2 1 0 0 1 1 1 1 Malonyl-CoA decarboxylase N-terminal domain ORC6 PF05460.13 ORF107870 - 0.4 9.9 11.1 0.44 9.8 11.1 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) SGS PF05002.15 ORF107795 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain Kelch_3 PF13415.6 ORF105974 - 0.091 13.1 0.2 0.17 12.2 0.2 1.5 1 0 0 1 1 1 0 Galactose oxidase, central domain Torus PF16131.5 ORF105714 - 0.097 13.4 0.9 0.14 12.8 0.5 1.6 2 0 0 2 2 2 0 Torus domain Imm49 PF15575.6 ORF10461 - 0.0016 18.3 0.4 0.002 17.9 0.4 1.1 1 0 0 1 1 1 1 Immunity protein 49 Es2 PF09751.9 ORF10461 - 0.071 12.8 0.2 0.082 12.6 0.2 1.0 1 0 0 1 1 1 0 Nuclear protein Es2 ELH PF02323.15 ORF10461 - 0.1 11.9 0.1 0.13 11.6 0.1 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor DUF2617 PF10936.8 ORF104214 - 0.017 15.2 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF2617 IFT20 PF14931.6 ORF103556 - 9.1e-38 129.1 15.1 1e-37 128.9 15.1 1.0 1 0 0 1 1 1 1 Intraflagellar transport complex B, subunit 20 TMF_DNA_bd PF12329.8 ORF103556 - 0.06 13.3 12.9 0.086 12.9 7.2 2.4 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Atg14 PF10186.9 ORF103556 - 2.2 7.3 11.2 2.5 7.1 11.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMPIT PF07851.13 ORF103556 - 3.8 6.7 6.0 4.5 6.4 6.0 1.2 1 0 0 1 1 1 0 TMPIT-like protein SGS PF05002.15 ORF103357 - 0.017 15.2 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 SGS domain DUF2617 PF10936.8 ORF102713 - 0.017 15.2 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF2617 Ribosomal_S11 PF00411.19 ORF101491 - 5.2e-44 149.1 1.3 6.2e-44 148.9 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 DNA_pol3_delta2 PF13177.6 ORF100545 - 0.0057 16.4 0.3 0.0073 16.1 0.3 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit zf-DNL PF05180.12 ORF100545 - 0.032 14.1 0.9 0.053 13.5 0.9 1.4 1 0 0 1 1 1 0 DNL zinc finger AAA_lid_4 PF17864.1 ORF100545 - 0.057 13.2 0.1 0.091 12.5 0.1 1.4 1 0 0 1 1 1 0 RuvB AAA lid domain MFMR PF07777.11 NODE_48633_length_388_cov_1.643059_g40756_i0reverse_frame_1 - 0.034 14.6 0.1 0.043 14.3 0.1 1.2 1 0 0 1 1 1 0 G-box binding protein MFMR Peptidase_C2 PF00648.21 NODE_48631_length_388_cov_1.832861_g40754_i0reverse_frame_1 - 0.031 13.3 0.0 0.035 13.1 0.0 1.1 1 0 0 1 1 1 0 Calpain family cysteine protease DUF3833 PF12915.7 NODE_48631_length_388_cov_1.832861_g40754_i0reverse_frame_1 - 0.1 12.2 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3833) RSF PF14876.6 NODE_48630_length_388_cov_1.841360_g40753_i0forward_frame_1 - 0.039 12.9 0.2 0.052 12.5 0.2 1.1 1 0 0 1 1 1 0 Respiratory growth transcriptional regulator GSHPx PF00255.19 NODE_48621_length_388_cov_2.504249_g40744_i0reverse_frame_1 - 0.024 14.2 0.2 0.026 14.1 0.2 1.3 1 0 0 1 1 1 0 Glutathione peroxidase Phage_int_SAM_5 PF13102.6 NODE_48617_length_388_cov_2.779037_g40740_i0reverse_frame_1 - 0.015 15.6 1.8 0.025 14.9 1.8 1.3 1 0 0 1 1 1 0 Phage integrase SAM-like domain XPG_N PF00752.17 NODE_48617_length_388_cov_2.779037_g40740_i0reverse_frame_1 - 0.087 13.3 0.1 0.19 12.2 0.1 1.7 1 1 0 1 1 1 0 XPG N-terminal domain DUF92 PF01940.16 NODE_48614_length_388_cov_2.932011_g40737_i0forward_frame_1 - 0.092 12.1 0.1 0.11 11.9 0.1 1.2 1 0 0 1 1 1 0 Integral membrane protein DUF92 PetM PF08041.11 NODE_48604_length_388_cov_4.742210_g40727_i0reverse_frame_1 - 0.021 14.4 1.1 5.8 6.6 0.0 3.3 2 2 2 4 4 4 0 PetM family of cytochrome b6f complex subunit 7 PIN_8 PF18476.1 NODE_48604_length_388_cov_4.742210_g40727_i0forward_frame_1 - 0.1 12.5 3.2 0.15 11.9 3.2 1.3 1 0 0 1 1 1 0 PIN like domain DUF5447 PF17525.2 NODE_48601_length_388_cov_10.589235_g40724_i0reverse_frame_1 - 0.095 13.2 2.8 0.09 13.3 1.5 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5447) Bac_rhodopsin PF01036.18 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_1 - 1.9e-20 73.4 1.1 2.2e-20 73.2 1.1 1.0 1 0 0 1 1 1 1 Bacteriorhodopsin-like protein Heliorhodopsin PF18761.1 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_1 - 0.009 15.3 0.7 0.01 15.1 0.7 1.1 1 0 0 1 1 1 1 Heliorhodopsin MerC PF03203.14 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_1 - 0.031 14.7 1.7 0.041 14.3 1.7 1.1 1 0 0 1 1 1 0 MerC mercury resistance protein UPF0242 PF06785.11 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_1 - 0.37 10.9 1.1 0.47 10.5 1.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus SKG6 PF08693.10 NODE_48596_length_388_cov_43.606232_g40719_i0reverse_frame_1 - 0.24 10.9 0.4 0.38 10.2 0.4 1.3 1 0 0 1 1 1 0 Transmembrane alpha-helix domain DUF2628 PF10947.8 NODE_48595_length_388_cov_49.022663_g40718_i0forward_frame_1 - 0.69 10.3 3.7 0.58 10.5 1.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2628) LMBR1 PF04791.16 NODE_48588_length_388_cov_65.770538_g40711_i0reverse_frame_1 - 0.00015 20.8 1.0 0.00018 20.6 1.0 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein Raftlin PF15250.6 NODE_48587_length_388_cov_66.274788_g40710_i0forward_frame_1 - 0.12 11.1 0.4 0.19 10.4 0.4 1.2 1 0 0 1 1 1 0 Raftlin Ribosomal_S5 PF00333.20 NODE_48587_length_388_cov_66.274788_g40710_i0forward_frame_1 - 0.12 12.3 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S5, N-terminal domain MRP PF09387.10 NODE_48584_length_388_cov_73.087819_g40707_i0forward_frame_1 - 0.039 13.9 0.1 0.051 13.5 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial RNA binding protein MRP DUF2063 PF09836.9 NODE_48582_length_388_cov_77.303116_g40705_i0forward_frame_1 - 0.15 12.3 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 Putative DNA-binding domain Bap31 PF05529.12 NODE_48580_length_388_cov_77.637394_g40703_i0forward_frame_1 - 0.025 14.5 0.1 0.037 13.9 0.1 1.4 1 1 0 1 1 1 0 Bap31/Bap29 transmembrane region Cep3 PF16846.5 NODE_48580_length_388_cov_77.637394_g40703_i0forward_frame_1 - 0.16 10.5 0.0 0.19 10.2 0.0 1.0 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit B DUF5548 PF17702.1 NODE_48577_length_388_cov_87.277620_g40700_i0forward_frame_1 - 0.085 12.6 0.6 0.12 12.1 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5548) zf-RING_2 PF13639.6 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 7.2e-06 26.2 1.9 7.2e-06 26.2 1.9 2.1 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 3.3e-05 24.1 5.4 5.2e-05 23.4 5.4 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 3.6e-05 23.5 2.3 3.6e-05 23.5 2.3 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.00012 22.0 3.9 0.00012 22.0 3.9 2.2 1 1 1 2 2 2 1 zinc-RING finger domain zf-RING_11 PF17123.5 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.00081 19.1 3.0 0.0021 17.7 0.7 2.3 2 0 0 2 2 2 1 RING-like zinc finger Prok-RING_4 PF14447.6 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.0044 16.8 1.9 0.0044 16.8 1.9 2.1 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.0065 16.5 0.5 0.013 15.6 0.5 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.024 14.6 3.4 0.077 13.0 3.4 1.9 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 0.05 13.5 10.0 0.22 11.4 10.0 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 1.2 9.0 7.4 0.3 11.0 1.4 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3H2C3 PF17122.5 NODE_48563_length_388_cov_124.892351_g40686_i0forward_frame_1 - 3.9 7.6 9.8 0.26 11.3 4.5 1.8 2 1 0 2 2 2 0 Zinc-finger MAGE PF01454.19 NODE_48550_length_388_cov_801.558074_g40674_i0forward_frame_1 - 0.071 12.8 0.4 0.15 11.8 0.3 1.5 2 0 0 2 2 2 0 MAGE family zf-HC5HC2H PF13771.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_1 - 0.012 15.9 2.0 0.017 15.3 2.0 1.3 1 0 0 1 1 1 0 PHD-like zinc-binding domain TEA PF01285.18 NODE_48532_length_389_cov_2.415254_g40656_i0forward_frame_1 - 3 8.0 5.7 2.7 8.2 0.2 2.5 2 1 1 3 3 3 0 TEA/ATTS domain 7TM-7TMR_HD PF07698.11 NODE_48518_length_389_cov_41.494350_g40642_i0forward_frame_1 - 0.078 12.7 1.3 0.095 12.4 1.3 1.2 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase Connexin PF00029.19 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 0.46 10.2 1.7 0.52 10.0 1.7 1.2 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 0.96 8.1 3.6 0.88 8.3 3.6 1.1 1 0 0 1 1 1 0 Presenilin Atrophin-1 PF03154.15 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 1.3 7.2 9.6 1.6 6.9 9.6 1.1 1 0 0 1 1 1 0 Atrophin-1 family CDC45 PF02724.14 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_1 - 2.1 6.6 6.8 2 6.6 6.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Endonuclease_5 PF04493.14 NODE_48487_length_389_cov_205.861582_g40611_i0forward_frame_1 - 0.18 11.5 0.0 0.25 11.0 0.0 1.1 1 0 0 1 1 1 0 Endonuclease V Stathmin PF00836.19 NODE_48486_length_389_cov_211.663842_g40610_i0reverse_frame_1 - 0.041 13.8 5.9 0.063 13.2 5.9 1.3 1 0 0 1 1 1 0 Stathmin family CAAD PF14159.6 NODE_48486_length_389_cov_211.663842_g40610_i0forward_frame_1 - 0.039 13.8 0.2 0.073 12.9 0.1 1.7 2 1 0 2 2 2 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase zf-UBR PF02207.20 NODE_48477_length_390_cov_1.470423_g40601_i0reverse_frame_1 - 0.82 9.9 10.4 6.4 7.0 10.4 2.3 1 1 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) C1_2 PF03107.16 NODE_48477_length_390_cov_1.470423_g40601_i0reverse_frame_1 - 0.94 9.8 10.2 1.6 9.1 7.0 2.7 2 1 0 2 2 2 0 C1 domain HTH_3 PF01381.22 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 3.1e-07 30.3 0.1 9.2e-07 28.8 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_37 PF13744.6 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.0056 16.6 0.0 0.011 15.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain CENP-B_N PF04218.13 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.018 14.7 0.0 0.064 12.9 0.0 1.9 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain Sigma54_DBD PF04552.13 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.021 14.6 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 Sigma-54, DNA binding domain HTH_26 PF13443.6 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.062 13.7 0.1 0.13 12.7 0.0 1.6 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_IclR PF09339.10 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.065 13.0 0.0 0.098 12.5 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_31 PF13560.6 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.1 13.0 0.0 0.17 12.3 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 NODE_48469_length_390_cov_2.135211_g40593_i0reverse_frame_1 - 0.11 12.4 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 MarR family Nop14 PF04147.12 NODE_48465_length_390_cov_2.419718_g40589_i0forward_frame_1 - 0.044 12.0 0.1 0.054 11.7 0.1 1.1 1 0 0 1 1 1 0 Nop14-like family DNA_pol_B_2 PF03175.13 NODE_48460_length_390_cov_2.740845_g40584_i0forward_frame_1 - 0.0047 15.9 0.0 0.0047 15.9 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral CDH PF02611.15 NODE_48460_length_390_cov_2.740845_g40584_i0forward_frame_1 - 0.084 12.5 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 CDP-diacylglycerol pyrophosphatase Glyco_tranf_2_4 PF13704.6 NODE_48455_length_390_cov_3.329577_g40579_i0reverse_frame_1 - 0.068 13.7 0.2 0.34 11.5 0.2 2.0 1 1 0 1 1 1 0 Glycosyl transferase family 2 Aldedh PF00171.22 NODE_48450_length_390_cov_4.414085_g40574_i0forward_frame_1 - 0.18 10.2 0.1 0.23 9.9 0.1 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family HTH_Tnp_Tc3_1 PF11427.8 NODE_48438_length_390_cov_64.819718_g40562_i0reverse_frame_1 - 0.12 12.3 0.4 3.2 7.7 0.0 2.4 2 0 0 2 2 2 0 Tc3 transposase Meckelin PF09773.9 NODE_48431_length_390_cov_84.718310_g40555_i0forward_frame_1 - 0.28 9.2 1.1 0.65 8.0 0.5 1.6 1 1 0 2 2 2 0 Meckelin (Transmembrane protein 67) DUF3730 PF12530.8 NODE_48418_length_390_cov_135.307042_g40542_i0reverse_frame_1 - 0.031 13.8 0.1 0.037 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3730) ETRAMP PF09716.10 NODE_48409_length_390_cov_339.138028_g40533_i0reverse_frame_1 - 0.004 17.2 0.5 0.0044 17.0 0.5 1.1 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) SR-25 PF10500.9 NODE_48409_length_390_cov_339.138028_g40533_i0reverse_frame_1 - 1.1 8.8 11.0 1.4 8.4 11.0 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Xan_ur_permease PF00860.20 NODE_48398_length_391_cov_1.733146_g40522_i0forward_frame_2 - 6.6e-19 67.9 2.4 6.6e-19 67.9 2.4 1.6 1 1 1 2 2 2 1 Permease family Lamprin PF06403.11 NODE_48381_length_391_cov_3.143258_g40505_i0forward_frame_2 - 9.2 6.2 9.8 18 5.3 9.8 1.4 1 1 0 1 1 1 0 Lamprin PhoLip_ATPase_N PF16209.5 NODE_48374_length_391_cov_5.671348_g40498_i0reverse_frame_3 - 2.3e-18 65.6 1.7 2.4e-18 65.6 0.3 1.7 2 0 0 2 2 2 1 Phospholipid-translocating ATPase N-terminal Lamprin PF06403.11 NODE_48372_length_391_cov_10.491573_g40496_i0reverse_frame_3 - 0.006 16.6 14.8 0.041 13.9 10.7 2.9 1 1 1 2 2 2 1 Lamprin MIT_LIKE_ACTX PF17556.2 NODE_48372_length_391_cov_10.491573_g40496_i0reverse_frame_3 - 0.1 13.2 0.1 0.13 12.9 0.1 1.2 1 0 0 1 1 1 0 MIT-like atracotoxin family SCAB-ABD PF16711.5 NODE_48362_length_391_cov_76.452247_g40486_i0reverse_frame_3 - 0.03 14.2 1.3 0.047 13.6 1.3 1.2 1 0 0 1 1 1 0 Actin-binding domain of plant-specific actin-binding protein EbsA PF17255.2 NODE_48362_length_391_cov_76.452247_g40486_i0reverse_frame_2 - 0.12 12.7 2.9 0.17 12.2 2.9 1.2 1 0 0 1 1 1 0 EbsA-like protein PP2C PF00481.21 NODE_48359_length_391_cov_82.898876_g40483_i0reverse_frame_3 - 0.00025 20.8 0.1 0.00043 20.0 0.1 1.3 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 NODE_48359_length_391_cov_82.898876_g40483_i0reverse_frame_3 - 0.16 11.9 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) DUF21 PF01595.20 NODE_48359_length_391_cov_82.898876_g40483_i0forward_frame_3 - 0.14 11.8 0.7 1.5 8.5 0.5 1.9 1 1 1 2 2 2 0 Cyclin M transmembrane N-terminal domain Atg14 PF10186.9 NODE_48357_length_391_cov_86.741573_g40481_i0reverse_frame_2 - 0.038 13.1 9.5 0.041 13.0 9.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 WD40_alt PF14077.6 NODE_48357_length_391_cov_86.741573_g40481_i0reverse_frame_2 - 0.11 12.4 6.8 2.3 8.1 0.5 2.8 2 1 1 3 3 3 0 Alternative WD40 repeat motif Histidinol_dh PF00815.20 NODE_48357_length_391_cov_86.741573_g40481_i0reverse_frame_2 - 0.26 10.2 1.4 0.28 10.2 1.4 1.1 1 0 0 1 1 1 0 Histidinol dehydrogenase EMP70 PF02990.16 NODE_48353_length_391_cov_99.682584_g40477_i0reverse_frame_3 - 1.6 7.3 8.8 1.9 7.1 8.8 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 Nup188 PF10487.9 NODE_48347_length_391_cov_140.834270_g40471_i0reverse_frame_3 - 0.058 11.3 0.0 0.068 11.1 0.0 1.0 1 0 0 1 1 1 0 Nucleoporin subcomplex protein binding to Pom34 Cas_Cas02710 PF09670.10 NODE_48347_length_391_cov_140.834270_g40471_i0forward_frame_2 - 0.043 12.6 0.0 0.045 12.5 0.0 1.0 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) Glucos_trans_II PF14264.6 NODE_48345_length_391_cov_148.157303_g40469_i0reverse_frame_2 - 0.072 12.4 4.8 0.33 10.3 2.3 1.9 1 1 1 2 2 2 0 Glucosyl transferase GtrII Lact-deh-memb PF09330.11 NODE_48345_length_391_cov_148.157303_g40469_i0forward_frame_3 - 0.075 12.4 0.0 0.083 12.2 0.0 1.0 1 0 0 1 1 1 0 D-lactate dehydrogenase, membrane binding Rab15_effector PF15208.6 NODE_48343_length_391_cov_155.910112_g40467_i0forward_frame_3 - 0.12 11.6 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Rab15 effector Enterotoxin_HS1 PF08090.11 NODE_48343_length_391_cov_155.910112_g40467_i0forward_frame_3 - 5 7.2 11.1 2.6 8.1 5.1 3.4 3 1 0 3 3 3 0 Heat stable E.coli enterotoxin 1 Pkinase PF00069.25 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 2.1e-29 102.7 0.0 2.5e-29 102.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 2.4e-19 69.6 0.0 2.8e-19 69.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 1.7e-07 30.8 0.0 2e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 0.00037 20.5 0.0 0.0004 20.4 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 0.072 12.6 0.0 0.092 12.2 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_3 - 0.08 11.7 0.0 0.084 11.6 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Mpt_N PF09176.11 NODE_48338_length_391_cov_280.494382_g40462_i0forward_frame_2 - 0.086 13.0 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal Clp_N PF02861.20 NODE_48333_length_391_cov_549.446629_g40458_i0reverse_frame_2 - 1.7 8.9 9.2 2 8.6 1.6 2.6 2 1 0 2 2 2 0 Clp amino terminal domain, pathogenicity island component Dynein_light PF01221.18 NODE_48331_length_391_cov_1621.949438_g40456_i0reverse_frame_2 - 1.9e-20 72.9 0.3 3.2e-20 72.2 0.3 1.4 1 0 0 1 1 1 1 Dynein light chain type 1 AAA_lid_11 PF18198.1 NODE_48324_length_392_cov_1.649860_g40450_i0reverse_frame_3 - 0.022 14.6 0.3 0.031 14.1 0.2 1.4 1 1 0 1 1 1 0 Dynein heavy chain AAA lid domain ATP-synt_8 PF00895.20 NODE_48324_length_392_cov_1.649860_g40450_i0forward_frame_3 - 5.8 7.4 0.0 5.8 7.4 0.0 3.2 3 0 0 3 3 3 0 ATP synthase protein 8 Topoisom_I_N PF02919.15 NODE_48323_length_392_cov_1.733894_g40449_i0forward_frame_2 - 1.5e-34 119.3 2.4 1.7e-34 119.2 2.4 1.0 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, DNA binding fragment FIT1_2 PF17357.2 NODE_48322_length_392_cov_1.789916_g40448_i0forward_frame_2 - 0.088 12.9 2.7 2.5 8.3 0.1 2.4 1 1 0 2 2 2 0 Facilitor Of iron transport 1 and 2 Herpes_U34 PF04541.13 NODE_48319_length_392_cov_1.851541_g40445_i0reverse_frame_2 - 0.012 14.9 0.1 0.016 14.5 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus virion protein U34 Peptidase_M24 PF00557.24 NODE_48319_length_392_cov_1.851541_g40445_i0forward_frame_3 - 7.1e-08 32.4 0.0 9.6e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 HbrB PF08539.11 NODE_48316_length_392_cov_1.966387_g40442_i0reverse_frame_2 - 0.082 12.9 0.7 3.1 7.8 0.1 2.1 1 1 1 2 2 2 0 HbrB-like MmgE_PrpD PF03972.14 NODE_48309_length_392_cov_2.714286_g40435_i0reverse_frame_3 - 6.9e-40 136.9 0.1 7.4e-40 136.8 0.1 1.0 1 0 0 1 1 1 1 MmgE/PrpD family Promethin PF16015.5 NODE_48306_length_392_cov_3.691877_g40432_i0reverse_frame_2 - 0.0017 18.3 5.0 0.0021 17.9 5.0 1.1 1 0 0 1 1 1 1 Promethin DUF2207 PF09972.9 NODE_48306_length_392_cov_3.691877_g40432_i0reverse_frame_2 - 0.022 13.5 1.9 0.025 13.4 1.9 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Orf78 PF06024.12 NODE_48306_length_392_cov_3.691877_g40432_i0reverse_frame_2 - 0.14 12.5 1.0 2.6 8.4 0.0 2.1 2 0 0 2 2 2 0 Orf78 (ac78) Ferlin_C PF16165.5 NODE_48306_length_392_cov_3.691877_g40432_i0reverse_frame_2 - 0.46 10.4 0.1 0.46 10.4 0.1 1.9 2 0 0 2 2 2 0 Ferlin C-terminus T4_deiodinase PF00837.17 NODE_48304_length_392_cov_4.193277_g40430_i0reverse_frame_3 - 0.051 12.9 0.0 0.065 12.5 0.0 1.1 1 0 0 1 1 1 0 Iodothyronine deiodinase DAPDH_C PF16654.5 NODE_48302_length_392_cov_6.537815_g40428_i0reverse_frame_2 - 0.14 12.0 0.1 0.19 11.6 0.1 1.2 1 0 0 1 1 1 0 Diaminopimelic acid dehydrogenase C-terminal domain Porphyrn_cat_1 PF18206.1 NODE_48301_length_392_cov_19.240896_g40427_i0forward_frame_2 - 0.045 14.4 1.7 0.062 13.9 1.7 1.2 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 Cbl_N2 PF02761.14 NODE_48297_length_392_cov_58.983193_g40423_i0reverse_frame_3 - 0.097 13.4 12.1 0.35 11.6 2.1 3.1 3 0 0 3 3 3 0 CBL proto-oncogene N-terminus, EF hand-like domain DUF4366 PF14283.6 NODE_48293_length_392_cov_71.434174_g40419_i0reverse_frame_3 - 0.03 14.4 0.6 0.044 13.8 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) DUF817 PF05675.12 NODE_48293_length_392_cov_71.434174_g40419_i0forward_frame_2 - 0.064 12.9 0.5 0.064 12.9 0.5 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF817) Hydrolase PF00702.26 NODE_48288_length_392_cov_88.456583_g40414_i0reverse_frame_2 - 1.9e-07 31.6 0.1 2.3e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase ROS_MUCR PF05443.11 NODE_48278_length_392_cov_125.509804_g40405_i0reverse_frame_3 - 0.014 15.4 1.2 0.017 15.2 1.2 1.1 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein DUF243 PF03103.17 NODE_48278_length_392_cov_125.509804_g40405_i0reverse_frame_3 - 0.12 12.7 4.1 0.87 9.9 2.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF243) TT_ORF1 PF02956.14 NODE_48278_length_392_cov_125.509804_g40405_i0reverse_frame_2 - 4.1 6.0 11.2 3.4 6.2 11.2 1.2 1 0 0 1 1 1 0 TT viral orf 1 RPN6_N PF18055.1 NODE_48273_length_392_cov_150.711485_g40400_i0reverse_frame_2 - 0.087 13.2 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN6 N-terminal domain EFG_C PF00679.24 NODE_48266_length_392_cov_266.815126_g40393_i0reverse_frame_3 - 0.054 13.5 0.0 0.096 12.7 0.0 1.4 1 0 0 1 1 1 0 Elongation factor G C-terminus DUF995 PF06191.12 NODE_48265_length_392_cov_270.865546_g40392_i0forward_frame_2 - 0.072 12.8 0.4 0.097 12.4 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF995) SET PF00856.28 NODE_48263_length_392_cov_298.308123_g38329_i1reverse_frame_3 - 1.7e-14 54.5 0.0 2.7e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 SET domain DUF1195 PF06708.11 NODE_48263_length_392_cov_298.308123_g38329_i1reverse_frame_3 - 0.17 11.6 0.0 0.24 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1195) oligo_HPY PF08352.12 NODE_48257_length_392_cov_8095.369748_g40385_i0reverse_frame_3 - 2.6 8.6 4.5 1.6 9.3 0.9 2.5 1 1 2 3 3 3 0 Oligopeptide/dipeptide transporter, C-terminal region SpoVS PF04232.12 NODE_48257_length_392_cov_8095.369748_g40385_i0reverse_frame_2 - 0.32 10.8 7.9 1.5 8.6 1.0 2.2 1 1 1 2 2 2 0 Stage V sporulation protein S (SpoVS) Calcyon PF06387.11 NODE_48257_length_392_cov_8095.369748_g40385_i0reverse_frame_2 - 0.94 9.4 4.8 11 6.0 0.3 2.8 1 1 2 3 3 3 0 D1 dopamine receptor-interacting protein (calcyon) DUF2427 PF10348.9 NODE_48255_length_393_cov_1.837989_g40383_i0forward_frame_2 - 0.18 11.6 1.7 1.7 8.5 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF2427) DUF3446 PF11928.8 NODE_48254_length_393_cov_1.868715_g40382_i0forward_frame_2 - 3 8.2 7.0 0.28 11.5 1.5 1.9 2 0 0 2 2 2 0 Early growth response N-terminal domain DUF3418 PF11898.8 NODE_48249_length_393_cov_2.178771_g40377_i0forward_frame_3 - 1.1e-53 182.9 0.0 1.2e-53 182.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) DUF2249 PF10006.9 NODE_48249_length_393_cov_2.178771_g40377_i0forward_frame_3 - 0.057 13.3 0.2 0.41 10.5 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) SSFA2_C PF14723.6 NODE_48248_length_393_cov_2.458101_g40376_i0reverse_frame_3 - 0.013 15.4 1.1 0.018 14.9 1.1 1.2 1 0 0 1 1 1 0 Sperm-specific antigen 2 C-terminus Trans_reg_C PF00486.28 NODE_48246_length_393_cov_2.511173_g40374_i0reverse_frame_3 - 1.1e-23 83.1 0.1 1.5e-23 82.7 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal MarR_2 PF12802.7 NODE_48246_length_393_cov_2.511173_g40374_i0reverse_frame_3 - 0.025 14.4 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 MarR family tRNA_bind_3 PF17176.4 NODE_48245_length_393_cov_2.773743_g40373_i0forward_frame_2 - 0.043 14.1 0.0 0.084 13.2 0.0 1.5 1 1 0 1 1 1 0 tRNA-binding domain His_Me_b4a2 PF18275.1 NODE_48243_length_393_cov_2.955307_g40371_i0forward_frame_3 - 0.94 9.6 2.8 1.9 8.6 0.6 2.1 2 0 0 2 2 2 0 His-Me finger endonuclease beta4-alpha2 domain EFP_N PF08207.12 NODE_48241_length_393_cov_3.053073_g40369_i0forward_frame_2 - 2.3e-17 62.7 0.1 3.6e-17 62.2 0.1 1.3 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 NODE_48241_length_393_cov_3.053073_g40369_i0forward_frame_2 - 5.8e-14 51.9 3.0 8.9e-14 51.3 3.0 1.3 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain Cys_rich_CWC PF14375.6 NODE_48240_length_393_cov_3.251397_g40368_i0forward_frame_2 - 0.63 10.5 5.6 0.14 12.5 1.7 2.0 2 0 0 2 2 2 0 Cysteine-rich CWC DUF3086 PF11285.8 NODE_48238_length_393_cov_3.536313_g40366_i0forward_frame_3 - 0.021 13.9 0.5 0.024 13.8 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3086) HSBP1 PF06825.12 NODE_48238_length_393_cov_3.536313_g40366_i0forward_frame_3 - 0.078 12.8 0.1 0.22 11.4 0.0 1.8 2 0 0 2 2 2 0 Heat shock factor binding protein 1 SR-25 PF10500.9 NODE_48237_length_393_cov_3.553073_g40365_i0reverse_frame_3 - 0.00081 19.1 6.3 0.00081 19.1 6.3 1.5 2 0 0 2 2 2 1 Nuclear RNA-splicing-associated protein AP3D1 PF06375.11 NODE_48237_length_393_cov_3.553073_g40365_i0reverse_frame_3 - 1 9.6 9.3 1.4 9.2 9.3 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DoxX PF07681.12 NODE_48236_length_393_cov_3.575419_g40364_i0forward_frame_2 - 1.1e-16 61.1 14.2 1.5e-16 60.7 14.2 1.2 1 0 0 1 1 1 1 DoxX DoxX_2 PF13564.6 NODE_48236_length_393_cov_3.575419_g40364_i0forward_frame_2 - 0.0011 19.0 7.7 0.0016 18.5 7.7 1.2 1 0 0 1 1 1 1 DoxX-like family SURF4 PF02077.15 NODE_48236_length_393_cov_3.575419_g40364_i0forward_frame_2 - 0.011 15.3 6.2 0.05 13.2 6.2 1.8 1 1 0 1 1 1 0 SURF4 family Phosphorylase PF00343.20 NODE_48235_length_393_cov_5.301676_g40363_i0forward_frame_3 - 1.5e-48 165.7 0.3 1.7e-48 165.5 0.3 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase TssC PF17541.2 NODE_48235_length_393_cov_5.301676_g40363_i0forward_frame_3 - 0.006 15.5 0.0 0.0072 15.2 0.0 1.1 1 0 0 1 1 1 1 Type VI secretion system, TssC, VipB # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks200.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks200.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks200.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks200.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Thiolase_C PF02803.18 NODE_48227_length_393_cov_55.145251_g40355_i0reverse_frame_2 - 1.2e-25 89.5 1.5 1.6e-25 89.2 1.5 1.1 1 0 0 1 1 1 1 Thiolase, C-terminal domain BLM10_N PF16547.5 NODE_48217_length_393_cov_81.703911_g40345_i0forward_frame_3 - 0.16 12.3 1.3 1.8 8.9 0.4 2.1 1 1 0 2 2 2 0 Proteasome-substrate-size regulator, N-terminal MAP65_ASE1 PF03999.12 NODE_48217_length_393_cov_81.703911_g40345_i0forward_frame_3 - 1.7 7.2 10.6 1.9 7.1 10.6 1.0 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) PPR_2 PF13041.6 NODE_48216_length_393_cov_85.846369_g40344_i0reverse_frame_3 - 0.0073 16.5 0.0 1.3 9.3 0.0 2.2 2 0 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_48216_length_393_cov_85.846369_g40344_i0reverse_frame_3 - 0.13 12.4 0.0 0.35 11.0 0.0 1.7 1 1 1 2 2 2 0 Pentatricopeptide repeat domain CBM_1 PF00734.18 NODE_48215_length_393_cov_87.234637_g40343_i0forward_frame_2 - 0.2 11.7 4.4 2.4 8.2 0.1 2.4 2 0 0 2 2 2 0 Fungal cellulose binding domain DUF5478 PF17572.2 NODE_48214_length_393_cov_87.248603_g40342_i0forward_frame_3 - 0.12 12.5 5.1 0.22 11.7 4.9 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5478) Coagulin PF02035.15 NODE_48209_length_393_cov_111.117318_g40337_i0reverse_frame_3 - 0.027 14.4 0.1 0.036 14.0 0.1 1.2 1 0 0 1 1 1 0 Coagulin DCA16 PF15349.6 NODE_48209_length_393_cov_111.117318_g40337_i0reverse_frame_3 - 0.14 11.7 2.6 0.18 11.3 2.6 1.1 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 HAP2-GCS1 PF10699.9 NODE_48209_length_393_cov_111.117318_g40337_i0reverse_frame_2 - 0.064 13.2 2.6 0.91 9.6 0.5 2.5 2 0 0 2 2 2 0 Male gamete fusion factor 3Beta_HSD PF01073.19 NODE_48209_length_393_cov_111.117318_g40337_i0forward_frame_2 - 0.2 10.6 0.0 0.24 10.3 0.0 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family TMEM61 PF15105.6 NODE_48205_length_393_cov_123.243017_g40333_i0reverse_frame_2 - 0.15 11.9 1.5 0.15 11.8 0.3 1.5 1 1 1 2 2 2 0 TMEM61 protein family tRNA_U5-meth_tr PF05958.11 NODE_48202_length_393_cov_140.689944_g40330_i0forward_frame_3 - 2.8e-27 95.7 0.2 5.8e-27 94.6 0.2 1.4 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Bunya_NS-S PF01104.17 NODE_48199_length_393_cov_151.916201_g40327_i0reverse_frame_2 - 0.86 9.5 6.4 0.25 11.2 2.7 1.8 1 1 1 2 2 2 0 Bunyavirus non-structural protein NS-s DUF846 PF05832.12 NODE_48191_length_393_cov_320.178771_g40319_i0forward_frame_2 - 6.3e-25 87.8 4.6 8.3e-25 87.4 4.6 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) VirB3 PF05101.13 NODE_48191_length_393_cov_320.178771_g40319_i0forward_frame_2 - 0.035 14.3 0.7 0.048 13.9 0.7 1.2 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF3592 PF12158.8 NODE_48191_length_393_cov_320.178771_g40319_i0forward_frame_2 - 0.092 12.8 0.4 1.9 8.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3592) Glycolytic PF00274.19 NODE_48183_length_393_cov_4813.321229_g40311_i0reverse_frame_2 - 3.3e-05 22.8 0.2 5.1e-05 22.2 0.2 1.3 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Pox_RNA_Pol_19 PF05320.12 ORF99719 - 0.054 13.5 0.1 0.062 13.3 0.1 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit ADP_ribosyl_GH PF03747.14 ORF99537 - 1.8e-14 54.1 0.0 2.8e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Herpes_U47 PF05467.11 ORF98865 - 0.23 9.6 0.0 0.28 9.3 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 Histone_H2A_C PF16211.5 ORF96525 - 2.6e-16 59.1 0.1 4.1e-16 58.4 0.1 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 ORF96525 - 5.9e-15 55.8 0.0 7e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF96525 - 8.5e-06 26.0 0.0 1.3e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Cytochrom_B_C PF00032.17 ORF94626 - 0.068 13.5 0.1 0.091 13.1 0.1 1.3 1 0 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD DUF2615 PF11027.8 ORF94626 - 0.072 13.2 4.1 0.19 11.9 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2615) Bacteriocin_II PF01721.18 ORF9436 - 0.12 12.5 0.3 0.24 11.5 0.3 1.5 1 0 0 1 1 1 0 Class II bacteriocin Cytochrom_B_C PF00032.17 ORF93900 - 0.068 13.5 0.1 0.091 13.1 0.1 1.3 1 0 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD DUF2615 PF11027.8 ORF93900 - 0.072 13.2 4.1 0.19 11.9 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2615) FOP_dimer PF09398.10 ORF92033 - 1.4e-10 41.3 0.1 2.5e-10 40.5 0.1 1.4 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF92033 - 1.3e-06 27.3 0.1 2.1e-06 26.6 0.1 1.4 1 0 0 1 1 1 1 LisH EnY2 PF10163.9 ORF92033 - 0.1 13.0 0.1 2.1 8.8 0.0 2.0 1 1 1 2 2 2 0 Transcription factor e(y)2 SatD PF16264.5 ORF91680 - 0.0012 18.5 0.8 0.0023 17.6 0.8 1.4 1 0 0 1 1 1 1 SatD family (SatD) 4HB_MCP_1 PF12729.7 ORF91680 - 0.077 12.5 10.0 1.2 8.6 7.8 2.1 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction DUF4994 PF16385.5 ORF91680 - 0.11 12.4 2.9 0.21 11.5 2.9 1.4 1 0 0 1 1 1 0 Domain of unknown function RE_CfrBI PF09516.10 ORF91680 - 0.12 11.8 8.3 0.14 11.5 8.3 1.0 1 0 0 1 1 1 0 CfrBI restriction endonuclease NigD_C PF17415.2 ORF91680 - 0.2 11.7 5.5 0.33 11.0 5.5 1.4 1 0 0 1 1 1 0 NigD-like C-terminal beta sandwich domain DUF1779 PF08680.10 ORF91680 - 0.24 11.6 8.0 0.54 10.4 7.5 1.6 1 1 1 2 2 2 0 TATA-box binding PIN_8 PF18476.1 ORF91680 - 0.24 11.2 12.7 0.43 10.4 12.7 1.5 1 1 0 1 1 1 0 PIN like domain PDCD2_C PF04194.13 ORF91680 - 0.29 11.2 5.1 0.42 10.7 5.1 1.2 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain MYO10_CC PF16735.5 ORF91680 - 2.4 8.3 13.1 2.7 8.1 5.5 2.4 2 0 0 2 2 2 0 Unconventional myosin-X coiled coil domain Cadherin_C_2 PF16492.5 ORF89273 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF89273 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF89273 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF89273 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE BOF PF04076.13 ORF88202 - 1.6e-47 159.8 1.3 1.9e-47 159.5 1.3 1.1 1 0 0 1 1 1 1 Bacterial OB fold (BOF) protein Dpy-30 PF05186.13 ORF88167 - 0.1 12.3 0.0 1.2 8.8 0.0 2.1 2 0 0 2 2 2 0 Dpy-30 motif Prefoldin_2 PF01920.20 ORF88145 - 1.7e-19 69.7 16.9 2.3e-19 69.3 16.9 1.2 1 0 0 1 1 1 1 Prefoldin subunit DUF1664 PF07889.12 ORF88145 - 0.029 14.4 3.2 0.029 14.4 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF88145 - 0.033 14.6 1.7 0.033 14.6 1.7 3.2 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) SpoVT_C PF15714.5 ORF88145 - 0.035 14.2 1.0 0.035 14.2 1.0 2.1 1 1 1 2 2 2 0 Stage V sporulation protein T C-terminal, transcription factor SKA2 PF16740.5 ORF88145 - 0.049 13.4 12.7 0.27 11.0 1.7 2.2 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 ING PF12998.7 ORF88145 - 0.14 12.8 10.3 0.22 12.1 0.8 2.2 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding FIVAR PF07554.13 ORF88145 - 0.35 11.6 7.5 1.9 9.3 2.1 3.1 2 1 0 2 2 2 0 FIVAR domain Syntaxin_2 PF14523.6 ORF88145 - 0.52 10.7 13.9 0.11 12.8 3.2 2.2 1 1 1 2 2 2 0 Syntaxin-like protein Spectrin PF00435.21 ORF88145 - 0.8 10.2 15.3 1.7 9.2 5.7 2.4 2 1 0 2 2 2 0 Spectrin repeat Prefoldin PF02996.17 ORF88145 - 0.82 9.6 16.3 1.7e+02 2.1 16.3 2.5 1 1 0 1 1 1 0 Prefoldin subunit DUF737 PF05300.11 ORF88145 - 0.84 10.0 18.3 1 9.7 18.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Fzo_mitofusin PF04799.13 ORF88145 - 0.98 8.9 13.3 0.41 10.2 2.7 2.1 2 0 0 2 2 2 0 fzo-like conserved region MCPsignal PF00015.21 ORF88145 - 1 9.1 9.7 0.35 10.7 2.6 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Rx_N PF18052.1 ORF88145 - 1.2 9.5 11.9 0.16 12.3 0.9 2.2 1 1 1 2 2 2 0 Rx N-terminal domain ABC_tran_CTD PF16326.5 ORF88145 - 1.4 9.2 16.1 0.76 10.1 3.7 2.4 2 0 0 2 2 2 0 ABC transporter C-terminal domain Peptidase_S46 PF10459.9 ORF88145 - 1.8 7.1 11.7 1.9 7.0 11.7 1.0 1 0 0 1 1 1 0 Peptidase S46 Nsp1_C PF05064.13 ORF88145 - 2.6 7.9 14.0 0.19 11.6 2.0 2.2 1 1 1 2 2 2 0 Nsp1-like C-terminal region UPF0242 PF06785.11 ORF88145 - 3.5 7.7 16.7 5.1 7.1 16.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Osmo_CC PF08946.10 ORF88145 - 4.5 7.6 12.3 2.7 8.3 2.9 3.1 2 2 0 2 2 2 0 Osmosensory transporter coiled coil DHR10 PF18595.1 ORF88145 - 4.8 7.3 20.5 3.1 7.9 8.4 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF641 PF04859.12 ORF88145 - 4.9 7.5 15.5 42 4.5 14.0 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) LCIB_C_CA PF18599.1 ORF88145 - 5.3 6.3 10.5 1 8.6 1.5 2.0 1 1 1 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases Spc24 PF08286.11 ORF88145 - 6.3 7.1 13.8 6.2 7.1 2.6 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF88145 - 7.3 7.0 18.8 2.9 8.2 3.4 3.0 2 1 1 3 3 3 0 Tup N-terminal Atg14 PF10186.9 ORF88145 - 9.2 5.2 10.7 19 4.2 10.8 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Ribosomal_L20 PF00453.18 ORF86862 - 8e-30 103.1 0.6 1e-29 102.8 0.6 1.1 1 0 0 1 1 1 1 Ribosomal protein L20 BRCT_2 PF16589.5 ORF86382 - 0.07 13.5 0.2 0.086 13.3 0.2 1.5 1 1 0 1 1 1 0 BRCT domain, a BRCA1 C-terminus domain DUF1556 PF07590.11 ORF8488 - 0.017 15.4 0.8 0.028 14.7 0.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1556) DUF4805 PF16063.5 ORF84705 - 0.017 14.5 0.8 0.017 14.5 0.8 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4805) TPR_17 PF13431.6 ORF84330 - 0.0027 18.0 0.1 0.79 10.2 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TetR_C_28 PF17937.1 ORF83529 - 0.1 13.0 1.4 0.75 10.3 0.1 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Acid_PPase PF12689.7 ORF82841 - 0.015 15.1 0.0 0.025 14.4 0.0 1.4 1 1 0 1 1 1 0 Acid Phosphatase TMEM208_SND2 PF05620.11 ORF82841 - 0.057 13.2 2.6 0.071 12.9 2.6 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 PspC PF04024.12 ORF82654 - 4.7 7.1 8.4 12 5.8 8.4 1.6 1 0 0 1 1 1 0 PspC domain S1 PF00575.23 ORF82019 - 0.13 12.7 1.5 2.9 8.3 0.0 2.1 2 0 0 2 2 2 0 S1 RNA binding domain zf-B_box PF00643.24 ORF81352 - 0.13 12.4 13.1 0.26 11.5 13.1 1.5 1 0 0 1 1 1 0 B-box zinc finger DUF4656 PF15551.6 ORF79616 - 3.2 7.2 5.4 4.1 6.8 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) ADP_ribosyl_GH PF03747.14 ORF76496 - 2.8e-14 53.5 0.0 3.5e-14 53.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase FAM177 PF14774.6 ORF76 - 0.078 13.4 1.6 4.4 7.7 0.1 2.1 2 0 0 2 2 2 0 FAM177 family DUF3397 PF11877.8 ORF71202 - 0.071 13.3 0.6 0.1 12.8 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3397) Phage_TAC_3 PF06896.11 ORF71179 - 0.032 14.8 2.0 0.051 14.2 2.0 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone proteins, TAC 5-FTHF_cyc-lig PF01812.20 ORF69740 - 4.1e-21 75.7 0.0 4.9e-21 75.4 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Cadherin_C_2 PF16492.5 ORF68591 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF68591 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF68591 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF68591 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE RepC PF06504.11 ORF68197 - 0.034 13.4 0.1 0.038 13.2 0.1 1.1 1 0 0 1 1 1 0 Replication protein C (RepC) DOR PF14839.6 ORF68197 - 0.37 10.7 2.0 0.45 10.4 1.7 1.2 1 1 0 1 1 1 0 DOR family Cys_box PF17869.1 ORF68058 - 0.2 11.8 2.9 1.1 9.4 0.1 2.2 2 0 0 2 2 2 0 Anosmin cysteine rich domain Neurokinin_B PF03823.14 ORF67959 - 0.33 11.0 0.0 0.33 11.0 0.0 1.8 2 0 0 2 2 2 0 Neurokinin B DUF819 PF05684.12 ORF67517 - 0.067 12.2 0.7 0.079 12.0 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF819) DUF2160 PF09928.9 ORF67465 - 0.12 12.7 0.1 0.19 12.1 0.1 1.5 1 1 0 1 1 1 0 Predicted small integral membrane protein (DUF2160) A_deamin PF02137.18 ORF66237 - 0.065 12.7 0.1 0.081 12.4 0.1 1.1 1 0 0 1 1 1 0 Adenosine-deaminase (editase) domain HGAL PF15666.5 ORF6487 - 0.017 15.2 0.1 0.032 14.3 0.1 1.4 1 0 0 1 1 1 0 Germinal center-associated lymphoma Rad21_Rec8_N PF04825.13 ORF6487 - 0.019 15.1 3.5 0.051 13.8 3.5 1.7 1 1 0 1 1 1 0 N terminus of Rad21 / Rec8 like protein Peptidase_U4 PF03419.13 ORF64278 - 1 8.6 6.8 1.4 8.2 6.8 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA XAP5 PF04921.14 ORF63448 - 5.5e-08 32.9 1.0 1e-07 32.1 1.0 1.4 1 1 0 1 1 1 1 XAP5, circadian clock regulator LINES_C PF14695.6 ORF63448 - 0.26 10.8 2.5 0.39 10.2 0.8 2.0 1 1 1 2 2 2 0 Lines C-terminus AID PF18767.1 ORF63254 - 0.098 12.7 1.9 0.16 12.0 1.9 1.4 1 0 0 1 1 1 0 Activation induced deaminase Pox_RNA_Pol_19 PF05320.12 ORF62894 - 0.054 13.5 0.1 0.062 13.3 0.1 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit Bunya_NS-S PF01104.17 ORF60747 - 0.8 9.6 11.0 0.047 13.5 4.8 1.9 1 1 1 2 2 2 0 Bunyavirus non-structural protein NS-s CENP-F_leu_zip PF10473.9 ORF60361 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF60361 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF60361 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF60361 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF60361 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF60361 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF60361 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF60361 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF60361 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF60361 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF60361 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF60361 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF60361 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF60361 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF60361 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF60361 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF60361 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF60361 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF60361 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF60361 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF60361 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF60361 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF60361 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF60361 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF60361 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF60361 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF60361 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF60361 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF60361 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF60361 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF60361 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF60361 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF60361 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF60361 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF60361 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF60361 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF60361 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF60361 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain Ank_4 PF13637.6 ORF59950 - 7.3e-14 51.9 0.1 1.6e-05 25.3 0.0 2.4 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF59950 - 1.3e-13 51.3 0.0 1.8e-13 50.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF59950 - 4.2e-12 45.1 0.1 0.00042 20.5 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF59950 - 5.7e-12 45.6 0.0 0.00047 20.4 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF59950 - 2e-07 31.1 0.0 0.066 13.7 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat HTH_21 PF13276.6 ORF59950 - 0.02 15.0 0.0 0.078 13.1 0.0 1.9 1 1 0 1 1 1 0 HTH-like domain RNase_J_C PF17770.1 ORF5900 - 1.7 9.8 6.8 1.1 10.4 0.6 2.2 1 1 1 2 2 2 0 Ribonuclease J C-terminal domain Cadherin_C_2 PF16492.5 ORF58757 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF58757 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF58757 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF58757 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE SWI-SNF_Ssr4 PF08549.10 ORF58740 - 0.0085 14.8 0.1 0.0085 14.8 0.1 1.1 1 0 0 1 1 1 1 Fungal domain of unknown function (DUF1750) Mg_chelatase_C PF13335.6 ORF57736 - 0.011 16.4 0.2 0.02 15.5 0.2 1.7 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI C-terminal Ndr PF03096.14 ORF57736 - 0.1 11.3 2.3 0.13 11.0 2.3 1.1 1 0 0 1 1 1 0 Ndr family ABC_tran PF00005.27 ORF56417 - 2.2e-08 34.7 0.2 3.8e-08 33.9 0.0 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF56417 - 1.3e-05 24.8 0.3 1.6e-05 24.4 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DDRGK PF09756.9 ORF56417 - 0.025 14.2 0.3 0.033 13.8 0.3 1.2 1 0 0 1 1 1 0 DDRGK domain PRMT5_C PF17286.2 ORF55930 - 0.099 12.5 0.6 0.12 12.2 0.6 1.1 1 0 0 1 1 1 0 PRMT5 oligomerisation domain Prefoldin_2 PF01920.20 ORF53650 - 1.5e-11 44.2 1.2 1.7e-11 44.0 1.2 1.1 1 0 0 1 1 1 1 Prefoldin subunit Rx_N PF18052.1 ORF53650 - 0.024 14.9 0.8 0.067 13.5 0.4 1.8 2 0 0 2 2 2 0 Rx N-terminal domain DUF5317 PF17248.2 ORF528 - 0.82 9.7 5.1 0.63 10.0 1.5 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5317) GPW_gp25 PF04965.14 ORF52253 - 1.4e-11 44.0 0.0 1.8e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Gene 25-like lysozyme SPT_ssu-like PF11779.8 ORF50981 - 0.19 11.3 6.0 0.54 9.9 2.2 2.3 2 0 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like HECW1_helix PF18436.1 ORF50414 - 0.14 12.3 0.0 0.34 11.1 0.0 1.6 2 0 0 2 2 2 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 IBR PF01485.21 ORF49880 - 0.18 12.1 12.6 0.11 12.8 4.9 2.8 3 0 0 3 3 3 0 IBR domain, a half RING-finger domain DUF2207 PF09972.9 ORF49880 - 0.21 10.3 1.4 0.23 10.2 1.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-RING_4 PF14570.6 ORF49880 - 3.9 7.3 9.4 3.3 7.6 4.4 2.6 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain FleQ PF06490.11 ORF4952 - 0.13 12.7 0.0 0.27 11.6 0.0 1.4 1 1 0 1 1 1 0 Flagellar regulatory protein FleQ CENP-F_leu_zip PF10473.9 ORF48936 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF48936 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF48936 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF48936 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF48936 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF48936 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF48936 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF48936 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF48936 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF48936 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF48936 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF48936 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF48936 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF48936 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF48936 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF48936 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF48936 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF48936 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF48936 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF48936 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF48936 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF48936 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF48936 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF48936 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF48936 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF48936 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF48936 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF48936 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF48936 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF48936 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF48936 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF48936 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF48936 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF48936 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF48936 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF48936 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF48936 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF48936 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain SPK PF04435.18 ORF47417 - 0.01 16.2 0.0 0.012 16.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF545) DUF4640 PF15480.6 ORF47328 - 0.051 13.3 0.8 0.061 13.1 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4640) DsrH PF04077.12 ORF46987 - 4e-29 100.6 0.0 4.9e-29 100.3 0.0 1.1 1 0 0 1 1 1 1 DsrH like protein TnsD PF15978.5 ORF44055 - 0.086 11.8 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D IFT81_CH PF18383.1 ORF42783 - 0.071 13.4 4.1 0.096 13.0 4.1 1.3 1 0 0 1 1 1 0 Intraflagellar transport 81 calponin homology domain SRF-TF PF00319.18 ORF42783 - 0.086 12.3 0.1 5.4 6.6 0.0 2.3 2 0 0 2 2 2 0 SRF-type transcription factor (DNA-binding and dimerisation domain) Lectin_C_term PF18022.1 ORF42783 - 0.11 13.0 0.7 0.54 10.7 0.2 2.0 1 1 1 2 2 2 0 Ricin-type beta-trefoil lectin C-terminal domain Syntaxin-6_N PF09177.11 ORF42783 - 0.24 12.0 5.2 0.36 11.4 5.2 1.2 1 0 0 1 1 1 0 Syntaxin 6, N-terminal DivIC PF04977.15 ORF42783 - 0.47 10.3 5.6 0.9 9.4 5.6 1.6 1 0 0 1 1 1 0 Septum formation initiator SlyX PF04102.12 ORF42783 - 0.88 10.2 7.8 0.67 10.6 4.7 2.0 1 1 1 2 2 2 0 SlyX YabA PF06156.13 ORF42783 - 1.4 9.6 10.2 0.84 10.3 7.4 1.8 1 1 1 2 2 2 0 Initiation control protein YabA AID PF18767.1 ORF4258 - 0.098 12.7 1.9 0.16 12.0 1.9 1.4 1 0 0 1 1 1 0 Activation induced deaminase Viral_DNA_bp PF00747.17 ORF40845 - 0.31 8.2 1.2 0.36 7.9 1.2 1.0 1 0 0 1 1 1 0 ssDNA binding protein DUF4735 PF15882.5 ORF39890 - 0.18 11.2 2.5 0.24 10.8 2.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4735) DUF5526 PF17664.1 ORF39711 - 0.033 13.7 0.1 0.042 13.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5526) Ribosomal_L27A PF00828.19 ORF39583 - 6.4e-13 49.5 0.4 6.4e-13 49.5 0.4 1.6 2 0 0 2 2 2 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HCV_NS4a PF01006.20 ORF39426 - 0.012 15.4 0.6 0.018 14.8 0.1 1.6 2 0 0 2 2 2 0 Hepatitis C virus non-structural protein NS4a zf-C3HC4_5 PF17121.5 ORF39406 - 0.00033 20.5 3.1 0.072 13.0 1.0 2.4 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF39406 - 0.32 10.8 6.8 5.7 6.8 0.2 2.3 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RING_5 PF14634.6 ORF39406 - 0.62 10.1 10.8 11 6.1 7.1 2.6 2 1 0 2 2 2 0 zinc-RING finger domain DUF3844 PF12955.7 ORF37805 - 0.11 12.7 0.8 0.51 10.5 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3844) DUF1462 PF07315.11 ORF37612 - 0.099 12.9 0.4 0.17 12.1 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1462) DUF1068 PF06364.12 ORF37612 - 0.11 12.3 1.0 0.14 12.0 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) FAM72 PF14976.6 ORF37020 - 0.024 14.8 1.0 0.032 14.4 1.0 1.2 1 0 0 1 1 1 0 FAM72 protein CENP-F_leu_zip PF10473.9 ORF36776 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF36776 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF36776 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF36776 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF36776 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF36776 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF36776 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF36776 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF36776 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF36776 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF36776 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF36776 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF36776 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF36776 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF36776 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF36776 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF36776 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF36776 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF36776 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF36776 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF36776 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF36776 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF36776 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF36776 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF36776 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF36776 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF36776 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF36776 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF36776 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF36776 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF36776 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF36776 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF36776 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF36776 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF36776 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF36776 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF36776 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF36776 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain KASH PF10541.9 ORF36356 - 0.13 12.6 4.0 0.11 12.8 2.7 1.6 1 1 0 1 1 1 0 Nuclear envelope localisation domain DUF1367 PF07105.11 ORF35840 - 0.075 12.7 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1367) DUF1053 PF06327.14 ORF34774 - 0.048 14.2 0.5 0.068 13.7 0.5 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1053) Cadherin_C_2 PF16492.5 ORF34496 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF34496 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF34496 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF34496 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE KAR9 PF08580.10 ORF34172 - 0.18 10.3 3.8 0.19 10.3 3.8 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 T4-Gluco-transf PF09198.10 ORF33027 - 4.9 6.9 5.4 0.94 9.1 0.8 2.0 2 0 0 2 2 2 0 Bacteriophage T4 beta-glucosyltransferase AID PF18767.1 ORF3183 - 0.098 12.7 1.9 0.16 12.0 1.9 1.4 1 0 0 1 1 1 0 Activation induced deaminase Peptidase_S68 PF10461.9 ORF31784 - 7.9 6.8 8.9 13 6.1 0.7 2.5 2 0 0 2 2 2 0 Peptidase S68 CENP-F_leu_zip PF10473.9 ORF31621 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF31621 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF31621 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF31621 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF31621 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF31621 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF31621 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF31621 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF31621 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF31621 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF31621 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF31621 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF31621 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF31621 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF31621 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF31621 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF31621 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF31621 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF31621 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF31621 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF31621 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF31621 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF31621 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF31621 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF31621 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF31621 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF31621 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF31621 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF31621 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF31621 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF31621 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF31621 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF31621 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF31621 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF31621 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF31621 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF31621 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF31621 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain UCMA PF17085.5 ORF31583 - 0.094 12.7 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Unique cartilage matrix associated protein Cadherin_C_2 PF16492.5 ORF27362 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF27362 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF27362 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF27362 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE Ribosomal_S9 PF00380.19 ORF25851 - 6.6e-47 159.0 1.4 7.5e-47 158.8 1.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Flg_hook PF02120.16 ORF25851 - 0.13 12.1 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK Methyltransf_23 PF13489.6 ORF25449 - 0.063 13.1 0.0 0.078 12.8 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain CENP-F_leu_zip PF10473.9 ORF23771 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF23771 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF23771 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF23771 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF23771 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF23771 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF23771 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF23771 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF23771 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF23771 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF23771 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF23771 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF23771 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF23771 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF23771 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF23771 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF23771 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF23771 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF23771 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF23771 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF23771 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF23771 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF23771 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF23771 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF23771 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF23771 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF23771 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF23771 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF23771 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF23771 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF23771 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF23771 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF23771 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF23771 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF23771 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF23771 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF23771 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF23771 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain zf-C3Hc3H PF13891.6 ORF23505 - 0.023 15.0 0.3 0.045 14.1 0.3 1.5 1 0 0 1 1 1 0 Potential DNA-binding domain YoaP PF14268.6 ORF23156 - 0.015 14.8 0.4 0.14 11.7 0.0 2.1 2 0 0 2 2 2 0 YoaP-like Bacteriocin_II PF01721.18 ORF21646 - 0.12 12.5 0.3 0.24 11.5 0.3 1.5 1 0 0 1 1 1 0 Class II bacteriocin TAP42 PF04177.12 ORF21558 - 1.3e-13 50.7 9.0 1.4e-13 50.7 9.0 1.1 1 0 0 1 1 1 1 TAP42-like family Paf1 PF03985.13 ORF21558 - 0.046 12.7 7.4 0.053 12.5 7.4 1.0 1 0 0 1 1 1 0 Paf1 RR_TM4-6 PF06459.12 ORF21558 - 0.048 13.5 4.9 0.052 13.4 4.9 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 ICAM_N PF03921.14 ORF20684 - 0.047 13.4 1.7 0.068 12.9 1.7 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain HC2 PF07382.11 ORF19717 - 0.3 11.1 2.6 0.4 10.7 2.6 1.1 1 0 0 1 1 1 0 Histone H1-like nucleoprotein HC2 SMP_LBD PF17047.5 ORF19332 - 0.015 14.8 0.2 0.017 14.6 0.2 1.2 1 0 0 1 1 1 0 Synaptotagmin-like mitochondrial-lipid-binding domain AID PF18767.1 ORF19261 - 0.098 12.7 1.9 0.16 12.0 1.9 1.4 1 0 0 1 1 1 0 Activation induced deaminase ABC_tran PF00005.27 ORF19135 - 2.1e-08 34.8 0.0 3.8e-08 33.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF19135 - 7.4e-06 25.6 0.3 8.9e-06 25.3 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DDRGK PF09756.9 ORF19135 - 0.0081 15.8 0.4 0.011 15.4 0.4 1.2 1 0 0 1 1 1 1 DDRGK domain CENP-F_leu_zip PF10473.9 ORF18138 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF18138 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF18138 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF18138 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF18138 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF18138 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF18138 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF18138 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF18138 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF18138 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF18138 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF18138 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF18138 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF18138 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF18138 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF18138 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF18138 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF18138 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF18138 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF18138 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF18138 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF18138 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF18138 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF18138 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF18138 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF18138 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF18138 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF18138 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF18138 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF18138 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF18138 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF18138 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF18138 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF18138 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF18138 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF18138 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF18138 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF18138 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain DUF2486 PF10667.9 ORF17576 - 0.016 15.5 0.2 0.025 14.8 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2486) AA_permease PF00324.21 ORF17573 - 1.6e-11 43.5 4.8 1.9e-11 43.3 4.8 1.1 1 0 0 1 1 1 1 Amino acid permease DUF996 PF06195.13 ORF17573 - 0.0016 18.7 1.0 0.0019 18.5 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF996) YwiC PF14256.6 ORF17573 - 0.083 13.2 7.8 0.095 13.0 7.3 1.3 1 1 0 1 1 1 0 YwiC-like protein LPAM_1 PF08139.12 ORF17573 - 0.37 11.4 0.1 0.37 11.4 0.1 3.8 4 0 0 4 4 4 0 Prokaryotic membrane lipoprotein lipid attachment site DUF1129 PF06570.11 ORF17573 - 0.68 9.4 3.4 0.81 9.1 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Cadherin_C_2 PF16492.5 ORF17328 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF17328 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF17328 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF17328 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE SCRL PF06876.12 ORF16927 - 0.29 11.4 3.2 3 8.1 0.5 2.2 2 0 0 2 2 2 0 Plant self-incompatibility response (SCRL) protein V-set PF07686.17 ORF152543 - 0.059 13.5 0.0 0.095 12.9 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin V-set domain DUF1764 PF08576.10 ORF152458 - 3.3e-21 76.0 11.3 3.3e-21 76.0 11.3 2.0 1 1 1 2 2 2 1 Eukaryotic protein of unknown function (DUF1764) CDC27 PF09507.10 ORF152458 - 0.31 10.4 19.4 0.35 10.2 19.4 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 PaREP1 PF05942.11 ORF152458 - 1.2 9.1 12.0 0.12 12.4 2.6 2.1 1 1 1 2 2 2 0 Archaeal PaREP1/PaREP8 family SpoVR PF04293.13 ORF152458 - 3.8 6.1 11.0 4.8 5.8 11.0 1.0 1 0 0 1 1 1 0 SpoVR like protein XRN_M PF17846.1 ORF152458 - 6.5 5.6 12.2 7.6 5.4 12.2 1.0 1 0 0 1 1 1 0 Xrn1 helical domain Band_3_cyto PF07565.13 ORF152458 - 9.1 6.0 11.4 12 5.7 11.4 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain CENP-F_leu_zip PF10473.9 ORF151579 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF151579 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF151579 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF151579 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF151579 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF151579 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF151579 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF151579 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF151579 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF151579 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF151579 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF151579 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF151579 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF151579 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF151579 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF151579 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF151579 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF151579 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF151579 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF151579 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF151579 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF151579 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF151579 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF151579 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF151579 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF151579 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF151579 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF151579 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF151579 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF151579 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF151579 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF151579 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF151579 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF151579 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF151579 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF151579 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF151579 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF151579 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain zf-C3H2C3 PF17122.5 ORF150795 - 0.061 13.4 1.2 0.14 12.2 1.2 1.7 1 0 0 1 1 1 0 Zinc-finger ADP_ribosyl_GH PF03747.14 ORF150656 - 2.7e-14 53.6 0.0 3.5e-14 53.2 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase LapA_dom PF06305.11 ORF150427 - 0.32 10.8 0.1 0.32 10.8 0.1 2.0 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain SAM_Exu PF18609.1 ORF149368 - 0.017 15.2 0.1 3.9 7.6 0.0 2.1 2 0 0 2 2 2 0 Exuperantia SAM-like domain Clathrin_bdg PF15045.6 ORF149368 - 0.11 12.4 3.7 0.68 10.0 0.0 2.2 2 0 0 2 2 2 0 Clathrin-binding box of Aftiphilin, vesicle trafficking Dockerin_1 PF00404.18 ORF149368 - 0.12 12.6 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Dockerin type I domain ALF PF03752.13 ORF149319 - 0.063 13.3 2.6 1.4 9.0 0.7 2.3 2 0 0 2 2 2 0 Short repeats of unknown function Cadherin_C_2 PF16492.5 ORF148988 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF148988 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF148988 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF148988 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE HGAL PF15666.5 ORF148804 - 0.017 15.2 0.1 0.032 14.3 0.1 1.4 1 0 0 1 1 1 0 Germinal center-associated lymphoma Rad21_Rec8_N PF04825.13 ORF148804 - 0.019 15.1 3.5 0.051 13.8 3.5 1.7 1 1 0 1 1 1 0 N terminus of Rad21 / Rec8 like protein DUF1778 PF08681.11 ORF148275 - 5.7e-19 67.8 2.6 7.6e-19 67.4 2.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1778) Med5 PF08689.10 ORF148275 - 0.041 11.7 0.0 0.041 11.7 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit Med5 Condensation PF00668.20 ORF148275 - 0.07 11.8 0.1 0.15 10.7 0.0 1.5 1 1 1 2 2 2 0 Condensation domain Attractin PF08037.11 ORF14635 - 0.019 14.9 0.1 0.031 14.3 0.1 1.3 1 0 0 1 1 1 0 Attractin family Sigma_M_inh PF17453.2 ORF144924 - 0.33 11.4 4.9 5.4 7.5 0.7 2.1 1 1 1 2 2 2 0 Sigma-M inhibitor Sec62 PF03839.16 ORF144744 - 4.5 6.7 9.2 2.5 7.5 1.3 2.1 2 0 0 2 2 2 0 Translocation protein Sec62 DUF4542 PF15075.6 ORF144590 - 0.1 13.0 0.1 0.27 11.6 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4542) CENP-F_leu_zip PF10473.9 ORF143754 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF143754 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF143754 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF143754 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF143754 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF143754 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF143754 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF143754 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF143754 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF143754 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF143754 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF143754 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF143754 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF143754 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF143754 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF143754 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF143754 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF143754 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF143754 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF143754 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF143754 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF143754 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF143754 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF143754 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF143754 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF143754 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF143754 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF143754 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF143754 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF143754 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF143754 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF143754 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF143754 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF143754 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF143754 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF143754 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF143754 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF143754 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain PilZ_2 PF16823.5 ORF143633 - 0.028 14.6 0.4 0.049 13.8 0.1 1.6 1 1 0 1 1 1 0 Atypical PilZ domain, cyclic di-GMP receptor Adeno_PV PF03910.13 ORF143633 - 0.054 12.2 4.8 0.061 12.0 4.8 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV FSA_C PF10479.9 ORF143633 - 3.1 5.8 5.3 3.3 5.7 5.3 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF3849 PF12960.7 ORF143394 - 0.0059 16.6 0.3 0.01 15.9 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3849) S1 PF00575.23 ORF143133 - 6.5e-11 42.4 0.4 9e-11 42.0 0.4 1.2 1 0 0 1 1 1 1 S1 RNA binding domain Phage_base_V PF04717.12 ORF143133 - 0.042 13.8 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector Peptidase_M3_N PF08439.10 ORF142815 - 0.12 12.7 0.4 0.12 12.7 0.4 1.9 3 0 0 3 3 3 0 Oligopeptidase F NPV_P10 PF05531.12 ORF142815 - 0.15 12.5 3.3 4.1 7.9 0.3 2.3 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein BLOC1_2 PF10046.9 ORF142815 - 0.32 11.3 11.0 29 5.0 9.7 2.7 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DASH_Dam1 PF08653.10 ORF142815 - 0.76 9.6 3.4 1.4 8.8 0.7 2.3 2 0 0 2 2 2 0 DASH complex subunit Dam1 DUF1664 PF07889.12 ORF142815 - 1.1 9.4 8.2 0.33 11.0 3.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) CC2-LZ PF16516.5 ORF142815 - 2.2 8.7 10.7 2.1 8.8 4.1 2.2 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF724 PF05266.14 ORF142815 - 2.2 8.1 13.0 0.53 10.1 5.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Spc24 PF08286.11 ORF142815 - 4.2 7.7 12.5 2.4 8.4 4.0 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 APG6_N PF17675.1 ORF142815 - 4.2 7.9 11.8 9.8e+02 0.2 11.9 2.1 1 1 0 1 1 1 0 Apg6 coiled-coil region PAH PF02671.21 ORF142744 - 0.089 12.9 0.6 0.15 12.3 0.6 1.3 1 0 0 1 1 1 0 Paired amphipathic helix repeat DUF262 PF03235.14 ORF142744 - 0.11 12.6 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF262 TSNR_N PF04705.12 ORF142697 - 0.072 13.2 1.0 0.13 12.4 1.0 1.5 1 1 0 1 1 1 0 Thiostrepton-resistance methylase, N terminus Cadherin_C_2 PF16492.5 ORF142501 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF142501 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF142501 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF142501 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE zf-MYST PF17772.1 ORF142380 - 0.038 13.6 2.3 0.3 10.7 2.3 2.2 1 1 0 1 1 1 0 MYST family zinc finger domain DUF3342 PF11822.8 ORF142380 - 0.058 13.6 0.2 0.1 12.8 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) TMEM82 PF15816.5 ORF142260 - 0.072 12.1 6.4 0.052 12.5 5.2 1.4 1 1 0 1 1 1 0 Transmembrane protein 82 SH3_4 PF06347.13 ORF141562 - 0.11 12.3 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 Bacterial SH3 domain HAV_VP PF12944.7 ORF141126 - 0.18 11.8 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Hepatitis A virus viral protein VP ERbeta_N PF12497.8 ORF14107 - 3.1 7.6 10.6 2.6 7.9 1.2 2.6 1 1 2 3 3 3 0 Estrogen receptor beta DUF1455 PF07306.11 ORF140740 - 0.077 13.0 4.3 0.13 12.2 4.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1455) SbcCD_C PF13558.6 ORF140740 - 0.48 10.7 2.4 8.8 6.7 0.1 2.2 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit HGD-D PF06050.13 ORF140431 - 0.0033 17.2 0.1 0.004 17.0 0.1 1.0 1 0 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component FERM_N PF09379.10 ORF140431 - 0.0056 16.6 0.1 0.0083 16.0 0.1 1.4 1 0 0 1 1 1 1 FERM N-terminal domain Tctex-1 PF03645.13 ORF140431 - 0.032 14.4 0.3 0.058 13.6 0.3 1.3 1 1 0 1 1 1 0 Tctex-1 family ADP_PFK_GK PF04587.15 ORF140431 - 0.045 12.3 0.3 0.058 12.0 0.3 1.1 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region NKWYS PF10364.9 ORF140431 - 0.049 13.8 0.4 0.082 13.0 0.3 1.3 1 1 0 1 1 1 0 Putative capsular polysaccharide synthesis protein Elong_Iki1 PF10483.9 ORF140431 - 0.094 12.2 0.5 0.11 12.0 0.5 1.2 1 0 0 1 1 1 0 Elongator subunit Iki1 AAA PF00004.29 ORF140431 - 0.1 13.0 0.2 0.13 12.7 0.2 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CENP-F_leu_zip PF10473.9 ORF139742 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF139742 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF139742 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF139742 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF139742 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF139742 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF139742 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF139742 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF139742 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF139742 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF139742 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF139742 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF139742 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF139742 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF139742 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF139742 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF139742 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF139742 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF139742 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF139742 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF139742 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF139742 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF139742 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF139742 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF139742 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF139742 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF139742 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF139742 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF139742 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF139742 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF139742 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF139742 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF139742 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF139742 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF139742 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF139742 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF139742 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF139742 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain Pox_RNA_Pol_19 PF05320.12 ORF137725 - 0.054 13.5 0.1 0.062 13.3 0.1 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit CENP-F_leu_zip PF10473.9 ORF137421 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF137421 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF137421 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF137421 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF137421 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF137421 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF137421 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF137421 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF137421 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF137421 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF137421 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF137421 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF137421 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF137421 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF137421 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF137421 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF137421 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF137421 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF137421 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF137421 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF137421 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF137421 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF137421 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF137421 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF137421 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF137421 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF137421 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF137421 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF137421 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF137421 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF137421 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF137421 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF137421 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF137421 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF137421 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF137421 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF137421 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF137421 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain CENP-F_leu_zip PF10473.9 ORF136732 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF136732 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF136732 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF136732 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF136732 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF136732 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF136732 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF136732 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF136732 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF136732 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF136732 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF136732 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF136732 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF136732 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF136732 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF136732 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF136732 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF136732 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF136732 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF136732 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF136732 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF136732 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF136732 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF136732 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF136732 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF136732 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF136732 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF136732 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF136732 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF136732 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF136732 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF136732 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF136732 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF136732 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF136732 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF136732 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF136732 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF136732 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain PspC PF04024.12 ORF136471 - 4.7 7.1 8.4 12 5.8 8.4 1.6 1 0 0 1 1 1 0 PspC domain DUF1145 PF06611.12 ORF136252 - 7.6e-27 93.0 7.8 1.2e-26 92.4 7.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1145) DUF2678 PF10856.8 ORF136252 - 0.019 14.9 0.2 0.025 14.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) zf-MYST PF17772.1 ORF135372 - 0.038 13.6 2.3 0.3 10.7 2.3 2.2 1 1 0 1 1 1 0 MYST family zinc finger domain DUF3342 PF11822.8 ORF135372 - 0.058 13.6 0.2 0.1 12.8 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) SirB PF04247.12 ORF135365 - 8.7e-35 119.4 8.5 9.6e-35 119.3 8.5 1.0 1 0 0 1 1 1 1 Invasion gene expression up-regulator, SirB DUF5472 PF17566.2 ORF135365 - 0.069 13.1 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5472) DUF588 PF04535.12 ORF135365 - 0.081 12.7 0.1 0.081 12.7 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF588) NCD1 PF04904.13 ORF134516 - 0.24 11.4 1.8 2.4 8.2 0.2 2.6 2 1 1 3 3 3 0 NAB conserved region 1 (NCD1) Mitofilin PF09731.9 ORF133995 - 0.011 14.7 10.4 0.011 14.6 10.4 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Atg14 PF10186.9 ORF133995 - 0.014 14.5 9.7 0.023 13.8 9.7 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CLZ PF16526.5 ORF133995 - 0.018 15.4 8.7 0.036 14.4 4.5 2.4 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels SKA1 PF07160.12 ORF133995 - 0.026 14.4 8.6 0.054 13.3 8.6 1.5 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 1 ATG16 PF08614.11 ORF133995 - 0.029 14.6 9.3 1.5 9.0 9.2 2.6 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF4407 PF14362.6 ORF133995 - 0.038 13.3 5.7 0.058 12.7 5.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) KxDL PF10241.9 ORF133995 - 0.041 14.2 7.6 0.26 11.6 2.4 2.3 1 1 2 3 3 3 0 Uncharacterized conserved protein TetR_C_13 PF16925.5 ORF133995 - 0.051 13.5 0.3 0.14 12.1 0.1 1.7 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain CorA PF01544.18 ORF133995 - 0.077 12.3 7.8 0.1 11.9 7.8 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein FlaC_arch PF05377.11 ORF133995 - 0.081 13.3 6.2 3.3 8.2 0.7 2.9 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) AKNA PF12443.8 ORF133995 - 0.091 13.4 5.3 0.24 12.0 1.2 2.4 1 1 1 2 2 2 0 AT-hook-containing transcription factor Fib_alpha PF08702.10 ORF133995 - 0.12 12.6 11.7 0.31 11.2 4.8 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF133995 - 0.12 12.9 9.6 0.24 11.9 9.2 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 Terminase_4 PF05119.12 ORF133995 - 0.13 12.8 3.1 0.27 11.7 1.9 1.9 1 1 1 2 2 2 0 Phage terminase, small subunit Csm1_N PF18504.1 ORF133995 - 0.13 12.6 11.0 1.5 9.2 3.7 2.9 1 1 2 3 3 3 0 Csm1 N-terminal domain CR6_interact PF10147.9 ORF133995 - 0.18 11.5 10.7 0.21 11.3 10.7 1.1 1 0 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 Exonuc_VII_L PF02601.15 ORF133995 - 0.22 11.0 5.4 0.26 10.8 5.4 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Baculo_PEP_C PF04513.12 ORF133995 - 0.23 11.5 4.7 1 9.4 4.2 1.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus POX PF07526.11 ORF133995 - 0.25 11.9 4.5 0.29 11.7 4.5 1.1 1 0 0 1 1 1 0 Associated with HOX YtxH PF12732.7 ORF133995 - 0.26 11.8 6.6 5.8 7.5 0.6 2.2 1 1 1 2 2 2 0 YtxH-like protein DUF641 PF04859.12 ORF133995 - 0.49 10.7 7.8 0.42 11.0 5.4 2.1 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF1043 PF06295.12 ORF133995 - 0.62 10.1 5.6 0.65 10.0 4.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) TMPIT PF07851.13 ORF133995 - 0.67 9.1 9.1 0.98 8.6 9.1 1.4 1 1 0 1 1 1 0 TMPIT-like protein ZapB PF06005.12 ORF133995 - 0.95 10.0 9.5 4 8.0 9.5 2.1 1 1 0 1 1 1 0 Cell division protein ZapB DUF2205 PF10224.9 ORF133995 - 1.1 9.3 7.6 8.3 6.5 0.2 2.4 1 1 1 2 2 2 0 Short coiled-coil protein DUF1515 PF07439.11 ORF133995 - 1.2 9.2 5.8 1.2 9.2 3.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) DUF1664 PF07889.12 ORF133995 - 1.3 9.1 7.9 9.7 6.2 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 ORF133995 - 1.3 9.6 13.4 0.4 11.2 8.6 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region MRPL52 PF18699.1 ORF133995 - 1.6 9.0 9.6 3.2 8.0 4.1 2.2 1 1 2 3 3 3 0 Mitoribosomal protein mL52 DUF349 PF03993.12 ORF133995 - 1.8 8.9 8.6 1.5 9.2 6.8 1.9 1 1 0 1 1 1 0 Domain of Unknown Function (DUF349) Syntaxin-6_N PF09177.11 ORF133995 - 2.2 8.9 9.2 0.88 10.2 4.9 2.0 1 1 1 2 2 2 0 Syntaxin 6, N-terminal LMBR1 PF04791.16 ORF133995 - 2.5 6.9 5.7 2.7 6.8 5.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein PhoU PF01895.19 ORF133995 - 2.7 8.5 8.2 1.7 9.1 1.4 2.2 1 1 1 2 2 2 0 PhoU domain FAM76 PF16046.5 ORF133995 - 2.7 7.3 13.2 7.5 5.8 13.2 1.7 1 1 0 1 1 1 0 FAM76 protein DUF948 PF06103.11 ORF133995 - 3.2 8.1 6.2 26 5.2 6.2 2.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Cas6b_C PF17262.2 ORF133995 - 3.5 7.8 6.4 15 5.7 1.3 2.1 1 1 1 2 2 2 0 Cas6b C-terminal domain DivIC PF04977.15 ORF133995 - 4.5 7.1 9.6 3.9 7.3 3.1 2.8 1 1 2 3 3 3 0 Septum formation initiator Peptidase_C1 PF00112.23 ORF133717 - 1.8e-23 83.8 0.3 1.8e-23 83.8 0.3 1.4 1 1 1 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF133717 - 7.6e-05 21.7 0.1 9.7e-05 21.3 0.1 1.1 1 0 0 1 1 1 1 Peptidase C1-like family Vps36-NZF-N PF16988.5 ORF133717 - 0.2 11.1 0.9 0.29 10.5 0.9 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain DUF3381 PF11861.8 ORF133568 - 1.6e-08 34.5 1.1 2e-08 34.2 1.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3381) GAPT PF11770.8 ORF131006 - 0.058 13.3 7.4 0.071 13.0 7.4 1.1 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) RSB_motif PF16294.5 ORF131006 - 0.17 12.2 6.4 0.25 11.6 6.4 1.4 1 1 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif Pinin_SDK_memA PF04696.13 ORF131006 - 0.33 11.0 10.9 0.53 10.4 10.9 1.4 1 1 0 1 1 1 0 pinin/SDK/memA/ protein conserved region APH PF01636.23 ORF130939 - 0.004 17.1 0.6 0.0048 16.8 0.6 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family SGL PF08450.12 ORF130685 - 0.025 14.2 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 SMP-30/Gluconolactonase/LRE-like region Trs65 PF12735.7 ORF128805 - 0.023 14.1 0.5 0.027 13.9 0.5 1.1 1 0 0 1 1 1 0 TRAPP trafficking subunit Trs65 DUF4606 PF15379.6 ORF128805 - 0.04 14.1 4.8 0.055 13.7 4.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4606) UPF0086 PF01868.16 ORF128805 - 0.043 13.7 0.4 0.074 13.0 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function UPF0086 TIG_plexin PF17960.1 ORF128805 - 0.25 11.4 2.4 7.9 6.6 0.3 2.7 3 0 0 3 3 3 0 TIG domain GED PF02212.18 ORF12851 - 2.8e-12 46.6 6.0 3.5e-12 46.3 6.0 1.1 1 0 0 1 1 1 1 Dynamin GTPase effector domain Tweety PF04906.13 ORF12851 - 0.18 10.4 0.6 0.21 10.2 0.6 1.1 1 0 0 1 1 1 0 Tweety Ribosomal_S8 PF00410.19 ORF128422 - 4.4e-49 165.7 0.1 4.9e-49 165.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 CENP-F_leu_zip PF10473.9 ORF128327 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF128327 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF128327 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF128327 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF128327 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF128327 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF128327 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF128327 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF128327 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF128327 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF128327 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF128327 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF128327 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF128327 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF128327 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF128327 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF128327 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF128327 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF128327 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF128327 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF128327 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF128327 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF128327 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF128327 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF128327 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF128327 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF128327 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF128327 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF128327 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF128327 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF128327 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF128327 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF128327 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF128327 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF128327 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF128327 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF128327 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF128327 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain TMEM132 PF16070.5 ORF128302 - 0.055 12.8 0.0 0.069 12.5 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein family 132 AKAP95 PF04988.12 ORF128236 - 0.16 12.2 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) GP41 PF00517.17 ORF127751 - 0.023 14.6 0.1 0.029 14.3 0.1 1.1 1 0 0 1 1 1 0 Retroviral envelope protein CENP-F_leu_zip PF10473.9 ORF126700 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF126700 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF126700 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF126700 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF126700 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF126700 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF126700 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF126700 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF126700 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF126700 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF126700 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF126700 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF126700 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF126700 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF126700 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF126700 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF126700 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF126700 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF126700 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF126700 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF126700 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF126700 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF126700 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF126700 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF126700 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF126700 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF126700 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF126700 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF126700 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF126700 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF126700 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF126700 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF126700 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF126700 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF126700 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF126700 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF126700 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF126700 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain DiSB-ORF2_chro PF16506.5 ORF12657 - 0.01 15.9 1.9 0.09 12.8 0.5 2.2 2 0 0 2 2 2 1 Putative virion glycoprotein of insect viruses FANCD2OS PF15124.6 ORF126006 - 0.041 14.1 0.0 0.06 13.6 0.0 1.2 1 0 0 1 1 1 0 FANCD2 opposite strand protein CENP-F_leu_zip PF10473.9 ORF125897 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF125897 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF125897 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF125897 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF125897 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF125897 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF125897 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF125897 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF125897 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF125897 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF125897 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF125897 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF125897 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF125897 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF125897 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF125897 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF125897 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF125897 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF125897 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF125897 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF125897 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF125897 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF125897 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF125897 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF125897 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF125897 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF125897 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF125897 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF125897 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF125897 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF125897 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF125897 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF125897 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF125897 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF125897 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF125897 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF125897 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF125897 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain Ribosomal_S8 PF00410.19 ORF125530 - 1.3e-21 76.9 0.2 2.4e-21 76.0 0.2 1.4 1 1 0 1 1 1 1 Ribosomal protein S8 FAST_2 PF08368.12 ORF125530 - 0.16 12.7 0.3 8.2 7.3 0.0 2.6 3 0 0 3 3 3 0 FAST kinase-like protein, subdomain 2 DUF29 PF01724.16 ORF124390 - 0.07 13.4 0.1 0.091 13.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF29 HCV_NS4a PF01006.20 ORF124246 - 0.012 15.4 0.6 0.018 14.8 0.1 1.6 2 0 0 2 2 2 0 Hepatitis C virus non-structural protein NS4a Cadherin_C_2 PF16492.5 ORF124198 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF124198 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF124198 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF124198 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE E1-E2_ATPase PF00122.20 ORF124003 - 6.7 6.2 5.2 0.92 9.0 0.9 1.7 1 1 0 2 2 2 0 E1-E2 ATPase Ank_5 PF13857.6 ORF123923 - 7.3e-10 38.9 0.2 0.00018 21.7 0.0 2.9 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF123923 - 1e-07 32.4 0.2 5.9e-07 30.0 0.1 1.9 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF123923 - 4.9e-05 23.6 0.0 0.35 11.4 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF123923 - 0.0001 22.5 0.0 0.47 11.2 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF123923 - 0.0018 18.8 0.3 0.11 13.1 0.1 2.8 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Glyco_hydro_65m PF03632.15 ORF123678 - 0.052 12.4 0.0 0.063 12.1 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 65 central catalytic domain Thioredoxin_12 PF18400.1 ORF123581 - 0.046 13.6 0.0 0.055 13.3 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Glyoxal_oxid_N PF07250.11 ORF123513 - 0.0056 15.9 0.0 0.0065 15.7 0.0 1.1 1 0 0 1 1 1 1 Glyoxal oxidase N-terminus Cadherin_C_2 PF16492.5 ORF123373 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF123373 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF123373 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF123373 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE SIP1 PF04938.12 ORF123046 - 0.19 11.4 3.4 0.11 12.3 1.6 1.5 2 0 0 2 2 2 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) Cadherin_C_2 PF16492.5 ORF122409 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF122409 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF122409 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF122409 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE Cadherin_C_2 PF16492.5 ORF121838 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF121838 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF121838 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF121838 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE Swi3 PF07962.12 ORF121072 - 0.012 15.5 0.9 0.45 10.5 0.1 2.4 1 1 1 2 2 2 0 Replication Fork Protection Component Swi3 Phage_Gp111 PF07410.11 ORF121072 - 0.14 12.7 2.4 0.17 12.4 2.4 1.1 1 0 0 1 1 1 0 Streptococcus thermophilus bacteriophage Gp111 protein DUF983 PF06170.12 ORF120676 - 0.036 14.5 2.0 0.056 13.8 2.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF983) DctQ PF04290.12 ORF120676 - 0.091 12.7 5.6 0.14 12.1 5.6 1.3 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF4149 PF13664.6 ORF120676 - 0.42 10.9 4.1 0.57 10.5 3.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4149) PIG-Y PF15159.6 ORF120676 - 3 8.8 8.7 5.4 8.0 8.7 1.5 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF3139 PF11337.8 ORF120676 - 8.2 7.2 8.3 0.2 12.3 1.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) GWT1 PF06423.12 ORF120519 - 0.58 10.3 4.7 0.88 9.7 4.7 1.3 1 1 0 1 1 1 0 GWT1 Fungal_trans_2 PF11951.8 ORF12046 - 0.078 11.8 4.6 0.087 11.6 4.6 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain AID PF18767.1 ORF120183 - 0.098 12.7 1.9 0.16 12.0 1.9 1.4 1 0 0 1 1 1 0 Activation induced deaminase Peripla_BP_4 PF13407.6 ORF119530 - 3.8e-18 66.0 5.8 4.6e-18 65.7 5.8 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_3 PF13377.6 ORF119530 - 3.6e-05 24.2 0.3 4.2e-05 23.9 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF119530 - 0.00062 19.3 0.5 0.0008 18.9 0.5 1.2 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family DUF3804 PF12707.7 ORF118160 - 0.061 13.1 0.1 0.13 12.0 0.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3804) DUF4943 PF16301.5 ORF117697 - 0.017 15.1 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4943) EF-hand_1 PF00036.32 ORF11566 - 1.6e-11 42.9 0.8 4.3e-05 22.8 0.2 2.4 2 0 0 2 2 2 2 EF hand Ion_trans_2 PF07885.16 ORF11566 - 3.2e-11 43.0 3.8 4.7e-11 42.5 3.8 1.2 1 0 0 1 1 1 1 Ion channel EF-hand_7 PF13499.6 ORF11566 - 6.5e-10 39.3 0.1 1e-09 38.7 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF11566 - 6.5e-10 38.1 1.2 0.00043 20.0 0.2 2.7 1 1 2 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF11566 - 2.6e-08 33.6 0.1 0.0025 17.7 0.0 2.5 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF11566 - 0.00012 21.4 0.2 0.042 13.4 0.1 2.4 2 0 0 2 2 2 2 EF hand TMEM43 PF07787.12 ORF11566 - 0.08 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 Prefoldin_2 PF01920.20 ORF11485 - 1.7e-19 69.7 16.9 2.3e-19 69.3 16.9 1.2 1 0 0 1 1 1 1 Prefoldin subunit DUF1664 PF07889.12 ORF11485 - 0.029 14.4 3.2 0.029 14.4 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF11485 - 0.033 14.6 1.7 0.033 14.6 1.7 3.2 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) SpoVT_C PF15714.5 ORF11485 - 0.035 14.2 1.0 0.035 14.2 1.0 2.1 1 1 1 2 2 2 0 Stage V sporulation protein T C-terminal, transcription factor SKA2 PF16740.5 ORF11485 - 0.049 13.4 12.7 0.27 11.0 1.7 2.2 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 ING PF12998.7 ORF11485 - 0.14 12.8 10.3 0.22 12.1 0.8 2.2 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding FIVAR PF07554.13 ORF11485 - 0.35 11.6 7.5 1.9 9.3 2.1 3.1 2 1 0 2 2 2 0 FIVAR domain Syntaxin_2 PF14523.6 ORF11485 - 0.52 10.7 13.9 0.11 12.8 3.2 2.2 1 1 1 2 2 2 0 Syntaxin-like protein Spectrin PF00435.21 ORF11485 - 0.8 10.2 15.3 1.7 9.2 5.7 2.4 2 1 0 2 2 2 0 Spectrin repeat Prefoldin PF02996.17 ORF11485 - 0.82 9.6 16.3 1.7e+02 2.1 16.3 2.5 1 1 0 1 1 1 0 Prefoldin subunit DUF737 PF05300.11 ORF11485 - 0.84 10.0 18.3 1 9.7 18.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Fzo_mitofusin PF04799.13 ORF11485 - 0.98 8.9 13.3 0.41 10.2 2.7 2.1 2 0 0 2 2 2 0 fzo-like conserved region MCPsignal PF00015.21 ORF11485 - 1 9.1 9.7 0.35 10.7 2.6 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Rx_N PF18052.1 ORF11485 - 1.2 9.5 11.9 0.16 12.3 0.9 2.2 1 1 1 2 2 2 0 Rx N-terminal domain ABC_tran_CTD PF16326.5 ORF11485 - 1.4 9.2 16.1 0.76 10.1 3.7 2.4 2 0 0 2 2 2 0 ABC transporter C-terminal domain Peptidase_S46 PF10459.9 ORF11485 - 1.8 7.1 11.7 1.9 7.0 11.7 1.0 1 0 0 1 1 1 0 Peptidase S46 Nsp1_C PF05064.13 ORF11485 - 2.6 7.9 14.0 0.19 11.6 2.0 2.2 1 1 1 2 2 2 0 Nsp1-like C-terminal region UPF0242 PF06785.11 ORF11485 - 3.5 7.7 16.7 5.1 7.1 16.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Osmo_CC PF08946.10 ORF11485 - 4.5 7.6 12.3 2.7 8.3 2.9 3.1 2 2 0 2 2 2 0 Osmosensory transporter coiled coil DHR10 PF18595.1 ORF11485 - 4.8 7.3 20.5 3.1 7.9 8.4 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF641 PF04859.12 ORF11485 - 4.9 7.5 15.5 42 4.5 14.0 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) LCIB_C_CA PF18599.1 ORF11485 - 5.3 6.3 10.5 1 8.6 1.5 2.0 1 1 1 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases Spc24 PF08286.11 ORF11485 - 6.3 7.1 13.8 6.2 7.1 2.6 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF11485 - 7.3 7.0 18.8 2.9 8.2 3.4 3.0 2 1 1 3 3 3 0 Tup N-terminal Atg14 PF10186.9 ORF11485 - 9.2 5.2 10.7 19 4.2 10.8 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 SPT_ssu-like PF11779.8 ORF114730 - 0.19 11.3 6.0 0.54 9.9 2.2 2.3 2 0 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like Septin PF00735.18 ORF113484 - 0.14 11.5 2.1 0.24 10.6 2.1 1.6 1 1 0 1 1 1 0 Septin Prefoldin_2 PF01920.20 ORF113100 - 1.7e-19 69.7 16.9 2.3e-19 69.3 16.9 1.2 1 0 0 1 1 1 1 Prefoldin subunit DUF1664 PF07889.12 ORF113100 - 0.029 14.4 3.2 0.029 14.4 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 ORF113100 - 0.033 14.6 1.7 0.033 14.6 1.7 3.2 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) SpoVT_C PF15714.5 ORF113100 - 0.035 14.2 1.0 0.035 14.2 1.0 2.1 1 1 1 2 2 2 0 Stage V sporulation protein T C-terminal, transcription factor SKA2 PF16740.5 ORF113100 - 0.049 13.4 12.7 0.27 11.0 1.7 2.2 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 ING PF12998.7 ORF113100 - 0.14 12.8 10.3 0.22 12.1 0.8 2.2 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding FIVAR PF07554.13 ORF113100 - 0.35 11.6 7.5 1.9 9.3 2.1 3.1 2 1 0 2 2 2 0 FIVAR domain Syntaxin_2 PF14523.6 ORF113100 - 0.52 10.7 13.9 0.11 12.8 3.2 2.2 1 1 1 2 2 2 0 Syntaxin-like protein Spectrin PF00435.21 ORF113100 - 0.8 10.2 15.3 1.7 9.2 5.7 2.4 2 1 0 2 2 2 0 Spectrin repeat Prefoldin PF02996.17 ORF113100 - 0.82 9.6 16.3 1.7e+02 2.1 16.3 2.5 1 1 0 1 1 1 0 Prefoldin subunit DUF737 PF05300.11 ORF113100 - 0.84 10.0 18.3 1 9.7 18.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Fzo_mitofusin PF04799.13 ORF113100 - 0.98 8.9 13.3 0.41 10.2 2.7 2.1 2 0 0 2 2 2 0 fzo-like conserved region MCPsignal PF00015.21 ORF113100 - 1 9.1 9.7 0.35 10.7 2.6 2.1 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Rx_N PF18052.1 ORF113100 - 1.2 9.5 11.9 0.16 12.3 0.9 2.2 1 1 1 2 2 2 0 Rx N-terminal domain ABC_tran_CTD PF16326.5 ORF113100 - 1.4 9.2 16.1 0.76 10.1 3.7 2.4 2 0 0 2 2 2 0 ABC transporter C-terminal domain Peptidase_S46 PF10459.9 ORF113100 - 1.8 7.1 11.7 1.9 7.0 11.7 1.0 1 0 0 1 1 1 0 Peptidase S46 Nsp1_C PF05064.13 ORF113100 - 2.6 7.9 14.0 0.19 11.6 2.0 2.2 1 1 1 2 2 2 0 Nsp1-like C-terminal region UPF0242 PF06785.11 ORF113100 - 3.5 7.7 16.7 5.1 7.1 16.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Osmo_CC PF08946.10 ORF113100 - 4.5 7.6 12.3 2.7 8.3 2.9 3.1 2 2 0 2 2 2 0 Osmosensory transporter coiled coil DHR10 PF18595.1 ORF113100 - 4.8 7.3 20.5 3.1 7.9 8.4 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF641 PF04859.12 ORF113100 - 4.9 7.5 15.5 42 4.5 14.0 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) LCIB_C_CA PF18599.1 ORF113100 - 5.3 6.3 10.5 1 8.6 1.5 2.0 1 1 1 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases Spc24 PF08286.11 ORF113100 - 6.3 7.1 13.8 6.2 7.1 2.6 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF113100 - 7.3 7.0 18.8 2.9 8.2 3.4 3.0 2 1 1 3 3 3 0 Tup N-terminal Atg14 PF10186.9 ORF113100 - 9.2 5.2 10.7 19 4.2 10.8 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 MFS_1 PF07690.16 ORF110338 - 2.6e-13 49.6 18.9 3.1e-13 49.4 18.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF110338 - 0.023 13.3 15.2 0.36 9.3 0.6 2.0 1 1 1 2 2 2 0 MFS/sugar transport protein DUF4293 PF14126.6 ORF110338 - 1.1 9.5 10.1 1.5 9.0 3.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4293) Toxin_GhoT_OrtT PF10753.9 ORF110338 - 1.3 9.3 6.9 18 5.6 2.6 2.3 2 0 0 2 2 2 0 Toxin GhoT_OrtT EMP70 PF02990.16 ORF110338 - 1.6 7.3 7.5 2.1 6.9 7.5 1.2 1 0 0 1 1 1 0 Endomembrane protein 70 ABC2_membrane_5 PF13346.6 ORF110338 - 5.4 6.5 14.4 0.46 10.0 4.0 2.0 2 0 0 2 2 2 0 ABC-2 family transporter protein Peptidase_U4 PF03419.13 ORF110338 - 7.9 5.7 14.1 9.3 5.4 14.1 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Ank_2 PF12796.7 ORF109411 - 0.00028 21.4 0.1 0.00047 20.7 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF109411 - 0.05 14.2 0.0 0.57 10.9 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeat Ank_5 PF13857.6 ORF109411 - 0.12 12.7 0.2 0.36 11.2 0.0 1.9 2 0 0 2 2 2 0 Ankyrin repeats (many copies) NUC202 PF08166.12 ORF109411 - 0.32 11.1 1.9 0.83 9.8 0.6 2.0 2 0 0 2 2 2 0 NUC202 domain CENP-F_leu_zip PF10473.9 ORF108276 - 0.0078 16.2 20.8 0.46 10.5 8.4 2.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 ORF108276 - 0.0097 15.5 14.8 0.25 10.9 3.5 2.2 1 1 0 2 2 2 2 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fer4_24 PF18109.1 ORF108276 - 0.011 16.0 0.4 0.072 13.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain TPR_MLP1_2 PF07926.12 ORF108276 - 0.023 14.8 19.6 0.048 13.7 19.6 1.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein COMP PF11598.8 ORF108276 - 0.032 14.7 0.5 0.032 14.7 0.5 2.5 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein DUF2968 PF11180.8 ORF108276 - 0.085 12.5 18.3 0.13 11.9 15.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Scaffolding_pro PF11418.8 ORF108276 - 0.095 13.3 5.8 0.71 10.5 0.9 2.1 1 1 1 2 2 2 0 Phi29 scaffolding protein DUF4407 PF14362.6 ORF108276 - 0.1 11.9 11.1 0.13 11.6 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF108276 - 0.11 11.9 18.9 1.3 8.3 15.0 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF108276 - 0.11 12.8 12.9 0.13 12.5 12.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4618 PF15397.6 ORF108276 - 0.18 11.2 17.4 0.37 10.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Tup_N PF08581.10 ORF108276 - 0.29 11.5 12.7 2.7 8.4 8.4 2.8 1 1 1 2 2 2 0 Tup N-terminal Plk4_PB2 PF18409.1 ORF108276 - 0.36 11.5 4.5 0.46 11.2 4.5 1.3 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 APG6_N PF17675.1 ORF108276 - 0.46 11.0 19.0 0.16 12.5 14.2 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF108276 - 0.49 9.2 17.8 0.59 9.0 17.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF108276 - 0.58 10.3 18.8 3.1 7.9 5.1 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase HIP1_clath_bdg PF16515.5 ORF108276 - 0.62 10.7 20.2 1.7 9.3 11.4 2.3 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Helo_like_N PF17111.5 ORF108276 - 1 8.7 13.5 1.2 8.4 6.7 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins DivIC PF04977.15 ORF108276 - 1.3 8.9 21.5 1.3 8.9 0.8 3.5 2 1 2 4 4 4 0 Septum formation initiator His_binding PF02098.16 ORF108276 - 1.4 9.0 7.2 3.9 7.5 5.0 2.0 1 1 1 2 2 2 0 Tick histamine binding protein DUF2205 PF10224.9 ORF108276 - 1.4 8.9 17.8 4.2 7.4 2.0 3.2 1 1 2 3 3 3 0 Short coiled-coil protein FlaC_arch PF05377.11 ORF108276 - 2.1 8.8 13.6 8.4 6.9 4.3 3.0 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) TPD52 PF04201.15 ORF108276 - 2.2 7.9 14.3 0.33 10.5 4.9 2.2 1 1 1 2 2 2 0 Tumour protein D52 family ZapB PF06005.12 ORF108276 - 2.9 8.4 23.2 0.52 10.8 9.7 2.3 1 1 1 2 2 2 0 Cell division protein ZapB V_ATPase_I PF01496.19 ORF108276 - 3.7 5.3 11.1 4.9 5.0 10.4 1.3 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 ORF108276 - 4.8 7.3 18.4 1.2e+03 -0.3 18.6 2.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF5320 PF17253.2 ORF108276 - 4.8 8.3 12.0 1.5 9.9 3.7 2.7 1 1 1 2 2 2 0 Family of unknown function (DUF5320) DUF1525 PF07511.11 ORF108276 - 5 7.3 9.0 2.9 8.1 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) UPF0449 PF15136.6 ORF108276 - 5.4 7.5 13.5 4.8 7.7 9.6 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF108276 - 5.5 7.2 20.8 1.2 9.3 2.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor Fungal_TACC PF12709.7 ORF108276 - 5.7 7.4 15.4 7.3 7.1 2.2 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Exonuc_VII_L PF02601.15 ORF108276 - 5.8 6.4 13.0 7.1 6.1 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 ORF108276 - 6.3 7.0 16.1 1.2 9.3 6.7 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF108276 - 6.3 5.9 14.4 1.2 8.3 7.8 1.9 1 1 1 2 2 2 0 TMPIT-like protein FapA PF03961.13 ORF108276 - 6.9 5.2 13.5 12 4.4 13.5 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A FAM76 PF16046.5 ORF108276 - 7.9 5.7 15.8 6.2 6.1 13.8 1.7 1 1 1 2 2 2 0 FAM76 protein GIT_CC PF16559.5 ORF108276 - 9.1 6.2 19.3 3.8 7.4 2.1 2.7 2 1 1 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Sas6_CC PF18594.1 ORF108276 - 9.5 6.1 13.6 3.6 7.5 0.8 3.7 4 0 0 4 4 4 0 Sas6/XLF/XRCC4 coiled-coil domain Acetyltransf_15 PF17013.5 ORF10825 - 0.047 13.2 0.3 0.05 13.1 0.3 1.1 1 0 0 1 1 1 0 Putative acetyl-transferase MRP-S24 PF14955.6 ORF10825 - 0.3 11.0 3.4 0.58 10.1 2.3 1.8 1 1 1 2 2 2 0 Mitochondrial ribosome subunit S24 WD40 PF00400.32 ORF108169 - 0.023 15.5 0.1 0.78 10.7 0.0 2.3 2 0 0 2 2 2 0 WD domain, G-beta repeat Cadherin_C_2 PF16492.5 ORF107813 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF107813 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF107813 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF107813 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE Big_3_5 PF16640.5 ORF107766 - 0.051 13.8 0.0 0.061 13.5 0.0 1.1 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) DUF5526 PF17664.1 ORF104625 - 0.033 13.7 0.1 0.042 13.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5526) Ribosomal_L7Ae PF01248.26 ORF104607 - 1.9e-25 88.4 0.0 2.5e-25 88.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 ORF104607 - 0.00021 21.1 0.0 0.00027 20.8 0.0 1.2 1 0 0 1 1 1 1 PELOTA RNA binding domain RNase_P_pop3 PF08228.11 ORF104607 - 0.0029 17.7 0.1 0.0031 17.6 0.1 1.1 1 0 0 1 1 1 1 RNase P subunit Pop3 LPP PF04728.13 ORF104607 - 0.11 12.9 1.8 0.41 11.1 0.5 2.1 2 0 0 2 2 2 0 Lipoprotein leucine-zipper Cadherin_C_2 PF16492.5 ORF103333 - 0.035 14.9 1.7 0.41 11.4 1.7 2.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal Baculo_11_kDa PF06143.11 ORF103333 - 0.055 13.1 0.9 0.11 12.0 0.9 1.6 1 0 0 1 1 1 0 Baculovirus 11 kDa family ABC2_membrane_3 PF12698.7 ORF103333 - 0.06 12.5 0.1 0.06 12.5 0.1 1.7 1 1 1 2 2 2 0 ABC-2 family transporter protein NapE PF06796.11 ORF103333 - 3.5 7.2 5.6 1.4 8.5 2.6 1.9 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE adh_short_C2 PF13561.6 ORF102387 - 9.6e-25 87.5 0.4 1e-24 87.4 0.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF102387 - 4e-19 68.8 0.8 5e-19 68.5 0.8 1.1 1 0 0 1 1 1 1 short chain dehydrogenase NapB PF03892.14 ORF101221 - 0.045 13.8 0.1 0.079 13.0 0.1 1.4 1 0 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks201.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks201.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks201.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks201.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:09:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RL10P_insert PF17777.1 NODE_48847_length_385_cov_1.414286_g40966_i0forward_frame_1 - 0.06 13.4 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 Insertion domain in 60S ribosomal protein L10P NDUF_B5 PF09781.9 NODE_48846_length_385_cov_1.548571_g40965_i0forward_frame_1 - 0.3 10.7 5.2 0.46 10.0 5.2 1.3 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit Neur_chan_memb PF02932.16 NODE_48843_length_385_cov_1.794286_g40962_i0reverse_frame_1 - 0.022 14.8 0.4 0.025 14.7 0.4 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4974 PF16344.5 NODE_48843_length_385_cov_1.794286_g40962_i0reverse_frame_1 - 0.045 13.8 0.3 5 7.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4974) DUF4694 PF15765.5 NODE_48843_length_385_cov_1.794286_g40962_i0reverse_frame_1 - 0.077 13.0 0.0 0.087 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) PH_17 PF18012.1 NODE_48837_length_385_cov_2.040000_g40956_i0forward_frame_1 - 0.051 13.3 0.2 0.11 12.2 0.0 1.7 1 1 1 2 2 2 0 PH domain DUF2437 PF10370.9 NODE_48832_length_385_cov_2.248571_g40951_i0forward_frame_1 - 0.15 13.0 0.0 0.33 11.9 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF2437) COX4 PF02936.14 NODE_48819_length_385_cov_4.202857_g40938_i0forward_frame_1 - 0.3 11.1 0.4 0.47 10.5 0.4 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV NIF PF03031.18 NODE_48814_length_385_cov_22.862857_g40933_i0reverse_frame_1 - 1.4e-19 70.3 0.1 1.9e-19 70.0 0.1 1.2 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase COLFI PF01410.18 NODE_48813_length_385_cov_41.037143_g40932_i0reverse_frame_1 - 0.034 13.5 0.1 0.042 13.1 0.1 1.1 1 0 0 1 1 1 0 Fibrillar collagen C-terminal domain Popeye PF04831.13 NODE_48813_length_385_cov_41.037143_g40932_i0reverse_frame_1 - 0.12 12.5 0.1 0.12 12.5 0.1 1.7 2 0 0 2 2 2 0 Popeye protein conserved region Ras PF00071.22 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_1 - 1.1e-07 31.6 0.1 1.6e-07 31.1 0.1 1.3 1 1 0 1 1 1 1 Ras family Roc PF08477.13 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_1 - 2.8e-07 30.8 0.1 4e-07 30.3 0.1 1.5 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_1 - 8.8e-05 22.0 0.0 0.00012 21.6 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_1 - 0.039 13.3 0.0 0.048 13.0 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Lysis_col PF02402.16 NODE_48811_length_385_cov_50.591429_g40930_i0reverse_frame_1 - 0.43 10.3 2.6 0.31 10.7 0.6 1.8 2 0 0 2 2 2 0 Lysis protein Mog1 PF04603.12 NODE_48799_length_385_cov_98.305714_g40918_i0reverse_frame_1 - 0.39 11.1 3.4 0.47 10.8 3.4 1.2 1 0 0 1 1 1 0 Ran-interacting Mog1 protein Membralin PF09746.9 NODE_48799_length_385_cov_98.305714_g40918_i0reverse_frame_1 - 9 5.2 8.8 11 5.0 8.8 1.0 1 0 0 1 1 1 0 Tumour-associated protein Cytochrome_CBB3 PF13442.6 NODE_48791_length_385_cov_9360.302857_g40911_i0forward_frame_1 - 1.4e-13 50.9 0.0 2.4e-13 50.2 0.0 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 NODE_48791_length_385_cov_9360.302857_g40911_i0forward_frame_1 - 1.8e-05 25.8 0.5 0.00032 21.8 0.5 2.3 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 NODE_48791_length_385_cov_9360.302857_g40911_i0forward_frame_1 - 0.0065 16.2 0.5 0.035 13.8 0.4 2.0 1 1 1 2 2 2 1 Cytochrome c-550 domain DUF2675 PF11247.8 NODE_48791_length_385_cov_9360.302857_g40911_i0forward_frame_1 - 0.11 12.7 0.2 17 5.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2675) YABBY PF04690.13 NODE_48782_length_386_cov_1.723647_g40902_i0forward_frame_1 - 2 8.9 5.8 12 6.4 1.5 2.1 2 0 0 2 2 2 0 YABBY protein KTI12 PF08433.10 NODE_48780_length_386_cov_1.797721_g40900_i0reverse_frame_1 - 0.028 13.9 0.7 0.033 13.7 0.7 1.1 1 0 0 1 1 1 0 Chromatin associated protein KTI12 BST2 PF16716.5 NODE_48780_length_386_cov_1.797721_g40900_i0reverse_frame_1 - 0.041 14.5 1.3 0.041 14.5 1.3 1.9 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 Importin_rep_6 PF18829.1 NODE_48780_length_386_cov_1.797721_g40900_i0reverse_frame_1 - 0.054 13.6 0.4 0.054 13.6 0.4 1.5 2 0 0 2 2 2 0 Importin repeat 6 ACI44 PF15270.6 NODE_48776_length_386_cov_1.994302_g40896_i0forward_frame_1 - 0.012 15.7 0.1 0.59 10.4 0.0 2.4 2 0 0 2 2 2 0 Metallo-carboxypeptidase inhibitor DNA_methylase PF00145.17 NODE_48758_length_386_cov_4.037037_g40878_i0reverse_frame_1 - 0.024 14.0 0.0 0.028 13.8 0.0 1.1 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase DEC-1_N PF04625.13 NODE_48758_length_386_cov_4.037037_g40878_i0reverse_frame_1 - 0.025 13.6 3.8 0.029 13.4 3.8 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DUF3597 PF12200.8 NODE_48758_length_386_cov_4.037037_g40878_i0reverse_frame_1 - 0.11 13.0 0.4 0.14 12.7 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3597) DNA_pol_viral_N PF00242.17 NODE_48742_length_386_cov_80.205128_g40862_i0reverse_frame_1 - 1.1 8.6 6.2 1.3 8.4 6.2 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) N-terminal domain HXXEE PF13787.6 NODE_48736_length_386_cov_93.752137_g40856_i0reverse_frame_1 - 0.0097 16.7 3.1 0.51 11.2 3.1 2.1 1 1 0 1 1 1 1 Protein of unknown function with HXXEE motif FGFR3_TM PF18123.1 NODE_48736_length_386_cov_93.752137_g40856_i0reverse_frame_1 - 3 7.4 13.0 0.72 9.4 0.9 2.9 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain Toxin_37 PF11415.8 NODE_48733_length_386_cov_129.427350_g40853_i0forward_frame_1 - 0.25 11.2 6.3 1.9 8.4 2.7 2.5 2 0 0 2 2 2 0 Antifungal peptide termicin TRAPPC10 PF12584.8 NODE_48730_length_386_cov_146.658120_g40850_i0forward_frame_1 - 0.15 11.8 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Trafficking protein particle complex subunit 10, TRAPPC10 UPF0146 PF03686.13 NODE_48728_length_386_cov_160.729345_g40848_i0forward_frame_1 - 0.039 13.8 0.0 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0146) Anti-TRAP PF15777.5 NODE_48728_length_386_cov_160.729345_g40848_i0forward_frame_1 - 0.039 13.9 0.4 0.075 13.0 0.4 1.4 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein Lar_restr_allev PF14354.6 NODE_48728_length_386_cov_160.729345_g40848_i0forward_frame_1 - 0.055 13.9 3.7 0.13 12.6 3.7 1.6 1 0 0 1 1 1 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.10 NODE_48728_length_386_cov_160.729345_g40848_i0forward_frame_1 - 0.96 9.6 4.3 2 8.6 0.2 2.4 2 0 0 2 2 2 0 Zinc ribbon domain DUF3331 PF11811.8 NODE_48722_length_386_cov_380.715100_g40842_i0reverse_frame_1 - 0.034 14.0 0.1 0.06 13.2 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) Sulfatase PF00884.23 NODE_48711_length_387_cov_1.946023_g40832_i0reverse_frame_1 - 4.6e-12 46.0 0.0 5.3e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 Sulfatase PolC_DP2 PF03833.13 NODE_48703_length_387_cov_2.519886_g40824_i0reverse_frame_1 - 0.22 9.3 2.1 0.23 9.3 2.1 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Staph_opine_DH PF10100.9 NODE_48697_length_387_cov_2.821023_g40818_i0forward_frame_1 - 0.28 9.8 2.8 0.63 8.6 0.4 1.9 2 0 0 2 2 2 0 Staphylopine dehydrogenase Myb_CC_LHEQLE PF14379.6 NODE_48683_length_387_cov_12.886364_g40804_i0reverse_frame_1 - 0.026 14.2 0.6 5.9 6.7 0.0 3.2 4 0 0 4 4 4 0 MYB-CC type transfactor, LHEQLE motif Folate_carrier PF01770.18 NODE_48683_length_387_cov_12.886364_g40804_i0reverse_frame_1 - 0.37 9.5 1.9 0.39 9.4 1.9 1.1 1 0 0 1 1 1 0 Reduced folate carrier DUF3159 PF11361.8 NODE_48683_length_387_cov_12.886364_g40804_i0forward_frame_1 - 0.083 12.6 1.4 0.11 12.2 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3159) SUR7 PF06687.12 NODE_48683_length_387_cov_12.886364_g40804_i0forward_frame_1 - 6.5 6.3 19.4 2.1 8.0 17.0 1.3 1 1 0 1 1 1 0 SUR7/PalI family DUF3385 PF11865.8 NODE_48680_length_387_cov_23.943182_g40801_i0forward_frame_1 - 0.079 12.9 0.0 0.096 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) MWFE PF15879.5 NODE_48671_length_387_cov_67.343750_g40792_i0forward_frame_1 - 0.13 12.5 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit Peptidase_S49_N PF08496.10 NODE_48671_length_387_cov_67.343750_g40792_i0forward_frame_1 - 2.4 8.2 9.9 33 4.5 9.9 2.0 1 1 0 1 1 1 0 Peptidase family S49 N-terminal Presenilin PF01080.17 NODE_48671_length_387_cov_67.343750_g40792_i0forward_frame_1 - 4 6.1 4.4 4.5 5.9 4.4 1.2 1 0 0 1 1 1 0 Presenilin TPR_22 PF18833.1 NODE_48662_length_387_cov_79.684659_g40785_i0forward_frame_1 - 0.036 14.2 1.2 0.071 13.3 0.6 1.7 1 1 0 1 1 1 0 Tetratricopeptide repeat DUF2095 PF09868.9 NODE_48659_length_387_cov_80.551136_g40782_i0reverse_frame_1 - 0.025 14.6 0.0 0.031 14.2 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2095) DUF4431 PF14485.6 NODE_48656_length_387_cov_91.511364_g40779_i0reverse_frame_1 - 0.22 11.3 0.0 0.39 10.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4431) CBM_48 PF02922.18 NODE_48650_length_387_cov_159.181818_g40773_i0reverse_frame_1 - 2.9e-05 24.3 0.0 5.2e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMPK1_CBM PF16561.5 NODE_48650_length_387_cov_159.181818_g40773_i0reverse_frame_1 - 0.0012 19.0 0.1 0.0025 18.0 0.1 1.5 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase Ribosomal_S22 PF08136.11 NODE_48645_length_387_cov_321.119318_g40768_i0forward_frame_1 - 0.0094 16.3 0.1 0.017 15.5 0.1 1.4 1 0 0 1 1 1 1 30S ribosomal protein subunit S22 family PHD_2 PF13831.6 NODE_48644_length_387_cov_371.545455_g40767_i0reverse_frame_1 - 0.39 10.3 4.8 1.4 8.5 0.2 2.3 2 0 0 2 2 2 0 PHD-finger Me-amine-dh_L PF02975.14 NODE_48635_length_387_cov_12968.599432_g40758_i0reverse_frame_1 - 0.3 11.6 4.5 0.92 10.0 0.3 2.3 1 1 1 2 2 2 0 Methylamine dehydrogenase, L chain Peptidase_C2 PF00648.21 NODE_48632_length_388_cov_1.696884_g40755_i0reverse_frame_2 - 1.3e-10 40.8 0.1 2.5e-10 39.9 0.1 1.4 1 1 0 1 1 1 1 Calpain family cysteine protease DHR-2 PF06920.13 NODE_48632_length_388_cov_1.696884_g40755_i0reverse_frame_2 - 0.041 12.5 0.2 0.042 12.5 0.2 1.0 1 0 0 1 1 1 0 Dock homology region 2 TPR_18 PF13512.6 NODE_48632_length_388_cov_1.696884_g40755_i0reverse_frame_2 - 0.13 12.4 0.1 0.18 11.9 0.1 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat Ribosomal_S7 PF00177.21 NODE_48630_length_388_cov_1.841360_g40753_i0forward_frame_2 - 6.8e-05 22.6 0.3 9.5e-05 22.1 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ndc1_Nup PF09531.10 NODE_48628_length_388_cov_1.977337_g40751_i0reverse_frame_3 - 0.22 10.1 3.4 0.27 9.9 3.4 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup CDC13_N PF16853.5 NODE_48623_length_388_cov_2.351275_g40746_i0reverse_frame_3 - 0.034 13.7 5.4 0.046 13.3 5.4 1.1 1 0 0 1 1 1 0 Cell division control protein 13 N-terminus Baculo_11_kDa PF06143.11 NODE_48621_length_388_cov_2.504249_g40744_i0reverse_frame_3 - 0.015 14.9 0.2 0.021 14.4 0.2 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family V_ATPase_I PF01496.19 NODE_48621_length_388_cov_2.504249_g40744_i0forward_frame_2 - 3e-46 157.8 4.2 3.3e-46 157.7 4.2 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Colicin_K PF17500.2 NODE_48617_length_388_cov_2.779037_g40740_i0forward_frame_3 - 0.053 14.1 1.4 0.053 14.1 1.4 1.7 1 1 0 1 1 1 0 Colicin-K DUF535 PF04393.13 NODE_48610_length_388_cov_3.606232_g40733_i0reverse_frame_2 - 4.1e-18 65.6 1.0 4.9e-18 65.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF535) DUF3481 PF11980.8 NODE_48601_length_388_cov_10.589235_g40724_i0forward_frame_3 - 0.72 9.6 3.3 1.4 8.6 3.3 1.5 1 1 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein EB PF01683.18 NODE_48599_length_388_cov_19.164306_g40722_i0reverse_frame_3 - 0.58 10.5 8.8 44 4.5 8.8 2.5 1 1 0 1 1 1 0 EB module Frag1 PF10277.9 NODE_48595_length_388_cov_49.022663_g40718_i0forward_frame_2 - 0.076 12.5 2.3 0.089 12.3 2.3 1.2 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family DUF3891 PF13030.6 NODE_48595_length_388_cov_49.022663_g40718_i0forward_frame_2 - 0.079 12.7 0.0 0.083 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3891) Ph1570 PF09638.10 NODE_48588_length_388_cov_65.770538_g40711_i0reverse_frame_3 - 0.044 13.6 0.0 0.065 13.1 0.0 1.3 1 0 0 1 1 1 0 Ph1570 protein PfUIS3 PF11567.8 NODE_48588_length_388_cov_65.770538_g40711_i0forward_frame_3 - 0.057 13.8 0.1 0.083 13.3 0.1 1.3 1 0 0 1 1 1 0 Plasmodium falciparum UIS3 membrane protein SWIB PF02201.18 NODE_48587_length_388_cov_66.274788_g40710_i0forward_frame_2 - 7.2e-26 89.9 0.1 9.7e-26 89.5 0.1 1.2 1 0 0 1 1 1 1 SWIB/MDM2 domain Hum_adeno_E3A PF05393.11 NODE_48584_length_388_cov_73.087819_g40707_i0reverse_frame_2 - 9.4 6.3 9.0 0.61 10.1 0.6 2.1 2 0 0 2 2 2 0 Human adenovirus early E3A glycoprotein LOH1CR12 PF10158.9 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.0065 16.5 3.7 0.0091 16.0 3.7 1.2 1 0 0 1 1 1 1 Tumour suppressor protein SLX9 PF15341.6 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.0071 16.7 8.0 0.0088 16.4 8.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein SLX9 BST2 PF16716.5 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.0092 16.5 3.4 0.0092 16.5 3.4 2.1 1 1 1 2 2 2 1 Bone marrow stromal antigen 2 FlxA PF14282.6 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.011 15.7 9.6 0.11 12.5 7.1 2.1 1 1 1 2 2 2 0 FlxA-like protein MscS_porin PF12795.7 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.012 15.1 16.2 0.014 14.9 15.5 1.4 1 1 0 1 1 1 0 Mechanosensitive ion channel porin domain CENP-K PF11802.8 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.02 14.5 3.8 0.024 14.2 3.8 1.1 1 0 0 1 1 1 0 Centromere-associated protein K EAP30 PF04157.16 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.021 14.1 8.2 0.057 12.7 8.2 1.6 1 1 0 1 1 1 0 EAP30/Vps36 family Golgin_A5 PF09787.9 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.044 13.3 9.6 0.053 13.0 9.6 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 Swi5 PF07061.11 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.055 13.6 2.2 0.055 13.6 2.2 1.9 2 0 0 2 2 2 0 Swi5 DMPK_coil PF08826.10 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.069 13.3 12.0 2.9 8.1 0.8 3.1 1 1 2 3 3 3 0 DMPK coiled coil domain like Peptidase_M16 PF00675.20 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.095 12.7 2.9 0.11 12.5 2.9 1.2 1 0 0 1 1 1 0 Insulinase (Peptidase family M16) SRP1_TIP1 PF00660.17 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.095 12.8 0.6 0.29 11.2 0.2 1.8 1 1 1 2 2 2 0 Seripauperin and TIP1 family Spc7 PF08317.11 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.12 11.2 8.1 0.15 11.0 8.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4472 PF14739.6 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.14 12.9 10.8 1.2 9.9 5.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) Nup54 PF13874.6 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.14 12.2 14.4 0.048 13.8 10.3 1.9 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 DUF1465 PF07323.12 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.15 11.9 12.1 0.52 10.1 5.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1465) PLAC9 PF15205.6 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.19 12.2 1.1 20 5.7 0.3 2.3 1 1 1 2 2 2 0 Placenta-specific protein 9 EzrA PF06160.12 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.19 9.8 6.7 0.24 9.5 6.7 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA DUF1664 PF07889.12 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.23 11.5 3.2 0.3 11.1 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DivIVA PF05103.13 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.29 11.2 6.2 0.27 11.3 4.6 1.7 1 1 0 1 1 1 0 DivIVA protein HAUS-augmin3 PF14932.6 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.3 10.6 10.1 0.36 10.4 10.1 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 YabA PF06156.13 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.3 11.8 5.6 0.88 10.2 2.4 2.0 1 1 1 2 2 2 0 Initiation control protein YabA ZapB PF06005.12 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.32 11.4 13.7 0.58 10.6 3.7 2.2 1 1 1 2 2 2 0 Cell division protein ZapB MPS2 PF17060.5 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.42 9.8 2.9 0.52 9.5 2.9 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 Atg14 PF10186.9 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.47 9.5 6.8 0.48 9.4 6.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 SlyX PF04102.12 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.54 10.9 13.0 0.089 13.4 3.2 2.2 1 1 1 2 2 2 0 SlyX Tho2 PF11262.8 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.6 9.3 4.3 0.71 9.0 4.3 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Cnn_1N PF07989.11 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.8 9.9 7.2 2.2 8.5 2.1 2.2 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 PI3K_P85_iSH2 PF16454.5 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.81 9.3 7.9 0.81 9.3 5.4 1.8 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF1043 PF06295.12 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 0.93 9.5 7.3 4.7 7.2 7.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) DUF3138 PF11336.8 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 1 7.9 2.3 1 7.9 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) TMPIT PF07851.13 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 1.1 8.5 3.3 1.2 8.3 3.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein Fmp27_WPPW PF10359.9 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 1.1 8.0 6.2 1.3 7.8 6.2 1.2 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain NBD_C PF17042.5 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 1.2 9.6 9.4 1.5 9.3 9.4 1.1 1 0 0 1 1 1 0 Nucleotide-binding C-terminal domain V_ATPase_I PF01496.19 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 1.4 6.7 4.4 1.5 6.7 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FUSC PF04632.12 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 1.4 7.3 17.4 1.7 7.1 17.4 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Exonuc_VII_L PF02601.15 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 1.8 8.0 9.0 2 7.9 9.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4404 PF14357.6 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 1.9 9.2 10.0 0.18 12.4 4.0 2.1 2 1 1 3 3 2 0 Domain of unknown function (DUF4404) Spc24 PF08286.11 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 2.5 8.4 8.8 1.1 9.5 3.2 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 MRFAP1 PF15155.6 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 2.6 8.6 11.8 0.46 11.0 5.0 2.0 1 1 1 2 2 2 0 MORF4 family-associated protein1 DUF2205 PF10224.9 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 4.6 7.3 11.1 5 7.2 4.2 2.9 1 1 2 3 3 3 0 Short coiled-coil protein VIT1 PF01988.19 NODE_48581_length_388_cov_77.354108_g40704_i0reverse_frame_2 - 6.5 6.6 6.2 7.4 6.4 6.2 1.2 1 0 0 1 1 1 0 VIT family DUF5588 PF17826.1 NODE_48580_length_388_cov_77.637394_g40703_i0forward_frame_2 - 0.18 10.6 0.2 0.23 10.3 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5588) DUF3487 PF11990.8 NODE_48578_length_388_cov_86.781870_g40701_i0reverse_frame_2 - 3.8 7.4 11.1 0.54 10.2 4.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3487) Pannexin_like PF12534.8 NODE_48577_length_388_cov_87.277620_g40700_i0reverse_frame_2 - 0.059 12.5 0.0 0.082 12.0 0.0 1.2 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 T6SS_VasJ PF16989.5 NODE_48575_length_388_cov_88.152975_g40698_i0reverse_frame_3 - 0.012 15.0 1.0 0.016 14.7 1.0 1.2 1 0 0 1 1 1 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 14-3-3 PF00244.20 NODE_48568_length_388_cov_102.841360_g40691_i0reverse_frame_2 - 4.2e-06 26.4 0.0 5.7e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 14-3-3 protein DUF3234 PF11572.8 NODE_48566_length_388_cov_113.699717_g40689_i0reverse_frame_3 - 0.098 12.8 0.0 6.9 6.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3234) DUF3431 PF11913.8 NODE_48566_length_388_cov_113.699717_g40689_i0forward_frame_3 - 1.1e-09 38.4 0.0 1.3e-09 38.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3431) SseB_C PF14581.6 NODE_48566_length_388_cov_113.699717_g40689_i0forward_frame_3 - 0.11 12.6 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 SseB protein C-terminal domain DUF2457 PF10446.9 NODE_48565_length_388_cov_115.762040_g40688_i0reverse_frame_3 - 0.0017 17.6 0.4 0.0024 17.1 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2457) DDRGK PF09756.9 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 3.1e-38 131.2 0.1 3.7e-38 131.0 0.1 1.1 1 0 0 1 1 1 1 DDRGK domain FeoC PF09012.10 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 1.6e-05 24.9 0.4 0.00051 20.1 0.1 2.1 2 0 0 2 2 2 1 FeoC like transcriptional regulator HTH_DeoR PF08220.12 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.03 14.1 0.0 0.22 11.3 0.1 2.0 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain DUF469 PF04320.14 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.04 14.8 0.2 3.5 8.5 0.2 2.1 1 1 0 1 1 1 0 Protein with unknown function (DUF469) Lipoprotein_1 PF00820.19 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.077 12.0 0.0 0.089 11.8 0.0 1.1 1 0 0 1 1 1 0 Borrelia lipoprotein HTH_11 PF08279.12 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.081 12.9 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 HTH domain DUF4128 PF13554.6 NODE_48560_length_388_cov_193.793201_g40683_i0forward_frame_3 - 0.083 12.9 0.0 0.3 11.2 0.0 1.8 2 0 0 2 2 2 0 Bacteriophage related domain of unknown function Ribosomal_L13e PF01294.18 NODE_48557_length_388_cov_311.320113_g40680_i0reverse_frame_3 - 3.3e-34 118.3 3.6 4e-34 118.0 3.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L13e DUF3512 PF12024.8 NODE_48540_length_389_cov_1.929379_g40664_i0reverse_frame_2 - 0.0055 16.2 0.2 0.0065 16.0 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3512) LMBR1 PF04791.16 NODE_48540_length_389_cov_1.929379_g40664_i0reverse_frame_2 - 0.47 9.3 1.3 0.49 9.2 1.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ycf70 PF17382.2 NODE_48540_length_389_cov_1.929379_g40664_i0forward_frame_3 - 0.17 12.3 0.4 0.24 11.8 0.4 1.4 1 0 0 1 1 1 0 Uncharacterized Ycf70-like TPR_19 PF14559.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 3.2e-09 37.2 1.2 0.00043 20.7 0.3 2.5 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 5.7e-07 29.5 2.5 0.0012 19.0 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 7.6e-06 25.7 3.4 0.094 12.9 0.2 3.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 9.2e-06 25.9 2.5 0.0086 16.3 0.2 2.8 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 1e-05 25.1 3.9 0.0069 16.2 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 1.3e-05 24.9 0.3 0.42 10.6 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 1.7e-05 25.4 0.1 0.00023 21.8 0.0 2.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 2.3e-05 24.2 2.5 0.063 13.5 0.4 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 0.00098 19.0 0.5 0.48 10.6 0.1 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 0.0021 18.7 0.4 0.25 12.3 0.1 2.7 2 1 1 3 3 3 1 Tetratricopeptide repeat ERAP1_C PF11838.8 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 0.039 13.5 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 ERAP1-like C-terminal domain TPR_11 PF13414.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 0.097 12.4 8.8 7.1 6.4 0.1 3.9 2 1 2 4 4 4 0 TPR repeat TPR_6 PF13174.6 NODE_48537_length_389_cov_2.031073_g40661_i0forward_frame_3 - 2.5 8.9 5.8 4.6 8.1 0.2 3.0 4 0 0 4 4 3 0 Tetratricopeptide repeat DUF370 PF04025.12 NODE_48536_length_389_cov_2.050847_g40660_i0forward_frame_3 - 0.039 14.1 0.0 0.056 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF370) KdpA PF03814.15 NODE_48529_length_389_cov_3.005650_g40653_i0reverse_frame_2 - 2.3e-46 158.1 6.5 2.5e-46 158.0 6.5 1.0 1 0 0 1 1 1 1 Potassium-transporting ATPase A subunit NMN_transporter PF04973.12 NODE_48529_length_389_cov_3.005650_g40653_i0reverse_frame_2 - 0.016 15.1 2.8 0.025 14.5 2.8 1.3 1 0 0 1 1 1 0 Nicotinamide mononucleotide transporter ABC2_membrane_3 PF12698.7 NODE_48529_length_389_cov_3.005650_g40653_i0reverse_frame_2 - 0.034 13.3 4.4 0.067 12.3 4.4 1.5 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF4131 PF13567.6 NODE_48529_length_389_cov_3.005650_g40653_i0reverse_frame_2 - 0.28 10.8 1.2 0.33 10.6 0.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) APOBEC_N PF08210.11 NODE_48529_length_389_cov_3.005650_g40653_i0forward_frame_2 - 0.13 12.1 4.9 0.15 12.0 4.9 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain TMCCDC2 PF15844.5 NODE_48523_length_389_cov_4.011299_g40647_i0reverse_frame_2 - 0.12 12.3 1.2 0.17 11.8 1.2 1.3 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 COQ9 PF08511.11 NODE_48523_length_389_cov_4.011299_g40647_i0forward_frame_2 - 0.13 12.0 1.0 0.77 9.6 1.0 2.0 1 1 0 1 1 1 0 COQ9 Zn_clus PF00172.18 NODE_48522_length_389_cov_4.155367_g40646_i0reverse_frame_2 - 0.15 12.2 0.6 0.15 12.2 0.6 2.0 2 0 0 2 2 2 0 Fungal Zn(2)-Cys(6) binuclear cluster domain Pkinase PF00069.25 NODE_48522_length_389_cov_4.155367_g40646_i0forward_frame_2 - 1.6e-09 37.5 0.0 2.5e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_48522_length_389_cov_4.155367_g40646_i0forward_frame_2 - 1.1e-07 31.4 0.0 1.4e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase NUT PF12881.7 NODE_48518_length_389_cov_41.494350_g40642_i0forward_frame_3 - 4.1 5.7 8.6 5 5.4 8.6 1.0 1 0 0 1 1 1 0 NUT protein Presenilin PF01080.17 NODE_48518_length_389_cov_41.494350_g40642_i0forward_frame_3 - 4.5 5.9 10.5 5.1 5.8 10.5 1.1 1 0 0 1 1 1 0 Presenilin MPS-4 PF17523.2 NODE_48511_length_389_cov_75.429379_g40635_i0reverse_frame_3 - 0.052 13.7 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 zf-rbx1 PF12678.7 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 1.8e-07 31.3 5.1 3.3e-07 30.5 5.1 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 7.3e-07 29.4 5.0 1.3e-06 28.6 5.0 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 3.3e-06 26.8 3.4 6.1e-06 26.0 3.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.00018 21.5 1.0 0.0003 20.8 1.0 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.00086 19.1 4.4 0.0018 18.1 4.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.011 15.6 1.8 0.022 14.6 1.8 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Ribosomal_L33 PF00471.20 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.016 15.7 1.8 0.059 13.8 0.2 2.3 2 0 0 2 2 2 0 Ribosomal protein L33 RINGv PF12906.7 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.027 14.6 3.3 0.051 13.7 3.3 1.4 1 0 0 1 1 1 0 RING-variant domain zf-RING_UBOX PF13445.6 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.57 10.3 3.9 1.2 9.2 1.3 2.3 1 1 1 2 2 2 0 RING-type zinc-finger zf-RING_4 PF14570.6 NODE_48510_length_389_cov_76.144068_g40634_i0forward_frame_3 - 0.64 9.9 5.2 0.61 9.9 3.7 1.7 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RING_2 PF13639.6 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 1.6e-11 44.4 5.9 1.6e-11 44.4 5.9 1.8 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 8.6e-09 35.6 6.7 8.6e-09 35.6 6.7 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 3.1e-07 30.1 6.2 6.7e-07 29.1 6.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 3.2e-07 30.2 4.0 7e-07 29.1 4.0 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 7.6e-07 29.1 2.0 8.4e-07 28.9 1.1 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 3e-06 27.0 3.4 3e-06 27.0 3.4 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 3.4e-06 26.7 3.2 3.4e-06 26.7 3.2 1.9 2 0 0 2 2 2 1 RING-like zinc finger Prok-RING_4 PF14447.6 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 5.5e-06 26.1 4.0 1.2e-05 25.1 4.0 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 1.2e-05 25.1 5.0 2.7e-05 23.9 5.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 2.4e-05 24.3 4.6 0.0012 18.8 4.6 2.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 4.1e-05 23.1 3.4 8.1e-05 22.2 3.4 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING-like PF08746.11 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.00026 21.2 3.7 0.00026 21.2 3.7 1.8 2 0 0 2 2 2 1 RING-like domain zf-C3HC4_4 PF15227.6 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.00041 20.5 3.3 0.0012 18.9 3.3 1.9 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_10 PF16685.5 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.0016 18.6 2.5 0.0032 17.6 2.5 1.5 1 0 0 1 1 1 1 zinc RING finger of MSL2 FANCL_C PF11793.8 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.0081 16.3 4.3 0.061 13.5 4.3 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain zf-RING_4 PF14570.6 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.043 13.6 5.5 0.33 10.8 4.4 2.4 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3H2C3 PF17122.5 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.052 13.6 3.9 0.052 13.6 3.9 2.0 2 1 0 2 2 1 0 Zinc-finger Zf_RING PF16744.5 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.057 13.5 5.9 1 9.5 5.9 2.3 1 1 0 1 1 1 0 KIAA1045 RING finger Lip_A_acyltrans PF03279.13 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.079 12.1 0.2 0.24 10.5 0.0 1.7 2 0 0 2 2 2 0 Bacterial lipid A biosynthesis acyltransferase CxC4 PF18717.1 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.14 12.0 4.6 0.036 13.9 1.5 1.6 1 1 1 2 2 2 0 CxC4 like cysteine cluster associated with KDZ transposases DUF1272 PF06906.11 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 0.28 11.3 5.5 1.7 8.8 1.6 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1272) RecR PF02132.15 NODE_48504_length_389_cov_91.367232_g40628_i0forward_frame_2 - 2.4 7.8 7.9 3.9 7.1 0.3 3.2 3 0 0 3 3 3 0 RecR protein Phage_holin_3_6 PF07332.11 NODE_48501_length_389_cov_100.870056_g40625_i0forward_frame_2 - 0.35 10.9 5.5 0.5 10.4 5.5 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III PsbH PF00737.20 NODE_48501_length_389_cov_100.870056_g40625_i0forward_frame_2 - 0.5 10.1 5.7 5.8 6.7 0.7 2.2 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein Sugar_tr PF00083.24 NODE_48500_length_389_cov_101.036723_g40624_i0reverse_frame_3 - 7.4e-08 31.7 5.9 9.8e-08 31.3 5.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_48500_length_389_cov_101.036723_g40624_i0reverse_frame_3 - 3.2e-06 26.3 3.9 4e-06 26.0 3.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MMADHC PF10229.9 NODE_48497_length_389_cov_111.446328_g40621_i0reverse_frame_2 - 0.096 12.4 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein Rab5ip PF07019.12 NODE_48494_length_389_cov_135.644068_g40618_i0reverse_frame_2 - 7.1 7.3 9.0 4.5 7.9 0.2 2.4 2 1 0 2 2 2 0 Rab5-interacting protein (Rab5ip) DUF1659 PF07872.11 NODE_48494_length_389_cov_135.644068_g40618_i0forward_frame_2 - 0.38 10.4 2.9 4.6 7.0 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1659) zf-RING_2 PF13639.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 1.1e-10 41.7 7.3 1.1e-10 41.7 7.3 2.0 2 1 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 4.5e-10 39.3 6.3 4.5e-10 39.3 6.3 2.1 2 1 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 5.8e-10 39.0 7.4 4.8e-09 36.1 7.4 2.4 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 2.7e-08 33.5 7.0 2.7e-08 33.5 7.0 2.2 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 5.2e-08 32.6 7.8 5.2e-08 32.6 7.8 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 1.8e-05 24.8 12.6 9.3e-05 22.5 9.7 3.1 2 1 1 3 3 3 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 3e-05 23.7 9.8 3e-05 23.7 9.8 2.2 2 1 0 2 2 2 1 RING/Ubox like zinc-binding domain zf-RING_11 PF17123.5 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 5.1e-05 22.9 0.4 5.1e-05 22.9 0.4 2.1 1 1 1 2 2 2 1 RING-like zinc finger Prok-RING_4 PF14447.6 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 0.0038 17.1 11.7 0.0038 17.1 11.7 2.8 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 0.0062 16.8 4.7 0.0062 16.8 4.7 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain Rtf2 PF04641.12 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 0.022 14.1 12.6 0.041 13.2 12.6 1.4 1 1 0 1 1 1 0 Rtf2 RING-finger Trm112p PF03966.16 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 0.17 12.5 2.7 0.18 12.4 0.7 2.1 2 1 0 2 2 2 0 Trm112p-like protein Zn-C2H2_12 PF18112.1 NODE_48492_length_389_cov_141.901130_g40616_i0forward_frame_2 - 0.65 10.5 6.0 4.1 8.0 1.3 2.8 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain DUF1819 PF08849.11 NODE_48489_length_389_cov_176.505650_g40613_i0forward_frame_2 - 0.034 13.9 0.9 0.07 12.9 0.3 1.7 1 1 0 1 1 1 0 Putative inner membrane protein (DUF1819) Endonuc-HincII PF09226.11 NODE_48487_length_389_cov_205.861582_g40611_i0forward_frame_2 - 0.01 15.1 0.2 0.013 14.9 0.2 1.2 1 0 0 1 1 1 0 Restriction endonuclease HincII phage_tail_N PF08400.10 NODE_48487_length_389_cov_205.861582_g40611_i0forward_frame_2 - 0.014 15.4 0.0 0.017 15.1 0.0 1.1 1 0 0 1 1 1 0 Prophage tail fibre N-terminal MiaE_2 PF13794.6 NODE_48487_length_389_cov_205.861582_g40611_i0forward_frame_2 - 0.035 13.8 0.0 0.045 13.5 0.0 1.2 1 0 0 1 1 1 0 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like DUF3810 PF12725.7 NODE_48473_length_390_cov_1.836620_g40597_i0reverse_frame_3 - 0.032 13.6 1.2 0.038 13.3 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) SPT_ssu-like PF11779.8 NODE_48473_length_390_cov_1.836620_g40597_i0reverse_frame_3 - 0.51 10.0 4.9 0.68 9.6 0.3 2.3 2 0 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like Kinesin PF00225.23 NODE_48473_length_390_cov_1.836620_g40597_i0forward_frame_3 - 3.8e-34 118.1 0.1 4.8e-34 117.8 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain Kinesin_assoc PF16183.5 NODE_48473_length_390_cov_1.836620_g40597_i0forward_frame_3 - 0.00032 20.9 1.5 0.00066 19.9 0.6 1.8 2 0 0 2 2 2 1 Kinesin-associated AstA PF04958.12 NODE_48472_length_390_cov_1.909859_g40596_i0forward_frame_2 - 8.6e-39 133.0 0.0 9.6e-39 132.9 0.0 1.0 1 0 0 1 1 1 1 Arginine N-succinyltransferase beta subunit DUF3587 PF12132.8 NODE_48471_length_390_cov_1.980282_g40595_i0reverse_frame_3 - 2.1 7.8 10.1 3.6 7.0 10.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3587) DUF2997 PF11211.8 NODE_48471_length_390_cov_1.980282_g40595_i0forward_frame_2 - 0.14 11.9 0.1 0.52 10.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2997) Pyr_redox_2 PF07992.14 NODE_48467_length_390_cov_2.346479_g40591_i0reverse_frame_3 - 2.3e-16 59.9 0.0 2.7e-16 59.7 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DUF5345 PF17280.2 NODE_48465_length_390_cov_2.419718_g40589_i0forward_frame_2 - 0.0094 15.9 0.0 0.016 15.1 0.0 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5345) CRCB PF02537.15 NODE_48462_length_390_cov_2.664789_g40586_i0forward_frame_2 - 0.05 13.9 0.3 0.06 13.7 0.3 1.3 1 0 0 1 1 1 0 CrcB-like protein, Camphor Resistance (CrcB) Fels1 PF05666.11 NODE_48461_length_390_cov_2.681690_g40585_i0reverse_frame_3 - 0.037 13.7 0.1 0.097 12.3 0.0 1.7 2 0 0 2 2 2 0 Fels-1 Prophage Protein-like ASFV_J13L PF05568.11 NODE_48460_length_390_cov_2.740845_g40584_i0forward_frame_2 - 0.057 13.2 2.0 0.08 12.7 2.0 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Abhydrolase_9_N PF15420.6 NODE_48459_length_390_cov_2.842254_g40583_i0forward_frame_3 - 0.025 14.6 0.9 0.027 14.5 0.9 1.1 1 0 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus DUF1265 PF06887.14 NODE_48457_length_390_cov_2.954930_g40581_i0reverse_frame_3 - 0.06 13.3 0.0 4.3 7.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1265) Peptidase_S11 PF00768.20 NODE_48457_length_390_cov_2.954930_g40581_i0forward_frame_2 - 1.1e-36 126.5 0.1 1.3e-36 126.3 0.1 1.0 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase p450 PF00067.22 NODE_48456_length_390_cov_2.977465_g40580_i0forward_frame_2 - 4.1e-27 95.1 0.2 4.5e-27 94.9 0.2 1.0 1 0 0 1 1 1 1 Cytochrome P450 LMF1 PF06762.14 NODE_48445_length_390_cov_36.298592_g40569_i0forward_frame_3 - 1.1 8.3 5.5 1.2 8.1 5.5 1.2 1 0 0 1 1 1 0 Lipase maturation factor Myb_DNA-bind_6 PF13921.6 NODE_48431_length_390_cov_84.718310_g40555_i0reverse_frame_2 - 0.00053 20.2 0.4 0.00083 19.6 0.4 1.5 1 1 0 1 1 1 1 Myb-like DNA-binding domain MADF_DNA_bdg PF10545.9 NODE_48431_length_390_cov_84.718310_g40555_i0reverse_frame_2 - 0.0098 16.2 0.5 0.012 15.9 0.5 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase transcription factor Myb/SANT-like Myb_DNA-binding PF00249.31 NODE_48431_length_390_cov_84.718310_g40555_i0reverse_frame_2 - 0.11 12.8 1.4 0.22 11.8 1.4 1.6 1 1 0 1 1 1 0 Myb-like DNA-binding domain zf-RING_2 PF13639.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1e-10 41.7 2.3 1.6e-10 41.2 2.3 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 2.9e-08 33.4 1.9 5.2e-08 32.6 1.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 2.6e-07 30.4 1.2 4.1e-07 29.8 1.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 3.5e-07 30.4 4.5 1.2e-06 28.7 4.5 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 8e-07 28.8 2.2 1.7e-06 27.7 2.2 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1e-06 28.3 5.3 2e-06 27.5 5.3 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1.2e-06 28.4 3.1 2.1e-06 27.7 3.1 1.4 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1.5e-06 27.9 1.2 4.8e-06 26.3 1.1 1.8 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 1.2e-05 25.2 2.5 4e-05 23.5 2.1 1.9 1 1 1 2 2 2 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.0013 18.3 3.2 0.0024 17.5 3.2 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.0015 18.5 1.1 0.0038 17.2 0.9 1.7 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger Adeno_terminal PF02459.15 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.016 13.6 0.0 0.017 13.6 0.0 1.2 1 0 0 1 1 1 0 Adenoviral DNA terminal protein zf-Nse PF11789.8 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.041 13.7 0.9 0.13 12.1 0.9 1.8 1 1 1 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.057 13.6 2.1 0.22 11.7 2.1 2.0 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING RINGv PF12906.7 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.16 12.1 3.9 0.45 10.7 3.0 2.0 1 1 1 2 2 2 0 RING-variant domain PHD_4 PF16866.5 NODE_48425_length_390_cov_101.605634_g40549_i0forward_frame_3 - 0.2 11.8 3.9 1.9 8.7 3.9 2.2 1 1 0 1 1 1 0 PHD-finger PAP_fibrillin PF04755.12 NODE_48424_length_390_cov_104.563380_g40548_i0reverse_frame_2 - 1.8e-05 24.8 0.0 4.4e-05 23.5 0.0 1.5 1 1 0 1 1 1 1 PAP_fibrillin Ndc1_Nup PF09531.10 NODE_48418_length_390_cov_135.307042_g40542_i0reverse_frame_3 - 8.8 4.9 8.9 9.3 4.8 8.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PhetRS_B1 PF18262.1 NODE_48418_length_390_cov_135.307042_g40542_i0forward_frame_2 - 0.052 13.8 0.1 9.4 6.5 0.0 2.3 2 0 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain BCCT PF02028.17 NODE_48417_length_390_cov_144.112676_g40541_i0reverse_frame_3 - 2.6e-20 72.3 0.3 2.9e-20 72.2 0.3 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DUF1505 PF07403.11 NODE_48416_length_390_cov_145.394366_g40540_i0reverse_frame_3 - 0.12 12.6 0.4 0.19 12.0 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) DnaJ PF00226.31 NODE_48416_length_390_cov_145.394366_g40540_i0reverse_frame_2 - 3.5e-05 23.8 0.8 5.2e-05 23.3 0.1 1.6 2 0 0 2 2 2 1 DnaJ domain Anti-TRAP PF15777.5 NODE_48412_length_390_cov_197.825352_g40536_i0forward_frame_3 - 0.12 12.3 0.3 3.9 7.5 0.1 2.8 3 0 0 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF3774 PF12609.8 NODE_48409_length_390_cov_339.138028_g40533_i0reverse_frame_3 - 0.8 10.8 4.6 1.9 9.6 4.6 1.6 1 1 0 1 1 1 0 Wound-induced protein Enterotoxin_a PF01375.17 NODE_48409_length_390_cov_339.138028_g40533_i0reverse_frame_3 - 0.84 9.2 3.2 1.1 8.8 3.2 1.1 1 0 0 1 1 1 0 Heat-labile enterotoxin alpha chain TMIE PF16038.5 NODE_48408_length_390_cov_490.016901_g40532_i0reverse_frame_3 - 0.05 13.4 0.5 0.05 13.4 0.5 2.1 2 0 0 2 2 2 0 TMIE protein NUDIX PF00293.28 ORF99505 - 3.3e-21 75.7 0.8 4e-21 75.4 0.8 1.0 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 ORF99505 - 1.8e-13 50.5 0.1 2e-13 50.3 0.1 1.0 1 0 0 1 1 1 1 NUDIX domain HTH_AraC PF00165.23 ORF98683 - 9e-22 76.6 0.1 8.5e-10 38.5 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 ORF98683 - 6.2e-21 74.5 0.0 1e-20 73.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Vanabin-2 PF11437.8 ORF98545 - 0.17 12.1 8.1 0.36 11.0 8.1 1.6 1 1 0 1 1 1 0 Vanadium-binding protein 2 UPF0220 PF05255.11 ORF97874 - 0.00062 19.3 0.1 0.00075 19.1 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0220) RICH PF05062.12 ORF95672 - 0.064 13.6 0.8 0.11 12.9 0.8 1.4 1 0 0 1 1 1 0 RICH domain ACP_PD PF04336.12 ORF95672 - 0.14 12.6 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 Acyl carrier protein phosphodiesterase Transcript_VP30 PF11507.8 ORF93952 - 0.089 12.9 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Ebola virus-specific transcription factor VP30 Ribosomal_L29 PF00831.23 ORF92828 - 5.4e-10 39.1 1.9 1.1e-09 38.1 1.9 1.5 1 0 0 1 1 1 1 Ribosomal L29 protein FtsK_gamma PF09397.10 ORF91953 - 4e-30 103.4 0.1 5.3e-30 103.0 0.1 1.2 1 0 0 1 1 1 1 Ftsk gamma domain FeoC PF09012.10 ORF91953 - 0.14 12.3 0.0 0.31 11.1 0.0 1.5 2 0 0 2 2 2 0 FeoC like transcriptional regulator Dynactin_p62 PF05502.13 ORF91328 - 0.077 11.8 0.1 0.086 11.6 0.1 1.1 1 0 0 1 1 1 0 Dynactin p62 family Rad60-SLD PF11976.8 ORF88529 - 0.0031 17.3 0.0 0.004 17.0 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 ORF88529 - 0.016 14.9 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin family P2_N PF18628.1 ORF87924 - 0.11 12.2 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Viral coat protein P2 N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks202.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks202.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks202.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks202.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GCV_H PF01597.19 ORF86710 - 2.8e-50 169.3 0.1 3.1e-50 169.2 0.1 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein RnfC_N PF13375.6 ORF86710 - 0.00086 19.2 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain Biotin_lipoyl PF00364.22 ORF86710 - 0.0019 18.0 0.1 0.0038 17.0 0.1 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme Disulph_isomer PF06491.11 ORF83598 - 5.1 7.2 7.4 0.11 12.6 0.6 1.6 2 0 0 2 2 2 0 Disulphide isomerase MIF PF01187.18 ORF83589 - 0.0018 18.5 0.3 0.0024 18.1 0.3 1.2 1 0 0 1 1 1 1 Macrophage migration inhibitory factor (MIF) Tautomerase PF01361.21 ORF83589 - 0.002 18.0 0.4 0.0045 16.9 0.4 1.5 1 0 0 1 1 1 1 Tautomerase enzyme VP4_helical PF17478.2 ORF83589 - 0.14 11.6 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP4 helical domain Claudin_2 PF13903.6 ORF83521 - 0.12 12.1 2.7 0.12 12.1 2.7 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF4752 PF15944.5 ORF83161 - 1.6e-35 121.0 0.8 2.3e-35 120.5 0.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4752) Staph_haemo PF05480.11 ORF82332 - 0.079 12.7 0.3 1.4 8.8 0.1 2.3 2 0 0 2 2 2 0 Staphylococcus haemolytic protein Fumarate_red_C PF02300.17 ORF82332 - 0.1 12.7 3.2 1.9 8.5 0.7 2.1 2 0 0 2 2 2 0 Fumarate reductase subunit C MIF PF01187.18 ORF82174 - 0.0018 18.5 0.3 0.0024 18.1 0.3 1.2 1 0 0 1 1 1 1 Macrophage migration inhibitory factor (MIF) Tautomerase PF01361.21 ORF82174 - 0.002 18.0 0.4 0.0045 16.9 0.4 1.5 1 0 0 1 1 1 1 Tautomerase enzyme VP4_helical PF17478.2 ORF82174 - 0.14 11.6 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP4 helical domain GREB1 PF15782.5 ORF81439 - 3.3 4.7 13.0 3.6 4.6 13.0 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer PIEZO PF15917.5 ORF81439 - 8.4 5.8 18.9 10 5.5 18.9 1.1 1 0 0 1 1 1 0 Piezo LAMTOR5 PF16672.5 ORF80518 - 0.0041 17.0 1.0 23 5.0 0.0 3.8 2 1 1 4 4 4 2 Ragulator complex protein LAMTOR5 HNH_3 PF13392.6 ORF80518 - 0.0051 16.5 4.4 14 5.6 0.0 4.1 4 0 0 4 4 4 2 HNH endonuclease Imm8 PF15586.6 ORF80469 - 0.022 14.8 0.1 0.52 10.4 0.0 2.1 1 1 0 2 2 2 0 Immunity protein 8 zf-MYND PF01753.18 ORF80006 - 0.35 11.0 8.0 0.094 12.8 3.5 2.1 2 0 0 2 2 2 0 MYND finger UPF0220 PF05255.11 ORF77953 - 0.00062 19.3 0.1 0.00075 19.1 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0220) Septum_form PF13845.6 ORF7691 - 0.016 14.7 0.7 0.026 14.1 0.7 1.3 1 1 0 1 1 1 0 Septum formation SPC25 PF06703.11 ORF76030 - 2.5 7.9 4.6 0.47 10.2 0.8 1.7 2 0 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Peptidase_U4 PF03419.13 ORF76030 - 3.5 6.8 6.8 4.5 6.5 6.8 1.2 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Adhesin_P1 PF03257.13 ORF7601 - 0.035 14.6 3.3 0.043 14.3 0.3 2.1 1 1 1 2 2 2 0 Mycoplasma adhesin P1 Vanabin-2 PF11437.8 ORF750 - 0.17 12.1 8.1 0.36 11.0 8.1 1.6 1 1 0 1 1 1 0 Vanadium-binding protein 2 LPD11 PF18824.1 ORF74762 - 0.075 13.1 0.2 0.17 12.0 0.2 1.6 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 11 DM PF00751.18 ORF73471 - 0.43 10.5 4.0 0.93 9.5 4.0 1.5 1 0 0 1 1 1 0 DM DNA binding domain Keratin_assoc PF09775.9 ORF73060 - 0.053 13.2 2.9 0.071 12.8 2.3 1.5 1 1 0 1 1 1 0 Keratinocyte-associated protein 2 Arm_3 PF16186.5 ORF72815 - 1.8e-18 65.8 0.4 3.9e-18 64.7 0.4 1.6 1 0 0 1 1 1 1 Atypical Arm repeat Arm_2 PF04826.13 ORF72815 - 5.5e-05 22.8 1.0 0.2 11.1 0.4 2.0 1 1 1 2 2 2 2 Armadillo-like Arm PF00514.23 ORF72815 - 7.6e-05 22.6 0.3 0.41 10.8 0.0 3.1 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat Clathrin PF00637.20 ORF72815 - 0.0064 16.4 0.8 0.57 10.1 0.1 2.1 2 0 0 2 2 2 2 Region in Clathrin and VPS Torsin PF06309.11 ORF72815 - 0.018 15.1 0.0 0.036 14.1 0.0 1.5 1 0 0 1 1 1 0 Torsin Tic110 PF16940.5 ORF72815 - 0.019 13.5 0.0 0.019 13.5 0.0 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter RNase_J_C PF17770.1 ORF72815 - 0.033 15.2 0.5 0.13 13.3 0.1 2.0 2 1 0 2 2 2 0 Ribonuclease J C-terminal domain SASA PF03629.18 ORF72815 - 0.046 13.4 0.0 0.052 13.2 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate esterase, sialic acid-specific acetylesterase Tubulin_C PF03953.17 ORF72381 - 0.0023 18.1 0.1 0.0032 17.6 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Histone_H2A_C PF16211.5 ORF71095 - 8.8e-16 57.4 0.1 1.4e-15 56.7 0.1 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 ORF71095 - 5.8e-15 55.8 0.0 6.9e-15 55.6 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF71095 - 8.3e-06 26.0 0.0 1.3e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone AceK PF06315.11 ORF70958 - 0.015 13.8 0.1 0.017 13.7 0.1 1.0 1 0 0 1 1 1 0 Isocitrate dehydrogenase kinase/phosphatase (AceK) cIII PF08134.11 ORF69116 - 0.15 11.9 1.1 0.29 10.9 1.1 1.5 1 0 0 1 1 1 0 cIII protein family CtaG_Cox11 PF04442.14 ORF68977 - 0.088 12.8 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 Baculo_PP31 PF05311.11 ORF67826 - 0.15 11.5 1.7 0.19 11.2 1.7 1.1 1 0 0 1 1 1 0 Baculovirus 33KDa late protein (PP31) F_bP_aldolase PF01116.20 ORF66698 - 0.0017 17.9 0.2 0.0028 17.2 0.2 1.3 1 1 0 1 1 1 1 Fructose-bisphosphate aldolase class-II rve PF00665.26 ORF6504 - 9.5e-05 22.6 0.0 0.00018 21.6 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF6504 - 0.064 13.0 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Integrase core domain DUF4131 PF13567.6 ORF64170 - 4 7.1 4.9 5.4 6.6 4.9 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) CSG2 PF16965.5 ORF62923 - 0.015 14.3 4.7 0.018 14.0 4.7 1.2 1 0 0 1 1 1 0 Ceramide synthase regulator Glyco_transf_20 PF00982.21 ORF61426 - 7.7e-40 137.0 0.0 8.6e-40 136.8 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 Luteo_PO PF04662.13 ORF61426 - 0.099 12.3 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Luteovirus P0 protein HEV_ORF1 PF02444.16 ORF60732 - 0.026 15.1 2.0 0.033 14.7 2.0 1.2 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) DUF3021 PF11457.8 ORF58476 - 0.049 14.0 7.7 0.12 12.7 4.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3021) MerC PF03203.14 ORF58476 - 0.08 13.4 8.6 0.11 13.0 8.6 1.2 1 0 0 1 1 1 0 MerC mercury resistance protein PNTB PF02233.16 ORF58476 - 0.11 11.3 8.2 0.11 11.3 6.8 1.6 1 1 1 2 2 2 0 NAD(P) transhydrogenase beta subunit DUF4229 PF14012.6 ORF58476 - 0.75 9.9 5.3 0.77 9.9 3.9 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4229) IL2RB_N1 PF18707.1 ORF56360 - 0.16 12.6 2.0 0.24 11.9 0.1 1.9 2 0 0 2 2 2 0 Interleukin-2 receptor subunit beta N-terminal domain 1 IHO1 PF15771.5 ORF56360 - 7 5.3 7.6 7.7 5.1 7.6 1.1 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 DUF3343 PF11823.8 ORF55911 - 0.054 13.0 0.4 0.5 9.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) C_tripleX PF02363.19 ORF55911 - 8.3 6.9 10.0 14 6.3 3.2 3.2 2 0 0 2 2 2 0 Cysteine rich repeat Pkinase PF00069.25 ORF55216 - 1.3e-33 116.5 0.0 1.5e-33 116.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF55216 - 5.4e-18 65.2 0.0 6.5e-18 64.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF55216 - 0.00047 19.6 0.0 0.00061 19.2 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF55216 - 0.0016 17.3 0.0 0.0022 16.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF55216 - 0.044 13.4 0.0 0.059 13.0 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 zf-Mss51 PF13824.6 ORF55216 - 0.068 13.3 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 APH PF01636.23 ORF55216 - 0.11 12.4 0.0 0.73 9.7 0.0 1.9 2 0 0 2 2 2 0 Phosphotransferase enzyme family FPRL1_inhibitor PF16104.5 ORF53030 - 0.059 13.5 1.6 0.11 12.7 1.6 1.4 1 0 0 1 1 1 0 Formyl peptide receptor-like 1 inhibitory protein WWE PF02825.20 ORF52868 - 6.6e-12 45.8 0.1 9.6e-12 45.3 0.1 1.2 1 0 0 1 1 1 1 WWE domain DUF4838 PF16126.5 ORF52167 - 0.0016 17.8 3.0 0.0022 17.4 3.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4838) TraI_2_C PF07515.11 ORF52167 - 0.014 15.3 1.4 0.018 15.0 1.0 1.4 1 1 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term KilA-N PF04383.13 ORF52167 - 0.045 13.6 4.4 0.23 11.3 3.0 2.5 1 1 1 2 2 2 0 KilA-N domain MRP-S23 PF10484.9 ORF52167 - 0.12 12.6 1.3 0.21 11.8 1.3 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal protein S23 Gly_radical PF01228.21 ORF52167 - 0.17 12.4 1.3 0.28 11.7 1.3 1.3 1 0 0 1 1 1 0 Glycine radical YqzH PF14164.6 ORF52167 - 0.35 11.0 5.5 0.55 10.3 1.2 2.7 2 1 1 3 3 3 0 YqzH-like protein DUF4549 PF15082.6 ORF52074 - 0.075 12.8 0.4 0.13 12.1 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4549) PWWP PF00855.17 ORF50893 - 9.9e-13 48.3 0.1 1.4e-12 47.9 0.1 1.2 1 0 0 1 1 1 1 PWWP domain VASP_tetra PF08776.11 ORF50893 - 0.014 14.9 0.2 0.026 14.1 0.2 1.4 1 0 0 1 1 1 0 VASP tetramerisation domain MIF PF01187.18 ORF50533 - 0.0018 18.5 0.3 0.0024 18.1 0.3 1.2 1 0 0 1 1 1 1 Macrophage migration inhibitory factor (MIF) Tautomerase PF01361.21 ORF50533 - 0.002 18.0 0.4 0.0045 16.9 0.4 1.5 1 0 0 1 1 1 1 Tautomerase enzyme VP4_helical PF17478.2 ORF50533 - 0.14 11.6 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP4 helical domain TMEM52 PF14979.6 ORF45114 - 1.4 8.8 3.2 8.7 6.3 1.6 2.0 2 0 0 2 2 2 0 Transmembrane 52 Staph_haemo PF05480.11 ORF44031 - 0.079 12.7 0.3 1.4 8.8 0.1 2.3 2 0 0 2 2 2 0 Staphylococcus haemolytic protein Fumarate_red_C PF02300.17 ORF44031 - 0.1 12.7 3.2 1.9 8.5 0.7 2.1 2 0 0 2 2 2 0 Fumarate reductase subunit C PWWP PF00855.17 ORF43236 - 9.9e-13 48.3 0.1 1.4e-12 47.9 0.1 1.2 1 0 0 1 1 1 1 PWWP domain VASP_tetra PF08776.11 ORF43236 - 0.014 14.9 0.2 0.026 14.1 0.2 1.4 1 0 0 1 1 1 0 VASP tetramerisation domain DUF3124 PF11322.8 ORF42931 - 0.087 13.0 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3124) UMP1 PF05348.11 ORF42558 - 8.1e-11 42.2 1.5 9.5e-11 42.0 1.5 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 AP1AR PF15745.5 ORF42558 - 0.0029 17.3 0.1 0.0033 17.1 0.1 1.1 1 0 0 1 1 1 1 AP-1 complex-associated regulatory protein RuBisCO_large PF00016.20 ORF41944 - 0.17 11.0 0.0 0.23 10.6 0.0 1.1 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, catalytic domain RecO_C PF02565.15 ORF40999 - 0.034 14.0 0.2 0.046 13.5 0.2 1.2 1 0 0 1 1 1 0 Recombination protein O C terminal DSHCT PF08148.12 ORF40999 - 0.14 11.8 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 DSHCT (NUC185) domain RecO_C PF02565.15 ORF40972 - 0.034 14.0 0.2 0.046 13.5 0.2 1.2 1 0 0 1 1 1 0 Recombination protein O C terminal DSHCT PF08148.12 ORF40972 - 0.14 11.8 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 DSHCT (NUC185) domain DUF1402 PF07182.11 ORF4065 - 0.0084 15.2 0.0 0.0087 15.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1402) Orthopox_F7 PF05813.12 ORF38662 - 0.22 11.7 3.7 0.15 12.2 1.8 1.7 2 0 0 2 2 2 0 Orthopoxvirus F7 protein BLOC1_2 PF10046.9 ORF37719 - 0.00016 21.9 9.8 0.00016 21.9 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_TATA_bd PF12325.8 ORF37719 - 0.0046 17.2 10.6 0.27 11.4 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding Spc7 PF08317.11 ORF37719 - 0.013 14.4 8.8 0.016 14.1 8.8 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein GAS PF13851.6 ORF37719 - 0.014 14.7 13.0 0.014 14.7 12.1 1.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF37719 - 0.014 12.9 6.3 0.017 12.6 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Leu_zip PF15294.6 ORF37719 - 0.018 14.5 10.1 0.023 14.2 10.1 1.1 1 0 0 1 1 1 0 Leucine zipper Vps53_N PF04100.12 ORF37719 - 0.024 13.6 6.9 0.041 12.9 6.9 1.5 1 1 0 1 1 1 0 Vps53-like, N-terminal Baculo_PEP_C PF04513.12 ORF37719 - 0.024 14.7 6.6 0.03 14.4 6.6 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 ORF37719 - 0.049 13.7 9.6 0.36 10.9 4.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) PRKG1_interact PF15898.5 ORF37719 - 0.057 14.3 6.4 0.56 11.1 0.5 2.3 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain ZnuA PF01297.17 ORF37719 - 0.06 12.7 1.5 0.079 12.4 1.5 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic DivIC PF04977.15 ORF37719 - 0.096 12.5 9.2 2.2 8.1 1.5 2.5 1 1 1 2 2 2 0 Septum formation initiator CEP63 PF17045.5 ORF37719 - 0.097 12.6 9.8 0.41 10.5 9.8 1.8 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa Tuberin PF03542.16 ORF37719 - 0.098 11.7 2.9 0.1 11.7 2.9 1.0 1 0 0 1 1 1 0 Tuberin ATG16 PF08614.11 ORF37719 - 0.12 12.6 8.6 1.3 9.2 1.4 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) EP400_N PF15790.5 ORF37719 - 0.12 11.2 0.9 0.14 11.0 0.9 1.1 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal TSNAXIP1_N PF15739.5 ORF37719 - 0.13 12.6 0.7 0.13 12.6 0.7 2.3 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus RasGAP_C PF03836.15 ORF37719 - 0.18 11.9 8.5 2.4 8.3 2.8 2.1 1 1 1 2 2 2 0 RasGAP C-terminus Fib_alpha PF08702.10 ORF37719 - 0.21 11.8 11.1 0.6 10.3 10.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Macoilin PF09726.9 ORF37719 - 0.26 9.8 7.5 0.36 9.3 7.5 1.2 1 0 0 1 1 1 0 Macoilin family TMPIT PF07851.13 ORF37719 - 0.26 10.5 6.8 0.15 11.2 4.4 1.5 1 1 0 1 1 1 0 TMPIT-like protein Spc24 PF08286.11 ORF37719 - 0.27 11.5 10.8 0.62 10.3 3.3 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF37719 - 0.37 11.1 10.1 4.7 7.6 1.0 2.2 1 1 1 2 2 2 0 Tup N-terminal UPF0242 PF06785.11 ORF37719 - 0.66 10.1 9.6 0.78 9.8 9.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Csm2_III-A PF03750.13 ORF37719 - 0.76 10.6 5.9 0.54 11.1 1.9 2.0 1 1 1 2 2 2 0 Csm2 Type III-A BPL_N PF09825.9 ORF37719 - 0.81 8.7 4.6 0.91 8.5 4.6 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal FlaC_arch PF05377.11 ORF37719 - 0.95 9.9 13.4 49 4.4 1.0 3.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF5595 PF18077.1 ORF37719 - 1.6 8.9 8.3 1.8 8.7 2.3 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5595) USP8_interact PF08941.10 ORF37719 - 1.7 8.5 8.7 0.31 10.8 0.8 2.0 1 1 1 2 2 2 0 USP8 interacting NPV_P10 PF05531.12 ORF37719 - 3.6 8.1 10.6 4.8 7.7 7.0 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 ORF37719 - 5.6 7.7 10.9 4.3e+02 1.6 10.9 2.2 1 1 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF37719 - 6.3 7.5 8.0 14 6.4 3.1 2.5 1 1 2 3 3 3 0 SlyX Peptidase_M24_C PF16188.5 ORF36511 - 0.0062 16.6 2.2 0.011 15.8 0.4 2.1 1 1 1 2 2 2 1 C-terminal region of peptidase_M24 DUF2120 PF09893.9 ORF36511 - 0.036 14.2 1.3 0.055 13.6 1.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) TBCA PF02970.16 ORF36511 - 0.077 13.3 5.2 0.069 13.5 4.0 1.5 1 1 0 1 1 1 0 Tubulin binding cofactor A RPA_interact_M PF14767.6 ORF36511 - 8.3 7.1 12.2 15 6.3 6.6 2.6 1 1 1 2 2 2 0 Replication protein A interacting middle Osmo_CC PF08946.10 ORF35351 - 7.5e-24 83.7 8.1 9.7e-24 83.4 8.1 1.2 1 0 0 1 1 1 1 Osmosensory transporter coiled coil Sugar_tr PF00083.24 ORF35351 - 5e-10 38.8 0.6 5e-10 38.8 0.6 1.3 2 0 0 2 2 2 1 Sugar (and other) transporter DUF1043 PF06295.12 ORF35351 - 0.008 16.2 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1043) CM_2 PF01817.21 ORF35351 - 0.0084 16.4 0.6 0.015 15.6 0.6 1.4 1 0 0 1 1 1 1 Chorismate mutase type II T3SSipB PF16535.5 ORF35351 - 0.013 15.9 0.2 0.017 15.6 0.2 1.1 1 0 0 1 1 1 0 Type III cell invasion protein SipB Prefoldin PF02996.17 ORF35351 - 0.015 15.2 0.7 0.025 14.5 0.7 1.3 1 0 0 1 1 1 0 Prefoldin subunit TssO PF17561.2 ORF35351 - 0.031 14.4 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO MerR-DNA-bind PF09278.11 ORF35351 - 0.045 14.3 1.9 0.15 12.6 1.9 1.8 1 1 0 1 1 1 0 MerR, DNA binding CLZ PF16526.5 ORF35351 - 0.085 13.2 0.1 0.14 12.5 0.1 1.3 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HSBP1 PF06825.12 ORF35351 - 0.11 12.4 0.4 0.18 11.7 0.4 1.4 1 0 0 1 1 1 0 Heat shock factor binding protein 1 VIT1 PF01988.19 ORF35351 - 0.93 9.3 4.1 0.89 9.4 3.5 1.4 1 1 0 1 1 1 0 VIT family RcsF PF16358.5 ORF35226 - 0.1 12.7 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 RcsF lipoprotein DUF5326 PF17260.2 ORF34769 - 2.2 8.5 6.2 0.76 10.0 3.0 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5326) XLF PF09302.11 ORF34573 - 0.032 14.4 0.1 0.039 14.1 0.1 1.1 1 0 0 1 1 1 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component DUF4322 PF14210.6 ORF34573 - 0.059 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) DHHC PF01529.20 ORF33273 - 4.6e-20 72.1 6.7 4.6e-20 72.1 6.7 1.6 2 0 0 2 2 2 1 DHHC palmitoyltransferase DUF3943 PF13084.6 ORF31924 - 0.071 13.0 0.0 0.097 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3943) Amdase PF17645.1 ORF31924 - 0.12 12.0 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Arylmalonate decarboxylase Histone_H2A_C PF16211.5 ORF31877 - 8.8e-16 57.4 0.1 1.4e-15 56.7 0.1 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 ORF31877 - 5.8e-15 55.8 0.0 6.9e-15 55.6 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF31877 - 8.3e-06 26.0 0.0 1.3e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone FANCAA PF15146.6 ORF31347 - 0.014 14.6 0.6 0.018 14.1 0.6 1.1 1 0 0 1 1 1 0 Fanconi anemia-associated Suc_Fer-like PF06999.12 ORF31244 - 0.13 12.1 0.2 0.13 12.2 0.2 1.1 1 0 0 1 1 1 0 Sucrase/ferredoxin-like CD225 PF04505.12 ORF30075 - 0.014 15.5 0.5 0.36 11.0 0.0 2.4 2 0 0 2 2 2 0 Interferon-induced transmembrane protein CMV_1a_C PF12503.8 ORF2916 - 0.012 15.5 0.0 0.02 14.9 0.0 1.3 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein C terminal CrgA PF06781.12 ORF27303 - 0.24 11.5 0.0 25 5.0 0.0 2.4 2 1 0 2 2 2 0 Cell division protein CrgA DUF3326 PF11805.8 ORF27303 - 0.72 8.7 2.4 16 4.2 0.1 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF3326) bZIP_1 PF00170.21 ORF27004 - 0.0073 16.4 14.9 0.03 14.4 14.9 2.1 1 1 0 1 1 1 1 bZIP transcription factor DMPK_coil PF08826.10 ORF27004 - 0.021 14.9 3.6 0.045 13.9 3.6 1.6 1 0 0 1 1 1 0 DMPK coiled coil domain like DUF3922 PF13059.6 ORF27004 - 0.024 15.1 0.6 0.035 14.6 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3992) TSC22 PF01166.18 ORF27004 - 0.04 14.2 2.9 0.085 13.2 2.9 1.6 1 0 0 1 1 1 0 TSC-22/dip/bun family CHASE9 PF17153.4 ORF27004 - 0.096 12.8 5.0 0.099 12.8 4.4 1.4 1 1 0 1 1 1 0 Periplasmic sensor domain, extracellular Elongin_A PF06881.11 ORF27004 - 0.15 12.6 7.9 2.5 8.7 5.8 2.1 2 0 0 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A CRA PF06589.11 ORF26521 - 0.066 13.3 1.8 0.081 13.0 1.8 1.2 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) SVWC PF15430.6 ORF25497 - 0.35 11.2 5.9 0.94 9.8 5.9 1.9 1 1 0 1 1 1 0 Single domain von Willebrand factor type C ACOX PF01756.19 ORF21938 - 2.2e-24 86.0 1.3 2.4e-24 85.9 1.3 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase DUF5085 PF16895.5 ORF21938 - 0.00015 22.1 0.9 0.00018 21.9 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5085) Pur_DNA_glyco PF02245.16 ORF18771 - 0.062 12.7 0.0 0.079 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylpurine-DNA glycosylase (MPG) Swi6_N PF18530.1 ORF18536 - 0.21 11.7 3.6 0.077 13.1 1.3 1.5 2 0 0 2 2 2 0 Swi6 N-terminal domain HTH_37 PF13744.6 ORF18507 - 0.066 13.2 1.3 0.093 12.7 1.3 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DZR PF12773.7 ORF18005 - 0.0098 15.9 0.6 0.018 15.0 0.6 1.5 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF18005 - 0.012 16.3 0.5 0.024 15.4 0.5 1.5 1 0 0 1 1 1 0 zinc-ribbon family Cript PF10235.9 ORF18005 - 0.033 14.7 0.7 0.037 14.6 0.1 1.5 2 0 0 2 2 2 0 Microtubule-associated protein CRIPT zinc_ribbon_2 PF13240.6 ORF18005 - 0.036 13.8 5.3 0.4 10.5 4.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2HC5 PF06221.13 ORF18005 - 0.12 12.3 2.8 0.29 11.1 2.0 2.0 2 1 0 2 2 2 0 Putative zinc finger motif, C2HC5-type DUF3619 PF12279.8 ORF18005 - 0.13 12.6 0.1 0.2 12.0 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3619) NOB1_Zn_bind PF08772.11 ORF18005 - 0.14 12.4 2.3 0.22 11.7 2.3 1.5 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like HAP2-GCS1 PF10699.9 ORF152546 - 0.019 14.9 0.4 0.038 14.0 0.4 1.5 1 0 0 1 1 1 0 Male gamete fusion factor MFS_1 PF07690.16 ORF152433 - 2.8e-07 29.8 7.4 3.1e-07 29.7 7.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1858 PF08984.11 ORF152433 - 0.14 12.4 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1858) Sugar_tr PF00083.24 ORF152433 - 0.4 9.5 8.9 0.24 10.2 1.3 2.0 1 1 1 2 2 2 0 Sugar (and other) transporter Acyl_transf_3 PF01757.22 ORF151918 - 0.062 12.4 8.2 0.071 12.2 8.2 1.1 1 0 0 1 1 1 0 Acyltransferase family DUF3124 PF11322.8 ORF151221 - 0.087 13.0 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3124) Vanabin-2 PF11437.8 ORF150507 - 0.17 12.1 8.1 0.36 11.0 8.1 1.6 1 1 0 1 1 1 0 Vanadium-binding protein 2 DUF2457 PF10446.9 ORF148245 - 0.46 9.6 2.2 0.52 9.4 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Peptidase_M48 PF01435.18 ORF14563 - 0.00028 20.7 0.0 0.00035 20.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M48 WD40 PF00400.32 ORF143283 - 9.2e-14 51.6 1.1 2.8e-05 24.8 0.0 3.2 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF143283 - 8.4e-07 29.2 0.4 0.014 15.7 0.1 3.3 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain RAB3GAP2_N PF14655.6 ORF143283 - 0.0013 18.1 0.0 0.0017 17.7 0.0 1.2 1 0 0 1 1 1 1 Rab3 GTPase-activating protein regulatory subunit N-terminus CDtoxinA PF03498.14 ORF143283 - 0.0015 18.2 0.1 0.0018 17.9 0.1 1.2 1 0 0 1 1 1 1 Cytolethal distending toxin A/C domain Nup160 PF11715.8 ORF143283 - 0.023 13.3 0.2 0.1 11.2 0.0 1.8 1 1 1 2 2 2 0 Nucleoporin Nup120/160 IgG_binding_B PF01378.17 ORF143283 - 0.065 13.3 0.1 0.13 12.4 0.1 1.4 1 0 0 1 1 1 0 B domain CMV_1a_C PF12503.8 ORF14310 - 0.012 15.5 0.0 0.02 14.9 0.0 1.3 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein C terminal DUF485 PF04341.12 ORF1428 - 1.8e-32 111.2 0.0 2.1e-32 110.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF485 Virul_fac_BrkB PF03631.15 ORF1428 - 0.0071 16.0 0.5 0.009 15.7 0.5 1.1 1 0 0 1 1 1 1 Virulence factor BrkB SKG6 PF08693.10 ORF1428 - 0.0075 15.7 1.1 0.0075 15.7 1.1 1.8 2 0 0 2 2 2 1 Transmembrane alpha-helix domain MASE3 PF17159.4 ORF1428 - 0.024 14.3 0.1 0.028 14.0 0.1 1.0 1 0 0 1 1 1 0 Membrane-associated sensor domain FA_desaturase PF00487.24 ORF1428 - 0.05 13.4 0.0 0.056 13.3 0.0 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2207 PF09972.9 ORF1428 - 0.13 11.0 0.2 0.14 10.9 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Herpes_capsid PF06112.11 ORF141695 - 0.88 9.6 14.6 1.1 9.3 14.6 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Pkinase PF00069.25 ORF140693 - 1.3e-33 116.5 0.0 1.5e-33 116.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF140693 - 5.4e-18 65.2 0.0 6.5e-18 64.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF140693 - 0.00047 19.6 0.0 0.00061 19.2 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF140693 - 0.0016 17.3 0.0 0.0022 16.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF140693 - 0.044 13.4 0.0 0.059 13.0 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 zf-Mss51 PF13824.6 ORF140693 - 0.068 13.3 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 APH PF01636.23 ORF140693 - 0.11 12.4 0.0 0.73 9.7 0.0 1.9 2 0 0 2 2 2 0 Phosphotransferase enzyme family RICH PF05062.12 ORF139532 - 0.064 13.6 0.8 0.11 12.9 0.8 1.4 1 0 0 1 1 1 0 RICH domain ACP_PD PF04336.12 ORF139532 - 0.14 12.6 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 Acyl carrier protein phosphodiesterase DUF3703 PF12487.8 ORF13937 - 0.16 11.8 0.0 0.24 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3703) SQS_PSY PF00494.19 ORF139223 - 0.014 14.9 0.0 0.018 14.5 0.0 1.1 1 0 0 1 1 1 0 Squalene/phytoene synthase Ogr_Delta PF04606.12 ORF139223 - 0.087 12.8 0.7 0.14 12.2 0.7 1.3 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger Ras PF00071.22 ORF138221 - 2.3e-06 27.3 0.0 3.4e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Ras family GTP_EFTU PF00009.27 ORF138221 - 0.00038 20.1 0.2 0.00072 19.1 0.1 1.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SLT_beta PF02258.16 ORF138221 - 0.028 14.4 0.1 0.055 13.5 0.1 1.6 1 0 0 1 1 1 0 Shiga-like toxin beta subunit TMEM52 PF14979.6 ORF137761 - 1.4 8.8 3.3 8.7 6.3 1.6 2.1 2 0 0 2 2 2 0 Transmembrane 52 SVWC PF15430.6 ORF137651 - 0.35 11.2 5.9 0.94 9.8 5.9 1.9 1 1 0 1 1 1 0 Single domain von Willebrand factor type C zf-RING_14 PF17978.1 ORF136774 - 0.29 11.6 0.2 0.29 11.6 0.2 2.2 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain HU-CCDC81_euk_2 PF18289.1 ORF136757 - 0.026 14.6 0.0 0.049 13.8 0.0 1.4 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 DUF1700 PF08006.11 ORF135604 - 0.64 9.5 7.7 0.85 9.1 7.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Abi_C PF14355.6 ORF135178 - 0.1 12.7 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Abortive infection C-terminus PP2C PF00481.21 ORF135151 - 8.6e-11 42.0 0.0 9.6e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C GGACT PF06094.12 ORF13391 - 0.032 14.8 0.0 0.036 14.7 0.0 1.2 1 0 0 1 1 1 0 Gamma-glutamyl cyclotransferase, AIG2-like MtrD PF04207.12 ORF13391 - 0.072 12.8 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit D Dynactin_p62 PF05502.13 ORF132587 - 0.077 11.8 0.1 0.086 11.6 0.1 1.1 1 0 0 1 1 1 0 Dynactin p62 family CMV_1a_C PF12503.8 ORF132215 - 0.012 15.5 0.0 0.02 14.9 0.0 1.3 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein C terminal Dynactin_p22 PF07426.11 ORF131675 - 1.7e-13 50.8 4.6 2.2e-13 50.4 4.6 1.1 1 0 0 1 1 1 1 Dynactin subunit p22 DUF948 PF06103.11 ORF131675 - 0.023 15.0 0.9 0.068 13.4 0.6 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Imm3 PF14425.6 ORF131675 - 0.035 14.1 1.7 0.035 14.1 1.7 1.9 1 1 1 2 2 2 0 Immunity protein Imm3 DUF1664 PF07889.12 ORF131675 - 0.26 11.3 2.8 0.63 10.1 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Nnf1 PF03980.14 ORF131170 - 0.00022 21.6 1.1 0.00037 20.8 1.1 1.4 1 0 0 1 1 1 1 Nnf1 Spc7 PF08317.11 ORF131170 - 0.0026 16.7 8.2 0.0032 16.4 8.2 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein JAKMIP_CC3 PF16034.5 ORF131170 - 0.022 14.7 7.8 0.029 14.3 7.8 1.3 1 1 0 1 1 1 0 JAKMIP CC3 domain CENP-F_leu_zip PF10473.9 ORF131170 - 0.029 14.4 9.6 0.62 10.1 2.5 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4164 PF13747.6 ORF131170 - 0.031 14.5 5.1 0.049 13.9 2.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) Tektin PF03148.14 ORF131170 - 0.032 13.0 9.7 0.043 12.6 4.5 2.0 1 1 1 2 2 2 0 Tektin family DUF1359 PF07097.11 ORF131170 - 0.039 14.2 6.0 0.094 13.0 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1359) bZIP_2 PF07716.15 ORF131170 - 0.064 13.3 0.7 0.064 13.3 0.7 2.2 2 1 0 2 2 2 0 Basic region leucine zipper Baculo_PEP_C PF04513.12 ORF131170 - 0.11 12.5 6.6 0.18 11.8 1.2 2.0 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus LCAT PF02450.15 ORF131170 - 0.15 11.2 2.3 0.17 11.0 2.3 1.0 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase MRPL52 PF18699.1 ORF131170 - 0.19 12.0 5.3 7.3 6.8 0.1 2.2 1 1 1 2 2 2 0 Mitoribosomal protein mL52 RBD-FIP PF09457.10 ORF131170 - 0.22 11.5 1.9 5.2 7.1 0.1 2.9 3 1 0 3 3 3 0 FIP domain DUF1664 PF07889.12 ORF131170 - 0.26 11.3 7.3 3.8 7.6 5.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) AAA_23 PF13476.6 ORF131170 - 0.92 10.0 8.0 1.1 9.7 8.0 1.1 1 0 0 1 1 1 0 AAA domain SlyX PF04102.12 ORF131170 - 7.2 7.3 7.5 20 5.9 0.1 2.6 1 1 1 2 2 2 0 SlyX Orthopox_F7 PF05813.12 ORF129909 - 0.22 11.7 3.7 0.15 12.2 1.8 1.7 2 0 0 2 2 2 0 Orthopoxvirus F7 protein DUF676 PF05057.14 ORF128565 - 0.00081 19.0 0.0 0.0013 18.3 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) TRI12 PF06609.13 ORF12648 - 0.057 11.8 0.1 0.071 11.5 0.1 1.1 1 0 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) SP_C-Propep PF08999.10 ORF125348 - 0.11 12.3 0.6 0.11 12.3 0.6 1.8 2 0 0 2 2 2 0 Surfactant protein C, N terminal propeptide BLOC1_2 PF10046.9 ORF122766 - 0.00016 21.9 9.8 0.00016 21.9 9.8 1.5 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMF_TATA_bd PF12325.8 ORF122766 - 0.0046 17.2 10.6 0.27 11.4 1.3 2.2 1 1 1 2 2 2 2 TATA element modulatory factor 1 TATA binding Spc7 PF08317.11 ORF122766 - 0.013 14.4 8.8 0.016 14.1 8.8 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein GAS PF13851.6 ORF122766 - 0.014 14.7 13.0 0.014 14.7 12.1 1.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF122766 - 0.014 12.9 6.3 0.017 12.6 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Leu_zip PF15294.6 ORF122766 - 0.018 14.5 10.1 0.023 14.2 10.1 1.1 1 0 0 1 1 1 0 Leucine zipper Vps53_N PF04100.12 ORF122766 - 0.024 13.6 6.9 0.041 12.9 6.9 1.5 1 1 0 1 1 1 0 Vps53-like, N-terminal Baculo_PEP_C PF04513.12 ORF122766 - 0.024 14.7 6.6 0.03 14.4 6.6 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 ORF122766 - 0.049 13.7 9.6 0.36 10.9 4.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) PRKG1_interact PF15898.5 ORF122766 - 0.057 14.3 6.4 0.56 11.1 0.5 2.3 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain ZnuA PF01297.17 ORF122766 - 0.06 12.7 1.5 0.079 12.4 1.5 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic DivIC PF04977.15 ORF122766 - 0.096 12.5 9.2 2.2 8.1 1.5 2.5 1 1 1 2 2 2 0 Septum formation initiator CEP63 PF17045.5 ORF122766 - 0.097 12.6 9.8 0.41 10.5 9.8 1.8 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa Tuberin PF03542.16 ORF122766 - 0.098 11.7 2.9 0.1 11.7 2.9 1.0 1 0 0 1 1 1 0 Tuberin ATG16 PF08614.11 ORF122766 - 0.12 12.6 8.6 1.3 9.2 1.4 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) EP400_N PF15790.5 ORF122766 - 0.12 11.2 0.9 0.14 11.0 0.9 1.1 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal TSNAXIP1_N PF15739.5 ORF122766 - 0.13 12.6 0.7 0.13 12.6 0.7 2.3 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus RasGAP_C PF03836.15 ORF122766 - 0.18 11.9 8.5 2.4 8.3 2.8 2.1 1 1 1 2 2 2 0 RasGAP C-terminus Fib_alpha PF08702.10 ORF122766 - 0.21 11.8 11.1 0.6 10.3 10.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Macoilin PF09726.9 ORF122766 - 0.26 9.8 7.5 0.36 9.3 7.5 1.2 1 0 0 1 1 1 0 Macoilin family TMPIT PF07851.13 ORF122766 - 0.26 10.5 6.8 0.15 11.2 4.4 1.5 1 1 0 1 1 1 0 TMPIT-like protein Spc24 PF08286.11 ORF122766 - 0.27 11.5 10.8 0.62 10.3 3.3 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Tup_N PF08581.10 ORF122766 - 0.37 11.1 10.1 4.7 7.6 1.0 2.2 1 1 1 2 2 2 0 Tup N-terminal UPF0242 PF06785.11 ORF122766 - 0.66 10.1 9.6 0.78 9.8 9.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Csm2_III-A PF03750.13 ORF122766 - 0.76 10.6 5.9 0.54 11.1 1.9 2.0 1 1 1 2 2 2 0 Csm2 Type III-A BPL_N PF09825.9 ORF122766 - 0.81 8.7 4.6 0.91 8.5 4.6 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal FlaC_arch PF05377.11 ORF122766 - 0.95 9.9 13.4 49 4.4 1.0 3.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF5595 PF18077.1 ORF122766 - 1.6 8.9 8.3 1.8 8.7 2.3 2.3 1 1 2 3 3 3 0 Domain of unknown function (DUF5595) USP8_interact PF08941.10 ORF122766 - 1.7 8.5 8.7 0.31 10.8 0.8 2.0 1 1 1 2 2 2 0 USP8 interacting NPV_P10 PF05531.12 ORF122766 - 3.6 8.1 10.6 4.8 7.7 7.0 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 ORF122766 - 5.6 7.7 10.9 4.3e+02 1.6 10.9 2.2 1 1 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF122766 - 6.3 7.5 8.0 14 6.4 3.1 2.5 1 1 2 3 3 3 0 SlyX RhlB PF12300.8 ORF121886 - 0.52 10.4 9.0 0.18 11.9 6.8 1.3 1 1 0 1 1 1 0 ATP-dependent RNA helicase RhlB PhoLip_ATPase_C PF16212.5 ORF119622 - 0.23 11.2 0.0 0.26 11.0 0.0 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal DsbG_N PF18257.1 ORF119396 - 0.15 12.2 0.2 0.23 11.6 0.2 1.3 1 0 0 1 1 1 0 Disulfide isomerase DsbG N-terminal RNase_H2-Ydr279 PF09468.10 ORF11775 - 0.11 12.7 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Ydr279p protein family (RNase H2 complex component) wHTH domain MFS_1 PF07690.16 ORF117612 - 2.9e-07 29.8 0.0 3.3e-07 29.5 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ATG22 PF11700.8 ORF117612 - 0.22 10.1 5.1 0.1 11.2 0.8 1.9 1 1 1 2 2 2 0 Vacuole effluxer Atg22 like PrgI PF12666.7 ORF117612 - 0.4 11.4 0.1 0.4 11.4 0.1 1.9 2 0 0 2 2 2 0 PrgI family protein Acetyltransf_1 PF00583.25 ORF117488 - 6.8e-12 45.7 0.0 8e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF117488 - 7.7e-09 35.6 0.0 8.8e-09 35.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF117488 - 0.0004 20.8 0.0 0.00053 20.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF117488 - 0.00053 19.9 0.0 0.0011 18.9 0.0 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 ORF117488 - 0.0062 17.2 0.0 0.0074 17.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF117488 - 0.016 14.9 0.0 0.019 14.6 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 ORF117488 - 0.029 13.8 0.2 0.04 13.4 0.2 1.2 1 0 0 1 1 1 0 Putative acetyl-transferase Peptidase_S11 PF00768.20 ORF116188 - 1.7e-09 37.4 0.0 2.4e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase DUF1882 PF08966.11 ORF115756 - 0.071 13.4 2.2 0.37 11.1 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1882) GyrI-like PF06445.15 ORF115756 - 0.072 13.4 0.0 0.092 13.1 0.0 1.1 1 0 0 1 1 1 0 GyrI-like small molecule binding domain zf-C3HC4_3 PF13920.6 ORF115680 - 0.00095 19.0 16.0 0.00095 19.0 16.0 3.0 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf_UBZ PF18439.1 ORF115680 - 0.0022 17.6 17.4 0.0037 16.8 0.9 4.3 3 1 1 4 4 4 2 Ubiquitin-Binding Zinc Finger zf-C4pol PF14260.6 ORF115680 - 0.0048 17.3 9.1 0.0048 17.3 9.1 2.9 2 1 1 3 3 3 1 C4-type zinc-finger of DNA polymerase delta DpnII PF04556.12 ORF115680 - 0.0055 16.1 0.6 0.0065 15.8 0.6 1.1 1 0 0 1 1 1 1 DpnII restriction endonuclease Opy2 PF09463.10 ORF115680 - 0.02 15.2 3.8 0.02 15.2 3.8 4.2 4 0 0 4 4 4 0 Opy2 protein Prok-RING_4 PF14447.6 ORF115680 - 0.038 13.9 11.8 0.038 13.9 11.8 2.6 2 1 0 2 2 2 0 Prokaryotic RING finger family 4 zf-SCNM1 PF15803.5 ORF115421 - 0.14 11.8 1.2 0.22 11.2 0.1 1.8 2 0 0 2 2 2 0 Zinc-finger of sodium channel modifier 1 Pkinase PF00069.25 ORF114005 - 1.7e-24 86.7 0.1 1.8e-24 86.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF114005 - 5.6e-12 45.5 0.1 6.2e-12 45.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Mpv17_PMP22 PF04117.12 ORF113886 - 6.8e-06 26.2 1.4 6.8e-06 26.2 1.4 1.5 2 0 0 2 2 2 1 Mpv17 / PMP22 family FBA_2 PF07735.17 ORF112574 - 0.018 15.2 0.8 0.018 15.2 0.8 1.6 2 0 0 2 2 2 0 F-box associated DUF3417 PF11897.8 ORF112472 - 0.075 13.5 0.1 0.13 12.8 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3417) TCP PF03634.13 ORF112224 - 0.28 11.8 7.2 0.4 11.2 7.2 1.2 1 0 0 1 1 1 0 TCP family transcription factor zf-RING_2 PF13639.6 ORF11203 - 2.5e-13 50.1 7.0 3.5e-13 49.6 7.0 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF11203 - 1.7e-08 34.1 4.5 1.7e-08 34.1 4.5 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF11203 - 2.4e-08 33.7 5.0 3.4e-08 33.2 5.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF11203 - 9.5e-08 31.9 3.3 1e-07 31.8 0.7 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF11203 - 1.2e-07 31.9 7.4 1.8e-07 31.4 7.4 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF11203 - 3.7e-07 30.0 5.4 5.4e-07 29.5 5.4 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF11203 - 6.3e-07 29.4 3.0 9.6e-07 28.8 3.0 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF11203 - 1e-06 28.5 4.8 1.5e-06 28.0 4.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF11203 - 1.1e-06 28.4 7.1 1.7e-06 27.7 7.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF11203 - 1.2e-05 25.1 5.6 2e-05 24.3 5.6 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF11203 - 0.0003 20.4 5.4 0.00049 19.7 5.4 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF11203 - 0.0082 16.3 5.6 0.0082 16.3 5.6 1.8 1 1 1 2 2 2 1 RING-variant domain FANCL_C PF11793.8 ORF11203 - 0.023 14.9 8.2 0.14 12.3 8.2 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_1 PF14446.6 ORF11203 - 0.068 13.1 2.1 0.068 13.1 2.1 2.0 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4_4 PF15227.6 ORF11203 - 0.11 12.6 7.1 1.5 9.0 7.2 2.2 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF11203 - 0.12 12.2 5.4 0.23 11.3 5.4 1.5 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 ORF11203 - 0.34 11.3 4.8 0.55 10.6 4.8 1.5 1 1 0 1 1 1 0 RING-like domain DUF3417 PF11897.8 ORF111867 - 0.075 13.5 0.1 0.13 12.8 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3417) PfkB PF00294.24 ORF108688 - 6.1e-28 98.0 0.1 7.2e-28 97.8 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Pox_P35 PF03213.14 ORF1082 - 0.06 12.6 5.0 0.074 12.3 5.0 1.1 1 0 0 1 1 1 0 Poxvirus P35 protein Aldedh PF00171.22 ORF1082 - 0.14 10.7 0.6 0.18 10.3 0.6 1.1 1 0 0 1 1 1 0 Aldehyde dehydrogenase family HTH_40 PF14493.6 ORF1082 - 1.2 9.7 7.5 0.26 11.8 2.3 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain Hom_end_hint PF05203.16 ORF1082 - 3.3 7.6 6.5 0.83 9.6 2.7 1.7 1 1 1 2 2 2 0 Hom_end-associated Hint Tmemb_170 PF10190.9 ORF106728 - 0.0012 19.1 1.6 0.0019 18.6 1.6 1.2 1 0 0 1 1 1 1 Putative transmembrane protein 170 PAN_2 PF08276.11 ORF106469 - 0.055 13.6 1.1 0.055 13.6 1.1 3.0 2 1 1 3 3 3 0 PAN-like domain MAGI_u5 PF16666.5 ORF106469 - 0.16 12.2 1.9 1.8 8.7 0.2 2.1 1 1 1 2 2 2 0 Unstructured region on MAGI CEP209_CC5 PF16574.5 ORF105034 - 0.037 14.2 1.3 0.078 13.1 1.3 1.5 1 1 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 CEP63 PF17045.5 ORF105034 - 0.14 12.0 2.0 0.16 11.9 2.0 1.1 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa ComGF PF15980.5 ORF105034 - 0.23 11.8 4.3 0.12 12.8 0.7 2.0 1 1 1 2 2 2 0 Putative Competence protein ComGF Glyoxalase PF00903.25 ORF101937 - 2e-22 79.8 0.0 2.2e-22 79.6 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF101937 - 1.2e-11 44.8 0.0 1.5e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 ORF101937 - 3.7e-06 27.2 0.0 4.5e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 ORF101937 - 2.6e-05 24.1 0.0 3.7e-05 23.6 0.0 1.2 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 ORF101937 - 6.7e-05 23.6 0.0 0.00011 23.0 0.0 1.4 1 1 0 1 1 1 1 Glyoxalase-like domain SP2 PF03014.14 ORF10140 - 0.21 10.0 0.8 0.28 9.6 0.8 1.1 1 0 0 1 1 1 0 Structural protein 2 BACON PF13004.7 ORF100019 - 0.052 13.5 0.1 0.099 12.7 0.1 1.4 1 0 0 1 1 1 0 Putative binding domain, N-terminal SLR1-BP PF07333.12 NODE_49098_length_382_cov_1.409222_g41213_i0forward_frame_1 - 7.5 7.1 11.6 0.49 10.9 5.0 2.1 1 1 1 2 2 2 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Lyase_1 PF00206.20 NODE_49092_length_382_cov_2.334294_g41207_i0reverse_frame_1 - 1.3e-44 152.9 0.4 1.4e-44 152.7 0.4 1.0 1 0 0 1 1 1 1 Lyase ADH_N PF08240.12 NODE_49092_length_382_cov_2.334294_g41207_i0reverse_frame_1 - 0.076 12.9 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain Na_Pi_cotrans PF02690.15 NODE_49090_length_382_cov_2.452450_g41205_i0forward_frame_1 - 0.14 12.3 0.1 0.2 11.7 0.1 1.2 1 0 0 1 1 1 0 Na+/Pi-cotransporter Usp PF00582.26 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.011 16.2 9.0 0.034 14.7 9.0 1.8 1 1 0 1 1 1 0 Universal stress protein family NARP1 PF12569.8 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.46 9.3 16.0 0.53 9.1 16.0 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Raftlin PF15250.6 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.65 8.7 8.6 0.72 8.5 8.6 1.0 1 0 0 1 1 1 0 Raftlin Rtf2 PF04641.12 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.72 9.2 16.2 0.85 8.9 16.2 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger GAGA_bind PF06217.12 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 0.91 9.8 11.2 1 9.6 11.2 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family MDM10 PF12519.8 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 1.7 7.4 7.4 1.9 7.2 7.4 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 Neur_chan_memb PF02932.16 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 2.1 8.3 5.4 2.4 8.1 5.4 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CDC45 PF02724.14 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 2.6 6.2 11.2 2.9 6.1 11.2 1.0 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 5.5 6.7 14.3 6.8 6.4 14.3 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 UPF0767 PF15990.5 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 6.6 7.0 6.3 1.7 8.8 1.5 2.2 1 1 2 3 3 3 0 UPF0767 family Presenilin PF01080.17 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 8.8 5.0 12.1 9.9 4.8 12.1 1.0 1 0 0 1 1 1 0 Presenilin AP-5_subunit_s1 PF15001.6 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_1 - 9.6 6.1 8.6 11 6.0 8.6 1.1 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 TK PF00265.18 NODE_49085_length_382_cov_2.711816_g41200_i0forward_frame_1 - 1.4e-37 129.2 0.2 1.7e-37 129.0 0.2 1.1 1 0 0 1 1 1 1 Thymidine kinase zf-C4pol PF14260.6 NODE_49085_length_382_cov_2.711816_g41200_i0forward_frame_1 - 0.014 15.8 3.2 0.27 11.7 0.9 2.1 1 1 1 2 2 2 0 C4-type zinc-finger of DNA polymerase delta HypA PF01155.19 NODE_49085_length_382_cov_2.711816_g41200_i0forward_frame_1 - 0.045 13.8 0.2 0.068 13.2 0.2 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Nop10p PF04135.12 NODE_49076_length_382_cov_4.293948_g41191_i0reverse_frame_1 - 6.9 6.8 7.6 0.51 10.4 2.0 1.9 2 1 1 3 3 3 0 Nucleolar RNA-binding protein, Nop10p family DUF2067 PF09840.9 NODE_49073_length_382_cov_27.965418_g41188_i0reverse_frame_1 - 0.026 14.1 0.7 0.054 13.1 0.1 1.8 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2067) BIRC6 PF12356.8 NODE_49073_length_382_cov_27.965418_g41188_i0reverse_frame_1 - 0.036 13.5 0.7 0.047 13.1 0.7 1.2 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 LAGLIDADG_1 PF00961.19 NODE_49068_length_382_cov_45.054755_g41183_i0forward_frame_1 - 0.46 11.5 6.8 0.55 11.2 6.5 1.3 1 1 0 1 1 1 0 LAGLIDADG endonuclease SR-25 PF10500.9 NODE_49054_length_382_cov_70.446686_g41169_i0reverse_frame_1 - 4.6 6.8 7.1 4.4 6.8 3.5 1.9 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein YacG PF03884.14 NODE_49053_length_382_cov_73.579251_g41168_i0reverse_frame_1 - 0.068 12.9 0.3 0.068 12.9 0.3 2.7 3 0 0 3 3 3 0 DNA gyrase inhibitor YacG YqgF PF14639.6 NODE_49050_length_382_cov_77.867435_g41166_i0reverse_frame_1 - 0.072 12.9 0.1 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 Holliday-junction resolvase-like of SPT6 DUF2065 PF09838.9 NODE_49044_length_382_cov_117.599424_g41160_i0reverse_frame_1 - 0.15 12.1 1.1 2 8.5 0.1 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) Auto_anti-p27 PF06677.12 NODE_49042_length_382_cov_122.697406_g41158_i0reverse_frame_1 - 0.009 16.2 0.8 0.021 15.0 0.8 1.6 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TAT_ubiq PF07706.12 NODE_49041_length_382_cov_128.544669_g41157_i0reverse_frame_1 - 0.099 12.9 0.1 0.24 11.6 0.1 1.6 1 0 0 1 1 1 0 Aminotransferase ubiquitination site TPR_MLP1_2 PF07926.12 NODE_49035_length_382_cov_173.054755_g41151_i0forward_frame_1 - 0.37 10.9 5.9 0.54 10.3 4.1 2.1 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Viral_P18 PF04521.13 NODE_49035_length_382_cov_173.054755_g41151_i0forward_frame_1 - 0.6 9.9 3.6 0.62 9.8 0.4 2.1 2 1 0 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein T6PP_N PF18572.1 NODE_49032_length_382_cov_267.481268_g41148_i0reverse_frame_1 - 4.5 7.2 8.9 0.96 9.3 3.8 2.0 1 1 1 2 2 2 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain GAGA PF09237.11 NODE_49014_length_383_cov_1.695402_g41130_i0reverse_frame_1 - 0.00039 20.2 0.0 0.00092 19.0 0.0 1.7 1 0 0 1 1 1 1 GAGA factor Tctex-1 PF03645.13 NODE_49014_length_383_cov_1.695402_g41130_i0reverse_frame_1 - 0.052 13.8 1.2 0.058 13.6 1.2 1.3 1 1 0 1 1 1 0 Tctex-1 family DUF167 PF02594.16 NODE_49011_length_383_cov_1.974138_g41127_i0reverse_frame_1 - 0.031 14.4 0.0 0.044 13.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised ACR, YggU family COG1872 Pox_A14 PF05767.12 NODE_49004_length_383_cov_2.356322_g41120_i0forward_frame_1 - 0.019 15.1 0.4 0.027 14.6 0.4 1.3 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 Ndc1_Nup PF09531.10 NODE_48984_length_383_cov_4.295977_g41100_i0forward_frame_1 - 1.9 7.1 9.5 2.1 6.9 9.5 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Pox_MCEL PF03291.16 NODE_48968_length_383_cov_71.827586_g41084_i0reverse_frame_1 - 1.4e-11 44.1 4.2 1.9e-11 43.7 4.2 1.1 1 0 0 1 1 1 1 mRNA capping enzyme DUF5516 PF17637.2 NODE_48946_length_383_cov_138.091954_g41062_i0reverse_frame_1 - 0.17 11.6 2.6 0.68 9.7 2.6 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5516) Chordopox_L2 PF05803.12 NODE_48945_length_383_cov_142.051724_g41061_i0forward_frame_1 - 0.12 12.2 8.6 0.22 11.4 8.6 1.5 1 0 0 1 1 1 0 Chordopoxvirus L2 protein zf_UBZ PF18439.1 NODE_48944_length_383_cov_147.255747_g41060_i0reverse_frame_1 - 0.14 11.8 3.3 5.5 6.7 0.4 2.6 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger Fungal_lectin PF07938.12 NODE_48944_length_383_cov_147.255747_g41060_i0forward_frame_1 - 0.089 12.2 0.0 0.095 12.1 0.0 1.1 1 0 0 1 1 1 0 Fungal fucose-specific lectin DUF4023 PF13215.6 NODE_48944_length_383_cov_147.255747_g41060_i0forward_frame_1 - 0.17 11.9 0.6 0.17 11.9 0.6 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF4023) eIF3_subunit PF08597.10 NODE_48944_length_383_cov_147.255747_g41060_i0forward_frame_1 - 4.4 7.1 20.5 7 6.5 20.5 1.3 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks203.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks203.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks203.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks203.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Mpv17_PMP22 PF04117.12 NODE_48942_length_383_cov_207.382184_g41058_i0reverse_frame_1 - 1.1e-13 51.2 1.1 1.6e-13 50.6 1.1 1.3 1 0 0 1 1 1 1 Mpv17 / PMP22 family Poly_export PF02563.16 NODE_48942_length_383_cov_207.382184_g41058_i0reverse_frame_1 - 0.11 12.7 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis/export protein Lamprin PF06403.11 NODE_48939_length_383_cov_230.660920_g41055_i0forward_frame_1 - 0.63 10.0 30.8 1.4 8.9 19.7 3.2 1 1 1 2 2 2 0 Lamprin Med16 PF11635.8 NODE_48937_length_383_cov_254.790230_g41053_i0forward_frame_1 - 0.37 8.7 1.5 0.43 8.4 1.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 Trefoil PF00088.18 NODE_48937_length_383_cov_254.790230_g41053_i0forward_frame_1 - 1.8 8.5 13.5 1.2 9.1 0.5 2.6 2 1 0 2 2 2 0 Trefoil (P-type) domain NDUF_B7 PF05676.13 NODE_48934_length_383_cov_1371.206897_g41051_i0forward_frame_1 - 2.7e-05 23.8 1.2 0.00028 20.5 0.1 2.2 2 0 0 2 2 2 2 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) DUF4746 PF15928.5 NODE_48932_length_383_cov_3621.537356_g41049_i0reverse_frame_1 - 0.05 13.0 9.5 0.053 12.9 9.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) RNA_pol_3_Rpc31 PF11705.8 NODE_48932_length_383_cov_3621.537356_g41049_i0reverse_frame_1 - 0.13 12.4 11.5 0.15 12.3 11.5 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 NOA36 PF06524.12 NODE_48932_length_383_cov_3621.537356_g41049_i0reverse_frame_1 - 6.2 6.0 9.4 7.3 5.8 9.4 1.1 1 0 0 1 1 1 0 NOA36 protein PHD PF00628.29 NODE_48924_length_384_cov_2.002865_g41041_i0forward_frame_1 - 0.021 14.7 0.6 0.063 13.2 0.2 1.9 2 0 0 2 2 2 0 PHD-finger bZIP_1 PF00170.21 NODE_48903_length_384_cov_6.495702_g41020_i0reverse_frame_1 - 5.4e-05 23.2 15.2 0.00015 21.8 15.2 1.8 1 1 0 1 1 1 1 bZIP transcription factor UPF0242 PF06785.11 NODE_48903_length_384_cov_6.495702_g41020_i0reverse_frame_1 - 0.2 11.7 8.0 0.24 11.5 8.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3287 PF11690.8 NODE_48903_length_384_cov_6.495702_g41020_i0reverse_frame_1 - 0.21 11.3 6.2 0.36 10.6 6.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3287) DUF5592 PF17332.2 NODE_48903_length_384_cov_6.495702_g41020_i0forward_frame_1 - 0.4 11.3 14.4 0.12 12.9 6.8 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5592) ATP1G1_PLM_MAT8 PF02038.16 NODE_48868_length_384_cov_195.426934_g40986_i0reverse_frame_1 - 0.023 14.1 0.0 5.6 6.5 0.0 2.3 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family SpoIISB_antitox PF14185.6 NODE_48854_length_384_cov_4733.120344_g40973_i0forward_frame_1 - 0.033 14.1 0.5 0.092 12.6 0.1 1.9 1 1 1 2 2 2 0 Antitoxin SpoIISB, type II toxin-antitoxin system Me-amine-dh_L PF02975.14 NODE_48851_length_384_cov_13080.054441_g40970_i0reverse_frame_1 - 0.28 11.7 4.6 0.74 10.3 0.3 2.2 1 1 1 2 2 2 0 Methylamine dehydrogenase, L chain Lung_7-TM_R PF06814.13 NODE_48850_length_385_cov_1.265714_g40969_i0forward_frame_2 - 4.5e-14 52.4 8.7 4.8e-14 52.3 8.7 1.0 1 0 0 1 1 1 1 Lung seven transmembrane receptor GpcrRhopsn4 PF10192.9 NODE_48850_length_385_cov_1.265714_g40969_i0forward_frame_2 - 0.00019 21.0 11.4 0.0002 20.9 11.4 1.1 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain DUF1134 PF06577.12 NODE_48850_length_385_cov_1.265714_g40969_i0forward_frame_2 - 0.093 12.5 0.2 0.12 12.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1134) Pro_sub2 PF18513.1 NODE_48848_length_385_cov_1.331429_g40967_i0reverse_frame_2 - 0.015 15.5 2.2 0.021 15.0 0.7 1.9 1 1 0 2 2 2 0 Prodomain subtilisin 2 Ezh2_MCSS PF18600.1 NODE_48847_length_385_cov_1.414286_g40966_i0reverse_frame_3 - 0.15 11.7 1.7 0.21 11.3 0.5 1.9 2 0 0 2 2 2 0 MCSS domain DSPc PF00782.20 NODE_48846_length_385_cov_1.548571_g40965_i0reverse_frame_2 - 2.8e-11 43.4 0.1 3.3e-11 43.1 0.1 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_48846_length_385_cov_1.548571_g40965_i0reverse_frame_2 - 0.00064 19.4 0.0 0.00071 19.2 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase RE_CfrBI PF09516.10 NODE_48846_length_385_cov_1.548571_g40965_i0reverse_frame_2 - 0.06 12.8 0.1 0.11 11.8 0.0 1.4 1 1 1 2 2 2 0 CfrBI restriction endonuclease DUF5392 PF17370.2 NODE_48843_length_385_cov_1.794286_g40962_i0forward_frame_3 - 0.19 11.8 0.8 0.28 11.2 0.4 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5392) Prok-RING_1 PF14446.6 NODE_48837_length_385_cov_2.040000_g40956_i0forward_frame_2 - 0.00088 19.2 0.4 0.0019 18.1 0.4 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 NOB1_Zn_bind PF08772.11 NODE_48837_length_385_cov_2.040000_g40956_i0forward_frame_2 - 0.003 17.7 2.6 0.0033 17.5 1.5 1.8 1 1 1 2 2 2 1 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 NODE_48837_length_385_cov_2.040000_g40956_i0forward_frame_2 - 0.02 14.6 1.6 0.02 14.6 1.6 2.9 3 0 0 3 3 3 0 zinc-ribbon domain HypA PF01155.19 NODE_48837_length_385_cov_2.040000_g40956_i0forward_frame_2 - 3.2 7.8 6.1 0.27 11.3 1.6 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RING_11 PF17123.5 NODE_48837_length_385_cov_2.040000_g40956_i0forward_frame_2 - 4.7 7.0 8.5 1.9 8.3 5.5 1.9 2 0 0 2 2 2 0 RING-like zinc finger DcuC PF03606.15 NODE_48836_length_385_cov_2.051429_g40955_i0reverse_frame_3 - 7.3e-26 90.6 0.6 9.1e-26 90.3 0.6 1.1 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier Methyltransf_13 PF08421.11 NODE_48836_length_385_cov_2.051429_g40955_i0forward_frame_2 - 0.012 15.8 0.1 0.021 15.1 0.1 1.3 1 0 0 1 1 1 0 Putative zinc binding domain Fe-S_biosyn PF01521.20 NODE_48832_length_385_cov_2.248571_g40951_i0forward_frame_2 - 0.053 13.7 0.0 0.071 13.3 0.0 1.2 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis EutK_C PF16365.5 NODE_48829_length_385_cov_2.391429_g40948_i0forward_frame_2 - 0.11 12.5 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilization protein EutK C-terminus RANK_CRD_2 PF18278.1 NODE_48828_length_385_cov_2.677143_g40947_i0reverse_frame_3 - 0.16 12.2 2.9 1.8 8.8 0.3 2.4 2 0 0 2 2 2 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 HTH_ABP1_N PF18107.1 NODE_48828_length_385_cov_2.677143_g40947_i0reverse_frame_2 - 0.087 12.5 0.3 0.46 10.2 0.0 2.0 2 0 0 2 2 2 0 Fission yeast centromere protein N-terminal domain AtpR PF12966.7 NODE_48827_length_385_cov_2.722857_g40946_i0forward_frame_2 - 0.06 13.8 0.3 0.086 13.3 0.3 1.2 1 0 0 1 1 1 0 N-ATPase, AtpR subunit HIF-1a_CTAD PF08778.10 NODE_48826_length_385_cov_2.731429_g40945_i0reverse_frame_3 - 0.12 12.0 0.6 0.37 10.4 0.1 1.9 2 0 0 2 2 2 0 HIF-1 alpha C terminal transactivation domain PsiF_repeat PF07769.14 NODE_48826_length_385_cov_2.731429_g40945_i0forward_frame_2 - 0.2 11.6 0.7 0.35 10.8 0.7 1.4 1 0 0 1 1 1 0 psiF repeat SIS PF01380.22 NODE_48820_length_385_cov_4.102857_g40939_i0reverse_frame_2 - 1.5e-11 44.2 0.3 2e-11 43.9 0.3 1.2 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 NODE_48820_length_385_cov_4.102857_g40939_i0reverse_frame_2 - 2e-07 31.1 0.6 1.1e-05 25.5 0.1 2.2 1 1 1 2 2 2 2 SIS domain FBPase_glpX PF03320.13 NODE_48820_length_385_cov_4.102857_g40939_i0reverse_frame_2 - 0.026 13.4 0.6 0.15 10.9 0.1 1.9 2 0 0 2 2 2 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DUF4773 PF15998.5 NODE_48819_length_385_cov_4.202857_g40938_i0forward_frame_3 - 0.19 12.2 0.7 0.38 11.3 0.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4773) DUF4665 PF15679.5 NODE_48815_length_385_cov_22.491429_g40934_i0forward_frame_3 - 0.026 15.1 1.6 0.046 14.3 1.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4665) KcnmB2_inactiv PF09303.10 NODE_48814_length_385_cov_22.862857_g40933_i0reverse_frame_3 - 0.12 12.2 0.1 0.27 11.1 0.1 1.6 1 0 0 1 1 1 0 KCNMB2, ball and chain domain Ras PF00071.22 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 4.2e-08 32.9 0.0 7.1e-08 32.2 0.0 1.3 1 1 0 1 1 1 1 Ras family Roc PF08477.13 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 5.3e-08 33.1 0.0 1.1e-07 32.1 0.0 1.5 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 0.015 14.8 0.0 0.02 14.4 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family G-alpha PF00503.20 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 0.017 14.3 0.1 0.021 14.0 0.1 1.2 1 0 0 1 1 1 0 G-protein alpha subunit TniB PF05621.11 NODE_48813_length_385_cov_41.037143_g40932_i0forward_frame_3 - 0.093 12.1 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein NCBP3 PF10309.9 NODE_48810_length_385_cov_54.160000_g40929_i0reverse_frame_2 - 0.033 14.0 0.0 0.066 13.1 0.0 1.6 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 PIG-H PF10181.9 NODE_48802_length_385_cov_91.742857_g40921_i0reverse_frame_2 - 4.4e-13 48.9 0.1 6.6e-13 48.3 0.1 1.2 1 0 0 1 1 1 1 GPI-GlcNAc transferase complex, PIG-H component DUF4431 PF14485.6 NODE_48800_length_385_cov_95.051429_g40919_i0reverse_frame_3 - 0.085 12.7 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4431) TssN PF17555.2 NODE_48791_length_385_cov_9360.302857_g40911_i0reverse_frame_3 - 3.7 6.9 5.2 0.41 10.0 0.4 1.7 2 0 0 2 2 2 0 Type VI secretion system, TssN HJURP_mid PF12346.8 NODE_48788_length_386_cov_1.156695_g40908_i0reverse_frame_2 - 0.016 15.6 0.8 0.016 15.6 0.8 1.8 1 1 1 2 2 2 0 Holliday junction recognition protein-associated repeat Lamprin PF06403.11 NODE_48785_length_386_cov_1.663818_g40905_i0reverse_frame_3 - 0.056 13.4 0.1 0.064 13.2 0.1 1.1 1 0 0 1 1 1 0 Lamprin Asp PF00026.23 NODE_48784_length_386_cov_1.698006_g40904_i0forward_frame_2 - 0.00013 21.5 0.0 0.00015 21.3 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease E3_binding PF02817.17 NODE_48784_length_386_cov_1.698006_g40904_i0forward_frame_2 - 0.053 13.9 0.0 0.085 13.2 0.0 1.3 1 0 0 1 1 1 0 e3 binding domain TAXi_C PF14541.6 NODE_48784_length_386_cov_1.698006_g40904_i0forward_frame_2 - 0.069 12.9 0.0 0.19 11.5 0.0 1.7 1 1 0 1 1 1 0 Xylanase inhibitor C-terminal DUF4843 PF16132.5 NODE_48782_length_386_cov_1.723647_g40902_i0forward_frame_2 - 0.0071 15.9 0.1 0.01 15.4 0.1 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4843) OTT_1508_deam PF14441.6 NODE_48781_length_386_cov_1.737892_g40901_i0reverse_frame_3 - 0.0045 17.0 0.4 0.0082 16.1 0.4 1.6 1 0 0 1 1 1 1 OTT_1508-like deaminase DUF3818 PF12825.7 NODE_48781_length_386_cov_1.737892_g40901_i0reverse_frame_3 - 0.012 14.6 0.5 0.013 14.5 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function in PX-proteins (DUF3818) Helicase_C PF00271.31 NODE_48781_length_386_cov_1.737892_g40901_i0forward_frame_3 - 0.00078 19.8 0.6 0.0026 18.1 0.1 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Mtr2 PF10429.9 NODE_48781_length_386_cov_1.737892_g40901_i0forward_frame_3 - 0.0051 16.8 0.1 0.0079 16.2 0.1 1.3 1 0 0 1 1 1 1 Nuclear pore RNA shuttling protein Mtr2 DUF4018 PF13210.6 NODE_48780_length_386_cov_1.797721_g40900_i0forward_frame_2 - 0.018 14.8 0.6 0.022 14.6 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) Chordopox_A30L PF06015.12 NODE_48772_length_386_cov_2.324786_g40892_i0forward_frame_3 - 0.033 14.0 3.3 0.055 13.3 2.5 1.8 1 1 0 1 1 1 0 Chordopoxvirus A30L protein ABC_membrane PF00664.23 NODE_48768_length_386_cov_2.666667_g40888_i0reverse_frame_3 - 1.3e-34 120.1 6.5 1.4e-34 120.0 6.5 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Wzy_C PF04932.15 NODE_48768_length_386_cov_2.666667_g40888_i0reverse_frame_3 - 0.16 11.6 3.0 0.23 11.1 3.0 1.2 1 0 0 1 1 1 0 O-Antigen ligase DUF2024 PF09630.10 NODE_48763_length_386_cov_3.333333_g40883_i0forward_frame_3 - 0.59 10.0 3.3 0.88 9.5 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2024) FadA PF09403.10 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.00073 20.0 6.9 0.0011 19.5 6.9 1.3 1 0 0 1 1 1 1 Adhesion protein FadA CENP-F_leu_zip PF10473.9 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.00081 19.4 2.1 0.0011 19.0 2.1 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HMMR_N PF15905.5 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.001 18.6 4.2 0.001 18.6 4.2 1.3 2 0 0 2 2 2 1 Hyaluronan mediated motility receptor N-terminal DUF4618 PF15397.6 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.0032 16.9 6.7 0.19 11.1 0.7 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4618) CENP-K PF11802.8 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.0038 16.9 6.3 0.0046 16.6 6.3 1.0 1 0 0 1 1 1 1 Centromere-associated protein K FlaC_arch PF05377.11 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.018 15.5 1.6 1.5 9.3 0.8 2.3 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) PrmA PF06325.13 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.019 14.4 1.5 0.022 14.2 1.5 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) G10 PF01125.17 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.026 14.3 1.6 0.036 13.8 1.6 1.3 1 0 0 1 1 1 0 G10 protein Fib_alpha PF08702.10 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.028 14.6 3.0 0.053 13.7 3.0 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.045 13.8 2.9 0.14 12.2 1.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Tup_N PF08581.10 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.073 13.4 6.4 0.53 10.6 1.0 2.3 1 1 1 2 2 2 0 Tup N-terminal UPF0242 PF06785.11 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.089 12.9 4.8 0.12 12.4 4.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3450 PF11932.8 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.13 11.5 1.9 0.6 9.4 0.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF724 PF05266.14 NODE_48756_length_386_cov_12.629630_g40876_i0reverse_frame_3 - 0.18 11.6 5.8 0.27 11.0 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Flavodoxin_3 PF12641.7 NODE_48750_length_386_cov_57.225071_g40870_i0forward_frame_3 - 0.015 15.0 1.9 0.02 14.6 1.9 1.1 1 0 0 1 1 1 0 Flavodoxin domain DUF5623 PF18536.1 NODE_48749_length_386_cov_59.045584_g40869_i0reverse_frame_2 - 0.21 11.9 0.6 3.3 8.0 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5623) DnaJ_CXXCXGXG PF00684.19 NODE_48744_length_386_cov_79.142450_g40864_i0reverse_frame_3 - 0.015 15.6 6.7 0.12 12.7 6.7 2.2 1 1 0 1 1 1 0 DnaJ central domain DUF5351 PF17302.2 NODE_48744_length_386_cov_79.142450_g40864_i0reverse_frame_3 - 2.1 8.6 14.5 4.1 7.7 3.1 2.9 2 1 0 2 2 2 0 Family of unknown function (DUF5351) Axin_b-cat_bind PF08833.10 NODE_48744_length_386_cov_79.142450_g40864_i0forward_frame_3 - 0.5 10.5 3.5 0.45 10.7 0.9 2.1 2 0 0 2 2 2 0 Axin beta-catenin binding domain NST1 PF13945.6 NODE_48741_length_386_cov_83.239316_g40861_i0reverse_frame_3 - 0.024 14.8 0.7 0.03 14.4 0.7 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator DUF2228 PF10228.9 NODE_48741_length_386_cov_83.239316_g40861_i0reverse_frame_3 - 0.04 13.7 0.4 0.047 13.4 0.4 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2228) DUF2661 PF10860.8 NODE_48738_length_386_cov_85.373219_g40858_i0reverse_frame_3 - 0.048 13.8 1.2 0.092 12.9 0.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2661) Keratin PF02422.16 NODE_48737_length_386_cov_86.914530_g40857_i0forward_frame_3 - 0.077 12.7 0.8 0.13 12.0 0.8 1.5 1 0 0 1 1 1 0 Keratin DUF4596 PF15363.6 NODE_48737_length_386_cov_86.914530_g40857_i0forward_frame_2 - 0.036 14.3 0.0 0.15 12.3 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4596) RCC1_2 PF13540.6 NODE_48736_length_386_cov_93.752137_g40856_i0reverse_frame_3 - 0.00078 19.2 0.2 0.16 11.8 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Zip PF02535.22 NODE_48736_length_386_cov_93.752137_g40856_i0forward_frame_3 - 1.6 7.8 4.0 2.2 7.4 4.0 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter MyTH4 PF00784.17 NODE_48736_length_386_cov_93.752137_g40856_i0forward_frame_2 - 0.26 11.8 3.9 2.6 8.6 0.4 2.1 2 0 0 2 2 2 0 MyTH4 domain XK-related PF09815.9 NODE_48735_length_386_cov_96.367521_g40855_i0reverse_frame_3 - 0.039 13.0 0.3 0.075 12.1 0.0 1.5 2 0 0 2 2 2 0 XK-related protein IQ PF00612.27 NODE_48733_length_386_cov_129.427350_g40853_i0reverse_frame_3 - 0.00083 18.9 9.9 0.01 15.6 0.1 3.5 3 0 0 3 3 3 2 IQ calmodulin-binding motif Peroxin-13_N PF04088.13 NODE_48733_length_386_cov_129.427350_g40853_i0reverse_frame_3 - 0.016 15.5 6.8 0.023 15.0 6.8 1.1 1 0 0 1 1 1 0 Peroxin 13, N-terminal region DUF2992 PF11208.8 NODE_48733_length_386_cov_129.427350_g40853_i0reverse_frame_3 - 0.87 9.8 18.8 1.3 9.3 18.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) DUF724 PF05266.14 NODE_48733_length_386_cov_129.427350_g40853_i0reverse_frame_3 - 3.2 7.5 14.5 4.3 7.1 14.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Biotin_carb_C PF02785.19 NODE_48732_length_386_cov_136.113960_g40852_i0reverse_frame_3 - 0.15 12.2 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Biotin carboxylase C-terminal domain DUF5012 PF16404.5 NODE_48731_length_386_cov_139.039886_g40851_i0forward_frame_2 - 0.35 11.0 2.4 9.2 6.4 1.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5012) Me-amine-dh_L PF02975.14 NODE_48727_length_386_cov_178.102564_g40847_i0forward_frame_2 - 0.039 14.5 6.0 0.057 13.9 6.0 1.3 1 0 0 1 1 1 0 Methylamine dehydrogenase, L chain Glycolytic PF00274.19 NODE_48720_length_386_cov_4375.931624_g40840_i0forward_frame_2 - 3.2e-05 22.8 0.2 4e-05 22.5 0.2 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I AJAP1_PANP_C PF15298.6 NODE_48713_length_387_cov_1.761364_g40834_i0reverse_frame_3 - 0.076 13.2 0.4 0.61 10.3 0.2 1.9 1 1 1 2 2 2 0 AJAP1/PANP C-terminus DM PF00751.18 NODE_48711_length_387_cov_1.946023_g40832_i0reverse_frame_3 - 0.22 11.4 6.2 1.4 8.9 0.7 2.6 2 1 0 2 2 2 0 DM DNA binding domain DUF2497 PF10691.9 NODE_48711_length_387_cov_1.946023_g40832_i0reverse_frame_2 - 0.19 12.2 0.0 0.27 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2497) Lipl32 PF12103.8 NODE_48707_length_387_cov_2.369318_g40828_i0reverse_frame_2 - 0.39 10.4 4.0 0.49 10.0 4.0 1.2 1 0 0 1 1 1 0 Surface lipoprotein of Spirochaetales order UQ_con PF00179.26 NODE_48704_length_387_cov_2.477273_g40825_i0reverse_frame_3 - 0.0076 15.9 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme FHA PF00498.26 NODE_48704_length_387_cov_2.477273_g40825_i0forward_frame_3 - 3.5e-06 27.3 0.0 4.1e-05 23.9 0.0 2.0 1 1 1 2 2 2 1 FHA domain MCM_OB PF17207.3 NODE_48703_length_387_cov_2.519886_g40824_i0forward_frame_3 - 0.016 15.1 1.5 0.021 14.7 1.5 1.2 1 0 0 1 1 1 0 MCM OB domain Vanabin-2 PF11437.8 NODE_48703_length_387_cov_2.519886_g40824_i0forward_frame_3 - 0.023 14.9 5.9 0.03 14.5 5.9 1.2 1 0 0 1 1 1 0 Vanadium-binding protein 2 DUF4788 PF16032.5 NODE_48703_length_387_cov_2.519886_g40824_i0forward_frame_3 - 0.05 12.5 0.0 0.054 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4788) DUF5313 PF17240.2 NODE_48701_length_387_cov_2.619318_g40822_i0forward_frame_3 - 7.4 7.0 9.2 12 6.3 6.5 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5313) DUF4118 PF13493.6 NODE_48695_length_387_cov_2.826705_g40816_i0reverse_frame_2 - 1.3 8.9 10.5 0.39 10.5 2.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4118) UPAR_LY6_2 PF16975.5 NODE_48695_length_387_cov_2.826705_g40816_i0forward_frame_3 - 0.012 15.8 2.9 0.017 15.3 2.9 1.3 1 0 0 1 1 1 0 Ly6/PLAUR domain-containing protein 6, Lypd6 preSET_CXC PF18264.1 NODE_48695_length_387_cov_2.826705_g40816_i0forward_frame_2 - 0.95 10.0 6.0 19 5.8 0.1 2.4 2 0 0 2 2 2 0 CXC domain DUF5408 PF17402.2 NODE_48693_length_387_cov_2.889205_g40814_i0reverse_frame_3 - 0.1 12.5 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5408) Angiomotin_C PF12240.8 NODE_48693_length_387_cov_2.889205_g40814_i0forward_frame_3 - 0.0046 16.5 0.2 0.0053 16.3 0.2 1.1 1 0 0 1 1 1 1 Angiomotin C terminal ATG16 PF08614.11 NODE_48693_length_387_cov_2.889205_g40814_i0forward_frame_3 - 0.042 14.1 2.0 0.054 13.7 2.0 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DegS PF05384.11 NODE_48693_length_387_cov_2.889205_g40814_i0forward_frame_3 - 0.053 13.0 0.5 0.076 12.5 0.5 1.2 1 0 0 1 1 1 0 Sensor protein DegS RRM_1 PF00076.22 NODE_48690_length_387_cov_4.406250_g40811_i0forward_frame_2 - 0.0011 18.8 0.3 0.0024 17.6 0.0 1.7 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ORF45 PF17620.2 NODE_48690_length_387_cov_4.406250_g40811_i0forward_frame_2 - 0.027 14.6 0.2 0.034 14.2 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function DUF3653 PF12375.8 NODE_48685_length_387_cov_8.392045_g40806_i0forward_frame_2 - 0.075 13.1 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Phage protein Pox_H7 PF04787.12 NODE_48683_length_387_cov_12.886364_g40804_i0reverse_frame_3 - 0.1 13.1 2.0 0.15 12.6 2.0 1.2 1 0 0 1 1 1 0 Late protein H7 Lipin_mid PF16876.5 NODE_48683_length_387_cov_12.886364_g40804_i0reverse_frame_2 - 0.023 14.8 0.2 0.03 14.5 0.2 1.2 1 0 0 1 1 1 0 Lipin/Ned1/Smp2 multi-domain protein middle domain PSI_PsaJ PF01701.18 NODE_48678_length_387_cov_44.539773_g40799_i0reverse_frame_2 - 2.9 8.5 4.6 0.53 10.9 0.9 1.7 2 0 0 2 2 2 0 Photosystem I reaction centre subunit IX / PsaJ ESF1 PF18209.1 NODE_48677_length_387_cov_49.434659_g40798_i0reverse_frame_3 - 0.16 11.9 3.3 0.34 10.9 3.3 1.5 1 0 0 1 1 1 0 Embryo surrounding factor 1 DUF86 PF01934.17 NODE_48676_length_387_cov_55.076705_g40797_i0reverse_frame_3 - 0.062 13.2 0.1 0.085 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF86 ZZ PF00569.17 NODE_48676_length_387_cov_55.076705_g40797_i0forward_frame_2 - 0.15 11.9 1.1 0.25 11.2 0.2 1.7 2 0 0 2 2 2 0 Zinc finger, ZZ type Nbl1_Borealin_N PF10444.9 NODE_48674_length_387_cov_56.573864_g40795_i0forward_frame_3 - 0.013 15.1 1.4 0.023 14.3 1.4 1.5 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Vir_act_alpha_C PF10400.9 NODE_48674_length_387_cov_56.573864_g40795_i0forward_frame_3 - 0.11 13.2 0.8 0.59 10.8 0.8 2.1 1 1 0 1 1 1 0 Virulence activator alpha C-term C_tripleX PF02363.19 NODE_48671_length_387_cov_67.343750_g40792_i0reverse_frame_2 - 2 8.8 6.9 0.98 9.8 2.5 2.3 2 0 0 2 2 2 0 Cysteine rich repeat VPS9 PF02204.18 NODE_48671_length_387_cov_67.343750_g40792_i0forward_frame_2 - 0.25 11.6 3.7 17 5.7 3.7 2.3 1 1 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain HemY_N PF07219.13 NODE_48669_length_387_cov_70.974432_g40790_i0reverse_frame_3 - 0.11 12.7 2.6 0.19 11.9 2.6 1.3 1 0 0 1 1 1 0 HemY protein N-terminus Babuvirus_MP PF07234.11 NODE_48669_length_387_cov_70.974432_g40790_i0reverse_frame_3 - 0.16 12.1 2.2 0.22 11.7 2.2 1.3 1 0 0 1 1 1 0 Movement and RNA silencing protein SR-25 PF10500.9 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 0.0062 16.2 23.6 0.0088 15.7 23.6 1.2 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein DUF4604 PF15377.6 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 0.64 10.4 21.9 0.84 10.0 21.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) DUF3350 PF11830.8 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 2.4 8.6 8.0 0.21 11.9 2.0 2.2 2 1 1 3 3 3 0 Domain of unknown function (DUF3350) Nucleo_P87 PF07267.11 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 2.7 6.7 7.3 3 6.6 7.3 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 DUF4551 PF15087.6 NODE_48669_length_387_cov_70.974432_g40790_i0forward_frame_2 - 6.8 5.4 10.7 8.1 5.1 10.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) NID PF07292.13 NODE_48666_length_387_cov_74.190341_g40788_i0reverse_frame_3 - 0.13 12.9 0.1 0.32 11.7 0.0 1.6 2 0 0 2 2 2 0 Nmi/IFP 35 domain (NID) Herpes_gI PF01688.17 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_3 - 0.071 13.0 0.2 0.13 12.2 0.2 1.3 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein I PPR_2 PF13041.6 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 1.2e-12 47.8 0.2 9.3e-09 35.4 0.1 3.1 2 1 1 3 3 3 2 PPR repeat family PPR PF01535.20 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 2.6e-12 46.1 0.5 0.00011 22.1 0.0 4.0 4 0 0 4 4 4 3 PPR repeat PPR_3 PF13812.6 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 1.9e-08 34.3 0.1 4.8e-07 29.8 0.0 2.7 2 1 1 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 0.0044 16.7 0.9 0.91 9.3 0.1 3.2 3 1 1 4 4 4 1 PPR repeat PPR_long PF17177.4 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 0.017 14.5 0.0 0.078 12.3 0.0 1.8 1 1 1 2 2 2 0 Pentacotripeptide-repeat region of PRORP TPR_4 PF07721.14 NODE_48658_length_387_cov_80.764205_g40781_i0forward_frame_2 - 0.068 13.8 3.9 0.45 11.3 1.8 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat PDDEXK_4 PF14281.6 NODE_48657_length_387_cov_86.667614_g40780_i0reverse_frame_2 - 0.047 13.8 0.0 0.061 13.5 0.0 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily XRN1_D2_D3 PF18334.1 NODE_48657_length_387_cov_86.667614_g40780_i0forward_frame_3 - 0.0079 16.4 0.4 0.019 15.2 0.2 1.7 1 1 1 2 2 2 1 Exoribonuclease Xrn1 D2/D3 domain TonB_2 PF13103.6 NODE_48655_length_387_cov_123.911932_g40778_i0forward_frame_3 - 0.11 12.8 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 TonB C terminal Ribosomal_S19e PF01090.19 NODE_48652_length_387_cov_150.301136_g40775_i0reverse_frame_2 - 5.1e-34 116.9 0.2 7.3e-34 116.4 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 NODE_48652_length_387_cov_150.301136_g40775_i0reverse_frame_2 - 9.6e-05 22.3 0.2 0.00015 21.7 0.2 1.3 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_27 PF13463.6 NODE_48652_length_387_cov_150.301136_g40775_i0reverse_frame_2 - 0.043 14.3 0.0 0.1 13.1 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF3270 PF11674.8 NODE_48649_length_387_cov_169.187500_g40772_i0reverse_frame_2 - 1.7 8.9 7.8 1.9 8.8 1.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) N-Term_TEN PF11474.8 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 0.0035 17.0 1.9 0.027 14.1 0.2 2.0 2 0 0 2 2 2 1 Telomerase reverse transcriptase TEN domain Crust_neurohorm PF01147.17 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 0.037 13.8 0.9 0.037 13.8 0.9 1.6 2 0 0 2 2 2 0 Crustacean CHH/MIH/GIH neurohormone family AAA_11 PF13086.6 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 0.43 10.3 7.4 0.5 10.1 7.4 1.1 1 0 0 1 1 1 0 AAA domain ALMT PF11744.8 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 0.68 8.7 6.4 0.84 8.4 6.4 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter APG6_N PF17675.1 NODE_48649_length_387_cov_169.187500_g40772_i0forward_frame_3 - 2.2 8.8 14.3 5.6 7.5 14.3 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region Ank_2 PF12796.7 NODE_48647_length_387_cov_225.988636_g40770_i0forward_frame_2 - 2.5e-08 34.4 0.1 7.3e-08 32.9 0.1 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_48647_length_387_cov_225.988636_g40770_i0forward_frame_2 - 1.2e-07 31.8 0.8 0.00028 21.2 0.2 3.2 3 0 0 3 3 3 1 Ankyrin repeat Ank_4 PF13637.6 NODE_48647_length_387_cov_225.988636_g40770_i0forward_frame_2 - 3.4e-07 30.7 0.0 8.2e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_48647_length_387_cov_225.988636_g40770_i0forward_frame_2 - 0.00078 19.7 0.2 0.064 13.8 0.0 3.2 4 0 0 4 4 4 1 Ankyrin repeat Ank_5 PF13857.6 NODE_48647_length_387_cov_225.988636_g40770_i0forward_frame_2 - 0.0014 18.9 0.1 0.014 15.7 0.0 2.2 1 1 1 2 2 2 1 Ankyrin repeats (many copies) ACCA PF03255.14 ORF99758 - 0.0066 16.3 0.2 0.011 15.6 0.2 1.6 1 1 0 1 1 1 1 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF4239 PF14023.6 ORF99758 - 0.11 12.2 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF3328 PF11807.8 ORF99022 - 0.089 12.5 0.2 0.096 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) SAM_2 PF07647.17 ORF98601 - 0.019 15.0 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Gluconate_2-dh3 PF13618.6 ORF98601 - 0.057 13.7 0.1 0.061 13.6 0.1 1.3 1 0 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 DUF2508 PF10704.9 ORF98601 - 0.065 13.4 1.6 0.12 12.6 1.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2508) S-antigen PF05756.11 ORF98601 - 2.2 8.7 7.2 4.2 7.8 7.2 1.7 1 1 0 1 1 1 0 S-antigen protein DNA_pol_phi PF04931.13 ORF98601 - 3.2 5.8 12.2 3.5 5.6 12.2 1.2 1 0 0 1 1 1 0 DNA polymerase phi VKOR PF07884.14 ORF97756 - 0.055 13.6 18.0 0.019 15.2 11.4 2.0 1 1 1 2 2 2 0 Vitamin K epoxide reductase family KOW PF00467.29 ORF97417 - 0.00016 21.5 0.3 0.00041 20.2 0.3 1.6 1 0 0 1 1 1 1 KOW motif Lipoprotein_X PF03305.13 ORF96809 - 0.13 12.0 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Mycoplasma MG185/MG260 protein Staph_opine_DH PF10100.9 ORF96511 - 0.14 10.8 0.0 0.16 10.5 0.0 1.1 1 0 0 1 1 1 0 Staphylopine dehydrogenase RPAP1_N PF08621.10 ORF96511 - 0.34 10.7 2.3 0.39 10.5 0.2 2.0 1 1 1 2 2 2 0 RPAP1-like, N-terminal TSCPD PF12637.7 ORF96415 - 0.062 13.5 3.6 0.091 13.0 3.6 1.2 1 0 0 1 1 1 0 TSCPD domain IncF PF17626.2 ORF96415 - 0.2 12.0 5.3 0.92 9.9 0.2 2.3 1 1 1 2 2 2 0 Inclusion membrane protein F Hepcidin PF06446.12 ORF95737 - 0.005 17.2 3.9 0.33 11.4 0.4 2.3 2 0 0 2 2 2 2 Hepcidin zf-RING_2 PF13639.6 ORF95081 - 9.1e-09 35.5 13.3 9.1e-09 35.5 13.3 1.5 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF95081 - 3.3e-08 33.2 12.7 6e-08 32.4 12.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF95081 - 5.6e-06 26.1 9.9 8.5e-06 25.5 9.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF95081 - 5.8e-06 25.9 8.0 5.8e-06 25.9 8.0 2.5 3 0 0 3 3 3 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF95081 - 2.8e-05 24.1 7.0 2.8e-05 24.1 7.0 2.1 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF95081 - 7.3e-05 22.5 13.8 0.00017 21.4 13.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF95081 - 0.00051 20.3 13.3 0.00071 19.8 11.4 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_6 PF14835.6 ORF95081 - 0.00076 19.3 6.5 0.002 18.0 5.1 2.0 2 0 0 2 2 2 1 zf-RING of BARD1-type protein zf-RING_5 PF14634.6 ORF95081 - 0.0008 19.3 11.8 0.0008 19.3 11.8 2.1 2 0 0 2 2 2 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF95081 - 0.009 15.6 7.4 0.017 14.8 7.4 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF95081 - 0.01 15.7 11.5 0.019 14.8 11.5 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C2HC5 PF06221.13 ORF95081 - 0.011 15.8 3.3 0.011 15.8 3.3 2.2 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type Zf_RING PF16744.5 ORF95081 - 0.05 13.7 5.9 0.11 12.6 5.9 1.6 1 0 0 1 1 1 0 KIAA1045 RING finger Prok-RING_1 PF14446.6 ORF95081 - 0.18 11.7 7.8 0.71 9.8 2.9 2.3 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4_4 PF15227.6 ORF95081 - 0.76 10.0 12.3 3.6 7.8 12.4 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF95081 - 1.7 8.5 10.7 5.2 7.0 10.7 1.8 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain C1_1 PF00130.22 ORF95081 - 2.2 8.3 9.1 5.3 7.0 7.8 2.1 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD PF00628.29 ORF95081 - 7.4 6.5 15.5 5.7 6.9 12.2 2.5 2 1 0 2 2 2 0 PHD-finger Pox_A_type_inc PF04508.12 ORF95081 - 7.6 6.6 8.7 1.2 9.1 0.2 3.5 4 0 0 4 4 4 0 Viral A-type inclusion protein repeat WBP-1 PF11669.8 ORF95077 - 0.041 14.5 0.4 0.062 13.9 0.4 1.4 1 1 0 1 1 1 0 WW domain-binding protein 1 ARPC4 PF05856.12 ORF93902 - 1.2e-40 138.9 0.7 1.3e-40 138.7 0.7 1.0 1 0 0 1 1 1 1 ARP2/3 complex 20 kDa subunit (ARPC4) Harakiri PF15196.6 ORF93856 - 0.0098 16.3 1.6 0.0098 16.3 1.6 2.0 1 1 1 2 2 2 1 Activator of apoptosis harakiri RINGv PF12906.7 ORF92535 - 1.2e-15 57.3 8.4 2e-15 56.6 8.4 1.3 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF92535 - 0.00032 20.8 6.9 0.0005 20.2 5.6 1.9 1 1 1 2 2 2 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF92535 - 0.0014 18.9 8.9 0.0019 18.5 7.8 1.8 1 1 1 2 2 2 1 Ring finger domain DUF587 PF04532.12 ORF92535 - 0.02 14.2 1.0 0.026 13.8 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF587) Ribosomal_L31 PF01197.18 ORF92508 - 4.5e-07 30.0 0.0 7.1e-07 29.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L31 Pkinase PF00069.25 ORF92446 - 2.9e-30 105.5 0.1 3.2e-30 105.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92446 - 3.3e-20 72.5 0.0 3.7e-20 72.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF92446 - 0.0031 16.5 0.1 0.0036 16.3 0.1 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF92446 - 0.0041 16.5 0.0 0.0048 16.3 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF92446 - 0.023 14.0 0.0 0.024 14.0 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Pkinase_fungal PF17667.1 ORF92446 - 0.039 12.7 0.0 0.047 12.5 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase Antimicrobial19 PF08225.11 ORF92446 - 0.37 10.4 0.1 0.37 10.4 0.1 2.1 2 0 0 2 2 2 0 Pseudin antimicrobial peptide Wtap PF17098.5 ORF90710 - 0.026 14.5 0.3 0.033 14.1 0.3 1.2 1 0 0 1 1 1 0 WTAP/Mum2p family DUF3740 PF12548.8 ORF90710 - 0.093 13.2 1.5 0.12 12.8 0.3 1.7 1 1 1 2 2 2 0 Sulfatase protein DUF2239 PF09998.9 ORF88056 - 0.059 13.2 0.0 0.084 12.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) DUF5082 PF16888.5 ORF86959 - 0.0024 18.1 1.5 0.0024 18.1 1.5 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF5082) TACC_C PF05010.14 ORF86959 - 0.0034 17.2 5.1 0.004 17.0 5.1 1.1 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal AphA_like PF14557.6 ORF86959 - 0.0053 16.5 0.5 0.0057 16.4 0.5 1.2 1 0 0 1 1 1 1 Putative AphA-like transcriptional regulator XhlA PF10779.9 ORF86959 - 0.035 14.3 3.3 0.18 12.0 2.4 2.3 2 0 0 2 2 2 0 Haemolysin XhlA DUF2209 PF09974.9 ORF86959 - 0.083 13.2 0.2 0.11 12.9 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2209) RRP36 PF06102.12 ORF86959 - 0.11 12.5 3.7 0.13 12.3 3.7 1.1 1 0 0 1 1 1 0 rRNA biogenesis protein RRP36 RasGAP_C PF03836.15 ORF86959 - 0.23 11.6 3.0 0.38 10.9 0.9 1.9 1 1 1 2 2 2 0 RasGAP C-terminus APG6_N PF17675.1 ORF86959 - 0.52 10.8 11.3 1.3 9.5 11.3 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region UPF0242 PF06785.11 ORF86959 - 0.57 10.3 5.4 0.71 10.0 5.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4140 PF13600.6 ORF86959 - 9.5 6.7 9.8 6.2 7.3 5.9 2.3 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF5539 PF17693.1 ORF86797 - 0.031 13.9 0.6 0.035 13.8 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5539) Birna_VP5 PF03042.14 ORF85490 - 0.0064 16.5 0.7 0.25 11.4 0.2 2.1 1 1 1 2 2 2 2 Birnavirus VP5 protein HECA PF15353.6 ORF85420 - 0.023 15.0 0.6 0.033 14.4 0.6 1.3 1 0 0 1 1 1 0 Headcase protein family homologue US22 PF02393.16 ORF85347 - 0.045 14.0 0.0 0.057 13.7 0.0 1.2 1 0 0 1 1 1 0 US22 like DUF5063 PF16702.5 ORF85188 - 0.0033 17.8 0.1 0.0057 17.1 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5063) Cob_adeno_trans PF01923.18 ORF85188 - 0.009 16.2 0.2 0.01 16.0 0.2 1.1 1 0 0 1 1 1 1 Cobalamin adenosyltransferase OmpH PF03938.14 ORF85188 - 0.057 13.8 4.7 0.091 13.1 4.7 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) BLYB PF05289.11 ORF85188 - 0.11 12.7 13.5 0.14 12.4 12.9 1.5 1 1 0 1 1 1 0 Borrelia hemolysin accessory protein YtxH PF12732.7 ORF85188 - 0.24 11.9 3.8 3.6 8.2 3.8 2.1 1 1 0 1 1 1 0 YtxH-like protein 60KD_IMP PF02096.20 ORF85188 - 0.74 9.7 6.6 0.54 10.1 5.2 1.5 1 1 1 2 2 2 0 60Kd inner membrane protein DUF5305 PF17231.2 ORF85147 - 0.0017 17.8 15.7 0.0018 17.7 15.7 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5305) MID_MedPIWI PF18296.1 ORF85147 - 0.097 12.4 5.2 0.11 12.3 5.2 1.1 1 0 0 1 1 1 0 MID domain of medPIWI Stevor PF17410.2 ORF85147 - 0.18 11.3 6.2 0.23 11.0 6.2 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame RIFIN PF02009.16 ORF85147 - 0.24 11.2 9.6 0.33 10.8 9.6 1.4 1 0 0 1 1 1 0 Rifin DUF5383 PF17355.2 ORF85147 - 0.52 10.7 5.1 1 9.8 4.3 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5383) SOG2 PF10428.9 ORF85147 - 1.4 8.1 15.5 1.4 8.0 15.5 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein DUF908 PF06012.12 ORF85147 - 6.7 6.0 12.6 7 6.0 12.6 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) TFIIA_gamma_C PF02751.14 ORF84406 - 0.0076 16.4 0.2 0.017 15.3 0.2 1.6 1 0 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit O-antigen_lig PF13425.6 ORF83960 - 0.098 11.4 8.0 0.11 11.3 8.0 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein L_HMGIC_fpl PF10242.9 ORF83958 - 0.063 13.5 3.8 0.038 14.2 2.2 1.5 1 1 1 2 2 2 0 Lipoma HMGIC fusion partner-like protein NPP PF08384.10 ORF8386 - 0.0072 16.4 0.0 0.021 14.8 0.0 1.8 1 0 0 1 1 1 1 Pro-opiomelanocortin, N-terminal region ABC2_membrane_3 PF12698.7 ORF810 - 1.7 7.7 14.8 2.2 7.3 14.8 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4131 PF13567.6 ORF810 - 1.9 8.1 5.7 2.6 7.6 5.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) SH2 PF00017.24 ORF80605 - 0.049 13.7 0.1 0.081 13.0 0.1 1.3 1 0 0 1 1 1 0 SH2 domain Sex_peptide PF08138.11 ORF79893 - 0.096 12.8 1.8 1.4 9.1 0.1 2.5 2 0 0 2 2 2 0 Sex peptide (SP) family DUF3341 PF11821.8 ORF79893 - 0.22 11.2 0.0 0.36 10.5 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3341) DUF902 PF06001.13 ORF79289 - 0.068 13.7 0.9 0.11 12.9 0.9 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF902) Cytochrom_C PF00034.21 ORF79006 - 0.5 11.5 2.5 24 6.2 0.1 2.2 2 0 0 2 2 2 0 Cytochrome c DUF3262 PF11660.8 ORF75644 - 0.028 14.8 1.6 0.028 14.8 1.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3262) ABC2_membrane_3 PF12698.7 ORF75601 - 1.7 7.7 14.8 2.2 7.3 14.8 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4131 PF13567.6 ORF75601 - 1.9 8.1 5.7 2.6 7.6 5.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF808 PF05661.12 ORF75522 - 0.21 10.6 0.1 0.26 10.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF808) Homeobox_KN PF05920.11 ORF75450 - 1.5e-12 47.2 0.8 2.4e-12 46.5 0.8 1.3 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF75450 - 1.9e-06 27.6 0.5 3.4e-06 26.8 0.5 1.4 1 0 0 1 1 1 1 Homeodomain DUF1096 PF06493.11 ORF7439 - 0.036 14.5 5.6 0.036 14.5 5.6 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1096) LAP2alpha PF11560.8 ORF74331 - 0.012 15.0 0.2 0.018 14.5 0.2 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 2 alpha CP12 PF02672.15 ORF73776 - 0.083 13.7 1.5 0.083 13.7 1.5 1.9 2 0 0 2 2 2 0 CP12 domain BTG PF07742.12 ORF72840 - 0.017 14.9 0.0 0.022 14.6 0.0 1.2 1 0 0 1 1 1 0 BTG family RIIa PF02197.17 ORF72551 - 0.0056 16.3 0.3 0.02 14.6 0.0 2.0 2 0 0 2 2 2 1 Regulatory subunit of type II PKA R-subunit zf-MYND PF01753.18 ORF71015 - 0.00021 21.3 15.4 0.00047 20.2 15.4 1.6 1 0 0 1 1 1 1 MYND finger Prefoldin_2 PF01920.20 ORF70804 - 1.5e-11 44.2 13.2 1.8e-11 43.9 13.2 1.1 1 0 0 1 1 1 1 Prefoldin subunit Dynamin_M PF01031.20 ORF70804 - 0.0012 18.2 1.9 0.0029 16.9 2.0 1.5 1 1 0 1 1 1 1 Dynamin central region DUF3958 PF13125.6 ORF70804 - 0.0035 17.5 7.4 0.0048 17.1 7.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3958) FTA4 PF13093.6 ORF70804 - 0.0059 16.5 4.0 0.0075 16.2 4.0 1.2 1 0 0 1 1 1 1 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 BLOC1_2 PF10046.9 ORF70804 - 0.019 15.2 8.2 0.15 12.4 1.0 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Spectrin PF00435.21 ORF70804 - 0.049 14.1 9.1 0.23 12.0 0.4 2.1 2 0 0 2 2 2 0 Spectrin repeat Fib_alpha PF08702.10 ORF70804 - 0.71 10.1 5.4 1 9.6 5.4 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family FliD_N PF02465.18 ORF70804 - 0.83 10.4 5.0 3 8.6 0.4 2.2 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Thioesterase PF00975.20 ORF70804 - 1.6 8.8 3.8 4.1 7.4 3.0 1.7 1 1 1 2 2 2 0 Thioesterase domain TMPIT PF07851.13 ORF70804 - 1.8 7.8 5.1 2.4 7.3 5.1 1.2 1 0 0 1 1 1 0 TMPIT-like protein Phage_lysis PF03245.13 ORF70804 - 2.4 8.3 7.1 16 5.7 0.1 2.1 2 0 0 2 2 2 0 Bacteriophage Rz lysis protein Ribosomal_L14 PF00238.19 ORF70303 - 2.7e-11 43.6 0.0 3.2e-11 43.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e BCL9 PF11502.8 ORF68132 - 0.11 12.3 0.0 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 B-cell lymphoma 9 protein Rep_fac_C PF08542.11 ORF6795 - 7.6e-14 51.9 0.3 1.1e-13 51.4 0.3 1.2 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA_assoc_2 PF16193.5 ORF6795 - 0.00059 20.1 0.0 0.0012 19.2 0.0 1.7 1 1 0 1 1 1 1 AAA C-terminal domain Ribosomal_S20p PF01649.18 ORF6795 - 0.13 12.9 0.4 0.24 12.1 0.4 1.3 1 0 0 1 1 1 0 Ribosomal protein S20 zf-C3HC4_3 PF13920.6 ORF67484 - 1.9 8.4 4.9 8.9 6.3 0.1 2.6 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) EF-hand_1 PF00036.32 ORF67250 - 3.1e-21 73.3 10.6 6e-07 28.6 1.5 3.2 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF67250 - 7.8e-20 70.5 7.2 5.4e-07 29.4 0.0 3.2 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_7 PF13499.6 ORF67250 - 1.7e-17 63.6 3.4 1.2e-10 41.7 2.5 2.3 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF67250 - 1e-15 56.3 7.0 2.9e-06 26.8 1.3 3.3 3 0 0 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 ORF67250 - 3.5e-15 54.7 11.1 2.5e-06 26.7 2.1 3.3 3 0 0 3 3 3 3 EF hand Caleosin PF05042.13 ORF67250 - 7e-06 26.1 4.0 0.1 12.5 0.4 3.0 1 1 2 3 3 3 2 Caleosin related protein SPARC_Ca_bdg PF10591.9 ORF67250 - 0.00013 22.2 0.3 0.00099 19.4 0.3 2.0 1 1 1 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF67250 - 0.00024 21.0 3.8 1.3 9.0 0.1 3.0 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 ORF67250 - 0.0024 18.0 2.0 0.72 10.1 0.0 2.8 2 1 1 3 3 3 2 Dockerin type I domain EF-hand_9 PF14658.6 ORF67250 - 0.0053 17.1 0.1 0.018 15.4 0.1 1.8 2 0 0 2 2 2 1 EF-hand domain EF-hand_11 PF08976.11 ORF67250 - 0.02 15.8 0.1 0.025 15.4 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain EF-hand_13 PF17958.1 ORF67250 - 0.025 14.3 0.0 0.11 12.4 0.0 2.0 2 1 1 3 3 3 0 EF-hand domain Herpes_UL36 PF03586.13 ORF67250 - 0.055 12.8 0.2 0.85 8.9 0.1 2.2 1 1 1 2 2 2 0 Herpesvirus UL36 tegument protein tRNA_synt_1c_R1 PF04558.15 ORF67250 - 0.066 13.2 0.1 0.11 12.5 0.1 1.4 1 1 1 2 2 2 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 Pkinase PF00069.25 ORF66715 - 0.00016 21.1 1.8 0.00021 20.7 0.2 1.8 2 0 0 2 2 2 1 Protein kinase domain FTA2 PF13095.6 ORF66715 - 0.1 12.2 0.2 0.43 10.2 0.2 2.0 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Tctex-1 PF03645.13 ORF65317 - 3.4e-24 85.1 1.1 3.9e-24 84.9 1.1 1.1 1 0 0 1 1 1 1 Tctex-1 family PSCyt2 PF07583.11 ORF65317 - 0.035 14.0 0.1 0.045 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1549) GvpO PF05800.11 ORF65317 - 0.044 13.8 0.1 0.063 13.3 0.1 1.2 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpO # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks204.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks204.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks204.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks204.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ERM PF00769.19 ORF63603 - 0.00055 19.8 0.9 0.00063 19.6 0.9 1.1 1 0 0 1 1 1 1 Ezrin/radixin/moesin family DUF2205 PF10224.9 ORF63603 - 0.013 15.5 5.7 0.02 14.9 5.7 1.3 1 0 0 1 1 1 0 Short coiled-coil protein TPD52 PF04201.15 ORF63603 - 1.8 8.1 7.5 10 5.7 7.5 1.9 1 1 0 1 1 1 0 Tumour protein D52 family Ank_5 PF13857.6 ORF62987 - 2.2e-19 69.2 5.7 2.9e-09 37.0 0.3 2.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF62987 - 1.8e-17 63.7 0.0 3.4e-12 46.8 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF62987 - 1.1e-16 60.9 1.8 3.6e-12 46.6 0.1 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF62987 - 3.1e-14 51.7 1.2 0.0022 18.3 0.1 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF62987 - 1.7e-11 44.0 3.2 0.0031 17.9 0.4 3.4 3 0 0 3 3 3 3 Ankyrin repeat DHHC PF01529.20 ORF6134 - 7.5e-13 48.7 10.7 1.1e-12 48.2 7.4 2.0 2 0 0 2 2 2 1 DHHC palmitoyltransferase DUF4551 PF15087.6 ORF60779 - 0.17 10.7 0.2 0.21 10.4 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) DUF3464 PF11947.8 ORF60779 - 2.3 8.0 4.1 8.4 6.1 0.3 2.2 2 0 0 2 2 2 0 Photosynthesis affected mutant 68 ABC2_membrane_3 PF12698.7 ORF60308 - 1.7 7.7 14.8 2.2 7.3 14.8 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4131 PF13567.6 ORF60308 - 1.9 8.1 5.7 2.6 7.6 5.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) PP-binding PF00550.25 ORF56984 - 1.1e-05 25.6 0.0 1.5e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site PP-binding_2 PF14573.6 ORF56984 - 0.0071 16.6 0.1 0.0086 16.3 0.1 1.2 1 0 0 1 1 1 1 Acyl-carrier Rad60-SLD PF11976.8 ORF56984 - 0.087 12.7 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like NifU_N PF01592.16 ORF56315 - 5.9e-58 194.6 0.2 6.4e-58 194.5 0.2 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain Herpes_DNAp_acc PF04929.12 ORF56272 - 1.1 8.1 3.6 1.3 7.9 3.6 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor FANCI_S4 PF14678.6 ORF55833 - 0.028 13.6 0.4 0.031 13.4 0.4 1.0 1 0 0 1 1 1 0 FANCI solenoid 4 Chordopox_L2 PF05803.12 ORF55833 - 0.083 12.7 1.1 0.15 11.9 1.0 1.5 1 1 0 1 1 1 0 Chordopoxvirus L2 protein Ank_5 PF13857.6 ORF55745 - 2.2e-19 69.2 5.7 2.9e-09 37.0 0.3 2.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF55745 - 1.8e-17 63.7 0.0 3.4e-12 46.8 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF55745 - 1.1e-16 60.9 1.8 3.6e-12 46.6 0.1 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF55745 - 3.1e-14 51.7 1.2 0.0022 18.3 0.1 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 ORF55745 - 1.7e-11 44.0 3.2 0.0031 17.9 0.4 3.4 3 0 0 3 3 3 3 Ankyrin repeat MyTH4 PF00784.17 ORF54769 - 0.56 10.7 8.1 0.91 10.0 0.1 2.4 2 1 1 3 3 3 0 MyTH4 domain CCDC158 PF15921.5 ORF5469 - 4.1 5.1 5.0 4.3 5.0 5.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 158 Pan_kinase PF03309.14 ORF53192 - 0.2 11.4 0.0 0.25 11.1 0.0 1.1 1 0 0 1 1 1 0 Type III pantothenate kinase Transcript_VP30 PF11507.8 ORF52655 - 0.17 11.9 0.0 0.28 11.2 0.0 1.3 1 0 0 1 1 1 0 Ebola virus-specific transcription factor VP30 Glyco_hydro_59 PF02057.15 ORF52598 - 0.00037 19.8 0.1 0.00039 19.7 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 59 CK_II_beta PF01214.18 ORF52598 - 1.5 8.6 7.7 1.9 8.3 6.6 1.6 1 1 1 2 2 2 0 Casein kinase II regulatory subunit Ac110_PIF PF07280.11 ORF52179 - 0.13 12.0 2.0 0.27 11.0 2.0 1.5 1 0 0 1 1 1 0 Per os infectivity factor AC110 TTL PF03133.15 ORF51299 - 0.00021 20.5 0.2 0.00025 20.3 0.2 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Ribosomal_S30AE PF02482.19 ORF51299 - 0.025 15.3 0.0 0.034 14.9 0.0 1.3 1 0 0 1 1 1 0 Sigma 54 modulation protein / S30EA ribosomal protein TRAF6_Z2 PF18048.1 ORF50062 - 0.026 14.6 1.5 0.051 13.7 0.2 2.1 2 1 0 2 2 2 0 TNF receptor-associated factor 6 zinc finger 2 zf-TRAF PF02176.18 ORF50062 - 0.027 15.1 2.1 0.027 15.1 2.1 1.9 2 0 0 2 2 2 0 TRAF-type zinc finger AMP-binding_C PF13193.6 ORF4918 - 6.1e-08 33.5 0.0 9.6e-08 32.9 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain CCDC158 PF15921.5 ORF48870 - 4.1 5.1 5.0 4.3 5.0 5.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 158 DUF5447 PF17525.2 ORF47824 - 0.72 10.4 5.1 0.25 11.8 2.4 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5447) UPAR_LY6 PF00021.21 ORF46834 - 0.033 14.9 7.2 0.065 14.0 7.2 1.6 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Fer2_2 PF01799.20 ORF46116 - 0.76 9.8 6.4 0.42 10.7 2.2 2.1 2 0 0 2 2 2 0 [2Fe-2S] binding domain DUF2719 PF10891.8 ORF45151 - 0.17 11.8 1.4 0.25 11.3 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2719) Ferlin_C PF16165.5 ORF45020 - 0.00013 21.9 0.0 0.00015 21.8 0.0 1.1 1 0 0 1 1 1 1 Ferlin C-terminus ABC2_membrane_3 PF12698.7 ORF44980 - 1.7 7.7 14.8 2.2 7.3 14.8 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4131 PF13567.6 ORF44980 - 1.9 8.1 5.7 2.6 7.6 5.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF4656 PF15551.6 ORF44779 - 0.82 9.1 6.6 0.94 8.9 6.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) Arrestin_N PF00339.29 ORF4433 - 0.0013 18.9 0.1 0.0016 18.5 0.1 1.3 1 1 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain TPT PF03151.16 ORF44092 - 4.2e-26 92.0 2.4 5.1e-26 91.7 2.4 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF44092 - 0.011 15.9 6.4 0.013 15.7 6.4 1.2 1 0 0 1 1 1 0 EamA-like transporter family SipA_VBS PF17985.1 ORF4350 - 0.099 12.6 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 SipA vinculin binding site ABC2_membrane_3 PF12698.7 ORF43446 - 1.7 7.7 14.8 2.2 7.3 14.8 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4131 PF13567.6 ORF43446 - 1.9 8.1 5.7 2.6 7.6 5.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) MerR PF00376.23 ORF4145 - 0.03 14.1 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 MerR family regulatory protein DUF5082 PF16888.5 ORF4145 - 0.096 13.0 4.0 0.085 13.1 3.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) BRD4_CDT PF17105.5 ORF39716 - 0.0035 16.9 2.4 0.0069 16.0 2.4 1.5 1 0 0 1 1 1 1 C-terminal domain of bromodomain protein 4 DivIVA PF05103.13 ORF39716 - 0.25 11.5 7.6 0.39 10.8 7.6 1.4 1 1 0 1 1 1 0 DivIVA protein QRPTase_C PF01729.19 ORF39451 - 3e-33 115.0 0.0 3.3e-33 114.8 0.0 1.0 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain DUF1554 PF07588.11 ORF3820 - 0.033 14.0 0.1 0.052 13.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1554) Oxidored_q6 PF01058.22 ORF37274 - 1.6e-18 66.8 0.0 1.7e-18 66.7 0.0 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DHHC PF01529.20 ORF37238 - 2e-27 95.9 15.3 2.2e-27 95.8 15.3 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase VKG_Carbox PF05090.14 ORF37238 - 0.025 13.4 1.3 0.033 13.0 1.3 1.2 1 0 0 1 1 1 0 Vitamin K-dependent gamma-carboxylase PhrC_PhrF PF11131.8 ORF37238 - 0.13 11.8 0.0 0.13 11.8 0.0 1.6 2 0 0 2 2 2 0 Rap-phr extracellular signalling zf-C4_ClpX PF06689.13 ORF37238 - 2 8.4 10.3 0.56 10.1 1.2 2.7 1 1 1 2 2 2 0 ClpX C4-type zinc finger Lipoprotein_X PF03305.13 ORF37225 - 0.13 12.0 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Mycoplasma MG185/MG260 protein PALP PF00291.25 ORF36500 - 0.0042 16.5 0.0 0.0054 16.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF2207 PF09972.9 ORF35978 - 0.47 9.2 2.8 0.55 8.9 2.6 1.2 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3918 PF13056.6 ORF35693 - 0.012 15.2 0.1 0.02 14.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) Spore_III_AB PF09548.10 ORF32524 - 0.054 13.6 0.4 0.071 13.2 0.4 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) UPF0552 PF10574.9 ORF32347 - 0.012 14.9 0.8 0.014 14.7 0.8 1.2 1 0 0 1 1 1 0 Arp2/3-interacting proteins Arpin DUF2357 PF09823.9 ORF32347 - 0.018 14.3 3.8 0.022 14.0 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2357) Peptidase_S49_N PF08496.10 ORF32347 - 0.12 12.5 5.0 0.13 12.3 5.0 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal CHASE6_C PF17150.4 ORF32347 - 0.14 12.8 2.7 0.17 12.5 1.5 1.9 1 1 1 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain CLN3 PF02487.17 ORF32347 - 0.5 9.4 2.5 0.59 9.1 2.5 1.0 1 0 0 1 1 1 0 CLN3 protein Amidinotransf PF02274.17 ORF32096 - 1.1e-32 113.5 1.8 1.2e-32 113.4 1.8 1.0 1 0 0 1 1 1 1 Amidinotransferase DUF1349 PF07081.11 ORF31858 - 0.16 11.7 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1349) UQ_con PF00179.26 ORF31371 - 7.7e-30 103.4 0.0 8.9e-30 103.2 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF1409 PF07197.12 ORF30753 - 0.11 12.4 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1409) Dexa_ind PF15198.6 ORF30392 - 0.045 13.9 3.1 0.073 13.2 3.1 1.4 1 0 0 1 1 1 0 Dexamethasone-induced DUF3576 PF12100.8 ORF27132 - 0.17 12.0 3.2 4.3 7.5 0.9 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3576) Abhydrolase_9_N PF15420.6 ORF23717 - 0.00036 20.6 0.2 0.00044 20.3 0.2 1.1 1 0 0 1 1 1 1 Alpha/beta-hydrolase family N-terminus DUF4013 PF13197.6 ORF23717 - 0.052 13.4 7.8 0.073 12.9 7.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) DUF2207 PF09972.9 ORF23717 - 0.13 11.0 1.1 0.17 10.6 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DHHC PF01529.20 ORF23717 - 1.5 8.9 5.0 2 8.5 5.0 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase HemY_N PF07219.13 ORF23717 - 5.9 7.1 9.6 19 5.5 5.6 2.1 2 0 0 2 2 2 0 HemY protein N-terminus zinc_ribbon_12 PF11331.8 ORF22797 - 0.028 14.2 0.2 0.63 9.9 0.1 2.5 2 0 0 2 2 2 0 Probable zinc-ribbon domain Rtt106_N PF18215.1 ORF19333 - 0.12 12.2 0.4 0.28 11.0 0.4 1.6 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain TMEM138 PF14935.6 ORF1861 - 0.49 11.1 6.1 5.7 7.6 1.8 2.1 1 1 1 2 2 2 0 Transmembrane protein 138 DUF446 PF04287.12 ORF17202 - 0.11 12.6 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 tRNA pseudouridine synthase C ETM PF17577.2 ORF16919 - 0.082 13.5 2.7 0.11 13.1 2.7 1.3 1 0 0 1 1 1 0 ECORI-T site Prefoldin PF02996.17 ORF16911 - 2.3e-16 59.8 6.0 2.8e-16 59.5 6.0 1.1 1 0 0 1 1 1 1 Prefoldin subunit ASPRs PF17641.2 ORF16911 - 0.042 14.1 2.7 0.14 12.5 0.1 2.2 1 1 1 2 2 2 0 Ancylostoma-associated secreted protein related MTS PF05175.14 ORF16911 - 0.072 12.6 0.1 0.12 12.0 0.1 1.4 1 1 0 1 1 1 0 Methyltransferase small domain Prefoldin_2 PF01920.20 ORF16911 - 0.19 11.7 10.0 1.9 8.5 10.0 2.2 1 1 0 1 1 1 0 Prefoldin subunit FlxA PF14282.6 ORF16911 - 0.92 9.5 9.3 0.64 10.0 2.9 2.1 2 0 0 2 2 2 0 FlxA-like protein DUF4709 PF15821.5 ORF15895 - 0.011 16.0 1.7 0.011 16.0 1.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4709) CcdA PF07362.12 ORF15895 - 0.15 12.5 2.3 0.36 11.3 1.3 1.9 2 0 0 2 2 2 0 Post-segregation antitoxin CcdA Ank_2 PF12796.7 ORF15569 - 2.6e-13 50.4 0.0 4.3e-13 49.7 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF15569 - 9.7e-12 45.2 0.0 2e-08 34.6 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF15569 - 9.5e-11 41.0 0.0 6.8e-05 23.0 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 ORF15569 - 2.8e-09 37.0 0.1 0.0033 17.8 0.0 3.0 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF15569 - 6.9e-09 35.8 0.0 5.6e-05 23.3 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) CCDC158 PF15921.5 ORF150497 - 4.1 5.1 5.0 4.3 5.0 5.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 158 EndIII_4Fe-2S PF10576.9 ORF150322 - 5.7 7.4 10.6 5.6 7.4 0.5 3.0 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III Glyco_transf_22 PF03901.17 ORF14798 - 3.7e-08 33.0 7.4 4e-08 32.9 7.4 1.0 1 0 0 1 1 1 1 Alg9-like mannosyltransferase family GRDP-like PF07173.12 ORF147909 - 1.1 10.0 6.0 4.7 7.9 0.1 2.2 1 1 1 2 2 2 0 Glycine-rich domain-containing protein-like Ribosomal_L14 PF00238.19 ORF147875 - 2.7e-11 43.6 0.0 3.2e-11 43.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e OAF PF14941.6 ORF147671 - 0.032 13.7 0.1 0.035 13.6 0.1 1.1 1 0 0 1 1 1 0 Transcriptional regulator, Out at first SBF PF01758.16 ORF147574 - 0.053 13.2 0.7 0.053 13.2 0.7 1.4 2 0 0 2 2 2 0 Sodium Bile acid symporter family TraB PF01963.17 ORF147570 - 8.5e-09 35.7 0.1 1.1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 TraB family Cofac_haem_bdg PF04187.13 ORF147570 - 0.00073 19.6 0.1 0.00083 19.4 0.1 1.1 1 0 0 1 1 1 1 Haem-binding uptake, Tiki superfamily, ChaN Erythro_esteras PF05139.14 ORF147570 - 0.025 14.4 0.0 0.026 14.3 0.0 1.1 1 0 0 1 1 1 0 Erythromycin esterase TetR_C_16 PF17920.1 ORF147570 - 0.048 13.9 2.4 0.088 13.1 0.6 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Spike_torovirin PF17072.5 ORF14666 - 0.031 11.4 2.8 0.035 11.3 2.8 1.0 1 0 0 1 1 1 0 Torovirinae spike glycoprotein ZYG-11_interact PF05884.12 ORF145797 - 0.056 12.9 0.1 0.07 12.5 0.1 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 ArsP_1 PF03773.13 ORF145137 - 0.22 10.6 0.0 0.29 10.2 0.0 1.1 1 0 0 1 1 1 0 Predicted permease NfeD PF01957.18 ORF145111 - 1.5e-17 63.7 0.1 1.5e-17 63.7 0.1 1.6 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding DUF4131 PF13567.6 ORF145111 - 0.00092 18.9 0.7 0.0012 18.6 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) MFS_1 PF07690.16 ORF145111 - 0.0025 16.8 1.4 0.0028 16.6 1.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Phage_holin_3_6 PF07332.11 ORF145111 - 0.0048 16.9 1.3 0.0061 16.6 1.3 1.1 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III UbiA PF01040.18 ORF145111 - 0.0065 15.8 2.2 0.0086 15.4 2.2 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family ABC_membrane PF00664.23 ORF145111 - 0.031 13.9 0.0 0.039 13.6 0.0 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region RseC_MucC PF04246.12 ORF145111 - 0.091 12.7 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Peptidase_U4 PF03419.13 ORF145111 - 0.16 11.3 0.2 0.19 11.0 0.2 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA DUF3093 PF11292.8 ORF145111 - 0.4 10.9 6.2 0.68 10.2 6.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3093) Penicil_amidase PF01804.18 ORF144490 - 1.6e-06 27.4 0.0 1.7e-06 27.3 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase DUF4360 PF14273.6 ORF144490 - 0.077 12.9 0.0 0.095 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4360) NINJA_B PF16136.5 ORF144239 - 0.0045 17.4 5.7 0.0055 17.1 5.7 1.3 1 0 0 1 1 1 1 Putative nuclear localisation signal Sin_N PF04801.13 ORF144239 - 0.037 13.3 6.6 0.039 13.2 6.6 1.1 1 0 0 1 1 1 0 Sin-like protein conserved region Connexin PF00029.19 ORF144239 - 0.038 13.8 2.7 0.045 13.5 2.7 1.1 1 0 0 1 1 1 0 Connexin Pox_Ag35 PF03286.14 ORF144239 - 0.092 12.5 7.4 0.12 12.2 7.4 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Pannexin_like PF12534.8 ORF144239 - 0.18 10.9 0.7 0.2 10.7 0.7 1.0 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 DUF2828 PF11443.8 ORF144239 - 0.29 9.2 4.4 0.29 9.2 4.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) CDC45 PF02724.14 ORF144239 - 0.37 9.0 9.2 0.34 9.2 9.2 1.0 1 0 0 1 1 1 0 CDC45-like protein Presenilin PF01080.17 ORF144239 - 2.1 7.0 5.6 2.2 7.0 5.6 1.1 1 0 0 1 1 1 0 Presenilin RNA_pol_Rpc4 PF05132.14 ORF144239 - 6.8 7.1 8.1 9.5 6.6 8.1 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 PTS_EIIB PF00367.20 ORF142655 - 0.077 12.5 0.2 0.15 11.6 0.2 1.4 1 0 0 1 1 1 0 phosphotransferase system, EIIB TAXi_C PF14541.6 ORF142456 - 4e-06 26.7 0.0 6.5e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF142456 - 0.011 15.1 0.1 0.015 14.7 0.1 1.2 1 0 0 1 1 1 0 Eukaryotic aspartyl protease VASt PF16016.5 ORF142456 - 0.1 13.0 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain DUF1272 PF06906.11 ORF142220 - 0.87 9.7 5.8 0.16 12.0 1.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Tox-HDC PF15656.6 ORF141249 - 0.37 11.0 3.6 0.5 10.6 0.7 2.0 1 1 1 2 2 2 0 Toxin with a H, D/N and C signature Ank PF00023.30 ORF140903 - 1.1e-14 54.1 0.2 1.3e-06 28.6 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF140903 - 3.2e-13 50.1 0.0 4.9e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF140903 - 1.2e-12 47.8 0.2 9.7e-08 32.1 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF140903 - 5.5e-12 46.0 0.0 8.9e-12 45.3 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF140903 - 1.4e-10 40.4 0.1 2.2e-05 24.5 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat Mannosyl_trans PF05007.13 ORF140801 - 0.00017 21.6 1.0 0.00024 21.1 1.0 1.3 1 0 0 1 1 1 1 Mannosyltransferase (PIG-M) Med3 PF11593.8 ORF13988 - 0.13 11.4 0.1 0.14 11.3 0.1 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal MPS-4 PF17523.2 ORF1396 - 0.6 10.3 3.3 0.26 11.4 0.6 2.0 2 1 0 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 60KD_IMP PF02096.20 ORF137887 - 0.019 14.8 0.0 0.024 14.5 0.0 1.0 1 0 0 1 1 1 0 60Kd inner membrane protein DUF1708 PF08101.11 ORF135907 - 0.00017 20.9 0.0 0.00022 20.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1708) zf-like PF04071.12 ORF135452 - 0.028 14.3 2.6 0.048 13.6 2.6 1.4 1 0 0 1 1 1 0 Cysteine-rich small domain zf-SNAP50_C PF12251.8 ORF133871 - 0.027 14.1 0.0 0.039 13.6 0.0 1.2 1 0 0 1 1 1 0 snRNA-activating protein of 50kDa MW C terminal DUF4551 PF15087.6 ORF132806 - 0.17 10.7 0.2 0.21 10.4 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) DUF3464 PF11947.8 ORF132806 - 2.3 8.0 4.1 8.4 6.1 0.3 2.2 2 0 0 2 2 2 0 Photosynthesis affected mutant 68 Ureide_permease PF07168.11 ORF1317 - 3.6e-08 32.6 1.6 4.3e-08 32.3 1.6 1.1 1 0 0 1 1 1 1 Ureide permease Ribosomal_L14 PF00238.19 ORF131148 - 2.7e-11 43.6 0.0 3.2e-11 43.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e VASt PF16016.5 ORF130830 - 0.063 13.7 0.4 0.087 13.2 0.4 1.3 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain Ribosomal_L14e PF01929.17 ORF130324 - 8.8e-26 90.2 1.0 1.1e-25 89.9 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L14 Fer2_2 PF01799.20 ORF130121 - 0.76 9.8 6.4 0.42 10.7 2.2 2.1 2 0 0 2 2 2 0 [2Fe-2S] binding domain DUF3398 PF11878.8 ORF130012 - 5.3e-05 23.6 0.7 7.3e-05 23.2 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3398) Pkinase PF00069.25 ORF129032 - 0.00016 21.1 1.8 0.00021 20.7 0.2 1.8 2 0 0 2 2 2 1 Protein kinase domain FTA2 PF13095.6 ORF129032 - 0.1 12.2 0.2 0.43 10.2 0.2 2.0 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 IQCJ-SCHIP1 PF15157.6 ORF128839 - 5.6 6.8 8.0 1.3 8.8 4.8 1.7 1 1 1 2 2 2 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif DUF5641 PF18701.1 ORF127802 - 0.12 12.5 1.0 0.25 11.5 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5641) NUDIX_4 PF14815.6 ORF127671 - 0.12 12.4 1.4 0.2 11.7 1.2 1.6 1 1 0 1 1 1 0 NUDIX domain DUF1556 PF07590.11 ORF125817 - 0.52 10.7 6.1 4.8 7.6 3.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1556) Ribosomal_L14e PF01929.17 ORF125323 - 8.8e-26 90.2 1.0 1.1e-25 89.9 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L14 Ribosomal_L14e PF01929.17 ORF12268 - 8.8e-26 90.2 1.0 1.1e-25 89.9 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L14 HECA PF15353.6 ORF121337 - 0.023 15.0 0.6 0.033 14.4 0.6 1.3 1 0 0 1 1 1 0 Headcase protein family homologue TMEM61 PF15105.6 ORF119840 - 0.002 18.0 0.7 0.0025 17.7 0.7 1.3 1 0 0 1 1 1 1 TMEM61 protein family Corona_NS3b PF03053.14 ORF11757 - 0.1 12.4 1.2 0.13 12.0 1.2 1.2 1 0 0 1 1 1 0 ORF3b coronavirus protein Pex24p PF06398.11 ORF116622 - 0.1 11.6 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin UL17 PF17640.2 ORF116513 - 0.07 13.1 1.2 0.078 13.0 0.2 1.6 2 0 0 2 2 2 0 Uncharacterized UL17 Spore_III_AB PF09548.10 ORF115899 - 0.054 13.6 0.4 0.071 13.2 0.4 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) Ins145_P3_rec PF08709.11 ORF115833 - 3e-15 56.0 0.2 3.7e-15 55.7 0.2 1.1 1 0 0 1 1 1 1 Inositol 1,4,5-trisphosphate/ryanodine receptor Spore_III_AB PF09548.10 ORF115165 - 0.054 13.6 0.4 0.071 13.2 0.4 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) DUF4618 PF15397.6 ORF114926 - 0.08 12.4 5.4 0.096 12.1 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Glyco_trans_1_2 PF13524.6 ORF114926 - 0.2 12.1 5.5 6.1 7.3 1.6 2.2 2 0 0 2 2 2 0 Glycosyl transferases group 1 OmpH PF03938.14 ORF114926 - 0.7 10.2 8.5 0.86 9.9 8.5 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) APG6_N PF17675.1 ORF114926 - 0.76 10.3 15.0 1.1 9.8 15.0 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region GBP_C PF02841.14 ORF114926 - 2.3 7.5 13.4 2.9 7.2 13.4 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain ADIP PF11559.8 ORF114926 - 6.1 6.9 14.8 16 5.6 11.0 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding PP-binding PF00550.25 ORF114008 - 2.9e-08 33.9 0.0 4.1e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site Isochorismatase PF00857.20 ORF114008 - 1.1e-05 25.7 0.1 1.5e-05 25.3 0.1 1.2 1 0 0 1 1 1 1 Isochorismatase family DM PF00751.18 ORF113666 - 0.08 12.9 4.3 0.17 11.8 4.3 1.6 1 1 0 1 1 1 0 DM DNA binding domain PIG-Y PF15159.6 ORF111559 - 2.9e-11 44.1 4.9 4e-11 43.7 4.9 1.2 1 0 0 1 1 1 1 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y Sec20 PF03908.13 ORF111559 - 0.025 14.5 2.4 0.06 13.3 2.4 1.6 1 1 0 1 1 1 0 Sec20 UQ_con PF00179.26 ORF111322 - 4.6e-39 133.3 0.1 5.2e-39 133.1 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF111322 - 0.0072 16.6 0.0 0.011 16.0 0.0 1.3 1 1 0 1 1 1 1 RWD domain RIFIN PF02009.16 ORF111322 - 0.063 13.2 0.1 0.076 12.9 0.1 1.1 1 0 0 1 1 1 0 Rifin SRI PF08236.11 ORF111322 - 0.13 12.4 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 SRI (Set2 Rpb1 interacting) domain CnrY PF17524.2 ORF110928 - 0.0081 16.4 0.2 0.013 15.7 0.2 1.3 1 0 0 1 1 1 1 Anti-sigma factor CnrY Rrn6 PF10214.9 ORF110804 - 1.2 7.6 10.8 1 7.8 10.8 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor GAPT PF11770.8 ORF110804 - 1.5 8.7 4.0 2.1 8.2 4.0 1.2 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) FUSC PF04632.12 ORF110804 - 2.4 6.6 6.8 2.5 6.6 6.8 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF3328 PF11807.8 ORF110484 - 0.089 12.5 0.2 0.096 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) Ribosomal_L14e PF01929.17 ORF109791 - 8.8e-26 90.2 1.0 1.1e-25 89.9 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L14 DUF1772 PF08592.11 ORF109290 - 0.034 14.5 0.6 0.056 13.8 0.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1772) DUF4007 PF13182.6 ORF108965 - 0.05 12.7 0.5 0.049 12.7 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4007) Ribosomal_L14 PF00238.19 ORF108893 - 2.7e-11 43.6 0.0 3.2e-11 43.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e ABC_tran PF00005.27 ORF108273 - 1.9e-19 70.6 0.0 2.2e-19 70.3 0.0 1.0 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 ORF108273 - 2.4e-05 24.3 0.1 3.2e-05 23.9 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF108273 - 0.00012 21.7 0.1 0.00018 21.2 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF108273 - 0.00012 22.4 0.1 0.00021 21.6 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF108273 - 0.00037 20.9 0.0 0.00039 20.8 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF108273 - 0.00044 20.4 0.3 0.00066 19.9 0.3 1.3 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 ORF108273 - 0.00048 20.1 0.0 0.0005 20.0 0.0 1.1 1 0 0 1 1 1 1 Rad17 P-loop domain NTPase_1 PF03266.15 ORF108273 - 0.002 18.0 0.3 0.0029 17.5 0.3 1.2 1 0 0 1 1 1 1 NTPase DLIC PF05783.11 ORF108273 - 0.0022 16.9 0.1 0.0027 16.6 0.1 1.1 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA_21 PF13304.6 ORF108273 - 0.0035 17.2 0.0 0.005 16.7 0.0 1.3 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system cobW PF02492.19 ORF108273 - 0.006 16.2 0.1 0.0091 15.6 0.1 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 ORF108273 - 0.0088 16.6 0.2 0.011 16.3 0.2 1.3 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 ORF108273 - 0.011 16.3 0.0 0.018 15.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF108273 - 0.012 15.4 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF108273 - 0.014 14.8 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 KaiC ATPase_2 PF01637.18 ORF108273 - 0.014 15.3 0.0 0.02 14.8 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Dynamin_N PF00350.23 ORF108273 - 0.016 15.3 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 Dynamin family RNA12 PF10443.9 ORF108273 - 0.02 13.6 0.0 0.023 13.4 0.0 1.1 1 0 0 1 1 1 0 RNA12 protein PRK PF00485.18 ORF108273 - 0.023 14.5 0.0 0.03 14.1 0.0 1.3 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family PhoH PF02562.16 ORF108273 - 0.024 14.1 0.0 0.03 13.8 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein IstB_IS21 PF01695.17 ORF108273 - 0.024 14.4 0.0 0.025 14.3 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein Septin PF00735.18 ORF108273 - 0.027 13.8 0.0 0.037 13.3 0.0 1.3 1 0 0 1 1 1 0 Septin AAA_24 PF13479.6 ORF108273 - 0.027 14.2 0.0 0.032 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF108273 - 0.027 14.0 0.1 0.034 13.7 0.1 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region T2SSE PF00437.20 ORF108273 - 0.029 13.4 0.5 0.039 13.0 0.4 1.3 1 1 0 1 1 1 0 Type II/IV secretion system protein S4 PF01479.25 ORF108273 - 0.032 14.0 0.5 0.21 11.3 0.2 2.1 2 0 0 2 2 2 0 S4 domain RNA_helicase PF00910.22 ORF108273 - 0.049 14.0 0.0 0.071 13.5 0.0 1.3 1 0 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 ORF108273 - 0.05 12.8 0.1 0.058 12.6 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain ATP_bind_1 PF03029.17 ORF108273 - 0.059 13.1 0.1 0.1 12.4 0.1 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Mg_chelatase PF01078.21 ORF108273 - 0.063 12.7 0.0 0.091 12.1 0.0 1.4 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 ORF108273 - 0.074 12.6 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF108273 - 0.089 12.1 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin SMC_N PF02463.19 ORF108273 - 0.11 12.0 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain FtsK_SpoIIIE PF01580.18 ORF108273 - 0.13 11.6 0.1 0.22 10.8 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family NACHT PF05729.12 ORF108273 - 0.14 12.1 0.1 0.2 11.6 0.1 1.2 1 0 0 1 1 1 0 NACHT domain DUF815 PF05673.13 ORF108273 - 0.17 11.0 0.1 0.3 10.2 0.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF815) AAA_15 PF13175.6 ORF108273 - 0.18 11.5 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain DUF4418 PF14387.6 ORF107656 - 0.057 13.6 0.1 0.094 12.9 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4418) DUF1152 PF06626.12 ORF107656 - 0.13 11.4 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1152) Whib PF02467.16 ORF10751 - 0.0079 16.8 0.2 0.0079 16.8 0.2 1.9 2 0 0 2 2 2 1 Transcription factor WhiB SH3_1 PF00018.28 ORF10751 - 0.14 11.8 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 SH3 domain zf-RING_2 PF13639.6 ORF107381 - 7.4e-12 45.4 1.8 1.5e-11 44.4 1.8 1.5 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF107381 - 1.6e-10 41.1 3.3 4.5e-10 39.6 3.3 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF107381 - 1.5e-08 34.3 1.2 3.8e-08 33.0 1.2 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF107381 - 3.9e-07 30.0 1.7 7.8e-07 29.0 1.7 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF107381 - 5.8e-07 29.4 1.7 7.4e-07 29.0 0.9 1.6 1 1 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF107381 - 6.8e-07 29.1 1.2 1.6e-06 27.9 1.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF107381 - 1.5e-06 28.3 1.0 3.3e-06 27.2 1.0 1.6 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_11 PF17123.5 ORF107381 - 2.6e-06 27.0 1.8 7.5e-06 25.6 1.8 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_4 PF15227.6 ORF107381 - 6.3e-06 26.2 3.3 8.5e-06 25.8 2.0 2.0 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF107381 - 1.3e-05 25.0 0.3 2.7e-05 24.0 0.3 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF107381 - 2.6e-05 23.7 2.3 6.3e-05 22.5 2.3 1.6 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF107381 - 0.00015 21.7 1.5 0.00035 20.6 1.5 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zinc_ribbon_16 PF17034.5 ORF107381 - 0.0026 18.0 1.4 0.005 17.1 1.4 1.5 1 1 0 1 1 1 1 Zinc-ribbon like family Prok-RING_4 PF14447.6 ORF107381 - 0.0026 17.6 3.6 0.014 15.2 3.0 2.1 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING-like PF08746.11 ORF107381 - 0.053 13.8 0.3 0.13 12.6 0.3 1.7 1 1 0 1 1 1 0 RING-like domain zf-C3H2C3 PF17122.5 ORF107381 - 0.13 12.4 2.3 0.42 10.7 2.3 2.0 1 1 0 1 1 1 0 Zinc-finger RINGv PF12906.7 ORF107381 - 0.52 10.5 6.8 1.9 8.6 5.7 2.2 1 1 1 2 2 2 0 RING-variant domain Tfb2 PF03849.14 ORF107141 - 0.017 14.1 0.0 0.025 13.6 0.0 1.3 1 0 0 1 1 1 0 Transcription factor Tfb2 DUF5381 PF17353.2 ORF107141 - 0.019 14.7 0.5 0.028 14.2 0.5 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Ribosomal_L14 PF00238.19 ORF107087 - 2.7e-11 43.6 0.0 3.2e-11 43.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Hepcidin PF06446.12 ORF106920 - 0.005 17.2 3.9 0.33 11.4 0.4 2.3 2 0 0 2 2 2 2 Hepcidin FtsL PF04999.13 ORF106748 - 0.095 12.7 0.9 0.18 11.8 0.0 1.8 2 1 1 3 3 3 0 Cell division protein FtsL START PF01852.19 ORF106023 - 0.0014 18.1 0.0 0.0018 17.7 0.0 1.1 1 0 0 1 1 1 1 START domain Seipin PF06775.14 ORF10312 - 1e-06 29.0 0.3 1.3e-06 28.6 0.3 1.2 1 0 0 1 1 1 1 Putative adipose-regulatory protein (Seipin) TMEM156 PF15106.6 ORF102220 - 0.048 13.1 1.4 0.073 12.5 1.4 1.2 1 0 0 1 1 1 0 TMEM156 protein family DUF4457 PF14652.6 ORF101281 - 1.9e-25 89.8 0.1 2.3e-25 89.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4457) DUF5484 PF17583.2 ORF101281 - 0.12 12.1 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5484) EB1_binding PF05937.11 ORF101200 - 0.22 12.1 2.6 0.25 11.9 2.6 1.1 1 0 0 1 1 1 0 EB-1 Binding Domain F-box PF00646.33 ORF100869 - 2.6 8.0 8.8 0.52 10.3 1.4 2.8 2 1 0 2 2 2 0 F-box domain CitX PF03802.14 NODE_49329_length_379_cov_1.956395_g41442_i0reverse_frame_1 - 4.7 6.9 8.0 8.2 6.1 8.0 1.3 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DUF4282 PF14110.6 NODE_49323_length_379_cov_2.377907_g41436_i0reverse_frame_1 - 0.0093 16.7 0.0 0.012 16.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4282) ERGIC_N PF13850.6 NODE_49323_length_379_cov_2.377907_g41436_i0reverse_frame_1 - 0.034 14.5 0.6 0.045 14.1 0.6 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF948 PF06103.11 NODE_49323_length_379_cov_2.377907_g41436_i0reverse_frame_1 - 0.07 13.4 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF5547 PF17701.1 NODE_49323_length_379_cov_2.377907_g41436_i0reverse_frame_1 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5547) CDC27 PF09507.10 NODE_49322_length_379_cov_2.392442_g41435_i0reverse_frame_1 - 2.7 7.3 23.1 4.2 6.6 23.1 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 DUF1673 PF07895.11 NODE_49320_length_379_cov_2.491279_g41433_i0reverse_frame_1 - 0.041 13.6 1.6 0.048 13.4 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) PaRep2a PF07903.11 NODE_49318_length_379_cov_2.523256_g41431_i0reverse_frame_1 - 0.023 14.5 0.4 0.033 14.0 0.4 1.3 1 0 0 1 1 1 0 PaRep2a protein TIL PF01826.17 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_1 - 0.0052 17.0 4.8 0.0052 17.0 4.8 1.9 2 0 0 2 2 2 1 Trypsin Inhibitor like cysteine rich domain DnaG_DnaB_bind PF08278.11 NODE_49315_length_379_cov_2.953488_g41428_i0reverse_frame_1 - 7.7e-24 84.7 0.0 1e-23 84.2 0.0 1.2 1 0 0 1 1 1 1 DNA primase DnaG DnaB-binding DUF3915 PF13054.6 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_1 - 0.0088 16.0 0.2 0.011 15.7 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) FAM27 PF15832.5 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_1 - 0.014 15.9 3.8 0.014 15.9 3.8 2.9 4 0 0 4 4 4 0 FAM27 D and E protein family Pkinase PF00069.25 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_1 - 1.9e-24 86.5 0.8 2.1e-24 86.3 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_1 - 1.2e-17 64.1 0.4 1.3e-17 64.0 0.4 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_1 - 0.029 13.2 0.6 0.025 13.4 0.6 1.3 1 1 0 1 1 1 0 Fungal protein kinase Abi_2 PF07751.11 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_1 - 0.075 13.3 0.1 0.087 13.1 0.1 1.1 1 0 0 1 1 1 0 Abi-like protein DUF4728 PF15860.5 NODE_49291_length_379_cov_99.700581_g41404_i0reverse_frame_1 - 0.85 10.3 3.3 0.51 11.0 1.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4728) Myc_target_1 PF15179.6 NODE_49283_length_379_cov_134.174419_g41396_i0reverse_frame_1 - 0.061 13.2 0.2 0.075 12.9 0.2 1.1 1 0 0 1 1 1 0 Myc target protein 1 DUF3618 PF12277.8 NODE_49283_length_379_cov_134.174419_g41396_i0forward_frame_1 - 0.22 11.8 0.9 0.22 11.8 0.9 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3618) DUF5542 PF17696.1 NODE_49283_length_379_cov_134.174419_g41396_i0forward_frame_1 - 1 9.5 2.4 2.2 8.5 2.4 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5542) PAN_3 PF08277.12 NODE_49276_length_379_cov_214.063953_g41389_i0forward_frame_1 - 0.049 13.4 3.4 0.069 13.0 3.4 1.3 1 0 0 1 1 1 0 PAN-like domain PAN_2 PF08276.11 NODE_49276_length_379_cov_214.063953_g41389_i0forward_frame_1 - 0.079 13.1 5.5 0.16 12.1 5.5 1.7 1 0 0 1 1 1 0 PAN-like domain PAN_4 PF14295.6 NODE_49276_length_379_cov_214.063953_g41389_i0forward_frame_1 - 1.2 9.1 10.9 0.95 9.4 7.7 2.4 2 1 0 2 2 2 0 PAN domain NtCtMGAM_N PF16863.5 NODE_49275_length_379_cov_248.345930_g41388_i0reverse_frame_1 - 0.007 16.6 0.2 0.0092 16.2 0.2 1.3 1 0 0 1 1 1 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase Ogr_Delta PF04606.12 NODE_49274_length_379_cov_255.206395_g41387_i0reverse_frame_1 - 0.033 14.2 1.1 0.099 12.6 1.1 1.9 1 1 0 1 1 1 0 Ogr/Delta-like zinc finger zf-RING_7 PF02591.15 NODE_49274_length_379_cov_255.206395_g41387_i0reverse_frame_1 - 0.086 13.0 0.0 0.086 13.0 0.0 2.4 3 0 0 3 3 3 0 C4-type zinc ribbon domain zf-CCHC_5 PF14787.6 NODE_49274_length_379_cov_255.206395_g41387_i0reverse_frame_1 - 0.12 12.1 3.1 0.62 9.8 0.5 2.3 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger Lar_restr_allev PF14354.6 NODE_49274_length_379_cov_255.206395_g41387_i0reverse_frame_1 - 0.3 11.5 6.1 4.2 7.8 6.1 2.3 1 1 0 1 1 1 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.10 NODE_49274_length_379_cov_255.206395_g41387_i0reverse_frame_1 - 0.5 10.5 0.1 0.5 10.5 0.1 2.6 3 0 0 3 3 3 0 Zinc ribbon domain DUF3797 PF12677.7 NODE_49274_length_379_cov_255.206395_g41387_i0reverse_frame_1 - 0.85 9.6 6.0 1.4 8.9 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3797) Histone_H2A_C PF16211.5 NODE_49271_length_379_cov_315.906977_g41384_i0reverse_frame_1 - 2.7 7.8 5.4 4.3 7.2 5.4 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Gemini_C4 PF01492.17 NODE_49269_length_379_cov_435.311047_g41382_i0forward_frame_1 - 0.048 13.6 0.0 0.086 12.8 0.0 1.5 1 1 1 2 2 2 0 Geminivirus C4 protein MSA-2c PF12238.8 NODE_49256_length_380_cov_1.440580_g41370_i0reverse_frame_1 - 3.5 7.6 7.4 17 5.4 7.4 1.8 1 1 0 1 1 1 0 Merozoite surface antigen 2c RRM_1 PF00076.22 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 1.7e-21 75.8 5.8 4.7e-12 45.6 0.1 2.7 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 2.7e-05 24.2 0.1 0.016 15.3 0.1 2.3 2 1 0 2 2 2 2 RNA recognition motif RRM_3 PF08777.11 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.00023 21.2 2.9 0.13 12.3 0.1 2.7 1 1 1 2 2 2 2 RNA binding motif PHM7_cyt PF14703.6 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.00027 21.2 0.4 0.022 15.0 0.1 2.1 1 1 1 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter Nup35_RRM_2 PF14605.6 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.00081 19.3 0.1 0.71 9.9 0.0 2.5 2 0 0 2 2 2 2 Nup53/35/40-type RNA recognition motif RNA_bind PF08675.11 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.0044 17.0 0.1 6.6 6.8 0.0 3.0 1 1 1 2 2 2 2 RNA binding domain Spore_II_R PF09551.10 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.075 13.5 0.1 0.097 13.1 0.1 1.2 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) MmoB_DmpM PF02406.17 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.079 13.2 0.1 0.26 11.5 0.0 1.8 2 0 0 2 2 2 0 MmoB/DmpM family RL PF17797.1 NODE_49255_length_380_cov_1.501449_g41369_i0reverse_frame_1 - 0.086 12.8 0.1 0.62 10.1 0.0 2.2 3 0 0 3 3 3 0 RL domain HOCHOB PF17943.1 NODE_49252_length_380_cov_1.852174_g41366_i0reverse_frame_1 - 0.097 13.4 0.1 0.11 13.2 0.1 1.2 1 0 0 1 1 1 0 Homeobox-cysteine loop-homeobox AA_permease PF00324.21 NODE_49248_length_380_cov_2.179710_g41362_i0forward_frame_1 - 2.8e-36 125.1 16.9 3e-36 125.0 16.9 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_49248_length_380_cov_2.179710_g41362_i0forward_frame_1 - 3.8e-08 32.6 18.1 4.4e-08 32.4 18.1 1.0 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 NODE_49248_length_380_cov_2.179710_g41362_i0forward_frame_1 - 0.00024 20.0 9.5 0.00028 19.8 9.5 1.0 1 0 0 1 1 1 1 Spore germination protein Herpes_LMP1 PF05297.11 NODE_49232_length_380_cov_20.602899_g41346_i0forward_frame_1 - 4.7 6.3 9.7 5.5 6.1 9.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) RimK PF08443.11 NODE_49220_length_380_cov_65.402899_g41334_i0forward_frame_1 - 2.1e-05 24.2 0.0 2.3e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain R2K_2 PF18299.1 NODE_49220_length_380_cov_65.402899_g41334_i0forward_frame_1 - 0.083 12.8 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 2 MFS_1 PF07690.16 NODE_49212_length_380_cov_74.730435_g41326_i0forward_frame_1 - 0.0013 17.8 0.0 0.0014 17.6 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily CD20 PF04103.15 NODE_49212_length_380_cov_74.730435_g41326_i0forward_frame_1 - 0.015 15.4 0.1 0.018 15.1 0.1 1.2 1 0 0 1 1 1 0 CD20-like family Tetraspanin PF00335.20 NODE_49212_length_380_cov_74.730435_g41326_i0forward_frame_1 - 0.029 14.1 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Tetraspanin family PhyH PF05721.13 NODE_49208_length_380_cov_80.368116_g41322_i0reverse_frame_1 - 0.012 15.9 0.0 0.017 15.4 0.0 1.3 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) DUF2777 PF10949.8 NODE_49194_length_380_cov_175.994203_g41308_i0forward_frame_1 - 0.017 14.8 1.0 0.022 14.5 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) ESR1_C PF12743.7 NODE_49193_length_380_cov_206.544928_g41307_i0reverse_frame_1 - 0.08 12.7 0.8 0.14 11.9 0.8 1.4 1 0 0 1 1 1 0 Oestrogen-type nuclear receptor final C-terminal MerR PF00376.23 NODE_49186_length_380_cov_601.750725_g41300_i0forward_frame_1 - 0.062 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 MerR family regulatory protein Enkurin PF13864.6 NODE_49185_length_380_cov_1156.411594_g41299_i0forward_frame_1 - 1.9e-20 73.1 10.8 2.3e-20 72.8 10.8 1.1 1 0 0 1 1 1 1 Calmodulin-binding Synaphin PF05835.12 NODE_49185_length_380_cov_1156.411594_g41299_i0forward_frame_1 - 0.012 15.9 8.8 0.014 15.7 8.8 1.1 1 0 0 1 1 1 0 Synaphin protein DUF1493 PF07377.12 NODE_49185_length_380_cov_1156.411594_g41299_i0forward_frame_1 - 0.021 15.3 0.7 0.029 14.8 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) zf-CGNR PF11706.8 NODE_49181_length_381_cov_1.442197_g41295_i0forward_frame_1 - 0.014 15.2 0.9 0.033 14.0 0.3 2.0 2 0 0 2 2 2 0 CGNR zinc finger EIIC-GAT PF03611.14 NODE_49174_length_381_cov_2.216763_g41288_i0reverse_frame_1 - 8.5e-23 81.1 10.4 9.2e-23 81.0 10.4 1.0 1 0 0 1 1 1 1 PTS system sugar-specific permease component AzlD PF05437.12 NODE_49174_length_381_cov_2.216763_g41288_i0reverse_frame_1 - 0.018 15.2 5.4 0.018 15.2 5.4 1.7 2 0 0 2 2 2 0 Branched-chain amino acid transport protein (AzlD) TGFb_propeptide PF00688.18 NODE_49174_length_381_cov_2.216763_g41288_i0forward_frame_1 - 0.0048 16.7 0.2 0.0054 16.5 0.2 1.1 1 0 0 1 1 1 1 TGF-beta propeptide EGF_alliinase PF04863.13 NODE_49171_length_381_cov_2.375723_g41285_i0reverse_frame_1 - 0.022 15.1 0.7 0.067 13.6 0.2 1.9 2 0 0 2 2 2 0 Alliinase EGF-like domain TMEM43 PF07787.12 NODE_49169_length_381_cov_2.459538_g41283_i0forward_frame_1 - 5.6 6.3 6.8 6.9 6.0 6.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 PRIMA1 PF16101.5 NODE_49155_length_381_cov_9.106936_g41269_i0reverse_frame_1 - 0.04 14.0 3.3 0.052 13.6 3.3 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Hamartin PF04388.12 NODE_49142_length_381_cov_73.008671_g41256_i0forward_frame_1 - 0.37 9.4 3.3 0.38 9.4 3.3 1.0 1 0 0 1 1 1 0 Hamartin protein DUF2101 PF09874.9 NODE_49135_length_381_cov_79.838150_g41249_i0forward_frame_1 - 1.2 8.8 7.5 1.5 8.5 7.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) MORN PF02493.20 NODE_49107_length_381_cov_278.757225_g41222_i0reverse_frame_1 - 1.6e-15 56.0 20.5 5.3e-07 29.2 1.2 3.8 4 0 0 4 4 4 3 MORN repeat CbiX PF01903.17 NODE_49105_length_381_cov_485.173410_g41220_i0reverse_frame_1 - 0.063 13.6 0.0 0.081 13.3 0.0 1.2 1 0 0 1 1 1 0 CbiX Thymidylat_synt PF00303.19 NODE_49105_length_381_cov_485.173410_g41220_i0reverse_frame_1 - 0.085 12.0 0.0 0.097 11.8 0.0 1.1 1 0 0 1 1 1 0 Thymidylate synthase Arif-1 PF06770.11 NODE_49099_length_382_cov_1.340058_g41214_i0reverse_frame_3 - 0.021 14.5 4.5 0.024 14.3 4.5 1.1 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks205.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks205.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks205.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks205.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:06 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-RING_5 PF14634.6 NODE_49097_length_382_cov_1.654179_g41212_i0reverse_frame_2 - 0.26 11.3 4.3 0.63 10.0 4.3 1.7 1 0 0 1 1 1 0 zinc-RING finger domain Gal_mutarotas_2 PF13802.6 NODE_49096_length_382_cov_1.674352_g41211_i0reverse_frame_3 - 0.072 13.4 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Galactose mutarotase-like Bestrophin PF01062.21 NODE_49094_length_382_cov_2.121037_g41209_i0reverse_frame_2 - 0.054 12.9 1.4 0.057 12.8 1.4 1.2 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel zf-CXXC PF02008.20 NODE_49090_length_382_cov_2.452450_g41205_i0reverse_frame_2 - 0.073 13.1 3.1 0.17 11.9 3.1 1.6 1 0 0 1 1 1 0 CXXC zinc finger domain DUF4645 PF15488.6 NODE_49090_length_382_cov_2.452450_g41205_i0forward_frame_3 - 0.0014 18.1 0.1 0.0014 18.1 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4645) SUR7 PF06687.12 NODE_49090_length_382_cov_2.452450_g41205_i0forward_frame_2 - 0.0094 15.6 0.1 0.011 15.4 0.1 1.1 1 0 0 1 1 1 1 SUR7/PalI family Peptidase_S28 PF05577.12 NODE_49087_length_382_cov_2.671470_g41202_i0reverse_frame_2 - 0.015 14.1 1.3 0.02 13.7 1.3 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 RR_TM4-6 PF06459.12 NODE_49086_length_382_cov_2.671470_g41201_i0reverse_frame_2 - 3.7 7.3 8.1 4.4 7.1 8.1 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF1415 PF07209.12 NODE_49086_length_382_cov_2.671470_g41201_i0forward_frame_3 - 0.09 12.5 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1415) MS_channel PF00924.18 NODE_49086_length_382_cov_2.671470_g41201_i0forward_frame_3 - 5 6.6 6.6 6.4 6.3 6.6 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel UBA_4 PF14555.6 NODE_49084_length_382_cov_2.982709_g41199_i0reverse_frame_2 - 0.0023 17.7 0.1 0.0036 17.1 0.1 1.3 1 0 0 1 1 1 1 UBA-like domain DUF1493 PF07377.12 NODE_49084_length_382_cov_2.982709_g41199_i0reverse_frame_2 - 0.068 13.6 0.1 0.083 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) TAP_C PF03943.13 NODE_49084_length_382_cov_2.982709_g41199_i0reverse_frame_2 - 0.11 12.2 0.0 0.33 10.6 0.0 1.8 2 0 0 2 2 2 0 TAP C-terminal domain Response_reg PF00072.24 NODE_49083_length_382_cov_3.069164_g41198_i0forward_frame_2 - 3.2e-18 65.9 0.0 4e-18 65.6 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 NODE_49083_length_382_cov_3.069164_g41198_i0forward_frame_2 - 0.099 12.7 1.0 0.24 11.5 0.1 2.1 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal CbiQ PF02361.16 NODE_49081_length_382_cov_3.342939_g41196_i0reverse_frame_3 - 0.051 13.2 0.2 0.067 12.8 0.2 1.1 1 0 0 1 1 1 0 Cobalt transport protein PTEN_C2 PF10409.9 NODE_49081_length_382_cov_3.342939_g41196_i0forward_frame_2 - 0.021 14.6 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein Pex24p PF06398.11 NODE_49081_length_382_cov_3.342939_g41196_i0forward_frame_2 - 0.063 12.3 0.7 0.073 12.1 0.7 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF440 PF04269.12 NODE_49077_length_382_cov_3.795389_g41192_i0forward_frame_2 - 5.8e-27 93.9 1.3 7.4e-27 93.6 1.3 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF440 SHIPPO-rpt PF07004.12 NODE_49076_length_382_cov_4.293948_g41191_i0reverse_frame_2 - 0.06 14.3 2.1 0.06 14.3 2.1 4.7 4 2 0 4 4 4 0 Sperm-tail PG-rich repeat Sec62 PF03839.16 NODE_49076_length_382_cov_4.293948_g41191_i0forward_frame_3 - 0.12 11.8 1.9 0.15 11.5 1.9 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 DUF1951 PF09188.10 NODE_49073_length_382_cov_27.965418_g41188_i0reverse_frame_3 - 0.27 11.2 2.6 3.8 7.5 0.1 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF1951) DUF3974 PF13120.6 NODE_49068_length_382_cov_45.054755_g41183_i0forward_frame_3 - 0.0087 16.2 0.4 0.012 15.7 0.3 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF3974) WBP-1 PF11669.8 NODE_49065_length_382_cov_51.351585_g41180_i0reverse_frame_2 - 0.041 14.5 0.5 0.58 10.8 0.0 2.1 2 0 0 2 2 2 0 WW domain-binding protein 1 YusW PF14039.6 NODE_49062_length_382_cov_61.559078_g41177_i0forward_frame_2 - 0.0057 17.2 0.8 0.01 16.3 0.8 1.4 1 0 0 1 1 1 1 YusW-like protein Asparaginase_2 PF01112.18 NODE_49062_length_382_cov_61.559078_g41177_i0forward_frame_2 - 0.06 12.4 0.2 0.11 11.5 0.2 1.4 1 0 0 1 1 1 0 Asparaginase T6PP_N PF18572.1 NODE_49062_length_382_cov_61.559078_g41177_i0forward_frame_2 - 0.16 11.8 5.4 0.14 12.0 2.1 1.9 1 1 1 2 2 2 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain UPF0242 PF06785.11 NODE_49062_length_382_cov_61.559078_g41177_i0forward_frame_2 - 3.2 7.8 10.2 4.1 7.5 10.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus RSS_P20 PF11757.8 NODE_49062_length_382_cov_61.559078_g41177_i0forward_frame_2 - 3.6 8.1 11.0 0.21 12.1 0.4 2.6 2 1 1 3 3 3 0 Suppressor of RNA silencing P21-like N-terminal domain RskA PF10099.9 NODE_49058_length_382_cov_66.417867_g41173_i0reverse_frame_2 - 0.34 11.2 1.8 17 5.6 0.5 2.0 1 1 1 2 2 2 0 Anti-sigma-K factor rskA Mpv17_PMP22 PF04117.12 NODE_49058_length_382_cov_66.417867_g41173_i0forward_frame_2 - 0.0059 16.8 1.3 0.012 15.8 1.3 1.4 1 0 0 1 1 1 1 Mpv17 / PMP22 family Dip PF17679.1 NODE_49056_length_382_cov_66.858790_g41171_i0reverse_frame_2 - 0.044 13.4 0.1 0.048 13.3 0.1 1.1 1 0 0 1 1 1 0 gp37/Dip protein KH_1 PF00013.29 NODE_49054_length_382_cov_70.446686_g41169_i0forward_frame_3 - 3.6e-11 42.7 0.0 7.6e-11 41.7 0.0 1.5 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 NODE_49054_length_382_cov_70.446686_g41169_i0forward_frame_3 - 0.0023 17.7 0.3 0.0044 16.8 0.0 1.6 2 0 0 2 2 2 1 KH domain KH_5 PF13184.6 NODE_49054_length_382_cov_70.446686_g41169_i0forward_frame_3 - 0.0039 17.2 0.2 0.012 15.7 0.3 1.7 2 0 0 2 2 2 1 NusA-like KH domain RPA_interact_M PF14767.6 NODE_49051_length_382_cov_75.870317_g41167_i0reverse_frame_2 - 0.051 14.1 0.0 0.09 13.4 0.0 1.5 1 0 0 1 1 1 0 Replication protein A interacting middle TMCO5 PF14992.6 NODE_49050_length_382_cov_77.867435_g41166_i0forward_frame_2 - 1.4 8.4 4.9 1.7 8.2 4.9 1.1 1 0 0 1 1 1 0 TMCO5 family PetM PF08041.11 NODE_49041_length_382_cov_128.544669_g41157_i0forward_frame_3 - 3.8 7.2 6.1 6.7 6.4 1.2 2.9 2 1 0 2 2 2 0 PetM family of cytochrome b6f complex subunit 7 RRF_GI PF12614.8 NODE_49040_length_382_cov_130.902017_g41156_i0forward_frame_3 - 0.0081 16.3 1.0 0.011 15.9 1.0 1.2 1 0 0 1 1 1 1 Ribosome recycling factor ACBP PF00887.19 NODE_49040_length_382_cov_130.902017_g41156_i0forward_frame_3 - 0.031 14.5 0.5 0.052 13.8 0.0 1.6 2 0 0 2 2 2 0 Acyl CoA binding protein RCC1_2 PF13540.6 NODE_49038_length_382_cov_141.158501_g41154_i0reverse_frame_2 - 0.042 13.7 3.2 3.3 7.6 1.1 2.4 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Dickkopf_N PF04706.12 NODE_49038_length_382_cov_141.158501_g41154_i0forward_frame_3 - 0.045 14.2 7.0 2.4 8.7 2.1 2.5 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region BLOC1_2 PF10046.9 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.0011 19.2 3.2 0.17 12.2 0.1 2.1 1 1 1 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.0015 18.6 2.7 0.0049 16.9 1.4 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) DUF4200 PF13863.6 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.0021 18.4 6.8 0.0029 18.0 6.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) ADIP PF11559.8 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.007 16.5 5.8 0.0092 16.1 5.8 1.2 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding XhlA PF10779.9 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.011 15.9 3.0 0.018 15.2 3.0 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Histidinol_dh PF00815.20 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.015 14.3 1.0 0.017 14.1 1.0 1.0 1 0 0 1 1 1 0 Histidinol dehydrogenase FapA PF03961.13 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.018 13.6 1.5 0.019 13.6 1.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A zf-C4H2 PF10146.9 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.025 14.9 3.3 0.029 14.7 3.3 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein Ax_dynein_light PF10211.9 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.026 14.5 5.1 0.034 14.1 5.1 1.3 1 0 0 1 1 1 0 Axonemal dynein light chain DUF3584 PF12128.8 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.027 12.0 5.2 0.03 11.9 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) KELK PF15796.5 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.028 14.9 8.4 0.046 14.2 8.4 1.3 1 0 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Fez1 PF06818.15 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.043 14.3 7.1 0.052 14.0 7.1 1.1 1 0 0 1 1 1 0 Fez1 DUF812 PF05667.11 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.049 12.5 5.4 0.053 12.4 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) APG6_N PF17675.1 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.065 13.8 7.3 0.078 13.5 7.3 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Fmp27_WPPW PF10359.9 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.12 11.2 3.8 0.13 11.1 3.8 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain UPF0242 PF06785.11 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.15 12.1 4.5 0.17 11.9 4.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FlaC_arch PF05377.11 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.23 11.9 4.7 0.26 11.7 0.8 2.5 2 1 1 3 3 2 0 Flagella accessory protein C (FlaC) DASH_Dam1 PF08653.10 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.45 10.3 1.8 9.8 6.1 0.3 2.2 2 0 0 2 2 2 0 DASH complex subunit Dam1 UPF0449 PF15136.6 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.5 10.9 6.2 6.5 7.3 0.6 2.3 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 GIT_CC PF16559.5 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.52 10.2 7.3 4 7.4 2.5 2.2 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor EMP24_GP25L PF01105.24 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.66 9.9 3.3 0.33 10.9 1.1 1.6 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD Exonuc_VII_L PF02601.15 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.66 9.5 5.2 0.73 9.3 5.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DMPK_coil PF08826.10 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.69 10.1 13.7 0.4 10.8 3.3 2.7 1 1 1 2 2 2 0 DMPK coiled coil domain like CENP-H PF05837.12 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.79 10.2 9.4 3.4 8.1 3.5 1.9 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DivIC PF04977.15 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 0.92 9.3 7.6 1.6 8.6 1.9 2.2 1 1 1 2 2 2 0 Septum formation initiator Shugoshin_N PF07558.11 NODE_49031_length_382_cov_270.463977_g41147_i0reverse_frame_2 - 2.6 8.0 8.4 3.1 7.8 0.6 2.5 3 0 0 3 3 2 0 Shugoshin N-terminal coiled-coil region PolC_DP2 PF03833.13 NODE_49026_length_382_cov_1335.195965_g41142_i0reverse_frame_3 - 1.7 6.4 7.3 2 6.2 7.3 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 TMEM208_SND2 PF05620.11 NODE_49026_length_382_cov_1335.195965_g41142_i0forward_frame_2 - 6.1 6.6 12.8 0.22 11.3 3.0 2.1 1 1 1 2 2 2 0 SRP-independent targeting protein 2/TMEM208 EcKinase PF02958.20 NODE_49024_length_382_cov_4750.270893_g41140_i0reverse_frame_2 - 0.069 12.5 0.1 0.077 12.3 0.1 1.2 1 1 0 1 1 1 0 Ecdysteroid kinase KAR9 PF08580.10 NODE_49024_length_382_cov_4750.270893_g41140_i0forward_frame_3 - 3.9 5.9 11.0 4.6 5.6 11.0 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 Bundlin PF05307.11 NODE_49018_length_383_cov_1.500000_g41134_i0forward_frame_2 - 0.031 14.1 5.0 0.031 14.1 5.0 2.0 2 1 0 2 2 2 0 Bundlin YcbB PF08664.10 NODE_49011_length_383_cov_1.974138_g41127_i0reverse_frame_3 - 0.11 12.6 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 YcbB domain Pkinase PF00069.25 NODE_49010_length_383_cov_2.020115_g41126_i0forward_frame_3 - 6.5e-27 94.5 3.1 7.6e-27 94.3 3.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49010_length_383_cov_2.020115_g41126_i0forward_frame_3 - 4.5e-18 65.5 1.3 5.1e-18 65.3 1.3 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_49010_length_383_cov_2.020115_g41126_i0forward_frame_3 - 6.1e-06 25.8 0.4 7.3e-06 25.5 0.4 1.0 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 NODE_49010_length_383_cov_2.020115_g41126_i0forward_frame_3 - 0.0032 16.9 0.0 0.0045 16.4 0.0 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RVT_2 PF07727.14 NODE_49007_length_383_cov_2.143678_g41123_i0reverse_frame_2 - 3.6e-12 46.4 0.0 4.4e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) AAA_6 PF12774.7 NODE_49004_length_383_cov_2.356322_g41120_i0forward_frame_2 - 0.013 14.5 0.2 0.017 14.1 0.2 1.1 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region LRR_8 PF13855.6 NODE_49001_length_383_cov_2.485632_g41117_i0reverse_frame_3 - 0.007 16.1 0.1 0.021 14.6 0.0 1.8 1 1 0 1 1 1 1 Leucine rich repeat Nucleoporin_FG PF13634.6 NODE_48993_length_383_cov_2.956897_g41109_i0forward_frame_3 - 0.011 16.5 7.2 0.66 10.9 0.7 2.2 1 1 1 2 2 2 0 Nucleoporin FG repeat region DUF5441 PF17513.2 NODE_48992_length_383_cov_3.270115_g41108_i0forward_frame_2 - 0.022 14.5 0.0 0.028 14.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5441) DUF1405 PF07187.11 NODE_48987_length_383_cov_3.511494_g41103_i0forward_frame_3 - 0.022 14.8 0.1 0.028 14.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1405) Nrap_D3 PF17404.2 NODE_48984_length_383_cov_4.295977_g41100_i0reverse_frame_2 - 0.071 13.2 1.0 0.45 10.6 0.1 2.0 1 1 0 2 2 2 0 Nrap protein domain 3 RE_HaeIII PF09556.10 NODE_48977_length_383_cov_46.827586_g41093_i0forward_frame_2 - 0.019 14.1 3.8 0.022 13.9 3.8 1.2 1 0 0 1 1 1 0 HaeIII restriction endonuclease Peptidase_M15_2 PF05951.13 NODE_48977_length_383_cov_46.827586_g41093_i0forward_frame_2 - 0.025 14.3 0.6 0.05 13.3 0.4 1.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF882) DBC1 PF14443.6 NODE_48977_length_383_cov_46.827586_g41093_i0forward_frame_2 - 0.057 13.4 0.1 0.083 12.9 0.1 1.4 1 0 0 1 1 1 0 DBC1 FoP_duplication PF13865.6 NODE_48976_length_383_cov_51.077586_g41092_i0reverse_frame_3 - 0.84 10.2 10.2 0.49 11.0 1.5 2.2 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 DUF2576 PF10845.8 NODE_48973_length_383_cov_63.839080_g41089_i0reverse_frame_2 - 0.017 14.7 0.2 0.033 13.8 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) PELOTA_1 PF15608.6 NODE_48973_length_383_cov_63.839080_g41089_i0reverse_frame_2 - 0.026 14.4 0.0 0.051 13.5 0.0 1.5 1 0 0 1 1 1 0 PELOTA RNA binding domain DUF4844 PF16133.5 NODE_48973_length_383_cov_63.839080_g41089_i0forward_frame_2 - 0.049 14.2 0.2 0.099 13.2 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4844) NSP2-B_epitope PF14757.6 NODE_48968_length_383_cov_71.827586_g41084_i0reverse_frame_3 - 0.081 12.6 0.6 0.12 12.1 0.6 1.2 1 0 0 1 1 1 0 Immunogenic region of nsp2 protein of arterivirus polyprotein DUF1945 PF09178.10 NODE_48967_length_383_cov_75.109195_g41083_i0forward_frame_3 - 0.054 13.7 0.4 0.11 12.7 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1945) Herpes_UL51 PF04540.13 NODE_48965_length_383_cov_76.646552_g41081_i0reverse_frame_3 - 0.25 11.1 0.5 0.41 10.4 0.3 1.4 1 1 1 2 2 2 0 Herpesvirus UL51 protein VEGFR-2_TMD PF17988.1 NODE_48963_length_383_cov_81.022989_g41079_i0forward_frame_3 - 0.11 11.9 2.3 0.2 11.1 2.3 1.4 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain SCO1-SenC PF02630.14 NODE_48960_length_383_cov_87.307471_g41076_i0reverse_frame_2 - 3.3 7.6 4.7 20 5.1 2.5 2.1 2 0 0 2 2 2 0 SCO1/SenC Apis_Csd PF11671.8 NODE_48959_length_383_cov_88.221264_g41075_i0reverse_frame_2 - 0.23 11.5 0.1 0.37 10.8 0.1 1.3 1 0 0 1 1 1 0 Complementary sex determiner protein Conotoxin_I2 PF17557.2 NODE_48959_length_383_cov_88.221264_g41075_i0forward_frame_2 - 0.028 14.5 2.3 0.028 14.5 2.3 2.6 3 0 0 3 3 3 0 I2-superfamily conotoxins AMMECR1 PF01871.17 NODE_48949_length_383_cov_111.284483_g41065_i0reverse_frame_3 - 0.071 12.7 0.0 0.21 11.2 0.0 1.7 1 1 0 1 1 1 0 AMMECR1 MORN PF02493.20 NODE_48945_length_383_cov_142.051724_g41061_i0reverse_frame_3 - 1.1e-05 25.0 21.8 2.5e-05 23.9 0.9 5.3 5 1 0 5 5 5 3 MORN repeat Rtt106_N PF18215.1 NODE_48945_length_383_cov_142.051724_g41061_i0forward_frame_3 - 0.099 12.4 0.3 0.43 10.4 0.1 1.9 2 0 0 2 2 2 0 Histone chaperone Rtt106 N-terminal domain SCF PF02404.15 NODE_48945_length_383_cov_142.051724_g41061_i0forward_frame_3 - 1 8.7 6.4 1.4 8.2 6.4 1.1 1 0 0 1 1 1 0 Stem cell factor X PF00739.19 NODE_48942_length_383_cov_207.382184_g41058_i0forward_frame_2 - 0.23 11.6 3.8 0.35 11.0 3.6 1.4 1 1 0 1 1 1 0 Trans-activation protein X DUF5068 PF16781.5 NODE_48941_length_383_cov_218.715517_g41057_i0reverse_frame_3 - 0.0029 17.4 0.1 0.0032 17.3 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5068) RepA_N PF06970.11 NODE_48941_length_383_cov_218.715517_g41057_i0reverse_frame_3 - 0.023 14.6 0.3 0.075 13.0 0.2 1.8 2 0 0 2 2 2 0 Replication initiator protein A (RepA) N-terminus dsRBD2 PF17842.1 NODE_48940_length_383_cov_227.376437_g41056_i0reverse_frame_2 - 0.027 14.7 1.6 0.028 14.6 1.6 1.1 1 0 0 1 1 1 0 Double-stranded RNA binding domain 2 Lamprin PF06403.11 NODE_48939_length_383_cov_230.660920_g41055_i0forward_frame_2 - 2.7 7.9 29.9 1.8 8.5 5.1 3.1 1 1 2 3 3 3 0 Lamprin Proteasome_A_N PF10584.9 NODE_48937_length_383_cov_254.790230_g41053_i0forward_frame_2 - 0.69 9.7 2.3 32 4.3 0.2 2.7 2 0 0 2 2 2 0 Proteasome subunit A N-terminal signature Ldl_recept_a PF00057.18 NODE_48931_length_383_cov_10146.103448_g41048_i0reverse_frame_2 - 0.038 14.2 1.9 2.6 8.4 0.1 2.2 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A DUF5540 PF17694.1 NODE_48931_length_383_cov_10146.103448_g41048_i0forward_frame_2 - 0.56 10.8 5.0 6.3 7.4 0.4 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5540) NOGCT PF08155.11 NODE_48930_length_383_cov_44425.514368_g41047_i0reverse_frame_2 - 0.085 12.8 2.3 0.14 12.2 0.1 2.2 2 0 0 2 2 2 0 NOGCT (NUC087) domain cNMP_binding PF00027.29 NODE_48928_length_384_cov_1.512894_g41045_i0reverse_frame_3 - 0.069 13.2 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Leader_Trp PF08255.11 NODE_48927_length_384_cov_1.661891_g41044_i0reverse_frame_2 - 2.7e-07 29.9 1.3 4.9e-07 29.1 1.3 1.5 1 0 0 1 1 1 1 Trp-operon Leader Peptide Tmemb_55A PF09788.9 NODE_48927_length_384_cov_1.661891_g41044_i0forward_frame_3 - 0.016 14.3 3.1 0.018 14.1 3.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 55A FBP_C PF16571.5 NODE_48925_length_384_cov_1.879656_g41042_i0forward_frame_3 - 0.28 10.7 2.4 0.35 10.4 2.4 1.1 1 0 0 1 1 1 0 FBP C-terminal treble-clef zinc-finger YccJ PF13993.6 NODE_48922_length_384_cov_2.510029_g41039_i0reverse_frame_2 - 1.1e-07 32.1 0.2 1.4e-07 31.7 0.2 1.2 1 0 0 1 1 1 1 YccJ-like protein RVT_2 PF07727.14 NODE_48921_length_384_cov_2.527221_g41038_i0reverse_frame_3 - 0.013 15.2 0.0 0.014 15.0 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) UL45 PF05473.12 NODE_48921_length_384_cov_2.527221_g41038_i0forward_frame_3 - 0.011 15.4 1.8 0.012 15.3 1.8 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like PI_PP_I PF18363.1 NODE_48914_length_384_cov_3.372493_g41031_i0forward_frame_2 - 0.0056 16.8 0.0 0.0087 16.2 0.0 1.3 1 0 0 1 1 1 1 Phosphoinositide phosphatase insertion domain SIS_2 PF13580.6 NODE_48913_length_384_cov_3.432665_g41030_i0reverse_frame_3 - 0.12 12.4 0.3 0.18 11.8 0.1 1.5 2 0 0 2 2 2 0 SIS domain RepA1_leader PF08048.12 NODE_48903_length_384_cov_6.495702_g41020_i0forward_frame_3 - 0.25 11.6 4.0 0.64 10.3 4.0 1.7 1 0 0 1 1 1 0 Tap RepA1 leader peptide Med9 PF07544.13 NODE_48902_length_384_cov_15.747851_g41019_i0reverse_frame_3 - 0.032 14.3 0.2 0.051 13.7 0.2 1.2 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 ABC_tran PF00005.27 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 3e-20 73.1 0.0 3.3e-20 73.0 0.0 1.0 1 0 0 1 1 1 1 ABC transporter SRP54 PF00448.22 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 8e-05 22.4 0.1 0.00012 21.8 0.1 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_21 PF13304.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.016 15.1 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.019 15.5 4.4 0.04 14.4 4.4 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.042 13.6 0.0 0.059 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.049 13.3 1.6 0.16 11.6 1.6 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 NODE_48898_length_384_cov_47.424069_g41016_i0forward_frame_2 - 0.051 13.3 0.5 0.095 12.5 0.5 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF5345 PF17280.2 NODE_48895_length_384_cov_55.782235_g41013_i0reverse_frame_3 - 0.017 15.0 0.1 0.026 14.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5345) UPF0179 PF03684.13 NODE_48895_length_384_cov_55.782235_g41013_i0forward_frame_2 - 0.036 14.0 3.6 0.049 13.5 3.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0179) DAP10 PF07213.11 NODE_48892_length_384_cov_61.080229_g41010_i0forward_frame_3 - 0.04 13.9 1.8 0.061 13.3 1.8 1.3 1 0 0 1 1 1 0 DAP10 membrane protein NIF PF03031.18 NODE_48888_length_384_cov_72.991404_g41006_i0reverse_frame_2 - 3.9e-29 101.5 0.6 5.9e-29 100.8 0.3 1.4 1 1 1 2 2 2 1 NLI interacting factor-like phosphatase GCIP PF13324.6 NODE_48888_length_384_cov_72.991404_g41006_i0forward_frame_2 - 0.12 11.9 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting Tax PF02959.16 NODE_48885_length_384_cov_75.593123_g41003_i0forward_frame_3 - 0.16 11.4 0.4 0.31 10.4 0.3 1.5 1 1 1 2 2 2 0 HTLV Tax GCM PF03615.15 NODE_48882_length_384_cov_97.687679_g41000_i0reverse_frame_3 - 0.054 13.4 4.3 0.07 13.0 4.3 1.2 1 0 0 1 1 1 0 GCM motif protein DUF3987 PF13148.6 NODE_48880_length_384_cov_99.647564_g40998_i0reverse_frame_2 - 0.23 10.4 4.3 0.33 9.9 4.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3987) HCMV_UL139 PF12507.8 NODE_48879_length_384_cov_104.263610_g40997_i0forward_frame_3 - 3.9 7.9 7.4 7.2 7.0 7.4 1.5 1 1 0 1 1 1 0 Human Cytomegalovirus UL139 protein DUF1467 PF07330.12 NODE_48879_length_384_cov_104.263610_g40997_i0forward_frame_2 - 0.068 13.1 0.0 0.13 12.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1467) DUF4248 PF14053.6 NODE_48874_length_384_cov_128.707736_g40992_i0forward_frame_3 - 0.079 13.0 0.1 0.18 11.9 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4248) AAA_8 PF12780.7 NODE_48868_length_384_cov_195.426934_g40986_i0forward_frame_2 - 1.6e-08 34.2 0.2 2.8e-08 33.4 0.0 1.4 2 0 0 2 2 2 1 P-loop containing dynein motor region D4 YscO-like PF16789.5 NODE_48868_length_384_cov_195.426934_g40986_i0forward_frame_2 - 0.0027 17.8 1.7 0.0032 17.5 1.7 1.1 1 0 0 1 1 1 1 YscO-like protein TSNAXIP1_N PF15739.5 NODE_48868_length_384_cov_195.426934_g40986_i0forward_frame_2 - 0.073 13.5 2.1 0.15 12.4 1.5 1.6 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus Mobilization_B PF17511.2 NODE_48868_length_384_cov_195.426934_g40986_i0forward_frame_2 - 0.15 12.4 0.2 0.23 11.8 0.2 1.3 1 0 0 1 1 1 0 Mobilization protein B DUF5556 PF17711.1 NODE_48867_length_384_cov_236.481375_g40985_i0reverse_frame_2 - 0.051 13.5 1.7 0.062 13.2 1.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5556) DAP_B PF07930.12 NODE_48861_length_384_cov_417.979943_g40979_i0reverse_frame_3 - 0.16 12.0 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 D-aminopeptidase, domain B PHD PF00628.29 NODE_48858_length_384_cov_1201.077364_g40976_i0reverse_frame_2 - 0.049 13.5 4.0 0.17 11.8 4.0 1.9 1 1 0 1 1 1 0 PHD-finger She9_MDM33 PF05546.11 NODE_48858_length_384_cov_1201.077364_g40976_i0reverse_frame_2 - 0.084 12.7 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 She9 / Mdm33 family zf-B_box PF00643.24 NODE_48858_length_384_cov_1201.077364_g40976_i0reverse_frame_2 - 0.22 11.7 6.0 0.4 10.9 6.0 1.4 1 0 0 1 1 1 0 B-box zinc finger zf-RING-like PF08746.11 NODE_48858_length_384_cov_1201.077364_g40976_i0reverse_frame_2 - 0.63 10.4 6.4 1.6 9.1 0.6 2.2 1 1 1 2 2 2 0 RING-like domain Sec23_BS PF08033.12 NODE_48858_length_384_cov_1201.077364_g40976_i0forward_frame_3 - 0.051 14.3 0.1 0.091 13.5 0.1 1.4 1 0 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain Glycolytic PF00274.19 NODE_48854_length_384_cov_4733.120344_g40973_i0reverse_frame_2 - 4e-05 22.5 0.2 4.8e-05 22.2 0.2 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Toxin_28 PF08115.11 ORF99139 - 0.11 12.4 4.7 0.2 11.5 4.7 1.4 1 0 0 1 1 1 0 SFI toxin family HemY_N PF07219.13 ORF99139 - 4 7.7 5.9 6.8 6.9 5.9 1.4 1 1 0 1 1 1 0 HemY protein N-terminus GDA1_CD39 PF01150.17 ORF98939 - 0.035 12.8 0.1 0.037 12.7 0.1 1.1 1 0 0 1 1 1 0 GDA1/CD39 (nucleoside phosphatase) family PanZ PF12568.8 ORF9823 - 1.3e-50 170.4 0.0 1.5e-50 170.2 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_1 PF00583.25 ORF9823 - 2.5e-05 24.5 0.0 2.9e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF9823 - 0.025 14.5 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF9823 - 0.027 14.9 0.0 0.037 14.5 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF9823 - 0.073 13.0 0.1 0.16 12.0 0.1 1.5 1 0 0 1 1 1 0 FR47-like protein DUF1005 PF06219.12 ORF98184 - 0.0014 17.8 0.2 0.0018 17.4 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1005) TMEM71 PF15121.6 ORF98184 - 0.058 13.1 1.3 0.075 12.7 1.3 1.2 1 0 0 1 1 1 0 TMEM71 protein family MPS-4 PF17523.2 ORF97908 - 0.42 10.8 3.5 0.72 10.0 3.5 1.4 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF4539 PF15072.6 ORF9597 - 0.15 12.1 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4539) DUF5637 PF18687.1 ORF95915 - 0.63 10.1 4.2 2.5 8.2 0.8 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5637) Torus PF16131.5 ORF95915 - 2 9.1 5.3 0.23 12.2 0.8 1.7 1 1 0 2 2 2 0 Torus domain Ribosomal_L2 PF00181.23 ORF95875 - 8.3e-16 57.7 0.3 1.2e-15 57.2 0.3 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L2_C PF03947.18 ORF95875 - 6.6e-06 26.3 0.1 1.1e-05 25.6 0.1 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain RNaseH_C PF09293.10 ORF9502 - 0.023 15.1 2.0 0.023 15.1 2.0 2.0 1 1 1 2 2 2 0 T4 RNase H, C terminal DUF4375 PF14300.6 ORF9502 - 0.077 13.3 6.5 0.1 12.8 6.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4375) Peptidase_M73 PF12389.8 ORF9502 - 0.45 10.3 6.0 0.61 9.9 6.0 1.3 1 1 0 1 1 1 0 Camelysin metallo-endopeptidase MDM10 PF12519.8 ORF9502 - 1.7 7.4 6.8 1.9 7.2 6.8 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 DNA_pol3_a_NII PF11490.8 ORF9502 - 1.9 8.4 24.9 0.16 11.9 10.5 2.3 1 1 1 2 2 2 0 DNA polymerase III polC-type N-terminus II Metallothio_5 PF02067.15 ORF94816 - 1 9.6 13.0 1.2 9.4 3.1 2.3 2 0 0 2 2 2 0 Metallothionein family 5 SHIPPO-rpt PF07004.12 ORF9479 - 0.0078 17.1 0.6 0.024 15.5 0.0 2.1 2 0 0 2 2 2 1 Sperm-tail PG-rich repeat Arf PF00025.21 ORF94471 - 1.7e-21 76.4 0.0 2.2e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Salt_tol_Pase PF09506.10 ORF93880 - 0.032 13.0 0.1 0.034 12.9 0.1 1.1 1 0 0 1 1 1 0 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) Arc PF03869.14 ORF93880 - 0.098 12.5 1.5 0.11 12.4 0.1 1.8 2 1 0 2 2 2 0 Arc-like DNA binding domain DUF5554 PF17709.1 ORF93754 - 1.5 9.0 14.1 0.2 11.8 6.8 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF5554) DUF4842 PF16130.5 ORF92177 - 0.23 11.6 8.2 0.28 11.4 8.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4842) HIG_1_N PF04588.13 ORF91812 - 0.0046 17.1 0.3 0.0089 16.2 0.3 1.7 1 1 0 1 1 1 1 Hypoxia induced protein conserved region DUF677 PF05055.12 ORF9022 - 0.21 10.5 1.8 0.26 10.1 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF677) OrfB_IS605 PF01385.19 ORF9022 - 1.1 9.5 6.7 1.7 8.9 6.7 1.3 1 0 0 1 1 1 0 Probable transposase Thioredoxin PF00085.20 ORF89750 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF89750 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF89750 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF89750 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF89750 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF89750 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF89750 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF89750 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF89750 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF89750 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF89750 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF89750 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein V4R PF02830.18 ORF88857 - 0.084 12.9 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 V4R domain Pex24p PF06398.11 ORF88524 - 0.15 11.0 1.5 0.18 10.8 1.5 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Imm58 PF15581.6 ORF88524 - 2.2 8.4 4.1 2.2 8.4 2.4 1.8 1 1 1 2 2 2 0 Immunity protein 58 TnpV PF14198.6 ORF87600 - 0.058 13.4 1.4 0.091 12.7 0.4 1.7 1 1 1 2 2 2 0 Transposon-encoded protein TnpV DUF951 PF06107.11 ORF86418 - 0.067 13.1 4.3 4.4 7.3 0.2 2.4 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) TnpV PF14198.6 ORF85931 - 0.058 13.4 1.4 0.091 12.7 0.4 1.7 1 1 1 2 2 2 0 Transposon-encoded protein TnpV DUF5554 PF17709.1 ORF83010 - 2.4 8.3 14.5 0.2 11.8 6.8 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF5554) Pkinase PF00069.25 ORF81904 - 4.7e-25 88.4 0.1 5.3e-25 88.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF81904 - 4.7e-13 49.0 0.0 5.5e-13 48.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF81904 - 0.013 14.8 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Thioredoxin PF00085.20 ORF81485 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF81485 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF81485 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF81485 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF81485 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF81485 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF81485 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF81485 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF81485 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF81485 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF81485 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF81485 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein Adeno_PV PF03910.13 ORF81431 - 0.0013 17.5 5.2 0.0014 17.4 5.2 1.1 1 0 0 1 1 1 1 Adenovirus minor core protein PV ARL6IP6 PF15062.6 ORF80857 - 0.083 13.0 0.5 2.9 8.1 0.1 2.1 1 1 1 2 2 2 0 Haemopoietic lineage transmembrane helix Thioredoxin PF00085.20 ORF78737 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF78737 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF78737 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF78737 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF78737 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF78737 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF78737 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF78737 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF78737 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF78737 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF78737 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF78737 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein AAA_11 PF13086.6 ORF78579 - 4.9 6.9 10.3 5.6 6.7 10.3 1.0 1 0 0 1 1 1 0 AAA domain DiS_P_DiS PF06750.13 ORF77331 - 0.055 13.6 0.4 0.055 13.6 0.4 2.1 2 1 0 2 2 2 0 Bacterial Peptidase A24 N-terminal domain DUF677 PF05055.12 ORF75886 - 0.21 10.5 1.8 0.26 10.1 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF677) OrfB_IS605 PF01385.19 ORF75886 - 1.1 9.5 6.7 1.7 8.9 6.7 1.3 1 0 0 1 1 1 0 Probable transposase DUF4616 PF15394.6 ORF75054 - 0.086 11.8 0.0 0.092 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4616) Pex14_N PF04695.13 ORF74703 - 0.26 11.9 3.1 0.31 11.7 3.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region SDH_alpha PF03313.15 ORF74559 - 7e-57 193.1 8.6 7.7e-57 192.9 8.6 1.0 1 0 0 1 1 1 1 Serine dehydratase alpha chain MmgE_PrpD PF03972.14 ORF74559 - 0.037 12.6 0.6 0.039 12.5 0.6 1.1 1 0 0 1 1 1 0 MmgE/PrpD family Mntp PF02659.15 ORF72063 - 0.062 13.1 2.8 0.081 12.7 2.8 1.1 1 0 0 1 1 1 0 Putative manganese efflux pump UXS1_N PF11803.8 ORF71328 - 0.11 12.9 0.1 0.22 11.9 0.1 1.6 1 1 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal DUF4616 PF15394.6 ORF69551 - 0.086 11.8 0.0 0.092 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4616) GST_C_2 PF13410.6 ORF68690 - 5.8e-10 39.0 0.1 1.1e-09 38.2 0.1 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF68690 - 0.0007 19.8 0.0 0.0013 18.9 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain RE_AlwI PF09491.10 ORF65284 - 0.044 12.6 2.9 0.053 12.3 2.9 1.0 1 0 0 1 1 1 0 AlwI restriction endonuclease DUF2515 PF10720.9 ORF65192 - 0.088 12.0 2.5 0.11 11.6 2.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2515) Galactosyl_T PF01762.21 ORF64300 - 0.022 14.6 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Galactosyltransferase DUF1980 PF09323.10 ORF64201 - 0.042 13.8 1.4 0.054 13.4 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) zf-CCCH_8 PF18633.1 ORF64201 - 2.2 8.4 4.3 2.8 8.1 0.6 2.5 2 0 0 2 2 2 0 Zinc-finger antiviral protein (ZAP) zinc finger domain 3 TMEM135_C_rich PF15982.5 ORF63910 - 0.082 13.5 2.5 0.15 12.7 0.1 2.1 1 1 1 2 2 2 0 N-terminal cysteine-rich region of Transmembrane protein 135 zf-P11 PF03854.14 ORF62264 - 7.6 6.3 9.0 1.1 9.0 2.5 2.6 2 1 1 3 3 3 0 P-11 zinc finger Ank_4 PF13637.6 ORF60171 - 5.1e-09 36.5 0.1 8.5e-05 23.0 0.0 2.7 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF60171 - 8.4e-06 25.8 0.0 0.01 16.3 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF60171 - 1.2e-05 25.8 0.0 2.3e-05 24.9 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF60171 - 0.00052 20.2 0.0 0.0021 18.3 0.0 2.1 2 1 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF60171 - 0.0034 17.8 0.0 0.32 11.5 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF59377 - 6.4e-18 65.1 0.1 7.9e-15 55.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF59377 - 3.3e-13 49.6 0.4 7.1e-07 29.4 0.3 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF59377 - 8.2e-12 45.0 0.6 0.00038 20.8 0.0 3.5 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF59377 - 1.3e-11 44.7 0.1 1.5e-05 25.5 0.0 2.3 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF59377 - 5.1e-10 38.7 0.0 0.00043 20.5 0.0 3.3 4 0 0 4 4 4 2 Ankyrin repeat RVP PF00077.20 ORF59377 - 0.0027 18.0 0.9 0.65 10.3 0.0 3.0 1 1 1 3 3 3 1 Retroviral aspartyl protease Asp_protease_2 PF13650.6 ORF59377 - 0.011 16.3 0.2 0.03 14.9 0.0 1.8 3 0 0 3 3 3 0 Aspartyl protease DUF334 PF03904.13 ORF5751 - 0.2 11.2 4.2 0.4 10.2 4.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF334) Phage_Nu1 PF07471.12 ORF57486 - 0.0036 17.1 0.2 0.005 16.6 0.2 1.1 1 0 0 1 1 1 1 Phage DNA packaging protein Nu1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks206.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks206.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks206.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks206.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5371 PF17341.2 ORF56470 - 0.021 15.0 0.8 6.8 7.0 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5371) DUF2784 PF10861.8 ORF56441 - 0.27 11.3 2.7 0.39 10.8 2.7 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF2784) Terminase_5 PF06056.12 ORF56060 - 0.11 12.4 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) zf-CHY PF05495.12 ORF54709 - 7.2e-13 48.8 14.9 1.7e-12 47.6 14.9 1.6 1 0 0 1 1 1 1 CHY zinc finger Zn-ribbon_8 PF09723.10 ORF54709 - 0.0059 16.7 4.0 0.0059 16.7 4.0 2.3 2 1 1 3 3 3 1 Zinc ribbon domain GP3_package PF16677.5 ORF54709 - 0.11 12.6 0.1 0.19 11.9 0.1 1.4 1 0 0 1 1 1 0 DNA-packaging protein gp3 C1_4 PF07975.12 ORF54709 - 0.17 12.1 11.0 0.91 9.8 11.0 2.1 1 1 1 2 2 2 0 TFIIH C1-like domain SIR2 PF02146.17 ORF54709 - 0.18 11.7 2.1 0.27 11.2 2.0 1.3 1 1 0 1 1 1 0 Sir2 family RNA_POL_M_15KD PF02150.16 ORF54709 - 0.2 11.5 8.1 4.9 7.1 0.1 3.3 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit HypA PF01155.19 ORF54709 - 2.1 8.4 7.8 5.5 7.1 7.8 1.8 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Thioredoxin PF00085.20 ORF54430 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF54430 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF54430 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF54430 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF54430 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF54430 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF54430 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF54430 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF54430 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF54430 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF54430 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF54430 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein GASA PF02704.14 ORF5438 - 0.96 9.7 6.9 3.2 8.0 1.9 2.2 2 0 0 2 2 2 0 Gibberellin regulated protein Rnk_N PF14760.6 ORF50315 - 0.22 12.0 0.0 0.41 11.2 0.0 1.4 1 0 0 1 1 1 0 Rnk N-terminus LRR_4 PF12799.7 ORF50315 - 7.8 7.1 12.6 1.8 9.1 4.7 3.1 2 2 0 2 2 2 0 Leucine Rich repeats (2 copies) Tctex-1 PF03645.13 ORF49830 - 8e-26 90.3 0.6 9.3e-26 90.1 0.6 1.1 1 0 0 1 1 1 1 Tctex-1 family Ribosomal_S20p PF01649.18 ORF49830 - 0.041 14.5 0.7 0.058 14.0 0.7 1.2 1 0 0 1 1 1 0 Ribosomal protein S20 RVT_3 PF13456.6 ORF49170 - 0.13 12.1 0.4 0.28 11.0 0.1 1.8 2 0 0 2 2 2 0 Reverse transcriptase-like PhaG_MnhG_YufB PF03334.14 ORF48646 - 0.016 15.4 0.0 0.025 14.8 0.0 1.3 1 0 0 1 1 1 0 Na+/H+ antiporter subunit Toxin_28 PF08115.11 ORF48351 - 0.11 12.4 4.7 0.2 11.5 4.7 1.4 1 0 0 1 1 1 0 SFI toxin family HemY_N PF07219.13 ORF48351 - 4 7.7 5.9 6.8 6.9 5.9 1.4 1 1 0 1 1 1 0 HemY protein N-terminus 4PPT_N PF17837.1 ORF46871 - 0.05 13.7 1.7 0.26 11.5 0.1 2.5 2 1 1 3 3 3 0 4'-phosphopantetheinyl transferase N-terminal domain DUF1570 PF07607.11 ORF4682 - 0.083 13.2 0.0 0.11 12.8 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1570) DUF599 PF04654.12 ORF4682 - 0.18 11.2 2.4 0.92 8.9 2.4 1.9 1 1 0 1 1 1 0 Protein of unknown function, DUF599 HP_OMP PF01856.17 ORF44909 - 0.06 13.4 0.0 0.071 13.2 0.0 1.2 1 0 0 1 1 1 0 Helicobacter outer membrane protein Kelch_2 PF07646.15 ORF44158 - 2.4e-06 27.3 0.7 0.019 15.0 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF44158 - 1e-05 25.4 0.0 0.0016 18.4 0.0 2.2 2 0 0 2 2 2 1 Kelch motif Kelch_3 PF13415.6 ORF44158 - 2e-05 24.7 1.4 0.003 17.8 1.2 2.7 2 1 0 2 2 2 1 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF44158 - 2.1e-05 24.7 1.6 0.018 15.3 0.0 2.9 2 1 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 ORF44158 - 0.0063 16.1 1.0 0.014 15.0 0.0 2.0 2 1 0 2 2 2 1 Kelch motif TSGP1 PF07771.11 ORF44158 - 0.061 13.5 0.8 0.061 13.5 0.8 1.5 2 0 0 2 2 2 0 Tick salivary peptide group 1 Filo_glycop PF01611.16 ORF44158 - 0.1 11.6 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Filovirus glycoprotein Kelch_4 PF13418.6 ORF44158 - 1.8 8.7 4.2 2.3 8.3 0.0 2.4 2 1 0 2 2 2 0 Galactose oxidase, central domain Syntaxin-18_N PF10496.9 ORF43916 - 0.1 12.9 4.1 0.25 11.6 4.1 1.8 1 1 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus HEPN_LA2681 PF18733.1 ORF43027 - 0.0081 15.5 0.0 0.009 15.3 0.0 1.2 1 0 0 1 1 1 1 LA2681-like HEPN TCR_zetazeta PF11628.8 ORF43027 - 0.014 15.1 0.1 0.029 14.0 0.1 1.5 1 0 0 1 1 1 0 T-cell surface glycoprotein CD3 zeta chain TPR_1 PF00515.28 ORF43027 - 0.062 13.1 0.4 0.14 12.0 0.4 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat Bac_DNA_binding PF00216.21 ORF42859 - 0.053 13.7 0.1 0.099 12.9 0.1 1.4 1 0 0 1 1 1 0 Bacterial DNA-binding protein Thioredoxin PF00085.20 ORF42832 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF42832 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF42832 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF42832 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF42832 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF42832 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF42832 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF42832 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF42832 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF42832 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF42832 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF42832 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein zf-B_box PF00643.24 ORF42738 - 0.07 13.3 1.4 0.17 12.0 1.4 1.6 1 0 0 1 1 1 0 B-box zinc finger FYVE PF01363.21 ORF42738 - 2.8 8.1 10.3 3.1 8.0 9.7 1.4 1 1 0 1 1 1 0 FYVE zinc finger RPS31 PF17067.5 ORF42379 - 0.00082 19.5 3.4 0.0036 17.4 1.3 2.0 1 1 1 2 2 2 1 Ribosomal protein S31e ABC_tran PF00005.27 ORF38859 - 1.6e-09 38.4 0.0 2.7e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF38859 - 2.5e-07 30.4 0.2 3.1e-07 30.1 0.2 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain CRF-BP PF05428.11 ORF38859 - 0.013 14.3 0.0 0.014 14.2 0.0 1.1 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) DUF2087 PF09860.9 ORF38859 - 0.04 14.1 0.1 0.24 11.6 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2087) Pex14_N PF04695.13 ORF36931 - 0.26 11.9 3.1 0.31 11.7 3.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Spore_Cse60 PF10957.8 ORF36667 - 0.28 11.2 4.3 0.38 10.8 1.1 2.4 2 1 1 3 3 3 0 Sporulation protein Cse60 Coprogen_oxidas PF01218.18 ORF36667 - 0.39 9.4 1.7 0.47 9.1 1.7 1.3 1 1 0 1 1 1 0 Coproporphyrinogen III oxidase DUF4224 PF13986.6 ORF36208 - 0.18 11.7 2.0 0.24 11.3 0.0 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4224) DUF3876 PF12992.7 ORF33482 - 0.17 12.0 1.4 11 6.2 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3876) CF222 PF15661.5 ORF33200 - 0.021 13.7 9.9 0.032 13.1 9.7 1.4 1 1 0 1 1 1 0 C6orf222, uncharacterised family Bac_export_1 PF01311.20 ORF31547 - 0.035 13.7 1.3 0.052 13.1 1.3 1.3 1 0 0 1 1 1 0 Bacterial export proteins, family 1 zf-C2HE PF16278.5 ORF31008 - 0.043 14.3 0.1 0.071 13.6 0.1 1.4 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger PHD_3 PF13922.6 ORF31008 - 0.079 13.4 1.5 0.56 10.6 0.1 2.3 2 0 0 2 2 2 0 PHD domain of transcriptional enhancer, Asx Thioredoxin PF00085.20 ORF30842 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF30842 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF30842 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF30842 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF30842 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF30842 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF30842 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF30842 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF30842 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF30842 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF30842 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF30842 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein GP40 PF11025.8 ORF30651 - 2.5 7.8 13.3 4 7.2 2.8 2.1 1 1 1 2 2 2 0 Glycoprotein GP40 of Cryptosporidium Galactosyl_T PF01762.21 ORF29847 - 0.022 14.6 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Galactosyltransferase HTH_19 PF12844.7 ORF28713 - 0.00083 19.3 0.0 0.0016 18.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 ORF28713 - 0.0017 18.7 0.0 0.0025 18.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 ORF28713 - 0.019 14.8 0.0 0.035 14.0 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_3 PF01381.22 ORF28713 - 0.027 14.6 0.0 0.061 13.4 0.0 1.7 1 1 0 1 1 1 0 Helix-turn-helix HTH_37 PF13744.6 ORF28713 - 0.058 13.3 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain ICAM_N PF03921.14 ORF285 - 0.018 14.7 0.7 0.018 14.7 0.7 2.3 1 1 1 2 2 2 0 Intercellular adhesion molecule (ICAM), N-terminal domain TMEM173 PF15009.6 ORF285 - 0.74 8.9 2.4 0.86 8.7 2.4 1.0 1 0 0 1 1 1 0 Transmembrane protein 173 Ras PF00071.22 ORF27015 - 3.8e-10 39.6 0.1 5.3e-10 39.1 0.1 1.2 1 0 0 1 1 1 1 Ras family TraG-D_C PF12696.7 ORF27015 - 0.13 12.2 1.6 0.45 10.5 1.6 1.7 1 1 0 1 1 1 0 TraM recognition site of TraD and TraG RBP_receptor PF14752.6 ORF26166 - 0.0058 15.3 0.5 0.0071 15.0 0.5 1.1 1 0 0 1 1 1 1 Retinol binding protein receptor UXS1_N PF11803.8 ORF2607 - 0.11 12.9 0.1 0.22 11.9 0.1 1.6 1 1 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal DUF4636 PF15468.6 ORF23706 - 0.12 12.1 1.4 0.34 10.6 0.5 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4636) Involucrin_N PF10583.9 ORF20687 - 0.17 12.5 0.4 0.17 12.5 0.4 1.6 2 0 0 2 2 2 0 Involucrin of squamous epithelia N-terminus SMC_N PF02463.19 ORF2060 - 0.00075 19.0 0.2 0.00075 19.0 0.2 1.9 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain CDC45 PF02724.14 ORF2060 - 0.034 12.5 8.2 0.032 12.5 8.2 1.1 1 0 0 1 1 1 0 CDC45-like protein EMC3_TMCO1 PF01956.16 ORF2060 - 1.2 8.8 7.6 1.6 8.4 7.6 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Presenilin PF01080.17 ORF2060 - 3.6 6.3 6.3 3.2 6.4 6.3 1.1 1 0 0 1 1 1 0 Presenilin DUF4407 PF14362.6 ORF2060 - 9.6 5.4 11.5 11 5.3 11.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AZUL PF16558.5 ORF19398 - 0.1 12.8 3.9 0.37 11.0 0.1 2.3 2 0 0 2 2 2 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A DUF2628 PF10947.8 ORF1890 - 0.01 16.2 0.0 0.01 16.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) 12TM_1 PF09847.9 ORF1890 - 0.019 14.1 0.7 0.024 13.7 0.7 1.0 1 0 0 1 1 1 0 Membrane protein of 12 TMs FixP_N PF14715.6 ORF1890 - 0.38 10.5 1.4 0.54 10.0 1.4 1.2 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP SWIRM-assoc_2 PF16496.5 ORF17498 - 0.029 13.2 0.2 0.034 13.0 0.2 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal Ank_5 PF13857.6 ORF16492 - 1.6e-05 25.1 0.0 2.4e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF16492 - 0.0029 18.0 0.0 0.0069 16.8 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeat Ank_4 PF13637.6 ORF16492 - 0.011 16.3 0.1 0.73 10.5 0.0 2.0 1 1 2 3 3 3 0 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF16492 - 0.016 15.8 0.0 0.02 15.5 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank PF00023.30 ORF16492 - 0.21 12.1 0.0 0.39 11.2 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeat DUF4636 PF15468.6 ORF16446 - 0.12 12.1 1.4 0.34 10.6 0.5 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4636) cwf18 PF08315.12 ORF15839 - 2.8e-24 86.3 6.7 3.1e-24 86.2 6.7 1.1 1 0 0 1 1 1 1 cwf18 pre-mRNA splicing factor Nif11 PF07862.11 ORF15839 - 0.0062 16.8 2.5 0.065 13.6 0.3 2.4 2 0 0 2 2 2 1 Nif11 domain Myb_DNA-binding PF00249.31 ORF15688 - 0.11 12.7 1.7 0.23 11.7 1.7 1.7 1 1 0 1 1 1 0 Myb-like DNA-binding domain zf-RING_2 PF13639.6 ORF149828 - 2.7e-11 43.6 5.6 3.8e-11 43.1 5.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF149828 - 8.7e-11 41.4 3.7 1.6e-10 40.5 3.7 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF149828 - 1.1e-07 31.5 4.9 1.7e-07 31.0 4.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF149828 - 1.6e-07 31.1 5.2 2.4e-07 30.5 5.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF149828 - 2.9e-07 30.4 4.0 4.9e-07 29.7 4.0 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF149828 - 3.9e-05 23.5 4.7 6.5e-05 22.8 4.7 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF149828 - 4.8e-05 22.9 2.8 7.8e-05 22.2 2.8 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF149828 - 6.1e-05 23.0 2.0 0.00011 22.2 2.0 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 ORF149828 - 0.0002 21.5 7.9 0.0011 19.2 7.9 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_6 PF14835.6 ORF149828 - 0.00098 19.0 0.8 0.0015 18.3 0.8 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein Prok-RING_4 PF14447.6 ORF149828 - 0.0029 17.4 6.3 0.007 16.2 6.2 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF149828 - 0.003 17.4 3.5 0.0049 16.7 3.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF149828 - 0.0045 17.1 3.8 0.011 15.9 3.8 1.6 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_1 PF14446.6 ORF149828 - 0.0059 16.5 1.8 0.069 13.1 0.3 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-HC5HC2H_2 PF13832.6 ORF149828 - 0.012 15.8 0.6 0.012 15.8 0.6 1.8 1 1 0 2 2 2 0 PHD-zinc-finger like domain zf-Nse PF11789.8 ORF149828 - 0.028 14.2 3.5 0.044 13.6 3.5 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-UDP PF14569.6 ORF149828 - 0.035 14.2 1.2 0.056 13.6 1.2 1.3 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-RING-like PF08746.11 ORF149828 - 0.18 12.2 5.4 0.36 11.2 5.4 1.6 1 1 0 1 1 1 0 RING-like domain FANCL_C PF11793.8 ORF149828 - 0.34 11.1 4.6 3.4 7.9 4.6 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3H2C3 PF17122.5 ORF149828 - 3.8 7.6 7.8 32 4.7 7.8 2.2 1 1 0 1 1 1 0 Zinc-finger TetR_C_19 PF17924.1 ORF149722 - 0.18 12.4 11.0 0.33 11.5 11.0 1.5 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain PH_BEACH PF14844.6 ORF149722 - 0.32 11.1 6.0 0.34 11.0 1.4 2.1 1 1 1 2 2 2 0 PH domain associated with Beige/BEACH CHD5 PF04420.14 ORF149722 - 0.55 10.1 10.4 0.21 11.5 6.6 1.9 1 1 1 2 2 2 0 CHD5-like protein Hydin_ADK PF17213.3 ORF149722 - 0.89 9.8 5.9 1.1 9.5 5.9 1.0 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain IFT46_B_C PF12317.8 ORF149722 - 0.99 9.1 5.9 1.2 8.9 5.9 1.1 1 0 0 1 1 1 0 Intraflagellar transport complex B protein 46 C terminal MSC PF09402.10 ORF149722 - 1.5 8.2 11.7 1.6 8.1 11.7 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain Thioredoxin PF00085.20 ORF149635 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF149635 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF149635 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF149635 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF149635 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF149635 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF149635 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF149635 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF149635 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF149635 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF149635 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF149635 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein SUFU PF05076.13 ORF148313 - 0.16 12.0 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Suppressor of fused protein (SUFU) DUF3649 PF12365.8 ORF147628 - 2.2 8.1 8.2 5.2 6.9 5.3 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3649) FCD PF07729.12 ORF147191 - 4.5e-22 78.8 0.7 5.1e-22 78.6 0.7 1.0 1 0 0 1 1 1 1 FCD domain PSII_Pbs31 PF18240.1 ORF147191 - 0.022 15.2 0.0 2.7 8.5 0.0 2.1 2 0 0 2 2 2 0 Photosystem II Psb31 protein RNA_pol_Rpb4 PF03874.16 ORF147191 - 0.18 12.2 2.0 0.46 10.8 0.3 2.0 2 0 0 2 2 2 0 RNA polymerase Rpb4 DUF5544 PF17698.1 ORF147165 - 0.23 11.6 0.0 0.23 11.6 0.0 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5544) Mntp PF02659.15 ORF146869 - 0.062 13.1 2.8 0.081 12.7 2.8 1.1 1 0 0 1 1 1 0 Putative manganese efflux pump DUF3128 PF11326.8 ORF145269 - 2.2 8.7 10.0 0.27 11.6 5.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3128) DUF4501 PF14946.6 ORF145127 - 0.089 12.9 5.1 0.12 12.5 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) DUF2799 PF10973.8 ORF144892 - 0.017 15.5 2.4 0.027 14.9 2.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2799) Fmp27_SW PF10305.9 ORF144626 - 0.039 14.6 0.3 0.063 14.0 0.3 1.4 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Rrp44_CSD1 PF17216.3 ORF144626 - 0.1 12.3 0.5 0.13 12.0 0.5 1.2 1 0 0 1 1 1 0 Rrp44-like cold shock domain Cwf_Cwc_15 PF04889.12 ORF144626 - 0.12 12.1 6.0 0.14 11.8 6.0 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DUF962 PF06127.11 ORF144305 - 0.61 10.2 2.9 7.1 6.8 2.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF962) zf-CHY PF05495.12 ORF143962 - 3.3e-12 46.7 12.0 8.7e-12 45.4 12.0 1.6 1 0 0 1 1 1 1 CHY zinc finger Zn-ribbon_8 PF09723.10 ORF143962 - 0.0059 16.7 4.0 0.0059 16.7 4.0 2.2 2 0 0 2 2 2 1 Zinc ribbon domain C1_4 PF07975.12 ORF143962 - 0.11 12.7 10.3 0.53 10.6 10.3 2.1 1 1 1 2 2 2 0 TFIIH C1-like domain GP3_package PF16677.5 ORF143962 - 0.13 12.4 0.6 0.19 11.9 0.1 1.5 2 0 0 2 2 2 0 DNA-packaging protein gp3 SIR2 PF02146.17 ORF143962 - 0.18 11.7 2.1 0.27 11.2 2.0 1.3 1 1 0 1 1 1 0 Sir2 family RNA_POL_M_15KD PF02150.16 ORF143962 - 0.21 11.5 8.1 4.9 7.1 0.1 3.3 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit Cys_rich_KTR PF14205.6 ORF143962 - 0.55 10.1 5.4 6.3 6.7 2.3 2.5 1 1 1 2 2 2 0 Cysteine-rich KTR HypA PF01155.19 ORF143962 - 1.7 8.7 7.5 4.3 7.4 7.5 1.8 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Porin_8 PF16966.5 ORF143079 - 0.045 12.7 0.1 0.048 12.6 0.1 1.1 1 0 0 1 1 1 0 Porin-like glycoporin RafY KN_motif PF12075.8 ORF143079 - 0.31 10.9 2.5 0.62 9.9 0.4 2.1 1 1 1 2 2 2 0 KN motif DUF3963 PF13124.6 ORF142705 - 0.084 12.9 1.6 0.17 11.9 1.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3963) Fz PF01392.22 ORF142440 - 0.047 14.3 0.4 0.23 12.1 0.4 1.9 1 1 0 1 1 1 0 Fz domain EF-hand_1 PF00036.32 ORF142112 - 7.1e-06 25.2 0.0 0.14 11.8 0.1 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF142112 - 1.1e-05 25.8 0.0 0.065 13.7 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF142112 - 1.8e-05 24.3 0.1 0.15 12.1 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF142112 - 0.0024 17.7 0.3 0.26 11.2 0.0 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF142112 - 0.037 14.3 0.0 2.6 8.4 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 ORF142112 - 0.15 11.6 0.6 9.4 5.9 0.0 2.6 2 1 0 2 2 2 0 EF hand DUF5637 PF18687.1 ORF141582 - 1 9.4 12.4 0.2 11.6 3.1 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5637) EamA PF00892.20 ORF140625 - 2.3e-06 27.8 10.4 2.6e-06 27.7 10.4 1.1 1 0 0 1 1 1 1 EamA-like transporter family VIT PF08487.10 ORF140625 - 0.026 14.7 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Vault protein inter-alpha-trypsin domain DUF2371 PF10177.9 ORF140625 - 0.13 12.5 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) zf-Paramyx-P PF13008.7 ORF138659 - 0.65 9.5 7.6 0.78 9.2 4.5 2.3 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein TAP42 PF04177.12 ORF138566 - 0.093 11.8 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 TAP42-like family Phe_hydrox_dim PF07976.12 ORF137590 - 0.037 14.1 0.1 0.042 13.9 0.1 1.1 1 0 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain Retrotran_gag_3 PF14244.6 ORF137198 - 0.041 13.7 0.3 0.71 9.7 0.1 2.2 2 0 0 2 2 2 0 gag-polypeptide of LTR copia-type TEBP_beta PF07404.11 ORF137198 - 0.23 10.8 0.1 0.27 10.5 0.1 1.1 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) Plant_tran PF04827.14 ORF137174 - 0.016 14.8 1.3 0.018 14.6 1.3 1.1 1 0 0 1 1 1 0 Plant transposon protein KIAA1430 PF13879.6 ORF137134 - 4.6e-20 72.3 14.5 5.8e-20 72.0 14.5 1.1 1 0 0 1 1 1 1 KIAA1430 homologue DUF4065 PF13274.6 ORF137134 - 0.32 11.9 2.8 0.5 11.3 2.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) Ribosomal_L17 PF01196.19 ORF136932 - 1.1e-34 119.1 0.0 1.4e-34 118.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L17 Glyco_transf_15 PF01793.16 ORF136820 - 1e-12 48.0 0.1 1.1e-12 47.8 0.1 1.0 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase MORN PF02493.20 ORF1356 - 1.9e-07 30.6 20.6 0.00082 19.1 3.4 4.0 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 ORF1356 - 0.44 10.3 3.9 6.8 6.5 0.1 2.3 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain V4R PF02830.18 ORF133905 - 0.084 12.9 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 V4R domain ARL6IP6 PF15062.6 ORF133752 - 0.083 13.0 0.5 2.9 8.1 0.1 2.1 1 1 1 2 2 2 0 Haemopoietic lineage transmembrane helix bZIP_1 PF00170.21 ORF133605 - 9.1e-09 35.3 9.5 1.8e-08 34.3 9.5 1.5 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF133605 - 6.6e-07 29.3 11.1 6.6e-07 29.3 11.1 1.6 2 0 0 2 2 2 1 Basic region leucine zipper bZIP_Maf PF03131.17 ORF133605 - 0.001 19.5 8.9 0.0016 18.9 8.9 1.3 1 0 0 1 1 1 1 bZIP Maf transcription factor DUF4618 PF15397.6 ORF133605 - 0.0037 16.7 4.1 0.0048 16.4 4.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) FlaC_arch PF05377.11 ORF133605 - 0.0054 17.1 0.5 0.013 15.9 0.5 1.6 1 0 0 1 1 1 1 Flagella accessory protein C (FlaC) TMF_TATA_bd PF12325.8 ORF133605 - 0.0064 16.7 1.7 0.0064 16.7 1.7 1.6 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding DivIC PF04977.15 ORF133605 - 0.0083 15.9 4.7 0.016 14.9 4.6 1.6 1 1 0 1 1 1 1 Septum formation initiator IFT20 PF14931.6 ORF133605 - 0.021 15.0 4.9 0.03 14.5 4.9 1.4 1 0 0 1 1 1 0 Intraflagellar transport complex B, subunit 20 GIT_CC PF16559.5 ORF133605 - 0.025 14.4 2.4 0.047 13.6 2.4 1.4 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor TSC22 PF01166.18 ORF133605 - 0.027 14.8 1.0 0.062 13.6 1.0 1.6 1 0 0 1 1 1 0 TSC-22/dip/bun family Prominin PF05478.11 ORF133605 - 0.039 11.9 2.7 0.044 11.7 2.7 1.0 1 0 0 1 1 1 0 Prominin NRBF2 PF08961.10 ORF133605 - 0.041 13.5 1.9 0.053 13.1 1.9 1.2 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator Spc24 PF08286.11 ORF133605 - 0.13 12.5 3.8 0.12 12.6 2.7 1.6 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 Imm7 PF15585.6 ORF133605 - 0.18 12.1 0.8 0.28 11.5 0.2 1.6 1 1 0 1 1 1 0 Immunity protein 7 CCDC-167 PF15188.6 ORF133605 - 0.24 11.8 4.8 0.34 11.3 4.8 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 ZapB PF06005.12 ORF133605 - 0.25 11.8 6.9 0.51 10.8 6.9 1.8 1 1 0 1 1 1 0 Cell division protein ZapB FlxA PF14282.6 ORF133605 - 0.59 10.1 8.6 0.37 10.8 6.9 1.6 1 1 0 1 1 1 0 FlxA-like protein CASP_C PF08172.12 ORF133605 - 0.67 9.2 8.0 7.2 5.9 6.6 2.3 1 1 1 2 2 2 0 CASP C terminal Stc1 PF12898.7 ORF133512 - 0.14 12.7 7.2 0.21 12.2 1.1 2.5 2 1 0 2 2 2 0 Stc1 domain Tnp_zf-ribbon_2 PF13842.6 ORF133512 - 0.39 11.6 10.9 13 6.7 0.5 3.6 3 0 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon CBP_BcsF PF11120.8 ORF133512 - 2.7 8.2 6.0 3.5 7.8 0.1 2.9 3 0 0 3 3 3 0 Cellulose biosynthesis protein BcsF Pex14_N PF04695.13 ORF133511 - 0.26 11.9 3.1 0.31 11.7 3.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Neugrin PF06413.11 ORF133467 - 1.3 9.0 11.0 1.5 8.8 11.0 1.0 1 0 0 1 1 1 0 Neugrin Striatin PF08232.12 ORF133467 - 5 7.7 13.7 6.8 7.3 13.7 1.3 1 0 0 1 1 1 0 Striatin family Gamma-thionin PF00304.20 ORF133386 - 0.16 12.3 0.1 0.16 12.3 0.1 2.7 3 0 0 3 3 3 0 Gamma-thionin family Pro_isomerase PF00160.21 ORF132308 - 5.5e-36 124.2 0.3 5.9e-36 124.1 0.3 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ArfGap PF01412.18 ORF131939 - 1.3e-25 89.7 0.3 1.6e-25 89.5 0.3 1.1 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf NAPRTase_N PF17767.1 ORF131939 - 0.081 13.3 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Staygreen PF12638.7 ORF131939 - 0.097 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Staygreen protein His_Phos_1 PF00300.22 ORF131436 - 3.4e-05 23.6 0.0 6.2e-05 22.8 0.0 1.4 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) CitG PF01874.16 ORF131412 - 0.057 13.1 0.0 0.065 12.9 0.0 1.1 1 0 0 1 1 1 0 ATP:dephospho-CoA triphosphoribosyl transferase TrkA_TMD PF18613.1 ORF130942 - 0.065 12.7 0.1 0.12 11.8 0.1 1.3 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain Thioredoxin PF00085.20 ORF130479 - 1.5e-29 102.0 0.3 1.8e-29 101.8 0.3 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF130479 - 5.3e-08 32.8 0.1 6.8e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 AhpC/TSA family OST3_OST6 PF04756.13 ORF130479 - 9.8e-08 31.7 0.1 1.2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF130479 - 1.8e-07 31.6 0.2 3.3e-07 30.7 0.2 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF130479 - 1.1e-06 28.8 0.1 6.9e-06 26.3 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 ORF130479 - 6.7e-06 25.9 0.1 2.7e-05 23.9 0.1 1.7 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 ORF130479 - 2.8e-05 24.2 0.1 3.8e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like DIM1 PF02966.16 ORF130479 - 0.00033 20.4 0.0 0.00042 20.1 0.0 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF130479 - 0.018 14.8 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF130479 - 0.029 14.4 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE DUF953 PF06110.11 ORF130479 - 0.074 12.7 0.1 0.2 11.3 0.1 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) TraF PF13728.6 ORF130479 - 0.11 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein K_channel_TID PF07941.11 ORF130326 - 0.2 12.1 3.5 0.31 11.5 3.5 1.3 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain DUF1158 PF06643.11 ORF12983 - 0.017 15.6 0.4 0.017 15.6 0.4 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF1158) TMEM251 PF15190.6 ORF129172 - 0.0054 16.7 0.1 0.0066 16.4 0.1 1.1 1 0 0 1 1 1 1 Transmembrane protein 251 DAN PF03045.15 ORF129172 - 0.075 13.1 0.3 0.1 12.7 0.3 1.4 1 1 0 1 1 1 0 DAN domain Gly_radical PF01228.21 ORF12908 - 4.8e-22 78.5 0.1 8.5e-22 77.7 0.0 1.5 2 0 0 2 2 2 1 Glycine radical RVP_2 PF08284.11 ORF12890 - 0.1 12.4 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 Retroviral aspartyl protease DUF3737 PF12541.8 ORF12779 - 0.99 8.6 8.8 2.8 7.1 2.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3737) UXS1_N PF11803.8 ORF127614 - 0.11 12.9 0.1 0.22 11.9 0.1 1.6 1 1 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal DUF5544 PF17698.1 ORF126835 - 0.23 11.6 0.0 0.23 11.6 0.0 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5544) SgrT PF15894.5 ORF124351 - 0.063 13.3 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT Glycolipid_bind PF06475.11 ORF124351 - 0.1 12.1 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Putative glycolipid-binding zf-C2HE PF16278.5 ORF12298 - 0.042 14.3 0.1 0.071 13.6 0.1 1.4 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger PHD_3 PF13922.6 ORF12298 - 0.059 13.7 1.7 0.56 10.6 0.1 2.3 2 0 0 2 2 2 0 PHD domain of transcriptional enhancer, Asx PyrI_C PF02748.15 ORF120550 - 0.011 15.6 0.1 0.022 14.7 0.1 1.5 1 0 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain FXa_inhibition PF14670.6 ORF118680 - 0.037 14.3 0.4 5.4 7.4 0.0 2.6 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site UXS1_N PF11803.8 ORF117885 - 0.11 12.9 0.1 0.22 11.9 0.1 1.6 1 1 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal Ras PF00071.22 ORF117520 - 1.1e-17 64.1 0.2 1.3e-17 63.8 0.2 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF117520 - 5.1e-14 52.5 0.1 6.1e-14 52.3 0.1 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF117520 - 0.00052 19.5 0.1 0.00057 19.4 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF117520 - 0.0078 15.8 0.0 0.027 14.0 0.0 1.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Fimbrial PF00419.20 ORF117249 - 7.9e-21 74.9 0.1 8.6e-21 74.8 0.1 1.0 1 0 0 1 1 1 1 Fimbrial protein FGFR3_TM PF18123.1 ORF116236 - 1.1 8.9 11.8 1.8 8.2 1.8 2.5 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain EphA2_TM PF14575.6 ORF116236 - 1.4 9.8 4.1 15 6.5 0.2 2.9 3 0 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain EF-hand_1 PF00036.32 ORF11600 - 0.0018 17.7 0.4 0.0048 16.4 0.4 1.8 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF11600 - 0.054 13.5 0.7 0.23 11.5 0.1 2.2 2 0 0 2 2 2 0 EF-hand domain DUF2304 PF10066.9 ORF115404 - 0.0027 17.9 4.5 0.0039 17.4 4.5 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2304) DUF5373 PF17343.2 ORF115404 - 0.017 15.0 6.5 0.019 14.8 6.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5373) DUF2070 PF09843.9 ORF115404 - 0.87 7.8 8.0 0.88 7.8 8.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Adeno_52K PF03052.15 ORF11521 - 0.1 12.0 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa Thioredoxin PF00085.20 ORF113137 - 2.7e-07 30.5 0.1 3.5e-07 30.2 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 ORF113137 - 0.034 14.3 0.1 0.073 13.3 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like Laminin_G_1 PF00054.23 ORF113002 - 0.15 12.3 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 Laminin G domain DAP10 PF07213.11 ORF112915 - 4.6 7.3 9.4 6 6.9 1.6 2.2 1 1 1 2 2 2 0 DAP10 membrane protein Galactosyl_T PF01762.21 ORF112407 - 0.022 14.6 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Galactosyltransferase DUF1547 PF07577.11 ORF111710 - 0.0039 17.6 0.0 0.0057 17.0 0.0 1.3 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1547) DUF3226 PF11536.8 ORF111710 - 0.015 15.0 0.1 0.022 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3226) DUF359 PF04019.12 ORF111710 - 0.21 11.2 0.7 0.26 10.9 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF359) cwf18 PF08315.12 ORF11084 - 2.8e-24 86.3 6.7 3.1e-24 86.2 6.7 1.1 1 0 0 1 1 1 1 cwf18 pre-mRNA splicing factor Nif11 PF07862.11 ORF11084 - 0.0062 16.8 2.5 0.065 13.6 0.3 2.4 2 0 0 2 2 2 1 Nif11 domain Vps54 PF07928.12 ORF110217 - 0.12 12.8 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 Vps54-like protein RTX_C PF08339.10 ORF109428 - 0.0034 17.5 0.4 0.0044 17.1 0.4 1.2 1 0 0 1 1 1 1 RTX C-terminal domain Peptidase_C101 PF16218.5 ORF109428 - 0.007 15.7 1.0 0.0082 15.4 1.0 1.1 1 0 0 1 1 1 1 Peptidase family C101 Glyco_hydro38C2 PF17677.1 ORF108078 - 1.5e-09 37.8 0.0 2.2e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain TMEM144 PF07857.12 ORF106797 - 6e-15 55.0 2.7 6.8e-15 54.9 2.7 1.0 1 0 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Sugar_transport PF06800.12 ORF106797 - 7.8e-08 32.0 3.4 9.8e-08 31.7 3.4 1.2 1 0 0 1 1 1 1 Sugar transport protein Multi_Drug_Res PF00893.19 ORF106797 - 0.011 16.3 4.2 0.012 16.2 2.9 1.8 1 1 0 1 1 1 0 Small Multidrug Resistance protein MatE PF01554.18 ORF106619 - 0.094 12.4 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 MatE zf-CCCH_8 PF18633.1 ORF10653 - 0.38 10.9 2.0 3 8.0 1.1 2.5 3 0 0 3 3 3 0 Zinc-finger antiviral protein (ZAP) zinc finger domain 3 Kelch_1 PF01344.25 ORF106420 - 9.5e-07 28.3 0.9 0.001 18.6 0.1 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF106420 - 0.011 15.9 0.2 0.11 12.8 0.1 2.1 2 0 0 2 2 2 0 Kelch motif DUF3336 PF11815.8 ORF106420 - 0.11 12.2 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3336) Lipocalin_7 PF14651.6 ORF10624 - 0.007 16.3 0.7 0.007 16.3 0.7 1.6 2 0 0 2 2 2 1 Lipocalin / cytosolic fatty-acid binding protein family NOA36 PF06524.12 ORF10624 - 1.2 8.3 13.7 1.3 8.3 13.7 1.1 1 0 0 1 1 1 0 NOA36 protein Abhydrolase_6 PF12697.7 ORF106081 - 0.08 13.5 0.3 0.087 13.4 0.3 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family SID-1_RNA_chan PF13965.6 ORF105953 - 4.9e-11 41.8 2.0 5.4e-11 41.6 2.0 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 BenE PF03594.13 ORF105896 - 4.8e-27 94.7 4.4 5.7e-27 94.5 4.4 1.1 1 0 0 1 1 1 1 Benzoate membrane transport protein BPD_transp_1 PF00528.22 ORF105896 - 0.041 13.6 0.4 0.053 13.2 0.4 1.1 1 0 0 1 1 1 0 Binding-protein-dependent transport system inner membrane component Spc7_N PF15402.6 ORF105101 - 5.1 5.2 11.2 5.6 5.1 11.2 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 ANAPC1 PF12859.7 ORF104867 - 0.023 15.3 0.2 0.027 15.0 0.2 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 ShlB PF03865.13 ORF104867 - 0.079 12.4 0.7 0.099 12.1 0.7 1.1 1 0 0 1 1 1 0 Haemolysin secretion/activation protein ShlB/FhaC/HecB MAP PF03642.13 ORF104127 - 0.3 11.4 6.7 0.54 10.6 2.9 2.7 1 1 0 2 2 2 0 MAP domain EF-hand_6 PF13405.6 ORF100933 - 0.0061 16.4 0.0 0.013 15.3 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF100933 - 0.011 15.2 0.0 0.018 14.6 0.0 1.4 1 0 0 1 1 1 0 EF hand PhdYeFM_antitox PF02604.19 ORF100933 - 0.18 11.7 0.1 0.24 11.2 0.1 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Ada_Zn_binding PF02805.16 NODE_49553_length_376_cov_1.724340_g41662_i0reverse_frame_1 - 0.04 13.9 0.9 0.096 12.7 0.9 1.6 1 0 0 1 1 1 0 Metal binding domain of Ada EMC3_TMCO1 PF01956.16 NODE_49550_length_376_cov_1.950147_g41659_i0forward_frame_1 - 3 7.5 7.5 0.31 10.7 3.4 1.6 2 1 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like BPD_transp_1 PF00528.22 NODE_49545_length_376_cov_2.249267_g41654_i0forward_frame_1 - 3e-16 59.7 8.0 3.6e-16 59.4 8.0 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CHU_C PF13585.6 NODE_49544_length_376_cov_2.258065_g41653_i0reverse_frame_1 - 0.06 13.4 0.0 0.12 12.4 0.0 1.5 1 1 1 2 2 2 0 C-terminal domain of CHU protein family Trm112p PF03966.16 NODE_49538_length_376_cov_2.894428_g41647_i0reverse_frame_1 - 0.019 15.5 0.0 0.03 14.9 0.0 1.4 1 0 0 1 1 1 0 Trm112p-like protein CRAL_TRIO PF00650.20 NODE_49536_length_376_cov_3.243402_g41645_i0forward_frame_1 - 7.9e-18 64.7 0.1 9.8e-18 64.4 0.1 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 NODE_49536_length_376_cov_3.243402_g41645_i0forward_frame_1 - 0.061 13.5 0.1 0.077 13.2 0.1 1.2 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain HP0268 PF18618.1 NODE_49534_length_376_cov_3.489736_g41643_i0forward_frame_1 - 0.067 13.6 0.1 0.11 12.9 0.1 1.3 1 0 0 1 1 1 0 HP0268 DUF5553 PF17707.1 NODE_49533_length_376_cov_3.744868_g41642_i0forward_frame_1 - 2.3 7.6 6.7 0.14 11.6 1.1 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5553) Herpes_glycoH_C PF17488.2 NODE_49528_length_376_cov_10.982405_g41637_i0forward_frame_1 - 0.097 12.5 1.1 0.15 11.8 1.1 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein H C-terminal domain Connexin PF00029.19 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 0.1 12.3 4.2 0.13 12.0 4.2 1.2 1 0 0 1 1 1 0 Connexin CobT PF06213.12 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 1 8.7 9.5 1.2 8.5 9.5 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT RNA_pol_Rpc4 PF05132.14 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 1.4 9.3 9.1 1.5 9.2 9.1 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 Med19 PF10278.9 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 3.6 7.5 24.7 4.7 7.1 24.7 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF3438 PF11920.8 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 4.3 6.5 5.1 5 6.3 5.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) Zip PF02535.22 NODE_49521_length_376_cov_62.055718_g41630_i0forward_frame_1 - 7.8 5.6 7.4 9.2 5.4 7.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Macro_2 PF14519.6 NODE_49516_length_376_cov_68.903226_g41625_i0reverse_frame_1 - 0.0046 16.3 0.4 0.0047 16.3 0.4 1.1 1 0 0 1 1 1 1 Macro-like domain Rrp40_N PF18311.1 NODE_49514_length_376_cov_73.395894_g41623_i0forward_frame_1 - 0.084 12.8 0.1 0.21 11.6 0.1 1.8 1 0 0 1 1 1 0 Exosome complex exonuclease Rrp40 N-terminal domain Rhodanese_C PF12368.8 NODE_49510_length_376_cov_85.782991_g41619_i0reverse_frame_1 - 0.062 13.7 2.6 0.11 12.9 2.5 1.6 1 1 0 1 1 1 0 Rhodanase C-terminal Prok-RING_2 PF14445.6 NODE_49510_length_376_cov_85.782991_g41619_i0reverse_frame_1 - 0.065 13.4 4.2 0.13 12.4 4.2 1.6 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 TNT PF14021.6 NODE_49509_length_376_cov_85.876833_g41618_i0forward_frame_1 - 0.08 13.5 0.0 0.14 12.8 0.0 1.3 1 0 0 1 1 1 0 Tuberculosis necrotizing toxin THEG PF14912.6 NODE_49503_length_376_cov_95.976540_g41612_i0reverse_frame_1 - 0.15 12.6 3.2 0.5 10.9 3.2 2.0 1 1 0 1 1 1 0 Testicular haploid expressed repeat GSK-3_bind PF05350.12 NODE_49498_length_376_cov_159.982405_g41607_i0forward_frame_1 - 0.14 11.4 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding Orthopox_A5L PF06193.11 NODE_49480_length_377_cov_1.766082_g41590_i0reverse_frame_1 - 0.33 10.3 4.1 0.37 10.2 4.1 1.2 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like Aldedh PF00171.22 NODE_49468_length_377_cov_2.400585_g41578_i0forward_frame_1 - 1.9e-31 109.1 0.0 2e-31 109.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DnaJ PF00226.31 NODE_49458_length_377_cov_3.307018_g41568_i0reverse_frame_1 - 5.8e-07 29.6 0.0 1.2e-05 25.3 0.0 2.3 1 1 0 1 1 1 1 DnaJ domain GPAT_N PF14829.6 NODE_49458_length_377_cov_3.307018_g41568_i0reverse_frame_1 - 0.011 15.7 0.1 0.032 14.2 0.0 1.8 2 0 0 2 2 2 0 Glycerol-3-phosphate acyltransferase N-terminal HMG_box PF00505.19 NODE_49454_length_377_cov_5.777778_g41564_i0reverse_frame_1 - 0.087 13.2 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 HMG (high mobility group) box L27_2 PF09045.10 NODE_49453_length_377_cov_36.637427_g41563_i0reverse_frame_1 - 0.058 13.4 1.6 0.68 9.9 0.1 2.3 2 0 0 2 2 2 0 L27_2 Toxin_18 PF08087.11 NODE_49453_length_377_cov_36.637427_g41563_i0reverse_frame_1 - 1.5 8.8 4.8 7 6.7 0.1 2.3 2 0 0 2 2 2 0 Conotoxin O-superfamily MORN PF02493.20 NODE_49448_length_377_cov_56.900585_g41558_i0reverse_frame_1 - 6e-06 25.8 3.1 0.0029 17.4 0.9 2.5 2 0 0 2 2 2 2 MORN repeat DUF2809 PF10990.8 NODE_49448_length_377_cov_56.900585_g41558_i0forward_frame_1 - 0.081 13.6 4.1 1.9 9.2 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2809) WD40 PF00400.32 NODE_49445_length_377_cov_72.002924_g41555_i0reverse_frame_1 - 3.1e-10 40.5 0.0 0.0002 22.1 0.0 2.4 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_49445_length_377_cov_72.002924_g41555_i0reverse_frame_1 - 0.0069 16.7 0.0 0.07 13.4 0.0 2.1 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain DUF1133 PF06576.11 NODE_49445_length_377_cov_72.002924_g41555_i0forward_frame_1 - 0.071 12.5 0.0 0.085 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1133) TLD PF07534.16 NODE_49439_length_377_cov_84.497076_g41549_i0forward_frame_1 - 5.7e-09 36.3 0.0 7.6e-09 35.9 0.0 1.2 1 0 0 1 1 1 1 TLD UBA_6 PF18039.1 NODE_49432_length_377_cov_134.508772_g41542_i0forward_frame_1 - 0.22 11.5 0.0 0.33 10.9 0.0 1.2 1 0 0 1 1 1 0 UBA-like domain SR-25 PF10500.9 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 4.4e-06 26.5 72.7 8e-06 25.6 72.7 1.4 1 1 0 1 1 1 1 Nuclear RNA-splicing-associated protein Chorion_2 PF03964.15 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 0.005 17.6 8.7 0.006 17.4 8.7 1.2 1 0 0 1 1 1 1 Chorion family 2 DUF4604 PF15377.6 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 0.21 12.0 45.8 0.35 11.3 45.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) DUF3446 PF11928.8 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 1.5 9.2 21.4 2.7 8.3 21.4 1.4 1 0 0 1 1 1 0 Early growth response N-terminal domain SSP160 PF06933.11 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 1.5 6.9 9.5 1.7 6.8 9.5 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 MID_MedPIWI PF18296.1 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 3.8 7.2 17.2 5 6.8 17.2 1.3 1 0 0 1 1 1 0 MID domain of medPIWI PARM PF17061.5 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 3.8 7.6 16.5 4.8 7.2 16.5 1.2 1 0 0 1 1 1 0 PARM SLC12 PF03522.15 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 7.1 5.5 28.1 7.9 5.4 28.1 1.0 1 0 0 1 1 1 0 Solute carrier family 12 Velvet PF11754.8 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 7.1 6.5 18.3 8.5 6.2 18.3 1.2 1 0 0 1 1 1 0 Velvet factor DUF572 PF04502.13 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 8.5 5.9 35.4 9.8 5.7 35.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF572) DUF3827 PF12877.7 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_1 - 9.2 4.5 29.6 11 4.3 29.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Gag_p10 PF02337.17 NODE_49423_length_377_cov_376.792398_g41533_i0forward_frame_1 - 0.072 13.0 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Retroviral GAG p10 protein SCO1-SenC PF02630.14 NODE_49423_length_377_cov_376.792398_g41533_i0forward_frame_1 - 0.19 11.6 2.7 0.26 11.2 2.7 1.2 1 0 0 1 1 1 0 SCO1/SenC O_anti_polymase PF01901.16 NODE_49421_length_377_cov_395.283626_g41531_i0reverse_frame_1 - 1.8 7.7 8.9 2.2 7.5 8.9 1.1 1 0 0 1 1 1 0 Putative O-antigen polymerase HEAT PF02985.22 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 8.3e-11 41.2 0.0 0.036 14.3 0.0 3.4 3 0 0 3 3 3 3 HEAT repeat HEAT_2 PF13646.6 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 9.9e-09 35.5 0.0 3.4e-05 24.1 0.0 2.0 1 1 1 2 2 2 2 HEAT repeats Vac14_Fab1_bd PF12755.7 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 1.3e-07 32.1 0.2 0.0052 17.3 0.0 2.1 1 1 1 2 2 2 2 Vacuolar 14 Fab1-binding region CLASP_N PF12348.8 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 6e-05 22.7 0.2 7.3e-05 22.4 0.2 1.0 1 0 0 1 1 1 1 CLASP N terminal Cnd1 PF12717.7 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 0.00027 21.0 0.2 0.00093 19.3 0.1 1.8 1 1 1 2 2 2 1 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 0.0003 19.5 0.7 0.43 9.1 0.0 2.0 1 1 0 2 2 2 2 Adaptin N terminal region Tti2 PF10521.9 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 0.052 13.1 0.1 0.13 11.8 0.0 1.6 1 1 0 1 1 1 0 Tti2 family V-ATPase_H_C PF11698.8 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 0.059 13.5 0.7 9.4 6.4 0.2 2.1 1 1 0 2 2 2 0 V-ATPase subunit H HEAT_EZ PF13513.6 NODE_49405_length_378_cov_1.787172_g41518_i0reverse_frame_1 - 0.21 12.1 0.0 6.7 7.3 0.0 2.5 2 1 0 2 2 2 0 HEAT-like repeat GIT_CC PF16559.5 NODE_49402_length_378_cov_2.212828_g41515_i0forward_frame_1 - 0.036 13.9 0.5 0.069 13.0 0.5 1.5 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor DotA PF11388.8 NODE_49402_length_378_cov_2.212828_g41515_i0forward_frame_1 - 0.069 13.4 0.1 0.18 12.0 0.1 1.7 1 1 0 1 1 1 0 Phagosome trafficking protein DotA DUF2205 PF10224.9 NODE_49402_length_378_cov_2.212828_g41515_i0forward_frame_1 - 0.076 13.0 1.2 0.3 11.1 0.4 2.0 2 0 0 2 2 2 0 Short coiled-coil protein TAXi_N PF14543.6 NODE_49392_length_378_cov_2.737609_g41505_i0forward_frame_1 - 0.17 12.1 8.6 0.21 11.8 8.6 1.1 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal Ion_trans_2 PF07885.16 NODE_49387_length_378_cov_3.612245_g41500_i0forward_frame_1 - 3.5e-10 39.7 13.3 1e-09 38.2 12.9 1.9 1 1 0 1 1 1 1 Ion channel Ion_trans PF00520.31 NODE_49387_length_378_cov_3.612245_g41500_i0forward_frame_1 - 5.7e-05 22.5 7.9 9.1e-05 21.8 7.9 1.3 1 1 0 1 1 1 1 Ion transport protein FoP_duplication PF13865.6 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_1 - 7.1 7.3 16.6 10 6.8 16.6 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 E7 PF00527.18 NODE_49376_length_378_cov_58.612245_g41489_i0reverse_frame_1 - 0.13 12.5 1.1 0.65 10.2 0.7 2.0 2 0 0 2 2 2 0 E7 protein, Early protein OAD_beta PF03977.13 NODE_49369_length_378_cov_74.355685_g41482_i0forward_frame_1 - 0.017 14.1 0.2 0.019 14.0 0.2 1.1 1 0 0 1 1 1 0 Na+-transporting oxaloacetate decarboxylase beta subunit OTT_1508_deam PF14441.6 NODE_49353_length_378_cov_118.760933_g41466_i0forward_frame_1 - 0.015 15.3 0.3 0.022 14.8 0.3 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase DSPc PF00782.20 NODE_49343_length_378_cov_248.037901_g41456_i0reverse_frame_1 - 3.3e-15 56.1 0.0 5.2e-15 55.4 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_49343_length_378_cov_248.037901_g41456_i0reverse_frame_1 - 0.007 16.0 0.0 0.0088 15.6 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase oligo_HPY PF08352.12 NODE_49336_length_378_cov_8888.685131_g41449_i0reverse_frame_1 - 7.1 7.2 6.2 14 6.3 4.8 2.6 1 1 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region Fer4_21 PF14697.6 NODE_49331_length_379_cov_1.688953_g41444_i0forward_frame_2 - 4.6 7.5 10.0 0.16 12.1 2.8 2.0 2 0 0 2 2 2 0 4Fe-4S dicluster domain Endotoxin_N PF03945.14 NODE_49327_length_379_cov_2.212209_g41440_i0reverse_frame_3 - 0.087 12.5 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain ABC_tran PF00005.27 NODE_49327_length_379_cov_2.212209_g41440_i0forward_frame_3 - 1.1e-06 29.2 0.1 1.4e-06 28.8 0.1 1.1 1 0 0 1 1 1 1 ABC transporter RELT PF12606.8 NODE_49325_length_379_cov_2.284884_g41438_i0reverse_frame_2 - 0.11 11.5 5.6 0.35 9.9 5.6 1.9 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 DUF4006 PF13179.6 NODE_49325_length_379_cov_2.284884_g41438_i0reverse_frame_2 - 2.8 7.9 6.4 2.2 8.2 4.4 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF4006) TP2 PF01254.18 NODE_49324_length_379_cov_2.322674_g41437_i0reverse_frame_2 - 0.00047 20.8 0.3 0.00059 20.5 0.3 1.1 1 0 0 1 1 1 1 Nuclear transition protein 2 Herpes_LMP2 PF07415.11 NODE_49324_length_379_cov_2.322674_g41437_i0reverse_frame_2 - 0.087 11.6 0.8 0.096 11.4 0.8 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein DUF1858 PF08984.11 NODE_49324_length_379_cov_2.322674_g41437_i0forward_frame_2 - 0.21 11.8 0.0 0.3 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1858) UL45 PF05473.12 NODE_49323_length_379_cov_2.377907_g41436_i0reverse_frame_2 - 0.02 14.5 1.3 0.026 14.2 1.3 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like Pkinase PF00069.25 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 1.9e-37 129.1 0.0 2e-37 129.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 1.2e-19 70.6 0.0 1.3e-19 70.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 1.4e-05 24.6 0.0 1.8e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 0.096 11.6 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 NODE_49318_length_379_cov_2.523256_g41431_i0forward_frame_2 - 0.17 11.2 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family SSP160 PF06933.11 NODE_49315_length_379_cov_2.953488_g41428_i0reverse_frame_3 - 0.078 11.2 0.3 0.11 10.7 0.3 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 EF-hand_6 PF13405.6 NODE_49314_length_379_cov_3.026163_g41427_i0reverse_frame_2 - 0.14 12.2 0.2 8.8 6.5 0.0 2.3 2 0 0 2 2 2 0 EF-hand domain DHHC PF01529.20 NODE_49314_length_379_cov_3.026163_g41427_i0forward_frame_2 - 3.3 7.8 7.8 2 8.5 5.8 1.7 1 1 1 2 2 2 0 DHHC palmitoyltransferase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks207.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks207.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks207.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks207.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3915 PF13054.6 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_3 - 0.043 13.8 0.1 0.058 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF3915 PF13054.6 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_2 - 0.056 13.4 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) FAM27 PF15832.5 NODE_49312_length_379_cov_3.244186_g41425_i0forward_frame_2 - 0.097 13.2 6.3 0.097 13.2 6.3 3.1 3 1 0 3 3 3 0 FAM27 D and E protein family Pkinase PF00069.25 NODE_49308_length_379_cov_6.537791_g41421_i0reverse_frame_3 - 0.023 14.1 0.1 0.034 13.5 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain DUF2407_C PF13373.6 NODE_49304_length_379_cov_52.026163_g41417_i0forward_frame_2 - 2 8.6 6.9 3 8.0 1.4 2.0 1 1 1 2 2 2 0 DUF2407 C-terminal domain 2OG-FeII_Oxy_3 PF13640.6 NODE_49298_length_379_cov_74.912791_g41411_i0reverse_frame_2 - 0.00013 22.8 0.0 0.0002 22.2 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily AARP2CN PF08142.12 NODE_49298_length_379_cov_74.912791_g41411_i0forward_frame_3 - 0.071 13.2 0.0 0.091 12.9 0.0 1.2 1 0 0 1 1 1 0 AARP2CN (NUC121) domain Papo_T_antigen PF02380.15 NODE_49298_length_379_cov_74.912791_g41411_i0forward_frame_2 - 0.0068 16.5 0.4 0.01 15.9 0.4 1.3 1 0 0 1 1 1 1 T-antigen specific domain Torus PF16131.5 NODE_49291_length_379_cov_99.700581_g41404_i0reverse_frame_2 - 0.0003 21.5 3.6 0.00054 20.6 3.6 1.5 1 0 0 1 1 1 1 Torus domain zf_CCCH_4 PF18345.1 NODE_49291_length_379_cov_99.700581_g41404_i0reverse_frame_2 - 0.00075 19.5 10.1 0.0029 17.6 10.1 2.1 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 NODE_49291_length_379_cov_99.700581_g41404_i0reverse_frame_2 - 0.0022 17.7 6.7 0.0022 17.7 6.7 2.0 2 0 0 2 2 2 1 CCCH-type zinc finger zf-CCCH PF00642.24 NODE_49291_length_379_cov_99.700581_g41404_i0reverse_frame_2 - 0.0096 15.8 5.3 0.038 13.9 5.3 2.1 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) DUF5549 PF17703.1 NODE_49283_length_379_cov_134.174419_g41396_i0forward_frame_3 - 0.06 13.0 8.5 0.074 12.7 8.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) Paf1 PF03985.13 NODE_49283_length_379_cov_134.174419_g41396_i0forward_frame_2 - 0.3 10.0 7.9 0.38 9.7 7.9 1.0 1 0 0 1 1 1 0 Paf1 DUF1509 PF07420.11 NODE_49283_length_379_cov_134.174419_g41396_i0forward_frame_2 - 0.86 8.5 9.2 0.88 8.5 9.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) CDC45 PF02724.14 NODE_49283_length_379_cov_134.174419_g41396_i0forward_frame_2 - 4.6 5.4 11.0 4.5 5.4 11.0 1.0 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 NODE_49283_length_379_cov_134.174419_g41396_i0forward_frame_2 - 7.6 6.3 7.5 7.9 6.2 7.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Auts2 PF15336.6 NODE_49283_length_379_cov_134.174419_g41396_i0forward_frame_2 - 9.6 6.3 13.6 13 5.9 13.6 1.2 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein GRDP-like PF07173.12 NODE_49281_length_379_cov_172.604651_g41394_i0reverse_frame_3 - 0.0085 16.7 0.0 0.012 16.3 0.0 1.3 1 0 0 1 1 1 1 Glycine-rich domain-containing protein-like Hanta_G1 PF01567.16 NODE_49281_length_379_cov_172.604651_g41394_i0forward_frame_2 - 0.012 14.3 0.5 0.013 14.2 0.5 1.1 1 0 0 1 1 1 0 Hantavirus glycoprotein G1 Metallothio_5 PF02067.15 NODE_49276_length_379_cov_214.063953_g41389_i0forward_frame_3 - 8.8 6.5 17.0 1.2 9.3 12.4 2.0 2 1 0 2 2 2 0 Metallothionein family 5 Herpes_UL92 PF03048.14 NODE_49275_length_379_cov_248.345930_g41388_i0forward_frame_2 - 1.7 8.4 9.1 5.2 6.8 1.9 2.2 1 1 0 2 2 2 0 UL92 family BIR PF00653.21 NODE_49274_length_379_cov_255.206395_g41387_i0forward_frame_3 - 0.06 14.0 1.1 0.06 14.0 1.1 2.0 1 1 0 2 2 2 0 Inhibitor of Apoptosis domain APT PF03440.14 NODE_49273_length_379_cov_260.770349_g41386_i0forward_frame_3 - 0.0036 17.2 0.0 0.0055 16.6 0.0 1.2 1 0 0 1 1 1 1 Aerolysin/Pertussis toxin (APT) domain DUF2475 PF10629.9 NODE_49266_length_379_cov_881.764535_g41380_i0forward_frame_3 - 7.4e-08 32.5 3.4 6.2e-05 23.1 0.6 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF2475) zn-ribbon_14 PF16503.5 NODE_49263_length_379_cov_1375.720930_g41377_i0reverse_frame_2 - 0.088 12.3 0.3 0.088 12.3 0.3 2.4 2 0 0 2 2 2 0 Zinc-ribbon Tagatose_6_P_K PF08013.11 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 0.043 12.5 0.2 0.053 12.2 0.2 1.1 1 0 0 1 1 1 0 Tagatose 6 phosphate kinase CDC45 PF02724.14 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 0.29 9.4 10.0 0.27 9.5 10.0 1.0 1 0 0 1 1 1 0 CDC45-like protein Pox_Ag35 PF03286.14 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 0.61 9.8 11.3 0.68 9.7 11.3 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF2828 PF11443.8 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 0.9 7.6 7.6 0.97 7.4 7.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) HSP70 PF00012.20 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 1.3 7.1 10.0 1.3 7.1 10.0 1.1 1 0 0 1 1 1 0 Hsp70 protein Sec62 PF03839.16 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 1.6 8.2 8.0 1.6 8.2 8.0 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Connexin PF00029.19 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 2.2 8.0 6.6 2.9 7.6 6.6 1.2 1 0 0 1 1 1 0 Connexin FancD2 PF14631.6 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 2.9 5.2 8.0 3 5.1 8.0 1.0 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease DUF4337 PF14235.6 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 3.6 7.7 7.8 4.2 7.5 7.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Presenilin PF01080.17 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 3.6 6.2 6.8 3.8 6.2 6.8 1.1 1 0 0 1 1 1 0 Presenilin MDM10 PF12519.8 NODE_49263_length_379_cov_1375.720930_g41377_i0forward_frame_2 - 6.7 5.5 5.9 6.3 5.6 5.9 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 RuvB_C PF05491.13 NODE_49257_length_380_cov_1.434783_g41371_i0reverse_frame_3 - 0.15 12.0 1.3 0.7 9.8 0.3 2.1 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain Molybdopterin PF00384.22 NODE_49244_length_380_cov_2.353623_g41358_i0reverse_frame_2 - 2.8e-10 39.7 0.0 3.4e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase DUF1180 PF06679.12 NODE_49242_length_380_cov_2.373913_g41356_i0reverse_frame_3 - 0.18 12.2 1.6 0.23 11.9 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) EcoRI PF02963.16 NODE_49241_length_380_cov_2.431884_g41355_i0reverse_frame_2 - 0.21 10.6 0.0 0.37 9.7 0.0 1.5 1 1 1 2 2 2 0 Restriction endonuclease EcoRI Lipocalin_2 PF08212.12 NODE_49238_length_380_cov_2.544928_g41352_i0forward_frame_3 - 2.1e-32 112.0 0.0 2.4e-32 111.9 0.0 1.0 1 0 0 1 1 1 1 Lipocalin-like domain Lipocalin PF00061.23 NODE_49238_length_380_cov_2.544928_g41352_i0forward_frame_3 - 0.0019 18.4 0.0 0.0021 18.3 0.0 1.1 1 0 0 1 1 1 1 Lipocalin / cytosolic fatty-acid binding protein family Acyltransferase PF01553.21 NODE_49237_length_380_cov_2.718841_g41351_i0forward_frame_2 - 1.1e-13 51.0 0.2 1.3e-13 50.8 0.2 1.2 1 0 0 1 1 1 1 Acyltransferase Plant_NMP1 PF06694.11 NODE_49229_length_380_cov_44.060870_g41343_i0reverse_frame_2 - 0.017 14.2 0.0 0.018 14.2 0.0 1.2 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) DUF4679 PF15728.5 NODE_49225_length_380_cov_56.539130_g41339_i0reverse_frame_3 - 0.025 13.6 1.7 0.029 13.4 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) FAM176 PF14851.6 NODE_49225_length_380_cov_56.539130_g41339_i0reverse_frame_3 - 0.039 13.6 2.9 0.05 13.3 2.9 1.2 1 0 0 1 1 1 0 FAM176 family GxGYxYP_C PF14323.6 NODE_49225_length_380_cov_56.539130_g41339_i0reverse_frame_3 - 0.064 13.1 1.9 0.078 12.8 1.9 1.0 1 0 0 1 1 1 0 GxGYxYP putative glycoside hydrolase C-terminal domain Ytp1 PF10355.9 NODE_49225_length_380_cov_56.539130_g41339_i0forward_frame_2 - 0.0036 16.6 0.7 0.0041 16.4 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (Ytp1) PSP1 PF04468.12 NODE_49223_length_380_cov_60.034783_g41337_i0reverse_frame_2 - 0.11 12.8 0.1 0.17 12.2 0.1 1.3 1 0 0 1 1 1 0 PSP1 C-terminal conserved region DUF1829 PF08862.10 NODE_49218_length_380_cov_68.426087_g41332_i0reverse_frame_2 - 0.018 15.5 0.1 0.031 14.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF1829 Cript PF10235.9 NODE_49217_length_380_cov_69.150725_g41331_i0forward_frame_2 - 0.76 10.4 12.4 1.1 9.9 12.4 1.4 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT Phage_CP76 PF06892.11 NODE_49216_length_380_cov_71.055072_g41330_i0forward_frame_3 - 0.018 14.6 0.2 0.023 14.2 0.2 1.1 1 0 0 1 1 1 0 Phage regulatory protein CII (CP76) ABC2_membrane PF01061.24 NODE_49214_length_380_cov_73.652174_g41328_i0forward_frame_3 - 1.5e-07 31.1 3.9 2.3e-07 30.5 0.7 2.0 2 0 0 2 2 2 1 ABC-2 type transporter DUF4064 PF13273.6 NODE_49214_length_380_cov_73.652174_g41328_i0forward_frame_3 - 0.032 14.5 1.4 0.051 13.9 1.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) Vpu PF00558.19 NODE_49214_length_380_cov_73.652174_g41328_i0forward_frame_3 - 0.044 13.5 0.7 0.077 12.8 0.7 1.3 1 0 0 1 1 1 0 Vpu protein Claudin_2 PF13903.6 NODE_49214_length_380_cov_73.652174_g41328_i0forward_frame_3 - 2.9 7.6 7.9 5.9 6.6 0.4 2.0 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction DUF4670 PF15709.5 NODE_49211_length_380_cov_75.185507_g41325_i0reverse_frame_3 - 0.03 13.7 0.2 0.03 13.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4670) DUF2661 PF10860.8 NODE_49210_length_380_cov_75.666667_g41324_i0reverse_frame_3 - 0.032 14.3 2.0 0.11 12.6 0.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2661) DUF3138 PF11336.8 NODE_49204_length_380_cov_95.191304_g41318_i0reverse_frame_2 - 0.11 11.1 0.0 0.13 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) U-box PF04564.15 NODE_49204_length_380_cov_95.191304_g41318_i0forward_frame_3 - 0.058 13.6 0.0 0.08 13.1 0.0 1.2 1 0 0 1 1 1 0 U-box domain TM2 PF05154.16 NODE_49201_length_380_cov_130.330435_g41315_i0forward_frame_3 - 0.048 14.0 0.1 0.048 14.0 0.1 2.1 2 0 0 2 2 2 0 TM2 domain EF-hand_6 PF13405.6 NODE_49197_length_380_cov_154.171014_g41311_i0forward_frame_2 - 0.071 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 NODE_49197_length_380_cov_154.171014_g41311_i0forward_frame_2 - 0.15 11.6 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 EF hand GalP_UDP_transf PF01087.22 NODE_49196_length_380_cov_155.460870_g41310_i0forward_frame_2 - 0.02 15.4 0.0 0.025 15.0 0.0 1.1 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, N-terminal domain HMG_box PF00505.19 NODE_49186_length_380_cov_601.750725_g41300_i0reverse_frame_3 - 9.1e-14 51.6 5.0 1.3e-13 51.2 5.0 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_49186_length_380_cov_601.750725_g41300_i0reverse_frame_3 - 1.9e-09 37.9 6.0 3.4e-09 37.2 6.0 1.4 1 0 0 1 1 1 1 HMG-box domain Protamine_like PF06382.11 NODE_49186_length_380_cov_601.750725_g41300_i0reverse_frame_3 - 0.073 13.3 2.4 0.098 12.8 2.4 1.3 1 1 0 1 1 1 0 Protamine and protamine like GST_N_3 PF13417.6 NODE_49184_length_380_cov_1943.028986_g41298_i0forward_frame_2 - 1.7e-15 57.2 0.0 2.6e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 NODE_49184_length_380_cov_1943.028986_g41298_i0forward_frame_2 - 2e-11 44.1 0.0 2.5e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 NODE_49184_length_380_cov_1943.028986_g41298_i0forward_frame_2 - 1.4e-06 28.5 0.0 1.9e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 NODE_49184_length_380_cov_1943.028986_g41298_i0forward_frame_2 - 0.0019 18.4 0.0 0.0036 17.5 0.0 1.5 1 0 0 1 1 1 1 Glutaredoxin HMG_box PF00505.19 NODE_49183_length_380_cov_2299.411594_g41297_i0reverse_frame_3 - 9.1e-09 35.6 0.2 9.1e-09 35.6 0.2 1.5 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_49183_length_380_cov_2299.411594_g41297_i0reverse_frame_3 - 5.2e-05 23.8 0.1 8.8e-05 23.0 0.1 1.4 1 0 0 1 1 1 1 HMG-box domain Z1 PF10593.9 NODE_49181_length_381_cov_1.442197_g41295_i0forward_frame_2 - 0.16 11.5 3.8 0.18 11.3 3.8 1.1 1 0 0 1 1 1 0 Z1 domain TMEM51 PF15345.6 NODE_49181_length_381_cov_1.442197_g41295_i0forward_frame_2 - 0.35 10.7 5.5 0.42 10.4 5.5 1.3 1 0 0 1 1 1 0 Transmembrane protein 51 Mit_KHE1 PF10173.9 NODE_49181_length_381_cov_1.442197_g41295_i0forward_frame_2 - 1.5 8.8 6.5 2.1 8.4 6.5 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related DUF423 PF04241.15 NODE_49179_length_381_cov_1.687861_g41293_i0reverse_frame_2 - 2.9 8.2 4.5 0.82 9.9 0.8 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF423) Protamine_3 PF08188.11 NODE_49179_length_381_cov_1.687861_g41293_i0forward_frame_3 - 0.66 10.2 6.7 4.9 7.4 0.1 2.8 3 1 0 3 3 3 0 Spermatozal protamine family NTP_transferase PF00483.23 NODE_49172_length_381_cov_2.369942_g41286_i0forward_frame_3 - 1.1e-20 74.3 0.2 1.3e-20 74.1 0.2 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase DUF1293 PF06950.11 NODE_49171_length_381_cov_2.375723_g41285_i0reverse_frame_2 - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1293) DUF2732 PF10809.8 NODE_49170_length_381_cov_2.427746_g41284_i0forward_frame_2 - 0.15 11.9 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2732) DUF3930 PF13067.6 NODE_49169_length_381_cov_2.459538_g41283_i0forward_frame_2 - 0.093 13.0 0.1 0.17 12.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3930) DUF4942 PF13708.6 NODE_49168_length_381_cov_2.632948_g41282_i0reverse_frame_2 - 0.0093 16.0 0.4 0.01 15.8 0.4 1.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4942) TSP_1 PF00090.19 NODE_49165_length_381_cov_2.705202_g41279_i0reverse_frame_3 - 0.11 12.8 2.0 5.3 7.3 0.0 2.3 2 0 0 2 2 2 0 Thrombospondin type 1 domain IQ PF00612.27 NODE_49165_length_381_cov_2.705202_g41279_i0reverse_frame_2 - 0.0036 17.0 7.2 0.0061 16.3 0.1 3.4 3 0 0 3 3 3 1 IQ calmodulin-binding motif BSD PF03909.17 NODE_49165_length_381_cov_2.705202_g41279_i0reverse_frame_2 - 0.039 14.0 1.0 3.2 7.8 0.1 2.3 2 0 0 2 2 2 0 BSD domain Sugar_tr PF00083.24 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 2.7e-17 62.8 12.2 3.2e-17 62.5 12.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 4.1e-17 62.1 17.3 4.4e-17 62.1 17.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_5 PF05631.14 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 0.00053 19.0 1.5 0.00061 18.8 1.5 1.1 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM TRI12 PF06609.13 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 0.0039 15.7 2.1 0.0045 15.5 2.1 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) UPF0029 PF01205.19 NODE_49161_length_381_cov_3.265896_g41275_i0forward_frame_2 - 0.19 12.1 0.1 0.26 11.7 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein family UPF0029 ATP19 PF11022.8 NODE_49160_length_381_cov_3.404624_g41274_i0reverse_frame_2 - 0.11 12.9 1.3 0.22 11.9 1.3 1.6 1 0 0 1 1 1 0 ATP synthase subunit K DUF2842 PF11003.8 NODE_49160_length_381_cov_3.404624_g41274_i0forward_frame_3 - 1 9.6 7.1 2.3 8.5 1.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2842) SDF PF00375.18 NODE_49158_length_381_cov_4.002890_g41272_i0forward_frame_3 - 5.5e-18 65.2 2.9 5.5e-18 65.2 2.9 1.4 2 0 0 2 2 2 1 Sodium:dicarboxylate symporter family Vma12 PF11712.8 NODE_49158_length_381_cov_4.002890_g41272_i0forward_frame_3 - 0.003 17.6 0.1 0.0051 16.9 0.1 1.3 1 0 0 1 1 1 1 Endoplasmic reticulum-based factor for assembly of V-ATPase Ac76 PF05814.11 NODE_49158_length_381_cov_4.002890_g41272_i0forward_frame_3 - 0.34 10.9 2.7 1.4 9.0 0.3 2.2 2 0 0 2 2 2 0 Orf76 (Ac76) PsbI PF02532.14 NODE_49156_length_381_cov_6.771676_g41270_i0forward_frame_2 - 0.07 13.1 0.6 0.07 13.1 0.6 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) Pap_E4 PF02711.14 NODE_49155_length_381_cov_9.106936_g41269_i0reverse_frame_2 - 0.91 10.5 3.6 1.4 9.9 3.6 1.3 1 0 0 1 1 1 0 E4 protein Fibrinogen_BP PF08017.11 NODE_49143_length_381_cov_72.355491_g41257_i0reverse_frame_3 - 0.078 11.4 0.4 0.11 10.9 0.4 1.2 1 0 0 1 1 1 0 Fibrinogen binding protein SDH_sah PF01972.16 NODE_49136_length_381_cov_79.083815_g41250_i0reverse_frame_3 - 0.23 10.4 0.1 0.28 10.1 0.1 1.1 1 0 0 1 1 1 0 Serine dehydrogenase proteinase Tma16 PF11176.8 NODE_49135_length_381_cov_79.838150_g41249_i0reverse_frame_2 - 0.014 15.2 2.0 0.019 14.8 2.0 1.1 1 0 0 1 1 1 0 Translation machinery-associated protein 16 Spc110_C PF18520.1 NODE_49135_length_381_cov_79.838150_g41249_i0reverse_frame_2 - 1.4 8.5 6.7 0.47 10.1 0.8 2.2 1 1 1 2 2 2 0 Spindle pole body component 110 C-terminal domain GRDA PF04723.14 NODE_49128_length_381_cov_94.020231_g41243_i0reverse_frame_2 - 0.057 13.2 0.9 0.098 12.4 0.9 1.3 1 0 0 1 1 1 0 Glycine reductase complex selenoprotein A VSP PF03302.13 NODE_49128_length_381_cov_94.020231_g41243_i0reverse_frame_2 - 0.15 10.9 32.1 1 8.1 13.3 2.0 1 1 1 2 2 2 0 Giardia variant-specific surface protein dCMP_cyt_deam_2 PF08211.12 NODE_49127_length_381_cov_95.725434_g41242_i0forward_frame_2 - 0.018 15.3 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region zf_C2H2_6 PF18450.1 NODE_49126_length_381_cov_101.560694_g41241_i0reverse_frame_3 - 0.01 15.6 2.5 0.017 14.8 2.5 1.4 1 0 0 1 1 1 1 Zinc Finger domain SEN1_N PF12726.7 NODE_49126_length_381_cov_101.560694_g41241_i0reverse_frame_3 - 0.14 10.3 2.3 0.18 10.0 2.3 1.1 1 0 0 1 1 1 0 SEN1 N terminal zf-C2HC_2 PF13913.6 NODE_49126_length_381_cov_101.560694_g41241_i0reverse_frame_3 - 0.16 11.9 2.1 0.29 11.1 2.1 1.6 1 1 0 1 1 1 0 zinc-finger of a C2HC-type Thaumatin PF00314.17 NODE_49126_length_381_cov_101.560694_g41241_i0reverse_frame_2 - 1 8.9 14.2 0.41 10.2 12.2 1.3 1 1 0 1 1 1 0 Thaumatin family Pkinase PF00069.25 NODE_49124_length_381_cov_105.161850_g41239_i0reverse_frame_2 - 3.5e-15 56.1 0.1 4.1e-15 55.9 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49124_length_381_cov_105.161850_g41239_i0reverse_frame_2 - 2.4e-08 33.6 0.0 2.8e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Beta_helix PF13229.6 NODE_49121_length_381_cov_119.034682_g41236_i0forward_frame_2 - 0.0007 19.5 0.0 0.00081 19.3 0.0 1.2 1 0 0 1 1 1 1 Right handed beta helix region PRR20 PF15708.5 NODE_49119_length_381_cov_120.135838_g41234_i0reverse_frame_3 - 0.064 13.1 0.9 0.08 12.8 0.9 1.2 1 0 0 1 1 1 0 Proline-rich protein family 20 CCDC106 PF15794.5 NODE_49119_length_381_cov_120.135838_g41234_i0reverse_frame_3 - 3.6 7.2 11.3 6.6 6.4 0.7 2.0 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 106 Herpes_UL49_5 PF05702.11 NODE_49117_length_381_cov_122.976879_g41232_i0reverse_frame_3 - 0.11 12.6 0.9 4 7.6 0.1 2.1 2 0 0 2 2 2 0 Herpesvirus UL49.5 envelope/tegument protein Rrn6 PF10214.9 NODE_49109_length_381_cov_177.690751_g41224_i0reverse_frame_2 - 0.13 10.7 0.5 0.16 10.4 0.5 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Cytochrome_CBB3 PF13442.6 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.012 15.9 0.3 0.026 14.9 0.3 1.6 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III DUF2613 PF11021.8 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.12 12.6 0.5 0.12 12.6 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) Cytochrom_C PF00034.21 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.12 13.5 0.5 0.22 12.7 0.5 1.4 1 0 0 1 1 1 0 Cytochrome c Cytochrom_C550 PF14495.6 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.19 11.4 0.0 0.37 10.5 0.0 1.4 2 0 0 2 2 2 0 Cytochrome c-550 domain CD99L2 PF12301.8 NODE_49103_length_381_cov_1003.419075_g41218_i0reverse_frame_2 - 0.21 11.9 0.0 0.31 11.3 0.0 1.3 1 0 0 1 1 1 0 CD99 antigen like protein 2 Oxidored_q5_N PF01059.17 NODE_49101_length_381_cov_1771.098266_g41216_i0forward_frame_3 - 2.5 8.2 9.8 15 5.7 5.3 2.3 2 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus YvrJ PF12841.7 ORF99574 - 0.02 14.4 0.3 0.89 9.1 0.0 2.4 2 0 0 2 2 2 0 YvrJ protein family TMF_TATA_bd PF12325.8 ORF99574 - 0.023 14.9 1.3 0.032 14.5 1.3 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding YojJ PF10372.9 ORF99574 - 0.028 14.5 1.8 3.4 7.8 0.5 2.2 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus LRS4 PF10422.9 ORF99574 - 0.033 13.7 1.3 0.036 13.6 1.3 1.1 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 NCD2 PF04905.13 ORF99574 - 0.043 13.8 0.7 0.063 13.2 0.7 1.2 1 0 0 1 1 1 0 NAB conserved region 2 (NCD2) Baculo_PEP_C PF04513.12 ORF99574 - 0.046 13.7 0.3 0.067 13.2 0.3 1.2 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus BLOC1_2 PF10046.9 ORF99574 - 0.064 13.6 2.3 5.3 7.4 0.1 2.2 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 ORF99574 - 0.098 12.7 1.6 0.14 12.2 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF3375 PF11855.8 ORF99574 - 0.11 11.4 0.1 0.16 10.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3375) XhlA PF10779.9 ORF99574 - 0.28 11.4 2.9 11 6.3 1.6 2.4 1 1 1 2 2 2 0 Haemolysin XhlA DUF778 PF05608.12 ORF99395 - 0.03 14.7 0.0 0.042 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) Ank_2 PF12796.7 ORF96961 - 1.2e-13 51.5 0.0 1.9e-08 34.7 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF96961 - 1.1e-09 37.7 0.1 0.0017 18.6 0.0 3.4 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF96961 - 1.9e-08 34.7 0.0 5.6e-06 26.8 0.0 2.7 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF96961 - 1.8e-07 31.3 0.5 0.025 15.0 0.1 3.4 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF96961 - 2.6e-06 27.6 0.2 6.6e-05 23.1 0.1 2.7 1 1 2 3 3 3 1 Ankyrin repeats (many copies) DUF3392 PF11872.8 ORF95976 - 0.05 13.9 0.5 0.071 13.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3392) TRP PF06011.12 ORF9594 - 3.7e-05 22.6 0.9 5.3e-05 22.1 0.9 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF2781 PF10914.8 ORF9594 - 0.00053 20.4 2.2 0.00061 20.2 2.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2781) DUF4231 PF14015.6 ORF9594 - 0.47 10.9 4.9 0.38 11.2 2.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) zf-RING_2 PF13639.6 ORF92949 - 8.3e-13 48.5 5.4 1.2e-12 48.0 5.4 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF92949 - 1.1e-10 41.0 2.8 2e-10 40.2 2.8 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF92949 - 5.9e-09 35.6 5.9 8.7e-09 35.1 5.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF92949 - 2.4e-08 34.1 3.1 4.9e-08 33.1 3.1 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF92949 - 5.3e-08 32.6 6.3 8.8e-08 31.9 6.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF92949 - 5.8e-08 32.6 6.7 8.3e-08 32.1 6.7 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF92949 - 1.4e-06 28.2 2.7 2.7e-06 27.3 2.7 1.5 1 1 0 1 1 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF92949 - 6.7e-06 25.6 3.0 9.7e-06 25.1 3.0 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF92949 - 7.7e-06 25.9 2.6 1.7e-05 24.7 2.6 1.6 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF92949 - 8.8e-06 25.5 3.6 1.2e-05 25.1 3.6 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING-like PF08746.11 ORF92949 - 1.2e-05 25.6 5.5 1.7e-05 25.0 5.5 1.3 1 0 0 1 1 1 1 RING-like domain zf-Nse PF11789.8 ORF92949 - 8.4e-05 22.3 2.7 0.00014 21.6 2.7 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Prok-RING_4 PF14447.6 ORF92949 - 0.0055 16.6 3.8 0.011 15.6 3.8 1.5 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF92949 - 0.0062 16.3 5.1 0.011 15.5 5.1 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-RING_6 PF14835.6 ORF92949 - 0.0067 16.3 0.8 0.011 15.6 0.8 1.3 1 0 0 1 1 1 1 zf-RING of BARD1-type protein Zf_RING PF16744.5 ORF92949 - 0.0072 16.4 2.9 0.013 15.6 2.9 1.4 1 0 0 1 1 1 1 KIAA1045 RING finger zf-C3HC4_4 PF15227.6 ORF92949 - 0.022 14.9 4.9 0.045 13.9 4.9 1.5 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING PHD PF00628.29 ORF92949 - 0.027 14.3 6.0 0.049 13.5 6.0 1.5 1 0 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 ORF92949 - 0.035 14.0 2.1 0.035 14.0 2.1 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 DZR PF12773.7 ORF92949 - 0.07 13.2 2.9 0.17 12.0 2.9 1.6 1 1 0 1 1 1 0 Double zinc ribbon zf-C3HC4_5 PF17121.5 ORF92949 - 0.1 12.5 4.4 0.36 10.7 4.4 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF92949 - 0.13 12.5 6.3 5.1 7.3 6.3 2.7 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3H2C3 PF17122.5 ORF92949 - 0.13 12.3 6.8 0.39 10.8 6.8 1.8 1 1 0 1 1 1 0 Zinc-finger zf-RING_10 PF16685.5 ORF92949 - 0.19 11.9 4.8 0.32 11.1 4.8 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 RINGv PF12906.7 ORF92949 - 0.21 11.8 4.1 0.41 10.8 4.1 1.5 1 0 0 1 1 1 0 RING-variant domain C1_1 PF00130.22 ORF92949 - 0.28 11.1 6.0 0.15 12.0 2.5 2.0 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn-ribbon_8 PF09723.10 ORF92949 - 0.41 10.8 3.2 0.42 10.8 1.3 1.9 2 0 0 2 2 2 0 Zinc ribbon domain MORN PF02493.20 ORF92906 - 2.1e-13 49.3 21.7 1.1e-05 25.0 1.0 5.6 6 0 0 6 6 6 4 MORN repeat gerPA PF10676.9 ORF92750 - 0.11 12.7 4.4 0.93 9.8 1.9 2.2 2 0 0 2 2 2 0 Spore germination protein gerPA/gerPF She9_MDM33 PF05546.11 ORF9123 - 0.021 14.6 0.2 0.03 14.1 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF9123 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF9123 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger Cyd_oper_YbgE PF09600.10 ORF90476 - 0.053 13.9 0.1 0.083 13.3 0.1 1.3 1 0 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) DUF4223 PF13978.6 ORF90476 - 0.088 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4223) TraS PF10624.9 ORF89405 - 1.1 9.1 6.3 1.3 8.9 6.3 1.1 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS Clr5 PF14420.6 ORF88535 - 1.4 9.2 0.0 1.4 9.2 0.0 2.6 3 1 0 3 3 3 0 Clr5 domain UPF0547 PF10571.9 ORF87377 - 0.073 13.2 1.4 0.073 13.2 1.4 2.4 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 DZR PF12773.7 ORF87377 - 2.7 8.1 13.6 1.4 9.0 3.5 2.5 2 0 0 2 2 2 0 Double zinc ribbon Pkinase PF00069.25 ORF86216 - 2.2e-10 40.4 0.0 2.4e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86216 - 5.3e-05 22.6 0.0 5.6e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Hus1 PF04005.12 ORF83655 - 0.22 10.6 2.1 1.5 7.8 0.1 2.0 2 0 0 2 2 2 0 Hus1-like protein SelR PF01641.18 ORF81765 - 1.9e-49 166.8 0.1 2.1e-49 166.6 0.1 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 ORF81765 - 0.044 14.0 0.9 0.16 12.2 0.9 1.9 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly zf-CRD PF17979.1 ORF80390 - 0.036 14.2 6.4 0.045 13.9 6.4 1.1 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions DUF4571 PF15137.6 ORF80390 - 2.2 7.8 6.3 2.8 7.5 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4571) Ntox28 PF15605.6 ORF79656 - 0.078 13.2 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 28 Tmemb_9 PF05434.11 ORF79040 - 0.24 11.3 0.3 0.28 11.1 0.3 1.1 1 0 0 1 1 1 0 TMEM9 RET_CLD1 PF17756.1 ORF77992 - 0.05 13.9 0.2 0.062 13.6 0.2 1.2 1 0 0 1 1 1 0 RET Cadherin like domain 1 CCDC66 PF15236.6 ORF7792 - 0.00017 21.4 15.9 0.00025 20.9 15.9 1.2 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 66 MCD PF05292.11 ORF7792 - 0.13 11.8 2.1 0.14 11.7 2.1 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase C-terminal domain DUF5401 PF17380.2 ORF7792 - 0.37 8.8 13.3 0.41 8.6 13.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) U79_P34 PF03064.16 ORF7792 - 0.63 9.4 12.1 0.69 9.2 12.1 1.1 1 0 0 1 1 1 0 HSV U79 / HCMV P34 FAM60A PF15396.6 ORF7792 - 1.8 8.5 9.0 2.1 8.3 9.0 1.0 1 0 0 1 1 1 0 Protein Family FAM60A Ureide_permease PF07168.11 ORF7792 - 3.7 6.2 4.7 4.1 6.0 4.7 1.1 1 0 0 1 1 1 0 Ureide permease zf-B_box PF00643.24 ORF76426 - 1.6 9.0 8.2 17 5.6 8.2 2.3 1 1 0 1 1 1 0 B-box zinc finger DEK_C PF08766.11 ORF74740 - 8.3e-08 32.0 0.5 1.4e-07 31.3 0.5 1.3 1 0 0 1 1 1 1 DEK C terminal domain HTH_psq PF05225.16 ORF74683 - 0.071 12.9 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 helix-turn-helix, Psq domain SAP130_C PF16014.5 ORF74451 - 0.5 9.4 3.7 0.55 9.3 3.7 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus Troponin-I_N PF11636.8 ORF73676 - 0.043 13.8 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 Troponin I residues 1-32 TRAM_LAG1_CLN8 PF03798.16 ORF73406 - 1.4e-06 28.2 3.3 1.4e-06 28.2 3.3 1.9 2 0 0 2 2 2 1 TLC domain DUF2721 PF11026.8 ORF7101 - 0.061 13.2 1.0 0.074 12.9 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) TOBE_2 PF08402.10 ORF69693 - 1.2e-09 38.2 0.0 2.2e-09 37.4 0.0 1.5 1 0 0 1 1 1 1 TOBE domain TehB PF03848.14 ORF68746 - 0.059 12.8 0.0 0.076 12.4 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB She9_MDM33 PF05546.11 ORF68491 - 0.051 13.4 0.2 0.073 12.9 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF68491 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF68491 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger RtcB PF01139.17 ORF68415 - 0.0025 17.1 1.0 0.003 16.8 1.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Vicilin_N PF04702.12 ORF68415 - 0.2 11.5 5.7 0.26 11.1 5.7 1.2 1 0 0 1 1 1 0 Vicilin N terminal region She9_MDM33 PF05546.11 ORF68085 - 0.028 14.2 0.2 0.04 13.7 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF68085 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF68085 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger DUF2544 PF11245.8 ORF67822 - 0.022 14.2 0.1 0.026 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2544) Sec23_helical PF04815.15 ORF66544 - 0.056 13.3 0.4 0.11 12.4 0.1 1.6 1 1 1 2 2 2 0 Sec23/Sec24 helical domain PNTB PF02233.16 ORF66544 - 0.085 11.8 0.2 0.084 11.8 0.2 1.1 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit DUF898 PF05987.13 ORF66375 - 1.3e-06 27.8 0.1 1.5e-06 27.5 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF898) Sec23_helical PF04815.15 ORF64138 - 0.056 13.3 0.4 0.11 12.4 0.1 1.6 1 1 1 2 2 2 0 Sec23/Sec24 helical domain PNTB PF02233.16 ORF64138 - 0.085 11.8 0.2 0.084 11.8 0.2 1.1 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit Pkinase PF00069.25 ORF5971 - 1.7e-05 24.3 0.0 2.7e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain TnpW PF14202.6 ORF5971 - 0.045 13.6 3.7 0.13 12.1 0.6 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW FlbD PF06289.11 ORF5971 - 0.052 13.2 0.2 5.6 6.6 0.1 2.3 2 0 0 2 2 2 0 Flagellar and Swarming motility proteins MHYT PF03707.16 ORF5716 - 0.16 12.1 1.8 0.25 11.5 1.8 1.4 1 0 0 1 1 1 0 Bacterial signalling protein N terminal repeat RhoGAP PF00620.27 ORF57066 - 3.1e-05 23.9 0.0 4.7e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 RhoGAP domain ASFV_L11L PF05293.11 ORF56775 - 0.13 12.6 5.0 0.26 11.6 5.0 1.5 1 0 0 1 1 1 0 African swine fever virus (ASFV) L11L protein DUF866 PF05907.13 ORF5674 - 0.13 12.1 1.2 0.17 11.8 1.2 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF866) SPA PF08616.10 ORF54932 - 0.0027 17.6 1.1 0.0043 17.0 0.8 1.5 1 1 1 2 2 2 1 Stabilization of polarity axis Bac_rhodopsin PF01036.18 ORF54478 - 0.066 12.8 0.0 0.084 12.4 0.0 1.1 1 0 0 1 1 1 0 Bacteriorhodopsin-like protein DUF1635 PF07795.11 ORF53505 - 0.077 12.9 2.6 0.088 12.7 2.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) LpxB PF02684.15 ORF52136 - 0.18 10.6 0.9 0.21 10.4 0.9 1.1 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase She9_MDM33 PF05546.11 ORF51265 - 0.049 13.4 0.2 0.069 13.0 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF51265 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF51265 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger Med2 PF11214.8 ORF50600 - 0.0024 18.0 0.5 0.0035 17.5 0.5 1.3 1 0 0 1 1 1 1 Mediator complex subunit 2 DUF1132 PF06575.12 ORF50600 - 0.023 15.1 0.2 0.041 14.3 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1132) FKBP_C PF00254.28 ORF45588 - 0.0005 20.3 0.0 0.00073 19.8 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Med2 PF11214.8 ORF4476 - 0.0024 18.0 0.5 0.0035 17.5 0.5 1.3 1 0 0 1 1 1 1 Mediator complex subunit 2 DUF1132 PF06575.12 ORF4476 - 0.023 15.1 0.2 0.041 14.3 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1132) MUG113 PF13455.6 ORF44175 - 0.041 14.6 0.2 0.051 14.2 0.2 1.3 1 1 0 1 1 1 0 Meiotically up-regulated gene 113 CAMSAP_CKK PF08683.11 ORF42862 - 4.9e-10 39.6 0.0 5.3e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Microtubule-binding calmodulin-regulated spectrin-associated AvrM-A PF18241.1 ORF42373 - 0.021 15.2 0.5 0.025 15.0 0.5 1.1 1 0 0 1 1 1 0 Flax-rust effector AvrM-A DUF1664 PF07889.12 ORF40432 - 0.15 12.1 0.9 0.25 11.4 0.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) RRN3 PF05327.11 ORF40432 - 0.54 8.7 7.0 0.56 8.7 7.0 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 OrfA PF17495.2 ORF37550 - 0.096 12.9 2.5 0.15 12.2 2.5 1.4 1 0 0 1 1 1 0 Vpr-like OrfA DbpA PF03880.15 ORF37513 - 0.16 12.0 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 DbpA RNA binding domain CitMHS PF03600.16 ORF36404 - 0.35 10.0 5.5 0.42 9.8 5.5 1.1 1 0 0 1 1 1 0 Citrate transporter Sigma_reg_N PF13800.6 ORF36404 - 4.3 7.7 6.1 6.1 7.2 5.2 1.8 1 1 0 1 1 1 0 Sigma factor regulator N-terminal DUF3159 PF11361.8 ORF36347 - 0.068 12.9 0.5 0.13 12.0 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3159) OB_NTP_bind PF07717.16 ORF36347 - 0.088 13.2 0.0 0.16 12.4 0.0 1.4 1 0 0 1 1 1 0 Oligonucleotide/oligosaccharide-binding (OB)-fold She9_MDM33 PF05546.11 ORF36152 - 0.047 13.5 0.2 0.064 13.1 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF36152 - 0.14 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF36152 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger TrmO PF01980.16 ORF34045 - 0.043 14.0 0.0 0.085 13.1 0.0 1.5 1 1 0 1 1 1 0 tRNA-methyltransferase O BRCT PF00533.26 ORF32755 - 9.2e-11 42.0 0.0 1.3e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain PTCB-BRCT PF12738.7 ORF32755 - 4.5e-10 39.3 0.2 7.7e-10 38.6 0.2 1.3 1 0 0 1 1 1 1 twin BRCT domain BRCT_2 PF16589.5 ORF32755 - 0.00028 21.2 0.1 0.00034 21.0 0.1 1.3 1 1 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain C1_2 PF03107.16 ORF32755 - 0.1 12.9 5.0 0.25 11.7 5.0 1.6 1 1 0 1 1 1 0 C1 domain zf-B_box PF00643.24 ORF32755 - 0.22 11.7 7.6 0.2 11.8 5.3 2.1 2 1 0 2 2 2 0 B-box zinc finger ACPS PF01648.20 ORF31767 - 5.5e-24 84.5 0.0 6.1e-24 84.4 0.0 1.0 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily Tecti-min-caps PF09300.10 ORF31767 - 0.089 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Tectiviridae, minor capsid FANCM-MHF_bd PF16783.5 ORF31767 - 0.1 12.7 0.0 0.47 10.5 0.0 1.9 2 0 0 2 2 2 0 FANCM to MHF binding domain YdaS_antitoxin PF15943.5 ORF31767 - 0.11 12.3 0.0 0.31 11.0 0.0 1.7 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks208.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks208.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks208.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks208.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MAPEG PF01124.18 ORF31477 - 6e-11 42.4 0.1 7.3e-11 42.1 0.1 1.1 1 0 0 1 1 1 1 MAPEG family SelR PF01641.18 ORF312 - 1.9e-49 166.8 0.1 2.1e-49 166.6 0.1 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 ORF312 - 0.044 14.0 0.9 0.16 12.2 0.9 1.9 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Ricin_B_lectin PF00652.22 ORF29436 - 5.9e-20 71.8 3.9 7.3e-20 71.5 3.9 1.0 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF29436 - 2.3e-11 44.3 4.4 1.5e-07 32.0 0.8 2.1 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 ORF29436 - 0.0063 16.1 0.1 0.024 14.2 0.1 1.8 1 1 1 2 2 2 1 Cytolethal distending toxin A/C domain CIDR1_gamma PF18562.1 ORF29436 - 1.2 9.3 7.1 20 5.3 0.0 3.3 3 0 0 3 3 3 0 Cysteine-Rich Interdomain Region 1 gamma Mo25 PF08569.11 ORF29346 - 1.5e-17 64.0 8.1 1.7e-17 63.8 8.1 1.0 1 0 0 1 1 1 1 Mo25-like Sid-5 PF17204.3 ORF29134 - 0.12 12.6 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Sid-5 family DUF4459 PF14673.6 ORF28780 - 0.22 11.4 0.0 0.28 11.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4459) Herpes_heli_pri PF05774.11 ORF28451 - 0.069 13.4 0.0 0.097 12.9 0.0 1.3 1 0 0 1 1 1 0 Herpesvirus helicase-primase complex component ATP-synt_I PF03899.15 ORF28247 - 7.2e-15 55.2 13.9 1e-14 54.7 13.9 1.2 1 0 0 1 1 1 1 ATP synthase I chain 2TM PF13239.6 ORF28247 - 6.8 7.1 7.6 6.3 7.2 0.2 2.2 2 0 0 2 2 2 0 2TM domain PPR_long PF17177.4 ORF25865 - 0.02 14.2 0.0 0.024 14.0 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP PADR1 PF08063.12 ORF25003 - 2.1e-08 33.8 0.1 3.5e-08 33.1 0.1 1.4 1 0 0 1 1 1 1 PADR1 (NUC008) domain SAP PF02037.27 ORF25003 - 0.0037 17.0 0.9 0.0056 16.4 0.1 1.7 2 0 0 2 2 2 1 SAP domain SDA1 PF05285.12 ORF25003 - 0.02 14.3 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 SDA1 PPP5 PF08321.12 ORF24769 - 0.015 15.6 0.1 0.029 14.7 0.1 1.5 1 1 0 1 1 1 0 PPP5 TPR repeat region HARE-HTH PF05066.13 ORF24769 - 0.071 13.5 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 HB1, ASXL, restriction endonuclease HTH domain HTH_psq PF05225.16 ORF23781 - 0.066 13.0 0.1 0.88 9.4 0.0 2.3 2 0 0 2 2 2 0 helix-turn-helix, Psq domain SR-25 PF10500.9 ORF22329 - 1 8.9 14.6 1.3 8.6 14.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein ThuA PF06283.11 ORF22140 - 0.013 15.7 0.0 0.016 15.4 0.0 1.1 1 0 0 1 1 1 0 Trehalose utilisation DUF1018 PF06252.12 ORF20254 - 0.11 13.4 0.0 0.12 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1018) DUF1072 PF06380.11 ORF19509 - 0.096 12.6 1.7 0.85 9.6 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) DUF2735 PF10931.8 ORF19222 - 0.021 15.5 0.0 0.047 14.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2735) DUF1635 PF07795.11 ORF177 - 0.077 12.9 2.6 0.088 12.7 2.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) RP853 PF17542.2 ORF17489 - 0.00039 19.7 2.2 0.00043 19.5 2.2 1.0 1 0 0 1 1 1 1 Uncharacterized RP853 Arm_3 PF16186.5 ORF17489 - 0.027 14.0 0.1 0.063 12.9 0.1 1.7 1 0 0 1 1 1 0 Atypical Arm repeat Glucos_trans_II PF14264.6 ORF17489 - 0.1 11.9 0.1 0.12 11.8 0.1 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII She9_MDM33 PF05546.11 ORF16268 - 0.05 13.4 0.2 0.07 12.9 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF16268 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF16268 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger DUF4459 PF14673.6 ORF16170 - 0.22 11.4 0.0 0.28 11.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4459) HXXEE PF13787.6 ORF16106 - 0.031 15.1 2.2 6.3 7.6 0.6 2.9 2 1 0 2 2 2 0 Protein of unknown function with HXXEE motif dUTPase PF00692.19 ORF16106 - 0.14 11.9 0.7 3.2 7.5 0.2 2.0 1 1 1 2 2 2 0 dUTPase ENOD93 PF03386.14 ORF16106 - 0.39 10.6 4.0 8.7 6.3 0.1 3.0 1 1 2 3 3 3 0 Early nodulin 93 ENOD93 protein DUF3450 PF11932.8 ORF16093 - 0.00076 18.9 10.4 0.00076 18.9 10.4 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) HAP1_N PF04849.13 ORF16093 - 0.0022 17.2 18.2 0.0026 17.0 18.2 1.2 1 0 0 1 1 1 1 HAP1 N-terminal conserved region Rossmann-like PF10727.9 ORF16093 - 0.0087 15.9 0.0 0.027 14.3 0.0 1.7 2 0 0 2 2 2 1 Rossmann-like domain Chibby PF14645.6 ORF16093 - 0.024 15.1 8.0 0.065 13.6 1.1 2.2 2 0 0 2 2 2 0 Chibby family Taxilin PF09728.9 ORF16093 - 0.026 13.7 19.4 0.033 13.4 19.4 1.2 1 0 0 1 1 1 0 Myosin-like coiled-coil protein Rootletin PF15035.6 ORF16093 - 0.031 14.3 15.7 0.05 13.6 15.7 1.3 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion G_path_suppress PF15991.5 ORF16093 - 0.04 14.0 15.2 0.047 13.8 15.2 1.1 1 0 0 1 1 1 0 G-protein pathway suppressor Spc29 PF17082.5 ORF16093 - 0.042 13.7 6.2 0.064 13.1 6.1 1.3 1 1 0 1 1 1 0 Spindle Pole Component 29 DUF2381 PF09544.10 ORF16093 - 0.045 13.3 2.4 0.05 13.1 1.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2381) GAS PF13851.6 ORF16093 - 0.08 12.3 19.6 0.22 10.9 19.6 1.6 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Wtap PF17098.5 ORF16093 - 0.16 11.9 13.0 0.18 11.8 12.5 1.5 1 1 0 1 1 1 0 WTAP/Mum2p family SOG2 PF10428.9 ORF16093 - 0.19 10.9 5.1 0.21 10.8 5.1 1.2 1 0 0 1 1 1 0 RAM signalling pathway protein TMF_DNA_bd PF12329.8 ORF16093 - 0.21 11.6 24.1 0.039 13.9 18.5 2.3 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding ERM PF00769.19 ORF16093 - 0.34 10.7 14.8 0.47 10.2 14.8 1.2 1 0 0 1 1 1 0 Ezrin/radixin/moesin family TSC22 PF01166.18 ORF16093 - 0.42 11.0 13.3 0.18 12.2 3.3 3.1 2 1 1 3 3 2 0 TSC-22/dip/bun family YabA PF06156.13 ORF16093 - 0.46 11.2 14.1 1 10.0 4.4 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Cnn_1N PF07989.11 ORF16093 - 0.6 10.3 15.5 0.36 11.0 12.6 2.2 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 AAA_13 PF13166.6 ORF16093 - 0.64 8.6 11.8 0.72 8.4 11.8 1.0 1 0 0 1 1 1 0 AAA domain bZIP_1 PF00170.21 ORF16093 - 1.3 9.1 16.3 3.4 7.9 7.2 2.8 1 1 1 2 2 2 0 bZIP transcription factor Myc-LZ PF02344.15 ORF16093 - 1.9 8.7 17.6 1.5 9.0 3.6 2.8 2 0 0 2 2 2 0 Myc leucine zipper domain KIAA1430 PF13879.6 ORF16093 - 1.9 9.3 12.5 2.4 9.0 12.5 1.3 1 0 0 1 1 1 0 KIAA1430 homologue FlaC_arch PF05377.11 ORF16093 - 2.9 8.3 7.5 2 8.9 0.6 2.8 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) YlqD PF11068.8 ORF16093 - 3.5 8.0 17.7 4.7 7.6 17.0 1.6 1 1 1 2 2 2 0 YlqD protein TMPIT PF07851.13 ORF16093 - 3.7 6.7 9.7 4.3 6.5 9.7 1.2 1 0 0 1 1 1 0 TMPIT-like protein bZIP_2 PF07716.15 ORF16093 - 4.2 7.5 17.2 0.51 10.5 4.1 3.1 2 1 1 3 3 3 0 Basic region leucine zipper UPF0242 PF06785.11 ORF16093 - 5 7.2 19.7 2.9 8.0 5.7 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF724 PF05266.14 ORF16093 - 6 6.6 14.6 15 5.4 14.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) CENP-H PF05837.12 ORF16093 - 6.7 7.2 16.4 4.1 7.9 3.1 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) APG6_N PF17675.1 ORF16093 - 6.8 7.2 21.9 25 5.4 22.1 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF16093 - 7.3 7.1 25.2 1.2 9.6 11.2 2.4 1 1 1 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 ORF16093 - 7.5 6.4 21.7 1 9.2 10.2 3.3 1 1 3 4 4 4 0 Septum formation initiator WASH-7_C PF14746.6 ORF152195 - 6.9e-36 123.6 0.8 8.1e-36 123.3 0.8 1.1 1 0 0 1 1 1 1 WASH complex subunit 7, C-terminal PhaP_Bmeg PF09602.10 ORF152191 - 0.34 10.8 5.3 2.7 7.9 1.8 2.1 1 1 1 2 2 2 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) DUF842 PF05811.13 ORF151422 - 0.031 14.0 8.1 1.1 9.0 8.0 2.1 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) CSD PF00313.22 ORF149094 - 1.5e-17 63.2 0.3 2e-17 62.8 0.3 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF149094 - 0.016 14.9 0.6 0.027 14.1 0.6 1.5 1 0 0 1 1 1 0 Ribonuclease B OB domain DUF4023 PF13215.6 ORF147955 - 0.14 12.2 0.9 0.29 11.1 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4023) LpxB PF02684.15 ORF145667 - 0.18 10.6 0.9 0.21 10.4 0.9 1.1 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase IGF2_C PF08365.11 ORF143846 - 0.022 14.8 0.1 0.055 13.5 0.1 1.7 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide YMF19 PF02326.15 ORF142594 - 0.73 10.6 3.7 1.9 9.3 0.1 2.1 1 1 1 2 2 2 0 Plant ATP synthase F0 M16C_assoc PF08367.11 ORF139525 - 0.017 14.2 0.5 0.035 13.2 0.0 1.6 2 0 0 2 2 2 0 Peptidase M16C associated DUF5571 PF17732.1 ORF138522 - 0.099 12.1 2.4 0.11 11.9 2.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5571) SHIPPO-rpt PF07004.12 ORF135852 - 1.2e-13 51.2 16.7 2.1e-05 25.2 3.8 4.4 4 0 0 4 4 4 4 Sperm-tail PG-rich repeat SelR PF01641.18 ORF13584 - 1.9e-49 166.8 0.1 2.1e-49 166.6 0.1 1.0 1 0 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 ORF13584 - 0.044 14.0 0.9 0.16 12.2 0.9 1.9 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Opi1 PF08618.10 ORF134233 - 1.2 8.4 5.7 1.4 8.1 5.7 1.0 1 0 0 1 1 1 0 Transcription factor Opi1 PMP22_Claudin PF00822.20 ORF134209 - 6.2 6.7 8.6 14 5.5 7.5 2.0 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin family SPATA19 PF15212.6 ORF133888 - 0.014 15.6 0.9 0.027 14.7 0.2 1.7 1 1 1 2 2 2 0 Spermatogenesis-associated protein 19, mitochondrial DUF5496 PF17600.2 ORF133888 - 0.052 13.6 0.1 0.081 13.0 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5496) DUF3496 PF12001.8 ORF133888 - 0.14 12.6 5.9 0.23 11.8 5.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) She9_MDM33 PF05546.11 ORF132121 - 0.021 14.6 0.2 0.03 14.1 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF132121 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF132121 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger Aa_trans PF01490.18 ORF131917 - 0.0048 15.6 5.5 0.0072 15.1 1.2 2.0 1 1 1 2 2 2 2 Transmembrane amino acid transporter protein DUF4459 PF14673.6 ORF131579 - 0.22 11.4 0.0 0.28 11.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4459) zf-C2HC5 PF06221.13 ORF13114 - 9.7 6.3 10.2 0.41 10.7 1.0 2.4 2 1 0 2 2 2 0 Putative zinc finger motif, C2HC5-type Dioxygenase_C PF00775.21 ORF128806 - 0.096 12.1 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Dioxygenase SSB PF00436.25 ORF128782 - 0.17 11.9 0.2 0.23 11.5 0.2 1.2 1 0 0 1 1 1 0 Single-strand binding protein family DUF587 PF04532.12 ORF128054 - 0.03 13.6 1.0 0.04 13.2 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF587) CCD48 PF15799.5 ORF127740 - 0.0056 15.1 4.4 0.0065 14.8 4.4 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 48 Alanine_zipper PF11839.8 ORF127740 - 0.12 12.7 6.1 0.17 12.3 6.1 1.2 1 0 0 1 1 1 0 Alanine-zipper, major outer membrane lipoprotein CTNNB1_binding PF08347.11 ORF127342 - 0.043 14.0 4.5 0.056 13.6 4.5 1.1 1 0 0 1 1 1 0 N-terminal CTNNB1 binding COMM_domain PF07258.14 ORF127342 - 0.059 13.5 1.7 1 9.5 1.2 2.2 1 1 1 2 2 2 0 COMM domain NADH-G_4Fe-4S_3 PF10588.9 ORF127210 - 0.0093 15.5 0.5 0.0093 15.5 0.5 2.3 1 1 1 2 2 2 2 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF5085 PF16895.5 ORF127200 - 0.019 15.3 0.9 0.039 14.3 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5085) She9_MDM33 PF05546.11 ORF124544 - 0.05 13.4 0.2 0.07 12.9 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF124544 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF124544 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger TMF_TATA_bd PF12325.8 ORF124076 - 0.017 15.4 0.3 0.024 14.8 0.1 1.4 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DivIC PF04977.15 ORF124076 - 0.024 14.4 3.1 2.8 7.8 0.3 2.2 2 0 0 2 2 2 0 Septum formation initiator Ras PF00071.22 ORF123976 - 3.1e-15 56.1 0.0 3.9e-15 55.8 0.0 1.1 1 0 0 1 1 1 1 Ras family RsgA_GTPase PF03193.16 ORF123976 - 0.0052 16.7 0.0 0.0064 16.4 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase Arf PF00025.21 ORF123976 - 0.14 11.6 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family She9_MDM33 PF05546.11 ORF123662 - 0.021 14.6 0.2 0.03 14.1 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF123662 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF123662 - 0.27 11.4 6.3 0.51 10.5 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger Tti2 PF10521.9 ORF123552 - 0.031 13.8 0.1 0.035 13.7 0.1 1.0 1 0 0 1 1 1 0 Tti2 family RIFIN PF02009.16 ORF123552 - 0.068 13.1 0.1 0.075 12.9 0.1 1.1 1 0 0 1 1 1 0 Rifin DUF4337 PF14235.6 ORF123552 - 0.086 13.0 3.9 0.1 12.7 3.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF2157 PF09925.9 ORF123552 - 0.092 12.5 2.1 0.12 12.2 2.1 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF2207 PF09972.9 ORF123552 - 0.12 11.2 0.0 0.13 11.0 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Scs3p PF10261.9 ORF123552 - 0.2 11.2 0.4 0.24 10.9 0.4 1.1 1 0 0 1 1 1 0 Inositol phospholipid synthesis and fat-storage-inducing TM Bac_luciferase PF00296.20 ORF123268 - 0.00011 21.7 0.5 0.00013 21.5 0.5 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase zf-4CXXC_R1 PF10497.9 ORF122248 - 0.74 10.1 6.3 1.1 9.5 0.3 2.2 1 1 1 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 MUG113 PF13455.6 ORF121680 - 0.31 11.8 6.1 0.15 12.7 3.2 1.9 1 1 1 2 2 2 0 Meiotically up-regulated gene 113 M-inducer_phosp PF06617.13 ORF120256 - 0.16 11.3 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 M-phase inducer phosphatase DUF4728 PF15860.5 ORF120022 - 0.071 13.8 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4728) DRE2_N PF16803.5 ORF119743 - 0.00046 20.4 0.3 0.00068 19.9 0.3 1.4 1 1 0 1 1 1 1 Fe-S cluster assembly protein DRE2 N-terminus BCDHK_Adom3 PF10436.9 ORF119743 - 0.041 13.7 0.2 0.049 13.5 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase She9_MDM33 PF05546.11 ORF118878 - 0.05 13.4 0.2 0.07 12.9 0.2 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF118878 - 0.13 12.1 5.3 0.72 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF118878 - 0.27 11.4 6.3 0.51 10.5 6.3 1.5 1 0 0 1 1 1 0 B-box zinc finger TssO PF17561.2 ORF117954 - 0.045 13.9 1.5 1.8 8.7 0.4 2.1 1 1 1 2 2 2 0 Type VI secretion system, TssO MgtE PF01769.16 ORF117846 - 5.2 7.5 13.9 37 4.7 13.9 1.9 1 1 0 1 1 1 0 Divalent cation transporter PsiB PF06290.11 ORF117089 - 0.14 11.7 0.3 0.2 11.1 0.3 1.4 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) Sec23_helical PF04815.15 ORF116496 - 0.056 13.3 0.4 0.11 12.4 0.1 1.6 1 1 1 2 2 2 0 Sec23/Sec24 helical domain PNTB PF02233.16 ORF116496 - 0.085 11.8 0.2 0.084 11.8 0.2 1.1 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit PsiB PF06290.11 ORF113911 - 0.14 11.7 0.3 0.2 11.1 0.3 1.4 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) HEAT_2 PF13646.6 ORF11236 - 7e-13 48.8 3.3 5e-07 30.0 0.2 2.0 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF11236 - 4.5e-05 23.4 0.2 0.24 11.8 0.0 3.2 3 0 0 3 3 3 2 HEAT repeat Cnd1 PF12717.7 ORF11236 - 0.034 14.2 0.0 0.15 12.1 0.1 1.8 1 1 1 2 2 2 0 non-SMC mitotic condensation complex subunit 1 ATE_N PF04376.13 ORF111852 - 0.053 13.9 1.8 0.16 12.3 1.3 1.9 1 1 1 2 2 2 0 Arginine-tRNA-protein transferase, N terminus PHD PF00628.29 ORF111748 - 0.0028 17.5 0.6 0.0028 17.5 0.6 1.9 2 1 0 2 2 2 1 PHD-finger Glyco_hydro_108 PF05838.12 ORF111748 - 0.077 13.5 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase 108 zf-B_box PF00643.24 ORF111748 - 0.8 9.9 7.9 0.2 11.9 4.1 1.9 2 0 0 2 2 2 0 B-box zinc finger EST1_DNA_bind PF10373.9 ORF110674 - 0.018 14.5 2.8 0.02 14.4 2.8 1.1 1 0 0 1 1 1 0 Est1 DNA/RNA binding domain HTH_10 PF04967.12 ORF110674 - 0.096 12.5 0.1 0.22 11.4 0.1 1.5 1 0 0 1 1 1 0 HTH DNA binding domain ETRAMP PF09716.10 ORF110674 - 3.5 7.8 4.7 3.3 7.9 0.2 2.2 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) M16C_assoc PF08367.11 ORF110535 - 0.017 14.2 0.5 0.035 13.2 0.0 1.6 2 0 0 2 2 2 0 Peptidase M16C associated DUF2681 PF10883.8 ORF110365 - 0.027 14.9 0.0 0.034 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) Cyclin_N PF00134.23 ORF109284 - 0.00016 21.4 0.0 0.00022 21.0 0.0 1.4 1 0 0 1 1 1 1 Cyclin, N-terminal domain DUF4041 PF13250.6 ORF109284 - 0.22 11.4 3.7 0.75 9.7 0.4 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4041) SpoVS PF04232.12 ORF109238 - 3.2e-08 33.2 1.3 4.7e-08 32.6 1.3 1.3 1 0 0 1 1 1 1 Stage V sporulation protein S (SpoVS) Lipoprotein_2 PF00921.17 ORF109238 - 0.059 12.9 3.2 0.067 12.7 3.2 1.1 1 0 0 1 1 1 0 Borrelia lipoprotein DUF5470 PF17564.2 ORF107901 - 0.067 13.4 0.3 0.12 12.6 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5470) DUF745 PF05335.13 ORF105960 - 0.038 13.7 0.6 0.043 13.5 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) Med2 PF11214.8 ORF105960 - 0.063 13.4 7.3 0.18 12.0 6.5 2.1 1 1 0 1 1 1 0 Mediator complex subunit 2 AsnC_trans_reg2 PF17805.1 ORF105960 - 0.13 12.5 0.9 0.29 11.3 0.9 1.6 1 1 0 1 1 1 0 AsnC-like ligand binding domain EMP24_GP25L PF01105.24 ORF105960 - 0.37 10.7 8.2 0.43 10.5 8.2 1.1 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD UPF0242 PF06785.11 ORF105960 - 0.56 10.3 10.8 0.66 10.1 10.8 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CAF-1_p60_C PF15512.6 ORF105043 - 0.43 11.0 4.8 0.65 10.5 4.8 1.4 1 1 0 1 1 1 0 Chromatin assembly factor complex 1 subunit p60, C-terminal MerC PF03203.14 ORF104235 - 1.7 9.1 6.2 0.52 10.8 2.3 1.9 1 1 1 2 2 2 0 MerC mercury resistance protein HA2 PF04408.23 ORF103437 - 0.093 13.0 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Helicase associated domain (HA2) PI3K_1B_p101 PF10486.9 ORF103437 - 0.13 10.0 2.1 0.1 10.3 2.1 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit PPP4R2 PF09184.11 ORF103437 - 0.45 10.1 10.8 0.49 9.9 10.8 1.1 1 0 0 1 1 1 0 PPP4R2 Nop14 PF04147.12 ORF103437 - 0.46 8.6 11.8 0.4 8.8 11.8 1.1 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 ORF103437 - 3.8 5.7 10.0 4.1 5.6 10.0 1.1 1 0 0 1 1 1 0 CDC45-like protein NOA36 PF06524.12 ORF103437 - 5.2 6.3 13.9 6.3 6.0 13.9 1.1 1 0 0 1 1 1 0 NOA36 protein DUF4746 PF15928.5 ORF103437 - 9.5 5.5 10.5 11 5.3 10.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Sulfotransfer_1 PF00685.27 ORF102751 - 5.2e-12 45.8 0.3 5.9e-12 45.6 0.3 1.0 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF102751 - 2.3e-08 34.7 0.0 3.1e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Sulfotransferase family MORN PF02493.20 ORF102280 - 1.5e-17 62.4 31.1 1.6e-08 33.9 1.3 6.1 6 1 0 6 6 6 5 MORN repeat SEC-C PF02810.15 ORF101940 - 0.13 12.2 1.1 0.13 12.2 1.1 2.1 2 0 0 2 2 2 0 SEC-C motif DUF5326 PF17260.2 ORF101536 - 0.93 9.7 6.8 0.71 10.0 0.2 2.7 3 0 0 3 3 3 0 Family of unknown function (DUF5326) HTH_psq PF05225.16 ORF101333 - 0.066 13.0 0.1 0.88 9.4 0.0 2.3 2 0 0 2 2 2 0 helix-turn-helix, Psq domain ResIII PF04851.15 NODE_49795_length_373_cov_1.520710_g41903_i0reverse_frame_1 - 9.2e-09 35.5 0.6 1.4e-08 34.9 0.6 1.3 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 NODE_49795_length_373_cov_1.520710_g41903_i0reverse_frame_1 - 4.7e-06 26.5 0.0 5.8e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase TMEM174 PF15029.6 NODE_49782_length_373_cov_2.005917_g41890_i0forward_frame_1 - 0.026 14.3 0.6 0.03 14.0 0.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 174 LOH1CR12 PF10158.9 NODE_49781_length_373_cov_2.026627_g41889_i0reverse_frame_1 - 0.015 15.3 0.5 0.017 15.1 0.5 1.2 1 0 0 1 1 1 0 Tumour suppressor protein zinc_ribbon_4 PF13717.6 NODE_49779_length_373_cov_2.094675_g41887_i0reverse_frame_1 - 0.06 13.3 0.0 0.06 13.3 0.0 2.4 2 1 1 3 3 3 0 zinc-ribbon domain Molybdopterin_N PF18364.1 NODE_49775_length_373_cov_2.316568_g41883_i0reverse_frame_1 - 1.3e-12 47.5 0.1 3.1e-12 46.3 0.0 1.7 2 0 0 2 2 2 1 Molybdopterin oxidoreductase N-terminal domain Molybdopterin PF00384.22 NODE_49775_length_373_cov_2.316568_g41883_i0reverse_frame_1 - 2.5e-12 46.5 0.0 3.1e-12 46.2 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Retinin_C PF04527.12 NODE_49775_length_373_cov_2.316568_g41883_i0reverse_frame_1 - 0.12 12.6 0.1 0.18 12.1 0.1 1.2 1 0 0 1 1 1 0 Drosophila Retinin like protein RecT PF03837.14 NODE_49772_length_373_cov_2.544379_g41880_i0reverse_frame_1 - 0.00032 20.3 0.0 0.00033 20.2 0.0 1.1 1 0 0 1 1 1 1 RecT family DUF5538 PF17692.1 NODE_49768_length_373_cov_3.065089_g41876_i0reverse_frame_1 - 0.0084 16.2 3.2 0.012 15.6 3.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5538) NUC205 PF08168.11 NODE_49766_length_373_cov_3.112426_g41874_i0reverse_frame_1 - 0.2 11.2 1.0 0.26 10.8 0.5 1.5 1 1 0 1 1 1 0 NUC205 domain DUF72 PF01904.18 NODE_49763_length_373_cov_3.926036_g41871_i0forward_frame_1 - 1.9e-29 103.4 0.1 2e-29 103.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 DUF3267 PF11667.8 NODE_49752_length_373_cov_53.686391_g41860_i0forward_frame_1 - 2.3 8.5 9.2 0.3 11.4 3.6 2.0 1 1 0 2 2 2 0 Putative zincin peptidase SSFA2_C PF14723.6 NODE_49749_length_373_cov_65.991124_g41857_i0forward_frame_1 - 0.11 12.3 1.4 0.13 12.1 1.4 1.1 1 0 0 1 1 1 0 Sperm-specific antigen 2 C-terminus DUF3123 PF11321.8 NODE_49749_length_373_cov_65.991124_g41857_i0forward_frame_1 - 3.9 8.2 7.7 0.34 11.6 3.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3123) Seipin PF06775.14 NODE_49745_length_373_cov_68.869822_g41853_i0reverse_frame_1 - 0.71 9.9 2.8 0.44 10.6 0.1 1.8 2 0 0 2 2 2 0 Putative adipose-regulatory protein (Seipin) Glyco_transf_10 PF00852.19 NODE_49743_length_373_cov_72.985207_g41851_i0reverse_frame_1 - 0.0038 17.0 0.0 0.0046 16.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 10 (fucosyltransferase) C-term DUF5404 PF17397.2 NODE_49739_length_373_cov_76.837278_g41847_i0reverse_frame_1 - 0.13 12.4 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5404) Aldedh PF00171.22 NODE_49732_length_373_cov_89.857988_g41840_i0forward_frame_1 - 4.1e-22 78.3 0.0 5e-22 78.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family bZIP_1 PF00170.21 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.00022 21.2 10.3 0.059 13.5 5.3 2.4 1 1 1 2 2 2 2 bZIP transcription factor DUF3450 PF11932.8 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.00034 20.0 0.5 0.00034 20.0 0.5 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3450) Seryl_tRNA_N PF02403.22 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.0005 20.3 4.1 0.0005 20.3 4.1 1.8 2 0 0 2 2 2 1 Seryl-tRNA synthetase N-terminal domain She9_MDM33 PF05546.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.0011 18.9 2.1 0.0014 18.4 2.1 1.3 1 0 0 1 1 1 1 She9 / Mdm33 family DUF641 PF04859.12 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.0012 19.2 3.7 0.002 18.4 3.7 1.3 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) BRE1 PF08647.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.0025 17.9 7.2 0.0025 17.9 7.2 1.4 2 0 0 2 2 2 1 BRE1 E3 ubiquitin ligase Spc42p PF11544.8 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.028 14.4 1.6 0.028 14.4 1.6 2.4 1 1 0 2 2 2 0 Spindle pole body component Spc42p TMPIT PF07851.13 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.034 13.4 5.1 0.045 13.0 5.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4200 PF13863.6 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.04 14.3 4.8 0.052 13.9 4.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Cluap1 PF10234.9 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.046 13.1 4.7 0.055 12.9 4.7 1.1 1 0 0 1 1 1 0 Clusterin-associated protein-1 DUF1664 PF07889.12 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.061 13.4 1.9 0.081 13.0 1.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.063 13.7 5.6 4.9 7.6 0.1 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF4164 PF13747.6 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.069 13.4 0.1 0.11 12.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Herpes_UL6 PF01763.16 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.13 10.8 5.9 0.14 10.6 5.9 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Fungal_TACC PF12709.7 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.18 12.2 10.0 1.2 9.6 0.5 2.4 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins ATG16 PF08614.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.28 11.4 7.9 0.042 14.1 3.9 1.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF1640 PF07798.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.3 11.1 6.6 0.57 10.2 6.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) DUF948 PF06103.11 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.35 11.1 3.3 1.5 9.1 3.3 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) KxDL PF10241.9 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 0.58 10.5 7.3 0.3 11.4 2.4 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein HIP1_clath_bdg PF16515.5 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 4.1 8.1 9.6 6.4 7.5 8.7 1.8 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TMF_DNA_bd PF12329.8 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_1 - 9.1 6.4 16.5 1.5 8.8 3.6 2.7 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding RCC1_2 PF13540.6 NODE_49723_length_373_cov_114.292899_g41831_i0forward_frame_1 - 1.8e-05 24.4 0.6 0.13 12.1 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_49723_length_373_cov_114.292899_g41831_i0forward_frame_1 - 0.19 11.8 0.0 18 5.4 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Mfa1 PF17445.2 NODE_49721_length_373_cov_131.230769_g41829_i0reverse_frame_1 - 1.4 9.0 4.4 0.55 10.3 0.8 2.1 1 1 1 2 2 2 0 Mating factor A1 Spc7 PF08317.11 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 0.05 12.5 10.3 0.056 12.3 10.3 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Tweety PF04906.13 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 0.32 9.6 1.6 0.48 9.0 1.0 1.6 1 1 0 1 1 1 0 Tweety TMF_TATA_bd PF12325.8 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 1.4 9.2 12.9 12 6.2 9.1 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding ALMT PF11744.8 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 1.9 7.3 6.7 0.5 9.1 2.6 1.6 1 1 1 2 2 2 0 Aluminium activated malate transporter COG2 PF06148.11 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_1 - 5.7 7.0 8.7 2.6 8.1 5.3 1.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 BHD_2 PF10404.9 NODE_49716_length_373_cov_290.668639_g41824_i0forward_frame_1 - 7.7 7.6 7.8 0.5 11.3 2.2 1.8 2 0 0 2 2 2 0 Rad4 beta-hairpin domain 2 Porin_1 PF00267.21 NODE_49709_length_374_cov_1.486726_g41818_i0forward_frame_1 - 1.4e-48 166.1 7.2 1.5e-48 166.0 7.2 1.0 1 0 0 1 1 1 1 Gram-negative porin DUF4562 PF15123.6 NODE_49709_length_374_cov_1.486726_g41818_i0forward_frame_1 - 0.00023 21.1 0.0 0.00028 20.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4562) LMBR1 PF04791.16 NODE_49700_length_374_cov_2.221239_g41809_i0forward_frame_1 - 3.4e-21 75.7 10.8 3.7e-21 75.6 10.8 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein Herpes_LMP1 PF05297.11 NODE_49700_length_374_cov_2.221239_g41809_i0forward_frame_1 - 0.39 9.9 2.9 0.41 9.8 2.9 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) TPR_1 PF00515.28 NODE_49683_length_374_cov_4.823009_g41792_i0reverse_frame_1 - 0.0016 18.2 1.6 0.0026 17.5 1.6 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_49683_length_374_cov_4.823009_g41792_i0reverse_frame_1 - 0.012 15.7 1.1 0.02 15.0 1.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat UPF0242 PF06785.11 NODE_49669_length_374_cov_59.542773_g41778_i0reverse_frame_1 - 3.2 7.8 3.5 4.4 7.4 3.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus WCCH PF03716.14 NODE_49666_length_374_cov_70.076696_g41775_i0reverse_frame_1 - 0.077 12.7 2.5 0.15 11.7 2.5 1.5 1 0 0 1 1 1 0 WCCH motif ATP-synt_I PF03899.15 NODE_49662_length_374_cov_75.569322_g41771_i0reverse_frame_1 - 0.052 13.9 0.0 0.077 13.4 0.0 1.3 1 0 0 1 1 1 0 ATP synthase I chain Mcl1_mid PF12341.8 NODE_49657_length_374_cov_81.879056_g41766_i0forward_frame_1 - 0.13 11.5 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Minichromosome loss protein, Mcl1, middle region Prefoldin_2 PF01920.20 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 1.9e-21 76.0 8.3 2.7e-21 75.5 8.3 1.2 1 0 0 1 1 1 1 Prefoldin subunit DUF615 PF04751.14 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.026 14.5 1.3 0.043 13.8 1.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF615) DASH_Dad1 PF08649.10 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.036 14.3 0.3 0.21 11.8 0.1 2.0 2 0 0 2 2 2 0 DASH complex subunit Dad1 Syntaxin-18_N PF10496.9 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.041 14.1 2.1 0.34 11.2 0.0 2.1 2 0 0 2 2 2 0 SNARE-complex protein Syntaxin-18 N-terminus HOIP-UBA PF16678.5 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.068 13.2 2.7 0.09 12.8 2.7 1.1 1 0 0 1 1 1 0 HOIP UBA domain pair DASH_Spc19 PF08287.11 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.071 13.0 6.6 0.86 9.5 0.8 2.1 1 1 1 2 2 2 0 Spc19 DUF5082 PF16888.5 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.15 12.4 5.5 0.13 12.6 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) STAG PF08514.11 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.15 12.0 1.9 0.17 11.8 0.4 1.8 1 1 1 2 2 2 0 STAG domain DUF948 PF06103.11 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.46 10.8 3.0 6.6 7.1 3.0 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) FlxA PF14282.6 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.51 10.3 11.3 0.71 9.9 2.1 2.1 2 0 0 2 2 2 0 FlxA-like protein Bcr-Abl_Oligo PF09036.10 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 0.61 10.1 3.4 7.2 6.7 0.2 2.2 2 0 0 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain Spc24 PF08286.11 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 2.8 8.3 6.6 4.9 7.4 0.2 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 COG2 PF06148.11 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_1 - 4.2 7.5 7.6 6.1 6.9 1.6 2.1 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 ArsR PF09824.9 NODE_49632_length_375_cov_1.435294_g41741_i0reverse_frame_1 - 0.11 12.1 0.1 0.15 11.6 0.1 1.2 1 0 0 1 1 1 0 ArsR transcriptional regulator Rgp1 PF08737.10 NODE_49629_length_375_cov_1.523529_g41738_i0forward_frame_1 - 0.044 13.0 0.3 0.051 12.7 0.3 1.0 1 0 0 1 1 1 0 Rgp1 Pullulanase_Ins PF18494.1 NODE_49623_length_375_cov_1.829412_g41732_i0reverse_frame_1 - 0.035 14.6 0.2 0.082 13.4 0.1 1.6 1 1 1 2 2 2 0 Pullulanase Ins domain GPR_Gpa2_C PF11970.8 NODE_49623_length_375_cov_1.829412_g41732_i0forward_frame_1 - 0.038 14.0 0.3 0.07 13.2 0.3 1.5 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term Zn_Tnp_IS91 PF14319.6 NODE_49617_length_375_cov_2.058824_g41726_i0reverse_frame_1 - 0.019 15.0 8.4 0.019 15.0 8.4 2.2 1 1 1 2 2 2 0 Transposase zinc-binding domain YqhR PF11085.8 NODE_49613_length_375_cov_2.488235_g41722_i0reverse_frame_1 - 0.0035 17.3 1.1 0.0039 17.1 1.1 1.1 1 0 0 1 1 1 1 Conserved membrane protein YqhR Big_1 PF02369.16 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 2e-20 72.6 14.5 4.4e-17 61.8 5.6 2.5 3 0 0 3 3 3 2 Bacterial Ig-like domain (group 1) Invasin_D3 PF09134.10 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 1.3e-13 51.1 11.8 6.9e-12 45.5 5.7 2.0 2 0 0 2 2 2 2 Invasin, domain 3 Big_3_5 PF16640.5 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 5.9e-06 26.4 2.3 5.9e-06 26.4 2.3 2.4 1 1 1 2 2 2 1 Bacterial Ig-like domain (group 3) Glyco_hydro2_C5 PF18565.1 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.0011 18.8 2.8 0.0067 16.2 1.2 2.6 2 1 0 2 2 2 1 Glycoside hydrolase family 2 C-terminal domain 5 DUF1573 PF07610.11 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.0022 18.0 0.3 0.0031 17.5 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1573) DUF824 PF05688.11 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.0026 17.6 1.3 0.0056 16.5 1.3 1.6 1 0 0 1 1 1 1 Salmonella repeat of unknown function (DUF824) ZirS_C PF16583.5 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.0034 16.9 0.8 0.0059 16.2 0.7 1.4 1 1 0 1 1 1 1 Zinc-regulated secreted antivirulence protein C-terminal domain MG4 PF17789.1 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.014 15.5 2.8 0.43 10.8 0.2 2.3 2 1 0 2 2 2 0 Macroglobulin domain MG4 Ashwin PF15323.6 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.02 14.9 0.2 0.024 14.7 0.2 1.1 1 0 0 1 1 1 0 Developmental protein CBM_X2 PF03442.14 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_1 - 0.24 11.6 6.1 0.92 9.7 0.8 2.9 1 1 1 2 2 2 0 Carbohydrate binding domain X2 His_Phos_2 PF00328.22 NODE_49608_length_375_cov_2.694118_g41717_i0forward_frame_1 - 0.016 14.5 0.0 0.019 14.3 0.0 1.0 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) tRNA-synt_2c PF01411.19 NODE_49602_length_375_cov_3.808824_g41711_i0reverse_frame_1 - 2.1e-06 26.6 0.0 2.7e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) PEN-2 PF10251.9 NODE_49602_length_375_cov_3.808824_g41711_i0forward_frame_1 - 0.012 16.0 0.4 0.023 15.1 0.1 1.6 1 1 1 2 2 2 0 Presenilin enhancer-2 subunit of gamma secretase Lamprin PF06403.11 NODE_49599_length_375_cov_9.941176_g41708_i0forward_frame_1 - 7.8 6.5 11.5 2.2 8.2 6.1 1.9 1 1 1 2 2 2 0 Lamprin RNF111_N PF15303.6 NODE_49581_length_375_cov_81.017647_g41690_i0forward_frame_1 - 1 9.1 5.5 1.1 9.0 4.3 1.6 1 1 0 1 1 1 0 E3 ubiquitin-protein ligase Arkadia N-terminus ubiquitin PF00240.23 NODE_49575_length_375_cov_100.861765_g41684_i0reverse_frame_1 - 0.025 14.3 0.0 0.044 13.5 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family AbrB-like PF14250.6 NODE_49575_length_375_cov_100.861765_g41684_i0reverse_frame_1 - 0.076 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 AbrB-like transcriptional regulator RCC1_2 PF13540.6 NODE_49575_length_375_cov_100.861765_g41684_i0reverse_frame_1 - 0.08 12.8 3.8 0.63 9.9 1.2 2.5 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Rho_RNA_bind PF07497.12 NODE_49575_length_375_cov_100.861765_g41684_i0reverse_frame_1 - 0.13 12.1 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain DM4_12 PF07841.13 NODE_49565_length_375_cov_400.594118_g41674_i0reverse_frame_1 - 0.033 14.9 1.8 0.089 13.5 0.7 2.0 2 0 0 2 2 2 0 DM4/DM12 family DUF1980 PF09323.10 NODE_49558_length_375_cov_56763.582353_g41667_i0forward_frame_1 - 2.5 8.0 6.3 3.6 7.5 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) ALG3 PF05208.13 NODE_49556_length_376_cov_1.545455_g41665_i0forward_frame_2 - 8.2e-20 71.5 5.9 8.9e-20 71.4 5.9 1.0 1 0 0 1 1 1 1 ALG3 protein Neurokinin_B PF03823.14 NODE_49553_length_376_cov_1.724340_g41662_i0reverse_frame_2 - 0.061 13.4 0.1 0.68 10.0 0.0 2.2 1 1 1 2 2 2 0 Neurokinin B Urotensin_II PF02083.15 NODE_49544_length_376_cov_2.258065_g41653_i0reverse_frame_3 - 6.6 6.6 12.2 1.7 8.5 1.2 2.9 2 0 0 2 2 2 0 Urotensin II adh_short_C2 PF13561.6 NODE_49542_length_376_cov_2.653959_g41651_i0forward_frame_3 - 4.9e-24 85.2 0.0 5.2e-24 85.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 NODE_49542_length_376_cov_2.653959_g41651_i0forward_frame_3 - 2.5e-21 76.0 0.0 3.3e-21 75.6 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase SusD-like_3 PF14322.6 NODE_49540_length_376_cov_2.730205_g41649_i0reverse_frame_3 - 0.068 13.5 0.1 0.078 13.3 0.1 1.2 1 0 0 1 1 1 0 Starch-binding associating with outer membrane cNMP_binding PF00027.29 NODE_49540_length_376_cov_2.730205_g41649_i0forward_frame_3 - 5.1e-07 29.7 0.0 9.6e-07 28.8 0.0 1.5 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain GAS PF13851.6 NODE_49538_length_376_cov_2.894428_g41647_i0reverse_frame_3 - 0.011 15.2 0.6 0.013 14.8 0.6 1.3 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding DUF641 PF04859.12 NODE_49538_length_376_cov_2.894428_g41647_i0reverse_frame_3 - 0.012 15.9 0.4 0.016 15.5 0.4 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Bap31_Bap29_C PF18035.1 NODE_49538_length_376_cov_2.894428_g41647_i0reverse_frame_3 - 0.013 15.4 1.0 0.026 14.5 1.0 1.5 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain Csm1_N PF18504.1 NODE_49538_length_376_cov_2.894428_g41647_i0reverse_frame_3 - 0.056 13.8 1.6 0.1 13.0 0.8 1.8 1 1 1 2 2 2 0 Csm1 N-terminal domain CDC50 PF03381.15 NODE_49534_length_376_cov_3.489736_g41643_i0forward_frame_2 - 0.094 12.2 0.0 0.094 12.2 0.0 1.1 1 0 0 1 1 1 0 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF1694 PF07997.11 NODE_49532_length_376_cov_3.753666_g41641_i0reverse_frame_2 - 0.35 11.0 3.9 1.1 9.3 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1694) zf-CCCH_3 PF15663.5 NODE_49528_length_376_cov_10.982405_g41637_i0reverse_frame_3 - 0.061 13.5 0.1 0.081 13.1 0.1 1.2 1 0 0 1 1 1 0 Zinc-finger containing family V4R PF02830.18 NODE_49528_length_376_cov_10.982405_g41637_i0forward_frame_2 - 0.2 11.7 6.2 0.32 11.0 6.2 1.4 1 0 0 1 1 1 0 V4R domain Actin PF00022.19 NODE_49515_length_376_cov_70.950147_g41624_i0forward_frame_3 - 0.00019 20.2 0.0 0.00044 19.0 0.0 1.6 1 1 0 1 1 1 1 Actin PEP_mutase PF13714.6 NODE_49513_length_376_cov_76.378299_g41622_i0reverse_frame_2 - 0.014 14.8 0.7 0.017 14.6 0.7 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase 2OG-FeII_Oxy_3 PF13640.6 NODE_49512_length_376_cov_78.938416_g41621_i0forward_frame_2 - 9.2e-05 23.3 0.0 0.00011 23.0 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily UL42 PF17638.2 NODE_49508_length_376_cov_86.501466_g41617_i0forward_frame_3 - 0.078 13.0 0.4 0.1 12.6 0.4 1.2 1 0 0 1 1 1 0 HCMV UL42 ThiC-associated PF13667.6 NODE_49503_length_376_cov_95.976540_g41612_i0reverse_frame_2 - 0.13 12.1 0.0 14 5.6 0.0 2.2 2 0 0 2 2 2 0 ThiC-associated domain L_biotic_typeA PF04604.13 NODE_49499_length_376_cov_136.950147_g41608_i0reverse_frame_2 - 0.032 14.1 0.1 0.07 13.0 0.1 1.5 1 0 0 1 1 1 0 Type-A lantibiotic PDZ PF00595.24 NODE_49499_length_376_cov_136.950147_g41608_i0reverse_frame_2 - 0.056 13.8 0.0 0.091 13.1 0.0 1.3 1 0 0 1 1 1 0 PDZ domain PDZ_6 PF17820.1 NODE_49499_length_376_cov_136.950147_g41608_i0reverse_frame_2 - 0.098 12.5 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 PDZ domain Endomucin PF07010.12 NODE_49499_length_376_cov_136.950147_g41608_i0forward_frame_3 - 0.12 12.3 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Endomucin DUF92 PF01940.16 NODE_49495_length_376_cov_196.434018_g41604_i0forward_frame_2 - 0.17 11.3 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein DUF92 Pep1_7 PF17232.2 NODE_49494_length_376_cov_206.413490_g41603_i0forward_frame_3 - 0.036 14.5 0.1 0.072 13.6 0.1 1.4 1 0 0 1 1 1 0 Elicitor peptide 1-7 PAN_3 PF08277.12 NODE_49494_length_376_cov_206.413490_g41603_i0forward_frame_3 - 0.07 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 PAN-like domain zf-RING_2 PF13639.6 NODE_49494_length_376_cov_206.413490_g41603_i0forward_frame_3 - 0.11 12.8 1.3 0.21 11.9 1.3 1.5 1 0 0 1 1 1 0 Ring finger domain zf-NADH-PPase PF09297.11 NODE_49493_length_376_cov_426.832845_g41602_i0forward_frame_2 - 0.013 15.2 2.7 0.013 15.1 0.2 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Ig_J_chain PF15097.6 NODE_49493_length_376_cov_426.832845_g41602_i0forward_frame_2 - 0.56 10.1 5.2 0.8 9.6 4.1 1.7 1 1 1 2 2 2 0 Immunoglobulin J chain EF-hand_1 PF00036.32 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_3 - 7.2e-06 25.2 0.1 1.5e-05 24.2 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_3 - 0.0006 19.6 0.0 0.0035 17.2 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_3 - 0.0006 19.2 2.1 0.001 18.5 0.2 2.2 2 1 1 3 3 3 1 EF hand EF-hand_7 PF13499.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_3 - 0.0036 17.7 0.0 0.0067 16.9 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_2 - 0.0019 17.6 0.2 0.003 17.0 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_2 - 0.0083 16.0 0.1 0.018 14.9 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_49490_length_376_cov_17657.255132_g34556_i5reverse_frame_2 - 0.044 14.2 0.0 0.06 13.8 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair OAD_beta PF03977.13 NODE_49489_length_377_cov_1.181287_g41599_i0reverse_frame_2 - 0.058 12.4 11.1 0.068 12.2 11.1 1.1 1 0 0 1 1 1 0 Na+-transporting oxaloacetate decarboxylase beta subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks209.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks209.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks209.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks209.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DEFB136 PF17333.2 ORF2203 - 5.7 7.0 6.9 28 4.7 1.1 2.6 2 0 0 2 2 2 0 Beta defensin 136 PARP PF00644.20 ORF20945 - 6.7e-08 32.3 0.0 4e-07 29.8 0.0 2.0 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain p450 PF00067.22 ORF140031 - 3.7e-47 161.1 0.0 6.7e-47 160.3 0.0 1.3 1 0 0 1 1 1 1 Cytochrome P450 DUF2418 PF10332.9 ORF140031 - 0.05 14.1 1.8 2.8 8.5 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2418) p450 PF00067.22 ORF134563 - 4.4e-47 160.9 0.2 6.5e-47 160.3 0.2 1.2 1 0 0 1 1 1 1 Cytochrome P450 Spore_YhaL PF14147.6 ORF134563 - 0.41 10.4 2.8 5.4 6.8 0.0 3.1 3 0 0 3 3 3 0 Sporulation protein YhaL Pyrophosphatase PF00719.19 ORF134482 - 2.1e-31 108.9 0.0 2.9e-31 108.5 0.0 1.2 1 0 0 1 1 1 1 Inorganic pyrophosphatase Citrate_synt PF00285.21 ORF129265 - 8e-123 410.1 0.0 1e-122 409.7 0.0 1.1 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain TMEM154 PF15102.6 ORF123549 - 0.00016 21.6 1.9 0.00016 21.6 1.9 2.4 3 0 0 3 3 3 1 TMEM154 protein family Shisa PF13908.6 ORF123549 - 0.0049 17.1 0.6 0.01 16.1 0.6 1.6 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator EssA PF10661.9 ORF123549 - 0.077 12.8 1.7 0.14 12.0 1.7 1.4 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA Podoplanin PF05808.11 ORF123549 - 0.11 12.6 8.2 0.27 11.3 8.2 1.7 1 0 0 1 1 1 0 Podoplanin Orf78 PF06024.12 ORF123549 - 0.12 12.7 0.2 0.29 11.5 0.2 1.7 1 0 0 1 1 1 0 Orf78 (ac78) Alpha_GJ PF03229.13 ORF123549 - 0.62 10.6 6.6 0.22 12.1 2.8 2.3 2 1 0 2 2 2 0 Alphavirus glycoprotein J ECSCR PF15820.5 ORF123549 - 3.3 7.6 8.4 0.95 9.3 3.0 2.6 2 1 1 3 3 3 0 Endothelial cell-specific chemotaxis regulator p450 PF00067.22 ORF121537 - 5.5e-75 252.9 0.0 7.2e-75 252.5 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Metallophos PF00149.28 ORF98913 - 5.1e-16 59.8 2.9 1e-15 58.8 2.9 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Radical_SAM PF04055.21 ORF98913 - 0.024 15.0 0.0 0.6 10.5 0.0 2.5 2 0 0 2 2 2 0 Radical SAM superfamily AAA_16 PF13191.6 ORF78895 - 4.5e-05 23.9 0.0 0.00015 22.2 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 ORF78895 - 0.00028 20.9 0.0 0.00052 20.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 ORF78895 - 0.00039 20.7 0.0 0.00075 19.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 ORF78895 - 0.0023 17.9 0.0 0.0036 17.2 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_28 PF13521.6 ORF78895 - 0.013 15.7 0.0 0.028 14.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 ORF78895 - 0.013 15.6 0.0 0.028 14.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_18 PF13238.6 ORF78895 - 0.014 15.9 0.0 0.029 14.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 ORF78895 - 0.015 14.7 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 ORF78895 - 0.02 14.6 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.22 ORF78895 - 0.025 15.0 0.0 0.044 14.2 0.0 1.3 1 0 0 1 1 1 0 RNA helicase NB-ARC PF00931.22 ORF78895 - 0.026 13.7 0.0 0.046 12.9 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 ORF78895 - 0.039 13.7 0.0 0.1 12.4 0.0 1.6 2 0 0 2 2 1 0 P-loop containing region of AAA domain AAA_33 PF13671.6 ORF78895 - 0.044 13.9 0.1 0.12 12.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF78895 - 0.046 13.6 0.0 0.072 13.0 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 ORF78895 - 0.058 13.4 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 ORF78895 - 0.058 13.9 0.0 0.15 12.6 0.0 1.6 2 0 0 2 2 1 0 ABC transporter AAA_23 PF13476.6 ORF78895 - 0.077 13.5 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF78895 - 0.13 12.7 0.0 0.24 11.8 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Metallophos PF00149.28 ORF56271 - 5.1e-16 59.8 2.9 1e-15 58.8 2.9 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Radical_SAM PF04055.21 ORF56271 - 0.024 15.0 0.0 0.6 10.5 0.0 2.5 2 0 0 2 2 2 0 Radical SAM superfamily F5_F8_type_C PF00754.25 ORF5080 - 6.9e-26 90.8 3.8 6.1e-13 49.0 0.0 2.8 3 0 0 3 3 3 2 F5/8 type C domain Mucin PF01456.17 ORF5080 - 0.013 15.5 15.7 0.013 15.5 15.7 3.7 4 0 0 4 4 4 0 Mucin-like glycoprotein Sugar_tr PF00083.24 ORF36491 - 1.4e-13 50.6 16.9 2.8e-13 49.5 16.9 1.5 1 0 0 1 1 1 1 Sugar (and other) transporter C2 PF00168.30 ORF3583 - 2.8e-26 91.8 0.0 1.6e-16 60.5 0.0 4.3 3 1 1 4 4 4 4 C2 domain Rdx PF10262.9 ORF150442 - 0.0018 18.4 0.1 0.012 15.7 0.0 2.3 2 0 0 2 2 2 1 Rdx family PAS_9 PF13426.7 ORF150442 - 0.091 13.0 0.2 0.47 10.7 0.0 2.1 2 0 0 2 2 2 0 PAS domain TPH PF13868.6 ORF143881 - 3.5e-68 229.7 145.3 3.5e-68 229.7 145.3 2.1 2 0 0 2 2 2 1 Trichohyalin-plectin-homology domain RITA PF17066.5 ORF143881 - 0.018 14.7 0.1 0.018 14.7 0.1 2.2 2 0 0 2 2 2 0 RBPJ-interacting and tubulin associated protein Sugar_tr PF00083.24 ORF129404 - 2.1e-52 178.5 12.2 3.8e-26 91.9 0.4 2.1 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF129404 - 4.2e-25 88.4 1.7 4.2e-25 88.4 1.7 2.2 1 1 1 2 2 2 1 Major Facilitator Superfamily ADP_PFK_GK PF04587.15 ORF127884 - 1.1e-60 205.4 0.9 1.3e-60 205.2 0.9 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region Amidase PF01425.21 ORF127832 - 2.6e-81 273.9 0.0 3.3e-81 273.6 0.0 1.1 1 0 0 1 1 1 1 Amidase TPH PF13868.6 ORF120751 - 3.5e-68 229.7 145.3 3.5e-68 229.7 145.3 2.1 2 0 0 2 2 2 1 Trichohyalin-plectin-homology domain RITA PF17066.5 ORF120751 - 0.018 14.7 0.1 0.018 14.7 0.1 2.2 2 0 0 2 2 2 0 RBPJ-interacting and tubulin associated protein DnaJ PF00226.31 ORF101460 - 0.00048 20.2 0.2 0.00048 20.2 0.2 2.0 2 0 0 2 2 2 1 DnaJ domain Mfa2 PF08842.10 ORF101460 - 0.016 14.8 0.7 0.029 14.0 0.7 1.3 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 DUF835 PF05763.12 ORF101460 - 0.1 12.3 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF835) ZZ PF00569.17 ORF96158 - 7.5e-09 35.3 3.9 2.1e-08 33.9 3.9 1.8 1 0 0 1 1 1 1 Zinc finger, ZZ type WW PF00397.26 ORF96158 - 1.5e-08 34.6 0.1 3e-08 33.6 0.1 1.6 1 0 0 1 1 1 1 WW domain Glyco_hyd_101C PF17451.2 ORF96158 - 0.075 13.3 0.3 0.075 13.3 0.3 2.2 2 0 0 2 2 2 0 Glycosyl hydrolase 101 beta sandwich domain ATP-synt_ab PF00006.25 ORF8922 - 1e-73 247.5 0.1 1.8e-73 246.7 0.1 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 ORF8922 - 7.6e-46 155.5 0.7 1.4e-45 154.6 0.7 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 ORF8922 - 5.3e-13 49.3 0.1 1.2e-12 48.1 0.1 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain ATPase PF06745.13 ORF8922 - 9.8e-05 21.8 0.1 0.00017 21.0 0.1 1.4 1 0 0 1 1 1 1 KaiC ATPase_2 PF01637.18 ORF8922 - 0.0084 16.0 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea HAS-barrel PF09378.10 ORF8922 - 0.016 15.4 0.1 0.075 13.2 0.0 2.2 2 1 0 2 2 2 0 HAS barrel domain PPL4 PF18188.1 ORF8259 - 4.7e-05 23.4 0.2 0.069 13.1 0.0 2.3 2 0 0 2 2 2 2 Prim-pol 4 Nucleoplasmin PF03066.15 ORF8073 - 0.81 10.2 4.8 4.3 7.9 0.2 2.9 2 0 0 2 2 2 0 Nucleoplasmin/nucleophosmin domain Pro_sub2 PF18513.1 ORF8073 - 1.9 8.7 9.3 0.16 12.1 0.6 3.6 4 0 0 4 4 4 0 Prodomain subtilisin 2 MatE PF01554.18 ORF6158 - 2.6e-51 173.5 32.9 4.6e-27 94.6 13.3 3.0 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.6 ORF6158 - 3.7e-07 30.3 14.4 3.7e-07 30.3 14.4 4.1 2 1 2 4 4 4 1 Polysaccharide biosynthesis C-terminal domain UQ_con PF00179.26 ORF53341 - 5.5e-05 22.8 0.0 0.00015 21.5 0.0 1.7 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme FAD_binding_6 PF00970.24 ORF51544 - 2e-07 31.3 0.0 6.5e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF51544 - 0.00011 22.8 0.0 0.0028 18.3 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF51544 - 0.0026 17.9 0.1 0.024 14.8 0.0 2.4 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Pkinase PF00069.25 ORF46245 - 5e-50 170.3 0.0 7.1e-50 169.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46245 - 1.4e-34 119.6 0.0 1.8e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF46245 - 3.1e-06 26.7 0.0 6.1e-06 25.8 0.0 1.5 1 0 0 1 1 1 1 Kinase-like p450 PF00067.22 ORF45376 - 1.7e-50 172.1 1.1 2.5e-50 171.6 1.1 1.2 1 0 0 1 1 1 1 Cytochrome P450 EF-hand_7 PF13499.6 ORF33257 - 4.8e-24 84.6 7.6 1.5e-15 57.4 0.4 3.3 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF33257 - 2.8e-18 64.2 2.6 8.1e-05 22.3 0.1 4.7 4 0 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF33257 - 1.2e-17 62.0 4.8 2.2e-06 26.8 0.1 4.9 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF33257 - 6.9e-15 54.6 6.9 2.2e-11 43.4 0.2 4.5 2 2 2 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF33257 - 1.4e-12 46.5 3.7 4.7e-05 22.7 0.1 4.7 4 0 0 4 4 4 2 EF hand TerB PF05099.13 ORF33257 - 0.0032 17.4 0.1 0.07 13.1 0.0 2.4 2 0 0 2 2 2 1 Tellurite resistance protein TerB SurA_N_3 PF13624.6 ORF33257 - 0.021 14.6 0.9 0.12 12.1 0.0 2.6 2 1 0 2 2 2 0 SurA N-terminal domain RST PF12174.8 ORF33257 - 0.068 13.1 0.0 0.34 10.9 0.0 2.1 2 0 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain SPARC_Ca_bdg PF10591.9 ORF33257 - 0.19 12.1 2.4 1.2 9.4 0.0 3.1 3 1 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF33257 - 0.21 11.5 2.4 4.8 7.1 0.1 3.2 2 1 2 4 4 4 0 Caleosin related protein FAD_binding_6 PF00970.24 ORF29013 - 2e-07 31.3 0.0 6.5e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF29013 - 0.00011 22.8 0.0 0.0028 18.3 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF29013 - 0.0026 17.9 0.1 0.024 14.8 0.0 2.4 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Mannitol_dh_C PF08125.13 ORF149027 - 7.9e-71 238.4 0.0 1.2e-70 237.8 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 ORF149027 - 1.5e-27 96.6 0.1 2.9e-27 95.7 0.1 1.5 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain 3HCDH_N PF02737.18 ORF149027 - 0.023 14.6 0.2 0.063 13.2 0.2 1.7 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AfaD PF05775.12 ORF149027 - 0.13 12.7 0.1 0.29 11.6 0.1 1.6 1 0 0 1 1 1 0 Enterobacteria AfaD invasin protein Rcd1 PF04078.13 ORF131349 - 1.5e-101 339.1 7.5 2e-101 338.7 7.5 1.1 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like RESP18 PF14948.6 ORF131349 - 0.11 12.8 1.1 0.32 11.3 1.1 1.8 1 0 0 1 1 1 0 RESP18 domain Thioredoxin_6 PF13848.6 ORF114102 - 1.6e-13 51.0 0.0 1.8e-12 47.6 0.0 2.4 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 ORF114102 - 0.025 14.6 0.0 1.6 8.7 0.0 3.1 3 0 0 3 3 3 0 Thioredoxin SIS PF01380.22 ORF10895 - 2.6e-29 101.7 0.2 2.7e-16 59.6 0.0 2.4 2 0 0 2 2 2 2 SIS domain GATase_7 PF13537.6 ORF10895 - 2.3e-07 30.8 0.0 4.8e-07 29.7 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain bact-PGI_C PF10432.9 ORF10895 - 7e-05 22.9 0.0 0.00019 21.5 0.0 1.7 2 0 0 2 2 2 1 Bacterial phospho-glucose isomerase C-terminal SIS domain GATase_6 PF13522.6 ORF10895 - 0.0085 16.3 0.0 0.023 14.9 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain FAD_binding_6 PF00970.24 ORF102358 - 2e-07 31.3 0.0 6.5e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF102358 - 0.00011 22.8 0.0 0.0028 18.3 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF102358 - 0.0026 17.9 0.1 0.024 14.8 0.0 2.4 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase FAD_binding_6 PF00970.24 ORF102273 - 2e-07 31.3 0.0 6.5e-07 29.6 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF102273 - 0.00011 22.8 0.0 0.0028 18.3 0.0 2.3 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Putative_PNPOx PF01243.20 ORF102273 - 0.0026 17.9 0.1 0.024 14.8 0.0 2.4 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Glyco_hydro_63 PF03200.16 ORF101069 - 1.4e-09 37.3 6.0 2.2e-05 23.5 0.1 5.1 5 1 0 5 5 5 2 Glycosyl hydrolase family 63 C-terminal domain TPR_2 PF07719.17 ORF87535 - 1.6e-21 74.6 14.2 0.00014 21.7 0.3 6.8 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_16 PF13432.6 ORF87535 - 1.4e-18 67.2 19.8 7.8e-08 32.8 1.7 4.7 3 1 1 4 4 4 4 Tetratricopeptide repeat DnaJ PF00226.31 ORF87535 - 1.1e-17 63.9 0.3 3.2e-17 62.4 0.3 1.9 1 0 0 1 1 1 1 DnaJ domain TPR_19 PF14559.6 ORF87535 - 1.6e-16 60.6 7.7 2.7e-06 27.8 0.1 4.5 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF87535 - 1.7e-14 52.9 15.8 0.00039 20.1 0.4 5.5 6 0 0 6 6 5 3 Tetratricopeptide repeat TPR_17 PF13431.6 ORF87535 - 2.5e-11 43.1 2.1 0.049 14.0 0.0 4.9 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF87535 - 4.4e-11 42.6 27.1 0.0076 17.0 1.1 7.3 3 3 4 7 7 7 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF87535 - 1.2e-09 37.7 2.1 0.0049 16.5 0.1 5.8 5 1 1 6 6 6 2 TPR repeat TPR_8 PF13181.6 ORF87535 - 1e-08 34.7 5.3 0.088 13.1 0.1 4.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF87535 - 2e-06 28.0 15.1 0.0015 18.8 1.5 5.0 3 1 0 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF87535 - 2e-05 24.7 3.3 0.19 12.0 0.0 3.6 3 1 1 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_MalT PF17874.1 ORF87535 - 3.7e-05 23.3 4.7 0.00055 19.4 0.5 2.3 1 1 0 2 2 2 2 MalT-like TPR region TPR_4 PF07721.14 ORF87535 - 0.00013 22.2 25.9 0.024 15.2 4.2 5.9 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF87535 - 0.0005 20.5 15.9 1.2 9.9 0.1 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF87535 - 0.0032 17.6 1.5 0.0032 17.6 1.5 5.0 4 2 1 5 5 5 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF87535 - 0.014 15.5 0.2 0.14 12.3 0.0 2.7 3 1 1 4 4 3 0 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 ORF87535 - 0.016 15.2 10.4 0.55 10.4 0.0 4.8 5 0 0 5 5 4 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF87535 - 0.22 11.9 7.2 6.6 7.1 0.0 4.1 2 1 2 5 5 4 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF87535 - 1.3 9.0 20.4 0.84 9.6 0.4 5.6 6 0 0 6 6 6 0 Tetratricopeptide repeat ADH_N PF08240.12 ORF69768 - 1.4e-31 108.6 2.5 2.9e-31 107.6 2.5 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Aminotran_1_2 PF00155.21 ORF69768 - 3.6e-30 105.3 0.0 5.5e-30 104.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II ADH_zinc_N PF00107.26 ORF69768 - 4.4e-27 94.6 0.1 9.3e-27 93.6 0.1 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF69768 - 2.9e-07 30.2 0.1 6.4e-07 29.1 0.1 1.5 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF69768 - 2e-05 25.7 0.0 6.2e-05 24.1 0.0 1.9 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 ORF69768 - 0.00064 19.1 0.3 0.00064 19.1 0.3 1.6 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 ORF69768 - 0.015 14.5 0.2 0.027 13.7 0.2 1.3 1 0 0 1 1 1 0 FAD binding domain HI0933_like PF03486.14 ORF69768 - 0.016 14.0 0.3 0.024 13.3 0.3 1.2 1 0 0 1 1 1 0 HI0933-like protein RraB PF06877.11 ORF69768 - 0.039 14.7 0.0 0.25 12.1 0.0 2.3 3 0 0 3 3 2 0 Regulator of ribonuclease activity B 3HCDH_RFF PF18321.1 ORF69768 - 0.04 14.3 0.3 10 6.7 0.0 2.7 3 0 0 3 3 2 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FAD_oxidored PF12831.7 ORF69768 - 0.047 13.0 1.4 0.075 12.4 1.4 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF69768 - 0.05 12.7 1.0 0.061 12.4 0.3 1.5 2 0 0 2 2 2 0 FAD binding domain Pyr_redox_3 PF13738.6 ORF69768 - 0.061 12.6 0.1 0.1 11.9 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF69768 - 0.16 12.6 1.0 0.56 10.8 0.4 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Act-Frag_cataly PF09192.10 ORF57582 - 1.4e-33 116.5 0.9 2.6e-33 115.6 0.9 1.4 1 0 0 1 1 1 1 Actin-fragmin kinase, catalytic HMw1_D2 PF18254.1 ORF57582 - 0.057 13.8 0.1 0.28 11.6 0.0 2.2 2 0 0 2 2 2 0 HMW1 domain 2 Sec1 PF00995.23 ORF543 - 3.6e-48 165.2 0.0 7.5e-48 164.1 0.0 1.5 1 1 0 1 1 1 1 Sec1 family WI12 PF07107.11 ORF543 - 0.002 18.2 0.3 0.0036 17.4 0.3 1.4 1 0 0 1 1 1 1 Wound-induced protein WI12 UCH PF00443.29 ORF49505 - 1.5e-43 149.2 13.3 1.5e-43 149.2 13.3 2.0 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF49505 - 2.3e-11 43.9 18.7 2.3e-11 43.9 18.7 2.9 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase AAL_decarboxy PF03306.13 ORF49505 - 0.11 11.8 2.7 5.5 6.2 0.1 2.4 2 0 0 2 2 2 0 Alpha-acetolactate decarboxylase DUF5472 PF17566.2 ORF49505 - 2.1 8.3 5.3 9.5 6.3 0.0 3.3 3 0 0 3 3 3 0 Family of unknown function (DUF5472) ABC_tran PF00005.27 ORF40864 - 2.6e-30 105.7 0.0 5.1e-30 104.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF40864 - 2e-23 83.4 1.1 3.1e-23 82.8 1.1 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF40864 - 1.1e-07 31.6 0.0 3e-07 30.1 0.0 1.7 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF40864 - 0.00025 21.4 0.4 0.00098 19.5 0.4 2.0 1 1 0 1 1 1 1 AAA ATPase domain SbcCD_C PF13558.6 ORF40864 - 0.003 17.7 0.5 0.046 13.9 0.5 2.6 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 ORF40864 - 0.003 17.8 0.1 0.056 13.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF40864 - 0.009 15.2 0.0 0.016 14.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_25 PF13481.6 ORF40864 - 0.025 14.1 0.3 0.055 13.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 ORF40864 - 0.033 14.6 1.0 2.8 8.4 1.0 2.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 ORF40864 - 0.038 13.7 0.0 0.067 12.9 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family RsgA_GTPase PF03193.16 ORF40864 - 0.043 13.7 0.8 0.079 12.9 0.2 1.6 2 0 0 2 2 2 0 RsgA GTPase AAA_29 PF13555.6 ORF40864 - 0.073 12.8 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 ORF40864 - 0.098 12.7 0.2 0.47 10.4 0.1 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF40864 - 0.13 12.8 0.6 0.93 10.0 0.4 2.3 1 1 1 2 2 2 0 AAA domain Rad17 PF03215.15 ORF40864 - 0.14 12.1 0.1 0.69 9.8 0.1 1.9 2 0 0 2 2 2 0 Rad17 P-loop domain MMR_HSR1 PF01926.23 ORF40864 - 0.16 12.1 0.0 0.44 10.7 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 ORF40864 - 0.17 11.2 0.1 0.39 9.9 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.12 ORF40864 - 0.22 11.4 0.8 1.7 8.5 0.0 2.4 3 0 0 3 3 3 0 NACHT domain CC2-LZ PF16516.5 ORF35471 - 0.013 15.8 5.4 0.013 15.8 5.4 6.9 4 2 1 7 7 7 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator KIF1B PF12423.8 ORF35471 - 0.14 12.6 4.3 3.9 8.0 1.4 3.4 2 0 0 2 2 2 0 Kinesin protein 1B QIL1 PF15884.5 ORF35471 - 0.36 11.4 4.7 1 10.0 0.2 3.6 3 0 0 3 3 3 0 MICOS complex subunit MIC13, QIL1 Tnp_22_trimer PF17489.2 ORF35471 - 7.9 6.5 21.1 0.081 12.9 1.2 4.4 3 0 0 3 3 3 0 L1 transposable element trimerization domain Asp PF00026.23 ORF16617 - 1.9e-14 53.8 0.0 6.2e-14 52.1 0.0 1.8 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF16617 - 0.0024 17.6 0.0 0.0046 16.7 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Macro PF01661.21 ORF103303 - 3e-32 111.1 0.0 9.9e-32 109.5 0.0 2.0 1 0 0 1 1 1 1 Macro domain DUF3450 PF11932.8 ORF103303 - 1.5 8.1 20.8 0.055 12.8 13.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF1664 PF07889.12 ORF103303 - 2.9 8.0 10.4 18 5.4 10.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Peptidase_M3 PF01432.20 ORF97235 - 1.4e-52 179.5 0.0 1.8e-52 179.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M3 MFS_1 PF07690.16 ORF97191 - 2.7e-40 138.4 44.7 2.3e-32 112.3 18.8 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily SieB PF14163.6 ORF97191 - 0.0021 17.6 0.4 0.009 15.5 0.0 2.2 2 0 0 2 2 2 1 Super-infection exclusion protein B Squash PF00299.18 ORF97191 - 0.12 12.5 0.2 0.34 11.0 0.2 1.8 1 0 0 1 1 1 0 Squash family serine protease inhibitor MotB_plug PF13677.6 ORF97191 - 0.95 9.1 6.1 16 5.2 0.1 2.6 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB Rft-1 PF04506.13 ORF95655 - 1.6e-75 254.8 42.1 2e-75 254.5 42.1 1.0 1 0 0 1 1 1 1 Rft protein Polysacc_synt PF01943.17 ORF95655 - 0.049 13.0 32.2 0.08 12.3 14.6 3.6 1 1 1 3 3 3 0 Polysaccharide biosynthesis protein MFS_1 PF07690.16 ORF92987 - 2e-15 56.6 8.9 2e-15 56.6 8.9 2.3 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF92987 - 7.4e-09 35.0 8.5 7.4e-09 35.0 8.5 3.3 3 1 1 4 4 4 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF78398 - 2.7e-40 138.4 44.7 2.3e-32 112.3 18.8 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily SieB PF14163.6 ORF78398 - 0.0021 17.6 0.4 0.009 15.5 0.0 2.2 2 0 0 2 2 2 1 Super-infection exclusion protein B Squash PF00299.18 ORF78398 - 0.12 12.5 0.2 0.34 11.0 0.2 1.8 1 0 0 1 1 1 0 Squash family serine protease inhibitor MotB_plug PF13677.6 ORF78398 - 0.95 9.1 6.1 16 5.2 0.1 2.6 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB bZIP_Maf PF03131.17 ORF66985 - 0.17 12.4 7.0 0.39 11.3 7.0 1.6 1 0 0 1 1 1 0 bZIP Maf transcription factor Tim44 PF04280.15 ORF59049 - 8.8e-19 68.1 0.1 8.8e-19 68.1 0.1 3.0 4 1 0 4 4 4 1 Tim44-like domain DUF2321 PF10083.9 ORF59049 - 6.6 6.3 8.5 0.87 9.2 0.6 3.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2321) Baculo_PEP_C PF04513.12 ORF27062 - 0.00022 21.3 7.9 0.068 13.2 0.4 3.3 1 1 3 4 4 4 3 Baculovirus polyhedron envelope protein, PEP, C terminus DUF948 PF06103.11 ORF27062 - 0.0003 21.0 13.6 0.67 10.2 0.4 4.1 3 1 1 4 4 4 3 Bacterial protein of unknown function (DUF948) BCAS2 PF05700.11 ORF27062 - 0.0017 18.1 0.5 0.0017 18.1 0.5 3.8 2 1 0 2 2 2 1 Breast carcinoma amplified sequence 2 (BCAS2) Spc7 PF08317.11 ORF27062 - 0.021 13.7 35.1 0.16 10.8 14.4 2.6 1 1 2 3 3 3 0 Spc7 kinetochore protein Fib_alpha PF08702.10 ORF27062 - 0.024 14.8 16.4 0.48 10.6 2.6 3.2 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family Borrelia_lipo_1 PF05714.11 ORF27062 - 0.056 13.2 3.5 2.3 7.9 0.1 3.2 2 1 1 3 3 3 0 Borrelia burgdorferi virulent strain associated lipoprotein PqqD PF05402.12 ORF27062 - 0.06 13.7 3.1 6.9 7.1 0.0 4.1 3 2 0 3 3 3 0 Coenzyme PQQ synthesis protein D (PqqD) HMMR_N PF15905.5 ORF27062 - 0.091 12.2 32.3 0.024 14.1 8.1 2.2 1 1 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal ApoLp-III PF07464.11 ORF27062 - 0.59 10.2 21.5 5.6 7.1 1.3 3.1 2 1 1 3 3 3 0 Apolipophorin-III precursor (apoLp-III) Sec34 PF04136.15 ORF27062 - 0.9 9.4 12.1 7.9 6.3 0.3 3.7 2 1 2 4 4 4 0 Sec34-like family DUF1664 PF07889.12 ORF27062 - 2 8.5 16.4 4.7 7.3 2.0 3.6 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) Nre_C PF04895.12 ORF27062 - 2.1 8.3 10.6 0.47 10.4 0.9 3.5 2 1 1 3 3 3 0 Archaeal Nre, C-terminal DASH_Duo1 PF08651.10 ORF27062 - 3.9 7.3 5.9 7.4 6.4 1.3 3.3 2 1 1 3 3 3 0 DASH complex subunit Duo1 Tweety PF04906.13 ORF27062 - 7 5.2 11.9 1.2 7.8 0.8 2.7 2 1 2 4 4 4 0 Tweety DUF29 PF01724.16 ORF27062 - 9.3 6.5 13.9 0.13 12.5 1.9 2.8 2 1 1 3 3 3 0 Domain of unknown function DUF29 Baculo_F PF12259.8 ORF27062 - 9.6 4.6 7.6 0.67 8.4 1.5 1.8 1 1 1 2 2 2 0 Baculovirus F protein Na_H_antiporter PF03553.14 ORF2569 - 3.9e-38 131.4 11.5 1.5e-32 113.1 7.7 2.1 2 0 0 2 2 2 2 Na+/H+ antiporter family IMPDH PF00478.25 ORF15989 - 2.2e-58 197.9 0.1 3.2e-58 197.4 0.1 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 ORF15989 - 3e-12 46.8 1.1 1.1e-07 32.2 0.2 3.0 3 0 0 3 3 3 2 CBS domain NMO PF03060.15 ORF15989 - 4.1e-05 23.1 5.4 0.00036 20.0 1.6 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase ThiG PF05690.14 ORF15989 - 0.00013 21.4 3.0 0.00045 19.6 2.7 1.9 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG DUF561 PF04481.12 ORF15989 - 0.0052 16.0 1.6 1.8 7.7 0.2 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF561) FMN_dh PF01070.18 ORF15989 - 0.19 10.7 3.4 0.43 9.6 3.4 1.5 1 0 0 1 1 1 0 FMN-dependent dehydrogenase Chloroa_b-bind PF00504.21 ORF151102 - 5.5e-83 277.3 0.3 6.5e-32 111.3 0.0 3.1 3 0 0 3 3 3 3 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF151102 - 0.011 15.9 0.0 14 5.9 0.0 3.6 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal Pentapeptide_2 PF01469.18 ORF151102 - 2.7 7.9 11.7 2.8 7.9 3.3 2.6 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) NPR3 PF03666.13 ORF145779 - 0.037 12.8 2.1 0.063 12.1 2.1 1.3 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF4834 PF16118.5 ORF145779 - 0.26 12.3 1.9 0.98 10.4 0.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) PHO4 PF01384.20 ORF145779 - 0.4 9.7 13.6 3.6 6.5 3.7 2.3 1 1 1 2 2 2 0 Phosphate transporter family MFS_1 PF07690.16 ORF138098 - 4.7e-16 58.7 15.8 2.9e-15 56.0 0.8 2.7 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF138098 - 6.3e-09 35.2 8.0 6.3e-09 35.2 8.0 3.3 3 1 1 4 4 4 2 Sugar (and other) transporter VWA_CoxE PF05762.14 ORF13421 - 8.7e-11 41.6 0.1 2.1e-10 40.4 0.0 1.6 2 0 0 2 2 2 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 ORF13421 - 3.4e-07 30.9 0.0 1.1e-06 29.2 0.0 1.8 2 0 0 2 2 2 1 von Willebrand factor type A domain DUF2201 PF09967.9 ORF13421 - 0.025 14.7 0.0 0.049 13.8 0.0 1.5 1 0 0 1 1 1 0 VWA-like domain (DUF2201) VWA PF00092.28 ORF13421 - 0.11 12.8 0.0 0.25 11.6 0.0 1.6 2 0 0 2 2 2 0 von Willebrand factor type A domain WD40 PF00400.32 ORF12949 - 1.1e-12 48.3 3.4 0.00025 21.7 0.0 5.1 5 0 0 5 5 5 2 WD domain, G-beta repeat DUF1899 PF08953.11 ORF12949 - 3.2e-09 36.5 0.0 6.3e-09 35.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1899) DUF812 PF05667.11 ORF12949 - 0.00045 19.3 0.6 0.00066 18.7 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF812) ANAPC4_WD40 PF12894.7 ORF12949 - 0.00092 19.5 0.0 8.2 6.8 0.0 3.4 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain Spectrin PF00435.21 ORF12949 - 0.0014 19.1 1.4 0.0028 18.1 1.4 1.5 1 0 0 1 1 1 1 Spectrin repeat THOC7 PF05615.13 ORF12949 - 0.0015 18.8 0.1 0.0025 18.1 0.1 1.3 1 0 0 1 1 1 1 Tho complex subunit 7 NRBF2 PF08961.10 ORF12949 - 0.0026 17.4 2.3 0.0045 16.6 2.3 1.3 1 0 0 1 1 1 1 Nuclear receptor-binding factor 2, autophagy regulator UPF0242 PF06785.11 ORF12949 - 0.003 17.7 1.5 0.0049 17.0 1.5 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus GAS PF13851.6 ORF12949 - 0.0032 16.8 1.0 0.0051 16.2 1.0 1.2 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding Filament PF00038.21 ORF12949 - 0.004 16.8 1.0 0.0059 16.2 1.0 1.1 1 0 0 1 1 1 1 Intermediate filament protein bZIP_2 PF07716.15 ORF12949 - 0.0045 17.0 1.6 0.0054 16.8 0.4 1.8 1 1 1 2 2 2 1 Basic region leucine zipper HOOK PF05622.12 ORF12949 - 0.0045 15.2 1.7 0.0061 14.8 1.7 1.1 1 0 0 1 1 1 1 HOOK protein DUF5082 PF16888.5 ORF12949 - 0.009 16.3 0.6 0.021 15.1 0.6 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) DUF3450 PF11932.8 ORF12949 - 0.009 15.3 1.8 0.017 14.4 1.8 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Occludin_ELL PF07303.13 ORF12949 - 0.011 16.5 1.1 0.023 15.4 1.1 1.5 1 0 0 1 1 1 0 Occludin homology domain DUF693 PF05113.13 ORF12949 - 0.015 14.6 0.0 0.026 13.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF693) OmpH PF03938.14 ORF12949 - 0.015 15.6 1.4 0.031 14.6 1.4 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Mod_r PF07200.13 ORF12949 - 0.023 14.8 4.8 0.042 13.9 4.8 1.3 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Cast PF10174.9 ORF12949 - 0.025 12.9 3.6 0.034 12.4 3.6 1.1 1 0 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone YabA PF06156.13 ORF12949 - 0.025 15.2 2.9 0.049 14.3 2.9 1.4 1 0 0 1 1 1 0 Initiation control protein YabA Uso1_p115_C PF04871.13 ORF12949 - 0.027 14.8 8.3 0.053 13.9 8.3 1.4 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region FlaC_arch PF05377.11 ORF12949 - 0.029 14.7 1.8 0.081 13.3 1.8 1.8 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) bZIP_1 PF00170.21 ORF12949 - 0.032 14.3 2.0 0.032 14.3 2.0 1.9 1 1 1 2 2 2 0 bZIP transcription factor IpaB_EvcA PF03278.13 ORF12949 - 0.033 13.9 0.1 0.078 12.7 0.1 1.6 1 0 0 1 1 1 0 IpaB/EvcA family ADIP PF11559.8 ORF12949 - 0.037 14.1 5.9 0.073 13.2 5.9 1.4 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding ATG16 PF08614.11 ORF12949 - 0.044 14.0 4.9 0.068 13.4 4.9 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF1640 PF07798.11 ORF12949 - 0.047 13.7 0.8 0.088 12.9 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) Atg14 PF10186.9 ORF12949 - 0.052 12.6 1.3 0.084 12.0 1.3 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF641 PF04859.12 ORF12949 - 0.053 13.8 1.1 0.097 13.0 1.1 1.3 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) IFP_35_N PF07334.13 ORF12949 - 0.058 13.5 0.9 0.058 13.5 0.9 2.1 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DivIC PF04977.15 ORF12949 - 0.06 13.1 2.1 0.13 12.0 0.9 2.1 1 1 1 2 2 2 0 Septum formation initiator GIT_CC PF16559.5 ORF12949 - 0.06 13.2 2.8 0.076 12.9 1.3 1.8 1 1 1 2 2 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor Fungal_TACC PF12709.7 ORF12949 - 0.064 13.7 7.0 0.15 12.5 1.3 2.5 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins APG6_N PF17675.1 ORF12949 - 0.067 13.7 5.9 0.12 12.9 5.9 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Cluap1 PF10234.9 ORF12949 - 0.073 12.5 1.5 0.12 11.8 1.5 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 HMMR_N PF15905.5 ORF12949 - 0.075 12.5 4.5 0.11 11.9 4.5 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Spc7 PF08317.11 ORF12949 - 0.083 11.8 4.3 0.13 11.1 4.3 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein PspA_IM30 PF04012.12 ORF12949 - 0.085 12.4 2.3 0.13 11.8 2.3 1.2 1 0 0 1 1 1 0 PspA/IM30 family DUF4407 PF14362.6 ORF12949 - 0.1 11.9 1.4 0.15 11.4 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HIP1_clath_bdg PF16515.5 ORF12949 - 0.1 13.2 5.4 0.22 12.2 5.4 1.5 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Cnn_1N PF07989.11 ORF12949 - 0.11 12.6 6.5 0.13 12.5 3.5 2.2 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 AAA_13 PF13166.6 ORF12949 - 0.12 11.0 1.6 0.17 10.5 1.6 1.1 1 0 0 1 1 1 0 AAA domain Ge1_WD40 PF16529.5 ORF12949 - 0.12 11.3 0.0 5.4 5.9 0.0 2.2 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein V_ATPase_I PF01496.19 ORF12949 - 0.15 9.9 0.2 0.21 9.5 0.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Phage_GP20 PF06810.11 ORF12949 - 0.16 11.7 6.3 0.31 10.8 6.3 1.4 1 0 0 1 1 1 0 Phage minor structural protein GP20 BST2 PF16716.5 ORF12949 - 0.18 12.4 3.7 0.53 10.9 3.7 1.8 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 DUF1664 PF07889.12 ORF12949 - 0.19 11.7 0.5 0.36 10.9 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DHR10 PF18595.1 ORF12949 - 0.21 11.7 4.3 0.37 10.9 4.3 1.3 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain TSC22 PF01166.18 ORF12949 - 0.22 11.8 2.0 0.55 10.6 2.0 1.7 1 0 0 1 1 1 0 TSC-22/dip/bun family Cep57_CLD_2 PF14197.6 ORF12949 - 0.23 11.6 3.9 2.7 8.1 3.9 2.3 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 Golgin_A5 PF09787.9 ORF12949 - 0.28 10.6 3.7 0.43 10.0 3.7 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 ZapB PF06005.12 ORF12949 - 0.37 11.3 8.1 0.3 11.5 5.2 2.1 1 1 1 2 2 2 0 Cell division protein ZapB KLRAQ PF10205.9 ORF12949 - 0.4 10.9 3.9 0.74 10.1 3.9 1.3 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein Sec34 PF04136.15 ORF12949 - 0.4 10.5 3.4 0.7 9.8 3.4 1.3 1 0 0 1 1 1 0 Sec34-like family DUF1465 PF07323.12 ORF12949 - 0.44 10.4 2.5 0.75 9.6 2.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Tup_N PF08581.10 ORF12949 - 0.56 10.5 4.4 1.1 9.6 4.4 1.4 1 0 0 1 1 1 0 Tup N-terminal Prefoldin PF02996.17 ORF12949 - 0.75 9.7 4.8 0.32 10.9 1.6 1.9 1 1 1 2 2 2 0 Prefoldin subunit DUF4094 PF13334.6 ORF12949 - 0.9 10.0 4.5 3.4 8.1 4.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) Spc24 PF08286.11 ORF12949 - 1 9.6 8.3 1.7 8.9 5.4 2.4 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Gly-rich_Ago1 PF12764.7 ORF12949 - 1.1 10.1 3.6 1.9 9.3 3.6 1.4 1 0 0 1 1 1 0 Glycine-rich region of argonaut DUF16 PF01519.16 ORF12949 - 1.4 9.5 4.8 2.6 8.6 4.8 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF16 TMPIT PF07851.13 ORF12949 - 2.2 7.5 3.4 3.2 6.9 3.4 1.1 1 0 0 1 1 1 0 TMPIT-like protein AKNA PF12443.8 ORF12949 - 3.2 8.5 6.9 2.2 9.0 0.8 2.3 1 1 1 2 2 2 0 AT-hook-containing transcription factor Pkinase PF00069.25 ORF128349 - 4.4e-54 183.6 0.0 6.7e-54 183.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF128349 - 3.2e-20 72.5 0.0 6.3e-13 48.6 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase APH PF01636.23 ORF128349 - 0.00011 22.2 1.2 0.00044 20.2 0.5 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF128349 - 0.0022 17.0 0.1 0.003 16.6 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_C PF00433.24 ORF128349 - 0.015 16.0 0.3 0.04 14.6 0.3 2.0 1 1 0 1 1 1 0 Protein kinase C terminal domain RIO1 PF01163.22 ORF128349 - 0.062 12.9 0.6 0.11 12.1 0.6 1.3 1 0 0 1 1 1 0 RIO1 family Kinase-like PF14531.6 ORF128349 - 0.16 11.3 0.0 0.47 9.7 0.0 1.7 1 1 0 1 1 1 0 Kinase-like Aft1_OSA PF11785.8 ORF128349 - 3.3 8.2 7.0 18 5.9 0.8 3.3 3 0 0 3 3 3 0 Aft1 osmotic stress response (OSM) domain bZIP_Maf PF03131.17 ORF128118 - 0.084 13.4 5.4 0.2 12.2 5.4 1.6 1 0 0 1 1 1 0 bZIP Maf transcription factor ZZ PF00569.17 ORF124794 - 4.5e-21 74.4 25.2 2.2e-10 40.2 8.0 2.3 2 0 0 2 2 2 2 Zinc finger, ZZ type N_BRCA1_IG PF16158.5 ORF124794 - 2.2e-05 25.1 0.0 6.2e-05 23.7 0.0 1.8 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene HrpJ PF07201.11 ORF124794 - 0.0085 16.4 1.4 1 9.7 0.1 2.4 2 0 0 2 2 2 2 HrpJ-like domain HEAT_EZ PF13513.6 ORF124794 - 0.019 15.5 0.2 0.048 14.2 0.2 1.7 1 0 0 1 1 1 0 HEAT-like repeat HEAT_2 PF13646.6 ORF124794 - 0.026 14.9 1.1 0.06 13.7 0.2 2.0 2 0 0 2 2 2 0 HEAT repeats HEAT PF02985.22 ORF124794 - 0.14 12.5 0.1 0.56 10.6 0.1 2.1 1 0 0 1 1 1 0 HEAT repeat DNA_pol_E_B PF04042.16 ORF122300 - 1.3e-37 129.2 0.0 1.9e-37 128.7 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Ion_trans PF00520.31 ORF122177 - 1.7e-11 43.8 8.9 2.9e-11 43.1 8.9 1.3 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 ORF122177 - 0.34 10.7 3.3 0.74 9.6 3.3 1.7 1 1 0 1 1 1 0 Ligand-gated ion channel MFS_1 PF07690.16 ORF112979 - 2.7e-40 138.4 44.7 2.3e-32 112.3 18.8 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily SieB PF14163.6 ORF112979 - 0.0021 17.6 0.4 0.009 15.5 0.0 2.2 2 0 0 2 2 2 1 Super-infection exclusion protein B Squash PF00299.18 ORF112979 - 0.12 12.5 0.2 0.34 11.0 0.2 1.8 1 0 0 1 1 1 0 Squash family serine protease inhibitor MotB_plug PF13677.6 ORF112979 - 0.95 9.1 6.1 16 5.2 0.1 2.6 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB PDH_E1_M PF17831.1 ORF107443 - 4.5e-93 311.0 0.8 6.9e-93 310.4 0.8 1.2 1 0 0 1 1 1 1 Pyruvate dehydrogenase E1 component middle domain Transketolase_C PF02780.20 ORF107443 - 0.0029 17.5 0.3 0.015 15.1 0.0 2.3 2 0 0 2 2 2 1 Transketolase, C-terminal domain PALP PF00291.25 ORF99251 - 1.7e-65 221.4 0.0 2.2e-65 221.0 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CBS PF00571.28 ORF99251 - 5.9e-08 33.0 0.6 8.7e-06 26.1 0.1 3.1 2 0 0 2 2 2 2 CBS domain LptE PF04390.12 ORF99126 - 0.0036 18.0 1.9 0.98 10.1 0.2 2.6 2 0 0 2 2 2 2 Lipopolysaccharide-assembly Hepar_II_III PF07940.13 ORF99126 - 0.012 15.2 0.1 3.7 7.1 0.0 2.2 2 0 0 2 2 2 0 Heparinase II/III-like protein Tmemb_9 PF05434.11 ORF99126 - 0.024 14.5 0.4 0.06 13.2 0.4 1.7 1 0 0 1 1 1 0 TMEM9 Sigma_reg_N PF13800.6 ORF99126 - 0.22 11.8 2.4 0.85 9.9 0.7 2.6 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Orf78 PF06024.12 ORF99126 - 0.46 10.8 3.0 0.26 11.6 0.2 2.1 2 0 0 2 2 2 0 Orf78 (ac78) Ac76 PF05814.11 ORF99126 - 0.53 10.3 7.3 0.54 10.3 0.9 2.8 3 0 0 3 3 3 0 Orf76 (Ac76) DUF4051 PF13260.6 ORF99126 - 1.6 8.5 7.2 0.086 12.6 1.1 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF4051) DUF4581 PF15167.6 ORF99126 - 2.5 8.3 4.9 59 3.8 0.1 3.8 4 1 0 4 4 4 0 Domain of unknown function (DUF4581) DUF3139 PF11337.8 ORF99126 - 3.8 8.2 8.1 7.6 7.3 6.6 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3139) NAD-GH PF10712.9 ORF91025 - 1.4e-198 661.0 22.3 1.6e-198 660.8 22.3 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase DUF4157 PF13699.6 ORF89667 - 0.044 14.0 0.1 21 5.5 0.0 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4157) PAN_4 PF14295.6 ORF89667 - 0.36 10.8 8.7 0.44 10.5 0.8 2.6 1 1 1 2 2 2 0 PAN domain DUF3439 PF11921.8 ORF89667 - 9.3 6.2 22.8 0.43 10.5 8.5 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF3439) Ank_2 PF12796.7 ORF74968 - 7.6e-39 132.2 4.3 2.4e-08 34.4 0.0 5.4 1 1 5 6 6 6 6 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF74968 - 2e-32 110.8 16.0 2.1e-05 24.7 0.4 7.6 4 2 3 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF74968 - 3.5e-26 88.4 10.0 0.00077 19.7 0.0 9.9 9 1 0 9 9 9 6 Ankyrin repeat Ank_4 PF13637.6 ORF74968 - 3.2e-24 85.0 5.6 2.7e-06 27.8 0.2 7.0 4 1 4 8 8 8 6 Ankyrin repeats (many copies) Ank PF00023.30 ORF74968 - 1.2e-22 79.3 10.1 0.0026 18.1 0.0 9.4 8 1 1 9 9 9 6 Ankyrin repeat HTH_23 PF13384.6 ORF74968 - 0.15 11.9 0.0 2.6 8.0 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain DUF3677 PF12432.8 ORF71342 - 0.096 13.0 0.1 0.37 11.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3677) Dec-1 PF04624.14 ORF71342 - 0.11 12.3 0.4 0.3 11.0 0.4 1.7 1 0 0 1 1 1 0 Dec-1 repeat DEFB136 PF17333.2 ORF59580 - 4.9 7.2 6.9 28 4.8 1.1 2.7 2 0 0 2 2 2 0 Beta defensin 136 Pyr_redox_2 PF07992.14 ORF50143 - 5.9e-58 196.4 0.2 7.7e-58 196.0 0.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF50143 - 9.5e-28 96.7 0.3 2.2e-27 95.5 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF50143 - 5.1e-16 59.0 2.1 1.4e-13 51.2 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF50143 - 8.7e-13 48.2 4.5 5e-11 42.4 0.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF50143 - 0.00024 20.3 2.3 0.0043 16.2 1.4 2.3 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 ORF50143 - 0.00026 19.8 0.1 0.032 13.0 0.2 2.5 3 0 0 3 3 3 1 HI0933-like protein NAD_binding_7 PF13241.6 ORF50143 - 0.0014 19.0 0.5 0.07 13.6 0.0 2.6 3 0 0 3 3 2 1 Putative NAD(P)-binding DAO PF01266.24 ORF50143 - 0.0043 16.7 0.2 0.14 11.8 0.1 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 ORF50143 - 0.0059 15.9 0.0 0.058 12.7 0.0 2.2 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain GIDA PF01134.22 ORF50143 - 0.013 14.6 0.9 0.025 13.6 0.9 1.5 1 0 0 1 1 1 0 Glucose inhibited division protein A FAD_oxidored PF12831.7 ORF50143 - 0.027 13.8 0.0 0.043 13.2 0.0 1.5 1 0 0 1 1 1 0 FAD dependent oxidoreductase K_oxygenase PF13434.6 ORF50143 - 0.044 12.9 0.0 0.14 11.3 0.0 1.7 1 1 1 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Thi4 PF01946.17 ORF50143 - 0.13 11.5 0.1 0.3 10.3 0.1 1.5 1 0 0 1 1 1 0 Thi4 family NAD_binding_8 PF13450.6 ORF50143 - 0.45 10.8 3.3 0.5 10.6 0.5 2.3 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Sugar_tr PF00083.24 ORF47759 - 2.4e-100 336.5 19.4 2.8e-100 336.3 19.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF47759 - 2e-29 102.7 16.5 2e-29 102.7 16.5 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily TRI12 PF06609.13 ORF47759 - 0.19 10.1 11.4 0.009 14.5 3.5 2.1 2 0 0 2 2 2 0 Fungal trichothecene efflux pump (TRI12) Phage_holin_3_2 PF04550.12 ORF47759 - 0.2 12.2 10.6 0.22 12.1 3.8 3.6 3 2 0 3 3 3 0 Phage holin family 2 DUF3165 PF11364.8 ORF47759 - 1.5 9.2 5.6 0.7 10.3 0.8 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3165) DUF997 PF06196.12 ORF47759 - 3.7 7.6 6.2 2.8 8.0 1.2 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF997) TPR_12 PF13424.6 ORF19981 - 6.1e-42 141.8 36.3 6.5e-11 42.4 1.0 7.9 3 1 4 8 8 8 7 Tetratricopeptide repeat TPR_10 PF13374.6 ORF19981 - 3.4e-29 99.9 34.2 0.00026 20.7 0.2 9.9 10 0 0 10 10 10 9 Tetratricopeptide repeat TPR_8 PF13181.6 ORF19981 - 2.6e-10 39.7 22.3 0.054 13.7 0.0 8.0 9 0 0 9 9 9 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF19981 - 5.2e-07 29.3 25.5 0.62 10.3 0.0 8.6 9 0 0 9 9 9 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF19981 - 0.00011 22.7 27.9 1.1 10.3 0.2 7.8 7 1 1 8 8 7 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF19981 - 0.00019 21.1 5.3 10 6.2 0.0 6.7 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF19981 - 0.001 19.0 20.6 2.5 8.3 0.1 8.5 10 0 0 10 10 10 2 Tetratricopeptide repeat DUF3856 PF12968.7 ORF19981 - 0.0029 17.7 14.7 1.7 8.7 0.4 5.3 2 1 4 6 6 6 2 Domain of Unknown Function (DUF3856) MLD PF11647.8 ORF19981 - 0.043 14.1 0.4 3 8.2 0.0 3.0 3 0 0 3 3 3 0 Membrane Localization Domain TPR_4 PF07721.14 ORF19981 - 0.12 13.1 32.9 2.9 8.8 0.5 9.0 9 0 0 9 9 9 0 Tetratricopeptide repeat DUF5113 PF17140.4 ORF19981 - 0.47 10.2 1.4 1.8 8.3 0.2 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF5113) Pkinase PF00069.25 ORF16399 - 1.1e-56 192.1 0.3 2.1e-55 187.9 0.0 2.4 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF16399 - 3.4e-32 111.7 0.0 9.7e-23 80.8 0.0 2.5 3 0 0 3 3 3 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF16399 - 2.4e-05 23.8 0.0 0.0042 16.4 0.0 2.3 2 0 0 2 2 2 2 Kinase-like FTA2 PF13095.6 ORF16399 - 0.00049 19.8 0.9 0.031 13.9 0.0 2.8 2 1 0 3 3 3 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF16399 - 0.0014 17.6 0.5 0.0053 15.7 0.0 2.0 2 0 0 2 2 2 1 Haspin like kinase domain APH PF01636.23 ORF16399 - 0.0089 16.0 0.0 0.016 15.1 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family DUF2072 PF09845.9 ORF16399 - 1.6 9.0 7.0 0.18 12.1 0.4 2.5 2 1 0 2 2 2 0 Zn-ribbon containing protein GRAM PF02893.20 ORF126193 - 2.8e-05 23.9 0.1 8.2e-05 22.5 0.1 1.9 1 0 0 1 1 1 1 GRAM domain BSD PF03909.17 ORF126193 - 3e-05 24.0 2.0 0.13 12.3 0.1 2.8 2 0 0 2 2 2 2 BSD domain PH_TFIIH PF08567.11 ORF126193 - 0.012 15.9 0.0 0.082 13.2 0.0 2.5 1 1 1 2 2 2 0 TFIIH p62 subunit, N-terminal domain Vps36_ESCRT-II PF11605.8 ORF126193 - 0.042 14.0 0.0 0.23 11.7 0.0 2.4 1 0 0 1 1 1 0 Vacuolar protein sorting protein 36 Vps36 SecIII_SopE_N PF05364.14 ORF126193 - 0.15 12.1 0.1 0.38 10.9 0.1 1.6 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Aa_trans PF01490.18 ORF121420 - 5.4e-53 180.2 15.1 6.9e-53 179.8 15.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein COX14 PF14880.6 ORF121420 - 0.69 9.8 9.3 0.35 10.7 0.1 3.3 3 0 0 3 3 3 0 Cytochrome oxidase c assembly BING4CT PF08149.11 ORF97953 - 3.6e-36 122.8 0.0 3.7e-34 116.4 0.0 2.7 3 0 0 3 3 3 1 BING4CT (NUC141) domain ANAPC4_WD40 PF12894.7 ORF97953 - 0.00031 21.0 0.0 8 6.8 0.0 4.0 3 2 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Mcl1_mid PF12341.8 ORF97953 - 0.014 14.8 0.1 0.14 11.5 0.1 2.1 1 1 0 1 1 1 0 Minichromosome loss protein, Mcl1, middle region WD40 PF00400.32 ORF97953 - 0.018 15.9 0.4 71 4.5 0.1 4.6 6 0 0 6 6 6 0 WD domain, G-beta repeat DMRT-like PF15791.5 ORF97953 - 0.048 14.1 0.7 0.11 12.9 0.7 1.5 1 0 0 1 1 1 0 Doublesex-and mab-3-related transcription factor C1 and C2 Mannitol_dh_C PF08125.13 ORF95293 - 4.1e-101 337.6 0.0 5.7e-101 337.1 0.0 1.2 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Mannitol_dh PF01232.23 ORF95293 - 5.5e-54 182.4 0.0 8.6e-54 181.8 0.0 1.3 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain XhlA PF10779.9 ORF85801 - 0.051 13.8 10.6 0.2 11.9 0.6 4.6 4 1 1 5 5 5 0 Haemolysin XhlA TMP_2 PF06791.13 ORF85801 - 0.17 11.5 0.1 0.34 10.5 0.1 1.5 1 0 0 1 1 1 0 Prophage tail length tape measure protein DUF948 PF06103.11 ORF85801 - 1.2 9.5 19.0 1.5 9.1 0.1 4.8 3 3 2 5 5 5 0 Bacterial protein of unknown function (DUF948) Baculo_PEP_C PF04513.12 ORF85801 - 1.5 8.9 10.4 16 5.5 0.5 4.1 4 0 0 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus HSBP1 PF06825.12 ORF85801 - 7.6 6.5 11.7 0.91 9.4 0.0 4.8 5 1 0 5 5 5 0 Heat shock factor binding protein 1 CCDC53 PF10152.9 ORF85801 - 9.3 6.7 10.3 0.81 10.1 0.3 2.7 3 0 0 3 3 3 0 Subunit CCDC53 of WASH complex ILVD_EDD PF00920.21 ORF6530 - 5.8e-202 671.9 0.5 6.5e-202 671.7 0.5 1.0 1 0 0 1 1 1 1 Dehydratase family ICL PF00463.21 ORF48981 - 7e-174 579.2 0.3 4.3e-104 348.9 0.1 2.0 1 1 1 2 2 2 2 Isocitrate lyase family PEP_mutase PF13714.6 ORF48981 - 6.1e-15 55.3 0.0 1e-14 54.6 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase GA-like PF17573.2 ORF48981 - 0.077 12.9 0.1 0.35 10.8 0.0 2.1 2 0 0 2 2 2 0 GA-like domain Sec15 PF04091.12 ORF45757 - 2.2e-32 112.7 18.0 2.2e-32 112.7 18.0 1.9 1 1 1 2 2 2 1 Exocyst complex subunit Sec15-like RIX1 PF08167.12 ORF45757 - 0.012 15.4 0.7 0.03 14.0 0.1 2.1 2 0 0 2 2 2 0 rRNA processing/ribosome biogenesis Glyoxalase_5 PF14696.6 ORF45757 - 0.021 15.0 0.0 0.069 13.3 0.0 1.8 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal SBDS_C PF09377.10 ORF45757 - 0.056 13.5 2.6 0.17 11.9 2.6 2.2 1 1 0 1 1 1 0 SBDS protein C-terminal domain DNA_pol_A_exo1 PF01612.20 ORF38547 - 5.6e-16 58.7 0.0 8.9e-16 58.1 0.0 1.2 1 0 0 1 1 1 1 3'-5' exonuclease Transket_pyr PF02779.24 ORF28574 - 2.3e-37 128.4 0.0 4e-37 127.6 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF28574 - 2.1e-23 82.5 0.0 3.6e-23 81.8 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain FGGY_N PF00370.21 ORF25138 - 3.3e-96 321.6 0.3 4.7e-96 321.1 0.3 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 ORF25138 - 1.9e-62 210.5 0.3 6e-62 208.9 0.8 1.6 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain Voltage_CLC PF00654.20 ORF24190 - 9.5e-33 113.9 14.8 1.2e-32 113.5 14.8 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel CBS PF00571.28 ORF24190 - 5.3e-07 30.0 0.1 0.014 15.8 0.0 2.6 2 0 0 2 2 2 2 CBS domain Sec15 PF04091.12 ORF23785 - 2.2e-32 112.7 18.0 2.2e-32 112.7 18.0 1.9 1 1 1 2 2 2 1 Exocyst complex subunit Sec15-like RIX1 PF08167.12 ORF23785 - 0.012 15.4 0.7 0.03 14.0 0.1 2.1 2 0 0 2 2 2 0 rRNA processing/ribosome biogenesis Glyoxalase_5 PF14696.6 ORF23785 - 0.021 15.0 0.0 0.069 13.3 0.0 1.8 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal SBDS_C PF09377.10 ORF23785 - 0.056 13.5 2.6 0.17 11.9 2.6 2.2 1 1 0 1 1 1 0 SBDS protein C-terminal domain Sec15 PF04091.12 ORF15847 - 2.2e-32 112.7 18.0 2.2e-32 112.7 18.0 1.9 1 1 1 2 2 2 1 Exocyst complex subunit Sec15-like RIX1 PF08167.12 ORF15847 - 0.012 15.4 0.7 0.03 14.0 0.1 2.1 2 0 0 2 2 2 0 rRNA processing/ribosome biogenesis Glyoxalase_5 PF14696.6 ORF15847 - 0.021 15.0 0.0 0.069 13.3 0.0 1.8 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal SBDS_C PF09377.10 ORF15847 - 0.056 13.5 2.6 0.17 11.9 2.6 2.2 1 1 0 1 1 1 0 SBDS protein C-terminal domain Colipase-like PF15083.6 ORF152555 - 5.5 7.2 22.2 2.6 8.2 10.8 2.5 1 1 1 2 2 2 0 Colipase-like Pkinase PF00069.25 ORF141920 - 4.1e-74 249.3 0.2 5.7e-74 248.8 0.2 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF141920 - 5.2e-34 117.7 0.1 8.3e-34 117.0 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF141920 - 1e-21 74.8 11.9 4.6e-07 28.9 1.5 4.9 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF141920 - 1.9e-19 69.9 6.6 2.4e-11 43.9 0.7 3.6 3 2 1 4 4 4 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF141920 - 4.3e-15 54.3 5.6 0.00093 18.9 0.0 4.8 3 1 1 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 ORF141920 - 1.2e-14 53.0 12.0 0.00015 21.1 0.7 4.7 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF141920 - 9.2e-11 41.4 16.6 0.00076 19.3 0.9 4.6 4 1 1 5 5 5 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF141920 - 1.8e-06 28.3 0.7 0.002 18.4 0.1 2.9 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region APH PF01636.23 ORF141920 - 9.1e-05 22.5 0.0 0.00036 20.5 0.0 1.7 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF141920 - 0.00083 18.2 0.0 0.0013 17.5 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF141920 - 0.0013 18.1 0.0 0.0062 15.9 0.0 2.1 2 1 0 2 2 2 1 Kinase-like EF-hand_4 PF12763.7 ORF141920 - 0.0016 18.3 6.1 0.24 11.4 1.0 3.6 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand Kdo PF06293.14 ORF141920 - 0.0092 15.3 0.0 0.019 14.3 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF141920 - 0.026 14.1 0.1 0.085 12.4 0.1 1.9 1 0 0 1 1 1 0 Choline/ethanolamine kinase EcKinase PF02958.20 ORF141920 - 0.028 13.7 0.0 0.068 12.5 0.0 1.6 1 0 0 1 1 1 0 Ecdysteroid kinase DUF3231 PF11553.8 ORF141920 - 0.064 12.9 0.3 0.16 11.6 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3231) Dockerin_1 PF00404.18 ORF141920 - 0.14 12.4 1.9 1.6 8.9 0.6 3.1 2 1 1 3 3 3 0 Dockerin type I domain MFS_1 PF07690.16 ORF140542 - 1.2e-27 96.8 23.3 1.2e-27 96.8 23.3 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF140542 - 1.1e-13 50.9 27.3 1.7e-07 30.5 16.1 2.4 2 1 1 3 3 3 2 Sugar (and other) transporter MFS_1_like PF12832.7 ORF140542 - 0.00031 19.7 9.1 0.00031 19.7 9.1 3.1 1 1 2 3 3 3 1 MFS_1 like family OSTbeta PF15048.6 ORF140542 - 0.21 11.7 0.6 2.2 8.4 0.2 2.5 2 0 0 2 2 2 0 Organic solute transporter subunit beta protein LapA_dom PF06305.11 ORF140542 - 2.4 8.0 9.5 3.1 7.7 0.3 3.5 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain Sugar_tr PF00083.24 ORF13342 - 4.1e-51 174.3 36.1 3.3e-49 168.0 36.1 2.0 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF13342 - 4.8e-23 81.6 13.7 4.8e-23 81.6 13.7 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily Amino_oxidase PF01593.24 ORF130105 - 5.3e-67 227.0 0.9 1.1e-44 153.5 0.1 2.1 1 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 ORF130105 - 2.4e-16 59.7 0.1 2.4e-16 59.7 0.1 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 ORF130105 - 4e-08 33.2 2.2 2.4e-07 30.7 2.2 2.1 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF130105 - 4.7e-07 29.3 0.1 4.8e-06 26.0 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF130105 - 2e-06 27.2 0.8 4.2e-06 26.1 0.8 1.5 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 ORF130105 - 0.00011 22.7 0.2 0.007 16.9 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF130105 - 0.00013 20.8 0.0 0.00021 20.2 0.0 1.3 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.17 ORF130105 - 0.00013 21.3 0.2 0.00024 20.4 0.2 1.3 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 ORF130105 - 0.00069 19.1 0.1 0.0016 17.8 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF130105 - 0.0008 18.6 0.2 0.0013 17.9 0.2 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein NAD_binding_9 PF13454.6 ORF130105 - 0.013 15.5 0.1 0.041 13.9 0.1 1.8 1 0 0 1 1 1 0 FAD-NAD(P)-binding Pyr_redox_3 PF13738.6 ORF130105 - 0.087 12.1 0.0 0.2 10.9 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF130105 - 0.14 11.2 0.2 0.24 10.4 0.2 1.4 1 0 0 1 1 1 0 Glucose inhibited division protein A Thioredoxin PF00085.20 ORF128331 - 8e-38 128.6 1.3 2.4e-19 69.2 0.0 2.9 3 0 0 3 3 3 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF128331 - 1.5e-18 67.4 12.2 8.6e-13 48.6 0.3 4.7 1 1 4 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF128331 - 7.3e-12 45.7 5.0 0.00014 22.3 0.2 4.8 2 2 2 4 4 4 2 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF128331 - 8.3e-09 35.5 0.3 0.0025 18.0 0.0 3.7 3 0 0 3 3 3 2 Thioredoxin-like Thioredoxin_8 PF13905.6 ORF128331 - 1.4e-06 28.5 3.0 0.14 12.5 0.0 4.7 4 1 0 4 4 4 2 Thioredoxin-like Calsequestrin PF01216.17 ORF128331 - 0.00017 20.8 1.6 0.00032 19.8 1.6 1.4 1 0 0 1 1 1 1 Calsequestrin OST3_OST6 PF04756.13 ORF128331 - 0.00018 21.0 0.8 0.41 9.9 0.1 2.8 2 1 1 3 3 3 2 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF128331 - 0.00054 20.0 0.4 0.53 10.4 0.2 2.7 2 0 0 2 2 2 2 Thioredoxin domain AhpC-TSA PF00578.21 ORF128331 - 0.0024 17.8 0.4 0.32 10.9 0.0 3.4 3 1 0 3 3 3 1 AhpC/TSA family PepSY_2 PF13670.6 ORF128331 - 0.13 12.3 0.1 0.3 11.1 0.1 1.5 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain Titin_Ig-rpts PF06582.12 ORF108357 - 0.13 12.2 1.5 0.69 9.9 0.1 2.4 2 0 0 2 2 2 0 Titin repeat Pkinase PF00069.25 ORF106077 - 8.3e-42 143.4 0.0 1.1e-41 142.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF106077 - 2.2e-21 76.3 0.0 3.3e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF106077 - 0.00096 19.1 0.8 0.025 14.5 0.2 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF106077 - 0.086 12.1 0.1 0.86 8.9 0.0 2.1 2 0 0 2 2 2 0 Kinase-like IQ PF00612.27 ORF95626 - 2.4 8.2 6.8 0.29 11.0 0.5 2.8 3 0 0 3 3 3 0 IQ calmodulin-binding motif Csm1_N PF18504.1 ORF9501 - 7.5e-05 23.0 4.0 7.5e-05 23.0 4.0 5.4 4 3 2 6 6 6 2 Csm1 N-terminal domain DivIC PF04977.15 ORF9501 - 0.0014 18.4 20.2 0.029 14.1 2.2 5.0 3 1 2 5 5 5 3 Septum formation initiator zf-RING_10 PF16685.5 ORF9501 - 0.28 11.3 5.4 0.22 11.7 1.6 2.6 2 0 0 2 2 2 0 zinc RING finger of MSL2 HisKA PF00512.25 ORF9501 - 1.4 9.0 9.9 1.7 8.7 0.2 3.9 4 1 0 4 4 4 0 His Kinase A (phospho-acceptor) domain DUF724 PF05266.14 ORF9501 - 7.5 6.3 33.0 2.6 7.8 3.7 4.0 2 2 1 3 3 3 0 Protein of unknown function (DUF724) Amino_oxidase PF01593.24 ORF89656 - 3.5e-67 227.7 0.7 1e-44 153.6 0.1 2.0 1 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 ORF89656 - 2.4e-16 59.7 0.1 2.4e-16 59.7 0.1 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 ORF89656 - 1.5e-08 34.6 1.5 4.9e-08 32.9 1.5 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF89656 - 4.4e-07 29.4 0.1 4.7e-06 26.0 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF89656 - 2.4e-06 26.9 1.1 5.2e-06 25.8 1.1 1.5 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 ORF89656 - 0.00012 20.9 0.0 0.00021 20.2 0.0 1.3 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.17 ORF89656 - 0.00013 21.3 0.2 0.00024 20.4 0.2 1.4 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 ORF89656 - 0.00014 22.4 0.1 0.007 16.9 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 ORF89656 - 0.00082 18.5 0.2 0.0013 17.9 0.2 1.3 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_oxidored PF12831.7 ORF89656 - 0.0022 17.4 2.2 0.0048 16.3 1.1 2.0 2 1 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 ORF89656 - 0.014 15.4 0.1 0.041 13.9 0.1 1.8 1 0 0 1 1 1 0 FAD-NAD(P)-binding Pyr_redox_3 PF13738.6 ORF89656 - 0.081 12.2 0.0 0.18 11.0 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF89656 - 0.16 11.0 0.8 0.24 10.4 0.2 1.6 2 0 0 2 2 2 0 Glucose inhibited division protein A PARP PF00644.20 ORF87742 - 4.1e-05 23.3 0.0 7.3e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain ABC_tran PF00005.27 ORF63774 - 3.7e-29 102.0 0.0 7.9e-29 100.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF63774 - 1.4e-12 48.1 8.6 1.4e-08 35.0 0.0 3.8 3 2 2 5 5 5 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF63774 - 0.0012 18.4 0.0 0.11 11.9 0.0 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain SRP54 PF00448.22 ORF63774 - 0.17 11.5 0.2 0.52 9.9 0.2 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain LpxB PF02684.15 ORF5256 - 1.8e-06 27.1 0.0 0.058 12.2 0.0 2.9 3 1 0 3 3 3 2 Lipid-A-disaccharide synthetase DUF2937 PF11157.8 ORF18482 - 0.038 13.7 0.1 3.5 7.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2937) MFS_1 PF07690.16 ORF17436 - 4.3e-11 42.3 14.2 8.3e-11 41.4 14.2 1.5 1 0 0 1 1 1 1 Major Facilitator Superfamily PHO4 PF01384.20 ORF17436 - 0.01 14.9 10.6 0.056 12.5 0.5 2.3 1 1 1 2 2 2 0 Phosphate transporter family ABC_tran PF00005.27 ORF148025 - 3.7e-29 102.0 0.0 7.9e-29 100.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF148025 - 8.8e-13 48.7 7.5 1.4e-08 35.0 0.0 3.6 3 1 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF148025 - 0.0011 18.5 0.0 0.11 11.9 0.0 2.5 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain Zeta_toxin PF06414.12 ORF148025 - 0.033 13.5 0.0 4.5 6.5 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin SRP54 PF00448.22 ORF148025 - 0.17 11.5 0.2 0.52 9.9 0.2 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain ABC_tran PF00005.27 ORF129529 - 3.7e-29 102.0 0.0 7.9e-29 100.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF129529 - 8.8e-13 48.7 7.5 1.4e-08 35.0 0.0 3.6 3 1 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF129529 - 0.0011 18.5 0.0 0.11 11.9 0.0 2.5 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain Zeta_toxin PF06414.12 ORF129529 - 0.033 13.5 0.0 4.5 6.5 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin SRP54 PF00448.22 ORF129529 - 0.17 11.5 0.2 0.52 9.9 0.2 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain CCDC92 PF14916.6 ORF119585 - 0.1 12.3 0.1 0.1 12.3 0.1 1.7 2 0 0 2 2 2 0 Coiled-coil domain of unknown function ABC_tran PF00005.27 ORF117218 - 3.2e-29 102.2 0.0 7.9e-29 100.9 0.0 1.7 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF117218 - 1.3e-12 48.2 7.9 1.4e-08 35.0 0.0 3.6 3 1 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF117218 - 0.00096 18.6 0.0 0.1 12.0 0.0 2.5 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain SRP54 PF00448.22 ORF117218 - 0.17 11.5 0.2 0.52 9.9 0.2 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Ion_trans PF00520.31 ORF10705 - 4.9e-13 48.9 8.6 8.9e-13 48.0 8.6 1.4 1 0 0 1 1 1 1 Ion transport protein cNMP_binding PF00027.29 ORF10705 - 0.00099 19.1 0.0 0.0021 18.1 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Lig_chan PF00060.26 ORF10705 - 0.039 13.8 6.1 0.023 14.6 2.0 2.6 3 0 0 3 3 3 0 Ligand-gated ion channel MnhB PF04039.13 ORF10705 - 0.049 13.9 0.3 0.19 12.0 0.3 2.0 2 0 0 2 2 2 0 Domain related to MnhB subunit of Na+/H+ antiporter Baculo_PEP_C PF04513.12 ORF104772 - 0.063 13.3 7.5 13 5.8 0.1 4.5 4 1 1 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF948 PF06103.11 ORF104772 - 0.61 10.4 3.6 5.4 7.3 0.2 3.5 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) PolyA_pol PF01743.20 ORF101882 - 9.3e-30 103.7 0.9 1.8e-29 102.7 0.1 1.9 2 0 0 2 2 2 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 ORF101882 - 0.017 14.9 0.0 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 Probable RNA and SrmB- binding site of polymerase A tRNA_NucTran2_2 PF13735.6 ORF101882 - 0.15 12.1 0.8 0.78 9.7 0.8 2.2 1 1 0 1 1 1 0 tRNA nucleotidyltransferase domain 2 putative Kinesin PF00225.23 ORF97784 - 3e-50 171.0 0.0 5.6e-50 170.2 0.0 1.4 1 1 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF97784 - 2e-10 40.8 0.0 3.8e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding SAM_PNT PF02198.16 ORF97784 - 0.00013 21.8 0.0 0.00026 20.9 0.0 1.4 1 0 0 1 1 1 1 Sterile alpha motif (SAM)/Pointed domain AAA_16 PF13191.6 ORF97784 - 0.002 18.5 1.8 0.012 15.9 1.8 2.3 1 1 0 1 1 1 1 AAA ATPase domain Bac_DnaA PF00308.18 ORF97784 - 0.01 15.7 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_22 PF13401.6 ORF97784 - 0.011 16.0 0.0 0.027 14.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain SAM_3 PF18016.1 ORF97784 - 0.012 15.4 0.0 0.057 13.2 0.0 2.1 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) Zeta_toxin PF06414.12 ORF97784 - 0.021 14.1 0.1 0.048 12.9 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 ORF97784 - 0.055 13.2 0.5 0.11 12.2 0.5 1.4 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF97784 - 0.13 12.3 0.1 0.24 11.4 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain DUF815 PF05673.13 ORF97784 - 0.18 10.9 0.0 0.3 10.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) rRNA_proc-arch PF13234.6 ORF97279 - 1.9e-60 205.1 0.7 1.9e-60 205.1 0.7 1.6 2 0 0 2 2 2 1 rRNA-processing arch domain DSHCT PF08148.12 ORF97279 - 7.6e-47 159.0 1.0 7.6e-47 159.0 1.0 2.0 2 0 0 2 2 2 1 DSHCT (NUC185) domain Sugar_tr PF00083.24 ORF9184 - 8.3e-66 222.7 24.8 1e-65 222.4 24.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF9184 - 5.8e-27 94.5 12.0 5.8e-27 94.5 12.0 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily DWNN PF08783.11 ORF83492 - 0.18 12.1 1.8 0.77 10.1 1.8 2.2 1 0 0 1 1 1 0 DWNN domain Pyridoxal_deC PF00282.19 ORF81420 - 1.3e-40 139.3 0.0 2e-40 138.6 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 ORF81420 - 9.9e-05 21.8 0.0 0.00014 21.2 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 ORF81420 - 0.0075 15.3 0.0 0.026 13.5 0.0 1.8 1 1 0 1 1 1 1 Aminotransferase class-V FlaC_arch PF05377.11 ORF79702 - 0.031 14.7 2.1 0.031 14.7 2.1 6.1 5 1 1 7 7 7 0 Flagella accessory protein C (FlaC) ERM PF00769.19 ORF79702 - 9 6.0 54.3 0.023 14.5 6.5 3.3 2 1 1 3 3 3 0 Ezrin/radixin/moesin family Aldedh PF00171.22 ORF54940 - 4.6e-172 572.7 0.0 5.2e-172 572.5 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 ORF54940 - 0.15 11.5 0.0 0.29 10.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) RabGAP-TBC PF00566.18 ORF45338 - 3.6e-17 62.8 8.4 3.6e-17 62.8 8.4 1.7 2 0 0 2 2 2 1 Rab-GTPase-TBC domain Sugar_tr PF00083.24 ORF41796 - 8.3e-66 222.7 24.8 1e-65 222.4 24.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF41796 - 5.8e-27 94.5 12.0 5.8e-27 94.5 12.0 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily Fe-ADH PF00465.19 ORF38086 - 1.1e-112 376.5 7.3 1.3e-112 376.2 7.3 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 ORF38086 - 7.7e-17 61.8 5.6 8.3e-10 38.8 0.0 2.2 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase Peripla_BP_6 PF13458.6 ORF38086 - 0.0055 16.4 0.0 0.01 15.5 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein LBP_BPI_CETP_C PF02886.17 ORF34364 - 5e-06 26.1 0.6 8e-06 25.5 0.6 1.3 1 0 0 1 1 1 1 LBP / BPI / CETP family, C-terminal domain Arm PF00514.23 ORF149663 - 2.1e-36 122.8 22.7 7.1e-10 38.6 0.0 8.3 9 0 0 9 9 9 5 Armadillo/beta-catenin-like repeat HEAT PF02985.22 ORF149663 - 4.8e-19 66.8 11.5 0.00014 21.8 0.0 7.7 8 0 0 8 8 7 5 HEAT repeat HEAT_2 PF13646.6 ORF149663 - 1.8e-15 57.1 13.4 1.4e-05 25.4 0.4 5.1 3 2 2 5 5 5 5 HEAT repeats Cnd1 PF12717.7 ORF149663 - 2.8e-15 56.7 4.3 3.7e-05 23.8 0.5 3.9 2 1 2 4 4 4 3 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 ORF149663 - 4.2e-14 52.7 14.0 0.01 16.3 0.2 6.1 5 1 0 5 5 5 3 HEAT-like repeat Adaptin_N PF01602.20 ORF149663 - 5.7e-09 35.1 5.9 0.00037 19.2 2.5 3.2 2 1 1 3 3 3 2 Adaptin N terminal region DNA_alkylation PF08713.11 ORF149663 - 2.5e-07 30.6 1.2 0.36 10.5 0.0 4.3 2 1 2 4 4 4 2 DNA alkylation repair enzyme CLASP_N PF12348.8 ORF149663 - 1.1e-05 25.1 1.1 0.021 14.4 0.1 2.6 2 0 0 2 2 2 2 CLASP N terminal Proteasom_PSMB PF10508.9 ORF149663 - 1.2e-05 24.0 6.7 0.0013 17.3 1.2 3.4 1 1 1 3 3 3 1 Proteasome non-ATPase 26S subunit Vac14_Fab1_bd PF12755.7 ORF149663 - 0.00022 21.8 0.7 0.1 13.2 0.1 3.1 2 2 0 2 2 2 1 Vacuolar 14 Fab1-binding region V-ATPase_H_N PF03224.14 ORF149663 - 0.00034 20.0 1.5 0.031 13.6 0.1 3.0 2 1 1 3 3 3 1 V-ATPase subunit H V-ATPase_H_C PF11698.8 ORF149663 - 0.00065 19.8 1.9 0.73 10.0 0.1 3.8 3 1 1 4 4 4 1 V-ATPase subunit H Mo25 PF08569.11 ORF149663 - 0.001 18.5 1.2 0.14 11.5 0.2 3.0 1 1 1 3 3 3 1 Mo25-like CHASE6_C PF17150.4 ORF149663 - 0.0014 19.3 2.0 9.5 7.0 0.1 5.0 2 2 2 4 4 4 0 C-terminal domain of two-partite extracellular sensor domain Atx10homo_assoc PF09759.9 ORF149663 - 0.0072 16.3 1.0 0.89 9.6 0.6 3.2 2 1 1 3 3 3 1 Spinocerebellar ataxia type 10 protein domain Arm_2 PF04826.13 ORF149663 - 0.0074 15.8 1.6 8.6 5.7 0.1 4.0 1 1 4 5 5 5 1 Armadillo-like API5 PF05918.11 ORF149663 - 0.05 12.4 2.1 0.39 9.5 0.0 2.4 1 1 0 2 2 2 0 Apoptosis inhibitory protein 5 (API5) ApoC-I PF04691.12 ORF149663 - 0.11 12.5 1.6 14 5.7 0.0 3.9 5 0 0 5 5 4 0 Apolipoprotein C-I (ApoC-1) HEAT_UF PF18817.1 ORF149663 - 0.3 11.4 2.4 3.3 8.0 0.1 3.6 4 0 0 4 4 3 0 Repeat of uncharacterized protein PH0542 U3snoRNP10 PF12397.8 ORF149663 - 0.44 10.9 8.6 0.63 10.4 1.3 3.9 2 1 1 3 3 3 0 U3 small nucleolar RNA-associated protein 10 DWNN PF08783.11 ORF147342 - 0.18 12.1 1.8 0.77 10.1 1.8 2.2 1 0 0 1 1 1 0 DWNN domain TANGO2 PF05742.12 ORF139925 - 4e-28 99.1 0.3 4e-28 99.1 0.3 1.9 2 1 0 2 2 2 1 Transport and Golgi organisation 2 CPP1-like PF11833.8 ORF134772 - 2.2 7.9 5.2 0.59 9.8 0.4 2.4 2 0 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like MatE PF01554.18 ORF127053 - 8e-53 178.4 39.6 1.6e-30 105.9 14.5 2.4 3 0 0 3 3 3 2 MatE DNA_pol_B PF00136.21 ORF117624 - 9.9e-45 153.1 0.0 1.1e-43 149.6 0.0 2.1 1 1 0 1 1 1 1 DNA polymerase family B DNA_pol_B_2 PF03175.13 ORF117624 - 1.9e-05 23.8 0.0 0.0026 16.7 0.0 2.1 2 0 0 2 2 2 2 DNA polymerase type B, organellar and viral DUF4201 PF13870.6 ORF115136 - 0.0091 15.7 7.5 0.0091 15.7 7.5 4.3 1 1 3 4 4 4 1 Domain of unknown function (DUF4201) FlaC_arch PF05377.11 ORF115136 - 0.031 14.7 2.1 0.031 14.7 2.1 6.3 5 1 1 6 6 6 0 Flagella accessory protein C (FlaC) RPEL PF02755.15 ORF115136 - 0.21 11.4 0.2 0.21 11.4 0.2 2.8 2 0 0 2 2 2 0 RPEL repeat TPR_MLP1_2 PF07926.12 ORF115136 - 8 6.5 58.4 9.5 6.3 0.1 5.6 2 2 2 5 5 5 0 TPR/MLP1/MLP2-like protein SURNod19 PF07712.12 ORF105170 - 3e-19 69.1 4.1 9.2e-15 54.3 2.0 2.8 2 1 0 2 2 2 2 Stress up-regulated Nod 19 Peptidase_S28 PF05577.12 ORF101331 - 6.3e-84 282.3 1.8 7.5e-84 282.0 1.8 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF101331 - 8.4e-09 35.2 0.1 3.1e-08 33.4 0.0 2.0 2 1 0 2 2 2 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF101331 - 9.1e-08 31.6 0.0 1.4e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF101331 - 1.5e-05 24.8 0.0 2.3e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Tannase PF07519.11 ORF101331 - 0.00073 18.6 0.5 0.0012 17.9 0.5 1.3 1 0 0 1 1 1 1 Tannase and feruloyl esterase Peptidase_S37 PF05576.11 ORF101331 - 0.0034 16.1 1.0 0.0047 15.7 0.1 1.7 3 0 0 3 3 3 1 PS-10 peptidase S37 DUF2920 PF11144.8 ORF101331 - 0.0071 15.6 0.2 0.014 14.6 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2920) PGAP1 PF07819.13 ORF101331 - 0.023 14.4 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein DUF3141 PF11339.8 ORF101331 - 0.026 13.0 0.0 0.041 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3141) Esterase PF00756.20 ORF101331 - 0.05 13.2 0.0 0.11 12.2 0.0 1.5 1 1 0 1 1 1 0 Putative esterase Esterase_phd PF10503.9 ORF101331 - 0.087 12.3 0.0 0.17 11.4 0.0 1.4 1 1 0 1 1 1 0 Esterase PHB depolymerase Abhydrolase_6 PF12697.7 ORF101331 - 0.11 13.1 0.0 0.2 12.3 0.0 1.6 2 0 0 2 2 1 0 Alpha/beta hydrolase family Rol_Rep_N PF18106.1 ORF101331 - 0.12 12.7 0.4 9.5 6.6 0.1 2.7 2 0 0 2 2 2 0 Rolling Circle replication initiation protein N-terminal domain DUF948 PF06103.11 ORF92791 - 0.0026 18.0 32.1 0.19 12.0 0.8 6.8 3 3 3 6 6 6 4 Bacterial protein of unknown function (DUF948) Fungal_trans_2 PF11951.8 ORF92791 - 9.2 5.0 15.2 0.23 10.2 0.4 3.8 1 1 1 3 3 3 0 Fungal specific transcription factor domain DUF1664 PF07889.12 ORF92791 - 9.4 6.3 46.4 1.9 8.6 3.7 6.4 2 2 5 7 7 7 0 Protein of unknown function (DUF1664) YtxH PF12732.7 ORF92791 - 9.8 6.8 27.9 2.5 8.7 2.5 5.8 3 2 0 3 3 3 0 YtxH-like protein p450 PF00067.22 ORF64501 - 5.8e-76 256.1 0.0 6.9e-76 255.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Aldedh PF00171.22 ORF64410 - 1.5e-168 561.1 0.0 1.7e-168 560.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family YCII PF03795.14 ORF64410 - 0.057 13.8 0.0 0.16 12.4 0.0 1.7 1 1 0 1 1 1 0 YCII-related domain PP-binding PF00550.25 ORF63684 - 7.9e-20 71.0 1.1 1.6e-08 34.8 0.1 2.9 3 0 0 3 3 3 2 Phosphopantetheine attachment site Phage_holin_6_1 PF09682.10 ORF63684 - 0.061 13.7 0.4 23 5.5 0.1 2.9 2 0 0 2 2 2 0 Bacteriophage holin of superfamily 6 (Holin_LLH) TPH PF13868.6 ORF60550 - 0.018 13.5 112.6 0.0087 14.6 106.3 2.3 1 1 1 2 2 2 0 Trichohyalin-plectin-homology domain XdhC_C PF13478.6 ORF58532 - 9.3e-33 113.4 1.0 2.6e-31 108.7 0.1 2.7 3 0 0 3 3 3 1 XdhC Rossmann domain XdhC_CoxI PF02625.16 ORF58532 - 4e-09 36.5 1.5 2.1e-08 34.2 0.1 2.9 3 0 0 3 3 3 1 XdhC and CoxI family 2-Hacid_dh_C PF02826.19 ORF58532 - 6.4e-05 22.4 0.0 0.28 10.5 0.0 2.8 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 ORF58532 - 8.3e-05 22.5 0.3 0.47 10.3 0.0 2.4 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 ORF58532 - 0.0006 20.3 0.1 0.63 10.7 0.0 3.3 3 0 0 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent Biotin_lipoyl PF00364.22 ORF58532 - 0.015 15.1 0.1 0.035 13.9 0.1 1.7 1 0 0 1 1 1 0 Biotin-requiring enzyme Pyr_redox_2 PF07992.14 ORF58532 - 0.04 13.1 0.3 1.7 7.8 0.1 2.4 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Biotin_lipoyl_2 PF13533.6 ORF58532 - 0.041 13.7 0.0 0.1 12.4 0.0 1.7 1 0 0 1 1 1 0 Biotin-lipoyl like Peptidase_M23 PF01551.22 ORF58532 - 0.11 12.7 0.1 0.28 11.4 0.1 1.6 1 0 0 1 1 1 0 Peptidase family M23 Aldedh PF00171.22 ORF31790 - 2.3e-181 603.4 0.1 2.6e-181 603.2 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Ion_trans_2 PF07885.16 ORF30294 - 6.3e-12 45.3 1.3 1.9e-11 43.7 1.3 1.8 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF30294 - 1.9e-05 24.0 15.9 4.2e-05 22.9 15.9 1.6 1 1 0 1 1 1 1 Ion transport protein WWE PF02825.20 ORF151291 - 0.00028 21.4 0.1 0.00068 20.2 0.1 1.7 1 0 0 1 1 1 1 WWE domain PKcGMP_CC PF16808.5 ORF135469 - 0.0056 16.5 1.9 0.0056 16.5 1.9 5.3 6 0 0 6 6 6 1 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_TATA_bd PF12325.8 ORF135469 - 0.13 12.4 34.0 0.035 14.3 2.5 4.3 1 1 3 4 4 4 0 TATA element modulatory factor 1 TATA binding DUF641 PF04859.12 ORF135469 - 5.8 7.3 32.8 8.5 6.7 9.0 4.7 1 1 3 4 4 4 0 Plant protein of unknown function (DUF641) tRNA-synt_2b PF00587.25 ORF131731 - 6.1e-37 127.3 0.0 1e-36 126.6 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 ORF131731 - 8.2e-16 58.2 7.7 8.2e-16 58.2 7.7 2.2 2 0 0 2 2 2 1 Seryl-tRNA synthetase N-terminal domain NDUF_B12 PF08122.12 ORF125991 - 0.024 14.7 3.2 34 4.6 0.0 5.2 6 0 0 6 6 6 0 NADH-ubiquinone oxidoreductase B12 subunit family Pro_dh PF01619.18 ORF122822 - 2.9e-58 197.7 0.2 4.1e-58 197.3 0.2 1.3 1 0 0 1 1 1 1 Proline dehydrogenase CSN8_PSD8_EIF3K PF10075.9 ORF122822 - 0.063 13.3 2.1 0.26 11.2 0.9 2.3 2 1 0 2 2 2 0 CSN8/PSMD8/EIF3K family AI-2E_transport PF01594.16 ORF118002 - 5.7e-67 226.2 23.3 6.8e-67 225.9 23.3 1.1 1 0 0 1 1 1 1 AI-2E family transporter ACPS PF01648.20 ORF118002 - 8.5e-09 35.6 0.0 1.4e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily DUF21 PF01595.20 ORF87161 - 3.6e-26 92.0 0.6 5.9e-26 91.2 0.6 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain YrhC PF14143.6 ORF87161 - 0.071 13.2 4.8 0.047 13.8 2.5 1.8 2 0 0 2 2 2 0 YrhC-like protein CBS PF00571.28 ORF87161 - 0.11 12.9 0.4 22 5.6 0.1 3.0 2 1 0 2 2 2 0 CBS domain Ion_trans PF00520.31 ORF86229 - 3.4e-14 52.7 14.9 5e-14 52.1 14.9 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF86229 - 4.9e-07 29.2 0.0 0.022 14.7 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF86229 - 3.3e-05 23.1 0.2 0.23 11.1 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF86229 - 0.00072 20.0 0.0 0.0027 18.1 0.0 2.0 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF86229 - 0.0012 18.7 0.5 0.22 11.4 0.0 2.8 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF86229 - 0.0046 16.4 0.4 2.4 7.8 0.4 2.6 2 0 0 2 2 2 2 EF hand Med15 PF09606.10 ORF86229 - 0.097 11.3 0.0 0.14 10.8 0.0 1.1 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal UPF0767 PF15990.5 ORF56885 - 0.029 14.5 1.4 0.18 12.0 1.0 2.6 2 0 0 2 2 2 0 UPF0767 family HlyIII PF03006.20 ORF3800 - 2.5e-51 174.5 22.7 2.4e-50 171.3 22.7 1.9 1 1 0 1 1 1 1 Haemolysin-III related DUF962 PF06127.11 ORF3800 - 0.038 14.1 0.1 1.6 8.9 0.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF962) MFS_1 PF07690.16 ORF34229 - 3.4e-39 134.8 29.9 3.9e-36 124.7 18.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF34229 - 0.16 10.3 12.0 0.08 11.3 0.5 3.3 2 2 1 3 3 3 0 Transmembrane secretion effector TMEM43 PF07787.12 ORF34229 - 5.1 6.4 5.0 5.2 6.4 1.0 2.6 2 0 0 2 2 2 0 Transmembrane protein 43 Ank_2 PF12796.7 ORF104634 - 8.1e-24 84.0 0.1 9.4e-12 45.4 0.0 3.4 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF104634 - 9.2e-22 77.1 0.4 4.6e-11 43.0 0.0 4.4 3 1 2 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF104634 - 1.2e-20 72.9 0.7 5.7e-07 29.7 0.1 5.3 5 0 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF104634 - 5.4e-19 66.3 0.2 6.8e-06 26.1 0.0 5.3 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 ORF104634 - 3.4e-15 55.9 1.6 2.7e-07 30.7 0.0 4.9 3 1 2 5 5 5 3 Ankyrin repeats (many copies) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks20.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks20.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks20.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks20.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:04:21 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1902 PF08972.11 NODE_49488_length_377_cov_1.388889_g41598_i0reverse_frame_3 - 0.057 13.4 0.4 5.1 7.1 0.0 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF1902) CCDC154 PF15450.6 NODE_49487_length_377_cov_1.394737_g41597_i0reverse_frame_2 - 0.003 16.2 1.2 0.0032 16.1 1.2 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 154 FlgN PF05130.12 NODE_49487_length_377_cov_1.394737_g41597_i0reverse_frame_2 - 0.011 16.3 1.9 0.016 15.7 0.9 1.7 2 0 0 2 2 2 0 FlgN protein Lamprin PF06403.11 NODE_49482_length_377_cov_1.766082_g41592_i0reverse_frame_3 - 5.1 7.1 6.9 16 5.5 6.9 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_49482_length_377_cov_1.766082_g41592_i0forward_frame_3 - 0.0007 19.6 5.3 0.00093 19.2 5.3 1.3 1 0 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_49482_length_377_cov_1.766082_g41592_i0forward_frame_2 - 0.025 14.5 9.3 0.035 14.1 8.5 1.6 1 1 1 2 2 2 0 Lamprin Peptidase_M35 PF02102.15 NODE_49481_length_377_cov_1.766082_g41591_i0reverse_frame_2 - 0.23 10.3 0.6 0.29 9.9 0.6 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family Ribosomal_L32p PF01783.23 NODE_49481_length_377_cov_1.766082_g41591_i0reverse_frame_2 - 0.98 9.7 6.4 1.6 9.0 2.3 2.3 2 0 0 2 2 2 0 Ribosomal L32p protein family DUF2585 PF10755.9 NODE_49480_length_377_cov_1.766082_g41590_i0forward_frame_3 - 0.043 13.5 0.3 0.062 13.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2585) DUF5456 PF17539.2 NODE_49475_length_377_cov_1.979532_g41585_i0reverse_frame_2 - 0.084 12.7 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5456) ELMO_CED12 PF04727.13 NODE_49469_length_377_cov_2.388889_g41579_i0reverse_frame_2 - 3.7 7.6 6.7 6.8 6.8 0.5 2.3 1 1 1 2 2 2 0 ELMO/CED-12 family ABC_tran_CTD PF16326.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 2.3e-05 24.5 0.6 2.3e-05 24.5 0.6 2.8 1 1 0 2 2 2 1 ABC transporter C-terminal domain HSCB_C PF07743.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.00018 21.9 10.0 0.00056 20.3 3.9 3.0 1 1 1 2 2 2 1 HSCB C-terminal oligomerisation domain DUF4795 PF16043.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.00032 20.4 12.7 0.0014 18.3 12.6 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4795) SEN1_N PF12726.7 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.00042 18.7 0.5 0.00049 18.5 0.5 1.1 1 0 0 1 1 1 1 SEN1 N terminal DUF2397 PF09660.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.00047 19.2 3.3 0.00057 18.9 3.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2397) ApoLp-III PF07464.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0015 18.6 3.9 0.3 11.2 1.0 2.1 1 1 1 2 2 2 2 Apolipophorin-III precursor (apoLp-III) DUF1664 PF07889.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0038 17.3 5.9 0.3 11.1 1.5 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) IL11 PF07400.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0042 16.7 4.2 0.034 13.8 0.9 2.5 1 1 2 3 3 3 1 Interleukin 11 baeRF_family5 PF18846.1 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0054 16.9 1.6 0.0083 16.3 1.5 1.3 1 1 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 5 COG5 PF10392.9 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0085 16.3 2.9 0.18 11.9 0.1 2.1 1 1 1 2 2 2 1 Golgi transport complex subunit 5 Cauli_AT PF03233.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.0086 16.0 9.6 0.12 12.3 2.2 2.1 1 1 1 2 2 2 2 Aphid transmission protein HSBP1 PF06825.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.01 15.7 6.1 0.7 9.8 0.2 4.2 4 1 0 4 4 4 0 Heat shock factor binding protein 1 PCRF PF03462.18 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.017 15.0 4.4 0.025 14.5 4.4 1.3 1 0 0 1 1 1 0 PCRF domain ADIP PF11559.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.024 14.7 10.9 0.54 10.3 3.0 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding TACC_C PF05010.14 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.024 14.4 6.2 0.031 14.1 6.2 1.2 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal LXG PF04740.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.025 14.3 8.1 0.045 13.4 1.0 2.7 1 1 2 3 3 3 0 LXG domain of WXG superfamily TolA_bind_tri PF16331.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.025 14.6 3.1 0.025 14.6 3.1 2.9 1 1 1 2 2 2 0 TolA binding protein trimerisation Spectrin PF00435.21 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.026 15.0 8.3 0.088 13.3 1.5 2.2 1 1 0 2 2 2 0 Spectrin repeat DUF3086 PF11285.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.026 13.6 2.1 0.043 12.9 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) KxDL PF10241.9 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.031 14.5 8.9 0.075 13.3 1.8 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein Spc7 PF08317.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.036 13.0 9.5 0.045 12.6 9.5 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Fib_alpha PF08702.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.036 14.2 7.9 0.054 13.7 5.8 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF2630 PF10944.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.04 14.4 7.9 2.6 8.6 1.4 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF2630) Mer2 PF09074.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.043 13.6 9.3 0.055 13.3 9.3 1.1 1 0 0 1 1 1 0 Mer2 COG2 PF06148.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.044 13.9 2.4 0.054 13.6 0.4 2.0 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 AAA_32 PF13654.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.05 12.4 3.8 0.059 12.2 3.8 1.2 1 0 0 1 1 1 0 AAA domain YlqD PF11068.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.054 13.9 9.9 0.045 14.1 4.2 2.0 1 1 1 2 2 2 0 YlqD protein FlaC_arch PF05377.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.064 13.7 4.9 3.3 8.2 0.9 3.0 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF4404 PF14357.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.066 13.9 11.3 0.8 10.4 1.3 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4404) Allexi_40kDa PF05549.11 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.071 12.6 1.7 0.1 12.1 1.7 1.3 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF4164 PF13747.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.08 13.2 9.2 0.31 11.4 4.5 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) EzrA PF06160.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.086 11.0 10.3 0.32 9.1 10.3 1.8 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA Baculo_PEP_C PF04513.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.088 12.8 9.2 4.9 7.2 9.2 2.6 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus ACP_PD PF04336.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.092 13.2 1.1 1.8 9.0 0.1 2.2 1 1 1 2 2 2 0 Acyl carrier protein phosphodiesterase LPP PF04728.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.094 13.1 1.0 0.094 13.1 1.0 3.1 2 1 1 3 3 3 0 Lipoprotein leucine-zipper F_actin_bind PF08919.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.11 12.7 3.7 5.1 7.2 0.3 2.6 1 1 2 3 3 3 0 F-actin binding AAA_13 PF13166.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.12 11.0 6.7 0.17 10.5 6.7 1.2 1 0 0 1 1 1 0 AAA domain T3SS_needle_F PF09392.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.14 12.4 9.4 2.9 8.2 1.1 2.9 2 1 1 3 3 3 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF Nbl1_Borealin_N PF10444.9 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.16 11.6 3.9 1.7 8.4 0.2 3.5 4 0 0 4 4 4 0 Nbl1 / Borealin N terminal Tho2 PF11262.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.17 11.1 5.6 0.69 9.1 5.6 1.8 1 1 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 TerB_N PF13208.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.17 11.6 1.5 0.2 11.3 1.5 1.0 1 0 0 1 1 1 0 TerB N-terminal domain HalX PF08663.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.17 12.2 8.1 13 6.1 0.1 3.2 2 2 1 3 3 3 0 HalX domain Baculo_F PF12259.8 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.18 10.3 1.9 0.23 9.9 1.9 1.3 1 1 0 1 1 1 0 Baculovirus F protein Exonuc_VII_L PF02601.15 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.21 11.1 6.2 0.22 11.1 6.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4061 PF13270.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.23 11.8 5.1 0.091 13.1 1.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4061) PilJ PF13675.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.24 11.5 2.5 0.92 9.6 0.5 2.0 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term AI-2E_transport PF01594.16 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.28 10.3 0.2 0.57 9.3 0.2 1.7 1 1 0 1 1 1 0 AI-2E family transporter V-SNARE PF05008.15 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.28 11.6 10.6 3.1 8.2 1.4 3.2 1 1 2 3 3 3 0 Vesicle transport v-SNARE protein N-terminus NPV_P10 PF05531.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.3 11.6 8.9 1.1 9.8 4.5 2.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Med9 PF07544.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.31 11.2 9.3 22 5.2 7.5 3.2 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Goodbye PF17109.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.31 11.5 3.4 2.2 8.7 0.2 2.2 1 1 1 2 2 2 0 fungal STAND N-terminal Goodbye domain Phage_Mu_Gam PF07352.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.35 10.8 8.9 0.14 12.1 2.4 2.3 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein GrpE PF01025.19 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.38 10.4 10.6 0.65 9.6 10.6 1.4 1 1 0 1 1 1 0 GrpE FliT PF05400.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.45 11.4 6.7 1 10.2 1.1 2.2 1 1 1 2 2 2 0 Flagellar protein FliT NBD94 PF16830.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.5 10.8 9.9 0.38 11.2 2.2 2.5 1 1 0 2 2 2 0 Nucleotide-Binding Domain 94 of RH CorA PF01544.18 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.51 9.6 6.4 0.66 9.2 6.4 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein YtxH PF12732.7 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.55 10.8 4.8 16 6.1 4.8 2.5 1 1 0 1 1 1 0 YtxH-like protein Hpt PF01627.23 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.57 10.5 5.0 12 6.2 0.1 3.0 2 1 1 3 3 3 0 Hpt domain ZapB PF06005.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.9 10.0 12.8 49 4.5 12.8 2.6 1 1 0 1 1 1 0 Cell division protein ZapB DUF684 PF05075.14 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 0.95 8.4 6.0 0.16 10.9 0.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF684) DUF4140 PF13600.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1 9.9 8.1 2.7 8.5 0.4 2.6 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) SlyX PF04102.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.2 9.8 9.8 2 9.1 2.8 3.3 1 1 1 2 2 2 0 SlyX DUF16 PF01519.16 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.3 9.5 9.9 5.2 7.6 4.8 2.4 1 1 1 2 2 2 0 Protein of unknown function DUF16 ACCA PF03255.14 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.4 8.8 6.0 1.1 9.1 1.8 2.1 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Laminin_II PF06009.12 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.7 8.7 7.7 2 8.4 4.8 2.2 1 1 1 2 2 2 0 Laminin Domain II BST2 PF16716.5 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.7 9.3 13.5 0.65 10.6 1.2 3.0 1 1 1 3 3 3 0 Bone marrow stromal antigen 2 DHR10 PF18595.1 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.8 8.6 11.2 4.6 7.3 9.4 2.5 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Atg14 PF10186.9 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.9 7.5 8.3 11 4.9 8.3 1.9 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Occludin_ELL PF07303.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 1.9 9.3 6.5 7.8 7.3 5.1 2.2 1 1 1 2 2 2 0 Occludin homology domain FUSC-like PF12805.7 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 2.4 7.1 4.6 7 5.6 0.4 2.1 1 1 1 2 2 2 0 FUSC-like inner membrane protein yccS TMPIT PF07851.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 2.5 7.3 5.6 13 4.9 5.6 1.9 1 1 0 1 1 1 0 TMPIT-like protein SICA_alpha PF12887.7 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 2.5 7.9 6.0 1.5 8.7 2.4 2.1 1 1 1 2 2 2 0 SICA extracellular alpha domain Tup_N PF08581.10 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 3 8.2 8.3 0.38 11.1 0.6 2.6 2 1 1 3 3 3 0 Tup N-terminal FapA PF03961.13 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 5 5.6 7.3 8.7 4.8 7.3 1.5 1 1 0 1 1 1 0 Flagellar Assembly Protein A Csm1_N PF18504.1 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 5.2 7.5 10.6 0.8 10.1 2.2 2.6 1 1 2 3 3 3 0 Csm1 N-terminal domain OmpH PF03938.14 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 5.5 7.3 13.4 3.6 7.9 5.7 2.0 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) FlxA PF14282.6 NODE_49469_length_377_cov_2.388889_g41579_i0forward_frame_2 - 6.8 6.8 14.6 11 6.1 1.7 2.5 1 1 1 2 2 2 0 FlxA-like protein DNA_pol3_finger PF17657.1 NODE_49467_length_377_cov_2.418129_g41577_i0reverse_frame_2 - 0.099 12.0 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial DNA polymerase III alpha subunit finger domain CARMIL_C PF16000.5 NODE_49467_length_377_cov_2.418129_g41577_i0forward_frame_3 - 0.087 12.5 0.9 0.097 12.3 0.9 1.1 1 0 0 1 1 1 0 CARMIL C-terminus Aminotran_3 PF00202.21 NODE_49467_length_377_cov_2.418129_g41577_i0forward_frame_2 - 1.4e-21 76.7 0.1 1.5e-21 76.5 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III UPF0020 PF01170.18 NODE_49467_length_377_cov_2.418129_g41577_i0forward_frame_2 - 0.17 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 GAPES1 PF17155.4 NODE_49462_length_377_cov_2.877193_g41572_i0forward_frame_2 - 1.5e-40 139.3 0.6 1.8e-40 139.0 0.6 1.1 1 0 0 1 1 1 1 Gammaproteobacterial periplasmic sensor domain AbiTii PF18864.1 NODE_49459_length_377_cov_3.236842_g41569_i0reverse_frame_2 - 0.021 15.0 0.1 0.028 14.6 0.1 1.2 1 0 0 1 1 1 0 AbiTii DUF2703 PF10865.8 NODE_49458_length_377_cov_3.307018_g41568_i0reverse_frame_2 - 0.0073 16.5 2.2 0.0093 16.1 2.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF2703) DP PF08781.10 NODE_49455_length_377_cov_4.736842_g41565_i0forward_frame_2 - 4.8e-06 26.5 4.2 0.00039 20.3 4.2 2.0 1 1 0 1 1 1 1 Transcription factor DP Prokineticin PF06607.11 NODE_49441_length_377_cov_80.713450_g41551_i0forward_frame_2 - 0.067 13.5 4.0 0.86 10.0 0.0 2.5 1 1 2 3 3 3 0 Prokineticin VWA_N2 PF16164.5 NODE_49439_length_377_cov_84.497076_g41549_i0forward_frame_3 - 0.015 15.4 0.1 0.023 14.8 0.1 1.5 1 0 0 1 1 1 0 VWA N-terminal SPOB_a PF14689.6 NODE_49438_length_377_cov_89.470760_g41548_i0reverse_frame_2 - 0.17 11.6 0.4 0.27 11.0 0.4 1.2 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain DUF2070 PF09843.9 NODE_49438_length_377_cov_89.470760_g41548_i0reverse_frame_2 - 1.5 7.0 6.9 1.4 7.1 6.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4820 PF16091.5 NODE_49438_length_377_cov_89.470760_g41548_i0forward_frame_2 - 0.00067 19.1 4.8 0.00084 18.8 4.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4820) PAXIP1_C PF15364.6 NODE_49437_length_377_cov_91.274854_g41547_i0forward_frame_3 - 0.0069 16.7 4.1 0.0084 16.4 4.1 1.2 1 0 0 1 1 1 1 PAXIP1-associated-protein-1 C term PTIP binding protein UPF0086 PF01868.16 NODE_49437_length_377_cov_91.274854_g41547_i0forward_frame_3 - 0.0099 15.8 0.1 0.013 15.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Trp_oprn_chp PF09534.10 NODE_49431_length_377_cov_147.274854_g41541_i0reverse_frame_2 - 1.3 8.8 4.8 1.7 8.4 4.8 1.2 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) BatD PF13584.6 NODE_49431_length_377_cov_147.274854_g41541_i0forward_frame_3 - 0.13 11.0 1.6 0.18 10.6 1.6 1.2 1 0 0 1 1 1 0 Oxygen tolerance DUF3886 PF13025.6 NODE_49429_length_377_cov_182.388889_g41539_i0reverse_frame_2 - 0.018 15.2 8.0 0.078 13.2 7.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3886) Snapin_Pallidin PF14712.6 NODE_49429_length_377_cov_182.388889_g41539_i0reverse_frame_2 - 0.028 14.8 1.2 0.054 13.9 1.2 1.4 1 0 0 1 1 1 0 Snapin/Pallidin LCD1 PF09798.9 NODE_49429_length_377_cov_182.388889_g41539_i0reverse_frame_2 - 0.19 10.2 0.4 0.16 10.5 0.4 1.1 1 0 0 1 1 1 0 DNA damage checkpoint protein FAM153 PF15722.5 NODE_49425_length_377_cov_319.181287_g41535_i0forward_frame_3 - 0.016 15.6 0.0 0.095 13.0 0.0 1.9 1 1 1 2 2 2 0 FAM153 family Tnp_22_trimer PF17489.2 NODE_49425_length_377_cov_319.181287_g41535_i0forward_frame_3 - 0.22 11.5 3.5 1.5 8.9 0.3 2.7 1 1 1 2 2 2 0 L1 transposable element trimerization domain TRIQK PF15168.6 NODE_49421_length_377_cov_395.283626_g41531_i0forward_frame_2 - 0.013 15.3 0.5 0.024 14.5 0.5 1.4 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family Dpy-30 PF05186.13 NODE_49410_length_377_cov_29661.549708_g41523_i0forward_frame_2 - 0.11 12.2 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 Dpy-30 motif Propeptide_C1 PF08127.13 NODE_49409_length_377_cov_228901.140351_g41522_i0reverse_frame_3 - 0.00043 20.1 0.0 0.0011 18.8 0.0 1.6 1 1 0 1 1 1 1 Peptidase family C1 propeptide INCA1 PF15142.6 NODE_49406_length_378_cov_1.472303_g41519_i0reverse_frame_2 - 0.041 13.9 4.1 0.057 13.4 4.1 1.2 1 0 0 1 1 1 0 INCA1 Herpes_LMP1 PF05297.11 NODE_49402_length_378_cov_2.212828_g41515_i0reverse_frame_3 - 1.5 8.0 3.8 1.5 8.0 3.8 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Ribophorin_I PF04597.14 NODE_49400_length_378_cov_2.241983_g41513_i0forward_frame_3 - 1.6e-06 27.6 0.5 1.7e-06 27.5 0.5 1.0 1 0 0 1 1 1 1 Ribophorin I Pkinase PF00069.25 NODE_49396_length_378_cov_2.355685_g41509_i0reverse_frame_2 - 9.2e-20 71.1 0.0 1e-19 70.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49396_length_378_cov_2.355685_g41509_i0reverse_frame_2 - 3.2e-05 23.4 0.0 3.6e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Olduvai PF06758.13 NODE_49392_length_378_cov_2.737609_g41505_i0reverse_frame_2 - 0.078 13.3 1.7 0.11 12.8 0.4 1.9 2 0 0 2 2 2 0 Olduvai domain GAPT PF11770.8 NODE_49392_length_378_cov_2.737609_g41505_i0forward_frame_2 - 0.064 13.1 2.1 0.24 11.2 0.6 2.1 2 0 0 2 2 2 0 GRB2-binding adapter (GAPT) UPF0728 PF15092.6 NODE_49391_length_378_cov_2.836735_g41504_i0reverse_frame_3 - 0.036 13.9 0.3 0.053 13.4 0.3 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 Myosin_TH1 PF06017.13 NODE_49389_length_378_cov_2.895044_g41502_i0forward_frame_3 - 5.8e-12 45.7 0.1 6.7e-12 45.5 0.1 1.1 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding PH_3 PF14593.6 NODE_49389_length_378_cov_2.895044_g41502_i0forward_frame_3 - 0.00072 19.6 0.4 0.0011 19.1 0.4 1.3 1 0 0 1 1 1 1 PH domain DUF267 PF03268.14 NODE_49389_length_378_cov_2.895044_g41502_i0forward_frame_2 - 0.03 13.2 0.2 0.034 13.0 0.2 1.0 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF267 Zea_mays_MuDR PF05928.11 NODE_49388_length_378_cov_2.947522_g41501_i0reverse_frame_3 - 0.22 11.2 0.2 0.25 11.0 0.2 1.1 1 0 0 1 1 1 0 Zea mays MURB-like protein (MuDR) FAM193_C PF15914.5 NODE_49387_length_378_cov_3.612245_g41500_i0reverse_frame_3 - 0.16 11.7 1.0 0.38 10.5 1.0 1.6 1 0 0 1 1 1 0 FAM193 family C-terminal zf-Sec23_Sec24 PF04810.15 NODE_49387_length_378_cov_3.612245_g41500_i0forward_frame_3 - 0.031 14.3 0.3 0.031 14.3 0.3 3.1 2 1 0 2 2 2 0 Sec23/Sec24 zinc finger MORN PF02493.20 NODE_49384_length_378_cov_4.206997_g41497_i0reverse_frame_3 - 5.2e-10 38.6 20.7 0.00029 20.6 0.3 5.2 6 0 0 6 6 6 4 MORN repeat Tudor_2 PF18104.1 NODE_49384_length_378_cov_4.206997_g41497_i0reverse_frame_3 - 0.06 13.0 5.0 0.072 12.8 0.0 3.2 3 1 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain Auts2 PF15336.6 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 0.54 10.3 15.5 0.81 9.8 15.5 1.3 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Connexin PF00029.19 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 1.9 8.2 6.3 2.3 7.9 6.3 1.1 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 2.3 6.9 5.1 2.2 7.0 5.1 1.0 1 0 0 1 1 1 0 Presenilin TT_ORF1 PF02956.14 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 3 6.4 6.6 3.1 6.4 6.6 1.1 1 0 0 1 1 1 0 TT viral orf 1 DUF2058 PF09831.9 NODE_49378_length_378_cov_56.145773_g41491_i0reverse_frame_2 - 3.6 7.7 13.8 4.3 7.5 13.8 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2058) VEFS-Box PF09733.9 NODE_49375_length_378_cov_61.390671_g41488_i0forward_frame_3 - 0.015 15.1 0.2 0.019 14.8 0.2 1.2 1 0 0 1 1 1 0 VEFS-Box of polycomb protein Fib_alpha PF08702.10 NODE_49375_length_378_cov_61.390671_g41488_i0forward_frame_2 - 0.052 13.7 4.1 0.064 13.4 4.1 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Coatomer_b_Cpla PF14806.6 NODE_49374_length_378_cov_62.376093_g41487_i0reverse_frame_3 - 1.2e-37 128.7 0.0 1.5e-37 128.4 0.0 1.0 1 0 0 1 1 1 1 Coatomer beta subunit appendage platform Ribosom_S12_S23 PF00164.25 NODE_49373_length_378_cov_63.215743_g41486_i0reverse_frame_2 - 1.3e-43 147.2 0.8 1.9e-43 146.7 0.8 1.2 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Transthyretin PF00576.21 NODE_49372_length_378_cov_64.358601_g41485_i0reverse_frame_2 - 1.4e-21 77.2 0.1 2e-21 76.7 0.1 1.2 1 0 0 1 1 1 1 HIUase/Transthyretin family DUF728 PF05304.12 NODE_49372_length_378_cov_64.358601_g41485_i0forward_frame_2 - 0.09 12.6 0.2 0.11 12.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) CASP_C PF08172.12 NODE_49369_length_378_cov_74.355685_g41482_i0reverse_frame_2 - 0.02 14.2 0.2 0.023 14.0 0.2 1.1 1 0 0 1 1 1 0 CASP C terminal FAM176 PF14851.6 NODE_49369_length_378_cov_74.355685_g41482_i0forward_frame_3 - 0.33 10.6 0.5 0.5 10.0 0.5 1.2 1 0 0 1 1 1 0 FAM176 family Robl_LC7 PF03259.17 NODE_49364_length_378_cov_78.918367_g41477_i0reverse_frame_3 - 0.12 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Roadblock/LC7 domain MCR PF18509.1 NODE_49360_length_378_cov_86.419825_g41473_i0forward_frame_3 - 0.16 11.6 1.1 0.26 10.9 1.1 1.4 1 0 0 1 1 1 0 Magnetochrome domain FAP PF07174.11 NODE_49357_length_378_cov_93.282799_g41470_i0forward_frame_3 - 0.96 8.8 11.8 1.1 8.7 11.8 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) PPR_2 PF13041.6 NODE_49356_length_378_cov_100.384840_g41469_i0reverse_frame_2 - 7.6e-08 32.4 0.0 0.00037 20.6 0.0 2.1 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_49356_length_378_cov_100.384840_g41469_i0reverse_frame_2 - 0.00063 19.8 0.0 0.0046 17.0 0.0 1.9 1 1 0 2 2 2 1 Pentatricopeptide repeat domain PPR PF01535.20 NODE_49356_length_378_cov_100.384840_g41469_i0reverse_frame_2 - 0.0014 18.8 0.0 0.45 10.9 0.0 2.3 2 0 0 2 2 2 2 PPR repeat PPR_long PF17177.4 NODE_49356_length_378_cov_100.384840_g41469_i0reverse_frame_2 - 0.16 11.3 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP DUF4573 PF15140.6 NODE_49355_length_378_cov_105.892128_g41468_i0reverse_frame_3 - 0.0062 16.4 2.2 0.0082 16.0 2.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4573) HscB_4_cys PF18256.1 NODE_49355_length_378_cov_105.892128_g41468_i0reverse_frame_2 - 0.086 12.7 1.1 0.18 11.7 1.1 1.5 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif Como_SCP PF02248.16 NODE_49353_length_378_cov_118.760933_g41466_i0reverse_frame_2 - 0.027 14.1 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Small coat protein Isochorismatase PF00857.20 NODE_49350_length_378_cov_137.128280_g41463_i0forward_frame_2 - 3.1e-11 43.8 0.0 4.3e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family Arteri_Gl PF00951.18 NODE_49350_length_378_cov_137.128280_g41463_i0forward_frame_2 - 0.027 14.3 0.1 0.038 13.8 0.1 1.2 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein Glucosamine_iso PF01182.20 NODE_49349_length_378_cov_137.903790_g41462_i0forward_frame_3 - 0.084 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Methyltransf_24 PF13578.6 NODE_49347_length_378_cov_144.460641_g41460_i0reverse_frame_3 - 9.8e-07 29.8 0.0 1.3e-06 29.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_49347_length_378_cov_144.460641_g41460_i0reverse_frame_3 - 0.21 11.4 0.0 0.25 11.1 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Ammonium_transp PF00909.21 NODE_49346_length_378_cov_209.469388_g41459_i0reverse_frame_3 - 0.075 11.7 0.5 0.086 11.5 0.5 1.0 1 0 0 1 1 1 0 Ammonium Transporter Family HEAT PF02985.22 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 4.9e-10 38.8 6.0 0.00063 19.8 0.0 3.3 3 0 0 3 3 3 2 HEAT repeat HEAT_EZ PF13513.6 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 4.5e-07 30.2 12.2 0.0042 17.6 6.5 2.2 2 0 0 2 2 2 2 HEAT-like repeat HEAT_2 PF13646.6 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 6.2e-07 29.7 7.6 9.7e-07 29.1 7.6 1.3 1 0 0 1 1 1 1 HEAT repeats Cnd1 PF12717.7 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 1.3e-06 28.6 0.0 1.5e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 0.0048 15.5 0.5 0.0058 15.2 0.5 1.0 1 0 0 1 1 1 1 Adaptin N terminal region CLASP_N PF12348.8 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 0.039 13.5 0.2 0.43 10.1 0.2 2.0 1 1 0 1 1 1 0 CLASP N terminal Arm PF00514.23 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 0.057 13.5 6.0 2.8 8.1 0.2 3.0 2 1 1 3 3 3 0 Armadillo/beta-catenin-like repeat Cohesin_HEAT PF12765.7 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 0.091 13.1 1.5 0.9 9.9 0.3 2.2 2 0 0 2 2 2 0 HEAT repeat associated with sister chromatid cohesion HEAT_PBS PF03130.16 NODE_49346_length_378_cov_209.469388_g41459_i0forward_frame_3 - 2.9 8.8 12.9 5.6 7.9 0.1 3.5 3 0 0 3 3 3 0 PBS lyase HEAT-like repeat Rpr2 PF04032.16 NODE_49344_length_378_cov_224.323615_g41457_i0forward_frame_2 - 0.61 10.4 7.6 2.5 8.5 6.9 2.2 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Skp1_POZ PF03931.15 NODE_49341_length_378_cov_440.650146_g41454_i0reverse_frame_3 - 7.8e-08 32.4 3.7 2.2e-07 31.0 0.6 2.1 2 0 0 2 2 2 1 Skp1 family, tetramerisation domain Mrpl_C PF18502.1 NODE_49341_length_378_cov_440.650146_g41454_i0reverse_frame_3 - 0.042 14.1 1.4 0.048 13.9 1.4 1.2 1 0 0 1 1 1 0 54S ribosomal protein L8 C-terminal domain Orthopox_F8 PF05886.11 NODE_49340_length_378_cov_465.565598_g41453_i0reverse_frame_3 - 0.079 13.1 2.2 0.88 9.8 1.5 2.2 2 0 0 2 2 2 0 Orthopoxvirus F8 protein SCO1-SenC PF02630.14 NODE_49340_length_378_cov_465.565598_g41453_i0reverse_frame_3 - 0.15 11.9 0.2 0.21 11.5 0.2 1.2 1 0 0 1 1 1 0 SCO1/SenC DUF4599 PF15371.6 NODE_49338_length_378_cov_1840.151603_g41451_i0reverse_frame_3 - 0.15 12.6 1.3 0.22 12.1 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4599) Calcyon PF06387.11 NODE_49336_length_378_cov_8888.685131_g41449_i0reverse_frame_3 - 0.83 9.6 4.9 9.6 6.1 0.3 2.7 1 1 3 4 4 4 0 D1 dopamine receptor-interacting protein (calcyon) SCA7 PF08313.12 ORF99324 - 0.032 14.1 1.1 0.049 13.5 1.1 1.3 1 0 0 1 1 1 0 SCA7, zinc-binding domain DUF2752 PF10825.8 ORF99002 - 4.1 7.5 6.7 1.9 8.6 2.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) Shisa PF13908.6 ORF98444 - 0.0012 19.2 2.0 0.0013 19.0 2.0 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Phage_holin_3_6 PF07332.11 ORF98444 - 0.013 15.5 9.6 0.019 15.0 9.6 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF1700 PF08006.11 ORF98444 - 0.041 13.4 4.6 0.043 13.3 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Amnionless PF14828.6 ORF98444 - 0.2 10.5 2.5 0.24 10.2 2.5 1.2 1 0 0 1 1 1 0 Amnionless DUF4349 PF14257.6 ORF98444 - 0.25 10.8 6.6 0.34 10.3 6.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF2207 PF09972.9 ORF98444 - 0.34 9.6 1.7 0.35 9.6 1.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Hanta_G2 PF01561.16 ORF98444 - 0.56 8.8 3.1 0.82 8.2 3.1 1.3 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 VirB3 PF05101.13 ORF98444 - 6.2 7.1 9.4 10 6.4 9.4 1.3 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF3089 PF11288.8 ORF97576 - 0.12 12.0 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) DUF641 PF04859.12 ORF96567 - 0.0045 17.3 1.5 0.0086 16.4 1.2 1.5 1 1 1 2 2 2 1 Plant protein of unknown function (DUF641) Fib_alpha PF08702.10 ORF96567 - 0.19 11.9 3.4 0.26 11.5 3.4 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family zf-RING_2 PF13639.6 ORF95914 - 7.2e-11 42.2 6.0 1e-10 41.7 6.0 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF95914 - 5.7e-07 29.3 5.2 1.1e-06 28.4 5.2 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF95914 - 5.9e-07 29.7 7.8 1.4e-06 28.4 7.8 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF95914 - 2.2e-06 27.5 4.9 3.1e-06 27.1 4.9 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF95914 - 4.1e-05 23.4 4.7 6e-05 22.8 4.7 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF95914 - 4.6e-05 23.4 1.0 6.2e-05 23.0 1.0 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 ORF95914 - 8e-05 22.3 4.6 8e-05 22.3 4.6 2.3 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF95914 - 0.00011 21.9 5.5 0.00018 21.3 5.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF95914 - 0.00054 19.9 2.9 0.0013 18.7 0.7 2.3 1 1 1 2 2 2 1 RING-type zinc-finger RINGv PF12906.7 ORF95914 - 0.0014 18.7 6.6 0.0021 18.1 6.6 1.3 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF95914 - 0.0014 18.8 4.5 0.013 15.7 1.4 2.1 1 1 1 2 2 2 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF95914 - 0.0023 17.8 3.2 0.0043 16.9 3.2 1.5 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF95914 - 0.034 13.8 4.2 0.051 13.2 4.2 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Baculo_RING PF05883.11 ORF95914 - 0.27 11.2 2.2 0.32 11.0 1.7 1.3 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain DUF3797 PF12677.7 ORF95914 - 0.46 10.4 4.3 0.69 9.9 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) DUF692 PF05114.13 ORF95676 - 0.044 13.0 0.0 0.054 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF692) Hus1 PF04005.12 ORF94137 - 0.00058 19.1 0.0 0.00088 18.5 0.0 1.3 1 1 0 1 1 1 1 Hus1-like protein DUF2635 PF10948.8 ORF94137 - 0.14 11.9 0.1 0.22 11.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2635) VESA1_N PF12785.7 ORF94137 - 0.27 10.1 0.0 0.33 9.9 0.0 1.1 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 DUF3658 PF12395.8 ORF92416 - 0.064 13.2 0.3 0.093 12.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function Clat_adaptor_s PF01217.20 ORF92194 - 5.1e-39 133.4 1.4 5.9e-39 133.2 1.4 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain Augurin PF15187.6 ORF9208 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF9208 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin DUF3432 PF11914.8 ORF92052 - 0.16 12.2 4.7 0.25 11.6 4.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3432) Augurin PF15187.6 ORF90832 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF90832 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin DUF3287 PF11690.8 ORF89147 - 0.00047 19.9 0.9 0.00071 19.3 0.8 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3287) DUF1340 PF07067.11 ORF89147 - 0.0075 15.7 1.2 0.0086 15.5 1.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1340) HEPN_AbiV PF18728.1 ORF89147 - 0.04 14.1 2.4 0.051 13.7 2.4 1.2 1 0 0 1 1 1 0 AbiV DUF4266 PF14086.6 ORF89147 - 0.087 13.8 0.1 0.24 12.4 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4266) PPE PF00823.19 ORF88046 - 0.016 15.3 0.0 0.028 14.5 0.0 1.3 2 0 0 2 2 2 0 PPE family Bac_export_2 PF01312.19 ORF86921 - 0.045 13.0 1.6 0.047 12.9 1.6 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family Sec20 PF03908.13 ORF86356 - 0.07 13.1 1.1 0.12 12.3 1.1 1.5 1 1 0 1 1 1 0 Sec20 ABC_tran PF00005.27 ORF85307 - 1.4e-08 35.3 0.0 2.4e-08 34.6 0.0 1.4 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF85307 - 0.0092 15.8 0.0 0.012 15.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DNA_topoisoIV PF00521.20 ORF8526 - 0.0095 14.9 1.2 0.011 14.7 1.2 1.0 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A LidA_Long_CC PF18641.1 ORF8526 - 0.014 15.4 0.5 0.014 15.4 0.5 1.8 2 0 0 2 2 2 0 LidA long coiled-coil domain Herpes_U15 PF05613.11 ORF85067 - 0.029 15.1 2.7 0.029 15.1 2.7 1.8 1 1 1 2 2 2 0 Human herpesvirus U15 protein UPF0139 PF03669.13 ORF85067 - 0.26 11.2 2.5 0.39 10.6 2.5 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) DUF2070 PF09843.9 ORF85067 - 4.3 5.5 10.3 4.5 5.4 10.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) RMF PF04957.12 ORF84788 - 0.37 11.0 3.0 4.5 7.6 0.2 2.4 1 1 1 2 2 2 0 Ribosome modulation factor OpgC_C PF10129.9 ORF83833 - 0.011 14.7 0.0 0.012 14.5 0.0 1.1 1 0 0 1 1 1 0 OpgC protein DUF4547 PF15080.6 ORF82651 - 0.034 13.8 0.8 0.041 13.5 0.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4547) Ciart PF15673.5 ORF81994 - 0.057 12.8 0.0 0.066 12.6 0.0 1.0 1 0 0 1 1 1 0 Circadian-associated transcriptional repressor Glyco_hydro_52 PF03512.13 ORF81498 - 0.032 13.2 0.0 0.042 12.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 52 YdaS_antitoxin PF15943.5 ORF8052 - 0.36 10.7 3.0 2.5 8.0 0.2 2.6 3 0 0 3 3 3 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT IMPDH PF00478.25 ORF79619 - 0.015 14.3 0.4 0.016 14.2 0.4 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Phage_holin_3_3 PF16083.5 ORF79619 - 0.12 12.5 0.2 0.12 12.5 0.2 2.5 2 1 0 2 2 2 0 LydA holin phage, holin superfamily III EBA-175_VI PF11556.8 ORF78466 - 1 9.7 9.4 0.3 11.4 6.8 1.5 1 1 0 1 1 1 0 Erythrocyte binding antigen 175 YrhK PF14145.6 ORF75970 - 0.00037 20.3 1.6 0.00059 19.6 1.6 1.3 1 0 0 1 1 1 1 YrhK-like protein DUF1039 PF06287.11 ORF75083 - 0.088 13.2 0.1 0.15 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1039) DUF2014 PF09427.10 ORF74922 - 0.044 13.1 0.0 0.056 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2014) LIP1 PF15904.5 ORF74873 - 0.11 12.9 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 Atracotoxin PF05353.11 ORF74073 - 0.031 14.3 0.5 0.075 13.1 0.5 1.7 1 0 0 1 1 1 0 Delta Atracotoxin Fer4_10 PF13237.6 ORF73784 - 0.0072 16.4 1.9 0.0072 16.4 1.9 1.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 ORF73784 - 0.014 15.2 3.2 0.034 14.0 3.2 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_2 PF12797.7 ORF73784 - 0.017 15.2 4.7 0.077 13.1 4.7 2.2 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_6 PF12837.7 ORF73784 - 0.039 14.0 3.9 0.039 14.0 3.9 2.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_9 PF13187.6 ORF73784 - 0.049 13.8 7.1 0.089 13.0 7.1 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF73784 - 0.051 14.1 3.4 0.051 14.1 3.4 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 ORF73784 - 0.2 12.1 9.1 0.2 12.1 8.5 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 ORF73784 - 0.6 10.7 5.0 1.1 9.8 5.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_7 PF12838.7 ORF73784 - 1.3 9.6 9.4 3.1 8.4 9.4 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain BPD_transp_2 PF02653.16 ORF71887 - 7.9e-14 51.4 15.7 9.1e-14 51.3 15.7 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component DUF2205 PF10224.9 ORF70828 - 0.00034 20.6 1.5 0.00054 19.9 1.3 1.5 1 1 0 1 1 1 1 Short coiled-coil protein YabA PF06156.13 ORF70828 - 0.0065 17.1 2.0 0.009 16.6 2.0 1.2 1 0 0 1 1 1 1 Initiation control protein YabA HALZ PF02183.18 ORF70828 - 0.054 13.7 4.0 0.2 11.9 4.0 2.1 2 1 0 2 2 2 0 Homeobox associated leucine zipper CCDC-167 PF15188.6 ORF70828 - 0.092 13.1 2.0 0.15 12.4 2.0 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Pkinase PF00069.25 ORF65506 - 0.00055 19.4 0.0 0.00066 19.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF3432 PF11914.8 ORF64901 - 0.34 11.2 4.1 0.34 11.2 0.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3432) Augurin PF15187.6 ORF63731 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF63731 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin AAA_2 PF07724.14 ORF62821 - 0.064 13.4 0.0 0.07 13.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Vac17 PF17321.2 ORF61804 - 0.071 12.6 0.8 0.08 12.4 0.8 1.0 1 0 0 1 1 1 0 Vacuole-related protein 17 Pkinase PF00069.25 ORF60045 - 0.00055 19.4 0.0 0.00066 19.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain EF-hand_1 PF00036.32 ORF5896 - 1.6e-17 61.6 11.1 4.5e-07 29.0 2.1 4.0 4 0 0 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF5896 - 1.1e-16 61.0 9.1 2.7e-13 50.1 5.2 2.0 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF5896 - 1.3e-15 57.0 5.5 5.1e-12 45.4 0.7 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF5896 - 1.1e-12 46.7 4.1 0.00018 21.2 0.1 3.9 4 1 0 4 4 4 3 EF-hand domain EF-hand_9 PF14658.6 ORF5896 - 4e-06 27.1 0.1 7.8e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF5896 - 9.5e-05 21.7 8.6 0.012 15.1 2.9 3.0 2 1 1 3 3 3 2 EF hand EF-hand_4 PF12763.7 ORF5896 - 0.01 15.8 0.9 0.024 14.6 0.6 1.8 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand PhetRS_B1 PF18262.1 ORF5896 - 0.014 15.6 0.5 0.028 14.7 0.5 1.6 1 0 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain HTH_40 PF14493.6 ORF5896 - 0.036 14.5 0.1 0.065 13.7 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain GAS2 PF02187.17 ORF58399 - 0.083 13.0 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Growth-Arrest-Specific Protein 2 Domain Fer2_3 PF13085.6 ORF57096 - 0.057 13.4 0.1 0.099 12.7 0.1 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain FerA PF08165.11 ORF56082 - 0.15 12.1 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 FerA (NUC095) domain Med31 PF05669.12 ORF55868 - 7.3e-30 102.8 10.7 9.7e-30 102.4 10.7 1.1 1 0 0 1 1 1 1 SOH1 Daxx PF03344.15 ORF55868 - 0.056 13.5 0.3 1.6 8.9 0.1 2.5 1 1 2 3 3 3 0 Daxx N-terminal Rassf1C-interacting domain CENP-F_leu_zip PF10473.9 ORF5537 - 0.0021 18.1 13.7 0.0028 17.7 13.7 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HSP70 PF00012.20 ORF5537 - 0.0077 14.5 12.1 0.01 14.1 12.1 1.2 1 0 0 1 1 1 1 Hsp70 protein DUF3552 PF12072.8 ORF5537 - 0.02 14.3 17.1 0.025 14.0 17.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TMF_DNA_bd PF12329.8 ORF5537 - 0.032 14.2 24.6 0.23 11.5 14.4 2.7 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding COMP PF11598.8 ORF5537 - 0.066 13.7 4.5 1.4 9.5 0.0 3.1 3 0 0 3 3 3 0 Cartilage oligomeric matrix protein FliD_C PF07195.12 ORF5537 - 0.072 12.5 10.9 0.051 13.0 8.4 1.8 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Nup88 PF10168.9 ORF5537 - 0.081 10.7 13.4 0.095 10.5 13.4 1.0 1 0 0 1 1 1 0 Nuclear pore component End3 PF12761.7 ORF5537 - 0.14 12.3 16.1 0.039 14.1 9.8 2.0 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 DUF4407 PF14362.6 ORF5537 - 0.19 11.0 7.4 0.25 10.7 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CHASE6_C PF17150.4 ORF5537 - 0.2 12.3 7.9 0.81 10.4 2.3 2.3 1 1 1 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain BLOC1_2 PF10046.9 ORF5537 - 0.26 11.6 17.7 0.42 10.9 11.9 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF3450 PF11932.8 ORF5537 - 0.28 10.5 12.9 0.69 9.2 12.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 ORF5537 - 0.28 10.7 8.6 0.34 10.4 8.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Atg14 PF10186.9 ORF5537 - 0.33 10.0 13.3 0.38 9.8 13.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 MMPL PF03176.15 ORF5537 - 0.39 9.6 1.3 0.46 9.4 1.3 1.1 1 0 0 1 1 1 0 MMPL family Tropomyosin_1 PF12718.7 ORF5537 - 0.43 10.7 18.9 0.37 11.0 17.7 1.5 1 1 0 1 1 1 0 Tropomyosin like USP8_interact PF08941.10 ORF5537 - 0.47 10.2 9.5 2.9 7.7 5.8 2.1 1 1 1 2 2 2 0 USP8 interacting GBP_C PF02841.14 ORF5537 - 0.5 9.7 18.0 0.6 9.5 18.0 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF4795 PF16043.5 ORF5537 - 0.54 9.8 17.5 1.7 8.2 3.3 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Fib_alpha PF08702.10 ORF5537 - 0.57 10.4 16.5 9.2 6.4 13.6 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF5537 - 0.75 10.3 14.7 0.12 12.9 8.2 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 TMPIT PF07851.13 ORF5537 - 0.98 8.6 11.6 1.2 8.3 11.6 1.2 1 0 0 1 1 1 0 TMPIT-like protein Cut12 PF11500.8 ORF5537 - 1.1 9.1 15.1 1.3 8.9 3.8 2.2 1 1 1 2 2 2 0 Spindle pole body formation-associated protein ALMT PF11744.8 ORF5537 - 1.4 7.6 10.1 1.5 7.6 10.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF2203 PF09969.9 ORF5537 - 1.6 9.5 11.5 4.4 8.0 9.5 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) APG6_N PF17675.1 ORF5537 - 1.6 9.2 15.1 2.3 8.8 15.1 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region FAM76 PF16046.5 ORF5537 - 1.8 7.9 17.3 2.7 7.3 17.3 1.3 1 1 0 1 1 1 0 FAM76 protein DUF641 PF04859.12 ORF5537 - 1.9 8.8 14.3 1 9.7 7.6 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) CPSase_L_D3 PF02787.19 ORF5537 - 2 8.8 8.0 6.4 7.1 8.0 1.8 1 1 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Erf4 PF10256.9 ORF5537 - 2.7 8.1 6.1 15 5.7 0.5 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 7/ERF4 family DUF1664 PF07889.12 ORF5537 - 3.1 7.8 10.8 4.3 7.4 8.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF724 PF05266.14 ORF5537 - 4.1 7.2 15.1 6 6.6 15.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Med4 PF10018.9 ORF5537 - 4.6 6.9 14.3 9.2 5.9 14.4 1.5 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF4094 PF13334.6 ORF5537 - 5.2 7.6 9.2 0.86 10.1 4.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) CREPT PF16566.5 ORF5537 - 5.6 7.1 13.8 10 6.3 13.4 1.4 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour Fzo_mitofusin PF04799.13 ORF5537 - 5.8 6.4 10.5 10 5.6 6.3 2.2 1 1 1 2 2 2 0 fzo-like conserved region DUF4996 PF16387.5 ORF54935 - 0.017 15.6 0.1 0.022 15.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function RecO_C PF02565.15 ORF53986 - 0.047 13.5 0.5 0.065 13.0 0.5 1.2 1 0 0 1 1 1 0 Recombination protein O C terminal 5_nucleotid_C PF02872.18 ORF52960 - 0.13 12.5 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 5'-nucleotidase, C-terminal domain LMBR1 PF04791.16 ORF52960 - 2.1 7.2 5.5 2.2 7.1 5.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Shisa PF13908.6 ORF5078 - 0.0012 19.2 2.0 0.0013 19.0 2.0 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Phage_holin_3_6 PF07332.11 ORF5078 - 0.013 15.5 9.6 0.019 15.0 9.6 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF1700 PF08006.11 ORF5078 - 0.041 13.4 4.6 0.043 13.3 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Amnionless PF14828.6 ORF5078 - 0.2 10.5 2.5 0.24 10.2 2.5 1.2 1 0 0 1 1 1 0 Amnionless DUF4349 PF14257.6 ORF5078 - 0.25 10.8 6.6 0.34 10.3 6.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF2207 PF09972.9 ORF5078 - 0.34 9.6 1.7 0.35 9.6 1.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Hanta_G2 PF01561.16 ORF5078 - 0.56 8.8 3.1 0.82 8.2 3.1 1.3 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 VirB3 PF05101.13 ORF5078 - 6.2 7.1 9.4 10 6.4 9.4 1.3 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF1360 PF07098.11 ORF50230 - 0.046 13.7 0.0 0.064 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) FCD PF07729.12 ORF50172 - 1.1e-20 74.3 3.5 1.4e-20 74.0 3.5 1.1 1 0 0 1 1 1 1 FCD domain Imm49 PF15575.6 ORF50172 - 4.9e-05 23.2 0.8 5.4e-05 23.1 0.8 1.2 1 0 0 1 1 1 1 Immunity protein 49 THP2 PF09432.10 ORF50172 - 0.038 14.1 0.7 2.4 8.2 0.1 2.1 1 1 1 2 2 2 0 Tho complex subunit THP2 FliT PF05400.13 ORF50172 - 0.056 14.3 2.3 0.62 10.9 1.8 2.2 1 1 0 1 1 1 0 Flagellar protein FliT DUF1825 PF08855.10 ORF50172 - 0.072 13.0 1.4 0.083 12.8 0.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1825) FadR_C PF07840.12 ORF50172 - 0.079 12.9 0.1 0.092 12.6 0.1 1.1 1 0 0 1 1 1 0 FadR C-terminal domain ArfGap PF01412.18 ORF49180 - 0.044 13.9 0.0 0.068 13.2 0.0 1.5 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Activator_LAG-3 PF11498.8 ORF45478 - 0.018 14.0 0.9 0.023 13.7 0.5 1.3 1 1 0 1 1 1 0 Transcriptional activator LAG-3 JmjN PF02375.17 ORF45478 - 0.089 12.8 0.1 0.28 11.2 0.1 1.8 2 0 0 2 2 2 0 jmjN domain LIP1 PF15904.5 ORF43776 - 0.11 12.9 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 Amelin PF05111.12 ORF42459 - 0.69 9.0 6.7 0.75 8.9 6.7 1.0 1 0 0 1 1 1 0 Ameloblastin precursor (Amelin) NAD_Gly3P_dh_C PF07479.14 ORF42312 - 0.22 11.8 0.0 0.29 11.4 0.0 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TOH_N PF12549.8 ORF41436 - 0.2 11.5 4.9 0.36 10.7 0.0 3.1 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal DUF2149 PF09919.9 ORF3741 - 0.056 13.7 0.0 0.074 13.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) DAPDH_C PF16654.5 ORF37353 - 0.099 12.5 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Diaminopimelic acid dehydrogenase C-terminal domain zf-RING_2 PF13639.6 ORF35706 - 1.3e-11 44.6 5.0 1.9e-11 44.1 5.0 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF35706 - 5.2e-07 29.9 7.1 1.1e-06 28.8 7.1 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF35706 - 5.9e-07 29.2 5.1 1.2e-06 28.2 5.1 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF35706 - 1e-06 28.4 2.6 1e-06 28.4 2.6 2.3 3 0 0 3 3 3 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF35706 - 3.7e-06 26.8 3.7 5.3e-06 26.3 3.7 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF35706 - 4e-05 23.6 0.8 5.4e-05 23.2 0.8 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF35706 - 0.00014 21.7 3.9 0.00021 21.1 3.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF35706 - 0.00039 20.2 4.4 0.00066 19.5 4.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF35706 - 0.00088 19.2 3.0 0.0021 18.0 0.7 2.3 1 1 1 2 2 2 1 RING-type zinc-finger FANCL_C PF11793.8 ORF35706 - 0.00096 19.3 3.6 0.012 15.8 0.9 2.2 1 1 1 2 2 2 1 FANCL C-terminal domain RINGv PF12906.7 ORF35706 - 0.0012 18.9 6.2 0.0019 18.3 6.2 1.3 1 0 0 1 1 1 1 RING-variant domain Prok-RING_4 PF14447.6 ORF35706 - 0.0066 16.3 3.7 0.012 15.5 3.7 1.5 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 Baculo_RING PF05883.11 ORF35706 - 0.017 15.1 1.2 0.02 14.9 0.9 1.3 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain Zn_ribbon_17 PF17120.5 ORF35706 - 0.018 14.7 3.6 0.028 14.0 3.6 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3H2C3 PF17122.5 ORF35706 - 0.3 11.2 2.3 0.59 10.2 2.3 1.6 1 1 0 1 1 1 0 Zinc-finger DUF3797 PF12677.7 ORF35706 - 0.33 10.9 3.5 0.69 9.8 0.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) Inh PF02974.14 ORF34146 - 0.0086 16.1 0.9 0.012 15.6 0.9 1.3 1 0 0 1 1 1 1 Protease inhibitor Inh AidB_N PF18158.1 ORF34146 - 0.12 12.3 0.3 0.13 12.2 0.3 1.4 1 1 0 1 1 1 0 Adaptive response protein AidB N-terminal domain SNCAIP_SNCA_bd PF16700.5 ORF34076 - 0.046 13.5 0.2 7.7 6.3 0.0 2.5 2 0 0 2 2 2 0 Synphilin-1 alpha-Synuclein-binding domain Fer4_22 PF17179.4 ORF34076 - 0.42 11.5 2.6 0.9 10.4 0.4 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain p31comet PF06581.12 ORF32993 - 0.073 12.2 0.0 0.08 12.1 0.0 1.1 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding DUF4021 PF13213.6 ORF32511 - 0.041 13.9 0.0 4.9 7.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4021) zf-LITAF-like PF10601.9 ORF32364 - 7.6e-10 38.9 24.9 1e-09 38.5 24.9 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain RabGAP-TBC PF00566.18 ORF31007 - 1.3 8.6 11.2 0.077 12.6 4.6 1.8 1 1 1 2 2 2 0 Rab-GTPase-TBC domain DUF4752 PF15944.5 ORF27536 - 0.014 15.4 0.2 0.02 14.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) Wzz PF02706.15 ORF26467 - 7.3 7.0 7.1 4.2 7.7 3.1 2.0 2 0 0 2 2 2 0 Chain length determinant protein DJ-1_PfpI PF01965.24 ORF25694 - 1.3e-21 77.2 0.0 1.4e-21 77.0 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family HTH_52 PF18576.1 ORF23325 - 3.2 8.0 5.7 5 7.4 0.6 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain FAST_1 PF06743.15 ORF23184 - 0.12 12.3 1.6 2.1 8.4 0.3 2.2 1 1 1 2 2 2 0 FAST kinase-like protein, subdomain 1 PRMT5_C PF17286.2 ORF23006 - 3.9e-36 124.6 3.4 4.6e-36 124.3 3.4 1.1 1 0 0 1 1 1 1 PRMT5 oligomerisation domain DUF5133 PF17196.4 ORF23006 - 0.14 12.4 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF5133) Glucos_trans_II PF14264.6 ORF22158 - 0.023 14.1 2.0 0.027 13.9 2.0 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII SIT PF15330.6 ORF22158 - 0.061 13.8 0.7 0.59 10.6 0.2 2.0 1 1 1 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT Sec62 PF03839.16 ORF21914 - 6.7 6.1 6.4 9.8 5.6 6.4 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 Cyclase PF04199.13 ORF21521 - 0.17 12.2 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Putative cyclase Fijivirus_P9-2 PF06837.11 ORF21410 - 1.4 8.3 6.5 1.8 8.0 6.5 1.2 1 0 0 1 1 1 0 Fijivirus P9-2 protein NPIP PF06409.11 ORF18746 - 0.12 11.4 0.2 0.16 11.0 0.2 1.1 1 0 0 1 1 1 0 Nuclear pore complex interacting protein (NPIP) Shal-type PF11601.8 ORF16230 - 0.13 11.8 0.2 0.26 10.8 0.2 1.5 1 0 0 1 1 1 0 Shal-type voltage-gated potassium channels, N-terminal adh_short_C2 PF13561.6 ORF16208 - 9.1e-17 61.4 0.2 3.3e-10 39.9 0.1 2.0 1 1 1 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF16208 - 0.011 15.3 0.0 0.019 14.5 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase Arm_2 PF04826.13 ORF16185 - 0.043 13.3 0.0 0.05 13.1 0.0 1.1 1 0 0 1 1 1 0 Armadillo-like Melibiase_2 PF16499.5 ORF16185 - 0.075 12.2 0.0 0.081 12.1 0.0 1.1 1 0 0 1 1 1 0 Alpha galactosidase A PgaD PF13994.6 ORF15794 - 0.054 13.5 0.0 0.065 13.3 0.0 1.1 1 0 0 1 1 1 0 PgaD-like protein RCC1_2 PF13540.6 ORF15363 - 1.3e-09 37.6 1.0 3.1e-09 36.4 1.0 1.7 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat CDC24_OB3 PF17244.2 ORF15363 - 0.098 12.4 3.1 0.11 12.2 3.1 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 CxC5 PF18718.1 ORF15270 - 0.078 13.1 0.1 5.4 7.1 0.0 2.1 1 1 0 2 2 2 0 CxC5 like cysteine cluster associated with KDZ transposases CReP_N PF10472.9 ORF152046 - 0.018 14.0 0.0 0.021 13.7 0.0 1.0 1 0 0 1 1 1 0 eIF2-alpha phosphatase phosphorylation constitutive repressor Fmp27 PF10344.9 ORF152046 - 0.053 11.6 0.0 0.059 11.5 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial protein from FMP27 XRCC1_N PF01834.16 ORF151798 - 0.0022 18.0 0.0 0.0028 17.7 0.0 1.2 1 0 0 1 1 1 1 XRCC1 N terminal domain F5_F8_type_C PF00754.25 ORF151798 - 0.0058 16.8 0.0 0.0063 16.6 0.0 1.2 1 1 0 1 1 1 1 F5/8 type C domain DUF5062 PF16691.5 ORF151709 - 0.043 14.0 0.0 0.059 13.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5062) Glu-tRNAGln PF02686.15 ORF151709 - 0.22 11.8 0.1 0.22 11.8 0.1 2.0 2 0 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit M16C_assoc PF08367.11 ORF151709 - 1.6 7.8 6.9 62 2.6 7.9 2.0 2 0 0 2 2 2 0 Peptidase M16C associated Pkinase PF00069.25 ORF15066 - 3.8e-33 115.0 1.1 4.3e-33 114.8 1.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF15066 - 5.5e-19 68.5 0.2 6.2e-19 68.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF15066 - 0.0009 18.3 0.2 0.00099 18.1 0.2 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF15066 - 0.048 13.3 0.1 0.053 13.1 0.1 1.2 1 0 0 1 1 1 0 RIO1 family DHH PF01368.20 ORF15066 - 0.085 13.1 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 DHH family APH PF01636.23 ORF15066 - 0.15 11.9 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family TssN PF17555.2 ORF1496 - 0.078 12.3 1.0 0.09 12.2 1.0 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN Arm PF00514.23 ORF149352 - 0.001 19.1 2.4 0.0065 16.5 0.1 2.7 2 1 0 3 3 3 1 Armadillo/beta-catenin-like repeat DUF3636 PF12331.8 ORF149352 - 0.026 14.4 0.4 0.049 13.5 0.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3636) Ion_trans PF00520.31 ORF149153 - 2.3e-09 36.9 5.5 2.7e-09 36.6 5.5 1.1 1 0 0 1 1 1 1 Ion transport protein Transposase_22 PF02994.14 ORF144897 - 0.54 10.5 5.0 0.19 11.9 1.9 1.8 2 1 0 2 2 2 0 L1 transposable element RBD-like domain SIR2 PF02146.17 ORF144897 - 0.72 9.8 6.7 0.58 10.1 2.3 2.0 1 1 1 2 2 2 0 Sir2 family zf-CCCH PF00642.24 ORF143667 - 0.18 11.8 0.1 0.18 11.8 0.1 2.2 3 0 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) ATC_hydrolase PF14196.6 ORF143624 - 0.079 13.7 0.0 0.43 11.4 0.0 2.0 2 0 0 2 2 2 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase Augurin PF15187.6 ORF143190 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF143190 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin Phage_holin_2_3 PF16080.5 ORF143182 - 0.021 14.6 0.4 0.05 13.4 0.0 1.9 2 0 0 2 2 2 0 Bacteriophage holin family HP1 DUF4329 PF14220.6 ORF142131 - 0.069 13.2 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4329) Sec62 PF03839.16 ORF141880 - 6.7 6.1 6.4 9.8 5.6 6.4 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 FerA PF08165.11 ORF140360 - 0.15 12.1 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 FerA (NUC095) domain NB PF04159.13 ORF13967 - 0.5 10.4 2.6 0.49 10.5 1.1 1.8 2 0 0 2 2 2 0 NB glycoprotein TPR_1 PF00515.28 ORF138949 - 7e-07 28.8 2.0 7.9e-06 25.5 1.6 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF138949 - 2.1e-06 27.4 0.4 3.1e-05 23.7 1.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF138949 - 0.00052 20.0 1.4 0.0018 18.4 0.9 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF357 PF04010.13 ORF138949 - 0.001 19.1 0.3 0.0021 18.1 0.3 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF357) TPR_17 PF13431.6 ORF138949 - 0.012 15.9 0.6 0.027 14.8 0.1 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF138949 - 0.057 13.5 0.0 12 6.2 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks210.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks210.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks210.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks210.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:11:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TP_methylase PF00590.20 ORF138893 - 0.28 11.1 0.0 0.29 11.0 0.0 1.1 1 0 0 1 1 1 0 Tetrapyrrole (Corrin/Porphyrin) Methylases BLOC1S3 PF15753.5 ORF137874 - 2.6 8.1 9.3 1.6 8.8 1.2 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 DUF4618 PF15397.6 ORF136639 - 0.0082 15.6 3.6 0.009 15.5 3.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) DUF4349 PF14257.6 ORF136639 - 0.022 14.2 3.2 0.026 14.0 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) bZIP_Maf PF03131.17 ORF136639 - 0.031 14.8 1.4 0.031 14.8 1.4 1.7 2 0 0 2 2 2 0 bZIP Maf transcription factor DUF4472 PF14739.6 ORF136639 - 0.035 14.9 5.4 0.045 14.5 5.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4472) CENP-F_leu_zip PF10473.9 ORF136639 - 0.062 13.3 7.7 0.098 12.7 7.6 1.6 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.11 ORF136639 - 0.073 11.9 6.1 0.091 11.6 6.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DivIC PF04977.15 ORF136639 - 0.076 12.8 5.1 0.05 13.4 1.4 2.3 1 1 1 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF136639 - 0.084 13.1 7.1 0.076 13.3 5.0 1.9 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain CENP-H PF05837.12 ORF136639 - 0.26 11.7 6.9 0.39 11.2 6.7 1.5 1 1 0 1 1 1 0 Centromere protein H (CENP-H) APG6_N PF17675.1 ORF136639 - 0.29 11.6 11.3 0.51 10.9 11.3 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region Bap31_Bap29_C PF18035.1 ORF136639 - 1.4 9.0 8.2 0.85 9.7 5.3 2.2 2 1 1 3 3 3 0 Bap31/Bap29 cytoplasmic coiled-coil domain DUF4547 PF15080.6 ORF136468 - 0.034 13.8 0.8 0.041 13.5 0.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4547) EamA PF00892.20 ORF134162 - 4.8e-09 36.5 6.7 6e-09 36.2 6.7 1.1 1 0 0 1 1 1 1 EamA-like transporter family DUF2231 PF09990.9 ORF134162 - 0.017 15.5 2.2 0.025 15.0 1.5 1.6 2 1 0 2 2 2 0 Predicted membrane protein (DUF2231) SLATT_6 PF18169.1 ORF134162 - 0.1 12.2 0.4 0.1 12.2 0.4 1.9 1 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 DUF4118 PF13493.6 ORF134162 - 0.48 10.2 7.2 0.13 12.1 0.6 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4118) MSA-2c PF12238.8 ORF13079 - 0.028 14.5 0.4 0.033 14.2 0.4 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c RRN9 PF10680.9 ORF130153 - 0.078 13.3 0.1 0.078 13.3 0.1 2.1 2 0 0 2 2 2 0 RNA polymerase I specific transcription initiation factor DUF4538 PF15061.6 ORF129483 - 4.7 7.0 5.2 3.2 7.5 0.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4538) UCH PF00443.29 ORF129250 - 1e-30 107.1 0.3 1.2e-30 106.9 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF129250 - 5.9e-05 22.8 0.0 7.4e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase CW_binding_1 PF01473.20 ORF129250 - 0.065 13.6 4.0 0.18 12.2 4.0 1.8 1 0 0 1 1 1 0 Putative cell wall binding repeat ABA_WDS PF02496.16 ORF129051 - 0.087 13.3 1.5 0.087 13.3 1.5 2.4 1 1 0 2 2 2 0 ABA/WDS induced protein Tower PF09121.10 ORF129051 - 5.2 7.4 7.7 1.2 9.3 0.2 2.9 3 1 0 3 3 3 0 Tower TEX33 PF15400.6 ORF126959 - 0.15 12.6 0.0 0.17 12.4 0.0 1.1 1 0 0 1 1 1 0 Testis-expressed sequence 33 protein family adh_short_C2 PF13561.6 ORF12679 - 9.1e-17 61.4 0.2 3.3e-10 39.9 0.1 2.0 1 1 1 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF12679 - 0.011 15.3 0.0 0.019 14.5 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase Ank_4 PF13637.6 ORF12576 - 7.8e-09 35.9 0.1 3.5e-08 33.8 0.0 1.9 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF12576 - 1.6e-08 34.1 0.1 0.015 15.8 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF12576 - 2.9e-08 33.8 0.2 0.00017 21.8 0.0 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF12576 - 1.5e-07 31.9 0.0 2.1e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF12576 - 9.1e-06 25.9 0.0 0.18 12.3 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat AvrPtoB_bdg PF16847.5 ORF12576 - 0.098 13.2 0.1 1.1 9.8 0.0 2.1 1 1 0 2 2 2 0 Avirulence AvrPtoB, BAK1-binding domain EF-hand_7 PF13499.6 ORF125382 - 3.1e-11 43.6 0.4 0.00018 21.9 0.1 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF125382 - 1.5e-10 39.8 2.0 0.00026 20.3 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF125382 - 1.3e-08 34.0 2.6 0.00043 19.7 0.5 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF125382 - 2.3e-08 33.3 0.8 0.0027 17.5 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF125382 - 7.3e-07 28.9 0.2 0.0026 17.6 0.1 2.4 2 0 0 2 2 2 2 EF-hand domain pair DUF1654 PF07867.11 ORF125382 - 0.048 13.4 0.1 0.088 12.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1654) SPARC_Ca_bdg PF10591.9 ORF125382 - 0.051 13.9 0.1 1.8 8.9 0.0 2.1 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Homeobox_KN PF05920.11 ORF125102 - 1e-17 63.7 0.4 2.2e-17 62.7 0.4 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF125102 - 2.5e-10 40.1 1.1 4.1e-10 39.3 1.1 1.5 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF125102 - 0.0031 17.3 0.1 0.0085 15.9 0.0 1.8 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Ank_5 PF13857.6 ORF125006 - 2.9e-12 46.6 1.4 2e-05 24.8 0.2 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF125006 - 3.9e-10 40.2 0.2 0.00077 20.0 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF125006 - 2.2e-07 31.3 3.7 1.1e-05 25.9 0.6 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF125006 - 3.3e-07 30.1 0.4 0.0022 18.3 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF125006 - 6.8e-06 26.3 1.9 0.052 14.0 0.2 3.2 3 0 0 3 3 3 2 Ankyrin repeat DUF1187 PF06688.11 ORF125006 - 0.014 15.7 0.0 3.5 8.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1187) YdjO PF14169.6 ORF124272 - 0.057 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Cold-inducible protein YdjO Presenilin PF01080.17 ORF123761 - 0.009 14.8 1.8 0.0078 15.0 1.8 1.2 1 0 0 1 1 1 1 Presenilin Neur_chan_memb PF02932.16 ORF123761 - 0.35 10.9 2.9 0.32 11.0 2.9 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Suf PF05843.14 ORF123761 - 0.77 9.7 10.6 0.77 9.7 10.6 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) eIF-3_zeta PF05091.12 ORF123761 - 1.1 8.1 12.3 1.2 8.0 12.3 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Spt20 PF12090.8 ORF123761 - 1.5 8.3 28.1 1.7 8.2 28.1 1.1 1 0 0 1 1 1 0 Spt20 family DUF4407 PF14362.6 ORF123761 - 2.2 7.6 7.7 2.3 7.5 7.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4834 PF16118.5 ORF123761 - 4.8 8.2 12.8 6.7 7.7 12.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) RabGAP-TBC PF00566.18 ORF12299 - 1.3 8.6 11.2 0.077 12.6 4.6 1.8 1 1 1 2 2 2 0 Rab-GTPase-TBC domain ATC_hydrolase PF14196.6 ORF122643 - 0.079 13.7 0.0 0.43 11.4 0.0 2.0 2 0 0 2 2 2 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase TRI5 PF06330.11 ORF12231 - 0.12 11.2 0.1 0.13 11.1 0.1 1.0 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) APC_basic PF05956.11 ORF119927 - 0.07 12.6 0.2 0.085 12.3 0.2 1.1 1 0 0 1 1 1 0 APC basic domain SPRR2 PF14820.6 ORF119927 - 0.43 10.7 4.4 28 4.9 3.2 2.3 2 0 0 2 2 2 0 Small proline-rich 2 Augurin PF15187.6 ORF119553 - 0.025 14.8 0.2 0.047 13.9 0.2 1.5 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 Colicin-DNase PF12639.7 ORF119553 - 0.034 15.0 0.1 0.049 14.5 0.1 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin zinc_ribbon_10 PF10058.9 ORF118665 - 0.1 12.4 1.8 0.21 11.3 1.4 1.8 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein CENP-F_leu_zip PF10473.9 ORF117564 - 0.0021 18.1 13.7 0.0028 17.7 13.7 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HSP70 PF00012.20 ORF117564 - 0.0077 14.5 12.1 0.01 14.1 12.1 1.2 1 0 0 1 1 1 1 Hsp70 protein DUF3552 PF12072.8 ORF117564 - 0.02 14.3 17.1 0.025 14.0 17.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TMF_DNA_bd PF12329.8 ORF117564 - 0.032 14.2 24.6 0.23 11.5 14.4 2.7 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding COMP PF11598.8 ORF117564 - 0.066 13.7 4.5 1.4 9.5 0.0 3.1 3 0 0 3 3 3 0 Cartilage oligomeric matrix protein FliD_C PF07195.12 ORF117564 - 0.072 12.5 10.9 0.051 13.0 8.4 1.8 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Nup88 PF10168.9 ORF117564 - 0.081 10.7 13.4 0.095 10.5 13.4 1.0 1 0 0 1 1 1 0 Nuclear pore component End3 PF12761.7 ORF117564 - 0.14 12.3 16.1 0.039 14.1 9.8 2.0 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 DUF4407 PF14362.6 ORF117564 - 0.19 11.0 7.4 0.25 10.7 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CHASE6_C PF17150.4 ORF117564 - 0.2 12.3 7.9 0.81 10.4 2.3 2.3 1 1 1 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain BLOC1_2 PF10046.9 ORF117564 - 0.26 11.6 17.7 0.42 10.9 11.9 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF3450 PF11932.8 ORF117564 - 0.28 10.5 12.9 0.69 9.2 12.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 ORF117564 - 0.28 10.7 8.6 0.34 10.4 8.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Atg14 PF10186.9 ORF117564 - 0.33 10.0 13.3 0.38 9.8 13.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 MMPL PF03176.15 ORF117564 - 0.39 9.6 1.3 0.46 9.4 1.3 1.1 1 0 0 1 1 1 0 MMPL family Tropomyosin_1 PF12718.7 ORF117564 - 0.43 10.7 18.9 0.37 11.0 17.7 1.5 1 1 0 1 1 1 0 Tropomyosin like USP8_interact PF08941.10 ORF117564 - 0.47 10.2 9.5 2.9 7.7 5.8 2.1 1 1 1 2 2 2 0 USP8 interacting GBP_C PF02841.14 ORF117564 - 0.5 9.7 18.0 0.6 9.5 18.0 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF4795 PF16043.5 ORF117564 - 0.54 9.8 17.5 1.7 8.2 3.3 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Fib_alpha PF08702.10 ORF117564 - 0.57 10.4 16.5 9.2 6.4 13.6 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF117564 - 0.75 10.3 14.7 0.12 12.9 8.2 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 TMPIT PF07851.13 ORF117564 - 0.98 8.6 11.6 1.2 8.3 11.6 1.2 1 0 0 1 1 1 0 TMPIT-like protein Cut12 PF11500.8 ORF117564 - 1.1 9.1 15.1 1.3 8.9 3.8 2.2 1 1 1 2 2 2 0 Spindle pole body formation-associated protein ALMT PF11744.8 ORF117564 - 1.4 7.6 10.1 1.5 7.6 10.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF2203 PF09969.9 ORF117564 - 1.6 9.5 11.5 4.4 8.0 9.5 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) APG6_N PF17675.1 ORF117564 - 1.6 9.2 15.1 2.3 8.8 15.1 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region FAM76 PF16046.5 ORF117564 - 1.8 7.9 17.3 2.7 7.3 17.3 1.3 1 1 0 1 1 1 0 FAM76 protein DUF641 PF04859.12 ORF117564 - 1.9 8.8 14.3 1 9.7 7.6 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) CPSase_L_D3 PF02787.19 ORF117564 - 2 8.8 8.0 6.4 7.1 8.0 1.8 1 1 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Erf4 PF10256.9 ORF117564 - 2.7 8.1 6.1 15 5.7 0.5 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 7/ERF4 family DUF1664 PF07889.12 ORF117564 - 3.1 7.8 10.8 4.3 7.4 8.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF724 PF05266.14 ORF117564 - 4.1 7.2 15.1 6 6.6 15.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Med4 PF10018.9 ORF117564 - 4.6 6.9 14.3 9.2 5.9 14.4 1.5 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF4094 PF13334.6 ORF117564 - 5.2 7.6 9.2 0.86 10.1 4.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) CREPT PF16566.5 ORF117564 - 5.6 7.1 13.8 10 6.3 13.4 1.4 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour Fzo_mitofusin PF04799.13 ORF117564 - 5.8 6.4 10.5 10 5.6 6.3 2.2 1 1 1 2 2 2 0 fzo-like conserved region zf-CCCH PF00642.24 ORF116141 - 0.18 11.8 0.1 0.18 11.8 0.1 2.2 3 0 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) DUF1296 PF06972.11 ORF11514 - 0.0018 18.4 1.3 0.0025 17.9 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1296) DUF1479 PF07350.12 ORF11514 - 0.013 14.3 0.1 0.019 13.8 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1479) Fib_alpha PF08702.10 ORF11514 - 0.041 14.1 0.5 0.049 13.8 0.5 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family SAPIS-gp6 PF16722.5 ORF11514 - 0.25 11.8 4.8 0.43 11.0 1.2 2.2 1 1 1 2 2 2 0 Pathogenicity island protein gp6 in Staphylococcus DUF4199 PF13858.6 ORF114016 - 0.09 13.2 5.5 0.12 12.8 5.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) TetR_C_14 PF17754.1 ORF111909 - 0.031 14.2 0.0 0.058 13.3 0.0 1.4 1 0 0 1 1 1 0 MftR C-terminal domain DUF1358 PF07096.11 ORF109804 - 0.066 13.2 0.0 0.091 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) DUF5004 PF16395.5 ORF109303 - 0.04 13.9 0.0 0.056 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5004) DUF525 PF04379.14 ORF109160 - 1.5e-33 114.9 0.0 1.8e-33 114.6 0.0 1.1 1 0 0 1 1 1 1 ApaG domain DUF4354 PF14263.6 ORF109160 - 0.068 13.0 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) DUF1499 PF07386.11 ORF108460 - 1.8e-12 47.8 0.0 3.8e-12 46.8 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1499) BatD PF13584.6 ORF108373 - 0.011 14.6 0.1 0.13 11.1 0.1 1.9 1 1 0 1 1 1 0 Oxygen tolerance Imm17 PF15562.6 ORF108373 - 0.013 15.4 0.0 0.013 15.4 0.0 1.7 2 0 0 2 2 2 0 Immunity protein 17 Otopetrin PF03189.13 ORF108373 - 0.041 12.7 0.1 0.047 12.5 0.1 1.2 1 0 0 1 1 1 0 Otopetrin Connexin PF00029.19 ORF108373 - 0.13 12.0 2.1 0.78 9.5 0.2 2.0 1 1 1 2 2 2 0 Connexin DUF443 PF04276.12 ORF108373 - 0.21 11.4 4.3 0.06 13.2 1.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF443) Srg PF02118.21 ORF108373 - 0.22 11.1 7.3 0.3 10.7 7.3 1.1 1 0 0 1 1 1 0 Srg family chemoreceptor FAM176 PF14851.6 ORF108373 - 0.23 11.1 2.2 0.52 10.0 1.3 1.8 2 0 0 2 2 2 0 FAM176 family Orf78 PF06024.12 ORF108373 - 2.2 8.6 8.0 0.089 13.1 0.7 2.1 2 1 0 2 2 2 0 Orf78 (ac78) ETRAMP PF09716.10 ORF108373 - 2.4 8.3 7.8 15 5.8 7.8 2.2 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Ac76 PF05814.11 ORF108373 - 2.4 8.2 6.9 0.13 12.3 1.1 1.8 2 0 0 2 2 2 0 Orf76 (Ac76) EphA2_TM PF14575.6 ORF107689 - 0.19 12.6 1.0 0.37 11.7 1.0 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain O-antigen_lig PF13425.6 ORF107689 - 0.21 10.3 2.3 0.24 10.2 2.3 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Peptidase_M50B PF13398.6 ORF106533 - 1.1 8.9 8.9 1.6 8.3 9.0 1.2 1 1 0 1 1 1 0 Peptidase M50B-like DUF459 PF04311.13 ORF106498 - 0.045 12.7 0.2 0.053 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF459) DUF4217 PF13959.6 ORF106189 - 0.12 12.7 1.0 2.8 8.2 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4217) Epimerase_2 PF02350.19 ORF105651 - 7.5e-36 123.7 0.0 8.4e-36 123.5 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase Glycos_transf_1 PF00534.20 ORF105651 - 0.0026 17.3 0.0 0.004 16.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF105651 - 0.084 13.3 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF448 PF04296.13 ORF105306 - 0.12 12.3 0.0 0.19 11.6 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF448) DNA_RNApol_7kD PF03604.13 ORF104186 - 0.0014 18.2 0.8 0.0014 18.2 0.8 2.0 2 1 0 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.7 ORF104186 - 0.0043 17.0 5.1 0.0096 15.9 5.2 1.6 1 1 0 1 1 1 1 Double zinc ribbon zinc-ribbons_6 PF07191.12 ORF104186 - 0.096 12.7 1.2 0.096 12.7 1.2 2.3 2 1 1 3 3 3 0 zinc-ribbons zf-ACC PF17848.1 ORF104186 - 0.45 10.6 0.1 0.45 10.6 0.1 3.0 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain Prok-RING_1 PF14446.6 ORF104186 - 4.3 7.4 8.8 0.5 10.3 0.3 2.6 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 RseC_MucC PF04246.12 ORF103815 - 0.084 12.8 0.6 0.084 12.8 0.6 1.6 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DPM3 PF08285.11 ORF102787 - 0.041 14.1 0.5 0.059 13.6 0.5 1.3 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) zf-ACC PF17848.1 ORF102302 - 0.13 12.4 0.1 0.24 11.5 0.1 1.5 1 0 0 1 1 1 0 Acetyl-coA carboxylase zinc finger domain DUF4337 PF14235.6 ORF101803 - 0.036 14.2 0.4 0.043 13.9 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Eaf7 PF07904.13 ORF101803 - 0.054 13.9 0.8 0.085 13.2 0.8 1.5 1 1 0 1 1 1 0 Chromatin modification-related protein EAF7 DASH_Ask1 PF08655.10 ORF101521 - 0.11 12.4 0.1 0.25 11.3 0.1 1.6 1 1 0 1 1 1 0 DASH complex subunit Ask1 SnoaL_2 PF12680.7 ORF101381 - 0.088 13.5 0.3 0.15 12.7 0.3 1.3 1 0 0 1 1 1 0 SnoaL-like domain Med14 PF08638.11 ORF100753 - 0.015 14.7 0.6 0.017 14.6 0.6 1.1 1 0 0 1 1 1 0 Mediator complex subunit MED14 ATC_hydrolase PF14196.6 ORF100246 - 0.079 13.7 0.0 0.43 11.4 0.0 2.0 2 0 0 2 2 2 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase Herpes_UL37_1 PF03970.13 NODE_50044_length_370_cov_1.635821_g42150_i0reverse_frame_1 - 0.21 10.8 0.7 0.23 10.6 0.7 1.1 1 0 0 1 1 1 0 Herpesvirus UL37 tegument protein DUF4748 PF15932.5 NODE_50040_length_370_cov_2.038806_g42146_i0forward_frame_1 - 0.047 13.5 1.3 0.091 12.5 1.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) DUF842 PF05811.13 NODE_50032_length_370_cov_2.295522_g42138_i0reverse_frame_1 - 0.2 11.3 10.8 0.28 10.9 10.8 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) Ezh2_MCSS PF18600.1 NODE_50027_length_370_cov_2.537313_g42133_i0forward_frame_1 - 0.0097 15.5 0.4 0.018 14.7 0.4 1.4 1 0 0 1 1 1 1 MCSS domain SAND PF01342.21 NODE_50027_length_370_cov_2.537313_g42133_i0forward_frame_1 - 0.095 12.4 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 SAND domain PspC PF04024.12 NODE_50027_length_370_cov_2.537313_g42133_i0forward_frame_1 - 0.76 9.6 4.8 1.2 9.0 4.8 1.3 1 0 0 1 1 1 0 PspC domain Chromosome_seg PF13889.6 NODE_50017_length_370_cov_3.295522_g42123_i0forward_frame_1 - 0.19 11.9 9.0 0.73 10.0 3.5 2.2 2 0 0 2 2 2 0 Chromosome segregation during meiosis Oxygenase-NA PF09859.9 NODE_50016_length_370_cov_3.355224_g42122_i0reverse_frame_1 - 0.036 13.6 0.0 0.11 12.0 0.0 1.7 2 0 0 2 2 2 0 Oxygenase, catalysing oxidative methylation of damaged DNA Toxin_37 PF11415.8 NODE_50013_length_370_cov_3.588060_g42119_i0reverse_frame_1 - 0.089 12.6 0.4 0.17 11.8 0.4 1.5 1 0 0 1 1 1 0 Antifungal peptide termicin Plant_NMP1 PF06694.11 NODE_50013_length_370_cov_3.588060_g42119_i0reverse_frame_1 - 0.22 10.6 0.0 0.29 10.2 0.0 1.1 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) Aminotran_1_2 PF00155.21 NODE_50013_length_370_cov_3.588060_g42119_i0forward_frame_1 - 1.9e-13 50.3 0.0 2.2e-13 50.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II RGM_C PF06534.13 NODE_50013_length_370_cov_3.588060_g42119_i0forward_frame_1 - 0.11 12.0 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Repulsive guidance molecule (RGM) C-terminus zf-rbx1 PF12678.7 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 4.6e-06 26.8 1.6 4.6e-06 26.8 1.6 2.1 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 1.6e-05 25.1 2.2 1.6e-05 25.1 2.2 2.3 2 1 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 2.1e-05 24.3 1.6 2.1e-05 24.3 1.6 2.2 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 3.2e-05 23.8 2.1 3.2e-05 23.8 2.1 2.6 2 1 0 2 2 2 1 zinc-RING finger domain zf-RING_11 PF17123.5 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 0.0008 19.1 0.4 0.0008 19.1 0.4 3.1 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 0.0011 18.7 2.0 0.0011 18.7 2.0 2.4 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 0.0041 17.1 0.9 0.0041 17.1 0.9 2.9 2 1 1 3 3 3 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 0.0053 16.8 0.5 0.011 15.8 0.5 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 0.024 14.5 1.1 0.024 14.5 1.1 2.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 4 zf-RING_6 PF14835.6 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 0.025 14.4 4.9 0.17 11.7 0.4 2.2 2 0 0 2 2 2 0 zf-RING of BARD1-type protein zf-Nse PF11789.8 NODE_50000_length_370_cov_62.865672_g42106_i0reverse_frame_1 - 0.027 14.3 1.8 0.056 13.3 1.8 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit MitMem_reg PF13012.6 NODE_49998_length_370_cov_70.591045_g42104_i0reverse_frame_1 - 0.15 12.5 0.1 0.19 12.2 0.1 1.2 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function CRIC_ras_sig PF10534.9 NODE_49995_length_370_cov_76.701493_g42101_i0reverse_frame_1 - 9.5e-05 22.5 3.1 0.095 12.9 0.1 2.9 2 1 0 3 3 3 2 Connector enhancer of kinase suppressor of ras LCD1 PF09798.9 NODE_49995_length_370_cov_76.701493_g42101_i0reverse_frame_1 - 0.0018 16.9 0.1 0.0019 16.8 0.1 1.1 1 0 0 1 1 1 1 DNA damage checkpoint protein HATPase_c PF02518.26 NODE_49991_length_370_cov_92.611940_g42097_i0forward_frame_1 - 2.8e-05 24.6 0.0 4.5e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF5527 PF17665.1 NODE_49981_length_370_cov_154.710448_g42087_i0forward_frame_1 - 0.0046 16.5 0.0 0.0065 16.0 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5527) zf-B_box PF00643.24 NODE_49963_length_371_cov_1.565476_g42069_i0reverse_frame_1 - 1.9e-09 37.5 8.0 1.9e-09 37.5 8.0 1.7 2 0 0 2 2 2 1 B-box zinc finger zf-RAG1 PF10426.9 NODE_49954_length_371_cov_2.166667_g42060_i0reverse_frame_1 - 3.7 7.8 8.1 1.2 9.4 1.4 2.2 2 0 0 2 2 2 0 Recombination-activating protein 1 zinc-finger domain Arv1 PF04161.13 NODE_49954_length_371_cov_2.166667_g42060_i0forward_frame_1 - 0.0066 16.6 0.9 0.0066 16.6 0.9 1.4 1 1 0 1 1 1 1 Arv1-like family Mfp-3 PF04202.13 NODE_49952_length_371_cov_2.261905_g42058_i0reverse_frame_1 - 0.84 10.1 2.6 1.5 9.3 2.6 1.3 1 0 0 1 1 1 0 Foot protein 3 Toxin_9 PF02819.15 NODE_49951_length_371_cov_2.363095_g36386_i1reverse_frame_1 - 0.032 14.5 3.6 0.032 14.5 3.6 2.9 3 0 0 3 3 3 0 Spider toxin Chlam_PMP PF02415.17 NODE_49950_length_371_cov_2.369048_g42057_i0forward_frame_1 - 0.00081 19.7 19.1 0.011 16.2 6.3 4.8 4 1 0 4 4 4 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat BPS PF08947.10 NODE_49943_length_371_cov_2.654762_g42050_i0forward_frame_1 - 0.26 11.1 0.3 0.26 11.1 0.3 1.7 2 0 0 2 2 2 0 BPS (Between PH and SH2) ECSCR PF15820.5 NODE_49933_length_371_cov_3.604167_g42040_i0forward_frame_1 - 0.25 11.2 2.3 2.3 8.1 0.0 2.1 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator TMIE PF16038.5 NODE_49928_length_371_cov_19.824405_g42035_i0reverse_frame_1 - 0.22 11.4 1.8 0.43 10.4 1.8 1.5 1 0 0 1 1 1 0 TMIE protein Arf PF00025.21 NODE_49927_length_371_cov_19.919643_g42034_i0reverse_frame_1 - 0.00017 21.1 0.0 0.00018 21.0 0.0 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family DUF349 PF03993.12 NODE_49926_length_371_cov_30.175595_g42033_i0reverse_frame_1 - 0.038 14.3 1.1 0.048 14.0 1.1 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF349) Histone_H2A_C PF16211.5 NODE_49921_length_371_cov_43.142857_g42028_i0reverse_frame_1 - 5.4 6.9 6.0 11 5.8 6.0 1.5 1 0 0 1 1 1 0 C-terminus of histone H2A Med3 PF11593.8 NODE_49921_length_371_cov_43.142857_g42028_i0forward_frame_1 - 8.6 5.4 6.0 9.4 5.3 6.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF5586 PF17824.1 NODE_49920_length_371_cov_45.187500_g42027_i0reverse_frame_1 - 0.089 11.9 0.6 0.096 11.8 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5586) RCC1_2 PF13540.6 NODE_49918_length_371_cov_53.235119_g42025_i0reverse_frame_1 - 0.00014 21.5 0.5 0.036 13.9 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Bys1 PF04681.12 NODE_49918_length_371_cov_53.235119_g42025_i0reverse_frame_1 - 0.038 13.9 0.7 0.047 13.6 0.7 1.2 1 0 0 1 1 1 0 Blastomyces yeast-phase-specific protein Atg8 PF02991.16 NODE_49913_length_371_cov_72.690476_g42020_i0forward_frame_1 - 4.3e-33 113.6 0.1 5.4e-33 113.3 0.1 1.1 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 NODE_49913_length_371_cov_72.690476_g42020_i0forward_frame_1 - 2.2e-05 24.8 0.0 2.7e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Tantalus PF15386.6 NODE_49913_length_371_cov_72.690476_g42020_i0forward_frame_1 - 0.23 11.6 0.1 0.23 11.6 0.1 2.2 2 0 0 2 2 2 0 Drosophila Tantalus-like Myotoxins PF00819.17 NODE_49909_length_371_cov_74.297619_g42016_i0reverse_frame_1 - 0.029 14.7 2.5 0.029 14.7 2.5 2.7 2 1 0 2 2 2 0 Myotoxin, crotamine Amidoligase_2 PF12224.8 NODE_49909_length_371_cov_74.297619_g42016_i0forward_frame_1 - 0.086 12.5 0.1 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 Putative amidoligase enzyme PIP49_N PF14875.6 NODE_49905_length_371_cov_78.014881_g42012_i0reverse_frame_1 - 0.0045 16.9 0.5 0.0058 16.5 0.5 1.1 1 0 0 1 1 1 1 N-term cysteine-rich ER, FAM69 PARG_cat PF05028.14 NODE_49905_length_371_cov_78.014881_g42012_i0reverse_frame_1 - 0.031 13.6 1.2 0.035 13.4 1.2 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) MSP7_C PF12948.7 NODE_49905_length_371_cov_78.014881_g42012_i0reverse_frame_1 - 0.061 14.0 5.7 0.24 12.0 5.6 1.8 1 1 0 1 1 1 0 MSP7-like protein C-terminal domain Thiol_cytolysin PF01289.19 NODE_49904_length_371_cov_78.589286_g42011_i0forward_frame_1 - 0.016 14.1 0.2 0.018 13.9 0.2 1.1 1 0 0 1 1 1 0 Thiol-activated cytolysin DUF1648 PF07853.11 NODE_49898_length_371_cov_103.613095_g42005_i0forward_frame_1 - 0.34 10.6 0.0 0.34 10.6 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1648) DUF2205 PF10224.9 NODE_49893_length_371_cov_159.309524_g42000_i0reverse_frame_1 - 5.9e-07 29.4 0.0 8.8e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Short coiled-coil protein CENP-H PF05837.12 NODE_49893_length_371_cov_159.309524_g42000_i0reverse_frame_1 - 0.017 15.5 0.1 0.026 14.9 0.1 1.3 1 0 0 1 1 1 0 Centromere protein H (CENP-H) YabA PF06156.13 NODE_49893_length_371_cov_159.309524_g42000_i0reverse_frame_1 - 0.039 14.6 0.0 0.048 14.3 0.0 1.2 1 0 0 1 1 1 0 Initiation control protein YabA B-block_TFIIIC PF04182.12 NODE_49890_length_371_cov_198.755952_g41997_i0reverse_frame_1 - 0.084 13.0 1.2 13 6.1 0.0 2.9 3 0 0 3 3 3 0 B-block binding subunit of TFIIIC Herpes_BLLF1 PF05109.13 NODE_49884_length_371_cov_308.931548_g41991_i0reverse_frame_1 - 0.063 11.3 57.1 0.41 8.6 57.1 1.8 1 1 0 1 1 1 0 Herpes virus major outer envelope glycoprotein (BLLF1) Big_3_5 PF16640.5 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_1 - 0.18 12.0 14.2 7.1 6.9 7.9 3.0 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 3) YadA_head PF05658.14 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_1 - 1.1 9.7 42.4 7.1 7.2 3.5 8.8 4 1 4 8 8 8 0 Head domain of trimeric autotransporter adhesin DEFB136 PF17333.2 NODE_49864_length_372_cov_2.023739_g41971_i0forward_frame_1 - 0.29 11.1 4.4 0.57 10.2 4.4 1.4 1 0 0 1 1 1 0 Beta defensin 136 DUF5543 PF17697.1 NODE_49861_length_372_cov_2.225519_g41968_i0forward_frame_1 - 0.058 13.7 0.9 0.076 13.3 0.9 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5543) DUF4156 PF13698.6 NODE_49845_length_372_cov_3.311573_g41952_i0reverse_frame_1 - 3e-32 110.8 0.1 3.6e-32 110.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4156) HCV_env PF01539.17 NODE_49845_length_372_cov_3.311573_g41952_i0forward_frame_1 - 0.019 14.6 0.5 0.028 14.1 0.4 1.2 1 1 0 1 1 1 0 Hepatitis C virus envelope glycoprotein E1 Ntox11 PF15521.6 NODE_49845_length_372_cov_3.311573_g41952_i0forward_frame_1 - 0.023 14.3 0.0 0.026 14.1 0.0 1.0 1 0 0 1 1 1 0 Novel toxin 11 Usp PF00582.26 NODE_49841_length_372_cov_4.551929_g41948_i0forward_frame_1 - 2.7e-07 31.2 0.1 4e-07 30.6 0.1 1.3 1 0 0 1 1 1 1 Universal stress protein family Aconitase_B_N PF11791.8 NODE_49840_length_372_cov_4.762611_g41947_i0reverse_frame_1 - 3e-19 69.6 0.0 4.1e-19 69.2 0.0 1.2 1 0 0 1 1 1 1 Aconitate B N-terminal domain zf-CCCH PF00642.24 NODE_49827_length_372_cov_76.691395_g41934_i0reverse_frame_1 - 0.023 14.6 2.2 0.023 14.6 2.2 2.9 3 0 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Glyco_transf_34 PF05637.12 NODE_49823_length_372_cov_84.068249_g41930_i0reverse_frame_1 - 9.3e-05 22.3 0.0 0.00013 21.7 0.0 1.1 1 0 0 1 1 1 1 galactosyl transferase GMA12/MNN10 family DUF4129 PF13559.6 NODE_49815_length_372_cov_153.504451_g41922_i0forward_frame_1 - 0.12 12.6 2.2 0.14 12.5 0.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4129) Pro_CA PF00484.19 NODE_49812_length_372_cov_173.127596_g41919_i0reverse_frame_1 - 0.068 13.5 0.2 0.087 13.1 0.2 1.1 1 0 0 1 1 1 0 Carbonic anhydrase RP854 PF17460.2 NODE_49807_length_372_cov_318.575668_g41914_i0forward_frame_1 - 0.83 9.4 2.0 1 9.1 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein RP854 QslA_E PF18226.1 NODE_49803_length_372_cov_1554.970326_g41911_i0reverse_frame_1 - 0.058 13.3 0.1 0.087 12.7 0.1 1.3 1 0 0 1 1 1 0 LasR-specific antiactivator QslA chain E NAD_synthase PF02540.17 NODE_49798_length_373_cov_0.946746_g41906_i0reverse_frame_3 - 0.00047 19.4 0.0 0.00055 19.1 0.0 1.1 1 0 0 1 1 1 1 NAD synthase NAD_synthase PF02540.17 NODE_49798_length_373_cov_0.946746_g41906_i0reverse_frame_2 - 6.5e-28 97.5 0.1 7.4e-28 97.3 0.1 1.0 1 0 0 1 1 1 1 NAD synthase NusG_II PF07009.11 NODE_49795_length_373_cov_1.520710_g41903_i0reverse_frame_2 - 0.051 13.8 0.6 0.13 12.4 0.1 1.8 2 0 0 2 2 2 0 NusG domain II Oxidored_q5_N PF01059.17 NODE_49791_length_373_cov_1.639053_g41899_i0reverse_frame_3 - 0.13 12.4 9.1 0.2 11.8 9.1 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus DNAP_B_exo_N PF08452.10 NODE_49789_length_373_cov_1.813609_g41897_i0reverse_frame_3 - 2.7 7.5 4.6 25 4.4 4.6 2.2 1 1 0 1 1 1 0 DNA polymerase family B exonuclease domain, N-terminal MS_channel PF00924.18 NODE_49788_length_373_cov_1.825444_g41896_i0reverse_frame_3 - 7.5e-12 45.2 6.6 1.4e-11 44.4 6.6 1.5 1 0 0 1 1 1 1 Mechanosensitive ion channel Spo7 PF03907.13 NODE_49788_length_373_cov_1.825444_g41896_i0reverse_frame_3 - 0.16 11.4 0.8 0.21 11.0 0.8 1.1 1 0 0 1 1 1 0 Spo7-like protein MatC_N PF07158.11 NODE_49788_length_373_cov_1.825444_g41896_i0reverse_frame_3 - 0.58 10.2 7.1 0.96 9.5 1.2 2.0 2 0 0 2 2 2 0 Dicarboxylate carrier protein MatC N-terminus dCMP_cyt_deam_1 PF00383.23 NODE_49788_length_373_cov_1.825444_g41896_i0forward_frame_3 - 0.13 12.2 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region RB_B PF01857.20 NODE_49788_length_373_cov_1.825444_g41896_i0forward_frame_3 - 0.17 11.9 1.7 0.52 10.4 0.1 2.0 1 1 1 2 2 2 0 Retinoblastoma-associated protein B domain ALG3 PF05208.13 NODE_49784_length_373_cov_1.920118_g41892_i0reverse_frame_3 - 0.15 11.5 1.6 0.17 11.3 1.6 1.0 1 0 0 1 1 1 0 ALG3 protein DUF5426 PF17473.2 NODE_49782_length_373_cov_2.005917_g41890_i0reverse_frame_2 - 0.73 10.1 5.7 0.24 11.7 2.8 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5426) IPPT PF01715.17 NODE_49782_length_373_cov_2.005917_g41890_i0forward_frame_2 - 0.047 13.5 0.1 0.051 13.4 0.1 1.1 1 0 0 1 1 1 0 IPP transferase PRD_Mga PF08270.11 NODE_49779_length_373_cov_2.094675_g41887_i0forward_frame_3 - 0.0063 16.2 2.0 0.0073 16.0 2.0 1.1 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) PRD domain MerR PF00376.23 NODE_49776_length_373_cov_2.301775_g41884_i0reverse_frame_2 - 0.054 13.3 0.0 0.13 12.1 0.0 1.6 1 1 0 1 1 1 0 MerR family regulatory protein MotB_plug PF13677.6 NODE_49775_length_373_cov_2.316568_g41883_i0forward_frame_2 - 0.16 11.6 0.1 0.33 10.6 0.0 1.5 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB DUF2070 PF09843.9 NODE_49772_length_373_cov_2.544379_g41880_i0forward_frame_3 - 0.2 9.9 3.6 0.22 9.8 3.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) MatE PF01554.18 NODE_49768_length_373_cov_3.065089_g41876_i0forward_frame_3 - 3.2e-20 72.4 0.2 3.2e-20 72.4 0.2 1.6 2 0 0 2 2 2 1 MatE Polysacc_synt_C PF14667.6 NODE_49768_length_373_cov_3.065089_g41876_i0forward_frame_3 - 3.1e-08 33.8 4.6 3.4e-08 33.7 1.8 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis C-terminal domain DUF4012 PF13196.6 NODE_49767_length_373_cov_3.100592_g41875_i0reverse_frame_2 - 0.00072 20.0 3.6 0.42 11.1 1.0 2.6 1 1 1 2 2 2 2 Protein of unknown function (DUF4012) IHHNV_capsid PF16530.5 NODE_49767_length_373_cov_3.100592_g41875_i0reverse_frame_2 - 0.097 11.8 2.1 0.11 11.6 2.1 1.1 1 0 0 1 1 1 0 Infectious hypodermal and haematopoietic necrosis virus, capsid YolD PF08863.10 NODE_49767_length_373_cov_3.100592_g41875_i0reverse_frame_2 - 0.15 12.2 1.8 9.4 6.4 0.0 2.7 1 1 2 3 3 3 0 YolD-like protein zf-CXXC PF02008.20 NODE_49766_length_373_cov_3.112426_g41874_i0reverse_frame_2 - 3.5 7.7 12.6 0.14 12.2 6.1 2.0 2 0 0 2 2 2 0 CXXC zinc finger domain YrzO PF14142.6 NODE_49763_length_373_cov_3.926036_g41871_i0reverse_frame_2 - 0.023 14.6 0.1 0.097 12.6 0.0 1.9 2 0 0 2 2 2 0 YrzO-like protein Borealin PF10512.9 NODE_49757_length_373_cov_13.434911_g41865_i0reverse_frame_3 - 0.19 11.7 0.6 0.25 11.3 0.6 1.2 1 0 0 1 1 1 0 Cell division cycle-associated protein 8 Vinculin PF01044.19 NODE_49757_length_373_cov_13.434911_g41865_i0reverse_frame_3 - 0.25 9.5 0.1 0.3 9.3 0.1 1.0 1 0 0 1 1 1 0 Vinculin family BPS PF08947.10 NODE_49751_length_373_cov_63.210059_g41859_i0reverse_frame_3 - 0.39 10.6 0.1 0.39 10.6 0.1 2.0 3 0 0 3 3 3 0 BPS (Between PH and SH2) OSTMP1 PF09777.9 NODE_49751_length_373_cov_63.210059_g41859_i0forward_frame_2 - 0.032 13.6 0.1 0.047 13.1 0.1 1.3 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor UCR_14kD PF02271.16 NODE_49750_length_373_cov_65.171598_g41858_i0reverse_frame_3 - 0.065 13.2 1.3 0.31 11.0 0.0 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase complex 14kD subunit Cupin_8 PF13621.6 NODE_49749_length_373_cov_65.991124_g41857_i0reverse_frame_3 - 5.2e-07 29.6 0.1 2.2e-06 27.6 0.1 1.9 1 1 0 1 1 1 1 Cupin-like domain Cupin_2 PF07883.11 NODE_49749_length_373_cov_65.991124_g41857_i0reverse_frame_3 - 0.00034 20.3 0.0 0.00058 19.5 0.0 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_4 PF08007.12 NODE_49749_length_373_cov_65.991124_g41857_i0reverse_frame_3 - 0.00096 18.7 0.0 0.0012 18.4 0.0 1.1 1 0 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 NODE_49749_length_373_cov_65.991124_g41857_i0reverse_frame_3 - 0.016 15.7 0.0 0.023 15.1 0.0 1.2 1 0 0 1 1 1 0 JmjC domain, hydroxylase Cupin_6 PF12852.7 NODE_49749_length_373_cov_65.991124_g41857_i0reverse_frame_3 - 0.018 14.7 0.0 0.02 14.6 0.0 1.2 1 0 0 1 1 1 0 Cupin AraC_binding PF02311.19 NODE_49749_length_373_cov_65.991124_g41857_i0reverse_frame_3 - 0.029 14.3 0.1 0.069 13.1 0.0 1.6 1 1 1 2 2 2 0 AraC-like ligand binding domain Cupin_3 PF05899.12 NODE_49749_length_373_cov_65.991124_g41857_i0reverse_frame_3 - 0.052 13.2 0.0 0.083 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) CLZ PF16526.5 NODE_49746_length_373_cov_68.494083_g41854_i0forward_frame_2 - 0.075 13.4 0.1 0.15 12.4 0.1 1.5 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels EF-hand_6 PF13405.6 NODE_49741_length_373_cov_74.890533_g41849_i0forward_frame_3 - 0.15 12.1 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain RdRP_1 PF00680.20 NODE_49741_length_373_cov_74.890533_g41849_i0forward_frame_2 - 0.017 13.6 0.1 0.02 13.4 0.1 1.0 1 0 0 1 1 1 0 RNA dependent RNA polymerase DAN PF03045.15 NODE_49739_length_373_cov_76.837278_g41847_i0reverse_frame_2 - 0.032 14.3 5.1 0.62 10.1 0.5 2.1 1 1 1 2 2 2 0 DAN domain PPR_3 PF13812.6 NODE_49736_length_373_cov_83.541420_g41844_i0reverse_frame_2 - 8.6e-11 41.8 0.0 8.3e-09 35.4 0.0 2.1 1 1 1 2 2 2 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_49736_length_373_cov_83.541420_g41844_i0reverse_frame_2 - 7.7e-10 38.8 0.0 1.6e-08 34.6 0.0 2.3 2 1 0 2 2 2 1 PPR repeat family PPR PF01535.20 NODE_49736_length_373_cov_83.541420_g41844_i0reverse_frame_2 - 1.1e-06 28.4 0.1 8.8e-06 25.6 0.0 2.4 3 0 0 3 3 3 1 PPR repeat PPR_1 PF12854.7 NODE_49736_length_373_cov_83.541420_g41844_i0reverse_frame_2 - 3.2e-06 26.7 0.0 8e-05 22.3 0.0 2.9 4 0 0 4 4 4 1 PPR repeat PPR_long PF17177.4 NODE_49736_length_373_cov_83.541420_g41844_i0reverse_frame_2 - 1.2e-05 24.8 0.0 1.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP COX5A PF02284.16 NODE_49736_length_373_cov_83.541420_g41844_i0reverse_frame_2 - 0.029 14.4 0.0 0.04 13.9 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Va Hce2 PF14856.6 NODE_49736_length_373_cov_83.541420_g41844_i0forward_frame_2 - 0.002 18.4 0.1 0.0028 17.9 0.1 1.2 1 0 0 1 1 1 1 Pathogen effector; putative necrosis-inducing factor Yeast-kill-tox PF09207.11 NODE_49735_length_373_cov_83.582840_g41843_i0forward_frame_3 - 0.045 14.4 1.1 0.083 13.5 1.1 1.4 1 0 0 1 1 1 0 Yeast killer toxin Mesd PF10185.9 NODE_49735_length_373_cov_83.582840_g41843_i0forward_frame_2 - 0.0014 18.6 0.0 0.0014 18.6 0.0 1.1 1 0 0 1 1 1 1 Chaperone for wingless signalling and trafficking of LDL receptor RHIM PF12721.7 NODE_49729_length_373_cov_92.730769_g41837_i0reverse_frame_3 - 0.053 14.0 0.0 0.1 13.1 0.0 1.5 1 0 0 1 1 1 0 RIP homotypic interaction motif Rpn3_C PF08375.11 NODE_49726_length_373_cov_112.488166_g41834_i0reverse_frame_2 - 0.26 11.7 0.0 0.38 11.2 0.0 1.2 1 0 0 1 1 1 0 Proteasome regulatory subunit C-terminal FGFR3_TM PF18123.1 NODE_49723_length_373_cov_114.292899_g41831_i0forward_frame_2 - 0.3 10.7 6.6 2.2 7.9 2.5 2.5 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain DUF2892 PF11127.8 NODE_49723_length_373_cov_114.292899_g41831_i0forward_frame_2 - 1.2 9.3 8.2 4.1 7.5 1.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2892) ST7 PF04184.12 NODE_49721_length_373_cov_131.230769_g41829_i0forward_frame_2 - 0.25 9.8 0.1 0.3 9.5 0.1 1.1 1 0 0 1 1 1 0 ST7 protein MDM31_MDM32 PF08118.11 NODE_49718_length_373_cov_197.967456_g41826_i0reverse_frame_3 - 0.01 14.5 0.2 0.013 14.2 0.2 1.0 1 0 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins zf-C2HCIx2C PF10782.9 NODE_49718_length_373_cov_197.967456_g41826_i0reverse_frame_2 - 0.012 15.5 0.5 0.026 14.4 0.5 1.6 1 0 0 1 1 1 0 Zinc-finger EF-hand_6 PF13405.6 NODE_49718_length_373_cov_197.967456_g41826_i0reverse_frame_2 - 0.15 12.1 0.7 0.25 11.4 0.1 1.7 2 0 0 2 2 2 0 EF-hand domain DUF805 PF05656.14 NODE_49717_length_373_cov_219.142012_g41825_i0reverse_frame_2 - 0.2 12.0 2.4 0.29 11.6 2.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF805) Baculo_11_kDa PF06143.11 NODE_49717_length_373_cov_219.142012_g41825_i0reverse_frame_2 - 0.63 9.7 3.3 4.4 6.9 0.0 2.3 2 1 0 2 2 2 0 Baculovirus 11 kDa family Disulph_isomer PF06491.11 NODE_49716_length_373_cov_290.668639_g41824_i0forward_frame_3 - 6.9 6.8 11.3 0.07 13.2 1.5 2.1 1 1 1 2 2 2 0 Disulphide isomerase CBP_BcsF PF11120.8 NODE_49707_length_374_cov_1.702065_g41816_i0reverse_frame_3 - 0.045 13.9 1.2 0.045 13.9 1.2 2.2 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsF CobU PF02283.16 NODE_49707_length_374_cov_1.702065_g41816_i0reverse_frame_2 - 6.7e-36 123.4 0.1 7.3e-36 123.3 0.1 1.0 1 0 0 1 1 1 1 Cobinamide kinase / cobinamide phosphate guanyltransferase POR_N PF01855.19 NODE_49703_length_374_cov_1.926254_g41812_i0forward_frame_2 - 3.8e-38 131.5 0.3 4.1e-38 131.4 0.3 1.0 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PA-IL PF07828.12 NODE_49703_length_374_cov_1.926254_g41812_i0forward_frame_2 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 PA-IL-like protein ATP-synt_8 PF00895.20 NODE_49701_length_374_cov_2.159292_g41810_i0reverse_frame_3 - 8.8 6.9 6.9 13 6.3 1.9 2.3 2 0 0 2 2 2 0 ATP synthase protein 8 Med25 PF11232.8 NODE_49698_length_374_cov_2.327434_g41807_i0reverse_frame_2 - 0.1 12.6 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 CDC45 PF02724.14 NODE_49698_length_374_cov_2.327434_g41807_i0reverse_frame_2 - 0.86 7.8 8.3 0.85 7.8 8.3 1.1 1 0 0 1 1 1 0 CDC45-like protein AAA_11 PF13086.6 NODE_49698_length_374_cov_2.327434_g41807_i0reverse_frame_2 - 6.9 6.4 9.4 8.7 6.0 9.4 1.2 1 0 0 1 1 1 0 AAA domain ATP-synt_Eps PF04627.13 NODE_49698_length_374_cov_2.327434_g41807_i0forward_frame_3 - 2.2 8.3 6.4 1.3 9.1 2.2 2.4 1 1 1 2 2 2 0 Mitochondrial ATP synthase epsilon chain Anoctamin PF04547.12 NODE_49696_length_374_cov_2.374631_g41805_i0forward_frame_2 - 2.8e-07 29.7 3.3 3.1e-07 29.6 3.3 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel MIG-14_Wnt-bd PF06664.12 NODE_49696_length_374_cov_2.374631_g41805_i0forward_frame_2 - 0.026 13.7 5.5 0.028 13.6 5.5 1.1 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion DUF2975 PF11188.8 NODE_49696_length_374_cov_2.374631_g41805_i0forward_frame_2 - 1.4 8.8 8.6 9.5 6.1 8.6 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2975) HNH_3 PF13392.6 NODE_49693_length_374_cov_2.469027_g41802_i0forward_frame_2 - 0.22 11.3 0.0 0.31 10.8 0.0 1.2 1 0 0 1 1 1 0 HNH endonuclease Spore_GerQ PF09671.10 NODE_49690_length_374_cov_2.693215_g41799_i0reverse_frame_2 - 0.00022 21.2 0.3 0.00047 20.1 0.3 1.6 1 1 0 1 1 1 1 Spore coat protein (Spore_GerQ) CoA_binding_3 PF13727.6 NODE_49690_length_374_cov_2.693215_g41799_i0forward_frame_3 - 0.061 13.3 0.9 0.068 13.2 0.9 1.2 1 0 0 1 1 1 0 CoA-binding domain AKAP2_C PF15304.6 NODE_49688_length_374_cov_2.849558_g41797_i0forward_frame_2 - 0.0043 16.4 0.0 0.0055 16.1 0.0 1.1 1 0 0 1 1 1 1 A-kinase anchor protein 2 C-terminus MtrE PF04206.12 NODE_49687_length_374_cov_3.147493_g41796_i0reverse_frame_3 - 0.035 13.4 0.0 0.044 13.1 0.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit E Conotoxin_I2 PF17557.2 NODE_49685_length_374_cov_3.427729_g41794_i0reverse_frame_3 - 0.061 13.4 2.1 0.13 12.4 2.1 1.5 1 0 0 1 1 1 0 I2-superfamily conotoxins mIF3 PF14877.6 NODE_49683_length_374_cov_4.823009_g41792_i0reverse_frame_3 - 0.031 13.9 0.2 0.036 13.7 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial translation initiation factor Ins_allergen_rp PF06757.13 NODE_49682_length_374_cov_6.899705_g41791_i0forward_frame_3 - 0.11 12.5 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Insect allergen related repeat, nitrile-specifier detoxification ITAM_Cys-rich PF10538.9 NODE_49680_length_374_cov_7.407080_g41789_i0reverse_frame_2 - 0.14 11.9 5.9 0.17 11.6 1.7 2.7 2 0 0 2 2 2 0 Immunoreceptor tyrosine-based activation motif Fib_alpha PF08702.10 NODE_49680_length_374_cov_7.407080_g41789_i0forward_frame_3 - 0.0044 17.2 2.7 0.0061 16.7 2.7 1.3 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family EzrA PF06160.12 NODE_49680_length_374_cov_7.407080_g41789_i0forward_frame_3 - 0.014 13.6 3.8 0.015 13.5 3.8 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA MapZ_EC1 PF18041.1 NODE_49680_length_374_cov_7.407080_g41789_i0forward_frame_3 - 0.056 13.7 3.2 0.078 13.2 3.2 1.3 1 1 0 1 1 1 0 MapZ extracellular domain 1 Dna2 PF08696.11 NODE_49677_length_374_cov_25.628319_g41786_i0forward_frame_3 - 0.66 9.7 7.8 1 9.2 7.7 1.3 1 1 0 1 1 1 0 DNA replication factor Dna2 DUF2151 PF10221.9 NODE_49677_length_374_cov_25.628319_g41786_i0forward_frame_2 - 0.71 8.4 6.2 0.79 8.2 6.2 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator Vac7 PF12751.7 NODE_49677_length_374_cov_25.628319_g41786_i0forward_frame_2 - 5.1 6.4 10.0 10 5.5 10.0 1.5 1 1 0 1 1 1 0 Vacuolar segregation subunit 7 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks211.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks211.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks211.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks211.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:09:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4834 PF16118.5 NODE_49674_length_374_cov_46.247788_g41783_i0forward_frame_2 - 3.4 8.7 7.4 2 9.4 5.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4407 PF14362.6 NODE_49672_length_374_cov_52.528024_g41781_i0reverse_frame_3 - 2.3 7.5 6.3 2.6 7.3 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) OmpH PF03938.14 NODE_49672_length_374_cov_52.528024_g41781_i0reverse_frame_3 - 6.4 7.1 15.3 0.3 11.4 6.4 2.1 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Vanabin-2 PF11437.8 NODE_49671_length_374_cov_54.740413_g41780_i0forward_frame_2 - 0.066 13.4 3.6 0.072 13.2 3.1 1.3 1 1 0 1 1 1 0 Vanadium-binding protein 2 SUR7 PF06687.12 NODE_49669_length_374_cov_59.542773_g41778_i0reverse_frame_2 - 9 5.9 14.2 8.3 6.0 11.9 1.8 1 1 1 2 2 2 0 SUR7/PalI family S19 PF06756.11 NODE_49664_length_374_cov_74.174041_g41773_i0reverse_frame_3 - 0.048 13.6 0.1 0.1 12.5 0.1 1.5 1 1 0 1 1 1 0 Chorion protein S19 C-terminal UL141 PF16758.5 NODE_49664_length_374_cov_74.174041_g41773_i0forward_frame_2 - 0.017 14.8 0.0 0.02 14.6 0.0 1.1 1 0 0 1 1 1 0 Herpes-like virus membrane glycoprotein UL141 Keratin_B2_2 PF13885.6 NODE_49663_length_374_cov_74.637168_g41772_i0reverse_frame_2 - 0.075 13.0 0.9 0.14 12.2 0.9 1.4 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein SPAM PF02090.15 NODE_49657_length_374_cov_81.879056_g41766_i0reverse_frame_3 - 0.0061 16.4 2.0 0.0061 16.4 2.0 2.3 1 1 1 2 2 2 1 Salmonella surface presentation of antigen gene type M protein Arnt_C PF18583.1 NODE_49657_length_374_cov_81.879056_g41766_i0reverse_frame_3 - 0.03 13.9 1.2 0.053 13.1 0.8 1.7 1 1 1 2 2 2 0 Aminoarabinose transferase C-terminal domain RNase_II_C_S1 PF18614.1 NODE_49655_length_374_cov_85.445428_g41764_i0reverse_frame_2 - 0.0011 18.9 0.1 0.0019 18.1 0.1 1.5 1 0 0 1 1 1 1 RNase II-type exonuclease C-terminal S1 domain NDUFA12 PF05071.16 NODE_49654_length_374_cov_86.439528_g41763_i0reverse_frame_3 - 0.041 14.7 0.7 0.054 14.3 0.7 1.4 1 1 0 1 1 1 0 NADH ubiquinone oxidoreductase subunit NDUFA12 DEAD_2 PF06733.15 NODE_49654_length_374_cov_86.439528_g41763_i0reverse_frame_2 - 0.16 11.6 3.2 0.19 11.3 3.2 1.1 1 0 0 1 1 1 0 DEAD_2 TetR_C_6 PF13977.6 NODE_49653_length_374_cov_89.507375_g41762_i0reverse_frame_2 - 0.034 14.3 3.4 0.18 12.0 0.1 2.1 1 1 1 2 2 2 0 BetI-type transcriptional repressor, C-terminal BRI3BP PF14965.6 NODE_49653_length_374_cov_89.507375_g41762_i0forward_frame_3 - 0.89 9.0 5.4 1.8 8.0 5.2 1.6 1 1 0 1 1 1 0 Negative regulator of p53/TP53 Pep1_7 PF17232.2 NODE_49652_length_374_cov_93.651917_g41761_i0reverse_frame_3 - 0.16 12.5 0.8 0.32 11.5 0.1 1.8 1 1 1 2 2 2 0 Elicitor peptide 1-7 TRM PF02005.16 NODE_49652_length_374_cov_93.651917_g41761_i0forward_frame_2 - 1.4e-07 31.1 0.1 1.9e-07 30.6 0.1 1.3 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Jak1_Phl PF17887.1 NODE_49652_length_374_cov_93.651917_g41761_i0forward_frame_2 - 0.045 13.7 0.9 0.054 13.5 0.9 1.3 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain Ribosomal_L29e PF01779.17 NODE_49650_length_374_cov_122.085546_g41759_i0reverse_frame_3 - 0.081 13.3 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 Ribosomal L29e protein family DUF4328 PF14219.6 NODE_49649_length_374_cov_127.097345_g41758_i0reverse_frame_3 - 0.1 12.2 0.9 1.3 8.5 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4328) DUF4224 PF13986.6 NODE_49649_length_374_cov_127.097345_g41758_i0forward_frame_2 - 0.03 14.2 0.4 0.092 12.7 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) DUF4407 PF14362.6 NODE_49644_length_374_cov_211.451327_g41753_i0reverse_frame_2 - 0.034 13.5 3.6 0.038 13.3 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TRPM_tetra PF16519.5 NODE_49644_length_374_cov_211.451327_g41753_i0reverse_frame_2 - 0.07 13.2 1.6 0.12 12.5 1.6 1.5 1 0 0 1 1 1 0 Tetramerisation domain of TRPM HMG_box PF00505.19 NODE_49639_length_374_cov_2099.672566_g41748_i0reverse_frame_3 - 8.6e-07 29.3 0.2 8.6e-07 29.3 0.2 1.5 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_49639_length_374_cov_2099.672566_g41748_i0reverse_frame_3 - 0.0001 22.8 0.1 0.00018 22.0 0.1 1.4 1 0 0 1 1 1 1 HMG-box domain Hemopexin PF00045.19 NODE_49636_length_374_cov_13794.519174_g41745_i0reverse_frame_2 - 0.031 14.2 0.0 0.046 13.7 0.0 1.3 1 0 0 1 1 1 0 Hemopexin COPI_C PF06957.11 NODE_49634_length_375_cov_1.320588_g41743_i0forward_frame_2 - 1.5e-08 33.9 0.0 1.7e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus SHR3_chaperone PF08229.11 NODE_49632_length_375_cov_1.435294_g41741_i0reverse_frame_2 - 0.009 15.0 0.9 0.011 14.8 0.9 1.1 1 0 0 1 1 1 1 ER membrane protein SH3 PIG-F PF06699.11 NODE_49632_length_375_cov_1.435294_g41741_i0forward_frame_3 - 8.7 6.5 9.3 10 6.2 9.3 1.1 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F DUF3385 PF11865.8 NODE_49632_length_375_cov_1.435294_g41741_i0forward_frame_2 - 0.078 12.9 3.2 0.11 12.4 0.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3385) DUF4049 PF13258.6 NODE_49631_length_375_cov_1.502941_g41740_i0forward_frame_3 - 3.4e-76 256.4 1.8 3.7e-76 256.3 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4049) Metallophos PF00149.28 NODE_49631_length_375_cov_1.502941_g41740_i0forward_frame_3 - 0.00049 20.7 0.1 0.00056 20.5 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Viral_Hsp90 PF03225.14 NODE_49631_length_375_cov_1.502941_g41740_i0forward_frame_3 - 0.031 12.8 0.1 0.038 12.5 0.1 1.0 1 0 0 1 1 1 0 Viral heat shock protein Hsp90 homologue Herpes_UL32 PF06070.11 NODE_49631_length_375_cov_1.502941_g41740_i0forward_frame_3 - 0.2 9.4 0.1 0.24 9.1 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 DUF2043 PF09740.9 NODE_49629_length_375_cov_1.523529_g41738_i0reverse_frame_3 - 0.088 13.5 0.2 0.13 13.0 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2043) Methyltransf_11 PF08241.12 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 1.7e-09 38.2 0.0 2.8e-09 37.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 1.7e-05 25.5 0.0 2.7e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 2.9e-05 23.5 0.0 0.00011 21.7 0.0 1.8 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 0.0029 17.4 0.0 0.0033 17.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Herpes_UL79 PF03049.14 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 0.0054 16.4 0.0 0.0058 16.3 0.0 1.1 1 0 0 1 1 1 1 UL79 family Methyltransf_31 PF13847.6 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 0.015 15.1 0.0 0.025 14.4 0.0 1.5 1 1 1 2 2 2 0 Methyltransferase domain Methyltransf_8 PF05148.15 NODE_49624_length_375_cov_1.779412_g41733_i0reverse_frame_3 - 0.026 14.4 0.0 0.041 13.7 0.0 1.4 1 1 0 1 1 1 0 Hypothetical methyltransferase SNAPc_SNAP43 PF09808.9 NODE_49623_length_375_cov_1.829412_g41732_i0reverse_frame_2 - 0.019 14.9 0.1 0.023 14.7 0.1 1.1 1 0 0 1 1 1 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 Sugar_tr PF00083.24 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 2e-30 106.0 5.7 2.2e-30 105.9 5.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 7.4e-18 64.6 6.4 8e-18 64.5 6.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_5 PF05631.14 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 0.0001 21.4 0.6 0.00014 20.9 0.5 1.4 1 1 1 2 2 2 1 Sugar-tranasporters, 12 TM TRI12 PF06609.13 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 0.00012 20.6 1.8 0.00014 20.4 1.8 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 0.00047 18.8 1.3 0.00057 18.6 1.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Phage_holin_3_2 PF04550.12 NODE_49620_length_375_cov_1.920588_g41729_i0forward_frame_3 - 0.0058 17.1 5.5 0.013 16.0 2.8 2.1 2 0 0 2 2 2 1 Phage holin family 2 zf-C2H2_jaz PF12171.8 NODE_49617_length_375_cov_2.058824_g41726_i0reverse_frame_2 - 0.06 13.7 1.3 0.068 13.5 0.1 1.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding MAP PF03642.13 NODE_49614_length_375_cov_2.282353_g41723_i0reverse_frame_2 - 0.0038 17.5 4.3 0.0041 17.4 2.6 1.8 2 0 0 2 2 2 1 MAP domain Retrotran_gag_3 PF14244.6 NODE_49612_length_375_cov_2.591176_g41721_i0reverse_frame_2 - 0.34 10.8 0.9 3.3 7.6 0.2 2.6 2 1 1 3 3 3 0 gag-polypeptide of LTR copia-type zf-C6H2 PF15801.5 NODE_49611_length_375_cov_2.597059_g41720_i0reverse_frame_2 - 3 8.2 7.4 0.27 11.5 1.7 2.2 3 0 0 3 3 3 0 zf-MYND-like zinc finger, mRNA-binding DUF5475 PF17569.2 NODE_49608_length_375_cov_2.694118_g41717_i0forward_frame_2 - 0.087 13.1 3.3 0.083 13.2 1.0 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5475) DUF1280 PF06918.14 NODE_49606_length_375_cov_2.955882_g41715_i0reverse_frame_3 - 0.015 14.9 0.6 0.018 14.7 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1280) DUF4952 PF16310.5 NODE_49606_length_375_cov_2.955882_g41715_i0reverse_frame_3 - 0.079 13.2 0.2 0.16 12.3 0.1 1.6 1 1 0 1 1 1 0 Domian of unknown function (DUF4952) Vanabin-2 PF11437.8 NODE_49602_length_375_cov_3.808824_g41711_i0forward_frame_2 - 0.06 13.5 7.1 0.087 13.0 7.1 1.4 1 0 0 1 1 1 0 Vanadium-binding protein 2 LrgB PF04172.16 NODE_49597_length_375_cov_29.697059_g41706_i0reverse_frame_2 - 0.084 12.4 2.4 0.096 12.2 2.4 1.1 1 0 0 1 1 1 0 LrgB-like family Filo_VP35 PF02097.15 NODE_49597_length_375_cov_29.697059_g41706_i0forward_frame_3 - 0.11 11.6 0.1 0.11 11.6 0.1 1.2 1 0 0 1 1 1 0 Filoviridae VP35 Lebercilin PF15619.6 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 0.0039 16.9 13.7 0.0039 16.9 13.7 2.5 1 1 1 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease FixG_C PF11614.8 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 0.04 14.1 4.9 0.048 13.9 4.9 1.2 1 0 0 1 1 1 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF4407 PF14362.6 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 1 8.7 9.0 1.2 8.4 9.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF5065 PF16723.5 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 1.2 9.2 10.1 1.1 9.3 9.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5065) LsmAD PF06741.13 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 1.7 9.2 11.6 0.29 11.7 3.8 2.4 3 0 0 3 3 3 0 LsmAD domain DUF2433 PF10360.9 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 1.8 8.7 10.0 2.9 8.0 10.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) Exonuc_VII_L PF02601.15 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 2.9 7.4 12.8 3.4 7.1 12.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF5401 PF17380.2 NODE_49596_length_375_cov_45.358824_g41705_i0forward_frame_3 - 7.6 4.5 22.0 8.6 4.3 22.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF4113 PF13438.6 NODE_49591_length_375_cov_61.452941_g41700_i0reverse_frame_2 - 0.051 13.7 0.3 0.086 12.9 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4113) DUF4662 PF15578.6 NODE_49588_length_375_cov_68.408824_g41697_i0reverse_frame_2 - 0.0095 15.8 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4662) Got1 PF04178.12 NODE_49588_length_375_cov_68.408824_g41697_i0forward_frame_3 - 0.042 14.3 9.2 0.064 13.7 9.2 1.3 1 0 0 1 1 1 0 Got1/Sft2-like family RraB PF06877.11 NODE_49584_length_375_cov_78.217647_g41693_i0forward_frame_2 - 0.0099 16.6 2.2 0.0099 16.6 2.2 1.6 2 0 0 2 2 2 1 Regulator of ribonuclease activity B SWIRM-assoc_2 PF16496.5 NODE_49584_length_375_cov_78.217647_g41693_i0forward_frame_2 - 0.095 11.6 26.4 0.11 11.4 26.4 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal AP3D1 PF06375.11 NODE_49584_length_375_cov_78.217647_g41693_i0forward_frame_2 - 1.9 8.7 39.1 0.38 11.0 13.2 2.0 1 1 1 2 2 2 0 AP-3 complex subunit delta-1 CsoS2_M PF12288.8 NODE_49582_length_375_cov_80.423529_g41691_i0forward_frame_2 - 0.063 12.7 0.2 0.07 12.5 0.2 1.0 1 0 0 1 1 1 0 Carboxysome shell peptide mid-region CAP_N PF01213.19 NODE_49572_length_375_cov_127.879412_g41681_i0forward_frame_3 - 1.1 8.7 5.0 1.4 8.3 5.0 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal TMEM18 PF14770.6 NODE_49565_length_375_cov_400.594118_g41674_i0reverse_frame_2 - 0.18 11.8 0.0 0.23 11.5 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 MucBP_2 PF17965.1 NODE_49565_length_375_cov_400.594118_g41674_i0reverse_frame_2 - 2.7 8.6 8.6 0.28 11.8 4.2 1.6 2 0 0 2 2 2 0 Mucin binding domain MttA_Hcf106 PF02416.16 NODE_49565_length_375_cov_400.594118_g41674_i0forward_frame_3 - 5.7 6.4 5.5 0.84 9.0 0.4 2.2 2 0 0 2 2 2 0 mttA/Hcf106 family DUF4714 PF15833.5 NODE_49565_length_375_cov_400.594118_g41674_i0forward_frame_3 - 9.6 6.2 6.9 15 5.5 1.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4714) TMCO5 PF14992.6 NODE_49558_length_375_cov_56763.582353_g41667_i0reverse_frame_3 - 0.05 13.2 0.2 0.077 12.6 0.2 1.2 1 0 0 1 1 1 0 TMCO5 family MUG113 PF13455.6 NODE_49558_length_375_cov_56763.582353_g41667_i0reverse_frame_2 - 0.069 13.8 0.1 0.15 12.7 0.1 1.5 1 0 0 1 1 1 0 Meiotically up-regulated gene 113 Mss4 PF04421.13 ORF99093 - 4.9e-07 29.8 0.0 6.1e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Mss4 protein Mt_ATP-synt_B PF05405.14 ORF9884 - 0.023 14.3 1.3 0.027 14.1 1.3 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Ant_C PF05586.11 ORF9884 - 0.072 13.7 0.2 0.1 13.2 0.2 1.2 1 0 0 1 1 1 0 Anthrax receptor C-terminus region CH_2 PF06294.11 ORF9884 - 4.3 7.5 7.0 9.6 6.4 2.2 2.1 1 1 1 2 2 2 0 CH-like domain in sperm protein RCC1_2 PF13540.6 ORF98750 - 3e-09 36.4 2.3 0.15 11.9 0.0 3.4 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF1295 PF06966.12 ORF98062 - 0.0054 16.3 0.0 0.0063 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PsiE PF06146.12 ORF98062 - 0.023 15.1 0.2 0.034 14.5 0.2 1.3 1 0 0 1 1 1 0 Phosphate-starvation-inducible E NikR_C PF08753.11 ORF97894 - 0.077 13.2 0.7 0.12 12.5 0.7 1.3 1 0 0 1 1 1 0 NikR C terminal nickel binding domain CxC2 PF18803.1 ORF96436 - 0.001 19.2 0.3 0.0016 18.6 0.2 1.3 1 1 0 1 1 1 1 CxC2 like cysteine cluster associated with KDZ transposases FliD_N PF02465.18 ORF94533 - 0.0069 17.0 1.2 0.0089 16.7 1.2 1.2 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus bZIP_1 PF00170.21 ORF94533 - 0.019 15.0 6.1 0.032 14.3 6.1 1.3 1 0 0 1 1 1 0 bZIP transcription factor DivIC PF04977.15 ORF94533 - 0.11 12.2 2.0 0.17 11.7 2.0 1.3 1 0 0 1 1 1 0 Septum formation initiator EMP24_GP25L PF01105.24 ORF94533 - 0.94 9.4 3.8 1.7 8.5 3.8 1.4 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Cytochrome-c551 PF10643.9 ORF93129 - 0.053 13.1 4.9 0.065 12.8 4.9 1.1 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 TMEM208_SND2 PF05620.11 ORF93129 - 8.3 6.2 6.8 0.92 9.3 2.6 1.6 2 0 0 2 2 2 0 SRP-independent targeting protein 2/TMEM208 Hum_adeno_E3A PF05393.11 ORF92726 - 0.057 13.4 0.3 0.1 12.6 0.3 1.4 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein Defensin_int PF17858.1 ORF90910 - 0.13 12.3 1.1 0.46 10.5 0.1 2.2 2 0 0 2 2 2 0 Platypus intermediate defensin-like peptide Med14 PF08638.11 ORF90007 - 0.014 14.8 0.4 0.016 14.6 0.4 1.1 1 0 0 1 1 1 0 Mediator complex subunit MED14 Tir_receptor_M PF03549.14 ORF8944 - 0.014 15.7 0.1 0.033 14.5 0.0 1.6 1 1 0 1 1 1 0 Translocated intimin receptor (Tir) intimin-binding domain DUF4712 PF15830.5 ORF8944 - 0.066 12.9 6.2 0.077 12.7 6.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4712) MAP17 PF15807.5 ORF8944 - 0.66 10.2 8.2 0.94 9.7 8.2 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 RNase_HII PF01351.18 ORF8944 - 4.8 7.0 8.8 1.7 8.5 5.5 1.7 1 1 1 2 2 2 0 Ribonuclease HII MTBP_N PF14918.6 ORF88191 - 0.04 13.4 0.3 0.046 13.2 0.3 1.1 1 0 0 1 1 1 0 MDM2-binding Polyoma_lg_T_C PF06431.11 ORF87553 - 0.11 11.3 1.8 0.11 11.3 1.8 1.1 1 0 0 1 1 1 0 Polyomavirus large T antigen C-terminus Antimicrobial23 PF16048.5 ORF86984 - 0.0017 18.0 0.4 0.0041 16.8 0.4 1.7 1 0 0 1 1 1 1 Frog antimicrobial peptide CiPC PF15800.5 ORF86375 - 0.038 13.7 0.1 0.046 13.4 0.1 1.2 1 0 0 1 1 1 0 Clock interacting protein circadian Dpy-30 PF05186.13 ORF86146 - 0.0098 15.6 0.3 0.015 15.0 0.3 1.3 1 0 0 1 1 1 1 Dpy-30 motif DUF4763 PF15960.5 ORF86146 - 0.018 14.4 3.7 0.02 14.2 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) PspB PF06667.12 ORF86146 - 0.028 14.5 1.2 0.048 13.7 1.2 1.3 1 0 0 1 1 1 0 Phage shock protein B DUF1722 PF08349.11 ORF86146 - 0.14 12.4 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) Spc24 PF08286.11 ORF86146 - 0.15 12.3 2.6 0.21 11.8 2.6 1.3 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF35_N PF12172.8 ORF85141 - 0.43 10.5 0.2 0.43 10.5 0.2 3.6 3 2 1 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Deltaretro_Tax PF05599.11 ORF83825 - 0.088 13.3 4.2 0.12 12.9 2.4 2.0 2 0 0 2 2 2 0 Deltaretrovirus Tax protein DUF1351 PF07083.11 ORF82040 - 0.0012 18.7 0.3 0.0017 18.2 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1351) zf-C2H2_11 PF16622.5 ORF82040 - 0.0035 17.1 0.1 0.0074 16.0 0.1 1.6 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2_4 PF13894.6 ORF82040 - 0.0038 18.0 3.0 0.0075 17.0 0.1 2.9 3 0 0 3 3 3 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF82040 - 0.01 16.2 0.1 0.01 16.2 0.1 2.7 3 0 0 3 3 3 0 Zinc finger, C2H2 type Glyco_hydro_127 PF07944.12 ORF82040 - 0.038 12.5 0.3 0.045 12.2 0.3 1.1 1 0 0 1 1 1 0 Beta-L-arabinofuranosidase, GH127 zf-H2C2_2 PF13465.6 ORF82040 - 0.75 10.3 0.1 0.75 10.3 0.1 3.0 4 0 0 4 4 4 0 Zinc-finger double domain SHP PF03579.13 ORF81648 - 0.0012 18.8 8.5 0.087 12.8 0.5 2.5 1 1 1 2 2 2 2 Small hydrophobic protein RelB_transactiv PF16181.5 ORF81054 - 0.12 12.7 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 RelB transactivation domain DUF4501 PF14946.6 ORF80535 - 0.42 10.7 4.8 0.28 11.2 3.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4501) TipE PF16972.5 ORF80535 - 0.48 9.5 6.7 0.58 9.3 6.7 1.1 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE Pep1_7 PF17232.2 ORF80535 - 3.8 8.1 5.6 5.3 7.6 5.6 1.3 1 0 0 1 1 1 0 Elicitor peptide 1-7 RCC1_2 PF13540.6 ORF77663 - 4.5e-10 39.1 3.7 1.2e-08 34.5 0.0 2.5 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF77663 - 0.00015 22.3 2.2 0.054 14.1 0.0 3.7 3 1 0 3 3 3 1 Regulator of chromosome condensation (RCC1) repeat DZR PF12773.7 ORF77553 - 0.86 9.7 4.8 12 6.0 0.1 2.7 3 0 0 3 3 3 0 Double zinc ribbon zf-RanBP PF00641.18 ORF77553 - 3.7 6.9 8.1 16 4.9 0.1 3.6 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others zn-ribbon_14 PF16503.5 ORF77348 - 0.026 14.0 3.3 0.026 14.0 3.3 2.1 2 0 0 2 2 2 0 Zinc-ribbon Stc1 PF12898.7 ORF77348 - 0.038 14.5 5.2 0.84 10.2 0.6 2.2 1 1 1 2 2 2 0 Stc1 domain Tudor_FRX1 PF18336.1 ORF77224 - 0.26 11.2 1.4 9.5 6.2 0.0 2.6 3 0 0 3 3 3 0 Fragile X mental retardation Tudor domain KASH_CCD PF14662.6 ORF76600 - 0.0029 17.5 0.7 0.0037 17.1 0.7 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH MA3 PF02847.17 ORF76600 - 0.03 14.3 1.4 0.042 13.8 1.4 1.2 1 0 0 1 1 1 0 MA3 domain IL6 PF00489.17 ORF76600 - 0.049 13.2 1.8 0.068 12.7 1.6 1.4 1 1 0 1 1 1 0 Interleukin-6/G-CSF/MGF family Toxin_19 PF08088.12 ORF72773 - 0.81 9.9 8.9 1.7 8.8 1.6 3.1 3 0 0 3 3 3 0 Conotoxin I-superfamily OAD_beta PF03977.13 ORF72482 - 0.089 11.8 0.1 0.1 11.6 0.1 1.1 1 0 0 1 1 1 0 Na+-transporting oxaloacetate decarboxylase beta subunit zinc_ribbon_9 PF14369.6 ORF70753 - 4.4 7.6 7.5 6.7 7.1 3.2 2.5 2 0 0 2 2 2 0 zinc-ribbon LLC1 PF14945.6 ORF69616 - 7.6e-06 26.5 2.7 1.2e-05 25.9 2.7 1.5 1 1 0 1 1 1 1 Normal lung function maintenance, Low in Lung Cancer 1 protein LCE6A PF15858.5 ORF68469 - 1.7 9.4 10.3 0.077 13.7 4.5 1.8 1 1 1 2 2 2 0 Late cornified envelope protein 6A family DUF2207 PF09972.9 ORF6771 - 0.92 8.2 3.5 0.95 8.2 3.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phage_holin_3_6 PF07332.11 ORF6771 - 1.8 8.6 5.8 2.4 8.2 5.8 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III PspB PF06667.12 ORF6771 - 6.3 6.9 6.3 1.2 9.2 2.6 1.7 1 1 1 2 2 2 0 Phage shock protein B Imm58 PF15581.6 ORF66988 - 0.17 12.0 0.0 0.24 11.5 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 58 WXG100 PF06013.12 ORF66947 - 0.31 11.3 2.0 0.52 10.6 0.1 2.0 2 0 0 2 2 2 0 Proteins of 100 residues with WXG WD40 PF00400.32 ORF66834 - 0.00039 21.2 0.0 0.00075 20.3 0.0 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat Med28 PF11594.8 ORF66834 - 0.069 13.2 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Mediator complex subunit 28 DUF3786 PF12654.7 ORF65363 - 0.087 12.4 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3786) Fer4_6 PF12837.7 ORF65342 - 3.2 8.0 8.2 5.6 7.2 2.0 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain Telethonin PF09470.10 ORF65100 - 0.11 12.4 5.9 0.12 12.3 5.9 1.1 1 0 0 1 1 1 0 Telethonin protein Presenilin PF01080.17 ORF63806 - 0.8 8.4 10.2 0.89 8.2 10.2 1.0 1 0 0 1 1 1 0 Presenilin Ank_2 PF12796.7 ORF63632 - 1.4e-09 38.4 0.1 3.1e-08 34.1 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF63632 - 2e-08 34.4 0.1 0.0057 16.9 0.0 2.8 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF63632 - 5e-08 32.6 0.0 0.0097 16.4 0.1 2.8 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF63632 - 0.00018 21.8 0.1 0.55 10.8 0.1 2.8 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF63632 - 0.0015 19.0 0.1 0.0075 16.8 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) DUF2481 PF10654.9 ORF63632 - 0.17 11.9 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) DUF2284 PF10050.9 ORF634 - 0.027 14.2 2.9 0.089 12.5 0.0 2.1 1 1 1 2 2 2 0 Predicted metal-binding protein (DUF2284) MENTAL PF10457.9 ORF63369 - 0.38 10.6 8.7 0.36 10.6 7.9 1.3 1 1 0 1 1 1 0 Cholesterol-capturing domain PDZ_1 PF12812.7 ORF63314 - 0.038 14.0 0.0 0.062 13.3 0.0 1.4 1 0 0 1 1 1 0 PDZ-like domain IQCJ-SCHIP1 PF15157.6 ORF61802 - 0.17 11.7 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif FA_FANCE PF11510.8 ORF60993 - 2.8 7.2 9.0 3.5 6.9 9.0 1.1 1 0 0 1 1 1 0 Fanconi Anaemia group E protein FANCE TM231 PF10149.9 ORF60982 - 1e-13 51.3 0.4 1.1e-13 51.2 0.4 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 FtsK_alpha PF17854.1 ORF60982 - 0.072 13.2 0.1 0.088 13.0 0.1 1.3 1 0 0 1 1 1 0 FtsK alpha domain Toxin_12 PF07740.12 ORF59919 - 0.13 13.0 2.4 0.22 12.2 2.4 1.4 1 0 0 1 1 1 0 Ion channel inhibitory toxin FAM199X PF15814.5 ORF59919 - 5.1 6.1 9.0 5.9 5.9 9.0 1.2 1 0 0 1 1 1 0 Protein family FAM199X TFIID_NTD2 PF04494.15 ORF59672 - 0.0048 17.1 0.1 0.0073 16.5 0.1 1.3 1 0 0 1 1 1 1 WD40 associated region in TFIID subunit, NTD2 domain AGA2 PF17366.2 ORF59672 - 0.016 14.9 0.0 0.03 14.0 0.0 1.4 1 0 0 1 1 1 0 A-agglutinin-binding subunit Aga2 RCC1_2 PF13540.6 ORF59163 - 4.5e-10 39.1 3.7 1.2e-08 34.5 0.0 2.5 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF59163 - 0.00015 22.3 2.2 0.054 14.1 0.0 3.7 3 1 0 3 3 3 1 Regulator of chromosome condensation (RCC1) repeat DUF3452 PF11934.8 ORF58473 - 0.054 13.1 4.0 0.2 11.2 4.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) Myb_DNA-bind_3 PF12776.7 ORF58473 - 0.092 13.7 0.8 0.23 12.5 0.2 1.8 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain PI3K_P85_iSH2 PF16454.5 ORF58473 - 0.34 10.5 7.0 3.3 7.3 0.4 2.2 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain ResIII PF04851.15 ORF58473 - 0.35 10.9 3.1 0.52 10.3 3.1 1.4 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit DUF2946 PF11162.8 ORF57424 - 0.0053 17.4 0.3 0.0067 17.1 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2946) Orbi_VP5 PF00901.17 ORF57424 - 0.24 9.8 0.3 0.29 9.5 0.3 1.1 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP5 Tir_receptor_C PF07489.11 ORF56738 - 0.03 14.3 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) C-terminus DUF2070 PF09843.9 ORF55440 - 0.58 8.4 4.1 0.61 8.3 4.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Herpes_US9 PF06072.11 ORF55074 - 0.61 10.0 3.2 1.5 8.8 2.1 2.2 1 1 1 2 2 2 0 Alphaherpesvirus tegument protein US9 HflK_N PF12221.8 ORF54005 - 0.049 13.7 0.0 0.14 12.2 0.0 1.8 2 0 0 2 2 2 0 Bacterial membrane protein N terminal DUF92 PF01940.16 ORF52287 - 0.0044 16.5 0.0 0.0054 16.2 0.0 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF92 ABC_tran PF00005.27 ORF52031 - 2.7e-13 50.6 0.0 4.2e-13 50.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF52031 - 0.00037 20.0 0.0 0.00045 19.7 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF52031 - 0.00076 19.4 0.0 0.00077 19.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 ORF52031 - 0.0011 19.1 0.1 0.036 14.3 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit THF_DHG_CYH PF00763.23 ORF51691 - 0.084 13.1 0.0 0.18 12.1 0.0 1.6 1 1 1 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain zf_C2H2_6 PF18450.1 ORF49503 - 9.6 6.0 7.1 21 4.9 0.1 3.0 3 0 0 3 3 3 0 Zinc Finger domain DUF751 PF05421.11 ORF49285 - 0.0079 16.9 1.2 0.33 11.7 0.2 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF751) UPF0126 PF03458.13 ORF49120 - 4.5e-23 80.9 5.8 4.5e-23 80.9 5.8 1.6 2 0 0 2 2 2 1 UPF0126 domain LrgB PF04172.16 ORF49120 - 0.0032 17.0 1.2 0.0046 16.5 1.2 1.3 1 0 0 1 1 1 1 LrgB-like family Glyco_transf_4 PF13439.6 ORF49120 - 0.0079 16.2 0.2 0.0087 16.1 0.2 1.1 1 0 0 1 1 1 1 Glycosyltransferase Family 4 ThrE PF06738.12 ORF49120 - 0.011 15.1 4.6 0.015 14.7 4.6 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF4203 PF13886.6 ORF49120 - 0.015 15.0 7.8 0.018 14.7 7.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4203) DUF3142 PF11340.8 ORF47393 - 0.011 15.6 0.5 0.31 10.8 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3142) Prok-E2_D PF14460.6 ORF46844 - 0.09 12.5 0.1 0.1 12.3 0.1 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family D YacG PF03884.14 ORF46578 - 0.48 10.2 7.4 0.28 10.9 0.7 2.7 2 2 0 2 2 2 0 DNA gyrase inhibitor YacG PRP1_N PF06424.12 ORF4623 - 1.1 9.6 7.0 2.2 8.7 0.0 2.2 1 1 1 2 2 2 0 PRP1 splicing factor, N-terminal Csm4_C PF17953.1 ORF44758 - 0.19 11.6 0.0 0.33 10.8 0.0 1.5 1 0 0 1 1 1 0 CRISPR Csm4 C-terminal domain DUF2433 PF10360.9 ORF44295 - 0.051 13.7 0.1 0.075 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) RNase_PH_C PF03725.15 ORF44075 - 2.5e-13 49.9 0.3 3.2e-13 49.5 0.3 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 MT PF12777.7 ORF43940 - 2.4e-05 23.5 0.6 2.8e-05 23.3 0.6 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor SHIPPO-rpt PF07004.12 ORF41576 - 4.1e-10 40.1 7.7 0.0025 18.7 0.3 3.6 3 0 0 3 3 3 3 Sperm-tail PG-rich repeat DUF5432 PF17497.2 ORF40902 - 0.18 11.9 5.9 0.051 13.7 2.3 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5432) Cytochrom_B559 PF00283.19 ORF40083 - 2.8e-14 52.3 5.4 4.6e-14 51.6 5.4 1.4 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits TRSP PF12500.8 ORF40083 - 0.052 13.4 0.1 0.067 13.1 0.1 1.2 1 0 0 1 1 1 0 TRSP domain C terminus to PRTase_2 Gp_dh_N PF00044.24 ORF3853 - 0.15 12.4 0.1 0.2 12.0 0.1 1.3 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NAD_synthase PF02540.17 ORF36527 - 7.9e-42 143.0 0.0 9e-42 142.9 0.0 1.0 1 0 0 1 1 1 1 NAD synthase PP2C PF00481.21 ORF35496 - 2.7e-14 53.4 0.0 3e-14 53.3 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF35496 - 0.012 15.6 0.0 0.012 15.5 0.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) FliO PF04347.13 ORF35496 - 0.079 13.2 0.2 14 6.1 0.0 2.3 1 1 1 2 2 2 0 Flagellar biosynthesis protein, FliO Opy2 PF09463.10 ORF35124 - 0.041 14.2 2.7 0.041 14.2 2.7 2.3 3 0 0 3 3 3 0 Opy2 protein DUF5136 PF17199.4 ORF34824 - 0.73 9.6 4.3 0.73 9.6 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF5136) Tox-GHH PF15636.6 ORF34224 - 0.076 13.0 1.3 0.52 10.3 0.1 2.1 1 1 1 2 2 2 0 GHH signature containing HNH/Endo VII superfamily nuclease toxin Calpain_III PF01067.22 ORF34125 - 0.00061 20.1 0.3 0.0065 16.7 0.3 1.9 1 1 0 1 1 1 1 Calpain large subunit, domain III RE_Eco29kI PF09517.10 ORF3411 - 0.067 12.8 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Eco29kI restriction endonuclease O_anti_polymase PF01901.16 ORF34031 - 0.0088 15.3 0.0 0.01 15.2 0.0 1.0 1 0 0 1 1 1 1 Putative O-antigen polymerase She9_MDM33 PF05546.11 ORF33145 - 0.011 15.5 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 She9 / Mdm33 family PHD PF00628.29 ORF33145 - 0.13 12.2 5.3 0.7 9.8 5.6 2.0 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF33145 - 0.27 11.4 6.3 0.49 10.6 6.3 1.4 1 0 0 1 1 1 0 B-box zinc finger Gamma-thionin PF00304.20 ORF3304 - 7.1 7.0 9.5 0.69 10.2 0.9 2.7 3 0 0 3 3 3 0 Gamma-thionin family FliD_N PF02465.18 ORF32910 - 0.0069 17.0 1.2 0.0089 16.7 1.2 1.2 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus bZIP_1 PF00170.21 ORF32910 - 0.019 15.0 6.1 0.032 14.3 6.1 1.3 1 0 0 1 1 1 0 bZIP transcription factor DivIC PF04977.15 ORF32910 - 0.11 12.2 2.0 0.17 11.7 2.0 1.3 1 0 0 1 1 1 0 Septum formation initiator EMP24_GP25L PF01105.24 ORF32910 - 0.94 9.4 3.8 1.7 8.5 3.8 1.4 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD PMT_4TMC PF16192.5 ORF32855 - 0.14 11.7 9.6 0.5 9.9 10.0 1.7 1 1 1 2 2 2 0 C-terminal four TMM region of protein-O-mannosyltransferase DUF1980 PF09323.10 ORF32855 - 1.1 9.2 9.7 0.24 11.3 5.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) DUF2070 PF09843.9 ORF32855 - 9.1 4.4 12.4 12 4.1 12.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF45 PF01863.17 ORF30827 - 0.028 14.4 0.1 0.038 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF45 Comm PF15957.5 ORF3022 - 0.44 10.9 2.6 0.6 10.5 2.6 1.2 1 0 0 1 1 1 0 Commissureless Plant_zn_clust PF10533.9 ORF28281 - 3.2 7.8 8.6 7.7 6.6 5.3 2.3 2 0 0 2 2 2 0 Plant zinc cluster domain Phage_term_smal PF05944.12 ORF26817 - 0.1 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Phage small terminase subunit HlyD_D23 PF16576.5 ORF26639 - 0.14 11.3 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tli4_N PF18443.1 ORF2593 - 0.048 14.0 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 Tle cognate immunity protein 4 N-terminal domain Orthopox_B11R PF07033.11 ORF2593 - 0.092 12.6 2.4 5.6 6.8 0.2 2.4 2 0 0 2 2 2 0 Orthopoxvirus B11R protein DUF2076 PF09849.9 ORF25580 - 0.93 9.5 20.2 2 8.4 20.2 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF3557 PF12078.8 ORF2347 - 0.029 14.3 0.1 0.035 14.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3557) PGG PF13962.6 ORF22739 - 1.1 9.0 12.3 8.8 6.2 10.0 2.1 1 1 1 2 2 2 0 Domain of unknown function PMT_4TMC PF16192.5 ORF22492 - 0.14 11.7 9.6 0.5 9.9 10.0 1.7 1 1 1 2 2 2 0 C-terminal four TMM region of protein-O-mannosyltransferase DUF1980 PF09323.10 ORF22492 - 1.1 9.2 9.7 0.24 11.3 5.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1980) DUF2070 PF09843.9 ORF22492 - 9.1 4.4 12.4 12 4.1 12.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Phage_Integr_2 PF13009.6 ORF21858 - 0.02 14.0 0.9 0.023 13.8 0.9 1.0 1 0 0 1 1 1 0 Putative phage integrase RNA_helicase PF00910.22 ORF21858 - 0.047 14.1 0.6 0.13 12.7 0.2 1.9 1 1 1 2 2 2 0 RNA helicase SLX9 PF15341.6 ORF2172 - 3.5e-06 27.4 18.2 4.1e-06 27.2 18.2 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein SLX9 YjbH PF06082.11 ORF2172 - 0.11 11.3 3.3 0.11 11.2 3.3 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH HSP70 PF00012.20 ORF2172 - 2.7 6.1 15.6 3 5.9 15.6 1.0 1 0 0 1 1 1 0 Hsp70 protein SHS2_FTSA PF02491.20 ORF2054 - 0.027 14.8 2.3 0.03 14.7 0.3 2.0 3 0 0 3 3 3 0 SHS2 domain inserted in FTSA zf_UBZ PF18439.1 ORF19867 - 2.9e-06 26.7 1.6 5.3e-06 25.9 1.6 1.4 1 0 0 1 1 1 1 Ubiquitin-Binding Zinc Finger zf-C2HE PF16278.5 ORF19867 - 0.00021 21.7 2.0 0.00029 21.2 2.0 1.3 1 0 0 1 1 1 1 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2 PF00096.26 ORF19867 - 0.023 15.1 4.3 0.023 15.1 4.3 2.0 2 0 0 2 2 2 0 Zinc finger, C2H2 type RrnaAD PF00398.20 ORF19867 - 0.059 12.4 0.0 0.08 12.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase zf_C2H2_ZHX PF18387.1 ORF19867 - 0.49 10.1 4.8 1.7 8.3 4.9 1.7 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain DUF2642 PF10842.8 ORF19676 - 0.18 11.7 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2642) UL21a PF17636.2 ORF19005 - 0.052 13.6 0.1 0.081 12.9 0.1 1.3 1 0 0 1 1 1 0 Viral Unique Long protein 21a 60KD_IMP PF02096.20 ORF17898 - 0.038 13.9 2.4 0.069 13.0 2.4 1.4 1 1 0 1 1 1 0 60Kd inner membrane protein RAM PF15320.6 ORF17244 - 1.5 9.4 6.3 0.87 10.2 4.0 1.9 1 1 1 2 2 2 0 mRNA cap methylation, RNMT-activating mini protein DUF1611 PF07755.11 ORF17194 - 0.08 12.2 0.0 0.087 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain ACT_6 PF13740.6 ORF17194 - 0.13 12.2 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 ACT domain DUF4186 PF13811.6 ORF15768 - 0.069 13.2 1.4 0.092 12.8 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) DAGK_cat PF00781.24 ORF15434 - 1e-10 41.3 0.0 1.2e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain DREV PF05219.12 ORF15434 - 0.08 12.0 0.0 0.091 11.8 0.0 1.2 1 1 0 1 1 1 0 DREV methyltransferase EAL PF00563.20 ORF1542 - 7.2e-34 117.3 0.0 9.9e-34 116.9 0.0 1.1 1 0 0 1 1 1 1 EAL domain DUF871 PF05913.11 ORF1542 - 0.072 12.3 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF871) Hom_end PF05204.14 ORF1542 - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Homing endonuclease Glyco_hydro_35 PF01301.19 ORF152740 - 0.08 12.6 2.2 0.096 12.3 2.2 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 35 TetR_C_33 PF13305.6 ORF152196 - 0.016 15.9 0.3 0.028 15.2 0.3 1.4 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Vps54 PF07928.12 ORF151806 - 0.12 12.9 0.0 0.18 12.2 0.0 1.2 1 0 0 1 1 1 0 Vps54-like protein DUF378 PF04070.12 ORF151447 - 0.052 13.4 0.1 0.07 13.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF378) Tudor_FRX1 PF18336.1 ORF151262 - 0.26 11.2 1.4 9.5 6.2 0.0 2.6 3 0 0 3 3 3 0 Fragile X mental retardation Tudor domain Orexin_rec2 PF03827.13 ORF151228 - 0.086 12.8 0.3 0.14 12.1 0.3 1.3 1 0 0 1 1 1 0 Orexin receptor type 2 Pkinase PF00069.25 ORF15067 - 7e-05 22.3 0.1 8.6e-05 22.0 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pet20 PF08692.10 ORF15067 - 0.011 16.4 0.0 0.015 16.1 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial protein Pet20 Kelch_1 PF01344.25 ORF147721 - 1.7 8.3 9.1 0.48 10.1 2.0 2.3 2 0 0 2 2 2 0 Kelch motif Myticin-prepro PF10690.9 ORF146749 - 1.7 9.0 5.3 5.2 7.4 0.6 2.2 2 0 0 2 2 2 0 Myticin pre-proprotein from the mussel SEFIR PF08357.11 ORF145702 - 0.024 14.9 0.1 0.03 14.6 0.1 1.1 1 0 0 1 1 1 0 SEFIR domain Phage_Integr_2 PF13009.6 ORF145297 - 0.02 14.0 0.9 0.023 13.8 0.9 1.0 1 0 0 1 1 1 0 Putative phage integrase RNA_helicase PF00910.22 ORF145297 - 0.047 14.1 0.6 0.13 12.7 0.2 1.9 1 1 1 2 2 2 0 RNA helicase TPR_1 PF00515.28 ORF144548 - 0.0055 16.5 0.3 0.031 14.1 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF144548 - 0.017 15.2 0.3 0.072 13.2 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat PSS PF03034.15 ORF144548 - 0.032 14.0 0.3 0.041 13.6 0.3 1.1 1 0 0 1 1 1 0 Phosphatidyl serine synthase ANAPC3 PF12895.7 ORF144548 - 0.045 14.0 0.2 0.076 13.3 0.2 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_3 PF07720.12 ORF144548 - 0.086 12.9 3.7 0.2 11.7 0.2 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF144548 - 0.09 12.8 0.7 1.2 9.3 0.1 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF144548 - 0.17 12.6 0.0 0.25 12.0 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TMEM190 PF15431.6 ORF143673 - 0.13 12.4 2.3 0.16 12.2 1.8 1.4 1 1 0 1 1 1 0 Transmembrane protein 190 EZH2_WD-Binding PF11616.8 ORF143673 - 8.3 6.6 14.4 2.6 8.2 0.2 3.8 3 1 1 4 4 4 0 WD repeat binding protein EZH2 Mucin-like PF16058.5 ORF14249 - 0.1 12.7 1.8 1.2 9.3 1.0 2.0 1 1 1 2 2 2 0 Mucin-like FA_FANCE PF11510.8 ORF142240 - 2.8 7.2 9.0 3.5 6.9 9.0 1.1 1 0 0 1 1 1 0 Fanconi Anaemia group E protein FANCE EF-hand_1 PF00036.32 ORF141473 - 1.3e-11 43.2 4.3 1.2e-06 27.6 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF141473 - 1.4e-11 43.3 4.0 4.1e-06 26.3 0.5 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF141473 - 7.5e-11 42.3 7.6 1.7e-10 41.2 6.0 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF141473 - 0.00024 20.9 7.6 0.074 12.9 0.5 3.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF141473 - 0.0039 16.6 5.5 0.037 13.5 0.7 2.4 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF141473 - 0.0064 16.8 2.0 0.081 13.3 0.2 2.1 1 1 1 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF141473 - 0.019 14.8 3.8 0.14 12.0 0.5 2.2 2 0 0 2 2 2 0 EF hand EF-hand_9 PF14658.6 ORF141473 - 0.041 14.2 0.4 0.063 13.6 0.4 1.3 1 0 0 1 1 1 0 EF-hand domain DUF1842 PF08896.10 ORF141472 - 0.092 13.0 0.1 0.12 12.6 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1842) Pollen_allerg_1 PF01357.21 ORF141472 - 0.33 11.0 5.4 3 7.9 0.8 2.9 1 1 1 2 2 2 0 Pollen allergen RCC1_2 PF13540.6 ORF140275 - 4.5e-10 39.1 3.7 1.2e-08 34.5 0.0 2.5 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF140275 - 0.00015 22.3 2.2 0.054 14.1 0.0 3.7 3 1 0 3 3 3 1 Regulator of chromosome condensation (RCC1) repeat Cytochrom_B559 PF00283.19 ORF138296 - 2.8e-14 52.3 5.4 4.6e-14 51.6 5.4 1.4 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits TRSP PF12500.8 ORF138296 - 0.052 13.4 0.1 0.067 13.1 0.1 1.2 1 0 0 1 1 1 0 TRSP domain C terminus to PRTase_2 PhoLip_ATPase_C PF16212.5 ORF136539 - 0.00032 20.5 8.6 0.00036 20.4 8.6 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal MarC PF01914.17 ORF134168 - 5.3e-42 143.5 0.5 5.9e-42 143.4 0.5 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein SPW PF03779.14 ORF134168 - 0.043 13.4 2.4 0.08 12.5 1.4 1.9 1 1 1 2 2 2 0 SPW repeat Phage_holin_1 PF04531.13 ORF134168 - 0.25 11.9 1.0 0.37 11.4 1.0 1.3 1 0 0 1 1 1 0 Bacteriophage holin DUF5090 PF17009.5 ORF133063 - 6.3 6.7 15.3 7.5 6.5 15.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Adaptin_N PF01602.20 ORF132483 - 2.6e-24 85.7 0.0 2.8e-24 85.6 0.0 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF132483 - 3.2e-20 72.8 0.0 9.4e-20 71.3 0.0 1.6 2 0 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 ORF132483 - 0.0025 18.2 0.0 0.011 16.1 0.0 1.9 1 1 0 1 1 1 1 HEAT repeats CDC27 PF09507.10 ORF130922 - 0.017 14.6 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks212.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks212.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks212.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks212.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Tim54 PF11711.8 ORF129482 - 0.0036 16.1 8.9 0.0043 15.9 8.9 1.1 1 0 0 1 1 1 1 Inner membrane protein import complex subunit Tim54 CDC45 PF02724.14 ORF129482 - 0.023 13.0 10.8 0.025 12.9 10.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Zip PF02535.22 ORF129482 - 0.053 12.7 3.5 0.055 12.7 3.5 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter RR_TM4-6 PF06459.12 ORF129482 - 0.058 13.2 9.1 0.066 13.0 9.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Sec62 PF03839.16 ORF129482 - 0.067 12.7 11.9 0.076 12.5 11.9 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Vfa1 PF08432.10 ORF129482 - 0.1 12.9 15.4 0.12 12.7 15.4 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Connexin PF00029.19 ORF129482 - 0.11 12.2 4.3 0.14 11.9 4.3 1.3 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 ORF129482 - 0.17 10.6 4.3 0.18 10.5 4.3 1.1 1 0 0 1 1 1 0 Presenilin Serinc PF03348.15 ORF129482 - 0.29 10.0 2.1 0.3 10.0 2.1 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) CLN3 PF02487.17 ORF129482 - 0.3 10.1 3.6 0.32 10.0 3.6 1.1 1 0 0 1 1 1 0 CLN3 protein DUF872 PF05915.12 ORF129482 - 0.36 11.0 1.8 0.62 10.2 1.8 1.6 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Astro_capsid_p PF12226.8 ORF129482 - 0.36 9.9 9.8 0.46 9.6 9.8 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF913 PF06025.12 ORF129482 - 0.52 9.2 5.6 0.58 9.1 5.6 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) SspB PF04386.13 ORF129482 - 0.64 9.9 9.6 0.91 9.4 9.6 1.2 1 0 0 1 1 1 0 Stringent starvation protein B TRAP_alpha PF03896.16 ORF129482 - 0.84 8.8 9.8 1 8.5 9.8 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit RRN3 PF05327.11 ORF129482 - 1.2 7.6 12.7 1.3 7.5 12.7 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Peptidase_S49_N PF08496.10 ORF129482 - 1.5 8.9 10.7 2 8.5 10.7 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DNA_pol_phi PF04931.13 ORF129482 - 1.6 6.8 16.3 1.8 6.6 16.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi BPL_N PF09825.9 ORF129482 - 1.6 7.7 7.0 1.9 7.5 7.0 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal RNA_pol_Rpc4 PF05132.14 ORF129482 - 1.7 9.1 12.0 2.2 8.7 12.0 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 V_ATPase_I PF01496.19 ORF129482 - 1.7 6.5 10.0 2 6.2 10.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RPN2_C PF18004.1 ORF129482 - 4 7.3 18.9 6.4 6.7 18.9 1.3 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain NOA36 PF06524.12 ORF129482 - 4.4 6.5 14.6 5.5 6.2 14.6 1.1 1 0 0 1 1 1 0 NOA36 protein Sporozoite_P67 PF05642.11 ORF129482 - 7.7 4.5 10.2 9.1 4.2 10.2 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Ureide_permease PF07168.11 ORF129482 - 8.3 5.0 5.3 9.4 4.9 5.3 1.1 1 0 0 1 1 1 0 Ureide permease Haem_degrading PF03928.14 ORF129174 - 7.5e-32 109.9 3.7 8.3e-32 109.7 3.7 1.0 1 0 0 1 1 1 1 Haem-degrading Diacid_rec PF05651.13 ORF129174 - 0.23 11.1 2.4 0.37 10.5 1.6 1.8 1 1 1 2 2 2 0 Putative sugar diacid recognition DUF4834 PF16118.5 ORF128507 - 0.043 14.8 1.7 0.054 14.5 1.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Herpes_UL3 PF03369.13 ORF128247 - 1.3 9.5 9.0 0.21 12.1 1.0 2.1 1 1 1 2 2 2 0 Herpesvirus UL3 protein WD40 PF00400.32 ORF126614 - 4.9e-11 43.0 5.0 0.0062 17.4 0.0 3.1 3 0 0 3 3 3 3 WD domain, G-beta repeat DUF3589 PF12141.8 ORF126614 - 0.0056 15.3 0.0 0.0065 15.1 0.0 1.0 1 0 0 1 1 1 1 Beta-mannosyltransferases Ephrin PF00812.17 ORF126614 - 0.04 13.9 0.1 0.053 13.5 0.1 1.2 1 0 0 1 1 1 0 Ephrin DAGK_acc PF00609.19 ORF125581 - 6.9e-05 23.2 0.0 0.00011 22.6 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain CCT PF06203.14 ORF12539 - 1.4e-07 31.4 1.4 1.4e-07 31.4 1.4 1.9 2 0 0 2 2 2 1 CCT motif DNA_binding_2 PF13724.6 ORF12539 - 0.026 14.9 0.7 0.047 14.1 0.7 1.4 1 0 0 1 1 1 0 DNA-binding domain Vmethyltransf PF01660.17 ORF12539 - 0.055 12.3 0.1 0.063 12.1 0.1 1.1 1 0 0 1 1 1 0 Viral methyltransferase DUF4630 PF15443.6 ORF123609 - 0.12 12.5 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4630) Choline_transpo PF04515.12 ORF123215 - 6.8e-09 35.4 0.5 7.4e-09 35.2 0.5 1.0 1 0 0 1 1 1 1 Plasma-membrane choline transporter CSG2 PF16965.5 ORF123215 - 0.086 11.8 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator Thioredoxin PF00085.20 ORF122557 - 3.2e-11 43.1 0.0 4.4e-11 42.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 ORF122557 - 0.0017 17.8 0.5 0.002 17.6 0.3 1.4 1 1 0 1 1 1 1 OST3 / OST6 family, transporter family FTR_C PF02741.15 ORF122557 - 0.012 15.7 0.0 0.015 15.4 0.0 1.1 1 0 0 1 1 1 0 FTR, proximal lobe Thioredoxin_2 PF13098.6 ORF122557 - 0.048 14.1 0.1 0.067 13.6 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF122557 - 0.062 13.6 0.1 0.1 12.9 0.1 1.3 1 0 0 1 1 1 0 Thioredoxin-like Pkinase PF00069.25 ORF121758 - 3.9e-05 23.2 0.1 5.2e-05 22.7 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Peripla_BP_2 PF01497.18 ORF121698 - 2.6e-09 37.0 0.0 3.1e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein FliD_N PF02465.18 ORF121610 - 0.0069 17.0 1.2 0.0089 16.7 1.2 1.2 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus bZIP_1 PF00170.21 ORF121610 - 0.019 15.0 6.1 0.032 14.3 6.1 1.3 1 0 0 1 1 1 0 bZIP transcription factor DivIC PF04977.15 ORF121610 - 0.11 12.2 2.0 0.17 11.7 2.0 1.3 1 0 0 1 1 1 0 Septum formation initiator EMP24_GP25L PF01105.24 ORF121610 - 0.94 9.4 3.8 1.7 8.5 3.8 1.4 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD DUF2650 PF10853.8 ORF119633 - 0.0037 16.9 2.9 0.0037 16.9 2.9 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2650) TBP-binding PF09247.11 ORF119106 - 0.086 13.1 0.1 0.16 12.2 0.1 1.4 1 0 0 1 1 1 0 TATA box-binding protein binding 14-3-3 PF00244.20 ORF118247 - 0.025 14.1 1.9 0.029 13.9 1.9 1.1 1 0 0 1 1 1 0 14-3-3 protein NAD_Gly3P_dh_N PF01210.23 ORF118247 - 0.13 12.2 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CBP_BcsG PF11658.8 ORF118190 - 7e-54 183.1 0.0 7.7e-54 183.0 0.0 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG DUF4186 PF13811.6 ORF117803 - 0.069 13.2 1.4 0.092 12.8 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) zf-C3HC4_4 PF15227.6 ORF117762 - 0.13 12.5 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING Pet191_N PF10203.9 ORF117755 - 0.08 13.3 0.1 0.35 11.2 0.0 1.9 2 0 0 2 2 2 0 Cytochrome c oxidase assembly protein PET191 DUF3328 PF11807.8 ORF116930 - 0.057 13.2 0.5 0.07 12.9 0.2 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3328) ATP-synt_8 PF00895.20 ORF116930 - 4.7 7.7 6.9 0.48 10.9 0.8 2.3 2 1 0 2 2 2 0 ATP synthase protein 8 Tudor_FRX1 PF18336.1 ORF115769 - 0.26 11.2 1.4 9.5 6.2 0.0 2.6 3 0 0 3 3 3 0 Fragile X mental retardation Tudor domain CtaG_Cox11 PF04442.14 ORF115517 - 0.094 12.7 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 DUF3328 PF11807.8 ORF115439 - 0.057 13.2 0.5 0.07 12.9 0.2 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3328) ATP-synt_8 PF00895.20 ORF115439 - 4.7 7.7 6.9 0.48 10.9 0.8 2.3 2 1 0 2 2 2 0 ATP synthase protein 8 SNARE PF05739.19 ORF1150 - 9.2e-05 22.4 1.7 0.00017 21.5 1.7 1.4 1 0 0 1 1 1 1 SNARE domain Use1 PF09753.9 ORF1150 - 0.00033 20.5 2.4 0.00045 20.0 2.4 1.2 1 0 0 1 1 1 1 Membrane fusion protein Use1 Nnf1 PF03980.14 ORF1150 - 0.026 14.9 0.8 0.046 14.1 0.8 1.5 1 1 0 1 1 1 0 Nnf1 DUF2207 PF09972.9 ORF1150 - 0.051 12.3 0.2 0.053 12.3 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5089 PF17002.5 ORF1150 - 0.12 12.3 4.8 0.2 11.5 4.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5089) GP41 PF00517.17 ORF1150 - 0.22 11.4 3.6 0.16 11.8 1.3 1.7 1 1 1 2 2 2 0 Retroviral envelope protein Membr_traf_MHD PF10540.9 ORF1150 - 0.28 11.3 4.2 0.66 10.1 2.0 2.0 2 0 0 2 2 2 0 Munc13 (mammalian uncoordinated) homology domain DUF2650 PF10853.8 ORF114631 - 0.0037 16.9 2.9 0.0037 16.9 2.9 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2650) DUF4769 PF15992.5 ORF114250 - 0.12 12.2 0.8 0.14 11.9 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) DUF4010 PF13194.6 ORF113776 - 0.0076 16.0 0.1 0.0097 15.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4010) Herpes_capsid PF06112.11 ORF109647 - 0.17 11.9 0.9 0.19 11.8 0.9 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Helicase_C_2 PF13307.6 ORF107644 - 3.7e-13 50.0 0.1 5.2e-13 49.5 0.1 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain His_Me_b4a2 PF18275.1 ORF107468 - 2.4 8.3 5.9 0.89 9.7 2.6 1.9 2 0 0 2 2 2 0 His-Me finger endonuclease beta4-alpha2 domain NSs PF11073.8 ORF107 - 0.0092 15.5 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 1 Rift valley fever virus non structural protein (NSs) like TPR_12 PF13424.6 ORF10573 - 0.002 18.4 0.1 0.0028 17.9 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat Prok-RING_4 PF14447.6 ORF105098 - 0.014 15.2 3.5 0.014 15.2 3.5 1.8 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF105098 - 1.9 8.5 10.5 0.091 12.7 4.4 2.0 3 0 0 3 3 3 0 zinc-RING finger domain Vps39_2 PF10367.9 ORF10494 - 0.085 13.3 0.0 0.098 13.1 0.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 YhzD PF14120.6 ORF104691 - 0.19 11.8 0.1 0.39 10.8 0.1 1.5 1 0 0 1 1 1 0 YhzD-like protein DUF1068 PF06364.12 ORF101003 - 0.37 10.7 2.9 0.57 10.0 2.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) NAD-GH PF10712.9 ORF100902 - 5e-28 97.9 6.8 5.8e-28 97.7 6.8 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase Arrestin_N PF00339.29 ORF100013 - 5.5e-11 42.7 0.0 6.2e-11 42.6 0.0 1.0 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain DUF3289 PF11692.8 NODE_50278_length_367_cov_1.225904_g42380_i0forward_frame_1 - 1e-24 87.6 0.1 1.1e-24 87.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3289) DUF3980 PF13140.6 NODE_50277_length_367_cov_1.361446_g42379_i0reverse_frame_1 - 0.018 15.5 0.8 0.028 14.8 0.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3980) HNOB PF07700.15 NODE_50276_length_367_cov_1.379518_g42378_i0reverse_frame_1 - 0.0036 17.3 0.6 0.0046 16.9 0.6 1.1 1 0 0 1 1 1 1 Haem-NO-binding Myosin_tail_1 PF01576.19 NODE_50276_length_367_cov_1.379518_g42378_i0forward_frame_1 - 0.0028 15.5 3.9 0.0034 15.3 3.9 1.0 1 0 0 1 1 1 1 Myosin tail TMF_DNA_bd PF12329.8 NODE_50276_length_367_cov_1.379518_g42378_i0forward_frame_1 - 0.034 14.2 11.9 0.056 13.5 11.9 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding CpXC PF14353.6 NODE_50276_length_367_cov_1.379518_g42378_i0forward_frame_1 - 0.039 14.0 0.6 0.039 14.0 0.6 1.9 1 1 1 2 2 2 0 CpXC protein KELK PF15796.5 NODE_50276_length_367_cov_1.379518_g42378_i0forward_frame_1 - 0.043 14.3 5.1 0.06 13.8 5.1 1.3 1 0 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase TMCCDC2 PF15844.5 NODE_50276_length_367_cov_1.379518_g42378_i0forward_frame_1 - 0.071 13.0 4.2 0.085 12.8 4.2 1.1 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 Spectrin PF00435.21 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.03 14.8 0.7 0.066 13.7 0.7 1.8 1 1 0 1 1 1 0 Spectrin repeat INT_SG_DDX_CT_C PF15300.6 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.093 12.5 0.0 2 8.3 0.0 2.5 3 0 0 3 3 3 0 INTS6/SAGE1/DDX26B/CT45 C-terminus Hemagglutinin PF00509.18 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.14 10.5 2.6 0.15 10.4 2.6 1.1 1 0 0 1 1 1 0 Haemagglutinin NPV_P10 PF05531.12 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.2 12.1 1.8 0.5 10.9 0.8 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DASH_Dam1 PF08653.10 NODE_50274_length_367_cov_1.409639_g42376_i0forward_frame_1 - 0.33 10.8 4.7 8.8 6.2 0.2 3.0 2 1 1 3 3 3 0 DASH complex subunit Dam1 NblA PF04485.12 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_1 - 0.3 11.5 4.1 0.56 10.6 4.1 1.4 1 0 0 1 1 1 0 Phycobilisome degradation protein nblA SpdB PF05122.13 NODE_50272_length_367_cov_1.680723_g42374_i0forward_frame_1 - 0.19 11.9 3.7 0.32 11.2 3.7 1.3 1 0 0 1 1 1 0 Mobile element transfer protein Myc_target_1 PF15179.6 NODE_50265_length_367_cov_1.915663_g42367_i0reverse_frame_1 - 0.031 14.2 2.6 0.038 13.9 2.6 1.1 1 0 0 1 1 1 0 Myc target protein 1 Phage_Nu1 PF07471.12 NODE_50265_length_367_cov_1.915663_g42367_i0reverse_frame_1 - 0.031 14.0 0.2 0.035 13.9 0.2 1.0 1 0 0 1 1 1 0 Phage DNA packaging protein Nu1 Xan_ur_permease PF00860.20 NODE_50260_length_367_cov_2.177711_g42362_i0forward_frame_1 - 1.1e-06 27.7 12.2 1.2e-06 27.4 12.2 1.0 1 0 0 1 1 1 1 Permease family Kinesin PF00225.23 NODE_50253_length_367_cov_2.481928_g42355_i0reverse_frame_1 - 0.00019 20.5 0.4 0.00021 20.3 0.4 1.4 1 1 0 1 1 1 1 Kinesin motor domain SQS_PSY PF00494.19 NODE_50247_length_367_cov_3.885542_g42349_i0forward_frame_1 - 0.042 13.3 0.2 0.044 13.3 0.2 1.1 1 0 0 1 1 1 0 Squalene/phytoene synthase TelA PF05816.11 NODE_50246_length_367_cov_5.978916_g31470_i1forward_frame_1 - 0.0036 16.4 1.2 0.004 16.3 1.2 1.3 1 0 0 1 1 1 1 Toxic anion resistance protein (TelA) DUF3323 PF11796.8 NODE_50246_length_367_cov_5.978916_g31470_i1forward_frame_1 - 0.0043 17.0 0.9 0.006 16.5 0.9 1.2 1 0 0 1 1 1 1 Protein of unknown function N-terminus (DUF3323) TT_ORF2 PF02957.15 NODE_50245_length_367_cov_9.475904_g42348_i0forward_frame_1 - 0.17 12.8 1.5 0.23 12.4 1.5 1.3 1 0 0 1 1 1 0 TT viral ORF2 SUA5 PF03481.13 NODE_50244_length_367_cov_19.355422_g42347_i0forward_frame_1 - 0.012 16.2 0.0 0.016 15.8 0.0 1.1 1 0 0 1 1 1 0 Putative GTP-binding controlling metal-binding V-ATPase_H_N PF03224.14 NODE_50243_length_367_cov_34.256024_g42346_i0reverse_frame_1 - 0.015 14.6 0.6 0.017 14.4 0.6 1.1 1 0 0 1 1 1 0 V-ATPase subunit H Proteasome PF00227.26 NODE_50233_length_367_cov_67.780120_g42336_i0forward_frame_1 - 0.015 14.8 0.0 0.02 14.4 0.0 1.2 1 0 0 1 1 1 0 Proteasome subunit Pox_A32 PF04665.12 NODE_50219_length_367_cov_92.216867_g42322_i0forward_frame_1 - 0.0074 15.8 0.4 0.0093 15.4 0.4 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein R3H PF01424.22 NODE_50216_length_367_cov_94.900602_g42319_i0reverse_frame_1 - 4.3e-07 29.8 0.0 6.7e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 R3H domain PBP1_TM PF14812.6 NODE_50216_length_367_cov_94.900602_g42319_i0reverse_frame_1 - 0.0057 17.0 6.1 0.0057 17.0 6.1 1.7 1 1 1 2 2 2 1 Transmembrane domain of transglycosylase PBP1 at N-terminal FAM176 PF14851.6 NODE_50216_length_367_cov_94.900602_g42319_i0reverse_frame_1 - 0.072 12.8 0.4 0.095 12.4 0.4 1.3 1 0 0 1 1 1 0 FAM176 family E7 PF00527.18 NODE_50216_length_367_cov_94.900602_g42319_i0reverse_frame_1 - 0.17 12.1 1.0 0.26 11.5 1.0 1.3 1 0 0 1 1 1 0 E7 protein, Early protein PhrC_PhrF PF11131.8 NODE_50215_length_367_cov_99.391566_g42318_i0reverse_frame_1 - 0.18 11.4 3.5 0.17 11.5 1.8 1.8 2 0 0 2 2 2 0 Rap-phr extracellular signalling Mcp5_PH PF12814.7 NODE_50209_length_367_cov_117.900602_g42312_i0reverse_frame_1 - 0.00098 19.2 0.6 0.0012 19.0 0.6 1.1 1 0 0 1 1 1 1 Meiotic cell cortex C-terminal pleckstrin homology DIM PF08194.12 NODE_50209_length_367_cov_117.900602_g42312_i0forward_frame_1 - 0.24 11.6 3.7 0.57 10.4 3.7 1.6 1 0 0 1 1 1 0 DIM protein Cmc1 PF08583.10 NODE_50208_length_367_cov_122.454819_g42311_i0forward_frame_1 - 0.0017 18.3 1.1 0.0017 18.3 1.1 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase biogenesis protein Cmc1 like Mgm101p PF06420.12 NODE_50208_length_367_cov_122.454819_g42311_i0forward_frame_1 - 0.012 15.2 0.0 0.012 15.2 0.0 1.5 2 0 0 2 2 2 0 Mitochondrial genome maintenance MGM101 GCK PF07802.11 NODE_50208_length_367_cov_122.454819_g42311_i0forward_frame_1 - 0.017 15.6 5.8 0.027 14.9 5.1 1.6 2 0 0 2 2 2 0 GCK domain Cadherin_tail PF15974.5 NODE_50208_length_367_cov_122.454819_g42311_i0forward_frame_1 - 0.018 15.3 1.5 0.028 14.8 1.2 1.3 1 1 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region UPF0203 PF05254.12 NODE_50208_length_367_cov_122.454819_g42311_i0forward_frame_1 - 0.27 11.5 5.3 1 9.6 0.3 2.4 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0203) CX9C PF16860.5 NODE_50208_length_367_cov_122.454819_g42311_i0forward_frame_1 - 0.98 9.5 10.4 1.3 9.1 6.6 2.4 2 1 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, COX6B PF02297.17 NODE_50208_length_367_cov_122.454819_g42311_i0forward_frame_1 - 2.7 8.3 10.3 47 4.3 10.3 2.1 1 1 0 1 1 1 0 Cytochrome oxidase c subunit VIb CHCH PF06747.13 NODE_50208_length_367_cov_122.454819_g42311_i0forward_frame_1 - 3.3 7.9 10.0 26 5.1 10.0 2.2 1 1 0 1 1 1 0 CHCH domain SLC3A2_N PF16028.5 NODE_50207_length_367_cov_134.737952_g42310_i0forward_frame_1 - 0.14 11.7 0.6 0.28 10.8 0.6 1.4 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus ABC_export PF16962.5 NODE_50200_length_367_cov_3293.250000_g36700_i3reverse_frame_1 - 0.004 15.7 2.0 0.0047 15.4 2.0 1.1 1 0 0 1 1 1 1 Putative ABC exporter VESA1_N PF12785.7 NODE_50197_length_368_cov_1.372372_g42303_i0reverse_frame_1 - 0.19 10.6 3.2 0.18 10.7 3.2 1.1 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 FMO-like PF00743.19 NODE_50195_length_368_cov_1.561562_g42301_i0reverse_frame_1 - 0.076 11.4 0.1 0.091 11.2 0.1 1.1 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Thg1 PF04446.12 NODE_50194_length_368_cov_1.612613_g42300_i0forward_frame_1 - 0.088 12.8 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 tRNAHis guanylyltransferase LRR_4 PF12799.7 NODE_50191_length_368_cov_1.795796_g42297_i0reverse_frame_1 - 0.012 16.1 4.1 2.6 8.6 0.0 3.2 2 1 1 3 3 3 0 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 NODE_50191_length_368_cov_1.795796_g42297_i0reverse_frame_1 - 0.47 10.6 2.6 6.4 7.1 0.3 3.1 3 0 0 3 3 3 0 Leucine Rich repeat LRR_1 PF00560.33 NODE_50191_length_368_cov_1.795796_g42297_i0reverse_frame_1 - 1.3 9.8 5.8 7 7.6 0.7 3.2 3 1 0 3 3 3 0 Leucine Rich Repeat COX2-transmemb PF09125.10 NODE_50189_length_368_cov_1.966967_g42295_i0forward_frame_1 - 0.14 11.9 0.3 0.14 11.9 0.3 2.0 2 1 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane Cys_rich_CPXG PF14255.6 NODE_50186_length_368_cov_2.249249_g42292_i0reverse_frame_1 - 0.01 15.7 0.2 0.019 14.9 0.2 1.4 1 0 0 1 1 1 0 Cysteine-rich CPXCG NDK PF00334.19 NODE_50184_length_368_cov_2.405405_g42290_i0reverse_frame_1 - 5.3e-05 23.2 0.0 8.9e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Nucleoside diphosphate kinase EcsC PF12787.7 NODE_50184_length_368_cov_2.405405_g42290_i0forward_frame_1 - 0.023 14.4 0.0 0.028 14.1 0.0 1.0 1 0 0 1 1 1 0 EcsC protein family DBD_Tnp_Mut PF03108.15 NODE_50176_length_368_cov_3.750751_g42282_i0reverse_frame_1 - 0.03 14.3 0.1 0.06 13.3 0.1 1.6 1 0 0 1 1 1 0 MuDR family transposase C1_4 PF07975.12 NODE_50174_length_368_cov_4.156156_g42280_i0reverse_frame_1 - 0.14 12.4 0.4 0.14 12.4 0.4 1.8 2 0 0 2 2 2 0 TFIIH C1-like domain Ig_Tie2_1 PF10430.9 NODE_50173_length_368_cov_4.324324_g42279_i0reverse_frame_1 - 0.89 10.0 4.0 2.3 8.7 0.4 2.1 1 1 1 2 2 2 0 Tie-2 Ig-like domain 1 Rubis-subs-bind PF09273.11 NODE_50168_length_368_cov_50.747748_g42274_i0reverse_frame_1 - 0.0036 18.0 0.1 0.0052 17.5 0.1 1.3 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding ERK-JNK_inhib PF15002.6 NODE_50165_length_368_cov_64.231231_g42271_i0reverse_frame_1 - 0.94 9.1 14.7 0.96 9.1 14.7 1.2 1 1 0 1 1 1 0 ERK and JNK pathways, inhibitor DUF1298 PF06974.13 NODE_50163_length_368_cov_66.477477_g42269_i0reverse_frame_1 - 3.9e-09 36.6 0.0 4.5e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Caskin1-CID PF16600.5 NODE_50152_length_368_cov_84.612613_g42258_i0reverse_frame_1 - 2.1 9.0 6.5 4.4 8.0 6.5 1.7 1 1 0 1 1 1 0 Caskin1 CASK-interaction domain Toxin_3 PF00537.18 NODE_50145_length_368_cov_90.402402_g42251_i0reverse_frame_1 - 0.035 14.3 0.1 0.063 13.5 0.1 1.4 1 0 0 1 1 1 0 Scorpion toxin-like domain DUF2735 PF10931.8 NODE_50145_length_368_cov_90.402402_g42251_i0forward_frame_1 - 0.055 14.2 0.7 0.14 12.9 0.7 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2735) Hormone_6 PF00236.18 NODE_50117_length_369_cov_1.461078_g42223_i0reverse_frame_1 - 0.011 15.7 0.2 0.019 14.9 0.2 1.3 1 0 0 1 1 1 0 Glycoprotein hormone CytochromB561_N PF09786.9 NODE_50116_length_369_cov_1.538922_g42222_i0reverse_frame_1 - 0.00042 19.4 0.1 0.00042 19.4 0.1 1.1 1 0 0 1 1 1 1 Cytochrome B561, N terminal Flu_PB2 PF00604.17 NODE_50116_length_369_cov_1.538922_g42222_i0reverse_frame_1 - 0.096 10.6 1.0 0.11 10.5 1.0 1.1 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PB2 PK PF00224.21 NODE_50115_length_369_cov_1.574850_g42221_i0reverse_frame_1 - 9.4e-11 41.2 0.2 1.1e-10 41.0 0.2 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PGP_phosphatase PF09419.10 NODE_50114_length_369_cov_1.646707_g42220_i0reverse_frame_1 - 0.098 12.3 0.1 0.13 11.9 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase Polysacc_synt_C PF14667.6 NODE_50114_length_369_cov_1.646707_g42220_i0forward_frame_1 - 0.0054 16.8 9.0 0.0068 16.5 9.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain VPS11_C PF12451.8 NODE_50113_length_369_cov_1.739521_g42219_i0forward_frame_1 - 0.14 12.4 0.0 0.41 10.9 0.0 1.8 2 0 0 2 2 2 0 Vacuolar protein sorting protein 11 C terminal SKN1 PF03935.15 NODE_50110_length_369_cov_1.847305_g42216_i0forward_frame_1 - 0.11 10.9 0.0 0.14 10.5 0.0 1.1 1 0 0 1 1 1 0 Beta-glucan synthesis-associated protein (SKN1) POT1 PF02765.17 NODE_50106_length_369_cov_2.131737_g42212_i0forward_frame_1 - 0.056 13.3 0.0 0.068 13.0 0.0 1.2 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 Thiol_cytolysin PF01289.19 NODE_50106_length_369_cov_2.131737_g42212_i0forward_frame_1 - 0.16 10.9 0.0 0.17 10.7 0.0 1.0 1 0 0 1 1 1 0 Thiol-activated cytolysin FAD_syn PF06574.12 NODE_50096_length_369_cov_2.646707_g42202_i0reverse_frame_1 - 0.00044 20.2 0.1 0.00056 19.8 0.1 1.2 1 0 0 1 1 1 1 FAD synthetase MBT PF02820.18 NODE_50096_length_369_cov_2.646707_g42202_i0forward_frame_1 - 0.084 13.2 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 mbt repeat WD40 PF00400.32 NODE_50094_length_369_cov_3.167665_g42200_i0forward_frame_1 - 0.027 15.3 0.4 0.081 13.8 0.1 1.9 2 0 0 2 2 2 0 WD domain, G-beta repeat SGL PF08450.12 NODE_50094_length_369_cov_3.167665_g42200_i0forward_frame_1 - 0.059 13.0 0.1 0.08 12.5 0.1 1.2 1 0 0 1 1 1 0 SMP-30/Gluconolactonase/LRE-like region DUF979 PF06166.12 NODE_50092_length_369_cov_3.736527_g42198_i0forward_frame_1 - 1.1 8.3 2.6 1.7 7.7 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF979) MpPF26 PF07666.11 NODE_50084_length_369_cov_51.709581_g42190_i0reverse_frame_1 - 0.00079 19.5 1.5 0.0011 19.1 1.5 1.1 1 0 0 1 1 1 1 M penetrans paralogue family 26 BORG_CEP PF14957.6 NODE_50076_length_369_cov_76.000000_g42182_i0reverse_frame_1 - 0.0063 17.7 0.0 0.0079 17.4 0.0 1.2 1 0 0 1 1 1 1 Cdc42 effector DUF2563 PF10817.8 NODE_50075_length_369_cov_76.473054_g42181_i0reverse_frame_1 - 0.038 14.6 0.0 0.049 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2563) ATP1G1_PLM_MAT8 PF02038.16 NODE_50073_length_369_cov_78.532934_g42179_i0forward_frame_1 - 0.078 12.4 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family Peptidase_C31 PF05410.13 NODE_50054_length_369_cov_445.419162_g42160_i0reverse_frame_1 - 0.12 12.5 4.1 1.3 9.1 0.4 2.2 2 0 0 2 2 2 0 Porcine arterivirus-type cysteine proteinase alpha ResB PF05140.14 NODE_50049_length_369_cov_2295.395210_g42155_i0reverse_frame_1 - 1.4 7.6 3.2 2.3 6.9 3.2 1.3 1 0 0 1 1 1 0 ResB-like family Inhibitor_Mig-6 PF11555.8 NODE_50042_length_370_cov_1.955224_g42148_i0reverse_frame_3 - 0.043 13.9 3.4 0.043 13.9 3.4 2.2 2 0 0 2 2 2 0 EGFR receptor inhibitor Mig-6 Bax1-I PF01027.20 NODE_50038_length_370_cov_2.110448_g42144_i0reverse_frame_2 - 3.2e-17 63.0 1.6 4.7e-17 62.5 1.6 1.3 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 EcoR124_C PF12008.8 NODE_50032_length_370_cov_2.295522_g42138_i0reverse_frame_2 - 0.022 14.4 0.7 0.046 13.4 0.5 1.6 2 0 0 2 2 2 0 Type I restriction and modification enzyme - subunit R C terminal DUF3854 PF12965.7 NODE_50032_length_370_cov_2.295522_g42138_i0reverse_frame_2 - 0.039 13.9 0.1 0.045 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) TypeIII_RM_meth PF12564.8 NODE_50027_length_370_cov_2.537313_g42133_i0forward_frame_2 - 0.0017 18.5 1.1 0.0031 17.6 1.1 1.5 1 0 0 1 1 1 1 Type III restriction/modification enzyme methylation subunit VSP PF03302.13 NODE_50023_length_370_cov_2.716418_g42129_i0forward_frame_3 - 0.036 12.9 28.2 1.2 7.9 13.9 2.6 1 1 1 2 2 2 0 Giardia variant-specific surface protein HNH_repeat PF18780.1 NODE_50022_length_370_cov_2.749254_g42128_i0forward_frame_2 - 0.47 10.3 0.3 0.47 10.3 0.3 1.7 2 0 0 2 2 2 0 Homing endonuclease repeat AAA_5 PF07728.14 NODE_50021_length_370_cov_2.829851_g42127_i0forward_frame_3 - 1.1e-16 61.1 0.0 1.4e-16 60.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 NODE_50021_length_370_cov_2.829851_g42127_i0forward_frame_3 - 0.011 15.7 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RCC1 PF00415.18 NODE_50017_length_370_cov_3.295522_g42123_i0forward_frame_2 - 2.9e-06 27.8 0.1 0.063 13.9 0.0 2.6 2 1 1 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_50017_length_370_cov_3.295522_g42123_i0forward_frame_2 - 0.00066 19.4 0.0 0.0012 18.6 0.0 1.4 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Na_Ca_ex PF01699.24 NODE_50016_length_370_cov_3.355224_g42122_i0reverse_frame_2 - 4.4e-10 39.7 3.8 6.2e-10 39.2 3.2 1.5 1 1 1 2 2 2 2 Sodium/calcium exchanger protein HisKA_7TM PF16927.5 NODE_50016_length_370_cov_3.355224_g42122_i0reverse_frame_2 - 0.012 15.6 1.3 0.02 14.9 1.3 1.3 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase MNNL PF07657.13 NODE_50011_length_370_cov_3.880597_g42117_i0forward_frame_2 - 0.097 12.7 0.7 0.097 12.7 0.7 2.0 2 0 0 2 2 2 0 N terminus of Notch ligand Bee_toxin PF17454.2 NODE_50009_length_370_cov_4.558209_g42115_i0forward_frame_3 - 4.1 7.5 11.5 0.16 12.0 4.4 2.3 2 1 0 2 2 2 0 Honey bee toxin DUF4017 PF13209.6 NODE_50009_length_370_cov_4.558209_g42115_i0forward_frame_2 - 0.12 12.3 0.4 0.12 12.3 0.4 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF4017) DUF1943 PF09172.11 NODE_50003_length_370_cov_52.940299_g42109_i0reverse_frame_2 - 1.1 8.4 3.9 1 8.6 3.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) CDC45 PF02724.14 NODE_50003_length_370_cov_52.940299_g42109_i0reverse_frame_2 - 1.7 6.8 8.9 1.8 6.7 8.9 1.0 1 0 0 1 1 1 0 CDC45-like protein Rubredoxin_2 PF18073.1 NODE_50003_length_370_cov_52.940299_g42109_i0forward_frame_3 - 1.4 8.7 6.6 0.83 9.4 1.8 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain Metallophos_2 PF12850.7 NODE_49998_length_370_cov_70.591045_g42104_i0reverse_frame_3 - 0.13 12.4 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Nodulin_late PF07127.11 NODE_49994_length_370_cov_88.095522_g42100_i0reverse_frame_3 - 0.054 13.8 1.3 0.054 13.8 1.3 2.5 2 1 0 2 2 2 0 Late nodulin protein AAA_32 PF13654.6 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.0012 17.7 6.7 0.0014 17.5 6.7 1.0 1 0 0 1 1 1 1 AAA domain F_actin_cap_B PF01115.17 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.034 13.8 0.4 0.034 13.8 0.4 1.6 2 0 0 2 2 2 0 F-actin capping protein, beta subunit FRP PF18032.1 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.076 13.6 2.2 8.9 7.0 0.2 2.2 1 1 0 2 2 2 0 Photoprotection regulator fluorescence recovery protein ATPase_2 PF01637.18 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.079 12.9 2.1 0.093 12.6 2.1 1.0 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DUF4085 PF13315.6 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.14 11.8 4.1 0.29 10.7 4.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4085) Tho2 PF11262.8 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.14 11.4 5.2 0.17 11.1 5.2 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF4239 PF14023.6 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.14 11.8 0.7 0.16 11.7 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) zf-CRD PF17979.1 NODE_49994_length_370_cov_88.095522_g42100_i0forward_frame_3 - 0.17 12.0 1.9 0.25 11.4 1.9 1.5 1 1 0 1 1 1 0 Cysteine rich domain with multizinc binding regions Zn_clus PF00172.18 NODE_49986_length_370_cov_119.265672_g42092_i0forward_frame_2 - 0.066 13.3 2.4 0.15 12.2 2.3 1.7 1 1 0 1 1 1 0 Fungal Zn(2)-Cys(6) binuclear cluster domain MTBP_mid PF14919.6 NODE_49982_length_370_cov_148.776119_g42088_i0reverse_frame_3 - 0.034 13.4 0.3 0.043 13.0 0.3 1.1 1 0 0 1 1 1 0 MDM2-binding DUF2448 PF10476.9 NODE_49965_length_371_cov_0.922619_g42071_i0reverse_frame_2 - 0.05 13.5 0.5 0.073 12.9 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2448) Mei4 PF13971.6 NODE_49965_length_371_cov_0.922619_g42071_i0forward_frame_3 - 0.0074 15.8 0.8 0.0074 15.8 0.8 1.1 1 0 0 1 1 1 1 Meiosis-specific protein Mei4 DUF2569 PF10754.9 NODE_49965_length_371_cov_0.922619_g42071_i0forward_frame_3 - 0.045 14.2 0.1 0.066 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) MFAP1 PF06991.11 NODE_49964_length_371_cov_1.318452_g42070_i0forward_frame_2 - 0.0059 16.5 5.4 0.007 16.2 5.4 1.0 1 0 0 1 1 1 1 Microfibril-associated/Pre-mRNA processing Eapp_C PF10238.9 NODE_49964_length_371_cov_1.318452_g42070_i0forward_frame_2 - 0.0074 16.4 1.0 0.0085 16.2 1.0 1.1 1 0 0 1 1 1 1 E2F-associated phosphoprotein DSL PF01414.19 NODE_49963_length_371_cov_1.565476_g42069_i0forward_frame_2 - 0.026 14.8 0.2 0.041 14.2 0.2 1.3 1 0 0 1 1 1 0 Delta serrate ligand PLATZ PF04640.14 NODE_49962_length_371_cov_1.592262_g42068_i0reverse_frame_3 - 3.7 8.2 10.4 0.45 11.2 1.8 2.2 2 0 0 2 2 2 0 PLATZ transcription factor Sid-5 PF17204.3 NODE_49962_length_371_cov_1.592262_g42068_i0forward_frame_3 - 0.14 12.4 0.3 0.14 12.4 0.3 2.0 2 0 0 2 2 2 0 Sid-5 family ASC PF00858.24 NODE_49958_length_371_cov_1.898810_g42064_i0reverse_frame_2 - 0.16 10.9 0.2 0.19 10.7 0.2 1.0 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel Ald_deCOase PF11266.8 NODE_49956_length_371_cov_2.104167_g42062_i0forward_frame_2 - 0.04 13.6 0.2 0.055 13.2 0.2 1.1 1 0 0 1 1 1 0 Long-chain fatty aldehyde decarbonylase zf-Tim10_DDP PF02953.15 NODE_49954_length_371_cov_2.166667_g42060_i0forward_frame_3 - 0.068 12.8 0.7 0.1 12.3 0.1 1.5 2 0 0 2 2 2 0 Tim10/DDP family zinc finger DegT_DnrJ_EryC1 PF01041.17 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 3.2e-43 148.4 0.0 3.7e-43 148.2 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SHMT PF00464.19 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 0.01 14.5 0.0 0.011 14.4 0.0 1.0 1 0 0 1 1 1 0 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 0.058 12.7 0.0 0.12 11.7 0.0 1.6 1 1 0 1 1 1 0 Beta-eliminating lyase SelA PF03841.13 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 0.12 11.3 0.0 0.14 11.1 0.0 1.3 1 0 0 1 1 1 0 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.19 NODE_49953_length_371_cov_2.255952_g42059_i0forward_frame_3 - 0.17 10.8 0.0 0.23 10.4 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-V DUF4705 PF15788.5 NODE_49952_length_371_cov_2.261905_g42058_i0forward_frame_3 - 0.04 14.1 3.4 0.085 13.1 3.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4705) DUF1418 PF07214.12 NODE_49952_length_371_cov_2.261905_g42058_i0forward_frame_2 - 1.1 9.2 5.1 41 4.1 5.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1418) Ycf70 PF17382.2 NODE_49948_length_371_cov_2.544643_g42055_i0reverse_frame_2 - 0.06 13.8 0.3 0.085 13.3 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Ilm1 PF10311.9 NODE_49946_length_371_cov_2.627976_g42053_i0forward_frame_2 - 0.055 13.1 0.7 0.07 12.8 0.7 1.1 1 0 0 1 1 1 0 Increased loss of mitochondrial DNA protein 1 GAF_2 PF13185.6 NODE_49943_length_371_cov_2.654762_g42050_i0reverse_frame_2 - 1.5e-07 31.8 0.0 1.5e-07 31.8 0.0 1.0 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 NODE_49943_length_371_cov_2.654762_g42050_i0reverse_frame_2 - 1.2e-06 29.2 0.0 1.2e-06 29.2 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 NODE_49943_length_371_cov_2.654762_g42050_i0reverse_frame_2 - 1e-05 25.9 0.0 1.1e-05 25.7 0.0 1.1 1 0 0 1 1 1 1 GAF domain Autoind_bind PF03472.15 NODE_49943_length_371_cov_2.654762_g42050_i0reverse_frame_2 - 0.00036 20.0 0.0 0.00044 19.7 0.0 1.3 1 1 0 1 1 1 1 Autoinducer binding domain Xol-1_N PF09108.10 NODE_49942_length_371_cov_2.681548_g42049_i0forward_frame_2 - 0.08 12.8 0.6 0.097 12.5 0.6 1.1 1 0 0 1 1 1 0 Switch protein XOL-1, N-terminal RHS PF03527.14 NODE_49938_length_371_cov_2.782738_g42045_i0reverse_frame_2 - 0.00062 19.5 0.1 0.0011 18.7 0.1 1.4 1 0 0 1 1 1 1 RHS protein rve PF00665.26 NODE_49937_length_371_cov_2.791667_g42044_i0reverse_frame_3 - 0.018 15.2 0.0 0.027 14.7 0.0 1.3 1 0 0 1 1 1 0 Integrase core domain UvrB PF12344.8 NODE_49937_length_371_cov_2.791667_g42044_i0reverse_frame_3 - 0.13 12.2 0.2 7.3 6.5 0.0 2.8 3 0 0 3 3 3 0 Ultra-violet resistance protein B MOR2-PAG1_C PF14225.6 NODE_49936_length_371_cov_2.875000_g42043_i0forward_frame_3 - 0.036 13.9 0.3 0.044 13.7 0.3 1.1 1 0 0 1 1 1 0 Cell morphogenesis C-terminal FYVE_2 PF02318.16 NODE_49936_length_371_cov_2.875000_g42043_i0forward_frame_3 - 1.3 9.3 8.2 0.99 9.6 5.1 2.0 2 0 0 2 2 2 0 FYVE-type zinc finger Bac_DnaA PF00308.18 NODE_49935_length_371_cov_2.892857_g42042_i0reverse_frame_3 - 0.043 13.7 0.0 0.056 13.3 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein Mg296 PF09644.10 NODE_49928_length_371_cov_19.824405_g42035_i0reverse_frame_3 - 0.19 11.8 0.4 0.19 11.8 0.4 1.9 2 0 0 2 2 2 0 Mg296 protein Arf PF00025.21 NODE_49927_length_371_cov_19.919643_g42034_i0reverse_frame_3 - 1.3e-10 41.0 0.0 1.6e-10 40.7 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 NODE_49927_length_371_cov_19.919643_g42034_i0reverse_frame_3 - 0.0028 17.3 0.0 0.0033 17.0 0.0 1.1 1 0 0 1 1 1 1 Ras family AGS_C PF18134.1 NODE_49924_length_371_cov_36.815476_g42031_i0reverse_frame_2 - 0.011 15.8 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain PIN PF01850.21 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_3 - 0.051 14.1 0.2 0.067 13.7 0.2 1.2 1 0 0 1 1 1 0 PIN domain DUF4781 PF16013.5 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.048 12.5 1.4 0.062 12.1 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) DUF3918 PF13056.6 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.33 10.6 5.5 1.8 8.3 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) DUF5516 PF17637.2 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.33 10.7 5.9 1.3 8.8 3.7 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF5516) HemX PF04375.14 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.74 9.0 2.3 0.46 9.7 0.1 1.6 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase TcdA_TcdB_pore PF12920.7 NODE_49923_length_371_cov_38.627976_g42030_i0reverse_frame_2 - 0.74 8.0 2.1 0.78 7.9 2.1 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain OAD_gamma PF04277.13 NODE_49923_length_371_cov_38.627976_g42030_i0forward_frame_3 - 0.065 13.8 0.2 0.089 13.4 0.2 1.1 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Herpes_UL73 PF03554.13 NODE_49923_length_371_cov_38.627976_g42030_i0forward_frame_2 - 2.4 8.2 10.5 0.065 13.2 2.4 2.1 1 1 0 2 2 2 0 UL73 viral envelope glycoprotein E1-E2_ATPase PF00122.20 NODE_49921_length_371_cov_43.142857_g42028_i0reverse_frame_2 - 0.022 14.3 0.5 0.035 13.6 0.5 1.4 1 0 0 1 1 1 0 E1-E2 ATPase Atrophin-1 PF03154.15 NODE_49921_length_371_cov_43.142857_g42028_i0forward_frame_2 - 1 7.6 7.8 1.1 7.4 7.8 1.1 1 0 0 1 1 1 0 Atrophin-1 family Mannosyl_trans4 PF15971.5 NODE_49918_length_371_cov_53.235119_g42025_i0forward_frame_3 - 0.18 11.6 0.9 1.5 8.6 0.0 2.0 1 1 1 2 2 2 0 DolP-mannose mannosyltransferase DUF1768 PF08719.11 NODE_49915_length_371_cov_69.205357_g42022_i0reverse_frame_3 - 1.7e-08 34.9 1.6 4e-08 33.6 1.6 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF1768) DUF5110 PF17137.4 NODE_49911_length_371_cov_74.000000_g42018_i0reverse_frame_2 - 2.8e-05 24.3 0.1 4.4e-05 23.7 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) OST3_OST6 PF04756.13 NODE_49909_length_371_cov_74.297619_g42016_i0reverse_frame_3 - 0.034 13.5 0.3 5 6.4 0.1 2.1 2 0 0 2 2 2 0 OST3 / OST6 family, transporter family Methyltransf_29 PF03141.16 NODE_49909_length_371_cov_74.297619_g42016_i0reverse_frame_2 - 0.14 10.7 0.3 3.1 6.2 0.0 2.0 1 1 1 2 2 2 0 Putative S-adenosyl-L-methionine-dependent methyltransferase RCC1_2 PF13540.6 NODE_49909_length_371_cov_74.297619_g42016_i0reverse_frame_2 - 0.19 11.6 0.3 0.19 11.6 0.3 2.6 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat Pro_CA PF00484.19 NODE_49909_length_371_cov_74.297619_g42016_i0reverse_frame_2 - 0.19 12.0 1.3 12 6.2 0.1 2.4 1 1 1 2 2 2 0 Carbonic anhydrase DUF4423 PF14394.6 NODE_49908_length_371_cov_75.250000_g42015_i0reverse_frame_2 - 0.022 14.5 0.2 0.038 13.7 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) Phage_int_SAM_5 PF13102.6 NODE_49908_length_371_cov_75.250000_g42015_i0reverse_frame_2 - 0.1 12.9 3.6 0.19 12.1 0.5 2.3 1 1 1 2 2 2 0 Phage integrase SAM-like domain PPR_2 PF13041.6 NODE_49907_length_371_cov_75.675595_g42014_i0reverse_frame_3 - 0.11 12.7 0.0 0.22 11.8 0.0 1.5 1 0 0 1 1 1 0 PPR repeat family HTH_20 PF12840.7 NODE_49907_length_371_cov_75.675595_g42014_i0forward_frame_2 - 0.66 10.1 2.9 0.42 10.7 0.3 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Pkinase PF00069.25 NODE_49904_length_371_cov_78.589286_g42011_i0forward_frame_3 - 1.8e-24 86.5 0.4 2.1e-24 86.3 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49904_length_371_cov_78.589286_g42011_i0forward_frame_3 - 7.8e-16 58.1 0.1 8.8e-16 58.0 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 NODE_49904_length_371_cov_78.589286_g42011_i0forward_frame_3 - 0.027 14.1 0.2 0.034 13.8 0.2 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 HCNGP PF07818.13 NODE_49902_length_371_cov_80.502976_g42009_i0reverse_frame_3 - 6.8e-09 36.3 0.0 1.1e-08 35.7 0.0 1.3 1 0 0 1 1 1 1 HCNGP-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks213.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks213.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks213.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks213.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:07:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CART PF06373.11 NODE_49896_length_371_cov_123.764881_g42003_i0forward_frame_3 - 0.079 13.2 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) DUF3137 PF11335.8 NODE_49895_length_371_cov_130.809524_g42002_i0reverse_frame_2 - 0.27 11.2 5.6 0.59 10.1 1.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3137) Oxidored_q2 PF00420.24 NODE_49895_length_371_cov_130.809524_g42002_i0forward_frame_2 - 0.043 13.4 0.2 0.061 13.0 0.2 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF3762 PF12591.8 NODE_49892_length_371_cov_162.883929_g41999_i0forward_frame_3 - 0.12 12.6 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3762) DUF630 PF04783.12 NODE_49890_length_371_cov_198.755952_g41997_i0reverse_frame_3 - 0.064 13.4 3.5 0.32 11.2 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF630) TPR_17 PF13431.6 NODE_49890_length_371_cov_198.755952_g41997_i0reverse_frame_2 - 9.1e-10 38.2 0.6 0.031 14.6 0.1 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_49890_length_371_cov_198.755952_g41997_i0reverse_frame_2 - 9.6e-05 22.0 1.7 0.006 16.2 0.1 2.9 3 0 0 3 3 3 2 TPR repeat TPR_1 PF00515.28 NODE_49890_length_371_cov_198.755952_g41997_i0reverse_frame_2 - 0.018 14.8 5.0 5.9 6.9 0.1 4.8 5 0 0 5 5 5 0 Tetratricopeptide repeat MTABC_N PF16185.5 NODE_49890_length_371_cov_198.755952_g41997_i0forward_frame_2 - 0.03 13.8 0.8 0.037 13.5 0.8 1.1 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region Gly_rich_SFCGS PF14272.6 NODE_49885_length_371_cov_284.779762_g41992_i0reverse_frame_3 - 0.18 11.9 1.3 0.37 10.8 0.1 1.8 1 1 1 2 2 2 0 Glycine-rich SFCGS ADIP PF11559.8 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 0.031 14.4 5.2 0.035 14.2 5.2 1.2 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding FlxA PF14282.6 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 0.23 11.5 19.0 4.9 7.2 19.0 2.1 1 1 0 1 1 1 0 FlxA-like protein DUF2968 PF11180.8 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 2.9 7.5 17.0 37 3.9 16.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2968) Swi5 PF07061.11 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 4 7.6 6.1 5.9 7.0 1.6 2.1 1 1 1 2 2 2 0 Swi5 DUF4763 PF15960.5 NODE_49884_length_371_cov_308.931548_g41991_i0forward_frame_2 - 6.9 5.9 19.8 13 5.0 19.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4763) Peptidase_M17 PF00883.21 NODE_49882_length_371_cov_371.089286_g41989_i0forward_frame_2 - 2.3e-18 66.5 0.0 2.6e-18 66.4 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain ART PF01129.18 NODE_49880_length_371_cov_407.059524_g41987_i0reverse_frame_3 - 0.0015 17.8 0.0 0.0024 17.2 0.0 1.3 1 1 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 NODE_49880_length_371_cov_407.059524_g41987_i0reverse_frame_3 - 0.095 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosyltransferase exoenzyme DUF5542 PF17696.1 NODE_49880_length_371_cov_407.059524_g41987_i0reverse_frame_2 - 0.044 13.9 1.1 0.1 12.7 1.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5542) Cu-oxidase_4 PF02578.15 NODE_49879_length_371_cov_591.491071_g41986_i0reverse_frame_3 - 0.086 12.4 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Multi-copper polyphenol oxidoreductase laccase GATase1_like PF07090.11 NODE_49878_length_371_cov_966.500000_g41985_i0reverse_frame_3 - 0.084 12.3 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Putative glutamine amidotransferase zf-met PF12874.7 NODE_49876_length_371_cov_16224.666667_g41983_i0forward_frame_2 - 1.5 9.3 5.2 11 6.5 0.2 2.7 3 0 0 3 3 3 0 Zinc-finger of C2H2 type Ion_trans PF00520.31 NODE_49875_length_372_cov_1.183976_g41982_i0reverse_frame_3 - 1.3e-11 44.2 8.0 4.3e-08 32.7 2.9 2.1 2 0 0 2 2 2 2 Ion transport protein PLAC PF08686.11 NODE_49873_length_372_cov_1.400593_g41980_i0forward_frame_2 - 5.5 7.8 8.2 1.3 9.8 4.7 1.8 2 0 0 2 2 2 0 PLAC (protease and lacunin) domain Pkinase PF00069.25 NODE_49872_length_372_cov_1.424332_g41979_i0forward_frame_3 - 2.3e-15 56.7 0.0 2.9e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_49872_length_372_cov_1.424332_g41979_i0forward_frame_3 - 2e-08 33.9 0.0 2.4e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DCX PF03607.17 NODE_49872_length_372_cov_1.424332_g41979_i0forward_frame_3 - 0.057 13.5 0.1 0.12 12.5 0.1 1.5 1 0 0 1 1 1 0 Doublecortin DUF4560 PF15118.6 NODE_49867_length_372_cov_1.804154_g41974_i0reverse_frame_3 - 0.042 13.7 0.1 0.089 12.7 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4560) Topoisom_bac PF01131.20 NODE_49867_length_372_cov_1.804154_g41974_i0forward_frame_3 - 6.2e-16 58.4 0.0 6.7e-16 58.3 0.0 1.0 1 0 0 1 1 1 1 DNA topoisomerase TFIIA PF03153.13 NODE_49863_length_372_cov_2.151335_g41970_i0reverse_frame_3 - 5.3 6.9 10.5 5.8 6.8 10.5 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit AMNp_N PF10423.9 NODE_49861_length_372_cov_2.225519_g41968_i0reverse_frame_2 - 5.6e-10 39.1 0.0 7.5e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Bacterial AMP nucleoside phosphorylase N-terminus Ig_4 PF16680.5 NODE_49861_length_372_cov_2.225519_g41968_i0reverse_frame_2 - 0.038 14.3 0.6 0.067 13.5 0.6 1.4 1 0 0 1 1 1 0 T-cell surface glycoprotein CD3 delta chain DUF2680 PF10925.8 NODE_49861_length_372_cov_2.225519_g41968_i0reverse_frame_2 - 0.2 11.7 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2680) zf-3CxxC PF13695.6 NODE_49857_length_372_cov_2.314540_g41964_i0reverse_frame_3 - 0.0018 18.7 2.1 0.0026 18.2 0.1 1.9 1 1 1 2 2 2 1 Zinc-binding domain MFS_1 PF07690.16 NODE_49857_length_372_cov_2.314540_g41964_i0forward_frame_2 - 3.2e-08 32.9 0.5 3.7e-08 32.7 0.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily BT1 PF03092.16 NODE_49857_length_372_cov_2.314540_g41964_i0forward_frame_2 - 0.0027 16.0 0.0 0.003 15.9 0.0 1.0 1 0 0 1 1 1 1 BT1 family CstA PF02554.14 NODE_49857_length_372_cov_2.314540_g41964_i0forward_frame_2 - 0.068 12.1 0.0 0.082 11.8 0.0 1.1 1 0 0 1 1 1 0 Carbon starvation protein CstA KIND PF16474.5 NODE_49856_length_372_cov_2.326409_g41963_i0forward_frame_3 - 0.037 13.9 0.0 0.046 13.6 0.0 1.0 1 0 0 1 1 1 0 Kinase non-catalytic C-lobe domain zf-LYAR PF08790.11 NODE_49856_length_372_cov_2.326409_g41963_i0forward_frame_3 - 0.39 10.6 5.1 5.4 7.0 0.0 2.8 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger zf-H2C2_2 PF13465.6 NODE_49855_length_372_cov_2.335312_g41962_i0reverse_frame_3 - 0.19 12.2 2.3 2.4 8.8 0.5 2.3 2 0 0 2 2 2 0 Zinc-finger double domain Vg_Tdu PF07545.14 NODE_49848_length_372_cov_3.041543_g41955_i0forward_frame_3 - 0.23 11.3 2.6 12 5.7 0.1 2.3 2 0 0 2 2 2 0 Vestigial/Tondu family Caerin_1 PF07440.12 NODE_49848_length_372_cov_3.041543_g41955_i0forward_frame_2 - 4.5 7.4 6.7 17 5.6 0.5 2.3 2 0 0 2 2 2 0 Caerin 1 protein HdeA PF06411.11 NODE_49846_length_372_cov_3.219585_g41953_i0reverse_frame_2 - 7.5e-19 67.7 0.3 1.1e-18 67.2 0.3 1.3 1 0 0 1 1 1 1 HdeA/HdeB family IGF2_C PF08365.11 NODE_49844_length_372_cov_3.317507_g41951_i0reverse_frame_3 - 0.061 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide DUF2534 PF10749.9 NODE_49841_length_372_cov_4.551929_g41948_i0reverse_frame_3 - 6.6e-22 77.5 2.5 8.6e-22 77.1 2.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2534) TRADD_N PF09034.10 NODE_49841_length_372_cov_4.551929_g41948_i0forward_frame_2 - 0.016 15.2 0.3 0.025 14.6 0.3 1.2 1 0 0 1 1 1 0 TRADD, N-terminal domain Flexi_CP PF00286.20 NODE_49841_length_372_cov_4.551929_g41948_i0forward_frame_2 - 0.031 14.2 0.4 0.057 13.3 0.2 1.5 1 1 1 2 2 2 0 Viral coat protein YqgB PF11036.8 NODE_49838_length_372_cov_5.421365_g41945_i0reverse_frame_2 - 0.11 12.3 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 Virulence promoting factor Fig1 PF12351.8 NODE_49835_length_372_cov_40.551929_g41942_i0reverse_frame_2 - 0.014 15.3 0.5 0.017 15.1 0.5 1.1 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 DUF5316 PF17247.2 NODE_49835_length_372_cov_40.551929_g41942_i0reverse_frame_2 - 0.075 13.1 0.2 0.075 13.1 0.2 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5316) ExbD PF02472.16 NODE_49835_length_372_cov_40.551929_g41942_i0reverse_frame_2 - 0.4 10.9 5.3 0.43 10.7 4.5 1.5 1 1 0 1 1 1 0 Biopolymer transport protein ExbD/TolR F-box-like PF12937.7 NODE_49827_length_372_cov_76.691395_g41934_i0forward_frame_3 - 0.049 13.5 6.7 0.68 9.9 0.6 2.9 2 1 0 2 2 2 0 F-box-like F-box PF00646.33 NODE_49827_length_372_cov_76.691395_g41934_i0forward_frame_3 - 8.1 6.5 8.7 0.62 10.0 0.8 2.4 2 0 0 2 2 2 0 F-box domain DUF3331 PF11811.8 NODE_49820_length_372_cov_95.958457_g41927_i0reverse_frame_2 - 0.0062 16.4 0.7 0.018 14.9 0.2 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF3331) STAS PF01740.21 NODE_49817_length_372_cov_120.510386_g41924_i0reverse_frame_3 - 7.3e-09 35.3 0.0 9.9e-09 34.9 0.0 1.2 1 0 0 1 1 1 1 STAS domain Toxin_11 PF07473.11 NODE_49813_length_372_cov_171.664688_g41920_i0reverse_frame_2 - 2.3 8.4 7.8 0.39 10.8 3.7 1.9 2 0 0 2 2 2 0 Spasmodic peptide gm9a; conotoxin from Conus species Radial_spoke_3 PF06098.11 NODE_49812_length_372_cov_173.127596_g41919_i0reverse_frame_2 - 0.11 11.8 2.5 0.15 11.3 2.5 1.1 1 0 0 1 1 1 0 Radial spoke protein 3 EMC3_TMCO1 PF01956.16 NODE_49812_length_372_cov_173.127596_g41919_i0reverse_frame_2 - 0.16 11.7 0.2 8.6 6.1 0.0 2.1 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Tetraspanin PF00335.20 NODE_49811_length_372_cov_210.373887_g41918_i0reverse_frame_3 - 0.07 12.8 0.1 0.1 12.3 0.1 1.2 1 0 0 1 1 1 0 Tetraspanin family Dmrt1 PF12374.8 NODE_49809_length_372_cov_256.670623_g41916_i0forward_frame_3 - 0.02 15.3 0.6 0.049 14.1 0.2 1.8 2 0 0 2 2 2 0 Double-sex mab3 related transcription factor 1 Ribosomal_L14 PF00238.19 NODE_49807_length_372_cov_318.575668_g41914_i0reverse_frame_3 - 1.3e-14 54.3 0.0 1.8e-14 53.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e SH3_1 PF00018.28 NODE_49807_length_372_cov_318.575668_g41914_i0reverse_frame_3 - 0.13 11.9 0.2 0.32 10.6 0.1 1.7 2 0 0 2 2 2 0 SH3 domain FSH1 PF03959.13 ORF99911 - 0.006 16.3 0.1 0.024 14.3 0.0 1.7 1 1 1 2 2 2 1 Serine hydrolase (FSH1) CLN3 PF02487.17 ORF97857 - 5e-12 45.6 7.5 5.3e-12 45.5 7.5 1.0 1 0 0 1 1 1 1 CLN3 protein Phage_holin_3_6 PF07332.11 ORF97857 - 0.031 14.3 1.8 0.052 13.6 1.8 1.4 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III ASFV_L11L PF05293.11 ORF97857 - 0.83 10.0 10.6 2.8 8.4 10.6 2.0 1 1 0 1 1 1 0 African swine fever virus (ASFV) L11L protein E6 PF00518.17 ORF96372 - 0.035 14.5 0.4 0.083 13.3 0.4 1.6 1 1 1 2 2 2 0 Early Protein (E6) DUF2569 PF10754.9 ORF96290 - 0.0032 17.9 1.0 0.0045 17.4 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2569) 7tm_2 PF00002.24 ORF96290 - 0.0047 16.3 1.0 0.006 15.9 1.0 1.1 1 0 0 1 1 1 1 7 transmembrane receptor (Secretin family) Frizzled PF01534.17 ORF96290 - 0.021 13.9 0.8 0.026 13.6 0.8 1.1 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region SVIP PF15811.5 ORF96014 - 0.0014 19.0 1.0 0.0027 18.1 1.0 1.5 1 0 0 1 1 1 1 Small VCP/p97-interacting protein SIMPL PF04402.14 ORF96014 - 0.012 16.1 0.1 0.012 16.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF541) DUF3636 PF12331.8 ORF95355 - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3636) Hydantoinase_A PF01968.18 ORF93654 - 0.095 11.9 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase DUF1707 PF08044.11 ORF91349 - 0.021 14.9 0.1 0.036 14.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1707) DUF1090 PF06476.12 ORF91349 - 0.89 9.7 7.5 0.73 10.0 5.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1090) 2TM PF13239.6 ORF88392 - 0.17 12.2 1.3 0.26 11.6 1.3 1.4 1 0 0 1 1 1 0 2TM domain HHH_2 PF12826.7 ORF88186 - 0.09 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif Spore_III_AB PF09548.10 ORF88186 - 0.4 10.8 2.8 0.54 10.4 2.8 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) Methyltransf_11 PF08241.12 ORF88028 - 2.3e-06 28.2 0.0 3.1e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF88028 - 1.6e-05 25.5 0.0 2.5e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF88028 - 3e-05 23.8 0.0 3.3e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF88028 - 4.3e-05 23.4 0.0 0.00012 22.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF88028 - 0.0025 18.5 0.0 0.0035 18.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain DUF1378 PF07125.11 ORF87513 - 0.074 13.2 0.2 0.17 12.1 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1378) DUF4017 PF13209.6 ORF86127 - 0.034 14.1 0.6 0.056 13.4 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4017) Periviscerokin PF08259.11 ORF85518 - 1 9.8 5.3 3.2 8.3 1.6 2.6 2 0 0 2 2 2 0 Periviscerokinin family FAM176 PF14851.6 ORF84824 - 0.16 11.7 3.5 0.19 11.4 3.5 1.2 1 0 0 1 1 1 0 FAM176 family EMP24_GP25L PF01105.24 ORF83138 - 5e-09 36.4 0.0 5.7e-09 36.2 0.0 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Tox-SGS PF15651.6 ORF83138 - 0.12 12.6 0.2 0.24 11.7 0.2 1.5 1 1 0 1 1 1 0 Salivary glad secreted protein domain toxin Rieske PF00355.26 ORF83093 - 1.2e-17 63.7 0.0 1.4e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF83093 - 1.1e-11 44.6 0.0 1.4e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain HTH_17 PF12728.7 ORF82635 - 6.9e-09 35.8 0.1 4.3e-08 33.2 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF82635 - 0.013 15.3 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_29 PF13551.6 ORF82635 - 0.025 14.6 0.3 0.065 13.3 0.0 1.8 2 0 0 2 2 2 0 Winged helix-turn helix Rotamase_2 PF13145.6 ORF82278 - 1.7 9.5 10.4 3.2 8.6 10.4 1.6 1 1 0 1 1 1 0 PPIC-type PPIASE domain Ion_trans PF00520.31 ORF81568 - 0.031 13.5 0.1 0.039 13.2 0.1 1.1 1 0 0 1 1 1 0 Ion transport protein EMC1_C PF07774.13 ORF81568 - 0.054 13.2 0.1 0.14 11.9 0.0 1.6 1 1 0 2 2 2 0 ER membrane protein complex subunit 1, C-terminal Shisa PF13908.6 ORF80736 - 0.0018 18.6 0.7 0.0021 18.3 0.7 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator MLANA PF14991.6 ORF80736 - 0.025 14.9 0.7 0.035 14.4 0.7 1.4 1 1 0 1 1 1 0 Protein melan-A DUF3139 PF11337.8 ORF80736 - 0.039 14.6 0.0 0.059 14.0 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) HCO3_cotransp PF00955.21 ORF80736 - 0.2 10.4 1.0 0.24 10.2 1.0 1.0 1 0 0 1 1 1 0 HCO3- transporter family O-antigen_lig PF13425.6 ORF80736 - 0.84 8.4 2.6 0.92 8.2 2.6 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Nucleoside_tran PF01733.18 ORF80736 - 4.1 6.7 3.9 6.8 6.0 3.9 1.5 1 1 0 1 1 1 0 Nucleoside transporter ABC_tran PF00005.27 ORF80379 - 0.0016 19.0 0.0 0.0029 18.1 0.0 1.4 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF80379 - 0.0035 17.2 0.0 0.0051 16.7 0.0 1.3 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF80379 - 0.023 14.1 0.0 0.024 14.1 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain DUF4969 PF16339.5 ORF79455 - 0.19 12.1 0.1 0.31 11.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4969) DUF1836 PF08876.11 ORF78589 - 0.034 14.2 5.3 0.052 13.6 5.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1836) DUF2544 PF11245.8 ORF78430 - 0.025 14.1 0.1 0.028 13.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2544) Rtt106 PF08512.12 ORF78430 - 0.038 14.4 0.0 0.072 13.5 0.0 1.5 1 1 0 1 1 1 0 Histone chaperone Rttp106-like NACHT PF05729.12 ORF75496 - 0.094 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 NACHT domain PTSIIA_gutA PF03829.13 ORF74124 - 4.9e-39 132.7 0.0 5.5e-39 132.5 0.0 1.0 1 0 0 1 1 1 1 PTS system glucitol/sorbitol-specific IIA component DUF2457 PF10446.9 ORF73838 - 1.7 7.7 5.8 1.7 7.7 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Hepatitis_core PF00906.20 ORF73838 - 3.4 7.2 11.4 3.6 7.1 11.4 1.1 1 0 0 1 1 1 0 Hepatitis core antigen NYN PF01936.18 ORF72574 - 0.00011 22.8 0.0 0.00013 22.5 0.0 1.1 1 0 0 1 1 1 1 NYN domain Vanabin-2 PF11437.8 ORF72191 - 0.022 14.9 14.1 0.029 14.5 14.1 1.2 1 0 0 1 1 1 0 Vanadium-binding protein 2 Noggin PF05806.12 ORF72191 - 0.085 12.8 6.4 0.097 12.6 6.4 1.1 1 0 0 1 1 1 0 Noggin TatD_DNase PF01026.21 ORF71807 - 0.087 12.2 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 TatD related DNase TrkA_N PF02254.18 ORF71807 - 0.18 12.1 0.0 0.43 10.9 0.0 1.6 2 0 0 2 2 2 0 TrkA-N domain Ecotin PF03974.13 ORF6951 - 3.2e-47 159.5 0.1 3.6e-47 159.3 0.1 1.0 1 0 0 1 1 1 1 Ecotin SP2 PF03014.14 ORF6951 - 0.099 11.0 0.0 0.13 10.7 0.0 1.1 1 0 0 1 1 1 0 Structural protein 2 CcmH PF03918.14 ORF69402 - 0.0079 15.5 0.1 0.01 15.2 0.1 1.3 1 1 0 1 1 1 1 Cytochrome C biogenesis protein cNMP_binding PF00027.29 ORF6858 - 2.7e-07 30.5 0.0 3.9e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Ribosomal_L23 PF00276.20 ORF68446 - 1.1e-13 51.4 1.9 8.3e-13 48.5 1.9 2.1 1 1 0 1 1 1 1 Ribosomal protein L23 Ribosomal_L23eN PF03939.13 ORF68446 - 9.1e-08 32.2 2.0 9.1e-08 32.2 2.0 1.9 2 0 0 2 2 2 1 Ribosomal protein L23, N-terminal domain Dala_Dala_lig_N PF01820.21 ORF63318 - 0.4 11.2 1.6 6.3 7.3 0.2 2.1 1 1 1 2 2 2 0 D-ala D-ala ligase N-terminus Renin_r PF07850.14 ORF60787 - 0.12 13.0 0.1 0.18 12.4 0.1 1.3 1 0 0 1 1 1 0 Renin receptor-like protein Pkinase PF00069.25 ORF60594 - 1.7e-17 63.7 0.0 2.1e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60594 - 1.9e-06 27.4 0.0 2.5e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF60594 - 3.8e-06 26.4 0.0 4.7e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like TRF PF08558.10 ORF59336 - 0.32 10.6 1.9 0.48 10.0 1.9 1.2 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) DUF3696 PF12476.8 ORF59034 - 0.0018 18.6 0.8 0.013 15.8 0.3 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3696) Ligase_CoA PF00549.19 ORF57477 - 8.9e-13 48.3 0.1 9.9e-13 48.2 0.1 1.1 1 0 0 1 1 1 1 CoA-ligase TFIIS_C PF01096.18 ORF56982 - 0.004 17.0 3.9 0.015 15.2 3.9 1.9 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) zf-CSL PF05207.13 ORF56982 - 0.021 14.5 0.5 0.039 13.7 0.4 1.5 2 0 0 2 2 2 0 CSL zinc finger Zn-ribbon_8 PF09723.10 ORF56982 - 6 7.1 8.6 31 4.8 8.7 2.0 1 1 0 1 1 1 0 Zinc ribbon domain DUF5367 PF17329.2 ORF56823 - 0.027 14.6 1.6 0.027 14.6 1.6 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5367) DUF5635 PF18685.1 ORF56637 - 0.15 12.0 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5635) DUF3562 PF12085.8 ORF550 - 0.031 13.9 0.0 0.05 13.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) tRNA-synt_2d PF01409.20 ORF54824 - 3.5e-57 193.7 0.5 3.9e-57 193.6 0.5 1.0 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 ORF54824 - 0.00057 19.4 0.0 0.00077 19.0 0.0 1.1 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain UCR_Fe-S_N PF10399.9 ORF54439 - 0.018 14.4 1.5 0.018 14.4 1.5 1.8 2 0 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Vif PF00559.17 ORF54280 - 0.072 12.8 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 Retroviral Vif (Viral infectivity) protein zf-C3HC4 PF00097.25 ORF53351 - 0.086 12.7 10.0 0.41 10.6 5.6 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.7 ORF53351 - 0.41 10.7 12.8 0.92 9.6 7.9 2.8 1 1 1 2 2 2 0 Double zinc ribbon HypA PF01155.19 ORF53351 - 1.2 9.2 9.7 0.13 12.3 0.6 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-H2C2_2 PF13465.6 ORF53351 - 4.3 7.9 14.3 5.5 7.6 0.5 3.8 4 0 0 4 4 4 0 Zinc-finger double domain zinc-ribbons_6 PF07191.12 ORF53351 - 8 6.5 16.8 15 5.7 6.9 3.1 1 1 1 2 2 2 0 zinc-ribbons SLIDE PF09111.10 ORF52919 - 0.0095 16.0 2.7 0.014 15.4 2.7 1.2 1 0 0 1 1 1 1 SLIDE DCD PF06559.11 ORF52919 - 0.062 12.1 0.5 0.078 11.8 0.5 1.2 1 0 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) UPF0565 PF10561.9 ORF47718 - 0.065 12.4 0.4 0.075 12.2 0.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 RSRP PF17069.5 ORF47606 - 4.7 6.7 16.0 5.8 6.4 16.0 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 ASD2 PF08687.11 ORF46994 - 2.2 7.8 16.0 2.8 7.4 16.0 1.1 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 FAM220 PF15487.6 ORF46994 - 3.7 7.1 12.7 4.4 6.8 12.7 1.1 1 0 0 1 1 1 0 FAM220 family DTHCT PF08070.11 ORF46994 - 4.9 7.9 28.4 12 6.7 28.4 1.7 1 1 0 1 1 1 0 DTHCT (NUC029) region DUF3827 PF12877.7 ORF46994 - 8.9 4.6 15.8 10 4.3 15.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Sugar_tr PF00083.24 ORF46800 - 0.00017 20.6 1.4 0.00021 20.3 1.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter SieB PF14163.6 ORF46800 - 0.014 14.9 0.2 0.016 14.7 0.2 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B Glyco_tranf_2_5 PF13712.6 ORF46322 - 0.029 14.1 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family SPAR_C PF11881.8 ORF46107 - 0.079 12.9 0.0 0.091 12.7 0.0 1.3 1 1 0 1 1 1 0 C-terminal domain of SPAR protein CwsA PF10814.8 ORF46107 - 0.11 12.6 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Cell wall synthesis protein CwsA HATPase_c_3 PF13589.6 ORF44993 - 0.08 12.8 0.1 0.097 12.5 0.1 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRAPP PF04051.16 ORF44753 - 2.2e-23 82.6 0.0 2.4e-23 82.5 0.0 1.0 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component STE PF02200.16 ORF43667 - 0.0085 16.5 0.3 0.011 16.2 0.3 1.1 1 0 0 1 1 1 1 STE like transcription factor CMV_US PF08001.11 ORF42705 - 1.9 7.7 6.8 2.7 7.2 6.8 1.1 1 0 0 1 1 1 0 CMV US PA14 PF07691.12 ORF39543 - 2.3e-06 27.5 0.4 2.3e-06 27.5 0.4 1.7 2 1 0 2 2 2 1 PA14 domain REC104 PF17378.2 ORF39543 - 0.033 14.0 0.5 0.043 13.6 0.5 1.3 1 0 0 1 1 1 0 Meiotic recombination protein REC104 FliMN_C PF01052.20 ORF39543 - 0.18 11.8 0.0 0.33 11.0 0.0 1.4 1 0 0 1 1 1 0 Type III flagellar switch regulator (C-ring) FliN C-term DUF4218 PF13960.6 ORF38883 - 0.1 12.3 0.1 0.16 11.6 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4218) DAD PF02109.16 ORF38429 - 8.2e-23 80.8 0.2 9.2e-23 80.6 0.2 1.0 1 0 0 1 1 1 1 DAD family Aa_trans PF01490.18 ORF38429 - 0.0052 15.5 0.9 0.0061 15.3 0.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF5345 PF17280.2 ORF38429 - 0.17 11.8 1.1 0.39 10.7 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5345) DUF3043 PF11241.8 ORF37792 - 0.041 13.9 0.4 0.054 13.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) NDUF_B6 PF09782.9 ORF37792 - 0.11 12.6 0.3 0.11 12.6 0.3 1.8 1 1 1 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit Dala_Dala_lig_N PF01820.21 ORF37731 - 0.4 11.2 1.6 6.3 7.3 0.2 2.1 1 1 1 2 2 2 0 D-ala D-ala ligase N-terminus DUF1010 PF06231.11 ORF36691 - 0.096 13.2 10.4 0.54 10.8 10.4 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1010) BTK PF00779.19 ORF36560 - 1 9.2 6.8 3.8 7.4 0.3 2.3 2 0 0 2 2 2 0 BTK motif zf-P11 PF03854.14 ORF33767 - 0.063 13.0 8.2 0.082 12.6 4.8 2.6 2 1 0 2 2 2 0 P-11 zinc finger Phyto_Pns9_10 PF05878.11 ORF33244 - 0.0083 15.3 0.2 0.0087 15.2 0.2 1.2 1 0 0 1 1 1 1 Phytoreovirus nonstructural protein Pns9/Pns10 Hexapep PF00132.24 ORF32240 - 1.1e-06 28.1 3.6 0.00063 19.4 3.8 2.6 1 1 1 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF32240 - 0.00089 19.0 6.4 0.0014 18.3 5.0 1.9 1 1 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF32240 - 0.0027 16.7 0.2 0.0035 16.3 0.2 1.1 1 0 0 1 1 1 1 L-fucokinase zf-C3HC4 PF00097.25 ORF3128 - 0.019 14.9 6.5 0.032 14.1 6.5 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF3128 - 0.037 14.4 3.1 0.063 13.6 3.1 1.4 1 0 0 1 1 1 0 Ring finger domain DNA_pol3_delt_C PF14840.6 ORF3128 - 0.049 14.0 0.0 0.077 13.3 0.0 1.3 1 0 0 1 1 1 0 Processivity clamp loader gamma complex DNA pol III C-term CHIP_TPR_N PF18391.1 ORF28857 - 0.13 13.0 0.0 0.2 12.4 0.0 1.3 1 0 0 1 1 1 0 CHIP N-terminal tetratricopeptide repeat domain LIP1 PF15904.5 ORF27949 - 0.095 13.1 0.4 0.13 12.6 0.4 1.3 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 US22 PF02393.16 ORF27463 - 0.091 13.0 1.5 0.13 12.6 1.5 1.2 1 0 0 1 1 1 0 US22 like DUF1799 PF08809.11 ORF24667 - 0.076 13.2 0.1 0.21 11.8 0.1 1.7 1 1 0 1 1 1 0 Phage related hypothetical protein (DUF1799) CoA_binding_3 PF13727.6 ORF22719 - 0.039 14.0 1.0 0.047 13.7 1.0 1.2 1 0 0 1 1 1 0 CoA-binding domain TCR PF03638.15 ORF22515 - 0.057 13.7 6.8 0.18 12.2 6.8 1.9 1 1 0 1 1 1 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain DUF987 PF06174.11 ORF20934 - 0.092 12.7 0.5 0.18 11.7 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF987) DUF1068 PF06364.12 ORF20633 - 0.094 12.6 0.4 0.11 12.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) Peptidase_S55 PF05580.12 ORF20002 - 0.059 13.3 0.0 0.077 12.9 0.0 1.1 1 0 0 1 1 1 0 SpoIVB peptidase S55 Mito_morph_reg PF14972.6 ORF19450 - 0.013 15.1 1.0 0.016 14.8 1.0 1.2 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator DUF5601 PF18151.1 ORF17675 - 0.013 15.8 0.1 0.025 14.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5601) 23S_rRNA_IVP PF05635.11 ORF17675 - 0.029 14.6 0.2 0.043 14.1 0.1 1.4 1 1 0 1 1 1 0 23S rRNA-intervening sequence protein DUF2070 PF09843.9 ORF17465 - 1.5 7.1 8.5 1.7 6.9 8.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2076 PF09849.9 ORF1720 - 0.53 10.3 7.3 0.6 10.1 7.3 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF4823 PF16105.5 ORF15648 - 0.094 12.6 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4823) DUF1378 PF07125.11 ORF152035 - 0.074 13.2 0.2 0.17 12.1 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1378) DUF5589 PF17672.1 ORF151179 - 0.36 10.8 8.5 1.2 9.0 5.9 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5589) SDH_alpha PF03313.15 ORF149408 - 4.7 6.8 8.9 5.6 6.6 8.9 1.1 1 0 0 1 1 1 0 Serine dehydratase alpha chain DUF3232 PF11554.8 ORF149284 - 0.024 15.0 8.3 0.028 14.8 8.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) SlyX PF04102.12 ORF149284 - 0.18 12.4 9.2 0.54 10.9 9.2 1.9 1 1 0 1 1 1 0 SlyX ATG16 PF08614.11 ORF149284 - 1.8 8.7 16.1 0.69 10.1 13.6 1.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Atg14 PF10186.9 ORF149284 - 2.1 7.4 12.9 2.6 7.0 12.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF149284 - 4.5 7.8 19.7 1.1 9.7 0.6 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region Golgin_A5 PF09787.9 ORF149284 - 5.2 6.4 19.7 11 5.4 19.7 1.6 1 1 0 1 1 1 0 Golgin subfamily A member 5 DUF4337 PF14235.6 ORF149284 - 8.3 6.5 9.4 4.8 7.3 7.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) PNP_phzG_C PF10590.9 ORF148859 - 0.016 15.3 0.2 0.05 13.7 0.1 1.8 2 0 0 2 2 2 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DUF2457 PF10446.9 ORF14786 - 1.7 7.7 5.8 1.7 7.7 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Hepatitis_core PF00906.20 ORF14786 - 3.4 7.2 11.4 3.6 7.1 11.4 1.1 1 0 0 1 1 1 0 Hepatitis core antigen Ribosomal_S13 PF00416.22 ORF147540 - 2.2e-40 138.0 0.3 2.6e-40 137.8 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 POM121 PF15229.6 ORF146215 - 0.5 10.0 4.2 0.56 9.8 4.2 1.1 1 0 0 1 1 1 0 POM121 family Dynein_AAA_lid PF17852.1 ORF144930 - 0.089 12.9 0.0 0.097 12.8 0.0 1.3 1 1 0 1 1 1 0 Dynein heavy chain AAA lid domain DUF1645 PF07816.11 ORF144463 - 0.015 15.9 1.6 0.019 15.6 1.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1645) RNA_helicase PF00910.22 ORF144164 - 0.0026 18.1 0.0 0.0034 17.7 0.0 1.1 1 0 0 1 1 1 1 RNA helicase ALG11_N PF15924.5 ORF144164 - 0.1 12.6 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus SHP PF03579.13 ORF143985 - 0.0078 16.2 0.3 0.0078 16.2 0.3 2.8 2 1 1 3 3 3 1 Small hydrophobic protein DUF2958 PF11171.8 ORF14367 - 0.17 12.2 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2958) DUF4870 PF09685.10 ORF143597 - 0.038 14.1 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4870) Megourin PF17560.2 ORF143449 - 0.0014 18.8 0.1 0.0021 18.2 0.1 1.3 1 0 0 1 1 1 1 Aphid Megourins MORN PF02493.20 ORF142114 - 9.2e-26 88.2 39.1 9.1e-08 31.6 2.4 6.1 6 0 0 6 6 6 6 MORN repeat PsbM PF05151.12 ORF141928 - 4 7.3 12.5 6.2 6.7 2.0 2.4 2 0 0 2 2 2 0 Photosystem II reaction centre M protein (PsbM) LIP1 PF15904.5 ORF13991 - 0.095 13.1 0.4 0.13 12.6 0.4 1.3 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 DUF4589 PF15252.6 ORF138673 - 0.051 13.6 0.6 0.054 13.5 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) DUF2457 PF10446.9 ORF138414 - 1.7 7.7 5.8 1.7 7.7 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Hepatitis_core PF00906.20 ORF138414 - 3.4 7.2 11.4 3.6 7.1 11.4 1.1 1 0 0 1 1 1 0 Hepatitis core antigen Trypan_PARP PF05887.11 ORF138369 - 0.13 12.2 2.2 0.16 11.9 2.2 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) STE PF02200.16 ORF13831 - 0.0085 16.5 0.3 0.011 16.2 0.3 1.1 1 0 0 1 1 1 1 STE like transcription factor DUF4131 PF13567.6 ORF136839 - 0.061 13.0 1.1 0.089 12.4 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) GST_C_3 PF14497.6 ORF136712 - 7.3e-12 45.4 0.6 1e-11 44.9 0.6 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF136712 - 2.5e-07 30.8 0.2 3.4e-07 30.4 0.2 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF136712 - 0.00023 20.9 1.5 0.00025 20.8 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF136712 - 0.00028 20.9 0.0 0.00045 20.2 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Sep15_SelM PF08806.11 ORF136712 - 0.0026 17.9 1.1 1.8 8.8 0.1 3.1 1 1 3 4 4 4 3 Sep15/SelM redox domain DASH_Dam1 PF08653.10 ORF136712 - 0.031 14.1 0.1 0.14 12.0 0.0 1.9 2 0 0 2 2 2 0 DASH complex subunit Dam1 YqfQ PF14181.6 ORF134910 - 0.9 9.7 8.8 1.2 9.3 8.8 1.1 1 0 0 1 1 1 0 YqfQ-like protein O-antigen_lig PF13425.6 ORF134910 - 6.4 5.5 6.4 7 5.3 6.4 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Rhabdo_glycop PF00974.18 ORF134597 - 0.042 12.3 0.0 0.053 12.0 0.0 1.2 1 0 0 1 1 1 0 Rhabdovirus spike glycoprotein DUF872 PF05915.12 ORF134597 - 0.045 13.9 0.1 0.084 13.1 0.1 1.4 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) DUF4448 PF14610.6 ORF134597 - 0.046 13.5 0.1 0.092 12.5 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4448) Endomucin PF07010.12 ORF134597 - 0.1 12.6 4.7 0.16 12.0 4.6 1.4 1 1 0 1 1 1 0 Endomucin EVI2A PF05399.11 ORF134597 - 0.19 11.3 1.4 0.17 11.4 0.2 1.5 1 1 1 2 2 2 0 Ectropic viral integration site 2A protein (EVI2A) Shisa PF13908.6 ORF134597 - 0.3 11.3 7.3 5.5 7.2 3.5 2.0 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator LRRC37AB_C PF14914.6 ORF134597 - 0.53 10.2 8.1 0.064 13.2 3.0 1.9 2 1 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain TMEM154 PF15102.6 ORF134597 - 0.81 9.6 7.6 0.11 12.4 3.1 2.0 1 1 1 2 2 2 0 TMEM154 protein family Cadherin_C_2 PF16492.5 ORF134597 - 1.1 10.1 5.4 2.8 8.7 3.3 2.1 2 1 0 2 2 2 0 Cadherin cytoplasmic C-terminal LSR PF05624.14 ORF134597 - 1.1 9.3 6.2 0.62 10.1 3.0 1.9 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) CRA PF06589.11 ORF134597 - 1.6 8.9 6.3 6.2 6.9 6.3 1.9 1 1 0 1 1 1 0 Circumsporozoite-related antigen (CRA) ABC2_membrane_3 PF12698.7 ORF131291 - 0.27 10.3 11.9 0.34 10.0 11.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein MORN PF02493.20 ORF129738 - 7.7e-25 85.3 37.6 5.5e-08 32.2 2.0 6.1 6 0 0 6 6 6 6 MORN repeat ANT PF03374.14 ORF12767 - 0.17 12.2 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 Phage antirepressor protein KilAC domain DUF5536 PF17688.1 ORF126235 - 0.071 13.0 0.2 0.075 12.9 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5536) YbfN PF13982.6 ORF126005 - 0.1 12.9 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 YbfN-like lipoprotein DUF1378 PF07125.11 ORF123813 - 0.074 13.2 0.2 0.17 12.1 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1378) Ion_trans PF00520.31 ORF121671 - 1.4e-07 31.0 2.2 1.8e-07 30.7 2.2 1.1 1 0 0 1 1 1 1 Ion transport protein DUF92 PF01940.16 ORF121671 - 0.0079 15.6 2.9 0.018 14.4 2.9 1.6 1 1 0 1 1 1 1 Integral membrane protein DUF92 GAS2 PF02187.17 ORF1205 - 1.7e-06 28.0 0.0 2.6e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks214.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks214.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks214.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks214.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:06 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aldo_ket_red PF00248.21 ORF118555 - 2e-09 37.1 0.0 2.5e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Frankia_peptide PF14407.6 ORF118555 - 0.074 13.0 0.2 0.25 11.4 0.1 1.8 2 0 0 2 2 2 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. Rota_NSP4 PF01452.16 ORF11682 - 0.013 15.2 2.5 0.014 15.1 2.3 1.3 1 1 0 1 1 1 0 Rotavirus non structural protein UPF0114 PF03350.16 ORF11682 - 0.078 13.2 4.5 0.13 12.5 3.9 1.7 1 1 1 2 2 2 0 Uncharacterized protein family, UPF0114 DUF4804 PF16062.5 ORF11682 - 0.12 11.1 0.1 0.15 10.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4804) CDC14 PF08045.11 ORF11682 - 0.18 10.9 3.1 0.2 10.8 3.1 1.1 1 0 0 1 1 1 0 Cell division control protein 14, SIN component Orbi_NS1 PF01718.16 ORF115987 - 0.16 10.4 0.1 0.16 10.4 0.1 1.1 1 0 0 1 1 1 0 Orbivirus non-structural protein NS1, or hydrophobic tubular protein CcdB PF01845.17 ORF115071 - 0.07 13.4 0.0 6.7 7.0 0.0 2.1 2 0 0 2 2 2 0 CcdB protein DUF4218 PF13960.6 ORF112949 - 0.1 12.3 0.1 0.16 11.6 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4218) Ribosomal_L6e_N PF03868.15 ORF111317 - 1.2 9.5 3.8 1.5 9.1 0.6 2.1 2 0 0 2 2 2 0 Ribosomal protein L6, N-terminal domain DUF1198 PF06711.11 ORF110391 - 0.094 12.8 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1198) DUF5110 PF17137.4 ORF110117 - 0.00014 22.1 2.9 0.0003 21.0 2.1 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF5110) RPA_C PF08784.11 ORF10980 - 0.0047 17.6 1.1 0.0066 17.1 1.1 1.2 1 0 0 1 1 1 1 Replication protein A C terminal NUDIX PF00293.28 ORF108835 - 9e-13 48.4 0.0 9.9e-13 48.3 0.0 1.0 1 0 0 1 1 1 1 NUDIX domain NLPC_P60 PF00877.19 ORF108125 - 1.7e-33 114.7 0.0 2e-33 114.6 0.0 1.0 1 0 0 1 1 1 1 NlpC/P60 family DUF1175 PF06672.11 ORF108125 - 0.00031 20.5 0.0 0.31 10.7 0.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1175) Peptidase_C92 PF05708.12 ORF108125 - 0.00068 19.8 0.0 0.53 10.4 0.0 2.4 2 1 0 2 2 2 2 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Amidase_6 PF12671.7 ORF108125 - 0.0012 18.9 0.0 0.0014 18.7 0.0 1.1 1 0 0 1 1 1 1 Putative amidase domain Amidase_5 PF05382.13 ORF108125 - 0.0082 16.1 0.2 0.025 14.5 0.2 1.7 1 1 0 1 1 1 1 Bacteriophage peptidoglycan hydrolase CHAP PF05257.16 ORF108125 - 0.012 16.2 0.0 0.019 15.5 0.0 1.4 1 1 0 1 1 1 0 CHAP domain LRAT PF04970.13 ORF108125 - 0.12 12.7 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Lecithin retinol acyltransferase NepR PF18557.1 ORF106364 - 0.19 11.4 0.4 0.29 10.8 0.4 1.3 1 0 0 1 1 1 0 Anti-sigma factor NepR Utp12 PF04003.12 ORF105943 - 0.19 12.1 2.5 0.24 11.7 2.5 1.3 1 0 0 1 1 1 0 Dip2/Utp12 Family CcdB PF01845.17 ORF105850 - 0.07 13.4 0.0 6.7 7.0 0.0 2.1 2 0 0 2 2 2 0 CcdB protein Inhibitor_I10 PF12559.8 ORF105482 - 0.98 9.7 3.1 12 6.3 0.0 2.4 2 1 0 2 2 2 0 Serine endopeptidase inhibitors Protocadherin PF08374.11 ORF10507 - 0.24 11.4 1.6 0.31 11.0 1.6 1.2 1 0 0 1 1 1 0 Protocadherin CBFD_NFYB_HMF PF00808.23 ORF104958 - 0.00015 22.0 0.0 0.00028 21.1 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-T_C PF15511.6 ORF104958 - 0.00019 21.5 0.0 0.00031 20.8 0.0 1.3 1 1 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold AbiEi_4 PF13338.6 ORF104958 - 0.079 13.1 0.2 0.14 12.3 0.2 1.4 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin Histone PF00125.24 ORF104958 - 0.25 11.7 2.5 0.67 10.3 2.5 1.7 1 1 0 1 1 1 0 Core histone H2A/H2B/H3/H4 ABC_tran PF00005.27 ORF103696 - 7.7e-10 39.4 0.1 2.6e-09 37.7 0.0 1.7 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF103696 - 0.0085 15.6 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF4388 PF14332.6 ORF103696 - 0.012 15.9 0.0 0.017 15.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4388) SbcCD_C PF13558.6 ORF103696 - 0.032 14.4 0.2 0.18 12.1 0.2 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit zf-C3HC4 PF00097.25 ORF102478 - 0.019 14.9 6.5 0.032 14.1 6.5 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF102478 - 0.037 14.4 3.1 0.063 13.6 3.1 1.4 1 0 0 1 1 1 0 Ring finger domain DNA_pol3_delt_C PF14840.6 ORF102478 - 0.049 14.0 0.0 0.077 13.3 0.0 1.3 1 0 0 1 1 1 0 Processivity clamp loader gamma complex DNA pol III C-term DUF3927 PF13064.6 ORF101996 - 0.053 13.5 1.3 0.095 12.7 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3927) A2L_zn_ribbon PF08792.10 ORF101430 - 1.1 9.1 6.2 3.6 7.4 6.0 2.0 1 1 1 2 2 2 0 A2L zinc ribbon domain HTH_Crp_2 PF13545.6 ORF100926 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain He_PIG PF05345.12 NODE_50507_length_364_cov_1.455927_g42607_i0reverse_frame_1 - 0.019 15.1 8.8 0.034 14.3 6.8 2.2 1 1 1 2 2 2 0 Putative Ig domain MG3 PF17791.1 NODE_50507_length_364_cov_1.455927_g42607_i0reverse_frame_1 - 0.074 13.3 0.7 0.12 12.6 0.3 1.6 2 0 0 2 2 2 0 Macroglobulin domain MG3 DUF5317 PF17248.2 NODE_50503_length_364_cov_1.689970_g42603_i0reverse_frame_1 - 0.12 12.4 5.0 0.16 11.9 5.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5317) Filamin PF00630.19 NODE_50499_length_364_cov_1.893617_g42599_i0forward_frame_1 - 4.2e-10 40.4 0.0 7.4e-10 39.6 0.0 1.4 2 0 0 2 2 2 1 Filamin/ABP280 repeat WBP-1 PF11669.8 NODE_50495_length_364_cov_1.993921_g42595_i0reverse_frame_1 - 2.6 8.7 8.3 0.069 13.8 1.6 1.7 2 0 0 2 2 2 0 WW domain-binding protein 1 Osw5 PF17062.5 NODE_50495_length_364_cov_1.993921_g42595_i0forward_frame_1 - 0.0034 17.4 2.7 0.0037 17.3 1.7 1.6 1 1 0 1 1 1 1 Outer spore wall 5 T_Ag_DNA_bind PF02217.16 NODE_50495_length_364_cov_1.993921_g42595_i0forward_frame_1 - 0.011 16.3 0.8 0.019 15.5 0.8 1.5 1 0 0 1 1 1 0 Origin of replication binding protein DUF4789 PF16033.5 NODE_50492_length_364_cov_2.537994_g42592_i0reverse_frame_1 - 0.038 14.5 1.0 0.038 14.5 1.0 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4789) QueF PF14489.6 NODE_50489_length_364_cov_2.696049_g42589_i0reverse_frame_1 - 0.0016 18.6 0.6 0.0034 17.5 0.2 1.8 1 1 1 2 2 2 1 QueF-like protein Arg_tRNA_synt_N PF03485.16 NODE_50487_length_364_cov_2.951368_g42587_i0reverse_frame_1 - 3.7e-11 43.5 0.2 4.8e-11 43.1 0.2 1.2 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain PKD_3 PF16820.5 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_1 - 0.14 11.9 0.1 4.7 7.0 0.0 2.2 1 1 1 2 2 2 0 PKD-like domain RIFIN PF02009.16 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.00056 19.9 4.4 0.00056 19.9 4.4 1.4 1 1 1 2 2 2 1 Rifin Orf78 PF06024.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0023 18.2 10.3 0.0023 18.2 10.3 1.9 1 1 1 2 2 2 1 Orf78 (ac78) Peptidase_M56 PF05569.11 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0038 16.5 0.6 0.004 16.4 0.6 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF5383 PF17355.2 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0046 17.3 1.0 0.0079 16.6 1.0 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5383) DUF5362 PF17319.2 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0078 16.0 0.2 0.012 15.5 0.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5362) DUF4366 PF14283.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0087 16.1 1.0 0.0087 16.1 1.0 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4366) JTB PF05439.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.0097 15.9 0.6 0.012 15.6 0.6 1.2 1 0 0 1 1 1 1 Jumping translocation breakpoint protein (JTB) LRRC37AB_C PF14914.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.014 15.3 2.3 0.019 14.9 2.3 1.2 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain EphA2_TM PF14575.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.014 16.3 0.1 0.014 16.3 0.1 2.2 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF2615 PF11027.8 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.018 15.2 4.4 0.018 15.2 4.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2615) DUF1180 PF06679.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.018 15.4 2.4 0.018 15.4 2.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1180) DUF2500 PF10694.9 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.02 15.4 0.4 0.02 15.4 0.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) Ctr PF04145.15 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.021 15.4 1.6 0.021 15.4 1.6 1.7 1 1 1 2 2 2 0 Ctr copper transporter family Glucos_trans_II PF14264.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.024 14.0 0.1 0.027 13.8 0.1 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII DUF5385 PF17359.2 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.037 13.6 1.8 0.037 13.6 1.8 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5385) SARAF PF06682.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.048 13.3 8.8 0.12 12.0 8.4 1.7 1 1 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Ca_hom_mod PF14798.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.053 12.6 0.3 0.064 12.3 0.3 1.1 1 0 0 1 1 1 0 Calcium homeostasis modulator CSG2 PF16965.5 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.15 11.0 4.0 0.18 10.7 4.0 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator Renin_r PF07850.14 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.18 12.4 4.4 0.24 12.0 4.2 1.4 1 1 0 1 1 1 0 Renin receptor-like protein HCO3_cotransp PF00955.21 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.2 10.4 5.1 0.24 10.2 5.1 1.1 1 0 0 1 1 1 0 HCO3- transporter family ABC2_membrane_3 PF12698.7 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.43 9.7 8.1 0.55 9.3 8.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Pox_EPC_I2-L1 PF12575.8 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.44 10.8 5.9 0.13 12.5 2.1 2.0 1 1 1 2 2 2 0 Poxvirus entry protein complex L1 and I2 TMEM154 PF15102.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 0.83 9.5 19.6 0.065 13.1 13.2 2.1 1 1 1 2 2 2 0 TMEM154 protein family Kei1 PF08552.11 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 1.2 9.0 4.1 0.42 10.5 1.5 1.5 1 1 1 2 2 2 0 Inositolphosphorylceramide synthase subunit Kei1 Shisa PF13908.6 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 1.8 8.8 14.9 1.2 9.3 9.3 2.0 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator Macoilin PF09726.9 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 1.8 7.0 12.5 1.9 7.0 12.5 1.0 1 0 0 1 1 1 0 Macoilin family MAP17 PF15807.5 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 2.9 8.1 0.0 2.9 8.1 0.0 2.1 1 1 1 2 2 2 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF3671 PF12420.8 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 3.7 7.7 6.8 7 6.8 6.7 1.6 1 1 0 1 1 1 0 Protein of unknown function CrgA PF06781.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_1 - 9.7 6.3 7.2 1.3 9.1 0.9 2.3 1 1 1 2 2 2 0 Cell division protein CrgA zf-C3HC4_2 PF13923.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 1.1e-09 38.0 8.9 1.9e-09 37.2 8.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 4e-09 36.7 9.2 6.8e-09 35.9 9.2 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 1.3e-08 34.6 8.9 2.1e-08 33.9 8.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 1.2e-07 31.5 6.6 2.3e-07 30.6 6.6 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 4.4e-07 29.7 7.8 8.8e-07 28.7 7.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 2.2e-06 27.6 3.4 2.2e-06 27.6 3.4 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-rbx1 PF12678.7 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 2.2e-05 24.7 4.4 2.2e-05 24.7 4.4 1.7 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.00065 19.8 7.2 0.0012 18.9 7.2 1.6 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-C3HC4_4 PF15227.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.0091 16.1 8.7 0.031 14.4 8.6 2.0 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.0092 15.8 10.9 0.018 14.9 10.9 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.22 11.4 10.0 1.1 9.2 10.0 2.0 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_6 PF14835.6 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_1 - 0.22 11.4 6.5 5.6 6.9 7.0 2.2 1 1 1 2 2 2 0 zf-RING of BARD1-type protein DUF3270 PF11674.8 NODE_50462_length_364_cov_70.896657_g42562_i0forward_frame_1 - 0.048 13.9 1.6 0.062 13.5 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DNApol_Exo PF18136.1 NODE_50462_length_364_cov_70.896657_g42562_i0forward_frame_1 - 0.05 12.7 0.0 0.065 12.4 0.0 1.1 1 0 0 1 1 1 0 DNA mitochondrial polymerase exonuclease domain Fer4_9 PF13187.6 NODE_50453_length_364_cov_107.158055_g42553_i0forward_frame_1 - 0.33 11.2 10.6 0.66 10.2 10.6 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain EF-hand_1 PF00036.32 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 5.2e-07 28.8 0.3 9.8e-07 27.9 0.3 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 2.5e-06 26.9 0.1 5.8e-06 25.8 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 3.5e-05 24.2 0.1 4.8e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 6.2e-05 22.8 1.1 0.0001 22.1 0.7 1.6 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 0.00021 20.6 0.4 0.0004 19.8 0.4 1.5 1 0 0 1 1 1 1 EF hand P16-Arc PF04699.14 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 0.042 14.4 0.1 0.049 14.1 0.1 1.1 1 0 0 1 1 1 0 ARP2/3 complex 16 kDa subunit (p16-Arc) EF-hand_4 PF12763.7 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 0.05 13.6 0.2 0.07 13.1 0.2 1.3 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand IF2_N PF04760.15 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_1 - 0.09 12.6 0.2 1.1 9.1 0.1 2.5 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region GTP1_OBG PF01018.22 NODE_50450_length_364_cov_116.343465_g42550_i0reverse_frame_1 - 0.062 12.9 3.9 0.16 11.5 3.9 1.7 1 1 1 2 2 2 0 GTP1/OBG Hydantoinase_B PF02538.14 NODE_50450_length_364_cov_116.343465_g42550_i0reverse_frame_1 - 0.14 10.6 4.7 0.18 10.2 4.7 1.1 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase TPR_11 PF13414.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 2.1e-19 68.9 4.7 2e-09 37.0 0.1 3.3 2 2 1 3 3 3 3 TPR repeat TPR_2 PF07719.17 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 1.6e-18 65.2 0.9 2.4e-07 30.3 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 8.8e-17 60.1 3.6 6.3e-07 28.9 0.1 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 1.6e-15 56.3 1.3 2.3e-07 30.7 0.1 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 2.3e-11 43.0 2.3 0.00011 22.2 0.1 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 8.4e-09 35.8 0.1 0.00032 21.2 0.0 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 1.5e-07 31.6 0.2 4.3e-05 23.7 0.0 2.4 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 6e-07 29.1 0.1 0.002 18.0 0.0 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 4.9e-06 27.1 0.0 2.8e-05 24.7 0.0 1.9 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 2.6e-05 23.6 0.0 0.00012 21.4 0.0 1.9 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 5.4e-05 23.6 0.0 0.43 11.3 0.0 3.4 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.00011 22.7 0.0 0.17 12.8 0.0 2.7 1 1 1 2 2 2 2 Tetratricopeptide repeat EST1_DNA_bind PF10373.9 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.00093 18.7 0.7 0.00097 18.7 0.7 1.1 1 0 0 1 1 1 1 Est1 DNA/RNA binding domain TPR_20 PF14561.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.007 16.7 0.1 1.8 8.9 0.0 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat NARP1 PF12569.8 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.0096 14.9 0.1 0.015 14.2 0.1 1.3 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 TPR_9 PF13371.6 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.018 15.1 0.0 0.09 12.9 0.0 1.8 1 1 1 2 2 2 0 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.036 14.3 0.8 1.4 9.2 0.1 2.1 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TOM20_plant PF06552.12 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.047 13.4 0.2 0.058 13.1 0.2 1.3 1 1 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 Ycf34 PF10718.9 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 0.064 14.0 0.1 0.15 12.8 0.1 1.6 1 1 1 2 2 2 0 Hypothetical chloroplast protein Ycf34 MIT PF04212.18 NODE_50445_length_364_cov_168.768997_g42545_i0forward_frame_1 - 1.5 8.9 5.5 3.5 7.8 0.4 2.9 3 1 0 3 3 3 0 MIT (microtubule interacting and transport) domain ThiS PF02597.20 NODE_50444_length_364_cov_170.525836_g42544_i0forward_frame_1 - 4.2e-09 36.9 0.0 5.5e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 ThiS family SplA PF11132.8 NODE_50444_length_364_cov_170.525836_g42544_i0forward_frame_1 - 0.012 15.4 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator protein (SplA) Thiolase_C PF02803.18 NODE_50440_length_364_cov_3974.787234_g42540_i0reverse_frame_1 - 0.16 11.7 1.0 0.23 11.1 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain UPF0203 PF05254.12 NODE_50434_length_365_cov_1.842424_g42534_i0forward_frame_1 - 0.029 14.6 0.3 0.059 13.6 0.0 1.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0203) GST_C_6 PF17171.4 NODE_50431_length_365_cov_1.903030_g42531_i0reverse_frame_1 - 0.0049 16.6 0.2 0.019 14.7 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 NODE_50431_length_365_cov_1.903030_g42531_i0reverse_frame_1 - 0.011 16.5 0.1 0.038 14.7 0.1 1.8 2 0 0 2 2 2 0 Glutathione S-transferase N-terminal domain 7TM_GPCR_Srj PF10319.9 NODE_50430_length_365_cov_1.936364_g42530_i0reverse_frame_1 - 0.039 13.3 2.2 0.049 13.0 2.2 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srj Tautomerase PF01361.21 NODE_50428_length_365_cov_2.030303_g42528_i0reverse_frame_1 - 0.15 12.0 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Tautomerase enzyme Glycoprotein PF03409.15 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_1 - 0.031 13.1 12.1 0.035 13.0 12.1 1.1 1 0 0 1 1 1 0 Transmembrane glycoprotein MGC-24 PF05283.11 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_1 - 3.4 8.1 13.3 4.6 7.7 13.3 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin SSP160 PF06933.11 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_1 - 4.4 5.4 27.4 5.4 5.1 27.4 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 TMEM154 PF15102.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.046 13.6 1.3 0.059 13.3 1.3 1.1 1 0 0 1 1 1 0 TMEM154 protein family Shisa PF13908.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.058 13.6 3.3 0.073 13.3 3.3 1.4 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Amnionless PF14828.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.14 10.9 4.3 0.18 10.6 4.3 1.1 1 0 0 1 1 1 0 Amnionless DUF4349 PF14257.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.2 11.1 1.4 0.26 10.7 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF4577 PF15145.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 0.23 11.5 3.0 0.29 11.2 3.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) DUF3040 PF11239.8 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 1.2 9.5 13.7 1.5 9.2 13.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) Orf78 PF06024.12 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_1 - 1.2 9.4 3.1 2.5 8.5 3.1 1.5 1 1 0 1 1 1 0 Orf78 (ac78) RecR PF02132.15 NODE_50396_length_365_cov_58.339394_g42496_i0forward_frame_1 - 0.072 12.7 1.0 0.14 11.8 1.0 1.4 1 0 0 1 1 1 0 RecR protein Zn-ribbon_8 PF09723.10 NODE_50396_length_365_cov_58.339394_g42496_i0forward_frame_1 - 3 8.1 8.0 12 6.1 7.1 2.5 1 1 1 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 NODE_50396_length_365_cov_58.339394_g42496_i0forward_frame_1 - 7.6 6.1 10.0 0.13 11.7 1.8 2.3 3 0 0 3 3 3 0 zinc-ribbon domain GPW_gp25 PF04965.14 NODE_50395_length_365_cov_58.463636_g42495_i0forward_frame_1 - 0.063 13.0 0.1 0.089 12.6 0.1 1.2 1 0 0 1 1 1 0 Gene 25-like lysozyme RPEL PF02755.15 NODE_50393_length_365_cov_61.275758_g42493_i0forward_frame_1 - 0.038 13.7 0.1 0.06 13.1 0.1 1.3 1 0 0 1 1 1 0 RPEL repeat DUF3925 PF13063.6 NODE_50381_length_365_cov_98.718182_g42481_i0forward_frame_1 - 0.26 11.5 4.3 0.46 10.7 0.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3925) GAD-like PF08887.11 NODE_50375_length_365_cov_130.400000_g42475_i0forward_frame_1 - 0.12 12.2 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 GAD-like domain Gon7 PF08738.10 NODE_50374_length_365_cov_136.487879_g42474_i0reverse_frame_1 - 0.028 14.5 0.1 0.028 14.5 0.1 2.3 2 1 0 2 2 2 0 Gon7 family HeLo PF14479.6 NODE_50374_length_365_cov_136.487879_g42474_i0reverse_frame_1 - 0.22 11.3 2.5 0.25 11.2 2.5 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation RNA_polI_A34 PF08208.11 NODE_50374_length_365_cov_136.487879_g42474_i0reverse_frame_1 - 6.3 6.8 27.1 7.2 6.6 27.1 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF4604 PF15377.6 NODE_50374_length_365_cov_136.487879_g42474_i0reverse_frame_1 - 7.6 6.9 27.5 9.6 6.6 27.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) DUF755 PF05501.11 NODE_50370_length_365_cov_168.875758_g42470_i0reverse_frame_1 - 0.4 11.0 1.9 0.59 10.4 1.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Lar_restr_allev PF14354.6 NODE_50368_length_365_cov_174.815152_g42468_i0forward_frame_1 - 1.5 9.3 10.3 4.1 7.9 2.9 2.3 2 0 0 2 2 2 0 Restriction alleviation protein Lar Pro_CA PF00484.19 NODE_50367_length_365_cov_176.760606_g41919_i1reverse_frame_1 - 0.016 15.5 0.2 0.021 15.1 0.2 1.1 1 0 0 1 1 1 0 Carbonic anhydrase zf-C5HC2 PF02928.16 NODE_50361_length_365_cov_411.336364_g42462_i0forward_frame_1 - 0.26 11.7 2.6 18 5.8 0.8 2.2 2 0 0 2 2 2 0 C5HC2 zinc finger Thiolase_C PF02803.18 NODE_50355_length_365_cov_3962.757576_g42457_i0reverse_frame_1 - 0.16 11.7 1.0 0.23 11.1 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain DUF1071 PF06378.11 NODE_50355_length_365_cov_3962.757576_g42457_i0forward_frame_1 - 0.15 11.6 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) zf-WRNIP1_ubi PF18279.1 NODE_50342_length_366_cov_2.453172_g42444_i0reverse_frame_1 - 0.072 13.8 0.4 0.072 13.8 0.4 2.1 2 0 0 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain MORN PF02493.20 NODE_50335_length_366_cov_3.274924_g42437_i0reverse_frame_1 - 0.00096 18.9 9.0 0.0016 18.2 0.1 4.2 5 0 0 5 5 5 1 MORN repeat IFT20 PF14931.6 NODE_50328_length_366_cov_32.649547_g42430_i0reverse_frame_1 - 2.4 8.3 9.1 0.38 10.9 3.0 2.5 2 1 1 3 3 3 0 Intraflagellar transport complex B, subunit 20 LMBR1 PF04791.16 NODE_50328_length_366_cov_32.649547_g42430_i0reverse_frame_1 - 2.5 6.9 4.3 2.7 6.8 4.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein TMEM141 PF15110.6 NODE_50320_length_366_cov_74.595166_g42422_i0reverse_frame_1 - 0.063 13.9 0.2 0.084 13.5 0.2 1.3 1 0 0 1 1 1 0 TMEM141 protein family DUF2781 PF10914.8 NODE_50316_length_366_cov_86.709970_g42418_i0reverse_frame_1 - 0.44 10.9 2.7 2.6 8.5 2.7 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2781) Adeno_52K PF03052.15 NODE_50302_length_366_cov_130.323263_g42404_i0reverse_frame_1 - 0.028 13.8 0.2 0.035 13.6 0.2 1.1 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa MyTH4 PF00784.17 NODE_50291_length_366_cov_226.936556_g42393_i0forward_frame_1 - 1 9.9 3.8 16 6.0 0.3 2.1 2 0 0 2 2 2 0 MyTH4 domain Endonuc_Holl PF10107.9 NODE_50289_length_366_cov_294.099698_g42391_i0reverse_frame_1 - 2.4 8.0 10.9 0.8 9.5 8.1 1.6 1 1 1 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase KN17_SH3 PF18131.1 NODE_50288_length_366_cov_392.410876_g42390_i0reverse_frame_1 - 0.013 15.6 0.6 0.033 14.3 0.3 1.9 1 1 0 1 1 1 0 KN17 SH3-like C-terminal domain Hrs_helical PF12210.8 NODE_50288_length_366_cov_392.410876_g42390_i0reverse_frame_1 - 0.019 15.5 4.2 0.051 14.1 2.2 2.2 1 1 1 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate SATase_N PF06426.14 NODE_50288_length_366_cov_392.410876_g42390_i0reverse_frame_1 - 0.045 14.1 0.4 0.059 13.8 0.4 1.3 1 0 0 1 1 1 0 Serine acetyltransferase, N-terminal EFhand_Ca_insen PF08726.10 NODE_50288_length_366_cov_392.410876_g42390_i0reverse_frame_1 - 0.11 12.6 1.2 0.11 12.6 0.3 1.5 2 0 0 2 2 2 0 Ca2+ insensitive EF hand Thiolase_C PF02803.18 NODE_50285_length_366_cov_3950.830816_g42387_i0reverse_frame_1 - 0.16 11.7 1.0 0.23 11.1 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain ABC_tran PF00005.27 NODE_50279_length_367_cov_1.222892_g42381_i0forward_frame_3 - 1e-07 32.5 0.0 1.1e-07 32.4 0.0 1.0 1 0 0 1 1 1 1 ABC transporter GtrA PF04138.14 NODE_50278_length_367_cov_1.225904_g42380_i0reverse_frame_2 - 0.075 13.3 4.3 0.095 12.9 4.3 1.1 1 0 0 1 1 1 0 GtrA-like protein PV_NSP1 PF12433.8 NODE_50278_length_367_cov_1.225904_g42380_i0reverse_frame_2 - 0.27 11.6 2.6 1.6 9.1 0.2 2.2 1 1 1 2 2 2 0 Parvovirus non-structural protein 1 SPC25 PF06703.11 NODE_50273_length_367_cov_1.472892_g42375_i0reverse_frame_3 - 0.0099 15.7 0.4 0.012 15.4 0.4 1.1 1 0 0 1 1 1 1 Microsomal signal peptidase 25 kDa subunit (SPC25) LPD24 PF18839.1 NODE_50273_length_367_cov_1.472892_g42375_i0reverse_frame_3 - 0.25 11.6 3.8 2.1 8.7 0.3 2.3 1 1 1 2 2 2 0 Large polyvalent protein associated domain 24 Nucleoside_tran PF01733.18 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_3 - 8.7e-14 51.6 6.1 1.1e-13 51.3 6.1 1.1 1 0 0 1 1 1 1 Nucleoside transporter RexB PF15968.5 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_3 - 0.018 15.5 4.6 0.018 15.5 4.6 2.0 2 1 0 2 2 2 0 Membrane-anchored ion channel, Abi component Foamy_virus_ENV PF03408.14 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_3 - 0.33 8.7 2.2 0.4 8.5 2.2 1.1 1 0 0 1 1 1 0 Foamy virus envelope protein DUF3377 PF11857.8 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_3 - 0.57 10.1 2.5 2.1 8.3 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF3377) DUF2985 PF11204.8 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_3 - 3.5 7.8 8.4 1.5 9.0 0.3 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2985) 2TM PF13239.6 NODE_50273_length_367_cov_1.472892_g42375_i0forward_frame_3 - 4.8 7.6 7.5 2.1e+02 2.3 6.8 2.1 1 1 0 1 1 1 0 2TM domain MFS_1 PF07690.16 NODE_50272_length_367_cov_1.680723_g42374_i0forward_frame_3 - 1.6e-07 30.6 0.1 1.9e-07 30.3 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Adhesin_Dr PF04619.12 NODE_50270_length_367_cov_1.765060_g42372_i0reverse_frame_3 - 0.012 15.5 1.2 0.016 15.1 1.2 1.1 1 0 0 1 1 1 0 Dr-family adhesin Spc7_N PF15402.6 NODE_50269_length_367_cov_1.786145_g42371_i0reverse_frame_3 - 3.7 5.7 10.3 4.3 5.5 10.3 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 ING PF12998.7 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.022 15.3 1.9 0.022 15.3 1.9 1.9 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding Peptidase_S66C PF17676.1 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.1 13.1 0.1 0.14 12.7 0.1 1.3 1 0 0 1 1 1 0 LD-carboxypeptidase C-terminal domain CSTF2_hinge PF14327.6 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.1 13.0 1.3 0.13 12.7 0.3 1.6 2 0 0 2 2 2 0 Hinge domain of cleavage stimulation factor subunit 2 DUF3236 PF11576.8 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.17 11.6 1.7 0.21 11.3 0.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3236) DUF745 PF05335.13 NODE_50264_length_367_cov_1.927711_g42366_i0reverse_frame_3 - 0.19 11.5 4.2 0.23 11.2 4.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF745) DUF4844 PF16133.5 NODE_50263_length_367_cov_1.939759_g42365_i0reverse_frame_2 - 0.061 13.9 0.2 0.1 13.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4844) NB-ARC PF00931.22 NODE_50263_length_367_cov_1.939759_g42365_i0reverse_frame_2 - 0.087 12.0 0.0 0.098 11.8 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain OST-HTH PF12872.7 NODE_50263_length_367_cov_1.939759_g42365_i0reverse_frame_2 - 0.093 12.6 0.0 0.37 10.6 0.0 1.9 2 0 0 2 2 2 0 OST-HTH/LOTUS domain FYVE_2 PF02318.16 NODE_50259_length_367_cov_2.201807_g42361_i0forward_frame_3 - 0.31 11.2 7.9 0.43 10.8 7.9 1.2 1 0 0 1 1 1 0 FYVE-type zinc finger ACC_epsilon PF13822.6 NODE_50258_length_367_cov_2.222892_g42360_i0reverse_frame_2 - 0.032 14.9 1.1 0.065 13.9 1.1 1.4 1 0 0 1 1 1 0 Acyl-CoA carboxylase epsilon subunit DUF1870 PF08965.10 NODE_50256_length_367_cov_2.304217_g42358_i0reverse_frame_3 - 0.0048 16.9 0.2 0.0061 16.6 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1870) NPV_P10 PF05531.12 NODE_50256_length_367_cov_2.304217_g42358_i0reverse_frame_2 - 0.18 12.3 2.4 1.5 9.4 0.3 2.2 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 NODE_50256_length_367_cov_2.304217_g42358_i0reverse_frame_2 - 6 7.6 8.9 49 4.6 8.9 2.0 1 1 0 1 1 1 0 Initiation control protein YabA RSN1_TM PF13967.6 NODE_50255_length_367_cov_2.379518_g42357_i0reverse_frame_3 - 4e-09 36.4 1.1 4.7e-09 36.2 1.1 1.1 1 0 0 1 1 1 1 Late exocytosis, associated with Golgi transport Kinesin PF00225.23 NODE_50253_length_367_cov_2.481928_g42355_i0reverse_frame_2 - 1.5e-30 106.3 0.1 1.9e-30 106.0 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain LRR_9 PF14580.6 NODE_50251_length_367_cov_2.768072_g42353_i0reverse_frame_2 - 0.015 14.8 0.1 0.019 14.5 0.1 1.1 1 0 0 1 1 1 0 Leucine-rich repeat PRKCSH-like PF12999.7 NODE_50248_length_367_cov_3.313253_g42350_i0reverse_frame_2 - 0.14 11.9 7.2 0.2 11.4 7.2 1.2 1 0 0 1 1 1 0 Glucosidase II beta subunit-like DUF1732 PF08340.11 NODE_50248_length_367_cov_3.313253_g42350_i0forward_frame_2 - 0.11 12.5 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1732) Romo1 PF10247.9 NODE_50247_length_367_cov_3.885542_g42349_i0reverse_frame_2 - 0.01 16.2 0.4 0.017 15.4 0.4 1.3 1 0 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 UPF0506 PF11703.8 NODE_50245_length_367_cov_9.475904_g42348_i0reverse_frame_3 - 1.5 9.2 11.1 0.79 10.1 6.2 2.2 2 0 0 2 2 2 0 UPF0506 Decorin_bind PF02352.15 NODE_50244_length_367_cov_19.355422_g42347_i0forward_frame_2 - 0.06 13.6 0.0 0.065 13.5 0.0 1.1 1 0 0 1 1 1 0 Decorin binding protein BRCT PF00533.26 NODE_50239_length_367_cov_47.472892_g42342_i0forward_frame_3 - 0.01 16.2 0.9 0.019 15.3 0.9 1.5 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain Papilloma_E5A PF05776.12 NODE_50238_length_367_cov_59.756024_g42341_i0reverse_frame_2 - 8 6.9 13.0 0.26 11.7 4.0 2.3 1 1 1 2 2 2 0 Papillomavirus E5A protein zf-RING_2 PF13639.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 1.5e-10 41.3 2.2 2.1e-10 40.8 2.2 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 1.9e-08 33.9 3.6 4.7e-08 32.6 3.6 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 1.4e-07 31.3 0.3 3.3e-07 30.1 0.3 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 1.4e-07 31.7 3.3 3.4e-07 30.4 3.3 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 1.7e-07 31.1 3.7 2.9e-07 30.4 3.7 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 2.2e-06 27.5 0.7 3.5e-06 26.9 0.7 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 8.2e-06 25.6 1.9 1.4e-05 24.9 1.9 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 2.1e-05 24.3 0.4 3.1e-05 23.7 0.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 3.3e-05 23.4 2.0 5.6e-05 22.7 2.0 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 3.7e-05 23.5 3.3 0.00013 21.8 3.3 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 0.0012 18.9 1.4 0.0018 18.3 1.4 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 0.0026 17.9 3.9 0.02 15.0 3.9 2.1 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING RINGv PF12906.7 NODE_50238_length_367_cov_59.756024_g42341_i0forward_frame_3 - 0.045 13.9 0.8 0.12 12.5 0.8 1.7 1 1 0 1 1 1 0 RING-variant domain FAM76 PF16046.5 NODE_50237_length_367_cov_60.596386_g42340_i0forward_frame_3 - 0.43 9.9 7.2 0.49 9.7 7.2 1.0 1 0 0 1 1 1 0 FAM76 protein FabA PF07977.13 NODE_50236_length_367_cov_63.623494_g42339_i0forward_frame_3 - 0.046 13.4 0.1 0.059 13.0 0.1 1.2 1 0 0 1 1 1 0 FabA-like domain Dsh_C PF12316.8 NODE_50236_length_367_cov_63.623494_g42339_i0forward_frame_2 - 0.2 12.0 1.0 0.25 11.7 1.0 1.1 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal GCV_T_C PF08669.11 NODE_50232_length_367_cov_69.472892_g42335_i0reverse_frame_2 - 0.02 14.8 0.0 0.056 13.4 0.0 1.7 1 1 1 2 2 2 0 Glycine cleavage T-protein C-terminal barrel domain FR47 PF08445.10 NODE_50225_length_367_cov_83.177711_g42328_i0reverse_frame_2 - 0.016 15.2 0.0 0.024 14.6 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein RadC PF04002.15 NODE_50225_length_367_cov_83.177711_g42328_i0forward_frame_3 - 0.16 11.9 0.1 0.25 11.3 0.1 1.2 1 0 0 1 1 1 0 RadC-like JAB domain TEBP_beta PF07404.11 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 0.039 13.3 3.9 0.045 13.1 3.9 1.0 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) BUD22 PF09073.10 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 0.32 10.3 14.4 0.37 10.1 14.4 1.0 1 0 0 1 1 1 0 BUD22 Nop14 PF04147.12 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 2.9 6.0 12.2 3.3 5.8 12.2 1.0 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 4.1 5.6 8.9 4.9 5.3 8.9 1.0 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 NODE_50224_length_367_cov_83.638554_g42327_i0reverse_frame_2 - 5.2 6.8 10.3 6.5 6.5 10.3 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Ubiquitin_2 PF14560.6 NODE_50220_length_367_cov_91.394578_g42323_i0reverse_frame_2 - 0.057 13.9 1.2 0.075 13.5 0.1 1.8 2 0 0 2 2 2 0 Ubiquitin-like domain SCRG1 PF15224.6 NODE_50216_length_367_cov_94.900602_g42319_i0reverse_frame_2 - 0.026 14.6 0.0 0.043 13.9 0.0 1.4 1 0 0 1 1 1 0 Scrapie-responsive protein 1 EPF PF17181.4 NODE_50213_length_367_cov_102.403614_g42316_i0reverse_frame_3 - 0.068 13.2 3.5 0.12 12.3 3.5 1.5 1 0 0 1 1 1 0 Epidermal patterning factor proteins RNHCP PF12647.7 NODE_50213_length_367_cov_102.403614_g42316_i0reverse_frame_2 - 0.16 11.9 6.4 0.22 11.5 6.4 1.2 1 0 0 1 1 1 0 RNHCP domain SWIM PF04434.17 NODE_50211_length_367_cov_108.171687_g42314_i0reverse_frame_2 - 0.13 12.0 1.4 0.31 10.8 0.3 2.1 2 0 0 2 2 2 0 SWIM zinc finger RCC1_2 PF13540.6 NODE_50209_length_367_cov_117.900602_g42312_i0reverse_frame_3 - 0.015 15.1 0.1 0.031 14.1 0.1 1.6 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat SIS_2 PF13580.6 NODE_50209_length_367_cov_117.900602_g42312_i0reverse_frame_3 - 0.057 13.4 0.1 0.079 13.0 0.1 1.2 1 0 0 1 1 1 0 SIS domain NDUF_B5 PF09781.9 NODE_50207_length_367_cov_134.737952_g42310_i0reverse_frame_3 - 0.097 12.3 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit PsaF PF17550.2 NODE_50205_length_367_cov_185.292169_g42308_i0forward_frame_3 - 0.45 10.0 2.6 0.65 9.5 2.6 1.2 1 0 0 1 1 1 0 Family of unknown function DUF2671 PF10877.8 NODE_50200_length_367_cov_3293.250000_g36700_i3reverse_frame_2 - 0.015 15.1 0.7 0.033 14.0 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) CART PF06373.11 NODE_50196_length_368_cov_1.510511_g42302_i0reverse_frame_2 - 0.072 13.3 0.4 0.15 12.3 0.4 1.4 1 0 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) Pepdidase_M14_N PF18027.1 NODE_50196_length_368_cov_1.510511_g42302_i0forward_frame_2 - 0.0071 16.7 0.0 0.012 15.9 0.0 1.4 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain DUF1391 PF07151.12 NODE_50194_length_368_cov_1.612613_g42300_i0reverse_frame_2 - 1.6e-12 47.0 5.5 1.6e-12 47.0 5.5 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1391) SieB PF14163.6 NODE_50194_length_368_cov_1.612613_g42300_i0forward_frame_3 - 2.1e-15 56.5 0.0 2.4e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Super-infection exclusion protein B Chitin_synth_1N PF08407.11 NODE_50194_length_368_cov_1.612613_g42300_i0forward_frame_3 - 0.0086 16.0 0.0 0.013 15.5 0.0 1.2 1 0 0 1 1 1 1 Chitin synthase N-terminal DUF809 PF05663.11 NODE_50193_length_368_cov_1.642643_g42299_i0forward_frame_2 - 0.52 10.4 4.8 0.099 12.8 0.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF809) PHZA_PHZB PF03284.13 NODE_50190_length_368_cov_1.921922_g42296_i0forward_frame_2 - 0.13 11.9 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Phenazine biosynthesis protein A/B AAA-ATPase_like PF09820.9 NODE_50187_length_368_cov_2.150150_g42293_i0reverse_frame_3 - 0.077 12.4 1.2 0.1 12.0 1.2 1.1 1 0 0 1 1 1 0 Predicted AAA-ATPase zf-RING_2 PF13639.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 7.4e-10 39.0 9.8 1e-09 38.5 9.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 4.3e-07 30.1 10.3 9.8e-07 29.0 10.3 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 6.2e-05 22.8 10.0 0.00012 21.9 10.0 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 9.5e-05 22.1 5.5 0.00019 21.1 5.5 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.00031 20.7 5.5 0.00071 19.6 5.5 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.0011 18.8 12.4 0.02 14.8 12.4 2.2 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.0016 18.2 7.4 0.0024 17.7 7.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.0073 16.5 8.7 0.021 15.0 8.7 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain Baculo_RING PF05883.11 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.031 14.3 1.2 0.049 13.6 1.2 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-Di19 PF05605.12 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.037 14.3 2.5 1.2 9.4 0.6 2.6 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding zf-RING_5 PF14634.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.087 12.8 8.3 0.17 11.8 8.4 1.5 1 1 0 1 1 1 0 zinc-RING finger domain RINGv PF12906.7 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.45 10.7 10.2 0.74 10.0 10.2 1.3 1 0 0 1 1 1 0 RING-variant domain zf-RING_UBOX PF13445.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 0.49 10.5 7.0 0.95 9.5 7.0 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_4 PF14570.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 2 8.2 8.5 1.7 8.5 0.8 2.6 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 NODE_50186_length_368_cov_2.249249_g42292_i0forward_frame_3 - 3.2 8.0 8.7 1.2 9.4 1.0 2.4 1 1 0 2 2 2 0 zinc finger of C3HC4-type, RING BiPBP_C PF06832.12 NODE_50184_length_368_cov_2.405405_g42290_i0reverse_frame_3 - 6e-07 29.4 0.0 8.3e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 Penicillin-Binding Protein C-terminus Family FliH PF02108.16 NODE_50181_length_368_cov_2.687688_g42287_i0reverse_frame_2 - 0.11 12.6 0.3 0.13 12.4 0.3 1.2 1 0 0 1 1 1 0 Flagellar assembly protein FliH DAGK_cat PF00781.24 NODE_50181_length_368_cov_2.687688_g42287_i0reverse_frame_2 - 0.22 11.2 0.3 0.31 10.7 0.3 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain DUF2632 PF10943.8 NODE_50181_length_368_cov_2.687688_g42287_i0forward_frame_3 - 0.024 14.2 5.8 0.029 13.9 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2632) ADH_zinc_N PF00107.26 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 2.9e-13 49.9 0.0 3.8e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 9.6e-07 28.3 0.0 1.2e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.00051 19.5 0.0 0.0006 19.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ETF PF01012.21 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.013 15.3 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 Electron transfer flavoprotein domain ADH_zinc_N_2 PF13602.6 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.017 16.2 0.0 0.025 15.6 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding dehydrogenase NAD_binding_2 PF03446.15 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.033 14.3 0.0 0.038 14.2 0.0 1.1 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_10 PF13460.6 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.09 12.7 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.092 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ThiF PF00899.21 NODE_50179_length_368_cov_3.159159_g42285_i0reverse_frame_3 - 0.79 9.0 2.9 1.1 8.6 1.8 1.7 1 1 1 2 2 2 0 ThiF family DiS_P_DiS PF06750.13 NODE_50174_length_368_cov_4.156156_g42280_i0forward_frame_2 - 0.08 13.1 6.1 2.5 8.3 1.3 2.2 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain MOR2-PAG1_mid PF14228.6 NODE_50173_length_368_cov_4.324324_g42279_i0reverse_frame_2 - 0.061 11.0 0.1 0.076 10.6 0.1 1.0 1 0 0 1 1 1 0 Cell morphogenesis central region VATC PF18716.1 NODE_50172_length_368_cov_4.807808_g42278_i0reverse_frame_3 - 0.074 12.9 2.2 0.074 12.9 2.2 1.8 2 0 0 2 2 2 0 Vms1-associating treble clef domain Cullin_Nedd8 PF10557.9 NODE_50166_length_368_cov_59.207207_g42272_i0forward_frame_3 - 0.00048 20.1 1.3 0.42 10.7 0.1 2.3 2 1 0 2 2 2 2 Cullin protein neddylation domain SusD-like_3 PF14322.6 NODE_50166_length_368_cov_59.207207_g42272_i0forward_frame_2 - 0.05 13.9 0.0 0.056 13.8 0.0 1.1 1 0 0 1 1 1 0 Starch-binding associating with outer membrane Rsc14 PF08586.10 NODE_50165_length_368_cov_64.231231_g42271_i0reverse_frame_2 - 0.01 16.6 0.5 0.037 14.8 0.1 1.9 2 0 0 2 2 2 0 RSC complex, Rsc14/Ldb7 subunit FA_desaturase PF00487.24 NODE_50165_length_368_cov_64.231231_g42271_i0forward_frame_3 - 0.73 9.6 10.0 0.94 9.3 10.0 1.1 1 0 0 1 1 1 0 Fatty acid desaturase SHIPPO-rpt PF07004.12 NODE_50164_length_368_cov_65.798799_g42270_i0forward_frame_3 - 0.084 13.8 0.1 0.084 13.8 0.1 3.6 4 0 0 4 4 4 0 Sperm-tail PG-rich repeat MPS-4 PF17523.2 NODE_50163_length_368_cov_66.477477_g42269_i0forward_frame_2 - 1.5 9.0 8.1 6.1 7.1 1.7 2.2 1 1 1 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Josephin PF02099.17 NODE_50153_length_368_cov_81.969970_g42259_i0reverse_frame_3 - 0.018 15.2 0.0 0.023 14.8 0.0 1.2 1 0 0 1 1 1 0 Josephin Methyltransf_34 PF11312.8 NODE_50152_length_368_cov_84.612613_g42258_i0reverse_frame_2 - 0.0048 16.2 2.0 0.0056 16.0 2.0 1.1 1 0 0 1 1 1 1 Putative SAM-dependent methyltransferase GNT-I PF03071.15 NODE_50152_length_368_cov_84.612613_g42258_i0reverse_frame_2 - 0.14 10.9 4.1 0.14 10.9 4.1 1.0 1 0 0 1 1 1 0 GNT-I family Mobilization_B PF17511.2 NODE_50152_length_368_cov_84.612613_g42258_i0reverse_frame_2 - 1.3 9.4 12.5 1.6 9.1 12.5 1.2 1 0 0 1 1 1 0 Mobilization protein B zf-C3H2C3 PF17122.5 NODE_50151_length_368_cov_84.633634_g42257_i0reverse_frame_2 - 0.13 12.3 8.6 0.25 11.4 0.1 3.4 3 0 0 3 3 3 0 Zinc-finger Dppa2_A PF14049.6 NODE_50151_length_368_cov_84.633634_g42257_i0forward_frame_2 - 0.12 12.6 0.3 0.12 12.6 0.3 1.7 2 0 0 2 2 2 0 Dppa2/4 conserved region in higher vertebrates RPA43_OB PF17875.1 NODE_50148_length_368_cov_87.789790_g42254_i0reverse_frame_2 - 0.039 14.6 4.9 0.078 13.6 4.9 1.5 1 1 0 1 1 1 0 RPA43 OB domain in RNA Pol I SMC_N PF02463.19 NODE_50147_length_368_cov_89.528529_g42253_i0reverse_frame_3 - 0.01 15.3 0.4 0.014 14.8 0.4 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain PAN_1 PF00024.26 NODE_50145_length_368_cov_90.402402_g42251_i0forward_frame_3 - 0.014 15.4 0.8 0.02 14.9 0.8 1.4 1 0 0 1 1 1 0 PAN domain DUF1039 PF06287.11 NODE_50143_length_368_cov_108.366366_g42249_i0reverse_frame_3 - 0.028 14.9 0.4 0.13 12.7 0.0 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1039) HIGH_NTase1 PF05636.11 NODE_50143_length_368_cov_108.366366_g42249_i0reverse_frame_2 - 0.19 10.9 0.0 0.2 10.8 0.0 1.0 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase Evr1_Alr PF04777.13 NODE_50141_length_368_cov_136.039039_g42247_i0reverse_frame_3 - 0.00024 21.5 0.0 0.00034 21.0 0.0 1.3 1 0 0 1 1 1 1 Erv1 / Alr family Gal_Lectin PF02140.18 NODE_50141_length_368_cov_136.039039_g42247_i0forward_frame_3 - 0.066 13.6 0.4 0.11 12.9 0.0 1.5 2 0 0 2 2 2 0 Galactose binding lectin domain C4bp_oligo PF18453.1 NODE_50134_length_368_cov_279.912913_g42240_i0reverse_frame_3 - 0.015 15.5 0.0 0.027 14.6 0.0 1.5 1 0 0 1 1 1 0 Oligomerization domain of C4b-binding protein alpha DUF5124 PF17160.4 NODE_50124_length_369_cov_1.170659_g42230_i0forward_frame_3 - 0.14 13.0 0.3 0.23 12.3 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5124) DUF2639 PF11121.8 NODE_50122_length_369_cov_1.251497_g42228_i0forward_frame_2 - 0.16 12.0 0.1 0.27 11.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2639) CPSF73-100_C PF11718.8 NODE_50121_length_369_cov_1.302395_g42227_i0forward_frame_3 - 5e-12 45.8 0.5 5.9e-12 45.6 0.5 1.0 1 0 0 1 1 1 1 Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks215.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks215.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks215.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks215.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:09:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1158 PF06643.11 NODE_50117_length_369_cov_1.461078_g42223_i0reverse_frame_2 - 0.086 13.4 1.4 0.14 12.7 1.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1158) DUF3397 PF11877.8 NODE_50114_length_369_cov_1.646707_g42220_i0reverse_frame_2 - 0.091 13.0 5.6 0.063 13.5 4.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3397) UPF0370 PF13980.6 NODE_50114_length_369_cov_1.646707_g42220_i0reverse_frame_2 - 0.26 11.3 0.6 0.76 9.9 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0370) DUF2417 PF10329.9 NODE_50114_length_369_cov_1.646707_g42220_i0reverse_frame_2 - 2.2 7.7 8.0 3.6 6.9 8.0 1.4 1 1 0 1 1 1 0 Region of unknown function (DUF2417) TMF_DNA_bd PF12329.8 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.00019 21.4 8.6 0.00019 21.4 8.6 2.3 1 1 1 2 2 2 1 TATA element modulatory factor 1 DNA binding KASH_CCD PF14662.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.0016 18.3 17.3 0.0054 16.6 17.2 1.8 1 1 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DUF2312 PF10073.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.01 15.5 2.6 0.056 13.1 2.7 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) IES5 PF17335.2 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.012 15.8 2.2 0.012 15.8 2.2 1.9 1 1 1 2 2 2 0 Ino80 complex subunit 5 YabA PF06156.13 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.019 15.6 17.1 0.46 11.2 10.2 3.0 1 1 1 2 2 2 0 Initiation control protein YabA ZapB PF06005.12 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.021 15.3 25.7 2.4 8.7 18.9 3.3 1 1 1 2 2 2 0 Cell division protein ZapB UPF0449 PF15136.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.021 15.3 6.2 0.021 15.3 6.2 2.2 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.026 14.6 16.2 0.18 11.9 6.4 3.3 1 1 1 3 3 3 0 bZIP transcription factor DUF4201 PF13870.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.033 13.9 13.9 0.14 11.9 3.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) TSC22 PF01166.18 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.047 14.0 15.4 1.8 9.0 0.7 3.8 1 1 3 4 4 3 0 TSC-22/dip/bun family DegS PF05384.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.048 13.1 12.7 0.061 12.8 12.7 1.2 1 0 0 1 1 1 0 Sensor protein DegS Cep57_CLD_2 PF14197.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.05 13.7 20.0 1.2 9.3 0.7 3.9 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 DUF1664 PF07889.12 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.088 12.8 5.7 0.11 12.6 5.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) NYD-SP28_assoc PF14775.6 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.092 12.9 9.1 12 6.1 0.2 3.7 2 1 1 3 3 3 0 Sperm tail C-terminal domain TMPIT PF07851.13 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.094 11.9 7.9 0.13 11.5 7.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein ADIP PF11559.8 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.11 12.6 19.4 0.059 13.5 14.6 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Shugoshin_N PF07558.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.11 12.4 12.9 0.31 10.9 0.9 3.8 2 1 1 3 3 3 0 Shugoshin N-terminal coiled-coil region HALZ PF02183.18 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.13 12.5 17.3 0.24 11.6 3.2 3.3 4 0 0 4 4 3 0 Homeobox associated leucine zipper MCC-bdg_PDZ PF10506.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.15 12.1 8.4 3.9 7.5 0.2 3.2 3 1 0 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Jnk-SapK_ap_N PF09744.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.18 12.0 20.6 0.13 12.5 13.7 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DUF724 PF05266.14 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.2 11.5 10.7 0.11 12.4 7.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DUF3450 PF11932.8 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.21 10.9 16.7 0.36 10.1 16.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) HMMR_N PF15905.5 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.27 10.7 18.9 0.31 10.5 18.9 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Syntaxin-6_N PF09177.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.27 11.8 9.7 1.8 9.1 9.6 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DivIC PF04977.15 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.3 10.9 27.0 0.56 10.0 6.4 4.0 1 1 3 4 4 4 0 Septum formation initiator FlaC_arch PF05377.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.31 11.4 7.9 1.2 9.6 0.9 3.2 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Cnn_1N PF07989.11 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.32 11.2 17.2 1.3 9.2 10.5 3.2 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 FUSC PF04632.12 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 0.54 8.7 3.5 0.6 8.6 3.5 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family KLRAQ PF10205.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.1 9.5 15.2 0.13 12.5 9.0 2.0 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein APG6_N PF17675.1 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.3 9.6 21.0 0.18 12.4 14.8 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region bZIP_2 PF07716.15 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.4 9.0 26.0 0.59 10.3 3.1 4.6 3 1 3 6 6 6 0 Basic region leucine zipper JIP_LZII PF16471.5 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.6 9.0 19.2 0.83 9.9 5.6 3.0 1 1 2 3 3 3 0 JNK-interacting protein leucine zipper II NRBF2 PF08961.10 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 1.8 8.1 15.5 0.5 9.9 7.1 2.2 1 1 0 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator MctB PF11382.8 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 2.1 8.0 10.1 1.1 8.9 2.6 2.3 2 1 0 2 2 2 0 Copper transport outer membrane protein, MctB DASH_Dam1 PF08653.10 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 2.2 8.2 8.4 8.3 6.3 0.6 2.8 1 1 2 3 3 3 0 DASH complex subunit Dam1 Atg14 PF10186.9 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 2.3 7.2 14.9 3.3 6.7 14.9 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 H-kinase_dim PF02895.14 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 3.2 8.2 10.4 2.1e+02 2.4 10.4 2.5 1 1 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain M PF02370.16 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 4.2 8.2 16.4 4.7 8.1 0.2 4.6 3 2 1 4 4 4 0 M protein repeat FAM76 PF16046.5 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 4.4 6.6 12.2 5.5 6.2 12.2 1.2 1 0 0 1 1 1 0 FAM76 protein GIT_CC PF16559.5 NODE_50112_length_369_cov_1.772455_g42218_i0forward_frame_3 - 6 6.8 23.9 1.1 9.2 2.5 3.6 1 1 3 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor ArgoN PF16486.5 NODE_50111_length_369_cov_1.808383_g42217_i0reverse_frame_3 - 0.0097 16.5 0.1 0.011 16.3 0.1 1.1 1 0 0 1 1 1 1 N-terminal domain of argonaute McrBC PF10117.9 NODE_50111_length_369_cov_1.808383_g42217_i0reverse_frame_3 - 0.017 14.2 0.1 0.02 14.0 0.1 1.1 1 0 0 1 1 1 0 McrBC 5-methylcytosine restriction system component RRM_4 PF10598.9 NODE_50111_length_369_cov_1.808383_g42217_i0forward_frame_3 - 0.081 13.3 0.0 0.14 12.5 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif of the spliceosomal PrP8 DASH_Spc34 PF08657.10 NODE_50107_length_369_cov_2.107784_g42213_i0forward_frame_2 - 0.045 13.6 0.1 0.08 12.7 0.1 1.4 2 0 0 2 2 2 0 DASH complex subunit Spc34 Mucin PF01456.17 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.0052 16.8 41.0 0.007 16.4 41.0 1.3 1 0 0 1 1 1 1 Mucin-like glycoprotein NPR3 PF03666.13 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.0094 14.8 5.3 0.0086 14.9 5.3 1.0 1 0 0 1 1 1 1 Nitrogen Permease regulator of amino acid transport activity 3 DUF4614 PF15391.6 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.12 12.4 22.6 0.14 12.2 22.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) MGC-24 PF05283.11 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.27 11.7 24.2 0.37 11.3 24.2 1.2 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin SPX PF03105.19 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.48 10.3 12.3 0.49 10.2 12.3 1.1 1 0 0 1 1 1 0 SPX domain DUF3684 PF12449.8 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 0.84 7.3 9.4 0.93 7.2 9.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3684) DAG_kinase_N PF14513.6 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 1.3 9.2 5.9 1.7 8.9 5.9 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus Apt1 PF10351.9 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 2 7.2 13.9 2 7.2 13.9 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain FSA_C PF10479.9 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 2 6.4 27.2 2.1 6.3 27.2 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus ASD2 PF08687.11 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 2.7 7.5 4.2 3 7.3 4.2 1.1 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 RIFIN PF02009.16 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 4.4 7.1 10.1 5.6 6.8 10.1 1.1 1 0 0 1 1 1 0 Rifin Macoilin PF09726.9 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 4.7 5.6 12.2 4.6 5.7 12.2 1.0 1 0 0 1 1 1 0 Macoilin family Otopetrin PF03189.13 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 5.5 5.7 9.1 6.3 5.5 9.1 1.0 1 0 0 1 1 1 0 Otopetrin Sec10 PF07393.11 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 6.1 5.1 11.7 6.9 4.9 11.7 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec10 MPM1 PF17234.2 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 6.7 6.9 11.7 8.7 6.6 11.7 1.1 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 Sec3_C PF09763.9 NODE_50103_length_369_cov_2.266467_g42209_i0reverse_frame_3 - 9.4 4.5 9.1 11 4.3 9.1 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec3 OPT PF03169.15 NODE_50103_length_369_cov_2.266467_g42209_i0forward_frame_3 - 0.69 8.5 12.2 0.78 8.3 12.2 1.1 1 0 0 1 1 1 0 OPT oligopeptide transporter protein Anoctamin PF04547.12 NODE_50103_length_369_cov_2.266467_g42209_i0forward_frame_3 - 2.6 6.8 7.8 3.2 6.5 7.8 1.3 1 0 0 1 1 1 0 Calcium-activated chloride channel KRTAP PF11759.8 NODE_50103_length_369_cov_2.266467_g42209_i0forward_frame_2 - 1.6 9.4 19.9 0.34 11.5 14.8 2.0 2 0 0 2 2 2 0 Keratin-associated matrix SR-25 PF10500.9 NODE_50103_length_369_cov_2.266467_g42209_i0forward_frame_2 - 5 6.7 15.3 7.5 6.1 15.3 1.4 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Peptidase_M16_C PF05193.21 NODE_50100_length_369_cov_2.556886_g42206_i0reverse_frame_3 - 9.1e-08 32.3 0.1 1e-07 32.1 0.1 1.0 1 0 0 1 1 1 1 Peptidase M16 inactive domain Cyt_bd_oxida_I PF01654.17 NODE_50094_length_369_cov_3.167665_g42200_i0reverse_frame_3 - 0.13 10.8 0.2 0.18 10.4 0.2 1.1 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit I DUF2013 PF09431.10 NODE_50094_length_369_cov_3.167665_g42200_i0forward_frame_3 - 0.091 12.9 0.6 0.46 10.7 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2013) Centro_C10orf90 PF17730.1 NODE_50094_length_369_cov_3.167665_g42200_i0forward_frame_3 - 0.26 10.0 0.9 0.31 9.8 0.9 1.1 1 0 0 1 1 1 0 Centrosomal C10orf90 Mitoc_L55 PF09776.9 NODE_50092_length_369_cov_3.736527_g42198_i0reverse_frame_3 - 0.089 12.5 2.3 0.58 9.9 0.2 2.4 1 1 2 3 3 3 0 Mitochondrial ribosomal protein L55 Mitoc_L55 PF09776.9 NODE_50092_length_369_cov_3.736527_g42198_i0reverse_frame_2 - 0.16 11.7 2.5 0.36 10.6 2.4 1.8 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L55 COX8 PF02285.15 NODE_50092_length_369_cov_3.736527_g42198_i0forward_frame_3 - 1.4 8.9 8.1 4.4 7.3 2.2 2.6 2 0 0 2 2 2 0 Cytochrome oxidase c subunit VIII Med19 PF10278.9 NODE_50089_length_369_cov_32.410180_g42195_i0forward_frame_3 - 0.073 13.0 0.1 0.077 12.9 0.1 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 LRR_12 PF18837.1 NODE_50083_length_369_cov_51.790419_g42189_i0reverse_frame_3 - 0.035 13.8 1.3 0.071 12.8 1.3 1.5 1 0 0 1 1 1 0 Leucine-rich repeat UPF0370 PF13980.6 NODE_50083_length_369_cov_51.790419_g42189_i0reverse_frame_2 - 0.13 12.3 0.1 0.36 10.9 0.0 1.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0370) NUDE_C PF04880.13 NODE_50078_length_369_cov_73.649701_g42184_i0reverse_frame_3 - 0.21 12.1 3.3 0.24 11.9 3.3 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Mucin PF01456.17 NODE_50078_length_369_cov_73.649701_g42184_i0reverse_frame_2 - 0.076 13.0 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein RGS12_us2 PF16611.5 NODE_50076_length_369_cov_76.000000_g42182_i0forward_frame_2 - 0.11 12.9 0.2 0.21 12.0 0.2 1.4 1 0 0 1 1 1 0 Unstructured region between RBD and GoLoco DUF5375 PF17345.2 NODE_50075_length_369_cov_76.473054_g42181_i0forward_frame_3 - 0.15 11.9 1.1 0.24 11.3 1.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5375) TCTP PF00838.17 NODE_50075_length_369_cov_76.473054_g42181_i0forward_frame_2 - 0.015 15.7 0.0 0.019 15.3 0.0 1.1 1 0 0 1 1 1 0 Translationally controlled tumour protein DUF4632 PF15451.6 NODE_50071_length_369_cov_81.191617_g42177_i0reverse_frame_3 - 0.2 11.8 0.1 0.2 11.8 0.1 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4632) Corona_M PF01635.18 NODE_50068_length_369_cov_99.688623_g42174_i0forward_frame_2 - 2 7.7 5.4 2.3 7.5 5.4 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein JmjC PF02373.22 NODE_50065_length_369_cov_108.970060_g42171_i0reverse_frame_3 - 4.6e-06 27.0 0.0 6.3e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_4 PF08007.12 NODE_50065_length_369_cov_108.970060_g42171_i0reverse_frame_3 - 0.00011 21.8 0.0 0.00012 21.7 0.0 1.2 1 0 0 1 1 1 1 Cupin superfamily protein Cupin_8 PF13621.6 NODE_50065_length_369_cov_108.970060_g42171_i0reverse_frame_3 - 0.0022 17.8 0.0 0.0027 17.4 0.0 1.1 1 0 0 1 1 1 1 Cupin-like domain HTH_42 PF06224.12 NODE_50065_length_369_cov_108.970060_g42171_i0reverse_frame_3 - 0.023 14.2 1.0 0.028 14.0 1.0 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain RCR PF12273.8 NODE_50065_length_369_cov_108.970060_g42171_i0forward_frame_2 - 0.16 12.6 0.1 0.47 11.1 0.1 1.7 2 0 0 2 2 2 0 Chitin synthesis regulation, resistance to Congo red EBP PF05241.12 NODE_50061_length_369_cov_147.485030_g42167_i0forward_frame_3 - 0.12 11.8 0.5 0.18 11.3 0.5 1.3 1 0 0 1 1 1 0 Emopamil binding protein DUF4483 PF14825.6 NODE_50060_length_369_cov_195.488024_g42166_i0reverse_frame_3 - 0.04 13.7 0.7 0.055 13.2 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4483) DUF5601 PF18151.1 NODE_50060_length_369_cov_195.488024_g42166_i0reverse_frame_3 - 0.063 13.6 0.1 0.13 12.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5601) SIN1 PF05422.12 NODE_50059_length_369_cov_209.649701_g42165_i0reverse_frame_3 - 0.069 13.7 2.3 0.087 13.4 2.3 1.1 1 0 0 1 1 1 0 Stress-activated map kinase interacting protein 1 (SIN1) Popeye PF04831.13 NODE_50059_length_369_cov_209.649701_g42165_i0forward_frame_3 - 1.1 9.4 6.0 1.6 8.9 6.0 1.2 1 0 0 1 1 1 0 Popeye protein conserved region YMF19 PF02326.15 NODE_50058_length_369_cov_211.634731_g42164_i0forward_frame_3 - 0.0065 17.2 0.3 0.011 16.5 0.3 1.4 1 0 0 1 1 1 1 Plant ATP synthase F0 RnaseA PF00074.20 NODE_50058_length_369_cov_211.634731_g42164_i0forward_frame_3 - 0.058 13.8 4.7 2.9 8.3 0.5 2.1 1 1 1 2 2 2 0 Pancreatic ribonuclease zf-LITAF-like PF10601.9 NODE_50054_length_369_cov_445.419162_g42160_i0forward_frame_2 - 3.1e-12 46.6 22.7 4.1e-12 46.2 22.7 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF3239 PF11580.8 NODE_50054_length_369_cov_445.419162_g42160_i0forward_frame_2 - 0.002 18.4 0.4 0.0026 18.1 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3239) DUF5401 PF17380.2 NODE_50054_length_369_cov_445.419162_g42160_i0forward_frame_2 - 0.19 9.8 0.3 0.23 9.5 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) TAP35_44 PF07265.11 NODE_50053_length_369_cov_455.700599_g42159_i0forward_frame_3 - 0.36 10.8 4.4 0.85 9.7 4.4 1.6 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 LEP503 PF15221.6 NODE_50049_length_369_cov_2295.395210_g42155_i0reverse_frame_2 - 1.4 9.3 11.0 1.2 9.5 9.3 1.9 2 1 0 2 2 2 0 Lens epithelial cell protein LEP503 RD3 PF14473.6 ORF99734 - 0.0017 18.2 0.2 0.0022 17.9 0.2 1.2 1 0 0 1 1 1 1 RD3 protein DUF682 PF05081.12 ORF96676 - 0.023 14.4 0.1 0.028 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF682) GRDP-like PF07173.12 ORF96676 - 0.1 13.2 0.0 0.17 12.6 0.0 1.4 1 0 0 1 1 1 0 Glycine-rich domain-containing protein-like UPF0300 PF08594.10 ORF96067 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) Filament_head PF04732.14 ORF95766 - 1.3 9.9 8.9 0.24 12.3 0.8 2.1 2 0 0 2 2 2 0 Intermediate filament head (DNA binding) region DUF3413 PF11893.8 ORF94791 - 0.016 14.4 3.7 0.017 14.3 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) DUF1056 PF06341.11 ORF94791 - 0.086 13.2 7.3 0.57 10.5 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1056) UPF0300 PF08594.10 ORF94120 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) Bud13 PF09736.9 ORF93577 - 0.23 11.9 3.5 0.26 11.6 3.5 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor of RES complex Robl_LC7 PF03259.17 ORF91593 - 1.9e-12 46.8 0.0 2.3e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF4822 PF16103.5 ORF91593 - 0.15 12.4 0.1 0.15 12.4 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4822) SR-25 PF10500.9 ORF91441 - 0.0021 17.7 25.2 0.0024 17.5 25.2 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein Dsh_C PF12316.8 ORF91441 - 0.012 16.1 10.5 0.013 15.9 10.5 1.0 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal DUF966 PF06136.13 ORF91441 - 0.057 13.1 10.3 0.065 12.9 10.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF966) DUF3807 PF12720.7 ORF91441 - 0.073 13.3 17.1 0.09 13.0 17.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) NAM-associated PF14303.6 ORF91441 - 0.12 13.1 20.0 0.13 12.9 20.0 1.1 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain GAGA_bind PF06217.12 ORF91441 - 0.2 11.9 15.6 0.23 11.7 15.6 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family Bul1_C PF04426.12 ORF91441 - 0.27 10.6 5.9 0.27 10.6 5.9 1.2 1 0 0 1 1 1 0 Bul1 C terminus SCP1201-deam PF14428.6 ORF91441 - 0.31 10.9 2.6 0.41 10.5 2.6 1.2 1 0 0 1 1 1 0 SCP1.201-like deaminase Neur_chan_memb PF02932.16 ORF91441 - 0.34 10.9 7.9 0.38 10.8 7.9 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Zip PF02535.22 ORF91441 - 0.6 9.3 8.5 0.61 9.2 8.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter S36_mt PF10937.8 ORF91441 - 0.71 11.5 8.5 1.6 10.4 8.4 1.5 1 1 0 1 1 1 0 Ribosomal protein S36, mitochondrial Gti1_Pac2 PF09729.9 ORF91441 - 0.72 9.9 13.4 0.93 9.6 13.4 1.2 1 0 0 1 1 1 0 Gti1/Pac2 family SpoIIIAH PF12685.7 ORF91441 - 0.81 9.5 14.6 0.96 9.2 14.6 1.1 1 0 0 1 1 1 0 SpoIIIAH-like protein DDHD PF02862.17 ORF91441 - 1.2 9.3 7.8 1.4 9.1 7.8 1.3 1 0 0 1 1 1 0 DDHD domain RR_TM4-6 PF06459.12 ORF91441 - 1.3 8.8 15.5 1.4 8.7 15.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Apt1 PF10351.9 ORF91441 - 1.3 7.8 12.9 1.4 7.7 12.9 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Vfa1 PF08432.10 ORF91441 - 1.4 9.2 19.0 1.7 8.9 19.0 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Presenilin PF01080.17 ORF91441 - 1.8 7.2 12.1 2 7.1 12.1 1.0 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 ORF91441 - 1.8 6.7 16.5 2.1 6.6 16.5 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4614 PF15391.6 ORF91441 - 2.2 8.2 11.2 2.7 8.0 11.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) SLC12 PF03522.15 ORF91441 - 2.8 6.9 11.5 3.2 6.7 11.5 1.0 1 0 0 1 1 1 0 Solute carrier family 12 PPL5 PF18168.1 ORF91441 - 2.9 7.1 10.8 3.2 7.0 10.8 1.1 1 0 0 1 1 1 0 Prim-pol family 5 Band_3_cyto PF07565.13 ORF91441 - 5.5 6.7 8.6 6.2 6.5 8.6 1.1 1 0 0 1 1 1 0 Band 3 cytoplasmic domain EOS1 PF12326.8 ORF91441 - 6.2 6.7 6.6 7.1 6.5 6.6 1.2 1 0 0 1 1 1 0 N-glycosylation protein Connexin PF00029.19 ORF91441 - 8.4 6.1 10.0 11 5.7 10.0 1.4 1 0 0 1 1 1 0 Connexin NPR3 PF03666.13 ORF91441 - 9.3 4.9 16.2 11 4.7 16.2 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 ANAPC_CDC26 PF10471.9 ORF89638 - 1.9e-07 31.8 0.4 3.2e-07 31.1 0.3 1.6 1 1 1 2 2 2 1 Anaphase-promoting complex APC subunit CDC26 SYCP2_ARLD PF18581.1 ORF88192 - 0.0063 16.5 0.4 0.0085 16.1 0.4 1.2 1 0 0 1 1 1 1 Synaptonemal complex 2 armadillo-repeat-like domain DUF3694 PF12473.8 ORF8809 - 0.068 13.8 0.0 0.08 13.6 0.0 1.1 1 0 0 1 1 1 0 Kinesin protein AAA_25 PF13481.6 ORF88076 - 0.14 11.7 0.2 0.26 10.8 0.2 1.4 1 0 0 1 1 1 0 AAA domain ubiquitin PF00240.23 ORF877 - 7e-34 115.4 0.3 8.3e-34 115.2 0.3 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF877 - 8.9e-16 57.5 0.7 1.1e-15 57.3 0.7 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF877 - 3.6e-05 24.1 0.1 0.00013 22.3 0.1 1.7 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF877 - 0.005 16.7 0.0 0.0063 16.4 0.0 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF877 - 0.0068 16.7 0.0 0.0086 16.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF877 - 0.013 15.5 0.0 0.028 14.5 0.0 1.5 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 ORF877 - 0.025 14.6 1.1 6.1 7.0 0.0 2.1 2 0 0 2 2 2 0 Ubiquitin-like domain DUF2407 PF10302.9 ORF877 - 0.059 13.9 0.1 0.077 13.6 0.1 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF877 - 0.15 11.9 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain TMEM43 PF07787.12 ORF877 - 0.34 10.2 1.2 0.45 9.9 1.1 1.3 1 1 0 1 1 1 0 Transmembrane protein 43 DSBA PF01323.20 ORF86485 - 0.017 14.9 0.2 0.022 14.5 0.2 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Bax1-I PF01027.20 ORF86462 - 5.2e-07 29.7 6.3 6.3e-07 29.4 6.3 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 FtsX PF02687.21 ORF85720 - 0.024 15.1 1.1 0.024 15.1 1.1 2.1 2 1 0 2 2 2 0 FtsX-like permease family Gluconate_2-dh3 PF13618.6 ORF85540 - 0.0097 16.1 0.2 0.011 16.0 0.2 1.3 1 0 0 1 1 1 1 Gluconate 2-dehydrogenase subunit 3 SAM_2 PF07647.17 ORF85540 - 0.044 13.9 0.1 0.067 13.3 0.1 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF2508 PF10704.9 ORF85540 - 0.059 13.6 1.6 0.11 12.7 1.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2508) S-antigen PF05756.11 ORF85540 - 1.7 9.1 7.1 3.2 8.2 6.9 1.7 1 1 0 1 1 1 0 S-antigen protein APG6 PF04111.12 ORF85391 - 0.03 14.3 0.2 0.033 14.1 0.2 1.1 1 0 0 1 1 1 0 Apg6 BARA domain DM4_12 PF07841.13 ORF84164 - 0.024 15.3 0.4 0.035 14.8 0.4 1.3 1 0 0 1 1 1 0 DM4/DM12 family C9orf72-like PF15019.6 ORF83568 - 0.0047 16.5 0.0 0.0059 16.2 0.0 1.1 1 0 0 1 1 1 1 C9orf72-like protein family DUF3525 PF12039.8 ORF82026 - 0.31 9.7 1.5 0.38 9.4 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3525) CPBP PF02517.16 ORF80583 - 0.076 13.4 1.1 0.11 12.9 1.1 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease adh_short_C2 PF13561.6 ORF80359 - 6.3e-30 104.5 0.2 6.6e-30 104.4 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF80359 - 2e-17 63.3 0.1 2.7e-17 62.8 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase Notch PF00066.17 ORF79522 - 0.82 10.2 0.2 0.82 10.2 0.2 3.0 3 0 0 3 3 3 0 LNR domain Kelch_4 PF13418.6 ORF79443 - 2e-10 40.5 0.5 0.0002 21.3 0.0 2.4 2 1 0 2 2 2 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF79443 - 6.8e-08 32.5 0.6 0.00032 20.9 0.1 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 ORF79443 - 1.5e-06 28.0 1.4 0.0099 15.8 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 ORF79443 - 7.6e-05 22.5 1.8 0.0069 16.3 0.3 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 ORF79443 - 0.0018 18.5 0.2 0.011 15.9 0.1 2.1 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF79443 - 0.022 14.3 1.1 0.11 12.2 0.1 2.1 2 0 0 2 2 2 0 Kelch motif ASH PF15780.5 ORF79443 - 0.072 13.3 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Mito_carr PF00153.27 ORF78720 - 2.1e-08 34.0 0.0 2.7e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein TSCPD PF12637.7 ORF78412 - 0.12 12.6 0.1 0.17 12.1 0.1 1.3 1 0 0 1 1 1 0 TSCPD domain POT1 PF02765.17 ORF78189 - 0.043 13.6 0.0 0.054 13.3 0.0 1.2 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 DUF4315 PF14193.6 ORF76924 - 0.0044 17.0 0.8 0.0081 16.1 0.5 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4315) Sec8_exocyst PF04048.14 ORF76924 - 0.0064 16.4 1.1 0.012 15.6 1.1 1.4 1 1 0 1 1 1 1 Sec8 exocyst complex component specific domain Mucin-like PF16058.5 ORF76924 - 0.018 15.1 0.7 0.027 14.6 0.7 1.2 1 0 0 1 1 1 0 Mucin-like NYD-SP28_assoc PF14775.6 ORF76924 - 0.022 14.8 1.1 0.043 13.9 1.1 1.4 1 0 0 1 1 1 0 Sperm tail C-terminal domain Angiomotin_C PF12240.8 ORF76924 - 0.024 14.2 2.4 0.14 11.7 0.2 2.0 2 0 0 2 2 2 0 Angiomotin C terminal Snurportin1 PF11538.8 ORF76924 - 0.025 14.7 0.1 0.073 13.3 0.1 1.7 1 0 0 1 1 1 0 Snurportin1 bZIP_1 PF00170.21 ORF76924 - 0.065 13.3 0.7 0.14 12.3 0.7 1.6 1 0 0 1 1 1 0 bZIP transcription factor TSC22 PF01166.18 ORF76924 - 0.08 13.3 1.0 0.16 12.3 1.0 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family bZIP_2 PF07716.15 ORF76924 - 0.67 10.1 5.6 0.13 12.4 2.2 1.6 2 0 0 2 2 2 0 Basic region leucine zipper UPF0300 PF08594.10 ORF76014 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) amfpi-1 PF12190.8 ORF75814 - 0.017 15.7 2.0 0.017 15.7 2.0 1.5 1 1 1 2 2 2 0 Fungal protease inhibitor Fzo_mitofusin PF04799.13 ORF74418 - 0.0031 17.1 1.3 0.0041 16.7 1.3 1.2 1 0 0 1 1 1 1 fzo-like conserved region FTZ PF03867.14 ORF74418 - 0.05 13.1 1.2 0.057 12.9 1.2 1.1 1 0 0 1 1 1 0 Fushi tarazu (FTZ), N-terminal region PH PF00169.29 ORF73900 - 2.9e-12 47.0 0.6 3.2e-12 46.9 0.6 1.0 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF73900 - 0.00027 21.2 0.1 0.0012 19.1 0.1 1.9 1 1 0 1 1 1 1 Pleckstrin homology domain Mcp5_PH PF12814.7 ORF73900 - 0.00029 20.9 0.0 0.00035 20.7 0.0 1.1 1 0 0 1 1 1 1 Meiotic cell cortex C-terminal pleckstrin homology PH_12 PF16457.5 ORF73900 - 0.012 16.2 0.3 0.021 15.4 0.3 1.4 1 1 0 1 1 1 0 Pleckstrin homology domain PH_2 PF08458.10 ORF73900 - 0.026 14.9 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 Plant pleckstrin homology-like region PH_11 PF15413.6 ORF73900 - 0.059 13.8 1.9 0.097 13.1 1.9 1.4 1 1 0 1 1 1 0 Pleckstrin homology domain PSI PF01437.25 ORF72748 - 6 7.5 12.5 1.1 9.8 9.1 1.6 2 0 0 2 2 2 0 Plexin repeat DUF3341 PF11821.8 ORF72096 - 0.054 13.1 0.1 0.07 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) Yeast-kill-tox PF09207.11 ORF72096 - 0.092 13.4 0.5 0.14 12.8 0.5 1.4 1 0 0 1 1 1 0 Yeast killer toxin Glyco_transf_34 PF05637.12 ORF71716 - 0.027 14.2 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family Luteo_coat PF00894.18 ORF70912 - 0.0032 17.4 0.3 0.0044 16.9 0.3 1.2 1 0 0 1 1 1 1 Luteovirus coat protein La PF05383.17 ORF69453 - 1.4e-13 50.7 0.0 2e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 La domain RNase_P_Rpp14 PF01900.19 ORF69453 - 0.11 12.7 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Rpp14/Pop5 family Penicil_amidase PF01804.18 ORF6941 - 5.7e-05 22.3 0.0 6.6e-05 22.1 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase Peptidase_M57 PF12388.8 ORF68960 - 0.29 10.7 0.6 0.36 10.4 0.6 1.3 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase RAI1 PF08652.11 ORF68798 - 0.039 14.1 0.6 0.11 12.8 0.1 1.8 2 0 0 2 2 2 0 RAI1 like PD-(D/E)XK nuclease SAYSvFN PF10260.9 ORF68281 - 0.0079 16.1 0.1 2.1 8.3 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved domain (SAYSvFN) Transgly_assoc PF04226.13 ORF67917 - 1.9e-13 50.4 14.1 1.9e-13 50.4 14.1 2.1 2 0 0 2 2 2 1 Transglycosylase associated protein DUF5518 PF17647.1 ORF67917 - 0.01 16.0 16.5 0.014 15.6 16.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5518) MtrF PF09472.10 ORF67917 - 0.063 12.7 0.1 0.063 12.7 0.1 2.2 2 1 1 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) DUF983 PF06170.12 ORF67917 - 0.065 13.6 0.4 0.12 12.8 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF983) SHIPPO-rpt PF07004.12 ORF67139 - 1.8e-05 25.4 8.8 0.014 16.3 0.4 2.7 2 1 0 2 2 2 2 Sperm-tail PG-rich repeat Ribosomal_L29 PF00831.23 ORF66948 - 4.9e-16 58.5 4.6 4.9e-16 58.5 4.6 2.2 2 0 0 2 2 2 1 Ribosomal L29 protein Snapin_Pallidin PF14712.6 ORF66948 - 0.017 15.5 3.9 0.017 15.5 3.9 1.9 2 0 0 2 2 2 0 Snapin/Pallidin RF-1 PF00472.20 ORF65843 - 1.2e-15 57.4 0.0 1.8e-15 56.9 0.0 1.2 1 0 0 1 1 1 1 RF-1 domain DUF503 PF04456.12 ORF65843 - 0.094 12.6 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF503) Alba PF01918.21 ORF65623 - 1.7e-06 27.8 0.0 3e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Alba DUF2053 PF09767.9 ORF65188 - 0.0042 17.3 0.3 0.0055 16.9 0.3 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2053) Nucleoporin2 PF04096.14 ORF65111 - 0.0014 18.8 0.0 0.0019 18.3 0.0 1.1 1 0 0 1 1 1 1 Nucleoporin autopeptidase PDH PF02153.17 ORF65002 - 0.16 10.9 0.0 0.22 10.5 0.0 1.1 1 0 0 1 1 1 0 Prephenate dehydrogenase Zf_RING PF16744.5 ORF64871 - 0.34 11.0 0.2 0.34 11.0 0.2 3.3 2 1 2 4 4 4 0 KIAA1045 RING finger Carb_anhydrase PF00194.21 ORF64106 - 0.028 14.0 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic-type carbonic anhydrase RhaT PF06379.12 ORF64106 - 0.13 11.4 0.1 0.16 11.1 0.1 1.1 1 0 0 1 1 1 0 L-rhamnose-proton symport protein (RhaT) UPF0300 PF08594.10 ORF62151 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) UPF0300 PF08594.10 ORF60796 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) DUF4599 PF15371.6 ORF60666 - 0.036 14.6 1.0 0.036 14.6 1.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4599) Gsf2 PF11055.8 ORF59904 - 0.11 11.3 0.3 0.11 11.3 0.3 1.1 1 0 0 1 1 1 0 Glucose signalling factor 2 FtsX PF02687.21 ORF59048 - 0.22 12.0 7.8 0.36 11.3 7.8 1.4 1 0 0 1 1 1 0 FtsX-like permease family NTP_transf_4 PF13562.6 ORF58865 - 0.068 13.4 0.1 0.086 13.0 0.1 1.1 1 0 0 1 1 1 0 Sugar nucleotidyl transferase K-box PF01486.17 ORF58452 - 0.0052 16.9 10.3 0.028 14.6 4.3 2.3 2 0 0 2 2 2 1 K-box region Amidase PF01425.21 ORF58452 - 0.008 15.2 1.3 0.0096 14.9 1.3 1.0 1 0 0 1 1 1 1 Amidase Leu_zip PF15294.6 ORF58452 - 0.0094 15.5 13.0 0.011 15.3 13.0 1.0 1 0 0 1 1 1 1 Leucine zipper DUF935 PF06074.12 ORF58452 - 0.035 12.8 3.6 0.041 12.6 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF935) TSC22 PF01166.18 ORF58452 - 0.11 12.8 7.1 4 7.8 0.2 2.5 2 0 0 2 2 2 0 TSC-22/dip/bun family DUF1690 PF07956.11 ORF58452 - 0.22 11.9 10.3 0.28 11.6 10.3 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DivIC PF04977.15 ORF58452 - 0.5 10.2 13.2 1.3 8.9 3.7 2.3 1 1 1 2 2 2 0 Septum formation initiator Osmo_CC PF08946.10 ORF58452 - 0.5 10.6 11.6 0.78 10.0 0.3 3.2 2 1 1 3 3 3 0 Osmosensory transporter coiled coil Ax_dynein_light PF10211.9 ORF58452 - 0.8 9.6 14.1 1.9 8.4 13.7 1.7 1 1 1 2 2 2 0 Axonemal dynein light chain bZIP_1 PF00170.21 ORF58452 - 0.81 9.8 12.9 3.9 7.6 5.2 2.4 1 1 2 3 3 3 0 bZIP transcription factor Mgr1 PF08602.10 ORF58452 - 0.82 8.4 6.5 0.94 8.2 6.5 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit BST2 PF16716.5 ORF58452 - 0.88 10.2 13.4 3.1 8.4 5.0 2.1 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 ZapB PF06005.12 ORF58452 - 0.94 10.0 16.9 6.9 7.2 3.4 2.3 1 1 1 2 2 2 0 Cell division protein ZapB CENP-H PF05837.12 ORF58452 - 0.96 9.9 12.0 1.2 9.5 11.7 1.4 1 1 0 1 1 1 0 Centromere protein H (CENP-H) FapA PF03961.13 ORF58452 - 1 7.9 11.1 1.1 7.7 11.1 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF2681 PF10883.8 ORF58452 - 1 9.8 8.0 1.6 9.2 8.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) DASH_Dad3 PF08656.10 ORF58452 - 1.9 8.6 8.1 0.83 9.8 1.6 2.5 1 1 1 2 2 2 0 DASH complex subunit Dad3 bZIP_2 PF07716.15 ORF58452 - 2.8 8.1 11.5 2.6 8.2 1.5 2.5 2 0 0 2 2 2 0 Basic region leucine zipper Mto2_bdg PF12808.7 ORF58452 - 4.1 7.8 10.6 0.17 12.2 1.6 2.7 1 1 2 3 3 3 0 Micro-tubular organiser Mto1 C-term Mto2-binding region FlxA PF14282.6 ORF58452 - 7.3 6.6 19.3 0.54 10.3 5.9 2.4 1 1 1 2 2 2 0 FlxA-like protein YabA PF06156.13 ORF58452 - 9.7 6.9 12.8 39 5.0 11.1 2.0 1 1 1 2 2 2 0 Initiation control protein YabA NYD-SP28_assoc PF14775.6 ORF58452 - 9.8 6.4 11.5 4.7 7.4 2.1 3.0 2 1 1 3 3 3 0 Sperm tail C-terminal domain Robl_LC7 PF03259.17 ORF57962 - 1.9e-12 46.8 0.0 2.3e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF4822 PF16103.5 ORF57962 - 0.15 12.4 0.1 0.15 12.4 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4822) Corona_NSP4_C PF16348.5 ORF56644 - 0.046 14.5 2.3 0.63 10.9 1.6 2.1 1 1 1 2 2 2 0 Coronavirus nonstructural protein 4 C-terminus zf-ribbon_3 PF13248.6 ORF5548 - 0.063 12.7 0.7 0.063 12.7 0.7 2.2 2 0 0 2 2 2 0 zinc-ribbon domain UPF0300 PF08594.10 ORF54513 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) Thioredoxin PF00085.20 ORF53567 - 1e-10 41.5 0.0 1.5e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 ORF53567 - 0.0017 17.8 0.3 0.0022 17.4 0.2 1.3 1 1 0 1 1 1 1 OST3 / OST6 family, transporter family FTR_C PF02741.15 ORF53567 - 0.0074 16.3 0.1 0.0096 16.0 0.1 1.1 1 0 0 1 1 1 1 FTR, proximal lobe Thioredoxin_2 PF13098.6 ORF53567 - 0.054 14.0 0.1 0.078 13.4 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF53567 - 0.064 13.6 0.1 0.11 12.9 0.1 1.3 1 0 0 1 1 1 0 Thioredoxin-like EspB PF05802.11 ORF51634 - 0.054 13.5 0.0 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 Enterobacterial EspB protein Alba PF01918.21 ORF49890 - 1.7e-06 27.8 0.0 3e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Alba ATP-synt_8 PF00895.20 ORF49265 - 0.7 10.4 7.1 3.1 8.3 0.7 2.6 2 1 0 2 2 2 0 ATP synthase protein 8 ENOD40 PF08247.11 ORF49042 - 0.13 12.3 3.7 0.14 12.2 0.3 2.4 2 0 0 2 2 2 0 ENOD40 protein Alba PF01918.21 ORF48688 - 1.7e-06 27.8 0.0 3e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 Alba GUN4_N PF16416.5 ORF48621 - 0.0097 15.9 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 1 ARM-like repeat domain, GUN4-N terminal Kinesin PF00225.23 ORF48621 - 0.025 13.5 0.1 0.028 13.4 0.1 1.1 1 0 0 1 1 1 0 Kinesin motor domain PCMT PF01135.19 ORF48556 - 0.12 12.1 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CCD PF07860.11 ORF47925 - 0.054 13.5 0.1 0.079 13.0 0.1 1.3 1 0 0 1 1 1 0 WisP family C-Terminal Region CPBP PF02517.16 ORF47650 - 0.076 13.4 1.1 0.11 12.9 1.1 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease Tubulin PF00091.25 ORF47632 - 0.044 14.0 0.1 0.066 13.4 0.1 1.3 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain Pro_3_hydrox_C PF05373.11 ORF47632 - 0.069 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 L-proline 3-hydroxylase, C-terminal Spem1 PF15670.5 ORF45882 - 1.6 8.2 6.6 2 7.9 6.6 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 CPBP PF02517.16 ORF45280 - 0.076 13.4 1.1 0.11 12.9 1.1 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease YolD PF08863.10 ORF44475 - 0.12 12.4 0.3 0.26 11.4 0.3 1.6 1 1 0 1 1 1 0 YolD-like protein AIRC PF00731.20 ORF44282 - 0.096 12.3 0.3 0.18 11.4 0.1 1.5 1 1 1 2 2 2 0 AIR carboxylase EspB PF05802.11 ORF44003 - 0.054 13.5 0.0 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 Enterobacterial EspB protein Caleosin PF05042.13 ORF43617 - 0.013 15.5 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 Caleosin related protein GTP_cyclohydro2 PF00925.20 ORF43617 - 0.07 12.7 0.1 0.087 12.4 0.1 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase II Tmemb_9 PF05434.11 ORF43617 - 1.1 9.1 9.7 0.077 12.9 5.2 1.4 1 1 0 1 1 1 0 TMEM9 GATase_5 PF13507.6 ORF4249 - 0.093 11.8 0.1 0.13 11.3 0.1 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain LysR_substrate PF03466.20 ORF39807 - 1.2e-09 37.8 0.0 1.8e-09 37.3 0.0 1.3 1 1 0 1 1 1 1 LysR substrate binding domain Arg_decarbox_C PF17944.1 ORF39807 - 0.0083 16.7 0.8 0.015 15.8 0.8 1.3 1 0 0 1 1 1 1 Arginine decarboxylase C-terminal helical extension MFS_1 PF07690.16 ORF39640 - 6.4e-11 41.8 1.5 6.4e-11 41.8 1.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF39640 - 0.00079 18.4 3.4 0.0009 18.2 3.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter 7TM-7TMR_HD PF07698.11 ORF39640 - 0.015 15.0 5.0 0.018 14.8 5.0 1.2 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase MFS_3 PF05977.13 ORF39640 - 0.04 12.3 0.6 0.045 12.2 0.6 1.1 1 0 0 1 1 1 0 Transmembrane secretion effector TrbE PF11100.8 ORF39640 - 0.11 12.8 0.2 0.11 12.8 0.2 2.1 2 1 0 2 2 2 0 Conjugal transfer protein TrbE PH PF00169.29 ORF39207 - 2.9e-12 47.0 0.6 3.2e-12 46.9 0.6 1.0 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF39207 - 0.00027 21.2 0.1 0.0012 19.1 0.1 1.9 1 1 0 1 1 1 1 Pleckstrin homology domain Mcp5_PH PF12814.7 ORF39207 - 0.00029 20.9 0.0 0.00035 20.7 0.0 1.1 1 0 0 1 1 1 1 Meiotic cell cortex C-terminal pleckstrin homology PH_12 PF16457.5 ORF39207 - 0.012 16.2 0.3 0.021 15.4 0.3 1.4 1 1 0 1 1 1 0 Pleckstrin homology domain PH_2 PF08458.10 ORF39207 - 0.026 14.9 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 Plant pleckstrin homology-like region PH_11 PF15413.6 ORF39207 - 0.059 13.8 1.9 0.097 13.1 1.9 1.4 1 1 0 1 1 1 0 Pleckstrin homology domain DUF3313 PF11769.8 ORF38213 - 1.7e-31 109.5 0.2 1.8e-31 109.4 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3313) MobA_MobL PF03389.15 ORF35619 - 0.13 12.0 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 MobA/MobL family SYCP2_ARLD PF18581.1 ORF34873 - 0.0063 16.5 0.4 0.0085 16.1 0.4 1.2 1 0 0 1 1 1 1 Synaptonemal complex 2 armadillo-repeat-like domain FtsX PF02687.21 ORF33185 - 0.22 12.0 7.8 0.36 11.3 7.8 1.4 1 0 0 1 1 1 0 FtsX-like permease family Gemini_mov PF01708.16 ORF32903 - 0.16 11.7 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 Geminivirus putative movement protein Tmemb_9 PF05434.11 ORF32903 - 0.19 11.6 2.5 0.24 11.3 2.5 1.2 1 0 0 1 1 1 0 TMEM9 Abhydrolase_3 PF07859.13 ORF32619 - 1.8e-26 93.3 0.0 2.1e-26 93.1 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF32619 - 0.00055 18.9 0.1 0.0007 18.6 0.1 1.2 1 0 0 1 1 1 1 Steryl acetyl hydrolase COesterase PF00135.28 ORF32619 - 0.083 11.7 0.0 0.14 11.0 0.0 1.3 2 0 0 2 2 2 0 Carboxylesterase family PH PF00169.29 ORF3070 - 2.9e-12 47.0 0.6 3.2e-12 46.9 0.6 1.0 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF3070 - 0.00027 21.2 0.1 0.0012 19.1 0.1 1.9 1 1 0 1 1 1 1 Pleckstrin homology domain Mcp5_PH PF12814.7 ORF3070 - 0.00029 20.9 0.0 0.00035 20.7 0.0 1.1 1 0 0 1 1 1 1 Meiotic cell cortex C-terminal pleckstrin homology PH_12 PF16457.5 ORF3070 - 0.012 16.2 0.3 0.021 15.4 0.3 1.4 1 1 0 1 1 1 0 Pleckstrin homology domain PH_2 PF08458.10 ORF3070 - 0.026 14.9 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 Plant pleckstrin homology-like region PH_11 PF15413.6 ORF3070 - 0.059 13.8 1.9 0.097 13.1 1.9 1.4 1 1 0 1 1 1 0 Pleckstrin homology domain Peptidase_M57 PF12388.8 ORF29898 - 0.16 11.6 0.7 0.18 11.4 0.7 1.1 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase DUF4733 PF15878.5 ORF28532 - 2.3 8.7 3.9 4.2 7.9 3.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4733) HalX PF08663.10 ORF26764 - 0.0046 17.2 1.1 0.0083 16.4 1.1 1.5 1 0 0 1 1 1 1 HalX domain ENOD40 PF08247.11 ORF25789 - 0.13 12.3 3.7 0.14 12.2 0.3 2.4 2 0 0 2 2 2 0 ENOD40 protein ARL2_Bind_BART PF11527.8 ORF24219 - 6.5e-05 23.0 0.1 8.3e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART UPF0300 PF08594.10 ORF22762 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) CheR PF01739.18 ORF22649 - 0.09 12.2 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 CheR methyltransferase, SAM binding domain TspO_MBR PF03073.15 ORF22540 - 0.0029 17.7 1.1 0.0034 17.5 1.1 1.1 1 0 0 1 1 1 1 TspO/MBR family DUF983 PF06170.12 ORF22540 - 0.036 14.5 0.9 0.052 14.0 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF983) DUF3149 PF11346.8 ORF22540 - 0.15 11.7 6.7 1.2 8.8 6.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) CDC24_OB2 PF17245.2 ORF21616 - 0.054 14.1 0.0 0.064 13.8 0.0 1.2 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 2 Sperm_Ag_HE2 PF05324.13 ORF21402 - 0.21 12.1 2.0 0.74 10.3 0.4 2.1 2 0 0 2 2 2 0 Sperm antigen HE2 Condensin2nSMC PF12422.8 ORF20761 - 0.12 12.5 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Condensin II non structural maintenance of chromosomes subunit DAGK_prokar PF01219.19 ORF17506 - 1.8e-35 120.8 7.7 2.1e-35 120.6 7.7 1.0 1 0 0 1 1 1 1 Prokaryotic diacylglycerol kinase YbgT_YccB PF08173.11 ORF17506 - 0.74 10.0 8.1 0.63 10.2 0.5 2.8 2 0 0 2 2 2 0 Membrane bound YbgT-like protein DUF2976 PF11190.8 ORF17506 - 6.2 6.7 10.7 1.6 8.6 3.7 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2976) Ig_6 PF18452.1 ORF15653 - 0.051 13.1 0.1 0.099 12.2 0.1 1.4 1 0 0 1 1 1 0 Immunoglobulin domain BORCS7 PF16088.5 ORF152719 - 0.0086 16.3 0.6 0.017 15.4 0.6 1.4 1 0 0 1 1 1 1 BLOC-1-related complex sub-unit 7 Glucosaminidase PF01832.20 ORF151322 - 5.9e-15 55.5 0.8 7.3e-15 55.2 0.8 1.1 1 0 0 1 1 1 1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase V-ATPase_G PF03179.15 ORF150515 - 0.083 13.4 13.7 0.11 13.1 13.7 1.3 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit FAM199X PF15814.5 ORF150515 - 0.16 11.0 10.8 0.16 11.0 10.8 1.1 1 0 0 1 1 1 0 Protein family FAM199X TAF4 PF05236.14 ORF150515 - 0.46 10.2 16.7 0.5 10.1 16.7 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family DAG_kinase_N PF14513.6 ORF150515 - 0.61 10.3 10.7 0.76 10.0 10.7 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus PGA2 PF07543.12 ORF150515 - 0.92 9.5 13.6 1.2 9.1 13.6 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 Peroxin-3 PF04882.12 ORF150515 - 0.99 8.3 16.4 1.2 8.1 16.4 1.0 1 0 0 1 1 1 0 Peroxin-3 V_ATPase_I PF01496.19 ORF150515 - 1.1 7.1 8.2 1.2 6.9 8.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Miga PF10265.9 ORF150515 - 1.1 8.1 12.0 1.2 8.0 12.0 1.0 1 0 0 1 1 1 0 Mitoguardin DUF2151 PF10221.9 ORF150515 - 1.3 7.5 15.4 1.5 7.3 15.4 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator DUF913 PF06025.12 ORF150515 - 1.4 7.8 12.1 1.6 7.6 12.1 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) FSA_C PF10479.9 ORF150515 - 1.5 6.9 8.1 1.7 6.7 8.1 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Menin PF05053.13 ORF150515 - 1.7 6.9 11.4 1.9 6.7 11.4 1.1 1 0 0 1 1 1 0 Menin MAJIN PF15077.6 ORF150515 - 1.7 8.3 11.5 2.1 8.1 11.5 1.1 1 0 0 1 1 1 0 Membrane-anchored junction protein GTA_holin_3TM PF11351.8 ORF150515 - 1.8 9.1 6.8 2 9.0 6.3 1.4 1 1 0 1 1 1 0 Holin of 3TMs, for gene-transfer release DUF4407 PF14362.6 ORF150515 - 2.4 7.5 10.1 2.4 7.4 10.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3807 PF12720.7 ORF150515 - 3.1 8.0 16.5 3.7 7.8 16.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) NARP1 PF12569.8 ORF150515 - 4 6.2 14.6 4.4 6.1 14.6 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Macoilin PF09726.9 ORF150515 - 4.5 5.7 19.0 5.3 5.5 19.0 1.1 1 0 0 1 1 1 0 Macoilin family DUF2052 PF09747.9 ORF150515 - 5.6 7.0 16.3 6.6 6.8 16.3 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Kei1 PF08552.11 ORF150515 - 6.1 6.7 10.1 7.2 6.5 10.1 1.3 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 MCLC PF05934.11 ORF150515 - 6.3 5.4 9.8 6.9 5.3 9.8 1.1 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Presenilin PF01080.17 ORF150515 - 6.9 5.3 16.9 7.6 5.2 16.9 1.0 1 0 0 1 1 1 0 Presenilin SLC12 PF03522.15 ORF150515 - 7.3 5.5 14.5 8.6 5.3 14.5 1.0 1 0 0 1 1 1 0 Solute carrier family 12 Vfa1 PF08432.10 ORF150515 - 9.7 6.5 17.4 11 6.2 17.4 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DDHD PF02862.17 ORF150515 - 9.7 6.3 12.8 15 5.7 12.8 1.3 1 0 0 1 1 1 0 DDHD domain DUF4912 PF16258.5 ORF150344 - 0.043 14.0 0.7 0.26 11.5 0.1 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4912) LepA_C PF06421.12 ORF150344 - 3.3 7.9 7.0 3.7 7.7 0.1 2.1 1 1 1 2 2 2 0 GTP-binding protein LepA C-terminus DUSP PF06337.12 ORF14896 - 8.4e-08 32.7 1.6 1.2e-07 32.3 1.6 1.3 1 0 0 1 1 1 1 DUSP domain DUF4202 PF13875.6 ORF147853 - 0.054 13.4 0.2 5.3 6.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4202) FolB PF02152.18 ORF145187 - 6.6e-32 110.4 0.4 7.3e-32 110.2 0.4 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase DUF2866 PF11065.8 ORF145187 - 0.038 14.0 0.0 0.065 13.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2866) Gsf2 PF11055.8 ORF144518 - 0.11 11.3 0.3 0.11 11.3 0.3 1.1 1 0 0 1 1 1 0 Glucose signalling factor 2 UPF0300 PF08594.10 ORF144205 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) HSA PF07529.13 ORF143516 - 0.015 15.6 0.7 0.021 15.1 0.7 1.2 1 0 0 1 1 1 0 HSA CPBP PF02517.16 ORF143106 - 0.076 13.4 1.1 0.11 12.9 1.1 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease CARD_2 PF16739.5 ORF142263 - 0.078 13.0 0.0 1.6 8.8 0.0 2.0 1 1 1 2 2 2 0 Caspase recruitment domain CBP4 PF07960.11 ORF142263 - 0.11 12.3 0.9 0.2 11.5 0.7 1.4 1 1 0 1 1 1 0 CBP4 DUF4360 PF14273.6 ORF142263 - 0.13 12.1 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4360) TPR_2 PF07719.17 ORF142029 - 0.0008 19.3 0.1 0.0041 17.1 0.1 2.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF142029 - 0.0049 16.6 0.3 0.013 15.3 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF142029 - 0.017 15.2 0.1 0.051 13.7 0.1 1.8 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat DnaJ PF00226.31 ORF142029 - 0.022 14.9 1.1 0.11 12.6 0.2 2.3 2 0 0 2 2 2 0 DnaJ domain DUF627 PF04781.12 ORF142029 - 0.067 13.2 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF627) Kinesin PF00225.23 ORF141242 - 4.2e-10 39.1 0.0 4.9e-10 38.8 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain DUF682 PF05081.12 ORF139586 - 0.023 14.4 0.1 0.028 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF682) GRDP-like PF07173.12 ORF139586 - 0.1 13.2 0.0 0.17 12.6 0.0 1.4 1 0 0 1 1 1 0 Glycine-rich domain-containing protein-like PknH_C PF14032.6 ORF137306 - 0.04 13.8 0.2 0.051 13.4 0.2 1.1 1 0 0 1 1 1 0 PknH-like extracellular domain Protamine_like PF06382.11 ORF135959 - 0.09 13.0 1.5 0.19 11.9 0.4 1.9 2 0 0 2 2 2 0 Protamine and protamine like Ribosomal_L29 PF00831.23 ORF134459 - 4.9e-16 58.5 4.6 4.9e-16 58.5 4.6 2.2 2 0 0 2 2 2 1 Ribosomal L29 protein Snapin_Pallidin PF14712.6 ORF134459 - 0.017 15.5 3.9 0.017 15.5 3.9 1.9 2 0 0 2 2 2 0 Snapin/Pallidin RNF220 PF15926.5 ORF13430 - 0.033 13.8 0.2 0.033 13.8 0.2 1.2 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase RNF220 Herpes_LP PF03363.13 ORF134229 - 0.066 13.0 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus leader protein YrhC PF14143.6 ORF132795 - 4.5 7.4 5.6 3.8 7.7 0.7 2.7 2 1 1 3 3 3 0 YrhC-like protein QueT PF06177.11 ORF131540 - 0.073 13.5 1.0 0.074 13.4 1.0 1.4 1 1 0 1 1 1 0 QueT transporter Robl_LC7 PF03259.17 ORF131495 - 1.9e-12 46.8 0.0 2.3e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF4822 PF16103.5 ORF131495 - 0.15 12.4 0.1 0.15 12.4 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4822) DUF2399 PF09664.10 ORF127576 - 0.015 15.2 0.2 0.022 14.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2399) Gluconate_2-dh3 PF13618.6 ORF126362 - 0.0097 16.1 0.2 0.011 16.0 0.2 1.3 1 0 0 1 1 1 1 Gluconate 2-dehydrogenase subunit 3 SAM_2 PF07647.17 ORF126362 - 0.044 13.9 0.1 0.067 13.3 0.1 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF2508 PF10704.9 ORF126362 - 0.059 13.6 1.6 0.11 12.7 1.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2508) S-antigen PF05756.11 ORF126362 - 1.7 9.1 7.1 3.2 8.2 6.9 1.7 1 1 0 1 1 1 0 S-antigen protein Flavi_M PF01004.19 ORF122845 - 0.035 13.8 0.0 0.057 13.2 0.0 1.4 1 0 0 1 1 1 0 Flavivirus envelope glycoprotein M TMEM52 PF14979.6 ORF122742 - 0.092 12.7 1.4 0.12 12.3 1.4 1.2 1 0 0 1 1 1 0 Transmembrane 52 Tetradecapep PF08187.11 ORF122110 - 6.8 7.0 6.0 2.5 8.3 2.6 2.0 2 0 0 2 2 2 0 Myoactive tetradecapeptides family Zn_ribbon_17 PF17120.5 ORF121310 - 9.2 6.0 18.8 0.46 10.1 5.6 2.5 2 1 0 2 2 2 0 Zinc-ribbon, C4HC2 type UPF0300 PF08594.10 ORF119542 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) Mo25 PF08569.11 ORF117558 - 0.047 13.0 2.6 0.049 13.0 2.6 1.0 1 0 0 1 1 1 0 Mo25-like DUF1471 PF07338.13 ORF116571 - 4.4e-18 65.0 0.0 7.5e-18 64.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks216.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks216.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks216.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks216.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-C3HC4_4 PF15227.6 ORF113280 - 5.3e-08 32.9 6.9 5.3e-08 32.9 6.9 1.5 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF113280 - 3.1e-05 23.9 4.5 3.1e-05 23.9 4.5 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF113280 - 3.7e-05 23.5 6.7 0.0001 22.1 6.6 1.8 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF113280 - 3.9e-05 23.4 8.4 4.8e-05 23.1 3.6 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF113280 - 0.0015 18.3 2.8 0.0015 18.3 2.8 2.2 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 ORF113280 - 0.0019 18.3 7.8 0.0032 17.6 7.8 1.4 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-RING_5 PF14634.6 ORF113280 - 0.002 18.0 10.9 0.011 15.6 9.6 2.2 1 1 1 2 2 2 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF113280 - 0.01 15.6 7.4 0.051 13.4 7.5 2.0 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_14 PF17978.1 ORF113280 - 0.024 15.1 5.0 0.058 13.8 5.0 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain ArfGap PF01412.18 ORF113280 - 0.072 13.2 6.7 2.7 8.1 6.7 2.1 1 1 0 1 1 1 0 Putative GTPase activating protein for Arf zf-RING_2 PF13639.6 ORF113280 - 0.094 13.1 10.1 0.37 11.2 9.5 2.1 1 1 1 2 2 2 0 Ring finger domain NOB1_Zn_bind PF08772.11 ORF113280 - 1.4 9.1 7.2 0.58 10.4 2.9 2.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like DUF4116 PF13475.6 ORF112613 - 5.5e-29 99.6 0.0 1e-11 44.4 0.0 3.0 2 1 1 3 3 3 3 Domain of unknown function (DUF4116) CdhD PF03599.16 ORF112613 - 0.13 10.9 0.2 0.15 10.8 0.2 1.0 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit MFS_1 PF07690.16 ORF11237 - 0.0019 17.2 9.5 0.0021 17.1 9.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MORN PF02493.20 ORF112208 - 2.3e-07 30.3 8.9 0.0013 18.5 0.3 2.9 3 1 0 3 3 3 2 MORN repeat PIG-F PF06699.11 ORF110609 - 0.061 13.5 0.4 0.069 13.3 0.4 1.2 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F CCDC14 PF15254.6 ORF110609 - 0.55 8.8 4.0 0.61 8.7 4.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 MCLC PF05934.11 ORF110146 - 0.1 11.3 0.3 0.1 11.3 0.3 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) DUF3525 PF12039.8 ORF110069 - 0.31 9.7 1.5 0.38 9.4 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3525) Hydrophobin_2 PF06766.11 ORF108754 - 0.056 13.4 1.6 0.094 12.7 1.6 1.4 1 0 0 1 1 1 0 Fungal hydrophobin UPF0300 PF08594.10 ORF108469 - 0.044 13.1 0.8 0.14 11.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0300) Zf_RING PF16744.5 ORF102184 - 0.34 11.0 0.2 0.34 11.0 0.2 3.3 2 1 2 4 4 4 0 KIAA1045 RING finger TadE PF07811.12 ORF102015 - 0.075 13.3 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 TadE-like protein Gsf2 PF11055.8 ORF100590 - 0.11 11.3 0.3 0.11 11.3 0.3 1.1 1 0 0 1 1 1 0 Glucose signalling factor 2 Ectatomin PF06457.11 ORF10024 - 0.053 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Ectatomin EcoR124_C PF12008.8 ORF100227 - 0.067 12.8 6.4 0.071 12.7 6.4 1.1 1 0 0 1 1 1 0 Type I restriction and modification enzyme - subunit R C terminal TSCPD PF12637.7 ORF100133 - 0.12 12.6 0.1 0.17 12.1 0.1 1.3 1 0 0 1 1 1 0 TSCPD domain PHO4 PF01384.20 NODE_50754_length_361_cov_1.472393_g42849_i0forward_frame_1 - 1.6e-20 73.4 10.2 1.6e-19 70.2 10.2 1.9 1 1 0 1 1 1 1 Phosphate transporter family HemY_N PF07219.13 NODE_50754_length_361_cov_1.472393_g42849_i0forward_frame_1 - 0.0014 18.8 0.3 0.035 14.3 0.0 2.1 2 0 0 2 2 2 1 HemY protein N-terminus DUF1240 PF06836.12 NODE_50754_length_361_cov_1.472393_g42849_i0forward_frame_1 - 0.091 13.3 3.9 0.062 13.8 2.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1240) DUF4514 PF14986.6 NODE_50754_length_361_cov_1.472393_g42849_i0forward_frame_1 - 0.58 10.2 2.1 3.9 7.5 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4514) Rpr2 PF04032.16 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_1 - 0.31 11.4 11.5 0.43 10.9 5.7 2.1 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain TetR_C_37 PF18665.1 NODE_50740_length_361_cov_2.337423_g42835_i0reverse_frame_1 - 0.087 13.4 0.1 0.11 13.1 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain AAA_16 PF13191.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.0026 18.2 0.0 0.0035 17.7 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.0049 17.4 0.0 0.0049 17.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.006 16.8 0.1 0.0062 16.8 0.1 1.3 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.0062 17.0 0.0 0.0077 16.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_33 PF13671.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.015 15.5 0.1 0.016 15.3 0.1 1.3 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.022 15.1 0.2 0.022 15.1 0.2 1.3 1 1 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.042 13.2 0.1 0.048 13.0 0.1 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family ATP_bind_1 PF03029.17 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.047 13.5 0.1 0.065 13.0 0.1 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.054 13.9 0.0 0.075 13.4 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Thymidylate_kin PF02223.17 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.058 13.1 0.1 0.065 12.9 0.1 1.5 1 1 0 1 1 1 0 Thymidylate kinase Dynamin_N PF00350.23 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.065 13.3 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Dynamin family AAA_17 PF13207.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.072 13.5 0.2 0.093 13.1 0.2 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.075 12.8 0.1 0.076 12.7 0.1 1.1 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.082 12.7 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.098 11.9 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin GTP_EFTU PF00009.27 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.1 12.2 0.1 0.12 11.9 0.1 1.2 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_28 PF13521.6 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.11 12.8 0.2 0.11 12.7 0.2 1.5 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.11 11.4 0.0 0.15 10.9 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain PRK PF00485.18 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.18 11.5 0.1 0.2 11.4 0.1 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family KTI12 PF08433.10 NODE_50740_length_361_cov_2.337423_g42835_i0forward_frame_1 - 0.23 10.9 0.1 0.26 10.7 0.1 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 MSG PF02349.15 NODE_50739_length_361_cov_2.407975_g42834_i0reverse_frame_1 - 0.0036 17.5 1.8 0.0062 16.7 1.8 1.4 1 0 0 1 1 1 1 Major surface glycoprotein Hep_core_N PF08290.11 NODE_50731_length_361_cov_3.116564_g42826_i0reverse_frame_1 - 0.094 12.7 0.8 0.094 12.7 0.8 4.1 3 2 1 4 4 4 0 Hepatitis core protein, putative zinc finger Nse4_C PF08743.10 NODE_50724_length_361_cov_24.739264_g42819_i0reverse_frame_1 - 0.06 13.6 0.3 0.091 13.0 0.3 1.4 1 1 0 1 1 1 0 Nse4 C-terminal Fer4_21 PF14697.6 NODE_50724_length_361_cov_24.739264_g42819_i0forward_frame_1 - 0.0055 16.8 1.0 0.0055 16.8 1.0 1.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain YMF19 PF02326.15 NODE_50720_length_361_cov_50.052147_g42815_i0forward_frame_1 - 0.04 14.7 1.9 0.04 14.7 1.9 1.7 2 0 0 2 2 2 0 Plant ATP synthase F0 DUF2070 PF09843.9 NODE_50717_length_361_cov_60.438650_g42812_i0forward_frame_1 - 1.8 6.7 5.1 2.2 6.5 5.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) SOCS_box PF07525.16 NODE_50707_length_361_cov_78.147239_g42802_i0forward_frame_1 - 0.065 13.6 0.2 0.065 13.6 0.2 1.9 2 0 0 2 2 2 0 SOCS box YqfD PF06898.11 NODE_50706_length_361_cov_78.226994_g42801_i0reverse_frame_1 - 0.54 9.0 3.0 0.71 8.7 2.9 1.2 1 1 0 1 1 1 0 Putative stage IV sporulation protein YqfD T2SSC PF11356.8 NODE_50705_length_361_cov_80.223926_g42800_i0reverse_frame_1 - 0.03 14.2 0.2 0.047 13.6 0.1 1.4 1 1 0 1 1 1 0 Type II secretion system protein C Atrophin-1 PF03154.15 NODE_50698_length_361_cov_111.822086_g42793_i0reverse_frame_1 - 2.1 6.5 7.9 2.5 6.3 7.9 1.0 1 0 0 1 1 1 0 Atrophin-1 family fn2 PF00040.19 NODE_50689_length_361_cov_186.015337_g42784_i0forward_frame_1 - 0.064 13.5 2.6 0.15 12.4 2.6 1.5 1 0 0 1 1 1 0 Fibronectin type II domain DUF3039 PF11238.8 NODE_50685_length_361_cov_225.052147_g42780_i0reverse_frame_1 - 0.056 13.2 0.5 4.7 7.1 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) BssS PF13991.6 NODE_50670_length_362_cov_1.636086_g42766_i0reverse_frame_1 - 0.017 15.2 0.0 1.5 9.0 0.0 2.2 2 0 0 2 2 2 0 BssS protein family DUF2227 PF09988.9 NODE_50670_length_362_cov_1.636086_g42766_i0forward_frame_1 - 0.0045 16.9 0.2 0.0061 16.5 0.2 1.3 1 0 0 1 1 1 1 Uncharacterized metal-binding protein (DUF2227) E2F_TDP PF02319.20 NODE_50669_length_362_cov_1.703364_g42765_i0reverse_frame_1 - 5.7e-19 68.0 0.6 1.1e-18 67.1 0.6 1.5 1 0 0 1 1 1 1 E2F/DP family winged-helix DNA-binding domain B-block_TFIIIC PF04182.12 NODE_50669_length_362_cov_1.703364_g42765_i0reverse_frame_1 - 0.0084 16.2 0.1 0.013 15.7 0.1 1.3 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC TrmB PF01978.19 NODE_50669_length_362_cov_1.703364_g42765_i0reverse_frame_1 - 0.032 14.1 0.0 0.047 13.6 0.0 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Defensin_RK-1 PF17860.1 NODE_50664_length_362_cov_1.951070_g42760_i0forward_frame_1 - 2.4 8.7 10.3 0.47 11.0 4.1 2.3 2 0 0 2 2 2 0 RK-1-like defensin zf-CCCH_7 PF18586.1 NODE_50663_length_362_cov_1.975535_g42759_i0reverse_frame_1 - 1.2 9.5 7.1 0.18 12.2 3.2 1.6 2 0 0 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 Jiraiya PF15038.6 NODE_50663_length_362_cov_1.975535_g42759_i0forward_frame_1 - 0.019 14.4 0.6 0.026 14.0 0.5 1.3 1 1 0 1 1 1 0 Jiraiya RBD-FIP PF09457.10 NODE_50654_length_362_cov_2.443425_g42750_i0reverse_frame_1 - 0.06 13.3 0.0 0.19 11.7 0.0 1.8 1 1 0 1 1 1 0 FIP domain HOK_GEF PF01848.16 NODE_50653_length_362_cov_2.495413_g42749_i0reverse_frame_1 - 1.3e-20 72.6 3.4 1.8e-20 72.0 3.4 1.3 1 0 0 1 1 1 1 Hok/gef family DUF753 PF05444.12 NODE_50653_length_362_cov_2.495413_g42749_i0forward_frame_1 - 0.41 10.6 8.6 1.5 8.8 8.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF753) Collagen PF01391.18 NODE_50642_length_362_cov_34.073394_g42738_i0reverse_frame_1 - 0.094 12.5 20.1 0.22 11.3 8.3 2.4 2 0 0 2 2 2 0 Collagen triple helix repeat (20 copies) Retinal PF15449.6 NODE_50642_length_362_cov_34.073394_g42738_i0forward_frame_1 - 1.9 6.1 7.8 2 6.1 7.8 1.0 1 0 0 1 1 1 0 Retinal protein zf-H2C2_2 PF13465.6 NODE_50635_length_362_cov_58.804281_g42731_i0reverse_frame_1 - 0.097 13.1 1.8 8.1 7.1 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain SKA2 PF16740.5 NODE_50632_length_362_cov_76.235474_g42728_i0forward_frame_1 - 0.023 14.5 1.5 0.033 14.0 1.5 1.2 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 LSM PF01423.22 NODE_50614_length_362_cov_290.932722_g42710_i0forward_frame_1 - 0.0097 15.6 0.1 0.014 15.1 0.1 1.2 1 0 0 1 1 1 1 LSM domain Adeno_E3_15_3 PF03307.14 NODE_50611_length_362_cov_339.321101_g42707_i0reverse_frame_1 - 0.064 13.2 0.7 0.095 12.7 0.7 1.3 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region PolyA_pol_arg_C PF12626.7 NODE_50609_length_362_cov_360.406728_g42705_i0reverse_frame_1 - 0.14 12.2 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Polymerase A arginine-rich C-terminus Peptidase_C13 PF01650.18 NODE_50604_length_362_cov_7796.171254_g42700_i0forward_frame_1 - 3e-38 131.8 1.1 3.2e-38 131.7 1.1 1.0 1 0 0 1 1 1 1 Peptidase C13 family Me-amine-dh_L PF02975.14 NODE_50603_length_362_cov_13960.061162_g42699_i0reverse_frame_1 - 0.41 11.2 3.9 1.6 9.2 0.1 2.2 1 1 1 2 2 2 0 Methylamine dehydrogenase, L chain Peptidase_A21 PF03566.13 NODE_50600_length_363_cov_1.670732_g42696_i0forward_frame_1 - 0.057 11.7 0.0 0.073 11.3 0.0 1.0 1 0 0 1 1 1 0 Peptidase family A21 YjcB PF15940.5 NODE_50598_length_363_cov_1.737805_g42694_i0reverse_frame_1 - 0.11 12.7 0.1 0.14 12.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function Nop53 PF07767.11 NODE_50591_length_363_cov_2.024390_g42687_i0reverse_frame_1 - 0.0086 15.5 1.0 0.011 15.2 1.0 1.1 1 0 0 1 1 1 1 Nop53 (60S ribosomal biogenesis) DNA_PPF PF02916.15 NODE_50591_length_363_cov_2.024390_g42687_i0reverse_frame_1 - 0.038 14.4 0.4 0.059 13.8 0.4 1.2 1 0 0 1 1 1 0 DNA polymerase processivity factor Pkinase PF00069.25 NODE_50588_length_363_cov_2.073171_g42684_i0reverse_frame_1 - 9.8e-26 90.7 0.0 1.1e-25 90.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50588_length_363_cov_2.073171_g42684_i0reverse_frame_1 - 2.9e-12 46.4 0.0 3.3e-12 46.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_50588_length_363_cov_2.073171_g42684_i0reverse_frame_1 - 0.00072 19.0 0.0 0.0012 18.2 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_50588_length_363_cov_2.073171_g42684_i0reverse_frame_1 - 0.0044 15.8 0.0 0.0046 15.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 NODE_50588_length_363_cov_2.073171_g42684_i0reverse_frame_1 - 0.084 12.2 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 NODE_50588_length_363_cov_2.073171_g42684_i0reverse_frame_1 - 0.12 12.2 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Glycos_transf_3 PF00591.21 NODE_50587_length_363_cov_2.073171_g42683_i0reverse_frame_1 - 1.6e-33 116.4 0.6 1.8e-33 116.2 0.6 1.0 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain zf-CCCH_2 PF14608.6 NODE_50587_length_363_cov_2.073171_g42683_i0forward_frame_1 - 0.056 13.9 0.2 0.12 12.9 0.2 1.6 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Megourin PF17560.2 NODE_50581_length_363_cov_2.371951_g42677_i0reverse_frame_1 - 0.18 12.0 2.2 0.31 11.3 2.2 1.3 1 0 0 1 1 1 0 Aphid Megourins Branch PF02485.21 NODE_50581_length_363_cov_2.371951_g42677_i0forward_frame_1 - 0.012 15.2 0.0 0.013 15.0 0.0 1.1 1 0 0 1 1 1 0 Core-2/I-Branching enzyme PDCD2_C PF04194.13 NODE_50581_length_363_cov_2.371951_g42677_i0forward_frame_1 - 0.053 13.6 0.1 0.063 13.4 0.1 1.3 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain SRCR_2 PF15494.6 NODE_50578_length_363_cov_2.500000_g42674_i0reverse_frame_1 - 3.3 8.3 16.1 0.099 13.2 4.2 2.4 1 1 1 2 2 2 0 Scavenger receptor cysteine-rich domain PHBC_N PF12551.8 NODE_50578_length_363_cov_2.500000_g42674_i0forward_frame_1 - 0.11 12.3 0.4 0.19 11.5 0.4 1.4 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase N terminal DUF1449 PF07290.11 NODE_50573_length_363_cov_2.750000_g42669_i0forward_frame_1 - 1.8e-30 106.1 0.0 2e-30 106.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1449) Tetraspanin PF00335.20 NODE_50573_length_363_cov_2.750000_g42669_i0forward_frame_1 - 0.017 14.9 0.1 0.017 14.9 0.1 1.1 1 0 0 1 1 1 0 Tetraspanin family Ac76 PF05814.11 NODE_50566_length_363_cov_37.673780_g42662_i0reverse_frame_1 - 0.006 16.6 0.2 0.0094 15.9 0.2 1.4 1 0 0 1 1 1 1 Orf76 (Ac76) HTH_6 PF01418.17 NODE_50565_length_363_cov_42.689024_g42661_i0forward_frame_1 - 0.63 10.1 2.0 0.81 9.7 0.6 1.9 2 1 1 3 3 3 0 Helix-turn-helix domain, rpiR family Bunya_G2 PF03563.13 NODE_50564_length_363_cov_44.082317_g42660_i0forward_frame_1 - 0.12 11.6 5.9 0.13 11.5 5.9 1.1 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 TMEM154 PF15102.6 NODE_50564_length_363_cov_44.082317_g42660_i0forward_frame_1 - 0.18 11.7 4.7 0.21 11.5 4.7 1.3 1 0 0 1 1 1 0 TMEM154 protein family LEAP-2 PF07359.11 NODE_50554_length_363_cov_70.015244_g42650_i0reverse_frame_1 - 0.077 12.8 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) DUF1117 PF06547.12 NODE_50553_length_363_cov_70.972561_g42649_i0forward_frame_1 - 0.033 14.7 1.0 0.045 14.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) Ribosomal_L13e PF01294.18 NODE_50553_length_363_cov_70.972561_g42649_i0forward_frame_1 - 0.066 13.1 1.3 0.085 12.7 1.3 1.1 1 0 0 1 1 1 0 Ribosomal protein L13e DUF4045 PF13254.6 NODE_50553_length_363_cov_70.972561_g42649_i0forward_frame_1 - 0.43 10.2 3.8 0.5 10.0 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) Acetyltransf_10 PF13673.7 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 8.1e-13 48.4 0.0 9.9e-13 48.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 2.7e-11 43.7 0.2 3.6e-11 43.3 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 2e-09 37.7 0.1 2.6e-09 37.3 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 1.5e-05 25.1 0.0 2.2e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.0018 18.2 0.0 0.0032 17.4 0.0 1.4 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.0022 18.1 0.0 0.0031 17.6 0.0 1.2 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.0046 17.1 0.0 0.0065 16.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltr_2 PF13718.6 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.048 13.1 0.0 0.06 12.7 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase 2 MOZ_SAS PF01853.18 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.16 11.6 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 MOZ/SAS family Acetyltransf_13 PF13880.6 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_1 - 0.2 11.7 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase KTI12 PF08433.10 NODE_50544_length_363_cov_79.682927_g42641_i0forward_frame_1 - 0.0093 15.4 0.4 0.025 14.1 0.2 1.6 1 1 0 2 2 2 1 Chromatin associated protein KTI12 MAP17 PF15807.5 NODE_50544_length_363_cov_79.682927_g42641_i0forward_frame_1 - 0.09 13.0 0.6 0.14 12.4 0.6 1.4 1 1 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 FNIP PF05725.12 NODE_50529_length_363_cov_144.868902_g42626_i0reverse_frame_1 - 1.4e-33 114.7 22.7 3.4e-12 46.3 1.0 3.0 1 1 3 4 4 4 4 FNIP Repeat LRR_5 PF13306.6 NODE_50529_length_363_cov_144.868902_g42626_i0reverse_frame_1 - 0.0003 20.7 0.0 0.00054 19.9 0.0 1.4 1 1 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) LRR_11 PF18831.1 NODE_50529_length_363_cov_144.868902_g42626_i0reverse_frame_1 - 1.6 8.4 12.5 23 4.6 0.2 4.5 4 0 0 4 4 4 0 Leucine-rich repeat MIase PF02426.16 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_1 - 0.071 13.3 1.3 1.8 8.8 0.3 2.9 1 1 3 4 4 4 0 Muconolactone delta-isomerase CIMR PF00878.18 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_1 - 0.11 12.6 0.3 0.17 12.0 0.3 1.3 1 0 0 1 1 1 0 Cation-independent mannose-6-phosphate receptor repeat WHIM1 PF15612.6 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_1 - 0.14 11.7 0.6 2.2 7.9 0.1 2.6 2 1 0 2 2 2 0 WSTF, HB1, Itc1p, MBD9 motif 1 Chlam_PMP PF02415.17 NODE_50504_length_364_cov_1.586626_g42604_i0reverse_frame_3 - 0.00093 19.5 5.3 0.0031 17.9 1.5 2.3 2 0 0 2 2 2 1 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Microcin PF03526.13 NODE_50504_length_364_cov_1.586626_g42604_i0reverse_frame_3 - 0.01 15.6 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein DUF5439 PF17507.2 NODE_50504_length_364_cov_1.586626_g42604_i0reverse_frame_3 - 0.056 13.7 1.7 0.095 12.9 1.7 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5439) OTU PF02338.19 NODE_50503_length_364_cov_1.689970_g42603_i0forward_frame_2 - 0.11 13.0 0.2 0.2 12.1 0.2 1.4 1 0 0 1 1 1 0 OTU-like cysteine protease zf-CCHC_4 PF14392.6 NODE_50501_length_364_cov_1.790274_g42601_i0reverse_frame_2 - 0.1 12.3 0.7 0.18 11.6 0.7 1.4 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_6 PF15288.6 NODE_50501_length_364_cov_1.790274_g42601_i0reverse_frame_2 - 0.14 12.0 2.5 0.23 11.4 2.5 1.3 1 0 0 1 1 1 0 Zinc knuckle oligo_HPY PF08352.12 NODE_50499_length_364_cov_1.893617_g42599_i0reverse_frame_3 - 0.11 13.1 0.0 0.15 12.6 0.0 1.2 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region Nanovirus_coat PF04660.12 NODE_50495_length_364_cov_1.993921_g42595_i0reverse_frame_3 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Nanovirus coat protein Baculo_8kDa PF06096.11 NODE_50495_length_364_cov_1.993921_g42595_i0reverse_frame_2 - 1.2 9.3 5.6 5 7.3 1.0 2.4 2 0 0 2 2 2 0 Baculoviridae 8.2 KDa protein AbiEi_4 PF13338.6 NODE_50493_length_364_cov_2.501520_g42593_i0reverse_frame_2 - 0.093 12.9 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin DUF4931 PF16285.5 NODE_50492_length_364_cov_2.537994_g42592_i0forward_frame_2 - 0.062 12.6 0.1 0.079 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4931) CENP-N PF05238.13 NODE_50488_length_364_cov_2.851064_g42588_i0forward_frame_3 - 0.14 11.4 0.1 0.18 11.1 0.1 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Endonuc-BglII PF09195.11 NODE_50484_length_364_cov_3.021277_g42584_i0reverse_frame_3 - 0.1 12.4 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Restriction endonuclease BglII dCache_1 PF02743.18 NODE_50484_length_364_cov_3.021277_g42584_i0reverse_frame_3 - 0.11 12.3 1.9 0.2 11.4 1.9 1.4 1 1 0 1 1 1 0 Cache domain Microcin PF03526.13 NODE_50484_length_364_cov_3.021277_g42584_i0reverse_frame_3 - 0.11 12.3 0.9 0.11 12.3 0.9 1.8 2 0 0 2 2 2 0 Colicin E1 (microcin) immunity protein DUF5389 PF17364.2 NODE_50483_length_364_cov_3.039514_g42583_i0reverse_frame_2 - 0.022 14.8 1.5 0.028 14.5 1.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5389) zf-C2H2 PF00096.26 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 3.8e-10 39.7 8.4 0.00013 22.3 1.0 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 1.7e-06 28.1 3.5 1.7e-06 28.1 3.5 3.1 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 7.4e-06 26.4 7.9 0.0012 19.5 1.2 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_5 PF13909.6 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.00071 19.3 4.8 0.0017 18.1 1.5 2.8 2 1 0 2 2 2 1 C2H2-type zinc-finger domain zf-met PF12874.7 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.0085 16.5 3.3 0.11 12.9 1.0 2.6 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf_CopZ PF18423.1 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.012 15.5 0.5 0.012 15.5 0.5 1.7 2 0 0 2 2 2 0 Zinc binding domain HEPN_Apea PF18739.1 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.019 15.4 1.0 0.028 14.9 1.0 1.2 1 0 0 1 1 1 0 Apea-like HEPN zf-BED PF02892.15 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.023 14.7 3.7 0.023 14.7 3.7 2.0 1 1 1 2 2 2 0 BED zinc finger She2p PF11435.8 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.028 14.1 0.1 0.032 13.9 0.1 1.2 1 0 0 1 1 1 0 RNA binding protein She2p zf-C2H2_jaz PF12171.8 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.033 14.5 1.3 0.033 14.5 1.3 2.8 1 1 1 2 2 2 0 Zinc-finger double-stranded RNA-binding zf_ZIC PF18366.1 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.072 13.2 1.5 8.2 6.6 0.1 2.4 1 1 1 2 2 2 0 Zic proteins zinc finger domain DUF5319 PF17252.2 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.11 12.8 0.5 0.18 12.0 0.4 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5319) zf-C2H2_8 PF15909.5 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.14 12.5 3.6 0.29 11.5 3.7 1.4 1 1 0 1 1 1 0 C2H2-type zinc ribbon zf-C2H2_3rep PF18868.1 NODE_50481_length_364_cov_3.206687_g42581_i0reverse_frame_2 - 0.16 12.7 3.2 3.8 8.2 0.5 2.2 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats Med31 PF05669.12 NODE_50478_length_364_cov_6.118541_g42578_i0forward_frame_2 - 0.0099 15.9 2.2 0.021 14.8 2.2 1.5 1 1 0 1 1 1 1 SOH1 Nodulin_late PF07127.11 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 0.015 15.6 0.4 0.015 15.6 0.4 2.1 2 1 0 2 2 2 0 Late nodulin protein RHD3 PF05879.12 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 0.068 11.3 1.0 0.075 11.2 1.0 1.0 1 0 0 1 1 1 0 Root hair defective 3 GTP-binding protein (RHD3) CbiQ PF02361.16 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 0.079 12.6 11.1 0.082 12.5 11.1 1.1 1 0 0 1 1 1 0 Cobalt transport protein Wzy_C PF04932.15 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 0.13 11.9 4.6 0.15 11.7 4.6 1.2 1 0 0 1 1 1 0 O-Antigen ligase MFS_1_like PF12832.7 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 0.22 10.4 4.8 0.22 10.3 4.8 1.1 1 0 0 1 1 1 0 MFS_1 like family DUF2207 PF09972.9 NODE_50476_length_364_cov_7.401216_g42576_i0reverse_frame_2 - 4.9 5.8 7.8 5.6 5.6 7.8 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2970 PF11174.8 NODE_50476_length_364_cov_7.401216_g42576_i0forward_frame_2 - 0.15 12.0 6.0 4.5 7.2 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2970) DUF2628 PF10947.8 NODE_50476_length_364_cov_7.401216_g42576_i0forward_frame_2 - 6.9 7.1 9.7 9.5 6.6 9.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) UBX PF00789.20 NODE_50474_length_364_cov_10.352584_g42574_i0reverse_frame_2 - 5.6e-09 36.1 0.1 7.9e-09 35.6 0.1 1.2 1 0 0 1 1 1 1 UBX domain RL PF17797.1 NODE_50474_length_364_cov_10.352584_g42574_i0reverse_frame_2 - 0.099 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 RL domain RabGAP-TBC PF00566.18 NODE_50471_length_364_cov_12.665653_g42571_i0reverse_frame_3 - 1.2e-05 25.1 1.0 1.2e-05 25.1 1.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain KH_10 PF17905.1 NODE_50471_length_364_cov_12.665653_g42571_i0reverse_frame_3 - 0.066 13.6 0.2 0.094 13.2 0.2 1.3 1 0 0 1 1 1 0 GLD-3 KH domain 5 LrgB PF04172.16 NODE_50471_length_364_cov_12.665653_g42571_i0forward_frame_3 - 0.19 11.3 1.5 0.2 11.2 1.5 1.2 1 0 0 1 1 1 0 LrgB-like family ABC2_membrane PF01061.24 NODE_50470_length_364_cov_28.550152_g42570_i0forward_frame_2 - 1.2e-10 41.2 0.6 1.2e-10 41.2 0.6 1.5 2 0 0 2 2 2 1 ABC-2 type transporter TraS PF10624.9 NODE_50468_length_364_cov_40.790274_g42568_i0forward_frame_3 - 0.68 9.8 5.6 0.79 9.6 5.6 1.1 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS Bestrophin PF01062.21 NODE_50464_length_364_cov_69.097264_g42564_i0reverse_frame_3 - 0.14 11.5 1.6 0.15 11.4 1.6 1.1 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel EFP PF01132.20 NODE_50463_length_364_cov_70.872340_g42563_i0forward_frame_3 - 0.032 14.3 0.1 8 6.6 0.1 2.3 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain POTRA PF07244.15 NODE_50463_length_364_cov_70.872340_g42563_i0forward_frame_3 - 0.11 13.0 2.4 0.14 12.8 0.6 1.9 1 1 1 2 2 2 0 Surface antigen variable number repeat Bac_surface_Ag PF01103.23 NODE_50463_length_364_cov_70.872340_g42563_i0forward_frame_3 - 0.11 11.9 2.3 0.13 11.8 2.3 1.0 1 0 0 1 1 1 0 Surface antigen DUF2207 PF09972.9 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.0018 17.2 0.0 0.0018 17.1 0.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Orf78 PF06024.12 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.0022 18.3 0.3 0.0028 17.9 0.3 1.2 1 0 0 1 1 1 1 Orf78 (ac78) LRRC37AB_C PF14914.6 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.0045 16.9 0.2 0.0061 16.5 0.2 1.1 1 0 0 1 1 1 1 LRRC37A/B like protein 1 C-terminal domain Synaptobrevin PF00957.21 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.011 15.5 0.4 0.021 14.6 0.4 1.5 1 1 0 1 1 1 0 Synaptobrevin Sigma_reg_N PF13800.6 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.015 15.6 1.7 0.015 15.6 1.7 1.7 2 0 0 2 2 2 0 Sigma factor regulator N-terminal LAP1C PF05609.12 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.018 14.2 0.1 0.019 14.1 0.1 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) DUF5305 PF17231.2 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.021 14.3 0.3 0.03 13.7 0.3 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5305) ABC2_membrane_3 PF12698.7 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.035 13.2 0.5 0.041 13.0 0.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF1218 PF06749.12 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.05 14.1 0.0 0.062 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) DUF5383 PF17355.2 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.056 13.8 0.6 0.094 13.1 0.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5383) RSN1_TM PF13967.6 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.068 12.9 0.8 0.11 12.2 0.8 1.3 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport FixH PF05751.11 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.11 12.5 0.1 0.2 11.7 0.1 1.4 1 0 0 1 1 1 0 FixH PetM PF08041.11 NODE_50462_length_364_cov_70.896657_g42562_i0reverse_frame_2 - 0.61 9.7 4.7 1.1 8.9 4.7 1.4 1 0 0 1 1 1 0 PetM family of cytochrome b6f complex subunit 7 PseudoU_synth_2 PF00849.22 NODE_50453_length_364_cov_107.158055_g42553_i0reverse_frame_3 - 0.00011 22.3 1.6 0.00018 21.6 1.6 1.4 1 0 0 1 1 1 1 RNA pseudouridylate synthase EF-hand_1 PF00036.32 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 1.4e-06 27.4 0.2 2.6e-06 26.6 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 2.2e-05 24.2 0.2 3.4e-05 23.6 0.2 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 2.4e-05 24.7 0.1 3.2e-05 24.3 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 0.00016 21.0 0.2 0.0003 20.1 0.2 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_50452_length_364_cov_107.316109_g42552_i0reverse_frame_3 - 0.0019 18.0 0.1 0.0042 16.9 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain Spo7 PF03907.13 NODE_50451_length_364_cov_111.720365_g42551_i0reverse_frame_3 - 0.039 13.4 0.3 0.056 12.9 0.3 1.5 1 1 0 1 1 1 0 Spo7-like protein CCD PF07860.11 NODE_50450_length_364_cov_116.343465_g42550_i0reverse_frame_3 - 1 9.4 3.9 0.33 11.0 1.5 1.5 2 0 0 2 2 2 0 WisP family C-Terminal Region UPF0542 PF15086.6 NODE_50450_length_364_cov_116.343465_g42550_i0reverse_frame_2 - 0.0011 18.8 1.9 0.0016 18.3 1.9 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0542 SMN PF06003.12 NODE_50450_length_364_cov_116.343465_g42550_i0forward_frame_3 - 0.13 11.5 1.7 0.15 11.3 1.7 1.1 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) Rap_GAP PF02145.15 NODE_50446_length_364_cov_159.115502_g42546_i0forward_frame_3 - 0.14 11.7 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Rap/ran-GAP FH2 PF02181.23 NODE_50445_length_364_cov_168.768997_g42545_i0reverse_frame_2 - 0.12 11.5 0.1 0.14 11.2 0.1 1.0 1 0 0 1 1 1 0 Formin Homology 2 Domain DUF1071 PF06378.11 NODE_50440_length_364_cov_3974.787234_g42540_i0forward_frame_3 - 0.15 11.6 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) Rimk_N PF18030.1 NODE_50437_length_365_cov_1.609091_g42537_i0reverse_frame_3 - 0.079 13.4 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 RimK PreATP-grasp domain PHM7_ext PF12621.8 NODE_50437_length_365_cov_1.609091_g42537_i0reverse_frame_3 - 0.1 12.7 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Extracellular tail, of 10TM putative phosphate transporter FA_desaturase PF00487.24 NODE_50434_length_365_cov_1.842424_g42534_i0forward_frame_2 - 1.4 8.7 7.1 1.6 8.5 7.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase Ist1 PF03398.14 NODE_50430_length_365_cov_1.936364_g42530_i0reverse_frame_3 - 8.2e-07 29.1 0.0 8.7e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 Regulator of Vps4 activity in the MVB pathway Pkinase PF00069.25 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 1.3e-28 100.1 0.0 1.4e-28 100.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 4.8e-10 39.2 0.0 5.3e-10 39.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 0.006 15.9 0.0 0.0075 15.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 0.031 14.2 0.1 0.041 13.8 0.1 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 0.1 11.3 0.0 0.11 11.3 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Kdo PF06293.14 NODE_50429_length_365_cov_1.954545_g42529_i0forward_frame_3 - 0.16 11.3 0.1 0.22 10.9 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family CxC4 PF18717.1 NODE_50428_length_365_cov_2.030303_g42528_i0reverse_frame_2 - 0.19 11.5 7.9 0.13 12.2 6.4 1.4 1 1 0 1 1 1 0 CxC4 like cysteine cluster associated with KDZ transposases Collagen_mid PF15984.5 NODE_50428_length_365_cov_2.030303_g42528_i0forward_frame_3 - 0.22 11.2 0.4 0.36 10.6 0.4 1.2 1 0 0 1 1 1 0 Bacterial collagen, middle region DUF3845 PF12956.7 NODE_50427_length_365_cov_2.048485_g42527_i0reverse_frame_2 - 0.19 11.1 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure PH_2 PF08458.10 NODE_50427_length_365_cov_2.048485_g42527_i0forward_frame_2 - 0.022 15.1 0.2 0.042 14.2 0.2 1.4 1 0 0 1 1 1 0 Plant pleckstrin homology-like region Pap_E4 PF02711.14 NODE_50425_length_365_cov_2.087879_g42525_i0reverse_frame_2 - 0.26 12.2 3.3 0.38 11.7 3.3 1.2 1 0 0 1 1 1 0 E4 protein GlgS PF08971.11 NODE_50422_length_365_cov_2.312121_g42522_i0reverse_frame_2 - 1.4 9.0 4.9 1.5 8.9 3.2 2.0 1 1 0 1 1 1 0 Glycogen synthesis protein Cys_rich_VLP PF14194.6 NODE_50418_length_365_cov_2.536364_g42518_i0forward_frame_2 - 0.79 9.9 6.3 1.5 9.0 5.8 1.7 1 1 0 1 1 1 0 Cysteine-rich VLP Pkinase PF00069.25 NODE_50417_length_365_cov_2.539394_g42517_i0reverse_frame_3 - 1.2e-39 136.3 0.1 1.2e-39 136.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50417_length_365_cov_2.539394_g42517_i0reverse_frame_3 - 4.2e-21 75.4 0.0 4.5e-21 75.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_50417_length_365_cov_2.539394_g42517_i0reverse_frame_3 - 3e-08 32.9 0.1 3.2e-08 32.8 0.1 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_50417_length_365_cov_2.539394_g42517_i0reverse_frame_3 - 0.0003 20.2 0.0 0.00036 19.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 NODE_50417_length_365_cov_2.539394_g42517_i0reverse_frame_3 - 0.00049 20.1 0.1 0.00066 19.7 0.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 NODE_50417_length_365_cov_2.539394_g42517_i0reverse_frame_3 - 0.0022 17.4 0.8 0.0028 17.0 0.8 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 NODE_50417_length_365_cov_2.539394_g42517_i0reverse_frame_3 - 0.0057 15.6 0.0 0.0064 15.5 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RFX_DNA_binding PF02257.15 NODE_50413_length_365_cov_2.930303_g42513_i0reverse_frame_3 - 0.042 14.5 0.8 0.042 14.5 0.8 1.6 2 0 0 2 2 2 0 RFX DNA-binding domain Baculo_VP91_N PF08475.10 NODE_50413_length_365_cov_2.930303_g42513_i0reverse_frame_3 - 0.058 13.1 0.3 0.065 12.9 0.3 1.2 1 0 0 1 1 1 0 Viral capsid protein 91 N-terminal tRNA-synt_1e PF01406.19 NODE_50412_length_365_cov_2.933333_g42512_i0reverse_frame_3 - 3e-27 95.8 2.1 4.2e-27 95.3 2.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain FtsL PF04999.13 NODE_50412_length_365_cov_2.933333_g42512_i0forward_frame_2 - 0.35 10.9 4.3 0.37 10.8 1.1 2.0 2 0 0 2 2 2 0 Cell division protein FtsL Helicase_C_2 PF13307.6 NODE_50411_length_365_cov_2.942424_g42511_i0reverse_frame_3 - 2.7e-13 50.4 0.0 3.2e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Helicase C-terminal domain CotJA PF11007.8 NODE_50409_length_365_cov_3.196970_g42509_i0forward_frame_2 - 0.16 11.8 0.0 16 5.4 0.0 2.2 2 0 0 2 2 2 0 Spore coat associated protein JA (CotJA) SSP160 PF06933.11 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_3 - 0.054 11.7 10.8 0.052 11.8 10.8 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 SSP160 PF06933.11 NODE_50403_length_365_cov_6.963636_g42503_i0reverse_frame_2 - 4.9 5.2 23.6 5.8 5.0 23.6 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 RIFIN PF02009.16 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.0013 18.7 0.1 0.0015 18.5 0.1 1.1 1 0 0 1 1 1 1 Rifin Rax2 PF12768.7 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.0029 17.1 3.8 0.0036 16.8 3.8 1.1 1 0 0 1 1 1 1 Cortical protein marker for cell polarity TMEM154 PF15102.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.003 17.5 1.5 0.0043 16.9 1.5 1.2 1 0 0 1 1 1 1 TMEM154 protein family Renin_r PF07850.14 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.022 15.4 0.6 0.028 15.0 0.6 1.2 1 0 0 1 1 1 0 Renin receptor-like protein Apt1 PF10351.9 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.04 12.8 2.1 0.042 12.7 2.1 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Amnionless PF14828.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.056 12.3 2.0 0.064 12.1 2.0 1.1 1 0 0 1 1 1 0 Amnionless Shisa PF13908.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.27 11.5 12.7 0.56 10.4 12.7 1.6 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF4448 PF14610.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.3 10.8 4.8 0.49 10.1 4.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4448) LRRC37AB_C PF14914.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 0.87 9.5 8.5 4.4 7.2 8.5 1.9 1 1 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain DUF4614 PF15391.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 1.1 9.3 11.2 1.3 9.0 11.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) Orf78 PF06024.12 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 1.1 9.6 12.3 3.8 7.9 12.3 1.7 1 1 0 1 1 1 0 Orf78 (ac78) CCDC106 PF15794.5 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 1.2 8.8 6.9 1.5 8.4 6.9 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 DUF5383 PF17355.2 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 1.7 9.0 3.6 3.1 8.2 3.6 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5383) SR-25 PF10500.9 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_3 - 3.3 7.3 24.7 5 6.7 24.7 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein SID-1_RNA_chan PF13965.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_2 - 0.052 12.0 0.7 0.056 11.9 0.7 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 SR-25 PF10500.9 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_2 - 0.32 10.6 14.6 0.36 10.4 14.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein EphA2_TM PF14575.6 NODE_50403_length_365_cov_6.963636_g42503_i0forward_frame_2 - 0.49 11.3 6.6 0.87 10.5 6.6 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain RAP PF08373.10 NODE_50399_length_365_cov_44.927273_g42499_i0forward_frame_3 - 0.027 14.6 0.1 0.055 13.6 0.1 1.6 1 1 0 1 1 1 0 RAP domain Sec62 PF03839.16 NODE_50398_length_365_cov_54.651515_g42498_i0forward_frame_3 - 0.18 11.3 6.2 0.25 10.8 6.2 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 EBV-NA1 PF02905.14 NODE_50396_length_365_cov_58.339394_g42496_i0reverse_frame_3 - 0.18 11.6 0.9 0.24 11.2 0.6 1.3 1 1 0 1 1 1 0 Epstein Barr virus nuclear antigen-1, DNA-binding domain DEC-1_N PF04625.13 NODE_50396_length_365_cov_58.339394_g42496_i0reverse_frame_3 - 0.42 9.6 3.2 0.43 9.5 3.2 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DUF3515 PF12028.8 NODE_50396_length_365_cov_58.339394_g42496_i0forward_frame_2 - 0.072 12.8 1.4 1.4 8.6 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3515) 7TM_GPCR_Sru PF10322.9 NODE_50395_length_365_cov_58.463636_g42495_i0reverse_frame_3 - 0.6 9.4 12.6 0.78 9.0 12.6 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru Cu PF17563.2 NODE_50395_length_365_cov_58.463636_g42495_i0forward_frame_3 - 0.049 13.8 0.0 0.1 12.8 0.0 1.5 1 0 0 1 1 1 0 Cupiennin Sod_Ni PF09055.11 NODE_50395_length_365_cov_58.463636_g42495_i0forward_frame_3 - 0.052 14.1 0.1 0.08 13.5 0.1 1.2 1 0 0 1 1 1 0 Nickel-containing superoxide dismutase PARP PF00644.20 NODE_50395_length_365_cov_58.463636_g42495_i0forward_frame_3 - 0.055 13.1 0.3 0.056 13.0 0.3 1.2 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain oligo_HPY PF08352.12 NODE_50395_length_365_cov_58.463636_g42495_i0forward_frame_2 - 0.067 13.7 3.9 0.067 13.7 3.9 3.1 3 0 0 3 3 3 0 Oligopeptide/dipeptide transporter, C-terminal region DUF4215 PF13948.6 NODE_50393_length_365_cov_61.275758_g42493_i0forward_frame_2 - 1.6e-07 31.6 11.7 1.6e-07 31.6 11.7 2.2 1 1 1 2 2 2 1 Domain of unknown function (DUF4215) RNase_T PF00929.24 NODE_50391_length_365_cov_62.487879_g42491_i0forward_frame_2 - 0.0031 18.1 0.0 0.0042 17.6 0.0 1.2 1 0 0 1 1 1 1 Exonuclease Sec62 PF03839.16 NODE_50385_length_365_cov_83.575758_g42485_i0reverse_frame_2 - 1.5 8.3 6.8 1.8 8.0 6.8 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 UPF0203 PF05254.12 NODE_50385_length_365_cov_83.575758_g42485_i0reverse_frame_2 - 3.5 8.0 9.1 2.2 8.6 1.3 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0203) Ribosomal_S27 PF01599.19 NODE_50382_length_365_cov_90.121212_g42482_i0reverse_frame_2 - 0.021 15.0 0.5 0.021 15.0 0.5 1.7 2 0 0 2 2 2 0 Ribosomal protein S27a LAP1C PF05609.12 NODE_50382_length_365_cov_90.121212_g42482_i0forward_frame_2 - 0.34 9.9 0.2 0.38 9.8 0.2 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) SET PF00856.28 NODE_50380_length_365_cov_99.539394_g42480_i0forward_frame_2 - 9.7e-10 39.1 0.0 1.2e-09 38.8 0.0 1.2 1 0 0 1 1 1 1 SET domain DUF1493 PF07377.12 NODE_50372_length_365_cov_151.924242_g42472_i0reverse_frame_3 - 0.019 15.4 0.1 0.026 15.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) Porin_OmpG_1_2 PF16946.5 NODE_50372_length_365_cov_151.924242_g42472_i0reverse_frame_2 - 0.11 11.8 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 OMPG-porin 1 family B12-binding PF02310.19 NODE_50371_length_365_cov_155.515152_g42471_i0reverse_frame_2 - 5.3e-07 29.7 0.0 7e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 B12 binding domain Aldo_ket_red PF00248.21 NODE_50370_length_365_cov_168.875758_g42470_i0reverse_frame_3 - 5.3e-15 55.4 0.0 6.2e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family LysM PF01476.20 NODE_50370_length_365_cov_168.875758_g42470_i0reverse_frame_3 - 0.038 14.1 0.1 0.64 10.1 0.0 2.2 2 0 0 2 2 2 0 LysM domain Inositol_P PF00459.25 NODE_50370_length_365_cov_168.875758_g42470_i0forward_frame_2 - 0.068 12.7 0.0 0.077 12.5 0.0 1.1 1 0 0 1 1 1 0 Inositol monophosphatase family EF-hand_1 PF00036.32 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 5.6e-09 34.9 0.6 9.7e-09 34.2 0.6 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 3.8e-07 29.5 0.3 8.1e-07 28.5 0.3 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 5.9e-07 29.8 0.1 1.1e-06 28.9 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 3.8e-06 26.6 0.3 6.2e-06 26.0 0.3 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 5.5e-06 25.6 1.4 1e-05 24.8 1.4 1.4 1 0 0 1 1 1 1 EF hand EF-hand_4 PF12763.7 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 0.021 14.8 0.2 0.043 13.8 0.1 1.4 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EF-hand_14 PF17959.1 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 0.097 13.0 0.2 0.14 12.5 0.2 1.4 1 1 0 1 1 1 0 EF-hand domain EF-hand_10 PF14788.6 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 0.11 12.4 0.3 0.17 11.8 0.3 1.3 1 0 0 1 1 1 0 EF hand YfdX PF10938.8 NODE_50368_length_365_cov_174.815152_g42468_i0reverse_frame_2 - 0.13 12.2 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 YfdX protein CD20 PF04103.15 NODE_50368_length_365_cov_174.815152_g42468_i0forward_frame_3 - 0.014 15.5 2.0 0.017 15.2 2.0 1.1 1 0 0 1 1 1 0 CD20-like family EMC3_TMCO1 PF01956.16 NODE_50367_length_365_cov_176.760606_g41919_i1reverse_frame_2 - 0.12 12.1 0.3 6.5 6.4 0.1 2.1 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like DUF2663 PF10864.8 NODE_50367_length_365_cov_176.760606_g41919_i1reverse_frame_2 - 0.12 12.8 2.9 0.16 12.4 2.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2663) Cadherin_tail PF15974.5 NODE_50361_length_365_cov_411.336364_g42462_i0reverse_frame_3 - 0.24 11.8 2.6 0.32 11.3 2.6 1.2 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region Ig_5 PF16681.5 NODE_50345_length_366_cov_2.166163_g42447_i0reverse_frame_3 - 0.017 15.5 1.7 0.028 14.8 1.7 1.4 1 0 0 1 1 1 0 Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain DDE_3 PF13358.6 NODE_50342_length_366_cov_2.453172_g42444_i0reverse_frame_2 - 6.8e-06 25.9 0.0 7.9e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF1581 PF07619.11 NODE_50336_length_366_cov_2.966767_g42438_i0reverse_frame_3 - 0.042 14.0 0.0 0.08 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1581) DUF4481 PF14800.6 NODE_50336_length_366_cov_2.966767_g42438_i0forward_frame_2 - 0.19 11.2 0.6 0.25 10.8 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) Sporozoite_P67 PF05642.11 NODE_50331_length_366_cov_24.268882_g42433_i0reverse_frame_3 - 0.0062 14.7 5.8 0.0066 14.6 5.8 1.0 1 0 0 1 1 1 1 Sporozoite P67 surface antigen Mucin PF01456.17 NODE_50331_length_366_cov_24.268882_g42433_i0reverse_frame_3 - 0.012 15.7 25.1 0.013 15.5 25.1 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein MGC-24 PF05283.11 NODE_50331_length_366_cov_24.268882_g42433_i0reverse_frame_3 - 1.2 9.6 15.4 1.6 9.2 15.4 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin SSP160 PF06933.11 NODE_50331_length_366_cov_24.268882_g42433_i0reverse_frame_3 - 2.4 6.2 22.7 2.4 6.2 22.7 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF3311 PF11755.8 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 0.016 15.1 3.8 0.034 14.1 3.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3311) TadF PF16964.5 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 0.083 12.6 0.2 0.096 12.4 0.2 1.1 1 0 0 1 1 1 0 Putative tight adherence pilin protein F DUF929 PF06053.11 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 0.19 11.0 1.4 0.2 11.0 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF929) Orf78 PF06024.12 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 0.58 10.5 2.5 0.86 9.9 2.5 1.3 1 0 0 1 1 1 0 Orf78 (ac78) ECSCR PF15820.5 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 1 9.2 11.5 1.6 8.6 11.5 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF2771 PF10969.8 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 1.7 8.7 7.8 3.8 7.5 7.7 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2771) Baculo_11_kDa PF06143.11 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 2.2 7.9 8.0 4.2 7.0 8.0 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family RCR PF12273.8 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 4.2 8.1 5.2 4.9 7.8 5.2 1.4 1 1 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red TMEM154 PF15102.6 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 4.5 7.2 5.7 7.2 6.5 5.7 1.3 1 0 0 1 1 1 0 TMEM154 protein family EphA2_TM PF14575.6 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 5.1 8.1 10.0 6.5 7.7 10.0 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain HemY_N PF07219.13 NODE_50331_length_366_cov_24.268882_g42433_i0forward_frame_3 - 8.6 6.6 6.9 13 6.1 6.9 1.4 1 0 0 1 1 1 0 HemY protein N-terminus RST PF12174.8 NODE_50330_length_366_cov_28.157100_g42432_i0reverse_frame_2 - 0.025 14.5 0.9 0.025 14.5 0.9 1.7 2 0 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain Noggin PF05806.12 NODE_50328_length_366_cov_32.649547_g42430_i0forward_frame_3 - 0.12 12.3 0.1 0.15 11.9 0.1 1.1 1 0 0 1 1 1 0 Noggin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks217.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks217.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks217.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks217.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Trp_DMAT PF11991.8 NODE_50324_length_366_cov_62.483384_g42426_i0reverse_frame_3 - 0.021 14.3 0.2 0.026 13.9 0.2 1.1 1 0 0 1 1 1 0 Tryptophan dimethylallyltransferase PPK2 PF03976.14 NODE_50321_length_366_cov_72.897281_g42423_i0forward_frame_3 - 0.16 11.5 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 Polyphosphate kinase 2 (PPK2) zf-CSL PF05207.13 NODE_50321_length_366_cov_72.897281_g42423_i0forward_frame_2 - 0.026 14.2 0.2 0.051 13.3 0.2 1.5 1 0 0 1 1 1 0 CSL zinc finger AmoC PF04896.12 NODE_50320_length_366_cov_74.595166_g42422_i0reverse_frame_3 - 0.026 13.8 0.3 0.03 13.6 0.3 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C ANKH PF07260.11 NODE_50314_length_366_cov_87.102719_g42416_i0forward_frame_2 - 0.0016 17.7 0.3 0.0022 17.3 0.3 1.1 1 0 0 1 1 1 1 Progressive ankylosis protein (ANKH) Pho86 PF11124.8 NODE_50314_length_366_cov_87.102719_g42416_i0forward_frame_2 - 0.065 12.7 5.2 0.078 12.4 5.2 1.1 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 SatRNA_48 PF17485.2 NODE_50313_length_366_cov_90.051360_g42415_i0forward_frame_2 - 0.11 11.6 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Satellite RNA 48 kDa protein SMN PF06003.12 NODE_50312_length_366_cov_91.398792_g42414_i0reverse_frame_2 - 1.2 8.4 4.0 1.4 8.1 4.0 1.1 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) DUF1281 PF06924.11 NODE_50312_length_366_cov_91.398792_g42414_i0forward_frame_2 - 0.082 12.4 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) HEAT PF02985.22 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.00041 20.4 0.7 0.94 9.9 0.3 2.3 2 0 0 2 2 2 2 HEAT repeat Cnd1 PF12717.7 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.0038 17.3 0.0 0.0084 16.2 0.0 1.5 1 1 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Cohesin_HEAT PF12765.7 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.012 15.9 0.3 0.32 11.3 0.0 2.2 2 0 0 2 2 2 0 HEAT repeat associated with sister chromatid cohesion HEAT_2 PF13646.6 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.014 15.7 0.3 0.085 13.3 0.2 1.8 1 1 0 1 1 1 0 HEAT repeats CLASP_N PF12348.8 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.026 14.1 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 CLASP N terminal M11L PF11099.8 NODE_50309_length_366_cov_96.353474_g42411_i0reverse_frame_2 - 0.053 13.8 0.0 1.2 9.4 0.0 2.0 1 1 1 2 2 2 0 Apoptosis regulator M11L like SYCE1 PF15233.6 NODE_50308_length_366_cov_98.546828_g42410_i0forward_frame_2 - 0.012 15.7 24.0 0.016 15.3 24.0 1.3 1 0 0 1 1 1 0 Synaptonemal complex central element protein 1 IL10 PF00726.17 NODE_50307_length_366_cov_100.256798_g42409_i0reverse_frame_3 - 0.16 11.5 0.6 0.2 11.2 0.6 1.2 1 0 0 1 1 1 0 Interleukin 10 Keratin_B2_2 PF13885.6 NODE_50307_length_366_cov_100.256798_g42409_i0forward_frame_3 - 0.013 15.5 5.5 0.013 15.5 5.5 2.1 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein Toxin_3 PF00537.18 NODE_50306_length_366_cov_104.368580_g42408_i0reverse_frame_2 - 0.046 13.9 0.9 0.075 13.2 0.9 1.3 1 0 0 1 1 1 0 Scorpion toxin-like domain Fip1 PF05182.13 NODE_50304_length_366_cov_108.018127_g42406_i0forward_frame_2 - 0.084 12.4 0.8 0.19 11.3 0.8 1.5 1 0 0 1 1 1 0 Fip1 motif Evr1_Alr PF04777.13 NODE_50303_length_366_cov_117.311178_g42405_i0forward_frame_3 - 0.0019 18.6 0.0 0.0022 18.4 0.0 1.1 1 0 0 1 1 1 1 Erv1 / Alr family DUF1556 PF07590.11 NODE_50303_length_366_cov_117.311178_g42405_i0forward_frame_3 - 0.031 14.6 0.1 0.068 13.5 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1556) tRNA_NucTran2_2 PF13735.6 NODE_50302_length_366_cov_130.323263_g42404_i0reverse_frame_2 - 0.077 13.0 0.1 0.16 12.0 0.0 1.5 1 1 1 2 2 2 0 tRNA nucleotidyltransferase domain 2 putative DUF4460 PF14687.6 NODE_50301_length_366_cov_131.909366_g42403_i0reverse_frame_3 - 0.049 13.7 0.0 0.054 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) Arrestin_N PF00339.29 NODE_50298_length_366_cov_159.794562_g42400_i0reverse_frame_2 - 0.029 14.4 0.0 0.033 14.3 0.0 1.2 1 0 0 1 1 1 0 Arrestin (or S-antigen), N-terminal domain OrfA PF17495.2 NODE_50297_length_366_cov_165.507553_g42399_i0reverse_frame_3 - 0.0015 18.7 1.3 0.0015 18.7 1.3 1.6 2 0 0 2 2 2 1 Vpr-like OrfA TCR PF03638.15 NODE_50297_length_366_cov_165.507553_g42399_i0forward_frame_2 - 0.062 13.6 11.3 1.1 9.6 1.9 2.3 2 0 0 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain RDD PF06271.12 NODE_50297_length_366_cov_165.507553_g42399_i0forward_frame_2 - 0.62 10.3 6.9 1.2 9.4 6.9 1.4 1 1 0 1 1 1 0 RDD family ATP-synt_8 PF00895.20 NODE_50297_length_366_cov_165.507553_g42399_i0forward_frame_2 - 8.1 7.0 12.2 5 7.7 1.2 2.7 2 0 0 2 2 2 0 ATP synthase protein 8 Nup54 PF13874.6 NODE_50293_length_366_cov_199.882175_g42395_i0forward_frame_2 - 0.074 13.2 0.0 0.15 12.2 0.0 1.5 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 RCC1_2 PF13540.6 NODE_50291_length_366_cov_226.936556_g42393_i0reverse_frame_2 - 9.6e-07 28.4 0.1 0.043 13.6 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PTS_2-RNA PF01885.16 NODE_50291_length_366_cov_226.936556_g42393_i0forward_frame_3 - 0.17 11.9 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family DUF2071 PF09844.9 NODE_50291_length_366_cov_226.936556_g42393_i0forward_frame_2 - 0.0094 15.6 1.2 0.011 15.4 1.2 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (COG2071) zf-LITAF-like PF10601.9 NODE_50289_length_366_cov_294.099698_g42391_i0forward_frame_2 - 6.6 7.1 6.4 4.7 7.6 2.3 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain HXXEE PF13787.6 NODE_50288_length_366_cov_392.410876_g42390_i0forward_frame_3 - 0.067 14.0 0.9 0.087 13.6 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif PSI_PsaH PF03244.14 NODE_50288_length_366_cov_392.410876_g42390_i0forward_frame_2 - 0.34 10.4 0.5 0.46 10.0 0.5 1.2 1 0 0 1 1 1 0 Photosystem I reaction centre subunit VI zf-Tim10_DDP PF02953.15 NODE_50286_length_366_cov_3374.864048_g42388_i0reverse_frame_2 - 2.2e-08 33.6 8.2 2.2e-08 33.6 8.2 2.2 2 0 0 2 2 2 2 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 NODE_50286_length_366_cov_3374.864048_g42388_i0reverse_frame_2 - 0.12 13.0 1.0 0.2 12.3 0.2 1.6 1 1 1 2 2 2 0 Coronavirus non-structural protein NS2 DUF1071 PF06378.11 NODE_50285_length_366_cov_3950.830816_g42387_i0forward_frame_2 - 0.15 11.6 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1071) Glycolytic PF00274.19 NODE_50284_length_366_cov_5206.045317_g42386_i0reverse_frame_2 - 2.9e-05 23.0 0.2 4.4e-05 22.4 0.2 1.3 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I UPF0547 PF10571.9 ORF99923 - 0.53 10.4 8.4 2 8.5 0.2 2.7 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 DUF4010 PF13194.6 ORF99887 - 0.055 13.1 0.1 0.072 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4010) DUF2555 PF10742.9 ORF9957 - 0.074 12.9 0.1 1.2 9.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2555) FcoT PF10862.8 ORF9957 - 0.18 11.4 1.5 1.3 8.6 0.3 2.0 1 1 1 2 2 2 0 FcoT-like thioesterase domain INCENP_N PF12178.8 ORF9957 - 0.26 11.3 0.6 1.1 9.3 0.2 2.1 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal Vwaint PF14624.6 ORF99011 - 0.027 14.6 0.0 0.059 13.5 0.0 1.5 1 0 0 1 1 1 0 VWA / Hh protein intein-like INCENP_ARK-bind PF03941.15 ORF98232 - 0.18 11.8 0.0 0.31 11.0 0.0 1.3 1 0 0 1 1 1 0 Inner centromere protein, ARK binding region DUF3744 PF12558.8 ORF98096 - 0.085 13.6 0.7 0.26 12.1 0.4 2.0 1 1 1 2 2 2 0 ATP-binding cassette cobalt transporter DHHC PF01529.20 ORF96646 - 1.6 8.9 8.6 2.4 8.3 8.6 1.3 1 1 0 1 1 1 0 DHHC palmitoyltransferase Tmemb_170 PF10190.9 ORF9542 - 0.28 11.6 6.6 0.33 11.4 6.6 1.1 1 0 0 1 1 1 0 Putative transmembrane protein 170 Herpes_heli_pri PF05774.11 ORF9327 - 0.23 11.7 0.5 0.28 11.4 0.5 1.2 1 0 0 1 1 1 0 Herpesvirus helicase-primase complex component UAA PF08449.11 ORF92576 - 6.7e-06 25.5 0.1 7.5e-06 25.4 0.1 1.1 1 0 0 1 1 1 1 UAA transporter family Ig_J_chain PF15097.6 ORF92407 - 0.13 12.2 0.3 0.15 12.0 0.3 1.3 1 0 0 1 1 1 0 Immunoglobulin J chain PLL PF18587.1 ORF92178 - 0.062 13.4 0.6 0.28 11.3 0.6 1.9 1 1 0 1 1 1 0 PTX/LNS-Like (PLL) domain DUF1496 PF07383.12 ORF92178 - 0.13 11.9 0.3 0.42 10.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1496) DUF3716 PF12511.8 ORF90135 - 0.052 13.6 10.4 0.69 10.0 1.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3716) zf-Tim10_DDP PF02953.15 ORF90104 - 1.2 8.8 4.4 2.1 8.0 4.4 1.4 1 0 0 1 1 1 0 Tim10/DDP family zinc finger DNA_ligase_ZBD PF03119.16 ORF898 - 0.05 13.6 0.1 0.05 13.6 0.1 2.6 3 0 0 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain Flu_M1_C PF08289.11 ORF89379 - 0.15 12.3 0.1 0.22 11.8 0.1 1.3 1 0 0 1 1 1 0 Influenza Matrix protein (M1) C-terminal domain DUF5591 PF17884.1 ORF88023 - 0.12 12.2 0.0 0.34 10.7 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5591) ELMO_CED12 PF04727.13 ORF87313 - 0.12 12.5 0.2 0.13 12.3 0.2 1.2 1 0 0 1 1 1 0 ELMO/CED-12 family AgrB PF04647.15 ORF86522 - 0.00085 18.7 2.0 0.0011 18.3 2.0 1.2 1 0 0 1 1 1 1 Accessory gene regulator B DUF4305 PF14146.6 ORF85531 - 0.033 14.4 0.0 0.061 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4305) Phospho_p8 PF10195.9 ORF8406 - 0.01 16.3 0.9 0.58 10.7 0.1 2.3 2 0 0 2 2 2 0 DNA-binding nuclear phosphoprotein p8 CENP-R PF06729.12 ORF8406 - 0.019 14.9 1.1 0.024 14.6 1.1 1.2 1 0 0 1 1 1 0 Kinetochore component, CENP-R GP24_25 PF17388.2 ORF8406 - 0.041 13.9 1.1 0.041 13.9 1.1 1.9 1 1 1 2 2 2 0 Tail assembly gene products 24 & 25 MCR_beta PF02241.18 ORF8406 - 0.22 11.1 0.3 0.6 9.7 0.3 1.7 1 1 0 1 1 1 0 Methyl-coenzyme M reductase beta subunit, C-terminal domain NinF PF05810.12 ORF83638 - 0.063 13.1 0.2 0.09 12.7 0.2 1.2 1 0 0 1 1 1 0 NinF protein RasGEF_N PF00618.20 ORF82267 - 0.51 10.6 8.5 4.8 7.5 8.5 2.0 1 1 0 1 1 1 0 RasGEF N-terminal motif Get5_bdg PF16843.5 ORF82267 - 2 8.0 4.8 3.9 7.0 0.3 2.5 1 1 1 2 2 2 0 Binding domain to Get4 on Get5, Golgi to ER traffic protein adh_short_C2 PF13561.6 ORF81991 - 0.00049 19.7 0.0 0.00052 19.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF81991 - 0.0073 15.8 0.1 0.012 15.1 0.1 1.3 1 0 0 1 1 1 1 short chain dehydrogenase DUF1864 PF08933.11 ORF81526 - 0.11 11.3 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1864) Osmo_MPGsynth PF09488.10 ORF79136 - 0.015 14.0 0.1 0.019 13.7 0.1 1.1 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) SBE2 PF17076.5 ORF79136 - 0.17 10.1 0.1 0.17 10.1 0.1 1.0 1 0 0 1 1 1 0 SBE2, cell-wall formation ATF7IP_BD PF16788.5 ORF77099 - 0.012 15.7 2.6 0.014 15.5 2.6 1.1 1 0 0 1 1 1 0 ATF-interacting protein binding domain DUF1640 PF07798.11 ORF77099 - 0.034 14.2 1.4 0.033 14.2 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) Integrase_Zn PF02022.19 ORF76836 - 0.027 14.4 3.0 0.68 9.9 0.1 2.4 2 0 0 2 2 2 0 Integrase Zinc binding domain Apocytochr_F_C PF01333.19 ORF76155 - 8.6e-08 32.2 0.2 1.2e-07 31.8 0.2 1.2 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF1033 PF06279.11 ORF74250 - 0.027 14.6 1.2 0.027 14.6 1.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1033) 5_nucleotid_C PF02872.18 ORF74067 - 0.033 14.4 0.0 0.057 13.6 0.0 1.3 1 0 0 1 1 1 0 5'-nucleotidase, C-terminal domain DUF3961 PF13106.6 ORF74067 - 0.18 11.4 0.5 1.9 8.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3961) Bystin PF05291.11 ORF73465 - 0.062 12.6 0.1 0.078 12.2 0.1 1.1 1 0 0 1 1 1 0 Bystin RP853 PF17542.2 ORF7299 - 0.015 14.5 1.7 0.014 14.5 1.7 1.1 1 0 0 1 1 1 0 Uncharacterized RP853 DnaB_2 PF07261.11 ORF7299 - 0.024 14.4 3.2 2.4 8.0 0.1 2.7 2 1 0 2 2 2 0 Replication initiation and membrane attachment DUF1465 PF07323.12 ORF7299 - 0.064 13.1 0.3 0.082 12.8 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1465) DHHC PF01529.20 ORF72856 - 1.6 8.9 8.6 2.4 8.3 8.6 1.3 1 1 0 1 1 1 0 DHHC palmitoyltransferase Mob_Pre PF01076.19 ORF71809 - 0.046 13.5 0.0 0.061 13.1 0.0 1.1 1 0 0 1 1 1 0 Plasmid recombination enzyme S8_pro-domain PF16470.5 ORF71809 - 0.16 12.7 0.0 0.26 12.1 0.0 1.3 1 0 0 1 1 1 0 Peptidase S8 pro-domain EF-hand_1 PF00036.32 ORF70656 - 3.1e-08 32.6 4.1 0.0014 18.1 0.2 3.0 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF70656 - 4.7e-08 32.2 3.0 0.00049 19.5 0.8 2.5 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF70656 - 3.5e-06 27.3 0.2 4.6e-06 26.9 0.2 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_6 PF13405.6 ORF70656 - 1e-05 25.0 2.9 0.025 14.5 0.1 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF70656 - 3.4e-05 24.2 2.7 0.00036 20.9 1.8 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF70656 - 0.011 15.5 6.3 0.031 14.1 0.1 2.8 2 1 1 3 3 3 0 EF-hand domain pair DUF3930 PF13067.6 ORF70656 - 0.15 12.4 2.8 10 6.5 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3930) DnaJ_C PF01556.18 ORF69994 - 0.021 14.9 0.0 0.76 9.9 0.0 2.1 1 1 0 1 1 1 0 DnaJ C terminal domain DSPc PF00782.20 ORF69941 - 2.1e-09 37.3 0.3 2.1e-09 37.3 0.3 2.0 2 1 1 3 3 3 1 Dual specificity phosphatase, catalytic domain U1snRNP70_N PF12220.8 ORF69395 - 4e-08 33.8 0.2 5.5e-08 33.3 0.2 1.2 1 0 0 1 1 1 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal RNA_POL_M_15KD PF02150.16 ORF68275 - 0.0027 17.5 0.9 0.06 13.2 0.1 2.4 1 1 1 2 2 2 2 RNA polymerases M/15 Kd subunit UPAR_LY6 PF00021.21 ORF67587 - 0.078 13.7 2.2 0.15 12.7 2.2 1.5 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Thi4 PF01946.17 ORF67181 - 0.11 11.7 0.3 0.15 11.3 0.3 1.2 1 0 0 1 1 1 0 Thi4 family zf-Tim10_DDP PF02953.15 ORF66437 - 1.2 8.8 4.4 2.1 8.0 4.4 1.4 1 0 0 1 1 1 0 Tim10/DDP family zinc finger UvrD_C_2 PF13538.6 ORF6506 - 0.065 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain Osmo_MPGsynth PF09488.10 ORF64892 - 0.015 14.0 0.1 0.019 13.7 0.1 1.1 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) SBE2 PF17076.5 ORF64892 - 0.17 10.1 0.1 0.17 10.1 0.1 1.0 1 0 0 1 1 1 0 SBE2, cell-wall formation Cas6b_N PF17955.1 ORF6470 - 0.02 15.0 0.0 1.8 8.7 0.0 2.2 1 1 1 2 2 2 0 Cas6b N-terminal domain Adeno_100 PF02438.16 ORF64506 - 1.9 6.6 11.0 2 6.5 11.0 1.1 1 0 0 1 1 1 0 Late 100kD protein UPF0154 PF03672.13 ORF63958 - 0.26 11.4 5.7 0.28 11.3 0.3 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0154) DUF2555 PF10742.9 ORF63755 - 0.074 12.9 0.1 1.2 9.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2555) FcoT PF10862.8 ORF63755 - 0.18 11.4 1.5 1.3 8.6 0.3 2.0 1 1 1 2 2 2 0 FcoT-like thioesterase domain INCENP_N PF12178.8 ORF63755 - 0.26 11.3 0.6 1.1 9.3 0.2 2.1 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal DUF3678 PF12435.8 ORF62839 - 0.96 8.9 5.9 2.5 7.5 1.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) RbsD_FucU PF05025.13 ORF62518 - 1.4e-27 96.7 0.0 1.6e-27 96.6 0.0 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family HEV_ORF1 PF02444.16 ORF62326 - 1.3 9.6 7.2 0.35 11.5 0.9 2.1 2 0 0 2 2 2 0 Hepatitis E virus ORF-2 (Putative capsid protein) DUF2162 PF09930.9 ORF61885 - 0.026 13.9 3.6 0.036 13.5 3.6 1.4 1 1 0 1 1 1 0 Predicted transporter (DUF2162) SMN PF06003.12 ORF61574 - 9.3 5.4 8.8 1 8.6 4.4 1.6 1 1 1 2 2 2 0 Survival motor neuron protein (SMN) Sterile PF03015.19 ORF61373 - 0.0062 16.7 0.9 0.009 16.2 0.9 1.4 1 0 0 1 1 1 1 Male sterility protein EF-hand_1 PF00036.32 ORF60870 - 3.2e-08 32.6 4.1 0.0014 18.1 0.2 3.0 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF60870 - 4.8e-08 32.1 3.0 0.00049 19.5 0.8 2.5 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF60870 - 2.7e-06 27.7 0.1 3.5e-06 27.3 0.1 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_6 PF13405.6 ORF60870 - 1e-05 25.0 2.9 0.025 14.5 0.1 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF60870 - 3e-05 24.4 2.5 0.00037 20.9 1.8 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF60870 - 0.011 15.6 6.3 0.031 14.1 0.1 2.8 2 1 1 3 3 3 0 EF-hand domain pair DUF1043 PF06295.12 ORF60870 - 0.021 14.8 1.3 0.033 14.2 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) Chordopox_A13L PF05961.11 ORF60870 - 0.058 13.6 0.0 0.088 13.1 0.0 1.3 1 0 0 1 1 1 0 Chordopoxvirus A13L protein O-antigen_lig PF13425.6 ORF60870 - 0.15 10.8 0.5 0.14 10.9 0.5 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3450 PF11932.8 ORF60213 - 0.0019 17.6 4.3 0.0023 17.3 4.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Phasin PF05597.11 ORF60213 - 0.093 12.7 5.8 0.28 11.2 5.8 1.8 1 1 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF948 PF06103.11 ORF60213 - 0.095 13.0 1.7 0.38 11.0 0.2 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Syntaxin-6_N PF09177.11 ORF60213 - 0.17 12.5 4.6 0.62 10.7 4.6 1.9 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Fib_alpha PF08702.10 ORF60213 - 1.2 9.3 8.5 2.3 8.4 8.5 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ABC_tran_CTD PF16326.5 ORF60213 - 1.9 8.8 6.7 5.4 7.4 0.1 3.2 2 1 1 3 3 3 0 ABC transporter C-terminal domain HTH_Tnp_1 PF01527.20 ORF56164 - 1.4e-22 79.8 2.0 2.6e-22 78.9 1.0 1.8 2 0 0 2 2 2 1 Transposase HTH_23 PF13384.6 ORF56164 - 8.9e-05 22.2 0.1 0.00017 21.3 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain CENP-B_N PF04218.13 ORF56164 - 0.00055 19.5 0.1 0.001 18.6 0.1 1.4 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain HTH_28 PF13518.6 ORF56164 - 0.00064 19.8 1.8 0.00094 19.3 0.0 2.2 2 1 1 3 3 3 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 ORF56164 - 0.0029 17.0 1.5 0.0043 16.4 0.1 2.0 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 BTD PF09270.10 ORF56164 - 0.033 14.4 0.0 0.037 14.2 0.0 1.1 1 0 0 1 1 1 0 Beta-trefoil DNA-binding domain DUF4982 PF16355.5 ORF56164 - 0.036 14.0 0.3 0.35 10.9 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4982) DUF4194 PF13835.6 ORF56164 - 0.064 13.0 0.4 0.082 12.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4194) Atg8 PF02991.16 ORF56073 - 1.2e-24 86.4 0.1 1.4e-24 86.2 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like Glyco_transf_25 PF01755.17 ORF54327 - 2.4e-12 47.1 0.0 2.4e-12 47.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) KCNQ_channel PF03520.14 ORF53223 - 0.019 14.8 0.1 0.025 14.4 0.1 1.2 1 0 0 1 1 1 0 KCNQ voltage-gated potassium channel zf-Di19 PF05605.12 ORF5315 - 2.7e-08 34.0 3.5 7e-05 23.0 0.2 2.2 2 0 0 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_4 PF13894.6 ORF5315 - 4.9e-08 33.2 1.8 0.0094 16.7 0.3 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF5315 - 1.3e-06 28.6 1.5 0.032 14.7 0.2 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2HC_2 PF13913.6 ORF5315 - 4.1e-05 23.4 1.5 0.00024 20.9 0.1 2.2 2 0 0 2 2 2 1 zinc-finger of a C2HC-type Rad50_zn_hook PF04423.14 ORF5315 - 0.00022 21.0 0.4 0.15 12.0 0.0 2.3 2 0 0 2 2 2 2 Rad50 zinc hook motif FYVE PF01363.21 ORF5315 - 0.00095 19.3 0.2 0.42 10.8 0.0 2.3 2 0 0 2 2 2 1 FYVE zinc finger Zn-C2H2_12 PF18112.1 ORF5315 - 0.002 18.6 14.4 0.19 12.2 3.4 3.3 2 2 0 2 2 2 2 Autophagy receptor zinc finger-C2H2 domain Prok-RING_1 PF14446.6 ORF5315 - 0.0033 17.3 1.4 1.8 8.6 0.2 2.2 2 0 0 2 2 2 2 Prokaryotic RING finger family 1 zinc_ribbon_9 PF14369.6 ORF5315 - 0.0037 17.5 1.8 2 8.7 0.3 2.5 2 0 0 2 2 2 2 zinc-ribbon zf-FPG_IleRS PF06827.14 ORF5315 - 0.0043 16.9 0.6 0.33 10.9 0.0 2.5 2 0 0 2 2 2 1 Zinc finger found in FPG and IleRS zf-met PF12874.7 ORF5315 - 0.0058 17.0 2.3 0.67 10.4 0.1 2.4 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_9 PF16293.5 ORF5315 - 0.0062 16.4 1.3 0.38 10.6 0.1 2.2 2 0 0 2 2 2 1 C2H2 type zinc-finger (1 copy) zf_UBZ PF18439.1 ORF5315 - 0.0076 15.8 2.4 0.52 9.9 0.1 2.4 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger zf_ZIC PF18366.1 ORF5315 - 0.0083 16.2 3.3 0.053 13.6 0.2 2.3 2 0 0 2 2 2 1 Zic proteins zinc finger domain zf-H2C2_2 PF13465.6 ORF5315 - 0.0089 16.4 7.3 0.66 10.5 0.8 2.9 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_6 PF13912.6 ORF5315 - 0.016 15.2 1.4 3.5 7.7 0.2 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger RNF220 PF15926.5 ORF5315 - 0.017 14.7 1.1 0.16 11.5 0.2 2.0 2 0 0 2 2 2 0 E3 ubiquitin-protein ligase RNF220 zf-C2H2_3 PF13878.6 ORF5315 - 0.019 14.8 1.2 0.25 11.2 0.1 2.3 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-C2H2_jaz PF12171.8 ORF5315 - 0.027 14.8 2.6 2.4 8.5 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding Prok-RING_4 PF14447.6 ORF5315 - 0.027 14.3 1.1 1.7 8.6 0.2 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF5315 - 0.028 14.3 1.4 3.9 7.4 0.3 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C2H2_2 PF12756.7 ORF5315 - 0.037 14.3 0.4 7.6 6.9 0.0 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger (2 copies) PHF5 PF03660.14 ORF5315 - 0.072 13.3 0.5 11 6.3 0.1 2.2 2 0 0 2 2 2 0 PHF5-like protein UBZ_FAAP20 PF15750.5 ORF5315 - 0.081 12.9 0.8 5.5 7.0 0.1 2.5 2 0 0 2 2 2 0 Ubiquitin-binding zinc-finger ADK_lid PF05191.14 ORF5315 - 0.2 11.7 1.7 0.47 10.5 1.6 1.8 1 1 0 1 1 1 0 Adenylate kinase, active site lid CTU2 PF10288.9 ORF5315 - 0.22 11.8 1.2 3.4 7.9 0.1 2.1 1 1 1 2 2 2 0 Cytoplasmic tRNA 2-thiolation protein 2 FOXP-CC PF16159.5 ORF5315 - 0.29 11.8 1.4 13 6.5 0.1 2.3 2 0 0 2 2 2 0 FOXP coiled-coil domain Actin_micro PF17003.5 ORF5315 - 0.39 9.9 2.6 0.66 9.1 0.3 1.9 1 1 1 2 2 2 0 Putative actin-like family zf-TFIIB PF13453.6 ORF5315 - 0.47 9.8 4.4 7.4 6.0 0.1 2.6 3 0 0 3 3 3 0 Transcription factor zinc-finger DUF2225 PF09986.9 ORF5315 - 0.49 10.1 2.2 11 5.6 0.4 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) Whib PF02467.16 ORF51769 - 0.12 13.0 7.0 0.54 10.9 3.6 2.4 2 1 0 2 2 2 0 Transcription factor WhiB Glyco_transf_22 PF03901.17 ORF50895 - 0.16 11.1 0.1 0.17 11.1 0.1 1.1 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family DIOX_N PF14226.6 ORF49151 - 0.086 13.6 0.1 0.17 12.7 0.1 1.5 1 1 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal ELM2 PF01448.24 ORF48277 - 2.4e-09 37.8 0.5 0.00038 21.2 0.0 2.7 3 0 0 3 3 3 2 ELM2 domain Nucleoporin_C PF03177.14 ORF47962 - 0.31 9.7 0.9 1.1 8.0 0.0 1.8 2 0 0 2 2 2 0 Non-repetitive/WGA-negative nucleoporin C-terminal E3_UFM1_ligase PF09743.9 ORF47959 - 0.023 14.3 0.2 0.026 14.1 0.2 1.1 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 HU-CCDC81_bac_2 PF18175.1 ORF45906 - 0.0017 18.2 3.0 0.003 17.4 3.0 1.5 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 DUF1741 PF08427.10 ORF45906 - 0.028 14.1 3.5 0.025 14.3 2.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1741) Bac_DNA_binding PF00216.21 ORF45906 - 0.087 13.0 0.1 0.17 12.1 0.1 1.4 1 0 0 1 1 1 0 Bacterial DNA-binding protein DDE_Tnp_IS66_C PF13817.6 ORF44367 - 0.021 15.1 0.0 0.038 14.2 0.0 1.4 1 0 0 1 1 1 0 IS66 C-terminal element DHHC PF01529.20 ORF44367 - 5.2 7.2 8.3 7.3 6.7 8.3 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Herpes_LMP1 PF05297.11 ORF44367 - 7.6 5.6 7.6 9.3 5.3 7.6 1.3 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) SIT PF15330.6 ORF44367 - 7.9 7.0 6.2 0.84 10.1 0.2 2.4 3 0 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT NTF2 PF02136.20 ORF43709 - 7.2e-26 91.1 0.0 8.1e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_2 PF12680.7 ORF43709 - 0.016 15.8 0.0 0.02 15.5 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain DUF4440 PF14534.6 ORF43709 - 0.15 12.4 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) CobS_N PF12556.8 ORF43252 - 0.16 11.7 0.1 0.25 11.1 0.1 1.3 1 0 0 1 1 1 0 Cobaltochelatase CobS subunit N terminal ART PF01129.18 ORF42344 - 1.1e-07 31.4 0.0 1.3e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 ORF42344 - 0.00045 19.6 0.0 0.0005 19.5 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosyltransferase exoenzyme Osmo_MPGsynth PF09488.10 ORF41623 - 0.015 14.0 0.1 0.019 13.7 0.1 1.1 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) SBE2 PF17076.5 ORF41623 - 0.17 10.1 0.1 0.17 10.1 0.1 1.0 1 0 0 1 1 1 0 SBE2, cell-wall formation Pkr1 PF08636.10 ORF41365 - 0.0051 16.9 0.3 0.0051 16.9 0.3 2.1 2 0 0 2 2 2 1 ER protein Pkr1 DUF805 PF05656.14 ORF4019 - 3.3e-35 120.6 3.1 3.8e-35 120.5 3.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF805) DUF3099 PF11298.8 ORF4019 - 0.82 9.9 2.9 0.49 10.6 0.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3099) Whib PF02467.16 ORF40172 - 0.12 13.0 7.0 0.54 10.9 3.6 2.4 2 1 0 2 2 2 0 Transcription factor WhiB ExoD PF06055.12 ORF39490 - 0.16 11.4 0.1 0.34 10.2 0.0 1.5 1 1 1 2 2 2 0 Exopolysaccharide synthesis, ExoD Autophagy_C PF10381.9 ORF39475 - 2.4 7.7 7.6 0.84 9.2 1.9 2.4 2 0 0 2 2 2 0 Autophagocytosis associated protein C-terminal DUF2457 PF10446.9 ORF38012 - 0.034 13.3 1.6 0.037 13.2 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) zf-C3HC4_3 PF13920.6 ORF3778 - 0.043 13.7 1.4 0.081 12.8 1.4 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) AGTRAP PF06396.11 ORF35639 - 0.097 12.5 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) MORN PF02493.20 ORF35590 - 1.9e-11 43.1 9.9 0.00043 20.0 0.0 4.0 5 0 0 5 5 5 3 MORN repeat DUF3048_C PF17479.2 ORF35590 - 0.041 14.3 1.1 2.8 8.4 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain FAM47 PF14642.6 ORF35326 - 0.036 13.6 0.1 0.046 13.3 0.1 1.1 1 0 0 1 1 1 0 FAM47 family WIYLD PF10440.9 ORF33923 - 0.093 12.5 0.1 0.21 11.4 0.0 1.6 2 0 0 2 2 2 0 Ubiquitin-binding WIYLD domain TP_methylase PF00590.20 ORF33923 - 0.11 12.4 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetrapyrrole (Corrin/Porphyrin) Methylases HMw1_D2 PF18254.1 ORF3388 - 0.022 15.1 0.0 0.04 14.3 0.0 1.4 1 0 0 1 1 1 0 HMW1 domain 2 Pneumo_ncap PF03246.13 ORF3388 - 0.03 13.1 0.0 0.039 12.7 0.0 1.2 1 0 0 1 1 1 0 Pneumovirus nucleocapsid protein CWC25 PF12542.8 ORF3388 - 0.036 14.9 0.1 0.065 14.1 0.1 1.4 1 0 0 1 1 1 0 Pre-mRNA splicing factor DHODB_Fe-S_bind PF10418.9 ORF3278 - 0.098 12.5 4.0 0.17 11.7 4.0 1.3 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Stc1 PF12898.7 ORF31984 - 0.001 19.6 1.2 0.11 13.1 1.2 2.3 1 1 0 1 1 1 1 Stc1 domain Cytochrom_B_N_2 PF13631.6 ORF31984 - 0.14 12.1 0.9 0.31 11.0 0.9 1.6 1 1 0 1 1 1 0 Cytochrome b(N-terminal)/b6/petB Thaumatin PF00314.17 ORF31056 - 0.028 14.0 0.7 0.034 13.8 0.7 1.1 1 0 0 1 1 1 0 Thaumatin family DUF3328 PF11807.8 ORF31056 - 0.084 12.6 0.1 0.1 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) DUF1364 PF07102.12 ORF3082 - 0.013 15.4 0.4 0.019 14.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) CarbpepA_inh PF02977.15 ORF3082 - 0.18 11.6 1.7 0.2 11.4 0.3 1.8 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor Neuromodulin PF06614.11 ORF30234 - 0.057 13.6 0.1 0.069 13.3 0.1 1.1 1 0 0 1 1 1 0 Neuromodulin Whib PF02467.16 ORF28484 - 0.12 13.0 7.0 0.54 10.9 3.6 2.4 2 1 0 2 2 2 0 Transcription factor WhiB DUF5409 PF17421.2 ORF28469 - 8.1 7.2 6.0 2.5 8.9 0.9 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5409) XPG_N PF00752.17 ORF2755 - 0.1 13.1 0.9 0.74 10.3 0.5 1.9 1 1 1 2 2 2 0 XPG N-terminal domain 2TM PF13239.6 ORF27496 - 0.18 12.1 1.3 0.26 11.6 1.3 1.4 1 0 0 1 1 1 0 2TM domain Stc1 PF12898.7 ORF26077 - 0.0012 19.4 0.6 0.0018 18.8 0.6 1.3 1 0 0 1 1 1 1 Stc1 domain Zn_Tnp_IS1595 PF12760.7 ORF26077 - 0.048 13.6 1.0 0.087 12.8 1.0 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf_C2H2_13 PF18508.1 ORF26077 - 3.2 7.4 5.4 3.2 7.4 0.2 3.0 4 0 0 4 4 4 0 Zinc finger domain zf-C3HC4_3 PF13920.6 ORF25652 - 0.047 13.5 1.4 0.081 12.8 1.4 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) PDZ PF00595.24 ORF22675 - 5.4e-07 29.9 0.0 6.9e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF22675 - 0.00024 20.9 0.0 0.00037 20.3 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 ORF22675 - 0.0096 16.2 0.0 0.012 15.9 0.0 1.2 1 0 0 1 1 1 1 PDZ domain SNN_linker PF09050.10 ORF22675 - 0.29 10.9 3.0 0.53 10.1 3.0 1.4 1 0 0 1 1 1 0 Stannin unstructured linker NARG2_C PF10505.9 ORF2248 - 0.00067 19.2 0.9 0.00082 18.9 0.9 1.1 1 0 0 1 1 1 1 NMDA receptor-regulated gene protein 2 C-terminus DUF4173 PF13777.6 ORF2248 - 0.012 15.1 0.5 0.014 14.9 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) Sorting_nexin PF03700.13 ORF21752 - 0.32 11.5 8.7 4.6 7.8 8.6 2.0 1 1 0 1 1 1 0 Sorting nexin, N-terminal domain DNA_pol_phi PF04931.13 ORF21752 - 1.5 6.8 8.2 1.4 6.9 8.2 1.0 1 0 0 1 1 1 0 DNA polymerase phi DUF63 PF01889.17 ORF21445 - 0.099 12.8 0.0 0.1 12.7 0.0 1.0 1 0 0 1 1 1 0 Membrane protein of unknown function DUF63 HCO3_cotransp PF00955.21 ORF21124 - 3.5e-10 39.4 0.0 4.5e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 HCO3- transporter family zf-LITAF-like PF10601.9 ORF20449 - 2.7e-15 56.4 17.6 3.7e-15 55.9 17.6 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain PXPV PF12778.7 ORF20449 - 0.061 13.2 9.2 0.061 13.2 9.2 2.2 2 1 0 2 2 2 0 PXPV repeat (3 copies) DUF2555 PF10742.9 ORF18584 - 0.074 12.9 0.1 1.2 9.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2555) FcoT PF10862.8 ORF18584 - 0.18 11.4 1.5 1.3 8.6 0.3 2.0 1 1 1 2 2 2 0 FcoT-like thioesterase domain INCENP_N PF12178.8 ORF18584 - 0.26 11.3 0.6 1.1 9.3 0.2 2.1 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal DUF1364 PF07102.12 ORF17859 - 0.013 15.4 0.4 0.019 14.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) CarbpepA_inh PF02977.15 ORF17859 - 0.18 11.6 1.7 0.2 11.4 0.3 1.8 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor Ribosomal_L12 PF00542.19 ORF152295 - 6.4e-31 106.5 8.6 6.4e-31 106.5 8.6 1.6 2 1 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 ORF152295 - 1.2e-16 60.1 10.9 1.2e-16 60.1 10.9 3.5 2 1 2 4 4 4 1 Ribosomal protein L7/L12 dimerisation domain NARG2_C PF10505.9 ORF151817 - 0.00067 19.2 0.9 0.00082 18.9 0.9 1.1 1 0 0 1 1 1 1 NMDA receptor-regulated gene protein 2 C-terminus DUF4173 PF13777.6 ORF151817 - 0.012 15.1 0.5 0.014 14.9 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) PH PF00169.29 ORF151459 - 0.085 13.4 0.0 0.099 13.2 0.0 1.2 1 0 0 1 1 1 0 PH domain ELMO_CED12 PF04727.13 ORF151008 - 0.12 12.5 0.2 0.13 12.3 0.2 1.2 1 0 0 1 1 1 0 ELMO/CED-12 family Sugar_tr PF00083.24 ORF150418 - 1.5e-12 47.2 15.7 1.6e-12 47.1 15.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter PufQ PF05398.11 ORF150418 - 0.12 12.6 0.8 4.1 7.6 0.5 2.2 2 0 0 2 2 2 0 PufQ cytochrome subunit DUF4330 PF14221.6 ORF150418 - 1.3 9.2 6.1 2.6 8.2 4.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4330) TssN PF17555.2 ORF150418 - 2.8 7.3 11.2 3.3 7.0 11.2 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN TAL_FSA PF00923.19 ORF148262 - 3.5e-18 65.9 0.8 5.9e-18 65.2 0.8 1.3 1 1 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase zf-C3HC4_3 PF13920.6 ORF148062 - 0.047 13.5 1.4 0.081 12.8 1.4 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Perm-CXXC PF15629.6 ORF147842 - 0.15 12.4 4.5 2.5 8.4 0.6 2.4 2 0 0 2 2 2 0 Permuted single zf-CXXC unit DIOX_N PF14226.6 ORF147178 - 0.086 13.6 0.1 0.17 12.7 0.1 1.5 1 1 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal LSDAT_euk PF18139.1 ORF145559 - 0.00013 21.4 2.3 0.00015 21.3 1.9 1.3 1 1 0 1 1 1 1 SLOG in TRPM TPH PF13868.6 ORF145559 - 0.0029 16.2 36.7 0.053 12.0 17.8 2.0 2 0 0 2 2 2 2 Trichohyalin-plectin-homology domain DUF2229 PF09989.9 ORF145559 - 2.3 7.8 6.7 2.5 7.7 6.7 1.2 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) DUF5432 PF17497.2 ORF145056 - 0.0058 16.7 1.2 0.0058 16.7 1.2 2.6 1 1 1 2 2 2 1 Family of unknown function (DUF5432) DUF2070 PF09843.9 ORF145056 - 3.1 6.0 11.1 3.5 5.8 11.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) CCDC92 PF14916.6 ORF14489 - 0.00032 20.4 0.7 0.00074 19.2 0.7 1.6 1 0 0 1 1 1 1 Coiled-coil domain of unknown function TT_ORF1 PF02956.14 ORF14489 - 1.1 7.9 6.3 1.2 7.7 6.3 1.0 1 0 0 1 1 1 0 TT viral orf 1 CobS_N PF12556.8 ORF144042 - 0.16 11.7 0.1 0.25 11.1 0.1 1.3 1 0 0 1 1 1 0 Cobaltochelatase CobS subunit N terminal DUF2101 PF09874.9 ORF143942 - 0.03 14.0 2.8 0.036 13.8 2.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) EF-hand_1 PF00036.32 ORF143650 - 1.2e-06 27.7 0.0 0.024 14.2 0.0 3.2 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF143650 - 1.4e-05 25.4 0.2 0.26 11.8 0.0 2.4 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF143650 - 3.2e-05 23.5 0.1 0.3 11.1 0.0 3.0 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF143650 - 0.013 15.3 0.0 0.15 11.9 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain pair EF-hand_9 PF14658.6 ORF143650 - 0.041 14.2 0.0 0.086 13.2 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain PH PF00169.29 ORF142713 - 3.2e-17 63.0 0.3 3.6e-17 62.8 0.3 1.1 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF142713 - 0.00084 19.7 1.1 0.0074 16.7 1.1 2.0 1 1 0 1 1 1 1 Pleckstrin homology domain PH_3 PF14593.6 ORF142713 - 0.0011 19.1 0.1 0.0024 18.0 0.1 1.5 1 1 0 1 1 1 1 PH domain PH_13 PF16652.5 ORF142713 - 0.0012 18.6 0.0 0.0014 18.4 0.0 1.1 1 0 0 1 1 1 1 Pleckstrin homology domain PH_4 PF15404.6 ORF142713 - 0.006 16.4 0.2 2.8 7.7 0.0 2.2 1 1 1 2 2 2 2 Pleckstrin homology domain PH_9 PF15410.6 ORF142713 - 0.0069 16.8 0.1 0.024 15.0 0.1 1.7 1 1 0 1 1 1 1 Pleckstrin homology domain NARG2_C PF10505.9 ORF141830 - 0.00067 19.2 0.9 0.00082 18.9 0.9 1.1 1 0 0 1 1 1 1 NMDA receptor-regulated gene protein 2 C-terminus DUF4173 PF13777.6 ORF141830 - 0.012 15.1 0.5 0.014 14.9 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) AP3D1 PF06375.11 ORF139155 - 0.54 10.5 9.2 0.66 10.2 9.2 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Clathrin_bdg PF15045.6 ORF137313 - 0.037 14.0 0.1 0.4 10.7 0.1 2.1 1 1 1 2 2 2 0 Clathrin-binding box of Aftiphilin, vesicle trafficking MMADHC PF10229.9 ORF137313 - 0.065 13.0 0.0 0.067 12.9 0.0 1.2 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein NTF2 PF02136.20 ORF136943 - 7.2e-26 91.1 0.0 8.1e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain SnoaL_2 PF12680.7 ORF136943 - 0.016 15.9 0.0 0.02 15.5 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain DUF4440 PF14534.6 ORF136943 - 0.17 12.3 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) DUF1216 PF06746.11 ORF135472 - 0.0013 18.8 1.6 0.0016 18.5 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1216) Mem_trans PF03547.18 ORF135472 - 0.15 10.4 0.4 0.18 10.2 0.4 1.0 1 0 0 1 1 1 0 Membrane transport protein NUC202 PF08166.12 ORF131937 - 0.0036 17.3 4.6 0.17 11.9 0.3 2.3 2 0 0 2 2 2 2 NUC202 domain PknG_rubred PF16919.5 ORF131851 - 0.097 12.8 0.7 0.097 12.8 0.7 2.1 1 1 1 2 2 2 0 Protein kinase G rubredoxin domain C1_2 PF03107.16 ORF131851 - 0.16 12.3 8.6 5 7.5 4.7 2.9 2 1 0 2 2 2 0 C1 domain Ras PF00071.22 ORF13115 - 2.1e-26 92.5 0.4 2.4e-26 92.3 0.4 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF13115 - 1.7e-06 28.2 0.6 4.9e-06 26.8 0.1 1.8 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF13115 - 0.00067 19.1 0.1 0.00083 18.9 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SNF2_N PF00176.23 ORF13115 - 0.017 13.9 0.0 0.018 13.8 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain RsgA_GTPase PF03193.16 ORF13115 - 0.018 14.9 0.1 0.023 14.6 0.1 1.1 1 0 0 1 1 1 0 RsgA GTPase Ser_hydrolase PF06821.13 ORF13115 - 0.12 12.2 0.1 0.23 11.3 0.1 1.5 1 1 0 1 1 1 0 Serine hydrolase DivIC PF04977.15 ORF130845 - 0.1 12.4 2.7 0.25 11.1 0.1 2.2 2 0 0 2 2 2 0 Septum formation initiator ROQ_II PF18386.1 ORF130693 - 0.026 14.3 2.5 0.039 13.8 0.1 2.3 3 0 0 3 3 3 0 Roquin II domain NADH_dehy_S2_C PF06444.11 ORF130176 - 1.2 9.7 7.9 0.81 10.2 1.2 2.9 2 1 1 3 3 3 0 NADH dehydrogenase subunit 2 C-terminus LMP PF04778.12 ORF129450 - 0.053 13.4 0.5 0.079 12.9 0.4 1.4 1 1 0 1 1 1 0 LMP repeated region FtsL PF04999.13 ORF129120 - 1.6e-35 121.0 0.1 1.9e-35 120.7 0.1 1.1 1 0 0 1 1 1 1 Cell division protein FtsL DivIC PF04977.15 ORF129120 - 0.0093 15.7 0.1 0.012 15.3 0.1 1.1 1 0 0 1 1 1 1 Septum formation initiator Neur_chan_memb PF02932.16 ORF12888 - 2.3 8.2 5.9 2.8 8.0 5.9 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region FAM76 PF16046.5 ORF12888 - 4.2 6.6 14.0 4.9 6.4 14.0 1.1 1 0 0 1 1 1 0 FAM76 protein Myc_target_1 PF15179.6 ORF12888 - 6.9 6.5 10.8 8 6.3 10.8 1.1 1 0 0 1 1 1 0 Myc target protein 1 MHC2-interact PF09307.10 ORF128701 - 0.39 10.7 2.4 0.21 11.6 0.4 1.7 2 0 0 2 2 2 0 CLIP, MHC2 interacting PNRC PF15365.6 ORF128439 - 0.019 14.8 3.0 0.056 13.3 3.0 1.9 1 0 0 1 1 1 0 Proline-rich nuclear receptor coactivator motif HupH_C PF04809.13 ORF128096 - 6.7e-32 109.7 0.0 7.5e-32 109.5 0.0 1.0 1 0 0 1 1 1 1 HupH hydrogenase expression protein, C-terminal conserved region DUF2555 PF10742.9 ORF127367 - 0.074 12.9 0.1 1.2 9.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2555) FcoT PF10862.8 ORF127367 - 0.18 11.4 1.5 1.3 8.6 0.3 2.0 1 1 1 2 2 2 0 FcoT-like thioesterase domain INCENP_N PF12178.8 ORF127367 - 0.26 11.3 0.6 1.1 9.3 0.2 2.1 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal Clathrin_bdg PF15045.6 ORF126886 - 0.037 14.0 0.1 0.4 10.7 0.1 2.1 1 1 1 2 2 2 0 Clathrin-binding box of Aftiphilin, vesicle trafficking MMADHC PF10229.9 ORF126886 - 0.065 13.0 0.0 0.067 12.9 0.0 1.2 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein DUF643 PF04867.12 ORF122861 - 0.031 14.9 4.3 0.037 14.7 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF643) CBFD_NFYB_HMF PF00808.23 ORF122509 - 2.7e-14 53.2 0.2 2.7e-14 53.2 0.2 1.7 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF122509 - 2.1e-07 31.4 0.7 2.4e-07 31.2 0.7 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 RXT2_N PF08595.11 ORF122509 - 0.017 15.1 1.3 0.022 14.8 1.3 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal CENP-X PF09415.10 ORF122509 - 0.066 13.5 1.3 0.076 13.3 0.1 1.7 2 0 0 2 2 2 0 CENP-S associating Centromere protein X Sir1 PF11603.8 ORF121103 - 0.073 13.6 1.5 0.09 13.3 1.5 1.1 1 0 0 1 1 1 0 Regulatory protein Sir1 DIOX_N PF14226.6 ORF120201 - 0.086 13.6 0.1 0.17 12.7 0.1 1.5 1 1 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal DUF4597 PF15366.6 ORF119318 - 0.066 13.0 0.3 0.12 12.2 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4597) AAA_12 PF13087.6 ORF119267 - 3.5e-06 26.8 0.0 5e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF4041 PF13250.6 ORF119267 - 0.11 12.3 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) Neuromodulin PF06614.11 ORF118146 - 0.057 13.6 0.1 0.069 13.3 0.1 1.1 1 0 0 1 1 1 0 Neuromodulin Cyt-b5 PF00173.28 ORF117436 - 3.3e-21 75.2 0.1 4.2e-21 74.9 0.1 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain GP44 PF17510.2 ORF117436 - 0.12 12.6 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Gene product 44 S4 PF01479.25 ORF116738 - 9.2e-08 31.7 0.0 1.4e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 S4 domain DUF3450 PF11932.8 ORF11656 - 0.0019 17.6 4.3 0.0023 17.3 4.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Phasin PF05597.11 ORF11656 - 0.093 12.7 5.8 0.28 11.2 5.8 1.8 1 1 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF948 PF06103.11 ORF11656 - 0.095 13.0 1.7 0.38 11.0 0.2 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Syntaxin-6_N PF09177.11 ORF11656 - 0.17 12.5 4.6 0.62 10.7 4.6 1.9 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Fib_alpha PF08702.10 ORF11656 - 1.2 9.3 8.5 2.3 8.4 8.5 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family ABC_tran_CTD PF16326.5 ORF11656 - 1.9 8.8 6.7 5.4 7.4 0.1 3.2 2 1 1 3 3 3 0 ABC transporter C-terminal domain Whib PF02467.16 ORF113076 - 0.12 13.0 7.0 0.54 10.9 3.6 2.4 2 1 0 2 2 2 0 Transcription factor WhiB DUF4281 PF14108.6 ORF112050 - 0.011 16.1 0.0 0.014 15.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4281) zf-AN1 PF01428.16 ORF111825 - 0.14 12.3 3.4 1.2 9.4 2.1 2.4 2 0 0 2 2 2 0 AN1-like Zinc finger DUF3744 PF12558.8 ORF110182 - 0.085 13.6 0.7 0.26 12.1 0.4 2.0 1 1 1 2 2 2 0 ATP-binding cassette cobalt transporter FANCI_HD1 PF14679.6 ORF109755 - 0.032 14.2 0.2 0.043 13.8 0.2 1.2 1 0 0 1 1 1 0 FANCI helical domain 1 DUF3005 PF11448.8 ORF109755 - 0.12 12.4 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3005) RecO_N_2 PF13114.6 ORF108566 - 0.021 14.5 0.1 0.04 13.6 0.1 1.4 1 0 0 1 1 1 0 RecO N terminal DUF2087 PF09860.9 ORF108306 - 0.045 13.9 0.0 0.079 13.1 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) OrfB_IS605 PF01385.19 ORF108306 - 0.19 11.9 3.9 0.12 12.6 1.9 1.7 1 1 1 2 2 2 0 Probable transposase zf-C3HC4_3 PF13920.6 ORF108297 - 0.047 13.5 1.4 0.081 12.8 1.4 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Mto2_bdg PF12808.7 ORF107837 - 0.037 14.3 3.1 5.2 7.5 0.2 2.7 2 0 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region SIKE PF05769.11 ORF107837 - 0.39 10.6 11.2 1.3 9.0 11.2 1.7 1 1 0 1 1 1 0 SIKE family YabA PF06156.13 ORF107837 - 9.4 6.9 8.6 1.8e+02 2.8 8.6 2.4 1 1 0 1 1 1 0 Initiation control protein YabA NnrS PF05940.12 ORF10700 - 0.052 12.9 0.2 0.054 12.9 0.2 1.1 1 0 0 1 1 1 0 NnrS protein Tctex-1 PF03645.13 ORF106796 - 5.6e-25 87.6 3.6 6.5e-25 87.4 3.6 1.1 1 0 0 1 1 1 1 Tctex-1 family Pkip-1 PF06878.11 ORF106796 - 0.08 13.0 1.4 0.097 12.8 1.4 1.2 1 0 0 1 1 1 0 Pkip-1 protein zf-C3HC4_3 PF13920.6 ORF106762 - 0.047 13.5 1.4 0.081 12.8 1.4 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) CHCH PF06747.13 ORF105720 - 0.0041 17.2 5.5 0.0071 16.4 5.5 1.4 1 0 0 1 1 1 1 CHCH domain NDUF_B7 PF05676.13 ORF105720 - 0.0052 16.5 2.1 0.012 15.3 2.1 1.6 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Pet191_N PF10203.9 ORF105720 - 0.0061 16.8 4.5 0.013 15.8 4.5 1.6 1 1 0 1 1 1 1 Cytochrome c oxidase assembly protein PET191 MTCP1 PF08991.10 ORF105720 - 0.15 12.3 3.0 0.26 11.5 3.0 1.5 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type EPF PF17181.4 ORF104695 - 0.0027 17.7 2.2 0.0053 16.7 2.2 1.4 1 0 0 1 1 1 1 Epidermal patterning factor proteins Proteasome_A_N PF10584.9 ORF104588 - 0.26 11.0 0.2 0.61 9.8 0.2 1.6 1 0 0 1 1 1 0 Proteasome subunit A N-terminal signature DHHC PF01529.20 ORF103524 - 1.6 8.9 8.6 2.4 8.3 8.6 1.3 1 1 0 1 1 1 0 DHHC palmitoyltransferase MFS_4 PF06779.14 ORF103483 - 3.7e-19 69.3 5.9 4.2e-19 69.1 5.9 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB Asp-Al_Ex PF06826.12 ORF103483 - 0.0016 18.3 3.8 0.0017 18.2 3.8 1.0 1 0 0 1 1 1 1 Predicted Permease Membrane Region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks218.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks218.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks218.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks218.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Clathrin_bdg PF15045.6 ORF100786 - 0.037 14.0 0.1 0.4 10.7 0.1 2.1 1 1 1 2 2 2 0 Clathrin-binding box of Aftiphilin, vesicle trafficking MMADHC PF10229.9 ORF100786 - 0.065 13.0 0.0 0.067 12.9 0.0 1.2 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein Gar1 PF04410.14 ORF100118 - 0.016 15.0 1.0 0.037 13.8 1.0 1.7 1 1 0 1 1 1 0 Gar1/Naf1 RNA binding region Stealth_CR2 PF11380.8 ORF100118 - 0.079 13.1 0.2 0.1 12.7 0.2 1.3 1 0 0 1 1 1 0 Stealth protein CR2, conserved region 2 DPM2 PF07297.12 NODE_50978_length_358_cov_1.715170_g43072_i0forward_frame_1 - 0.06 13.6 0.2 0.06 13.6 0.2 1.6 2 0 0 2 2 2 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) DUF1736 PF08409.11 NODE_50971_length_358_cov_2.086687_g43065_i0reverse_frame_1 - 8.8 6.4 8.7 2.5 8.1 2.9 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF1736) Tissue_fac PF01108.17 NODE_50969_length_358_cov_2.133127_g43063_i0reverse_frame_1 - 0.058 13.2 0.1 0.079 12.8 0.1 1.2 1 0 0 1 1 1 0 Tissue factor ORC5_C PF14630.6 NODE_50969_length_358_cov_2.133127_g43063_i0forward_frame_1 - 0.021 14.4 0.0 0.024 14.1 0.0 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus PCNA_C PF02747.15 NODE_50967_length_358_cov_2.170279_g43061_i0reverse_frame_1 - 1.4e-09 38.2 0.4 2e-09 37.7 0.4 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain Leader_Erm PF08253.11 NODE_50967_length_358_cov_2.170279_g43061_i0forward_frame_1 - 0.2 11.9 0.4 0.2 11.9 0.4 2.3 3 0 0 3 3 3 0 Erm Leader peptide Fer4_5 PF12801.7 NODE_50962_length_358_cov_2.430341_g43056_i0reverse_frame_1 - 2.3e-15 56.3 0.5 2.3e-15 56.3 0.5 1.7 2 0 0 2 2 2 1 4Fe-4S binding domain YrhC PF14143.6 NODE_50962_length_358_cov_2.430341_g43056_i0reverse_frame_1 - 0.51 10.5 4.6 0.44 10.7 0.7 2.2 2 0 0 2 2 2 0 YrhC-like protein Helicase_C PF00271.31 NODE_50956_length_358_cov_3.226006_g43050_i0forward_frame_1 - 2.8e-10 40.5 0.3 4.2e-10 40.0 0.3 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 NODE_50956_length_358_cov_3.226006_g43050_i0forward_frame_1 - 0.11 11.6 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase DUF4939 PF16297.5 NODE_50955_length_358_cov_3.281734_g43049_i0reverse_frame_1 - 0.13 12.2 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4939) Peptidase_M24 PF00557.24 NODE_50952_length_358_cov_4.123839_g43046_i0reverse_frame_1 - 1.7e-11 44.2 0.0 2e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF3793 PF12672.7 NODE_50952_length_358_cov_4.123839_g43046_i0reverse_frame_1 - 0.0016 18.6 0.0 0.0019 18.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3793) Tmemb_161AB PF10268.9 NODE_50946_length_358_cov_47.356037_g43040_i0forward_frame_1 - 0.037 12.7 4.7 0.037 12.7 4.7 1.1 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB CHASE9 PF17153.4 NODE_50941_length_358_cov_65.439628_g43035_i0reverse_frame_1 - 0.093 12.9 0.2 0.18 12.0 0.1 1.5 1 1 1 2 2 2 0 Periplasmic sensor domain, extracellular p450 PF00067.22 NODE_50940_length_358_cov_75.876161_g43034_i0reverse_frame_1 - 1.7e-14 53.5 0.3 1.9e-14 53.3 0.3 1.0 1 0 0 1 1 1 1 Cytochrome P450 Amastin PF07344.11 NODE_50936_length_358_cov_92.201238_g43030_i0reverse_frame_1 - 0.19 11.6 0.9 0.21 11.4 0.2 1.4 2 0 0 2 2 2 0 Amastin surface glycoprotein DUF5540 PF17694.1 NODE_50936_length_358_cov_92.201238_g43030_i0forward_frame_1 - 0.073 13.6 0.1 0.12 12.9 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5540) Myb_DNA-bind_5 PF13873.6 NODE_50925_length_358_cov_176.012384_g43019_i0forward_frame_1 - 0.18 11.9 0.0 0.29 11.2 0.0 1.3 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain S-antigen PF05756.11 NODE_50922_length_358_cov_207.256966_g43016_i0forward_frame_1 - 2.4 8.6 4.4 1.6 9.2 2.6 1.7 2 0 0 2 2 2 0 S-antigen protein DUF4118 PF13493.6 NODE_50919_length_358_cov_245.606811_g43013_i0reverse_frame_1 - 0.014 15.1 0.3 0.03 14.1 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) Xylo_C PF12529.8 NODE_50918_length_358_cov_277.294118_g43012_i0reverse_frame_1 - 0.092 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Xylosyltransferase C terminal Mif2_N PF15624.6 NODE_50918_length_358_cov_277.294118_g43012_i0forward_frame_1 - 0.25 12.1 1.1 0.28 11.9 1.1 1.2 1 0 0 1 1 1 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal Hamartin PF04388.12 NODE_50918_length_358_cov_277.294118_g43012_i0forward_frame_1 - 0.3 9.7 2.8 0.34 9.5 2.8 1.0 1 0 0 1 1 1 0 Hamartin protein MORN PF02493.20 NODE_50913_length_358_cov_541.105263_g43008_i0forward_frame_1 - 0.21 11.6 0.4 2.1 8.4 0.0 2.1 2 0 0 2 2 2 0 MORN repeat TFB6 PF17110.5 NODE_50912_length_358_cov_629.941176_g43007_i0forward_frame_1 - 0.041 13.6 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH Peptidase_M14 PF00246.24 NODE_50904_length_359_cov_1.549383_g42999_i0reverse_frame_1 - 1.8e-09 37.8 0.0 1.9e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Zinc carboxypeptidase Suf PF05843.14 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 0.41 10.6 12.8 0.43 10.5 12.8 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) Neur_chan_memb PF02932.16 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 0.9 9.6 4.5 0.82 9.7 4.5 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4834 PF16118.5 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 1.5 9.9 11.3 2 9.4 11.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) CIAPIN1 PF05093.13 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 1.6 9.3 8.0 2.8 8.5 8.0 1.4 1 0 0 1 1 1 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis Presenilin PF01080.17 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 3.7 6.2 11.5 3.9 6.1 11.5 1.0 1 0 0 1 1 1 0 Presenilin Pex14_N PF04695.13 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 6.8 7.3 17.6 8 7.1 17.6 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3464 PF11947.8 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_1 - 7 6.4 10.7 8.4 6.1 10.7 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 NUC205 PF08168.11 NODE_50895_length_359_cov_1.839506_g42990_i0reverse_frame_1 - 0.045 13.3 3.7 1.4 8.5 0.1 3.0 2 1 1 3 3 3 0 NUC205 domain MASE3 PF17159.4 NODE_50894_length_359_cov_1.904321_g42989_i0reverse_frame_1 - 0.017 14.8 4.9 0.023 14.4 4.9 1.2 1 0 0 1 1 1 0 Membrane-associated sensor domain MTHFR_C PF12225.8 NODE_50889_length_359_cov_2.120370_g42984_i0forward_frame_1 - 0.1 12.3 8.6 9.2 6.0 7.8 2.1 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal MFS_1 PF07690.16 NODE_50882_length_359_cov_2.416667_g42977_i0forward_frame_1 - 4.2e-18 65.4 10.8 4.7e-18 65.2 10.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_50882_length_359_cov_2.416667_g42977_i0forward_frame_1 - 3.4e-10 39.4 1.0 3.6e-10 39.3 1.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.6 NODE_50882_length_359_cov_2.416667_g42977_i0forward_frame_1 - 0.0001 21.0 3.1 0.00011 20.9 3.1 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein TRI12 PF06609.13 NODE_50882_length_359_cov_2.416667_g42977_i0forward_frame_1 - 0.019 13.4 0.2 0.019 13.4 0.2 1.0 1 0 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) DUF417 PF04224.12 NODE_50880_length_359_cov_2.589506_g42975_i0forward_frame_1 - 0.2 11.2 0.0 0.28 10.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF417 CsrA PF02599.16 NODE_50878_length_359_cov_2.932099_g42973_i0reverse_frame_1 - 0.014 15.3 0.5 0.025 14.5 0.5 1.4 1 0 0 1 1 1 0 Global regulator protein family Apis_Csd PF11671.8 NODE_50871_length_359_cov_4.024691_g42966_i0reverse_frame_1 - 0.039 14.0 1.3 0.049 13.6 1.3 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein OAD_gamma PF04277.13 NODE_50868_length_359_cov_13.206790_g42963_i0reverse_frame_1 - 0.017 15.7 0.5 0.028 15.0 0.5 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain PDDEXK_3 PF13366.6 NODE_50865_length_359_cov_44.225309_g42960_i0reverse_frame_1 - 0.011 16.0 1.4 0.016 15.5 1.4 1.4 1 1 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Mak16 PF04874.14 NODE_50865_length_359_cov_44.225309_g42960_i0reverse_frame_1 - 0.047 14.3 0.9 0.062 13.9 0.9 1.4 1 1 0 1 1 1 0 Mak16 protein C-terminal region DUF1385 PF07136.11 NODE_50864_length_359_cov_48.407407_g42959_i0forward_frame_1 - 3.2 7.0 7.9 2.3 7.5 7.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1385) zf-RING-like PF08746.11 NODE_50855_length_359_cov_69.570988_g42950_i0forward_frame_1 - 0.074 13.4 0.5 0.12 12.7 0.5 1.3 1 0 0 1 1 1 0 RING-like domain Orthopox_A36R PF05950.11 NODE_50852_length_359_cov_78.287037_g42947_i0reverse_frame_1 - 0.031 14.4 0.6 0.041 14.0 0.6 1.2 1 0 0 1 1 1 0 Orthopoxvirus A36R protein AgrB PF04647.15 NODE_50839_length_359_cov_120.851852_g42934_i0forward_frame_1 - 0.16 11.3 0.2 0.19 11.0 0.2 1.1 1 0 0 1 1 1 0 Accessory gene regulator B DUF1682 PF07946.14 NODE_50830_length_359_cov_793.984568_g42925_i0reverse_frame_1 - 0.25 10.5 9.6 0.27 10.4 9.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Connexin PF00029.19 NODE_50830_length_359_cov_793.984568_g42925_i0reverse_frame_1 - 3.3 7.4 5.7 4.5 7.0 5.6 1.3 1 1 0 1 1 1 0 Connexin EamA PF00892.20 NODE_50822_length_360_cov_1.735385_g42917_i0reverse_frame_1 - 1.3e-08 35.1 3.8 1.3e-08 35.1 3.8 2.0 2 0 0 2 2 2 1 EamA-like transporter family PUNUT PF16913.5 NODE_50822_length_360_cov_1.735385_g42917_i0reverse_frame_1 - 0.0026 17.0 1.9 0.0033 16.7 1.9 1.1 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport DUF1430 PF07242.11 NODE_50822_length_360_cov_1.735385_g42917_i0reverse_frame_1 - 0.0032 17.7 2.0 0.0032 17.7 2.0 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF1430) DUF1011 PF06237.12 NODE_50822_length_360_cov_1.735385_g42917_i0reverse_frame_1 - 0.2 12.0 3.7 0.11 12.9 1.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1011) COX2-transmemb PF09125.10 NODE_50819_length_360_cov_1.956923_g42914_i0forward_frame_1 - 0.064 13.1 0.6 0.12 12.1 0.1 1.8 2 0 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane He_PIG PF05345.12 NODE_50818_length_360_cov_1.956923_g42913_i0forward_frame_1 - 0.0015 18.7 1.4 0.022 14.9 0.3 2.7 2 1 0 2 2 2 1 Putative Ig domain Big_3_5 PF16640.5 NODE_50818_length_360_cov_1.956923_g42913_i0forward_frame_1 - 0.086 13.0 5.1 0.04 14.1 2.3 1.8 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 3) DRMBL PF07522.14 NODE_50814_length_360_cov_2.246154_g42909_i0reverse_frame_1 - 3.1 8.0 4.8 17 5.6 1.1 2.3 2 0 0 2 2 2 0 DNA repair metallo-beta-lactamase Arylsulfotran_2 PF14269.6 NODE_50813_length_360_cov_2.261538_g42908_i0forward_frame_1 - 0.14 11.5 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Arylsulfotransferase (ASST) zf_PR_Knuckle PF18445.1 NODE_50810_length_360_cov_3.052308_g42905_i0reverse_frame_1 - 0.044 13.6 0.1 0.082 12.7 0.1 1.4 1 0 0 1 1 1 0 PR zinc knuckle motif zf-SAP30 PF13866.6 NODE_50808_length_360_cov_3.240000_g42903_i0reverse_frame_1 - 1.9 8.7 6.6 4.9 7.3 0.3 2.3 1 1 1 2 2 2 0 SAP30 zinc-finger Tagatose_6_P_K PF08013.11 NODE_50803_length_360_cov_3.535385_g42898_i0forward_frame_1 - 3.7e-52 177.4 0.2 4.1e-52 177.3 0.2 1.0 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase TRAP_beta PF05753.14 NODE_50794_length_360_cov_61.369231_g42889_i0forward_frame_1 - 0.16 11.3 0.0 0.21 11.0 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) DUF4766 PF15973.5 NODE_50780_length_360_cov_94.670769_g42875_i0reverse_frame_1 - 1.6 9.4 13.0 2.2 8.9 13.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4766) Ribosomal_L28e PF01778.17 NODE_50778_length_360_cov_108.683077_g42873_i0forward_frame_1 - 1.1e-05 26.1 1.6 1.1e-05 26.1 1.6 1.7 1 1 1 2 2 2 1 Ribosomal L28e protein family RskA PF10099.9 NODE_50777_length_360_cov_110.652308_g42872_i0reverse_frame_1 - 0.15 12.3 0.4 0.16 12.3 0.4 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF525 PF04379.14 NODE_50775_length_360_cov_119.073846_g42870_i0reverse_frame_1 - 0.061 13.6 0.1 0.1 12.8 0.1 1.3 1 0 0 1 1 1 0 ApaG domain DUF4806 PF16064.5 NODE_50772_length_360_cov_147.190769_g42867_i0forward_frame_1 - 0.034 14.4 1.1 0.069 13.5 0.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4806) DUF1336 PF07059.12 NODE_50767_length_360_cov_241.024615_g42862_i0reverse_frame_1 - 0.14 12.1 0.1 0.21 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1336) E3_binding PF02817.17 NODE_50764_length_360_cov_324.326154_g42859_i0forward_frame_1 - 0.1 12.9 0.4 0.25 11.7 0.4 1.7 1 0 0 1 1 1 0 e3 binding domain Fer4_8 PF13183.6 NODE_50758_length_361_cov_0.990798_g42853_i0forward_frame_2 - 2.5 8.6 6.7 8.9 6.8 6.7 1.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF1980 PF09323.10 NODE_50757_length_361_cov_1.202454_g42852_i0reverse_frame_3 - 0.11 12.4 1.7 0.15 11.9 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Cyclin PF08613.11 NODE_50756_length_361_cov_1.226994_g42851_i0reverse_frame_3 - 0.067 13.5 0.1 0.067 13.5 0.1 1.2 1 0 0 1 1 1 0 Cyclin SF-assemblin PF06705.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 7.1e-07 28.8 11.3 9.8e-07 28.4 11.3 1.2 1 0 0 1 1 1 1 SF-assemblin/beta giardin DUF3450 PF11932.8 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.00028 20.3 6.3 0.00034 20.0 6.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) DUF2443 PF10398.9 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.012 15.6 3.0 0.019 15.0 0.2 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF2443) zf-C4H2 PF10146.9 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.016 15.6 14.1 0.019 15.3 14.1 1.0 1 0 0 1 1 1 0 Zinc finger-containing protein Cytochrom_B562 PF07361.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.016 15.8 3.9 0.18 12.5 0.2 2.3 1 1 1 2 2 2 0 Cytochrome b562 BCAS2 PF05700.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.027 14.2 5.0 0.039 13.6 0.3 2.1 1 1 1 2 2 2 0 Breast carcinoma amplified sequence 2 (BCAS2) DUF4254 PF14063.6 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.03 14.1 5.2 0.042 13.7 0.4 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF4254) AIG1 PF04548.16 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.033 13.5 2.5 0.037 13.4 2.5 1.1 1 0 0 1 1 1 0 AIG1 family betaPIX_CC PF16523.5 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.039 13.8 2.5 0.039 13.8 2.5 2.7 1 1 2 3 3 3 0 betaPIX coiled coil 6PF2K PF01591.18 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.046 13.0 2.9 0.055 12.8 2.5 1.4 1 1 0 1 1 1 0 6-phosphofructo-2-kinase DUF4407 PF14362.6 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.077 12.3 2.9 0.089 12.1 2.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) dCache_2 PF08269.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.079 12.1 6.3 0.096 11.8 6.3 1.2 1 0 0 1 1 1 0 Cache domain DUF4268 PF14088.6 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.1 12.5 7.3 0.31 10.9 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4268) Exonuc_VII_L PF02601.15 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.12 12.0 5.5 0.13 11.8 5.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3573 PF12097.8 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.28 10.0 1.2 0.29 9.9 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) Med2 PF11214.8 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.41 10.8 10.6 2 8.6 10.5 1.9 1 1 0 1 1 1 0 Mediator complex subunit 2 Mgr1 PF08602.10 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.45 9.3 4.8 0.51 9.1 4.8 1.1 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit Osmo_CC PF08946.10 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 0.92 9.8 8.9 0.25 11.6 3.9 2.6 1 1 1 2 2 2 0 Osmosensory transporter coiled coil DUF1640 PF07798.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 1 9.4 12.7 8.1 6.5 12.7 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) CBP4 PF07960.11 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 1 9.2 7.8 3.4 7.5 0.3 2.7 1 1 1 2 2 2 0 CBP4 LMBR1 PF04791.16 NODE_50753_length_361_cov_1.530675_g42848_i0reverse_frame_3 - 2.2 7.1 6.6 2.4 6.9 6.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF1980 PF09323.10 NODE_50753_length_361_cov_1.530675_g42848_i0forward_frame_3 - 2.7 7.9 7.4 4.6 7.1 7.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) BPD_transp_2 PF02653.16 NODE_50746_length_361_cov_1.972393_g42841_i0forward_frame_3 - 9.8e-08 31.5 7.9 9.8e-08 31.5 7.9 1.9 2 0 0 2 2 2 2 Branched-chain amino acid transport system / permease component Phage_cap_E PF03864.15 NODE_50744_length_361_cov_2.098160_g42839_i0reverse_frame_2 - 0.12 11.6 0.0 0.12 11.5 0.0 1.0 1 0 0 1 1 1 0 Phage major capsid protein E Troponin-I_N PF11636.8 NODE_50743_length_361_cov_2.220859_g42838_i0reverse_frame_2 - 1.6 8.7 8.5 0.31 11.0 3.3 2.2 2 0 0 2 2 2 0 Troponin I residues 1-32 Ketoacyl-synt_2 PF13723.6 NODE_50739_length_361_cov_2.407975_g42834_i0reverse_frame_3 - 0.056 13.1 0.1 0.072 12.7 0.1 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain GGDEF PF00990.21 NODE_50738_length_361_cov_2.542945_g42833_i0forward_frame_3 - 5.8e-23 81.4 0.0 6.7e-23 81.2 0.0 1.0 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 NODE_50738_length_361_cov_2.542945_g42833_i0forward_frame_3 - 0.048 13.9 0.0 0.063 13.5 0.0 1.2 1 0 0 1 1 1 0 GGDEF-like domain DsbG_N PF18257.1 NODE_50737_length_361_cov_2.592025_g42832_i0forward_frame_2 - 0.22 11.7 0.0 0.28 11.4 0.0 1.3 1 0 0 1 1 1 0 Disulfide isomerase DsbG N-terminal PapD_N PF00345.20 NODE_50732_length_361_cov_3.012270_g42827_i0forward_frame_2 - 8e-37 125.9 0.0 8.9e-37 125.8 0.0 1.0 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain Pkinase PF00069.25 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 4e-22 78.8 0.0 4.6e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 6.1e-14 51.9 0.0 6.6e-14 51.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 0.0036 16.3 0.0 0.0048 15.9 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain ABC1 PF03109.16 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 0.0075 16.4 0.1 0.042 14.0 0.1 1.9 1 1 1 2 2 2 1 ABC1 family Pyr_redox_dim PF02852.22 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 0.05 13.9 0.0 0.064 13.5 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Kinase-like PF14531.6 NODE_50731_length_361_cov_3.116564_g42826_i0forward_frame_3 - 0.076 12.3 0.0 0.091 12.1 0.0 1.1 1 0 0 1 1 1 0 Kinase-like FBA_3 PF08268.12 NODE_50730_length_361_cov_3.248466_g42825_i0reverse_frame_2 - 0.15 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 F-box associated domain Invasin_D3 PF09134.10 NODE_50730_length_361_cov_3.248466_g42825_i0forward_frame_2 - 5.1e-08 33.1 2.4 2.3e-06 27.8 0.7 2.4 1 1 1 2 2 2 2 Invasin, domain 3 Big_1 PF02369.16 NODE_50730_length_361_cov_3.248466_g42825_i0forward_frame_2 - 7.8e-05 22.6 0.3 0.0056 16.7 0.0 2.6 2 0 0 2 2 2 1 Bacterial Ig-like domain (group 1) Big_6 PF17936.1 NODE_50730_length_361_cov_3.248466_g42825_i0forward_frame_2 - 0.0016 18.7 0.6 0.1 12.9 0.1 2.4 2 1 0 2 2 2 1 Bacterial Ig domain Glyco_hydro2_C5 PF18565.1 NODE_50730_length_361_cov_3.248466_g42825_i0forward_frame_2 - 0.013 15.4 0.1 3.9 7.4 0.0 2.3 2 1 0 2 2 2 0 Glycoside hydrolase family 2 C-terminal domain 5 Dev_Cell_Death PF10539.9 NODE_50729_length_361_cov_3.273006_g42824_i0reverse_frame_3 - 0.034 14.0 0.0 0.041 13.8 0.0 1.1 1 0 0 1 1 1 0 Development and cell death domain Gamma-thionin PF00304.20 NODE_50727_length_361_cov_3.757669_g42822_i0reverse_frame_2 - 1.3 9.3 7.0 3.1 8.2 7.0 1.7 1 1 0 1 1 1 0 Gamma-thionin family DUF1754 PF08555.10 NODE_50727_length_361_cov_3.757669_g42822_i0forward_frame_3 - 0.069 13.9 9.0 0.15 12.9 9.0 1.6 1 1 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) Consortin_C PF15281.6 NODE_50727_length_361_cov_3.757669_g42822_i0forward_frame_3 - 0.091 12.8 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Consortin C-terminus KAAG1 PF15354.6 NODE_50726_length_361_cov_6.751534_g42821_i0reverse_frame_3 - 0.069 13.7 1.7 0.11 13.1 0.9 1.7 1 1 1 2 2 2 0 Kidney-associated antigen 1 EbsA PF17255.2 NODE_50724_length_361_cov_24.739264_g42819_i0forward_frame_2 - 0.086 13.2 1.4 0.15 12.4 1.4 1.3 1 0 0 1 1 1 0 EbsA-like protein Tyosinase_C PF18132.1 NODE_50721_length_361_cov_48.147239_g42816_i0reverse_frame_2 - 0.022 15.4 0.3 0.024 15.3 0.3 1.2 1 0 0 1 1 1 0 Tyosinase C-terminal domain Sec62 PF03839.16 NODE_50719_length_361_cov_53.987730_g42814_i0reverse_frame_2 - 1.5 8.3 9.6 0.91 9.0 8.4 1.3 1 1 0 1 1 1 0 Translocation protein Sec62 DUF4852 PF16144.5 NODE_50719_length_361_cov_53.987730_g42814_i0forward_frame_3 - 0.039 14.1 1.8 0.069 13.3 1.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4852) Tubulin PF00091.25 NODE_50719_length_361_cov_53.987730_g42814_i0forward_frame_3 - 0.06 13.5 0.0 0.063 13.5 0.0 1.1 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain DAN PF03045.15 NODE_50715_length_361_cov_64.411043_g42810_i0reverse_frame_2 - 0.04 14.0 2.2 0.049 13.7 2.2 1.1 1 0 0 1 1 1 0 DAN domain MTHFR_C PF12225.8 NODE_50715_length_361_cov_64.411043_g42810_i0forward_frame_3 - 0.046 13.4 8.7 0.41 10.3 1.3 2.2 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal TPR_10 PF13374.6 NODE_50715_length_361_cov_64.411043_g42810_i0forward_frame_2 - 0.018 14.9 0.4 0.04 13.8 0.4 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat Peptidase_S9 PF00326.21 NODE_50713_length_361_cov_72.361963_g42808_i0reverse_frame_2 - 0.003 17.1 0.0 0.0032 17.0 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF1150 PF06620.11 NODE_50713_length_361_cov_72.361963_g42808_i0reverse_frame_2 - 0.041 14.0 0.0 0.07 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1150) TT1725 PF18324.1 NODE_50711_length_361_cov_73.834356_g42806_i0forward_frame_2 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Hypothetical protein TT1725 DUF3112 PF11309.8 NODE_50708_length_361_cov_76.374233_g42803_i0reverse_frame_3 - 0.44 10.0 2.8 0.95 8.9 0.2 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3112) Metallothio_Euk PF12749.7 NODE_50707_length_361_cov_78.147239_g42802_i0reverse_frame_2 - 0.32 11.2 7.9 0.69 10.1 7.9 1.6 1 1 0 1 1 1 0 Eukaryotic metallothionein DUF2405 PF10293.9 NODE_50706_length_361_cov_78.226994_g42801_i0reverse_frame_2 - 0.023 14.7 0.1 0.026 14.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2405) NADH_oxidored PF08040.11 NODE_50703_length_361_cov_83.819018_g42798_i0forward_frame_3 - 0.07 12.8 0.2 0.11 12.2 0.2 1.3 1 0 0 1 1 1 0 MNLL subunit Acyl-thio_N PF12590.8 NODE_50702_length_361_cov_92.300613_g42797_i0forward_frame_3 - 0.075 13.6 0.1 0.094 13.3 0.1 1.1 1 0 0 1 1 1 0 Acyl-ATP thioesterase SsgA PF04686.12 NODE_50696_length_361_cov_116.978528_g42791_i0forward_frame_3 - 0.025 14.6 0.2 1.1 9.3 0.1 2.1 1 1 1 2 2 2 0 Streptomyces sporulation and cell division protein, SsgA zf-PARP PF00645.18 NODE_50690_length_361_cov_172.061350_g42785_i0reverse_frame_3 - 0.52 11.2 0.1 0.52 11.2 0.1 2.2 1 1 1 2 2 2 0 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region DUF2227 PF09988.9 NODE_50689_length_361_cov_186.015337_g42784_i0reverse_frame_3 - 0.058 13.3 0.0 0.065 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized metal-binding protein (DUF2227) Transferrin PF00405.17 NODE_50689_length_361_cov_186.015337_g42784_i0reverse_frame_2 - 0.063 12.4 0.1 0.063 12.4 0.1 1.6 2 0 0 2 2 2 0 Transferrin PHD_2 PF13831.6 NODE_50685_length_361_cov_225.052147_g42780_i0reverse_frame_2 - 1.4 8.5 5.1 3 7.5 0.1 2.4 2 0 0 2 2 2 0 PHD-finger BCHF PF07284.11 NODE_50671_length_362_cov_1.308869_g42767_i0forward_frame_3 - 0.0051 16.8 0.1 0.0064 16.5 0.1 1.2 1 0 0 1 1 1 1 2-vinyl bacteriochlorophyllide hydratase (BCHF) Pho86 PF11124.8 NODE_50671_length_362_cov_1.308869_g42767_i0forward_frame_3 - 0.03 13.8 0.1 0.034 13.6 0.1 1.0 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 M11L PF11099.8 NODE_50671_length_362_cov_1.308869_g42767_i0forward_frame_3 - 0.048 13.9 0.1 0.063 13.6 0.1 1.2 1 0 0 1 1 1 0 Apoptosis regulator M11L like DNA_pol3_a_NII PF11490.8 NODE_50669_length_362_cov_1.703364_g42765_i0reverse_frame_2 - 0.00037 20.4 0.3 0.0005 19.9 0.3 1.2 1 0 0 1 1 1 1 DNA polymerase III polC-type N-terminus II Josephin PF02099.17 NODE_50668_length_362_cov_1.761468_g42764_i0reverse_frame_2 - 1.4e-07 31.7 0.1 3.6e-07 30.4 0.0 1.6 2 0 0 2 2 2 1 Josephin G10 PF01125.17 NODE_50668_length_362_cov_1.761468_g42764_i0reverse_frame_2 - 0.025 14.4 0.3 0.097 12.4 0.0 1.9 2 0 0 2 2 2 0 G10 protein DUF4467 PF14729.6 NODE_50668_length_362_cov_1.761468_g42764_i0reverse_frame_2 - 0.075 13.4 0.0 0.15 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function with cystatin-like fold (DUF4467) WD40 PF00400.32 NODE_50667_length_362_cov_1.883792_g42763_i0forward_frame_2 - 1.1e-07 32.4 0.1 1.9e-05 25.3 0.1 2.6 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_50667_length_362_cov_1.883792_g42763_i0forward_frame_2 - 0.0013 19.0 0.0 0.0027 18.0 0.0 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Copine PF07002.16 NODE_50663_length_362_cov_1.975535_g42759_i0forward_frame_3 - 3.3e-08 33.3 0.1 4.1e-08 32.9 0.1 1.1 1 0 0 1 1 1 1 Copine EPSP_synthase PF00275.20 NODE_50657_length_362_cov_2.235474_g42753_i0forward_frame_2 - 1.9e-31 109.2 0.1 2e-31 109.1 0.1 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Nitrate_red_del PF02613.15 NODE_50655_length_362_cov_2.443425_g42751_i0forward_frame_3 - 0.01 15.9 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 0 Nitrate reductase delta subunit DUF5431 PF17496.2 NODE_50653_length_362_cov_2.495413_g42749_i0reverse_frame_3 - 7.1e-07 29.3 0.0 1.5e-06 28.2 0.0 1.5 1 1 1 2 2 2 1 Family of unknown function (DUF5431) Ribosomal_L41 PF05162.13 NODE_50653_length_362_cov_2.495413_g42749_i0forward_frame_3 - 0.044 13.8 1.9 0.044 13.8 1.9 1.8 2 0 0 2 2 2 0 Ribosomal protein L41 Osw5 PF17062.5 NODE_50649_length_362_cov_2.724771_g42745_i0reverse_frame_2 - 0.14 12.2 3.3 0.17 12.0 0.1 2.1 1 1 1 2 2 2 0 Outer spore wall 5 Myb_DNA-binding PF00249.31 NODE_50649_length_362_cov_2.724771_g42745_i0forward_frame_3 - 3.2e-21 75.2 1.5 3.1e-15 56.1 0.2 2.2 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_50649_length_362_cov_2.724771_g42745_i0forward_frame_3 - 1.7e-18 66.6 4.7 2.2e-09 37.4 0.4 2.1 1 1 1 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_50649_length_362_cov_2.724771_g42745_i0forward_frame_3 - 0.00035 20.4 0.1 0.00048 20.0 0.1 1.4 1 1 0 1 1 1 1 Myb DNA-binding like MIR PF02815.19 NODE_50646_length_362_cov_3.382263_g42742_i0forward_frame_2 - 0.041 13.7 0.1 0.044 13.6 0.1 1.1 1 0 0 1 1 1 0 MIR domain AAA_7 PF12775.7 NODE_50642_length_362_cov_34.073394_g42738_i0reverse_frame_2 - 0.0092 15.5 2.6 0.011 15.3 2.6 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region C_GCAxxG_C_C PF09719.10 NODE_50642_length_362_cov_34.073394_g42738_i0reverse_frame_2 - 0.16 12.2 0.5 0.22 11.8 0.5 1.4 1 1 0 1 1 1 0 Putative redox-active protein (C_GCAxxG_C_C) PPR_long PF17177.4 NODE_50641_length_362_cov_43.483180_g42737_i0reverse_frame_2 - 1.4e-09 37.7 0.3 1.6e-09 37.5 0.3 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 NODE_50641_length_362_cov_43.483180_g42737_i0reverse_frame_2 - 0.12 12.4 0.0 6.7 6.9 0.0 2.7 1 1 3 4 4 4 0 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_50641_length_362_cov_43.483180_g42737_i0reverse_frame_2 - 0.13 12.5 0.0 2.7 8.3 0.0 2.2 2 0 0 2 2 2 0 PPR repeat family TPR_4 PF07721.14 NODE_50641_length_362_cov_43.483180_g42737_i0reverse_frame_2 - 0.54 11.1 18.5 8.2 7.4 0.1 4.1 4 1 0 4 4 4 0 Tetratricopeptide repeat Tropomyosin_1 PF12718.7 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.0026 17.9 4.2 0.0037 17.4 4.2 1.1 1 0 0 1 1 1 1 Tropomyosin like GAS PF13851.6 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.009 15.4 9.2 0.011 15.1 9.2 1.2 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding FlxA PF14282.6 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.011 15.7 8.3 0.11 12.5 1.7 2.2 1 1 1 2 2 2 0 FlxA-like protein Baculo_PEP_C PF04513.12 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.078 13.0 2.3 0.31 11.1 2.1 1.8 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus GTP-bdg_M PF16360.5 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 0.31 11.7 3.2 0.34 11.5 1.6 1.8 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region XhlA PF10779.9 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_3 - 1.9 8.7 5.7 18 5.6 1.0 2.6 2 1 0 2 2 2 0 Haemolysin XhlA Stealth_CR3 PF17102.5 NODE_50638_length_362_cov_50.718654_g42734_i0reverse_frame_2 - 0.18 11.7 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 YCF90 PF17088.5 NODE_50638_length_362_cov_50.718654_g42734_i0forward_frame_3 - 0.057 12.7 8.4 0.064 12.6 8.4 1.0 1 0 0 1 1 1 0 Uncharacterised protein family Gaa1 PF04114.14 NODE_50637_length_362_cov_51.605505_g42733_i0forward_frame_3 - 1.1 8.1 9.0 1.3 8.0 9.0 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component TMEM100 PF16311.5 NODE_50634_length_362_cov_64.412844_g42730_i0forward_frame_2 - 0.024 14.2 0.5 0.041 13.5 0.4 1.6 1 1 0 1 1 1 0 Transmembrane protein 100 MORN PF02493.20 NODE_50624_length_362_cov_130.272171_g42720_i0reverse_frame_3 - 2.4e-12 46.0 12.1 7.4e-07 28.7 0.3 2.8 3 0 0 3 3 3 2 MORN repeat DUF4838 PF16126.5 NODE_50624_length_362_cov_130.272171_g42720_i0reverse_frame_2 - 0.021 14.2 0.7 0.023 14.1 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4838) SIP PF04954.13 NODE_50618_length_362_cov_222.905199_g42714_i0forward_frame_3 - 0.071 13.6 0.0 0.096 13.2 0.0 1.1 1 0 0 1 1 1 0 Siderophore-interacting protein DUF1496 PF07383.12 NODE_50618_length_362_cov_222.905199_g42714_i0forward_frame_2 - 0.072 12.7 0.7 0.11 12.1 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1496) Fibrillin_U_N PF18193.1 NODE_50616_length_362_cov_248.626911_g42712_i0reverse_frame_3 - 0.25 11.5 4.1 0.44 10.7 4.1 1.4 1 0 0 1 1 1 0 Fibrillin 1 unique N-terminal domain Sterile PF03015.19 NODE_50615_length_362_cov_251.373089_g42711_i0reverse_frame_2 - 0.0074 16.5 0.7 0.042 14.1 0.1 2.2 2 1 0 2 2 2 1 Male sterility protein DUF4213 PF13938.6 NODE_50615_length_362_cov_251.373089_g42711_i0reverse_frame_2 - 0.02 15.1 0.0 0.033 14.4 0.0 1.3 1 0 0 1 1 1 0 Putative heavy-metal chelation LSM PF01423.22 NODE_50614_length_362_cov_290.932722_g42710_i0forward_frame_2 - 1.8e-12 46.8 0.1 2.3e-12 46.4 0.1 1.2 1 0 0 1 1 1 1 LSM domain EVC2_like PF12297.8 NODE_50611_length_362_cov_339.321101_g42707_i0forward_frame_3 - 0.37 9.4 1.5 0.46 9.1 1.5 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein DNA_methylase PF00145.17 NODE_50601_length_363_cov_1.503049_g42697_i0forward_frame_3 - 3e-09 36.7 0.0 3.7e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Creatinase_N PF01321.18 NODE_50600_length_363_cov_1.670732_g42696_i0reverse_frame_2 - 0.085 13.5 0.0 0.11 13.1 0.0 1.3 1 0 0 1 1 1 0 Creatinase/Prolidase N-terminal domain MarC PF01914.17 NODE_50600_length_363_cov_1.670732_g42696_i0forward_frame_3 - 0.086 12.2 0.1 0.11 11.9 0.1 1.2 1 0 0 1 1 1 0 MarC family integral membrane protein DUF1122 PF06557.11 NODE_50598_length_363_cov_1.737805_g42694_i0forward_frame_3 - 0.1 12.1 0.0 0.14 11.5 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1122) eIF2_C PF09173.11 NODE_50597_length_363_cov_1.789634_g42693_i0forward_frame_3 - 0.0086 16.3 0.6 0.79 10.0 0.3 2.2 2 0 0 2 2 2 2 Initiation factor eIF2 gamma, C terminal Myticin-prepro PF10690.9 NODE_50591_length_363_cov_2.024390_g42687_i0reverse_frame_3 - 0.93 9.8 8.0 0.16 12.2 4.2 1.6 1 1 0 2 2 2 0 Myticin pre-proprotein from the mussel Fer4 PF00037.27 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 5.1e-11 41.9 15.8 0.0001 22.0 2.9 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.3e-10 41.3 8.2 8.9e-06 25.8 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 7.7e-10 39.2 8.2 7.3e-05 23.3 2.4 2.5 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.6e-08 34.3 17.8 1.5e-05 24.8 3.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 3.2e-08 33.5 26.8 9.3e-07 28.9 15.6 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 3.4e-08 33.5 10.9 3.4e-08 33.5 10.9 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 5.6e-07 30.0 12.6 0.011 16.3 6.7 2.9 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.8e-06 28.0 18.3 0.0013 19.1 1.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 4.2e-06 26.9 14.3 0.00027 21.1 10.5 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 4.9e-06 26.3 19.9 0.00024 21.0 2.2 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_5 PF12801.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.3e-05 25.0 0.4 1.3e-05 25.0 0.4 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.4e-05 25.4 15.9 0.003 18.0 1.6 2.6 1 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 3e-05 24.6 21.1 0.021 15.7 6.2 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 0.00011 23.0 16.2 0.14 13.1 3.3 3.1 2 1 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 0.0027 18.5 10.8 0.027 15.3 0.4 2.4 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 0.021 15.4 17.7 0.34 11.5 4.0 2.9 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I DUF3592 PF12158.8 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 0.12 12.5 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) Fer4_15 PF13459.6 NODE_50590_length_363_cov_2.060976_g42686_i0forward_frame_2 - 1.1 10.0 11.6 1.6 9.5 1.1 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain NitrOD1 PF18549.1 NODE_50586_length_363_cov_2.103659_g42682_i0reverse_frame_2 - 0.13 12.2 0.2 0.23 11.4 0.2 1.4 1 0 0 1 1 1 0 Nitrosopumilus output domain 1 Fe_dep_repress PF01325.19 NODE_50586_length_363_cov_2.103659_g42682_i0forward_frame_3 - 0.00069 19.8 0.0 0.0011 19.1 0.0 1.2 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 NODE_50586_length_363_cov_2.103659_g42682_i0forward_frame_3 - 0.0024 17.7 0.0 0.0035 17.2 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 NODE_50586_length_363_cov_2.103659_g42682_i0forward_frame_3 - 0.0054 16.6 0.1 0.0078 16.1 0.1 1.3 1 0 0 1 1 1 1 MarR family TMEM220 PF15071.6 NODE_50585_length_363_cov_2.143293_g42681_i0reverse_frame_2 - 0.081 13.7 0.9 0.13 13.0 0.9 1.4 1 0 0 1 1 1 0 Transmembrane family 220, helix RnlA_toxin PF15935.5 NODE_50585_length_363_cov_2.143293_g42681_i0forward_frame_3 - 0.023 14.5 0.1 0.026 14.3 0.1 1.2 1 0 0 1 1 1 0 RNase LS, bacterial toxin Neurensin PF14927.6 NODE_50583_length_363_cov_2.189024_g42679_i0forward_frame_3 - 0.12 12.0 3.9 0.25 11.0 3.9 1.5 1 0 0 1 1 1 0 Neurensin Peptidase_C2 PF00648.21 NODE_50578_length_363_cov_2.500000_g42674_i0reverse_frame_2 - 3.4e-32 111.7 0.0 3.6e-32 111.6 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Pkinase PF00069.25 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 1.7e-29 103.0 0.2 1.8e-29 102.9 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 7.4e-13 48.4 0.0 9.5e-13 48.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Choline_kinase PF01633.20 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 0.00011 21.9 2.0 0.0028 17.3 1.2 2.1 1 1 1 2 2 2 2 Choline/ethanolamine kinase RIO1 PF01163.22 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 0.0058 16.2 0.1 0.0064 16.1 0.1 1.2 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 0.011 15.7 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 NODE_50575_length_363_cov_2.710366_g42671_i0reverse_frame_3 - 0.079 12.3 0.1 0.092 12.1 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family PalH PF08733.10 NODE_50575_length_363_cov_2.710366_g42671_i0forward_frame_3 - 0.0034 16.4 1.8 0.0036 16.3 1.8 1.0 1 0 0 1 1 1 1 PalH/RIM21 Metaviral_G PF09595.10 NODE_50570_length_363_cov_3.085366_g42666_i0forward_frame_3 - 1.9 8.5 9.2 2.4 8.2 9.2 1.2 1 0 0 1 1 1 0 Metaviral_G glycoprotein Cys_rich_CWC PF14375.6 NODE_50570_length_363_cov_3.085366_g42666_i0forward_frame_2 - 0.021 15.2 0.7 0.025 15.0 0.7 1.4 1 1 0 1 1 1 0 Cysteine-rich CWC AAA_7 PF12775.7 NODE_50564_length_363_cov_44.082317_g42660_i0forward_frame_3 - 0.035 13.6 0.3 0.069 12.7 0.4 1.5 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_membrane PF00664.23 NODE_50560_length_363_cov_61.201220_g42656_i0reverse_frame_3 - 7.8e-06 25.7 0.4 1.2e-05 25.1 0.3 1.3 1 1 0 1 1 1 1 ABC transporter transmembrane region YMF19 PF02326.15 NODE_50560_length_363_cov_61.201220_g42656_i0forward_frame_2 - 0.022 15.5 0.7 0.022 15.5 0.7 2.2 1 1 1 2 2 2 0 Plant ATP synthase F0 DHH PF01368.20 NODE_50556_length_363_cov_66.457317_g42652_i0forward_frame_2 - 0.1 12.8 0.2 0.13 12.5 0.2 1.1 1 0 0 1 1 1 0 DHH family OTT_1508_deam PF14441.6 NODE_50556_length_363_cov_66.457317_g42652_i0forward_frame_2 - 0.43 10.6 3.5 0.62 10.1 3.5 1.5 1 1 0 1 1 1 0 OTT_1508-like deaminase DUF1658 PF07871.11 NODE_50553_length_363_cov_70.972561_g42649_i0forward_frame_2 - 0.6 10.2 6.6 0.19 11.7 3.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) DUF1156 PF06634.12 NODE_50549_length_363_cov_74.820122_g42646_i0forward_frame_2 - 0.021 14.9 1.8 0.021 14.9 1.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1156) Nrf1_DNA-bind PF10491.9 NODE_50548_length_363_cov_75.786585_g42645_i0forward_frame_2 - 0.041 13.6 3.9 0.054 13.2 3.9 1.1 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 Ank_2 PF12796.7 NODE_50547_length_363_cov_76.564024_g42644_i0reverse_frame_2 - 1.3e-11 44.9 0.1 1.8e-11 44.5 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_50547_length_363_cov_76.564024_g42644_i0reverse_frame_2 - 7.1e-08 32.6 0.4 0.00072 19.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_50547_length_363_cov_76.564024_g42644_i0reverse_frame_2 - 2.2e-07 30.6 0.1 0.00038 20.7 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeat Ank_4 PF13637.6 NODE_50547_length_363_cov_76.564024_g42644_i0reverse_frame_2 - 3.5e-06 27.4 0.1 1.9e-05 25.1 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_50547_length_363_cov_76.564024_g42644_i0reverse_frame_2 - 0.00036 20.8 0.4 0.02 15.2 0.2 2.1 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ribosomal_L18 PF17135.4 NODE_50547_length_363_cov_76.564024_g42644_i0reverse_frame_2 - 0.034 13.5 0.3 0.11 11.8 0.1 1.7 2 0 0 2 2 2 0 Ribosomal protein 60S L18 and 50S L18e VWA_3_C PF18571.1 NODE_50547_length_363_cov_76.564024_g42644_i0reverse_frame_2 - 0.035 14.0 0.6 1.7 8.6 0.0 2.5 3 0 0 3 3 3 0 von Willebrand factor type A C-terminal domain EamA PF00892.20 NODE_50546_length_363_cov_77.926829_g42643_i0reverse_frame_2 - 6e-10 39.4 0.4 9.6e-10 38.8 0.4 1.3 1 0 0 1 1 1 1 EamA-like transporter family Mg_trans_NIPA PF05653.14 NODE_50546_length_363_cov_77.926829_g42643_i0reverse_frame_2 - 0.039 13.1 0.2 0.043 12.9 0.2 1.1 1 0 0 1 1 1 0 Magnesium transporter NIPA EmrE PF13536.6 NODE_50546_length_363_cov_77.926829_g42643_i0reverse_frame_2 - 0.084 12.5 1.0 0.35 10.4 0.6 1.8 1 1 0 1 1 1 0 Putative multidrug resistance efflux transporter DUF5472 PF17566.2 NODE_50541_length_363_cov_82.631098_g42638_i0reverse_frame_3 - 0.09 12.7 0.3 0.18 11.8 0.3 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5472) INO80_Ies4 PF08193.11 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 0.036 14.1 10.7 0.041 13.9 10.7 1.0 1 0 0 1 1 1 0 INO80 complex subunit Ies4 AMOP PF03782.17 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 0.041 14.0 4.3 0.05 13.7 4.3 1.1 1 0 0 1 1 1 0 AMOP domain HGTP_anticodon2 PF12745.7 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 0.59 9.6 17.2 0.64 9.5 17.2 1.0 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs AAA_11 PF13086.6 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 4.7 6.9 15.7 5.2 6.8 15.7 1.0 1 0 0 1 1 1 0 AAA domain DDHD PF02862.17 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 5.5 7.1 11.2 5.9 7.0 11.2 1.1 1 0 0 1 1 1 0 DDHD domain HSP70 PF00012.20 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 5.6 5.0 14.6 6.4 4.8 14.6 1.0 1 0 0 1 1 1 0 Hsp70 protein CDC45 PF02724.14 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 7.8 4.7 18.3 8.3 4.6 18.3 1.0 1 0 0 1 1 1 0 CDC45-like protein Zip PF02535.22 NODE_50539_length_363_cov_84.487805_g42636_i0reverse_frame_2 - 9.4 5.3 10.6 9.8 5.3 10.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Hex_IIIa PF02455.16 NODE_50535_length_363_cov_102.652439_g42632_i0reverse_frame_2 - 0.009 14.8 0.1 0.0094 14.8 0.1 1.0 1 0 0 1 1 1 1 Hexon-associated protein (IIIa) FANCF PF11107.8 NODE_50535_length_363_cov_102.652439_g42632_i0forward_frame_3 - 0.15 11.3 0.2 0.15 11.2 0.2 1.1 1 0 0 1 1 1 0 Fanconi anemia group F protein (FANCF) B3R PF17057.5 NODE_50535_length_363_cov_102.652439_g42632_i0forward_frame_3 - 2.2 8.5 4.0 15 5.8 0.3 2.1 1 1 1 2 2 2 0 Poxviridae B3 protein HU-CCDC81_bac_1 PF18174.1 NODE_50529_length_363_cov_144.868902_g42626_i0reverse_frame_3 - 0.00013 21.8 0.0 4.7 7.2 0.0 3.2 2 1 1 3 3 3 3 CCDC81-like prokaryotic HU domain 1 ESPR PF13018.6 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_3 - 5.6 6.9 6.1 66 3.4 0.1 4.2 5 0 0 5 5 5 0 Extended Signal Peptide of Type V secretion system lci PF12197.8 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_3 - 9.8 6.1 5.9 37 4.2 0.1 3.7 5 0 0 5 5 5 0 Bacillus cereus group antimicrobial protein Toxin_19 PF08088.12 NODE_50529_length_363_cov_144.868902_g42626_i0forward_frame_2 - 0.35 11.0 2.6 19 5.4 0.1 2.6 2 1 0 2 2 2 0 Conotoxin I-superfamily K-box PF01486.17 NODE_50517_length_363_cov_598.286585_g42614_i0reverse_frame_3 - 0.012 15.8 4.7 0.018 15.2 4.7 1.3 1 0 0 1 1 1 0 K-box region DUF3671 PF12420.8 NODE_50517_length_363_cov_598.286585_g42614_i0reverse_frame_3 - 0.045 13.8 1.3 0.062 13.4 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks219.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks219.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks219.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks219.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase PF00069.25 ORF86365 - 1e-74 251.3 0.3 2.5e-74 250.0 0.3 1.7 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86365 - 1.3e-37 129.5 0.1 2.3e-37 128.7 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF86365 - 1.7e-22 77.2 17.6 3.1e-07 29.5 0.4 5.3 5 0 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF86365 - 7.2e-22 77.6 9.4 4.3e-11 43.1 2.2 3.3 3 1 1 4 4 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF86365 - 3.1e-20 70.3 6.6 1.6e-06 27.6 0.1 5.1 3 1 1 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF86365 - 2.8e-18 64.5 4.2 1.3e-07 30.8 0.2 4.8 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF86365 - 1.1e-15 57.2 5.2 3.3e-06 26.8 0.0 4.0 3 1 1 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF86365 - 7.6e-08 32.7 8.4 0.00016 21.9 1.4 3.3 2 1 1 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF86365 - 3.8e-05 23.1 0.2 0.00017 21.0 0.2 2.1 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF86365 - 0.00083 19.3 0.0 0.0075 16.2 0.0 2.2 1 1 0 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF86365 - 0.0017 17.9 0.8 0.0042 16.7 0.1 2.0 2 0 0 2 2 2 1 Choline/ethanolamine kinase DUF3014 PF11219.8 ORF86365 - 0.073 13.3 0.2 0.77 10.0 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3014) YrbL-PhoP_reg PF10707.9 ORF86365 - 0.16 11.5 3.4 3 7.3 3.4 2.6 1 1 0 1 1 1 0 PhoP regulatory network protein YrbL TPR_19 PF14559.6 ORF78554 - 4.1e-08 33.6 8.6 1 9.9 0.5 5.0 4 1 0 4 4 4 4 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF78554 - 6.2e-07 29.5 8.8 0.31 11.3 0.1 4.8 5 1 0 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 ORF78554 - 0.0022 18.5 2.7 2.7 8.8 0.0 5.2 6 0 0 6 6 5 1 Tetratricopeptide repeat PPR_2 PF13041.6 ORF78554 - 0.0051 17.0 0.4 0.03 14.5 0.2 2.5 3 0 0 3 3 3 1 PPR repeat family TPR_14 PF13428.6 ORF78554 - 0.0092 16.7 0.0 85 4.4 0.0 4.6 4 1 1 5 5 5 0 Tetratricopeptide repeat RasGEF_N PF00618.20 ORF78554 - 0.028 14.7 2.0 0.81 10.0 0.0 3.4 3 0 0 3 3 3 0 RasGEF N-terminal motif TPR_MalT PF17874.1 ORF78554 - 0.12 11.7 2.5 4.2 6.7 1.1 2.9 3 1 0 3 3 3 0 MalT-like TPR region TPR_2 PF07719.17 ORF78554 - 0.12 12.5 7.2 12 6.3 0.0 6.0 7 0 0 7 7 7 0 Tetratricopeptide repeat PriA_C PF18074.1 ORF78554 - 0.39 11.6 4.4 0.66 10.8 0.2 3.6 4 0 0 4 4 4 0 Primosomal protein N C-terminal domain Prp18 PF02840.15 ORF78554 - 0.72 9.9 4.3 1.4 9.0 2.6 2.4 2 0 0 2 2 2 0 Prp18 domain TPR_8 PF13181.6 ORF78554 - 2.1 8.8 18.9 1.5 9.2 0.1 6.1 8 0 0 8 8 7 0 Tetratricopeptide repeat MutS_V PF00488.21 ORF75534 - 8.7e-22 78.1 0.0 1.8e-21 77.0 0.0 1.5 1 0 0 1 1 1 1 MutS domain V AAA_21 PF13304.6 ORF75534 - 0.0095 15.8 0.0 0.043 13.6 0.0 2.0 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF724 PF05266.14 ORF75534 - 0.87 9.4 11.1 1.4 8.7 11.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 ORF75534 - 1.7 8.7 9.0 2.5 8.1 9.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3584 PF12128.8 ORF75534 - 2 5.8 21.4 3.3 5.1 21.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_23 PF13476.6 ORF75534 - 3.6 8.0 6.6 19 5.7 2.5 2.3 2 0 0 2 2 2 0 AAA domain GBP_C PF02841.14 ORF75534 - 6.8 6.0 16.4 28 4.0 15.1 2.0 2 0 0 2 2 2 0 Guanylate-binding protein, C-terminal domain PALP PF00291.25 ORF74344 - 1.6e-65 221.4 0.0 2.1e-65 221.0 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CBS PF00571.28 ORF74344 - 5.9e-08 33.0 0.6 8.5e-06 26.1 0.1 3.1 2 0 0 2 2 2 2 CBS domain Avl9 PF09794.9 ORF57725 - 2.4e-57 194.3 8.9 2.3e-55 187.9 8.9 2.2 1 1 0 1 1 1 1 Transport protein Avl9 SPA PF08616.10 ORF57725 - 4.8e-10 39.4 4.3 1.6e-09 37.7 2.0 2.7 2 1 0 2 2 2 1 Stabilization of polarity axis DUF2347 PF09804.9 ORF57725 - 4.5e-09 36.3 16.4 8.1e-09 35.5 6.6 3.8 1 1 1 2 2 2 1 Uncharacterized conserved protein (DUF2347) DENN PF02141.21 ORF57725 - 0.00013 21.9 1.1 0.00013 21.9 1.1 2.9 3 1 1 4 4 4 1 DENN (AEX-3) domain DUF5595 PF18077.1 ORF57725 - 0.23 11.6 6.9 0.53 10.4 1.1 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF5595) EF-hand_7 PF13499.6 ORF49035 - 0.053 14.0 0.8 6.2 7.4 0.1 2.7 2 0 0 2 2 2 0 EF-hand domain pair DUF3017 PF11222.8 ORF49035 - 0.17 12.2 0.0 0.34 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3017) FlgM PF04316.13 ORF49035 - 0.2 12.0 0.1 0.44 10.9 0.1 1.5 1 0 0 1 1 1 0 Anti-sigma-28 factor, FlgM EamA PF00892.20 ORF43462 - 4.4e-07 30.2 30.1 0.0009 19.4 12.2 2.2 2 0 0 2 2 2 2 EamA-like transporter family DUF1488 PF07369.11 ORF26687 - 0.061 13.3 1.0 0.64 10.0 0.5 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1488) Pkinase PF00069.25 ORF18675 - 2.9e-61 207.1 0.3 1e-60 205.4 0.0 2.0 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18675 - 2.4e-36 125.4 0.0 3.7e-36 124.7 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase DEP PF00610.21 ORF18675 - 9.6e-09 35.2 0.1 9e-08 32.1 0.0 2.3 2 0 0 2 2 2 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) Kinase-like PF14531.6 ORF18675 - 1.9e-05 24.2 0.0 7.2e-05 22.2 0.0 1.9 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF18675 - 0.0002 20.2 0.0 0.00033 19.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase DUF547 PF04784.14 ORF18675 - 0.0016 18.4 0.4 0.0053 16.8 0.4 1.9 1 0 0 1 1 1 1 Protein of unknown function, DUF547 Kdo PF06293.14 ORF18675 - 0.019 14.4 0.0 0.036 13.4 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Macro PF01661.21 ORF126567 - 2.7e-32 111.3 0.0 9.6e-32 109.5 0.0 2.0 1 0 0 1 1 1 1 Macro domain DUF3450 PF11932.8 ORF126567 - 1.7 7.9 20.8 0.054 12.8 13.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF1664 PF07889.12 ORF126567 - 3.7 7.6 10.6 18 5.4 10.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Peptidase_M41 PF01434.18 ORF123045 - 6.6e-74 247.9 0.2 1e-73 247.3 0.2 1.3 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 ORF123045 - 1.5e-46 158.1 0.0 4.5e-46 156.5 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF123045 - 1.2e-11 44.2 0.1 2.4e-11 43.2 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 ORF123045 - 1.8e-06 28.0 0.0 1e-05 25.5 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 ORF123045 - 1.2e-05 24.7 0.0 2.1e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain RuvB_N PF05496.12 ORF123045 - 0.00013 21.7 0.0 0.0006 19.6 0.0 2.1 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 ORF123045 - 0.00033 21.1 1.4 0.019 15.4 0.1 3.1 3 1 1 4 4 3 1 AAA ATPase domain CSTF2_hinge PF14327.6 ORF123045 - 0.001 19.4 0.2 0.0021 18.5 0.2 1.5 1 0 0 1 1 1 1 Hinge domain of cleavage stimulation factor subunit 2 AAA_33 PF13671.6 ORF123045 - 0.0013 18.9 0.0 0.0034 17.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF123045 - 0.0019 17.9 0.0 0.0065 16.2 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein ParB_C PF18064.1 ORF123045 - 0.0021 18.2 0.3 2.9 8.1 0.1 2.7 2 0 0 2 2 2 2 Centromere-binding protein ParB C-terminal AAA_2 PF07724.14 ORF123045 - 0.0036 17.5 0.1 0.012 15.7 0.0 2.0 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 ORF123045 - 0.0036 16.7 0.8 0.007 15.8 0.2 1.7 2 0 0 2 2 1 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 ORF123045 - 0.0037 17.5 0.5 0.15 12.3 0.1 2.8 2 1 1 3 3 3 1 AAA domain ABC_tran PF00005.27 ORF123045 - 0.014 15.9 0.9 0.17 12.4 0.1 2.6 3 0 0 3 3 3 0 ABC transporter Sigma54_activat PF00158.26 ORF123045 - 0.036 13.8 0.0 0.2 11.3 0.0 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 ORF123045 - 0.04 13.2 0.1 0.087 12.1 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_7 PF12775.7 ORF123045 - 0.056 12.9 0.3 0.17 11.4 0.3 1.8 1 1 0 1 1 1 0 P-loop containing dynein motor region PhoH PF02562.16 ORF123045 - 0.075 12.5 0.3 0.18 11.2 0.3 1.6 1 0 0 1 1 1 0 PhoH-like protein Sigma54_activ_2 PF14532.6 ORF123045 - 0.079 13.1 0.0 0.24 11.5 0.0 1.8 2 0 0 2 2 1 0 Sigma-54 interaction domain AAA_17 PF13207.6 ORF123045 - 0.098 13.1 0.4 0.26 11.7 0.1 2.0 2 0 0 2 2 1 0 AAA domain AAA_14 PF13173.6 ORF123045 - 0.11 12.5 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF123045 - 0.11 12.7 0.0 0.27 11.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_PrkA PF08298.11 ORF123045 - 0.11 11.3 0.0 0.19 10.6 0.0 1.3 1 0 0 1 1 1 0 PrkA AAA domain AAA_24 PF13479.6 ORF123045 - 0.12 12.1 0.0 0.3 10.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF123045 - 0.19 11.7 0.0 0.41 10.7 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 ORF123045 - 0.21 11.5 0.1 0.53 10.2 0.1 1.6 1 0 0 1 1 1 0 NACHT domain DUF4816 PF16086.5 ORF108042 - 0.025 14.5 1.6 0.025 14.5 1.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4816) SNF PF00209.18 ORF88729 - 1.1e-78 265.3 38.6 4.6e-77 259.9 38.6 2.0 1 1 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF5392 PF17370.2 ORF88729 - 0.034 14.2 3.4 0.055 13.5 0.0 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5392) DUF4175 PF13779.6 ORF73603 - 0.27 9.1 7.1 0.43 8.4 7.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) Sugar_tr PF00083.24 ORF66448 - 2.6e-64 217.8 32.2 3.1e-64 217.5 32.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF66448 - 4.6e-23 81.7 19.5 4.6e-23 81.7 19.5 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF2070 PF09843.9 ORF57874 - 0.062 11.6 0.1 0.092 11.0 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4901 PF16244.5 ORF57874 - 0.17 11.2 0.0 0.17 11.2 0.0 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4901) PEP-utilisers_N PF05524.13 ORF57874 - 0.49 10.6 4.4 1.2 9.4 0.2 2.5 1 1 1 2 2 2 0 PEP-utilising enzyme, N-terminal Spc7 PF08317.11 ORF57874 - 2.6 6.8 34.5 1.2 8.0 15.4 2.4 1 1 1 2 2 2 0 Spc7 kinetochore protein DHR10 PF18595.1 ORF57874 - 3.5 7.7 36.5 7.1 6.7 7.4 3.4 1 1 2 3 3 3 0 Designed helical repeat protein 10 domain DUF1664 PF07889.12 ORF57874 - 9.4 6.3 20.1 0.12 12.4 5.8 3.4 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) DUF4177 PF13783.6 ORF47570 - 0.25 11.7 0.6 47 4.4 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4177) zf-C2HC_2 PF13913.6 ORF40492 - 4e-24 84.0 16.7 3e-11 42.9 2.0 3.5 3 0 0 3 3 3 3 zinc-finger of a C2HC-type zf_UBZ PF18439.1 ORF40492 - 0.0055 16.3 1.1 3.9 7.1 0.2 2.9 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-C2H2 PF00096.26 ORF40492 - 0.01 16.2 4.2 2 9.0 0.1 3.8 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF40492 - 0.028 15.2 9.0 0.89 10.6 0.6 3.9 3 0 0 3 3 3 0 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF40492 - 0.054 13.3 3.7 0.64 9.8 0.2 3.4 3 0 0 3 3 3 0 zinc-finger C2H2-type c-SKI_SMAD_bind PF08782.10 ORF40492 - 0.093 13.0 4.5 0.54 10.5 0.1 3.3 3 0 0 3 3 3 0 c-SKI Smad4 binding domain YacG PF03884.14 ORF40492 - 0.25 11.1 4.5 0.11 12.2 1.1 2.3 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG DUF2318 PF10080.9 ORF40492 - 0.31 11.2 4.3 0.32 11.1 0.3 2.8 3 0 0 3 3 3 0 Predicted membrane protein (DUF2318) zf-CHCC PF10276.9 ORF40492 - 0.97 9.5 11.4 2.6 8.2 2.1 3.3 3 0 0 3 3 3 0 Zinc-finger domain HypA PF01155.19 ORF40492 - 4.1 7.5 5.9 40 4.3 0.1 3.2 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2968 PF11180.8 ORF21199 - 0.0031 17.2 0.5 0.0031 17.2 0.5 6.0 2 2 4 6 6 6 1 Protein of unknown function (DUF2968) End3 PF12761.7 ORF21199 - 0.016 15.4 24.3 0.016 15.4 24.3 4.9 1 1 3 4 4 4 0 Actin cytoskeleton-regulatory complex protein END3 TolA_bind_tri PF16331.5 ORF21199 - 0.032 14.3 1.1 0.032 14.3 1.1 7.2 3 3 3 6 6 6 0 TolA binding protein trimerisation Fe-S_assembly PF04384.13 ORF21199 - 0.11 13.1 5.7 10 6.8 0.8 3.8 2 0 0 2 2 2 0 Iron-sulphur cluster assembly APG6_N PF17675.1 ORF21199 - 0.3 11.6 117.3 1.5 9.4 24.7 6.2 1 1 4 5 5 5 0 Apg6 coiled-coil region ATG16 PF08614.11 ORF21199 - 4.4 7.5 97.9 0.073 13.3 6.0 5.9 1 1 2 5 5 5 0 Autophagy protein 16 (ATG16) AAA_28 PF13521.6 ORF149501 - 1.5e-22 80.6 0.0 2.7e-22 79.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain DAP3 PF10236.9 ORF149501 - 6.3e-05 22.3 0.0 0.00011 21.6 0.0 1.4 1 0 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 KTI12 PF08433.10 ORF149501 - 0.0046 16.5 0.0 0.022 14.2 0.0 2.1 2 0 0 2 2 2 1 Chromatin associated protein KTI12 Thymidylate_kin PF02223.17 ORF149501 - 0.0058 16.3 0.0 0.016 14.9 0.0 1.8 1 0 0 1 1 1 1 Thymidylate kinase NTPase_1 PF03266.15 ORF149501 - 0.015 15.2 0.3 0.042 13.8 0.3 1.7 1 0 0 1 1 1 0 NTPase DUF2304 PF10066.9 ORF149501 - 0.022 15.0 0.1 0.045 14.0 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) MeaB PF03308.16 ORF149501 - 0.022 13.7 0.0 0.052 12.5 0.0 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_19 PF13245.6 ORF149501 - 0.027 14.8 0.1 0.087 13.2 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 ORF149501 - 0.031 14.0 0.1 0.059 13.1 0.1 1.4 1 0 0 1 1 1 0 AAA domain UPF0180 PF03698.13 ORF149501 - 0.054 13.7 0.0 0.77 10.0 0.0 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) TRP PF06011.12 ORF143171 - 1.1e-07 31.0 7.3 1.7e-07 30.3 6.8 1.5 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel Sec7_N PF12783.7 ORF143171 - 0.03 14.2 1.5 0.055 13.4 0.5 1.8 2 1 1 3 3 3 0 Guanine nucleotide exchange factor in Golgi transport N-terminal Ivy PF08816.11 ORF143171 - 0.16 12.2 1.1 0.35 11.1 0.8 1.7 1 1 0 1 1 1 0 Inhibitor of vertebrate lysozyme (Ivy) LPAM_1 PF08139.12 ORF131276 - 0.09 13.3 1.0 0.14 12.7 1.0 1.3 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Aldedh PF00171.22 ORF12623 - 1.4e-174 581.0 0.0 1.5e-174 580.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Asp PF00026.23 ORF104046 - 1.7e-22 80.3 0.1 2.2e-22 79.9 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF104046 - 0.0073 16.1 0.0 0.022 14.5 0.0 1.7 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal ABC_tran PF00005.27 ORF80187 - 9.7e-34 116.8 1.9 2.3e-22 80.0 0.0 3.5 4 1 0 4 4 4 2 ABC transporter AAA_21 PF13304.6 ORF80187 - 1.5e-12 48.0 3.0 0.00026 20.9 0.0 3.5 2 1 1 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF80187 - 3.8e-08 33.0 0.0 0.022 14.2 0.0 3.4 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain ABC_tran_Xtn PF12848.7 ORF80187 - 2.4e-06 27.4 2.6 2.4e-06 27.4 2.6 2.6 2 0 0 2 2 2 1 ABC transporter AAA_23 PF13476.6 ORF80187 - 5.9e-05 23.7 6.0 0.004 17.7 0.0 3.2 3 0 0 3 3 3 1 AAA domain Zeta_toxin PF06414.12 ORF80187 - 0.00069 18.9 0.3 0.0021 17.3 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin RsgA_GTPase PF03193.16 ORF80187 - 0.0011 18.8 0.0 0.0031 17.4 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF80187 - 0.002 18.2 0.0 0.008 16.3 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF80187 - 0.0022 17.7 0.0 0.0045 16.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF80187 - 0.0037 17.6 0.0 0.039 14.2 0.0 2.6 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 ORF80187 - 0.0044 17.3 0.4 0.035 14.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF80187 - 0.0066 16.6 0.2 0.068 13.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF80187 - 0.01 16.4 1.8 0.032 14.8 0.0 2.8 3 1 1 4 4 4 0 AAA domain AAA_16 PF13191.6 ORF80187 - 0.013 15.9 0.3 0.037 14.4 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain SbcCD_C PF13558.6 ORF80187 - 0.014 15.6 0.1 3.3 8.0 0.0 3.6 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit MCU PF04678.13 ORF80187 - 0.017 15.2 4.1 4.1 7.5 0.1 3.2 3 0 0 3 3 3 0 Mitochondrial calcium uniporter ATP_bind_1 PF03029.17 ORF80187 - 0.066 13.0 0.2 0.26 11.0 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 ORF80187 - 0.15 12.5 0.0 0.46 10.9 0.0 1.8 2 0 0 2 2 1 0 RNA helicase AAA_15 PF13175.6 ORF80187 - 0.22 11.2 9.0 0.76 9.4 0.1 2.9 2 1 1 3 3 3 0 AAA ATPase domain Dynamin_N PF00350.23 ORF80187 - 0.24 11.5 2.9 0.33 11.0 0.0 2.4 3 0 0 3 3 3 0 Dynamin family FtsK_SpoIIIE PF01580.18 ORF80187 - 0.34 10.2 0.0 0.34 10.2 0.0 1.9 2 0 0 2 2 2 0 FtsK/SpoIIIE family Eapp_C PF10238.9 ORF80187 - 1.1 9.3 5.4 24 5.0 4.0 2.2 2 0 0 2 2 2 0 E2F-associated phosphoprotein DUF3987 PF13148.6 ORF80187 - 1.6 7.7 12.9 4 6.4 0.0 3.2 3 0 0 3 3 2 0 Protein of unknown function (DUF3987) LMBR1 PF04791.16 ORF78970 - 2e-35 122.7 37.3 2.5e-28 99.3 7.9 2.5 1 1 0 2 2 2 2 LMBR1-like membrane protein Ras PF00071.22 ORF74777 - 2.2e-09 37.1 0.0 3.4e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Ras family KAsynt_C_assoc PF16197.5 ORF74777 - 0.012 16.0 0.0 0.027 14.9 0.0 1.5 1 0 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension TTL PF03133.15 ORF60526 - 2.7e-82 276.2 4.7 2.7e-82 276.2 4.7 1.6 2 0 0 2 2 2 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF60526 - 7e-07 28.8 0.2 0.00019 20.8 0.0 2.6 2 1 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF60526 - 5.6e-05 22.5 0.0 0.045 13.0 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp HMG_box PF00505.19 ORF56366 - 1.2e-27 96.1 28.1 4.2e-15 55.9 3.4 3.5 3 0 0 3 3 3 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF56366 - 3.8e-18 65.9 16.6 1.2e-10 41.8 6.5 5.0 4 0 0 4 4 4 2 HMG-box domain MlaD PF02470.20 ORF45763 - 0.021 15.1 0.5 0.05 13.9 0.5 1.6 1 0 0 1 1 1 0 MlaD protein SSF PF00474.17 ORF40184 - 4.3e-148 493.5 29.8 6.7e-148 492.9 29.8 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family 4HB_MCP_1 PF12729.7 ORF40184 - 0.18 11.3 0.1 0.18 11.3 0.1 2.2 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction tRNA-synt_2d PF01409.20 ORF25983 - 2.9e-87 292.2 0.4 1.2e-86 290.2 0.1 1.9 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 ORF25983 - 1.9e-05 23.9 0.7 0.0015 17.7 0.0 3.0 3 1 0 3 3 3 1 tRNA synthetases class II (D, K and N) tRNA_synthFbeta PF17759.1 ORF25983 - 5e-05 22.9 0.0 0.0052 16.2 0.0 2.5 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain PheRS_DBD3 PF18553.1 ORF25983 - 0.039 14.2 0.8 0.23 11.8 0.9 2.3 2 0 0 2 2 2 0 PheRS DNA binding domain 3 tRNA-synt_2b PF00587.25 ORF25983 - 0.046 13.7 0.0 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetase class II core domain (G, H, P, S and T) Gln-synt_C-ter PF18318.1 ORF25983 - 0.053 13.4 0.4 0.24 11.2 0.1 2.1 2 0 0 2 2 2 0 Glutamine synthetase C-terminal domain cNMP_binding PF00027.29 ORF19429 - 4.3e-07 29.9 0.0 1.5e-06 28.2 0.0 2.0 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain Sulfate_transp PF00916.20 ORF19429 - 2.3e-06 26.6 0.1 3.4e-06 26.0 0.1 1.2 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 ORF19429 - 7.9e-05 22.3 0.0 0.00015 21.4 0.0 1.3 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 ORF19429 - 0.00087 19.6 0.5 0.0017 18.7 0.5 1.5 1 0 0 1 1 1 1 STAS domain TPR_1 PF00515.28 ORF149167 - 6.3e-19 66.9 0.2 1.1e-08 34.5 0.0 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF149167 - 8.1e-19 66.2 0.4 1.5e-06 27.9 0.0 4.7 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF149167 - 2.8e-09 36.4 0.2 0.0027 17.8 0.0 4.4 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF149167 - 9.3e-09 35.5 0.2 4.6e-08 33.2 0.0 2.4 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF149167 - 8.3e-08 32.8 0.0 9.9e-05 22.9 0.0 3.4 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF149167 - 3.4e-06 27.1 0.0 0.16 12.4 0.0 3.0 3 0 0 3 3 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF149167 - 3.4e-06 27.3 0.0 0.61 10.9 0.0 4.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF149167 - 4e-06 27.2 0.1 0.0057 17.1 0.0 3.2 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF149167 - 1.9e-05 25.1 1.0 2.8 9.0 0.0 4.8 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF149167 - 0.00012 21.8 0.0 0.2 11.6 0.0 3.6 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF149167 - 0.0031 17.4 0.0 0.14 12.2 0.0 3.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF149167 - 0.0034 17.0 0.0 2 8.2 0.0 3.1 1 1 2 3 3 3 1 TPR repeat ANAPC3 PF12895.7 ORF149167 - 0.0055 16.9 0.1 0.016 15.4 0.1 1.9 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 ORF149167 - 0.014 15.5 0.3 0.62 10.2 0.0 3.4 2 1 2 4 4 4 0 Tetratricopeptide repeat DUF525 PF04379.14 ORF149167 - 0.017 15.4 0.0 0.028 14.6 0.0 1.4 1 0 0 1 1 1 0 ApaG domain DUF4381 PF14316.6 ORF149167 - 1.3 9.3 5.9 4.4 7.5 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Pkinase PF00069.25 ORF143773 - 1e-59 202.1 0.0 1.6e-59 201.4 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF143773 - 1.3e-24 86.9 0.0 2.3e-24 86.1 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF143773 - 0.0032 17.4 0.0 0.0055 16.7 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF143773 - 0.034 13.1 0.1 0.034 13.1 0.1 2.2 2 0 0 2 2 2 0 Haspin like kinase domain AAA PF00004.29 ORF108255 - 4e-50 169.6 0.0 4.9e-37 127.3 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF108255 - 4.2e-11 43.5 2.0 0.0017 18.8 0.0 4.1 2 2 2 4 4 4 2 AAA ATPase domain AAA_22 PF13401.6 ORF108255 - 1.3e-10 41.6 5.1 0.00064 20.0 0.5 4.6 2 2 1 3 3 3 2 AAA domain AAA_lid_3 PF17862.1 ORF108255 - 2.1e-09 37.1 0.6 7.5e-09 35.3 0.2 2.3 2 0 0 2 2 1 1 AAA+ lid domain AAA_33 PF13671.6 ORF108255 - 5.5e-09 36.3 0.0 0.0012 19.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 ORF108255 - 4e-07 30.1 0.7 0.00017 21.6 0.1 3.0 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF108255 - 5.4e-07 29.9 0.0 3.1e-06 27.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) ABC_tran PF00005.27 ORF108255 - 1.4e-06 28.8 0.0 0.00025 21.6 0.0 2.4 2 0 0 2 2 2 1 ABC transporter AAA_18 PF13238.6 ORF108255 - 3.6e-06 27.5 0.0 0.015 15.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain NACHT PF05729.12 ORF108255 - 4.3e-06 26.7 1.5 0.21 11.5 0.0 3.6 3 0 0 3 3 3 1 NACHT domain Mg_chelatase PF01078.21 ORF108255 - 1.8e-05 24.2 0.6 0.001 18.5 0.1 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 ORF108255 - 4.3e-05 23.6 0.0 0.35 10.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 ORF108255 - 5.3e-05 23.0 0.0 0.0016 18.2 0.0 2.6 2 2 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 ORF108255 - 5.5e-05 23.2 0.1 1.6 8.6 0.0 3.3 2 2 1 3 3 3 2 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 ORF108255 - 0.00018 21.8 0.0 0.023 15.1 0.0 2.5 2 0 0 2 2 2 1 RNA helicase NB-ARC PF00931.22 ORF108255 - 0.00019 20.7 0.8 1.2 8.3 0.0 3.1 2 1 1 3 3 3 2 NB-ARC domain AAA_17 PF13207.6 ORF108255 - 0.00027 21.4 0.0 0.48 10.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain RuvB_N PF05496.12 ORF108255 - 0.00029 20.6 0.3 0.0079 16.0 0.1 2.7 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_28 PF13521.6 ORF108255 - 0.00054 20.2 0.0 0.056 13.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF108255 - 0.0011 18.6 3.8 0.13 11.9 0.1 3.6 2 2 1 3 3 3 1 AAA domain ATPase PF06745.13 ORF108255 - 0.002 17.5 0.6 0.042 13.2 0.1 2.9 4 0 0 4 4 4 1 KaiC TIP49 PF06068.13 ORF108255 - 0.0031 16.8 0.0 0.37 10.0 0.0 2.3 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_3 PF07726.11 ORF108255 - 0.0041 17.0 0.0 0.021 14.7 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 ORF108255 - 0.0054 16.3 0.1 0.081 12.4 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_30 PF13604.6 ORF108255 - 0.0072 16.1 0.1 0.24 11.1 0.0 2.8 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 ORF108255 - 0.0082 16.1 0.2 0.37 10.8 0.1 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 ORF108255 - 0.011 15.5 0.2 0.097 12.4 0.0 2.6 2 1 0 2 2 2 0 IstB-like ATP binding protein Sigma54_activat PF00158.26 ORF108255 - 0.012 15.3 0.0 1.3 8.7 0.0 2.7 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_29 PF13555.6 ORF108255 - 0.017 14.9 0.9 1.7 8.4 0.1 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain TniB PF05621.11 ORF108255 - 0.038 13.4 0.4 9.7 5.5 0.0 3.2 3 1 2 5 5 5 0 Bacterial TniB protein Torsin PF06309.11 ORF108255 - 0.065 13.3 0.0 5.5 7.1 0.0 2.5 2 0 0 2 2 2 0 Torsin AAA_11 PF13086.6 ORF108255 - 0.099 12.4 0.1 0.23 11.2 0.0 1.6 2 0 0 2 2 1 0 AAA domain ATP-synt_ab PF00006.25 ORF108255 - 0.11 12.1 0.1 1.1 8.8 0.0 2.4 3 0 0 3 3 2 0 ATP synthase alpha/beta family, nucleotide-binding domain PhoH PF02562.16 ORF108255 - 0.15 11.5 0.4 0.52 9.7 0.0 1.9 2 0 0 2 2 2 0 PhoH-like protein Parvo_NS1 PF01057.17 ORF108255 - 0.17 10.9 0.0 0.29 10.2 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_19 PF13245.6 ORF108255 - 0.18 12.2 0.2 0.79 10.1 0.1 2.1 1 1 0 2 2 1 0 AAA domain PPV_E1_C PF00519.17 ORF108255 - 0.21 10.4 0.0 0.32 9.8 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase PLU-1 PF08429.11 ORF108255 - 0.23 10.6 0.0 1.5 8.0 0.0 2.0 2 0 0 2 2 2 0 PLU-1-like protein DUF2075 PF09848.9 ORF108255 - 0.25 10.5 0.2 1.3 8.1 0.1 2.2 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) DUF963 PF06131.11 ORF100095 - 1.3e-08 34.1 75.5 0.0028 17.0 7.0 9.0 3 2 2 8 8 8 6 Schizosaccharomyces pombe repeat of unknown function (DUF963) F5_F8_type_C PF00754.25 ORF98441 - 1.1e-42 145.2 4.8 4.1e-14 52.8 0.0 3.9 4 0 0 4 4 4 3 F5/8 type C domain Mucin PF01456.17 ORF98441 - 3e-05 24.1 43.9 0.012 15.6 15.7 2.6 2 0 0 2 2 2 2 Mucin-like glycoprotein PX PF00787.24 ORF89114 - 4.3e-12 46.0 1.3 1.9e-11 44.0 0.6 2.3 1 1 1 2 2 2 1 PX domain DUF2951 PF11166.8 ORF89114 - 0.57 10.4 0.0 0.57 10.4 0.0 3.2 3 1 0 3 3 3 0 Protein of unknown function (DUF2951) CN_hydrolase PF00795.22 ORF83842 - 1.2e-38 133.0 0.0 1.5e-38 132.6 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Vps55 PF04133.14 ORF83842 - 0.032 14.2 0.3 0.082 12.9 0.3 1.6 1 0 0 1 1 1 0 Vacuolar protein sorting 55 MscS_porin PF12795.7 ORF82769 - 0.097 12.2 2.3 4.6 6.7 0.1 2.1 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain Ketoacyl-synt_C PF02801.22 ORF71410 - 1e-33 115.8 0.6 1.6e-33 115.2 0.6 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ketoacyl-synt PF00109.26 ORF71410 - 2.4e-27 96.1 0.8 5.8e-27 94.9 0.3 1.9 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain KAsynt_C_assoc PF16197.5 ORF71410 - 0.055 13.9 0.0 0.11 13.0 0.0 1.5 1 0 0 1 1 1 0 Ketoacyl-synthetase C-terminal extension FAE1_CUT1_RppA PF08392.12 ORF71410 - 0.095 12.0 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 FAE1/Type III polyketide synthase-like protein ADD_DNMT3 PF17980.1 ORF71410 - 0.13 12.3 1.0 0.33 11.0 0.3 1.9 2 0 0 2 2 2 0 Cysteine rich ADD domain in DNMT3 DnaJ PF00226.31 ORF64214 - 0.073 13.2 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 DnaJ domain NUDIX PF00293.28 ORF54713 - 6.8e-14 52.0 0.0 1.1e-13 51.3 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain tRNA_anti-codon PF01336.25 ORF54713 - 2.4e-09 37.0 0.2 4.8e-09 36.1 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Insulin_TMD PF17870.1 ORF43602 - 0.047 13.8 0.6 0.047 13.8 0.6 2.7 3 0 0 3 3 3 0 Insulin receptor trans-membrane segment DUF4690 PF15756.5 ORF43602 - 0.18 12.4 2.2 0.23 12.1 0.4 2.1 2 0 0 2 2 2 0 Small Novel Rich in Cartilage DUF4690 PF15756.5 ORF36744 - 0.00052 20.6 0.7 0.0015 19.1 0.7 1.7 1 0 0 1 1 1 1 Small Novel Rich in Cartilage NUDIX PF00293.28 ORF34596 - 6.8e-14 52.0 0.0 1.1e-13 51.3 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain tRNA_anti-codon PF01336.25 ORF34596 - 2.4e-09 37.0 0.2 4.8e-09 36.1 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF3394 PF11874.8 ORF3393 - 0.98 9.1 2.7 2.8 7.6 2.7 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3394) Filament PF00038.21 ORF3393 - 1 8.9 49.5 1.5 8.4 19.1 2.9 2 1 0 2 2 2 0 Intermediate filament protein Laminin_G_3 PF13385.6 ORF25368 - 3.7e-06 27.2 0.3 8.9e-06 25.9 0.3 1.6 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily ABC_tran PF00005.27 ORF23168 - 1.3e-16 61.4 0.1 4.4e-11 43.4 0.0 3.2 2 1 0 2 2 2 2 ABC transporter SMC_N PF02463.19 ORF23168 - 7e-09 35.4 0.0 0.015 14.7 0.0 3.1 3 0 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF23168 - 0.00024 20.8 0.5 0.00055 19.6 0.1 1.9 2 0 0 2 2 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 ORF23168 - 0.00029 20.8 1.1 0.6 9.9 0.0 3.0 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system DnaJ_CXXCXGXG PF00684.19 ORF23168 - 0.0031 17.8 0.2 0.007 16.7 0.2 1.5 1 0 0 1 1 1 1 DnaJ central domain AAA_16 PF13191.6 ORF23168 - 0.0056 17.1 0.1 0.07 13.5 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF23168 - 0.0079 16.1 0.0 0.015 15.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase cobW PF02492.19 ORF23168 - 0.031 13.9 0.1 0.064 12.8 0.1 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF23168 - 0.062 13.6 0.9 0.61 10.4 0.1 2.6 3 0 0 3 3 3 0 AAA domain Viral_helicase1 PF01443.18 ORF23168 - 0.091 12.5 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_23 PF13476.6 ORF23168 - 0.097 13.2 0.5 0.21 12.0 0.5 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF23168 - 0.098 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_30 PF13604.6 ORF23168 - 0.11 12.2 0.1 4.1 7.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 ORF23168 - 0.17 12.2 0.4 18 5.6 0.0 2.9 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_2 PF07724.14 ORF16782 - 1.4e-31 109.9 0.0 2.9e-31 108.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 ORF16782 - 2.6e-13 50.6 0.0 6.5e-13 49.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 ORF16782 - 2e-07 30.9 0.7 1.1e-05 25.4 0.2 2.5 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA_16 PF13191.6 ORF16782 - 4.7e-05 23.8 0.2 0.0013 19.1 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_24 PF13479.6 ORF16782 - 0.00018 21.3 0.0 0.00045 20.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain MCM PF00493.23 ORF16782 - 0.0002 20.6 0.1 0.00089 18.4 0.0 1.9 2 0 0 2 2 2 1 MCM P-loop domain AAA_22 PF13401.6 ORF16782 - 0.00042 20.6 0.2 0.0026 18.0 0.1 2.4 2 1 0 2 2 2 1 AAA domain T2SSE PF00437.20 ORF16782 - 0.0013 17.9 0.0 0.0027 16.8 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein TsaE PF02367.17 ORF16782 - 0.0031 17.5 0.0 0.019 15.0 0.0 2.1 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_5 PF07728.14 ORF16782 - 0.0032 17.5 0.1 0.0081 16.2 0.1 1.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 ORF16782 - 0.0091 16.0 0.0 0.019 15.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.7 ORF16782 - 0.016 14.2 0.1 0.038 12.9 0.0 1.6 2 0 0 2 2 2 0 AAA-like domain AAA_18 PF13238.6 ORF16782 - 0.018 15.6 0.1 0.047 14.2 0.1 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF16782 - 0.02 14.6 0.0 0.24 11.1 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain FtsK_SpoIIIE PF01580.18 ORF16782 - 0.033 13.6 0.0 0.076 12.4 0.0 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family TniB PF05621.11 ORF16782 - 0.034 13.5 0.0 0.66 9.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein AAA_17 PF13207.6 ORF16782 - 0.035 14.5 0.7 13 6.2 0.1 3.0 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 ORF16782 - 0.035 13.5 0.1 0.12 11.7 0.1 1.9 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 ORF16782 - 0.037 13.8 0.0 0.091 12.5 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_3 PF07726.11 ORF16782 - 0.038 13.8 0.0 0.78 9.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 ORF16782 - 0.041 13.8 0.0 0.098 12.6 0.0 1.6 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_33 PF13671.6 ORF16782 - 0.056 13.6 0.0 0.18 12.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 ORF16782 - 0.069 12.6 0.1 0.92 8.9 0.1 2.3 2 0 0 2 2 2 0 PhoH-like protein TIP49 PF06068.13 ORF16782 - 0.072 12.3 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain dNK PF01712.19 ORF16782 - 0.078 12.8 0.0 0.2 11.5 0.0 1.7 1 0 0 1 1 1 0 Deoxynucleoside kinase AAA_28 PF13521.6 ORF16782 - 0.092 13.0 0.5 0.23 11.7 0.0 1.9 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 ORF16782 - 0.094 12.6 0.1 0.29 11.0 0.0 1.8 2 0 0 2 2 1 0 NACHT domain Ret2_MD PF18528.1 ORF16782 - 0.099 13.0 0.6 0.78 10.2 0.3 2.5 2 0 0 2 2 2 0 RNA editing 3' terminal uridylyl transferase 2 middle domain ResIII PF04851.15 ORF16782 - 0.12 12.4 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit RuvB_N PF05496.12 ORF16782 - 0.14 11.9 0.0 0.43 10.3 0.0 1.8 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_29 PF13555.6 ORF16782 - 0.15 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF87 PF01935.17 ORF16782 - 0.15 12.1 0.1 0.66 10.0 0.0 2.0 2 1 0 2 2 2 0 Helicase HerA, central domain AAA_23 PF13476.6 ORF16782 - 0.19 12.2 0.1 0.19 12.2 0.1 1.7 2 1 0 2 2 1 0 AAA domain Glyco_hydro_3_C PF01915.22 ORF142669 - 2.1e-32 112.7 0.0 3e-32 112.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 ORF142669 - 8.2e-22 77.1 0.0 1.9e-21 75.9 0.0 1.7 1 0 0 1 1 1 1 Fibronectin type III-like domain Peptidase_M24 PF00557.24 ORF138204 - 1.1e-35 123.3 0.2 8.5e-35 120.3 0.2 2.0 1 1 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N_2 PF16189.5 ORF138204 - 9.2e-34 116.9 1.6 1.8e-33 115.9 0.9 1.8 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain Peptidase_M24_C PF16188.5 ORF138204 - 1.3e-18 66.8 2.5 2e-18 66.2 0.6 2.5 2 0 0 2 2 2 1 C-terminal region of peptidase_M24 His_Phos_2 PF00328.22 ORF137764 - 2.8e-14 53.3 4.9 1.4e-13 51.0 4.8 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) MORN PF02493.20 ORF136676 - 3.6e-30 102.0 38.6 3.3e-06 26.7 1.0 9.0 9 0 0 9 9 9 7 MORN repeat NUDIX PF00293.28 ORF126407 - 6.8e-14 52.0 0.0 1.1e-13 51.3 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain tRNA_anti-codon PF01336.25 ORF126407 - 2.4e-09 37.0 0.2 4.8e-09 36.1 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Pkinase PF00069.25 ORF125056 - 3e-69 233.3 0.3 5.6e-69 232.4 0.3 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF125056 - 8.6e-40 136.7 0.0 1.4e-39 136.0 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF125056 - 2.9e-09 36.7 0.0 5.2e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF125056 - 3.7e-05 22.9 0.6 3.7e-05 22.9 0.6 1.7 2 0 0 2 2 2 1 Haspin like kinase domain Kdo PF06293.14 ORF125056 - 0.0058 16.0 0.4 0.013 14.9 0.4 1.6 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF125056 - 0.0097 14.7 1.6 0.028 13.2 0.2 2.2 2 1 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF125056 - 0.038 13.9 0.0 0.64 9.9 0.2 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF125056 - 0.35 10.5 3.4 0.31 10.6 0.1 2.5 2 1 1 3 3 3 0 Kinetochore Sim4 complex subunit FTA2 Sugar_tr PF00083.24 ORF124168 - 9.5e-52 176.3 34.6 1.6e-50 172.3 34.6 2.0 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF124168 - 8.1e-21 74.3 23.0 1.5e-20 73.4 22.9 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily WTF PF03303.13 ORF124168 - 6.1 6.5 21.9 0.11 12.2 3.3 2.6 3 0 0 3 3 3 0 WTF protein Cpn60_TCP1 PF00118.24 ORF123299 - 3.1e-153 510.9 9.4 3.5e-153 510.8 9.4 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family MFS_1 PF07690.16 ORF119248 - 1.7e-25 89.7 17.4 1.7e-25 89.7 17.4 1.4 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF119248 - 5.5e-12 45.3 24.7 1.3e-11 44.0 24.7 1.7 1 1 0 1 1 1 1 Sugar (and other) transporter RPAP1_N PF08621.10 ORF119248 - 0.018 14.8 0.0 0.03 14.1 0.0 1.3 1 0 0 1 1 1 0 RPAP1-like, N-terminal Renin_r PF07850.14 ORF119248 - 0.081 13.5 0.0 0.081 13.5 0.0 2.6 3 0 0 3 3 3 0 Renin receptor-like protein PK PF00224.21 ORF106104 - 6.4e-147 489.0 0.4 9.7e-147 488.4 0.4 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF106104 - 6.1e-25 87.7 0.5 1.6e-24 86.4 0.3 1.9 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF106104 - 0.019 14.1 0.1 0.044 12.9 0.1 1.7 1 1 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family DeoRC PF00455.22 ORF106104 - 0.036 14.0 0.1 14 5.5 0.0 2.6 2 1 0 2 2 2 0 DeoR C terminal sensor domain WD40 PF00400.32 ORF92137 - 0.071 14.0 0.1 20 6.3 0.0 4.2 4 0 0 4 4 4 0 WD domain, G-beta repeat RCC1_2 PF13540.6 ORF84969 - 1.8e-18 65.8 19.3 0.43 10.5 0.0 10.4 10 0 0 10 10 10 9 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF84969 - 0.00038 20.6 9.9 33 4.5 0.0 7.9 5 2 1 6 6 6 2 Uncharacterised ACR, YagE family COG1723 FtsQ PF03799.15 ORF84969 - 0.0018 19.1 2.0 25 5.7 0.1 5.6 1 1 5 6 6 6 1 Cell division protein FtsQ Aa_trans PF01490.18 ORF83271 - 1.2e-60 205.4 30.8 1.4e-60 205.2 30.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein BAR PF03114.18 ORF7647 - 0.072 12.7 3.5 2.6 7.6 0.3 2.3 2 0 0 2 2 2 0 BAR domain MFS_1 PF07690.16 ORF71636 - 1.7e-15 56.8 20.3 2.7e-15 56.2 20.3 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Ammonium_transp PF00909.21 ORF69952 - 2.8e-101 339.1 36.5 3.2e-101 338.9 36.5 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family DUF2275 PF10039.9 ORF69952 - 0.046 13.8 0.3 0.11 12.6 0.0 1.7 2 0 0 2 2 2 0 Predicted integral membrane protein (DUF2275) DUF2749 PF10907.8 ORF69952 - 0.74 10.0 7.1 2.2 8.5 2.6 3.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) DUF1010 PF06231.11 ORF69952 - 5.8 7.5 8.4 8.4 7.0 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1010) Arabinose_Isome PF02610.15 ORF66109 - 6.5e-180 598.0 0.2 7.9e-180 597.7 0.2 1.1 1 0 0 1 1 1 1 L-arabinose isomerase Arabinose_Iso_C PF11762.8 ORF66109 - 3.3e-46 155.8 0.0 1.1e-45 154.1 0.0 1.9 2 0 0 2 2 2 1 L-arabinose isomerase C-terminal domain PaRep2a PF07903.11 ORF66109 - 0.083 12.7 0.1 0.78 9.6 0.1 2.2 2 0 0 2 2 2 0 PaRep2a protein Helicase_C PF00271.31 ORF63997 - 2.8e-21 75.9 1.4 7.3e-21 74.6 0.0 2.4 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF63997 - 2e-16 60.3 0.0 6.3e-16 58.6 0.0 1.9 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF853 PF05872.12 ORF61648 - 9.9e-252 835.9 0.2 1.1e-251 835.8 0.2 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.9 ORF61648 - 6.6e-07 28.6 0.1 0.00013 21.0 0.1 2.2 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_10 PF12846.7 ORF61648 - 1.6e-06 27.3 0.0 0.0022 17.0 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 ORF61648 - 2e-06 28.1 0.2 0.0012 19.2 0.1 2.5 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.17 ORF61648 - 3.6e-06 27.3 0.0 6.4e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain ResIII PF04851.15 ORF61648 - 5.6e-06 26.5 0.1 0.0042 17.1 0.1 2.4 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit FtsK_SpoIIIE PF01580.18 ORF61648 - 0.00017 21.0 0.1 0.0006 19.2 0.0 1.8 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_16 PF13191.6 ORF61648 - 0.00022 21.6 1.5 0.0073 16.7 1.0 2.6 1 1 0 1 1 1 1 AAA ATPase domain DUF2075 PF09848.9 ORF61648 - 0.00056 19.3 0.6 0.16 11.2 0.2 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 ORF61648 - 0.00084 19.8 0.0 0.3 11.5 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 ORF61648 - 0.0013 18.5 0.3 0.0039 16.9 0.2 1.8 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF61648 - 0.0056 16.2 0.1 0.01 15.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region CbiA PF01656.23 ORF61648 - 0.0065 16.5 0.0 0.01 15.9 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zot PF05707.12 ORF61648 - 0.008 15.8 0.0 0.048 13.3 0.0 2.0 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_28 PF13521.6 ORF61648 - 0.012 15.8 0.4 0.028 14.7 0.4 1.5 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 ORF61648 - 0.019 15.3 0.1 0.05 13.9 0.1 1.6 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 ORF61648 - 0.03 13.4 0.1 0.057 12.5 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein SRP54 PF00448.22 ORF61648 - 0.032 13.9 0.1 0.071 12.7 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 ORF61648 - 0.034 14.0 0.2 0.076 12.9 0.2 1.5 1 0 0 1 1 1 0 NTPase AAA_18 PF13238.6 ORF61648 - 0.065 13.8 0.0 0.18 12.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_6 PF12774.7 ORF61648 - 0.074 12.0 0.2 0.14 11.1 0.2 1.4 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region AAA_25 PF13481.6 ORF61648 - 0.083 12.5 0.1 0.27 10.8 0.1 1.9 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 ORF61648 - 0.099 12.6 0.1 11 5.8 0.0 2.4 2 0 0 2 2 2 0 Rad17 P-loop domain HTH_41 PF14502.6 ORF61648 - 0.12 12.0 0.2 0.48 10.2 0.0 2.2 2 0 0 2 2 1 0 Helix-turn-helix domain NACHT PF05729.12 ORF61648 - 0.77 9.7 2.5 0.49 10.3 0.1 1.9 3 0 0 3 3 2 0 NACHT domain Ion_trans_2 PF07885.16 ORF47507 - 6.1e-12 45.3 1.3 1.9e-11 43.8 1.3 1.8 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF47507 - 1.8e-05 24.1 15.9 4e-05 23.0 15.9 1.6 1 1 0 1 1 1 1 Ion transport protein Ank_2 PF12796.7 ORF40334 - 9.9e-14 51.7 0.1 0.00039 20.9 0.0 3.7 3 0 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF40334 - 7.6e-13 48.7 0.3 0.0016 19.0 0.0 6.2 3 2 3 6 6 6 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF40334 - 9.3e-13 48.1 2.3 0.00039 20.6 0.0 4.6 4 0 0 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF40334 - 6.4e-11 42.2 6.8 2e-05 24.8 0.0 5.0 5 0 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF40334 - 5e-10 38.7 1.4 0.0008 19.7 0.0 6.5 6 0 0 6 6 6 1 Ankyrin repeat TPR_2 PF07719.17 ORF25859 - 6.9e-25 85.1 6.4 4.6e-05 23.2 0.0 8.7 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_1 PF00515.28 ORF25859 - 1e-21 75.8 8.7 1.5e-06 27.8 0.1 8.2 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_12 PF13424.6 ORF25859 - 2.3e-20 72.6 8.0 2.1e-05 24.7 0.0 7.4 5 2 2 7 7 7 5 Tetratricopeptide repeat TPR_8 PF13181.6 ORF25859 - 4e-18 64.1 4.2 0.032 14.5 0.0 8.3 9 0 0 9 9 9 4 Tetratricopeptide repeat TPR_14 PF13428.6 ORF25859 - 3.2e-14 52.4 0.4 1.1 10.3 0.0 7.6 5 2 4 9 9 9 3 Tetratricopeptide repeat TPR_17 PF13431.6 ORF25859 - 1e-11 44.4 0.9 0.0015 18.7 0.0 6.6 8 0 0 8 8 7 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF25859 - 9e-10 38.9 0.4 0.74 10.4 0.0 5.9 3 1 2 7 7 7 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF25859 - 1.3e-08 35.4 0.0 0.016 15.8 0.0 4.7 3 1 2 5 5 5 3 Tetratricopeptide repeat TPR_9 PF13371.6 ORF25859 - 1.7e-06 28.1 0.0 0.22 11.7 0.0 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF25859 - 1.7e-05 25.0 13.0 0.0036 17.5 0.5 5.3 4 2 2 6 6 6 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 ORF25859 - 4.7e-05 23.7 5.9 20 6.1 0.0 7.3 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF25859 - 6.3e-05 22.7 8.9 0.021 14.8 0.1 5.8 7 0 0 7 7 7 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF25859 - 0.00068 19.7 1.7 5.2 7.2 0.1 4.7 5 0 0 5 5 5 1 Fis1 C-terminal tetratricopeptide repeat TPR_11 PF13414.6 ORF25859 - 0.0045 16.7 3.2 0.5 10.1 0.0 4.7 4 1 1 5 5 5 1 TPR repeat TPR_10 PF13374.6 ORF25859 - 0.0055 16.5 7.0 7.5 6.6 0.4 6.0 7 0 0 7 7 6 1 Tetratricopeptide repeat ChAPs PF09295.10 ORF25859 - 0.049 12.6 0.8 6.8 5.6 0.1 2.9 2 1 2 4 4 4 0 ChAPs (Chs5p-Arf1p-binding proteins) Foamy_BEL PF03274.14 ORF25859 - 0.05 12.9 0.0 0.079 12.3 0.0 1.3 1 0 0 1 1 1 0 Foamy virus BEL 1/2 protein HisKA_3 PF07730.13 ORF147022 - 1.5e-14 54.3 2.7 1.5e-14 54.3 2.7 2.5 2 0 0 2 2 2 1 Histidine kinase MASE1 PF05231.14 ORF147022 - 2.7e-14 53.0 45.4 8e-14 51.5 45.4 1.9 1 1 0 1 1 1 1 MASE1 HATPase_c PF02518.26 ORF147022 - 9.5e-07 29.3 0.2 4.6e-06 27.1 0.2 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF147022 - 0.068 13.1 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain GIT_CC PF16559.5 ORF147022 - 0.079 12.8 1.3 0.66 9.9 0.8 2.2 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF3431 PF11913.8 ORF145222 - 0.00051 19.9 2.1 0.11 12.3 0.1 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF3431) Pox_D5 PF03288.16 ORF135421 - 0.041 14.4 2.7 2 9.0 0.0 3.3 3 0 0 3 3 3 0 Poxvirus D5 protein-like PK PF00224.21 ORF133933 - 6.4e-147 489.0 0.4 9.6e-147 488.4 0.4 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 ORF133933 - 6e-25 87.7 0.5 1.6e-24 86.4 0.3 1.9 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 ORF133933 - 0.019 14.1 0.1 0.044 12.9 0.1 1.7 1 1 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family DeoRC PF00455.22 ORF133933 - 0.036 14.0 0.1 14 5.5 0.0 2.6 2 1 0 2 2 2 0 DeoR C terminal sensor domain bVLRF1 PF18826.1 ORF11373 - 1.1e-39 135.6 0.0 1.1e-39 135.6 0.0 1.6 2 0 0 2 2 1 1 bacteroidetes VLRF1 release factor VATC PF18716.1 ORF11373 - 2.5e-10 40.0 1.6 5.3e-10 39.0 1.6 1.5 1 0 0 1 1 1 1 Vms1-associating treble clef domain acVLRF1 PF18859.1 ORF11373 - 0.018 15.3 1.0 0.092 13.0 1.0 2.3 1 1 0 1 1 1 0 Actinobacteria/chloroflexi VLRF1 release factor Eapp_C PF10238.9 ORF11373 - 0.019 15.0 10.0 0.025 14.7 8.9 1.7 2 0 0 2 2 1 0 E2F-associated phosphoprotein Rrn6 PF10214.9 ORF11373 - 0.054 12.0 5.1 0.076 11.5 5.1 1.2 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Metallothio_Pro PF02069.16 ORF11373 - 0.11 12.8 0.4 0.26 11.5 0.4 1.6 1 0 0 1 1 1 0 Prokaryotic metallothionein zf-MYND PF01753.18 ORF11373 - 0.12 12.5 4.7 0.058 13.5 1.3 2.2 2 0 0 2 2 2 0 MYND finger Cas_Csy4 PF09618.10 ORF11373 - 0.57 10.3 6.2 11 6.1 0.0 2.3 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_Csy4) AP3D1 PF06375.11 ORF11373 - 1.1 9.4 16.3 4 7.7 16.3 1.9 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 CDC45 PF02724.14 ORF11373 - 1.4 7.2 10.7 2 6.6 10.7 1.2 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 ORF11373 - 1.5 8.6 14.1 3 7.6 14.1 1.5 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 NARP1 PF12569.8 ORF11373 - 1.8 7.4 15.0 4 6.2 12.1 2.1 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 Nucleo_P87 PF07267.11 ORF11373 - 2 7.2 12.4 3.6 6.3 12.4 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Connexin PF00029.19 ORF11373 - 2 8.1 6.6 3.4 7.4 6.6 1.3 1 0 0 1 1 1 0 Connexin PBP_sp32 PF07222.12 ORF11373 - 3 7.2 12.0 5.8 6.3 12.0 1.4 1 0 0 1 1 1 0 Proacrosin binding protein sp32 TMEM214 PF10151.9 ORF11373 - 3.3 6.0 7.9 6.3 5.1 7.9 1.4 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator NPR3 PF03666.13 ORF11373 - 3.6 6.3 7.9 5.3 5.7 7.9 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF1682 PF07946.14 ORF11373 - 4.2 6.5 18.9 6.7 5.8 18.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Presenilin PF01080.17 ORF11373 - 6.3 5.5 9.7 9.1 4.9 9.7 1.2 1 0 0 1 1 1 0 Presenilin U79_P34 PF03064.16 ORF11373 - 6.3 6.1 15.2 11 5.3 15.2 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Arabinose_Isome PF02610.15 ORF107729 - 6.5e-180 598.0 0.2 7.9e-180 597.7 0.2 1.1 1 0 0 1 1 1 1 L-arabinose isomerase Arabinose_Iso_C PF11762.8 ORF107729 - 3.3e-46 155.8 0.0 1.1e-45 154.1 0.0 1.9 2 0 0 2 2 2 1 L-arabinose isomerase C-terminal domain PaRep2a PF07903.11 ORF107729 - 0.083 12.7 0.1 0.78 9.6 0.1 2.2 2 0 0 2 2 2 0 PaRep2a protein XG_FTase PF03254.13 ORF101809 - 0.099 11.2 0.0 0.16 10.6 0.0 1.2 1 0 0 1 1 1 0 Xyloglucan fucosyltransferase HA2 PF04408.23 ORF9614 - 2.5e-14 53.5 0.0 5.1e-14 52.5 0.0 1.5 1 0 0 1 1 1 1 Helicase associated domain (HA2) PHO4 PF01384.20 ORF94386 - 2.8e-88 296.2 16.9 3.4e-88 295.9 16.9 1.1 1 0 0 1 1 1 1 Phosphate transporter family Myc_target_1 PF15179.6 ORF94386 - 0.0018 18.2 1.2 0.049 13.5 0.0 2.4 2 0 0 2 2 2 1 Myc target protein 1 Svf1_C PF17187.4 ORF90017 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF90017 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF90017 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF90017 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) Svf1_C PF17187.4 ORF88884 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF88884 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF88884 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF88884 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) RAP PF08373.10 ORF85556 - 6.5e-06 26.2 0.0 1.1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 RAP domain IKBKB_SDD PF18397.1 ORF85556 - 0.081 12.2 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 IQBAL scaffold dimerization domain MatE PF01554.18 ORF74845 - 4.5e-40 136.9 24.9 1.5e-20 73.5 8.8 2.3 2 0 0 2 2 2 2 MatE PHO4 PF01384.20 ORF74407 - 3.6e-88 295.9 19.7 4.2e-88 295.6 19.7 1.0 1 0 0 1 1 1 1 Phosphate transporter family Myc_target_1 PF15179.6 ORF74407 - 0.013 15.4 1.1 0.4 10.5 0.0 2.5 2 0 0 2 2 2 0 Myc target protein 1 Apolipoprotein PF01442.18 ORF65959 - 5.9e-06 26.3 0.0 1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain Svf1_C PF17187.4 ORF62787 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF62787 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF62787 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF62787 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) Svf1_C PF17187.4 ORF60375 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF60375 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF60375 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF60375 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) Svf1_C PF17187.4 ORF42431 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF42431 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF42431 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF42431 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) Pyridoxal_deC PF00282.19 ORF39551 - 1.9e-45 155.2 0.0 2.7e-45 154.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain DegT_DnrJ_EryC1 PF01041.17 ORF39551 - 0.12 11.7 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Svf1_C PF17187.4 ORF29338 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF29338 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF29338 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF29338 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) Radical_SAM PF04055.21 ORF152425 - 2.2e-19 70.5 0.0 3.7e-19 69.7 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily HemN_C PF06969.16 ORF152425 - 2e-06 27.8 0.0 5e-06 26.5 0.0 1.7 2 0 0 2 2 2 1 HemN C-terminal domain Fer4_14 PF13394.6 ORF152425 - 0.016 15.4 0.0 0.029 14.5 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain Svf1_C PF17187.4 ORF152208 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF152208 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF152208 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF152208 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) Insulin_TMD PF17870.1 ORF149446 - 0.047 13.8 0.6 0.047 13.8 0.6 2.7 3 0 0 3 3 3 0 Insulin receptor trans-membrane segment DUF4690 PF15756.5 ORF149446 - 0.18 12.4 2.2 0.23 12.1 0.4 2.1 2 0 0 2 2 2 0 Small Novel Rich in Cartilage Svf1_C PF17187.4 ORF1493 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF1493 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF1493 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF1493 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) Svf1_C PF17187.4 ORF145156 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF145156 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF145156 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF145156 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) Pkinase PF00069.25 ORF144627 - 6.4e-63 212.6 1.9 9.7e-63 212.0 1.9 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF144627 - 1.9e-46 158.4 0.2 2.9e-46 157.9 0.2 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF144627 - 5.3e-07 29.2 0.0 1.6e-06 27.7 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF144627 - 1.4e-05 24.1 1.0 0.00014 20.8 0.1 2.1 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF144627 - 0.015 14.7 0.1 0.025 13.9 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family p450 PF00067.22 ORF135116 - 7e-45 153.6 0.7 9.7e-45 153.2 0.7 1.2 1 0 0 1 1 1 1 Cytochrome P450 Svf1_C PF17187.4 ORF129371 - 0.00026 20.9 0.0 0.83 9.5 0.0 2.5 2 0 0 2 2 2 2 Svf1-like C-terminal lipocalin-like domain DUF2617 PF10936.8 ORF129371 - 0.0033 17.5 0.4 24 4.9 0.0 3.9 4 0 0 4 4 4 2 Protein of unknown function DUF2617 Glyco_hydro_43 PF04616.14 ORF129371 - 0.0078 15.6 0.1 4.3 6.6 0.0 2.3 2 0 0 2 2 2 2 Glycosyl hydrolases family 43 DUF4280 PF14107.6 ORF129371 - 0.014 16.2 0.4 11 6.9 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4280) p450 PF00067.22 ORF121966 - 7e-49 166.8 2.0 1e-48 166.3 2.0 1.3 1 0 0 1 1 1 1 Cytochrome P450 KH_1 PF00013.29 ORF119503 - 9.8e-14 50.9 0.0 2.1e-13 49.9 0.0 1.6 1 0 0 1 1 1 1 KH domain zf-met PF12874.7 ORF119503 - 0.01 16.2 0.2 0.036 14.5 0.2 2.0 1 0 0 1 1 1 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF119503 - 0.018 15.3 0.6 0.065 13.5 0.0 2.3 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding KH_2 PF07650.17 ORF119503 - 0.026 14.3 0.0 0.052 13.4 0.0 1.4 1 0 0 1 1 1 0 KH domain YdjO PF14169.6 ORF119503 - 1.1 9.1 5.5 0.41 10.4 0.2 2.7 3 0 0 3 3 3 0 Cold-inducible protein YdjO MatE PF01554.18 ORF119053 - 7.6e-40 136.2 25.1 2.6e-20 72.7 9.0 2.3 2 0 0 2 2 2 2 MatE Kelch_1 PF01344.25 ORF108424 - 3.1e-19 68.3 5.6 4.5e-06 26.2 0.0 5.3 5 0 0 5 5 5 4 Kelch motif Kelch_4 PF13418.6 ORF108424 - 5.1e-19 68.0 5.2 4.9e-06 26.5 0.1 5.5 5 0 0 5 5 5 5 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF108424 - 8.2e-19 67.2 4.8 1e-05 25.6 0.0 5.3 4 1 1 5 5 5 4 Kelch motif Kelch_3 PF13415.6 ORF108424 - 1.2e-10 41.4 2.6 1.2e-06 28.6 0.0 4.4 4 0 0 4 4 4 1 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF108424 - 2.4e-09 37.0 0.5 0.027 14.5 0.0 4.6 5 0 0 5 5 4 2 Kelch motif zf-B_box PF00643.24 ORF108424 - 8.6e-09 35.4 2.0 1.7e-08 34.5 2.0 1.5 1 0 0 1 1 1 1 B-box zinc finger Laminin_II PF06009.12 ORF108424 - 0.012 15.6 3.1 1.3 9.0 0.1 2.5 2 0 0 2 2 2 0 Laminin Domain II DUF4736 PF15883.5 ORF108424 - 0.014 15.2 0.7 0.026 14.3 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) NPV_P10 PF05531.12 ORF108424 - 0.014 15.8 1.8 0.89 10.1 0.3 2.5 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Spc7 PF08317.11 ORF108424 - 0.21 10.4 8.1 0.19 10.6 2.9 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF3287 PF11690.8 ORF108424 - 0.26 11.0 1.6 1.4 8.6 0.1 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3287) TssO PF17561.2 ORF108424 - 0.31 11.1 17.7 0.023 14.8 4.7 2.7 2 1 0 3 3 2 0 Type VI secretion system, TssO BAG PF02179.16 ORF108424 - 0.81 10.2 6.4 1.8 9.1 2.9 2.9 2 1 0 2 2 2 0 BAG domain DUF1664 PF07889.12 ORF108424 - 1.2 9.2 5.6 16 5.6 0.3 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF848 PF05852.11 ORF108424 - 1.7 8.7 8.8 3.6 7.7 1.8 2.5 1 1 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) YtxH PF12732.7 ORF108424 - 3.3 8.3 4.6 3 8.4 0.9 2.6 2 1 0 2 2 2 0 YtxH-like protein XhlA PF10779.9 ORF108424 - 6.4 7.1 6.9 34 4.7 1.4 2.9 2 0 0 2 2 2 0 Haemolysin XhlA Aldedh PF00171.22 ORF97351 - 9.3e-79 265.1 0.1 1.1e-78 264.9 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Interferon PF00143.19 ORF97351 - 0.061 13.5 1.3 0.11 12.7 1.3 1.4 1 0 0 1 1 1 0 Interferon alpha/beta domain Cytochrom_B562 PF07361.11 ORF97351 - 0.14 12.8 2.2 0.16 12.6 0.4 2.1 2 0 0 2 2 2 0 Cytochrome b562 Spore_YpjB PF09577.10 ORF97351 - 0.18 11.6 1.6 0.4 10.4 1.6 1.6 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) ABC_membrane PF00664.23 ORF94668 - 4.1e-27 95.5 3.3 5.2e-27 95.2 3.3 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF94668 - 5.4e-27 95.0 0.0 1.4e-26 93.6 0.0 1.7 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF94668 - 4.7e-07 29.5 0.1 0.00014 21.4 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF94668 - 0.00022 21.2 0.7 0.63 9.8 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF94668 - 0.0049 16.9 0.0 0.018 15.1 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase DUF87 PF01935.17 ORF94668 - 0.015 15.4 0.0 0.036 14.2 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_24 PF13479.6 ORF94668 - 0.025 14.3 0.1 0.088 12.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF4051 PF13260.6 ORF94668 - 0.04 13.7 0.2 0.09 12.5 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) SbcCD_C PF13558.6 ORF94668 - 0.053 13.8 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 ORF94668 - 0.1 12.9 0.1 0.56 10.5 0.1 2.1 1 1 0 1 1 1 0 AAA domain CENP-O PF09496.10 ORF94668 - 0.1 12.5 0.0 1.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Cenp-O kinetochore centromere component DUF4332 PF14229.6 ORF94668 - 0.15 12.3 0.7 6.4 7.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4332) DUF21 PF01595.20 ORF9232 - 3.5e-26 92.0 0.6 5.7e-26 91.3 0.6 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain YrhC PF14143.6 ORF9232 - 0.069 13.2 4.8 0.047 13.8 2.5 1.9 2 0 0 2 2 2 0 YrhC-like protein CBS PF00571.28 ORF9232 - 0.11 13.0 0.4 22 5.6 0.1 3.0 2 1 0 2 2 2 0 CBS domain NOG1_N PF17835.1 ORF86353 - 0.012 15.6 4.7 0.012 15.6 4.7 2.0 2 0 0 2 2 2 0 NOG1 N-terminal helical domain MAS20 PF02064.15 ORF86353 - 0.043 13.9 1.0 0.13 12.4 1.0 1.8 1 0 0 1 1 1 0 MAS20 protein import receptor Zn_ribbon_2 PF12674.7 ORF86353 - 0.25 12.0 5.1 17 6.1 0.1 3.4 3 0 0 3 3 3 0 Putative zinc ribbon domain FACT-Spt16_Nlob PF14826.6 ORF86353 - 2.3 8.0 10.6 5.3 6.8 2.4 3.4 3 0 0 3 3 3 0 FACT complex subunit SPT16 N-terminal lobe domain DSPc PF00782.20 ORF68795 - 5.7e-08 32.7 0.0 1.5e-07 31.3 0.0 1.7 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 ORF68795 - 1.1e-07 32.1 0.2 8e-07 29.3 0.0 2.2 2 0 0 2 2 2 1 Inositol hexakisphosphate Y_phosphatase PF00102.27 ORF68795 - 0.00027 20.6 0.0 0.00052 19.6 0.0 1.4 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DUF442 PF04273.13 ORF68795 - 0.00074 19.6 1.0 0.0036 17.4 0.0 2.6 3 0 0 3 3 3 1 Putative phosphatase (DUF442) ABC_membrane PF00664.23 ORF64562 - 4.1e-27 95.5 3.3 5.2e-27 95.2 3.3 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF64562 - 5.4e-27 95.0 0.0 1.4e-26 93.6 0.0 1.7 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF64562 - 4.7e-07 29.5 0.1 0.00014 21.4 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF64562 - 0.00022 21.2 0.7 0.63 9.8 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF64562 - 0.0049 16.9 0.0 0.018 15.1 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase DUF87 PF01935.17 ORF64562 - 0.015 15.4 0.0 0.036 14.2 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_24 PF13479.6 ORF64562 - 0.025 14.3 0.1 0.088 12.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF4051 PF13260.6 ORF64562 - 0.04 13.7 0.2 0.09 12.5 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) SbcCD_C PF13558.6 ORF64562 - 0.053 13.8 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 ORF64562 - 0.1 12.9 0.1 0.56 10.5 0.1 2.1 1 1 0 1 1 1 0 AAA domain CENP-O PF09496.10 ORF64562 - 0.1 12.5 0.0 1.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Cenp-O kinetochore centromere component DUF4332 PF14229.6 ORF64562 - 0.15 12.3 0.7 6.4 7.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4332) DNA_meth_N PF18284.1 ORF60864 - 0.045 13.6 1.4 11 6.0 0.0 2.7 2 0 0 2 2 2 0 DNA methylase N-terminal domain UBA_4 PF14555.6 ORF59595 - 1.2e-08 34.6 0.3 2.6e-08 33.6 0.3 1.5 1 0 0 1 1 1 1 UBA-like domain UBX PF00789.20 ORF59595 - 7e-07 29.4 0.1 2.3e-06 27.7 0.1 2.0 1 0 0 1 1 1 1 UBX domain Thioredoxin_7 PF13899.6 ORF59595 - 0.021 15.0 0.0 0.063 13.5 0.0 1.8 1 0 0 1 1 1 0 Thioredoxin-like BRAP2 PF07576.12 ORF59595 - 0.14 12.4 3.1 4.8 7.5 0.3 3.0 3 0 0 3 3 3 0 BRCA1-associated protein 2 DUF4407 PF14362.6 ORF57152 - 0.16 11.3 4.8 0.25 10.6 4.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TAF PF02969.17 ORF57152 - 0.48 10.6 2.3 0.88 9.8 0.1 2.5 3 0 0 3 3 3 0 TATA box binding protein associated factor (TAF) LPD5 PF18799.1 ORF57152 - 0.74 10.2 6.6 1.4 9.3 6.2 1.7 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 Exonuc_VII_L PF02601.15 ORF57152 - 1 8.8 6.7 1.6 8.2 6.7 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Pinin_SDK_memA PF04696.13 ORF57152 - 9.3 6.3 15.0 33 4.5 15.0 1.9 1 1 0 1 1 1 0 pinin/SDK/memA/ protein conserved region MFS_1 PF07690.16 ORF49626 - 2.3e-28 99.2 28.0 5.8e-27 94.5 16.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF49626 - 2e-07 30.0 16.8 2e-07 30.0 16.8 2.7 1 1 1 3 3 3 2 MFS/sugar transport protein DUF5010 PF16402.5 ORF49626 - 0.095 11.5 0.1 0.17 10.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5010) DUF4407 PF14362.6 ORF22599 - 0.16 11.3 4.8 0.25 10.6 4.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TAF PF02969.17 ORF22599 - 0.48 10.6 2.3 0.88 9.8 0.1 2.5 3 0 0 3 3 3 0 TATA box binding protein associated factor (TAF) LPD5 PF18799.1 ORF22599 - 0.74 10.2 6.6 1.4 9.3 6.2 1.7 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 Exonuc_VII_L PF02601.15 ORF22599 - 1 8.8 6.7 1.6 8.2 6.7 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Pinin_SDK_memA PF04696.13 ORF22599 - 9.3 6.3 15.0 33 4.5 15.0 1.9 1 1 0 1 1 1 0 pinin/SDK/memA/ protein conserved region 2-oxoacid_dh PF00198.23 ORF15147 - 3.7e-81 272.0 0.3 4.9e-81 271.6 0.3 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 ORF15147 - 2.2e-17 62.7 0.6 5.2e-17 61.4 0.6 1.7 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 ORF15147 - 1.2e-11 44.8 0.2 4.9e-11 42.8 0.1 2.1 2 0 0 2 2 2 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 ORF15147 - 0.00059 19.6 0.1 0.021 14.6 0.0 2.5 1 1 1 2 2 2 1 Biotin-lipoyl like Rho_Binding PF08912.11 ORF15147 - 0.0067 17.2 2.0 0.017 16.0 0.8 2.2 2 0 0 2 2 2 1 Rho Binding DEC-1_N PF04625.13 ORF15147 - 0.053 12.5 12.7 0.081 11.9 12.7 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Peptidase_S10 PF00450.22 ORF144657 - 2.2e-45 155.8 0.2 2.2e-45 155.8 0.2 1.6 2 0 0 2 2 2 1 Serine carboxypeptidase EGF_2 PF07974.13 ORF144657 - 4.4e-05 23.8 15.4 4.4e-05 23.8 15.4 2.3 1 1 1 2 2 2 1 EGF-like domain EGF_Tenascin PF18720.1 ORF144657 - 7.1e-05 22.7 6.6 0.00017 21.5 6.6 1.6 1 0 0 1 1 1 1 Tenascin EGF domain Orf78 PF06024.12 ORF144657 - 0.0036 17.6 0.6 0.0098 16.2 0.6 1.7 1 0 0 1 1 1 1 Orf78 (ac78) RIFIN PF02009.16 ORF144657 - 0.0072 16.3 1.8 0.0072 16.3 1.8 1.9 3 0 0 3 3 3 1 Rifin TssO PF17561.2 ORF144657 - 0.012 15.7 1.9 0.012 15.7 1.9 1.9 2 0 0 2 2 2 0 Type VI secretion system, TssO Baculo_11_kDa PF06143.11 ORF144657 - 0.021 14.4 0.9 0.054 13.1 0.9 1.7 1 0 0 1 1 1 0 Baculovirus 11 kDa family MRAP PF15183.6 ORF144657 - 0.073 13.0 0.1 0.19 11.7 0.1 1.7 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Sigma_reg_N PF13800.6 ORF144657 - 0.073 13.4 1.3 0.19 12.1 1.3 1.6 1 0 0 1 1 1 0 Sigma factor regulator N-terminal SieB PF14163.6 ORF144657 - 0.11 12.0 4.6 0.048 13.2 1.4 1.9 2 0 0 2 2 2 0 Super-infection exclusion protein B DUF4577 PF15145.6 ORF144657 - 0.12 12.4 0.1 0.31 11.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4577) EphA2_TM PF14575.6 ORF144657 - 0.13 13.1 1.9 1.8 9.5 0.2 2.4 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain EGF PF00008.27 ORF144657 - 0.39 11.1 12.6 0.13 12.6 9.5 1.8 2 0 0 2 2 2 0 EGF-like domain EB PF01683.18 ORF144657 - 3.2 8.1 14.3 7.2 7.0 14.3 1.5 1 0 0 1 1 1 0 EB module hEGF PF12661.7 ORF144657 - 7.2 7.4 16.7 0.16 12.7 7.6 2.5 2 0 0 2 2 2 0 Human growth factor-like EGF Aldedh PF00171.22 ORF141145 - 5.9e-79 265.7 0.2 6.7e-79 265.5 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DHR-2 PF06920.13 ORF141145 - 0.044 12.4 0.2 0.076 11.7 0.2 1.2 1 0 0 1 1 1 0 Dock homology region 2 Rad4 PF03835.15 ORF139153 - 0.0072 16.0 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain UCH PF00443.29 ORF138304 - 1.1e-07 31.6 9.5 1.7e-07 31.0 9.5 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF285 PF03382.14 ORF124871 - 0.26 11.1 9.0 1.9 8.3 0.2 3.1 2 1 0 2 2 2 0 Mycoplasma protein of unknown function, DUF285 Aldedh PF00171.22 ORF123864 - 8.8e-79 265.2 0.1 1e-78 265.0 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Interferon PF00143.19 ORF123864 - 0.063 13.5 1.3 0.11 12.7 1.3 1.3 1 0 0 1 1 1 0 Interferon alpha/beta domain Cytochrom_B562 PF07361.11 ORF123864 - 0.17 12.6 2.4 0.16 12.6 0.4 2.0 2 0 0 2 2 2 0 Cytochrome b562 Spore_YpjB PF09577.10 ORF123864 - 0.18 11.6 1.6 0.4 10.4 1.6 1.7 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) Pkinase PF00069.25 ORF114284 - 1.4e-19 70.5 0.6 2.1e-19 69.9 0.6 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF114284 - 1.2e-10 41.2 0.1 2e-10 40.4 0.1 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF114284 - 3.5e-07 29.4 1.0 1.1e-06 27.8 0.2 1.9 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF114284 - 0.00039 20.4 0.1 0.071 13.0 0.2 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Orthopox_F8 PF05886.11 ORF114284 - 0.053 13.7 0.3 0.32 11.1 0.2 2.3 2 0 0 2 2 2 0 Orthopoxvirus F8 protein DUF4033 PF13225.6 ORF114284 - 0.078 13.0 1.0 0.25 11.4 1.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) LptE PF04390.12 ORF107473 - 0.0037 17.9 2.0 0.95 10.2 0.2 2.6 2 0 0 2 2 2 2 Lipopolysaccharide-assembly Hepar_II_III PF07940.13 ORF107473 - 0.012 15.3 0.1 3.5 7.2 0.0 2.2 2 0 0 2 2 2 0 Heparinase II/III-like protein DUF3139 PF11337.8 ORF107473 - 0.024 15.3 0.5 0.088 13.5 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) Tmemb_9 PF05434.11 ORF107473 - 0.027 14.4 0.1 0.07 13.0 0.1 1.7 1 0 0 1 1 1 0 TMEM9 DUF4834 PF16118.5 ORF107473 - 0.058 14.4 0.2 0.32 12.0 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 ORF107473 - 0.087 13.7 0.1 0.54 11.2 0.0 2.3 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Orf78 PF06024.12 ORF107473 - 0.24 11.7 2.2 0.25 11.6 0.2 2.1 2 0 0 2 2 1 0 Orf78 (ac78) Sigma_reg_N PF13800.6 ORF107473 - 0.29 11.5 2.7 0.98 9.7 0.8 2.6 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Ac76 PF05814.11 ORF107473 - 0.49 10.4 7.2 0.53 10.3 0.9 2.8 3 0 0 3 3 3 0 Orf76 (Ac76) DUF4051 PF13260.6 ORF107473 - 1.6 8.5 7.2 0.084 12.6 1.2 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF4051) DUF4581 PF15167.6 ORF107473 - 2.1 8.5 4.8 45 4.2 0.1 3.9 4 1 0 4 4 4 0 Domain of unknown function (DUF4581) DUF4407 PF14362.6 ORF107061 - 0.16 11.3 4.8 0.25 10.6 4.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TAF PF02969.17 ORF107061 - 0.48 10.6 2.3 0.88 9.8 0.1 2.5 3 0 0 3 3 3 0 TATA box binding protein associated factor (TAF) LPD5 PF18799.1 ORF107061 - 0.74 10.2 6.6 1.4 9.3 6.2 1.7 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 5 Exonuc_VII_L PF02601.15 ORF107061 - 1 8.8 6.7 1.6 8.2 6.7 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Pinin_SDK_memA PF04696.13 ORF107061 - 9.3 6.3 15.0 33 4.5 15.0 1.9 1 1 0 1 1 1 0 pinin/SDK/memA/ protein conserved region Aldedh PF00171.22 ORF100996 - 5.9e-79 265.7 0.2 6.7e-79 265.5 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DHR-2 PF06920.13 ORF100996 - 0.044 12.4 0.2 0.076 11.7 0.2 1.2 1 0 0 1 1 1 0 Dock homology region 2 Peptidase_M42 PF05343.14 ORF88570 - 2.6e-101 338.5 0.0 3.1e-101 338.2 0.0 1.1 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 ORF88570 - 0.0092 15.7 0.1 0.032 13.9 0.0 1.8 2 0 0 2 2 2 1 Peptidase family M28 Peptidase_M16_C PF05193.21 ORF81542 - 3.2e-22 79.4 0.0 5.4e-22 78.7 0.0 1.4 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 ORF81542 - 0.013 15.5 0.2 0.026 14.5 0.0 1.6 2 0 0 2 2 2 0 Insulinase (Peptidase family M16) Tubulin_C PF03953.17 ORF65420 - 2.9e-51 172.9 0.2 5.4e-51 172.0 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF65420 - 8.4e-51 173.0 0.0 1.2e-50 172.4 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 ORF65420 - 0.038 13.7 0.0 0.08 12.6 0.0 1.6 1 0 0 1 1 1 0 Tubulin domain Sugar_tr PF00083.24 ORF64676 - 8.4e-102 341.3 20.2 9.6e-102 341.1 20.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF64676 - 1.6e-29 103.0 18.1 1.6e-29 103.0 18.1 2.1 1 1 0 2 2 2 2 Major Facilitator Superfamily Phage_holin_3_2 PF04550.12 ORF64676 - 0.095 13.3 9.6 1.1 9.9 5.6 3.6 3 1 0 3 3 3 0 Phage holin family 2 Ppx-GppA PF02541.16 ORF56703 - 1.5e-103 346.2 0.7 2.6e-103 345.4 0.7 1.4 1 0 0 1 1 1 1 Ppx/GppA phosphatase family DDR PF08841.10 ORF56703 - 0.1 11.5 0.2 0.17 10.8 0.2 1.4 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain HD PF01966.22 ORF56703 - 0.12 12.7 0.0 0.32 11.2 0.0 1.7 2 0 0 2 2 2 0 HD domain DUF150 PF02576.17 ORF56703 - 0.14 12.6 0.1 0.88 10.0 0.0 2.1 2 0 0 2 2 2 0 RimP N-terminal domain Pkinase PF00069.25 ORF50296 - 8.1e-80 268.0 0.3 8.1e-80 268.0 0.3 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF50296 - 8.8e-47 159.6 0.3 1.8e-45 155.2 0.0 2.2 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF50296 - 3.5e-24 85.0 12.1 7.7e-12 45.5 0.3 3.8 4 1 0 4 4 4 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF50296 - 1.4e-18 65.0 11.9 1.6e-05 24.1 2.2 5.3 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF50296 - 1.2e-16 60.2 18.7 5.2e-07 29.4 1.1 5.2 3 2 2 5 5 5 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF50296 - 3.1e-16 57.9 8.5 0.00017 21.2 0.0 5.5 5 0 0 5 5 5 3 EF-hand domain EF-hand_5 PF13202.6 ORF50296 - 1e-07 31.1 1.0 0.14 11.7 0.0 4.4 4 0 0 4 4 4 3 EF hand Pkinase_fungal PF17667.1 ORF50296 - 2.8e-06 26.4 0.0 5.6e-06 25.4 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase EF-hand_9 PF14658.6 ORF50296 - 1.8e-05 25.0 0.8 0.011 16.1 0.1 2.6 2 0 0 2 2 2 1 EF-hand domain Kdo PF06293.14 ORF50296 - 1.8e-05 24.2 0.0 3.4e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF50296 - 5.5e-05 22.6 0.0 0.0004 19.8 0.0 2.1 1 1 0 2 2 2 1 Kinase-like APH PF01636.23 ORF50296 - 0.00015 21.8 0.0 0.0094 15.9 0.0 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family EcKinase PF02958.20 ORF50296 - 0.00035 20.0 3.2 0.00058 19.3 0.4 2.5 2 1 1 3 3 3 1 Ecdysteroid kinase YrbL-PhoP_reg PF10707.9 ORF50296 - 0.00064 19.3 0.8 0.00064 19.3 0.8 1.7 2 0 0 2 2 2 1 PhoP regulatory network protein YrbL EF-hand_11 PF08976.11 ORF50296 - 0.00091 20.1 1.6 0.043 14.7 0.1 3.0 2 1 1 3 3 2 1 EF-hand domain EF-hand_4 PF12763.7 ORF50296 - 0.00091 19.1 0.5 0.00091 19.1 0.5 3.1 2 1 2 4 4 4 1 Cytoskeletal-regulatory complex EF hand DUF1456 PF07308.13 ORF50296 - 0.0032 17.8 0.4 0.19 12.1 0.1 3.0 2 0 0 2 2 2 1 Protein of unknown function (DUF1456) IclR PF01614.18 ORF50296 - 0.0066 16.3 0.3 0.028 14.2 0.0 2.0 2 0 0 2 2 2 1 Bacterial transcriptional regulator DUF5580 PF17743.1 ORF50296 - 0.0074 14.9 0.2 0.71 8.3 0.1 2.2 1 1 1 2 2 2 2 Family of unknown function (DUF5580) DUF4860 PF16152.5 ORF50296 - 0.0076 16.1 1.1 0.39 10.6 0.1 2.9 3 0 0 3 3 3 1 Domain of unknown function (DUF4860) SurA_N_2 PF13623.6 ORF50296 - 0.04 13.8 0.9 3.7 7.4 0.1 2.7 2 0 0 2 2 2 0 SurA N-terminal domain DUF3349 PF11829.8 ORF50296 - 0.67 10.8 5.6 2.9 8.7 0.3 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF3349) HU-DNA_bdg PF14848.6 ORF50296 - 4.7 7.2 8.8 1.9 8.5 0.0 3.6 3 1 1 4 4 4 0 DNA-binding domain MFS_1 PF07690.16 ORF40944 - 0.00011 21.2 5.0 0.00011 21.2 5.0 3.5 1 1 2 3 3 3 1 Major Facilitator Superfamily PGA2 PF07543.12 ORF32999 - 8.2 6.4 8.8 46 4.0 9.0 2.2 1 1 0 1 1 1 0 Protein trafficking PGA2 DUF4419 PF14388.6 ORF25943 - 9.1e-61 205.9 0.0 1.3e-60 205.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) PLDc_2 PF13091.6 ORF17631 - 5e-10 39.4 0.0 8.3e-10 38.7 0.0 1.4 1 0 0 1 1 1 1 PLD-like domain TMEM141 PF15110.6 ORF17631 - 0.031 14.8 0.1 0.072 13.7 0.1 1.6 1 0 0 1 1 1 0 TMEM141 protein family Ion_trans PF00520.31 ORF149227 - 8.7e-11 41.5 0.7 1.1e-10 41.1 0.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF149227 - 6.4e-09 36.1 1.0 2.2e-08 34.4 0.8 2.1 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF149227 - 2.3e-07 29.9 0.5 0.012 15.1 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF149227 - 5.1e-06 26.0 0.7 0.032 14.1 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF149227 - 2.7e-05 23.9 1.9 0.03 14.2 0.3 2.9 1 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF149227 - 0.00077 18.8 0.1 0.57 9.8 0.1 3.0 3 0 0 3 3 3 2 EF hand Nuc_sug_transp PF04142.15 ORF135436 - 1.3e-10 41.0 13.5 1.8e-09 37.2 13.5 2.0 1 1 0 1 1 1 1 Nucleotide-sugar transporter Picorna_P3A PF06363.11 ORF135436 - 0.96 9.4 3.8 2.3 8.1 2.0 2.4 2 0 0 2 2 2 0 Picornaviridae P3A protein Abhydrolase_1 PF00561.20 ORF123673 - 1.5e-08 34.6 0.0 4.2e-07 29.9 0.0 2.1 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF123673 - 2.6e-08 33.9 0.2 1.1e-06 28.7 0.0 2.4 1 1 1 2 2 2 1 TAP-like protein Aminotran_4 PF01063.19 ORF113182 - 9.8e-20 71.4 0.0 1.3e-19 71.0 0.0 1.2 1 0 0 1 1 1 1 Amino-transferase class IV Methyltransf_3 PF01596.17 ORF113182 - 1.8e-15 56.7 0.0 2.8e-15 56.1 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF113182 - 1.4e-09 38.9 0.1 6.7e-09 36.7 0.0 2.2 3 0 0 3 3 3 1 Methyltransferase domain PCMT PF01135.19 ORF113182 - 0.013 15.3 0.1 0.035 13.8 0.0 1.7 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF4419 PF14388.6 ORF111973 - 9.1e-61 205.9 0.0 1.3e-60 205.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) Aa_trans PF01490.18 ORF108189 - 1.2e-60 205.4 30.8 1.3e-60 205.2 30.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein CCG PF02754.16 ORF90169 - 2.3e-30 104.6 7.8 4.4e-13 49.3 0.2 3.7 3 0 0 3 3 3 3 Cysteine-rich domain Fer4_8 PF13183.6 ORF90169 - 1.6e-12 47.7 5.1 3.5e-12 46.6 4.1 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF90169 - 3.6e-12 46.7 5.3 1.1e-11 45.1 5.3 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF90169 - 5.1e-11 42.9 4.3 1.9e-10 41.1 4.3 2.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF90169 - 8.5e-07 29.8 4.0 2.4e-06 28.4 4.0 1.9 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 ORF90169 - 6.7e-06 26.2 10.4 0.026 14.7 0.4 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF90169 - 7e-06 26.1 9.8 0.00047 20.2 11.6 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 ORF90169 - 1.2e-05 24.9 7.9 0.035 13.9 1.6 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 ORF90169 - 2.3e-05 24.3 13.5 0.0095 16.0 1.8 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 ORF90169 - 4.4e-05 23.6 16.1 0.0021 18.4 1.2 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 ORF90169 - 5e-05 23.5 1.2 0.16 12.1 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF90169 - 0.00022 21.1 15.4 0.042 14.0 3.9 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 ORF90169 - 0.047 13.8 12.7 0.49 10.6 2.9 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF3390 PF11870.8 ORF90169 - 0.049 14.0 0.0 0.11 12.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) Fer4_20 PF14691.6 ORF90169 - 0.089 12.6 4.3 0.31 10.8 0.1 2.4 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_22 PF17179.4 ORF90169 - 0.5 11.2 12.9 4 8.4 0.6 2.9 2 1 0 2 2 2 0 4Fe-4S dicluster domain Mut7-C PF01927.16 ORF90169 - 6 7.0 7.1 6.8 6.8 4.8 2.2 2 1 0 2 2 2 0 Mut7-C RNAse domain Fer4_13 PF13370.6 ORF90169 - 9.6 6.8 10.4 16 6.1 1.0 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Sulfatase PF00884.23 ORF88669 - 2.5e-22 79.6 0.0 3.6e-22 79.1 0.0 1.2 1 0 0 1 1 1 1 Sulfatase DUF4994 PF16385.5 ORF88669 - 0.0042 17.0 0.5 0.027 14.4 0.2 2.2 1 1 1 2 2 2 1 Domain of unknown function DUF4976 PF16347.5 ORF88669 - 0.028 14.7 0.6 0.06 13.6 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) Phage_HK97_TLTM PF06120.11 ORF88636 - 0.048 12.8 1.9 0.079 12.1 1.9 1.3 1 0 0 1 1 1 0 Tail length tape measure protein Uds1 PF15456.6 ORF88636 - 0.14 12.3 1.4 0.19 11.9 0.4 1.7 2 0 0 2 2 2 0 Up-regulated During Septation Glycohydro_20b2 PF14845.6 ORF88636 - 0.46 11.1 4.7 7.6 7.2 0.0 2.9 2 1 0 2 2 2 0 beta-acetyl hexosaminidase like Phage_HK97_TLTM PF06120.11 ORF82493 - 0.048 12.8 1.9 0.079 12.1 1.9 1.3 1 0 0 1 1 1 0 Tail length tape measure protein Uds1 PF15456.6 ORF82493 - 0.14 12.3 1.4 0.19 11.9 0.4 1.7 2 0 0 2 2 2 0 Up-regulated During Septation Glycohydro_20b2 PF14845.6 ORF82493 - 0.46 11.1 4.7 7.6 7.2 0.0 2.9 2 1 0 2 2 2 0 beta-acetyl hexosaminidase like LMBR1 PF04791.16 ORF76779 - 2.6e-38 132.2 35.4 1.1e-30 107.0 9.5 2.3 1 1 1 2 2 2 2 LMBR1-like membrane protein DUF3810 PF12725.7 ORF76779 - 0.81 9.0 0.0 0.81 9.0 0.0 4.5 3 2 1 5 5 5 0 Protein of unknown function (DUF3810) zf-B_box PF00643.24 ORF75868 - 8.1e-07 29.1 3.6 1.7e-06 28.1 3.6 1.5 1 0 0 1 1 1 1 B-box zinc finger LRR_6 PF13516.6 ORF75868 - 2.3e-06 27.2 5.2 0.11 12.6 0.1 3.9 3 0 0 3 3 3 2 Leucine Rich repeat ALS2CR8 PF15299.6 ORF75868 - 0.017 15.0 0.8 0.03 14.2 0.8 1.3 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 SBP PF03110.14 ORF75868 - 0.035 14.4 0.8 0.1 12.9 0.8 1.8 1 0 0 1 1 1 0 SBP domain DUF745 PF05335.13 ORF75868 - 0.081 12.6 0.8 0.18 11.5 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF745) LRR_8 PF13855.6 ORF75868 - 0.16 11.7 6.2 0.9 9.4 2.4 3.6 2 1 1 3 3 3 0 Leucine rich repeat LRR_4 PF12799.7 ORF75868 - 0.24 11.9 16.2 0.061 13.8 5.2 4.2 3 1 1 4 4 4 0 Leucine Rich repeats (2 copies) ZYG-11_interact PF05884.12 ORF75868 - 0.63 9.4 3.4 1.4 8.2 0.1 2.3 1 1 0 2 2 2 0 Interactor of ZYG-11 LRR_1 PF00560.33 ORF75868 - 2.4 9.0 8.8 7.8 7.5 1.2 4.6 3 1 0 3 3 3 0 Leucine Rich Repeat Peptidase_C2 PF00648.21 ORF57399 - 2.2e-39 135.3 5.7 3.4e-39 134.6 5.7 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease DUF1923 PF09083.10 ORF57399 - 0.48 10.2 2.6 1 9.1 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1923) Tubulin PF00091.25 ORF4664 - 1.1e-64 218.3 0.0 1.6e-64 217.7 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF4664 - 2.9e-51 172.9 0.2 5.3e-51 172.0 0.2 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF4664 - 0.038 13.7 0.0 0.08 12.6 0.0 1.6 1 0 0 1 1 1 0 Tubulin domain Peptidase_M16_C PF05193.21 ORF1962 - 1.7e-20 73.8 0.0 2.5e-20 73.3 0.0 1.3 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 ORF1962 - 0.001 19.1 0.1 0.0022 18.0 0.0 1.6 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) Shisa PF13908.6 ORF17563 - 0.02 15.2 11.5 0.5 10.6 0.0 3.4 3 0 0 3 3 3 0 Wnt and FGF inhibitory regulator DUF4215 PF13948.6 ORF17563 - 0.028 14.8 8.0 0.028 14.8 8.0 3.3 4 0 0 4 4 4 0 Domain of unknown function (DUF4215) DUF5385 PF17359.2 ORF17563 - 0.14 11.7 0.0 0.14 11.7 0.0 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5385) Sensor PF13796.6 ORF17563 - 0.9 9.6 0.0 0.9 9.6 0.0 3.2 3 1 1 4 4 4 0 Putative sensor DUF1298 PF06974.13 ORF145618 - 2.1e-14 53.7 0.0 3.6e-14 52.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF145618 - 2.6e-09 37.3 0.0 5.9e-09 36.1 0.0 1.6 2 0 0 2 2 2 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 ORF145618 - 0.0049 15.6 0.1 0.0072 15.0 0.1 1.2 1 0 0 1 1 1 1 Condensation domain YrzO PF14142.6 ORF145340 - 0.025 14.5 0.2 0.071 13.0 0.2 1.8 1 0 0 1 1 1 0 YrzO-like protein Glyco_transf_5 PF08323.11 ORF131714 - 4.1e-45 154.4 0.0 9.1e-45 153.2 0.0 1.5 2 0 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 ORF131714 - 8.7e-14 51.4 0.0 1.4e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF131714 - 6.3e-10 39.6 0.0 1.1e-09 38.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Sugar_tr PF00083.24 ORF119684 - 4.4e-52 177.4 23.9 6.4e-52 176.9 23.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF119684 - 1.4e-35 122.9 63.6 2.5e-33 115.5 34.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily UQ_con PF00179.26 ORF115241 - 2.2e-37 127.9 0.0 3.6e-37 127.1 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme VWA_2 PF13519.6 ORF115241 - 8.2e-10 39.3 0.0 2e-09 38.0 0.0 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF115241 - 1.5e-09 38.3 0.0 6.9e-09 36.2 0.0 1.9 1 1 0 1 1 1 1 von Willebrand factor type A domain Prok-E2_B PF14461.6 ORF115241 - 0.00024 20.8 0.0 0.00045 19.9 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 ORF115241 - 0.13 12.1 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 UEV domain RWD PF05773.22 ORF115241 - 0.19 12.0 0.0 0.49 10.7 0.0 1.6 2 0 0 2 2 2 0 RWD domain DUF963 PF06131.11 ORF110080 - 5.4e-07 28.9 70.8 0.018 14.5 3.2 8.9 3 2 4 8 8 8 6 Schizosaccharomyces pombe repeat of unknown function (DUF963) zf-C3HC4 PF00097.25 ORF109402 - 0.00074 19.3 5.5 0.0017 18.2 5.5 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF109402 - 0.00084 19.3 2.7 0.00084 19.3 2.7 1.9 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_2 PF13639.6 ORF109402 - 0.00096 19.4 10.4 0.0015 18.8 7.1 2.3 2 0 0 2 2 2 1 Ring finger domain Zn_ribbon_17 PF17120.5 ORF109402 - 0.016 14.8 3.7 0.074 12.7 4.1 1.9 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF109402 - 0.02 14.6 8.7 0.29 10.9 6.5 2.6 2 0 0 2 2 2 0 RING-like zinc finger zf-rbx1 PF12678.7 ORF109402 - 0.021 15.1 4.5 0.021 15.1 4.5 2.1 2 0 0 2 2 2 0 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF109402 - 0.035 14.3 2.4 0.11 12.7 2.4 1.9 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF109402 - 3.2 7.8 10.4 4.2 7.4 8.0 2.2 2 0 0 2 2 2 0 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF109402 - 4.3 7.5 5.7 1.7 8.8 2.0 2.1 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger DUF4215 PF13948.6 ORF107239 - 0.028 14.8 8.0 0.028 14.8 8.0 3.2 4 0 0 4 4 4 0 Domain of unknown function (DUF4215) HMG_box PF00505.19 ORF96973 - 6e-34 116.3 16.3 6.6e-20 71.3 7.6 2.6 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF96973 - 3e-23 82.2 18.1 2.2e-15 57.0 7.8 2.5 2 0 0 2 2 2 2 HMG-box domain CHDNT PF08073.12 ORF96973 - 0.00065 19.6 0.3 0.0033 17.4 0.2 2.2 2 0 0 2 2 2 1 CHDNT (NUC034) domain HMG_box_5 PF14887.6 ORF96973 - 0.011 15.6 3.6 0.011 15.6 3.6 2.4 2 0 0 2 2 2 0 HMG (high mobility group) box 5 Pox_polyA_pol_N PF12630.7 ORF96973 - 0.031 14.6 0.9 0.031 14.6 0.9 2.3 2 0 0 2 2 2 0 Poxvirus poly(A) polymerase N-terminal domain Focal_AT PF03623.13 ORF96973 - 0.24 11.4 0.1 0.24 11.4 0.1 2.2 2 0 0 2 2 2 0 Focal adhesion targeting region Med11 PF10280.9 ORF96973 - 1.2 9.5 7.5 0.29 11.6 0.3 3.0 2 1 0 2 2 2 0 Mediator complex protein Pyr_redox_2 PF07992.14 ORF90857 - 2e-16 60.1 0.0 5e-16 58.8 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF90857 - 1.7e-11 44.5 0.0 1.1e-08 35.5 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF90857 - 0.01 15.4 0.1 0.36 10.4 0.0 2.7 2 1 1 3 3 3 0 FAD dependent oxidoreductase DUF1188 PF06690.11 ORF90857 - 0.15 11.5 0.0 12 5.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1188) AIRS_C PF02769.22 ORF88549 - 3.9e-22 79.1 0.1 7.4e-22 78.1 0.1 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF88549 - 1.1e-14 54.9 0.5 1.1e-14 54.9 0.5 3.0 3 1 1 4 4 4 1 AIR synthase related protein, N-terminal domain MFS_1 PF07690.16 ORF68424 - 1.1e-38 133.1 43.8 5.1e-35 121.0 20.5 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF68424 - 3e-37 128.6 17.6 3.9e-37 128.2 17.6 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_4 PF06779.14 ORF68424 - 0.00075 18.9 1.5 0.0018 17.6 1.5 1.6 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 ORF68424 - 0.001 18.0 19.3 0.019 13.8 6.4 2.4 2 1 0 2 2 2 2 MFS_1 like family MFS_3 PF05977.13 ORF68424 - 0.067 11.6 1.5 0.1 10.9 1.5 1.2 1 0 0 1 1 1 0 Transmembrane secretion effector DUF4897 PF16238.5 ORF68424 - 0.36 10.7 1.9 2.3 8.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4897) DUF2721 PF11026.8 ORF68424 - 6.4 6.7 0.0 6.4 6.7 0.0 4.6 3 2 1 4 4 4 0 Protein of unknown function (DUF2721) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks21.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks21.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks21.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks21.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFA1_2 PF17317.2 ORF98163 - 1.8 8.4 5.2 4.2 7.2 5.2 1.6 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 L31 PF09784.9 ORF97627 - 0.055 13.9 2.3 0.13 12.7 0.6 1.9 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L31 DUF4978 PF16349.5 ORF97627 - 0.11 12.1 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4978) IL6Ra-bind PF09240.10 ORF95216 - 0.14 12.6 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding Toxin_29 PF08116.11 ORF94586 - 0.0082 16.1 1.7 0.02 14.9 1.5 1.8 1 1 0 1 1 1 1 PhTx neurotoxin family Toxin_12 PF07740.12 ORF94586 - 0.43 11.3 6.7 0.35 11.6 5.3 1.7 1 1 0 1 1 1 0 Ion channel inhibitory toxin Sigma_reg_N PF13800.6 ORF94029 - 0.019 15.2 0.9 0.037 14.3 0.9 1.4 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF3128 PF11326.8 ORF93634 - 2.1 8.8 10.0 5.2 7.5 10.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3128) UPF0242 PF06785.11 ORF92990 - 0.069 13.2 0.9 0.096 12.8 0.9 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CRT-like PF08627.10 ORF91900 - 0.032 13.2 3.7 0.039 12.9 3.7 1.1 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like DUF4405 PF14358.6 ORF91900 - 0.92 10.1 5.3 1.9 9.1 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) Pkinase PF00069.25 ORF91555 - 0.017 14.5 0.0 0.017 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain DsbD_2 PF13386.6 ORF9120 - 0.017 15.1 0.7 0.022 14.7 0.7 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region tRNA_U5-meth_tr PF05958.11 ORF91012 - 2.2e-12 46.7 0.0 2.8e-12 46.3 0.0 1.3 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_31 PF13847.6 ORF91012 - 6e-05 22.9 0.0 9.6e-05 22.2 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF91012 - 0.014 16.1 0.0 0.047 14.4 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain FDX-ACB PF03147.14 ORF91012 - 0.13 12.7 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain DUF3509 PF12021.8 ORF90257 - 0.11 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3509) UPF0242 PF06785.11 ORF89581 - 0.069 13.2 0.9 0.096 12.8 0.9 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus LRR_2 PF07723.13 ORF89546 - 0.22 12.3 3.8 3.6 8.4 0.1 3.8 3 1 0 3 3 3 0 Leucine Rich Repeat DUF836 PF05768.14 ORF89342 - 0.03 14.7 2.7 0.031 14.7 1.9 1.4 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DUF5549 PF17703.1 ORF89256 - 0.96 9.1 1.7 1.1 8.9 1.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5549) PHD_2 PF13831.6 ORF88948 - 0.0011 18.5 0.3 0.0022 17.5 0.3 1.5 1 0 0 1 1 1 1 PHD-finger Crr6 PF08847.11 ORF87364 - 0.1 12.3 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Chlororespiratory reduction 6 Sre PF03125.18 ORF86143 - 0.0015 17.8 1.6 0.0017 17.6 1.6 1.1 1 0 0 1 1 1 1 C. elegans Sre G protein-coupled chemoreceptor DUF4179 PF13786.6 ORF85763 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF85763 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF85763 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF85763 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus Sigma_reg_N PF13800.6 ORF8400 - 0.019 15.2 0.9 0.037 14.3 0.9 1.4 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF349 PF03993.12 ORF83961 - 0.004 17.4 1.3 0.0071 16.6 1.3 1.5 1 0 0 1 1 1 1 Domain of Unknown Function (DUF349) zf-C4_Topoisom PF01396.19 ORF83872 - 0.069 12.9 1.5 0.15 11.9 1.5 1.5 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger DUF2826 PF11442.8 ORF83540 - 0.052 13.4 1.1 0.07 13.0 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2826) Ank_5 PF13857.6 ORF82818 - 6.3e-05 23.2 0.0 0.00011 22.4 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF82818 - 0.00044 20.8 0.1 0.0016 19.0 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF82818 - 0.00092 19.8 0.0 0.0015 19.1 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF82818 - 0.0077 16.7 0.0 0.026 15.1 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeat Efg1 PF10153.9 ORF81550 - 0.071 13.5 1.7 0.083 13.3 1.5 1.5 1 1 0 1 1 1 0 rRNA-processing protein Efg1 DUF3346 PF11826.8 ORF81008 - 0.29 10.9 1.5 0.35 10.6 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) CbiQ PF02361.16 ORF81008 - 0.33 10.5 6.9 0.33 10.6 6.9 1.1 1 0 0 1 1 1 0 Cobalt transport protein SAM_adeno_trans PF01887.16 ORF78086 - 0.095 12.1 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 S-adenosyl-l-methionine hydroxide adenosyltransferase Toxin_2 PF00451.19 ORF78041 - 0.031 14.6 0.8 0.053 13.8 0.8 1.3 1 0 0 1 1 1 0 Scorpion short toxin, BmKK2 Ribosomal_S26e PF01283.19 ORF77685 - 1.6e-42 144.3 10.5 1.9e-42 144.1 10.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S26e KN17_SH3 PF18131.1 ORF76925 - 0.075 13.2 0.2 0.15 12.2 0.2 1.4 1 0 0 1 1 1 0 KN17 SH3-like C-terminal domain LETM1 PF07766.13 ORF76925 - 0.12 11.7 0.4 0.15 11.4 0.4 1.1 1 0 0 1 1 1 0 LETM1-like protein DUF4179 PF13786.6 ORF75233 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF75233 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF75233 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF75233 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus Cohesin PF00963.18 ORF74013 - 0.012 15.9 0.1 0.015 15.6 0.1 1.1 1 0 0 1 1 1 0 Cohesin domain Sec63 PF02889.16 ORF73675 - 0.13 11.3 0.1 0.14 11.2 0.1 1.1 1 0 0 1 1 1 0 Sec63 Brl domain YiaAB PF05360.14 ORF72921 - 5.8e-11 42.5 13.4 3.3e-08 33.6 5.1 2.1 2 0 0 2 2 2 2 yiaA/B two helix domain DUF3040 PF11239.8 ORF72921 - 3.1 8.1 6.6 23 5.4 2.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) UPF0242 PF06785.11 ORF71011 - 0.069 13.2 0.9 0.096 12.8 0.9 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus NPCBM_assoc PF10633.9 ORF7016 - 0.078 13.2 0.1 0.1 12.8 0.1 1.3 1 0 0 1 1 1 0 NPCBM-associated, NEW3 domain of alpha-galactosidase COMPASS-Shg1 PF05205.12 ORF68385 - 0.2 12.4 11.7 0.27 12.0 11.7 1.2 1 0 0 1 1 1 0 COMPASS (Complex proteins associated with Set1p) component shg1 DUF3678 PF12435.8 ORF68331 - 0.0096 15.3 0.8 0.022 14.1 0.8 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3678) DUF1604 PF07713.13 ORF66263 - 0.11 12.4 0.2 0.21 11.4 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) DUF4179 PF13786.6 ORF65586 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF65586 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF65586 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF65586 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus Sina PF03145.16 ORF65214 - 0.12 12.3 0.9 0.27 11.1 0.9 1.6 1 1 0 1 1 1 0 Seven in absentia protein family DUF4695 PF15766.5 ORF64982 - 0.074 13.3 2.7 0.11 12.8 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4695) SH3_9 PF14604.6 ORF64351 - 0.0033 17.3 0.3 0.01 15.7 0.3 1.8 1 1 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF64351 - 0.021 14.4 2.0 0.085 12.5 0.4 2.5 2 1 0 2 2 2 0 SH3 domain Cadherin_C_2 PF16492.5 ORF64193 - 0.035 14.9 0.0 0.043 14.6 0.0 1.2 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal TMEM132D_C PF15706.5 ORF64193 - 0.055 13.3 0.0 0.066 13.0 0.0 1.3 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term NUDIX PF00293.28 ORF6419 - 4.8e-18 65.5 0.2 6e-18 65.2 0.2 1.0 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 ORF6419 - 0.00015 21.3 0.0 0.00019 20.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4916) NUDIX_4 PF14815.6 ORF6419 - 0.001 19.0 0.0 0.003 17.5 0.0 1.6 1 1 0 1 1 1 1 NUDIX domain IlvN PF07991.12 ORF6382 - 0.18 11.4 0.0 0.24 10.9 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain PCSK9_C3 PF18463.1 ORF63278 - 0.0017 18.5 3.1 1 9.7 0.3 2.4 2 0 0 2 2 2 2 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain zf_CCCH_5 PF18384.1 ORF63278 - 1.1 9.4 9.3 16 5.7 1.7 3.7 2 2 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) DUF883 PF05957.13 ORF63068 - 0.15 12.7 4.4 0.2 12.3 4.4 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) DUF3346 PF11826.8 ORF62772 - 0.29 10.9 1.5 0.35 10.6 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) CbiQ PF02361.16 ORF62772 - 0.33 10.5 6.9 0.33 10.6 6.9 1.1 1 0 0 1 1 1 0 Cobalt transport protein DUF1932 PF09130.11 ORF62412 - 0.1 12.6 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) DUF5519 PF17648.1 ORF61494 - 0.04 13.8 0.1 0.095 12.6 0.1 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5519) DUF5099 PF17025.5 ORF6127 - 0.031 14.7 0.2 0.043 14.2 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5099) TauE PF01925.19 ORF61147 - 2.7e-08 33.7 0.0 3.2e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF4576 PF15144.6 ORF61147 - 0.042 13.7 0.2 0.092 12.6 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4576) DRMBL PF07522.14 ORF60435 - 0.35 11.1 3.8 4.4 7.5 0.5 2.2 1 1 1 2 2 2 0 DNA repair metallo-beta-lactamase Pox_A_type_inc PF04508.12 ORF6012 - 0.0024 17.6 0.4 0.0051 16.6 0.4 1.6 1 0 0 1 1 1 1 Viral A-type inclusion protein repeat zf-B_box PF00643.24 ORF6012 - 0.019 15.1 10.4 0.026 14.6 10.4 1.2 1 0 0 1 1 1 0 B-box zinc finger PHD PF00628.29 ORF6012 - 0.028 14.3 6.7 0.049 13.5 6.7 1.5 1 1 0 1 1 1 0 PHD-finger PHD_2 PF13831.6 ORF6012 - 0.03 13.9 2.4 0.068 12.7 2.4 1.6 1 0 0 1 1 1 0 PHD-finger V-SNARE PF05008.15 ORF6012 - 0.055 13.8 3.1 0.067 13.6 0.9 2.2 2 1 0 2 2 2 0 Vesicle transport v-SNARE protein N-terminus TDA11 PF17084.5 ORF6012 - 0.064 12.2 0.1 0.07 12.1 0.1 1.1 1 0 0 1 1 1 0 Topoisomerase I damage affected protein 11 zf-Tim10_DDP PF02953.15 ORF59810 - 0.013 15.1 0.5 0.027 14.1 0.5 1.4 1 0 0 1 1 1 0 Tim10/DDP family zinc finger AAA_19 PF13245.6 ORF5758 - 0.0084 16.5 0.0 0.011 16.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF5758 - 0.024 14.4 0.0 0.029 14.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain Acetyltransf_11 PF13720.6 ORF57237 - 0.02 15.3 0.9 0.03 14.8 0.9 1.3 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF5371 PF17341.2 ORF56893 - 0.0074 16.5 1.6 0.013 15.7 1.6 1.6 1 1 0 1 1 1 1 Family of unknown function (DUF5371) Imm30 PF15565.6 ORF56893 - 0.045 13.8 0.6 0.083 13.0 0.6 1.5 1 1 0 1 1 1 0 Immunity protein 30 EF-hand_14 PF17959.1 ORF56893 - 0.21 11.9 2.1 0.34 11.3 2.1 1.4 1 1 0 1 1 1 0 EF-hand domain FTCD_C PF04961.12 ORF56893 - 0.22 11.3 3.5 0.12 12.1 1.6 1.7 2 1 0 2 2 2 0 Formiminotransferase-cyclodeaminase Thioredoxin PF00085.20 ORF56786 - 0.0031 17.5 0.0 0.1 12.6 0.0 2.0 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF56786 - 0.039 14.3 0.6 0.092 13.1 0.2 1.7 2 0 0 2 2 2 0 Thioredoxin-like Viral_alk_exo PF01771.17 ORF56786 - 0.044 12.6 0.3 0.049 12.5 0.3 1.1 1 0 0 1 1 1 0 Viral alkaline exonuclease DpnII PF04556.12 ORF56025 - 0.3 10.4 0.2 0.38 10.0 0.2 1.1 1 0 0 1 1 1 0 DpnII restriction endonuclease DUF2530 PF10745.9 ORF56012 - 0.016 15.4 1.3 0.73 10.1 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2530) UPF0242 PF06785.11 ORF5595 - 0.069 13.2 0.9 0.096 12.8 0.9 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2076 PF09849.9 ORF55485 - 0.003 17.6 6.5 0.0037 17.3 6.5 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) WD40 PF00400.32 ORF54466 - 0.0049 17.7 0.0 0.012 16.5 0.0 1.6 1 0 0 1 1 1 1 WD domain, G-beta repeat VID27 PF08553.10 ORF54466 - 0.021 13.9 0.0 0.024 13.7 0.0 1.1 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain eIF2A PF08662.11 ORF54466 - 0.025 14.4 0.1 0.029 14.3 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A ANAPC4_WD40 PF12894.7 ORF54466 - 0.13 12.6 0.0 0.27 11.6 0.0 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Ku_PK_bind PF08785.11 ORF54401 - 6.6e-28 97.3 0.1 8e-28 97.0 0.1 1.1 1 0 0 1 1 1 1 Ku C terminal domain like Wza_C PF18412.1 ORF53364 - 4.1e-17 61.6 0.4 7.7e-17 60.7 0.4 1.5 1 0 0 1 1 1 1 Outer-membrane lipoprotein Wza C-terminal domain Myticin-prepro PF10690.9 ORF51282 - 0.48 10.7 10.8 0.72 10.1 10.8 1.4 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel DUF2321 PF10083.9 ORF50001 - 0.065 12.9 0.4 0.1 12.2 0.2 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) DUF1932 PF09130.11 ORF49758 - 0.1 12.6 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) Ig_J_chain PF15097.6 ORF47721 - 0.042 13.7 0.1 0.048 13.5 0.1 1.2 1 0 0 1 1 1 0 Immunoglobulin J chain DUF4921 PF16268.5 ORF47721 - 0.073 11.9 1.0 0.086 11.6 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4921) GTP_cyclohydro2 PF00925.20 ORF47553 - 0.056 13.0 0.1 0.068 12.8 0.1 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase II Tmemb_9 PF05434.11 ORF47553 - 0.87 9.5 9.1 0.076 12.9 5.0 1.4 1 1 0 1 1 1 0 TMEM9 DUF4179 PF13786.6 ORF47319 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF47319 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF47319 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF47319 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus Band_7 PF01145.25 ORF47249 - 0.00071 19.6 0.0 0.0008 19.5 0.0 1.0 1 0 0 1 1 1 1 SPFH domain / Band 7 family GGA_N-GAT PF18308.1 ORF46519 - 0.029 14.0 0.6 0.058 13.0 0.6 1.4 1 0 0 1 1 1 0 GGA N-GAT domain FeoC PF09012.10 ORF46519 - 0.037 14.1 0.0 0.07 13.2 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator TFIIE_alpha PF02002.17 ORF46519 - 0.054 13.4 2.2 0.066 13.1 2.2 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit ANAPC2 PF08672.11 ORF46519 - 0.075 13.6 0.0 0.14 12.7 0.0 1.5 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 DUF2487 PF10673.9 ORF44525 - 0.22 11.6 0.0 0.76 9.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2487) DUF4547 PF15080.6 ORF44456 - 0.017 14.7 0.1 0.021 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4547) zf-U1 PF06220.12 ORF44166 - 0.0034 17.1 0.4 0.0075 16.0 0.4 1.5 1 0 0 1 1 1 1 U1 zinc finger CemA PF03040.14 ORF43613 - 0.27 11.2 0.1 0.44 10.4 0.1 1.3 1 0 0 1 1 1 0 CemA family HCMV_UL139 PF12507.8 ORF43165 - 0.42 11.0 1.8 0.75 10.2 1.8 1.4 1 0 0 1 1 1 0 Human Cytomegalovirus UL139 protein CC PF04942.14 ORF4246 - 0.016 15.3 1.0 0.03 14.5 1.0 1.4 1 0 0 1 1 1 0 CC domain BC10 PF06726.12 ORF41029 - 0.022 15.0 9.4 0.045 14.0 2.2 2.3 2 0 0 2 2 2 0 Bladder cancer-related protein BC10 DUF4118 PF13493.6 ORF41029 - 1.2 8.9 10.0 3 7.7 1.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4118) Golgin_A5 PF09787.9 ORF40545 - 0.0011 18.5 8.8 0.0014 18.1 8.8 1.3 1 0 0 1 1 1 1 Golgin subfamily A member 5 DUF3450 PF11932.8 ORF40545 - 0.0014 18.0 8.3 0.0015 17.9 8.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) TMPIT PF07851.13 ORF40545 - 0.077 12.2 10.0 0.087 12.1 10.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein BPL_N PF09825.9 ORF40545 - 0.2 10.7 0.9 0.19 10.8 0.9 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal Atg14 PF10186.9 ORF40545 - 0.55 9.3 10.1 0.62 9.1 10.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 EMC3_TMCO1 PF01956.16 ORF40545 - 4.6 6.9 7.1 5.2 6.8 7.1 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Glyco_transf_18 PF15024.6 ORF40433 - 0.019 13.6 1.5 0.021 13.4 1.5 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 bZIP_2 PF07716.15 ORF40433 - 0.032 14.3 2.3 0.065 13.3 0.1 2.5 2 1 0 2 2 2 0 Basic region leucine zipper TPR_MLP1_2 PF07926.12 ORF40433 - 0.033 14.2 0.5 0.033 14.2 0.5 2.1 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF1664 PF07889.12 ORF40433 - 0.045 13.8 5.2 0.06 13.4 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) TFR_dimer PF04253.15 ORF40433 - 0.051 13.7 0.5 0.092 12.9 0.5 1.4 1 0 0 1 1 1 0 Transferrin receptor-like dimerisation domain DUF3018 PF11455.8 ORF40311 - 0.025 14.5 0.2 1.2 9.1 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3018) DUF1299 PF06975.11 ORF40311 - 1.4 9.0 5.7 2.2 8.4 0.1 2.6 3 1 0 3 3 3 0 Protein of unknown function (DUF1299) HTH_33 PF13592.6 ORF3935 - 0.08 12.6 0.4 0.27 10.9 0.0 2.1 1 1 1 2 2 2 0 Winged helix-turn helix UDG PF03167.19 ORF39332 - 0.14 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Uracil DNA glycosylase superfamily Mago-bind PF09282.10 ORF37906 - 0.027 14.3 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 Mago binding DUF498 PF04430.14 ORF36704 - 0.13 12.3 0.0 0.22 11.6 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) MNE1 PF13762.6 ORF35697 - 0.16 11.9 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component Tim17 PF02466.19 ORF35318 - 3.3e-14 53.2 0.9 5e-14 52.6 0.4 1.6 1 1 1 2 2 2 1 Tim17/Tim22/Tim23/Pmp24 family Complex1_51K PF01512.17 ORF35318 - 0.016 15.1 0.1 0.02 14.8 0.1 1.1 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase 51 Kd subunit DUF778 PF05608.12 ORF34727 - 3.4e-06 27.6 0.0 1.2e-05 25.8 0.0 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF778) DUF4179 PF13786.6 ORF33926 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF33926 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF33926 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF33926 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus DUF3346 PF11826.8 ORF33295 - 0.29 10.9 1.5 0.35 10.6 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) CbiQ PF02361.16 ORF33295 - 0.33 10.5 6.9 0.33 10.6 6.9 1.1 1 0 0 1 1 1 0 Cobalt transport protein Neuropep_like PF15161.6 ORF32874 - 0.14 11.8 0.5 3 7.6 0.0 2.2 2 0 0 2 2 2 0 Neuropeptide-like PCRF PF03462.18 ORF32874 - 0.18 11.6 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 PCRF domain zf-C2H2_aberr PF17017.5 ORF31264 - 0.01 16.0 1.3 0.013 15.6 1.3 1.1 1 0 0 1 1 1 0 Aberrant zinc-finger FAM219A PF15260.6 ORF31264 - 0.018 15.4 0.6 0.022 15.1 0.6 1.1 1 0 0 1 1 1 0 Protein family FAM219A zf-C4 PF00105.18 ORF30773 - 0.14 12.6 3.3 0.21 12.0 3.3 1.4 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) P_C10 PF14974.6 ORF30493 - 3.8e-05 23.7 4.4 5.7e-05 23.1 4.4 1.3 1 0 0 1 1 1 1 Protein C10 Gar1 PF04410.14 ORF29299 - 1.4e-08 34.7 0.0 1.6e-08 34.5 0.0 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region Streptin-Immun PF11083.8 ORF28697 - 0.0038 17.6 5.6 0.12 12.8 1.8 2.3 2 0 0 2 2 2 2 Lantibiotic streptin immunity protein DUF4521 PF15021.6 ORF28697 - 0.043 13.7 0.6 0.05 13.5 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4521) TssO PF17561.2 ORF28697 - 0.098 12.8 8.2 0.061 13.4 6.4 1.6 1 1 0 1 1 1 0 Type VI secretion system, TssO DUF2228 PF10228.9 ORF28697 - 0.32 10.7 6.2 0.17 11.6 1.2 2.0 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2228) MtrG PF04210.13 ORF28697 - 0.41 10.5 1.6 16 5.5 0.2 2.3 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G YabA PF06156.13 ORF28697 - 1.5 9.5 7.6 1.9 9.2 0.6 2.2 1 1 1 2 2 2 0 Initiation control protein YabA DUF4200 PF13863.6 ORF28697 - 4.3 7.8 15.6 0.48 10.8 10.5 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Toxin_32 PF08120.11 ORF24942 - 4.7 7.1 6.1 34 4.4 0.9 3.0 3 0 0 3 3 3 0 Tamulustoxin family Spo7_2_N PF15407.6 ORF22137 - 0.11 12.2 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Sporulation protein family 7 MFS_Mycoplasma PF07672.13 ORF21839 - 0.012 14.9 4.0 0.013 14.8 4.0 1.3 1 1 0 1 1 1 0 Mycoplasma MFS transporter DUF2325 PF10087.9 ORF20431 - 0.072 13.2 0.3 0.072 13.2 0.3 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) Beta_protein PF14350.6 ORF20431 - 0.1 12.0 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Beta protein QRPTase_C PF01729.19 ORF19475 - 0.00044 20.1 0.0 0.00054 19.8 0.0 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain Mis12 PF05859.12 ORF19475 - 0.029 14.4 2.3 0.047 13.8 2.3 1.4 1 0 0 1 1 1 0 Mis12 protein DUF1068 PF06364.12 ORF1944 - 0.051 13.5 1.4 0.058 13.3 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) HET PF06985.11 ORF19414 - 0.077 13.3 0.0 0.17 12.2 0.0 1.6 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) NAD4L PF06235.11 ORF19396 - 0.0012 18.8 3.1 0.0012 18.8 3.1 1.7 2 0 0 2 2 2 1 NADH dehydrogenase subunit 4L (NAD4L) Nipped-B_C PF12830.7 ORF19396 - 0.091 12.7 0.7 0.11 12.4 0.7 1.1 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus GASA PF02704.14 ORF19307 - 5.6 7.2 9.1 9.7 6.4 2.4 2.4 2 0 0 2 2 2 0 Gibberellin regulated protein GCSF PF16647.5 ORF19197 - 0.069 13.0 0.1 0.098 12.5 0.1 1.3 1 0 0 1 1 1 0 Granulocyte colony-stimulating factor zf-H2C2_2 PF13465.6 ORF18883 - 1.6e-24 85.2 19.9 1.1e-07 32.0 0.2 4.6 5 0 0 5 5 5 4 Zinc-finger double domain zf-C2H2 PF00096.26 ORF18883 - 2.2e-20 71.9 19.6 3.3e-06 27.2 0.3 4.2 4 0 0 4 4 4 4 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF18883 - 1.3e-13 50.5 16.7 0.0014 19.3 0.2 4.3 4 0 0 4 4 4 4 C2H2-type zinc finger zf-H2C2_5 PF13909.6 ORF18883 - 0.00023 20.9 3.8 0.013 15.3 0.1 5.0 6 0 0 6 6 6 2 C2H2-type zinc-finger domain zf-met PF12874.7 ORF18883 - 0.0019 18.5 6.1 0.3 11.5 0.1 4.3 4 0 0 4 4 4 1 Zinc-finger of C2H2 type zf-C2H2_8 PF15909.5 ORF18883 - 0.0073 16.6 3.6 1.4 9.3 0.5 2.4 1 1 1 2 2 2 2 C2H2-type zinc ribbon Spp-24 PF07448.11 ORF18883 - 0.01 16.0 1.2 44 4.4 0.0 3.6 4 0 0 4 4 4 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain MORN_2 PF07661.13 ORF18883 - 0.013 15.6 0.0 33 5.2 0.0 3.3 3 0 0 3 3 3 0 MORN repeat variant zf-C2H2_jaz PF12171.8 ORF18883 - 0.018 15.3 9.1 6.9 7.1 0.2 4.4 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding zf-C2H2_aberr PF17017.5 ORF18883 - 0.65 10.1 8.0 8.2 6.5 2.1 3.0 1 1 1 2 2 2 0 Aberrant zinc-finger zf-C2H2_6 PF13912.6 ORF18883 - 0.68 10.0 18.0 0.63 10.1 0.3 5.0 4 2 0 4 4 4 0 C2H2-type zinc finger DUF5323 PF17257.2 ORF17972 - 0.026 14.4 1.3 0.048 13.5 1.3 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5323) DUF5099 PF17025.5 ORF17825 - 0.031 14.7 0.2 0.043 14.2 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5099) DUF3281 PF11685.8 ORF17564 - 0.0074 15.7 0.1 0.0078 15.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3281) eRF1_2 PF03464.15 ORF17564 - 0.073 13.4 2.8 0.075 13.3 1.9 1.5 1 1 1 2 2 2 0 eRF1 domain 2 zf-H2C2_2 PF13465.6 ORF175 - 1.3e-08 34.9 6.5 9.6e-08 32.1 1.5 3.6 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF175 - 3.5e-07 30.3 19.0 0.00015 22.0 1.8 4.2 3 1 1 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF175 - 1.3e-05 25.7 18.3 0.00021 21.9 1.5 3.8 3 1 1 4 4 4 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF175 - 0.029 15.1 1.8 0.029 15.1 1.8 2.2 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_jaz PF12171.8 ORF175 - 1.1 9.6 10.5 7.6 6.9 0.6 2.7 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding Peptidase_U57 PF05582.12 ORF16143 - 0.022 14.0 0.7 0.024 13.9 0.7 1.1 1 0 0 1 1 1 0 YabG peptidase U57 DUF4933 PF16287.5 ORF152395 - 0.05 13.0 0.0 0.056 12.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4933) MAM33 PF02330.16 ORF152326 - 4.9e-18 65.9 0.3 6.1e-18 65.6 0.3 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein Sigma_reg_N PF13800.6 ORF152239 - 0.017 15.4 0.9 0.037 14.3 0.9 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal SQAPI PF16845.5 ORF151311 - 0.055 13.8 0.0 0.079 13.3 0.0 1.3 1 0 0 1 1 1 0 Aspartic acid proteinase inhibitor Radial_spoke PF04712.12 ORF151311 - 0.099 11.6 0.1 0.096 11.6 0.1 1.1 1 0 0 1 1 1 0 Radial spokehead-like protein DUF998 PF06197.13 ORF150804 - 0.00023 20.8 1.2 0.0004 20.0 1.2 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF998) DUF4116 PF13475.6 ORF150567 - 6.4e-08 32.2 0.0 1.2e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4116) DUF3418 PF11898.8 ORF150099 - 0.021 13.6 0.0 0.023 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) Cyt-b5 PF00173.28 ORF150037 - 1.4e-20 73.2 0.0 1.8e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain RmuC PF02646.16 ORF149439 - 0.021 14.0 0.0 0.027 13.6 0.0 1.1 1 0 0 1 1 1 0 RmuC family OmdA PF13376.6 ORF149439 - 0.03 14.3 0.1 0.051 13.6 0.1 1.5 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated EF-hand_6 PF13405.6 ORF149283 - 0.0029 17.4 0.1 0.0049 16.7 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF149283 - 0.024 15.1 0.0 0.034 14.6 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair FolB PF02152.18 ORF148516 - 2.5e-25 89.2 1.0 2.8e-25 89.0 1.0 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase SAVED PF18145.1 ORF148516 - 0.048 13.5 0.3 0.054 13.3 0.3 1.2 1 0 0 1 1 1 0 SMODS-associated and fused to various effectors sensor domain Aph-1 PF06105.12 ORF146803 - 0.00054 19.4 1.7 0.00054 19.4 1.7 1.8 1 1 1 2 2 2 1 Aph-1 protein Glyco_transf_10 PF00852.19 ORF146755 - 0.12 12.1 0.7 0.2 11.4 0.4 1.5 1 1 1 2 2 2 0 Glycosyltransferase family 10 (fucosyltransferase) C-term DUF3418 PF11898.8 ORF14623 - 0.021 13.6 0.0 0.023 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) Tautomerase PF01361.21 ORF145217 - 0.00071 19.5 0.1 0.0011 18.9 0.1 1.3 1 0 0 1 1 1 1 Tautomerase enzyme MIF PF01187.18 ORF145217 - 0.024 14.9 0.1 0.03 14.6 0.1 1.1 1 0 0 1 1 1 0 Macrophage migration inhibitory factor (MIF) Dppa2_A PF14049.6 ORF143604 - 0.72 10.0 4.5 4.9 7.4 2.6 2.4 2 1 0 2 2 2 0 Dppa2/4 conserved region in higher vertebrates UPF0242 PF06785.11 ORF143330 - 0.069 13.2 0.9 0.096 12.8 0.9 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus LRRC37AB_C PF14914.6 ORF141887 - 0.21 11.5 3.1 0.37 10.7 3.1 1.7 1 1 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain Alginate_exp PF13372.6 ORF141620 - 0.071 11.8 0.1 5.8 5.5 0.0 2.1 2 0 0 2 2 2 0 Alginate export TSKS PF15358.6 ORF141314 - 0.073 11.4 0.4 0.08 11.3 0.4 1.1 1 0 0 1 1 1 0 Testis-specific serine kinase substrate DUF3087 PF11286.8 ORF141201 - 0.054 13.0 0.3 0.081 12.4 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) Pneumo_M2 PF07380.11 ORF140981 - 0.039 14.2 0.3 0.064 13.5 0.3 1.4 1 0 0 1 1 1 0 Pneumovirus M2 protein WW PF00397.26 ORF140278 - 0.008 16.2 0.8 0.016 15.3 0.8 1.5 1 0 0 1 1 1 1 WW domain UPF0242 PF06785.11 ORF139804 - 0.069 13.2 0.9 0.096 12.8 0.9 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus BCA_ABC_TP_C PF12399.8 ORF138260 - 0.15 12.0 1.5 6.6 6.8 0.2 2.4 2 0 0 2 2 2 0 Branched-chain amino acid ATP-binding cassette transporter RINGv PF12906.7 ORF137840 - 1.1e-15 57.5 8.4 1.7e-15 56.8 8.4 1.3 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF137840 - 0.0003 20.9 7.2 0.00049 20.2 5.7 1.9 1 1 1 2 2 2 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF137840 - 0.0014 18.9 9.0 0.0017 18.6 7.8 1.8 1 1 1 2 2 2 1 Ring finger domain DUF587 PF04532.12 ORF137840 - 0.045 13.0 2.0 0.055 12.7 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF587) zf-C3HC4_3 PF13920.6 ORF137840 - 3.8 7.4 10.6 6.3 6.8 9.0 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) TMEM72 PF16054.5 ORF135732 - 0.14 11.9 0.8 0.23 11.2 0.8 1.3 1 0 0 1 1 1 0 Transmembrane protein family 72 EFP_N PF08207.12 ORF134736 - 9.5e-06 25.6 0.0 2.1e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain DUF4131 PF13567.6 ORF133228 - 0.85 9.2 5.1 1.3 8.7 5.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Ank_2 PF12796.7 ORF131529 - 4.1e-18 65.7 0.1 5e-18 65.5 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF131529 - 1.6e-12 47.7 0.0 1e-06 29.2 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF131529 - 7.3e-11 41.3 0.0 0.00076 19.7 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF131529 - 1.2e-09 38.1 0.0 0.023 15.1 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF131529 - 6.3e-07 29.6 0.2 0.17 12.2 0.0 3.1 2 1 1 3 3 3 3 Ankyrin repeats (many copies) DUF2170 PF09938.9 ORF131529 - 0.025 14.3 0.0 0.77 9.5 0.0 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2170) Involucrin PF00904.17 ORF131529 - 0.69 10.8 4.5 9.6 7.3 1.1 3.2 3 0 0 3 3 3 0 Involucrin repeat Ank_2 PF12796.7 ORF130571 - 1.9e-18 66.8 0.1 3.1e-18 66.1 0.1 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF130571 - 6.3e-18 64.9 0.1 3.1e-10 40.4 0.0 2.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF130571 - 2.5e-17 62.7 3.9 2.1e-09 37.5 0.2 3.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF130571 - 1.5e-16 60.0 0.5 4.9e-06 26.8 0.0 3.3 3 1 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF130571 - 5.4e-14 50.9 0.2 0.00058 20.1 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat LRR_9 PF14580.6 ORF129659 - 0.0013 18.3 1.2 0.38 10.2 0.3 2.0 1 1 1 2 2 2 2 Leucine-rich repeat Rad9_Rad53_bind PF08605.10 ORF129659 - 0.02 15.1 0.1 0.15 12.3 0.1 2.0 1 1 0 1 1 1 0 Fungal Rad9-like Rad53-binding Phage_holin_2_3 PF16080.5 ORF127838 - 0.16 11.7 3.9 2.2 8.1 0.1 2.4 2 0 0 2 2 2 0 Bacteriophage holin family HP1 KIAA1430 PF13879.6 ORF127789 - 0.0059 17.3 14.9 0.011 16.5 14.3 1.7 1 1 1 2 2 2 1 KIAA1430 homologue SURF6 PF04935.12 ORF127789 - 0.017 14.9 6.6 0.021 14.6 6.6 1.1 1 0 0 1 1 1 0 Surfeit locus protein 6 Flu_B_M2 PF04772.12 ORF127789 - 0.12 12.6 1.9 0.16 12.2 1.3 1.6 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) DUF2126 PF09899.9 ORF127691 - 0.2 9.7 0.0 0.21 9.6 0.0 1.0 1 0 0 1 1 1 0 Putative amidoligase enzyme (DUF2126) DUF1932 PF09130.11 ORF127668 - 0.1 12.6 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) zf-RING_2 PF13639.6 ORF127498 - 4.3e-13 49.4 11.2 5.9e-13 48.9 11.2 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF127498 - 2.6e-08 33.5 10.1 4.8e-08 32.6 10.1 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF127498 - 4.3e-08 33.3 11.8 1e-07 32.1 11.8 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF127498 - 2e-06 27.6 9.8 3e-06 27.0 9.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF127498 - 8.2e-06 25.6 8.4 1.1e-05 25.2 8.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF127498 - 6.1e-05 22.9 10.2 8.6e-05 22.4 10.2 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF127498 - 8.6e-05 22.5 6.6 0.00015 21.7 6.6 1.4 1 0 0 1 1 1 1 RING-type zinc-finger FANCL_C PF11793.8 ORF127498 - 0.00012 22.1 10.3 0.0018 18.4 10.3 2.2 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 ORF127498 - 0.00019 21.2 11.7 0.0003 20.6 11.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF127498 - 0.00071 19.6 6.5 0.0034 17.4 6.5 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF127498 - 0.0029 17.4 6.4 0.005 16.7 6.4 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF127498 - 0.011 15.9 10.4 0.018 15.1 10.4 1.4 1 0 0 1 1 1 0 RING-variant domain Zn_ribbon_17 PF17120.5 ORF127498 - 0.019 14.6 8.9 0.13 11.9 9.3 1.9 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type Baculo_RING PF05883.11 ORF127498 - 0.14 12.1 4.4 0.16 11.9 4.4 1.3 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain CTU2 PF10288.9 ORF127498 - 0.21 11.8 5.0 1.8 8.9 5.0 2.0 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Prok-RING_1 PF14446.6 ORF127498 - 0.25 11.3 7.5 0.62 10.0 2.4 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 P_C10 PF14974.6 ORF126293 - 3.8e-05 23.7 4.4 5.7e-05 23.1 4.4 1.3 1 0 0 1 1 1 1 Protein C10 GGA_N-GAT PF18308.1 ORF125973 - 0.029 14.0 0.6 0.058 13.0 0.6 1.4 1 0 0 1 1 1 0 GGA N-GAT domain FeoC PF09012.10 ORF125973 - 0.037 14.1 0.0 0.07 13.2 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator TFIIE_alpha PF02002.17 ORF125973 - 0.054 13.4 2.2 0.066 13.1 2.2 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit ANAPC2 PF08672.11 ORF125973 - 0.075 13.6 0.0 0.14 12.7 0.0 1.5 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 UPF0029 PF01205.19 ORF124473 - 0.03 14.6 0.2 0.038 14.3 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein family UPF0029 Lipoprotein_17 PF04200.12 ORF124473 - 0.23 11.8 9.4 0.28 11.6 9.1 1.4 1 1 0 1 1 1 0 Lipoprotein associated domain Myotoxins PF00819.17 ORF124455 - 0.012 15.8 0.2 0.025 14.9 0.2 1.5 1 0 0 1 1 1 0 Myotoxin, crotamine DUF3995 PF13160.6 ORF124014 - 0.053 13.9 3.7 0.074 13.4 3.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) DUF4179 PF13786.6 ORF122972 - 0.047 14.2 0.2 0.062 13.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) Pterin_4a PF01329.19 ORF122972 - 0.075 13.2 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase Glyco_hydro_31 PF01055.26 ORF12252 - 0.019 14.1 0.1 0.019 14.1 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 31 GST_C_6 PF17171.4 ORF121501 - 0.085 12.7 1.4 0.2 11.5 0.0 2.2 3 0 0 3 3 3 0 Glutathione S-transferase, C-terminal domain DUF2387 PF09526.10 ORF121324 - 1.4 9.2 8.9 0.1 12.8 2.6 2.0 1 1 1 2 2 2 0 Probable metal-binding protein (DUF2387) CART PF06373.11 ORF120466 - 0.52 10.5 8.5 0.79 9.9 8.5 1.4 1 0 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) SH3_9 PF14604.6 ORF118766 - 0.0033 17.3 0.3 0.01 15.7 0.3 1.8 1 1 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF118766 - 0.021 14.4 2.0 0.085 12.5 0.4 2.5 2 1 0 2 2 2 0 SH3 domain CheR_N PF03705.15 ORF115827 - 0.55 10.0 4.9 0.97 9.2 4.9 1.4 1 0 0 1 1 1 0 CheR methyltransferase, all-alpha domain P_C10 PF14974.6 ORF115040 - 3.8e-05 23.7 4.4 5.7e-05 23.1 4.4 1.3 1 0 0 1 1 1 1 Protein C10 Coiled PF05710.12 ORF114822 - 0.0043 17.8 0.4 0.0064 17.3 0.4 1.3 1 0 0 1 1 1 1 Coiled coil MIIP PF15734.5 ORF114822 - 0.029 13.9 0.3 0.52 9.7 0.1 2.0 1 1 1 2 2 2 0 Migration and invasion-inhibitory CS PF04969.16 ORF114711 - 5.5e-08 33.7 9.1 1.1e-07 32.7 9.1 1.5 1 1 0 1 1 1 1 CS domain RepA_N PF06970.11 ORF114711 - 0.21 11.5 3.7 8.5 6.4 0.3 2.3 1 1 1 2 2 2 0 Replication initiator protein A (RepA) N-terminus FYRN PF05964.14 ORF114393 - 0.27 11.1 0.2 0.27 11.1 0.2 1.8 2 0 0 2 2 2 0 F/Y-rich N-terminus DUF3418 PF11898.8 ORF113834 - 0.021 13.6 0.0 0.023 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) DUF4179 PF13786.6 ORF11345 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF11345 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF11345 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF11345 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus LELP1 PF15042.6 ORF112790 - 0.07 13.5 3.9 0.094 13.1 3.9 1.2 1 0 0 1 1 1 0 Late cornified envelope-like proline-rich protein 1 SH3_9 PF14604.6 ORF112568 - 0.0033 17.3 0.3 0.01 15.7 0.3 1.8 1 1 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF112568 - 0.021 14.4 2.0 0.085 12.5 0.4 2.5 2 1 0 2 2 2 0 SH3 domain DUF4179 PF13786.6 ORF109998 - 0.019 15.4 0.5 0.024 15.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF5305 PF17231.2 ORF109998 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Pterin_4a PF01329.19 ORF109998 - 0.067 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Pterin 4 alpha carbinolamine dehydratase vWA-TerF-like PF10138.9 ORF109998 - 0.085 13.0 0.4 0.1 12.7 0.4 1.1 1 0 0 1 1 1 0 vWA found in TerF C terminus DUF420 PF04238.12 ORF109262 - 0.035 14.4 4.3 0.046 14.0 4.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF420) DOPA_dioxygen PF08883.11 ORF108829 - 0.038 14.2 0.0 0.054 13.7 0.0 1.2 1 0 0 1 1 1 0 Dopa 4,5-dioxygenase family DUF3281 PF11685.8 ORF107240 - 0.0074 15.7 0.1 0.0078 15.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3281) eRF1_2 PF03464.15 ORF107240 - 0.073 13.4 2.8 0.075 13.3 1.9 1.5 1 1 1 2 2 2 0 eRF1 domain 2 Neuroparsin PF07327.11 ORF105683 - 0.014 15.8 1.2 5.3 7.5 0.0 2.1 1 1 1 2 2 2 0 Neuroparsin DUF469 PF04320.14 ORF105683 - 0.12 13.2 0.0 0.2 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein with unknown function (DUF469) NICE-1 PF15845.5 ORF105416 - 0.21 12.4 4.5 0.39 11.5 4.5 1.4 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family Fam20C PF06702.12 ORF103196 - 0.13 12.1 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Golgi casein kinase, C-terminal, Fam20 RmuC PF02646.16 ORF102531 - 0.021 14.0 0.0 0.027 13.6 0.0 1.1 1 0 0 1 1 1 0 RmuC family OmdA PF13376.6 ORF102531 - 0.03 14.3 0.1 0.051 13.6 0.1 1.5 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated DUF3687 PF12459.8 ORF102110 - 0.0045 16.5 0.7 0.0045 16.5 0.7 2.3 3 0 0 3 3 3 1 D-Ala-teichoic acid biosynthesis protein Pkinase PF00069.25 ORF101819 - 1.6e-05 24.4 0.0 2.4e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain TnpW PF14202.6 ORF101819 - 0.037 13.8 3.6 0.12 12.2 0.6 2.4 2 0 0 2 2 2 0 Transposon-encoded protein TnpW FlbD PF06289.11 ORF101819 - 0.044 13.4 0.2 5.2 6.7 0.1 2.3 2 0 0 2 2 2 0 Flagellar and Swarming motility proteins ATP_sub_h PF10775.9 ORF101483 - 5.1 7.2 7.7 1.4 9.0 1.6 2.3 2 0 0 2 2 2 0 ATP synthase complex subunit h IlvN PF07991.12 ORF101182 - 0.18 11.4 0.0 0.24 10.9 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Peptidase_C8 PF03569.13 NODE_51250_length_355_cov_1.312500_g43340_i0reverse_frame_1 - 0.078 12.5 0.0 0.098 12.2 0.0 1.1 1 0 0 1 1 1 0 Peptidase family C8 Macro PF01661.21 NODE_51245_length_355_cov_1.618750_g43335_i0forward_frame_1 - 0.043 13.9 0.1 0.086 12.9 0.1 1.5 1 0 0 1 1 1 0 Macro domain TctA PF01970.16 NODE_51237_length_355_cov_1.940625_g43327_i0forward_frame_1 - 3 6.5 7.0 3.6 6.2 7.0 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks220.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks220.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks220.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks220.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_1 PF07690.16 NODE_51229_length_355_cov_2.318750_g43319_i0forward_frame_1 - 5.3e-06 25.6 1.1 5.9e-06 25.4 1.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4528 PF15031.6 NODE_51229_length_355_cov_2.318750_g43319_i0forward_frame_1 - 0.067 13.2 0.0 0.093 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) LacI PF00356.21 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.0021 17.8 0.4 0.004 16.9 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family GerE PF00196.19 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.021 14.3 0.1 0.062 12.8 0.1 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_36 PF13730.6 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.032 14.2 0.0 0.057 13.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.042 13.3 0.1 0.26 10.7 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Ubiquitin_5 PF18037.1 NODE_51227_length_355_cov_2.440625_g43317_i0forward_frame_1 - 0.048 14.0 0.1 0.065 13.6 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin-like domain TRAM_LAG1_CLN8 PF03798.16 NODE_51226_length_355_cov_2.490625_g43316_i0reverse_frame_1 - 0.034 13.9 0.2 0.039 13.7 0.2 1.2 1 0 0 1 1 1 0 TLC domain DUF760 PF05542.11 NODE_51226_length_355_cov_2.490625_g43316_i0reverse_frame_1 - 0.14 12.5 0.9 6.6 7.2 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF760) YfhO PF09586.10 NODE_51226_length_355_cov_2.490625_g43316_i0forward_frame_1 - 0.73 8.0 5.8 0.84 7.8 5.8 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF3179 PF11376.8 NODE_51222_length_355_cov_2.865625_g43312_i0reverse_frame_1 - 0.031 13.6 0.0 0.043 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3179) MitoNEET_N PF10660.9 NODE_51220_length_355_cov_3.021875_g43310_i0forward_frame_1 - 0.056 13.5 0.4 0.14 12.2 0.0 1.9 3 0 0 3 3 3 0 Iron-containing outer mitochondrial membrane protein N-terminus zf-TRM13_CCCH PF11722.8 NODE_51208_length_355_cov_5.950000_g43298_i0forward_frame_1 - 4.7 7.1 7.6 2.4 8.0 0.3 2.8 4 0 0 4 4 4 0 CCCH zinc finger in TRM13 protein Phage_Arf PF17585.2 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_1 - 0.24 11.4 0.0 26 4.9 0.0 2.1 2 0 0 2 2 2 0 Accessory recombination function protein Dickkopf_N PF04706.12 NODE_51205_length_355_cov_37.112500_g43295_i0forward_frame_1 - 0.25 11.8 1.5 17 6.0 0.0 2.6 3 0 0 3 3 3 0 Dickkopf N-terminal cysteine-rich region Dickkopf_N PF04706.12 NODE_51204_length_355_cov_37.487500_g43294_i0forward_frame_1 - 0.17 12.4 1.7 17 6.0 0.0 2.8 3 0 0 3 3 3 0 Dickkopf N-terminal cysteine-rich region Cadherin_C_2 PF16492.5 NODE_51204_length_355_cov_37.487500_g43294_i0forward_frame_1 - 1.2 10.0 3.6 3.5 8.4 0.5 2.1 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal zf-RING_6 PF14835.6 NODE_51177_length_355_cov_110.481250_g43267_i0reverse_frame_1 - 0.015 15.1 0.5 0.026 14.4 0.5 1.4 1 0 0 1 1 1 0 zf-RING of BARD1-type protein DUF3501 PF12007.8 NODE_51175_length_355_cov_121.278125_g43265_i0reverse_frame_1 - 0.065 13.2 0.0 0.08 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3501) DUF4266 PF14086.6 NODE_51175_length_355_cov_121.278125_g43265_i0forward_frame_1 - 1.6 9.8 6.7 5 8.1 3.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4266) Pox_A30L_A26L PF06086.12 NODE_51174_length_355_cov_147.140625_g43264_i0reverse_frame_1 - 0.091 12.4 1.9 0.1 12.3 1.1 1.5 1 1 1 2 2 2 0 Orthopoxvirus A26L/A30L protein DUF3618 PF12277.8 NODE_51173_length_355_cov_149.743750_g43263_i0reverse_frame_1 - 0.2 12.0 0.9 0.2 12.0 0.9 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3618) Myc_target_1 PF15179.6 NODE_51173_length_355_cov_149.743750_g43263_i0forward_frame_1 - 0.05 13.5 0.1 0.062 13.2 0.1 1.1 1 0 0 1 1 1 0 Myc target protein 1 NdhL PF10716.9 NODE_51165_length_355_cov_709.593750_g43255_i0reverse_frame_1 - 0.06 13.3 0.5 0.46 10.5 0.0 2.2 2 0 0 2 2 2 0 NADH dehydrogenase transmembrane subunit Thiolase_C PF02803.18 NODE_51160_length_355_cov_3512.378125_g43251_i0forward_frame_1 - 0.15 11.7 1.0 0.22 11.2 1.0 1.3 1 0 0 1 1 1 0 Thiolase, C-terminal domain AreA_N PF07573.11 NODE_51154_length_356_cov_1.467290_g43245_i0reverse_frame_1 - 0.067 13.8 0.5 0.12 13.0 0.5 1.4 1 0 0 1 1 1 0 Nitrogen regulatory protein AreA N terminus NUDIX PF00293.28 NODE_51146_length_356_cov_1.990654_g43237_i0reverse_frame_1 - 9.9e-10 38.6 0.0 1.1e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain LcnG-beta PF11632.8 NODE_51145_length_356_cov_2.049844_g43236_i0reverse_frame_1 - 0.14 12.1 0.2 0.23 11.4 0.2 1.3 1 0 0 1 1 1 0 Lactococcin G-beta DUF5336 PF17270.2 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_1 - 0.0069 16.0 0.5 0.009 15.7 0.5 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5336) DUF4781 PF16013.5 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_1 - 0.017 13.9 0.2 0.019 13.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) DUF3290 PF11694.8 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_1 - 0.02 14.9 1.0 0.025 14.6 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DUF2207 PF09972.9 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_1 - 0.021 13.6 1.1 0.024 13.4 1.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ferlin_C PF16165.5 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_1 - 1.7 8.6 4.4 1 9.3 2.9 1.5 1 1 0 1 1 1 0 Ferlin C-terminus Glyco_transf_5 PF08323.11 NODE_51117_length_356_cov_3.174455_g43208_i0reverse_frame_1 - 0.074 12.7 0.0 0.088 12.5 0.0 1.2 1 0 0 1 1 1 0 Starch synthase catalytic domain Mre11_DNA_bind PF04152.14 NODE_51117_length_356_cov_3.174455_g43208_i0reverse_frame_1 - 0.15 12.4 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Mre11 DNA-binding presumed domain Na_H_Exchanger PF00999.21 NODE_51117_length_356_cov_3.174455_g43208_i0forward_frame_1 - 4.6e-11 42.1 3.1 5.5e-11 41.9 3.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family MFS_1_like PF12832.7 NODE_51108_length_356_cov_50.498442_g43199_i0reverse_frame_1 - 0.0067 15.3 0.1 0.0073 15.2 0.1 1.0 1 0 0 1 1 1 1 MFS_1 like family DUF3397 PF11877.8 NODE_51104_length_356_cov_58.953271_g43195_i0forward_frame_1 - 0.22 11.7 6.1 0.31 11.3 6.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3397) Ins145_P3_rec PF08709.11 NODE_51102_length_356_cov_61.697819_g43193_i0forward_frame_1 - 2.1e-08 33.6 0.0 2.6e-08 33.3 0.0 1.0 1 0 0 1 1 1 1 Inositol 1,4,5-trisphosphate/ryanodine receptor DUF3364 PF11844.8 NODE_51102_length_356_cov_61.697819_g43193_i0forward_frame_1 - 0.013 15.7 0.0 0.025 14.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) 7TMR-HDED PF07697.11 NODE_51102_length_356_cov_61.697819_g43193_i0forward_frame_1 - 0.14 12.2 0.8 0.19 11.8 0.8 1.1 1 0 0 1 1 1 0 7TM-HD extracellular AvrE_T3Es PF11725.8 NODE_51091_length_356_cov_86.211838_g43182_i0reverse_frame_1 - 0.029 11.6 0.1 0.035 11.4 0.1 1.0 1 0 0 1 1 1 0 AvrE-family Type-III effector proteins (T3Es) 2OG-FeII_Oxy_3 PF13640.6 NODE_51086_length_356_cov_96.869159_g43177_i0reverse_frame_1 - 0.066 14.1 0.0 0.1 13.5 0.0 1.3 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily DUF782 PF05614.11 NODE_51086_length_356_cov_96.869159_g43177_i0forward_frame_1 - 0.023 15.1 0.0 0.034 14.5 0.0 1.3 1 1 0 1 1 1 0 Circovirus protein of unknown function (DUF782) zf_UBZ PF18439.1 NODE_51086_length_356_cov_96.869159_g43177_i0forward_frame_1 - 3.5 7.3 7.1 0.44 10.2 3.2 1.6 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Suppressor_APC PF11414.8 NODE_51083_length_356_cov_100.510903_g43174_i0reverse_frame_1 - 0.0075 16.3 1.5 0.018 15.1 1.1 1.7 1 1 1 2 2 2 1 Adenomatous polyposis coli tumour suppressor protein YafO_toxin PF13957.6 NODE_51083_length_356_cov_100.510903_g43174_i0reverse_frame_1 - 0.4 10.8 3.5 1.2 9.2 3.2 1.9 1 1 1 2 2 2 0 Toxin YafO, type II toxin-antitoxin system DUF2451 PF10474.9 NODE_51074_length_356_cov_119.099688_g43165_i0reverse_frame_1 - 8.3e-06 25.7 0.1 1.3e-05 25.1 0.1 1.5 1 1 0 1 1 1 1 Protein of unknown function C-terminus (DUF2451) Toxin_GhoT_OrtT PF10753.9 NODE_51053_length_357_cov_1.602484_g43145_i0reverse_frame_1 - 0.027 14.7 2.3 0.062 13.5 2.3 1.5 1 0 0 1 1 1 0 Toxin GhoT_OrtT TcA_RBD PF18518.1 NODE_51053_length_357_cov_1.602484_g43145_i0forward_frame_1 - 0.053 13.8 0.2 0.066 13.5 0.2 1.2 1 0 0 1 1 1 0 TcA receptor binding domain Frag1 PF10277.9 NODE_51046_length_357_cov_2.086957_g43138_i0reverse_frame_1 - 0.019 14.5 0.4 0.024 14.2 0.4 1.2 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family MLVIN_C PF18697.1 NODE_51041_length_357_cov_2.583851_g43133_i0reverse_frame_1 - 0.057 13.5 0.1 0.1 12.7 0.1 1.5 1 0 0 1 1 1 0 Murine leukemia virus (MLV) integrase (IN) C-terminal domain M64_N PF16217.5 NODE_51040_length_357_cov_2.956522_g43132_i0reverse_frame_1 - 0.07 12.7 0.0 0.59 9.7 0.0 1.9 2 0 0 2 2 2 0 Peptidase M64 N-terminus Alba PF01918.21 NODE_51037_length_357_cov_3.245342_g43129_i0forward_frame_1 - 4.3e-05 23.3 0.1 6e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Alba PT PF04886.12 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_1 - 0.98 9.0 22.9 2.9 7.5 6.1 3.9 1 1 1 2 2 2 0 PT repeat CAML PF14963.6 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_1 - 3.5 7.7 8.6 4 7.5 8.6 1.0 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand FAM60A PF15396.6 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_1 - 4 7.4 11.1 4.9 7.1 11.1 1.1 1 0 0 1 1 1 0 Protein Family FAM60A Smg8_Smg9 PF10220.9 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_1 - 8.1 4.6 12.8 8.7 4.5 12.8 1.0 1 0 0 1 1 1 0 Smg8_Smg9 SNURF PF07192.11 NODE_51025_length_357_cov_9.891304_g43117_i0reverse_frame_1 - 0.13 12.1 8.0 9.6 6.1 0.1 3.4 2 1 1 3 3 3 0 SNURF/RPN4 protein bZIP_1 PF00170.21 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.0012 18.9 0.3 0.0012 18.9 0.3 2.1 2 0 0 2 2 2 1 bZIP transcription factor ZapB PF06005.12 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.013 15.9 0.3 0.02 15.3 0.3 1.3 1 0 0 1 1 1 0 Cell division protein ZapB GIT_CC PF16559.5 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.017 15.0 1.6 0.034 14.0 1.5 1.5 1 1 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor Snapin_Pallidin PF14712.6 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.024 15.1 1.2 0.034 14.6 1.2 1.3 1 0 0 1 1 1 0 Snapin/Pallidin Vip3A_N PF12495.8 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.047 13.6 0.3 0.064 13.2 0.3 1.2 1 0 0 1 1 1 0 Vegetative insecticide protein 3A N terminal LPP PF04728.13 NODE_51022_length_357_cov_20.403727_g43114_i0reverse_frame_1 - 0.074 13.5 2.6 0.34 11.3 0.6 2.2 1 1 1 2 2 2 0 Lipoprotein leucine-zipper PilW PF16074.5 NODE_51013_length_357_cov_68.431677_g43105_i0reverse_frame_1 - 0.06 13.4 0.0 0.11 12.5 0.0 1.4 1 1 1 2 2 2 0 Type IV Pilus-assembly protein W PspB PF06667.12 NODE_51013_length_357_cov_68.431677_g43105_i0reverse_frame_1 - 0.076 13.1 0.5 0.31 11.1 0.4 1.9 1 1 0 1 1 1 0 Phage shock protein B CTV_P33 PF07184.11 NODE_51009_length_357_cov_78.052795_g43101_i0reverse_frame_1 - 0.057 12.5 0.2 0.078 12.0 0.2 1.2 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein IL17 PF06083.11 NODE_50995_length_357_cov_135.788820_g43087_i0forward_frame_1 - 0.14 12.6 4.5 0.12 12.9 2.6 1.7 1 1 1 2 2 2 0 Interleukin-17 zf-Tim10_DDP PF02953.15 NODE_50991_length_357_cov_302.928571_g43083_i0forward_frame_1 - 0.0011 18.5 5.9 0.0011 18.5 5.9 2.1 1 1 1 2 2 2 1 Tim10/DDP family zinc finger XRCC4 PF06632.12 NODE_50981_length_358_cov_1.504644_g43075_i0reverse_frame_2 - 0.063 12.1 0.1 0.072 11.9 0.1 1.1 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 SNase PF00565.17 NODE_50978_length_358_cov_1.715170_g43072_i0reverse_frame_3 - 1.9e-06 28.3 0.0 2.5e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Staphylococcal nuclease homologue SRP54_N PF02881.19 NODE_50977_length_358_cov_1.733746_g43071_i0forward_frame_3 - 0.16 12.2 4.5 0.098 12.9 2.4 1.7 2 0 0 2 2 2 0 SRP54-type protein, helical bundle domain Neur_chan_memb PF02932.16 NODE_50975_length_358_cov_1.832817_g43069_i0forward_frame_3 - 5.8 6.9 5.1 6.2 6.8 5.1 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region SecM PF06558.12 NODE_50974_length_358_cov_1.842105_g43068_i0reverse_frame_3 - 0.18 11.9 0.2 0.25 11.4 0.2 1.1 1 0 0 1 1 1 0 Secretion monitor precursor protein (SecM) CRM1_repeat_3 PF18787.1 NODE_50974_length_358_cov_1.842105_g43068_i0reverse_frame_3 - 0.35 11.0 0.1 0.35 11.0 0.1 2.5 4 0 0 4 4 4 0 CRM1 / Exportin repeat 3 TMEM43 PF07787.12 NODE_50974_length_358_cov_1.842105_g43068_i0reverse_frame_3 - 0.93 8.8 3.5 1.2 8.5 3.5 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 EAV_GP5 PF15981.5 NODE_50973_length_358_cov_2.030960_g43067_i0forward_frame_3 - 2.4 8.6 9.8 0.11 12.9 3.2 2.2 1 1 1 2 2 2 0 Envelope glycoprotein GP 5 of equine arteritis virus TMEM101 PF15111.6 NODE_50972_length_358_cov_2.074303_g43066_i0forward_frame_2 - 0.062 12.8 0.0 0.07 12.7 0.0 1.1 1 0 0 1 1 1 0 TMEM101 protein family MFS18 PF17352.2 NODE_50972_length_358_cov_2.074303_g43066_i0forward_frame_2 - 0.26 11.7 2.5 0.33 11.4 2.5 1.2 1 0 0 1 1 1 0 Male Flower Specific protein 18 Fer4_20 PF14691.6 NODE_50969_length_358_cov_2.133127_g43063_i0forward_frame_3 - 0.11 12.3 5.8 0.08 12.7 4.1 1.6 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DDE_Tnp_1_6 PF13751.6 NODE_50969_length_358_cov_2.133127_g43063_i0forward_frame_2 - 0.04 14.2 3.3 0.058 13.6 3.3 1.2 1 0 0 1 1 1 0 Transposase DDE domain Peptidase_M4_C PF02868.15 NODE_50969_length_358_cov_2.133127_g43063_i0forward_frame_2 - 0.041 13.8 0.0 0.049 13.5 0.0 1.2 1 0 0 1 1 1 0 Thermolysin metallopeptidase, alpha-helical domain UPF0179 PF03684.13 NODE_50969_length_358_cov_2.133127_g43063_i0forward_frame_2 - 0.063 13.2 0.7 0.079 12.8 0.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0179) Sugar_tr PF00083.24 NODE_50966_length_358_cov_2.173375_g43060_i0reverse_frame_3 - 5.7e-10 38.6 4.7 6.5e-10 38.5 4.7 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_50966_length_358_cov_2.173375_g43060_i0reverse_frame_3 - 3.7e-06 26.1 3.8 4.5e-06 25.8 3.8 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_50965_length_358_cov_2.263158_g43059_i0forward_frame_3 - 6e-06 25.4 0.1 2.3e-05 23.5 0.1 1.7 1 1 0 1 1 1 1 Sugar (and other) transporter HR1 PF02185.16 NODE_50963_length_358_cov_2.362229_g43057_i0forward_frame_2 - 0.074 13.2 0.1 0.097 12.8 0.1 1.3 1 0 0 1 1 1 0 Hr1 repeat Thymosin PF01290.20 NODE_50962_length_358_cov_2.430341_g43056_i0forward_frame_2 - 0.025 14.3 0.1 0.69 9.7 0.0 2.2 2 0 0 2 2 2 0 Thymosin beta-4 family FERM_N_2 PF18038.1 NODE_50960_length_358_cov_2.755418_g43054_i0reverse_frame_2 - 0.12 13.2 0.0 0.19 12.6 0.0 1.3 1 0 0 1 1 1 0 FERM N-terminal domain DUF4027 PF13219.6 NODE_50958_length_358_cov_2.876161_g43052_i0reverse_frame_3 - 0.12 12.2 1.8 0.22 11.4 1.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4027) Mob1_phocein PF03637.17 NODE_50957_length_358_cov_3.074303_g43051_i0reverse_frame_2 - 1 9.4 5.8 1.6 8.7 5.8 1.2 1 0 0 1 1 1 0 Mob1/phocein family GMP_synt_C PF00958.22 NODE_50955_length_358_cov_3.281734_g43049_i0forward_frame_2 - 1e-34 118.5 0.0 1.3e-34 118.1 0.0 1.1 1 0 0 1 1 1 1 GMP synthase C terminal domain DUF5051 PF16473.5 NODE_50955_length_358_cov_3.281734_g43049_i0forward_frame_2 - 0.038 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 3' exoribonuclease, RNase T-like YabA PF06156.13 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.016 15.8 11.5 0.093 13.4 6.3 2.1 1 1 1 2 2 2 0 Initiation control protein YabA KASH_CCD PF14662.6 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.032 14.1 14.6 0.042 13.7 14.6 1.2 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH bZIP_1 PF00170.21 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.22 11.6 16.9 0.82 9.8 1.5 2.4 1 1 0 2 2 2 0 bZIP transcription factor ZapB PF06005.12 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.25 11.8 15.5 0.86 10.1 2.1 3.0 1 1 1 2 2 2 0 Cell division protein ZapB Cep57_CLD_2 PF14197.6 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 0.35 11.0 9.6 7.7 6.7 8.3 2.8 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 UPF0242 PF06785.11 NODE_50946_length_358_cov_47.356037_g43040_i0reverse_frame_3 - 2.1 8.4 14.9 1.1 9.3 3.1 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus CcmE PF03100.15 NODE_50941_length_358_cov_65.439628_g43035_i0forward_frame_3 - 0.79 9.7 3.6 0.63 10.0 0.9 2.1 1 1 2 3 3 3 0 CcmE DUF2070 PF09843.9 NODE_50941_length_358_cov_65.439628_g43035_i0forward_frame_3 - 1.9 6.7 7.9 2.1 6.5 7.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Herpes_LMP1 PF05297.11 NODE_50941_length_358_cov_65.439628_g43035_i0forward_frame_3 - 2.9 7.0 8.6 3.3 6.8 8.6 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF2628 PF10947.8 NODE_50941_length_358_cov_65.439628_g43035_i0forward_frame_3 - 3.8 7.9 8.8 5.1 7.5 8.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) MSA-2c PF12238.8 NODE_50936_length_358_cov_92.201238_g43030_i0reverse_frame_3 - 0.39 10.7 1.3 0.43 10.5 1.3 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c TIL PF01826.17 NODE_50928_length_358_cov_130.281734_g43022_i0forward_frame_3 - 0.026 14.8 0.3 0.074 13.3 0.3 1.8 1 1 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain SPO11_like PF03533.14 NODE_50928_length_358_cov_130.281734_g43022_i0forward_frame_2 - 0.01 15.9 0.0 0.043 13.9 0.0 1.9 2 0 0 2 2 2 0 SPO11 homologue Cytochrom_C1 PF02167.15 NODE_50926_length_358_cov_152.563467_g43020_i0forward_frame_2 - 0.054 13.2 0.0 0.06 13.1 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C1 family zf-IS66 PF13005.7 NODE_50925_length_358_cov_176.012384_g43019_i0reverse_frame_3 - 2.4 8.6 9.0 80 3.8 9.0 2.4 1 1 0 1 1 1 0 zinc-finger binding domain of transposase IS66 zf-CCCH_2 PF14608.6 NODE_50925_length_358_cov_176.012384_g43019_i0reverse_frame_2 - 0.002 18.5 0.6 2.5 8.7 0.0 3.0 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger zf-CCCH PF00642.24 NODE_50925_length_358_cov_176.012384_g43019_i0reverse_frame_2 - 0.012 15.5 3.4 0.36 10.8 0.1 2.9 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_50925_length_358_cov_176.012384_g43019_i0reverse_frame_2 - 2.1 8.2 9.5 0.3 10.9 0.4 3.1 3 0 0 3 3 3 0 CCCH-type zinc finger zf-TRAF PF02176.18 NODE_50925_length_358_cov_176.012384_g43019_i0forward_frame_2 - 0.29 11.9 4.8 2.7 8.8 1.1 2.2 2 0 0 2 2 2 0 TRAF-type zinc finger Adipogenin PF15202.6 NODE_50919_length_358_cov_245.606811_g43013_i0reverse_frame_3 - 1.6 8.8 5.4 0.21 11.6 0.6 1.8 1 1 1 2 2 2 0 Adipogenin PsbK PF02533.15 NODE_50912_length_358_cov_629.941176_g43007_i0reverse_frame_2 - 2.5e-20 72.3 6.4 3.8e-20 71.8 6.4 1.2 1 0 0 1 1 1 1 Photosystem II 4 kDa reaction centre component VasI PF11319.8 NODE_50912_length_358_cov_629.941176_g43007_i0forward_frame_2 - 0.046 13.4 1.1 0.057 13.1 1.1 1.1 1 0 0 1 1 1 0 Type VI secretion system VasI, EvfG, VC_A0118 Tfb4 PF03850.14 NODE_50906_length_359_cov_1.336420_g43001_i0reverse_frame_3 - 0.015 14.9 1.8 0.016 14.7 1.8 1.0 1 0 0 1 1 1 0 Transcription factor Tfb4 COX5A PF02284.16 NODE_50906_length_359_cov_1.336420_g43001_i0reverse_frame_2 - 0.0051 16.8 0.0 0.0067 16.4 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c oxidase subunit Va Retrotrans_gag PF03732.17 NODE_50904_length_359_cov_1.549383_g42999_i0reverse_frame_3 - 0.09 13.1 0.1 0.16 12.2 0.1 1.4 1 0 0 1 1 1 0 Retrotransposon gag protein MRF_C2 PF13888.6 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_3 - 0.029 14.3 0.3 0.035 14.0 0.3 1.1 1 0 0 1 1 1 0 Myelin gene regulatory factor C-terminal domain 2 BAT2_N PF07001.11 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_3 - 0.074 13.5 1.6 0.079 13.4 1.6 1.1 1 0 0 1 1 1 0 BAT2 N-terminus Tir_receptor_C PF07489.11 NODE_50902_length_359_cov_1.685185_g42997_i0reverse_frame_3 - 0.57 10.1 10.2 0.78 9.7 10.2 1.3 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) C-terminus DUF2207 PF09972.9 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_3 - 5.7 5.6 5.7 6.1 5.5 5.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Wzy_C PF04932.15 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 0.08 12.6 2.2 0.12 12.0 2.2 1.2 1 0 0 1 1 1 0 O-Antigen ligase Amnionless PF14828.6 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 0.2 10.4 3.9 0.21 10.4 3.9 1.1 1 0 0 1 1 1 0 Amnionless G3P_acyltransf PF02660.15 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 0.24 11.5 9.3 0.28 11.2 9.3 1.2 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase Cyt_bd_oxida_II PF02322.15 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 1.5 8.1 16.7 1.6 8.0 16.7 1.0 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit II TMEM154 PF15102.6 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 1.8 8.4 7.8 2.5 8.0 7.8 1.2 1 0 0 1 1 1 0 TMEM154 protein family Baculo_11_kDa PF06143.11 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 2.2 7.9 11.8 3.3 7.4 11.8 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family PMT_4TMC PF16192.5 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 2.3 7.7 5.2 3.1 7.3 5.2 1.1 1 0 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase Shisa PF13908.6 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 8.9 6.5 9.5 12 6.1 9.5 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Tmemb_9 PF05434.11 NODE_50902_length_359_cov_1.685185_g42997_i0forward_frame_2 - 9.2 6.1 8.8 12 5.7 8.8 1.1 1 0 0 1 1 1 0 TMEM9 Yippee-Mis18 PF03226.14 NODE_50900_length_359_cov_1.712963_g42995_i0reverse_frame_2 - 0.079 13.2 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Pkinase PF00069.25 NODE_50900_length_359_cov_1.712963_g42995_i0forward_frame_3 - 4.4e-37 127.9 0.0 4.9e-37 127.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_50900_length_359_cov_1.712963_g42995_i0forward_frame_3 - 3.1e-15 56.2 0.0 3.8e-15 55.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_50900_length_359_cov_1.712963_g42995_i0forward_frame_3 - 0.053 12.3 0.0 0.063 12.1 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase Kinase-like PF14531.6 NODE_50900_length_359_cov_1.712963_g42995_i0forward_frame_3 - 0.053 12.8 0.0 0.069 12.5 0.0 1.3 1 1 0 1 1 1 0 Kinase-like NECFESHC PF16621.5 NODE_50891_length_359_cov_1.956790_g42986_i0forward_frame_2 - 0.016 15.2 0.7 0.62 10.1 0.0 2.3 2 0 0 2 2 2 0 SH3 terminal domain of 2nd SH3 on Neutrophil cytosol factor 1 Aminotran_1_2 PF00155.21 NODE_50885_length_359_cov_2.314815_g42980_i0forward_frame_2 - 9.9e-11 41.4 0.0 1.2e-10 41.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II HeH PF12949.7 NODE_50885_length_359_cov_2.314815_g42980_i0forward_frame_2 - 0.11 12.3 0.1 0.24 11.1 0.1 1.6 1 0 0 1 1 1 0 HeH/LEM domain Aminotran_MocR PF12897.7 NODE_50885_length_359_cov_2.314815_g42980_i0forward_frame_2 - 0.18 10.5 0.0 0.21 10.3 0.0 1.0 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase DUF5320 PF17253.2 NODE_50877_length_359_cov_2.962963_g42972_i0reverse_frame_3 - 0.57 11.3 2.8 0.77 10.9 2.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5320) Trypan_PARP PF05887.11 NODE_50871_length_359_cov_4.024691_g42966_i0reverse_frame_3 - 0.012 15.6 1.1 0.015 15.3 1.1 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Peptidase_C93 PF06035.11 NODE_50870_length_359_cov_5.614198_g42965_i0forward_frame_3 - 0.027 14.3 0.1 0.033 14.0 0.1 1.1 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP TauE PF01925.19 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 0.0013 18.4 4.9 0.0049 16.5 5.1 1.7 1 1 0 1 1 1 1 Sulfite exporter TauE/SafE Adeno_E3B PF03376.14 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 0.27 11.5 8.1 1.2 9.5 1.4 2.4 2 0 0 2 2 2 0 Adenovirus E3B protein Chitin_synth_2 PF03142.15 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 0.53 8.8 6.5 0.61 8.6 6.5 1.0 1 0 0 1 1 1 0 Chitin synthase DUF4282 PF14110.6 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 0.69 10.7 9.5 1.2 10.0 9.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4282) Pox_A14 PF05767.12 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 0.79 9.9 10.1 0.57 10.4 8.8 1.5 1 1 0 1 1 1 0 Poxvirus virion envelope protein A14 ALMT PF11744.8 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 1.2 7.9 8.3 1.3 7.7 8.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF3290 PF11694.8 NODE_50869_length_359_cov_11.500000_g42964_i0reverse_frame_3 - 4.1 7.4 7.9 5.2 7.0 6.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3290) Kei1 PF08552.11 NODE_50869_length_359_cov_11.500000_g42964_i0forward_frame_2 - 0.13 12.1 1.1 0.16 11.8 1.1 1.2 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 Actino_peptide PF14408.6 NODE_50866_length_359_cov_28.444444_g42961_i0forward_frame_2 - 0.0032 17.5 0.2 0.0046 17.0 0.2 1.2 1 0 0 1 1 1 1 Ribosomally synthesised peptide in actinomycetes Trypan_PARP PF05887.11 NODE_50864_length_359_cov_48.407407_g42959_i0reverse_frame_3 - 1.4 8.9 5.1 1.6 8.7 5.1 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) NPR3 PF03666.13 NODE_50864_length_359_cov_48.407407_g42959_i0reverse_frame_3 - 6.6 5.4 9.3 6.4 5.4 9.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 PPR_2 PF13041.6 NODE_50856_length_359_cov_68.163580_g42951_i0reverse_frame_3 - 3.9e-08 33.3 0.0 0.0014 18.8 0.0 2.3 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_50856_length_359_cov_68.163580_g42951_i0reverse_frame_3 - 1.3e-07 31.6 0.0 0.0074 16.3 0.0 2.2 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 NODE_50856_length_359_cov_68.163580_g42951_i0reverse_frame_3 - 9.6e-06 25.5 0.9 0.3 11.4 0.0 3.7 3 1 0 3 3 3 2 PPR repeat PPR_1 PF12854.7 NODE_50856_length_359_cov_68.163580_g42951_i0reverse_frame_3 - 1.2e-05 24.9 0.0 0.44 10.3 0.0 3.4 3 0 0 3 3 3 2 PPR repeat PPR_long PF17177.4 NODE_50856_length_359_cov_68.163580_g42951_i0reverse_frame_3 - 0.046 13.1 0.0 0.057 12.8 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP NCOA_u2 PF16665.5 NODE_50856_length_359_cov_68.163580_g42951_i0forward_frame_3 - 0.02 15.2 0.1 0.029 14.7 0.1 1.2 1 0 0 1 1 1 0 Unstructured region on nuclear receptor coactivator protein DUF1367 PF07105.11 NODE_50853_length_359_cov_77.722222_g42948_i0reverse_frame_2 - 0.11 12.1 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1367) TOBE_3 PF12857.7 NODE_50852_length_359_cov_78.287037_g42947_i0reverse_frame_2 - 0.18 11.7 0.3 0.36 10.8 0.1 1.6 2 0 0 2 2 2 0 TOBE-like domain Fijivirus_P9-2 PF06837.11 NODE_50852_length_359_cov_78.287037_g42947_i0forward_frame_3 - 2.8 7.3 12.9 3.4 7.1 12.9 1.2 1 0 0 1 1 1 0 Fijivirus P9-2 protein ubiquitin PF00240.23 NODE_50851_length_359_cov_78.524691_g42946_i0forward_frame_3 - 6.5e-06 25.8 0.1 1.3e-05 24.8 0.1 1.5 1 1 0 1 1 1 1 Ubiquitin family TNF PF00229.18 NODE_50851_length_359_cov_78.524691_g42946_i0forward_frame_3 - 0.035 14.0 0.1 0.26 11.3 0.0 1.9 1 1 0 2 2 2 0 TNF(Tumour Necrosis Factor) family Rad60-SLD_2 PF13881.6 NODE_50851_length_359_cov_78.524691_g42946_i0forward_frame_3 - 0.15 12.2 0.1 0.53 10.4 0.1 1.8 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like DUF4065 PF13274.6 NODE_50849_length_359_cov_79.768519_g42944_i0reverse_frame_2 - 0.21 12.5 6.0 0.37 11.7 5.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) Connexin PF00029.19 NODE_50849_length_359_cov_79.768519_g42944_i0reverse_frame_2 - 0.57 9.9 5.0 0.68 9.6 5.0 1.1 1 0 0 1 1 1 0 Connexin DUF2244 PF10003.9 NODE_50849_length_359_cov_79.768519_g42944_i0forward_frame_3 - 2 8.1 5.4 2.9 7.6 5.4 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) DUF2207 PF09972.9 NODE_50849_length_359_cov_79.768519_g42944_i0forward_frame_3 - 8.2 5.1 6.0 8.9 4.9 6.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) SUR7 PF06687.12 NODE_50849_length_359_cov_79.768519_g42944_i0forward_frame_2 - 0.066 12.8 16.6 0.084 12.5 16.6 1.1 1 0 0 1 1 1 0 SUR7/PalI family Clathrin PF00637.20 NODE_50843_length_359_cov_89.938272_g42938_i0forward_frame_3 - 0.0035 17.2 0.0 0.77 9.6 0.0 2.1 1 1 1 2 2 2 2 Region in Clathrin and VPS TPR_19 PF14559.6 NODE_50843_length_359_cov_89.938272_g42938_i0forward_frame_3 - 0.02 15.4 0.2 8.7 6.9 0.1 3.1 2 1 0 2 2 2 0 Tetratricopeptide repeat Mfa_like_2 PF15415.6 NODE_50843_length_359_cov_89.938272_g42938_i0forward_frame_3 - 0.14 11.0 0.0 0.24 10.2 0.0 1.5 1 1 0 1 1 1 0 Fimbrillin-like zinc_ribbon_2 PF13240.6 NODE_50838_length_359_cov_123.518519_g42933_i0reverse_frame_2 - 0.017 14.8 2.1 0.029 14.1 2.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain DZR PF12773.7 NODE_50838_length_359_cov_123.518519_g42933_i0reverse_frame_2 - 0.02 14.9 0.7 0.029 14.4 0.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 NODE_50838_length_359_cov_123.518519_g42933_i0reverse_frame_2 - 0.3 10.6 2.6 0.61 9.6 2.6 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zf-RanBP PF00641.18 NODE_50838_length_359_cov_123.518519_g42933_i0reverse_frame_2 - 1.8 7.9 8.4 0.25 10.7 3.4 2.0 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Nudix_N_2 PF14803.6 NODE_50836_length_359_cov_157.015432_g42931_i0forward_frame_3 - 0.19 11.7 0.1 0.19 11.7 0.1 2.9 3 1 1 4 4 4 0 Nudix N-terminal Actino_peptide PF14408.6 NODE_50836_length_359_cov_157.015432_g42931_i0forward_frame_2 - 1.2 9.3 11.7 0.17 12.0 2.0 2.2 2 0 0 2 2 2 0 Ribosomally synthesised peptide in actinomycetes IL3 PF02059.15 NODE_50834_length_359_cov_172.756173_g42929_i0reverse_frame_3 - 0.02 14.9 0.2 0.025 14.7 0.2 1.2 1 0 0 1 1 1 0 Interleukin-3 Paramyxo_P_V_N PF13825.6 NODE_50834_length_359_cov_172.756173_g42929_i0reverse_frame_3 - 0.032 13.6 0.7 0.038 13.4 0.7 1.0 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus Pox_Ag35 PF03286.14 NODE_50832_length_359_cov_226.503086_g42927_i0forward_frame_3 - 0.0059 16.4 0.6 0.007 16.2 0.6 1.1 1 0 0 1 1 1 1 Pox virus Ag35 surface protein Dishevelled PF02377.15 NODE_50832_length_359_cov_226.503086_g42927_i0forward_frame_3 - 0.55 10.7 5.0 1.3 9.5 5.2 1.5 1 1 0 1 1 1 0 Dishevelled specific domain DAGK_acc PF00609.19 NODE_50822_length_360_cov_1.735385_g42917_i0reverse_frame_3 - 0.1 12.9 0.7 0.13 12.6 0.7 1.2 1 0 0 1 1 1 0 Diacylglycerol kinase accessory domain Peptidase_C62 PF12380.8 NODE_50822_length_360_cov_1.735385_g42917_i0forward_frame_2 - 0.1 11.7 0.0 0.17 11.0 0.0 1.3 2 0 0 2 2 2 0 Gill-associated viral 3C-like peptidase Tat PF00539.18 NODE_50819_length_360_cov_1.956923_g42914_i0reverse_frame_2 - 0.21 11.8 2.6 0.32 11.2 2.6 1.3 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) Ion_trans PF00520.31 NODE_50814_length_360_cov_2.246154_g42909_i0forward_frame_2 - 1.5e-14 53.9 0.9 1.7e-14 53.7 0.9 1.0 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 NODE_50814_length_360_cov_2.246154_g42909_i0forward_frame_2 - 0.013 14.2 0.2 0.015 14.0 0.2 1.1 1 0 0 1 1 1 0 Polycystin cation channel Erf4 PF10256.9 NODE_50813_length_360_cov_2.261538_g42908_i0reverse_frame_3 - 0.047 13.8 0.4 0.07 13.2 0.4 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family DUF2207 PF09972.9 NODE_50813_length_360_cov_2.261538_g42908_i0forward_frame_2 - 0.057 12.2 2.8 0.07 11.9 2.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5381 PF17353.2 NODE_50813_length_360_cov_2.261538_g42908_i0forward_frame_2 - 0.43 10.3 6.6 0.51 10.1 6.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) PPI_Ypi1 PF07491.11 NODE_50812_length_360_cov_2.332308_g42907_i0reverse_frame_3 - 0.67 9.8 4.8 1.1 9.1 4.8 1.3 1 0 0 1 1 1 0 Protein phosphatase inhibitor DUF5383 PF17355.2 NODE_50812_length_360_cov_2.332308_g42907_i0forward_frame_2 - 0.032 14.6 1.0 0.032 14.6 1.0 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5383) Formin_GBD_N PF18382.1 NODE_50812_length_360_cov_2.332308_g42907_i0forward_frame_2 - 0.062 13.8 0.1 1 9.9 0.0 2.1 2 0 0 2 2 2 0 Formin N-terminal GTPase-binding domain EF-hand_6 PF13405.6 NODE_50811_length_360_cov_2.710769_g42906_i0reverse_frame_3 - 0.058 13.4 0.2 0.33 11.0 0.1 2.3 2 0 0 2 2 2 0 EF-hand domain AcetylCoA_hyd_C PF13336.6 NODE_50810_length_360_cov_3.052308_g42905_i0reverse_frame_3 - 8.3e-05 22.6 0.0 0.00012 22.1 0.0 1.2 1 0 0 1 1 1 1 Acetyl-CoA hydrolase/transferase C-terminal domain UPF0061 PF02696.14 NODE_50809_length_360_cov_3.135385_g42904_i0reverse_frame_2 - 0.022 13.5 0.0 0.027 13.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family hemP PF10636.9 NODE_50809_length_360_cov_3.135385_g42904_i0forward_frame_3 - 1.6e-14 53.4 0.7 2.6e-14 52.7 0.7 1.4 1 0 0 1 1 1 1 Hemin uptake protein hemP WD40 PF00400.32 NODE_50805_length_360_cov_3.467692_g42900_i0reverse_frame_2 - 2.4e-11 44.0 1.0 0.0038 18.0 0.0 3.1 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_50805_length_360_cov_3.467692_g42900_i0reverse_frame_2 - 0.0011 19.2 0.6 0.13 12.6 0.0 2.6 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain RE_ScaI PF09569.10 NODE_50805_length_360_cov_3.467692_g42900_i0reverse_frame_2 - 0.052 13.3 0.3 0.12 12.0 0.1 1.6 1 1 1 2 2 2 0 ScaI restriction endonuclease VTC PF09359.10 NODE_50805_length_360_cov_3.467692_g42900_i0reverse_frame_2 - 0.065 12.6 0.1 0.089 12.2 0.1 1.1 1 0 0 1 1 1 0 VTC domain eIF2A PF08662.11 NODE_50802_length_360_cov_3.800000_g42897_i0forward_frame_2 - 0.016 15.1 0.1 0.028 14.3 0.0 1.4 2 0 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A RecO_C PF02565.15 NODE_50798_length_360_cov_35.898462_g42893_i0forward_frame_2 - 0.15 11.8 0.7 0.2 11.4 0.7 1.2 1 0 0 1 1 1 0 Recombination protein O C terminal START PF01852.19 NODE_50792_length_360_cov_68.636923_g42887_i0reverse_frame_2 - 0.11 11.9 0.8 0.14 11.6 0.8 1.1 1 0 0 1 1 1 0 START domain LYRIC PF15686.5 NODE_50792_length_360_cov_68.636923_g42887_i0forward_frame_3 - 0.04 13.5 0.5 0.051 13.1 0.5 1.1 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family ASC PF00858.24 NODE_50790_length_360_cov_72.080000_g42885_i0reverse_frame_3 - 0.018 14.0 0.1 0.018 14.0 0.1 1.3 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel PLC-beta_C PF08703.10 NODE_50789_length_360_cov_72.716923_g42884_i0reverse_frame_3 - 0.0042 17.1 0.1 0.0057 16.6 0.1 1.3 1 0 0 1 1 1 1 PLC-beta C terminal Barwin PF00967.17 NODE_50789_length_360_cov_72.716923_g42884_i0reverse_frame_2 - 1.6 8.6 5.8 2.6 7.9 4.0 1.9 1 1 1 2 2 2 0 Barwin family GF_recep_IV PF14843.6 NODE_50788_length_360_cov_73.526154_g42883_i0reverse_frame_3 - 0.00049 19.9 0.6 0.0007 19.4 0.6 1.2 1 0 0 1 1 1 1 Growth factor receptor domain IV DUF2670 PF10875.8 NODE_50780_length_360_cov_94.670769_g42875_i0forward_frame_2 - 0.17 12.0 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) UPF0020 PF01170.18 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 2e-08 34.2 0.0 7.5e-07 29.0 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 4.7e-07 30.4 0.0 6e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 7.8e-06 26.5 0.0 1.1e-05 26.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.00021 21.1 0.0 0.00024 20.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.00069 19.4 0.0 0.00097 18.9 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Cons_hypoth95 PF03602.15 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.0041 16.8 0.0 0.0046 16.6 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 CMAS PF02353.20 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.006 15.9 0.0 0.0072 15.7 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Met_10 PF02475.16 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.0068 16.2 0.0 0.0083 15.9 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_2 PF00891.18 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.12 11.7 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 O-methyltransferase domain Methyltransf_15 PF09445.10 NODE_50773_length_360_cov_137.156923_g42868_i0reverse_frame_3 - 0.21 11.1 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase DUF2066 PF09839.9 NODE_50770_length_360_cov_169.181538_g42865_i0reverse_frame_2 - 0.034 13.5 0.0 0.042 13.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2066) Alpha-2-MRAP_C PF06401.11 NODE_50767_length_360_cov_241.024615_g42862_i0forward_frame_3 - 0.095 12.6 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain Peptidase_M29 PF02073.15 NODE_50764_length_360_cov_324.326154_g42859_i0reverse_frame_3 - 0.091 11.5 0.5 0.096 11.4 0.5 1.0 1 0 0 1 1 1 0 Thermophilic metalloprotease (M29) DUF2868 PF11067.8 NODE_50764_length_360_cov_324.326154_g42859_i0reverse_frame_3 - 0.38 10.2 3.7 0.44 10.0 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) FAP PF07174.11 NODE_50764_length_360_cov_324.326154_g42859_i0reverse_frame_3 - 2.8 7.3 14.8 3.4 7.0 14.8 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Keratin_2_head PF16208.5 NODE_50764_length_360_cov_324.326154_g42859_i0forward_frame_3 - 0.037 14.2 14.3 0.046 13.9 14.3 1.2 1 0 0 1 1 1 0 Keratin type II head PPI_Ypi1 PF07491.11 NODE_50762_length_360_cov_600.855385_g42857_i0reverse_frame_3 - 0.66 9.8 4.4 1.3 8.9 4.4 1.5 1 0 0 1 1 1 0 Protein phosphatase inhibitor EVC2_like PF12297.8 NODE_50762_length_360_cov_600.855385_g42857_i0forward_frame_3 - 0.28 9.8 0.2 0.3 9.7 0.2 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein DUF1422 PF07226.11 ORF9854 - 0.51 10.4 6.2 0.29 11.2 2.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1422) FeoB_associated PF12669.7 ORF98167 - 4 7.9 12.7 0.81 10.1 6.2 2.2 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein PADR1 PF08063.12 ORF97148 - 0.17 11.7 2.7 13 5.7 0.0 2.4 1 1 1 2 2 2 0 PADR1 (NUC008) domain Amino_oxidase PF01593.24 ORF96861 - 0.042 13.1 0.0 0.042 13.1 0.0 1.1 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Chorion_2 PF03964.15 ORF96861 - 8.4 7.3 8.3 25 5.8 8.3 1.8 1 1 0 1 1 1 0 Chorion family 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks221.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks221.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks221.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks221.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Rota_NS53 PF00981.17 ORF9642 - 8.6 5.1 12.7 10 4.9 12.7 1.1 1 0 0 1 1 1 0 Rotavirus RNA-binding Protein 53 (NS53) DAP10 PF07213.11 ORF96172 - 0.052 13.5 0.3 0.23 11.5 0.0 2.0 2 0 0 2 2 2 0 DAP10 membrane protein Tcell_CD4_C PF12104.8 ORF96167 - 5.8 6.9 12.1 0.12 12.3 5.2 1.8 2 0 0 2 2 2 0 T cell CD4 receptor C terminal region SNARE PF05739.19 ORF95964 - 0.28 11.2 2.1 0.62 10.1 2.1 1.6 1 0 0 1 1 1 0 SNARE domain AHL_synthase PF17327.2 ORF9551 - 0.26 10.2 0.1 0.28 10.1 0.1 1.1 1 0 0 1 1 1 0 Acyl homoserine lactone synthase Pkinase PF00069.25 ORF95212 - 0.014 14.8 0.0 0.017 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain End_tail_spike PF12219.8 ORF94680 - 0.011 15.8 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Catalytic domain of bacteriophage endosialidase Mod_r PF07200.13 ORF94649 - 0.0062 16.7 7.2 0.0062 16.7 7.2 1.6 1 1 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein HALZ PF02183.18 ORF94649 - 0.0089 16.2 15.3 0.026 14.8 1.6 3.5 1 1 2 3 3 3 2 Homeobox associated leucine zipper FapA PF03961.13 ORF94649 - 0.01 14.5 10.7 0.011 14.4 10.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Nmad5 PF18757.1 ORF94649 - 0.11 12.6 7.5 0.36 11.0 0.9 2.0 1 1 1 2 2 2 0 Nucleotide modification associated domain 5 Ax_dynein_light PF10211.9 ORF94649 - 0.19 11.7 12.0 0.25 11.3 11.5 1.5 1 1 0 1 1 1 0 Axonemal dynein light chain APG6_N PF17675.1 ORF94649 - 0.19 12.2 7.6 0.22 12.0 7.6 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF3450 PF11932.8 ORF94649 - 0.45 9.8 7.5 0.27 10.5 2.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) TMPIT PF07851.13 ORF94649 - 2.2 7.5 7.1 1.3 8.2 5.5 1.4 1 1 1 2 2 2 0 TMPIT-like protein bZIP_1 PF00170.21 ORF94649 - 2.9 8.1 14.1 1.8 8.7 2.5 2.7 1 1 1 2 2 2 0 bZIP transcription factor DivIC PF04977.15 ORF94649 - 3 7.7 15.1 1.4 8.7 1.6 2.7 1 1 2 3 3 3 0 Septum formation initiator DUF5320 PF17253.2 ORF94649 - 7.5 7.7 5.2 3.2 8.9 1.8 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5320) Cupin_5 PF06172.11 ORF94591 - 0.033 14.4 0.0 0.042 14.0 0.0 1.3 1 0 0 1 1 1 0 Cupin superfamily (DUF985) zf-B_box PF00643.24 ORF94180 - 0.077 13.2 9.0 0.13 12.5 9.0 1.4 1 0 0 1 1 1 0 B-box zinc finger DUF2501 PF10696.9 ORF94105 - 0.069 13.4 0.1 0.1 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2501) MotA_ExbB PF01618.16 ORF92400 - 2.3e-38 130.8 1.0 2.7e-38 130.6 1.0 1.1 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family Spin-Ssty PF02513.17 ORF92361 - 0.00023 20.8 0.2 0.00039 20.1 0.2 1.4 1 0 0 1 1 1 1 Spin/Ssty Family SAP25 PF15476.6 ORF91096 - 0.012 15.4 0.5 0.014 15.1 0.5 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP25 WSK PF03832.13 ORF90777 - 0.13 12.0 3.6 7 6.4 0.0 3.1 3 0 0 3 3 3 0 WSK motif SCAN PF02023.17 ORF90567 - 0.022 14.6 0.4 0.042 13.7 0.4 1.5 1 0 0 1 1 1 0 SCAN domain SmpA_OmlA PF04355.13 ORF90539 - 0.089 12.6 0.0 0.18 11.6 0.0 1.5 1 1 0 1 1 1 0 SmpA / OmlA family RR_TM4-6 PF06459.12 ORF89553 - 9.4 6.0 12.5 11 5.8 12.5 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 cNMP_binding PF00027.29 ORF89364 - 2.4e-06 27.5 0.0 3.9e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain UPF0223 PF05256.12 ORF89364 - 0.005 17.2 0.6 0.0091 16.3 0.6 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0223) S6PP_C PF08472.10 ORF89364 - 0.02 14.7 0.2 4.6 7.1 0.0 2.1 2 0 0 2 2 2 0 Sucrose-6-phosphate phosphohydrolase C-terminal JUPITER PF17054.5 ORF88527 - 0.039 13.4 2.9 0.17 11.3 0.0 2.3 1 1 1 2 2 2 0 Microtubule-Associated protein Jupiter Zip PF02535.22 ORF8818 - 6.2 5.9 11.1 6.3 5.9 11.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter PurL_C PF16904.5 ORF866 - 0.21 11.9 0.0 0.29 11.4 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylformylglycinamidine synthase II C-terminus Cbl_N3 PF02762.14 ORF86528 - 0.039 13.8 0.0 0.17 11.8 0.0 1.9 2 0 0 2 2 2 0 CBL proto-oncogene N-terminus, SH2-like domain GH101_N PF17995.1 ORF86492 - 0.11 12.2 0.1 0.19 11.4 0.1 1.4 1 1 0 1 1 1 0 Endo-alpha-N-acetylgalactosaminidase N-terminal DIL PF01843.19 ORF8596 - 0.084 13.2 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 DIL domain Heliorhodopsin PF18761.1 ORF8596 - 0.13 11.5 0.1 0.17 11.1 0.1 1.1 1 0 0 1 1 1 0 Heliorhodopsin Rdx PF10262.9 ORF85104 - 3.5e-12 46.3 0.0 5.9e-12 45.6 0.0 1.3 1 1 0 1 1 1 1 Rdx family Filament PF00038.21 ORF8458 - 0.0014 18.3 3.2 0.0014 18.3 3.2 1.4 2 0 0 2 2 1 1 Intermediate filament protein ZapB PF06005.12 ORF8458 - 0.0016 18.9 2.0 1 9.9 0.0 2.3 1 1 1 2 2 2 2 Cell division protein ZapB TPR_MLP1_2 PF07926.12 ORF8458 - 0.0026 17.8 3.5 0.0026 17.8 3.5 1.5 2 0 0 2 2 2 1 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 ORF8458 - 0.0032 16.9 0.7 0.0033 16.8 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Lectin_N PF03954.14 ORF8458 - 0.0061 16.3 3.3 0.0073 16.1 2.8 1.5 1 1 0 1 1 1 1 Hepatic lectin, N-terminal domain AAA_32 PF13654.6 ORF8458 - 0.0064 15.3 1.6 0.0071 15.2 1.6 1.1 1 0 0 1 1 1 1 AAA domain DivIC PF04977.15 ORF8458 - 0.011 15.4 6.6 0.92 9.3 1.8 2.3 1 1 1 2 2 2 0 Septum formation initiator Mod_r PF07200.13 ORF8458 - 0.014 15.5 4.8 0.014 15.5 4.8 1.7 1 1 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein BORCS7 PF16088.5 ORF8458 - 0.016 15.5 2.1 0.016 15.5 2.1 1.8 2 0 0 2 2 2 0 BLOC-1-related complex sub-unit 7 Syntaxin PF00804.25 ORF8458 - 0.016 14.9 4.0 0.016 14.9 4.0 1.4 1 1 0 1 1 1 0 Syntaxin TMF_DNA_bd PF12329.8 ORF8458 - 0.019 15.0 7.9 0.064 13.3 8.0 1.9 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF8458 - 0.019 13.8 4.1 0.028 13.3 4.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein FemAB PF02388.16 ORF8458 - 0.02 13.8 2.2 0.021 13.7 2.2 1.2 1 0 0 1 1 1 0 FemAB family Not3 PF04065.15 ORF8458 - 0.033 13.6 6.9 0.038 13.4 6.9 1.1 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component CdvA PF18822.1 ORF8458 - 0.042 13.7 4.3 0.1 12.4 4.5 1.6 1 1 1 2 2 2 0 CdvA-like coiled-coil domain Phage_GP20 PF06810.11 ORF8458 - 0.042 13.7 6.5 0.2 11.5 6.5 1.9 1 1 0 1 1 1 0 Phage minor structural protein GP20 DUF2408 PF10303.9 ORF8458 - 0.06 13.9 2.8 0.069 13.7 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) Wtap PF17098.5 ORF8458 - 0.065 13.2 0.6 0.065 13.2 0.6 1.6 2 0 0 2 2 1 0 WTAP/Mum2p family Lebercilin PF15619.6 ORF8458 - 0.077 12.6 4.6 0.2 11.3 4.6 1.7 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease Cnn_1N PF07989.11 ORF8458 - 0.079 13.1 9.3 0.13 12.4 1.9 2.4 2 1 1 3 3 2 0 Centrosomin N-terminal motif 1 ABC_tran_CTD PF16326.5 ORF8458 - 0.11 12.7 0.6 0.25 11.6 0.2 1.7 2 0 0 2 2 2 0 ABC transporter C-terminal domain FapA PF03961.13 ORF8458 - 0.12 11.0 7.0 0.15 10.7 7.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A BLOC1_2 PF10046.9 ORF8458 - 0.14 12.5 10.2 0.04 14.2 6.9 1.7 2 0 0 2 2 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SlyX PF04102.12 ORF8458 - 0.16 12.6 1.5 1.6 9.4 0.0 2.3 2 1 1 3 3 2 0 SlyX Phage_Mu_Gam PF07352.12 ORF8458 - 0.17 11.8 5.5 0.28 11.1 5.5 1.6 1 1 0 1 1 1 0 Bacteriophage Mu Gam like protein DUF4988 PF16378.5 ORF8458 - 0.18 11.5 3.3 0.95 9.1 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function Med9 PF07544.13 ORF8458 - 0.18 11.9 4.9 0.59 10.3 0.3 2.2 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Csm1_N PF18504.1 ORF8458 - 0.21 11.9 8.7 0.51 10.7 0.3 2.5 2 1 1 3 3 2 0 Csm1 N-terminal domain RPW8 PF05659.11 ORF8458 - 0.22 11.2 4.6 0.19 11.4 2.9 1.7 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Jnk-SapK_ap_N PF09744.9 ORF8458 - 0.27 11.5 6.7 0.78 9.9 6.7 1.7 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF4200 PF13863.6 ORF8458 - 0.29 11.5 7.9 0.52 10.7 5.2 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Prefoldin PF02996.17 ORF8458 - 0.31 11.0 6.2 0.54 10.2 0.5 2.3 1 1 1 2 2 2 0 Prefoldin subunit STAT_alpha PF01017.20 ORF8458 - 0.39 10.6 8.8 30 4.4 8.8 2.1 1 1 0 1 1 1 0 STAT protein, all-alpha domain DUF2443 PF10398.9 ORF8458 - 0.42 10.7 3.6 0.62 10.1 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2443) Uso1_p115_C PF04871.13 ORF8458 - 0.44 10.9 5.8 0.23 11.9 3.4 1.7 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region TMF_TATA_bd PF12325.8 ORF8458 - 0.46 10.7 5.2 0.2 11.9 2.8 1.6 2 0 0 2 2 1 0 TATA element modulatory factor 1 TATA binding Tropomyosin_1 PF12718.7 ORF8458 - 0.66 10.1 8.3 1.4 9.1 5.9 2.4 2 1 0 2 2 2 0 Tropomyosin like Muted PF14942.6 ORF8458 - 0.72 10.2 7.8 0.27 11.6 4.6 2.0 2 1 0 2 2 2 0 Organelle biogenesis, Muted-like protein FliD_C PF07195.12 ORF8458 - 0.73 9.2 8.4 0.096 12.1 4.5 1.5 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 C-terminus DUF4665 PF15679.5 ORF8458 - 0.89 10.2 10.9 0.22 12.2 7.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4665) LPP PF04728.13 ORF8458 - 1 9.8 6.7 0.75 10.2 0.3 2.7 1 1 1 2 2 2 0 Lipoprotein leucine-zipper CENP-H PF05837.12 ORF8458 - 1.1 9.7 7.3 1.5 9.3 3.3 2.2 2 1 0 2 2 2 0 Centromere protein H (CENP-H) DUF2573 PF10835.8 ORF8458 - 1.2 9.5 5.1 2.1 8.7 1.6 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2573) XhlA PF10779.9 ORF8458 - 1.2 9.4 9.1 1.4 9.2 1.7 2.2 1 1 1 2 2 2 0 Haemolysin XhlA FlaC_arch PF05377.11 ORF8458 - 1.3 9.4 6.5 15 6.1 0.4 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF1664 PF07889.12 ORF8458 - 1.6 8.8 6.2 0.79 9.8 3.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) TMPIT PF07851.13 ORF8458 - 1.7 7.8 9.1 2.5 7.2 9.1 1.4 1 1 0 1 1 1 0 TMPIT-like protein bZIP_1 PF00170.21 ORF8458 - 1.9 8.7 5.7 13 5.9 0.8 2.4 1 1 1 2 2 2 0 bZIP transcription factor FlxA PF14282.6 ORF8458 - 9 6.4 14.4 1.4 8.9 9.3 2.1 2 1 0 2 2 2 0 FlxA-like protein DUF3377 PF11857.8 ORF83172 - 0.076 12.9 0.1 0.15 12.0 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) TMEM174 PF15029.6 ORF82986 - 0.11 12.2 0.2 0.14 11.9 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 174 CAMSAP_CKK PF08683.11 ORF82172 - 0.15 12.2 0.0 0.29 11.3 0.0 1.4 1 0 0 1 1 1 0 Microtubule-binding calmodulin-regulated spectrin-associated ArsC PF03960.15 ORF8194 - 1.5e-22 79.3 0.1 1.8e-22 79.1 0.1 1.1 1 0 0 1 1 1 1 ArsC family Glutaredoxin PF00462.24 ORF8194 - 6e-05 23.2 0.0 0.0084 16.3 0.0 2.1 2 0 0 2 2 2 2 Glutaredoxin kleA_kleC PF17383.2 ORF8194 - 0.1 13.0 0.2 0.14 12.5 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized KorC regulated protein A Tcell_CD4_C PF12104.8 ORF81801 - 5.8 6.9 12.1 0.12 12.3 5.2 1.8 2 0 0 2 2 2 0 T cell CD4 receptor C terminal region YjcB PF15940.5 ORF81401 - 1.4e-44 150.1 4.5 2e-44 149.6 4.5 1.2 1 0 0 1 1 1 1 Family of unknown function DUF732 PF05305.14 ORF81148 - 0.068 13.5 0.2 4.2 7.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF732) DUF3185 PF11381.8 ORF81041 - 4.6 7.3 8.5 18 5.5 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) Per1 PF04080.13 ORF81012 - 0.025 14.3 5.7 0.028 14.2 5.7 1.0 1 0 0 1 1 1 0 Per1-like family RAMP4 PF06624.12 ORF81012 - 0.27 11.3 2.6 0.41 10.7 1.7 1.8 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 DUF1180 PF06679.12 ORF80707 - 1 9.8 3.7 1.2 9.5 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Herpes_UL52 PF03121.15 ORF79923 - 0.027 14.4 0.2 0.054 13.4 0.2 1.7 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase UCR_hinge PF02320.16 ORF79036 - 0.087 13.0 0.1 0.087 13.0 0.1 1.6 2 1 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein Pox_MCEL PF03291.16 ORF78138 - 0.34 10.0 0.0 0.43 9.6 0.0 1.0 1 0 0 1 1 1 0 mRNA capping enzyme ATP_sub_h PF10775.9 ORF75475 - 0.082 12.9 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 ATP synthase complex subunit h RuvX PF03652.15 ORF75042 - 0.021 15.2 0.1 0.023 15.1 0.1 1.1 1 0 0 1 1 1 0 Holliday junction resolvase Fer4 PF00037.27 ORF69581 - 9.1e-14 50.6 12.4 5.2e-07 29.2 3.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 ORF69581 - 3.3e-13 49.6 32.3 5.7e-09 36.0 10.4 1.8 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF69581 - 8.9e-13 48.6 7.5 1.6e-12 47.8 7.5 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF69581 - 1.1e-11 44.6 23.9 1.2e-07 31.8 13.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF69581 - 7e-11 42.1 22.2 5.7e-08 32.7 13.1 2.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF69581 - 1.6e-10 40.6 12.5 6e-06 26.1 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 ORF69581 - 1e-09 38.8 6.3 0.00011 22.6 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF69581 - 1.6e-09 38.6 5.7 0.00032 21.6 1.3 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 ORF69581 - 6.5e-09 35.6 11.0 0.0004 20.7 1.5 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 ORF69581 - 1.1e-06 28.3 19.9 0.00027 20.9 3.1 2.6 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 ORF69581 - 6e-06 26.7 6.3 0.001 19.5 0.6 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 ORF69581 - 1.9e-05 25.0 13.8 5.4e-05 23.6 12.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 ORF69581 - 2.4e-05 24.5 8.6 0.021 15.0 1.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF69581 - 0.00015 22.5 10.9 0.003 18.4 0.4 2.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF69581 - 0.00016 22.3 19.7 0.004 18.0 4.4 2.6 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 ORF69581 - 0.0026 18.5 6.8 0.034 14.9 0.7 2.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain ETF_QO PF05187.13 ORF69581 - 0.0083 16.2 1.4 0.011 15.8 1.4 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Cerato-platanin PF07249.12 ORF67058 - 0.02 15.0 0.3 0.032 14.4 0.3 1.3 1 0 0 1 1 1 0 Cerato-platanin ORC_WH_C PF18137.1 ORF6546 - 0.0084 16.2 0.0 0.0091 16.1 0.0 1.0 1 0 0 1 1 1 1 Origin recognition complex winged helix C-terminal DUF4094 PF13334.6 ORF64983 - 0.074 13.5 2.2 0.12 12.8 2.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) End_tail_spike PF12219.8 ORF64803 - 0.011 15.8 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Catalytic domain of bacteriophage endosialidase MORN PF02493.20 ORF64259 - 2.5e-09 36.5 11.4 4.2e-05 23.2 1.8 3.2 3 0 0 3 3 3 2 MORN repeat DUF1323 PF07037.11 ORF63364 - 2.1e-49 167.0 0.0 2.7e-49 166.6 0.0 1.1 1 0 0 1 1 1 1 Putative transcription regulator (DUF1323) HTH_29 PF13551.6 ORF63364 - 0.00031 20.7 0.0 0.00059 19.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix HTH_3 PF01381.22 ORF63364 - 0.00037 20.5 0.0 0.00069 19.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_17 PF12728.7 ORF63364 - 0.0005 20.2 0.1 0.00097 19.3 0.1 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF63364 - 0.0009 19.0 0.0 0.0025 17.6 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.6 ORF63364 - 0.0014 18.7 0.3 0.0059 16.7 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Tnp_Mu_1 PF02316.16 ORF63364 - 0.002 18.3 0.5 0.005 17.0 0.5 1.7 1 1 0 1 1 1 1 Mu DNA-binding domain DUF4224 PF13986.6 ORF63364 - 0.0047 16.8 0.1 0.011 15.6 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4224) HTH_26 PF13443.6 ORF63364 - 0.0074 16.7 0.0 0.012 16.1 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 ORF63364 - 0.0088 16.4 0.0 0.013 15.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Terminase_5 PF06056.12 ORF63364 - 0.012 15.4 0.0 0.024 14.5 0.0 1.5 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_24 PF13412.6 ORF63364 - 0.016 14.7 0.1 0.039 13.5 0.0 1.8 2 0 0 2 2 1 0 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 ORF63364 - 0.018 14.8 0.0 0.033 14.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain CSN8_PSD8_EIF3K PF10075.9 ORF63364 - 0.021 14.8 0.0 0.034 14.1 0.0 1.2 1 0 0 1 1 1 0 CSN8/PSMD8/EIF3K family YdaS_antitoxin PF15943.5 ORF63364 - 0.038 13.8 0.0 0.067 13.1 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_Crp_2 PF13545.6 ORF63364 - 0.053 13.5 0.0 0.22 11.5 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 ORF63364 - 0.19 11.9 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase SAP30_Sin3_bdg PF13867.6 ORF61052 - 3.6e-10 40.0 0.1 3.6e-10 40.0 0.1 2.1 3 0 0 3 3 3 1 Sin3 binding region of histone deacetylase complex subunit SAP30 RhoGEF67_u2 PF16614.5 ORF61052 - 0.11 12.6 0.8 0.14 12.2 0.8 1.3 1 0 0 1 1 1 0 Unstructured region two on RhoGEF 6 and 7 Ric8 PF10165.9 ORF61032 - 0.028 13.5 0.1 0.03 13.4 0.1 1.0 1 0 0 1 1 1 0 Guanine nucleotide exchange factor synembryn Humanin PF15040.6 ORF60580 - 0.24 10.9 0.5 0.24 10.9 0.5 1.7 2 0 0 2 2 2 0 Humanin family WavE PF07507.11 ORF59510 - 0.047 12.9 0.6 0.052 12.7 0.6 1.0 1 0 0 1 1 1 0 WavE lipopolysaccharide synthesis DUF1158 PF06643.11 ORF57748 - 0.31 11.6 2.9 0.33 11.5 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1158) SsgA PF04686.12 ORF56814 - 0.017 15.1 0.1 0.029 14.4 0.1 1.4 1 1 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA Foamy_virus_ENV PF03408.14 ORF55881 - 0.011 13.6 1.5 0.013 13.4 1.5 1.0 1 0 0 1 1 1 0 Foamy virus envelope protein AMMECR1 PF01871.17 ORF5561 - 1.6e-24 86.4 0.0 1.9e-24 86.2 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 DUF1320 PF07030.12 ORF55091 - 0.044 13.9 0.2 0.77 9.9 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1320) PFU PF09070.11 ORF55091 - 0.15 12.3 0.0 0.62 10.3 0.0 1.8 2 0 0 2 2 2 0 PFU (PLAA family ubiquitin binding) UPF0225 PF17775.1 ORF53193 - 6.5e-28 97.5 0.0 7.4e-28 97.3 0.0 1.0 1 0 0 1 1 1 1 UPF0225 domain SEC-C PF02810.15 ORF53193 - 2.3e-11 43.4 11.5 4.5e-11 42.5 11.5 1.5 1 0 0 1 1 1 1 SEC-C motif CW_binding_1 PF01473.20 ORF53193 - 0.0032 17.7 0.4 0.007 16.6 0.4 1.6 1 0 0 1 1 1 1 Putative cell wall binding repeat DUF4818 PF16089.5 ORF52559 - 0.053 14.0 0.1 0.066 13.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) UPF0240 PF06784.11 ORF52441 - 0.012 15.6 0.6 0.016 15.3 0.6 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0240) DUF4665 PF15679.5 ORF52441 - 0.015 15.9 1.6 0.02 15.5 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4665) DUF2564 PF10819.8 ORF52441 - 0.033 14.6 0.0 0.059 13.8 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2564) Peptidase_S46 PF10459.9 ORF52441 - 0.055 12.1 0.2 0.059 12.0 0.2 1.0 1 0 0 1 1 1 0 Peptidase S46 DUF1320 PF07030.12 ORF52441 - 0.071 13.2 0.2 0.25 11.5 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1320) DUF5460 PF17544.2 ORF50982 - 0.016 14.3 0.1 0.017 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5460) DUF2312 PF10073.9 ORF50298 - 0.032 13.9 5.3 0.047 13.3 3.5 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) DUF4193 PF13834.6 ORF49460 - 0.14 12.7 1.8 0.26 11.8 1.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4193) THB PF18362.1 ORF47242 - 0.061 12.9 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Tri-helix bundle domain RsgA_GTPase PF03193.16 ORF47242 - 0.2 11.6 0.0 0.28 11.1 0.0 1.3 1 1 0 1 1 1 0 RsgA GTPase Vitelline_membr PF10542.9 ORF45207 - 0.0083 16.0 0.0 0.022 14.6 0.0 1.7 1 0 0 1 1 1 1 Vitelline membrane cysteine-rich region ASFV_360 PF01671.16 ORF44207 - 0.078 12.5 0.1 0.11 12.0 0.1 1.1 1 0 0 1 1 1 0 African swine fever virus multigene family 360 protein DUF1743 PF08489.11 ORF42718 - 0.056 13.5 0.1 0.069 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1743) Zn_ribbon_SprT PF17283.2 ORF40190 - 0.73 9.8 6.1 1.4 8.9 1.6 2.4 2 0 0 2 2 2 0 SprT-like zinc ribbon domain SSFA2_C PF14723.6 ORF40053 - 2.8 7.8 4.2 0.52 10.2 0.6 1.6 2 0 0 2 2 2 0 Sperm-specific antigen 2 C-terminus LRRNT PF01462.18 ORF39964 - 0.0076 15.9 0.1 0.016 14.9 0.1 1.6 1 0 0 1 1 1 1 Leucine rich repeat N-terminal domain DUF5313 PF17240.2 ORF39919 - 0.05 14.0 1.3 0.078 13.4 1.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5313) WAP PF00095.21 ORF39919 - 2.6 8.5 14.2 1.6 9.2 4.0 2.4 2 0 0 2 2 2 0 WAP-type (Whey Acidic Protein) 'four-disulfide core' RHIM PF12721.7 ORF39536 - 2.2 8.8 4.7 4.9 7.7 0.5 2.4 2 0 0 2 2 2 0 RIP homotypic interaction motif MORN PF02493.20 ORF39009 - 2.5e-09 36.5 11.4 4.2e-05 23.2 1.8 3.2 3 0 0 3 3 3 2 MORN repeat SDH_sah PF01972.16 ORF38301 - 0.005 15.9 1.5 0.0056 15.7 1.5 1.1 1 0 0 1 1 1 1 Serine dehydrogenase proteinase ArfGap PF01412.18 ORF38301 - 1.8 8.6 5.2 1.7 8.7 1.4 2.0 1 1 0 2 2 2 0 Putative GTPase activating protein for Arf MORN PF02493.20 ORF36535 - 2.5e-09 36.5 11.4 4.2e-05 23.2 1.8 3.2 3 0 0 3 3 3 2 MORN repeat Imm31 PF15591.6 ORF34016 - 0.14 12.0 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 31 DUF5408 PF17402.2 ORF32546 - 2.1 8.3 4.3 0.41 10.5 1.0 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5408) Hydrolase_6 PF13344.6 ORF32172 - 0.044 13.9 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase RNase_T PF00929.24 ORF32172 - 0.071 13.6 0.1 0.91 10.0 0.0 1.8 1 1 1 2 2 2 0 Exonuclease UPF0176_N PF17773.1 ORF32172 - 0.13 12.7 0.1 0.33 11.3 0.1 1.9 1 1 0 1 1 1 0 UPF0176 acylphosphatase like domain P66_CC PF16563.5 ORF32172 - 0.15 11.7 1.1 0.26 10.9 1.1 1.4 1 0 0 1 1 1 0 Coiled-coil and interaction region of P66A and P66B with MBD2 TFIIA_gamma_N PF02268.16 ORF32093 - 0.19 11.8 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit, helical domain FGFR3_TM PF18123.1 ORF31985 - 0.63 9.6 10.0 0.8 9.3 1.2 2.9 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain MORN PF02493.20 ORF31255 - 4.7e-12 45.0 19.2 4.2e-06 26.3 0.7 5.4 6 0 0 6 6 6 3 MORN repeat DUF559 PF04480.12 ORF31226 - 0.2 11.5 0.3 0.37 10.6 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF559) Roc PF08477.13 ORF30963 - 7.1e-11 42.4 0.6 8e-10 39.0 0.6 2.0 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF30963 - 2.5e-09 37.0 1.2 1.2e-08 34.8 1.2 1.8 1 1 0 1 1 1 1 Ras family MMR_HSR1 PF01926.23 ORF30963 - 0.0063 16.6 0.1 0.0091 16.1 0.1 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase TniB PF05621.11 ORF30963 - 0.0093 15.4 0.0 0.022 14.1 0.0 1.6 1 1 1 2 2 2 1 Bacterial TniB protein PI3K_p85B PF02192.16 ORF30963 - 0.023 14.4 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 PI3-kinase family, p85-binding domain UPF0114 PF03350.16 ORF29605 - 0.042 14.0 0.4 0.056 13.7 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein family, UPF0114 dsDNA_bind PF01984.20 ORF2894 - 4e-22 78.6 12.6 4.3e-22 78.5 12.6 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain TMPIT PF07851.13 ORF2894 - 0.14 11.4 1.5 0.19 10.9 1.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein KIP1 PF07765.12 ORF2894 - 1.1 9.4 7.9 1.4 9.1 3.5 2.2 1 1 1 2 2 2 0 KIP1-like protein BaxI_1 PF12811.7 ORF28498 - 0.045 13.3 4.1 0.28 10.7 0.7 2.0 1 1 1 2 2 2 0 Bax inhibitor 1 like Phage_holin_5_2 PF16079.5 ORF28498 - 0.099 13.0 4.1 0.22 11.9 1.2 2.1 1 1 1 2 2 2 0 Phage holin family Hol44, in holin superfamily V His_Phos_1 PF00300.22 ORF28255 - 0.00011 21.9 0.0 0.00015 21.5 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) AP_endonuc_2 PF01261.24 ORF28127 - 4e-10 39.5 0.0 4.4e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel ASFV_360 PF01671.16 ORF27625 - 0.078 12.5 0.1 0.11 12.0 0.1 1.1 1 0 0 1 1 1 0 African swine fever virus multigene family 360 protein Herpes_UL25 PF01499.16 ORF26529 - 0.0003 19.4 0.0 0.00031 19.4 0.0 1.0 1 0 0 1 1 1 1 Herpesvirus UL25 family MHC_II_beta PF00969.19 ORF2538 - 0.14 12.2 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Class II histocompatibility antigen, beta domain Tim17 PF02466.19 ORF23318 - 2.4e-08 34.3 0.4 3e-08 34.0 0.4 1.1 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family SNARE_assoc PF09335.11 ORF23318 - 0.023 15.2 2.9 0.044 14.3 0.8 2.1 1 1 1 2 2 2 0 SNARE associated Golgi protein UPF0506 PF11703.8 ORF22169 - 1.4 9.4 24.9 0.35 11.3 7.7 3.2 2 1 1 3 3 3 0 UPF0506 STT3_PglB_C PF18527.1 ORF20438 - 0.59 10.3 6.4 1.1 9.4 5.0 2.0 1 1 1 2 2 2 0 STT3/PglB C-terminal beta-barrel domain PMD PF10536.9 ORF20065 - 0.086 11.9 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Plant mobile domain MFS_1 PF07690.16 ORF18538 - 3.3e-07 29.6 14.1 3.6e-07 29.5 14.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF18538 - 0.1 11.4 8.9 0.12 11.2 8.9 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter TPX2_importin PF12214.8 ORF18227 - 0.027 14.7 1.7 0.037 14.2 1.7 1.4 1 1 0 1 1 1 0 Cell cycle regulated microtubule associated protein Pep1_7 PF17232.2 ORF18227 - 0.041 14.3 0.1 0.058 13.9 0.1 1.4 1 1 0 1 1 1 0 Elicitor peptide 1-7 EGF_MSP1_1 PF12946.7 ORF18009 - 0.75 9.9 3.5 0.35 10.9 0.9 1.8 2 0 0 2 2 2 0 MSP1 EGF domain 1 WD40 PF00400.32 ORF16713 - 2.4e-14 53.5 4.1 4.8e-05 24.1 0.2 3.2 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF16713 - 6.4e-06 26.4 0.1 1.2e-05 25.5 0.1 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF16713 - 0.0002 21.3 0.1 0.00025 21.0 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A SGL PF08450.12 ORF16713 - 0.00093 18.8 0.1 0.001 18.7 0.1 1.1 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Coatomer_WDAD PF04053.14 ORF16713 - 0.016 14.2 0.0 0.019 14.0 0.0 1.0 1 0 0 1 1 1 0 Coatomer WD associated region COPIIcoated_ERV PF07970.12 ORF16000 - 0.027 14.3 0.4 0.035 14.0 0.4 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum vesicle transporter Tmemb_9 PF05434.11 ORF151428 - 0.00024 21.0 0.8 0.00029 20.7 0.8 1.1 1 0 0 1 1 1 1 TMEM9 DUF4834 PF16118.5 ORF151428 - 0.019 15.9 0.1 0.031 15.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4441 PF14536.6 ORF151308 - 0.44 10.7 9.0 0.098 12.9 2.8 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4441) MFS_1 PF07690.16 ORF150620 - 0.00046 19.2 0.8 0.00049 19.1 0.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1576 PF07613.11 ORF150620 - 0.012 15.2 0.4 0.014 14.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1576) DUF347 PF03988.12 ORF150620 - 3.1 8.1 8.2 2.3 8.5 2.5 2.2 1 1 1 2 2 2 0 Repeat of Unknown Function (DUF347) Glycogen_syn PF05693.13 ORF149892 - 0.36 9.3 1.6 0.43 9.1 1.6 1.0 1 0 0 1 1 1 0 Glycogen synthase DUF1180 PF06679.12 ORF149701 - 1 9.8 3.7 1.2 9.5 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) PDDEXK_3 PF13366.6 ORF149525 - 0.16 12.4 0.1 0.31 11.4 0.1 1.5 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Gag_MA PF01140.19 ORF148728 - 0.1 12.3 0.0 0.23 11.2 0.0 1.5 1 1 0 1 1 1 0 Matrix protein (MA), p15 MRNIP PF15749.5 ORF148530 - 0.023 15.4 0.2 0.032 15.0 0.2 1.2 1 0 0 1 1 1 0 MRN-interacting protein Ilar_coat PF01787.16 ORF148530 - 0.16 11.7 0.3 0.22 11.3 0.3 1.1 1 0 0 1 1 1 0 Ilarvirus coat protein OrfB_Zn_ribbon PF07282.11 ORF147666 - 0.064 13.2 0.2 0.13 12.2 0.2 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain COPIIcoated_ERV PF07970.12 ORF147265 - 0.027 14.3 0.4 0.035 14.0 0.4 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum vesicle transporter LRR_2 PF07723.13 ORF144474 - 0.24 12.1 2.7 6 7.7 0.6 2.6 2 0 0 2 2 2 0 Leucine Rich Repeat MORN PF02493.20 ORF144401 - 0.2 11.6 4.4 0.65 10.0 0.1 2.7 3 0 0 3 3 3 0 MORN repeat Ribosomal_S3_C PF00189.20 ORF144328 - 2.8e-17 63.0 1.8 3.6e-17 62.7 1.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain Carboxyl_trans PF01039.22 ORF14432 - 0.2 10.2 0.1 0.22 10.1 0.1 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain TF_AP-2 PF03299.14 ORF141612 - 0.0088 16.0 0.0 0.01 15.8 0.0 1.0 1 0 0 1 1 1 1 Transcription factor AP-2 FPL PF09758.9 ORF140517 - 0.0049 16.9 0.8 0.0049 16.9 0.8 1.7 1 1 1 2 2 2 1 Uncharacterised conserved protein zf-C3HC4 PF00097.25 ORF140050 - 1.1e-09 38.0 13.3 1.6e-09 37.4 13.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF140050 - 9.4e-09 35.0 12.1 1.6e-08 34.2 12.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF140050 - 1.4e-08 35.0 9.8 2.1e-08 34.4 9.8 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_4 PF15227.6 ORF140050 - 2.2e-08 34.1 11.7 3.2e-08 33.6 11.7 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF140050 - 3.1e-08 33.3 7.0 4.3e-08 32.9 7.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF140050 - 1.2e-07 31.7 4.1 1.2e-07 31.7 4.1 1.7 1 1 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF140050 - 4.7e-05 23.2 7.1 7e-05 22.6 7.1 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-Nse PF11789.8 ORF140050 - 6e-05 22.8 7.2 9.5e-05 22.1 7.2 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_5 PF14634.6 ORF140050 - 6.1e-05 22.9 10.2 9.8e-05 22.2 10.2 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_10 PF16685.5 ORF140050 - 0.00019 21.5 6.0 0.00031 20.8 6.0 1.4 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-RING_4 PF14570.6 ORF140050 - 0.00046 19.9 9.0 0.0013 18.4 8.9 1.8 1 1 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-rbx1 PF12678.7 ORF140050 - 0.0023 18.2 12.2 0.023 15.0 12.2 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_6 PF14835.6 ORF140050 - 0.0038 17.1 1.1 0.0065 16.3 1.1 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein Rad50_zn_hook PF04423.14 ORF140050 - 0.0078 16.0 3.6 0.011 15.5 0.6 2.5 2 1 0 2 2 2 1 Rad50 zinc hook motif zf-ANAPC11 PF12861.7 ORF140050 - 0.0084 16.1 4.7 0.019 15.0 4.7 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 ORF140050 - 0.012 15.3 8.2 0.4 10.5 5.1 3.2 2 2 1 3 3 3 0 RING-like zinc finger zf-MIZ PF02891.20 ORF140050 - 0.028 14.2 8.2 0.05 13.4 8.2 1.5 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger zf-P11 PF03854.14 ORF140050 - 0.089 12.5 9.3 2 8.1 10.1 2.1 1 1 1 2 2 2 0 P-11 zinc finger DUF1644 PF07800.12 ORF140050 - 0.17 11.9 7.3 0.66 10.0 0.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1644) zf-RING-like PF08746.11 ORF140050 - 0.47 10.8 9.1 0.79 10.1 9.1 1.4 1 0 0 1 1 1 0 RING-like domain RecR PF02132.15 ORF140050 - 2.6 7.7 8.9 1.6 8.3 4.0 2.3 2 0 0 2 2 2 0 RecR protein SLATT_5 PF18160.1 ORF139048 - 0.12 11.7 4.5 0.15 11.4 4.5 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 INCENP_ARK-bind PF03941.15 ORF138437 - 7e-09 35.5 0.1 1.5e-08 34.4 0.1 1.6 1 0 0 1 1 1 1 Inner centromere protein, ARK binding region KIAA1430 PF13879.6 ORF137860 - 6.8e-14 52.5 1.8 9.1e-14 52.1 1.8 1.2 1 0 0 1 1 1 1 KIAA1430 homologue SsgA PF04686.12 ORF136886 - 0.017 15.1 0.1 0.029 14.4 0.1 1.4 1 1 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA DUF2500 PF10694.9 ORF136237 - 1.5e-31 109.1 0.1 1.7e-31 109.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2500) zf-ZPR1 PF03367.13 ORF134152 - 0.016 15.1 0.9 0.021 14.7 0.9 1.2 1 0 0 1 1 1 0 ZPR1 zinc-finger domain APG6_N PF17675.1 ORF134152 - 0.057 13.9 0.1 0.057 13.9 0.1 2.6 2 1 0 2 2 2 0 Apg6 coiled-coil region SSP160 PF06933.11 ORF134138 - 5.3e-05 21.6 13.6 5.8e-05 21.5 13.6 1.0 1 0 0 1 1 1 1 Special lobe-specific silk protein SSP160 MGC-24 PF05283.11 ORF134138 - 0.0067 16.9 3.6 0.0078 16.7 3.6 1.1 1 0 0 1 1 1 1 Multi-glycosylated core protein 24 (MGC-24), sialomucin RAP1 PF07218.11 ORF134138 - 0.3 9.3 7.8 0.32 9.2 7.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF515 PF04415.12 ORF134138 - 7.7 4.8 8.5 8.3 4.7 8.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) hGDE_central PF14702.6 ORF133747 - 0.23 11.1 4.3 0.29 10.8 4.3 1.1 1 0 0 1 1 1 0 Central domain of human glycogen debranching enzyme DUF1422 PF07226.11 ORF131426 - 4.7e-54 181.3 1.1 5.2e-54 181.1 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1422) Bax1-I PF01027.20 ORF131426 - 0.0057 16.5 4.1 0.0069 16.2 4.1 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 ATP_sub_h PF10775.9 ORF13098 - 0.18 11.8 0.7 0.35 10.9 0.7 1.4 1 0 0 1 1 1 0 ATP synthase complex subunit h Cyclin_N PF00134.23 ORF1295 - 6.5e-27 93.8 2.0 3.3e-21 75.4 0.2 2.0 2 0 0 2 2 2 2 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF1295 - 4.5e-11 42.9 0.3 6.9e-11 42.3 0.3 1.3 1 0 0 1 1 1 1 Cyclin, C-terminal domain Vps39_1 PF10366.9 ORF128457 - 0.16 12.3 2.6 0.3 11.4 1.0 1.8 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 1 UPF0240 PF06784.11 ORF127570 - 0.012 15.6 0.6 0.016 15.3 0.6 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0240) DUF4665 PF15679.5 ORF127570 - 0.015 15.9 1.6 0.02 15.5 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4665) DUF2564 PF10819.8 ORF127570 - 0.033 14.6 0.0 0.059 13.8 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2564) Peptidase_S46 PF10459.9 ORF127570 - 0.055 12.1 0.2 0.059 12.0 0.2 1.0 1 0 0 1 1 1 0 Peptidase S46 DUF1320 PF07030.12 ORF127570 - 0.071 13.2 0.2 0.25 11.5 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1320) Ras PF00071.22 ORF127192 - 6.5e-09 35.6 0.0 7e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 Ras family Prok-E2_C PF14459.6 ORF126958 - 0.086 13.0 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family C DUF3844 PF12955.7 ORF126875 - 0.38 10.9 5.1 1.5 9.0 2.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3844) OrfB_Zn_ribbon PF07282.11 ORF12671 - 0.013 15.4 0.4 0.027 14.4 0.4 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Amino_oxidase PF01593.24 ORF125505 - 0.042 13.1 0.0 0.042 13.1 0.0 1.1 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Chorion_2 PF03964.15 ORF125505 - 8.4 7.3 8.3 25 5.8 8.3 1.8 1 1 0 1 1 1 0 Chorion family 2 YqbF PF14553.6 ORF125077 - 0.075 12.9 0.9 0.18 11.7 0.9 1.7 1 0 0 1 1 1 0 YqbF, hypothetical protein domain DUF3018 PF11455.8 ORF125077 - 0.084 12.8 1.2 1.8 8.6 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3018) DUF2252 PF10009.9 ORF125077 - 2.8 6.9 7.6 3.3 6.7 7.6 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) NAM-associated PF14303.6 ORF124597 - 0.16 12.7 1.1 0.2 12.3 1.1 1.2 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain GH3 PF03321.13 ORF124026 - 2.6e-22 79.4 0.0 2.9e-22 79.2 0.0 1.1 1 0 0 1 1 1 1 GH3 auxin-responsive promoter Cytochrom_C PF00034.21 ORF123664 - 2.1e-05 25.6 0.3 3.6e-05 24.8 0.3 1.5 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF123664 - 6.2e-05 23.2 0.1 8.3e-05 22.8 0.1 1.4 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Ish1 PF10281.9 ORF123664 - 0.23 11.8 1.9 0.56 10.6 1.9 1.7 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein Matrilin_ccoil PF10393.9 ORF122775 - 0.057 13.3 0.0 0.082 12.8 0.0 1.2 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin Vps36-NZF-N PF16988.5 ORF12238 - 0.87 9.0 11.7 0.05 13.0 4.8 2.4 3 0 0 3 3 3 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-RanBP PF00641.18 ORF12238 - 1.3 8.4 11.1 1.3 8.5 5.4 2.7 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Alpha_adaptinC2 PF02883.20 ORF122184 - 0.05 13.9 0.0 0.064 13.6 0.0 1.2 1 0 0 1 1 1 0 Adaptin C-terminal domain Ribosomal_L11 PF00298.19 ORF121504 - 0.095 13.2 0.1 0.14 12.6 0.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain RecR PF02132.15 ORF120882 - 0.018 14.6 0.2 0.018 14.6 0.2 2.0 2 0 0 2 2 2 0 RecR protein CBM49 PF09478.10 ORF1200 - 0.044 14.1 0.7 0.23 11.8 0.3 2.1 1 1 1 2 2 2 0 Carbohydrate binding domain CBM49 zf-C2H2 PF00096.26 ORF119983 - 2.4e-12 46.6 19.3 0.00049 20.4 0.7 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF119983 - 2.6e-09 37.1 19.3 7.8e-07 29.2 0.6 4.1 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF119983 - 8.7e-09 35.5 17.8 0.0067 17.2 0.7 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF119983 - 0.036 14.3 8.4 1.5 9.2 0.9 2.2 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_3rep PF18868.1 ORF119983 - 0.068 13.8 3.0 0.1 13.3 0.9 2.1 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_jaz PF12171.8 ORF119983 - 0.16 12.3 7.2 1.1 9.6 0.4 2.6 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_aberr PF17017.5 ORF119983 - 0.28 11.3 7.4 3.1 7.9 0.9 2.3 1 1 0 2 2 2 0 Aberrant zinc-finger zf-C2H2_6 PF13912.6 ORF119983 - 0.42 10.7 15.7 0.39 10.8 2.5 3.4 3 1 0 3 3 3 0 C2H2-type zinc finger CxC6 PF18721.1 ORF119983 - 2.2 8.6 8.7 16 5.9 4.1 2.7 1 1 1 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases RecO_C PF02565.15 ORF118035 - 0.15 11.8 0.1 0.2 11.4 0.1 1.2 1 0 0 1 1 1 0 Recombination protein O C terminal Pirin_C_2 PF17954.1 ORF117859 - 4.4e-22 78.1 0.0 5.4e-22 77.8 0.0 1.1 1 0 0 1 1 1 1 Quercetinase C-terminal cupin domain Fumarate_red_D PF02313.17 ORF117182 - 1.6e-51 173.2 6.7 1.8e-51 173.0 6.7 1.0 1 0 0 1 1 1 1 Fumarate reductase subunit D DUF3797 PF12677.7 ORF11691 - 7.9 6.5 7.5 3.7 7.5 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF3797) Phytochelatin PF05023.14 ORF116185 - 0.018 14.3 0.2 0.035 13.3 0.2 1.5 1 1 0 1 1 1 0 Phytochelatin synthase PIG-X PF08320.12 ORF11561 - 0.04 13.8 0.0 0.049 13.5 0.0 1.3 1 0 0 1 1 1 0 PIG-X / PBN1 RecO_C PF02565.15 ORF115608 - 0.15 11.8 0.1 0.2 11.4 0.1 1.2 1 0 0 1 1 1 0 Recombination protein O C terminal SAP25 PF15476.6 ORF11518 - 0.012 15.4 0.5 0.014 15.1 0.5 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP25 DUF5460 PF17544.2 ORF114731 - 0.016 14.3 0.1 0.017 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5460) Cytochrom_C PF00034.21 ORF113549 - 1e-14 55.4 0.1 1.5e-14 54.9 0.1 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF113549 - 4.5e-07 30.1 1.8 1.1e-06 28.8 1.8 1.6 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 ORF113549 - 0.00074 19.2 0.1 0.0025 17.5 0.0 1.8 2 0 0 2 2 2 1 Cytochrome c-550 domain Cytochrome_P460 PF16694.5 ORF113549 - 0.069 13.5 0.3 2.1 8.7 0.1 2.0 2 0 0 2 2 2 0 Cytochrome P460 SSP160 PF06933.11 ORF113199 - 5.3e-05 21.6 13.6 5.8e-05 21.5 13.6 1.0 1 0 0 1 1 1 1 Special lobe-specific silk protein SSP160 MGC-24 PF05283.11 ORF113199 - 0.0067 16.9 3.6 0.0078 16.7 3.6 1.1 1 0 0 1 1 1 1 Multi-glycosylated core protein 24 (MGC-24), sialomucin RAP1 PF07218.11 ORF113199 - 0.3 9.3 7.8 0.32 9.2 7.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF515 PF04415.12 ORF113199 - 7.7 4.8 8.5 8.3 4.7 8.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) UPAR_LY6_2 PF16975.5 ORF112667 - 0.052 13.8 0.2 0.066 13.4 0.2 1.1 1 0 0 1 1 1 0 Ly6/PLAUR domain-containing protein 6, Lypd6 DUF272 PF03312.15 ORF112667 - 0.074 13.3 2.0 0.11 12.7 2.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF272) FGFR3_TM PF18123.1 ORF112467 - 0.84 9.2 10.6 1.4 8.5 1.4 2.4 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Proteasome PF00227.26 ORF111394 - 2.2e-28 99.1 0.0 2.6e-28 98.8 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit UPF0506 PF11703.8 ORF109225 - 0.2 12.1 4.2 0.17 12.3 0.8 2.2 2 0 0 2 2 2 0 UPF0506 PDDEXK_3 PF13366.6 ORF109208 - 0.16 12.4 0.1 0.31 11.4 0.1 1.5 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily LIG3_BRCT PF16759.5 ORF108262 - 0.084 13.2 0.1 0.21 11.9 0.0 1.7 2 0 0 2 2 2 0 DNA ligase 3 BRCT domain Ribosomal_60s PF00428.19 ORF10760 - 2e-20 73.2 5.7 2.5e-20 72.9 5.7 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein DUF295 PF03478.18 ORF105432 - 0.0092 15.5 2.5 1.1 8.9 0.1 2.4 1 1 1 2 2 2 2 Protein of unknown function (DUF295) DUF3736 PF12540.8 ORF105018 - 0.074 13.2 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3736) Polyoma_agno PF01736.16 ORF105018 - 0.088 12.6 0.1 0.68 9.7 0.0 2.0 2 0 0 2 2 2 0 Polyomavirus agnoprotein Longin PF13774.6 ORF103854 - 1.5e-06 28.1 0.0 2.1e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Regulated-SNARE-like domain Filament PF00038.21 ORF103220 - 0.0071 16.0 5.2 0.0082 15.8 5.2 1.0 1 0 0 1 1 1 1 Intermediate filament protein LSDAT_euk PF18139.1 ORF103220 - 0.054 12.9 0.1 0.079 12.3 0.1 1.2 1 0 0 1 1 1 0 SLOG in TRPM HALZ PF02183.18 ORF103220 - 0.074 13.3 6.9 0.68 10.2 0.4 2.4 2 0 0 2 2 2 0 Homeobox associated leucine zipper DUF1640 PF07798.11 ORF103220 - 0.094 12.8 6.9 1.2 9.1 1.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) YabA PF06156.13 ORF103220 - 0.17 12.5 8.2 3.4 8.4 2.1 2.1 1 1 1 2 2 2 0 Initiation control protein YabA IFP_35_N PF07334.13 ORF103220 - 0.58 10.3 4.3 0.89 9.7 0.4 2.2 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus bZIP_1 PF00170.21 ORF103220 - 0.65 10.1 7.1 6 7.0 0.4 2.3 2 0 0 2 2 2 0 bZIP transcription factor bZIP_2 PF07716.15 ORF103220 - 10 6.3 8.7 13 6.0 1.1 2.3 2 0 0 2 2 2 0 Basic region leucine zipper EndIII_4Fe-2S PF10576.9 ORF102864 - 0.16 12.4 1.7 0.9 10.0 0.5 2.3 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III sCache_2 PF17200.4 ORF10242 - 0.021 14.7 0.2 0.023 14.5 0.2 1.1 1 0 0 1 1 1 0 Single Cache domain 2 Ras PF00071.22 ORF102135 - 9.9e-08 31.7 0.3 1.3e-07 31.4 0.3 1.2 1 0 0 1 1 1 1 Ras family GTP_EFTU PF00009.27 ORF102135 - 0.011 15.3 0.3 0.015 14.9 0.3 1.2 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Arf PF00025.21 ORF102135 - 0.054 13.0 0.4 0.068 12.6 0.4 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family RIG-I_C PF18119.1 ORF102135 - 0.14 12.2 2.1 0.11 12.5 0.7 1.5 2 0 0 2 2 2 0 RIG-I receptor C-terminal domain SLATT_5 PF18160.1 ORF100443 - 0.12 11.7 4.5 0.15 11.4 4.5 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Cys_Met_Meta_PP PF01053.20 ORF100181 - 0.24 9.9 0.0 0.27 9.7 0.0 1.0 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme GCP_C_terminal PF04130.13 ORF100052 - 0.058 12.8 0.3 0.067 12.7 0.3 1.1 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal WW_1 PF18507.1 NODE_51487_length_352_cov_1.716088_g43575_i0reverse_frame_1 - 0.012 15.3 0.1 0.033 13.9 0.1 1.9 1 0 0 1 1 1 0 WW domain RNA_pol_Rpb1_R PF05001.13 NODE_51486_length_352_cov_1.741325_g43574_i0forward_frame_1 - 0.41 11.1 7.9 0.34 11.4 5.9 1.9 2 0 0 2 2 2 0 RNA polymerase Rpb1 C-terminal repeat Tuberin PF03542.16 NODE_51480_length_352_cov_1.952681_g43568_i0reverse_frame_1 - 0.045 12.9 0.1 0.058 12.5 0.1 1.2 1 0 0 1 1 1 0 Tuberin Utp21 PF04192.12 NODE_51480_length_352_cov_1.952681_g43568_i0reverse_frame_1 - 0.098 12.1 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Utp21 specific WD40 associated putative domain MTABC_N PF16185.5 NODE_51478_length_352_cov_2.015773_g43566_i0forward_frame_1 - 0.37 10.3 4.0 0.42 10.1 4.0 1.1 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region COXG PF06240.13 NODE_51469_length_352_cov_2.514196_g43557_i0reverse_frame_1 - 0.039 13.7 0.1 0.072 12.8 0.0 1.5 1 1 0 1 1 1 0 Carbon monoxide dehydrogenase subunit G (CoxG) DUF3781 PF12636.7 NODE_51469_length_352_cov_2.514196_g43557_i0reverse_frame_1 - 0.083 12.8 1.3 0.18 11.7 0.5 1.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3781) DUF1919 PF08942.10 NODE_51468_length_352_cov_2.526814_g43556_i0forward_frame_1 - 0.033 13.7 1.8 0.038 13.5 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1919) DUF3883 PF13020.6 NODE_51466_length_352_cov_2.772871_g43554_i0forward_frame_1 - 0.12 12.5 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3883) DivIC PF04977.15 NODE_51461_length_352_cov_3.482650_g43549_i0forward_frame_1 - 0.0021 17.8 0.2 0.003 17.3 0.2 1.3 1 0 0 1 1 1 1 Septum formation initiator Imm-NTF2 PF15655.6 NODE_51461_length_352_cov_3.482650_g43549_i0forward_frame_1 - 0.026 14.8 0.1 0.032 14.5 0.1 1.1 1 0 0 1 1 1 0 NTF2 fold immunity protein Response_reg PF00072.24 NODE_51460_length_352_cov_3.621451_g43548_i0reverse_frame_1 - 0.0066 16.6 0.1 0.0086 16.2 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain NBP1 PF08537.10 NODE_51457_length_352_cov_20.801262_g43545_i0reverse_frame_1 - 0.045 13.2 4.2 0.046 13.1 4.2 1.2 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 Vfa1 PF08432.10 NODE_51457_length_352_cov_20.801262_g43545_i0reverse_frame_1 - 4.5 7.6 9.6 5.7 7.2 9.6 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 tRNA_U5-meth_tr PF05958.11 NODE_51449_length_352_cov_74.438486_g43537_i0reverse_frame_1 - 0.00067 18.7 0.0 0.00082 18.5 0.0 1.1 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase 2OG-FeII_Oxy_3 PF13640.6 NODE_51445_length_352_cov_84.362776_g43533_i0forward_frame_1 - 1.6e-05 25.7 0.0 2e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 NODE_51445_length_352_cov_84.362776_g43533_i0forward_frame_1 - 0.053 13.9 0.0 0.065 13.7 0.0 1.2 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy PF03171.20 NODE_51445_length_352_cov_84.362776_g43533_i0forward_frame_1 - 0.058 13.9 0.0 0.075 13.5 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 NODE_51445_length_352_cov_84.362776_g43533_i0forward_frame_1 - 0.12 13.1 0.0 0.17 12.5 0.0 1.3 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Glyco_hydro2_C5 PF18565.1 NODE_51440_length_352_cov_93.091483_g43528_i0forward_frame_1 - 0.14 12.0 0.1 1.1 9.1 0.1 2.0 1 1 1 2 2 2 0 Glycoside hydrolase family 2 C-terminal domain 5 40S_S4_C PF16121.5 NODE_51439_length_352_cov_95.195584_g43527_i0reverse_frame_1 - 1.2e-24 85.7 0.0 1.5e-24 85.3 0.0 1.2 1 0 0 1 1 1 1 40S ribosomal protein S4 C-terminus BtpA PF03437.15 NODE_51438_length_352_cov_96.277603_g43526_i0reverse_frame_1 - 0.16 11.3 0.0 0.18 11.2 0.0 1.0 1 0 0 1 1 1 0 BtpA family ODV-E18 PF10717.9 NODE_51434_length_352_cov_117.154574_g43522_i0reverse_frame_1 - 0.081 12.8 2.1 0.13 12.1 2.1 1.3 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 TMEM154 PF15102.6 NODE_51434_length_352_cov_117.154574_g43522_i0reverse_frame_1 - 0.33 10.8 0.8 0.41 10.5 0.8 1.1 1 0 0 1 1 1 0 TMEM154 protein family RCC1_2 PF13540.6 NODE_51433_length_352_cov_120.375394_g43521_i0forward_frame_1 - 6.8e-06 25.8 1.8 0.0028 17.4 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat K_channel_TID PF07941.11 NODE_51433_length_352_cov_120.375394_g43521_i0forward_frame_1 - 8.8 6.9 9.0 3.2 8.3 1.7 2.2 1 1 1 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain TRL PF13146.6 NODE_51424_length_352_cov_251.517350_g43512_i0forward_frame_1 - 0.095 13.0 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 TRL-like protein family PAS_2 PF08446.11 NODE_51421_length_352_cov_352.883281_g43509_i0forward_frame_1 - 0.037 14.7 0.0 0.047 14.4 0.0 1.3 1 0 0 1 1 1 0 PAS fold # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks222.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks222.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks222.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks222.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RecA_dep_nuc PF16786.5 NODE_51418_length_353_cov_1.371069_g43506_i0forward_frame_1 - 0.025 14.7 0.2 1.1 9.5 0.0 2.1 2 0 0 2 2 2 0 Recombination enhancement, RecA-dependent nuclease PH_3 PF14593.6 NODE_51411_length_353_cov_1.937107_g43499_i0reverse_frame_1 - 0.014 15.5 0.6 0.019 15.1 0.6 1.2 1 0 0 1 1 1 0 PH domain Kelch_3 PF13415.6 NODE_51409_length_353_cov_2.006289_g43497_i0forward_frame_1 - 0.00015 21.9 0.2 0.0041 17.4 0.0 2.2 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_51409_length_353_cov_2.006289_g43497_i0forward_frame_1 - 0.0018 18.2 1.0 0.21 11.6 0.0 2.4 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_51409_length_353_cov_2.006289_g43497_i0forward_frame_1 - 0.0029 17.6 0.4 0.55 10.3 0.2 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain AdoMet_MTase PF07757.13 NODE_51404_length_353_cov_2.490566_g43492_i0forward_frame_1 - 0.007 16.7 0.1 0.0089 16.4 0.1 1.1 1 0 0 1 1 1 1 Predicted AdoMet-dependent methyltransferase zn-ribbon_14 PF16503.5 NODE_51395_length_353_cov_3.182390_g43483_i0reverse_frame_1 - 0.21 11.2 0.3 0.21 11.2 0.3 1.9 2 0 0 2 2 2 0 Zinc-ribbon MAP7 PF05672.11 NODE_51372_length_353_cov_70.924528_g43460_i0reverse_frame_1 - 0.0087 15.8 53.7 0.011 15.4 53.7 1.1 1 0 0 1 1 1 1 MAP7 (E-MAP-115) family TPD52 PF04201.15 NODE_51368_length_353_cov_77.650943_g43456_i0forward_frame_1 - 0.098 12.3 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Tumour protein D52 family 2TM PF13239.6 NODE_51366_length_353_cov_86.327044_g43454_i0reverse_frame_1 - 0.1 12.9 0.7 0.14 12.4 0.7 1.2 1 0 0 1 1 1 0 2TM domain GBP_C PF02841.14 NODE_51366_length_353_cov_86.327044_g43454_i0forward_frame_1 - 0.025 14.0 0.0 0.032 13.7 0.0 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain Not3 PF04065.15 NODE_51354_length_353_cov_158.396226_g43442_i0reverse_frame_1 - 0.0095 15.4 0.4 0.011 15.2 0.4 1.1 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component DUF1129 PF06570.11 NODE_51354_length_353_cov_158.396226_g43442_i0forward_frame_1 - 2.2 7.7 5.0 2.7 7.4 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Phage_holin_3_6 PF07332.11 NODE_51354_length_353_cov_158.396226_g43442_i0forward_frame_1 - 9.5 6.3 10.3 13 5.9 10.3 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3804 PF12707.7 NODE_51340_length_354_cov_1.225705_g43428_i0reverse_frame_1 - 0.053 13.2 0.4 0.082 12.6 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3804) DUF2079 PF09852.9 NODE_51340_length_354_cov_1.225705_g43428_i0forward_frame_1 - 0.069 12.0 0.9 0.074 11.9 0.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) PBP_sp32 PF07222.12 NODE_51331_length_354_cov_1.821317_g43419_i0reverse_frame_1 - 4.7 6.6 8.6 5.6 6.3 8.6 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Aldo_ket_red PF00248.21 NODE_51330_length_354_cov_1.868339_g43418_i0reverse_frame_1 - 0.0014 17.9 0.0 0.0018 17.5 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Lamprin PF06403.11 NODE_51327_length_354_cov_1.909091_g43415_i0forward_frame_1 - 0.13 12.2 2.8 0.16 12.0 2.8 1.1 1 0 0 1 1 1 0 Lamprin DUF3290 PF11694.8 NODE_51325_length_354_cov_2.034483_g43413_i0forward_frame_1 - 0.023 14.7 2.4 0.027 14.4 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DUF5358 PF17311.2 NODE_51314_length_354_cov_2.404389_g43402_i0reverse_frame_1 - 0.085 12.9 0.1 0.14 12.2 0.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5358) WSS_VP PF12175.8 NODE_51308_length_354_cov_3.018809_g43396_i0reverse_frame_1 - 0.062 12.7 0.1 0.084 12.3 0.1 1.1 1 0 0 1 1 1 0 White spot syndrome virus structural envelope protein VP P63C PF10546.9 NODE_51307_length_354_cov_3.025078_g43395_i0reverse_frame_1 - 0.12 13.0 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 P63C domain PMI_typeI PF01238.21 NODE_51306_length_354_cov_3.260188_g43394_i0reverse_frame_1 - 1.4e-42 146.2 0.0 1.6e-42 146.1 0.0 1.0 1 0 0 1 1 1 1 Phosphomannose isomerase type I MAS20 PF02064.15 NODE_51306_length_354_cov_3.260188_g43394_i0forward_frame_1 - 1.7 8.7 3.8 51 4.0 0.0 2.9 2 1 1 3 3 3 0 MAS20 protein import receptor NAM-associated PF14303.6 NODE_51302_length_354_cov_4.000000_g43390_i0reverse_frame_1 - 0.059 14.1 2.4 0.062 14.0 2.4 1.1 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain V-ATPase_H_N PF03224.14 NODE_51301_length_354_cov_4.463950_g43389_i0reverse_frame_1 - 0.053 12.8 0.3 0.057 12.7 0.3 1.1 1 0 0 1 1 1 0 V-ATPase subunit H Pkinase PF00069.25 NODE_51297_length_354_cov_26.909091_g43385_i0reverse_frame_1 - 1.3e-06 27.9 0.0 1.6e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Cytokin-bind PF09265.10 NODE_51297_length_354_cov_26.909091_g43385_i0reverse_frame_1 - 0.034 13.5 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding Claudin_3 PF06653.11 NODE_51295_length_354_cov_53.084639_g43383_i0reverse_frame_1 - 0.36 10.8 14.6 0.47 10.4 14.6 1.2 1 0 0 1 1 1 0 Tight junction protein, Claudin-like TP_methylase PF00590.20 NODE_51290_length_354_cov_69.009404_g43378_i0reverse_frame_1 - 1.5e-06 28.3 0.0 1.7e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF2101 PF09874.9 NODE_51290_length_354_cov_69.009404_g43378_i0forward_frame_1 - 8.9 5.9 12.4 10 5.8 12.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) SprA-related PF12118.8 NODE_51285_length_354_cov_80.068966_g43373_i0reverse_frame_1 - 0.06 12.5 5.1 0.067 12.3 5.1 1.0 1 0 0 1 1 1 0 SprA-related family Phospholamban PF04272.14 NODE_51283_length_354_cov_80.793103_g43371_i0reverse_frame_1 - 2.3 7.8 6.3 3.8 7.1 6.3 1.3 1 0 0 1 1 1 0 Phospholamban DUF1499 PF07386.11 NODE_51273_length_354_cov_109.084639_g43361_i0forward_frame_1 - 1.4e-17 64.3 0.0 2e-17 63.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) PIH1 PF08190.12 NODE_51261_length_354_cov_333.601881_g43349_i0reverse_frame_1 - 0.0023 17.4 4.1 0.19 11.2 0.8 2.1 1 1 1 2 2 2 2 PIH1 N-terminal domain CIMR PF00878.18 NODE_51261_length_354_cov_333.601881_g43349_i0reverse_frame_1 - 0.077 13.1 0.1 11 6.1 0.0 2.1 2 0 0 2 2 2 0 Cation-independent mannose-6-phosphate receptor repeat CYYR1 PF10873.8 NODE_51261_length_354_cov_333.601881_g43349_i0forward_frame_1 - 0.01 16.3 0.3 1.3 9.4 0.1 2.1 2 0 0 2 2 2 0 Cysteine and tyrosine-rich protein 1 Fiji_64_capsid PF05880.11 NODE_51257_length_354_cov_591.542320_g43346_i0reverse_frame_1 - 0.093 11.3 0.1 0.1 11.2 0.1 1.0 1 0 0 1 1 1 0 Fijivirus 64 kDa capsid protein DUF2924 PF11149.8 NODE_51257_length_354_cov_591.542320_g43346_i0forward_frame_1 - 0.016 15.6 0.0 0.02 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2924) DUF4345 PF14248.6 NODE_51251_length_355_cov_1.278125_g43341_i0forward_frame_3 - 0.023 14.6 0.9 0.029 14.3 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4345) BT1 PF03092.16 NODE_51251_length_355_cov_1.278125_g43341_i0forward_frame_3 - 0.035 12.4 1.7 0.041 12.1 1.7 1.1 1 0 0 1 1 1 0 BT1 family zf-CCHC_3 PF13917.6 NODE_51249_length_355_cov_1.528125_g43339_i0reverse_frame_2 - 0.002 18.0 1.4 0.0043 17.0 1.4 1.5 1 0 0 1 1 1 1 Zinc knuckle zf-RRN7 PF11781.8 NODE_51249_length_355_cov_1.528125_g43339_i0reverse_frame_2 - 5.1 6.9 5.8 4.1 7.2 1.3 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 ABC_trans_CmpB PF06541.11 NODE_51249_length_355_cov_1.528125_g43339_i0forward_frame_3 - 0.056 13.7 0.2 0.08 13.2 0.2 1.4 1 1 0 1 1 1 0 Putative ABC-transporter type IV STOP PF05217.12 NODE_51249_length_355_cov_1.528125_g43339_i0forward_frame_2 - 0.019 15.3 0.9 0.032 14.5 0.9 1.4 1 0 0 1 1 1 0 STOP protein DivIC PF04977.15 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.015 15.0 0.4 0.015 15.0 0.4 2.1 2 0 0 2 2 2 0 Septum formation initiator Cnn_1N PF07989.11 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.043 14.0 0.6 0.043 14.0 0.6 2.1 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 GIT_CC PF16559.5 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.047 13.6 0.1 0.047 13.6 0.1 1.6 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor HALZ PF02183.18 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.056 13.7 0.5 0.056 13.7 0.5 2.0 2 0 0 2 2 2 0 Homeobox associated leucine zipper bZIP_2 PF07716.15 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 0.13 12.4 0.6 0.13 12.4 0.6 2.2 2 0 0 2 2 2 0 Basic region leucine zipper bZIP_1 PF00170.21 NODE_51247_length_355_cov_1.565625_g43337_i0reverse_frame_2 - 2.8 8.1 6.9 0.38 10.9 0.9 2.1 2 0 0 2 2 2 0 bZIP transcription factor RNA_pol_Rpb1_2 PF00623.20 NODE_51245_length_355_cov_1.618750_g43335_i0reverse_frame_3 - 6.3e-28 98.1 0.0 8.7e-26 91.1 0.0 2.0 1 1 1 2 2 2 2 RNA polymerase Rpb1, domain 2 Mob_synth_C PF06463.13 NODE_51237_length_355_cov_1.940625_g43327_i0reverse_frame_2 - 0.0079 16.1 2.7 0.011 15.7 2.4 1.4 1 1 0 1 1 1 1 Molybdenum Cofactor Synthesis C DUF1392 PF07154.11 NODE_51237_length_355_cov_1.940625_g43327_i0reverse_frame_2 - 0.049 13.7 2.1 0.074 13.2 1.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1392) Srg PF02118.21 NODE_51232_length_355_cov_2.231250_g43322_i0forward_frame_2 - 0.03 14.0 0.2 0.036 13.7 0.2 1.2 1 0 0 1 1 1 0 Srg family chemoreceptor MSL2-CXC PF16682.5 NODE_51231_length_355_cov_2.271875_g43321_i0reverse_frame_3 - 0.017 15.2 0.8 0.017 15.2 0.8 2.4 3 0 0 3 3 3 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Toxin_25 PF08095.11 NODE_51231_length_355_cov_2.271875_g43321_i0reverse_frame_2 - 0.53 10.3 4.4 1.4 9.0 4.4 1.7 1 0 0 1 1 1 0 Hefutoxin family HELP PF03451.14 NODE_51230_length_355_cov_2.296875_g43320_i0reverse_frame_3 - 0.034 14.0 0.0 0.048 13.5 0.0 1.2 1 0 0 1 1 1 0 HELP motif Toxin_35 PF10530.9 NODE_51229_length_355_cov_2.318750_g43319_i0forward_frame_3 - 1.1 9.3 10.9 7.3 6.7 4.0 2.5 2 0 0 2 2 2 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold DUF5339 PF17274.2 NODE_51226_length_355_cov_2.490625_g43316_i0reverse_frame_3 - 0.19 12.6 4.7 0.23 12.3 3.8 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5339) AGT PF11440.8 NODE_51226_length_355_cov_2.490625_g43316_i0forward_frame_2 - 0.022 13.8 0.1 0.023 13.7 0.1 1.1 1 0 0 1 1 1 0 DNA alpha-glucosyltransferase Lipoprotein_X PF03305.13 NODE_51225_length_355_cov_2.678125_g43315_i0forward_frame_3 - 0.0023 17.7 0.1 0.0029 17.4 0.1 1.2 1 0 0 1 1 1 1 Mycoplasma MG185/MG260 protein DUF1700 PF08006.11 NODE_51223_length_355_cov_2.731250_g43313_i0forward_frame_3 - 0.68 9.4 4.6 0.78 9.2 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) MotA_ExbB PF01618.16 NODE_51222_length_355_cov_2.865625_g43312_i0reverse_frame_3 - 0.044 13.5 0.2 0.057 13.2 0.2 1.3 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family DUF3399 PF11879.8 NODE_51222_length_355_cov_2.865625_g43312_i0reverse_frame_2 - 0.2 12.0 4.3 0.27 11.6 4.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) TssN PF17555.2 NODE_51220_length_355_cov_3.021875_g43310_i0forward_frame_2 - 0.11 11.9 4.5 0.51 9.7 4.5 1.8 1 1 0 1 1 1 0 Type VI secretion system, TssN RIIa PF02197.17 NODE_51220_length_355_cov_3.021875_g43310_i0forward_frame_2 - 0.12 12.0 0.1 0.24 11.1 0.1 1.5 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit IL17_R_N PF15037.6 NODE_51218_length_355_cov_3.196875_g43308_i0reverse_frame_2 - 0.11 11.4 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Interleukin-17 receptor extracellular region Exonuc_VII_S PF02609.16 NODE_51217_length_355_cov_3.234375_g43307_i0reverse_frame_3 - 0.0071 16.4 0.1 0.014 15.5 0.1 1.4 1 0 0 1 1 1 1 Exonuclease VII small subunit HAD_SAK_2 PF18143.1 NODE_51217_length_355_cov_3.234375_g43307_i0reverse_frame_3 - 0.073 13.4 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 HAD domain in Swiss Army Knife RNA repair proteins GLEYA PF10528.9 NODE_51209_length_355_cov_5.740625_g43299_i0forward_frame_2 - 1.8e-06 28.3 1.9 2.2e-06 28.0 1.9 1.1 1 0 0 1 1 1 1 GLEYA domain PA14 PF07691.12 NODE_51209_length_355_cov_5.740625_g43299_i0forward_frame_2 - 0.00032 20.5 0.4 0.00061 19.6 0.4 1.4 1 1 0 1 1 1 1 PA14 domain SSF PF00474.17 NODE_51208_length_355_cov_5.950000_g43298_i0forward_frame_2 - 1.1e-16 60.7 2.0 1.2e-16 60.6 2.0 1.0 1 0 0 1 1 1 1 Sodium:solute symporter family Pkinase PF00069.25 NODE_51207_length_355_cov_8.562500_g43297_i0reverse_frame_2 - 3.1e-05 23.5 0.0 4e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain ubiquitin PF00240.23 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 7.1e-40 134.6 6.8 7.7e-34 115.3 0.3 2.9 3 0 0 3 3 3 2 Ubiquitin family Rad60-SLD PF11976.8 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 7.5e-17 60.9 5.1 9.9e-16 57.3 0.7 2.7 3 0 0 3 3 3 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 1.8e-06 28.3 0.3 0.00011 22.5 0.1 2.8 2 1 0 2 2 2 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.0022 18.3 0.4 0.0034 17.7 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.0033 17.5 0.3 0.0082 16.2 0.3 1.8 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like TBK1_ULD PF18396.1 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.0038 17.1 0.0 0.0053 16.7 0.0 1.4 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_4 PF18036.1 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.0064 16.5 1.9 5.8 7.0 0.0 3.0 3 0 0 3 3 3 2 Ubiquitin-like domain DUF2407 PF10302.9 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.012 16.2 0.3 0.015 15.9 0.3 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.045 13.6 0.7 0.28 11.0 0.1 2.1 1 1 1 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain Methyltrans_RNA PF04452.14 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.065 12.6 0.1 0.49 9.7 0.0 1.9 2 0 0 2 2 2 0 RNA methyltransferase DUF2170 PF09938.9 NODE_51205_length_355_cov_37.112500_g43295_i0reverse_frame_3 - 0.12 12.1 0.0 15 5.3 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2170) DUF4257 PF14074.6 NODE_51205_length_355_cov_37.112500_g43295_i0forward_frame_3 - 0.0027 17.9 0.0 0.11 12.7 0.0 2.3 2 1 0 2 2 2 1 Protein of unknown function (DUF4257) TM1506 PF08973.10 NODE_51205_length_355_cov_37.112500_g43295_i0forward_frame_3 - 0.013 15.2 0.0 1.7 8.3 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1893) ubiquitin PF00240.23 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 7.1e-40 134.6 6.8 7.7e-34 115.3 0.3 2.9 3 0 0 3 3 3 2 Ubiquitin family Rad60-SLD PF11976.8 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 7.5e-17 60.9 5.1 9.9e-16 57.3 0.7 2.7 3 0 0 3 3 3 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 1.8e-06 28.3 0.3 0.00011 22.5 0.1 2.8 2 1 0 2 2 2 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.0022 18.3 0.4 0.0034 17.7 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.0033 17.5 0.3 0.0082 16.2 0.3 1.8 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like TBK1_ULD PF18396.1 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.0038 17.1 0.0 0.0053 16.7 0.0 1.4 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_4 PF18036.1 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.0064 16.5 1.9 5.8 7.0 0.0 3.0 3 0 0 3 3 3 2 Ubiquitin-like domain DUF2407 PF10302.9 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.012 16.2 0.3 0.015 15.9 0.3 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.045 13.6 0.7 0.28 11.0 0.1 2.1 1 1 1 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain Methyltrans_RNA PF04452.14 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.065 12.6 0.1 0.49 9.7 0.0 1.9 2 0 0 2 2 2 0 RNA methyltransferase DUF2170 PF09938.9 NODE_51204_length_355_cov_37.487500_g43294_i0reverse_frame_3 - 0.12 12.1 0.0 15 5.3 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2170) CNP1 PF08750.11 NODE_51202_length_355_cov_52.621875_g43292_i0reverse_frame_2 - 0.091 12.7 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 CNP1-like family Ribosomal_S18 PF01084.20 NODE_51198_length_355_cov_60.703125_g43288_i0reverse_frame_2 - 0.12 12.6 1.8 0.16 12.2 1.1 1.6 1 1 0 1 1 1 0 Ribosomal protein S18 NKAIN PF05640.14 NODE_51197_length_355_cov_60.896875_g43287_i0reverse_frame_3 - 0.012 14.9 0.0 0.015 14.6 0.0 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein RecG_N PF17190.4 NODE_51192_length_355_cov_66.425000_g43282_i0reverse_frame_2 - 0.0065 17.2 0.2 0.011 16.5 0.2 1.4 1 0 0 1 1 1 1 RecG N-terminal helical domain FeS PF04060.13 NODE_51192_length_355_cov_66.425000_g43282_i0reverse_frame_2 - 5 6.9 7.1 1.3 8.8 2.4 2.1 2 0 0 2 2 2 0 Putative Fe-S cluster DNA_pol_B_exo1 PF03104.19 NODE_51191_length_355_cov_72.562500_g43281_i0forward_frame_2 - 3.1e-06 26.5 0.4 3.5e-06 26.4 0.4 1.0 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain Lentivirus_VIF PF05851.11 NODE_51191_length_355_cov_72.562500_g43281_i0forward_frame_2 - 0.059 12.3 0.5 0.11 11.3 0.2 1.5 1 1 1 2 2 2 0 Lentivirus virion infectivity factor (VIF) PUFD PF16553.5 NODE_51191_length_355_cov_72.562500_g43281_i0forward_frame_2 - 0.088 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 BCORL-PCGF1-binding domain Ank_2 PF12796.7 NODE_51185_length_355_cov_80.325000_g43275_i0reverse_frame_3 - 5.4e-14 52.6 0.0 2.9e-10 40.6 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_51185_length_355_cov_80.325000_g43275_i0reverse_frame_3 - 1.7e-13 50.5 0.0 1.3e-05 25.4 0.0 2.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_51185_length_355_cov_80.325000_g43275_i0reverse_frame_3 - 2.7e-09 37.4 0.0 0.00015 22.3 0.0 2.9 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_51185_length_355_cov_80.325000_g43275_i0reverse_frame_3 - 2.5e-07 30.8 0.0 0.065 13.7 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_51185_length_355_cov_80.325000_g43275_i0reverse_frame_3 - 2.2e-06 27.6 0.0 0.14 12.8 0.0 3.2 3 1 0 3 3 3 2 Ankyrin repeat Gate PF07670.14 NODE_51174_length_355_cov_147.140625_g43264_i0forward_frame_2 - 0.066 13.5 0.3 0.075 13.3 0.3 1.2 1 0 0 1 1 1 0 Nucleoside recognition Paf1 PF03985.13 NODE_51173_length_355_cov_149.743750_g43263_i0reverse_frame_2 - 0.23 10.4 6.6 0.24 10.3 6.6 1.0 1 0 0 1 1 1 0 Paf1 Ribosomal_60s PF00428.19 NODE_51173_length_355_cov_149.743750_g43263_i0reverse_frame_2 - 6.6 7.4 9.9 0.062 13.9 2.5 1.6 2 0 0 2 2 2 0 60s Acidic ribosomal protein CDC45 PF02724.14 NODE_51173_length_355_cov_149.743750_g43263_i0reverse_frame_2 - 8.1 4.6 9.6 8 4.6 9.6 1.0 1 0 0 1 1 1 0 CDC45-like protein Septum_form PF13845.6 NODE_51173_length_355_cov_149.743750_g43263_i0forward_frame_2 - 0.015 14.8 0.0 0.017 14.6 0.0 1.0 1 0 0 1 1 1 0 Septum formation EB1_binding PF05937.11 NODE_51173_length_355_cov_149.743750_g43263_i0forward_frame_2 - 0.42 11.2 3.0 0.7 10.5 0.1 1.9 1 1 1 2 2 2 0 EB-1 Binding Domain Ribosomal_S25 PF03297.15 NODE_51163_length_355_cov_859.412500_g43254_i0reverse_frame_2 - 4.1e-36 123.2 8.1 4.6e-36 123.1 8.1 1.0 1 0 0 1 1 1 1 S25 ribosomal protein Fe_dep_repress PF01325.19 NODE_51163_length_355_cov_859.412500_g43254_i0reverse_frame_2 - 0.0036 17.5 0.3 0.018 15.2 0.2 1.9 1 1 1 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 NODE_51163_length_355_cov_859.412500_g43254_i0reverse_frame_2 - 0.052 13.1 0.0 0.071 12.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MRF_C1 PF13887.6 NODE_51160_length_355_cov_3512.378125_g43251_i0reverse_frame_2 - 0.14 11.3 0.0 0.25 10.5 0.0 1.3 1 0 0 1 1 1 0 Myelin gene regulatory factor -C-terminal domain 1 TB2_DP1_HVA22 PF03134.19 NODE_51159_length_355_cov_11029.965625_g43250_i0reverse_frame_2 - 2.5e-06 27.3 0.2 2.5e-06 27.3 0.2 1.8 1 1 1 2 2 2 1 TB2/DP1, HVA22 family FtsX PF02687.21 NODE_51159_length_355_cov_11029.965625_g43250_i0reverse_frame_2 - 0.1 13.1 2.0 0.18 12.3 1.9 1.5 1 1 0 1 1 1 0 FtsX-like permease family DUF3899 PF13038.6 NODE_51159_length_355_cov_11029.965625_g43250_i0reverse_frame_2 - 0.33 11.5 5.4 0.3 11.6 3.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3899) GBR2_CC PF18455.1 NODE_51154_length_356_cov_1.467290_g43245_i0reverse_frame_3 - 0.15 12.2 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain Sgf11 PF08209.11 NODE_51154_length_356_cov_1.467290_g43245_i0forward_frame_2 - 1.8 8.2 5.1 0.72 9.5 1.5 2.0 1 1 1 2 2 2 0 Sgf11 (transcriptional regulation protein) MutS_IV PF05190.18 NODE_51152_length_356_cov_1.663551_g43243_i0forward_frame_3 - 3.6e-08 33.7 3.1 4.2e-08 33.4 3.1 1.1 1 0 0 1 1 1 1 MutS family domain IV RFX5_N PF18326.1 NODE_51152_length_356_cov_1.663551_g43243_i0forward_frame_3 - 0.013 15.2 1.2 3 7.7 0.0 2.3 2 0 0 2 2 2 0 RFX5 N-terminal domain DUF3346 PF11826.8 NODE_51152_length_356_cov_1.663551_g43243_i0forward_frame_3 - 0.019 14.8 0.3 0.022 14.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) DUF4714 PF15833.5 NODE_51146_length_356_cov_1.990654_g43237_i0forward_frame_3 - 0.23 11.4 1.9 0.31 11.0 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) DUF2633 PF11119.8 NODE_51146_length_356_cov_1.990654_g43237_i0forward_frame_3 - 7.3 6.6 8.7 0.38 10.7 1.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2633) DUF1018 PF06252.12 NODE_51143_length_356_cov_2.121495_g43234_i0forward_frame_3 - 0.42 11.6 2.8 0.53 11.3 2.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1018) PhoLip_ATPase_N PF16209.5 NODE_51140_length_356_cov_2.264798_g43231_i0forward_frame_3 - 0.029 14.1 3.4 0.029 14.1 3.4 1.9 2 0 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal SPR1 PF15356.6 NODE_51137_length_356_cov_2.370717_g43228_i0reverse_frame_3 - 1.5 9.3 16.2 2 9.0 16.2 1.1 1 0 0 1 1 1 0 Psoriasis susceptibility locus 2 Viral_DNA_bi PF02236.17 NODE_51137_length_356_cov_2.370717_g43228_i0reverse_frame_2 - 0.086 13.0 0.1 0.25 11.6 0.1 1.7 2 0 0 2 2 2 0 Viral DNA-binding protein, all alpha domain YWFCY PF14293.6 NODE_51132_length_356_cov_2.542056_g43223_i0reverse_frame_3 - 0.4 11.0 4.5 0.27 11.6 1.6 2.0 2 0 0 2 2 2 0 YWFCY protein DUF4329 PF14220.6 NODE_51128_length_356_cov_2.610592_g43219_i0reverse_frame_3 - 6.3e-34 116.5 0.5 6.9e-34 116.4 0.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4329) BACON PF13004.7 NODE_51127_length_356_cov_2.672897_g43218_i0reverse_frame_3 - 0.23 11.5 0.1 0.32 11.0 0.1 1.2 1 0 0 1 1 1 0 Putative binding domain, N-terminal RVT_1 PF00078.27 NODE_51127_length_356_cov_2.672897_g43218_i0forward_frame_3 - 0.0019 17.8 0.0 0.0021 17.6 0.0 1.2 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) LRR_5 PF13306.6 NODE_51124_length_356_cov_2.732087_g43215_i0forward_frame_2 - 0.08 12.9 0.9 0.48 10.4 0.9 1.9 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) Ion_trans PF00520.31 NODE_51122_length_356_cov_2.844237_g43213_i0forward_frame_3 - 4.7e-06 26.0 8.6 5.7e-06 25.7 8.6 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 NODE_51122_length_356_cov_2.844237_g43213_i0forward_frame_3 - 0.0088 14.8 9.3 0.01 14.5 9.3 1.0 1 0 0 1 1 1 1 Polycystin cation channel DUF285 PF03382.14 NODE_51118_length_356_cov_3.127726_g43209_i0reverse_frame_3 - 0.15 11.8 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Mycoplasma protein of unknown function, DUF285 zf-C4_ClpX PF06689.13 NODE_51116_length_356_cov_3.454829_g43207_i0reverse_frame_2 - 1.2 9.0 14.3 4.2 7.3 0.1 3.3 3 0 0 3 3 3 0 ClpX C4-type zinc finger Cys_rich_VLP PF14194.6 NODE_51108_length_356_cov_50.498442_g43199_i0reverse_frame_3 - 0.15 12.2 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 Cysteine-rich VLP zf_PR_Knuckle PF18445.1 NODE_51108_length_356_cov_50.498442_g43199_i0forward_frame_2 - 0.087 12.6 0.2 0.087 12.6 0.2 1.8 2 0 0 2 2 2 0 PR zinc knuckle motif IL17R_D_N PF16742.5 NODE_51105_length_356_cov_57.551402_g43196_i0reverse_frame_3 - 0.015 15.3 0.1 0.021 14.8 0.1 1.3 1 0 0 1 1 1 0 N-terminus of interleukin 17 receptor D TMEM132D_C PF15706.5 NODE_51105_length_356_cov_57.551402_g43196_i0forward_frame_3 - 0.035 13.9 0.2 0.035 13.9 0.2 1.6 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF2119 PF09892.9 NODE_51102_length_356_cov_61.697819_g43193_i0forward_frame_2 - 0.054 12.9 0.4 0.072 12.5 0.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2119) Ank_4 PF13637.6 NODE_51101_length_356_cov_70.370717_g43192_i0forward_frame_2 - 3.6e-06 27.4 0.1 5.6e-06 26.8 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_51101_length_356_cov_70.370717_g43192_i0forward_frame_2 - 1.7e-05 25.3 0.0 2.3e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_51101_length_356_cov_70.370717_g43192_i0forward_frame_2 - 0.0056 17.0 0.7 0.22 11.9 0.1 1.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_51101_length_356_cov_70.370717_g43192_i0forward_frame_2 - 0.014 15.8 2.4 1 9.9 0.5 2.4 1 1 1 2 2 2 0 Ankyrin repeat ATG27 PF09451.10 NODE_51098_length_356_cov_73.962617_g43189_i0forward_frame_2 - 0.07 13.0 0.2 0.096 12.5 0.2 1.1 1 0 0 1 1 1 0 Autophagy-related protein 27 WHH PF14414.6 NODE_51097_length_356_cov_74.034268_g43188_i0reverse_frame_3 - 0.1 12.4 1.0 0.2 11.5 1.0 1.4 1 0 0 1 1 1 0 A nuclease of the HNH/ENDO VII superfamily with conserved WHH TruD PF01142.18 NODE_51097_length_356_cov_74.034268_g43188_i0forward_frame_2 - 0.23 10.2 0.0 0.25 10.1 0.0 1.0 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) AbiEi_3_N PF17194.4 NODE_51096_length_356_cov_74.566978_g43187_i0reverse_frame_3 - 0.23 11.5 0.0 0.3 11.1 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin N-terminal domain DUF1932 PF09130.11 NODE_51096_length_356_cov_74.566978_g43187_i0forward_frame_3 - 0.064 13.2 4.1 0.13 12.3 4.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) Ku_C PF03730.14 NODE_51096_length_356_cov_74.566978_g43187_i0forward_frame_3 - 0.11 13.2 8.2 0.16 12.7 8.2 1.3 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm Peptidase_C37 PF05416.12 NODE_51096_length_356_cov_74.566978_g43187_i0forward_frame_3 - 0.17 10.4 7.8 0.17 10.3 7.8 1.0 1 0 0 1 1 1 0 Southampton virus-type processing peptidase IQ PF00612.27 NODE_51095_length_356_cov_77.937695_g43186_i0reverse_frame_3 - 2.3 8.2 0.0 2.3 8.2 0.0 3.0 3 1 1 4 4 4 0 IQ calmodulin-binding motif CotJB PF12652.7 NODE_51091_length_356_cov_86.211838_g43182_i0forward_frame_2 - 0.11 12.7 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 CotJB protein TPR_14 PF13428.6 NODE_51084_length_356_cov_100.177570_g43175_i0reverse_frame_3 - 0.021 15.6 0.9 0.021 15.6 0.9 2.0 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF979 PF06166.12 NODE_51079_length_356_cov_109.654206_g43170_i0reverse_frame_3 - 0.038 13.2 0.2 0.054 12.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF979) DUF3678 PF12435.8 NODE_51076_length_356_cov_115.445483_g43167_i0forward_frame_3 - 3.6 7.0 6.5 1.1 8.6 1.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) FtsX PF02687.21 NODE_51076_length_356_cov_115.445483_g43167_i0forward_frame_2 - 4.5 7.8 9.7 0.24 11.9 4.4 1.5 2 0 0 2 2 2 0 FtsX-like permease family NurA PF09376.10 NODE_51074_length_356_cov_119.099688_g43165_i0reverse_frame_3 - 0.023 14.4 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 NurA domain Pkinase PF00069.25 NODE_51064_length_356_cov_310.894081_g43155_i0reverse_frame_3 - 0.0016 17.9 0.0 0.0017 17.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Fer4_19 PF06902.11 NODE_51062_length_356_cov_332.208723_g35859_i1reverse_frame_3 - 0.26 11.4 4.1 1.5 9.0 0.5 2.8 3 0 0 3 3 3 0 Divergent 4Fe-4S mono-cluster APOC4 PF15119.6 NODE_51056_length_357_cov_1.239130_g43148_i0reverse_frame_3 - 0.05 13.9 0.0 0.063 13.5 0.0 1.2 1 0 0 1 1 1 0 Apolipoprotein C4 YnfE PF17452.2 NODE_51056_length_357_cov_1.239130_g43148_i0reverse_frame_3 - 0.21 11.9 6.3 0.43 10.9 5.9 1.7 1 1 1 2 2 2 0 Uncharacterized YnfE-like Bee_toxin PF17454.2 NODE_51056_length_357_cov_1.239130_g43148_i0forward_frame_3 - 2 8.5 9.4 1.8 8.6 7.5 2.0 1 1 1 2 2 2 0 Honey bee toxin UBA2_C PF16195.5 NODE_51055_length_357_cov_1.245342_g43147_i0reverse_frame_3 - 0.89 10.3 6.7 1.1 9.9 6.7 1.1 1 0 0 1 1 1 0 SUMO-activating enzyme subunit 2 C-terminus M-factor PF03855.13 NODE_51055_length_357_cov_1.245342_g43147_i0reverse_frame_2 - 0.009 16.1 0.1 0.025 14.7 0.0 1.7 2 0 0 2 2 2 1 M-factor DUF2593 PF10767.9 NODE_51049_length_357_cov_1.850932_g43141_i0reverse_frame_3 - 0.87 9.7 6.0 5 7.2 6.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2593) FG-GAP PF01839.23 NODE_51049_length_357_cov_1.850932_g43141_i0forward_frame_2 - 0.00057 20.0 0.0 0.0013 18.8 0.0 1.7 1 0 0 1 1 1 1 FG-GAP repeat VCBS PF13517.6 NODE_51049_length_357_cov_1.850932_g43141_i0forward_frame_2 - 0.0016 19.0 0.1 0.0074 16.8 0.1 2.1 1 1 0 1 1 1 1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella DUF5381 PF17353.2 NODE_51046_length_357_cov_2.086957_g43138_i0forward_frame_3 - 0.014 15.1 0.5 0.017 14.9 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) UPF0542 PF15086.6 NODE_51046_length_357_cov_2.086957_g43138_i0forward_frame_2 - 0.027 14.4 0.6 0.067 13.1 0.1 2.0 1 1 2 3 3 3 0 Uncharacterised protein family UPF0542 DUF1218 PF06749.12 NODE_51046_length_357_cov_2.086957_g43138_i0forward_frame_2 - 0.13 12.7 1.2 0.19 12.3 0.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1218) DUF3007 PF11460.8 NODE_51046_length_357_cov_2.086957_g43138_i0forward_frame_2 - 0.15 12.4 1.4 0.21 11.9 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3007) zf-C3HC4_3 PF13920.6 NODE_51044_length_357_cov_2.301242_g43136_i0forward_frame_3 - 0.00017 21.4 14.1 0.00017 21.4 14.1 2.4 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) ADH_zinc_N PF00107.26 NODE_51042_length_357_cov_2.453416_g43134_i0forward_frame_2 - 0.0088 16.0 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 NODE_51042_length_357_cov_2.453416_g43134_i0forward_frame_2 - 0.015 16.4 0.0 0.017 16.1 0.0 1.1 1 0 0 1 1 1 0 Zinc-binding dehydrogenase PDT PF00800.18 NODE_51042_length_357_cov_2.453416_g43134_i0forward_frame_2 - 0.04 13.7 0.0 0.059 13.2 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydratase PRA-PH PF01503.17 NODE_51041_length_357_cov_2.583851_g43133_i0reverse_frame_3 - 1.3e-14 54.4 0.1 1.6e-14 54.1 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 NODE_51041_length_357_cov_2.583851_g43133_i0reverse_frame_3 - 0.015 15.5 0.1 0.019 15.1 0.1 1.2 1 0 0 1 1 1 0 MazG nucleotide pyrophosphohydrolase domain FBD PF08387.10 NODE_51041_length_357_cov_2.583851_g43133_i0forward_frame_2 - 0.11 12.4 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 FBD TAT_signal PF10518.9 NODE_51040_length_357_cov_2.956522_g43132_i0forward_frame_3 - 0.00041 20.1 1.0 0.00074 19.3 1.0 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence MdoG PF04349.12 NODE_51040_length_357_cov_2.956522_g43132_i0forward_frame_3 - 0.059 12.3 0.0 0.074 12.0 0.0 1.1 1 0 0 1 1 1 0 Periplasmic glucan biosynthesis protein, MdoG MAGSP PF03082.14 NODE_51039_length_357_cov_2.965839_g43131_i0reverse_frame_2 - 0.0039 16.8 0.2 0.0047 16.6 0.2 1.1 1 0 0 1 1 1 1 Male accessory gland secretory protein DUF2527 PF10736.9 NODE_51035_length_357_cov_3.347826_g43127_i0reverse_frame_2 - 0.033 14.0 0.1 0.059 13.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) Dzip-like_N PF13815.6 NODE_51035_length_357_cov_3.347826_g43127_i0forward_frame_2 - 1.5e-06 28.2 0.6 2.5e-06 27.5 0.6 1.3 1 0 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal zf-C2H2_3rep PF18868.1 NODE_51035_length_357_cov_3.347826_g43127_i0forward_frame_2 - 0.007 17.0 0.2 0.008 16.9 0.2 1.2 1 0 0 1 1 1 1 Zinc finger C2H2-type, 3 repeats YMF19 PF02326.15 NODE_51035_length_357_cov_3.347826_g43127_i0forward_frame_2 - 0.064 14.0 0.5 0.17 12.7 0.3 1.6 2 0 0 2 2 2 0 Plant ATP synthase F0 zf-C2H2_4 PF13894.6 NODE_51035_length_357_cov_3.347826_g43127_i0forward_frame_2 - 0.23 12.4 4.3 0.46 11.5 4.3 1.6 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_51035_length_357_cov_3.347826_g43127_i0forward_frame_2 - 0.6 10.7 4.4 1.1 9.9 4.4 1.4 1 0 0 1 1 1 0 Zinc finger, C2H2 type RNA_pol_Rpb2_3 PF04565.16 NODE_51032_length_357_cov_3.602484_g43124_i0reverse_frame_3 - 0.0066 16.6 0.9 0.013 15.7 0.9 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 Lipase_2 PF01674.18 NODE_51032_length_357_cov_3.602484_g43124_i0reverse_frame_2 - 0.23 10.9 1.9 0.26 10.8 1.9 1.1 1 0 0 1 1 1 0 Lipase (class 2) DUF4981 PF16353.5 NODE_51030_length_357_cov_4.649068_g43122_i0reverse_frame_3 - 0.083 13.4 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function(DUF4981) DUF2530 PF10745.9 NODE_51029_length_357_cov_4.944099_g43121_i0reverse_frame_2 - 0.17 12.2 0.5 0.32 11.3 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) DUF2417 PF10329.9 NODE_51029_length_357_cov_4.944099_g43121_i0reverse_frame_2 - 7.6 5.9 9.3 0.94 8.8 4.8 1.6 2 0 0 2 2 2 0 Region of unknown function (DUF2417) PT PF04886.12 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_3 - 2 8.0 19.4 29 4.3 7.0 3.9 1 1 1 2 2 2 0 PT repeat FAM60A PF15396.6 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_3 - 3.2 7.7 11.1 3.9 7.4 11.1 1.0 1 0 0 1 1 1 0 Protein Family FAM60A DUF4554 PF15091.6 NODE_51027_length_357_cov_5.335404_g43119_i0reverse_frame_2 - 0.8 8.5 7.6 0.88 8.4 7.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) G3P_acyltransf PF02660.15 NODE_51027_length_357_cov_5.335404_g43119_i0forward_frame_3 - 0.67 10.0 6.0 0.76 9.8 6.0 1.1 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase TM_helix PF05552.12 NODE_51027_length_357_cov_5.335404_g43119_i0forward_frame_2 - 5 7.2 8.3 12 6.0 3.0 3.3 2 1 1 3 3 3 0 Conserved TM helix Cylicin_N PF15241.6 NODE_51025_length_357_cov_9.891304_g43117_i0reverse_frame_3 - 0.1 12.8 1.2 0.32 11.2 1.0 1.9 1 1 1 2 2 2 0 Cylicin N-terminus Chi-conotoxin PF16981.5 NODE_51025_length_357_cov_9.891304_g43117_i0reverse_frame_2 - 0.55 10.5 4.2 0.66 10.2 0.0 2.6 3 1 1 4 4 4 0 chi-Conotoxin or t superfamily Mac-1 PF09028.10 NODE_51025_length_357_cov_9.891304_g43117_i0forward_frame_3 - 0.16 11.0 0.1 0.23 10.5 0.1 1.2 1 0 0 1 1 1 0 Mac 1 DUF2207 PF09972.9 NODE_51024_length_357_cov_11.885093_g43116_i0reverse_frame_2 - 2.5 6.8 6.5 2.6 6.7 6.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TraV PF09676.10 NODE_51024_length_357_cov_11.885093_g43116_i0forward_frame_3 - 0.018 16.0 2.3 0.025 15.6 2.3 1.2 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) Spo12 PF05032.12 NODE_51023_length_357_cov_15.350932_g43115_i0reverse_frame_2 - 0.071 13.0 0.4 0.81 9.6 0.1 2.3 2 0 0 2 2 2 0 Spo12 family DUF5408 PF17402.2 NODE_51023_length_357_cov_15.350932_g43115_i0forward_frame_2 - 0.35 10.8 1.8 0.48 10.3 0.0 2.0 2 1 0 2 2 2 0 Family of unknown function (DUF5408) CbiQ PF02361.16 NODE_51017_length_357_cov_55.242236_g43109_i0forward_frame_3 - 0.088 12.4 0.1 0.14 11.7 0.1 1.3 1 1 0 1 1 1 0 Cobalt transport protein Pescadillo_N PF06732.11 NODE_51016_length_357_cov_58.953416_g43108_i0reverse_frame_3 - 0.012 15.2 0.1 0.016 14.8 0.1 1.1 1 0 0 1 1 1 0 Pescadillo N-terminus CDC14 PF08045.11 NODE_51016_length_357_cov_58.953416_g43108_i0forward_frame_2 - 0.17 10.9 0.1 0.23 10.5 0.1 1.1 1 0 0 1 1 1 0 Cell division control protein 14, SIN component Antifungal_pept PF11410.8 NODE_51015_length_357_cov_61.164596_g43107_i0forward_frame_2 - 0.89 9.5 7.9 0.3 11.0 3.9 2.1 2 0 0 2 2 2 0 Antifungal peptide CPBP PF02517.16 NODE_51014_length_357_cov_63.832298_g43106_i0reverse_frame_3 - 2.7 8.4 7.6 4.2 7.8 7.6 1.5 1 1 0 1 1 1 0 CPBP intramembrane metalloprotease YfhO PF09586.10 NODE_51014_length_357_cov_63.832298_g43106_i0reverse_frame_3 - 5.1 5.2 9.6 5.8 5.0 9.6 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Sel1 PF08238.12 NODE_51011_length_357_cov_73.024845_g43103_i0forward_frame_2 - 8.3e-05 23.1 0.1 0.44 11.3 0.0 2.5 2 0 0 2 2 2 2 Sel1 repeat MORN PF02493.20 NODE_51009_length_357_cov_78.052795_g43101_i0reverse_frame_2 - 7.3e-06 25.6 11.8 0.00015 21.5 2.4 4.3 4 0 0 4 4 4 2 MORN repeat RTA1 PF04479.13 NODE_51006_length_357_cov_85.757764_g43098_i0reverse_frame_3 - 0.043 13.4 6.5 0.049 13.2 6.5 1.1 1 0 0 1 1 1 0 RTA1 like protein Rav1p_C PF12234.8 NODE_51006_length_357_cov_85.757764_g43098_i0reverse_frame_2 - 0.0082 14.6 1.4 0.0088 14.5 1.4 1.0 1 0 0 1 1 1 1 RAVE protein 1 C terminal Raco_middle PF17651.1 NODE_51001_length_357_cov_101.913043_g43093_i0reverse_frame_2 - 0.033 13.9 0.2 0.044 13.5 0.2 1.2 1 0 0 1 1 1 0 RACo middle region G-gamma PF00631.22 NODE_51001_length_357_cov_101.913043_g43093_i0reverse_frame_2 - 0.72 9.9 5.9 4.6 7.3 0.4 2.9 2 1 1 3 3 3 0 GGL domain UNC-50 PF05216.13 NODE_50996_length_357_cov_124.077640_g43088_i0forward_frame_3 - 0.044 13.3 1.6 0.056 13.0 1.6 1.3 1 1 0 1 1 1 0 UNC-50 family TFIID-31kDa PF02291.15 NODE_50995_length_357_cov_135.788820_g43087_i0reverse_frame_3 - 0.035 14.2 0.0 0.042 13.9 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Histone PF00125.24 NODE_50995_length_357_cov_135.788820_g43087_i0reverse_frame_3 - 0.13 12.6 0.3 0.8 10.1 0.3 1.9 1 1 0 1 1 1 0 Core histone H2A/H2B/H3/H4 KASH PF10541.9 NODE_50993_length_357_cov_186.701863_g43085_i0forward_frame_2 - 0.016 15.5 0.1 0.046 14.0 0.1 1.7 2 0 0 2 2 2 0 Nuclear envelope localisation domain UreE_C PF05194.12 NODE_50992_length_357_cov_204.854037_g43084_i0forward_frame_3 - 0.016 15.6 0.2 0.021 15.3 0.2 1.2 1 0 0 1 1 1 0 UreE urease accessory protein, C-terminal domain YqgC PF17430.2 NODE_50992_length_357_cov_204.854037_g43084_i0forward_frame_2 - 0.034 14.2 1.1 0.062 13.4 1.1 1.5 1 0 0 1 1 1 0 Uncharacterized YqgC-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks223.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks223.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks223.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks223.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CitMHS PF03600.16 NODE_50991_length_357_cov_302.928571_g43083_i0forward_frame_2 - 0.13 11.4 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Citrate transporter zf-C2H2_9 PF16293.5 NODE_50990_length_357_cov_448.596273_g43082_i0reverse_frame_2 - 0.15 12.0 0.5 0.22 11.4 0.5 1.3 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) ABC2_membrane_3 PF12698.7 NODE_50989_length_357_cov_1020.142857_g43081_i0forward_frame_2 - 0.35 9.9 0.0 0.38 9.8 0.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Imm17 PF15562.6 NODE_50985_length_357_cov_9370.363354_g43078_i0forward_frame_2 - 0.079 12.8 0.1 0.079 12.8 0.1 1.6 2 0 0 2 2 2 0 Immunity protein 17 CSD PF00313.22 ORF99107 - 1.4e-06 28.0 0.0 3.4e-06 26.8 0.0 1.5 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF99107 - 0.0016 18.1 0.1 0.003 17.2 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF2382 PF09557.10 ORF97710 - 0.087 13.1 2.0 1.2 9.4 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2382) DUF1815 PF08844.10 ORF96653 - 0.12 12.4 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) DUF4355 PF14265.6 ORF95464 - 0.37 11.0 16.8 0.54 10.5 16.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4355) CemA PF03040.14 ORF95464 - 3.1 7.7 6.8 4 7.3 6.8 1.2 1 0 0 1 1 1 0 CemA family TMA7 PF09072.10 ORF95464 - 3.9 8.4 7.3 2 9.3 4.4 2.0 1 1 1 2 2 2 0 Translation machinery associated TMA7 AAA_23 PF13476.6 ORF95464 - 6.5 7.2 15.8 8.4 6.8 15.8 1.1 1 0 0 1 1 1 0 AAA domain TNFR_16_TM PF18422.1 ORF94825 - 0.041 13.8 0.2 0.081 12.9 0.2 1.5 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain AOX PF01786.17 ORF94174 - 1 8.9 4.0 1.5 8.3 4.0 1.2 1 0 0 1 1 1 0 Alternative oxidase zinc_ribbon_15 PF17032.5 ORF93765 - 0.67 10.7 3.9 1.3 9.9 3.9 1.4 1 1 0 1 1 1 0 zinc-ribbon family Toxin_33 PF08121.11 ORF93089 - 0.11 12.3 0.5 0.29 11.0 0.5 1.6 1 0 0 1 1 1 0 Waglerin family Glyco_transf_7C PF02709.14 ORF92959 - 0.0022 17.6 0.3 0.0039 16.8 0.3 1.4 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase SDA1 PF05285.12 ORF92821 - 0.051 13.0 27.4 0.052 13.0 27.4 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF92821 - 0.63 8.2 27.2 0.64 8.2 27.2 1.0 1 0 0 1 1 1 0 Nop14-like family NOA36 PF06524.12 ORF92821 - 0.69 9.2 25.6 0.89 8.8 25.6 1.2 1 0 0 1 1 1 0 NOA36 protein PTPRCAP PF15713.5 ORF92821 - 0.69 10.2 16.8 0.71 10.1 15.2 1.9 2 0 0 2 2 2 0 Protein tyrosine phosphatase receptor type C-associated RNA_pol_Rpc4 PF05132.14 ORF92821 - 0.72 10.3 5.1 0.78 10.2 5.1 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF913 PF06025.12 ORF92821 - 1.4 7.8 6.3 1.3 7.9 6.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) PPP4R2 PF09184.11 ORF92821 - 2.5 7.6 22.2 2.6 7.6 22.2 1.2 1 0 0 1 1 1 0 PPP4R2 V_ATPase_I PF01496.19 ORF92821 - 2.8 5.7 8.8 3 5.7 8.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CDC45 PF02724.14 ORF92821 - 3 6.0 22.6 3.3 5.9 22.6 1.1 1 0 0 1 1 1 0 CDC45-like protein Zip PF02535.22 ORF92821 - 3.1 6.9 5.9 3.1 6.9 5.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter NPR3 PF03666.13 ORF92821 - 4 6.1 13.7 4.8 5.9 13.7 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Afi1 PF07792.12 ORF92821 - 4 7.9 16.2 6 7.3 16.2 1.3 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking Connexin PF00029.19 ORF92821 - 5.5 6.7 4.7 5.7 6.6 4.7 1.2 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 ORF92821 - 7.1 5.3 8.2 6.6 5.4 8.2 1.1 1 0 0 1 1 1 0 Presenilin LPD15 PF18828.1 ORF92677 - 0.045 13.6 0.4 0.083 12.8 0.3 1.6 1 1 0 1 1 1 0 Large polyvalent-protein-associated domain 15 Pkinase PF00069.25 ORF92391 - 1.4e-31 109.8 0.1 1.5e-31 109.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92391 - 4.9e-17 62.1 0.0 6.1e-17 61.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF92391 - 3.3e-06 26.6 0.0 2e-05 24.1 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF92391 - 0.0028 17.1 0.1 0.0034 16.8 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF92391 - 0.063 12.1 0.0 0.071 11.9 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase zf-Mss51 PF13824.6 ORF92391 - 0.064 13.4 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 FTA2 PF13095.6 ORF92391 - 0.082 12.5 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF92391 - 0.19 11.6 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family YWFCY PF14293.6 ORF92104 - 0.15 12.3 0.4 0.32 11.3 0.4 1.5 1 0 0 1 1 1 0 YWFCY protein ApoO PF09769.9 ORF91606 - 0.053 13.5 4.2 0.077 13.0 4.2 1.5 1 1 0 1 1 1 0 Apolipoprotein O Neur_chan_memb PF02932.16 ORF91606 - 0.097 12.7 10.0 0.11 12.5 10.0 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF4778 PF16008.5 ORF91606 - 0.11 12.6 7.7 0.12 12.4 7.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) DUF778 PF05608.12 ORF91606 - 0.23 11.8 6.4 0.27 11.6 6.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF778) GET2 PF08690.10 ORF91606 - 0.38 10.4 12.1 0.46 10.1 12.1 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 O-antigen_lig PF13425.6 ORF91606 - 1.3 7.7 5.0 1.5 7.5 5.0 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein RR_TM4-6 PF06459.12 ORF91606 - 2.3 8.0 11.3 2.4 7.9 11.3 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF1980 PF09323.10 ORF91606 - 5.2 6.9 7.5 6.3 6.7 7.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Serinc PF03348.15 ORF91606 - 6.6 5.5 5.0 6.6 5.5 5.0 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) Presenilin PF01080.17 ORF91606 - 8.9 5.0 12.8 9.8 4.8 12.8 1.0 1 0 0 1 1 1 0 Presenilin Coilin_N PF15862.5 ORF91606 - 9.3 6.1 12.6 13 5.6 12.6 1.3 1 0 0 1 1 1 0 Coilin N-terminus zf-tcix PF14952.6 ORF90879 - 0.015 14.9 2.6 0.14 11.8 0.1 2.7 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding RecR PF02132.15 ORF90879 - 0.029 13.9 0.8 0.11 12.1 0.0 2.2 2 0 0 2 2 2 0 RecR protein DUF4337 PF14235.6 ORF90729 - 0.024 14.8 1.7 0.034 14.3 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) TusA PF01206.17 ORF88887 - 0.091 12.6 0.1 1.2 9.0 0.0 2.1 2 0 0 2 2 2 0 Sulfurtransferase TusA Endonuc_Holl PF10107.9 ORF88887 - 1 9.2 5.6 0.66 9.8 3.7 1.6 1 1 0 1 1 1 0 Endonuclease related to archaeal Holliday junction resolvase UBA PF00627.31 ORF88852 - 0.086 12.8 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 UBA/TS-N domain 3HCDH_N PF02737.18 ORF88745 - 0.22 11.4 1.8 0.25 11.2 1.8 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TTL PF03133.15 ORF87612 - 1.3e-13 50.8 0.0 1.4e-13 50.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Beta-lactamase2 PF13354.6 ORF87612 - 0.043 13.4 0.0 0.043 13.4 0.0 1.0 1 0 0 1 1 1 0 Beta-lactamase enzyme family NusA_N PF08529.11 ORF87612 - 0.078 13.3 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 NusA N-terminal domain Ribosomal_L11 PF00298.19 ORF87015 - 5.2e-09 36.5 0.3 7.6e-09 36.0 0.0 1.5 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain TMP_2 PF06791.13 ORF87015 - 0.12 12.1 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Prophage tail length tape measure protein CBM_1 PF00734.18 ORF86516 - 0.14 12.2 1.9 2.6 8.1 0.1 2.6 2 0 0 2 2 2 0 Fungal cellulose binding domain MMgT PF10270.9 ORF86198 - 2.6e-10 40.5 0.0 2.8e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Membrane magnesium transporter Peripla_BP_1 PF00532.21 ORF86157 - 2.8e-29 102.4 0.0 3.1e-29 102.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Rab5ip PF07019.12 ORF85318 - 6.6e-17 61.9 8.6 8.1e-17 61.6 8.6 1.1 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) zf-Paramyx-P PF13008.7 ORF84456 - 0.5 9.9 7.5 0.64 9.5 4.4 2.3 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein HATPase_c_4 PF13749.6 ORF84405 - 0.063 13.4 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Putative ATP-dependent DNA helicase recG C-terminal GGACT PF06094.12 ORF84205 - 2.6e-08 34.5 0.0 3e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 ORF84205 - 0.018 15.4 0.0 0.028 14.8 0.0 1.3 1 0 0 1 1 1 0 AIG2-like family PhyH PF05721.13 ORF82248 - 0.019 15.2 0.0 0.032 14.5 0.0 1.3 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) UCR_hinge PF02320.16 ORF82246 - 3.3e-17 62.4 3.0 5.3e-17 61.8 3.0 1.3 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein CHCH PF06747.13 ORF82246 - 0.67 10.2 7.2 4.9 7.4 0.2 2.9 3 0 0 3 3 3 0 CHCH domain PGPGW PF09656.10 ORF81626 - 9.3 5.9 11.1 9.5 5.8 0.6 3.1 3 0 0 3 3 3 0 Putative transmembrane protein (PGPGW) UL17 PF17640.2 ORF80973 - 0.074 13.1 3.8 0.096 12.7 3.7 1.3 1 1 0 1 1 1 0 Uncharacterized UL17 DUF2722 PF10846.8 ORF79799 - 0.013 14.5 3.5 0.015 14.3 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) SDA1 PF05285.12 ORF78547 - 0.025 14.0 25.9 0.029 13.8 25.9 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF78547 - 0.39 8.9 26.0 0.4 8.8 26.0 1.0 1 0 0 1 1 1 0 Nop14-like family PTPRCAP PF15713.5 ORF78547 - 0.46 10.8 15.7 0.48 10.7 14.1 1.9 2 0 0 2 2 2 0 Protein tyrosine phosphatase receptor type C-associated RNA_pol_Rpc4 PF05132.14 ORF78547 - 0.6 10.5 4.6 0.72 10.3 4.6 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 NOA36 PF06524.12 ORF78547 - 0.78 9.0 25.7 0.97 8.7 25.7 1.2 1 0 0 1 1 1 0 NOA36 protein DUF913 PF06025.12 ORF78547 - 0.83 8.6 5.3 0.86 8.5 5.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) V_ATPase_I PF01496.19 ORF78547 - 1.3 6.8 7.9 1.4 6.8 7.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NPR3 PF03666.13 ORF78547 - 1.7 7.3 12.4 2.1 7.1 12.4 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CDC45 PF02724.14 ORF78547 - 1.8 6.8 21.3 1.9 6.7 21.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Afi1 PF07792.12 ORF78547 - 1.9 9.0 15.3 2.8 8.4 15.3 1.2 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking PPP4R2 PF09184.11 ORF78547 - 2.1 7.9 21.7 2.3 7.8 21.7 1.1 1 0 0 1 1 1 0 PPP4R2 Connexin PF00029.19 ORF78547 - 3.3 7.4 3.8 3.8 7.2 3.8 1.2 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 ORF78547 - 3.4 6.3 6.9 3.1 6.5 6.9 1.1 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 ORF78547 - 3.9 6.6 5.8 3.8 6.7 5.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter CitMHS PF03600.16 ORF78252 - 6.2 5.9 11.2 7.3 5.7 11.2 1.1 1 0 0 1 1 1 0 Citrate transporter DUF1799 PF08809.11 ORF78137 - 0.014 15.5 0.0 0.023 14.9 0.0 1.3 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) Spc7 PF08317.11 ORF77716 - 0.00032 19.7 10.0 0.00034 19.6 10.0 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF77716 - 0.00047 20.4 8.6 0.00053 20.2 8.6 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 FliD_C PF07195.12 ORF77716 - 0.0006 19.3 4.1 0.005 16.3 0.7 2.0 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus YbfN PF13982.6 ORF77716 - 0.001 19.3 0.6 0.0031 17.8 0.1 1.9 1 1 1 2 2 2 1 YbfN-like lipoprotein BRE1 PF08647.11 ORF77716 - 0.0015 18.6 5.5 0.0015 18.6 5.5 1.8 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase LCD1 PF09798.9 ORF77716 - 0.0023 16.5 8.8 0.0028 16.2 8.8 1.0 1 0 0 1 1 1 1 DNA damage checkpoint protein DUF773 PF05600.12 ORF77716 - 0.0056 15.5 5.4 0.0063 15.3 5.4 1.0 1 0 0 1 1 1 1 CDK5 regulatory subunit-associated protein 3 DUF4164 PF13747.6 ORF77716 - 0.011 16.0 1.6 0.014 15.6 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) DUF4200 PF13863.6 ORF77716 - 0.02 15.3 6.4 0.02 15.3 6.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Bacillus_HBL PF05791.11 ORF77716 - 0.02 14.8 7.1 0.029 14.2 7.1 1.4 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) OmpH PF03938.14 ORF77716 - 0.026 14.8 6.0 0.032 14.6 6.0 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF3450 PF11932.8 ORF77716 - 0.034 13.4 5.6 0.04 13.2 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ADIP PF11559.8 ORF77716 - 0.036 14.1 10.7 0.48 10.5 10.7 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding FlaC_arch PF05377.11 ORF77716 - 0.052 13.9 1.2 0.052 13.9 1.2 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF643 PF04867.12 ORF77716 - 0.057 14.0 3.7 0.095 13.3 3.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF643) DUF1974 PF09317.11 ORF77716 - 0.09 12.3 2.2 0.11 12.1 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) LCIB_C_CA PF18599.1 ORF77716 - 0.14 11.4 1.7 0.17 11.2 1.7 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases ABC_tran_CTD PF16326.5 ORF77716 - 0.18 12.0 9.6 0.12 12.6 6.7 2.0 1 1 2 3 3 3 0 ABC transporter C-terminal domain YabA PF06156.13 ORF77716 - 0.24 12.0 5.4 0.39 11.4 5.4 1.4 1 1 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF77716 - 0.33 8.8 6.1 0.33 8.8 6.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family APG6_N PF17675.1 ORF77716 - 0.44 11.1 11.6 1.6 9.3 11.6 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region TMPIT PF07851.13 ORF77716 - 0.7 9.1 5.9 0.81 8.9 5.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein BST2 PF16716.5 ORF77716 - 0.92 10.1 8.8 0.1 13.2 2.9 2.0 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Lyase_aromatic PF00221.19 ORF75654 - 0.025 13.3 0.0 0.025 13.3 0.0 1.0 1 0 0 1 1 1 0 Aromatic amino acid lyase EXS PF03124.14 ORF74394 - 3.1e-15 56.3 3.8 3.6e-15 56.1 3.8 1.1 1 0 0 1 1 1 1 EXS family Cyclin PF08613.11 ORF74251 - 1e-08 35.7 0.9 1.2e-08 35.5 0.9 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF74251 - 1.1e-05 25.1 0.2 1.4e-05 24.9 0.2 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain AAA_33 PF13671.6 ORF74198 - 1.6e-06 28.3 0.0 1.8e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain MCPVI PF02993.14 ORF73383 - 0.59 9.9 4.9 0.75 9.6 4.9 1.2 1 0 0 1 1 1 0 Minor capsid protein VI Pex24p PF06398.11 ORF73318 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Tad PF13400.6 ORF72772 - 7.1 7.0 8.2 0.52 10.7 1.3 2.1 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like V-ATPase_G PF03179.15 ORF72293 - 1.1e-23 83.7 14.8 1.3e-23 83.5 14.8 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit LAX PF15681.5 ORF72293 - 0.016 14.1 0.4 0.016 14.0 0.4 1.1 1 0 0 1 1 1 0 Lymphocyte activation family X ATP-synt_B PF00430.18 ORF72293 - 0.19 11.8 16.1 0.17 12.0 10.7 2.0 1 1 0 2 2 2 0 ATP synthase B/B' CF(0) Aldedh PF00171.22 ORF72293 - 0.24 9.9 2.0 0.27 9.7 2.0 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family DUF2344 PF10105.9 ORF72293 - 0.26 11.1 3.3 0.29 10.9 3.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) Pes-10 PF07149.11 ORF72293 - 0.37 9.8 10.9 0.42 9.6 10.9 1.1 1 0 0 1 1 1 0 Pes-10 DUF3552 PF12072.8 ORF72293 - 0.67 9.3 18.0 3.1 7.2 18.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF932 PF06067.11 ORF72293 - 0.84 9.4 4.0 1 9.1 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF932) FAM60A PF15396.6 ORF72293 - 2.7 7.9 6.3 3.3 7.7 6.3 1.0 1 0 0 1 1 1 0 Protein Family FAM60A UPF0242 PF06785.11 ORF72293 - 9.7 6.2 13.1 10 6.1 13.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3446 PF11928.8 ORF7137 - 3.9 7.8 10.1 2.6 8.4 8.9 1.5 1 1 0 1 1 1 0 Early growth response N-terminal domain Ribosomal_L37 PF08561.10 ORF70754 - 0.19 12.3 0.1 0.26 11.8 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L37 Actin PF00022.19 ORF70700 - 2.7 6.5 8.0 2.6 6.5 8.0 1.2 1 0 0 1 1 1 0 Actin FHIPEP PF00771.20 ORF70700 - 4.7 5.6 11.6 5.1 5.4 11.6 1.0 1 0 0 1 1 1 0 FHIPEP family DUF1644 PF07800.12 ORF70700 - 8.4 6.4 10.4 12 6.0 10.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) Sugar_tr PF00083.24 ORF6929 - 1.5e-10 40.6 10.5 1.5e-10 40.6 10.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter XPC-binding PF09280.11 ORF69059 - 0.026 14.2 1.5 0.052 13.3 1.5 1.4 1 0 0 1 1 1 0 XPC-binding domain zf-Tim10_DDP PF02953.15 ORF68901 - 0.059 13.0 0.4 0.83 9.4 0.1 2.3 2 0 0 2 2 2 0 Tim10/DDP family zinc finger Pex24p PF06398.11 ORF67999 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Pex24p PF06398.11 ORF67673 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2138 PF09909.9 ORF67644 - 0.06 11.7 1.3 0.066 11.5 1.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2138) EF-hand_1 PF00036.32 ORF67537 - 0.00018 20.8 0.4 0.002 17.6 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF67537 - 0.00066 19.4 0.1 0.0037 17.1 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF67537 - 0.0038 16.7 0.7 0.011 15.2 0.2 2.0 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF67537 - 0.0075 16.7 0.1 0.016 15.7 0.1 1.6 1 1 0 1 1 1 1 EF-hand domain pair SMG1_N PF17229.2 ORF67537 - 0.13 12.9 0.2 0.19 12.4 0.2 1.3 1 0 0 1 1 1 0 Serine/threonine-protein kinase SMG1 N-terminal Snapin_Pallidin PF14712.6 ORF67345 - 0.046 14.1 9.5 0.55 10.7 1.3 3.0 1 1 2 3 3 3 0 Snapin/Pallidin Phage_int_SAM_2 PF12834.7 ORF67345 - 0.046 14.4 0.8 0.059 14.1 0.8 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal Rab_eff_C PF04698.12 ORF66362 - 0.51 8.6 3.0 0.56 8.4 3.0 1.0 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus Toxin_2 PF00451.19 ORF66214 - 7.4 7.0 8.0 2.3 8.6 0.2 2.6 3 0 0 3 3 3 0 Scorpion short toxin, BmKK2 HTH_15 PF12324.8 ORF6513 - 0.043 13.8 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase DSHCT PF08148.12 ORF6513 - 0.044 13.5 0.0 0.051 13.2 0.0 1.1 1 0 0 1 1 1 0 DSHCT (NUC185) domain PfUIS3 PF11567.8 ORF6513 - 0.07 13.5 0.0 0.091 13.1 0.0 1.2 1 0 0 1 1 1 0 Plasmodium falciparum UIS3 membrane protein V-ATPase_H_N PF03224.14 ORF6513 - 0.088 12.1 0.2 0.1 11.8 0.2 1.1 1 0 0 1 1 1 0 V-ATPase subunit H GFA PF04828.14 ORF65054 - 0.021 15.2 2.4 0.031 14.6 2.4 1.4 1 1 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme EF-hand_7 PF13499.6 ORF64792 - 1.6e-13 50.9 10.0 3.1e-10 40.3 3.7 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF64792 - 2e-12 45.7 5.8 5.2e-06 25.6 0.3 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF64792 - 1.3e-10 40.3 7.2 1.5e-05 24.5 1.4 3.4 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF64792 - 3.5e-08 32.6 5.3 0.00097 18.5 0.3 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF64792 - 3.7e-06 26.7 7.0 0.00026 20.8 0.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF64792 - 9.5e-05 22.7 1.0 0.0083 16.4 0.6 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region LXG PF04740.12 ORF64792 - 0.0014 18.3 0.5 0.0022 17.8 0.5 1.3 1 0 0 1 1 1 1 LXG domain of WXG superfamily NitrOD5 PF11537.8 ORF64792 - 0.007 16.5 1.0 0.024 14.8 0.3 2.1 1 1 1 2 2 2 1 Nitrosopumilus output domain 5 EF-hand_10 PF14788.6 ORF64792 - 0.016 15.1 3.8 0.84 9.5 0.4 2.5 2 1 0 2 2 2 0 EF hand p25-alpha PF05517.12 ORF64792 - 0.034 14.3 1.6 0.073 13.2 0.7 1.9 1 1 1 2 2 2 0 p25-alpha Glycos_trans_3N PF02885.17 ORF64792 - 0.037 13.9 0.2 4.1 7.3 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain HTH_57 PF18679.1 ORF64792 - 0.17 12.2 0.6 1.9 8.8 0.1 2.0 1 1 1 2 2 2 0 ThcOx helix turn helix domain Polysacc_syn_2C PF08485.10 ORF64792 - 0.46 10.2 3.7 8.9 6.1 0.1 2.8 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal Med22 PF06179.12 ORF64291 - 4.2e-05 23.7 2.0 7.1e-05 23.0 2.0 1.5 1 1 0 1 1 1 1 Surfeit locus protein 5 subunit 22 of Mediator complex APG6_N PF17675.1 ORF64291 - 0.044 14.3 2.6 0.084 13.4 2.6 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region CK2S PF15011.6 ORF64291 - 0.045 13.7 2.1 0.063 13.2 1.2 1.7 1 1 1 2 2 2 0 Casein Kinase 2 substrate Snapin_Pallidin PF14712.6 ORF63638 - 0.025 15.0 8.2 0.43 11.0 0.5 2.8 1 1 1 2 2 2 0 Snapin/Pallidin Phage_int_SAM_2 PF12834.7 ORF63638 - 0.05 14.3 1.0 0.064 14.0 1.0 1.2 1 0 0 1 1 1 0 Phage integrase, N-terminal DUF2614 PF11023.8 ORF6333 - 0.041 14.0 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain Metallophos_C PF14008.6 ORF6333 - 0.11 13.3 0.0 0.17 12.8 0.0 1.3 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C DUF4773 PF15998.5 ORF62522 - 0.2 12.2 5.8 0.27 11.8 5.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4773) Glyco_transf_88 PF16849.5 ORF61055 - 0.13 11.1 0.0 0.15 11.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 88 SUI1 PF01253.22 ORF60920 - 1.5e-20 73.5 0.3 2.7e-20 72.7 0.1 1.5 1 1 1 2 2 2 1 Translation initiation factor SUI1 Img2 PF05046.14 ORF60920 - 0.0059 16.9 0.1 0.0077 16.5 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) AnfG_VnfG PF03139.15 ORF60920 - 0.052 13.6 0.2 0.066 13.3 0.2 1.3 1 0 0 1 1 1 0 Vanadium/alternative nitrogenase delta subunit Macro PF01661.21 ORF6027 - 0.037 14.1 0.0 0.051 13.6 0.0 1.3 1 0 0 1 1 1 0 Macro domain SLY PF12485.8 ORF58491 - 0.43 11.3 5.5 0.62 10.8 5.5 1.2 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein FTR1 PF03239.14 ORF57845 - 0.0027 17.0 0.1 0.0031 16.7 0.1 1.1 1 0 0 1 1 1 1 Iron permease FTR1 family MFS_1 PF07690.16 ORF57845 - 0.2 10.5 10.1 0.66 8.8 10.1 1.6 1 1 0 1 1 1 0 Major Facilitator Superfamily Pex24p PF06398.11 ORF57209 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin CN_hydrolase PF00795.22 ORF56373 - 0.14 11.4 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Carbon-nitrogen hydrolase MMgT PF10270.9 ORF56268 - 2.6e-10 40.5 0.0 2.8e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Membrane magnesium transporter NOB1_Zn_bind PF08772.11 ORF56245 - 0.13 12.5 1.3 0.25 11.5 1.3 1.5 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DZR PF12773.7 ORF56245 - 0.28 11.2 4.8 0.7 10.0 4.8 1.7 1 1 0 1 1 1 0 Double zinc ribbon DUF2475 PF10629.9 ORF56118 - 0.0032 17.6 0.0 0.0052 17.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2475) LodA_C PF18417.1 ORF56118 - 0.15 11.8 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 L-lysine epsilon oxidase C-terminal domain Spc7 PF08317.11 ORF55285 - 0.00032 19.7 10.0 0.00034 19.6 10.0 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF55285 - 0.00047 20.4 8.6 0.00053 20.2 8.6 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 FliD_C PF07195.12 ORF55285 - 0.0006 19.3 4.1 0.005 16.3 0.7 2.0 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus YbfN PF13982.6 ORF55285 - 0.001 19.3 0.6 0.0031 17.8 0.1 1.9 1 1 1 2 2 2 1 YbfN-like lipoprotein BRE1 PF08647.11 ORF55285 - 0.0015 18.6 5.5 0.0015 18.6 5.5 1.8 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase LCD1 PF09798.9 ORF55285 - 0.0023 16.5 8.8 0.0028 16.2 8.8 1.0 1 0 0 1 1 1 1 DNA damage checkpoint protein DUF773 PF05600.12 ORF55285 - 0.0056 15.5 5.4 0.0063 15.3 5.4 1.0 1 0 0 1 1 1 1 CDK5 regulatory subunit-associated protein 3 DUF4164 PF13747.6 ORF55285 - 0.011 16.0 1.6 0.014 15.6 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) DUF4200 PF13863.6 ORF55285 - 0.02 15.3 6.4 0.02 15.3 6.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Bacillus_HBL PF05791.11 ORF55285 - 0.02 14.8 7.1 0.029 14.2 7.1 1.4 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) OmpH PF03938.14 ORF55285 - 0.026 14.8 6.0 0.032 14.6 6.0 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF3450 PF11932.8 ORF55285 - 0.034 13.4 5.6 0.04 13.2 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ADIP PF11559.8 ORF55285 - 0.036 14.1 10.7 0.48 10.5 10.7 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding FlaC_arch PF05377.11 ORF55285 - 0.052 13.9 1.2 0.052 13.9 1.2 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF643 PF04867.12 ORF55285 - 0.057 14.0 3.7 0.095 13.3 3.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF643) DUF1974 PF09317.11 ORF55285 - 0.09 12.3 2.2 0.11 12.1 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) LCIB_C_CA PF18599.1 ORF55285 - 0.14 11.4 1.7 0.17 11.2 1.7 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases ABC_tran_CTD PF16326.5 ORF55285 - 0.18 12.0 9.6 0.12 12.6 6.7 2.0 1 1 2 3 3 3 0 ABC transporter C-terminal domain YabA PF06156.13 ORF55285 - 0.24 12.0 5.4 0.39 11.4 5.4 1.4 1 1 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF55285 - 0.33 8.8 6.1 0.33 8.8 6.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family APG6_N PF17675.1 ORF55285 - 0.44 11.1 11.6 1.6 9.3 11.6 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region TMPIT PF07851.13 ORF55285 - 0.7 9.1 5.9 0.81 8.9 5.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein BST2 PF16716.5 ORF55285 - 0.92 10.1 8.8 0.1 13.2 2.9 2.0 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 NRBF2 PF08961.10 ORF53318 - 0.0096 15.5 0.4 0.0098 15.5 0.4 1.2 1 0 0 1 1 1 1 Nuclear receptor-binding factor 2, autophagy regulator HAUS6_N PF14661.6 ORF53318 - 0.039 13.5 0.8 0.041 13.5 0.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Synaptobrevin PF00957.21 ORF53318 - 0.085 12.7 2.5 0.13 12.1 0.7 2.0 1 1 1 2 2 2 0 Synaptobrevin PDCD2_C PF04194.13 ORF5276 - 0.36 10.9 7.0 0.44 10.6 7.0 1.1 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain CitMHS PF03600.16 ORF52307 - 6.2 5.9 11.2 7.3 5.7 11.2 1.1 1 0 0 1 1 1 0 Citrate transporter Evr1_Alr PF04777.13 ORF52174 - 3.2e-14 53.2 1.6 4.5e-14 52.7 1.6 1.2 1 0 0 1 1 1 1 Erv1 / Alr family cIII PF08134.11 ORF52174 - 0.2 11.5 0.2 0.45 10.3 0.2 1.6 1 0 0 1 1 1 0 cIII protein family Trehalase_Ca-bi PF07492.11 ORF52040 - 0.068 12.9 0.1 0.16 11.8 0.1 1.6 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain Myb_Cef PF11831.8 ORF50323 - 0.013 15.1 0.4 0.015 14.9 0.4 1.1 1 0 0 1 1 1 0 pre-mRNA splicing factor component MMgT PF10270.9 ORF49198 - 2.6e-10 40.5 0.0 2.8e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Membrane magnesium transporter SprA-related PF12118.8 ORF47196 - 0.047 12.8 11.6 0.056 12.6 11.6 1.1 1 0 0 1 1 1 0 SprA-related family RRN3 PF05327.11 ORF47196 - 0.16 10.5 6.6 0.15 10.5 6.6 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 DNA_pol_phi PF04931.13 ORF47196 - 0.53 8.3 15.2 0.66 8.0 15.2 1.0 1 0 0 1 1 1 0 DNA polymerase phi Mem_trans PF03547.18 ORF47196 - 0.55 8.6 3.2 0.65 8.3 3.2 1.0 1 0 0 1 1 1 0 Membrane transport protein CDC45 PF02724.14 ORF47196 - 2.9 6.1 16.5 3.1 6.0 16.5 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4407 PF14362.6 ORF47196 - 6.1 6.1 10.0 7.5 5.8 10.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Vfa1 PF08432.10 ORF47196 - 7 6.9 15.5 8 6.8 15.5 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 BTV_NS2 PF04514.12 ORF47196 - 9.9 4.9 11.4 4.4 6.0 9.6 1.3 1 1 0 1 1 1 0 Bluetongue virus non-structural protein NS2 zf-LITAF-like PF10601.9 ORF47041 - 7.4e-13 48.6 21.4 9.4e-13 48.2 21.4 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF3239 PF11580.8 ORF47041 - 0.027 14.8 0.4 0.034 14.5 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3239) ArenaCapSnatch PF17296.2 ORF47041 - 0.14 11.6 0.6 0.17 11.3 0.6 1.1 1 0 0 1 1 1 0 Arenavirus cap snatching domain Aldo_ket_red PF00248.21 ORF46759 - 6.2e-08 32.2 0.0 7.6e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Ins_beta PF03488.14 ORF46663 - 0.0053 16.7 2.0 0.15 12.1 0.5 2.3 2 0 0 2 2 2 2 Nematode insulin-related peptide beta type EF-hand_7 PF13499.6 ORF46392 - 1.6e-13 50.9 10.0 3.1e-10 40.3 3.7 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF46392 - 2e-12 45.7 5.8 5.2e-06 25.6 0.3 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF46392 - 1.3e-10 40.3 7.2 1.5e-05 24.5 1.4 3.4 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF46392 - 3.5e-08 32.6 5.3 0.00097 18.5 0.3 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF46392 - 3.7e-06 26.7 7.0 0.00026 20.8 0.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF46392 - 9.5e-05 22.7 1.0 0.0083 16.4 0.6 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region LXG PF04740.12 ORF46392 - 0.0014 18.3 0.5 0.0022 17.8 0.5 1.3 1 0 0 1 1 1 1 LXG domain of WXG superfamily NitrOD5 PF11537.8 ORF46392 - 0.007 16.5 1.0 0.024 14.8 0.3 2.1 1 1 1 2 2 2 1 Nitrosopumilus output domain 5 EF-hand_10 PF14788.6 ORF46392 - 0.016 15.1 3.8 0.84 9.5 0.4 2.5 2 1 0 2 2 2 0 EF hand p25-alpha PF05517.12 ORF46392 - 0.034 14.3 1.6 0.073 13.2 0.7 1.9 1 1 1 2 2 2 0 p25-alpha Glycos_trans_3N PF02885.17 ORF46392 - 0.037 13.9 0.2 4.1 7.3 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain HTH_57 PF18679.1 ORF46392 - 0.17 12.2 0.6 1.9 8.8 0.1 2.0 1 1 1 2 2 2 0 ThcOx helix turn helix domain Polysacc_syn_2C PF08485.10 ORF46392 - 0.46 10.2 3.7 8.9 6.1 0.1 2.8 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal FKBP26_C PF18046.1 ORF46389 - 0.079 13.1 0.1 0.16 12.1 0.1 1.6 1 1 0 1 1 1 0 FKBP26_C-terminal CD24 PF14984.6 ORF4617 - 0.73 10.1 4.6 1.5 9.1 4.6 1.6 1 0 0 1 1 1 0 CD24 protein Pex24p PF06398.11 ORF46133 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin UPF0731 PF14982.6 ORF43341 - 0.061 13.5 1.6 0.067 13.4 0.1 1.8 2 0 0 2 2 2 0 UPF0731 family HTH_15 PF12324.8 ORF42269 - 0.043 13.8 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase DSHCT PF08148.12 ORF42269 - 0.044 13.5 0.0 0.051 13.2 0.0 1.1 1 0 0 1 1 1 0 DSHCT (NUC185) domain PfUIS3 PF11567.8 ORF42269 - 0.07 13.5 0.0 0.091 13.1 0.0 1.2 1 0 0 1 1 1 0 Plasmodium falciparum UIS3 membrane protein V-ATPase_H_N PF03224.14 ORF42269 - 0.088 12.1 0.2 0.1 11.8 0.2 1.1 1 0 0 1 1 1 0 V-ATPase subunit H UBA PF00627.31 ORF41517 - 0.086 12.8 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 UBA/TS-N domain PDZ PF00595.24 ORF40777 - 0.04 14.3 0.0 0.061 13.7 0.0 1.3 1 1 0 1 1 1 0 PDZ domain DUF805 PF05656.14 ORF4018 - 4.1e-33 113.9 2.3 4.7e-33 113.7 2.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF805) YwiC PF14256.6 ORF4018 - 1.3 9.3 8.8 0.28 11.5 1.2 2.1 1 1 1 2 2 2 0 YwiC-like protein MMgT PF10270.9 ORF40096 - 2.6e-10 40.5 0.0 2.8e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Membrane magnesium transporter Rab5ip PF07019.12 ORF38555 - 6.3e-17 62.0 8.6 8.1e-17 61.6 8.6 1.2 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) ArsP_1 PF03773.13 ORF37978 - 0.04 13.1 0.0 0.053 12.7 0.0 1.1 1 0 0 1 1 1 0 Predicted permease DUF3232 PF11554.8 ORF37530 - 0.0049 17.3 0.3 0.0061 16.9 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3232) PYRIN PF02758.16 ORF37530 - 0.038 14.1 0.4 0.064 13.4 0.4 1.3 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain CheF-arch PF04283.12 ORF37530 - 0.046 13.5 0.0 0.047 13.4 0.0 1.1 1 0 0 1 1 1 0 Chemotaxis signal transduction system protein F from archaea Lyase_aromatic PF00221.19 ORF35858 - 0.025 13.3 0.0 0.025 13.3 0.0 1.0 1 0 0 1 1 1 0 Aromatic amino acid lyase AOX PF01786.17 ORF35578 - 1 8.9 4.0 1.5 8.3 4.0 1.2 1 0 0 1 1 1 0 Alternative oxidase DGOK PF05035.12 ORF35011 - 0.046 12.6 0.0 0.054 12.4 0.0 1.1 1 0 0 1 1 1 0 2-keto-3-deoxy-galactonokinase SDA1 PF05285.12 ORF34302 - 0.025 14.0 25.9 0.029 13.8 25.9 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF34302 - 0.39 8.9 26.0 0.4 8.8 26.0 1.0 1 0 0 1 1 1 0 Nop14-like family PTPRCAP PF15713.5 ORF34302 - 0.46 10.8 15.7 0.48 10.7 14.1 1.9 2 0 0 2 2 2 0 Protein tyrosine phosphatase receptor type C-associated RNA_pol_Rpc4 PF05132.14 ORF34302 - 0.6 10.5 4.6 0.72 10.3 4.6 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 NOA36 PF06524.12 ORF34302 - 0.78 9.0 25.7 0.97 8.7 25.7 1.2 1 0 0 1 1 1 0 NOA36 protein DUF913 PF06025.12 ORF34302 - 0.83 8.6 5.3 0.86 8.5 5.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) V_ATPase_I PF01496.19 ORF34302 - 1.3 6.8 7.9 1.4 6.8 7.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NPR3 PF03666.13 ORF34302 - 1.7 7.3 12.4 2.1 7.1 12.4 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CDC45 PF02724.14 ORF34302 - 1.8 6.8 21.3 1.9 6.7 21.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Afi1 PF07792.12 ORF34302 - 1.9 9.0 15.3 2.8 8.4 15.3 1.2 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking PPP4R2 PF09184.11 ORF34302 - 2.1 7.9 21.7 2.3 7.8 21.7 1.1 1 0 0 1 1 1 0 PPP4R2 Connexin PF00029.19 ORF34302 - 3.3 7.4 3.8 3.8 7.2 3.8 1.2 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 ORF34302 - 3.4 6.3 6.9 3.1 6.5 6.9 1.1 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 ORF34302 - 3.9 6.6 5.8 3.8 6.7 5.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter PTCB-BRCT PF12738.7 ORF33676 - 0.02 14.8 0.0 0.034 14.1 0.0 1.4 1 0 0 1 1 1 0 twin BRCT domain Pilin PF00114.19 ORF33419 - 0.19 12.6 1.0 2.9 8.8 0.4 2.1 2 0 0 2 2 2 0 Pilin (bacterial filament) Defensin_1 PF00323.19 ORF30596 - 1.6 9.4 5.9 27 5.4 0.0 3.2 3 0 0 3 3 3 0 Mammalian defensin GFA PF04828.14 ORF29979 - 0.021 15.2 2.4 0.031 14.6 2.4 1.4 1 1 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme Ank_2 PF12796.7 ORF29839 - 5.4e-18 65.4 0.2 9.8e-12 45.3 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF29839 - 2.6e-15 56.1 0.8 3.5e-07 30.4 0.0 3.8 3 1 1 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF29839 - 2.3e-10 39.8 0.3 0.003 17.9 0.0 3.9 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF29839 - 1.1e-09 38.6 0.0 0.00022 21.7 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF29839 - 8.8e-08 32.3 0.5 8.3e-07 29.2 0.2 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Popeye PF04831.13 ORF29313 - 0.13 12.4 10.4 0.17 12.0 10.4 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Na_sulph_symp PF00939.19 ORF27606 - 1e-07 31.4 2.8 1.3e-07 31.1 2.8 1.1 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 ORF27606 - 6.2e-06 25.6 5.3 6.6e-06 25.5 5.3 1.0 1 0 0 1 1 1 1 Citrate transporter Cytochrome_CBB3 PF13442.6 ORF27537 - 0.097 13.0 0.4 0.14 12.5 0.4 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III Pex24p PF06398.11 ORF26878 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin EF-hand_7 PF13499.6 ORF26311 - 1.6e-13 50.9 10.0 3.1e-10 40.3 3.7 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF26311 - 2e-12 45.7 5.8 5.2e-06 25.6 0.3 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF26311 - 1.3e-10 40.3 7.2 1.5e-05 24.5 1.4 3.4 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF26311 - 3.5e-08 32.6 5.3 0.00097 18.5 0.3 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF26311 - 3.7e-06 26.7 7.0 0.00026 20.8 0.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF26311 - 9.5e-05 22.7 1.0 0.0083 16.4 0.6 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region LXG PF04740.12 ORF26311 - 0.0014 18.3 0.5 0.0022 17.8 0.5 1.3 1 0 0 1 1 1 1 LXG domain of WXG superfamily NitrOD5 PF11537.8 ORF26311 - 0.007 16.5 1.0 0.024 14.8 0.3 2.1 1 1 1 2 2 2 1 Nitrosopumilus output domain 5 EF-hand_10 PF14788.6 ORF26311 - 0.016 15.1 3.8 0.84 9.5 0.4 2.5 2 1 0 2 2 2 0 EF hand p25-alpha PF05517.12 ORF26311 - 0.034 14.3 1.6 0.073 13.2 0.7 1.9 1 1 1 2 2 2 0 p25-alpha Glycos_trans_3N PF02885.17 ORF26311 - 0.037 13.9 0.2 4.1 7.3 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain HTH_57 PF18679.1 ORF26311 - 0.17 12.2 0.6 1.9 8.8 0.1 2.0 1 1 1 2 2 2 0 ThcOx helix turn helix domain Polysacc_syn_2C PF08485.10 ORF26311 - 0.46 10.2 3.7 8.9 6.1 0.1 2.8 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal PduV-EutP PF10662.9 ORF26271 - 2e-13 50.3 0.0 2.9e-13 49.8 0.0 1.3 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 ORF26271 - 0.016 14.7 0.0 0.02 14.4 0.0 1.1 1 0 0 1 1 1 0 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF26271 - 0.096 12.6 0.0 0.16 11.9 0.0 1.3 1 1 0 1 1 1 0 RsgA GTPase MMR_HSR1_Xtn PF16897.5 ORF26271 - 0.14 12.2 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain CitMHS PF03600.16 ORF2624 - 6.2 5.9 11.2 7.3 5.7 11.2 1.1 1 0 0 1 1 1 0 Citrate transporter SepSecS PF05889.13 ORF25688 - 0.24 10.0 0.3 0.26 9.9 0.3 1.1 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS PAGK PF15284.6 ORF25028 - 0.005 16.7 0.8 0.0078 16.1 0.1 1.7 2 0 0 2 2 2 1 Phage-encoded virulence factor EF-hand_7 PF13499.6 ORF24409 - 1.6e-13 50.9 10.0 3.1e-10 40.3 3.7 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF24409 - 2e-12 45.7 5.8 5.2e-06 25.6 0.3 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF24409 - 1.3e-10 40.3 7.2 1.5e-05 24.5 1.4 3.4 3 1 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF24409 - 3.5e-08 32.6 5.3 0.00097 18.5 0.3 3.4 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF24409 - 3.7e-06 26.7 7.0 0.00026 20.8 0.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF24409 - 9.5e-05 22.7 1.0 0.0083 16.4 0.6 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region LXG PF04740.12 ORF24409 - 0.0014 18.3 0.5 0.0022 17.8 0.5 1.3 1 0 0 1 1 1 1 LXG domain of WXG superfamily NitrOD5 PF11537.8 ORF24409 - 0.007 16.5 1.0 0.024 14.8 0.3 2.1 1 1 1 2 2 2 1 Nitrosopumilus output domain 5 EF-hand_10 PF14788.6 ORF24409 - 0.016 15.1 3.8 0.84 9.5 0.4 2.5 2 1 0 2 2 2 0 EF hand p25-alpha PF05517.12 ORF24409 - 0.034 14.3 1.6 0.073 13.2 0.7 1.9 1 1 1 2 2 2 0 p25-alpha Glycos_trans_3N PF02885.17 ORF24409 - 0.037 13.9 0.2 4.1 7.3 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain HTH_57 PF18679.1 ORF24409 - 0.17 12.2 0.6 1.9 8.8 0.1 2.0 1 1 1 2 2 2 0 ThcOx helix turn helix domain Polysacc_syn_2C PF08485.10 ORF24409 - 0.46 10.2 3.7 8.9 6.1 0.1 2.8 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal DUF905 PF06006.12 ORF21501 - 0.028 14.4 0.1 0.054 13.5 0.1 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF905) DUF5393 PF17371.2 ORF19425 - 0.012 13.8 0.7 0.013 13.7 0.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5393) PAT1 PF09770.9 ORF1906 - 3 6.0 7.2 3.2 5.9 7.2 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 LSM PF01423.22 ORF18003 - 7.6e-16 57.6 0.3 1e-15 57.1 0.3 1.2 1 0 0 1 1 1 1 LSM domain Pex24p PF06398.11 ORF16893 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Ribosomal_S14 PF00253.21 ORF16866 - 0.022 14.5 1.2 0.022 14.5 1.2 2.0 1 1 1 2 2 2 0 Ribosomal protein S14p/S29e MLTD_N PF06474.12 ORF16790 - 0.084 13.1 2.1 1.6 9.0 1.2 2.6 2 0 0 2 2 2 0 MltD lipid attachment motif Zip PF02535.22 ORF15350 - 3.9e-18 65.8 7.6 4.7e-18 65.5 7.6 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter DUF1129 PF06570.11 ORF15350 - 0.2 11.1 4.7 0.11 11.9 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3397 PF11877.8 ORF15350 - 5.6 7.2 11.5 25 5.1 7.6 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3397) NOB1_Zn_bind PF08772.11 ORF152776 - 0.13 12.5 1.3 0.25 11.5 1.3 1.5 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DZR PF12773.7 ORF152776 - 0.28 11.2 4.8 0.7 10.0 4.8 1.7 1 1 0 1 1 1 0 Double zinc ribbon Atg8 PF02991.16 ORF152590 - 4e-26 91.2 1.1 4.9e-26 90.9 1.1 1.1 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF152590 - 1.9e-07 31.4 0.2 1.9e-07 31.4 0.2 1.4 2 0 0 2 2 2 1 Ubiquitin-like autophagy protein Apg12 7TM_GPCR_Srz PF10325.9 ORF152590 - 0.031 13.6 0.3 0.038 13.3 0.3 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srz Myotoxins PF00819.17 ORF15224 - 1.6 9.1 7.2 0.24 11.7 2.5 2.0 2 0 0 2 2 2 0 Myotoxin, crotamine Caa3_CtaG PF09678.10 ORF151799 - 0.014 14.9 2.6 0.019 14.5 2.1 1.5 1 1 1 2 2 2 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) zf-AN1 PF01428.16 ORF151661 - 5.5e-10 39.2 11.5 5.5e-10 39.2 11.5 1.7 2 0 0 2 2 2 1 AN1-like Zinc finger RPAP2_Rtr1 PF04181.13 ORF151661 - 0.033 14.5 0.6 0.033 14.5 0.6 1.8 2 1 0 2 2 2 0 Rtr1/RPAP2 family zf-RING_5 PF14634.6 ORF151661 - 5.4 7.1 13.4 6.3 6.9 0.1 2.5 2 1 0 2 2 2 0 zinc-RING finger domain Binary_toxB_3 PF17476.2 ORF151141 - 0.33 11.1 3.6 0.32 11.2 2.6 1.6 1 1 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA domain 3 SAP18 PF06487.12 ORF150626 - 0.0044 17.2 0.1 0.0053 16.9 0.1 1.1 1 0 0 1 1 1 1 Sin3 associated polypeptide p18 (SAP18) DUF948 PF06103.11 ORF14991 - 0.0011 19.1 1.2 0.002 18.4 0.5 1.6 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) Pyr_excise PF03013.14 ORF14991 - 0.014 15.4 1.6 0.017 15.1 1.6 1.2 1 0 0 1 1 1 0 Pyrimidine dimer DNA glycosylase LXG PF04740.12 ORF14991 - 0.019 14.6 5.8 0.35 10.6 0.2 2.1 1 1 1 2 2 2 0 LXG domain of WXG superfamily Spc7 PF08317.11 ORF14991 - 0.023 13.6 6.2 0.028 13.3 6.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein TMPIT PF07851.13 ORF14991 - 0.027 13.7 6.2 0.036 13.3 6.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein Laminin_I PF06008.14 ORF14991 - 0.027 14.2 4.6 0.031 14.0 4.6 1.1 1 0 0 1 1 1 0 Laminin Domain I Ribosomal_L13e PF01294.18 ORF14991 - 0.046 13.6 3.5 0.065 13.1 3.5 1.1 1 0 0 1 1 1 0 Ribosomal protein L13e DUF2089 PF09862.9 ORF14991 - 0.064 13.3 1.3 0.087 12.9 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) DUF3958 PF13125.6 ORF14991 - 0.083 13.1 7.1 0.099 12.9 7.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) ATP-synt_F6 PF05511.11 ORF14991 - 0.093 13.1 6.7 0.32 11.4 1.3 2.1 1 1 1 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 UPF0242 PF06785.11 ORF14991 - 0.094 12.8 7.1 0.1 12.7 7.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FlaC_arch PF05377.11 ORF14991 - 0.15 12.5 11.8 1.8 9.0 0.8 3.2 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) Goodbye PF17109.5 ORF14991 - 0.23 11.9 2.7 8.8 6.8 1.1 2.3 1 1 1 2 2 2 0 fungal STAND N-terminal Goodbye domain YabA PF06156.13 ORF14991 - 0.3 11.8 6.3 0.44 11.2 6.3 1.3 1 0 0 1 1 1 0 Initiation control protein YabA Snapin_Pallidin PF14712.6 ORF14991 - 0.53 10.7 8.2 1.8 9.0 3.7 2.2 1 1 1 2 2 2 0 Snapin/Pallidin DUF4298 PF14131.6 ORF14991 - 0.73 9.8 6.9 3.3 7.7 0.2 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4298) DUF2951 PF11166.8 ORF14991 - 1.5 9.1 7.5 0.9 9.8 3.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) DUF1492 PF07374.11 ORF14991 - 1.5 9.1 10.1 0.61 10.3 1.7 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1492) ZapB PF06005.12 ORF14991 - 4.2 7.9 9.8 21 5.7 0.2 2.6 2 1 1 3 3 3 0 Cell division protein ZapB PrgI PF12666.7 ORF149498 - 0.18 12.6 2.3 0.25 12.1 1.9 1.5 1 1 0 1 1 1 0 PrgI family protein Arm-DNA-bind_5 PF17293.2 ORF148886 - 0.11 12.9 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 Arm DNA-binding domain gp45-slide_C PF09116.10 ORF148723 - 0.017 15.2 0.3 0.024 14.7 0.3 1.3 1 0 0 1 1 1 0 gp45 sliding clamp, C terminal Ras PF00071.22 ORF148663 - 4.1e-16 59.0 0.2 5.9e-16 58.5 0.2 1.2 1 0 0 1 1 1 1 Ras family MMR_HSR1_Xtn PF16897.5 ORF148663 - 0.0061 16.5 0.2 0.0098 15.9 0.2 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain AAA_24 PF13479.6 ORF148663 - 0.017 14.8 0.2 0.02 14.6 0.2 1.1 1 0 0 1 1 1 0 AAA domain Roc PF08477.13 ORF148663 - 0.024 14.8 0.3 0.14 12.4 0.0 2.0 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase DASH_Spc19 PF08287.11 ORF148663 - 0.028 14.3 0.0 0.047 13.6 0.0 1.3 1 0 0 1 1 1 0 Spc19 GTP_EFTU PF00009.27 ORF148663 - 0.087 12.4 0.1 0.17 11.4 0.1 1.5 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain HMG-CoA_red PF00368.18 ORF148663 - 0.12 11.4 0.4 0.51 9.3 0.0 1.8 1 1 1 2 2 2 0 Hydroxymethylglutaryl-coenzyme A reductase CitMHS PF03600.16 ORF14756 - 6.2 5.9 11.2 7.3 5.7 11.2 1.1 1 0 0 1 1 1 0 Citrate transporter Allexi_40kDa PF05549.11 ORF147301 - 0.22 11.0 2.3 0.26 10.8 2.3 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein RNA_bind PF08675.11 ORF147301 - 0.35 10.9 1.9 1.2 9.2 0.1 2.1 2 0 0 2 2 2 0 RNA binding domain Fzo_mitofusin PF04799.13 ORF147301 - 0.41 10.2 5.0 0.35 10.4 3.6 1.6 1 1 1 2 2 2 0 fzo-like conserved region eIF_4EBP PF05456.11 ORF145543 - 0.099 12.6 0.2 0.13 12.2 0.2 1.3 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) MCCD1 PF15707.5 ORF14480 - 0.22 12.0 0.4 0.4 11.2 0.4 1.6 1 0 0 1 1 1 0 Mitochondrial coiled-coil domain protein 1 GP40 PF11025.8 ORF142975 - 0.013 15.3 0.0 0.024 14.4 0.0 1.3 1 1 0 1 1 1 0 Glycoprotein GP40 of Cryptosporidium DUF5544 PF17698.1 ORF142953 - 0.0007 19.7 3.0 0.00098 19.2 3.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5544) CitMHS PF03600.16 ORF142737 - 6.2 5.9 11.2 7.3 5.7 11.2 1.1 1 0 0 1 1 1 0 Citrate transporter HTH_Tnp_ISL3 PF13542.6 ORF142006 - 0.048 13.1 0.1 0.089 12.2 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 DUF4860 PF16152.5 ORF141929 - 0.14 12.0 0.0 1.3 9.0 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4860) DUF2383 PF09537.10 ORF141766 - 0.039 14.3 0.1 0.052 13.9 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF2383) Pkr1 PF08636.10 ORF141486 - 2 8.6 7.6 5.4 7.2 2.7 2.2 2 0 0 2 2 2 0 ER protein Pkr1 zf-TRM13_CCCH PF11722.8 ORF141226 - 0.66 9.8 0.2 0.66 9.8 0.2 3.2 3 0 0 3 3 3 0 CCCH zinc finger in TRM13 protein UBA PF00627.31 ORF140843 - 0.086 12.8 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 UBA/TS-N domain P22_portal PF16510.5 ORF140407 - 0.014 14.1 0.5 0.81 8.2 0.0 2.0 1 1 1 2 2 2 0 Phage P22-like portal protein Ank_5 PF13857.6 ORF139603 - 4.9e-16 58.6 0.0 1.9e-07 31.2 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF139603 - 7.4e-15 55.3 0.2 1e-14 54.8 0.2 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF139603 - 3e-13 49.6 0.0 6.3e-06 26.4 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF139603 - 7.5e-13 48.7 0.0 1.2e-12 48.0 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF139603 - 2e-12 46.1 0.0 2.5e-05 24.3 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat AOX PF01786.17 ORF13857 - 1 8.9 4.0 1.5 8.3 4.0 1.2 1 0 0 1 1 1 0 Alternative oxidase DUF3232 PF11554.8 ORF138037 - 0.0049 17.3 0.3 0.0061 16.9 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3232) PYRIN PF02758.16 ORF138037 - 0.038 14.1 0.4 0.064 13.4 0.4 1.3 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain CheF-arch PF04283.12 ORF138037 - 0.046 13.5 0.0 0.047 13.4 0.0 1.1 1 0 0 1 1 1 0 Chemotaxis signal transduction system protein F from archaea Pex24p PF06398.11 ORF136066 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin LMBR1 PF04791.16 ORF135909 - 3.9 6.3 7.0 4.4 6.1 7.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2968 PF11180.8 ORF135319 - 0.065 12.9 4.3 0.23 11.1 4.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2968) Prefoldin_2 PF01920.20 ORF135319 - 0.1 12.6 16.2 5.9 6.9 12.9 2.6 1 1 1 2 2 2 0 Prefoldin subunit DAGAT PF03982.13 ORF135319 - 0.14 11.1 0.1 0.14 11.0 0.1 1.1 1 0 0 1 1 1 0 Diacylglycerol acyltransferase DUF1664 PF07889.12 ORF135319 - 0.25 11.4 8.3 0.79 9.8 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Prefoldin PF02996.17 ORF135319 - 0.29 11.0 10.8 0.055 13.4 2.1 2.3 1 1 0 2 2 2 0 Prefoldin subunit BLOC1_2 PF10046.9 ORF135319 - 0.33 11.3 11.1 0.21 11.9 1.4 2.6 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ParB PF08775.10 ORF135319 - 0.46 11.0 9.0 2.2 8.7 1.1 2.1 2 0 0 2 2 2 0 ParB family DivIC PF04977.15 ORF135319 - 0.7 9.7 10.7 0.93 9.3 0.6 2.6 2 1 1 3 3 3 0 Septum formation initiator PRKG1_interact PF15898.5 ORF135319 - 1.1 10.1 10.1 4.5 8.2 10.1 1.8 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain FlaC_arch PF05377.11 ORF135319 - 1.2 9.5 7.7 6.5 7.2 1.4 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) SlyX PF04102.12 ORF135319 - 1.5 9.5 7.7 0.99 10.1 0.4 3.1 1 1 1 3 3 3 0 SlyX DUF4446 PF14584.6 ORF135319 - 1.8 8.6 8.2 2.4 8.1 1.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) XhlA PF10779.9 ORF135319 - 2 8.7 10.3 6.7 7.0 2.8 2.4 2 0 0 2 2 2 0 Haemolysin XhlA ZapB PF06005.12 ORF135319 - 2.7 8.5 13.8 2.4e+02 2.3 12.9 2.5 1 1 1 2 2 2 0 Cell division protein ZapB DUF4407 PF14362.6 ORF135319 - 7.4 5.8 9.7 50 3.1 9.7 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) MORN PF02493.20 ORF134644 - 4.2e-08 32.6 5.6 6.3e-05 22.6 0.2 3.5 3 0 0 3 3 3 3 MORN repeat DUF1826 PF08856.11 ORF134624 - 1.7e-07 31.4 0.0 2e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1826) DUF997 PF06196.12 ORF134290 - 0.045 13.8 0.2 0.069 13.2 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF997) GWT1 PF06423.12 ORF133013 - 0.16 12.1 3.6 0.083 13.0 1.9 1.5 1 1 1 2 2 2 0 GWT1 Pex24p PF06398.11 ORF132737 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin FKBP26_C PF18046.1 ORF131867 - 0.079 13.1 0.1 0.16 12.1 0.1 1.6 1 1 0 1 1 1 0 FKBP26_C-terminal CitMHS PF03600.16 ORF131391 - 6.2 5.9 11.2 7.3 5.7 11.2 1.1 1 0 0 1 1 1 0 Citrate transporter EMP24_GP25L PF01105.24 ORF13051 - 9.7e-08 32.2 0.2 1.2e-07 31.8 0.2 1.1 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Phage_int_SAM_2 PF12834.7 ORF130302 - 0.047 14.4 0.9 0.059 14.1 0.9 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal Snapin_Pallidin PF14712.6 ORF130302 - 0.066 13.6 10.3 0.59 10.6 1.4 3.0 1 1 2 3 3 3 0 Snapin/Pallidin DUF2537 PF10801.8 ORF129101 - 0.063 13.5 1.5 0.063 13.5 1.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2537) DUF3687 PF12459.8 ORF1283 - 0.53 9.8 2.9 0.95 9.0 0.1 2.2 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein UBA PF00627.31 ORF128106 - 0.086 12.8 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 UBA/TS-N domain Cyclotide PF03784.13 ORF127547 - 0.11 12.7 0.7 0.11 12.7 0.7 2.2 3 0 0 3 3 3 0 Cyclotide family Pap_E4 PF02711.14 ORF127448 - 0.85 10.6 9.9 0.18 12.8 6.6 1.6 1 1 1 2 2 2 0 E4 protein DUF927 PF06048.11 ORF12644 - 0.099 12.2 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF927) Viral_DNA_bi PF02236.17 ORF125843 - 0.075 13.2 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Viral DNA-binding protein, all alpha domain DUF4706 PF15797.5 ORF125843 - 0.11 13.0 1.8 0.2 12.2 0.7 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4706) Rootletin PF15035.6 ORF125843 - 0.17 11.9 5.4 2.9 7.9 5.4 2.0 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion GBP_C PF02841.14 ORF125843 - 0.29 10.5 7.4 0.32 10.3 7.4 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain UreE_C PF05194.12 ORF125819 - 0.21 12.1 6.3 0.34 11.4 6.3 1.4 1 1 0 1 1 1 0 UreE urease accessory protein, C-terminal domain C166 PF17615.2 ORF125196 - 0.066 13.4 0.1 0.075 13.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function Tad PF13400.6 ORF122979 - 7.1 7.0 8.2 0.52 10.7 1.3 2.1 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like CitMHS PF03600.16 ORF122707 - 6.2 5.9 11.2 7.3 5.7 11.2 1.1 1 0 0 1 1 1 0 Citrate transporter zf-H2C2_5 PF13909.6 ORF122017 - 0.054 13.3 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 C2H2-type zinc-finger domain Bac_small_YrzI PF09501.10 ORF120007 - 2.3 8.4 7.3 1.6 8.9 4.5 2.1 2 0 0 2 2 2 0 Probable sporulation protein (Bac_small_yrzI) DUF4741 PF15897.5 ORF119478 - 0.015 15.1 0.3 0.016 15.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) CPV_Polyhedrin PF17515.2 ORF119144 - 0.0027 17.2 0.1 0.0031 16.9 0.1 1.1 1 0 0 1 1 1 1 Cypovirus polyhedrin Kinesin PF00225.23 ORF118750 - 8.2e-30 103.9 0.3 9e-30 103.7 0.3 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF118750 - 2.3e-27 95.8 0.3 2.6e-27 95.6 0.3 1.0 1 0 0 1 1 1 1 Microtubule binding ATPase_2 PF01637.18 ORF118750 - 0.091 12.7 0.7 2 8.3 0.1 2.1 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea Med3 PF11593.8 ORF117969 - 0.88 8.7 6.1 1 8.5 6.1 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Tic110 PF16940.5 ORF117969 - 8.8 4.7 6.4 10 4.5 6.4 1.1 1 0 0 1 1 1 0 Chloroplast envelope transporter DUF745 PF05335.13 ORF117969 - 8.9 6.0 15.4 12 5.6 15.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) PRA1 PF03208.19 ORF117743 - 0.049 13.3 2.2 0.066 12.8 2.2 1.1 1 0 0 1 1 1 0 PRA1 family protein ALF PF03752.13 ORF117261 - 0.063 13.3 0.6 0.1 12.6 0.6 1.3 1 0 0 1 1 1 0 Short repeats of unknown function DUF1082 PF06449.11 ORF117004 - 0.25 11.2 2.7 0.95 9.3 1.0 2.4 3 0 0 3 3 3 0 Mitochondrial domain of unknown function (DUF1082) DUF951 PF06107.11 ORF116555 - 0.079 12.9 1.0 0.88 9.5 0.1 2.3 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) ProRS-C_1 PF09180.11 ORF116477 - 2.6e-24 85.2 0.0 3.5e-24 84.8 0.0 1.2 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal Mito_carr PF00153.27 ORF116092 - 3.6e-20 71.7 0.1 4.2e-20 71.5 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein Laminin_G_3 PF13385.6 ORF115530 - 1e-06 29.0 0.0 1.4e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Lactamase_B PF00753.27 ORF115530 - 0.064 13.3 0.1 0.088 12.8 0.1 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily DUF469 PF04320.14 ORF115003 - 1.5e-42 144.5 0.6 1.7e-42 144.3 0.6 1.0 1 0 0 1 1 1 1 Protein with unknown function (DUF469) ArgoMid PF16487.5 ORF114382 - 0.0045 17.2 0.1 0.0061 16.8 0.1 1.3 1 0 0 1 1 1 1 Mid domain of argonaute zf-C4 PF00105.18 ORF114382 - 0.057 13.9 0.5 0.38 11.2 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C4 type (two domains) O-antigen_lig PF13425.6 ORF113296 - 0.92 8.2 4.1 1.1 8.0 4.1 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein RIX1 PF08167.12 ORF112110 - 0.013 15.3 0.4 0.015 15.0 0.4 1.2 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis Ins_beta PF03488.14 ORF110976 - 0.0053 16.7 2.0 0.15 12.1 0.5 2.3 2 0 0 2 2 2 2 Nematode insulin-related peptide beta type Homeobox_KN PF05920.11 ORF109595 - 1.6e-11 43.9 0.7 2.8e-11 43.1 0.7 1.3 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF109595 - 5.2e-06 26.2 0.2 8.7e-06 25.5 0.2 1.4 1 0 0 1 1 1 1 Homeodomain Phage_int_SAM_2 PF12834.7 ORF109493 - 0.047 14.4 0.9 0.059 14.1 0.9 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal Snapin_Pallidin PF14712.6 ORF109493 - 0.066 13.6 10.3 0.59 10.6 1.4 3.0 1 1 2 3 3 3 0 Snapin/Pallidin CSD PF00313.22 ORF107858 - 1.4e-32 111.3 1.6 1.8e-32 111.0 1.6 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF107858 - 0.0029 17.3 0.1 0.005 16.5 0.1 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain Pex24p PF06398.11 ORF106683 - 0.21 10.5 3.8 0.25 10.3 3.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin CN_hydrolase PF00795.22 ORF106524 - 0.14 11.4 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Carbon-nitrogen hydrolase AOX PF01786.17 ORF104478 - 1 8.9 4.0 1.5 8.3 4.0 1.2 1 0 0 1 1 1 0 Alternative oxidase DUF5584 PF17822.1 ORF103248 - 0.0054 16.2 0.0 0.0067 15.9 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5584) Baculo_ODV-E27 PF05314.11 ORF102853 - 0.0051 16.0 1.1 0.0065 15.7 1.1 1.2 1 0 0 1 1 1 1 Baculovirus occlusion-derived virus envelope protein EC27 Ribosomal_L21e PF01157.18 ORF102853 - 0.055 13.3 0.6 0.23 11.3 0.1 1.9 1 1 1 2 2 2 0 Ribosomal protein L21e SPT2 PF08243.11 ORF102853 - 0.24 12.0 3.4 0.28 11.7 3.1 1.3 1 1 0 1 1 1 0 SPT2 chromatin protein CHASE7 PF17151.4 ORF102575 - 0.06 12.9 0.0 0.073 12.7 0.0 1.1 1 0 0 1 1 1 0 Periplasmic sensor domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks224.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks224.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks224.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks224.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:09:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Borrelia_lipo_1 PF05714.11 NODE_51756_length_349_cov_1.216561_g43842_i0forward_frame_1 - 0.0086 15.9 0.2 0.01 15.6 0.2 1.1 1 0 0 1 1 1 1 Borrelia burgdorferi virulent strain associated lipoprotein DUF5562 PF17717.1 NODE_51753_length_349_cov_1.624204_g43839_i0reverse_frame_1 - 0.027 14.5 0.0 0.039 13.9 0.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5562) DUF1492 PF07374.11 NODE_51753_length_349_cov_1.624204_g43839_i0forward_frame_1 - 0.021 15.0 0.0 0.028 14.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) C2-C2_1 PF11618.8 NODE_51749_length_349_cov_1.789809_g43835_i0reverse_frame_1 - 2.5e-13 50.3 0.0 3e-13 50.0 0.0 1.0 1 0 0 1 1 1 1 First C2 domain of RPGR-interacting protein 1 TRAP_beta PF05753.14 NODE_51745_length_349_cov_1.949045_g43831_i0reverse_frame_1 - 0.044 13.2 0.0 0.057 12.8 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) AMP-binding PF00501.28 NODE_51732_length_349_cov_2.592357_g43818_i0forward_frame_1 - 5.3e-33 114.2 0.0 5.7e-33 114.1 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme DUF3045 PF11243.8 NODE_51725_length_349_cov_3.070064_g43811_i0reverse_frame_1 - 0.11 12.7 0.2 0.18 12.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3045) T4-Gluco-transf PF09198.10 NODE_51725_length_349_cov_3.070064_g43811_i0reverse_frame_1 - 0.15 11.7 0.0 0.15 11.7 0.0 2.0 2 0 0 2 2 2 0 Bacteriophage T4 beta-glucosyltransferase EF-hand_13 PF17958.1 NODE_51723_length_349_cov_3.535032_g43809_i0forward_frame_1 - 0.082 12.7 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain Pribosyltran PF00156.27 NODE_51721_length_349_cov_4.095541_g43807_i0reverse_frame_1 - 1.5e-10 40.8 0.0 1.6e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PAS_3 PF08447.12 NODE_51720_length_349_cov_4.095541_g43806_i0reverse_frame_1 - 0.12 12.6 0.1 0.19 12.0 0.1 1.3 1 0 0 1 1 1 0 PAS fold Molybdopterin PF00384.22 NODE_51720_length_349_cov_4.095541_g43806_i0forward_frame_1 - 4.8e-40 137.8 0.0 5.5e-40 137.6 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase SCAN PF02023.17 NODE_51720_length_349_cov_4.095541_g43806_i0forward_frame_1 - 0.14 12.0 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 SCAN domain Syd PF07348.12 NODE_51718_length_349_cov_5.060510_g43804_i0forward_frame_1 - 4.9e-22 78.4 0.1 6e-22 78.1 0.1 1.1 1 0 0 1 1 1 1 Syd protein (SUKH-2) Dpy19 PF10034.9 NODE_51715_length_349_cov_7.092357_g43801_i0reverse_frame_1 - 0.12 10.5 5.9 0.13 10.4 5.9 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation DUF3330 PF11809.8 NODE_51715_length_349_cov_7.092357_g43801_i0forward_frame_1 - 0.44 10.6 4.5 0.42 10.7 2.4 2.2 2 1 1 3 3 3 0 Domain of unknown function (DUF3330) DUF5412 PF17428.2 NODE_51710_length_349_cov_36.856688_g43796_i0forward_frame_1 - 0.023 14.6 0.1 0.029 14.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5412) SelK_SelG PF10961.8 NODE_51709_length_349_cov_42.859873_g43795_i0forward_frame_1 - 1.6 9.4 2.9 1.7 9.3 0.7 2.0 2 0 0 2 2 2 0 Selenoprotein SelK_SelG GSAP-16 PF14959.6 NODE_51692_length_349_cov_90.353503_g43778_i0forward_frame_1 - 0.12 12.3 2.9 0.2 11.5 0.1 2.0 2 0 0 2 2 2 0 gamma-Secretase-activating protein C-term PSD2 PF07624.11 NODE_51685_length_349_cov_104.872611_g43771_i0forward_frame_1 - 0.073 12.9 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1585) DUF3685 PF12452.8 NODE_51684_length_349_cov_109.210191_g43770_i0reverse_frame_1 - 0.0061 16.3 1.6 0.0067 16.1 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3685) DUF5388 PF17363.2 NODE_51684_length_349_cov_109.210191_g43770_i0reverse_frame_1 - 0.12 12.6 3.1 0.17 12.1 1.0 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5388) YfhO PF09586.10 NODE_51684_length_349_cov_109.210191_g43770_i0reverse_frame_1 - 2.1 6.5 5.0 2.4 6.3 5.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO WD40 PF00400.32 NODE_51682_length_349_cov_112.414013_g43768_i0forward_frame_1 - 1.8e-07 31.7 0.1 0.00018 22.2 0.2 2.3 2 0 0 2 2 2 2 WD domain, G-beta repeat Ge1_WD40 PF16529.5 NODE_51682_length_349_cov_112.414013_g43768_i0forward_frame_1 - 0.21 10.5 0.0 0.24 10.3 0.0 1.1 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein EbsA PF17255.2 NODE_51681_length_349_cov_119.210191_g43767_i0forward_frame_1 - 0.008 16.5 1.9 0.008 16.5 1.9 1.2 1 1 0 1 1 1 1 EbsA-like protein ApbA_C PF08546.11 NODE_51680_length_349_cov_137.385350_g43766_i0forward_frame_1 - 0.0039 17.4 0.1 0.0065 16.7 0.1 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal MDMPI_N PF11716.8 NODE_51680_length_349_cov_137.385350_g43766_i0forward_frame_1 - 0.079 13.6 0.1 0.12 13.0 0.1 1.3 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain RPAP2_Rtr1 PF04181.13 NODE_51679_length_349_cov_161.525478_g43765_i0reverse_frame_1 - 0.016 15.6 1.0 0.023 15.0 1.0 1.2 1 0 0 1 1 1 0 Rtr1/RPAP2 family zf-RING_5 PF14634.6 NODE_51679_length_349_cov_161.525478_g43765_i0reverse_frame_1 - 0.032 14.2 1.7 0.032 14.2 0.2 1.8 2 1 0 2 2 2 0 zinc-RING finger domain UPF0542 PF15086.6 NODE_51678_length_349_cov_165.684713_g43764_i0forward_frame_1 - 0.018 15.0 0.5 0.018 15.0 0.5 1.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0542 DUF2937 PF11157.8 NODE_51665_length_349_cov_411.019108_g43751_i0reverse_frame_1 - 0.011 15.4 0.1 0.013 15.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) Rhodanese PF00581.20 NODE_51664_length_349_cov_943.668790_g43750_i0reverse_frame_1 - 1e-08 35.7 0.0 1.2e-08 35.4 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain E_raikovi_mat PF06360.11 NODE_51653_length_350_cov_1.676190_g43739_i0reverse_frame_1 - 0.064 13.7 2.3 0.13 12.7 2.3 1.5 1 0 0 1 1 1 0 Euplotes raikovi mating pheromone CD45 PF12567.8 NODE_51653_length_350_cov_1.676190_g43739_i0reverse_frame_1 - 0.078 13.0 1.9 0.13 12.2 1.9 1.4 1 0 0 1 1 1 0 Leukocyte receptor CD45 SCP_3 PF17844.1 NODE_51653_length_350_cov_1.676190_g43739_i0reverse_frame_1 - 0.17 11.7 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial SCP ortholog zf-C6H2 PF15801.5 NODE_51652_length_350_cov_1.771429_g43738_i0forward_frame_1 - 0.00078 19.7 0.9 0.0016 18.7 0.9 1.5 1 0 0 1 1 1 1 zf-MYND-like zinc finger, mRNA-binding Resistin PF06954.11 NODE_51651_length_350_cov_1.790476_g43737_i0forward_frame_1 - 0.0062 17.0 1.3 0.0082 16.7 1.3 1.2 1 0 0 1 1 1 1 Resistin A-2_8-polyST PF07388.11 NODE_51648_length_350_cov_1.987302_g43734_i0reverse_frame_1 - 0.0001 21.0 1.3 0.00015 20.5 1.3 1.2 1 0 0 1 1 1 1 Alpha-2,8-polysialyltransferase (POLYST) DUF1996 PF09362.10 NODE_51648_length_350_cov_1.987302_g43734_i0reverse_frame_1 - 0.0071 16.4 1.8 0.0071 16.4 1.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1996) Glyco_hydr_30_2 PF14587.6 NODE_51647_length_350_cov_2.019048_g43733_i0reverse_frame_1 - 0.054 13.1 0.1 0.066 12.8 0.1 1.1 1 0 0 1 1 1 0 O-Glycosyl hydrolase family 30 OTCace_N PF02729.21 NODE_51637_length_350_cov_2.631746_g43723_i0reverse_frame_1 - 0.087 12.8 0.0 0.092 12.8 0.0 1.2 1 0 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Glyco_hydro_2_C PF02836.17 NODE_51636_length_350_cov_2.653968_g43722_i0reverse_frame_1 - 1.5e-15 57.1 0.0 1.8e-15 56.9 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Deltameth_res PF16020.5 NODE_51635_length_350_cov_2.755556_g43721_i0reverse_frame_1 - 0.33 10.8 0.1 0.33 10.8 0.1 1.8 2 0 0 2 2 2 0 Deltamethrin resistance MLANA PF14991.6 NODE_51630_length_350_cov_3.082540_g43716_i0forward_frame_1 - 0.31 11.3 1.0 0.67 10.3 1.0 1.5 1 1 1 2 2 2 0 Protein melan-A PRCH PF03967.13 NODE_51623_length_350_cov_34.406349_g43709_i0forward_frame_1 - 0.018 15.2 0.0 0.021 15.1 0.0 1.1 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region DUF1461 PF07314.11 NODE_51614_length_350_cov_62.558730_g43700_i0reverse_frame_1 - 0.098 12.6 0.6 0.12 12.2 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1461) NB PF04159.13 NODE_51613_length_350_cov_62.565079_g43699_i0reverse_frame_1 - 0.036 14.1 0.0 0.048 13.7 0.0 1.1 1 0 0 1 1 1 0 NB glycoprotein Tape_meas_lam_C PF09718.10 NODE_51609_length_350_cov_73.784127_g43695_i0reverse_frame_1 - 0.021 14.9 2.1 0.087 13.0 0.9 2.0 1 1 1 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) ATP-synt_B PF00430.18 NODE_51609_length_350_cov_73.784127_g43695_i0reverse_frame_1 - 3.2 7.8 15.3 4.2 7.5 13.0 1.9 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) FAM60A PF15396.6 NODE_51600_length_350_cov_106.260317_g43686_i0reverse_frame_1 - 0.81 9.6 6.7 1.3 9.0 6.7 1.4 1 0 0 1 1 1 0 Protein Family FAM60A CREPT PF16566.5 NODE_51599_length_350_cov_115.155556_g43685_i0reverse_frame_1 - 0.02 15.1 0.5 0.023 14.8 0.5 1.1 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour S6OS1 PF15676.5 NODE_51599_length_350_cov_115.155556_g43685_i0reverse_frame_1 - 0.09 11.3 2.9 0.11 11.0 2.9 1.0 1 0 0 1 1 1 0 Six6 opposite strand transcript 1 family RNaseH_C PF09293.10 NODE_51598_length_350_cov_116.015873_g43684_i0reverse_frame_1 - 0.046 14.1 0.1 0.055 13.8 0.1 1.2 1 0 0 1 1 1 0 T4 RNase H, C terminal Esterase PF00756.20 NODE_51588_length_350_cov_166.079365_g43674_i0reverse_frame_1 - 0.0014 18.4 0.8 0.0023 17.6 0.7 1.3 1 1 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 NODE_51588_length_350_cov_166.079365_g43674_i0reverse_frame_1 - 0.0023 17.4 0.7 0.0051 16.3 0.7 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 NODE_51588_length_350_cov_166.079365_g43674_i0reverse_frame_1 - 0.03 13.6 0.4 0.085 12.1 0.4 1.7 1 1 0 1 1 1 0 Serine aminopeptidase, S33 DUF716 PF04819.12 NODE_51586_length_350_cov_219.460317_g43672_i0forward_frame_1 - 0.091 12.4 0.1 0.12 12.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF716) zf-RING_5 PF14634.6 NODE_51584_length_350_cov_238.838095_g43670_i0reverse_frame_1 - 0.75 9.8 6.8 1.9 8.5 6.8 1.7 1 1 0 1 1 1 0 zinc-RING finger domain LSM PF01423.22 NODE_51580_length_350_cov_665.212698_g43666_i0forward_frame_1 - 9.8e-16 57.2 0.1 1.6e-15 56.5 0.1 1.3 1 0 0 1 1 1 1 LSM domain Acetyltransf_17 PF17668.1 NODE_51565_length_351_cov_1.946203_g43652_i0reverse_frame_1 - 0.17 12.7 0.0 0.2 12.5 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain NICE-1 PF15845.5 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_1 - 0.27 12.0 8.4 0.37 11.6 8.4 1.3 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family UcrQ PF02939.16 NODE_51558_length_351_cov_2.313291_g43645_i0reverse_frame_1 - 0.083 12.8 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 UcrQ family LacY_symp PF01306.19 NODE_51558_length_351_cov_2.313291_g43645_i0forward_frame_1 - 4.7e-20 71.8 1.8 5.4e-20 71.5 1.8 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1 PF07690.16 NODE_51558_length_351_cov_2.313291_g43645_i0forward_frame_1 - 0.00016 20.7 0.1 0.00016 20.7 0.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF5562 PF17717.1 NODE_51558_length_351_cov_2.313291_g43645_i0forward_frame_1 - 0.0062 16.5 0.0 0.0077 16.2 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5562) DUF4956 PF16316.5 NODE_51554_length_351_cov_2.496835_g43641_i0forward_frame_1 - 0.018 14.7 2.5 0.023 14.4 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4956) DUF4281 PF14108.6 NODE_51553_length_351_cov_2.496835_g43640_i0reverse_frame_1 - 0.067 13.6 0.1 0.086 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4281) TSNR_N PF04705.12 NODE_51552_length_351_cov_2.522152_g43639_i0reverse_frame_1 - 0.061 13.4 0.0 0.084 13.0 0.0 1.2 1 0 0 1 1 1 0 Thiostrepton-resistance methylase, N terminus MFS_1 PF07690.16 NODE_51551_length_351_cov_2.829114_g43638_i0forward_frame_1 - 0.00038 19.5 0.1 0.00045 19.3 0.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Scs3p PF10261.9 NODE_51550_length_351_cov_2.895570_g43637_i0reverse_frame_1 - 0.11 12.0 1.9 0.11 12.0 1.9 1.1 1 0 0 1 1 1 0 Inositol phospholipid synthesis and fat-storage-inducing TM KAR9 PF08580.10 NODE_51548_length_351_cov_2.968354_g43635_i0reverse_frame_1 - 1.8 7.0 8.5 2.1 6.8 8.5 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 FA_desaturase PF00487.24 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.048 13.5 3.2 0.053 13.4 3.2 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF3169 PF11368.8 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.053 13.0 0.5 0.053 13.0 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3169) DUF1772 PF08592.11 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.085 13.2 7.4 0.61 10.4 0.0 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF1772) Jagunal PF07086.12 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.095 12.8 2.0 0.12 12.4 2.0 1.1 1 0 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis MARVEL PF01284.23 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.098 12.7 9.6 1.6 8.8 8.6 2.4 1 1 0 1 1 1 0 Membrane-associating domain DUF2070 PF09843.9 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.11 10.7 10.0 0.13 10.6 10.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4199 PF13858.6 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.37 11.2 9.7 0.16 12.4 7.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) TMEM192 PF14802.6 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.55 9.3 6.7 2.9 6.9 0.8 2.1 1 1 1 2 2 2 0 TMEM192 family DHHC PF01529.20 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 0.7 10.0 8.4 0.15 12.2 4.7 1.8 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF3290 PF11694.8 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 1.6 8.7 6.8 2.9 7.9 5.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3290) DUF4131 PF13567.6 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_1 - 2.1 8.0 6.8 11 5.6 5.8 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) CoxIIa PF08113.11 NODE_51540_length_351_cov_4.177215_g43627_i0reverse_frame_1 - 0.13 12.1 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IIa family UTRA PF07702.13 NODE_51540_length_351_cov_4.177215_g43627_i0forward_frame_1 - 0.12 12.2 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 UTRA domain DUF4187 PF13821.6 NODE_51520_length_351_cov_82.645570_g43607_i0forward_frame_1 - 1.4e-18 66.4 2.2 2.3e-18 65.7 2.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4187) Vmethyltransf PF01660.17 NODE_51506_length_351_cov_134.433544_g43593_i0reverse_frame_1 - 0.075 11.9 0.0 0.075 11.9 0.0 1.1 1 0 0 1 1 1 0 Viral methyltransferase Acid_PPase PF12689.7 NODE_51504_length_351_cov_143.037975_g43591_i0forward_frame_1 - 3.6e-10 39.9 0.0 6.9e-10 39.0 0.0 1.5 1 1 0 1 1 1 1 Acid Phosphatase RCC1_2 PF13540.6 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_1 - 3.2e-25 87.3 19.9 1.9e-10 40.2 3.6 3.9 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat Cuticle_1 PF08140.11 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_1 - 0.013 15.5 0.0 45 4.2 0.0 3.2 3 0 0 3 3 3 0 Crustacean cuticle protein repeat RCC1 PF00415.18 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_1 - 0.04 14.5 13.2 1.3 9.7 1.4 3.9 3 2 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat TBP PF00352.21 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_1 - 0.25 11.3 0.1 43 4.2 0.0 2.9 1 1 1 3 3 3 0 Transcription factor TFIID (or TATA-binding protein, TBP) PhnA_Zn_Ribbon PF08274.12 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_1 - 0.022 14.7 14.0 1.9 8.5 0.1 3.8 4 0 0 4 4 4 0 PhnA Zinc-Ribbon Lactamase_B_6 PF16661.5 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_1 - 0.18 11.3 0.0 35 3.7 0.0 2.8 2 1 1 3 3 3 0 Metallo-beta-lactamase superfamily domain Zn-ribbon_8 PF09723.10 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_1 - 0.3 11.2 23.2 1.2 9.3 0.3 3.9 1 1 2 3 3 3 0 Zinc ribbon domain zinc_ribbon_9 PF14369.6 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_1 - 4.1 7.8 28.9 2 8.8 0.2 5.0 3 1 2 5 5 5 0 zinc-ribbon GTP_EFTU PF00009.27 NODE_51496_length_351_cov_657.167722_g43583_i0forward_frame_1 - 2.4e-35 121.9 1.1 2.7e-35 121.7 1.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_51496_length_351_cov_657.167722_g43583_i0forward_frame_1 - 0.027 14.6 0.1 0.055 13.6 0.1 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase Ribosomal_L22 PF00237.19 NODE_51489_length_351_cov_61498.658228_g43577_i0forward_frame_1 - 0.063 13.5 1.1 0.092 13.0 1.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L22p/L17e cNMP_binding PF00027.29 NODE_51486_length_352_cov_1.741325_g43574_i0reverse_frame_3 - 8.3e-06 25.8 0.0 2.7e-05 24.2 0.0 1.8 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain Globin PF00042.22 NODE_51486_length_352_cov_1.741325_g43574_i0reverse_frame_3 - 6.2e-05 23.5 0.0 7.8e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Globin Curto_V2 PF07325.11 NODE_51486_length_352_cov_1.741325_g43574_i0reverse_frame_3 - 0.04 13.8 0.2 0.055 13.3 0.2 1.3 1 0 0 1 1 1 0 Curtovirus V2 protein PMP1_2 PF08114.11 NODE_51484_length_352_cov_1.794953_g43572_i0reverse_frame_3 - 0.062 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 ATPase proteolipid family FeS PF04060.13 NODE_51484_length_352_cov_1.794953_g43572_i0forward_frame_2 - 0.19 11.4 1.3 0.25 11.0 0.6 1.6 2 0 0 2 2 2 0 Putative Fe-S cluster Tcf25 PF04910.14 NODE_51482_length_352_cov_1.839117_g43570_i0forward_frame_3 - 0.076 12.1 1.4 0.077 12.1 1.4 1.1 1 0 0 1 1 1 0 Transcriptional repressor TCF25 Nodulin PF02451.15 NODE_51480_length_352_cov_1.952681_g43568_i0reverse_frame_2 - 0.013 14.9 3.3 0.016 14.7 3.3 1.1 1 0 0 1 1 1 0 Nodulin Multi_ubiq PF14452.6 NODE_51477_length_352_cov_2.018927_g43565_i0reverse_frame_2 - 0.024 14.8 0.0 0.045 14.0 0.0 1.4 1 0 0 1 1 1 0 Multiubiquitin COX14 PF14880.6 NODE_51477_length_352_cov_2.018927_g43565_i0forward_frame_3 - 0.066 13.1 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Cytochrome oxidase c assembly YabA PF06156.13 NODE_51470_length_352_cov_2.287066_g43558_i0forward_frame_2 - 0.00069 20.2 0.2 0.001 19.7 0.2 1.4 1 0 0 1 1 1 1 Initiation control protein YabA Longin PF13774.6 NODE_51469_length_352_cov_2.514196_g43557_i0reverse_frame_2 - 2.3e-10 40.4 0.1 2.9e-10 40.0 0.1 1.2 1 0 0 1 1 1 1 Regulated-SNARE-like domain LDcluster4 PF18306.1 NODE_51469_length_352_cov_2.514196_g43557_i0forward_frame_3 - 0.079 12.5 0.0 0.087 12.4 0.0 1.1 1 0 0 1 1 1 0 SLOG cluster4 family Thioredoxin PF00085.20 NODE_51467_length_352_cov_2.649842_g43555_i0reverse_frame_3 - 1e-08 35.1 0.3 1.2e-08 34.9 0.3 1.2 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 NODE_51467_length_352_cov_2.649842_g43555_i0reverse_frame_3 - 6.3e-05 22.5 0.0 6.5e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_6 PF13848.6 NODE_51467_length_352_cov_2.649842_g43555_i0reverse_frame_3 - 0.055 13.4 0.0 0.064 13.2 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain DIM1 PF02966.16 NODE_51467_length_352_cov_2.649842_g43555_i0reverse_frame_3 - 0.066 13.0 0.1 0.081 12.7 0.1 1.2 1 0 0 1 1 1 0 Mitosis protein DIM1 LRR_6 PF13516.6 NODE_51466_length_352_cov_2.772871_g43554_i0forward_frame_3 - 0.0026 17.7 0.1 2.9 8.2 0.0 2.6 2 0 0 2 2 2 2 Leucine Rich repeat Sh_2 PF17512.2 NODE_51460_length_352_cov_3.621451_g43548_i0forward_frame_2 - 0.01 15.6 0.5 0.016 15.0 0.5 1.3 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein DUF645 PF04875.12 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_3 - 0.073 13.1 2.3 3.3 7.8 0.3 2.5 2 1 0 2 2 2 0 Protein of unknown function, DUF645 Cluap1 PF10234.9 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.029 13.8 14.5 0.033 13.6 1.5 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 DUF4349 PF14257.6 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.18 11.2 1.7 0.58 9.6 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4349) DUF1664 PF07889.12 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.22 11.6 6.0 8.4 6.4 5.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.34 10.9 8.5 1.8 8.5 2.5 2.1 1 1 1 2 2 2 0 Laminin Domain II BST2 PF16716.5 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 0.44 11.2 6.9 0.39 11.3 2.5 2.2 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 XhlA PF10779.9 NODE_51454_length_352_cov_59.009464_g43542_i0forward_frame_2 - 2.7 8.3 11.4 1.2 9.4 1.8 2.5 1 1 2 3 3 3 0 Haemolysin XhlA Svs_4_5_6 PF17381.2 NODE_51451_length_352_cov_73.429022_g43539_i0reverse_frame_2 - 0.092 13.7 1.3 0.14 13.1 0.0 1.8 2 0 0 2 2 2 0 Seminal vesicle secretory proteins 4/5/6 EamA PF00892.20 NODE_51444_length_352_cov_87.716088_g43532_i0reverse_frame_3 - 5.4e-05 23.4 1.9 7.6e-05 22.9 1.9 1.2 1 0 0 1 1 1 1 EamA-like transporter family PAP2_C PF14360.6 NODE_51444_length_352_cov_87.716088_g43532_i0reverse_frame_3 - 0.099 13.2 1.6 0.12 12.9 0.1 1.8 2 0 0 2 2 2 0 PAP2 superfamily C-terminal EGF PF00008.27 NODE_51442_length_352_cov_89.798107_g43530_i0reverse_frame_3 - 0.25 11.7 5.6 2.9 8.3 0.1 3.2 3 0 0 3 3 3 0 EGF-like domain DUF725 PF05267.12 NODE_51440_length_352_cov_93.091483_g43528_i0forward_frame_2 - 0.052 13.5 0.0 0.066 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF725) FGGY_C PF02782.16 NODE_51440_length_352_cov_93.091483_g43528_i0forward_frame_2 - 0.089 12.5 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain KOW PF00467.29 NODE_51439_length_352_cov_95.195584_g43527_i0reverse_frame_2 - 0.0035 17.2 0.2 0.0079 16.1 0.2 1.6 1 0 0 1 1 1 1 KOW motif TFIIS_C PF01096.18 NODE_51436_length_352_cov_101.104101_g43524_i0forward_frame_2 - 0.02 14.7 1.7 0.46 10.4 0.5 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) TAF4 PF05236.14 NODE_51434_length_352_cov_117.154574_g43522_i0reverse_frame_2 - 0.16 11.7 3.3 0.18 11.5 3.3 1.0 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family CCDC106 PF15794.5 NODE_51434_length_352_cov_117.154574_g43522_i0reverse_frame_2 - 0.72 9.5 4.3 0.77 9.4 4.3 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 SSP160 PF06933.11 NODE_51434_length_352_cov_117.154574_g43522_i0reverse_frame_2 - 0.81 7.8 19.2 0.79 7.9 19.2 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Apt1 PF10351.9 NODE_51434_length_352_cov_117.154574_g43522_i0reverse_frame_2 - 1.7 7.4 8.0 1.9 7.3 8.0 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF4614 PF15391.6 NODE_51434_length_352_cov_117.154574_g43522_i0reverse_frame_2 - 5.6 6.9 14.5 7.1 6.6 14.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) Macoilin PF09726.9 NODE_51434_length_352_cov_117.154574_g43522_i0reverse_frame_2 - 6 5.3 10.3 6.7 5.1 10.3 1.0 1 0 0 1 1 1 0 Macoilin family Chorion_2 PF03964.15 NODE_51434_length_352_cov_117.154574_g43522_i0reverse_frame_2 - 9.3 7.2 14.1 15 6.5 14.1 1.4 1 0 0 1 1 1 0 Chorion family 2 YebO PF13974.6 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_3 - 0.037 14.1 0.7 0.048 13.7 0.7 1.1 1 0 0 1 1 1 0 YebO-like protein DUF2992 PF11208.8 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_3 - 5.2 7.3 12.6 6.3 7.0 12.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) DUF4611 PF15387.6 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.0023 18.1 7.9 0.0037 17.4 7.9 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4611) Bd3614-deam PF14439.6 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.013 15.6 0.1 0.015 15.4 0.1 1.1 1 0 0 1 1 1 0 Bd3614-like deaminase DUF2457 PF10446.9 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.014 14.5 12.2 0.016 14.4 12.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DNA_pol_phi PF04931.13 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.049 11.7 8.5 0.054 11.6 8.5 1.2 1 0 0 1 1 1 0 DNA polymerase phi RXT2_N PF08595.11 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.062 13.3 2.4 0.071 13.1 2.4 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal GCIP PF13324.6 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.066 12.8 5.7 0.076 12.6 5.7 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting PI3K_1B_p101 PF10486.9 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.077 10.8 1.5 0.077 10.8 1.5 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit CDC45 PF02724.14 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.087 11.1 6.0 0.086 11.1 6.0 1.0 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.095 10.9 8.5 0.096 10.9 8.5 1.0 1 0 0 1 1 1 0 Nop14-like family FAM176 PF14851.6 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.096 12.3 3.3 0.12 12.0 3.3 1.2 1 0 0 1 1 1 0 FAM176 family DUF1840 PF08895.11 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.097 13.0 0.6 0.15 12.4 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) CobT PF06213.12 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.14 11.5 9.2 0.17 11.3 9.2 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Cwf_Cwc_15 PF04889.12 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.33 10.7 10.8 0.5 10.1 10.8 1.3 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein CENP-B_dimeris PF09026.10 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 0.34 11.3 17.6 0.52 10.7 17.6 1.3 1 0 0 1 1 1 0 Centromere protein B dimerisation domain NOA36 PF06524.12 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 1 8.6 12.6 1.2 8.3 12.6 1.1 1 0 0 1 1 1 0 NOA36 protein PBP1_TM PF14812.6 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 2.3 8.7 12.9 0.12 12.7 7.5 1.7 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal RRN3 PF05327.11 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 3 6.3 7.0 3.1 6.3 7.0 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Dicty_REP PF05086.12 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 3.7 5.4 10.4 4.3 5.2 10.4 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein LAT PF15234.6 NODE_51434_length_352_cov_117.154574_g43522_i0forward_frame_2 - 4.9 6.8 15.7 12 5.6 15.8 1.6 1 1 0 1 1 1 0 Linker for activation of T-cells DUF2182 PF09948.9 NODE_51429_length_352_cov_185.006309_g43517_i0reverse_frame_2 - 0.026 14.4 0.4 0.031 14.2 0.4 1.2 1 0 0 1 1 1 0 Predicted metal-binding integral membrane protein (DUF2182) DUF1618 PF07762.14 NODE_51429_length_352_cov_185.006309_g43517_i0reverse_frame_2 - 0.033 14.8 0.1 0.04 14.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1618) Serinc PF03348.15 NODE_51427_length_352_cov_188.435331_g43515_i0reverse_frame_2 - 4.1e-18 65.5 0.1 4.8e-18 65.3 0.1 1.0 1 0 0 1 1 1 1 Serine incorporator (Serinc) DUF2985 PF11204.8 NODE_51427_length_352_cov_188.435331_g43515_i0reverse_frame_2 - 0.00081 19.5 2.2 0.0011 19.1 2.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2985) DUF4873 PF16170.5 NODE_51424_length_352_cov_251.517350_g43512_i0reverse_frame_3 - 0.23 11.7 0.0 0.82 9.9 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4873) Thymopoietin PF08198.11 NODE_51424_length_352_cov_251.517350_g43512_i0reverse_frame_2 - 0.047 13.3 0.1 0.082 12.5 0.1 1.3 1 0 0 1 1 1 0 Thymopoietin protein RRM_1 PF00076.22 NODE_51420_length_352_cov_1402.470032_g43508_i0forward_frame_3 - 0.17 11.8 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TMEM138 PF14935.6 NODE_51419_length_353_cov_1.248428_g43507_i0reverse_frame_3 - 0.036 14.7 1.0 0.036 14.7 1.0 2.2 1 1 1 2 2 2 0 Transmembrane protein 138 DUF1201 PF06716.11 NODE_51419_length_353_cov_1.248428_g43507_i0forward_frame_2 - 0.00077 19.4 4.7 0.0011 18.9 4.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1201) HECT PF00632.25 NODE_51418_length_353_cov_1.371069_g43506_i0forward_frame_2 - 5.5e-27 95.1 0.0 5.8e-27 95.0 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Pkinase PF00069.25 NODE_51417_length_353_cov_1.490566_g43505_i0forward_frame_3 - 2.1e-11 43.7 0.0 2.6e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_51417_length_353_cov_1.490566_g43505_i0forward_frame_3 - 0.00013 21.3 0.0 0.00018 20.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_51417_length_353_cov_1.490566_g43505_i0forward_frame_3 - 0.067 12.5 0.0 0.083 12.2 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Arrestin_N PF00339.29 NODE_51414_length_353_cov_1.622642_g43502_i0forward_frame_2 - 4.3e-06 26.8 0.0 5.4e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain PP2C PF00481.21 NODE_51412_length_353_cov_1.694969_g43500_i0forward_frame_3 - 2.3e-22 79.9 0.0 2.6e-22 79.7 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SH PF01445.17 NODE_51409_length_353_cov_2.006289_g43497_i0reverse_frame_3 - 0.19 11.8 2.2 0.24 11.4 0.1 2.2 3 0 0 3 3 3 0 Viral small hydrophobic protein TB PF00683.17 NODE_51409_length_353_cov_2.006289_g43497_i0reverse_frame_2 - 0.019 14.7 1.0 0.032 14.0 1.0 1.5 1 0 0 1 1 1 0 TB domain DUF4728 PF15860.5 NODE_51409_length_353_cov_2.006289_g43497_i0reverse_frame_2 - 0.14 12.9 3.1 2 9.1 0.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4728) UPF0270 PF06794.12 NODE_51407_length_353_cov_2.380503_g43495_i0reverse_frame_3 - 0.001 19.1 0.0 0.0017 18.4 0.0 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0270) Oxidored_molyb PF00174.19 NODE_51406_length_353_cov_2.393082_g43494_i0forward_frame_2 - 0.2 11.3 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain AA_permease PF00324.21 NODE_51405_length_353_cov_2.440252_g43493_i0forward_frame_3 - 2.5e-33 115.4 4.6 2.7e-33 115.3 4.6 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_51405_length_353_cov_2.440252_g43493_i0forward_frame_3 - 5.7e-08 32.0 5.3 5.8e-08 32.0 5.3 1.0 1 0 0 1 1 1 1 Amino acid permease Frizzled PF01534.17 NODE_51405_length_353_cov_2.440252_g43493_i0forward_frame_3 - 0.035 13.1 0.0 0.043 12.9 0.0 1.1 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region tRNA_synthFbeta PF17759.1 NODE_51402_length_353_cov_2.559748_g43490_i0forward_frame_3 - 6.5e-30 104.2 0.0 7e-30 104.1 0.0 1.0 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain Peptidase_M32 PF02074.15 NODE_51402_length_353_cov_2.559748_g43490_i0forward_frame_3 - 0.22 10.2 0.0 0.27 10.0 0.0 1.2 1 1 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase MFS_1 PF07690.16 NODE_51399_length_353_cov_2.823899_g43487_i0reverse_frame_2 - 0.0022 17.0 0.5 0.0024 16.9 0.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 NODE_51399_length_353_cov_2.823899_g43487_i0reverse_frame_2 - 0.0083 14.7 0.3 0.0086 14.7 0.3 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein DUF1652 PF07865.11 NODE_51399_length_353_cov_2.823899_g43487_i0forward_frame_3 - 0.056 13.3 0.4 0.088 12.6 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) UPF0139 PF03669.13 NODE_51395_length_353_cov_3.182390_g43483_i0reverse_frame_3 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) Herpes_UL31 PF02718.14 NODE_51395_length_353_cov_3.182390_g43483_i0reverse_frame_2 - 0.0071 15.4 0.4 0.008 15.2 0.4 1.1 1 0 0 1 1 1 1 Herpesvirus UL31-like protein Bac_GH3_C PF18034.1 NODE_51392_length_353_cov_3.349057_g43480_i0reverse_frame_3 - 0.00096 18.9 0.0 0.0012 18.5 0.0 1.2 1 0 0 1 1 1 1 Bacterial Glycosyl hydrolase family 3 C-terminal domain ADSL_C PF10397.9 NODE_51392_length_353_cov_3.349057_g43480_i0reverse_frame_3 - 0.0096 16.5 0.1 0.016 15.8 0.1 1.3 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus ABC_ATPase PF09818.9 NODE_51392_length_353_cov_3.349057_g43480_i0reverse_frame_3 - 0.024 13.4 1.3 0.027 13.3 1.3 1.0 1 0 0 1 1 1 0 Predicted ATPase of the ABC class RF-1 PF00472.20 NODE_51392_length_353_cov_3.349057_g43480_i0reverse_frame_3 - 0.075 13.0 4.2 0.1 12.5 4.1 1.3 1 1 0 1 1 1 0 RF-1 domain DUF2615 PF11027.8 NODE_51387_length_353_cov_22.965409_g43475_i0reverse_frame_2 - 0.1 12.8 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) DUF2615 PF11027.8 NODE_51386_length_353_cov_22.990566_g43474_i0reverse_frame_2 - 0.067 13.3 0.0 0.093 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) DUF1911 PF08929.10 NODE_51385_length_353_cov_29.704403_g43473_i0forward_frame_3 - 0.092 13.6 0.8 0.14 13.0 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1911) Topoisom_I_N PF02919.15 NODE_51385_length_353_cov_29.704403_g43473_i0forward_frame_3 - 0.26 10.8 12.5 0.025 14.1 7.6 1.6 1 1 1 2 2 2 0 Eukaryotic DNA topoisomerase I, DNA binding fragment DUF2691 PF10903.8 NODE_51384_length_353_cov_36.462264_g43472_i0reverse_frame_3 - 0.015 15.2 0.5 0.026 14.4 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2691) TyrRSs_C PF16714.5 NODE_51384_length_353_cov_36.462264_g43472_i0reverse_frame_3 - 0.047 13.5 0.3 0.075 12.8 0.2 1.4 1 1 0 1 1 1 0 Tyrosyl-tRNA synthetase C-terminal domain HXXEE PF13787.6 NODE_51384_length_353_cov_36.462264_g43472_i0forward_frame_2 - 2.3 9.1 6.3 3.3 8.6 6.3 1.2 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif BmKX PF09132.10 NODE_51374_length_353_cov_68.270440_g43462_i0reverse_frame_3 - 0.18 11.9 1.4 0.22 11.5 0.3 1.7 2 0 0 2 2 2 0 BmKX Megourin PF17560.2 NODE_51370_length_353_cov_75.783019_g43458_i0reverse_frame_2 - 0.024 14.9 2.8 0.27 11.5 0.1 2.3 2 0 0 2 2 2 0 Aphid Megourins TMEM219 PF14940.6 NODE_51370_length_353_cov_75.783019_g43458_i0forward_frame_2 - 0.054 13.1 1.9 0.064 12.8 1.9 1.1 1 0 0 1 1 1 0 Transmembrane 219 bZIP_1 PF00170.21 NODE_51368_length_353_cov_77.650943_g43456_i0reverse_frame_2 - 7.4 6.8 13.8 13 6.0 0.7 2.2 2 0 0 2 2 2 0 bZIP transcription factor Sororin PF09666.10 NODE_51366_length_353_cov_86.327044_g43454_i0forward_frame_3 - 0.037 14.3 0.6 0.052 13.8 0.6 1.4 1 1 0 1 1 1 0 Sororin protein Med30 PF11315.8 NODE_51360_length_353_cov_122.500000_g43448_i0forward_frame_2 - 0.035 14.3 0.0 0.044 14.0 0.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 30 RCC1_2 PF13540.6 NODE_51356_length_353_cov_150.864780_g43444_i0forward_frame_3 - 4e-05 23.3 6.7 0.23 11.3 0.1 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Calpain_III PF01067.22 NODE_51355_length_353_cov_154.336478_g43443_i0reverse_frame_2 - 0.0038 17.5 0.8 0.0052 17.1 0.8 1.1 1 0 0 1 1 1 1 Calpain large subunit, domain III Amj PF10997.8 NODE_51354_length_353_cov_158.396226_g43442_i0forward_frame_3 - 0.002 17.5 1.8 0.0024 17.2 1.8 1.1 1 0 0 1 1 1 1 Alternate to MurJ NHL PF01436.21 NODE_51351_length_353_cov_223.808176_g43439_i0reverse_frame_3 - 0.12 12.5 0.1 0.3 11.2 0.0 1.7 2 0 0 2 2 2 0 NHL repeat Otopetrin PF03189.13 NODE_51350_length_353_cov_232.584906_g43438_i0reverse_frame_3 - 0.024 13.4 0.2 0.026 13.4 0.2 1.0 1 0 0 1 1 1 0 Otopetrin Presenilin PF01080.17 NODE_51348_length_353_cov_274.056604_g43436_i0reverse_frame_2 - 2.4 6.8 5.3 2.6 6.7 5.3 1.0 1 0 0 1 1 1 0 Presenilin SR-25 PF10500.9 NODE_51348_length_353_cov_274.056604_g43436_i0reverse_frame_2 - 3.4 7.2 38.4 3.9 7.0 38.4 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Nodulin_late PF07127.11 NODE_51344_length_353_cov_983.308176_g43432_i0reverse_frame_3 - 2.7 8.4 6.9 3.4 8.1 5.1 2.3 1 1 0 1 1 1 0 Late nodulin protein DUF2461 PF09365.10 NODE_51344_length_353_cov_983.308176_g43432_i0forward_frame_3 - 0.042 13.8 0.0 0.05 13.5 0.0 1.0 1 0 0 1 1 1 0 Conserved hypothetical protein (DUF2461) DUF3890 PF13029.6 NODE_51342_length_353_cov_3455.393082_g43430_i0reverse_frame_2 - 0.01 16.3 0.0 0.016 15.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3890) zf-RING_2 PF13639.6 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 2.3e-12 47.0 11.0 2.3e-12 47.0 11.0 1.9 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 5.4e-08 32.5 10.9 8.4e-08 31.8 7.9 2.6 2 1 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 2.8e-06 27.1 9.6 2.8e-06 27.1 9.6 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 7.5e-06 26.1 12.6 7.5e-06 26.1 12.6 2.5 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 1.1e-05 25.2 11.2 1.1e-05 25.2 11.2 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 1.5e-05 24.7 8.6 1.5e-05 24.7 8.6 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 4e-05 23.5 9.9 4e-05 23.5 9.9 1.7 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 0.00012 22.1 5.1 0.00045 20.2 2.7 2.6 1 1 1 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 0.00072 19.6 3.7 0.0014 18.6 3.7 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 0.02 15.0 10.6 0.041 14.0 10.6 1.6 1 0 0 1 1 1 0 RING-variant domain Prok-RING_4 PF14447.6 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 0.061 13.2 7.7 0.12 12.2 7.7 1.6 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Pellino PF04710.14 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 0.18 10.4 4.2 0.42 9.2 3.6 1.8 1 1 1 2 2 2 0 Pellino zf-C3HC4_4 PF15227.6 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 0.25 11.5 11.6 0.24 11.6 8.2 2.7 2 1 1 3 3 3 0 zinc finger of C3HC4-type, RING Zn_ribbon_17 PF17120.5 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 0.35 10.5 8.1 0.63 9.7 8.1 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 0.86 9.8 10.4 18 5.6 10.6 2.4 1 1 1 2 2 2 0 FANCL C-terminal domain zf-RING_4 PF14570.6 NODE_51338_length_354_cov_1.394984_g43426_i0forward_frame_2 - 1.3 8.9 11.8 0.39 10.5 8.1 1.9 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Not1 PF04054.15 NODE_51337_length_354_cov_1.423197_g43425_i0forward_frame_2 - 0.68 8.8 3.8 0.87 8.4 0.1 2.0 1 1 1 2 2 2 0 CCR4-Not complex component, Not1 DUF4763 PF15960.5 NODE_51333_length_354_cov_1.617555_g43421_i0reverse_frame_3 - 0.083 12.2 2.7 0.1 11.9 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) ATG16 PF08614.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.0029 17.9 2.5 0.0039 17.5 2.5 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) CymA PF16941.5 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.026 13.7 0.1 0.03 13.5 0.1 1.2 1 0 0 1 1 1 0 Putative cyclodextrin porin ATP-synt_F6 PF05511.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.045 14.2 0.6 0.045 14.2 0.6 2.1 1 1 1 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 DUF724 PF05266.14 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.21 11.4 6.6 0.28 11.0 6.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF1640 PF07798.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.32 11.0 8.7 0.42 10.6 8.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) MRPL52 PF18699.1 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.33 11.2 5.6 0.092 12.9 1.8 1.9 1 1 1 2 2 2 0 Mitoribosomal protein mL52 P120R PF08062.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.35 11.3 0.3 0.35 11.3 0.3 2.3 2 0 0 2 2 2 0 P120R (NUC006) repeat DUF4407 PF14362.6 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 0.36 10.1 3.0 0.41 10.0 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Cnn_1N PF07989.11 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 1.4 9.1 9.5 0.63 10.2 6.2 2.2 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 DivIC PF04977.15 NODE_51332_length_354_cov_1.789969_g43420_i0reverse_frame_2 - 1.6 8.6 9.0 9.3 6.1 9.0 2.1 1 1 0 1 1 1 0 Septum formation initiator DUF2612 PF11041.8 NODE_51328_length_354_cov_1.902821_g43416_i0forward_frame_3 - 0.044 13.7 0.5 0.13 12.2 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2612) FAP PF07174.11 NODE_51327_length_354_cov_1.909091_g43415_i0reverse_frame_2 - 2.8 7.3 9.2 3.3 7.1 9.2 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_51327_length_354_cov_1.909091_g43415_i0forward_frame_3 - 0.018 15.0 2.2 0.024 14.6 2.2 1.1 1 0 0 1 1 1 0 Lamprin DUF1664 PF07889.12 NODE_51325_length_354_cov_2.034483_g43413_i0reverse_frame_3 - 0.00097 19.2 0.0 0.0012 18.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Nucleoporin_FG2 PF15967.5 NODE_51324_length_354_cov_2.094044_g43412_i0forward_frame_2 - 0.094 11.2 0.1 0.1 11.1 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin FG repeated region RXLR PF16810.5 NODE_51319_length_354_cov_2.222571_g43407_i0reverse_frame_3 - 2.9 8.3 7.2 5.4 7.4 7.2 1.4 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity DUF4131 PF13567.6 NODE_51319_length_354_cov_2.222571_g43407_i0forward_frame_3 - 0.19 11.4 4.2 0.21 11.3 4.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) PI3_PI4_kinase PF00454.27 NODE_51314_length_354_cov_2.404389_g43402_i0reverse_frame_3 - 3.6e-08 33.5 0.2 4.5e-08 33.2 0.2 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF1391 PF07151.12 NODE_51314_length_354_cov_2.404389_g43402_i0reverse_frame_3 - 0.053 13.4 0.1 0.085 12.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1391) UDPG_MGDP_dh PF00984.19 NODE_51309_length_354_cov_2.946708_g43397_i0reverse_frame_3 - 1.3e-28 99.0 0.0 1.6e-28 98.8 0.0 1.1 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain ATP-synt_G PF04718.15 NODE_51307_length_354_cov_3.025078_g43395_i0reverse_frame_2 - 0.021 15.6 0.3 0.026 15.3 0.3 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase g subunit PNGaseA PF12222.8 NODE_51305_length_354_cov_3.338558_g43393_i0forward_frame_2 - 2.4 6.9 8.2 2.7 6.8 8.2 1.1 1 0 0 1 1 1 0 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A O-antigen_lig PF13425.6 NODE_51305_length_354_cov_3.338558_g43393_i0forward_frame_2 - 2.4 6.8 6.3 2.6 6.8 6.3 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein FAD_binding_2 PF00890.24 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 8.8e-08 31.6 0.5 1e-07 31.4 0.5 1.1 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 3.5e-05 23.2 0.1 4.7e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.00015 21.1 0.6 0.00021 20.7 0.6 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.0066 15.6 0.9 0.0088 15.2 0.9 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.013 14.2 1.4 0.018 13.8 1.4 1.2 1 0 0 1 1 1 0 HI0933-like protein Lycopene_cycl PF05834.12 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.026 13.6 0.4 0.033 13.2 0.4 1.1 1 0 0 1 1 1 0 Lycopene cyclase protein DAO PF01266.24 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.053 13.1 0.1 0.076 12.6 0.1 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_oxidored PF12831.7 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.21 10.9 3.4 0.27 10.6 3.4 1.1 1 0 0 1 1 1 0 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 NODE_51304_length_354_cov_3.510972_g43392_i0forward_frame_3 - 0.21 10.8 2.6 0.29 10.3 2.6 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Mucin PF01456.17 NODE_51302_length_354_cov_4.000000_g43390_i0reverse_frame_3 - 0.0087 16.1 51.3 0.013 15.4 51.3 1.3 1 0 0 1 1 1 1 Mucin-like glycoprotein MGC-24 PF05283.11 NODE_51302_length_354_cov_4.000000_g43390_i0reverse_frame_3 - 1 9.8 23.2 1.3 9.4 23.2 1.2 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin FSA_C PF10479.9 NODE_51302_length_354_cov_4.000000_g43390_i0reverse_frame_3 - 8.7 4.3 24.2 9.3 4.2 24.2 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF805 PF05656.14 NODE_51302_length_354_cov_4.000000_g43390_i0forward_frame_3 - 3.5 8.1 11.1 4.5 7.7 11.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF805) Transformer PF06495.11 NODE_51302_length_354_cov_4.000000_g43390_i0forward_frame_2 - 0.26 11.4 17.0 0.3 11.2 17.0 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein RSB_motif PF16294.5 NODE_51302_length_354_cov_4.000000_g43390_i0forward_frame_2 - 2.3 8.5 7.6 3 8.2 7.6 1.1 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif Lentivirus_VIF PF05851.11 NODE_51296_length_354_cov_52.946708_g43384_i0reverse_frame_3 - 0.044 12.7 0.2 0.049 12.5 0.2 1.1 1 0 0 1 1 1 0 Lentivirus virion infectivity factor (VIF) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks225.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks225.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks225.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks225.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cytochrome_CBB3 PF13442.6 NODE_51292_length_354_cov_66.366771_g43380_i0reverse_frame_2 - 0.053 13.8 0.1 0.084 13.2 0.1 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III Ku_N PF03731.15 NODE_51290_length_354_cov_69.009404_g43378_i0forward_frame_2 - 0.18 11.5 0.1 0.19 11.4 0.1 1.1 1 0 0 1 1 1 0 Ku70/Ku80 N-terminal alpha/beta domain BAG6 PF12057.8 NODE_51284_length_354_cov_80.341693_g43372_i0forward_frame_2 - 0.48 10.1 2.8 3.3 7.4 0.2 2.1 1 1 1 2 2 2 0 BCL2-associated athanogene 6 Toxin_24 PF08094.11 NODE_51277_length_354_cov_87.369906_g43365_i0reverse_frame_2 - 0.018 14.9 2.3 0.018 14.9 2.3 2.2 2 1 0 2 2 2 0 Conotoxin TVIIA/GS family Dimer_Tnp_hAT PF05699.14 NODE_51276_length_354_cov_87.746082_g43364_i0reverse_frame_2 - 0.095 12.5 0.1 0.13 12.0 0.1 1.3 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region Pur_DNA_glyco PF02245.16 NODE_51273_length_354_cov_109.084639_g43361_i0forward_frame_3 - 0.19 11.2 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 Methylpurine-DNA glycosylase (MPG) TCR PF03638.15 NODE_51265_length_354_cov_219.827586_g43353_i0reverse_frame_2 - 1.4 9.3 16.3 1.4 9.3 2.2 2.4 2 0 0 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain Cas_Csm6 PF09659.10 NODE_51265_length_354_cov_219.827586_g43353_i0forward_frame_3 - 0.034 12.9 0.1 0.042 12.6 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csm6) CIMR PF00878.18 NODE_51261_length_354_cov_333.601881_g43349_i0reverse_frame_3 - 0.014 15.4 0.2 5.4 7.1 0.0 2.1 2 0 0 2 2 2 0 Cation-independent mannose-6-phosphate receptor repeat PIH1 PF08190.12 NODE_51261_length_354_cov_333.601881_g43349_i0reverse_frame_3 - 0.047 13.2 4.7 1.7 8.0 0.6 2.2 1 1 1 2 2 2 0 PIH1 N-terminal domain CIMR PF00878.18 NODE_51261_length_354_cov_333.601881_g43349_i0reverse_frame_2 - 0.055 13.5 0.2 8.5 6.4 0.0 2.2 2 0 0 2 2 2 0 Cation-independent mannose-6-phosphate receptor repeat PIH1 PF08190.12 NODE_51261_length_354_cov_333.601881_g43349_i0reverse_frame_2 - 1.7 8.1 9.7 2.5 7.5 0.7 2.8 1 1 2 3 3 3 0 PIH1 N-terminal domain DUF1599 PF07659.11 NODE_51261_length_354_cov_333.601881_g43349_i0forward_frame_3 - 0.16 12.4 0.0 18 5.9 0.0 2.3 2 0 0 2 2 2 0 Nucleotide modification associated domain 1 ATPase_gene1 PF09527.10 NODE_51261_length_354_cov_333.601881_g43349_i0forward_frame_2 - 0.1 12.8 0.4 7.4 6.8 0.1 2.2 2 0 0 2 2 2 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter CX9C PF16860.5 NODE_51259_length_354_cov_467.664577_g43347_i0reverse_frame_2 - 0.035 14.1 0.0 0.067 13.2 0.0 1.4 1 0 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Gemini_C4 PF01492.17 NODE_51258_length_354_cov_469.257053_g41382_i1forward_frame_3 - 0.055 13.4 0.0 0.071 13.0 0.0 1.3 1 0 0 1 1 1 0 Geminivirus C4 protein MRP_L53 PF10780.9 NODE_51256_length_354_cov_662.282132_g39392_i1forward_frame_2 - 0.031 14.4 0.2 0.059 13.6 0.1 1.6 2 0 0 2 2 2 0 39S ribosomal protein L53/MRP-L53 DUF1664 PF07889.12 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.0019 18.2 1.1 0.0037 17.3 1.0 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF1664) DUF1690 PF07956.11 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.024 15.0 0.9 0.031 14.7 0.9 1.3 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF948 PF06103.11 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.035 14.4 0.9 0.51 10.6 0.1 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Prefoldin PF02996.17 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.037 13.9 3.3 6.7 6.7 0.2 2.7 1 1 1 3 3 3 0 Prefoldin subunit NPV_P10 PF05531.12 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.041 14.4 2.2 0.075 13.5 0.8 2.0 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein Laminin_II PF06009.12 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.065 13.3 1.7 0.15 12.1 1.7 1.7 1 1 0 1 1 1 0 Laminin Domain II BLOC1_2 PF10046.9 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.072 13.4 6.8 0.65 10.3 5.6 2.3 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 XhlA PF10779.9 NODE_51255_length_354_cov_1000.598746_g43345_i0forward_frame_3 - 0.09 13.0 4.0 0.12 12.5 0.7 2.2 2 0 0 2 2 2 0 Haemolysin XhlA Microtub_bd PF16796.5 NODE_51254_length_354_cov_1238.536050_g43344_i0forward_frame_3 - 0.079 12.9 3.8 0.12 12.3 3.8 1.5 1 1 0 1 1 1 0 Microtubule binding Sugar_tr PF00083.24 ORF9832 - 1.5e-09 37.2 5.3 1.5e-09 37.2 5.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF9832 - 1.4e-05 24.2 2.2 1.6e-05 24.0 2.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4656 PF15551.6 ORF97341 - 0.27 10.7 0.6 0.31 10.5 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) CedA PF10729.9 ORF97245 - 0.031 14.1 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 Cell division activator CedA Cpn60_TCP1 PF00118.24 ORF96843 - 0.1 11.2 0.1 0.12 11.0 0.1 1.1 1 0 0 1 1 1 0 TCP-1/cpn60 chaperonin family FAM24 PF15193.6 ORF96422 - 0.078 13.8 0.4 0.11 13.3 0.4 1.4 1 1 0 1 1 1 0 FAM24 family Colicin-DNase PF12639.7 ORF93920 - 0.018 15.8 0.1 0.023 15.5 0.1 1.1 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin UspB PF10625.9 ORF93920 - 0.18 11.8 0.4 0.25 11.3 0.4 1.2 1 0 0 1 1 1 0 Universal stress protein B (UspB) cNMP_binding PF00027.29 ORF92356 - 3.6e-11 43.0 0.0 1.5e-08 34.6 0.0 2.1 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain TMCO5 PF14992.6 ORF91997 - 0.044 13.4 9.6 0.054 13.1 9.6 1.1 1 0 0 1 1 1 0 TMCO5 family Jnk-SapK_ap_N PF09744.9 ORF91997 - 0.063 13.5 8.5 0.081 13.1 8.5 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 UPF0184 PF03670.13 ORF91997 - 0.16 12.3 5.1 0.077 13.4 2.9 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) Prominin PF05478.11 ORF91997 - 0.22 9.5 6.6 0.25 9.3 6.6 1.0 1 0 0 1 1 1 0 Prominin UPF0449 PF15136.6 ORF91997 - 0.76 10.3 9.9 1.4 9.4 9.9 1.5 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 LMBR1 PF04791.16 ORF91997 - 0.8 8.5 7.1 0.89 8.4 7.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ly49 PF08391.10 ORF91997 - 2 8.8 9.5 3 8.2 9.5 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region TMF_DNA_bd PF12329.8 ORF91997 - 2.1 8.4 9.5 2.7 8.1 8.7 1.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Allantoicase PF03561.15 ORF88012 - 0.07 13.1 0.1 0.07 13.1 0.1 1.1 1 0 0 1 1 1 0 Allantoicase repeat adh_short PF00106.25 ORF87169 - 1.9e-09 37.3 0.1 4.2e-09 36.1 0.0 1.6 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF87169 - 8.2e-06 25.5 0.1 1.1e-05 25.2 0.1 1.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase ADPrib_exo_Tox PF03496.14 ORF86584 - 0.046 13.1 0.0 0.055 12.8 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosyltransferase exoenzyme DUF4860 PF16152.5 ORF86584 - 0.051 13.4 0.0 0.07 13.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4860) YgbA_NO PF11756.8 ORF85289 - 3.1e-39 133.6 3.0 3.7e-39 133.4 3.0 1.0 1 0 0 1 1 1 1 Nitrous oxide-stimulated promoter AFOR_C PF01314.18 ORF85289 - 0.097 11.7 0.3 0.097 11.7 0.3 1.1 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Ribosomal_L11 PF00298.19 ORF84263 - 0.28 11.7 3.2 3.8 8.1 3.2 2.2 1 1 0 1 1 1 0 Ribosomal protein L11, RNA binding domain DUF1719 PF08224.11 ORF82881 - 0.2 10.7 1.2 0.23 10.5 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) Cytochrome_C7 PF14522.6 ORF82649 - 0.011 15.8 0.5 0.02 14.9 0.5 1.4 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c DUF3836 PF12930.7 ORF82620 - 0.0098 15.6 2.3 0.014 15.2 2.3 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF3836) Me-amine-dh_L PF02975.14 ORF82620 - 0.017 15.6 0.7 0.024 15.1 0.7 1.2 1 0 0 1 1 1 0 Methylamine dehydrogenase, L chain FixS PF03597.15 ORF82620 - 0.13 12.0 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type Ribosomal_L11 PF00298.19 ORF82579 - 0.28 11.7 3.2 3.8 8.1 3.2 2.2 1 1 0 1 1 1 0 Ribosomal protein L11, RNA binding domain DUF4221 PF13970.6 ORF81866 - 0.12 11.9 0.3 0.17 11.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4221) Jiv90 PF14901.6 ORF81662 - 0.1 12.8 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Cleavage inducing molecular chaperone Integrase_Zn PF02022.19 ORF8031 - 0.02 14.8 0.1 0.02 14.8 0.1 1.7 2 0 0 2 2 2 0 Integrase Zinc binding domain MANEC PF07502.14 ORF80300 - 0.052 13.8 0.2 0.075 13.3 0.2 1.2 1 0 0 1 1 1 0 MANEC domain DUF3885 PF13021.6 ORF80300 - 0.086 13.0 0.1 2.8 8.1 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3885) V-set_2 PF15910.5 ORF79351 - 0.18 11.9 0.0 0.27 11.4 0.0 1.2 1 0 0 1 1 1 0 ICOS V-set domain Atg8 PF02991.16 ORF79008 - 4.8e-37 126.3 0.1 5.6e-37 126.1 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF79008 - 8.7e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Sa_NUDIX PF18167.1 ORF7843 - 0.021 14.6 0.1 0.027 14.3 0.1 1.2 1 0 0 1 1 1 0 SMODS-associated NUDIX domain Arg_decarbox_C PF17944.1 ORF7843 - 0.033 14.7 0.1 0.056 14.0 0.1 1.4 1 0 0 1 1 1 0 Arginine decarboxylase C-terminal helical extension DUF1104 PF06518.11 ORF7843 - 0.044 14.1 0.6 0.074 13.4 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) SSXT PF05030.12 ORF7843 - 0.096 12.3 1.7 0.15 11.7 1.7 1.3 1 0 0 1 1 1 0 SSXT protein (N-terminal region) FA_FANCE PF11510.8 ORF7843 - 0.11 11.9 0.0 0.19 11.0 0.0 1.4 2 0 0 2 2 2 0 Fanconi Anaemia group E protein FANCE GAF PF01590.26 ORF78326 - 0.0013 19.3 0.0 0.0018 18.9 0.0 1.2 1 0 0 1 1 1 1 GAF domain KR PF08659.10 ORF78326 - 0.1 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 KR domain DUF3624 PF12292.8 ORF77805 - 0.0077 16.6 0.3 0.013 15.9 0.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3624) Rimk_N PF18030.1 ORF76325 - 0.016 15.6 0.0 0.035 14.5 0.0 1.5 2 0 0 2 2 2 0 RimK PreATP-grasp domain TRA-1_regulated PF02343.16 ORF76032 - 0.041 13.9 0.3 0.067 13.3 0.0 1.5 2 0 0 2 2 2 0 TRA-1 regulated protein R03H10.4 DrsE PF02635.15 ORF75784 - 2.5e-23 82.7 0.0 2.8e-23 82.5 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family GET2 PF08690.10 ORF75306 - 5.3 6.6 11.0 5.9 6.5 11.0 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 Spc110_C PF18520.1 ORF74000 - 0.12 12.0 0.2 0.27 10.9 0.2 1.5 1 0 0 1 1 1 0 Spindle pole body component 110 C-terminal domain DUF2486 PF10667.9 ORF73709 - 0.013 15.8 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2486) FlaC_arch PF05377.11 ORF73268 - 0.0031 17.9 0.5 0.0064 16.9 0.5 1.6 1 0 0 1 1 1 1 Flagella accessory protein C (FlaC) Atg14 PF10186.9 ORF73268 - 0.0046 16.1 2.7 0.0054 15.9 2.7 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 RRF_GI PF12614.8 ORF73268 - 0.02 15.0 0.9 0.025 14.7 0.9 1.2 1 0 0 1 1 1 0 Ribosome recycling factor MIP-T3_C PF17749.1 ORF73268 - 0.032 14.2 2.7 0.04 13.9 2.7 1.2 1 0 0 1 1 1 0 Microtubule-binding protein MIP-T3 C-terminal region DivIC PF04977.15 ORF73268 - 0.035 13.9 1.5 0.04 13.7 0.3 1.7 1 1 1 2 2 2 0 Septum formation initiator DUF2203 PF09969.9 ORF73268 - 0.088 13.5 1.0 0.13 13.0 0.9 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF848 PF05852.11 ORF73268 - 0.11 12.6 1.8 0.13 12.4 1.8 1.1 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Abhydrolase_3 PF07859.13 ORF73169 - 0.00018 21.5 0.0 0.0002 21.3 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Zf_RING PF16744.5 ORF72702 - 0.055 13.6 0.1 0.1 12.7 0.1 1.5 1 1 0 1 1 1 0 KIAA1045 RING finger VirB3 PF05101.13 ORF72623 - 0.33 11.2 5.6 0.6 10.4 1.1 2.1 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein UNC-79 PF14776.6 ORF72415 - 0.14 10.8 0.3 0.17 10.6 0.3 1.0 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 Ocnus PF05005.15 ORF7229 - 2.5e-26 91.9 0.0 2.8e-26 91.7 0.0 1.1 1 0 0 1 1 1 1 Janus/Ocnus family (Ocnus) VWD PF00094.25 ORF7229 - 0.082 13.2 0.0 0.089 13.1 0.0 1.2 1 1 0 1 1 1 0 von Willebrand factor type D domain Baculo_LEF-10 PF07206.11 ORF7229 - 0.21 11.8 0.5 0.8 9.9 0.2 1.9 2 0 0 2 2 2 0 Baculovirus late expression factor 10 (LEF-10) DUF1719 PF08224.11 ORF70479 - 0.2 10.7 1.2 0.23 10.5 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) Cytochrome_C7 PF14522.6 ORF69618 - 0.011 15.8 0.5 0.02 14.9 0.5 1.4 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c DUF2113 PF09886.9 ORF6892 - 0.17 11.2 0.2 0.23 10.8 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2113) Vac14_Fig4_bd PF11916.8 ORF66945 - 0.12 12.0 0.3 0.15 11.7 0.3 1.2 1 0 0 1 1 1 0 Vacuolar protein 14 C-terminal Fig4p binding DUF1968 PF09291.10 ORF65416 - 0.024 14.7 2.9 0.61 10.2 0.6 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF1968) Shufflon_N PF04917.12 ORF65416 - 0.081 12.4 0.1 0.088 12.2 0.1 1.0 1 0 0 1 1 1 0 Bacterial shufflon protein, N-terminal constant region MRP-L27 PF09809.9 ORF65410 - 1.8e-09 37.4 0.0 2.2e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L27 DUF316 PF03761.15 ORF64859 - 0.061 12.9 0.1 0.093 12.3 0.1 1.3 1 1 0 1 1 1 0 Chymotrypsin family Peptidase-S1 LIN37 PF15306.6 ORF64859 - 0.17 12.1 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 LIN37 MORN PF02493.20 ORF64765 - 1.1e-14 53.3 4.5 0.00023 20.8 0.1 3.6 3 0 0 3 3 3 3 MORN repeat SCA7 PF08313.12 ORF63977 - 0.69 9.9 4.6 7.5 6.5 0.2 2.4 2 1 0 2 2 2 0 SCA7, zinc-binding domain Fibrillin_U_N PF18193.1 ORF63819 - 0.034 14.2 2.4 0.075 13.2 2.4 1.5 1 0 0 1 1 1 0 Fibrillin 1 unique N-terminal domain HRG PF16954.5 ORF63819 - 1.8 9.0 8.1 3.7 8.0 2.7 2.3 1 1 1 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene SERTA PF06031.13 ORF63452 - 0.24 11.1 0.7 1.5 8.6 0.2 2.1 2 0 0 2 2 2 0 SERTA motif TRA-1_regulated PF02343.16 ORF62807 - 0.041 13.9 0.3 0.067 13.3 0.0 1.5 2 0 0 2 2 2 0 TRA-1 regulated protein R03H10.4 TGBp3 PF02495.17 ORF62568 - 0.0048 16.5 0.2 0.014 15.1 0.2 1.8 1 0 0 1 1 1 1 Triple gene block 3 Herpes_LMP1 PF05297.11 ORF62568 - 1.2 8.2 6.5 1.5 8.0 6.5 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Tmemb_170 PF10190.9 ORF62262 - 0.022 15.1 0.0 0.026 14.9 0.0 1.2 1 0 0 1 1 1 0 Putative transmembrane protein 170 PARP PF00644.20 ORF61761 - 3.8e-27 95.1 0.0 4.2e-27 95.0 0.0 1.0 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Anoctamin PF04547.12 ORF61510 - 0.13 11.1 2.7 0.15 10.9 2.7 1.1 1 0 0 1 1 1 0 Calcium-activated chloride channel FA_desaturase PF00487.24 ORF61510 - 0.14 12.0 7.2 0.16 11.8 7.2 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2207 PF09972.9 ORF61510 - 0.33 9.6 8.3 0.35 9.6 8.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phage_integrase PF00589.22 ORF61286 - 7.2e-25 87.7 0.1 8.7e-25 87.5 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family Hydrolase PF00702.26 ORF61228 - 2e-06 28.2 0.0 2.4e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF61228 - 0.0003 20.6 0.1 0.00046 20.0 0.1 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF4781 PF16013.5 ORF61185 - 0.063 12.1 3.2 0.073 11.9 3.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) IL10 PF00726.17 ORF61095 - 0.069 12.7 0.2 0.095 12.2 0.2 1.2 1 0 0 1 1 1 0 Interleukin 10 ABC_tran PF00005.27 ORF61053 - 4.7e-09 36.9 0.0 7.6e-09 36.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF61053 - 7.9e-05 22.2 0.3 9.4e-05 21.9 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF5507 PF17612.2 ORF61053 - 0.06 13.1 0.1 0.081 12.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5507) EutK_C PF16365.5 ORF60971 - 0.016 15.2 0.3 0.033 14.2 0.0 1.6 2 0 0 2 2 2 0 Ethanolamine utilization protein EutK C-terminus Thr_dehydrat_C PF00585.18 ORF58924 - 3.9e-31 106.7 0.0 5.4e-28 96.6 0.0 2.0 2 0 0 2 2 2 2 C-terminal regulatory domain of Threonine dehydratase DUF4106 PF13388.6 ORF58894 - 0.28 10.4 0.3 0.31 10.2 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) SPT16 PF08644.11 ORF5794 - 0.042 14.0 0.1 0.049 13.8 0.1 1.1 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) LANC_like PF05147.13 ORF5794 - 0.076 11.6 0.1 0.09 11.3 0.1 1.1 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein Fibrillin_U_N PF18193.1 ORF57859 - 0.034 14.2 2.4 0.075 13.2 2.4 1.5 1 0 0 1 1 1 0 Fibrillin 1 unique N-terminal domain HRG PF16954.5 ORF57859 - 1.8 9.0 8.1 3.7 8.0 2.7 2.3 1 1 1 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene HSP33 PF01430.19 ORF57053 - 0.042 13.3 0.1 0.065 12.6 0.1 1.2 1 1 0 1 1 1 0 Hsp33 protein Borrelia_orfD PF02999.14 ORF5622 - 0.044 14.1 0.0 0.056 13.8 0.0 1.3 1 0 0 1 1 1 0 Borrelia orf-D family DUF2299 PF10061.9 ORF5622 - 0.063 13.0 0.1 0.063 13.0 0.1 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2299) Late_protein_L2 PF00513.18 ORF55782 - 0.049 12.6 0.0 0.052 12.6 0.0 1.0 1 0 0 1 1 1 0 Late Protein L2 DUF4187 PF13821.6 ORF53032 - 0.17 11.7 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) Ribosomal_L11 PF00298.19 ORF52087 - 0.28 11.7 3.2 3.8 8.1 3.2 2.2 1 1 0 1 1 1 0 Ribosomal protein L11, RNA binding domain DUF3959 PF13105.6 ORF51036 - 0.9 9.0 3.9 0.99 8.9 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Atg8 PF02991.16 ORF50430 - 4.8e-37 126.3 0.1 5.6e-37 126.1 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF50430 - 8.7e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 RCC1_2 PF13540.6 ORF49998 - 2.2e-09 36.9 6.9 0.00025 20.7 0.3 3.3 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF49998 - 0.0019 18.3 0.7 13 5.9 0.1 3.0 2 1 0 3 3 3 3 Uncharacterised ACR, YagE family COG1723 PheRS_DBD2 PF18554.1 ORF49998 - 3.2 7.8 5.1 6.1 6.9 0.3 2.6 3 0 0 3 3 3 0 PheRS DNA binding domain 2 zf-RING_UBOX PF13445.6 ORF49573 - 1.1e-08 35.0 10.5 1.9e-08 34.2 10.5 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF49573 - 3.1e-07 30.2 6.7 4.9e-07 29.5 6.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF49573 - 6.7e-07 29.5 7.6 9.3e-07 29.1 7.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF49573 - 8.7e-07 28.8 6.7 1.5e-06 28.1 6.7 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF49573 - 8.4e-06 25.5 7.8 1.9e-05 24.4 7.8 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF49573 - 0.00012 21.9 6.1 0.00023 21.0 6.1 1.6 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF49573 - 0.00025 21.1 9.7 0.0006 19.9 9.7 1.7 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF49573 - 0.0055 16.5 9.9 0.011 15.5 3.2 2.3 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 ORF49573 - 0.013 15.3 5.8 0.023 14.5 5.8 1.5 1 0 0 1 1 1 0 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF49573 - 0.082 13.0 2.1 0.11 12.5 2.1 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Binary_toxB PF03495.14 ORF49573 - 0.13 12.4 0.1 0.2 11.9 0.1 1.3 1 0 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain CshA_NR2 PF18651.1 ORF49531 - 0.061 12.5 0.0 0.067 12.4 0.0 1.0 1 0 0 1 1 1 0 Surface adhesin CshA non-repetitive domain 2 HTH_5 PF01022.20 ORF48924 - 2.3e-17 62.6 2.2 3.9e-17 61.8 2.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 ORF48924 - 3.5e-10 39.8 0.3 5.6e-10 39.1 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 ORF48924 - 0.0034 17.4 0.1 0.0069 16.4 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn helix HTH_24 PF13412.6 ORF48924 - 0.024 14.2 0.2 0.053 13.1 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 ORF48924 - 0.035 14.6 0.0 0.074 13.6 0.0 1.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain MarR_2 PF12802.7 ORF48924 - 0.092 12.7 0.2 0.24 11.3 0.1 1.7 2 0 0 2 2 2 0 MarR family Cir_Bir_Yir PF06022.11 ORF46371 - 0.0051 16.3 1.2 0.0072 15.8 1.2 1.2 1 0 0 1 1 1 1 Plasmodium variant antigen protein Cir/Yir/Bir DUF3810 PF12725.7 ORF46371 - 3.6 6.8 9.7 5.4 6.3 9.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) XTBD PF11952.8 ORF46371 - 8.2 6.3 6.4 11 5.9 6.0 1.4 1 1 0 1 1 1 0 XRN-Two Binding Domain, XTBD LuxE PF04443.12 ORF46186 - 0.25 10.3 0.3 0.29 10.1 0.3 1.1 1 0 0 1 1 1 0 Acyl-protein synthetase, LuxE VirB3 PF05101.13 ORF44255 - 0.33 11.2 5.6 0.6 10.4 1.1 2.1 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein ExoD PF06055.12 ORF43629 - 0.092 12.1 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD SepA PF17080.5 ORF43217 - 0.93 9.9 11.6 0.5 10.7 2.2 2.1 2 0 0 2 2 2 0 Multidrug Resistance efflux pump GSCFA PF08885.11 ORF42641 - 0.019 14.6 0.1 0.021 14.5 0.1 1.1 1 0 0 1 1 1 0 GSCFA family DUF4793 PF16041.5 ORF40437 - 0.082 13.1 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4793) TRCF PF03461.15 ORF39213 - 0.0081 16.5 2.4 0.0081 16.5 2.4 2.2 1 1 1 2 2 2 1 TRCF domain Ctr PF04145.15 ORF38940 - 0.13 12.9 0.1 0.14 12.8 0.1 1.1 1 0 0 1 1 1 0 Ctr copper transporter family DUF2457 PF10446.9 ORF38940 - 0.32 10.1 4.2 0.33 10.1 4.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Aa_trans PF01490.18 ORF38575 - 4.6e-25 88.2 5.3 5.4e-25 87.9 5.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein FAST_1 PF06743.15 ORF38575 - 0.01 15.7 0.5 0.024 14.6 0.5 1.7 1 1 0 1 1 1 0 FAST kinase-like protein, subdomain 1 DUF202 PF02656.15 ORF38575 - 0.12 12.8 0.2 0.22 12.0 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF202) Prolamin_like PF05617.11 ORF38278 - 0.034 14.3 0.2 0.21 11.8 0.0 2.1 2 1 0 2 2 2 0 Prolamin-like PS-DH PF14765.6 ORF37911 - 1.8e-06 27.4 0.1 2.8e-06 26.8 0.0 1.3 1 1 0 1 1 1 1 Polyketide synthase dehydratase TRA-1_regulated PF02343.16 ORF371 - 0.041 13.9 0.3 0.067 13.3 0.0 1.5 2 0 0 2 2 2 0 TRA-1 regulated protein R03H10.4 ATX_III PF08098.11 ORF36370 - 0.39 10.8 10.7 1.2 9.2 0.3 2.9 3 0 0 3 3 3 0 Anemonia sulcata toxin III family Rapsyn_N PF10579.9 ORF36366 - 0.11 12.6 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Rapsyn N-terminal myristoylation and linker region Chloroa_b-bind PF00504.21 ORF36287 - 3.7e-10 40.6 0.2 4.4e-10 40.3 0.2 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein pKID PF02173.17 ORF35194 - 0.053 13.0 1.0 0.25 10.9 0.2 2.3 2 0 0 2 2 2 0 pKID domain DUF2083 PF09856.9 ORF3505 - 0.047 13.5 0.0 0.047 13.5 0.0 1.2 1 0 0 1 1 1 0 Predicted transcriptional regulator (DUF2083) DUF4435 PF14491.6 ORF34752 - 0.015 15.2 4.5 0.017 15.0 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) TTKRSYEDQ PF10212.9 ORF34752 - 0.29 10.1 8.9 0.31 10.0 8.9 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein Peptidase_S49_N PF08496.10 ORF34752 - 0.44 10.6 9.8 0.5 10.4 9.8 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF1764 PF08576.10 ORF34752 - 6.6 7.7 11.3 7.7 7.5 10.9 1.4 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF1764) LAX PF15681.5 ORF34142 - 0.13 11.1 0.1 0.15 10.9 0.1 1.1 1 0 0 1 1 1 0 Lymphocyte activation family X GST_N PF02798.20 ORF31607 - 1.8e-12 47.4 0.0 2.7e-12 46.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF31607 - 1.2e-05 25.6 0.0 1.7e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF31607 - 0.039 14.3 0.0 0.055 13.8 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Lipoprotein_7 PF01540.16 ORF30314 - 0.0041 16.5 3.1 0.0042 16.4 3.1 1.2 1 0 0 1 1 1 1 Adhesin lipoprotein DUF725 PF05267.12 ORF30314 - 0.0053 16.7 3.8 0.0069 16.4 3.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF725) DUF4200 PF13863.6 ORF30314 - 0.0082 16.5 6.8 0.012 16.0 6.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) Tropomyosin_1 PF12718.7 ORF30314 - 0.0091 16.2 4.9 0.011 15.9 4.9 1.2 1 0 0 1 1 1 1 Tropomyosin like Laminin_II PF06009.12 ORF30314 - 0.017 15.2 2.1 0.02 14.9 2.1 1.1 1 0 0 1 1 1 0 Laminin Domain II Tho2 PF11262.8 ORF30314 - 0.044 13.0 3.6 0.054 12.7 3.6 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 HMMR_N PF15905.5 ORF30314 - 0.075 12.5 6.0 0.079 12.4 6.0 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF1664 PF07889.12 ORF30314 - 0.23 11.5 5.1 0.3 11.1 4.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) LMBR1 PF04791.16 ORF30314 - 0.33 9.8 2.0 0.36 9.7 2.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DivIC PF04977.15 ORF30314 - 1.4 8.7 6.3 2.6 7.9 3.4 2.2 1 1 1 2 2 2 0 Septum formation initiator RSV_NS2 PF03113.14 ORF30128 - 0.12 12.4 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Respiratory synctial virus non-structural protein NS2 DUF4051 PF13260.6 ORF30128 - 2.5 7.9 7.7 1.3 8.8 0.3 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF4051) PROL5-SMR PF15621.6 ORF30085 - 0.011 16.3 0.1 0.013 16.0 0.1 1.2 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Atg8 PF02991.16 ORF29906 - 1.7e-29 102.1 0.1 1.9e-29 101.9 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF29906 - 1.2e-06 28.8 0.1 1.5e-06 28.5 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 DUF3302 PF11742.8 ORF29348 - 0.013 15.6 0.4 0.1 12.7 0.1 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3302) TPR_1 PF00515.28 ORF29297 - 1.4e-10 40.5 4.4 1.2e-05 24.9 0.2 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF29297 - 3.6e-09 36.0 0.6 3.9e-05 23.4 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF29297 - 1.2e-06 28.1 0.2 2e-06 27.4 0.2 1.4 1 0 0 1 1 1 1 TPR repeat ANAPC3 PF12895.7 ORF29297 - 3.1e-06 27.3 0.4 4.4e-06 26.8 0.4 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.6 ORF29297 - 1.5e-05 24.9 3.6 0.00058 19.9 0.3 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF29297 - 6.8e-05 23.3 0.0 0.0001 22.7 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF29297 - 0.00014 22.0 0.2 0.00087 19.5 0.1 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF29297 - 0.00039 21.0 0.0 0.0005 20.7 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF29297 - 0.0039 17.5 0.0 0.54 10.6 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF29297 - 0.033 14.8 0.1 2.3 9.0 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF29297 - 0.081 13.0 0.1 0.44 10.7 0.0 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat ANAPC8 PF04049.13 ORF29297 - 0.31 11.1 2.9 4.1 7.4 2.9 2.1 1 1 0 1 1 1 0 Anaphase promoting complex subunit 8 / Cdc23 Glyco_hydro_57 PF03065.15 ORF26758 - 0.12 11.6 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 57 DER1 PF04511.15 ORF26758 - 0.17 11.8 4.0 0.18 11.7 4.0 1.1 1 0 0 1 1 1 0 Der1-like family TMEM247 PF15444.6 ORF26758 - 0.89 9.6 5.6 0.31 11.1 1.8 1.8 1 1 1 2 2 2 0 Transmembrane protein 247 Tnp_zf-ribbon_2 PF13842.6 ORF26560 - 1.9 9.4 0.1 1.9 9.4 0.1 3.0 3 0 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon Whib PF02467.16 ORF26560 - 7 7.3 8.4 17 6.1 0.1 2.5 2 1 0 2 2 2 0 Transcription factor WhiB UL41A PF17591.2 ORF26440 - 5.8 7.1 6.6 21 5.3 0.1 2.3 1 1 0 2 2 2 0 Herpesvirus UL41A DLIC PF05783.11 ORF26158 - 0.1 11.4 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) dCMP_cyt_deam_1 PF00383.23 ORF25509 - 0.44 10.4 5.9 1.4 8.8 0.2 2.8 2 1 1 3 3 3 0 Cytidine and deoxycytidylate deaminase zinc-binding region GPR15L PF15854.5 ORF25509 - 3.1 8.1 13.9 0.89 9.8 5.8 2.3 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 LAGLIDADG_2 PF03161.13 ORF25050 - 0.018 15.1 0.0 0.11 12.5 0.0 1.9 1 1 1 2 2 2 0 LAGLIDADG DNA endonuclease family Membralin PF09746.9 ORF23789 - 0.23 10.5 7.0 0.21 10.6 0.7 2.0 1 1 1 2 2 2 0 Tumour-associated protein DIX PF00778.17 ORF23602 - 4.7e-12 45.6 0.3 6.6e-12 45.1 0.3 1.2 1 0 0 1 1 1 1 DIX domain Mac-1 PF09028.10 ORF23357 - 0.1 11.6 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Mac 1 zf-C3HC4 PF00097.25 ORF22608 - 0.0037 17.1 0.8 0.0076 16.1 0.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF22608 - 0.024 14.4 2.0 0.024 14.4 2.0 1.9 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) CcmD PF04995.14 ORF22608 - 0.21 11.7 0.5 0.43 10.7 0.5 1.5 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) DUF4191 PF13829.6 ORF22608 - 0.76 9.1 1.9 0.96 8.7 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) zf-RING_5 PF14634.6 ORF22608 - 0.83 9.7 7.0 0.18 11.8 1.9 2.1 2 0 0 2 2 2 0 zinc-RING finger domain v110 PF01639.17 ORF22445 - 0.069 13.0 0.1 0.096 12.6 0.1 1.3 1 0 0 1 1 1 0 Viral family 110 SIT PF15330.6 ORF22023 - 0.097 13.1 0.4 0.14 12.6 0.4 1.4 1 1 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT BCNT PF07572.12 ORF20260 - 1.9e-18 66.3 2.6 1.9e-18 66.3 2.6 1.7 2 0 0 2 2 2 1 Bucentaur or craniofacial development BLOC1_2 PF10046.9 ORF20260 - 0.00079 19.7 1.5 0.00079 19.7 1.5 1.9 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sterile PF03015.19 ORF20260 - 0.082 13.1 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Male sterility protein TMF_DNA_bd PF12329.8 ORF20260 - 0.27 11.2 13.6 0.061 13.3 6.5 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding SPOB_ab PF14682.6 ORF19834 - 0.017 15.2 1.3 0.021 14.9 0.9 1.5 1 1 0 1 1 1 0 Sporulation initiation phospho-transferase B, C-terminal DUF1866 PF08952.11 ORF19834 - 0.085 12.7 1.0 0.13 12.1 1.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1866) DnaB_C PF03796.15 ORF19834 - 0.14 11.5 3.7 0.15 11.3 3.7 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain Herpes_pp85 PF04637.12 ORF19315 - 4.2 5.7 7.1 5 5.4 7.1 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF952 PF06108.12 ORF19239 - 0.0024 17.8 0.1 0.0031 17.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF952) Varsurf_PPLC PF03490.13 ORF18886 - 0.056 13.4 1.5 2.4 8.2 0.7 2.3 2 0 0 2 2 2 0 Variant-surface-glycoprotein phospholipase C NifU PF01106.17 ORF18886 - 0.16 12.1 0.6 15 5.8 0.1 2.2 2 0 0 2 2 2 0 NifU-like domain Pkinase PF00069.25 ORF18696 - 4.7e-08 32.7 0.7 9.2e-08 31.8 0.7 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18696 - 0.00047 19.5 0.1 0.00053 19.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF18696 - 0.11 11.9 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Response_reg PF00072.24 ORF18488 - 1.5e-06 28.3 0.0 1.8e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain PG_binding_2 PF08823.11 ORF18409 - 1.3 9.4 3.1 63 4.0 3.1 2.2 1 1 0 1 1 1 0 Putative peptidoglycan binding domain GST_N PF02798.20 ORF18146 - 2.2e-10 40.7 0.0 3.3e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF18146 - 0.0039 17.6 0.0 0.0049 17.3 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF18146 - 0.038 14.3 0.0 0.068 13.5 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Pirin_C_2 PF17954.1 ORF17911 - 3.3e-10 40.0 0.0 4.4e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Quercetinase C-terminal cupin domain Laminin_G_3 PF13385.6 ORF17911 - 0.19 11.9 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Concanavalin A-like lectin/glucanases superfamily Dmd PF17587.2 ORF17658 - 0.15 12.4 0.0 0.24 11.8 0.0 1.2 1 0 0 1 1 1 0 Discriminator of mRNA degradation Atg8 PF02991.16 ORF15838 - 1.7e-29 102.1 0.1 1.9e-29 101.9 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF15838 - 1.2e-06 28.8 0.1 1.5e-06 28.5 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 adh_short PF00106.25 ORF152256 - 1.9e-09 37.3 0.1 4.2e-09 36.1 0.0 1.6 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF152256 - 8.2e-06 25.5 0.1 1.1e-05 25.2 0.1 1.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase MRFAP1 PF15155.6 ORF152136 - 0.11 13.1 0.1 0.13 12.8 0.1 1.1 1 0 0 1 1 1 0 MORF4 family-associated protein1 DUF1282 PF06930.12 ORF151572 - 3.4e-21 75.8 6.5 4.2e-21 75.5 6.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1282) Yip1 PF04893.17 ORF151572 - 7.2e-15 55.1 11.3 7.2e-15 55.1 11.3 1.7 1 1 1 2 2 2 1 Yip1 domain B12D PF06522.11 ORF151572 - 0.078 12.8 2.9 0.24 11.2 2.9 1.8 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit 5TM-5TMR_LYT PF07694.12 ORF151482 - 0.035 13.6 0.6 0.053 13.0 0.5 1.3 1 1 0 1 1 1 0 5TMR of 5TMR-LYT TMCO5 PF14992.6 ORF151174 - 0.044 13.4 9.6 0.054 13.1 9.6 1.1 1 0 0 1 1 1 0 TMCO5 family Jnk-SapK_ap_N PF09744.9 ORF151174 - 0.063 13.5 8.5 0.081 13.1 8.5 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 UPF0184 PF03670.13 ORF151174 - 0.16 12.3 5.1 0.077 13.4 2.9 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) Prominin PF05478.11 ORF151174 - 0.22 9.5 6.6 0.25 9.3 6.6 1.0 1 0 0 1 1 1 0 Prominin UPF0449 PF15136.6 ORF151174 - 0.76 10.3 9.9 1.4 9.4 9.9 1.5 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 LMBR1 PF04791.16 ORF151174 - 0.8 8.5 7.1 0.89 8.4 7.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ly49 PF08391.10 ORF151174 - 2 8.8 9.5 3 8.2 9.5 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region TMF_DNA_bd PF12329.8 ORF151174 - 2.1 8.4 9.5 2.7 8.1 8.7 1.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Cir_Bir_Yir PF06022.11 ORF151144 - 0.0051 16.3 1.2 0.0072 15.8 1.2 1.2 1 0 0 1 1 1 1 Plasmodium variant antigen protein Cir/Yir/Bir DUF3810 PF12725.7 ORF151144 - 3.6 6.8 9.7 5.4 6.3 9.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) XTBD PF11952.8 ORF151144 - 8.2 6.3 6.4 11 5.9 6.0 1.4 1 1 0 1 1 1 0 XRN-Two Binding Domain, XTBD Atg8 PF02991.16 ORF149188 - 4.8e-37 126.3 0.1 5.6e-37 126.1 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF149188 - 8.7e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 HTH_33 PF13592.6 ORF149078 - 0.11 12.1 0.6 0.23 11.1 0.6 1.5 1 0 0 1 1 1 0 Winged helix-turn helix DUF1391 PF07151.12 ORF149005 - 1.8e-31 107.7 0.6 2.6e-31 107.2 0.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1391) MORN PF02493.20 ORF148650 - 1.3e-14 53.1 4.1 0.00023 20.8 0.1 3.6 3 0 0 3 3 3 3 MORN repeat Adenylate_cycl PF01295.18 ORF147964 - 0.003 16.3 1.2 0.0034 16.1 1.2 1.0 1 0 0 1 1 1 1 Adenylate cyclase, class-I YgbB PF02542.16 ORF147964 - 0.016 15.5 1.2 0.019 15.2 1.2 1.1 1 0 0 1 1 1 0 YgbB family DUF3456 PF11938.8 ORF147964 - 0.036 14.6 5.5 0.046 14.2 5.5 1.1 1 0 0 1 1 1 0 TLR4 regulator and MIR-interacting MSAP DUF3507 PF12015.8 ORF147643 - 0.0056 16.4 0.0 0.0063 16.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3507) Herpes_pp85 PF04637.12 ORF146785 - 4.2 5.7 7.1 5 5.4 7.1 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) TMCO5 PF14992.6 ORF144817 - 0.044 13.4 9.6 0.054 13.1 9.6 1.1 1 0 0 1 1 1 0 TMCO5 family Jnk-SapK_ap_N PF09744.9 ORF144817 - 0.063 13.5 8.5 0.081 13.1 8.5 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 UPF0184 PF03670.13 ORF144817 - 0.16 12.3 5.1 0.077 13.4 2.9 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0184) Prominin PF05478.11 ORF144817 - 0.22 9.5 6.6 0.25 9.3 6.6 1.0 1 0 0 1 1 1 0 Prominin UPF0449 PF15136.6 ORF144817 - 0.76 10.3 9.9 1.4 9.4 9.9 1.5 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 LMBR1 PF04791.16 ORF144817 - 0.8 8.5 7.1 0.89 8.4 7.1 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ly49 PF08391.10 ORF144817 - 2 8.8 9.5 3 8.2 9.5 1.4 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region TMF_DNA_bd PF12329.8 ORF144817 - 2.1 8.4 9.5 2.7 8.1 8.7 1.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF3486 PF11985.8 ORF142946 - 0.046 14.1 0.0 0.081 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) Spore_Cse60 PF10957.8 ORF142946 - 0.22 11.6 3.0 31 4.7 0.3 3.1 2 1 1 3 3 3 0 Sporulation protein Cse60 MORN PF02493.20 ORF141833 - 1.1e-14 53.3 4.5 0.00023 20.8 0.1 3.6 3 0 0 3 3 3 3 MORN repeat LuxE PF04443.12 ORF141392 - 0.25 10.3 0.3 0.29 10.1 0.3 1.1 1 0 0 1 1 1 0 Acyl-protein synthetase, LuxE PDZ_2 PF13180.6 ORF141204 - 4.1e-18 65.5 0.4 5e-18 65.2 0.4 1.1 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF141204 - 1.1e-11 44.4 0.3 1.6e-11 43.9 0.3 1.2 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF141204 - 7.6e-10 39.0 2.1 1.1e-09 38.6 2.1 1.3 1 1 0 1 1 1 1 PDZ domain Tricorn_PDZ PF14685.6 ORF141204 - 5.5e-05 23.1 0.1 7.3e-05 22.7 0.1 1.3 1 0 0 1 1 1 1 Tricorn protease PDZ domain THEG PF14912.6 ORF140848 - 0.0065 16.9 1.4 0.065 13.7 1.3 2.2 1 1 0 1 1 1 1 Testicular haploid expressed repeat DDE_Tnp_IS240 PF13610.6 ORF140848 - 0.1 12.8 0.5 0.11 12.7 0.5 1.3 1 1 0 1 1 1 0 DDE domain HATPase_c PF02518.26 ORF140746 - 0.023 15.2 0.1 0.044 14.3 0.1 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Phage_TAC_4 PF08748.11 ORF140746 - 0.045 14.1 0.0 0.054 13.8 0.0 1.2 1 0 0 1 1 1 0 Phage tail assembly chaperone YokU PF14122.6 ORF140746 - 0.048 13.6 0.2 0.067 13.2 0.2 1.3 1 0 0 1 1 1 0 YokU-like protein, putative antitoxin U-box PF04564.15 ORF140011 - 6.6e-05 23.0 0.0 0.00016 21.8 0.0 1.6 1 0 0 1 1 1 1 U-box domain ADIP PF11559.8 ORF140011 - 0.037 14.1 10.2 0.042 13.9 10.2 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding Tox-ODYAM1 PF15642.6 ORF140011 - 0.051 12.5 2.3 0.058 12.4 2.3 1.0 1 0 0 1 1 1 0 Toxin in Odyssella and Amoebophilus EF-G-binding_N PF07299.11 ORF140011 - 0.092 13.3 3.5 0.14 12.7 3.5 1.3 1 0 0 1 1 1 0 Elongation factor G-binding protein, N-terminal zf-RING_UBOX PF13445.6 ORF140011 - 0.12 12.4 0.4 0.44 10.6 0.1 1.9 2 0 0 2 2 2 0 RING-type zinc-finger DUF4201 PF13870.6 ORF140011 - 0.15 11.7 10.6 0.2 11.4 10.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) MPC PF03650.13 ORF139732 - 3.3e-34 117.4 1.2 3.7e-34 117.2 1.2 1.0 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers MtN3_slv PF03083.16 ORF139732 - 0.0098 15.9 1.6 0.012 15.6 1.6 1.3 1 0 0 1 1 1 1 Sugar efflux transporter for intercellular exchange DUF3454 PF11936.8 ORF139118 - 0.0049 17.2 0.6 0.0049 17.2 0.6 2.0 2 1 0 2 2 2 1 Domain of unknown function (DUF3454) Skp1 PF01466.19 ORF139118 - 0.012 15.7 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 Skp1 family, dimerisation domain SelP_N PF04592.14 ORF138840 - 0.0092 15.4 0.1 0.012 15.0 0.1 1.1 1 0 0 1 1 1 1 Selenoprotein P, N terminal region DUF5443 PF17518.2 ORF138375 - 0.0072 15.3 0.1 0.0072 15.3 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5443) Baculo_LEF5 PF04838.12 ORF138375 - 0.19 11.8 4.2 0.35 10.9 1.1 2.0 1 1 1 2 2 2 0 Baculoviridae late expression factor 5 ComS PF17584.2 ORF138339 - 0.2 11.2 0.4 0.2 11.2 0.4 2.2 2 0 0 2 2 2 0 Bacillus competence protein S Conotoxin PF02950.17 ORF138234 - 0.076 14.0 1.2 0.12 13.4 1.2 1.3 1 0 0 1 1 1 0 Conotoxin EF-hand_6 PF13405.6 ORF137947 - 9.4e-12 43.9 0.6 0.0001 21.9 0.1 2.8 2 1 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF137947 - 3e-11 43.6 3.9 2.7e-08 34.1 0.5 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF137947 - 5.1e-11 41.3 0.7 0.00028 20.2 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF137947 - 1.3e-10 40.2 2.1 4.8e-05 22.7 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF137947 - 2e-05 24.3 0.5 0.035 14.0 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF137947 - 7.4e-05 22.5 1.0 0.0012 18.6 0.1 2.5 2 0 0 2 2 2 1 EF hand Peptidase_M73 PF12389.8 ORF137947 - 0.0048 16.8 2.0 0.0052 16.7 2.0 1.2 1 0 0 1 1 1 1 Camelysin metallo-endopeptidase EF-hand_9 PF14658.6 ORF137947 - 0.015 15.6 0.0 1.3 9.3 0.0 2.3 2 0 0 2 2 2 0 EF-hand domain RE_HpaII PF09561.10 ORF137947 - 0.024 14.0 3.4 1.5 8.1 0.5 2.0 1 1 1 2 2 2 0 HpaII restriction endonuclease Cullin_binding PF03556.15 ORF137947 - 0.034 14.6 0.0 5.4 7.5 0.0 1.9 1 1 1 2 2 2 0 Cullin binding PhnA PF03831.14 ORF137549 - 4.6e-35 119.3 4.5 5.6e-35 119.0 4.5 1.1 1 0 0 1 1 1 1 PhnA domain PhnA_Zn_Ribbon PF08274.12 ORF137549 - 1.2e-15 57.2 7.1 2.4e-15 56.1 7.1 1.5 1 0 0 1 1 1 1 PhnA Zinc-Ribbon TF_Zn_Ribbon PF08271.12 ORF137549 - 1.4e-05 24.5 1.9 1.4e-05 24.5 1.9 1.9 2 1 0 2 2 2 1 TFIIB zinc-binding zf-RRN7 PF11781.8 ORF137549 - 3.7e-05 23.3 0.9 3.7e-05 23.3 0.9 1.9 2 0 0 2 2 2 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 A2L_zn_ribbon PF08792.10 ORF137549 - 0.0095 15.6 1.5 0.0095 15.6 1.5 1.9 2 0 0 2 2 2 1 A2L zinc ribbon domain PADR1 PF08063.12 ORF137549 - 0.014 15.2 3.1 0.029 14.1 3.1 1.6 1 0 0 1 1 1 0 PADR1 (NUC008) domain Zn_Tnp_IS1595 PF12760.7 ORF137549 - 0.05 13.6 1.5 0.11 12.5 1.5 1.6 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zinc-ribbons_6 PF07191.12 ORF137549 - 0.052 13.5 0.8 0.052 13.5 0.8 1.7 2 0 0 2 2 2 0 zinc-ribbons DZR PF12773.7 ORF137549 - 0.18 11.8 3.6 0.33 11.0 1.2 2.1 2 0 0 2 2 2 0 Double zinc ribbon UPF0547 PF10571.9 ORF137549 - 0.76 9.9 0.1 0.76 9.9 0.1 2.7 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 HypA PF01155.19 ORF137549 - 1 9.4 3.7 0.25 11.4 0.3 1.7 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_4 PF13717.6 ORF137549 - 3.4 7.7 6.2 70 3.5 6.2 2.6 1 1 0 1 1 1 0 zinc-ribbon domain TRA-1_regulated PF02343.16 ORF137320 - 0.041 13.9 0.3 0.067 13.3 0.0 1.5 2 0 0 2 2 2 0 TRA-1 regulated protein R03H10.4 DUF3486 PF11985.8 ORF135955 - 0.041 14.3 0.0 0.081 13.3 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3486) Fibrillin_U_N PF18193.1 ORF133965 - 0.034 14.2 2.4 0.075 13.2 2.4 1.5 1 0 0 1 1 1 0 Fibrillin 1 unique N-terminal domain HRG PF16954.5 ORF133965 - 1.8 9.0 8.1 3.7 8.0 2.7 2.3 1 1 1 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene Ribonuc_red_sm PF00268.21 ORF133795 - 0.0051 16.3 0.3 0.0056 16.2 0.3 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Peptidase_C7 PF01830.18 ORF132873 - 0.32 10.4 3.9 0.45 9.9 3.8 1.2 1 1 0 1 1 1 0 Peptidase C7 family DUF3646 PF12362.8 ORF131913 - 0.053 13.8 0.1 0.26 11.6 0.0 1.9 1 1 1 2 2 2 0 DNA polymerase III gamma and tau subunits C terminal Ycf70 PF17382.2 ORF13145 - 1 9.8 3.9 2.1 8.8 1.0 2.0 2 0 0 2 2 2 0 Uncharacterized Ycf70-like Rsd_AlgQ PF04353.13 ORF131279 - 1.9e-33 115.5 0.5 2.1e-33 115.4 0.5 1.0 1 0 0 1 1 1 1 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ TRPM_tetra PF16519.5 ORF129830 - 0.21 11.7 0.1 0.41 10.8 0.1 1.4 1 0 0 1 1 1 0 Tetramerisation domain of TRPM DUF3646 PF12362.8 ORF129073 - 0.053 13.8 0.1 0.26 11.6 0.0 1.9 1 1 1 2 2 2 0 DNA polymerase III gamma and tau subunits C terminal Ribosomal_L18p PF00861.22 ORF128425 - 1.3e-43 148.0 4.5 1.5e-43 147.9 4.5 1.0 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L5e PF17144.4 ORF128425 - 0.0047 16.9 0.1 0.0053 16.8 0.1 1.1 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 TM1506 PF08973.10 ORF128425 - 0.091 12.4 0.2 0.16 11.6 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1893) Toxin_38 PF14866.6 ORF128369 - 0.071 13.4 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Potassium channel toxin N_BRCA1_IG PF16158.5 ORF128085 - 0.012 16.3 0.0 0.015 16.1 0.0 1.1 1 0 0 1 1 1 0 Ig-like domain from next to BRCA1 gene MORN PF02493.20 ORF127074 - 2.5e-14 52.2 5.9 0.00023 20.8 0.1 3.8 4 0 0 4 4 4 3 MORN repeat Atg8 PF02991.16 ORF126071 - 2.8e-37 127.0 0.4 3.2e-37 126.9 0.4 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF126071 - 5.8e-05 23.4 0.1 7.2e-05 23.1 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 DUF3848 PF12959.7 ORF126071 - 0.041 13.9 0.9 5.3 7.2 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3848) ARS2 PF04959.13 ORF126071 - 0.064 13.6 0.4 0.083 13.3 0.4 1.1 1 0 0 1 1 1 0 Arsenite-resistance protein 2 Pfk_N PF18468.1 ORF125191 - 0.013 15.9 0.0 0.024 15.1 0.0 1.4 1 0 0 1 1 1 0 Phosphofructokinase N-terminal domain yeast Tfb2_C PF18307.1 ORF125191 - 0.022 15.2 0.6 0.12 12.8 0.2 2.0 2 0 0 2 2 2 0 Transcription factor Tfb2 (p52) C-terminal domain TOPRIM_C PF16898.5 ORF125191 - 0.076 13.3 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 C-terminal associated domain of TOPRIM zf-C3HC4 PF00097.25 ORF125182 - 0.0037 17.1 0.8 0.0076 16.1 0.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF125182 - 0.024 14.4 2.0 0.024 14.4 2.0 1.9 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) CcmD PF04995.14 ORF125182 - 0.21 11.7 0.5 0.43 10.7 0.5 1.5 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) DUF4191 PF13829.6 ORF125182 - 0.76 9.1 1.9 0.96 8.7 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) zf-RING_5 PF14634.6 ORF125182 - 0.83 9.7 7.0 0.18 11.8 1.9 2.1 2 0 0 2 2 2 0 zinc-RING finger domain DUF2244 PF10003.9 ORF124895 - 0.41 10.3 3.2 0.58 9.8 3.2 1.2 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) CUE PF02845.16 ORF123239 - 3.5e-13 49.0 0.2 5.5e-13 48.3 0.2 1.3 1 0 0 1 1 1 1 CUE domain PIN_5 PF08745.11 ORF122999 - 0.058 12.8 0.2 0.08 12.4 0.2 1.5 1 1 0 1 1 1 0 PINc domain ribonuclease FBA_2 PF07735.17 ORF122811 - 0.016 15.3 0.1 0.024 14.8 0.1 1.2 1 0 0 1 1 1 0 F-box associated TcdB_N PF12918.7 ORF122811 - 0.017 15.4 0.2 0.023 15.0 0.2 1.1 1 0 0 1 1 1 0 TcdB toxin N-terminal helical domain Pentapeptide PF00805.22 ORF122598 - 0.45 10.2 5.5 0.55 9.9 1.0 2.2 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) AP2 PF00847.20 ORF122537 - 0.00016 21.8 0.3 0.00027 21.1 0.3 1.4 1 0 0 1 1 1 1 AP2 domain tRNA_NucTran2_2 PF13735.6 ORF122537 - 0.07 13.1 0.1 0.079 13.0 0.1 1.1 1 0 0 1 1 1 0 tRNA nucleotidyltransferase domain 2 putative SPOR PF05036.13 ORF122537 - 0.1 13.0 0.1 1.2 9.6 0.1 2.1 1 1 0 1 1 1 0 Sporulation related domain KRTDAP PF15200.6 ORF12202 - 0.067 13.0 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Keratinocyte differentiation-associated Syntaxin_2 PF14523.6 ORF121869 - 0.025 14.9 2.8 0.049 14.0 2.8 1.5 1 0 0 1 1 1 0 Syntaxin-like protein PA28_alpha PF02251.18 ORF121869 - 0.08 13.0 0.1 4.4 7.4 0.0 2.3 2 0 0 2 2 2 0 Proteasome activator pa28 alpha subunit SOUL PF04832.12 ORF121869 - 0.13 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 SOUL heme-binding protein DcuC PF03606.15 ORF121452 - 2.8e-07 29.4 0.1 3.5e-07 29.1 0.1 1.1 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier SRTM1 PF15872.5 ORF119816 - 4.3 7.6 13.9 0.45 10.7 9.0 1.8 1 1 1 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 DUF4446 PF14584.6 ORF117016 - 0.042 13.8 0.7 0.064 13.2 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF3454 PF11936.8 ORF116357 - 0.0049 17.2 0.6 0.0049 17.2 0.6 2.0 2 1 0 2 2 2 1 Domain of unknown function (DUF3454) Skp1 PF01466.19 ORF116357 - 0.012 15.7 0.0 0.018 15.1 0.0 1.3 1 0 0 1 1 1 0 Skp1 family, dimerisation domain Integrase_Zn PF02022.19 ORF115632 - 0.02 14.8 0.1 0.02 14.8 0.1 1.7 2 0 0 2 2 2 0 Integrase Zinc binding domain Atg8 PF02991.16 ORF114715 - 4.8e-37 126.3 0.1 5.6e-37 126.1 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF114715 - 8.7e-05 22.8 0.0 0.00011 22.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 7TM_GPCR_Srab PF10292.9 ORF114384 - 0.004 16.1 5.4 0.0045 15.9 5.4 1.2 1 0 0 1 1 1 1 Serpentine type 7TM GPCR receptor class ab chemoreceptor Asp_Arg_Hydrox PF05118.15 ORF114270 - 0.0023 17.8 0.6 0.0034 17.2 0.6 1.2 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase FAM24 PF15193.6 ORF113588 - 0.078 13.8 0.4 0.11 13.3 0.4 1.4 1 1 0 1 1 1 0 FAM24 family SpvD PF05563.12 ORF113282 - 0.16 11.6 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Salmonella plasmid virulence protein SpvD His_Phos_1 PF00300.22 ORF113131 - 1.1e-08 35.0 0.0 1.3e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Ectoine_synth PF06339.12 ORF1124 - 0.028 14.6 0.0 0.037 14.2 0.0 1.2 1 0 0 1 1 1 0 Ectoine synthase PAGK PF15284.6 ORF11111 - 0.16 11.9 0.0 0.33 10.9 0.0 1.6 1 0 0 1 1 1 0 Phage-encoded virulence factor Atg8 PF02991.16 ORF107908 - 1.7e-29 102.1 0.1 1.9e-29 101.9 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF107908 - 1.2e-06 28.8 0.1 1.5e-06 28.5 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 DUF4029 PF13221.6 ORF106458 - 0.84 10.3 10.4 1.1 10.0 10.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4029) zf-LITAF-like PF10601.9 ORF106441 - 2.5e-15 56.5 17.3 3.3e-15 56.1 17.3 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain PXPV PF12778.7 ORF106441 - 0.064 13.1 9.3 0.064 13.1 9.3 2.0 2 1 0 2 2 2 0 PXPV repeat (3 copies) Pho88 PF10032.9 ORF106398 - 0.025 13.8 0.1 0.032 13.5 0.1 1.3 1 0 0 1 1 1 0 Phosphate transport (Pho88) DUF952 PF06108.12 ORF105613 - 0.0013 18.6 0.1 0.0017 18.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF952) MAPEG PF01124.18 ORF105420 - 9.6e-06 25.5 0.2 1.1e-05 25.3 0.2 1.2 1 0 0 1 1 1 1 MAPEG family Epiglycanin_C PF14654.6 ORF105420 - 0.066 13.3 1.8 0.1 12.6 0.2 1.9 2 0 0 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region Ribosomal_L18 PF17135.4 ORF104971 - 5.5e-58 195.4 0.6 6e-58 195.3 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 ORF104971 - 0.044 14.5 0.0 0.044 14.5 0.0 1.8 2 0 0 2 2 2 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AAA_19 PF13245.6 ORF104971 - 0.11 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain JSRP PF15312.6 ORF104559 - 0.12 12.3 2.6 0.3 11.1 2.6 1.8 1 1 0 1 1 1 0 Junctional sarcoplasmic reticulum protein Phage_rep_O PF04492.13 ORF104152 - 0.087 13.4 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage replication protein O FAM24 PF15193.6 ORF103957 - 0.078 13.8 0.4 0.11 13.3 0.4 1.4 1 1 0 1 1 1 0 FAM24 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks226.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks226.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks226.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks226.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RRM_8 PF11835.8 ORF10369 - 0.029 14.6 1.5 3.8 7.8 0.0 2.2 2 0 0 2 2 2 0 RRM-like domain GP41 PF00517.17 ORF102770 - 0.27 11.1 1.0 0.33 10.8 1.0 1.1 1 0 0 1 1 1 0 Retroviral envelope protein KCNQ2_u3 PF16642.5 ORF102770 - 9 7.4 12.3 4.8 8.2 7.1 2.0 1 1 1 2 2 2 0 Unstructured region on Potassium channel subunit alpha KvLQT2 HTH_7 PF02796.15 ORF10271 - 0.2 11.7 0.9 9.7 6.4 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Papo_T_antigen PF02380.15 ORF101919 - 0.041 14.0 0.1 0.07 13.3 0.1 1.4 1 0 0 1 1 1 0 T-antigen specific domain Herpes_heli_pri PF05774.11 ORF100487 - 0.2 11.9 0.4 0.24 11.6 0.4 1.1 1 0 0 1 1 1 0 Herpesvirus helicase-primase complex component ESF1 PF18209.1 NODE_52011_length_346_cov_1.205788_g44094_i0reverse_frame_1 - 0.016 15.1 0.4 0.03 14.2 0.4 1.5 1 0 0 1 1 1 0 Embryo surrounding factor 1 NifW PF03206.14 NODE_52009_length_346_cov_1.533762_g44092_i0reverse_frame_1 - 0.019 15.5 0.1 0.025 15.1 0.1 1.2 1 0 0 1 1 1 0 Nitrogen fixation protein NifW Kin17_mid PF10357.9 NODE_52009_length_346_cov_1.533762_g44092_i0reverse_frame_1 - 0.021 14.7 2.3 0.63 10.0 0.3 2.2 1 1 0 2 2 2 0 Domain of Kin17 curved DNA-binding protein DUF1765 PF08578.10 NODE_52009_length_346_cov_1.533762_g44092_i0reverse_frame_1 - 0.075 13.5 2.1 0.66 10.5 2.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1765) DUF4533 PF15047.6 NODE_52009_length_346_cov_1.533762_g44092_i0reverse_frame_1 - 0.09 12.3 2.7 0.11 12.1 2.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4533) Cobl PF09469.10 NODE_52006_length_346_cov_1.803859_g44089_i0forward_frame_1 - 0.0099 16.1 0.2 0.014 15.6 0.2 1.3 1 0 0 1 1 1 1 Cordon-bleu ubiquitin-like domain RhlB PF12300.8 NODE_52004_length_346_cov_1.852090_g44087_i0reverse_frame_1 - 1.6 8.8 10.7 2.5 8.2 10.8 1.3 1 1 0 1 1 1 0 ATP-dependent RNA helicase RhlB ASH PF15780.5 NODE_52003_length_346_cov_1.890675_g44086_i0reverse_frame_1 - 0.0011 19.2 0.1 0.078 13.2 0.0 2.2 2 0 0 2 2 2 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin TMEM131_like PF12371.8 NODE_52003_length_346_cov_1.890675_g44086_i0reverse_frame_1 - 0.076 13.3 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 Transmembrane protein 131-like PapD-like PF14874.6 NODE_52003_length_346_cov_1.890675_g44086_i0reverse_frame_1 - 0.11 12.7 0.1 0.86 9.8 0.0 1.9 2 0 0 2 2 2 0 Flagellar-associated PapD-like S1FA PF04689.13 NODE_52002_length_346_cov_1.971061_g44085_i0forward_frame_1 - 0.071 13.3 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 DNA binding protein S1FA TILa PF12714.7 NODE_51996_length_346_cov_2.257235_g44079_i0reverse_frame_1 - 0.1 12.6 0.4 0.15 12.0 0.4 1.3 1 0 0 1 1 1 0 TILa domain Angiomotin_C PF12240.8 NODE_51994_length_346_cov_2.286174_g44077_i0forward_frame_1 - 0.014 15.0 0.3 0.017 14.7 0.3 1.1 1 0 0 1 1 1 0 Angiomotin C terminal PIG-S PF10510.9 NODE_51994_length_346_cov_2.286174_g44077_i0forward_frame_1 - 0.039 12.8 0.5 0.038 12.8 0.5 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-glycan biosynthesis class S protein SelP_C PF04593.14 NODE_51986_length_346_cov_2.913183_g44069_i0reverse_frame_1 - 0.016 15.2 1.0 0.023 14.7 0.9 1.3 1 1 0 1 1 1 0 Selenoprotein P, C terminal region SepRS_C PF18006.1 NODE_51986_length_346_cov_2.913183_g44069_i0forward_frame_1 - 0.084 13.0 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 O-phosphoseryl-tRNA synthetase C-terminal domain DUF3226 PF11536.8 NODE_51973_length_346_cov_43.466238_g44056_i0reverse_frame_1 - 0.013 15.2 2.5 0.15 11.7 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3226) Ish1 PF10281.9 NODE_51973_length_346_cov_43.466238_g44056_i0reverse_frame_1 - 0.016 15.5 0.5 0.44 10.9 0.1 2.4 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein CaM_binding PF07839.11 NODE_51973_length_346_cov_43.466238_g44056_i0reverse_frame_1 - 0.035 14.8 2.0 0.043 14.5 2.0 1.3 1 0 0 1 1 1 0 Plant calmodulin-binding domain RBD-FIP PF09457.10 NODE_51973_length_346_cov_43.466238_g44056_i0reverse_frame_1 - 0.51 10.3 3.3 0.68 9.9 0.4 2.3 2 0 0 2 2 2 0 FIP domain Morc6_S5 PF17942.1 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_1 - 0.024 14.7 0.1 0.094 12.8 0.0 1.8 1 1 0 2 2 2 0 Morc6 ribosomal protein S5 domain 2-like Rab3-GTPase_cat PF13890.6 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_1 - 0.027 14.1 0.1 0.029 14.0 0.1 1.2 1 0 0 1 1 1 0 Rab3 GTPase-activating protein catalytic subunit cPLA2_C2 PF18695.1 NODE_51964_length_346_cov_66.372990_g44047_i0forward_frame_1 - 0.13 12.2 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Cytosolic phospholipases A2 C2-domain Phage_holin_3_6 PF07332.11 NODE_51958_length_346_cov_83.054662_g44041_i0reverse_frame_1 - 0.0077 16.3 1.8 0.01 15.9 1.8 1.3 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III zf-like PF04071.12 NODE_51956_length_346_cov_96.334405_g44039_i0reverse_frame_1 - 0.4 10.6 9.9 0.2 11.6 8.2 1.4 1 1 0 1 1 1 0 Cysteine-rich small domain MyTH4 PF00784.17 NODE_51952_length_346_cov_110.942122_g44035_i0forward_frame_1 - 1.4 9.5 3.5 7.7 7.1 0.3 2.2 2 0 0 2 2 2 0 MyTH4 domain PTCRA PF15028.6 NODE_51944_length_346_cov_284.475884_g44027_i0reverse_frame_1 - 1.2 8.8 7.8 1.4 8.6 3.1 2.2 1 1 1 2 2 2 0 Pre-T-cell antigen receptor Wap1 PF16997.5 NODE_51943_length_346_cov_489.765273_g44026_i0reverse_frame_1 - 0.046 12.9 0.0 0.048 12.8 0.0 1.1 1 0 0 1 1 1 0 Wap1 domain DUF1664 PF07889.12 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.0019 18.2 0.9 0.0034 17.4 0.9 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.024 14.9 1.4 0.024 14.9 1.4 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1690 PF07956.11 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.028 14.9 1.1 0.038 14.4 0.8 1.4 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF948 PF06103.11 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.029 14.6 0.2 0.36 11.1 0.1 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) NAP PF00956.18 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.037 13.2 0.1 0.039 13.1 0.1 1.2 1 0 0 1 1 1 0 Nucleosome assembly protein (NAP) NPV_P10 PF05531.12 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.038 14.4 2.0 0.071 13.6 0.8 2.0 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF2937 PF11157.8 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.042 13.5 0.4 4.8 6.9 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2937) Prefoldin PF02996.17 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.049 13.6 3.5 8 6.4 0.2 2.7 1 1 2 3 3 3 0 Prefoldin subunit Laminin_II PF06009.12 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.057 13.4 1.0 0.11 12.5 1.0 1.6 1 1 0 1 1 1 0 Laminin Domain II XhlA PF10779.9 NODE_51941_length_346_cov_715.102894_g44024_i0reverse_frame_1 - 0.12 12.6 3.9 0.12 12.6 0.7 2.1 2 0 0 2 2 2 0 Haemolysin XhlA Rotamase PF00639.21 NODE_51930_length_347_cov_1.025641_g44014_i0reverse_frame_1 - 0.00092 20.1 0.4 0.068 14.1 0.1 2.1 2 0 0 2 2 2 2 PPIC-type PPIASE domain Rotamase_3 PF13616.6 NODE_51930_length_347_cov_1.025641_g44014_i0reverse_frame_1 - 0.005 17.4 0.3 0.0068 16.9 0.3 1.3 1 0 0 1 1 1 1 PPIC-type PPIASE domain DUF3290 PF11694.8 NODE_51928_length_347_cov_1.272436_g44012_i0forward_frame_1 - 0.11 12.5 3.3 0.11 12.5 0.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3290) XhlA PF10779.9 NODE_51921_length_347_cov_1.644231_g44005_i0reverse_frame_1 - 3.8 7.8 13.6 6 7.2 6.1 3.1 2 2 0 2 2 2 0 Haemolysin XhlA Noelin-1 PF12308.8 NODE_51914_length_347_cov_1.980769_g43998_i0reverse_frame_1 - 0.0041 17.1 0.4 0.0071 16.3 0.4 1.4 1 0 0 1 1 1 1 Neurogenesis glycoprotein Tmemb_9 PF05434.11 NODE_51914_length_347_cov_1.980769_g43998_i0forward_frame_1 - 6.4 6.7 7.4 2.1 8.2 5.0 1.5 1 1 0 1 1 1 0 TMEM9 gp32 PF08804.10 NODE_51908_length_347_cov_2.544872_g43992_i0reverse_frame_1 - 0.033 14.2 0.4 0.038 14.1 0.4 1.1 1 0 0 1 1 1 0 gp32 DNA binding protein like eIF3g PF12353.8 NODE_51908_length_347_cov_2.544872_g43992_i0reverse_frame_1 - 0.035 14.5 0.3 0.057 13.8 0.3 1.4 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit G Cons_hypoth698 PF03601.14 NODE_51907_length_347_cov_2.663462_g43991_i0forward_frame_1 - 0.04 12.8 0.6 0.058 12.3 0.6 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 698 Toxin_14 PF07829.11 NODE_51904_length_347_cov_2.794872_g43988_i0forward_frame_1 - 6.6 6.8 14.4 0.36 10.8 7.4 2.4 3 0 0 3 3 3 0 Alpha-A conotoxin PIVA-like protein HIT PF01230.23 NODE_51903_length_347_cov_2.881410_g43987_i0forward_frame_1 - 1e-28 99.9 0.2 1.3e-28 99.6 0.2 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 NODE_51903_length_347_cov_2.881410_g43987_i0forward_frame_1 - 1.9e-22 79.9 0.1 2.1e-22 79.7 0.1 1.0 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding Smoa_sbd PF17885.1 NODE_51899_length_347_cov_3.233974_g43983_i0reverse_frame_1 - 0.082 13.0 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Styrene monooxygenase A putative substrate binding domain ODV-E18 PF10717.9 NODE_51898_length_347_cov_3.628205_g43982_i0forward_frame_1 - 0.023 14.6 0.0 0.031 14.2 0.0 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 TPP_enzyme_M_2 PF16582.5 NODE_51896_length_347_cov_3.875000_g43980_i0reverse_frame_1 - 0.061 13.0 0.0 0.065 12.9 0.0 1.1 1 0 0 1 1 1 0 Middle domain of thiamine pyrophosphate v110 PF01639.17 NODE_51889_length_347_cov_43.230769_g43973_i0reverse_frame_1 - 0.071 13.0 2.9 0.1 12.5 2.7 1.4 1 1 0 1 1 1 0 Viral family 110 IL33 PF15095.6 NODE_51885_length_347_cov_57.977564_g43969_i0forward_frame_1 - 0.015 14.8 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 Interleukin 33 CCDC106 PF15794.5 NODE_51882_length_347_cov_60.016026_g43966_i0reverse_frame_1 - 0.1 12.3 6.6 0.11 12.2 6.6 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 NKAP PF15692.5 NODE_51882_length_347_cov_60.016026_g43966_i0reverse_frame_1 - 5.1 7.9 19.7 7 7.5 19.7 1.2 1 0 0 1 1 1 0 NF-kappa-B-activating protein PsbH PF00737.20 NODE_51876_length_347_cov_67.961538_g43960_i0reverse_frame_1 - 0.16 11.7 0.4 0.28 11.0 0.4 1.3 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein CHASE2 PF05226.11 NODE_51869_length_347_cov_90.429487_g43953_i0reverse_frame_1 - 0.11 12.1 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 CHASE2 domain SerH PF06873.11 NODE_51868_length_347_cov_94.875000_g43952_i0forward_frame_1 - 0.2 10.4 5.8 0.46 9.2 6.0 1.4 1 1 0 1 1 1 0 Cell surface immobilisation antigen SerH DUF3410 PF11890.8 NODE_51865_length_347_cov_102.535256_g43949_i0forward_frame_1 - 0.074 12.8 0.3 0.12 12.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) HCV_NS4a PF01006.20 NODE_51865_length_347_cov_102.535256_g43949_i0forward_frame_1 - 0.12 12.2 0.1 0.21 11.4 0.1 1.6 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS4a TatC PF00902.18 NODE_51864_length_347_cov_106.698718_g43948_i0forward_frame_1 - 0.029 14.2 0.2 0.029 14.2 0.2 1.2 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) DUF1574 PF07611.11 NODE_51860_length_347_cov_134.317308_g43944_i0reverse_frame_1 - 0.013 14.8 1.0 0.017 14.5 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1574) NSP2-B_epitope PF14757.6 NODE_51860_length_347_cov_134.317308_g43944_i0reverse_frame_1 - 0.035 13.8 0.0 0.035 13.8 0.0 1.1 1 0 0 1 1 1 0 Immunogenic region of nsp2 protein of arterivirus polyprotein HTH_AraC PF00165.23 NODE_51835_length_348_cov_1.699681_g43920_i0forward_frame_1 - 0.15 12.2 3.8 0.2 11.8 0.2 2.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family Pox_RNA_Pol_19 PF05320.12 NODE_51829_length_348_cov_2.006390_g43914_i0forward_frame_1 - 0.16 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit Pkinase PF00069.25 NODE_51820_length_348_cov_2.255591_g43905_i0reverse_frame_1 - 4.8e-06 26.1 0.0 7.7e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Josephin PF02099.17 NODE_51820_length_348_cov_2.255591_g43905_i0reverse_frame_1 - 0.0095 16.0 0.2 0.012 15.7 0.2 1.1 1 0 0 1 1 1 1 Josephin DUF2145 PF09916.9 NODE_51820_length_348_cov_2.255591_g43905_i0reverse_frame_1 - 0.016 14.9 0.2 0.018 14.7 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2145) AAR2 PF05282.11 NODE_51813_length_348_cov_2.520767_g43898_i0reverse_frame_1 - 0.5 9.7 1.5 0.58 9.5 1.5 1.0 1 0 0 1 1 1 0 AAR2 protein Pkinase PF00069.25 NODE_51810_length_348_cov_2.690096_g43895_i0reverse_frame_1 - 0.00024 20.6 0.1 0.00031 20.2 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_51810_length_348_cov_2.690096_g43895_i0reverse_frame_1 - 0.0011 18.3 0.1 0.0014 18.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3845 PF12956.7 NODE_51810_length_348_cov_2.690096_g43895_i0forward_frame_1 - 0.42 10.0 2.5 0.54 9.7 2.5 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure ComGF PF15980.5 NODE_51809_length_348_cov_2.782748_g43894_i0reverse_frame_1 - 0.021 15.1 1.9 0.031 14.6 1.9 1.3 1 0 0 1 1 1 0 Putative Competence protein ComGF DUF3177 PF11375.8 NODE_51808_length_348_cov_2.955272_g43893_i0forward_frame_1 - 0.17 11.6 0.1 0.24 11.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3177) Adeno_E3_CR2 PF02439.15 NODE_51807_length_348_cov_2.974441_g43892_i0forward_frame_1 - 0.11 12.3 0.1 0.18 11.6 0.1 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 2OG-FeII_Oxy_2 PF13532.6 NODE_51804_length_348_cov_3.287540_g43889_i0reverse_frame_1 - 0.023 14.9 0.0 0.025 14.8 0.0 1.3 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily cobW PF02492.19 NODE_51802_length_348_cov_3.479233_g43887_i0forward_frame_1 - 5.7e-07 29.3 0.0 6.7e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain SHMT PF00464.19 NODE_51799_length_348_cov_3.945687_g43884_i0reverse_frame_1 - 2.2e-17 62.7 0.0 2.7e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase TruD PF01142.18 NODE_51798_length_348_cov_4.364217_g43883_i0forward_frame_1 - 3.2e-11 42.7 0.0 3.7e-11 42.5 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) DUF1566 PF07603.11 NODE_51798_length_348_cov_4.364217_g43883_i0forward_frame_1 - 0.068 13.5 0.1 0.083 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1566) DUF4926 PF16277.5 NODE_51797_length_348_cov_4.424920_g43882_i0reverse_frame_1 - 0.13 11.7 0.1 0.31 10.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4926) Fmp27_WPPW PF10359.9 NODE_51794_length_348_cov_45.348243_g43879_i0reverse_frame_1 - 0.0071 15.3 1.6 0.0072 15.2 1.6 1.1 1 0 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain SHE3 PF17078.5 NODE_51794_length_348_cov_45.348243_g43879_i0reverse_frame_1 - 0.023 14.4 3.2 0.029 14.1 3.2 1.1 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 SOGA PF11365.8 NODE_51794_length_348_cov_45.348243_g43879_i0reverse_frame_1 - 0.03 15.4 1.5 0.045 14.9 1.5 1.4 1 0 0 1 1 1 0 Protein SOGA CNP1 PF08750.11 NODE_51791_length_348_cov_53.792332_g43292_i1reverse_frame_1 - 0.089 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 CNP1-like family DUF2198 PF09964.9 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_1 - 0.019 15.0 0.6 0.035 14.2 0.6 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2198) MDMPI_C PF07398.11 NODE_51786_length_348_cov_75.555911_g43872_i0reverse_frame_1 - 0.58 11.0 8.2 0.39 11.6 5.0 2.1 2 1 1 3 3 3 0 MDMPI C-terminal domain Cadherin_tail PF15974.5 NODE_51772_length_348_cov_117.610224_g43858_i0reverse_frame_1 - 0.99 9.7 5.1 1.4 9.3 5.1 1.2 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region zf-RING_11 PF17123.5 NODE_51770_length_348_cov_123.038339_g43856_i0forward_frame_1 - 4.6e-06 26.3 0.2 1e-05 25.2 0.2 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 NODE_51770_length_348_cov_123.038339_g43856_i0forward_frame_1 - 9.5e-05 22.7 0.7 0.00015 22.0 0.7 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_51770_length_348_cov_123.038339_g43856_i0forward_frame_1 - 0.0013 18.6 1.1 0.0026 17.6 1.1 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_51770_length_348_cov_123.038339_g43856_i0forward_frame_1 - 0.0055 16.5 0.1 0.0055 16.5 0.1 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_51770_length_348_cov_123.038339_g43856_i0forward_frame_1 - 0.0074 16.5 2.6 0.018 15.3 2.0 2.0 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_51770_length_348_cov_123.038339_g43856_i0forward_frame_1 - 0.012 15.7 1.1 0.022 14.8 1.1 1.5 1 0 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_4 PF15227.6 NODE_51770_length_348_cov_123.038339_g43856_i0forward_frame_1 - 0.059 13.5 0.2 0.12 12.6 0.2 1.5 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING RRM_1 PF00076.22 NODE_51768_length_348_cov_147.345048_g43854_i0reverse_frame_1 - 0.0092 15.8 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF4387 PF14330.6 NODE_51756_length_349_cov_1.216561_g43842_i0reverse_frame_3 - 0.076 13.7 0.1 0.15 12.8 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4387) FlgH PF02107.16 NODE_51751_length_349_cov_1.665605_g43837_i0reverse_frame_2 - 0.12 12.0 0.1 0.15 11.6 0.1 1.1 1 0 0 1 1 1 0 Flagellar L-ring protein zf-UBR PF02207.20 NODE_51746_length_349_cov_1.926752_g43832_i0reverse_frame_3 - 0.15 12.2 0.2 0.15 12.2 0.2 1.5 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) DUF218 PF02698.17 NODE_51745_length_349_cov_1.949045_g43831_i0forward_frame_2 - 0.044 13.8 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 DUF218 domain DUF4131 PF13567.6 NODE_51745_length_349_cov_1.949045_g43831_i0forward_frame_2 - 1.9 8.1 5.4 2.7 7.6 4.6 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) Geminin PF07412.12 NODE_51744_length_349_cov_2.028662_g43830_i0reverse_frame_3 - 0.02 14.6 2.4 0.025 14.3 2.4 1.1 1 0 0 1 1 1 0 Geminin TelA PF05816.11 NODE_51744_length_349_cov_2.028662_g43830_i0reverse_frame_3 - 0.042 12.9 1.7 0.048 12.7 1.7 1.1 1 0 0 1 1 1 0 Toxic anion resistance protein (TelA) Mal_decarbox_Al PF16957.5 NODE_51744_length_349_cov_2.028662_g43830_i0forward_frame_3 - 0.22 9.8 0.1 0.26 9.6 0.1 1.0 1 0 0 1 1 1 0 Malonate decarboxylase, alpha subunit, transporter betaPIX_CC PF16523.5 NODE_51742_length_349_cov_2.085987_g43828_i0forward_frame_3 - 6 6.8 9.6 0.54 10.1 1.3 2.6 1 1 1 2 2 2 0 betaPIX coiled coil Csm1_N PF18504.1 NODE_51742_length_349_cov_2.085987_g43828_i0forward_frame_2 - 1.8 9.0 7.2 1.6 9.2 1.2 2.2 2 0 0 2 2 2 0 Csm1 N-terminal domain V_ATPase_I PF01496.19 NODE_51742_length_349_cov_2.085987_g43828_i0forward_frame_2 - 2.3 6.0 4.8 2.5 5.9 4.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF465 PF04325.13 NODE_51739_length_349_cov_2.156051_g43825_i0forward_frame_2 - 1.5e-14 53.7 1.4 2.3e-13 50.0 1.2 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF465) DUF4223 PF13978.6 NODE_51738_length_349_cov_2.242038_g43824_i0reverse_frame_2 - 6.9e-35 118.8 0.9 1e-34 118.2 0.9 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4223) CMD PF02627.20 NODE_51738_length_349_cov_2.242038_g43824_i0forward_frame_2 - 0.1 12.6 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Carboxymuconolactone decarboxylase family UPF0014 PF03649.13 NODE_51737_length_349_cov_2.251592_g43823_i0forward_frame_2 - 0.058 12.8 0.2 0.064 12.6 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0014) DUF3977 PF13122.6 NODE_51731_length_349_cov_2.614650_g43817_i0forward_frame_2 - 0.094 12.9 0.5 0.16 12.2 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3977) Arrestin_C PF02752.22 NODE_51730_length_349_cov_2.681529_g43816_i0reverse_frame_3 - 0.025 15.1 0.0 0.051 14.0 0.0 1.5 2 0 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain NAGLU PF05089.12 NODE_51730_length_349_cov_2.681529_g43816_i0reverse_frame_2 - 0.0086 15.1 0.2 0.011 14.8 0.2 1.1 1 0 0 1 1 1 1 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain APOBEC4_like PF18774.1 NODE_51730_length_349_cov_2.681529_g43816_i0reverse_frame_2 - 0.023 14.6 3.4 0.027 14.4 3.4 1.2 1 0 0 1 1 1 0 APOBEC4-like -AID/APOBEC-deaminase DUF3270 PF11674.8 NODE_51726_length_349_cov_3.057325_g43812_i0reverse_frame_2 - 8.2 6.7 9.1 6.4 7.0 7.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) Ribosomal_L37e PF01907.19 NODE_51723_length_349_cov_3.535032_g43809_i0reverse_frame_3 - 0.097 12.8 0.9 0.19 11.9 0.9 1.4 1 0 0 1 1 1 0 Ribosomal protein L37e APP_N PF02177.16 NODE_51723_length_349_cov_3.535032_g43809_i0reverse_frame_2 - 0.049 14.0 0.0 0.07 13.5 0.0 1.3 1 0 0 1 1 1 0 Amyloid A4 N-terminal heparin-binding Porphobil_deam PF01379.20 NODE_51720_length_349_cov_4.095541_g43806_i0reverse_frame_2 - 0.11 12.0 0.1 0.15 11.6 0.1 1.1 1 0 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain Beta-TrCP_D PF12125.8 NODE_51720_length_349_cov_4.095541_g43806_i0reverse_frame_2 - 0.25 11.3 0.2 0.25 11.3 0.2 1.7 2 0 0 2 2 2 0 D domain of beta-TrCP CHORD PF04968.12 NODE_51712_length_349_cov_33.455414_g43798_i0reverse_frame_2 - 2.9e-06 27.9 2.9 4.7e-06 27.2 2.9 1.3 1 0 0 1 1 1 1 CHORD KleE PF17394.2 NODE_51710_length_349_cov_36.856688_g43796_i0reverse_frame_3 - 8.7 6.6 8.1 3.2 8.0 5.3 1.7 1 1 1 2 2 2 0 Uncharacterized KleE stable inheritance protein DUF2737 PF10930.8 NODE_51709_length_349_cov_42.859873_g43795_i0forward_frame_2 - 0.082 12.5 0.3 0.13 11.9 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2737) Saf_2TM PF18303.1 NODE_51708_length_349_cov_62.127389_g43794_i0reverse_frame_2 - 0.16 11.6 0.8 0.22 11.1 0.8 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain CDC24 PF06395.11 NODE_51708_length_349_cov_62.127389_g43794_i0forward_frame_2 - 0.057 13.7 0.7 0.075 13.3 0.3 1.4 1 1 0 1 1 1 0 CDC24 Calponin RNA_polI_A34 PF08208.11 NODE_51707_length_349_cov_63.114650_g43793_i0forward_frame_3 - 0.26 11.4 16.5 0.33 11.0 16.5 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Amino_oxidase PF01593.24 NODE_51701_length_349_cov_71.369427_g43787_i0forward_frame_2 - 1.7e-23 83.6 0.2 2e-23 83.4 0.2 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DUF3080 PF11279.8 NODE_51699_length_349_cov_73.773885_g43785_i0forward_frame_3 - 0.077 12.2 0.6 0.1 11.8 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3080) HPP PF04982.13 NODE_51698_length_349_cov_77.261146_g43784_i0reverse_frame_3 - 2.1 8.6 8.2 3.7 7.7 8.2 1.5 1 1 0 1 1 1 0 HPP family DUF913 PF06025.12 NODE_51697_length_349_cov_77.901274_g43783_i0forward_frame_3 - 0.024 13.6 0.1 0.028 13.4 0.1 1.2 1 1 0 1 1 1 0 Domain of Unknown Function (DUF913) gpUL132 PF11359.8 NODE_51692_length_349_cov_90.353503_g43778_i0forward_frame_3 - 0.087 12.4 0.1 0.1 12.2 0.1 1.3 1 0 0 1 1 1 0 Glycoprotein UL132 ATP-synt_8 PF00895.20 NODE_51691_length_349_cov_90.538217_g43777_i0reverse_frame_3 - 2 8.9 7.5 19 5.8 2.6 2.6 2 1 1 3 3 3 0 ATP synthase protein 8 TssN PF17555.2 NODE_51689_length_349_cov_97.404459_g43775_i0forward_frame_2 - 0.046 13.1 5.0 0.051 13.0 5.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssN Nitr_red_bet_C PF14711.6 NODE_51681_length_349_cov_119.210191_g43767_i0reverse_frame_2 - 0.081 12.6 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Respiratory nitrate reductase beta C-terminal Umbravirus_LDM PF04817.12 NODE_51680_length_349_cov_137.385350_g43766_i0forward_frame_3 - 0.047 13.0 5.2 0.062 12.6 5.2 1.1 1 0 0 1 1 1 0 Umbravirus long distance movement (LDM) family SopA_C PF13979.6 NODE_51679_length_349_cov_161.525478_g43765_i0forward_frame_2 - 0.11 12.2 0.5 0.18 11.5 0.0 1.5 2 0 0 2 2 2 0 SopA-like catalytic domain DUF2505 PF10698.9 NODE_51679_length_349_cov_161.525478_g43765_i0forward_frame_2 - 0.13 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2505) Peptidase_C4 PF00863.19 NODE_51678_length_349_cov_165.684713_g43764_i0reverse_frame_2 - 0.035 13.4 0.1 0.035 13.4 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C4 L71 PF02448.15 NODE_51676_length_349_cov_185.082803_g43762_i0reverse_frame_2 - 0.049 14.0 0.8 0.36 11.3 0.0 2.0 1 1 1 2 2 2 0 L71 family Defensin_int PF17858.1 NODE_51672_length_349_cov_275.092357_g43758_i0reverse_frame_3 - 2.5 8.1 8.8 0.49 10.4 4.6 2.0 2 0 0 2 2 2 0 Platypus intermediate defensin-like peptide PEP-utilizers PF00391.23 NODE_51672_length_349_cov_275.092357_g43758_i0forward_frame_3 - 0.2 11.4 0.2 0.31 10.8 0.2 1.3 1 0 0 1 1 1 0 PEP-utilising enzyme, mobile domain Eapp_C PF10238.9 NODE_51671_length_349_cov_283.085987_g43757_i0reverse_frame_2 - 0.0012 18.9 0.4 0.0015 18.6 0.4 1.1 1 0 0 1 1 1 1 E2F-associated phosphoprotein Fer4_4 PF12800.7 NODE_51669_length_349_cov_345.267516_g43755_i0forward_frame_3 - 0.15 12.6 1.0 0.15 12.6 1.0 2.0 3 0 0 3 3 3 0 4Fe-4S binding domain NMO PF03060.15 NODE_51667_length_349_cov_390.563694_g43753_i0forward_frame_3 - 0.14 11.5 0.1 0.18 11.1 0.1 1.1 1 0 0 1 1 1 0 Nitronate monooxygenase PHF5 PF03660.14 NODE_51667_length_349_cov_390.563694_g43753_i0forward_frame_2 - 0.087 13.0 4.2 1.8 8.8 1.1 2.1 2 0 0 2 2 2 0 PHF5-like protein MORN PF02493.20 NODE_51661_length_350_cov_1.241270_g43747_i0reverse_frame_3 - 0.48 10.4 7.2 0.79 9.7 0.3 3.6 3 0 0 3 3 3 0 MORN repeat Abhydrolase_9_N PF15420.6 NODE_51658_length_350_cov_1.377778_g43744_i0forward_frame_3 - 0.019 15.0 0.1 0.021 14.8 0.1 1.1 1 0 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus DUF3937 PF13073.6 NODE_51653_length_350_cov_1.676190_g43739_i0reverse_frame_2 - 0.034 14.3 0.5 0.059 13.5 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3937) Thioredoxin_3 PF13192.6 NODE_51653_length_350_cov_1.676190_g43739_i0reverse_frame_2 - 0.16 12.0 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin domain Kinesin PF00225.23 NODE_51653_length_350_cov_1.676190_g43739_i0forward_frame_2 - 1.4e-20 73.5 0.5 1.6e-20 73.4 0.5 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_51653_length_350_cov_1.676190_g43739_i0forward_frame_2 - 0.00043 20.2 0.7 0.00064 19.7 0.7 1.4 1 1 0 1 1 1 1 Microtubule binding TetR_N PF00440.23 NODE_51651_length_350_cov_1.790476_g43737_i0forward_frame_2 - 1.5e-18 66.3 0.0 2.3e-18 65.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family UPF0122 PF04297.14 NODE_51651_length_350_cov_1.790476_g43737_i0forward_frame_2 - 0.1 12.8 0.0 0.15 12.3 0.0 1.5 1 1 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like Phage_TAC_6 PF09550.10 NODE_51649_length_350_cov_1.863492_g43735_i0reverse_frame_3 - 0.12 12.9 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC DUF2694 PF10904.8 NODE_51649_length_350_cov_1.863492_g43735_i0reverse_frame_2 - 0.14 12.3 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2694) IQ PF00612.27 NODE_51648_length_350_cov_1.987302_g43734_i0reverse_frame_2 - 7.4e-11 40.9 20.7 0.00044 19.8 1.0 4.4 4 0 0 4 4 4 4 IQ calmodulin-binding motif Nitrate_red_del PF02613.15 NODE_51647_length_350_cov_2.019048_g43733_i0reverse_frame_2 - 1.2e-15 57.7 0.3 1.7e-15 57.3 0.3 1.2 1 0 0 1 1 1 1 Nitrate reductase delta subunit FWWh PF14922.6 NODE_51641_length_350_cov_2.311111_g43727_i0forward_frame_3 - 0.092 12.7 0.5 0.12 12.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function Glyco_transf_8 PF01501.20 NODE_51640_length_350_cov_2.330159_g43726_i0reverse_frame_2 - 1.5e-23 83.7 0.8 1.6e-23 83.6 0.8 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 8 Glyco_transf_24 PF18404.1 NODE_51640_length_350_cov_2.330159_g43726_i0reverse_frame_2 - 0.001 18.5 0.2 0.0012 18.3 0.2 1.1 1 0 0 1 1 1 1 Glucosyltransferase 24 IMS PF00817.20 NODE_51634_length_350_cov_2.758730_g43720_i0reverse_frame_3 - 5e-26 91.5 0.0 5.6e-26 91.3 0.0 1.0 1 0 0 1 1 1 1 impB/mucB/samB family RibD_C PF01872.17 NODE_51634_length_350_cov_2.758730_g43720_i0reverse_frame_3 - 0.059 13.2 0.0 0.07 13.0 0.0 1.1 1 0 0 1 1 1 0 RibD C-terminal domain Mx_ML PF17536.2 NODE_51634_length_350_cov_2.758730_g43720_i0reverse_frame_2 - 0.11 12.2 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Matrix and Matrix long proteins N-terminal Pico_P2B PF01552.17 NODE_51633_length_350_cov_2.777778_g43719_i0forward_frame_2 - 0.086 13.0 0.6 0.13 12.5 0.6 1.3 1 0 0 1 1 1 0 Picornavirus 2B protein DUF1836 PF08876.11 NODE_51632_length_350_cov_2.812698_g43718_i0reverse_frame_2 - 0.022 14.8 2.4 0.025 14.6 2.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1836) DUF3270 PF11674.8 NODE_51632_length_350_cov_2.812698_g43718_i0forward_frame_3 - 4.4 7.5 7.9 4.1 7.6 6.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) SCP1201-deam PF14428.6 NODE_51631_length_350_cov_2.955556_g43717_i0reverse_frame_3 - 0.029 14.2 0.4 0.04 13.8 0.4 1.3 1 0 0 1 1 1 0 SCP1.201-like deaminase HHH_5 PF14520.6 NODE_51630_length_350_cov_3.082540_g43716_i0forward_frame_3 - 0.046 14.3 0.0 0.27 11.9 0.0 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain PP2C PF00481.21 NODE_51620_length_350_cov_52.365079_g43706_i0reverse_frame_2 - 4.1e-14 52.8 0.0 4.4e-14 52.7 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 NODE_51620_length_350_cov_52.365079_g43706_i0reverse_frame_2 - 0.081 12.8 0.0 0.081 12.8 0.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) CUT PF02376.15 NODE_51618_length_350_cov_56.139683_g43704_i0forward_frame_2 - 0.1 12.8 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 CUT domain Dishevelled PF02377.15 NODE_51615_length_350_cov_58.288889_g43701_i0forward_frame_2 - 0.092 13.2 3.2 0.13 12.8 3.2 1.1 1 0 0 1 1 1 0 Dishevelled specific domain Hepatitis_core PF00906.20 NODE_51615_length_350_cov_58.288889_g43701_i0forward_frame_2 - 0.15 11.6 2.4 0.19 11.2 2.4 1.1 1 0 0 1 1 1 0 Hepatitis core antigen DUF1623 PF07785.11 NODE_51614_length_350_cov_62.558730_g43700_i0reverse_frame_3 - 0.036 14.2 0.3 0.046 13.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1623) A2L_zn_ribbon PF08792.10 NODE_51614_length_350_cov_62.558730_g43700_i0reverse_frame_2 - 0.054 13.2 1.7 1.3 8.8 0.4 2.2 1 1 2 3 3 3 0 A2L zinc ribbon domain Ank_5 PF13857.6 NODE_51610_length_350_cov_72.133333_g43696_i0forward_frame_2 - 2.4e-17 62.8 0.3 2.1e-08 34.3 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_51610_length_350_cov_72.133333_g43696_i0forward_frame_2 - 4.4e-15 56.0 0.0 7.3e-15 55.3 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_51610_length_350_cov_72.133333_g43696_i0forward_frame_2 - 6.7e-14 51.6 0.0 3.3e-06 27.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 NODE_51610_length_350_cov_72.133333_g43696_i0forward_frame_2 - 1.1e-13 50.0 0.0 2.7e-06 27.3 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_51610_length_350_cov_72.133333_g43696_i0forward_frame_2 - 2.9e-10 40.5 0.0 9.2e-06 26.1 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) DUF2937 PF11157.8 NODE_51609_length_350_cov_73.784127_g43695_i0reverse_frame_2 - 0.041 13.6 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) DUF1997 PF09366.10 NODE_51600_length_350_cov_106.260317_g43686_i0forward_frame_2 - 0.072 13.2 0.1 0.097 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1997) DUF3819 PF12842.7 NODE_51598_length_350_cov_116.015873_g43684_i0forward_frame_3 - 0.12 12.4 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3819) L_HMGIC_fpl PF10242.9 NODE_51594_length_350_cov_134.926984_g43680_i0reverse_frame_3 - 0.2 11.8 0.0 0.28 11.4 0.0 1.1 1 0 0 1 1 1 0 Lipoma HMGIC fusion partner-like protein MIP PF00230.20 NODE_51592_length_350_cov_139.926984_g43678_i0forward_frame_3 - 7e-07 29.2 0.8 8.8e-07 28.9 0.8 1.2 1 0 0 1 1 1 1 Major intrinsic protein FixP_N PF14715.6 NODE_51591_length_350_cov_151.504762_g43677_i0reverse_frame_3 - 0.05 13.3 0.8 0.05 13.3 0.8 2.0 2 0 0 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP zf-Nse PF11789.8 NODE_51587_length_350_cov_178.180952_g43673_i0forward_frame_2 - 0.022 14.5 0.5 0.45 10.4 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit Stc1 PF12898.7 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_3 - 0.0043 17.6 0.1 0.49 11.0 0.0 2.3 2 1 0 2 2 2 2 Stc1 domain RCC1_2 PF13540.6 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 6e-07 29.1 2.3 0.11 12.4 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.001 19.3 1.5 1 9.8 0.0 2.8 1 1 2 3 3 3 2 TFIIH p62 subunit, N-terminal domain FtsQ PF03799.15 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.026 15.3 0.0 1 10.2 0.0 2.2 1 1 1 2 2 2 0 Cell division protein FtsQ XRCC1_N PF01834.16 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.03 14.3 0.3 1.8 8.6 0.1 2.0 1 1 1 2 2 2 0 XRCC1 N terminal domain Lipocalin_7 PF14651.6 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.068 13.1 0.7 3 7.8 0.1 2.1 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family DUF155 PF02582.14 NODE_51585_length_350_cov_238.701587_g43671_i0reverse_frame_2 - 0.1 12.7 0.7 9.5 6.3 0.0 2.7 2 1 1 3 3 3 0 Uncharacterised ACR, YagE family COG1723 DUF5408 PF17402.2 NODE_51585_length_350_cov_238.701587_g43671_i0forward_frame_3 - 8.7 6.3 7.9 14 5.7 0.2 3.1 3 0 0 3 3 3 0 Family of unknown function (DUF5408) YopH_N PF09013.10 NODE_51574_length_351_cov_1.392405_g43661_i0forward_frame_3 - 0.0055 17.0 0.1 0.0069 16.6 0.1 1.3 1 0 0 1 1 1 1 YopH, N-terminal DUF2373 PF10180.9 NODE_51574_length_351_cov_1.392405_g43661_i0forward_frame_3 - 0.019 14.8 0.8 0.037 13.9 0.1 1.8 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2373) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks227.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks227.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks227.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks227.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HECT PF00632.25 NODE_51567_length_351_cov_1.870253_g43654_i0reverse_frame_2 - 2.3e-08 33.9 0.0 3.3e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) BA14K PF07886.11 NODE_51565_length_351_cov_1.946203_g43652_i0reverse_frame_2 - 0.44 10.5 3.9 0.75 9.7 3.9 1.4 1 0 0 1 1 1 0 BA14K-like protein GST_C PF00043.25 NODE_51565_length_351_cov_1.946203_g43652_i0forward_frame_3 - 9.9e-05 22.5 0.0 0.00018 21.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 NODE_51565_length_351_cov_1.946203_g43652_i0forward_frame_3 - 0.034 14.3 0.0 0.057 13.6 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 NODE_51565_length_351_cov_1.946203_g43652_i0forward_frame_3 - 0.11 12.5 0.0 0.63 10.1 0.0 2.1 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Streptin-Immun PF11083.8 NODE_51565_length_351_cov_1.946203_g43652_i0forward_frame_3 - 0.14 12.6 0.6 5.1 7.6 0.1 2.4 1 1 1 2 2 2 0 Lantibiotic streptin immunity protein DUF410 PF04190.13 NODE_51564_length_351_cov_1.958861_g43651_i0reverse_frame_3 - 3.9e-06 26.9 0.3 4.2e-06 26.8 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF410) ANAPC3 PF12895.7 NODE_51564_length_351_cov_1.958861_g43651_i0reverse_frame_3 - 0.03 14.6 0.7 0.041 14.1 0.5 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 PK PF00224.21 NODE_51564_length_351_cov_1.958861_g43651_i0reverse_frame_3 - 0.13 11.2 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 Pyruvate kinase, barrel domain Cu2_monooxygen PF01082.20 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_3 - 0.1 12.8 1.7 0.12 12.6 1.1 1.4 1 1 1 2 2 2 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain Ank PF00023.30 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 4.6e-16 58.5 0.1 3.7e-07 30.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 5.4e-15 54.0 0.2 2.2e-06 27.6 0.1 2.4 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 1.9e-14 53.8 0.1 9.8e-14 51.5 0.1 2.0 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 2e-14 53.9 0.0 3.3e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_51563_length_351_cov_1.962025_g43650_i0forward_frame_2 - 3.7e-12 46.2 0.4 3.3e-06 27.2 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) DUF5564 PF17719.1 NODE_51554_length_351_cov_2.496835_g43641_i0reverse_frame_3 - 0.21 11.7 2.1 0.33 11.1 2.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5564) Antimicrobial18 PF08130.11 NODE_51553_length_351_cov_2.496835_g43640_i0forward_frame_3 - 0.031 14.4 4.6 0.048 13.8 4.6 1.3 1 0 0 1 1 1 0 Type A lantibiotic family NS3 PF17530.2 NODE_51553_length_351_cov_2.496835_g43640_i0forward_frame_2 - 0.04 13.5 1.0 0.043 13.4 1.0 1.1 1 0 0 1 1 1 0 Non-structural protein NS3 7TM_GPCR_Srj PF10319.9 NODE_51551_length_351_cov_2.829114_g43638_i0reverse_frame_2 - 0.036 13.4 0.8 0.039 13.3 0.8 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srj Lamprin PF06403.11 NODE_51548_length_351_cov_2.968354_g43635_i0forward_frame_2 - 0.00099 19.1 19.5 0.0023 17.9 2.8 2.2 1 1 1 2 2 2 2 Lamprin DX PF01666.17 NODE_51545_length_351_cov_3.265823_g43632_i0reverse_frame_2 - 0.014 15.8 0.8 0.019 15.4 0.8 1.3 1 0 0 1 1 1 0 DX module DUF1540 PF07561.11 NODE_51545_length_351_cov_3.265823_g43632_i0forward_frame_3 - 0.096 13.0 2.4 0.52 10.6 2.4 2.0 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1540) Spem1 PF15670.5 NODE_51543_length_351_cov_3.424051_g43630_i0forward_frame_2 - 5.2 6.6 7.8 6.3 6.3 7.8 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 Phage_Orf51 PF06194.11 NODE_51541_length_351_cov_3.642405_g43628_i0forward_frame_2 - 0.12 12.4 0.2 0.17 11.9 0.2 1.3 1 0 0 1 1 1 0 Phage Conserved Open Reading Frame 51 Rpr2 PF04032.16 NODE_51540_length_351_cov_4.177215_g43627_i0reverse_frame_3 - 1.8 8.9 7.1 0.093 13.0 1.3 1.8 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Dus PF01207.17 NODE_51540_length_351_cov_4.177215_g43627_i0forward_frame_2 - 6.1e-20 71.5 0.0 6.9e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) Eclosion PF04736.12 NODE_51539_length_351_cov_4.189873_g43626_i0forward_frame_3 - 0.48 10.1 5.7 0.66 9.7 1.4 2.6 1 1 1 2 2 2 0 Eclosion hormone Fer2 PF00111.27 NODE_51538_length_351_cov_4.341772_g43625_i0forward_frame_2 - 0.0039 17.1 1.5 0.0076 16.2 1.5 1.5 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain zf-RING_6 PF14835.6 NODE_51528_length_351_cov_71.832278_g43615_i0forward_frame_3 - 0.37 10.7 5.8 3.9 7.4 0.3 2.2 1 1 1 2 2 2 0 zf-RING of BARD1-type protein DUF2179 PF10035.9 NODE_51526_length_351_cov_74.439873_g43613_i0forward_frame_3 - 0.21 11.4 0.0 0.33 10.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) DUF3985 PF13153.6 NODE_51526_length_351_cov_74.439873_g43613_i0forward_frame_2 - 0.79 9.8 5.2 0.34 11.0 2.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3985) DUF2723 PF11028.8 NODE_51524_length_351_cov_78.174051_g43611_i0reverse_frame_3 - 0.075 13.0 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) Choline_transpo PF04515.12 NODE_51524_length_351_cov_78.174051_g43611_i0reverse_frame_2 - 8.2e-05 22.0 0.2 9.3e-05 21.8 0.2 1.1 1 0 0 1 1 1 1 Plasma-membrane choline transporter MAGE_N PF12440.8 NODE_51520_length_351_cov_82.645570_g43607_i0reverse_frame_2 - 0.81 10.4 11.2 0.6 10.8 4.0 2.1 2 0 0 2 2 2 0 Melanoma associated antigen family N terminal cobW PF02492.19 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 3.7e-08 33.2 0.1 5.9e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.0029 17.9 0.2 0.011 16.0 0.1 1.7 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.0049 16.8 0.0 0.007 16.3 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase TsaE PF02367.17 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.0065 16.5 0.0 0.0089 16.0 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE MMR_HSR1 PF01926.23 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.029 14.5 0.0 0.053 13.6 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase T2SSE PF00437.20 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.03 13.4 0.0 0.03 13.4 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein ABC_tran PF00005.27 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.043 14.3 0.0 0.073 13.6 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_18 PF13238.6 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.051 14.1 0.1 0.11 13.0 0.1 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.055 12.7 0.0 0.085 12.1 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin TrwB_AAD_bind PF10412.9 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.075 11.9 0.0 0.098 11.5 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_14 PF13173.6 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.086 12.9 0.2 0.13 12.3 0.2 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.09 12.5 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.1 13.0 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.12 12.2 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 NACHT domain AAA_28 PF13521.6 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.12 12.6 0.1 2.7 8.2 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 NODE_51519_length_351_cov_83.028481_g43606_i0reverse_frame_2 - 0.16 11.7 0.1 0.23 11.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain DUF5551 PF17705.1 NODE_51517_length_351_cov_89.392405_g43604_i0forward_frame_3 - 0.02 14.6 0.1 0.027 14.1 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5551) THEG4 PF15834.5 NODE_51516_length_351_cov_90.797468_g43603_i0reverse_frame_3 - 0.068 13.2 0.0 0.086 12.8 0.0 1.1 1 0 0 1 1 1 0 Testis highly expressed protein 4 ECSCR PF15820.5 NODE_51510_length_351_cov_101.313291_g43597_i0forward_frame_2 - 1.4 8.8 6.1 1.3 8.9 4.9 1.6 1 1 1 2 2 2 0 Endothelial cell-specific chemotaxis regulator Ribosomal_L39 PF00832.20 NODE_51506_length_351_cov_134.433544_g43593_i0reverse_frame_2 - 7.2e-20 70.3 7.6 1.2e-19 69.6 7.6 1.4 1 0 0 1 1 1 1 Ribosomal L39 protein PSA_CBD PF18341.1 NODE_51506_length_351_cov_134.433544_g43593_i0reverse_frame_2 - 0.045 13.8 0.6 0.097 12.7 0.6 1.6 1 0 0 1 1 1 0 PSA endolysin C-terminal cell wall binding domain DUF4516 PF14990.6 NODE_51501_length_351_cov_184.379747_g43588_i0reverse_frame_2 - 1e-09 38.0 1.0 1.7e-09 37.2 1.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4516) DUF1724 PF08350.10 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_3 - 0.027 14.6 0.2 34 4.7 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF1724) HCV_NS5a_1a PF08300.13 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_2 - 0.0043 17.1 0.4 0.034 14.3 0.0 2.3 2 1 1 3 3 3 1 Hepatitis C virus non-structural 5a zinc finger domain TcpQ PF10671.9 NODE_51500_length_351_cov_241.708861_g43587_i0reverse_frame_2 - 0.93 9.7 7.6 0.96 9.6 0.0 2.9 2 1 1 3 3 3 0 Toxin co-regulated pilus biosynthesis protein Q HXXSHH PF07586.11 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_3 - 0.02 14.5 1.4 0.91 9.0 0.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1552) Engrail_1_C_sig PF10525.9 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_3 - 0.071 12.3 0.3 51 3.2 0.0 3.1 3 0 0 3 3 3 0 Engrailed homeobox C-terminal signature domain CLIP_SPH_mas PF18398.1 NODE_51500_length_351_cov_241.708861_g43587_i0forward_frame_2 - 0.064 13.7 8.1 5.9 7.4 0.2 3.3 2 1 1 3 3 3 0 Clip-domain serine protease homolog masquerade Mu-conotoxin PF05374.12 NODE_51497_length_351_cov_454.572785_g43584_i0reverse_frame_3 - 0.0059 16.6 1.0 0.0059 16.6 1.0 2.5 2 0 0 2 2 2 1 Mu-Conotoxin Mito_fiss_reg PF05308.11 NODE_51497_length_351_cov_454.572785_g43584_i0reverse_frame_2 - 5.5 7.0 5.0 6.1 6.9 5.0 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 NODE_51497_length_351_cov_454.572785_g43584_i0reverse_frame_2 - 5.8 6.3 10.3 7.5 5.9 10.3 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Keratin_assoc PF09775.9 NODE_51489_length_351_cov_61498.658228_g43577_i0reverse_frame_2 - 0.0059 16.3 3.2 0.0059 16.3 3.2 1.4 2 0 0 2 2 2 1 Keratinocyte-associated protein 2 DDDD PF10161.9 ORF99214 - 0.3 10.9 3.3 2.9 7.7 0.4 2.2 2 0 0 2 2 2 0 Putative mitochondrial precursor protein DUF3602 PF12223.8 ORF98923 - 0.12 13.0 1.5 0.19 12.4 1.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3602) SF-assemblin PF06705.11 ORF97780 - 0.063 12.6 0.1 0.082 12.2 0.1 1.1 1 0 0 1 1 1 0 SF-assemblin/beta giardin Ras PF00071.22 ORF97234 - 8.4e-33 113.3 0.2 9.2e-33 113.1 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF97234 - 1.4e-18 67.2 0.1 1.7e-18 67.0 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF97234 - 1.4e-05 24.6 0.1 1.5e-05 24.5 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF97234 - 0.0045 16.5 0.0 0.0054 16.3 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Strabismus PF06638.11 ORF96699 - 5.9 5.4 6.4 2.9 6.4 2.6 1.8 1 1 1 2 2 2 0 Strabismus protein Herpes_UL6 PF01763.16 ORF96698 - 0.00038 19.1 0.3 0.0004 19.0 0.3 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like DUF234 PF03008.14 ORF96698 - 0.015 15.7 0.3 0.026 14.9 0.3 1.4 1 0 0 1 1 1 0 Archaea bacterial proteins of unknown function GLTSCR1 PF15249.6 ORF96698 - 0.078 13.4 0.8 15 6.1 0.0 2.2 2 0 0 2 2 2 0 Conserved region of unknown function on GLTSCR protein HPIP_like PF18524.1 ORF96410 - 0.24 11.2 2.9 5.7 6.8 0.0 3.0 4 0 0 4 4 4 0 High potential iron-sulfur protein like zf-nanos PF05741.13 ORF96410 - 1.6 9.0 5.7 3.6 7.9 0.7 2.4 2 0 0 2 2 2 0 Nanos RNA binding domain AAA_21 PF13304.6 ORF96171 - 4.1e-08 33.4 0.0 6.4e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF96171 - 0.00011 22.8 0.3 0.0024 18.4 0.0 2.0 2 0 0 2 2 2 1 ABC transporter KdpD PF02702.17 ORF96171 - 0.022 14.3 0.1 0.074 12.5 0.0 1.7 1 1 1 2 2 2 0 Osmosensitive K+ channel His kinase sensor domain SbcCD_C PF13558.6 ORF96171 - 0.14 12.4 0.0 0.65 10.3 0.0 1.9 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF96171 - 0.14 11.6 0.0 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain IFNGR1 PF07140.11 ORF95919 - 0.051 13.7 0.2 0.056 13.5 0.2 1.1 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) ScdA_N PF04405.14 ORF95177 - 0.069 12.8 0.2 0.19 11.4 0.2 1.7 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) FWWh PF14922.6 ORF95127 - 0.053 13.5 1.4 0.057 13.3 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function Pro_CA PF00484.19 ORF93497 - 2.9e-13 50.4 0.0 3.3e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 Carbonic anhydrase H_kinase_N PF12282.8 ORF93497 - 0.043 13.8 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 Signal transduction histidine kinase IL4Ra_N PF09238.10 ORF9173 - 0.0088 16.4 0.5 0.011 16.1 0.5 1.3 1 0 0 1 1 1 1 Interleukin-4 receptor alpha chain, N-terminal Apocytochr_F_C PF01333.19 ORF89814 - 8.3e-08 32.3 0.2 1.1e-07 31.9 0.2 1.2 1 0 0 1 1 1 1 Apocytochrome F, C-terminal DUF4120 PF13496.6 ORF89006 - 0.019 15.3 0.2 2.9 8.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) Telomere_Sde2_2 PF13297.6 ORF87835 - 0.0074 15.9 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Telomere stability C-terminal Pkinase PF00069.25 ORF8745 - 8.7e-17 61.3 0.0 1.1e-16 61.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF8745 - 2e-08 33.8 0.0 2.4e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF8745 - 0.0025 17.2 0.0 0.0031 16.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like FTO_CTD PF12934.7 ORF87438 - 0.0065 16.2 0.1 0.0086 15.8 0.1 1.2 1 1 0 1 1 1 1 FTO C-terminal domain Cu2_monooxygen PF01082.20 ORF86319 - 0.17 12.1 2.6 0.61 10.3 0.2 2.1 1 1 1 2 2 2 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain Pox_P21 PF05313.12 ORF86241 - 0.017 14.7 13.0 0.02 14.5 13.0 1.1 1 0 0 1 1 1 0 Poxvirus P21 membrane protein BPD_transp_1 PF00528.22 ORF85133 - 2.4e-27 95.9 3.3 2.6e-27 95.7 3.3 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BC10 PF06726.12 ORF8453 - 0.51 10.6 3.4 2.8 8.2 0.3 2.4 1 1 1 2 2 2 0 Bladder cancer-related protein BC10 DUF3874 PF12990.7 ORF84264 - 0.0037 17.6 0.0 0.0054 17.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknonw function from B. Theta Gene description (DUF3874) IES5 PF17335.2 ORF83357 - 0.025 14.9 1.1 0.034 14.4 1.1 1.1 1 0 0 1 1 1 0 Ino80 complex subunit 5 EF-hand_1 PF00036.32 ORF83295 - 6e-21 72.4 7.9 2.6e-07 29.7 0.6 3.3 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF83295 - 1.2e-18 67.3 3.6 4.1e-13 49.6 0.4 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF83295 - 1.3e-16 60.2 7.8 3.6e-10 39.5 0.1 3.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF83295 - 1.1e-14 53.0 6.5 6e-05 22.7 0.1 3.7 3 1 1 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 ORF83295 - 4.1e-09 35.5 9.6 0.00051 19.4 0.5 3.7 3 1 0 3 3 3 3 EF hand EF-hand_9 PF14658.6 ORF83295 - 1.2e-07 31.9 0.3 4.1e-06 27.0 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain AAA_assoc_C PF09821.9 ORF83295 - 0.014 15.9 0.1 0.13 12.7 0.1 2.0 2 0 0 2 2 2 0 C-terminal AAA-associated domain DUF3008 PF11450.8 ORF83295 - 0.031 14.4 0.0 0.031 14.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknwon function (DUF3008) LETM1 PF07766.13 ORF83295 - 0.038 13.3 0.2 0.061 12.7 0.2 1.4 1 1 0 1 1 1 0 LETM1-like protein SUB1_ProdP9 PF18213.1 ORF83295 - 0.044 13.6 0.3 0.11 12.4 0.1 1.7 1 1 0 2 2 2 0 SUB1 protease Prodomain ProdP9 DUF853 PF05872.12 ORF83295 - 0.057 12.0 0.0 0.065 11.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) FlgD PF03963.14 ORF83295 - 0.066 13.5 0.3 1.3 9.4 0.1 2.2 2 0 0 2 2 2 0 Flagellar hook capping protein - N-terminal region Myb_DNA-binding PF00249.31 ORF83272 - 2.3e-08 34.1 1.0 4.1e-08 33.3 1.0 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF83272 - 0.014 15.6 1.2 0.035 14.4 1.2 1.7 1 0 0 1 1 1 0 Myb-like DNA-binding domain CBF_beta PF02312.17 ORF83272 - 0.024 14.3 0.2 0.034 13.8 0.2 1.2 1 0 0 1 1 1 0 Core binding factor beta subunit Myb_DNA-bind_7 PF15963.5 ORF83272 - 0.037 13.9 1.2 0.058 13.3 0.1 1.9 3 0 0 3 3 3 0 Myb DNA-binding like Ntox27 PF15531.6 ORF83272 - 0.078 12.9 0.1 0.11 12.4 0.1 1.3 1 1 0 1 1 1 0 Bacterial toxin 27 EGF PF00008.27 ORF83171 - 0.097 13.0 5.1 0.097 13.0 5.1 2.2 2 1 0 2 2 2 0 EGF-like domain DUF4120 PF13496.6 ORF82718 - 0.019 15.3 0.2 2.9 8.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) DUF3874 PF12990.7 ORF82578 - 0.0037 17.6 0.0 0.0054 17.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknonw function from B. Theta Gene description (DUF3874) BTB_2 PF02214.22 ORF82402 - 0.08 13.3 0.3 0.12 12.8 0.3 1.2 1 0 0 1 1 1 0 BTB/POZ domain Ras PF00071.22 ORF82348 - 4.3e-38 130.5 0.8 4.8e-38 130.3 0.8 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF82348 - 5.7e-28 97.5 0.4 6.4e-28 97.4 0.4 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF82348 - 2.2e-11 43.5 0.5 2.5e-11 43.3 0.5 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF82348 - 2.6e-06 27.5 0.1 3e-06 27.3 0.1 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF82348 - 0.0001 21.8 0.1 0.00012 21.5 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF82348 - 0.001 18.5 0.0 0.0012 18.3 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit PduV-EutP PF10662.9 ORF82348 - 0.0016 18.2 0.2 0.0048 16.6 0.1 1.7 1 1 1 2 2 2 1 Ethanolamine utilisation - propanediol utilisation GTP_EFTU PF00009.27 ORF82348 - 0.0044 16.6 0.2 0.022 14.3 0.2 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain G-alpha PF00503.20 ORF82348 - 0.018 14.2 0.9 0.047 12.8 0.1 1.7 1 1 1 2 2 2 0 G-protein alpha subunit AAA_22 PF13401.6 ORF82348 - 0.12 12.7 0.1 0.12 12.6 0.1 1.3 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 ORF82348 - 0.13 11.7 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein DUF454 PF04304.13 ORF81164 - 1.2 9.1 5.1 1.6 8.8 2.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF454) DUF5024 PF16427.5 ORF80137 - 0.032 14.5 0.6 0.044 14.1 0.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5024) Flu_B_M2 PF04772.12 ORF80137 - 0.11 12.8 1.2 0.14 12.4 0.8 1.4 1 1 0 1 1 1 0 Influenza B matrix protein 2 (BM2) Herpes_gI PF01688.17 ORF79458 - 0.24 11.3 7.9 0.3 11.0 7.9 1.3 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein I DUF2826 PF11442.8 ORF79063 - 0.12 12.2 0.3 0.17 11.7 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2826) DUF4451 PF14616.6 ORF77971 - 0.028 14.6 0.3 0.032 14.4 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4451) DUF4266 PF14086.6 ORF77288 - 0.88 10.6 3.3 1.1 10.3 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4266) YL1 PF05764.13 ORF77288 - 1.4 9.0 11.5 1.6 8.8 11.5 1.0 1 0 0 1 1 1 0 YL1 nuclear protein FAM220 PF15487.6 ORF77288 - 9.3 5.8 13.5 11 5.6 13.5 1.0 1 0 0 1 1 1 0 FAM220 family EF-hand_7 PF13499.6 ORF77012 - 5.6e-05 23.5 4.5 0.00011 22.6 4.5 1.5 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF77012 - 0.00046 19.9 3.6 0.0011 18.7 0.8 2.7 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF77012 - 0.016 14.8 7.1 0.036 13.6 1.5 2.8 3 0 0 3 3 3 0 EF hand EF-hand_8 PF13833.6 ORF77012 - 0.19 11.6 7.9 2.1 8.3 0.4 2.7 2 1 0 2 2 2 0 EF-hand domain pair TIR-like PF10137.9 ORF76457 - 0.18 11.8 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Predicted nucleotide-binding protein containing TIR-like domain Calcipressin PF04847.12 ORF75849 - 0.096 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Calcipressin Inhibitor_I10 PF12559.8 ORF75703 - 0.032 14.5 0.0 0.097 12.9 0.0 1.7 2 0 0 2 2 2 0 Serine endopeptidase inhibitors Ada_Zn_binding PF02805.16 ORF75617 - 0.032 14.3 1.3 0.052 13.6 0.8 1.5 2 0 0 2 2 2 0 Metal binding domain of Ada Gemini_AL3 PF01407.17 ORF74744 - 0.027 14.3 0.2 0.032 14.1 0.2 1.2 1 0 0 1 1 1 0 Geminivirus AL3 protein Transferase PF02458.15 ORF74315 - 0.073 11.7 0.2 0.084 11.5 0.2 1.1 1 0 0 1 1 1 0 Transferase family DUF3789 PF12664.7 ORF7395 - 0.66 9.7 2.5 1.1 9.1 2.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3789) DUF2560 PF10834.8 ORF73893 - 0.14 12.4 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2560) Mit_ribos_Mrp51 PF11709.8 ORF73546 - 0.022 14.4 2.7 0.022 14.4 2.7 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit Gag_p17 PF00540.18 ORF73035 - 0.1 12.6 0.3 0.19 11.7 0.3 1.5 1 1 0 1 1 1 0 gag gene protein p17 (matrix protein) TraH PF06122.11 ORF72753 - 0.041 13.2 0.0 0.062 12.6 0.0 1.2 1 0 0 1 1 1 0 Conjugative relaxosome accessory transposon protein PP-binding PF00550.25 ORF72106 - 1.5e-07 31.6 0.1 1.9e-07 31.3 0.1 1.3 1 0 0 1 1 1 1 Phosphopantetheine attachment site DUF5484 PF17583.2 ORF72106 - 0.067 12.9 0.8 0.54 10.0 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5484) PP-binding_2 PF14573.6 ORF72106 - 0.081 13.2 1.8 0.22 11.7 0.1 1.9 1 1 0 2 2 2 0 Acyl-carrier SAA PF00277.18 ORF71322 - 0.058 13.9 0.0 0.069 13.6 0.0 1.1 1 0 0 1 1 1 0 Serum amyloid A protein PLL PF18587.1 ORF71000 - 0.085 13.0 0.7 0.13 12.4 0.7 1.3 1 0 0 1 1 1 0 PTX/LNS-Like (PLL) domain MORN PF02493.20 ORF70829 - 1.8e-16 59.0 21.5 3.4e-06 26.6 1.0 5.0 5 0 0 5 5 5 4 MORN repeat Peptidase_M2 PF01401.18 ORF70670 - 0.0053 15.5 0.7 0.0063 15.2 0.7 1.0 1 0 0 1 1 1 1 Angiotensin-converting enzyme DUF3907 PF13047.6 ORF70670 - 0.0061 16.5 0.0 0.0095 15.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3907) DDDD PF10161.9 ORF69503 - 0.3 10.9 3.3 2.9 7.7 0.4 2.2 2 0 0 2 2 2 0 Putative mitochondrial precursor protein RAD51_interact PF15696.5 ORF68553 - 0.024 14.7 0.0 0.045 13.9 0.0 1.5 1 0 0 1 1 1 0 RAD51 interacting motif DUF3716 PF12511.8 ORF68553 - 0.044 13.8 1.6 0.075 13.1 1.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) SUB1_ProdP9 PF18213.1 ORF68064 - 0.16 11.8 5.4 0.048 13.5 1.5 2.0 2 1 0 2 2 2 0 SUB1 protease Prodomain ProdP9 Tctex-1 PF03645.13 ORF68055 - 1.7e-22 79.6 2.2 2e-22 79.4 2.2 1.1 1 0 0 1 1 1 1 Tctex-1 family zf-Mss51 PF13824.6 ORF67580 - 0.0051 16.9 2.0 0.0096 16.0 2.0 1.6 1 1 0 1 1 1 1 Zinc-finger of mitochondrial splicing suppressor 51 BolA PF01722.18 ORF66912 - 8.6e-29 99.6 0.3 1e-28 99.4 0.3 1.1 1 0 0 1 1 1 1 BolA-like protein UPF0047 PF01894.17 ORF66912 - 0.03 14.5 0.0 0.049 13.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0047 DALR_2 PF09190.11 ORF6636 - 2e-24 85.8 3.7 1.1e-23 83.4 0.9 2.1 2 0 0 2 2 2 1 DALR domain DUF5327 PF17261.2 ORF6636 - 0.018 15.8 0.1 0.021 15.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5327) EF-1_beta_acid PF10587.9 ORF6636 - 3.6 8.1 8.5 2 8.9 1.6 2.5 2 0 0 2 2 2 0 Eukaryotic elongation factor 1 beta central acidic region RAP PF08373.10 ORF65631 - 1.7e-05 24.8 0.8 3.2e-05 23.9 0.8 1.5 1 0 0 1 1 1 1 RAP domain Pkinase PF00069.25 ORF64782 - 8.7e-17 61.3 0.0 1.1e-16 61.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF64782 - 2e-08 33.8 0.0 2.4e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF64782 - 0.0025 17.2 0.0 0.0031 16.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Corona_M PF01635.18 ORF64608 - 0.13 11.5 2.7 0.17 11.2 2.7 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein Thioredoxin_4 PF13462.6 ORF64255 - 0.033 14.4 0.0 0.051 13.7 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin Ac76 PF05814.11 ORF64002 - 0.031 14.3 0.5 0.042 13.9 0.5 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) Phage_lysis PF03245.13 ORF63407 - 0.1 12.7 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage Rz lysis protein Pro_isomerase PF00160.21 ORF63361 - 2.9e-33 115.4 0.0 3.3e-33 115.2 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF4891 PF16232.5 ORF63361 - 0.13 12.8 0.0 0.19 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4891) zf-LITAF-like PF10601.9 ORF63000 - 0.026 14.8 0.6 0.026 14.8 0.6 1.5 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Cu2_monooxygen PF01082.20 ORF6297 - 0.17 12.1 2.6 0.61 10.3 0.2 2.1 1 1 1 2 2 2 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain EzrA PF06160.12 ORF62628 - 0.011 13.9 1.6 0.012 13.8 1.6 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA XRCC4 PF06632.12 ORF62628 - 0.028 13.3 1.6 0.038 12.8 1.6 1.3 1 1 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 ArdA PF07275.11 ORF62628 - 0.076 13.6 0.1 0.087 13.4 0.1 1.2 1 0 0 1 1 1 0 Antirestriction protein (ArdA) COPI_assoc PF08507.10 ORF62370 - 3.6e-06 27.1 3.1 3.9e-06 27.0 3.1 1.1 1 0 0 1 1 1 1 COPI associated protein FA_desaturase PF00487.24 ORF62370 - 0.0084 16.0 0.2 0.0084 16.0 0.2 1.0 1 0 0 1 1 1 1 Fatty acid desaturase Corona_M PF01635.18 ORF62324 - 0.13 11.5 2.7 0.17 11.2 2.7 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein CitF PF04223.12 ORF61130 - 0.073 11.9 0.0 0.08 11.8 0.0 1.1 1 0 0 1 1 1 0 Citrate lyase, alpha subunit (CitF) DUF3311 PF11755.8 ORF60673 - 1.6 8.7 4.8 3.9 7.5 0.9 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3311) Swm2 PF17083.5 ORF59808 - 0.056 13.4 2.0 0.073 13.1 2.0 1.1 1 0 0 1 1 1 0 Nucleolar protein Swm2 Ig_Tie2_1 PF10430.9 ORF59808 - 0.062 13.7 0.2 0.098 13.1 0.2 1.3 1 0 0 1 1 1 0 Tie-2 Ig-like domain 1 ATP-synt_C PF00137.21 ORF57645 - 1.6 9.1 5.4 6.9 7.1 1.0 2.6 2 1 0 2 2 2 0 ATP synthase subunit C Corona_M PF01635.18 ORF5602 - 0.13 11.5 2.7 0.17 11.2 2.7 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein SSP160 PF06933.11 ORF55712 - 0.28 9.3 1.9 0.33 9.1 1.9 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 P5CR_dimer PF14748.6 ORF55365 - 3.3e-35 120.4 0.9 3.7e-35 120.3 0.9 1.0 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation ubiquitin PF00240.23 ORF5516 - 3e-05 23.7 0.0 0.051 13.3 0.0 2.2 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD_2 PF13881.6 ORF5516 - 0.17 12.0 0.1 0.34 11.0 0.1 1.6 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like YukD PF08817.10 ORF5516 - 0.2 12.4 0.0 0.38 11.5 0.0 1.4 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD Beta-lactamase2 PF13354.6 ORF54 - 0.071 12.7 0.0 0.081 12.5 0.0 1.1 1 0 0 1 1 1 0 Beta-lactamase enzyme family Levi_coat PF01819.17 ORF5146 - 0.046 13.7 0.8 0.083 12.9 0.2 1.6 2 1 0 2 2 2 0 Levivirus coat protein Acyl-thio_N PF12590.8 ORF50727 - 0.013 16.1 1.5 0.016 15.8 1.5 1.1 1 0 0 1 1 1 0 Acyl-ATP thioesterase PP-binding PF00550.25 ORF5067 - 4.6e-07 30.1 0.1 5.7e-07 29.8 0.1 1.3 1 0 0 1 1 1 1 Phosphopantetheine attachment site DUF5484 PF17583.2 ORF5067 - 0.067 12.9 0.8 0.54 10.0 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5484) MORN PF02493.20 ORF49309 - 1.9e-11 43.2 17.5 3.2e-06 26.7 1.3 4.3 4 0 0 4 4 4 3 MORN repeat zf-RING_7 PF02591.15 ORF47404 - 0.55 10.5 0.2 0.55 10.5 0.2 2.5 3 0 0 3 3 3 0 C4-type zinc ribbon domain DUF3836 PF12930.7 ORF47379 - 0.013 15.3 2.5 0.018 14.8 2.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF3836) FixS PF03597.15 ORF47379 - 0.14 11.9 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type Dimerisation PF08100.11 ORF44155 - 0.22 11.6 1.2 2.6 8.1 0.1 2.6 2 1 1 3 3 3 0 Dimerisation domain DDE_Tnp_IS66 PF03050.14 ORF43118 - 0.41 10.1 8.3 0.49 9.8 8.3 1.1 1 0 0 1 1 1 0 Transposase IS66 family Ac76 PF05814.11 ORF4259 - 0.031 14.3 0.5 0.042 13.9 0.5 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) DUF3396 PF11876.8 ORF41873 - 0.19 11.2 0.0 0.21 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3396) DUF4320 PF14208.6 ORF40957 - 0.14 12.3 0.1 0.32 11.1 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4320) RNA_pol_Rpb1_6 PF04992.14 ORF38425 - 0.028 14.2 0.3 0.031 14.1 0.3 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 6 Thioredox_DsbH PF03190.15 ORF37945 - 0.021 14.8 0.0 0.023 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF255 Levi_coat PF01819.17 ORF37115 - 0.046 13.7 0.8 0.083 12.9 0.2 1.6 2 1 0 2 2 2 0 Levivirus coat protein Circo_capsid PF02443.15 ORF37078 - 0.053 13.1 19.3 0.067 12.8 19.3 1.3 1 0 0 1 1 1 0 Circovirus capsid protein DUF4834 PF16118.5 ORF33956 - 0.48 11.4 4.4 0.54 11.3 4.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Spt20 PF12090.8 ORF33956 - 3.8 7.1 20.2 4.1 6.9 20.2 1.1 1 0 0 1 1 1 0 Spt20 family TFIIA PF03153.13 ORF33956 - 6.2 6.7 18.3 6.8 6.6 18.3 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit zf-LITAF-like PF10601.9 ORF33376 - 0.026 14.8 0.6 0.026 14.8 0.6 1.5 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain TMEM138 PF14935.6 ORF32334 - 0.012 16.2 5.4 0.016 15.8 5.2 1.3 1 1 0 1 1 1 0 Transmembrane protein 138 Ac76 PF05814.11 ORF32334 - 0.027 14.5 0.9 0.036 14.1 0.9 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) Orf78 PF06024.12 ORF32334 - 0.2 12.0 5.9 0.27 11.6 5.9 1.2 1 0 0 1 1 1 0 Orf78 (ac78) Insulin_TMD PF17870.1 ORF32334 - 0.2 11.7 11.8 0.27 11.3 11.8 1.2 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Myticin-prepro PF10690.9 ORF32334 - 0.33 11.2 2.4 0.46 10.8 2.4 1.2 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Tmemb_9 PF05434.11 ORF32334 - 0.4 10.6 4.7 0.45 10.4 4.7 1.1 1 0 0 1 1 1 0 TMEM9 EVI2A PF05399.11 ORF32334 - 0.68 9.5 4.1 0.77 9.3 4.1 1.1 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) DUF929 PF06053.11 ORF32334 - 1 8.6 6.6 1.1 8.5 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) DUF515 PF04415.12 ORF32334 - 3.9 5.8 5.6 4.5 5.5 5.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Synaptobrevin PF00957.21 ORF32334 - 7.1 6.5 7.6 12 5.8 7.6 1.4 1 0 0 1 1 1 0 Synaptobrevin Y_Y_Y PF07495.13 ORF30959 - 0.022 14.7 0.0 0.035 14.1 0.0 1.4 1 0 0 1 1 1 0 Y_Y_Y domain TcfC PF16967.5 ORF30959 - 0.16 11.5 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 E-set like domain Trehalase PF01204.18 ORF3089 - 0.43 9.4 0.5 0.58 8.9 0.5 1.1 1 0 0 1 1 1 0 Trehalase DIX PF00778.17 ORF30263 - 0.07 13.0 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 DIX domain PAP_central PF04928.17 ORF29861 - 2.5e-05 23.4 0.0 2.6e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 Poly(A) polymerase central domain NTP_transf_2 PF01909.23 ORF29861 - 0.0012 19.1 0.0 0.0022 18.3 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain Alpha-amyl_C2 PF07821.12 ORF29689 - 0.029 14.6 0.0 0.2 11.9 0.0 2.0 1 1 0 1 1 1 0 Alpha-amylase C-terminal beta-sheet domain DUF5332 PF17266.2 ORF29473 - 0.047 13.4 0.4 0.063 13.0 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5332) Tax PF02959.16 ORF29473 - 0.13 11.7 0.2 0.16 11.4 0.2 1.1 1 0 0 1 1 1 0 HTLV Tax 7tm_1 PF00001.21 ORF27603 - 0.00075 18.9 3.8 0.00094 18.6 3.8 1.0 1 0 0 1 1 1 1 7 transmembrane receptor (rhodopsin family) 7tm_7 PF08395.12 ORF27603 - 0.0017 17.6 6.2 0.0019 17.4 6.2 1.0 1 0 0 1 1 1 1 7tm Chemosensory receptor Gemini_AC4_5 PF04807.12 ORF27603 - 0.17 11.6 1.6 0.72 9.6 0.1 2.5 2 0 0 2 2 2 0 Geminivirus AC4/5 conserved region UPF0270 PF06794.12 ORF26956 - 4.4e-16 58.7 0.0 6.1e-16 58.3 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0270) Cu_bind_like PF02298.17 ORF26956 - 0.024 14.6 0.2 0.054 13.5 0.1 1.5 2 0 0 2 2 2 0 Plastocyanin-like domain AChE_tetra PF08674.10 ORF25685 - 0.056 13.1 0.2 0.13 12.0 0.2 1.6 1 0 0 1 1 1 0 Acetylcholinesterase tetramerisation domain FRB_dom PF08771.11 ORF24884 - 0.11 12.9 0.3 0.18 12.3 0.3 1.4 1 1 0 1 1 1 0 FKBP12-rapamycin binding domain SpoIIID PF12116.8 ORF24884 - 0.17 12.0 2.6 0.29 11.2 2.1 1.8 1 1 0 1 1 1 0 Stage III sporulation protein D Orthopox_B11R PF07033.11 ORF23915 - 0.054 13.3 1.0 0.08 12.7 1.0 1.3 1 0 0 1 1 1 0 Orthopoxvirus B11R protein CAT PF00302.18 ORF23369 - 0.0031 17.5 0.2 0.0041 17.1 0.2 1.2 1 0 0 1 1 1 1 Chloramphenicol acetyltransferase Rad50_zn_hook PF04423.14 ORF2305 - 0.77 9.6 0.1 0.77 9.6 0.1 2.5 3 0 0 3 3 3 0 Rad50 zinc hook motif Phage_rep_org_N PF09681.10 ORF22321 - 0.00049 20.0 0.7 0.00066 19.6 0.7 1.3 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) DUF4393 PF14337.6 ORF22321 - 0.0018 18.1 1.7 0.0022 17.8 1.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4393) GrpE PF01025.19 ORF22321 - 0.041 13.6 0.6 0.052 13.2 0.6 1.1 1 0 0 1 1 1 0 GrpE Aminotran_1_2 PF00155.21 ORF21416 - 2.7e-09 36.7 0.0 3.2e-09 36.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DUF4128 PF13554.6 ORF21416 - 0.077 13.0 0.0 1.2 9.2 0.0 2.1 1 1 1 2 2 2 0 Bacteriophage related domain of unknown function HU-HIG PF18291.1 ORF21416 - 0.13 12.4 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 HU domain fused to wHTH, Ig, or Glycine-rich motif PKcGMP_CC PF16808.5 ORF21123 - 0.14 12.0 0.3 0.24 11.3 0.3 1.4 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase GGDEF_2 PF17853.1 ORF21113 - 0.081 13.2 0.2 0.16 12.2 0.0 1.6 2 0 0 2 2 2 0 GGDEF-like domain DUF2990 PF11693.8 ORF21032 - 0.1 12.8 0.2 0.17 12.1 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) DDE_Tnp_IS66 PF03050.14 ORF208 - 0.41 10.1 8.3 0.49 9.8 8.3 1.1 1 0 0 1 1 1 0 Transposase IS66 family NCD3G PF07562.14 ORF20469 - 0.02 14.9 0.9 0.02 14.9 0.9 1.7 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR Glyco_trans_1_4 PF13692.6 ORF20299 - 0.077 13.4 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 Gag_p17 PF00540.18 ORF20017 - 0.1 12.6 0.3 0.19 11.7 0.3 1.5 1 1 0 1 1 1 0 gag gene protein p17 (matrix protein) PAPA-1 PF04795.12 ORF19672 - 0.062 14.1 1.1 0.077 13.8 1.1 1.5 1 1 0 1 1 1 0 PAPA-1-like conserved region SSP160 PF06933.11 ORF19671 - 0.079 11.2 0.1 0.086 11.0 0.1 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 cNMP_binding PF00027.29 ORF19540 - 1.7e-08 34.4 0.1 4e-08 33.2 0.1 1.6 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain Transposase_1 PF01359.18 ORF18609 - 0.045 13.6 0.2 0.082 12.7 0.2 1.5 1 0 0 1 1 1 0 Transposase (partial DDE domain) PIP49_C PF12260.8 ORF18609 - 0.12 11.9 5.1 0.13 11.9 4.4 1.3 1 1 0 1 1 1 0 Protein-kinase domain of FAM69 MMPL PF03176.15 ORF18609 - 0.34 9.8 0.0 0.34 9.8 0.0 1.0 1 0 0 1 1 1 0 MMPL family FKS1_dom1 PF14288.6 ORF18108 - 0.0012 19.2 0.4 0.0015 18.9 0.4 1.1 1 0 0 1 1 1 1 1,3-beta-glucan synthase subunit FKS1, domain-1 Zein-binding PF04576.15 ORF18108 - 0.047 14.0 0.9 0.089 13.1 0.6 1.6 1 1 0 1 1 1 0 Zein-binding PIGA PF08288.12 ORF17430 - 0.036 14.7 0.2 0.046 14.3 0.2 1.3 1 0 0 1 1 1 0 PIGA (GPI anchor biosynthesis) Trp_oprn_chp PF09534.10 ORF17035 - 0.027 14.3 1.2 0.031 14.1 1.2 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) PEP-CTERM PF07589.11 ORF16765 - 0.093 12.8 0.9 0.093 12.8 0.9 2.1 2 0 0 2 2 2 0 PEP-CTERM motif DUF2114 PF09887.9 ORF16718 - 0.018 13.6 0.2 0.018 13.5 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2114) Mem_trans PF03547.18 ORF16718 - 0.24 9.7 3.3 0.29 9.5 3.3 1.0 1 0 0 1 1 1 0 Membrane transport protein Ribonuc_P_40 PF08584.11 ORF16570 - 0.026 13.8 1.4 0.033 13.5 1.4 1.1 1 0 0 1 1 1 0 Ribonuclease P 40kDa (Rpp40) subunit DUF3459 PF11941.8 ORF16012 - 0.093 13.1 0.0 0.15 12.4 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3459) DUF2471 PF10616.9 ORF15920 - 0.085 13.4 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2471) HDA2-3 PF11496.8 ORF15698 - 0.018 14.2 2.3 0.022 13.9 2.3 1.0 1 0 0 1 1 1 0 Class II histone deacetylase complex subunits 2 and 3 Glyco_tranf_2_3 PF13641.6 ORF15698 - 0.1 12.5 0.0 0.11 12.4 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase like family 2 CEP19 PF14933.6 ORF151219 - 0.034 14.5 0.6 0.044 14.1 0.6 1.1 1 0 0 1 1 1 0 CEP19-like protein CEP209_CC5 PF16574.5 ORF150338 - 0.026 14.7 1.3 0.056 13.6 1.3 1.5 1 1 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 CEP63 PF17045.5 ORF150338 - 0.089 12.7 1.7 0.099 12.5 1.7 1.1 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa ComGF PF15980.5 ORF150338 - 0.18 12.1 4.5 0.09 13.1 0.7 2.0 1 1 1 2 2 2 0 Putative Competence protein ComGF JHY PF15261.6 ORF150251 - 1.8e-10 41.6 0.2 2e-10 41.5 0.2 1.1 1 0 0 1 1 1 1 Jhy protein EGF_MSP1_1 PF12946.7 ORF147920 - 0.054 13.6 0.3 0.11 12.5 0.3 1.5 1 0 0 1 1 1 0 MSP1 EGF domain 1 zf-NOSIP PF15906.5 ORF147649 - 0.00068 19.7 0.0 0.0011 19.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein U-box PF04564.15 ORF147649 - 0.00088 19.4 0.0 0.0015 18.7 0.0 1.4 1 0 0 1 1 1 1 U-box domain Sad1_UNC PF07738.13 ORF147649 - 0.053 13.5 0.0 0.086 12.9 0.0 1.3 1 0 0 1 1 1 0 Sad1 / UNC-like C-terminal FMN_red PF03358.15 ORF147413 - 0.0018 18.0 0.1 0.0026 17.5 0.1 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Keratin_B2_2 PF13885.6 ORF147359 - 0.095 12.7 6.2 0.24 11.4 6.2 1.7 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein DUF134 PF02001.16 ORF146068 - 0.072 13.7 0.3 0.11 13.1 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF134 zf_CopZ PF18423.1 ORF146068 - 0.1 12.5 0.3 0.17 11.9 0.3 1.3 1 0 0 1 1 1 0 Zinc binding domain Tctex-1 PF03645.13 ORF145997 - 1.7e-22 79.6 2.2 2e-22 79.4 2.2 1.1 1 0 0 1 1 1 1 Tctex-1 family DUF350 PF03994.14 ORF144450 - 0.12 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF350) GILT PF03227.16 ORF144011 - 0.044 14.0 0.1 0.052 13.8 0.1 1.2 1 0 0 1 1 1 0 Gamma interferon inducible lysosomal thiol reductase (GILT) DUF2733 PF10813.8 ORF142648 - 0.068 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) ECSCR PF15820.5 ORF141483 - 0.094 12.6 0.2 0.12 12.2 0.2 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator HeLo PF14479.6 ORF141044 - 0.068 13.0 0.2 0.07 13.0 0.2 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation ER PF01133.17 ORF140492 - 2.2e-25 88.5 0.0 2.6e-25 88.3 0.0 1.0 1 0 0 1 1 1 1 Enhancer of rudimentary DUF4120 PF13496.6 ORF140382 - 0.019 15.3 0.2 2.9 8.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) Atg8 PF02991.16 ORF139279 - 1.8e-28 98.7 0.1 2e-28 98.6 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF139279 - 3.2e-07 30.7 0.0 3.8e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 DUF4120 PF13496.6 ORF138942 - 0.019 15.3 0.2 2.9 8.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) LBR_tudor PF09465.10 ORF138182 - 0.0059 16.4 0.1 0.0096 15.7 0.1 1.3 1 0 0 1 1 1 1 Lamin-B receptor of TUDOR domain DUF1325 PF07039.11 ORF138182 - 0.052 13.6 0.0 0.065 13.3 0.0 1.2 1 0 0 1 1 1 0 SGF29 tudor-like domain DUF4120 PF13496.6 ORF137417 - 0.019 15.3 0.2 2.9 8.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) SPATA3 PF15662.5 ORF135968 - 0.03 15.0 0.5 0.03 15.0 0.5 2.0 2 1 0 2 2 2 0 Spermatogenesis-associated protein 3 family SLATT_1 PF18181.1 ORF135619 - 0.0073 16.2 0.2 0.01 15.8 0.2 1.2 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain 1 SNARE PF05739.19 ORF135253 - 2.3e-05 24.3 1.3 4.3e-05 23.4 1.3 1.5 1 0 0 1 1 1 1 SNARE domain Peptidase_C37 PF05416.12 ORF135253 - 1 7.8 2.8 1.2 7.6 2.8 1.0 1 0 0 1 1 1 0 Southampton virus-type processing peptidase Rx_N PF18052.1 ORF135249 - 0.03 14.6 0.3 0.036 14.3 0.3 1.3 1 0 0 1 1 1 0 Rx N-terminal domain RP-C_C PF11800.8 ORF135249 - 0.21 11.7 2.3 0.24 11.5 2.3 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region Csm1_B PF18211.1 ORF132968 - 0.14 12.0 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Csm1 subunit domain B Tctex-1 PF03645.13 ORF132727 - 1.7e-22 79.6 2.2 2e-22 79.4 2.2 1.1 1 0 0 1 1 1 1 Tctex-1 family MORN PF02493.20 ORF132497 - 1.9e-11 43.2 17.5 3.2e-06 26.7 1.3 4.3 4 0 0 4 4 4 3 MORN repeat bVLRF1 PF18826.1 ORF131423 - 0.11 12.3 0.3 6.2 6.7 0.1 2.0 1 1 1 2 2 2 0 bacteroidetes VLRF1 release factor Basic PF01586.16 ORF13117 - 0.045 14.9 0.7 0.071 14.3 0.4 1.6 1 1 1 2 2 2 0 Myogenic Basic domain PapC_N PF13954.6 ORF130920 - 5.1e-21 75.2 0.0 6.2e-21 74.9 0.0 1.1 1 0 0 1 1 1 1 PapC N-terminal domain Herpes_UL87 PF03043.14 ORF130881 - 0.14 10.6 0.0 0.19 10.2 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL87 family Orthopox_B11R PF07033.11 ORF129291 - 0.054 13.3 1.0 0.08 12.7 1.0 1.3 1 0 0 1 1 1 0 Orthopoxvirus B11R protein S4 PF01479.25 ORF128852 - 1.1e-12 47.4 0.1 1.8e-12 46.7 0.1 1.3 1 0 0 1 1 1 1 S4 domain zn-ribbon_14 PF16503.5 ORF128743 - 0.0056 16.1 1.7 0.0099 15.4 1.7 1.4 1 0 0 1 1 1 1 Zinc-ribbon CBP4 PF07960.11 ORF128633 - 0.033 14.0 0.2 0.041 13.7 0.2 1.2 1 0 0 1 1 1 0 CBP4 LEDGF PF11467.8 ORF128610 - 0.012 15.3 1.0 0.12 11.9 1.0 2.0 1 1 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) DUF676 PF05057.14 ORF128564 - 1.3e-27 96.7 0.1 1.4e-27 96.6 0.1 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF128564 - 3.6e-06 27.0 0.0 3.8e-06 26.9 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase PGAP1 PF07819.13 ORF128564 - 4e-05 23.5 0.0 4.7e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 PGAP1-like protein LCAT PF02450.15 ORF128564 - 0.00033 20.0 0.1 0.00067 18.9 0.1 1.5 1 1 1 2 2 2 1 Lecithin:cholesterol acyltransferase Hydrolase_4 PF12146.8 ORF128564 - 0.0051 16.1 0.0 0.0056 16.0 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF900 PF05990.12 ORF128564 - 0.041 13.4 0.0 0.046 13.2 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) CRF-BP PF05428.11 ORF128254 - 0.077 11.8 0.0 0.099 11.4 0.0 1.1 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) FAM176 PF14851.6 ORF127087 - 0.021 14.5 2.6 0.027 14.2 2.6 1.2 1 0 0 1 1 1 0 FAM176 family NIBRIN_BRCT_II PF16508.5 ORF127087 - 0.021 15.1 1.7 0.038 14.3 1.3 1.5 1 1 1 2 2 2 0 Second BRCT domain on Nijmegen syndrome breakage protein LEDGF PF11467.8 ORF126931 - 0.012 15.3 1.0 0.12 11.9 1.0 2.0 1 1 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) Peptidase_C58 PF03543.14 ORF126216 - 0.0025 17.6 0.0 0.003 17.3 0.0 1.1 1 0 0 1 1 1 1 Yersinia/Haemophilus virulence surface antigen CD34_antigen PF06365.12 ORF126068 - 0.44 10.1 1.6 0.76 9.3 1.6 1.3 1 0 0 1 1 1 0 CD34/Podocalyxin family Tctex-1 PF03645.13 ORF12327 - 1.7e-22 79.6 2.2 2e-22 79.4 2.2 1.1 1 0 0 1 1 1 1 Tctex-1 family DSL PF01414.19 ORF120741 - 0.00052 20.2 0.8 0.24 11.7 0.1 2.2 2 0 0 2 2 2 2 Delta serrate ligand SRR PF07709.11 ORF120164 - 0.082 13.3 0.0 8.3 7.3 0.0 2.9 2 0 0 2 2 2 0 Seven Residue Repeat KAR PF15222.6 ORF119394 - 0.0014 18.9 5.0 0.055 13.8 1.6 2.1 1 1 1 2 2 2 2 Kidney androgen-regulated LNP1 PF15419.6 ORF119394 - 0.0087 16.3 0.5 0.0088 16.3 0.5 1.1 1 0 0 1 1 1 1 Leukemia NUP98 fusion partner 1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks228.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks228.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks228.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks228.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- VEGF_C PF14554.6 ORF118285 - 0.012 15.6 8.7 0.012 15.6 8.7 2.0 2 0 0 2 2 2 0 VEGF heparin-binding domain Preseq_ALAS PF09029.10 ORF117851 - 0.26 11.8 2.3 16 6.0 0.1 2.4 1 1 2 3 3 3 0 5-aminolevulinate synthase presequence CAV_VP3 PF04771.12 ORF117428 - 0.13 12.5 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Chicken anaemia virus VP-3 protein Herpes_UL6 PF01763.16 ORF114277 - 0.014 14.0 1.3 0.015 13.8 1.3 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like CNOT1_CAF1_bind PF16415.5 ORF114277 - 0.02 14.3 0.8 0.025 14.0 0.8 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 CAF1-binding domain RSRP PF17069.5 ORF114277 - 0.2 11.2 1.1 0.22 11.0 1.1 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 SieB PF14163.6 ORF113247 - 0.0087 15.6 0.6 0.013 15.0 0.5 1.4 1 1 0 1 1 1 1 Super-infection exclusion protein B DUF2178 PF09946.9 ORF113247 - 0.013 15.6 0.1 0.022 14.9 0.1 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2178) LRR_6 PF13516.6 ORF111746 - 0.0011 18.8 0.0 1.1 9.5 0.0 2.6 2 0 0 2 2 2 2 Leucine Rich repeat Tctex-1 PF03645.13 ORF110890 - 1.7e-22 79.6 2.2 2e-22 79.4 2.2 1.1 1 0 0 1 1 1 1 Tctex-1 family Transferase PF02458.15 ORF11015 - 0.073 11.7 0.2 0.084 11.5 0.2 1.1 1 0 0 1 1 1 0 Transferase family zf-4CXXC_R1 PF10497.9 ORF108729 - 0.072 13.3 3.8 0.097 12.9 3.8 1.3 1 1 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 DUF1859 PF08948.10 ORF108452 - 0.0017 18.3 0.1 0.0022 17.9 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1859) Hydrolase_4 PF12146.8 ORF108452 - 0.0039 16.5 0.0 0.0058 15.9 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF108452 - 0.059 13.5 0.0 0.064 13.4 0.0 1.1 1 0 0 1 1 1 0 TAP-like protein LIP PF03583.14 ORF108452 - 0.061 12.6 0.0 0.072 12.4 0.0 1.1 1 0 0 1 1 1 0 Secretory lipase DUF4120 PF13496.6 ORF106862 - 0.019 15.3 0.2 2.9 8.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) Ac76 PF05814.11 ORF106315 - 0.031 14.3 0.5 0.042 13.9 0.5 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) DUF4120 PF13496.6 ORF104807 - 0.019 15.3 0.2 2.9 8.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4120) Scaffolding_pro PF11418.8 ORF104725 - 0.11 13.0 0.0 0.18 12.4 0.0 1.2 1 0 0 1 1 1 0 Phi29 scaffolding protein Tryp_alpha_amyl PF00234.22 ORF10436 - 0.01 16.3 0.5 0.01 16.3 0.5 2.2 2 0 0 2 2 2 0 Protease inhibitor/seed storage/LTP family Tctex-1 PF03645.13 ORF104222 - 1.7e-22 79.6 2.2 2e-22 79.4 2.2 1.1 1 0 0 1 1 1 1 Tctex-1 family PLL PF18587.1 ORF104041 - 0.085 13.0 0.7 0.13 12.4 0.7 1.3 1 0 0 1 1 1 0 PTX/LNS-Like (PLL) domain EGF PF00008.27 ORF103587 - 0.049 13.9 0.5 0.088 13.1 0.5 1.4 1 0 0 1 1 1 0 EGF-like domain DUF4785 PF16024.5 ORF102734 - 0.098 11.4 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4785) TetR_C_12 PF16914.5 ORF100397 - 0.17 12.0 2.3 0.22 11.6 0.2 1.9 1 1 1 2 2 2 0 Bacterial transcriptional repressor C-terminal P2_N PF18628.1 ORF100228 - 0.037 13.8 0.8 0.051 13.3 0.5 1.3 1 1 0 1 1 1 0 Viral coat protein P2 N-terminal domain LMBR1 PF04791.16 ORF100228 - 0.13 11.2 1.4 0.13 11.1 1.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein UBA_3 PF09288.10 ORF100228 - 1 9.2 4.4 0.36 10.7 1.1 1.9 2 0 0 2 2 2 0 Fungal ubiquitin-associated domain DUF475 PF04332.15 NODE_52263_length_343_cov_2.051948_g44343_i0reverse_frame_1 - 0.21 11.3 0.0 0.25 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF475) Peptidase_S76 PF13611.6 NODE_52253_length_343_cov_2.724026_g44333_i0forward_frame_1 - 0.08 13.3 0.1 0.099 13.0 0.1 1.1 1 0 0 1 1 1 0 Serine peptidase of plant viral polyprotein, P1 YqfQ PF14181.6 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 0.43 10.8 14.7 0.62 10.2 14.7 1.2 1 0 0 1 1 1 0 YqfQ-like protein SelP_N PF04592.14 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 4.6 6.6 8.4 5.3 6.4 8.4 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Zip PF02535.22 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 4.8 6.3 6.8 5 6.3 6.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter U79_P34 PF03064.16 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 5.3 6.3 11.6 6.2 6.1 11.6 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Presenilin PF01080.17 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 6.3 5.4 13.3 7.2 5.3 13.3 1.0 1 0 0 1 1 1 0 Presenilin Raftlin PF15250.6 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 7.6 5.2 9.6 7.9 5.1 9.6 1.0 1 0 0 1 1 1 0 Raftlin SLC12 PF03522.15 NODE_52249_length_343_cov_2.840909_g44329_i0reverse_frame_1 - 7.8 5.4 8.0 8.5 5.3 8.0 1.0 1 0 0 1 1 1 0 Solute carrier family 12 MFS_1 PF07690.16 NODE_52247_length_343_cov_2.905844_g44327_i0forward_frame_1 - 9.3e-05 21.5 8.4 0.00011 21.3 8.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily zf-CCCH PF00642.24 NODE_52243_length_343_cov_4.068182_g44323_i0reverse_frame_1 - 0.0037 17.2 5.4 0.0068 16.3 5.4 1.5 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Torus PF16131.5 NODE_52243_length_343_cov_4.068182_g44323_i0reverse_frame_1 - 0.025 15.2 1.3 0.037 14.7 1.3 1.3 1 0 0 1 1 1 0 Torus domain DUF3311 PF11755.8 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 0.011 15.6 3.6 0.011 15.6 2.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3311) TadF PF16964.5 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 0.11 12.2 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Putative tight adherence pilin protein F HEAT_UF PF18817.1 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 0.13 12.6 1.3 7.8 6.9 0.5 2.7 2 1 0 2 2 2 0 Repeat of uncharacterized protein PH0542 EphA2_TM PF14575.6 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 0.77 10.7 8.0 0.93 10.4 8.0 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF2771 PF10969.8 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 1.8 8.6 7.0 4 7.5 6.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2771) Rax2 PF12768.7 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 1.9 7.9 5.1 2.6 7.5 5.1 1.2 1 0 0 1 1 1 0 Cortical protein marker for cell polarity DUF4448 PF14610.6 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 7.1 6.4 8.4 11 5.8 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) TMEM154 PF15102.6 NODE_52240_length_343_cov_23.165584_g44320_i0forward_frame_1 - 9.1 6.2 6.7 13 5.6 6.7 1.3 1 0 0 1 1 1 0 TMEM154 protein family V_ATPase_I PF01496.19 NODE_52239_length_343_cov_28.295455_g44319_i0reverse_frame_1 - 3.4e-05 22.0 0.0 4.1e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Leu_leader PF08054.11 NODE_52238_length_343_cov_40.253247_g44318_i0forward_frame_1 - 0.23 11.0 0.1 0.23 11.0 0.1 2.2 2 0 0 2 2 2 0 Leucine operon leader peptide DUF1431 PF07248.12 NODE_52201_length_343_cov_245.529221_g44282_i0reverse_frame_1 - 1.2 9.4 24.1 1.4 9.1 24.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1431) HpaP PF09483.10 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_1 - 0.062 13.5 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 Type III secretion protein (HpaP) Peptidase_S49_N PF08496.10 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_1 - 6.2 6.9 14.1 7.2 6.6 14.1 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF630 PF04783.12 NODE_52197_length_343_cov_340.824675_g44278_i0forward_frame_1 - 0.026 14.7 0.0 0.049 13.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF630) Myc_target_1 PF15179.6 NODE_52195_length_343_cov_456.876623_g44276_i0forward_frame_1 - 0.048 13.6 0.3 0.058 13.3 0.3 1.1 1 0 0 1 1 1 0 Myc target protein 1 PEMT PF04191.13 NODE_52193_length_343_cov_478.464286_g44274_i0reverse_frame_1 - 0.16 12.4 2.3 0.28 11.6 2.0 1.6 1 1 1 2 2 2 0 Phospholipid methyltransferase FapA PF03961.13 NODE_52187_length_344_cov_1.216828_g44268_i0forward_frame_1 - 0.0052 15.4 2.0 0.0056 15.3 2.0 1.0 1 0 0 1 1 1 1 Flagellar Assembly Protein A Peptidase_C32 PF05411.12 NODE_52186_length_344_cov_1.420712_g44267_i0reverse_frame_1 - 0.17 11.8 1.9 1 9.3 0.2 2.0 1 1 1 2 2 2 0 Equine arteritis virus putative proteinase HCV_NS5a_1a PF08300.13 NODE_52185_length_344_cov_1.663430_g44266_i0forward_frame_1 - 0.063 13.4 1.1 0.063 13.4 1.1 1.7 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a zinc finger domain MDM10 PF12519.8 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 0.0087 15.0 1.4 0.01 14.8 1.4 1.0 1 0 0 1 1 1 1 Mitochondrial distribution and morphology protein 10 FAM163 PF15069.6 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 0.041 14.3 1.5 0.052 14.0 1.5 1.2 1 0 0 1 1 1 0 FAM163 family FAM76 PF16046.5 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 0.095 12.0 12.2 0.11 11.8 12.2 1.1 1 0 0 1 1 1 0 FAM76 protein CTU2 PF10288.9 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 0.11 12.7 2.8 0.14 12.4 2.7 1.3 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Ctr PF04145.15 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 0.19 12.3 1.3 0.23 12.1 1.3 1.1 1 0 0 1 1 1 0 Ctr copper transporter family Zip PF02535.22 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 0.2 10.8 15.8 0.24 10.6 15.8 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Otopetrin PF03189.13 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 2.1 7.1 7.1 2.2 7.0 7.1 1.0 1 0 0 1 1 1 0 Otopetrin PAT1 PF09770.9 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 5.3 5.2 10.7 6.1 5.0 10.7 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Neur_chan_memb PF02932.16 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_1 - 8.1 6.4 6.6 9.4 6.2 6.6 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3950 PF13132.6 NODE_52170_length_344_cov_2.255663_g44251_i0reverse_frame_1 - 0.068 12.9 0.9 0.3 10.9 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3950) zf-RING_5 PF14634.6 NODE_52170_length_344_cov_2.255663_g44251_i0forward_frame_1 - 0.0095 15.9 0.4 0.019 15.0 0.4 1.5 1 0 0 1 1 1 1 zinc-RING finger domain Fer2_3 PF13085.6 NODE_52170_length_344_cov_2.255663_g44251_i0forward_frame_1 - 0.11 12.6 0.1 0.2 11.7 0.1 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain PCNA_C PF02747.15 NODE_52155_length_344_cov_39.304207_g44236_i0reverse_frame_1 - 1.3e-18 67.4 0.0 1.9e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain Pkinase_Tyr PF07714.17 NODE_52141_length_344_cov_63.957929_g44222_i0forward_frame_1 - 0.04 13.2 0.3 0.053 12.8 0.3 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase RasGAP_C PF03836.15 NODE_52139_length_344_cov_66.148867_g44220_i0forward_frame_1 - 1.4 9.0 6.0 0.13 12.4 1.4 1.6 2 0 0 2 2 2 0 RasGAP C-terminus Pro_CA PF00484.19 NODE_52138_length_344_cov_68.504854_g44219_i0reverse_frame_1 - 0.0032 17.8 0.0 0.0046 17.3 0.0 1.2 1 0 0 1 1 1 1 Carbonic anhydrase Vhr1 PF04001.13 NODE_52134_length_344_cov_73.087379_g44215_i0reverse_frame_1 - 0.042 14.2 0.8 0.16 12.2 0.1 1.9 1 1 1 2 2 2 0 Transcription factor Vhr1 zf-ribbon_3 PF13248.6 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_1 - 0.1 12.0 1.2 0.15 11.5 1.2 1.3 1 0 0 1 1 1 0 zinc-ribbon domain HalOD2 PF18547.1 NODE_52117_length_344_cov_137.682848_g44198_i0reverse_frame_1 - 0.036 14.0 0.3 0.59 10.1 0.0 2.2 2 0 0 2 2 2 0 Halobacterial output domain 2 Colicin-DNase PF12639.7 NODE_52116_length_344_cov_156.495146_g44197_i0reverse_frame_1 - 0.012 16.4 0.6 0.016 16.0 0.6 1.3 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin DUF3437 PF11919.8 NODE_52116_length_344_cov_156.495146_g44197_i0reverse_frame_1 - 0.4 10.6 3.5 0.27 11.2 1.8 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3437) BRI3BP PF14965.6 NODE_52116_length_344_cov_156.495146_g44197_i0forward_frame_1 - 0.098 12.2 2.2 0.12 11.9 2.2 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 DUF2614 PF11023.8 NODE_52116_length_344_cov_156.495146_g44197_i0forward_frame_1 - 0.15 12.1 2.2 0.28 11.3 2.2 1.4 1 0 0 1 1 1 0 Zinc-ribbon containing domain zinc_ribbon_15 PF17032.5 NODE_52114_length_344_cov_163.265372_g44195_i0forward_frame_1 - 0.22 12.3 3.3 0.26 12.1 3.3 1.4 1 1 0 1 1 1 0 zinc-ribbon family Cyclin PF08613.11 NODE_52113_length_344_cov_192.012945_g44194_i0reverse_frame_1 - 0.072 13.4 0.3 0.14 12.5 0.2 1.5 1 1 0 1 1 1 0 Cyclin Chordopox_L2 PF05803.12 NODE_52108_length_344_cov_398.728155_g44190_i0forward_frame_1 - 0.065 13.1 2.6 0.97 9.3 0.1 2.6 2 1 0 2 2 2 0 Chordopoxvirus L2 protein DUF4850 PF16142.5 NODE_52103_length_344_cov_3374.838188_g44185_i0forward_frame_1 - 0.17 11.3 0.0 0.22 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4850) DUF1664 PF07889.12 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.058 13.4 3.2 0.18 11.8 3.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Acetyltransf_11 PF13720.6 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.11 12.9 3.2 0.14 12.6 0.6 2.0 1 1 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ApoO PF09769.9 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.17 11.8 3.0 0.17 11.8 0.8 1.8 1 1 1 2 2 2 0 Apolipoprotein O Prominin PF05478.11 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.22 9.5 7.5 0.24 9.3 7.5 1.0 1 0 0 1 1 1 0 Prominin Fzo_mitofusin PF04799.13 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.32 10.5 7.6 0.46 10.0 3.9 2.0 1 1 1 2 2 2 0 fzo-like conserved region ADIP PF11559.8 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.49 10.5 14.8 0.32 11.1 9.4 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding FapA PF03961.13 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.5 8.9 10.9 0.55 8.8 10.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A FOXP-CC PF16159.5 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.54 10.9 5.8 13 6.5 0.2 2.8 1 1 1 2 2 2 0 FOXP coiled-coil domain DUF4407 PF14362.6 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.57 9.5 6.7 0.6 9.4 6.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Exonuc_VII_L PF02601.15 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 0.67 9.5 8.2 0.81 9.2 8.2 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit APG6_N PF17675.1 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 1.1 9.8 14.1 0.76 10.3 7.9 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region DivIC PF04977.15 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 1.6 8.5 12.7 2.5 7.9 4.3 2.3 1 1 1 2 2 2 0 Septum formation initiator YabA PF06156.13 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 2.6 8.7 12.9 1.3 9.7 6.9 2.1 1 1 1 2 2 2 0 Initiation control protein YabA GrpE PF01025.19 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 2.7 7.6 16.2 0.055 13.1 4.2 2.2 1 1 1 2 2 2 0 GrpE ZapB PF06005.12 NODE_52100_length_345_cov_1.290323_g44182_i0reverse_frame_1 - 6.3 7.3 15.4 3.5 8.1 10.5 2.2 1 1 1 2 2 2 0 Cell division protein ZapB LepB_GAP_N PF18172.1 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_1 - 0.0073 16.2 2.3 0.0084 16.0 2.3 1.2 1 0 0 1 1 1 1 LepB GAP domain N-terminal subdomain Flavodoxin_1 PF00258.25 NODE_52079_length_345_cov_2.367742_g44161_i0forward_frame_1 - 1.2e-05 25.5 0.0 0.00011 22.4 0.0 2.0 1 1 1 2 2 2 1 Flavodoxin FMN_red PF03358.15 NODE_52079_length_345_cov_2.367742_g44161_i0forward_frame_1 - 0.0012 18.6 0.0 0.0014 18.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_5 PF12724.7 NODE_52079_length_345_cov_2.367742_g44161_i0forward_frame_1 - 0.0028 17.9 0.0 0.54 10.5 0.0 2.2 1 1 1 2 2 2 2 Flavodoxin domain TPR_1 PF00515.28 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_1 - 0.0037 17.0 0.1 0.0092 15.8 0.1 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_1 - 0.022 14.8 0.4 0.12 12.5 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_1 - 0.04 14.0 0.1 0.067 13.3 0.1 1.4 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat Slp PF03843.13 NODE_52076_length_345_cov_2.500000_g44158_i0reverse_frame_1 - 1.1e-33 115.8 0.0 1.3e-33 115.6 0.0 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein Slp family fn2 PF00040.19 NODE_52075_length_345_cov_2.587097_g44157_i0reverse_frame_1 - 0.014 15.6 1.2 0.023 15.0 1.2 1.3 1 0 0 1 1 1 0 Fibronectin type II domain CTV_P6 PF06706.11 NODE_52075_length_345_cov_2.587097_g44157_i0reverse_frame_1 - 0.049 13.3 0.6 0.076 12.7 0.3 1.5 1 1 0 1 1 1 0 Citrus tristeza virus 6-kDa protein Exo_endo_phos_2 PF14529.6 NODE_52070_length_345_cov_2.812903_g44152_i0reverse_frame_1 - 0.056 13.3 0.0 0.078 12.8 0.0 1.3 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase FAM194 PF14977.6 NODE_52069_length_345_cov_2.851613_g44151_i0reverse_frame_1 - 0.16 11.3 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 FAM194 protein Kelch_4 PF13418.6 NODE_52068_length_345_cov_2.925806_g44150_i0reverse_frame_1 - 0.012 15.6 0.1 0.023 14.7 0.1 1.4 1 1 0 1 1 1 0 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_52068_length_345_cov_2.925806_g44150_i0reverse_frame_1 - 0.19 11.8 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 Kelch motif ATP_synt_H PF05493.13 NODE_52068_length_345_cov_2.925806_g44150_i0forward_frame_1 - 1.2 9.6 8.0 3.2 8.3 8.0 1.7 1 1 0 1 1 1 0 ATP synthase subunit H Kelch_4 PF13418.6 NODE_52067_length_345_cov_2.948387_g44149_i0forward_frame_1 - 6.1e-05 23.0 0.4 0.032 14.2 0.0 2.3 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_52067_length_345_cov_2.948387_g44149_i0forward_frame_1 - 0.00013 22.2 0.0 0.0099 16.1 0.0 2.3 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_52067_length_345_cov_2.948387_g44149_i0forward_frame_1 - 0.008 16.1 0.3 0.047 13.7 0.3 2.2 1 1 0 1 1 1 1 Kelch motif SWIM PF04434.17 NODE_52065_length_345_cov_3.132258_g44147_i0reverse_frame_1 - 5.5 6.7 10.2 5.4 6.8 7.6 2.0 2 0 0 2 2 2 0 SWIM zinc finger MitoNEET_N PF10660.9 NODE_52050_length_345_cov_52.638710_g44132_i0forward_frame_1 - 0.014 15.4 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 Iron-containing outer mitochondrial membrane protein N-terminus DUF1180 PF06679.12 NODE_52050_length_345_cov_52.638710_g44132_i0forward_frame_1 - 0.022 15.2 0.6 0.029 14.8 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) ATP-synt_8 PF00895.20 NODE_52045_length_345_cov_66.996774_g44127_i0forward_frame_1 - 2.7 8.5 6.7 6 7.4 6.7 1.7 1 0 0 1 1 1 0 ATP synthase protein 8 PGC7_Stella PF15549.6 NODE_52040_length_345_cov_73.970968_g44122_i0reverse_frame_1 - 0.21 11.6 4.8 0.24 11.4 4.8 1.1 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain Clathrin_bdg PF15045.6 NODE_52040_length_345_cov_73.970968_g44122_i0forward_frame_1 - 0.12 12.4 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 Clathrin-binding box of Aftiphilin, vesicle trafficking Opi1 PF08618.10 NODE_52032_length_345_cov_91.364516_g44114_i0forward_frame_1 - 0.071 12.4 2.7 0.088 12.0 2.7 1.1 1 0 0 1 1 1 0 Transcription factor Opi1 Fer4_23 PF18009.1 NODE_52031_length_345_cov_100.941935_g44113_i0reverse_frame_1 - 0.044 14.2 0.1 0.062 13.7 0.1 1.3 1 0 0 1 1 1 0 4Fe-4S iron-sulfur cluster binding domain X PF00739.19 NODE_52028_length_345_cov_110.525806_g44110_i0forward_frame_1 - 0.1 12.7 0.7 0.13 12.4 0.7 1.3 1 1 0 1 1 1 0 Trans-activation protein X PetL PF05115.14 NODE_52027_length_345_cov_111.441935_g44109_i0reverse_frame_1 - 1.9 8.5 8.4 3 7.9 8.4 1.3 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) Ribosomal_S14 PF00253.21 NODE_52015_length_345_cov_3852.041935_g44098_i0reverse_frame_1 - 3.1e-11 42.8 4.6 4.9e-11 42.2 1.4 2.1 1 1 1 2 2 2 1 Ribosomal protein S14p/S29e DEAD_2 PF06733.15 NODE_52012_length_346_cov_0.932476_g44095_i0reverse_frame_3 - 1.4e-15 57.4 2.7 5.6e-15 55.4 1.1 2.0 2 0 0 2 2 2 1 DEAD_2 Band_7_1 PF13421.6 NODE_52012_length_346_cov_0.932476_g44095_i0reverse_frame_3 - 0.0099 15.6 0.0 0.012 15.3 0.0 1.1 1 0 0 1 1 1 1 SPFH domain-Band 7 family MMPL PF03176.15 NODE_52011_length_346_cov_1.205788_g44094_i0reverse_frame_2 - 1.1 8.1 3.1 1.3 7.8 3.1 1.1 1 0 0 1 1 1 0 MMPL family Fanconi_A PF03511.14 NODE_52009_length_346_cov_1.533762_g44092_i0reverse_frame_2 - 0.052 13.5 0.8 0.33 10.9 0.2 2.1 1 1 1 2 2 2 0 Fanconi anaemia group A protein LepA_C PF06421.12 NODE_52008_length_346_cov_1.627010_g44091_i0forward_frame_3 - 0.021 15.0 0.6 0.03 14.5 0.6 1.3 1 0 0 1 1 1 0 GTP-binding protein LepA C-terminus Anti-adapt_IraP PF10796.9 NODE_52008_length_346_cov_1.627010_g44091_i0forward_frame_2 - 0.00041 20.9 0.1 0.00058 20.4 0.1 1.3 1 0 0 1 1 1 1 Sigma-S stabilisation anti-adaptor protein OEP PF02321.18 NODE_52006_length_346_cov_1.803859_g44089_i0forward_frame_2 - 0.006 16.4 0.2 0.0068 16.2 0.2 1.1 1 0 0 1 1 1 1 Outer membrane efflux protein TrbI_Ftype PF09677.10 NODE_52006_length_346_cov_1.803859_g44089_i0forward_frame_2 - 0.084 13.2 0.2 0.12 12.7 0.2 1.3 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) YqhG PF11079.8 NODE_52003_length_346_cov_1.890675_g44086_i0reverse_frame_2 - 0.046 12.7 0.4 0.048 12.6 0.4 1.1 1 0 0 1 1 1 0 Bacterial protein YqhG of unknown function DUF3342 PF11822.8 NODE_52002_length_346_cov_1.971061_g44085_i0reverse_frame_3 - 3.5e-08 33.5 0.6 4.8e-08 33.1 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) SHIPPO-rpt PF07004.12 NODE_51990_length_346_cov_2.524116_g44073_i0forward_frame_2 - 0.0058 17.5 7.8 0.0085 17.0 0.3 2.8 2 1 0 2 2 2 1 Sperm-tail PG-rich repeat PhoU PF01895.19 NODE_51986_length_346_cov_2.913183_g44069_i0reverse_frame_3 - 0.05 14.1 0.4 0.084 13.3 0.4 1.3 1 0 0 1 1 1 0 PhoU domain Ycf70 PF17382.2 NODE_51978_length_346_cov_3.848875_g44061_i0reverse_frame_2 - 8.1 6.9 8.1 2.9 8.4 5.0 1.8 1 1 1 2 2 2 0 Uncharacterized Ycf70-like CxC3 PF18804.1 NODE_51978_length_346_cov_3.848875_g44061_i0forward_frame_3 - 0.0015 18.3 1.2 0.0023 17.8 0.8 1.5 2 0 0 2 2 2 1 CxC3 like cysteine cluster associated with KDZ transposases Syntaxin-6_N PF09177.11 NODE_51978_length_346_cov_3.848875_g44061_i0forward_frame_2 - 0.0079 16.7 4.2 0.0098 16.4 4.2 1.3 1 0 0 1 1 1 1 Syntaxin 6, N-terminal CHDCT2 PF08074.11 NODE_51978_length_346_cov_3.848875_g44061_i0forward_frame_2 - 0.016 15.4 2.2 0.017 15.3 2.2 1.0 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain zf-C3HC PF07967.13 NODE_51978_length_346_cov_3.848875_g44061_i0forward_frame_2 - 0.031 14.3 4.4 0.07 13.2 4.4 1.7 1 1 0 1 1 1 0 C3HC zinc finger-like Pkinase PF00069.25 NODE_51976_length_346_cov_11.012862_g44059_i0forward_frame_2 - 0.0058 16.0 0.3 0.042 13.2 0.0 2.0 2 0 0 2 2 2 1 Protein kinase domain NAD_binding_5 PF07994.12 NODE_51976_length_346_cov_11.012862_g44059_i0forward_frame_2 - 0.15 11.4 0.1 0.18 11.1 0.1 1.1 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase PrgU PF09627.10 NODE_51973_length_346_cov_43.466238_g44056_i0reverse_frame_3 - 0.016 15.2 0.1 0.019 14.9 0.1 1.2 1 0 0 1 1 1 0 PrgU-like protein DUF2946 PF11162.8 NODE_51967_length_346_cov_63.057878_g44050_i0reverse_frame_2 - 0.0094 16.6 3.0 0.014 16.0 3.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2946) IMUP PF15761.5 NODE_51967_length_346_cov_63.057878_g44050_i0forward_frame_2 - 0.17 12.6 2.0 0.65 10.7 2.0 1.8 1 1 0 1 1 1 0 Immortalisation up-regulated protein EF-hand_1 PF00036.32 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 6e-07 28.6 0.6 1.6e-06 27.2 0.3 1.9 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 2.2e-06 28.0 1.3 3.3e-06 27.4 1.3 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 4.3e-06 26.0 2.0 5.6e-06 25.6 0.5 2.0 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 4.3e-06 26.2 0.2 1e-05 25.0 0.2 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 0.0017 18.2 1.6 0.01 15.7 0.4 2.3 1 1 1 2 2 2 1 EF-hand domain pair DUF1825 PF08855.10 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 0.011 15.7 0.5 0.015 15.2 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) PhetRS_B1 PF18262.1 NODE_51966_length_346_cov_64.463023_g44049_i0forward_frame_3 - 0.083 13.1 0.9 0.14 12.4 0.9 1.5 1 0 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain IL17 PF06083.11 NODE_51964_length_346_cov_66.372990_g44047_i0reverse_frame_3 - 0.0018 18.7 0.1 0.0026 18.2 0.1 1.3 1 0 0 1 1 1 1 Interleukin-17 PHP_C PF13263.6 NODE_51962_length_346_cov_69.064309_g44045_i0reverse_frame_3 - 0.018 14.8 0.0 0.035 13.8 0.0 1.5 1 0 0 1 1 1 0 PHP-associated Late_protein_L1 PF00500.18 NODE_51962_length_346_cov_69.064309_g44045_i0reverse_frame_3 - 0.081 11.7 0.0 0.099 11.4 0.0 1.1 1 0 0 1 1 1 0 L1 (late) protein KAAG1 PF15354.6 NODE_51962_length_346_cov_69.064309_g44045_i0reverse_frame_3 - 1.9 9.1 5.9 1.3 9.6 2.3 2.0 1 1 1 2 2 2 0 Kidney-associated antigen 1 RCC1_2 PF13540.6 NODE_51952_length_346_cov_110.942122_g44035_i0reverse_frame_3 - 0.00054 19.7 9.4 0.9 9.4 0.1 3.6 3 1 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_51952_length_346_cov_110.942122_g44035_i0reverse_frame_3 - 0.0097 16.0 0.5 19 5.3 0.0 3.0 3 0 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 Lipocalin_7 PF14651.6 NODE_51952_length_346_cov_110.942122_g44035_i0reverse_frame_3 - 0.32 10.9 1.7 3 7.8 1.0 2.1 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family PheRS_DBD2 PF18554.1 NODE_51952_length_346_cov_110.942122_g44035_i0reverse_frame_3 - 2.9 8.0 6.7 6.5 6.8 0.5 3.0 3 0 0 3 3 3 0 PheRS DNA binding domain 2 DUF3552 PF12072.8 NODE_51952_length_346_cov_110.942122_g44035_i0forward_frame_2 - 0.011 15.1 0.1 0.016 14.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) DUF4691 PF15762.5 NODE_51944_length_346_cov_284.475884_g44027_i0forward_frame_3 - 0.01 16.0 0.6 0.012 15.8 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4691) MORN PF02493.20 NODE_51939_length_346_cov_1042.009646_g44022_i0forward_frame_3 - 4.5e-19 67.1 17.2 4.1e-07 29.5 0.5 3.9 4 0 0 4 4 4 3 MORN repeat zf-C2H2_7 PF15269.6 NODE_51936_length_346_cov_1413.472669_g44020_i0forward_frame_3 - 0.0064 16.6 0.0 0.014 15.5 0.0 1.6 1 0 0 1 1 1 1 Zinc-finger FtsX PF02687.21 NODE_51931_length_346_cov_141863.623794_g44015_i0forward_frame_3 - 0.25 11.8 16.4 0.32 11.5 16.4 1.1 1 0 0 1 1 1 0 FtsX-like permease family Glyco_transf_20 PF00982.21 NODE_51931_length_346_cov_141863.623794_g44015_i0forward_frame_2 - 9.8 4.7 6.8 12 4.4 6.8 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 Sigma54_AID PF00309.20 NODE_51928_length_347_cov_1.272436_g44012_i0reverse_frame_3 - 0.039 13.8 0.5 0.078 12.8 0.5 1.5 1 0 0 1 1 1 0 Sigma-54 factor, Activator interacting domain (AID) ALG3 PF05208.13 NODE_51928_length_347_cov_1.272436_g44012_i0forward_frame_3 - 1.4e-09 37.9 3.4 1.4e-09 37.9 3.4 1.2 1 1 0 1 1 1 1 ALG3 protein Syd PF07348.12 NODE_51927_length_347_cov_1.278846_g44011_i0reverse_frame_2 - 0.034 13.8 0.7 0.042 13.5 0.7 1.1 1 0 0 1 1 1 0 Syd protein (SUKH-2) CDP-OH_P_tran_2 PF08009.11 NODE_51927_length_347_cov_1.278846_g44011_i0forward_frame_2 - 0.031 14.2 0.1 0.031 14.2 0.1 2.1 2 0 0 2 2 2 0 CDP-alcohol phosphatidyltransferase 2 Helicase_C_4 PF13871.6 NODE_51926_length_347_cov_1.352564_g44010_i0forward_frame_3 - 0.12 12.0 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 C-terminal domain on Strawberry notch homologue Tox-MPTase2 PF15638.6 NODE_51925_length_347_cov_1.387821_g44009_i0reverse_frame_3 - 0.064 13.0 0.0 0.085 12.6 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase toxin 2 EXOSC1 PF10447.9 NODE_51924_length_347_cov_1.419872_g44008_i0reverse_frame_3 - 6e-05 23.6 0.0 0.00011 22.8 0.0 1.4 1 0 0 1 1 1 1 Exosome component EXOSC1/CSL4 RMI1_C PF16099.5 NODE_51924_length_347_cov_1.419872_g44008_i0reverse_frame_3 - 0.087 12.7 0.0 0.099 12.5 0.0 1.2 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold COPI_C PF06957.11 NODE_51924_length_347_cov_1.419872_g44008_i0forward_frame_3 - 0.065 12.0 0.0 0.074 11.8 0.0 1.1 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus Peptidase_C41 PF05417.11 NODE_51923_length_347_cov_1.445513_g44007_i0forward_frame_2 - 0.51 10.2 4.8 2.1 8.1 0.2 2.1 2 0 0 2 2 2 0 Hepatitis E cysteine protease LMF1 PF06762.14 NODE_51921_length_347_cov_1.644231_g44005_i0reverse_frame_2 - 0.013 14.6 0.4 0.014 14.6 0.4 1.1 1 0 0 1 1 1 0 Lipase maturation factor NADHdh PF00146.21 NODE_51921_length_347_cov_1.644231_g44005_i0reverse_frame_2 - 0.047 13.0 1.4 0.075 12.3 1.4 1.3 1 0 0 1 1 1 0 NADH dehydrogenase Gp49 PF05973.14 NODE_51919_length_347_cov_1.794872_g44003_i0reverse_frame_2 - 0.29 11.3 1.7 16 5.7 0.1 2.2 2 0 0 2 2 2 0 Phage derived protein Gp49-like (DUF891) Adeno_E1B_55K PF01696.17 NODE_51919_length_347_cov_1.794872_g44003_i0forward_frame_2 - 0.0075 15.0 0.0 0.0093 14.7 0.0 1.1 1 0 0 1 1 1 1 Adenovirus EB1 55K protein / large t-antigen MxiM PF11441.8 NODE_51919_length_347_cov_1.794872_g44003_i0forward_frame_2 - 0.013 15.7 0.2 0.018 15.3 0.2 1.3 1 1 0 1 1 1 0 Pilot protein MxiM DUF3258 PF11646.8 NODE_51919_length_347_cov_1.794872_g44003_i0forward_frame_2 - 0.031 14.4 0.2 0.042 14.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF3258 Iso_dh PF00180.20 NODE_51918_length_347_cov_1.891026_g44002_i0reverse_frame_3 - 3.3e-22 79.1 0.0 4.2e-22 78.8 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Fibrillin_U_N PF18193.1 NODE_51917_length_347_cov_1.942308_g44001_i0forward_frame_3 - 0.057 13.5 2.8 0.15 12.2 2.8 1.7 1 0 0 1 1 1 0 Fibrillin 1 unique N-terminal domain RINGv PF12906.7 NODE_51913_length_347_cov_1.996795_g43997_i0forward_frame_2 - 0.44 10.7 8.7 2.1 8.5 3.4 2.4 2 0 0 2 2 2 0 RING-variant domain SLATT_4 PF18186.1 NODE_51912_length_347_cov_2.112179_g43996_i0forward_frame_2 - 0.45 10.1 2.9 0.23 11.1 1.0 1.4 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 4 PAGK PF15284.6 NODE_51908_length_347_cov_2.544872_g43992_i0forward_frame_3 - 0.037 13.9 0.2 0.12 12.3 0.0 1.8 1 1 1 2 2 2 0 Phage-encoded virulence factor Mannitol_dh_C PF08125.13 NODE_51907_length_347_cov_2.663462_g43991_i0reverse_frame_3 - 4.1e-05 23.2 0.0 4.9e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain DUF3236 PF11576.8 NODE_51905_length_347_cov_2.705128_g43989_i0forward_frame_3 - 0.16 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3236) FXa_inhibition PF14670.6 NODE_51904_length_347_cov_2.794872_g43988_i0forward_frame_3 - 0.58 10.5 8.5 6.7 7.1 0.1 2.6 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site FeS PF04060.13 NODE_51903_length_347_cov_2.881410_g43987_i0reverse_frame_2 - 0.019 14.6 0.1 0.019 14.6 0.1 1.6 2 0 0 2 2 2 0 Putative Fe-S cluster DUF1652 PF07865.11 NODE_51903_length_347_cov_2.881410_g43987_i0reverse_frame_2 - 0.15 11.9 0.7 0.23 11.3 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1652) DUF2256 PF10013.9 NODE_51903_length_347_cov_2.881410_g43987_i0forward_frame_2 - 0.015 15.4 4.7 0.69 10.1 0.2 3.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) AC_N PF16214.5 NODE_51900_length_347_cov_3.160256_g43984_i0reverse_frame_3 - 0.24 10.5 1.1 0.29 10.2 1.1 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region CCDC85 PF10226.9 NODE_51899_length_347_cov_3.233974_g43983_i0reverse_frame_3 - 0.02 14.6 0.0 0.021 14.5 0.0 1.1 1 0 0 1 1 1 0 CCDC85 family Tautomerase PF01361.21 NODE_51899_length_347_cov_3.233974_g43983_i0reverse_frame_3 - 0.061 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Tautomerase enzyme CENP-B_N PF04218.13 NODE_51899_length_347_cov_3.233974_g43983_i0reverse_frame_3 - 0.062 13.0 0.2 0.15 11.7 0.0 1.7 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain Acetyltransf_16 PF05301.11 NODE_51895_length_347_cov_3.891026_g43979_i0reverse_frame_3 - 1.1e-08 35.0 0.0 1.3e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Glyco_H_20C_C PF18088.1 NODE_51890_length_347_cov_32.358974_g43974_i0forward_frame_3 - 0.015 15.2 0.2 0.018 14.9 0.2 1.1 1 0 0 1 1 1 0 Glycoside Hydrolase 20C C-terminal domain Viral_cys_rich PF08008.12 NODE_51890_length_347_cov_32.358974_g43974_i0forward_frame_3 - 0.13 12.4 0.3 12 6.0 0.0 2.2 2 0 0 2 2 2 0 Viral cysteine rich Dickkopf_N PF04706.12 NODE_51888_length_347_cov_51.887821_g43972_i0forward_frame_3 - 0.38 11.3 7.4 0.15 12.6 2.1 2.3 2 1 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region HMG_box PF00505.19 NODE_51884_length_347_cov_58.631410_g43968_i0reverse_frame_2 - 1.4e-06 28.6 6.0 2.2e-06 28.0 6.0 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_51884_length_347_cov_58.631410_g43968_i0reverse_frame_2 - 1.6e-05 25.4 4.3 2.7e-05 24.7 4.3 1.4 1 0 0 1 1 1 1 HMG-box domain Zn_ribbon_17 PF17120.5 NODE_51879_length_347_cov_64.304487_g43963_i0forward_frame_2 - 0.58 9.8 5.0 0.18 11.4 2.2 1.6 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type Sporozoite_P67 PF05642.11 NODE_51877_length_347_cov_65.900641_g43961_i0reverse_frame_2 - 0.28 9.2 2.0 0.31 9.1 2.0 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen CAP PF00188.26 NODE_51876_length_347_cov_67.961538_g43960_i0reverse_frame_3 - 3.3e-09 37.7 0.1 4.3e-09 37.3 0.1 1.1 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DUF4679 PF15728.5 NODE_51875_length_347_cov_70.810897_g43959_i0reverse_frame_3 - 0.83 8.6 10.9 0.99 8.4 10.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) CCDC53 PF10152.9 NODE_51875_length_347_cov_70.810897_g43959_i0reverse_frame_3 - 3.1 8.2 8.0 3.6 8.0 8.0 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex MFMR_assoc PF16596.5 NODE_51875_length_347_cov_70.810897_g43959_i0reverse_frame_2 - 0.034 14.6 6.1 0.048 14.1 6.1 1.3 1 0 0 1 1 1 0 Disordered region downstream of MFMR FA_desaturase PF00487.24 NODE_51875_length_347_cov_70.810897_g43959_i0forward_frame_2 - 4.3 7.1 10.0 4.5 7.0 10.0 1.2 1 0 0 1 1 1 0 Fatty acid desaturase SyrA PF11089.8 NODE_51868_length_347_cov_94.875000_g43952_i0reverse_frame_2 - 0.13 12.3 0.9 0.33 11.0 0.2 1.9 2 0 0 2 2 2 0 Exopolysaccharide production repressor FGFR3_TM PF18123.1 NODE_51864_length_347_cov_106.698718_g43948_i0forward_frame_2 - 3.7 7.2 6.3 1.7 8.2 3.5 2.0 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Zn_Tnp_IS1595 PF12760.7 NODE_51861_length_347_cov_132.820513_g43945_i0reverse_frame_3 - 0.18 11.8 4.1 0.35 10.9 4.1 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Auto_anti-p27 PF06677.12 NODE_51861_length_347_cov_132.820513_g43945_i0reverse_frame_3 - 2.4 8.4 10.6 0.11 12.6 2.6 2.5 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) LRR_1 PF00560.33 NODE_51860_length_347_cov_134.317308_g43944_i0forward_frame_2 - 0.18 12.5 1.1 0.68 10.7 0.3 2.3 2 1 0 2 2 2 0 Leucine Rich Repeat IMUP PF15761.5 NODE_51859_length_347_cov_143.932692_g43943_i0reverse_frame_3 - 0.27 12.0 8.1 0.36 11.5 8.1 1.3 1 1 0 1 1 1 0 Immortalisation up-regulated protein DUF1003 PF06210.11 NODE_51858_length_347_cov_163.974359_g43942_i0reverse_frame_3 - 2.2 8.4 4.2 1.4 9.0 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1003) Spc7_N PF15402.6 NODE_51855_length_347_cov_210.714744_g43939_i0forward_frame_3 - 1.1 7.4 7.5 1.2 7.3 7.5 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 DUF5637 PF18687.1 NODE_51854_length_347_cov_229.669872_g43938_i0reverse_frame_2 - 0.066 13.2 2.2 0.066 13.2 2.2 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5637) GluR_Homer-bdg PF10606.9 NODE_51854_length_347_cov_229.669872_g43938_i0forward_frame_2 - 0.03 14.5 12.0 0.032 14.4 3.5 2.2 2 0 0 2 2 2 0 Homer-binding domain of metabotropic glutamate receptor WTF PF03303.13 NODE_51852_length_347_cov_312.618590_g43936_i0forward_frame_2 - 0.088 12.5 0.7 0.1 12.3 0.7 1.1 1 0 0 1 1 1 0 WTF protein ATP1G1_PLM_MAT8 PF02038.16 NODE_51851_length_347_cov_374.865385_g43935_i0forward_frame_2 - 0.092 12.2 1.5 0.59 9.6 0.2 2.2 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family zf-C3Hc3H PF13891.6 NODE_51849_length_347_cov_1040.073718_g43933_i0reverse_frame_2 - 0.096 13.1 9.2 3.2 8.2 7.5 2.2 1 1 1 2 2 2 0 Potential DNA-binding domain HSBP1 PF06825.12 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 4.6e-27 93.6 2.3 6.4e-27 93.2 2.3 1.2 1 0 0 1 1 1 1 Heat shock factor binding protein 1 Baculo_PEP_C PF04513.12 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 0.0012 18.9 1.8 0.0014 18.7 1.8 1.1 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus CLZ PF16526.5 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 0.012 16.0 0.1 0.023 15.1 0.1 1.5 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels BORCS6 PF10157.9 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 0.015 15.5 0.4 0.018 15.3 0.4 1.1 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 Erythro-docking PF09277.11 NODE_51849_length_347_cov_1040.073718_g43933_i0forward_frame_2 - 0.053 13.4 0.4 0.092 12.7 0.4 1.3 1 0 0 1 1 1 0 Erythronolide synthase, docking Aa_trans PF01490.18 NODE_51845_length_348_cov_0.987220_g43930_i0forward_frame_2 - 0.0039 16.0 0.2 0.0045 15.7 0.2 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Conotoxin PF02950.17 NODE_51844_length_348_cov_1.092652_g43929_i0reverse_frame_2 - 1.2 10.2 4.0 0.38 11.8 0.9 1.6 2 0 0 2 2 2 0 Conotoxin IGFBP PF00219.18 NODE_51842_length_348_cov_1.364217_g43927_i0reverse_frame_3 - 0.033 14.9 0.5 0.033 14.9 0.5 2.1 2 1 0 2 2 2 0 Insulin-like growth factor binding protein DUF5621 PF18532.1 NODE_51842_length_348_cov_1.364217_g43927_i0forward_frame_3 - 0.0014 18.5 1.0 0.0014 18.5 1.0 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF5621) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks229.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks229.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks229.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks229.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HMG_box PF00505.19 ORF24683 - 6e-34 116.3 16.3 6.6e-20 71.3 7.6 2.6 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF24683 - 3e-23 82.2 18.1 2.2e-15 57.0 7.8 2.5 2 0 0 2 2 2 2 HMG-box domain CHDNT PF08073.12 ORF24683 - 0.00065 19.6 0.3 0.0033 17.4 0.2 2.2 2 0 0 2 2 2 1 CHDNT (NUC034) domain HMG_box_5 PF14887.6 ORF24683 - 0.011 15.6 3.6 0.011 15.6 3.6 2.4 2 0 0 2 2 2 0 HMG (high mobility group) box 5 Pox_polyA_pol_N PF12630.7 ORF24683 - 0.031 14.6 0.9 0.031 14.6 0.9 2.3 2 0 0 2 2 2 0 Poxvirus poly(A) polymerase N-terminal domain Focal_AT PF03623.13 ORF24683 - 0.24 11.4 0.1 0.24 11.4 0.1 2.2 2 0 0 2 2 2 0 Focal adhesion targeting region Med11 PF10280.9 ORF24683 - 1.2 9.5 7.5 0.29 11.6 0.3 3.0 2 1 0 2 2 2 0 Mediator complex protein Trns_repr_metal PF02583.17 ORF135997 - 0.29 11.5 1.7 0.86 10.0 0.0 2.5 3 0 0 3 3 3 0 Metal-sensitive transcriptional repressor TIR PF01582.20 ORF135455 - 9.5e-05 22.3 0.0 0.00021 21.2 0.0 1.5 1 0 0 1 1 1 1 TIR domain TIR_2 PF13676.6 ORF135455 - 0.077 13.6 0.0 0.16 12.6 0.0 1.5 1 0 0 1 1 1 0 TIR domain COX8 PF02285.15 ORF135455 - 0.089 12.7 0.8 0.45 10.4 0.8 2.2 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII YrhC PF14143.6 ORF135455 - 0.28 11.3 2.1 1.1 9.3 0.0 3.0 3 0 0 3 3 3 0 YrhC-like protein DUF4381 PF14316.6 ORF135455 - 2.2 8.5 4.7 12 6.1 2.2 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4381) DNA_primase_lrg PF04104.14 ORF120701 - 2.3e-67 227.2 0.1 2.3e-67 227.2 0.1 1.6 2 0 0 2 2 2 1 Eukaryotic and archaeal DNA primase, large subunit PheRS_DBD2 PF18554.1 ORF1136 - 1 9.4 3.0 9.1 6.4 0.1 2.8 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Pkinase PF00069.25 ORF94089 - 3.3e-79 266.0 0.1 5.1e-79 265.3 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94089 - 9.3e-44 149.6 0.0 1.4e-43 149.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF94089 - 1.3e-25 89.6 16.9 2.8e-12 46.9 2.3 4.5 4 0 0 4 4 4 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF94089 - 5.1e-25 85.1 25.6 3e-07 29.5 0.3 5.7 6 0 0 6 6 6 4 EF hand EF-hand_6 PF13405.6 ORF94089 - 1.8e-23 80.4 14.9 9.6e-07 28.3 0.1 5.6 5 0 0 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 ORF94089 - 3.2e-21 73.8 24.5 4.6e-06 25.9 0.2 6.0 6 0 0 6 6 6 4 EF hand EF-hand_8 PF13833.6 ORF94089 - 2.9e-14 52.7 23.5 1.1e-05 25.1 1.9 5.0 2 1 3 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF94089 - 1.1e-07 32.2 2.6 0.0024 18.2 0.4 2.6 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF94089 - 0.00016 21.1 0.0 0.0003 20.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF94089 - 0.00047 20.1 7.1 0.37 10.8 0.4 3.6 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Kinase-like PF14531.6 ORF94089 - 0.0062 15.9 0.0 0.015 14.6 0.0 1.7 1 1 0 1 1 1 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF94089 - 0.044 13.3 1.7 7.4 6.0 0.1 2.9 3 0 0 3 3 3 0 PhoP regulatory network protein YrbL PMBR PF09373.10 ORF94089 - 0.048 13.8 0.5 17 5.8 0.0 4.4 5 0 0 5 5 5 0 Pseudomurein-binding repeat APH PF01636.23 ORF94089 - 0.051 13.5 0.0 0.19 11.6 0.0 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_10 PF14788.6 ORF94089 - 0.5 10.3 8.5 1.4 8.8 0.2 4.5 4 1 1 5 5 5 0 EF hand Oxysterol_BP PF01237.18 ORF9204 - 3.7e-40 137.9 3.3 3.2e-39 134.8 3.3 2.1 1 1 0 1 1 1 1 Oxysterol-binding protein NAD_binding_5 PF07994.12 ORF63936 - 5.7e-103 344.7 0.0 7.1e-103 344.4 0.0 1.1 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase Inos-1-P_synth PF01658.17 ORF63936 - 1.9e-38 131.1 0.1 3.9e-38 130.0 0.1 1.6 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase Peptidase_S9 PF00326.21 ORF63437 - 0.11 12.0 0.0 0.21 11.1 0.0 1.4 1 0 0 1 1 1 0 Prolyl oligopeptidase family Kelch_5 PF13854.6 ORF48199 - 2.7e-15 56.0 11.7 0.0094 15.9 0.0 5.9 6 0 0 6 6 6 5 Kelch motif Kelch_3 PF13415.6 ORF48199 - 2.8e-11 43.4 15.1 0.0015 18.7 0.0 6.4 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF48199 - 2e-10 40.1 1.9 0.022 14.3 0.0 6.5 6 0 0 6 6 6 3 Kelch motif Kelch_6 PF13964.6 ORF48199 - 3.6e-09 36.6 6.0 0.43 10.9 0.5 5.5 4 1 1 5 5 5 3 Kelch motif Kelch_2 PF07646.15 ORF48199 - 9e-09 35.0 7.1 0.099 12.7 0.4 6.4 6 0 0 6 6 6 2 Kelch motif Kelch_4 PF13418.6 ORF48199 - 2.5e-07 30.6 15.0 0.016 15.2 0.1 6.3 6 0 0 6 6 6 3 Galactose oxidase, central domain DUF4185 PF13810.6 ORF48199 - 0.00059 19.2 15.0 0.66 9.1 0.1 4.1 2 1 1 3 3 3 3 Domain of unknown function (DUF4185) Sortilin-Vps10 PF15902.5 ORF48199 - 0.0013 17.6 1.8 3 6.5 0.0 3.0 2 1 2 4 4 4 3 Sortilin, neurotensin receptor 3, BNR PF02012.20 ORF48199 - 0.36 11.0 13.1 3.2 8.1 1.0 4.4 3 0 0 3 3 3 0 BNR/Asp-box repeat Evr1_Alr PF04777.13 ORF43944 - 0.061 13.8 0.1 0.15 12.5 0.1 1.6 1 0 0 1 1 1 0 Erv1 / Alr family Evr1_Alr PF04777.13 ORF40276 - 0.061 13.8 0.1 0.15 12.5 0.1 1.6 1 0 0 1 1 1 0 Erv1 / Alr family Proton_antipo_M PF00361.20 ORF37272 - 4.6e-36 124.5 37.9 4.6e-36 124.5 37.9 2.5 3 0 0 3 3 3 1 Proton-conducting membrane transporter TPR_MLP1_2 PF07926.12 ORF26552 - 0.00062 19.8 71.4 0.27 11.3 10.0 5.7 1 1 4 5 5 5 3 TPR/MLP1/MLP2-like protein GAS PF13851.6 ORF26552 - 0.0018 17.7 80.9 0.39 10.0 12.5 4.5 1 1 3 4 4 4 3 Growth-arrest specific micro-tubule binding bZIP_1 PF00170.21 ORF26552 - 0.0074 16.4 2.2 0.0074 16.4 2.2 8.8 5 1 5 11 11 11 2 bZIP transcription factor APG6_N PF17675.1 ORF26552 - 0.027 15.0 79.6 0.2 12.2 14.7 5.6 1 1 4 5 5 5 0 Apg6 coiled-coil region Unstab_antitox PF09720.10 ORF26552 - 0.053 13.6 0.7 1.7 8.7 0.2 2.8 2 0 0 2 2 2 0 Putative addiction module component FUSC PF04632.12 ORF26552 - 0.091 11.3 6.7 0.17 10.4 1.5 2.6 2 1 1 3 3 3 0 Fusaric acid resistance protein family ERM PF00769.19 ORF26552 - 0.44 10.3 68.1 0.14 12.0 5.7 4.0 1 1 2 3 3 3 0 Ezrin/radixin/moesin family Trimer_CC PF08954.11 ORF26552 - 2 8.0 10.6 0.86 9.2 0.7 4.2 3 1 1 4 4 4 0 Trimerisation motif DUF4201 PF13870.6 ORF26552 - 5.2 6.8 81.6 7.3 6.3 10.4 5.7 1 1 4 5 5 5 0 Domain of unknown function (DUF4201) AAA_13 PF13166.6 ORF26552 - 5.5 5.5 65.3 0.26 9.9 21.6 3.0 1 1 2 3 3 3 0 AAA domain DUF948 PF06103.11 ORF26552 - 5.6 7.3 25.1 10 6.5 0.8 6.0 4 2 2 6 6 6 0 Bacterial protein of unknown function (DUF948) TPR_12 PF13424.6 ORF25570 - 6.6e-20 71.2 30.2 3.9e-07 30.3 6.2 5.0 3 2 2 5 5 5 5 Tetratricopeptide repeat PP-binding PF00550.25 ORF25570 - 9.5e-09 35.5 0.2 2e-08 34.5 0.2 1.6 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_2 PF07719.17 ORF25570 - 8.5e-06 25.5 28.8 1.1 9.5 1.1 8.6 8 1 0 8 8 8 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF25570 - 1.5e-05 24.5 22.7 0.0023 17.3 13.7 2.1 2 0 0 2 2 2 2 MalT-like TPR region ANAPC3 PF12895.7 ORF25570 - 0.00011 22.3 16.0 0.14 12.4 0.4 5.1 3 3 1 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 ORF25570 - 0.00097 19.6 26.9 0.68 10.5 3.7 5.5 4 1 1 5 5 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF25570 - 0.0018 18.9 31.2 6.2 7.9 0.0 7.5 6 1 1 7 7 7 2 Tetratricopeptide repeat PPR PF01535.20 ORF25570 - 0.0023 18.0 1.1 25 5.4 0.0 5.2 5 0 0 5 5 4 0 PPR repeat DUF627 PF04781.12 ORF25570 - 0.0071 16.4 9.4 3.5 7.7 0.3 4.4 4 0 0 4 4 4 1 Protein of unknown function (DUF627) TPR_16 PF13432.6 ORF25570 - 0.013 16.2 22.2 0.91 10.2 0.0 5.9 3 1 3 6 6 6 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF25570 - 0.021 14.8 19.1 7.2 6.9 0.1 7.1 7 0 0 7 7 7 0 Tetratricopeptide repeat TMEM72 PF16054.5 ORF25570 - 0.11 12.2 0.0 0.26 10.9 0.0 1.6 1 0 0 1 1 1 0 Transmembrane protein family 72 RPN7 PF10602.9 ORF25570 - 0.15 11.7 3.3 0.74 9.5 0.0 3.2 2 2 2 4 4 4 0 26S proteasome subunit RPN7 PPR_2 PF13041.6 ORF25570 - 0.25 11.6 0.6 74 3.7 0.0 3.8 3 0 0 3 3 3 0 PPR repeat family TPR_10 PF13374.6 ORF25570 - 2.9 7.9 23.4 7.2 6.6 0.0 6.7 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF25570 - 5.1 7.7 7.7 20 5.8 0.1 4.7 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF25570 - 8.8 6.8 26.0 8.5 6.9 0.1 7.4 8 1 1 9 9 9 0 Tetratricopeptide repeat Peptidase_M24 PF00557.24 ORF17840 - 3.8e-51 173.8 0.0 6.3e-51 173.0 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 AMP_N PF05195.16 ORF17840 - 2.2e-16 59.7 0.1 4.8e-16 58.6 0.1 1.6 1 0 0 1 1 1 1 Aminopeptidase P, N-terminal domain MGDG_synth PF06925.11 ORF17840 - 0.036 14.2 0.1 0.08 13.0 0.1 1.5 1 0 0 1 1 1 0 Monogalactosyldiacylglycerol (MGDG) synthase Asp PF00026.23 ORF142235 - 2.6e-18 66.5 0.9 4e-18 65.9 0.9 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF142235 - 0.014 15.2 0.0 0.048 13.4 0.0 1.8 1 1 1 2 2 2 0 Xylanase inhibitor C-terminal p450 PF00067.22 ORF136370 - 2.2e-48 165.2 1.7 2.7e-48 164.9 1.7 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF1896 PF08989.10 ORF136370 - 0.088 12.9 0.1 6.4 6.9 0.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1896) RicinB_lectin_2 PF14200.6 ORF124179 - 1.4 9.7 6.6 0.94 10.2 0.4 2.9 3 0 0 3 3 3 0 Ricin-type beta-trefoil lectin domain-like Evr1_Alr PF04777.13 ORF1078 - 0.061 13.8 0.1 0.15 12.5 0.1 1.6 1 0 0 1 1 1 0 Erv1 / Alr family Pkinase PF00069.25 ORF104665 - 3.3e-79 266.0 0.1 5.1e-79 265.3 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF104665 - 9.3e-44 149.6 0.0 1.4e-43 149.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF104665 - 1.3e-25 89.6 16.9 2.8e-12 46.9 2.3 4.5 4 0 0 4 4 4 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF104665 - 5.1e-25 85.1 25.6 3e-07 29.5 0.3 5.7 6 0 0 6 6 6 4 EF hand EF-hand_6 PF13405.6 ORF104665 - 1.8e-23 80.4 14.9 9.6e-07 28.3 0.1 5.6 5 0 0 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 ORF104665 - 3.2e-21 73.8 24.5 4.6e-06 25.9 0.2 6.0 6 0 0 6 6 6 4 EF hand EF-hand_8 PF13833.6 ORF104665 - 2.9e-14 52.7 23.5 1.1e-05 25.1 1.9 5.0 2 1 3 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF104665 - 1.1e-07 32.2 2.6 0.0024 18.2 0.4 2.6 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF104665 - 0.00016 21.1 0.0 0.0003 20.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF104665 - 0.00047 20.1 7.1 0.37 10.8 0.4 3.6 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Kinase-like PF14531.6 ORF104665 - 0.0062 15.9 0.0 0.015 14.6 0.0 1.7 1 1 0 1 1 1 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF104665 - 0.044 13.3 1.7 7.4 6.0 0.1 2.9 3 0 0 3 3 3 0 PhoP regulatory network protein YrbL PMBR PF09373.10 ORF104665 - 0.048 13.8 0.5 17 5.8 0.0 4.4 5 0 0 5 5 5 0 Pseudomurein-binding repeat APH PF01636.23 ORF104665 - 0.051 13.5 0.0 0.19 11.6 0.0 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_10 PF14788.6 ORF104665 - 0.5 10.3 8.5 1.4 8.8 0.2 4.5 4 1 1 5 5 5 0 EF hand Pkinase PF00069.25 ORF10311 - 3.3e-79 266.0 0.1 5.1e-79 265.3 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF10311 - 9.3e-44 149.6 0.0 1.4e-43 149.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF10311 - 1.3e-25 89.6 16.9 2.8e-12 46.9 2.3 4.5 4 0 0 4 4 4 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF10311 - 5.1e-25 85.1 25.6 3e-07 29.5 0.3 5.7 6 0 0 6 6 6 4 EF hand EF-hand_6 PF13405.6 ORF10311 - 1.8e-23 80.4 14.9 9.6e-07 28.3 0.1 5.6 5 0 0 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 ORF10311 - 3.2e-21 73.8 24.5 4.6e-06 25.9 0.2 6.0 6 0 0 6 6 6 4 EF hand EF-hand_8 PF13833.6 ORF10311 - 2.9e-14 52.7 23.5 1.1e-05 25.1 1.9 5.0 2 1 3 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF10311 - 1.1e-07 32.2 2.6 0.0024 18.2 0.4 2.6 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF10311 - 0.00016 21.1 0.0 0.0003 20.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF10311 - 0.00047 20.1 7.1 0.37 10.8 0.4 3.6 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Kinase-like PF14531.6 ORF10311 - 0.0062 15.9 0.0 0.015 14.6 0.0 1.7 1 1 0 1 1 1 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF10311 - 0.044 13.3 1.7 7.4 6.0 0.1 2.9 3 0 0 3 3 3 0 PhoP regulatory network protein YrbL PMBR PF09373.10 ORF10311 - 0.048 13.8 0.5 17 5.8 0.0 4.4 5 0 0 5 5 5 0 Pseudomurein-binding repeat APH PF01636.23 ORF10311 - 0.051 13.5 0.0 0.19 11.6 0.0 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_10 PF14788.6 ORF10311 - 0.5 10.3 8.5 1.4 8.8 0.2 4.5 4 1 1 5 5 5 0 EF hand Pkinase PF00069.25 ORF95108 - 4.1e-55 187.0 1.4 5.1e-55 186.7 0.2 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95108 - 1.4e-23 83.6 0.1 2.4e-23 82.7 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF95108 - 1.3e-07 31.3 0.1 8.8e-06 25.2 0.0 2.6 3 0 0 3 3 3 1 Kinase-like Haspin_kinase PF12330.8 ORF95108 - 0.00096 18.2 0.0 0.0017 17.3 0.0 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF95108 - 0.0021 16.9 0.0 0.004 16.0 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF95108 - 0.013 14.9 0.0 0.027 13.8 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Phage_connect_1 PF05135.13 ORF95108 - 0.1 13.1 1.9 1.1 9.8 0.3 2.6 2 0 0 2 2 2 0 Phage gp6-like head-tail connector protein APH PF01636.23 ORF95108 - 0.19 11.6 0.0 0.46 10.4 0.0 1.6 1 0 0 1 1 1 0 Phosphotransferase enzyme family zf-RING_2 PF13639.6 ORF92501 - 6.5e-11 42.4 11.3 6.5e-11 42.4 11.3 2.1 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF92501 - 5.6e-10 39.4 10.9 1.2e-09 38.3 10.9 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF92501 - 1.1e-05 25.2 11.5 3.1e-05 23.8 11.5 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF92501 - 4.5e-05 23.3 10.2 0.00011 22.1 10.2 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF92501 - 0.00023 20.9 16.6 0.0023 17.7 16.6 2.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF92501 - 0.00034 20.6 8.1 0.00065 19.7 6.8 2.3 2 0 0 2 2 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF92501 - 0.00045 20.2 5.8 0.001 19.1 5.8 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF92501 - 0.0022 17.8 12.4 0.0022 17.8 12.4 2.6 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF92501 - 0.0089 15.8 11.5 0.083 12.6 11.5 2.7 1 1 0 1 1 1 1 RING-like zinc finger FANCL_C PF11793.8 ORF92501 - 0.011 15.9 13.2 0.053 13.7 11.4 2.9 2 1 0 2 2 2 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF92501 - 0.016 15.1 10.3 0.082 12.8 10.4 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 PIRT PF15099.6 ORF92501 - 0.031 13.9 0.0 0.074 12.6 0.0 1.7 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Zn_ribbon_17 PF17120.5 ORF92501 - 0.31 10.7 11.2 1.5 8.5 10.4 2.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type Peptidase_M17 PF00883.21 ORF82144 - 4.7e-88 295.5 0.0 5.9e-88 295.1 0.0 1.1 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain SART-1 PF03343.13 ORF76841 - 1.7e-25 89.7 5.6 2.5e-25 89.2 5.6 1.1 1 0 0 1 1 1 1 SART-1 family Pkinase PF00069.25 ORF48580 - 4.1e-55 187.0 1.4 5.1e-55 186.7 0.2 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF48580 - 1.4e-23 83.6 0.1 2.4e-23 82.7 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF48580 - 1.3e-07 31.3 0.1 8.8e-06 25.2 0.0 2.6 3 0 0 3 3 3 1 Kinase-like Haspin_kinase PF12330.8 ORF48580 - 0.00096 18.2 0.0 0.0017 17.3 0.0 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF48580 - 0.0021 16.9 0.0 0.004 16.0 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF48580 - 0.013 14.9 0.0 0.027 13.8 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Phage_connect_1 PF05135.13 ORF48580 - 0.1 13.1 1.9 1.1 9.8 0.3 2.6 2 0 0 2 2 2 0 Phage gp6-like head-tail connector protein APH PF01636.23 ORF48580 - 0.19 11.6 0.0 0.46 10.4 0.0 1.6 1 0 0 1 1 1 0 Phosphotransferase enzyme family RRM_1 PF00076.22 ORF46415 - 4.7e-30 103.2 0.0 7.5e-12 44.9 0.0 3.4 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Biotin_carb_C PF02785.19 ORF43934 - 0.14 12.2 0.0 0.3 11.2 0.0 1.5 1 0 0 1 1 1 0 Biotin carboxylase C-terminal domain DUF5082 PF16888.5 ORF43934 - 0.22 11.8 3.3 13 6.1 0.4 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF5082) bZIP_2 PF07716.15 ORF43934 - 2.5 8.2 11.6 12 6.0 4.7 3.0 3 0 0 3 3 3 0 Basic region leucine zipper HALZ PF02183.18 ORF43934 - 3.1 8.1 6.1 0.64 10.3 2.0 2.0 2 0 0 2 2 2 0 Homeobox associated leucine zipper Torus PF16131.5 ORF42314 - 1.3e-17 64.4 8.6 0.00061 20.5 0.0 4.4 4 0 0 4 4 4 4 Torus domain zf_CCCH_4 PF18345.1 ORF42314 - 4.3e-16 58.4 33.5 1.7e-05 24.7 3.5 4.6 4 0 0 4 4 4 4 Zinc finger domain zf-CCCH PF00642.24 ORF42314 - 1.5e-15 56.6 27.6 1e-06 28.5 2.1 4.8 4 0 0 4 4 4 4 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF42314 - 6.6e-12 44.9 24.7 4e-05 23.3 3.6 4.7 4 0 0 4 4 4 4 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF42314 - 1.8e-08 34.5 9.0 0.095 12.9 0.0 4.4 4 0 0 4 4 4 3 Zinc-finger containing family zf-CCCH_2 PF14608.6 ORF42314 - 1.1e-07 32.0 27.1 0.082 13.4 3.8 4.8 4 0 0 4 4 4 4 RNA-binding, Nab2-type zinc finger Ion_trans PF00520.31 ORF3658 - 4.7e-19 68.6 5.8 6.6e-19 68.1 5.8 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF3658 - 9.7e-12 43.6 2.0 1.7e-05 24.1 0.4 2.5 2 0 0 2 2 2 2 EF hand Ion_trans_2 PF07885.16 ORF3658 - 3.2e-11 43.0 2.9 6.9e-11 42.0 2.9 1.6 1 0 0 1 1 1 1 Ion channel EF-hand_8 PF13833.6 ORF3658 - 5.3e-11 42.2 2.9 6.5e-06 25.9 0.1 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF3658 - 1.5e-10 40.2 1.3 0.00071 19.3 0.2 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF3658 - 6e-08 31.8 3.0 0.0054 16.2 0.1 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF3658 - 9.9e-08 32.3 0.5 3e-07 30.8 0.5 1.8 1 1 0 1 1 1 1 EF-hand domain pair PKD_channel PF08016.12 ORF3658 - 0.0041 15.8 4.6 0.0067 15.1 4.6 1.2 1 0 0 1 1 1 1 Polycystin cation channel Melibiase_2 PF16499.5 ORF35007 - 3e-09 36.5 0.1 1.3e-08 34.4 0.0 2.0 2 1 0 2 2 2 1 Alpha galactosidase A Melibiase_C PF17801.1 ORF35007 - 7.7e-07 29.1 0.0 1.7e-06 28.0 0.0 1.6 1 0 0 1 1 1 1 Alpha galactosidase C-terminal beta sandwich domain OxoDH_E1alpha_N PF12573.8 ORF35007 - 0.089 12.6 0.6 2.2 8.1 0.2 2.4 2 0 0 2 2 2 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal Ricin_B_lectin PF00652.22 ORF35007 - 0.21 11.8 2.2 4.8 7.5 0.1 3.1 3 1 0 3 3 3 0 Ricin-type beta-trefoil lectin domain Pkinase PF00069.25 ORF1635 - 4.1e-55 187.0 1.4 5.1e-55 186.7 0.2 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF1635 - 1.4e-23 83.6 0.1 2.4e-23 82.7 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF1635 - 1.3e-07 31.3 0.1 8.8e-06 25.2 0.0 2.6 3 0 0 3 3 3 1 Kinase-like Haspin_kinase PF12330.8 ORF1635 - 0.00096 18.2 0.0 0.0017 17.3 0.0 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF1635 - 0.0021 16.9 0.0 0.004 16.0 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF1635 - 0.013 14.9 0.0 0.027 13.8 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Phage_connect_1 PF05135.13 ORF1635 - 0.1 13.1 1.9 1.1 9.8 0.3 2.6 2 0 0 2 2 2 0 Phage gp6-like head-tail connector protein APH PF01636.23 ORF1635 - 0.19 11.6 0.0 0.46 10.4 0.0 1.6 1 0 0 1 1 1 0 Phosphotransferase enzyme family Aa_trans PF01490.18 ORF148422 - 4.1e-59 200.3 35.9 4.8e-59 200.1 35.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein RRM_2 PF04059.12 ORF124313 - 6.6e-20 71.1 0.0 9.7e-20 70.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF124313 - 0.019 14.8 0.0 0.058 13.2 0.0 1.8 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TSC22 PF01166.18 ORF124313 - 0.085 13.2 0.2 0.17 12.2 0.2 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family ATP-synt_ab PF00006.25 ORF122247 - 1.8e-66 223.9 0.0 2.5e-66 223.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 ORF122247 - 6.3e-13 49.0 0.6 1.2e-12 48.1 0.6 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain Rad10 PF03834.14 ORF122247 - 0.16 12.0 0.0 0.3 11.1 0.0 1.4 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) MFS_1 PF07690.16 ORF112636 - 4.7e-32 111.3 29.4 1.7e-29 102.9 18.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily AMP-binding PF00501.28 ORF109769 - 1.5e-57 195.1 0.0 1.8e-57 194.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF109769 - 7.3e-08 33.3 0.0 1.6e-07 32.2 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 ORF109769 - 9.7e-05 21.4 0.0 0.0059 15.5 0.0 2.1 2 0 0 2 2 2 2 GH3 auxin-responsive promoter UDPGP PF01704.18 ORF89846 - 2.5e-33 115.3 0.8 3.4e-33 114.9 0.8 1.1 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase NTP_transf_3 PF12804.7 ORF89846 - 0.0099 16.2 0.0 0.017 15.5 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Swi5 PF07061.11 ORF89846 - 0.056 13.5 0.1 5.3 7.2 0.1 2.9 2 0 0 2 2 2 0 Swi5 MIP-T3 PF10243.9 ORF86703 - 1.6 8.7 7.2 1.8 8.6 0.2 3.3 3 1 1 4 4 4 0 Microtubule-binding protein MIP-T3 CH-like domain UDPGP PF01704.18 ORF84271 - 2.5e-33 115.3 0.8 3.4e-33 114.9 0.8 1.1 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase NTP_transf_3 PF12804.7 ORF84271 - 0.0099 16.2 0.0 0.017 15.5 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Swi5 PF07061.11 ORF84271 - 0.056 13.5 0.1 5.3 7.2 0.1 2.9 2 0 0 2 2 2 0 Swi5 Octopine_DH PF02317.17 ORF7876 - 5.9e-36 123.8 0.0 9.1e-36 123.2 0.0 1.3 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain ApbA PF02558.16 ORF7876 - 0.00094 18.8 0.0 0.0017 18.0 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA SURNod19 PF07712.12 ORF65985 - 2.3e-19 69.4 4.1 7.7e-15 54.5 1.9 2.8 2 1 0 2 2 2 2 Stress up-regulated Nod 19 Acatn PF13000.7 ORF54560 - 3.4e-48 164.5 34.6 2e-45 155.4 16.9 4.0 1 1 3 4 4 4 3 Acetyl-coenzyme A transporter 1 MFS_1 PF07690.16 ORF54560 - 1e-10 41.1 3.7 1e-10 41.1 3.7 2.3 1 1 1 2 2 2 1 Major Facilitator Superfamily IBR PF01485.21 ORF48550 - 2.6e-21 75.6 36.8 3.9e-12 46.2 17.0 5.4 3 1 1 4 4 4 2 IBR domain, a half RING-finger domain zf-C3HC4_2 PF13923.6 ORF48550 - 7e-05 22.6 4.3 7e-05 22.6 4.3 6.1 4 2 2 6 6 6 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF48550 - 0.00058 20.1 50.2 0.0042 17.4 8.4 4.7 5 1 0 5 5 5 3 Ring finger domain zf-RING_UBOX PF13445.6 ORF48550 - 0.0016 18.4 4.8 0.0016 18.4 4.8 4.8 3 3 1 4 4 4 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF48550 - 0.0032 17.3 9.0 0.0032 17.3 9.0 6.3 4 3 2 6 6 6 2 Zinc finger, C3HC4 type (RING finger) TRAF6_Z2 PF18048.1 ORF48550 - 0.059 13.5 9.6 0.18 11.9 9.6 1.9 1 0 0 1 1 1 0 TNF receptor-associated factor 6 zinc finger 2 Ank_2 PF12796.7 ORF27518 - 6.7e-11 42.6 0.1 1.9e-07 31.6 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF27518 - 3.4e-08 33.9 0.0 0.013 16.1 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF27518 - 6.3e-06 26.4 1.1 0.58 10.7 0.0 4.3 4 1 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF27518 - 1.2e-05 25.5 0.3 0.07 13.5 0.1 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF27518 - 1.2e-05 25.3 0.1 0.19 12.4 0.0 3.2 2 1 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF2689 - 6.7e-11 42.6 0.1 1.9e-07 31.6 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF2689 - 3.4e-08 33.9 0.0 0.013 16.1 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF2689 - 6.3e-06 26.4 1.1 0.58 10.7 0.0 4.3 4 1 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF2689 - 1.2e-05 25.5 0.3 0.07 13.5 0.1 2.5 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF2689 - 1.2e-05 25.3 0.1 0.19 12.4 0.0 3.2 2 1 0 2 2 2 2 Ankyrin repeat Choline_transpo PF04515.12 ORF22502 - 3.9e-30 105.2 10.2 5e-30 104.8 10.2 1.1 1 0 0 1 1 1 1 Plasma-membrane choline transporter Lebercilin PF15619.6 ORF17033 - 0.0054 16.4 6.3 0.0054 16.4 6.3 3.9 2 1 1 3 3 3 1 Ciliary protein causing Leber congenital amaurosis disease DUF4055 PF13264.6 ORF17033 - 1.2 9.2 9.5 0.13 12.4 1.6 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4055) zf-B_box PF00643.24 ORF120939 - 0.12 12.5 7.8 0.036 14.2 4.0 2.0 2 0 0 2 2 2 0 B-box zinc finger Pepsin-I3 PF06394.13 ORF120939 - 0.13 12.5 2.1 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 Pepsin inhibitor-3-like repeated domain DUF2433 PF10360.9 ORF120939 - 0.78 9.8 6.9 0.22 11.7 0.7 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF2433) FBA_2 PF07735.17 ORF120939 - 2 8.6 5.8 17 5.6 2.3 3.6 2 1 0 2 2 2 0 F-box associated DUF4047 PF13256.6 ORF120939 - 7.2 6.8 17.2 1.5 9.0 11.2 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF4047) Lebercilin PF15619.6 ORF113624 - 0.0054 16.4 6.3 0.0054 16.4 6.3 3.9 2 1 1 3 3 3 1 Ciliary protein causing Leber congenital amaurosis disease DUF4055 PF13264.6 ORF113624 - 1.2 9.2 9.5 0.13 12.4 1.6 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4055) RRM_2 PF04059.12 ORF107203 - 6.5e-20 71.1 0.0 9.7e-20 70.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF107203 - 0.029 14.2 0.0 0.058 13.2 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TSC22 PF01166.18 ORF107203 - 0.085 13.2 0.2 0.17 12.2 0.2 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family CompInhib_SCIN PF11546.8 ORF106820 - 0.005 16.9 9.0 0.05 13.6 6.9 2.9 2 0 0 2 2 2 1 Staphylococcal complement inhibitor SCIN zf-B_box PF00643.24 ORF106820 - 0.12 12.5 7.8 0.036 14.2 4.0 2.0 2 0 0 2 2 2 0 B-box zinc finger DUF4047 PF13256.6 ORF106820 - 0.24 11.6 10.4 0.81 9.9 10.4 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4047) DUF2433 PF10360.9 ORF106820 - 0.46 10.6 5.3 1.2 9.3 3.2 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2433) FBA_2 PF07735.17 ORF106820 - 1.8 8.7 5.8 17 5.6 2.3 3.7 2 1 0 2 2 2 0 F-box associated Kelch_4 PF13418.6 ORF93010 - 1.2e-17 63.7 1.4 1.7e-05 24.7 0.0 5.5 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF93010 - 5.4e-17 61.1 2.1 1.6e-06 27.6 0.1 4.9 5 0 0 5 5 5 3 Kelch motif Kelch_6 PF13964.6 ORF93010 - 9.3e-16 57.5 0.6 0.00039 20.6 0.0 5.3 4 1 1 5 5 5 3 Kelch motif Kelch_3 PF13415.6 ORF93010 - 5.5e-15 55.2 0.3 2.1e-06 27.9 0.0 3.4 3 1 0 3 3 3 2 Galactose oxidase, central domain zf-B_box PF00643.24 ORF93010 - 9.1e-09 35.3 2.7 3e-08 33.7 2.7 2.0 1 0 0 1 1 1 1 B-box zinc finger Kelch_5 PF13854.6 ORF93010 - 6.6e-07 29.2 0.3 0.57 10.2 0.1 3.6 3 0 0 3 3 3 3 Kelch motif Kelch_2 PF07646.15 ORF93010 - 0.0047 16.9 0.1 5 7.3 0.0 3.7 3 1 0 3 3 3 1 Kelch motif WYL_2 PF10902.8 ORF93010 - 0.062 13.7 2.9 11 6.5 0.2 3.3 3 0 0 3 3 3 0 WYL_2, Sm-like SH3 beta-barrel fold DUF5371 PF17341.2 ORF93010 - 0.13 12.4 2.5 0.37 11.0 0.2 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5371) HlyD_3 PF13437.6 ORF86374 - 7.6e-18 65.2 0.6 1.1e-12 48.5 0.0 2.6 2 0 0 2 2 2 2 HlyD family secretion protein HlyD_D23 PF16576.5 ORF86374 - 1.4e-13 50.6 11.4 1.9e-11 43.6 11.3 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 ORF86374 - 1.6e-10 40.6 1.0 1.6e-10 40.6 1.0 2.3 2 1 0 2 2 2 1 Biotin-lipoyl like HlyD PF00529.20 ORF86374 - 2.4e-07 30.5 0.6 3.4e-07 30.1 0.6 1.1 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 ORF86374 - 0.00025 20.8 0.2 0.0057 16.5 0.1 2.4 2 0 0 2 2 2 1 Biotin-requiring enzyme Peptidase_M23 PF01551.22 ORF86374 - 0.034 14.4 0.0 0.16 12.2 0.0 2.0 2 0 0 2 2 2 0 Peptidase family M23 PTS_EIIA_1 PF00358.20 ORF86374 - 0.043 13.6 0.1 0.13 12.1 0.1 1.7 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HlyD_2 PF12700.7 ORF86374 - 0.044 12.5 0.2 0.13 11.0 0.2 1.7 1 1 0 1 1 1 0 HlyD family secretion protein CARD_2 PF16739.5 ORF86374 - 0.099 12.6 0.3 0.28 11.2 0.3 1.7 1 0 0 1 1 1 0 Caspase recruitment domain DUF2605 PF10792.9 ORF86374 - 1.3 9.0 8.8 0.42 10.6 2.4 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF2605) FliJ PF02050.16 ORF86374 - 2.6 8.3 23.6 0.96 9.7 17.2 2.2 1 1 1 2 2 2 0 Flagellar FliJ protein DUF4407 PF14362.6 ORF86374 - 3.2 7.0 24.5 7 5.9 24.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Asp PF00026.23 ORF86282 - 5.1e-17 62.3 0.0 9.6e-17 61.4 0.0 1.4 1 1 0 1 1 1 1 Eukaryotic aspartyl protease ATP-sulfurylase PF01747.17 ORF73072 - 9.9e-66 221.2 0.0 1.4e-65 220.7 0.0 1.2 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.6 ORF73072 - 1.8e-41 141.4 0.0 3e-41 140.7 0.0 1.3 1 0 0 1 1 1 1 PUA-like domain PHD_4 PF16866.5 ORF67777 - 1.1 9.4 6.9 2 8.5 1.0 2.8 1 1 1 2 2 2 0 PHD-finger LBP_BPI_CETP_C PF02886.17 ORF67015 - 5.8e-05 22.7 0.1 0.0001 21.9 0.1 1.4 1 0 0 1 1 1 1 LBP / BPI / CETP family, C-terminal domain DUF3971 PF13116.6 ORF67015 - 0.094 12.3 0.3 0.78 9.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function Ammonium_transp PF00909.21 ORF61783 - 7.2e-116 387.2 25.3 8.4e-116 386.9 25.3 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family MFS_1 PF07690.16 ORF59971 - 1e-25 90.4 29.1 3.6e-15 55.7 8.7 2.1 1 1 0 2 2 2 2 Major Facilitator Superfamily MASE5 PF17178.4 ORF59971 - 0.13 12.0 15.9 0.089 12.6 1.2 3.5 3 0 0 3 3 3 0 Membrane-associated sensor PHD_4 PF16866.5 ORF56766 - 1.1 9.4 6.9 2 8.5 1.0 2.8 1 1 1 2 2 2 0 PHD-finger p450 PF00067.22 ORF47613 - 6.1e-11 41.7 0.0 1.1e-10 40.9 0.0 1.3 1 0 0 1 1 1 1 Cytochrome P450 KH_1 PF00013.29 ORF39559 - 0.0032 17.2 0.0 0.007 16.2 0.0 1.5 1 0 0 1 1 1 1 KH domain DUF3824 PF12868.7 ORF39559 - 0.012 16.3 7.5 0.012 16.3 7.5 2.8 3 0 0 3 3 3 0 Domain of unknwon function (DUF3824) RskA PF10099.9 ORF39559 - 1.8 8.9 14.0 4 7.7 14.0 1.6 1 0 0 1 1 1 0 Anti-sigma-K factor rskA Shisa PF13908.6 ORF31840 - 0.0029 17.9 1.0 0.013 15.8 0.4 2.2 2 0 0 2 2 2 1 Wnt and FGF inhibitory regulator Antimicrobial12 PF08107.11 ORF31840 - 0.2 11.4 3.3 0.33 10.7 3.3 1.3 1 0 0 1 1 1 0 Pleurocidin family PTH2 PF01981.16 ORF31840 - 0.66 10.3 4.3 0.3 11.4 0.2 2.5 2 1 1 3 3 3 0 Peptidyl-tRNA hydrolase PTH2 DUF1461 PF07314.11 ORF31840 - 3.3 7.6 7.3 35 4.2 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1461) V-ATPase_G_2 PF16999.5 ORF31840 - 3.4 8.1 13.5 5.1 7.6 6.7 3.2 1 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit Shisa PF13908.6 ORF29548 - 0.0031 17.8 1.0 0.014 15.7 0.5 2.2 2 0 0 2 2 2 1 Wnt and FGF inhibitory regulator Antimicrobial12 PF08107.11 ORF29548 - 0.2 11.4 3.3 0.33 10.7 3.3 1.3 1 0 0 1 1 1 0 Pleurocidin family PTH2 PF01981.16 ORF29548 - 0.63 10.3 4.3 0.3 11.4 0.2 2.6 2 1 1 3 3 3 0 Peptidyl-tRNA hydrolase PTH2 DUF1461 PF07314.11 ORF29548 - 3.3 7.6 7.3 35 4.2 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1461) V-ATPase_G_2 PF16999.5 ORF29548 - 3.5 8.1 13.5 5.1 7.6 6.7 3.2 1 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit RINGv PF12906.7 ORF2919 - 7.3e-13 48.4 10.6 2e-12 47.0 10.6 1.8 1 0 0 1 1 1 1 RING-variant domain FHA PF00498.26 ORF2919 - 3.7e-11 43.2 0.9 1.4e-09 38.2 0.5 3.4 3 1 0 3 3 3 1 FHA domain Yop-YscD_cpl PF16697.5 ORF2919 - 6.3e-05 23.2 0.2 0.00043 20.5 0.1 2.4 3 0 0 3 3 3 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 ORF2919 - 0.016 15.4 7.6 0.034 14.3 7.6 1.5 1 0 0 1 1 1 0 FANCL C-terminal domain Tox-URI2 PF15653.6 ORF2919 - 0.043 14.1 0.3 8.3 6.8 0.1 3.4 3 0 0 3 3 3 0 URI fold toxin 2 zf-RING_2 PF13639.6 ORF2919 - 0.063 13.6 8.8 0.24 11.8 8.8 2.1 1 0 0 1 1 1 0 Ring finger domain MU2_FHA PF18221.1 ORF2919 - 0.091 12.8 0.0 0.23 11.5 0.0 1.7 1 0 0 1 1 1 0 Mutator 2 Fork head associated domain mTERF PF02536.14 ORF22437 - 0.053 12.4 0.0 0.15 10.9 0.0 1.7 2 0 0 2 2 2 0 mTERF AAA PF00004.29 ORF148137 - 4.5e-54 182.4 0.0 1.5e-39 135.5 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF148137 - 3.5e-12 47.0 0.0 0.00019 21.9 0.0 3.0 2 1 1 3 3 3 2 AAA ATPase domain AAA_22 PF13401.6 ORF148137 - 2.5e-10 40.7 1.3 0.00048 20.4 0.0 4.2 2 2 2 4 4 4 2 AAA domain AAA_5 PF07728.14 ORF148137 - 5.9e-09 36.1 0.0 0.00036 20.5 0.1 3.1 2 1 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_lid_3 PF17862.1 ORF148137 - 2.3e-08 33.7 0.0 1.2e-07 31.4 0.0 2.2 1 1 1 2 2 2 1 AAA+ lid domain AAA_2 PF07724.14 ORF148137 - 4.9e-08 33.3 0.0 1.3e-05 25.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) RNA_helicase PF00910.22 ORF148137 - 1.2e-07 32.0 0.0 0.026 14.9 0.0 3.2 3 0 0 3 3 2 2 RNA helicase AAA_14 PF13173.6 ORF148137 - 4e-07 30.1 0.0 0.0025 17.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 ORF148137 - 5.5e-07 29.8 0.0 0.025 14.8 0.0 2.5 2 1 0 2 2 2 2 AAA domain NACHT PF05729.12 ORF148137 - 2.6e-06 27.5 0.1 0.13 12.2 0.0 3.4 4 0 0 4 4 4 2 NACHT domain TsaE PF02367.17 ORF148137 - 3.5e-06 27.0 0.0 0.041 13.9 0.0 2.3 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 ORF148137 - 3.9e-06 27.4 0.0 0.0031 18.0 0.0 2.6 2 0 0 2 2 2 1 ABC transporter RuvB_N PF05496.12 ORF148137 - 5.2e-06 26.3 0.0 0.02 14.6 0.0 2.8 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain ATPase_2 PF01637.18 ORF148137 - 8e-06 25.9 0.1 3.1 7.7 0.0 4.0 2 2 2 4 4 4 1 ATPase domain predominantly from Archaea AAA_28 PF13521.6 ORF148137 - 8.4e-06 26.1 0.0 0.062 13.5 0.0 2.3 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 ORF148137 - 1.9e-05 24.2 0.0 0.0013 18.2 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF148137 - 3.4e-05 23.2 0.0 0.14 11.3 0.0 2.2 2 0 0 2 2 2 2 TIP49 P-loop domain Sigma54_activat PF00158.26 ORF148137 - 6.1e-05 22.8 0.0 0.28 10.9 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_7 PF12775.7 ORF148137 - 6.7e-05 22.5 0.0 0.034 13.7 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_24 PF13479.6 ORF148137 - 7.3e-05 22.6 0.2 0.015 15.1 0.0 2.8 2 2 0 2 2 2 1 AAA domain TniB PF05621.11 ORF148137 - 0.00013 21.4 0.1 2 7.8 0.0 4.2 3 2 1 4 4 4 1 Bacterial TniB protein AAA_18 PF13238.6 ORF148137 - 0.00015 22.3 0.0 0.06 13.9 0.0 2.7 3 0 0 3 3 2 1 AAA domain NB-ARC PF00931.22 ORF148137 - 0.00044 19.5 0.0 0.2 10.8 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain ATPase PF06745.13 ORF148137 - 0.00066 19.1 0.1 0.11 11.8 0.0 2.6 2 1 0 2 2 2 1 KaiC AAA_25 PF13481.6 ORF148137 - 0.00077 19.1 2.6 0.76 9.3 0.1 3.8 3 1 1 4 4 4 1 AAA domain AAA_3 PF07726.11 ORF148137 - 0.0021 17.9 0.0 0.11 12.3 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.22 ORF148137 - 0.0025 17.5 0.1 0.84 9.2 0.0 2.9 3 0 0 3 3 2 1 SRP54-type protein, GTPase domain SKI PF01202.22 ORF148137 - 0.003 17.7 0.1 0.88 9.7 0.0 2.7 3 0 0 3 3 3 1 Shikimate kinase AAA_30 PF13604.6 ORF148137 - 0.0034 17.1 0.0 0.039 13.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF148137 - 0.0039 17.0 0.0 0.38 10.5 0.0 2.5 2 0 0 2 2 2 1 IstB-like ATP binding protein Bac_DnaA PF00308.18 ORF148137 - 0.0051 16.7 0.0 0.23 11.3 0.0 2.8 3 0 0 3 3 3 1 Bacterial dnaA protein Rad17 PF03215.15 ORF148137 - 0.0077 16.2 0.0 1.8 8.4 0.0 2.9 2 0 0 2 2 2 1 Rad17 P-loop domain DUF2075 PF09848.9 ORF148137 - 0.0079 15.5 0.0 0.066 12.4 0.0 2.1 2 1 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) DAP3 PF10236.9 ORF148137 - 0.011 14.9 0.1 0.83 8.8 0.0 3.1 3 1 1 4 4 4 0 Mitochondrial ribosomal death-associated protein 3 AAA_17 PF13207.6 ORF148137 - 0.012 16.0 0.0 2.9 8.3 0.0 2.5 2 0 0 2 2 2 0 AAA domain Sigma54_activ_2 PF14532.6 ORF148137 - 0.013 15.6 0.0 5.7 7.1 0.0 2.6 2 0 0 2 2 2 0 Sigma-54 interaction domain ResIII PF04851.15 ORF148137 - 0.015 15.3 0.1 2.5 8.1 0.1 2.8 2 1 1 3 3 3 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 ORF148137 - 0.018 15.4 0.0 0.11 12.8 0.0 2.2 2 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF148137 - 0.023 14.0 0.0 4.2 6.6 0.0 2.6 2 0 0 2 2 2 0 Zeta toxin DUF815 PF05673.13 ORF148137 - 0.038 13.1 0.0 3.3 6.8 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF815) AAA_11 PF13086.6 ORF148137 - 0.051 13.4 0.0 0.21 11.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF148137 - 0.051 13.0 0.0 1.5 8.2 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein ATP-synt_ab PF00006.25 ORF148137 - 0.068 12.8 0.0 7 6.2 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain CbiA PF01656.23 ORF148137 - 0.1 12.7 0.0 17 5.5 0.0 2.6 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain IPT PF01745.16 ORF148137 - 0.12 11.8 0.0 18 4.6 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase AAA_13 PF13166.6 ORF148137 - 0.14 10.8 0.0 3.8 6.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain Parvo_NS1 PF01057.17 ORF148137 - 0.22 10.6 0.0 0.59 9.2 0.0 1.6 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 TrkH PF02386.16 ORF147222 - 3.6e-93 312.7 16.1 6e-93 312.0 16.1 1.3 1 0 0 1 1 1 1 Cation transport protein Serpentine_r_xa PF03383.15 ORF147222 - 0.01 15.8 1.6 0.026 14.5 0.6 2.3 2 0 0 2 2 2 1 Caenorhabditis serpentine receptor-like protein, class xa Ammonium_transp PF00909.21 ORF146743 - 7.2e-116 387.2 25.3 8.4e-116 386.9 25.3 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family MFS_1 PF07690.16 ORF132787 - 1.1e-21 77.2 27.5 1.1e-21 77.2 27.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF132787 - 5.4e-12 45.0 3.6 5.4e-12 45.0 3.6 3.1 2 1 1 3 3 3 2 MFS/sugar transport protein Vma12 PF11712.8 ORF132787 - 4 7.5 9.5 29 4.7 7.0 3.0 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Shisa PF13908.6 ORF130320 - 0.0025 18.1 1.3 0.011 16.1 0.6 2.2 2 0 0 2 2 2 1 Wnt and FGF inhibitory regulator Antimicrobial12 PF08107.11 ORF130320 - 0.2 11.4 3.3 0.33 10.7 3.3 1.3 1 0 0 1 1 1 0 Pleurocidin family PTH2 PF01981.16 ORF130320 - 0.7 10.2 4.4 0.3 11.4 0.2 2.5 2 1 1 3 3 3 0 Peptidyl-tRNA hydrolase PTH2 DUF1461 PF07314.11 ORF130320 - 2.6 7.9 7.0 33 4.3 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1461) V-ATPase_G_2 PF16999.5 ORF130320 - 3.9 7.9 13.5 5.1 7.6 6.7 3.1 1 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit Apolipoprotein PF01442.18 ORF128191 - 5.9e-06 26.3 0.0 1.1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain TPR_19 PF14559.6 ORF12516 - 3.4e-08 33.9 8.6 0.95 10.0 0.6 5.0 4 1 0 4 4 4 4 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF12516 - 4.8e-07 29.9 8.6 0.29 11.4 0.1 4.8 5 1 0 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 HrpB1_HrpK PF09613.10 ORF12516 - 0.00025 20.7 0.2 0.14 11.8 0.0 3.4 1 1 2 3 3 3 1 Bacterial type III secretion protein (HrpB1_HrpK) TPR_6 PF13174.6 ORF12516 - 0.002 18.6 2.8 2.6 8.9 0.0 5.2 6 0 0 6 6 5 1 Tetratricopeptide repeat PPR_2 PF13041.6 ORF12516 - 0.0049 17.0 0.5 0.029 14.5 0.2 2.5 3 0 0 3 3 3 1 PPR repeat family TPR_14 PF13428.6 ORF12516 - 0.0079 16.9 0.0 82 4.4 0.0 4.6 4 1 1 5 5 5 0 Tetratricopeptide repeat RasGEF_N PF00618.20 ORF12516 - 0.021 15.1 1.8 0.78 10.0 0.0 3.4 3 0 0 3 3 3 0 RasGEF N-terminal motif TPR_8 PF13181.6 ORF12516 - 0.083 13.1 14.3 1.5 9.2 0.1 5.9 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF12516 - 0.1 12.8 7.2 12 6.3 0.0 6.0 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF12516 - 0.12 11.7 2.6 3.8 6.8 1.1 2.9 3 1 0 3 3 3 0 MalT-like TPR region PriA_C PF18074.1 ORF12516 - 1.2 10.1 7.6 0.92 10.4 0.6 4.1 3 1 1 4 4 4 0 Primosomal protein N C-terminal domain Prp18 PF02840.15 ORF12516 - 1.5 8.8 5.3 1.3 9.0 2.6 2.4 2 0 0 2 2 2 0 Prp18 domain Oxysterol_BP PF01237.18 ORF124355 - 3.7e-40 137.9 3.3 3.2e-39 134.9 3.3 2.1 1 1 0 1 1 1 1 Oxysterol-binding protein POT1 PF02765.17 ORF116512 - 2.5e-39 134.4 0.6 2.9e-36 124.4 0.3 2.4 2 0 0 2 2 2 2 Telomeric single stranded DNA binding POT1/CDC13 Lyase_8 PF02278.18 ORF109028 - 0.074 12.5 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Polysaccharide lyase family 8, super-sandwich domain dsRBD2 PF17842.1 ORF105689 - 0.05 13.8 0.4 0.81 9.9 0.1 2.5 2 1 0 2 2 2 0 Double-stranded RNA binding domain 2 MCR_alpha_N PF02745.15 ORF104106 - 0.0052 16.2 0.0 0.0052 16.2 0.0 2.6 3 1 1 4 4 4 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain CrgA PF06781.12 ORF104106 - 1.5 9.0 0.0 1.5 9.0 0.0 3.1 2 1 0 2 2 2 0 Cell division protein CrgA DUF4577 PF15145.6 ORF103924 - 1.5 8.9 4.7 1 9.4 1.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4577) ATP-synt_ab PF00006.25 ORF96711 - 2.1e-61 207.3 0.0 3.6e-61 206.5 0.0 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 ORF96711 - 1.4e-21 76.8 1.9 3e-21 75.7 1.9 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA PF00004.29 ORF96711 - 0.014 15.9 0.0 0.42 11.0 0.0 2.4 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 ORF96711 - 0.039 13.1 0.1 0.068 12.3 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain RsgA_GTPase PF03193.16 ORF96711 - 0.039 13.8 0.0 0.081 12.8 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase ATPase_2 PF01637.18 ORF96711 - 0.045 13.7 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ATPase PF06745.13 ORF96711 - 0.045 13.1 0.1 0.079 12.3 0.1 1.4 1 0 0 1 1 1 0 KaiC ABC_tran PF00005.27 ORF96711 - 0.064 13.8 0.1 0.7 10.4 0.1 2.3 2 0 0 2 2 2 0 ABC transporter YdaS_antitoxin PF15943.5 ORF96711 - 0.088 12.7 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT AAA_19 PF13245.6 ORF96711 - 0.09 13.1 0.5 0.28 11.5 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF96711 - 0.11 12.9 0.0 0.23 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 ORF96711 - 0.16 11.9 0.0 0.37 10.7 0.0 1.6 1 0 0 1 1 1 0 NACHT domain FtsX_ECD PF18075.1 ORF95264 - 0.26 11.9 6.4 0.1 13.2 2.6 2.4 2 0 0 2 2 2 0 FtsX extracellular domain Sec23_trunk PF04811.15 ORF93866 - 6.5e-10 39.0 0.0 1.8e-09 37.5 0.0 1.8 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Img2 PF05046.14 ORF93866 - 0.013 15.8 0.1 0.53 10.6 0.1 3.0 2 0 0 2 2 2 0 Mitochondrial large subunit ribosomal protein (Img2) ShK PF01549.24 ORF78787 - 3.6 8.2 15.1 3.6 8.2 2.1 3.1 3 0 0 3 3 3 0 ShK domain-like ADH_N PF08240.12 ORF77920 - 2e-30 104.9 0.1 5.6e-30 103.4 0.1 1.8 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.6 ORF77920 - 1.5e-12 47.2 0.1 2.9e-12 46.3 0.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-associated ADH_zinc_N PF00107.26 ORF77920 - 4.7e-10 39.5 0.2 4.7e-09 36.3 0.0 2.3 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF77920 - 0.0001 23.3 0.2 0.0009 20.3 0.2 2.4 2 1 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF77920 - 0.0013 18.3 0.0 0.0042 16.6 0.0 1.9 2 1 0 2 2 2 1 Glucose dehydrogenase C-terminus AlaDh_PNT_C PF01262.21 ORF77920 - 0.013 14.8 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain ATPgrasp_N PF18130.1 ORF77920 - 0.13 12.8 0.0 0.73 10.4 0.1 2.0 2 0 0 2 2 2 0 ATP-grasp N-terminal domain Pyr_redox_2 PF07992.14 ORF57081 - 1.2e-76 257.8 0.9 2.1e-76 256.9 0.9 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF57081 - 3.6e-42 143.1 0.2 7.9e-42 142.0 0.2 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF57081 - 1.8e-18 66.9 9.7 2.8e-18 66.2 0.1 3.5 4 1 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 ORF57081 - 9.5e-09 35.1 0.1 6.2e-08 32.4 0.0 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF57081 - 1.3e-07 31.0 5.3 1.6e-06 27.5 5.2 2.5 1 1 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 ORF57081 - 4e-06 26.2 6.0 0.00023 20.4 0.3 3.4 4 1 1 5 5 5 2 FAD binding domain NAD_binding_8 PF13450.6 ORF57081 - 7.3e-06 26.1 3.4 0.0034 17.6 0.5 3.2 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 ORF57081 - 8.9e-06 25.2 11.3 0.00013 21.3 0.9 3.5 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF57081 - 3.6e-05 22.7 2.6 0.0084 14.9 0.1 3.8 3 1 1 4 4 4 1 HI0933-like protein K_oxygenase PF13434.6 ORF57081 - 0.00038 19.7 0.2 0.018 14.2 0.0 2.5 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 ORF57081 - 0.001 18.4 0.5 0.18 11.1 0.0 2.7 3 0 0 3 3 3 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 ORF57081 - 0.0013 18.0 0.3 0.0079 15.5 0.0 2.1 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 ORF57081 - 0.0087 15.3 8.1 0.6 9.3 0.5 3.4 2 1 0 2 2 2 1 FAD binding domain DUF4857 PF16149.5 ORF57081 - 0.025 13.9 0.0 0.043 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4857) 3HCDH_N PF02737.18 ORF57081 - 0.2 11.5 0.0 0.2 11.5 0.0 2.1 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 ORF57081 - 0.28 10.2 0.4 12 4.9 0.0 3.0 2 1 0 3 3 3 0 Lycopene cyclase protein DAO PF01266.24 ORF57081 - 0.29 10.6 6.2 3.2 7.3 0.3 3.4 4 0 0 4 4 4 0 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 ORF57081 - 0.45 10.1 3.7 5.1 6.6 0.0 2.7 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Complex1_49kDa PF00346.19 ORF44129 - 8e-48 162.9 0.0 9.9e-35 119.9 0.1 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 ORF44129 - 2.1e-20 73.5 0.2 6.5e-20 72.0 0.2 1.8 2 0 0 2 2 2 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NiFeSe_Hases PF00374.19 ORF44129 - 1.4e-14 54.0 4.0 1.6e-13 50.4 0.1 3.2 4 0 0 4 4 4 2 Nickel-dependent hydrogenase DNA_alkylation PF08713.11 ORF44129 - 0.072 12.8 0.0 2.1 8.0 0.0 2.2 2 0 0 2 2 2 0 DNA alkylation repair enzyme MatE PF01554.18 ORF41848 - 7.6e-45 152.4 32.3 2.1e-24 86.0 10.0 2.4 3 0 0 3 3 3 2 MatE DDDD PF10161.9 ORF41848 - 2.5 7.9 5.4 26 4.6 0.9 3.5 3 0 0 3 3 3 0 Putative mitochondrial precursor protein Aldedh PF00171.22 ORF35328 - 3.8e-179 596.0 0.1 4.3e-179 595.9 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Peptidase_C69 PF03577.15 ORF34080 - 9.2e-63 212.5 0.0 1.1e-62 212.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase family C69 Ycf70 PF17382.2 ORF29251 - 4 7.9 5.2 7.1 7.1 0.6 2.5 1 1 1 2 2 2 0 Uncharacterized Ycf70-like HEAT_2 PF13646.6 ORF22164 - 3.7e-47 158.6 30.7 4.4e-09 36.6 1.4 7.6 2 2 3 7 7 7 7 HEAT repeats HEAT PF02985.22 ORF22164 - 1.6e-35 118.1 30.2 0.016 15.4 0.0 13.2 14 0 0 14 14 12 12 HEAT repeat HEAT_EZ PF13513.6 ORF22164 - 1.7e-19 69.9 34.2 5.8e-05 23.5 0.2 10.1 7 4 3 10 10 10 5 HEAT-like repeat Cnd1 PF12717.7 ORF22164 - 3.2e-19 69.5 1.5 0.00046 20.3 0.0 7.6 3 2 4 7 7 7 6 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 ORF22164 - 3.6e-12 45.6 2.8 0.015 13.9 0.1 5.3 3 2 0 4 4 4 4 Adaptin N terminal region Cohesin_HEAT PF12765.7 ORF22164 - 5.2e-06 26.7 5.7 0.018 15.3 0.1 4.9 5 0 0 5 5 5 2 HEAT repeat associated with sister chromatid cohesion HEAT_PBS PF03130.16 ORF22164 - 2e-05 24.8 46.7 0.15 12.8 0.0 12.0 12 2 0 12 12 12 1 PBS lyase HEAT-like repeat Vac14_Fab1_bd PF12755.7 ORF22164 - 0.00047 20.7 0.8 18 6.0 0.3 4.7 2 2 4 6 6 6 0 Vacuolar 14 Fab1-binding region Nipped-B_C PF12830.7 ORF22164 - 0.0011 19.0 0.5 0.033 14.2 0.0 3.1 3 1 1 4 4 4 1 Sister chromatid cohesion C-terminus DUF4042 PF13251.6 ORF22164 - 0.0038 17.0 10.8 6.6 6.4 0.0 6.6 3 2 4 7 7 7 1 Domain of unknown function (DUF4042) ERAP1_C PF11838.8 ORF22164 - 0.0068 16.0 1.2 2.1 7.8 0.3 2.7 2 2 0 2 2 2 2 ERAP1-like C-terminal domain CLASP_N PF12348.8 ORF22164 - 0.0085 15.7 0.3 1.4 8.4 0.0 3.9 2 2 0 3 3 3 1 CLASP N terminal V-ATPase_H_C PF11698.8 ORF22164 - 0.049 13.7 0.7 12 6.0 0.2 4.1 4 1 1 5 5 5 0 V-ATPase subunit H Arm PF00514.23 ORF22164 - 0.066 13.3 14.9 44 4.3 0.1 7.9 8 1 1 9 9 9 0 Armadillo/beta-catenin-like repeat IF-2 PF11987.8 ORF19087 - 1.9e-21 76.1 0.2 6.3e-21 74.5 0.2 1.9 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 ORF19087 - 2e-13 50.1 0.2 4.7e-13 48.8 0.2 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 ORF19087 - 2.7e-12 46.9 2.8 3.5e-09 36.9 0.3 2.8 2 0 0 2 2 2 2 Elongation factor Tu domain 2 GTP_EFTU PF00009.27 ORF19087 - 0.0027 17.3 0.3 0.011 15.3 0.0 2.0 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain Fe-ADH PF00465.19 ORF18296 - 2.8e-119 398.2 6.0 3.8e-119 397.8 6.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 ORF18296 - 9.1e-16 58.3 8.5 4.2e-10 39.8 0.1 2.6 3 0 0 3 3 3 2 Iron-containing alcohol dehydrogenase Peripla_BP_6 PF13458.6 ORF18296 - 0.0015 18.3 0.1 0.0032 17.2 0.1 1.6 1 0 0 1 1 1 1 Periplasmic binding protein Catalase PF00199.19 ORF151475 - 2.2e-193 642.6 0.3 2.7e-193 642.3 0.3 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 ORF151475 - 1.8e-21 76.1 0.0 6.6e-21 74.3 0.0 1.9 2 0 0 2 2 2 1 Catalase-related immune-responsive AAA PF00004.29 ORF147679 - 1e-13 51.8 0.0 2.3e-13 50.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF147679 - 1.4e-11 45.1 0.8 1.6e-10 41.6 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 ORF147679 - 1.1e-09 38.7 0.0 3e-09 37.3 0.0 1.8 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 ORF147679 - 0.00091 19.2 0.0 0.54 10.1 0.0 2.4 2 0 0 2 2 2 2 NTPase AAA_lid_10 PF17872.1 ORF147679 - 0.0027 17.8 1.6 0.0056 16.8 1.6 1.4 1 0 0 1 1 1 1 AAA lid domain DUF2075 PF09848.9 ORF147679 - 0.0035 16.7 0.0 0.0068 15.7 0.0 1.5 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_assoc_2 PF16193.5 ORF147679 - 0.0063 16.8 0.9 0.014 15.7 0.9 1.5 1 0 0 1 1 1 1 AAA C-terminal domain AAA_19 PF13245.6 ORF147679 - 0.0067 16.8 0.4 0.045 14.1 0.4 2.2 1 1 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF147679 - 0.068 12.9 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_32 PF13654.6 ORF147679 - 0.09 11.5 0.0 0.16 10.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain EccE PF11203.8 ORF147679 - 1.6 9.1 5.6 21 5.5 2.5 2.9 2 0 0 2 2 2 0 Putative type VII ESX secretion system translocon, EccE SAM_2 PF07647.17 ORF1282 - 1.4e-11 44.3 0.3 3e-11 43.3 0.3 1.5 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_1 PF00536.30 ORF1282 - 1.9e-10 41.0 0.2 3.3e-10 40.3 0.2 1.4 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) PknG_rubred PF16919.5 ORF1282 - 0.15 12.2 0.0 0.15 12.2 0.0 2.8 3 0 0 3 3 3 0 Protein kinase G rubredoxin domain zf-CGNR PF11706.8 ORF1282 - 2.7 7.9 5.1 0.58 10.1 0.9 2.2 2 0 0 2 2 2 0 CGNR zinc finger Metallothio_Pro PF02069.16 ORF1282 - 8.2 6.7 9.5 19 5.5 0.2 2.6 1 1 0 2 2 2 0 Prokaryotic metallothionein p450 PF00067.22 ORF87395 - 8.3e-49 166.6 0.1 1.1e-48 166.1 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Pro_isomerase PF00160.21 ORF80711 - 1.3e-30 106.7 0.0 1.3e-30 106.7 0.0 2.0 2 1 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RRM_1 PF00076.22 ORF80711 - 7.3e-15 54.6 1.6 9.5e-15 54.2 0.1 2.0 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GTP_EFTU PF00009.27 ORF64827 - 0.26 10.8 2.0 0.33 10.5 0.8 1.9 1 1 2 3 3 3 0 Elongation factor Tu GTP binding domain GTP_EFTU PF00009.27 ORF54313 - 0.26 10.8 2.0 0.33 10.5 0.8 1.9 1 1 2 3 3 3 0 Elongation factor Tu GTP binding domain AAA_33 PF13671.6 ORF38539 - 5.1e-10 39.7 0.4 3.9e-09 36.8 0.0 2.5 2 1 0 2 2 2 1 AAA domain LigT_PEase PF02834.16 ORF38539 - 0.00013 22.1 0.0 0.25 11.5 0.0 3.2 4 0 0 4 4 4 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 ORF38539 - 0.00041 20.3 0.1 0.027 14.4 0.0 2.6 3 0 0 3 3 3 1 2'-5' RNA ligase superfamily Rad17 PF03215.15 ORF38539 - 0.00068 19.6 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain Zeta_toxin PF06414.12 ORF38539 - 0.0096 15.2 0.1 0.031 13.5 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin AAA_28 PF13521.6 ORF38539 - 0.052 13.8 0.2 2.2 8.5 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF38539 - 0.054 13.9 0.2 0.18 12.2 0.0 2.0 2 1 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 ORF38539 - 0.091 13.3 0.0 0.21 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF38539 - 0.11 12.9 0.0 0.24 11.8 0.0 1.5 1 0 0 1 1 1 0 RNA helicase RNase_E_G PF10150.9 ORF26058 - 6.5e-102 340.6 0.9 9.2e-102 340.1 0.5 1.4 2 0 0 2 2 2 1 Ribonuclease E/G family S1 PF00575.23 ORF26058 - 2.3e-07 31.0 0.3 1.6e-06 28.4 0.0 2.3 2 0 0 2 2 2 1 S1 RNA binding domain HARE-HTH PF05066.13 ORF26058 - 0.067 13.6 0.0 0.6 10.5 0.0 2.5 2 0 0 2 2 2 0 HB1, ASXL, restriction endonuclease HTH domain GTP_EFTU PF00009.27 ORF148646 - 0.26 10.8 2.0 0.33 10.5 0.8 1.9 1 1 2 3 3 3 0 Elongation factor Tu GTP binding domain GyrB_insert PF18053.1 ORF146253 - 2.8e-56 190.0 0.1 4.9e-56 189.2 0.1 1.4 1 0 0 1 1 1 1 DNA gyrase B subunit insert domain DNA_gyraseB_C PF00986.21 ORF146253 - 2.1e-31 107.9 0.2 6.1e-31 106.4 0.2 1.9 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus DNA_gyraseB PF00204.25 ORF146253 - 6.7e-31 107.1 0.3 1.3e-30 106.1 0.3 1.5 1 0 0 1 1 1 1 DNA gyrase B Toprim PF01751.22 ORF146253 - 3.4e-14 52.9 0.0 1.2e-13 51.2 0.0 1.9 1 0 0 1 1 1 1 Toprim domain Spindle_Spc25 PF08234.12 ORF146253 - 0.058 13.6 0.0 0.19 12.0 0.0 1.9 1 0 0 1 1 1 0 Chromosome segregation protein Spc25 MFS_1 PF07690.16 ORF14315 - 2.5e-15 56.3 20.0 2.5e-15 56.3 20.0 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily PMD PF10536.9 ORF14315 - 0.55 9.3 1.4 0.57 9.2 0.2 1.6 2 0 0 2 2 2 0 Plant mobile domain MatE PF01554.18 ORF132988 - 4.1e-40 137.1 24.9 1.4e-20 73.5 8.8 2.3 2 0 0 2 2 2 2 MatE ABC_membrane PF00664.23 ORF12741 - 1.3e-20 74.2 23.9 2e-20 73.6 23.9 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF12741 - 1.3e-20 74.3 0.0 3.1e-20 73.1 0.0 1.6 2 0 0 2 2 1 1 ABC transporter SMC_N PF02463.19 ORF12741 - 0.0029 17.1 0.8 0.33 10.3 0.5 2.6 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF12741 - 0.0036 17.2 0.5 0.073 12.9 0.1 2.5 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system NB-ARC PF00931.22 ORF12741 - 0.0071 15.6 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain AAA_29 PF13555.6 ORF12741 - 0.0088 15.8 0.1 0.02 14.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF12741 - 0.0092 16.3 0.0 0.019 15.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF12741 - 0.017 15.1 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase RuvB_N PF05496.12 ORF12741 - 0.018 14.8 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain TsaE PF02367.17 ORF12741 - 0.019 15.0 0.0 0.038 14.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_23 PF13476.6 ORF12741 - 0.019 15.4 0.1 0.041 14.4 0.1 1.7 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 ORF12741 - 0.02 14.0 0.1 0.043 12.9 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein cobW PF02492.19 ORF12741 - 0.021 14.4 0.0 0.036 13.6 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 ORF12741 - 0.038 13.9 0.0 0.072 13.0 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA PF00004.29 ORF12741 - 0.038 14.4 0.0 0.089 13.2 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 ORF12741 - 0.041 14.4 0.0 0.082 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF12741 - 0.056 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_19 PF13245.6 ORF12741 - 0.077 13.3 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 ORF12741 - 0.1 12.4 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 ORF12741 - 0.15 11.9 0.1 0.33 10.8 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.6 ORF12741 - 0.17 12.3 0.0 0.28 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain FUSC-like PF12805.7 ORF12741 - 1.1 8.2 6.6 2.2 7.3 6.6 1.5 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Tetraspanin PF00335.20 ORF12741 - 1.6 8.4 16.8 1.3 8.6 10.8 2.5 1 1 1 2 2 2 0 Tetraspanin family DUF2070 PF09843.9 ORF12741 - 4.5 5.4 14.4 7.3 4.7 14.4 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3935 PF13071.6 ORF12047 - 0.11 13.1 0.1 0.23 12.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3935) TPR_7 PF13176.6 ORF117111 - 0.00016 21.4 0.2 0.089 12.9 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF117111 - 0.0016 18.5 0.9 0.061 13.6 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat Clathrin PF00637.20 ORF117111 - 0.013 15.4 2.1 0.068 13.0 0.1 3.1 4 0 0 4 4 4 0 Region in Clathrin and VPS TPR_2 PF07719.17 ORF117111 - 0.069 13.3 0.1 17 5.8 0.0 4.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF117111 - 0.095 13.4 0.2 19 6.2 0.0 4.6 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF117111 - 1.6 8.7 4.4 7.8 6.5 0.0 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat GTP_EFTU PF00009.27 ORF1169 - 0.26 10.8 2.0 0.33 10.5 0.8 1.9 1 1 2 3 3 3 0 Elongation factor Tu GTP binding domain NHL PF01436.21 ORF106956 - 2.4e-24 84.1 8.2 1.4e-07 31.2 0.0 5.7 5 1 0 5 5 5 4 NHL repeat SGL PF08450.12 ORF106956 - 7.8e-05 22.4 0.0 0.012 15.2 0.0 2.7 2 1 1 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region DUF5128 PF17170.4 ORF106956 - 0.016 14.4 0.0 27 3.7 0.0 3.7 3 1 0 4 4 4 0 6-bladed beta-propeller DUF3598 PF12204.8 ORF106956 - 0.18 11.2 0.1 0.32 10.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3598) PKcGMP_CC PF16808.5 ORF75633 - 0.15 11.9 0.6 0.37 10.7 0.6 1.7 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase YkyA PF10368.9 ORF7125 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF7125 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF7125 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor ATP-gua_Ptrans PF00217.19 ORF67721 - 1.6e-25 89.9 0.2 3.7e-25 88.7 0.2 1.6 1 1 0 1 1 1 1 ATP:guanido phosphotransferase, C-terminal catalytic domain ATP-gua_PtransN PF02807.15 ORF67721 - 1.4e-19 70.2 0.0 2.8e-19 69.3 0.0 1.5 1 0 0 1 1 1 1 ATP:guanido phosphotransferase, N-terminal domain RNR_Alpha PF17975.1 ORF67721 - 0.12 12.9 1.4 0.24 11.9 0.2 2.1 2 0 0 2 2 2 0 Ribonucleotide reductase alpha domain YkyA PF10368.9 ORF6166 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF6166 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF6166 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Kinesin PF00225.23 ORF45480 - 1.6e-63 214.6 0.1 1.6e-63 214.6 0.1 1.5 2 0 0 2 2 2 1 Kinesin motor domain DUF1043 PF06295.12 ORF45480 - 0.093 12.7 3.0 0.1 12.6 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1043) NPV_P10 PF05531.12 ORF45480 - 0.63 10.6 3.6 13 6.3 0.0 3.3 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.12 ORF45480 - 3 7.9 6.1 1.2 9.2 0.5 3.0 4 0 0 4 4 4 0 Protein of unknown function (DUF1664) YkyA PF10368.9 ORF38108 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF38108 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF38108 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor CAP PF00188.26 ORF32610 - 0.051 14.4 2.7 0.16 12.8 0.0 2.7 2 1 0 2 2 2 0 Cysteine-rich secretory protein family EF-hand_1 PF00036.32 ORF24761 - 0.001 18.5 0.1 0.0098 15.4 0.0 2.6 2 1 1 3 3 3 1 EF hand EF-hand_7 PF13499.6 ORF24761 - 0.0011 19.4 0.0 0.0098 16.3 0.0 2.4 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF24761 - 0.012 15.4 0.1 0.5 10.4 0.0 3.0 2 1 1 3 3 3 0 EF-hand domain EF-hand_8 PF13833.6 ORF24761 - 0.013 15.3 0.0 0.042 13.7 0.0 1.9 2 0 0 2 2 2 0 EF-hand domain pair HisKA_2 PF07568.12 ORF24761 - 0.018 15.1 0.1 0.035 14.2 0.1 1.4 1 0 0 1 1 1 0 Histidine kinase EF-hand_4 PF12763.7 ORF24761 - 0.064 13.2 0.2 0.63 10.0 0.2 2.2 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_5 PF13202.6 ORF24761 - 0.065 12.7 0.4 0.54 9.8 0.0 2.6 3 0 0 3 3 3 0 EF hand YkyA PF10368.9 ORF24481 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF24481 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF24481 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Pkinase PF00069.25 ORF165 - 2e-79 266.7 0.1 2.7e-79 266.3 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF165 - 9.1e-42 143.1 0.0 1.3e-41 142.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase POLO_box PF00659.18 ORF165 - 9.8e-13 48.1 1.3 2.2e-12 47.0 0.4 2.1 2 0 0 2 2 2 1 POLO box duplicated region Kinase-like PF14531.6 ORF165 - 6.3e-09 35.5 0.0 3e-07 30.0 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF165 - 4.3e-06 25.8 0.0 7.4e-06 25.0 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kinase-PolyVal PF18762.1 ORF165 - 0.007 16.3 0.3 0.016 15.1 0.3 1.7 1 0 0 1 1 1 1 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins Haspin_kinase PF12330.8 ORF165 - 0.015 14.3 0.2 0.026 13.5 0.2 1.4 1 0 0 1 1 1 0 Haspin like kinase domain Inos-1-P_synth PF01658.17 ORF165 - 0.083 13.1 0.4 0.28 11.4 0.2 2.0 2 0 0 2 2 2 0 Myo-inositol-1-phosphate synthase APH PF01636.23 ORF165 - 0.13 12.2 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family YkyA PF10368.9 ORF136161 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF136161 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF136161 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Aa_trans PF01490.18 ORF133553 - 2e-42 145.3 36.5 2.6e-42 145.0 36.5 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein PsbQ PF05757.11 ORF133553 - 0.28 10.9 0.1 0.45 10.2 0.1 1.2 1 0 0 1 1 1 0 Oxygen evolving enhancer protein 3 (PsbQ) Pkinase PF00069.25 ORF129467 - 1.6e-50 172.0 0.0 2e-50 171.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF129467 - 2.2e-33 115.6 0.0 3.3e-33 115.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF129467 - 7e-06 25.6 0.0 1.4e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF129467 - 0.02 14.8 0.3 0.53 10.2 0.0 2.4 2 0 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF129467 - 0.029 13.1 0.0 0.042 12.6 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase FAD_binding_3 PF01494.19 ORF117085 - 2.3e-14 53.4 0.1 3.2e-14 53.0 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF117085 - 0.0089 15.1 0.0 0.034 13.2 0.0 1.8 2 0 0 2 2 2 1 Squalene epoxidase FAD_binding_3 PF01494.19 ORF117076 - 2.3e-14 53.4 0.1 3.2e-14 53.0 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF117076 - 0.0088 15.1 0.0 0.034 13.2 0.0 1.8 2 0 0 2 2 2 1 Squalene epoxidase Aa_trans PF01490.18 ORF9895 - 4.5e-37 127.7 33.7 5.4e-37 127.5 33.7 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF9895 - 1.3e-08 34.3 21.9 2.8e-08 33.2 21.9 1.6 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF423 PF04241.15 ORF9895 - 8.1 6.7 10.7 2.8 8.2 0.1 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF423) SlyX PF04102.12 ORF8698 - 0.0064 17.1 0.8 0.0064 17.1 0.8 5.4 3 1 3 6 6 6 1 SlyX DivIC PF04977.15 ORF8698 - 0.014 15.2 1.0 0.014 15.2 1.0 6.2 2 2 6 8 8 8 0 Septum formation initiator GAS2 PF02187.17 ORF8698 - 0.02 14.9 0.0 0.052 13.6 0.0 1.7 1 0 0 1 1 1 0 Growth-Arrest-Specific Protein 2 Domain bZIP_1 PF00170.21 ORF8698 - 0.097 12.8 0.3 0.097 12.8 0.3 5.9 4 3 0 4 4 4 0 bZIP transcription factor NYD-SP28_assoc PF14775.6 ORF8698 - 0.39 10.8 5.0 22 5.3 1.2 3.3 2 0 0 2 2 2 0 Sperm tail C-terminal domain ATPase PF06745.13 ORF8698 - 0.64 9.3 11.8 0.11 11.9 5.9 2.4 1 1 1 2 2 2 0 KaiC PKcGMP_CC PF16808.5 ORF8698 - 1.4 8.9 0.0 0.41 10.5 0.5 5.6 6 1 2 8 8 8 0 Coiled-coil N-terminus of cGMP-dependent protein kinase YkyA PF10368.9 ORF61157 - 0.12 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF61157 - 0.22 11.4 2.0 1.5 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF61157 - 0.23 11.8 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Sugar_tr PF00083.24 ORF54237 - 9.9e-133 443.3 31.7 1.1e-132 443.1 31.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF54237 - 6.1e-40 137.2 55.3 2.9e-36 125.1 33.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 ORF54237 - 1.4e-09 37.0 6.2 1.4e-09 37.0 6.2 1.8 2 1 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 ORF54237 - 0.0028 16.3 16.9 0.0028 16.3 16.9 3.7 2 1 2 4 4 4 1 MFS/sugar transport protein Pkinase PF00069.25 ORF46153 - 6.7e-71 238.7 0.7 1.1e-70 238.1 0.1 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46153 - 2e-32 112.5 0.0 3e-32 111.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Myosin_TH1 PF06017.13 ORF46153 - 5.1e-05 23.0 4.3 0.00011 22.0 4.3 1.6 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding Kinase-like PF14531.6 ORF46153 - 0.00013 21.4 0.0 0.00035 20.0 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF46153 - 0.0023 17.0 0.1 0.0023 17.0 0.1 1.8 2 0 0 2 2 2 1 Haspin like kinase domain RIO1 PF01163.22 ORF46153 - 0.023 14.3 0.1 0.12 12.0 0.0 2.1 2 0 0 2 2 2 0 RIO1 family ENTH PF01417.20 ORF46153 - 0.063 13.3 0.2 1.3 9.1 0.0 2.4 2 0 0 2 2 2 0 ENTH domain APH PF01636.23 ORF46153 - 0.066 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family PARP PF00644.20 ORF22679 - 2.2e-17 63.3 0.0 5.5e-16 58.7 0.0 2.2 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Glyco_hydro_15 PF00723.21 ORF151098 - 2.2e-31 109.1 0.2 8.7e-31 107.2 0.2 1.9 1 1 0 1 1 1 1 Glycosyl hydrolases family 15 Trefoil PF00088.18 ORF151098 - 1.3e-09 37.8 8.3 2.3e-09 37.0 8.3 1.4 1 0 0 1 1 1 1 Trefoil (P-type) domain PH_14 PF17787.1 ORF151098 - 0.019 14.8 0.0 0.057 13.3 0.0 1.7 2 0 0 2 2 2 0 PH domain ubiquitin PF00240.23 ORF142934 - 3.6e-21 74.7 0.0 7.8e-17 60.8 0.0 2.6 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF142934 - 5.4e-08 32.5 0.0 2.2e-06 27.4 0.0 2.6 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like VWA_3 PF13768.6 ORF142934 - 0.0002 21.4 0.0 0.00031 20.7 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF142934 - 0.0045 17.3 0.9 0.032 14.5 0.0 2.5 3 0 0 3 3 3 1 von Willebrand factor type A domain WD40 PF00400.32 ORF141869 - 4.3e-68 223.6 22.8 1.5e-09 38.3 0.4 8.2 8 0 0 8 8 8 8 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF141869 - 4.9e-21 74.8 1.5 0.0016 18.7 0.0 6.7 1 1 6 7 7 7 6 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF141869 - 6.4e-12 45.4 3.8 0.016 14.5 0.0 5.4 4 3 1 5 5 5 4 WD40-like domain Nup160 PF11715.8 ORF141869 - 5e-10 38.6 12.4 0.31 9.6 0.0 6.7 1 1 6 7 7 7 5 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 ORF141869 - 4e-07 29.3 8.6 0.28 10.1 0.7 5.3 1 1 4 5 5 5 3 WD40 region of Ge1, enhancer of mRNA-decapping protein CEP19 PF14933.6 ORF141869 - 0.0024 18.2 0.1 0.0024 18.2 0.1 1.5 2 0 0 2 2 2 1 CEP19-like protein WD40_3 PF15911.5 ORF141869 - 0.11 12.6 0.8 6.9 6.8 0.0 3.4 4 0 0 4 4 4 0 WD domain, G-beta repeat 3A PF00803.18 ORF141869 - 0.15 11.4 0.2 27 3.9 0.0 3.1 2 1 1 3 3 3 0 3A/RNA2 movement protein family Kelch_3 PF13415.6 ORF137633 - 3.6e-11 43.0 4.9 0.013 15.8 0.0 5.5 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF137633 - 3.1e-09 36.7 1.4 0.0015 18.5 0.0 4.0 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF137633 - 1.3e-07 31.6 0.4 0.00041 20.5 0.0 4.8 3 1 2 5 5 5 1 Kelch motif Kelch_2 PF07646.15 ORF137633 - 4.6e-07 29.6 1.1 0.14 12.2 0.0 4.4 5 0 0 5 5 5 2 Kelch motif Kelch_5 PF13854.6 ORF137633 - 1.8e-06 27.8 0.1 0.011 15.7 0.0 3.9 5 0 0 5 5 5 2 Kelch motif Kelch_1 PF01344.25 ORF137633 - 2.2e-06 27.1 0.5 0.00021 20.8 0.0 3.7 5 0 0 5 5 5 1 Kelch motif HD PF01966.22 ORF130568 - 1e-12 48.4 0.0 1.9e-12 47.5 0.0 1.5 1 0 0 1 1 1 1 HD domain PDEase_I PF00233.19 ORF130568 - 0.03 14.1 0.1 0.058 13.1 0.1 1.5 1 0 0 1 1 1 0 3'5'-cyclic nucleotide phosphodiesterase SIX1_SD PF16878.5 ORF130568 - 0.034 14.7 0.1 0.075 13.6 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator, SIX1, N-terminal SD domain HD_6 PF18019.1 ORF130568 - 0.18 11.9 0.1 0.32 11.1 0.1 1.3 1 0 0 1 1 1 0 HD domain Na_sulph_symp PF00939.19 ORF123504 - 2e-186 620.6 38.9 2.3e-186 620.5 38.9 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 ORF123504 - 4.5e-18 65.5 37.8 4.5e-18 65.5 37.8 2.3 1 1 1 2 2 2 1 Citrate transporter LRR_6 PF13516.6 ORF120343 - 3.1e-15 54.9 29.2 0.016 15.2 0.1 11.9 12 0 0 12 12 12 6 Leucine Rich repeat FNIP PF05725.12 ORF120343 - 0.008 16.3 1.8 89 3.4 0.0 6.2 8 0 0 8 8 8 1 FNIP Repeat Aa_trans PF01490.18 ORF117025 - 1.9e-37 129.0 33.6 2.4e-37 128.6 33.6 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF117025 - 1.3e-08 34.3 21.9 2.8e-08 33.2 21.9 1.6 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF423 PF04241.15 ORF117025 - 7.6 6.8 10.8 2.8 8.2 0.1 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF423) Octopine_DH PF02317.17 ORF76213 - 5.8e-36 123.8 0.0 8.9e-36 123.2 0.0 1.3 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain ApbA PF02558.16 ORF76213 - 0.00093 18.9 0.0 0.0016 18.1 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA WD40 PF00400.32 ORF70338 - 7.1e-26 90.0 20.3 0.0002 22.1 0.1 7.2 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF70338 - 7.6e-06 26.1 4.7 0.014 15.7 0.0 4.9 5 1 1 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF70338 - 0.0027 17.6 1.4 0.21 11.6 0.1 3.2 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Ricin_B_lectin PF00652.22 ORF70338 - 0.063 13.5 3.7 0.056 13.7 1.4 2.2 2 1 0 2 2 2 0 Ricin-type beta-trefoil lectin domain DUF1035 PF06281.12 ORF6846 - 0.097 12.7 0.0 0.3 11.1 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1035) NIF PF03031.18 ORF48907 - 2e-46 157.6 0.5 5.9e-46 156.1 0.5 1.9 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF5525 PF17663.1 ORF24339 - 0.56 8.2 4.0 0.78 7.7 4.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5525) zf-RING_2 PF13639.6 ORF152053 - 2.9e-07 30.7 6.1 2.9e-07 30.7 6.1 8.8 8 3 1 9 9 9 2 Ring finger domain zf-RING_11 PF17123.5 ORF152053 - 0.00073 19.2 1.3 0.00073 19.2 1.3 6.6 8 0 0 8 8 8 2 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF152053 - 0.00092 19.0 1.7 0.00092 19.0 1.7 8.6 9 1 1 10 10 10 2 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF152053 - 0.0084 16.4 3.5 0.0084 16.4 3.5 7.2 7 3 2 9 9 9 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF152053 - 0.025 14.5 6.3 0.025 14.5 6.3 9.6 4 3 4 8 8 8 0 zinc-RING finger domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks22.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks22.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks22.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks22.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:05:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Spore_permease PF03845.13 NODE_51838_length_348_cov_1.597444_g43923_i0reverse_frame_2 - 0.098 11.5 1.1 0.11 11.3 1.1 1.1 1 0 0 1 1 1 0 Spore germination protein DUF4304 PF14137.6 NODE_51837_length_348_cov_1.623003_g43922_i0reverse_frame_3 - 0.011 15.8 0.4 0.021 15.0 0.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4304) Sec7 PF01369.20 NODE_51835_length_348_cov_1.699681_g43920_i0reverse_frame_3 - 0.025 14.3 0.1 0.028 14.1 0.1 1.1 1 0 0 1 1 1 0 Sec7 domain UCH PF00443.29 NODE_51835_length_348_cov_1.699681_g43920_i0reverse_frame_2 - 0.00064 19.3 0.0 0.00072 19.1 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Zn-ribbon_8 PF09723.10 NODE_51835_length_348_cov_1.699681_g43920_i0reverse_frame_2 - 0.04 14.1 0.7 0.089 12.9 0.7 1.6 1 0 0 1 1 1 0 Zinc ribbon domain Skp1_POZ PF03931.15 NODE_51823_length_348_cov_2.150160_g43908_i0reverse_frame_3 - 0.0032 17.6 1.5 0.0058 16.8 0.1 2.0 2 1 0 2 2 2 1 Skp1 family, tetramerisation domain FlaC_arch PF05377.11 NODE_51819_length_348_cov_2.319489_g43904_i0forward_frame_3 - 0.034 14.5 4.3 3.4 8.2 1.2 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) zf-C4pol PF14260.6 NODE_51819_length_348_cov_2.319489_g43904_i0forward_frame_3 - 0.33 11.4 4.5 1 9.9 4.5 1.9 1 1 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta Hid1 PF12722.7 NODE_51817_length_348_cov_2.335463_g43902_i0forward_frame_2 - 1.8 6.6 4.0 1.9 6.5 4.0 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein TraF PF13728.6 NODE_51808_length_348_cov_2.955272_g43893_i0reverse_frame_2 - 0.01 15.7 0.0 0.013 15.4 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein 7TM_GPCR_Srsx PF10320.9 NODE_51808_length_348_cov_2.955272_g43893_i0forward_frame_3 - 0.19 11.1 1.5 0.24 10.7 1.5 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srsx Surfac_D-trimer PF09006.11 NODE_51807_length_348_cov_2.974441_g43892_i0reverse_frame_2 - 0.27 11.2 3.1 4.7 7.2 1.0 2.3 2 0 0 2 2 2 0 Lung surfactant protein D coiled-coil trimerisation Peptidase_S15 PF02129.18 NODE_51807_length_348_cov_2.974441_g43892_i0forward_frame_3 - 0.16 11.5 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) RICH PF05062.12 NODE_51806_length_348_cov_3.089457_g43891_i0reverse_frame_3 - 0.07 13.5 0.5 0.14 12.6 0.5 1.5 1 0 0 1 1 1 0 RICH domain Cas9_PI2 PF18070.1 NODE_51803_length_348_cov_3.396166_g43888_i0forward_frame_3 - 0.062 14.0 0.2 0.11 13.2 0.2 1.4 1 0 0 1 1 1 0 CRISPR-Cas9 PI domain Amidohydro_2 PF04909.14 NODE_51801_length_348_cov_3.888179_g43886_i0forward_frame_3 - 0.072 12.9 0.0 0.081 12.7 0.0 1.1 1 0 0 1 1 1 0 Amidohydrolase DUF1688 PF07958.11 NODE_51799_length_348_cov_3.945687_g43884_i0reverse_frame_2 - 0.071 11.8 0.0 0.08 11.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1688) Antistasin PF02822.14 NODE_51797_length_348_cov_4.424920_g43882_i0reverse_frame_3 - 0.093 13.4 2.4 0.093 13.4 2.4 2.4 2 0 0 2 2 2 0 Antistasin family EGF_3 PF12947.7 NODE_51797_length_348_cov_4.424920_g43882_i0reverse_frame_3 - 9.1 6.6 12.0 0.94 9.7 5.6 2.6 1 1 0 2 2 2 0 EGF domain Rib_hydrolayse PF02267.17 NODE_51797_length_348_cov_4.424920_g43882_i0forward_frame_2 - 0.046 13.1 1.1 0.055 12.9 1.1 1.0 1 0 0 1 1 1 0 ADP-ribosyl cyclase Goodbye PF17109.5 NODE_51794_length_348_cov_45.348243_g43879_i0reverse_frame_2 - 0.046 14.2 0.0 0.056 13.9 0.0 1.2 1 0 0 1 1 1 0 fungal STAND N-terminal Goodbye domain DUF4193 PF13834.6 NODE_51794_length_348_cov_45.348243_g43879_i0forward_frame_3 - 0.18 12.3 0.0 0.26 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4193) NTP_transf_2 PF01909.23 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 1.7e-06 28.3 0.1 3.7e-06 27.1 0.1 1.8 1 1 1 2 2 2 1 Nucleotidyltransferase domain Polbeta PF18765.1 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 5.8e-05 23.1 1.4 0.00011 22.2 0.2 1.9 1 1 1 2 2 2 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 0.013 15.7 0.5 0.015 15.5 0.1 1.4 2 0 0 2 2 2 0 DNA polymerase beta palm DUF4269 PF14091.6 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 0.016 15.5 0.2 0.018 15.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) DUF1359 PF07097.11 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 0.02 15.1 0.5 0.025 14.8 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1359) Abhydrolase_8 PF06259.12 NODE_51788_length_348_cov_69.610224_g43874_i0reverse_frame_3 - 0.052 13.2 0.0 0.061 12.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase D5_N PF08706.11 NODE_51784_length_348_cov_78.102236_g43870_i0forward_frame_3 - 0.0019 18.5 0.4 0.002 18.4 0.4 1.2 1 0 0 1 1 1 1 D5 N terminal like DUF4312 PF14189.6 NODE_51781_length_348_cov_84.230032_g43867_i0reverse_frame_3 - 1 9.4 2.4 1.7 8.7 2.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) BT1 PF03092.16 NODE_51780_length_348_cov_84.476038_g43866_i0reverse_frame_3 - 4.9e-05 21.7 0.0 6.1e-05 21.4 0.0 1.0 1 0 0 1 1 1 1 BT1 family Htr2 PF17909.1 NODE_51779_length_348_cov_89.591054_g43865_i0reverse_frame_2 - 0.16 12.2 0.4 0.27 11.5 0.3 1.4 1 1 0 1 1 1 0 Htr2 transmembrane domain Sel1 PF08238.12 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 5.8e-07 30.0 0.1 1.9e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 Sel1 repeat TPR_19 PF14559.6 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 0.018 15.5 2.0 0.059 13.9 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 0.038 14.6 1.6 0.038 14.6 1.6 2.6 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 0.062 14.0 0.8 2.1 9.2 0.0 3.0 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_3 - 0.15 12.9 7.6 4.2 8.5 0.7 3.2 2 1 1 3 3 3 0 Tetratricopeptide repeat START PF01852.19 NODE_51779_length_348_cov_89.591054_g43865_i0forward_frame_2 - 0.021 14.3 0.1 0.028 13.8 0.1 1.2 1 0 0 1 1 1 0 START domain DUF5426 PF17473.2 NODE_51778_length_348_cov_92.718850_g43864_i0forward_frame_3 - 0.068 13.4 1.7 0.082 13.2 1.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5426) DUF2655 PF10848.8 NODE_51777_length_348_cov_93.028754_g43863_i0reverse_frame_2 - 0.022 15.1 0.7 0.033 14.5 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2655) Peptidase_A22B PF04258.13 NODE_51776_length_348_cov_94.792332_g43862_i0reverse_frame_2 - 0.11 12.0 12.9 0.12 11.9 12.9 1.0 1 0 0 1 1 1 0 Signal peptide peptidase PhyH PF05721.13 NODE_51776_length_348_cov_94.792332_g43862_i0forward_frame_3 - 3.8e-10 40.4 0.0 4.9e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) 2OG-FeII_Oxy_5 PF13759.6 NODE_51776_length_348_cov_94.792332_g43862_i0forward_frame_3 - 0.0061 16.9 0.0 0.0099 16.3 0.0 1.4 1 0 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase Spc7_N PF15402.6 NODE_51772_length_348_cov_117.610224_g43858_i0reverse_frame_2 - 0.06 11.6 0.1 0.071 11.4 0.1 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 PDR_CDR PF06422.12 NODE_51772_length_348_cov_117.610224_g43858_i0forward_frame_2 - 8.6 6.3 9.9 0.55 10.2 2.2 2.4 1 1 1 2 2 2 0 CDR ABC transporter NAP PF00956.18 NODE_51767_length_348_cov_169.747604_g43853_i0forward_frame_3 - 3e-09 36.5 1.2 3e-09 36.5 1.2 1.9 1 1 1 2 2 2 1 Nucleosome assembly protein (NAP) DUF3402 PF11882.8 NODE_51767_length_348_cov_169.747604_g43853_i0forward_frame_3 - 0.017 14.3 0.0 0.018 14.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3402) Ribosomal_L41 PF05162.13 NODE_51765_length_348_cov_199.846645_g43851_i0reverse_frame_2 - 4.1e-06 26.7 25.3 4.1e-06 26.7 25.3 3.2 5 1 0 5 5 5 1 Ribosomal protein L41 GON PF08685.11 NODE_51765_length_348_cov_199.846645_g43851_i0reverse_frame_2 - 0.0097 15.8 1.2 0.013 15.4 1.2 1.1 1 0 0 1 1 1 1 GON domain DUF2733 PF10813.8 NODE_51760_length_348_cov_318.619808_g43846_i0reverse_frame_2 - 0.23 11.3 0.3 0.23 11.3 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) HAP2-GCS1 PF10699.9 NODE_51760_length_348_cov_318.619808_g43846_i0forward_frame_3 - 0.015 15.3 0.8 0.015 15.3 0.8 2.3 2 2 0 2 2 2 0 Male gamete fusion factor DUF3116 PF11313.8 NODE_51759_length_348_cov_353.111821_g43845_i0reverse_frame_3 - 0.12 12.2 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) Arena_glycoprot PF00798.18 NODE_51759_length_348_cov_353.111821_g43845_i0reverse_frame_2 - 0.081 11.6 4.9 0.076 11.7 4.9 1.1 1 0 0 1 1 1 0 Arenavirus glycoprotein CytochromB561_N PF09786.9 NODE_51759_length_348_cov_353.111821_g43845_i0reverse_frame_2 - 5.7 5.8 4.8 6.2 5.7 4.8 1.1 1 0 0 1 1 1 0 Cytochrome B561, N terminal zf_CopZ PF18423.1 ORF99724 - 0.072 13.1 0.1 0.15 12.1 0.1 1.7 1 1 0 1 1 1 0 Zinc binding domain HMG_box PF00505.19 ORF99512 - 0.0042 17.5 2.2 0.0066 16.8 1.2 1.9 2 1 0 2 2 2 1 HMG (high mobility group) box GATase_4 PF13230.6 ORF99168 - 1.2e-34 119.4 0.0 1.4e-34 119.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Prok-E2_C PF14459.6 ORF99000 - 0.1 12.8 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family C DUF3629 PF12302.8 ORF97461 - 0.048 13.1 0.5 0.06 12.8 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3629) BAP PF06639.11 ORF97461 - 0.15 12.4 0.4 0.25 11.7 0.2 1.5 1 1 0 1 1 1 0 Basal layer antifungal peptide (BAP) ABC_tran PF00005.27 ORF96359 - 4e-09 37.1 0.1 7.3e-09 36.3 0.0 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF96359 - 0.00016 21.2 0.3 0.00018 21.0 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain MFS_Mycoplasma PF07672.13 ORF95697 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF95697 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF95697 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF95697 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF95697 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF95697 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF95697 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF95697 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) UCH_N PF16674.5 ORF95190 - 0.0077 16.1 1.6 0.0099 15.8 1.6 1.1 1 0 0 1 1 1 1 N-terminal of ubiquitin carboxyl-terminal hydrolase 37 VP7 PF00434.18 ORF94509 - 0.0023 17.1 0.3 0.0028 16.9 0.3 1.2 1 0 0 1 1 1 1 Glycoprotein VP7 DUF1161 PF06649.12 ORF94070 - 6.1e-22 77.6 0.0 7.9e-22 77.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1161) Retro_M PF02813.14 ORF94070 - 0.043 14.2 0.1 0.057 13.8 0.1 1.2 1 0 0 1 1 1 0 Retroviral M domain Glyco_transf_18 PF15024.6 ORF94048 - 0.047 12.3 0.6 0.053 12.1 0.6 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Amb_V_allergen PF03913.13 ORF94048 - 0.095 12.7 1.1 0.095 12.7 1.1 2.7 3 0 0 3 3 3 0 Amb V Allergen Foamy_BEL PF03274.14 ORF9348 - 0.0036 16.7 2.0 0.0044 16.4 2.0 1.2 1 0 0 1 1 1 1 Foamy virus BEL 1/2 protein FYVE PF01363.21 ORF92676 - 3.3 7.9 18.6 8.2 6.7 18.6 1.8 1 1 0 1 1 1 0 FYVE zinc finger DUF1029 PF06269.12 ORF92676 - 4.7 7.4 10.2 0.8 9.9 6.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1029) Amnionless PF14828.6 ORF92286 - 0.3 9.9 4.1 0.42 9.4 4.1 1.1 1 0 0 1 1 1 0 Amnionless Myosin_TH1 PF06017.13 ORF92057 - 0.00038 20.2 0.4 0.00038 20.2 0.4 1.1 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding bPH_3 PF14470.6 ORF92057 - 0.065 13.6 1.2 0.1 13.0 1.2 1.3 1 1 0 1 1 1 0 Bacterial PH domain DHHC PF01529.20 ORF91087 - 0.00044 20.4 2.1 0.00044 20.4 2.1 2.5 2 1 0 2 2 2 1 DHHC palmitoyltransferase V-ATPase_H_N PF03224.14 ORF91087 - 0.0034 16.7 0.8 0.004 16.5 0.8 1.0 1 0 0 1 1 1 1 V-ATPase subunit H Penaeidin PF05927.11 ORF91087 - 0.0077 17.0 0.2 0.011 16.5 0.2 1.3 1 0 0 1 1 1 1 Penaeidin DUF3600 PF12207.8 ORF89439 - 0.038 13.9 2.6 0.045 13.7 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3600) ArAE_1_C PF11728.8 ORF88405 - 0.013 15.5 1.2 0.019 15.0 0.9 1.5 1 1 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain DUF1359 PF07097.11 ORF88405 - 0.035 14.4 2.5 0.46 10.8 2.5 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1359) DUF1043 PF06295.12 ORF88405 - 0.04 13.9 0.1 0.043 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) RPA_interact_M PF14767.6 ORF88405 - 2.1 9.0 6.4 8.5 7.0 6.4 2.0 1 1 0 1 1 1 0 Replication protein A interacting middle LMSTEN PF07988.12 ORF87608 - 0.067 12.7 0.1 0.18 11.3 0.1 1.7 1 0 0 1 1 1 0 LMSTEN motif FKBP_C PF00254.28 ORF87238 - 4.4e-09 36.6 0.0 8.3e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Fz PF01392.22 ORF87170 - 0.99 10.0 9.4 6.7 7.4 0.2 2.2 1 1 1 2 2 2 0 Fz domain GyrI-like PF06445.15 ORF8669 - 3.3e-08 34.0 0.1 3.9e-08 33.8 0.1 1.1 1 0 0 1 1 1 1 GyrI-like small molecule binding domain Cass2 PF14526.6 ORF8669 - 3.1e-05 24.2 0.1 3.2e-05 24.1 0.1 1.1 1 0 0 1 1 1 1 Integron-associated effector binding protein DUF1598 PF07643.11 ORF86680 - 0.1 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1598) UPF0731 PF14982.6 ORF86328 - 1.2 9.4 8.3 0.76 10.0 0.6 2.2 1 1 1 2 2 2 0 UPF0731 family Rota_NSP4 PF01452.16 ORF85865 - 0.0049 16.6 1.2 0.0051 16.5 1.2 1.2 1 0 0 1 1 1 1 Rotavirus non structural protein UPF0114 PF03350.16 ORF85865 - 0.058 13.6 4.0 0.14 12.4 4.0 1.7 1 1 0 1 1 1 0 Uncharacterized protein family, UPF0114 DUF4804 PF16062.5 ORF85865 - 0.11 11.3 0.1 0.13 11.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4804) CDC14 PF08045.11 ORF85865 - 0.16 11.1 3.1 0.17 10.9 3.1 1.1 1 0 0 1 1 1 0 Cell division control protein 14, SIN component TMEM215 PF15746.5 ORF85459 - 0.016 14.7 0.1 0.018 14.5 0.1 1.1 1 0 0 1 1 1 0 TMEM215 family RecR PF02132.15 ORF83578 - 0.11 12.0 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 RecR protein PQQ_3 PF13570.6 ORF82450 - 0.11 13.0 0.1 3.2 8.4 0.0 2.1 2 0 0 2 2 2 0 PQQ-like domain Prismane PF03063.20 ORF80155 - 0.11 11.1 0.1 0.13 10.9 0.1 1.0 1 0 0 1 1 1 0 Prismane/CO dehydrogenase family Archaeal_AmoA PF12942.7 ORF79280 - 0.027 14.2 0.6 0.3 10.8 0.2 2.1 2 0 0 2 2 2 0 Archaeal ammonia monooxygenase subunit A (AmoA) zf-UBP PF02148.19 ORF79073 - 3 8.2 6.5 0.29 11.5 0.9 2.2 2 1 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein UPF0220 PF05255.11 ORF79059 - 0.031 13.8 1.4 0.032 13.8 1.4 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) DUF1289 PF06945.13 ORF79045 - 0.024 14.5 0.9 0.043 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) Spore_II_R PF09551.10 ORF77857 - 0.051 14.0 1.9 0.066 13.7 1.9 1.3 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) Pap_E4 PF02711.14 ORF7594 - 0.14 13.1 7.1 0.19 12.7 7.1 1.2 1 0 0 1 1 1 0 E4 protein FSA_C PF10479.9 ORF7594 - 0.34 9.0 9.7 0.38 8.8 9.7 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Med3 PF11593.8 ORF7594 - 0.73 9.0 8.4 0.77 8.9 8.4 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal SPRY PF00622.28 ORF75769 - 0.015 15.5 0.0 0.019 15.1 0.0 1.2 1 0 0 1 1 1 0 SPRY domain DUF3600 PF12207.8 ORF7522 - 0.038 13.9 2.6 0.045 13.7 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3600) MFMR_assoc PF16596.5 ORF74688 - 0.0088 16.5 3.4 0.012 16.1 3.4 1.1 1 0 0 1 1 1 1 Disordered region downstream of MFMR DUF4880 PF16220.5 ORF73837 - 0.042 13.7 3.1 0.12 12.3 3.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4880) Ion_trans PF00520.31 ORF72990 - 0.00018 20.8 1.0 0.00021 20.6 1.0 1.0 1 0 0 1 1 1 1 Ion transport protein DUF2651 PF10852.8 ORF72990 - 0.58 10.8 4.4 0.89 10.2 4.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2651) FAM72 PF14976.6 ORF72637 - 0.15 12.2 0.9 0.23 11.6 0.9 1.2 1 0 0 1 1 1 0 FAM72 protein LMSTEN PF07988.12 ORF72625 - 0.067 12.7 0.1 0.18 11.3 0.1 1.7 1 0 0 1 1 1 0 LMSTEN motif Ogr_Delta PF04606.12 ORF72472 - 0.0029 17.6 0.0 0.0048 16.8 0.0 1.4 1 0 0 1 1 1 1 Ogr/Delta-like zinc finger Response_reg PF00072.24 ORF71709 - 0.00021 21.4 0.0 0.00024 21.2 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Arc_trans_TRASH PF08394.10 ORF71709 - 0.025 14.9 0.8 7 7.1 0.1 2.4 2 0 0 2 2 2 0 Archaeal TRASH domain UPF0242 PF06785.11 ORF71358 - 0.0014 18.8 0.0 0.0014 18.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Sre PF03125.18 ORF71358 - 0.0015 17.8 0.0 0.0017 17.6 0.0 1.1 1 0 0 1 1 1 1 C. elegans Sre G protein-coupled chemoreceptor BatD PF13584.6 ORF71358 - 0.015 14.1 0.0 0.019 13.8 0.0 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF456 PF04306.13 ORF71358 - 0.032 14.5 0.5 0.038 14.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF456) DUF4834 PF16118.5 ORF71358 - 0.057 14.4 0.0 0.077 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) SID-1_RNA_chan PF13965.6 ORF71358 - 0.081 11.3 0.0 0.086 11.2 0.0 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF5305 PF17231.2 ORF71358 - 0.41 10.0 2.8 2.5 7.4 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5305) RNA_pol_L_2 PF13656.6 ORF70383 - 5.6e-23 80.5 0.1 7e-23 80.2 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 ORF70383 - 8.4e-07 28.3 0.0 1.3e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain KTI12 PF08433.10 ORF70207 - 4.2e-43 147.7 0.5 4.6e-43 147.6 0.5 1.0 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_33 PF13671.6 ORF70207 - 5.6e-06 26.6 0.0 6.8e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 ORF70207 - 0.00081 18.7 0.0 0.021 14.1 0.0 2.1 1 1 0 2 2 2 1 Zeta toxin APS_kinase PF01583.20 ORF70207 - 0.0039 17.1 0.0 0.0046 16.9 0.0 1.0 1 0 0 1 1 1 1 Adenylylsulphate kinase DnaB_C PF03796.15 ORF70207 - 0.004 16.5 0.0 0.0057 16.0 0.0 1.6 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_18 PF13238.6 ORF70207 - 0.027 15.0 0.0 0.032 14.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF70207 - 0.087 13.1 0.0 0.13 12.5 0.0 1.4 1 1 0 1 1 1 0 AAA domain DUF4130 PF13566.6 ORF68536 - 0.0085 16.1 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4130 DUF4435 PF14491.6 ORF65747 - 0.042 13.7 3.6 0.047 13.6 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) DASH_Dad1 PF08649.10 ORF65747 - 0.21 11.8 1.6 0.38 11.0 0.5 1.9 2 0 0 2 2 2 0 DASH complex subunit Dad1 XhlA PF10779.9 ORF65747 - 0.75 10.0 4.8 2.4 8.5 1.9 2.3 2 0 0 2 2 2 0 Haemolysin XhlA DUF5470 PF17564.2 ORF61720 - 0.61 10.3 11.1 0.5 10.6 5.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5470) UPF0242 PF06785.11 ORF6107 - 0.0014 18.8 0.0 0.0014 18.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Sre PF03125.18 ORF6107 - 0.0015 17.8 0.0 0.0017 17.6 0.0 1.1 1 0 0 1 1 1 1 C. elegans Sre G protein-coupled chemoreceptor BatD PF13584.6 ORF6107 - 0.015 14.1 0.0 0.019 13.8 0.0 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF456 PF04306.13 ORF6107 - 0.032 14.5 0.5 0.038 14.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF456) DUF4834 PF16118.5 ORF6107 - 0.057 14.4 0.0 0.077 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) SID-1_RNA_chan PF13965.6 ORF6107 - 0.081 11.3 0.0 0.086 11.2 0.0 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF5305 PF17231.2 ORF6107 - 0.41 10.0 2.8 2.5 7.4 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5305) FYVE PF01363.21 ORF61067 - 3.3 7.9 18.6 8.2 6.7 18.6 1.8 1 1 0 1 1 1 0 FYVE zinc finger DUF1029 PF06269.12 ORF61067 - 4.7 7.4 10.2 0.8 9.9 6.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1029) UL17 PF17640.2 ORF59760 - 0.043 13.8 0.2 0.071 13.1 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized UL17 Foamy_virus_ENV PF03408.14 ORF57641 - 0.052 11.4 1.5 0.056 11.3 1.5 1.0 1 0 0 1 1 1 0 Foamy virus envelope protein Rot1 PF10681.9 ORF57465 - 0.11 12.0 0.7 0.11 12.0 0.7 1.1 1 0 0 1 1 1 0 Chaperone for protein-folding within the ER, fungal SNARE PF05739.19 ORF56729 - 0.22 11.6 0.6 4.2 7.4 0.2 2.2 2 0 0 2 2 2 0 SNARE domain ActA PF05058.12 ORF56526 - 0.21 9.9 3.6 0.23 9.8 3.6 1.2 1 0 0 1 1 1 0 ActA Protein Oest_recep PF02159.15 ORF56526 - 0.24 11.9 3.3 0.29 11.6 3.3 1.1 1 0 0 1 1 1 0 Oestrogen receptor RR_TM4-6 PF06459.12 ORF53330 - 0.016 15.1 18.5 0.018 14.9 18.5 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PriA_CRR PF18319.1 ORF53235 - 0.0026 17.7 0.8 0.0061 16.5 0.8 1.6 1 0 0 1 1 1 1 PriA DNA helicase Cys-rich region (CRR) domain DUF3551 PF12071.8 ORF53137 - 0.12 12.5 0.3 10 6.2 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3551) T2SS_PulS_OutS PF09691.10 ORF5286 - 2e-09 37.6 0.0 2.5e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 Type II secretion system pilotin lipoprotein (PulS_OutS) Porin_8 PF16966.5 ORF5286 - 0.085 11.8 0.1 0.12 11.4 0.1 1.2 1 0 0 1 1 1 0 Porin-like glycoporin RafY DUF621 PF04789.15 ORF52555 - 0.023 13.9 8.8 0.026 13.7 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF621) DUF3959 PF13105.6 ORF52463 - 0.04 13.4 0.0 0.043 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Spidroin_N PF16763.5 ORF52463 - 0.17 11.9 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Major ampullate spidroin 1, spider silk protein 1, N-term FPP PF05911.11 ORF5244 - 0.041 12.1 1.0 0.047 11.9 1.0 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil tRNA-synt_2 PF00152.20 ORF52195 - 3.3e-25 88.8 0.0 3.6e-25 88.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF52195 - 0.089 12.3 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) dCMP_cyt_deam_1 PF00383.23 ORF52152 - 0.53 10.2 6.0 1.7 8.6 0.2 2.8 2 1 1 3 3 3 0 Cytidine and deoxycytidylate deaminase zinc-binding region GPR15L PF15854.5 ORF52152 - 4.9 7.4 14.8 0.83 9.9 5.7 2.4 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 mono-CXXC PF15626.6 ORF5164 - 0.043 14.2 1.7 0.078 13.3 1.7 1.5 1 0 0 1 1 1 0 single CXXC unit Leuk-A4-hydro_C PF09127.11 ORF50645 - 9.8e-05 22.4 0.0 0.00046 20.2 0.0 1.8 1 1 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal UDPGT PF00201.18 ORF49911 - 6.6e-12 45.0 0.0 8e-12 44.7 0.0 1.0 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF49911 - 8.2e-05 22.6 0.0 0.0001 22.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF49911 - 0.1 11.8 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 Herpes_U34 PF04541.13 ORF49189 - 0.073 12.3 1.4 0.092 12.0 1.4 1.1 1 0 0 1 1 1 0 Herpesvirus virion protein U34 ABC2_membrane_3 PF12698.7 ORF47686 - 6.9 5.7 19.9 5.5 6.0 19.0 1.4 1 1 0 1 1 1 0 ABC-2 family transporter protein TFIIS_C PF01096.18 ORF47630 - 2.5e-21 75.2 6.1 2.5e-21 75.2 6.1 2.9 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 ORF47630 - 5.1e-09 35.8 0.2 5.1e-09 35.8 0.2 3.1 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.7 ORF47630 - 0.00016 21.6 11.7 0.013 15.5 4.7 2.4 2 0 0 2 2 2 2 Transposase zinc-ribbon domain C1_1 PF00130.22 ORF47630 - 0.004 17.0 10.1 0.011 15.7 0.2 2.6 2 1 0 2 2 2 1 Phorbol esters/diacylglycerol binding domain (C1 domain) TF_Zn_Ribbon PF08271.12 ORF47630 - 0.011 15.3 0.2 0.011 15.3 0.2 2.8 2 2 0 2 2 2 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 ORF47630 - 0.022 14.1 9.3 8.9 5.9 0.0 3.9 4 0 0 4 4 4 0 zinc-ribbon domain Baculo_LEF5_C PF11792.8 ORF47630 - 0.024 14.3 0.9 0.07 12.8 0.9 1.9 1 1 0 1 1 1 0 Baculoviridae late expression factor 5 C-terminal domain PhnA_Zn_Ribbon PF08274.12 ORF47630 - 0.053 13.5 1.5 0.053 13.5 1.5 2.8 3 0 0 3 3 2 0 PhnA Zinc-Ribbon zf-TFIIB PF13453.6 ORF47630 - 0.12 11.7 11.8 0.4 10.1 0.6 2.9 2 1 0 2 2 2 0 Transcription factor zinc-finger zf-DNA_Pol PF08996.10 ORF47630 - 0.13 12.0 5.0 0.09 12.5 2.5 1.8 2 0 0 2 2 2 0 DNA Polymerase alpha zinc finger Rubredoxin PF00301.20 ORF47630 - 0.26 11.4 14.1 2.8 8.1 0.1 4.0 4 0 0 4 4 4 0 Rubredoxin Nudix_N_2 PF14803.6 ORF47630 - 0.46 10.5 13.5 3.2 7.7 1.5 3.6 3 1 0 3 3 3 0 Nudix N-terminal zinc_ribbon_13 PF09855.9 ORF47630 - 0.5 10.6 4.7 8.1 6.7 0.1 3.2 3 0 0 3 3 3 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) C1_4 PF07975.12 ORF47630 - 0.72 10.1 12.8 0.32 11.3 3.5 3.0 2 2 1 3 3 3 0 TFIIH C1-like domain HypA PF01155.19 ORF47630 - 1.1 9.3 11.0 2.6 8.1 4.3 2.8 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 ORF47630 - 2.3 8.3 17.1 4.2 7.5 1.0 2.6 2 2 0 2 2 2 0 Double zinc ribbon UPF0547 PF10571.9 ORF47630 - 2.7 8.1 20.0 3.3 7.9 0.5 4.3 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 zinc_ribbon_4 PF13717.6 ORF47630 - 3.8 7.5 19.0 2.5 8.1 0.4 4.0 4 0 0 4 4 4 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 ORF47630 - 4.7 7.2 10.9 23 5.0 0.2 2.8 2 1 0 2 2 2 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 ORF47630 - 5.8 7.1 20.0 3.6 7.8 1.7 4.5 4 1 1 5 5 5 0 Zinc ribbon domain DUF3797 PF12677.7 ORF47630 - 7 6.6 8.6 70 3.4 0.0 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF3797) zinc_ribbon_15 PF17032.5 ORF47630 - 7.3 7.4 15.0 22 5.9 7.6 3.0 1 1 1 2 2 2 0 zinc-ribbon family Glutaredoxin PF00462.24 ORF47622 - 1.1e-18 67.1 0.0 1.9e-18 66.4 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin Stc1 PF12898.7 ORF47541 - 0.39 11.3 6.4 25 5.5 0.3 3.0 3 0 0 3 3 3 0 Stc1 domain Bowman-Birk_leg PF00228.20 ORF47541 - 3.4 8.2 10.6 6.2 7.3 0.2 3.0 3 0 0 3 3 3 0 Bowman-Birk serine protease inhibitor family Glyco_transf_18 PF15024.6 ORF47525 - 0.047 12.3 0.6 0.053 12.1 0.6 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Amb_V_allergen PF03913.13 ORF47525 - 0.095 12.7 1.1 0.095 12.7 1.1 2.7 3 0 0 3 3 3 0 Amb V Allergen Chordopox_A33R PF05966.12 ORF47421 - 0.05 12.9 2.9 0.069 12.4 2.9 1.2 1 0 0 1 1 1 0 Chordopoxvirus A33R protein DUF1647 PF07801.11 ORF47080 - 0.00072 19.3 1.1 0.0013 18.5 1.3 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1647) GP17 PF17420.2 ORF47080 - 0.081 13.1 1.9 0.13 12.4 1.9 1.4 1 1 0 1 1 1 0 Superinfection exclusion gene product 17 ST7 PF04184.12 ORF46486 - 8.6 4.7 6.8 9.9 4.5 6.8 1.0 1 0 0 1 1 1 0 ST7 protein MFMR_assoc PF16596.5 ORF46172 - 0.0088 16.5 3.4 0.012 16.1 3.4 1.1 1 0 0 1 1 1 1 Disordered region downstream of MFMR Cloacin PF03515.14 ORF44672 - 0.079 12.6 0.1 0.089 12.5 0.1 1.0 1 0 0 1 1 1 0 Colicin-like bacteriocin tRNase domain Anti-TRAP PF15777.5 ORF43894 - 0.32 11.0 0.2 0.32 11.0 0.2 2.3 3 0 0 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein Mx_ML PF17536.2 ORF43734 - 0.0096 15.7 0.2 0.012 15.3 0.2 1.3 1 1 0 1 1 1 1 Matrix and Matrix long proteins N-terminal DUF1258 PF06869.12 ORF43106 - 0.11 12.0 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) His_binding PF02098.16 ORF42336 - 0.14 12.2 5.6 0.18 11.9 5.6 1.2 1 0 0 1 1 1 0 Tick histamine binding protein GATase_4 PF13230.6 ORF42155 - 1.2e-34 119.4 0.0 1.4e-34 119.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferases class-II PX PF00787.24 ORF41766 - 7.1e-08 32.4 0.1 1e-07 31.9 0.1 1.2 1 0 0 1 1 1 1 PX domain Nse4-Nse3_bdg PF15412.6 ORF41766 - 0.15 12.2 0.0 1.3 9.2 0.0 2.2 2 0 0 2 2 2 0 Binding domain of Nse4/EID3 to Nse3-MAGE DUF4781 PF16013.5 ORF41632 - 0.14 11.0 3.1 0.16 10.7 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) UPF0242 PF06785.11 ORF40597 - 0.0014 18.8 0.0 0.0014 18.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Sre PF03125.18 ORF40597 - 0.0015 17.8 0.0 0.0017 17.6 0.0 1.1 1 0 0 1 1 1 1 C. elegans Sre G protein-coupled chemoreceptor BatD PF13584.6 ORF40597 - 0.015 14.1 0.0 0.019 13.8 0.0 1.1 1 0 0 1 1 1 0 Oxygen tolerance DUF456 PF04306.13 ORF40597 - 0.032 14.5 0.5 0.038 14.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF456) DUF4834 PF16118.5 ORF40597 - 0.057 14.4 0.0 0.077 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) SID-1_RNA_chan PF13965.6 ORF40597 - 0.081 11.3 0.0 0.086 11.2 0.0 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF5305 PF17231.2 ORF40597 - 0.41 10.0 2.8 2.5 7.4 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5305) Gp-FAR-1 PF05823.12 ORF40482 - 0.013 15.9 1.3 0.013 15.9 1.3 1.6 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DUF778 PF05608.12 ORF39851 - 0.19 12.1 0.3 0.2 12.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) Glyco_transf_18 PF15024.6 ORF391 - 0.047 12.3 0.6 0.053 12.1 0.6 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Amb_V_allergen PF03913.13 ORF391 - 0.095 12.7 1.1 0.095 12.7 1.1 2.7 3 0 0 3 3 3 0 Amb V Allergen HCO3_cotransp PF00955.21 ORF3864 - 0.048 12.5 0.0 0.055 12.3 0.0 1.1 1 0 0 1 1 1 0 HCO3- transporter family FAM72 PF14976.6 ORF38430 - 0.15 12.2 0.9 0.23 11.6 0.9 1.2 1 0 0 1 1 1 0 FAM72 protein PolC_DP2 PF03833.13 ORF38127 - 0.046 11.6 0.0 0.049 11.5 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Phage_int_SAM_5 PF13102.6 ORF38126 - 0.0022 18.3 0.3 0.0033 17.7 0.2 1.3 1 1 0 1 1 1 1 Phage integrase SAM-like domain DUF4274 PF14096.6 ORF38126 - 0.031 14.2 0.2 0.099 12.6 0.2 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4274) CAF1C_H4-bd PF12265.8 ORF36555 - 0.22 11.8 0.2 5.1 7.4 0.1 2.2 2 0 0 2 2 2 0 Histone-binding protein RBBP4 or subunit C of CAF1 complex MFMR_assoc PF16596.5 ORF35797 - 0.0088 16.5 3.4 0.012 16.1 3.4 1.1 1 0 0 1 1 1 1 Disordered region downstream of MFMR Tropomyosin_1 PF12718.7 ORF35074 - 0.028 14.5 0.1 0.044 14.0 0.1 1.2 1 0 0 1 1 1 0 Tropomyosin like TMF_DNA_bd PF12329.8 ORF35074 - 0.068 13.2 0.5 0.098 12.7 0.5 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF4140 PF13600.6 ORF35074 - 0.15 12.5 0.0 0.18 12.3 0.0 1.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) MORN PF02493.20 ORF3445 - 2e-19 68.2 43.4 1.9e-07 30.6 4.8 5.7 6 0 0 6 6 6 4 MORN repeat Tudor_2 PF18104.1 ORF3445 - 1.1e-06 28.2 9.8 0.37 10.5 0.1 4.5 3 1 1 4 4 4 4 Jumonji domain-containing protein 2A Tudor domain Caprin-1_C PF12287.8 ORF3445 - 0.7 10.0 2.4 0.88 9.7 2.4 1.2 1 0 0 1 1 1 0 Cytoplasmic activation/proliferation-associated protein-1 C term DUF1107 PF06526.12 ORF3445 - 3 7.8 6.9 3.5 7.6 0.5 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1107) DUF3959 PF13105.6 ORF34449 - 0.04 13.4 0.0 0.043 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) Spidroin_N PF16763.5 ORF34449 - 0.17 11.9 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Major ampullate spidroin 1, spider silk protein 1, N-term DUF1147 PF06615.11 ORF34134 - 0.028 14.4 0.5 3.8 7.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1147) DUF1244 PF06844.11 ORF33985 - 0.25 11.5 4.5 0.36 11.0 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1244) YjbE PF11106.8 ORF33371 - 0.17 12.1 4.5 0.25 11.6 4.5 1.3 1 0 0 1 1 1 0 Exopolysaccharide production protein YjbE Wyosine_form PF08608.12 ORF33093 - 0.046 14.1 0.1 0.071 13.5 0.1 1.2 1 0 0 1 1 1 0 Wyosine base formation Presenilin PF01080.17 ORF32695 - 0.028 13.2 3.2 0.03 13.1 3.2 1.0 1 0 0 1 1 1 0 Presenilin PhoLip_ATPase_N PF16209.5 ORF32695 - 0.27 10.9 6.9 0.16 11.7 3.4 2.4 2 1 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal Ndc1_Nup PF09531.10 ORF32175 - 7.4 5.1 10.9 8.9 4.9 10.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DsbG_N PF18257.1 ORF31458 - 0.011 15.8 0.1 0.019 15.1 0.1 1.3 1 0 0 1 1 1 0 Disulfide isomerase DsbG N-terminal DUF1681 PF07933.14 ORF31458 - 0.026 14.2 0.4 0.03 14.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) TRAP_alpha PF03896.16 ORF3093 - 0.0047 16.2 0.0 0.0064 15.7 0.0 1.1 1 0 0 1 1 1 1 Translocon-associated protein (TRAP), alpha subunit CytochromB561_N PF09786.9 ORF3093 - 0.015 14.3 0.6 0.016 14.3 0.6 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal DUF842 PF05811.13 ORF30214 - 0.024 14.3 3.9 0.035 13.8 3.9 1.5 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) LOH1CR12 PF10158.9 ORF29408 - 0.043 13.8 1.9 0.11 12.5 0.2 1.9 1 1 1 2 2 2 0 Tumour suppressor protein F-box PF00646.33 ORF28541 - 0.11 12.4 0.6 2.4 8.1 0.1 2.4 2 0 0 2 2 2 0 F-box domain Aldo_ket_red PF00248.21 ORF27008 - 1.2e-17 64.1 0.0 1.4e-17 63.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Presenilin PF01080.17 ORF26221 - 0.028 13.2 3.2 0.03 13.1 3.2 1.0 1 0 0 1 1 1 0 Presenilin PhoLip_ATPase_N PF16209.5 ORF26221 - 0.27 10.9 6.9 0.16 11.7 3.4 2.4 2 1 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal DUF3405 PF11885.8 ORF24477 - 0.024 13.3 0.0 0.026 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) Bcr-Abl_Oligo PF09036.10 ORF24447 - 0.018 15.0 1.1 0.066 13.2 0.5 2.0 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain DUF4947 PF16305.5 ORF24447 - 0.023 14.7 0.1 0.028 14.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4947) E1_dh PF00676.20 ORF24447 - 0.045 12.7 0.3 0.06 12.3 0.3 1.1 1 0 0 1 1 1 0 Dehydrogenase E1 component EHN PF06441.12 ORF24447 - 0.11 12.8 0.1 0.17 12.3 0.1 1.3 1 0 0 1 1 1 0 Epoxide hydrolase N terminus DUF5588 PF17826.1 ORF23569 - 0.21 10.4 1.6 0.26 10.1 1.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5588) MFS_Mycoplasma PF07672.13 ORF23478 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF23478 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF23478 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF23478 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF23478 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF23478 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF23478 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF23478 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) V-ATPase_G PF03179.15 ORF21662 - 4.9e-21 75.2 18.7 5.5e-21 75.1 18.7 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit GA PF01468.17 ORF21662 - 0.0052 17.0 3.7 0.066 13.5 2.7 2.3 1 1 1 2 2 2 1 GA module Mod_r PF07200.13 ORF21662 - 0.0059 16.7 14.7 0.0074 16.4 14.7 1.1 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein JMY PF15871.5 ORF21662 - 0.008 15.5 9.2 0.009 15.3 9.2 1.1 1 0 0 1 1 1 1 Junction-mediating and -regulatory protein DUF1640 PF07798.11 ORF21662 - 0.0081 16.2 7.3 0.011 15.8 7.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) OmpH PF03938.14 ORF21662 - 0.061 13.7 18.0 0.076 13.4 18.0 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) FPRL1_inhibitor PF16104.5 ORF21662 - 0.09 12.9 3.5 2 8.6 0.1 2.1 1 1 0 2 2 2 0 Formyl peptide receptor-like 1 inhibitory protein UPF0242 PF06785.11 ORF21662 - 0.12 12.5 13.1 0.14 12.3 13.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus zf-CpG_bind_C PF12269.8 ORF21662 - 0.14 12.0 7.7 0.15 11.8 7.7 1.0 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain ATP-synt_B PF00430.18 ORF21662 - 0.14 12.3 20.4 0.4 10.8 20.4 1.7 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) DUF4047 PF13256.6 ORF21662 - 0.14 12.4 12.6 0.2 11.8 12.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4047) DUF4736 PF15883.5 ORF21662 - 0.16 11.7 6.0 0.18 11.5 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) DUF3450 PF11932.8 ORF21662 - 0.17 11.1 12.3 0.2 10.9 12.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF3552 PF12072.8 ORF21662 - 0.24 10.8 21.0 1.1 8.6 21.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF2937 PF11157.8 ORF21662 - 0.24 11.1 2.0 0.35 10.6 2.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2937) Prominin PF05478.11 ORF21662 - 0.27 9.2 8.5 0.3 9.0 8.5 1.0 1 0 0 1 1 1 0 Prominin V-ATPase_G_2 PF16999.5 ORF21662 - 0.4 11.1 19.1 1.3 9.5 19.1 1.7 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit Mt_ATP-synt_B PF05405.14 ORF21662 - 0.4 10.3 16.1 0.52 9.9 1.6 2.0 1 1 1 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) FliD_N PF02465.18 ORF21662 - 0.45 11.3 4.9 0.95 10.2 4.9 1.8 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus KIP1 PF07765.12 ORF21662 - 0.48 10.6 10.8 0.11 12.6 6.0 1.9 1 1 1 2 2 2 0 KIP1-like protein DUF1664 PF07889.12 ORF21662 - 0.51 10.4 8.5 0.94 9.5 8.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) CENP-I PF07778.11 ORF21662 - 0.61 8.7 6.5 0.73 8.5 6.5 1.0 1 0 0 1 1 1 0 Mis6 DUF724 PF05266.14 ORF21662 - 0.65 9.8 13.3 0.71 9.7 13.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) CCAP PF11105.8 ORF21662 - 1.1 9.2 8.7 0.16 11.9 3.6 2.0 1 1 1 2 2 2 0 Arthropod cardioacceleratory peptide 2a HAUS6_N PF14661.6 ORF21662 - 1.8 8.1 10.6 2.2 7.8 10.6 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF883 PF05957.13 ORF21662 - 2.2 9.0 7.8 26 5.5 7.8 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CemA PF03040.14 ORF21662 - 2.3 8.1 7.6 2.6 7.9 7.6 1.1 1 0 0 1 1 1 0 CemA family DUF4407 PF14362.6 ORF21662 - 2.7 7.3 8.9 3 7.1 8.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) KfrA_N PF11740.8 ORF21662 - 5.8 7.6 15.6 1.3 9.7 6.1 2.1 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term TMPIT PF07851.13 ORF21662 - 6.5 5.9 8.6 6.7 5.9 8.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4435 PF14491.6 ORF20085 - 0.042 13.7 3.6 0.047 13.6 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) DASH_Dad1 PF08649.10 ORF20085 - 0.21 11.8 1.6 0.38 11.0 0.5 1.9 2 0 0 2 2 2 0 DASH complex subunit Dad1 XhlA PF10779.9 ORF20085 - 0.75 10.0 4.8 2.4 8.5 1.9 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Rot1 PF10681.9 ORF20070 - 0.11 12.0 0.7 0.11 12.0 0.7 1.1 1 0 0 1 1 1 0 Chaperone for protein-folding within the ER, fungal MFS_Mycoplasma PF07672.13 ORF19840 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF19840 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF19840 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF19840 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF19840 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF19840 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF19840 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF19840 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) Zn_peptidase_2 PF04298.12 ORF19240 - 0.8 9.1 6.3 0.53 9.7 5.0 1.3 1 1 0 1 1 1 0 Putative neutral zinc metallopeptidase DUF818 PF05677.12 ORF19240 - 2.4 7.0 8.8 2.9 6.8 8.8 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) Aldo_ket_red PF00248.21 ORF19155 - 1.2e-17 64.1 0.0 1.4e-17 63.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Tax PF02959.16 ORF19023 - 0.058 12.9 3.0 0.08 12.4 3.0 1.2 1 0 0 1 1 1 0 HTLV Tax LMSTEN PF07988.12 ORF18917 - 0.067 12.7 0.1 0.18 11.3 0.1 1.7 1 0 0 1 1 1 0 LMSTEN motif DUF2722 PF10846.8 ORF18695 - 0.034 13.1 16.5 0.039 12.9 16.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) RR_TM4-6 PF06459.12 ORF18695 - 0.71 9.6 16.7 0.76 9.5 16.7 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 LptF_LptG PF03739.14 ORF18695 - 0.78 8.5 3.4 0.99 8.2 3.4 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG PDDEXK_6 PF04720.12 ORF18695 - 0.98 9.3 12.6 1.1 9.2 12.6 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function SDA1 PF05285.12 ORF18695 - 1.5 8.2 23.2 1.6 8.1 23.2 1.1 1 0 0 1 1 1 0 SDA1 Tim54 PF11711.8 ORF18695 - 2.3 6.9 13.3 2.3 6.9 13.3 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 CSG2 PF16965.5 ORF18695 - 2.3 7.1 5.2 2.6 6.9 5.2 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator TRAP_alpha PF03896.16 ORF18695 - 2.4 7.3 12.7 3.1 6.9 12.7 1.3 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit NPR3 PF03666.13 ORF18695 - 4.1 6.1 15.8 4.2 6.1 15.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Nop14 PF04147.12 ORF18695 - 4.7 5.3 23.1 4.7 5.3 23.1 1.1 1 0 0 1 1 1 0 Nop14-like family CLN3 PF02487.17 ORF18695 - 5.2 6.0 8.1 5.8 5.8 8.1 1.1 1 0 0 1 1 1 0 CLN3 protein AAA_11 PF13086.6 ORF18695 - 5.9 6.6 13.7 6 6.6 13.7 1.2 1 0 0 1 1 1 0 AAA domain Pox_Ag35 PF03286.14 ORF18695 - 5.9 6.6 18.9 7.4 6.3 18.9 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Zip PF02535.22 ORF18695 - 6.8 5.8 11.7 6.9 5.8 11.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Trehalose_recp PF06151.13 ORF17838 - 0.011 14.4 0.0 0.015 13.9 0.0 1.2 1 0 0 1 1 1 0 Trehalose receptor DUF167 PF02594.16 ORF17669 - 1e-09 38.3 0.1 1.5e-09 37.8 0.1 1.2 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 PsbP PF01789.16 ORF17475 - 0.051 13.7 0.0 0.067 13.3 0.0 1.1 1 0 0 1 1 1 0 PsbP PHR PF08005.12 ORF152439 - 8.6e-08 33.0 0.0 1.1e-07 32.6 0.0 1.2 1 0 0 1 1 1 1 PHR domain DUF3781 PF12636.7 ORF152393 - 0.026 14.4 1.4 0.044 13.7 1.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) Fz PF01392.22 ORF152255 - 0.99 10.0 9.4 6.7 7.4 0.2 2.2 1 1 1 2 2 2 0 Fz domain Chordopox_A33R PF05966.12 ORF151733 - 0.05 12.9 2.9 0.069 12.4 2.9 1.2 1 0 0 1 1 1 0 Chordopoxvirus A33R protein Presenilin PF01080.17 ORF150904 - 0.028 13.2 3.2 0.03 13.1 3.2 1.0 1 0 0 1 1 1 0 Presenilin PhoLip_ATPase_N PF16209.5 ORF150904 - 0.27 10.9 6.9 0.16 11.7 3.4 2.4 2 1 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal Tri3 PF07428.11 ORF148239 - 0.2 10.5 0.0 0.26 10.1 0.0 1.1 1 0 0 1 1 1 0 15-O-acetyltransferase Tri3 DUF4880 PF16220.5 ORF14787 - 0.042 13.7 3.1 0.12 12.3 3.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4880) Glutaredoxin PF00462.24 ORF147562 - 1e-09 38.5 0.0 1.8e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin FANCL_C PF11793.8 ORF147562 - 0.0054 16.9 0.3 0.014 15.5 0.1 1.7 2 0 0 2 2 2 1 FANCL C-terminal domain Exonuc_X-T_C PF08411.10 ORF147562 - 0.058 12.5 0.0 0.074 12.2 0.0 1.1 1 0 0 1 1 1 0 Exonuclease C-terminal Thioredoxin_2 PF13098.6 ORF147562 - 0.09 13.2 0.1 0.14 12.7 0.1 1.4 1 0 0 1 1 1 0 Thioredoxin-like domain ArAE_1_C PF11728.8 ORF147528 - 0.013 15.5 1.2 0.019 15.0 0.9 1.5 1 1 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain DUF1359 PF07097.11 ORF147528 - 0.035 14.4 2.5 0.46 10.8 2.5 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1359) DUF1043 PF06295.12 ORF147528 - 0.04 13.9 0.1 0.043 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) RPA_interact_M PF14767.6 ORF147528 - 2.1 9.0 6.4 8.5 7.0 6.4 2.0 1 1 0 1 1 1 0 Replication protein A interacting middle RNA_pol_Rpb4 PF03874.16 ORF146883 - 5.8e-08 33.1 0.7 6.9e-08 32.9 0.7 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb4 zf-LITAF-like PF10601.9 ORF145325 - 0.00091 19.4 2.1 0.00091 19.4 2.1 1.7 2 1 0 2 2 2 1 LITAF-like zinc ribbon domain Longin_2 PF18639.1 ORF143187 - 0.007 16.2 0.8 0.0086 16.0 0.8 1.2 1 0 0 1 1 1 1 Yeast longin domain RPAP2_Rtr1 PF04181.13 ORF142075 - 0.19 12.1 5.1 0.31 11.4 0.2 2.8 3 0 0 3 3 3 0 Rtr1/RPAP2 family MFS_Mycoplasma PF07672.13 ORF142025 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF142025 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF142025 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF142025 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF142025 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF142025 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF142025 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF142025 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) PAN_3 PF08277.12 ORF141731 - 0.086 12.7 7.5 0.23 11.3 7.5 1.7 1 0 0 1 1 1 0 PAN-like domain Presenilin PF01080.17 ORF141525 - 0.028 13.2 3.2 0.03 13.1 3.2 1.0 1 0 0 1 1 1 0 Presenilin PhoLip_ATPase_N PF16209.5 ORF141525 - 0.27 10.9 6.9 0.16 11.7 3.4 2.4 2 1 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal Herpes_U34 PF04541.13 ORF141437 - 0.073 12.3 1.4 0.092 12.0 1.4 1.1 1 0 0 1 1 1 0 Herpesvirus virion protein U34 Ogr_Delta PF04606.12 ORF140915 - 0.0029 17.6 0.0 0.0048 16.8 0.0 1.4 1 0 0 1 1 1 1 Ogr/Delta-like zinc finger Bystin PF05291.11 ORF14054 - 1.6e-31 109.7 0.1 1.8e-31 109.5 0.1 1.0 1 0 0 1 1 1 1 Bystin Toxin_TOLIP PF00087.21 ORF14037 - 1.6 9.0 15.8 0.14 12.5 9.2 2.3 1 1 0 2 2 2 0 Snake toxin and toxin-like protein RloB PF13707.6 ORF139739 - 0.029 14.6 0.3 0.035 14.3 0.3 1.1 1 0 0 1 1 1 0 RloB-like protein Glutaredoxin PF00462.24 ORF139609 - 1.9e-14 53.6 0.2 2.8e-14 53.1 0.2 1.3 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 ORF139609 - 8.6e-05 22.9 0.0 0.00012 22.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF139609 - 0.00096 19.4 0.0 0.0014 18.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF4880 PF16220.5 ORF138415 - 0.042 13.7 3.1 0.12 12.3 3.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4880) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks230.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks230.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks230.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks230.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_Mycoplasma PF07672.13 ORF134816 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF134816 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF134816 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF134816 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF134816 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF134816 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF134816 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF134816 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) Ribosomal_L19 PF01245.20 ORF134028 - 4.9e-47 158.5 1.5 5.4e-47 158.3 1.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L19 LMSTEN PF07988.12 ORF13354 - 0.067 12.7 0.1 0.18 11.3 0.1 1.7 1 0 0 1 1 1 0 LMSTEN motif HisKA PF00512.25 ORF133130 - 4e-06 26.8 0.1 6.3e-06 26.1 0.1 1.4 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain FAD_binding_7 PF03441.14 ORF133130 - 0.05 13.1 0.1 0.061 12.8 0.1 1.3 1 1 0 1 1 1 0 FAD binding domain of DNA photolyase FAM167 PF11652.8 ORF133130 - 0.078 13.5 0.6 3.2 8.3 0.1 2.2 1 1 1 2 2 2 0 FAM167 Snf7 PF03357.21 ORF133018 - 6.6e-08 32.3 14.6 7.7e-08 32.1 14.6 1.0 1 0 0 1 1 1 1 Snf7 DUF3287 PF11690.8 ORF133018 - 0.012 15.4 1.0 0.019 14.7 1.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3287) TBCC_N PF16752.5 ORF133018 - 0.049 14.1 7.3 0.44 11.0 2.4 2.3 1 1 1 2 2 2 0 Tubulin-specific chaperone C N-terminal domain Enkurin PF13864.6 ORF133018 - 0.056 13.9 7.9 0.26 11.8 7.9 1.9 1 1 0 1 1 1 0 Calmodulin-binding OSCP PF00213.18 ORF133018 - 0.074 13.2 3.0 0.086 13.0 3.0 1.2 1 0 0 1 1 1 0 ATP synthase delta (OSCP) subunit CorA PF01544.18 ORF133018 - 0.12 11.6 2.7 0.089 12.1 0.7 1.7 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein DUF2252 PF10009.9 ORF133018 - 0.37 9.8 3.1 0.41 9.7 3.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) CREPT PF16566.5 ORF133018 - 0.38 10.9 6.9 0.12 12.5 1.3 2.0 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Arc_PepC_II PF06847.11 ORF133018 - 1.8 9.1 4.6 9.2 6.9 0.6 2.2 1 1 1 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II OmpH PF03938.14 ORF133018 - 1.9 8.8 13.2 3.5 7.9 13.2 1.5 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) RNA_pol_3_Rpc31 PF11705.8 ORF132885 - 0.03 14.6 11.8 0.033 14.4 11.8 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 NOA36 PF06524.12 ORF132885 - 2.5 7.3 15.3 2.9 7.1 15.3 1.1 1 0 0 1 1 1 0 NOA36 protein DUF4518 PF15008.6 ORF131518 - 0.017 14.3 0.5 0.019 14.2 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4518) SPW PF03779.14 ORF131309 - 0.014 15.0 0.1 0.019 14.5 0.1 1.2 1 0 0 1 1 1 0 SPW repeat DUF1970 PF09301.10 ORF131010 - 0.015 15.5 0.3 0.02 15.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1970) CBM_19 PF03427.13 ORF131010 - 0.87 9.6 7.2 3.1 7.8 0.1 2.4 2 0 0 2 2 2 0 Carbohydrate binding domain (family 19) Rotamase PF00639.21 ORF130594 - 6.6e-27 94.3 0.1 7.6e-27 94.1 0.1 1.0 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF130594 - 8.8e-22 77.8 0.0 1e-21 77.7 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF130594 - 7.5e-07 30.0 0.0 8.7e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain SesA PF17107.5 ORF130594 - 0.071 13.3 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Gp-FAR-1 PF05823.12 ORF129899 - 0.013 15.9 1.3 0.013 15.9 1.3 1.6 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DUF202 PF02656.15 ORF129167 - 3e-16 59.6 6.0 1.4e-15 57.5 1.7 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF202) DUF1129 PF06570.11 ORF129167 - 0.00011 21.7 0.2 0.00013 21.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) NMN_transporter PF04973.12 ORF129167 - 0.0018 18.3 0.4 0.0027 17.7 0.2 1.3 1 1 0 1 1 1 1 Nicotinamide mononucleotide transporter DUF2627 PF11118.8 ORF129167 - 0.0051 17.4 1.5 0.14 12.7 0.9 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2627) Chordopox_A13L PF05961.11 ORF129167 - 8.9 6.6 8.2 59 4.0 7.8 2.0 2 0 0 2 2 2 0 Chordopoxvirus A13L protein MPTase-PolyVal PF18818.1 ORF127286 - 0.00023 21.2 0.7 0.00023 21.2 0.0 1.4 2 0 0 2 2 2 1 Metallopeptidase superfamily domain DUF3679 PF12438.8 ORF126289 - 0.13 12.0 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3679) ARGLU PF15346.6 ORF126127 - 0.013 15.4 16.8 0.016 15.1 16.8 1.2 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 Exonuc_VII_L PF02601.15 ORF126127 - 0.027 14.0 8.5 0.03 13.9 8.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit HlyD_2 PF12700.7 ORF126127 - 0.094 11.4 2.8 0.1 11.3 2.8 1.1 1 0 0 1 1 1 0 HlyD family secretion protein Sds3 PF08598.11 ORF126127 - 0.18 11.8 6.1 0.21 11.5 6.1 1.1 1 0 0 1 1 1 0 Sds3-like HNOBA PF07701.14 ORF126127 - 2.3 7.6 5.8 1.6 8.1 0.0 2.3 1 1 1 2 2 2 0 Heme NO binding associated DUF1690 PF07956.11 ORF126127 - 2.6 8.5 12.8 5.2 7.5 12.7 1.5 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF3619 PF12279.8 ORF126127 - 3.5 8.0 10.8 9.7 6.5 9.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3619) Herpes_UL25 PF01499.16 ORF126127 - 6 5.3 9.3 6.9 5.1 9.3 1.1 1 0 0 1 1 1 0 Herpesvirus UL25 family HSCB_C PF07743.13 ORF126127 - 8.1 7.0 22.5 7.5 7.1 3.4 3.1 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain DSS1_SEM1 PF05160.13 ORF126022 - 0.00073 19.6 3.9 0.0012 18.8 3.9 1.4 1 0 0 1 1 1 1 DSS1/SEM1 family Sigma70_ner PF04546.13 ORF126022 - 0.015 15.2 2.6 0.018 14.9 2.6 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region GNAT_acetyltr_2 PF13718.6 ORF126022 - 0.14 11.6 0.9 0.17 11.2 0.9 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase 2 DUF1189 PF06691.11 ORF124559 - 1.2 8.7 5.2 1.3 8.6 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) Keratin_B2 PF01500.17 ORF123973 - 0.0023 18.0 6.5 0.0029 17.6 6.5 1.2 1 0 0 1 1 1 1 Keratin, high sulfur B2 protein eIF2A PF08662.11 ORF123955 - 0.021 14.7 0.1 0.024 14.5 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A DUF1690 PF07956.11 ORF123955 - 0.025 15.0 1.0 0.029 14.8 1.0 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF1281 PF06924.11 ORF123290 - 0.0036 16.9 0.0 0.0042 16.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1281) DUF2207 PF09972.9 ORF123290 - 0.0083 14.9 0.4 0.0083 14.9 0.4 1.8 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) YuiB PF14068.6 ORF123290 - 0.021 15.4 1.5 0.32 11.6 0.6 2.1 1 1 1 2 2 2 0 Putative membrane protein Ac76 PF05814.11 ORF123290 - 0.067 13.2 1.8 1.5 8.8 0.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) VirB3 PF05101.13 ORF123290 - 0.27 11.5 5.4 0.44 10.8 0.3 2.1 1 1 1 2 2 2 0 Type IV secretory pathway, VirB3-like protein Albumin_I_a PF16720.5 ORF121330 - 7.7 6.5 7.0 5.1 7.1 1.1 3.0 3 1 1 4 4 4 0 Albumin I chain a Dicistro_VP4 PF11492.8 ORF120370 - 0.21 11.6 0.7 1.7 8.6 0.6 2.2 1 1 1 2 2 2 0 Cricket paralysis virus, VP4 Glyco_hydro_39 PF01229.17 ORF118675 - 0.14 10.7 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 39 Fz PF01392.22 ORF117234 - 2.8e-05 24.7 0.3 3.2e-05 24.5 0.3 1.2 1 0 0 1 1 1 1 Fz domain Paramyxo_P PF01806.17 ORF117213 - 0.061 12.7 0.6 0.069 12.6 0.6 1.2 1 0 0 1 1 1 0 Paramyxovirinae P phosphoprotein C-terminal region SDP_N PF12278.8 ORF117213 - 0.32 11.1 2.4 0.41 10.8 2.4 1.1 1 0 0 1 1 1 0 Sex determination protein N terminal BUD22 PF09073.10 ORF116167 - 0.087 12.1 8.5 0.12 11.8 8.5 1.1 1 0 0 1 1 1 0 BUD22 CDC45 PF02724.14 ORF116167 - 0.66 8.2 4.6 0.7 8.1 4.6 1.0 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF116167 - 2 6.4 14.4 2.1 6.4 14.4 1.1 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 ORF116167 - 4.2 5.5 8.6 4.3 5.4 8.6 1.0 1 0 0 1 1 1 0 Nop14-like family CS PF04969.16 ORF115870 - 7.7e-13 49.3 0.2 9.8e-13 48.9 0.2 1.1 1 0 0 1 1 1 1 CS domain zf-C6H2 PF15801.5 ORF115681 - 0.089 13.1 0.6 0.089 13.1 0.6 2.2 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding Mt_ATP-synt_D PF05873.12 ORF115677 - 0.0064 16.3 0.7 0.0088 15.9 0.5 1.3 1 1 0 1 1 1 1 ATP synthase D chain, mitochondrial (ATP5H) FCH PF00611.23 ORF115677 - 0.0068 16.7 0.0 0.0086 16.3 0.0 1.3 1 0 0 1 1 1 1 Fes/CIP4, and EFC/F-BAR homology domain NADH-UOR_E PF16514.5 ORF115677 - 0.02 15.2 0.8 0.04 14.2 0.4 1.7 1 1 1 2 2 2 0 putative NADH-ubiquinone oxidoreductase chain E MSA-2c PF12238.8 ORF115677 - 0.065 13.2 0.9 0.076 13.0 0.9 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF268 PF03269.14 ORF115677 - 0.068 13.0 0.2 0.16 11.8 0.1 1.6 1 1 1 2 2 2 0 Caenorhabditis protein of unknown function, DUF268 SLATT_2 PF18183.1 ORF115669 - 0.031 14.1 0.1 0.041 13.7 0.1 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 2 DUF1127 PF06568.11 ORF115553 - 0.08 12.7 1.3 0.17 11.7 1.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1127) Kinesin PF00225.23 ORF1151 - 8.8e-25 87.3 0.2 9.7e-25 87.2 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF1151 - 2.2e-16 60.1 0.0 2.5e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 Microtubule binding GH43_C2 PF17851.1 ORF1151 - 0.069 12.9 0.1 0.079 12.7 0.1 1.1 1 0 0 1 1 1 0 Beta xylosidase C-terminal Concanavalin A-like domain zf-LITAF-like PF10601.9 ORF114345 - 1.4e-15 57.3 15.2 1.8e-15 57.0 15.2 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain T4_baseplate PF12322.8 ORF114345 - 2 7.9 4.3 2 7.8 0.4 2.0 1 1 1 2 2 2 0 T4 bacteriophage base plate protein Pkinase PF00069.25 ORF114179 - 1e-23 84.1 0.3 1.1e-23 83.9 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF114179 - 3.1e-16 59.4 0.1 3.4e-16 59.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF114179 - 0.0022 17.0 0.1 0.0023 16.9 0.1 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF114179 - 0.003 16.9 0.0 0.0035 16.7 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF114179 - 0.024 14.0 0.0 0.026 13.9 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Antimicrobial19 PF08225.11 ORF114179 - 0.32 10.6 0.1 0.32 10.6 0.1 2.1 2 0 0 2 2 2 0 Pseudin antimicrobial peptide Pkinase PF00069.25 ORF113529 - 0.00029 20.3 0.0 0.00036 20.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF113529 - 0.014 14.7 0.0 0.019 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase Stomoxyn PF11585.8 ORF113440 - 0.023 14.7 0.2 0.081 13.0 0.2 2.0 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn EcsC PF12787.7 ORF113440 - 0.15 11.7 7.3 0.18 11.5 7.3 1.1 1 0 0 1 1 1 0 EcsC protein family CENP-N PF05238.13 ORF113440 - 0.21 10.9 11.0 0.28 10.5 11.0 1.2 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Sox_N PF12444.8 ORF113440 - 1.9 9.6 7.1 0.63 11.2 3.0 1.9 2 0 0 2 2 2 0 Sox developmental protein N terminal ICA69 PF04629.14 ORF113440 - 2.7 8.2 11.1 3.2 8.0 11.1 1.0 1 0 0 1 1 1 0 Islet cell autoantigen ICA69, C-terminal domain ELFV_dehydrog_N PF02812.18 ORF112843 - 0.23 11.3 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DUF3689 PF12463.8 ORF112603 - 0.0056 16.0 0.3 0.0059 16.0 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3689) DCX PF03607.17 ORF112603 - 0.015 15.4 0.1 0.025 14.7 0.1 1.4 1 0 0 1 1 1 0 Doublecortin KH_5 PF13184.6 ORF112603 - 0.041 14.0 0.5 0.07 13.2 0.0 1.5 2 0 0 2 2 2 0 NusA-like KH domain Arf PF00025.21 ORF112425 - 3.5e-29 101.5 0.0 3.8e-29 101.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF112425 - 0.002 17.6 0.0 0.0024 17.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF112425 - 0.0078 15.8 0.0 0.0078 15.8 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF112425 - 0.044 14.0 0.0 0.057 13.6 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase ABM PF03992.16 ORF11194 - 4.4e-13 49.1 0.2 5.6e-13 48.8 0.2 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase SOR PF07682.11 ORF11194 - 0.036 13.0 0.3 2.2 7.1 0.0 2.0 1 1 1 2 2 2 0 Sulphur oxygenase reductase DUF1330 PF07045.11 ORF11194 - 0.14 12.5 0.0 0.18 12.1 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1330) RNA_helicase PF00910.22 ORF110063 - 0.053 13.9 0.3 0.2 12.0 0.1 1.9 1 1 1 2 2 2 0 RNA helicase Actin PF00022.19 ORF109478 - 0.07 11.7 0.3 0.081 11.5 0.3 1.1 1 0 0 1 1 1 0 Actin Glyco_transf_18 PF15024.6 ORF108850 - 0.047 12.3 0.6 0.053 12.1 0.6 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Amb_V_allergen PF03913.13 ORF108850 - 0.095 12.7 1.1 0.095 12.7 1.1 2.7 3 0 0 3 3 3 0 Amb V Allergen YjbE PF11106.8 ORF108013 - 0.17 12.1 4.5 0.25 11.6 4.5 1.3 1 0 0 1 1 1 0 Exopolysaccharide production protein YjbE UL17 PF17640.2 ORF107563 - 0.043 13.8 0.2 0.071 13.1 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized UL17 MFS_Mycoplasma PF07672.13 ORF106366 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF106366 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF106366 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF106366 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF106366 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF106366 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF106366 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF106366 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) Spore_II_R PF09551.10 ORF106177 - 0.051 14.0 1.9 0.066 13.7 1.9 1.3 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) LRR_2 PF07723.13 ORF105777 - 2.6 8.8 6.6 7 7.5 0.3 3.0 3 0 0 3 3 3 0 Leucine Rich Repeat Tuberin PF03542.16 ORF105759 - 0.014 14.5 0.0 0.014 14.5 0.0 1.1 1 0 0 1 1 1 0 Tuberin Flu_C_NS1 PF03506.13 ORF105751 - 0.042 13.8 0.8 0.058 13.4 0.8 1.2 1 0 0 1 1 1 0 Influenza C non-structural protein (NS1) RAP1 PF07218.11 ORF105682 - 0.93 7.7 3.8 1 7.5 3.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Zn_peptidase_2 PF04298.12 ORF105612 - 0.8 9.1 6.3 0.53 9.7 5.0 1.3 1 1 0 1 1 1 0 Putative neutral zinc metallopeptidase DUF818 PF05677.12 ORF105612 - 2.4 7.0 8.8 2.9 6.8 8.8 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) Presenilin PF01080.17 ORF104738 - 0.028 13.2 3.2 0.03 13.1 3.2 1.0 1 0 0 1 1 1 0 Presenilin PhoLip_ATPase_N PF16209.5 ORF104738 - 0.27 10.9 6.9 0.16 11.7 3.4 2.4 2 1 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal Neuralized PF07177.12 ORF104287 - 6.9e-05 22.9 0.0 8.5e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Neuralized Presenilin PF01080.17 ORF104257 - 0.028 13.2 3.2 0.03 13.1 3.2 1.0 1 0 0 1 1 1 0 Presenilin PhoLip_ATPase_N PF16209.5 ORF104257 - 0.27 10.9 6.9 0.16 11.7 3.4 2.4 2 1 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal DUF4064 PF13273.6 ORF104082 - 0.044 14.1 0.0 0.064 13.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) Histone PF00125.24 ORF10407 - 5.1e-14 52.8 0.0 6e-14 52.5 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 ORF10407 - 0.09 12.9 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold MFS_Mycoplasma PF07672.13 ORF102929 - 0.0099 15.2 5.1 0.027 13.7 0.4 2.0 2 0 0 2 2 2 1 Mycoplasma MFS transporter TMEM154 PF15102.6 ORF102929 - 0.036 14.0 4.7 0.075 12.9 1.9 2.0 1 1 1 2 2 2 0 TMEM154 protein family RXLR PF16810.5 ORF102929 - 0.042 14.3 0.2 0.074 13.5 0.2 1.6 1 1 1 2 2 2 0 RXLR phytopathogen effector protein, Avirulence activity DUF2500 PF10694.9 ORF102929 - 0.059 13.9 0.2 0.059 13.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) ABC2_membrane_3 PF12698.7 ORF102929 - 0.15 11.2 4.4 0.037 13.1 0.9 1.6 1 1 1 2 2 2 0 ABC-2 family transporter protein Spore_YhaL PF14147.6 ORF102929 - 0.3 10.8 1.2 2 8.1 0.3 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL PDR_CDR PF06422.12 ORF102929 - 0.89 9.5 2.9 8.9 6.3 0.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Ac76 PF05814.11 ORF102929 - 0.96 9.5 6.7 1.7 8.7 1.1 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) Ribosomal_L22 PF00237.19 ORF101550 - 1.9e-34 118.0 2.0 2.1e-34 117.8 2.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Peptidase_S49_N PF08496.10 ORF10149 - 0.16 12.0 0.7 0.17 11.9 0.7 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Acetyltransf_10 PF13673.7 ORF101188 - 0.021 14.7 0.0 0.023 14.7 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain CRT10 PF08728.10 ORF100918 - 0.0099 14.1 0.3 0.014 13.6 0.3 1.2 1 0 0 1 1 1 1 CRT10 DUF4620 PF15399.6 ORF100918 - 9 6.7 6.8 1.9 8.9 0.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4620) SEEEED PF14797.6 NODE_52520_length_340_cov_1.531148_g44599_i0reverse_frame_1 - 0.13 12.4 18.8 0.16 12.1 18.8 1.2 1 0 0 1 1 1 0 Serine-rich region of AP3B1, clathrin-adaptor complex DUF3807 PF12720.7 NODE_52520_length_340_cov_1.531148_g44599_i0reverse_frame_1 - 4.7 7.4 12.3 5.7 7.2 12.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Glycos_transf_1 PF00534.20 NODE_52519_length_340_cov_1.603279_g44598_i0forward_frame_1 - 4.6e-06 26.3 0.0 5.7e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 NODE_52519_length_340_cov_1.603279_g44598_i0forward_frame_1 - 0.002 18.6 0.0 0.0027 18.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 DVL PF08137.12 NODE_52513_length_340_cov_1.960656_g44592_i0reverse_frame_1 - 0.21 11.5 2.9 7.3 6.6 0.7 2.5 2 0 0 2 2 2 0 DVL family Utp21 PF04192.12 NODE_52510_length_340_cov_2.098361_g44589_i0reverse_frame_1 - 0.014 14.9 0.1 0.016 14.7 0.1 1.1 1 0 0 1 1 1 0 Utp21 specific WD40 associated putative domain Epiglycanin_C PF14654.6 NODE_52505_length_340_cov_2.272131_g44584_i0forward_frame_1 - 0.11 12.5 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region A_deaminase_N PF08451.11 NODE_52504_length_340_cov_2.288525_g44583_i0reverse_frame_1 - 0.00063 20.0 0.4 0.00083 19.6 0.4 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase N-terminal Relaxase PF03432.14 NODE_52504_length_340_cov_2.288525_g44583_i0reverse_frame_1 - 0.054 13.1 1.6 0.058 13.0 1.6 1.1 1 0 0 1 1 1 0 Relaxase/Mobilisation nuclease domain DUF4534 PF15049.6 NODE_52503_length_340_cov_2.344262_g44582_i0forward_frame_1 - 0.054 13.2 2.6 0.07 12.9 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4534) ODV-E18 PF10717.9 NODE_52499_length_340_cov_2.567213_g44578_i0forward_frame_1 - 0.25 11.2 1.3 0.41 10.6 1.1 1.5 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 BofA PF07441.11 NODE_52489_length_340_cov_10.803279_g44568_i0reverse_frame_1 - 0.0036 17.4 1.7 0.05 13.8 0.1 2.1 2 0 0 2 2 2 1 SigmaK-factor processing regulatory protein BofA Melittin PF01372.17 NODE_52489_length_340_cov_10.803279_g44568_i0reverse_frame_1 - 0.22 11.5 0.6 14 5.8 0.2 2.4 2 0 0 2 2 2 0 Melittin DUF2070 PF09843.9 NODE_52488_length_340_cov_16.796721_g44567_i0reverse_frame_1 - 0.86 7.8 5.6 0.93 7.7 5.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF5354 PF17305.2 NODE_52484_length_340_cov_52.586885_g44563_i0forward_frame_1 - 0.00025 21.2 1.0 0.0003 21.0 1.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5354) Alliinase_C PF04864.13 NODE_52479_length_340_cov_56.885246_g44558_i0forward_frame_1 - 0.099 11.5 0.3 0.11 11.3 0.3 1.1 1 0 0 1 1 1 0 Allinase Herpes_capsid PF06112.11 NODE_52478_length_340_cov_57.819672_g44557_i0forward_frame_1 - 0.7 9.9 3.3 0.84 9.7 3.3 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein zf-C6H2 PF15801.5 NODE_52477_length_340_cov_61.885246_g44556_i0reverse_frame_1 - 0.47 10.8 3.6 3.2 8.1 0.1 2.3 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding EcoRII-N PF09217.10 NODE_52476_length_340_cov_64.718033_g44555_i0reverse_frame_1 - 0.056 13.2 1.1 0.87 9.3 0.3 2.0 1 1 1 2 2 2 0 Restriction endonuclease EcoRII, N-terminal zf-H3C2 PF16721.5 NODE_52476_length_340_cov_64.718033_g44555_i0forward_frame_1 - 0.18 12.2 2.1 0.21 11.9 0.4 1.9 1 1 1 2 2 2 0 Zinc-finger like, probable DNA-binding NhaB PF06450.12 NODE_52475_length_340_cov_67.829508_g44554_i0forward_frame_1 - 0.017 14.0 1.6 0.019 13.8 1.6 1.1 1 0 0 1 1 1 0 Bacterial Na+/H+ antiporter B (NhaB) zf-B_box PF00643.24 NODE_52469_length_340_cov_90.488525_g44548_i0reverse_frame_1 - 7.5e-07 29.2 1.2 1.2e-06 28.6 1.2 1.3 1 0 0 1 1 1 1 B-box zinc finger AAA_12 PF13087.6 NODE_52467_length_340_cov_94.485246_g44546_i0forward_frame_1 - 2.6e-23 82.7 0.4 3.1e-23 82.5 0.4 1.1 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 NODE_52467_length_340_cov_94.485246_g44546_i0forward_frame_1 - 2.2e-05 24.2 0.1 4.3e-05 23.2 0.1 1.5 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 NODE_52467_length_340_cov_94.485246_g44546_i0forward_frame_1 - 0.0065 16.2 0.0 0.0079 16.0 0.0 1.1 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase zf-RING_12 PF17976.1 NODE_52464_length_340_cov_119.836066_g44543_i0reverse_frame_1 - 0.1 12.9 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain CAP_N PF01213.19 NODE_52455_length_340_cov_170.881967_g44534_i0reverse_frame_1 - 0.36 10.3 15.4 0.46 9.9 15.4 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal RskA PF10099.9 NODE_52455_length_340_cov_170.881967_g44534_i0forward_frame_1 - 0.032 14.5 6.6 0.04 14.2 6.6 1.2 1 0 0 1 1 1 0 Anti-sigma-K factor rskA Corona_nucleoca PF00937.18 NODE_52455_length_340_cov_170.881967_g44534_i0forward_frame_1 - 0.17 10.9 1.8 0.19 10.7 1.8 1.1 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Stonin2_N PF12016.8 NODE_52453_length_340_cov_182.583607_g44532_i0reverse_frame_1 - 0.021 14.3 1.6 0.023 14.1 1.6 1.1 1 0 0 1 1 1 0 Stonin 2 SR-25 PF10500.9 NODE_52453_length_340_cov_182.583607_g44532_i0reverse_frame_1 - 0.033 13.8 11.8 0.037 13.6 11.8 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_52453_length_340_cov_182.583607_g44532_i0reverse_frame_1 - 0.086 13.5 8.4 0.1 13.3 8.4 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein TAP35_44 PF07265.11 NODE_52450_length_340_cov_204.039344_g44529_i0reverse_frame_1 - 0.22 11.5 1.0 0.73 9.9 1.0 1.8 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 Dymeclin PF09742.9 NODE_52450_length_340_cov_204.039344_g44529_i0reverse_frame_1 - 0.32 9.4 2.4 0.29 9.5 2.4 1.2 1 0 0 1 1 1 0 Dyggve-Melchior-Clausen syndrome protein RNA_pol_Rpb4 PF03874.16 NODE_52446_length_340_cov_1011.334426_g44525_i0forward_frame_1 - 6.2e-09 36.2 1.2 3.6e-08 33.8 1.2 1.8 1 1 0 1 1 1 1 RNA polymerase Rpb4 FKBP_C PF00254.28 NODE_52443_length_340_cov_84310.763934_g44522_i0forward_frame_1 - 5.2e-32 110.0 0.0 6.2e-32 109.8 0.0 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Chordopox_A30L PF06015.12 NODE_52443_length_340_cov_84310.763934_g44522_i0forward_frame_1 - 0.0086 15.9 1.8 0.012 15.5 1.8 1.2 1 0 0 1 1 1 1 Chordopoxvirus A30L protein Toxin_28 PF08115.11 NODE_52431_length_341_cov_1.849673_g44510_i0reverse_frame_1 - 0.14 12.0 0.7 0.22 11.4 0.7 1.2 1 0 0 1 1 1 0 SFI toxin family cNMP_binding PF00027.29 NODE_52431_length_341_cov_1.849673_g44510_i0forward_frame_1 - 0.0054 16.8 0.0 0.0089 16.1 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain UBM PF14377.6 NODE_52431_length_341_cov_1.849673_g44510_i0forward_frame_1 - 0.12 11.9 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin binding region zf-TFIIB PF13453.6 NODE_52427_length_341_cov_2.078431_g44506_i0forward_frame_1 - 0.016 14.5 1.4 0.5 9.7 0.1 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger APG9 PF04109.16 NODE_52412_length_341_cov_2.594771_g44491_i0forward_frame_1 - 0.4 9.7 7.3 0.45 9.5 7.3 1.0 1 0 0 1 1 1 0 Autophagy protein Apg9 Suv3_C_1 PF18147.1 NODE_52406_length_341_cov_2.931373_g44485_i0reverse_frame_1 - 0.18 11.7 1.0 0.51 10.3 1.0 1.7 1 1 0 1 1 1 0 Suv3 C-terminal domain 1 AA_permease PF00324.21 NODE_52405_length_341_cov_3.133987_g44484_i0reverse_frame_1 - 1.1e-32 113.2 15.0 1.2e-32 113.2 15.0 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_52405_length_341_cov_3.133987_g44484_i0reverse_frame_1 - 5.2e-10 38.7 13.1 5.9e-10 38.5 13.1 1.0 1 0 0 1 1 1 1 Amino acid permease SAYSvFN PF10260.9 NODE_52404_length_341_cov_3.284314_g44483_i0forward_frame_1 - 0.14 12.1 0.2 0.14 12.1 0.2 1.6 2 0 0 2 2 2 0 Uncharacterized conserved domain (SAYSvFN) Ank_4 PF13637.6 NODE_52400_length_341_cov_3.460784_g44479_i0forward_frame_1 - 0.041 14.5 0.0 1.1 9.9 0.0 2.5 2 1 0 2 2 2 0 Ankyrin repeats (many copies) Rad50_zn_hook PF04423.14 NODE_52399_length_341_cov_3.467320_g44478_i0forward_frame_1 - 0.0085 15.9 0.2 0.015 15.1 0.2 1.4 1 0 0 1 1 1 1 Rad50 zinc hook motif TP53IP5 PF15331.6 NODE_52392_length_341_cov_27.513072_g44471_i0reverse_frame_1 - 0.18 11.9 0.8 0.21 11.7 0.8 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 YabA PF06156.13 NODE_52389_length_341_cov_50.973856_g44468_i0reverse_frame_1 - 0.032 14.8 3.9 0.032 14.8 3.9 1.7 1 1 1 2 2 2 0 Initiation control protein YabA DUF1043 PF06295.12 NODE_52389_length_341_cov_50.973856_g44468_i0reverse_frame_1 - 0.057 13.4 6.2 0.069 13.2 6.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) LCIB_C_CA PF18599.1 NODE_52389_length_341_cov_50.973856_g44468_i0reverse_frame_1 - 0.13 11.6 1.9 0.14 11.4 1.5 1.3 1 1 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases Gaa1 PF04114.14 NODE_52389_length_341_cov_50.973856_g44468_i0forward_frame_1 - 8.7 5.2 7.3 9.6 5.1 7.3 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component TB2_DP1_HVA22 PF03134.19 NODE_52382_length_341_cov_71.846405_g44461_i0forward_frame_1 - 0.2 11.6 0.9 2.1 8.3 0.0 2.1 2 0 0 2 2 2 0 TB2/DP1, HVA22 family HMw1_D2 PF18254.1 NODE_52378_length_341_cov_82.379085_g44457_i0reverse_frame_1 - 0.0049 17.2 0.3 0.0075 16.6 0.1 1.5 1 1 0 1 1 1 1 HMW1 domain 2 RRM_1 PF00076.22 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 9.6e-12 44.6 0.1 1.5e-11 44.0 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 0.02 14.9 0.1 0.029 14.4 0.1 1.3 1 0 0 1 1 1 0 RNA binding motif RL PF17797.1 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 0.039 13.9 0.0 0.059 13.3 0.0 1.3 1 0 0 1 1 1 0 RL domain RRM_5 PF13893.6 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 0.046 13.3 0.0 0.053 13.1 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_52376_length_341_cov_93.712418_g44455_i0forward_frame_1 - 0.11 12.7 0.1 0.33 11.1 0.1 1.7 1 1 0 1 1 1 0 RNA recognition motif BRCT PF00533.26 NODE_52369_length_341_cov_142.313725_g44448_i0forward_frame_1 - 0.023 15.1 0.1 0.048 14.0 0.0 1.5 2 0 0 2 2 2 0 BRCA1 C Terminus (BRCT) domain LapA_dom PF06305.11 NODE_52366_length_341_cov_193.045752_g44445_i0reverse_frame_1 - 0.09 12.6 8.1 0.25 11.2 2.5 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Baculo_11_kDa PF06143.11 NODE_52366_length_341_cov_193.045752_g44445_i0forward_frame_1 - 0.075 12.6 1.8 0.12 11.9 1.8 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family TRP PF06011.12 NODE_52366_length_341_cov_193.045752_g44445_i0forward_frame_1 - 2.6 6.7 4.2 1.8 7.2 0.1 1.9 2 0 0 2 2 2 0 Transient receptor potential (TRP) ion channel DUF5560 PF17715.1 NODE_52363_length_341_cov_254.156863_g44442_i0forward_frame_1 - 0.11 11.9 6.4 0.13 11.7 6.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5560) RuvB_C PF05491.13 NODE_52362_length_341_cov_255.957516_g44441_i0forward_frame_1 - 0.2 11.5 0.0 0.3 11.0 0.0 1.2 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain Pyr_redox_2 PF07992.14 NODE_52356_length_342_cov_1.442997_g44435_i0reverse_frame_1 - 1.4e-09 37.7 0.0 1.5e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HEAT PF02985.22 NODE_52350_length_342_cov_1.866450_g44429_i0reverse_frame_1 - 0.0032 17.6 0.2 2.4 8.6 0.0 3.1 3 0 0 3 3 3 1 HEAT repeat L_lactis_RepB_C PF06430.12 NODE_52350_length_342_cov_1.866450_g44429_i0reverse_frame_1 - 0.023 14.7 0.2 0.027 14.5 0.2 1.1 1 0 0 1 1 1 0 Lactococcus lactis RepB C-terminus HEAT_2 PF13646.6 NODE_52350_length_342_cov_1.866450_g44429_i0reverse_frame_1 - 0.08 13.3 0.1 0.14 12.6 0.1 1.5 1 1 0 1 1 1 0 HEAT repeats Ribosomal_S8 PF00410.19 NODE_52350_length_342_cov_1.866450_g44429_i0reverse_frame_1 - 0.12 12.4 0.2 0.71 9.8 0.3 1.8 1 1 1 2 2 2 0 Ribosomal protein S8 YdiH PF15930.5 NODE_52345_length_342_cov_2.345277_g44424_i0reverse_frame_1 - 0.043 14.0 0.0 0.072 13.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function Kinesin PF00225.23 NODE_52337_length_342_cov_2.902280_g44416_i0forward_frame_1 - 3e-08 33.0 0.3 4e-08 32.6 0.0 1.4 2 0 0 2 2 2 1 Kinesin motor domain MRI PF15325.6 NODE_52336_length_342_cov_2.931596_g44415_i0forward_frame_1 - 0.012 16.7 0.0 0.015 16.3 0.0 1.2 1 0 0 1 1 1 0 Modulator of retrovirus infection AIF_C PF14721.6 NODE_52336_length_342_cov_2.931596_g44415_i0forward_frame_1 - 0.014 15.8 0.8 0.017 15.5 0.8 1.2 1 0 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term DUF3418 PF11898.8 NODE_52332_length_342_cov_3.179153_g44411_i0forward_frame_1 - 1.7e-10 40.3 0.1 1.9e-10 40.1 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) DegT_DnrJ_EryC1 PF01041.17 NODE_52328_length_342_cov_3.618893_g44407_i0reverse_frame_1 - 2e-31 109.7 0.2 2.1e-31 109.5 0.2 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family GCD14 PF08704.10 NODE_52328_length_342_cov_3.618893_g44407_i0reverse_frame_1 - 0.033 13.8 0.0 0.037 13.7 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Exog_C PF18026.1 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_1 - 0.031 14.3 0.0 0.058 13.4 0.0 1.4 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain DUF4980 PF16352.5 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_1 - 0.051 13.6 0.0 0.063 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4980) UPF0158 PF03682.13 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_1 - 0.18 11.8 0.4 0.24 11.4 0.4 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) Dis3l2_C_term PF17877.1 NODE_52327_length_342_cov_4.084691_g44406_i0forward_frame_1 - 0.19 12.1 1.2 1.2 9.5 0.4 2.3 2 1 0 2 2 2 0 DIS3-like exonuclease 2 C terminal Patched PF02460.18 NODE_52312_length_342_cov_62.967427_g44391_i0forward_frame_1 - 7.7e-06 24.3 0.4 8.5e-06 24.1 0.4 1.0 1 0 0 1 1 1 1 Patched family Sterol-sensing PF12349.8 NODE_52312_length_342_cov_62.967427_g44391_i0forward_frame_1 - 0.069 13.0 2.3 0.089 12.6 2.3 1.1 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation PalH PF08733.10 NODE_52312_length_342_cov_62.967427_g44391_i0forward_frame_1 - 0.16 10.9 2.1 0.2 10.6 2.1 1.1 1 0 0 1 1 1 0 PalH/RIM21 MMPL PF03176.15 NODE_52312_length_342_cov_62.967427_g44391_i0forward_frame_1 - 0.24 10.3 1.5 0.28 10.1 1.5 1.1 1 0 0 1 1 1 0 MMPL family DLIC PF05783.11 NODE_52304_length_342_cov_76.097720_g44383_i0reverse_frame_1 - 0.07 12.0 0.0 0.078 11.8 0.0 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) Neuropep_like PF15161.6 NODE_52302_length_342_cov_83.250814_g44381_i0reverse_frame_1 - 0.068 12.9 0.4 0.14 11.8 0.4 1.5 1 0 0 1 1 1 0 Neuropeptide-like PDR_CDR PF06422.12 NODE_52293_length_342_cov_110.465798_g44372_i0reverse_frame_1 - 0.12 12.2 1.7 0.19 11.7 1.7 1.3 1 0 0 1 1 1 0 CDR ABC transporter Syndecan PF01034.20 NODE_52293_length_342_cov_110.465798_g44372_i0reverse_frame_1 - 7.7 6.5 7.5 3.3 7.7 4.4 1.9 1 1 1 2 2 2 0 Syndecan domain Phage-MuB_C PF09077.11 NODE_52292_length_342_cov_110.602606_g44371_i0reverse_frame_1 - 0.089 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Mu B transposition protein, C terminal DUF3437 PF11919.8 NODE_52290_length_342_cov_117.358306_g44369_i0reverse_frame_1 - 0.098 12.6 0.2 0.13 12.2 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DUF2505 PF10698.9 NODE_52290_length_342_cov_117.358306_g44369_i0forward_frame_1 - 0.13 12.4 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2505) 2OG-FeII_Oxy_3 PF13640.6 NODE_52284_length_342_cov_312.384365_g44363_i0forward_frame_1 - 3.8e-12 46.9 0.0 4.4e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 NODE_52284_length_342_cov_312.384365_g44363_i0forward_frame_1 - 2.4e-08 34.5 0.0 3e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily E3_binding PF02817.17 NODE_52283_length_342_cov_322.967427_g44362_i0forward_frame_1 - 0.094 13.1 0.4 0.23 11.8 0.4 1.7 1 0 0 1 1 1 0 e3 binding domain HypA PF01155.19 NODE_52279_length_342_cov_2339.306189_g44359_i0forward_frame_1 - 1.2 9.2 8.1 2.2 8.3 8.1 1.4 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BAR_2 PF10455.9 NODE_52269_length_343_cov_1.623377_g44349_i0reverse_frame_3 - 0.086 12.0 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Bin/amphiphysin/Rvs domain for vesicular trafficking EF-hand_1 PF00036.32 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 8.8e-06 24.9 1.5 1.8e-05 23.9 1.5 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 7.6e-05 22.3 1.6 0.00018 21.2 1.6 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 0.0023 17.7 0.8 0.0047 16.7 0.8 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 0.0047 16.4 1.3 0.0078 15.7 1.3 1.3 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 NODE_52266_length_343_cov_1.665584_g44346_i0forward_frame_3 - 0.029 14.8 0.4 0.055 13.9 0.4 1.4 1 0 0 1 1 1 0 EF-hand domain pair UQ_con PF00179.26 NODE_52265_length_343_cov_1.879870_g44345_i0forward_frame_2 - 1.4e-18 66.9 0.0 1.6e-18 66.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 NODE_52265_length_343_cov_1.879870_g44345_i0forward_frame_2 - 0.00088 19.5 0.0 0.0011 19.3 0.0 1.2 1 0 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 NODE_52265_length_343_cov_1.879870_g44345_i0forward_frame_2 - 0.029 14.1 0.0 0.033 13.9 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B Dynactin_p22 PF07426.11 NODE_52263_length_343_cov_2.051948_g44343_i0reverse_frame_3 - 0.033 14.0 0.5 0.041 13.7 0.5 1.1 1 0 0 1 1 1 0 Dynactin subunit p22 MRF_C1 PF13887.6 NODE_52263_length_343_cov_2.051948_g44343_i0reverse_frame_3 - 0.31 10.2 1.4 0.97 8.7 0.1 2.2 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 PDEase_I PF00233.19 NODE_52261_length_343_cov_2.100649_g44341_i0reverse_frame_3 - 3.1e-33 115.5 0.4 3.5e-33 115.3 0.4 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase HD PF01966.22 NODE_52261_length_343_cov_2.100649_g44341_i0reverse_frame_3 - 0.16 12.2 0.2 0.19 11.9 0.2 1.3 1 1 0 1 1 1 0 HD domain PADR1 PF08063.12 NODE_52261_length_343_cov_2.100649_g44341_i0forward_frame_3 - 0.37 10.6 2.9 13 5.7 0.4 2.3 2 0 0 2 2 2 0 PADR1 (NUC008) domain zf-XS PF03470.14 NODE_52255_length_343_cov_2.551948_g44335_i0reverse_frame_3 - 0.1 12.9 0.4 0.18 12.1 0.4 1.4 1 0 0 1 1 1 0 XS zinc finger domain DUF997 PF06196.12 NODE_52253_length_343_cov_2.724026_g44333_i0reverse_frame_3 - 0.59 10.2 4.7 0.14 12.2 1.1 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF997) THAP PF05485.12 NODE_52253_length_343_cov_2.724026_g44333_i0forward_frame_3 - 0.0098 16.8 0.8 0.013 16.5 0.8 1.3 1 1 0 1 1 1 1 THAP domain DUF3915 PF13054.6 NODE_52253_length_343_cov_2.724026_g44333_i0forward_frame_3 - 0.053 13.5 0.8 0.077 13.0 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) TcdB_N PF12918.7 NODE_52253_length_343_cov_2.724026_g44333_i0forward_frame_3 - 2.8 8.3 9.5 1.3 9.4 2.6 2.7 2 1 1 3 3 3 0 TcdB toxin N-terminal helical domain AKAP28 PF14469.6 NODE_52252_length_343_cov_2.727273_g44332_i0forward_frame_3 - 0.22 11.3 0.0 0.34 10.7 0.0 1.2 1 0 0 1 1 1 0 28 kDa A-kinase anchor DUF3487 PF11990.8 NODE_52249_length_343_cov_2.840909_g44329_i0forward_frame_2 - 0.086 12.7 0.5 0.11 12.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DUF1168 PF06658.12 NODE_52248_length_343_cov_2.879870_g44328_i0reverse_frame_2 - 0.04 13.7 24.2 0.051 13.4 24.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Presenilin PF01080.17 NODE_52248_length_343_cov_2.879870_g44328_i0reverse_frame_2 - 1.2 7.8 6.4 1.2 7.9 6.4 1.0 1 0 0 1 1 1 0 Presenilin DUF2828 PF11443.8 NODE_52248_length_343_cov_2.879870_g44328_i0reverse_frame_2 - 2.5 6.1 11.5 2.7 6.0 11.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) CDC45 PF02724.14 NODE_52248_length_343_cov_2.879870_g44328_i0reverse_frame_2 - 4 5.6 11.3 3.6 5.8 11.3 1.0 1 0 0 1 1 1 0 CDC45-like protein PSI_PsaJ PF01701.18 NODE_52248_length_343_cov_2.879870_g44328_i0forward_frame_2 - 0.012 16.2 0.6 0.036 14.6 0.6 1.8 1 0 0 1 1 1 0 Photosystem I reaction centre subunit IX / PsaJ Glyco_hydro_39 PF01229.17 NODE_52247_length_343_cov_2.905844_g44327_i0reverse_frame_3 - 0.12 10.9 0.0 0.13 10.8 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 39 DUF1936 PF09151.10 NODE_52247_length_343_cov_2.905844_g44327_i0forward_frame_2 - 0.013 15.4 0.0 0.025 14.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) Blt1 PF12754.7 NODE_52243_length_343_cov_4.068182_g44323_i0reverse_frame_2 - 0.092 13.1 1.3 0.1 12.9 1.3 1.1 1 0 0 1 1 1 0 Blt1 N-terminal domain DUF1700 PF08006.11 NODE_52242_length_343_cov_5.405844_g44322_i0reverse_frame_3 - 0.23 11.0 4.0 0.28 10.7 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) UPF0564 PF10595.9 NODE_52242_length_343_cov_5.405844_g44322_i0forward_frame_2 - 2e-16 60.0 9.8 2.8e-16 59.5 9.8 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0564 Sm_like PF16243.5 NODE_52241_length_343_cov_8.896104_g44321_i0forward_frame_2 - 0.031 14.4 0.0 1.5 9.0 0.0 2.1 2 0 0 2 2 2 0 Sm_like domain Mucin PF01456.17 NODE_52240_length_343_cov_23.165584_g44320_i0reverse_frame_3 - 0.033 14.2 16.7 0.037 14.0 16.7 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein SSP160 PF06933.11 NODE_52240_length_343_cov_23.165584_g44320_i0reverse_frame_3 - 0.45 8.6 15.2 0.45 8.7 15.2 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF5360 PF17314.2 NODE_52239_length_343_cov_28.295455_g44319_i0reverse_frame_2 - 0.041 13.9 0.1 0.047 13.8 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5360) GDE_N PF12439.8 NODE_52238_length_343_cov_40.253247_g44318_i0reverse_frame_2 - 0.094 12.1 0.2 0.11 11.9 0.2 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme N terminal SRP-alpha_N PF04086.13 NODE_52238_length_343_cov_40.253247_g44318_i0reverse_frame_2 - 4 7.3 15.6 4.3 7.2 15.6 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal AAA_23 PF13476.6 NODE_52238_length_343_cov_40.253247_g44318_i0reverse_frame_2 - 8.7 6.8 12.0 10 6.5 12.0 1.2 1 0 0 1 1 1 0 AAA domain Imm74 PF15603.6 NODE_52236_length_343_cov_47.055195_g44316_i0reverse_frame_2 - 0.051 13.8 0.0 0.14 12.4 0.0 1.7 1 1 1 2 2 2 0 Immunity protein 74 LRR_4 PF12799.7 NODE_52235_length_343_cov_48.808442_g44315_i0forward_frame_2 - 0.084 13.3 0.1 1.3 9.6 0.1 2.2 1 1 1 2 2 2 0 Leucine Rich repeats (2 copies) PHF12_MRG_bd PF16737.5 NODE_52235_length_343_cov_48.808442_g44315_i0forward_frame_2 - 0.1 12.4 0.7 11 5.9 0.2 2.6 2 1 0 2 2 2 0 PHD finger protein 12 MRG binding domain UVR PF02151.19 NODE_52232_length_343_cov_59.970779_g44312_i0forward_frame_2 - 0.00031 20.4 4.1 0.00065 19.4 4.1 1.5 1 0 0 1 1 1 1 UvrB/uvrC motif Glyco_hydro_31 PF01055.26 NODE_52229_length_343_cov_64.678571_g44309_i0reverse_frame_2 - 8.9e-19 68.0 0.1 9.7e-19 67.9 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 EamA PF00892.20 NODE_52228_length_343_cov_65.535714_g44308_i0forward_frame_3 - 3.6e-05 23.9 0.6 4.7e-05 23.6 0.6 1.1 1 0 0 1 1 1 1 EamA-like transporter family CRT-like PF08627.10 NODE_52228_length_343_cov_65.535714_g44308_i0forward_frame_3 - 0.0016 17.4 0.1 0.002 17.1 0.1 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like DoxD PF04173.13 NODE_52228_length_343_cov_65.535714_g44308_i0forward_frame_3 - 0.12 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 TQO small subunit DoxD SSL_OB PF09199.10 NODE_52226_length_343_cov_75.191558_g44306_i0forward_frame_3 - 0.013 15.8 0.1 0.019 15.3 0.1 1.3 1 0 0 1 1 1 0 Staphylococcal superantigen-like OB-fold domain DUF4263 PF14082.6 NODE_52226_length_343_cov_75.191558_g44306_i0forward_frame_3 - 0.021 15.1 0.1 0.026 14.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4263) Dockerin_1 PF00404.18 NODE_52225_length_343_cov_76.217532_g44305_i0reverse_frame_3 - 0.094 12.9 0.3 0.16 12.2 0.3 1.3 1 0 0 1 1 1 0 Dockerin type I domain Peptidase_M35 PF02102.15 NODE_52225_length_343_cov_76.217532_g44305_i0reverse_frame_2 - 0.093 11.6 0.3 0.11 11.4 0.3 1.1 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family Glycos_transf_1 PF00534.20 NODE_52224_length_343_cov_77.948052_g44304_i0forward_frame_3 - 0.015 14.8 0.1 0.018 14.6 0.1 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF1366 PF07104.11 NODE_52224_length_343_cov_77.948052_g44304_i0forward_frame_3 - 0.053 13.2 1.1 0.08 12.6 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1366) cEGF PF12662.7 NODE_52213_length_343_cov_108.253247_g44294_i0forward_frame_2 - 0.054 13.4 0.3 0.1 12.5 0.3 1.5 1 0 0 1 1 1 0 Complement Clr-like EGF-like DUF5454 PF17535.2 NODE_52211_length_343_cov_123.409091_g44292_i0reverse_frame_2 - 0.1 12.0 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5454) CD52 PF15116.6 NODE_52206_length_343_cov_163.603896_g44287_i0reverse_frame_3 - 0.092 12.8 0.3 0.18 11.9 0.3 1.5 1 0 0 1 1 1 0 CAMPATH-1 antigen Eapp_C PF10238.9 NODE_52204_length_343_cov_212.863636_g44285_i0forward_frame_3 - 0.14 12.2 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 E2F-associated phosphoprotein RNA_polI_A34 PF08208.11 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 0.0056 16.8 25.2 0.0063 16.6 25.2 1.1 1 0 0 1 1 1 1 DNA-directed RNA polymerase I subunit RPA34.5 SR-25 PF10500.9 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 0.0062 16.2 18.1 0.0066 16.1 18.1 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein GAGA_bind PF06217.12 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 1.2 9.4 16.4 1.3 9.2 16.4 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family CDC45 PF02724.14 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 1.9 6.6 21.9 2.1 6.5 21.9 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4604 PF15377.6 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_3 - 2 8.8 25.5 2.5 8.5 25.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) AP3D1 PF06375.11 NODE_52199_length_343_cov_315.701299_g44280_i0reverse_frame_2 - 0.9 9.8 11.2 1.2 9.4 11.2 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Peptidase_C53 PF05550.11 NODE_52196_length_343_cov_371.896104_g44277_i0reverse_frame_3 - 0.15 11.8 0.1 0.19 11.4 0.1 1.1 1 0 0 1 1 1 0 Pestivirus Npro endopeptidase C53 Mg296 PF09644.10 NODE_52196_length_343_cov_371.896104_g44277_i0forward_frame_2 - 0.036 14.2 0.5 1.3 9.2 0.4 2.0 1 1 1 2 2 2 0 Mg296 protein DUF4440 PF14534.6 NODE_52190_length_343_cov_7632.324675_g44271_i0reverse_frame_2 - 0.05 14.0 0.0 0.098 13.1 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4440) Prok-RING_4 PF14447.6 NODE_52190_length_343_cov_7632.324675_g44271_i0forward_frame_3 - 0.0032 17.3 3.1 0.0032 17.3 3.1 2.3 3 0 0 3 3 3 1 Prokaryotic RING finger family 4 DUF1263 PF06882.12 NODE_52190_length_343_cov_7632.324675_g44271_i0forward_frame_3 - 0.13 12.4 1.0 0.26 11.3 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1263) Phage_head_fibr PF11133.8 NODE_52187_length_344_cov_1.216828_g44268_i0forward_frame_2 - 0.09 12.2 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Head fiber protein AAA_26 PF13500.6 NODE_52186_length_344_cov_1.420712_g44267_i0reverse_frame_3 - 1.8e-12 47.5 0.0 2e-12 47.4 0.0 1.0 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 NODE_52186_length_344_cov_1.420712_g44267_i0reverse_frame_3 - 0.0091 16.1 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain BRK PF07533.16 NODE_52185_length_344_cov_1.663430_g44266_i0reverse_frame_3 - 0.14 11.8 0.0 0.29 10.8 0.0 1.6 1 0 0 1 1 1 0 BRK domain cNMP_binding PF00027.29 NODE_52183_length_344_cov_1.705502_g44264_i0reverse_frame_3 - 0.0016 18.4 0.0 0.0021 18.1 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF5408 PF17402.2 NODE_52183_length_344_cov_1.705502_g44264_i0forward_frame_2 - 2.6 8.0 5.4 0.56 10.1 1.2 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5408) Secapin PF17521.2 NODE_52182_length_344_cov_1.828479_g44263_i0reverse_frame_2 - 0.097 12.5 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 Honey bee peptides Metallothi_Euk2 PF12809.7 NODE_52182_length_344_cov_1.828479_g44263_i0forward_frame_3 - 0.47 10.7 7.7 0.81 10.0 3.9 2.2 2 0 0 2 2 2 0 Eukaryotic metallothionein SPX PF03105.19 NODE_52180_length_344_cov_1.873786_g44261_i0reverse_frame_3 - 3.2 7.6 10.7 3.3 7.5 10.7 1.0 1 0 0 1 1 1 0 SPX domain Pex24p PF06398.11 NODE_52180_length_344_cov_1.873786_g44261_i0forward_frame_3 - 0.085 11.8 4.8 0.11 11.5 4.8 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin GPI2 PF06432.11 NODE_52180_length_344_cov_1.873786_g44261_i0forward_frame_3 - 4.8 6.5 11.7 5.5 6.3 11.7 1.2 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase Nop14 PF04147.12 NODE_52180_length_344_cov_1.873786_g44261_i0forward_frame_2 - 3.5 5.7 15.2 3.8 5.6 15.2 1.0 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_52180_length_344_cov_1.873786_g44261_i0forward_frame_2 - 9.1 4.4 12.8 10 4.3 12.8 1.1 1 0 0 1 1 1 0 CDC45-like protein SDA1 PF05285.12 NODE_52180_length_344_cov_1.873786_g44261_i0forward_frame_2 - 9.9 5.5 16.6 12 5.2 16.6 1.0 1 0 0 1 1 1 0 SDA1 TIG PF01833.24 NODE_52178_length_344_cov_2.064725_g44259_i0reverse_frame_3 - 4.9e-10 39.4 6.3 6.2e-09 35.8 3.2 2.2 1 1 1 2 2 2 2 IPT/TIG domain Tyr-DNA_phospho PF06087.12 NODE_52176_length_344_cov_2.177994_g44257_i0reverse_frame_2 - 0.13 11.1 0.9 0.14 11.1 0.9 1.1 1 0 0 1 1 1 0 Tyrosyl-DNA phosphodiesterase NS3_envE PF02723.14 NODE_52171_length_344_cov_2.223301_g44252_i0reverse_frame_3 - 0.056 13.5 0.5 0.08 13.0 0.5 1.3 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E DUF5447 PF17525.2 NODE_52171_length_344_cov_2.223301_g44252_i0reverse_frame_3 - 0.11 13.0 2.6 0.19 12.2 2.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5447) Catalase PF00199.19 NODE_52171_length_344_cov_2.223301_g44252_i0reverse_frame_2 - 7.5e-43 147.1 0.1 8.2e-43 147.0 0.1 1.0 1 0 0 1 1 1 1 Catalase DUF3014 PF11219.8 NODE_52165_length_344_cov_2.653722_g44246_i0reverse_frame_3 - 0.025 14.8 0.0 0.074 13.3 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3014) NAD_binding_4 PF07993.12 NODE_52163_length_344_cov_2.857605_g44244_i0forward_frame_3 - 9.2e-15 54.5 0.0 9.5e-15 54.5 0.0 1.0 1 0 0 1 1 1 1 Male sterility protein PTN13_u3 PF16599.5 NODE_52162_length_344_cov_2.944984_g44243_i0forward_frame_2 - 0.034 14.2 0.1 0.038 14.1 0.1 1.1 1 0 0 1 1 1 0 Unstructured linker region on PTN13 protein between PDZ HCR PF07111.12 NODE_52162_length_344_cov_2.944984_g44243_i0forward_frame_2 - 0.15 10.1 0.1 0.17 10.0 0.1 1.0 1 0 0 1 1 1 0 Alpha helical coiled-coil rod protein (HCR) LacY_symp PF01306.19 NODE_52161_length_344_cov_2.987055_g44242_i0forward_frame_3 - 4.8e-51 173.8 6.0 5.3e-51 173.7 6.0 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1_like PF12832.7 NODE_52161_length_344_cov_2.987055_g44242_i0forward_frame_3 - 0.029 13.2 2.4 0.033 13.0 2.4 1.0 1 0 0 1 1 1 0 MFS_1 like family Plug PF07715.15 NODE_52160_length_344_cov_3.443366_g44241_i0reverse_frame_3 - 3e-11 43.9 0.0 4.1e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 TonB-dependent Receptor Plug Domain Lamprin PF06403.11 NODE_52158_length_344_cov_4.404531_g44239_i0forward_frame_3 - 2.8 7.9 11.8 3.5 7.6 1.6 2.1 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_52158_length_344_cov_4.404531_g44239_i0forward_frame_2 - 5.6 6.9 17.9 1.7 8.6 4.7 2.2 1 1 1 2 2 2 0 Lamprin Adeno_E4 PF05385.11 NODE_52155_length_344_cov_39.304207_g44236_i0reverse_frame_3 - 0.32 11.1 5.1 0.069 13.3 1.6 1.7 2 1 1 3 3 3 0 Mastadenovirus early E4 13 kDa protein CPDase PF07823.11 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_3 - 0.02 14.6 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 Cyclic phosphodiesterase-like protein EF-hand_1 PF00036.32 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 3.3e-23 79.4 3.9 3.1e-08 32.6 0.2 3.3 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 9.2e-19 67.7 1.2 1.9e-14 53.9 0.9 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 3.3e-18 64.0 2.7 1.9e-07 30.5 0.1 3.2 3 0 0 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 9.9e-18 62.8 1.5 1.4e-07 30.7 0.2 3.3 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 4.6e-15 55.2 2.4 7.2e-05 22.6 0.4 3.2 3 0 0 3 3 3 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 3.9e-05 23.9 0.2 0.00017 21.9 0.2 1.9 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 0.00052 19.9 2.9 0.023 14.6 1.6 2.8 1 1 2 3 3 3 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 0.0079 16.5 0.2 0.044 14.1 0.1 2.1 2 1 0 2 2 2 1 EF-hand domain Dockerin_1 PF00404.18 NODE_52149_length_344_cov_56.135922_g44230_i0reverse_frame_2 - 0.1 12.8 3.5 15 5.8 0.0 3.0 2 1 1 3 3 3 0 Dockerin type I domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks231.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks231.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks231.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks231.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3797 PF12677.7 NODE_52148_length_344_cov_56.873786_g44229_i0reverse_frame_3 - 0.027 14.3 0.0 0.047 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) DUF4789 PF16033.5 NODE_52147_length_344_cov_57.420712_g44228_i0reverse_frame_3 - 0.086 13.4 0.9 0.13 12.8 0.5 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4789) ComC PF03047.14 NODE_52145_length_344_cov_57.822006_g44226_i0forward_frame_2 - 0.16 11.8 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 COMC family PsbJ PF01788.17 NODE_52140_length_344_cov_65.294498_g44221_i0forward_frame_2 - 6.6e-10 38.7 5.1 1.1e-09 38.0 5.1 1.3 1 0 0 1 1 1 1 PsbJ Pro_CA PF00484.19 NODE_52138_length_344_cov_68.504854_g44219_i0reverse_frame_2 - 2.2e-14 54.0 0.0 2.6e-14 53.8 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase Arm_3 PF16186.5 NODE_52136_length_344_cov_72.423948_g44217_i0reverse_frame_3 - 2.1e-07 30.4 0.8 3.6e-07 29.7 0.8 1.4 1 0 0 1 1 1 1 Atypical Arm repeat HAS-barrel PF09378.10 NODE_52136_length_344_cov_72.423948_g44217_i0reverse_frame_3 - 0.048 13.8 0.1 0.068 13.3 0.1 1.4 1 1 0 1 1 1 0 HAS barrel domain zf-C3HC4_2 PF13923.6 NODE_52133_length_344_cov_74.310680_g44214_i0forward_frame_3 - 0.01 15.7 9.8 0.01 15.7 9.8 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Cortexin PF11057.8 NODE_52131_length_344_cov_80.336570_g44212_i0forward_frame_3 - 2.7 7.9 6.2 0.61 10.0 2.3 1.9 1 1 1 2 2 2 0 Cortexin of kidney PAXNEB PF05625.11 NODE_52128_length_344_cov_95.854369_g44209_i0forward_frame_2 - 5.1e-07 29.2 0.0 7.2e-07 28.7 0.0 1.2 1 1 0 1 1 1 1 PAXNEB protein YqhR PF11085.8 NODE_52126_length_344_cov_98.372168_g44207_i0reverse_frame_3 - 5.6 6.9 11.2 4.6 7.1 9.9 1.5 1 1 1 2 2 2 0 Conserved membrane protein YqhR Mog1 PF04603.12 NODE_52126_length_344_cov_98.372168_g44207_i0forward_frame_3 - 0.053 13.9 0.5 0.068 13.5 0.5 1.1 1 0 0 1 1 1 0 Ran-interacting Mog1 protein Ribosomal_L6e PF01159.19 NODE_52126_length_344_cov_98.372168_g44207_i0forward_frame_3 - 0.091 13.3 0.3 0.091 13.3 0.3 1.7 2 0 0 2 2 2 0 Ribosomal protein L6e DinI PF06183.13 NODE_52126_length_344_cov_98.372168_g44207_i0forward_frame_3 - 0.1 12.9 0.6 0.22 11.9 0.6 1.7 1 0 0 1 1 1 0 DinI-like family IPK PF03770.16 NODE_52126_length_344_cov_98.372168_g44207_i0forward_frame_2 - 0.058 13.2 0.1 0.069 13.0 0.1 1.0 1 0 0 1 1 1 0 Inositol polyphosphate kinase OmpW PF03922.14 NODE_52118_length_344_cov_123.278317_g44199_i0forward_frame_3 - 0.1 12.5 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 OmpW family TMEM192 PF14802.6 NODE_52113_length_344_cov_192.012945_g44194_i0reverse_frame_2 - 0.021 13.9 1.0 0.025 13.7 1.0 1.1 1 0 0 1 1 1 0 TMEM192 family DUF3481 PF11980.8 NODE_52113_length_344_cov_192.012945_g44194_i0reverse_frame_2 - 0.037 13.7 1.0 0.055 13.2 0.5 1.6 1 1 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein TssO PF17561.2 NODE_52113_length_344_cov_192.012945_g44194_i0reverse_frame_2 - 0.22 11.6 5.8 0.1 12.7 2.2 1.9 1 1 1 2 2 2 0 Type VI secretion system, TssO DUF2678 PF10856.8 NODE_52105_length_344_cov_676.627832_g44187_i0reverse_frame_3 - 0.7 9.8 7.0 0.47 10.4 1.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2678) zf-A20 PF01754.16 NODE_52105_length_344_cov_676.627832_g44187_i0forward_frame_2 - 0.025 14.5 7.9 0.15 12.1 1.0 2.6 2 0 0 2 2 2 0 A20-like zinc finger Calpain_inhib PF00748.19 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_3 - 0.24 11.9 5.2 1.3 9.5 5.2 1.9 1 1 0 1 1 1 0 Calpain inhibitor Med13_C PF06333.12 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_3 - 0.29 10.4 16.7 0.33 10.2 16.7 1.0 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain ASD2 PF08687.11 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_3 - 1.2 8.6 4.4 1.3 8.5 4.4 1.0 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 Guanylate_kin PF00625.21 NODE_52097_length_345_cov_1.332258_g44179_i0reverse_frame_2 - 0.03 14.0 0.1 0.037 13.7 0.1 1.1 1 0 0 1 1 1 0 Guanylate kinase UPF0060 PF02694.15 NODE_52095_length_345_cov_1.493548_g44177_i0reverse_frame_2 - 0.13 12.5 2.5 0.19 12.0 2.5 1.2 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family AnmK PF03702.14 NODE_52095_length_345_cov_1.493548_g44177_i0forward_frame_2 - 0.23 10.5 0.0 0.28 10.3 0.0 1.0 1 0 0 1 1 1 0 Anhydro-N-acetylmuramic acid kinase Peptidase_M3 PF01432.20 NODE_52091_length_345_cov_1.751613_g44173_i0reverse_frame_3 - 4.7e-30 105.2 0.5 5.7e-30 105.0 0.5 1.0 1 0 0 1 1 1 1 Peptidase family M3 UvrA_inter PF17760.1 NODE_52090_length_345_cov_1.790323_g44172_i0reverse_frame_2 - 2.7e-21 75.7 0.2 3.4e-21 75.4 0.2 1.1 1 0 0 1 1 1 1 UvrA interaction domain EAL PF00563.20 NODE_52090_length_345_cov_1.790323_g44172_i0reverse_frame_2 - 0.087 12.3 0.1 0.1 12.1 0.1 1.1 1 0 0 1 1 1 0 EAL domain OTT_1508_deam PF14441.6 NODE_52090_length_345_cov_1.790323_g44172_i0reverse_frame_2 - 0.096 12.7 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 OTT_1508-like deaminase ABC1 PF03109.16 NODE_52089_length_345_cov_1.835484_g44171_i0forward_frame_2 - 5.3e-17 62.1 0.1 8.4e-17 61.4 0.1 1.3 1 0 0 1 1 1 1 ABC1 family LptF_LptG PF03739.14 NODE_52087_length_345_cov_2.000000_g44169_i0forward_frame_2 - 2.2 7.1 4.5 2.5 6.8 4.5 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Fimbrial PF00419.20 NODE_52086_length_345_cov_2.003226_g44168_i0reverse_frame_3 - 3.1e-06 27.5 0.3 0.034 14.4 0.0 2.3 2 1 0 2 2 2 2 Fimbrial protein DUF1202 PF06717.11 NODE_52081_length_345_cov_2.112903_g44163_i0forward_frame_2 - 1.3e-73 248.1 1.2 1.4e-73 248.0 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1202) Lipoprotein_11 PF03260.13 NODE_52081_length_345_cov_2.112903_g44163_i0forward_frame_2 - 0.034 13.5 0.0 0.044 13.2 0.0 1.1 1 0 0 1 1 1 0 Lepidopteran low molecular weight (30 kD) lipoprotein XS PF03468.14 NODE_52081_length_345_cov_2.112903_g44163_i0forward_frame_2 - 0.095 13.0 0.1 0.21 11.9 0.0 1.6 2 0 0 2 2 2 0 XS domain TPR_1 PF00515.28 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_2 - 0.0019 17.9 0.0 0.0031 17.3 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_2 - 0.0039 16.8 0.0 0.0065 16.1 0.0 1.3 1 0 0 1 1 1 1 TPR repeat PDDEXK_3 PF13366.6 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_2 - 0.0058 17.0 0.0 0.0068 16.7 0.0 1.1 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily TPR_2 PF07719.17 NODE_52078_length_345_cov_2.390323_g44160_i0forward_frame_2 - 0.0059 16.6 0.0 0.0099 15.9 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat IF3_N PF05198.16 NODE_52074_length_345_cov_2.641935_g44156_i0forward_frame_2 - 1.9e-31 108.1 0.2 3e-31 107.5 0.2 1.4 1 0 0 1 1 1 1 Translation initiation factor IF-3, N-terminal domain IF3_C PF00707.22 NODE_52074_length_345_cov_2.641935_g44156_i0forward_frame_2 - 1.1e-11 44.5 0.1 2.8e-11 43.2 0.0 1.7 2 0 0 2 2 2 1 Translation initiation factor IF-3, C-terminal domain DUF3632 PF12311.8 NODE_52074_length_345_cov_2.641935_g44156_i0forward_frame_2 - 0.093 13.2 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3632) SH3_16 PF18348.1 NODE_52070_length_345_cov_2.812903_g44152_i0forward_frame_2 - 0.062 13.1 0.0 0.086 12.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial dipeptidyl-peptidase Sh3 domain Prominin PF05478.11 NODE_52069_length_345_cov_2.851613_g44151_i0forward_frame_3 - 8.5 4.2 7.8 9.3 4.1 7.8 1.0 1 0 0 1 1 1 0 Prominin UPF0449 PF15136.6 NODE_52069_length_345_cov_2.851613_g44151_i0forward_frame_2 - 0.056 13.9 0.5 0.072 13.6 0.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 Microcephalin PF12258.8 NODE_52069_length_345_cov_2.851613_g44151_i0forward_frame_2 - 0.63 9.2 4.6 0.7 9.1 4.6 1.0 1 0 0 1 1 1 0 Microcephalin protein QCR10 PF09796.9 NODE_52063_length_345_cov_3.516129_g44145_i0reverse_frame_3 - 0.44 10.7 0.1 0.44 10.7 0.1 1.9 2 0 0 2 2 2 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) Pinin_SDK_memA PF04696.13 NODE_52057_length_345_cov_8.241935_g44139_i0reverse_frame_2 - 0.098 12.7 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region FAM86 PF14904.6 NODE_52057_length_345_cov_8.241935_g44139_i0reverse_frame_2 - 0.13 12.4 1.7 0.21 11.7 0.4 1.8 2 0 0 2 2 2 0 Family of unknown function Phage_integrase PF00589.22 NODE_52056_length_345_cov_8.593548_g44138_i0reverse_frame_2 - 1.8e-24 86.4 0.0 2.1e-24 86.2 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family DUF326 PF03860.16 NODE_52053_length_345_cov_47.303226_g44135_i0reverse_frame_3 - 0.15 12.1 6.5 0.33 11.0 6.5 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF326) TTL PF03133.15 NODE_52053_length_345_cov_47.303226_g44135_i0reverse_frame_2 - 9.5e-21 74.2 0.0 1.1e-20 73.9 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_52053_length_345_cov_47.303226_g44135_i0reverse_frame_2 - 7.4e-05 22.1 0.0 9.9e-05 21.7 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_52053_length_345_cov_47.303226_g44135_i0reverse_frame_2 - 0.00091 18.6 0.0 0.0011 18.3 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp DUF2054 PF10218.9 NODE_52053_length_345_cov_47.303226_g44135_i0forward_frame_2 - 0.0041 17.2 3.5 0.0048 17.0 3.5 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2054) Rep_4 PF05797.11 NODE_52049_length_345_cov_55.451613_g44131_i0reverse_frame_3 - 0.096 11.8 0.3 0.11 11.6 0.3 1.1 1 0 0 1 1 1 0 Yeast trans-acting factor (REP1/REP2) TPR_12 PF13424.6 NODE_52049_length_345_cov_55.451613_g44131_i0forward_frame_2 - 4.1e-06 27.0 0.0 0.00018 21.7 0.0 1.7 1 1 1 2 2 2 2 Tetratricopeptide repeat DUF4256 PF14066.6 NODE_52049_length_345_cov_55.451613_g44131_i0forward_frame_2 - 0.13 12.0 0.4 0.2 11.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4256) Polyketide_cyc2 PF10604.9 NODE_52048_length_345_cov_59.296774_g44130_i0reverse_frame_2 - 5.5e-06 26.7 0.0 6.4e-06 26.5 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF3278 PF11683.8 NODE_52045_length_345_cov_66.996774_g44127_i0forward_frame_3 - 0.14 12.2 0.1 0.18 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3278) DUF5571 PF17732.1 NODE_52043_length_345_cov_69.996774_g44125_i0forward_frame_2 - 0.15 11.5 0.1 0.17 11.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5571) Smr PF01713.21 NODE_52042_length_345_cov_70.332258_g44124_i0forward_frame_2 - 0.0017 18.6 0.0 0.0022 18.3 0.0 1.2 1 0 0 1 1 1 1 Smr domain HSP70 PF00012.20 NODE_52039_length_345_cov_74.780645_g44121_i0reverse_frame_2 - 1.2e-36 126.1 1.6 1.3e-36 126.0 1.6 1.0 1 0 0 1 1 1 1 Hsp70 protein NAD-GH PF10712.9 NODE_52039_length_345_cov_74.780645_g44121_i0forward_frame_3 - 7.6e-22 77.5 1.3 9.3e-22 77.2 1.3 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase EpmC PF04315.12 NODE_52038_length_345_cov_74.958065_g44120_i0forward_frame_3 - 0.21 11.3 0.0 0.31 10.7 0.0 1.2 1 0 0 1 1 1 0 Elongation factor P hydroxylase Acetyltransf_6 PF13480.7 NODE_52036_length_345_cov_77.574194_g44118_i0reverse_frame_3 - 0.031 14.5 0.1 0.035 14.3 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain 3HCDH PF00725.22 NODE_52035_length_345_cov_80.580645_g44117_i0forward_frame_3 - 7.5e-13 48.9 0.0 1.2e-12 48.3 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Beta-TrCP_D PF12125.8 NODE_52034_length_345_cov_83.632258_g44116_i0forward_frame_3 - 0.0099 15.8 0.4 0.019 14.9 0.4 1.4 1 0 0 1 1 1 1 D domain of beta-TrCP MgtE PF01769.16 NODE_52033_length_345_cov_90.516129_g44115_i0reverse_frame_2 - 0.0041 17.5 0.8 0.0047 17.3 0.8 1.1 1 0 0 1 1 1 1 Divalent cation transporter CSD PF00313.22 NODE_52030_length_345_cov_108.929032_g44112_i0reverse_frame_3 - 2.4e-08 33.7 1.1 3.3e-08 33.3 1.1 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain Ribosomal_L33 PF00471.20 NODE_52028_length_345_cov_110.525806_g44110_i0forward_frame_2 - 7.9e-08 32.6 0.0 1.7e-07 31.6 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L33 SDH_C PF18317.1 NODE_52028_length_345_cov_110.525806_g44110_i0forward_frame_2 - 0.18 11.6 0.8 3.7 7.4 0.0 2.3 2 0 0 2 2 2 0 Shikimate 5'-dehydrogenase C-terminal domain DUF1418 PF07214.12 NODE_52016_length_345_cov_975.754839_g39796_i1reverse_frame_2 - 0.018 14.9 0.8 0.025 14.4 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) C_Hendra PF16821.5 ORF99787 - 0.0086 16.0 5.2 0.011 15.6 5.2 1.3 1 1 0 1 1 1 1 C protein from hendra and measles viruses MipZ PF09140.11 ORF99323 - 0.013 14.8 0.7 0.016 14.5 0.7 1.1 1 0 0 1 1 1 0 ATPase MipZ MRP-S24 PF14955.6 ORF9883 - 0.9 9.5 4.7 1 9.3 0.1 2.2 1 1 1 2 2 2 0 Mitochondrial ribosome subunit S24 Arf PF00025.21 ORF97914 - 3e-45 153.8 0.1 3.3e-45 153.7 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 ORF97914 - 8.7e-06 25.4 0.0 9.1e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF97914 - 0.00023 20.6 0.0 0.00025 20.5 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF97914 - 0.00029 21.0 0.0 0.00039 20.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 ORF97914 - 0.0016 17.7 0.0 0.003 16.8 0.0 1.4 1 1 0 1 1 1 1 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF97914 - 0.021 14.2 0.0 0.022 14.1 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF3694 PF12473.8 ORF96195 - 0.083 13.5 2.1 0.093 13.4 2.1 1.0 1 0 0 1 1 1 0 Kinesin protein IL2RB_N1 PF18707.1 ORF95983 - 0.037 14.6 0.2 0.037 14.6 0.2 1.5 2 0 0 2 2 2 0 Interleukin-2 receptor subunit beta N-terminal domain 1 Ribosomal_60s PF00428.19 ORF95024 - 1.5e-19 70.4 4.4 1.7e-19 70.2 4.4 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein zf-CCCH PF00642.24 ORF94787 - 3.4 7.7 6.2 0.9 9.5 0.9 2.7 3 0 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) TetR_C_20 PF17925.1 ORF92211 - 0.12 12.7 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Spec3 PF15795.5 ORF91461 - 6.8e-12 45.8 22.0 7.4e-10 39.2 22.0 2.1 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein BioT2 PF15368.6 ORF91357 - 0.041 13.8 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Spermatogenesis family BioT2 DUF1506 PF07405.11 ORF89408 - 0.02 15.0 0.1 0.022 14.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1506) HCV_NS1 PF01560.17 ORF89139 - 0.0035 16.1 0.0 0.0041 15.9 0.0 1.1 1 0 0 1 1 1 1 Hepatitis C virus non-structural protein E2/NS1 Ribosomal_L27A PF00828.19 ORF88502 - 9.3e-17 61.9 0.0 1e-16 61.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FdhD-NarQ PF02634.15 ORF8811 - 0.083 12.6 0.9 0.15 11.7 0.6 1.6 1 1 0 1 1 1 0 FdhD/NarQ family DUF4886 PF16227.5 ORF87493 - 4.5e-06 26.0 0.0 5.2e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4886) YkuD_2 PF13645.6 ORF86024 - 0.049 13.1 0.0 0.063 12.7 0.0 1.1 1 0 0 1 1 1 0 L,D-transpeptidase catalytic domain TBCA PF02970.16 ORF84846 - 2.6e-22 78.9 3.6 3.4e-22 78.6 3.6 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A DUF4298 PF14131.6 ORF84846 - 0.021 14.8 0.7 0.086 12.8 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) ApoL PF05461.11 ORF84846 - 0.024 14.0 0.3 0.024 14.0 0.3 1.1 1 0 0 1 1 1 0 Apolipoprotein L RasGAP_C PF03836.15 ORF84846 - 0.024 14.8 4.2 0.22 11.6 0.7 2.1 1 1 1 2 2 2 0 RasGAP C-terminus T3SchapCesA PF11439.8 ORF84846 - 0.16 12.1 2.5 5.7 7.1 0.2 2.0 1 1 1 2 2 2 0 Type III secretion system filament chaperone CesA BCNT PF07572.12 ORF84846 - 0.26 11.4 1.7 0.25 11.4 0.4 1.6 2 0 0 2 2 2 0 Bucentaur or craniofacial development Myb_DNA-binding PF00249.31 ORF84717 - 3.9e-11 42.9 0.1 6.5e-11 42.3 0.1 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF84717 - 0.0002 21.6 1.3 0.0017 18.6 0.2 2.6 2 1 1 3 3 3 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF84717 - 0.053 13.4 0.0 0.08 12.8 0.0 1.3 1 0 0 1 1 1 0 Myb DNA-binding like DUF4085 PF13315.6 ORF84717 - 0.1 12.2 0.1 0.11 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4085) PK_C PF02887.16 ORF83379 - 3e-29 101.6 0.3 3.3e-29 101.5 0.3 1.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain DUF5637 PF18687.1 ORF82783 - 0.047 13.7 0.5 0.075 13.0 0.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5637) RuBisCO_large_N PF02788.16 ORF82415 - 0.18 12.0 0.9 0.27 11.4 0.9 1.5 1 1 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, N-terminal domain Ras PF00071.22 ORF81059 - 7.5e-08 32.1 0.1 9.7e-08 31.8 0.1 1.2 1 0 0 1 1 1 1 Ras family NUDIX_4 PF14815.6 ORF80171 - 0.098 12.7 0.7 0.098 12.7 0.7 1.6 2 0 0 2 2 2 0 NUDIX domain Spec3 PF15795.5 ORF80065 - 8.8e-14 51.8 20.4 9.5e-12 45.3 20.4 2.1 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein Toxin_5 PF05294.13 ORF80065 - 0.072 13.5 0.5 0.11 12.9 0.5 1.2 1 0 0 1 1 1 0 Scorpion short toxin Phage_holin_Dp1 PF16938.5 ORF80065 - 0.11 12.7 0.7 0.16 12.2 0.7 1.2 1 0 0 1 1 1 0 Putative phage holin Dp-1 Sirohm_synth_M PF14824.6 ORF79521 - 2.5 7.6 5.2 0.25 10.9 1.0 1.5 2 0 0 2 2 2 0 Sirohaem biosynthesis protein central Activin_recp PF01064.23 ORF78540 - 0.034 15.3 1.2 5 8.3 0.5 2.1 2 0 0 2 2 2 0 Activin types I and II receptor domain DUF883 PF05957.13 ORF78491 - 0.11 13.1 0.0 0.18 12.4 0.0 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) FlgM PF04316.13 ORF78400 - 2.3e-09 37.5 0.2 3.9e-09 36.7 0.2 1.5 1 1 0 1 1 1 1 Anti-sigma-28 factor, FlgM BRE1 PF08647.11 ORF78304 - 2.2e-05 24.4 5.1 2.8e-05 24.1 5.1 1.2 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase DUF3450 PF11932.8 ORF78304 - 7.9e-05 22.1 5.7 9.3e-05 21.8 5.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Spc7 PF08317.11 ORF78304 - 0.00025 20.0 3.6 0.00028 19.9 3.6 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 ORF78304 - 0.001 19.6 6.6 0.0013 19.2 6.6 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region FmiP_Thoc5 PF09766.9 ORF78304 - 0.0018 17.6 1.5 0.0024 17.3 1.5 1.2 1 0 0 1 1 1 1 Fms-interacting protein/Thoc5 Tropomyosin PF00261.20 ORF78304 - 0.0033 16.9 4.8 0.0042 16.5 4.8 1.1 1 0 0 1 1 1 1 Tropomyosin Atg14 PF10186.9 ORF78304 - 0.0034 16.5 1.0 0.0037 16.4 1.0 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4164 PF13747.6 ORF78304 - 0.0035 17.6 4.9 0.0045 17.2 4.4 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) Seryl_tRNA_N PF02403.22 ORF78304 - 0.0054 16.9 6.4 0.0074 16.5 6.4 1.1 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain FapA PF03961.13 ORF78304 - 0.0062 15.2 2.8 0.0066 15.1 2.8 1.1 1 0 0 1 1 1 1 Flagellar Assembly Protein A IFT57 PF10498.9 ORF78304 - 0.0072 15.3 3.0 0.0076 15.3 3.0 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Muted PF14942.6 ORF78304 - 0.0093 16.3 4.7 0.012 16.0 4.7 1.1 1 0 0 1 1 1 1 Organelle biogenesis, Muted-like protein TMF_TATA_bd PF12325.8 ORF78304 - 0.01 16.1 6.2 0.013 15.8 6.2 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Tropomyosin_1 PF12718.7 ORF78304 - 0.011 15.9 4.8 0.014 15.5 4.8 1.1 1 0 0 1 1 1 0 Tropomyosin like DUF3782 PF12644.7 ORF78304 - 0.014 15.5 1.7 0.025 14.7 1.3 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3782) CEP209_CC5 PF16574.5 ORF78304 - 0.018 15.2 3.6 0.023 14.8 3.6 1.3 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 FemAB PF02388.16 ORF78304 - 0.022 13.7 2.0 0.026 13.4 2.0 1.1 1 0 0 1 1 1 0 FemAB family JIP_LZII PF16471.5 ORF78304 - 0.022 14.9 4.7 0.022 14.9 4.7 1.9 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II COG2 PF06148.11 ORF78304 - 0.023 14.8 1.1 0.033 14.3 1.1 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DASH_Dad1 PF08649.10 ORF78304 - 0.027 14.6 3.6 0.033 14.4 0.6 2.6 1 1 2 3 3 3 0 DASH complex subunit Dad1 HemX PF04375.14 ORF78304 - 0.033 13.5 2.7 0.04 13.2 2.7 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF1664 PF07889.12 ORF78304 - 0.046 13.8 4.2 1.3 9.1 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) MogR_DNAbind PF12181.8 ORF78304 - 0.048 13.6 4.6 0.06 13.2 4.6 1.0 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) DUF4140 PF13600.6 ORF78304 - 0.057 13.9 1.5 0.081 13.4 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) TMPIT PF07851.13 ORF78304 - 0.089 12.0 3.6 0.1 11.8 3.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein PI3K_P85_iSH2 PF16454.5 ORF78304 - 0.093 12.3 7.3 0.15 11.7 5.9 1.7 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain NPV_P10 PF05531.12 ORF78304 - 0.096 13.2 4.6 0.16 12.5 4.6 1.4 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein THOC7 PF05615.13 ORF78304 - 0.14 12.5 7.7 0.27 11.5 7.7 1.6 1 1 0 1 1 1 0 Tho complex subunit 7 ABC_tran_CTD PF16326.5 ORF78304 - 0.15 12.3 8.7 0.19 12.0 8.1 1.5 1 1 0 1 1 1 0 ABC transporter C-terminal domain CLZ PF16526.5 ORF78304 - 0.2 12.1 5.1 0.7 10.3 2.9 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels PI_PP_I PF18363.1 ORF78304 - 0.21 11.8 2.3 2.9 8.1 2.3 2.0 1 1 0 1 1 1 0 Phosphoinositide phosphatase insertion domain DHR10 PF18595.1 ORF78304 - 0.3 11.2 10.0 0.29 11.2 8.9 1.6 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Syntaxin-6_N PF09177.11 ORF78304 - 0.32 11.6 4.2 0.81 10.3 4.2 1.8 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Prefoldin PF02996.17 ORF78304 - 0.33 10.9 8.3 0.67 9.9 4.0 2.2 1 1 1 2 2 2 0 Prefoldin subunit Spc24 PF08286.11 ORF78304 - 0.56 10.5 7.8 1.9 8.7 7.8 1.8 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF4199 PF13858.6 ORF78304 - 9.6 6.6 6.7 18 5.7 6.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) UCH_1 PF13423.6 ORF77287 - 0.17 11.4 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase tRNA-synt_2 PF00152.20 ORF759 - 1.8e-18 66.7 0.0 2.3e-18 66.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) YcbB PF08664.10 ORF75702 - 0.12 12.5 1.2 6.9 6.7 0.0 2.1 1 1 1 2 2 2 0 YcbB domain Ribosomal_L27A PF00828.19 ORF75558 - 9.3e-17 61.9 0.0 1e-16 61.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CnrY PF17524.2 ORF75325 - 0.3 11.3 1.4 0.98 9.7 1.4 1.7 1 1 0 1 1 1 0 Anti-sigma factor CnrY Katanin_con80 PF13925.6 ORF7441 - 0.053 13.6 1.6 0.075 13.1 1.6 1.2 1 0 0 1 1 1 0 con80 domain of Katanin Atg14 PF10186.9 ORF7441 - 0.15 11.1 7.7 0.2 10.7 7.7 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CCDC-167 PF15188.6 ORF7441 - 0.99 9.8 7.1 1.2 9.5 0.0 2.4 1 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 MAGI_u1 PF16663.5 ORF72391 - 0.035 14.2 0.2 0.12 12.5 0.2 1.9 1 1 0 1 1 1 0 Unstructured region on MAGI Pkinase PF00069.25 ORF7214 - 3.2e-05 23.4 0.5 4.3e-05 23.0 0.5 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7214 - 0.0011 18.3 0.3 0.0015 17.9 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase GlutR_dimer PF00745.20 ORF71420 - 0.037 14.5 0.8 0.059 13.8 0.6 1.5 1 1 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain IZUMO PF15005.6 ORF71420 - 0.23 12.0 2.7 0.28 11.7 2.7 1.2 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DUF4199 PF13858.6 ORF71420 - 1.3 9.4 2.7 1.2 9.5 1.4 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) ATP-synt_J PF04911.12 ORF70743 - 0.0042 16.6 0.0 0.19 11.3 0.0 2.4 1 1 0 1 1 1 1 ATP synthase j chain Fer4_9 PF13187.6 ORF69307 - 0.017 15.3 3.1 0.017 15.3 3.1 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain AAA_24 PF13479.6 ORF6896 - 0.044 13.5 0.4 0.051 13.3 0.4 1.0 1 0 0 1 1 1 0 AAA domain Nop10p PF04135.12 ORF67804 - 0.034 14.2 3.2 0.063 13.3 2.5 1.9 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family DUF983 PF06170.12 ORF66588 - 0.0099 16.3 9.2 30 5.1 0.1 4.7 1 1 4 5 5 5 0 Protein of unknown function (DUF983) zf-RING_7 PF02591.15 ORF66588 - 0.037 14.2 14.1 2 8.7 0.1 4.6 5 0 0 5 5 5 0 C4-type zinc ribbon domain C1_1 PF00130.22 ORF66588 - 0.45 10.4 7.8 1.2 9.0 0.3 3.3 1 1 3 4 4 4 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Cas_CXXC_CXXC PF09706.10 ORF66588 - 0.72 10.1 8.8 24 5.3 0.0 4.5 1 1 4 5 5 5 0 CRISPR-associated protein (Cas_CXXC_CXXC) DHODB_Fe-S_bind PF10418.9 ORF66588 - 1.1 9.2 11.4 19 5.2 1.5 4.3 3 2 2 5 5 5 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DUF3136 PF11334.8 ORF66588 - 1.4 8.8 6.1 14 5.6 0.2 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF3136) zf-trcl PF13451.6 ORF66588 - 3.1 7.7 22.8 20 5.2 0.3 5.0 3 1 2 5 5 5 0 Probable zinc-ribbon domain RINGv PF12906.7 ORF66588 - 8.8 6.5 11.4 73 3.6 0.1 4.1 2 1 2 4 4 4 0 RING-variant domain zf-LITAF-like PF10601.9 ORF65266 - 0.017 15.4 1.5 0.033 14.5 1.5 1.5 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain ThiS PF02597.20 ORF65032 - 4.7e-22 78.4 0.0 5.7e-22 78.1 0.0 1.1 1 0 0 1 1 1 1 ThiS family TGS PF02824.21 ORF65032 - 0.089 12.9 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 TGS domain DUF4043 PF13252.6 ORF6476 - 0.044 12.9 0.6 0.05 12.7 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4043) Prok-E2_D PF14460.6 ORF6476 - 0.062 13.0 0.4 0.18 11.5 0.0 1.8 1 1 1 2 2 2 0 Prokaryotic E2 family D AAA_24 PF13479.6 ORF63609 - 0.044 13.5 0.4 0.051 13.3 0.4 1.0 1 0 0 1 1 1 0 AAA domain EMI PF07546.13 ORF62973 - 1.9 9.3 8.9 9.5 7.1 8.9 2.2 1 1 0 1 1 1 0 EMI domain LepB_N PF18640.1 ORF62549 - 0.032 13.9 1.5 0.047 13.3 1.5 1.3 1 0 0 1 1 1 0 LepB N-terminal domain Mycobact_memb PF05423.13 ORF60062 - 0.16 11.9 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Mycobacterium membrane protein DUF2407_C PF13373.6 ORF59823 - 0.24 11.6 0.0 0.32 11.2 0.0 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain CwfJ_C_1 PF04677.15 ORF59792 - 0.22 11.4 3.1 3.2 7.6 1.5 2.1 1 1 1 2 2 2 0 Protein similar to CwfJ C-terminus 1 tRNA-synt_1_2 PF13603.6 ORF57871 - 0.011 15.3 0.7 0.016 14.8 0.7 1.2 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 Mid1 PF12929.7 ORF56312 - 0.023 13.9 0.2 0.028 13.6 0.2 1.1 1 0 0 1 1 1 0 Stretch-activated Ca2+-permeable channel component Glycos_transf_1 PF00534.20 ORF5572 - 0.086 12.4 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 PEX-2N PF09263.10 ORF53471 - 0.049 13.9 0.5 0.15 12.4 0.1 1.8 2 0 0 2 2 2 0 Peroxisome biogenesis factor 1, N-terminal Calpain_III PF01067.22 ORF52381 - 0.023 15.0 0.0 0.031 14.5 0.0 1.4 1 1 0 1 1 1 0 Calpain large subunit, domain III LRRNT PF01462.18 ORF52381 - 1 9.1 7.8 3.8 7.3 7.8 2.0 1 1 0 1 1 1 0 Leucine rich repeat N-terminal domain zf-RING_UBOX PF13445.6 ORF52203 - 4e-07 30.0 0.6 6e-07 29.4 0.2 1.5 1 1 0 1 1 1 1 RING-type zinc-finger Rtf2 PF04641.12 ORF52203 - 7.4e-05 22.2 0.1 7.8e-05 22.2 0.1 1.1 1 0 0 1 1 1 1 Rtf2 RING-finger zf-RING_5 PF14634.6 ORF52203 - 0.00085 19.2 1.0 0.0014 18.6 1.0 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF52203 - 0.0018 18.5 1.6 0.0047 17.2 1.6 1.7 1 1 1 2 2 2 2 Ring finger domain zf-C3HC4 PF00097.25 ORF52203 - 0.067 13.1 2.3 0.11 12.3 2.3 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF52203 - 0.56 10.1 4.8 1.7 8.5 4.9 1.8 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF52203 - 2.2 8.2 6.7 13 5.8 6.7 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) EamA PF00892.20 ORF51945 - 0.00059 20.0 4.8 0.00064 19.9 4.8 1.0 1 0 0 1 1 1 1 EamA-like transporter family EF-hand_1 PF00036.32 ORF5151 - 0.085 12.4 1.4 2.7 7.7 0.1 2.8 3 0 0 3 3 3 0 EF hand DUF3811 PF11656.8 ORF50909 - 1.7e-39 134.1 5.5 2.1e-39 133.8 5.5 1.1 1 0 0 1 1 1 1 YjbD family (DUF3811) Ribosomal_S17e PF00833.18 ORF49331 - 0.029 14.3 0.1 0.064 13.2 0.1 1.5 1 1 1 2 2 2 0 Ribosomal S17 DUF3916 PF13079.6 ORF49331 - 0.057 13.3 0.6 0.068 13.1 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) Chal_sti_synt_N PF00195.19 ORF49254 - 0.13 11.7 0.9 0.15 11.5 0.9 1.1 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain MORN PF02493.20 ORF49107 - 2.6e-15 55.3 10.8 1.1e-06 28.2 1.2 3.8 4 0 0 4 4 4 3 MORN repeat dCMP_cyt_deam_1 PF00383.23 ORF48914 - 0.047 13.6 0.0 0.047 13.6 0.0 1.2 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region MBD_C PF14048.6 ORF48864 - 0.048 14.4 0.0 0.064 14.0 0.0 1.2 1 0 0 1 1 1 0 C-terminal domain of methyl-CpG binding protein 2 and 3 DUF983 PF06170.12 ORF48522 - 0.0099 16.3 9.2 30 5.1 0.1 4.7 1 1 4 5 5 5 0 Protein of unknown function (DUF983) zf-RING_7 PF02591.15 ORF48522 - 0.037 14.2 14.1 2 8.7 0.1 4.6 5 0 0 5 5 5 0 C4-type zinc ribbon domain C1_1 PF00130.22 ORF48522 - 0.45 10.4 7.8 1.2 9.0 0.3 3.3 1 1 3 4 4 4 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Cas_CXXC_CXXC PF09706.10 ORF48522 - 0.72 10.1 8.8 24 5.3 0.0 4.5 1 1 4 5 5 5 0 CRISPR-associated protein (Cas_CXXC_CXXC) DHODB_Fe-S_bind PF10418.9 ORF48522 - 1.1 9.2 11.4 19 5.2 1.5 4.3 3 2 2 5 5 5 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DUF3136 PF11334.8 ORF48522 - 1.4 8.8 6.1 14 5.6 0.2 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF3136) zf-trcl PF13451.6 ORF48522 - 3.1 7.7 22.8 20 5.2 0.3 5.0 3 1 2 5 5 5 0 Probable zinc-ribbon domain RINGv PF12906.7 ORF48522 - 8.8 6.5 11.4 73 3.6 0.1 4.1 2 1 2 4 4 4 0 RING-variant domain TBCA PF02970.16 ORF48392 - 6.9e-23 80.8 10.4 8.8e-23 80.5 10.4 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A DUF4298 PF14131.6 ORF48392 - 0.0022 17.9 3.3 0.058 13.4 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4298) Coagulase PF08764.10 ORF48392 - 0.0029 17.9 6.8 0.0029 17.9 6.8 1.0 1 0 0 1 1 1 1 Staphylococcus aureus coagulase DHR10 PF18595.1 ORF48392 - 0.0088 16.1 8.7 0.03 14.4 8.7 1.7 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain COG7 PF10191.9 ORF48392 - 0.011 14.0 0.7 0.012 13.9 0.7 1.0 1 0 0 1 1 1 0 Golgi complex component 7 (COG7) Sec34 PF04136.15 ORF48392 - 0.015 15.2 2.1 0.019 14.9 2.1 1.2 1 0 0 1 1 1 0 Sec34-like family NPV_P10 PF05531.12 ORF48392 - 0.02 15.3 2.0 0.036 14.5 1.9 1.6 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein HMA PF00403.26 ORF48392 - 0.026 15.0 2.7 0.47 10.9 0.0 2.5 2 1 0 2 2 2 0 Heavy-metal-associated domain Carboxyl_trans PF01039.22 ORF48392 - 0.038 12.6 0.2 0.042 12.5 0.2 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain eIF-4B PF06273.11 ORF48392 - 0.041 12.9 5.3 0.045 12.8 5.3 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B BLOC1_2 PF10046.9 ORF48392 - 0.062 13.6 6.6 0.073 13.4 5.8 1.6 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FapA PF03961.13 ORF48392 - 0.064 11.9 7.4 0.073 11.7 7.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Peptidase_C34 PF05413.11 ORF48392 - 0.07 13.4 0.2 0.13 12.6 0.1 1.5 1 1 1 2 2 2 0 Putative closterovirus papain-like endopeptidase DivIC PF04977.15 ORF48392 - 0.1 12.4 3.7 0.8 9.5 0.8 2.2 1 1 1 2 2 2 0 Septum formation initiator MapZ_EC1 PF18041.1 ORF48392 - 0.19 12.0 6.0 0.83 9.9 3.6 2.1 2 0 0 2 2 2 0 MapZ extracellular domain 1 APG6_N PF17675.1 ORF48392 - 0.19 12.2 10.8 0.26 11.8 10.8 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF48392 - 0.27 11.7 9.7 3.1 8.3 4.1 2.2 1 1 1 2 2 2 0 Cell division protein ZapB TMPIT PF07851.13 ORF48392 - 0.28 10.4 2.7 0.31 10.2 2.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Nup88 PF10168.9 ORF48392 - 0.79 7.5 7.1 0.83 7.4 7.1 1.0 1 0 0 1 1 1 0 Nuclear pore component PCRF PF03462.18 ORF48392 - 1.6 8.6 7.4 2.1 8.2 7.4 1.4 1 1 0 1 1 1 0 PCRF domain bZIP_1 PF00170.21 ORF48392 - 2.1 8.5 7.8 1.2 9.3 5.0 1.9 1 1 1 2 2 2 0 bZIP transcription factor Pkinase PF00069.25 ORF46363 - 1.2e-16 60.9 0.0 1.3e-16 60.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46363 - 2.5e-06 27.0 0.0 3e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF46363 - 0.0024 17.3 0.0 0.0027 17.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Lsm_C PF14894.6 ORF46217 - 0.073 12.9 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Lsm C-terminal DUF4687 PF15747.5 ORF45552 - 0.11 12.9 5.5 0.47 11.0 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4687) DUF3678 PF12435.8 ORF4500 - 1.6 8.2 7.1 0.16 11.4 1.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) DUF4687 PF15747.5 ORF44345 - 0.11 12.9 5.5 0.47 11.0 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4687) SPC12 PF06645.13 ORF43073 - 2.4e-22 78.8 4.1 3e-22 78.5 4.1 1.1 1 0 0 1 1 1 1 Microsomal signal peptidase 12 kDa subunit (SPC12) Ribonuc_red_lgC PF02867.15 ORF42747 - 0.57 8.7 2.6 0.59 8.6 2.6 1.1 1 0 0 1 1 1 0 Ribonucleotide reductase, barrel domain NUDIX_4 PF14815.6 ORF41506 - 0.098 12.7 0.7 0.098 12.7 0.7 1.6 2 0 0 2 2 2 0 NUDIX domain Mito_carr PF00153.27 ORF39385 - 1.3e-10 41.1 0.3 1.6e-10 40.7 0.3 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein FlhD PF05247.13 ORF39385 - 0.082 13.2 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) FtsH_ext PF06480.15 ORF39105 - 7.5 7.0 6.4 1.1 9.6 2.4 1.7 2 0 0 2 2 2 0 FtsH Extracellular TBCA PF02970.16 ORF38806 - 6.9e-23 80.8 10.4 8.8e-23 80.5 10.4 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A DUF4298 PF14131.6 ORF38806 - 0.0022 17.9 3.3 0.058 13.4 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4298) Coagulase PF08764.10 ORF38806 - 0.0029 17.9 6.8 0.0029 17.9 6.8 1.0 1 0 0 1 1 1 1 Staphylococcus aureus coagulase DHR10 PF18595.1 ORF38806 - 0.0088 16.1 8.7 0.03 14.4 8.7 1.7 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain COG7 PF10191.9 ORF38806 - 0.011 14.0 0.7 0.012 13.9 0.7 1.0 1 0 0 1 1 1 0 Golgi complex component 7 (COG7) Sec34 PF04136.15 ORF38806 - 0.015 15.2 2.1 0.019 14.9 2.1 1.2 1 0 0 1 1 1 0 Sec34-like family NPV_P10 PF05531.12 ORF38806 - 0.02 15.3 2.0 0.036 14.5 1.9 1.6 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein HMA PF00403.26 ORF38806 - 0.026 15.0 2.7 0.47 10.9 0.0 2.5 2 1 0 2 2 2 0 Heavy-metal-associated domain Carboxyl_trans PF01039.22 ORF38806 - 0.038 12.6 0.2 0.042 12.5 0.2 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain eIF-4B PF06273.11 ORF38806 - 0.041 12.9 5.3 0.045 12.8 5.3 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B BLOC1_2 PF10046.9 ORF38806 - 0.062 13.6 6.6 0.073 13.4 5.8 1.6 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FapA PF03961.13 ORF38806 - 0.064 11.9 7.4 0.073 11.7 7.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Peptidase_C34 PF05413.11 ORF38806 - 0.07 13.4 0.2 0.13 12.6 0.1 1.5 1 1 1 2 2 2 0 Putative closterovirus papain-like endopeptidase DivIC PF04977.15 ORF38806 - 0.1 12.4 3.7 0.8 9.5 0.8 2.2 1 1 1 2 2 2 0 Septum formation initiator MapZ_EC1 PF18041.1 ORF38806 - 0.19 12.0 6.0 0.83 9.9 3.6 2.1 2 0 0 2 2 2 0 MapZ extracellular domain 1 APG6_N PF17675.1 ORF38806 - 0.19 12.2 10.8 0.26 11.8 10.8 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF38806 - 0.27 11.7 9.7 3.1 8.3 4.1 2.2 1 1 1 2 2 2 0 Cell division protein ZapB TMPIT PF07851.13 ORF38806 - 0.28 10.4 2.7 0.31 10.2 2.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Nup88 PF10168.9 ORF38806 - 0.79 7.5 7.1 0.83 7.4 7.1 1.0 1 0 0 1 1 1 0 Nuclear pore component PCRF PF03462.18 ORF38806 - 1.6 8.6 7.4 2.1 8.2 7.4 1.4 1 1 0 1 1 1 0 PCRF domain bZIP_1 PF00170.21 ORF38806 - 2.1 8.5 7.8 1.2 9.3 5.0 1.9 1 1 1 2 2 2 0 bZIP transcription factor ABA_WDS PF02496.16 ORF36834 - 4.6e-07 30.2 4.7 0.002 18.6 0.1 2.6 1 1 1 2 2 2 2 ABA/WDS induced protein zf-RING_5 PF14634.6 ORF35234 - 0.028 14.4 0.2 0.1 12.6 0.0 1.9 2 0 0 2 2 2 0 zinc-RING finger domain Pkinase PF00069.25 ORF33928 - 1.3e-11 44.4 0.1 1.4e-10 41.0 0.1 2.0 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33928 - 0.001 18.4 0.1 0.0029 16.9 0.1 1.7 1 1 0 1 1 1 1 Protein tyrosine kinase FSA_C PF10479.9 ORF32866 - 4.9 5.2 6.4 4.9 5.2 6.4 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Copine PF07002.16 ORF32236 - 3.7e-24 85.4 0.0 4e-24 85.3 0.0 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF32236 - 0.0001 22.5 0.0 0.0001 22.5 0.0 1.1 1 0 0 1 1 1 1 vWA found in TerF C terminus NADH_dh_m_C1 PF15088.6 ORF3080 - 0.0055 16.3 0.0 0.0088 15.6 0.0 1.3 1 0 0 1 1 1 1 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial Pho86 PF11124.8 ORF30701 - 0.0083 15.6 1.2 0.0095 15.4 1.2 1.1 1 0 0 1 1 1 1 Inorganic phosphate transporter Pho86 DUF3641 PF12345.8 ORF30367 - 0.1 12.6 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3641) CD20 PF04103.15 ORF30338 - 0.013 15.6 0.1 0.02 15.0 0.1 1.4 1 1 0 1 1 1 0 CD20-like family NicO PF03824.16 ORF30338 - 0.021 14.2 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 High-affinity nickel-transport protein DUF588 PF04535.12 ORF30338 - 0.038 13.8 0.1 0.049 13.4 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF588) Frizzled PF01534.17 ORF30338 - 0.043 12.9 0.0 0.048 12.7 0.0 1.0 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region ATP-synt_C PF00137.21 ORF30338 - 0.063 13.6 1.4 0.096 13.0 1.4 1.3 1 0 0 1 1 1 0 ATP synthase subunit C Protocadherin PF08374.11 ORF30338 - 0.09 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Protocadherin Vpu PF00558.19 ORF30338 - 0.094 12.5 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Vpu protein VPS9 PF02204.18 ORF30338 - 0.095 12.9 0.2 0.13 12.5 0.2 1.2 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain SIT PF15330.6 ORF30338 - 0.1 13.0 0.1 0.14 12.6 0.1 1.1 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT RhoGEF67_u1 PF16615.5 ORF30041 - 0.0058 17.1 0.5 0.0058 17.1 0.5 2.1 3 0 0 3 3 3 1 Unstructured region one on RhoGEF 6 and 7 Glycoprotein_G PF00802.19 ORF29207 - 0.98 8.7 5.3 1.1 8.5 5.3 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Perm-CXXC PF15629.6 ORF28599 - 0.63 10.4 5.8 3.2 8.1 2.1 2.3 2 0 0 2 2 2 0 Permuted single zf-CXXC unit Orthopox_A5L PF06193.11 ORF28364 - 0.25 10.8 2.4 0.28 10.6 2.4 1.1 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like DUF148 PF02520.17 ORF27527 - 0.0021 18.1 15.3 0.0021 18.1 15.3 1.4 1 1 0 1 1 1 1 Domain of unknown function DUF148 Rotamase_2 PF13145.6 ORF27527 - 0.011 16.5 5.3 0.013 16.3 5.3 1.1 1 0 0 1 1 1 0 PPIC-type PPIASE domain Lipase_chap PF03280.14 ORF27527 - 0.17 11.8 0.4 0.17 11.8 0.4 2.1 1 1 1 2 2 2 0 Proteobacterial lipase chaperone protein Rootletin PF15035.6 ORF27527 - 0.59 10.1 17.2 0.29 11.1 15.0 1.5 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion PDDEXK_6 PF04720.12 ORF27527 - 3.6 7.5 12.3 4.1 7.3 12.3 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function TMPIT PF07851.13 ORF27527 - 6.9 5.8 15.6 8.2 5.6 15.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein Frag1 PF10277.9 ORF27440 - 0.004 16.7 4.9 0.0048 16.5 4.9 1.2 1 0 0 1 1 1 1 Frag1/DRAM/Sfk1 family DUF998 PF06197.13 ORF27440 - 0.049 13.2 2.8 0.055 13.1 2.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF998) zf-RING_2 PF13639.6 ORF26284 - 6e-13 48.9 7.1 1e-12 48.2 7.1 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF26284 - 3.1e-09 36.4 6.0 3.1e-09 36.4 6.0 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF26284 - 8.8e-08 31.9 5.4 8.8e-08 31.9 5.4 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF26284 - 2.7e-07 30.5 5.9 2.7e-07 30.5 5.9 1.7 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF26284 - 1.6e-06 27.9 4.1 1.6e-06 27.9 4.1 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF26284 - 2.6e-06 27.6 7.6 2.6e-06 27.6 7.6 2.4 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF26284 - 9.1e-06 25.4 6.5 9.1e-06 25.4 6.5 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF26284 - 2.2e-05 24.5 7.9 0.0016 18.6 7.9 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain zf-RING_UBOX PF13445.6 ORF26284 - 5e-05 23.3 4.5 0.00037 20.5 4.5 2.3 1 1 0 1 1 1 1 RING-type zinc-finger RINGv PF12906.7 ORF26284 - 6.7e-05 22.9 3.6 6.7e-05 22.9 3.6 1.8 1 1 1 2 2 2 1 RING-variant domain zf-ANAPC11 PF12861.7 ORF26284 - 0.0002 21.3 3.9 0.00088 19.3 3.9 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF26284 - 0.0035 17.2 4.2 0.0077 16.1 4.2 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 Baculo_RING PF05883.11 ORF26284 - 0.13 12.3 4.6 0.083 12.9 1.2 1.9 1 1 1 2 2 2 0 Baculovirus U-box/Ring-like domain zf-Di19 PF05605.12 ORF26284 - 0.2 12.0 4.1 4.2 7.7 4.3 2.5 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding CTU2 PF10288.9 ORF26284 - 0.21 11.9 9.6 6.3 7.1 9.6 2.0 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Prok-RING_1 PF14446.6 ORF26284 - 0.23 11.4 8.4 0.98 9.4 0.9 2.6 2 1 0 2 2 2 0 Prokaryotic RING finger family 1 Zn_ribbon_17 PF17120.5 ORF26284 - 0.8 9.4 6.9 2 8.1 5.4 2.0 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type NIF PF03031.18 ORF25426 - 8.1e-07 28.9 0.1 8.9e-07 28.8 0.1 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF515 PF04415.12 ORF24444 - 5.1 5.4 6.7 5.8 5.2 6.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) ABA_WDS PF02496.16 ORF221 - 4.6e-07 30.2 4.7 0.002 18.6 0.1 2.6 1 1 1 2 2 2 2 ABA/WDS induced protein Pkinase PF00069.25 ORF21960 - 3.2e-05 23.4 0.5 4.3e-05 23.0 0.5 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF21960 - 0.0011 18.3 0.3 0.0015 17.9 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Hap4_Hap_bind PF10297.9 ORF19276 - 0.041 14.0 1.7 0.084 13.0 1.7 1.5 1 0 0 1 1 1 0 Minimal binding motif of Hap4 for binding to Hap2/3/5 V_ATPase_prox PF18274.1 ORF19276 - 0.21 11.6 2.3 0.37 10.8 1.8 1.8 1 1 0 1 1 1 0 Vacuolar ATPase Subunit I N-terminal proximal lobe TRP_2 PF08344.11 ORF18136 - 0.56 10.5 6.9 0.97 9.7 6.9 1.3 1 0 0 1 1 1 0 Transient receptor ion channel II # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks232.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks232.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks232.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks232.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:18:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NADH_dh_m_C1 PF15088.6 ORF17855 - 0.0055 16.3 0.0 0.0088 15.6 0.0 1.3 1 0 0 1 1 1 1 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial GA PF01468.17 ORF17722 - 0.037 14.3 0.1 0.079 13.3 0.1 1.6 1 0 0 1 1 1 0 GA module Patatin PF01734.22 ORF16939 - 7.4e-11 42.6 0.0 8.6e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 Patatin-like phospholipase DUF2512 PF10710.9 ORF16805 - 0.011 15.5 2.8 0.013 15.2 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2512) LETM1 PF07766.13 ORF16240 - 0.076 12.4 5.6 0.085 12.2 5.6 1.1 1 0 0 1 1 1 0 LETM1-like protein EF-hand_1 PF00036.32 ORF152521 - 2.3e-05 23.6 0.0 0.037 13.6 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF152521 - 4.3e-05 23.1 0.0 0.39 10.8 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF152521 - 7.5e-05 22.5 0.0 0.00012 21.9 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF152521 - 0.00014 22.2 0.0 0.0002 21.7 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_4 PF12763.7 ORF152521 - 0.00057 19.8 0.0 0.00091 19.2 0.0 1.4 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Sec62 PF03839.16 ORF151812 - 0.35 10.4 1.8 0.46 10.0 1.8 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 PAP_assoc PF03828.19 ORF151133 - 1.1e-05 25.6 0.1 3.4e-05 24.0 0.1 1.8 1 1 0 1 1 1 1 Cid1 family poly A polymerase Nrap_D2 PF17403.2 ORF151133 - 0.011 15.5 0.0 0.011 15.4 0.0 1.2 1 1 0 1 1 1 0 Nrap protein PAP/OAS-like domain Acetyltransf_CG PF14542.6 ORF147068 - 0.066 13.4 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase RICH PF05062.12 ORF147068 - 0.55 10.6 4.7 0.62 10.5 3.6 1.7 1 1 1 2 2 2 0 RICH domain GAF_2 PF13185.6 ORF146975 - 0.21 11.9 0.0 0.29 11.4 0.0 1.3 1 0 0 1 1 1 0 GAF domain Tetraspanin PF00335.20 ORF142152 - 0.098 12.4 0.1 0.1 12.3 0.1 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF3143 PF11341.8 ORF141644 - 0.36 11.2 0.2 0.36 11.2 0.2 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3143) CC PF04942.14 ORF141644 - 1.3 9.3 0.0 1.3 9.3 0.0 3.0 3 0 0 3 3 3 0 CC domain OTT_1508_deam PF14441.6 ORF138547 - 2.1 8.4 6.3 11 6.1 1.4 3.0 1 1 2 3 3 3 0 OTT_1508-like deaminase TP2 PF01254.18 ORF138525 - 0.025 15.2 3.8 0.031 14.9 3.8 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 Axin_b-cat_bind PF08833.10 ORF138525 - 0.084 13.0 1.4 1.4 9.1 1.4 2.3 1 1 0 1 1 1 0 Axin beta-catenin binding domain Clusterin PF01093.17 ORF138391 - 0.064 12.3 0.0 0.068 12.2 0.0 1.1 1 0 0 1 1 1 0 Clusterin ABC2_membrane_3 PF12698.7 ORF138391 - 0.22 10.6 0.5 0.25 10.4 0.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Asp PF00026.23 ORF137467 - 6.7e-14 52.0 0.1 7.7e-14 51.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF137467 - 0.00012 21.8 0.0 0.00015 21.6 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal IL6 PF00489.17 ORF137362 - 0.11 12.0 0.3 0.79 9.3 0.1 1.9 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family AAR2 PF05282.11 ORF137362 - 0.13 11.7 1.8 0.1 12.0 1.8 1.2 1 0 0 1 1 1 0 AAR2 protein Pkinase PF00069.25 ORF135749 - 3.2e-05 23.4 0.5 4.3e-05 23.0 0.5 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF135749 - 0.0011 18.3 0.3 0.0015 17.9 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Fe-S_biosyn PF01521.20 ORF13563 - 1e-20 73.9 0.0 1.2e-20 73.8 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis PTN_MK_N PF05196.13 ORF135438 - 0.097 12.9 0.0 0.18 12.1 0.0 1.4 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, N-terminal domain DUF1815 PF08844.10 ORF135409 - 0.11 12.5 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) DUF2830 PF11125.8 ORF135206 - 0.024 14.6 1.1 0.056 13.4 1.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2830) 5_3_exonuc_N PF02739.16 ORF135189 - 0.093 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain tRNA_m1G_MT PF01746.21 ORF134029 - 7.2e-17 61.7 0.2 1.6e-16 60.6 0.0 1.6 2 0 0 2 2 2 1 tRNA (Guanine-1)-methyltransferase BTHB PF18410.1 ORF134029 - 0.02 14.7 0.7 0.085 12.7 0.0 2.0 1 1 0 2 2 2 0 Basic tilted helix bundle domain TEA PF01285.18 ORF134029 - 0.022 14.8 0.8 0.22 11.6 0.8 2.3 1 1 0 1 1 1 0 TEA/ATTS domain REV PF00424.18 ORF133120 - 0.74 9.9 3.6 1.4 9.0 3.6 1.6 1 1 0 1 1 1 0 REV protein (anti-repression trans-activator protein) ODR4-like PF14778.6 ORF132626 - 0.2 10.6 0.1 0.24 10.3 0.1 1.0 1 0 0 1 1 1 0 Olfactory receptor 4-like TFIID_30kDa PF03540.13 ORF131673 - 0.0015 18.5 0.1 0.003 17.5 0.0 1.6 2 0 0 2 2 2 1 Transcription initiation factor TFIID 23-30kDa subunit MKT1_C PF12246.8 ORF131673 - 0.015 14.6 0.0 0.021 14.1 0.0 1.1 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication TAF4 PF05236.14 ORF131673 - 0.056 13.2 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family tRNA_anti-like PF12869.7 ORF131069 - 0.096 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 tRNA_anti-like WW PF00397.26 ORF131069 - 0.11 12.6 0.0 0.11 12.6 0.0 1.8 2 0 0 2 2 2 0 WW domain Clp_N PF02861.20 ORF130494 - 0.29 11.3 0.1 0.29 11.3 0.1 1.6 2 0 0 2 2 2 0 Clp amino terminal domain, pathogenicity island component MPC PF03650.13 ORF129451 - 1.6e-33 115.1 1.2 1.8e-33 114.9 1.2 1.0 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers Rrn6 PF10214.9 ORF127137 - 0.074 11.5 6.4 0.078 11.5 6.4 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor TipAS PF07739.13 ORF127137 - 0.11 13.0 1.9 0.15 12.6 1.9 1.1 1 0 0 1 1 1 0 TipAS antibiotic-recognition domain CCDC-167 PF15188.6 ORF127137 - 2.3 8.6 4.9 3.4 8.1 4.9 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 RMF PF04957.12 ORF12706 - 0.005 17.0 0.6 0.015 15.5 0.5 1.7 1 1 1 2 2 2 1 Ribosome modulation factor MafB PF06255.13 ORF12682 - 0.036 13.5 0.0 0.04 13.3 0.0 1.1 1 0 0 1 1 1 0 Neisseria toxin MafB Spore_III_AB PF09548.10 ORF12682 - 0.061 13.4 1.1 0.073 13.2 1.1 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) DUF816 PF05674.12 ORF12682 - 0.18 11.7 4.9 0.47 10.4 4.5 1.7 1 1 1 2 2 2 0 Baculovirus protein of unknown function (DUF816) Adhes-Ig_like PF09085.10 ORF126712 - 2 8.6 4.3 0.34 11.0 0.5 1.6 2 0 0 2 2 2 0 Adhesion molecule, immunoglobulin-like SID-1_RNA_chan PF13965.6 ORF126703 - 0.028 12.9 0.3 0.033 12.6 0.3 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Porphyrn_cat_1 PF18206.1 ORF126595 - 0.13 12.9 4.5 0.18 12.4 4.5 1.2 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 Cyt-b5 PF00173.28 ORF126502 - 5.8e-22 77.6 0.0 6.9e-22 77.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain C_Hendra PF16821.5 ORF125470 - 0.0086 16.0 5.2 0.011 15.6 5.2 1.3 1 1 0 1 1 1 1 C protein from hendra and measles viruses PAH PF02671.21 ORF124163 - 0.015 15.4 2.1 0.018 15.2 2.1 1.5 1 1 0 1 1 1 0 Paired amphipathic helix repeat DUF3787 PF12655.7 ORF123500 - 0.028 14.3 0.1 0.063 13.2 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3787) GCR PF02155.15 ORF122960 - 0.16 11.0 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 Glucocorticoid receptor Cyt-b5 PF00173.28 ORF122187 - 5.8e-22 77.6 0.0 6.9e-22 77.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain zf-primase PF09329.11 ORF122006 - 0.077 12.8 0.1 0.14 12.0 0.1 1.5 1 0 0 1 1 1 0 Primase zinc finger DUF2830 PF11125.8 ORF121924 - 0.024 14.6 1.1 0.056 13.4 1.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2830) TraL PF07178.11 ORF120898 - 0.027 14.9 2.0 0.037 14.5 1.7 1.4 1 1 0 1 1 1 0 TraL protein MtrF PF09472.10 ORF120537 - 0.058 12.8 0.0 0.082 12.3 0.0 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) DUF148 PF02520.17 ORF11988 - 0.0021 18.1 15.3 0.0021 18.1 15.3 1.4 1 1 0 1 1 1 1 Domain of unknown function DUF148 Rotamase_2 PF13145.6 ORF11988 - 0.011 16.5 5.3 0.013 16.3 5.3 1.1 1 0 0 1 1 1 0 PPIC-type PPIASE domain Lipase_chap PF03280.14 ORF11988 - 0.17 11.8 0.4 0.17 11.8 0.4 2.1 1 1 1 2 2 2 0 Proteobacterial lipase chaperone protein Rootletin PF15035.6 ORF11988 - 0.59 10.1 17.2 0.29 11.1 15.0 1.5 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion PDDEXK_6 PF04720.12 ORF11988 - 3.6 7.5 12.3 4.1 7.3 12.3 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function TMPIT PF07851.13 ORF11988 - 6.9 5.8 15.6 8.2 5.6 15.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4769 PF15992.5 ORF117891 - 0.23 11.2 1.0 0.28 10.9 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) Sen15 PF09631.10 ORF117545 - 0.052 13.8 0.2 0.069 13.5 0.2 1.2 1 0 0 1 1 1 0 Sen15 protein Gastrin PF00918.17 ORF117325 - 0.033 15.1 0.2 0.044 14.8 0.2 1.1 1 0 0 1 1 1 0 Gastrin/cholecystokinin family TetR_C_19 PF17924.1 ORF116961 - 0.0061 17.1 4.1 0.008 16.8 4.1 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain NFACT-R_2 PF18297.1 ORF116961 - 0.17 12.1 0.0 4.1 7.7 0.0 2.1 2 0 0 2 2 2 0 NFACT protein RNA binding domain LTD PF00932.19 ORF116670 - 0.022 15.1 0.0 0.031 14.6 0.0 1.4 1 0 0 1 1 1 0 Lamin Tail Domain HopA1 PF17914.1 ORF115532 - 0.006 16.4 0.2 0.0069 16.2 0.2 1.1 1 0 0 1 1 1 1 HopA1 effector protein family Mannosyl_trans2 PF04188.13 ORF115413 - 0.12 11.6 8.7 0.13 11.5 8.7 1.0 1 0 0 1 1 1 0 Mannosyltransferase (PIG-V) DUF4731 PF15875.5 ORF114798 - 0.088 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) Pkinase PF00069.25 ORF113406 - 3.2e-05 23.4 0.5 4.3e-05 23.0 0.5 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF113406 - 0.0011 18.3 0.3 0.0015 17.9 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase DAOA PF15199.6 ORF111217 - 0.073 13.5 0.0 0.25 11.8 0.0 1.7 1 1 0 1 1 1 0 D-amino acid oxidase activator TetR_C_4 PF08359.11 ORF111071 - 0.017 15.3 0.3 0.02 15.0 0.3 1.1 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region Methyltransf_PK PF05891.12 ORF111071 - 0.056 12.9 0.4 0.056 12.9 0.4 1.9 1 1 1 2 2 2 0 AdoMet dependent proline di-methyltransferase Fe-S_biosyn PF01521.20 ORF110137 - 1.4e-17 63.8 0.0 1.6e-17 63.7 0.0 1.0 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis Squash PF00299.18 ORF109898 - 0.15 12.1 0.7 0.15 12.1 0.7 1.6 2 0 0 2 2 2 0 Squash family serine protease inhibitor PTPS_related PF10131.9 ORF109314 - 1.2 7.4 6.2 1.3 7.3 6.2 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein pEK499_p136 PF18736.1 ORF108209 - 1.8 8.2 4.2 13 5.4 0.2 2.2 2 0 0 2 2 2 0 HEPN pEK499 p136 RhoGEF67_u1 PF16615.5 ORF108073 - 0.0058 17.1 0.5 0.0058 17.1 0.5 2.1 3 0 0 3 3 3 1 Unstructured region one on RhoGEF 6 and 7 RgpF PF05045.12 ORF107916 - 0.061 12.1 0.3 0.071 11.9 0.3 1.0 1 0 0 1 1 1 0 Rhamnan synthesis protein F ERGIC_N PF13850.6 ORF107660 - 0.0016 18.7 0.1 0.002 18.4 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TCO89 PF10452.9 ORF107601 - 0.0026 16.8 0.4 0.0026 16.8 0.4 1.0 1 0 0 1 1 1 1 TORC1 subunit TCO89 Hat1_N PF10394.9 ORF107601 - 0.0037 17.5 0.3 0.005 17.1 0.3 1.3 1 1 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus NUDIX_4 PF14815.6 ORF107055 - 0.098 12.7 0.7 0.098 12.7 0.7 1.6 2 0 0 2 2 2 0 NUDIX domain AA_permease_C PF13906.6 ORF106719 - 0.0023 17.9 6.5 0.15 12.2 1.9 2.5 2 0 0 2 2 2 2 C-terminus of AA_permease C_Hendra PF16821.5 ORF106518 - 0.0086 16.0 5.2 0.011 15.6 5.2 1.3 1 1 0 1 1 1 1 C protein from hendra and measles viruses CLLAC PF15675.5 ORF106088 - 0.77 9.4 4.2 2 8.1 4.2 1.7 1 0 0 1 1 1 0 CLLAC-motif containing domain LRR_5 PF13306.6 ORF105812 - 0.021 14.8 0.4 0.048 13.6 0.1 1.6 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) Fae PF08714.11 ORF105812 - 0.11 12.4 0.5 0.2 11.6 0.2 1.5 2 0 0 2 2 2 0 Formaldehyde-activating enzyme (Fae) UPF0240 PF06784.11 ORF105784 - 0.012 15.7 1.5 0.019 15.1 1.5 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0240) DUF4665 PF15679.5 ORF105784 - 0.015 15.9 4.1 0.034 14.8 4.3 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4665) DUF2564 PF10819.8 ORF105784 - 0.028 14.8 0.0 0.05 14.0 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2564) SIKE PF05769.11 ORF105784 - 0.045 13.7 2.9 0.054 13.4 2.9 1.1 1 0 0 1 1 1 0 SIKE family PLCC PF14466.6 ORF104678 - 0.033 14.3 0.8 0.053 13.6 0.8 1.3 1 1 0 1 1 1 0 PLAT/LH2 and C2-like Ca2+-binding lipoprotein Spec3 PF15795.5 ORF104546 - 8.5e-12 45.5 15.8 7.4e-10 39.2 15.8 2.1 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein NIF PF03031.18 ORF103200 - 8.1e-07 28.9 0.1 8.9e-07 28.8 0.1 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF983 PF06170.12 ORF102647 - 0.0099 16.3 9.2 30 5.1 0.1 4.7 1 1 4 5 5 5 0 Protein of unknown function (DUF983) zf-RING_7 PF02591.15 ORF102647 - 0.037 14.2 14.1 2 8.7 0.1 4.6 5 0 0 5 5 5 0 C4-type zinc ribbon domain C1_1 PF00130.22 ORF102647 - 0.45 10.4 7.8 1.2 9.0 0.3 3.3 1 1 3 4 4 4 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Cas_CXXC_CXXC PF09706.10 ORF102647 - 0.72 10.1 8.8 24 5.3 0.0 4.5 1 1 4 5 5 5 0 CRISPR-associated protein (Cas_CXXC_CXXC) DHODB_Fe-S_bind PF10418.9 ORF102647 - 1.1 9.2 11.4 19 5.2 1.5 4.3 3 2 2 5 5 5 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DUF3136 PF11334.8 ORF102647 - 1.4 8.8 6.1 14 5.6 0.2 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF3136) zf-trcl PF13451.6 ORF102647 - 3.1 7.7 22.8 20 5.2 0.3 5.0 3 1 2 5 5 5 0 Probable zinc-ribbon domain RINGv PF12906.7 ORF102647 - 8.8 6.5 11.4 73 3.6 0.1 4.1 2 1 2 4 4 4 0 RING-variant domain Sporozoite_P67 PF05642.11 ORF100581 - 0.26 9.3 1.7 0.24 9.5 1.7 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen FdhD-NarQ PF02634.15 ORF100576 - 0.083 12.6 0.9 0.15 11.7 0.6 1.6 1 1 0 1 1 1 0 FdhD/NarQ family EF-hand_1 PF00036.32 ORF100509 - 5.6e-18 63.1 7.4 3.2e-09 35.7 1.4 2.4 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF100509 - 4.6e-15 54.2 4.8 2.4e-08 33.2 0.2 3.0 2 1 1 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF100509 - 2e-14 53.8 2.9 3e-14 53.2 2.9 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF100509 - 2.8e-11 43.1 4.8 1.5e-10 40.7 1.0 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF100509 - 1.4e-06 27.6 6.9 0.00058 19.2 1.6 2.7 2 1 1 3 3 3 2 EF hand EF-hand_9 PF14658.6 ORF100509 - 0.00057 20.2 0.1 0.00078 19.7 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain EF-hand_14 PF17959.1 ORF100509 - 0.00094 19.5 0.7 0.00094 19.5 0.7 1.9 1 1 1 2 2 2 1 EF-hand domain Peptidase_S46 PF10459.9 ORF100509 - 0.0023 16.7 3.7 0.0025 16.6 3.7 1.0 1 0 0 1 1 1 1 Peptidase S46 EF-hand_4 PF12763.7 ORF100509 - 0.0081 16.1 1.8 0.061 13.3 1.6 2.0 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand UPF0154 PF03672.13 ORF100509 - 0.012 15.6 1.4 0.26 11.4 0.0 2.3 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0154) DUF1002 PF06207.11 ORF100509 - 0.013 15.0 2.1 0.15 11.6 1.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1002) SPARC_Ca_bdg PF10591.9 ORF100509 - 0.016 15.5 1.3 0.021 15.1 1.3 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Acetyltransf_11 PF13720.6 ORF100509 - 0.063 13.7 0.2 0.13 12.8 0.2 1.5 1 1 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SAP PF02037.27 ORF100509 - 0.077 12.8 0.9 3 7.7 0.0 3.0 2 1 1 3 3 3 0 SAP domain P22_AR_C PF10548.9 ORF100503 - 0.2 11.8 0.0 0.32 11.2 0.0 1.3 1 0 0 1 1 1 0 P22AR C-terminal domain ECSCR PF15820.5 NODE_52830_length_337_cov_1.546358_g44906_i0reverse_frame_1 - 0.095 12.5 2.3 0.25 11.2 1.8 1.7 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator TraV PF09676.10 NODE_52830_length_337_cov_1.546358_g44906_i0reverse_frame_1 - 1.2 10.2 8.1 1.4 9.9 8.1 1.1 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) PP1_bind PF15276.6 NODE_52825_length_337_cov_1.850993_g44901_i0reverse_frame_1 - 0.11 12.9 0.0 0.16 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein phosphatase 1 binding LapA_dom PF06305.11 NODE_52822_length_337_cov_1.937086_g44898_i0reverse_frame_1 - 0.015 15.1 0.0 0.028 14.2 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF4118 PF13493.6 NODE_52822_length_337_cov_1.937086_g44898_i0reverse_frame_1 - 0.066 13.0 0.9 0.1 12.4 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) HemY_N PF07219.13 NODE_52822_length_337_cov_1.937086_g44898_i0reverse_frame_1 - 0.16 12.2 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus NPBW PF15180.6 NODE_52813_length_337_cov_2.245033_g44889_i0reverse_frame_1 - 0.092 12.6 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Neuropeptides B and W STAS PF01740.21 NODE_52813_length_337_cov_2.245033_g44889_i0forward_frame_1 - 1.4e-13 50.5 0.0 1.5e-13 50.4 0.0 1.0 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.6 NODE_52813_length_337_cov_2.245033_g44889_i0forward_frame_1 - 0.068 13.5 0.0 0.09 13.1 0.0 1.2 1 0 0 1 1 1 0 STAS domain DUF3648 PF12364.8 NODE_52800_length_337_cov_3.347682_g44876_i0forward_frame_1 - 0.045 14.0 4.1 0.069 13.4 3.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3648) Lamprin PF06403.11 NODE_52797_length_337_cov_4.506623_g44873_i0forward_frame_1 - 1.2 9.1 17.8 1.5 8.7 5.0 2.1 1 1 1 2 2 2 0 Lamprin OrfA PF17495.2 NODE_52796_length_337_cov_4.685430_g44872_i0forward_frame_1 - 0.1 12.8 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Vpr-like OrfA Fis1_TPR_C PF14853.6 NODE_52794_length_337_cov_5.701987_g44870_i0reverse_frame_1 - 0.0014 18.7 0.1 0.0024 17.9 0.1 1.4 1 0 0 1 1 1 1 Fis1 C-terminal tetratricopeptide repeat ANAPC3 PF12895.7 NODE_52794_length_337_cov_5.701987_g44870_i0reverse_frame_1 - 0.003 17.8 0.0 0.0048 17.1 0.0 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 NODE_52794_length_337_cov_5.701987_g44870_i0reverse_frame_1 - 0.016 14.2 0.2 0.019 13.9 0.2 1.2 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TPR_1 PF00515.28 NODE_52794_length_337_cov_5.701987_g44870_i0reverse_frame_1 - 0.019 14.8 0.3 0.13 12.1 0.3 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_52794_length_337_cov_5.701987_g44870_i0reverse_frame_1 - 0.18 12.1 3.1 8.4 6.9 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF5452 PF17533.2 NODE_52789_length_337_cov_50.784768_g44865_i0reverse_frame_1 - 0.084 13.0 1.9 0.092 12.8 1.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5452) Snapin_Pallidin PF14712.6 NODE_52789_length_337_cov_50.784768_g44865_i0forward_frame_1 - 0.042 14.3 0.0 0.055 13.9 0.0 1.2 1 0 0 1 1 1 0 Snapin/Pallidin FAM199X PF15814.5 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_1 - 2.7 7.0 10.5 3.1 6.8 10.5 1.0 1 0 0 1 1 1 0 Protein family FAM199X Pex14_N PF04695.13 NODE_52786_length_337_cov_59.394040_g44862_i0forward_frame_1 - 0.051 14.2 3.2 0.057 14.1 3.2 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF1631 PF07793.11 NODE_52786_length_337_cov_59.394040_g44862_i0forward_frame_1 - 0.61 8.4 1.1 0.62 8.4 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) DUF4614 PF15391.6 NODE_52786_length_337_cov_59.394040_g44862_i0forward_frame_1 - 4.1 7.4 13.5 5 7.1 13.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) C_GCAxxG_C_C PF09719.10 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.0063 16.8 1.9 0.0072 16.6 1.9 1.1 1 0 0 1 1 1 1 Putative redox-active protein (C_GCAxxG_C_C) OAD_gamma PF04277.13 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.015 15.9 1.5 0.015 15.9 1.5 2.2 1 1 1 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Tetraspanin PF00335.20 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.027 14.2 0.6 0.027 14.2 0.6 1.4 2 0 0 2 2 2 0 Tetraspanin family DUF4834 PF16118.5 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.033 15.1 0.0 0.046 14.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Connexin PF00029.19 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.12 12.1 0.4 0.14 11.9 0.4 1.2 1 0 0 1 1 1 0 Connexin MRI PF15325.6 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_1 - 0.17 12.9 4.3 0.25 12.5 4.3 1.1 1 0 0 1 1 1 0 Modulator of retrovirus infection Arena_ncap_C PF17290.2 NODE_52778_length_337_cov_72.586093_g44854_i0forward_frame_1 - 0.0092 15.3 0.1 0.013 14.9 0.1 1.2 1 1 0 1 1 1 1 Arenavirus nucleocapsid C-terminal domain RRXRR PF14239.6 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_1 - 0.058 13.2 0.3 0.073 12.9 0.3 1.1 1 0 0 1 1 1 0 RRXRR protein RicinB_lectin_2 PF14200.6 NODE_52771_length_337_cov_81.735099_g44847_i0reverse_frame_1 - 0.0097 16.6 0.3 0.013 16.2 0.3 1.2 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain-like DUF5346 PF17281.2 NODE_52769_length_337_cov_84.433775_g44845_i0reverse_frame_1 - 2.3 8.3 8.6 4.3 7.4 8.6 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5346) ToxS PF17323.2 NODE_52769_length_337_cov_84.433775_g44845_i0forward_frame_1 - 0.0056 16.4 0.5 0.0063 16.2 0.5 1.2 1 0 0 1 1 1 1 Trans-membrane regulatory protein ToxS Tup_N PF08581.10 NODE_52768_length_337_cov_86.016556_g44844_i0forward_frame_1 - 0.015 15.5 0.9 0.36 11.2 0.3 2.5 2 1 0 2 2 2 0 Tup N-terminal Utp13 PF08625.11 NODE_52768_length_337_cov_86.016556_g44844_i0forward_frame_1 - 0.045 13.6 0.7 0.056 13.4 0.7 1.2 1 0 0 1 1 1 0 Utp13 specific WD40 associated domain WD40_alt PF14077.6 NODE_52768_length_337_cov_86.016556_g44844_i0forward_frame_1 - 0.06 13.2 0.7 7 6.6 0.2 2.5 2 0 0 2 2 2 0 Alternative WD40 repeat motif SEC-C PF02810.15 NODE_52768_length_337_cov_86.016556_g44844_i0forward_frame_1 - 0.15 12.0 0.5 0.22 11.5 0.5 1.3 1 0 0 1 1 1 0 SEC-C motif Pox_A30L_A26L PF06086.12 NODE_52761_length_337_cov_121.841060_g44837_i0forward_frame_1 - 0.09 12.5 1.8 0.13 11.9 1.0 1.5 1 1 1 2 2 2 0 Orthopoxvirus A26L/A30L protein Dymeclin PF09742.9 NODE_52752_length_337_cov_231.887417_g44828_i0forward_frame_1 - 0.3 9.4 3.1 0.32 9.4 3.1 1.1 1 0 0 1 1 1 0 Dyggve-Melchior-Clausen syndrome protein HMG_box PF00505.19 NODE_52750_length_337_cov_244.533113_g44826_i0reverse_frame_1 - 9.9e-09 35.5 0.0 1.9e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 HMG (high mobility group) box DYW_deaminase PF14432.6 NODE_52750_length_337_cov_244.533113_g44826_i0reverse_frame_1 - 0.054 13.4 0.0 0.064 13.1 0.0 1.1 1 0 0 1 1 1 0 DYW family of nucleic acid deaminases HMG_box_2 PF09011.10 NODE_52750_length_337_cov_244.533113_g44826_i0reverse_frame_1 - 0.076 13.6 0.0 0.076 13.6 0.0 1.7 2 0 0 2 2 2 0 HMG-box domain DUF364 PF04016.12 NODE_52748_length_337_cov_299.798013_g44824_i0forward_frame_1 - 0.23 11.1 0.2 0.61 9.7 0.1 1.7 1 1 1 2 2 2 0 Putative heavy-metal chelation TMEM187 PF15100.6 NODE_52742_length_338_cov_1.231023_g44818_i0reverse_frame_1 - 0.0026 17.4 0.0 0.0028 17.3 0.0 1.1 1 0 0 1 1 1 1 TMEM187 protein family DUF4401 PF14351.6 NODE_52741_length_338_cov_1.316832_g44817_i0reverse_frame_1 - 0.0058 16.0 0.7 0.0068 15.8 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4401) Snapin_Pallidin PF14712.6 NODE_52741_length_338_cov_1.316832_g44817_i0forward_frame_1 - 0.064 13.7 3.1 0.097 13.1 3.1 1.4 1 1 0 1 1 1 0 Snapin/Pallidin DUF948 PF06103.11 NODE_52741_length_338_cov_1.316832_g44817_i0forward_frame_1 - 0.18 12.1 0.7 0.44 10.8 0.3 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) SseC PF04888.12 NODE_52741_length_338_cov_1.316832_g44817_i0forward_frame_1 - 0.3 10.6 2.7 0.14 11.7 0.8 1.4 2 0 0 2 2 2 0 Secretion system effector C (SseC) like family PdaC PF13739.6 NODE_52741_length_338_cov_1.316832_g44817_i0forward_frame_1 - 8.2 7.5 9.7 58 4.8 0.9 2.1 1 1 1 2 2 2 0 Deacetylase PdaC Cbl_N2 PF02761.14 NODE_52739_length_338_cov_1.442244_g44815_i0forward_frame_1 - 0.072 13.8 0.3 0.16 12.7 0.1 1.6 2 0 0 2 2 2 0 CBL proto-oncogene N-terminus, EF hand-like domain POX PF07526.11 NODE_52725_length_338_cov_2.095710_g44801_i0reverse_frame_1 - 0.067 13.8 0.1 0.071 13.7 0.1 1.1 1 0 0 1 1 1 0 Associated with HOX CYSTM PF12734.7 NODE_52723_length_338_cov_2.198020_g44799_i0reverse_frame_1 - 5.6e-06 26.6 11.7 9e-06 25.9 11.7 1.3 1 0 0 1 1 1 1 Cysteine-rich TM module stress tolerance Rtt102p PF09510.10 NODE_52723_length_338_cov_2.198020_g44799_i0reverse_frame_1 - 0.024 14.8 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Rtt102p-like transcription regulator protein Mob1_phocein PF03637.17 NODE_52721_length_338_cov_2.224422_g44797_i0reverse_frame_1 - 0.08 13.0 1.3 4.5 7.3 0.3 2.0 1 1 1 2 2 2 0 Mob1/phocein family DSPc PF00782.20 NODE_52721_length_338_cov_2.224422_g44797_i0forward_frame_1 - 1e-05 25.4 0.0 1.2e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Ferric_reduct PF01794.19 NODE_52718_length_338_cov_2.425743_g44794_i0reverse_frame_1 - 0.029 14.5 0.1 0.034 14.3 0.1 1.1 1 0 0 1 1 1 0 Ferric reductase like transmembrane component ATP-synt_8 PF00895.20 NODE_52718_length_338_cov_2.425743_g44794_i0reverse_frame_1 - 3.7 8.1 5.6 5.5 7.5 0.5 2.5 2 1 1 3 3 3 0 ATP synthase protein 8 7tm_1 PF00001.21 NODE_52718_length_338_cov_2.425743_g44794_i0forward_frame_1 - 0.026 13.8 0.3 0.03 13.7 0.3 1.1 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) PP-binding PF00550.25 NODE_52714_length_338_cov_2.729373_g44790_i0forward_frame_1 - 2.1e-12 47.2 0.1 2.8e-12 46.8 0.1 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site Thioesterase PF00975.20 NODE_52714_length_338_cov_2.729373_g44790_i0forward_frame_1 - 0.066 13.3 0.1 0.074 13.1 0.1 1.1 1 0 0 1 1 1 0 Thioesterase domain RecO_N PF11967.8 NODE_52713_length_338_cov_2.755776_g44789_i0reverse_frame_1 - 0.065 13.2 0.1 0.13 12.2 0.1 1.5 2 0 0 2 2 2 0 Recombination protein O N terminal Cupin_2 PF07883.11 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 6.1e-09 35.5 0.1 7.9e-09 35.1 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 1.8e-05 24.7 0.3 2.2e-05 24.4 0.3 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_7 PF12973.7 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.0015 18.4 0.2 0.0019 18.0 0.2 1.2 1 0 0 1 1 1 1 ChrR Cupin-like domain EutQ PF06249.12 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.0036 17.1 0.0 0.0042 16.9 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ JmjC PF02373.22 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.02 15.3 0.0 0.025 15.0 0.0 1.4 1 1 0 1 1 1 0 JmjC domain, hydroxylase Cupin_6 PF12852.7 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.022 14.5 0.0 0.026 14.2 0.0 1.1 1 0 0 1 1 1 0 Cupin AraC_binding_2 PF14525.6 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.025 14.3 0.0 0.029 14.1 0.0 1.1 1 0 0 1 1 1 0 AraC-binding-like domain Cupin_3 PF05899.12 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.029 14.0 0.0 0.034 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Gifsy-2 PF13856.6 NODE_52712_length_338_cov_2.798680_g44788_i0reverse_frame_1 - 0.07 13.5 0.0 0.095 13.1 0.0 1.3 1 1 0 1 1 1 0 ATP-binding sugar transporter from pro-phage Abhydrolase_3 PF07859.13 NODE_52711_length_338_cov_2.891089_g44787_i0reverse_frame_1 - 8e-09 35.7 0.0 8.7e-09 35.5 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Ins_beta PF03488.14 NODE_52709_length_338_cov_2.950495_g44785_i0reverse_frame_1 - 0.022 14.8 0.4 0.022 14.8 0.4 2.1 2 1 0 2 2 2 0 Nematode insulin-related peptide beta type Lyase_1 PF00206.20 NODE_52700_length_338_cov_3.547855_g44776_i0forward_frame_1 - 8.9e-24 84.4 0.0 9.8e-24 84.3 0.0 1.0 1 0 0 1 1 1 1 Lyase K-box PF01486.17 NODE_52700_length_338_cov_3.547855_g44776_i0forward_frame_1 - 0.056 13.6 0.6 0.1 12.7 0.4 1.5 1 1 1 2 2 2 0 K-box region Sigma_1s PF02454.16 NODE_52700_length_338_cov_3.547855_g44776_i0forward_frame_1 - 0.08 12.9 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Sigma 1s protein GARP PF16731.5 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.1 12.3 23.7 0.12 12.0 6.3 2.2 1 1 1 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma HD_assoc PF13286.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.13 12.8 4.6 0.19 12.3 4.1 1.5 1 1 0 1 1 1 0 Phosphohydrolase-associated domain Alanine_zipper PF11839.8 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.14 12.5 31.6 0.42 11.0 17.9 2.7 1 1 1 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein DUF4400 PF14348.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.41 10.1 3.6 0.54 9.7 3.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) PhoU PF01895.19 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.46 11.0 9.8 0.52 10.8 5.9 2.1 1 1 1 2 2 2 0 PhoU domain DUF948 PF06103.11 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 0.58 10.4 10.6 2.9 8.2 2.8 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) PCRF PF03462.18 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 1 9.2 16.8 1.4 8.8 16.8 1.2 1 0 0 1 1 1 0 PCRF domain HisKA_3 PF07730.13 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 1.1 9.8 8.6 2.9 8.5 2.2 2.3 1 1 1 2 2 2 0 Histidine kinase Metal_resist PF13801.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 1.2 9.3 15.5 1.5 9.0 15.5 1.2 1 0 0 1 1 1 0 Heavy-metal resistance FUSC PF04632.12 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 1.4 7.3 5.7 1.5 7.2 5.7 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family PmbA_TldD PF01523.16 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 2.7 7.7 9.6 3.1 7.6 9.6 1.1 1 0 0 1 1 1 0 Putative modulator of DNA gyrase AAA_11 PF13086.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 5.1 6.8 18.2 2.1 8.1 16.4 1.3 1 1 0 1 1 1 0 AAA domain DUF4398 PF14346.6 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 6.1 7.6 28.7 1.2 9.8 16.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4398) Peptidase_S64 PF08192.11 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 6.4 5.1 14.6 6.9 5.0 14.6 1.1 1 0 0 1 1 1 0 Peptidase family S64 T3SSipB PF16535.5 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 6.7 7.2 28.5 8.2 6.9 23.6 2.1 1 1 1 2 2 2 0 Type III cell invasion protein SipB Cluap1 PF10234.9 NODE_52696_length_338_cov_5.762376_g44772_i0forward_frame_1 - 7.1 5.9 21.5 8.5 5.7 21.5 1.1 1 0 0 1 1 1 0 Clusterin-associated protein-1 TAXi_N PF14543.6 NODE_52695_length_338_cov_8.788779_g44771_i0reverse_frame_1 - 0.16 12.2 7.2 0.17 12.1 7.2 1.1 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal PSRP-3_Ycf65 PF04839.13 NODE_52694_length_338_cov_9.386139_g44770_i0forward_frame_1 - 0.098 12.9 0.3 0.16 12.2 0.3 1.4 1 0 0 1 1 1 0 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) Acetyltransf_6 PF13480.7 NODE_52685_length_338_cov_54.686469_g44761_i0forward_frame_1 - 0.055 13.6 0.0 0.066 13.4 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain SpoVS PF04232.12 NODE_52685_length_338_cov_54.686469_g44761_i0forward_frame_1 - 0.12 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein S (SpoVS) Cu-oxidase_4 PF02578.15 NODE_52678_length_338_cov_70.564356_g44754_i0reverse_frame_1 - 0.025 14.2 0.0 0.03 13.9 0.0 1.2 1 0 0 1 1 1 0 Multi-copper polyphenol oxidoreductase laccase zf-C2HC5 PF06221.13 NODE_52678_length_338_cov_70.564356_g44754_i0forward_frame_1 - 6.2 6.9 11.0 5.2 7.1 5.9 2.5 2 1 0 2 2 2 0 Putative zinc finger motif, C2HC5-type DUF3287 PF11690.8 NODE_52673_length_338_cov_78.046205_g44749_i0forward_frame_1 - 0.032 14.0 0.0 0.042 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) Comm PF15957.5 NODE_52664_length_338_cov_101.283828_g44740_i0forward_frame_1 - 0.0024 18.2 0.0 0.0029 17.9 0.0 1.2 1 0 0 1 1 1 1 Commissureless Insulin_TMD PF17870.1 NODE_52664_length_338_cov_101.283828_g44740_i0forward_frame_1 - 0.26 11.4 4.0 0.57 10.3 4.0 1.5 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment Adeno_E3_CR2 PF02439.15 NODE_52664_length_338_cov_101.283828_g44740_i0forward_frame_1 - 0.38 10.5 8.0 0.58 10.0 8.0 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 PhaP_Bmeg PF09602.10 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.0013 18.7 2.3 0.0019 18.2 2.3 1.2 1 0 0 1 1 1 1 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) ABC_tran_CTD PF16326.5 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.012 15.8 12.1 0.017 15.4 0.1 2.9 2 1 1 3 3 3 0 ABC transporter C-terminal domain Syntaxin-6_N PF09177.11 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.021 15.4 1.9 0.032 14.8 1.9 1.4 1 1 0 1 1 1 0 Syntaxin 6, N-terminal EzrA PF06160.12 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.051 11.8 7.1 0.1 10.8 7.1 1.4 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA HlyD_2 PF12700.7 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.056 12.2 1.0 0.066 11.9 0.5 1.3 1 1 0 1 1 1 0 HlyD family secretion protein HMMR_C PF15908.5 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.089 13.1 4.8 0.083 13.2 3.5 1.7 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal DMPK_coil PF08826.10 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.22 11.7 2.4 4.5 7.5 0.5 2.4 2 0 0 2 2 2 0 DMPK coiled coil domain like VSG_B PF13206.6 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.6 9.3 5.4 1 8.5 5.4 1.4 1 1 0 1 1 1 0 Trypanosomal VSG domain ISG65-75 PF11727.8 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 0.73 9.0 6.6 0.91 8.7 5.4 1.7 1 1 1 2 2 2 0 Invariant surface glycoprotein AAA_23 PF13476.6 NODE_52659_length_338_cov_122.508251_g44735_i0forward_frame_1 - 2.4 8.6 7.4 3.5 8.1 7.4 1.4 1 1 0 1 1 1 0 AAA domain Tweety PF04906.13 NODE_52653_length_338_cov_170.709571_g44729_i0reverse_frame_1 - 0.068 11.8 0.6 0.083 11.5 0.6 1.1 1 0 0 1 1 1 0 Tweety Yos1 PF08571.10 NODE_52651_length_338_cov_215.343234_g44727_i0forward_frame_1 - 1.8e-18 66.6 0.0 2.3e-18 66.2 0.0 1.1 1 0 0 1 1 1 1 Yos1-like Cadherin_C_2 PF16492.5 NODE_52641_length_338_cov_821.432343_g44718_i0forward_frame_1 - 0.13 13.0 0.1 0.18 12.6 0.1 1.2 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal Arnt_C PF18583.1 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.004 16.8 0.4 0.005 16.4 0.4 1.2 1 0 0 1 1 1 1 Aminoarabinose transferase C-terminal domain HALZ PF02183.18 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.0064 16.7 8.7 0.039 14.2 0.2 2.9 2 2 2 4 4 4 2 Homeobox associated leucine zipper CENP-F_leu_zip PF10473.9 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.024 14.7 10.0 0.052 13.6 8.1 1.7 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4672 PF15716.5 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.034 13.8 0.7 0.045 13.4 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) UPF0184 PF03670.13 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 0.18 12.2 1.8 1.9 8.9 0.4 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) APG6_N PF17675.1 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 1.3 9.5 13.2 9 6.8 13.1 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region DivIC PF04977.15 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 2.3 8.1 9.6 0.78 9.6 3.8 2.2 1 1 0 2 2 2 0 Septum formation initiator MSL1_dimer PF16801.5 NODE_52632_length_339_cov_1.391447_g44710_i0forward_frame_1 - 3.3 7.5 8.8 0.62 9.9 5.0 1.9 2 0 0 2 2 2 0 Dimerisation domain of Male-specific-Lethal 1 CK1gamma_C PF12605.8 NODE_52628_length_339_cov_1.506579_g44706_i0reverse_frame_1 - 0.059 14.5 5.3 0.075 14.2 5.3 1.1 1 0 0 1 1 1 0 Casein kinase 1 gamma C terminal Bim_N PF06773.11 NODE_52614_length_339_cov_2.157895_g44692_i0reverse_frame_1 - 0.02 14.5 26.4 0.44 10.3 2.7 4.9 2 2 2 4 4 4 0 Bim protein N-terminus DUF3933 PF13069.6 NODE_52611_length_339_cov_2.223684_g44689_i0forward_frame_1 - 0.13 12.1 0.1 0.22 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3933) Transthyretin PF00576.21 NODE_52609_length_339_cov_2.292763_g44687_i0reverse_frame_1 - 4.1e-09 37.1 0.1 7.6e-09 36.2 0.1 1.4 1 0 0 1 1 1 1 HIUase/Transthyretin family bMG3 PF11974.8 NODE_52609_length_339_cov_2.292763_g44687_i0reverse_frame_1 - 0.0015 18.5 0.1 0.0023 17.9 0.1 1.3 1 0 0 1 1 1 1 Bacterial alpha-2-macroglobulin MG3 domain CarboxypepD_reg PF13620.6 NODE_52609_length_339_cov_2.292763_g44687_i0reverse_frame_1 - 0.022 15.0 0.0 0.038 14.2 0.0 1.3 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain Big_1 PF02369.16 NODE_52609_length_339_cov_2.292763_g44687_i0reverse_frame_1 - 0.023 14.7 0.2 0.033 14.2 0.2 1.2 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 1) EGF PF00008.27 NODE_52606_length_339_cov_2.480263_g44684_i0forward_frame_1 - 0.062 13.6 0.2 0.13 12.5 0.2 1.6 1 1 0 1 1 1 0 EGF-like domain QVR PF17064.5 NODE_52606_length_339_cov_2.480263_g44684_i0forward_frame_1 - 0.14 12.4 6.6 0.16 12.2 5.9 1.4 2 0 0 2 2 2 0 Sleepless protein Noc2 PF03715.13 NODE_52605_length_339_cov_2.483553_g44683_i0reverse_frame_1 - 7e-18 64.9 6.4 7.6e-18 64.8 6.4 1.0 1 0 0 1 1 1 1 Noc2p family DUF3487 PF11990.8 NODE_52604_length_339_cov_2.565789_g44682_i0forward_frame_1 - 0.011 15.6 0.4 0.014 15.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DUF3325 PF11804.8 NODE_52594_length_339_cov_3.417763_g44672_i0forward_frame_1 - 0.16 12.2 0.0 0.26 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) IBR PF01485.21 NODE_52588_length_339_cov_5.559211_g44666_i0reverse_frame_1 - 0.044 14.0 2.0 0.044 14.0 2.0 1.8 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain zf-B_box PF00643.24 NODE_52588_length_339_cov_5.559211_g44666_i0reverse_frame_1 - 0.063 13.5 1.8 0.063 13.5 1.8 2.3 2 0 0 2 2 2 0 B-box zinc finger DnaB_bind PF10410.9 NODE_52585_length_339_cov_26.032895_g44663_i0forward_frame_1 - 0.019 15.1 0.0 0.031 14.5 0.0 1.4 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase DUF3014 PF11219.8 NODE_52583_length_339_cov_43.713816_g44661_i0forward_frame_1 - 0.081 13.2 0.0 0.097 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3014) DUF357 PF04010.13 NODE_52583_length_339_cov_43.713816_g44661_i0forward_frame_1 - 0.18 11.9 0.0 0.35 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF357) DUF5363 PF17320.2 NODE_52580_length_339_cov_47.723684_g44658_i0forward_frame_1 - 3 7.8 6.0 0.24 11.3 0.9 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5363) DUF2757 PF10955.8 NODE_52560_length_339_cov_75.934211_g44638_i0forward_frame_1 - 0.015 15.5 0.3 0.026 14.8 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2757) DUF3338 PF11819.8 NODE_52559_length_339_cov_76.526316_g44637_i0reverse_frame_1 - 0.14 12.2 0.2 0.19 11.7 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3338) JHBP PF06585.11 NODE_52555_length_339_cov_79.855263_g44633_i0reverse_frame_1 - 0.03 13.5 0.0 0.036 13.2 0.0 1.1 1 0 0 1 1 1 0 Haemolymph juvenile hormone binding protein (JHBP) SPARC_Ca_bdg PF10591.9 NODE_52554_length_339_cov_80.351974_g44632_i0reverse_frame_1 - 0.025 14.9 0.2 0.041 14.2 0.2 1.3 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region GlpM PF06942.12 NODE_52552_length_339_cov_81.167763_g44630_i0forward_frame_1 - 0.086 13.3 2.6 0.12 12.8 2.6 1.2 1 0 0 1 1 1 0 GlpM protein Gly_rich_SFCGS PF14272.6 NODE_52551_length_339_cov_82.388158_g44629_i0forward_frame_1 - 0.069 13.2 0.4 0.72 9.9 0.1 2.0 1 1 1 2 2 2 0 Glycine-rich SFCGS GAT PF03127.14 NODE_52551_length_339_cov_82.388158_g44629_i0forward_frame_1 - 0.093 13.1 1.7 0.16 12.3 1.7 1.4 1 0 0 1 1 1 0 GAT domain Ole-e-6 PF09253.10 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_1 - 0.062 13.3 1.0 0.25 11.3 1.0 2.1 1 1 0 1 1 1 0 Pollen allergen ole e 6 Saf_2TM PF18303.1 NODE_52549_length_339_cov_88.792763_g44627_i0forward_frame_1 - 0.82 9.3 9.0 0.25 11.0 4.7 1.9 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain Phlebovirus_G1 PF07243.11 NODE_52547_length_339_cov_96.677632_g44625_i0forward_frame_1 - 0.43 8.9 3.1 0.59 8.4 3.1 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 NB PF04159.13 NODE_52547_length_339_cov_96.677632_g44625_i0forward_frame_1 - 0.98 9.5 4.5 0.38 10.8 1.6 1.7 2 0 0 2 2 2 0 NB glycoprotein DUF1096 PF06493.11 NODE_52546_length_339_cov_96.924342_g44624_i0forward_frame_1 - 0.047 14.2 2.3 0.076 13.5 2.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1096) KOW PF00467.29 NODE_52545_length_339_cov_97.450658_g44623_i0forward_frame_1 - 5.3e-06 26.2 1.5 0.00052 19.9 0.2 2.2 2 0 0 2 2 2 2 KOW motif KN17_SH3 PF18131.1 NODE_52545_length_339_cov_97.450658_g44623_i0forward_frame_1 - 0.015 15.4 0.9 2.4 8.3 0.0 2.2 2 0 0 2 2 2 0 KN17 SH3-like C-terminal domain DUF3912 PF13051.6 NODE_52545_length_339_cov_97.450658_g44623_i0forward_frame_1 - 0.093 13.0 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3912) Statherin PF03875.13 NODE_52544_length_339_cov_98.016447_g44622_i0reverse_frame_1 - 0.028 14.5 1.5 0.05 13.7 0.0 2.0 2 0 0 2 2 2 0 Statherin WD40 PF00400.32 NODE_52544_length_339_cov_98.016447_g44622_i0forward_frame_1 - 0.00016 22.4 1.2 0.0027 18.5 0.0 2.5 2 1 0 2 2 2 1 WD domain, G-beta repeat MASE2 PF05230.11 NODE_52537_length_339_cov_138.523026_g44615_i0forward_frame_1 - 0.1 12.7 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MASE2 domain YMF19 PF02326.15 NODE_52536_length_339_cov_139.213816_g44614_i0forward_frame_1 - 0.12 13.1 0.9 0.15 12.8 0.9 1.3 1 0 0 1 1 1 0 Plant ATP synthase F0 PhoLip_ATPase_N PF16209.5 NODE_52532_length_339_cov_226.871711_g40000_i1reverse_frame_1 - 0.1 12.3 1.2 0.18 11.5 0.1 1.9 2 0 0 2 2 2 0 Phospholipid-translocating ATPase N-terminal tRNA-synt_His PF13393.6 NODE_52521_length_340_cov_1.439344_g44600_i0forward_frame_3 - 1.9e-09 37.3 0.0 2.2e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase NTP_transf_7 PF07984.12 NODE_52521_length_340_cov_1.439344_g44600_i0forward_frame_3 - 0.023 14.0 0.7 0.026 13.8 0.7 1.1 1 0 0 1 1 1 0 Nucleotidyltransferase tRNA-synt_2b PF00587.25 NODE_52521_length_340_cov_1.439344_g44600_i0forward_frame_3 - 0.063 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) Cortexin PF11057.8 NODE_52520_length_340_cov_1.531148_g44599_i0forward_frame_2 - 0.06 13.2 1.7 0.08 12.8 1.7 1.2 1 0 0 1 1 1 0 Cortexin of kidney Herpes_LMP1 PF05297.11 NODE_52520_length_340_cov_1.531148_g44599_i0forward_frame_2 - 0.67 9.1 4.0 0.76 8.9 4.0 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) FA_desaturase PF00487.24 NODE_52520_length_340_cov_1.531148_g44599_i0forward_frame_2 - 5 6.9 8.4 6.1 6.6 8.4 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DJ-1_PfpI PF01965.24 NODE_52517_length_340_cov_1.790164_g44596_i0forward_frame_2 - 0.00062 19.6 0.1 0.00075 19.3 0.1 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family Catalase_C PF18011.1 NODE_52517_length_340_cov_1.790164_g44596_i0forward_frame_2 - 0.00088 18.9 0.1 0.001 18.7 0.1 1.1 1 0 0 1 1 1 1 C-terminal domain found in long catalases Pox_EPC_I2-L1 PF12575.8 NODE_52514_length_340_cov_1.954098_g44593_i0reverse_frame_2 - 2.6 8.3 7.2 0.34 11.2 0.7 2.2 1 1 1 2 2 2 0 Poxvirus entry protein complex L1 and I2 ABC_membrane PF00664.23 NODE_52514_length_340_cov_1.954098_g44593_i0forward_frame_2 - 7.4e-11 42.2 15.2 8e-11 42.1 15.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF1430 PF07242.11 NODE_52514_length_340_cov_1.954098_g44593_i0forward_frame_2 - 0.17 12.2 15.1 0.22 11.8 7.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1430) Stevor PF17410.2 NODE_52514_length_340_cov_1.954098_g44593_i0forward_frame_2 - 1.4 8.4 10.7 1.6 8.2 10.7 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF898 PF05987.13 NODE_52513_length_340_cov_1.960656_g44592_i0reverse_frame_3 - 0.00019 20.6 4.2 0.00021 20.4 4.2 1.2 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF898) Usg PF06233.12 NODE_52513_length_340_cov_1.960656_g44592_i0forward_frame_2 - 0.0029 17.7 1.4 0.0051 16.9 1.4 1.3 1 0 0 1 1 1 1 Usg-like family Chordopox_A30L PF06015.12 NODE_52512_length_340_cov_1.983607_g44591_i0forward_frame_3 - 0.029 14.2 1.7 0.029 14.2 1.7 1.7 1 1 1 2 2 2 0 Chordopoxvirus A30L protein GPS PF01825.21 NODE_52512_length_340_cov_1.983607_g44591_i0forward_frame_3 - 0.047 14.2 0.4 0.092 13.3 0.4 1.5 1 0 0 1 1 1 0 GPCR proteolysis site, GPS, motif DUF2400 PF09674.10 NODE_52512_length_340_cov_1.983607_g44591_i0forward_frame_3 - 0.11 12.5 2.3 0.12 12.3 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) Glycos_transf_3 PF00591.21 NODE_52511_length_340_cov_2.029508_g44590_i0forward_frame_2 - 4.5e-53 180.4 0.0 4.9e-53 180.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Vpu PF00558.19 NODE_52509_length_340_cov_2.154098_g44588_i0reverse_frame_2 - 0.0051 16.5 0.1 0.0079 15.9 0.1 1.3 1 0 0 1 1 1 1 Vpu protein ROQ_II PF18386.1 NODE_52509_length_340_cov_2.154098_g44588_i0reverse_frame_2 - 0.033 14.0 0.6 0.071 13.0 0.1 1.8 2 0 0 2 2 2 0 Roquin II domain DUF1084 PF06454.11 NODE_52504_length_340_cov_2.288525_g44583_i0reverse_frame_2 - 0.012 15.0 0.7 0.015 14.7 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DUF4694 PF15765.5 NODE_52498_length_340_cov_2.862295_g44577_i0forward_frame_3 - 0.13 12.2 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) DUF1231 PF06802.11 NODE_52497_length_340_cov_2.950820_g44576_i0forward_frame_2 - 0.002 17.3 5.5 0.0023 17.1 5.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1231) YitT_membrane PF02588.15 NODE_52495_length_340_cov_3.222951_g44574_i0reverse_frame_3 - 0.13 11.6 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks233.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks233.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks233.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks233.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UPF0061 PF02696.14 NODE_52493_length_340_cov_3.593443_g44572_i0reverse_frame_2 - 2e-16 59.9 0.7 2.1e-16 59.8 0.7 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, YdiU/UPF0061 family DUF775 PF05603.12 NODE_52493_length_340_cov_3.593443_g44572_i0reverse_frame_2 - 0.03 13.9 0.0 0.035 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF775) Arg_decarbox_C PF17944.1 NODE_52493_length_340_cov_3.593443_g44572_i0reverse_frame_2 - 0.045 14.3 1.1 1.3 9.6 0.0 2.4 2 1 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension MazE_antitoxin PF04014.18 NODE_52492_length_340_cov_3.649180_g44571_i0reverse_frame_3 - 0.12 12.3 0.2 0.32 11.0 0.2 1.7 1 1 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin DUF1744 PF08490.12 NODE_52492_length_340_cov_3.649180_g44571_i0forward_frame_2 - 0.027 13.1 0.2 0.03 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1744) Titin_Ig-rpts PF06582.12 NODE_52489_length_340_cov_10.803279_g44568_i0reverse_frame_2 - 0.17 11.9 4.6 15 5.6 0.3 3.3 3 0 0 3 3 3 0 Titin repeat CAP18_C PF12153.8 NODE_52489_length_340_cov_10.803279_g44568_i0forward_frame_2 - 0.079 12.8 1.9 9.8 6.1 0.2 2.1 2 0 0 2 2 2 0 LPS binding domain of CAP18 (C terminal) Telomere_res PF16684.5 NODE_52475_length_340_cov_67.829508_g44554_i0reverse_frame_3 - 0.013 15.0 0.0 0.019 14.5 0.0 1.2 1 0 0 1 1 1 0 Telomere resolvase DIPSY PF11763.8 NODE_52475_length_340_cov_67.829508_g44554_i0reverse_frame_2 - 0.028 14.6 1.4 0.031 14.4 1.4 1.1 1 0 0 1 1 1 0 Cell-wall adhesin ligand-binding C-terminal MtrE PF04206.12 NODE_52475_length_340_cov_67.829508_g44554_i0forward_frame_3 - 0.12 11.6 0.9 0.15 11.3 0.9 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit E Arginase PF00491.21 NODE_52470_length_340_cov_90.265574_g44549_i0reverse_frame_2 - 5.3e-09 36.0 0.0 6.1e-09 35.8 0.0 1.0 1 0 0 1 1 1 1 Arginase family DUF413 PF04219.12 NODE_52468_length_340_cov_92.898361_g44547_i0reverse_frame_3 - 0.18 11.9 0.6 0.29 11.2 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF DUF2207 PF09972.9 NODE_52465_length_340_cov_105.095082_g44544_i0forward_frame_2 - 5.2 5.7 6.7 6.2 5.5 6.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Microvir_J PF04726.13 NODE_52464_length_340_cov_119.836066_g44543_i0reverse_frame_2 - 0.13 12.2 1.2 0.22 11.5 0.1 1.9 2 0 0 2 2 2 0 Microvirus J protein Presenilin PF01080.17 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.32 9.7 3.3 0.3 9.8 3.3 1.0 1 0 0 1 1 1 0 Presenilin RNA_pol_Rpc4 PF05132.14 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.46 10.9 6.1 0.53 10.7 6.1 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 AP3D1 PF06375.11 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.57 10.4 19.6 0.74 10.0 19.6 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 CDC45 PF02724.14 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.58 8.4 8.4 0.57 8.4 8.4 1.0 1 0 0 1 1 1 0 CDC45-like protein FAM176 PF14851.6 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.67 9.6 3.6 0.78 9.4 3.6 1.2 1 0 0 1 1 1 0 FAM176 family Zip PF02535.22 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 0.69 9.1 4.9 0.7 9.0 4.9 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Connexin PF00029.19 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 1.2 8.9 6.3 1.2 8.9 6.3 1.1 1 0 0 1 1 1 0 Connexin Sec62 PF03839.16 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 2 7.9 10.1 2 7.8 10.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 NPR3 PF03666.13 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 2.3 6.9 9.2 2.3 6.9 9.2 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Afi1 PF07792.12 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 2.4 8.7 8.0 3 8.3 8.0 1.1 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking Ferlin_C PF16165.5 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 3.1 7.7 8.7 4 7.4 8.7 1.2 1 0 0 1 1 1 0 Ferlin C-terminus Peptidase_S49_N PF08496.10 NODE_52463_length_340_cov_119.963934_g44542_i0reverse_frame_3 - 6.9 6.7 12.6 8.3 6.5 12.6 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Tmemb_55A PF09788.9 NODE_52463_length_340_cov_119.963934_g44542_i0forward_frame_3 - 0.71 8.9 4.7 0.87 8.6 4.7 1.1 1 0 0 1 1 1 0 Transmembrane protein 55A Stevor PF17410.2 NODE_52463_length_340_cov_119.963934_g44542_i0forward_frame_3 - 9.7 5.6 7.3 12 5.4 7.3 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Autophagy_N PF03986.13 NODE_52460_length_340_cov_130.914754_g44539_i0forward_frame_3 - 0.14 12.1 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Autophagocytosis associated protein (Atg3), N-terminal domain DUF840 PF05801.11 NODE_52459_length_340_cov_130.914754_g44538_i0reverse_frame_3 - 0.16 12.0 0.1 0.23 11.5 0.1 1.2 1 0 0 1 1 1 0 Lagovirus protein of unknown function (DUF840) DUF2556 PF10831.8 NODE_52459_length_340_cov_130.914754_g44538_i0reverse_frame_2 - 0.24 11.3 4.5 0.38 10.7 1.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2556) DUF3220 PF11516.8 NODE_52457_length_340_cov_167.147541_g44536_i0forward_frame_2 - 0.15 12.3 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) Amelin PF05111.12 NODE_52455_length_340_cov_170.881967_g44534_i0reverse_frame_2 - 0.057 12.6 6.0 0.064 12.4 6.0 1.1 1 0 0 1 1 1 0 Ameloblastin precursor (Amelin) DUF707 PF05212.12 NODE_52455_length_340_cov_170.881967_g44534_i0reverse_frame_2 - 0.7 9.1 1.9 0.89 8.7 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF707) Ribosomal_60s PF00428.19 NODE_52455_length_340_cov_170.881967_g44534_i0forward_frame_3 - 3.4e-15 56.4 1.6 4.3e-15 56.1 1.6 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein FoP_duplication PF13865.6 NODE_52455_length_340_cov_170.881967_g44534_i0forward_frame_3 - 0.081 13.5 0.7 0.12 12.9 0.7 1.3 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 Tom5 PF10642.9 NODE_52455_length_340_cov_170.881967_g44534_i0forward_frame_3 - 0.13 12.3 0.0 0.77 9.8 0.0 2.0 2 0 0 2 2 2 0 Mitochondrial import receptor subunit or translocase Glyco_transf_10 PF00852.19 NODE_52453_length_340_cov_182.583607_g44532_i0reverse_frame_3 - 0.059 13.1 0.2 0.074 12.8 0.2 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 10 (fucosyltransferase) C-term Cas_Cas02710 PF09670.10 NODE_52453_length_340_cov_182.583607_g44532_i0reverse_frame_3 - 0.07 11.9 0.0 0.081 11.7 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) zf-LSD1 PF06943.12 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.0063 16.3 1.8 0.11 12.3 0.1 3.7 4 0 0 4 4 4 2 LSD1 zinc finger eIF-5_eIF-2B PF01873.17 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.0098 15.8 8.8 0.043 13.7 0.6 2.2 1 1 1 2 2 2 2 Domain found in IF2B/IF5 zinc_ribbon_6 PF14599.6 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 0.011 15.8 8.0 0.025 14.6 0.7 2.7 2 1 1 3 3 3 0 Zinc-ribbon zinc_ribbon_12 PF11331.8 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 2.1 8.2 0.0 2.1 8.2 0.0 3.4 3 1 0 3 3 3 0 Probable zinc-ribbon domain zinc_ribbon_4 PF13717.6 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 5.6 7.0 12.5 7.9 6.5 0.0 3.8 5 0 0 5 5 5 0 zinc-ribbon domain Elf1 PF05129.13 NODE_52449_length_340_cov_222.160656_g44528_i0reverse_frame_2 - 8.4 6.5 9.0 8e+02 0.2 9.0 2.6 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Herpes_BBRF1 PF04793.12 NODE_52447_length_340_cov_361.865574_g44526_i0reverse_frame_3 - 0.087 11.8 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 BRRF1-like protein TgMIC1 PF11476.8 NODE_52446_length_340_cov_1011.334426_g44525_i0reverse_frame_3 - 0.041 13.6 0.2 0.048 13.4 0.2 1.1 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 DUF2093 PF09866.9 NODE_52446_length_340_cov_1011.334426_g44525_i0reverse_frame_3 - 0.12 11.8 0.2 0.26 10.7 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2093) zf-CHC2 PF01807.20 NODE_52446_length_340_cov_1011.334426_g44525_i0forward_frame_3 - 0.088 12.6 0.8 6.3 6.7 0.1 2.1 1 1 0 2 2 2 0 CHC2 zinc finger MKLP1_Arf_bdg PF16540.5 NODE_52446_length_340_cov_1011.334426_g44525_i0forward_frame_2 - 0.19 11.8 2.3 0.32 11.1 1.5 1.9 1 1 0 2 2 2 0 Arf6-interacting domain of mitotic kinesin-like protein 1 VF530 PF09905.9 NODE_52442_length_341_cov_1.071895_g44521_i0reverse_frame_3 - 0.1 12.8 0.0 0.16 12.2 0.0 1.5 1 1 0 1 1 1 0 DNA-binding protein VF530 Thymosin PF01290.20 NODE_52441_length_341_cov_1.392157_g44520_i0forward_frame_2 - 0.055 13.2 0.2 0.091 12.5 0.2 1.2 1 0 0 1 1 1 0 Thymosin beta-4 family DUF3127 PF11325.8 NODE_52440_length_341_cov_1.411765_g44519_i0reverse_frame_2 - 0.05 13.8 0.1 0.071 13.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3127) Denso_VP4 PF02336.15 NODE_52440_length_341_cov_1.411765_g44519_i0reverse_frame_2 - 0.1 11.5 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 Capsid protein VP4 Gpr1_Fun34_YaaH PF01184.19 NODE_52440_length_341_cov_1.411765_g44519_i0forward_frame_2 - 0.27 10.8 4.7 0.25 10.9 3.5 1.5 1 1 1 2 2 2 0 GPR1/FUN34/yaaH family zf-AD PF07776.15 NODE_52438_length_341_cov_1.431373_g44517_i0forward_frame_2 - 2.4 8.5 11.3 11 6.4 8.1 2.7 1 1 1 2 2 2 0 Zinc-finger associated domain (zf-AD) DUF3381 PF11861.8 NODE_52435_length_341_cov_1.715686_g44514_i0reverse_frame_2 - 0.01 15.7 7.9 0.013 15.3 7.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) PGA2 PF07543.12 NODE_52435_length_341_cov_1.715686_g44514_i0reverse_frame_2 - 0.025 14.5 3.4 0.03 14.3 3.4 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 BRF1 PF07741.13 NODE_52435_length_341_cov_1.715686_g44514_i0reverse_frame_2 - 0.037 14.4 0.2 0.037 14.4 0.2 2.8 2 1 0 2 2 2 0 Brf1-like TBP-binding domain ArlS_N PF18719.1 NODE_52434_length_341_cov_1.751634_g44513_i0reverse_frame_3 - 0.051 13.8 2.6 0.06 13.6 2.6 1.1 1 0 0 1 1 1 0 ArlS sensor domain PIG-P PF08510.12 NODE_52431_length_341_cov_1.849673_g44510_i0reverse_frame_3 - 0.87 9.5 6.0 5.4 7.0 5.9 2.0 1 1 0 1 1 1 0 PIG-P RFC1 PF08519.12 NODE_52429_length_341_cov_1.941176_g44508_i0reverse_frame_2 - 0.031 14.5 0.2 0.08 13.1 0.2 1.7 1 1 1 2 2 2 0 Replication factor RFC1 C terminal domain Pex19 PF04614.12 NODE_52429_length_341_cov_1.941176_g44508_i0reverse_frame_2 - 0.052 13.3 0.3 0.061 13.1 0.3 1.1 1 0 0 1 1 1 0 Pex19 protein family RicinB_lectin_2 PF14200.6 NODE_52426_length_341_cov_2.084967_g44505_i0reverse_frame_2 - 4.7e-08 33.7 1.1 0.00056 20.6 0.1 2.1 1 1 0 2 2 2 2 Ricin-type beta-trefoil lectin domain-like SPC22 PF04573.12 NODE_52422_length_341_cov_2.176471_g44501_i0reverse_frame_2 - 0.0021 17.6 0.0 0.0021 17.6 0.0 1.2 1 0 0 1 1 1 1 Signal peptidase subunit Molybdopterin PF00384.22 NODE_52421_length_341_cov_2.179739_g44500_i0reverse_frame_3 - 0.0025 16.8 0.0 0.0028 16.7 0.0 1.2 1 1 0 1 1 1 1 Molybdopterin oxidoreductase VWA_CoxE PF05762.14 NODE_52421_length_341_cov_2.179739_g44500_i0reverse_frame_3 - 0.028 13.8 0.0 0.033 13.6 0.0 1.1 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein SIS PF01380.22 NODE_52421_length_341_cov_2.179739_g44500_i0reverse_frame_3 - 0.13 12.1 0.0 0.29 11.0 0.0 1.5 1 1 1 2 2 2 0 SIS domain DUF4777 PF16007.5 NODE_52412_length_341_cov_2.594771_g44491_i0reverse_frame_2 - 0.028 14.6 0.1 0.054 13.7 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) ORC5_C PF14630.6 NODE_52412_length_341_cov_2.594771_g44491_i0forward_frame_3 - 0.038 13.5 0.6 0.039 13.5 0.6 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus DUF779 PF05610.11 NODE_52410_length_341_cov_2.849673_g44489_i0reverse_frame_2 - 0.18 12.0 0.1 12 6.2 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF779) S1 PF00575.23 NODE_52410_length_341_cov_2.849673_g44489_i0forward_frame_3 - 9.2e-22 77.2 0.4 1.2e-21 76.8 0.4 1.2 1 0 0 1 1 1 1 S1 RNA binding domain PCB_OB PF17092.5 NODE_52410_length_341_cov_2.849673_g44489_i0forward_frame_3 - 0.00031 21.5 0.0 0.00036 21.2 0.0 1.2 1 0 0 1 1 1 1 Penicillin-binding protein OB-like domain S1_2 PF13509.6 NODE_52410_length_341_cov_2.849673_g44489_i0forward_frame_3 - 0.12 12.5 0.5 0.57 10.3 0.5 1.9 1 1 0 1 1 1 0 S1 domain COX7C PF02935.16 NODE_52409_length_341_cov_2.875817_g44488_i0forward_frame_2 - 0.09 13.1 1.1 0.15 12.3 1.1 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc DUF1090 PF06476.12 NODE_52407_length_341_cov_2.921569_g44486_i0reverse_frame_2 - 4.8e-09 36.3 0.2 6e-09 36.0 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1090) Usher PF00577.20 NODE_52406_length_341_cov_2.931373_g44485_i0forward_frame_2 - 1.3e-50 172.8 1.2 1.4e-50 172.7 1.2 1.0 1 0 0 1 1 1 1 Outer membrane usher protein Sigma54_activat PF00158.26 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 2.5e-50 170.5 0.0 2.7e-50 170.3 0.0 1.0 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 5.7e-07 29.7 0.0 1.7e-06 28.2 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 0.00018 21.5 0.0 0.0002 21.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 0.0048 16.3 0.0 0.0064 15.9 0.0 1.1 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 0.038 14.4 0.0 0.045 14.2 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 NODE_52402_length_341_cov_3.307190_g44481_i0forward_frame_2 - 0.064 13.1 0.0 0.076 12.9 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Aldedh PF00171.22 NODE_52401_length_341_cov_3.457516_g44480_i0forward_frame_2 - 0.013 14.0 0.8 0.015 13.9 0.8 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family TPR_1 PF00515.28 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.0094 15.7 0.1 0.025 14.4 0.1 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.012 15.3 0.1 0.026 14.2 0.1 1.6 1 0 0 1 1 1 0 TPR repeat TPR_2 PF07719.17 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.046 13.8 0.4 0.13 12.4 0.1 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat NES_C_h PF18208.1 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.072 13.4 13.6 0.14 12.4 13.6 1.5 1 1 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain TPR_8 PF13181.6 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.096 12.9 3.0 2 8.8 0.0 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF3984 PF13136.6 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 0.3 10.4 3.7 0.34 10.3 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3984) MMtag PF10159.9 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_3 - 9.7 6.6 10.3 0.74 10.1 5.0 1.9 2 1 0 2 2 2 0 Multiple myeloma tumor-associated ubiquitin PF00240.23 NODE_52398_length_341_cov_3.467320_g44477_i0reverse_frame_2 - 0.069 12.9 0.1 0.12 12.1 0.1 1.4 1 0 0 1 1 1 0 Ubiquitin family Imm43 PF15570.6 NODE_52398_length_341_cov_3.467320_g44477_i0forward_frame_2 - 0.09 12.8 3.5 0.093 12.8 2.7 1.4 1 1 0 1 1 1 0 Immunity protein 43 DUF2512 PF10710.9 NODE_52398_length_341_cov_3.467320_g44477_i0forward_frame_2 - 0.82 9.3 8.5 1.2 8.8 8.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2512) Acid_phosphat_B PF03767.14 NODE_52395_length_341_cov_6.689542_g44474_i0forward_frame_2 - 0.024 14.2 0.1 0.031 13.9 0.1 1.2 1 0 0 1 1 1 0 HAD superfamily, subfamily IIIB (Acid phosphatase) Peripla_BP_7 PF18610.1 NODE_52392_length_341_cov_27.513072_g44471_i0reverse_frame_3 - 0.07 13.3 0.2 0.1 12.8 0.2 1.3 1 0 0 1 1 1 0 Periplasmic binding protein domain Pkinase_C PF00433.24 NODE_52392_length_341_cov_27.513072_g44471_i0reverse_frame_3 - 0.083 13.6 4.6 0.14 12.9 4.6 1.4 1 0 0 1 1 1 0 Protein kinase C terminal domain PuR_N PF09182.10 NODE_52392_length_341_cov_27.513072_g44471_i0forward_frame_2 - 0.12 12.3 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal TetR_C_31 PF17940.1 NODE_52390_length_341_cov_45.055556_g44469_i0forward_frame_3 - 0.096 12.9 0.1 0.13 12.5 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF2149 PF09919.9 NODE_52389_length_341_cov_50.973856_g44468_i0reverse_frame_2 - 1.2 9.4 6.6 8.7 6.7 0.5 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2149) DUF2405 PF10293.9 NODE_52389_length_341_cov_50.973856_g44468_i0forward_frame_3 - 0.72 9.8 3.2 0.5 10.3 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF2405) NPCC PF08058.11 NODE_52383_length_341_cov_64.924837_g44462_i0forward_frame_2 - 1.5 8.9 9.2 80 3.3 9.2 2.0 1 1 0 1 1 1 0 Nuclear pore complex component TMEM237 PF15383.6 NODE_52381_length_341_cov_74.601307_g44460_i0reverse_frame_2 - 3.5 6.7 11.6 4.8 6.2 11.6 1.3 1 0 0 1 1 1 0 Transmembrane protein 237 Sel1 PF08238.12 NODE_52380_length_341_cov_74.823529_g44459_i0reverse_frame_3 - 1.9e-08 34.7 0.2 4.4e-08 33.5 0.2 1.6 1 0 0 1 1 1 1 Sel1 repeat EGF PF00008.27 NODE_52374_length_341_cov_96.055556_g44453_i0forward_frame_2 - 0.16 12.3 4.4 0.42 11.0 3.9 2.1 1 1 0 1 1 1 0 EGF-like domain MAR_sialic_bdg PF10564.9 NODE_52367_length_341_cov_174.088235_g44446_i0reverse_frame_3 - 0.0045 17.0 0.3 0.01 15.9 0.1 1.5 1 1 1 2 2 2 1 Sialic-acid binding micronemal adhesive repeat TetR_C_33 PF13305.6 NODE_52367_length_341_cov_174.088235_g44446_i0forward_frame_2 - 0.093 13.5 0.0 0.12 13.2 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Toxin_3 PF00537.18 NODE_52366_length_341_cov_193.045752_g44445_i0reverse_frame_2 - 0.69 10.2 6.5 2.5 8.4 0.2 2.4 2 0 0 2 2 2 0 Scorpion toxin-like domain Gamma-thionin PF00304.20 NODE_52366_length_341_cov_193.045752_g44445_i0reverse_frame_2 - 2.5 8.4 11.8 1.7 9.0 2.4 2.3 2 0 0 2 2 2 0 Gamma-thionin family DUF2809 PF10990.8 NODE_52361_length_341_cov_332.803922_g44440_i0forward_frame_3 - 0.12 13.1 0.1 0.2 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2809) CFC PF09443.10 NODE_52359_length_341_cov_841.875817_g44438_i0forward_frame_2 - 6.6 6.7 10.3 0.19 11.6 0.9 2.9 2 1 1 3 3 3 0 Cripto_Frl-1_Cryptic (CFC) Gag_p24 PF00607.20 NODE_52355_length_342_cov_1.537459_g44434_i0forward_frame_3 - 0.0096 15.8 0.0 0.011 15.6 0.0 1.1 1 0 0 1 1 1 1 gag gene protein p24 (core nucleocapsid protein) Cmc1 PF08583.10 NODE_52355_length_342_cov_1.537459_g44434_i0forward_frame_3 - 0.12 12.4 1.8 0.25 11.4 1.8 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like A-2_8-polyST PF07388.11 NODE_52350_length_342_cov_1.866450_g44429_i0forward_frame_3 - 0.045 12.4 0.9 0.051 12.2 0.9 1.1 1 0 0 1 1 1 0 Alpha-2,8-polysialyltransferase (POLYST) Flp1_like PF16982.5 NODE_52349_length_342_cov_2.013029_g44428_i0reverse_frame_3 - 0.088 12.2 0.1 0.19 11.2 0.1 1.5 1 1 0 1 1 1 0 Putative Flagellin, Flp1-like, domain Guanylate_cyc PF00211.20 NODE_52345_length_342_cov_2.345277_g44424_i0reverse_frame_2 - 0.12 12.0 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Adenylate and Guanylate cyclase catalytic domain DUF1318 PF07027.12 NODE_52343_length_342_cov_2.361564_g44422_i0reverse_frame_2 - 1.6e-18 66.9 1.1 2.2e-18 66.5 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1318) PatG_C PF18065.1 NODE_52343_length_342_cov_2.361564_g44422_i0reverse_frame_2 - 0.1 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 PatG C-terminal DUF2774 PF11242.8 NODE_52343_length_342_cov_2.361564_g44422_i0reverse_frame_2 - 0.1 12.8 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) Sin3_corepress PF08295.12 NODE_52343_length_342_cov_2.361564_g44422_i0forward_frame_3 - 0.012 15.7 0.0 6.4 6.9 0.0 2.1 2 0 0 2 2 2 0 Sin3 family co-repressor 7tm_1 PF00001.21 NODE_52338_length_342_cov_2.902280_g44417_i0reverse_frame_3 - 0.057 12.7 3.6 0.067 12.5 3.6 1.3 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) Kinesin PF00225.23 NODE_52337_length_342_cov_2.902280_g44416_i0forward_frame_3 - 5.9e-18 64.9 0.0 7.3e-18 64.6 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain PP2C PF00481.21 NODE_52333_length_342_cov_3.149837_g44412_i0reverse_frame_2 - 8.2e-24 84.6 0.0 8.9e-24 84.5 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 NODE_52333_length_342_cov_3.149837_g44412_i0reverse_frame_2 - 0.0027 17.4 0.0 0.0031 17.2 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C WD40_alt PF14077.6 NODE_52333_length_342_cov_3.149837_g44412_i0forward_frame_3 - 0.13 12.2 0.1 0.22 11.4 0.1 1.4 1 0 0 1 1 1 0 Alternative WD40 repeat motif NicO PF03824.16 NODE_52333_length_342_cov_3.149837_g44412_i0forward_frame_2 - 0.034 13.5 0.3 0.037 13.4 0.3 1.1 1 0 0 1 1 1 0 High-affinity nickel-transport protein DUF3418 PF11898.8 NODE_52332_length_342_cov_3.179153_g44411_i0forward_frame_3 - 1.3e-10 40.7 0.0 1.5e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) Myb_DNA-binding PF00249.31 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_2 - 7.2e-09 35.7 0.0 1.1e-08 35.1 0.0 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_52327_length_342_cov_4.084691_g44406_i0reverse_frame_2 - 0.031 14.1 1.9 0.034 14.0 0.1 1.9 2 0 0 2 2 2 0 Myb DNA-binding like MFS_1 PF07690.16 NODE_52326_length_342_cov_6.156352_g44405_i0forward_frame_3 - 2.2e-18 66.3 7.3 2.5e-18 66.2 7.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_52326_length_342_cov_6.156352_g44405_i0forward_frame_3 - 7.7e-07 28.3 6.4 8.5e-07 28.2 6.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_3 PF05977.13 NODE_52326_length_342_cov_6.156352_g44405_i0forward_frame_3 - 0.015 13.7 0.4 0.017 13.5 0.4 1.1 1 0 0 1 1 1 0 Transmembrane secretion effector Proton_antipo_N PF00662.20 NODE_52326_length_342_cov_6.156352_g44405_i0forward_frame_3 - 0.017 15.2 1.0 0.031 14.3 0.2 1.8 2 0 0 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF16 PF01519.16 NODE_52323_length_342_cov_27.742671_g44402_i0forward_frame_2 - 0.4 11.2 7.5 0.45 11.0 5.7 1.8 1 1 1 2 2 2 0 Protein of unknown function DUF16 Csm4_C PF17953.1 NODE_52320_length_342_cov_48.143322_g44399_i0reverse_frame_2 - 0.11 12.4 0.2 2.6 8.0 0.0 2.3 1 1 1 2 2 2 0 CRISPR Csm4 C-terminal domain VID27_PH PF17747.1 NODE_52320_length_342_cov_48.143322_g44399_i0forward_frame_2 - 0.011 16.0 0.3 0.013 15.8 0.3 1.1 1 0 0 1 1 1 0 VID27 PH-like domain Hep_core_N PF08290.11 NODE_52313_length_342_cov_60.459283_g44392_i0forward_frame_3 - 0.001 18.9 2.0 0.001 18.9 2.0 2.3 2 1 0 2 2 2 1 Hepatitis core protein, putative zinc finger DDE_Tnp_IS66_C PF13817.6 NODE_52312_length_342_cov_62.967427_g44391_i0reverse_frame_3 - 0.019 15.2 0.0 0.055 13.7 0.0 1.8 2 0 0 2 2 2 0 IS66 C-terminal element GvpG PF05120.12 NODE_52307_length_342_cov_72.951140_g44386_i0forward_frame_2 - 0.077 13.0 0.5 0.12 12.5 0.5 1.2 1 0 0 1 1 1 0 Gas vesicle protein G Svs_4_5_6 PF17381.2 NODE_52304_length_342_cov_76.097720_g44383_i0reverse_frame_3 - 0.12 13.4 4.9 0.15 13.1 4.9 1.1 1 0 0 1 1 1 0 Seminal vesicle secretory proteins 4/5/6 zf-AN1 PF01428.16 NODE_52302_length_342_cov_83.250814_g44381_i0reverse_frame_3 - 3.2 8.0 11.2 0.37 11.0 6.1 2.0 2 0 0 2 2 2 0 AN1-like Zinc finger SBF2 PF12335.8 NODE_52298_length_342_cov_87.208469_g44377_i0forward_frame_3 - 0.089 12.4 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Myotubularin protein Corona_NS2A PF05213.12 NODE_52298_length_342_cov_87.208469_g44377_i0forward_frame_3 - 0.1 11.9 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Coronavirus NS2A protein CdiA_C_tRNase PF18664.1 NODE_52293_length_342_cov_110.465798_g44372_i0reverse_frame_3 - 0.086 13.0 1.6 0.12 12.6 1.6 1.3 1 0 0 1 1 1 0 CdiA C-terminal tRNase domain Pes-10 PF07149.11 NODE_52293_length_342_cov_110.465798_g44372_i0forward_frame_2 - 0.081 12.0 0.1 0.094 11.8 0.1 1.1 1 0 0 1 1 1 0 Pes-10 MAR_sialic_bdg PF10564.9 NODE_52292_length_342_cov_110.602606_g44371_i0forward_frame_2 - 0.19 11.8 4.0 0.3 11.2 4.0 1.3 1 0 0 1 1 1 0 Sialic-acid binding micronemal adhesive repeat DUF2567 PF10821.8 NODE_52290_length_342_cov_117.358306_g44369_i0reverse_frame_3 - 0.084 12.9 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2567) Tfb5 PF06331.12 NODE_52289_length_342_cov_152.338762_g44368_i0reverse_frame_2 - 0.0013 18.6 0.0 0.0018 18.2 0.0 1.1 1 0 0 1 1 1 1 Transcription factor TFIIH complex subunit Tfb5 Peptidase_M29 PF02073.15 NODE_52283_length_342_cov_322.967427_g44362_i0reverse_frame_3 - 0.081 11.7 0.6 0.085 11.6 0.6 1.0 1 0 0 1 1 1 0 Thermophilic metalloprotease (M29) DUF2868 PF11067.8 NODE_52283_length_342_cov_322.967427_g44362_i0reverse_frame_3 - 0.41 10.1 3.3 0.44 10.0 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) Rpn9_C PF18261.1 NODE_52281_length_342_cov_361.423453_g42707_i1reverse_frame_3 - 0.1 12.2 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 Rpn9 C-terminal helix Gb3_synth PF04572.12 NODE_52279_length_342_cov_2339.306189_g44359_i0reverse_frame_3 - 0.083 13.1 1.3 0.1 12.8 1.3 1.1 1 0 0 1 1 1 0 Alpha 1,4-glycosyltransferase conserved region FANCI_HD1 PF14679.6 NODE_52279_length_342_cov_2339.306189_g44359_i0forward_frame_3 - 0.085 12.8 0.8 0.085 12.8 0.8 1.6 2 0 0 2 2 2 0 FANCI helical domain 1 CTK3_C PF12350.8 NODE_52279_length_342_cov_2339.306189_g44359_i0forward_frame_3 - 0.086 13.0 2.8 0.14 12.3 2.8 1.4 1 1 0 1 1 1 0 CTD kinase subunit gamma CTK3 C-terminus Ribosomal_L31e PF01198.19 NODE_52279_length_342_cov_2339.306189_g44359_i0forward_frame_2 - 1.3e-28 99.0 3.2 1.6e-28 98.8 3.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e Vsr PF03852.15 NODE_52279_length_342_cov_2339.306189_g44359_i0forward_frame_2 - 0.02 14.7 0.1 0.034 14.0 0.1 1.4 1 0 0 1 1 1 0 DNA mismatch endonuclease Vsr DUF1117 PF06547.12 ORF98993 - 0.019 15.5 0.2 0.026 15.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) Prefoldin_2 PF01920.20 ORF9835 - 1.7e-13 50.4 10.6 2.1e-13 50.1 10.6 1.1 1 0 0 1 1 1 1 Prefoldin subunit Endonuc_BglI PF14562.6 ORF9835 - 0.007 15.5 0.0 0.0075 15.4 0.0 1.2 1 0 0 1 1 1 1 Restriction endonuclease BglI TAL_effector PF03377.13 ORF96713 - 0.22 11.9 0.0 0.35 11.2 0.0 1.3 1 0 0 1 1 1 0 TAL effector repeat F-box-like_2 PF13013.6 ORF96201 - 0.031 14.3 0.2 0.072 13.1 0.1 1.6 1 1 1 2 2 2 0 F-box-like domain TMEM192 PF14802.6 ORF96201 - 0.091 11.8 0.5 0.1 11.7 0.5 1.1 1 0 0 1 1 1 0 TMEM192 family DUF2208 PF09973.9 ORF96201 - 0.53 9.9 2.8 0.59 9.7 2.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) PAM2 PF07145.15 ORF96201 - 3.2 7.6 5.8 2.3 8.1 0.5 2.9 3 0 0 3 3 3 0 Ataxin-2 C-terminal region Nodulin_late PF07127.11 ORF96201 - 3.7 8.0 5.2 15 6.0 0.4 2.3 2 0 0 2 2 2 0 Late nodulin protein ERM PF00769.19 ORF96147 - 0.026 14.3 5.0 0.031 14.1 5.0 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family DUF4618 PF15397.6 ORF96147 - 0.026 13.9 1.0 0.03 13.7 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) COG2 PF06148.11 ORF96147 - 0.028 14.5 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 TetR_C_3 PF08362.11 ORF96147 - 0.091 12.7 1.0 2.3 8.2 0.1 2.0 1 1 1 2 2 2 0 YcdC-like protein, C-terminal region GTA_holin_3TM PF11351.8 ORF96147 - 0.14 12.7 1.3 0.17 12.4 1.1 1.3 1 1 0 1 1 1 0 Holin of 3TMs, for gene-transfer release Caudo_TAP PF02413.17 ORF96147 - 0.28 11.3 5.1 0.36 11.0 4.8 1.4 1 1 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK CCDC-167 PF15188.6 ORF96147 - 0.28 11.5 3.3 0.24 11.8 1.3 1.8 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF2205 PF10224.9 ORF96147 - 0.94 9.5 8.3 4 7.5 2.3 2.5 1 1 1 2 2 2 0 Short coiled-coil protein FUSC PF04632.12 ORF96147 - 1.2 7.6 6.9 1.3 7.5 6.9 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Mitochondr_Som1 PF11093.8 ORF95810 - 0.16 12.0 1.7 0.21 11.6 1.7 1.5 1 1 0 1 1 1 0 Mitochondrial export protein Som1 PRAI PF00697.22 ORF95385 - 2.7e-20 73.0 0.1 3e-20 72.8 0.1 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Dus PF01207.17 ORF95385 - 0.0013 17.9 0.0 0.0014 17.7 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.15 ORF95385 - 0.004 16.6 1.2 0.005 16.3 1.2 1.1 1 0 0 1 1 1 1 Nitronate monooxygenase TMP-TENI PF02581.17 ORF95385 - 0.0081 15.5 0.1 0.01 15.2 0.1 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase His_biosynth PF00977.21 ORF95385 - 0.018 14.5 0.1 0.02 14.4 0.1 1.2 1 0 0 1 1 1 0 Histidine biosynthesis protein ThiG PF05690.14 ORF95385 - 0.024 13.9 0.8 0.034 13.5 0.8 1.3 1 1 0 1 1 1 0 Thiazole biosynthesis protein ThiG DUF561 PF04481.12 ORF95385 - 0.11 11.6 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF561) TBCA PF02970.16 ORF95185 - 2.2e-16 60.0 4.1 2.6e-16 59.7 4.1 1.2 1 0 0 1 1 1 1 Tubulin binding cofactor A DHR10 PF18595.1 ORF95185 - 0.0062 16.6 3.5 0.0085 16.1 3.5 1.3 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain DUF5474 PF17568.2 ORF94789 - 5.7 7.1 7.8 14 5.8 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5474) PAN_4 PF14295.6 ORF94241 - 0.058 13.3 0.6 8.4 6.4 0.1 2.3 2 0 0 2 2 2 0 PAN domain AadA_C PF18280.1 ORF93931 - 0.082 13.1 0.0 1.1 9.4 0.0 2.0 1 1 1 2 2 2 0 Aminoglycoside adenyltransferase C-terminal domain ERAP1_C PF11838.8 ORF9298 - 7.9e-09 35.5 0.0 9.3e-09 35.2 0.0 1.1 1 0 0 1 1 1 1 ERAP1-like C-terminal domain DUF802 PF05650.11 ORF9298 - 0.23 11.9 3.0 0.69 10.4 0.6 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF802) PPDK_N PF01326.19 ORF92036 - 0.0039 16.5 0.0 0.0039 16.5 0.0 1.0 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TisB_toxin PF13939.6 ORF90509 - 0.18 11.6 0.5 0.32 10.8 0.5 1.3 1 0 0 1 1 1 0 Toxin TisB, type I toxin-antitoxin system CSRNP_N PF16019.5 ORF90363 - 1.6 8.6 9.3 2.1 8.2 9.3 1.3 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus SH PF01445.17 ORF9016 - 5.9 7.0 7.6 11 6.0 3.3 2.4 2 1 0 2 2 2 0 Viral small hydrophobic protein Phage_F PF02305.17 ORF89811 - 0.013 14.3 0.1 0.017 13.9 0.1 1.0 1 0 0 1 1 1 0 Capsid protein (F protein) PRIMA1 PF16101.5 ORF89777 - 0.7 10.0 6.4 1.1 9.4 6.4 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 AIG2_2 PF13772.6 ORF8961 - 0.11 12.9 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 AIG2-like family RE_CfrBI PF09516.10 ORF88661 - 0.019 14.4 0.1 0.025 14.0 0.1 1.1 1 0 0 1 1 1 0 CfrBI restriction endonuclease Ly49 PF08391.10 ORF88661 - 0.064 13.6 0.0 0.068 13.5 0.0 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region Mss4 PF04421.13 ORF88193 - 0.056 13.6 0.4 0.16 12.1 0.1 1.7 1 1 1 2 2 2 0 Mss4 protein NPR1_interact PF15699.5 ORF88193 - 0.086 13.5 2.0 0.12 13.0 2.0 1.2 1 0 0 1 1 1 0 NPR1 interacting DUF3671 PF12420.8 ORF88193 - 6.6 6.9 9.7 3.8 7.6 1.3 2.2 2 0 0 2 2 2 0 Protein of unknown function DuoxA PF10204.9 ORF87885 - 0.017 14.2 0.5 0.019 14.0 0.5 1.3 1 0 0 1 1 1 0 Dual oxidase maturation factor HTH_29 PF13551.6 ORF87404 - 0.052 13.6 0.2 0.11 12.6 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn helix DUF3135 PF11333.8 ORF87096 - 0.19 12.0 0.0 0.28 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) DUF5549 PF17703.1 ORF86662 - 0.072 12.7 0.2 0.074 12.7 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) DUF4432 PF14486.6 ORF86210 - 0.22 10.3 0.0 0.25 10.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4432) SHR-BD PF06650.12 ORF85676 - 0.044 13.1 0.0 0.057 12.8 0.0 1.1 1 0 0 1 1 1 0 SHR-binding domain of vacuolar-sorting associated protein 13 Ank_4 PF13637.6 ORF84562 - 1.4e-17 63.8 1.1 2e-08 34.6 0.3 2.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF84562 - 1.3e-13 51.3 1.0 3.5e-08 33.9 0.2 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF84562 - 3.9e-11 42.9 0.3 5e-06 26.7 0.2 2.8 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF84562 - 8.7e-10 38.0 0.2 3.2e-05 24.0 0.1 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF84562 - 2e-09 37.5 0.5 1e-08 35.2 0.2 2.0 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Shigella_OspC PF06128.11 ORF84562 - 0.044 13.5 0.1 0.076 12.7 0.1 1.5 1 1 0 1 1 1 0 Shigella flexneri OspC protein SOCS PF12610.8 ORF84525 - 0.042 14.2 0.5 7.6 7.0 0.0 2.3 2 0 0 2 2 2 0 Suppressor of cytokine signalling DUF2733 PF10813.8 ORF8334 - 0.14 12.0 1.1 0.14 12.0 1.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2733) Anthrax-tox_M PF09156.10 ORF79576 - 0.01 15.2 0.8 0.01 15.2 0.8 1.1 1 0 0 1 1 1 1 Anthrax toxin lethal factor, middle domain HIN PF02760.15 ORF79525 - 0.056 13.2 0.2 0.22 11.2 0.1 1.9 1 1 1 2 2 2 0 HIN-200/IF120x domain DUF1283 PF06932.11 ORF78886 - 6.5e-42 141.6 6.1 7.7e-42 141.4 6.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1283) Phasin PF05597.11 ORF78886 - 0.038 14.0 2.0 0.051 13.6 2.0 1.2 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) TMA7 PF09072.10 ORF78886 - 0.67 10.8 2.9 0.57 11.1 1.8 1.4 1 1 0 1 1 1 0 Translation machinery associated TMA7 FERM_C PF09380.10 ORF77134 - 0.026 14.9 0.2 0.035 14.5 0.2 1.1 1 0 0 1 1 1 0 FERM C-terminal PH-like domain FOXO-TAD PF16676.5 ORF77043 - 0.071 13.5 8.5 6.1 7.3 0.2 3.8 2 2 2 4 4 4 0 Transactivation domain of FOXO protein family Crisp PF08562.10 ORF77043 - 1.9 9.1 19.5 3.9 8.1 7.6 2.8 1 1 2 3 3 3 0 Crisp Paramecium_SA PF01508.16 ORF77043 - 2.1 8.8 16.4 26 5.3 11.9 2.6 1 1 1 2 2 2 0 Paramecium surface antigen domain KKLCAg1 PF15204.6 ORF76069 - 0.2 11.8 1.5 0.27 11.4 1.5 1.2 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 Herpes_US9 PF06072.11 ORF75898 - 0.071 13.0 0.9 0.19 11.6 0.9 1.8 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 SH PF01445.17 ORF75880 - 5.9 7.0 7.6 11 6.0 3.3 2.4 2 1 0 2 2 2 0 Viral small hydrophobic protein PIH1_CS PF18201.1 ORF75430 - 0.00059 20.2 0.0 0.00087 19.7 0.0 1.4 1 1 0 1 1 1 1 PIH1 CS-like domain DUF4639 PF15479.6 ORF74577 - 0.18 10.7 0.1 0.2 10.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4639) GM_CSF PF01109.17 ORF74523 - 0.017 15.3 0.1 0.018 15.2 0.1 1.2 1 0 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor NAD4L PF06235.11 ORF74203 - 0.032 14.2 0.7 0.052 13.5 0.6 1.4 1 1 0 1 1 1 0 NADH dehydrogenase subunit 4L (NAD4L) RCC1 PF00415.18 ORF72616 - 1.1e-05 26.0 0.0 0.04 14.5 0.0 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF72616 - 1.1e-05 25.1 0.1 1.7e-05 24.5 0.1 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat HMG_box_2 PF09011.10 ORF72079 - 0.077 13.6 0.6 0.11 13.1 0.6 1.3 1 0 0 1 1 1 0 HMG-box domain FUSC-like PF12805.7 ORF72079 - 0.12 11.4 0.2 0.16 11.0 0.2 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Paramecium_SA PF01508.16 ORF70817 - 1.2 9.6 7.4 0.35 11.3 1.8 2.3 2 1 0 2 2 2 0 Paramecium surface antigen domain BCD PF15461.6 ORF70499 - 0.033 13.7 0.7 0.036 13.6 0.7 1.2 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase Leader_CPA1 PF08252.11 ORF6926 - 0.12 11.8 1.3 0.29 10.6 1.3 1.6 1 0 0 1 1 1 0 arg-2/CPA1 leader peptide UB2H PF14814.6 ORF68817 - 0.018 15.1 0.1 0.027 14.5 0.1 1.4 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain Lipoprotein_3 PF00938.17 ORF68817 - 0.022 14.9 0.8 0.036 14.3 0.2 1.6 1 1 1 2 2 2 0 Lipoprotein DUF1840 PF08895.11 ORF68817 - 0.63 10.4 2.7 0.61 10.4 1.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1840) Microvir_lysis PF04517.12 ORF68342 - 0.17 11.8 0.2 0.27 11.2 0.2 1.3 1 0 0 1 1 1 0 Microvirus lysis protein (E), C terminus Cro PF09048.10 ORF68321 - 0.18 11.9 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Cro DUF1631 PF07793.11 ORF67832 - 0.28 9.6 7.2 0.32 9.4 7.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) BIR PF00653.21 ORF669 - 0.0097 16.5 0.2 0.014 16.0 0.2 1.4 1 0 0 1 1 1 1 Inhibitor of Apoptosis domain GrpE PF01025.19 ORF6557 - 1.2e-31 109.6 0.4 1.4e-31 109.4 0.4 1.0 1 0 0 1 1 1 1 GrpE zf-RING_2 PF13639.6 ORF61674 - 1.4e-05 25.3 6.7 2.9e-05 24.3 6.7 1.6 1 0 0 1 1 1 1 Ring finger domain C1_1 PF00130.22 ORF61674 - 2.8e-05 23.9 5.7 6.6e-05 22.7 5.7 1.6 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Zf_RING PF16744.5 ORF61674 - 6.2e-05 23.0 5.8 0.0001 22.4 5.8 1.3 1 0 0 1 1 1 1 KIAA1045 RING finger Zn_ribbon_17 PF17120.5 ORF61674 - 0.00024 20.7 6.1 0.0004 19.9 6.1 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF61674 - 0.00048 20.0 7.6 0.001 18.9 7.6 1.6 1 0 0 1 1 1 1 PHD-finger zf-RING_11 PF17123.5 ORF61674 - 0.0014 18.3 7.8 0.0023 17.6 6.7 2.0 1 1 1 2 2 2 1 RING-like zinc finger C1_2 PF03107.16 ORF61674 - 0.0032 17.7 4.5 0.0069 16.7 4.5 1.6 1 0 0 1 1 1 1 C1 domain SIR2_2 PF13289.6 ORF61674 - 0.0049 17.0 0.0 0.0055 16.8 0.0 1.2 1 0 0 1 1 1 1 SIR2-like domain zf-RING_5 PF14634.6 ORF61674 - 0.0078 16.2 9.2 0.015 15.2 9.2 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-HC5HC2H_2 PF13832.6 ORF61674 - 0.02 15.0 7.2 0.023 14.8 7.2 1.2 1 0 0 1 1 1 0 PHD-zinc-finger like domain Prok-RING_1 PF14446.6 ORF61674 - 0.028 14.4 5.1 0.058 13.3 5.0 1.7 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-RING_4 PF14570.6 ORF61674 - 0.084 12.7 0.5 0.084 12.7 0.5 2.3 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain PHD_4 PF16866.5 ORF61674 - 0.51 10.5 7.2 5.6 7.1 7.2 2.2 1 1 0 1 1 1 0 PHD-finger zf-C3HC4_2 PF13923.6 ORF61674 - 6.3 6.7 10.6 38 4.2 10.6 2.3 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) MBOAT PF03062.19 ORF61458 - 0.08 12.3 0.1 0.09 12.1 0.1 1.0 1 0 0 1 1 1 0 MBOAT, membrane-bound O-acyltransferase family PLAC8 PF04749.17 ORF61458 - 0.36 11.8 7.3 0.39 11.8 5.1 1.8 2 0 0 2 2 2 0 PLAC8 family HgmA PF04209.13 ORF6079 - 0.093 11.4 0.4 0.11 11.1 0.4 1.1 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase zf_UBZ PF18439.1 ORF59543 - 0.004 16.7 0.2 1.1 8.9 0.0 2.4 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger ADK_lid PF05191.14 ORF59543 - 0.0048 16.8 0.9 0.0076 16.2 0.9 1.3 1 0 0 1 1 1 1 Adenylate kinase, active site lid zf-CHY PF05495.12 ORF59543 - 0.02 15.4 0.2 0.028 14.9 0.2 1.2 1 0 0 1 1 1 0 CHY zinc finger DZR PF12773.7 ORF59543 - 0.027 14.5 1.8 3.7 7.6 0.2 2.2 1 1 1 2 2 2 0 Double zinc ribbon HypA PF01155.19 ORF59543 - 0.033 14.2 0.3 0.055 13.5 0.3 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C2H2_4 PF13894.6 ORF59543 - 0.048 14.5 4.6 7.8 7.6 2.1 2.6 2 0 0 2 2 2 0 C2H2-type zinc finger PHD PF00628.29 ORF59543 - 0.074 13.0 1.1 2.7 8.0 0.3 2.2 2 0 0 2 2 2 0 PHD-finger DUF4379 PF14311.6 ORF59543 - 0.093 13.1 0.8 4.4 7.8 0.0 2.2 2 0 0 2 2 2 0 Probable Zinc-ribbon domain zf-C2H2_6 PF13912.6 ORF59543 - 0.11 12.5 0.5 0.11 12.5 0.5 3.2 4 0 0 4 4 4 0 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF59543 - 0.43 11.1 7.2 0.52 10.9 0.3 3.1 2 1 0 2 2 2 0 Zinc finger, C2H2 type zf-C2HC_2 PF13913.6 ORF59543 - 8.5 6.4 10.0 2.9 7.9 4.2 2.6 2 1 0 2 2 2 0 zinc-finger of a C2HC-type DUF4964 PF16334.5 ORF57101 - 0.17 11.4 0.0 0.25 10.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4964) Herpes_LMP1 PF05297.11 ORF56958 - 2.8 7.1 4.3 3.1 6.9 4.3 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF3350 PF11830.8 ORF54258 - 0.04 14.2 6.1 0.11 12.8 0.8 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3350) OAF PF14941.6 ORF53038 - 0.06 12.8 0.1 0.068 12.6 0.1 1.1 1 0 0 1 1 1 0 Transcriptional regulator, Out at first pP_pnuc_2 PF18166.1 ORF53025 - 0.12 12.4 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease DUF5634_N PF18672.1 ORF52980 - 0.03 14.1 0.1 0.042 13.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5634) FUSC PF04632.12 ORF52398 - 0.06 11.9 2.0 0.064 11.8 2.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DEFB136 PF17333.2 ORF52283 - 0.41 10.6 12.9 1.6 8.8 5.4 2.8 2 1 1 3 3 3 0 Beta defensin 136 Macoilin PF09726.9 ORF52244 - 0.015 13.9 10.8 0.015 13.9 10.8 1.0 1 0 0 1 1 1 0 Macoilin family BET PF17035.5 ORF51343 - 6.5e-09 35.8 8.9 1.1e-08 35.1 8.9 1.4 1 0 0 1 1 1 1 Bromodomain extra-terminal - transcription regulation # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks234.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks234.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks234.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks234.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RabGAP-TBC PF00566.18 ORF51342 - 5.7e-29 101.3 1.3 6e-29 101.2 1.3 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DegS PF05384.11 ORF51342 - 0.048 13.1 0.1 0.066 12.7 0.1 1.1 1 0 0 1 1 1 0 Sensor protein DegS PKcGMP_CC PF16808.5 ORF48136 - 0.0044 16.8 1.9 0.008 16.0 0.2 2.4 2 1 0 2 2 2 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Cep57_MT_bd PF06657.13 ORF48136 - 0.0046 17.4 1.6 0.0046 17.4 1.6 2.1 1 1 1 2 2 2 1 Centrosome microtubule-binding domain of Cep57 Wzz PF02706.15 ORF48136 - 0.012 15.9 0.9 0.2 12.0 0.0 2.1 1 1 1 2 2 2 0 Chain length determinant protein DUF3386 PF11866.8 ORF48136 - 0.018 14.5 0.4 0.022 14.3 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3386) GM_CSF PF01109.17 ORF48136 - 0.021 15.0 1.1 0.024 14.8 1.1 1.2 1 0 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor GAS PF13851.6 ORF48136 - 0.042 13.2 15.0 0.053 12.9 15.0 1.1 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding DUF641 PF04859.12 ORF48136 - 0.57 10.5 7.9 0.11 12.8 3.9 1.8 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF3450 PF11932.8 ORF48136 - 0.95 8.7 9.9 0.36 10.1 2.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 ORF48136 - 5.2 6.5 9.3 5.6 6.4 9.3 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit RunxI PF08504.11 ORF47728 - 0.11 13.2 0.0 0.2 12.4 0.0 1.4 2 0 0 2 2 2 0 Runx inhibition domain Comm PF15957.5 ORF47236 - 0.081 13.3 2.5 0.1 12.9 2.5 1.2 1 0 0 1 1 1 0 Commissureless DUF4342 PF14242.6 ORF43877 - 0.47 10.5 2.0 0.69 9.9 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) HEAT PF02985.22 ORF43725 - 1.9 8.9 5.2 2.4 8.6 0.0 3.1 3 1 0 3 3 3 0 HEAT repeat BCD PF15461.6 ORF41854 - 0.033 13.7 0.7 0.036 13.6 0.7 1.2 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase DUF4950 PF16308.5 ORF41775 - 0.023 14.7 1.8 0.025 14.6 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4950) Mitofilin PF09731.9 ORF41775 - 0.32 9.8 9.3 0.37 9.6 9.3 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein SurA_N_2 PF13623.6 ORF41775 - 0.9 9.4 8.2 8.1 6.3 8.2 2.1 1 1 0 1 1 1 0 SurA N-terminal domain MORN PF02493.20 ORF41416 - 3e-09 36.2 5.8 6.7e-06 25.7 0.2 3.0 2 1 0 3 3 3 2 MORN repeat gag_pre-integrs PF13976.6 ORF39364 - 0.11 12.4 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 GAG-pre-integrase domain Chi-conotoxin PF16981.5 ORF388 - 0.0013 19.0 1.0 0.74 10.1 0.2 2.5 2 0 0 2 2 2 2 chi-Conotoxin or t superfamily DUF3149 PF11346.8 ORF388 - 0.067 12.8 0.8 8.2 6.1 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) Bac_DNA_binding PF00216.21 ORF38195 - 6.7e-13 48.7 2.1 8.8e-13 48.3 2.1 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF38195 - 0.062 13.3 0.6 0.097 12.7 0.6 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal HK_sensor PF16750.5 ORF37364 - 0.11 12.7 0.2 0.2 12.0 0.2 1.4 1 1 0 1 1 1 0 Sensor domain of 2-component histidine kinase zf-MIZ PF02891.20 ORF3595 - 0.034 13.9 0.4 0.069 12.9 0.4 1.4 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger DUF883 PF05957.13 ORF35627 - 6.5e-25 87.6 1.0 7.8e-25 87.3 1.0 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) Activator-TraM PF11657.8 ORF35627 - 0.0016 18.3 0.1 0.0018 18.1 0.1 1.2 1 0 0 1 1 1 1 Transcriptional activator TraM ApoLp-III PF07464.11 ORF35627 - 0.027 14.6 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DUF305 PF03713.13 ORF35627 - 0.036 14.2 0.3 0.042 14.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF305) YtxH PF12732.7 ORF35627 - 0.3 11.6 5.5 0.65 10.6 0.7 2.8 2 1 1 3 3 3 0 YtxH-like protein RNA_pol_Rpb4 PF03874.16 ORF35337 - 6.6e-09 36.2 1.0 8e-09 35.9 1.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 RNA_pol_Rpb2_4 PF04566.13 ORF35155 - 0.34 11.2 1.6 0.6 10.4 1.6 1.5 1 1 0 1 1 1 0 RNA polymerase Rpb2, domain 4 Sep15_SelM PF08806.11 ORF34088 - 2.9e-20 72.2 0.1 3.6e-20 71.9 0.1 1.1 1 0 0 1 1 1 1 Sep15/SelM redox domain Nudix_hydro PF18290.1 ORF34034 - 0.051 13.6 0.0 0.07 13.1 0.0 1.4 1 0 0 1 1 1 0 Nudix hydrolase domain VSG_B PF13206.6 ORF33518 - 0.11 11.8 0.1 0.11 11.7 0.1 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain DUF4495 PF14906.6 ORF33064 - 0.12 11.4 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4495) DnaJ PF00226.31 ORF33016 - 0.0093 16.1 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain Pho88 PF10032.9 ORF31893 - 1.7e-25 89.3 0.0 1.8e-25 89.3 0.0 1.0 1 0 0 1 1 1 1 Phosphate transport (Pho88) Ribosomal_S30AE PF02482.19 ORF31315 - 7.4e-22 77.9 0.0 8.9e-22 77.7 0.0 1.1 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein DUF1690 PF07956.11 ORF31315 - 0.02 15.3 0.1 0.032 14.6 0.1 1.3 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) AidB_N PF18158.1 ORF31208 - 0.031 14.2 0.1 0.031 14.2 0.1 1.1 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain TisB_toxin PF13939.6 ORF30745 - 0.18 11.6 0.5 0.32 10.8 0.5 1.3 1 0 0 1 1 1 0 Toxin TisB, type I toxin-antitoxin system WD40 PF00400.32 ORF30703 - 0.012 16.4 0.2 0.053 14.4 0.1 2.0 2 0 0 2 2 2 0 WD domain, G-beta repeat PHD_4 PF16866.5 ORF30 - 0.041 14.0 2.9 4.3 7.5 0.2 2.2 2 0 0 2 2 2 0 PHD-finger GGACT PF06094.12 ORF26608 - 6.3e-25 88.1 0.1 7.1e-25 88.0 0.1 1.0 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like Vta1 PF04652.16 ORF25989 - 0.003 17.6 1.3 0.004 17.1 1.3 1.2 1 0 0 1 1 1 1 Vta1 like LAGLIDADG_WhiA PF14527.6 ORF25989 - 0.67 10.1 4.1 1.3 9.2 0.8 2.1 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain Slp PF03843.13 ORF25816 - 0.012 15.0 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein Slp family PRR18 PF15671.5 ORF25360 - 0.68 9.8 9.0 0.44 10.4 7.2 1.5 1 1 1 2 2 2 0 Proline-rich protein family 18 FOLN PF09289.10 ORF24603 - 0.94 9.7 3.8 11 6.3 1.6 2.8 2 0 0 2 2 2 0 Follistatin/Osteonectin-like EGF domain Herpes_LMP1 PF05297.11 ORF22625 - 2.8 7.1 4.3 3.1 6.9 4.3 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) ABC2_membrane PF01061.24 ORF21797 - 7.9e-20 71.2 8.8 9.4e-20 70.9 8.8 1.0 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF21797 - 7.5e-07 28.6 7.0 8.2e-07 28.4 7.0 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein CBP_BcsG PF11658.8 ORF20447 - 0.016 13.6 0.1 0.016 13.6 0.1 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG CENP-M PF11111.8 ORF19391 - 0.066 12.4 0.7 0.074 12.2 0.7 1.3 1 0 0 1 1 1 0 Centromere protein M (CENP-M) Comm PF15957.5 ORF19130 - 0.081 13.3 2.5 0.1 12.9 2.5 1.2 1 0 0 1 1 1 0 Commissureless DUF4322 PF14210.6 ORF19090 - 0.075 12.9 0.1 0.15 11.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) Merozoite_SPAM PF07133.11 ORF19090 - 0.39 10.7 0.6 0.54 10.2 0.6 1.2 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) Zn_ribbon_SprT PF17283.2 ORF17600 - 3.2 7.8 10.1 12 5.9 0.8 3.6 3 1 0 3 3 3 0 SprT-like zinc ribbon domain VPDSG-CTERM PF18205.1 ORF16072 - 1 9.2 6.8 4.6 7.2 3.1 2.5 2 0 0 2 2 2 0 VPDSG-CTERM motif zf-CCCH_6 PF18585.1 ORF151703 - 0.064 13.1 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 SCP1201-deam PF14428.6 ORF15027 - 0.077 12.9 0.3 0.092 12.6 0.3 1.2 1 0 0 1 1 1 0 SCP1.201-like deaminase Response_reg PF00072.24 ORF15021 - 9.5e-16 58.0 0.0 1.1e-15 57.8 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Annexin_like PF18411.1 ORF148744 - 0.045 14.0 0.3 0.071 13.4 0.2 1.4 1 1 0 1 1 1 0 Annexin-like domain Rad54_N PF08658.10 ORF148744 - 0.22 11.7 5.2 0.058 13.6 2.7 1.3 2 0 0 2 2 2 0 Rad54 N terminal Cm_res_leader PF08077.11 ORF148399 - 0.11 12.6 0.0 0.44 10.8 0.0 2.1 2 0 0 2 2 2 0 Chloramphenicol resistance gene leader peptide Dermcidin PF15291.6 ORF147756 - 0.04 14.5 0.3 0.055 14.0 0.3 1.3 1 1 0 1 1 1 0 Dermcidin, antibiotic peptide Protamine_like PF06382.11 ORF147756 - 0.051 13.8 2.6 0.051 13.7 2.0 1.4 1 1 0 1 1 1 0 Protamine and protamine like T2SSC PF11356.8 ORF147756 - 0.081 12.8 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 Type II secretion system protein C Rota_VP2 PF05087.12 ORF146143 - 0.62 8.1 5.5 0.66 8.0 5.5 1.0 1 0 0 1 1 1 0 Rotavirus VP2 protein Usg PF06233.12 ORF145821 - 0.16 12.1 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 Usg-like family DNA_pol_delta_4 PF04081.13 ORF14477 - 8e-18 65.0 0.1 9.9e-18 64.7 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase delta, subunit 4 PUMA PF15826.5 ORF144631 - 0.94 9.6 5.4 4.9 7.3 5.2 1.8 1 1 0 1 1 1 0 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis Defensin_int PF17858.1 ORF144314 - 0.0018 18.2 0.5 0.0018 18.2 0.5 2.3 2 1 0 2 2 2 1 Platypus intermediate defensin-like peptide DNA_pol_delta_4 PF04081.13 ORF143762 - 0.28 11.5 0.7 0.53 10.6 0.7 1.5 1 1 1 2 2 2 0 DNA polymerase delta, subunit 4 FDX-ACB PF03147.14 ORF142773 - 0.075 13.5 0.1 0.1 13.1 0.1 1.2 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain RPAP1_N PF08621.10 ORF142773 - 0.13 12.0 4.2 0.76 9.6 1.8 2.2 1 1 1 2 2 2 0 RPAP1-like, N-terminal PP_kinase_C PF13090.6 ORF141948 - 0.018 14.5 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain 2 CRISPR_Cas6 PF10040.9 ORF140318 - 0.053 14.2 0.1 0.085 13.5 0.0 1.5 1 1 0 1 1 1 0 CRISPR-associated endoribonuclease Cas6 KKLCAg1 PF15204.6 ORF139179 - 0.2 11.8 1.5 0.27 11.4 1.5 1.2 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 Kelch_5 PF13854.6 ORF136873 - 0.0013 18.7 0.0 0.0022 18.0 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 ORF136873 - 0.0061 16.8 0.1 0.027 14.7 0.0 1.9 2 0 0 2 2 2 1 Kelch motif Kelch_2 PF07646.15 ORF136873 - 0.055 13.5 0.2 1.3 9.1 0.0 2.2 2 0 0 2 2 2 0 Kelch motif Kelch_3 PF13415.6 ORF136873 - 0.49 10.7 1.7 13 6.2 0.1 2.6 3 0 0 3 3 3 0 Galactose oxidase, central domain Prefoldin PF02996.17 ORF136726 - 0.019 14.9 12.7 0.14 12.0 12.7 1.9 1 1 0 1 1 1 0 Prefoldin subunit ZapB PF06005.12 ORF136726 - 0.33 11.4 20.3 0.22 12.0 6.0 2.2 1 1 1 2 2 2 0 Cell division protein ZapB Prominin PF05478.11 ORF136726 - 0.61 8.0 7.5 0.67 7.8 7.5 1.1 1 0 0 1 1 1 0 Prominin YabA PF06156.13 ORF136726 - 2.8 8.7 15.4 0.099 13.3 5.2 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF3347 PF11827.8 ORF136726 - 8.9 6.5 9.7 7 6.8 5.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) Rab5ip PF07019.12 ORF13525 - 6.1e-17 62.0 8.6 7.1e-17 61.8 8.6 1.1 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) Caenor_Her-1 PF09232.10 ORF134768 - 0.015 15.4 0.3 0.017 15.2 0.3 1.1 1 0 0 1 1 1 0 Caenorhabditis elegans Her-1 Phage_T4_Gp30_7 PF06919.11 ORF134768 - 0.12 12.5 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Phage Gp30.7 protein DEAD_2 PF06733.15 ORF134532 - 0.058 13.0 0.6 0.064 12.9 0.1 1.4 2 0 0 2 2 2 0 DEAD_2 HEAT_2 PF13646.6 ORF134462 - 2.3e-08 34.3 0.0 3.4e-06 27.4 0.0 2.0 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF134462 - 0.0009 19.3 0.3 1.5 9.3 0.0 3.3 3 1 0 3 3 3 2 HEAT repeat HEAT_PBS PF03130.16 ORF134462 - 0.00093 19.7 0.0 1.5 9.7 0.0 3.2 3 0 0 3 3 3 1 PBS lyase HEAT-like repeat US6 PF17616.2 ORF133383 - 0.13 12.2 2.3 0.32 10.9 0.6 2.2 2 1 0 2 2 2 0 Viral unique short region 6 IncFII_repA PF02387.15 ORF131809 - 0.11 11.7 0.7 17 4.5 0.0 2.7 1 1 2 3 3 3 0 IncFII RepA protein family LSM PF01423.22 ORF131421 - 0.00023 20.8 0.0 0.00031 20.4 0.0 1.3 1 0 0 1 1 1 1 LSM domain Dehalogenase PF13486.6 ORF130999 - 0.18 11.2 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 Reductive dehalogenase subunit HTH_Crp_2 PF13545.6 ORF130995 - 0.097 12.7 0.1 0.26 11.3 0.2 1.6 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain DHBP_synthase PF00926.19 ORF129593 - 0.089 12.3 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 3,4-dihydroxy-2-butanone 4-phosphate synthase Asp PF00026.23 ORF128606 - 4.8e-07 29.5 0.1 6.1e-07 29.2 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF128606 - 0.0016 18.7 0.0 0.0026 18.0 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF128606 - 0.006 16.3 0.0 0.0072 16.0 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight S layer protein N terminal Snurportin1 PF11538.8 ORF12753 - 0.036 14.3 0.2 0.088 13.0 0.2 1.7 1 0 0 1 1 1 0 Snurportin1 FOLN PF09289.10 ORF127328 - 0.94 9.7 3.8 11 6.3 1.6 2.8 2 0 0 2 2 2 0 Follistatin/Osteonectin-like EGF domain LEP503 PF15221.6 ORF12693 - 9.8 6.6 8.6 2.5 8.5 5.5 1.8 1 1 0 1 1 1 0 Lens epithelial cell protein LEP503 MANEC PF07502.14 ORF124977 - 0.033 14.4 0.0 0.045 14.0 0.0 1.2 1 0 0 1 1 1 0 MANEC domain Fer4_20 PF14691.6 ORF124977 - 0.11 12.2 0.3 0.11 12.2 0.3 1.4 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster P4Ha_N PF08336.11 ORF124053 - 0.062 13.3 2.1 0.39 10.7 2.1 2.0 1 1 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region TisB_toxin PF13939.6 ORF124053 - 0.25 11.2 0.8 0.45 10.3 0.8 1.4 1 0 0 1 1 1 0 Toxin TisB, type I toxin-antitoxin system zinc_ribbon_15 PF17032.5 ORF123462 - 0.032 15.0 2.2 0.39 11.5 2.2 2.2 1 1 0 1 1 1 0 zinc-ribbon family PRAI PF00697.22 ORF123187 - 2.7e-20 73.0 0.1 3e-20 72.8 0.1 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Dus PF01207.17 ORF123187 - 0.0013 17.9 0.0 0.0014 17.7 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.15 ORF123187 - 0.004 16.6 1.2 0.005 16.3 1.2 1.1 1 0 0 1 1 1 1 Nitronate monooxygenase TMP-TENI PF02581.17 ORF123187 - 0.0081 15.5 0.1 0.01 15.2 0.1 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase His_biosynth PF00977.21 ORF123187 - 0.018 14.5 0.1 0.02 14.4 0.1 1.2 1 0 0 1 1 1 0 Histidine biosynthesis protein ThiG PF05690.14 ORF123187 - 0.024 13.9 0.8 0.034 13.5 0.8 1.3 1 1 0 1 1 1 0 Thiazole biosynthesis protein ThiG DUF561 PF04481.12 ORF123187 - 0.11 11.6 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Sm_multidrug_ex PF06695.11 ORF121451 - 2.6 8.7 4.0 1.9 9.1 0.8 1.9 2 0 0 2 2 2 0 Putative small multi-drug export protein Phi_1 PF04674.12 ORF120559 - 0.95 8.7 5.2 1.1 8.5 5.2 1.2 1 0 0 1 1 1 0 Phosphate-induced protein 1 conserved region Pkinase PF00069.25 ORF120019 - 3.5e-25 88.9 1.6 3.8e-25 88.7 1.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF120019 - 2.1e-12 46.9 0.6 2.3e-12 46.8 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Phage_rep_org_N PF09681.10 ORF120013 - 0.079 12.9 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) FERM_C PF09380.10 ORF119316 - 0.026 14.9 0.2 0.035 14.5 0.2 1.1 1 0 0 1 1 1 0 FERM C-terminal PH-like domain GspL_C PF12693.7 ORF118474 - 0.14 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 GspL periplasmic domain Pkinase PF00069.25 ORF118356 - 3.5e-25 88.9 1.6 3.8e-25 88.7 1.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF118356 - 2.1e-12 46.9 0.6 2.3e-12 46.8 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase TAL_effector PF03377.13 ORF116592 - 0.22 11.9 0.0 0.35 11.2 0.0 1.3 1 0 0 1 1 1 0 TAL effector repeat DUF1138 PF06592.13 ORF115984 - 0.0086 16.1 0.2 0.013 15.5 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1138) CbiG_mid PF11761.8 ORF114949 - 0.14 12.3 0.0 0.22 11.7 0.0 1.4 1 1 0 1 1 1 0 Cobalamin biosynthesis central region MAM33 PF02330.16 ORF114234 - 0.0036 17.3 1.2 0.004 17.1 1.2 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein CpXC PF14353.6 ORF114234 - 0.056 13.5 0.3 0.092 12.8 0.3 1.4 1 0 0 1 1 1 0 CpXC protein RBFA PF02033.18 ORF114022 - 0.01 16.3 0.0 0.014 15.8 0.0 1.2 1 0 0 1 1 1 0 Ribosome-binding factor A EloA-BP1 PF15870.5 ORF113352 - 0.33 11.2 6.2 0.47 10.7 0.8 2.0 1 1 1 2 2 2 0 ElonginA binding-protein 1 GIY-YIG PF01541.24 ORF113148 - 5.2e-13 49.1 0.0 6.4e-13 48.8 0.0 1.1 1 0 0 1 1 1 1 GIY-YIG catalytic domain Mus7 PF09462.10 ORF1131 - 0.083 11.7 0.6 0.092 11.6 0.6 1.1 1 0 0 1 1 1 0 Mus7/MMS22 family K1 PF02960.14 ORF111906 - 0.1 12.7 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 K1 glycoprotein MDFI PF15316.6 ORF111906 - 0.64 10.1 3.2 0.78 9.8 3.2 1.2 1 0 0 1 1 1 0 MyoD family inhibitor RunxI PF08504.11 ORF111386 - 0.11 13.2 0.0 0.2 12.4 0.0 1.4 2 0 0 2 2 2 0 Runx inhibition domain GBR2_CC PF18455.1 ORF111364 - 0.14 12.3 0.4 0.32 11.1 0.4 1.6 1 0 0 1 1 1 0 Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain Clr5 PF14420.6 ORF111364 - 1.2 9.4 5.2 5.5 7.3 1.4 2.2 1 1 1 2 2 2 0 Clr5 domain P4Ha_N PF08336.11 ORF110593 - 0.062 13.3 2.1 0.39 10.7 2.1 2.0 1 1 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region TisB_toxin PF13939.6 ORF110593 - 0.25 11.2 0.8 0.45 10.3 0.8 1.4 1 0 0 1 1 1 0 Toxin TisB, type I toxin-antitoxin system Abhydrolase_1 PF00561.20 ORF110363 - 0.005 16.5 0.0 0.0053 16.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF110363 - 0.0062 15.8 0.0 0.0073 15.6 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF110363 - 0.086 13.4 0.1 0.094 13.3 0.1 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family PemK_toxin PF02452.17 ORF109954 - 0.043 14.2 0.5 0.1 13.0 0.3 1.8 1 1 0 1 1 1 0 PemK-like, MazF-like toxin of type II toxin-antitoxin system CCDC106 PF15794.5 ORF107927 - 0.0066 16.2 0.8 0.0066 16.2 0.8 1.4 1 1 0 1 1 1 1 Coiled-coil domain-containing protein 106 HALZ PF02183.18 ORF107927 - 0.11 12.7 5.5 0.83 9.9 5.5 2.1 1 1 0 1 1 1 0 Homeobox associated leucine zipper DUF585 PF04522.12 ORF107927 - 0.15 11.6 0.0 0.19 11.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF585) DUF2330 PF10092.9 ORF107927 - 0.15 11.1 0.0 0.17 10.9 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2330) Myc-LZ PF02344.15 ORF107927 - 0.7 10.0 2.9 2.8 8.1 0.4 2.3 2 0 0 2 2 2 0 Myc leucine zipper domain Bac_DNA_binding PF00216.21 ORF106287 - 6.7e-13 48.7 2.1 8.8e-13 48.3 2.1 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF106287 - 0.062 13.3 0.6 0.097 12.7 0.6 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal TPP_enzyme_C PF02775.21 ORF106091 - 4.8e-08 32.9 0.0 5.8e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Rep_fac-A_3 PF08661.11 ORF105877 - 5.9e-11 42.6 0.2 6.6e-11 42.5 0.2 1.0 1 0 0 1 1 1 1 Replication factor A protein 3 SP_C-Propep PF08999.10 ORF10360 - 3.8 7.4 7.2 5.7 6.8 7.0 1.5 1 1 0 1 1 1 0 Surfactant protein C, N terminal propeptide UQ_con PF00179.26 ORF102802 - 1.9e-06 27.5 0.0 2.6e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Enolase_C PF00113.22 ORF102802 - 0.1 11.8 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Enolase, C-terminal TIM barrel domain FNIP PF05725.12 ORF102646 - 8.1e-32 109.1 11.2 2e-14 53.5 0.2 2.9 2 1 1 3 3 3 3 FNIP Repeat Glyco_hydro_65C PF03633.15 ORF102646 - 0.01 15.8 1.0 35 4.4 0.0 4.0 4 0 0 4 4 4 0 Glycosyl hydrolase family 65, C-terminal domain LRR_5 PF13306.6 ORF102646 - 0.02 14.9 0.2 0.026 14.5 0.2 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) LRR_11 PF18831.1 ORF102646 - 7.7 6.2 16.7 32 4.2 0.4 4.5 4 0 0 4 4 4 0 Leucine-rich repeat Herpes_glycoH_C PF17488.2 ORF100709 - 0.034 14.0 0.1 0.041 13.7 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein H C-terminal domain Tubulin PF00091.25 NODE_53124_length_334_cov_1.284281_g45199_i0forward_frame_1 - 2.7e-39 135.4 0.0 2.9e-39 135.3 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 NODE_53124_length_334_cov_1.284281_g45199_i0forward_frame_1 - 0.0042 16.8 0.0 0.0042 16.8 0.0 1.1 1 0 0 1 1 1 1 Tubulin domain Tubulin_2 PF13809.6 NODE_53124_length_334_cov_1.284281_g45199_i0forward_frame_1 - 0.013 14.7 0.0 0.015 14.5 0.0 1.1 1 0 0 1 1 1 0 Tubulin like GCM PF03615.15 NODE_53120_length_334_cov_1.361204_g45195_i0reverse_frame_1 - 0.025 14.4 3.3 0.039 13.9 3.3 1.3 1 0 0 1 1 1 0 GCM motif protein DUF2457 PF10446.9 NODE_53120_length_334_cov_1.361204_g45195_i0reverse_frame_1 - 0.77 8.8 4.4 0.91 8.6 4.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) GSG-1 PF07803.11 NODE_53120_length_334_cov_1.361204_g45195_i0reverse_frame_1 - 1.3 9.0 4.9 2.2 8.2 4.8 1.5 1 1 0 1 1 1 0 GSG1-like protein NTP_transferase PF00483.23 NODE_53117_length_334_cov_1.458194_g45192_i0reverse_frame_1 - 6.2e-20 71.8 0.0 6.8e-20 71.7 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase DUF5508 PF17621.2 NODE_53114_length_334_cov_1.551839_g45189_i0forward_frame_1 - 0.03 13.5 0.4 0.036 13.2 0.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5508) DUF3496 PF12001.8 NODE_53113_length_334_cov_1.645485_g45188_i0reverse_frame_1 - 0.082 13.3 0.2 0.11 12.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) DUF3785 PF12653.7 NODE_53110_length_334_cov_1.779264_g45185_i0forward_frame_1 - 0.091 12.9 5.2 0.069 13.3 3.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3785) Pertactin PF03212.14 NODE_53105_length_334_cov_2.013378_g45180_i0reverse_frame_1 - 1.6e-06 28.1 0.1 2e-06 27.8 0.1 1.1 1 0 0 1 1 1 1 Pertactin Biopterin_H PF00351.21 NODE_53104_length_334_cov_2.046823_g45179_i0reverse_frame_1 - 1.4e-51 175.5 0.1 1.5e-51 175.4 0.1 1.0 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase C_tripleX PF02363.19 NODE_53086_length_334_cov_2.715719_g45161_i0forward_frame_1 - 8.8 6.9 16.8 0.35 11.2 9.4 2.6 3 0 0 3 3 3 0 Cysteine rich repeat DivIC PF04977.15 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_1 - 0.0016 18.2 5.9 0.0023 17.7 0.7 2.1 2 0 0 2 2 2 1 Septum formation initiator GP57 PF17594.2 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_1 - 0.082 12.7 0.8 0.66 9.8 0.1 2.2 1 1 1 2 2 2 0 Phage Tail fiber assembly helper gene product 57 NRBF2 PF08961.10 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_1 - 0.36 10.4 5.8 1.3 8.6 5.7 1.8 1 1 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator YabA PF06156.13 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_1 - 1.2 9.8 9.6 3.3 8.4 2.0 2.0 1 1 1 2 2 2 0 Initiation control protein YabA BCCT PF02028.17 NODE_53073_length_334_cov_22.923077_g45148_i0forward_frame_1 - 0.041 12.3 3.0 0.045 12.2 3.0 1.1 1 0 0 1 1 1 0 BCCT, betaine/carnitine/choline family transporter BBL5 PF07289.11 NODE_53072_length_334_cov_40.163880_g45147_i0reverse_frame_1 - 0.024 13.7 0.1 0.026 13.6 0.1 1.1 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein DUF4787 PF16029.5 NODE_53072_length_334_cov_40.163880_g45147_i0forward_frame_1 - 0.048 13.8 0.1 0.086 12.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4787) Catalase-rel PF06628.12 NODE_53070_length_334_cov_50.177258_g45145_i0forward_frame_1 - 0.031 14.5 0.2 0.35 11.1 0.2 2.1 2 0 0 2 2 2 0 Catalase-related immune-responsive CortBP2 PF09727.9 NODE_53070_length_334_cov_50.177258_g45145_i0forward_frame_1 - 0.054 13.4 2.1 0.067 13.1 2.1 1.1 1 0 0 1 1 1 0 Cortactin-binding protein-2 OGG_N PF07934.12 NODE_53069_length_334_cov_51.474916_g45144_i0reverse_frame_1 - 0.06 13.4 0.1 0.072 13.2 0.1 1.1 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain DUF2545 PF10810.8 NODE_53066_length_334_cov_59.257525_g45141_i0forward_frame_1 - 0.36 11.0 4.0 0.64 10.2 4.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2545) Prokineticin PF06607.11 NODE_53048_length_334_cov_118.190635_g45123_i0reverse_frame_1 - 0.087 13.2 1.9 0.1 12.9 1.9 1.4 1 1 0 1 1 1 0 Prokineticin Cytokin-bind PF09265.10 NODE_53047_length_334_cov_124.695652_g45122_i0reverse_frame_1 - 0.14 11.6 0.1 0.16 11.3 0.1 1.1 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding Pkinase PF00069.25 NODE_53044_length_334_cov_146.317726_g45119_i0reverse_frame_1 - 0.0018 17.7 0.0 0.0023 17.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Ran_BP1 PF00638.18 NODE_53034_length_334_cov_746.889632_g45109_i0forward_frame_1 - 8.4e-12 45.4 0.0 9.5e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 RanBP1 domain MCC-bdg_PDZ PF10506.9 NODE_53032_length_334_cov_9621.441472_g45107_i0forward_frame_1 - 0.16 12.0 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Presenilin PF01080.17 NODE_53019_length_335_cov_1.676667_g45094_i0reverse_frame_1 - 0.0031 16.3 0.8 0.0034 16.2 0.8 1.0 1 0 0 1 1 1 1 Presenilin Prenyltransf PF01255.19 NODE_53017_length_335_cov_1.806667_g45092_i0reverse_frame_1 - 0.15 11.6 0.1 0.21 11.1 0.1 1.3 1 0 0 1 1 1 0 Putative undecaprenyl diphosphate synthase Phtf-FEM1B_bdg PF12129.8 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_1 - 0.069 13.0 0.1 0.08 12.8 0.1 1.1 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor Herpes_US9 PF06072.11 NODE_53012_length_335_cov_1.900000_g45087_i0forward_frame_1 - 3.8 7.5 11.9 5.8 6.9 0.2 3.0 2 1 1 3 3 3 0 Alphaherpesvirus tegument protein US9 ALG11_N PF15924.5 NODE_53008_length_335_cov_2.300000_g45083_i0reverse_frame_1 - 0.01 15.9 0.5 0.012 15.7 0.5 1.2 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus DUF4538 PF15061.6 NODE_53008_length_335_cov_2.300000_g45083_i0forward_frame_1 - 0.019 14.7 0.6 0.033 13.9 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) SpoIISB_antitox PF14185.6 NODE_53007_length_335_cov_2.303333_g45082_i0reverse_frame_1 - 0.12 12.3 0.2 0.23 11.4 0.2 1.4 1 0 0 1 1 1 0 Antitoxin SpoIISB, type II toxin-antitoxin system AAA_5 PF07728.14 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 2.6e-10 40.4 0.0 3.9e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.00036 21.0 0.1 0.00054 20.4 0.1 1.2 1 0 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.024 14.0 0.1 0.037 13.4 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.11 12.3 0.6 0.28 10.9 0.6 1.6 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.11 12.8 0.1 5 7.4 0.0 2.1 1 1 1 2 2 2 0 AAA domain PhoH PF02562.16 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.13 11.7 0.1 3.2 7.1 0.0 2.0 1 1 1 2 2 2 0 PhoH-like protein ABC_tran PF00005.27 NODE_53003_length_335_cov_2.526667_g45078_i0forward_frame_1 - 0.14 12.6 0.2 0.2 12.2 0.2 1.2 1 0 0 1 1 1 0 ABC transporter Paf1 PF03985.13 NODE_53000_length_335_cov_2.900000_g45075_i0forward_frame_1 - 0.0094 15.0 0.1 0.01 14.8 0.1 1.0 1 0 0 1 1 1 1 Paf1 DUF1195 PF06708.11 NODE_52999_length_335_cov_2.913333_g45074_i0reverse_frame_1 - 0.03 14.1 0.0 0.043 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1195) ISK_Channel PF02060.15 NODE_52999_length_335_cov_2.913333_g45074_i0reverse_frame_1 - 0.15 11.8 0.2 0.16 11.7 0.2 1.2 1 0 0 1 1 1 0 Slow voltage-gated potassium channel EGF_alliinase PF04863.13 NODE_52998_length_335_cov_2.966667_g45073_i0forward_frame_1 - 0.28 11.6 12.8 2.9 8.3 3.3 2.6 2 1 0 2 2 2 0 Alliinase EGF-like domain SLT_L PF14718.6 NODE_52991_length_335_cov_3.806667_g45066_i0forward_frame_1 - 0.029 14.5 0.2 0.044 13.9 0.2 1.2 1 0 0 1 1 1 0 Soluble lytic murein transglycosylase L domain Ras PF00071.22 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_1 - 9.8e-07 28.5 0.0 1.2e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Ras family DUF1493 PF07377.12 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_1 - 0.01 16.3 0.1 0.012 16.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) RsgA_GTPase PF03193.16 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_1 - 0.028 14.3 0.0 0.034 14.0 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase Iron_permease PF04120.12 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_1 - 0.074 12.8 0.2 0.084 12.6 0.2 1.1 1 0 0 1 1 1 0 Low affinity iron permease DUF604 PF04646.12 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_1 - 0.33 10.3 3.1 0.36 10.2 3.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF604 Connexin PF00029.19 NODE_52978_length_335_cov_49.076667_g45053_i0forward_frame_1 - 0.023 14.5 0.5 0.029 14.1 0.5 1.2 1 0 0 1 1 1 0 Connexin Comm PF15957.5 NODE_52977_length_335_cov_50.660000_g45052_i0reverse_frame_1 - 0.052 13.9 0.6 0.063 13.6 0.6 1.1 1 0 0 1 1 1 0 Commissureless Carbpep_Y_N PF05388.11 NODE_52977_length_335_cov_50.660000_g45052_i0reverse_frame_1 - 1.2 9.7 11.0 2.5 8.6 11.0 1.6 1 1 0 1 1 1 0 Carboxypeptidase Y pro-peptide zf_CCCH_4 PF18345.1 NODE_52971_length_335_cov_63.546667_g45046_i0reverse_frame_1 - 1e-07 31.7 4.1 1.9e-07 30.9 4.1 1.4 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_52971_length_335_cov_63.546667_g45046_i0reverse_frame_1 - 4.7e-07 30.5 1.1 6.5e-07 30.0 1.1 1.3 1 1 0 1 1 1 1 Torus domain zf-CCCH PF00642.24 NODE_52971_length_335_cov_63.546667_g45046_i0reverse_frame_1 - 6e-06 26.0 0.8 6e-06 26.0 0.8 1.5 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_52971_length_335_cov_63.546667_g45046_i0reverse_frame_1 - 6.9e-06 25.7 1.3 1.2e-05 25.0 1.3 1.4 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_3 PF15663.5 NODE_52971_length_335_cov_63.546667_g45046_i0reverse_frame_1 - 0.0051 17.0 1.2 0.0068 16.6 0.6 1.5 1 1 0 1 1 1 1 Zinc-finger containing family zf-CCCH_2 PF14608.6 NODE_52971_length_335_cov_63.546667_g45046_i0reverse_frame_1 - 0.076 13.5 4.1 0.13 12.7 4.1 1.4 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger DUF4135 PF13575.6 NODE_52970_length_335_cov_66.046667_g45045_i0reverse_frame_1 - 0.11 11.8 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) HWE_HK PF07536.14 NODE_52967_length_335_cov_72.453333_g45042_i0forward_frame_1 - 0.29 11.9 3.9 1.3 9.8 2.5 2.2 1 1 1 2 2 2 0 HWE histidine kinase Retinal PF15449.6 NODE_52963_length_335_cov_79.523333_g45038_i0reverse_frame_1 - 0.16 9.7 0.1 0.17 9.7 0.1 1.0 1 0 0 1 1 1 0 Retinal protein YrpD PF15493.6 NODE_52952_length_335_cov_115.846667_g45027_i0reverse_frame_1 - 0.046 13.6 0.1 0.051 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function, YrpD DUF4604 PF15377.6 NODE_52949_length_335_cov_124.033333_g45024_i0forward_frame_1 - 0.25 11.7 9.1 0.34 11.3 9.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) US10 PF17617.2 NODE_52947_length_335_cov_137.023333_g45022_i0forward_frame_1 - 0.012 15.7 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 Viral unique short region 10 Pkinase PF00069.25 NODE_52945_length_335_cov_145.723333_g45020_i0forward_frame_1 - 0.0016 17.9 0.0 0.0023 17.3 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain DRY_EERY PF09750.9 NODE_52940_length_335_cov_181.936667_g45015_i0reverse_frame_1 - 0.0051 17.1 0.4 0.0067 16.7 0.4 1.2 1 0 0 1 1 1 1 Alternative splicing regulator Peptidase_C58 PF03543.14 NODE_52936_length_335_cov_275.203333_g45011_i0forward_frame_1 - 0.19 11.4 0.6 0.57 9.9 0.4 1.6 1 1 1 2 2 2 0 Yersinia/Haemophilus virulence surface antigen Lamprin PF06403.11 NODE_52933_length_335_cov_475.313333_g45008_i0forward_frame_1 - 0.97 9.4 5.3 1.3 9.0 5.3 1.2 1 0 0 1 1 1 0 Lamprin DUF4845 PF16137.5 NODE_52930_length_335_cov_712.300000_g45005_i0reverse_frame_1 - 0.022 15.6 0.1 0.04 14.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4845) DUF1476 PF07345.11 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_1 - 0.24 11.8 3.4 23 5.4 0.1 3.2 2 1 1 3 3 3 0 ATPase inhibitor subunit zeta LBR_tudor PF09465.10 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_1 - 1.2 9.0 11.2 33 4.4 0.1 4.1 4 0 0 4 4 4 0 Lamin-B receptor of TUDOR domain Prok-RING_2 PF14445.6 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_1 - 2.1 8.6 8.5 27 5.0 0.1 3.5 3 1 1 4 4 4 0 Prokaryotic RING finger family 2 FNIP PF05725.12 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_1 - 2e-30 104.7 13.1 9.4e-13 48.1 2.1 3.1 3 0 0 3 3 3 3 FNIP Repeat LRR_5 PF13306.6 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_1 - 0.00034 20.6 0.2 0.00061 19.7 0.2 1.4 1 1 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) Glyco_hydro_65C PF03633.15 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_1 - 0.0008 19.3 0.5 29 4.7 0.0 4.5 5 0 0 5 5 5 2 Glycosyl hydrolase family 65, C-terminal domain LRR_11 PF18831.1 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_1 - 0.27 10.9 25.2 2.3 7.8 0.5 5.3 5 0 0 5 5 5 0 Leucine-rich repeat Sua5_yciO_yrdC PF01300.18 NODE_52921_length_336_cov_1.265781_g44996_i0forward_frame_1 - 9.2e-10 38.3 0.0 1.5e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination Equine_IAV_S2 PF06502.11 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_1 - 0.085 12.9 0.4 0.16 12.1 0.4 1.5 1 0 0 1 1 1 0 Equine infectious anaemia virus S2 protein AlaDh_PNT_N PF05222.15 NODE_52914_length_336_cov_1.754153_g44989_i0reverse_frame_1 - 0.033 14.5 2.2 0.046 14.0 2.2 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, N-terminal domain Cleaved_Adhesin PF07675.11 NODE_52914_length_336_cov_1.754153_g44989_i0forward_frame_1 - 0.061 13.3 0.3 0.08 12.9 0.3 1.1 1 0 0 1 1 1 0 Cleaved Adhesin Domain SRP54 PF00448.22 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 1.2e-11 44.6 0.3 1.2e-11 44.6 0.3 1.7 2 1 0 2 2 2 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 9.5e-07 29.0 0.3 1.5e-06 28.3 0.3 1.4 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain MeaB PF03308.16 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 2.8e-06 26.5 0.1 6.7e-06 25.3 0.0 1.6 1 1 1 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.00075 19.6 0.1 0.0014 18.6 0.1 1.5 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0022 18.4 0.0 0.0032 17.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0026 17.9 0.6 0.012 15.8 0.1 1.9 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0031 17.5 0.4 0.0038 17.2 0.4 1.3 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit MobB PF03205.14 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0042 17.0 0.4 0.018 14.9 0.1 1.9 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0058 16.4 0.4 0.024 14.4 0.1 1.8 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0065 16.2 0.5 0.014 15.2 0.3 1.7 1 1 1 2 2 2 1 IstB-like ATP binding protein ATPase PF06745.13 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.0085 15.5 0.5 0.017 14.5 0.3 1.7 1 1 1 2 2 2 1 KaiC AAA_31 PF13614.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.019 14.9 0.4 0.038 13.9 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.023 14.3 0.1 0.035 13.7 0.1 1.3 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.031 14.8 0.0 0.1 13.1 0.0 1.8 2 0 0 2 2 2 0 ABC transporter Arf PF00025.21 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.04 13.4 0.3 0.1 12.1 0.1 1.7 1 1 1 2 2 2 0 ADP-ribosylation factor family APS_kinase PF01583.20 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.046 13.6 0.2 0.099 12.5 0.1 1.5 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_14 PF13173.6 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.061 13.3 1.2 0.39 10.7 0.2 2.1 1 1 1 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.087 12.5 0.1 0.27 10.9 0.0 1.7 2 0 0 2 2 2 0 Thymidylate kinase SopE_GEF PF07487.13 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.098 12.8 0.3 0.15 12.1 0.2 1.3 1 1 0 1 1 1 0 SopE GEF domain AAA_5 PF07728.14 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.1 12.6 0.3 1 9.4 0.0 2.2 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) SRPRB PF09439.10 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.11 11.9 1.3 3 7.2 0.1 2.1 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit DUF2375 PF09558.10 NODE_52912_length_336_cov_1.813953_g44987_i0reverse_frame_1 - 0.14 12.2 0.1 0.27 11.3 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2375) NDUF_B5 PF09781.9 NODE_52910_length_336_cov_1.906977_g44985_i0forward_frame_1 - 0.23 11.0 0.1 0.23 11.0 0.1 1.3 2 0 0 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit DUF844 PF05815.11 NODE_52909_length_336_cov_2.046512_g44984_i0forward_frame_1 - 0.024 13.9 0.0 0.03 13.5 0.0 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF844) SpoU_sub_bind PF08032.12 NODE_52909_length_336_cov_2.046512_g44984_i0forward_frame_1 - 0.1 12.9 0.0 0.44 10.9 0.0 1.8 1 1 1 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding VEGFR-2_TMD PF17988.1 NODE_52907_length_336_cov_2.066445_g44982_i0reverse_frame_1 - 0.11 12.0 1.3 0.16 11.4 1.3 1.3 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain SmaI PF17411.2 NODE_52906_length_336_cov_2.285714_g44981_i0forward_frame_1 - 0.08 12.1 0.1 0.097 11.8 0.1 1.1 1 0 0 1 1 1 0 Type II site-specific deoxyribonuclease KELK PF15796.5 NODE_52902_length_336_cov_2.435216_g44977_i0reverse_frame_1 - 0.23 11.9 3.5 0.43 11.1 3.2 1.6 1 1 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Herpes_LMP1 PF05297.11 NODE_52896_length_336_cov_2.564784_g44971_i0reverse_frame_1 - 0.71 9.0 3.0 0.76 8.9 3.0 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Peripla_BP_6 PF13458.6 NODE_52889_length_336_cov_3.408638_g44964_i0reverse_frame_1 - 0.062 13.0 0.0 0.075 12.7 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding protein BESS PF02944.20 NODE_52888_length_336_cov_5.807309_g44963_i0reverse_frame_1 - 0.53 10.2 3.1 20 5.1 0.5 2.9 2 1 0 2 2 2 0 BESS motif DAP10 PF07213.11 NODE_52886_length_336_cov_8.843854_g44961_i0reverse_frame_1 - 0.08 12.9 0.9 0.23 11.4 0.1 2.0 1 1 1 2 2 2 0 DAP10 membrane protein DUF4105 PF13387.6 NODE_52885_length_336_cov_25.431894_g44960_i0reverse_frame_1 - 0.098 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4105) ROQ_II PF18386.1 NODE_52872_length_336_cov_68.764120_g44947_i0reverse_frame_1 - 0.02 14.7 0.0 0.028 14.3 0.0 1.2 1 0 0 1 1 1 0 Roquin II domain zf_CCCH_5 PF18384.1 NODE_52872_length_336_cov_68.764120_g44947_i0forward_frame_1 - 0.045 13.9 0.1 0.084 13.0 0.1 1.5 1 0 0 1 1 1 0 Unkempt Zinc finger domain 1 (Znf1) Crystallin PF00525.18 NODE_52871_length_336_cov_68.777409_g44946_i0reverse_frame_1 - 0.087 13.0 0.4 0.14 12.4 0.4 1.3 1 0 0 1 1 1 0 Alpha crystallin A chain, N terminal SPAN PF02510.14 NODE_52871_length_336_cov_68.777409_g44946_i0forward_frame_1 - 0.18 11.0 0.1 0.2 10.8 0.1 1.1 1 0 0 1 1 1 0 Surface presentation of antigens protein SAM_DrpA PF18255.1 NODE_52868_length_336_cov_72.760797_g44943_i0forward_frame_1 - 0.029 14.6 0.0 0.85 9.9 0.0 2.2 2 0 0 2 2 2 0 DNA processing protein A sterile alpha motif domain DUF4106 PF13388.6 NODE_52867_length_336_cov_73.172757_g44942_i0reverse_frame_1 - 0.48 9.6 4.0 0.56 9.4 4.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) Inhibitor_I68 PF10468.9 NODE_52867_length_336_cov_73.172757_g44942_i0reverse_frame_1 - 0.73 10.3 6.2 5.3 7.5 6.2 2.0 1 1 0 1 1 1 0 Carboxypeptidase inhibitor I68 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks235.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks235.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks235.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks235.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Fer2_3 PF13085.6 NODE_52863_length_336_cov_80.006645_g44938_i0reverse_frame_1 - 0.13 12.3 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain SfsA PF03749.13 NODE_52860_length_336_cov_89.840532_g44935_i0forward_frame_1 - 0.0051 16.7 0.0 0.0073 16.2 0.0 1.2 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain Borrelia_rep PF03183.13 NODE_52854_length_336_cov_103.348837_g44929_i0reverse_frame_1 - 0.59 10.2 4.6 1.4 9.1 0.2 2.3 2 0 0 2 2 2 0 Borrelia repeat protein PTPlike_phytase PF14566.6 NODE_52852_length_336_cov_116.401993_g44927_i0forward_frame_1 - 0.037 14.1 0.2 0.048 13.8 0.2 1.1 1 0 0 1 1 1 0 Inositol hexakisphosphate Mgm101p PF06420.12 NODE_52852_length_336_cov_116.401993_g44927_i0forward_frame_1 - 0.051 13.1 0.0 0.062 12.8 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial genome maintenance MGM101 DUF1272 PF06906.11 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_1 - 0.022 14.9 12.7 0.36 10.9 6.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1272) Phtf-FEM1B_bdg PF12129.8 NODE_52837_length_336_cov_593.730897_g44912_i0reverse_frame_1 - 0.0091 15.8 1.0 0.011 15.6 1.0 1.1 1 0 0 1 1 1 1 Male germ-cell putative homeodomain transcription factor TraS PF10624.9 NODE_52832_length_337_cov_1.417219_g44908_i0reverse_frame_2 - 0.14 12.1 2.8 0.18 11.7 2.8 1.3 1 1 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS Cytochrom_NNT PF03264.14 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 3.7e-39 134.2 0.3 4e-39 134.1 0.3 1.0 1 0 0 1 1 1 1 NapC/NirT cytochrome c family, N-terminal region Paired_CXXCH_1 PF09699.10 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.00041 20.0 2.6 0.13 12.0 0.5 2.3 2 0 0 2 2 2 2 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_P460 PF16694.5 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.0017 18.7 2.7 0.067 13.5 0.1 2.3 1 1 1 2 2 2 1 Cytochrome P460 Cytochrom_CIII PF02085.16 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.0042 17.4 4.9 0.37 11.1 5.3 2.3 1 1 1 2 2 2 2 Class III cytochrome C family Cytochrome_C7 PF14522.6 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.017 15.1 5.1 0.054 13.5 4.8 1.7 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.032 14.7 3.6 0.042 14.3 2.5 1.6 1 1 0 1 1 1 0 Cytochrome c3 Cytochrome_CBB3 PF13442.6 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.055 13.8 0.3 3.2 8.2 0.0 2.2 2 0 0 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III Defensin_5 PF18251.1 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.061 13.4 1.7 6.4 7.0 0.1 2.2 2 0 0 2 2 2 0 Fungal defensin Copsin Cytochrome_C554 PF13435.6 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.067 14.1 2.1 1.4 9.8 2.8 2.2 1 1 1 2 2 2 0 Cytochrome c554 and c-prime CCP_MauG PF03150.14 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.11 13.1 3.3 4.9 7.8 0.2 2.1 1 1 1 2 2 2 0 Di-haem cytochrome c peroxidase Cytochrom_C PF00034.21 NODE_52831_length_337_cov_1.456954_g44907_i0forward_frame_2 - 0.81 10.9 3.9 31 5.8 3.9 2.3 1 1 0 1 1 1 0 Cytochrome c Thioredoxin_12 PF18400.1 NODE_52829_length_337_cov_1.549669_g44905_i0reverse_frame_2 - 0.019 14.8 0.6 0.026 14.4 0.6 1.3 1 1 0 1 1 1 0 Thioredoxin-like domain DUF1231 PF06802.11 NODE_52825_length_337_cov_1.850993_g44901_i0forward_frame_3 - 0.019 14.1 0.4 0.021 14.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1231) DUF5439 PF17507.2 NODE_52825_length_337_cov_1.850993_g44901_i0forward_frame_3 - 0.64 10.3 5.6 1.5 9.1 0.2 2.3 2 1 0 2 2 2 0 Family of unknown function (DUF5439) ArgoMid PF16487.5 NODE_52824_length_337_cov_1.910596_g44900_i0forward_frame_3 - 0.0096 16.2 0.1 0.015 15.6 0.1 1.4 1 0 0 1 1 1 1 Mid domain of argonaute Caveolin PF01146.17 NODE_52816_length_337_cov_2.198675_g44892_i0forward_frame_2 - 0.099 12.6 3.3 0.12 12.3 3.3 1.2 1 0 0 1 1 1 0 Caveolin Spore-coat_CotD PF11122.8 NODE_52815_length_337_cov_2.215232_g44891_i0forward_frame_3 - 0.094 13.5 1.0 0.15 12.8 1.0 1.4 1 1 0 1 1 1 0 Inner spore coat protein D RCC1_2 PF13540.6 NODE_52814_length_337_cov_2.231788_g44890_i0reverse_frame_3 - 1.5e-06 27.8 1.4 0.061 13.1 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat PAN_3 PF08277.12 NODE_52813_length_337_cov_2.245033_g44889_i0forward_frame_2 - 0.044 13.6 0.8 0.044 13.6 0.8 1.5 2 0 0 2 2 2 0 PAN-like domain Baculo_LEF-3 PF05847.11 NODE_52812_length_337_cov_2.271523_g44888_i0reverse_frame_2 - 0.014 14.6 0.0 0.016 14.4 0.0 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus late expression factor 3 (LEF-3) Pkinase PF00069.25 NODE_52812_length_337_cov_2.271523_g44888_i0forward_frame_2 - 1.4e-18 67.3 1.9 1.6e-18 67.0 1.9 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_52812_length_337_cov_2.271523_g44888_i0forward_frame_2 - 2.1e-06 27.2 0.6 2.5e-06 27.0 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Spheroidin PF05541.12 NODE_52808_length_337_cov_2.678808_g44884_i0reverse_frame_2 - 0.75 7.6 2.8 0.82 7.4 2.8 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein Pox_C7_F8A PF03287.14 NODE_52808_length_337_cov_2.678808_g44884_i0forward_frame_3 - 0.16 11.9 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 Poxvirus C7/F8A protein DUF1943 PF09172.11 NODE_52806_length_337_cov_2.774834_g44882_i0reverse_frame_3 - 0.036 13.3 1.5 0.039 13.2 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Thioredoxin_11 PF18078.1 NODE_52806_length_337_cov_2.774834_g44882_i0reverse_frame_3 - 0.23 11.6 3.1 0.22 11.7 2.0 1.5 1 1 0 1 1 1 0 Thioredoxin-like SNTX domain MacB_PCD PF12704.7 NODE_52804_length_337_cov_2.903974_g44880_i0reverse_frame_2 - 0.00039 20.8 0.3 0.00052 20.4 0.3 1.1 1 0 0 1 1 1 1 MacB-like periplasmic core domain PD-C2-AF1 PF09310.10 NODE_52804_length_337_cov_2.903974_g44880_i0forward_frame_2 - 0.052 12.9 0.1 0.075 12.4 0.1 1.2 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 RINGv PF12906.7 NODE_52802_length_337_cov_3.062914_g44878_i0reverse_frame_3 - 0.15 12.2 0.3 0.15 12.2 0.3 2.2 3 0 0 3 3 3 0 RING-variant domain FAM183 PF14886.6 NODE_52802_length_337_cov_3.062914_g44878_i0reverse_frame_2 - 0.13 13.0 3.0 0.19 12.5 3.0 1.3 1 0 0 1 1 1 0 FAM183A and FAM183B related zf-Nse PF11789.8 NODE_52800_length_337_cov_3.347682_g44876_i0forward_frame_3 - 10 6.1 7.4 2 8.3 2.3 2.4 2 1 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit Thioredoxin_8 PF13905.6 NODE_52799_length_337_cov_3.490066_g44875_i0reverse_frame_3 - 0.051 13.9 0.0 0.073 13.4 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like Lge1 PF11488.8 NODE_52799_length_337_cov_3.490066_g44875_i0reverse_frame_3 - 0.092 12.9 0.1 0.35 11.1 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulatory protein LGE1 Lamprin PF06403.11 NODE_52797_length_337_cov_4.506623_g44873_i0forward_frame_2 - 2.5 8.1 11.9 5.4 7.0 2.3 2.1 1 1 1 2 2 2 0 Lamprin DUF4372 PF14294.6 NODE_52795_length_337_cov_4.778146_g44871_i0reverse_frame_3 - 0.32 11.2 1.9 2.9 8.1 1.9 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4372) ORF6C PF10552.9 NODE_52795_length_337_cov_4.778146_g44871_i0reverse_frame_2 - 0.058 13.5 0.1 0.079 13.0 0.1 1.3 1 0 0 1 1 1 0 ORF6C domain YwcE PF17368.2 NODE_52794_length_337_cov_5.701987_g44870_i0forward_frame_2 - 0.041 14.5 3.7 0.058 14.1 3.7 1.2 1 0 0 1 1 1 0 Spore morphogenesis and germination YwcE zf-C3HC4_2 PF13923.6 NODE_52791_length_337_cov_35.337748_g44867_i0forward_frame_3 - 2 8.3 18.6 4.2 7.3 18.6 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_15 PF17032.5 NODE_52789_length_337_cov_50.784768_g44865_i0reverse_frame_2 - 0.24 12.2 7.1 0.37 11.6 7.1 1.3 1 0 0 1 1 1 0 zinc-ribbon family NOB1_Zn_bind PF08772.11 NODE_52789_length_337_cov_50.784768_g44865_i0reverse_frame_2 - 0.25 11.5 4.8 0.36 11.0 4.8 1.3 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Nop14 PF04147.12 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 0.44 8.7 17.1 0.41 8.8 17.1 1.0 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 0.5 9.8 17.4 0.47 9.8 17.4 1.1 1 0 0 1 1 1 0 SDA1 Sigma70_ner PF04546.13 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 1.4 8.7 14.7 1.7 8.5 14.7 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region CobT PF06213.12 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 1.7 8.0 17.5 2.1 7.6 17.5 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT TFB6 PF17110.5 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 1.8 8.3 5.9 2 8.2 5.9 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH CDC45 PF02724.14 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 2.8 6.1 15.8 3.3 5.9 15.8 1.1 1 0 0 1 1 1 0 CDC45-like protein Pox_Ag35 PF03286.14 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 3.9 7.2 9.5 4.4 7.0 9.5 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein PPP4R2 PF09184.11 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 4.7 6.7 13.7 4.7 6.7 13.7 1.2 1 0 0 1 1 1 0 PPP4R2 Paf1 PF03985.13 NODE_52786_length_337_cov_59.394040_g44862_i0reverse_frame_3 - 9.9 5.0 15.7 12 4.7 15.7 1.0 1 0 0 1 1 1 0 Paf1 SR-25 PF10500.9 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_2 - 0.0034 17.0 6.4 0.0034 17.0 6.4 2.0 1 1 1 2 2 2 1 Nuclear RNA-splicing-associated protein EphA2_TM PF14575.6 NODE_52784_length_337_cov_66.205298_g44860_i0reverse_frame_2 - 8.5 7.3 7.7 30 5.6 7.7 1.9 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF4763 PF15960.5 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.005 16.2 10.6 0.005 16.2 10.6 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4763) ADIP PF11559.8 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.11 12.6 18.0 0.11 12.6 17.2 1.4 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DASH_Hsk3 PF08227.11 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.25 11.8 6.6 3.2 8.2 0.7 2.6 1 1 1 2 2 2 0 DASH complex subunit Hsk3 like DUF484 PF04340.12 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.26 11.0 6.0 0.37 10.5 6.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF484 UPF0242 PF06785.11 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.32 11.1 22.9 0.39 10.8 22.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Hemagglutinin PF00509.18 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.75 8.1 6.4 0.89 7.9 6.4 1.1 1 0 0 1 1 1 0 Haemagglutinin Fzo_mitofusin PF04799.13 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.82 9.2 8.9 1.2 8.7 8.8 1.4 1 1 0 1 1 1 0 fzo-like conserved region 5_nucleotid PF05761.14 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 0.94 8.3 9.2 1.1 8.1 9.2 1.1 1 0 0 1 1 1 0 5' nucleotidase family DUF3945 PF13101.6 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 1.2 8.9 7.0 3 7.6 7.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3945) Exonuc_VII_L PF02601.15 NODE_52781_length_337_cov_70.082781_g44857_i0forward_frame_3 - 5.2 6.6 11.3 5.9 6.4 11.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit VMA21 PF09446.10 NODE_52778_length_337_cov_72.586093_g44854_i0reverse_frame_2 - 1.6 8.9 6.3 0.099 12.8 1.1 1.7 2 0 0 2 2 2 0 VMA21-like domain MBD PF01429.19 NODE_52776_length_337_cov_74.804636_g44852_i0reverse_frame_3 - 0.031 14.0 0.0 0.045 13.5 0.0 1.2 1 0 0 1 1 1 0 Methyl-CpG binding domain BMF PF15185.6 NODE_52775_length_337_cov_78.549669_g44851_i0reverse_frame_2 - 0.037 13.8 1.0 0.043 13.6 1.0 1.1 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis HypA PF01155.19 NODE_52775_length_337_cov_78.549669_g44851_i0forward_frame_2 - 0.01 15.9 0.5 0.013 15.5 0.5 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Phasin PF05597.11 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.0052 16.8 3.5 0.0065 16.5 3.5 1.1 1 0 0 1 1 1 1 Poly(hydroxyalcanoate) granule associated protein (phasin) WPP PF13943.6 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.0061 16.9 0.1 0.0079 16.6 0.1 1.2 1 0 0 1 1 1 1 WPP domain OmpH PF03938.14 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.011 16.0 2.8 0.014 15.8 2.8 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) MAT1 PF06391.13 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.054 13.3 7.9 0.067 13.0 7.9 1.0 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 Gp_dh_N PF00044.24 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.14 12.5 0.6 0.19 12.1 0.6 1.2 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TMPIT PF07851.13 NODE_52773_length_337_cov_79.397351_g44849_i0reverse_frame_3 - 0.15 11.3 1.9 0.17 11.1 1.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein Ima1_N PF09779.9 NODE_52770_length_337_cov_84.327815_g44846_i0reverse_frame_3 - 0.0043 17.9 0.9 0.0054 17.6 0.9 1.1 1 0 0 1 1 1 1 Ima1 N-terminal domain zinc_ribbon_6 PF14599.6 NODE_52770_length_337_cov_84.327815_g44846_i0reverse_frame_3 - 0.019 15.0 1.1 0.044 13.8 0.4 1.9 1 1 1 2 2 2 0 Zinc-ribbon Histone_H2A_C PF16211.5 NODE_52770_length_337_cov_84.327815_g44846_i0reverse_frame_3 - 0.26 11.0 1.9 0.4 10.4 1.9 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A DUF3737 PF12541.8 NODE_52759_length_337_cov_136.688742_g44835_i0forward_frame_2 - 0.0061 15.8 0.6 0.011 15.0 0.6 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3737) PH_TFIIH PF08567.11 NODE_52759_length_337_cov_136.688742_g44835_i0forward_frame_2 - 0.025 14.9 0.1 0.037 14.3 0.1 1.4 1 1 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain AdoMetDC_leader PF08132.11 NODE_52758_length_337_cov_148.854305_g44834_i0forward_frame_3 - 0.062 13.2 1.0 0.11 12.4 1.0 1.4 1 0 0 1 1 1 0 S-adenosyl-l-methionine decarboxylase leader peptide Parathyroid PF01279.17 NODE_52758_length_337_cov_148.854305_g44834_i0forward_frame_2 - 0.19 12.4 0.1 0.3 11.7 0.1 1.3 1 0 0 1 1 1 0 Parathyroid hormone family zf-CCCH_2 PF14608.6 NODE_52756_length_337_cov_189.029801_g44832_i0forward_frame_3 - 0.7 10.5 4.6 1.8 9.1 4.6 1.7 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Ku_PK_bind PF08785.11 NODE_52756_length_337_cov_189.029801_g44832_i0forward_frame_2 - 0.057 13.6 0.0 0.08 13.1 0.0 1.3 1 0 0 1 1 1 0 Ku C terminal domain like SH3_15 PF18346.1 NODE_52753_length_337_cov_221.582781_g44829_i0reverse_frame_3 - 0.07 13.5 0.2 0.1 13.0 0.2 1.2 1 0 0 1 1 1 0 Mind bomb SH3 repeat domain HMG_box PF00505.19 NODE_52750_length_337_cov_244.533113_g44826_i0reverse_frame_2 - 8e-08 32.6 0.2 1.2e-07 32.0 0.2 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_52750_length_337_cov_244.533113_g44826_i0reverse_frame_2 - 0.00012 22.6 0.5 0.0002 21.9 0.5 1.4 1 0 0 1 1 1 1 HMG-box domain IL4 PF00727.18 NODE_52749_length_337_cov_264.850993_g44825_i0forward_frame_3 - 0.0054 16.9 0.1 0.0054 16.9 0.1 1.2 1 0 0 1 1 1 1 Interleukin 4 Pollen_Ole_e_I PF01190.17 NODE_52747_length_337_cov_478.642384_g44823_i0reverse_frame_3 - 0.052 13.9 0.4 0.072 13.5 0.4 1.1 1 0 0 1 1 1 0 Pollen proteins Ole e I like DAN PF03045.15 NODE_52747_length_337_cov_478.642384_g44823_i0forward_frame_3 - 0.0094 16.0 0.4 0.016 15.3 0.4 1.3 1 0 0 1 1 1 1 DAN domain Tryp_inh PF17983.1 NODE_52742_length_338_cov_1.231023_g44818_i0forward_frame_2 - 0.27 11.3 1.9 0.48 10.5 1.9 1.4 1 0 0 1 1 1 0 Trypsin inhibitors 1,2 and 3 SAPS PF04499.15 NODE_52741_length_338_cov_1.316832_g44817_i0reverse_frame_3 - 2.1 7.0 4.4 2.3 6.9 4.4 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein HMMR_N PF15905.5 NODE_52739_length_338_cov_1.442244_g44815_i0reverse_frame_2 - 0.027 13.9 0.4 0.031 13.7 0.4 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal SLC3A2_N PF16028.5 NODE_52739_length_338_cov_1.442244_g44815_i0forward_frame_2 - 0.15 11.7 2.3 5.2 6.7 0.1 2.1 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus DUF4492 PF14899.6 NODE_52734_length_338_cov_1.669967_g44810_i0reverse_frame_3 - 0.029 14.3 0.9 0.029 14.3 0.9 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4492) Gar1 PF04410.14 NODE_52734_length_338_cov_1.669967_g44810_i0reverse_frame_2 - 0.22 11.3 0.7 3.3 7.4 0.1 2.0 1 1 1 2 2 2 0 Gar1/Naf1 RNA binding region Tafi-CsgC PF10610.9 NODE_52734_length_338_cov_1.669967_g44810_i0forward_frame_2 - 0.029 14.6 0.0 0.048 13.8 0.0 1.3 1 1 0 1 1 1 0 Thin aggregative fimbriae synthesis protein Pro-rich_19 PF15455.6 NODE_52732_length_338_cov_1.706271_g44808_i0forward_frame_3 - 0.069 12.3 4.6 0.077 12.1 4.6 1.1 1 0 0 1 1 1 0 Proline-rich 19 YdjM PF04307.14 NODE_52732_length_338_cov_1.706271_g44808_i0forward_frame_2 - 0.029 13.7 1.2 0.028 13.8 1.2 1.1 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Cation_efflux PF01545.21 NODE_52728_length_338_cov_1.990099_g44804_i0reverse_frame_2 - 8.9e-08 32.1 1.6 1.2e-07 31.6 1.6 1.2 1 0 0 1 1 1 1 Cation efflux family Mlo PF03094.15 NODE_52727_length_338_cov_2.029703_g44803_i0reverse_frame_3 - 0.15 10.4 0.0 0.18 10.2 0.0 1.0 1 0 0 1 1 1 0 Mlo family YwcE PF17368.2 NODE_52724_length_338_cov_2.191419_g44800_i0forward_frame_2 - 0.066 13.9 2.5 0.075 13.7 1.2 1.8 1 1 0 1 1 1 0 Spore morphogenesis and germination YwcE LytTR PF04397.15 NODE_52723_length_338_cov_2.198020_g44799_i0forward_frame_2 - 0.21 11.8 1.2 7.7 6.8 0.2 2.2 2 0 0 2 2 2 0 LytTr DNA-binding domain Na_H_Exchanger PF00999.21 NODE_52720_length_338_cov_2.349835_g44796_i0forward_frame_3 - 1.1e-15 57.4 4.2 1.2e-15 57.2 4.2 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DUF2681 PF10883.8 NODE_52718_length_338_cov_2.425743_g44794_i0reverse_frame_3 - 0.01 16.2 4.0 0.43 11.0 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) Holin_BhlA PF10960.8 NODE_52718_length_338_cov_2.425743_g44794_i0reverse_frame_3 - 0.69 9.9 3.6 4.2 7.4 0.7 2.2 1 1 1 2 2 2 0 BhlA holin family Cons_hypoth698 PF03601.14 NODE_52718_length_338_cov_2.425743_g44794_i0forward_frame_3 - 0.072 12.0 0.4 0.095 11.6 0.4 1.1 1 0 0 1 1 1 0 Conserved hypothetical protein 698 Claudin_3 PF06653.11 NODE_52718_length_338_cov_2.425743_g44794_i0forward_frame_3 - 0.079 12.9 2.6 0.067 13.1 1.6 1.4 1 1 0 1 1 1 0 Tight junction protein, Claudin-like Bax1-I PF01027.20 NODE_52715_length_338_cov_2.600660_g44791_i0forward_frame_2 - 1.3e-08 34.9 4.7 1.5e-08 34.7 4.7 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF2684 PF10885.8 NODE_52715_length_338_cov_2.600660_g44791_i0forward_frame_2 - 0.047 13.8 0.7 0.063 13.4 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) zf_CCCH_4 PF18345.1 NODE_52714_length_338_cov_2.729373_g44790_i0reverse_frame_3 - 0.043 13.9 0.8 0.043 13.9 0.8 2.1 2 0 0 2 2 2 0 Zinc finger domain zf-CCCH PF00642.24 NODE_52714_length_338_cov_2.729373_g44790_i0reverse_frame_3 - 0.089 12.7 0.8 0.089 12.7 0.8 2.7 4 0 0 4 4 4 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) 2OG-FeII_Oxy_4 PF13661.6 NODE_52714_length_338_cov_2.729373_g44790_i0forward_frame_2 - 0.029 15.0 0.1 0.048 14.3 0.1 1.4 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily zf-trcl PF13451.6 NODE_52714_length_338_cov_2.729373_g44790_i0forward_frame_2 - 0.22 11.4 0.6 0.22 11.4 0.6 2.5 2 0 0 2 2 2 0 Probable zinc-ribbon domain Pyridox_oxase_2 PF12766.7 NODE_52708_length_338_cov_2.953795_g44784_i0reverse_frame_2 - 0.092 13.4 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase TPR_18 PF13512.6 NODE_52708_length_338_cov_2.953795_g44784_i0forward_frame_2 - 2.7e-55 186.5 1.6 2.9e-55 186.4 1.6 1.0 1 0 0 1 1 1 1 Tetratricopeptide repeat YfiO PF13525.6 NODE_52708_length_338_cov_2.953795_g44784_i0forward_frame_2 - 1.2e-45 155.8 0.6 1.3e-45 155.7 0.6 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein TPR_16 PF13432.6 NODE_52708_length_338_cov_2.953795_g44784_i0forward_frame_2 - 0.00066 20.3 0.4 0.0057 17.3 0.4 2.1 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_52708_length_338_cov_2.953795_g44784_i0forward_frame_2 - 0.0013 19.3 2.8 4.5 8.1 0.0 3.5 3 1 0 3 3 3 2 Tetratricopeptide repeat Eclosion PF04736.12 NODE_52706_length_338_cov_3.201320_g44782_i0forward_frame_3 - 0.49 10.1 10.8 1.2 8.9 10.8 1.7 1 1 0 1 1 1 0 Eclosion hormone Cyclin_N PF00134.23 NODE_52705_length_338_cov_3.237624_g44781_i0reverse_frame_2 - 2.6e-05 24.0 0.0 3.7e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain EF-hand_2 PF09068.11 NODE_52705_length_338_cov_3.237624_g44781_i0forward_frame_2 - 0.29 11.3 2.2 0.47 10.6 2.2 1.5 1 1 0 1 1 1 0 EF hand DUF1156 PF06634.12 NODE_52701_length_338_cov_3.544554_g44777_i0forward_frame_3 - 0.064 13.4 0.2 0.1 12.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1156) Trehalase PF01204.18 NODE_52701_length_338_cov_3.544554_g44777_i0forward_frame_2 - 4.3e-24 85.2 0.0 5.3e-24 84.9 0.0 1.1 1 0 0 1 1 1 1 Trehalase HATPase_c PF02518.26 NODE_52699_length_338_cov_3.666667_g44775_i0forward_frame_3 - 1.4e-09 38.4 0.0 2.4e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 NODE_52699_length_338_cov_3.666667_g44775_i0forward_frame_3 - 0.086 12.9 0.3 0.36 10.9 0.2 1.9 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain zf-IS66 PF13005.7 NODE_52699_length_338_cov_3.666667_g44775_i0forward_frame_2 - 1.3 9.5 8.8 0.67 10.4 4.9 2.4 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 DUF2651 PF10852.8 NODE_52697_length_338_cov_3.937294_g44773_i0reverse_frame_2 - 0.18 12.4 4.7 0.11 13.1 2.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2651) DUF3772 PF12607.8 NODE_52695_length_338_cov_8.788779_g44771_i0reverse_frame_2 - 0.087 12.6 0.6 0.087 12.6 0.6 2.1 3 1 0 3 3 3 0 Protein of unknown function (DUF3772) DUF1104 PF06518.11 NODE_52695_length_338_cov_8.788779_g44771_i0reverse_frame_2 - 0.092 13.1 2.4 0.29 11.5 0.6 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF1104) GCM PF03615.15 NODE_52692_length_338_cov_31.640264_g44768_i0reverse_frame_3 - 0.08 12.8 0.8 0.13 12.2 0.8 1.4 1 1 0 1 1 1 0 GCM motif protein RFX5_N PF18326.1 NODE_52692_length_338_cov_31.640264_g44768_i0forward_frame_3 - 0.2 11.4 0.2 0.33 10.7 0.2 1.2 1 0 0 1 1 1 0 RFX5 N-terminal domain Popeye PF04831.13 NODE_52689_length_338_cov_46.976898_g44765_i0reverse_frame_2 - 1.9 8.6 7.7 2.2 8.5 7.7 1.2 1 0 0 1 1 1 0 Popeye protein conserved region Asp PF00026.23 NODE_52686_length_338_cov_52.072607_g44762_i0forward_frame_2 - 5.3e-08 32.7 0.0 6.3e-08 32.4 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF1422 PF07226.11 NODE_52683_length_338_cov_58.551155_g44759_i0reverse_frame_3 - 0.011 15.8 1.2 0.013 15.4 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) DUF2800 PF10926.8 NODE_52678_length_338_cov_70.564356_g44754_i0forward_frame_3 - 0.047 12.9 0.2 0.053 12.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2800) Herpes_glycop PF01528.16 NODE_52678_length_338_cov_70.564356_g44754_i0forward_frame_2 - 0.25 10.2 0.1 0.29 9.9 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus glycoprotein M MotB_plug PF13677.6 NODE_52676_length_338_cov_72.184818_g44752_i0reverse_frame_2 - 0.37 10.4 3.1 0.57 9.8 1.2 2.1 2 1 1 3 3 3 0 Membrane MotB of proton-channel complex MotA/MotB CCDC32 PF14989.6 NODE_52676_length_338_cov_72.184818_g44752_i0forward_frame_3 - 0.00015 21.8 0.6 0.00018 21.5 0.6 1.1 1 0 0 1 1 1 1 Coiled-coil domain containing 32 DUF3510 PF12022.8 NODE_52676_length_338_cov_72.184818_g44752_i0forward_frame_3 - 0.0087 16.4 1.3 0.01 16.2 1.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3510) AvrLm4-7 PF18661.1 NODE_52676_length_338_cov_72.184818_g44752_i0forward_frame_3 - 0.12 13.4 1.5 0.17 12.9 1.5 1.2 1 0 0 1 1 1 0 Avirulence Effector AvrLm4-7 FAA_hydro_N_2 PF18288.1 NODE_52676_length_338_cov_72.184818_g44752_i0forward_frame_3 - 0.16 12.4 0.0 0.23 11.9 0.0 1.3 1 0 0 1 1 1 0 Fumarylacetoacetase N-terminal domain 2 Stirrup PF09061.6 NODE_52673_length_338_cov_78.046205_g44749_i0reverse_frame_3 - 0.18 12.0 1.4 0.28 11.4 1.4 1.3 1 0 0 1 1 1 0 Stirrup SOBP PF15279.6 NODE_52673_length_338_cov_78.046205_g44749_i0reverse_frame_2 - 4.3 7.8 7.5 5.2 7.6 7.5 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein HAD_SAK_1 PF10307.9 NODE_52671_length_338_cov_84.488449_g44747_i0reverse_frame_2 - 0.025 14.4 1.8 0.03 14.1 1.8 1.1 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins EF1G PF00647.19 NODE_52670_length_338_cov_84.792079_g44746_i0reverse_frame_2 - 0.031 14.3 0.1 0.05 13.7 0.1 1.4 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain FtsK_4TM PF13491.6 NODE_52670_length_338_cov_84.792079_g44746_i0forward_frame_3 - 0.028 14.1 2.3 0.051 13.3 2.3 1.4 1 1 0 1 1 1 0 4TM region of DNA translocase FtsK/SpoIIIE DUF2057 PF09829.9 NODE_52665_length_338_cov_96.085809_g44741_i0reverse_frame_3 - 0.083 13.1 1.2 0.11 12.6 1.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) OTT_1508_deam PF14441.6 NODE_52664_length_338_cov_101.283828_g44740_i0forward_frame_3 - 0.027 14.5 4.0 0.053 13.5 4.0 1.5 1 0 0 1 1 1 0 OTT_1508-like deaminase HydF_tetramer PF18133.1 NODE_52662_length_338_cov_104.270627_g44738_i0forward_frame_3 - 0.85 9.4 7.0 1.1 9.0 7.0 1.1 1 0 0 1 1 1 0 Hydrogen maturase F tetramerization domain Caskin-Pro-rich PF16907.5 NODE_52661_length_338_cov_105.280528_g44737_i0reverse_frame_3 - 1.7 9.2 6.1 2.8 8.5 6.1 1.3 1 0 0 1 1 1 0 Proline rich region of Caskin proteins NRDE-2 PF08424.10 NODE_52660_length_338_cov_121.184818_g44736_i0forward_frame_2 - 0.08 12.1 0.1 0.11 11.6 0.1 1.2 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference Prenyltrans PF00432.21 NODE_52650_length_338_cov_229.623762_g44726_i0forward_frame_3 - 0.13 12.0 0.1 0.29 10.9 0.1 1.7 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat Acetyltransf_9 PF13527.7 NODE_52650_length_338_cov_229.623762_g44726_i0forward_frame_3 - 0.13 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain S1FA PF04689.13 NODE_52647_length_338_cov_278.669967_g44723_i0reverse_frame_3 - 0.0043 17.2 3.0 0.0065 16.6 3.0 1.3 1 0 0 1 1 1 1 DNA binding protein S1FA TAP35_44 PF07265.11 NODE_52643_length_338_cov_546.409241_g44720_i0forward_frame_2 - 0.5 10.4 4.4 0.75 9.8 4.4 1.3 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 VWC PF00093.18 NODE_52642_length_338_cov_578.495050_g44719_i0reverse_frame_2 - 1.9 8.8 16.2 3.2 8.1 16.2 1.5 1 1 0 1 1 1 0 von Willebrand factor type C domain YMF19 PF02326.15 NODE_52642_length_338_cov_578.495050_g44719_i0forward_frame_3 - 5 8.0 10.2 0.56 11.0 1.4 2.7 2 1 1 3 3 3 0 Plant ATP synthase F0 TAP35_44 PF07265.11 NODE_52642_length_338_cov_578.495050_g44719_i0forward_frame_2 - 0.49 10.4 4.4 0.75 9.8 4.4 1.3 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 SpoIIAA-like PF11964.8 NODE_52641_length_338_cov_821.432343_g44718_i0reverse_frame_3 - 0.1 13.6 0.1 0.13 13.3 0.1 1.2 1 0 0 1 1 1 0 SpoIIAA-like zf-C5HC2 PF02928.16 NODE_52640_length_338_cov_992.468647_g44717_i0reverse_frame_3 - 6.5e-06 26.4 18.5 9.8e-06 25.9 18.5 1.3 1 0 0 1 1 1 1 C5HC2 zinc finger TMEM52 PF14979.6 NODE_52640_length_338_cov_992.468647_g44717_i0reverse_frame_2 - 0.01 15.7 0.6 0.014 15.3 0.6 1.1 1 0 0 1 1 1 0 Transmembrane 52 Thionin PF00321.17 NODE_52640_length_338_cov_992.468647_g44717_i0forward_frame_3 - 0.37 11.3 0.1 0.37 11.3 0.1 2.5 2 1 0 2 2 2 0 Plant thionin NPA PF16469.5 NODE_52636_length_339_cov_1.151316_g44714_i0reverse_frame_3 - 0.031 14.9 0.2 0.04 14.5 0.2 1.1 1 0 0 1 1 1 0 Nematode polyprotein allergen ABA-1 SHIPPO-rpt PF07004.12 NODE_52635_length_339_cov_1.335526_g44713_i0forward_frame_2 - 1.5 9.9 0.2 1.5 9.9 0.2 4.0 4 1 0 4 4 4 0 Sperm-tail PG-rich repeat LNP1 PF15419.6 NODE_52628_length_339_cov_1.506579_g44706_i0reverse_frame_2 - 0.0032 17.7 0.3 0.0037 17.5 0.3 1.1 1 0 0 1 1 1 1 Leukemia NUP98 fusion partner 1 CRM1_repeat_3 PF18787.1 NODE_52620_length_339_cov_1.838816_g44698_i0reverse_frame_3 - 0.061 13.4 0.1 0.18 11.9 0.1 1.8 1 0 0 1 1 1 0 CRM1 / Exportin repeat 3 zf-Sec23_Sec24 PF04810.15 NODE_52620_length_339_cov_1.838816_g44698_i0reverse_frame_2 - 0.031 14.3 0.0 0.05 13.7 0.0 1.4 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger TruD PF01142.18 NODE_52618_length_339_cov_1.937500_g44696_i0reverse_frame_3 - 0.11 11.3 0.1 0.13 11.1 0.1 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) TPR_1 PF00515.28 NODE_52616_length_339_cov_2.049342_g44694_i0forward_frame_3 - 0.0028 17.4 0.5 0.027 14.3 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_52616_length_339_cov_2.049342_g44694_i0forward_frame_3 - 0.003 17.6 0.2 0.066 13.3 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_52616_length_339_cov_2.049342_g44694_i0forward_frame_3 - 0.019 15.5 0.3 0.15 12.6 0.1 2.2 3 0 0 3 3 3 0 Tetratricopeptide repeat AnfG_VnfG PF03139.15 NODE_52616_length_339_cov_2.049342_g44694_i0forward_frame_3 - 0.034 14.2 0.9 0.042 13.9 0.9 1.1 1 0 0 1 1 1 0 Vanadium/alternative nitrogenase delta subunit TPR_9 PF13371.6 NODE_52616_length_339_cov_2.049342_g44694_i0forward_frame_3 - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TraG_N PF07916.11 NODE_52612_length_339_cov_2.174342_g44690_i0reverse_frame_3 - 0.014 14.3 0.5 0.015 14.2 0.5 1.1 1 0 0 1 1 1 0 TraG-like protein, N-terminal region SSXT PF05030.12 NODE_52612_length_339_cov_2.174342_g44690_i0forward_frame_2 - 0.0088 15.7 0.9 0.012 15.2 0.0 1.6 2 0 0 2 2 2 1 SSXT protein (N-terminal region) Leader_Erm PF08253.11 NODE_52606_length_339_cov_2.480263_g44684_i0forward_frame_3 - 0.083 13.2 0.2 0.18 12.1 0.2 1.6 1 0 0 1 1 1 0 Erm Leader peptide Pep3_Vps18 PF05131.14 NODE_52605_length_339_cov_2.483553_g44683_i0forward_frame_2 - 0.014 15.2 0.1 0.022 14.6 0.1 1.4 1 0 0 1 1 1 0 Pep3/Vps18/deep orange family Jas PF16135.5 NODE_52604_length_339_cov_2.565789_g44682_i0reverse_frame_2 - 0.015 15.5 0.7 0.024 14.8 0.7 1.3 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling Rpr2 PF04032.16 NODE_52604_length_339_cov_2.565789_g44682_i0reverse_frame_2 - 0.015 15.5 0.5 0.017 15.4 0.5 1.2 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zinc_ribbon_4 PF13717.6 NODE_52604_length_339_cov_2.565789_g44682_i0reverse_frame_2 - 0.022 14.6 0.3 0.037 13.9 0.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 NODE_52604_length_339_cov_2.565789_g44682_i0reverse_frame_2 - 0.089 12.6 1.3 0.16 11.8 1.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain DUF782 PF05614.11 NODE_52604_length_339_cov_2.565789_g44682_i0forward_frame_2 - 0.027 14.9 0.5 0.033 14.6 0.5 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) Orf78 PF06024.12 NODE_52601_length_339_cov_2.684211_g44679_i0forward_frame_3 - 1.4 9.2 4.0 23 5.4 4.0 2.1 1 1 0 1 1 1 0 Orf78 (ac78) SelP_C PF04593.14 NODE_52596_length_339_cov_3.266447_g44674_i0reverse_frame_2 - 6.6 6.7 6.4 1.5 8.8 0.1 2.0 1 1 1 2 2 2 0 Selenoprotein P, C terminal region DUF4883 PF16224.5 NODE_52595_length_339_cov_3.322368_g44673_i0reverse_frame_2 - 0.033 14.4 2.2 0.039 14.2 2.2 1.1 1 0 0 1 1 1 0 DOmain of unknown function (DUF4883) DUF4083 PF13314.6 NODE_52595_length_339_cov_3.322368_g44673_i0forward_frame_3 - 0.39 10.7 2.6 1.6 8.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) DUF1139 PF06599.11 NODE_52595_length_339_cov_3.322368_g44673_i0forward_frame_2 - 0.012 15.1 0.1 0.013 14.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1139) Elong-fact-P_C PF09285.11 NODE_52593_length_339_cov_3.467105_g44671_i0reverse_frame_3 - 5e-19 67.8 0.0 6.2e-19 67.5 0.0 1.1 1 0 0 1 1 1 1 Elongation factor P, C-terminal SpoIIM PF01944.17 NODE_52592_length_339_cov_3.549342_g44670_i0forward_frame_3 - 3.1 7.8 7.6 1.6 8.7 4.4 1.8 1 1 1 2 2 2 0 Stage II sporulation protein M Pkinase PF00069.25 NODE_52589_length_339_cov_5.105263_g44667_i0reverse_frame_2 - 4.6e-17 62.3 0.1 6e-17 61.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_52589_length_339_cov_5.105263_g44667_i0reverse_frame_2 - 1.4e-08 34.4 0.0 1.6e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Autoind_bind PF03472.15 NODE_52589_length_339_cov_5.105263_g44667_i0forward_frame_2 - 0.073 12.6 0.1 0.098 12.1 0.1 1.2 1 0 0 1 1 1 0 Autoinducer binding domain HZS_alpha PF18582.1 NODE_52588_length_339_cov_5.559211_g44666_i0forward_frame_3 - 0.027 14.9 0.8 0.037 14.5 0.8 1.2 1 0 0 1 1 1 0 Hydrazine synthase alpha subunit middle domain DUF4386 PF14329.6 NODE_52588_length_339_cov_5.559211_g44666_i0forward_frame_2 - 0.021 14.7 0.8 0.024 14.5 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4386) DUF4548 PF15081.6 NODE_52583_length_339_cov_43.713816_g44661_i0forward_frame_3 - 4.1 7.2 6.4 1.7 8.4 4.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4548) GDP_Man_Dehyd PF16363.5 NODE_52580_length_339_cov_47.723684_g44658_i0reverse_frame_3 - 0.021 14.2 0.0 0.023 14.1 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase PG_binding_1 PF01471.18 NODE_52577_length_339_cov_57.115132_g44655_i0forward_frame_3 - 0.028 14.6 0.0 5.7 7.2 0.0 2.3 2 0 0 2 2 2 0 Putative peptidoglycan binding domain Lipoprotein_3 PF00938.17 NODE_52570_length_339_cov_61.467105_g44648_i0forward_frame_2 - 0.063 13.5 0.3 0.092 12.9 0.3 1.3 1 0 0 1 1 1 0 Lipoprotein CDT1_C PF16679.5 NODE_52563_length_339_cov_73.039474_g44641_i0reverse_frame_3 - 0.026 15.0 0.2 0.094 13.2 0.0 1.8 1 1 1 2 2 2 0 DNA replication factor Cdt1 C-terminal domain E3_UbLigase_RBR PF18091.1 NODE_52563_length_339_cov_73.039474_g44641_i0reverse_frame_2 - 0.2 11.8 6.3 0.12 12.5 1.3 2.2 1 1 1 2 2 2 0 E3 Ubiquitin Ligase RBR C-terminal domain TMEM173 PF15009.6 NODE_52563_length_339_cov_73.039474_g44641_i0forward_frame_2 - 0.21 10.7 3.4 0.22 10.7 3.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 173 Apolipoprotein PF01442.18 NODE_52558_length_339_cov_77.223684_g44636_i0reverse_frame_2 - 0.2 11.5 0.1 0.3 11.0 0.1 1.2 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Adeno_GP19K PF04881.13 NODE_52557_length_339_cov_77.434211_g44635_i0forward_frame_2 - 0.41 10.6 7.8 0.32 11.0 6.6 1.4 1 1 0 1 1 1 0 Adenovirus GP19K APOBEC1 PF18769.1 NODE_52556_length_339_cov_79.565789_g44634_i0forward_frame_2 - 0.023 14.9 0.5 0.031 14.5 0.5 1.2 1 0 0 1 1 1 0 APOBEC1 Phage_holin_2_1 PF04971.12 NODE_52554_length_339_cov_80.351974_g44632_i0reverse_frame_2 - 0.18 11.8 3.0 0.35 10.9 3.0 1.5 1 0 0 1 1 1 0 Bacteriophage P21 holin S Arginase PF00491.21 NODE_52550_length_339_cov_88.062500_g44628_i0reverse_frame_3 - 0.0048 16.4 0.0 0.0065 16.0 0.0 1.1 1 0 0 1 1 1 1 Arginase family BAR_3 PF16746.5 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 7.3e-05 22.6 8.8 0.00034 20.4 8.8 1.8 1 1 0 1 1 1 1 BAR domain of APPL family DUF1840 PF08895.11 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 0.13 12.6 5.3 0.19 12.1 5.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) SNAP-25 PF00835.19 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 0.19 12.1 12.8 3.5 8.0 0.8 3.2 1 1 2 3 3 3 0 SNAP-25 family Wbp11 PF09429.10 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 0.21 12.0 6.4 3.1 8.2 1.0 2.2 1 1 1 2 2 2 0 WW domain binding protein 11 Snapin_Pallidin PF14712.6 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 0.91 10.0 15.4 0.25 11.8 7.2 2.1 1 1 1 2 2 2 0 Snapin/Pallidin DUF3450 PF11932.8 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 1.6 8.0 12.7 1.2 8.4 11.5 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF4962 PF16332.5 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 1.7 7.0 6.3 1.9 6.9 6.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4962) Nrap_D6 PF17407.2 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 3.1 8.0 7.2 3.1 8.0 0.2 2.7 1 1 1 2 2 2 0 Nrap protein domain 6 DUF4400 PF14348.6 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 5 6.6 4.9 6 6.3 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) VPS11_C PF12451.8 NODE_52549_length_339_cov_88.792763_g44627_i0reverse_frame_2 - 5.3 7.3 10.6 24 5.3 0.2 3.6 3 1 0 3 3 3 0 Vacuolar protein sorting protein 11 C terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks236.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks236.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks236.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks236.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pigment_DH PF06324.11 NODE_52542_length_339_cov_102.365132_g44620_i0reverse_frame_3 - 0.097 12.8 1.6 0.2 11.8 0.4 2.3 2 0 0 2 2 2 0 Pigment-dispersing hormone (PDH) Babuvirus_MP PF07234.11 NODE_52542_length_339_cov_102.365132_g44620_i0reverse_frame_2 - 2.9 8.1 5.4 3.7 7.7 5.4 1.3 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF222 PF02720.17 NODE_52540_length_339_cov_118.990132_g44618_i0reverse_frame_3 - 0.054 13.0 0.0 0.056 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF222) GalP_UDP_transf PF01087.22 NODE_52540_length_339_cov_118.990132_g44618_i0forward_frame_3 - 0.015 15.7 0.0 0.018 15.4 0.0 1.1 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, N-terminal domain YCII PF03795.14 NODE_52537_length_339_cov_138.523026_g44615_i0reverse_frame_2 - 2.5e-08 34.2 0.0 3.3e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 YCII-related domain PSI PF01437.25 NODE_52536_length_339_cov_139.213816_g44614_i0forward_frame_3 - 0.0077 16.7 2.1 2.1 9.0 0.2 2.1 2 0 0 2 2 2 2 Plexin repeat FANCL_C PF11793.8 NODE_52532_length_339_cov_226.871711_g40000_i1reverse_frame_2 - 0.018 15.2 0.7 0.027 14.6 0.7 1.5 1 0 0 1 1 1 0 FANCL C-terminal domain HYLS1_C PF15311.6 ORF97996 - 0.19 12.5 0.0 0.23 12.2 0.0 1.2 1 0 0 1 1 1 0 Hydrolethalus syndrome protein 1 C-terminus Sporozoite_P67 PF05642.11 ORF97934 - 2.1 6.3 8.8 2.5 6.1 8.8 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF5533 PF17685.1 ORF96353 - 0.02 15.3 3.7 0.022 15.1 3.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5533) DUF3792 PF12670.7 ORF96353 - 0.044 14.0 3.1 0.067 13.4 3.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) tRNA_bind PF01588.20 ORF96262 - 1.6e-12 47.3 0.3 3.2e-12 46.4 0.1 1.5 2 0 0 2 2 2 1 Putative tRNA binding domain TPR_21 PF09976.9 ORF95327 - 0.075 12.7 0.0 0.099 12.3 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain Reo_sigmaC PF04582.12 ORF94974 - 0.00081 19.7 0.0 0.0011 19.3 0.0 1.2 1 0 0 1 1 1 1 Reovirus sigma C capsid protein C-terminal domain zf-TRM13_CCCH PF11722.8 ORF94619 - 0.027 14.2 1.0 0.027 14.2 1.0 2.0 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein Leu_leader PF08054.11 ORF9453 - 0.18 11.4 0.9 1.3 8.7 0.3 2.3 2 0 0 2 2 2 0 Leucine operon leader peptide rve_3 PF13683.6 ORF92164 - 1.2e-10 41.0 0.0 2e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF92164 - 0.00025 21.1 0.0 0.00036 20.7 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve PF00665.26 ORF92164 - 0.00096 19.3 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain Cas_Csy4 PF09618.10 ORF92067 - 0.11 12.6 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) Gamma-thionin PF00304.20 ORF91724 - 0.04 14.2 1.3 0.24 11.7 0.3 2.2 2 0 0 2 2 2 0 Gamma-thionin family OFeT_1 PF16955.5 ORF91621 - 0.025 14.3 0.2 0.029 14.0 0.2 1.1 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter CAAX_1 PF15895.5 ORF9141 - 0.05 13.5 7.6 0.062 13.2 7.6 1.2 1 0 0 1 1 1 0 CAAX box cerebral protein 1 DUF5549 PF17703.1 ORF91116 - 0.048 13.3 0.3 0.056 13.1 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5549) Androgen_recep PF02166.16 ORF91116 - 0.088 11.6 0.1 0.096 11.5 0.1 1.1 1 0 0 1 1 1 0 Androgen receptor DUF778 PF05608.12 ORF90782 - 0.029 14.8 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) DUF4260 PF14079.6 ORF89823 - 0.17 11.9 1.2 0.21 11.6 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4260) Peptidase_M50 PF02163.22 ORF89268 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 DUF1933 PF09147.10 ORF89004 - 0.053 13.1 0.0 0.061 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1933) Toxin_19 PF08088.12 ORF88160 - 0.052 13.7 0.8 0.052 13.7 0.8 2.1 2 0 0 2 2 2 0 Conotoxin I-superfamily PRP38 PF03371.15 ORF88160 - 0.11 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 PRP38 family PE_PPE_C PF12484.8 ORF87836 - 1 10.3 5.9 0.26 12.2 2.4 1.8 1 1 0 2 2 2 0 Polymorphic PE/PPE proteins C terminal Herpes_US9 PF06072.11 ORF87836 - 3.2 7.7 5.7 0.44 10.5 0.7 1.9 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 DUF202 PF02656.15 ORF8768 - 0.021 15.2 0.2 0.031 14.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF202) DUF2964 PF11177.8 ORF8768 - 0.08 13.1 2.9 0.14 12.4 2.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2964) DUF4077 PF13295.6 ORF8768 - 0.082 12.8 0.1 0.093 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) DUF3098 PF11297.8 ORF8768 - 0.13 11.9 1.8 6.5 6.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) Apis_Csd PF11671.8 ORF87679 - 0.051 13.6 1.3 0.073 13.1 1.3 1.3 1 0 0 1 1 1 0 Complementary sex determiner protein Ribosomal_60s PF00428.19 ORF87356 - 2.2e-18 66.6 7.2 2.6e-18 66.4 7.2 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein Cnl2_NKP2 PF09447.10 ORF85861 - 2.3 8.5 6.2 1.1 9.5 2.9 2.0 2 0 0 2 2 2 0 Cnl2/NKP2 family protein Remorin_C PF03763.13 ORF84855 - 0.07 13.0 3.4 0.1 12.5 3.4 1.2 1 0 0 1 1 1 0 Remorin, C-terminal region TEX13 PF15186.6 ORF83343 - 0.055 13.1 1.5 0.067 12.9 1.5 1.1 1 0 0 1 1 1 0 Testis-expressed sequence 13 protein family DUF778 PF05608.12 ORF83263 - 0.029 14.8 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) zf-P11 PF03854.14 ORF82556 - 0.0039 16.8 2.7 0.0039 16.8 2.7 2.2 2 1 0 2 2 2 1 P-11 zinc finger DUF4106 PF13388.6 ORF8232 - 2.1 7.5 3.8 0.54 9.4 1.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4106) Ribosomal_60s PF00428.19 ORF81719 - 2.2e-18 66.6 7.2 2.6e-18 66.4 7.2 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein Paramyxo_PNT PF14320.6 ORF81273 - 0.18 11.0 0.2 0.23 10.6 0.2 1.2 1 0 0 1 1 1 0 Phosphoprotein P region PNT disordered Rsd_AlgQ PF04353.13 ORF81028 - 0.034 14.1 1.3 0.51 10.3 1.3 2.0 1 1 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Shikimate_dh_N PF08501.11 ORF81028 - 0.08 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain DUF2784 PF10861.8 ORF80106 - 4.4 7.4 6.1 7.7 6.6 1.5 2.2 1 1 1 2 2 2 0 Protein of Unknown function (DUF2784) SWIM PF04434.17 ORF78536 - 2.1 8.1 6.0 0.56 9.9 0.7 2.3 2 0 0 2 2 2 0 SWIM zinc finger MyTH4 PF00784.17 ORF78478 - 0.00097 19.6 10.8 0.26 11.8 0.3 3.0 3 0 0 3 3 3 2 MyTH4 domain DUF4889 PF16230.5 ORF77994 - 0.18 12.1 1.9 0.25 11.6 0.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4889) HNH_2 PF13391.6 ORF77942 - 0.011 15.8 1.6 0.016 15.3 1.6 1.2 1 0 0 1 1 1 0 HNH endonuclease PaO PF08417.12 ORF77604 - 0.15 12.2 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Pheophorbide a oxygenase Tom6 PF17112.5 ORF76830 - 0.45 10.1 1.4 3.8 7.1 0.1 2.5 3 0 0 3 3 3 0 Mitochondrial import receptor subunit Tom6, fungal Adeno_E3_CR2 PF02439.15 ORF75363 - 0.12 12.1 0.4 0.18 11.6 0.4 1.2 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Phage_HK97_TLTM PF06120.11 ORF75363 - 0.19 10.9 6.2 0.84 8.8 5.8 1.8 1 1 0 1 1 1 0 Tail length tape measure protein HTH_Tnp_IS630 PF01710.16 ORF736 - 0.16 12.0 13.3 0.78 9.8 7.8 2.3 1 1 1 2 2 2 0 Transposase LysR_substrate PF03466.20 ORF73450 - 4e-06 26.4 0.1 4.6e-06 26.2 0.1 1.0 1 0 0 1 1 1 1 LysR substrate binding domain zf-RING_10 PF16685.5 ORF72581 - 0.27 11.4 4.2 0.78 9.9 0.2 2.5 2 1 0 2 2 2 0 zinc RING finger of MSL2 SieB PF14163.6 ORF72228 - 5.2 6.6 12.8 0.14 11.6 5.1 1.9 1 1 1 2 2 2 0 Super-infection exclusion protein B DUF2096 PF09869.9 ORF71801 - 0.01 16.0 1.8 0.014 15.5 1.8 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2096) DUF4523 PF15023.6 ORF71801 - 0.055 13.3 2.0 0.062 13.1 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4523) TMPIT PF07851.13 ORF71801 - 0.87 8.8 5.1 1 8.5 5.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF4337 PF14235.6 ORF71801 - 1.4 9.0 4.2 1.5 8.9 3.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) SAWADEE PF16719.5 ORF71075 - 0.13 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 SAWADEE domain Ribosomal_60s PF00428.19 ORF70962 - 2.2e-18 66.6 7.2 2.6e-18 66.4 7.2 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein DUF1003 PF06210.11 ORF70381 - 0.49 10.5 3.3 0.33 11.1 1.7 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) DSPc PF00782.20 ORF69224 - 0.0052 16.6 0.2 0.0057 16.5 0.2 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain DUF212 PF02681.14 ORF69224 - 0.092 12.9 0.2 0.12 12.5 0.2 1.1 1 0 0 1 1 1 0 Divergent PAP2 family Y_phosphatase PF00102.27 ORF69224 - 0.14 11.7 0.2 0.15 11.6 0.2 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase zinc_ribbon_9 PF14369.6 ORF68714 - 0.12 12.6 0.0 0.28 11.5 0.0 1.7 1 1 0 1 1 1 0 zinc-ribbon Peptidase_M50 PF02163.22 ORF68586 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 ApeC PF16977.5 ORF68557 - 0.078 12.9 0.3 0.096 12.6 0.3 1.1 1 0 0 1 1 1 0 C-terminal domain of apextrin SWI2_SNF2 PF18766.1 ORF68335 - 0.09 12.4 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 SWI2/SNF2 ATPase DUF35_N PF12172.8 ORF67937 - 0.98 9.4 5.5 0.12 12.3 1.5 1.6 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Rsd_AlgQ PF04353.13 ORF67301 - 0.034 14.1 1.3 0.51 10.3 1.3 2.0 1 1 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Shikimate_dh_N PF08501.11 ORF67301 - 0.08 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain SAWADEE PF16719.5 ORF66012 - 0.13 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 SAWADEE domain FAM76 PF16046.5 ORF65793 - 0.0017 17.8 6.3 0.0018 17.7 6.3 1.0 1 0 0 1 1 1 1 FAM76 protein DpaA_N PF16924.5 ORF64723 - 0.019 15.0 0.2 0.028 14.5 0.1 1.4 1 1 0 1 1 1 0 Dipicolinate synthase subunit A N-terminal domain BSP PF04450.12 ORF64723 - 0.034 13.9 0.2 0.039 13.7 0.2 1.2 1 0 0 1 1 1 0 Peptidase of plants and bacteria DUF3035 PF11233.8 ORF64723 - 0.066 13.5 0.5 0.084 13.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) PQ-loop PF04193.14 ORF6375 - 2.1e-09 37.0 2.3 2.1e-09 37.0 2.3 1.6 2 0 0 2 2 2 1 PQ loop repeat Adaptin_N PF01602.20 ORF62717 - 0.047 12.2 0.1 0.046 12.3 0.1 1.0 1 0 0 1 1 1 0 Adaptin N terminal region DUF413 PF04219.12 ORF62250 - 6e-39 132.0 0.1 7.1e-39 131.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF LRV_FeS PF05484.11 ORF61569 - 0.052 13.6 0.7 0.099 12.7 0.7 1.4 1 0 0 1 1 1 0 LRV protein FeS4 cluster Viral_DNA_bp PF00747.17 ORF60721 - 0.13 9.4 0.2 0.13 9.4 0.2 1.1 1 0 0 1 1 1 0 ssDNA binding protein SRTM1 PF15872.5 ORF60272 - 0.051 13.7 0.2 0.092 12.9 0.2 1.5 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 Aerolysin PF01117.20 ORF600 - 0.0028 16.9 0.1 0.003 16.8 0.1 1.1 1 0 0 1 1 1 1 Aerolysin toxin OFeT_1 PF16955.5 ORF59607 - 0.025 14.3 0.2 0.029 14.0 0.2 1.1 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter DUF778 PF05608.12 ORF59157 - 0.029 14.8 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) HNH_2 PF13391.6 ORF59100 - 0.011 15.8 1.6 0.016 15.3 1.6 1.2 1 0 0 1 1 1 0 HNH endonuclease Peptidase_M50 PF02163.22 ORF58752 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 AA_permease_2 PF13520.6 ORF57354 - 0.01 14.7 0.8 0.013 14.4 0.8 1.0 1 0 0 1 1 1 0 Amino acid permease SIT PF15330.6 ORF57354 - 0.016 15.6 0.0 0.026 15.0 0.0 1.3 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT ASFV_J13L PF05568.11 ORF57354 - 0.017 14.9 0.3 0.021 14.6 0.3 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein DAG1 PF05454.11 ORF57354 - 0.028 13.8 1.6 0.034 13.5 1.4 1.2 1 1 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) TMEM154 PF15102.6 ORF57354 - 0.068 13.1 0.1 0.089 12.7 0.1 1.3 1 0 0 1 1 1 0 TMEM154 protein family 7tm_7 PF08395.12 ORF57036 - 0.0092 15.2 1.7 0.011 15.0 1.7 1.0 1 0 0 1 1 1 1 7tm Chemosensory receptor Pex24p PF06398.11 ORF55961 - 0.013 14.5 0.1 0.014 14.4 0.1 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin AAA_13 PF13166.6 ORF55961 - 0.047 12.3 0.0 0.052 12.2 0.0 1.0 1 0 0 1 1 1 0 AAA domain Stc1 PF12898.7 ORF54767 - 0.06 13.9 0.8 0.06 13.9 0.8 1.7 2 0 0 2 2 2 0 Stc1 domain dCMP_cyt_deam_1 PF00383.23 ORF54767 - 5.1 7.0 8.2 6.4 6.7 0.7 2.7 3 0 0 3 3 3 0 Cytidine and deoxycytidylate deaminase zinc-binding region Paxillin PF03535.13 ORF54649 - 0.93 9.4 4.7 9.4 6.1 0.5 2.0 1 1 1 2 2 2 0 Paxillin family MRF_C1 PF13887.6 ORF54463 - 0.24 10.6 0.4 0.44 9.8 0.0 1.6 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 Phlebovirus_G2 PF07245.11 ORF54084 - 0.08 11.4 0.2 0.091 11.2 0.2 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G2 RabGAP-TBC PF00566.18 ORF53843 - 1e-30 107.1 6.0 1.1e-30 106.9 6.0 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Pkinase PF00069.25 ORF53818 - 0.011 15.1 0.0 0.014 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain MyTH4 PF00784.17 ORF5335 - 0.00097 19.6 10.8 0.26 11.8 0.3 3.0 3 0 0 3 3 3 2 MyTH4 domain Ank_5 PF13857.6 ORF5319 - 0.0003 21.0 0.0 0.00043 20.5 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF5319 - 0.016 15.7 0.0 0.35 11.4 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat Ank_3 PF13606.6 ORF5319 - 0.095 13.3 0.1 0.28 11.9 0.0 1.7 2 0 0 2 2 2 0 Ankyrin repeat zf-AN1 PF01428.16 ORF5316 - 1.6e-10 41.0 11.5 1.6e-10 41.0 11.5 2.5 3 0 0 3 3 3 1 AN1-like Zinc finger HoxA13_N PF12284.8 ORF52987 - 0.078 13.6 5.7 0.097 13.3 5.7 1.1 1 0 0 1 1 1 0 Hox protein A13 N terminal HTH_Tnp_IS630 PF01710.16 ORF52874 - 0.16 12.0 13.3 0.78 9.8 7.8 2.3 1 1 1 2 2 2 0 Transposase 7TM_GPCR_Sru PF10322.9 ORF52790 - 0.0068 15.8 0.5 0.0078 15.6 0.5 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Sru Na_Ca_ex PF01699.24 ORF52185 - 6.3e-07 29.5 4.9 1.1e-06 28.7 4.6 1.5 1 1 0 1 1 1 1 Sodium/calcium exchanger protein DUF2583 PF10762.9 ORF52185 - 0.087 13.2 2.3 0.1 13.0 0.6 1.9 1 1 2 3 3 3 0 Protein of unknown function (DUF2583) MyTH4 PF00784.17 ORF52109 - 0.00097 19.6 10.8 0.26 11.8 0.3 3.0 3 0 0 3 3 3 2 MyTH4 domain Stc1 PF12898.7 ORF51888 - 0.00086 19.8 3.6 0.0016 18.9 3.6 1.4 1 0 0 1 1 1 1 Stc1 domain EcsB PF05975.12 ORF50598 - 0.0033 16.4 0.3 0.0035 16.3 0.3 1.0 1 0 0 1 1 1 1 Bacterial ABC transporter protein EcsB YidD PF01809.18 ORF50271 - 0.0091 15.9 0.4 0.016 15.1 0.0 1.5 2 0 0 2 2 2 1 Putative membrane protein insertion efficiency factor NYAP_N PF15439.6 ORF50271 - 0.024 13.8 1.1 0.026 13.7 1.1 1.0 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter Sina PF03145.16 ORF47669 - 0.13 12.2 1.6 0.16 11.9 1.6 1.2 1 0 0 1 1 1 0 Seven in absentia protein family RdRP_4 PF02123.16 ORF47513 - 0.095 11.6 0.2 0.12 11.2 0.2 1.0 1 0 0 1 1 1 0 Viral RNA-directed RNA-polymerase Bee_toxin PF17454.2 ORF47181 - 0.18 11.9 1.5 0.35 10.9 1.5 1.5 1 0 0 1 1 1 0 Honey bee toxin PspA_IM30 PF04012.12 ORF46643 - 0.022 14.3 0.4 0.56 9.8 0.4 1.9 1 1 1 2 2 2 0 PspA/IM30 family SlyX PF04102.12 ORF46643 - 0.062 13.9 0.1 0.23 12.1 0.0 1.8 2 0 0 2 2 2 0 SlyX DUF3114 PF11311.8 ORF46643 - 0.07 12.7 0.0 0.082 12.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3114) HMG_box PF00505.19 ORF46579 - 1.5e-17 63.7 9.4 2e-13 50.6 5.4 2.1 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF46579 - 1.4e-14 54.5 8.4 8e-11 42.4 3.5 2.0 2 0 0 2 2 2 2 HMG-box domain THDPS_N PF14790.6 ORF46579 - 0.018 14.9 1.3 2.9 7.7 0.2 2.1 1 1 1 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal FTCD_C PF04961.12 ORF46579 - 0.19 11.5 2.1 0.22 11.3 2.1 1.1 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase Ureide_permease PF07168.11 ORF46579 - 0.46 9.2 1.1 0.53 9.0 1.1 1.1 1 0 0 1 1 1 0 Ureide permease MFS_1 PF07690.16 ORF4537 - 2.4e-05 23.4 0.0 2.6e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ATP_synt_H PF05493.13 ORF4537 - 0.045 14.2 0.0 0.066 13.7 0.0 1.2 1 0 0 1 1 1 0 ATP synthase subunit H DUF4293 PF14126.6 ORF4537 - 0.051 13.8 0.4 0.076 13.3 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4293) FtsX PF02687.21 ORF4537 - 0.26 11.8 3.5 0.37 11.3 3.5 1.2 1 0 0 1 1 1 0 FtsX-like permease family YidD PF01809.18 ORF43982 - 0.0091 15.9 0.4 0.016 15.1 0.0 1.5 2 0 0 2 2 2 1 Putative membrane protein insertion efficiency factor NYAP_N PF15439.6 ORF43982 - 0.024 13.8 1.1 0.026 13.7 1.1 1.0 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter UxuA PF03786.13 ORF43413 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF43413 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF43413 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein rve_3 PF13683.6 ORF4300 - 1.2e-10 41.0 0.0 2e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF4300 - 0.00025 21.1 0.0 0.00036 20.7 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve PF00665.26 ORF4300 - 0.00096 19.3 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain COX17 PF05051.13 ORF41477 - 0.15 12.4 7.4 2.9 8.3 0.7 2.3 2 0 0 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) SID-1_RNA_chan PF13965.6 ORF41047 - 0.081 11.3 0.2 0.084 11.3 0.2 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Astro_capsid_p PF12226.8 ORF41047 - 0.12 11.5 5.3 0.13 11.4 5.3 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein UPF0154 PF03672.13 ORF41047 - 0.13 12.3 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) Claudin_2 PF13903.6 ORF41037 - 0.021 14.6 0.2 0.56 9.9 0.0 2.0 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction FAM91_C PF14648.6 ORF410 - 0.001 18.0 1.5 0.0012 17.8 1.5 1.0 1 0 0 1 1 1 1 FAM91 C-terminus Flp1_like PF16982.5 ORF410 - 0.96 8.9 7.0 1.3 8.5 4.7 2.4 1 1 1 2 2 2 0 Putative Flagellin, Flp1-like, domain BUD22 PF09073.10 ORF39535 - 0.019 14.4 15.7 0.02 14.3 15.7 1.0 1 0 0 1 1 1 0 BUD22 NOA36 PF06524.12 ORF39535 - 0.068 12.5 15.0 0.065 12.5 15.0 1.1 1 0 0 1 1 1 0 NOA36 protein Suf PF05843.14 ORF39535 - 0.18 11.7 7.1 0.27 11.2 7.1 1.3 1 1 0 1 1 1 0 Suppressor of forked protein (Suf) DUF2457 PF10446.9 ORF39535 - 0.93 8.6 18.4 0.92 8.6 18.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Pes-10 PF07149.11 ORF39535 - 0.93 8.5 15.7 0.98 8.4 15.7 1.1 1 0 0 1 1 1 0 Pes-10 PPP4R2 PF09184.11 ORF39535 - 2.1 7.8 16.0 2.3 7.7 16.0 1.0 1 0 0 1 1 1 0 PPP4R2 CDC45 PF02724.14 ORF39535 - 3.9 5.7 13.6 3.7 5.7 13.6 1.1 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 ORF39535 - 4 5.5 19.1 4.1 5.5 19.1 1.0 1 0 0 1 1 1 0 Nop14-like family Presenilin PF01080.17 ORF39535 - 8.1 5.1 4.9 8 5.1 4.9 1.0 1 0 0 1 1 1 0 Presenilin YidD PF01809.18 ORF36845 - 0.0091 15.9 0.4 0.016 15.1 0.0 1.5 2 0 0 2 2 2 1 Putative membrane protein insertion efficiency factor NYAP_N PF15439.6 ORF36845 - 0.024 13.8 1.1 0.026 13.7 1.1 1.0 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter zf-CCCH_3 PF15663.5 ORF36484 - 0.34 11.2 3.3 0.63 10.3 0.9 1.9 1 1 1 2 2 2 0 Zinc-finger containing family Auto_anti-p27 PF06677.12 ORF36435 - 0.076 13.2 1.6 0.076 13.2 1.6 1.9 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) GCFC PF07842.12 ORF35768 - 1.7e-12 47.6 2.9 1.7e-12 47.6 2.9 1.9 2 0 0 2 2 2 1 GC-rich sequence DNA-binding factor-like protein Peptidase_M50 PF02163.22 ORF34491 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Phage_integrase PF00589.22 ORF34120 - 0.0033 17.2 0.2 0.004 16.9 0.2 1.1 1 0 0 1 1 1 1 Phage integrase family DUF836 PF05768.14 ORF34120 - 0.0037 17.6 1.0 0.0055 17.1 1.0 1.3 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) DUF762 PF05555.11 ORF34120 - 0.015 14.9 0.5 0.016 14.8 0.5 1.2 1 0 0 1 1 1 0 Coxiella burnetii protein of unknown function (DUF762) DUF1840 PF08895.11 ORF3303 - 0.052 13.9 4.2 0.072 13.4 4.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) FXa_inhibition PF14670.6 ORF31917 - 0.82 10.0 8.8 1.8 8.9 6.3 2.3 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site EF-hand_7 PF13499.6 ORF31664 - 1.9e-16 60.2 5.1 4.7e-12 46.2 0.4 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF31664 - 3.1e-12 45.1 2.0 3.6e-05 23.0 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF31664 - 5.3e-12 44.6 1.6 5.7e-05 22.7 0.0 3.0 2 1 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF31664 - 4.4e-07 29.1 4.2 0.0012 18.3 0.2 2.7 2 0 0 2 2 2 2 EF hand EF-hand_10 PF14788.6 ORF31664 - 2.2e-06 27.4 1.0 0.016 15.0 0.0 2.4 2 1 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF31664 - 0.00014 21.6 4.1 0.023 14.6 0.2 2.4 1 1 1 2 2 2 2 EF-hand domain pair ATP-cone PF03477.16 ORF31664 - 0.018 15.6 0.3 0.036 14.6 0.1 1.6 2 0 0 2 2 2 0 ATP cone domain SGS PF05002.15 ORF31664 - 0.031 14.4 0.9 0.36 11.0 1.1 2.2 1 1 0 2 2 2 0 SGS domain DUF2267 PF10025.9 ORF31664 - 0.035 14.4 0.0 0.095 13.0 0.0 1.9 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) Diphthami_syn_2 PF01902.17 ORF31664 - 0.038 13.5 0.2 0.043 13.3 0.2 1.4 1 1 0 1 1 1 0 Diphthamide synthase DUF4942 PF13708.6 ORF31664 - 0.061 13.3 0.2 0.2 11.6 0.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4942) ADP_ribosyl_GH PF03747.14 ORF31388 - 1.8e-10 41.0 0.0 2.2e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Sec5 PF15469.6 ORF31388 - 0.079 12.8 0.2 0.089 12.6 0.2 1.3 1 1 0 1 1 1 0 Exocyst complex component Sec5 GluR_Homer-bdg PF10606.9 ORF30941 - 0.0095 16.1 0.1 0.016 15.4 0.1 1.3 1 0 0 1 1 1 1 Homer-binding domain of metabotropic glutamate receptor DNase-RNase PF02577.14 ORF28903 - 0.012 15.2 0.2 0.015 14.9 0.2 1.2 1 0 0 1 1 1 0 Bifunctional nuclease UxuA PF03786.13 ORF28657 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF28657 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF28657 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Peptidase_M50 PF02163.22 ORF27357 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Bd3614-deam PF14439.6 ORF27205 - 0.18 11.8 2.5 12 6.0 0.0 2.2 2 0 0 2 2 2 0 Bd3614-like deaminase P66_CC PF16563.5 ORF26343 - 0.059 13.0 1.3 0.099 12.3 1.3 1.3 1 0 0 1 1 1 0 Coiled-coil and interaction region of P66A and P66B with MBD2 Na_H_antiport_1 PF06965.12 ORF2509 - 5.5e-15 55.1 2.0 6.6e-15 54.8 2.0 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter 1 Ribosomal_60s PF00428.19 ORF24917 - 2.2e-18 66.6 7.2 2.6e-18 66.4 7.2 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein Notch PF00066.17 ORF23268 - 0.01 16.3 1.5 0.023 15.2 1.5 1.6 1 0 0 1 1 1 1 LNR domain PsaN PF05479.11 ORF23268 - 0.053 13.7 0.1 0.14 12.3 0.0 1.7 2 0 0 2 2 2 0 Photosystem I reaction centre subunit N (PSAN or PSI-N) Herpes_UL52 PF03121.15 ORF21933 - 0.092 12.7 0.4 0.092 12.7 0.4 1.7 1 1 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase TEBP_beta PF07404.11 ORF20004 - 7.1 5.9 5.5 7.8 5.7 5.5 1.0 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) BssB_TutG PF18512.1 ORF19982 - 0.12 12.3 1.3 0.16 11.8 0.4 1.7 2 0 0 2 2 2 0 Benzylsuccinate synthase beta subunit DUF778 PF05608.12 ORF18485 - 0.029 14.8 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) DAP10 PF07213.11 ORF18438 - 2 8.4 5.2 0.46 10.5 0.6 1.9 1 1 0 2 2 2 0 DAP10 membrane protein BNIP3 PF06553.12 ORF17714 - 0.088 12.5 3.1 0.11 12.2 3.1 1.1 1 0 0 1 1 1 0 BNIP3 Peptidase_M50 PF02163.22 ORF17323 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 FLYWCH PF04500.16 ORF15310 - 0.19 11.8 2.3 0.54 10.4 0.4 2.1 2 0 0 2 2 2 0 FLYWCH zinc finger domain YabA PF06156.13 ORF152563 - 0.00011 22.8 7.4 0.00011 22.8 7.4 2.0 1 1 1 2 2 2 1 Initiation control protein YabA ZapB PF06005.12 ORF152563 - 0.017 15.5 8.8 0.017 15.5 8.8 2.4 1 1 1 2 2 2 0 Cell division protein ZapB COG2 PF06148.11 ORF152563 - 0.53 10.4 10.9 0.04 14.0 4.2 2.0 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Ubiquitin_4 PF18036.1 ORF152563 - 1 9.4 7.3 0.55 10.3 0.5 2.4 1 1 1 2 2 2 0 Ubiquitin-like domain BRE1 PF08647.11 ORF152563 - 1.1 9.4 21.5 0.66 10.1 9.6 2.3 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase APG6_N PF17675.1 ORF152563 - 1.3 9.6 18.4 1.1 9.8 7.9 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF3435 PF11917.8 ORF152563 - 1.4 7.8 8.8 1.6 7.5 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Allexi_40kDa PF05549.11 ORF152563 - 1.6 8.1 7.9 1.9 7.9 7.9 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF883 PF05957.13 ORF152563 - 2.4 8.8 5.0 5.9 7.6 0.3 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Spc24 PF08286.11 ORF152563 - 6.2 7.1 15.8 85 3.5 15.8 2.0 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 SAWADEE PF16719.5 ORF152241 - 0.13 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 SAWADEE domain MyTH4 PF00784.17 ORF151491 - 0.01 16.3 3.8 0.26 11.8 0.3 2.4 3 0 0 3 3 3 0 MyTH4 domain MORN PF02493.20 ORF150768 - 3.3e-08 32.9 9.4 1.7e-05 24.4 1.6 2.9 3 0 0 3 3 3 2 MORN repeat DUF778 PF05608.12 ORF150565 - 0.029 14.8 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) zf-RAG1 PF10426.9 ORF150501 - 0.016 15.4 0.3 0.028 14.6 0.3 1.4 1 0 0 1 1 1 0 Recombination-activating protein 1 zinc-finger domain Leu_leader PF08054.11 ORF150282 - 0.18 11.4 0.9 1.3 8.7 0.3 2.3 2 0 0 2 2 2 0 Leucine operon leader peptide YfzA PF14118.6 ORF150279 - 0.085 13.3 1.2 0.12 12.8 1.2 1.3 1 0 0 1 1 1 0 YfzA-like protein Peptidase_M50 PF02163.22 ORF148993 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Mago-bind PF09282.10 ORF14794 - 0.024 14.5 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 Mago binding P-II PF00543.22 ORF147498 - 3.8e-41 139.8 1.2 4.3e-41 139.7 1.2 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF3240 PF11582.8 ORF147498 - 0.12 12.5 0.0 0.2 11.8 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3240) YqfD PF06898.11 ORF147166 - 0.024 13.5 0.5 0.031 13.1 0.5 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD OAM_alpha PF16552.5 ORF146374 - 0.095 12.6 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 D-ornithine 4,5-aminomutase alpha-subunit Dynein_light PF01221.18 ORF145385 - 1.4e-41 140.7 1.4 1.8e-41 140.3 1.4 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 Imm48 PF15574.6 ORF145385 - 0.036 13.8 0.1 0.053 13.3 0.1 1.2 1 0 0 1 1 1 0 Immunity protein 48 Sporozoite_P67 PF05642.11 ORF144334 - 2.1 6.3 8.8 2.5 6.1 8.8 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF4889 PF16230.5 ORF143817 - 0.18 12.1 1.9 0.25 11.6 0.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4889) DUF5044 PF16447.5 ORF143462 - 0.34 10.7 1.7 3.9 7.3 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5044) Acetyltransf_11 PF13720.6 ORF142950 - 0.021 15.3 1.2 0.03 14.8 1.2 1.3 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 UxuA PF03786.13 ORF142675 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF142675 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF142675 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Peptidase_M50 PF02163.22 ORF142496 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 DUF4558 PF15104.6 ORF141903 - 1.2e-19 70.2 10.8 1.5e-19 69.8 10.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4558) CshA_NR2 PF18651.1 ORF141903 - 0.032 13.5 1.4 0.045 13.0 0.9 1.4 1 1 1 2 2 2 0 Surface adhesin CshA non-repetitive domain 2 MyTH4 PF00784.17 ORF141062 - 0.054 14.0 0.3 0.054 14.0 0.3 1.9 2 1 1 3 3 3 0 MyTH4 domain DUF3864 PF12980.7 ORF141062 - 0.24 11.7 0.6 5.1 7.5 0.1 2.1 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3864) zf-Tim10_DDP PF02953.15 ORF141021 - 0.0015 18.2 2.7 0.0023 17.5 2.7 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger VATC PF18716.1 ORF141021 - 0.063 13.1 1.3 0.063 13.1 1.3 1.6 2 0 0 2 2 2 0 Vms1-associating treble clef domain SID-1_RNA_chan PF13965.6 ORF140565 - 0.08 11.3 0.1 0.083 11.3 0.1 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Astro_capsid_p PF12226.8 ORF140565 - 0.12 11.5 5.3 0.13 11.4 5.3 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein UPF0154 PF03672.13 ORF140565 - 0.13 12.3 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) 7TM_GPCR_Srt PF10321.9 ORF139140 - 0.0028 16.7 2.5 0.0033 16.5 2.5 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srt DSPc PF00782.20 ORF138226 - 2.2e-23 82.5 0.3 2.5e-23 82.3 0.3 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF138226 - 0.0014 18.3 0.0 0.0014 18.3 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Init_tRNA_PT PF04179.12 ORF138226 - 0.017 15.4 0.0 0.022 15.1 0.0 1.2 1 0 0 1 1 1 0 Rit1 DUSP-like domain PTPlike_phytase PF14566.6 ORF138226 - 0.022 14.9 0.0 0.028 14.6 0.0 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate CDKN3 PF05706.12 ORF138226 - 0.028 14.1 0.0 0.039 13.6 0.0 1.2 1 1 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) PAN_2 PF08276.11 ORF138083 - 0.053 13.6 1.6 0.082 13.0 1.6 1.4 1 0 0 1 1 1 0 PAN-like domain DUF3043 PF11241.8 ORF137443 - 0.048 13.7 0.3 0.06 13.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3043) EF-hand_7 PF13499.6 ORF136111 - 1.9e-16 60.2 5.1 4.7e-12 46.2 0.4 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF136111 - 3.1e-12 45.1 2.0 3.6e-05 23.0 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF136111 - 5.3e-12 44.6 1.6 5.7e-05 22.7 0.0 3.0 2 1 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF136111 - 4.4e-07 29.1 4.2 0.0012 18.3 0.2 2.7 2 0 0 2 2 2 2 EF hand EF-hand_10 PF14788.6 ORF136111 - 2.2e-06 27.4 1.0 0.016 15.0 0.0 2.4 2 1 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF136111 - 0.00014 21.6 4.1 0.023 14.6 0.2 2.4 1 1 1 2 2 2 2 EF-hand domain pair ATP-cone PF03477.16 ORF136111 - 0.018 15.6 0.3 0.036 14.6 0.1 1.6 2 0 0 2 2 2 0 ATP cone domain SGS PF05002.15 ORF136111 - 0.031 14.4 0.9 0.36 11.0 1.1 2.2 1 1 0 2 2 2 0 SGS domain DUF2267 PF10025.9 ORF136111 - 0.035 14.4 0.0 0.095 13.0 0.0 1.9 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) Diphthami_syn_2 PF01902.17 ORF136111 - 0.038 13.5 0.2 0.043 13.3 0.2 1.4 1 1 0 1 1 1 0 Diphthamide synthase DUF4942 PF13708.6 ORF136111 - 0.061 13.3 0.2 0.2 11.6 0.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4942) Apc13p PF05839.11 ORF136034 - 0.16 12.1 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Apc13p protein Hydrophobin_2 PF06766.11 ORF136011 - 0.11 12.4 0.9 1.2 9.1 0.1 2.3 2 0 0 2 2 2 0 Fungal hydrophobin Peptidase_S10 PF00450.22 ORF13549 - 7.7e-14 51.9 0.0 8.2e-14 51.8 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase UxuA PF03786.13 ORF134570 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF134570 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF134570 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Ank_2 PF12796.7 ORF134122 - 5.7e-05 23.6 0.1 6.5e-05 23.4 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF134122 - 0.00015 22.3 0.2 0.00021 21.8 0.2 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF134122 - 0.014 15.7 0.1 0.027 14.8 0.1 1.5 1 1 0 1 1 1 0 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF134122 - 0.053 14.1 0.4 0.51 11.1 0.1 2.2 2 0 0 2 2 2 0 Ankyrin repeat Herpes_UL52 PF03121.15 ORF133264 - 0.021 14.7 0.3 0.034 14.1 0.3 1.4 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase UxuA PF03786.13 ORF132816 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF132816 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF132816 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Ribosomal_S30 PF04758.14 ORF131528 - 0.079 13.2 1.2 2.4 8.4 0.1 2.4 1 1 1 2 2 2 0 Ribosomal protein S30 Tetraspanin PF00335.20 ORF130893 - 0.005 16.6 0.3 0.0051 16.5 0.3 1.1 1 0 0 1 1 1 1 Tetraspanin family Optomotor-blind PF11078.8 ORF130862 - 0.48 11.0 3.6 0.55 10.8 0.8 2.0 2 0 0 2 2 2 0 Optomotor-blind protein N-terminal region DUF384 PF04064.13 ORF13044 - 7.6e-07 28.9 0.0 1.3e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF384) DUF756 PF05506.12 ORF129604 - 0.2 12.6 0.0 0.28 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF756) Cse1 PF08506.10 ORF1292 - 0.076 11.8 0.1 0.22 10.3 0.0 1.7 1 1 1 2 2 2 0 Cse1 BetR PF08667.10 ORF1292 - 0.08 13.0 0.0 0.09 12.8 0.0 1.3 1 0 0 1 1 1 0 BetR domain S4 PF01479.25 ORF128913 - 1e-12 47.6 0.1 1.7e-12 46.8 0.1 1.3 1 0 0 1 1 1 1 S4 domain GUN4 PF05419.12 ORF128883 - 0.14 12.3 0.4 0.26 11.4 0.0 1.5 2 0 0 2 2 2 0 GUN4-like CDC45 PF02724.14 ORF128745 - 0.0092 14.3 4.7 0.01 14.2 4.7 1.1 1 0 0 1 1 1 1 CDC45-like protein Tim54 PF11711.8 ORF128745 - 0.045 12.5 4.6 0.053 12.3 4.6 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Connexin PF00029.19 ORF128745 - 0.062 13.0 3.6 0.076 12.8 3.6 1.1 1 0 0 1 1 1 0 Connexin DNA_pol_phi PF04931.13 ORF128745 - 0.11 10.6 7.7 0.1 10.7 7.7 1.0 1 0 0 1 1 1 0 DNA polymerase phi DUF2828 PF11443.8 ORF128745 - 0.25 9.4 4.1 0.28 9.2 4.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) TRAP_alpha PF03896.16 ORF128745 - 0.34 10.1 6.3 0.4 9.8 6.3 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit DUF789 PF05623.12 ORF128745 - 0.42 10.3 2.9 0.46 10.1 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF789) Sin_N PF04801.13 ORF128745 - 0.44 9.7 7.3 0.45 9.7 7.3 1.1 1 0 0 1 1 1 0 Sin-like protein conserved region Cytomega_UL84 PF06284.11 ORF128745 - 0.47 8.9 2.5 0.48 8.8 2.5 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein VIT1 PF01988.19 ORF128745 - 1.1 9.0 2.1 1.3 8.8 2.1 1.1 1 0 0 1 1 1 0 VIT family Presenilin PF01080.17 ORF128745 - 1.6 7.4 3.0 1.6 7.4 3.0 1.1 1 0 0 1 1 1 0 Presenilin YqfQ PF14181.6 ORF128745 - 5 7.3 9.8 6.4 6.9 9.8 1.1 1 0 0 1 1 1 0 YqfQ-like protein CobT PF06213.12 ORF128745 - 9.1 5.6 15.5 12 5.2 15.5 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Aminotran_1_2 PF00155.21 ORF127818 - 3.1e-13 49.6 0.0 3.4e-13 49.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Osmo_CC PF08946.10 ORF127818 - 0.082 13.2 0.6 2.1 8.7 0.0 2.5 2 1 1 3 3 3 0 Osmosensory transporter coiled coil MyTH4 PF00784.17 ORF127189 - 0.98 9.9 4.0 2.9 8.4 0.4 2.1 1 1 1 2 2 2 0 MyTH4 domain DUF5408 PF17402.2 ORF127189 - 0.99 9.3 2.6 6.7 6.7 0.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5408) zf-MYND PF01753.18 ORF12716 - 0.81 9.8 3.6 1.4 9.0 3.6 1.4 1 0 0 1 1 1 0 MYND finger AAA_10 PF12846.7 ORF126945 - 0.16 10.9 0.0 0.17 10.8 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain YqfD PF06898.11 ORF126834 - 0.024 13.5 0.5 0.031 13.1 0.5 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD Sporozoite_P67 PF05642.11 ORF12602 - 2.1 6.3 8.8 2.5 6.1 8.8 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen SbmA_BacA PF05992.12 ORF12598 - 0.089 12.2 3.7 0.1 12.0 3.7 1.2 1 0 0 1 1 1 0 SbmA/BacA-like family DUF2890 PF11081.8 ORF125179 - 0.094 12.8 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) Ribosomal_L3 PF00297.22 ORF124853 - 1.5e-21 76.8 0.0 1.9e-21 76.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L3 Reo_sigmaC_M PF17750.1 ORF124758 - 0.083 12.8 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 Reovirus sigma C capsid protein triple beta spiral PDCD2_C PF04194.13 ORF124513 - 2.8e-10 40.6 0.6 2.8e-10 40.6 0.6 1.9 1 1 1 2 2 2 1 Programmed cell death protein 2, C-terminal putative domain Peptidase_M50 PF02163.22 ORF124193 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 DNA_pol_phi PF04931.13 ORF124008 - 9.9 4.1 12.3 8.9 4.3 12.3 1.1 1 0 0 1 1 1 0 DNA polymerase phi Peptidase_M50 PF02163.22 ORF123368 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 TilS PF09179.11 ORF122906 - 0.0058 17.1 4.8 0.0097 16.4 4.8 1.4 1 0 0 1 1 1 1 TilS substrate binding domain Peptidase_M50 PF02163.22 ORF122404 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Peptidase_M50 PF02163.22 ORF121843 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Rieske PF00355.26 ORF121583 - 0.7 9.9 5.3 1.2 9.2 5.3 1.3 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain Dicistro_VP4 PF11492.8 ORF121418 - 0.003 17.5 0.4 0.0052 16.7 0.4 1.3 1 0 0 1 1 1 1 Cricket paralysis virus, VP4 Rsd_AlgQ PF04353.13 ORF12106 - 0.034 14.1 1.3 0.51 10.3 1.3 2.0 1 1 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Shikimate_dh_N PF08501.11 ORF12106 - 0.08 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain zf-C2H2_4 PF13894.6 ORF119695 - 0.018 15.8 0.1 0.018 15.8 0.1 2.7 3 0 0 3 3 3 0 C2H2-type zinc finger DUF2070 PF09843.9 ORF118666 - 4.1 5.6 7.6 4.1 5.6 7.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) RIBIOP_C PF04950.12 ORF118354 - 4.1e-05 23.2 0.8 4.5e-05 23.0 0.8 1.1 1 0 0 1 1 1 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal Ribosomal_L35Ae PF01247.18 ORF118354 - 0.058 13.6 0.1 0.13 12.5 0.0 1.6 1 1 1 2 2 2 0 Ribosomal protein L35Ae UxuA PF03786.13 ORF118254 - 0.044 12.6 0.7 0.051 12.4 0.7 1.1 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Ndr PF03096.14 ORF118254 - 0.11 11.2 2.9 0.14 10.8 2.9 1.1 1 0 0 1 1 1 0 Ndr family LMBR1 PF04791.16 ORF118254 - 2.8 6.8 5.3 3.1 6.6 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein zf_ZIC PF18366.1 ORF118163 - 0.14 12.2 0.2 0.23 11.6 0.2 1.3 1 0 0 1 1 1 0 Zic proteins zinc finger domain FAM76 PF16046.5 ORF118131 - 0.0017 17.8 6.3 0.0018 17.7 6.3 1.0 1 0 0 1 1 1 1 FAM76 protein ATP-synt_C PF00137.21 ORF117270 - 4.1e-26 91.1 25.2 2.6e-19 69.3 12.7 2.0 2 0 0 2 2 2 2 ATP synthase subunit C Cry1Ac_D5 PF17997.1 ORF117270 - 0.051 13.4 0.0 0.056 13.3 0.0 1.1 1 0 0 1 1 1 0 Insecticidal delta-endotoxin CryIA(c) domain 5 TssN PF17555.2 ORF117270 - 0.29 10.5 2.9 0.77 9.1 0.1 2.0 1 1 1 2 2 2 0 Type VI secretion system, TssN GerA PF03323.13 ORF117270 - 1.4 7.3 6.5 5.5 5.3 0.4 2.2 2 0 0 2 2 2 0 Bacillus/Clostridium GerA spore germination protein TCR_zetazeta PF11628.8 ORF117270 - 5.2 6.8 11.0 0.99 9.1 3.1 2.3 2 0 0 2 2 2 0 T-cell surface glycoprotein CD3 zeta chain DUF4158 PF13700.6 ORF1165 - 0.021 14.7 0.3 0.024 14.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) CHIPS PF11434.8 ORF115946 - 0.051 13.4 0.1 0.077 12.8 0.0 1.4 1 1 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS PHD PF00628.29 ORF114078 - 0.012 15.5 1.1 0.76 9.7 0.0 2.3 2 0 0 2 2 2 0 PHD-finger zf-RING_2 PF13639.6 ORF114078 - 0.032 14.6 2.3 0.27 11.6 0.0 2.4 2 0 0 2 2 2 0 Ring finger domain Zf_RING PF16744.5 ORF114078 - 0.065 13.4 1.3 0.11 12.6 0.0 1.8 2 0 0 2 2 2 0 KIAA1045 RING finger EcsB PF05975.12 ORF112696 - 0.0033 16.4 0.3 0.0035 16.3 0.3 1.0 1 0 0 1 1 1 1 Bacterial ABC transporter protein EcsB Sid-5 PF17204.3 ORF112200 - 0.39 10.9 3.3 1.6 9.0 3.3 1.9 1 1 0 1 1 1 0 Sid-5 family MGC-24 PF05283.11 ORF111996 - 0.024 15.1 1.5 0.026 15.0 1.5 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin BRI3BP PF14965.6 ORF111780 - 3.7 7.0 11.1 4.5 6.8 11.1 1.3 1 0 0 1 1 1 0 Negative regulator of p53/TP53 Med26 PF08711.11 ORF109618 - 0.099 12.7 0.4 0.16 12.0 0.4 1.4 1 0 0 1 1 1 0 TFIIS helical bundle-like domain Carb_kinase PF01256.17 ORF109283 - 6.1e-17 61.9 1.4 7.2e-17 61.7 1.4 1.1 1 0 0 1 1 1 1 Carbohydrate kinase Peptidase_M50 PF02163.22 ORF107818 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 DUF4119 PF13494.6 ORF107327 - 0.076 13.2 0.1 0.13 12.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF4119) Polysacc_synt_C PF14667.6 ORF106152 - 0.27 11.3 3.3 0.36 10.9 0.2 1.9 1 1 1 2 2 2 0 Polysaccharide biosynthesis C-terminal domain Smr PF01713.21 ORF10600 - 6.9e-10 39.2 0.0 9.6e-10 38.7 0.0 1.2 1 0 0 1 1 1 1 Smr domain DUF5532 PF17673.1 ORF10600 - 0.2 11.7 1.3 0.26 11.4 1.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5532) TEP1_N PF05386.11 ORF105354 - 0.092 12.3 0.3 0.092 12.3 0.3 2.1 3 0 0 3 3 3 0 TEP1 N-terminal domain HOK_GEF PF01848.16 ORF104348 - 0.42 10.1 5.1 0.95 8.9 5.1 1.6 1 0 0 1 1 1 0 Hok/gef family TonB_dep_Rec PF00593.24 ORF104095 - 7.4e-07 29.4 0.5 7.7e-07 29.3 0.5 1.0 1 0 0 1 1 1 1 TonB dependent receptor DUF2695 PF10905.8 ORF104095 - 0.058 13.6 0.1 0.1 12.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2695) Gag_p19 PF02228.16 ORF103762 - 0.07 13.6 0.1 0.094 13.2 0.1 1.3 1 0 0 1 1 1 0 Major core protein p19 Peptidase_M50 PF02163.22 ORF103328 - 0.27 10.5 1.6 0.34 10.1 1.6 1.3 1 0 0 1 1 1 0 Peptidase family M50 Sporozoite_P67 PF05642.11 ORF101976 - 2.1 6.3 8.8 2.5 6.1 8.8 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF974 PF06159.13 ORF101684 - 3.4e-06 27.1 0.6 4.1e-06 26.8 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF974) UPF0139 PF03669.13 ORF100377 - 2.5e-14 52.9 0.1 3e-14 52.6 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0139) DUF4804 PF16062.5 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.0034 16.3 0.1 0.0038 16.1 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4804) ABC_membrane_3 PF13748.6 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.0059 15.9 0.4 0.0073 15.6 0.4 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region BRE1 PF08647.11 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.0097 16.0 0.5 0.014 15.4 0.5 1.4 1 1 0 1 1 1 1 BRE1 E3 ubiquitin ligase Noelin-1 PF12308.8 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.031 14.2 0.4 0.043 13.8 0.4 1.3 1 0 0 1 1 1 0 Neurogenesis glycoprotein Med4 PF10018.9 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.054 13.2 3.6 0.099 12.3 3.6 1.3 1 1 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 ArnB_C PF18677.1 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.056 13.6 0.0 0.12 12.5 0.0 1.5 1 1 0 1 1 1 0 Archaellum regulatory network B, C-terminal domain DUF2935 PF11155.8 NODE_53424_length_331_cov_0.945946_g45498_i0reverse_frame_1 - 0.088 13.1 1.1 0.15 12.4 0.4 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) DUF4282 PF14110.6 NODE_53422_length_331_cov_1.331081_g45496_i0reverse_frame_1 - 0.035 14.8 0.1 0.052 14.3 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) NotI PF12183.8 NODE_53420_length_331_cov_1.746622_g45494_i0forward_frame_1 - 0.03 13.7 0.7 0.033 13.5 0.7 1.1 1 0 0 1 1 1 0 Restriction endonuclease NotI Cys_rich_KTR PF14205.6 NODE_53418_length_331_cov_1.881757_g45492_i0reverse_frame_1 - 0.0035 17.1 0.2 0.0075 16.0 0.2 1.5 1 0 0 1 1 1 1 Cysteine-rich KTR YppF PF14178.6 NODE_53417_length_331_cov_1.888514_g45491_i0forward_frame_1 - 0.00065 19.5 0.5 0.0013 18.6 0.5 1.6 1 0 0 1 1 1 1 YppF-like protein DUF456 PF04306.13 NODE_53414_length_331_cov_2.064189_g45488_i0reverse_frame_1 - 0.18 12.1 1.6 0.24 11.7 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF456) IU_nuc_hydro PF01156.19 NODE_53414_length_331_cov_2.064189_g45488_i0forward_frame_1 - 3.8e-26 92.4 0.0 4.5e-26 92.1 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase HTH_28 PF13518.6 NODE_53410_length_331_cov_2.216216_g45484_i0forward_frame_1 - 0.06 13.5 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain v110 PF01639.17 NODE_53408_length_331_cov_2.300676_g45482_i0reverse_frame_1 - 3.4 7.6 10.1 6.5 6.7 10.1 1.6 1 1 1 2 2 2 0 Viral family 110 zinc_ribbon_9 PF14369.6 NODE_53405_length_331_cov_2.472973_g45479_i0reverse_frame_1 - 0.054 13.8 0.2 0.1 12.9 0.2 1.4 1 0 0 1 1 1 0 zinc-ribbon # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks237.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks237.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks237.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks237.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LSR PF05624.14 NODE_53396_length_331_cov_3.449324_g45470_i0reverse_frame_1 - 0.13 12.3 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Lipolysis stimulated receptor (LSR) DUF5345 PF17280.2 NODE_53396_length_331_cov_3.449324_g45470_i0reverse_frame_1 - 1.8 8.6 4.6 0.57 10.2 0.3 2.0 1 1 0 2 2 2 0 Family of unknown function (DUF5345) DUF3810 PF12725.7 NODE_53396_length_331_cov_3.449324_g45470_i0forward_frame_1 - 0.7 9.2 4.2 0.75 9.1 4.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Mito_carr PF00153.27 NODE_53391_length_331_cov_41.432432_g45465_i0reverse_frame_1 - 0.00029 20.7 0.0 0.0005 19.9 0.0 1.4 1 0 0 1 1 1 1 Mitochondrial carrier protein JIP_LZII PF16471.5 NODE_53384_length_331_cov_60.320946_g45458_i0forward_frame_1 - 8e-05 22.7 11.7 8e-05 22.7 11.7 2.1 1 1 1 2 2 2 1 JNK-interacting protein leucine zipper II Cluap1 PF10234.9 NODE_53384_length_331_cov_60.320946_g45458_i0forward_frame_1 - 0.0042 16.5 8.4 0.0047 16.4 8.4 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 FapA PF03961.13 NODE_53384_length_331_cov_60.320946_g45458_i0forward_frame_1 - 9.3 4.7 12.4 11 4.5 12.4 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF3333 PF11812.8 NODE_53383_length_331_cov_61.959459_g45457_i0reverse_frame_1 - 0.0013 19.0 0.4 0.0016 18.6 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3333) SieB PF14163.6 NODE_53383_length_331_cov_61.959459_g45457_i0reverse_frame_1 - 0.031 13.8 0.8 0.038 13.5 0.8 1.3 1 0 0 1 1 1 0 Super-infection exclusion protein B DUF2789 PF10982.8 NODE_53383_length_331_cov_61.959459_g45457_i0reverse_frame_1 - 0.13 12.4 0.1 0.26 11.5 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2789) Glyco_transf_25 PF01755.17 NODE_53378_length_331_cov_75.472973_g45452_i0reverse_frame_1 - 0.0056 16.6 0.0 0.011 15.6 0.0 1.5 2 0 0 2 2 2 1 Glycosyltransferase family 25 (LPS biosynthesis protein) DUF4773 PF15998.5 NODE_53371_length_331_cov_88.584459_g45445_i0forward_frame_1 - 0.025 15.1 0.9 0.032 14.8 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4773) TetR PF13972.6 NODE_53370_length_331_cov_91.253378_g45444_i0forward_frame_1 - 0.0078 15.9 0.1 0.0094 15.7 0.1 1.2 1 0 0 1 1 1 1 Bacterial transcriptional repressor SF3A3 PF16837.5 NODE_53370_length_331_cov_91.253378_g45444_i0forward_frame_1 - 1.1 9.8 5.1 5.8 7.5 5.1 2.0 1 1 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 TcpQ PF10671.9 NODE_53366_length_331_cov_103.364865_g45440_i0forward_frame_1 - 0.035 14.2 0.1 0.07 13.3 0.1 1.5 1 0 0 1 1 1 0 Toxin co-regulated pilus biosynthesis protein Q DUF4131 PF13567.6 NODE_53365_length_331_cov_117.766892_g45439_i0forward_frame_1 - 0.47 10.1 4.0 0.39 10.3 3.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) GlcNAc PF11397.8 NODE_53359_length_331_cov_221.108108_g45433_i0reverse_frame_1 - 0.025 14.1 0.5 0.029 13.8 0.5 1.0 1 0 0 1 1 1 0 Glycosyltransferase (GlcNAc) ENOD40 PF08247.11 NODE_53358_length_331_cov_242.097973_g45432_i0reverse_frame_1 - 4.1 7.6 5.7 45 4.4 5.7 2.4 1 1 0 1 1 1 0 ENOD40 protein INSC_LBD PF16748.5 NODE_53358_length_331_cov_242.097973_g45432_i0forward_frame_1 - 0.027 13.9 0.9 0.04 13.4 0.2 1.5 2 0 0 2 2 2 0 Inscuteable LGN-binding domain SBP56 PF05694.11 NODE_53349_length_331_cov_7976.530405_g45423_i0reverse_frame_1 - 0.2 10.5 0.4 0.23 10.2 0.4 1.1 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) Ammonium_transp PF00909.21 NODE_53349_length_331_cov_7976.530405_g45423_i0forward_frame_1 - 4.2e-07 29.0 0.0 5e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family Ribosomal_L24e PF01246.20 NODE_53341_length_332_cov_1.818182_g45415_i0reverse_frame_1 - 2.3 8.5 6.9 0.98 9.7 3.6 2.1 1 1 1 2 2 2 0 Ribosomal protein L24e Kinesin PF00225.23 NODE_53336_length_332_cov_2.063973_g45410_i0reverse_frame_1 - 4.4e-32 111.3 1.6 5e-32 111.2 1.6 1.0 1 0 0 1 1 1 1 Kinesin motor domain FBA_2 PF07735.17 NODE_53335_length_332_cov_2.094276_g45409_i0forward_frame_1 - 0.013 15.6 2.5 0.013 15.6 2.5 2.2 1 1 1 2 2 2 0 F-box associated zf-CCCH PF00642.24 NODE_53332_length_332_cov_2.239057_g45406_i0forward_frame_1 - 5.1e-06 26.3 1.0 5.1e-06 26.3 1.0 1.9 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_53332_length_332_cov_2.239057_g45406_i0forward_frame_1 - 0.11 12.6 2.9 0.2 11.7 1.1 2.2 2 0 0 2 2 2 0 Zinc finger domain zf-CCCH_2 PF14608.6 NODE_53332_length_332_cov_2.239057_g45406_i0forward_frame_1 - 0.76 10.3 0.2 0.76 10.3 0.2 3.1 3 1 0 3 3 3 0 RNA-binding, Nab2-type zinc finger cNMP_binding PF00027.29 NODE_53331_length_332_cov_2.282828_g45405_i0reverse_frame_1 - 5.4e-06 26.4 0.0 7.7e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF1830 PF08865.11 NODE_53331_length_332_cov_2.282828_g45405_i0reverse_frame_1 - 0.064 13.3 0.9 0.27 11.3 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1830) DUF3251 PF11622.8 NODE_53313_length_332_cov_4.518519_g45388_i0forward_frame_1 - 1.8e-26 92.8 0.1 2.8e-26 92.1 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3251) zf-C2HC5 PF06221.13 NODE_53313_length_332_cov_4.518519_g45388_i0forward_frame_1 - 0.026 14.5 0.2 0.045 13.8 0.2 1.4 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type Lem_TRP PF08262.11 NODE_53312_length_332_cov_4.582492_g45387_i0forward_frame_1 - 3.1 8.0 0.0 3.1 8.0 0.0 4.0 3 1 0 3 3 3 0 Leucophaea maderae tachykinin-related peptide Lamprin PF06403.11 NODE_53312_length_332_cov_4.582492_g45387_i0forward_frame_1 - 3.9 7.4 18.8 0.46 10.4 5.9 2.1 1 1 1 2 2 2 0 Lamprin Pkinase PF00069.25 NODE_53310_length_332_cov_12.377104_g45385_i0forward_frame_1 - 6.7e-05 22.4 0.2 7.9e-05 22.1 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF3385 PF11865.8 NODE_53306_length_332_cov_23.720539_g45381_i0reverse_frame_1 - 0.082 12.8 0.4 0.099 12.5 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) DUF2700 PF10912.8 NODE_53300_length_332_cov_53.090909_g45375_i0reverse_frame_1 - 0.0047 17.0 2.6 0.0051 16.9 2.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2700) Mrx7 PF10906.8 NODE_53297_length_332_cov_62.841751_g45372_i0forward_frame_1 - 0.031 14.5 0.1 0.12 12.7 0.0 1.8 2 0 0 2 2 2 0 MIOREX complex component 7 TMEM208_SND2 PF05620.11 NODE_53295_length_332_cov_70.764310_g45370_i0reverse_frame_1 - 1.7 8.4 4.9 2.4 7.9 4.9 1.3 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 FPN1 PF06963.12 NODE_53294_length_332_cov_77.414141_g45369_i0reverse_frame_1 - 0.21 10.1 0.3 0.28 9.7 0.3 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) IGFBP PF00219.18 NODE_53293_length_332_cov_80.121212_g45368_i0reverse_frame_1 - 7.4 7.3 14.4 1.9 9.2 9.3 2.0 1 1 1 2 2 2 0 Insulin-like growth factor binding protein Dak2 PF02734.17 NODE_53287_length_332_cov_94.154882_g45362_i0forward_frame_1 - 0.16 11.8 0.0 0.19 11.6 0.0 1.0 1 0 0 1 1 1 0 DAK2 domain FSH1 PF03959.13 NODE_53285_length_332_cov_105.181818_g45360_i0forward_frame_1 - 1.5e-11 44.4 0.0 1.7e-11 44.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase (FSH1) LAX PF15681.5 NODE_53284_length_332_cov_116.037037_g45359_i0reverse_frame_1 - 0.28 9.9 0.7 0.34 9.7 0.7 1.1 1 0 0 1 1 1 0 Lymphocyte activation family X DUF2547 PF10818.8 NODE_53280_length_332_cov_131.222222_g45355_i0reverse_frame_1 - 0.079 13.9 0.0 0.098 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) DUF5557 PF17712.1 NODE_53279_length_332_cov_135.363636_g45354_i0forward_frame_1 - 0.094 12.7 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5557) cNMP_binding PF00027.29 NODE_53270_length_332_cov_207.212121_g45345_i0reverse_frame_1 - 0.006 16.6 0.2 0.019 15.0 0.1 1.8 2 1 1 3 3 3 1 Cyclic nucleotide-binding domain Hormone_1 PF00103.20 NODE_53270_length_332_cov_207.212121_g45345_i0reverse_frame_1 - 0.027 14.2 2.4 0.035 13.8 2.0 1.3 1 1 0 1 1 1 0 Somatotropin hormone family Sec2p PF06428.11 NODE_53270_length_332_cov_207.212121_g45345_i0reverse_frame_1 - 0.049 13.6 1.1 0.049 13.6 1.1 1.9 2 0 0 2 2 2 0 GDP/GTP exchange factor Sec2p Spo7_2_N PF15407.6 NODE_53270_length_332_cov_207.212121_g45345_i0reverse_frame_1 - 0.087 12.5 0.1 0.087 12.5 0.1 2.0 2 1 1 3 3 3 0 Sporulation protein family 7 FixQ PF05545.11 NODE_53270_length_332_cov_207.212121_g45345_i0forward_frame_1 - 9 6.4 13.1 0.55 10.2 2.4 2.2 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ SANTA PF09133.10 NODE_53265_length_332_cov_318.296296_g45340_i0forward_frame_1 - 0.11 13.0 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 SANTA (SANT Associated) DUF1682 PF07946.14 NODE_53262_length_332_cov_646.343434_g45337_i0reverse_frame_1 - 0.059 12.6 8.3 0.063 12.5 8.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Connexin PF00029.19 NODE_53262_length_332_cov_646.343434_g45337_i0reverse_frame_1 - 0.13 12.0 1.8 0.15 11.8 1.8 1.2 1 0 0 1 1 1 0 Connexin ALMT PF11744.8 NODE_53262_length_332_cov_646.343434_g45337_i0reverse_frame_1 - 6.8 5.4 7.4 7 5.4 7.4 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter 7tm_3 PF00003.22 NODE_53262_length_332_cov_646.343434_g45337_i0forward_frame_1 - 0.043 13.5 4.6 0.041 13.6 4.6 1.1 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR Coagulin PF02035.15 NODE_53257_length_333_cov_1.073826_g45332_i0reverse_frame_1 - 0.066 13.1 0.8 1.2 9.0 0.0 2.0 1 1 0 2 2 2 0 Coagulin Mit_proteolip PF08039.11 NODE_53253_length_333_cov_1.197987_g45328_i0forward_frame_1 - 0.0072 16.7 0.2 0.012 16.0 0.2 1.5 1 0 0 1 1 1 1 Mitochondrial proteolipid AAA_8 PF12780.7 NODE_53248_length_333_cov_1.540268_g45323_i0forward_frame_1 - 1.1e-05 24.9 0.0 1.3e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 DUF1582 PF07621.11 NODE_53246_length_333_cov_1.580537_g45321_i0reverse_frame_1 - 0.026 14.4 0.3 0.06 13.3 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1582) Barwin PF00967.17 NODE_53246_length_333_cov_1.580537_g45321_i0forward_frame_1 - 0.074 12.9 0.3 0.1 12.5 0.3 1.2 1 0 0 1 1 1 0 Barwin family RTP1_C1 PF10363.9 NODE_53235_length_333_cov_1.936242_g45310_i0forward_frame_1 - 0.11 12.7 0.5 0.14 12.3 0.5 1.3 1 1 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF2700 PF10912.8 NODE_53227_length_333_cov_2.258389_g45302_i0forward_frame_1 - 0.0014 18.7 0.5 0.0017 18.4 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2700) Papo_T_antigen PF02380.15 NODE_53226_length_333_cov_2.302013_g45301_i0forward_frame_1 - 0.054 13.6 1.4 0.076 13.2 1.4 1.2 1 0 0 1 1 1 0 T-antigen specific domain DUF4345 PF14248.6 NODE_53222_length_333_cov_2.442953_g45297_i0forward_frame_1 - 0.058 13.3 0.1 0.093 12.6 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4345) DUF4345 PF14248.6 NODE_53216_length_333_cov_2.577181_g45291_i0forward_frame_1 - 0.074 13.0 0.1 0.12 12.3 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4345) ubiquitin PF00240.23 NODE_53207_length_333_cov_3.328859_g45282_i0reverse_frame_1 - 6.9e-09 35.3 0.0 1.2e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_53207_length_333_cov_3.328859_g45282_i0reverse_frame_1 - 0.024 14.4 0.0 0.036 13.9 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 NODE_53207_length_333_cov_3.328859_g45282_i0reverse_frame_1 - 0.027 14.8 0.0 0.034 14.5 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-like domain Ubiquitin_4 PF18036.1 NODE_53207_length_333_cov_3.328859_g45282_i0reverse_frame_1 - 0.028 14.4 0.1 0.85 9.7 0.0 2.1 1 1 1 2 2 2 0 Ubiquitin-like domain MUG113 PF13455.6 NODE_53203_length_333_cov_4.171141_g45278_i0reverse_frame_1 - 0.069 13.8 0.0 0.099 13.3 0.0 1.2 1 0 0 1 1 1 0 Meiotically up-regulated gene 113 SSTK-IP PF15836.5 NODE_53203_length_333_cov_4.171141_g45278_i0reverse_frame_1 - 0.1 12.7 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 SSTK-interacting protein, TSSK6-activating co-chaperone protein CSN5_C PF18323.1 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.066 14.1 5.6 0.11 13.4 5.6 1.4 1 1 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain DUF1664 PF07889.12 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.08 13.0 5.4 0.095 12.7 4.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) CENP-F_leu_zip PF10473.9 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.095 12.7 14.1 0.36 10.9 14.1 1.7 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IL15 PF02372.15 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.1 12.6 4.8 0.13 12.3 4.8 1.2 1 0 0 1 1 1 0 Interleukin 15 Syntaxin_2 PF14523.6 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.27 11.6 8.9 0.39 11.1 8.9 1.3 1 0 0 1 1 1 0 Syntaxin-like protein APG6_N PF17675.1 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.42 11.1 16.4 1.5 9.4 16.4 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF3340 PF11818.8 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 0.52 10.5 12.0 1 9.5 12.0 1.5 1 1 0 1 1 1 0 C-terminal domain of tail specific protease (DUF3340) DUF948 PF06103.11 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 1.4 9.3 3.9 18 5.7 0.9 2.1 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) FlxA PF14282.6 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 1.4 8.9 9.3 0.11 12.6 1.5 2.1 2 0 0 2 2 2 0 FlxA-like protein DUF349 PF03993.12 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 3 8.2 10.9 22 5.4 9.8 2.2 1 1 1 2 2 2 0 Domain of Unknown Function (DUF349) YabA PF06156.13 NODE_53200_length_333_cov_37.030201_g45275_i0forward_frame_1 - 6.7 7.4 10.9 5.8 7.6 2.3 2.1 1 1 1 2 2 2 0 Initiation control protein YabA Spem1 PF15670.5 NODE_53199_length_333_cov_37.926174_g45274_i0reverse_frame_1 - 0.068 12.7 3.6 0.072 12.7 3.6 1.2 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF1604 PF07713.13 NODE_53199_length_333_cov_37.926174_g45274_i0reverse_frame_1 - 0.63 9.9 9.2 1.8 8.5 9.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1604) TAF8_C PF10406.9 NODE_53198_length_333_cov_39.550336_g45273_i0reverse_frame_1 - 0.046 14.3 0.7 0.073 13.6 0.7 1.3 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term Paramyxo_NS_C PF02725.14 NODE_53198_length_333_cov_39.550336_g45273_i0reverse_frame_1 - 0.24 11.5 0.5 0.28 11.3 0.5 1.1 1 0 0 1 1 1 0 Non-structural protein C TPR_7 PF13176.6 NODE_53197_length_333_cov_47.939597_g45272_i0reverse_frame_1 - 0.0002 21.2 0.2 0.00035 20.4 0.2 1.6 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_53197_length_333_cov_47.939597_g45272_i0reverse_frame_1 - 0.00079 19.4 0.3 0.0033 17.4 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_53197_length_333_cov_47.939597_g45272_i0reverse_frame_1 - 0.0038 17.7 1.5 0.09 13.5 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_53197_length_333_cov_47.939597_g45272_i0reverse_frame_1 - 0.0047 16.7 0.0 0.0087 15.8 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_53197_length_333_cov_47.939597_g45272_i0reverse_frame_1 - 0.008 16.3 0.0 0.018 15.2 0.0 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_53197_length_333_cov_47.939597_g45272_i0reverse_frame_1 - 0.011 16.0 0.2 0.051 13.9 0.0 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_53197_length_333_cov_47.939597_g45272_i0reverse_frame_1 - 0.043 14.6 0.6 0.25 12.3 0.6 2.1 1 1 0 1 1 1 0 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_53197_length_333_cov_47.939597_g45272_i0reverse_frame_1 - 0.05 13.8 0.2 0.11 12.7 0.1 1.6 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 NODE_53197_length_333_cov_47.939597_g45272_i0reverse_frame_1 - 0.14 12.7 0.4 0.24 11.9 0.1 1.6 2 0 0 2 2 2 0 Tetratricopeptide repeat SRP-alpha_N PF04086.13 NODE_53195_length_333_cov_54.325503_g45270_i0reverse_frame_1 - 6.5 6.6 13.3 7.3 6.4 13.3 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Nodulin_late PF07127.11 NODE_53188_length_333_cov_65.557047_g45263_i0reverse_frame_1 - 0.051 13.9 0.2 0.094 13.1 0.2 1.4 1 0 0 1 1 1 0 Late nodulin protein S_layer_N PF05123.12 NODE_53186_length_333_cov_66.926174_g45261_i0reverse_frame_1 - 0.0033 17.3 0.1 0.0039 17.1 0.1 1.0 1 0 0 1 1 1 1 S-layer like family, N-terminal region LCIB_C_CA PF18599.1 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.011 15.0 2.7 0.014 14.7 2.7 1.0 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases HemX PF04375.14 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.021 14.1 10.4 0.023 14.0 10.4 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Caps_synth_GfcC PF06251.11 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.026 14.2 3.6 0.03 14.0 3.6 1.1 1 0 0 1 1 1 0 Capsule biosynthesis GfcC FlaC_arch PF05377.11 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.078 13.4 7.7 0.41 11.1 1.9 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Sld5 PF05916.11 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.092 13.2 3.3 0.11 13.0 3.3 1.1 1 0 0 1 1 1 0 GINS complex protein YabA PF06156.13 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 0.11 13.2 12.4 0.038 14.6 9.6 1.5 1 1 0 1 1 1 0 Initiation control protein YabA Prefoldin PF02996.17 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 2.4 8.1 15.0 0.095 12.6 1.9 2.9 1 1 1 3 3 3 0 Prefoldin subunit DUF4407 PF14362.6 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 5.2 6.3 8.7 6.6 6.0 8.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Exonuc_VII_L PF02601.15 NODE_53174_length_333_cov_74.540268_g45249_i0reverse_frame_1 - 7.9 5.9 12.3 9.6 5.7 12.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4169 PF13770.6 NODE_53162_length_333_cov_85.187919_g45237_i0reverse_frame_1 - 0.052 13.8 0.5 0.099 12.9 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4169) SAM_3 PF18016.1 NODE_53162_length_333_cov_85.187919_g45237_i0forward_frame_1 - 0.03 14.1 0.0 0.047 13.5 0.0 1.2 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) GRIP PF01465.20 NODE_53159_length_333_cov_94.305369_g45234_i0forward_frame_1 - 0.004 17.0 0.0 0.0064 16.4 0.0 1.4 1 0 0 1 1 1 1 GRIP domain MBT PF02820.18 NODE_53154_length_333_cov_102.976510_g45229_i0reverse_frame_1 - 0.073 13.4 0.0 0.26 11.7 0.1 1.8 2 0 0 2 2 2 0 mbt repeat GLYCAM-1 PF05242.11 NODE_53147_length_333_cov_163.630872_g45222_i0reverse_frame_1 - 0.11 12.6 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Glycosylation-dependent cell adhesion molecule 1 (GlyCAM-1) GreA_GreB_N PF03449.15 NODE_53137_length_333_cov_274.671141_g45212_i0forward_frame_1 - 0.046 13.9 1.8 0.22 11.7 1.1 2.3 1 1 1 2 2 2 0 Transcription elongation factor, N-terminal AvrM-A PF18241.1 NODE_53137_length_333_cov_274.671141_g45212_i0forward_frame_1 - 0.14 12.6 2.9 0.8 10.1 0.3 2.0 1 1 1 2 2 2 0 Flax-rust effector AvrM-A DUF2890 PF11081.8 NODE_53134_length_333_cov_293.305369_g45209_i0reverse_frame_1 - 0.18 11.9 0.1 0.22 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) Ribosomal_S14 PF00253.21 NODE_53129_length_333_cov_4007.218121_g45204_i0forward_frame_1 - 2.8e-11 43.0 2.6 4.3e-11 42.4 1.4 1.8 1 1 1 2 2 2 1 Ribosomal protein S14p/S29e UPF0242 PF06785.11 NODE_53126_length_334_cov_1.123746_g45201_i0forward_frame_3 - 4.4 7.4 4.4 6.1 6.9 4.4 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Sulfotransfer_1 PF00685.27 NODE_53123_length_334_cov_1.324415_g45198_i0reverse_frame_2 - 0.00027 20.5 0.1 0.0003 20.3 0.1 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 NODE_53123_length_334_cov_1.324415_g45198_i0reverse_frame_2 - 0.016 15.6 0.0 0.029 14.8 0.0 1.3 1 0 0 1 1 1 0 Sulfotransferase family TRM13 PF05206.14 NODE_53123_length_334_cov_1.324415_g45198_i0forward_frame_3 - 2.8 7.4 4.4 3.8 6.9 4.4 1.1 1 0 0 1 1 1 0 Methyltransferase TRM13 MFS_1 PF07690.16 NODE_53122_length_334_cov_1.337793_g45197_i0reverse_frame_3 - 0.0013 17.7 2.1 0.012 14.5 0.1 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF4131 PF13567.6 NODE_53122_length_334_cov_1.337793_g45197_i0reverse_frame_3 - 0.016 14.8 0.5 0.024 14.3 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DUF4500 PF14937.6 NODE_53122_length_334_cov_1.337793_g45197_i0reverse_frame_3 - 0.14 12.2 0.0 0.43 10.6 0.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4500) DUF962 PF06127.11 NODE_53116_length_334_cov_1.461538_g45191_i0forward_frame_3 - 0.03 14.4 3.8 0.046 13.8 3.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF962) Kelch_4 PF13418.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 2.9e-05 24.0 0.0 4.2e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 3.4e-05 24.0 0.0 5.4e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 0.0019 18.4 0.0 0.0027 17.9 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 0.0023 17.9 0.8 0.0051 16.8 0.8 1.5 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 0.13 11.9 0.2 0.19 11.4 0.2 1.2 1 0 0 1 1 1 0 Kelch motif Kelch_2 PF07646.15 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_3 - 0.15 12.1 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_3 PF13415.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 9.8e-08 32.1 0.1 6.3e-07 29.5 0.0 2.0 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 1.2e-06 28.4 0.0 1.6e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 2.1e-05 24.4 0.0 3.3e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Kelch motif Kelch_2 PF07646.15 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 0.00022 21.0 0.0 0.00033 20.5 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 NODE_53115_length_334_cov_1.535117_g45190_i0reverse_frame_2 - 0.00054 20.2 0.0 0.0008 19.6 0.0 1.3 1 0 0 1 1 1 1 Kelch motif PTEN_C2 PF10409.9 NODE_53115_length_334_cov_1.535117_g45190_i0forward_frame_3 - 0.05 13.4 0.0 0.15 11.9 0.0 1.7 1 1 1 2 2 2 0 C2 domain of PTEN tumour-suppressor protein APG12 PF04110.13 NODE_53113_length_334_cov_1.645485_g45188_i0reverse_frame_3 - 0.08 13.4 0.2 0.11 12.9 0.2 1.3 1 0 0 1 1 1 0 Ubiquitin-like autophagy protein Apg12 TetR_C_24 PF17932.1 NODE_53112_length_334_cov_1.695652_g45187_i0forward_frame_2 - 0.11 12.7 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Trp_leader2 PF08056.11 NODE_53112_length_334_cov_1.695652_g45187_i0forward_frame_2 - 0.15 12.1 5.7 0.34 10.9 5.7 1.5 1 0 0 1 1 1 0 Tryptophan operon leader peptide OppC_N PF12911.7 NODE_53111_length_334_cov_1.772575_g45186_i0reverse_frame_3 - 0.23 11.5 3.7 0.33 10.9 3.7 1.2 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C ABC2_membrane_3 PF12698.7 NODE_53111_length_334_cov_1.772575_g45186_i0forward_frame_3 - 0.049 12.7 8.6 0.054 12.6 8.6 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 NODE_53111_length_334_cov_1.772575_g45186_i0forward_frame_3 - 0.16 10.7 2.5 0.16 10.7 2.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DNA_pol_phi PF04931.13 NODE_53110_length_334_cov_1.779264_g45185_i0reverse_frame_2 - 0.25 9.4 0.0 0.3 9.1 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase phi Rubredoxin PF00301.20 NODE_53109_length_334_cov_1.782609_g45184_i0forward_frame_2 - 6.2 6.9 7.7 0.22 11.5 1.2 1.9 2 0 0 2 2 2 0 Rubredoxin NIDO PF06119.14 NODE_53105_length_334_cov_2.013378_g45180_i0forward_frame_2 - 0.055 14.4 0.1 0.082 13.9 0.1 1.4 1 0 0 1 1 1 0 Nidogen-like DUF1823 PF08853.11 NODE_53103_length_334_cov_2.147157_g45178_i0reverse_frame_3 - 0.036 14.3 0.0 0.043 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1823) NiFeSe_Hases PF00374.19 NODE_53103_length_334_cov_2.147157_g45178_i0reverse_frame_3 - 0.041 12.8 0.0 0.043 12.7 0.0 1.0 1 0 0 1 1 1 0 Nickel-dependent hydrogenase Sec20 PF03908.13 NODE_53101_length_334_cov_2.214047_g45176_i0reverse_frame_2 - 0.087 12.8 0.4 0.17 11.8 0.4 1.7 1 1 0 1 1 1 0 Sec20 Gamma-thionin PF00304.20 NODE_53097_length_334_cov_2.264214_g45172_i0forward_frame_3 - 0.066 13.5 3.6 0.12 12.7 3.6 1.4 1 0 0 1 1 1 0 Gamma-thionin family HHV6-IE PF03753.13 NODE_53093_length_334_cov_2.431438_g45168_i0forward_frame_3 - 1.1 6.6 3.8 1.4 6.3 3.8 1.0 1 0 0 1 1 1 0 Human herpesvirus 6 immediate early protein zf-rbx1 PF12678.7 NODE_53091_length_334_cov_2.575251_g45166_i0forward_frame_2 - 0.03 14.6 0.5 0.054 13.8 0.5 1.3 1 0 0 1 1 1 0 RING-H2 zinc finger domain EamA PF00892.20 NODE_53087_length_334_cov_2.712375_g45162_i0forward_frame_3 - 3.9e-08 33.6 13.0 1.1e-06 28.8 2.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family EmrE PF13536.6 NODE_53087_length_334_cov_2.712375_g45162_i0forward_frame_3 - 0.0015 18.2 2.5 0.0016 18.1 2.5 1.2 1 0 0 1 1 1 1 Putative multidrug resistance efflux transporter Mg_trans_NIPA PF05653.14 NODE_53087_length_334_cov_2.712375_g45162_i0forward_frame_3 - 0.093 11.8 0.2 0.093 11.8 0.2 2.2 1 1 1 2 2 2 0 Magnesium transporter NIPA MukF_C PF17193.4 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.027 14.6 1.1 0.033 14.3 1.1 1.2 1 0 0 1 1 1 0 MukF C-terminal domain FAM76 PF16046.5 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.051 12.9 6.5 0.096 12.0 6.5 1.4 1 1 0 1 1 1 0 FAM76 protein TcdB_N PF12918.7 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.09 13.1 0.1 0.09 13.1 0.1 2.4 2 1 0 2 2 2 0 TcdB toxin N-terminal helical domain ABC_tran_Xtn PF12848.7 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.13 12.3 0.3 0.13 12.3 0.3 1.9 2 0 0 2 2 2 0 ABC transporter Col_cuticle_N PF01484.17 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.15 12.2 0.3 0.15 12.2 0.3 2.1 3 0 0 3 3 3 0 Nematode cuticle collagen N-terminal domain Shugoshin_N PF07558.11 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.19 11.6 17.6 3.4 7.6 1.8 3.5 2 1 1 3 3 3 0 Shugoshin N-terminal coiled-coil region TSC22 PF01166.18 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.55 10.6 13.5 0.38 11.1 2.1 3.2 2 2 1 3 3 3 0 TSC-22/dip/bun family bZIP_2 PF07716.15 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.71 10.0 13.3 0.11 12.6 2.8 2.7 3 1 0 3 3 3 0 Basic region leucine zipper V-SNARE PF05008.15 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 0.81 10.1 7.9 0.32 11.4 1.8 2.7 2 1 1 3 3 3 0 Vesicle transport v-SNARE protein N-terminus Fungal_TACC PF12709.7 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 5.2 7.6 11.0 0.55 10.7 2.6 2.4 2 1 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins ZapB PF06005.12 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 6.3 7.3 16.3 5.4 7.5 2.2 2.8 2 2 0 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 7.1 6.5 8.7 23 4.9 3.6 2.4 2 1 0 2 2 2 0 Septum formation initiator bZIP_1 PF00170.21 NODE_53078_length_334_cov_3.183946_g45153_i0forward_frame_3 - 9.9 6.3 15.4 4.6 7.4 5.1 3.0 2 2 0 2 2 2 0 bZIP transcription factor DUF5584 PF17822.1 NODE_53076_length_334_cov_4.127090_g45151_i0forward_frame_2 - 0.015 14.8 8.2 0.017 14.6 8.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5584) DUF3341 PF11821.8 NODE_53075_length_334_cov_4.214047_g45150_i0reverse_frame_3 - 0.14 11.8 1.1 0.15 11.7 0.2 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3341) Sec23_BS PF08033.12 NODE_53073_length_334_cov_22.923077_g45148_i0reverse_frame_3 - 0.23 12.2 8.6 0.48 11.2 8.6 1.5 1 1 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain Rrp44_S1 PF17215.3 NODE_53073_length_334_cov_22.923077_g45148_i0reverse_frame_2 - 0.16 11.9 2.2 0.24 11.4 2.2 1.3 1 0 0 1 1 1 0 S1 domain Mitoc_L55 PF09776.9 NODE_53073_length_334_cov_22.923077_g45148_i0reverse_frame_2 - 0.41 10.4 5.3 3.4 7.4 0.0 2.1 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L55 DUF4514 PF14986.6 NODE_53072_length_334_cov_40.163880_g45147_i0forward_frame_2 - 0.1 12.6 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4514) NFACT-R_1 PF05670.13 NODE_53066_length_334_cov_59.257525_g45141_i0reverse_frame_3 - 9.9e-14 51.9 0.3 2.8e-13 50.5 0.1 1.8 2 0 0 2 2 2 1 NFACT protein RNA binding domain Asp1 PF16993.5 NODE_53066_length_334_cov_59.257525_g45141_i0reverse_frame_3 - 0.0055 16.0 0.0 0.0065 15.7 0.0 1.3 1 0 0 1 1 1 1 Accessory Sec system protein Asp1 Defensin_1 PF00323.19 NODE_53051_length_334_cov_110.765886_g45126_i0forward_frame_2 - 4.4 8.0 14.0 0.32 11.6 2.4 2.9 2 1 0 2 2 2 0 Mammalian defensin DUF3592 PF12158.8 NODE_53047_length_334_cov_124.695652_g45122_i0reverse_frame_3 - 0.032 14.3 0.0 0.045 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) DUF4328 PF14219.6 NODE_53047_length_334_cov_124.695652_g45122_i0reverse_frame_3 - 0.1 12.2 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4328) Sep15_SelM PF08806.11 NODE_53047_length_334_cov_124.695652_g45122_i0forward_frame_3 - 0.027 14.6 0.0 0.037 14.2 0.0 1.2 1 0 0 1 1 1 0 Sep15/SelM redox domain Myticin-prepro PF10690.9 NODE_53047_length_334_cov_124.695652_g45122_i0forward_frame_3 - 0.037 14.3 0.2 0.043 14.1 0.2 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel zf-DNL PF05180.12 NODE_53047_length_334_cov_124.695652_g45122_i0forward_frame_3 - 0.059 13.3 2.1 0.11 12.5 2.1 1.5 1 1 0 1 1 1 0 DNL zinc finger MmgE_PrpD PF03972.14 NODE_53047_length_334_cov_124.695652_g45122_i0forward_frame_2 - 0.053 12.1 0.0 0.059 11.9 0.0 1.0 1 0 0 1 1 1 0 MmgE/PrpD family OTT_1508_deam PF14441.6 NODE_53044_length_334_cov_146.317726_g45119_i0reverse_frame_3 - 0.03 14.3 0.4 0.044 13.8 0.4 1.4 1 0 0 1 1 1 0 OTT_1508-like deaminase Prolamin_like PF05617.11 NODE_53043_length_334_cov_156.438127_g45118_i0reverse_frame_2 - 0.016 15.4 0.4 0.022 14.9 0.3 1.4 1 1 0 1 1 1 0 Prolamin-like zf-C2HC PF01530.18 NODE_53042_length_334_cov_179.585284_g45117_i0reverse_frame_3 - 0.087 13.0 1.9 0.4 10.9 0.1 2.4 2 0 0 2 2 2 0 Zinc finger, C2HC type Glu_dehyd_C PF16912.5 NODE_53040_length_334_cov_195.270903_g45115_i0reverse_frame_3 - 0.07 12.6 0.1 0.09 12.2 0.1 1.1 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus FlpD PF02662.16 NODE_53039_length_334_cov_276.013378_g45114_i0forward_frame_2 - 0.032 14.2 0.1 0.051 13.6 0.1 1.3 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit DUF268 PF03269.14 NODE_53039_length_334_cov_276.013378_g45114_i0forward_frame_2 - 0.061 13.2 0.7 0.098 12.5 0.3 1.5 1 1 1 2 2 2 0 Caenorhabditis protein of unknown function, DUF268 PUF PF00806.19 NODE_53039_length_334_cov_276.013378_g45114_i0forward_frame_2 - 0.09 12.5 0.0 0.22 11.3 0.0 1.7 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat STAT_alpha PF01017.20 NODE_53039_length_334_cov_276.013378_g45114_i0forward_frame_2 - 2.3 8.1 10.8 2.4 8.0 7.3 2.0 1 1 1 2 2 2 0 STAT protein, all-alpha domain KASH PF10541.9 NODE_53029_length_335_cov_1.023333_g45104_i0reverse_frame_3 - 0.004 17.4 0.2 0.004 17.4 0.2 2.1 1 1 1 2 2 2 1 Nuclear envelope localisation domain TMEM238 PF15125.6 NODE_53027_length_335_cov_1.180000_g45102_i0forward_frame_2 - 0.039 14.2 2.5 1.1 9.6 0.0 2.3 2 0 0 2 2 2 0 TMEM238 protein family TRP PF06011.12 NODE_53025_length_335_cov_1.293333_g45100_i0forward_frame_3 - 0.00023 20.0 3.9 0.00027 19.8 3.9 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel zf-C6H2 PF15801.5 NODE_53025_length_335_cov_1.293333_g45100_i0forward_frame_2 - 9.8 6.6 18.5 0.25 11.7 6.6 3.0 2 2 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding EamA PF00892.20 NODE_53016_length_335_cov_1.816667_g45091_i0reverse_frame_3 - 0.0068 16.6 0.1 0.0072 16.5 0.1 1.1 1 0 0 1 1 1 1 EamA-like transporter family HRG PF16954.5 NODE_53016_length_335_cov_1.816667_g45091_i0forward_frame_2 - 0.79 10.2 4.0 0.29 11.6 1.2 1.8 2 0 0 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene TRP PF06011.12 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_3 - 0.01 14.6 10.7 0.011 14.4 10.7 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel PspB PF06667.12 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_3 - 0.21 11.6 0.2 0.21 11.6 0.2 2.3 2 0 0 2 2 2 0 Phage shock protein B DUF4282 PF14110.6 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_3 - 0.32 11.8 9.6 0.18 12.5 7.7 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4282) DUF3270 PF11674.8 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_3 - 0.46 10.7 6.7 0.15 12.2 3.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3270) CrgA PF06781.12 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_3 - 2.2 8.4 5.3 0.3 11.2 0.3 2.0 1 1 1 2 2 2 0 Cell division protein CrgA CobD_Cbib PF03186.13 NODE_53013_length_335_cov_1.896667_g45088_i0reverse_frame_3 - 9.5 5.3 7.6 7 5.8 4.1 1.8 1 1 1 2 2 2 0 CobD/Cbib protein PGAP1 PF07819.13 NODE_53013_length_335_cov_1.896667_g45088_i0forward_frame_2 - 0.06 13.1 0.1 0.064 13.0 0.1 1.1 1 0 0 1 1 1 0 PGAP1-like protein TFIIB PF00382.19 NODE_53008_length_335_cov_2.300000_g45083_i0forward_frame_2 - 0.018 15.1 0.2 0.032 14.3 0.2 1.4 1 0 0 1 1 1 0 Transcription factor TFIIB repeat DUF2768 PF10966.8 NODE_53005_length_335_cov_2.416667_g45080_i0reverse_frame_2 - 9.9 6.7 10.4 0.3 11.6 4.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2768) TatC PF00902.18 NODE_53002_length_335_cov_2.733333_g45077_i0reverse_frame_3 - 0.057 13.2 3.2 0.06 13.2 3.2 1.1 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) Sun2_CC2 PF18580.1 NODE_52998_length_335_cov_2.966667_g45073_i0forward_frame_2 - 0.11 12.8 0.1 0.24 11.7 0.0 1.7 2 0 0 2 2 2 0 SUN2 coiled coil domain 2 TAFII55_N PF04658.13 NODE_52997_length_335_cov_3.233333_g45072_i0forward_frame_3 - 6.9e-17 61.6 0.2 8.8e-17 61.3 0.2 1.1 1 0 0 1 1 1 1 TAFII55 protein conserved region DUF4200 PF13863.6 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_3 - 0.017 15.5 3.4 0.018 15.4 2.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) DivIC PF04977.15 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_3 - 0.065 13.0 0.9 0.099 12.4 0.9 1.3 1 0 0 1 1 1 0 Septum formation initiator MPS2 PF17060.5 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_3 - 0.11 11.7 4.1 0.12 11.6 4.1 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 NEMO PF11577.8 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_2 - 0.0039 17.2 0.9 0.0068 16.4 0.9 1.4 1 0 0 1 1 1 1 NF-kappa-B essential modulator NEMO CCAP PF11105.8 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_2 - 0.0094 15.9 0.5 0.017 15.1 0.3 1.5 1 1 0 1 1 1 1 Arthropod cardioacceleratory peptide 2a CpxA_peri PF16527.5 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_2 - 0.029 14.7 0.3 0.035 14.5 0.3 1.1 1 0 0 1 1 1 0 Two-component sensor protein CpxA, periplasmic domain PVL_ORF50 PF07768.11 NODE_52995_length_335_cov_3.256667_g45070_i0forward_frame_2 - 0.061 13.6 1.6 0.08 13.3 1.6 1.1 1 0 0 1 1 1 0 PVL ORF-50-like family DivIC PF04977.15 NODE_52994_length_335_cov_3.653333_g45069_i0reverse_frame_3 - 0.058 13.2 0.6 0.089 12.6 0.6 1.3 1 0 0 1 1 1 0 Septum formation initiator NEMO PF11577.8 NODE_52994_length_335_cov_3.653333_g45069_i0reverse_frame_2 - 0.0035 17.3 1.4 0.0061 16.6 1.4 1.4 1 0 0 1 1 1 1 NF-kappa-B essential modulator NEMO CCAP PF11105.8 NODE_52994_length_335_cov_3.653333_g45069_i0reverse_frame_2 - 0.011 15.7 0.7 0.018 15.0 0.4 1.6 1 1 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a PVL_ORF50 PF07768.11 NODE_52994_length_335_cov_3.653333_g45069_i0reverse_frame_2 - 0.099 13.0 2.1 0.13 12.6 2.1 1.2 1 0 0 1 1 1 0 PVL ORF-50-like family FumaraseC_C PF10415.9 NODE_52993_length_335_cov_3.753333_g45068_i0reverse_frame_2 - 4.1e-23 81.6 0.1 5.1e-23 81.2 0.1 1.1 1 0 0 1 1 1 1 Fumarase C C-terminus Ter PF05472.11 NODE_52993_length_335_cov_3.753333_g45068_i0forward_frame_3 - 2e-14 53.4 0.1 2.4e-14 53.1 0.1 1.1 1 0 0 1 1 1 1 DNA replication terminus site-binding protein (Ter protein) TMEM237 PF15383.6 NODE_52992_length_335_cov_3.780000_g45067_i0reverse_frame_2 - 1.3 8.1 3.8 1.5 7.8 3.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 237 Nop16 PF09420.10 NODE_52991_length_335_cov_3.806667_g45066_i0forward_frame_2 - 0.21 11.6 0.0 0.27 11.2 0.0 1.1 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 Glyco_hydro_67M PF07488.12 NODE_52990_length_335_cov_3.986667_g45065_i0forward_frame_2 - 0.072 12.2 0.0 0.084 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 middle domain PsbH PF00737.20 NODE_52990_length_335_cov_3.986667_g45065_i0forward_frame_2 - 0.092 12.5 2.7 0.15 11.8 2.7 1.3 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein DUF4044 PF13253.6 NODE_52990_length_335_cov_3.986667_g45065_i0forward_frame_2 - 4.6 6.9 6.2 1.7 8.2 3.7 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4044) DUF1508 PF07411.12 NODE_52989_length_335_cov_4.106667_g45064_i0forward_frame_2 - 0.014 15.2 0.8 0.021 14.7 0.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1508) ApbE PF02424.15 NODE_52989_length_335_cov_4.106667_g45064_i0forward_frame_2 - 0.016 14.8 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 ApbE family Ketoacyl-synt_2 PF13723.6 NODE_52989_length_335_cov_4.106667_g45064_i0forward_frame_2 - 0.13 11.8 0.1 0.14 11.8 0.1 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain Bac_rhamnosid_N PF08531.10 NODE_52988_length_335_cov_5.490000_g45063_i0reverse_frame_2 - 0.0025 17.7 0.0 0.003 17.4 0.0 1.1 1 0 0 1 1 1 1 Alpha-L-rhamnosidase N-terminal domain NPCC PF08058.11 NODE_52988_length_335_cov_5.490000_g45063_i0reverse_frame_2 - 2.5 8.2 7.7 1 9.4 3.1 1.9 1 1 1 2 2 2 0 Nuclear pore complex component CbiQ PF02361.16 NODE_52987_length_335_cov_8.136667_g45062_i0forward_frame_3 - 0.71 9.4 7.3 0.9 9.1 7.3 1.1 1 0 0 1 1 1 0 Cobalt transport protein Pentapeptide_4 PF13599.6 NODE_52986_length_335_cov_10.026667_g45061_i0reverse_frame_2 - 0.042 14.0 0.1 0.056 13.6 0.1 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) Spc7_C2 PF15577.6 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_3 - 0.14 12.2 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Spc7_C2 Rota_NSP4 PF01452.16 NODE_52986_length_335_cov_10.026667_g45061_i0forward_frame_2 - 0.066 12.9 1.0 0.076 12.7 1.0 1.1 1 0 0 1 1 1 0 Rotavirus non structural protein FlaC_arch PF05377.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 4.5e-06 27.0 12.8 0.0027 18.1 1.7 2.3 1 1 0 2 2 2 2 Flagella accessory protein C (FlaC) YkyA PF10368.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 7.4e-06 25.8 17.6 8.6e-06 25.5 17.6 1.0 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein YabA PF06156.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.00039 21.0 12.3 0.03 15.0 4.0 2.1 1 1 1 2 2 2 2 Initiation control protein YabA ZapB PF06005.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0005 20.4 16.1 0.018 15.5 5.2 2.3 1 1 1 2 2 2 2 Cell division protein ZapB CENP-F_leu_zip PF10473.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0013 18.7 14.3 0.0017 18.4 14.3 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PRKG1_interact PF15898.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0018 19.1 13.2 0.003 18.4 13.2 1.5 1 1 0 1 1 1 1 cGMP-dependent protein kinase interacting domain Lebercilin PF15619.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.002 17.8 13.9 0.0028 17.3 13.9 1.2 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease bZIP_1 PF00170.21 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0021 18.1 18.2 0.013 15.6 2.2 3.0 1 1 2 3 3 3 2 bZIP transcription factor TolA_bind_tri PF16331.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0025 17.9 4.2 0.29 11.2 0.6 2.1 1 1 1 2 2 2 1 TolA binding protein trimerisation ABC_tran_CTD PF16326.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0033 17.6 2.0 0.0033 17.6 2.0 2.3 1 1 2 3 3 3 1 ABC transporter C-terminal domain SHE3 PF17078.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0034 17.1 15.7 0.0041 16.9 15.7 1.1 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 bZIP_2 PF07716.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0035 17.4 10.7 0.019 15.0 2.1 2.7 2 1 0 2 2 2 1 Basic region leucine zipper TPR_MLP1_2 PF07926.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0045 17.0 15.0 0.0064 16.6 5.4 2.0 1 1 1 2 2 2 1 TPR/MLP1/MLP2-like protein SCO1-SenC PF02630.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0065 16.4 1.0 1.7 8.6 0.4 2.0 1 1 1 2 2 2 1 SCO1/SenC DUF4201 PF13870.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0071 16.1 14.5 0.017 14.8 14.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) GAS PF13851.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.0084 15.5 4.9 0.0084 15.5 4.9 2.0 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding HAP1_N PF04849.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.01 15.1 4.4 0.01 15.1 4.4 2.0 1 1 1 2 2 2 0 HAP1 N-terminal conserved region Ax_dynein_light PF10211.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.014 15.4 6.1 0.014 15.4 6.1 2.0 1 1 1 2 2 2 0 Axonemal dynein light chain TRAF_BIRC3_bd PF16673.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.014 15.2 1.9 0.031 14.1 0.1 2.3 2 1 1 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain DUF4200 PF13863.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.016 15.6 16.8 0.064 13.7 0.9 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) KELK PF15796.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.022 15.2 11.5 0.1 13.1 1.7 2.2 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase TMF_TATA_bd PF12325.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.024 14.9 13.7 0.11 12.7 13.7 1.8 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DHR10 PF18595.1 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.032 14.3 14.8 0.29 11.2 14.7 2.0 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain DUF3584 PF12128.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.034 11.7 10.8 0.039 11.5 10.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ATG16 PF08614.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.034 14.4 12.8 0.047 13.9 12.8 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Occludin_ELL PF07303.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.038 14.7 2.7 0.038 14.7 2.7 2.0 1 1 1 2 2 2 0 Occludin homology domain Atg14 PF10186.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.038 13.1 11.5 0.06 12.4 11.5 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_MT_bd PF06657.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.04 14.4 6.6 0.11 13.0 1.0 2.5 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 TMPIT PF07851.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.04 13.2 10.1 0.044 13.0 10.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein Rootletin PF15035.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.042 13.9 10.5 0.051 13.6 10.5 1.1 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Sec34 PF04136.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.044 13.7 12.0 0.42 10.5 0.8 2.0 1 1 1 2 2 2 0 Sec34-like family UPF0242 PF06785.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.045 13.9 14.4 0.37 10.9 9.0 2.0 1 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Spc7 PF08317.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.05 12.5 14.6 0.07 12.0 14.6 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein KASH_CCD PF14662.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.05 13.4 15.2 0.4 10.5 4.5 2.0 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH NPV_P10 PF05531.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.061 13.8 13.4 0.14 12.6 2.0 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein CHASE3 PF05227.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.085 12.8 2.9 0.1 12.5 2.9 1.1 1 0 0 1 1 1 0 CHASE3 domain Jnk-SapK_ap_N PF09744.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.086 13.1 13.0 0.4 10.9 13.0 1.8 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 SesA PF17107.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.091 13.0 5.2 0.059 13.6 3.2 1.7 1 1 1 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases GreA_GreB_N PF03449.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.095 12.9 11.1 1.4 9.1 0.2 3.1 2 1 1 3 3 3 0 Transcription elongation factor, N-terminal DUF4047 PF13256.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.11 12.7 7.2 0.043 14.0 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4047) Fez1 PF06818.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.11 12.9 12.9 0.28 11.6 12.9 1.6 1 1 0 1 1 1 0 Fez1 Med30 PF11315.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.11 12.6 8.4 0.15 12.2 8.4 1.2 1 0 0 1 1 1 0 Mediator complex subunit 30 Golgin_A5 PF09787.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.12 11.8 9.5 0.14 11.6 9.5 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.14 11.5 11.3 0.19 11.0 11.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Dor1 PF04124.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.14 10.8 9.8 0.17 10.5 9.8 1.1 1 0 0 1 1 1 0 Dor1-like family Exonuc_VII_L PF02601.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.14 11.7 7.6 0.17 11.4 7.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Herpes_UL6 PF01763.16 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.16 10.5 7.6 0.22 10.0 7.6 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like ADIP PF11559.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.16 12.0 15.0 0.14 12.2 5.2 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF3552 PF12072.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.17 11.3 15.1 0.26 10.7 8.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) BLOC1_2 PF10046.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.18 12.1 15.5 0.043 14.1 5.9 2.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TSNAXIP1_N PF15739.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.19 12.2 12.3 0.29 11.5 6.5 2.1 1 1 1 2 2 2 0 Translin-associated factor X-interacting N-terminus SlyX PF04102.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.19 12.4 4.3 3.2 8.4 4.3 2.4 1 1 0 1 1 1 0 SlyX CENP-H PF05837.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.19 12.1 12.6 1.1 9.6 4.5 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Gaa1 PF04114.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.2 10.6 0.9 0.2 10.6 0.9 1.2 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component CAGE1 PF15066.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.21 10.2 17.6 0.26 9.9 17.6 1.0 1 0 0 1 1 1 0 Cancer-associated gene protein 1 family TSC22 PF01166.18 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.22 11.9 9.2 0.22 11.9 1.1 2.4 1 1 0 2 2 2 0 TSC-22/dip/bun family Herpes_UL14 PF03580.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.23 11.7 6.8 0.34 11.2 6.8 1.2 1 0 0 1 1 1 0 Herpesvirus UL14-like protein SOGA PF11365.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.24 12.5 10.4 0.44 11.7 0.5 2.4 1 1 0 2 2 2 0 Protein SOGA V-SNARE_C PF12352.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.25 11.6 4.0 1.2 9.5 0.0 2.6 3 0 0 3 3 2 0 Snare region anchored in the vesicle membrane C-terminus DUF5082 PF16888.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.28 11.5 14.7 0.33 11.3 4.9 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF2205 PF10224.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.31 11.1 12.5 4.4 7.4 8.5 2.9 1 1 1 2 2 2 0 Short coiled-coil protein DivIC PF04977.15 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.31 10.8 20.1 0.77 9.6 2.9 3.1 1 1 2 3 3 3 0 Septum formation initiator APG6_N PF17675.1 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.32 11.5 14.9 1.3 9.6 15.0 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region WXG100 PF06013.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.32 11.2 5.3 1.5 9.1 2.1 2.8 1 1 1 2 2 2 0 Proteins of 100 residues with WXG DUF812 PF05667.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.34 9.8 15.2 0.43 9.4 15.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF1664 PF07889.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.37 10.8 8.9 7.9 6.5 4.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Aconitase_C PF00694.19 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.37 11.1 4.3 0.18 12.1 1.8 1.6 1 1 1 2 2 2 0 Aconitase C-terminal domain bZIP_Maf PF03131.17 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.39 11.3 7.3 9 6.9 0.4 2.2 1 1 1 2 2 2 0 bZIP Maf transcription factor Seryl_tRNA_N PF02403.22 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.39 11.0 18.4 3.3 8.0 18.4 2.0 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain MHC2-interact PF09307.10 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.44 10.6 3.9 0.66 10.0 0.1 2.4 1 1 0 2 2 2 0 CLIP, MHC2 interacting DASH_Dam1 PF08653.10 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.52 10.1 8.9 2.1 8.2 0.2 2.9 1 1 2 3 3 3 0 DASH complex subunit Dam1 KxDL PF10241.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.52 10.6 10.4 0.5 10.7 5.0 2.7 1 1 2 3 3 3 0 Uncharacterized conserved protein DUF3450 PF11932.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.68 9.2 12.6 0.21 10.8 4.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) BST2 PF16716.5 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.7 10.5 15.0 6.6 7.4 0.6 2.5 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Laminin_II PF06009.12 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.78 9.8 13.3 26 4.8 13.3 2.2 1 1 0 1 1 1 0 Laminin Domain II Tweety PF04906.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.88 8.2 3.4 0.93 8.1 3.4 1.0 1 0 0 1 1 1 0 Tweety Swi5 PF07061.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.95 9.6 14.8 2.4 8.3 0.8 3.1 1 1 2 3 3 3 0 Swi5 Fib_alpha PF08702.10 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 0.97 9.6 10.4 1.9 8.7 10.4 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family H-kinase_dim PF02895.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1 9.8 5.9 0.5 10.8 0.7 2.4 1 1 2 3 3 3 0 Signal transducing histidine kinase, homodimeric domain DUF16 PF01519.16 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.2 9.7 13.3 0.23 11.9 4.1 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 EMP24_GP25L PF01105.24 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.2 9.1 11.3 7.1 6.5 0.4 2.1 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD GrpE PF01025.19 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.3 8.7 18.2 12 5.6 18.2 2.0 1 1 0 1 1 1 0 GrpE V_ATPase_I PF01496.19 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.3 6.8 8.5 1.6 6.5 8.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_CLD_2 PF14197.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 1.5 9.0 12.3 5.5e+02 0.8 12.2 2.3 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 AAA_23 PF13476.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.4 8.6 16.4 2.9 8.3 16.4 1.1 1 0 0 1 1 1 0 AAA domain USP8_interact PF08941.10 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.5 7.9 5.9 14 5.4 1.1 2.0 1 1 1 2 2 2 0 USP8 interacting DUF948 PF06103.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.7 8.3 10.6 0.69 10.2 2.5 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) BPL_N PF09825.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.7 7.0 6.8 3 6.8 6.8 1.0 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF4140 PF13600.6 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 2.9 8.4 10.7 2.5e+02 2.2 10.7 2.6 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) TMF_DNA_bd PF12329.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 3.9 7.5 23.4 0.11 12.5 6.1 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Fzo_mitofusin PF04799.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 4.2 6.9 9.6 6.4 6.3 4.9 2.0 1 1 1 2 2 2 0 fzo-like conserved region DUF334 PF03904.13 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.2 6.3 11.5 8.2 5.9 11.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) PCRF PF03462.18 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.5 6.6 10.3 8.2 6.2 10.3 1.2 1 0 0 1 1 1 0 PCRF domain Spc24 PF08286.11 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.6 7.0 16.4 1.9 8.7 4.9 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF724 PF05266.14 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.6 6.5 12.8 10 5.9 12.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DUF2203 PF09969.9 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 6.8 7.4 7.9 94 3.8 8.0 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Tho2 PF11262.8 NODE_52983_length_335_cov_27.113333_g45058_i0reverse_frame_2 - 7.2 5.7 12.6 0.16 11.1 3.1 1.9 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 bZIP_2 PF07716.15 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 0.0046 17.0 3.5 0.0046 17.0 3.5 2.7 2 2 1 3 3 3 1 Basic region leucine zipper MIS13 PF08202.11 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 0.01 15.1 8.6 0.012 15.0 8.6 1.0 1 0 0 1 1 1 0 Mis12-Mtw1 protein family ZapB PF06005.12 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 0.031 14.7 8.7 0.055 13.9 8.7 1.4 1 0 0 1 1 1 0 Cell division protein ZapB SlyX PF04102.12 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 0.13 12.9 5.1 0.27 11.9 4.8 1.7 1 1 0 1 1 1 0 SlyX DivIC PF04977.15 NODE_52981_length_335_cov_37.820000_g45056_i0reverse_frame_3 - 1.6 8.5 11.5 0.23 11.2 4.7 2.3 2 1 0 2 2 2 0 Septum formation initiator Chitin_synth_1 PF01644.17 NODE_52973_length_335_cov_58.150000_g45048_i0reverse_frame_2 - 0.016 15.2 0.3 0.02 14.9 0.3 1.4 1 1 0 1 1 1 0 Chitin synthase DUF1899 PF08953.11 NODE_52970_length_335_cov_66.046667_g45045_i0forward_frame_2 - 0.14 12.0 0.7 0.26 11.2 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1899) Collagen PF01391.18 NODE_52969_length_335_cov_67.046667_g45044_i0forward_frame_2 - 2.9e-05 23.8 12.4 4.1e-05 23.3 12.4 1.2 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) Rep_4 PF05797.11 NODE_52966_length_335_cov_73.116667_g45041_i0forward_frame_3 - 0.075 12.2 0.3 0.086 12.0 0.3 1.1 1 0 0 1 1 1 0 Yeast trans-acting factor (REP1/REP2) PABP PF00658.18 NODE_52963_length_335_cov_79.523333_g45038_i0reverse_frame_2 - 2.5e-06 27.6 0.7 4.6e-06 26.7 0.7 1.4 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain DUF3678 PF12435.8 NODE_52961_length_335_cov_79.706667_g45036_i0reverse_frame_3 - 0.38 10.2 2.4 0.74 9.2 2.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) DUF5542 PF17696.1 NODE_52961_length_335_cov_79.706667_g45036_i0forward_frame_3 - 0.07 13.3 0.0 0.07 13.3 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5542) Squash PF00299.18 NODE_52958_length_335_cov_102.190000_g45033_i0forward_frame_2 - 1.1 9.3 4.3 7.9 6.6 0.3 2.5 2 0 0 2 2 2 0 Squash family serine protease inhibitor # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks238.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks238.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks238.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks238.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:06 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FlxA PF14282.6 NODE_52954_length_335_cov_108.356667_g45029_i0forward_frame_3 - 0.067 13.2 0.1 0.086 12.8 0.1 1.1 1 0 0 1 1 1 0 FlxA-like protein EphA2_TM PF14575.6 NODE_52953_length_335_cov_114.623333_g45028_i0reverse_frame_2 - 0.0014 19.5 0.2 0.86 10.5 0.0 2.2 2 0 0 2 2 2 2 Ephrin type-A receptor 2 transmembrane domain CD34_antigen PF06365.12 NODE_52953_length_335_cov_114.623333_g45028_i0reverse_frame_2 - 0.045 13.3 0.9 0.054 13.1 0.1 1.5 2 0 0 2 2 2 0 CD34/Podocalyxin family Antiterm PF03589.13 NODE_52951_length_335_cov_121.910000_g45026_i0reverse_frame_2 - 0.015 15.6 0.0 0.019 15.3 0.0 1.3 1 0 0 1 1 1 0 Antitermination protein DPM3 PF08285.11 NODE_52949_length_335_cov_124.033333_g45024_i0reverse_frame_3 - 3.7 7.8 10.1 9.8 6.5 10.1 1.8 1 1 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Ac76 PF05814.11 NODE_52949_length_335_cov_124.033333_g45024_i0forward_frame_3 - 1.6 8.8 7.2 1.8 8.7 0.7 2.1 2 0 0 2 2 2 0 Orf76 (Ac76) PWWP PF00855.17 NODE_52949_length_335_cov_124.033333_g45024_i0forward_frame_2 - 6.8 7.2 9.0 0.32 11.4 1.1 2.0 1 1 0 2 2 2 0 PWWP domain ETRAMP PF09716.10 NODE_52949_length_335_cov_124.033333_g45024_i0forward_frame_2 - 7.1 6.8 12.6 1.2 9.3 3.2 2.2 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) zf-C3HC4_3 PF13920.6 NODE_52948_length_335_cov_135.253333_g45023_i0reverse_frame_3 - 1.4e-13 50.4 9.6 1.4e-13 50.4 9.6 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_52948_length_335_cov_135.253333_g45023_i0reverse_frame_3 - 0.0015 18.3 9.4 0.0034 17.2 9.4 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 NODE_52948_length_335_cov_135.253333_g45023_i0reverse_frame_3 - 0.053 13.5 13.8 0.067 13.2 12.2 2.0 1 1 0 1 1 1 0 zinc-RING finger domain Gp58 PF07902.11 NODE_52948_length_335_cov_135.253333_g45023_i0reverse_frame_3 - 0.12 10.6 0.0 0.12 10.6 0.0 1.0 1 0 0 1 1 1 0 gp58-like protein GP41 PF00517.17 NODE_52948_length_335_cov_135.253333_g45023_i0forward_frame_3 - 0.17 11.8 0.2 0.19 11.6 0.2 1.1 1 0 0 1 1 1 0 Retroviral envelope protein OTT_1508_deam PF14441.6 NODE_52945_length_335_cov_145.723333_g45020_i0forward_frame_3 - 0.029 14.4 0.4 0.044 13.8 0.4 1.4 1 0 0 1 1 1 0 OTT_1508-like deaminase DUF3405 PF11885.8 NODE_52942_length_335_cov_167.093333_g45017_i0forward_frame_2 - 0.015 14.0 0.6 0.018 13.7 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) DUF2478 PF10649.9 NODE_52939_length_335_cov_188.666667_g45014_i0forward_frame_2 - 0.043 13.4 0.3 0.062 12.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2478) MotB_plug PF13677.6 NODE_52935_length_335_cov_294.490000_g45010_i0reverse_frame_3 - 0.09 12.4 1.4 0.32 10.6 0.0 2.1 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB MORN PF02493.20 NODE_52929_length_335_cov_1156.513333_g45004_i0forward_frame_3 - 3.8e-18 64.2 18.6 2.6e-07 30.1 1.7 3.5 4 0 0 4 4 4 3 MORN repeat Ribosomal_S3_C PF00189.20 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_3 - 0.0024 18.3 1.9 3.7 8.1 0.1 3.0 1 1 2 3 3 3 3 Ribosomal protein S3, C-terminal domain PRD1_DD PF11087.8 NODE_52928_length_335_cov_1214.710000_g45003_i0reverse_frame_2 - 0.15 11.8 1.9 28 4.5 0.2 4.0 4 1 1 5 5 5 0 PRD1 phage membrane DNA delivery DUF4880 PF16220.5 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_3 - 0.027 14.4 11.4 9.5 6.2 0.1 4.8 5 0 0 5 5 5 0 Domain of unknown function (DUF4880) HU-CCDC81_bac_1 PF18174.1 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_3 - 0.056 13.3 0.2 37 4.3 0.0 3.8 2 1 2 4 4 4 0 CCDC81-like prokaryotic HU domain 1 RNA_POL_M_15KD PF02150.16 NODE_52928_length_335_cov_1214.710000_g45003_i0forward_frame_2 - 3.3 7.7 10.2 62 3.6 0.0 4.6 5 0 0 5 5 5 0 RNA polymerases M/15 Kd subunit zf-C4_Topoisom PF01396.19 NODE_52921_length_336_cov_1.265781_g44996_i0forward_frame_3 - 0.00029 20.5 4.8 0.012 15.3 0.7 3.3 3 1 0 3 3 3 2 Topoisomerase DNA binding C4 zinc finger Ank_2 PF12796.7 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 3.6e-07 30.7 0.0 5.4e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 6.5e-06 26.4 0.1 0.0028 18.0 0.0 2.9 3 0 0 3 3 3 1 Ankyrin repeat Ank_3 PF13606.6 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 4.2e-05 23.6 0.0 0.03 14.8 0.0 2.6 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 7.5e-05 23.2 0.0 0.0028 18.2 0.0 2.3 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_52920_length_336_cov_1.322259_g44995_i0forward_frame_3 - 0.0066 16.7 0.0 0.02 15.2 0.0 1.8 1 1 0 1 1 1 1 Ankyrin repeats (many copies) BCLP PF12304.8 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_3 - 0.083 12.4 4.3 0.096 12.2 4.3 1.0 1 0 0 1 1 1 0 Beta-casein like protein bZIP_1 PF00170.21 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_2 - 0.012 15.7 1.2 0.012 15.7 1.2 2.1 1 1 1 2 2 2 0 bZIP transcription factor CEP63 PF17045.5 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_2 - 0.013 15.5 5.0 0.014 15.3 5.0 1.1 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa DUF4760 PF15956.5 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_2 - 0.056 13.6 3.7 0.089 12.9 3.7 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4760) SLAM PF06214.11 NODE_52919_length_336_cov_1.365449_g44994_i0reverse_frame_2 - 0.16 12.0 3.2 0.22 11.5 3.2 1.2 1 0 0 1 1 1 0 Signaling lymphocytic activation molecule (SLAM) protein DUF2368 PF10166.9 NODE_52919_length_336_cov_1.365449_g44994_i0forward_frame_3 - 0.18 11.4 0.1 0.27 10.8 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2368) DUF3145 PF11343.8 NODE_52915_length_336_cov_1.617940_g44990_i0reverse_frame_2 - 0.044 13.3 0.2 0.052 13.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3145) DUF2105 PF09878.9 NODE_52912_length_336_cov_1.813953_g44987_i0forward_frame_2 - 0.055 13.2 0.4 0.055 13.2 0.4 1.4 2 0 0 2 2 2 0 Predicted membrane protein (DUF2105) zf-C2H2_3rep PF18868.1 NODE_52909_length_336_cov_2.046512_g44984_i0reverse_frame_3 - 0.033 14.8 0.1 0.043 14.5 0.1 1.3 1 0 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats Mtc PF03820.17 NODE_52906_length_336_cov_2.285714_g44981_i0forward_frame_3 - 1.2e-30 106.7 0.4 1.2e-30 106.6 0.4 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier 2TM PF13239.6 NODE_52906_length_336_cov_2.285714_g44981_i0forward_frame_3 - 0.039 14.3 0.2 0.059 13.7 0.2 1.3 1 0 0 1 1 1 0 2TM domain Rep_1B PF17873.1 NODE_52903_length_336_cov_2.431894_g44978_i0forward_frame_2 - 0.039 13.8 0.1 0.07 13.0 0.1 1.4 1 0 0 1 1 1 0 Replicase polyprotein 1ab Toxin_19 PF08088.12 NODE_52901_length_336_cov_2.441860_g44976_i0reverse_frame_3 - 0.048 13.8 7.5 0.048 13.8 7.5 2.1 2 0 0 2 2 2 0 Conotoxin I-superfamily FeS PF04060.13 NODE_52895_length_336_cov_2.641196_g44970_i0forward_frame_3 - 4.8e-13 48.5 6.3 8e-13 47.8 6.3 1.4 1 0 0 1 1 1 1 Putative Fe-S cluster Cwf_Cwc_15 PF04889.12 NODE_52893_length_336_cov_2.883721_g44968_i0forward_frame_2 - 0.77 9.4 16.8 0.98 9.1 16.8 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Presenilin PF01080.17 NODE_52893_length_336_cov_2.883721_g44968_i0forward_frame_2 - 4.7 5.9 5.3 5.1 5.7 5.3 1.0 1 0 0 1 1 1 0 Presenilin SDA1 PF05285.12 NODE_52893_length_336_cov_2.883721_g44968_i0forward_frame_2 - 8.3 5.7 21.8 11 5.3 21.8 1.2 1 0 0 1 1 1 0 SDA1 WRNPLPNID PF15017.6 NODE_52893_length_336_cov_2.883721_g44968_i0forward_frame_2 - 9.6 7.2 21.7 3.9 8.4 6.5 2.2 2 0 0 2 2 2 0 Putative WW-binding domain and destruction box AFT PF08731.11 NODE_52877_length_336_cov_62.481728_g44952_i0reverse_frame_3 - 0.13 12.6 0.1 0.14 12.5 0.1 1.2 1 0 0 1 1 1 0 Transcription factor AFT Metallothio_11 PF02066.15 NODE_52876_length_336_cov_63.299003_g44951_i0forward_frame_3 - 0.0079 16.4 3.3 0.1 12.8 0.6 2.2 2 0 0 2 2 2 2 Metallothionein family 11 Antimicrobial_5 PF08026.11 NODE_52876_length_336_cov_63.299003_g44951_i0forward_frame_3 - 0.79 9.8 4.2 0.37 10.9 1.3 2.0 2 0 0 2 2 2 0 Bee antimicrobial peptide SBE2 PF17076.5 NODE_52874_length_336_cov_67.611296_g44949_i0reverse_frame_3 - 0.066 11.4 0.9 0.073 11.3 0.9 1.0 1 0 0 1 1 1 0 SBE2, cell-wall formation PBECR5 PF18814.1 NODE_52874_length_336_cov_67.611296_g44949_i0forward_frame_3 - 0.029 14.3 0.5 0.031 14.2 0.5 1.1 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5 Glyco_hydro_38N PF01074.22 NODE_52872_length_336_cov_68.764120_g44947_i0reverse_frame_3 - 2.2e-13 50.2 0.1 2.3e-13 50.2 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Glyco_hydro_38N PF01074.22 NODE_52872_length_336_cov_68.764120_g44947_i0reverse_frame_2 - 1.5e-11 44.2 0.1 1.8e-11 43.9 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain DUF2733 PF10813.8 NODE_52871_length_336_cov_68.777409_g44946_i0reverse_frame_3 - 0.049 13.4 0.2 0.16 11.8 0.2 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) IncF PF17626.2 NODE_52871_length_336_cov_68.777409_g44946_i0forward_frame_2 - 0.061 13.7 0.6 0.079 13.3 0.6 1.1 1 0 0 1 1 1 0 Inclusion membrane protein F 7tm_6 PF02949.20 NODE_52871_length_336_cov_68.777409_g44946_i0forward_frame_2 - 0.094 11.8 0.8 0.11 11.5 0.8 1.1 1 0 0 1 1 1 0 7tm Odorant receptor Glyco_hydro_61 PF03443.14 NODE_52867_length_336_cov_73.172757_g44942_i0forward_frame_3 - 0.016 15.2 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 61 zf-CHY PF05495.12 NODE_52864_length_336_cov_78.770764_g44939_i0reverse_frame_2 - 0.24 11.9 5.6 0.079 13.5 3.3 1.5 2 0 0 2 2 2 0 CHY zinc finger EF-hand_1 PF00036.32 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 4.8e-12 44.5 0.3 8.2e-06 25.0 0.6 2.3 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 1.2e-10 40.4 0.9 9.4e-06 24.9 0.7 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 4.1e-09 35.7 0.5 6.4e-05 22.6 0.6 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 4.8e-09 36.6 1.7 8.1e-09 35.8 1.7 1.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 5.7e-06 26.1 0.3 3.6e-05 23.5 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 0.022 15.1 0.1 0.033 14.5 0.1 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region VbhA PF18495.1 NODE_52859_length_336_cov_91.315615_g44934_i0reverse_frame_2 - 0.49 10.3 2.0 30 4.6 0.0 3.4 2 1 2 4 4 4 0 Antitoxin VbhA zf-RVT PF13966.6 NODE_52859_length_336_cov_91.315615_g44934_i0forward_frame_3 - 0.19 12.5 0.0 0.27 12.0 0.0 1.2 1 0 0 1 1 1 0 zinc-binding in reverse transcriptase DUF4726 PF15855.5 NODE_52852_length_336_cov_116.401993_g44927_i0forward_frame_2 - 0.022 15.0 0.2 0.033 14.4 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) Bromo_MP PF01573.16 NODE_52849_length_336_cov_125.837209_g44924_i0forward_frame_2 - 0.026 13.9 0.0 0.03 13.7 0.0 1.3 1 0 0 1 1 1 0 Bromovirus movement protein PDE8 PF08629.10 NODE_52844_length_336_cov_197.305648_g44919_i0reverse_frame_3 - 0.088 12.8 2.3 2.2 8.3 0.3 2.3 2 0 0 2 2 2 0 PDE8 phosphodiesterase DUF4431 PF14485.6 NODE_52844_length_336_cov_197.305648_g44919_i0reverse_frame_2 - 0.065 13.0 0.1 14 5.6 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) DUF3667 PF12412.8 NODE_52844_length_336_cov_197.305648_g44919_i0reverse_frame_2 - 0.16 11.5 0.0 20 4.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3667) DUF2065 PF09838.9 NODE_52844_length_336_cov_197.305648_g44919_i0reverse_frame_2 - 0.31 11.1 3.4 11 6.2 0.2 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) DUF4129 PF13559.6 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_3 - 0.0054 17.0 0.0 3.2 8.1 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4129) MHC_I_3 PF16497.5 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_3 - 0.031 13.8 0.1 0.94 8.9 0.0 2.1 1 1 1 2 2 2 0 MHC-I family domain bPH_6 PF10756.9 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_2 - 0.00076 19.5 1.9 0.51 10.5 0.2 2.7 2 1 0 2 2 2 2 Bacterial PH domain Phage_holin_2_2 PF10746.9 NODE_52844_length_336_cov_197.305648_g44919_i0forward_frame_2 - 0.045 13.4 0.0 11 5.8 0.0 2.2 2 0 0 2 2 2 0 Phage holin T7 family, holin superfamily II DUF5558 PF17713.1 NODE_52841_length_336_cov_417.807309_g44916_i0reverse_frame_2 - 0.0015 18.9 2.6 0.0057 17.0 0.4 2.0 1 1 1 2 2 2 1 Family of unknown function (DUF5558) ADK_lid PF05191.14 NODE_52841_length_336_cov_417.807309_g44916_i0reverse_frame_2 - 0.014 15.4 0.4 2.8 8.0 0.2 2.6 2 1 0 2 2 2 0 Adenylate kinase, active site lid FSAP_sig_propep PF03032.15 NODE_52841_length_336_cov_417.807309_g44916_i0forward_frame_3 - 1.3 9.1 0.1 1.3 9.1 0.1 2.5 3 0 0 3 3 3 0 Frog skin active peptide family signal and propeptide Prolamin_like PF05617.11 ORF99380 - 1.8 8.8 13.3 10 6.4 10.1 3.0 1 1 1 2 2 2 0 Prolamin-like MORN PF02493.20 ORF98834 - 5.5e-17 60.6 9.9 8.8e-06 25.3 0.6 4.5 4 1 0 4 4 4 3 MORN repeat PATR PF12951.7 ORF98834 - 0.13 12.3 0.9 6.1 7.0 0.0 2.4 2 0 0 2 2 2 0 Passenger-associated-transport-repeat IRS PF02174.17 ORF98194 - 0.12 12.2 3.1 0.18 11.7 3.1 1.4 1 1 0 1 1 1 0 PTB domain (IRS-1 type) TMEM240 PF15207.6 ORF97444 - 9.9 5.8 8.5 3.2 7.4 1.7 2.5 1 1 1 2 2 2 0 TMEM240 family Rubella_Capsid PF05750.11 ORF97342 - 0.66 9.5 5.4 0.74 9.4 5.4 1.0 1 0 0 1 1 1 0 Rubella capsid protein PDEase_I PF00233.19 ORF95889 - 3.5e-05 23.6 0.0 4.2e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase PP2C PF00481.21 ORF95804 - 7.9e-15 55.2 0.0 8.7e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SWC7 PF17330.2 ORF95804 - 0.052 13.6 0.0 0.083 13.0 0.0 1.2 1 0 0 1 1 1 0 SWR1 chromatin-remodelling complex, sub-unit Swc7 Rotamase_3 PF13616.6 ORF95804 - 0.078 13.5 0.0 0.14 12.7 0.0 1.3 1 0 0 1 1 1 0 PPIC-type PPIASE domain ADK PF00406.22 ORF95743 - 0.17 12.0 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Adenylate kinase BMC PF00936.19 ORF95329 - 9.6e-28 96.0 5.2 1.2e-27 95.7 5.2 1.1 1 0 0 1 1 1 1 BMC domain Resistin PF06954.11 ORF9441 - 0.72 10.4 9.8 3.4 8.3 0.8 2.2 2 0 0 2 2 2 0 Resistin DUF4940 PF16298.5 ORF93074 - 0.079 12.6 0.0 0.087 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4940) DNA_pol_delta_4 PF04081.13 ORF9147 - 0.23 11.8 0.1 0.33 11.3 0.1 1.1 1 0 0 1 1 1 0 DNA polymerase delta, subunit 4 FRG2 PF15315.6 ORF89970 - 2.7 8.1 12.0 3.7 7.7 12.0 1.2 1 0 0 1 1 1 0 Facioscapulohumeral muscular dystrophy candidate 2 Defensin_2 PF01097.18 ORF89933 - 0.078 12.9 1.2 0.11 12.4 0.1 1.8 2 0 0 2 2 2 0 Arthropod defensin Phage_clamp_A PF16790.5 ORF89404 - 0.008 16.6 0.2 0.0089 16.5 0.2 1.0 1 0 0 1 1 1 1 Bacteriophage clamp loader A subunit SdiA-regulated PF06977.11 ORF88577 - 0.16 11.2 0.0 0.22 10.7 0.0 1.1 1 0 0 1 1 1 0 SdiA-regulated Xan_ur_permease PF00860.20 ORF88496 - 0.02 13.6 3.2 0.02 13.6 3.2 1.0 1 0 0 1 1 1 0 Permease family DUF4508 PF14969.6 ORF8844 - 0.028 14.7 0.3 0.039 14.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) Peroxidase_ext PF11895.8 ORF86574 - 0.14 12.1 0.2 0.21 11.5 0.2 1.4 1 0 0 1 1 1 0 Fungal peroxidase extension region MPS-4 PF17523.2 ORF86548 - 0.073 13.2 0.1 0.073 13.2 0.1 1.6 2 0 0 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Turandot PF07240.11 ORF85970 - 0.75 9.8 0.1 0.75 9.8 0.1 2.2 1 1 1 2 2 2 0 Stress-inducible humoral factor Turandot DUF533 PF04391.12 ORF85970 - 1 8.9 9.1 1.2 8.7 8.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF533) TFIIA PF03153.13 ORF85970 - 6.2 6.7 17.1 6.3 6.7 17.1 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit MGC-24 PF05283.11 ORF85154 - 1.1 9.7 8.6 1.4 9.4 8.6 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin CFC PF09443.10 ORF84422 - 0.25 11.2 3.2 1 9.2 0.3 2.4 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) Eisosome1 PF12757.7 ORF83912 - 0.04 14.2 0.0 0.042 14.1 0.0 1.2 1 0 0 1 1 1 0 Eisosome protein 1 SKA2 PF16740.5 ORF83653 - 0.068 13.0 0.5 0.087 12.6 0.1 1.4 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 CBP_BcsG PF11658.8 ORF82244 - 0.56 8.5 6.0 0.61 8.4 6.0 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG SHIPPO-rpt PF07004.12 ORF81625 - 6.6e-06 26.8 7.5 0.0047 17.8 1.6 2.6 2 1 0 2 2 2 2 Sperm-tail PG-rich repeat zf-C3HC4_3 PF13920.6 ORF81491 - 1.6 8.6 10.0 3.7 7.5 6.5 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Prefoldin_2 PF01920.20 ORF81404 - 2.5e-15 56.3 11.8 2.9e-15 56.1 11.8 1.0 1 0 0 1 1 1 1 Prefoldin subunit DUF1664 PF07889.12 ORF81404 - 0.023 14.8 1.1 0.023 14.8 1.1 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) CagD PF16567.5 ORF81404 - 0.079 12.7 2.4 0.093 12.5 2.4 1.0 1 0 0 1 1 1 0 Pathogenicity island component CagD Prefoldin PF02996.17 ORF81404 - 0.23 11.4 6.0 0.59 10.1 5.7 1.9 1 1 0 1 1 1 0 Prefoldin subunit DUF3645 PF12359.8 ORF80987 - 0.16 11.4 0.2 0.26 10.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3645) FWWh PF14922.6 ORF80478 - 0.03 14.3 0.1 0.044 13.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function SLATT_5 PF18160.1 ORF79174 - 0.04 13.3 0.0 0.048 13.0 0.0 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 SLATT_1 PF18181.1 ORF79174 - 0.077 12.9 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 Trp_oprn_chp PF09534.10 ORF79174 - 0.2 11.4 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) SDH_beta PF03315.15 ORF78699 - 0.022 15.1 1.0 0.032 14.6 0.9 1.3 1 1 0 1 1 1 0 Serine dehydratase beta chain DUF1258 PF06869.12 ORF78196 - 0.094 12.2 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) Gemini_mov PF01708.16 ORF77093 - 0.085 12.6 0.4 1.8 8.4 0.1 2.1 2 0 0 2 2 2 0 Geminivirus putative movement protein CDT1 PF08839.11 ORF76730 - 0.0023 18.2 0.5 0.0033 17.7 0.5 1.2 1 0 0 1 1 1 1 DNA replication factor CDT1 like DLIC PF05783.11 ORF75972 - 0.21 10.4 3.1 0.24 10.2 3.1 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) DUF4719 PF15843.5 ORF75972 - 0.37 10.9 5.2 0.43 10.7 5.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) WD40 PF00400.32 ORF74666 - 6.6e-06 26.8 0.1 0.057 14.3 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF74666 - 0.035 14.4 1.0 0.83 10.0 0.1 2.0 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Citrus_P18 PF05520.11 ORF74557 - 0.023 14.4 0.1 0.026 14.2 0.1 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P18 protein IL4 PF00727.18 ORF73501 - 0.12 12.6 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Interleukin 4 Microvir_J PF04726.13 ORF73034 - 0.011 15.6 2.4 0.018 15.0 2.4 1.3 1 0 0 1 1 1 0 Microvirus J protein HJURP_mid PF12346.8 ORF72932 - 0.016 15.6 0.5 0.03 14.8 0.5 1.5 1 1 0 1 1 1 0 Holliday junction recognition protein-associated repeat Fumarate_red_C PF02300.17 ORF72687 - 0.052 13.6 3.3 0.082 13.0 3.2 1.5 1 1 0 1 1 1 0 Fumarate reductase subunit C Glyco_hydro_59 PF02057.15 ORF71245 - 0.014 14.6 0.1 0.015 14.6 0.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 DUF5442 PF17514.2 ORF71245 - 0.064 13.5 0.1 3.1 8.0 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5442) Tsc35 PF15079.6 ORF70892 - 0.11 12.1 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Testis-specific protein 35 PqqA PF08042.11 ORF70687 - 0.1 12.7 0.2 0.21 11.7 0.2 1.4 1 0 0 1 1 1 0 PqqA family Oxidored_q2 PF00420.24 ORF70299 - 0.17 11.5 10.4 2.8 7.6 10.5 2.1 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DHHC PF01529.20 ORF70299 - 6 7.0 15.7 8.4 6.5 15.7 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase UPF0193 PF05250.11 ORF68886 - 2.1e-11 44.0 1.4 2.1e-11 44.0 1.4 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0193) ESP PF16590.5 ORF68672 - 0.022 15.0 0.1 0.025 14.8 0.1 1.2 1 0 0 1 1 1 0 Exocrine gland-secreting peptide YABBY PF04690.13 ORF68672 - 0.15 12.6 0.9 0.2 12.2 0.9 1.2 1 0 0 1 1 1 0 YABBY protein DUF4440 PF14534.6 ORF66810 - 0.00014 22.2 0.0 0.00017 21.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.6 ORF66810 - 0.02 15.2 0.0 0.023 14.9 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like domain SnoaL_2 PF12680.7 ORF66810 - 0.022 15.4 0.0 0.029 15.0 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like domain CaMKII_AD PF08332.10 ORF66810 - 0.094 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II association domain DUF2062 PF09835.9 ORF66732 - 0.0053 16.6 0.6 0.0066 16.3 0.6 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) CLN3 PF02487.17 ORF66500 - 5.5e-12 45.4 3.6 6.8e-12 45.1 3.6 1.0 1 0 0 1 1 1 1 CLN3 protein L6_membrane PF05805.12 ORF66500 - 0.043 13.4 1.4 0.052 13.1 1.4 1.1 1 0 0 1 1 1 0 L6 membrane protein Mago_nashi PF02792.14 ORF65471 - 2.6e-12 47.1 0.0 3.1e-12 46.8 0.0 1.0 1 0 0 1 1 1 1 Mago nashi protein Bac_DNA_binding PF00216.21 ORF6544 - 1.7e-12 47.4 2.0 2.5e-12 46.8 2.0 1.3 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF6544 - 0.094 12.7 0.5 0.15 12.1 0.5 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal Pro-NT_NN PF07421.11 ORF65041 - 0.064 13.5 4.2 0.084 13.1 4.2 1.2 1 0 0 1 1 1 0 Neurotensin/neuromedin N precursor MeaB PF03308.16 ORF65041 - 0.12 11.3 0.8 0.14 11.2 0.8 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ALMT PF11744.8 ORF65041 - 0.13 11.1 3.1 0.15 10.9 3.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF4230 PF14014.6 ORF65041 - 0.15 12.3 4.6 0.045 14.0 1.7 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4230) OATP PF03137.20 ORF65016 - 0.0048 15.2 1.5 0.0053 15.1 1.5 1.0 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family KIAA1328 PF15369.6 ORF64752 - 0.057 13.2 2.8 0.07 13.0 2.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein KIAA1328 BPD_transp_2 PF02653.16 ORF64405 - 0.0013 17.9 8.4 0.0016 17.7 8.4 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Tctex-1 PF03645.13 ORF6270 - 6.2e-24 84.2 0.2 7.2e-24 84.0 0.2 1.0 1 0 0 1 1 1 1 Tctex-1 family AvrRpt-cleavage PF05627.11 ORF6270 - 0.052 12.9 0.4 2.2 7.7 0.1 2.4 2 0 0 2 2 2 0 Cleavage site for pathogenic type III effector avirulence factor Avr DUF959 PF06121.14 ORF62167 - 0.099 12.9 0.0 0.11 12.8 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF959) CHZ PF09649.10 ORF60745 - 1.7 8.2 3.5 6.4 6.3 0.1 2.4 2 0 0 2 2 2 0 Histone chaperone domain CHZ ERGIC_N PF13850.6 ORF60287 - 0.026 14.9 0.3 0.031 14.6 0.3 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TRAM_LAG1_CLN8 PF03798.16 ORF59751 - 6.5e-06 26.0 5.4 7.3e-06 25.9 5.4 1.0 1 0 0 1 1 1 1 TLC domain DUF1648 PF07853.11 ORF59751 - 0.0088 15.7 0.3 0.018 14.7 0.3 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1648) SNARE PF05739.19 ORF59751 - 7.2 6.7 5.8 15 5.7 5.8 1.5 1 0 0 1 1 1 0 SNARE domain DUF4940 PF16298.5 ORF5953 - 0.079 12.6 0.0 0.087 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4940) Bac_DNA_binding PF00216.21 ORF58947 - 1.7e-12 47.4 2.0 2.5e-12 46.8 2.0 1.3 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF58947 - 0.094 12.7 0.5 0.15 12.1 0.5 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal Ank_5 PF13857.6 ORF57945 - 2.7e-09 37.1 0.0 5.5e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF57945 - 3.2e-08 34.0 0.0 0.00026 21.5 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF57945 - 1.8e-05 25.3 0.0 2.8e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF57945 - 1.8e-05 25.0 0.0 7.8e-05 23.0 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 ORF57945 - 5.2e-05 23.3 0.0 0.00019 21.6 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeat Bax1-I PF01027.20 ORF57891 - 2.6e-10 40.5 5.6 3e-10 40.3 5.6 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 B12D PF06522.11 ORF57658 - 2.5e-11 43.2 0.0 3.4e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 NADH-ubiquinone reductase complex 1 MLRQ subunit ORC4_C PF14629.6 ORF57079 - 0.0062 15.9 0.3 0.0076 15.6 0.3 1.0 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 4 C-terminus PI_PP_I PF18363.1 ORF57038 - 0.058 13.6 0.0 0.082 13.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoinositide phosphatase insertion domain DUF5083 PF16890.5 ORF56967 - 0.024 14.3 0.6 0.035 13.9 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5083) MSG PF02349.15 ORF55328 - 0.11 12.7 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Major surface glycoprotein FERM_M PF00373.18 ORF54905 - 0.88 10.0 5.7 4.1 7.8 5.7 1.9 1 1 0 1 1 1 0 FERM central domain Toxin_27 PF08099.11 ORF50866 - 0.025 14.7 0.1 0.046 13.8 0.1 1.5 1 0 0 1 1 1 0 Scorpion calcine family ABC_sub_bind PF04392.12 ORF49176 - 0.14 11.4 0.0 0.16 11.2 0.0 1.0 1 0 0 1 1 1 0 ABC transporter substrate binding protein DUF4937 PF16291.5 ORF49053 - 0.15 12.3 0.1 0.19 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4937 DUF3755 PF12579.8 ORF49039 - 0.033 13.8 0.1 0.05 13.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3755) UCR_hinge PF02320.16 ORF47555 - 4.9e-11 42.7 2.6 7.1e-11 42.2 2.6 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein SpoIIM PF01944.17 ORF47343 - 0.028 14.5 2.0 0.034 14.2 2.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein M DUF922 PF06037.11 ORF45545 - 0.074 12.8 0.6 0.095 12.5 0.6 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) HTH_37 PF13744.6 ORF45545 - 0.18 11.8 0.4 1.6 8.7 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain Ribosomal_L13e PF01294.18 ORF45545 - 0.36 10.7 2.2 0.3 10.9 1.1 1.4 2 0 0 2 2 2 0 Ribosomal protein L13e VIT1 PF01988.19 ORF44771 - 0.31 10.9 1.9 0.39 10.6 1.9 1.3 1 1 0 1 1 1 0 VIT family DUF5083 PF16890.5 ORF44518 - 0.024 14.3 0.6 0.035 13.9 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5083) zf-Mss51 PF13824.6 ORF43836 - 0.03 14.4 1.0 0.062 13.4 1.0 1.6 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 SRC-1 PF08832.10 ORF43836 - 0.13 13.3 0.2 0.18 12.9 0.2 1.1 1 0 0 1 1 1 0 Steroid receptor coactivator HTH_50 PF18024.1 ORF42564 - 0.14 11.8 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4149 PF13664.6 ORF42030 - 0.76 10.1 3.8 2.7 8.4 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4149) DUF2721 PF11026.8 ORF42030 - 2.6 7.9 11.8 3.3 7.6 11.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) K_channel_TID PF07941.11 ORF41773 - 0.0071 16.8 2.9 0.011 16.2 2.9 1.2 1 0 0 1 1 1 1 Potassium channel Kv1.4 tandem inactivation domain DUF4719 PF15843.5 ORF41773 - 0.058 13.5 1.9 0.077 13.1 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) Herpes_pp85 PF04637.12 ORF4075 - 9.5 4.5 7.1 11 4.3 7.1 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) EamA PF00892.20 ORF40670 - 7.2e-10 39.2 9.5 8.4e-10 39.0 9.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family Multi_Drug_Res PF00893.19 ORF40670 - 2.6e-08 34.4 5.2 3.4e-08 34.0 5.2 1.2 1 0 0 1 1 1 1 Small Multidrug Resistance protein TMEM234 PF10639.9 ORF40670 - 5.7e-05 23.1 0.3 0.00011 22.2 0.3 1.5 1 1 1 2 2 2 1 Putative transmembrane family 234 PalH PF08733.10 ORF40670 - 0.049 12.6 1.3 0.059 12.4 1.3 1.2 1 0 0 1 1 1 0 PalH/RIM21 DUF202 PF02656.15 ORF40670 - 0.053 14.0 9.1 0.23 11.9 0.5 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF202) DUF4131 PF13567.6 ORF40670 - 8.6 6.0 9.2 5.6 6.6 7.5 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) Alba PF01918.21 ORF3976 - 0.15 11.9 0.3 0.23 11.3 0.3 1.3 1 0 0 1 1 1 0 Alba Atx10homo_assoc PF09759.9 ORF39412 - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Spinocerebellar ataxia type 10 protein domain FGFR3_TM PF18123.1 ORF38971 - 5.7 6.5 10.5 0.75 9.4 0.4 3.0 3 0 0 3 3 3 0 Fibroblast growth factor receptor 3 transmembrane domain Myotub-related PF06602.14 ORF38863 - 0.13 11.2 0.0 0.14 11.1 0.0 1.0 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain Acyltransf_C PF16076.5 ORF37977 - 0.18 11.9 0.4 0.59 10.3 0.2 2.0 1 1 1 2 2 2 0 Acyltransferase C-terminus SpoIIM PF01944.17 ORF37846 - 0.028 14.5 2.0 0.034 14.2 2.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein M Dapper PF15268.6 ORF37597 - 0.11 11.3 1.4 0.12 11.2 1.4 1.0 1 0 0 1 1 1 0 Dapper Trns_repr_metal PF02583.17 ORF37554 - 1e-21 77.0 1.6 1.5e-21 76.6 1.6 1.2 1 0 0 1 1 1 1 Metal-sensitive transcriptional repressor V-SNARE PF05008.15 ORF37554 - 0.021 15.2 0.1 0.06 13.7 0.0 1.8 3 0 0 3 3 3 0 Vesicle transport v-SNARE protein N-terminus Img2 PF05046.14 ORF37554 - 0.032 14.5 0.1 0.043 14.1 0.1 1.4 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) PglL_A PF15864.5 ORF37495 - 0.11 12.3 0.3 0.11 12.3 0.3 1.7 2 0 0 2 2 2 0 Protein glycosylation ligase DUF1658 PF07871.11 ORF36839 - 0.041 13.8 0.1 0.11 12.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1658) Ras PF00071.22 ORF36565 - 5.3e-06 26.1 0.0 7.7e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 Ras family Bac_DNA_binding PF00216.21 ORF36540 - 3.7e-11 43.1 1.8 4.8e-11 42.7 1.8 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein HisKA_2 PF07568.12 ORF3633 - 0.0056 16.8 2.0 0.0066 16.5 0.3 1.8 1 1 1 2 2 2 1 Histidine kinase FWWh PF14922.6 ORF35361 - 0.021 14.7 0.3 0.026 14.5 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function Peptidase_S66C PF17676.1 ORF34657 - 0.19 12.3 0.0 0.23 12.0 0.0 1.2 1 0 0 1 1 1 0 LD-carboxypeptidase C-terminal domain PspA_IM30 PF04012.12 ORF34411 - 9.3e-06 25.4 12.0 1.8e-05 24.5 12.0 1.5 1 1 0 1 1 1 1 PspA/IM30 family SAM_KSR1 PF13543.6 ORF34411 - 0.023 14.9 0.1 0.033 14.3 0.1 1.3 1 0 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 PhoU PF01895.19 ORF34411 - 0.029 14.8 1.8 0.055 13.9 1.7 1.6 1 1 0 1 1 1 0 PhoU domain Lzipper-MIP1 PF14389.6 ORF34411 - 0.049 13.9 2.5 0.081 13.2 2.3 1.7 1 1 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 TPR_4 PF07721.14 ORF34411 - 0.16 12.7 0.9 0.16 12.7 0.9 2.9 3 1 0 3 3 3 0 Tetratricopeptide repeat GrpE PF01025.19 ORF34411 - 0.2 11.3 3.6 0.22 11.2 3.6 1.2 1 0 0 1 1 1 0 GrpE FlgN PF05130.12 ORF34411 - 0.82 10.2 7.0 2 8.9 6.9 1.7 1 1 0 1 1 1 0 FlgN protein FCD PF07729.12 ORF34411 - 0.98 9.9 12.0 6.2 7.3 0.2 2.1 2 0 0 2 2 2 0 FCD domain DUF1570 PF07607.11 ORF34121 - 0.14 12.5 0.0 0.4 11.0 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1570) HTH_50 PF18024.1 ORF33980 - 0.14 11.8 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Foie-gras_1 PF11817.8 ORF33929 - 0.0011 18.7 0.1 0.0015 18.2 0.1 1.2 1 0 0 1 1 1 1 Foie gras liver health family 1 Clavanin PF05452.11 ORF33757 - 0.074 13.3 0.4 0.47 10.7 0.0 1.9 2 0 0 2 2 2 0 Clavanin Phage_CRI PF05144.14 ORF33757 - 0.077 12.3 1.1 0.081 12.2 1.1 1.1 1 0 0 1 1 1 0 Phage replication protein CRI AID PF18767.1 ORF33340 - 0.015 15.3 0.3 0.021 14.8 0.3 1.3 1 0 0 1 1 1 0 Activation induced deaminase Ntox35 PF15534.6 ORF33340 - 0.068 13.6 0.0 0.11 13.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial toxin 35 Mito_carr PF00153.27 ORF31891 - 1.6e-08 34.3 0.0 2e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF4787 PF16029.5 ORF31011 - 6.7e-06 26.1 8.0 8.9e-06 25.7 8.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4787) Mo25 PF08569.11 ORF29347 - 4e-17 62.6 5.7 4.8e-17 62.3 5.7 1.0 1 0 0 1 1 1 1 Mo25-like AzlD PF05437.12 ORF28386 - 2.8e-14 53.1 5.9 3.3e-14 52.9 5.9 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) DUF4479 PF14794.6 ORF27412 - 0.25 11.2 0.3 2.2 8.2 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4479) Opy2 PF09463.10 ORF26821 - 0.011 16.0 1.1 0.011 16.0 1.1 1.9 2 0 0 2 2 2 0 Opy2 protein zf-C2H2 PF00096.26 ORF2326 - 2.4e-11 43.4 15.4 8.3e-06 26.0 2.6 2.8 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF2326 - 3.7e-09 36.6 13.7 0.0001 22.8 1.7 2.8 3 0 0 3 3 2 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF2326 - 2.3e-05 24.1 3.7 0.092 12.5 0.1 2.4 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-BED PF02892.15 ORF2326 - 6.4e-05 22.9 12.0 0.0005 20.0 5.5 2.4 1 1 1 2 2 2 2 BED zinc finger zf-H2C2_2 PF13465.6 ORF2326 - 0.0002 21.6 18.4 0.0042 17.5 0.3 3.7 3 1 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF2326 - 0.0012 18.6 16.6 0.29 10.9 1.2 3.4 2 1 0 2 2 2 2 C2H2-type zinc-finger domain zf-Di19 PF05605.12 ORF2326 - 0.003 17.8 1.3 0.022 15.1 1.2 2.1 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_2 PF12756.7 ORF2326 - 0.0048 17.2 8.3 0.12 12.7 0.3 2.4 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 ORF2326 - 0.0052 17.0 7.3 0.34 11.2 0.6 2.8 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF2326 - 0.0053 17.1 5.4 0.19 12.2 0.7 2.8 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2HE PF16278.5 ORF2326 - 0.013 15.9 1.5 0.013 15.9 1.5 2.2 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-MYST PF17772.1 ORF2326 - 0.015 14.8 1.9 0.11 12.2 0.3 2.3 2 0 0 2 2 2 0 MYST family zinc finger domain zf-C2H2_3rep PF18868.1 ORF2326 - 0.036 14.7 4.7 0.084 13.6 4.7 1.7 1 1 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats FYVE PF01363.21 ORF2326 - 0.059 13.5 7.8 1.5 9.0 7.8 2.3 1 1 0 1 1 1 0 FYVE zinc finger zf-C2H2_6 PF13912.6 ORF2326 - 0.15 12.1 12.6 1.5 8.9 2.5 2.6 2 0 0 2 2 2 0 C2H2-type zinc finger Actin_micro PF17003.5 ORF2326 - 0.52 9.4 5.5 0.97 8.6 0.3 2.0 1 1 1 2 2 2 0 Putative actin-like family DUF4508 PF14969.6 ORF23207 - 0.028 14.7 0.3 0.039 14.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) DUF1639 PF07797.14 ORF22593 - 0.15 12.1 0.1 0.26 11.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) Prefoldin_2 PF01920.20 ORF22374 - 9.2e-12 44.9 1.2 1.1e-11 44.7 1.2 1.1 1 0 0 1 1 1 1 Prefoldin subunit Rx_N PF18052.1 ORF22374 - 0.012 15.8 0.5 0.043 14.1 0.2 1.8 2 0 0 2 2 2 0 Rx N-terminal domain S-AdoMet_synt_C PF02773.16 ORF2235 - 0.053 13.5 0.0 0.059 13.4 0.0 1.1 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain WRW PF10206.9 ORF2195 - 0.035 14.5 0.6 0.045 14.1 0.6 1.2 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f NigD_C PF17415.2 ORF21764 - 0.029 14.4 0.1 0.034 14.2 0.1 1.2 1 0 0 1 1 1 0 NigD-like C-terminal beta sandwich domain CAP-ZIP_m PF15255.6 ORF21190 - 0.085 13.1 0.2 0.12 12.7 0.2 1.3 1 0 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region PglL_A PF15864.5 ORF21130 - 0.11 12.3 0.3 0.11 12.3 0.3 1.7 2 0 0 2 2 2 0 Protein glycosylation ligase DUF2312 PF10073.9 ORF21082 - 0.087 12.5 0.2 0.75 9.5 0.5 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Adeno_E1B_55K_N PF04623.12 ORF20908 - 0.21 12.3 1.6 0.38 11.5 0.5 1.8 2 0 0 2 2 2 0 Adenovirus E1B protein N-terminus Microvir_J PF04726.13 ORF20018 - 0.011 15.6 2.4 0.018 15.0 2.4 1.3 1 0 0 1 1 1 0 Microvirus J protein MSA-2c PF12238.8 ORF19134 - 5.4 7.0 4.4 7.4 6.5 4.4 1.3 1 0 0 1 1 1 0 Merozoite surface antigen 2c Metallothio_5 PF02067.15 ORF1897 - 3.5 7.8 17.0 0.23 11.6 11.2 2.0 2 0 0 2 2 2 0 Metallothionein family 5 TNFR_16_TM PF18422.1 ORF18915 - 0.052 13.5 0.9 0.11 12.4 0.9 1.5 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain 12TM_1 PF09847.9 ORF1882 - 0.0071 15.5 10.2 0.0081 15.3 10.2 1.0 1 0 0 1 1 1 1 Membrane protein of 12 TMs Prefoldin PF02996.17 ORF18530 - 2.5e-22 79.0 2.8 2.9e-22 78.8 2.8 1.0 1 0 0 1 1 1 1 Prefoldin subunit KxDL PF10241.9 ORF18530 - 0.013 15.7 0.2 0.019 15.2 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein Prefoldin_2 PF01920.20 ORF18530 - 0.048 13.6 0.3 0.048 13.6 0.3 1.8 2 0 0 2 2 2 0 Prefoldin subunit Fim-adh_lectin PF09222.10 ORF18263 - 0.079 12.5 0.0 0.096 12.2 0.0 1.2 1 0 0 1 1 1 0 Fimbrial adhesin F17-AG, lectin domain Methyltransf_29 PF03141.16 ORF16653 - 0.013 14.1 0.3 0.013 14.0 0.3 1.0 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Peptidase_S30 PF01577.16 ORF16543 - 0.061 12.9 12.4 0.072 12.7 12.4 1.0 1 0 0 1 1 1 0 Potyvirus P1 protease DUF812 PF05667.11 ORF16543 - 0.071 12.0 15.5 0.082 11.8 15.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) FapA PF03961.13 ORF16543 - 0.33 9.5 15.3 0.36 9.4 15.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A OmpH PF03938.14 ORF16543 - 0.38 11.1 16.2 0.49 10.7 16.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Presenilin PF01080.17 ORF16543 - 1.2 7.8 6.8 1.1 7.9 6.8 1.0 1 0 0 1 1 1 0 Presenilin DUF853 PF05872.12 ORF16543 - 1.6 7.3 7.1 1.9 7.0 7.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) Atrophin-1 PF03154.15 ORF16543 - 4.3 5.5 9.7 4.3 5.5 9.7 1.1 1 0 0 1 1 1 0 Atrophin-1 family Ndc1_Nup PF09531.10 ORF16543 - 5.1 5.6 4.5 6.5 5.3 4.5 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Neur_chan_memb PF02932.16 ORF16543 - 8 6.5 6.3 8.6 6.3 6.3 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Tho2 PF11262.8 ORF16543 - 9.9 5.3 11.8 12 5.0 11.8 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Sh_2 PF17512.2 ORF16391 - 0.42 10.4 3.5 0.54 10.0 3.5 1.3 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein UspB PF10625.9 ORF152506 - 1.3e-54 182.7 1.3 1.6e-54 182.4 1.3 1.0 1 0 0 1 1 1 1 Universal stress protein B (UspB) Carb_anhydrase PF00194.21 ORF152328 - 4.3e-16 59.2 0.0 4.3e-16 59.2 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DUF4508 PF14969.6 ORF151978 - 0.028 14.7 0.3 0.039 14.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) Carb_anhydrase PF00194.21 ORF150661 - 3.6e-16 59.5 0.0 3.6e-16 59.5 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase PBP1_TM PF14812.6 ORF148319 - 0.21 12.0 3.9 0.34 11.3 3.9 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal LAT PF15234.6 ORF148319 - 3.8 7.2 13.8 4.3 7.0 13.8 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells Oxidored_q2 PF00420.24 ORF147871 - 0.17 11.5 10.4 2.8 7.6 10.5 2.1 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DHHC PF01529.20 ORF147871 - 6 7.0 15.7 8.4 6.5 15.7 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase MORN PF02493.20 ORF147644 - 1.1e-15 56.4 11.0 8.1e-06 25.4 2.1 3.9 4 0 0 4 4 4 3 MORN repeat NPCC PF08058.11 ORF147578 - 1.2 9.2 4.7 1.5 8.9 4.7 1.2 1 0 0 1 1 1 0 Nuclear pore complex component TonB_dep_Rec PF00593.24 ORF147189 - 2e-12 47.7 4.0 2.2e-12 47.6 4.0 1.0 1 0 0 1 1 1 1 TonB dependent receptor G-alpha PF00503.20 ORF146812 - 0.17 11.0 0.1 0.18 10.9 0.1 1.1 1 0 0 1 1 1 0 G-protein alpha subunit PPP1R35_C PF15503.6 ORF146636 - 0.15 11.8 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 35 C-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks239.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks239.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks239.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks239.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:11:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Acyl_transf_3 PF01757.22 ORF146973 - 6.9e-16 58.2 39.0 9e-16 57.8 39.0 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF418 PF04235.12 ORF146973 - 0.006 16.5 1.9 0.006 16.5 1.9 2.4 3 0 0 3 3 3 1 Protein of unknown function (DUF418) zf-ZPR1 PF03367.13 ORF134895 - 4.3e-100 332.2 0.3 4e-49 166.5 0.1 2.3 2 0 0 2 2 2 2 ZPR1 zinc-finger domain Lar_restr_allev PF14354.6 ORF134895 - 0.35 11.3 7.7 7.2 7.1 0.2 3.5 2 1 1 3 3 3 0 Restriction alleviation protein Lar CcdA PF07362.12 ORF117459 - 1.2 9.6 3.1 10 6.7 0.1 3.7 5 0 0 5 5 5 0 Post-segregation antitoxin CcdA LRR_6 PF13516.6 ORF117459 - 1.8 8.8 8.2 4.3 7.6 0.4 4.6 5 0 0 5 5 5 0 Leucine Rich repeat ING PF12998.7 ORF100328 - 3.2 8.4 7.7 8.8 7.0 0.3 3.6 3 2 1 5 5 5 0 Inhibitor of growth proteins N-terminal histone-binding RhoGAP PF00620.27 ORF100328 - 6.1 6.6 7.4 2.9 7.7 0.9 2.7 3 0 0 3 3 3 0 RhoGAP domain tRNA-synt_1g PF09334.11 ORF97831 - 7.6e-77 258.7 0.0 1.9e-53 181.6 0.0 2.3 2 1 1 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 ORF97831 - 4.6e-24 84.6 0.0 2.6e-21 75.5 0.1 2.2 1 1 1 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 ORF97831 - 2e-07 30.7 0.0 3.5e-06 26.6 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 ORF97831 - 3.7e-07 30.2 0.1 7.3e-07 29.3 0.1 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 ORF97831 - 0.0011 18.0 0.0 0.0017 17.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1b PF00579.25 ORF97831 - 0.17 11.2 0.0 0.28 10.5 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) FHA PF00498.26 ORF88459 - 2.6e-10 40.5 0.7 9.2e-10 38.7 0.2 2.3 3 0 0 3 3 3 1 FHA domain RINGv PF12906.7 ORF88459 - 7.8e-09 35.5 8.6 1.6e-08 34.5 8.6 1.6 1 0 0 1 1 1 1 RING-variant domain Yop-YscD_cpl PF16697.5 ORF88459 - 5e-07 29.9 0.0 2.3e-06 27.8 0.1 2.0 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 ORF88459 - 1 9.6 5.3 2.4 8.4 5.3 1.6 1 0 0 1 1 1 0 FANCL C-terminal domain p450 PF00067.22 ORF61028 - 5.5e-52 177.1 0.6 7.9e-52 176.5 0.6 1.2 1 0 0 1 1 1 1 Cytochrome P450 ATC_hydrolase PF14196.6 ORF61028 - 0.033 15.0 0.5 0.15 12.8 0.1 2.1 2 1 0 2 2 2 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase DUF5547 PF17701.1 ORF61028 - 0.093 12.6 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5547) DUF3449 PF11931.8 ORF47676 - 2.7e-75 252.2 1.4 2.7e-75 252.2 1.4 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF3449) SF3A3 PF16837.5 ORF47676 - 6.4e-21 74.7 3.3 2.3e-20 72.9 3.3 2.0 1 1 0 1 1 1 1 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 SF3a60_bindingd PF12108.8 ORF47676 - 1.1e-08 34.8 0.1 1.1e-08 34.8 0.1 2.3 2 0 0 2 2 2 1 Splicing factor SF3a60 binding domain TMCO5 PF14992.6 ORF47676 - 0.0039 16.8 1.9 0.0039 16.8 1.9 1.8 2 0 0 2 2 2 1 TMCO5 family Pyr_redox_2 PF07992.14 ORF36218 - 4.9e-58 196.7 0.5 6.9e-58 196.2 0.5 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF36218 - 3.5e-16 59.5 6.8 1.4e-11 44.8 0.4 3.5 3 1 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF36218 - 3.5e-12 46.2 0.3 5.5e-08 32.4 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 ORF36218 - 1.8e-11 44.4 0.0 5.3e-11 42.9 0.0 1.8 1 0 0 1 1 1 1 Reductase C-terminal Trp_halogenase PF04820.14 ORF36218 - 1.2e-07 31.0 2.0 0.00076 18.4 0.1 3.2 2 1 1 3 3 3 2 Tryptophan halogenase HI0933_like PF03486.14 ORF36218 - 7.8e-07 28.1 0.5 0.1 11.3 0.1 3.4 3 1 1 4 4 4 2 HI0933-like protein DAO PF01266.24 ORF36218 - 4e-06 26.6 6.0 0.11 12.0 0.1 3.5 3 1 0 4 4 4 2 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 ORF36218 - 1.8e-05 24.7 1.4 0.97 9.4 0.1 4.1 3 1 1 4 4 4 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 ORF36218 - 4.6e-05 23.5 0.2 0.0029 17.8 0.1 2.9 3 0 0 3 3 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 ORF36218 - 0.00026 20.2 2.0 0.024 13.7 0.7 3.5 2 2 1 4 4 4 1 FAD binding domain Amino_oxidase PF01593.24 ORF36218 - 0.0011 18.3 0.3 0.46 9.7 0.0 2.5 3 0 0 3 3 3 2 Flavin containing amine oxidoreductase AlaDh_PNT_C PF01262.21 ORF36218 - 0.0024 17.2 1.2 0.12 11.7 0.0 2.5 2 1 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 ORF36218 - 0.027 13.7 1.2 0.095 11.9 0.1 2.3 3 0 0 3 3 3 0 Thi4 family Lycopene_cycl PF05834.12 ORF36218 - 0.036 13.1 0.1 1.3 7.9 0.0 3.0 3 1 1 4 4 4 0 Lycopene cyclase protein GIDA PF01134.22 ORF36218 - 0.059 12.4 6.3 2.2 7.2 0.1 4.0 5 1 1 6 6 6 0 Glucose inhibited division protein A TrkA_N PF02254.18 ORF36218 - 0.074 13.3 0.2 8.9 6.6 0.0 2.5 2 0 0 2 2 2 0 TrkA-N domain Eno-Rase_NADH_b PF12242.8 ORF36218 - 0.098 12.4 0.1 0.48 10.2 0.0 2.0 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Myb_DNA-binding PF00249.31 ORF2712 - 1.3e-49 166.1 13.4 3.5e-16 59.1 0.1 3.4 3 0 0 3 3 3 3 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF2712 - 5.4e-36 122.6 13.1 9.4e-17 61.0 1.0 3.8 1 1 2 3 3 3 3 Myb-like DNA-binding domain SLIDE PF09111.10 ORF2712 - 1.9e-07 31.1 1.0 0.016 15.3 0.2 4.0 1 1 2 3 3 3 3 SLIDE Myb_DNA-bind_7 PF15963.5 ORF2712 - 5.5e-05 23.0 9.0 0.0035 17.2 1.1 3.6 1 1 2 3 3 3 2 Myb DNA-binding like Rap1_C PF11626.8 ORF2712 - 0.00039 20.5 0.5 7.3 6.8 1.3 4.1 2 1 1 3 3 3 1 TRF2-interacting telomeric protein/Rap1 - C terminal domain Sigma70_r4_2 PF08281.12 ORF2712 - 0.022 14.4 0.0 0.35 10.6 0.0 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 SANT_DAMP1_like PF16282.5 ORF2712 - 0.12 12.5 4.3 6.6 7.0 0.6 3.5 1 1 2 3 3 3 0 SANT/Myb-like domain of DAMP1 RnaseA PF00074.20 ORF2712 - 0.83 10.1 7.3 2.5 8.6 7.3 1.8 1 0 0 1 1 1 0 Pancreatic ribonuclease LBP_BPI_CETP PF01273.25 ORF2272 - 7.1e-06 25.7 0.3 1.4e-05 24.7 0.0 1.7 2 0 0 2 2 2 1 LBP / BPI / CETP family, N-terminal domain LBP_BPI_CETP_C PF02886.17 ORF2272 - 0.0005 19.6 1.0 0.0017 17.8 0.0 2.3 3 1 1 4 4 4 1 LBP / BPI / CETP family, C-terminal domain UDPGT PF00201.18 ORF142107 - 8.3e-12 44.6 0.1 2.4e-11 43.1 0.1 1.6 1 1 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF142107 - 3.9e-11 43.2 0.0 6.5e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Epimerase_2 PF02350.19 ORF142107 - 0.0095 14.8 0.0 0.014 14.3 0.0 1.1 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.12 ORF142107 - 0.018 14.2 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF354) UvrD-helicase PF00580.21 ORF137601 - 1.2 8.6 13.1 0.37 10.3 10.1 1.6 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain UDPGT PF00201.18 ORF134094 - 8.3e-12 44.6 0.1 2.4e-11 43.1 0.1 1.6 1 1 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF134094 - 3.9e-11 43.2 0.0 6.5e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Epimerase_2 PF02350.19 ORF134094 - 0.0095 14.8 0.0 0.014 14.3 0.0 1.1 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.12 ORF134094 - 0.018 14.2 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF354) EF-hand_7 PF13499.6 ORF132683 - 1.1e-16 61.1 11.1 5.3e-09 36.4 2.5 2.9 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF132683 - 2.5e-11 42.6 19.7 0.00012 21.7 0.5 5.2 5 0 0 5 5 5 4 EF-hand domain EF-hand_1 PF00036.32 ORF132683 - 7.4e-11 40.8 23.9 7e-07 28.4 0.9 6.0 5 1 1 6 6 6 3 EF hand EF-hand_8 PF13833.6 ORF132683 - 1.1e-08 34.8 14.8 3.3e-08 33.3 2.8 4.0 3 1 1 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF132683 - 0.00012 21.4 13.0 0.0038 16.7 0.3 4.8 4 0 0 4 4 4 1 EF hand DUF2624 PF11116.8 ORF132683 - 0.025 15.4 0.1 0.48 11.3 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2624) MIR PF02815.19 ORF132683 - 0.033 14.0 0.3 0.092 12.6 0.3 1.7 1 1 0 1 1 1 0 MIR domain Excalibur PF05901.11 ORF132683 - 0.09 13.4 1.8 35 5.1 0.0 3.8 3 0 0 3 3 3 0 Excalibur calcium-binding domain EF-hand_4 PF12763.7 ORF132683 - 1.3 9.0 5.5 2.2 8.2 0.9 3.5 2 1 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF132683 - 3.9 7.9 6.9 30 5.0 0.3 3.6 3 1 1 4 4 4 0 EF-hand domain SAC3_GANP PF03399.16 ORF115384 - 3.9e-07 29.8 0.1 3.2e-05 23.5 0.1 2.3 1 1 0 1 1 1 1 SAC3/GANP family Metallophos PF00149.28 ORF112086 - 2e-11 44.8 3.7 2.2e-11 44.6 2.5 1.6 2 1 0 2 2 2 1 Calcineurin-like phosphoesterase PAN_4 PF14295.6 ORF112086 - 6.9e-05 22.7 0.1 0.00028 20.7 0.1 2.1 1 0 0 1 1 1 1 PAN domain PhoD PF09423.10 ORF112086 - 0.00055 19.0 0.2 0.066 12.2 0.1 2.2 2 0 0 2 2 2 2 PhoD-like phosphatase Metallophos_2 PF12850.7 ORF112086 - 0.00056 20.1 0.0 0.024 14.8 0.0 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PAN_1 PF00024.26 ORF112086 - 0.0014 18.6 0.0 0.0033 17.4 0.0 1.6 1 0 0 1 1 1 1 PAN domain AvrRpt-cleavage PF05627.11 ORF112086 - 0.019 14.3 0.1 0.064 12.6 0.1 1.9 1 0 0 1 1 1 0 Cleavage site for pathogenic type III effector avirulence factor Avr Metallophos PF00149.28 ORF105041 - 1.5e-09 38.6 5.6 2.6e-09 37.9 5.6 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF105041 - 0.0034 18.2 0.1 0.0091 16.8 0.1 1.7 1 0 0 1 1 1 1 Iron/zinc purple acid phosphatase-like protein C UDPGT PF00201.18 ORF102306 - 8.3e-12 44.6 0.1 2.4e-11 43.1 0.1 1.6 1 1 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF102306 - 3.9e-11 43.2 0.0 6.5e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Epimerase_2 PF02350.19 ORF102306 - 0.0095 14.8 0.0 0.014 14.3 0.0 1.1 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF354 PF04007.12 ORF102306 - 0.018 14.2 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF354) Sulfotransfer_1 PF00685.27 ORF102091 - 5.3e-11 42.5 0.5 3.5e-10 39.8 0.5 2.1 1 1 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF102091 - 1.6e-08 35.2 0.0 2.9e-06 27.8 0.0 2.8 3 0 0 3 3 3 2 Sulfotransferase family PFK PF00365.20 ORF9762 - 6.3e-06 25.7 0.1 1.2e-05 24.8 0.1 1.5 2 0 0 2 2 2 1 Phosphofructokinase FAD_binding_4 PF01565.23 ORF94920 - 1e-34 119.2 1.5 1.9e-34 118.4 1.5 1.4 1 0 0 1 1 1 1 FAD binding domain FAD-oxidase_C PF02913.19 ORF94920 - 7.3e-19 68.4 0.1 2.7e-18 66.5 0.1 2.1 1 1 0 1 1 1 1 FAD linked oxidases, C-terminal domain Cytokin-bind PF09265.10 ORF94920 - 0.059 12.8 0.0 0.09 12.2 0.0 1.3 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding RRF PF01765.19 ORF94654 - 0.045 13.7 0.8 0.045 13.7 0.8 2.2 2 0 0 2 2 2 0 Ribosome recycling factor RNase_E_G PF10150.9 ORF94654 - 0.11 11.9 5.3 0.61 9.5 0.2 2.5 2 0 0 2 2 2 0 Ribonuclease E/G family SLATT_fungal PF18142.1 ORF94654 - 0.76 9.8 3.0 3.6 7.6 0.1 2.7 3 0 0 3 3 3 0 SMODS and SLOG-associating 2TM effector domain MORN PF02493.20 ORF94654 - 1.2 9.1 13.0 0.34 10.9 3.2 3.6 3 0 0 3 3 3 0 MORN repeat zf-CRD PF17979.1 ORF94654 - 2.1 8.4 4.6 18 5.4 0.6 2.6 1 1 0 2 2 2 0 Cysteine rich domain with multizinc binding regions FlaC_arch PF05377.11 ORF94654 - 3.4 8.1 7.3 17 5.9 1.0 3.8 4 0 0 4 4 4 0 Flagella accessory protein C (FlaC) SlyX PF04102.12 ORF94654 - 4.6 7.9 6.3 4.8 7.9 0.9 2.9 2 1 1 3 3 3 0 SlyX OmpH PF03938.14 ORF94654 - 8.2 6.8 13.0 0.25 11.7 6.1 2.0 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) Peptidase_M16_C PF05193.21 ORF85725 - 7.6e-19 68.4 0.0 1.9e-18 67.1 0.0 1.7 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 ORF85725 - 2.8e-06 27.4 0.0 8e-06 25.9 0.0 1.8 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) TPR_19 PF14559.6 ORF85261 - 0.0035 17.8 2.4 0.85 10.2 5.1 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat Cytochrome_B PF00033.19 ORF70318 - 6.6e-11 42.4 13.1 6.6e-11 42.4 13.1 1.8 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 ORF70318 - 1.7e-05 24.9 1.8 1.7e-05 24.9 1.8 2.3 3 0 0 3 3 3 1 Cytochrome b(N-terminal)/b6/petB Asp PF00026.23 ORF67419 - 1.2e-29 103.7 0.6 9.7e-14 51.5 0.2 2.5 2 1 0 2 2 2 2 Eukaryotic aspartyl protease gag-asp_proteas PF13975.6 ORF67419 - 0.055 14.0 0.2 5.5 7.6 0.1 2.6 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 ORF67419 - 0.07 13.8 0.6 4.6 8.0 0.1 2.6 2 0 0 2 2 2 0 Aspartyl protease TAXi_N PF14543.6 ORF67419 - 0.39 10.9 3.1 3.4 7.9 0.2 2.9 1 1 2 3 3 3 0 Xylanase inhibitor N-terminal YkyA PF10368.9 ORF63871 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF63871 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF63871 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF63415 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF63415 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF63415 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor MFS_1 PF07690.16 ORF631 - 2.4e-33 115.5 37.7 2.3e-29 102.4 30.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF631 - 1.4e-05 24.6 13.3 0.00054 19.4 5.8 2.3 2 0 0 2 2 2 2 Uncharacterised MFS-type transporter YbfB YkyA PF10368.9 ORF55965 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF55965 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF55965 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor EF-hand_7 PF13499.6 ORF53755 - 3.6e-20 72.2 7.1 1.8e-11 44.3 2.5 3.0 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF53755 - 1.1e-14 52.8 13.5 3.8e-06 26.1 0.3 5.3 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF53755 - 1e-13 50.9 8.9 1.6e-09 37.4 1.5 3.6 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF53755 - 4.3e-12 44.9 14.8 0.00074 19.3 0.8 4.8 4 0 0 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 ORF53755 - 4.4e-08 32.3 11.2 2.9e-05 23.3 0.3 4.5 4 1 0 4 4 4 2 EF hand TerB PF05099.13 ORF53755 - 0.11 12.5 0.0 0.32 10.9 0.0 1.8 1 0 0 1 1 1 0 Tellurite resistance protein TerB Dockerin_1 PF00404.18 ORF53755 - 0.15 12.3 2.3 5.7 7.2 2.7 2.7 1 1 1 2 2 2 0 Dockerin type I domain ABC_export PF16962.5 ORF53755 - 0.41 9.0 1.3 0.58 8.5 1.3 1.1 1 0 0 1 1 1 0 Putative ABC exporter SPARC_Ca_bdg PF10591.9 ORF53755 - 1.1 9.5 6.9 5.9 7.3 0.1 3.9 3 2 0 4 4 4 0 Secreted protein acidic and rich in cysteine Ca binding region YkyA PF10368.9 ORF52160 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF52160 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF52160 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF52062 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF52062 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF52062 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF51657 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF51657 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF51657 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor Ion_trans PF00520.31 ORF46202 - 1.5e-12 47.3 8.2 2.2e-12 46.8 8.2 1.1 1 0 0 1 1 1 1 Ion transport protein DHHC PF01529.20 ORF46202 - 0.22 11.6 1.3 0.35 11.0 1.3 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase SR-25 PF10500.9 ORF46202 - 0.81 9.3 9.9 1.3 8.6 9.9 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein YkyA PF10368.9 ORF45229 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF45229 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain YkyA PF10368.9 ORF41956 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF41956 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF41956 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor MFS_1 PF07690.16 ORF26154 - 2.4e-33 115.5 37.7 2.3e-29 102.4 30.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF26154 - 1.4e-05 24.6 13.3 0.00054 19.4 5.8 2.3 2 0 0 2 2 2 2 Uncharacterised MFS-type transporter YbfB YkyA PF10368.9 ORF25648 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF25648 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF25648 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF25196 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF25196 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF25196 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor GST_N_3 PF13417.6 ORF16100 - 1.8e-22 79.5 0.0 2e-11 44.1 0.0 2.7 3 0 0 3 3 3 2 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF16100 - 2.8e-16 59.6 0.0 3.8e-08 33.5 0.0 2.6 2 0 0 2 2 2 2 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF16100 - 3.2e-13 49.8 0.0 6.7e-06 26.4 0.0 2.6 2 0 0 2 2 2 2 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF16100 - 1.2e-11 44.5 0.3 1.9e-05 24.6 0.0 2.9 3 0 0 3 3 3 2 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF16100 - 1.8e-06 28.1 0.3 0.00085 19.5 0.3 2.6 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF16100 - 3.2e-06 27.3 0.0 0.025 14.8 0.0 3.1 3 0 0 3 3 3 2 Glutaredoxin Arm-DNA-bind_4 PF14657.6 ORF16100 - 0.031 14.0 0.6 1.4 8.7 0.0 2.6 2 0 0 2 2 2 0 Arm DNA-binding domain MORN PF02493.20 ORF151553 - 0.81 9.7 8.7 2.6 8.1 4.1 3.0 2 0 0 2 2 2 0 MORN repeat DUF1298 PF06974.13 ORF149088 - 4.2e-19 68.9 0.0 1e-18 67.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF149088 - 8.1e-06 25.8 0.0 1.8e-05 24.7 0.0 1.5 2 0 0 2 2 2 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF149088 - 0.0015 17.2 0.2 0.0026 16.4 0.2 1.3 1 0 0 1 1 1 1 Alcohol acetyltransferase Condensation PF00668.20 ORF149088 - 0.006 15.3 0.3 0.0077 14.9 0.3 1.1 1 0 0 1 1 1 1 Condensation domain Cytochrome_B PF00033.19 ORF147890 - 6.6e-11 42.4 13.1 6.6e-11 42.4 13.1 1.8 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 ORF147890 - 1.7e-05 24.9 1.8 1.7e-05 24.9 1.8 2.3 3 0 0 3 3 3 1 Cytochrome b(N-terminal)/b6/petB Asp PF00026.23 ORF147518 - 3.4e-23 82.5 1.6 4.6e-23 82.1 1.6 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF147518 - 3.5e-05 23.7 0.0 6.2e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Piezo_RRas_bdg PF12166.8 ORF143935 - 9.1e-33 114.2 18.4 4.8e-30 105.2 16.2 2.3 2 0 0 2 2 2 2 Piezo non-specific cation channel, R-Ras-binding domain Mcm10 PF09332.11 ORF143935 - 2.2 7.6 17.1 4 6.8 17.1 1.3 1 0 0 1 1 1 0 Mcm10 replication factor YkyA PF10368.9 ORF137290 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF137290 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF137290 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor MFS_1 PF07690.16 ORF135413 - 2.4e-33 115.5 37.7 2.3e-29 102.4 30.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF135413 - 1.4e-05 24.6 13.3 0.00054 19.4 5.8 2.3 2 0 0 2 2 2 2 Uncharacterised MFS-type transporter YbfB YkyA PF10368.9 ORF133839 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF133839 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF133839 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor YkyA PF10368.9 ORF133600 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF133600 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF133600 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor MatE PF01554.18 ORF133401 - 3.8e-49 166.4 28.7 9.4e-31 106.6 9.7 2.3 2 0 0 2 2 2 2 MatE Cytochrome_B PF00033.19 ORF131133 - 6.6e-11 42.4 13.1 6.6e-11 42.4 13.1 1.8 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 ORF131133 - 1.7e-05 24.9 1.8 1.7e-05 24.9 1.8 2.3 3 0 0 3 3 3 1 Cytochrome b(N-terminal)/b6/petB YkyA PF10368.9 ORF128519 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF128519 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF128519 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor Chitin_synth_2 PF03142.15 ORF122884 - 2.6e-05 23.1 16.9 0.00015 20.5 6.9 2.6 1 1 1 2 2 2 2 Chitin synthase DUF962 PF06127.11 ORF122884 - 0.1 12.7 1.9 0.4 10.8 1.9 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF962) TPR_10 PF13374.6 ORF121048 - 2.4e-59 195.7 24.0 1.4e-09 37.5 0.2 10.2 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_12 PF13424.6 ORF121048 - 9.7e-57 189.2 26.4 6.7e-15 55.2 0.9 7.0 3 2 4 8 8 8 8 Tetratricopeptide repeat TPR_2 PF07719.17 ORF121048 - 6.6e-21 72.7 17.3 0.0077 16.3 0.3 10.1 10 0 0 10 10 10 5 Tetratricopeptide repeat TPR_14 PF13428.6 ORF121048 - 5.1e-20 70.5 22.3 0.019 15.8 0.1 9.8 8 2 2 10 10 10 6 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF121048 - 1.5e-19 70.5 15.4 4e-17 62.6 9.9 3.1 1 1 2 3 3 3 2 MalT-like TPR region TPR_8 PF13181.6 ORF121048 - 1.1e-18 65.8 4.6 0.0026 17.8 0.0 8.4 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF121048 - 6.1e-16 58.7 18.8 0.0031 18.0 0.7 7.6 5 1 2 7 7 7 4 Tetratricopeptide repeat TPR_4 PF07721.14 ORF121048 - 1e-14 53.5 17.2 0.025 15.2 0.2 8.8 9 0 0 9 9 8 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF121048 - 4.1e-13 48.6 15.5 0.16 11.9 0.2 9.6 10 0 0 10 10 10 5 Tetratricopeptide repeat TPR_7 PF13176.6 ORF121048 - 5.2e-11 41.8 18.5 0.022 14.8 0.1 7.9 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_17 PF13431.6 ORF121048 - 1.4e-06 28.2 8.6 11 6.7 0.0 7.6 9 0 0 9 9 7 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF121048 - 1.7e-06 28.6 15.3 30 5.3 0.1 8.3 7 1 1 8 8 7 0 Tetratricopeptide repeat TPR_5 PF12688.7 ORF121048 - 5.1e-05 23.5 13.1 0.019 15.2 0.6 4.7 2 1 4 6 6 6 2 Tetratrico peptide repeat ANAPC3 PF12895.7 ORF121048 - 0.00026 21.2 14.4 7.4 6.9 0.4 6.9 3 1 2 6 6 6 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_20 PF14561.6 ORF121048 - 0.0024 18.1 8.5 2.1 8.7 0.3 5.3 4 2 2 6 6 6 3 Tetratricopeptide repeat Daxx PF03344.15 ORF121048 - 0.048 13.7 2.2 9.4 6.4 0.1 4.0 4 0 0 4 4 4 0 Daxx N-terminal Rassf1C-interacting domain APG6 PF04111.12 ORF121048 - 0.085 12.8 1.4 23 4.9 0.0 3.4 3 1 0 3 3 3 0 Apg6 BARA domain TPR_6 PF13174.6 ORF121048 - 0.17 12.6 12.1 15 6.5 0.0 7.1 8 0 0 8 8 7 0 Tetratricopeptide repeat PrmC_N PF17827.1 ORF121048 - 1.1 9.9 11.3 44 4.8 0.2 6.1 6 1 0 6 6 5 0 PrmC N-terminal domain YkyA PF10368.9 ORF112966 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF112966 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF112966 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor Cytochrome_B PF00033.19 ORF108908 - 6.6e-11 42.4 13.1 6.6e-11 42.4 13.1 1.8 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 ORF108908 - 1.7e-05 24.9 1.8 1.7e-05 24.9 1.8 2.3 3 0 0 3 3 3 1 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 ORF107072 - 6.6e-11 42.4 13.1 6.6e-11 42.4 13.1 1.8 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 ORF107072 - 1.7e-05 24.9 1.8 1.7e-05 24.9 1.8 2.3 3 0 0 3 3 3 1 Cytochrome b(N-terminal)/b6/petB RNase_E_G PF10150.9 ORF101844 - 0.14 11.6 5.5 0.61 9.5 0.2 2.5 2 0 0 2 2 2 0 Ribonuclease E/G family SLATT_fungal PF18142.1 ORF101844 - 1.2 9.1 3.2 3.6 7.6 0.1 2.7 3 0 0 3 3 3 0 SMODS and SLOG-associating 2TM effector domain MORN PF02493.20 ORF101844 - 1.2 9.1 13.0 0.34 10.9 3.2 3.6 3 0 0 3 3 3 0 MORN repeat zf-CRD PF17979.1 ORF101844 - 1.8 8.7 4.9 11 6.1 0.7 2.6 1 1 1 2 2 2 0 Cysteine rich domain with multizinc binding regions FlaC_arch PF05377.11 ORF101844 - 1.9 9.0 7.5 8.6 6.8 1.1 3.8 4 0 0 4 4 4 0 Flagella accessory protein C (FlaC) SlyX PF04102.12 ORF101844 - 2.9 8.6 6.7 2.7 8.7 1.1 2.9 2 1 1 3 3 3 0 SlyX DUF4795 PF16043.5 ORF101844 - 6.4 6.3 15.6 4.5 6.8 0.3 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4795) Phage_HK97_TLTM PF06120.11 ORF101844 - 8.5 5.5 9.9 1.1 8.3 4.7 2.1 3 0 0 3 3 3 0 Tail length tape measure protein YkyA PF10368.9 ORF100897 - 0.11 12.1 0.7 32 4.1 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein Glycos_trans_3N PF02885.17 ORF100897 - 0.22 11.4 2.0 1.4 8.8 0.3 3.1 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain PMEI PF04043.15 ORF100897 - 0.22 11.9 0.0 1.9 8.8 0.0 2.3 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor ABC_tran PF00005.27 ORF9951 - 2.2e-27 96.2 0.0 4.9e-27 95.1 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF9951 - 3.8e-15 56.3 2.7 5.3e-15 55.8 2.7 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF9951 - 5.6e-06 25.9 0.6 0.00052 19.5 0.1 2.1 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF9951 - 0.0023 18.0 0.0 0.0073 16.4 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF9951 - 0.0038 17.3 0.2 0.028 14.5 0.0 2.4 2 1 0 2 2 2 1 Immunity protein 58 AAA_29 PF13555.6 ORF9951 - 0.02 14.6 0.0 0.051 13.3 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF9951 - 0.051 14.1 0.2 0.13 12.7 0.2 1.7 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF9951 - 0.056 13.5 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_18 PF13238.6 ORF9951 - 0.058 13.9 0.1 0.15 12.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 ORF9951 - 0.11 12.4 0.3 1 9.2 0.0 2.5 3 0 0 3 3 3 0 NTPase CbiA PF01656.23 ORF9951 - 0.18 11.9 0.1 0.38 10.8 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RNA_helicase PF00910.22 ORF9951 - 0.28 11.6 1.3 3.4 8.1 0.0 2.8 3 0 0 3 3 3 0 RNA helicase DUF5406 PF17400.2 ORF94935 - 0.021 15.2 0.4 0.092 13.2 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5406) Fez1 PF06818.15 ORF76955 - 0.0045 17.5 7.5 0.0045 17.5 7.5 3.5 1 1 2 3 3 3 2 Fez1 SKA1 PF07160.12 ORF76955 - 0.02 14.8 12.9 0.2 11.5 3.5 2.6 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 Bap31_Bap29_C PF18035.1 ORF76955 - 2.2 8.4 9.4 0.95 9.5 1.6 3.6 3 0 0 3 3 3 0 Bap31/Bap29 cytoplasmic coiled-coil domain HALZ PF02183.18 ORF76955 - 7.9 6.8 16.1 3.5 7.9 0.8 4.3 3 1 1 4 4 4 0 Homeobox associated leucine zipper Ion_trans PF00520.31 ORF6967 - 2e-15 56.7 14.6 2.8e-15 56.2 14.6 1.2 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF6967 - 9.4e-10 37.7 10.6 1.2e-08 34.1 6.0 2.1 1 1 1 2 2 2 2 Polycystin cation channel CitMHS PF03600.16 ORF6967 - 0.033 13.4 1.3 0.16 11.1 0.0 2.0 2 0 0 2 2 2 0 Citrate transporter DivIC PF04977.15 ORF6967 - 0.12 12.1 0.2 0.37 10.6 0.2 1.8 1 0 0 1 1 1 0 Septum formation initiator AAA_28 PF13521.6 ORF49723 - 4.3e-21 75.8 0.0 9.9e-21 74.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF49723 - 0.033 14.7 0.2 0.36 11.4 0.0 2.7 2 1 1 3 3 3 0 AAA domain MatE PF01554.18 ORF44164 - 1.4e-21 76.9 44.3 4.1e-17 62.3 6.3 3.6 3 1 1 4 4 4 2 MatE DUF2484 PF10658.9 ORF44164 - 7.2 7.0 8.1 4.9 7.5 3.6 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2484) Aa_trans PF01490.18 ORF29042 - 2.3e-48 164.9 26.8 2.7e-48 164.7 26.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF29042 - 6.9e-10 38.5 24.3 2.3e-09 36.8 24.3 1.9 1 1 0 1 1 1 1 Tryptophan/tyrosine permease family Cytochrom_B_C PF00032.17 ORF29042 - 0.21 11.9 12.6 2.5 8.5 0.5 4.4 3 1 1 4 4 4 0 Cytochrome b(C-terminal)/b6/petD DUF4311 PF14188.6 ORF29042 - 1.8 8.3 9.0 0.19 11.5 3.3 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4311) MFS_1 PF07690.16 ORF28615 - 2.5e-14 53.0 31.6 2.5e-14 53.0 31.6 1.8 1 1 0 1 1 1 1 Major Facilitator Superfamily UPF0542 PF15086.6 ORF28615 - 0.12 12.3 0.6 3.3 7.7 0.1 2.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0542 DUF5337 PF17272.2 ORF28615 - 0.38 10.6 0.1 0.38 10.6 0.1 2.8 3 1 0 3 3 3 0 Family of unknown function (DUF5337) DUF5111 PF17138.4 ORF143880 - 0.095 12.5 0.8 0.39 10.6 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5111) FBPase PF00316.20 ORF143880 - 0.11 12.0 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 Fructose-1-6-bisphosphatase, N-terminal domain MFS_1 PF07690.16 ORF142372 - 4.4e-41 141.0 53.2 1.4e-37 129.5 30.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF142372 - 1.9e-09 36.6 20.0 1.9e-09 36.6 20.0 2.0 1 1 0 2 2 2 1 MFS/sugar transport protein Sugar_tr PF00083.24 ORF142372 - 3.1e-07 29.6 30.9 0.00029 19.8 11.2 2.8 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 ORF142372 - 3.9e-05 22.7 25.3 0.0037 16.2 24.6 2.6 1 1 0 1 1 1 1 MFS_1 like family OATP PF03137.20 ORF142372 - 1 7.5 23.5 0.017 13.5 5.3 3.7 2 2 2 4 4 4 0 Organic Anion Transporter Polypeptide (OATP) family NapB PF03892.14 ORF134274 - 0.034 14.2 0.2 0.071 13.1 0.2 1.5 1 0 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) MFS_1 PF07690.16 ORF128569 - 1.3e-37 129.5 35.9 1.7e-37 129.2 30.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF128569 - 1.9e-09 36.6 20.0 1.9e-09 36.6 20.0 2.0 1 1 0 2 2 2 1 MFS/sugar transport protein Sugar_tr PF00083.24 ORF128569 - 2.4e-07 30.0 30.6 0.00028 19.9 11.0 2.8 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 ORF128569 - 3.9e-05 22.7 25.3 0.0037 16.2 24.6 2.6 1 1 0 1 1 1 1 MFS_1 like family OATP PF03137.20 ORF128569 - 1.4 7.1 23.9 0.02 13.2 5.8 3.7 2 2 2 4 4 4 0 Organic Anion Transporter Polypeptide (OATP) family Peptidase_S28 PF05577.12 ORF123656 - 6.5e-76 255.9 5.2 4.3e-75 253.2 5.2 1.9 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF123656 - 0.0029 17.1 0.7 0.0059 16.1 0.1 1.8 2 0 0 2 2 2 1 Prolyl oligopeptidase family Pkinase PF00069.25 ORF119597 - 2e-78 263.4 0.0 3.7e-78 262.5 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF119597 - 3e-42 144.7 0.0 4.6e-42 144.1 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF119597 - 9.9e-30 99.9 16.2 1.3e-07 30.6 0.1 4.8 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF119597 - 6e-27 93.9 16.9 4.2e-13 49.6 1.3 4.1 4 0 0 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF119597 - 4.4e-25 86.0 12.5 1.8e-06 27.2 0.1 4.8 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF119597 - 3.3e-24 82.7 12.5 1.1e-07 31.2 0.1 5.3 5 0 0 5 5 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF119597 - 2.2e-12 46.6 21.1 0.00012 21.9 1.4 5.1 2 1 3 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF119597 - 4.9e-07 30.1 4.1 0.0021 18.3 0.5 2.6 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF119597 - 0.00042 19.7 0.0 0.00075 18.9 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF119597 - 0.0031 17.4 10.7 0.15 12.0 0.5 3.8 2 1 2 4 4 4 2 Cytoskeletal-regulatory complex EF hand PMBR PF09373.10 ORF119597 - 0.0055 16.8 0.0 1.5 9.1 0.0 3.9 3 0 0 3 3 3 1 Pseudomurein-binding repeat EF-hand_11 PF08976.11 ORF119597 - 0.0085 17.0 0.5 8.4 7.3 0.1 3.0 1 1 2 3 3 3 1 EF-hand domain EF-hand_9 PF14658.6 ORF119597 - 0.032 14.5 0.3 0.98 9.8 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain MecA_N PF05223.11 ORF119597 - 0.08 13.2 7.8 7.3 6.9 0.2 4.4 2 1 2 4 4 4 0 NTF2-like N-terminal transpeptidase domain EF-hand_10 PF14788.6 ORF119597 - 0.099 12.5 11.3 0.93 9.4 0.2 5.0 4 1 1 5 5 5 0 EF hand MgtE_N PF03448.17 ORF119597 - 0.74 10.5 6.4 24 5.6 0.1 3.8 3 1 0 3 3 3 0 MgtE intracellular N domain Caleosin PF05042.13 ORF119597 - 1.3 8.9 9.1 15 5.4 0.4 3.9 2 1 2 4 4 4 0 Caleosin related protein Pkinase PF00069.25 ORF119058 - 1.5e-50 172.0 0.0 2e-50 171.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF119058 - 2.2e-33 115.7 0.0 3.2e-33 115.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF119058 - 6.9e-06 25.6 0.0 1.3e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF119058 - 0.02 14.9 0.3 0.52 10.2 0.0 2.4 2 0 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF119058 - 0.028 13.2 0.0 0.041 12.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase AKNA PF12443.8 ORF117123 - 0.15 12.7 0.2 0.15 12.7 0.2 3.5 3 1 1 4 4 4 0 AT-hook-containing transcription factor Spc7 PF08317.11 ORF117123 - 0.29 10.0 41.6 0.018 14.0 19.8 3.4 2 1 1 3 3 3 0 Spc7 kinetochore protein Gon7 PF08738.10 ORF117123 - 0.43 10.7 13.9 0.069 13.2 0.6 3.4 2 1 1 3 3 3 0 Gon7 family Laminin_II PF06009.12 ORF117123 - 3.2 7.8 31.1 3.8 7.5 0.7 4.5 2 1 2 4 4 4 0 Laminin Domain II DUF883 PF05957.13 ORF117123 - 3.9 8.1 7.9 6 7.5 1.2 3.8 2 1 2 4 4 4 0 Bacterial protein of unknown function (DUF883) COG2 PF06148.11 ORF117123 - 5 7.2 26.3 1.5 8.9 0.2 4.4 3 1 1 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 WD40 PF00400.32 ORF109308 - 1.4e-45 152.3 15.2 3.1e-09 37.3 1.0 7.3 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF109308 - 4.9e-11 42.8 3.9 0.076 13.3 0.0 5.1 2 2 3 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF109308 - 2e-06 27.9 0.8 0.00028 20.8 0.1 2.7 2 1 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A Nup160 PF11715.8 ORF109308 - 0.00042 19.1 2.6 2.7 6.5 0.1 4.7 3 1 2 5 5 5 1 Nucleoporin Nup120/160 LisH PF08513.11 ORF109308 - 0.032 14.2 1.0 0.068 13.2 1.0 1.6 1 0 0 1 1 1 0 LisH Csm1_N PF18504.1 ORF109308 - 0.25 11.7 7.8 0.7 10.3 0.4 2.8 2 0 0 2 2 2 0 Csm1 N-terminal domain Presenilin PF01080.17 ORF109308 - 1.5 7.5 3.3 2.3 6.9 3.3 1.2 1 0 0 1 1 1 0 Presenilin SlyX PF04102.12 ORF109308 - 1.5 9.5 4.9 3.1 8.5 0.2 2.8 3 0 0 3 3 3 0 SlyX MFS_1 PF07690.16 ORF108 - 1.5e-28 99.8 38.7 1.5e-28 99.8 38.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF108 - 9.2e-10 38.0 39.9 4.9e-09 35.6 39.9 2.0 1 1 0 1 1 1 1 Sugar (and other) transporter OATP PF03137.20 ORF108 - 2.9e-08 32.5 16.2 2.9e-08 32.5 16.2 2.8 1 1 1 2 2 2 2 Organic Anion Transporter Polypeptide (OATP) family MatE PF01554.18 ORF107262 - 1.2e-21 77.0 44.3 4.1e-17 62.3 6.3 3.7 3 1 1 4 4 4 2 MatE DUF2484 PF10658.9 ORF107262 - 7.2 7.0 8.1 4.9 7.5 3.6 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2484) DUF3139 PF11337.8 ORF105673 - 0.039 14.6 0.8 0.27 11.9 0.6 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) SpoIIM PF01944.17 ORF105673 - 0.076 13.1 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Stage II sporulation protein M Pox_LP_H2 PF03356.15 ORF105673 - 0.1 12.4 0.7 0.2 11.5 0.7 1.4 1 0 0 1 1 1 0 Viral late protein H2 TT_ORF1 PF02956.14 ORF100270 - 0.022 13.5 2.0 3.6 6.2 0.0 2.2 2 0 0 2 2 2 0 TT viral orf 1 Adenine_glyco PF03352.13 ORF100270 - 0.024 14.4 0.2 0.087 12.6 0.0 1.9 2 0 0 2 2 2 0 Methyladenine glycosylase ASH PF15780.5 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 7.6e-15 54.9 1.1 0.00016 21.8 0.0 4.2 4 0 0 4 4 4 3 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF1573 PF07610.11 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 7.8e-06 25.8 0.4 6 7.0 0.0 4.7 4 2 0 4 4 4 2 Protein of unknown function (DUF1573) Motile_Sperm PF00635.26 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 8.4e-06 25.6 2.1 0.0016 18.3 0.1 3.6 3 1 0 3 3 3 1 MSP (Major sperm protein) domain MYCBPAP PF14646.6 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.01 14.8 1.1 0.084 11.8 0.1 2.7 2 1 0 3 3 3 0 MYCBP-associated protein family Peptidase_C23 PF05379.11 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.051 13.7 0.1 1.3 9.2 0.1 2.9 3 1 1 4 4 4 0 Carlavirus endopeptidase FixG_C PF11614.8 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.051 13.8 0.4 1 9.6 0.0 2.5 2 1 1 3 3 3 0 IG-like fold at C-terminal of FixG, putative oxidoreductase TMEM131_like PF12371.8 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.052 13.8 0.1 68 3.8 0.0 3.4 3 0 0 3 3 3 0 Transmembrane protein 131-like TonB_N PF16031.5 NODE_8754_length_1447_cov_90.482295_g6435_i0reverse_frame_3 - 0.16 12.5 6.9 0.45 11.0 6.9 1.8 1 0 0 1 1 1 0 TonB polyproline region BPD_transp_1 PF00528.22 ORF99264 - 1.2 8.8 10.4 6.7 6.4 1.6 2.7 2 0 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component PriA_C PF18074.1 ORF98221 - 1.6e-17 64.1 0.1 2.3e-16 60.4 0.0 2.9 3 1 0 3 3 3 1 Primosomal protein N C-terminal domain Helicase_C PF00271.31 ORF98221 - 1.8e-09 37.9 0.0 8.4e-06 26.1 0.0 2.6 3 0 0 3 3 2 2 Helicase conserved C-terminal domain PriA_CRR PF18319.1 ORF98221 - 8.2e-08 32.1 17.8 8.2e-08 32.1 17.8 3.0 3 0 0 3 3 3 1 PriA DNA helicase Cys-rich region (CRR) domain DEAD PF00270.29 ORF98221 - 5.7e-07 29.5 0.0 1.9e-06 27.8 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase zinc-ribbons_6 PF07191.12 ORF98221 - 0.0019 18.2 4.7 0.0042 17.0 4.7 1.5 1 0 0 1 1 1 1 zinc-ribbons ResIII PF04851.15 ORF98221 - 0.042 13.9 0.0 0.069 13.1 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit zinc_ribbon_12 PF11331.8 ORF98221 - 0.23 11.3 1.5 0.61 9.9 1.5 1.8 1 0 0 1 1 1 0 Probable zinc-ribbon domain zinc_ribbon_5 PF13719.6 ORF98221 - 0.37 10.6 3.0 5.6 6.8 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF98221 - 0.84 9.7 13.4 5 7.2 6.3 2.8 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-NADH-PPase PF09297.11 ORF98221 - 1.9 8.2 15.9 5.6 6.7 0.5 3.5 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain HypA PF01155.19 ORF98221 - 6.2 6.9 10.2 83 3.3 10.2 2.2 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Nsp1_C PF05064.13 ORF7956 - 3.1e-08 33.4 7.4 3.1e-08 33.4 7.4 1.9 2 0 0 2 2 2 1 Nsp1-like C-terminal region Phage_holin_T PF11031.8 ORF7956 - 0.057 12.9 0.3 0.1 12.1 0.3 1.3 1 0 0 1 1 1 0 Bacteriophage T holin ThiI PF02568.14 ORF76139 - 8.8e-82 273.5 0.0 1.3e-81 272.9 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 ORF76139 - 1.2e-28 100.0 0.4 1.2e-28 100.0 0.4 1.9 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 ORF76139 - 0.00061 19.3 0.3 0.27 10.7 0.0 3.3 2 1 1 3 3 3 2 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 ORF76139 - 0.0008 19.0 0.2 0.0082 15.7 0.0 2.5 2 1 0 3 3 3 1 Diphthamide synthase tRNA_Me_trans PF03054.16 ORF76139 - 0.027 13.3 0.0 0.12 11.2 0.0 2.1 2 0 0 2 2 2 0 tRNA methyl transferase NAD_synthase PF02540.17 ORF76139 - 0.2 10.8 0.9 1.4 8.0 0.1 2.2 2 0 0 2 2 2 0 NAD synthase G10 PF01125.17 ORF75706 - 0.049 13.4 0.8 0.097 12.4 0.8 1.5 1 0 0 1 1 1 0 G10 protein LMBR1 PF04791.16 ORF72132 - 2e-24 86.4 40.1 8.6e-19 67.8 19.9 2.0 1 1 1 2 2 2 2 LMBR1-like membrane protein Ni_hydr_CYTB PF01292.20 ORF72132 - 0.0087 15.7 2.4 0.0087 15.7 2.4 3.2 3 1 0 3 3 3 1 Prokaryotic cytochrome b561 DUF2231 PF09990.9 ORF72132 - 0.15 12.5 0.3 0.15 12.5 0.3 2.5 2 0 0 2 2 2 0 Predicted membrane protein (DUF2231) DUF1980 PF09323.10 ORF72132 - 0.72 9.7 28.7 0.34 10.8 3.7 4.4 4 0 0 4 4 4 0 Domain of unknown function (DUF1980) ANTH PF07651.16 ORF19798 - 3.5e-14 52.5 2.7 7.4e-14 51.4 2.7 1.5 1 0 0 1 1 1 1 ANTH domain Vps51 PF08700.11 ORF19798 - 0.0012 18.9 5.9 0.2 11.8 0.6 2.9 2 0 0 2 2 2 2 Vps51/Vps67 DUF5070 PF16802.5 ORF19798 - 0.28 11.2 1.4 3.5 7.6 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5070) NEMP PF10225.9 ORF19798 - 3.9 7.1 4.5 1.2 8.8 0.1 2.2 3 0 0 3 3 3 0 NEMP family ABC_tran PF00005.27 ORF108369 - 1.1e-29 103.7 0.0 2.7e-29 102.4 0.0 1.7 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF108369 - 1.2e-10 41.7 3.0 8.5e-08 32.4 0.0 3.0 3 1 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF108369 - 0.0023 17.4 0.1 0.014 14.9 0.0 2.4 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain Baculo_DNA_bind PF04786.12 ORF108369 - 0.0078 15.6 0.2 0.088 12.2 0.1 2.4 2 0 0 2 2 2 1 ssDNA binding protein G2F PF07474.12 ORF108369 - 0.03 14.1 0.0 0.088 12.6 0.0 1.8 1 0 0 1 1 1 0 G2F domain AAA PF00004.29 ORF108369 - 0.052 14.0 0.1 5.2 7.5 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF108369 - 0.14 12.5 0.0 0.29 11.5 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain Acatn PF13000.7 ORF101434 - 4.7e-55 187.1 32.0 2.4e-51 174.9 15.2 4.0 1 1 3 4 4 4 3 Acetyl-coenzyme A transporter 1 MFS_1 PF07690.16 ORF101434 - 3.7e-10 39.3 3.5 3.7e-10 39.3 3.5 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily FBPase PF00316.20 ORF100128 - 7.5e-34 116.8 0.0 1.5e-33 115.9 0.0 1.5 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Sigma54_DBD PF04552.13 ORF95367 - 6.1e-71 237.3 0.4 1.2e-70 236.4 0.4 1.5 1 0 0 1 1 1 1 Sigma-54, DNA binding domain Sigma54_CBD PF04963.13 ORF95367 - 3.2e-62 209.6 0.2 3.2e-62 209.6 0.2 1.8 2 0 0 2 2 2 1 Sigma-54 factor, core binding domain Sigma54_AID PF00309.20 ORF95367 - 5.1e-16 58.3 20.9 1.3e-15 57.0 20.9 1.8 1 0 0 1 1 1 1 Sigma-54 factor, Activator interacting domain (AID) MarR PF01047.22 ORF95367 - 0.098 12.6 0.3 5.6 7.0 0.1 3.0 3 0 0 3 3 3 0 MarR family EF-hand_6 PF13405.6 ORF75467 - 4.3e-15 54.3 0.4 6.8e-06 25.6 0.0 5.2 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF75467 - 2.9e-14 51.4 0.1 3.1e-05 23.2 0.0 5.6 5 0 0 5 5 5 3 EF hand EF-hand_7 PF13499.6 ORF75467 - 1.3e-12 48.0 0.7 0.0002 21.7 0.0 3.9 2 2 2 4 4 4 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF75467 - 8.1e-08 32.0 0.0 0.0076 16.1 0.0 5.0 5 0 0 5 5 5 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF75467 - 3e-07 29.6 1.0 8.5e-05 21.9 0.0 3.5 3 0 0 3 3 3 1 EF hand DUF5600 PF18150.1 ORF75467 - 0.014 16.0 1.1 2.8 8.6 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF5600) DUF2407_C PF13373.6 ORF75467 - 0.031 14.5 0.2 7.3 6.8 0.1 2.4 2 0 0 2 2 2 0 DUF2407 C-terminal domain SAP PF02037.27 ORF75467 - 0.035 13.9 0.0 0.11 12.2 0.0 1.9 1 0 0 1 1 1 0 SAP domain FANC_SAP PF18081.1 ORF75467 - 0.48 10.6 5.0 0.18 12.0 0.5 2.7 4 0 0 4 4 4 0 Fanconi anemia-associated nuclease SAP domain ENTH PF01417.20 ORF70213 - 6.2e-29 100.6 0.1 1.4e-28 99.5 0.0 1.6 2 0 0 2 2 2 1 ENTH domain ANTH PF07651.16 ORF70213 - 0.01 14.8 0.0 0.016 14.2 0.0 1.2 1 0 0 1 1 1 0 ANTH domain Ion_trans PF00520.31 ORF44318 - 3.7e-11 42.7 18.7 5.3e-11 42.2 18.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF44318 - 0.00098 18.5 0.0 0.0031 16.9 0.0 2.0 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF44318 - 0.025 14.5 0.0 0.11 12.5 0.0 2.2 1 0 0 1 1 1 0 EF-hand domain EF-hand_5 PF13202.6 ORF44318 - 0.073 12.6 0.0 0.24 11.0 0.0 1.9 1 0 0 1 1 1 0 EF hand SecY PF00344.20 ORF42766 - 1.2e-61 208.6 14.1 1.6e-61 208.2 14.1 1.2 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 ORF42766 - 3.2e-16 58.9 0.1 1.1e-15 57.2 0.1 2.0 1 0 0 1 1 1 1 Plug domain of Sec61p Sugar_tr PF00083.24 ORF42088 - 0.003 16.5 0.6 0.0059 15.5 0.6 1.4 1 0 0 1 1 1 1 Sugar (and other) transporter TRP PF06011.12 ORF18569 - 1.9e-07 30.2 29.0 7.3e-07 28.3 29.0 1.7 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel UPF0242 PF06785.11 ORF18569 - 0.37 10.9 12.4 0.067 13.3 6.9 2.4 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Syndecan PF01034.20 ORF18569 - 0.45 10.5 0.0 0.45 10.5 0.0 3.4 4 1 0 4 4 4 0 Syndecan domain Wzy_C PF04932.15 ORF18569 - 0.9 9.2 10.2 3.3 7.3 0.0 2.9 2 1 1 3 3 3 0 O-Antigen ligase TMEM52 PF14979.6 ORF18569 - 2 8.3 11.1 1.5 8.7 0.3 2.7 2 0 0 2 2 2 0 Transmembrane 52 UPF0139 PF03669.13 ORF18569 - 5.3 7.0 11.5 0.38 10.7 3.9 2.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) EMP24_GP25L PF01105.24 ORF18569 - 8.2 6.3 15.3 0.24 11.3 7.6 2.3 3 0 0 3 3 3 0 emp24/gp25L/p24 family/GOLD Oxidored_molyb PF00174.19 ORF147438 - 6.7e-37 126.7 0.0 1.7e-36 125.5 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 ORF147438 - 1.2e-18 67.5 0.1 2.3e-18 66.6 0.1 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain Cyt-b5 PF00173.28 ORF147438 - 0.029 14.5 0.1 0.081 13.1 0.0 1.8 2 0 0 2 2 2 0 Cytochrome b5-like Heme/Steroid binding domain Somatostatin PF03002.15 ORF142893 - 0.096 12.6 1.3 0.29 11.1 1.3 1.8 1 0 0 1 1 1 0 Somatostatin/Cortistatin family Asp PF00026.23 ORF139749 - 2.1e-21 76.7 0.2 2.9e-21 76.2 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF139749 - 0.043 13.6 0.0 0.087 12.6 0.0 1.5 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal Peptidase_M3 PF01432.20 ORF115021 - 6.4e-154 513.6 0.0 7.3e-154 513.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 Transglut_core2 PF13369.6 ORF115021 - 0.2 11.2 0.0 1 8.9 0.0 2.0 2 0 0 2 2 2 0 Transglutaminase-like superfamily tRNA-synt_2 PF00152.20 ORF112812 - 1e-81 274.4 0.0 1.2e-81 274.2 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 ORF112812 - 8.8e-12 44.8 0.0 2.3e-11 43.5 0.0 1.7 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 ORF112812 - 2.6e-07 30.4 0.0 0.00034 20.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Sugar_tr PF00083.24 ORF107559 - 0.003 16.5 0.6 0.0059 15.5 0.6 1.4 1 0 0 1 1 1 1 Sugar (and other) transporter SRR PF07709.11 ORF98631 - 1.1 9.9 3.9 6.8 7.5 0.0 3.5 4 0 0 4 4 4 0 Seven Residue Repeat Rtt106 PF08512.12 ORF82302 - 8.6e-23 80.6 0.1 1.7e-22 79.6 0.1 1.5 1 0 0 1 1 1 1 Histone chaperone Rttp106-like SSrecog PF03531.14 ORF82302 - 2.8e-17 62.4 0.0 1.3e-16 60.2 0.0 2.3 2 0 0 2 2 2 1 Structure-specific recognition protein (SSRP1) Carm_PH PF17888.1 ORF82302 - 0.15 12.5 0.3 2.5 8.5 0.3 2.6 2 0 0 2 2 2 0 Carmil pleckstrin homology domain BUD22 PF09073.10 ORF82302 - 0.7 9.2 31.8 0.29 10.4 16.6 2.2 2 0 0 2 2 2 0 BUD22 HNH PF01844.23 ORF6825 - 1e-09 38.4 0.0 1.9e-09 37.6 0.0 1.5 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 ORF6825 - 3.1e-05 23.8 0.5 6e-05 22.8 0.5 1.5 1 0 0 1 1 1 1 HNH endonuclease MGDG_synth PF06925.11 ORF62325 - 1.1e-27 97.2 0.1 1.6e-27 96.7 0.1 1.3 1 0 0 1 1 1 1 Monogalactosyldiacylglycerol (MGDG) synthase Glyco_tran_28_C PF04101.16 ORF62325 - 7.2e-14 52.1 1.6 1.4e-13 51.1 0.1 2.2 3 0 0 3 3 3 1 Glycosyltransferase family 28 C-terminal domain Glycos_transf_1 PF00534.20 ORF62325 - 9.5e-07 28.5 0.0 2.5e-06 27.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF62325 - 1.7e-06 28.5 0.1 3.9e-06 27.3 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 ORF62325 - 0.0015 17.5 0.0 0.073 11.9 0.0 2.4 2 1 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Glyco_transf_4 PF13439.6 ORF62325 - 0.0036 17.3 1.8 0.017 15.1 0.9 2.7 3 1 0 3 3 3 1 Glycosyltransferase Family 4 DUF2325 PF10087.9 ORF62325 - 1.2 9.3 4.5 64 3.8 0.1 3.8 3 1 1 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2325) C2 PF00168.30 ORF571 - 3.3e-26 91.6 0.0 1.4e-16 60.6 0.0 4.3 3 1 1 4 4 4 4 C2 domain Peptidase_M20 PF01546.28 ORF5051 - 5.1e-17 62.3 0.0 6.5e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF5051 - 1.5e-07 31.3 0.0 2.8e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain CLTH PF10607.9 ORF45699 - 0.014 15.3 0.5 0.36 10.7 0.1 2.5 2 0 0 2 2 2 0 CTLH/CRA C-terminal to LisH motif domain S1 PF00575.23 ORF39652 - 2.4e-31 107.9 4.8 2.7e-14 53.3 0.1 4.3 4 1 0 4 4 4 2 S1 RNA binding domain SAP PF02037.27 ORF39652 - 1.7e-13 50.0 1.0 2.8e-13 49.3 1.0 1.4 1 0 0 1 1 1 1 SAP domain DUF4537 PF15057.6 ORF39652 - 1.9e-10 40.8 0.9 0.00038 20.5 0.0 3.2 2 1 0 2 2 2 2 Domain of unknown function (DUF4537) DUF1325 PF07039.11 ORF39652 - 1.7e-08 34.6 0.3 0.0011 19.1 0.0 3.2 1 1 2 3 3 3 2 SGF29 tudor-like domain Agenet PF05641.12 ORF39652 - 1.2e-07 32.0 2.3 0.0011 19.4 0.2 3.6 3 0 0 3 3 3 1 Agenet domain TUDOR PF00567.24 ORF39652 - 2.3e-07 30.9 0.1 0.024 14.7 0.0 3.2 1 1 2 3 3 3 3 Tudor domain S1_2 PF13509.6 ORF39652 - 8.2e-06 25.8 2.4 1.6 8.8 0.0 5.2 4 2 1 5 5 5 1 S1 domain SMN PF06003.12 ORF39652 - 0.00033 20.0 2.0 0.55 9.5 0.1 3.0 1 1 2 3 3 3 2 Survival motor neuron protein (SMN) Tudor_2 PF18104.1 ORF39652 - 0.0022 17.7 0.8 0.088 12.5 0.0 3.2 3 0 0 3 3 3 1 Jumonji domain-containing protein 2A Tudor domain 53-BP1_Tudor PF09038.10 ORF39652 - 0.0047 16.9 0.1 15 5.5 0.0 3.2 3 0 0 3 3 3 0 Tumour suppressor p53-binding protein-1 Tudor Phage_gp53 PF11246.8 ORF39652 - 0.0059 16.3 0.4 0.039 13.6 0.1 2.0 1 1 1 2 2 2 1 Base plate wedge protein 53 Telomere_Sde2_2 PF13297.6 ORF39652 - 0.029 14.0 0.7 0.073 12.7 0.7 1.6 1 0 0 1 1 1 0 Telomere stability C-terminal PASTA PF03793.19 ORF39652 - 0.11 12.4 1.0 20 5.2 0.0 3.4 3 0 0 3 3 3 0 PASTA domain HeH PF12949.7 ORF39652 - 0.14 11.9 1.1 0.33 10.7 0.3 2.0 2 0 0 2 2 2 0 HeH/LEM domain DUF3221 PF11518.8 ORF39652 - 0.98 9.8 9.8 6.1 7.3 0.0 4.4 4 1 1 5 5 5 0 Protein of unknown function (DUF3221) LBR_tudor PF09465.10 ORF39652 - 1.2 8.9 5.4 2.1 8.2 0.5 3.0 2 1 1 3 3 3 0 Lamin-B receptor of TUDOR domain Peptidase_M20 PF01546.28 ORF37102 - 5.1e-17 62.3 0.0 6.5e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF37102 - 1.5e-07 31.3 0.0 2.8e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Ion_trans PF00520.31 ORF25494 - 3.6e-17 62.4 13.3 6e-17 61.7 13.3 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF25494 - 0.0019 18.0 0.5 0.0061 16.4 0.5 1.8 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF25494 - 0.0081 16.6 0.1 0.017 15.5 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_10 PF14788.6 ORF25494 - 0.14 12.1 0.1 0.37 10.7 0.1 1.7 1 0 0 1 1 1 0 EF hand FtsX PF02687.21 ORF25494 - 2.4 8.7 8.6 0.53 10.8 4.4 2.1 2 0 0 2 2 2 0 FtsX-like permease family TANGO2 PF05742.12 ORF20460 - 1.1e-32 114.1 0.3 1.1e-32 114.1 0.3 1.8 2 1 0 2 2 2 1 Transport and Golgi organisation 2 Apolipoprotein PF01442.18 ORF144162 - 0.021 14.7 0.1 0.091 12.6 0.3 1.8 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain Sec2p PF06428.11 ORF144162 - 0.039 13.9 1.2 0.1 12.6 1.2 1.6 1 0 0 1 1 1 0 GDP/GTP exchange factor Sec2p FAM76 PF16046.5 ORF144162 - 0.12 11.7 0.1 0.18 11.1 0.1 1.2 1 0 0 1 1 1 0 FAM76 protein RP-C_C PF11800.8 ORF144162 - 0.14 12.3 0.1 0.22 11.6 0.1 1.2 1 0 0 1 1 1 0 Replication protein C C-terminal region XLF PF09302.11 ORF144162 - 0.71 10.0 2.7 11 6.1 0.1 2.3 2 0 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Hydrolase PF00702.26 ORF137943 - 7.7e-27 95.0 1.1 1.1e-26 94.4 1.1 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 ORF137943 - 1.8e-12 47.1 1.8 1.8e-12 47.1 1.8 1.8 2 0 0 2 2 2 1 E1-E2 ATPase HAD PF12710.7 ORF137943 - 0.036 14.5 0.0 0.12 12.8 0.0 1.9 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF137943 - 0.057 13.2 0.1 0.12 12.1 0.1 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase RRM_2 PF04059.12 ORF108757 - 6e-20 71.3 0.0 9.3e-20 70.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 Wtap PF17098.5 ORF108757 - 0.009 16.0 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 WTAP/Mum2p family RRM_1 PF00076.22 ORF108757 - 0.03 14.2 0.0 0.056 13.3 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TSC22 PF01166.18 ORF108757 - 0.056 13.8 0.1 0.1 12.9 0.1 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family FtsJ PF01728.19 ORF99448 - 1.2e-48 165.6 0.2 2.6e-47 161.2 0.0 2.1 2 0 0 2 2 2 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 ORF99448 - 6.3e-06 26.1 0.1 2e-05 24.5 0.1 2.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF99448 - 0.021 15.5 0.1 0.12 13.1 0.0 2.4 2 1 0 2 2 2 0 Methyltransferase domain HTH_12 PF08461.10 ORF99448 - 0.091 12.7 2.4 0.26 11.2 0.4 2.8 2 1 0 2 2 2 0 Ribonuclease R winged-helix domain YtxH PF12732.7 ORF99448 - 5.2 7.7 7.1 40 4.9 0.5 3.2 2 1 0 2 2 2 0 YtxH-like protein Thioredoxin PF00085.20 ORF92062 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF92062 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF92062 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF92062 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF92062 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF92062 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF92062 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF92062 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF92062 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF92062 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF92062 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF92062 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin NYN PF01936.18 ORF80908 - 0.0026 18.3 0.0 0.0047 17.4 0.0 1.4 1 0 0 1 1 1 1 NYN domain Thioredoxin PF00085.20 ORF76767 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF76767 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF76767 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF76767 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF76767 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF76767 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF76767 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF76767 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF76767 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF76767 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF76767 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF76767 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin Thioredoxin PF00085.20 ORF75127 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF75127 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF75127 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF75127 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF75127 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF75127 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF75127 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF75127 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF75127 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF75127 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF75127 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF75127 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin TcpQ PF10671.9 ORF70694 - 0.031 14.4 0.1 0.066 13.3 0.1 1.5 1 0 0 1 1 1 0 Toxin co-regulated pilus biosynthesis protein Q Thioredoxin PF00085.20 ORF62443 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF62443 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF62443 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF62443 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF62443 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF62443 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF62443 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF62443 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF62443 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF62443 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF62443 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF62443 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin Peptidase_M48_N PF16491.5 ORF5954 - 1e-49 168.9 16.7 1e-49 168.9 16.7 1.8 2 0 0 2 2 2 1 CAAX prenyl protease N-terminal, five membrane helices Peptidase_M48 PF01435.18 ORF5954 - 2.1e-40 138.6 0.0 3.1e-40 138.1 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 ORF5954 - 0.00082 18.6 2.0 0.0024 17.1 2.0 1.8 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF2268 PF10026.9 ORF5954 - 0.028 14.0 0.0 0.054 13.1 0.0 1.4 1 0 0 1 1 1 0 Predicted Zn-dependent protease (DUF2268) DUF2973 PF11189.8 ORF5954 - 2.2 8.4 6.9 5.5 7.1 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2973) Peptidase_M18 PF02127.15 ORF48502 - 2.7e-146 487.8 0.1 3.2e-146 487.5 0.1 1.0 1 0 0 1 1 1 1 Aminopeptidase I zinc metalloprotease (M18) Peptidase_M42 PF05343.14 ORF48502 - 0.00011 21.3 1.1 0.0096 15.0 0.1 2.2 2 0 0 2 2 2 2 M42 glutamyl aminopeptidase Sushi_2 PF09014.10 ORF48502 - 0.092 12.6 1.0 0.2 11.6 1.0 1.5 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain p450 PF00067.22 ORF46877 - 7.6e-60 203.0 0.0 9.3e-60 202.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 MFS_1 PF07690.16 ORF39291 - 6.6e-35 120.7 35.2 6.1e-30 104.3 27.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF39291 - 4.5e-05 22.9 11.8 0.00041 19.8 4.5 2.2 2 0 0 2 2 2 2 Uncharacterised MFS-type transporter YbfB Sugar_tr PF00083.24 ORF39291 - 0.003 16.5 33.2 0.78 8.5 32.0 3.3 1 1 0 1 1 1 1 Sugar (and other) transporter FPN1 PF06963.12 ORF39291 - 0.02 13.5 1.5 0.46 9.0 3.5 2.1 2 0 0 2 2 2 0 Ferroportin1 (FPN1) Thioredoxin PF00085.20 ORF31876 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF31876 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF31876 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF31876 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF31876 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF31876 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF31876 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF31876 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF31876 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF31876 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF31876 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF31876 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin Thioredoxin PF00085.20 ORF31864 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF31864 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF31864 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF31864 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF31864 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF31864 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF31864 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF31864 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF31864 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF31864 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF31864 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF31864 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin MFS_1 PF07690.16 ORF29520 - 1.2e-13 50.8 12.9 3.9e-10 39.2 2.3 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF29520 - 1.6e-12 47.1 13.1 3.2e-12 46.1 13.1 1.6 1 1 0 1 1 1 1 Sugar (and other) transporter Apolipoprotein PF01442.18 ORF1909 - 1.8e-13 50.8 41.6 0.0014 18.5 13.8 6.2 1 1 2 3 3 3 3 Apolipoprotein A1/A4/E domain DUF5324 PF17258.2 ORF1909 - 6.4e-07 29.3 99.2 0.019 14.6 20.4 5.6 1 1 4 6 6 6 6 Family of unknown function (DUF5324) DUF883 PF05957.13 ORF1909 - 0.00032 21.2 54.0 0.12 13.0 5.4 8.5 1 1 4 6 6 6 2 Bacterial protein of unknown function (DUF883) DUF5318 PF17249.2 ORF1909 - 0.0012 18.7 30.2 2.2 8.0 0.2 9.7 1 1 12 14 14 14 3 Family of unknown function (DUF5318) Phasin_2 PF09361.10 ORF1909 - 0.18 12.1 51.1 3.1 8.1 8.8 6.5 1 1 4 5 5 5 0 Phasin protein Prefoldin PF02996.17 ORF1909 - 0.21 11.5 9.9 53 3.8 0.0 6.1 7 0 0 7 7 7 0 Prefoldin subunit FAM163 PF15069.6 ORF1909 - 0.4 11.1 5.7 0.097 13.1 0.4 2.6 2 1 1 3 3 3 0 FAM163 family Pacs-1 PF10254.9 ORF1909 - 2 7.3 15.9 9 5.1 0.6 3.6 1 1 3 4 4 4 0 PACS-1 cytosolic sorting protein PPDK_N PF01326.19 ORF16251 - 3.4e-32 112.0 0.0 5.5e-32 111.3 0.0 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ubiquitin PF00240.23 ORF146702 - 0.0051 16.5 4.0 0.7 9.7 0.0 4.3 5 1 0 5 5 5 1 Ubiquitin family Presenilin PF01080.17 ORF146702 - 0.13 11.0 10.9 0.19 10.5 10.9 1.1 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 ORF146702 - 0.2 10.4 16.0 0.35 9.6 16.0 1.4 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Zip PF02535.22 ORF146702 - 0.3 10.3 8.1 0.41 9.8 8.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Menin PF05053.13 ORF146702 - 0.4 9.0 9.1 0.56 8.5 9.1 1.1 1 0 0 1 1 1 0 Menin DUF913 PF06025.12 ORF146702 - 0.69 8.8 7.1 1 8.2 7.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Paramyxo_ncap PF00973.19 ORF146702 - 0.75 8.6 7.3 1 8.2 7.3 1.2 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Neur_chan_memb PF02932.16 ORF146702 - 1.3 9.0 4.6 2 8.4 4.6 1.4 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Radial_spoke PF04712.12 ORF141672 - 3.2e-86 290.2 7.1 1.2e-59 202.6 4.6 2.0 1 1 1 2 2 2 2 Radial spokehead-like protein Thioredoxin PF00085.20 ORF132857 - 4e-63 209.8 0.3 4.3e-33 113.4 0.1 2.9 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 ORF132857 - 4.6e-34 117.9 3.7 1.4e-22 80.6 0.0 3.7 3 1 2 5 5 5 3 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF132857 - 2.8e-11 43.8 7.0 5.3e-06 26.8 0.2 4.8 4 3 0 4 4 4 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF132857 - 3.4e-10 40.1 0.1 0.005 17.1 0.0 5.1 5 2 1 6 6 6 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF132857 - 2e-07 31.0 0.0 0.019 14.9 0.0 2.8 3 0 0 3 3 3 2 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF132857 - 2.2e-07 30.9 0.0 0.037 14.2 0.0 3.6 3 0 0 3 3 3 2 Thioredoxin-like OST3_OST6 PF04756.13 ORF132857 - 2.2e-06 27.3 0.0 0.00011 21.7 0.0 2.3 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 ORF132857 - 0.0014 18.6 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin domain Redoxin PF08534.10 ORF132857 - 0.002 17.9 0.2 1.3 8.7 0.0 2.8 3 0 0 3 3 3 2 Redoxin DUF3000 PF11452.8 ORF132857 - 0.043 13.3 0.0 0.62 9.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) Thioredoxin_9 PF14595.6 ORF132857 - 0.13 12.0 0.1 7.1 6.4 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_4 PF13462.6 ORF132857 - 0.17 12.0 1.5 23 5.1 0.1 3.1 3 0 0 3 3 3 0 Thioredoxin OmpA PF00691.20 ORF128051 - 0.0026 18.1 0.1 0.013 15.9 0.0 2.2 2 0 0 2 2 2 1 OmpA family DUF1664 PF07889.12 ORF128051 - 0.0076 16.3 13.4 0.0083 16.2 4.2 3.7 1 1 3 4 4 4 1 Protein of unknown function (DUF1664) DUF2730 PF10805.8 ORF128051 - 0.74 9.9 4.0 0.66 10.1 0.1 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2730) Fib_alpha PF08702.10 ORF128051 - 1.7 8.8 14.0 1.3 9.2 6.3 3.2 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family DDE_Tnp_1 PF01609.21 ORF127247 - 1.2e-26 93.7 0.0 2.1e-26 92.9 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain HEPN_DZIP3 PF18738.1 ORF127247 - 0.06 13.1 0.0 0.15 11.8 0.0 1.7 1 0 0 1 1 1 0 DZIP3/ hRUL138-like HEPN Dimerisation PF08100.11 ORF127247 - 0.11 12.5 0.2 0.57 10.2 0.0 2.3 2 0 0 2 2 2 0 Dimerisation domain MFS_1 PF07690.16 ORF125963 - 4.8e-26 91.5 24.4 6.6e-14 51.6 4.2 2.1 2 0 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF125963 - 1.1e-05 24.5 22.4 0.00024 20.1 2.5 2.8 2 1 0 2 2 2 2 Sugar (and other) transporter Myb_DNA-binding PF00249.31 ORF113747 - 4.5e-17 62.0 15.6 0.0004 20.5 0.2 5.4 5 0 0 5 5 5 4 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF113747 - 2.1e-14 53.5 13.6 1.3e-07 31.7 2.4 5.0 2 2 3 5 5 5 4 Myb-like DNA-binding domain Myb_DNA-bind_2 PF08914.11 ORF113747 - 0.0061 16.7 1.9 0.091 12.9 0.0 3.2 3 0 0 3 3 3 1 Rap1 Myb domain Myb_DNA-bind_4 PF13837.6 ORF113747 - 0.075 13.4 9.7 0.87 10.0 2.5 4.2 3 1 1 4 4 4 0 Myb/SANT-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF113747 - 1.3 9.0 8.9 4.8 7.1 0.0 4.1 5 0 0 5 5 5 0 Myb DNA-binding like CtaG_Cox11 PF04442.14 ORF109207 - 1.3e-44 151.9 0.5 2.8e-44 150.8 0.5 1.6 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 MutL_C PF08676.11 ORF109207 - 0.072 12.8 1.2 0.14 12.0 1.2 1.4 1 0 0 1 1 1 0 MutL C terminal dimerisation domain Chloroa_b-bind PF00504.21 ORF109151 - 1.7e-78 262.7 0.1 3.8e-32 112.1 0.0 3.1 3 0 0 3 3 3 3 Chlorophyll A-B binding protein DUF1304 PF06993.12 ORF109151 - 0.011 15.7 0.2 27 4.8 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1304) BtrH_N PF14399.6 ORF109151 - 0.069 13.4 0.0 34 4.7 0.0 3.4 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal DUF2678 PF10856.8 ORF109151 - 0.081 12.9 0.0 13 5.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2678) MitoNEET_N PF10660.9 ORF109151 - 0.73 9.9 1.9 39 4.4 0.0 3.1 4 0 0 4 4 4 0 Iron-containing outer mitochondrial membrane protein N-terminus Piezo_RRas_bdg PF12166.8 ORF99755 - 3.5e-89 300.0 2.4 4.1e-89 299.8 2.4 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF5499 PF17603.2 ORF99755 - 0.0025 18.4 0.0 0.0069 17.0 0.0 1.7 1 0 0 1 1 1 1 Family of unknown function (DUF5499) DUF1422 PF07226.11 ORF99755 - 0.16 12.0 2.4 3.3 7.7 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1422) ADIP PF11559.8 ORF9783 - 0.018 15.1 12.7 0.018 15.1 12.7 3.5 2 2 2 4 4 4 0 Afadin- and alpha -actinin-Binding ClpB_D2-small PF10431.9 ORF9783 - 0.039 14.0 1.7 0.12 12.5 1.7 1.8 1 0 0 1 1 1 0 C-terminal, D2-small domain, of ClpB protein DASH_Hsk3 PF08227.11 ORF9783 - 0.095 13.1 1.8 3.2 8.2 0.6 2.9 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like Dabb PF07876.12 ORF9783 - 0.32 11.7 3.0 1.3 9.7 0.0 3.2 2 1 1 3 3 3 0 Stress responsive A/B Barrel Domain Histone_HNS PF00816.21 ORF9783 - 0.35 11.7 0.1 0.35 11.7 0.1 4.2 3 1 2 5 5 5 0 H-NS histone family Spc7 PF08317.11 ORF9783 - 0.75 8.6 38.5 0.018 14.0 12.1 2.8 2 1 1 3 3 3 0 Spc7 kinetochore protein Matrilin_ccoil PF10393.9 ORF9783 - 1 9.2 7.7 1.7 8.6 0.2 3.0 3 0 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin DUF1664 PF07889.12 ORF9783 - 2.8 8.0 15.5 0.66 10.0 3.9 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Phage_terminase PF10668.9 ORF9783 - 3.2 7.8 7.7 0.68 10.0 0.1 3.4 4 0 0 4 4 4 0 Phage terminase small subunit ABC_tran PF00005.27 ORF87863 - 7e-11 42.8 0.0 1e-09 39.1 0.0 2.1 2 0 0 2 2 2 1 ABC transporter PARP PF00644.20 ORF87863 - 7.5e-06 25.7 0.0 1.2e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain AAA_21 PF13304.6 ORF87863 - 0.0011 18.9 0.0 0.0017 18.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Peptidase_M16_C PF05193.21 ORF87303 - 4.4e-15 56.2 0.0 7.7e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16_M PF16187.5 ORF87303 - 5.4e-12 45.6 0.6 5.4e-12 45.6 0.6 1.6 2 0 0 2 2 2 1 Middle or third domain of peptidase_M16 CI-B14_5a PF07347.12 ORF87303 - 0.039 13.8 0.0 0.12 12.3 0.0 1.8 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) ALIX_LYPXL_bnd PF13949.6 ORF87303 - 0.48 9.7 2.3 0.64 9.3 0.3 1.9 2 0 0 2 2 2 0 ALIX V-shaped domain binding to HIV IRS PF02174.17 ORF8417 - 0.053 13.4 0.4 0.12 12.2 0.4 1.5 1 0 0 1 1 1 0 PTB domain (IRS-1 type) GntP_permease PF02447.16 ORF80622 - 1.2e-165 551.6 47.5 1.4e-165 551.3 47.5 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 ORF80622 - 2.2e-12 46.8 55.2 2.2e-12 46.8 55.2 2.3 1 1 1 2 2 2 1 Citrate transporter Na_H_antiport_2 PF13726.6 ORF80622 - 0.012 15.7 4.4 0.012 15.7 4.4 3.8 3 1 1 4 4 4 0 Na+-H+ antiporter family DUF4448 PF14610.6 ORF71929 - 0.05 13.4 0.3 0.23 11.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4448) EphA2_TM PF14575.6 ORF71929 - 0.052 14.4 7.1 25 5.8 0.4 4.6 3 1 1 4 4 4 0 Ephrin type-A receptor 2 transmembrane domain Pecanex_C PF05041.15 ORF71929 - 0.078 12.5 1.0 0.2 11.2 1.0 1.6 1 0 0 1 1 1 0 Pecanex protein (C-terminus) DUF5305 PF17231.2 ORF71929 - 0.092 12.1 0.0 0.092 12.1 0.0 3.2 3 2 0 3 3 3 0 Family of unknown function (DUF5305) DUF2207 PF09972.9 ORF71929 - 0.14 10.9 0.1 0.14 10.9 0.1 4.2 2 2 2 4 4 4 0 Predicted membrane protein (DUF2207) SIT PF15330.6 ORF71929 - 0.42 11.1 0.0 0.42 11.1 0.0 4.1 4 0 0 4 4 4 0 SHP2-interacting transmembrane adaptor protein, SIT zf-LITAF-like PF10601.9 ORF71929 - 0.89 9.9 3.4 18 5.7 0.3 3.4 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain Vpu PF00558.19 ORF71929 - 2.7 7.8 0.0 2.7 7.8 0.0 3.4 3 1 0 3 3 3 0 Vpu protein MatE PF01554.18 ORF60678 - 8.5e-24 84.0 31.7 1.4e-18 67.0 2.2 2.8 2 1 0 2 2 2 2 MatE Pkinase PF00069.25 ORF57935 - 3.7e-67 226.5 1.5 7.6e-67 225.4 0.2 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57935 - 8.1e-42 143.3 0.1 1.3e-41 142.6 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF57935 - 1.3e-15 57.6 12.7 2.2e-10 40.8 1.3 3.3 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF57935 - 8e-14 51.2 15.2 9.2e-07 28.6 0.5 4.5 3 2 2 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF57935 - 3.5e-13 48.1 18.4 0.00015 21.0 1.0 4.6 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF57935 - 1.2e-10 40.4 14.4 0.0006 19.5 0.4 4.7 4 0 0 4 4 4 3 EF-hand domain Kinase-like PF14531.6 ORF57935 - 1.9e-08 34.0 0.0 8.5e-07 28.6 0.0 2.4 1 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF57935 - 3.6e-06 26.2 0.1 6.7e-06 25.3 0.1 1.5 1 0 0 1 1 1 1 Haspin like kinase domain EF-hand_5 PF13202.6 ORF57935 - 5.4e-06 25.7 11.8 0.00012 21.4 0.9 3.4 3 0 0 3 3 3 2 EF hand Pkinase_fungal PF17667.1 ORF57935 - 2.2e-05 23.4 0.1 8.5e-05 21.5 0.0 1.6 1 1 1 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF57935 - 2.8e-05 23.6 0.1 5.4e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF57935 - 0.0014 18.6 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_4 PF12763.7 ORF57935 - 0.0035 17.3 3.3 1 9.4 0.1 2.9 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand CDC4_D PF16856.5 ORF57935 - 0.04 13.8 0.1 0.15 12.0 0.1 2.0 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain Spuma_A9PTase PF03539.14 ORF57935 - 0.075 13.2 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Spumavirus aspartic protease (A9) MatE PF01554.18 ORF54009 - 4e-20 72.1 29.9 1.2e-17 64.1 2.8 3.2 3 1 0 3 3 3 2 MatE Piezo_RRas_bdg PF12166.8 ORF23089 - 1.7e-89 301.1 3.5 2e-89 300.8 3.5 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF5499 PF17603.2 ORF23089 - 0.0026 18.3 0.0 0.0069 17.0 0.0 1.7 1 0 0 1 1 1 1 Family of unknown function (DUF5499) TrbM PF07424.11 ORF23089 - 0.024 14.6 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 TrbM DUF1422 PF07226.11 ORF23089 - 0.16 12.0 2.4 3.3 7.7 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1422) Peptidase_M14 PF00246.24 ORF18550 - 1.7e-10 41.2 0.0 3.4e-10 40.2 0.0 1.4 1 0 0 1 1 1 1 Zinc carboxypeptidase Pkinase PF00069.25 ORF18474 - 3.7e-67 226.5 1.5 7.6e-67 225.4 0.2 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18474 - 8.1e-42 143.3 0.1 1.3e-41 142.6 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF18474 - 1.5e-15 57.4 13.3 2.2e-10 40.8 1.3 3.2 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF18474 - 2.4e-13 49.7 16.0 9.2e-07 28.6 0.5 4.5 3 2 2 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF18474 - 4.3e-13 47.8 19.8 0.00015 21.0 1.0 4.6 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF18474 - 5.6e-11 41.5 16.0 0.0006 19.5 0.4 4.7 4 0 0 4 4 4 3 EF-hand domain Kinase-like PF14531.6 ORF18474 - 2e-08 33.9 0.0 8.5e-07 28.6 0.0 2.4 1 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF18474 - 3.6e-06 26.2 0.1 6.7e-06 25.3 0.1 1.5 1 0 0 1 1 1 1 Haspin like kinase domain EF-hand_5 PF13202.6 ORF18474 - 5.3e-06 25.7 11.8 0.00012 21.4 0.9 3.4 3 0 0 3 3 3 2 EF hand Pkinase_fungal PF17667.1 ORF18474 - 2.2e-05 23.4 0.1 8.5e-05 21.5 0.0 1.6 1 1 1 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF18474 - 2.8e-05 23.6 0.1 5.4e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF18474 - 0.0014 18.6 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_4 PF12763.7 ORF18474 - 0.038 13.9 3.6 4.5 7.3 0.5 2.9 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand CDC4_D PF16856.5 ORF18474 - 0.04 13.8 0.1 0.15 12.0 0.1 2.0 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain Spuma_A9PTase PF03539.14 ORF18474 - 0.075 13.2 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Spumavirus aspartic protease (A9) FYVE PF01363.21 ORF1687 - 2.5e-17 62.7 12.9 5.4e-17 61.7 12.9 1.6 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF1687 - 0.0065 16.7 8.5 0.0065 16.7 8.5 2.1 2 0 0 2 2 2 1 FYVE-type zinc finger Zf_RING PF16744.5 ORF1687 - 7.1 6.8 10.0 27 5.0 10.1 1.9 1 1 0 1 1 1 0 KIAA1045 RING finger Hat1_N PF10394.9 ORF15323 - 6.1e-08 33.1 1.2 6.1e-08 33.1 1.2 1.9 2 0 0 2 2 2 1 Histone acetyl transferase HAT1 N-terminus MOZ_SAS PF01853.18 ORF15323 - 0.00021 21.0 1.4 0.00041 20.0 1.4 1.5 1 0 0 1 1 1 1 MOZ/SAS family Acetyltransf_1 PF00583.25 ORF15323 - 0.00031 21.0 0.0 0.00086 19.5 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF15323 - 0.0075 16.2 0.0 0.043 13.8 0.0 2.1 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Pkinase PF00069.25 ORF150356 - 3.7e-67 226.5 1.5 7.6e-67 225.4 0.2 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF150356 - 8.1e-42 143.3 0.1 1.3e-41 142.6 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF150356 - 1.5e-15 57.4 13.3 2.2e-10 40.8 1.3 3.2 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF150356 - 2.4e-13 49.7 16.0 9.2e-07 28.6 0.5 4.5 3 2 2 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF150356 - 4.3e-13 47.8 19.8 0.00015 21.0 1.0 4.6 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF150356 - 5.6e-11 41.5 16.0 0.0006 19.5 0.4 4.7 4 0 0 4 4 4 3 EF-hand domain Kinase-like PF14531.6 ORF150356 - 2e-08 33.9 0.0 8.5e-07 28.6 0.0 2.4 1 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF150356 - 3.6e-06 26.2 0.1 6.7e-06 25.3 0.1 1.5 1 0 0 1 1 1 1 Haspin like kinase domain EF-hand_5 PF13202.6 ORF150356 - 5.3e-06 25.7 11.8 0.00012 21.4 0.9 3.4 3 0 0 3 3 3 2 EF hand Pkinase_fungal PF17667.1 ORF150356 - 2.2e-05 23.4 0.1 8.5e-05 21.5 0.0 1.6 1 1 1 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF150356 - 2.8e-05 23.6 0.1 5.4e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF150356 - 0.0014 18.6 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_4 PF12763.7 ORF150356 - 0.038 13.9 3.6 4.5 7.3 0.5 2.9 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand CDC4_D PF16856.5 ORF150356 - 0.04 13.8 0.1 0.15 12.0 0.1 2.0 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain Spuma_A9PTase PF03539.14 ORF150356 - 0.075 13.2 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Spumavirus aspartic protease (A9) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks23.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks23.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks23.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks23.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Metallothio_5 PF02067.15 ORF146410 - 3.5 7.8 17.0 0.23 11.6 11.2 2.0 2 0 0 2 2 2 0 Metallothionein family 5 DUF4552 PF15089.6 ORF145092 - 0.01 15.0 5.8 0.012 14.7 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) Ank_2 PF12796.7 ORF143727 - 3.6e-12 46.7 0.0 4.5e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF143727 - 2.9e-11 43.4 0.1 4.7e-05 23.6 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF143727 - 1.1e-08 35.5 0.0 0.0012 19.3 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF143727 - 1e-06 28.9 0.0 0.046 14.2 0.1 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 ORF143727 - 2.5e-05 24.3 0.0 0.06 13.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat 12TM_1 PF09847.9 ORF143468 - 0.0069 15.5 10.4 0.008 15.3 10.4 1.0 1 0 0 1 1 1 1 Membrane protein of 12 TMs DUF423 PF04241.15 ORF142687 - 0.16 12.2 4.5 0.52 10.5 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF423) IL4 PF00727.18 ORF142350 - 0.12 12.6 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Interleukin 4 DUF2530 PF10745.9 ORF142177 - 0.19 12.0 1.1 0.33 11.2 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) CBFD_NFYB_HMF PF00808.23 ORF142062 - 3.3e-14 52.9 0.1 7.1e-14 51.8 0.0 1.6 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF142062 - 0.00097 19.5 0.0 0.0013 19.1 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 LCE6A PF15858.5 ORF141987 - 0.03 15.1 0.3 0.03 15.1 0.3 1.4 2 0 0 2 2 2 0 Late cornified envelope protein 6A family CBFD_NFYB_HMF PF00808.23 ORF141919 - 2.5e-14 53.3 0.0 4.6e-14 52.5 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF141919 - 0.00079 19.8 0.0 0.001 19.4 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID_20kDa PF03847.13 ORF141919 - 0.027 15.0 0.4 0.053 14.0 0.1 1.6 2 0 0 2 2 2 0 Transcription initiation factor TFIID subunit A CENP-T_C PF15511.6 ORF141919 - 0.046 13.9 0.0 0.055 13.6 0.0 1.3 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold CxC4 PF18717.1 ORF14094 - 0.1 12.5 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 CxC4 like cysteine cluster associated with KDZ transposases SDH_beta PF03315.15 ORF140663 - 0.022 15.1 1.0 0.032 14.6 0.9 1.3 1 1 0 1 1 1 0 Serine dehydratase beta chain SEO_N PF14576.6 ORF139608 - 0.043 13.0 0.0 0.06 12.5 0.0 1.2 1 0 0 1 1 1 0 Sieve element occlusion N-terminus TPR_11 PF13414.6 ORF139001 - 0.0079 15.9 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 TPR repeat FLYWCH_u PF16662.5 ORF138910 - 0.051 13.6 0.2 0.12 12.4 0.2 1.6 1 0 0 1 1 1 0 FLYWCH-type zinc finger-containing protein 1 DUF2318 PF10080.9 ORF136689 - 0.062 13.4 0.0 0.085 13.0 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) zf-Mss51 PF13824.6 ORF134745 - 0.03 14.4 1.0 0.062 13.4 1.0 1.6 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 SRC-1 PF08832.10 ORF134745 - 0.13 13.3 0.2 0.18 12.9 0.2 1.1 1 0 0 1 1 1 0 Steroid receptor coactivator Ras PF00071.22 ORF134420 - 5.3e-06 26.1 0.0 7.7e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 Ras family Bac_DNA_binding PF00216.21 ORF134147 - 4.5e-11 42.8 2.2 6.8e-11 42.2 2.2 1.3 1 0 0 1 1 1 1 Bacterial DNA-binding protein GUN4_N PF16416.5 ORF134147 - 0.075 13.0 0.4 0.12 12.4 0.4 1.3 1 0 0 1 1 1 0 ARM-like repeat domain, GUN4-N terminal DUF2756 PF10956.8 ORF134147 - 0.076 13.5 0.1 0.19 12.3 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2756) Ribosomal_L22e PF01776.17 ORF133716 - 0.007 16.7 0.0 0.33 11.4 0.0 2.1 1 1 1 2 2 2 2 Ribosomal L22e protein family EF-hand_1 PF00036.32 ORF133699 - 1.1e-16 59.1 6.3 1.7e-09 36.5 1.2 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF133699 - 1.6e-14 52.5 4.6 9.6e-09 34.5 0.5 3.2 1 1 2 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF133699 - 8e-13 48.6 2.6 1.1e-12 48.2 2.6 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF133699 - 4.1e-07 29.2 9.3 1.7e-06 27.2 0.9 3.1 2 1 1 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF133699 - 5.8e-07 29.3 5.1 0.0016 18.2 0.6 2.6 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF133699 - 0.00011 22.5 0.1 0.00014 22.2 0.1 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF133699 - 0.00022 21.5 0.1 0.00029 21.1 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain UPF0154 PF03672.13 ORF133699 - 0.0017 18.4 0.4 0.0017 18.4 0.4 2.0 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0154) AAA PF00004.29 ORF133699 - 0.0025 18.2 0.1 0.0028 18.1 0.1 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Caleosin PF05042.13 ORF133699 - 0.038 13.9 3.0 0.22 11.4 0.2 2.0 1 1 1 2 2 2 0 Caleosin related protein DUF3879 PF12995.7 ORF133699 - 0.043 13.5 2.0 1.5 8.5 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function, E. rectale Gene description (DUF3879) Dockerin_1 PF00404.18 ORF133699 - 0.092 13.0 0.7 0.64 10.3 0.8 2.2 1 1 1 2 2 2 0 Dockerin type I domain MORN PF02493.20 ORF133588 - 1.1e-15 56.4 11.0 8.1e-06 25.4 2.1 3.9 4 0 0 4 4 4 3 MORN repeat FRB_dom PF08771.11 ORF131604 - 0.11 12.9 0.6 0.14 12.6 0.6 1.2 1 0 0 1 1 1 0 FKBP12-rapamycin binding domain Regulator_TrmB PF11495.8 ORF131573 - 0.028 13.6 0.2 0.029 13.6 0.2 1.1 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB HEAT PF02985.22 ORF131524 - 0.00015 21.7 0.5 0.00037 20.5 0.0 1.9 2 0 0 2 2 2 1 HEAT repeat HEAT_2 PF13646.6 ORF131524 - 0.0003 21.1 1.6 0.0004 20.7 1.6 1.2 1 0 0 1 1 1 1 HEAT repeats HEAT_EZ PF13513.6 ORF131524 - 0.00058 20.3 2.5 0.00094 19.6 2.5 1.4 1 0 0 1 1 1 1 HEAT-like repeat HrpB1_HrpK PF09613.10 ORF131524 - 0.0051 16.4 0.2 0.0053 16.4 0.2 1.2 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB1_HrpK) Nitr_red_bet_C PF14711.6 ORF131524 - 0.007 16.0 0.3 0.0096 15.6 0.3 1.3 1 0 0 1 1 1 1 Respiratory nitrate reductase beta C-terminal Vac14_Fab1_bd PF12755.7 ORF131524 - 0.017 15.7 0.0 0.02 15.5 0.0 1.1 1 0 0 1 1 1 0 Vacuolar 14 Fab1-binding region DUF4072 PF13284.6 ORF131524 - 1.6 9.3 8.9 4.6 7.8 5.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4072) Oxidored_q2 PF00420.24 ORF131152 - 0.17 11.5 10.4 2.8 7.6 10.5 2.1 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DHHC PF01529.20 ORF131152 - 6 7.0 15.7 8.4 6.5 15.7 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase PemK_toxin PF02452.17 ORF13104 - 1.7e-22 79.9 0.0 1.9e-22 79.7 0.0 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system Claudin_2 PF13903.6 ORF130323 - 0.029 14.1 0.3 1.4 8.7 0.1 2.0 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction UPF0154 PF03672.13 ORF129739 - 0.011 15.8 2.2 0.012 15.7 0.7 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0154) DUF4508 PF14969.6 ORF12755 - 0.028 14.7 0.3 0.039 14.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) DUF3551 PF12071.8 ORF12709 - 0.43 10.7 4.8 0.15 12.2 2.2 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3551) DMP12 PF16779.5 ORF126840 - 0.0088 16.0 0.0 0.0097 15.9 0.0 1.1 1 0 0 1 1 1 1 DNA-mimic protein DUF4211 PF13926.6 ORF125722 - 1.2 9.2 4.1 2.1 8.4 4.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4211) DUF4271 PF14093.6 ORF124659 - 0.017 15.0 3.1 0.02 14.8 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) Sdh_cyt PF01127.22 ORF124659 - 0.025 14.6 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HJURP_mid PF12346.8 ORF123173 - 0.016 15.6 0.5 0.03 14.8 0.5 1.5 1 1 0 1 1 1 0 Holliday junction recognition protein-associated repeat Cyclin PF08613.11 ORF122227 - 1.5e-13 51.4 0.5 1.8e-13 51.1 0.5 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF122227 - 0.0004 20.1 0.1 0.00049 19.8 0.1 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain Metallothio_5 PF02067.15 ORF122189 - 3.5 7.8 17.0 0.23 11.6 11.2 2.0 2 0 0 2 2 2 0 Metallothionein family 5 Birna_VP5 PF03042.14 ORF121655 - 0.0035 17.4 0.7 0.0046 17.0 0.7 1.2 1 0 0 1 1 1 1 Birnavirus VP5 protein DUF1966 PF09260.11 ORF11947 - 4.3e-08 33.3 0.3 5.5e-08 33.0 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1966) DUF4458 PF14660.6 ORF11947 - 0.087 13.1 0.1 0.094 13.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4458) Alk_phosphatase PF00245.20 ORF118201 - 0.045 12.7 0.1 0.053 12.5 0.1 1.1 1 0 0 1 1 1 0 Alkaline phosphatase Cas_DxTHG PF09455.10 ORF117616 - 0.053 13.1 0.0 0.053 13.1 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family TPR_3 PF07720.12 ORF117036 - 0.22 11.5 0.1 0.35 10.9 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat SpoIIIAC PF06686.11 ORF115941 - 0.012 15.8 0.4 0.044 14.0 0.4 1.9 1 1 0 1 1 1 0 Stage III sporulation protein AC/AD protein family TSSC4 PF15264.6 ORF113879 - 1.1 9.5 4.1 1.8 8.9 4.1 1.3 1 0 0 1 1 1 0 Tumour suppressing sub-chromosomal transferable candidate 4 DUF1459 PF07312.11 ORF113134 - 0.13 12.5 3.6 0.26 11.5 3.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1459) DUF5083 PF16890.5 ORF112262 - 0.024 14.3 0.6 0.035 13.9 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5083) Phage_holin_3_6 PF07332.11 ORF110226 - 0.04 13.9 1.6 0.048 13.7 1.6 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Oxidored_q2 PF00420.24 ORF108889 - 0.17 11.5 10.4 2.8 7.6 10.5 2.1 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DHHC PF01529.20 ORF108889 - 6 7.0 15.7 8.4 6.5 15.7 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Acyltransf_C PF16076.5 ORF108591 - 0.18 11.9 0.4 0.59 10.3 0.2 2.0 1 1 1 2 2 2 0 Acyltransferase C-terminus DUF5385 PF17359.2 ORF107363 - 0.047 13.2 0.8 0.056 13.0 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Oxidored_q2 PF00420.24 ORF107091 - 0.17 11.5 10.4 2.8 7.6 10.5 2.1 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DHHC PF01529.20 ORF107091 - 6 7.0 15.7 8.4 6.5 15.7 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase SH3_4 PF06347.13 ORF106725 - 0.041 13.7 0.1 0.059 13.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial SH3 domain PcF PF09461.10 ORF106427 - 0.036 14.4 0.6 0.089 13.2 0.6 1.6 1 0 0 1 1 1 0 Phytotoxin PcF protein ERGIC_N PF13850.6 ORF105814 - 0.0075 16.6 1.0 0.01 16.2 1.0 1.3 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF5113 PF17140.4 ORF105441 - 0.075 12.8 0.4 0.1 12.4 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5113) AUX_IAA PF02309.16 ORF105000 - 0.12 12.2 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 AUX/IAA family DUF1801 PF08818.11 ORF104993 - 0.13 12.8 0.1 0.24 11.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DU1801) Fumarate_red_C PF02300.17 ORF104182 - 0.052 13.6 3.3 0.082 13.0 3.2 1.5 1 1 0 1 1 1 0 Fumarate reductase subunit C SieB PF14163.6 ORF103571 - 0.021 14.3 2.0 0.029 13.9 1.8 1.5 1 1 0 1 1 1 0 Super-infection exclusion protein B Cadherin_C_2 PF16492.5 ORF103571 - 0.034 14.9 0.7 0.057 14.2 0.7 1.3 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal Asp_decarbox PF02261.16 ORF103571 - 0.049 13.6 0.1 0.065 13.2 0.1 1.2 1 0 0 1 1 1 0 Aspartate decarboxylase DUF4834 PF16118.5 ORF103571 - 0.1 13.6 1.6 0.15 13.0 1.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Nodulin_late PF07127.11 ORF103571 - 0.17 12.2 3.8 0.092 13.1 1.7 1.6 1 1 0 1 1 1 0 Late nodulin protein EphA2_TM PF14575.6 ORF103571 - 0.33 11.9 1.8 0.58 11.1 1.8 1.5 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain WD40 PF00400.32 ORF102212 - 0.0015 19.3 0.0 0.12 13.2 0.0 2.2 2 0 0 2 2 2 1 WD domain, G-beta repeat HELP PF03451.14 ORF102212 - 0.0084 15.9 0.1 0.014 15.2 0.1 1.4 1 0 0 1 1 1 1 HELP motif eIF2A PF08662.11 ORF102212 - 0.014 15.2 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A FERM_M PF00373.18 ORF10166 - 0.88 10.0 5.7 4.1 7.8 5.7 1.9 1 1 0 1 1 1 0 FERM central domain Fer2 PF00111.27 ORF100904 - 5.1e-16 58.4 3.5 6.7e-16 58.0 3.5 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 ORF100904 - 0.00047 20.1 0.2 0.00097 19.1 0.1 1.6 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain DUF5556 PF17711.1 ORF100023 - 0.2 11.6 3.8 0.23 11.4 3.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5556) DUF3136 PF11334.8 NODE_53718_length_328_cov_1.276451_g45790_i0forward_frame_1 - 0.03 14.1 0.4 0.047 13.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) PRMT5 PF05185.16 NODE_53718_length_328_cov_1.276451_g45790_i0forward_frame_1 - 0.11 12.4 1.4 0.14 12.0 1.4 1.1 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase Crust_neurohorm PF01147.17 NODE_53712_length_328_cov_1.406143_g45784_i0reverse_frame_1 - 0.054 13.3 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family PBP1_TM PF14812.6 NODE_53711_length_328_cov_1.450512_g45783_i0forward_frame_1 - 0.14 12.5 0.1 0.22 11.9 0.1 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Arteri_GP4 PF02497.15 NODE_53710_length_328_cov_1.467577_g45782_i0reverse_frame_1 - 0.041 14.0 0.6 0.054 13.6 0.6 1.1 1 0 0 1 1 1 0 Arterivirus glycoprotein VPS9 PF02204.18 NODE_53710_length_328_cov_1.467577_g45782_i0forward_frame_1 - 0.022 15.0 0.1 0.04 14.1 0.1 1.4 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain DUF2417 PF10329.9 NODE_53707_length_328_cov_1.597270_g45779_i0forward_frame_1 - 0.082 12.3 8.3 0.11 11.9 8.3 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF4367 PF14285.6 NODE_53702_length_328_cov_1.747440_g45774_i0forward_frame_1 - 0.00087 19.7 0.6 0.0013 19.2 0.3 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4367) zf-RING_10 PF16685.5 NODE_53693_length_328_cov_1.883959_g45765_i0reverse_frame_1 - 0.0049 17.0 0.1 0.0065 16.6 0.1 1.1 1 0 0 1 1 1 1 zinc RING finger of MSL2 SIP1 PF04938.12 NODE_53691_length_328_cov_1.986348_g45763_i0forward_frame_1 - 0.048 13.4 0.1 0.054 13.2 0.1 1.1 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) DDOST_48kD PF03345.14 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_1 - 0.19 10.5 0.1 0.23 10.2 0.1 1.1 1 0 0 1 1 1 0 Oligosaccharyltransferase 48 kDa subunit beta CHZ PF09649.10 NODE_53678_length_328_cov_2.552901_g45750_i0forward_frame_1 - 0.12 11.9 1.0 3.2 7.3 1.3 2.5 2 1 0 2 2 2 0 Histone chaperone domain CHZ ABC_membrane PF00664.23 NODE_53674_length_328_cov_2.863481_g45746_i0reverse_frame_1 - 3.6e-05 23.5 2.0 3.8e-05 23.5 2.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Mcp5_PH PF12814.7 NODE_53674_length_328_cov_2.863481_g45746_i0reverse_frame_1 - 0.048 13.8 2.1 0.059 13.5 2.1 1.1 1 0 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology OSTMP1 PF09777.9 NODE_53674_length_328_cov_2.863481_g45746_i0reverse_frame_1 - 0.14 11.5 0.5 0.18 11.2 0.5 1.1 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor FAA_hydrolase_N PF09298.11 NODE_53670_length_328_cov_3.006826_g45742_i0forward_frame_1 - 0.073 13.3 0.3 0.089 13.0 0.3 1.2 1 0 0 1 1 1 0 Fumarylacetoacetase N-terminal PepSY_TM_like_2 PF16357.5 NODE_53670_length_328_cov_3.006826_g45742_i0forward_frame_1 - 0.092 12.7 0.2 0.12 12.3 0.2 1.1 1 0 0 1 1 1 0 Putative PepSY_TM-like YvrJ PF12841.7 NODE_53670_length_328_cov_3.006826_g45742_i0forward_frame_1 - 0.19 11.3 0.4 13 5.4 0.0 2.4 2 0 0 2 2 2 0 YvrJ protein family FGAR-AT_N PF18076.1 NODE_53669_length_328_cov_3.054608_g45741_i0reverse_frame_1 - 0.05 13.6 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase N-terminal BAT2_N PF07001.11 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_1 - 0.96 9.9 8.3 1.1 9.7 8.3 1.0 1 0 0 1 1 1 0 BAT2 N-terminus DUF406 PF04175.12 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_1 - 6.7 7.3 14.9 0.38 11.3 3.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF406) Sec62 PF03839.16 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_1 - 8.9 5.7 15.2 11 5.5 15.2 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Peptidase_M56 PF05569.11 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.0079 15.4 1.5 0.0089 15.3 1.5 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF2207 PF09972.9 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.0088 14.9 0.7 0.011 14.5 0.7 1.4 1 1 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF1676 PF07898.13 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.011 15.8 0.2 0.016 15.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF4400 PF14348.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.018 14.5 3.6 0.022 14.3 3.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) Amnionless PF14828.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.02 13.7 0.7 0.024 13.5 0.7 1.3 1 0 0 1 1 1 0 Amnionless Rax2 PF12768.7 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.039 13.4 3.9 0.049 13.1 3.9 1.1 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Conotoxin PF02950.17 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.072 14.1 0.1 0.072 14.1 0.1 3.4 2 1 0 2 2 1 0 Conotoxin BatD PF13584.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.09 11.6 2.7 0.043 12.6 1.2 1.3 1 1 0 1 1 1 0 Oxygen tolerance Shisa PF13908.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.2 11.9 2.3 0.21 11.8 1.2 1.4 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator DUF5383 PF17355.2 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 0.64 10.4 11.6 0.025 14.9 5.4 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5383) EVI2A PF05399.11 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 3 7.4 11.4 3.7 7.1 11.0 1.3 1 1 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) SR-25 PF10500.9 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 3.9 7.0 13.1 4.5 6.8 13.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DHHC PF01529.20 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 5.5 7.1 7.1 9.3 6.4 7.1 1.4 1 1 0 1 1 1 0 DHHC palmitoyltransferase DUF872 PF05915.12 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_1 - 7.8 6.7 7.5 18 5.5 7.5 1.7 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) EF-hand_11 PF08976.11 NODE_53657_length_328_cov_46.092150_g45729_i0reverse_frame_1 - 0.13 13.1 0.0 14 6.6 0.0 2.2 1 1 1 2 2 2 0 EF-hand domain Cadherin_tail PF15974.5 NODE_53655_length_328_cov_59.061433_g45727_i0reverse_frame_1 - 0.34 11.2 5.0 0.42 10.9 5.0 1.2 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region YibE_F PF07907.11 NODE_53655_length_328_cov_59.061433_g45727_i0forward_frame_1 - 1.4 8.4 14.5 1.5 8.2 14.5 1.1 1 0 0 1 1 1 0 YibE/F-like protein PRA1 PF03208.19 NODE_53655_length_328_cov_59.061433_g45727_i0forward_frame_1 - 6.3 6.4 11.6 2.3 7.8 9.3 1.5 1 1 0 1 1 1 0 PRA1 family protein Phtf-FEM1B_bdg PF12129.8 NODE_53655_length_328_cov_59.061433_g45727_i0forward_frame_1 - 8.6 6.2 8.1 11 5.8 8.1 1.2 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor WSK PF03832.13 NODE_53649_length_328_cov_68.419795_g45721_i0reverse_frame_1 - 0.0011 18.6 3.8 0.35 10.6 0.7 2.3 2 0 0 2 2 2 2 WSK motif SSP160 PF06933.11 NODE_53649_length_328_cov_68.419795_g45721_i0forward_frame_1 - 0.016 13.4 1.4 0.018 13.3 1.4 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF778 PF05608.12 NODE_53632_length_328_cov_99.412969_g45705_i0reverse_frame_1 - 0.14 12.6 1.3 0.16 12.4 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF778) CDC27 PF09507.10 NODE_53631_length_328_cov_114.051195_g45704_i0forward_frame_1 - 1.4 8.2 15.3 1.6 8.0 15.3 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 NPR3 PF03666.13 NODE_53631_length_328_cov_114.051195_g45704_i0forward_frame_1 - 1.8 7.3 11.0 2 7.1 11.0 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF913 PF06025.12 NODE_53631_length_328_cov_114.051195_g45704_i0forward_frame_1 - 3.1 6.7 6.1 3.3 6.6 6.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) SLC12 PF03522.15 NODE_53631_length_328_cov_114.051195_g45704_i0forward_frame_1 - 3.2 6.7 8.2 3.3 6.6 8.2 1.0 1 0 0 1 1 1 0 Solute carrier family 12 V_ATPase_I PF01496.19 NODE_53631_length_328_cov_114.051195_g45704_i0forward_frame_1 - 3.8 5.3 8.5 3.9 5.3 8.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Astro_capsid_p PF12226.8 NODE_53631_length_328_cov_114.051195_g45704_i0forward_frame_1 - 4.5 6.3 17.2 5.7 6.0 17.2 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein MDM10 PF12519.8 NODE_53631_length_328_cov_114.051195_g45704_i0forward_frame_1 - 4.5 6.0 8.8 5.1 5.9 8.8 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 Presenilin PF01080.17 NODE_53631_length_328_cov_114.051195_g45704_i0forward_frame_1 - 5.9 5.5 13.6 7.2 5.3 13.6 1.1 1 0 0 1 1 1 0 Presenilin RCC1_2 PF13540.6 NODE_53630_length_328_cov_116.064846_g45703_i0reverse_frame_1 - 0.00016 21.4 1.2 0.00033 20.3 1.2 1.5 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_53630_length_328_cov_116.064846_g45703_i0reverse_frame_1 - 0.00023 21.7 3.3 0.00035 21.1 3.3 1.7 1 1 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat His_Me_b4a2 PF18275.1 NODE_53630_length_328_cov_116.064846_g45703_i0forward_frame_1 - 3.9 7.6 5.3 11 6.2 0.5 2.6 3 0 0 3 3 3 0 His-Me finger endonuclease beta4-alpha2 domain Prokineticin PF06607.11 NODE_53627_length_328_cov_125.156997_g45700_i0forward_frame_1 - 0.13 12.6 2.9 0.17 12.2 2.9 1.3 1 1 0 1 1 1 0 Prokineticin DUF4787 PF16029.5 NODE_53625_length_328_cov_130.385666_g45698_i0reverse_frame_1 - 1.5e-15 57.0 1.7 3.5e-15 55.8 1.7 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4787) HEPN_DZIP3 PF18738.1 NODE_53624_length_328_cov_138.918089_g45697_i0reverse_frame_1 - 0.14 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 DZIP3/ hRUL138-like HEPN CTD PF12815.7 NODE_53621_length_328_cov_158.375427_g45694_i0reverse_frame_1 - 0.25 12.0 10.3 1.2 9.7 10.3 2.0 1 1 0 1 1 1 0 Spt5 C-terminal nonapeptide repeat binding Spt4 DUF4157 PF13699.6 NODE_53617_length_328_cov_173.982935_g45690_i0reverse_frame_1 - 0.12 12.6 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) Polysacc_synt_C PF14667.6 NODE_53604_length_329_cov_1.360544_g45677_i0forward_frame_1 - 0.00073 19.6 3.0 0.0012 19.0 3.0 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain YgbA_NO PF11756.8 NODE_53598_length_329_cov_1.714286_g45671_i0forward_frame_1 - 0.024 15.0 0.2 0.027 14.8 0.2 1.2 1 0 0 1 1 1 0 Nitrous oxide-stimulated promoter NHL PF01436.21 NODE_53594_length_329_cov_1.918367_g45667_i0reverse_frame_1 - 0.016 15.2 4.7 0.017 15.1 0.2 2.8 3 0 0 3 3 3 0 NHL repeat Ldl_recept_b PF00058.17 NODE_53594_length_329_cov_1.918367_g45667_i0reverse_frame_1 - 0.19 12.3 1.0 0.47 11.0 0.5 2.0 1 1 1 2 2 2 0 Low-density lipoprotein receptor repeat class B VirK PF06903.12 NODE_53593_length_329_cov_1.952381_g45666_i0forward_frame_1 - 0.064 13.3 0.1 0.086 12.9 0.1 1.1 1 0 0 1 1 1 0 VirK protein SCHIP-1 PF10148.9 NODE_53589_length_329_cov_2.105442_g45662_i0reverse_frame_1 - 0.0028 17.3 1.0 0.0039 16.9 1.0 1.2 1 0 0 1 1 1 1 Schwannomin-interacting protein 1 VRP3 PF03536.15 NODE_53588_length_329_cov_2.132653_g45661_i0reverse_frame_1 - 0.099 12.1 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Salmonella virulence-associated 28kDa protein GGDEF PF00990.21 NODE_53580_length_329_cov_2.408163_g45653_i0forward_frame_1 - 0.0014 18.4 0.1 0.0035 17.1 0.0 1.7 2 0 0 2 2 2 1 Diguanylate cyclase, GGDEF domain PI_PP_C PF18365.1 NODE_53580_length_329_cov_2.408163_g45653_i0forward_frame_1 - 0.035 14.1 0.0 0.046 13.7 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide phosphatase C-terminal domain MAAL_C PF07476.11 NODE_53580_length_329_cov_2.408163_g45653_i0forward_frame_1 - 0.091 11.9 0.0 0.097 11.8 0.0 1.0 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Herpes_UL7 PF01677.16 NODE_53579_length_329_cov_2.476190_g45652_i0reverse_frame_1 - 0.049 13.3 2.6 0.059 13.1 2.6 1.1 1 0 0 1 1 1 0 Herpesvirus UL7 like Orthoreo_P10 PF07204.11 NODE_53579_length_329_cov_2.476190_g45652_i0forward_frame_1 - 0.67 9.9 2.9 14 5.7 0.1 2.2 2 0 0 2 2 2 0 Orthoreovirus membrane fusion protein p10 zf-C3HC4_2 PF13923.6 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_1 - 0.0027 17.5 1.7 0.04 13.8 0.4 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_1 - 0.023 14.6 0.4 0.064 13.1 0.4 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_1 - 0.034 14.5 0.3 0.37 11.2 0.1 2.2 2 0 0 2 2 2 0 Ring finger domain zf-RING_11 PF17123.5 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_1 - 0.048 13.4 0.6 0.048 13.4 0.6 2.0 2 0 0 2 2 2 0 RING-like zinc finger NUDIX_4 PF14815.6 NODE_53575_length_329_cov_2.778912_g45648_i0forward_frame_1 - 0.14 12.2 0.1 0.17 11.9 0.1 1.1 1 0 0 1 1 1 0 NUDIX domain DUF21 PF01595.20 NODE_53573_length_329_cov_2.996599_g45646_i0forward_frame_1 - 0.032 13.9 0.2 0.038 13.7 0.2 1.1 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain NUDE_C PF04880.13 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_1 - 8.7 6.8 9.0 9.5 6.7 9.0 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region GST_C_3 PF14497.6 NODE_53567_length_329_cov_5.183673_g45640_i0reverse_frame_1 - 0.00028 21.0 0.0 0.00037 20.6 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Antimicrobial_3 PF08025.11 NODE_53567_length_329_cov_5.183673_g45640_i0forward_frame_1 - 0.15 12.0 0.4 0.72 9.8 0.0 2.0 1 1 1 2 2 2 0 Spider antimicrobial peptide RCC1 PF00415.18 NODE_53563_length_329_cov_48.700680_g45636_i0reverse_frame_1 - 4.5e-05 24.0 0.1 0.028 15.0 0.0 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_53563_length_329_cov_48.700680_g45636_i0reverse_frame_1 - 0.016 15.0 2.9 0.024 14.5 1.9 1.8 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Dsl1_C PF11989.8 NODE_53562_length_329_cov_48.955782_g45635_i0forward_frame_1 - 0.015 15.0 0.1 0.019 14.7 0.1 1.1 1 0 0 1 1 1 0 Retrograde transport protein Dsl1 C terminal Mito_morph_reg PF14972.6 NODE_53552_length_329_cov_70.319728_g45625_i0forward_frame_1 - 0.051 13.2 0.0 0.065 12.8 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator TPR_1 PF00515.28 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 1e-10 40.9 6.3 0.00052 19.7 0.2 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 1.3e-06 28.1 2.6 0.16 12.2 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.00069 19.6 5.1 0.55 10.6 0.1 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.013 16.0 0.1 0.033 14.7 0.0 1.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.016 15.5 0.4 0.064 13.7 0.1 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.017 14.8 0.2 0.033 13.9 0.2 1.5 1 0 0 1 1 1 0 TPR repeat TPR_12 PF13424.6 NODE_53545_length_329_cov_86.068027_g45618_i0forward_frame_1 - 0.018 15.3 0.0 8 6.8 0.0 2.5 2 1 0 2 2 2 0 Tetratricopeptide repeat Rapsyn_N PF10579.9 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.0026 17.8 0.1 0.0036 17.4 0.1 1.3 1 0 0 1 1 1 1 Rapsyn N-terminal myristoylation and linker region TPR_12 PF13424.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.018 15.3 0.6 0.46 10.8 0.0 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.028 14.9 0.2 0.064 13.8 0.1 1.6 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.05 13.6 0.1 4 7.7 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Mur_ligase_C PF02875.21 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.054 13.8 0.0 0.07 13.4 0.0 1.1 1 0 0 1 1 1 0 Mur ligase family, glutamate ligase domain DUF3885 PF13021.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.14 12.3 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3885) TPR_14 PF13428.6 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.14 13.0 0.1 3.9 8.5 0.0 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.43 10.5 0.2 0.43 10.5 0.2 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_53544_length_329_cov_93.751701_g45617_i0reverse_frame_1 - 0.95 9.7 5.8 1.5 9.1 0.6 2.8 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF5637 PF18687.1 NODE_53543_length_329_cov_94.500000_g45616_i0forward_frame_1 - 0.034 14.1 6.7 0.094 12.7 6.0 2.2 1 1 0 1 1 1 0 Family of unknown function (DUF5637) Nudix_N_2 PF14803.6 NODE_53543_length_329_cov_94.500000_g45616_i0forward_frame_1 - 1.4 8.9 12.0 3.7 7.5 12.0 1.7 1 1 0 1 1 1 0 Nudix N-terminal Dmrt1 PF12374.8 NODE_53542_length_329_cov_101.517007_g45615_i0forward_frame_1 - 0.0028 18.1 3.3 0.0049 17.3 3.3 1.4 1 0 0 1 1 1 1 Double-sex mab3 related transcription factor 1 DUF5429 PF17494.2 NODE_53541_length_329_cov_101.554422_g45614_i0reverse_frame_1 - 0.022 14.8 0.4 0.022 14.8 0.4 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5429) DUF4620 PF15399.6 NODE_53524_length_329_cov_339.721088_g45597_i0reverse_frame_1 - 0.019 15.3 0.2 0.023 15.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4620) Exo_endo_phos_2 PF14529.6 NODE_53519_length_330_cov_1.189831_g45592_i0reverse_frame_1 - 8.5e-05 22.4 0.0 0.00014 21.7 0.0 1.3 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase YihI PF04220.12 NODE_53513_length_330_cov_1.488136_g45586_i0reverse_frame_1 - 6 6.6 8.7 8.8 6.0 8.7 1.3 1 0 0 1 1 1 0 Der GTPase activator (YihI) UQ_con PF00179.26 NODE_53512_length_330_cov_1.528814_g45585_i0reverse_frame_1 - 0.026 14.2 0.0 0.036 13.7 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-conjugating enzyme Pannexin_like PF12534.8 NODE_53505_length_330_cov_1.789831_g45578_i0reverse_frame_1 - 0.71 8.9 3.6 0.82 8.7 3.6 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 HATPase_c PF02518.26 NODE_53489_length_330_cov_2.728814_g45562_i0reverse_frame_1 - 4.4e-16 59.4 0.1 6.9e-16 58.7 0.1 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 NODE_53489_length_330_cov_2.728814_g45562_i0reverse_frame_1 - 0.015 15.2 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4736 PF15883.5 NODE_53489_length_330_cov_2.728814_g45562_i0forward_frame_1 - 0.082 12.6 0.1 0.089 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) BRX_assoc PF16627.5 NODE_53477_length_330_cov_8.305085_g45550_i0reverse_frame_1 - 0.039 14.1 2.2 0.17 12.0 0.1 2.2 2 0 0 2 2 2 0 Unstructured region between BRX_N and BRX domain SSP160 PF06933.11 NODE_53471_length_330_cov_41.138983_g45544_i0forward_frame_1 - 0.062 11.5 4.2 0.057 11.6 4.2 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Dicty_REP PF05086.12 NODE_53471_length_330_cov_41.138983_g45544_i0forward_frame_1 - 0.5 8.3 1.3 0.5 8.3 1.3 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein B277 PF17623.2 NODE_53471_length_330_cov_41.138983_g45544_i0forward_frame_1 - 2.9 6.9 5.3 3.8 6.5 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF1539 PF07560.11 NODE_53464_length_330_cov_64.501695_g45538_i0forward_frame_1 - 0.0097 16.0 2.7 0.014 15.5 2.7 1.4 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1539) Sec20 PF03908.13 NODE_53454_length_330_cov_76.230508_g45528_i0forward_frame_1 - 0.25 11.3 0.8 0.4 10.6 0.8 1.3 1 0 0 1 1 1 0 Sec20 PI3K_rbd PF00794.18 NODE_53452_length_330_cov_76.786441_g45526_i0forward_frame_1 - 9.4e-05 22.5 0.0 0.00012 22.2 0.0 1.2 1 0 0 1 1 1 1 PI3-kinase family, ras-binding domain Oxidored-like PF09791.9 NODE_53451_length_330_cov_83.918644_g45525_i0reverse_frame_1 - 0.00057 19.5 1.2 0.00083 19.0 1.2 1.3 1 0 0 1 1 1 1 Oxidoreductase-like protein, N-terminal DCA16 PF15349.6 NODE_53451_length_330_cov_83.918644_g45525_i0reverse_frame_1 - 0.066 12.8 0.2 0.077 12.6 0.2 1.1 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 MNE1 PF13762.6 NODE_53448_length_330_cov_90.200000_g45522_i0forward_frame_1 - 0.054 13.5 0.1 0.081 12.9 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component Como_LCP PF02247.16 NODE_53436_length_330_cov_132.837288_g45510_i0forward_frame_1 - 0.089 11.4 0.0 0.11 11.1 0.0 1.1 1 0 0 1 1 1 0 Large coat protein zf-RING_2 PF13639.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 1.8e-07 31.3 10.1 1.8e-07 31.3 10.1 1.5 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 1.2e-05 25.5 9.9 1.9e-05 24.9 9.8 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 1.6e-05 24.8 7.6 3.4e-05 23.8 7.6 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 8.4e-05 22.4 10.8 8.4e-05 22.4 10.8 1.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 9.9e-05 22.1 8.2 0.0002 21.1 8.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.00035 20.2 7.5 0.00035 20.2 7.5 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.0011 18.8 9.6 0.0024 17.7 9.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.0019 18.2 4.9 0.0029 17.6 4.9 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-HC5HC2H_2 PF13832.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.003 17.7 7.6 0.0041 17.3 7.5 1.3 1 1 0 1 1 1 1 PHD-zinc-finger like domain PHD PF00628.29 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.0052 16.6 9.0 0.01 15.7 9.0 1.5 1 0 0 1 1 1 1 PHD-finger zf-RING_5 PF14634.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.013 15.4 9.9 0.013 15.4 9.9 1.6 1 1 0 1 1 1 0 zinc-RING finger domain Zf_RING PF16744.5 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.014 15.5 5.8 0.025 14.7 5.8 1.5 1 0 0 1 1 1 0 KIAA1045 RING finger zf-RING_4 PF14570.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.021 14.6 9.0 0.042 13.7 8.9 1.6 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.072 13.3 8.3 0.44 10.8 6.4 2.6 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Zn_ribbon_17 PF17120.5 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.13 11.9 8.1 0.33 10.6 8.1 1.9 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING-like PF08746.11 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 0.98 9.8 9.8 0.98 9.8 8.2 1.9 1 1 1 2 2 2 0 RING-like domain zf-C3H2C3 PF17122.5 NODE_53434_length_330_cov_137.291525_g45508_i0reverse_frame_1 - 1.3 9.1 11.0 17 5.5 11.1 2.6 1 1 0 1 1 1 0 Zinc-finger Fer2 PF00111.27 NODE_53426_length_330_cov_4876.257627_g45500_i0reverse_frame_1 - 2e-05 24.5 0.5 3.7e-05 23.6 0.1 1.7 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain LRR19-TM PF15176.6 NODE_53424_length_331_cov_0.945946_g45498_i0forward_frame_3 - 6 6.9 6.6 5 7.2 1.9 2.0 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain Baculo_p47 PF05112.12 NODE_53421_length_331_cov_1.635135_g45495_i0reverse_frame_3 - 0.038 13.6 4.5 0.038 13.6 4.5 1.1 1 0 0 1 1 1 0 Baculovirus P47 protein TAFII28 PF04719.14 NODE_53421_length_331_cov_1.635135_g45495_i0forward_frame_3 - 0.05 13.7 0.8 0.15 12.1 0.8 1.9 1 1 0 1 1 1 0 hTAFII28-like protein conserved region Transpos_assoc PF13963.6 NODE_53418_length_331_cov_1.881757_g45492_i0forward_frame_2 - 0.23 11.8 2.0 0.33 11.3 2.0 1.3 1 0 0 1 1 1 0 Transposase-associated domain NotI PF12183.8 NODE_53417_length_331_cov_1.888514_g45491_i0reverse_frame_3 - 0.0097 15.3 0.1 0.011 15.0 0.1 1.0 1 0 0 1 1 1 1 Restriction endonuclease NotI Caprin-1_dimer PF18293.1 NODE_53415_length_331_cov_2.010135_g45489_i0forward_frame_3 - 0.016 15.7 0.3 0.025 15.1 0.1 1.4 2 0 0 2 2 2 0 Caprin-1 dimerization domain DUF1657 PF07870.11 NODE_53415_length_331_cov_2.010135_g45489_i0forward_frame_3 - 0.033 14.1 2.4 0.24 11.3 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1657) DUF5601 PF18151.1 NODE_53415_length_331_cov_2.010135_g45489_i0forward_frame_3 - 0.065 13.6 1.3 0.096 13.0 1.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5601) R-HINP1I PF11463.8 NODE_53415_length_331_cov_2.010135_g45489_i0forward_frame_2 - 0.048 13.1 0.4 0.057 12.9 0.4 1.0 1 0 0 1 1 1 0 R.HinP1I restriction endonuclease Nbl1_Borealin_N PF10444.9 NODE_53414_length_331_cov_2.064189_g45488_i0forward_frame_2 - 0.025 14.2 1.4 2 8.1 0.1 2.3 1 1 1 2 2 2 0 Nbl1 / Borealin N terminal SNAPc19 PF15497.6 NODE_53412_length_331_cov_2.111486_g45486_i0reverse_frame_2 - 0.16 12.4 1.4 0.36 11.3 0.2 1.9 1 1 1 2 2 2 0 snRNA-activating protein complex subunit 19, SNAPc subunit 19 MannoseP_isomer PF01050.18 NODE_53409_length_331_cov_2.280405_g45483_i0forward_frame_3 - 1.3e-32 112.8 0.3 1.3e-32 112.7 0.3 1.0 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_2 PF07883.11 NODE_53409_length_331_cov_2.280405_g45483_i0forward_frame_3 - 2.4e-08 33.5 0.0 3.3e-08 33.1 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cpta_toxin PF07254.12 NODE_53408_length_331_cov_2.300676_g45482_i0reverse_frame_2 - 0.045 13.7 0.3 0.05 13.6 0.3 1.1 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system WW PF00397.26 NODE_53398_length_331_cov_2.966216_g45472_i0forward_frame_3 - 0.96 9.6 3.7 15 5.8 0.3 2.3 2 0 0 2 2 2 0 WW domain PTA_PTB PF01515.19 NODE_53397_length_331_cov_3.145270_g45471_i0reverse_frame_2 - 8e-27 94.4 0.1 8.7e-27 94.3 0.1 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase DUF4131 PF13567.6 NODE_53396_length_331_cov_3.449324_g45470_i0forward_frame_3 - 1.4 8.5 6.4 2.9 7.5 6.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) zf-BED PF02892.15 NODE_53396_length_331_cov_3.449324_g45470_i0forward_frame_2 - 3.9 7.6 8.1 0.29 11.2 1.5 2.3 2 1 0 2 2 2 0 BED zinc finger Centro_C10orf90 PF17730.1 NODE_53394_length_331_cov_3.513514_g45468_i0forward_frame_2 - 0.084 11.6 0.1 0.12 11.1 0.1 1.1 1 0 0 1 1 1 0 Centrosomal C10orf90 SF3A2 PF16835.5 NODE_53394_length_331_cov_3.513514_g45468_i0forward_frame_2 - 0.17 12.3 0.0 0.2 12.0 0.0 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) GWT1 PF06423.12 NODE_53384_length_331_cov_60.320946_g45458_i0reverse_frame_3 - 0.32 11.1 5.8 0.39 10.8 5.8 1.2 1 0 0 1 1 1 0 GWT1 YiiD_C PF09500.10 NODE_53383_length_331_cov_61.959459_g45457_i0reverse_frame_2 - 0.086 12.7 0.0 0.087 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative thioesterase (yiiD_Cterm) FUSC PF04632.12 NODE_53381_length_331_cov_70.337838_g45455_i0reverse_frame_3 - 0.34 9.4 0.0 0.4 9.2 0.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF4992 PF16383.5 NODE_53380_length_331_cov_73.868243_g45454_i0reverse_frame_3 - 0.063 12.8 0.7 0.068 12.7 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF2614 PF11023.8 NODE_53380_length_331_cov_73.868243_g45454_i0forward_frame_3 - 3.8 7.6 12.1 0.53 10.4 7.4 1.8 1 1 1 2 2 2 0 Zinc-ribbon containing domain DNA_pol_lambd_f PF10391.9 NODE_53376_length_331_cov_79.614865_g45450_i0reverse_frame_2 - 0.084 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda EFG_II PF14492.6 NODE_53376_length_331_cov_79.614865_g45450_i0reverse_frame_2 - 0.16 12.1 0.1 5.3 7.2 0.1 2.3 2 0 0 2 2 2 0 Elongation Factor G, domain II NTP_transf_2 PF01909.23 NODE_53375_length_331_cov_79.854730_g45449_i0reverse_frame_3 - 0.13 12.6 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyltransferase domain FmrO PF07091.11 NODE_53371_length_331_cov_88.584459_g45445_i0reverse_frame_2 - 0.18 11.3 0.0 0.19 11.2 0.0 1.0 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) GCV_T PF01571.21 NODE_53367_length_331_cov_100.878378_g45441_i0forward_frame_2 - 0.064 12.6 0.1 0.3 10.4 0.0 1.8 1 1 1 2 2 2 0 Aminomethyltransferase folate-binding domain DUF3088 PF11287.8 NODE_53366_length_331_cov_103.364865_g45440_i0reverse_frame_2 - 0.095 12.5 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3088) Menin PF05053.13 NODE_53365_length_331_cov_117.766892_g45439_i0reverse_frame_3 - 1.5 7.0 6.1 1.8 6.9 6.1 1.1 1 0 0 1 1 1 0 Menin DUF4487 PF14868.6 NODE_53360_length_331_cov_199.679054_g45434_i0reverse_frame_3 - 0.0075 15.2 8.0 0.0092 14.9 8.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4487) MNNL PF07657.13 NODE_53359_length_331_cov_221.108108_g45433_i0reverse_frame_2 - 0.0033 17.4 0.7 0.004 17.2 0.4 1.3 1 1 0 1 1 1 1 N terminus of Notch ligand PSI PF01437.25 NODE_53356_length_331_cov_514.780405_g45430_i0reverse_frame_3 - 0.53 10.9 6.8 4.1 8.0 3.9 2.2 1 1 1 2 2 2 0 Plexin repeat GATase PF00117.28 NODE_53349_length_331_cov_7976.530405_g45423_i0reverse_frame_2 - 0.048 13.4 0.0 0.056 13.2 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferase class-I # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks240.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks240.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks240.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks240.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CENP-P PF13096.6 NODE_53346_length_332_cov_1.208754_g45420_i0forward_frame_3 - 0.054 13.2 0.4 0.066 12.9 0.4 1.1 1 0 0 1 1 1 0 CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P DUF2101 PF09874.9 NODE_53342_length_332_cov_1.744108_g45416_i0forward_frame_3 - 0.97 9.1 9.5 1.2 8.8 9.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) zf-RING_4 PF14570.6 NODE_53337_length_332_cov_2.033670_g45411_i0reverse_frame_2 - 0.0098 15.7 1.2 0.0098 15.7 1.2 1.7 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain tRNA-synt_1b PF00579.25 NODE_53337_length_332_cov_2.033670_g45411_i0forward_frame_3 - 3.7e-15 56.0 0.2 5.6e-15 55.4 0.2 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) MarR_2 PF12802.7 NODE_53337_length_332_cov_2.033670_g45411_i0forward_frame_3 - 0.023 14.6 0.1 0.33 10.9 0.1 2.4 2 1 1 3 3 3 0 MarR family ASH PF15780.5 NODE_53335_length_332_cov_2.094276_g45409_i0reverse_frame_3 - 0.011 15.9 0.3 0.045 14.0 0.3 1.8 1 1 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF5347 PF17282.2 NODE_53334_length_332_cov_2.198653_g45408_i0reverse_frame_3 - 0.029 14.7 0.1 0.04 14.2 0.1 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5347) FGFR3_TM PF18123.1 NODE_53334_length_332_cov_2.198653_g45408_i0reverse_frame_3 - 0.15 11.6 0.1 0.28 10.7 0.1 1.5 1 0 0 1 1 1 0 Fibroblast growth factor receptor 3 transmembrane domain STE2 PF02116.15 NODE_53330_length_332_cov_2.316498_g45404_i0reverse_frame_2 - 0.032 13.5 1.4 0.044 13.1 1.2 1.3 1 1 0 1 1 1 0 Fungal pheromone mating factor STE2 GPCR COX2_TM PF02790.15 NODE_53330_length_332_cov_2.316498_g45404_i0reverse_frame_2 - 0.14 12.3 1.0 0.21 11.7 0.1 1.7 2 1 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain PCNA_N PF00705.18 NODE_53329_length_332_cov_2.356902_g34327_i1reverse_frame_2 - 0.076 12.7 0.1 0.09 12.5 0.1 1.2 1 0 0 1 1 1 0 Proliferating cell nuclear antigen, N-terminal domain DUF4227 PF14004.6 NODE_53329_length_332_cov_2.356902_g34327_i1forward_frame_3 - 0.14 12.1 2.2 0.97 9.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) Pex24p PF06398.11 NODE_53329_length_332_cov_2.356902_g34327_i1forward_frame_3 - 0.18 10.7 2.2 0.21 10.6 2.2 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2721 PF11026.8 NODE_53329_length_332_cov_2.356902_g34327_i1forward_frame_3 - 1 9.3 8.3 1.4 8.8 8.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) COX2_TM PF02790.15 NODE_53329_length_332_cov_2.356902_g34327_i1forward_frame_3 - 1.2 9.3 5.5 7.4 6.8 1.3 2.1 1 1 1 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane domain RRM_1 PF00076.22 NODE_53328_length_332_cov_2.427609_g45403_i0forward_frame_3 - 0.0016 18.2 0.0 0.0022 17.8 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Defensin_beta_2 PF13841.6 NODE_53328_length_332_cov_2.427609_g45403_i0forward_frame_2 - 0.22 12.1 0.2 0.22 12.1 0.2 2.6 3 0 0 3 3 3 0 Beta defensin Holin_SPP1 PF04688.13 NODE_53327_length_332_cov_2.457912_g45402_i0reverse_frame_3 - 0.88 9.8 2.8 0.49 10.6 0.1 1.8 2 0 0 2 2 2 0 SPP1 phage holin Peptidase_M50B PF13398.6 NODE_53327_length_332_cov_2.457912_g45402_i0reverse_frame_3 - 1.6 8.3 8.9 2.2 7.8 8.9 1.3 1 1 0 1 1 1 0 Peptidase M50B-like HATPase_c PF02518.26 NODE_53324_length_332_cov_2.673401_g45399_i0reverse_frame_3 - 2.2e-17 63.6 0.1 3e-17 63.2 0.1 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RcsC PF09456.10 NODE_53324_length_332_cov_2.673401_g45399_i0reverse_frame_3 - 1.9e-05 24.5 0.0 3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 RcsC Alpha-Beta-Loop (ABL) DUF5423 PF17461.2 NODE_53322_length_332_cov_2.824916_g45397_i0forward_frame_3 - 0.045 12.6 1.7 0.057 12.3 1.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) GAF_3 PF13492.6 NODE_53318_length_332_cov_3.016835_g45393_i0reverse_frame_2 - 9.7e-09 35.7 0.0 1.2e-08 35.3 0.0 1.1 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 NODE_53318_length_332_cov_3.016835_g45393_i0reverse_frame_2 - 0.1 12.9 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 GAF domain Poxvirus_B22R_C PF13168.6 NODE_53317_length_332_cov_3.104377_g45392_i0forward_frame_3 - 0.12 11.9 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 Poxvirus B22R protein C-terminal CaATP_NAI PF12515.8 NODE_53317_length_332_cov_3.104377_g45392_i0forward_frame_2 - 0.092 12.4 0.4 0.52 10.0 0.1 2.0 2 0 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain DUF4656 PF15551.6 NODE_53316_length_332_cov_3.121212_g45391_i0forward_frame_3 - 5.5 6.4 7.7 5.6 6.4 7.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) Lamprin PF06403.11 NODE_53312_length_332_cov_4.582492_g45387_i0forward_frame_3 - 1.6 8.7 11.0 3.7 7.5 1.8 2.1 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_53312_length_332_cov_4.582492_g45387_i0forward_frame_2 - 0.83 9.6 15.7 0.65 10.0 3.2 2.1 1 1 1 2 2 2 0 Lamprin DUF3675 PF12428.8 NODE_53310_length_332_cov_12.377104_g45385_i0reverse_frame_3 - 0.047 14.3 0.6 0.084 13.4 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) Pkinase PF00069.25 NODE_53310_length_332_cov_12.377104_g45385_i0forward_frame_2 - 0.00018 21.0 1.3 0.0002 20.8 1.3 1.3 1 1 0 1 1 1 1 Protein kinase domain Gyro_capsid PF04162.12 NODE_53308_length_332_cov_15.360269_g45383_i0reverse_frame_3 - 0.022 13.2 5.5 0.023 13.2 5.5 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) DUF4407 PF14362.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.3e-06 26.0 10.7 5.7e-06 25.9 10.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) DUF1640 PF07798.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.7e-05 24.9 14.1 2.3e-05 24.5 14.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) Apolipoprotein PF01442.18 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.6e-05 23.1 11.4 9.7e-05 22.3 11.4 1.4 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF3584 PF12128.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 7.5e-05 20.5 15.2 7.9e-05 20.4 15.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Cor1 PF04803.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.00054 20.2 13.3 0.0017 18.6 12.8 1.9 1 1 0 1 1 1 1 Cor1/Xlr/Xmr conserved region DUF883 PF05957.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.00076 20.0 6.6 0.023 15.3 3.3 2.2 1 1 2 3 3 3 2 Bacterial protein of unknown function (DUF883) Filament PF00038.21 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0013 18.3 14.8 0.0031 17.1 14.8 1.6 1 1 0 1 1 1 1 Intermediate filament protein Phasin PF05597.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0017 18.3 7.8 0.0073 16.3 4.2 2.2 1 1 0 2 2 2 1 Poly(hydroxyalcanoate) granule associated protein (phasin) Baculo_PEP_C PF04513.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0019 18.3 10.1 0.029 14.4 1.2 2.1 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus TSNAXIP1_N PF15739.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.003 17.9 13.7 0.006 16.9 13.7 1.7 1 1 0 1 1 1 1 Translin-associated factor X-interacting N-terminus FAM184 PF15665.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0077 16.0 15.8 0.55 10.0 0.8 2.1 1 1 0 1 1 1 1 Family with sequence similarity 184, A and B MADF_DNA_bdg PF10545.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0093 16.3 6.6 0.41 11.0 0.7 2.6 1 1 1 2 2 2 2 Alcohol dehydrogenase transcription factor Myb/SANT-like Exonuc_VII_L PF02601.15 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.0098 15.5 11.6 0.011 15.3 11.6 1.0 1 0 0 1 1 1 1 Exonuclease VII, large subunit Prominin PF05478.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.01 13.8 8.1 0.012 13.7 8.1 1.1 1 0 0 1 1 1 0 Prominin YlqD PF11068.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.012 16.0 18.1 0.28 11.6 10.1 2.1 1 1 1 2 2 2 0 YlqD protein Sds3 PF08598.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.014 15.4 19.6 0.13 12.2 9.8 2.1 1 1 1 2 2 2 0 Sds3-like CotJB PF12652.7 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.015 15.5 5.3 0.38 11.0 0.6 2.5 1 1 1 2 2 2 0 CotJB protein Phage_Mu_Gam PF07352.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.017 15.0 19.1 0.11 12.4 3.5 2.6 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein DUF3150 PF11348.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.021 14.1 6.0 0.72 9.0 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3150) AcylCoA_dehyd_C PF12186.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.021 14.9 6.0 0.35 11.0 0.5 2.4 1 1 2 3 3 2 0 Acyl-CoA dehydrogenase C terminal ApoO PF09769.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.024 14.6 4.8 1.2 9.2 0.5 2.0 1 1 1 2 2 2 0 Apolipoprotein O Mitofilin PF09731.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.024 13.5 15.9 0.032 13.1 15.9 1.2 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Gp58 PF07902.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.026 12.8 8.2 0.027 12.8 8.2 1.0 1 0 0 1 1 1 0 gp58-like protein OmpH PF03938.14 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.046 14.1 18.4 0.059 13.7 17.7 1.5 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4709 PF15821.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.049 13.9 10.3 0.077 13.3 6.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4709) PKK PF12474.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.05 13.7 19.5 0.036 14.2 10.4 2.1 1 1 1 2 2 2 0 Polo kinase kinase TetR_C_24 PF17932.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.055 13.7 3.7 3.6 7.9 0.2 2.7 1 1 2 3 3 3 0 Tetracyclin repressor-like, C-terminal domain DUF5305 PF17231.2 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.059 12.8 6.9 0.71 9.2 1.6 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5305) RRF PF01765.19 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.062 13.3 14.5 0.13 12.2 14.5 1.5 1 1 0 1 1 1 0 Ribosome recycling factor Tup_N PF08581.10 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.07 13.4 19.3 0.92 9.9 4.9 3.5 1 1 1 2 2 2 0 Tup N-terminal DUF725 PF05267.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.075 13.0 8.2 1.1 9.2 1.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF725) DUF2362 PF10154.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.079 11.9 9.8 0.085 11.8 9.8 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2362) TetR_C_13 PF16925.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.09 12.7 2.6 2 8.4 0.1 2.1 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PIN_8 PF18476.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.092 12.6 11.2 0.12 12.3 11.2 1.1 1 0 0 1 1 1 0 PIN like domain Muted PF14942.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.097 13.0 17.5 0.032 14.6 7.7 2.2 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein GCP_C_terminal PF04130.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.1 12.0 3.2 0.32 10.4 3.2 1.8 1 1 0 1 1 1 0 Gamma tubulin complex component C-terminal V-ATPase_G_2 PF16999.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.11 12.9 7.9 2.1 8.8 3.4 2.6 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit RRF_GI PF12614.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.12 12.5 4.1 0.15 12.2 4.1 1.1 1 0 0 1 1 1 0 Ribosome recycling factor GLTP PF08718.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.12 12.6 7.7 2.8 8.2 4.0 2.1 1 1 1 2 2 2 0 Glycolipid transfer protein (GLTP) GrpE PF01025.19 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.13 11.9 17.2 1.2 8.8 8.6 2.1 1 1 1 2 2 2 0 GrpE DUF2115 PF09888.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.13 12.7 8.7 0.24 11.9 8.7 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) DUF4618 PF15397.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.16 11.4 17.5 0.72 9.2 17.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) DUF5344 PF17279.2 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.17 12.5 16.1 0.18 12.4 3.3 2.8 1 1 2 3 3 3 0 Family of unknown function (DUF5344) CCDC-167 PF15188.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.17 12.2 19.1 1.2 9.5 10.4 3.3 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 DUF4168 PF13767.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.19 12.9 10.5 16 6.7 10.5 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4168) TolA_bind_tri PF16331.5 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.21 11.7 17.6 0.47 10.6 1.4 3.5 1 1 1 2 2 2 0 TolA binding protein trimerisation Phage_TAC_4 PF08748.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.23 11.8 4.6 0.37 11.1 0.1 2.2 2 1 0 2 2 2 0 Phage tail assembly chaperone Uso1_p115_C PF04871.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.28 11.5 15.4 2.3 8.6 15.4 2.1 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region HSP70 PF00012.20 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.28 9.3 13.4 0.3 9.2 13.4 1.0 1 0 0 1 1 1 0 Hsp70 protein RTX PF02382.15 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.31 10.7 3.6 0.33 10.6 3.6 1.2 1 0 0 1 1 1 0 N-terminal domain in RTX protein Wx5_PLAF3D7 PF09688.10 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.32 11.0 14.4 0.26 11.3 3.1 2.7 1 1 2 3 3 3 0 Protein of unknown function (Wx5_PLAF3D7) YtxH PF12732.7 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.34 11.5 11.4 1.9 9.1 1.3 2.1 1 1 1 2 2 2 0 YtxH-like protein Nbl1_Borealin_N PF10444.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.38 10.4 12.5 0.85 9.3 0.8 3.4 1 1 2 3 3 3 0 Nbl1 / Borealin N terminal SpmSyn_N PF17950.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.38 11.0 12.2 0.37 11.0 0.7 3.0 1 1 2 3 3 3 0 S-adenosylmethionine decarboxylase N -terminal DUF4455 PF14643.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.41 9.2 16.8 1.1 7.9 16.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4455) V-ATPase_G PF03179.15 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.41 11.2 12.0 1 9.9 11.6 1.8 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit STAT_alpha PF01017.20 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.44 10.4 13.8 0.64 9.9 13.8 1.3 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF5339 PF17274.2 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.45 11.4 14.4 3.3 8.6 6.5 3.4 1 1 2 3 3 3 0 Family of unknown function (DUF5339) DUF1451 PF07295.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.46 10.5 7.4 0.58 10.2 7.4 1.3 1 0 0 1 1 1 0 Zinc-ribbon containing domain FliG_N PF14842.6 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.48 11.0 5.7 1.8 9.1 0.7 2.1 1 1 1 2 2 2 0 FliG N-terminal domain WXG100 PF06013.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.5 10.6 6.0 8.4 6.7 1.5 2.7 1 1 1 2 2 2 0 Proteins of 100 residues with WXG Aida_N PF08910.10 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.55 10.7 7.2 0.71 10.3 0.9 2.2 1 1 1 2 2 2 0 Aida N-terminus HDV_ag PF01517.18 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.69 9.7 4.7 0.15 11.8 0.3 1.9 1 1 1 2 2 2 0 Hepatitis delta virus delta antigen Mt_ATP-synt_D PF05873.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.71 9.7 12.3 0.3 10.9 2.7 2.2 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) BshC PF10079.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.76 8.4 13.3 0.83 8.3 13.3 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC Med15_fungi PF05397.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.9 9.8 10.5 0.34 11.2 2.4 2.6 1 1 1 2 2 2 0 Mediator complex subunit 15 CENP-H PF05837.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.9 10.0 14.8 1.6 9.2 12.2 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) ApoLp-III PF07464.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 0.98 9.5 13.7 1.9 8.5 13.7 1.5 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) SAM_Exu PF18609.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1 9.5 8.3 0.35 11.0 0.6 2.8 1 1 2 3 3 3 0 Exuperantia SAM-like domain V_ATPase_I PF01496.19 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.1 7.0 9.3 1.3 6.8 9.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.4 9.0 12.6 2.8 8.0 5.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) AI-2E_transport PF01594.16 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.6 7.8 3.5 2.8 7.0 3.5 1.6 1 1 0 1 1 1 0 AI-2E family transporter DUF1690 PF07956.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 1.8 9.0 14.9 4.4 7.7 14.9 1.6 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) TetR_C_37 PF18665.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 2 9.1 10.3 1 10.0 2.7 2.7 1 1 2 3 3 3 0 Tetracyclin repressor-like, C-terminal domain RNase_J_C PF17770.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 2.6 9.1 8.7 3.2 8.9 2.5 2.3 1 1 1 2 2 2 0 Ribonuclease J C-terminal domain SPOUT_MTase PF02590.17 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 2.7 8.0 8.2 9.9 6.1 2.3 2.0 1 1 1 2 2 2 0 Predicted SPOUT methyltransferase DUF948 PF06103.11 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 2.9 8.2 8.2 1.3e+02 2.9 8.2 2.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Adhesin_P1_N PF18652.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 3.2 7.8 17.5 2.9 8.0 2.8 4.0 1 1 1 2 2 2 0 Adhesin P1 N-terminal domain YojJ PF10372.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 3.7 7.7 11.2 0.76 9.9 3.0 2.7 1 1 2 3 3 3 0 Bacterial membrane-spanning protein N-terminus DUF3144 PF11342.8 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 3.9 7.8 7.5 24 5.3 0.2 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF3144) ACCA PF03255.14 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 4.6 7.1 13.8 6.2 6.7 2.1 2.1 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YabA PF06156.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.1 7.8 15.7 11 6.7 7.3 2.1 1 1 1 2 2 2 0 Initiation control protein YabA Endonuc_Holl PF10107.9 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.1 6.9 9.7 1.2 9.0 4.9 1.8 1 1 1 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase ZnuA PF01297.17 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.2 6.4 7.8 9.9 5.5 3.7 2.2 1 1 2 3 3 3 0 Zinc-uptake complex component A periplasmic Nup54_57_C PF18570.1 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 5.4 6.7 17.8 9.3 5.9 2.4 4.6 2 2 1 4 4 4 0 NUP57/Nup54 C-terminal domain COQ7 PF03232.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 7.2 6.4 11.1 4 7.2 4.5 2.4 1 1 1 2 2 2 0 Ubiquinone biosynthesis protein COQ7 ZYG-11_interact PF05884.12 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 9.1 5.6 7.2 38 3.6 7.2 1.8 1 1 0 1 1 1 0 Interactor of ZYG-11 TMPIT PF07851.13 NODE_53307_length_332_cov_17.505051_g45382_i0reverse_frame_3 - 9.3 5.4 12.6 18 4.4 12.6 1.6 1 1 0 1 1 1 0 TMPIT-like protein PHF5 PF03660.14 NODE_53306_length_332_cov_23.720539_g45381_i0forward_frame_2 - 0.033 14.4 3.0 0.051 13.8 3.0 1.3 1 0 0 1 1 1 0 PHF5-like protein DUF627 PF04781.12 NODE_53301_length_332_cov_52.555556_g45376_i0reverse_frame_3 - 0.12 12.4 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF627) RLL PF10036.9 NODE_53301_length_332_cov_52.555556_g45376_i0reverse_frame_2 - 0.024 14.5 0.2 0.028 14.3 0.2 1.0 1 0 0 1 1 1 0 RNA transcription, translation and transport factor protein YIF1 PF03878.15 NODE_53301_length_332_cov_52.555556_g45376_i0forward_frame_2 - 0.4 10.2 3.8 0.43 10.0 3.8 1.1 1 0 0 1 1 1 0 YIF1 YwcE PF17368.2 NODE_53295_length_332_cov_70.764310_g45370_i0reverse_frame_3 - 0.7 10.6 11.4 0.93 10.2 11.4 1.1 1 0 0 1 1 1 0 Spore morphogenesis and germination YwcE Crisp PF08562.10 NODE_53295_length_332_cov_70.764310_g45370_i0forward_frame_3 - 0.082 13.5 2.9 0.11 13.1 2.9 1.1 1 0 0 1 1 1 0 Crisp QSregVF PF13652.6 NODE_53286_length_332_cov_100.154882_g45361_i0reverse_frame_3 - 0.087 12.9 0.0 0.14 12.2 0.0 1.4 1 1 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor N_BRCA1_IG PF16158.5 NODE_53286_length_332_cov_100.154882_g45361_i0reverse_frame_2 - 0.00059 20.5 0.0 0.00079 20.1 0.0 1.1 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene Microvir_J PF04726.13 NODE_53285_length_332_cov_105.181818_g45360_i0forward_frame_3 - 1.9 8.5 5.5 0.59 10.2 0.8 2.5 2 1 1 3 3 3 0 Microvirus J protein DUF3021 PF11457.8 NODE_53284_length_332_cov_116.037037_g45359_i0reverse_frame_2 - 0.099 13.0 3.7 0.17 12.2 3.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) HSDR_N PF04313.14 NODE_53280_length_332_cov_131.222222_g45355_i0forward_frame_2 - 0.033 14.1 0.1 0.034 14.1 0.1 1.1 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) YliH PF10799.8 NODE_53277_length_332_cov_139.952862_g45352_i0forward_frame_3 - 0.028 14.3 1.4 0.041 13.8 1.4 1.2 1 0 0 1 1 1 0 Biofilm formation protein (YliH/bssR) DUF824 PF05688.11 NODE_53277_length_332_cov_139.952862_g45352_i0forward_frame_3 - 0.059 13.2 0.8 0.11 12.4 0.6 1.5 1 1 0 1 1 1 0 Salmonella repeat of unknown function (DUF824) ABATE PF07336.11 NODE_53277_length_332_cov_139.952862_g45352_i0forward_frame_3 - 0.27 11.9 14.2 0.34 11.6 14.2 1.0 1 0 0 1 1 1 0 Putative stress-induced transcription regulator MIT_LIKE_ACTX PF17556.2 NODE_53265_length_332_cov_318.296296_g45340_i0forward_frame_2 - 0.017 15.7 0.2 0.017 15.7 0.2 1.7 2 0 0 2 2 2 0 MIT-like atracotoxin family Halogen_Hydrol PF10112.9 NODE_53262_length_332_cov_646.343434_g45337_i0forward_frame_3 - 0.27 11.2 4.0 0.24 11.4 4.0 1.2 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF2207 PF09972.9 NODE_53262_length_332_cov_646.343434_g45337_i0forward_frame_3 - 2.9 6.5 7.5 2.8 6.6 7.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phenol_monoox PF04663.12 NODE_53257_length_333_cov_1.073826_g45332_i0reverse_frame_3 - 0.0036 17.4 0.4 0.0069 16.5 0.4 1.5 1 1 0 1 1 1 1 Phenol hydroxylase conserved region MgtE PF01769.16 NODE_53257_length_333_cov_1.073826_g45332_i0reverse_frame_2 - 1.1 9.7 13.1 1.4 9.3 13.1 1.1 1 0 0 1 1 1 0 Divalent cation transporter PBP1_TM PF14812.6 NODE_53257_length_333_cov_1.073826_g45332_i0forward_frame_3 - 0.0045 17.3 0.6 0.0059 17.0 0.6 1.1 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal FGGY_C PF02782.16 NODE_53252_length_333_cov_1.328859_g45327_i0forward_frame_2 - 1.7e-27 96.4 0.0 2e-27 96.2 0.0 1.0 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Defb50 PF17546.2 NODE_53249_length_333_cov_1.469799_g45324_i0reverse_frame_3 - 0.38 10.7 3.8 0.27 11.2 1.2 2.0 1 1 0 2 2 2 0 Beta defensin 50 PolC_DP2 PF03833.13 NODE_53248_length_333_cov_1.540268_g45323_i0reverse_frame_3 - 0.39 8.5 0.1 0.38 8.6 0.1 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF1438 PF07270.11 NODE_53248_length_333_cov_1.540268_g45323_i0forward_frame_2 - 0.14 12.3 2.4 0.16 12.0 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1438) CCDC24 PF15669.5 NODE_53246_length_333_cov_1.580537_g45321_i0reverse_frame_2 - 4.7 7.0 8.2 3.4 7.5 6.6 1.5 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 24 family Herpes_UL49_2 PF04823.12 NODE_53246_length_333_cov_1.580537_g45321_i0reverse_frame_2 - 5.2 7.2 10.2 2.7 8.1 7.7 1.8 1 1 1 2 2 2 0 Herpesvirus UL49 tegument protein Tlr3_TMD PF17968.1 NODE_53243_length_333_cov_1.654362_g45318_i0reverse_frame_3 - 0.29 11.3 1.6 0.62 10.3 1.6 1.6 1 0 0 1 1 1 0 Toll-like receptor 3 trans-membrane domain DUF4795 PF16043.5 NODE_53242_length_333_cov_1.681208_g45317_i0forward_frame_3 - 0.0071 16.0 0.2 0.0082 15.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) zf-HC5HC2H PF13771.6 NODE_53241_length_333_cov_1.744966_g45316_i0forward_frame_3 - 5.8e-07 29.7 2.7 1.3e-06 28.6 2.7 1.6 1 0 0 1 1 1 1 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 NODE_53241_length_333_cov_1.744966_g45316_i0forward_frame_3 - 0.00053 20.1 2.0 0.00053 20.1 2.0 1.6 2 0 0 2 2 2 1 PHD-zinc-finger like domain Sigma_reg_C PF13791.6 NODE_53241_length_333_cov_1.744966_g45316_i0forward_frame_3 - 0.01 16.1 0.3 0.011 15.9 0.3 1.1 1 0 0 1 1 1 0 Sigma factor regulator C-terminal PHD_2 PF13831.6 NODE_53241_length_333_cov_1.744966_g45316_i0forward_frame_3 - 0.25 10.9 1.4 0.3 10.7 0.1 1.8 2 0 0 2 2 2 0 PHD-finger Stealth_CR1 PF17101.5 NODE_53241_length_333_cov_1.744966_g45316_i0forward_frame_2 - 0.071 12.9 0.0 0.22 11.3 0.0 1.9 1 0 0 1 1 1 0 Stealth protein CR1, conserved region 1 Ribonuc_L-PSP PF01042.21 NODE_53239_length_333_cov_1.791946_g45314_i0reverse_frame_3 - 0.038 14.0 0.0 0.047 13.7 0.0 1.1 1 0 0 1 1 1 0 Endoribonuclease L-PSP DUF2542 PF10808.8 NODE_53236_length_333_cov_1.912752_g45311_i0forward_frame_2 - 0.093 13.2 0.1 0.13 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2542) DAHP_synth_2 PF01474.16 NODE_53235_length_333_cov_1.936242_g45310_i0reverse_frame_3 - 7e-30 103.9 0.0 7.6e-30 103.8 0.0 1.0 1 0 0 1 1 1 1 Class-II DAHP synthetase family DAGAT PF03982.13 NODE_53235_length_333_cov_1.936242_g45310_i0reverse_frame_3 - 0.1 11.5 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Diacylglycerol acyltransferase DB PF01682.19 NODE_53232_length_333_cov_2.100671_g45307_i0reverse_frame_3 - 0.053 13.8 9.0 0.039 14.2 7.2 1.7 1 1 1 2 2 2 0 DB module GUCT PF08152.12 NODE_53231_length_333_cov_2.114094_g45306_i0forward_frame_3 - 9e-05 22.7 0.2 0.00029 21.1 0.1 1.9 2 0 0 2 2 2 1 GUCT (NUC152) domain HiaBD2 PF15403.6 NODE_53231_length_333_cov_2.114094_g45306_i0forward_frame_3 - 0.0047 17.3 0.1 0.0072 16.7 0.1 1.4 1 0 0 1 1 1 1 HiaBD2_N domain of Trimeric autotransporter adhesin (GIN) DUF1672 PF07901.11 NODE_53231_length_333_cov_2.114094_g45306_i0forward_frame_2 - 0.0089 15.4 0.1 0.011 15.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1672) Dynamin_M PF01031.20 NODE_53229_length_333_cov_2.174497_g45304_i0forward_frame_2 - 2.7e-15 56.4 0.2 3e-15 56.2 0.2 1.0 1 0 0 1 1 1 1 Dynamin central region DUF5089 PF17002.5 NODE_53229_length_333_cov_2.174497_g45304_i0forward_frame_2 - 0.018 14.9 0.1 0.021 14.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5089) NADH_4Fe-4S PF10589.9 NODE_53229_length_333_cov_2.174497_g45304_i0forward_frame_2 - 0.1 12.7 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FUSC PF04632.12 NODE_53228_length_333_cov_2.221477_g45303_i0forward_frame_2 - 1.9e-26 92.8 3.7 2.3e-26 92.6 3.7 1.1 1 0 0 1 1 1 1 Fusaric acid resistance protein family FUSC_2 PF13515.6 NODE_53228_length_333_cov_2.221477_g45303_i0forward_frame_2 - 4.2e-10 39.8 1.1 5.4e-10 39.5 1.1 1.2 1 0 0 1 1 1 1 Fusaric acid resistance protein-like ArAE_1 PF06081.11 NODE_53228_length_333_cov_2.221477_g45303_i0forward_frame_2 - 0.00015 21.9 0.5 0.00019 21.6 0.5 1.1 1 0 0 1 1 1 1 Aromatic acid exporter family member 1 ALMT PF11744.8 NODE_53228_length_333_cov_2.221477_g45303_i0forward_frame_2 - 0.34 9.7 1.0 0.4 9.4 1.0 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter T-box PF00907.22 NODE_53226_length_333_cov_2.302013_g45301_i0reverse_frame_3 - 0.029 14.6 0.6 0.036 14.3 0.6 1.2 1 0 0 1 1 1 0 T-box IL17 PF06083.11 NODE_53226_length_333_cov_2.302013_g45301_i0reverse_frame_3 - 0.38 11.3 4.9 0.25 11.8 2.3 1.8 2 0 0 2 2 2 0 Interleukin-17 tify PF06200.14 NODE_53226_length_333_cov_2.302013_g45301_i0forward_frame_3 - 0.036 13.4 0.1 0.25 10.7 0.0 2.1 1 1 1 2 2 2 0 tify domain TMIE PF16038.5 NODE_53226_length_333_cov_2.302013_g45301_i0forward_frame_2 - 0.085 12.7 0.6 0.17 11.8 0.6 1.5 1 0 0 1 1 1 0 TMIE protein MerR_1 PF13411.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 6.7e-20 71.0 0.0 9.1e-20 70.5 0.0 1.2 1 0 0 1 1 1 1 MerR HTH family regulatory protein MerR PF00376.23 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 2.5e-14 52.7 0.0 4.1e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 MerR family regulatory protein HTH_17 PF12728.7 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 1.5e-06 28.3 0.1 5.7e-06 26.4 0.0 2.0 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_Tnp_1 PF01527.20 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.00025 21.3 0.1 0.00046 20.5 0.1 1.9 1 1 0 1 1 1 1 Transposase HTH_23 PF13384.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.00096 18.9 0.5 0.0077 16.0 0.0 2.4 3 0 0 3 3 3 1 Homeodomain-like domain MerR_2 PF13591.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.0013 18.5 0.0 0.0025 17.7 0.0 1.5 2 0 0 2 2 2 1 MerR HTH family regulatory protein HTH_28 PF13518.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.0027 17.8 0.1 0.017 15.2 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain Terminase_5 PF06056.12 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.0028 17.5 0.1 0.008 16.0 0.0 1.8 2 0 0 2 2 2 1 Putative ATPase subunit of terminase (gpP-like) CReP_N PF10472.9 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.02 13.8 0.0 0.022 13.6 0.0 1.0 1 0 0 1 1 1 0 eIF2-alpha phosphatase phosphorylation constitutive repressor SKA2 PF16740.5 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.024 14.4 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 HTH_Tnp_1_2 PF13022.6 NODE_53223_length_333_cov_2.426174_g45298_i0forward_frame_3 - 0.042 14.0 0.0 0.05 13.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase TT_ORF2 PF02957.15 NODE_53222_length_333_cov_2.442953_g45297_i0reverse_frame_2 - 4.9 8.1 13.4 8.3 7.4 4.2 2.1 2 0 0 2 2 2 0 TT viral ORF2 COX4_pro_2 PF07835.12 NODE_53222_length_333_cov_2.442953_g45297_i0forward_frame_3 - 0.49 10.5 4.4 7.5 6.7 0.0 2.5 2 0 0 2 2 2 0 Bacterial aa3 type cytochrome c oxidase subunit IV DUF131 PF01998.17 NODE_53222_length_333_cov_2.442953_g45297_i0forward_frame_3 - 2.3 7.9 6.6 3.3 7.4 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF131 Complex1_LYR PF05347.15 NODE_53219_length_333_cov_2.520134_g45294_i0forward_frame_3 - 0.00038 20.5 0.2 0.0022 18.0 0.1 1.9 2 0 0 2 2 2 1 Complex 1 protein (LYR family) FHIPEP PF00771.20 NODE_53218_length_333_cov_2.536913_g45293_i0reverse_frame_3 - 2.6e-66 224.5 4.6 2.8e-66 224.4 4.6 1.0 1 0 0 1 1 1 1 FHIPEP family TT_ORF2 PF02957.15 NODE_53216_length_333_cov_2.577181_g45291_i0reverse_frame_2 - 6.9 7.6 11.3 8.3 7.4 1.0 2.1 1 1 1 2 2 2 0 TT viral ORF2 HemY_N PF07219.13 NODE_53216_length_333_cov_2.577181_g45291_i0forward_frame_3 - 0.19 11.9 4.3 0.5 10.6 2.4 2.0 2 0 0 2 2 2 0 HemY protein N-terminus DUF131 PF01998.17 NODE_53216_length_333_cov_2.577181_g45291_i0forward_frame_3 - 0.26 11.0 4.8 0.37 10.5 4.8 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF131 COX4_pro_2 PF07835.12 NODE_53216_length_333_cov_2.577181_g45291_i0forward_frame_3 - 1.5 9.0 5.6 7.5 6.7 0.0 2.5 2 0 0 2 2 2 0 Bacterial aa3 type cytochrome c oxidase subunit IV SepZ PF06066.11 NODE_53215_length_333_cov_2.654362_g45290_i0reverse_frame_2 - 0.0083 16.3 0.3 0.011 15.9 0.3 1.2 1 0 0 1 1 1 1 SepZ Peptidase_C1 PF00112.23 NODE_53214_length_333_cov_2.687919_g45289_i0reverse_frame_2 - 0.18 11.9 2.8 0.19 11.8 2.8 1.1 1 0 0 1 1 1 0 Papain family cysteine protease ADD_DNMT3 PF17980.1 NODE_53214_length_333_cov_2.687919_g45289_i0reverse_frame_2 - 0.35 10.9 0.0 0.35 10.9 0.0 2.0 3 0 0 3 3 3 0 Cysteine rich ADD domain in DNMT3 UspB PF10625.9 NODE_53213_length_333_cov_2.691275_g45288_i0reverse_frame_3 - 0.0067 16.4 0.0 0.01 15.8 0.0 1.4 1 1 0 1 1 1 1 Universal stress protein B (UspB) Leu_zip PF15294.6 NODE_53211_length_333_cov_2.859060_g45286_i0forward_frame_3 - 0.017 14.6 2.1 0.021 14.3 2.1 1.0 1 0 0 1 1 1 0 Leucine zipper Flagellin_C PF00700.21 NODE_53211_length_333_cov_2.859060_g45286_i0forward_frame_3 - 0.39 11.1 2.0 4.8 7.6 0.3 2.3 1 1 0 2 2 2 0 Bacterial flagellin C-terminal helical region DNA_pol_B_2 PF03175.13 NODE_53209_length_333_cov_3.154362_g45284_i0forward_frame_2 - 4.2e-09 35.8 0.0 4.6e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral TMC PF07810.13 NODE_53207_length_333_cov_3.328859_g45282_i0forward_frame_2 - 0.11 13.0 2.3 0.075 13.6 0.6 1.5 1 1 1 2 2 2 0 TMC domain cNMP_binding PF00027.29 NODE_53205_length_333_cov_3.476510_g45280_i0forward_frame_2 - 0.0081 16.2 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain CcdA PF07362.12 NODE_53205_length_333_cov_3.476510_g45280_i0forward_frame_2 - 0.046 14.2 0.0 0.063 13.7 0.0 1.2 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA FMN_dh PF01070.18 NODE_53204_length_333_cov_3.513423_g45279_i0forward_frame_2 - 5.2e-26 91.5 0.1 5.5e-26 91.4 0.1 1.0 1 0 0 1 1 1 1 FMN-dependent dehydrogenase UPF0492 PF15744.5 NODE_53203_length_333_cov_4.171141_g45278_i0reverse_frame_2 - 0.17 11.1 0.3 0.16 11.1 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0492 SLT PF01464.20 NODE_53203_length_333_cov_4.171141_g45278_i0forward_frame_3 - 0.002 17.8 0.1 0.0031 17.1 0.1 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain EphA2_TM PF14575.6 NODE_53201_length_333_cov_26.073826_g45276_i0reverse_frame_3 - 6.6 7.7 5.3 7.6 7.5 5.3 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF2651 PF10852.8 NODE_53200_length_333_cov_37.030201_g45275_i0reverse_frame_3 - 0.12 12.9 6.9 0.3 11.7 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2651) zf-LITAF-like PF10601.9 NODE_53199_length_333_cov_37.926174_g45274_i0forward_frame_2 - 0.21 11.9 3.0 1.1 9.6 3.0 2.1 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain p12I PF12233.8 NODE_53198_length_333_cov_39.550336_g45273_i0reverse_frame_3 - 0.13 12.8 2.1 0.15 12.6 1.3 1.5 2 0 0 2 2 2 0 Human adult T cell leukemia/lymphoma virus protein Herpes_UL36 PF03586.13 NODE_53196_length_333_cov_52.030201_g45271_i0reverse_frame_2 - 0.0089 15.4 0.0 0.0097 15.3 0.0 1.1 1 0 0 1 1 1 1 Herpesvirus UL36 tegument protein LrgB PF04172.16 NODE_53196_length_333_cov_52.030201_g45271_i0forward_frame_3 - 0.11 11.9 1.7 0.12 11.9 1.7 1.0 1 0 0 1 1 1 0 LrgB-like family E_raikovi_mat PF06360.11 NODE_53196_length_333_cov_52.030201_g45271_i0forward_frame_3 - 2.1 8.8 5.6 2.3 8.7 2.9 2.2 2 0 0 2 2 2 0 Euplotes raikovi mating pheromone DUF4131 PF13567.6 NODE_53195_length_333_cov_54.325503_g45270_i0forward_frame_2 - 8.2 6.0 7.1 15 5.2 7.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Whi5 PF08528.11 NODE_53192_length_333_cov_60.902685_g45267_i0forward_frame_3 - 0.057 13.0 0.2 0.11 12.2 0.2 1.5 1 0 0 1 1 1 0 Whi5 like Ribosomal_L18 PF17135.4 NODE_53187_length_333_cov_65.788591_g45262_i0reverse_frame_2 - 0.0042 16.5 1.1 0.0042 16.5 1.1 1.4 1 1 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e TMEM43 PF07787.12 NODE_53186_length_333_cov_66.926174_g45261_i0forward_frame_2 - 0.051 13.0 1.0 0.056 12.8 1.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 SCIMP PF15050.6 NODE_53180_length_333_cov_69.456376_g45255_i0forward_frame_3 - 0.023 15.2 1.8 0.033 14.7 1.8 1.2 1 0 0 1 1 1 0 SCIMP protein Glyco_trans_1_2 PF13524.6 NODE_53171_length_333_cov_80.127517_g45246_i0reverse_frame_3 - 0.039 14.3 0.0 0.048 14.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 Peptidase_S68 PF10461.9 NODE_53171_length_333_cov_80.127517_g45246_i0reverse_frame_3 - 0.38 11.0 0.1 0.38 11.0 0.1 2.2 3 0 0 3 3 3 0 Peptidase S68 TRAM_LAG1_CLN8 PF03798.16 NODE_53171_length_333_cov_80.127517_g45246_i0forward_frame_3 - 0.96 9.1 4.8 1.1 9.0 4.8 1.3 1 1 0 1 1 1 0 TLC domain HEPPP_synt_1 PF07307.11 NODE_53169_length_333_cov_81.127517_g45244_i0forward_frame_2 - 0.15 11.6 0.1 0.18 11.4 0.1 1.1 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DUF1515 PF07439.11 NODE_53166_length_333_cov_82.322148_g45241_i0reverse_frame_2 - 0.14 12.2 1.7 0.17 11.9 1.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) Med9 PF07544.13 NODE_53158_length_333_cov_95.345638_g45233_i0reverse_frame_2 - 0.022 14.8 1.7 0.032 14.3 1.7 1.2 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 AAA_13 PF13166.6 NODE_53148_length_333_cov_138.218121_g45223_i0reverse_frame_2 - 6.7e-06 25.0 0.2 8.6e-06 24.7 0.2 1.1 1 0 0 1 1 1 1 AAA domain Orthoreo_P17 PF07272.11 NODE_53147_length_333_cov_163.630872_g45222_i0forward_frame_3 - 0.072 13.1 0.9 0.079 13.0 0.9 1.1 1 0 0 1 1 1 0 Orthoreovirus P17 protein TP2 PF01254.18 NODE_53140_length_333_cov_240.496644_g45215_i0reverse_frame_3 - 8.3 7.0 16.5 9.6 6.8 16.5 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 Resistin PF06954.11 NODE_53139_length_333_cov_256.234899_g45214_i0forward_frame_2 - 0.071 13.7 6.1 0.082 13.5 6.1 1.2 1 0 0 1 1 1 0 Resistin RasGEF_N PF00618.20 NODE_53135_length_333_cov_292.637584_g45210_i0forward_frame_3 - 0.13 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 RasGEF N-terminal motif DUF2434 PF10361.9 NODE_53135_length_333_cov_292.637584_g45210_i0forward_frame_2 - 0.0024 16.9 2.0 0.0028 16.7 2.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2434) Asp_Glu_race_2 PF14669.6 NODE_53135_length_333_cov_292.637584_g45210_i0forward_frame_2 - 0.12 12.0 0.1 0.16 11.6 0.1 1.1 1 0 0 1 1 1 0 Putative aspartate racemase DUF1173 PF06666.11 NODE_53132_length_333_cov_588.446309_g45207_i0forward_frame_2 - 0.29 10.0 2.1 0.31 9.9 1.8 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1173) Popeye PF04831.13 NODE_53129_length_333_cov_4007.218121_g45204_i0reverse_frame_3 - 1.6 8.9 8.0 2 8.6 8.0 1.2 1 0 0 1 1 1 0 Popeye protein conserved region YajC PF02699.15 NODE_53127_length_333_cov_36475.211409_g45202_i0forward_frame_2 - 4.1 7.3 8.2 10 6.1 2.4 2.1 2 0 0 2 2 2 0 Preprotein translocase subunit OAD_gamma PF04277.13 NODE_53127_length_333_cov_36475.211409_g45202_i0forward_frame_2 - 7 7.3 6.1 15 6.2 0.6 2.1 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain JTB PF05439.12 ORF97919 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) TSP9 PF11493.8 ORF97762 - 0.13 12.9 0.0 0.26 12.0 0.0 1.5 1 0 0 1 1 1 0 Thylakoid soluble phosphoprotein TSP9 UPF0561 PF10573.9 ORF96916 - 0.34 11.0 4.4 0.41 10.8 4.4 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 Kdo PF06293.14 ORF95719 - 1.1e-33 116.3 0.2 1.3e-33 116.2 0.2 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Peptidase_M9_N PF08453.10 ORF95719 - 0.054 13.2 0.0 0.12 12.1 0.0 1.6 2 0 0 2 2 2 0 Peptidase family M9 N-terminal DUF5559 PF17714.1 ORF95719 - 0.1 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5559) Rho_GDI PF02115.17 ORF95324 - 7.4e-32 110.7 0.2 8e-32 110.6 0.2 1.0 1 0 0 1 1 1 1 RHO protein GDP dissociation inhibitor Kinesin_assoc PF16183.5 ORF95324 - 0.06 13.5 0.0 0.074 13.2 0.0 1.1 1 0 0 1 1 1 0 Kinesin-associated SASRP1 PF15160.6 ORF94709 - 0.065 12.9 0.2 0.094 12.4 0.2 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 MethyltransfD12 PF02086.15 ORF94352 - 9e-21 74.7 0.0 9.9e-21 74.6 0.0 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase DUF2695 PF10905.8 ORF94352 - 0.087 13.1 0.1 0.47 10.7 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2695) DUF2684 PF10885.8 ORF93159 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) zf-UBR PF02207.20 ORF92019 - 3.8 7.8 14.8 2.1 8.5 0.1 2.6 2 1 1 3 3 3 0 Putative zinc finger in N-recognin (UBR box) zf-C2H2_jaz PF12171.8 ORF91852 - 1.4e-09 38.0 0.8 2.3e-09 37.3 0.8 1.4 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2_2 PF12756.7 ORF91852 - 0.0011 19.3 1.2 0.0017 18.7 1.1 1.3 1 1 0 1 1 1 1 C2H2 type zinc-finger (2 copies) DUF3656 PF12392.8 ORF91852 - 0.029 15.0 0.5 0.037 14.7 0.5 1.1 1 0 0 1 1 1 0 Collagenase zf-U1 PF06220.12 ORF91852 - 0.063 13.1 0.8 0.063 13.1 0.8 1.8 2 0 0 2 2 2 0 U1 zinc finger OrsD PF12013.8 ORF91852 - 0.67 10.4 5.1 0.43 11.0 0.6 2.0 1 1 1 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D IncD PF17628.2 ORF91780 - 0.067 13.0 0.8 0.094 12.5 0.3 1.4 1 1 0 1 1 1 0 Inclusion membrane protein D Membralin PF09746.9 ORF91780 - 6.1 5.8 8.8 1.8 7.5 6.5 1.3 1 1 0 1 1 1 0 Tumour-associated protein Mem_trans PF03547.18 ORF91780 - 7.5 4.8 12.5 12 4.2 12.3 1.4 1 1 0 1 1 1 0 Membrane transport protein FERM_M PF00373.18 ORF91682 - 0.15 12.5 1.2 0.21 12.0 1.2 1.3 1 0 0 1 1 1 0 FERM central domain ADAM_CR PF08516.12 ORF91218 - 0.038 14.4 1.4 0.054 13.9 1.4 1.4 1 1 0 1 1 1 0 ADAM cysteine-rich DUF3223 PF11523.8 ORF89423 - 8.7e-22 77.8 0.0 1.1e-21 77.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3223) ATP-cone PF03477.16 ORF89423 - 0.048 14.2 0.0 0.092 13.3 0.0 1.5 2 0 0 2 2 2 0 ATP cone domain PseudoU_synth_1 PF01416.20 ORF87524 - 3.6e-06 27.4 0.0 5.1e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 tRNA pseudouridine synthase V-SNARE PF05008.15 ORF87274 - 0.039 14.3 2.3 0.14 12.6 1.0 2.2 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus MFS_1 PF07690.16 ORF86035 - 0.00091 18.2 0.0 0.0013 17.7 0.0 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF2681 PF10883.8 ORF86035 - 0.098 13.1 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) CMV_US PF08001.11 ORF85979 - 0.0055 16.0 0.0 0.0057 16.0 0.0 1.1 1 0 0 1 1 1 1 CMV US L_protein_N PF15518.6 ORF85639 - 0.029 14.2 0.3 0.037 13.9 0.3 1.4 1 1 0 1 1 1 0 L protein N-terminus DUF2070 PF09843.9 ORF85469 - 2 6.6 6.0 2.2 6.5 6.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Strabismus PF06638.11 ORF85469 - 5.1 5.6 6.0 6.7 5.2 6.0 1.1 1 0 0 1 1 1 0 Strabismus protein YfhO PF09586.10 ORF85469 - 7.9 4.6 14.8 9 4.4 14.8 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Spore_III_AE PF09546.10 ORF84417 - 0.07 12.3 0.3 0.096 11.9 0.3 1.3 1 0 0 1 1 1 0 Stage III sporulation protein AE (spore_III_AE) BTHB PF18410.1 ORF83943 - 0.098 12.5 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Basic tilted helix bundle domain zinc_ribbon_12 PF11331.8 ORF83943 - 0.1 12.4 6.0 0.83 9.5 1.6 2.5 2 0 0 2 2 2 0 Probable zinc-ribbon domain AraC_binding_2 PF14525.6 ORF80389 - 0.016 14.9 0.7 0.023 14.4 0.7 1.2 1 0 0 1 1 1 0 AraC-binding-like domain DUF2684 PF10885.8 ORF80371 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) HJURP_mid PF12346.8 ORF79944 - 0.16 12.4 7.5 0.31 11.5 7.5 1.6 1 1 0 1 1 1 0 Holliday junction recognition protein-associated repeat Tlr3_TMD PF17968.1 ORF79761 - 0.13 12.5 1.5 0.29 11.4 0.8 1.9 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain RBR PF17208.3 ORF79336 - 0.073 13.8 2.0 0.098 13.4 2.0 1.2 1 0 0 1 1 1 0 RNA binding Region EF-hand_2 PF09068.11 ORF7906 - 0.005 17.0 1.1 0.006 16.7 1.1 1.2 1 0 0 1 1 1 1 EF hand AAA_24 PF13479.6 ORF7906 - 0.015 15.0 0.2 0.017 14.8 0.2 1.1 1 0 0 1 1 1 0 AAA domain PRANC PF09372.10 ORF78959 - 0.025 14.9 7.3 0.033 14.5 7.3 1.3 1 0 0 1 1 1 0 PRANC domain Gaa1 PF04114.14 ORF78654 - 4.6 6.1 11.9 4.9 6.0 11.9 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component S36_mt PF10937.8 ORF77199 - 0.028 16.0 0.1 0.16 13.6 0.1 2.1 1 1 0 1 1 1 0 Ribosomal protein S36, mitochondrial DUF4559 PF15112.6 ORF77199 - 0.06 13.0 0.0 0.069 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) DUF2684 PF10885.8 ORF76540 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) CxC5 PF18718.1 ORF75949 - 4.9 7.3 8.3 1.1 9.3 4.7 1.7 1 1 1 2 2 2 0 CxC5 like cysteine cluster associated with KDZ transposases DUF4718 PF15842.5 ORF75761 - 0.054 13.3 0.0 0.06 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) DUF5067 PF16729.5 ORF75312 - 0.19 11.7 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5067) HJURP_mid PF12346.8 ORF75303 - 0.16 12.4 7.5 0.31 11.5 7.5 1.6 1 1 0 1 1 1 0 Holliday junction recognition protein-associated repeat Spore_III_AE PF09546.10 ORF75254 - 0.07 12.3 0.3 0.096 11.9 0.3 1.3 1 0 0 1 1 1 0 Stage III sporulation protein AE (spore_III_AE) DUF1571 PF07608.11 ORF75034 - 0.1 12.0 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1571) PSRT PF07636.11 ORF74648 - 0.28 10.9 3.7 8.6 6.1 0.0 2.6 3 0 0 3 3 3 0 PSRT PHD PF00628.29 ORF73735 - 0.035 14.0 1.0 0.053 13.4 1.0 1.2 1 0 0 1 1 1 0 PHD-finger RabGAP-TBC PF00566.18 ORF72910 - 1.1e-26 93.9 1.6 1.1e-26 93.8 1.6 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain ApeA_NTD1 PF18862.1 ORF72600 - 0.028 14.0 2.3 0.034 13.7 2.3 1.1 1 0 0 1 1 1 0 ApeA N-terminal domain 1 DUF2142 PF09913.9 ORF72600 - 0.39 9.5 0.4 0.44 9.4 0.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) DAO PF01266.24 ORF69701 - 0.00046 19.9 0.0 0.00058 19.5 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Viral_Beta_CD PF04530.12 ORF68357 - 0.1 12.9 0.4 0.11 12.8 0.4 1.1 1 0 0 1 1 1 0 Viral Beta C/D like family zf-ribbon_3 PF13248.6 ORF68158 - 0.089 12.2 0.9 0.089 12.2 0.9 2.0 2 0 0 2 2 2 0 zinc-ribbon domain DUF2684 PF10885.8 ORF68149 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) DUF2684 PF10885.8 ORF66599 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) MTH865 PF07747.11 ORF65763 - 0.03 14.1 0.0 0.045 13.5 0.0 1.3 1 0 0 1 1 1 0 MTH865-like family DUF832 PF05734.11 ORF65367 - 0.36 10.3 2.0 0.48 9.9 2.0 1.2 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) NKWYS PF10364.9 ORF64687 - 0.029 14.5 0.9 0.029 14.5 0.9 2.1 1 1 1 2 2 2 0 Putative capsular polysaccharide synthesis protein LuxC PF05893.14 ORF64687 - 0.11 11.6 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) Kinesin PF00225.23 ORF64222 - 6.4e-28 97.6 0.3 7e-28 97.5 0.3 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF64222 - 2.9e-12 46.8 0.0 4e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 Microtubule binding AAA_7 PF12775.7 ORF64222 - 0.0038 16.8 0.0 0.0042 16.6 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 ORF64222 - 0.0069 16.8 0.0 0.007 16.8 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF64222 - 0.0083 16.4 0.0 0.0099 16.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain DUF87 PF01935.17 ORF64222 - 0.017 15.3 0.2 0.043 13.9 0.1 1.6 1 1 1 2 2 2 0 Helicase HerA, central domain DUF2791 PF10923.8 ORF64222 - 0.029 13.2 0.0 0.03 13.2 0.0 1.1 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) AAA_30 PF13604.6 ORF64222 - 0.042 13.6 0.0 0.064 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF64222 - 0.054 13.9 0.1 0.068 13.6 0.1 1.3 1 1 0 1 1 1 0 RNA helicase AbrB-like PF14250.6 ORF61642 - 0.16 12.1 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 AbrB-like transcriptional regulator DUF3874 PF12990.7 ORF61339 - 0.1 12.9 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknonw function from B. Theta Gene description (DUF3874) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks241.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks241.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks241.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks241.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2684 PF10885.8 ORF59993 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Gag_p10 PF02337.17 ORF59885 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein TPP_enzyme_C PF02775.21 ORF59663 - 1e-09 38.3 0.0 1.3e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MTH865 PF07747.11 ORF59663 - 0.17 11.7 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 MTH865-like family PSRT PF07636.11 ORF59045 - 0.28 10.9 3.7 8.6 6.1 0.0 2.6 3 0 0 3 3 3 0 PSRT DUF1298 PF06974.13 ORF58957 - 4.1e-16 59.2 0.0 4.8e-16 59.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) PduV-EutP PF10662.9 ORF58437 - 0.054 13.2 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation CSN8_PSD8_EIF3K PF10075.9 ORF57022 - 0.13 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 CSN8/PSMD8/EIF3K family BRCA2 PF00634.18 ORF56883 - 1.5 8.5 3.9 0.46 10.2 0.8 1.9 2 1 0 2 2 2 0 BRCA2 repeat DUF4250 PF14056.6 ORF56797 - 0.063 13.2 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) DUF5300 PF17224.3 ORF56681 - 0.053 13.8 1.2 0.074 13.3 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5300) Methyltransf_4 PF02390.17 ORF56681 - 1.1 8.7 6.5 0.081 12.4 1.1 1.8 1 1 0 2 2 2 0 Putative methyltransferase Gag_p10 PF02337.17 ORF55250 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein Gag_p10 PF02337.17 ORF55205 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein LMBR1 PF04791.16 ORF55167 - 2.7 6.8 4.0 2.5 6.9 4.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein EamA PF00892.20 ORF53951 - 0.0068 16.6 0.1 0.01 16.0 0.1 1.2 1 0 0 1 1 1 1 EamA-like transporter family DUF5527 PF17665.1 ORF52498 - 0.045 13.3 0.5 0.045 13.3 0.5 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5527) CRIC_ras_sig PF10534.9 ORF52353 - 0.09 13.0 0.0 0.12 12.6 0.0 1.5 1 1 0 1 1 1 0 Connector enhancer of kinase suppressor of ras Ustilago_mating PF05722.12 ORF51923 - 0.072 12.6 0.1 0.085 12.4 0.1 1.1 1 0 0 1 1 1 0 Ustilago B locus mating-type protein Actin PF00022.19 ORF51573 - 3.7e-21 75.2 0.0 4e-21 75.1 0.0 1.0 1 0 0 1 1 1 1 Actin HSP70 PF00012.20 ORF51573 - 0.28 9.3 0.0 0.34 9.0 0.0 1.1 1 0 0 1 1 1 0 Hsp70 protein DUF5418 PF17439.2 ORF51312 - 0.071 13.2 0.6 0.087 12.9 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5418) DUF2684 PF10885.8 ORF50697 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Herpes_UL6 PF01763.16 ORF49900 - 0.0034 16.0 0.8 0.0035 15.9 0.8 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like DUF445 PF04286.12 ORF49900 - 0.0051 16.7 0.7 0.006 16.4 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF445) DUF842 PF05811.13 ORF49900 - 0.012 15.4 1.3 0.016 14.9 0.7 1.5 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) DUF3877 PF12993.7 ORF49900 - 0.027 14.3 1.5 0.33 10.8 1.5 2.0 1 1 0 1 1 1 0 Domain of unknown function, E. rectale Gene description (DUF3877) TraH PF06122.11 ORF49900 - 0.1 11.9 0.5 0.12 11.6 0.5 1.1 1 0 0 1 1 1 0 Conjugative relaxosome accessory transposon protein Cep3 PF16846.5 ORF47796 - 0.0077 14.8 0.6 0.0085 14.6 0.6 1.0 1 0 0 1 1 1 1 Centromere DNA-binding protein complex CBF3 subunit B YabA PF06156.13 ORF47796 - 0.037 14.6 0.7 0.056 14.1 0.1 1.6 2 0 0 2 2 2 0 Initiation control protein YabA Gag_p10 PF02337.17 ORF46820 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein Ldt_C PF17969.1 ORF46231 - 2.4e-25 89.0 0.4 3.1e-25 88.7 0.4 1.1 1 0 0 1 1 1 1 L,D-transpeptidase C-terminal domain YkuD PF03734.14 ORF46231 - 1.5e-06 28.7 0.0 2.3e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain DAGK_cat PF00781.24 ORF45357 - 2.7e-11 43.2 0.0 3.1e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain ShK PF01549.24 ORF45299 - 0.48 11.0 11.5 1 10.0 4.3 2.9 2 1 0 2 2 2 0 ShK domain-like Inhibitor_I66 PF16850.5 ORF4507 - 0.13 12.1 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase inhibitor I66 Gag_p10 PF02337.17 ORF4228 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein Lactamase_B PF00753.27 ORF39375 - 0.024 14.6 0.9 0.026 14.5 0.9 1.2 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily Inhibitor_I78 PF11720.8 ORF37627 - 0.06 13.4 0.0 0.084 12.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase inhibitor I78 family Chordopox_A13L PF05961.11 ORF37150 - 0.15 12.3 2.4 0.26 11.5 2.4 1.5 1 1 0 1 1 1 0 Chordopoxvirus A13L protein DUF2207 PF09972.9 ORF37150 - 0.69 8.6 3.2 0.76 8.5 3.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ndc1_Nup PF09531.10 ORF37150 - 3.9 6.1 7.9 4 6.0 7.9 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DPM3 PF08285.11 ORF37150 - 7.4 6.8 7.0 11 6.2 7.0 1.2 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) HA PF03457.14 ORF36858 - 0.072 13.4 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Helicase associated domain DUF4710 PF15828.5 ORF36858 - 1.5 9.0 9.4 1.6 8.9 5.5 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4710) DUF3961 PF13106.6 ORF36748 - 0.024 14.3 0.6 0.04 13.6 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3961) Gyro_capsid PF04162.12 ORF34013 - 0.24 9.8 7.0 0.047 12.2 3.7 1.4 1 1 0 1 1 1 0 Gyrovirus capsid protein (VP1) ABC2_membrane PF01061.24 ORF33514 - 0.052 13.0 10.3 0.061 12.7 10.3 1.0 1 0 0 1 1 1 0 ABC-2 type transporter GDA1_CD39 PF01150.17 ORF32589 - 5.3e-06 25.4 0.0 6e-06 25.2 0.0 1.0 1 0 0 1 1 1 1 GDA1/CD39 (nucleoside phosphatase) family DUF2684 PF10885.8 ORF31301 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) PduV-EutP PF10662.9 ORF30707 - 0.054 13.2 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation HMG_box PF00505.19 ORF30525 - 7.5e-05 23.1 0.0 0.00011 22.5 0.0 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF30525 - 0.0024 18.4 0.1 0.0042 17.6 0.0 1.4 1 1 0 1 1 1 1 HMG-box domain Gag_p10 PF02337.17 ORF29745 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein KASH PF10541.9 ORF29280 - 0.003 17.8 0.3 0.006 16.8 0.3 1.6 1 0 0 1 1 1 1 Nuclear envelope localisation domain ERAP1_C PF11838.8 ORF28534 - 0.0072 15.9 0.1 0.0078 15.8 0.1 1.1 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Gag_p10 PF02337.17 ORF27258 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein DUF4768 PF15989.5 ORF27129 - 0.043 13.7 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) TetR_C_3 PF08362.11 ORF27129 - 0.17 11.8 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 YcdC-like protein, C-terminal region MSL1_dimer PF16801.5 ORF26607 - 0.0056 16.4 2.7 0.0089 15.8 2.7 1.2 1 0 0 1 1 1 1 Dimerisation domain of Male-specific-Lethal 1 DUF2684 PF10885.8 ORF26435 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Dicty_spore_N PF04562.12 ORF24079 - 0.2 12.4 4.6 0.25 12.1 4.6 1.3 1 1 0 1 1 1 0 Dictyostelium spore coat protein, N terminus Phage_holin_7_1 PF16081.5 ORF230 - 0.033 14.4 0.5 0.048 13.8 0.5 1.2 1 0 0 1 1 1 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family Gag_p10 PF02337.17 ORF22406 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein KNTase_C PF07827.11 ORF22168 - 0.27 11.0 1.2 0.81 9.5 0.7 1.8 1 1 1 2 2 2 0 KNTase C-terminal domain FoP_duplication PF13865.6 ORF22040 - 7.7 7.2 9.1 12 6.6 9.1 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 Nucleos_tra2_N PF01773.20 ORF21736 - 0.013 16.1 0.1 1.5 9.4 0.0 2.1 2 0 0 2 2 2 0 Na+ dependent nucleoside transporter N-terminus IBV_3A PF03617.13 ORF19580 - 1 9.4 5.4 0.22 11.5 1.4 2.0 2 0 0 2 2 2 0 IBV 3A protein Gag_p10 PF02337.17 ORF19054 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein MCLC PF05934.11 ORF18258 - 1.7 7.3 13.5 1.9 7.1 13.5 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) SAT PF16073.5 ORF18014 - 0.033 13.9 0.1 0.039 13.7 0.1 1.1 1 0 0 1 1 1 0 Starter unit:ACP transacylase in aflatoxin biosynthesis FRG1 PF06229.12 ORF1772 - 0.047 13.4 0.1 0.054 13.2 0.1 1.1 1 0 0 1 1 1 0 FRG1-like domain GMP_PDE_delta PF05351.11 ORF1688 - 7.9e-20 71.5 0.0 9.9e-20 71.2 0.0 1.1 1 0 0 1 1 1 1 GMP-PDE, delta subunit DUF4870 PF09685.10 ORF16798 - 0.16 12.1 5.0 0.22 11.7 5.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4870) zf-PHD-like PF15446.6 ORF16028 - 0.0017 18.0 2.9 0.0019 17.8 2.9 1.0 1 0 0 1 1 1 1 PHD/FYVE-zinc-finger like domain SNAD4 PF18750.1 ORF153024 - 0.17 12.0 0.5 0.23 11.6 0.5 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC4_like PF18774.1 ORF153024 - 0.19 11.7 0.3 0.26 11.2 0.3 1.2 1 0 0 1 1 1 0 APOBEC4-like -AID/APOBEC-deaminase BAR_3 PF16746.5 ORF152534 - 0.0059 16.3 4.6 0.0064 16.2 4.6 1.1 1 0 0 1 1 1 1 BAR domain of APPL family EB1 PF03271.17 ORF152534 - 0.0071 16.6 0.2 0.0071 16.6 0.2 2.2 2 0 0 2 2 2 1 EB1-like C-terminal motif TRPM_tetra PF16519.5 ORF152534 - 0.016 15.3 4.2 0.037 14.1 4.2 1.6 1 0 0 1 1 1 0 Tetramerisation domain of TRPM DUF4404 PF14357.6 ORF152534 - 0.03 15.0 6.7 0.038 14.6 6.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) SCF PF02404.15 ORF152534 - 0.061 12.7 1.1 0.06 12.7 1.1 1.1 1 0 0 1 1 1 0 Stem cell factor DUF1664 PF07889.12 ORF152534 - 0.22 11.6 4.7 0.28 11.2 4.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Exonuc_VII_L PF02601.15 ORF152534 - 0.81 9.2 4.7 0.84 9.1 4.7 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Tweety PF04906.13 ORF152534 - 1.1 7.9 4.1 1.2 7.7 4.1 1.0 1 0 0 1 1 1 0 Tweety ApoLp-III PF07464.11 ORF152305 - 0.14 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) 7TM_GPCR_Srz PF10325.9 ORF152218 - 0.025 13.9 9.5 0.028 13.8 9.5 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srz DUF2614 PF11023.8 ORF152218 - 0.16 12.1 4.8 0.21 11.7 4.8 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain CLN3 PF02487.17 ORF151486 - 0.45 9.5 5.7 0.46 9.5 5.7 1.1 1 0 0 1 1 1 0 CLN3 protein CENP-T_C PF15511.6 ORF150899 - 2.1e-07 31.0 0.0 2.6e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF150899 - 3.4e-05 24.0 0.0 4.5e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF150899 - 0.0002 21.5 0.1 0.00035 20.7 0.0 1.5 1 1 0 1 1 1 1 TATA box binding protein associated factor (TAF) Histone PF00125.24 ORF150899 - 0.0034 17.8 0.2 0.0041 17.5 0.2 1.3 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 ORF150899 - 0.0067 16.8 0.0 0.0094 16.3 0.0 1.4 1 1 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 ORF150899 - 0.018 15.1 0.0 0.022 14.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF150899 - 0.039 14.5 0.0 0.056 13.9 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 ORF150899 - 0.18 11.8 0.0 0.24 11.5 0.0 1.2 1 0 0 1 1 1 0 Bromodomain associated Fungal_trans PF04082.18 ORF150257 - 0.051 12.6 0.9 0.053 12.5 0.9 1.2 1 1 0 1 1 1 0 Fungal specific transcription factor domain ABC2_membrane PF01061.24 ORF149741 - 0.018 14.4 8.9 0.021 14.2 8.9 1.0 1 0 0 1 1 1 0 ABC-2 type transporter Cyt-b5 PF00173.28 ORF149181 - 7.5e-20 70.9 0.0 1e-19 70.4 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain SOCS_box PF07525.16 ORF148730 - 9.5 6.7 7.7 19 5.7 3.5 2.7 2 0 0 2 2 2 0 SOCS box SecG PF03840.14 ORF147658 - 2.3e-21 75.6 12.0 2.8e-21 75.4 12.0 1.1 1 0 0 1 1 1 1 Preprotein translocase SecG subunit DUF4870 PF09685.10 ORF147658 - 0.065 13.3 0.4 0.11 12.6 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4870) PulG PF11773.8 ORF147658 - 0.081 12.8 0.4 0.15 11.9 0.0 1.6 2 0 0 2 2 2 0 Type II secretory pathway pseudopilin DUF2684 PF10885.8 ORF147254 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) CLN3 PF02487.17 ORF145368 - 0.45 9.5 5.7 0.46 9.5 5.7 1.1 1 0 0 1 1 1 0 CLN3 protein CusF_Ec PF11604.8 ORF145336 - 1.1e-21 76.6 0.2 1.4e-21 76.2 0.2 1.2 1 0 0 1 1 1 1 Copper binding periplasmic protein CusF OapA PF04225.12 ORF145336 - 0.09 12.9 0.1 0.29 11.3 0.0 1.7 2 0 0 2 2 2 0 Opacity-associated protein A LysM-like domain LysR_substrate PF03466.20 ORF145191 - 3.2e-12 46.3 0.0 3.6e-12 46.1 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain DUF5554 PF17709.1 ORF145191 - 0.13 12.4 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5554) RNA_POL_M_15KD PF02150.16 ORF144895 - 0.031 14.1 0.4 0.06 13.2 0.4 1.4 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit Phage_holin_7_1 PF16081.5 ORF144420 - 0.033 14.4 0.5 0.048 13.8 0.5 1.2 1 0 0 1 1 1 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family MSL2-CXC PF16682.5 ORF14146 - 0.065 13.4 1.0 0.065 13.4 1.0 2.1 1 1 1 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Complex1_LYR_2 PF13233.6 ORF140688 - 1.1e-13 51.8 1.7 1.4e-13 51.4 1.7 1.2 1 1 0 1 1 1 1 Complex1_LYR-like Complex1_LYR PF05347.15 ORF140688 - 1.8e-07 31.1 0.1 3.1e-07 30.3 0.1 1.4 1 0 0 1 1 1 1 Complex 1 protein (LYR family) DUF3945 PF13101.6 ORF140688 - 0.0048 16.6 0.2 0.0071 16.0 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3945) DUF2684 PF10885.8 ORF140311 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Gag_p10 PF02337.17 ORF139556 - 0.019 14.9 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Retroviral GAG p10 protein tRNA_bind PF01588.20 ORF136514 - 1.5e-31 108.3 0.5 1.7e-31 108.2 0.5 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain DUF4421 PF14391.6 ORF135632 - 0.12 11.8 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4421) DUF2684 PF10885.8 ORF135592 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Cys_Knot_tox PF17486.2 ORF134808 - 0.57 10.4 6.2 2.2 8.5 2.3 2.2 2 0 0 2 2 2 0 Cystine knot toxins CD20 PF04103.15 ORF134770 - 0.019 15.0 1.3 0.024 14.8 1.3 1.1 1 0 0 1 1 1 0 CD20-like family Fe-S_biosyn PF01521.20 ORF134770 - 0.067 13.4 1.0 0.087 13.0 1.0 1.1 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis DUF2701 PF10857.8 ORF132975 - 0.019 15.0 3.3 0.019 15.0 3.3 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2701) MORN PF02493.20 ORF132464 - 6.4e-06 25.8 16.2 8.6e-05 22.2 2.6 4.1 4 0 0 4 4 4 2 MORN repeat Mito_carr PF00153.27 ORF131547 - 3.1e-16 59.1 0.5 2.6e-13 49.7 0.1 2.0 1 1 1 2 2 2 2 Mitochondrial carrier protein DUF4212 PF13937.6 ORF131547 - 0.024 15.0 1.3 0.04 14.3 1.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4212) AsmA_1 PF13109.6 ORF131535 - 0.024 14.1 0.1 0.028 13.9 0.1 1.1 1 0 0 1 1 1 0 AsmA-like C-terminal region ADAM_CR_2 PF17771.1 ORF126220 - 0.55 10.8 11.2 0.37 11.3 7.2 2.4 1 1 2 3 3 3 0 ADAM cysteine-rich domain DUF5570 PF17731.1 ORF126217 - 0.065 13.3 0.8 0.082 13.0 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5570) DUF543 PF04418.12 ORF126217 - 0.082 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF543) ADP_ribosyl_GH PF03747.14 ORF125847 - 0.079 12.7 0.1 0.097 12.4 0.1 1.1 1 0 0 1 1 1 0 ADP-ribosylglycohydrolase Prenyltrans PF00432.21 ORF125744 - 0.5 10.2 2.5 0.87 9.4 1.6 1.9 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat CG-1 PF03859.16 ORF125397 - 0.17 11.6 1.9 0.28 11.0 1.9 1.3 1 0 0 1 1 1 0 CG-1 domain DUF3134 PF11332.8 ORF124986 - 0.22 11.8 0.0 0.37 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3134) DUF2684 PF10885.8 ORF124776 - 0.027 14.6 0.9 0.055 13.6 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) DNA_binding_2 PF13724.6 ORF124175 - 0.13 12.7 0.8 17 5.9 0.0 2.3 2 0 0 2 2 2 0 DNA-binding domain ERAP1_C PF11838.8 ORF12371 - 0.0072 15.9 0.1 0.0078 15.8 0.1 1.1 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Alpha-amylase_C PF02806.18 ORF123059 - 3.6e-09 37.0 0.0 4.7e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain HZS_alpha PF18582.1 ORF123059 - 0.062 13.8 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 Hydrazine synthase alpha subunit middle domain DUF3099 PF11298.8 ORF121513 - 1.6 8.9 4.9 11 6.2 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3099) Gyro_capsid PF04162.12 ORF120351 - 0.96 7.9 10.1 1.1 7.6 10.1 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) Blo-t-5 PF11642.8 ORF118826 - 0.0024 17.8 0.1 0.0037 17.2 0.1 1.3 1 0 0 1 1 1 1 Mite allergen Blo t 5 Molybdop_Fe4S4 PF04879.16 ORF118816 - 1.4 8.9 6.1 0.63 10.1 0.2 2.5 2 1 1 3 3 3 0 Molybdopterin oxidoreductase Fe4S4 domain Kinesin PF00225.23 ORF118751 - 2.1e-26 92.7 4.6 2.4e-26 92.5 4.6 1.0 1 0 0 1 1 1 1 Kinesin motor domain Lactamase_B PF00753.27 ORF118721 - 0.024 14.6 0.9 0.026 14.5 0.9 1.2 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily YjhX_toxin PF09857.9 ORF1177 - 9.7e-37 124.8 0.3 1.2e-36 124.6 0.3 1.1 1 0 0 1 1 1 1 Putative toxin of bacterial toxin-antitoxin pair Cyt-b5 PF00173.28 ORF117699 - 5.2e-22 77.8 0.0 5.9e-22 77.6 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Hat1_N PF10394.9 ORF116470 - 2.2e-14 54.0 0.0 3.1e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus DAGK_cat PF00781.24 ORF115951 - 2.7e-11 43.2 0.0 3.1e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Prok-RING_2 PF14445.6 ORF115855 - 0.02 15.0 0.5 0.033 14.4 0.5 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 SH PF01445.17 ORF115855 - 0.28 11.2 0.8 0.47 10.5 0.8 1.3 1 0 0 1 1 1 0 Viral small hydrophobic protein Tsc35 PF15079.6 ORF115551 - 1.5 8.4 4.3 0.33 10.5 1.3 1.4 1 1 0 1 1 1 0 Testis-specific protein 35 DUF4870 PF09685.10 ORF115183 - 0.16 12.1 5.0 0.22 11.7 5.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4870) Inhibitor_I78 PF11720.8 ORF114577 - 0.059 13.4 0.1 0.095 12.8 0.1 1.3 1 0 0 1 1 1 0 Peptidase inhibitor I78 family Spheroidin PF05541.12 ORF114056 - 0.0051 14.7 0.1 0.0052 14.7 0.1 1.1 1 0 0 1 1 1 1 Entomopoxvirus spheroidin protein Pho86 PF11124.8 ORF114056 - 0.0092 15.5 1.7 0.011 15.3 1.7 1.1 1 0 0 1 1 1 1 Inorganic phosphate transporter Pho86 Ank_2 PF12796.7 ORF109702 - 1.3e-14 54.6 0.0 2.1e-06 28.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF109702 - 5e-13 49.3 0.0 4.7e-06 27.0 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF109702 - 1.2e-11 44.5 0.0 0.024 15.1 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF109702 - 1.6e-10 41.0 0.1 1e-06 28.9 0.0 3.4 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF109702 - 2.4e-10 39.7 0.0 0.066 13.8 0.0 4.1 4 0 0 4 4 4 3 Ankyrin repeat Dicty_spore_N PF04562.12 ORF1092 - 0.2 12.4 4.6 0.25 12.1 4.6 1.3 1 1 0 1 1 1 0 Dictyostelium spore coat protein, N terminus Keratin_B2_2 PF13885.6 ORF109049 - 2.9 7.9 19.6 1.6 8.7 2.8 2.5 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein DUF2070 PF09843.9 ORF105915 - 2 6.6 6.0 2.2 6.5 6.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Strabismus PF06638.11 ORF105915 - 5.1 5.6 6.0 6.7 5.2 6.0 1.1 1 0 0 1 1 1 0 Strabismus protein YfhO PF09586.10 ORF105915 - 7.9 4.6 14.8 9 4.4 14.8 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO PTS_EIIA_1 PF00358.20 ORF105546 - 7.9e-32 109.7 0.2 9.3e-32 109.5 0.2 1.1 1 0 0 1 1 1 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Biotin_lipoyl_2 PF13533.6 ORF105546 - 0.04 13.8 0.0 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 Biotin-lipoyl like TMEM215 PF15746.5 ORF102624 - 0.037 13.5 0.1 0.049 13.1 0.1 1.2 1 0 0 1 1 1 0 TMEM215 family Hrs_helical PF12210.8 ORF102624 - 0.12 12.9 3.2 0.15 12.6 1.1 1.9 1 1 1 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate DUF4047 PF13256.6 ORF102624 - 0.9 9.7 5.4 3.4 7.9 5.4 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4047) CHASE7 PF17151.4 ORF100949 - 0.16 11.5 1.8 0.3 10.7 0.6 1.7 1 1 1 2 2 2 0 Periplasmic sensor domain Myb_DNA-binding PF00249.31 ORF100890 - 3.5e-17 62.3 6.2 1.1e-15 57.5 0.4 2.6 3 0 0 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF100890 - 7.5e-14 51.7 2.3 5.2e-13 49.0 0.1 2.0 2 0 0 2 2 2 1 Myb-like DNA-binding domain SLIDE PF09111.10 ORF100890 - 0.00017 21.6 0.5 0.00032 20.7 0.4 1.4 2 0 0 2 2 2 1 SLIDE Rap1_C PF11626.8 ORF100890 - 0.022 14.8 1.6 1.3 9.1 0.5 2.3 1 1 1 2 2 2 0 TRF2-interacting telomeric protein/Rap1 - C terminal domain CD36 PF01130.21 ORF100736 - 0.098 11.2 0.1 0.098 11.2 0.1 1.1 1 0 0 1 1 1 0 CD36 family RVT_1 PF00078.27 NODE_54042_length_325_cov_1.110345_g46112_i0forward_frame_1 - 0.0089 15.6 0.0 0.01 15.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) UL41A PF17591.2 NODE_54038_length_325_cov_1.417241_g46108_i0reverse_frame_1 - 0.1 12.7 6.6 0.22 11.7 1.4 2.2 2 0 0 2 2 2 0 Herpesvirus UL41A DASH_Dad3 PF08656.10 NODE_54038_length_325_cov_1.417241_g46108_i0forward_frame_1 - 0.36 10.9 3.6 11 6.2 3.6 2.5 1 1 0 1 1 1 0 DASH complex subunit Dad3 Med4 PF10018.9 NODE_54038_length_325_cov_1.417241_g46108_i0forward_frame_1 - 0.46 10.1 3.2 0.57 9.8 3.2 1.1 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 WD40 PF00400.32 NODE_54026_length_325_cov_1.986207_g46096_i0forward_frame_1 - 0.0098 16.7 1.2 0.44 11.5 0.2 2.7 3 0 0 3 3 3 1 WD domain, G-beta repeat eIF2A PF08662.11 NODE_54026_length_325_cov_1.986207_g46096_i0forward_frame_1 - 0.011 15.7 0.1 0.02 14.8 0.1 1.6 1 1 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A ANAPC4_WD40 PF12894.7 NODE_54026_length_325_cov_1.986207_g46096_i0forward_frame_1 - 0.017 15.4 0.1 0.15 12.4 0.1 2.2 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain UvrB_inter PF17757.1 NODE_54026_length_325_cov_1.986207_g46096_i0forward_frame_1 - 0.1 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 UvrB interaction domain AID PF18767.1 NODE_54023_length_325_cov_2.113793_g46093_i0reverse_frame_1 - 8.5 6.5 6.8 7.2 6.7 2.1 2.3 2 0 0 2 2 2 0 Activation induced deaminase BAH PF01426.18 NODE_54015_length_325_cov_2.568966_g46085_i0forward_frame_1 - 8e-10 38.6 0.0 1e-09 38.3 0.0 1.1 1 0 0 1 1 1 1 BAH domain DUF1967 PF09269.11 NODE_54015_length_325_cov_2.568966_g46085_i0forward_frame_1 - 0.024 14.6 0.0 0.045 13.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) DUF3961 PF13106.6 NODE_54013_length_325_cov_2.651724_g46083_i0reverse_frame_1 - 0.28 10.9 1.2 16 5.2 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3961) EAL PF00563.20 NODE_54011_length_325_cov_2.727586_g46081_i0forward_frame_1 - 3e-18 66.2 0.0 3.5e-18 66.0 0.0 1.0 1 0 0 1 1 1 1 EAL domain PH_16 PF17838.1 NODE_54011_length_325_cov_2.727586_g46081_i0forward_frame_1 - 0.13 12.1 0.0 9.6 6.1 0.0 2.0 1 1 1 2 2 2 0 PH domain CheY-binding PF09078.11 NODE_54006_length_325_cov_3.003448_g46076_i0reverse_frame_1 - 1.4e-19 69.9 0.8 2e-19 69.4 0.8 1.2 1 0 0 1 1 1 1 CheY binding rve PF00665.26 NODE_54001_length_325_cov_4.896552_g46071_i0forward_frame_1 - 0.015 15.5 0.0 0.018 15.2 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain Mt_ATP_synt PF15704.5 NODE_54001_length_325_cov_4.896552_g46071_i0forward_frame_1 - 0.11 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase subunit SLR1-BP PF07333.12 NODE_53999_length_325_cov_7.362069_g46069_i0reverse_frame_1 - 5.5 7.5 12.8 4.7 7.7 10.1 2.2 2 1 0 2 2 2 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) DUF1883 PF08980.10 NODE_53996_length_325_cov_10.475862_g46066_i0reverse_frame_1 - 0.023 14.6 0.1 1.2 9.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1883) CSRNP_N PF16019.5 NODE_53996_length_325_cov_10.475862_g46066_i0reverse_frame_1 - 0.15 11.9 0.0 8 6.3 0.0 2.0 1 1 1 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus DUF5373 PF17343.2 NODE_53992_length_325_cov_48.358621_g46062_i0reverse_frame_1 - 0.75 9.6 9.0 0.91 9.3 9.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5373) Pep1_7 PF17232.2 NODE_53991_length_325_cov_49.027586_g46061_i0forward_frame_1 - 0.065 13.7 0.1 0.11 13.0 0.1 1.3 1 0 0 1 1 1 0 Elicitor peptide 1-7 U-box PF04564.15 NODE_53980_length_325_cov_65.806897_g46050_i0reverse_frame_1 - 2.6e-05 24.3 0.1 3.5e-05 23.9 0.1 1.3 1 1 0 1 1 1 1 U-box domain Blt1 PF12754.7 NODE_53979_length_325_cov_66.303448_g46049_i0reverse_frame_1 - 0.2 12.0 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 Blt1 N-terminal domain GSIII_N PF12437.8 NODE_53969_length_325_cov_87.127586_g46039_i0reverse_frame_1 - 0.01 15.5 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 Glutamine synthetase type III N terminal DUF3443 PF11925.8 NODE_53969_length_325_cov_87.127586_g46039_i0reverse_frame_1 - 0.047 12.5 0.0 0.055 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3443) p47_phox_C PF08944.11 NODE_53967_length_325_cov_96.741379_g46037_i0forward_frame_1 - 0.17 11.3 3.6 2.3 7.7 0.0 3.1 3 0 0 3 3 3 0 NADPH oxidase subunit p47Phox, C terminal domain DUF4359 PF14271.6 NODE_53960_length_325_cov_150.282759_g46030_i0reverse_frame_1 - 0.076 13.8 3.3 0.19 12.5 3.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4359) Bac_export_2 PF01312.19 NODE_53960_length_325_cov_150.282759_g46030_i0forward_frame_1 - 0.26 10.5 5.3 0.3 10.2 5.3 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family DUF2070 PF09843.9 NODE_53960_length_325_cov_150.282759_g46030_i0forward_frame_1 - 8 4.6 16.6 9.4 4.4 16.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Herpes_UL56 PF04534.12 NODE_53959_length_325_cov_170.182759_g46029_i0reverse_frame_1 - 0.059 12.8 0.1 0.066 12.7 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus UL56 protein PRT_C PF08372.10 NODE_53959_length_325_cov_170.182759_g46029_i0reverse_frame_1 - 0.08 12.7 0.0 0.097 12.4 0.0 1.1 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal DUF3123 PF11321.8 NODE_53956_length_325_cov_268.275862_g46026_i0reverse_frame_1 - 0.1 13.3 0.2 0.14 12.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3123) YMF19 PF02326.15 NODE_53956_length_325_cov_268.275862_g46026_i0forward_frame_1 - 0.029 15.2 1.4 0.039 14.7 1.4 1.4 1 1 0 1 1 1 0 Plant ATP synthase F0 Metallothi_Euk2 PF12809.7 NODE_53941_length_326_cov_1.202749_g46012_i0forward_frame_1 - 3.9 7.8 9.6 0.52 10.6 4.5 2.2 2 1 0 2 2 2 0 Eukaryotic metallothionein Cys_knot PF00007.22 NODE_53939_length_326_cov_1.463918_g46010_i0forward_frame_1 - 0.058 13.7 6.8 0.057 13.7 2.7 2.0 2 0 0 2 2 2 0 Cystine-knot domain MLANA PF14991.6 NODE_53937_length_326_cov_1.532646_g46008_i0reverse_frame_1 - 0.15 12.4 0.9 0.22 11.8 0.6 1.4 2 0 0 2 2 2 0 Protein melan-A IPK PF03770.16 NODE_53933_length_326_cov_1.738832_g46004_i0forward_frame_1 - 0.026 14.4 0.6 0.031 14.1 0.6 1.2 1 0 0 1 1 1 0 Inositol polyphosphate kinase STAG PF08514.11 NODE_53932_length_326_cov_1.749141_g46003_i0reverse_frame_1 - 0.76 9.7 4.2 2 8.4 0.3 2.1 1 1 1 2 2 2 0 STAG domain Trypan_PARP PF05887.11 NODE_53930_length_326_cov_1.828179_g46001_i0reverse_frame_1 - 0.07 13.1 25.3 14 5.7 25.3 2.1 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Serglycin PF04360.12 NODE_53930_length_326_cov_1.828179_g46001_i0forward_frame_1 - 4.1 7.4 9.4 0.37 10.7 3.4 2.1 2 0 0 2 2 2 0 Serglycin Chordopox_G3 PF06129.12 NODE_53929_length_326_cov_1.835052_g46000_i0reverse_frame_1 - 0.0098 16.6 0.4 0.016 15.9 0.4 1.3 1 0 0 1 1 1 1 Chordopoxvirus G3 protein AAT PF03417.16 NODE_53919_length_326_cov_2.484536_g45990_i0forward_frame_1 - 0.12 12.1 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase PPL4 PF18188.1 NODE_53914_length_326_cov_2.573883_g45985_i0reverse_frame_1 - 0.03 14.3 0.3 0.037 14.0 0.3 1.1 1 0 0 1 1 1 0 Prim-pol 4 LSR PF05624.14 NODE_53913_length_326_cov_2.604811_g45984_i0forward_frame_1 - 0.1 12.6 0.2 0.1 12.6 0.2 2.0 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) WCCH PF03716.14 NODE_53911_length_326_cov_2.683849_g45982_i0forward_frame_1 - 0.076 12.7 5.7 0.18 11.5 5.7 1.6 1 0 0 1 1 1 0 WCCH motif HECA PF15353.6 NODE_53910_length_326_cov_2.711340_g45981_i0forward_frame_1 - 0.0042 17.3 0.0 0.0071 16.6 0.0 1.3 1 1 0 1 1 1 1 Headcase protein family homologue WD40 PF00400.32 NODE_53909_length_326_cov_2.914089_g45980_i0reverse_frame_1 - 0.015 16.1 0.0 0.032 15.1 0.0 1.6 1 0 0 1 1 1 0 WD domain, G-beta repeat DUF5617 PF18493.1 NODE_53896_length_326_cov_58.140893_g45967_i0reverse_frame_1 - 0.035 14.2 0.3 0.061 13.4 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) Nexin_C PF08628.12 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_1 - 0.0042 17.6 1.0 0.0083 16.7 1.0 1.4 1 1 0 1 1 1 1 Sorting nexin C terminal NNMT_PNMT_TEMT PF01234.17 NODE_53891_length_326_cov_64.756014_g45962_i0forward_frame_1 - 0.12 11.6 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family HSF_DNA-bind PF00447.17 NODE_53890_length_326_cov_64.824742_g45961_i0forward_frame_1 - 0.099 13.3 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 HSF-type DNA-binding Tachystatin_B PF11478.8 NODE_53885_length_326_cov_72.213058_g45956_i0reverse_frame_1 - 0.12 12.4 2.2 1.2 9.2 0.4 2.4 2 0 0 2 2 2 0 Antimicrobial chitin binding protein tachystatin B NAD_binding_10 PF13460.6 NODE_53877_length_326_cov_84.243986_g45948_i0forward_frame_1 - 0.054 13.4 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H-binding DUF1658 PF07871.11 NODE_53868_length_326_cov_98.213058_g45939_i0forward_frame_1 - 6.8 6.8 9.6 1.9 8.5 5.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) SPDY PF03771.16 NODE_53867_length_326_cov_98.759450_g45938_i0reverse_frame_1 - 0.027 14.4 3.4 2.5 8.1 2.8 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF317) DUF5423 PF17461.2 NODE_53861_length_326_cov_126.292096_g45932_i0reverse_frame_1 - 0.15 10.9 0.4 0.19 10.6 0.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Herpes_LAMP2 PF06126.11 NODE_53861_length_326_cov_126.292096_g45932_i0reverse_frame_1 - 0.6 8.7 6.9 0.68 8.5 6.9 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 UbiA PF01040.18 NODE_53861_length_326_cov_126.292096_g45932_i0reverse_frame_1 - 0.76 9.0 6.2 0.92 8.8 6.2 1.1 1 0 0 1 1 1 0 UbiA prenyltransferase family Pkinase PF00069.25 NODE_53861_length_326_cov_126.292096_g45932_i0forward_frame_1 - 8e-06 25.4 0.0 9.5e-06 25.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain RCC1_2 PF13540.6 NODE_53856_length_326_cov_145.996564_g45927_i0reverse_frame_1 - 0.0007 19.3 1.8 0.43 10.4 0.0 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF959 PF06121.14 NODE_53854_length_326_cov_152.945017_g45925_i0reverse_frame_1 - 0.19 11.9 1.2 0.26 11.5 1.2 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF959) Herpes_US9 PF06072.11 NODE_53852_length_326_cov_176.192440_g45923_i0reverse_frame_1 - 3.6 7.5 9.2 0.33 10.9 3.8 2.0 2 1 0 2 2 2 0 Alphaherpesvirus tegument protein US9 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks242.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks242.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks242.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks242.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ABC_tran PF00005.27 NODE_53850_length_326_cov_273.305842_g45921_i0reverse_frame_1 - 3.4e-05 24.4 0.6 6.4e-05 23.5 0.3 1.6 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 NODE_53850_length_326_cov_273.305842_g45921_i0reverse_frame_1 - 0.0018 17.8 0.6 0.0024 17.3 0.6 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 NODE_53846_length_326_cov_451.419244_g45917_i0forward_frame_1 - 3.4e-05 24.4 0.6 6.4e-05 23.5 0.3 1.6 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 NODE_53846_length_326_cov_451.419244_g45917_i0forward_frame_1 - 0.0015 18.0 0.6 0.0021 17.5 0.6 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Pkinase PF00069.25 NODE_53834_length_327_cov_1.657534_g45905_i0reverse_frame_1 - 5.1e-33 114.6 0.1 5.9e-33 114.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_53834_length_327_cov_1.657534_g45905_i0reverse_frame_1 - 6.6e-15 55.1 0.0 7.2e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_53834_length_327_cov_1.657534_g45905_i0reverse_frame_1 - 0.08 12.3 0.2 0.095 12.0 0.2 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 NODE_53834_length_327_cov_1.657534_g45905_i0reverse_frame_1 - 0.095 12.3 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 NODE_53834_length_327_cov_1.657534_g45905_i0reverse_frame_1 - 0.27 11.1 0.0 0.32 10.9 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family IpaB_EvcA PF03278.13 NODE_53834_length_327_cov_1.657534_g45905_i0forward_frame_1 - 0.057 13.1 0.0 0.059 13.1 0.0 1.2 1 0 0 1 1 1 0 IpaB/EvcA family PP2C PF00481.21 NODE_53831_length_327_cov_1.815068_g45902_i0forward_frame_1 - 1.2e-24 87.4 0.0 1.2e-24 87.3 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C zf-tcix PF14952.6 NODE_53828_length_327_cov_1.863014_g45899_i0reverse_frame_1 - 0.0091 15.6 1.9 0.021 14.5 0.6 2.2 2 0 0 2 2 2 1 Putative treble-clef, zinc-finger, Zn-binding PKHD_C PF18331.1 NODE_53825_length_327_cov_1.931507_g45896_i0forward_frame_1 - 2.1e-19 69.3 0.2 3e-19 68.8 0.2 1.2 1 0 0 1 1 1 1 PKHD-type hydroxylase C-terminal domain MOR2-PAG1_N PF14222.6 NODE_53825_length_327_cov_1.931507_g45896_i0forward_frame_1 - 0.093 11.7 0.1 0.11 11.4 0.1 1.0 1 0 0 1 1 1 0 Cell morphogenesis N-terminal SLC35F PF06027.12 NODE_53823_length_327_cov_1.993151_g45894_i0reverse_frame_1 - 0.0021 17.7 0.7 0.003 17.1 0.7 1.2 1 0 0 1 1 1 1 Solute carrier family 35 CENP-F_leu_zip PF10473.9 NODE_53821_length_327_cov_2.037671_g45892_i0reverse_frame_1 - 0.021 14.9 4.0 0.031 14.3 3.9 1.5 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI3K_P85_iSH2 PF16454.5 NODE_53821_length_327_cov_2.037671_g45892_i0reverse_frame_1 - 0.047 13.3 1.6 0.06 12.9 1.6 1.2 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4061 PF13270.6 NODE_53821_length_327_cov_2.037671_g45892_i0reverse_frame_1 - 0.092 13.1 0.6 0.14 12.4 0.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4061) HALZ PF02183.18 NODE_53821_length_327_cov_2.037671_g45892_i0reverse_frame_1 - 0.13 12.6 0.2 0.13 12.6 0.2 2.1 3 0 0 3 3 3 0 Homeobox associated leucine zipper V_ATPase_I PF01496.19 NODE_53820_length_327_cov_2.041096_g45891_i0reverse_frame_1 - 1.2e-32 112.9 0.5 1.3e-32 112.7 0.5 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family HTH_Tnp_ISL3 PF13542.6 NODE_53820_length_327_cov_2.041096_g45891_i0forward_frame_1 - 0.17 11.3 0.0 0.31 10.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Pentapeptide_4 PF13599.6 NODE_53819_length_327_cov_2.099315_g45890_i0reverse_frame_1 - 0.00041 20.5 1.4 0.00068 19.8 1.4 1.3 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) Pentapeptide PF00805.22 NODE_53819_length_327_cov_2.099315_g45890_i0reverse_frame_1 - 0.0044 16.6 2.7 0.62 9.8 0.4 2.3 2 0 0 2 2 2 2 Pentapeptide repeats (8 copies) Chaperone_III PF07824.12 NODE_53819_length_327_cov_2.099315_g45890_i0reverse_frame_1 - 0.09 13.0 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Type III secretion chaperone domain RabGAP-TBC PF00566.18 NODE_53813_length_327_cov_2.188356_g45884_i0forward_frame_1 - 0.0017 18.1 1.6 0.0026 17.5 1.6 1.4 1 1 0 1 1 1 1 Rab-GTPase-TBC domain Sulfotransfer_4 PF17784.1 NODE_53813_length_327_cov_2.188356_g45884_i0forward_frame_1 - 0.0094 15.8 0.2 0.012 15.5 0.2 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Inhibitor_I10 PF12559.8 NODE_53812_length_327_cov_2.256849_g45883_i0forward_frame_1 - 0.097 12.9 0.1 0.17 12.2 0.1 1.5 1 0 0 1 1 1 0 Serine endopeptidase inhibitors RVT_1 PF00078.27 NODE_53811_length_327_cov_2.445205_g45882_i0forward_frame_1 - 1.1e-05 25.0 0.0 0.00021 20.9 0.0 2.0 1 1 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF1664 PF07889.12 NODE_53811_length_327_cov_2.445205_g45882_i0forward_frame_1 - 0.23 11.5 0.0 0.33 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Casc1 PF12366.8 NODE_53806_length_327_cov_2.561644_g45877_i0forward_frame_1 - 0.052 13.1 0.2 0.057 12.9 0.2 1.1 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 RVT_1 PF00078.27 NODE_53801_length_327_cov_2.787671_g45872_i0reverse_frame_1 - 5.8e-09 35.8 0.0 6.4e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4536 PF15055.6 NODE_53800_length_327_cov_2.859589_g45871_i0forward_frame_1 - 0.29 11.4 5.3 0.57 10.5 5.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4536) Cellulose_synt PF03552.14 NODE_53800_length_327_cov_2.859589_g45871_i0forward_frame_1 - 0.58 8.6 4.8 0.65 8.4 4.8 1.0 1 0 0 1 1 1 0 Cellulose synthase DUF2207 PF09972.9 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 0.064 12.0 4.2 0.068 11.9 4.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phlebovirus_G1 PF07243.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 0.12 10.7 9.5 0.13 10.6 9.5 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 FA_desaturase PF00487.24 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 0.51 10.1 3.2 0.58 10.0 3.2 1.1 1 0 0 1 1 1 0 Fatty acid desaturase MMPL PF03176.15 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 0.54 9.1 19.4 0.69 8.8 19.4 1.1 1 0 0 1 1 1 0 MMPL family DUF1700 PF08006.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 1.2 8.6 12.3 1.7 8.1 12.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF4191 PF13829.6 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 2.4 7.4 14.5 3.1 7.1 14.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) LMF1 PF06762.14 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 3.9 6.5 10.9 4.3 6.3 10.9 1.0 1 0 0 1 1 1 0 Lipase maturation factor DUF1129 PF06570.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 4.5 6.7 11.1 5.8 6.3 11.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) AC_N PF16214.5 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_1 - 9 5.3 14.7 9.7 5.2 14.7 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF1040 PF06288.13 NODE_53794_length_327_cov_3.448630_g45865_i0forward_frame_1 - 0.00031 21.1 0.0 0.00041 20.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) PriCT_1 PF08708.11 NODE_53792_length_327_cov_3.565068_g45863_i0forward_frame_1 - 0.039 13.7 0.2 0.063 13.0 0.2 1.3 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) Exc PF07825.11 NODE_53791_length_327_cov_3.839041_g45862_i0reverse_frame_1 - 0.049 13.6 0.5 0.11 12.4 0.5 1.6 1 0 0 1 1 1 0 Excisionase-like protein DHHC PF01529.20 NODE_53788_length_327_cov_4.390411_g45859_i0forward_frame_1 - 4.3e-29 101.3 8.4 4.8e-29 101.2 8.4 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase Spt4 PF06093.13 NODE_53788_length_327_cov_4.390411_g45859_i0forward_frame_1 - 0.2 11.8 5.4 0.26 11.4 5.4 1.2 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger ADAM_CR_2 PF17771.1 NODE_53786_length_327_cov_4.914384_g45857_i0forward_frame_1 - 0.65 10.6 5.0 2.5 8.7 0.6 2.1 2 0 0 2 2 2 0 ADAM cysteine-rich domain EF-hand_6 PF13405.6 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.00027 20.6 0.5 0.00058 19.6 0.5 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.00053 20.4 0.2 0.00079 19.8 0.2 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.0007 19.0 1.5 0.0013 18.1 1.5 1.5 1 0 0 1 1 1 1 EF hand SPARC_Ca_bdg PF10591.9 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.0019 18.5 0.4 0.0026 18.1 0.4 1.2 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_5 PF13202.6 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_1 - 0.0044 16.4 1.7 0.008 15.6 1.7 1.4 1 0 0 1 1 1 1 EF hand PP_kinase PF02503.17 NODE_53780_length_327_cov_42.712329_g45851_i0reverse_frame_1 - 0.0039 16.8 0.0 0.005 16.5 0.0 1.1 1 0 0 1 1 1 1 Polyphosphate kinase middle domain MbeD_MobD PF04899.12 NODE_53774_length_327_cov_54.523973_g45845_i0forward_frame_1 - 0.64 10.2 4.8 2.3 8.4 1.1 2.9 1 1 1 2 2 2 0 MbeD/MobD like M PF02370.16 NODE_53774_length_327_cov_54.523973_g45845_i0forward_frame_1 - 6.7 7.6 8.5 11 7.0 0.2 3.7 3 0 0 3 3 3 0 M protein repeat Squash PF00299.18 NODE_53772_length_327_cov_61.308219_g45843_i0forward_frame_1 - 0.05 13.6 2.4 0.088 12.8 2.4 1.4 1 0 0 1 1 1 0 Squash family serine protease inhibitor DUF982 PF06169.12 NODE_53765_length_327_cov_67.465753_g45836_i0forward_frame_1 - 0.071 13.2 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF982) MatE PF01554.18 NODE_53764_length_327_cov_68.280822_g45835_i0forward_frame_1 - 0.12 12.0 0.3 0.16 11.6 0.3 1.1 1 0 0 1 1 1 0 MatE partial_CstF PF15861.5 NODE_53761_length_327_cov_72.893836_g45832_i0forward_frame_1 - 0.033 14.0 0.1 0.045 13.5 0.1 1.2 1 0 0 1 1 1 0 Partial cleavage stimulation factor domain RRXRR PF14239.6 NODE_53757_length_327_cov_80.438356_g45828_i0reverse_frame_1 - 0.2 11.5 2.6 0.27 11.1 2.6 1.1 1 0 0 1 1 1 0 RRXRR protein Aspzincin_M35 PF14521.6 NODE_53757_length_327_cov_80.438356_g45828_i0forward_frame_1 - 0.13 12.8 0.2 0.17 12.4 0.2 1.1 1 0 0 1 1 1 0 Lysine-specific metallo-endopeptidase ImpE PF07024.13 NODE_53756_length_327_cov_85.455479_g45827_i0reverse_frame_1 - 0.035 14.2 0.0 0.046 13.8 0.0 1.1 1 0 0 1 1 1 0 ImpE protein MyTH4 PF00784.17 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_1 - 0.00069 20.1 4.4 0.28 11.7 0.1 2.6 2 1 1 3 3 3 2 MyTH4 domain DUF3864 PF12980.7 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_1 - 0.46 10.8 4.8 4.9 7.5 0.3 3.0 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3864) DUF4416 PF14385.6 NODE_53750_length_327_cov_103.119863_g45821_i0forward_frame_1 - 0.019 14.9 2.9 0.023 14.6 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4416) Glucos_trans_II PF14264.6 NODE_53750_length_327_cov_103.119863_g45821_i0forward_frame_1 - 0.079 12.3 4.8 0.088 12.1 4.8 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII RLAN PF14401.6 NODE_53745_length_327_cov_113.657534_g45816_i0reverse_frame_1 - 0.15 11.7 0.0 0.16 11.6 0.0 1.3 1 1 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain YafQ_toxin PF15738.5 NODE_53745_length_327_cov_113.657534_g45816_i0forward_frame_1 - 0.087 13.1 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin of type II toxin-antitoxin system, YafQ DUF5397 PF17375.2 NODE_53740_length_327_cov_198.794521_g45811_i0reverse_frame_1 - 0.2 11.4 0.0 0.3 10.9 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5397) CAP_N PF01213.19 NODE_53734_length_327_cov_245.157534_g45805_i0forward_frame_1 - 0.41 10.1 6.4 0.45 9.9 6.4 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal IBB PF01749.20 NODE_53731_length_327_cov_306.801370_g45802_i0reverse_frame_1 - 0.094 13.2 2.8 0.16 12.4 2.8 1.3 1 0 0 1 1 1 0 Importin beta binding domain Ribosomal_S14 PF00253.21 NODE_53724_length_327_cov_4089.599315_g45796_i0forward_frame_1 - 2.9e-11 42.9 4.2 4.4e-11 42.4 1.5 2.0 1 1 1 2 2 2 1 Ribosomal protein S14p/S29e Baculo_LEF-11 PF06385.12 NODE_53718_length_328_cov_1.276451_g45790_i0forward_frame_2 - 0.0069 16.9 1.2 0.0085 16.6 0.9 1.4 1 1 0 1 1 1 1 Baculovirus LEF-11 protein ABC_tran PF00005.27 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 2.7e-08 34.4 0.0 3.3e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.002 17.8 0.0 0.0032 17.2 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.0025 17.7 0.0 0.0027 17.7 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_15 PF13175.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.0041 16.9 0.1 0.0044 16.8 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.0079 16.1 0.0 0.0088 16.0 0.0 1.1 1 0 0 1 1 1 1 NACHT domain AAA_23 PF13476.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.0082 16.7 0.0 0.0087 16.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain IIGP PF05049.13 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.012 14.7 0.0 0.016 14.3 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA PF00004.29 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.014 15.8 0.0 0.016 15.7 0.0 1.1 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.018 14.8 0.0 0.02 14.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Mg_chelatase PF01078.21 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.028 13.8 0.0 0.035 13.5 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.028 13.9 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region DLIC PF05783.11 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.071 11.9 0.0 0.08 11.8 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_22 PF13401.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.076 13.3 0.0 0.086 13.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.078 12.6 0.0 0.095 12.3 0.0 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.084 13.2 0.0 0.084 13.2 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.092 13.1 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_5 PF07728.14 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.095 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.11 12.6 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.16 12.0 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.17 11.6 0.1 0.26 11.0 0.1 1.3 1 1 0 1 1 1 0 AAA domain DUF815 PF05673.13 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.17 11.0 0.0 0.19 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Roc PF08477.13 NODE_53716_length_328_cov_1.358362_g45788_i0forward_frame_2 - 0.22 11.8 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase APC_u14 PF16635.5 NODE_53712_length_328_cov_1.406143_g45784_i0reverse_frame_3 - 0.44 11.1 10.1 0.54 10.8 9.3 1.7 1 1 1 2 2 2 0 Unstructured region on APC between SAMP and APC_crr CAML PF14963.6 NODE_53712_length_328_cov_1.406143_g45784_i0reverse_frame_3 - 1.4 9.0 4.9 1.5 8.9 4.9 1.0 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand DUF3963 PF13124.6 NODE_53710_length_328_cov_1.467577_g45782_i0forward_frame_2 - 0.02 14.9 0.8 0.31 11.0 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3963) UvrD_C PF13361.6 NODE_53709_length_328_cov_1.481229_g45781_i0forward_frame_2 - 0.1 12.0 0.6 0.11 11.8 0.6 1.0 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain Cys_rich_KTR PF14205.6 NODE_53708_length_328_cov_1.556314_g45780_i0forward_frame_3 - 0.012 15.4 0.5 0.028 14.2 0.5 1.6 1 0 0 1 1 1 0 Cysteine-rich KTR cNMP_binding PF00027.29 NODE_53708_length_328_cov_1.556314_g45780_i0forward_frame_2 - 0.00015 21.8 0.0 0.008 16.2 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain LXG PF04740.12 NODE_53707_length_328_cov_1.597270_g45779_i0reverse_frame_2 - 0.0062 16.3 2.5 0.0076 16.0 2.5 1.0 1 0 0 1 1 1 1 LXG domain of WXG superfamily Sugar_tr PF00083.24 NODE_53700_length_328_cov_1.781570_g45772_i0forward_frame_2 - 2.4e-09 36.6 1.4 2.5e-09 36.5 1.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter WYL_2 PF10902.8 NODE_53696_length_328_cov_1.843003_g45768_i0forward_frame_2 - 0.0091 16.3 0.2 0.013 15.8 0.2 1.2 1 0 0 1 1 1 1 WYL_2, Sm-like SH3 beta-barrel fold EppA_BapA PF07268.11 NODE_53696_length_328_cov_1.843003_g45768_i0forward_frame_2 - 0.038 13.9 0.0 0.051 13.5 0.0 1.3 1 0 0 1 1 1 0 Exported protein precursor (EppA/BapA) MFS_1 PF07690.16 NODE_53694_length_328_cov_1.877133_g45766_i0forward_frame_2 - 0.0017 17.4 11.4 0.0021 17.0 11.4 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily PGP_phosphatase PF09419.10 NODE_53687_length_328_cov_2.208191_g45759_i0reverse_frame_3 - 0.056 13.1 0.0 0.068 12.8 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase PABP PF00658.18 NODE_53686_length_328_cov_2.215017_g45758_i0reverse_frame_3 - 0.0098 16.1 0.0 0.016 15.3 0.0 1.3 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain Nup188 PF10487.9 NODE_53686_length_328_cov_2.215017_g45758_i0reverse_frame_2 - 0.0018 16.3 0.7 0.0019 16.2 0.7 1.0 1 0 0 1 1 1 1 Nucleoporin subcomplex protein binding to Pom34 Inhibitor_I67 PF11405.8 NODE_53686_length_328_cov_2.215017_g45758_i0reverse_frame_2 - 0.068 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Bromelain inhibitor VI Fer4_2 PF12797.7 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.0034 17.4 3.7 0.0055 16.7 3.7 1.3 1 0 0 1 1 1 1 4Fe-4S binding domain Molydop_binding PF01568.21 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.0035 17.4 0.0 0.013 15.5 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Fer4 PF00037.27 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.0051 16.6 4.4 0.0077 16.0 4.4 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_10 PF13237.6 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.03 14.5 4.0 0.058 13.5 4.0 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.043 13.9 4.3 0.065 13.3 4.3 1.3 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_8 PF13183.6 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.15 12.5 4.2 0.2 12.1 4.2 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 0.31 11.7 6.0 1.3 9.7 6.2 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_53681_length_328_cov_2.337884_g45753_i0reverse_frame_3 - 1.7 9.3 6.6 2.8 8.7 6.6 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain CAAX_1 PF15895.5 NODE_53681_length_328_cov_2.337884_g45753_i0forward_frame_2 - 0.16 11.9 9.5 0.2 11.5 9.5 1.2 1 0 0 1 1 1 0 CAAX box cerebral protein 1 TPR_2 PF07719.17 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 1.1e-16 59.5 0.3 4.1e-05 23.4 0.3 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 2.1e-16 58.9 1.3 1.3e-05 24.8 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 5e-12 45.0 3.5 0.0026 17.9 0.1 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 7.5e-10 39.3 0.1 3.5e-07 30.8 0.1 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 2.2e-08 34.2 2.5 0.014 16.0 0.3 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 4.7e-08 32.5 1.3 0.22 11.6 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 9.6e-08 31.6 3.5 0.011 15.4 0.3 3.3 1 1 2 3 3 3 2 TPR repeat TPR_12 PF13424.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 1.6e-05 25.1 0.1 0.015 15.6 0.1 2.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 1.9e-05 24.7 1.7 0.00013 22.1 0.2 2.7 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 2e-05 25.0 1.4 0.00082 19.8 0.8 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 3e-05 24.1 0.0 0.00077 19.6 0.0 2.2 1 1 1 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 0.00012 22.3 0.2 0.00018 21.7 0.2 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 MIT PF04212.18 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 0.00038 20.5 1.7 0.35 11.0 0.0 3.3 2 1 1 3 3 3 1 MIT (microtubule interacting and transport) domain TPR_14 PF13428.6 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 0.0019 18.8 0.0 2 9.4 0.0 2.9 2 1 1 3 3 3 2 Tetratricopeptide repeat DUF3808 PF10300.9 NODE_53677_length_328_cov_2.593857_g45749_i0reverse_frame_2 - 0.0023 16.8 0.2 0.0031 16.3 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3808) DcuC PF03606.15 NODE_53676_length_328_cov_2.655290_g45748_i0forward_frame_2 - 3.7e-26 91.6 9.7 4e-26 91.5 9.7 1.0 1 0 0 1 1 1 1 C4-dicarboxylate anaerobic carrier DUF4932 PF16286.5 NODE_53674_length_328_cov_2.863481_g45746_i0forward_frame_2 - 0.34 10.1 4.1 0.39 9.9 4.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4932) SCA7 PF08313.12 NODE_53673_length_328_cov_2.887372_g45745_i0forward_frame_3 - 0.014 15.3 0.7 0.025 14.5 0.7 1.4 1 0 0 1 1 1 0 SCA7, zinc-binding domain Doppel PF11466.8 NODE_53668_length_328_cov_3.232082_g45740_i0forward_frame_2 - 0.069 12.8 1.0 0.13 12.0 1.0 1.4 1 0 0 1 1 1 0 Prion-like protein Doppel FRG1 PF06229.12 NODE_53668_length_328_cov_3.232082_g45740_i0forward_frame_2 - 0.2 11.3 0.0 0.26 11.0 0.0 1.1 1 0 0 1 1 1 0 FRG1-like domain zf-C2H2_10 PF16588.5 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_3 - 0.053 13.3 6.6 0.087 12.6 6.6 1.3 1 0 0 1 1 1 0 C2H2 zinc-finger CobA_CobO_BtuR PF02572.15 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_3 - 0.16 12.2 0.9 0.16 12.2 0.9 3.0 3 1 0 3 3 3 0 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP zf-CCHC PF00098.23 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_3 - 0.24 11.5 6.8 0.39 10.9 6.8 1.4 1 0 0 1 1 1 0 Zinc knuckle Ribosomal_S8e PF01201.22 NODE_53667_length_328_cov_3.522184_g45739_i0reverse_frame_2 - 3.8 7.7 7.4 4.2 7.5 7.4 1.2 1 0 0 1 1 1 0 Ribosomal protein S8e TMEMspv1-c74-12 PF11044.8 NODE_53667_length_328_cov_3.522184_g45739_i0forward_frame_2 - 4 7.5 3.9 0.95 9.5 0.3 1.7 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF2457 PF10446.9 NODE_53666_length_328_cov_3.795222_g45738_i0forward_frame_2 - 0.25 10.5 6.4 0.24 10.5 6.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF4834 PF16118.5 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_2 - 0.013 16.4 1.9 0.018 16.0 1.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_2 - 0.9 10.5 8.5 1.9 9.4 8.5 1.8 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain GBV-C_env PF12786.7 NODE_53662_length_328_cov_4.976109_g45734_i0reverse_frame_2 - 9.6 4.8 7.7 11 4.6 7.7 1.1 1 0 0 1 1 1 0 GB virus C genotype envelope DUF4400 PF14348.6 NODE_53662_length_328_cov_4.976109_g45734_i0forward_frame_3 - 0.0098 15.4 1.7 0.016 14.8 1.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4400) BatD PF13584.6 NODE_53662_length_328_cov_4.976109_g45734_i0forward_frame_3 - 0.031 13.1 0.1 0.047 12.5 0.1 1.3 1 0 0 1 1 1 0 Oxygen tolerance vMSA PF00695.19 NODE_53662_length_328_cov_4.976109_g45734_i0forward_frame_3 - 0.044 12.9 6.4 0.062 12.4 6.4 1.3 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Orf78 PF06024.12 NODE_53662_length_328_cov_4.976109_g45734_i0forward_frame_3 - 0.48 10.7 8.3 1.3 9.4 8.3 1.7 1 1 0 1 1 1 0 Orf78 (ac78) DUF2321 PF10083.9 NODE_53661_length_328_cov_5.928328_g45733_i0reverse_frame_2 - 0.036 13.7 0.1 0.053 13.1 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) DUF3849 PF12960.7 NODE_53654_length_328_cov_59.119454_g45726_i0reverse_frame_2 - 0.013 15.5 0.6 0.026 14.5 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3849) LptF_LptG PF03739.14 NODE_53652_length_328_cov_61.894198_g45724_i0reverse_frame_3 - 3.3 6.4 5.3 3.9 6.2 5.3 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG GBP_C PF02841.14 NODE_53652_length_328_cov_61.894198_g45724_i0forward_frame_2 - 0.0088 15.5 3.9 0.01 15.2 3.9 1.2 1 1 0 1 1 1 1 Guanylate-binding protein, C-terminal domain DHR10 PF18595.1 NODE_53651_length_328_cov_62.174061_g45723_i0reverse_frame_3 - 0.0046 17.0 2.3 0.0089 16.1 2.0 1.7 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain BRCT_assoc PF12820.7 NODE_53651_length_328_cov_62.174061_g45723_i0reverse_frame_3 - 0.0072 16.2 3.2 0.0078 16.0 3.2 1.1 1 0 0 1 1 1 1 Serine-rich domain associated with BRCT APG17 PF04108.12 NODE_53651_length_328_cov_62.174061_g45723_i0reverse_frame_3 - 0.0078 15.4 2.1 0.0087 15.2 2.1 1.1 1 0 0 1 1 1 1 Autophagy protein Apg17 HIPIP PF01355.17 NODE_53651_length_328_cov_62.174061_g45723_i0reverse_frame_2 - 0.014 15.8 2.5 0.024 15.0 2.5 1.5 1 0 0 1 1 1 0 High potential iron-sulfur protein LktC PF06261.11 NODE_53650_length_328_cov_65.460751_g45722_i0reverse_frame_2 - 0.053 13.4 0.0 0.063 13.2 0.0 1.2 1 0 0 1 1 1 0 Actinobacillus actinomycetemcomitans leukotoxin activator LktC His_Me_b4a2 PF18275.1 NODE_53646_length_328_cov_72.583618_g45718_i0forward_frame_2 - 0.14 12.3 1.1 0.24 11.5 1.1 1.4 1 0 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain zf-dskA_traR PF01258.17 NODE_53641_length_328_cov_80.668942_g45713_i0forward_frame_2 - 1.6 8.7 5.9 0.65 10.0 1.4 2.4 2 1 1 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger DUF1878 PF08963.10 NODE_53635_length_328_cov_92.590444_g45707_i0forward_frame_3 - 0.0047 17.4 0.1 0.0064 17.0 0.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1878) CCDC-167 PF15188.6 NODE_53635_length_328_cov_92.590444_g45707_i0forward_frame_2 - 0.063 13.6 1.6 0.078 13.3 1.6 1.4 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 CagY_I PF14585.6 NODE_53635_length_328_cov_92.590444_g45707_i0forward_frame_2 - 0.64 10.2 7.6 0.13 12.3 2.3 2.0 1 1 1 2 2 2 0 CagY type 1 repeat CAP_N PF01213.19 NODE_53632_length_328_cov_99.412969_g45705_i0reverse_frame_3 - 0.23 10.9 3.6 0.28 10.6 3.6 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF1481 PF07356.12 NODE_53631_length_328_cov_114.051195_g45704_i0forward_frame_2 - 0.069 12.9 1.1 0.077 12.7 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1481) 3-alpha PF03475.14 NODE_53622_length_328_cov_143.443686_g45695_i0forward_frame_3 - 0.099 12.5 0.1 0.18 11.7 0.1 1.4 1 0 0 1 1 1 0 3-alpha domain Herpes_capsid PF06112.11 NODE_53611_length_328_cov_426.020478_g45684_i0forward_frame_2 - 3.8 7.6 9.5 4.6 7.3 9.5 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein COX7B PF05392.11 NODE_53609_length_328_cov_599.689420_g45682_i0reverse_frame_2 - 0.1 12.3 0.1 0.2 11.3 0.0 1.4 1 1 0 1 1 1 0 Cytochrome C oxidase chain VIIB DUF4781 PF16013.5 NODE_53598_length_329_cov_1.714286_g45671_i0forward_frame_2 - 0.11 11.3 0.9 0.15 10.8 0.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4781) PapD_N PF00345.20 NODE_53596_length_329_cov_1.795918_g45669_i0reverse_frame_2 - 3e-10 40.1 0.1 4e-10 39.7 0.1 1.2 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PsaF PF17550.2 NODE_53593_length_329_cov_1.952381_g45666_i0reverse_frame_2 - 0.042 13.4 0.0 0.048 13.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function Jnk-SapK_ap_N PF09744.9 NODE_53591_length_329_cov_2.040816_g45664_i0reverse_frame_3 - 0.0081 16.4 3.5 0.011 15.9 3.5 1.2 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 MtrA PF04208.14 NODE_53591_length_329_cov_2.040816_g45664_i0reverse_frame_3 - 0.059 13.0 0.2 0.067 12.8 0.2 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit A MapZ_EC1 PF18041.1 NODE_53591_length_329_cov_2.040816_g45664_i0reverse_frame_3 - 0.5 10.6 8.5 3.2 8.0 7.9 2.0 1 1 0 1 1 1 0 MapZ extracellular domain 1 FliD_N PF02465.18 NODE_53591_length_329_cov_2.040816_g45664_i0reverse_frame_3 - 2.8 8.7 5.8 8.5 7.2 1.6 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus HMW1C_N PF18071.1 NODE_53591_length_329_cov_2.040816_g45664_i0forward_frame_2 - 0.08 12.8 0.7 0.1 12.4 0.7 1.2 1 0 0 1 1 1 0 HMW1C N-terminal YfzA PF14118.6 NODE_53590_length_329_cov_2.061224_g45663_i0reverse_frame_2 - 0.016 15.6 0.1 0.025 15.0 0.1 1.4 1 0 0 1 1 1 0 YfzA-like protein FAD_binding_2 PF00890.24 NODE_53588_length_329_cov_2.132653_g45661_i0reverse_frame_3 - 0.0027 16.8 0.1 0.057 12.5 0.0 2.0 1 1 1 2 2 2 2 FAD binding domain Pyr_redox PF00070.27 NODE_53588_length_329_cov_2.132653_g45661_i0reverse_frame_3 - 0.017 15.6 0.0 0.95 10.1 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 NODE_53588_length_329_cov_2.132653_g45661_i0reverse_frame_3 - 0.027 14.1 0.0 0.027 14.1 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 NODE_53588_length_329_cov_2.132653_g45661_i0reverse_frame_3 - 0.053 12.8 0.0 0.055 12.7 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain DUF678 PF05077.12 NODE_53588_length_329_cov_2.132653_g45661_i0forward_frame_2 - 6 7.1 13.7 0.067 13.3 4.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF678) Dpy19 PF10034.9 NODE_53587_length_329_cov_2.173469_g45660_i0forward_frame_2 - 0.0008 17.7 1.1 0.0008 17.7 1.1 1.0 1 0 0 1 1 1 1 Q-cell neuroblast polarisation DUF2204 PF09970.9 NODE_53587_length_329_cov_2.173469_g45660_i0forward_frame_2 - 0.079 12.6 0.1 0.084 12.5 0.1 1.1 1 0 0 1 1 1 0 Nucleotidyl transferase of unknown function (DUF2204) AAA_12 PF13087.6 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.021 14.5 1.1 0.029 14.0 1.1 1.2 1 0 0 1 1 1 0 AAA domain PCEMA1 PF07418.11 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.11 12.0 8.4 0.13 11.8 8.4 1.0 1 0 0 1 1 1 0 Acidic phosphoprotein precursor PCEMA1 Presenilin PF01080.17 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.15 10.8 4.0 0.17 10.6 4.0 1.0 1 0 0 1 1 1 0 Presenilin BIV_Env PF05858.12 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.17 10.1 0.7 0.2 9.8 0.7 1.0 1 0 0 1 1 1 0 Bovine immunodeficiency virus surface protein (SU) V_ATPase_I PF01496.19 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.34 8.8 6.9 0.4 8.5 6.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4407 PF14362.6 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 0.7 9.2 5.7 0.82 9.0 5.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) LCD1 PF09798.9 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 2.6 6.5 13.4 3.1 6.2 13.4 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein Sec62 PF03839.16 NODE_53586_length_329_cov_2.221088_g45659_i0reverse_frame_2 - 4.6 6.7 8.9 5.9 6.3 8.9 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 SAYSvFN PF10260.9 NODE_53585_length_329_cov_2.244898_g45658_i0forward_frame_3 - 0.025 14.5 0.0 0.044 13.7 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved domain (SAYSvFN) GWT1 PF06423.12 NODE_53581_length_329_cov_2.408163_g45654_i0reverse_frame_2 - 0.025 14.7 1.0 0.031 14.4 1.0 1.1 1 0 0 1 1 1 0 GWT1 Herpes_BLLF1 PF05109.13 NODE_53578_length_329_cov_2.500000_g45651_i0reverse_frame_2 - 0.0088 14.1 0.1 0.0091 14.0 0.1 1.0 1 0 0 1 1 1 1 Herpes virus major outer envelope glycoprotein (BLLF1) RNA_pol_A_CTD PF03118.15 NODE_53574_length_329_cov_2.778912_g45647_i0reverse_frame_2 - 0.16 11.8 0.1 0.28 11.0 0.1 1.4 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain Epiglycanin_C PF14654.6 NODE_53574_length_329_cov_2.778912_g45647_i0forward_frame_3 - 0.15 12.2 0.1 0.34 11.0 0.1 1.5 1 1 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region PapC_N PF13954.6 NODE_53574_length_329_cov_2.778912_g45647_i0forward_frame_2 - 8.9e-26 90.6 0.0 1e-25 90.5 0.0 1.0 1 0 0 1 1 1 1 PapC N-terminal domain NTP_transf_3 PF12804.7 NODE_53573_length_329_cov_2.996599_g45646_i0reverse_frame_2 - 6.1e-15 55.9 0.2 7.5e-15 55.6 0.2 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 NODE_53573_length_329_cov_2.996599_g45646_i0reverse_frame_2 - 0.0057 16.4 0.1 0.007 16.1 0.1 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF1040 PF06288.13 NODE_53573_length_329_cov_2.996599_g45646_i0forward_frame_2 - 0.00011 22.5 0.2 0.00019 21.7 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) DUF4131 PF13567.6 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_2 - 0.0057 16.3 2.2 0.0057 16.3 2.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) Wzy_C PF04932.15 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_2 - 0.021 14.5 0.2 0.024 14.3 0.2 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF4834 PF16118.5 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_2 - 0.23 12.4 4.4 0.49 11.4 4.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) DUF2393 PF09624.10 NODE_53568_length_329_cov_4.503401_g45641_i0reverse_frame_2 - 1 9.4 11.2 1.5 8.9 10.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2393) CBP_BcsG PF11658.8 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 0.16 10.3 5.1 0.19 10.1 5.1 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG CobD_Cbib PF03186.13 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 0.38 9.9 5.9 0.42 9.8 5.9 1.3 1 0 0 1 1 1 0 CobD/Cbib protein YfhO PF09586.10 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 0.42 8.8 4.0 0.48 8.6 4.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF4834 PF16118.5 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 1.7 9.7 18.8 1.2e+02 3.8 18.8 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) LMF1 PF06762.14 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_3 - 6.4 5.8 10.0 6.8 5.7 10.0 1.0 1 0 0 1 1 1 0 Lipase maturation factor TEX29 PF15839.5 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_2 - 0.13 12.8 3.0 0.2 12.3 3.0 1.2 1 0 0 1 1 1 0 Testis-expressed sequence 29 protein Transformer PF06495.11 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_2 - 0.14 12.2 16.4 0.16 12.0 16.4 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein SR-25 PF10500.9 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_2 - 0.84 9.2 15.1 0.99 9.0 15.1 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RSB_motif PF16294.5 NODE_53568_length_329_cov_4.503401_g45641_i0forward_frame_2 - 1.7 9.0 7.6 2.6 8.4 7.6 1.2 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif WAPL PF07814.13 NODE_53565_length_329_cov_36.629252_g45638_i0reverse_frame_3 - 0.051 12.4 0.5 0.058 12.2 0.5 1.1 1 0 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin C1ORF64 PF15547.6 NODE_53565_length_329_cov_36.629252_g45638_i0reverse_frame_2 - 0.12 12.8 0.5 0.62 10.5 0.2 1.9 1 1 1 2 2 2 0 Steroid receptor-associated and regulated protein SAE2 PF08573.10 NODE_53565_length_329_cov_36.629252_g45638_i0forward_frame_2 - 0.99 10.6 6.3 1.2 10.3 6.3 1.1 1 0 0 1 1 1 0 DNA repair protein endonuclease SAE2/CtIP C-terminus Parathyroid PF01279.17 NODE_53561_length_329_cov_51.629252_g45634_i0reverse_frame_2 - 0.12 13.0 0.1 0.14 12.8 0.1 1.1 1 0 0 1 1 1 0 Parathyroid hormone family Borrelia_REV PF03978.13 NODE_53560_length_329_cov_52.795918_g45633_i0reverse_frame_3 - 2.9 7.8 4.9 2.5 8.0 1.0 2.0 2 0 0 2 2 2 0 Borrelia burgdorferi REV protein FDX-ACB PF03147.14 NODE_53556_length_329_cov_61.166667_g45629_i0forward_frame_2 - 0.00079 19.8 0.0 0.00099 19.5 0.0 1.1 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain Adeno_E3_15_3 PF03307.14 NODE_53555_length_329_cov_62.982993_g45628_i0reverse_frame_3 - 0.0039 17.1 0.3 0.005 16.8 0.3 1.2 1 0 0 1 1 1 1 Adenovirus 15.3kD protein in E3 region BofA PF07441.11 NODE_53555_length_329_cov_62.982993_g45628_i0forward_frame_3 - 0.23 11.7 6.3 0.78 10.0 4.6 2.0 2 0 0 2 2 2 0 SigmaK-factor processing regulatory protein BofA TMEM52 PF14979.6 NODE_53553_length_329_cov_65.000000_g45626_i0forward_frame_3 - 0.18 11.7 0.4 0.24 11.3 0.4 1.2 1 0 0 1 1 1 0 Transmembrane 52 ADH_N_assoc PF13823.6 NODE_53553_length_329_cov_65.000000_g45626_i0forward_frame_3 - 0.32 11.0 0.5 0.47 10.4 0.5 1.2 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-associated Pox_E10 PF04805.12 NODE_53550_length_329_cov_74.459184_g45623_i0forward_frame_3 - 0.42 10.5 3.0 0.89 9.5 3.0 1.5 1 0 0 1 1 1 0 E10-like protein conserved region Ndc1_Nup PF09531.10 NODE_53550_length_329_cov_74.459184_g45623_i0forward_frame_3 - 3.2 6.3 7.2 4.3 5.9 7.2 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Fer4_23 PF18009.1 NODE_53546_length_329_cov_85.561224_g45619_i0reverse_frame_2 - 0.2 12.1 3.4 0.17 12.4 0.9 1.9 1 1 1 2 2 2 0 4Fe-4S iron-sulfur cluster binding domain HTH_16 PF12645.7 NODE_53543_length_329_cov_94.500000_g45616_i0reverse_frame_2 - 0.034 14.2 0.0 0.056 13.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Dickkopf_N PF04706.12 NODE_53542_length_329_cov_101.517007_g45615_i0reverse_frame_2 - 0.68 10.5 14.2 0.41 11.2 1.7 2.3 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region FdhE PF04216.12 NODE_53541_length_329_cov_101.554422_g45614_i0forward_frame_2 - 0.0091 15.9 0.3 0.0098 15.8 0.3 1.1 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation PSI PF01437.25 NODE_53539_length_329_cov_109.200680_g45612_i0reverse_frame_3 - 0.51 10.9 10.0 0.87 10.2 9.9 1.7 1 1 0 1 1 1 0 Plexin repeat Defensin_beta PF00711.19 NODE_53534_length_329_cov_144.006803_g45607_i0forward_frame_3 - 0.52 10.4 4.0 0.4 10.7 0.5 2.1 2 0 0 2 2 2 0 Beta defensin Troponin-I_N PF11636.8 NODE_53522_length_329_cov_495.612245_g45595_i0reverse_frame_2 - 0.19 11.7 4.7 0.49 10.4 4.7 1.8 1 0 0 1 1 1 0 Troponin I residues 1-32 DUF2897 PF11446.8 NODE_53517_length_330_cov_1.342373_g45590_i0forward_frame_2 - 0.22 11.5 1.4 0.35 10.8 0.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) PqiA PF04403.13 NODE_53516_length_330_cov_1.386441_g45589_i0reverse_frame_3 - 0.024 14.5 0.7 0.031 14.1 0.7 1.3 1 1 0 1 1 1 0 Paraquat-inducible protein A TPR_2 PF07719.17 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.0004 20.3 0.8 0.31 11.3 0.0 2.5 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.0015 18.2 0.6 0.0028 17.3 0.6 1.4 1 0 0 1 1 1 1 TPR repeat TPR_17 PF13431.6 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.0018 18.6 1.1 0.13 12.7 0.2 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.0024 17.9 2.0 0.69 10.3 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_53516_length_330_cov_1.386441_g45589_i0forward_frame_3 - 0.0025 17.6 2.6 0.56 10.1 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat Wzy_C PF04932.15 NODE_53515_length_330_cov_1.450847_g45588_i0reverse_frame_3 - 1 9.0 3.6 0.94 9.1 3.6 1.2 1 0 0 1 1 1 0 O-Antigen ligase DUF1280 PF06918.14 NODE_53514_length_330_cov_1.450847_g45587_i0forward_frame_2 - 0.088 12.4 0.5 0.25 10.9 0.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1280) TetR_C_3 PF08362.11 NODE_53505_length_330_cov_1.789831_g45578_i0forward_frame_2 - 0.12 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 YcdC-like protein, C-terminal region DUF3453 PF11935.8 NODE_53503_length_330_cov_1.932203_g45576_i0forward_frame_3 - 0.0054 16.4 0.2 0.0061 16.2 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3453) Resolvase PF00239.21 NODE_53488_length_330_cov_2.772881_g45561_i0forward_frame_3 - 1.3e-11 44.8 0.0 1.5e-11 44.6 0.0 1.0 1 0 0 1 1 1 1 Resolvase, N terminal domain PapD_C PF02753.17 NODE_53487_length_330_cov_3.081356_g45560_i0forward_frame_3 - 4.3e-08 33.4 0.0 5.9e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain TDP43_N PF18694.1 NODE_53486_length_330_cov_3.118644_g45559_i0reverse_frame_3 - 0.02 14.7 0.1 0.029 14.2 0.1 1.3 1 0 0 1 1 1 0 Transactive response DNA-binding protein N-terminal domain Ribosomal_L36e PF01158.18 NODE_53486_length_330_cov_3.118644_g45559_i0reverse_frame_3 - 0.078 13.2 0.5 0.11 12.7 0.5 1.2 1 0 0 1 1 1 0 Ribosomal protein L36e Colicin PF01024.19 NODE_53484_length_330_cov_3.403390_g45557_i0reverse_frame_2 - 0.049 13.5 2.2 0.051 13.5 2.2 1.1 1 0 0 1 1 1 0 Colicin pore forming domain Lamprin PF06403.11 NODE_53478_length_330_cov_7.172881_g45551_i0forward_frame_3 - 0.017 15.1 2.0 0.017 15.1 2.0 2.0 2 0 0 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_53478_length_330_cov_7.172881_g45551_i0forward_frame_2 - 0.4 10.7 9.5 0.1 12.5 6.7 1.4 2 0 0 2 2 2 0 Lamprin DUF3099 PF11298.8 NODE_53474_length_330_cov_16.094915_g45547_i0reverse_frame_2 - 0.017 15.3 0.6 0.026 14.6 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) TerB_C PF15615.6 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.007 16.7 4.2 0.0084 16.4 4.2 1.0 1 0 0 1 1 1 1 TerB-C domain 60KD_IMP PF02096.20 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.034 14.1 0.6 0.048 13.6 0.6 1.2 1 0 0 1 1 1 0 60Kd inner membrane protein MCU PF04678.13 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.052 13.6 1.9 0.083 13.0 1.9 1.3 1 0 0 1 1 1 0 Mitochondrial calcium uniporter OmpH PF03938.14 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.062 13.6 2.1 0.064 13.6 2.1 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.1 12.0 1.3 0.098 12.0 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YabA PF06156.13 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.46 11.1 4.3 0.61 10.8 4.0 1.5 1 1 0 1 1 1 0 Initiation control protein YabA Phage_Mu_Gam PF07352.12 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 0.61 10.0 5.0 0.83 9.6 4.7 1.3 1 1 0 1 1 1 0 Bacteriophage Mu Gam like protein RPA_interact_C PF14768.6 NODE_53474_length_330_cov_16.094915_g45547_i0forward_frame_3 - 1.5 9.5 4.3 3.4 8.3 1.4 2.2 1 1 1 2 2 2 0 Replication protein A interacting C-terminal DUF1658 PF07871.11 NODE_53473_length_330_cov_23.064407_g45546_i0reverse_frame_2 - 6 7.0 7.2 46 4.2 2.3 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1658) DUF5330 PF17264.2 NODE_53473_length_330_cov_23.064407_g45546_i0forward_frame_3 - 0.06 13.4 0.6 0.087 12.8 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5330) Abhydrolase_9_N PF15420.6 NODE_53471_length_330_cov_41.138983_g45544_i0reverse_frame_2 - 0.004 17.2 2.7 0.0048 16.9 2.7 1.1 1 0 0 1 1 1 1 Alpha/beta-hydrolase family N-terminus Baculo_F PF12259.8 NODE_53471_length_330_cov_41.138983_g45544_i0reverse_frame_2 - 0.1 11.1 1.1 0.12 10.9 1.1 1.1 1 0 0 1 1 1 0 Baculovirus F protein LRR19-TM PF15176.6 NODE_53471_length_330_cov_41.138983_g45544_i0reverse_frame_2 - 0.12 12.4 0.8 0.15 12.1 0.8 1.2 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain DUF1364 PF07102.12 NODE_53469_length_330_cov_52.905085_g45542_i0reverse_frame_2 - 0.04 13.8 2.5 0.056 13.3 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) GNVR PF13807.6 NODE_53469_length_330_cov_52.905085_g45542_i0forward_frame_3 - 0.19 11.6 0.0 0.26 11.2 0.0 1.2 1 0 0 1 1 1 0 G-rich domain on putative tyrosine kinase Defensin_like PF10868.8 NODE_53469_length_330_cov_52.905085_g45542_i0forward_frame_3 - 0.42 11.4 5.0 2.1 9.2 0.5 2.3 2 0 0 2 2 2 0 Cysteine-rich antifungal protein 2, defensin-like PocR PF10114.9 NODE_53468_length_330_cov_58.203390_g45541_i0reverse_frame_3 - 0.063 13.1 2.6 0.094 12.5 2.6 1.3 1 0 0 1 1 1 0 Sensory domain found in PocR Glyco_hydro_cc PF11790.8 NODE_53468_length_330_cov_58.203390_g45541_i0reverse_frame_2 - 0.1 12.1 0.5 1.2 8.6 0.2 1.9 1 1 1 2 2 2 0 Glycosyl hydrolase catalytic core ESF1 PF18209.1 NODE_53467_length_330_cov_58.986441_g40798_i1forward_frame_3 - 0.12 12.3 3.2 0.26 11.2 3.2 1.6 1 0 0 1 1 1 0 Embryo surrounding factor 1 Sperm_Ag_HE2 PF05324.13 NODE_53465_length_330_cov_63.122034_g45539_i0reverse_frame_2 - 0.054 14.0 0.1 0.16 12.5 0.1 1.7 2 0 0 2 2 2 0 Sperm antigen HE2 Cupin_3 PF05899.12 NODE_53465_length_330_cov_63.122034_g45539_i0forward_frame_2 - 1.9e-06 27.4 0.0 3.2e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 NODE_53465_length_330_cov_63.122034_g45539_i0forward_frame_2 - 0.0093 15.7 0.0 0.013 15.2 0.0 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_6 PF12852.7 NODE_53465_length_330_cov_63.122034_g45539_i0forward_frame_2 - 0.16 11.7 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Cupin Neprosin_AP PF14365.6 NODE_53461_length_330_cov_66.932203_g45535_i0reverse_frame_3 - 0.0031 18.0 1.1 0.0058 17.1 1.1 1.6 1 1 0 1 1 1 1 Neprosin activation peptide mRNA_cap_C PF03919.15 NODE_53458_length_330_cov_69.959322_g45532_i0reverse_frame_3 - 0.0036 17.9 0.1 0.0045 17.6 0.1 1.1 1 0 0 1 1 1 1 mRNA capping enzyme, C-terminal domain TerB_N PF13208.6 NODE_53457_length_330_cov_70.359322_g45531_i0reverse_frame_3 - 0.084 12.6 0.0 0.099 12.3 0.0 1.1 1 0 0 1 1 1 0 TerB N-terminal domain CaATP_NAI PF12515.8 NODE_53457_length_330_cov_70.359322_g45531_i0reverse_frame_3 - 5 6.8 8.4 11 5.7 1.3 2.9 2 1 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain PNMA PF14893.6 NODE_53457_length_330_cov_70.359322_g45531_i0forward_frame_2 - 0.013 14.9 0.0 0.015 14.7 0.0 1.1 1 0 0 1 1 1 0 PNMA # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks243.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks243.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks243.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks243.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3331 PF11811.8 NODE_53454_length_330_cov_76.230508_g45528_i0reverse_frame_2 - 0.006 16.4 0.5 0.0071 16.2 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3331) LAGLIDADG_1 PF00961.19 NODE_53452_length_330_cov_76.786441_g45526_i0forward_frame_2 - 0.053 14.5 1.2 0.065 14.2 1.2 1.2 1 0 0 1 1 1 0 LAGLIDADG endonuclease zf-C3HC4_3 PF13920.6 NODE_53451_length_330_cov_83.918644_g45525_i0forward_frame_3 - 3.3 7.6 9.4 1.2 9.1 6.7 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-CXXC PF02008.20 NODE_53451_length_330_cov_83.918644_g45525_i0forward_frame_3 - 4 7.6 10.6 0.76 9.8 3.0 2.8 2 1 0 2 2 2 0 CXXC zinc finger domain Peptidase_M19 PF01244.21 NODE_53450_length_330_cov_85.528814_g45524_i0reverse_frame_2 - 0.084 12.0 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Membrane dipeptidase (Peptidase family M19) UL40 PF10682.9 NODE_53448_length_330_cov_90.200000_g45522_i0reverse_frame_3 - 0.14 11.9 0.4 0.17 11.6 0.4 1.1 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 SHR3_chaperone PF08229.11 NODE_53446_length_330_cov_93.061017_g45520_i0forward_frame_2 - 0.44 9.5 4.5 0.52 9.3 4.5 1.2 1 0 0 1 1 1 0 ER membrane protein SH3 DUF5634 PF18681.1 NODE_53444_length_330_cov_99.494915_g45518_i0reverse_frame_3 - 0.033 14.5 0.5 0.07 13.5 0.1 1.6 1 1 1 2 2 2 0 Family of unknown function (DUF5634) Thioredoxin_8 PF13905.6 NODE_53444_length_330_cov_99.494915_g45518_i0reverse_frame_3 - 0.12 12.8 0.1 0.17 12.3 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like Hydrophobin_2 PF06766.11 NODE_53430_length_330_cov_344.301695_g45504_i0reverse_frame_2 - 0.031 14.2 4.6 0.045 13.7 4.6 1.3 1 0 0 1 1 1 0 Fungal hydrophobin Tom22 PF04281.13 NODE_53429_length_330_cov_372.552542_g45503_i0reverse_frame_2 - 0.0059 16.4 0.0 0.0088 15.8 0.0 1.3 1 1 0 1 1 1 1 Mitochondrial import receptor subunit Tom22 DUF3291 PF11695.8 ORF99396 - 0.13 11.9 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3291) SUZ-C PF12901.7 ORF96759 - 0.036 14.1 0.5 0.076 13.0 0.5 1.6 1 0 0 1 1 1 0 SUZ-C motif DUF446 PF04287.12 ORF9508 - 7.3e-34 115.7 2.6 8.2e-34 115.6 2.6 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase C Erythro-docking PF09277.11 ORF9508 - 0.46 10.4 0.1 0.46 10.4 0.1 2.0 2 0 0 2 2 2 0 Erythronolide synthase, docking TetR_C_23 PF17931.1 ORF9493 - 0.11 12.6 2.6 0.16 12.1 2.6 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CSRNP_N PF16019.5 ORF9493 - 0.72 9.7 7.0 0.81 9.6 7.0 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus ALMT PF11744.8 ORF9493 - 2.8 6.7 7.3 3 6.6 7.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Presenilin PF01080.17 ORF9493 - 8.5 5.0 6.1 9.8 4.8 6.1 1.0 1 0 0 1 1 1 0 Presenilin Rft-1 PF04506.13 ORF94368 - 0.022 13.5 1.3 0.024 13.4 1.3 1.1 1 0 0 1 1 1 0 Rft protein FYTT PF07078.11 ORF93928 - 0.066 12.5 0.1 0.08 12.3 0.1 1.1 1 0 0 1 1 1 0 Forty-two-three protein Spore_YunB PF09560.10 ORF91969 - 0.01 15.9 0.1 0.29 11.2 0.2 2.0 1 1 1 2 2 2 0 Sporulation protein YunB (Spo_YunB) DARPP-32 PF05395.12 ORF90574 - 0.00082 19.6 3.9 0.00092 19.5 3.9 1.0 1 0 0 1 1 1 1 Protein phosphatase inhibitor 1/DARPP-32 Deltaretro_Tax PF05599.11 ORF9055 - 0.33 11.5 2.6 0.45 11.1 1.9 1.6 1 1 1 2 2 2 0 Deltaretrovirus Tax protein Dynein_light PF01221.18 ORF89689 - 1.1e-20 73.7 0.6 1.5e-20 73.3 0.6 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 zf-RING_11 PF17123.5 ORF88953 - 3.1e-08 33.2 1.4 5.7e-08 32.4 1.4 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF88953 - 9.6e-08 32.2 0.7 1.5e-07 31.6 0.7 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF88953 - 8.1e-06 25.6 0.8 1.3e-05 24.9 0.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF88953 - 0.001 19.0 1.1 0.0017 18.3 1.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF88953 - 0.001 19.0 1.1 0.0021 18.1 1.1 1.5 1 0 0 1 1 1 1 RING-type zinc-finger Baculo_RING PF05883.11 ORF88953 - 0.0034 17.4 0.1 0.0046 16.9 0.1 1.3 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4 PF00097.25 ORF88953 - 0.0046 16.8 0.9 0.0089 15.9 0.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) DUF2304 PF10066.9 ORF88953 - 0.051 13.8 0.3 0.076 13.2 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) zf-C3HC4_3 PF13920.6 ORF88953 - 0.057 13.3 0.8 0.11 12.4 0.8 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Herpes_capsid PF06112.11 ORF88914 - 0.0092 16.1 2.1 0.012 15.7 2.1 1.1 1 0 0 1 1 1 1 Gammaherpesvirus capsid protein DUF2856 PF11043.8 ORF88651 - 0.0002 21.4 1.4 0.00025 21.1 1.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2856) DUF4435 PF14491.6 ORF88651 - 0.66 9.8 5.9 0.76 9.6 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) Phage_integrase PF00589.22 ORF88304 - 0.032 14.0 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 Phage integrase family DUF3783 PF12646.7 ORF87341 - 0.15 12.1 0.5 0.27 11.2 0.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3783) EF-hand_1 PF00036.32 ORF86488 - 1.3e-19 68.2 4.3 3.5e-10 38.7 2.2 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF86488 - 2.2e-17 63.3 1.3 3.2e-17 62.7 1.3 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF86488 - 3e-17 62.2 2.1 8.4e-11 41.6 0.5 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF86488 - 4.6e-15 54.4 4.6 6e-07 28.7 0.9 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF86488 - 5.4e-15 54.0 1.0 6.1e-07 28.9 0.1 2.5 2 0 0 2 2 2 2 EF-hand domain p25-alpha PF05517.12 ORF86488 - 3.2e-05 24.2 0.1 3.9e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 p25-alpha EF-hand_4 PF12763.7 ORF86488 - 0.00018 21.4 1.0 0.00037 20.4 0.4 1.6 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF86488 - 0.003 17.9 0.2 0.008 16.5 0.2 1.6 1 1 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF86488 - 0.031 14.6 0.2 0.13 12.6 0.2 1.8 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF86488 - 0.054 13.7 0.7 0.14 12.4 0.7 1.8 1 1 0 1 1 1 0 Dockerin type I domain Caleosin PF05042.13 ORF86488 - 0.12 12.4 0.2 1.6 8.7 0.0 1.9 1 1 1 2 2 2 0 Caleosin related protein GAPES1 PF17155.4 ORF86488 - 0.13 11.5 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain Pkinase PF00069.25 ORF85429 - 2.6e-05 23.7 0.0 2.8e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain RICTOR_M PF14666.6 ORF8483 - 0.018 14.8 0.3 0.025 14.3 0.2 1.4 1 1 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain Orai-1 PF07856.12 ORF84552 - 1.9 8.1 8.6 0.85 9.3 6.0 1.5 1 1 0 1 1 1 0 Mediator of CRAC channel activity T2SSE PF00437.20 ORF83367 - 0.046 12.8 0.0 0.048 12.7 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein T4_neck-protein PF11649.8 ORF83130 - 0.28 10.5 0.0 0.33 10.3 0.0 1.1 1 0 0 1 1 1 0 Virus neck protein FeThRed_B PF02943.15 ORF8214 - 0.033 14.2 1.7 0.047 13.7 1.7 1.2 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain DUF2452 PF10504.9 ORF80727 - 0.06 12.8 0.8 0.12 11.8 0.6 1.6 1 1 0 2 2 2 0 Protein of unknown function (DUF2452) MyTH4 PF00784.17 ORF80467 - 0.95 10.0 9.7 1.4 9.4 0.4 2.5 2 1 1 3 3 3 0 MyTH4 domain TraL PF07178.11 ORF80211 - 0.035 14.6 0.1 0.044 14.2 0.1 1.2 1 0 0 1 1 1 0 TraL protein TRCF PF03461.15 ORF79816 - 0.033 14.6 0.0 0.043 14.2 0.0 1.1 1 0 0 1 1 1 0 TRCF domain TetR_C_23 PF17931.1 ORF79644 - 0.11 12.6 2.6 0.16 12.1 2.6 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CSRNP_N PF16019.5 ORF79644 - 0.72 9.7 7.0 0.81 9.6 7.0 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus ALMT PF11744.8 ORF79644 - 2.8 6.7 7.3 3 6.6 7.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Presenilin PF01080.17 ORF79644 - 8.5 5.0 6.1 9.8 4.8 6.1 1.0 1 0 0 1 1 1 0 Presenilin DUF4234 PF14018.6 ORF7863 - 2.3 8.4 7.3 9.6 6.4 7.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4234) Nrap_D6 PF17407.2 ORF765 - 4.5e-07 30.1 0.0 5.9e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Nrap protein domain 6 LSDAT_prok PF18171.1 ORF7615 - 0.092 12.0 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 SLOG in TRPM, prokaryote Arteri_Gl PF00951.18 ORF76056 - 0.4 10.5 5.7 0.47 10.2 5.7 1.2 1 1 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF4656 PF15551.6 ORF76056 - 10 5.6 9.5 10 5.5 9.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) Gal_mutarotas_3 PF18080.1 ORF75874 - 0.19 11.7 4.6 0.2 11.6 4.6 1.0 1 0 0 1 1 1 0 Galactose mutarotase-like fold domain Atg14 PF10186.9 ORF75874 - 1.2 8.2 11.7 1.3 8.0 11.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 RabGAP-TBC PF00566.18 ORF72909 - 2e-08 34.2 0.6 2.9e-08 33.6 0.6 1.3 1 0 0 1 1 1 1 Rab-GTPase-TBC domain TTD PF12148.8 ORF72546 - 0.013 15.3 0.6 0.016 15.0 0.6 1.1 1 0 0 1 1 1 0 Tandem tudor domain within UHRF1 LodA_N PF17990.1 ORF72546 - 0.028 14.3 0.1 0.038 13.9 0.1 1.2 1 0 0 1 1 1 0 L-Lysine epsilon oxidase N-terminal FAM101 PF15068.6 ORF72372 - 0.081 12.9 0.3 0.083 12.8 0.3 1.2 1 0 0 1 1 1 0 FAM101 family TIL PF01826.17 ORF71249 - 0.028 14.7 5.0 0.04 14.2 5.0 1.2 1 0 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain cNMP_binding PF00027.29 ORF70900 - 0.001 19.1 0.0 0.0036 17.3 0.0 1.8 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain RelA_SpoT PF04607.17 ORF70900 - 0.005 17.1 0.3 0.0065 16.7 0.3 1.3 1 0 0 1 1 1 1 Region found in RelA / SpoT proteins Glyco_transf_88 PF16849.5 ORF70900 - 0.014 14.3 0.1 0.015 14.3 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 88 DUF5406 PF17400.2 ORF70900 - 0.063 13.7 0.3 0.07 13.6 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5406) TMEM213 PF15192.6 ORF70070 - 0.082 12.9 1.2 0.13 12.2 1.2 1.4 1 0 0 1 1 1 0 TMEM213 family Arf PF00025.21 ORF69761 - 1.5e-38 132.0 0.1 1.6e-38 131.9 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF69761 - 5.7e-15 55.6 0.1 7.4e-15 55.2 0.1 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF69761 - 2.6e-12 46.5 0.0 3.1e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF69761 - 6.2e-11 42.2 0.1 7.5e-11 41.9 0.1 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 ORF69761 - 8e-09 35.2 0.1 9e-09 35.0 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region G-alpha PF00503.20 ORF69761 - 2.3e-08 33.6 0.1 0.00011 21.5 0.0 2.0 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 ORF69761 - 1.1e-06 28.7 0.1 1.5e-06 28.3 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF69761 - 0.0056 16.2 0.3 0.0074 15.8 0.3 1.3 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_24 PF13479.6 ORF69761 - 0.015 15.1 0.0 0.017 14.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF69761 - 0.016 15.8 0.2 0.028 14.9 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF69761 - 0.049 13.7 0.0 0.053 13.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF69761 - 0.1 12.2 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 ORF69761 - 0.11 12.7 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain Pro_CA PF00484.19 ORF69761 - 0.14 12.4 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Carbonic anhydrase G6PD_C PF02781.16 ORF69748 - 0.12 11.6 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, C-terminal domain Shugoshin_C PF07557.11 ORF69035 - 0.069 13.0 1.2 0.15 11.9 1.2 1.6 1 1 0 1 1 1 0 Shugoshin C terminus LMBR1 PF04791.16 ORF68519 - 1.8 7.4 6.0 1.9 7.3 6.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Ycf54 PF10674.9 ORF68519 - 5 7.5 6.8 0.87 9.9 0.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2488) DUF4896 PF16237.5 ORF67356 - 0.074 12.9 2.3 0.18 11.7 2.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4896) DUF1184 PF06683.11 ORF67089 - 0.039 13.5 1.8 0.044 13.3 1.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1184) Bro-N PF02498.17 ORF67089 - 0.2 12.4 4.6 0.37 11.5 4.1 1.7 1 1 1 2 2 2 0 BRO family, N-terminal domain Lipoprotein_2 PF00921.17 ORF67089 - 0.21 11.1 8.3 0.24 10.9 8.3 1.1 1 0 0 1 1 1 0 Borrelia lipoprotein LsmAD PF06741.13 ORF67089 - 0.27 11.8 5.5 0.082 13.5 2.3 1.8 2 0 0 2 2 2 0 LsmAD domain Albumin_I PF08027.11 ORF65894 - 0.023 14.3 0.2 5.3 6.7 0.0 2.5 2 0 0 2 2 2 0 Albumin I chain b NeuB PF03102.14 ORF6550 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 NeuB family PAC3 PF10178.9 ORF65108 - 0.034 14.3 0.0 0.91 9.7 0.0 2.1 2 0 0 2 2 2 0 Proteasome assembly chaperone 3 MM_CoA_mutase PF01642.22 ORF6484 - 0.5 8.8 3.1 0.62 8.5 3.1 1.0 1 0 0 1 1 1 0 Methylmalonyl-CoA mutase FUSC-like PF12805.7 ORF63427 - 0.05 12.7 0.1 0.059 12.4 0.1 1.2 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS CARM1 PF11531.8 ORF63222 - 0.79 9.9 5.1 1.8 8.8 5.1 1.7 1 1 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal Ac110_PIF PF07280.11 ORF63222 - 0.83 9.5 4.7 1.5 8.7 4.7 1.4 1 0 0 1 1 1 0 Per os infectivity factor AC110 Yippee-Mis18 PF03226.14 ORF61596 - 4.6e-14 52.5 2.5 6e-14 52.1 2.5 1.1 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly RIG-I_C-RD PF11648.8 ORF61596 - 0.009 16.2 1.2 0.012 15.8 1.2 1.3 1 0 0 1 1 1 1 C-terminal domain of RIG-I DUF5463 PF17551.2 ORF5967 - 0.023 14.6 0.9 0.31 11.0 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5463) Collagen PF01391.18 ORF5967 - 0.08 12.7 2.3 0.11 12.3 2.3 1.2 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) AKAP95 PF04988.12 ORF58687 - 0.067 13.4 0.6 0.095 12.9 0.6 1.3 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) zf-RanBP PF00641.18 ORF58687 - 3.2 7.2 9.3 0.17 11.2 2.1 2.5 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others DUF3490 PF11995.8 ORF55453 - 0.02 14.7 0.0 0.043 13.6 0.0 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF3490) IF2_assoc PF08364.11 ORF55060 - 0.12 12.7 2.0 0.16 12.3 1.9 1.5 1 1 0 1 1 1 0 Bacterial translation initiation factor IF-2 associated region Syntaxin PF00804.25 ORF5478 - 0.22 11.2 6.1 0.25 11.0 6.1 1.1 1 0 0 1 1 1 0 Syntaxin CENP-H PF05837.12 ORF5478 - 0.24 11.8 5.6 0.3 11.5 5.6 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) TMPIT PF07851.13 ORF5478 - 0.94 8.7 4.5 1.1 8.5 4.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein Roc PF08477.13 ORF53545 - 0.00024 21.3 0.0 0.00037 20.7 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF53545 - 0.0021 17.7 0.0 0.0029 17.2 0.0 1.3 1 0 0 1 1 1 1 Ras family AAA_16 PF13191.6 ORF53545 - 0.019 15.4 0.0 0.025 15.0 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 ORF53545 - 0.02 15.2 0.0 0.031 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF53545 - 0.026 14.2 0.1 0.037 13.8 0.1 1.2 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 ORF53545 - 0.03 13.7 0.0 0.038 13.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein MMR_HSR1 PF01926.23 ORF53545 - 0.032 14.3 0.0 0.059 13.5 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF53545 - 0.045 13.3 0.0 0.07 12.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF53545 - 0.14 12.1 0.1 0.2 11.5 0.0 1.3 1 1 0 1 1 1 0 RsgA GTPase AAA PF00004.29 ORF53545 - 0.15 12.5 0.1 0.21 12.0 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 ORF53545 - 0.17 11.2 0.0 0.26 10.6 0.0 1.4 1 1 0 1 1 1 0 Zeta toxin DAP3 PF10236.9 ORF53545 - 0.17 11.0 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 NACHT PF05729.12 ORF53545 - 0.2 11.6 0.0 0.74 9.7 0.0 1.7 2 0 0 2 2 2 0 NACHT domain Roc PF08477.13 ORF53147 - 0.00024 21.3 0.0 0.00037 20.7 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF53147 - 0.0021 17.7 0.0 0.0029 17.2 0.0 1.3 1 0 0 1 1 1 1 Ras family AAA_16 PF13191.6 ORF53147 - 0.019 15.4 0.0 0.025 15.0 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 ORF53147 - 0.02 15.2 0.0 0.031 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF53147 - 0.026 14.2 0.1 0.037 13.8 0.1 1.2 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 ORF53147 - 0.03 13.7 0.0 0.038 13.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein MMR_HSR1 PF01926.23 ORF53147 - 0.032 14.3 0.0 0.059 13.5 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF53147 - 0.045 13.3 0.0 0.07 12.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF53147 - 0.14 12.1 0.1 0.2 11.5 0.0 1.3 1 1 0 1 1 1 0 RsgA GTPase AAA PF00004.29 ORF53147 - 0.15 12.5 0.1 0.21 12.0 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 ORF53147 - 0.17 11.2 0.0 0.26 10.6 0.0 1.4 1 1 0 1 1 1 0 Zeta toxin DAP3 PF10236.9 ORF53147 - 0.17 11.0 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 NACHT PF05729.12 ORF53147 - 0.2 11.6 0.0 0.74 9.7 0.0 1.7 2 0 0 2 2 2 0 NACHT domain DUF1823 PF08853.11 ORF52038 - 0.083 13.1 0.3 0.098 12.9 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1823) PRRSV_Env PF02340.15 ORF52038 - 0.17 11.3 0.1 0.19 11.1 0.1 1.1 1 0 0 1 1 1 0 PRRSV putative envelope protein LMBR1 PF04791.16 ORF52038 - 4.5 6.1 6.0 5.3 5.8 6.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Nucleoporin_FG2 PF15967.5 ORF51270 - 1.9 6.9 5.4 2.2 6.7 5.4 1.0 1 0 0 1 1 1 0 Nucleoporin FG repeated region Hpre_diP_synt_I PF07456.11 ORF50941 - 0.096 12.7 2.9 0.14 12.1 2.9 1.3 1 1 0 1 1 1 0 Heptaprenyl diphosphate synthase component I Herpes_LMP1 PF05297.11 ORF49945 - 0.43 9.7 2.8 0.49 9.5 2.8 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) zf-RING_2 PF13639.6 ORF48649 - 2.6e-07 30.8 21.6 2.6e-07 30.8 21.6 2.3 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF48649 - 2.9e-05 23.8 17.8 2.9e-05 23.8 17.8 2.4 2 2 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF48649 - 0.00026 20.8 23.1 0.00026 20.8 23.1 2.6 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF48649 - 0.00028 20.7 18.7 0.00028 20.7 18.7 2.7 2 2 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF48649 - 0.00085 19.3 14.7 0.00085 19.3 14.7 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-B_box PF00643.24 ORF48649 - 0.0093 16.1 8.8 0.0093 16.1 8.8 3.9 2 1 1 3 3 3 1 B-box zinc finger U-box PF04564.15 ORF48649 - 0.054 13.7 0.5 0.087 13.0 0.5 1.5 1 1 0 1 1 1 0 U-box domain Dockerin_1 PF00404.18 ORF4853 - 0.00019 21.5 1.1 0.077 13.2 0.0 1.8 1 1 1 2 2 2 2 Dockerin type I domain EF-hand_5 PF13202.6 ORF4853 - 0.0055 16.1 0.1 0.0089 15.5 0.1 1.3 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF4853 - 0.0057 16.1 0.1 0.015 14.8 0.0 1.7 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF4853 - 0.0086 16.5 0.0 0.017 15.6 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF4853 - 0.03 14.2 0.0 0.061 13.2 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF4853 - 0.037 14.0 0.1 0.08 12.9 0.1 1.5 1 0 0 1 1 1 0 EF-hand domain DUF2018 PF09442.10 ORF4853 - 0.062 14.3 0.1 0.13 13.3 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF2018) zf-dskA_traR PF01258.17 ORF48231 - 0.1 12.5 1.1 9 6.3 0.1 2.9 2 1 1 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger MinC_C PF03775.16 ORF47966 - 4.6e-11 42.6 0.0 5.4e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Septum formation inhibitor MinC, C-terminal domain UxaC PF02614.14 ORF46727 - 6.4e-57 193.4 0.8 7.1e-57 193.3 0.8 1.0 1 0 0 1 1 1 1 Glucuronate isomerase BT1 PF03092.16 ORF46727 - 0.064 11.5 0.0 0.073 11.3 0.0 1.0 1 0 0 1 1 1 0 BT1 family NiFe-hyd_HybE PF11939.8 ORF46327 - 0.0062 16.5 0.1 0.0076 16.2 0.1 1.3 1 0 0 1 1 1 1 [NiFe]-hydrogenase assembly, chaperone, HybE Bac_DNA_binding PF00216.21 ORF45881 - 7e-12 45.4 2.1 8.9e-12 45.1 2.1 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein hnRNP_Q_AcD PF18360.1 ORF45881 - 0.068 13.1 0.0 0.12 12.3 0.0 1.5 1 1 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain Tetrabrachion PF11401.8 ORF4538 - 0.041 13.9 0.5 0.12 12.4 0.5 1.7 1 0 0 1 1 1 0 Tetrabrachion CxxCxxCC PF03692.15 ORF43506 - 1.4e-12 48.1 6.6 1.6e-12 47.9 6.6 1.1 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain SufE PF02657.15 ORF43050 - 4.3e-31 107.3 0.0 4.8e-31 107.2 0.0 1.0 1 0 0 1 1 1 1 Fe-S metabolism associated domain ORF_2_N PF18492.1 ORF43050 - 0.13 12.4 1.9 0.13 12.5 1.1 1.4 2 0 0 2 2 2 0 Open reading frame 2 N-terminal domain DUF1287 PF06940.11 ORF42975 - 2.5e-42 144.3 0.0 2.8e-42 144.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1287) CHAP PF05257.16 ORF42975 - 0.0059 17.2 0.0 0.008 16.7 0.0 1.3 1 0 0 1 1 1 1 CHAP domain Amidase_6 PF12671.7 ORF42975 - 0.0065 16.6 0.1 0.0067 16.6 0.1 1.1 1 0 0 1 1 1 1 Putative amidase domain Pox_I6 PF04595.13 ORF42883 - 0.023 13.7 0.1 0.03 13.3 0.1 1.1 1 0 0 1 1 1 0 Poxvirus I6-like family DUF717 PF05338.12 ORF41441 - 0.0035 17.4 2.1 0.0038 17.3 0.7 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF717) VWA_2 PF13519.6 ORF41441 - 0.049 14.3 0.0 0.063 13.9 0.0 1.2 1 0 0 1 1 1 0 von Willebrand factor type A domain EF-hand_1 PF00036.32 ORF41273 - 1.7e-13 49.0 2.1 1.8e-07 30.2 0.4 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF41273 - 2.2e-12 45.8 0.9 5e-07 29.1 0.4 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF41273 - 4.1e-11 41.8 2.9 4e-06 26.1 0.4 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF41273 - 1.9e-10 41.1 1.0 2.8e-10 40.5 1.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF41273 - 0.00021 21.1 1.2 0.0012 18.6 0.6 2.5 2 1 1 3 3 3 1 EF-hand domain pair MNE1 PF13762.6 ORF41273 - 0.0017 18.4 0.1 0.0019 18.2 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial splicing apparatus component DIX PF00778.17 ORF41273 - 0.11 12.3 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 DIX domain EF-hand_10 PF14788.6 ORF41273 - 0.2 11.5 1.7 0.32 10.9 0.1 2.1 2 1 1 3 3 3 0 EF hand zf-TAZ PF02135.16 ORF41216 - 0.22 12.0 2.9 0.17 12.3 1.7 1.5 1 1 0 1 1 1 0 TAZ zinc finger Deltaretro_Tax PF05599.11 ORF4121 - 0.33 11.5 2.6 0.45 11.1 1.9 1.6 1 1 1 2 2 2 0 Deltaretrovirus Tax protein HECA PF15353.6 ORF40501 - 0.015 15.5 0.1 0.021 15.1 0.1 1.2 1 0 0 1 1 1 0 Headcase protein family homologue 14-3-3 PF00244.20 ORF40270 - 0.017 14.7 0.0 0.023 14.2 0.0 1.1 1 0 0 1 1 1 0 14-3-3 protein SbmA_BacA PF05992.12 ORF40035 - 0.65 9.4 11.0 0.79 9.1 11.0 1.1 1 0 0 1 1 1 0 SbmA/BacA-like family Tetrabrachion PF11401.8 ORF35692 - 0.041 13.9 0.5 0.12 12.4 0.5 1.7 1 0 0 1 1 1 0 Tetrabrachion p450 PF00067.22 ORF34544 - 5.1e-18 65.1 0.0 5.3e-18 65.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Dopey_N PF04118.14 ORF3443 - 0.085 12.0 3.3 0.095 11.8 3.3 1.1 1 0 0 1 1 1 0 Dopey, N-terminal Ras PF00071.22 ORF34129 - 2.4e-37 128.0 0.2 2.7e-37 127.8 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF34129 - 1.4e-27 96.3 0.1 1.6e-27 96.1 0.1 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF34129 - 5.6e-11 42.2 0.0 6e-11 42.1 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF34129 - 9.7e-06 25.6 0.0 1.1e-05 25.4 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF34129 - 0.0036 16.7 0.0 0.0039 16.6 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF34129 - 0.0077 15.8 0.1 0.4 10.2 0.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Septin PF00735.18 ORF34129 - 0.046 13.0 0.0 0.053 12.8 0.0 1.1 1 0 0 1 1 1 0 Septin TniB PF05621.11 ORF34129 - 0.063 12.7 0.0 0.079 12.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RsgA_GTPase PF03193.16 ORF34129 - 0.12 12.3 0.0 0.21 11.5 0.0 1.6 1 1 1 2 2 2 0 RsgA GTPase DUF3298 PF11738.8 ORF34129 - 0.12 13.4 0.0 0.17 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3298) V-SNARE_C PF12352.8 ORF32926 - 0.0008 19.7 0.0 0.0012 19.1 0.0 1.2 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Ski2_N PF17911.1 ORF32926 - 0.0012 18.6 0.0 0.0015 18.4 0.0 1.1 1 0 0 1 1 1 1 Ski2 N-terminal region ANP PF00212.18 ORF31165 - 0.056 13.6 1.4 7.2 6.9 0.3 2.4 2 0 0 2 2 2 0 Atrial natriuretic peptide DUF2856 PF11043.8 ORF29287 - 0.0002 21.4 1.4 0.00025 21.1 1.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2856) DUF4435 PF14491.6 ORF29287 - 0.66 9.8 5.9 0.76 9.6 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) MbtH PF03621.13 ORF28902 - 0.0096 15.3 0.1 0.018 14.4 0.1 1.5 1 0 0 1 1 1 1 MbtH-like protein RecA_dep_nuc PF16786.5 ORF28709 - 0.059 13.5 0.5 0.077 13.1 0.5 1.2 1 0 0 1 1 1 0 Recombination enhancement, RecA-dependent nuclease MFS18 PF17352.2 ORF28035 - 0.56 10.6 4.1 0.76 10.2 4.1 1.2 1 0 0 1 1 1 0 Male Flower Specific protein 18 Fz PF01392.22 ORF27648 - 0.12 13.0 1.2 0.17 12.5 1.2 1.2 1 0 0 1 1 1 0 Fz domain TNFR_c6 PF00020.18 ORF24922 - 6.9 7.2 9.5 7.5 7.0 7.7 2.1 2 1 0 2 2 2 0 TNFR/NGFR cysteine-rich region NFACT-R_1 PF05670.13 ORF22699 - 0.075 13.7 0.4 0.1 13.2 0.4 1.2 1 0 0 1 1 1 0 NFACT protein RNA binding domain DUF3439 PF11921.8 ORF22442 - 0.24 11.4 0.6 0.32 11.0 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) GWT1 PF06423.12 ORF22201 - 2.5 8.2 9.5 3.8 7.6 9.5 1.5 1 1 0 1 1 1 0 GWT1 TetR_C_23 PF17931.1 ORF21775 - 0.11 12.6 2.6 0.16 12.1 2.6 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CSRNP_N PF16019.5 ORF21775 - 0.72 9.7 7.0 0.81 9.6 7.0 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus ALMT PF11744.8 ORF21775 - 2.8 6.7 7.3 3 6.6 7.3 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Presenilin PF01080.17 ORF21775 - 8.5 5.0 6.1 9.8 4.8 6.1 1.0 1 0 0 1 1 1 0 Presenilin TraL PF07178.11 ORF21481 - 0.035 14.6 0.1 0.044 14.2 0.1 1.2 1 0 0 1 1 1 0 TraL protein SPT_ssu-like PF11779.8 ORF21477 - 0.052 13.2 1.1 0.11 12.1 1.1 1.6 1 1 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like TIL PF01826.17 ORF21375 - 0.028 14.7 5.0 0.04 14.2 5.0 1.2 1 0 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain MPS-4 PF17523.2 ORF20569 - 4.3 7.5 8.4 0.61 10.2 2.5 2.3 2 1 1 3 3 3 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 TonB_dep_Rec PF00593.24 ORF17745 - 1.7e-14 54.5 7.4 1.9e-14 54.4 7.4 1.0 1 0 0 1 1 1 1 TonB dependent receptor OMP_b-brl PF13505.6 ORF17745 - 0.0068 16.5 0.6 0.0099 16.0 0.6 1.3 1 0 0 1 1 1 1 Outer membrane protein beta-barrel domain Methyltransf_28 PF02636.17 ORF1683 - 0.11 12.0 0.2 0.14 11.7 0.2 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase zf-LITAF-like PF10601.9 ORF16754 - 2.2e-09 37.5 20.5 3.2e-09 36.9 20.5 1.3 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF2654 PF10849.8 ORF16754 - 0.091 13.0 0.7 9.7 6.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2654) zf-CCCH_4 PF18044.1 ORF16051 - 1.7e-14 53.2 12.1 3.6e-07 29.8 2.5 2.4 2 0 0 2 2 2 2 CCCH-type zinc finger zf_CCCH_4 PF18345.1 ORF16051 - 3.7e-13 49.0 13.9 1.2e-06 28.3 2.3 2.4 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF16051 - 1.2e-12 47.4 10.5 4.2e-07 29.7 2.1 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF16051 - 2e-06 28.0 11.4 0.00042 20.7 1.7 2.6 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Torus PF16131.5 ORF16051 - 1e-05 26.2 7.1 0.011 16.5 0.4 2.1 1 1 1 2 2 2 2 Torus domain CRAM_rpt PF07016.11 ORF16051 - 0.1 12.4 0.5 3.7 7.5 0.0 2.4 2 0 0 2 2 2 0 Cysteine-rich acidic integral membrane protein precursor zf_CCCH_5 PF18384.1 ORF16051 - 0.14 12.3 3.4 1.2 9.3 0.5 2.5 2 1 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) zf-CCCH_3 PF15663.5 ORF16051 - 0.23 11.7 8.0 2.7 8.2 0.3 2.1 2 0 0 2 2 2 0 Zinc-finger containing family 4F5 PF04419.14 ORF16007 - 9.4e-07 29.6 8.6 9.4e-07 29.6 8.6 3.7 4 0 0 4 4 4 1 4F5 protein family PEGSRP PF07623.11 ORF152884 - 0.81 9.6 6.1 0.14 12.0 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) PAN_4 PF14295.6 ORF15271 - 0.066 13.1 0.8 0.12 12.3 0.8 1.4 1 0 0 1 1 1 0 PAN domain DUF3106 PF11304.8 ORF152574 - 0.097 13.1 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3106) VPS13_C PF16909.5 ORF14871 - 9.5e-06 25.5 0.9 1.2e-05 25.2 0.9 1.1 1 0 0 1 1 1 1 Vacuolar-sorting-associated 13 protein C-terminal Rap1a PF18602.1 ORF148543 - 5.3 7.4 9.4 18 5.7 9.4 1.9 1 1 0 1 1 1 0 Rap1a immunity proteins COX4_pro PF03626.14 ORF148272 - 5.3e-19 68.4 15.0 6.8e-19 68.1 15.0 1.1 1 0 0 1 1 1 1 Prokaryotic Cytochrome C oxidase subunit IV MtrF PF09472.10 ORF148272 - 0.19 11.2 0.1 0.19 11.2 0.1 2.5 3 0 0 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) ESSS PF10183.9 ORF148272 - 0.24 11.6 1.9 0.2 11.9 0.4 1.6 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) DUF1218 PF06749.12 ORF148272 - 0.25 11.9 13.0 0.98 10.0 4.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1218) DUF3810 PF12725.7 ORF148272 - 1.1 8.5 8.4 1.5 8.1 8.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) DUF3169 PF11368.8 ORF148272 - 2 7.9 13.8 1.2 8.5 5.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) Presenilin PF01080.17 ORF148272 - 2.3 6.9 12.8 2.3 6.9 12.8 1.0 1 0 0 1 1 1 0 Presenilin TFIIIC_delta PF12657.7 ORF147586 - 0.0026 17.7 0.1 0.0029 17.6 0.1 1.1 1 0 0 1 1 1 1 Transcription factor IIIC subunit delta N-term PknG_rubred PF16919.5 ORF147503 - 0.0058 16.8 0.3 0.0076 16.4 0.3 1.2 1 0 0 1 1 1 1 Protein kinase G rubredoxin domain POPLD PF08170.12 ORF146917 - 0.079 13.3 0.1 0.21 12.0 0.0 1.6 1 1 1 2 2 2 0 POPLD (NUC188) domain GvpD PF07088.11 ORF145882 - 0.073 11.7 0.1 0.086 11.4 0.1 1.1 1 0 0 1 1 1 0 GvpD gas vesicle protein Dpy-30 PF05186.13 ORF14565 - 2e-15 56.2 0.2 2.9e-15 55.7 0.2 1.3 1 0 0 1 1 1 1 Dpy-30 motif RIIa PF02197.17 ORF14565 - 3.7e-05 23.3 1.3 0.00044 19.9 0.2 2.7 2 1 1 3 3 3 1 Regulatory subunit of type II PKA R-subunit CDC50 PF03381.15 ORF144217 - 2.6e-16 60.0 0.7 3.2e-16 59.7 0.7 1.1 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Dynein_light PF01221.18 ORF143231 - 1.1e-20 73.7 0.6 1.5e-20 73.3 0.6 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 Ribosomal_S19e PF01090.19 ORF142609 - 4.2e-35 120.4 0.0 4.7e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e MyTH4 PF00784.17 ORF141979 - 3.7 8.1 7.4 14 6.3 0.2 2.9 3 0 0 3 3 3 0 MyTH4 domain Mito_fiss_reg PF05308.11 ORF141431 - 0.15 12.1 0.1 0.21 11.6 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator SPOB_ab PF14682.6 ORF139807 - 0.017 15.2 0.3 0.027 14.5 0.3 1.3 1 0 0 1 1 1 0 Sporulation initiation phospho-transferase B, C-terminal BCDHK_Adom3 PF10436.9 ORF139807 - 0.018 14.8 0.5 0.021 14.6 0.5 1.1 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase RBP_receptor PF14752.6 ORF139412 - 0.02 13.5 0.0 0.022 13.4 0.0 1.0 1 0 0 1 1 1 0 Retinol binding protein receptor DUF983 PF06170.12 ORF138980 - 0.62 10.5 5.8 0.9 10.0 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF983) Abdominal-A PF12407.8 ORF13856 - 0.024 14.2 0.9 0.033 13.7 0.9 1.2 1 0 0 1 1 1 0 Homeobox protein FAM178 PF14816.6 ORF13856 - 0.026 13.5 1.0 0.03 13.3 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function, FAM178 MOZART1 PF12554.8 ORF13856 - 0.27 11.0 0.2 0.27 11.0 0.2 2.3 2 1 0 2 2 2 0 Mitotic-spindle organizing gamma-tubulin ring associated DUF148 PF02520.17 ORF137619 - 0.027 14.6 0.5 0.037 14.1 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF148 NUDIX_4 PF14815.6 ORF134439 - 0.37 10.8 2.9 0.17 11.9 0.7 1.6 2 0 0 2 2 2 0 NUDIX domain Ribosomal_S19e PF01090.19 ORF134178 - 4.1e-35 120.4 0.0 4.7e-35 120.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Ly49 PF08391.10 ORF132888 - 0.00018 21.9 2.7 0.00021 21.7 2.7 1.1 1 0 0 1 1 1 1 Ly49-like protein, N-terminal region TusA PF01206.17 ORF131230 - 0.06 13.2 0.0 5.2 7.0 0.0 2.2 2 0 0 2 2 2 0 Sulfurtransferase TusA CPSase_sm_chain PF00988.22 ORF131230 - 0.062 13.1 2.3 6 6.7 0.1 2.1 2 0 0 2 2 2 0 Carbamoyl-phosphate synthase small chain, CPSase domain LRRC37 PF15779.5 ORF131230 - 0.38 11.1 4.2 3.6 8.0 0.5 2.1 2 0 0 2 2 2 0 Leucine-rich repeat-containing protein 37 family CheR_N PF03705.15 ORF131230 - 7.3 6.4 7.8 13 5.6 1.4 2.2 2 0 0 2 2 2 0 CheR methyltransferase, all-alpha domain DUF2985 PF11204.8 ORF130607 - 0.087 13.0 0.1 0.17 12.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2985) Notch PF00066.17 ORF130607 - 2.2 8.8 5.1 30 5.2 0.2 3.0 3 0 0 3 3 3 0 LNR domain K-cyclin_vir_C PF09080.10 ORF129674 - 0.06 13.8 0.1 0.096 13.1 0.1 1.4 1 1 0 1 1 1 0 K cyclin, C terminal 2C_adapt PF08793.10 ORF129221 - 3.3 8.0 10.0 27 5.1 0.2 3.9 2 1 0 2 2 2 0 2-cysteine adaptor domain ydhR PF08803.11 ORF127180 - 1.4e-41 140.3 0.0 1.6e-41 140.1 0.0 1.0 1 0 0 1 1 1 1 Putative mono-oxygenase ydhR DUF772 PF05598.11 ORF126439 - 0.033 14.2 0.3 0.053 13.5 0.3 1.3 1 0 0 1 1 1 0 Transposase domain (DUF772) X PF00739.19 ORF126373 - 0.51 10.4 7.3 0.74 9.9 7.3 1.4 1 1 0 1 1 1 0 Trans-activation protein X RAG1 PF12940.7 ORF123564 - 0.066 11.3 0.0 0.066 11.3 0.0 1.0 1 0 0 1 1 1 0 Recombination-activation protein 1 (RAG1), recombinase DUF4156 PF13698.6 ORF123266 - 0.11 12.8 0.4 0.18 12.1 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) SnoaL_4 PF13577.6 ORF122658 - 0.018 15.2 0.5 0.02 15.0 0.5 1.2 1 0 0 1 1 1 0 SnoaL-like domain PARP PF00644.20 ORF122532 - 0.04 13.5 1.8 0.042 13.4 1.8 1.1 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain RR_TM4-6 PF06459.12 ORF122532 - 0.069 13.0 9.5 0.082 12.7 9.5 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 GAGA_bind PF06217.12 ORF122532 - 0.1 12.8 6.4 0.12 12.7 6.4 1.0 1 0 0 1 1 1 0 GAGA binding protein-like family G6B PF15096.6 ORF122378 - 0.036 13.8 0.3 0.041 13.7 0.3 1.1 1 0 0 1 1 1 0 G6B family FlgN PF05130.12 ORF122128 - 0.1 13.1 7.0 0.13 12.8 7.0 1.2 1 0 0 1 1 1 0 FlgN protein KIP1 PF07765.12 ORF122128 - 8.1 6.6 10.6 0.28 11.3 0.9 2.4 2 1 0 2 2 2 0 KIP1-like protein Asp PF00026.23 ORF121070 - 0.00019 20.9 0.0 0.0003 20.3 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Cornichon PF03311.14 ORF121070 - 0.022 15.1 0.1 0.033 14.5 0.1 1.4 1 0 0 1 1 1 0 Cornichon protein zf-C2H2 PF00096.26 ORF119133 - 1.3e-16 60.0 13.9 5.9e-07 29.6 2.1 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF119133 - 5.4e-13 48.7 7.1 6.4e-06 26.4 2.0 2.5 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF119133 - 7.3e-11 41.9 11.2 0.00035 21.2 1.2 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_5 PF13909.6 ORF119133 - 3.3e-08 33.1 3.0 3.3e-08 33.1 3.0 3.4 4 0 0 4 4 4 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF119133 - 6.8e-05 23.1 6.7 0.00017 21.8 1.0 2.1 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF119133 - 0.0022 17.7 1.8 0.0045 16.7 0.1 2.1 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-met PF12874.7 ORF119133 - 0.021 15.2 12.1 0.69 10.4 1.4 3.6 3 1 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF119133 - 0.033 14.5 6.9 0.13 12.6 5.6 2.3 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Zn-ribbon_8 PF09723.10 ORF119133 - 0.043 13.9 6.3 0.23 11.6 0.2 2.7 3 0 0 3 3 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF119133 - 0.043 13.8 16.0 0.091 12.8 2.2 3.3 3 1 0 3 3 3 0 C2H2-type zinc finger zinc_ribbon_15 PF17032.5 ORF119133 - 0.053 14.3 5.3 0.055 14.2 4.3 1.5 1 1 1 2 2 2 0 zinc-ribbon family CxC3 PF18804.1 ORF119133 - 0.076 12.9 1.5 0.13 12.1 1.5 1.5 1 1 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases C1_4 PF07975.12 ORF119133 - 0.3 11.4 6.1 4.8 7.5 0.6 2.6 2 1 1 3 3 3 0 TFIIH C1-like domain PyrI_C PF02748.15 ORF119133 - 0.56 10.1 8.6 1.4 8.9 0.3 2.7 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-AN1 PF01428.16 ORF119133 - 1 9.6 9.1 6.9 6.9 0.3 3.3 4 0 0 4 4 3 0 AN1-like Zinc finger zf-C2HE PF16278.5 ORF119133 - 1.2 9.6 7.6 0.89 10.1 1.1 2.4 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger C1_2 PF03107.16 ORF119133 - 2.1 8.8 7.5 9 6.7 0.7 2.8 3 0 0 3 3 2 0 C1 domain Rubredoxin_2 PF18073.1 ORF119133 - 4.2 7.2 8.6 9.4 6.1 0.4 2.8 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-BED PF02892.15 ORF119133 - 8.4 6.5 10.5 4.8 7.3 0.5 2.8 2 1 1 3 3 3 0 BED zinc finger Ly49 PF08391.10 ORF118437 - 0.00018 21.9 2.7 0.00021 21.7 2.7 1.1 1 0 0 1 1 1 1 Ly49-like protein, N-terminal region RNA_pol_Rpc4 PF05132.14 ORF118126 - 2.3 8.7 8.2 0.84 10.1 3.4 2.2 1 1 1 2 2 2 0 RNA polymerase III RPC4 Ocnus PF05005.15 ORF117757 - 4.7e-32 110.3 0.2 6e-32 110.0 0.2 1.1 1 0 0 1 1 1 1 Janus/Ocnus family (Ocnus) Herpeto_peptide PF14409.6 ORF117501 - 0.012 15.8 17.5 0.22 11.8 0.5 3.2 1 1 2 3 3 3 0 Ribosomally synthesized peptide in Herpetosiphon TRAM_LAG1_CLN8 PF03798.16 ORF117086 - 0.091 12.5 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 TLC domain TIL PF01826.17 ORF116855 - 0.028 14.7 5.0 0.04 14.2 5.0 1.2 1 0 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain DUF4795 PF16043.5 ORF116385 - 0.084 12.5 2.5 2.3 7.8 0.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DASH_Dam1 PF08653.10 ORF116385 - 0.13 12.1 0.8 4.1 7.3 0.3 2.7 2 2 0 2 2 2 0 DASH complex subunit Dam1 IRK PF01007.20 ORF116368 - 0.068 13.0 0.1 0.12 12.2 0.0 1.4 1 1 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain Phage_holin_2_3 PF16080.5 ORF116368 - 0.08 12.7 1.5 0.18 11.6 1.5 1.5 1 0 0 1 1 1 0 Bacteriophage holin family HP1 SGS PF05002.15 ORF116098 - 0.092 12.9 1.1 0.21 11.7 1.1 1.7 1 1 0 1 1 1 0 SGS domain Deltaretro_Tax PF05599.11 ORF115162 - 0.33 11.5 2.6 0.45 11.1 1.9 1.6 1 1 1 2 2 2 0 Deltaretrovirus Tax protein Apt1 PF10351.9 ORF113561 - 5.3 5.8 8.8 5.8 5.7 8.8 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Miga PF10265.9 ORF113561 - 6.3 5.7 7.4 6.2 5.7 7.4 1.0 1 0 0 1 1 1 0 Mitoguardin PSD1 PF07587.11 ORF113304 - 0.13 11.7 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1553) DUF1495 PF07381.11 ORF113048 - 0.078 12.8 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) Arteri_Gl PF00951.18 ORF112299 - 0.4 10.5 5.7 0.47 10.2 5.7 1.2 1 1 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF4656 PF15551.6 ORF112299 - 10 5.6 9.5 10 5.5 9.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) LRR_RI_capping PF18779.1 ORF111481 - 0.064 12.9 0.4 0.14 11.9 0.4 1.5 1 0 0 1 1 1 0 Capping Ribonuclease inhibitor Leucine Rich Repeat AdoHcyase PF05221.17 ORF111481 - 0.21 10.7 1.1 0.24 10.5 1.1 1.1 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase IQ PF00612.27 ORF111084 - 0.00017 21.1 7.4 0.39 10.6 0.0 4.2 4 0 0 4 4 4 2 IQ calmodulin-binding motif Nore1-SARAH PF16517.5 ORF111084 - 1.9 8.5 16.6 2.1 8.3 6.0 2.9 1 1 1 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain ArfGap PF01412.18 ORF111084 - 7.7 6.6 20.1 7.7 6.6 5.4 2.2 1 1 1 2 2 2 0 Putative GTPase activating protein for Arf Cpn60_TCP1 PF00118.24 ORF110945 - 5.3e-24 84.7 0.0 5.8e-24 84.6 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Knl1_RWD_C PF18210.1 ORF110945 - 0.026 15.0 0.0 0.03 14.8 0.0 1.2 1 0 0 1 1 1 0 Knl1 RWD C-terminal domain DBI_PRT PF02277.17 ORF108813 - 2.6e-36 125.5 2.3 2.9e-36 125.4 2.3 1.0 1 0 0 1 1 1 1 Phosphoribosyltransferase Ras PF00071.22 ORF108505 - 0.00027 20.6 0.1 0.00033 20.3 0.1 1.1 1 0 0 1 1 1 1 Ras family DUF4768 PF15989.5 ORF108433 - 0.039 13.9 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) MgtE PF01769.16 ORF108375 - 0.13 12.6 5.5 0.14 12.5 5.1 1.3 1 1 0 1 1 1 0 Divalent cation transporter MPDZ_u10 PF16667.5 ORF107272 - 0.082 13.8 1.2 0.082 13.8 1.2 1.9 1 1 1 2 2 2 0 Unstructured region 10 on multiple PDZ protein Rab5ip PF07019.12 ORF106763 - 2.5e-14 53.6 8.7 3e-14 53.4 8.7 1.1 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) DUF92 PF01940.16 ORF106763 - 0.0027 17.2 0.3 0.0031 16.9 0.3 1.1 1 0 0 1 1 1 1 Integral membrane protein DUF92 Colicin_V PF02674.16 ORF106763 - 0.052 13.5 4.9 0.068 13.1 4.9 1.2 1 0 0 1 1 1 0 Colicin V production protein DUF485 PF04341.12 ORF106763 - 0.38 10.7 5.0 0.47 10.5 3.7 1.9 1 1 1 2 2 2 0 Protein of unknown function, DUF485 YIEGIA PF14045.6 ORF106664 - 0.032 13.1 0.0 0.032 13.1 0.0 1.0 1 0 0 1 1 1 0 YIEGIA protein IL17R_D_N PF16742.5 ORF106664 - 0.053 13.6 0.5 0.09 12.8 0.5 1.4 1 0 0 1 1 1 0 N-terminus of interleukin 17 receptor D PBP_like PF12727.7 ORF106587 - 0.14 11.3 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 PBP superfamily domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks244.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks244.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks244.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks244.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GTP_EFTU_D4 PF14578.6 ORF106062 - 0.054 13.4 0.1 0.075 12.9 0.1 1.2 1 0 0 1 1 1 0 Elongation factor Tu domain 4 p450 PF00067.22 ORF105951 - 2.3e-20 72.8 0.1 2.6e-20 72.6 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 COX7C PF02935.16 ORF105951 - 0.096 13.0 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc RWP-RK PF02042.15 ORF105019 - 0.091 12.8 1.5 0.15 12.0 1.5 1.3 1 0 0 1 1 1 0 RWP-RK domain AKAP95 PF04988.12 ORF104265 - 0.067 13.4 0.6 0.095 12.9 0.6 1.3 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) zf-RanBP PF00641.18 ORF104265 - 3.2 7.2 9.3 0.17 11.2 2.1 2.5 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others eIF_4EBP PF05456.11 ORF103181 - 0.22 11.5 2.2 1.2 9.1 0.1 2.2 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Roc PF08477.13 ORF102136 - 1.3e-12 48.0 0.0 1.5e-12 47.8 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF102136 - 1.9e-12 47.1 0.1 2.2e-12 46.9 0.1 1.1 1 0 0 1 1 1 1 Ras family MMR_HSR1 PF01926.23 ORF102136 - 0.048 13.7 0.0 0.08 13.0 0.0 1.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase Arf PF00025.21 ORF102136 - 0.056 12.9 0.0 0.059 12.8 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family Spore_IV_A PF09547.10 ORF102136 - 0.075 12.0 0.0 0.088 11.7 0.0 1.2 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) TniB PF05621.11 ORF102136 - 0.075 12.4 0.0 0.09 12.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein AAA PF00004.29 ORF102136 - 0.14 12.6 0.0 0.38 11.2 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 ORF102136 - 0.18 11.3 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region T3SS_ATPase_C PF18269.1 ORF101927 - 4.1e-05 23.4 0.4 0.0002 21.1 0.4 1.9 1 1 0 1 1 1 1 T3SS EscN ATPase C-terminal domain CH_2 PF06294.11 ORF101927 - 0.0019 18.3 0.0 0.091 12.9 0.0 2.0 1 1 1 2 2 2 1 CH-like domain in sperm protein DUF1858 PF08984.11 ORF101927 - 0.0092 16.1 0.0 0.019 15.1 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF1858) BRE1 PF08647.11 ORF100729 - 0.023 14.7 3.7 0.094 12.8 3.8 1.9 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase VD10_N PF08476.10 ORF100729 - 0.083 12.6 1.9 3 7.6 0.0 2.3 2 0 0 2 2 2 0 Viral D10 N-terminal DUF5301 PF17225.3 ORF100467 - 1.4 9.4 6.3 0.93 10.0 3.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5300) Insulin_TMD PF17870.1 NODE_54354_length_322_cov_1.299652_g46423_i0reverse_frame_1 - 0.065 13.3 0.1 0.093 12.8 0.1 1.2 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment TMEMspv1-c74-12 PF11044.8 NODE_54354_length_322_cov_1.299652_g46423_i0forward_frame_1 - 2 8.4 0.0 2 8.4 0.0 2.7 3 0 0 3 3 3 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein zf-RING_11 PF17123.5 NODE_54353_length_322_cov_1.344948_g46422_i0forward_frame_1 - 0.012 15.3 6.4 0.039 13.7 1.4 2.6 2 0 0 2 2 2 0 RING-like zinc finger zf-RING_2 PF13639.6 NODE_54353_length_322_cov_1.344948_g46422_i0forward_frame_1 - 0.11 12.9 5.2 2.2 8.7 5.2 2.4 1 1 0 1 1 1 0 Ring finger domain DUF5381 PF17353.2 NODE_54352_length_322_cov_1.362369_g46421_i0forward_frame_1 - 1.2 8.9 8.7 1.6 8.5 8.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) DUF4131 PF13567.6 NODE_54350_length_322_cov_1.393728_g46419_i0reverse_frame_1 - 0.19 11.4 0.1 0.24 11.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF4083 PF13314.6 NODE_54336_length_322_cov_1.923345_g46405_i0reverse_frame_1 - 0.026 14.5 1.1 0.044 13.7 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) ssDBP_DBD PF18361.1 NODE_54332_length_322_cov_2.000000_g46401_i0reverse_frame_1 - 0.046 13.8 0.1 0.13 12.3 0.0 1.7 1 1 1 2 2 2 0 Single stranded DNA-binding protein ss DNA binding domain Phage_integrase PF00589.22 NODE_54331_length_322_cov_2.041812_g46400_i0reverse_frame_1 - 0.031 14.1 0.0 0.034 14.0 0.0 1.1 1 0 0 1 1 1 0 Phage integrase family Clat_adaptor_s PF01217.20 NODE_54327_length_322_cov_2.226481_g46396_i0forward_frame_1 - 0.09 12.7 0.1 0.098 12.6 0.1 1.2 1 0 0 1 1 1 0 Clathrin adaptor complex small chain DUF3331 PF11811.8 NODE_54327_length_322_cov_2.226481_g46396_i0forward_frame_1 - 0.13 12.1 0.7 0.18 11.7 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) PIG-F PF06699.11 NODE_54313_length_322_cov_2.599303_g46382_i0reverse_frame_1 - 0.035 14.3 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F MIF4G_like_2 PF09090.11 NODE_54313_length_322_cov_2.599303_g46382_i0reverse_frame_1 - 0.095 12.2 0.3 0.096 12.1 0.3 1.1 1 0 0 1 1 1 0 MIF4G like AAA_PrkA PF08298.11 NODE_54310_length_322_cov_2.766551_g46379_i0reverse_frame_1 - 3.1e-46 157.9 0.1 3.4e-46 157.8 0.1 1.0 1 0 0 1 1 1 1 PrkA AAA domain CSRNP_N PF16019.5 NODE_54310_length_322_cov_2.766551_g46379_i0forward_frame_1 - 0.54 10.1 9.7 0.61 10.0 9.7 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Catalase-rel PF06628.12 NODE_54305_length_322_cov_3.121951_g46374_i0forward_frame_1 - 3.1e-15 56.1 0.0 4.2e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 Catalase-related immune-responsive Lactate_perm PF02652.14 NODE_54303_length_322_cov_3.480836_g46372_i0reverse_frame_1 - 8.1e-47 160.1 11.7 8.9e-47 160.0 11.7 1.0 1 0 0 1 1 1 1 L-lactate permease DUF4501 PF14946.6 NODE_54301_length_322_cov_3.578397_g46370_i0forward_frame_1 - 8.3 6.5 5.9 78 3.3 5.9 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4501) DUF3362 PF11842.8 NODE_54291_length_322_cov_65.473868_g46360_i0forward_frame_1 - 0.061 13.6 0.1 0.093 13.0 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3362) EcsB PF05975.12 NODE_54286_length_322_cov_72.080139_g46355_i0forward_frame_1 - 0.45 9.3 0.6 0.47 9.3 0.6 1.1 1 0 0 1 1 1 0 Bacterial ABC transporter protein EcsB TBD PF12845.7 NODE_54282_length_322_cov_81.811847_g46351_i0reverse_frame_1 - 0.026 14.4 0.8 0.075 12.9 0.6 1.8 2 0 0 2 2 2 0 TBD domain WRKY PF03106.15 NODE_54275_length_322_cov_87.641115_g46344_i0reverse_frame_1 - 0.14 12.4 0.4 0.14 12.4 0.4 2.4 1 1 1 2 2 2 0 WRKY DNA -binding domain DUF2688 PF10892.8 NODE_54272_length_322_cov_100.069686_g46341_i0reverse_frame_1 - 0.12 11.8 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) DUF2024 PF09630.10 NODE_54268_length_322_cov_121.397213_g46337_i0reverse_frame_1 - 0.16 11.9 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) YwiC PF14256.6 NODE_54257_length_322_cov_209.982578_g46326_i0reverse_frame_1 - 0.1 12.9 0.2 0.14 12.4 0.2 1.1 1 0 0 1 1 1 0 YwiC-like protein SAGA-Tad1 PF12767.7 NODE_54256_length_322_cov_230.975610_g46325_i0reverse_frame_1 - 0.032 14.0 0.2 0.038 13.7 0.2 1.2 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit Colicin_K PF17500.2 NODE_54256_length_322_cov_230.975610_g46325_i0forward_frame_1 - 0.0063 17.0 3.0 0.0072 16.8 3.0 1.2 1 0 0 1 1 1 1 Colicin-K TFIIIC_delta PF12657.7 NODE_54243_length_322_cov_2674.062718_g46312_i0forward_frame_1 - 0.15 12.0 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Transcription factor IIIC subunit delta N-term Cu_bind_like PF02298.17 NODE_54235_length_323_cov_1.496528_g46304_i0reverse_frame_1 - 0.21 11.6 1.0 0.3 11.1 1.0 1.2 1 0 0 1 1 1 0 Plastocyanin-like domain DUF3024 PF11225.8 NODE_54234_length_323_cov_1.545139_g46303_i0forward_frame_1 - 0.14 12.4 1.2 0.19 12.0 0.1 1.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3024) FHA PF00498.26 NODE_54232_length_323_cov_1.586806_g46301_i0forward_frame_1 - 8.3e-08 32.5 0.1 1.3e-07 31.9 0.1 1.3 1 1 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_54232_length_323_cov_1.586806_g46301_i0forward_frame_1 - 0.00084 19.6 0.0 0.0014 18.9 0.0 1.4 1 1 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain UPF0253 PF06786.12 NODE_54230_length_323_cov_1.638889_g46299_i0forward_frame_1 - 3.5e-08 33.6 0.5 5.3e-08 33.0 0.5 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0253) Trimer_CC PF08954.11 NODE_54228_length_323_cov_1.680556_g46297_i0reverse_frame_1 - 0.16 11.5 0.4 0.38 10.3 0.4 1.5 1 0 0 1 1 1 0 Trimerisation motif P2X_receptor PF00864.19 NODE_54228_length_323_cov_1.680556_g46297_i0reverse_frame_1 - 0.26 10.3 0.5 0.3 10.1 0.5 1.0 1 0 0 1 1 1 0 ATP P2X receptor Neur_chan_memb PF02932.16 NODE_54227_length_323_cov_1.708333_g46296_i0reverse_frame_1 - 0.086 12.9 0.4 0.1 12.6 0.4 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Neisseria_TspB PF05616.13 NODE_54227_length_323_cov_1.708333_g46296_i0reverse_frame_1 - 0.58 8.6 8.5 0.56 8.6 8.5 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein WD40 PF00400.32 NODE_54224_length_323_cov_1.854167_g46293_i0reverse_frame_1 - 4.2e-05 24.2 0.0 0.05 14.5 0.0 2.4 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_54224_length_323_cov_1.854167_g46293_i0reverse_frame_1 - 0.0074 16.6 0.0 0.012 15.9 0.0 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 NODE_54224_length_323_cov_1.854167_g46293_i0reverse_frame_1 - 0.034 12.8 0.0 0.51 8.9 0.0 1.9 1 1 1 2 2 2 0 Nucleoporin Nup120/160 AAA_5 PF07728.14 NODE_54223_length_323_cov_1.861111_g46292_i0reverse_frame_1 - 0.045 13.7 0.0 0.045 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Mqo PF06039.15 NODE_54221_length_323_cov_1.927083_g46290_i0forward_frame_1 - 0.0072 14.9 0.3 0.0073 14.9 0.3 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) AD PF09793.9 NODE_54216_length_323_cov_2.090278_g46285_i0reverse_frame_1 - 0.054 13.6 1.0 0.16 12.1 0.6 1.9 2 0 0 2 2 2 0 Anticodon-binding domain GPR15L PF15854.5 NODE_54216_length_323_cov_2.090278_g46285_i0forward_frame_1 - 1.6 9.0 4.2 4.9 7.5 0.1 2.3 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 VWC PF00093.18 NODE_54205_length_323_cov_2.378472_g46274_i0reverse_frame_1 - 0.0073 16.6 2.0 0.011 16.0 2.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type C domain PUFD PF16553.5 NODE_54204_length_323_cov_2.475694_g46273_i0reverse_frame_1 - 0.064 13.4 0.2 0.077 13.1 0.2 1.3 1 0 0 1 1 1 0 BCORL-PCGF1-binding domain Myb_DNA-bind_6 PF13921.6 NODE_54199_length_323_cov_2.670139_g46268_i0reverse_frame_1 - 0.021 15.1 0.3 0.043 14.1 0.3 1.5 1 1 0 1 1 1 0 Myb-like DNA-binding domain Cas_TM1802 PF09484.10 NODE_54196_length_323_cov_2.815972_g46265_i0reverse_frame_1 - 0.1 11.3 1.4 0.12 11.1 1.4 1.0 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) TcA_RBD PF18518.1 NODE_54195_length_323_cov_3.736111_g46264_i0reverse_frame_1 - 0.049 13.9 0.9 0.054 13.8 0.9 1.1 1 0 0 1 1 1 0 TcA receptor binding domain Kelch_4 PF13418.6 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 4e-12 46.0 2.2 1.9e-06 27.8 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 2.2e-09 37.3 1.4 1.2e-06 28.5 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 1e-08 35.0 0.7 0.0019 18.1 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 1.1e-08 34.5 4.2 7.4e-06 25.5 0.5 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 5e-07 29.8 0.8 0.0009 19.5 0.0 2.3 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_1 - 0.00014 21.7 6.2 0.026 14.5 0.9 2.9 2 1 0 2 2 2 2 Kelch motif SAWADEE PF16719.5 NODE_54189_length_323_cov_4.937500_g46258_i0forward_frame_1 - 0.025 14.6 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 SAWADEE domain zf-primase PF09329.11 NODE_54188_length_323_cov_10.847222_g46257_i0forward_frame_1 - 0.043 13.6 0.2 0.11 12.3 0.2 1.7 1 0 0 1 1 1 0 Primase zinc finger DUF648 PF04890.13 NODE_54186_length_323_cov_41.586806_g46255_i0forward_frame_1 - 0.052 13.3 0.1 0.069 12.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF648) Syntaxin_2 PF14523.6 NODE_54184_length_323_cov_44.822917_g46253_i0forward_frame_1 - 0.024 15.0 1.7 0.043 14.2 1.6 1.4 1 1 0 1 1 1 0 Syntaxin-like protein PH PF00169.29 NODE_54182_length_323_cov_54.357639_g46251_i0forward_frame_1 - 0.0031 18.0 0.0 0.0043 17.5 0.0 1.3 1 0 0 1 1 1 1 PH domain DUF1279 PF06916.13 NODE_54182_length_323_cov_54.357639_g46251_i0forward_frame_1 - 0.08 13.5 0.0 0.11 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1279) PknG_rubred PF16919.5 NODE_54172_length_323_cov_72.659722_g46241_i0forward_frame_1 - 0.034 14.3 0.7 0.068 13.3 0.1 1.7 1 1 1 2 2 2 0 Protein kinase G rubredoxin domain DUF3720 PF12517.8 NODE_54166_length_323_cov_82.656250_g46235_i0forward_frame_1 - 0.065 14.2 4.7 0.093 13.7 4.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3720) zf-C2H2_7 PF15269.6 NODE_54162_length_323_cov_98.041667_g46231_i0reverse_frame_1 - 0.016 15.3 0.1 0.031 14.4 0.1 1.5 1 0 0 1 1 1 0 Zinc-finger PPR_2 PF13041.6 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 4.1e-14 52.5 0.1 4.1e-11 42.9 0.0 2.0 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 8.9e-10 38.5 0.0 2.3e-06 27.6 0.0 1.7 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 1.2e-09 37.8 0.1 1.1e-05 25.3 0.0 2.1 2 0 0 2 2 2 2 PPR repeat PPR_1 PF12854.7 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 1.5e-06 27.8 3.0 3.9e-05 23.3 0.0 2.9 3 1 0 3 3 3 1 PPR repeat Clathrin PF00637.20 NODE_54160_length_323_cov_106.152778_g46229_i0forward_frame_1 - 0.0012 18.7 0.0 0.86 9.5 0.0 2.1 1 1 0 2 2 2 2 Region in Clathrin and VPS Transformer PF06495.11 NODE_54157_length_323_cov_122.732639_g46226_i0forward_frame_1 - 0.036 14.2 5.8 0.042 13.9 5.8 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein SYCP2_ARLD PF18581.1 NODE_54153_length_323_cov_139.135417_g46222_i0forward_frame_1 - 0.024 14.7 0.1 0.03 14.3 0.1 1.1 1 0 0 1 1 1 0 Synaptonemal complex 2 armadillo-repeat-like domain GerE PF00196.19 NODE_54149_length_323_cov_190.079861_g46218_i0reverse_frame_1 - 0.16 11.5 0.0 0.35 10.4 0.0 1.5 1 1 1 2 2 2 0 Bacterial regulatory proteins, luxR family IQ PF00612.27 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 3.5e-09 35.7 13.5 0.0012 18.4 0.7 3.2 3 0 0 3 3 3 3 IQ calmodulin-binding motif GP67 PF17634.2 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 0.0051 17.2 1.5 1.7 9.1 0.1 2.1 1 1 1 2 2 2 2 Gene product 67 DUF3072 PF11272.8 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 0.013 15.3 5.0 1.3 9.0 0.7 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3072) CENP-B_dimeris PF09026.10 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 0.015 15.6 0.8 1.3 9.5 0.1 2.1 2 0 0 2 2 2 0 Centromere protein B dimerisation domain Planc_extracel PF07595.12 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_1 - 0.21 11.4 7.2 4.9 7.1 0.8 2.8 2 0 0 2 2 2 0 Planctomycete extracellular Spo7_2_N PF15407.6 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_1 - 0.26 10.9 4.2 7.2 6.3 0.3 2.8 2 2 0 2 2 2 0 Sporulation protein family 7 DUF5378 PF17349.2 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_1 - 0.76 9.0 5.1 5.5 6.2 1.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5378) Fer2 PF00111.27 NODE_54138_length_323_cov_6261.593750_g46208_i0forward_frame_1 - 3.6e-05 23.6 0.1 3.6e-05 23.6 0.1 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain REC114-like PF15165.6 NODE_54136_length_324_cov_1.328720_g46206_i0reverse_frame_1 - 0.0046 16.8 0.0 0.0051 16.6 0.0 1.1 1 0 0 1 1 1 1 Meiotic recombination protein REC114-like DnaJ_C PF01556.18 NODE_54128_length_324_cov_1.719723_g46198_i0forward_frame_1 - 8.5e-14 51.9 0.0 9.7e-14 51.7 0.0 1.0 1 0 0 1 1 1 1 DnaJ C terminal domain PID_2 PF14719.6 NODE_54125_length_324_cov_1.844291_g46195_i0reverse_frame_1 - 0.08 12.8 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) Form-deh_trans PF09163.11 NODE_54116_length_324_cov_2.193772_g46186_i0reverse_frame_1 - 0.054 13.3 0.0 0.088 12.6 0.0 1.3 1 0 0 1 1 1 0 Formate dehydrogenase N, transmembrane TraP PF07296.11 NODE_54114_length_324_cov_2.301038_g46184_i0reverse_frame_1 - 0.023 13.9 0.2 0.026 13.7 0.2 1.0 1 0 0 1 1 1 0 TraP protein DUF1925 PF09094.11 NODE_54108_length_324_cov_2.598616_g46178_i0forward_frame_1 - 0.14 12.4 0.3 0.23 11.8 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1925) Nitr_red_alph_N PF14710.6 NODE_54100_length_324_cov_3.128028_g46170_i0reverse_frame_1 - 2e-18 66.6 4.9 2.7e-18 66.1 4.0 1.7 2 0 0 2 2 2 1 Respiratory nitrate reductase alpha N-terminal Molybdop_Fe4S4 PF04879.16 NODE_54100_length_324_cov_3.128028_g46170_i0reverse_frame_1 - 0.00048 20.1 0.2 0.00073 19.5 0.2 1.4 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain CagZ PF09053.10 NODE_54091_length_324_cov_53.224913_g46161_i0reverse_frame_1 - 0.014 15.0 0.2 0.018 14.7 0.2 1.1 1 0 0 1 1 1 0 CagZ DUF717 PF05338.12 NODE_54091_length_324_cov_53.224913_g46161_i0forward_frame_1 - 0.12 12.5 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF717) DUF3300 PF11737.8 NODE_54090_length_324_cov_54.567474_g46160_i0reverse_frame_1 - 0.28 10.7 1.2 0.32 10.5 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3300) DUF2866 PF11065.8 NODE_54086_length_324_cov_64.965398_g46156_i0forward_frame_1 - 0.13 12.3 0.9 0.19 11.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2866) 23S_rRNA_IVP PF05635.11 NODE_54083_length_324_cov_71.346021_g46153_i0reverse_frame_1 - 0.069 13.5 0.0 0.098 13.0 0.0 1.3 1 0 0 1 1 1 0 23S rRNA-intervening sequence protein Keratin_B2_2 PF13885.6 NODE_54083_length_324_cov_71.346021_g46153_i0forward_frame_1 - 0.8 9.7 10.1 0.43 10.6 6.0 2.2 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein Gemini_AL1 PF00799.20 NODE_54074_length_324_cov_92.186851_g46144_i0reverse_frame_1 - 0.041 14.2 0.4 0.049 14.0 0.4 1.2 1 0 0 1 1 1 0 Geminivirus Rep catalytic domain Connexin PF00029.19 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_1 - 0.49 10.1 6.2 0.51 10.1 6.2 1.1 1 0 0 1 1 1 0 Connexin Atg14 PF10186.9 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_1 - 0.53 9.3 15.7 0.6 9.1 15.7 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5427 PF10310.9 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_1 - 1.5 7.6 13.0 1.7 7.5 13.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5427) O-antigen_lig PF13425.6 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_1 - 3.1 6.5 6.7 3.5 6.3 6.7 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein NPCC PF08058.11 NODE_54057_length_324_cov_185.667820_g46127_i0forward_frame_1 - 0.17 11.9 2.7 0.2 11.7 2.7 1.1 1 0 0 1 1 1 0 Nuclear pore complex component FDC-SP PF15215.6 NODE_54052_length_324_cov_244.664360_g46122_i0reverse_frame_1 - 0.041 14.4 0.0 0.041 14.4 0.0 1.6 2 0 0 2 2 2 0 Follicular dendritic cell secreted peptide Defensin_big PF14862.6 NODE_54051_length_324_cov_275.377163_g46121_i0forward_frame_1 - 0.25 11.7 4.0 0.55 10.6 4.0 1.7 1 1 0 1 1 1 0 Big defensin DUF1138 PF06592.13 NODE_54048_length_324_cov_1216.913495_g46118_i0reverse_frame_1 - 0.012 15.6 0.0 0.02 15.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1138) Fer2 PF00111.27 NODE_54045_length_324_cov_6142.958478_g46115_i0reverse_frame_1 - 3.2e-05 23.8 0.8 4.1e-05 23.5 0.1 1.5 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain RANK_CRD_2 PF18278.1 NODE_54043_length_325_cov_1.024138_g46113_i0reverse_frame_3 - 0.098 12.8 0.1 0.18 12.0 0.1 1.4 1 0 0 1 1 1 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 LRR_5 PF13306.6 NODE_54039_length_325_cov_1.324138_g46109_i0reverse_frame_2 - 0.021 14.8 3.5 0.023 14.6 3.5 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) FAM209 PF15206.6 NODE_54039_length_325_cov_1.324138_g46109_i0reverse_frame_2 - 0.1 12.4 0.3 0.13 12.1 0.3 1.2 1 0 0 1 1 1 0 FAM209 family DUF5560 PF17715.1 NODE_54038_length_325_cov_1.417241_g46108_i0forward_frame_2 - 0.049 13.1 2.0 0.059 12.8 2.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) DUF2721 PF11026.8 NODE_54037_length_325_cov_1.427586_g46107_i0reverse_frame_3 - 0.0034 17.2 0.4 0.0041 17.0 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2721) Solute_trans_a PF03619.16 NODE_54037_length_325_cov_1.427586_g46107_i0reverse_frame_3 - 0.021 14.3 0.3 0.027 14.0 0.3 1.1 1 0 0 1 1 1 0 Organic solute transporter Ostalpha COX_ARM PF06481.14 NODE_54036_length_325_cov_1.468966_g46106_i0reverse_frame_3 - 5.3e-14 51.8 0.3 8.1e-14 51.2 0.3 1.2 1 0 0 1 1 1 1 COX Aromatic Rich Motif Acyltransferase PF01553.21 NODE_54036_length_325_cov_1.468966_g46106_i0forward_frame_2 - 0.025 14.2 0.2 0.037 13.6 0.2 1.2 1 0 0 1 1 1 0 Acyltransferase FAM86 PF14904.6 NODE_54035_length_325_cov_1.489655_g46105_i0reverse_frame_2 - 0.026 14.6 1.5 0.069 13.2 1.5 2.0 1 1 0 1 1 1 0 Family of unknown function MNNL PF07657.13 NODE_54035_length_325_cov_1.489655_g46105_i0forward_frame_3 - 9.8 6.3 11.8 1.7 8.8 4.8 2.2 1 1 1 2 2 2 0 N terminus of Notch ligand NICE-1 PF15845.5 NODE_54033_length_325_cov_1.617241_g46103_i0reverse_frame_3 - 0.093 13.5 5.4 0.12 13.1 5.4 1.2 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family tRNA-synt_1e PF01406.19 NODE_54023_length_325_cov_2.113793_g46093_i0reverse_frame_3 - 8.5e-49 166.5 0.6 9.3e-49 166.4 0.6 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 NODE_54023_length_325_cov_2.113793_g46093_i0reverse_frame_3 - 3.3e-08 32.7 0.2 3.7e-08 32.5 0.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 NODE_54023_length_325_cov_2.113793_g46093_i0reverse_frame_3 - 1e-06 27.3 0.0 1.2e-06 27.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 NODE_54023_length_325_cov_2.113793_g46093_i0reverse_frame_3 - 3.3e-06 26.3 0.0 3.4e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) Imm52 PF15579.6 NODE_54019_length_325_cov_2.282759_g46089_i0reverse_frame_2 - 0.061 13.2 0.3 0.24 11.3 0.0 2.1 1 1 2 3 3 3 0 Immunity protein 52 RCC1_2 PF13540.6 NODE_54019_length_325_cov_2.282759_g46089_i0forward_frame_2 - 2.8e-06 26.9 5.3 0.13 12.1 0.3 3.5 3 1 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat SIS_2 PF13580.6 NODE_54019_length_325_cov_2.282759_g46089_i0forward_frame_2 - 0.00071 19.6 0.4 0.0013 18.8 0.4 1.5 1 1 0 1 1 1 1 SIS domain DUF1455 PF07306.11 NODE_54019_length_325_cov_2.282759_g46089_i0forward_frame_2 - 0.056 13.4 1.3 0.064 13.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1455) U6-snRNA_bdg PF10596.9 NODE_54014_length_325_cov_2.634483_g46084_i0reverse_frame_3 - 0.0077 16.2 0.3 0.0092 15.9 0.3 1.1 1 0 0 1 1 1 1 U6-snRNA interacting domain of PrP8 Metallothio PF00131.20 NODE_54009_length_325_cov_2.868966_g46079_i0reverse_frame_2 - 0.7 10.1 14.0 0.36 11.0 8.9 2.0 2 0 0 2 2 2 0 Metallothionein ELH PF02323.15 NODE_54006_length_325_cov_3.003448_g46076_i0forward_frame_3 - 0.038 13.3 2.5 0.056 12.8 2.5 1.2 1 0 0 1 1 1 0 Egg-laying hormone precursor Siva PF05458.12 NODE_54006_length_325_cov_3.003448_g46076_i0forward_frame_3 - 0.13 11.9 5.7 0.23 11.1 5.8 1.4 1 1 0 1 1 1 0 Cd27 binding protein (Siva) DUF515 PF04415.12 NODE_54006_length_325_cov_3.003448_g46076_i0forward_frame_3 - 1.5 7.1 7.3 1.6 7.0 7.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) adh_short PF00106.25 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 3.7e-15 55.9 0.7 4.2e-15 55.7 0.7 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 3.1e-10 40.0 0.4 3.9e-10 39.7 0.4 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 6.7e-07 29.4 0.2 7.8e-07 29.2 0.2 1.1 1 0 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 0.00027 20.4 0.2 0.00032 20.2 0.2 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase THF_DHG_CYH_C PF02882.19 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 0.0014 18.0 0.1 0.0016 17.8 0.1 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 NODE_54004_length_325_cov_3.662069_g46074_i0reverse_frame_2 - 0.0022 17.5 0.1 0.0027 17.2 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family LysM PF01476.20 NODE_54003_length_325_cov_3.758621_g46073_i0forward_frame_2 - 1.8e-10 40.7 0.2 3.2e-10 39.9 0.2 1.4 1 0 0 1 1 1 1 LysM domain Enkurin PF13864.6 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.0094 16.4 3.0 0.012 16.0 3.0 1.3 1 0 0 1 1 1 1 Calmodulin-binding DUF1804 PF08822.11 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.049 13.6 0.5 0.05 13.6 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) FlxA PF14282.6 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.14 12.1 6.3 0.18 11.8 6.3 1.1 1 0 0 1 1 1 0 FlxA-like protein DivIC PF04977.15 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.19 11.5 6.1 4.5 7.1 1.4 2.3 1 1 1 2 2 2 0 Septum formation initiator NPV_P10 PF05531.12 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.53 10.8 4.8 0.86 10.1 4.8 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein FapA PF03961.13 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 0.6 8.7 7.8 0.65 8.5 7.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A bZIP_1 PF00170.21 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_3 - 4.2 7.5 9.6 3.6 7.7 2.9 2.9 1 1 2 3 3 3 0 bZIP transcription factor TIG_plexin PF17960.1 NODE_54002_length_325_cov_4.513793_g46072_i0reverse_frame_2 - 0.072 13.1 0.4 0.11 12.5 0.3 1.4 1 1 0 1 1 1 0 TIG domain Gaa1 PF04114.14 NODE_54001_length_325_cov_4.896552_g46071_i0reverse_frame_3 - 3.1 6.7 9.1 6.8 5.6 9.1 1.6 1 1 0 1 1 1 0 Gaa1-like, GPI transamidase component DUF5136 PF17199.4 NODE_54000_length_325_cov_6.455172_g46070_i0reverse_frame_3 - 0.072 12.8 0.1 0.15 11.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF5136) Herpes_IE68 PF02479.16 NODE_54000_length_325_cov_6.455172_g46070_i0forward_frame_3 - 1.7 8.2 6.8 0.74 9.4 1.9 2.1 1 1 1 2 2 2 0 Herpesvirus immediate early protein EndIII_4Fe-2S PF10576.9 NODE_53996_length_325_cov_10.475862_g46066_i0reverse_frame_3 - 3.8 8.0 7.4 15 6.0 0.6 2.5 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III DUF3273 PF11677.8 NODE_53996_length_325_cov_10.475862_g46066_i0reverse_frame_2 - 0.14 11.4 0.0 2.2 7.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3273) KSHV_K1 PF11049.8 NODE_53996_length_325_cov_10.475862_g46066_i0reverse_frame_2 - 0.15 12.0 2.4 2.2 8.3 0.1 2.1 2 0 0 2 2 2 0 Glycoprotein K1 of Kaposi's sarcoma-associated herpes virus Wzy_C PF04932.15 NODE_53996_length_325_cov_10.475862_g46066_i0forward_frame_3 - 0.14 11.8 0.8 0.26 10.9 0.7 1.6 1 1 0 1 1 1 0 O-Antigen ligase DUF3674 PF12426.8 NODE_53993_length_325_cov_48.031034_g46063_i0reverse_frame_3 - 0.039 14.0 0.1 0.07 13.2 0.1 1.4 1 0 0 1 1 1 0 RNA dependent RNA polymerase zf-RING_5 PF14634.6 NODE_53991_length_325_cov_49.027586_g46061_i0forward_frame_2 - 0.089 12.8 3.5 0.09 12.8 0.5 2.1 2 0 0 2 2 2 0 zinc-RING finger domain Fer4_19 PF06902.11 NODE_53989_length_325_cov_51.844828_g46059_i0forward_frame_2 - 0.055 13.6 1.1 0.099 12.7 1.1 1.4 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster ThrE PF06738.12 NODE_53989_length_325_cov_51.844828_g46059_i0forward_frame_2 - 0.082 12.3 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter RCC1_2 PF13540.6 NODE_53978_length_325_cov_68.486207_g46048_i0reverse_frame_2 - 0.084 12.7 0.9 0.38 10.6 0.0 2.3 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat 2OG-FeII_Oxy_3 PF13640.6 NODE_53977_length_325_cov_71.862069_g46047_i0reverse_frame_2 - 7.2e-08 33.2 0.0 8.9e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily RAG1_imp_bd PF12560.8 NODE_53977_length_325_cov_71.862069_g46047_i0forward_frame_3 - 2.4 7.6 9.0 2.8 7.4 9.0 1.1 1 0 0 1 1 1 0 RAG1 importin binding UvdE PF03851.14 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_3 - 0.016 14.5 0.8 0.017 14.4 0.8 1.1 1 0 0 1 1 1 0 UV-endonuclease UvdE MIT PF04212.18 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_2 - 0.0026 17.8 1.9 0.003 17.6 0.1 2.0 2 0 0 2 2 2 1 MIT (microtubule interacting and transport) domain ATP-gua_Ptrans PF00217.19 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_2 - 0.055 12.9 0.0 0.074 12.5 0.0 1.2 1 0 0 1 1 1 0 ATP:guanido phosphotransferase, C-terminal catalytic domain TPR_14 PF13428.6 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_2 - 0.082 13.8 0.1 0.18 12.7 0.0 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_53976_length_325_cov_74.179310_g46046_i0forward_frame_2 - 0.15 12.2 1.2 4.3 7.6 0.2 3.0 1 1 1 2 2 2 0 Tetratricopeptide repeat FTCD_N PF07837.12 NODE_53974_length_325_cov_77.086207_g46044_i0reverse_frame_3 - 0.071 12.9 0.0 0.077 12.8 0.0 1.1 1 0 0 1 1 1 0 Formiminotransferase domain, N-terminal subdomain ERAP1_C PF11838.8 NODE_53972_length_325_cov_81.948276_g46042_i0forward_frame_3 - 0.0048 16.5 0.0 0.0049 16.5 0.0 1.0 1 0 0 1 1 1 1 ERAP1-like C-terminal domain G6PD_N PF00479.22 NODE_53972_length_325_cov_81.948276_g46042_i0forward_frame_3 - 0.074 13.7 0.1 0.086 13.5 0.1 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, NAD binding domain zf-UBP_var PF17807.1 NODE_53971_length_325_cov_84.631034_g46041_i0forward_frame_3 - 0.096 12.5 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Variant UBP zinc finger SIR2 PF02146.17 NODE_53971_length_325_cov_84.631034_g46041_i0forward_frame_3 - 0.1 12.5 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Sir2 family zf-CCCH_3 PF15663.5 NODE_53967_length_325_cov_96.741379_g46037_i0forward_frame_3 - 0.0016 18.6 0.9 0.0018 18.5 0.9 1.2 1 0 0 1 1 1 1 Zinc-finger containing family IBR PF01485.21 NODE_53961_length_325_cov_138.958621_g46031_i0forward_frame_2 - 2.2e-05 24.6 4.6 2.2e-05 24.6 4.6 1.6 2 0 0 2 2 2 1 IBR domain, a half RING-finger domain zf-ribbon_3 PF13248.6 NODE_53961_length_325_cov_138.958621_g46031_i0forward_frame_2 - 0.21 11.1 0.4 0.21 11.1 0.4 3.3 4 0 0 4 4 4 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 NODE_53961_length_325_cov_138.958621_g46031_i0forward_frame_2 - 2.6 8.0 9.2 6.3 6.8 0.1 3.5 4 0 0 4 4 4 0 zinc-ribbon domain COPIIcoated_ERV PF07970.12 NODE_53960_length_325_cov_150.282759_g46030_i0reverse_frame_3 - 0.064 13.1 4.7 0.08 12.8 4.7 1.3 1 1 0 1 1 1 0 Endoplasmic reticulum vesicle transporter Ctr PF04145.15 NODE_53956_length_325_cov_268.275862_g46026_i0forward_frame_2 - 0.099 13.3 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Ctr copper transporter family DUF4485 PF14846.6 NODE_53953_length_325_cov_287.406897_g46023_i0reverse_frame_2 - 0.0045 17.0 0.6 0.0083 16.2 0.6 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4485) SPATA19 PF15212.6 NODE_53946_length_325_cov_2251.755172_g18917_i3reverse_frame_3 - 0.011 15.9 0.1 0.014 15.6 0.1 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial DUF5496 PF17600.2 NODE_53946_length_325_cov_2251.755172_g18917_i3reverse_frame_3 - 0.097 12.7 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5496) Metallothi_Euk2 PF12809.7 NODE_53945_length_325_cov_2313.813793_g46016_i0reverse_frame_2 - 0.045 14.0 0.2 0.079 13.2 0.2 1.4 1 0 0 1 1 1 0 Eukaryotic metallothionein ABC_membrane PF00664.23 NODE_53941_length_326_cov_1.202749_g46012_i0forward_frame_2 - 4.7e-07 29.7 3.1 5.6e-07 29.5 3.1 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region PTR2 PF00854.21 NODE_53941_length_326_cov_1.202749_g46012_i0forward_frame_2 - 6.7e-05 21.9 0.3 7.5e-05 21.7 0.3 1.1 1 0 0 1 1 1 1 POT family Sec20 PF03908.13 NODE_53941_length_326_cov_1.202749_g46012_i0forward_frame_2 - 0.019 14.8 0.7 0.041 13.8 0.7 1.4 1 0 0 1 1 1 0 Sec20 DUF2028 PF09667.10 NODE_53939_length_326_cov_1.463918_g46010_i0forward_frame_3 - 0.12 12.3 0.6 0.18 11.7 0.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF2028) PDR_CDR PF06422.12 NODE_53939_length_326_cov_1.463918_g46010_i0forward_frame_2 - 1.2 9.1 4.1 0.37 10.7 1.3 1.6 1 1 1 2 2 2 0 CDR ABC transporter DUF4337 PF14235.6 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_3 - 1.7 8.7 5.2 0.8 9.8 2.9 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) Shugoshin_N PF07558.11 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.0018 18.1 5.3 0.022 14.6 0.9 2.6 2 1 0 2 2 2 1 Shugoshin N-terminal coiled-coil region YabA PF06156.13 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.0068 17.0 1.8 0.011 16.4 1.6 1.4 1 1 0 1 1 1 1 Initiation control protein YabA TACC_C PF05010.14 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.037 13.8 5.7 1.5 8.5 0.2 2.1 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Speriolin_C PF15059.6 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.04 14.0 0.3 0.047 13.8 0.3 1.1 1 0 0 1 1 1 0 Speriolin C-terminus UPF0242 PF06785.11 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.066 13.3 3.7 0.072 13.2 3.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Val_tRNA-synt_C PF10458.9 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.12 12.7 4.5 0.78 10.1 1.2 2.9 2 1 1 3 3 3 0 Valyl tRNA synthetase tRNA binding arm TMF_DNA_bd PF12329.8 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.3 11.1 13.2 1.1 9.3 5.6 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Csm1_N PF18504.1 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.3 11.4 5.9 1.1 9.6 4.1 2.5 1 1 1 2 2 2 0 Csm1 N-terminal domain Syntaxin_2 PF14523.6 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.35 11.3 8.6 0.27 11.6 3.2 2.0 1 1 1 2 2 2 0 Syntaxin-like protein TMPIT PF07851.13 NODE_53938_length_326_cov_1.532646_g46009_i0forward_frame_2 - 0.86 8.8 4.4 0.94 8.7 4.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein CTD_bind PF04818.13 NODE_53937_length_326_cov_1.532646_g46008_i0forward_frame_2 - 0.082 13.7 0.5 0.13 13.2 0.5 1.3 1 0 0 1 1 1 0 RNA polymerase II-binding domain. Lip_prot_lig_C PF10437.9 NODE_53936_length_326_cov_1.556701_g46007_i0reverse_frame_3 - 0.019 15.0 0.1 0.028 14.4 0.1 1.2 1 0 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus Tap-RNA_bind PF09162.10 NODE_53936_length_326_cov_1.556701_g46007_i0reverse_frame_3 - 0.034 14.0 0.0 0.053 13.4 0.0 1.3 1 0 0 1 1 1 0 Tap, RNA-binding MatE PF01554.18 NODE_53935_length_326_cov_1.621993_g46006_i0forward_frame_3 - 2.6e-17 62.9 0.6 3e-17 62.7 0.6 1.0 1 0 0 1 1 1 1 MatE zf-HC5HC2H PF13771.6 NODE_53933_length_326_cov_1.738832_g46004_i0forward_frame_3 - 1.2e-06 28.6 2.7 1.2e-06 28.6 2.7 1.9 2 1 1 3 3 3 1 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 NODE_53933_length_326_cov_1.738832_g46004_i0forward_frame_3 - 0.00051 20.2 2.0 0.00051 20.2 2.0 1.6 2 1 0 2 2 2 1 PHD-zinc-finger like domain PHD_2 PF13831.6 NODE_53933_length_326_cov_1.738832_g46004_i0forward_frame_3 - 0.24 11.0 1.4 0.29 10.7 0.1 1.8 2 0 0 2 2 2 0 PHD-finger SBP_bac_3 PF00497.20 NODE_53932_length_326_cov_1.749141_g46003_i0reverse_frame_3 - 2.3e-23 82.8 0.1 2.5e-23 82.7 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 DUF5603 PF18231.1 NODE_53932_length_326_cov_1.749141_g46003_i0reverse_frame_3 - 0.025 14.9 0.1 2.4 8.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5603) DUF2788 PF10981.8 NODE_53931_length_326_cov_1.780069_g46002_i0forward_frame_2 - 1.9 8.5 6.9 0.92 9.6 1.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2788) SRP-alpha_N PF04086.13 NODE_53930_length_326_cov_1.828179_g46001_i0reverse_frame_2 - 6.2 6.7 12.6 7.2 6.4 12.6 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal LRR_9 PF14580.6 NODE_53928_length_326_cov_2.089347_g45999_i0reverse_frame_2 - 4.6e-07 29.5 0.0 5.6e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 NODE_53928_length_326_cov_2.089347_g45999_i0reverse_frame_2 - 0.011 16.2 0.9 0.24 11.9 0.1 2.7 2 1 1 3 3 3 0 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_53928_length_326_cov_2.089347_g45999_i0reverse_frame_2 - 0.054 13.3 1.1 2.8 7.8 0.0 2.8 2 1 0 3 3 3 0 Leucine rich repeat TRM PF02005.16 NODE_53928_length_326_cov_2.089347_g45999_i0forward_frame_3 - 0.23 10.6 1.3 0.24 10.5 1.3 1.0 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase Fijivirus_P9-2 PF06837.11 NODE_53926_length_326_cov_2.151203_g45997_i0forward_frame_2 - 0.82 9.1 8.3 0.93 8.9 8.3 1.2 1 0 0 1 1 1 0 Fijivirus P9-2 protein Neurexophilin PF06312.12 NODE_53924_length_326_cov_2.350515_g45995_i0forward_frame_3 - 0.058 12.8 0.2 0.071 12.6 0.2 1.1 1 0 0 1 1 1 0 Neurexophilin DUF1936 PF09151.10 NODE_53923_length_326_cov_2.432990_g45994_i0reverse_frame_3 - 0.13 12.2 0.3 0.19 11.7 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) tRNA-synt_2 PF00152.20 NODE_53921_length_326_cov_2.453608_g45992_i0forward_frame_3 - 2.8e-28 98.9 0.0 3.1e-28 98.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 NODE_53921_length_326_cov_2.453608_g45992_i0forward_frame_3 - 0.054 13.0 0.0 0.063 12.7 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) zf-rbx1 PF12678.7 NODE_53918_length_326_cov_2.508591_g45989_i0forward_frame_3 - 0.024 14.9 3.1 0.041 14.2 3.1 1.3 1 0 0 1 1 1 0 RING-H2 zinc finger domain T_hemolysin PF12261.8 NODE_53914_length_326_cov_2.573883_g45985_i0forward_frame_3 - 0.089 12.6 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Thermostable hemolysin Gal4_dimer PF03902.13 NODE_53914_length_326_cov_2.573883_g45985_i0forward_frame_2 - 0.1 12.7 0.2 3.7 7.8 0.0 2.2 1 1 1 2 2 2 0 Gal4-like dimerisation domain Metal_CEHH PF14455.6 NODE_53913_length_326_cov_2.604811_g45984_i0forward_frame_3 - 0.019 14.6 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 Predicted metal binding domain IGFL PF14653.6 NODE_53913_length_326_cov_2.604811_g45984_i0forward_frame_2 - 0.028 14.4 1.7 0.041 13.8 1.7 1.2 1 0 0 1 1 1 0 Insulin growth factor-like family Xpo1 PF08389.12 NODE_53911_length_326_cov_2.683849_g45982_i0reverse_frame_2 - 0.039 14.0 0.4 0.052 13.6 0.3 1.3 1 1 0 1 1 1 0 Exportin 1-like protein DUF5071 PF16804.5 NODE_53911_length_326_cov_2.683849_g45982_i0reverse_frame_2 - 0.041 14.1 0.0 0.048 13.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5071) Acetyltransf_5 PF13444.6 NODE_53911_length_326_cov_2.683849_g45982_i0reverse_frame_2 - 0.078 13.7 0.0 0.12 13.1 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Ciart PF15673.5 NODE_53910_length_326_cov_2.711340_g45981_i0forward_frame_2 - 0.051 13.0 0.1 0.051 13.0 0.1 1.1 1 0 0 1 1 1 0 Circadian-associated transcriptional repressor PRA1 PF03208.19 NODE_53908_length_326_cov_3.010309_g45979_i0forward_frame_2 - 0.4 10.3 12.3 0.51 10.0 12.3 1.2 1 0 0 1 1 1 0 PRA1 family protein Enolase_C PF00113.22 NODE_53907_length_326_cov_3.092784_g45978_i0reverse_frame_3 - 8.7e-10 38.3 0.1 1e-09 38.1 0.1 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks245.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks245.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks245.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks245.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RNA_pol_Rpb5_N PF03871.14 NODE_53900_length_326_cov_17.463918_g45971_i0reverse_frame_2 - 0.047 14.3 0.1 0.063 13.9 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb5, N-terminal domain Adeno_100 PF02438.16 NODE_53900_length_326_cov_17.463918_g45971_i0forward_frame_3 - 0.015 13.5 0.1 0.019 13.2 0.1 1.1 1 0 0 1 1 1 0 Late 100kD protein DUF4560 PF15118.6 NODE_53900_length_326_cov_17.463918_g45971_i0forward_frame_3 - 0.16 11.9 1.1 0.95 9.4 1.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4560) CW_binding_1 PF01473.20 NODE_53898_length_326_cov_41.178694_g45969_i0reverse_frame_2 - 0.034 14.5 2.7 0.082 13.3 2.7 1.7 1 0 0 1 1 1 0 Putative cell wall binding repeat SieB PF14163.6 NODE_53897_length_326_cov_54.367698_g45968_i0reverse_frame_2 - 0.016 14.7 1.0 0.02 14.4 1.0 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B COMMD1_N PF17221.3 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_3 - 0.005 17.1 1.8 0.0063 16.8 1.8 1.2 1 0 0 1 1 1 1 COMMD1 N-terminal domain AGH PF17558.2 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_3 - 0.26 11.5 6.0 0.074 13.2 3.0 1.6 1 1 1 2 2 2 0 Androgenic gland hormone SRP14 PF02290.15 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_3 - 0.45 10.9 3.7 0.3 11.5 1.9 1.6 1 1 1 2 2 2 0 Signal recognition particle 14kD protein CDC45 PF02724.14 NODE_53895_length_326_cov_58.347079_g45966_i0forward_frame_3 - 3.9 5.7 9.8 4.2 5.6 9.8 1.0 1 0 0 1 1 1 0 CDC45-like protein KinB_sensor PF16767.5 NODE_53893_length_326_cov_63.158076_g45964_i0reverse_frame_3 - 0.036 14.5 0.3 0.054 14.0 0.3 1.4 1 1 0 1 1 1 0 Sensor domain of alginate biosynthesis sensor protein KinB RNase_J_C PF17770.1 NODE_53893_length_326_cov_63.158076_g45964_i0reverse_frame_3 - 0.24 12.5 2.2 26 6.0 0.1 2.6 1 1 0 2 2 2 0 Ribonuclease J C-terminal domain BLUF PF04940.12 NODE_53891_length_326_cov_64.756014_g45962_i0reverse_frame_2 - 0.084 13.0 0.1 0.1 12.8 0.1 1.1 1 0 0 1 1 1 0 Sensors of blue-light using FAD ODAM PF15424.6 NODE_53890_length_326_cov_64.824742_g45961_i0reverse_frame_2 - 0.16 11.5 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Odontogenic ameloblast-associated family SCIMP PF15050.6 NODE_53890_length_326_cov_64.824742_g45961_i0forward_frame_2 - 0.57 10.6 0.1 0.57 10.6 0.1 1.9 2 0 0 2 2 2 0 SCIMP protein Poty_PP PF08440.10 NODE_53886_length_326_cov_68.195876_g45957_i0forward_frame_3 - 0.009 15.1 0.5 0.009 15.1 0.5 1.1 1 0 0 1 1 1 1 Potyviridae polyprotein FTA4 PF13093.6 NODE_53886_length_326_cov_68.195876_g45957_i0forward_frame_3 - 0.03 14.2 0.1 0.03 14.2 0.1 1.1 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 RRM_2 PF04059.12 NODE_53885_length_326_cov_72.213058_g45956_i0reverse_frame_2 - 0.078 13.2 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif 2 RCC1_2 PF13540.6 NODE_53878_length_326_cov_81.577320_g45949_i0reverse_frame_2 - 1.6e-07 30.9 2.7 0.098 12.5 0.0 3.2 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_53878_length_326_cov_81.577320_g45949_i0reverse_frame_2 - 0.13 12.3 0.0 11 6.0 0.0 2.5 3 0 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 TatC PF00902.18 NODE_53877_length_326_cov_84.243986_g45948_i0reverse_frame_3 - 0.17 11.7 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) Spore_coat_CotO PF14153.6 NODE_53874_length_326_cov_89.316151_g45945_i0forward_frame_3 - 0.019 14.9 0.2 0.021 14.8 0.2 1.2 1 1 0 1 1 1 0 Spore coat protein CotO Glyco_hydro_30 PF02055.16 NODE_53873_length_326_cov_91.718213_g45944_i0forward_frame_3 - 6.8e-12 45.0 0.0 8.4e-12 44.7 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 TIM-barrel domain Lamprin PF06403.11 NODE_53869_length_326_cov_94.824742_g45940_i0reverse_frame_3 - 0.0055 16.7 3.8 0.0067 16.4 3.8 1.1 1 0 0 1 1 1 1 Lamprin GCK PF07802.11 NODE_53868_length_326_cov_98.213058_g45939_i0reverse_frame_3 - 0.043 14.2 2.6 0.046 14.1 1.6 1.6 1 1 1 2 2 2 0 GCK domain YobH PF13996.6 NODE_53868_length_326_cov_98.213058_g45939_i0reverse_frame_2 - 0.17 12.0 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 YobH-like protein Med9 PF07544.13 NODE_53867_length_326_cov_98.759450_g45938_i0reverse_frame_2 - 0.095 12.8 0.5 0.12 12.4 0.5 1.2 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 VioE PF18234.1 NODE_53866_length_326_cov_99.058419_g45937_i0reverse_frame_3 - 0.16 12.1 0.1 0.2 11.8 0.1 1.1 1 0 0 1 1 1 0 Violacein biosynthetic enzyme VioE NACHT_N PF17100.5 NODE_53866_length_326_cov_99.058419_g45937_i0reverse_frame_2 - 0.32 10.8 5.9 0.4 10.5 5.9 1.0 1 0 0 1 1 1 0 N-terminal domain of NWD NACHT-NTPase Tmemb_9 PF05434.11 NODE_53866_length_326_cov_99.058419_g45937_i0forward_frame_2 - 0.21 11.4 0.3 0.25 11.2 0.3 1.1 1 0 0 1 1 1 0 TMEM9 WW_FCH_linker PF16623.5 NODE_53864_length_326_cov_106.223368_g45935_i0forward_frame_2 - 0.77 10.6 6.8 1.1 10.1 6.2 1.6 1 1 1 2 2 2 0 Unstructured linker region between on GAS7 protein Mem_trans PF03547.18 NODE_53864_length_326_cov_106.223368_g45935_i0forward_frame_2 - 7.1 4.9 5.1 7.7 4.8 5.1 1.0 1 0 0 1 1 1 0 Membrane transport protein Consortin_C PF15281.6 NODE_53861_length_326_cov_126.292096_g45932_i0reverse_frame_2 - 1.4 8.9 7.1 1.5 8.9 6.5 1.3 1 1 0 1 1 1 0 Consortin C-terminus DeoRC PF00455.22 NODE_53861_length_326_cov_126.292096_g45932_i0forward_frame_2 - 0.0082 16.1 0.0 0.014 15.4 0.0 1.4 1 1 0 1 1 1 1 DeoR C terminal sensor domain CMV_US PF08001.11 NODE_53853_length_326_cov_167.336770_g45924_i0reverse_frame_2 - 1.1 8.5 5.1 0.59 9.4 3.6 1.2 1 1 0 1 1 1 0 CMV US GST_C_3 PF14497.6 NODE_53853_length_326_cov_167.336770_g45924_i0forward_frame_2 - 0.0007 19.7 0.0 0.0011 19.2 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 NODE_53853_length_326_cov_167.336770_g45924_i0forward_frame_2 - 0.0037 17.4 0.0 0.0063 16.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain DUF4368 PF14287.6 NODE_53853_length_326_cov_167.336770_g45924_i0forward_frame_2 - 0.064 13.6 0.2 0.1 12.9 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4368) SLC3A2_N PF16028.5 NODE_53852_length_326_cov_176.192440_g45923_i0forward_frame_2 - 0.061 12.9 4.0 2.3 7.8 1.6 2.1 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus DUF3636 PF12331.8 NODE_53850_length_326_cov_273.305842_g45921_i0reverse_frame_2 - 0.17 11.7 1.1 0.36 10.6 0.1 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF3636) Fer4 PF00037.27 NODE_53849_length_326_cov_372.721649_g45920_i0reverse_frame_2 - 0.87 9.5 0.1 0.87 9.5 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain UPF0239 PF06783.11 NODE_53848_length_326_cov_379.288660_g45919_i0reverse_frame_2 - 0.085 13.0 2.0 0.13 12.5 2.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) MSL1_dimer PF16801.5 NODE_53848_length_326_cov_379.288660_g45919_i0forward_frame_2 - 0.028 14.2 0.2 0.05 13.4 0.2 1.4 1 0 0 1 1 1 0 Dimerisation domain of Male-specific-Lethal 1 YMF19 PF02326.15 NODE_53848_length_326_cov_379.288660_g45919_i0forward_frame_2 - 0.42 11.4 4.6 0.55 11.0 4.6 1.4 1 1 0 1 1 1 0 Plant ATP synthase F0 Inhibitor_I29 PF08246.12 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 4.5e-16 59.0 4.9 4.6e-16 59.0 4.2 1.4 1 1 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Romo1 PF10247.9 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 0.058 13.8 0.1 0.097 13.0 0.1 1.5 1 0 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 DUF3524 PF12038.8 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 0.073 12.9 0.2 0.1 12.4 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) Tmemb_9 PF05434.11 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 0.13 12.1 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 TMEM9 Varsurf_PPLC PF03490.13 NODE_53843_length_326_cov_5554.237113_g45914_i0reverse_frame_3 - 0.16 11.9 0.1 2.4 8.2 0.1 2.1 2 0 0 2 2 2 0 Variant-surface-glycoprotein phospholipase C Herpes_LMP1 PF05297.11 NODE_53843_length_326_cov_5554.237113_g45914_i0forward_frame_2 - 2 7.6 4.9 1.3 8.1 3.7 1.3 1 1 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) NPR1_interact PF15699.5 NODE_53842_length_326_cov_16233.879725_g45913_i0reverse_frame_2 - 0.021 15.4 0.2 0.03 15.0 0.2 1.2 1 0 0 1 1 1 0 NPR1 interacting ABC_tran PF00005.27 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 1.4e-12 48.3 0.2 3.3e-12 47.1 0.1 1.6 2 0 0 2 2 2 1 ABC transporter MMR_HSR1 PF01926.23 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.0015 18.6 0.1 0.0025 17.9 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.0055 16.4 0.0 0.0083 15.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.008 16.3 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_23 PF13476.6 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.033 14.7 0.2 0.052 14.0 0.1 1.3 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.076 12.9 0.0 0.082 12.8 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase MeaB PF03308.16 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.085 11.8 0.0 0.097 11.6 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.13 11.8 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.18 11.9 0.1 0.28 11.3 0.1 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain T2SSE PF00437.20 NODE_53840_length_327_cov_1.130137_g45911_i0reverse_frame_3 - 0.21 10.6 0.0 0.21 10.6 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein WSC PF01822.19 NODE_53837_length_327_cov_1.582192_g45908_i0reverse_frame_2 - 0.83 9.9 5.2 1.2 9.4 5.2 1.3 1 0 0 1 1 1 0 WSC domain DUF4734 PF15881.5 NODE_53836_length_327_cov_1.602740_g45907_i0reverse_frame_2 - 0.0092 16.1 0.5 0.02 15.0 0.5 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4734) DUF1516 PF07457.11 NODE_53836_length_327_cov_1.602740_g45907_i0forward_frame_3 - 0.00055 20.1 4.6 0.00069 19.8 4.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1516) DUF2700 PF10912.8 NODE_53836_length_327_cov_1.602740_g45907_i0forward_frame_3 - 0.031 14.3 3.3 0.034 14.2 3.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2700) AAA_18 PF13238.6 NODE_53836_length_327_cov_1.602740_g45907_i0forward_frame_2 - 0.034 14.7 0.1 0.038 14.5 0.1 1.1 1 0 0 1 1 1 0 AAA domain MazG_C PF18722.1 NODE_53832_length_327_cov_1.804795_g45903_i0forward_frame_2 - 0.25 10.9 0.3 0.32 10.5 0.3 1.1 1 0 0 1 1 1 0 MazG C-terminal domain CTU2 PF10288.9 NODE_53829_length_327_cov_1.839041_g45900_i0reverse_frame_2 - 0.0067 16.7 1.7 0.0087 16.3 1.7 1.1 1 0 0 1 1 1 1 Cytoplasmic tRNA 2-thiolation protein 2 YojJ PF10372.9 NODE_53829_length_327_cov_1.839041_g45900_i0reverse_frame_2 - 0.046 13.8 0.9 0.069 13.3 0.9 1.3 1 0 0 1 1 1 0 Bacterial membrane-spanning protein N-terminus Pyridoxal_deC PF00282.19 NODE_53827_length_327_cov_1.886986_g45898_i0reverse_frame_2 - 6.6e-19 67.9 0.0 7.3e-19 67.7 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 NODE_53827_length_327_cov_1.886986_g45898_i0reverse_frame_2 - 0.00042 19.7 0.0 0.00042 19.7 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 NODE_53827_length_327_cov_1.886986_g45898_i0reverse_frame_2 - 0.0071 15.3 0.0 0.008 15.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V MORN PF02493.20 NODE_53826_length_327_cov_1.897260_g45897_i0forward_frame_3 - 2.2e-13 49.3 15.8 2.4e-05 24.0 1.5 4.2 4 0 0 4 4 4 4 MORN repeat MORN_2 PF07661.13 NODE_53826_length_327_cov_1.897260_g45897_i0forward_frame_3 - 1.1 9.7 9.7 12 6.5 0.1 4.4 4 1 0 4 4 4 0 MORN repeat variant DUF2070 PF09843.9 NODE_53824_length_327_cov_1.969178_g45895_i0forward_frame_2 - 0.48 8.7 6.7 0.54 8.5 6.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) RMI2 PF16100.5 NODE_53823_length_327_cov_1.993151_g45894_i0forward_frame_3 - 0.12 12.2 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 NAD1 PF18778.1 NODE_53823_length_327_cov_1.993151_g45894_i0forward_frame_2 - 0.024 14.7 0.2 0.029 14.5 0.2 1.1 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 MSL1_dimer PF16801.5 NODE_53819_length_327_cov_2.099315_g45890_i0reverse_frame_2 - 8.7 6.2 9.3 11 5.8 1.9 2.3 1 1 1 2 2 2 0 Dimerisation domain of Male-specific-Lethal 1 DUF2207 PF09972.9 NODE_53816_length_327_cov_2.160959_g45887_i0forward_frame_2 - 6.7e-11 41.6 0.0 6.9e-11 41.6 0.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) GCD14_N PF14801.6 NODE_53816_length_327_cov_2.160959_g45887_i0forward_frame_2 - 0.15 11.9 0.4 0.35 10.8 0.1 1.8 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit N-term Poxvirus PF06227.12 NODE_53814_length_327_cov_2.184932_g45885_i0reverse_frame_2 - 0.13 12.0 0.7 0.18 11.5 0.7 1.2 1 0 0 1 1 1 0 dsDNA Poxvirus WcbI PF18588.1 NODE_53814_length_327_cov_2.184932_g45885_i0forward_frame_2 - 0.19 11.3 0.1 0.23 11.0 0.1 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis enzyme WcbI CCT_2 PF09425.10 NODE_53812_length_327_cov_2.256849_g45883_i0forward_frame_2 - 4.4 7.3 14.6 0.15 12.0 6.8 2.4 2 0 0 2 2 2 0 Divergent CCT motif GDE_C PF06202.14 NODE_53811_length_327_cov_2.445205_g45882_i0forward_frame_2 - 0.017 14.1 0.1 0.017 14.1 0.1 1.1 1 0 0 1 1 1 0 Amylo-alpha-1,6-glucosidase RdRP PF05183.12 NODE_53810_length_327_cov_2.465753_g45881_i0forward_frame_3 - 3.2e-14 52.5 0.1 3.3e-14 52.5 0.1 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase DUF3251 PF11622.8 NODE_53809_length_327_cov_2.527397_g45880_i0reverse_frame_3 - 0.00012 21.8 0.0 0.00012 21.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3251) Gp_dh_N PF00044.24 NODE_53808_length_327_cov_2.561644_g45879_i0reverse_frame_3 - 1.3e-18 67.2 0.0 1.6e-18 66.9 0.0 1.1 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 NODE_53808_length_327_cov_2.561644_g45879_i0reverse_frame_3 - 0.00028 20.3 0.0 0.00032 20.1 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 NODE_53808_length_327_cov_2.561644_g45879_i0reverse_frame_3 - 0.11 12.7 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 TrkA-N domain DUF2777 PF10949.8 NODE_53805_length_327_cov_2.626712_g45876_i0reverse_frame_3 - 0.048 13.3 1.0 0.058 13.1 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) CDC4_D PF16856.5 NODE_53805_length_327_cov_2.626712_g45876_i0reverse_frame_3 - 0.22 11.4 3.6 0.38 10.7 3.6 1.3 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain IBV_3A PF03617.13 NODE_53804_length_327_cov_2.640411_g45875_i0forward_frame_3 - 0.057 13.4 0.2 0.057 13.4 0.2 1.6 2 0 0 2 2 2 0 IBV 3A protein Biotin_lipoyl_2 PF13533.6 NODE_53802_length_327_cov_2.760274_g45873_i0reverse_frame_3 - 3.2e-06 26.9 0.0 6.9e-06 25.8 0.0 1.7 1 1 0 1 1 1 1 Biotin-lipoyl like DUF3570 PF12094.8 NODE_53802_length_327_cov_2.760274_g45873_i0reverse_frame_3 - 0.015 14.1 0.0 0.015 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3570) HlyD_D23 PF16576.5 NODE_53802_length_327_cov_2.760274_g45873_i0reverse_frame_3 - 0.07 12.3 0.1 0.082 12.1 0.1 1.2 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion RHS PF03527.14 NODE_53802_length_327_cov_2.760274_g45873_i0reverse_frame_2 - 0.25 11.1 0.8 0.31 10.8 0.1 1.6 2 0 0 2 2 2 0 RHS protein DUF4071 PF13281.6 NODE_53802_length_327_cov_2.760274_g45873_i0forward_frame_2 - 0.15 11.1 0.0 0.19 10.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4071) Nodulin PF02451.15 NODE_53801_length_327_cov_2.787671_g45872_i0reverse_frame_2 - 0.004 16.6 0.2 0.0049 16.4 0.2 1.1 1 0 0 1 1 1 1 Nodulin DUF1029 PF06269.12 NODE_53800_length_327_cov_2.859589_g45871_i0reverse_frame_2 - 0.11 12.6 0.2 0.17 12.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1029) EF-hand_13 PF17958.1 NODE_53800_length_327_cov_2.859589_g45871_i0forward_frame_3 - 0.039 13.8 0.0 0.059 13.2 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain Mucin PF01456.17 NODE_53799_length_327_cov_2.883562_g45870_i0reverse_frame_2 - 2 8.4 51.5 3.4 7.7 51.5 1.4 1 0 0 1 1 1 0 Mucin-like glycoprotein FSA_C PF10479.9 NODE_53799_length_327_cov_2.883562_g45870_i0reverse_frame_2 - 5.5 5.0 22.7 6.5 4.7 22.7 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF4228 PF14009.6 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 0.0041 17.5 0.0 0.0045 17.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4228) SSP160 PF06933.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 0.012 13.9 21.5 0.014 13.7 21.5 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Secretin_N_2 PF07655.13 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 0.12 12.9 13.2 0.16 12.5 13.2 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain Herpes_capsid PF06112.11 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 1.3 9.1 16.1 1.3 9.1 16.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein CCDC24 PF15669.5 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 1.4 8.8 6.3 1.6 8.6 6.3 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family CDK2AP PF09806.9 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 2.1 8.4 10.1 2.5 8.1 10.1 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein DUF515 PF04415.12 NODE_53799_length_327_cov_2.883562_g45870_i0forward_frame_3 - 5.7 5.2 19.4 6.8 5.0 19.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Dynactin_p62 PF05502.13 NODE_53797_length_327_cov_3.140411_g45868_i0forward_frame_3 - 0.13 11.0 4.3 0.16 10.7 4.3 1.0 1 0 0 1 1 1 0 Dynactin p62 family CTP_synth_N PF06418.14 NODE_53797_length_327_cov_3.140411_g45868_i0forward_frame_2 - 2.9e-16 59.6 0.2 3.5e-16 59.3 0.2 1.1 1 0 0 1 1 1 1 CTP synthase N-terminus CbiA PF01656.23 NODE_53797_length_327_cov_3.140411_g45868_i0forward_frame_2 - 0.019 15.0 0.1 0.028 14.5 0.1 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF2721 PF11026.8 NODE_53794_length_327_cov_3.448630_g45865_i0forward_frame_3 - 0.042 13.8 0.3 0.055 13.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) APH PF01636.23 NODE_53794_length_327_cov_3.448630_g45865_i0forward_frame_2 - 0.002 18.1 0.1 0.0026 17.7 0.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family NTP_transf_3 PF12804.7 NODE_53791_length_327_cov_3.839041_g45862_i0forward_frame_3 - 0.0052 17.2 0.0 0.0053 17.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 NODE_53791_length_327_cov_3.839041_g45862_i0forward_frame_3 - 0.011 15.4 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 0 Nucleotidyl transferase Collagen_bind_2 PF12904.7 NODE_53788_length_327_cov_4.390411_g45859_i0forward_frame_2 - 0.12 12.4 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Putative collagen-binding domain of a collagenase EF-hand_7 PF13499.6 NODE_53784_length_327_cov_10.537671_g45855_i0forward_frame_2 - 0.0036 17.7 0.0 0.0041 17.5 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair LCIB_C_CA PF18599.1 NODE_53781_length_327_cov_38.671233_g45852_i0forward_frame_2 - 0.25 10.6 1.3 0.32 10.3 1.3 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases DUF2649 PF10854.8 NODE_53780_length_327_cov_42.712329_g45851_i0forward_frame_2 - 0.027 14.8 1.7 0.027 14.8 1.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2649) Di19_C PF14571.6 NODE_53779_length_327_cov_43.308219_g45850_i0reverse_frame_3 - 0.052 14.1 5.7 0.058 13.9 4.6 1.6 1 1 1 2 2 2 0 Stress-induced protein Di19, C-terminal DUF3829 PF12889.7 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.00012 21.6 4.2 0.00015 21.4 4.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3829) Alpha-2-MRAP_C PF06401.11 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.0011 19.0 2.1 0.0014 18.6 2.1 1.1 1 0 0 1 1 1 1 Alpha-2-macroglobulin RAP, C-terminal domain NPV_P10 PF05531.12 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.0062 17.0 7.4 0.015 15.8 0.9 2.2 2 0 0 2 2 2 1 Nucleopolyhedrovirus P10 protein DUF3810 PF12725.7 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.008 15.6 0.8 0.0094 15.3 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3810) Val_tRNA-synt_C PF10458.9 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.038 14.3 3.4 0.047 14.0 3.4 1.2 1 0 0 1 1 1 0 Valyl tRNA synthetase tRNA binding arm Viral_P18 PF04521.13 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.059 13.2 0.5 0.1 12.4 0.3 1.4 1 1 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein Corazonin PF17308.2 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.12 12.7 1.4 0.15 12.4 1.4 1.1 1 0 0 1 1 1 0 Pro-corazonin Atg14 PF10186.9 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.17 10.9 6.2 0.2 10.7 6.2 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4795 PF16043.5 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.18 11.4 7.0 0.43 10.1 7.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) TRPM_tetra PF16519.5 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.19 11.9 5.6 5.3 7.2 0.7 2.6 2 1 0 2 2 2 0 Tetramerisation domain of TRPM Matrilin_ccoil PF10393.9 NODE_53778_length_327_cov_45.102740_g45849_i0reverse_frame_3 - 0.38 10.6 3.5 5.7 6.9 3.2 2.4 1 1 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin Phage_tail_APC PF16778.5 NODE_53777_length_327_cov_51.736301_g45848_i0reverse_frame_2 - 0.12 12.2 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein DUF3300 PF11737.8 NODE_53777_length_327_cov_51.736301_g45848_i0forward_frame_3 - 0.009 15.6 0.1 0.014 14.9 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3300) SK_channel PF03530.14 NODE_53776_length_327_cov_52.479452_g45847_i0forward_frame_2 - 0.01 15.8 0.3 0.013 15.5 0.3 1.2 1 0 0 1 1 1 0 Calcium-activated SK potassium channel LZ3wCH PF18517.1 NODE_53770_length_327_cov_62.534247_g45841_i0reverse_frame_3 - 0.021 14.9 1.1 0.021 14.9 1.1 1.7 2 0 0 2 2 2 0 Leucine zipper with capping helix domain YMF19 PF02326.15 NODE_53764_length_327_cov_68.280822_g45835_i0reverse_frame_2 - 0.12 13.2 0.2 0.15 12.9 0.2 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 zf-RING_11 PF17123.5 NODE_53760_length_327_cov_74.736301_g45831_i0reverse_frame_3 - 4.7 7.0 10.6 9.1 6.1 0.5 3.1 2 1 1 3 3 3 0 RING-like zinc finger Ofd1_CTDD PF10637.9 NODE_53759_length_327_cov_79.215753_g45830_i0reverse_frame_3 - 1.6e-13 50.6 0.0 2.1e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Oxoglutarate and iron-dependent oxygenase degradation C-term Myotoxins PF00819.17 NODE_53759_length_327_cov_79.215753_g45830_i0forward_frame_2 - 0.023 15.0 0.0 0.14 12.5 0.0 2.1 2 0 0 2 2 2 0 Myotoxin, crotamine DUF4714 PF15833.5 NODE_53755_length_327_cov_87.291096_g45826_i0reverse_frame_3 - 0.23 11.4 2.3 0.26 11.3 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) Stc1 PF12898.7 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_3 - 0.03 14.9 3.7 4.4 7.9 3.7 2.7 1 1 0 1 1 1 0 Stc1 domain GAPT PF11770.8 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_3 - 0.41 10.5 2.6 1.8 8.4 0.1 2.5 2 1 1 3 3 3 0 GRB2-binding adapter (GAPT) Tnp_zf-ribbon_2 PF13842.6 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_3 - 0.49 11.2 7.6 16 6.4 0.3 3.3 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon UBZ_FAAP20 PF15750.5 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_3 - 2.4 8.2 7.1 23 5.1 0.1 3.3 3 0 0 3 3 3 0 Ubiquitin-binding zinc-finger Fer4_12 PF13353.6 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_3 - 4.2 7.6 4.7 29 4.9 0.4 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain RCC1_2 PF13540.6 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_2 - 7.3e-06 25.6 0.9 0.11 12.4 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_2 - 0.013 14.1 0.2 1.8 7.0 0.0 2.8 2 1 0 3 3 3 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Catalase_C PF18011.1 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_2 - 0.066 12.9 1.3 4.2 7.0 0.2 2.1 1 1 1 2 2 2 0 C-terminal domain found in long catalases DUF155 PF02582.14 NODE_53753_length_327_cov_88.941781_g45824_i0reverse_frame_2 - 0.094 12.8 0.0 8.1 6.5 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Ocular_alb PF02101.15 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_3 - 0.13 11.1 0.0 7 5.5 0.0 2.0 1 1 1 2 2 2 0 Ocular albinism type 1 protein DUF3439 PF11921.8 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_3 - 0.21 11.6 0.2 0.21 11.6 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3439) RXT2_N PF08595.11 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_3 - 0.57 10.2 1.7 7.8 6.5 0.1 2.5 1 1 2 3 3 3 0 RXT2-like, N-terminal DnaT PF17948.1 NODE_53753_length_327_cov_88.941781_g45824_i0forward_frame_2 - 0.32 10.7 8.3 3.4 7.4 0.5 3.1 3 0 0 3 3 3 0 DnaT DNA-binding domain B-block_TFIIIC PF04182.12 NODE_53752_length_327_cov_96.592466_g45823_i0forward_frame_2 - 0.02 15.0 0.3 0.03 14.5 0.3 1.2 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Ribosomal_L41 PF05162.13 NODE_53751_length_327_cov_97.527397_g45822_i0reverse_frame_2 - 3.7e-06 26.9 25.3 3.7e-06 26.9 25.3 2.1 3 0 0 3 3 3 1 Ribosomal protein L41 HEAT_2 PF13646.6 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 1.1e-12 48.1 8.1 4.2e-12 46.3 8.1 1.7 1 1 0 1 1 1 1 HEAT repeats HEAT PF02985.22 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 1.1e-11 43.9 4.3 0.0013 18.8 0.1 3.4 3 0 0 3 3 3 3 HEAT repeat HEAT_EZ PF13513.6 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 2e-08 34.6 10.8 0.0008 19.9 2.0 3.2 1 1 2 3 3 3 3 HEAT-like repeat Cnd1 PF12717.7 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 6.8e-07 29.5 0.5 1.2e-05 25.4 0.1 2.2 1 1 1 2 2 2 1 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 1.1e-06 28.5 0.8 0.19 11.8 0.0 3.1 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.20 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 0.0015 17.2 0.1 0.052 12.1 0.0 1.4 1 1 1 2 2 2 2 Adaptin N terminal region Vac14_Fab1_bd PF12755.7 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 0.036 14.7 0.3 11 6.7 0.1 2.9 1 1 1 2 2 2 0 Vacuolar 14 Fab1-binding region V-ATPase_H_C PF11698.8 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 0.1 12.7 0.1 3.4 7.8 0.0 2.3 2 1 0 2 2 2 0 V-ATPase subunit H API5 PF05918.11 NODE_53748_length_327_cov_109.198630_g45819_i0forward_frame_3 - 0.12 11.1 0.7 6.9 5.4 0.0 2.0 1 1 1 2 2 2 0 Apoptosis inhibitory protein 5 (API5) DUF2673 PF10880.8 NODE_53747_length_327_cov_113.154110_g45818_i0forward_frame_3 - 0.14 12.3 1.0 0.19 11.9 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2673) FAM199X PF15814.5 NODE_53747_length_327_cov_113.154110_g45818_i0forward_frame_3 - 1.6 7.7 8.1 1.7 7.7 8.1 1.0 1 0 0 1 1 1 0 Protein family FAM199X rRNA_processing PF08524.11 NODE_53746_length_327_cov_113.592466_g45817_i0reverse_frame_3 - 0.0013 18.7 4.5 0.0013 18.7 4.5 2.0 1 1 1 2 2 2 1 rRNA processing DUF4477 PF14780.6 NODE_53746_length_327_cov_113.592466_g45817_i0reverse_frame_3 - 0.039 13.6 0.1 0.096 12.3 0.0 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4477) zf-Tim10_DDP PF02953.15 NODE_53745_length_327_cov_113.657534_g45816_i0forward_frame_2 - 0.0012 18.4 1.0 0.0079 15.8 1.0 2.0 1 1 0 1 1 1 1 Tim10/DDP family zinc finger PsaD PF02531.16 NODE_53744_length_327_cov_127.945205_g45815_i0reverse_frame_2 - 7.9e-05 22.2 0.0 0.00013 21.5 0.0 1.4 1 0 0 1 1 1 1 PsaD Shugoshin_C PF07557.11 NODE_53741_length_327_cov_188.630137_g45812_i0reverse_frame_3 - 0.025 14.4 0.2 0.052 13.3 0.2 1.5 1 0 0 1 1 1 0 Shugoshin C terminus Glyco_hydro_9 PF00759.19 NODE_53741_length_327_cov_188.630137_g45812_i0reverse_frame_3 - 0.074 12.5 0.0 0.078 12.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 9 Methyltransf_11 PF08241.12 NODE_53739_length_327_cov_210.421233_g45810_i0reverse_frame_3 - 1.1e-06 29.2 0.0 1.4e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_53739_length_327_cov_210.421233_g45810_i0reverse_frame_3 - 2.7e-06 28.0 0.0 3.7e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_53739_length_327_cov_210.421233_g45810_i0reverse_frame_3 - 0.063 13.1 0.0 0.063 13.1 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain HNH_3 PF13392.6 NODE_53739_length_327_cov_210.421233_g45810_i0forward_frame_2 - 0.01 15.6 0.3 0.021 14.6 0.3 1.5 1 0 0 1 1 1 0 HNH endonuclease RPN1_RPN2_N PF17781.1 NODE_53737_length_327_cov_215.267123_g45808_i0forward_frame_3 - 0.28 10.6 0.0 0.28 10.6 0.0 1.0 1 0 0 1 1 1 0 RPN1/RPN2 N-terminal domain Penaeidin PF05927.11 NODE_53737_length_327_cov_215.267123_g45808_i0forward_frame_3 - 1.8 9.4 10.8 18 6.2 10.8 2.0 1 1 0 1 1 1 0 Penaeidin DUF1797 PF08796.10 NODE_53736_length_327_cov_217.476027_g45807_i0forward_frame_3 - 0.21 11.7 0.1 0.35 11.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1797) Ribosomal_60s PF00428.19 NODE_53734_length_327_cov_245.157534_g45805_i0reverse_frame_2 - 2.3e-16 60.2 7.9 2.7e-16 59.9 7.9 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein BRK PF07533.16 NODE_53734_length_327_cov_245.157534_g45805_i0reverse_frame_2 - 0.0011 18.5 0.0 0.002 17.7 0.0 1.4 1 0 0 1 1 1 1 BRK domain WBP-1 PF11669.8 NODE_53734_length_327_cov_245.157534_g45805_i0forward_frame_3 - 0.06 14.0 0.0 0.073 13.7 0.0 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 CCD PF07860.11 NODE_53734_length_327_cov_245.157534_g45805_i0forward_frame_3 - 0.21 11.6 0.0 0.26 11.3 0.0 1.1 1 0 0 1 1 1 0 WisP family C-Terminal Region CFEM PF05730.11 NODE_53730_length_327_cov_323.811644_g45340_i1reverse_frame_2 - 1.3 9.2 8.7 0.24 11.5 4.2 1.9 2 0 0 2 2 2 0 CFEM domain PABP PF00658.18 NODE_53729_length_327_cov_388.030822_g45801_i0forward_frame_2 - 1.1e-17 64.0 0.8 1.5e-17 63.6 0.8 1.2 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain Sperm_Ag_HE2 PF05324.13 NODE_53728_length_327_cov_425.534247_g45800_i0reverse_frame_3 - 0.11 13.0 0.5 2.8 8.5 0.0 2.1 2 0 0 2 2 2 0 Sperm antigen HE2 Sperm_Ag_HE2 PF05324.13 NODE_53727_length_327_cov_425.791096_g45799_i0reverse_frame_3 - 0.063 13.7 0.2 2.8 8.5 0.0 2.1 2 0 0 2 2 2 0 Sperm antigen HE2 CAP-ZIP_m PF15255.6 NODE_53727_length_327_cov_425.791096_g45799_i0reverse_frame_2 - 0.0087 16.3 0.9 0.0096 16.2 0.9 1.0 1 0 0 1 1 1 1 WASH complex subunit CAP-Z interacting, central region PSI_PsaJ PF01701.18 NODE_53726_length_327_cov_1040.599315_g45798_i0reverse_frame_3 - 0.0014 19.1 0.1 0.0027 18.2 0.1 1.5 1 0 0 1 1 1 1 Photosystem I reaction centre subunit IX / PsaJ Popeye PF04831.13 NODE_53724_length_327_cov_4089.599315_g45796_i0reverse_frame_3 - 2.8 8.1 8.4 3.4 7.8 8.4 1.2 1 0 0 1 1 1 0 Popeye protein conserved region Ferrochelatase PF00762.19 ORF99949 - 0.04 13.0 0.1 0.042 12.9 0.1 1.2 1 1 0 1 1 1 0 Ferrochelatase TFIIS_C PF01096.18 ORF99338 - 4.6e-20 71.2 1.4 4.6e-20 71.2 1.4 2.7 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 ORF99338 - 2e-05 24.4 0.5 2e-05 24.4 0.5 2.6 2 0 0 2 2 2 1 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.7 ORF99338 - 0.0028 17.6 6.6 0.055 13.5 1.0 2.4 2 1 0 2 2 2 2 Transposase zinc-ribbon domain Baculo_LEF5_C PF11792.8 ORF99338 - 0.0061 16.2 1.8 0.0083 15.8 0.2 2.2 2 1 0 2 2 2 1 Baculoviridae late expression factor 5 C-terminal domain Mu-like_Com PF10122.9 ORF99338 - 0.0075 15.7 1.7 1.1 8.7 0.1 2.5 2 0 0 2 2 2 1 Mu-like prophage protein Com DpnI PF06044.12 ORF99338 - 0.045 13.4 0.3 0.045 13.4 0.3 1.7 1 1 0 2 2 2 0 Dam-replacing family YacG PF03884.14 ORF99338 - 0.079 12.7 3.1 2.4 8.0 0.7 2.5 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG Hjc PF01870.18 ORF99338 - 0.079 13.0 0.0 0.097 12.7 0.0 1.2 1 0 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) zf-ribbon_3 PF13248.6 ORF99338 - 0.081 12.4 11.0 0.3 10.6 0.0 3.4 4 0 0 4 4 4 0 zinc-ribbon domain Cys_rich_KTR PF14205.6 ORF99338 - 0.11 12.3 9.3 4.6 7.1 0.1 2.9 2 1 0 2 2 2 0 Cysteine-rich KTR Auto_anti-p27 PF06677.12 ORF99338 - 0.12 12.6 0.8 0.12 12.6 0.8 2.2 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Serine_protease PF18405.1 ORF99338 - 0.13 11.4 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 Gammaproteobacterial serine protease zf-TFIIB PF13453.6 ORF99338 - 0.16 11.3 2.5 3.6 7.0 0.0 2.6 2 1 0 2 2 2 0 Transcription factor zinc-finger zinc-ribbons_6 PF07191.12 ORF99338 - 0.21 11.6 0.2 0.21 11.6 0.2 2.4 2 1 0 2 2 2 0 zinc-ribbons zinc_ribbon_13 PF09855.9 ORF99338 - 0.22 11.7 4.3 4.7 7.4 0.1 2.9 2 1 1 3 3 3 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) DZR PF12773.7 ORF99338 - 0.22 11.5 8.0 0.84 9.7 5.0 2.6 2 1 0 2 2 2 0 Double zinc ribbon zf-FPG_IleRS PF06827.14 ORF99338 - 0.31 10.9 0.3 0.31 10.9 0.3 2.5 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Rpr2 PF04032.16 ORF99338 - 0.31 11.3 2.7 5.7 7.3 0.2 2.3 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-ACC PF17848.1 ORF99338 - 0.55 10.3 6.9 15 5.8 2.5 2.9 2 1 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Nudix_N_2 PF14803.6 ORF99338 - 0.65 10.0 9.2 0.32 11.0 2.3 3.4 3 1 0 3 3 3 0 Nudix N-terminal zf-NADH-PPase PF09297.11 ORF99338 - 0.92 9.2 5.8 1.5 8.5 0.0 3.1 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Zn_Tnp_IS1 PF03811.13 ORF99338 - 1.2 8.9 5.4 1.6 8.5 0.0 3.0 3 0 0 3 3 3 0 InsA N-terminal domain TF_Zn_Ribbon PF08271.12 ORF99338 - 1.3 8.6 10.5 0.95 9.0 0.4 2.9 2 2 0 2 2 2 0 TFIIB zinc-binding Rubredoxin PF00301.20 ORF99338 - 3.7 7.6 10.9 12 6.0 0.1 3.5 4 0 0 4 4 4 0 Rubredoxin zinc_ribbon_4 PF13717.6 ORF99338 - 4.4 7.3 9.7 13 5.8 0.5 3.9 4 0 0 4 4 4 0 zinc-ribbon domain CpXC PF14353.6 ORF99338 - 9.6 6.3 8.6 17 5.4 3.6 2.7 1 1 1 2 2 2 0 CpXC protein Deltameth_res PF16020.5 ORF9917 - 0.0073 16.2 0.1 0.014 15.2 0.1 1.5 1 0 0 1 1 1 1 Deltamethrin resistance HpaB PF03241.13 ORF9917 - 0.024 13.7 0.0 0.033 13.3 0.0 1.1 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase C terminal DUF1482 PF07358.11 ORF98828 - 0.061 13.2 0.1 0.16 11.9 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1482) TerB_N PF13208.6 ORF98828 - 0.19 11.4 0.0 0.26 11.0 0.0 1.1 1 0 0 1 1 1 0 TerB N-terminal domain DUF2623 PF11115.8 ORF98660 - 6e-49 164.1 2.2 6.9e-49 163.9 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2623) ANTAR PF03861.14 ORF94857 - 0.036 13.9 0.0 0.087 12.7 0.0 1.6 1 1 0 1 1 1 0 ANTAR domain XPC-binding PF09280.11 ORF94647 - 0.022 14.5 1.5 0.045 13.5 1.5 1.4 1 0 0 1 1 1 0 XPC-binding domain Enkurin PF13864.6 ORF94647 - 0.023 15.1 1.6 0.042 14.3 1.6 1.6 1 1 0 1 1 1 0 Calmodulin-binding Anti-TRAP PF15777.5 ORF93909 - 0.079 12.9 0.3 0.22 11.5 0.3 1.7 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF2517 PF10725.9 ORF91217 - 0.033 14.0 0.1 0.067 13.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2517) Sulfotransfer_2 PF03567.14 ORF91217 - 0.096 12.6 0.5 0.11 12.4 0.5 1.3 1 1 0 1 1 1 0 Sulfotransferase family Peptidase_S15 PF02129.18 ORF91217 - 0.11 12.0 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Headcase PF16002.5 ORF91032 - 0.019 14.4 0.8 0.023 14.1 0.8 1.1 1 0 0 1 1 1 0 Headcase protein eIF-1a PF01176.19 ORF90736 - 2.3e-27 94.6 0.0 3.3e-27 94.1 0.0 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RsgA_N PF16745.5 ORF90736 - 4.9e-05 23.0 0.1 0.00011 21.8 0.0 1.8 1 1 1 2 2 2 1 RsgA N-terminal domain RNase_II_C_S1 PF18614.1 ORF90736 - 0.047 13.6 0.0 0.09 12.7 0.0 1.7 1 1 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain S1 PF00575.23 ORF90736 - 0.085 13.2 0.1 0.12 12.7 0.1 1.3 1 0 0 1 1 1 0 S1 RNA binding domain Apo-CIII PF05778.12 ORF90550 - 0.075 12.7 0.4 0.15 11.8 0.4 1.5 1 0 0 1 1 1 0 Apolipoprotein CIII (Apo-CIII) Metallothio_2 PF01439.18 ORF90243 - 0.0098 16.8 0.0 0.014 16.3 0.0 1.3 1 0 0 1 1 1 1 Metallothionein SPK PF04435.18 ORF88494 - 0.024 15.1 0.5 0.024 15.1 0.5 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF545) NICE-1 PF15845.5 ORF88440 - 0.034 14.9 0.8 0.048 14.4 0.8 1.5 1 1 0 1 1 1 0 Cysteine-rich C-terminal 1 family ABC-3 PF00950.17 ORF88280 - 0.071 12.6 0.1 0.085 12.3 0.1 1.1 1 0 0 1 1 1 0 ABC 3 transport family MAAL_C PF07476.11 ORF87969 - 0.036 13.2 0.1 0.073 12.2 0.1 1.5 1 1 1 2 2 2 0 Methylaspartate ammonia-lyase C-terminus HTH_Tnp_IS1 PF12759.7 ORF87408 - 5.2e-31 106.0 0.5 7.8e-31 105.4 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 ORF87408 - 1.6e-20 72.5 6.5 3.6e-20 71.4 6.5 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF87408 - 0.0082 16.0 2.8 0.018 14.9 2.8 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 ORF87408 - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 ORF87408 - 0.028 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Dof PF02701.15 ORF87408 - 0.087 13.0 4.1 0.21 11.7 3.9 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger FdhE PF04216.12 ORF87408 - 0.14 12.1 7.2 0.19 11.6 7.2 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 ORF87408 - 3.2 7.8 6.2 5.5 7.1 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF2284 PF10050.9 ORF86840 - 7 6.4 12.9 1.3 8.7 3.9 2.0 1 1 1 2 2 2 0 Predicted metal-binding protein (DUF2284) SMP_LBD PF17047.5 ORF86773 - 0.058 12.9 0.2 0.064 12.7 0.2 1.1 1 0 0 1 1 1 0 Synaptotagmin-like mitochondrial-lipid-binding domain DUF3482 PF11981.8 ORF86567 - 0.028 13.8 0.1 0.032 13.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) PSCyt3 PF07627.11 ORF85595 - 0.16 12.2 0.1 0.38 11.1 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1588) CReP_N PF10472.9 ORF85595 - 1.2 7.9 5.2 1.4 7.7 5.2 1.0 1 0 0 1 1 1 0 eIF2-alpha phosphatase phosphorylation constitutive repressor HMMR_N PF15905.5 ORF85197 - 1e-05 25.2 8.6 1.1e-05 25.1 8.6 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal ApoO PF09769.9 ORF85197 - 0.018 15.0 0.3 0.031 14.2 0.2 1.5 1 1 0 1 1 1 0 Apolipoprotein O Plant_NMP1 PF06694.11 ORF85197 - 0.024 13.7 0.6 0.028 13.5 0.6 1.2 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) CorA PF01544.18 ORF85197 - 0.033 13.5 3.2 0.037 13.3 3.2 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein YabA PF06156.13 ORF85197 - 0.037 14.7 1.5 0.037 14.7 1.5 2.0 1 1 1 2 2 2 0 Initiation control protein YabA MLD PF11647.8 ORF85197 - 0.048 13.9 0.2 0.13 12.5 0.2 1.9 1 1 0 1 1 1 0 Membrane Localization Domain DUF2408 PF10303.9 ORF85197 - 0.057 14.0 3.5 0.082 13.5 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2408) DUF489 PF04356.12 ORF85197 - 0.086 12.8 1.3 0.16 11.9 0.9 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF489) Fungal_trans_2 PF11951.8 ORF85197 - 0.18 10.6 1.2 0.2 10.4 1.2 1.1 1 0 0 1 1 1 0 Fungal specific transcription factor domain DUF948 PF06103.11 ORF85197 - 0.25 11.6 1.2 16 5.9 0.1 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1690 PF07956.11 ORF85197 - 1 9.7 9.9 2.1 8.8 1.4 2.6 1 1 1 2 2 2 0 Protein of Unknown function (DUF1690) LMBR1 PF04791.16 ORF85197 - 1.7 7.4 7.6 2 7.3 7.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Noelin-1 PF12308.8 ORF85000 - 0.056 13.4 0.1 0.077 13.0 0.1 1.2 1 0 0 1 1 1 0 Neurogenesis glycoprotein Arrestin_C PF02752.22 ORF84820 - 0.12 12.8 0.3 2.1 8.8 0.3 2.0 1 1 0 1 1 1 0 Arrestin (or S-antigen), C-terminal domain Cyclin_N2 PF16500.5 ORF84373 - 0.038 14.7 1.3 0.048 14.4 1.3 1.1 1 0 0 1 1 1 0 N-terminal region of cyclin_N AP2 PF00847.20 ORF80192 - 3.5e-07 30.4 0.3 5e-07 29.9 0.3 1.2 1 0 0 1 1 1 1 AP2 domain RAMP PF04901.13 ORF80071 - 0.87 9.6 5.1 0.15 12.1 1.1 1.8 2 0 0 2 2 2 0 Receptor activity modifying family SWIM PF04434.17 ORF79990 - 0.12 12.1 3.1 0.27 11.0 3.1 1.5 1 1 0 1 1 1 0 SWIM zinc finger HTH_Tnp_IS1 PF12759.7 ORF79811 - 5.2e-31 106.0 0.5 7.8e-31 105.4 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 ORF79811 - 1.6e-20 72.5 6.5 3.6e-20 71.4 6.5 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF79811 - 0.0082 16.0 2.8 0.018 14.9 2.8 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 ORF79811 - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 ORF79811 - 0.028 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Dof PF02701.15 ORF79811 - 0.087 13.0 4.1 0.21 11.7 3.9 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger FdhE PF04216.12 ORF79811 - 0.14 12.1 7.2 0.19 11.6 7.2 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 ORF79811 - 3.2 7.8 6.2 5.5 7.1 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FGFR3_TM PF18123.1 ORF79259 - 2.9 7.5 11.8 3.9 7.1 3.0 2.8 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Ribosomal_S26e PF01283.19 ORF79259 - 4.4 7.8 6.0 6.3 7.3 0.4 2.1 1 1 1 2 2 2 0 Ribosomal protein S26e DUF5447 PF17525.2 ORF79170 - 0.46 11.0 7.6 0.11 13.0 4.0 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5447) UPF0060 PF02694.15 ORF78889 - 5.6e-49 164.8 11.8 6.1e-49 164.7 11.8 1.0 1 0 0 1 1 1 1 Uncharacterised BCR, YnfA/UPF0060 family Alpha_TIF PF02232.15 ORF78837 - 0.065 12.3 0.0 0.075 12.1 0.0 1.1 1 0 0 1 1 1 0 Alpha trans-inducing protein (Alpha-TIF) DUF667 PF05018.13 ORF76356 - 3e-44 151.0 0.6 3.3e-44 150.8 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) Bac_export_2 PF01312.19 ORF7561 - 0.18 11.0 2.2 0.2 10.8 2.2 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family Alpha-amyl_C2 PF07821.12 ORF74032 - 0.0058 16.8 0.0 0.022 15.0 0.0 1.9 1 1 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain DUF748 PF05359.11 ORF74032 - 0.11 12.7 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF748) MORN PF02493.20 ORF7259 - 4e-22 76.7 22.0 1.6e-08 33.9 1.4 5.2 5 0 0 5 5 5 5 MORN repeat KLRAQ PF10205.9 ORF72502 - 0.015 15.5 0.8 0.024 14.9 0.6 1.5 1 1 0 1 1 1 0 Predicted coiled-coil domain-containing protein bZIP_2 PF07716.15 ORF72502 - 0.072 13.2 1.5 0.17 12.0 1.5 1.6 1 0 0 1 1 1 0 Basic region leucine zipper Meth_synt_2 PF01717.18 ORF71907 - 0.068 12.4 0.0 0.085 12.1 0.0 1.2 1 0 0 1 1 1 0 Cobalamin-independent synthase, Catalytic domain Exonuc_VII_L PF02601.15 ORF7109 - 0.0011 18.6 4.5 0.0013 18.4 4.5 1.0 1 0 0 1 1 1 1 Exonuclease VII, large subunit Zw10 PF06248.13 ORF7109 - 0.0011 17.6 3.8 0.0013 17.4 3.8 1.0 1 0 0 1 1 1 1 Centromere/kinetochore Zw10 APG17 PF04108.12 ORF7109 - 0.0021 17.2 2.6 0.0024 17.0 2.6 1.0 1 0 0 1 1 1 1 Autophagy protein Apg17 Tweety PF04906.13 ORF7109 - 0.0046 15.7 1.4 0.0057 15.4 1.4 1.0 1 0 0 1 1 1 1 Tweety ERp29 PF07749.12 ORF7109 - 0.006 17.5 1.9 0.008 17.1 1.9 1.1 1 0 0 1 1 1 1 Endoplasmic reticulum protein ERp29, C-terminal domain DUF4495 PF14906.6 ORF7109 - 0.017 14.2 0.3 0.018 14.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4495) DUF2205 PF10224.9 ORF7109 - 0.018 15.0 3.3 0.021 14.8 1.4 2.0 1 1 1 2 2 2 0 Short coiled-coil protein RRF PF01765.19 ORF7109 - 0.024 14.6 5.7 0.031 14.2 5.7 1.3 1 0 0 1 1 1 0 Ribosome recycling factor DASH_Duo1 PF08651.10 ORF7109 - 0.055 13.2 0.6 0.055 13.2 0.6 2.2 2 1 1 3 3 3 0 DASH complex subunit Duo1 Ribosomal_L12_N PF16320.5 ORF7109 - 0.077 12.7 0.3 0.2 11.4 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain DUF883 PF05957.13 ORF7109 - 0.11 13.1 0.5 4.4 8.0 0.1 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) MRP-S32 PF10210.9 ORF7109 - 0.2 12.2 4.4 0.6 10.7 4.4 1.8 1 1 0 1 1 1 0 Mitochondrial 28S ribosomal protein S32 HIP1_clath_bdg PF16515.5 ORF7109 - 0.22 12.2 6.0 0.42 11.2 4.2 1.8 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TMPIT PF07851.13 ORF7109 - 0.29 10.3 8.4 0.32 10.2 8.4 1.1 1 0 0 1 1 1 0 TMPIT-like protein YtxH PF12732.7 ORF7109 - 0.29 11.7 3.9 4.3 7.9 3.9 2.1 1 1 0 1 1 1 0 YtxH-like protein LMBR1 PF04791.16 ORF7109 - 0.65 8.8 6.0 0.74 8.7 6.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein PP2C_C PF07830.13 ORF7109 - 1.9 9.0 4.8 3.4 8.2 0.8 2.1 1 1 1 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain ALMT PF11744.8 ORF7109 - 4.7 5.9 6.6 5.7 5.7 6.6 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter Pkinase PF00069.25 ORF70399 - 1.8e-22 80.0 0.1 2.1e-22 79.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70399 - 8.7e-15 54.7 0.0 1e-14 54.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF70399 - 0.00015 21.2 0.0 0.00016 21.1 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF70399 - 0.00035 20.6 0.0 0.0004 20.4 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF70399 - 0.0022 17.0 0.0 0.0024 16.9 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF70399 - 0.04 13.5 0.0 0.068 12.8 0.0 1.4 1 1 0 1 1 1 0 RIO1 family Kinase-like PF14531.6 ORF70399 - 0.084 12.2 0.0 0.086 12.1 0.0 1.1 1 0 0 1 1 1 0 Kinase-like DUF3237 PF11578.8 ORF70399 - 0.18 11.7 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) zf-LITAF-like PF10601.9 ORF70223 - 4.4e-12 46.1 1.8 6e-12 45.7 1.8 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain NTR PF01759.21 ORF69027 - 0.049 13.5 1.0 0.099 12.5 1.0 1.6 1 1 0 1 1 1 0 UNC-6/NTR/C345C module DUF2207 PF09972.9 ORF68845 - 0.072 11.8 1.1 0.083 11.6 1.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5571 PF17732.1 ORF68845 - 0.096 12.1 4.5 0.12 11.8 4.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5571) Urb2 PF10441.9 ORF68396 - 0.15 12.0 0.1 0.17 11.8 0.1 1.1 1 0 0 1 1 1 0 Urb2/Npa2 family Zn_Tnp_IS91 PF14319.6 ORF66658 - 0.13 12.3 0.7 0.13 12.3 0.7 2.2 2 0 0 2 2 2 0 Transposase zinc-binding domain DSPc PF00782.20 ORF65838 - 4.2e-13 49.2 0.1 5.1e-13 49.0 0.1 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF65838 - 0.00018 21.2 0.1 0.00019 21.1 0.1 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Invas_SpaK PF03519.14 ORF65221 - 0.044 13.9 0.0 0.067 13.3 0.0 1.4 1 0 0 1 1 1 0 Invasion protein B family DUF2043 PF09740.9 ORF64241 - 0.54 11.0 5.5 1.2 9.8 0.4 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2043) Ribosomal_L35Ae PF01247.18 ORF63483 - 5.4e-31 106.6 0.1 6.2e-31 106.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 ORF63483 - 0.0012 19.0 0.1 0.98 9.7 0.0 2.1 2 0 0 2 2 2 2 RimM N-terminal domain DUF2080 PF09853.9 ORF63483 - 0.0077 16.0 0.6 0.37 10.6 0.1 2.4 1 1 1 2 2 2 2 Putative transposon-encoded protein (DUF2080) TMIE PF16038.5 ORF62822 - 0.031 14.1 0.7 0.049 13.5 0.7 1.4 1 0 0 1 1 1 0 TMIE protein LSR PF05624.14 ORF62822 - 2.7 8.1 9.8 0.63 10.1 4.4 2.2 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) DNA_RNApol_7kD PF03604.13 ORF62585 - 2.9 7.7 6.8 4.9 6.9 1.8 2.5 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit SR-25 PF10500.9 ORF62496 - 0.54 9.8 11.6 0.64 9.6 11.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF727 PF05303.12 ORF62282 - 4.5e-07 29.9 1.9 1.3e-06 28.4 1.9 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF727) GHL5 PF14872.6 ORF62282 - 0.038 12.0 0.4 0.041 11.9 0.4 1.0 1 0 0 1 1 1 0 Hypothetical glycoside hydrolase 5 DUF1732 PF08340.11 ORF61690 - 0.0011 19.0 0.3 0.0015 18.5 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1732) PTS_IIB PF02302.17 ORF59821 - 2e-17 63.7 1.2 2.3e-17 63.4 1.2 1.1 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit Methyltransf_30 PF05430.11 ORF59821 - 0.13 12.1 0.1 0.28 11.1 0.0 1.5 1 1 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase Ferrochelatase PF00762.19 ORF58830 - 0.04 13.0 0.1 0.042 12.9 0.1 1.2 1 1 0 1 1 1 0 Ferrochelatase Ras PF00071.22 ORF58416 - 3.9e-17 62.3 0.2 5.8e-17 61.8 0.2 1.3 1 0 0 1 1 1 1 Ras family zf-LITAF-like PF10601.9 ORF58068 - 0.034 14.4 1.0 0.053 13.8 1.0 1.3 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Gemini_mov PF01708.16 ORF57937 - 0.0066 16.2 0.5 0.01 15.6 0.5 1.3 1 0 0 1 1 1 1 Geminivirus putative movement protein HemY_N PF07219.13 ORF57937 - 0.094 12.9 1.5 0.13 12.5 1.5 1.2 1 0 0 1 1 1 0 HemY protein N-terminus Albumin_I PF08027.11 ORF5746 - 0.22 11.2 6.9 3.6 7.3 0.6 3.2 3 0 0 3 3 3 0 Albumin I chain b Mpv17_PMP22 PF04117.12 ORF57272 - 2.3e-18 66.1 0.9 2.3e-18 66.1 0.9 1.6 2 0 0 2 2 2 1 Mpv17 / PMP22 family YukC PF10140.9 ORF57239 - 0.038 12.8 0.2 0.038 12.8 0.2 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Mtd_N PF18454.1 ORF56747 - 0.012 15.7 0.1 0.021 14.9 0.1 1.4 1 0 0 1 1 1 0 Major tropism determinant N-terminal domain EssA PF10661.9 ORF5621 - 0.045 13.6 6.8 0.052 13.4 6.8 1.0 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA Ribosomal_L35Ae PF01247.18 ORF55887 - 5.4e-31 106.6 0.1 6.2e-31 106.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 ORF55887 - 0.0012 19.0 0.1 0.98 9.7 0.0 2.1 2 0 0 2 2 2 2 RimM N-terminal domain DUF2080 PF09853.9 ORF55887 - 0.0077 16.0 0.6 0.37 10.6 0.1 2.4 1 1 1 2 2 2 2 Putative transposon-encoded protein (DUF2080) CLP1_N PF16573.5 ORF55472 - 0.065 13.5 0.0 0.087 13.1 0.0 1.2 1 0 0 1 1 1 0 N-terminal beta-sandwich domain of polyadenylation factor HTH_Tnp_IS1 PF12759.7 ORF5517 - 5.2e-31 106.0 0.5 7.8e-31 105.4 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 ORF5517 - 1.6e-20 72.5 6.5 3.6e-20 71.4 6.5 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF5517 - 0.0082 16.0 2.8 0.018 14.9 2.8 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 ORF5517 - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 ORF5517 - 0.028 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Dof PF02701.15 ORF5517 - 0.087 13.0 4.1 0.21 11.7 3.9 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger FdhE PF04216.12 ORF5517 - 0.14 12.1 7.2 0.19 11.6 7.2 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 ORF5517 - 3.2 7.8 6.2 5.5 7.1 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF630 PF04783.12 ORF54832 - 0.24 11.6 2.7 0.43 10.8 0.2 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF630) DUF3085 PF11284.8 ORF53903 - 0.0012 19.1 0.0 0.0017 18.6 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3085) LSM PF01423.22 ORF53704 - 1.9e-18 65.9 1.8 2.3e-18 65.6 1.8 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 ORF53704 - 0.012 15.8 0.6 0.016 15.4 0.6 1.2 1 0 0 1 1 1 0 Ataxin 2 SM domain Tail_tube PF10618.9 ORF53704 - 0.014 15.3 0.3 0.023 14.6 0.3 1.3 1 0 0 1 1 1 0 Phage tail tube protein BPL_C PF02237.17 ORF53704 - 0.13 12.2 1.5 0.19 11.6 0.9 1.6 2 0 0 2 2 2 0 Biotin protein ligase C terminal domain Fibrillin_U_N PF18193.1 ORF53663 - 3.1 8.0 6.1 0.46 10.6 1.6 2.1 2 1 0 2 2 2 0 Fibrillin 1 unique N-terminal domain ADH_zinc_N_2 PF13602.6 ORF52284 - 0.098 13.7 0.0 0.099 13.7 0.0 1.3 1 1 0 1 1 1 0 Zinc-binding dehydrogenase Phage_holin_3_5 PF16085.5 ORF50126 - 0.019 15.1 2.6 0.025 14.7 2.3 1.4 1 1 0 1 1 1 0 Bacteriophage holin Hol, superfamily III RNA_pol_Rpb1_4 PF05000.17 ORF49064 - 1.7 8.6 8.4 2 8.4 8.0 1.3 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 4 Hid1 PF12722.7 ORF49064 - 7 4.6 11.5 7.6 4.5 11.5 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Nepo_coat PF03391.15 ORF49001 - 0.08 12.4 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Nepovirus coat protein, central domain UL97 PF06734.12 ORF47230 - 0.043 13.7 0.2 0.054 13.4 0.2 1.2 1 0 0 1 1 1 0 UL97 HCV_NS5a_1a PF08300.13 ORF46873 - 0.043 13.9 0.2 0.12 12.5 0.0 1.8 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a zinc finger domain ICAM_N PF03921.14 ORF45922 - 0.061 13.0 0.1 0.066 12.9 0.1 1.1 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain US22 PF02393.16 ORF45922 - 0.098 12.9 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 US22 like SMP_LBD PF17047.5 ORF45214 - 0.058 12.9 0.2 0.064 12.7 0.2 1.1 1 0 0 1 1 1 0 Synaptotagmin-like mitochondrial-lipid-binding domain UL97 PF06734.12 ORF44860 - 0.043 13.7 0.2 0.054 13.4 0.2 1.2 1 0 0 1 1 1 0 UL97 DKCLD PF08068.12 ORF44385 - 0.13 12.4 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 DKCLD (NUC011) domain NuA4 PF09340.10 ORF43903 - 3.8e-20 71.5 0.8 4.8e-20 71.2 0.8 1.1 1 0 0 1 1 1 1 Histone acetyltransferase subunit NuA4 T2SSS_2 PF16549.5 ORF43903 - 0.11 12.5 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS) pilotin, S protein Nas2_N PF18265.1 ORF43903 - 0.14 12.1 0.1 0.2 11.6 0.1 1.3 1 0 0 1 1 1 0 Nas2 N_terminal domain Kelch_3 PF13415.6 ORF42896 - 0.68 10.3 4.3 12 6.4 0.7 2.4 2 0 0 2 2 2 0 Galactose oxidase, central domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks246.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks246.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks246.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks246.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Zn_Tnp_IS1595 PF12760.7 ORF4169 - 9.3 6.3 10.3 5.5 7.1 7.9 1.9 2 0 0 2 2 2 0 Transposase zinc-ribbon domain HTH_Tnp_IS1 PF12759.7 ORF38760 - 5.2e-31 106.0 0.5 7.8e-31 105.4 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 ORF38760 - 1.6e-20 72.5 6.5 3.6e-20 71.4 6.5 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF38760 - 0.0082 16.0 2.8 0.018 14.9 2.8 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 ORF38760 - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 ORF38760 - 0.028 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Dof PF02701.15 ORF38760 - 0.087 13.0 4.1 0.21 11.7 3.9 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger FdhE PF04216.12 ORF38760 - 0.14 12.1 7.2 0.19 11.6 7.2 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 ORF38760 - 3.2 7.8 6.2 5.5 7.1 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3450 PF11932.8 ORF37529 - 0.11 11.8 2.1 0.12 11.6 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4554 PF15091.6 ORF357 - 0.11 11.3 0.3 4.1 6.2 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4554) CTNNBL PF08216.11 ORF35034 - 0.063 13.5 0.5 0.8 9.9 0.1 2.1 2 1 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear PGA2 PF07543.12 ORF35034 - 2.2 8.3 7.1 3.2 7.7 7.1 1.3 1 1 0 1 1 1 0 Protein trafficking PGA2 Peptidase_M99_m PF17130.4 ORF34704 - 0.073 13.0 0.1 0.099 12.6 0.1 1.2 1 0 0 1 1 1 0 beta-barrel domain of carboxypeptidase M99 Selenoprotein_S PF06936.11 ORF32293 - 0.022 14.6 0.1 0.025 14.4 0.1 1.2 1 0 0 1 1 1 0 Selenoprotein S (SelS) MRAP PF15183.6 ORF32293 - 0.14 12.1 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family TMEM52 PF14979.6 ORF32293 - 0.78 9.6 3.1 1.1 9.2 3.1 1.3 1 0 0 1 1 1 0 Transmembrane 52 DUF5073 PF16817.5 ORF3203 - 0.029 14.4 0.0 0.034 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5073) CCDC158 PF15921.5 ORF31178 - 2.5 5.8 6.0 2.6 5.7 6.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 158 DUF1211 PF06736.11 ORF30973 - 0.45 11.0 5.2 0.67 10.4 5.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) DJ-1_PfpI PF01965.24 ORF30090 - 2.3e-09 37.3 0.0 2.5e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family Stathmin PF00836.19 ORF29643 - 0.071 13.1 0.1 0.078 12.9 0.1 1.1 1 0 0 1 1 1 0 Stathmin family PG_binding_2 PF08823.11 ORF28739 - 0.17 12.2 0.0 0.25 11.7 0.0 1.2 1 0 0 1 1 1 0 Putative peptidoglycan binding domain GluR_Homer-bdg PF10606.9 ORF27691 - 0.064 13.5 6.0 0.16 12.2 6.0 1.6 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor P5-ATPase PF12409.8 ORF27535 - 0.088 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 P5-type ATPase cation transporter COPI_assoc PF08507.10 ORF27462 - 4e-08 33.4 9.1 4.3e-08 33.3 9.1 1.0 1 0 0 1 1 1 1 COPI associated protein OppC_N PF12911.7 ORF27462 - 0.00035 20.5 1.6 0.2 11.7 0.1 2.3 2 0 0 2 2 2 2 N-terminal TM domain of oligopeptide transport permease C TMEM72 PF16054.5 ORF27462 - 0.18 11.5 2.2 0.24 11.1 2.2 1.3 1 1 0 1 1 1 0 Transmembrane protein family 72 DUF1206 PF06724.11 ORF27462 - 0.26 11.4 0.2 0.26 11.4 0.2 2.1 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1206) DUF4064 PF13273.6 ORF27462 - 0.49 10.7 5.1 1.5 9.1 5.1 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) HEPN_RiboL-PSP PF18735.1 ORF27156 - 0.036 14.0 0.1 0.042 13.8 0.1 1.2 1 0 0 1 1 1 0 RiboL-PSP-HEPN DUF3139 PF11337.8 ORF24128 - 0.11 13.1 2.1 0.16 12.6 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) DUF1179 PF06678.11 ORF24128 - 0.22 11.5 0.2 0.22 11.5 0.2 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1179) Membr_traf_MHD PF10540.9 ORF23274 - 0.023 14.9 0.3 0.027 14.6 0.3 1.1 1 0 0 1 1 1 0 Munc13 (mammalian uncoordinated) homology domain NPH3 PF03000.14 ORF23087 - 0.037 13.7 0.0 0.04 13.5 0.0 1.1 1 0 0 1 1 1 0 NPH3 family YppF PF14178.6 ORF23087 - 0.32 10.9 1.8 11 6.0 0.1 2.4 1 1 1 2 2 2 0 YppF-like protein DUF3079 PF11278.8 ORF21571 - 0.66 9.8 0.0 0.66 9.8 0.0 2.7 3 1 0 3 3 3 0 Protein of unknown function (DUF3079) DUF3270 PF11674.8 ORF20164 - 0.11 12.7 0.2 0.14 12.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF1589 PF07628.11 ORF2002 - 0.0025 18.0 0.3 0.0028 17.8 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1589) Rieske_2 PF13806.6 ORF19655 - 4e-40 136.0 0.0 4.4e-40 135.8 0.0 1.0 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Meth_synt_2 PF01717.18 ORF19419 - 0.068 12.4 0.0 0.085 12.1 0.0 1.2 1 0 0 1 1 1 0 Cobalamin-independent synthase, Catalytic domain Gemini_mov PF01708.16 ORF18472 - 0.0066 16.2 0.5 0.01 15.6 0.5 1.3 1 0 0 1 1 1 1 Geminivirus putative movement protein HemY_N PF07219.13 ORF18472 - 0.094 12.9 1.5 0.13 12.5 1.5 1.2 1 0 0 1 1 1 0 HemY protein N-terminus DUF2417 PF10329.9 ORF1823 - 1.5 8.2 10.3 1.9 7.9 10.0 1.2 1 1 0 1 1 1 0 Region of unknown function (DUF2417) Pardaxin PF07425.11 ORF1823 - 9.4 5.9 7.2 13 5.5 0.2 3.2 3 0 0 3 3 3 0 Pardaxin DUF3963 PF13124.6 ORF18170 - 2.1 8.4 4.7 3.1 7.9 4.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3963) Arch_fla_DE PF04659.13 ORF18013 - 0.2 11.6 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 Archaeal flagella protein HTH_Tnp_IS1 PF12759.7 ORF17148 - 5.2e-31 106.0 0.5 7.8e-31 105.4 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 ORF17148 - 1.6e-20 72.5 6.5 3.6e-20 71.4 6.5 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF17148 - 0.0082 16.0 2.8 0.018 14.9 2.8 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 ORF17148 - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 ORF17148 - 0.028 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Dof PF02701.15 ORF17148 - 0.087 13.0 4.1 0.21 11.7 3.9 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger FdhE PF04216.12 ORF17148 - 0.14 12.1 7.2 0.19 11.6 7.2 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 ORF17148 - 3.2 7.8 6.2 5.5 7.1 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NADH_B2 PF14813.6 ORF16809 - 0.61 9.9 4.1 1 9.2 4.1 1.4 1 0 0 1 1 1 0 NADH dehydrogenase 1 beta subcomplex subunit 2 Vps4_C PF09336.10 ORF15877 - 0.1 12.6 0.3 0.41 10.7 0.0 2.0 3 0 0 3 3 3 0 Vps4 C terminal oligomerisation domain PuR_N PF09182.10 ORF15321 - 0.076 13.0 0.0 0.14 12.1 0.0 1.5 1 1 1 2 2 2 0 Bacterial purine repressor, N-terminal QWRF PF04484.12 ORF152558 - 0.3 10.8 4.7 0.31 10.7 4.7 1.0 1 0 0 1 1 1 0 QWRF family DUF4441 PF14536.6 ORF152394 - 0.12 12.6 8.6 0.21 11.8 8.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) p450 PF00067.22 ORF15237 - 4.8e-25 88.2 0.7 5.4e-25 88.1 0.7 1.0 1 0 0 1 1 1 1 Cytochrome P450 Metallothio_2 PF01439.18 ORF151409 - 0.0098 16.8 0.0 0.014 16.3 0.0 1.3 1 0 0 1 1 1 1 Metallothionein HTH_Tnp_IS1 PF12759.7 ORF150575 - 5.2e-31 106.0 0.5 7.8e-31 105.4 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 ORF150575 - 1.6e-20 72.5 6.5 3.6e-20 71.4 6.5 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF150575 - 0.0082 16.0 2.8 0.018 14.9 2.8 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 ORF150575 - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 ORF150575 - 0.028 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Dof PF02701.15 ORF150575 - 0.087 13.0 4.1 0.21 11.7 3.9 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger FdhE PF04216.12 ORF150575 - 0.14 12.1 7.2 0.19 11.6 7.2 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 ORF150575 - 3.2 7.8 6.2 5.5 7.1 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Gemini_mov PF01708.16 ORF150354 - 0.0066 16.2 0.5 0.01 15.6 0.5 1.3 1 0 0 1 1 1 1 Geminivirus putative movement protein HemY_N PF07219.13 ORF150354 - 0.094 12.9 1.5 0.13 12.5 1.5 1.2 1 0 0 1 1 1 0 HemY protein N-terminus DUF1145 PF06611.12 ORF149461 - 0.26 11.3 2.4 3 7.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1145) DUF4689 PF15755.5 ORF146606 - 0.013 15.2 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4689) DUF2207 PF09972.9 ORF146321 - 0.016 14.0 0.6 0.018 13.8 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Glyco_hydro_19 PF00182.19 ORF146321 - 0.018 15.0 0.1 0.02 14.8 0.1 1.1 1 0 0 1 1 1 0 Chitinase class I Med12-PQL PF12144.8 ORF146321 - 0.066 13.1 0.4 0.069 13.0 0.4 1.1 1 0 0 1 1 1 0 Eukaryotic Mediator 12 catenin-binding domain CSG2 PF16965.5 ORF146321 - 0.068 12.1 1.0 0.073 12.0 1.0 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator Orf78 PF06024.12 ORF146321 - 0.24 11.7 6.2 0.6 10.4 6.2 1.8 1 1 0 1 1 1 0 Orf78 (ac78) DUF4808 PF16066.5 ORF146321 - 2.1 8.9 4.8 1 9.9 0.8 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4808) DUF3675 PF12428.8 ORF146321 - 2.3 8.8 4.9 1.2 9.7 0.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3675) DUF1764 PF08576.10 ORF146321 - 4.5 8.2 9.0 5.9 7.9 9.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF1764) Nucleos_tra2_C PF07662.13 ORF145291 - 1.3e-37 129.7 2.3 1.4e-37 129.6 2.3 1.0 1 0 0 1 1 1 1 Na+ dependent nucleoside transporter C-terminus Pam16 PF03656.13 ORF144224 - 4e-07 30.1 0.0 4.2e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Pam16 DnaJ PF00226.31 ORF144224 - 3.1e-05 24.0 0.1 5.2e-05 23.3 0.1 1.4 1 1 0 1 1 1 1 DnaJ domain Plasmodium_HRP PF05403.11 ORF14410 - 0.0023 17.8 1.7 0.0028 17.5 1.7 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF14410 - 0.15 12.1 6.3 2.3 8.2 0.6 2.4 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain HTH_39 PF14090.6 ORF14410 - 0.22 11.3 2.4 2.4 8.0 0.2 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain RPA_C PF08784.11 ORF14410 - 9.2 7.0 10.8 15 6.3 5.4 2.1 1 1 1 2 2 2 0 Replication protein A C terminal DUF2502 PF10697.9 ORF143499 - 5.3e-22 78.0 31.7 9.1e-22 77.2 31.7 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2502) YkuD_2 PF13645.6 ORF143126 - 0.12 11.8 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 L,D-transpeptidase catalytic domain YukC PF10140.9 ORF142952 - 0.038 12.8 0.2 0.038 12.8 0.2 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Anth_Ig PF05587.13 ORF142924 - 0.021 15.1 0.1 0.59 10.5 0.0 2.0 1 1 1 2 2 2 0 Anthrax receptor extracellular domain HECT PF00632.25 ORF142554 - 4.8e-30 105.1 0.1 5.2e-30 105.0 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) UCR_Fe-S_N PF10399.9 ORF142554 - 0.2 11.1 0.0 0.31 10.4 0.0 1.3 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Ribosomal_L35Ae PF01247.18 ORF142162 - 5.4e-31 106.6 0.1 6.2e-31 106.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 ORF142162 - 0.0012 19.0 0.1 0.98 9.7 0.0 2.1 2 0 0 2 2 2 2 RimM N-terminal domain DUF2080 PF09853.9 ORF142162 - 0.0077 16.0 0.6 0.37 10.6 0.1 2.4 1 1 1 2 2 2 2 Putative transposon-encoded protein (DUF2080) HTH_Tnp_IS1 PF12759.7 ORF141756 - 5.2e-31 106.0 0.5 7.8e-31 105.4 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 ORF141756 - 1.6e-20 72.5 6.5 3.6e-20 71.4 6.5 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF141756 - 0.0082 16.0 2.8 0.018 14.9 2.8 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 ORF141756 - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 ORF141756 - 0.028 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Dof PF02701.15 ORF141756 - 0.087 13.0 4.1 0.21 11.7 3.9 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger FdhE PF04216.12 ORF141756 - 0.14 12.1 7.2 0.19 11.6 7.2 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 ORF141756 - 3.2 7.8 6.2 5.5 7.1 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ubiquitin PF00240.23 ORF139853 - 3.6e-12 45.9 0.0 1e-11 44.4 0.0 1.7 2 0 0 2 2 2 1 Ubiquitin family Ubiquitin_4 PF18036.1 ORF139853 - 0.014 15.5 0.0 0.73 9.9 0.0 2.1 1 1 1 2 2 2 0 Ubiquitin-like domain Rad60-SLD PF11976.8 ORF139853 - 0.13 12.1 0.0 0.8 9.6 0.0 2.1 2 1 0 3 3 3 0 Ubiquitin-2 like Rad60 SUMO-like Conotoxin_I2 PF17557.2 ORF13889 - 0.91 9.7 16.2 3.6 7.8 7.4 2.5 2 0 0 2 2 2 0 I2-superfamily conotoxins Pet100 PF09803.9 ORF138023 - 0.0066 17.0 0.5 0.013 16.0 0.1 1.7 1 1 1 2 2 2 1 Pet100 Pox_A21 PF05323.12 ORF138023 - 0.078 13.6 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A21 Protein OAD_gamma PF04277.13 ORF138023 - 0.11 13.1 1.2 0.42 11.2 0.9 1.8 1 1 1 2 2 2 0 Oxaloacetate decarboxylase, gamma chain PEX11 PF05648.14 ORF137949 - 4.2e-09 36.2 0.0 4.2e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) Strumpellin PF10266.9 ORF136944 - 2.5e-15 55.4 0.0 2.8e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin Alpha_TIF PF02232.15 ORF135931 - 0.065 12.3 0.0 0.075 12.1 0.0 1.1 1 0 0 1 1 1 0 Alpha trans-inducing protein (Alpha-TIF) PIF PF05092.12 ORF135312 - 0.025 13.3 0.1 0.03 13.0 0.1 1.1 1 0 0 1 1 1 0 Per os infectivity Herpes_US9 PF06072.11 ORF133926 - 0.061 13.2 0.5 0.16 11.9 0.5 1.7 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 DHC_N1 PF08385.12 ORF133399 - 0.0093 14.7 0.5 0.01 14.5 0.5 1.1 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 1 MFS_1 PF07690.16 ORF132418 - 4.3e-06 25.9 11.7 4.5e-06 25.8 11.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF132418 - 1.4 7.7 8.0 1.6 7.5 8.0 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter RasGEF PF00617.19 ORF13100 - 0.048 13.9 0.0 0.058 13.6 0.0 1.2 1 0 0 1 1 1 0 RasGEF domain Herpes_UL6 PF01763.16 ORF130968 - 0.0011 17.6 1.2 0.0013 17.4 1.2 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like DUF883 PF05957.13 ORF130968 - 0.093 13.3 1.0 0.16 12.6 0.9 1.5 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) AviRa PF11599.8 ORF130968 - 0.12 11.8 3.0 0.16 11.4 3.0 1.1 1 0 0 1 1 1 0 RRNA methyltransferase AviRa DUF4407 PF14362.6 ORF130968 - 0.16 11.3 3.3 0.19 11.1 3.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Nab2p_Zf1 PF18260.1 ORF129631 - 0.045 13.7 1.4 0.92 9.5 0.2 3.1 3 0 0 3 3 3 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 PIF PF05092.12 ORF12922 - 0.025 13.3 0.1 0.03 13.0 0.1 1.1 1 0 0 1 1 1 0 Per os infectivity CENP-T_C PF15511.6 ORF128834 - 1.1e-08 35.1 0.2 1.4e-08 34.8 0.2 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TAF PF02969.17 ORF128834 - 2e-05 24.6 0.1 3.1e-05 24.0 0.1 1.4 1 1 0 1 1 1 1 TATA box binding protein associated factor (TAF) CBFD_NFYB_HMF PF00808.23 ORF128834 - 0.00015 22.0 0.1 0.00056 20.1 0.0 1.9 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF128834 - 0.00063 20.1 0.5 0.00092 19.6 0.5 1.4 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 ORF128834 - 0.00065 20.0 0.2 0.001 19.4 0.2 1.5 1 1 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 ORF128834 - 0.014 15.4 0.1 0.019 15.0 0.1 1.2 1 1 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF128834 - 0.067 13.7 0.1 0.1 13.1 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 ORF128834 - 0.11 12.5 0.0 0.64 10.1 0.0 1.8 2 0 0 2 2 2 0 Bromodomain associated HIGH_NTase1_ass PF16581.5 ORF128834 - 0.13 12.3 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Cytidyltransferase-related C-terminal region CCT PF06203.14 ORF128114 - 2.7e-17 62.5 12.6 2.7e-17 62.5 12.6 2.2 3 0 0 3 3 3 1 CCT motif CBFB_NFYA PF02045.15 ORF128114 - 0.022 15.3 7.7 0.051 14.2 7.7 1.6 1 0 0 1 1 1 0 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B CCT_2 PF09425.10 ORF128114 - 0.023 14.6 3.7 0.023 14.6 3.7 2.6 3 0 0 3 3 3 0 Divergent CCT motif Citrate_ly_lig PF08218.11 ORF128114 - 0.057 13.1 0.1 0.059 13.0 0.1 1.3 1 0 0 1 1 1 0 Citrate lyase ligase C-terminal domain Staphostatin_B PF09023.10 ORF12743 - 0.032 14.3 1.0 0.039 14.0 0.2 1.5 2 0 0 2 2 2 0 Staphostatin B DUF4689 PF15755.5 ORF126839 - 0.013 15.2 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4689) Cadherin_C_2 PF16492.5 ORF12628 - 0.21 12.3 2.8 0.39 11.5 2.8 1.5 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal Codanin-1_C PF15296.6 ORF125615 - 0.0058 16.7 0.7 0.0069 16.4 0.7 1.2 1 0 0 1 1 1 1 Codanin-1 C-terminus Chorion_1 PF01723.16 ORF125074 - 0.096 12.6 0.0 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 Chorion protein FGFR3_TM PF18123.1 ORF124729 - 0.094 12.3 5.1 1.6 8.3 1.0 2.5 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Ferrochelatase PF00762.19 ORF124567 - 0.04 13.0 0.1 0.042 12.9 0.1 1.2 1 1 0 1 1 1 0 Ferrochelatase Fer4_2 PF12797.7 ORF123162 - 6.1 7.1 10.1 10 6.5 0.2 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain YbfN PF13982.6 ORF121255 - 4.3e-49 164.8 6.5 5e-49 164.5 6.5 1.0 1 0 0 1 1 1 1 YbfN-like lipoprotein CLIP PF12032.8 ORF121255 - 0.31 11.4 2.8 0.47 10.8 1.6 1.9 1 1 1 2 2 2 0 Regulatory CLIP domain of proteinases TilS PF09179.11 ORF121011 - 0.012 16.1 0.1 0.021 15.3 0.1 1.5 1 0 0 1 1 1 0 TilS substrate binding domain C5HCH PF17982.1 ORF121011 - 0.051 13.7 4.3 0.1 12.7 0.1 2.1 1 1 1 2 2 2 0 NSD Cys-His rich domain Ceramidase PF05875.12 ORF120896 - 0.026 14.0 0.5 0.03 13.7 0.5 1.1 1 0 0 1 1 1 0 Ceramidase HTH_Tnp_IS1 PF12759.7 ORF120357 - 5.2e-31 106.0 0.5 7.8e-31 105.4 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 ORF120357 - 1.6e-20 72.5 6.5 3.6e-20 71.4 6.5 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF120357 - 0.0082 16.0 2.8 0.018 14.9 2.8 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 ORF120357 - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 ORF120357 - 0.028 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Dof PF02701.15 ORF120357 - 0.087 13.0 4.1 0.21 11.7 3.9 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger FdhE PF04216.12 ORF120357 - 0.14 12.1 7.2 0.19 11.6 7.2 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 ORF120357 - 3.2 7.8 6.2 5.5 7.1 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AP_endonuc_2 PF01261.24 ORF12002 - 3.6e-07 29.8 0.8 4.2e-07 29.6 0.8 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Scytalone_dh PF02982.14 ORF12002 - 0.08 12.7 0.1 0.098 12.4 0.1 1.1 1 0 0 1 1 1 0 Scytalone dehydratase Ferrochelatase PF00762.19 ORF119083 - 0.04 13.0 0.1 0.042 12.9 0.1 1.2 1 1 0 1 1 1 0 Ferrochelatase Yip1 PF04893.17 ORF118168 - 0.0069 16.1 0.8 0.0095 15.7 0.5 1.4 1 1 0 1 1 1 1 Yip1 domain RabGAP-TBC PF00566.18 ORF117777 - 2.6e-07 30.5 0.2 3.7e-07 30.0 0.2 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain LisH PF08513.11 ORF11657 - 0.00063 19.6 0.0 0.0012 18.7 0.0 1.5 1 0 0 1 1 1 1 LisH DUF3038 PF11237.8 ORF11657 - 0.028 14.5 0.1 0.033 14.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) RapH_N PF18801.1 ORF11657 - 0.092 12.8 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 response regulator aspartate phosphatase H, N terminal PP2C PF00481.21 ORF112738 - 1e-12 48.2 0.0 1.2e-12 48.1 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF112738 - 1.9e-05 24.7 0.0 2.2e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Robl_LC7 PF03259.17 ORF112288 - 1.3e-09 37.7 0.0 1.4e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain LAMTOR5 PF16672.5 ORF112288 - 0.085 12.8 0.1 0.17 11.8 0.1 1.5 1 1 0 1 1 1 0 Ragulator complex protein LAMTOR5 DUF1518 PF07469.12 ORF111797 - 3.7 8.0 11.4 6 7.3 0.6 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1518) KIAA1430 PF13879.6 ORF111096 - 9.4e-07 29.5 0.7 9.4e-07 29.5 0.7 1.7 2 0 0 2 2 2 1 KIAA1430 homologue UPF0242 PF06785.11 ORF111096 - 0.0087 16.2 2.3 0.0087 16.2 2.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Cep57_CLD_2 PF14197.6 ORF111096 - 0.06 13.4 1.3 0.081 13.0 1.3 1.2 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 PCRF PF03462.18 ORF11010 - 1.1 9.0 18.4 0.7 9.7 7.2 1.8 1 1 1 2 2 2 0 PCRF domain HBM PF16591.5 ORF11010 - 1.5 8.2 27.5 0.36 10.2 12.5 2.0 1 1 1 2 2 2 0 Helical bimodular sensor domain Lyase_8_N PF08124.11 ORF11010 - 2.3 7.1 10.4 2.6 6.9 10.4 1.2 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain tRNA-synt_His PF13393.6 ORF11010 - 6.1 6.0 14.1 14 4.9 14.1 1.5 1 1 0 1 1 1 0 Histidyl-tRNA synthetase Allexi_40kDa PF05549.11 ORF11010 - 7.9 5.9 17.5 40 3.6 17.3 1.8 1 1 0 1 1 1 0 Allexivirus 40kDa protein T6SS_VipA PF05591.12 ORF11010 - 9.1 6.1 28.2 2.2 8.1 11.1 2.1 1 1 1 2 2 2 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 DUF725 PF05267.12 ORF109816 - 0.3 11.1 3.7 0.38 10.7 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF725) HTH_Tnp_IS1 PF12759.7 ORF109569 - 5.2e-31 106.0 0.5 7.8e-31 105.4 0.5 1.3 1 0 0 1 1 1 1 InsA C-terminal domain Zn_Tnp_IS1 PF03811.13 ORF109569 - 1.6e-20 72.5 6.5 3.6e-20 71.4 6.5 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zinc_ribbon_4 PF13717.6 ORF109569 - 0.0082 16.0 2.8 0.018 14.9 2.8 1.6 1 1 0 1 1 1 1 zinc-ribbon domain HTH_23 PF13384.6 ORF109569 - 0.018 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 ORF109569 - 0.028 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-Dof PF02701.15 ORF109569 - 0.087 13.0 4.1 0.21 11.7 3.9 1.8 1 1 0 1 1 1 0 Dof domain, zinc finger FdhE PF04216.12 ORF109569 - 0.14 12.1 7.2 0.19 11.6 7.2 1.3 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 ORF109569 - 3.2 7.8 6.2 5.5 7.1 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NFACT-R_1 PF05670.13 ORF109421 - 0.085 13.5 0.7 0.11 13.1 0.7 1.2 1 0 0 1 1 1 0 NFACT protein RNA binding domain DUF3270 PF11674.8 ORF109265 - 0.11 12.7 0.2 0.14 12.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) NuA4 PF09340.10 ORF108791 - 0.032 14.1 0.1 0.69 9.8 0.0 2.1 2 0 0 2 2 2 0 Histone acetyltransferase subunit NuA4 AID PF18767.1 ORF108651 - 0.18 11.8 0.2 0.18 11.8 0.2 2.0 2 2 1 3 3 3 0 Activation induced deaminase Ras PF00071.22 ORF108504 - 1.9e-11 43.8 0.0 2.7e-11 43.3 0.0 1.2 1 0 0 1 1 1 1 Ras family PIF PF05092.12 ORF107574 - 0.025 13.3 0.1 0.03 13.0 0.1 1.1 1 0 0 1 1 1 0 Per os infectivity Glu_syn_central PF04898.14 ORF107333 - 0.013 15.0 0.0 0.013 15.0 0.0 1.0 1 0 0 1 1 1 0 Glutamate synthase central domain Alpha_TIF PF02232.15 ORF106350 - 0.065 12.3 0.0 0.075 12.1 0.0 1.1 1 0 0 1 1 1 0 Alpha trans-inducing protein (Alpha-TIF) CHORD PF04968.12 ORF104769 - 1.5e-24 86.5 14.2 2.2e-24 85.9 14.2 1.3 1 0 0 1 1 1 1 CHORD Ras PF00071.22 ORF10476 - 6.5e-08 32.3 0.1 8.3e-08 32.0 0.1 1.2 1 0 0 1 1 1 1 Ras family DUF2237 PF09996.9 ORF104645 - 1.5 8.8 6.2 1.9 8.5 3.1 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2237) cNMP_binding PF00027.29 ORF103438 - 0.00065 19.7 0.0 0.0012 18.9 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain RCC1_2 PF13540.6 ORF103031 - 2.4e-23 81.3 21.6 3.4e-12 45.8 3.2 3.1 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF103031 - 0.016 15.8 25.4 0.38 11.4 0.2 4.7 3 2 1 4 4 4 0 Regulator of chromosome condensation (RCC1) repeat FliG_N PF14842.6 ORF102505 - 0.02 15.4 0.7 0.026 15.0 0.2 1.5 2 0 0 2 2 2 0 FliG N-terminal domain Nairo_nucleo PF02477.15 ORF102505 - 0.045 12.6 1.5 0.053 12.3 1.5 1.1 1 0 0 1 1 1 0 Nucleocapsid N protein CorA PF01544.18 ORF102505 - 0.048 13.0 7.2 0.054 12.8 7.2 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF5486 PF17588.2 ORF102505 - 0.071 13.0 0.5 0.14 12.1 0.1 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5486) Retrotrans_gag PF03732.17 ORF102505 - 0.085 13.1 1.5 0.32 11.3 0.6 2.2 1 1 1 2 2 2 0 Retrotransposon gag protein DUF1690 PF07956.11 ORF102505 - 0.11 12.9 4.4 0.18 12.2 4.5 1.4 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) KIP1 PF07765.12 ORF102505 - 0.18 11.9 7.3 0.2 11.8 6.8 1.4 1 1 0 1 1 1 0 KIP1-like protein Fib_alpha PF08702.10 ORF102505 - 0.5 10.5 7.0 0.48 10.6 2.9 2.2 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family FliD_N PF02465.18 ORF102505 - 0.7 10.6 5.1 9.1 7.1 0.9 2.4 1 1 2 3 3 3 0 Flagellar hook-associated protein 2 N-terminus AAA_23 PF13476.6 ORF102505 - 3.7 8.0 11.8 4.5 7.7 11.8 1.1 1 0 0 1 1 1 0 AAA domain NUDIX PF00293.28 ORF101997 - 0.0014 18.6 2.2 0.0018 18.3 2.2 1.1 1 0 0 1 1 1 1 NUDIX domain SplA PF11132.8 ORF101997 - 0.058 13.2 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 Transcriptional regulator protein (SplA) GPR15L PF15854.5 ORF101695 - 0.038 14.2 3.4 0.071 13.3 3.4 1.4 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 Pkinase_C PF00433.24 ORF101573 - 0.065 14.0 0.5 0.16 12.7 0.2 1.7 1 1 1 2 2 2 0 Protein kinase C terminal domain S_locus_glycop PF00954.20 ORF100048 - 0.014 15.9 0.0 0.019 15.5 0.0 1.1 1 0 0 1 1 1 0 S-locus glycoprotein domain CPP1-like PF11833.8 ORF100048 - 0.048 13.3 0.0 0.056 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like MFS_1 PF07690.16 NODE_54664_length_319_cov_1.257042_g46733_i0reverse_frame_1 - 1.1e-06 27.9 0.1 1.3e-06 27.7 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_54664_length_319_cov_1.257042_g46733_i0reverse_frame_1 - 0.0018 17.3 1.0 0.002 17.1 1.0 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter DUF4943 PF16301.5 NODE_54664_length_319_cov_1.257042_g46733_i0reverse_frame_1 - 0.093 12.8 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4943) P66_CC PF16563.5 NODE_54650_length_319_cov_1.774648_g46719_i0forward_frame_1 - 0.062 12.9 2.5 0.12 12.0 2.5 1.5 1 0 0 1 1 1 0 Coiled-coil and interaction region of P66A and P66B with MBD2 Latarcin PF10279.9 NODE_54650_length_319_cov_1.774648_g46719_i0forward_frame_1 - 0.089 13.2 0.1 0.13 12.7 0.1 1.2 1 0 0 1 1 1 0 Latarcin precursor PhzC-PhzF PF02567.16 NODE_54646_length_319_cov_1.933099_g46715_i0reverse_frame_1 - 1.1e-25 90.7 0.0 1.1e-25 90.6 0.0 1.0 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein DUF639 PF04842.12 NODE_54645_length_319_cov_1.992958_g46714_i0reverse_frame_1 - 0.058 12.8 0.2 0.072 12.5 0.2 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) Lustrin_cystein PF14625.6 NODE_54643_length_319_cov_2.123239_g46712_i0reverse_frame_1 - 0.66 10.4 5.5 0.27 11.6 1.9 2.2 3 0 0 3 3 3 0 Lustrin, cysteine-rich repeated domain RCR PF12273.8 NODE_54634_length_319_cov_2.454225_g46703_i0forward_frame_1 - 0.64 10.7 1.3 0.99 10.1 1.3 1.2 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red Ank_5 PF13857.6 NODE_54628_length_319_cov_2.799296_g46697_i0forward_frame_1 - 1.7e-19 69.6 2.2 8e-09 35.6 0.0 2.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_54628_length_319_cov_2.799296_g46697_i0forward_frame_1 - 6.8e-18 65.0 0.3 4.7e-08 33.5 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_54628_length_319_cov_2.799296_g46697_i0forward_frame_1 - 1.5e-17 63.7 2.2 6.8e-09 36.1 0.1 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_54628_length_319_cov_2.799296_g46697_i0forward_frame_1 - 3.8e-15 55.5 0.4 1.2e-07 31.9 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 NODE_54628_length_319_cov_2.799296_g46697_i0forward_frame_1 - 8.8e-15 53.3 1.1 9.6e-06 25.6 0.0 3.2 3 0 0 3 3 3 3 Ankyrin repeat HTH_AraC PF00165.23 NODE_54624_length_319_cov_2.845070_g46693_i0reverse_frame_1 - 5.4e-05 23.2 1.4 7.9e-05 22.7 1.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 NODE_54624_length_319_cov_2.845070_g46693_i0reverse_frame_1 - 0.003 17.8 0.2 0.0042 17.3 0.2 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Peptidase_C2 PF00648.21 NODE_54622_length_319_cov_2.957746_g46691_i0reverse_frame_1 - 2.6e-20 72.7 0.1 3.3e-20 72.3 0.1 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease YyzF PF14116.6 NODE_54611_length_319_cov_4.697183_g46680_i0forward_frame_1 - 0.084 12.9 0.2 0.12 12.4 0.2 1.2 1 0 0 1 1 1 0 YyzF-like protein Peptidase_C1_2 PF03051.15 NODE_54597_length_319_cov_61.461268_g46666_i0forward_frame_1 - 0.14 10.9 1.7 0.15 10.8 1.7 1.0 1 0 0 1 1 1 0 Peptidase C1-like family Dimer_Tnp_Tn5 PF02281.16 NODE_54593_length_319_cov_65.045775_g46662_i0forward_frame_1 - 0.18 11.5 0.6 0.34 10.6 0.6 1.4 1 0 0 1 1 1 0 Transposase Tn5 dimerisation domain Gal_mutarotas_2 PF13802.6 NODE_54589_length_319_cov_70.116197_g46658_i0reverse_frame_1 - 0.15 12.4 0.0 0.26 11.7 0.0 1.4 1 0 0 1 1 1 0 Galactose mutarotase-like Zn_peptidase PF04228.13 NODE_54584_length_319_cov_77.109155_g46653_i0reverse_frame_1 - 0.19 11.2 0.0 0.24 10.8 0.0 1.1 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase Sterol-sensing PF12349.8 NODE_54581_length_319_cov_83.253521_g46650_i0forward_frame_1 - 0.26 11.1 6.1 4.3 7.2 0.3 2.1 1 1 1 2 2 2 0 Sterol-sensing domain of SREBP cleavage-activation Stimulus_sens_1 PF13756.6 NODE_54578_length_319_cov_92.186620_g46647_i0forward_frame_1 - 0.0027 18.3 0.0 0.0036 17.9 0.0 1.2 1 0 0 1 1 1 1 Stimulus-sensing domain ETRAMP PF09716.10 NODE_54578_length_319_cov_92.186620_g46647_i0forward_frame_1 - 0.0052 16.8 2.9 0.0066 16.5 2.9 1.2 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Transglut_C PF00927.22 NODE_54572_length_319_cov_133.742958_g46641_i0forward_frame_1 - 0.024 14.8 0.0 0.031 14.4 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase family, C-terminal ig like domain BRF1 PF07741.13 NODE_54571_length_319_cov_135.975352_g46640_i0reverse_frame_1 - 5.3 7.4 9.3 35 4.8 0.0 2.1 1 1 0 2 2 2 0 Brf1-like TBP-binding domain Ndc1_Nup PF09531.10 NODE_54571_length_319_cov_135.975352_g46640_i0forward_frame_1 - 0.52 8.9 5.4 0.58 8.8 5.4 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup EpmC PF04315.12 NODE_54563_length_319_cov_204.926056_g46632_i0reverse_frame_1 - 0.052 13.2 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 Elongation factor P hydroxylase Mpv17_PMP22 PF04117.12 NODE_54557_length_319_cov_390.838028_g46626_i0reverse_frame_1 - 3.1e-16 59.3 1.8 3.1e-16 59.3 1.8 1.5 2 0 0 2 2 2 1 Mpv17 / PMP22 family DUF1404 PF07185.11 NODE_54557_length_319_cov_390.838028_g46626_i0reverse_frame_1 - 0.067 12.9 0.1 0.084 12.6 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1404) FAM220 PF15487.6 NODE_54554_length_319_cov_592.267606_g46623_i0reverse_frame_1 - 0.025 14.2 0.2 0.032 13.9 0.2 1.3 1 0 0 1 1 1 0 FAM220 family Herpeto_peptide PF14409.6 NODE_54554_length_319_cov_592.267606_g46623_i0reverse_frame_1 - 0.9 9.8 11.2 1.2 9.4 1.4 2.4 1 1 1 2 2 2 0 Ribosomally synthesized peptide in Herpetosiphon FNIP PF05725.12 NODE_54554_length_319_cov_592.267606_g46623_i0forward_frame_1 - 1.6e-20 73.0 11.3 2.2e-11 43.7 1.7 2.2 1 1 1 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_54554_length_319_cov_592.267606_g46623_i0forward_frame_1 - 0.014 15.4 1.1 0.061 13.3 1.1 1.6 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) TIMELESS_C PF05029.13 NODE_54549_length_320_cov_1.400000_g46618_i0reverse_frame_1 - 0.015 14.5 0.0 0.015 14.5 0.0 1.1 1 0 0 1 1 1 0 Timeless protein C terminal region DUF1635 PF07795.11 NODE_54549_length_320_cov_1.400000_g46618_i0reverse_frame_1 - 0.21 11.4 1.7 0.78 9.6 1.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1635) UPF0259 PF06790.11 NODE_54549_length_320_cov_1.400000_g46618_i0forward_frame_1 - 9.7e-19 68.1 5.0 1.3e-18 67.7 5.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0259) MASE4 PF17158.4 NODE_54547_length_320_cov_1.501754_g46616_i0reverse_frame_1 - 1.2e-21 77.1 13.8 1.4e-21 76.9 13.8 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain DUF2070 PF09843.9 NODE_54547_length_320_cov_1.501754_g46616_i0reverse_frame_1 - 0.55 8.5 7.6 0.57 8.4 7.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF1804 PF08822.11 NODE_54535_length_320_cov_1.884211_g46604_i0forward_frame_1 - 0.037 14.0 0.0 0.048 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) LRR_9 PF14580.6 NODE_54534_length_320_cov_1.926316_g46603_i0forward_frame_1 - 1.1e-06 28.3 0.8 1.9e-06 27.5 0.8 1.3 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 NODE_54534_length_320_cov_1.926316_g46603_i0forward_frame_1 - 0.00015 22.0 10.4 0.0013 19.0 8.2 2.4 1 1 0 2 2 2 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_54534_length_320_cov_1.926316_g46603_i0forward_frame_1 - 0.0042 16.8 5.1 0.052 13.3 4.5 2.5 2 1 0 2 2 2 1 Leucine rich repeat LRR_1 PF00560.33 NODE_54534_length_320_cov_1.926316_g46603_i0forward_frame_1 - 4.4 8.2 10.5 24 6.0 2.8 3.5 2 2 1 3 3 3 0 Leucine Rich Repeat Poxvirus_B22R PF04395.12 NODE_54531_length_320_cov_2.049123_g46600_i0forward_frame_1 - 0.11 12.0 0.0 0.34 10.4 0.0 1.7 1 1 1 2 2 2 0 Poxvirus B22R protein TAFII28 PF04719.14 NODE_54525_length_320_cov_2.470175_g46594_i0forward_frame_1 - 0.18 11.9 0.0 0.31 11.2 0.0 1.4 1 0 0 1 1 1 0 hTAFII28-like protein conserved region DUF5082 PF16888.5 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.0096 16.2 3.1 0.052 13.8 3.2 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF5082) OmpH PF03938.14 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.014 15.7 2.4 0.019 15.3 2.4 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) RapA_C PF12137.8 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.018 14.1 0.4 0.018 14.1 0.4 1.1 1 0 0 1 1 1 0 RNA polymerase recycling family C-terminal Snapin_Pallidin PF14712.6 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.024 15.1 3.0 0.039 14.4 3.0 1.4 1 1 0 1 1 1 0 Snapin/Pallidin FBP_C PF16571.5 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.038 13.5 0.5 0.048 13.2 0.5 1.1 1 0 0 1 1 1 0 FBP C-terminal treble-clef zinc-finger Phage_holin_7_1 PF16081.5 NODE_54521_length_320_cov_2.600000_g46590_i0forward_frame_1 - 0.13 12.4 0.1 0.14 12.4 0.1 1.2 1 0 0 1 1 1 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family DUF5383 PF17355.2 NODE_54519_length_320_cov_2.771930_g46588_i0forward_frame_1 - 3.1 8.2 7.3 30 5.0 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5383) zf-C3HC PF07967.13 NODE_54515_length_320_cov_3.073684_g46584_i0reverse_frame_1 - 0.065 13.3 0.1 0.08 13.0 0.1 1.2 1 0 0 1 1 1 0 C3HC zinc finger-like Rhomboid PF01694.22 NODE_54514_length_320_cov_3.182456_g46583_i0forward_frame_1 - 3.3e-09 36.9 1.9 3.3e-09 36.9 1.9 1.9 2 0 0 2 2 2 1 Rhomboid family Metallothio_Euk PF12749.7 NODE_54513_length_320_cov_3.252632_g46582_i0reverse_frame_1 - 6.1 7.1 10.2 2.8 8.1 8.0 1.7 2 1 0 2 2 2 0 Eukaryotic metallothionein KASH PF10541.9 NODE_54512_length_320_cov_3.259649_g46581_i0reverse_frame_1 - 0.46 10.8 12.3 0.13 12.6 3.6 2.4 2 1 0 2 2 2 0 Nuclear envelope localisation domain Plant_NMP1 PF06694.11 NODE_54512_length_320_cov_3.259649_g46581_i0forward_frame_1 - 0.076 12.1 0.5 0.08 12.0 0.5 1.0 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) Tetraspanin PF00335.20 NODE_54502_length_320_cov_26.175439_g46571_i0forward_frame_1 - 0.18 11.5 4.4 0.21 11.3 4.4 1.1 1 0 0 1 1 1 0 Tetraspanin family TIG_plexin PF17960.1 NODE_54500_length_320_cov_43.189474_g46569_i0reverse_frame_1 - 0.059 13.4 0.0 0.091 12.8 0.0 1.3 1 0 0 1 1 1 0 TIG domain DUF2069 PF09842.9 NODE_54499_length_320_cov_46.070175_g46568_i0forward_frame_1 - 0.12 12.6 4.4 0.16 12.2 4.4 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2069) DUF4501 PF14946.6 NODE_54487_length_320_cov_68.242105_g46556_i0forward_frame_1 - 0.18 11.8 0.7 0.22 11.6 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Defensin_beta PF00711.19 NODE_54481_length_320_cov_72.070175_g46550_i0forward_frame_1 - 0.058 13.4 0.6 0.14 12.2 0.1 1.8 2 0 0 2 2 2 0 Beta defensin DUF3123 PF11321.8 NODE_54479_length_320_cov_75.442105_g46548_i0forward_frame_1 - 0.36 11.5 5.6 0.49 11.1 5.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3123) NnrS PF05940.12 NODE_54478_length_320_cov_76.543860_g46547_i0reverse_frame_1 - 0.25 10.7 0.0 0.3 10.4 0.0 1.1 1 0 0 1 1 1 0 NnrS protein TK PF00265.18 NODE_54476_length_320_cov_88.680702_g46545_i0reverse_frame_1 - 0.018 14.9 0.4 0.019 14.8 0.4 1.1 1 0 0 1 1 1 0 Thymidine kinase DPPIV_rep PF18811.1 NODE_54470_length_320_cov_113.957895_g46539_i0reverse_frame_1 - 0.13 12.3 0.2 0.22 11.5 0.2 1.4 1 0 0 1 1 1 0 Dipeptidyl peptidase IV (DPP IV) low complexity region DUF2244 PF10003.9 NODE_54454_length_320_cov_382.371930_g46523_i0forward_frame_1 - 8.1 6.1 6.9 12 5.6 6.9 1.5 1 1 0 1 1 1 0 Integral membrane protein (DUF2244) M-inducer_phosp PF06617.13 NODE_54451_length_320_cov_614.424561_g46520_i0forward_frame_1 - 0.0049 16.2 0.4 0.0053 16.1 0.4 1.0 1 0 0 1 1 1 1 M-phase inducer phosphatase TUDOR PF00567.24 NODE_54448_length_321_cov_1.475524_g46517_i0reverse_frame_1 - 0.083 12.9 1.1 0.099 12.7 1.1 1.1 1 0 0 1 1 1 0 Tudor domain DUF3385 PF11865.8 NODE_54433_length_321_cov_2.104895_g46502_i0forward_frame_1 - 0.084 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) Fer4 PF00037.27 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_1 - 0.99 9.3 12.0 1.2 9.1 1.5 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_1 - 1.3 9.2 13.8 0.3 11.3 1.0 3.6 4 0 0 4 4 4 0 4Fe-4S binding domain LysR_substrate PF03466.20 NODE_54424_length_321_cov_2.395105_g46493_i0forward_frame_1 - 2e-09 37.2 0.1 2.8e-09 36.7 0.1 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 NODE_54424_length_321_cov_2.395105_g46493_i0forward_frame_1 - 9.9e-05 22.2 0.1 0.00022 21.1 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family TilS_C PF11734.8 NODE_54423_length_321_cov_2.479021_g46492_i0forward_frame_1 - 0.073 12.5 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 TilS substrate C-terminal domain MORN PF02493.20 NODE_54422_length_321_cov_2.486014_g46491_i0reverse_frame_1 - 0.0087 15.9 0.2 0.016 15.1 0.2 1.4 1 0 0 1 1 1 1 MORN repeat APOBEC2 PF18772.1 NODE_54422_length_321_cov_2.486014_g46491_i0forward_frame_1 - 0.0028 17.7 1.1 0.003 17.6 1.1 1.1 1 0 0 1 1 1 1 APOBEC2 SNAD4 PF18750.1 NODE_54422_length_321_cov_2.486014_g46491_i0forward_frame_1 - 0.0088 16.2 1.3 0.0099 16.0 1.3 1.2 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 NAD1 PF18778.1 NODE_54422_length_321_cov_2.486014_g46491_i0forward_frame_1 - 0.02 15.0 1.4 0.02 15.0 1.4 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 Phi_1 PF04674.12 NODE_54415_length_321_cov_3.097902_g46484_i0reverse_frame_1 - 0.1 11.9 0.2 0.11 11.7 0.2 1.0 1 0 0 1 1 1 0 Phosphate-induced protein 1 conserved region Thioredoxin PF00085.20 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 5.7e-32 109.8 0.0 6.2e-32 109.7 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 6e-07 29.9 0.0 5.2e-06 26.9 0.0 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 1.4e-06 28.5 0.0 0.00011 22.4 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_9 PF14595.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.00016 21.5 0.0 0.00017 21.4 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin TraF PF13728.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.00033 20.5 0.0 0.00039 20.3 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein OST3_OST6 PF04756.13 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.0032 16.9 0.0 0.0039 16.6 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_7 PF13899.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.0061 16.7 0.0 0.0099 16.0 0.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.21 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.0099 15.8 0.0 0.012 15.5 0.0 1.3 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.013 15.2 0.0 0.029 14.1 0.0 1.5 1 1 1 2 2 2 0 Redoxin Thioredoxin_3 PF13192.6 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.015 15.4 0.0 0.018 15.1 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin domain HyaE PF07449.11 NODE_54410_length_321_cov_4.174825_g46479_i0forward_frame_1 - 0.15 12.0 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Sgf11_N PF18519.1 NODE_54409_length_321_cov_4.622378_g46478_i0forward_frame_1 - 0.081 12.5 0.1 0.18 11.4 0.1 1.6 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain MRVI1 PF05781.12 NODE_54408_length_321_cov_4.748252_g46477_i0reverse_frame_1 - 0.099 11.3 0.6 0.12 11.1 0.6 1.0 1 0 0 1 1 1 0 MRVI1 protein CcdA PF07362.12 NODE_54397_length_321_cov_43.853147_g46466_i0reverse_frame_1 - 0.037 14.4 0.6 0.072 13.5 0.6 1.5 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA Lig_chan PF00060.26 NODE_54390_length_321_cov_71.164336_g46459_i0reverse_frame_1 - 0.087 12.7 0.1 0.2 11.5 0.0 1.5 1 1 1 2 2 2 0 Ligand-gated ion channel Sigma70_r1_2 PF00140.20 NODE_54388_length_321_cov_71.472028_g46457_i0forward_frame_1 - 0.065 13.3 0.0 2.2 8.4 0.0 2.2 2 0 0 2 2 2 0 Sigma-70 factor, region 1.2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks247.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks247.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks247.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks247.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CENP-B_dimeris PF09026.10 NODE_54382_length_321_cov_84.216783_g46451_i0forward_frame_1 - 0.0081 16.5 0.3 0.012 16.0 0.3 1.2 1 0 0 1 1 1 1 Centromere protein B dimerisation domain LRR19-TM PF15176.6 NODE_54380_length_321_cov_94.311189_g46449_i0reverse_frame_1 - 0.2 11.7 0.6 0.24 11.4 0.6 1.3 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain FYVE PF01363.21 NODE_54379_length_321_cov_98.902098_g46448_i0forward_frame_1 - 0.042 14.0 5.4 0.089 12.9 5.4 1.4 1 1 0 1 1 1 0 FYVE zinc finger TAT_signal PF10518.9 NODE_54377_length_321_cov_104.779720_g46446_i0reverse_frame_1 - 0.38 10.7 1.7 0.45 10.4 0.1 2.0 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence RAP PF08373.10 NODE_54374_length_321_cov_126.793706_g46443_i0reverse_frame_1 - 8.7e-06 25.7 0.0 1.2e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 NODE_54374_length_321_cov_126.793706_g46443_i0reverse_frame_1 - 0.01 16.0 0.0 0.015 15.5 0.0 1.3 1 0 0 1 1 1 0 REase_MTES_1575 DUF3482 PF11981.8 NODE_54361_length_321_cov_19379.020979_g46430_i0forward_frame_1 - 0.0079 15.6 5.6 0.009 15.4 5.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) ETRAMP PF09716.10 NODE_54361_length_321_cov_19379.020979_g46430_i0forward_frame_1 - 0.15 12.1 1.0 0.19 11.8 1.0 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) NPM1-C PF16276.5 NODE_54359_length_322_cov_0.930314_g46428_i0reverse_frame_2 - 0.049 13.6 0.7 2.5 8.2 0.0 2.8 2 1 1 3 3 3 0 Nucleophosmin C-terminal domain CENP-B_dimeris PF09026.10 NODE_54357_length_322_cov_1.069686_g46426_i0reverse_frame_3 - 0.26 11.7 8.4 0.38 11.2 8.4 1.3 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DNA_pol_phi PF04931.13 NODE_54357_length_322_cov_1.069686_g46426_i0reverse_frame_3 - 3.5 5.6 7.2 3.7 5.5 7.2 1.1 1 0 0 1 1 1 0 DNA polymerase phi Cwf_Cwc_15 PF04889.12 NODE_54357_length_322_cov_1.069686_g46426_i0reverse_frame_3 - 5.1 6.8 9.8 5.7 6.6 9.8 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Zip PF02535.22 NODE_54357_length_322_cov_1.069686_g46426_i0forward_frame_2 - 0.27 10.4 5.1 0.28 10.3 5.1 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter SelP_N PF04592.14 NODE_54357_length_322_cov_1.069686_g46426_i0forward_frame_2 - 1.3 8.3 23.1 1.8 7.9 23.1 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region eIF3_N PF09440.10 NODE_54354_length_322_cov_1.299652_g46423_i0reverse_frame_2 - 0.04 14.4 0.5 0.05 14.0 0.5 1.2 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain Chromo_2 PF18704.1 NODE_54354_length_322_cov_1.299652_g46423_i0reverse_frame_2 - 0.054 13.8 0.4 0.11 12.8 0.0 1.8 2 0 0 2 2 2 0 Chromatin organization modifier domain 2 YWFCY PF14293.6 NODE_54353_length_322_cov_1.344948_g46422_i0reverse_frame_2 - 0.2 12.0 3.3 0.36 11.2 3.3 1.5 1 0 0 1 1 1 0 YWFCY protein Leu_zip PF15294.6 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.0013 18.3 4.3 0.0016 18.0 4.3 1.0 1 0 0 1 1 1 1 Leucine zipper DUF812 PF05667.11 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.0023 16.9 6.0 0.0027 16.7 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) GAS PF13851.6 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.0038 16.6 6.1 0.0042 16.5 6.1 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding TMF_TATA_bd PF12325.8 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.0038 17.4 6.5 0.0049 17.1 6.5 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding IL31 PF15209.6 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.014 15.1 0.2 0.023 14.5 0.2 1.3 1 0 0 1 1 1 0 Interleukin 31 TILa PF12714.7 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.092 12.7 4.1 0.15 12.0 4.1 1.3 1 0 0 1 1 1 0 TILa domain TMPIT PF07851.13 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.12 11.6 4.7 0.13 11.5 4.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein Uso1_p115_C PF04871.13 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.14 12.6 6.9 0.16 12.3 6.9 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region FapA PF03961.13 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.2 10.2 3.5 0.22 10.1 3.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A TMF_DNA_bd PF12329.8 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.21 11.6 9.1 0.31 11.1 9.1 1.2 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Tho2 PF11262.8 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.38 9.9 5.8 0.39 9.9 5.8 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ZapB PF06005.12 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.85 10.1 11.0 2.1 8.9 9.4 1.9 1 1 1 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 0.86 9.4 10.1 0.37 10.6 2.9 2.1 1 1 1 2 2 2 0 Septum formation initiator MscS_TM PF12794.7 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 2.4 7.0 3.5 3.1 6.6 3.5 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF4337 PF14235.6 NODE_54352_length_322_cov_1.362369_g46421_i0reverse_frame_2 - 4.6 7.3 6.6 5.5 7.1 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4716 PF15837.5 NODE_54350_length_322_cov_1.393728_g46419_i0forward_frame_3 - 0.037 14.1 0.7 0.037 14.1 0.7 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4716) PRD PF00874.20 NODE_54348_length_322_cov_1.574913_g46417_i0forward_frame_2 - 0.027 14.8 0.5 0.044 14.1 0.5 1.4 1 0 0 1 1 1 0 PRD domain DUF2701 PF10857.8 NODE_54348_length_322_cov_1.574913_g46417_i0forward_frame_2 - 0.056 13.5 0.2 0.098 12.7 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) SecIII_SopE_N PF05364.14 NODE_54343_length_322_cov_1.714286_g46412_i0reverse_frame_2 - 0.015 15.4 0.1 0.023 14.7 0.1 1.3 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Pcc1 PF09341.10 NODE_54342_length_322_cov_1.756098_g46411_i0reverse_frame_2 - 0.18 12.0 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Transcription factor Pcc1 RVT_1 PF00078.27 NODE_54341_length_322_cov_1.777003_g46410_i0reverse_frame_3 - 0.00049 19.7 0.0 0.00059 19.4 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) ASFV_L11L PF05293.11 NODE_54337_length_322_cov_1.905923_g46406_i0forward_frame_3 - 2.2 8.7 14.7 0.36 11.2 8.0 2.1 1 1 1 2 2 2 0 African swine fever virus (ASFV) L11L protein LRR_8 PF13855.6 NODE_54336_length_322_cov_1.923345_g46405_i0forward_frame_2 - 0.08 12.7 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Leucine rich repeat REJ PF02010.15 NODE_54335_length_322_cov_1.951220_g46404_i0reverse_frame_3 - 0.014 14.2 0.6 0.016 14.1 0.6 1.0 1 0 0 1 1 1 0 REJ domain DUF5391 PF17369.2 NODE_54335_length_322_cov_1.951220_g46404_i0forward_frame_2 - 0.27 11.2 2.8 0.33 11.0 2.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5391) DUF4227 PF14004.6 NODE_54332_length_322_cov_2.000000_g46401_i0forward_frame_2 - 0.23 11.5 1.0 0.5 10.4 1.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) Pox_A9 PF04835.12 NODE_54328_length_322_cov_2.128920_g46397_i0reverse_frame_3 - 0.064 13.4 2.5 0.11 12.6 2.5 1.4 1 0 0 1 1 1 0 A9 protein conserved region Ion_trans PF00520.31 NODE_54327_length_322_cov_2.226481_g46396_i0forward_frame_2 - 0.0016 17.7 1.1 0.0018 17.5 1.1 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 NODE_54327_length_322_cov_2.226481_g46396_i0forward_frame_2 - 0.12 12.4 8.0 0.3 11.1 6.9 2.1 1 1 1 2 2 2 0 Ion channel Ldt_C PF17969.1 NODE_54326_length_322_cov_2.250871_g46395_i0forward_frame_2 - 1e-26 93.4 0.4 4.7e-26 91.3 0.0 1.9 2 0 0 2 2 2 1 L,D-transpeptidase C-terminal domain Transglut_core2 PF13369.6 NODE_54326_length_322_cov_2.250871_g46395_i0forward_frame_2 - 0.12 12.0 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Transglutaminase-like superfamily TrkA_N PF02254.18 NODE_54324_length_322_cov_2.271777_g46393_i0forward_frame_2 - 7.6e-11 42.3 0.0 8.9e-11 42.1 0.0 1.1 1 0 0 1 1 1 1 TrkA-N domain Flu_NS1 PF00600.19 NODE_54323_length_322_cov_2.327526_g46392_i0forward_frame_2 - 0.096 12.2 0.2 0.11 12.0 0.2 1.1 1 0 0 1 1 1 0 Influenza non-structural protein (NS1) TT_ORF1 PF02956.14 NODE_54322_length_322_cov_2.337979_g46391_i0reverse_frame_2 - 2.1 6.9 13.9 2.1 6.9 13.9 1.0 1 0 0 1 1 1 0 TT viral orf 1 DUF3553 PF12073.8 NODE_54317_length_322_cov_2.543554_g46386_i0reverse_frame_3 - 0.19 11.5 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3553) HATPase_c PF02518.26 NODE_54317_length_322_cov_2.543554_g46386_i0reverse_frame_2 - 0.0013 19.2 0.0 0.0019 18.7 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Arylsulfotran_2 PF14269.6 NODE_54317_length_322_cov_2.543554_g46386_i0forward_frame_2 - 0.26 10.6 0.0 0.29 10.4 0.0 1.1 1 0 0 1 1 1 0 Arylsulfotransferase (ASST) COX14 PF14880.6 NODE_54316_length_322_cov_2.557491_g46385_i0reverse_frame_3 - 0.16 11.9 0.1 0.22 11.4 0.1 1.2 1 0 0 1 1 1 0 Cytochrome oxidase c assembly DUF2867 PF11066.8 NODE_54316_length_322_cov_2.557491_g46385_i0reverse_frame_2 - 0.018 15.3 0.2 0.026 14.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2867) DUF1727 PF08353.10 NODE_54316_length_322_cov_2.557491_g46385_i0forward_frame_3 - 0.095 12.6 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1727) TPP_enzyme_C PF02775.21 NODE_54316_length_322_cov_2.557491_g46385_i0forward_frame_3 - 0.1 12.4 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Exo_endo_phos_2 PF14529.6 NODE_54315_length_322_cov_2.560976_g46384_i0forward_frame_3 - 0.011 15.6 0.0 0.015 15.2 0.0 1.1 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Exo_endo_phos PF03372.23 NODE_54315_length_322_cov_2.560976_g46384_i0forward_frame_3 - 0.022 14.3 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Peptidase_U57 PF05582.12 NODE_54314_length_322_cov_2.585366_g46383_i0forward_frame_3 - 0.025 13.8 0.2 0.026 13.8 0.2 1.1 1 0 0 1 1 1 0 YabG peptidase U57 RPAP3_C PF13877.6 NODE_54314_length_322_cov_2.585366_g46383_i0forward_frame_3 - 0.06 13.9 0.1 0.082 13.5 0.1 1.3 1 0 0 1 1 1 0 Potential Monad-binding region of RPAP3 NDK PF00334.19 NODE_54314_length_322_cov_2.585366_g46383_i0forward_frame_3 - 0.12 12.3 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Nucleoside diphosphate kinase MyTH4 PF00784.17 NODE_54312_length_322_cov_2.714286_g46381_i0reverse_frame_2 - 0.83 10.2 3.1 5.1 7.6 0.4 2.1 1 1 1 2 2 2 0 MyTH4 domain RCC1_2 PF13540.6 NODE_54312_length_322_cov_2.714286_g46381_i0forward_frame_2 - 5.4e-05 22.9 0.0 0.025 14.4 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_54312_length_322_cov_2.714286_g46381_i0forward_frame_2 - 0.15 12.2 0.1 7.8 6.6 0.0 2.0 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 ChapFlgA_N PF17656.1 NODE_54310_length_322_cov_2.766551_g46379_i0reverse_frame_2 - 0.55 10.4 2.4 3.2 8.0 0.2 2.0 1 1 1 2 2 2 0 FlgA N-terminal domain HNH_2 PF13391.6 NODE_54305_length_322_cov_3.121951_g46374_i0reverse_frame_3 - 0.067 13.3 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 HNH endonuclease DUF5329 PF17263.2 NODE_54304_length_322_cov_3.184669_g46373_i0forward_frame_3 - 4.3e-32 110.2 0.0 4.8e-32 110.0 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5329) MtrH PF02007.18 NODE_54304_length_322_cov_3.184669_g46373_i0forward_frame_3 - 0.04 13.0 0.0 0.064 12.3 0.0 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase MtrH subunit TGase_elicitor PF16683.5 NODE_54298_length_322_cov_4.797909_g46367_i0forward_frame_2 - 0.058 12.2 0.0 0.072 11.8 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase elicitor YabA PF06156.13 NODE_54294_length_322_cov_37.034843_g46363_i0forward_frame_3 - 0.85 10.3 16.1 1.5 9.5 11.3 2.0 1 1 1 2 2 2 0 Initiation control protein YabA JSRP PF15312.6 NODE_54293_length_322_cov_59.285714_g46362_i0reverse_frame_2 - 0.0081 16.0 0.3 0.012 15.5 0.3 1.2 1 0 0 1 1 1 1 Junctional sarcoplasmic reticulum protein Gram_pos_anchor PF00746.21 NODE_54292_length_322_cov_64.968641_g46361_i0reverse_frame_2 - 0.6 10.1 4.8 2.8 8.0 0.4 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif CdvA PF18822.1 NODE_54291_length_322_cov_65.473868_g46360_i0forward_frame_2 - 0.024 14.5 2.0 0.19 11.6 2.0 2.0 1 1 0 1 1 1 0 CdvA-like coiled-coil domain DUF2730 PF10805.8 NODE_54291_length_322_cov_65.473868_g46360_i0forward_frame_2 - 0.064 13.4 0.2 0.083 13.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) DUF5090 PF17009.5 NODE_54288_length_322_cov_68.243902_g46357_i0reverse_frame_2 - 3.7 7.5 7.6 4.5 7.2 7.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) UCH PF00443.29 NODE_54288_length_322_cov_68.243902_g46357_i0forward_frame_2 - 0.00047 19.7 0.7 0.00063 19.3 0.0 1.5 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase DGC PF08859.11 NODE_54286_length_322_cov_72.080139_g46355_i0forward_frame_3 - 0.045 13.9 0.0 0.066 13.3 0.0 1.3 1 0 0 1 1 1 0 DGC domain Post_transc_reg PF13797.6 NODE_54286_length_322_cov_72.080139_g46355_i0forward_frame_2 - 0.083 12.8 0.7 0.15 11.9 0.7 1.5 1 1 0 1 1 1 0 Post-transcriptional regulator IBN_N PF03810.19 NODE_54285_length_322_cov_74.459930_g46354_i0reverse_frame_3 - 7.2e-07 29.0 0.2 1.1e-06 28.5 0.2 1.3 1 0 0 1 1 1 1 Importin-beta N-terminal domain RLAN PF14401.6 NODE_54279_length_322_cov_85.111498_g46348_i0reverse_frame_2 - 0.57 9.8 2.7 0.78 9.4 2.7 1.2 1 0 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain E_Pc_C PF06752.12 NODE_54278_length_322_cov_85.644599_g46347_i0forward_frame_3 - 0.044 13.9 1.0 0.05 13.7 1.0 1.0 1 0 0 1 1 1 0 Enhancer of Polycomb C-terminus Rad50_zn_hook PF04423.14 NODE_54274_length_322_cov_88.665505_g46343_i0reverse_frame_3 - 0.31 10.9 1.4 0.52 10.2 1.4 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif DcuC PF03606.15 NODE_54272_length_322_cov_100.069686_g46341_i0forward_frame_3 - 0.23 9.8 0.1 0.29 9.6 0.1 1.1 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier Humanin PF15040.6 NODE_54269_length_322_cov_120.637631_g46338_i0forward_frame_3 - 0.36 10.3 3.2 14 5.2 0.2 2.6 2 0 0 2 2 2 0 Humanin family DUF5463 PF17551.2 NODE_54269_length_322_cov_120.637631_g46338_i0forward_frame_3 - 0.93 9.5 7.3 4.1 7.4 0.3 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5463) GXGXG PF01493.19 NODE_54266_length_322_cov_138.327526_g46335_i0forward_frame_3 - 0.15 11.6 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 GXGXG motif GATA PF00320.27 NODE_54265_length_322_cov_141.233449_g46334_i0reverse_frame_2 - 0.27 10.9 0.4 0.27 10.9 0.4 2.5 2 0 0 2 2 2 0 GATA zinc finger PDR_CDR PF06422.12 NODE_54265_length_322_cov_141.233449_g46334_i0forward_frame_2 - 0.17 11.8 0.7 0.23 11.4 0.7 1.2 1 0 0 1 1 1 0 CDR ABC transporter ABC2_membrane_2 PF12679.7 NODE_54257_length_322_cov_209.982578_g46326_i0reverse_frame_2 - 0.1 11.8 0.5 0.12 11.6 0.5 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein EF-hand_1 PF00036.32 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 5.1e-06 25.7 2.8 0.017 14.6 1.1 2.4 1 1 2 3 3 3 2 EF hand EF-hand_7 PF13499.6 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.00011 22.6 3.4 0.0006 20.2 3.5 1.8 1 1 1 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.0005 20.4 0.6 0.0006 20.1 0.6 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_6 PF13405.6 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.0013 18.5 4.7 0.022 14.7 1.9 2.5 1 1 2 3 3 3 1 EF-hand domain Yop-YscD_ppl PF16693.5 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.031 13.7 0.4 0.035 13.5 0.4 1.1 1 0 0 1 1 1 0 Inner membrane component of T3SS, periplasmic domain DUF648 PF04890.13 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 0.035 13.9 0.5 0.04 13.7 0.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF648) EF-hand_5 PF13202.6 NODE_54254_length_322_cov_261.860627_g46323_i0reverse_frame_3 - 7 6.3 9.5 2 8.1 2.0 3.2 1 1 3 4 4 4 0 EF hand DUF3302 PF11742.8 NODE_54253_length_322_cov_278.080139_g46322_i0forward_frame_3 - 0.009 16.1 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3302) DUF309 PF03745.14 NODE_54249_length_322_cov_367.515679_g46318_i0reverse_frame_2 - 0.0074 16.0 0.2 0.027 14.2 0.1 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF309) PK PF00224.21 NODE_54238_length_323_cov_1.243056_g46307_i0reverse_frame_3 - 7.4e-50 169.8 4.2 8.2e-50 169.6 4.2 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain DUF2737 PF10930.8 NODE_54238_length_323_cov_1.243056_g46307_i0reverse_frame_3 - 0.035 13.7 0.2 0.075 12.6 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2737) TRH PF05438.12 NODE_54238_length_323_cov_1.243056_g46307_i0forward_frame_3 - 0.11 12.2 0.2 0.18 11.5 0.2 1.3 1 0 0 1 1 1 0 Thyrotropin-releasing hormone (TRH) Mntp PF02659.15 NODE_54238_length_323_cov_1.243056_g46307_i0forward_frame_2 - 0.015 15.0 0.6 0.015 15.0 0.6 1.2 1 0 0 1 1 1 0 Putative manganese efflux pump ECSCR PF15820.5 NODE_54238_length_323_cov_1.243056_g46307_i0forward_frame_2 - 0.097 12.5 0.2 0.12 12.2 0.2 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator TTL PF03133.15 NODE_54237_length_323_cov_1.284722_g46306_i0forward_frame_3 - 5.6e-18 65.1 0.1 6.6e-18 64.9 0.1 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_54237_length_323_cov_1.284722_g46306_i0forward_frame_3 - 0.00077 18.8 0.0 0.00086 18.6 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_54237_length_323_cov_1.284722_g46306_i0forward_frame_3 - 0.0072 15.6 0.0 0.0098 15.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp SH PF01445.17 NODE_54235_length_323_cov_1.496528_g46304_i0forward_frame_3 - 0.098 12.6 1.4 0.24 11.4 1.4 1.7 1 0 0 1 1 1 0 Viral small hydrophobic protein RNA_pol_I_A49 PF06870.12 NODE_54232_length_323_cov_1.586806_g46301_i0reverse_frame_2 - 0.35 9.7 1.1 0.37 9.6 1.1 1.1 1 0 0 1 1 1 0 A49-like RNA polymerase I associated factor ROF PF07073.12 NODE_54230_length_323_cov_1.638889_g46299_i0forward_frame_2 - 3.9e-28 97.4 0.1 5e-28 97.1 0.1 1.1 1 0 0 1 1 1 1 Modulator of Rho-dependent transcription termination (ROF) DUF3053 PF11254.8 NODE_54228_length_323_cov_1.680556_g46297_i0reverse_frame_2 - 0.034 13.7 0.3 0.051 13.1 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3053) MSSP PF03940.13 NODE_54227_length_323_cov_1.708333_g46296_i0reverse_frame_3 - 0.06 13.0 46.0 0.2 11.2 45.9 2.0 1 1 0 1 1 1 0 Male specific sperm protein Trypan_PARP PF05887.11 NODE_54227_length_323_cov_1.708333_g46296_i0reverse_frame_3 - 0.46 10.5 8.5 0.34 10.9 7.1 1.4 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) MSSP PF03940.13 NODE_54227_length_323_cov_1.708333_g46296_i0forward_frame_2 - 0.0098 15.5 12.0 0.031 13.9 12.0 1.8 1 1 0 1 1 1 1 Male specific sperm protein Opy2 PF09463.10 NODE_54222_length_323_cov_1.871528_g46291_i0reverse_frame_2 - 3.2 8.1 12.0 1.2 9.5 9.3 1.7 2 0 0 2 2 2 0 Opy2 protein SLATT_5 PF18160.1 NODE_54210_length_323_cov_2.312500_g46279_i0forward_frame_3 - 0.37 10.1 5.1 0.43 9.9 5.1 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Metallothi_Euk2 PF12809.7 NODE_54208_length_323_cov_2.343750_g46277_i0reverse_frame_3 - 0.072 13.4 0.8 0.072 13.4 0.8 1.7 2 0 0 2 2 2 0 Eukaryotic metallothionein OmdA PF13376.6 NODE_54207_length_323_cov_2.350694_g46276_i0reverse_frame_3 - 0.016 15.2 0.0 0.024 14.7 0.0 1.3 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated DUF1651 PF07864.11 NODE_54205_length_323_cov_2.378472_g46274_i0forward_frame_3 - 0.15 12.4 0.1 0.23 11.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1651) Csm4_C PF17953.1 NODE_54205_length_323_cov_2.378472_g46274_i0forward_frame_2 - 0.025 14.4 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 CRISPR Csm4 C-terminal domain UPF0370 PF13980.6 NODE_54202_length_323_cov_2.600694_g46271_i0reverse_frame_3 - 0.0027 17.7 2.0 0.19 11.8 0.2 2.2 2 0 0 2 2 2 2 Uncharacterised protein family (UPF0370) DOT1 PF08123.13 NODE_54202_length_323_cov_2.600694_g46271_i0reverse_frame_3 - 0.042 13.4 0.9 0.041 13.4 0.9 1.1 1 0 0 1 1 1 0 Histone methylation protein DOT1 Sina PF03145.16 NODE_54199_length_323_cov_2.670139_g46268_i0reverse_frame_2 - 0.082 12.8 4.0 0.096 12.6 4.0 1.1 1 0 0 1 1 1 0 Seven in absentia protein family Daxx PF03344.15 NODE_54199_length_323_cov_2.670139_g46268_i0forward_frame_3 - 0.051 13.7 0.0 0.071 13.2 0.0 1.2 1 0 0 1 1 1 0 Daxx N-terminal Rassf1C-interacting domain Endonuc_BglI PF14562.6 NODE_54198_length_323_cov_2.715278_g46267_i0reverse_frame_3 - 0.2 10.7 0.0 0.24 10.5 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease BglI Claudin_3 PF06653.11 NODE_54197_length_323_cov_2.784722_g46266_i0forward_frame_3 - 1.1 9.2 6.9 2.3 8.1 0.5 2.0 2 0 0 2 2 2 0 Tight junction protein, Claudin-like DUF3139 PF11337.8 NODE_54197_length_323_cov_2.784722_g46266_i0forward_frame_3 - 6.8 7.4 12.2 6.1 7.6 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF4077 PF13295.6 NODE_54194_length_323_cov_3.784722_g46263_i0forward_frame_3 - 0.049 13.6 8.3 0.053 13.5 8.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) Xlink PF00193.17 NODE_54191_length_323_cov_4.166667_g46260_i0forward_frame_3 - 0.013 15.9 0.5 0.019 15.4 0.5 1.2 1 0 0 1 1 1 0 Extracellular link domain ATP-synt_8 PF00895.20 NODE_54190_length_323_cov_4.375000_g46259_i0forward_frame_3 - 0.11 13.0 2.9 0.13 12.7 1.1 2.0 2 1 0 2 2 2 0 ATP synthase protein 8 TRAF_BIRC3_bd PF16673.5 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.012 15.4 0.9 0.019 14.7 0.9 1.3 1 0 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain SPATA1_C PF15743.5 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.02 14.9 0.2 0.027 14.5 0.2 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus Rx_N PF18052.1 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.027 14.7 0.4 0.035 14.4 0.4 1.2 1 0 0 1 1 1 0 Rx N-terminal domain BRE1 PF08647.11 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.029 14.4 0.8 0.039 14.0 0.8 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase Spc24 PF08286.11 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.033 14.4 0.2 0.04 14.2 0.2 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 CENP-F_N PF10481.9 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.064 12.9 0.4 0.074 12.7 0.4 1.0 1 0 0 1 1 1 0 Cenp-F N-terminal domain ECM11 PF15463.6 NODE_54186_length_323_cov_41.586806_g46255_i0reverse_frame_3 - 0.11 13.1 0.2 0.13 12.8 0.2 1.1 1 0 0 1 1 1 0 Extracellular mutant protein 11 Ketoacyl-synt_C PF02801.22 NODE_54180_length_323_cov_62.375000_g46249_i0reverse_frame_3 - 0.00048 20.1 0.3 0.00079 19.4 0.3 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain Toxin_2 PF00451.19 NODE_54175_length_323_cov_65.666667_g46244_i0forward_frame_2 - 0.037 14.3 1.2 0.037 14.3 1.2 2.1 1 1 1 2 2 2 0 Scorpion short toxin, BmKK2 zf-C2H2_10 PF16588.5 NODE_54172_length_323_cov_72.659722_g46241_i0reverse_frame_3 - 0.22 11.3 0.7 0.22 11.3 0.7 3.0 4 0 0 4 4 4 0 C2H2 zinc-finger HHA PF05321.11 NODE_54171_length_323_cov_74.635417_g46240_i0reverse_frame_2 - 0.11 12.8 0.1 0.17 12.2 0.1 1.3 1 0 0 1 1 1 0 Haemolysin expression modulating protein RNA_polI_A34 PF08208.11 NODE_54166_length_323_cov_82.656250_g46235_i0forward_frame_3 - 0.00087 19.4 15.8 0.0011 19.1 15.8 1.1 1 0 0 1 1 1 1 DNA-directed RNA polymerase I subunit RPA34.5 Dsh_C PF12316.8 NODE_54166_length_323_cov_82.656250_g46235_i0forward_frame_3 - 0.06 13.7 12.9 0.094 13.1 12.9 1.3 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal RNA_pol_Rpc4 PF05132.14 NODE_54166_length_323_cov_82.656250_g46235_i0forward_frame_3 - 0.13 12.7 4.3 0.15 12.5 4.3 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 IMUP PF15761.5 NODE_54166_length_323_cov_82.656250_g46235_i0forward_frame_3 - 0.44 11.3 21.4 0.56 10.9 21.4 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF4604 PF15377.6 NODE_54166_length_323_cov_82.656250_g46235_i0forward_frame_3 - 3.2 8.2 19.0 3.8 7.9 19.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) Med19 PF10278.9 NODE_54166_length_323_cov_82.656250_g46235_i0forward_frame_3 - 3.5 7.5 19.1 4.2 7.3 19.1 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 SWIRM-assoc_2 PF16496.5 NODE_54166_length_323_cov_82.656250_g46235_i0forward_frame_3 - 7.2 5.4 18.1 8.9 5.1 18.1 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal zf-C6H2 PF15801.5 NODE_54165_length_323_cov_84.736111_g46234_i0forward_frame_2 - 0.25 11.7 2.6 0.46 10.8 2.6 1.5 1 1 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding FLYWCH PF04500.16 NODE_54164_length_323_cov_92.333333_g46233_i0reverse_frame_2 - 0.011 15.8 1.0 2.1 8.5 0.1 2.2 2 0 0 2 2 2 0 FLYWCH zinc finger domain DUF4777 PF16007.5 NODE_54161_length_323_cov_100.104167_g46230_i0reverse_frame_2 - 0.0031 17.7 0.1 0.021 15.1 0.1 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4777) DUF674 PF05056.12 NODE_54158_length_323_cov_121.604167_g46227_i0forward_frame_3 - 0.053 12.4 0.3 0.06 12.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) FeS_assembly_P PF01883.19 NODE_54157_length_323_cov_122.732639_g46226_i0reverse_frame_3 - 0.1 12.8 0.0 0.22 11.7 0.0 1.5 2 0 0 2 2 2 0 Iron-sulfur cluster assembly protein Hydin_ADK PF17213.3 NODE_54157_length_323_cov_122.732639_g46226_i0forward_frame_2 - 0.085 13.1 0.4 0.078 13.3 0.4 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain Rieske PF00355.26 NODE_54155_length_323_cov_129.968750_g46224_i0reverse_frame_2 - 0.032 14.1 0.9 0.042 13.8 0.9 1.3 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain BtrH_N PF14399.6 NODE_54153_length_323_cov_139.135417_g46222_i0reverse_frame_2 - 0.13 12.5 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal Pestivirus_E2 PF16329.5 NODE_54153_length_323_cov_139.135417_g46222_i0forward_frame_3 - 0.0066 15.3 0.2 0.0066 15.3 0.2 1.1 1 0 0 1 1 1 1 Pestivirus envelope glycoprotein E2 DHFR_2 PF06442.11 NODE_54150_length_323_cov_183.538194_g46219_i0forward_frame_3 - 0.19 11.6 0.6 0.45 10.4 0.3 1.9 1 1 1 2 2 2 0 R67 dihydrofolate reductase Ras PF00071.22 NODE_54147_length_323_cov_205.461806_g46216_i0reverse_frame_2 - 3e-17 62.7 0.2 4.1e-17 62.3 0.2 1.2 1 0 0 1 1 1 1 Ras family IL3Ra_N PF18611.1 NODE_54147_length_323_cov_205.461806_g46216_i0forward_frame_3 - 0.02 14.9 0.1 0.031 14.3 0.1 1.3 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain CTP_transf_1 PF01148.20 NODE_54146_length_323_cov_211.388889_g46215_i0forward_frame_3 - 0.075 12.8 5.5 0.086 12.6 5.5 1.0 1 0 0 1 1 1 0 Cytidylyltransferase family Fanconi_A PF03511.14 NODE_54146_length_323_cov_211.388889_g46215_i0forward_frame_3 - 8.5 6.4 11.0 3.2 7.7 0.9 2.4 2 1 0 2 2 2 0 Fanconi anaemia group A protein Cren7 PF11520.8 NODE_54146_length_323_cov_211.388889_g46215_i0forward_frame_2 - 0.051 13.5 0.0 12 5.9 0.0 2.1 2 0 0 2 2 2 0 Chromatin protein Cren7 PAE PF03283.13 NODE_54144_length_323_cov_420.475694_g46213_i0reverse_frame_2 - 0.075 12.1 0.1 0.075 12.1 0.1 1.1 1 0 0 1 1 1 0 Pectinacetylesterase HC2 PF07382.11 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_3 - 3.6 7.6 13.9 0.38 10.8 2.5 2.8 1 1 2 3 3 3 0 Histone H1-like nucleoprotein HC2 DUF374 PF04028.13 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.014 14.9 1.1 3 7.5 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF374) Mg_chelatase_C PF13335.6 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.048 14.3 0.4 13 6.5 0.1 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI C-terminal OCC1 PF15506.6 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.051 13.7 1.3 10 6.4 0.1 2.3 2 0 0 2 2 2 0 OCC1 family DUF782 PF05614.11 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.058 13.8 0.9 43 4.6 0.0 3.2 3 0 0 3 3 3 0 Circovirus protein of unknown function (DUF782) LPD23 PF18838.1 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.26 11.1 1.8 14 5.6 0.1 2.1 2 0 0 2 2 2 0 Large polyvalent protein associated domain 23 SCAB-PH PF17684.1 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.27 11.5 3.1 1.6 9.0 0.1 2.8 1 1 2 3 3 3 0 PH domain of plant-specific actin-binding protein zf_C2H2_13 PF18508.1 NODE_54143_length_323_cov_571.097222_g46212_i0reverse_frame_2 - 0.3 10.7 1.2 70 3.1 0.0 3.0 3 0 0 3 3 3 0 Zinc finger domain IL3 PF02059.15 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_3 - 0.064 13.3 0.5 11 6.1 0.0 2.1 2 0 0 2 2 2 0 Interleukin-3 ATXN-1_C PF12547.8 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_3 - 0.088 13.1 2.0 8.8 6.8 0.0 3.2 3 0 0 3 3 3 0 Capicua transcriptional repressor modulator DUF3270 PF11674.8 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_3 - 1.7 8.9 6.3 7.4 6.8 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) Flag1_repress PF03614.13 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.00059 19.7 0.0 0.33 10.7 0.0 2.1 2 0 0 2 2 2 2 Repressor of phase-1 flagellin zf-C3Hc3H PF13891.6 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.0039 17.5 0.7 2.8 8.4 0.1 2.3 1 1 1 2 2 2 2 Potential DNA-binding domain BRX_assoc PF16627.5 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.029 14.5 0.0 8.7 6.6 0.0 2.3 2 0 0 2 2 2 0 Unstructured region between BRX_N and BRX domain CxC6 PF18721.1 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.056 13.7 2.3 5.6 7.3 0.3 2.2 1 1 1 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases DUF1072 PF06380.11 NODE_54143_length_323_cov_571.097222_g46212_i0forward_frame_2 - 0.55 10.1 5.3 8.9 6.3 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) DUF2975 PF11188.8 NODE_54142_length_323_cov_574.809028_g46211_i0reverse_frame_2 - 0.69 9.8 20.0 0.85 9.5 20.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) zf-RING_4 PF14570.6 NODE_54141_length_323_cov_659.871528_g46210_i0forward_frame_2 - 3.3 7.6 15.1 2.2 8.1 8.0 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain HTH_54 PF18607.1 NODE_54138_length_323_cov_6261.593750_g46208_i0reverse_frame_3 - 0.031 14.4 0.0 0.043 13.9 0.0 1.1 1 0 0 1 1 1 0 ParA helix turn helix domain VIT1 PF01988.19 NODE_54137_length_324_cov_1.273356_g46207_i0forward_frame_3 - 0.034 14.0 0.0 0.035 14.0 0.0 1.1 1 0 0 1 1 1 0 VIT family HJURP_mid PF12346.8 NODE_54136_length_324_cov_1.328720_g46206_i0reverse_frame_2 - 0.13 12.8 3.3 0.15 12.5 3.3 1.2 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat KorB PF08535.10 NODE_54132_length_324_cov_1.487889_g46202_i0reverse_frame_2 - 0.018 15.1 0.0 0.037 14.1 0.0 1.5 1 1 0 1 1 1 0 KorB domain DUF4637 PF15470.6 NODE_54132_length_324_cov_1.487889_g46202_i0forward_frame_2 - 0.94 9.2 3.3 1.2 8.8 3.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Anemone_cytotox PF06369.12 NODE_54129_length_324_cov_1.719723_g46199_i0forward_frame_3 - 0.025 14.2 0.0 0.03 13.9 0.0 1.1 1 0 0 1 1 1 0 Sea anemone cytotoxic protein CxC1 PF18802.1 NODE_54125_length_324_cov_1.844291_g46195_i0forward_frame_3 - 0.75 10.0 3.6 0.66 10.1 1.5 1.9 1 1 1 2 2 2 0 CxC1 like cysteine cluster associated with KDZ transposases Pentapeptide_4 PF13599.6 NODE_54124_length_324_cov_1.882353_g46194_i0reverse_frame_2 - 0.11 12.6 0.8 0.36 11.0 0.7 1.8 1 1 1 2 2 2 0 Pentapeptide repeats (9 copies) Hairy_orange PF07527.13 NODE_54122_length_324_cov_1.937716_g46192_i0forward_frame_2 - 0.043 14.0 1.5 0.1 12.8 0.8 1.9 1 1 1 2 2 2 0 Hairy Orange HTH_40 PF14493.6 NODE_54119_length_324_cov_1.989619_g46189_i0forward_frame_2 - 0.037 14.5 0.4 0.05 14.1 0.4 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-C2H2 PF00096.26 NODE_54116_length_324_cov_2.193772_g46186_i0forward_frame_2 - 0.36 11.4 1.7 0.48 11.0 0.4 2.0 2 0 0 2 2 2 0 Zinc finger, C2H2 type OstA PF03968.14 NODE_54112_length_324_cov_2.404844_g46182_i0forward_frame_2 - 0.14 12.4 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 OstA-like protein CUB_2 PF02408.20 NODE_54110_length_324_cov_2.515571_g46180_i0reverse_frame_2 - 0.024 14.4 0.1 0.028 14.2 0.1 1.2 1 0 0 1 1 1 0 CUB-like domain Nsp2a_N PF17896.1 NODE_54108_length_324_cov_2.598616_g46178_i0reverse_frame_2 - 0.29 10.3 0.2 0.36 10.0 0.2 1.1 1 0 0 1 1 1 0 Replicase polyprotein 1a N-terminal domain GGDEF PF00990.21 NODE_54108_length_324_cov_2.598616_g46178_i0forward_frame_2 - 2.4e-26 92.4 0.0 2.6e-26 92.3 0.0 1.0 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain zf-CGNR PF11706.8 NODE_54105_length_324_cov_2.757785_g46175_i0forward_frame_2 - 0.55 10.1 0.0 0.55 10.1 0.0 2.5 2 1 0 2 2 2 0 CGNR zinc finger Ran_BP1 PF00638.18 NODE_54104_length_324_cov_2.840830_g46174_i0forward_frame_2 - 0.096 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 RanBP1 domain Beta-lactamase PF00144.24 NODE_54096_length_324_cov_3.608997_g46166_i0reverse_frame_3 - 7.8e-09 35.2 0.1 8.2e-09 35.1 0.1 1.0 1 0 0 1 1 1 1 Beta-lactamase tRNA-synt_2d PF01409.20 NODE_54095_length_324_cov_4.391003_g46165_i0reverse_frame_3 - 0.0033 16.9 0.1 0.0039 16.7 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) KIX_2 PF16987.5 NODE_54095_length_324_cov_4.391003_g46165_i0reverse_frame_3 - 0.04 13.9 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 KIX domain DUF2842 PF11003.8 NODE_54090_length_324_cov_54.567474_g46160_i0reverse_frame_3 - 0.22 11.8 2.6 0.33 11.2 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2842) DUF3657 PF12394.8 NODE_54090_length_324_cov_54.567474_g46160_i0reverse_frame_2 - 6.9e-06 26.5 0.2 1.1e-05 25.8 0.2 1.4 1 0 0 1 1 1 1 Protein FAM135 RolB_RolC PF02027.17 NODE_54087_length_324_cov_63.564014_g46157_i0forward_frame_2 - 0.018 14.7 0.0 0.021 14.5 0.0 1.1 1 0 0 1 1 1 0 RolB/RolC glucosidase family LCE PF14672.6 NODE_54082_length_324_cov_73.536332_g46152_i0reverse_frame_3 - 0.072 13.7 5.6 0.12 13.0 5.6 1.6 1 1 0 1 1 1 0 Late cornified envelope DUF4476 PF14771.6 NODE_54081_length_324_cov_76.608997_g46151_i0forward_frame_2 - 0.057 13.7 2.7 0.22 11.8 0.6 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4476) Glyco_hydro_31 PF01055.26 NODE_54078_length_324_cov_86.415225_g46148_i0reverse_frame_2 - 4.5e-15 55.8 0.3 5.2e-15 55.6 0.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Sprouty PF05210.13 NODE_54078_length_324_cov_86.415225_g46148_i0forward_frame_3 - 0.27 11.7 3.2 0.37 11.2 3.2 1.2 1 0 0 1 1 1 0 Sprouty protein (Spry) zn-ribbon_14 PF16503.5 NODE_54073_length_324_cov_98.044983_g46143_i0reverse_frame_3 - 0.01 15.3 0.1 0.023 14.2 0.1 1.6 1 0 0 1 1 1 0 Zinc-ribbon TPR_1 PF00515.28 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 4e-20 70.7 2.1 1.3e-07 31.2 0.2 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 3.6e-15 54.8 0.2 9e-05 22.3 0.1 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 1.1e-13 50.6 2.6 7.2e-06 25.6 0.0 3.1 1 1 2 3 3 3 3 TPR repeat TPR_17 PF13431.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 4.8e-12 45.4 0.2 9.8e-06 25.6 0.1 2.6 3 0 0 3 3 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 2.2e-11 43.0 0.8 0.00042 20.3 0.1 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 7.9e-08 32.8 0.0 2.9e-05 24.6 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 9.1e-07 29.1 0.3 0.00043 20.5 0.1 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 2.5e-06 27.1 0.5 0.017 15.1 0.0 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 3.7e-06 27.0 0.0 0.00023 21.3 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 1.1e-05 25.7 0.0 0.063 13.9 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_5 PF12688.7 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.0085 16.3 0.0 0.018 15.3 0.0 1.6 2 0 0 2 2 2 1 Tetratrico peptide repeat Ubiq-assoc PF09145.10 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.021 14.8 0.2 1.1 9.3 0.0 2.5 2 0 0 2 2 2 0 Ubiquitin-associated TPR_19 PF14559.6 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.051 14.1 0.0 0.83 10.2 0.0 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat DBD_Tnp_Mut PF03108.15 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.059 13.4 0.0 2.6 8.1 0.0 2.2 2 0 0 2 2 2 0 MuDR family transposase NTPase_1 PF03266.15 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.09 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 NTPase SHNi-TPR PF10516.9 NODE_54073_length_324_cov_98.044983_g46143_i0forward_frame_3 - 0.28 10.7 1.6 3.5 7.2 0.1 3.1 3 1 0 3 3 3 0 SHNi-TPR DUF1088 PF06469.11 NODE_54071_length_324_cov_104.103806_g46141_i0reverse_frame_3 - 0.17 11.6 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1088) Arm PF00514.23 NODE_54071_length_324_cov_104.103806_g46141_i0forward_frame_3 - 0.0013 18.7 0.1 0.0023 17.9 0.1 1.4 1 0 0 1 1 1 1 Armadillo/beta-catenin-like repeat Presenilin PF01080.17 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_3 - 1.3 7.7 8.7 1.3 7.7 8.7 1.0 1 0 0 1 1 1 0 Presenilin RNA_pol_Rpc4 PF05132.14 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_3 - 5.4 7.4 12.8 5.9 7.3 12.8 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 UPF0565 PF10561.9 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_2 - 0.73 9.0 7.7 0.87 8.7 7.7 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 DUF4337 PF14235.6 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_2 - 7.2 6.7 23.3 8.1 6.5 23.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DDHD PF02862.17 NODE_54070_length_324_cov_109.674740_g46140_i0forward_frame_2 - 10 6.2 11.8 11 6.1 11.8 1.1 1 0 0 1 1 1 0 DDHD domain CARM1 PF11531.8 NODE_54069_length_324_cov_125.031142_g46139_i0reverse_frame_3 - 0.041 14.0 0.1 0.053 13.7 0.1 1.2 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal NCOA_u2 PF16665.5 NODE_54069_length_324_cov_125.031142_g46139_i0forward_frame_2 - 0.011 16.1 0.5 0.015 15.6 0.5 1.2 1 0 0 1 1 1 0 Unstructured region on nuclear receptor coactivator protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks248.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks248.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks248.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks248.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cas_NE0113 PF09623.10 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_3 - 0.012 15.3 0.1 0.014 15.1 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) UCH PF00443.29 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_2 - 3.4e-15 56.2 1.6 3.7e-15 56.1 1.6 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_2 - 0.0051 16.5 0.1 0.0059 16.2 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase TMEM173 PF15009.6 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_2 - 0.036 13.2 0.1 0.046 12.9 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 173 Orexin PF02072.15 NODE_54067_length_324_cov_127.356401_g46137_i0forward_frame_2 - 0.088 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Prepro-orexin Hid1 PF12722.7 NODE_54064_length_324_cov_135.885813_g46134_i0reverse_frame_2 - 1.2 7.2 8.6 1.4 6.9 8.6 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Nop14 PF04147.12 NODE_54064_length_324_cov_135.885813_g46134_i0reverse_frame_2 - 3.6 5.7 17.2 3.9 5.6 17.2 1.0 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_54064_length_324_cov_135.885813_g46134_i0reverse_frame_2 - 8.8 4.5 12.3 9.1 4.4 12.3 1.0 1 0 0 1 1 1 0 CDC45-like protein ANKH PF07260.11 NODE_54057_length_324_cov_185.667820_g46127_i0forward_frame_3 - 0.077 12.2 0.0 0.098 11.8 0.0 1.0 1 0 0 1 1 1 0 Progressive ankylosis protein (ANKH) Astro_capsid_N PF03115.14 NODE_54054_length_324_cov_228.093426_g46124_i0forward_frame_2 - 0.015 14.0 0.4 0.017 13.8 0.4 1.0 1 0 0 1 1 1 0 Astrovirus capsid protein precursor Nodulin_late PF07127.11 NODE_54052_length_324_cov_244.664360_g46122_i0reverse_frame_2 - 0.1 13.0 0.3 0.2 12.0 0.3 1.5 1 0 0 1 1 1 0 Late nodulin protein Colicin_E5 PF12106.8 NODE_54045_length_324_cov_6142.958478_g46115_i0forward_frame_2 - 0.087 13.1 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 Colicin E5 ribonuclease domain TAXi_C PF14541.6 ORF99979 - 3.7e-07 30.1 0.0 4.7e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal DUF3746 PF12562.8 ORF97778 - 0.0048 16.8 0.1 0.0095 15.8 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3746) Zn-ribbon_8 PF09723.10 ORF97483 - 0.0091 16.1 3.4 0.019 15.1 0.3 2.3 2 0 0 2 2 2 1 Zinc ribbon domain Neurensin PF14927.6 ORF97483 - 0.13 12.0 2.6 13 5.4 0.4 2.9 1 1 1 2 2 2 0 Neurensin PDR_assoc PF08370.11 ORF97253 - 4 7.3 5.5 1.8 8.4 3.1 1.7 2 0 0 2 2 2 0 Plant PDR ABC transporter associated LRAT PF04970.13 ORF96505 - 0.0024 18.1 0.0 0.0028 18.0 0.0 1.2 1 0 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 ORF96505 - 0.055 13.3 0.1 0.062 13.1 0.1 1.3 1 1 0 1 1 1 0 PPPDE putative peptidase domain LIFR_N PF18207.1 ORF95624 - 0.13 12.6 0.7 0.2 12.0 0.7 1.3 1 0 0 1 1 1 0 Leukemia inhibitory factor receptor N-terminal domain Peptidase_C71 PF12386.8 ORF93398 - 0.14 11.8 5.6 0.17 11.5 5.6 1.1 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei DUF5465 PF17553.2 ORF927 - 0.012 15.9 1.9 2.2 9.0 0.6 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5465) Cucumopine_C PF18631.1 ORF91894 - 0.17 11.8 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain HATPase_c PF02518.26 ORF9115 - 5.5e-19 68.7 0.0 6.2e-19 68.6 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF9115 - 0.00046 20.1 0.0 0.0006 19.8 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 ORF9115 - 0.053 13.4 0.0 0.11 12.3 0.0 1.6 1 1 1 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Neurexophilin PF06312.12 ORF9115 - 0.22 10.9 0.0 0.3 10.5 0.0 1.2 1 0 0 1 1 1 0 Neurexophilin EnY2 PF10163.9 ORF90679 - 3.5e-29 101.0 1.4 4.2e-29 100.8 1.4 1.1 1 0 0 1 1 1 1 Transcription factor e(y)2 RPA_interact_N PF14766.6 ORF90679 - 0.078 12.6 1.1 0.17 11.5 1.1 1.7 1 0 0 1 1 1 0 Replication protein A interacting N-terminal Dynein_light PF01221.18 ORF90634 - 8.1e-23 80.5 0.1 9.5e-23 80.3 0.1 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 Pollen_allerg_1 PF01357.21 ORF90634 - 0.062 13.3 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Pollen allergen DUF4083 PF13314.6 ORF89900 - 0.19 11.7 5.1 0.39 10.7 5.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) HSM3_C PF18794.1 ORF89126 - 0.023 14.3 0.5 0.026 14.1 0.5 1.0 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain SPP PF06550.11 ORF87204 - 0.07 12.6 0.1 0.077 12.4 0.1 1.1 1 0 0 1 1 1 0 Signal-peptide peptidase, presenilin aspartyl protease dCMP_cyt_deam_1 PF00383.23 ORF8638 - 0.37 10.7 6.3 0.086 12.7 2.3 2.0 1 1 1 2 2 2 0 Cytidine and deoxycytidylate deaminase zinc-binding region DUF192 PF02643.15 ORF86242 - 0.025 14.7 4.3 5.8 7.1 0.2 3.0 1 1 2 3 3 3 0 Uncharacterized ACR, COG1430 Bac_small_YrzI PF09501.10 ORF86242 - 2.1 8.5 6.3 16 5.7 0.2 3.0 3 0 0 3 3 3 0 Probable sporulation protein (Bac_small_yrzI) DUF2614 PF11023.8 ORF86242 - 3.1 7.9 7.9 1.6 8.9 2.1 2.4 2 1 1 3 3 3 0 Zinc-ribbon containing domain PH_BEACH PF14844.6 ORF85935 - 0.036 14.2 0.2 0.05 13.7 0.2 1.3 1 0 0 1 1 1 0 PH domain associated with Beige/BEACH Spec3 PF15795.5 ORF85390 - 1.7e-11 44.5 19.4 1.5e-09 38.2 19.4 2.1 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein Acyl_transf_3 PF01757.22 ORF85390 - 0.0032 16.6 0.1 0.0034 16.5 0.1 1.0 1 0 0 1 1 1 1 Acyltransferase family Toxin_5 PF05294.13 ORF85390 - 0.063 13.7 1.1 0.093 13.2 1.1 1.3 1 0 0 1 1 1 0 Scorpion short toxin Plasmodium_HRP PF05403.11 ORF84980 - 0.023 14.5 2.5 0.029 14.2 2.5 1.1 1 0 0 1 1 1 0 Plasmodium histidine-rich protein (HRPII/III) Aminotran_5 PF00266.19 ORF84980 - 0.16 10.9 3.2 0.19 10.7 3.2 1.0 1 0 0 1 1 1 0 Aminotransferase class-V hnRNP_Q_AcD PF18360.1 ORF84980 - 0.49 10.4 5.0 2.5 8.1 0.6 2.6 1 1 2 3 3 3 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain MAT1 PF06391.13 ORF84980 - 3.5 7.4 5.9 4.3 7.1 5.9 1.1 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 DUF4375 PF14300.6 ORF84980 - 4.3 7.6 7.5 14 6.0 3.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) Abhydro_lipase PF04083.16 ORF84870 - 8e-10 38.2 0.0 1.1e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region DUF4633 PF15464.6 ORF84184 - 0.4 10.9 3.6 6.5 6.9 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4633) Oest_recep PF02159.15 ORF83431 - 0.13 12.7 0.1 0.16 12.4 0.1 1.2 1 0 0 1 1 1 0 Oestrogen receptor GDP_Man_Dehyd PF16363.5 ORF82467 - 0.11 11.9 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase CARM1 PF11531.8 ORF81631 - 0.077 13.2 1.3 0.12 12.6 1.3 1.3 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal Robl_LC7 PF03259.17 ORF81335 - 4.5e-15 55.2 0.0 5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain Lung_7-TM_R PF06814.13 ORF80954 - 0.021 14.1 5.2 0.024 13.9 5.2 1.1 1 0 0 1 1 1 0 Lung seven transmembrane receptor EF-hand_1 PF00036.32 ORF80401 - 6.7e-14 50.3 0.1 6.4e-06 25.4 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF80401 - 6.1e-12 44.5 0.2 5.3e-05 22.8 0.0 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF80401 - 4.4e-11 43.1 0.0 6.1e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF80401 - 1.3e-10 40.3 0.1 7.6e-05 22.0 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF80401 - 3.5e-08 33.2 0.6 4.5e-06 26.4 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair DUF674 PF05056.12 ORF80401 - 0.031 13.2 0.3 0.032 13.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) EF-hand_4 PF12763.7 ORF80401 - 0.041 13.8 1.3 0.33 10.9 0.1 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Cdc6_C PF09079.11 ORF80401 - 0.12 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain CRIC_ras_sig PF10534.9 ORF79861 - 0.068 13.3 0.1 0.088 13.0 0.1 1.2 1 0 0 1 1 1 0 Connector enhancer of kinase suppressor of ras NYAP_N PF15439.6 ORF79861 - 0.5 9.5 5.8 0.5 9.5 5.8 1.1 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter TPR_10 PF13374.6 ORF79227 - 0.043 13.7 0.0 0.093 12.6 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat UQ_con PF00179.26 ORF79161 - 1.2e-18 67.1 0.0 1.5e-18 66.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme T2SSppdC PF12528.8 ORF7829 - 4e-25 88.4 4.3 5.1e-25 88.0 4.3 1.1 1 0 0 1 1 1 1 Type II secretion prepilin peptidase dependent protein C N_methyl PF07963.12 ORF7829 - 5.7e-07 28.8 0.4 1.1e-06 27.9 0.4 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif DUF1494 PF07379.11 ORF7829 - 0.025 14.4 0.0 0.033 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1494) Coa1 PF08695.10 ORF7829 - 0.061 13.1 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 Apelin PF15360.6 ORF77316 - 0.82 10.3 6.2 0.25 11.9 3.4 1.7 1 1 0 1 1 1 0 APJ endogenous ligand T4_deiodinase PF00837.17 ORF77083 - 0.19 11.0 0.0 0.22 10.8 0.0 1.1 1 0 0 1 1 1 0 Iodothyronine deiodinase Kinesin PF00225.23 ORF77033 - 1.8e-09 37.0 0.0 1.8e-09 37.0 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF77033 - 1.8e-07 31.2 0.2 1.8e-07 31.2 0.2 1.1 1 0 0 1 1 1 1 Microtubule binding Claudin_2 PF13903.6 ORF75067 - 0.0012 18.7 1.9 0.0014 18.4 1.9 1.1 1 0 0 1 1 1 1 PMP-22/EMP/MP20/Claudin tight junction Thioredoxin_2 PF13098.6 ORF74826 - 0.031 14.7 0.0 0.051 14.0 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain GTF2I PF02946.14 ORF74826 - 0.031 14.3 0.0 1.3 9.2 0.0 2.7 2 1 1 3 3 3 0 GTF2I-like repeat Rota_NSP4 PF01452.16 ORF74689 - 0.13 11.9 0.2 0.19 11.4 0.2 1.3 1 0 0 1 1 1 0 Rotavirus non structural protein CENP-T_C PF15511.6 ORF74395 - 8.4e-09 35.5 0.1 1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF74395 - 3.5e-05 24.0 0.1 0.0001 22.5 0.0 1.8 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF74395 - 3.9e-05 23.7 0.1 5.7e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 ORF74395 - 7.1e-05 23.1 0.1 0.0001 22.6 0.1 1.4 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 ORF74395 - 0.00042 20.7 0.1 0.00051 20.4 0.1 1.2 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 ORF74395 - 0.0066 16.5 0.0 0.0086 16.1 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF74395 - 0.16 12.5 0.1 0.23 12.0 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A DUF1298 PF06974.13 ORF73409 - 4.7e-05 23.4 0.1 5.1e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Herpes_UL95 PF03038.14 ORF73409 - 0.056 12.6 0.3 0.057 12.6 0.3 1.0 1 0 0 1 1 1 0 UL95 family ProRS-C_1 PF09180.11 ORF73140 - 8.2e-20 70.8 0.1 1e-19 70.5 0.1 1.1 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal Peptidase_M16_C PF05193.21 ORF73140 - 0.0097 15.9 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase M16 inactive domain LMSTEN PF07988.12 ORF73140 - 0.013 14.9 0.2 0.036 13.6 0.0 1.8 2 0 0 2 2 2 0 LMSTEN motif zf-BED PF02892.15 ORF72824 - 0.069 13.2 3.4 0.092 12.8 1.2 2.3 2 0 0 2 2 2 0 BED zinc finger APG6_N PF17675.1 ORF72733 - 0.0074 16.8 1.5 0.028 15.0 0.4 1.9 2 0 0 2 2 2 1 Apg6 coiled-coil region GGA_N-GAT PF18308.1 ORF72733 - 0.015 14.9 0.3 0.034 13.8 0.3 1.6 1 0 0 1 1 1 0 GGA N-GAT domain DUF327 PF03885.13 ORF72733 - 0.016 15.2 0.2 0.024 14.6 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF327) Fez1 PF06818.15 ORF72733 - 0.024 15.1 1.1 0.031 14.7 1.1 1.2 1 0 0 1 1 1 0 Fez1 Latarcin PF10279.9 ORF72733 - 0.03 14.7 0.4 0.32 11.4 0.2 2.0 2 0 0 2 2 2 0 Latarcin precursor DUF3502 PF12010.8 ORF72733 - 0.071 13.8 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3502) DUF4315 PF14193.6 ORF72733 - 0.082 12.9 0.8 0.082 12.9 0.8 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4315) DivIC PF04977.15 ORF72733 - 0.19 11.5 3.9 1.1 9.0 1.0 2.7 2 1 0 2 2 2 0 Septum formation initiator DAO PF01266.24 ORF71544 - 2.4e-05 24.1 0.0 2.8e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase DUF5496 PF17600.2 ORF71544 - 0.03 14.4 0.1 0.044 13.8 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5496) TraD_N PF12615.8 ORF70135 - 0.078 13.7 0.2 0.092 13.5 0.2 1.1 1 0 0 1 1 1 0 F sex factor protein N terminal DUF3254 PF11630.8 ORF69302 - 0.17 12.0 2.5 0.61 10.3 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3254) Nop10p PF04135.12 ORF6918 - 0.03 14.4 0.0 0.07 13.2 0.0 1.6 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family FaeA PF04703.12 ORF68671 - 0.14 12.5 0.3 12 6.4 0.0 2.9 3 0 0 3 3 3 0 FaeA-like protein Antimicrobial_5 PF08026.11 ORF68671 - 0.33 11.0 2.5 18 5.5 0.2 3.0 3 0 0 3 3 3 0 Bee antimicrobial peptide RCC1 PF00415.18 ORF68671 - 1 10.0 4.0 24 5.6 0.2 2.7 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat zf-RING_13 PF17977.1 ORF68671 - 1.1 9.5 20.8 5.4 7.2 3.2 3.1 1 1 2 3 3 3 0 RING/Ubox like zinc-binding domain zf_UBZ PF18439.1 ORF68370 - 0.042 13.4 0.4 0.076 12.6 0.4 1.4 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger DUF4020 PF13212.6 ORF6797 - 0.093 12.6 0.2 0.095 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4020) SLATT_3 PF18184.1 ORF67461 - 0.31 11.2 0.7 0.5 10.5 0.1 1.6 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 3 DUF1461 PF07314.11 ORF66977 - 0.0051 16.7 0.1 0.0058 16.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1461) Baculo_11_kDa PF06143.11 ORF66819 - 0.13 11.9 0.2 0.37 10.4 0.0 1.8 1 1 0 2 2 2 0 Baculovirus 11 kDa family EpsG PF14897.6 ORF66571 - 0.003 16.9 1.0 0.0033 16.8 1.0 1.0 1 0 0 1 1 1 1 EpsG family DAGAT PF03982.13 ORF65573 - 3.6e-12 45.8 0.0 3.6e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 Diacylglycerol acyltransferase DUF2273 PF10031.9 ORF65390 - 0.012 15.7 1.2 0.02 14.9 1.2 1.3 1 0 0 1 1 1 0 Small integral membrane protein (DUF2273) DUF3899 PF13038.6 ORF65390 - 0.012 16.0 0.4 0.017 15.6 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3899) Reo_P9 PF06043.11 ORF65390 - 0.023 14.1 0.2 0.024 14.1 0.2 1.1 1 0 0 1 1 1 0 Reovirus P9-like family LRRC37AB_C PF14914.6 ORF65390 - 0.073 13.0 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain ETRAMP PF09716.10 ORF65390 - 0.14 12.2 0.7 0.17 11.9 0.7 1.4 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Cytochrom_C_asm PF01578.20 ORF64620 - 0.0024 17.6 0.0 0.0027 17.5 0.0 1.0 1 0 0 1 1 1 1 Cytochrome C assembly protein YajC PF02699.15 ORF64620 - 0.037 13.9 1.1 0.13 12.1 0.2 2.1 2 1 0 2 2 2 0 Preprotein translocase subunit 7tm_1 PF00001.21 ORF64620 - 0.15 11.4 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) PDR_CDR PF06422.12 ORF64620 - 2 8.3 3.5 0.84 9.6 0.9 1.7 1 1 1 2 2 2 0 CDR ABC transporter LRRNT PF01462.18 ORF64423 - 1.2 8.9 7.1 4.9 6.9 0.3 3.2 3 0 0 3 3 3 0 Leucine rich repeat N-terminal domain zf-LITAF-like PF10601.9 ORF643 - 3.5e-08 33.6 14.7 5.6e-08 32.9 14.7 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain CENP-T_C PF15511.6 ORF63661 - 8.4e-09 35.5 0.1 1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF63661 - 3.5e-05 24.0 0.1 0.0001 22.5 0.0 1.8 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF63661 - 3.9e-05 23.7 0.1 5.7e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 ORF63661 - 7.1e-05 23.1 0.1 0.0001 22.6 0.1 1.4 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 ORF63661 - 0.00042 20.7 0.1 0.00051 20.4 0.1 1.2 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 ORF63661 - 0.0066 16.5 0.0 0.0086 16.1 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF63661 - 0.16 12.5 0.1 0.23 12.0 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A TTC5_OB PF16669.5 ORF63063 - 1e-12 47.7 0.6 1.2e-12 47.6 0.6 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat protein 5 OB fold domain DUF1072 PF06380.11 ORF62887 - 0.16 11.9 0.3 0.16 11.9 0.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) HTH_23 PF13384.6 ORF62404 - 0.02 14.7 2.6 0.044 13.6 2.6 1.5 1 0 0 1 1 1 0 Homeodomain-like domain DUF3760 PF12586.8 ORF61736 - 0.086 13.0 0.7 0.18 12.0 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3760) Apelin PF15360.6 ORF61620 - 0.82 10.3 6.2 0.25 11.9 3.4 1.7 1 1 0 1 1 1 0 APJ endogenous ligand I-EGF_1 PF18372.1 ORF58648 - 0.27 11.4 0.9 0.51 10.5 0.9 1.4 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 zf-LITAF-like PF10601.9 ORF57113 - 0.44 10.8 6.9 0.72 10.2 0.2 2.2 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain 7TM_GPCR_Srv PF10323.9 ORF57035 - 0.2 11.0 0.5 0.23 10.8 0.5 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srv zf-C3HC4 PF00097.25 ORF57035 - 8.1 6.4 17.7 16 5.5 0.8 2.5 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) VWC PF00093.18 ORF56807 - 0.0044 17.3 7.3 0.0066 16.7 7.3 1.3 1 0 0 1 1 1 1 von Willebrand factor type C domain Arm-DNA-bind_3 PF13356.6 ORF56437 - 0.18 12.2 0.1 15 6.0 0.0 2.1 1 1 1 2 2 2 0 Arm DNA-binding domain GIDE PF12483.8 ORF562 - 0.067 12.6 0.1 0.11 11.9 0.0 1.4 1 1 0 1 1 1 0 E3 Ubiquitin ligase zf-BED PF02892.15 ORF52852 - 0.069 13.2 3.4 0.092 12.8 1.2 2.3 2 0 0 2 2 2 0 BED zinc finger U3_assoc_6 PF08640.11 ORF52745 - 0.052 13.6 0.7 0.07 13.2 0.7 1.3 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 6 CytochromB561_N PF09786.9 ORF52745 - 3.5 6.5 14.8 3.9 6.4 14.8 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal HlyD PF00529.20 ORF52718 - 2.4e-13 49.8 0.8 2.4e-13 49.8 0.8 1.7 2 0 0 2 2 2 1 HlyD membrane-fusion protein of T1SS YajC PF02699.15 ORF52415 - 0.091 12.7 0.9 0.15 12.0 0.9 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit DUF4834 PF16118.5 ORF52415 - 0.78 10.7 5.6 1.4 9.9 5.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) TssO PF17561.2 ORF52415 - 1.5 8.9 8.0 0.28 11.3 3.4 1.9 1 1 0 2 2 2 0 Type VI secretion system, TssO DUF1616 PF07760.11 ORF52048 - 0.095 12.1 0.5 0.1 12.0 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) TMEM43 PF07787.12 ORF5186 - 0.24 10.8 6.5 0.28 10.5 6.5 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 WD40 PF00400.32 ORF50851 - 0.0046 17.8 0.3 0.026 15.4 0.0 2.3 3 0 0 3 3 3 1 WD domain, G-beta repeat FAM180 PF15173.6 ORF49991 - 0.086 12.8 0.0 0.13 12.3 0.0 1.3 1 1 0 1 1 1 0 FAM180 family Aa_trans PF01490.18 ORF49300 - 0.00096 18.0 1.9 0.0013 17.5 1.9 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein Fer4_18 PF13746.6 ORF47359 - 0.054 13.7 1.9 0.076 13.2 1.9 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Sporozoite_P67 PF05642.11 ORF4723 - 0.022 12.9 0.1 0.022 12.9 0.1 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Hydrolase_4 PF12146.8 ORF46831 - 0.0011 18.3 0.0 0.0055 16.0 0.0 1.7 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Asp2 PF16929.5 ORF46831 - 0.034 13.1 0.0 0.039 12.9 0.0 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter Rota_NSP4 PF01452.16 ORF46173 - 0.13 11.9 0.2 0.19 11.4 0.2 1.3 1 0 0 1 1 1 0 Rotavirus non structural protein zf_UBZ PF18439.1 ORF45968 - 0.042 13.4 0.4 0.076 12.6 0.4 1.4 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger Gemini_mov PF01708.16 ORF45431 - 0.0022 17.7 0.9 0.0033 17.2 0.9 1.3 1 0 0 1 1 1 1 Geminivirus putative movement protein Arm PF00514.23 ORF44262 - 0.036 14.1 0.0 0.079 13.0 0.0 1.6 1 1 0 1 1 1 0 Armadillo/beta-catenin-like repeat Pox_L5 PF04872.13 ORF44016 - 0.11 12.4 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Poxvirus L5 protein family Papo_T_antigen PF02380.15 ORF43664 - 0.0012 18.9 2.1 0.0018 18.4 2.1 1.4 1 0 0 1 1 1 1 T-antigen specific domain Hydrolase_4 PF12146.8 ORF4329 - 0.0011 18.3 0.0 0.0055 16.0 0.0 1.7 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Asp2 PF16929.5 ORF4329 - 0.034 13.1 0.0 0.039 12.9 0.0 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter Glyco_hydro_72 PF03198.14 ORF42522 - 0.0021 17.4 0.0 0.0026 17.1 0.0 1.1 1 0 0 1 1 1 1 Glucanosyltransferase Memo PF01875.17 ORF4148 - 0.21 10.7 0.0 0.26 10.4 0.0 1.1 1 0 0 1 1 1 0 Memo-like protein CRISPR_Cas2 PF09827.9 ORF41200 - 0.18 12.0 2.3 0.24 11.6 1.6 1.5 1 1 0 1 1 1 0 CRISPR associated protein Cas2 TetR_C_9 PF14514.6 ORF40300 - 0.083 13.0 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain GWT1 PF06423.12 ORF40012 - 0.18 11.9 5.7 0.22 11.6 5.7 1.2 1 0 0 1 1 1 0 GWT1 Calpain_inhib PF00748.19 ORF39906 - 0.0082 16.7 1.9 0.01 16.3 1.9 1.1 1 0 0 1 1 1 1 Calpain inhibitor Med12-LCEWAV PF12145.8 ORF39906 - 0.017 14.0 3.2 0.017 14.0 3.2 1.0 1 0 0 1 1 1 0 Eukaryotic Mediator 12 subunit domain MauJ PF17419.2 ORF39906 - 0.14 11.6 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Methylamine utilization protein MauJ RGS12_us2 PF16611.5 ORF38453 - 0.043 14.2 0.0 0.06 13.8 0.0 1.3 1 0 0 1 1 1 0 Unstructured region between RBD and GoLoco DUF4833 PF16117.5 ORF38321 - 0.09 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4833) PPR_2 PF13041.6 ORF37349 - 3.5e-05 23.9 0.0 5.7e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 PPR repeat family PPR_3 PF13812.6 ORF37349 - 9.2e-05 22.4 0.0 0.00012 22.1 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 ORF37349 - 0.00084 19.4 0.1 0.34 11.3 0.0 2.5 3 0 0 3 3 3 2 PPR repeat DUF4633 PF15464.6 ORF36167 - 0.4 10.9 3.6 6.5 6.9 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4633) Rota_NSP4 PF01452.16 ORF35798 - 0.13 11.9 0.2 0.19 11.4 0.2 1.3 1 0 0 1 1 1 0 Rotavirus non structural protein FidL_like PF15941.5 ORF35743 - 5.3 7.6 8.5 10 6.7 8.0 1.8 1 1 0 1 1 1 0 FidL-like putative membrane protein Ras PF00071.22 ORF35232 - 2.2e-06 27.4 0.2 2.8e-06 27.0 0.2 1.1 1 0 0 1 1 1 1 Ras family TrbI_Ftype PF09677.10 ORF35232 - 0.072 13.4 0.2 0.093 13.1 0.2 1.2 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) Keratin_B2_2 PF13885.6 ORF34691 - 0.19 11.7 6.1 0.41 10.6 6.1 1.6 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein DUF5429 PF17494.2 ORF34213 - 0.085 12.9 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5429) ASFV_J13L PF05568.11 ORF33753 - 0.11 12.2 0.3 0.14 11.9 0.3 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Asp PF00026.23 ORF33624 - 6.1e-09 35.7 0.1 8.1e-09 35.3 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF33624 - 0.00029 21.1 0.1 0.00046 20.5 0.1 1.3 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal MIT PF04212.18 ORF33600 - 0.25 11.5 1.4 1.8 8.7 0.2 2.6 2 1 1 3 3 3 0 MIT (microtubule interacting and transport) domain FOXP-CC PF16159.5 ORF32789 - 0.017 15.7 0.1 0.022 15.4 0.1 1.3 1 0 0 1 1 1 0 FOXP coiled-coil domain FtsL PF04999.13 ORF32449 - 0.036 14.1 1.4 0.036 14.1 1.4 1.7 2 0 0 2 2 2 0 Cell division protein FtsL DUF3347 PF11827.8 ORF32449 - 0.65 10.2 13.8 0.86 9.8 13.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3347) CDC45 PF02724.14 ORF32449 - 1 7.6 26.8 1.2 7.3 26.8 1.0 1 0 0 1 1 1 0 CDC45-like protein Tim54 PF11711.8 ORF32449 - 1.3 7.7 14.0 1.5 7.5 14.0 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 SpoIIIAH PF12685.7 ORF32449 - 2.1 8.1 23.3 2.5 7.9 23.3 1.0 1 0 0 1 1 1 0 SpoIIIAH-like protein Ribosomal_L37 PF08561.10 ORF32449 - 3.3 8.2 16.2 4.2 7.9 16.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L37 CobT PF06213.12 ORF32449 - 4.6 6.6 27.0 5 6.4 27.0 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT DNA_pol_phi PF04931.13 ORF32449 - 4.9 5.1 25.5 5.7 4.9 25.5 1.2 1 0 0 1 1 1 0 DNA polymerase phi TRAP_alpha PF03896.16 ORF32449 - 6.3 5.9 15.0 7.2 5.7 15.0 1.2 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit RR_TM4-6 PF06459.12 ORF32449 - 6.6 6.5 21.6 8.1 6.2 21.6 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 ALMT PF11744.8 ORF32449 - 9.1 5.0 13.0 11 4.7 13.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Presenilin PF01080.17 ORF32449 - 9.8 4.8 18.4 11 4.6 18.4 1.0 1 0 0 1 1 1 0 Presenilin Nop14 PF04147.12 ORF32449 - 9.9 4.2 28.4 12 4.0 28.4 1.1 1 0 0 1 1 1 0 Nop14-like family SURF4 PF02077.15 ORF31935 - 0.0036 16.9 0.1 0.0042 16.7 0.1 1.1 1 0 0 1 1 1 1 SURF4 family WBP-1 PF11669.8 ORF31874 - 0.0067 17.0 1.5 0.0091 16.6 1.5 1.2 1 0 0 1 1 1 1 WW domain-binding protein 1 DUF4446 PF14584.6 ORF31874 - 0.23 11.5 5.5 0.28 11.1 5.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF2500 PF10694.9 ORF31874 - 0.87 10.1 4.1 0.61 10.6 2.5 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2500) Cg6151-P PF10233.9 ORF31316 - 0.21 11.9 0.0 0.26 11.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein CG6151-P Memo PF01875.17 ORF31133 - 0.21 10.7 0.0 0.26 10.4 0.0 1.1 1 0 0 1 1 1 0 Memo-like protein DUF4633 PF15464.6 ORF30431 - 0.4 10.9 3.6 6.5 6.9 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4633) SVIP PF15811.5 ORF29988 - 0.00016 22.1 6.4 0.00016 22.1 6.4 1.7 2 0 0 2 2 2 1 Small VCP/p97-interacting protein zf-rbx1 PF12678.7 ORF29036 - 0.057 13.7 0.6 0.089 13.1 0.6 1.3 1 0 0 1 1 1 0 RING-H2 zinc finger domain SATase_N PF06426.14 ORF28340 - 0.017 15.5 0.3 0.024 15.0 0.3 1.1 1 0 0 1 1 1 0 Serine acetyltransferase, N-terminal Robl_LC7 PF03259.17 ORF25590 - 4.5e-15 55.2 0.0 5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain TPR_2 PF07719.17 ORF25524 - 4e-06 26.5 0.2 0.00071 19.5 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF25524 - 0.00011 21.9 0.5 0.0029 17.4 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF25524 - 0.00018 21.7 0.0 0.00034 20.9 0.0 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF25524 - 0.00038 20.5 0.5 0.25 11.6 0.1 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat EpCAM_N PF18635.1 ORF25524 - 0.038 14.2 0.2 0.16 12.2 0.0 2.0 2 0 0 2 2 2 0 Epithelial cell adhesion molecule N-terminal domain TPR_10 PF13374.6 ORF25524 - 0.13 12.2 0.1 0.31 11.0 0.0 1.6 2 0 0 2 2 2 0 Tetratricopeptide repeat SCA7 PF08313.12 ORF2515 - 0.016 15.1 1.0 0.028 14.3 1.0 1.3 1 0 0 1 1 1 0 SCA7, zinc-binding domain Popeye PF04831.13 ORF2515 - 2.5 8.3 5.1 3.6 7.8 5.1 1.2 1 0 0 1 1 1 0 Popeye protein conserved region ANAPC1 PF12859.7 ORF2513 - 0.31 11.6 1.8 0.38 11.3 1.8 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 DUF3464 PF11947.8 ORF2513 - 1.7 8.4 5.6 2.2 8.0 5.6 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 XTBD PF11952.8 ORF24624 - 1.8e-10 40.5 0.1 2.7e-10 39.8 0.1 1.2 1 0 0 1 1 1 1 XRN-Two Binding Domain, XTBD Acetyltransf_1 PF00583.25 ORF24340 - 4.8e-08 33.2 0.0 5.8e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF24340 - 1.2e-07 32.1 0.0 1.5e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF24340 - 4.1e-07 30.0 0.0 5.1e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF24340 - 0.0017 18.3 0.0 0.0023 17.9 0.0 1.1 1 0 0 1 1 1 1 FR47-like protein PanZ PF12568.8 ORF24340 - 0.066 12.9 0.0 0.077 12.7 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ DUF3318 PF11780.8 ORF24340 - 0.096 12.6 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3318) SPATA25 PF15218.6 ORF23886 - 0.042 13.6 0.6 0.05 13.4 0.6 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 25 BPD_transp_1 PF00528.22 ORF22934 - 8.6e-06 25.6 1.2 9.5e-06 25.5 1.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CorC_HlyC PF03471.17 ORF22934 - 0.083 12.9 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Transporter associated domain PulG PF11773.8 ORF22934 - 0.11 12.4 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 Type II secretory pathway pseudopilin TMEM100 PF16311.5 ORF22934 - 0.11 12.1 0.2 0.22 11.1 0.2 1.6 1 1 0 1 1 1 0 Transmembrane protein 100 Abhydro_lipase PF04083.16 ORF22672 - 8e-10 38.2 0.0 1.1e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region CotH PF08757.11 ORF22510 - 0.16 11.5 0.0 0.26 10.8 0.0 1.3 1 1 0 1 1 1 0 CotH kinase protein zf-Di19 PF05605.12 ORF22292 - 0.059 13.7 0.6 0.059 13.7 0.6 2.0 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DUF3561 PF12084.8 ORF22099 - 1.7e-49 166.3 8.7 1.9e-49 166.1 8.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3561) DUF3054 PF11255.8 ORF22099 - 0.25 11.9 9.3 0.38 11.3 9.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3054) Aa_trans PF01490.18 ORF21897 - 4.9e-07 28.8 2.5 4.9e-07 28.8 2.5 2.0 1 1 1 2 2 2 2 Transmembrane amino acid transporter protein EpCAM_N PF18635.1 ORF21614 - 0.64 10.2 7.7 0.42 10.8 1.8 2.9 3 0 0 3 3 3 0 Epithelial cell adhesion molecule N-terminal domain DUF3678 PF12435.8 ORF21515 - 0.084 12.3 1.7 0.21 11.0 1.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) AAA_30 PF13604.6 ORF21232 - 0.16 11.7 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain DOT1 PF08123.13 ORF21080 - 0.0054 16.3 0.4 0.0063 16.1 0.4 1.0 1 0 0 1 1 1 1 Histone methylation protein DOT1 FmiP_Thoc5 PF09766.9 ORF21080 - 0.048 12.9 4.2 0.05 12.9 4.2 1.0 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 DDDD PF10161.9 ORF19579 - 0.19 11.5 0.0 0.36 10.6 0.0 1.5 1 0 0 1 1 1 0 Putative mitochondrial precursor protein SPP PF06550.11 ORF17687 - 0.07 12.6 0.1 0.077 12.4 0.1 1.1 1 0 0 1 1 1 0 Signal-peptide peptidase, presenilin aspartyl protease PH_3 PF14593.6 ORF16514 - 1.8e-15 56.9 0.5 2.2e-15 56.6 0.5 1.0 1 0 0 1 1 1 1 PH domain PH PF00169.29 ORF16514 - 2.7e-08 34.2 0.3 3.8e-08 33.8 0.3 1.2 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF16514 - 2.6e-05 24.4 0.0 3.2e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain PH_13 PF16652.5 ORF16514 - 0.023 14.5 0.3 0.031 14.1 0.3 1.4 1 1 0 1 1 1 0 Pleckstrin homology domain PH_2 PF08458.10 ORF16514 - 0.029 14.7 0.0 0.052 13.9 0.0 1.4 1 1 0 1 1 1 0 Plant pleckstrin homology-like region Aminotran_3 PF00202.21 ORF16030 - 0.0039 15.9 0.0 0.0044 15.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III HTH_18 PF12833.7 ORF1538 - 1.1e-23 83.3 1.4 1.3e-23 83.0 1.4 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF1538 - 4.3e-19 68.1 0.2 1.1e-12 47.7 0.1 2.1 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_3 PF01381.22 ORF1538 - 0.11 12.5 0.0 2.4 8.3 0.0 2.5 2 1 1 3 3 3 0 Helix-turn-helix GIDE PF12483.8 ORF152867 - 0.067 12.6 0.1 0.11 11.9 0.0 1.4 1 1 0 1 1 1 0 E3 Ubiquitin ligase NIF PF03031.18 ORF152017 - 1.1e-08 35.1 0.0 1.3e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase FYVE PF01363.21 ORF151029 - 0.7 10.1 9.2 0.99 9.6 9.2 1.2 1 0 0 1 1 1 0 FYVE zinc finger Robl_LC7 PF03259.17 ORF150709 - 4.5e-15 55.2 0.0 5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain Thioredoxin PF00085.20 ORF150254 - 2.2e-24 85.4 0.1 2.6e-24 85.2 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF150254 - 3.9e-05 24.1 0.1 0.00014 22.2 0.1 1.8 1 1 0 1 1 1 1 Thioredoxin-like domain AhpC-TSA PF00578.21 ORF150254 - 0.0002 21.3 0.0 0.0003 20.7 0.0 1.3 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 ORF150254 - 0.00053 20.3 0.0 0.0014 18.9 0.0 1.8 1 1 1 2 2 2 1 Thioredoxin-like OST3_OST6 PF04756.13 ORF150254 - 0.00084 18.8 0.0 0.00087 18.7 0.0 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Redoxin PF08534.10 ORF150254 - 0.0013 18.5 0.1 0.0021 17.8 0.1 1.4 1 1 0 1 1 1 1 Redoxin Thioredoxin_7 PF13899.6 ORF150254 - 0.011 15.8 0.1 0.018 15.2 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like Flagellin_IN PF07196.13 ORF150254 - 0.048 13.8 1.5 9.2 6.6 0.0 2.8 3 0 0 3 3 3 0 Flagellin hook IN motif MPS2 PF17060.5 ORF150121 - 0.61 9.3 1.4 0.77 9.0 1.4 1.1 1 0 0 1 1 1 0 Monopolar spindle protein 2 DUF2769 PF10967.8 ORF149869 - 2 9.1 14.3 1.4 9.7 12.6 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2769) DUF2632 PF10943.8 ORF149608 - 0.045 13.3 0.8 0.072 12.7 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2632) Fer4_18 PF13746.6 ORF148416 - 0.054 13.7 1.9 0.076 13.2 1.9 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF4718 PF15842.5 ORF147572 - 0.24 11.2 8.6 0.26 11.1 8.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) TraX PF05857.11 ORF147287 - 0.027 14.6 3.8 0.03 14.4 3.8 1.0 1 0 0 1 1 1 0 TraX protein DUF1514 PF07438.11 ORF147287 - 0.15 11.9 1.6 0.25 11.2 0.0 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1514) LIM PF00412.22 ORF146553 - 0.013 15.7 0.0 0.02 15.1 0.0 1.3 1 0 0 1 1 1 0 LIM domain HSP70 PF00012.20 ORF146229 - 0.21 9.7 6.4 0.24 9.5 6.4 1.0 1 0 0 1 1 1 0 Hsp70 protein CD225 PF04505.12 ORF145978 - 0.058 13.5 0.8 0.082 13.1 0.8 1.3 1 0 0 1 1 1 0 Interferon-induced transmembrane protein GGDEF_2 PF17853.1 ORF144549 - 0.059 13.6 0.0 0.075 13.3 0.0 1.2 1 0 0 1 1 1 0 GGDEF-like domain CENP-T_C PF15511.6 ORF143862 - 8.4e-09 35.5 0.1 1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF143862 - 3.5e-05 24.0 0.1 0.0001 22.5 0.0 1.8 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF143862 - 3.9e-05 23.7 0.1 5.7e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 ORF143862 - 7.1e-05 23.1 0.1 0.0001 22.6 0.1 1.4 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 ORF143862 - 0.00042 20.7 0.1 0.00051 20.4 0.1 1.2 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 ORF143862 - 0.0066 16.5 0.0 0.0086 16.1 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF143862 - 0.16 12.5 0.1 0.23 12.0 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A DUF4301 PF14134.6 ORF14382 - 0.15 10.9 0.0 0.15 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) LapA_dom PF06305.11 ORF143768 - 2 8.3 4.4 2.8 7.8 3.5 1.8 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain FxsA PF04186.13 ORF14349 - 0.26 11.4 0.0 0.39 10.8 0.0 1.2 1 0 0 1 1 1 0 FxsA cytoplasmic membrane protein DUF3464 PF11947.8 ORF141701 - 0.15 11.8 0.1 0.17 11.6 0.1 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Papo_T_antigen PF02380.15 ORF13835 - 0.0012 18.9 2.1 0.0018 18.4 2.1 1.4 1 0 0 1 1 1 1 T-antigen specific domain Seryl_tRNA_N PF02403.22 ORF137733 - 0.01 16.1 0.3 0.014 15.6 0.3 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF4811 PF16069.5 ORF13754 - 0.02 14.8 0.2 0.024 14.5 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) BPD_transp_1 PF00528.22 ORF137534 - 8.6e-06 25.6 1.2 9.5e-06 25.5 1.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CorC_HlyC PF03471.17 ORF137534 - 0.083 12.9 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Transporter associated domain PulG PF11773.8 ORF137534 - 0.11 12.4 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 Type II secretory pathway pseudopilin TMEM100 PF16311.5 ORF137534 - 0.11 12.1 0.2 0.22 11.1 0.2 1.6 1 1 0 1 1 1 0 Transmembrane protein 100 DUF5456 PF17539.2 ORF136556 - 0.2 11.5 0.0 0.27 11.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5456) TIP49_C PF17856.1 ORF135597 - 0.056 13.6 0.1 0.13 12.5 0.0 1.5 1 1 0 1 1 1 0 TIP49 AAA-lid domain DUF5401 PF17380.2 ORF135133 - 0.11 10.5 0.6 0.13 10.3 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Memo PF01875.17 ORF134882 - 0.21 10.7 0.0 0.26 10.4 0.0 1.1 1 0 0 1 1 1 0 Memo-like protein DUF488 PF04343.13 ORF132420 - 1e-26 93.9 0.5 1.1e-25 90.6 0.5 1.9 1 1 0 1 1 1 1 Protein of unknown function, DUF488 DUF4633 PF15464.6 ORF132340 - 0.4 10.9 3.6 6.5 6.9 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4633) Phage_P2_GpU PF06995.11 ORF132146 - 0.045 13.4 0.0 0.078 12.6 0.0 1.4 1 1 0 1 1 1 0 Phage P2 GpU DUF4315 PF14193.6 ORF132146 - 3 7.9 13.6 1.7 8.7 6.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4315) EF-hand_1 PF00036.32 ORF131806 - 2.4e-06 26.7 1.5 5.8e-06 25.5 1.5 1.7 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF131806 - 0.00016 21.3 0.5 0.00033 20.3 0.5 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF131806 - 0.021 15.3 7.3 0.045 14.2 7.3 1.8 1 1 0 1 1 1 0 EF-hand domain pair DUF2076 PF09849.9 ORF131806 - 0.77 9.8 11.0 0.95 9.5 11.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) BUD22 PF09073.10 ORF131806 - 1.5 8.1 23.9 1.5 8.0 23.9 1.1 1 0 0 1 1 1 0 BUD22 FAM60A PF15396.6 ORF131806 - 3.2 7.7 4.6 3.5 7.6 4.6 1.1 1 0 0 1 1 1 0 Protein Family FAM60A DUF913 PF06025.12 ORF131806 - 3.6 6.5 7.2 4.1 6.3 7.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Mito_carr PF00153.27 ORF131546 - 1.5e-15 56.9 0.0 1.8e-15 56.6 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein LIM PF00412.22 ORF130487 - 0.013 15.7 0.0 0.02 15.1 0.0 1.3 1 0 0 1 1 1 0 LIM domain Robl_LC7 PF03259.17 ORF129617 - 4.5e-15 55.2 0.0 5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain DUF4821 PF16092.5 ORF12827 - 0.068 12.8 0.2 0.078 12.6 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4821) Lung_7-TM_R PF06814.13 ORF128163 - 0.021 14.1 5.2 0.024 13.9 5.2 1.1 1 0 0 1 1 1 0 Lung seven transmembrane receptor U-box PF04564.15 ORF128124 - 0.00036 20.7 0.1 0.00061 19.9 0.1 1.4 1 0 0 1 1 1 1 U-box domain LIFR_N PF18207.1 ORF128124 - 0.042 14.2 0.2 0.094 13.1 0.1 1.6 1 1 1 2 2 2 0 Leukemia inhibitory factor receptor N-terminal domain V-ATPase_H_C PF11698.8 ORF127165 - 0.043 13.9 0.2 0.059 13.5 0.2 1.2 1 0 0 1 1 1 0 V-ATPase subunit H Myb_DNA-bind_3 PF12776.7 ORF127165 - 0.12 13.3 1.1 0.18 12.8 1.1 1.3 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain SPP PF06550.11 ORF126756 - 0.079 12.4 0.1 0.085 12.3 0.1 1.0 1 0 0 1 1 1 0 Signal-peptide peptidase, presenilin aspartyl protease FAM209 PF15206.6 ORF126014 - 0.12 12.1 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 FAM209 family FOXP-CC PF16159.5 ORF125982 - 0.01 16.4 0.0 0.014 16.1 0.0 1.3 1 0 0 1 1 1 0 FOXP coiled-coil domain GIDE PF12483.8 ORF125699 - 0.067 12.6 0.1 0.11 11.9 0.0 1.4 1 1 0 1 1 1 0 E3 Ubiquitin ligase UPF0506 PF11703.8 ORF124769 - 0.23 11.9 6.3 2.5 8.5 2.0 2.2 2 0 0 2 2 2 0 UPF0506 Dickkopf_N PF04706.12 ORF124769 - 5.7 7.5 11.5 0.5 10.9 4.4 2.2 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region PRP38 PF03371.15 ORF124558 - 0.076 12.9 5.2 0.09 12.6 5.2 1.1 1 0 0 1 1 1 0 PRP38 family FOXP-CC PF16159.5 ORF123988 - 0.017 15.7 0.1 0.022 15.4 0.1 1.3 1 0 0 1 1 1 0 FOXP coiled-coil domain DUF3678 PF12435.8 ORF123265 - 5.2 6.5 13.7 1.5 8.2 3.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) DUF5582 PF17819.1 ORF123147 - 0.11 13.0 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5582) IDO PF01231.18 ORF122889 - 0.17 10.6 0.6 0.2 10.4 0.6 1.0 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase ATP-synt_E_2 PF08112.11 ORF122879 - 0.0053 17.0 0.5 0.28 11.5 0.1 2.2 2 0 0 2 2 2 2 ATP synthase epsilon subunit Tricho_coat PF05892.11 ORF122879 - 0.031 14.0 0.1 0.059 13.1 0.0 1.4 1 1 0 1 1 1 0 Trichovirus coat protein PRANC PF09372.10 ORF122879 - 0.033 14.5 0.2 0.046 14.1 0.2 1.2 1 0 0 1 1 1 0 PRANC domain Capsule_synth PF05159.14 ORF122663 - 0.023 14.1 1.1 0.027 13.9 1.1 1.0 1 0 0 1 1 1 0 Capsule polysaccharide biosynthesis protein SPC25 PF06703.11 ORF122396 - 0.1 12.4 2.6 0.17 11.7 2.7 1.3 1 1 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) GCD14 PF08704.10 ORF122146 - 8.9e-13 48.5 1.6 9.9e-13 48.3 1.6 1.0 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit CPSF100_C PF13299.6 ORF122146 - 0.0043 17.3 0.3 0.0047 17.1 0.3 1.1 1 0 0 1 1 1 1 Cleavage and polyadenylation factor 2 C-terminal CRA PF06589.11 ORF122146 - 0.15 12.2 6.9 0.19 11.8 6.9 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) YqfQ PF14181.6 ORF122146 - 0.19 11.9 3.6 0.23 11.6 3.6 1.1 1 0 0 1 1 1 0 YqfQ-like protein Peptidase_S49_N PF08496.10 ORF122146 - 0.68 10.0 4.7 0.81 9.7 4.7 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal FAM176 PF14851.6 ORF122146 - 7.8 6.2 7.2 15 5.2 7.2 1.6 1 1 0 1 1 1 0 FAM176 family zf-CXXC PF02008.20 ORF121687 - 0.0032 17.5 5.8 0.0032 17.5 5.8 1.6 2 0 0 2 2 2 1 CXXC zinc finger domain DDE_3 PF13358.6 ORF121558 - 0.0099 15.6 0.0 0.012 15.3 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF5323 PF17257.2 ORF121479 - 0.21 11.5 5.6 1.3 9.0 0.1 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5323) VWC PF00093.18 ORF120069 - 8.5 6.8 14.5 5.9 7.3 11.2 2.1 1 1 1 2 2 2 0 von Willebrand factor type C domain U3_assoc_6 PF08640.11 ORF119895 - 0.052 13.6 0.7 0.07 13.2 0.7 1.3 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 6 CytochromB561_N PF09786.9 ORF119895 - 3.5 6.5 14.8 3.9 6.4 14.8 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal Thiol_cytolysin PF01289.19 ORF11979 - 0.01 14.8 1.5 0.011 14.7 1.5 1.0 1 0 0 1 1 1 0 Thiol-activated cytolysin YokU PF14122.6 ORF11979 - 0.23 11.5 6.8 0.081 12.9 3.9 1.7 1 1 1 2 2 2 0 YokU-like protein, putative antitoxin Helo_like_N PF17111.5 ORF119155 - 0.037 13.4 0.4 0.04 13.3 0.4 1.2 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins Chromo PF00385.24 ORF119093 - 1.4e-13 50.5 0.2 1.4e-13 50.5 0.2 1.6 2 0 0 2 2 2 1 Chromo (CHRromatin Organisation MOdifier) domain Tudor-knot PF11717.8 ORF119093 - 0.026 14.4 1.6 0.045 13.7 1.6 1.5 1 1 0 1 1 1 0 RNA binding activity-knot of a chromodomain Chromo_shadow PF01393.19 ORF119093 - 0.031 14.4 0.2 0.11 12.6 0.0 2.0 2 0 0 2 2 2 0 Chromo shadow domain Spc7 PF08317.11 ORF117001 - 6.3e-05 22.0 10.3 6.6e-05 21.9 10.3 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein HIP1_clath_bdg PF16515.5 ORF117001 - 0.00059 20.4 7.6 0.00059 20.4 7.6 1.8 2 0 0 2 2 2 1 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF3552 PF12072.8 ORF117001 - 0.037 13.5 15.5 0.084 12.3 15.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) CEP209_CC5 PF16574.5 ORF117001 - 0.041 14.1 13.3 0.15 12.2 4.4 2.1 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 HemX PF04375.14 ORF117001 - 0.075 12.3 6.3 0.089 12.1 6.3 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF1664 PF07889.12 ORF117001 - 0.1 12.7 6.5 0.033 14.2 3.7 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Phlebovirus_NSM PF07246.11 ORF117001 - 0.11 11.8 9.1 0.12 11.7 9.1 1.1 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M 5_nucleotid PF05761.14 ORF117001 - 0.21 10.5 3.5 0.22 10.4 3.5 1.1 1 0 0 1 1 1 0 5' nucleotidase family Exonuc_VII_L PF02601.15 ORF117001 - 0.22 11.0 5.8 0.27 10.8 5.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Jnk-SapK_ap_N PF09744.9 ORF117001 - 0.23 11.7 10.6 0.091 13.0 7.7 1.6 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 TMPIT PF07851.13 ORF117001 - 0.28 10.4 4.5 0.33 10.2 4.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF4407 PF14362.6 ORF117001 - 0.32 10.3 6.0 0.39 10.0 6.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) NPV_P10 PF05531.12 ORF117001 - 0.34 11.4 4.6 2.8 8.5 2.8 2.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Seryl_tRNA_N PF02403.22 ORF117001 - 0.69 10.2 16.0 4.3 7.6 0.6 2.5 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF2203 PF09969.9 ORF117001 - 1.3 9.8 6.8 0.73 10.6 4.5 1.6 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF117001 - 1.3 8.0 9.9 1.5 7.8 9.9 1.3 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YlqD PF11068.8 ORF117001 - 1.4 9.3 13.6 0.69 10.3 10.0 1.8 1 1 1 2 2 2 0 YlqD protein Phage_GP20 PF06810.11 ORF117001 - 2.6 7.8 16.7 5.2 6.9 13.2 2.0 1 1 1 2 2 2 0 Phage minor structural protein GP20 DivIC PF04977.15 ORF117001 - 2.6 7.9 14.4 9.5 6.1 5.5 2.7 1 1 1 2 2 2 0 Septum formation initiator TBCA PF02970.16 ORF117001 - 5.8 7.3 13.8 3.6 8.0 9.6 2.1 1 1 1 2 2 2 0 Tubulin binding cofactor A DUF4200 PF13863.6 ORF117001 - 9.5 6.7 21.0 50 4.3 21.0 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) EF-hand_7 PF13499.6 ORF116771 - 5e-14 52.5 6.8 3e-09 37.2 0.8 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF116771 - 7.9e-14 50.1 6.0 6.5e-06 25.3 0.2 3.2 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF116771 - 3.1e-11 42.2 6.4 6.1e-06 25.7 0.8 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF116771 - 2.3e-08 33.2 1.8 0.0016 17.9 0.2 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF116771 - 4.8e-07 29.5 7.6 0.04 13.8 0.7 3.1 1 1 2 3 3 3 3 EF-hand domain pair GATase PF00117.28 ORF116766 - 7.1e-26 91.2 0.0 7.8e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 ORF116766 - 1.3e-06 28.3 0.0 1.5e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Peptidase C26 Pannexin_like PF12534.8 ORF116655 - 1.3 8.0 11.7 1.5 7.8 11.7 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 CSRNP_N PF16019.5 ORF116655 - 2.8 7.8 11.8 3.2 7.6 11.8 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus CSG2 PF16965.5 ORF116655 - 4.5 6.1 8.6 5.4 5.9 8.6 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator Zip PF02535.22 ORF116655 - 5.5 6.1 10.2 6 6.0 10.2 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF116655 - 8.2 5.1 13.4 8.7 5.0 13.4 1.0 1 0 0 1 1 1 0 Presenilin NPR3 PF03666.13 ORF116655 - 8.6 5.0 16.3 8.6 5.0 16.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 FAM60A PF15396.6 ORF116655 - 8.7 6.3 14.6 9.7 6.1 14.6 1.1 1 0 0 1 1 1 0 Protein Family FAM60A CDC45 PF02724.14 ORF116655 - 9 4.4 18.1 9.6 4.4 18.1 1.0 1 0 0 1 1 1 0 CDC45-like protein Ku_PK_bind PF08785.11 ORF116258 - 0.0052 16.9 0.6 0.0081 16.3 0.6 1.5 1 1 0 1 1 1 1 Ku C terminal domain like DUF1866 PF08952.11 ORF116258 - 0.085 12.7 0.4 0.1 12.4 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1866) FAM176 PF14851.6 ORF116081 - 0.0049 16.5 0.0 0.0056 16.4 0.0 1.1 1 0 0 1 1 1 1 FAM176 family Memo PF01875.17 ORF115773 - 0.21 10.7 0.0 0.26 10.4 0.0 1.1 1 0 0 1 1 1 0 Memo-like protein DUF406 PF04175.12 ORF115564 - 3.6e-29 101.1 2.7 4.1e-29 100.9 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF406) NAF PF03822.14 ORF115564 - 0.066 13.4 0.3 1.2 9.4 0.1 2.1 2 0 0 2 2 2 0 NAF domain UPAR_LY6 PF00021.21 ORF114135 - 0.027 15.1 2.3 0.035 14.8 2.3 1.2 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Peptidase_S10 PF00450.22 ORF110775 - 0.047 13.1 0.0 3.3 7.0 0.0 2.0 1 1 1 2 2 2 0 Serine carboxypeptidase ITI_HC_C PF06668.12 ORF110775 - 0.086 12.5 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Inter-alpha-trypsin inhibitor heavy chain C-terminus ABC_tran_2 PF16949.5 ORF110355 - 0.076 11.8 1.0 0.087 11.6 1.0 1.0 1 0 0 1 1 1 0 Putative ATP-binding cassette zf-BED PF02892.15 ORF11011 - 0.069 13.2 3.4 0.092 12.8 1.2 2.3 2 0 0 2 2 2 0 BED zinc finger EF-hand_1 PF00036.32 ORF109212 - 6.7e-14 50.3 0.1 6.4e-06 25.4 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF109212 - 6.1e-12 44.5 0.2 5.3e-05 22.8 0.0 2.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF109212 - 4.4e-11 43.1 0.0 6.1e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF109212 - 1.3e-10 40.3 0.1 7.6e-05 22.0 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF109212 - 3.5e-08 33.2 0.6 4.5e-06 26.4 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair DUF674 PF05056.12 ORF109212 - 0.031 13.2 0.3 0.032 13.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) EF-hand_4 PF12763.7 ORF109212 - 0.041 13.8 1.3 0.33 10.9 0.1 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Cdc6_C PF09079.11 ORF109212 - 0.12 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain GWT1 PF06423.12 ORF10874 - 0.18 11.9 5.7 0.22 11.6 5.7 1.2 1 0 0 1 1 1 0 GWT1 DUF2770 PF10968.8 ORF10852 - 0.2 11.6 0.7 0.2 11.6 0.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2770) Pentapeptide_4 PF13599.6 ORF108247 - 0.00048 20.2 0.2 0.0056 16.8 0.1 2.1 2 0 0 2 2 2 1 Pentapeptide repeats (9 copies) Lung_7-TM_R PF06814.13 ORF107683 - 0.021 14.1 5.2 0.024 13.9 5.2 1.1 1 0 0 1 1 1 0 Lung seven transmembrane receptor U3_assoc_6 PF08640.11 ORF107532 - 0.052 13.6 0.7 0.07 13.2 0.7 1.3 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 6 CytochromB561_N PF09786.9 ORF107532 - 3.5 6.5 14.8 3.9 6.4 14.8 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal RRM_1 PF00076.22 ORF107499 - 7.8e-07 28.8 0.4 2.5e-06 27.2 0.1 1.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SET_assoc PF11767.8 ORF107499 - 0.00061 19.4 0.1 0.0011 18.6 0.1 1.6 1 0 0 1 1 1 1 Histone lysine methyltransferase SET associated E1_dh PF00676.20 ORF107499 - 0.004 16.2 0.5 0.0049 15.8 0.5 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component Limkain-b1 PF11608.8 ORF107499 - 0.11 12.6 0.1 0.29 11.2 0.0 1.7 2 0 0 2 2 2 0 Limkain b1 GWT1 PF06423.12 ORF107128 - 0.18 11.9 5.7 0.22 11.6 5.7 1.2 1 0 0 1 1 1 0 GWT1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks249.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks249.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks249.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks249.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aconitase PF00330.20 ORF141283 - 6.2e-42 144.2 0.0 8.6e-40 137.1 0.0 2.4 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) PI-TkoII_IV PF18714.1 ORF141283 - 0.069 12.6 0.0 1.9 8.0 0.0 2.3 2 0 0 2 2 2 0 DNA polymerase II intein Domain IV MbeD_MobD PF04899.12 ORF122030 - 0.073 13.2 0.3 0.21 11.7 0.3 1.7 1 0 0 1 1 1 0 MbeD/MobD like Piezo_RRas_bdg PF12166.8 ORF119954 - 9.1e-91 305.3 5.6 1e-90 305.0 5.6 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain HECT PF00632.25 ORF119954 - 0.00034 20.2 1.0 0.0016 18.0 1.0 2.0 1 1 0 1 1 1 1 HECT-domain (ubiquitin-transferase) MatE PF01554.18 ORF118302 - 4e-20 72.1 29.9 1.2e-17 64.1 2.8 3.2 3 1 0 3 3 3 2 MatE IRS PF02174.17 ORF112131 - 0.053 13.4 0.4 0.12 12.2 0.4 1.5 1 0 0 1 1 1 0 PTB domain (IRS-1 type) CRM1_repeat PF18777.1 ORF100632 - 0.53 9.8 3.2 14 5.3 0.2 2.6 1 1 1 2 2 2 0 Chromosome region maintenance or exportin repeat Pkinase PF00069.25 ORF88259 - 4e-71 239.5 0.0 5.8e-71 238.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF88259 - 4.8e-33 114.5 0.0 6.2e-33 114.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF88259 - 0.0067 15.8 0.1 0.026 13.8 0.0 1.9 2 0 0 2 2 2 1 Kinase-like Sun2_CC2 PF18580.1 ORF88259 - 0.22 11.8 0.1 0.53 10.5 0.1 1.6 1 0 0 1 1 1 0 SUN2 coiled coil domain 2 VPS9 PF02204.18 ORF87599 - 3e-08 33.8 1.2 3e-08 33.8 1.2 3.5 3 0 0 3 3 3 2 Vacuolar sorting protein 9 (VPS9) domain Glyco_hydro_7 PF00840.20 ORF86073 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 VPS9 PF02204.18 ORF85930 - 3e-08 33.8 1.2 3e-08 33.8 1.2 3.5 3 0 0 3 3 3 2 Vacuolar sorting protein 9 (VPS9) domain MFS_1 PF07690.16 ORF81306 - 4.3e-42 144.3 43.4 3.1e-27 95.4 29.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF81306 - 0.24 10.2 25.1 0.032 13.1 15.7 2.8 3 0 0 3 3 3 0 MFS_1 like family DUF3899 PF13038.6 ORF81306 - 0.61 10.6 0.1 0.61 10.6 0.1 4.3 3 1 0 3 3 3 0 Domain of unknown function (DUF3899) Glyco_hydro_7 PF00840.20 ORF80051 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Peptidase_S28 PF05577.12 ORF77622 - 1.7e-83 280.8 2.0 2.6e-83 280.3 2.0 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Glyco_hydro_7 PF00840.20 ORF61935 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 TPR_16 PF13432.6 ORF60719 - 0.053 14.2 9.2 0.38 11.4 8.3 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF60719 - 0.22 11.2 2.5 8.3 6.2 0.2 3.0 3 0 0 3 3 3 0 TPR repeat TPR_2 PF07719.17 ORF60719 - 0.4 10.9 9.3 8.7 6.7 0.1 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat Pkinase PF00069.25 ORF58869 - 4e-71 239.5 0.0 5.8e-71 238.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58869 - 4.8e-33 114.5 0.0 6.2e-33 114.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF58869 - 0.0067 15.8 0.1 0.026 13.8 0.0 1.9 2 0 0 2 2 2 1 Kinase-like Sun2_CC2 PF18580.1 ORF58869 - 0.22 11.8 0.1 0.53 10.5 0.1 1.6 1 0 0 1 1 1 0 SUN2 coiled coil domain 2 Glyco_hydro_7 PF00840.20 ORF55842 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Asp PF00026.23 ORF52965 - 8.6e-21 74.7 0.1 1.2e-20 74.2 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF52965 - 0.0066 16.2 0.0 0.015 15.1 0.0 1.6 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Glyco_transf_5 PF08323.11 ORF52341 - 3.2e-72 243.2 0.2 1.4e-71 241.0 0.0 1.9 2 0 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 ORF52341 - 2e-12 47.0 0.0 3.1e-12 46.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 ORF52341 - 1.2e-11 44.9 0.9 3.2e-10 40.3 2.4 2.5 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 ORF52341 - 2.5e-10 41.0 6.6 1.7e-08 35.1 4.3 3.0 2 2 1 3 3 3 2 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 ORF52341 - 4.5e-06 27.1 0.0 9.1e-06 26.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 SDH_alpha PF03313.15 ORF42079 - 3.1e-98 328.6 5.1 3.9e-98 328.3 5.1 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain SDH_beta PF03315.15 ORF42079 - 3.6e-54 183.3 0.1 5.7e-54 182.7 0.1 1.3 1 0 0 1 1 1 1 Serine dehydratase beta chain MmgE_PrpD PF03972.14 ORF42079 - 0.0004 19.1 1.0 0.00055 18.6 1.0 1.1 1 0 0 1 1 1 1 MmgE/PrpD family Asp PF00026.23 ORF29515 - 6.4e-22 78.4 0.1 1.4e-21 77.3 0.1 1.5 2 0 0 2 2 2 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF29515 - 0.0029 17.4 0.0 0.0051 16.6 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Shisa PF13908.6 ORF29515 - 0.02 15.1 0.0 0.037 14.3 0.0 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator p450 PF00067.22 ORF24862 - 3.3e-52 177.8 1.2 4.4e-52 177.4 1.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 ENTH PF01417.20 ORF24862 - 0.056 13.5 0.0 0.22 11.6 0.0 2.2 1 1 0 1 1 1 0 ENTH domain DUF3135 PF11333.8 ORF24862 - 0.11 12.7 0.1 0.24 11.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) ADK PF00406.22 ORF21325 - 2.1e-54 183.7 0.2 6.9e-31 107.4 0.0 2.4 2 0 0 2 2 2 2 Adenylate kinase AAA_17 PF13207.6 ORF21325 - 1.9e-32 112.5 0.1 3.1e-17 63.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 ORF21325 - 4.9e-13 49.8 0.1 3.7e-06 27.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 ORF21325 - 8.6e-07 29.2 0.0 0.0029 17.8 0.1 3.4 3 1 0 3 3 3 2 AAA domain RuvB_N PF05496.12 ORF21325 - 0.0001 22.1 0.0 0.45 10.2 0.0 2.3 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 ORF21325 - 0.00017 22.0 0.0 0.0017 18.8 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Hydin_ADK PF17213.3 ORF21325 - 0.00039 20.8 0.1 0.05 13.9 0.0 2.6 3 0 0 3 3 2 1 Hydin Adenylate kinase-like domain Cytidylate_kin PF02224.18 ORF21325 - 0.00044 20.0 0.0 0.96 9.1 0.0 2.4 2 0 0 2 2 2 2 Cytidylate kinase Cytidylate_kin2 PF13189.6 ORF21325 - 0.0005 20.2 0.1 0.29 11.2 0.0 2.8 2 1 0 2 2 2 1 Cytidylate kinase-like family Rad17 PF03215.15 ORF21325 - 0.00085 19.3 0.0 0.4 10.6 0.0 2.5 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_5 PF07728.14 ORF21325 - 0.00087 19.3 0.0 0.41 10.6 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Thymidylate_kin PF02223.17 ORF21325 - 0.0014 18.3 0.2 4.6 6.9 0.0 3.5 2 1 1 3 3 3 1 Thymidylate kinase AAA_28 PF13521.6 ORF21325 - 0.0043 17.3 0.0 0.025 14.8 0.0 2.0 2 0 0 2 2 2 1 AAA domain DUF5582 PF17819.1 ORF21325 - 0.0052 17.2 0.2 0.012 16.1 0.2 1.6 1 0 0 1 1 1 1 Family of unknown function (DUF5582) DUF5586 PF17824.1 ORF21325 - 0.019 14.1 0.0 0.029 13.5 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5586) AAA_16 PF13191.6 ORF21325 - 0.028 14.8 0.0 0.46 10.8 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain Toxin_25 PF08095.11 ORF21325 - 0.084 12.8 1.3 0.18 11.8 0.1 2.1 2 0 0 2 2 2 0 Hefutoxin family RIIa PF02197.17 ORF21325 - 0.14 11.9 0.0 0.37 10.5 0.0 1.8 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit Sigma54_activ_2 PF14532.6 ORF21325 - 0.14 12.3 0.0 2.4 8.3 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain Glyco_hydro_7 PF00840.20 ORF152388 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Glyco_hydro_7 PF00840.20 ORF147388 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Pkinase PF00069.25 ORF13150 - 3.8e-40 137.9 0.1 7.4e-40 137.0 0.1 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13150 - 3.2e-25 88.9 0.0 5.5e-25 88.1 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF13150 - 5.4e-07 29.2 0.0 1e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF13150 - 0.025 14.0 0.2 0.044 13.1 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Asp PF00026.23 ORF131398 - 1e-22 81.0 0.2 2.2e-22 79.9 0.1 1.5 2 0 0 2 2 2 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF131398 - 0.0028 17.4 0.0 0.0051 16.6 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Shisa PF13908.6 ORF131398 - 0.02 15.1 0.0 0.037 14.3 0.0 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Glyco_hydro_7 PF00840.20 ORF128680 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Glyco_hydro_7 PF00840.20 ORF124575 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Selenoprotein_S PF06936.11 ORF115506 - 8.3 6.2 22.0 10 5.9 8.8 2.4 2 0 0 2 2 2 0 Selenoprotein S (SelS) Glyco_hydro_7 PF00840.20 ORF114474 - 2.4e-176 586.7 7.9 2.7e-176 586.6 7.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 AdoHcyase PF05221.17 ORF110707 - 7.8e-133 442.2 0.1 8.9e-133 442.0 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 ORF110707 - 3.7e-80 267.7 4.2 6.4e-80 266.9 4.2 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 ORF110707 - 1.2e-08 34.5 0.2 2.3e-08 33.6 0.2 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF110707 - 0.00011 22.3 0.2 0.00027 21.0 0.2 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 ORF110707 - 0.00013 21.6 0.3 0.00022 20.9 0.3 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 ORF110707 - 0.00027 21.4 0.4 0.0013 19.1 0.3 2.1 2 0 0 2 2 2 1 Putative NAD(P)-binding THF_DHG_CYH_C PF02882.19 ORF110707 - 0.00029 20.2 1.8 0.0013 18.0 1.7 2.1 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TrkA_N PF02254.18 ORF110707 - 0.00085 19.6 0.4 0.0037 17.5 0.4 2.0 1 1 0 1 1 1 1 TrkA-N domain ELFV_dehydrog PF00208.21 ORF110707 - 0.001 18.8 0.2 0.0018 18.0 0.2 1.4 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 3HCDH_N PF02737.18 ORF110707 - 0.054 13.4 0.7 0.13 12.2 0.5 1.6 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pkinase PF00069.25 ORF110471 - 1.3e-72 244.3 1.7 1.8e-72 243.9 1.7 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF110471 - 2.6e-40 138.3 0.2 3.9e-40 137.8 0.2 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase POLO_box PF00659.18 ORF110471 - 3.2e-19 68.9 0.1 9.7e-19 67.3 0.1 1.9 1 0 0 1 1 1 1 POLO box duplicated region Kinase-like PF14531.6 ORF110471 - 3.9e-12 46.1 0.0 4.2e-11 42.7 0.0 2.0 1 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF110471 - 1.8e-06 27.0 0.0 1.8e-06 27.0 0.0 2.1 3 0 0 3 3 3 1 Fungal protein kinase Inos-1-P_synth PF01658.17 ORF110471 - 0.014 15.7 0.2 0.58 10.4 0.2 2.5 2 0 0 2 2 2 0 Myo-inositol-1-phosphate synthase 120_Rick_ant PF12574.8 ORF110471 - 0.095 11.9 0.0 0.17 11.0 0.0 1.3 1 0 0 1 1 1 0 120 KDa Rickettsia surface antigen DPPIV_rep PF18811.1 ORF110471 - 1.2 9.1 0.0 1.2 9.1 0.0 3.0 3 0 0 3 3 3 0 Dipeptidyl peptidase IV (DPP IV) low complexity region Asp PF00026.23 ORF104506 - 1.2e-21 77.5 0.1 1.6e-21 77.0 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF104506 - 0.0028 17.5 0.0 0.0051 16.6 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Shisa PF13908.6 ORF104506 - 0.016 15.5 0.0 0.037 14.3 0.0 1.5 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator MFS_1 PF07690.16 ORF95111 - 3.8e-26 91.9 23.8 5.6e-26 91.3 23.8 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF95111 - 0.0029 16.5 7.5 0.0029 16.5 7.5 2.6 2 1 0 2 2 2 1 Sugar (and other) transporter GSH_synth_ATP PF03917.17 ORF92493 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF92493 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF92493 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GSH_synth_ATP PF03917.17 ORF91103 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF91103 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF91103 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GSH_synth_ATP PF03917.17 ORF89340 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF89340 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF89340 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GSH_synth_ATP PF03917.17 ORF8864 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF8864 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF8864 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus PAF-AH_p_II PF03403.13 ORF83196 - 8.4e-27 93.7 5.9 6.6e-25 87.4 5.9 2.2 1 1 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II Hydrolase_4 PF12146.8 ORF83196 - 6.7e-07 28.8 0.0 6.1e-05 22.4 0.0 2.2 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF83196 - 2.2e-05 24.3 0.0 3.1e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Chlorophyllase2 PF12740.7 ORF83196 - 3.5e-05 22.8 0.1 5.7e-05 22.2 0.1 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme Esterase PF00756.20 ORF83196 - 0.00031 20.5 0.0 0.00056 19.6 0.0 1.4 1 0 0 1 1 1 1 Putative esterase Abhydrolase_6 PF12697.7 ORF83196 - 0.00071 20.2 0.0 0.00097 19.8 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF83196 - 0.00092 18.7 0.0 0.0016 17.9 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family LIDHydrolase PF10230.9 ORF83196 - 0.0098 15.5 0.0 0.016 14.7 0.0 1.5 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Abhydrolase_2 PF02230.16 ORF83196 - 0.03 14.1 0.0 0.058 13.2 0.0 1.4 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase Chlorophyllase PF07224.11 ORF83196 - 0.083 11.9 0.0 4.6 6.2 0.0 2.3 2 0 0 2 2 2 0 Chlorophyllase GSH_synth_ATP PF03917.17 ORF7249 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF7249 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF7249 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus DUF1298 PF06974.13 ORF69478 - 1.4e-10 41.3 0.1 2.6e-10 40.4 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF69478 - 3.2e-09 37.0 0.0 4.8e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 ORF69478 - 0.029 13.1 0.2 0.051 12.2 0.2 1.3 1 0 0 1 1 1 0 Condensation domain Aldo_ket_red PF00248.21 ORF69043 - 6.2e-25 88.0 0.0 1e-24 87.3 0.0 1.3 1 0 0 1 1 1 1 Aldo/keto reductase family GSH_synth_ATP PF03917.17 ORF64568 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF64568 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF64568 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Piezo_RRas_bdg PF12166.8 ORF58579 - 2.6e-80 270.8 0.0 3e-80 270.6 0.0 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF3085 PF11284.8 ORF58579 - 0.019 15.3 0.0 0.044 14.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3085) TackOD1 PF18551.1 ORF50566 - 0.33 10.6 0.0 0.33 10.6 0.0 2.9 3 0 0 3 3 3 0 Thaumarchaeal output domain 1 MMR_HSR1 PF01926.23 ORF468 - 2.5e-08 34.0 0.0 7e-08 32.6 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF468 - 4.7e-06 26.6 0.2 0.0002 21.3 0.1 2.5 2 1 0 2 2 2 1 RsgA GTPase Gtr1_RagA PF04670.12 ORF468 - 1.3e-05 24.7 0.0 2.3e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region AIG1 PF04548.16 ORF468 - 5e-05 22.7 0.0 0.00011 21.7 0.0 1.6 1 1 0 1 1 1 1 AIG1 family AAA_33 PF13671.6 ORF468 - 0.0013 18.9 0.0 0.004 17.3 0.0 1.9 1 0 0 1 1 1 1 AAA domain FeoB_N PF02421.18 ORF468 - 0.0014 18.2 0.0 0.0022 17.5 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Septin PF00735.18 ORF468 - 0.0016 17.8 0.0 0.017 14.4 0.0 2.3 2 0 0 2 2 2 1 Septin Dynamin_N PF00350.23 ORF468 - 0.0063 16.6 0.7 0.078 13.0 0.0 2.7 2 1 1 3 3 3 1 Dynamin family SRPRB PF09439.10 ORF468 - 0.013 14.9 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF468 - 0.015 15.6 0.1 0.058 13.7 0.1 2.1 1 1 0 1 1 1 0 AAA domain ADK PF00406.22 ORF468 - 0.023 14.8 0.1 0.14 12.2 0.1 2.1 1 1 0 1 1 1 0 Adenylate kinase Roc PF08477.13 ORF468 - 0.033 14.4 0.0 0.15 12.3 0.0 2.2 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 ORF468 - 0.044 14.3 0.1 0.17 12.4 0.0 2.2 2 1 0 2 2 2 0 ABC transporter Ras PF00071.22 ORF468 - 0.053 13.1 0.0 0.13 11.9 0.0 1.8 1 1 0 1 1 1 0 Ras family ATP_bind_1 PF03029.17 ORF468 - 0.098 12.4 2.6 2.6 7.8 0.1 2.6 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein AMP-binding PF00501.28 ORF46501 - 7.8e-35 120.3 0.1 1.1e-34 119.8 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Aa_trans PF01490.18 ORF46042 - 2.2e-48 165.0 26.8 2.6e-48 164.7 26.8 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF46042 - 4.6e-10 39.1 23.5 1.2e-09 37.7 23.5 1.7 1 1 0 1 1 1 1 Tryptophan/tyrosine permease family Cytochrom_B_C PF00032.17 ORF46042 - 0.26 11.6 12.9 2.2 8.6 0.4 4.4 3 1 1 4 4 4 0 Cytochrome b(C-terminal)/b6/petD DUF4311 PF14188.6 ORF46042 - 1.7 8.4 8.9 0.17 11.6 3.1 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4311) GSH_synth_ATP PF03917.17 ORF45816 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF45816 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF45816 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Peptidase_S10 PF00450.22 ORF43693 - 3e-102 343.2 3.9 3.5e-102 342.9 3.9 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase DUF1283 PF06932.11 ORF43693 - 0.16 12.2 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) Peptidase_S28 PF05577.12 ORF39057 - 2.3e-74 250.8 7.5 3.3e-74 250.2 7.5 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF39057 - 0.042 13.3 0.1 0.072 12.5 0.1 1.5 1 0 0 1 1 1 0 Prolyl oligopeptidase family Peptidase_C2 PF00648.21 ORF37656 - 2.5e-77 259.8 0.7 3.7e-77 259.3 0.7 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease GSH_synth_ATP PF03917.17 ORF35889 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF35889 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF35889 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus 3D PF06725.11 ORF29310 - 0.042 14.0 0.1 0.086 13.0 0.1 1.4 1 0 0 1 1 1 0 3D domain DUF948 PF06103.11 ORF29310 - 0.044 14.1 0.1 0.094 13.0 0.1 1.5 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Peptidase_S10 PF00450.22 ORF25919 - 3e-102 343.2 3.9 3.5e-102 342.9 3.9 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase DUF1283 PF06932.11 ORF25919 - 0.16 12.2 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) ERG4_ERG24 PF01222.17 ORF2211 - 9.4e-66 222.3 14.7 1.4e-42 146.0 9.4 2.0 2 0 0 2 2 2 2 Ergosterol biosynthesis ERG4/ERG24 family DUF1295 PF06966.12 ORF2211 - 0.00036 20.1 1.5 0.0012 18.4 1.5 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) Na_Ala_symp PF01235.17 ORF21136 - 6.8e-142 473.4 25.1 8e-142 473.2 25.1 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family EMP70 PF02990.16 ORF21136 - 0.0016 17.2 2.5 0.0016 17.2 2.5 2.4 2 1 1 3 3 3 1 Endomembrane protein 70 GSH_synth_ATP PF03917.17 ORF18518 - 1e-78 264.8 0.1 1.2e-78 264.6 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF18518 - 2.2e-32 111.5 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF18518 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Asp PF00026.23 ORF17500 - 2.6e-23 82.9 0.4 3.7e-23 82.4 0.4 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF17500 - 0.0023 17.7 0.0 0.005 16.6 0.0 1.5 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Shisa PF13908.6 ORF17500 - 0.018 15.3 0.0 0.036 14.3 0.0 1.4 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator GSH_synth_ATP PF03917.17 ORF1650 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF1650 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF1650 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus AdoHcyase PF05221.17 ORF151867 - 1.5e-136 454.5 0.0 1.7e-136 454.3 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 ORF151867 - 5.4e-80 267.2 1.7 9.1e-80 266.4 1.7 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 ORF151867 - 1e-07 31.5 0.1 2.1e-07 30.5 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 ORF151867 - 0.0011 18.6 0.0 0.0021 17.7 0.0 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain THF_DHG_CYH_C PF02882.19 ORF151867 - 0.019 14.3 0.7 0.074 12.4 0.7 1.9 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aminotran_5 PF00266.19 ORF151867 - 0.11 11.5 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class-V NAD_binding_7 PF13241.6 ORF151867 - 0.15 12.5 0.2 0.37 11.2 0.2 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding ERG4_ERG24 PF01222.17 ORF14906 - 9.4e-66 222.3 14.7 1.4e-42 146.0 9.4 2.0 2 0 0 2 2 2 2 Ergosterol biosynthesis ERG4/ERG24 family DUF1295 PF06966.12 ORF14906 - 0.00036 20.1 1.5 0.0012 18.4 1.5 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) GSH_synth_ATP PF03917.17 ORF141566 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF141566 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF141566 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GSH_synth_ATP PF03917.17 ORF13828 - 4.2e-80 269.3 0.1 4.9e-80 269.1 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF13828 - 2.2e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF13828 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GSH_synth_ATP PF03917.17 ORF137437 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF137437 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF137437 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Glyco_hydro_31 PF01055.26 ORF135936 - 5.4e-74 250.0 2.5 6.5e-74 249.7 2.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Peptidase_S10 PF00450.22 ORF132962 - 5.8e-102 342.2 4.0 6.8e-102 342.0 4.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase DUF1283 PF06932.11 ORF132962 - 0.16 12.2 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) Asp PF00026.23 ORF132603 - 1.4e-19 70.7 0.1 3.1e-19 69.6 0.0 1.5 2 0 0 2 2 2 1 Eukaryotic aspartyl protease Shisa PF13908.6 ORF132603 - 0.035 14.4 0.0 0.063 13.5 0.0 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator PKcGMP_CC PF16808.5 ORF128775 - 0.15 11.9 0.6 0.36 10.7 0.6 1.6 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DIRP PF06584.13 ORF128775 - 0.35 11.1 2.4 7.6 6.8 0.1 2.5 2 0 0 2 2 2 0 DIRP Pkinase PF00069.25 ORF127684 - 1.2e-63 214.9 0.1 1.8e-63 214.4 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF127684 - 4.7e-47 160.4 0.0 7e-47 159.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF127684 - 1.8e-08 34.0 0.0 6.3e-08 32.3 0.0 1.9 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF127684 - 0.0014 17.5 0.0 0.0072 15.2 0.0 1.9 2 0 0 2 2 2 1 Fungal protein kinase RIO1 PF01163.22 ORF127684 - 0.0041 16.8 0.1 0.011 15.4 0.1 1.7 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 ORF127684 - 0.0061 15.9 0.0 0.012 15.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF127684 - 0.01 15.5 1.1 0.57 9.8 0.1 2.3 1 1 1 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF127684 - 0.015 14.2 0.1 0.036 13.0 0.1 1.6 1 0 0 1 1 1 0 Haspin like kinase domain AMP-binding PF00501.28 ORF12688 - 7.8e-35 120.3 0.1 1.1e-34 119.8 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme GSH_synth_ATP PF03917.17 ORF123054 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF123054 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF123054 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Asp PF00026.23 ORF122293 - 1.4e-19 70.7 0.1 3.1e-19 69.6 0.0 1.5 2 0 0 2 2 2 1 Eukaryotic aspartyl protease Shisa PF13908.6 ORF122293 - 0.034 14.4 0.0 0.061 13.6 0.0 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator ubiquitin PF00240.23 ORF120935 - 1.3e-07 31.3 0.0 3.9e-07 29.7 0.0 1.8 2 0 0 2 2 2 1 Ubiquitin family SK_channel PF03530.14 ORF113217 - 3.5e-08 33.4 0.9 8.1e-08 32.3 0.9 1.6 1 0 0 1 1 1 1 Calcium-activated SK potassium channel Ion_trans_2 PF07885.16 ORF113217 - 4.6e-07 29.7 5.4 4.6e-07 29.7 5.4 2.0 2 0 0 2 2 2 1 Ion channel Ion_trans PF00520.31 ORF113217 - 6e-07 28.9 16.2 9.8e-07 28.2 16.2 1.3 1 0 0 1 1 1 1 Ion transport protein Med9 PF07544.13 ORF113217 - 0.054 13.6 0.3 0.25 11.5 0.3 2.0 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Pox_A_type_inc PF04508.12 ORF113217 - 0.2 11.5 1.6 0.51 10.3 1.6 1.7 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat Metalloenzyme PF01676.18 ORF108940 - 2e-32 112.5 0.0 3.2e-32 111.9 0.0 1.3 1 1 0 1 1 1 1 Metalloenzyme superfamily SIS_2 PF13580.6 ORF108940 - 0.056 13.5 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 SIS domain DUF1421 PF07223.11 ORF108940 - 0.81 9.6 3.6 1.8 8.5 0.2 2.8 3 0 0 3 3 3 0 UBA-like domain (DUF1421) GSH_synth_ATP PF03917.17 ORF100388 - 1.6e-81 274.0 0.1 1.8e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 ORF100388 - 2.1e-32 111.6 0.3 4.7e-32 110.5 0.3 1.6 1 0 0 1 1 1 1 Eukaryotic glutathione synthase Dala_Dala_lig_C PF07478.13 ORF100388 - 0.0036 16.9 0.0 0.007 15.9 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus DnaJ PF00226.31 ORF84418 - 1.3e-09 38.1 0.4 4.2e-09 36.4 0.2 2.1 2 0 0 2 2 2 1 DnaJ domain HNF-1A_C PF04813.12 ORF84418 - 0.097 13.5 7.1 0.37 11.6 7.1 2.0 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminus p450 PF00067.22 ORF78588 - 3.6e-51 174.4 0.3 4.8e-51 173.9 0.3 1.1 1 0 0 1 1 1 1 Cytochrome P450 Nop PF01798.18 ORF76763 - 3.7e-82 275.2 1.0 3.7e-82 275.2 1.0 1.9 2 0 0 2 2 2 1 snoRNA binding domain, fibrillarin NOP5NT PF08156.13 ORF76763 - 0.13 12.6 0.0 0.13 12.6 0.0 2.6 2 0 0 2 2 2 0 NOP5NT (NUC127) domain Trypan_PARP PF05887.11 ORF76763 - 0.15 12.1 18.6 0.26 11.3 18.6 1.4 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) RNA_polI_A34 PF08208.11 ORF76763 - 2.3 8.3 42.6 6.4 6.8 41.8 2.0 1 1 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF2201_N PF13203.6 ORF76763 - 2.3 7.7 11.1 4.2 6.9 11.1 1.4 1 0 0 1 1 1 0 Putative metallopeptidase domain DnaJ PF00226.31 ORF75255 - 1.3e-09 38.1 0.4 4.2e-09 36.4 0.2 2.1 2 0 0 2 2 2 1 DnaJ domain HNF-1A_C PF04813.12 ORF75255 - 0.097 13.5 7.1 0.37 11.6 7.1 2.0 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminus cobW PF02492.19 ORF6783 - 7.5e-52 175.5 1.7 1e-51 175.0 1.7 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF6783 - 8.4e-12 44.9 0.0 1.7e-11 43.9 0.0 1.5 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 ORF6783 - 2.1e-05 24.5 0.2 0.087 12.7 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase ABC_tran PF00005.27 ORF6783 - 0.016 15.7 0.0 0.037 14.6 0.0 1.7 1 0 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 ORF6783 - 0.021 15.2 0.0 0.049 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 ORF6783 - 0.027 14.5 0.1 0.056 13.4 0.1 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_23 PF13476.6 ORF6783 - 0.05 14.1 0.1 0.13 12.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 ORF6783 - 0.081 12.0 0.1 0.18 10.8 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.6 ORF6783 - 0.12 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 ORF6783 - 0.13 12.2 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea MMR_HSR1 PF01926.23 ORF6783 - 0.16 12.0 0.2 0.48 10.5 0.2 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase Arf PF00025.21 ORF6783 - 0.19 11.2 0.9 12 5.3 0.1 2.3 2 0 0 2 2 2 0 ADP-ribosylation factor family AAA_29 PF13555.6 ORF6783 - 0.2 11.4 0.0 0.52 10.1 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain PAN_1 PF00024.26 ORF65859 - 3.3e-10 39.8 11.3 1.6e-07 31.2 3.9 2.5 2 0 0 2 2 2 2 PAN domain PAN_4 PF14295.6 ORF65859 - 3.7e-06 26.7 9.0 0.0014 18.5 1.2 2.7 2 0 0 2 2 2 2 PAN domain Orthoreo_P10 PF07204.11 ORF65859 - 0.0037 17.2 0.1 0.0084 16.0 0.1 1.6 1 0 0 1 1 1 1 Orthoreovirus membrane fusion protein p10 PAN_2 PF08276.11 ORF65859 - 0.016 15.3 8.7 0.13 12.4 2.1 2.6 2 0 0 2 2 2 0 PAN-like domain LAX PF15681.5 ORF65859 - 0.025 13.4 0.1 2.4 6.9 0.0 2.1 2 0 0 2 2 2 0 Lymphocyte activation family X LST1 PF05083.13 ORF65859 - 0.025 14.8 0.0 0.057 13.7 0.0 1.6 1 0 0 1 1 1 0 LST-1 protein EphA2_TM PF14575.6 ORF65859 - 0.052 14.4 0.0 0.1 13.5 0.0 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain PAN_3 PF08277.12 ORF65859 - 0.36 10.7 5.7 1.3 8.9 0.8 2.4 2 0 0 2 2 2 0 PAN-like domain zf-C2H2_11 PF16622.5 ORF48265 - 0.0011 18.6 0.4 0.0029 17.3 0.4 1.6 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2 PF00096.26 ORF48265 - 0.002 18.5 0.2 0.0063 16.9 0.2 1.9 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF48265 - 0.017 15.9 0.2 0.017 15.9 0.2 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger RDM PF11002.8 ORF48265 - 0.15 12.1 0.5 0.36 10.9 0.5 1.6 1 0 0 1 1 1 0 RFPL defining motif (RDM) Apolipoprotein PF01442.18 ORF4626 - 0.12 12.2 9.1 0.033 14.1 1.0 3.0 3 0 0 3 3 3 0 Apolipoprotein A1/A4/E domain Fzo_mitofusin PF04799.13 ORF4626 - 0.18 11.3 8.4 4.2 6.9 3.2 3.0 1 1 0 2 2 2 0 fzo-like conserved region Mnd1 PF03962.15 ORF4626 - 0.62 10.4 5.9 11 6.4 0.0 3.9 4 0 0 4 4 4 0 Mnd1 HTH domain DUF1664 PF07889.12 ORF4626 - 0.72 9.9 26.5 0.32 11.0 6.2 4.9 3 1 1 5 5 5 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 ORF4626 - 1.2 9.2 21.8 0.82 9.7 1.1 4.1 2 1 3 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1548 PF07579.11 ORF4626 - 3.1 8.1 15.0 0.28 11.5 4.2 3.3 2 2 1 3 3 3 0 Domain of Unknown Function (DUF1548) Exonuc_VII_L PF02601.15 ORF4626 - 3.9 6.9 17.5 9e+03 -4.1 17.5 3.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit TBCC PF07986.12 ORF43690 - 5.4e-39 132.6 0.3 9.9e-39 131.8 0.3 1.5 1 0 0 1 1 1 1 Tubulin binding cofactor C Clathrin_lg_ch PF01086.17 ORF43690 - 4.3e-08 33.5 27.7 4.3e-08 33.5 27.7 2.1 2 1 0 2 2 2 1 Clathrin light chain Paz_1 PF18349.1 ORF43690 - 0.21 11.6 4.1 0.11 12.5 1.5 1.9 2 0 0 2 2 2 0 PAZ domain Hexokinase_2 PF03727.16 ORF142531 - 0.11 12.0 0.3 0.16 11.4 0.3 1.3 1 0 0 1 1 1 0 Hexokinase HECT PF00632.25 ORF128831 - 6.5e-50 170.3 2.5 9.3e-50 169.8 2.5 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Phe_ZIP PF08916.11 ORF123786 - 0.18 12.5 2.4 1.8 9.3 0.2 2.3 2 0 0 2 2 2 0 Phenylalanine zipper AMPK1_CBM PF16561.5 ORF121769 - 0.0022 18.2 0.1 0.062 13.5 0.0 2.5 2 0 0 2 2 2 1 Glycogen recognition site of AMP-activated protein kinase Lentiviral_Tat PF02998.14 ORF121769 - 0.098 12.7 0.3 8.5 6.5 0.0 2.5 2 0 0 2 2 2 0 Lentiviral Tat protein DEAD PF00270.29 ORF106634 - 1.4e-26 93.3 0.2 3.4e-26 92.1 0.1 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF106634 - 7.2e-24 84.3 0.2 2.4e-23 82.6 0.2 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF106634 - 2e-07 31.2 7.8 2.4e-07 30.9 0.3 2.7 2 1 1 3 3 3 2 Type III restriction enzyme, res subunit AAA_30 PF13604.6 ORF106634 - 0.007 16.1 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain FKBP26_C PF18046.1 ORF106634 - 0.16 12.1 4.7 0.12 12.4 1.2 2.8 3 0 0 3 3 3 0 FKBP26_C-terminal C2 PF00168.30 ORF103191 - 4.4e-17 62.2 0.1 6.5e-11 42.4 0.0 2.6 2 1 0 2 2 2 2 C2 domain Ferlin_C PF16165.5 ORF103191 - 0.0017 18.3 0.0 0.019 14.9 0.0 2.1 2 0 0 2 2 2 1 Ferlin C-terminus GTP_EFTU PF00009.27 ORF97704 - 7.2e-44 149.7 0.1 1e-43 149.2 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF97704 - 7.5e-14 52.0 0.0 1.3e-12 48.1 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF97704 - 4.2e-12 46.3 0.1 5.6e-11 42.7 0.0 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF97704 - 0.00074 19.6 0.4 0.013 15.6 0.1 2.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 ORF97704 - 0.0021 17.9 0.1 0.0071 16.2 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Dynamin_N PF00350.23 ORF97704 - 0.17 11.9 0.1 62 3.6 0.1 3.1 3 0 0 3 3 3 0 Dynamin family Metallophos PF00149.28 ORF94967 - 6.2e-10 39.9 1.5 9.6e-10 39.3 1.5 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Sec23_trunk PF04811.15 ORF94147 - 5.1e-09 36.1 0.2 3.6e-08 33.3 0.2 2.2 1 1 0 1 1 1 1 Sec23/Sec24 trunk domain VWA_2 PF13519.6 ORF94147 - 0.0015 19.1 0.2 0.095 13.4 0.0 3.4 3 1 0 3 3 3 1 von Willebrand factor type A domain ARID PF01388.21 ORF94147 - 0.021 15.5 0.0 0.07 13.8 0.0 2.0 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain Sec23_BS PF08033.12 ORF94147 - 0.095 13.5 0.0 0.22 12.3 0.0 1.7 1 0 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain HMG_box PF00505.19 ORF88652 - 4.8e-17 62.1 7.7 4.8e-17 62.1 7.7 3.0 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF88652 - 3.6e-11 43.5 7.7 3.6e-11 43.5 7.7 3.9 4 0 0 4 4 4 1 HMG-box domain GCFC PF07842.12 ORF87176 - 5.4e-56 190.2 6.3 5.4e-56 190.2 6.3 1.6 2 0 0 2 2 2 1 GC-rich sequence DNA-binding factor-like protein Pkinase PF00069.25 ORF81108 - 4.8e-61 206.4 4.0 6.8e-61 205.9 4.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF81108 - 3.4e-42 144.5 0.9 5e-42 144.0 0.9 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF81108 - 2.8e-10 40.0 0.5 1.2e-09 37.9 0.1 2.2 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF81108 - 0.00011 21.2 0.2 0.00011 21.2 0.2 2.1 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF81108 - 0.031 13.6 0.9 0.074 12.4 0.9 1.7 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Asp PF00026.23 ORF79549 - 8.5e-21 74.7 0.1 1.2e-20 74.2 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF79549 - 0.0066 16.2 0.0 0.015 15.1 0.0 1.6 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal TolA_bind_tri PF16331.5 ORF73040 - 0.033 14.3 0.1 0.067 13.3 0.1 1.4 1 0 0 1 1 1 0 TolA binding protein trimerisation GrpE PF01025.19 ORF73040 - 0.32 10.6 1.4 0.55 9.9 1.4 1.3 1 0 0 1 1 1 0 GrpE FAM150 PF15129.6 ORF65648 - 0.013 15.6 0.3 0.026 14.7 0.3 1.4 1 0 0 1 1 1 0 FAM150 family Complex1_51K PF01512.17 ORF64952 - 1.3e-44 151.7 0.0 2.3e-44 150.9 0.0 1.4 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit NADH_4Fe-4S PF10589.9 ORF64952 - 1e-31 108.8 0.1 1.8e-31 108.0 0.1 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SLBB PF10531.9 ORF64952 - 1.7e-09 37.4 0.0 3.1e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 SLBB domain cobW PF02492.19 ORF59940 - 8.5e-53 178.6 0.7 1.1e-52 178.2 0.7 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF59940 - 2.5e-23 81.8 0.0 6.6e-23 80.4 0.0 1.7 2 0 0 2 2 2 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 ORF59940 - 0.0016 18.4 0.0 1.1 9.2 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase MobB PF03205.14 ORF59940 - 0.032 14.1 0.0 0.054 13.4 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B MeaB PF03308.16 ORF59940 - 0.037 13.0 0.0 0.14 11.1 0.0 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TsaE PF02367.17 ORF59940 - 0.039 14.0 0.0 0.079 13.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 ORF59940 - 0.084 13.4 0.1 0.17 12.4 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 ORF59940 - 0.084 13.0 0.1 0.17 12.0 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF59940 - 0.091 13.1 0.0 0.15 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain EF-hand_6 PF13405.6 ORF59197 - 0.00062 19.5 0.0 0.002 17.9 0.0 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF59197 - 0.00086 19.7 0.0 0.011 16.2 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF59197 - 0.012 15.1 0.0 0.043 13.4 0.0 2.0 1 0 0 1 1 1 0 EF hand NOG1_N PF17835.1 ORF59197 - 0.36 10.8 4.3 2.5 8.0 0.1 2.6 1 1 1 2 2 2 0 NOG1 N-terminal helical domain CBFD_NFYB_HMF PF00808.23 ORF59197 - 6.8 7.1 12.4 2.5e+02 2.1 14.0 2.9 2 1 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Abhydrolase_3 PF07859.13 ORF36664 - 7.4e-41 140.3 0.0 1e-40 139.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF36664 - 0.00021 20.3 0.3 0.00059 18.8 0.0 1.8 2 0 0 2 2 2 1 Steryl acetyl hydrolase COesterase PF00135.28 ORF36664 - 0.00079 18.4 2.3 0.23 10.3 0.0 2.2 1 1 1 2 2 2 2 Carboxylesterase family DLH PF01738.18 ORF36664 - 0.0015 18.1 0.0 0.0028 17.2 0.0 1.4 1 0 0 1 1 1 1 Dienelactone hydrolase family Metallophos PF00149.28 ORF31829 - 4.3e-14 53.5 2.5 6.7e-14 52.9 2.5 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase HMG_box PF00505.19 ORF29286 - 4.8e-17 62.1 7.7 4.8e-17 62.1 7.7 3.0 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF29286 - 3.6e-11 43.5 7.7 3.6e-11 43.5 7.7 3.9 4 0 0 4 4 4 1 HMG-box domain DUF2935 PF11155.8 ORF29208 - 0.026 14.8 8.7 0.4 11.0 3.2 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) FtsK_alpha PF17854.1 ORF29208 - 0.027 14.6 1.2 0.28 11.3 0.0 2.9 2 2 0 2 2 2 0 FtsK alpha domain DUF1690 PF07956.11 ORF29208 - 0.4 11.1 12.7 1 9.8 8.8 2.6 2 0 0 2 2 2 0 Protein of Unknown function (DUF1690) ApoLp-III PF07464.11 ORF29208 - 0.46 10.6 8.3 3 7.9 0.7 2.8 2 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) FRB_dom PF08771.11 ORF29208 - 0.83 10.1 9.1 0.25 11.8 1.7 2.9 2 1 0 2 2 2 0 FKBP12-rapamycin binding domain Period_C PF12114.8 ORF29208 - 1.9 8.0 5.3 1.3 8.6 1.4 2.2 2 0 0 2 2 2 0 Period protein 2/3C-terminal region DUF5601 PF18151.1 ORF29208 - 2.1 8.7 7.3 2.2 8.6 0.4 3.5 2 1 0 3 3 3 0 Domain of unknown function (DUF5601) OmpH PF03938.14 ORF29208 - 2.4 8.5 20.1 13 6.1 0.4 2.7 2 1 0 2 2 2 0 Outer membrane protein (OmpH-like) Helicase_IV_N PF12462.8 ORF29208 - 3.4 7.6 6.9 4.9 7.1 0.7 2.3 2 0 0 2 2 2 0 DNA helicase IV / RNA helicase N terminal Fzo_mitofusin PF04799.13 ORF29208 - 4.8 6.7 7.5 2.6 7.6 4.1 2.1 2 0 0 2 2 2 0 fzo-like conserved region RCC1_2 PF13540.6 ORF26514 - 4.6e-11 42.2 37.9 0.32 10.9 0.1 10.4 10 1 0 10 10 10 6 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF26514 - 7.6e-05 23.0 8.1 18 5.8 0.0 7.7 3 2 6 9 9 9 1 TFIIH p62 subunit, N-terminal domain ubiquitin PF00240.23 ORF26514 - 0.012 15.4 0.0 0.033 13.9 0.0 1.8 1 1 0 1 1 1 0 Ubiquitin family Eno-Rase_NADH_b PF12242.8 ORF26514 - 0.089 12.6 9.0 0.39 10.5 0.1 5.2 2 2 6 8 8 8 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XRCC1_N PF01834.16 ORF26514 - 0.14 12.2 2.7 1.3e+02 2.5 0.0 5.1 2 1 4 7 7 7 0 XRCC1 N terminal domain Ysc84 PF04366.12 ORF26514 - 0.19 11.5 11.5 0.5 10.1 0.5 3.5 3 0 0 3 3 3 0 Las17-binding protein actin regulator Methyltransf_29 PF03141.16 ORF26514 - 0.32 9.5 2.2 40 2.6 0.1 4.1 5 0 0 5 5 5 0 Putative S-adenosyl-L-methionine-dependent methyltransferase TolA_bind_tri PF16331.5 ORF20012 - 0.033 14.3 0.1 0.067 13.3 0.1 1.4 1 0 0 1 1 1 0 TolA binding protein trimerisation GrpE PF01025.19 ORF20012 - 0.32 10.6 1.4 0.55 9.9 1.4 1.3 1 0 0 1 1 1 0 GrpE HATPase_c PF02518.26 ORF152940 - 5e-18 65.6 0.0 9.4e-18 64.8 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF152940 - 4.1e-11 42.7 0.2 9.8e-11 41.5 0.2 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 ORF152940 - 2.9e-09 37.2 0.1 1.6e-06 28.4 0.0 2.6 2 0 0 2 2 2 2 HAMP domain sCache_3_2 PF17203.4 ORF152940 - 1.2e-06 28.7 0.3 4.2e-06 26.9 0.0 2.1 2 0 0 2 2 2 1 Single cache domain 3 HATPase_c_5 PF14501.6 ORF152940 - 0.00039 20.3 0.0 0.00088 19.1 0.0 1.5 1 0 0 1 1 1 1 GHKL domain dCache_1 PF02743.18 ORF152940 - 0.0028 17.5 0.0 0.0062 16.4 0.0 1.5 1 0 0 1 1 1 1 Cache domain HATPase_c_3 PF13589.6 ORF152940 - 0.012 15.5 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF PF01590.26 ORF152940 - 0.021 15.4 0.0 0.073 13.7 0.0 1.9 1 0 0 1 1 1 0 GAF domain GAF_2 PF13185.6 ORF152940 - 0.032 14.5 0.0 0.16 12.3 0.0 2.1 2 0 0 2 2 2 0 GAF domain HATPase_c_2 PF13581.6 ORF152940 - 0.036 14.0 0.0 0.1 12.6 0.0 1.8 1 1 0 1 1 1 0 Histidine kinase-like ATPase domain NolV PF06635.12 ORF152940 - 0.045 13.1 0.4 0.081 12.3 0.4 1.3 1 0 0 1 1 1 0 Nodulation protein NolV GAF_3 PF13492.6 ORF152940 - 0.054 13.8 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 GAF domain RhoGAP PF00620.27 ORF151161 - 3.7 7.4 5.6 2.9 7.7 0.9 2.7 3 0 0 3 3 3 0 RhoGAP domain CHASE3 PF05227.13 ORF151161 - 3.7 7.4 7.5 13 5.6 0.5 3.3 4 0 0 4 4 4 0 CHASE3 domain ING PF12998.7 ORF151161 - 3.8 8.1 7.6 28 5.4 0.1 3.8 3 2 1 4 4 4 0 Inhibitor of growth proteins N-terminal histone-binding HNH_5 PF14279.6 ORF146133 - 0.001 18.9 0.1 0.0018 18.1 0.1 1.4 1 0 0 1 1 1 1 HNH endonuclease Asp PF00026.23 ORF134646 - 8.5e-21 74.7 0.1 1.2e-20 74.2 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF134646 - 0.0066 16.2 0.0 0.015 15.1 0.0 1.6 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Hydrolase_3 PF08282.12 ORF134590 - 0.003 17.3 0.0 0.0046 16.7 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF134590 - 0.032 14.5 0.4 4.3 7.6 0.0 3.0 2 2 1 3 3 3 0 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF134590 - 0.086 13.0 0.0 0.23 11.6 0.0 1.7 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase GTP_EFTU PF00009.27 ORF133559 - 7.2e-44 149.7 0.1 1e-43 149.2 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF133559 - 7.5e-14 52.0 0.0 1.3e-12 48.1 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF133559 - 4.2e-12 46.3 0.1 5.6e-11 42.7 0.0 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF133559 - 0.00074 19.6 0.4 0.013 15.6 0.1 2.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 ORF133559 - 0.0021 17.9 0.1 0.0071 16.2 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Dynamin_N PF00350.23 ORF133559 - 0.17 11.9 0.1 62 3.6 0.1 3.1 3 0 0 3 3 3 0 Dynamin family ROK PF00480.20 ORF132053 - 8e-96 321.0 0.0 9.5e-96 320.7 0.0 1.1 1 0 0 1 1 1 1 ROK family BcrAD_BadFG PF01869.20 ORF132053 - 0.17 11.3 0.0 3.9 6.9 0.0 2.1 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family Metallophos PF00149.28 ORF12988 - 4.2e-14 53.5 2.5 6.6e-14 52.9 2.5 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase AMPK1_CBM PF16561.5 ORF126669 - 2.7e-07 30.7 0.3 6e-07 29.6 0.3 1.7 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase MFS_1 PF07690.16 ORF124011 - 3.1e-32 111.9 24.0 3.6e-27 95.2 15.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF124011 - 0.001 18.0 10.7 0.001 18.0 10.7 4.0 2 2 2 4 4 4 3 Sugar (and other) transporter MFS_4 PF06779.14 ORF124011 - 0.011 15.1 11.7 0.016 14.5 5.3 2.3 2 1 0 2 2 2 0 Uncharacterised MFS-type transporter YbfB MFS_3 PF05977.13 ORF124011 - 2.2 6.6 14.9 0.028 12.8 2.1 2.9 3 0 0 3 3 3 0 Transmembrane secretion effector Ank_2 PF12796.7 ORF118151 - 1.6e-14 54.2 0.0 9e-05 23.0 0.0 4.0 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF118151 - 2.2e-14 53.6 0.1 5.2e-05 23.7 0.0 5.5 4 1 0 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF118151 - 1.1e-10 41.5 0.4 0.00086 19.6 0.0 4.9 5 0 0 5 5 5 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF118151 - 1.1e-06 28.4 2.6 0.016 15.7 0.0 5.3 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF118151 - 1e-05 25.7 0.1 0.023 15.1 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Metallophos PF00149.28 ORF11725 - 6.2e-10 39.9 1.5 9.6e-10 39.3 1.5 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Chloroa_b-bind PF00504.21 ORF116339 - 2e-52 178.0 5.5 6.5e-32 111.3 0.2 2.5 3 0 0 3 3 3 2 Chlorophyll A-B binding protein GTP_EFTU PF00009.27 ORF103405 - 7.2e-44 149.7 0.1 1e-43 149.2 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF103405 - 7.5e-14 52.0 0.0 1.3e-12 48.1 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF103405 - 4.2e-12 46.3 0.1 5.6e-11 42.7 0.0 2.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF103405 - 0.00074 19.6 0.4 0.013 15.6 0.1 2.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 ORF103405 - 0.0021 17.9 0.1 0.0071 16.2 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Dynamin_N PF00350.23 ORF103405 - 0.17 11.9 0.1 62 3.6 0.1 3.1 3 0 0 3 3 3 0 Dynamin family His_Phos_2 PF00328.22 ORF101266 - 1.7e-17 63.8 1.2 1.7e-14 54.0 0.8 2.7 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) HRG PF16954.5 ORF101266 - 0.072 13.5 0.6 0.19 12.2 0.6 1.7 1 0 0 1 1 1 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene Cornifin PF02389.15 NODE_9230_length_1420_cov_294.166065_g3440_i1reverse_frame_3 - 4.6e-06 26.9 17.7 0.0026 18.0 3.0 3.1 1 1 2 3 3 3 3 Cornifin (SPRR) family Ion_trans PF00520.31 ORF8878 - 1.3e-23 83.5 5.0 2e-23 82.9 5.0 1.3 1 0 0 1 1 1 1 Ion transport protein GPHH PF16905.5 ORF8878 - 4.7e-09 35.9 0.0 1e-08 34.8 0.0 1.6 1 0 0 1 1 1 1 Voltage-dependent L-type calcium channel, IQ-associated PKD_channel PF08016.12 ORF8878 - 0.005 15.6 4.6 0.0091 14.7 4.6 1.3 1 0 0 1 1 1 1 Polycystin cation channel EF-hand_1 PF00036.32 ORF8878 - 0.024 14.1 0.1 0.11 12.0 0.1 2.2 2 0 0 2 2 2 0 EF hand EF-hand_6 PF13405.6 ORF8878 - 0.054 13.4 0.2 0.38 10.8 0.1 2.5 2 0 0 2 2 2 0 EF-hand domain APC_N_CC PF16689.5 ORF88612 - 0.0019 18.2 1.9 0.0019 18.2 1.9 2.9 2 0 0 2 2 2 1 Coiled-coil N-terminus of APC, dimerisation domain TSC22 PF01166.18 ORF88612 - 0.092 13.1 4.6 2.2 8.6 0.7 3.0 2 0 0 2 2 2 0 TSC-22/dip/bun family NYD-SP28_assoc PF14775.6 ORF88612 - 0.33 11.1 4.8 1.8 8.7 1.0 2.6 2 0 0 2 2 2 0 Sperm tail C-terminal domain ABC_tran_CTD PF16326.5 ORF88612 - 0.71 10.2 6.6 1.7 8.9 6.1 2.0 1 1 0 1 1 1 0 ABC transporter C-terminal domain p450 PF00067.22 ORF84779 - 1.1e-49 169.4 0.6 1.6e-49 168.9 0.6 1.2 1 0 0 1 1 1 1 Cytochrome P450 SlyX PF04102.12 ORF82652 - 0.3 11.7 5.5 16 6.2 0.0 3.9 3 1 0 3 3 3 0 SlyX FBPase PF00316.20 ORF78417 - 7.3e-34 116.9 0.0 1.4e-33 115.9 0.0 1.5 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Rnk_N PF14760.6 ORF60695 - 9.3e-06 26.0 0.0 66 4.1 0.0 7.3 8 0 0 8 8 8 0 Rnk N-terminus DUF1192 PF06698.11 ORF60695 - 0.0011 19.0 12.2 15 5.7 0.1 7.7 8 0 0 8 8 8 1 Protein of unknown function (DUF1192) ATG16 PF08614.11 ORF60695 - 0.011 15.9 28.1 0.025 14.8 3.0 3.6 2 2 1 3 3 3 0 Autophagy protein 16 (ATG16) Ten1_2 PF15490.6 ORF60695 - 0.046 13.4 10.5 0.54 10.0 0.4 4.2 1 1 4 5 5 5 0 Telomere-capping, CST complex subunit DUF364 PF04016.12 ORF60695 - 0.29 10.7 2.3 89 2.6 0.0 4.6 3 3 2 5 5 5 0 Putative heavy-metal chelation RF3_C PF16658.5 ORF60695 - 0.43 10.4 4.1 59 3.5 0.0 5.1 6 0 0 6 6 6 0 Class II release factor RF3, C-terminal domain BRE1 PF08647.11 ORF60695 - 0.45 10.6 37.6 0.74 9.9 5.0 5.0 1 1 2 5 5 5 0 BRE1 E3 ubiquitin ligase KASH_CCD PF14662.6 ORF60695 - 0.57 10.0 29.4 1.1 9.0 0.4 3.6 1 1 2 4 4 4 0 Coiled-coil region of CCDC155 or KASH Spc7 PF08317.11 ORF60695 - 2.1 7.2 34.5 0.085 11.7 5.2 3.4 1 1 2 3 3 3 0 Spc7 kinetochore protein NPV_P10 PF05531.12 ORF60695 - 2.2 8.8 25.9 0.61 10.6 0.7 6.2 3 2 4 7 7 7 0 Nucleopolyhedrovirus P10 protein TMPIT PF07851.13 ORF60695 - 3.1 6.9 26.2 0.62 9.3 2.9 3.8 1 1 5 6 6 6 0 TMPIT-like protein Carbam_trans_C PF16861.5 ORF60104 - 6.1e-51 172.4 0.0 1.8e-50 170.9 0.0 1.6 2 0 0 2 2 2 1 Carbamoyltransferase C-terminus Carbam_trans_N PF02543.15 ORF60104 - 3.1e-08 33.7 0.0 9e-08 32.1 0.0 1.8 1 1 0 1 1 1 1 Carbamoyltransferase N-terminus TMEM43 PF07787.12 ORF52303 - 4.6e-25 88.4 0.0 7.4e-25 87.8 0.0 1.3 1 0 0 1 1 1 1 Transmembrane protein 43 ABC_export PF16962.5 ORF52303 - 0.51 8.7 6.1 0.77 8.1 6.1 1.2 1 0 0 1 1 1 0 Putative ABC exporter DUF4131 PF13567.6 ORF52303 - 1.3 8.7 3.5 2.6 7.7 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) PCI PF01399.27 ORF47827 - 2.8e-07 31.0 6.6 3.9e-06 27.3 6.6 2.5 1 1 0 1 1 1 1 PCI domain TPR_1 PF00515.28 ORF47827 - 0.022 14.6 0.3 0.16 11.9 0.2 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF47827 - 0.024 14.7 0.2 0.15 12.3 0.2 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Complex1_LYR_2 PF13233.6 ORF42173 - 0.016 16.0 1.1 0.1 13.3 0.1 2.4 2 0 0 2 2 2 0 Complex1_LYR-like Asp PF00026.23 ORF35474 - 6.9e-19 68.4 0.2 1e-18 67.9 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Shisa PF13908.6 ORF35474 - 0.0015 18.8 0.0 0.0028 17.9 0.0 1.4 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF1218 PF06749.12 ORF35474 - 0.07 13.7 0.2 0.15 12.6 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) Tweety PF04906.13 ORF35474 - 0.1 11.3 0.6 0.16 10.6 0.6 1.2 1 0 0 1 1 1 0 Tweety PTS_EIIC PF02378.18 ORF30552 - 1.9e-31 109.3 24.7 1.9e-31 109.3 24.7 1.8 2 0 0 2 2 2 1 Phosphotransferase system, EIIC PTS_EIIB PF00367.20 ORF30552 - 6.6e-11 41.5 0.1 1.2e-10 40.7 0.1 1.4 1 0 0 1 1 1 1 phosphotransferase system, EIIB DUF4044 PF13253.6 ORF30552 - 4.4 6.9 7.8 3.7 7.2 0.3 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4044) IBR PF01485.21 ORF29483 - 3e-07 30.6 28.8 8.7e-06 25.9 10.8 3.8 4 0 0 4 4 4 2 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF29483 - 0.15 12.4 31.2 0.096 13.0 12.0 3.8 3 0 0 3 3 3 0 Ring finger domain IBR PF01485.21 ORF152232 - 3e-07 30.6 28.8 8.7e-06 25.9 10.8 3.8 4 0 0 4 4 4 2 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF152232 - 0.15 12.4 31.2 0.096 13.0 12.0 3.8 3 0 0 3 3 3 0 Ring finger domain ZZ PF00569.17 ORF147243 - 6.5e-13 48.3 2.7 6.5e-13 48.3 2.7 1.8 2 0 0 2 2 2 1 Zinc finger, ZZ type PB1 PF00564.24 ORF147243 - 6.5e-12 45.2 0.0 1.6e-11 44.0 0.0 1.7 1 0 0 1 1 1 1 PB1 domain N_BRCA1_IG PF16158.5 ORF147243 - 2.1e-05 25.2 0.0 6.1e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene TehB PF03848.14 ORF147243 - 0.015 14.7 0.5 0.072 12.5 0.0 2.2 1 1 1 2 2 2 0 Tellurite resistance protein TehB ERCC3_RAD25_C PF16203.5 ORF147243 - 0.019 14.2 0.4 0.039 13.1 0.2 1.6 1 1 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase C1_2 PF03107.16 ORF147243 - 0.03 14.6 0.7 0.03 14.6 0.7 2.3 3 0 0 3 3 3 0 C1 domain HopJ PF08888.11 ORF147243 - 0.1 12.8 2.3 2.3 8.5 0.1 2.4 2 0 0 2 2 2 0 HopJ type III effector protein FAD_binding_7 PF03441.14 ORF137381 - 1.5e-85 285.8 3.4 2.6e-85 285.0 3.4 1.4 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.18 ORF137381 - 3.6e-47 160.4 0.4 8.2e-47 159.3 0.2 1.7 2 0 0 2 2 2 1 DNA photolyase DUF4918 PF16265.5 ORF136502 - 0.045 13.3 0.2 0.076 12.5 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) Aldo_ket_red PF00248.21 ORF135328 - 2.4e-18 66.3 0.1 8.1e-18 64.6 0.0 1.7 2 0 0 2 2 2 1 Aldo/keto reductase family Golgin_A5 PF09787.9 ORF131693 - 0.55 9.6 37.7 0.018 14.5 31.6 1.7 2 0 0 2 2 2 0 Golgin subfamily A member 5 FGGY_C PF02782.16 ORF130667 - 5e-23 81.9 0.0 7.9e-23 81.2 0.0 1.3 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 ORF130667 - 2e-14 53.7 0.0 8.4e-07 28.8 0.0 2.2 1 1 1 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain p450 PF00067.22 ORF129870 - 2e-45 155.4 0.1 2.6e-45 155.0 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Exog_C PF18026.1 ORF129870 - 0.092 12.8 0.3 0.31 11.1 0.3 1.9 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain DUF3135 PF11333.8 ORF129870 - 0.13 12.6 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) Pyr_redox_2 PF07992.14 ORF12674 - 1.7e-16 60.3 0.0 4.3e-16 59.0 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF12674 - 1.5e-11 44.7 0.0 1e-08 35.6 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF12674 - 0.0092 15.6 0.1 0.36 10.4 0.0 2.8 2 1 1 3 3 3 1 FAD dependent oxidoreductase DUF1188 PF06690.11 ORF12674 - 0.14 11.7 0.0 11 5.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1188) C2 PF00168.30 ORF124146 - 0.072 13.4 0.0 0.21 11.9 0.0 1.8 1 0 0 1 1 1 0 C2 domain p450 PF00067.22 ORF122666 - 2e-45 155.4 0.1 2.6e-45 155.0 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Exog_C PF18026.1 ORF122666 - 0.092 12.8 0.3 0.31 11.1 0.3 1.9 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain DUF3135 PF11333.8 ORF122666 - 0.13 12.6 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) DUF4749 PF15936.5 ORF122097 - 0.038 15.1 0.2 0.077 14.1 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4749) MFS_2 PF13347.6 ORF118830 - 3.2e-24 85.3 26.2 2.4e-19 69.2 5.4 2.1 2 0 0 2 2 2 2 MFS/sugar transport protein MFS_1 PF07690.16 ORF118830 - 6.5e-22 77.9 14.4 6.5e-22 77.9 14.4 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF1298 PF06974.13 ORF11669 - 2.9e-10 40.3 0.1 5.4e-10 39.4 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF11669 - 3.8e-10 40.0 0.0 5.6e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 ORF11669 - 0.1 11.2 0.1 0.15 10.7 0.1 1.3 1 0 0 1 1 1 0 Condensation domain Armet PF10208.9 ORF109959 - 6.4e-08 32.6 0.0 1.7e-07 31.3 0.0 1.6 1 0 0 1 1 1 1 Degradation arginine-rich protein for mis-folding SAP PF02037.27 ORF109959 - 0.057 13.2 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 SAP domain Pkinase PF00069.25 ORF99959 - 5.9e-52 176.6 0.6 1.2e-51 175.6 0.6 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF99959 - 1.5e-24 86.7 0.1 2.4e-24 86.0 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF99959 - 1.5e-06 27.9 0.2 3.4e-06 26.8 0.2 1.6 1 0 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF99959 - 0.0004 19.3 1.9 0.0011 17.8 1.9 1.6 1 1 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF99959 - 0.0017 17.7 0.1 0.095 12.0 0.0 2.3 2 0 0 2 2 2 1 Kinase-like FTA2 PF13095.6 ORF99959 - 0.0034 17.1 0.4 0.024 14.3 0.2 2.2 1 1 1 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF99959 - 0.036 14.0 0.1 0.2 11.6 0.1 1.9 1 1 1 2 2 2 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF99959 - 0.15 11.4 3.4 0.073 12.4 0.9 1.7 2 1 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Aldedh PF00171.22 ORF96396 - 1.7e-69 234.6 0.0 2.2e-69 234.1 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Yae1_N PF09811.9 ORF95061 - 0.2 11.4 0.2 0.36 10.6 0.2 1.4 1 0 0 1 1 1 0 Essential protein Yae1, N terminal GAS PF13851.6 ORF88034 - 1.6e-49 168.0 35.0 1.6e-49 168.0 35.0 3.3 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding PspA_IM30 PF04012.12 ORF88034 - 0.27 10.8 44.5 0.93 9.0 23.3 3.7 2 1 1 3 3 3 0 PspA/IM30 family Xrn1_D3 PF18194.1 ORF88034 - 0.32 11.1 4.7 7.6 6.7 1.4 3.1 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 CENP-F_leu_zip PF10473.9 ORF88034 - 0.5 10.4 72.7 0.037 14.0 12.1 4.7 2 1 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AhpC-TSA PF00578.21 ORF88034 - 0.96 9.4 11.1 0.079 12.9 0.8 3.3 3 1 0 3 3 3 0 AhpC/TSA family DUF5082 PF16888.5 ORF88034 - 2.4 8.5 59.7 0.087 13.1 9.1 5.5 2 2 4 6 6 6 0 Domain of unknown function (DUF5082) DUF4041 PF13250.6 ORF88034 - 6.2 6.8 17.5 2.1 8.3 0.0 5.0 5 0 0 5 5 5 0 Domain of unknown function (DUF4041) Asp PF00026.23 ORF83565 - 4.8e-22 78.8 0.0 1.1e-21 77.6 0.0 1.5 2 0 0 2 2 2 1 Eukaryotic aspartyl protease EphA2_TM PF14575.6 ORF83565 - 0.12 13.2 0.1 1.1 10.2 0.0 2.5 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain TMIE PF16038.5 ORF83565 - 0.15 11.9 0.7 0.29 11.0 0.7 1.4 1 0 0 1 1 1 0 TMIE protein GAS PF13851.6 ORF67593 - 1.6e-49 168.0 35.0 1.6e-49 168.0 35.0 3.3 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding PspA_IM30 PF04012.12 ORF67593 - 0.27 10.8 44.5 0.93 9.0 23.3 3.7 2 1 1 3 3 3 0 PspA/IM30 family Xrn1_D3 PF18194.1 ORF67593 - 0.32 11.1 4.7 7.6 6.7 1.4 3.1 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 CENP-F_leu_zip PF10473.9 ORF67593 - 0.5 10.4 72.7 0.037 14.0 12.1 4.7 2 1 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AhpC-TSA PF00578.21 ORF67593 - 0.96 9.4 11.1 0.079 12.9 0.8 3.3 3 1 0 3 3 3 0 AhpC/TSA family DUF5082 PF16888.5 ORF67593 - 2.4 8.5 59.7 0.087 13.1 9.1 5.5 2 2 4 6 6 6 0 Domain of unknown function (DUF5082) DUF4041 PF13250.6 ORF67593 - 6.2 6.8 17.5 2.1 8.3 0.0 5.0 5 0 0 5 5 5 0 Domain of unknown function (DUF4041) GAS PF13851.6 ORF50530 - 1.6e-49 168.0 35.0 1.6e-49 168.0 35.0 3.3 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding PspA_IM30 PF04012.12 ORF50530 - 0.27 10.8 44.5 0.93 9.0 23.3 3.7 2 1 1 3 3 3 0 PspA/IM30 family Xrn1_D3 PF18194.1 ORF50530 - 0.32 11.1 4.7 7.6 6.7 1.4 3.1 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 CENP-F_leu_zip PF10473.9 ORF50530 - 0.5 10.4 72.7 0.037 14.0 12.1 4.7 2 1 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AhpC-TSA PF00578.21 ORF50530 - 0.96 9.4 11.1 0.079 12.9 0.8 3.3 3 1 0 3 3 3 0 AhpC/TSA family DUF5082 PF16888.5 ORF50530 - 2.4 8.5 59.7 0.087 13.1 9.1 5.5 2 2 4 6 6 6 0 Domain of unknown function (DUF5082) DUF4041 PF13250.6 ORF50530 - 6.2 6.8 17.5 2.1 8.3 0.0 5.0 5 0 0 5 5 5 0 Domain of unknown function (DUF4041) DUF1104 PF06518.11 ORF39509 - 0.013 15.8 0.2 0.028 14.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) Metallophos PF00149.28 ORF20699 - 3.8e-06 27.6 0.2 6.5e-06 26.8 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF456 PF04306.13 ORF20699 - 0.017 15.4 4.9 0.031 14.6 4.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF456) ECF_trnsprt PF12822.7 ORF20699 - 0.08 13.0 0.5 0.12 12.4 0.1 1.5 2 0 0 2 2 2 0 ECF transporter, substrate-specific component TMEM144 PF07857.12 ORF20699 - 0.095 11.6 0.2 0.15 11.0 0.2 1.2 1 0 0 1 1 1 0 Transmembrane family, TMEM144 of transporters DUF2613 PF11021.8 ORF20699 - 0.35 11.0 1.7 31 4.8 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) ATPase_gene1 PF09527.10 ORF20699 - 1.8 8.8 9.5 9 6.6 9.5 2.1 1 1 0 1 1 1 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter PCI PF01399.27 ORF15582 - 4.3e-17 62.5 1.8 1.4e-16 60.9 0.6 2.4 2 0 0 2 2 2 1 PCI domain TPR_7 PF13176.6 ORF15582 - 0.011 15.6 1.8 4.8 7.4 0.1 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat CSN8_PSD8_EIF3K PF10075.9 ORF15582 - 0.043 13.8 1.4 0.15 12.1 0.2 2.3 1 1 1 2 2 2 0 CSN8/PSMD8/EIF3K family GAS PF13851.6 ORF142742 - 1.6e-49 168.0 35.0 1.6e-49 168.0 35.0 3.3 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding PspA_IM30 PF04012.12 ORF142742 - 0.27 10.8 44.5 0.93 9.0 23.3 3.7 2 1 1 3 3 3 0 PspA/IM30 family Xrn1_D3 PF18194.1 ORF142742 - 0.32 11.1 4.7 7.6 6.7 1.4 3.1 2 0 0 2 2 2 0 Exoribonuclease 1 Domain-3 CENP-F_leu_zip PF10473.9 ORF142742 - 0.5 10.4 72.7 0.037 14.0 12.1 4.7 2 1 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AhpC-TSA PF00578.21 ORF142742 - 0.96 9.4 11.1 0.079 12.9 0.8 3.3 3 1 0 3 3 3 0 AhpC/TSA family DUF5082 PF16888.5 ORF142742 - 2.4 8.5 59.7 0.087 13.1 9.1 5.5 2 2 4 6 6 6 0 Domain of unknown function (DUF5082) DUF4041 PF13250.6 ORF142742 - 6.2 6.8 17.5 2.1 8.3 0.0 5.0 5 0 0 5 5 5 0 Domain of unknown function (DUF4041) CRAL_TRIO PF00650.20 ORF142483 - 3.6e-28 98.3 0.0 6.7e-28 97.4 0.0 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF142483 - 4.1e-05 23.7 0.3 8.9e-05 22.6 0.3 1.6 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain DUF1104 PF06518.11 ORF13915 - 0.013 15.8 0.2 0.028 14.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) Pkinase PF00069.25 ORF136450 - 3.6e-79 265.8 1.6 4.2e-79 265.6 0.5 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF136450 - 3.1e-41 141.4 0.1 4.2e-41 141.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF136450 - 6.8e-28 94.1 8.9 1.5e-06 27.3 0.0 4.9 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF136450 - 7.8e-27 93.5 10.3 1.1e-13 51.4 0.8 3.5 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF136450 - 1e-22 79.7 12.6 2.9e-08 33.4 1.0 4.8 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF136450 - 1.8e-22 77.3 9.1 4.9e-07 29.2 0.1 4.9 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF136450 - 8e-20 69.4 16.1 4.4e-06 25.9 0.1 5.0 5 0 0 5 5 5 4 EF hand EF-hand_4 PF12763.7 ORF136450 - 1.8e-08 34.3 10.8 3.1e-05 23.9 0.4 4.0 3 1 1 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF136450 - 5e-08 33.3 0.7 0.0028 18.0 0.2 2.7 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF136450 - 0.00036 20.8 0.4 0.0014 18.9 0.1 2.2 2 0 0 2 2 2 1 EF-hand domain Kdo PF06293.14 ORF136450 - 0.00046 19.6 0.2 0.00079 18.8 0.2 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF136450 - 0.0034 16.7 0.0 0.0084 15.5 0.0 1.7 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF136450 - 0.015 15.2 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Phage_TAC_12 PF12363.8 ORF136450 - 0.057 13.8 2.1 0.23 11.9 0.3 2.8 2 1 1 3 3 3 0 Phage tail assembly chaperone protein, TAC Dockerin_1 PF00404.18 ORF136450 - 0.092 12.9 2.4 26 5.1 0.0 4.0 3 1 0 3 3 3 0 Dockerin type I domain YrbL-PhoP_reg PF10707.9 ORF136450 - 0.12 11.8 1.8 0.7 9.4 0.1 2.3 1 1 1 2 2 2 0 PhoP regulatory network protein YrbL Toprim_2 PF13155.6 ORF136450 - 0.14 12.6 2.5 25 5.4 0.0 3.9 2 1 2 4 4 4 0 Toprim-like GP3 PF03076.14 ORF122677 - 0.021 14.9 0.0 0.058 13.4 0.0 1.8 1 0 0 1 1 1 0 Equine arteritis virus GP3 DUF3860 PF12976.7 ORF122677 - 0.15 12.1 0.0 0.92 9.6 0.0 2.2 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3860) GTP_cyclohydro2 PF00925.20 ORF10905 - 1.7e-18 66.7 0.0 2.5e-18 66.2 0.0 1.2 1 0 0 1 1 1 1 GTP cyclohydrolase II GTP_CH_N PF12471.8 ORF10905 - 6.9e-12 45.5 0.1 3.1e-11 43.4 0.1 2.0 1 1 0 1 1 1 1 GTP cyclohydrolase N terminal DUF5608 PF18356.1 ORF10905 - 0.044 13.8 0.0 0.69 10.0 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5608) WES_acyltransf PF03007.16 ORF97179 - 1.9e-06 27.9 0.0 4.1e-06 26.8 0.0 1.5 2 0 0 2 2 2 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF97179 - 0.00099 19.1 0.0 0.0021 18.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Translin PF01997.16 ORF97179 - 0.014 15.4 0.2 0.025 14.6 0.2 1.4 1 0 0 1 1 1 0 Translin family Pox_J1 PF03338.15 ORF97179 - 0.14 12.0 2.5 0.3 10.9 0.5 2.6 4 0 0 4 4 4 0 Poxvirus J1 protein DUF2547 PF10818.8 ORF97179 - 0.15 13.0 0.0 0.37 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) Pkinase PF00069.25 ORF84291 - 3.6e-27 95.4 0.2 5.7e-27 94.7 0.2 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF84291 - 4.3e-16 59.0 0.0 5.7e-16 58.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF84291 - 5.5e-08 32.0 1.1 6.5e-08 31.8 0.1 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF84291 - 5.1e-06 26.6 0.0 0.00011 22.2 0.0 2.1 1 1 0 2 2 2 1 Phosphotransferase enzyme family ODV-E18 PF10717.9 ORF84291 - 0.0083 16.0 1.0 0.019 14.8 1.0 1.5 1 0 0 1 1 1 1 Occlusion-derived virus envelope protein ODV-E18 RimM PF01782.18 ORF75368 - 1.7e-08 34.6 1.3 2.9e-07 30.6 1.3 2.3 1 1 0 1 1 1 1 RimM N-terminal domain Oxysterol_BP PF01237.18 ORF7514 - 9.9e-40 136.5 1.0 1.8e-39 135.7 1.0 1.4 1 0 0 1 1 1 1 Oxysterol-binding protein DUF3378 PF11858.8 ORF7514 - 0.055 13.6 0.0 0.23 11.6 0.0 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3378) Imm45 PF15572.6 ORF7514 - 0.091 13.2 0.0 0.24 11.8 0.0 1.7 1 0 0 1 1 1 0 Immunity protein 45 VGCC_beta4Aa_N PF12052.8 ORF7514 - 9.8 6.4 6.6 10 6.3 0.1 2.4 2 0 0 2 2 2 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal ERGIC_N PF13850.6 ORF7270 - 0.12 12.7 0.4 0.88 10.0 0.1 2.5 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Conotoxin PF02950.17 ORF7270 - 0.16 13.0 1.4 0.45 11.6 0.0 2.4 3 0 0 3 3 3 0 Conotoxin ETRAMP PF09716.10 ORF7270 - 0.35 11.0 5.1 15 5.7 0.1 2.5 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) EF-hand_4 PF12763.7 ORF62965 - 2.7e-10 40.1 0.3 1.1e-09 38.2 0.0 2.1 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand EzrA PF06160.12 ORF62965 - 0.00018 19.9 11.0 0.00027 19.2 11.0 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA Bap31_Bap29_C PF18035.1 ORF62965 - 0.00052 20.0 0.5 0.0011 18.9 0.5 1.6 1 0 0 1 1 1 1 Bap31/Bap29 cytoplasmic coiled-coil domain Gp-FAR-1 PF05823.12 ORF62965 - 0.00066 20.1 7.0 0.0012 19.2 7.0 1.4 1 0 0 1 1 1 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) AidB_N PF18158.1 ORF62965 - 0.0056 16.6 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 Adaptive response protein AidB N-terminal domain Spc7 PF08317.11 ORF62965 - 0.0085 15.0 6.8 0.018 13.9 6.8 1.5 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF4201 PF13870.6 ORF62965 - 0.013 15.3 9.3 0.026 14.3 9.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) EF-hand_6 PF13405.6 ORF62965 - 0.019 14.9 0.1 0.057 13.4 0.1 1.9 1 1 0 1 1 1 0 EF-hand domain DUF948 PF06103.11 ORF62965 - 0.02 15.2 2.7 0.046 14.0 2.7 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) EF-hand_1 PF00036.32 ORF62965 - 0.028 14.0 0.3 0.18 11.4 0.0 2.3 2 0 0 2 2 2 0 EF hand IFT57 PF10498.9 ORF62965 - 0.032 13.2 12.2 0.057 12.4 12.2 1.3 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 FapA PF03961.13 ORF62965 - 0.036 12.7 8.2 0.049 12.2 8.2 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4407 PF14362.6 ORF62965 - 0.046 13.1 2.7 0.074 12.4 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF713 PF05218.14 ORF62965 - 0.06 13.1 5.5 0.13 12.0 5.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF713) HAUS-augmin3 PF14932.6 ORF62965 - 0.063 12.9 11.4 0.024 14.2 8.3 1.8 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 RasGAP_C PF03836.15 ORF62965 - 0.26 11.4 11.5 0.82 9.8 11.5 1.9 1 1 0 1 1 1 0 RasGAP C-terminus DUF2730 PF10805.8 ORF62965 - 0.29 11.2 2.3 0.64 10.1 2.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) Spectrin PF00435.21 ORF62965 - 0.49 10.9 7.2 0.28 11.7 4.2 2.2 2 1 0 2 2 1 0 Spectrin repeat EcoEI_R_C PF08463.10 ORF62965 - 0.54 10.4 4.6 0.16 12.1 1.2 1.8 2 0 0 2 2 2 0 EcoEI R protein C-terminal FAM76 PF16046.5 ORF62965 - 1.8 7.8 12.6 2.9 7.2 12.6 1.4 1 0 0 1 1 1 0 FAM76 protein TMPIT PF07851.13 ORF62965 - 2.8 7.1 9.9 4 6.6 9.1 1.6 1 1 0 1 1 1 0 TMPIT-like protein DUF745 PF05335.13 ORF62965 - 2.9 7.6 7.9 12 5.5 8.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF745) OmpH PF03938.14 ORF62965 - 3 8.2 12.2 1.7 9.0 9.5 1.9 2 0 0 2 2 1 0 Outer membrane protein (OmpH-like) Exonuc_VII_L PF02601.15 ORF62965 - 3 7.3 11.8 6 6.3 11.9 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF724 PF05266.14 ORF62965 - 4.3 7.1 8.9 11 5.8 8.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF62965 - 4.3 7.4 7.3 4 7.5 2.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Sec34 PF04136.15 ORF62965 - 6 6.7 11.7 2.4 8.0 6.2 2.5 2 1 0 2 2 2 0 Sec34-like family Prominin PF05478.11 ORF62965 - 6.8 4.5 13.4 13 3.6 13.4 1.4 1 0 0 1 1 1 0 Prominin DASH_Dad2 PF08654.10 ORF62965 - 8.7 6.8 10.2 0.25 11.8 2.3 2.5 3 0 0 3 3 2 0 DASH complex subunit Dad2 TMF_TATA_bd PF12325.8 ORF62965 - 9 6.6 14.5 2.5 8.3 9.6 2.5 2 1 0 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF3450 PF11932.8 ORF62965 - 9.4 5.5 10.7 33 3.7 10.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Laminin_II PF06009.12 ORF62965 - 9.9 6.2 15.6 2.3 8.3 11.4 2.0 2 0 0 2 2 2 0 Laminin Domain II p450 PF00067.22 ORF62429 - 1.3e-48 165.9 1.4 1.6e-48 165.6 1.4 1.0 1 0 0 1 1 1 1 Cytochrome P450 TPH PF13868.6 ORF59739 - 2.4e-24 85.5 132.1 2.4e-24 85.5 132.1 2.0 2 0 0 2 2 2 1 Trichohyalin-plectin-homology domain Radial_spoke PF04712.12 ORF57153 - 8.7e-68 229.4 5.5 2.8e-47 161.8 1.4 3.0 1 1 1 2 2 2 2 Radial spokehead-like protein DUF3038 PF11237.8 ORF57153 - 0.22 11.6 0.0 0.38 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks24.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks24.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks24.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks24.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:06:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Flp_C PF05202.12 ORF106214 - 0.059 12.9 0.1 0.066 12.7 0.1 1.1 1 0 0 1 1 1 0 Recombinase Flp protein zf-LITAF-like PF10601.9 ORF105021 - 3.7e-10 39.9 33.9 4.5e-10 39.6 33.9 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Phostensin_N PF13916.6 ORF103553 - 1.1 9.7 5.0 5.9 7.3 0.8 2.1 1 1 1 2 2 2 0 PP1-regulatory protein, Phostensin N-terminal DUF4633 PF15464.6 ORF103207 - 0.4 10.9 3.6 6.5 6.9 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4633) Acyl-CoA_dh_1 PF00441.24 ORF103052 - 7e-13 49.0 0.2 7.6e-13 48.9 0.2 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain TMEM192 PF14802.6 ORF103002 - 0.052 12.6 1.8 0.069 12.2 1.8 1.1 1 0 0 1 1 1 0 TMEM192 family ATP-synt_E_2 PF08112.11 ORF102882 - 0.0053 17.0 0.5 0.28 11.5 0.1 2.2 2 0 0 2 2 2 2 ATP synthase epsilon subunit Tricho_coat PF05892.11 ORF102882 - 0.031 14.0 0.1 0.059 13.1 0.0 1.4 1 1 0 1 1 1 0 Trichovirus coat protein PRANC PF09372.10 ORF102882 - 0.033 14.5 0.2 0.046 14.1 0.2 1.2 1 0 0 1 1 1 0 PRANC domain RRM_1 PF00076.22 ORF102863 - 1.1e-19 70.0 0.1 1.4e-19 69.6 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF102863 - 0.00034 20.6 0.1 0.00048 20.1 0.1 1.3 1 0 0 1 1 1 1 RNA binding motif RL PF17797.1 ORF102863 - 0.011 15.7 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 RL domain RRM_5 PF13893.6 ORF102863 - 0.033 13.8 0.0 0.039 13.5 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF102863 - 0.098 12.8 0.0 0.23 11.6 0.0 1.8 1 1 0 1 1 1 0 RNA recognition motif WD40 PF00400.32 ORF102725 - 0.038 14.9 0.9 0.071 14.0 0.9 1.7 1 1 0 1 1 1 0 WD domain, G-beta repeat Toxin_ToxA PF11584.8 ORF101907 - 0.068 13.2 0.4 0.12 12.3 0.2 1.5 1 1 0 1 1 1 0 Proteinaceous host-selective toxin ToxA Helo_like_N PF17111.5 ORF101797 - 0.036 13.4 0.4 0.04 13.3 0.4 1.2 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins Sugarporin_N PF11471.8 ORF101787 - 1.5 8.8 4.0 0.61 10.1 0.3 2.1 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension TcdA_TcdB_pore PF12920.7 ORF101787 - 4.2 5.5 10.5 4.4 5.4 10.5 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain CENP-T_C PF15511.6 ORF100105 - 8.4e-09 35.5 0.1 1e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF100105 - 3.5e-05 24.0 0.1 0.0001 22.5 0.0 1.8 1 1 1 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF PF02969.17 ORF100105 - 3.9e-05 23.7 0.1 5.7e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 ORF100105 - 7.1e-05 23.1 0.1 0.0001 22.6 0.1 1.4 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 ORF100105 - 0.00042 20.7 0.1 0.00051 20.4 0.1 1.2 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 ORF100105 - 0.0066 16.5 0.0 0.0086 16.1 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.13 ORF100105 - 0.16 12.5 0.1 0.23 12.0 0.1 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A Flavodoxin_5 PF12724.7 NODE_54964_length_316_cov_1.451957_g47031_i0reverse_frame_1 - 0.079 13.2 0.0 0.092 13.0 0.0 1.1 1 0 0 1 1 1 0 Flavodoxin domain DUF4769 PF15992.5 NODE_54945_length_316_cov_2.131673_g47012_i0forward_frame_1 - 0.43 10.3 2.6 0.49 10.2 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) PTPRCAP PF15713.5 NODE_54945_length_316_cov_2.131673_g47012_i0forward_frame_1 - 8 6.7 11.0 9.9 6.4 11.0 1.1 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated ARF7EP_C PF14949.6 NODE_54937_length_316_cov_2.512456_g47004_i0reverse_frame_1 - 0.055 14.1 0.1 0.073 13.7 0.1 1.3 1 0 0 1 1 1 0 ARF7 effector protein C-terminus Chorion_1 PF01723.16 NODE_54936_length_316_cov_2.512456_g47003_i0forward_frame_1 - 0.02 14.8 4.4 0.02 14.8 4.4 1.9 1 1 1 2 2 2 0 Chorion protein Lamprin PF06403.11 NODE_54936_length_316_cov_2.512456_g47003_i0forward_frame_1 - 5.4 7.0 21.6 0.36 10.8 11.6 2.6 1 1 1 2 2 2 0 Lamprin MFS_1 PF07690.16 NODE_54934_length_316_cov_2.693950_g47001_i0reverse_frame_1 - 8.5e-08 31.5 2.5 9.5e-08 31.3 2.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1430 PF07242.11 NODE_54934_length_316_cov_2.693950_g47001_i0reverse_frame_1 - 0.017 15.4 0.7 0.024 14.9 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) DUF4079 PF13301.6 NODE_54934_length_316_cov_2.693950_g47001_i0reverse_frame_1 - 0.042 14.0 0.1 0.052 13.7 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) ELH PF02323.15 NODE_54923_length_316_cov_4.106762_g46990_i0forward_frame_1 - 0.08 12.3 0.9 0.31 10.4 0.0 1.9 2 0 0 2 2 2 0 Egg-laying hormone precursor ABC_tran PF00005.27 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 4.8e-07 30.4 0.2 6.3e-07 30.0 0.2 1.3 1 1 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.0037 17.7 0.0 0.0043 17.4 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.0052 16.5 0.0 0.0075 16.0 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.0077 16.1 0.0 0.008 16.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.0095 16.2 0.0 0.011 16.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.019 15.1 0.1 0.024 14.7 0.1 1.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase cobW PF02492.19 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.025 14.2 0.1 0.033 13.8 0.1 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.026 15.0 0.2 0.046 14.2 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.03 14.5 0.0 0.037 14.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.036 13.1 0.1 0.043 12.9 0.1 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein Spore_IV_A PF09547.10 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.045 12.7 0.0 0.054 12.4 0.0 1.1 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) Dynamin_N PF00350.23 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.072 13.1 0.3 0.095 12.7 0.2 1.4 1 1 0 1 1 1 0 Dynamin family AAA_7 PF12775.7 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.076 12.5 0.0 0.091 12.3 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Adeno_IVa2 PF02456.15 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.082 11.7 0.0 0.087 11.6 0.0 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein Viral_helicase1 PF01443.18 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase NACHT PF05729.12 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.16 11.9 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 NACHT domain RsgA_GTPase PF03193.16 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.16 11.9 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.17 11.9 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.18 11.7 0.0 0.22 11.4 0.0 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_14 PF13173.6 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.2 11.7 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 NODE_54915_length_316_cov_44.854093_g46982_i0forward_frame_1 - 0.22 11.3 0.1 0.3 10.8 0.1 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein KdpC PF02669.15 NODE_54914_length_316_cov_50.633452_g46981_i0reverse_frame_1 - 0.056 13.3 0.2 0.085 12.7 0.2 1.3 1 0 0 1 1 1 0 K+-transporting ATPase, c chain TraG_N PF07916.11 NODE_54912_length_316_cov_54.451957_g46979_i0forward_frame_1 - 0.062 12.2 2.7 0.093 11.6 2.7 1.2 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF2992 PF11208.8 NODE_54909_length_316_cov_57.807829_g46976_i0reverse_frame_1 - 9.8 6.4 18.7 12 6.2 18.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2992) SRTM1 PF15872.5 NODE_54891_length_316_cov_98.569395_g46958_i0reverse_frame_1 - 3.4 7.9 5.3 4.7 7.4 5.3 1.4 1 1 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 Chromo_2 PF18704.1 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_1 - 0.046 14.0 0.3 0.046 14.0 0.3 1.7 2 0 0 2 2 2 0 Chromatin organization modifier domain 2 Glyco_tran_WbsX PF14307.6 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_1 - 0.07 12.6 3.0 0.08 12.4 3.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase WbsX DUF502 PF04367.13 NODE_54867_length_317_cov_1.234043_g46935_i0reverse_frame_1 - 0.021 14.7 0.0 0.026 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF502) Hormone_6 PF00236.18 NODE_54867_length_317_cov_1.234043_g46935_i0reverse_frame_1 - 0.044 13.8 0.5 0.054 13.5 0.5 1.4 1 0 0 1 1 1 0 Glycoprotein hormone Ntox46 PF15538.6 NODE_54865_length_317_cov_1.273050_g46933_i0reverse_frame_1 - 0.013 15.5 0.1 0.015 15.3 0.1 1.2 1 0 0 1 1 1 0 Bacterial toxin 46 DUF1712 PF08217.11 NODE_54861_length_317_cov_1.418440_g46929_i0forward_frame_1 - 0.0042 15.6 2.6 0.005 15.4 2.6 1.0 1 0 0 1 1 1 1 Fungal domain of unknown function (DUF1712) DUF2207 PF09972.9 NODE_54859_length_317_cov_1.475177_g46927_i0forward_frame_1 - 0.12 11.2 0.5 0.13 11.0 0.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phage_Nu1 PF07471.12 NODE_54859_length_317_cov_1.475177_g46927_i0forward_frame_1 - 0.12 12.2 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Phage DNA packaging protein Nu1 MASE5 PF17178.4 NODE_54852_length_317_cov_1.684397_g46920_i0reverse_frame_1 - 0.012 15.5 1.7 0.015 15.1 1.7 1.2 1 0 0 1 1 1 0 Membrane-associated sensor DUF2433 PF10360.9 NODE_54847_length_317_cov_1.794326_g46915_i0reverse_frame_1 - 0.0044 17.1 0.1 0.0053 16.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2433) UPF0561 PF10573.9 NODE_54845_length_317_cov_1.879433_g46913_i0reverse_frame_1 - 0.021 14.9 2.2 0.025 14.7 2.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 OTU PF02338.19 NODE_54844_length_317_cov_2.003546_g46912_i0reverse_frame_1 - 0.012 16.1 0.0 0.019 15.4 0.0 1.4 1 1 0 1 1 1 0 OTU-like cysteine protease DUF2634 PF10934.8 NODE_54836_length_317_cov_2.251773_g46904_i0reverse_frame_1 - 0.22 11.7 3.0 0.65 10.1 2.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2634) UPF0767 PF15990.5 NODE_54836_length_317_cov_2.251773_g46904_i0reverse_frame_1 - 2.4 8.4 5.6 1.4 9.1 1.1 2.0 1 1 1 2 2 2 0 UPF0767 family FG-GAP PF01839.23 NODE_54835_length_317_cov_2.258865_g46903_i0reverse_frame_1 - 0.16 12.1 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 FG-GAP repeat PSI PF01437.25 NODE_54835_length_317_cov_2.258865_g46903_i0forward_frame_1 - 0.78 10.3 7.9 0.35 11.5 5.3 1.8 2 0 0 2 2 2 0 Plexin repeat MobL PF18555.1 NODE_54827_length_317_cov_2.609929_g46895_i0forward_frame_1 - 0.00086 18.7 5.3 0.00095 18.5 5.3 1.0 1 0 0 1 1 1 1 MobL relaxases DUF3958 PF13125.6 NODE_54827_length_317_cov_2.609929_g46895_i0forward_frame_1 - 0.026 14.7 1.7 0.034 14.4 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3958) Calx-beta PF03160.14 NODE_54826_length_317_cov_2.716312_g46894_i0reverse_frame_1 - 6e-14 52.0 0.2 7.2e-14 51.8 0.2 1.1 1 0 0 1 1 1 1 Calx-beta domain Protamine_P1 PF00260.20 NODE_54821_length_317_cov_3.127660_g46889_i0reverse_frame_1 - 0.081 13.0 1.9 0.081 13.0 1.9 2.1 3 0 0 3 3 3 0 Protamine P1 TraB PF01963.17 NODE_54821_length_317_cov_3.127660_g46889_i0forward_frame_1 - 8e-15 55.4 0.0 9.1e-15 55.3 0.0 1.0 1 0 0 1 1 1 1 TraB family DUF2271 PF10029.9 NODE_54821_length_317_cov_3.127660_g46889_i0forward_frame_1 - 0.028 14.1 0.0 0.065 12.9 0.0 1.6 1 1 0 1 1 1 0 Predicted periplasmic protein (DUF2271) Hydrolase_4 PF12146.8 NODE_54821_length_317_cov_3.127660_g46889_i0forward_frame_1 - 0.14 11.4 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Serine aminopeptidase, S33 MORN PF02493.20 NODE_54820_length_317_cov_3.156028_g46888_i0forward_frame_1 - 4.5e-15 54.5 13.9 3.5e-06 26.6 1.4 4.0 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 NODE_54820_length_317_cov_3.156028_g46888_i0forward_frame_1 - 0.042 13.5 0.8 7.2 6.4 0.2 2.7 2 1 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain RED_N PF07808.13 NODE_54819_length_317_cov_3.429078_g46887_i0reverse_frame_1 - 0.017 14.7 0.1 0.021 14.4 0.1 1.0 1 0 0 1 1 1 0 RED-like protein N-terminal region RTX PF02382.15 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.02 14.6 0.4 0.022 14.4 0.4 1.1 1 0 0 1 1 1 0 N-terminal domain in RTX protein Cnn_1N PF07989.11 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.037 14.2 3.0 0.098 12.8 3.0 1.9 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF2087 PF09860.9 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.05 13.8 0.2 0.076 13.2 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) bZIP_2 PF07716.15 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.12 12.5 0.7 0.12 12.5 0.7 1.8 2 0 0 2 2 2 0 Basic region leucine zipper DUF4250 PF14056.6 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.35 10.9 3.8 2.3 8.2 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) YabA PF06156.13 NODE_54816_length_317_cov_3.524823_g46884_i0forward_frame_1 - 0.39 11.4 4.0 0.59 10.8 0.7 2.0 1 1 1 2 2 2 0 Initiation control protein YabA DAO PF01266.24 NODE_54811_length_317_cov_5.187943_g46880_i0forward_frame_1 - 7.2e-06 25.8 0.0 8.1e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Popeye PF04831.13 NODE_54809_length_317_cov_17.113475_g46878_i0reverse_frame_1 - 5.2 7.2 8.8 6.3 7.0 8.8 1.2 1 0 0 1 1 1 0 Popeye protein conserved region Chi-conotoxin PF16981.5 NODE_54808_length_317_cov_30.709220_g46877_i0forward_frame_1 - 0.05 13.8 0.8 0.1 12.8 0.8 1.5 1 0 0 1 1 1 0 chi-Conotoxin or t superfamily VGCC_beta4Aa_N PF12052.8 NODE_54805_length_317_cov_43.829787_g46874_i0reverse_frame_1 - 0.019 15.1 9.9 0.043 13.9 5.8 2.5 2 0 0 2 2 2 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal TATR PF03430.13 NODE_54804_length_317_cov_46.684397_g46873_i0forward_frame_1 - 0.29 9.5 1.3 0.29 9.5 1.3 1.1 1 0 0 1 1 1 0 Trans-activating transcriptional regulator CMS1 PF14617.6 NODE_54796_length_317_cov_70.758865_g46865_i0reverse_frame_1 - 0.02 14.2 0.1 0.024 14.0 0.1 1.1 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit FapA PF03961.13 NODE_54796_length_317_cov_70.758865_g46865_i0reverse_frame_1 - 0.2 10.2 4.0 0.22 10.1 4.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF485 PF04341.12 NODE_54796_length_317_cov_70.758865_g46865_i0forward_frame_1 - 0.089 12.7 0.2 0.089 12.7 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function, DUF485 FAM216B PF15107.6 NODE_54791_length_317_cov_83.297872_g46860_i0reverse_frame_1 - 0.031 14.1 0.5 0.051 13.4 0.5 1.4 1 0 0 1 1 1 0 FAM216B protein family FlhC PF05280.11 NODE_54791_length_317_cov_83.297872_g46860_i0forward_frame_1 - 0.036 13.8 0.1 0.061 13.0 0.1 1.4 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhC) SseC PF04888.12 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.011 15.4 5.6 0.011 15.4 5.6 1.8 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family Nup88 PF10168.9 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.018 12.9 12.1 0.021 12.7 12.1 1.0 1 0 0 1 1 1 0 Nuclear pore component Sec2p PF06428.11 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.018 15.0 16.5 0.023 14.6 5.1 2.1 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p DUF745 PF05335.13 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.02 14.6 6.9 0.023 14.4 6.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) HemX PF04375.14 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.043 13.1 8.7 0.052 12.8 8.7 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Csm1_N PF18504.1 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.047 14.0 4.8 0.047 14.0 4.8 2.2 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF3450 PF11932.8 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.054 12.8 11.7 0.036 13.4 4.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) BST2 PF16716.5 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.054 14.1 11.0 0.064 13.8 11.0 1.2 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 OmpH PF03938.14 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.078 13.3 14.9 0.097 13.0 14.9 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) PSRP-3_Ycf65 PF04839.13 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.083 13.1 1.5 0.083 13.1 1.5 2.1 2 1 0 2 2 2 0 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) CEP209_CC5 PF16574.5 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.097 12.8 14.2 0.15 12.2 14.2 1.3 1 1 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 DUF2780 PF11075.8 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.13 12.4 5.5 0.18 11.9 5.5 1.2 1 0 0 1 1 1 0 Protein of unknown function VcgC/VcgE (DUF2780) DUF4404 PF14357.6 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.14 12.8 7.6 0.3 11.7 0.2 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4404) DUF4515 PF14988.6 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.15 11.8 18.1 0.24 11.2 18.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4515) FlgM PF04316.13 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.2 12.0 5.2 6.2 7.3 0.1 2.2 2 0 0 2 2 2 0 Anti-sigma-28 factor, FlgM DUF1664 PF07889.12 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.21 11.6 10.3 2 8.4 6.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Fmp27_WPPW PF10359.9 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.23 10.3 11.3 0.25 10.1 11.3 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Noelin-1 PF12308.8 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.23 11.4 5.1 0.32 11.0 5.0 1.3 1 1 0 1 1 1 0 Neurogenesis glycoprotein Rotamase PF00639.21 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.25 12.3 5.6 0.43 11.6 5.6 1.5 1 1 0 1 1 1 0 PPIC-type PPIASE domain FTCD_C PF04961.12 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.39 10.5 5.2 0.46 10.2 5.2 1.1 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase TMPIT PF07851.13 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.6 9.3 11.9 0.74 9.0 11.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein Exonuc_VII_L PF02601.15 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.66 9.5 6.5 0.74 9.3 6.5 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit CENP-H PF05837.12 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.7 10.3 10.3 0.89 10.0 10.3 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF4795 PF16043.5 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.76 9.3 15.1 3.3 7.3 15.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Fib_alpha PF08702.10 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 0.81 9.9 12.1 2.2 8.5 12.1 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Atg14 PF10186.9 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 1.7 7.6 11.0 2 7.4 11.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF730 PF05325.11 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 2.7 8.0 9.8 0.23 11.5 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF730) USP8_interact PF08941.10 NODE_54789_length_317_cov_98.510638_g46858_i0reverse_frame_1 - 6.6 6.5 8.6 17 5.1 7.8 1.8 1 1 1 2 2 2 0 USP8 interacting Colicin_V PF02674.16 NODE_54784_length_317_cov_163.414894_g46853_i0forward_frame_1 - 0.073 13.0 0.4 0.12 12.4 0.4 1.4 1 1 0 1 1 1 0 Colicin V production protein DUF2207 PF09972.9 NODE_54768_length_317_cov_12721.968085_g46837_i0reverse_frame_1 - 1.8 7.2 8.4 2 7.1 8.4 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF334 PF03904.13 NODE_54768_length_317_cov_12721.968085_g46837_i0reverse_frame_1 - 9.7 5.7 8.1 12 5.4 8.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) PriCT_1 PF08708.11 NODE_54763_length_318_cov_1.321555_g46832_i0forward_frame_1 - 0.037 13.7 0.2 0.16 11.7 0.1 1.9 2 0 0 2 2 2 0 Primase C terminal 1 (PriCT-1) Arrestin_N PF00339.29 NODE_54762_length_318_cov_1.406360_g46831_i0forward_frame_1 - 0.00057 20.0 0.0 0.00074 19.6 0.0 1.2 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain TRP PF06011.12 NODE_54761_length_318_cov_1.445230_g46830_i0reverse_frame_1 - 7.1e-05 21.7 1.9 8.9e-05 21.4 1.9 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF5409 PF17421.2 NODE_54761_length_318_cov_1.445230_g46830_i0reverse_frame_1 - 0.73 10.6 5.2 0.52 11.1 3.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5409) Phageshock_PspD PF09584.10 NODE_54759_length_318_cov_1.614841_g46828_i0forward_frame_1 - 3.9e-22 78.0 2.6 5.5e-22 77.6 2.6 1.2 1 0 0 1 1 1 1 Phage shock protein PspD (Phageshock_PspD) Phosphorylase PF00343.20 NODE_54757_length_318_cov_1.777385_g46826_i0reverse_frame_1 - 5.7e-31 107.6 0.0 6.2e-31 107.4 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase ATP_sub_h PF10775.9 NODE_54746_length_318_cov_2.098940_g46815_i0reverse_frame_1 - 0.04 13.9 0.2 0.11 12.5 0.1 1.8 2 0 0 2 2 2 0 ATP synthase complex subunit h DUF2534 PF10749.9 NODE_54746_length_318_cov_2.098940_g46815_i0forward_frame_1 - 0.016 15.4 1.4 0.028 14.6 1.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2534) FGase PF05013.12 NODE_54745_length_318_cov_2.102473_g46814_i0reverse_frame_1 - 0.052 13.8 0.0 0.063 13.5 0.0 1.1 1 0 0 1 1 1 0 N-formylglutamate amidohydrolase CutC PF03932.14 NODE_54737_length_318_cov_2.604240_g46806_i0reverse_frame_1 - 0.21 11.0 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 CutC family HTH_AraC PF00165.23 NODE_54737_length_318_cov_2.604240_g46806_i0forward_frame_1 - 9.8e-10 38.3 0.0 1.4e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 NODE_54737_length_318_cov_2.604240_g46806_i0forward_frame_1 - 1.2e-05 25.5 0.1 2e-05 24.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain B277 PF17623.2 NODE_54736_length_318_cov_2.660777_g46805_i0reverse_frame_1 - 0.035 13.2 0.5 0.038 13.1 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function Med18 PF09637.10 NODE_54736_length_318_cov_2.660777_g46805_i0reverse_frame_1 - 0.099 12.5 0.1 0.1 12.4 0.1 1.1 1 0 0 1 1 1 0 Med18 protein DUF1189 PF06691.11 NODE_54735_length_318_cov_2.756184_g46804_i0forward_frame_1 - 5.7 6.4 15.1 25 4.3 14.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1189) DAP10 PF07213.11 NODE_54730_length_318_cov_3.098940_g46799_i0forward_frame_1 - 0.12 12.4 0.9 0.34 10.9 0.0 1.9 2 0 0 2 2 2 0 DAP10 membrane protein DUF2701 PF10857.8 NODE_54728_length_318_cov_3.162544_g46797_i0forward_frame_1 - 0.16 12.0 1.6 1.6 8.8 0.7 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2701) FA_synthesis PF02504.15 NODE_54724_length_318_cov_3.279152_g46793_i0forward_frame_1 - 5.6e-31 107.8 0.0 6e-31 107.7 0.0 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein Amb_V_allergen PF03913.13 NODE_54723_length_318_cov_3.692580_g46792_i0reverse_frame_1 - 0.083 12.9 4.9 1.7 8.6 0.0 2.3 2 0 0 2 2 2 0 Amb V Allergen zf-LITAF-like PF10601.9 NODE_54723_length_318_cov_3.692580_g46792_i0forward_frame_1 - 4.9 7.5 12.9 0.85 9.9 7.2 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain DUF2951 PF11166.8 NODE_54720_length_318_cov_4.409894_g46789_i0reverse_frame_1 - 1.5 9.1 6.9 1.6 9.0 6.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2951) ISK_Channel PF02060.15 NODE_54720_length_318_cov_4.409894_g46789_i0forward_frame_1 - 1.8 8.3 4.6 2.4 7.9 4.6 1.4 1 0 0 1 1 1 0 Slow voltage-gated potassium channel FYDLN_acid PF09538.10 NODE_54716_length_318_cov_25.946996_g46785_i0forward_frame_1 - 0.013 16.2 0.6 0.023 15.3 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) EGF_MSP1_1 PF12946.7 NODE_54712_length_318_cov_45.070671_g46781_i0reverse_frame_1 - 0.045 13.8 0.5 0.079 13.0 0.5 1.4 1 0 0 1 1 1 0 MSP1 EGF domain 1 Auxin_canalis PF05703.11 NODE_54708_length_318_cov_54.240283_g46777_i0forward_frame_1 - 0.67 9.8 4.6 0.73 9.7 4.6 1.0 1 0 0 1 1 1 0 Auxin canalisation Phage_HK97_TLTM PF06120.11 NODE_54707_length_318_cov_54.452297_g46776_i0reverse_frame_1 - 0.02 14.1 0.3 0.022 14.0 0.3 1.2 1 0 0 1 1 1 0 Tail length tape measure protein Arc_PepC_II PF06847.11 NODE_54707_length_318_cov_54.452297_g46776_i0reverse_frame_1 - 0.064 13.8 0.2 0.08 13.5 0.2 1.2 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II TSSC4 PF15264.6 NODE_54706_length_318_cov_55.954064_g46775_i0reverse_frame_1 - 0.038 14.2 0.2 0.044 14.0 0.2 1.2 1 0 0 1 1 1 0 Tumour suppressing sub-chromosomal transferable candidate 4 DUF2724 PF10893.8 NODE_54701_length_318_cov_62.706714_g46770_i0forward_frame_1 - 0.17 11.7 0.7 0.25 11.2 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2724) CLU_N PF15044.6 NODE_54695_length_318_cov_71.713781_g46764_i0reverse_frame_1 - 0.05 14.0 0.2 0.071 13.5 0.2 1.3 1 0 0 1 1 1 0 Mitochondrial function, CLU-N-term DUF4716 PF15837.5 NODE_54689_length_318_cov_81.289753_g46758_i0forward_frame_1 - 0.013 15.6 0.7 0.023 14.7 0.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4716) Reoviridae_Vp9 PF08978.10 NODE_54685_length_318_cov_106.985866_g46754_i0reverse_frame_1 - 0.15 11.2 1.1 0.18 11.0 1.1 1.1 1 0 0 1 1 1 0 Reoviridae VP9 CHCH PF06747.13 NODE_54684_length_318_cov_107.957597_g46753_i0reverse_frame_1 - 0.013 15.7 0.2 0.023 14.8 0.2 1.3 1 0 0 1 1 1 0 CHCH domain OrgA_MxiK PF09482.10 NODE_54679_length_318_cov_136.484099_g46748_i0reverse_frame_1 - 0.0019 18.1 0.1 0.0023 17.8 0.1 1.1 1 0 0 1 1 1 1 Bacterial type III secretion apparatus protein (OrgA_MxiK) Metallothi_Euk2 PF12809.7 NODE_54679_length_318_cov_136.484099_g46748_i0forward_frame_1 - 0.013 15.8 1.5 0.02 15.2 1.0 1.5 2 0 0 2 2 2 0 Eukaryotic metallothionein MIT_LIKE_ACTX PF17556.2 NODE_54677_length_318_cov_142.339223_g46746_i0forward_frame_1 - 0.49 11.0 4.9 3.6 8.3 0.5 2.2 2 0 0 2 2 2 0 MIT-like atracotoxin family IPT PF01745.16 NODE_54674_length_318_cov_198.681979_g46743_i0forward_frame_1 - 0.041 13.3 0.0 0.049 13.0 0.0 1.1 1 0 0 1 1 1 0 Isopentenyl transferase VSG_B PF13206.6 NODE_54669_length_318_cov_511.261484_g46738_i0reverse_frame_1 - 0.1 11.9 3.5 0.12 11.6 3.5 1.1 1 0 0 1 1 1 0 Trypanosomal VSG domain Ammonium_transp PF00909.21 NODE_54666_length_318_cov_5598.385159_g46735_i0reverse_frame_1 - 2.3e-07 29.8 0.0 3.4e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 Ammonium Transporter Family DHHC PF01529.20 NODE_54662_length_319_cov_1.288732_g46731_i0forward_frame_2 - 1.6e-22 80.1 7.8 1.6e-22 80.1 7.8 2.0 2 0 0 2 2 2 1 DHHC palmitoyltransferase DUF4033 PF13225.6 NODE_54655_length_319_cov_1.665493_g46724_i0reverse_frame_2 - 0.028 14.4 2.4 0.038 14.0 2.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) Gtr1_RagA PF04670.12 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 4e-19 68.9 0.1 4.1e-19 68.9 0.1 1.0 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 5.7e-06 26.0 0.1 6.7e-06 25.8 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 1.1e-05 25.0 0.0 1.2e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 0.0019 18.2 0.0 0.0032 17.5 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 0.019 15.2 0.0 0.021 15.0 0.0 1.1 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 NODE_54653_length_319_cov_1.757042_g46722_i0reverse_frame_3 - 0.036 14.1 0.0 0.045 13.8 0.0 1.2 1 0 0 1 1 1 0 Dynamin family HTH_49 PF18010.1 NODE_54648_length_319_cov_1.887324_g46717_i0reverse_frame_3 - 0.13 12.1 0.1 0.27 11.2 0.1 1.5 1 0 0 1 1 1 0 Cry35Ab1 HTH C-terminal domain Toxin_30 PF08117.11 NODE_54647_length_319_cov_1.904930_g46716_i0reverse_frame_3 - 0.78 10.0 4.7 12 6.3 1.3 2.2 2 0 0 2 2 2 0 Ptu family DUF2129 PF09902.9 NODE_54647_length_319_cov_1.904930_g46716_i0forward_frame_2 - 0.014 15.4 0.5 4.4 7.4 0.1 2.4 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2129) NRIP1_repr_1 PF15687.5 NODE_54646_length_319_cov_1.933099_g46715_i0reverse_frame_2 - 0.1 12.2 2.4 0.13 11.9 2.4 1.1 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 1 DUF3255 PF11631.8 NODE_54645_length_319_cov_1.992958_g46714_i0reverse_frame_2 - 0.16 11.8 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3255) Lep_receptor_Ig PF06328.11 NODE_54644_length_319_cov_2.038732_g46713_i0reverse_frame_3 - 0.024 14.6 0.2 0.042 13.8 0.2 1.3 1 0 0 1 1 1 0 Ig-like C2-type domain Como_LCP PF02247.16 NODE_54644_length_319_cov_2.038732_g46713_i0forward_frame_3 - 0.037 12.7 0.0 0.039 12.6 0.0 1.0 1 0 0 1 1 1 0 Large coat protein Pkinase PF00069.25 NODE_54642_length_319_cov_2.158451_g46711_i0forward_frame_2 - 2.2e-17 63.3 1.5 2.7e-17 63.0 1.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_54642_length_319_cov_2.158451_g46711_i0forward_frame_2 - 3e-12 46.4 0.4 3.4e-12 46.2 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase NCD1 PF04904.13 NODE_54642_length_319_cov_2.158451_g46711_i0forward_frame_2 - 0.014 15.4 0.2 0.032 14.2 0.2 1.7 1 1 0 1 1 1 0 NAB conserved region 1 (NCD1) T3RM_EcoP15I_C PF18273.1 NODE_54642_length_319_cov_2.158451_g46711_i0forward_frame_2 - 0.03 14.6 1.2 0.2 12.0 0.2 2.0 1 1 1 2 2 2 0 Type III R-M EcoP15I C-terminal domain zf-HC2 PF13490.6 NODE_54640_length_319_cov_2.186620_g46709_i0forward_frame_2 - 0.19 12.0 1.8 0.42 10.9 0.2 2.3 2 0 0 2 2 2 0 Putative zinc-finger OppC_N PF12911.7 NODE_54639_length_319_cov_2.235915_g46708_i0forward_frame_2 - 8.9e-16 57.6 0.7 8.9e-16 57.6 0.7 1.8 2 0 0 2 2 2 1 N-terminal TM domain of oligopeptide transport permease C DUF2116 PF09889.9 NODE_54639_length_319_cov_2.235915_g46708_i0forward_frame_2 - 0.25 11.3 1.3 0.31 11.0 0.2 1.6 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) MISS PF15822.5 NODE_54638_length_319_cov_2.288732_g46707_i0reverse_frame_2 - 0.017 15.0 1.0 0.019 14.8 1.0 1.1 1 0 0 1 1 1 0 MAPK-interacting and spindle-stabilising protein-like DUF3624 PF12292.8 NODE_54637_length_319_cov_2.306338_g46706_i0reverse_frame_3 - 0.081 13.3 0.7 0.081 13.3 0.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3624) TcdB_N PF12918.7 NODE_54636_length_319_cov_2.334507_g46705_i0reverse_frame_2 - 0.085 13.2 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 TcdB toxin N-terminal helical domain MA3 PF02847.17 NODE_54632_length_319_cov_2.545775_g46701_i0forward_frame_3 - 0.0014 18.6 0.1 0.0037 17.2 0.0 1.7 2 0 0 2 2 2 1 MA3 domain DUF1600 PF07667.11 NODE_54632_length_319_cov_2.545775_g46701_i0forward_frame_3 - 0.038 14.2 0.1 0.045 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) AvrL567-A PF11529.8 NODE_54632_length_319_cov_2.545775_g46701_i0forward_frame_3 - 0.042 14.0 0.2 0.075 13.2 0.2 1.4 1 0 0 1 1 1 0 Melampsora lini avirulence protein AvrL567-A Sid-5 PF17204.3 NODE_54630_length_319_cov_2.577465_g46699_i0reverse_frame_3 - 1.1 9.5 7.7 0.53 10.5 1.3 2.2 2 0 0 2 2 2 0 Sid-5 family SHIPPO-rpt PF07004.12 NODE_54630_length_319_cov_2.577465_g46699_i0reverse_frame_2 - 0.0013 19.5 0.2 0.028 15.4 0.0 2.5 2 0 0 2 2 2 1 Sperm-tail PG-rich repeat Glyco_hydro_4 PF02056.16 NODE_54624_length_319_cov_2.845070_g46693_i0reverse_frame_3 - 1.3e-07 31.4 0.0 1.8e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase zf-RING_4 PF14570.6 NODE_54617_length_319_cov_3.292254_g46686_i0forward_frame_3 - 0.04 13.7 3.5 0.066 13.0 3.5 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Arm_3 PF16186.5 NODE_54604_length_319_cov_43.429577_g46673_i0reverse_frame_3 - 0.16 11.5 0.8 2 8.1 0.8 2.5 1 1 0 1 1 1 0 Atypical Arm repeat WHIM1 PF15612.6 NODE_54604_length_319_cov_43.429577_g46673_i0forward_frame_2 - 0.023 14.2 0.3 0.049 13.2 0.3 1.6 1 0 0 1 1 1 0 WSTF, HB1, Itc1p, MBD9 motif 1 KIAA1328 PF15369.6 NODE_54603_length_319_cov_44.894366_g46672_i0forward_frame_3 - 0.013 15.4 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein KIAA1328 DUF3930 PF13067.6 NODE_54600_length_319_cov_56.781690_g46669_i0reverse_frame_2 - 0.006 16.8 0.5 0.013 15.7 0.5 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3930) Glyco_transf_4 PF13439.6 NODE_54600_length_319_cov_56.781690_g46669_i0reverse_frame_2 - 0.13 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase Family 4 PPR_3 PF13812.6 NODE_54599_length_319_cov_56.813380_g46668_i0reverse_frame_3 - 0.00097 19.2 0.0 0.0016 18.4 0.0 1.3 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_54599_length_319_cov_56.813380_g46668_i0reverse_frame_3 - 0.0014 18.8 0.0 0.0023 18.1 0.0 1.4 1 0 0 1 1 1 1 PPR repeat family PPR_1 PF12854.7 NODE_54599_length_319_cov_56.813380_g46668_i0reverse_frame_3 - 0.017 14.8 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 PPR repeat PPR_long PF17177.4 NODE_54599_length_319_cov_56.813380_g46668_i0reverse_frame_3 - 0.063 12.6 0.0 0.072 12.5 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Csm2_III-A PF03750.13 NODE_54597_length_319_cov_61.461268_g46666_i0reverse_frame_3 - 0.018 15.9 0.4 0.02 15.7 0.4 1.1 1 0 0 1 1 1 0 Csm2 Type III-A DUF5624 PF18538.1 NODE_54597_length_319_cov_61.461268_g46666_i0reverse_frame_3 - 0.089 12.9 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5624) Imm61 PF15598.6 NODE_54597_length_319_cov_61.461268_g46666_i0reverse_frame_3 - 0.12 12.3 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 61 GP3_package PF16677.5 NODE_54597_length_319_cov_61.461268_g46666_i0reverse_frame_2 - 0.051 13.7 0.2 0.074 13.2 0.2 1.4 1 0 0 1 1 1 0 DNA-packaging protein gp3 DUF2750 PF11042.8 NODE_54596_length_319_cov_61.947183_g46665_i0forward_frame_2 - 0.06 13.4 0.0 0.081 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2750) BAR_2 PF10455.9 NODE_54591_length_319_cov_66.904930_g46660_i0reverse_frame_3 - 0.028 13.6 0.6 0.031 13.4 0.6 1.1 1 0 0 1 1 1 0 Bin/amphiphysin/Rvs domain for vesicular trafficking SgrT PF15894.5 NODE_54589_length_319_cov_70.116197_g46658_i0forward_frame_2 - 0.075 13.0 0.6 0.13 12.2 0.6 1.4 1 0 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT Kelch_1 PF01344.25 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 3.7e-05 23.2 0.9 0.0037 16.8 0.0 2.8 3 0 0 3 3 3 1 Kelch motif Kelch_3 PF13415.6 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 0.0026 18.0 3.7 0.15 12.4 0.0 2.9 2 1 0 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 0.018 15.0 0.0 3.4 7.8 0.0 2.3 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 0.02 14.9 0.1 0.22 11.6 0.0 2.3 2 0 0 2 2 2 0 Kelch motif Kelch_6 PF13964.6 NODE_54588_length_319_cov_70.612676_g46657_i0forward_frame_2 - 0.054 13.8 0.3 1.3 9.4 0.2 2.3 2 1 0 2 2 2 0 Kelch motif Fam20C PF06702.12 NODE_54585_length_319_cov_74.214789_g46654_i0forward_frame_2 - 0.01 15.7 0.0 0.013 15.4 0.0 1.1 1 0 0 1 1 1 0 Golgi casein kinase, C-terminal, Fam20 NOB1_Zn_bind PF08772.11 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.016 15.3 3.9 0.027 14.6 3.9 1.4 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like RT_RNaseH PF17917.1 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.023 14.9 0.1 0.03 14.6 0.1 1.3 1 0 0 1 1 1 0 RNase H-like domain found in reverse transcriptase GBS_Bsp-like PF08481.10 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.027 14.6 0.3 0.057 13.5 0.4 1.5 2 0 0 2 2 2 0 GBS Bsp-like repeat Ribosomal_L34e PF01199.18 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.033 14.5 0.7 0.062 13.6 0.7 1.6 1 1 0 1 1 1 0 Ribosomal protein L34e HypA PF01155.19 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.047 13.7 1.3 0.064 13.3 1.3 1.5 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3291 PF11695.8 NODE_54584_length_319_cov_77.109155_g46653_i0forward_frame_2 - 0.094 12.4 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3291) Nudc_N PF14050.6 NODE_54583_length_319_cov_80.609155_g46652_i0reverse_frame_2 - 0.06 13.3 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. PriA_CRR PF18319.1 NODE_54582_length_319_cov_82.193662_g46651_i0reverse_frame_3 - 1.4 8.9 10.3 0.24 11.4 2.9 2.9 3 0 0 3 3 3 0 PriA DNA helicase Cys-rich region (CRR) domain Harakiri PF15196.6 NODE_54582_length_319_cov_82.193662_g46651_i0reverse_frame_2 - 0.05 14.1 7.0 0.056 13.9 5.3 2.0 1 1 0 1 1 1 0 Activator of apoptosis harakiri Toxin_2 PF00451.19 NODE_54581_length_319_cov_83.253521_g46650_i0forward_frame_3 - 0.14 12.5 1.9 0.25 11.7 1.9 1.4 1 0 0 1 1 1 0 Scorpion short toxin, BmKK2 PAGK PF15284.6 NODE_54581_length_319_cov_83.253521_g46650_i0forward_frame_3 - 1.2 9.1 4.2 0.52 10.3 1.6 1.7 2 0 0 2 2 2 0 Phage-encoded virulence factor ATP_synth_reg PF14960.6 NODE_54578_length_319_cov_92.186620_g46647_i0reverse_frame_2 - 1.3 8.6 4.3 1.1 8.8 2.3 1.9 1 1 1 2 2 2 0 ATP synthase regulation Tantalus PF15386.6 NODE_54578_length_319_cov_92.186620_g46647_i0forward_frame_3 - 0.35 11.0 6.2 0.54 10.4 6.2 1.2 1 0 0 1 1 1 0 Drosophila Tantalus-like CSD PF00313.22 NODE_54576_length_319_cov_97.904930_g46645_i0reverse_frame_3 - 0.035 14.0 0.0 0.052 13.4 0.0 1.3 1 0 0 1 1 1 0 'Cold-shock' DNA-binding domain SAG PF04092.13 NODE_54572_length_319_cov_133.742958_g46641_i0forward_frame_2 - 0.029 15.2 0.4 0.031 15.1 0.4 1.1 1 0 0 1 1 1 0 SRS domain RNA_pol_N PF01194.17 NODE_54571_length_319_cov_135.975352_g46640_i0reverse_frame_3 - 1.9e-13 50.5 0.0 3e-13 49.8 0.0 1.5 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit UPF0020 PF01170.18 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 1.3e-13 51.1 0.0 5.1e-12 45.9 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 1.5e-10 41.6 0.0 2e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 1.1e-09 38.7 0.0 1.5e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 1.7e-07 31.1 0.0 1.9e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.00028 20.3 0.0 0.00033 20.0 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Cons_hypoth95 PF03602.15 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.00041 20.1 0.0 0.00048 19.8 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein 95 N6_N4_Mtase PF01555.18 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.00058 19.6 0.0 0.00076 19.3 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Met_10 PF02475.16 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.00075 19.3 0.0 0.00087 19.1 0.0 1.0 1 0 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.013 14.9 0.0 0.015 14.7 0.0 1.0 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) GCD14 PF08704.10 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.014 15.1 0.0 0.015 14.9 0.0 1.0 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit MTS PF05175.14 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.014 15.0 0.0 0.016 14.8 0.0 1.0 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_24 PF13578.6 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.024 15.7 0.0 0.027 15.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PG_isomerase_N PF18353.1 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.064 13.7 0.1 0.075 13.4 0.1 1.2 1 0 0 1 1 1 0 Phosphoglucose isomerase N-terminal domain Methyltransf_8 PF05148.15 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.088 12.6 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_15 PF09445.10 NODE_54570_length_319_cov_145.954225_g46639_i0forward_frame_3 - 0.13 11.8 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase DUF1816 PF08846.10 NODE_54568_length_319_cov_161.200704_g46637_i0reverse_frame_3 - 0.0058 16.6 0.0 0.0094 15.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1816) TRAPP PF04051.16 NODE_54566_length_319_cov_179.323944_g46635_i0forward_frame_2 - 0.16 11.7 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Transport protein particle (TRAPP) component Baculo_8kDa PF06096.11 NODE_54565_length_319_cov_180.623239_g46634_i0forward_frame_3 - 0.15 12.2 0.1 0.23 11.6 0.1 1.4 1 1 0 1 1 1 0 Baculoviridae 8.2 KDa protein WSK PF03832.13 NODE_54563_length_319_cov_204.926056_g46632_i0reverse_frame_2 - 0.67 9.7 6.4 1.3 8.8 6.4 1.4 1 0 0 1 1 1 0 WSK motif Ycf1 PF05758.12 NODE_54563_length_319_cov_204.926056_g46632_i0forward_frame_3 - 0.0047 14.9 0.2 0.0057 14.6 0.2 1.0 1 0 0 1 1 1 1 Ycf1 DUF3474 PF11960.8 NODE_54561_length_319_cov_227.580986_g46630_i0forward_frame_2 - 0.74 10.0 3.8 2 8.6 0.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3474) DUF4335 PF14233.6 NODE_54557_length_319_cov_390.838028_g46626_i0forward_frame_2 - 0.044 13.7 0.0 0.055 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4335) KH_4 PF13083.6 NODE_54554_length_319_cov_592.267606_g46623_i0reverse_frame_2 - 0.047 13.6 1.3 8.2 6.4 0.1 2.2 2 0 0 2 2 2 0 KH domain Matrilin_ccoil PF10393.9 NODE_54554_length_319_cov_592.267606_g46623_i0reverse_frame_2 - 0.24 11.3 1.0 13 5.8 0.1 2.2 1 1 1 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin IspA PF04279.15 NODE_54549_length_320_cov_1.400000_g46618_i0forward_frame_3 - 7.8e-09 36.0 5.5 1e-08 35.5 5.5 1.2 1 0 0 1 1 1 1 Intracellular septation protein A GerPB PF10803.8 NODE_54540_length_320_cov_1.789474_g46609_i0reverse_frame_2 - 0.15 12.2 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 Spore germination GerPB Swm2 PF17083.5 NODE_54539_length_320_cov_1.810526_g46608_i0reverse_frame_2 - 0.0074 16.3 0.1 0.012 15.6 0.1 1.4 1 1 0 1 1 1 1 Nucleolar protein Swm2 Pox_A51 PF04948.13 NODE_54538_length_320_cov_1.817544_g46607_i0forward_frame_2 - 0.01 14.7 0.1 0.011 14.6 0.1 1.0 1 0 0 1 1 1 0 Poxvirus A51 protein Retrotran_gag_2 PF14223.6 NODE_54537_length_320_cov_1.824561_g46606_i0reverse_frame_2 - 1.3e-10 41.1 0.0 1.5e-10 40.9 0.0 1.0 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type SCAN PF02023.17 NODE_54537_length_320_cov_1.824561_g46606_i0reverse_frame_2 - 0.074 12.9 0.1 0.13 12.1 0.1 1.5 1 1 0 1 1 1 0 SCAN domain Ribosomal_S7 PF00177.21 NODE_54537_length_320_cov_1.824561_g46606_i0reverse_frame_2 - 0.11 12.1 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S7p/S5e CobN-Mg_chel PF02514.16 NODE_54537_length_320_cov_1.824561_g46606_i0reverse_frame_2 - 0.14 9.8 0.0 0.15 9.8 0.0 1.1 1 0 0 1 1 1 0 CobN/Magnesium Chelatase T2SSppdC PF12528.8 NODE_54530_length_320_cov_2.108772_g46599_i0reverse_frame_2 - 0.091 13.5 1.0 0.18 12.6 0.1 1.8 2 0 0 2 2 2 0 Type II secretion prepilin peptidase dependent protein C DUF4064 PF13273.6 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.00095 19.4 3.4 0.0011 19.2 3.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF4064) DUF5383 PF17355.2 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.034 14.5 1.8 0.04 14.3 1.8 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5383) DUF2207 PF09972.9 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.042 12.6 0.2 0.046 12.5 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5393 PF17371.2 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.059 11.5 0.9 0.059 11.5 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5393) DUF1218 PF06749.12 NODE_54529_length_320_cov_2.182456_g46598_i0forward_frame_3 - 0.089 13.3 0.1 0.13 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) Acetyltransf_11 PF13720.6 NODE_54527_length_320_cov_2.287719_g46596_i0reverse_frame_3 - 0.02 15.3 0.1 0.032 14.7 0.1 1.4 1 1 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ERp29 PF07749.12 NODE_54527_length_320_cov_2.287719_g46596_i0reverse_frame_3 - 0.087 13.7 1.1 0.18 12.7 1.2 1.5 1 1 1 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks250.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks250.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks250.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks250.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:11:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2417 PF10329.9 NODE_54527_length_320_cov_2.287719_g46596_i0forward_frame_2 - 0.1 12.0 4.2 0.12 11.7 4.2 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) HCV_core PF01542.18 NODE_54524_length_320_cov_2.477193_g46593_i0forward_frame_3 - 1.7 9.1 4.0 19 5.7 1.7 2.5 1 1 1 2 2 2 0 Hepatitis C virus core protein SWIRM-assoc_1 PF16495.5 NODE_54520_length_320_cov_2.607018_g46589_i0forward_frame_2 - 0.14 12.2 0.3 0.22 11.5 0.3 1.2 1 0 0 1 1 1 0 SWIRM-associated region 1 Yeast_MT PF11403.8 NODE_54519_length_320_cov_2.771930_g46588_i0reverse_frame_3 - 0.053 14.1 1.3 0.11 13.1 1.3 1.5 1 0 0 1 1 1 0 Yeast metallothionein LA-virus_coat PF09220.10 NODE_54519_length_320_cov_2.771930_g46588_i0reverse_frame_3 - 0.061 11.9 0.0 0.068 11.8 0.0 1.0 1 0 0 1 1 1 0 L-A virus, major coat protein Sigma70_r1_2 PF00140.20 NODE_54519_length_320_cov_2.771930_g46588_i0forward_frame_2 - 0.25 11.4 0.0 0.4 10.7 0.0 1.3 1 0 0 1 1 1 0 Sigma-70 factor, region 1.2 MFS_1_like PF12832.7 NODE_54518_length_320_cov_2.775439_g46587_i0reverse_frame_2 - 0.0093 14.9 6.5 0.012 14.5 6.5 1.0 1 0 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 NODE_54518_length_320_cov_2.775439_g46587_i0reverse_frame_2 - 0.096 11.6 19.8 0.11 11.4 19.8 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily IF-2B PF01008.17 NODE_54518_length_320_cov_2.775439_g46587_i0reverse_frame_2 - 0.1 11.8 0.2 0.12 11.6 0.2 1.1 1 0 0 1 1 1 0 Initiation factor 2 subunit family DUF1270 PF06900.11 NODE_54518_length_320_cov_2.775439_g46587_i0reverse_frame_2 - 2.4 8.6 7.3 12 6.3 1.5 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1270) STT3 PF02516.14 NODE_54516_length_320_cov_2.978947_g46585_i0reverse_frame_2 - 0.085 11.8 0.1 0.09 11.7 0.1 1.0 1 0 0 1 1 1 0 Oligosaccharyl transferase STT3 subunit PapD_N PF00345.20 NODE_54515_length_320_cov_3.073684_g46584_i0forward_frame_2 - 9e-29 99.9 0.0 1.1e-28 99.7 0.0 1.0 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain Peptidase_M50B PF13398.6 NODE_54514_length_320_cov_3.182456_g46583_i0forward_frame_2 - 0.071 12.7 0.1 0.089 12.4 0.1 1.1 1 0 0 1 1 1 0 Peptidase M50B-like DUF2075 PF09848.9 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.0056 16.0 0.0 0.0065 15.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) POTRA_2 PF08479.11 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.014 15.3 0.0 0.028 14.3 0.0 1.5 1 0 0 1 1 1 0 POTRA domain, ShlB-type DEAD_2 PF06733.15 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.02 14.5 0.0 0.036 13.7 0.0 1.4 2 0 0 2 2 2 0 DEAD_2 DUF4507 PF14964.6 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.079 11.9 0.3 0.093 11.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4507) 2_5_RNA_ligase2 PF13563.6 NODE_54509_length_320_cov_3.919298_g46578_i0forward_frame_2 - 0.12 12.2 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 2'-5' RNA ligase superfamily DUF3333 PF11812.8 NODE_54499_length_320_cov_46.070175_g46568_i0forward_frame_3 - 0.0088 16.3 0.4 0.013 15.7 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3333) TLD PF07534.16 NODE_54497_length_320_cov_51.698246_g46566_i0reverse_frame_3 - 0.032 14.4 0.0 0.043 14.0 0.0 1.2 1 0 0 1 1 1 0 TLD zf-WRNIP1_ubi PF18279.1 NODE_54496_length_320_cov_51.978947_g46565_i0reverse_frame_3 - 0.11 13.2 1.7 0.16 12.7 0.2 2.2 2 0 0 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain COLFI PF01410.18 NODE_54495_length_320_cov_52.564912_g46564_i0forward_frame_2 - 0.018 14.3 0.2 0.021 14.1 0.2 1.1 1 0 0 1 1 1 0 Fibrillar collagen C-terminal domain Peptidase_C1 PF00112.23 NODE_54493_length_320_cov_56.571930_g46562_i0forward_frame_3 - 4.8e-12 46.4 3.1 6.9e-12 45.9 3.1 1.4 1 1 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_54493_length_320_cov_56.571930_g46562_i0forward_frame_3 - 0.084 11.6 0.3 0.098 11.4 0.3 1.1 1 0 0 1 1 1 0 Peptidase C1-like family DUF4131 PF13567.6 NODE_54492_length_320_cov_58.428070_g46561_i0reverse_frame_2 - 0.15 11.7 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) BRCC36_C PF18110.1 NODE_54492_length_320_cov_58.428070_g46561_i0forward_frame_3 - 0.0058 16.8 0.0 0.0087 16.2 0.0 1.2 1 0 0 1 1 1 1 BRCC36 C-terminal helical domain RFX5_DNA_bdg PF14621.6 NODE_54491_length_320_cov_58.989474_g46560_i0forward_frame_2 - 0.14 11.9 0.0 0.16 11.7 0.0 1.0 1 0 0 1 1 1 0 RFX5 DNA-binding domain LMF1 PF06762.14 NODE_54487_length_320_cov_68.242105_g46556_i0forward_frame_3 - 0.49 9.5 4.4 0.5 9.4 4.4 1.1 1 0 0 1 1 1 0 Lipase maturation factor Squash PF00299.18 NODE_54484_length_320_cov_70.536842_g46553_i0reverse_frame_3 - 0.056 13.5 3.4 0.17 11.9 3.4 1.9 1 0 0 1 1 1 0 Squash family serine protease inhibitor DUF5524 PF17662.1 NODE_54480_length_320_cov_73.740351_g46549_i0reverse_frame_2 - 0.059 12.7 0.0 0.068 12.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5524) ATP-synt_B PF00430.18 NODE_54479_length_320_cov_75.442105_g46548_i0reverse_frame_2 - 0.054 13.6 0.8 0.054 13.6 0.8 1.5 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) Frag1 PF10277.9 NODE_54479_length_320_cov_75.442105_g46548_i0forward_frame_3 - 0.065 12.8 3.1 0.074 12.6 3.1 1.1 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family RRM_1 PF00076.22 NODE_54477_length_320_cov_81.371930_g46546_i0forward_frame_2 - 3.8e-20 71.5 0.0 4.9e-20 71.1 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Rootletin PF15035.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.00016 21.8 7.0 0.00016 21.8 7.0 1.3 1 1 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion ATG16 PF08614.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.00027 21.2 8.7 0.00032 21.0 8.7 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF16 PF01519.16 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0012 19.4 4.8 0.0013 19.1 4.8 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF16 HIP1_clath_bdg PF16515.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0012 19.5 9.6 0.0015 19.1 9.6 1.1 1 0 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 DivIC PF04977.15 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0021 17.8 12.3 0.099 12.4 5.4 2.4 1 1 1 2 2 2 2 Septum formation initiator FAM76 PF16046.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0021 17.5 12.6 0.0095 15.3 12.5 1.8 1 1 0 1 1 1 1 FAM76 protein CENP-F_leu_zip PF10473.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0041 17.2 9.5 0.0049 16.9 9.5 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.0072 15.2 9.7 0.0084 15.0 9.7 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Mod_r PF07200.13 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.018 15.2 6.1 0.023 14.8 6.1 1.2 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein AAA_13 PF13166.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.019 13.6 5.4 0.022 13.5 5.4 1.1 1 0 0 1 1 1 0 AAA domain HMMR_N PF15905.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.02 14.4 10.5 0.023 14.2 10.5 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal CEP63 PF17045.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.02 14.8 10.8 0.36 10.7 2.1 2.0 1 1 1 2 2 2 0 Centrosomal protein of 63 kDa ADIP PF11559.8 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.024 14.7 9.7 0.034 14.2 9.6 1.4 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding CC2-LZ PF16516.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.027 14.8 12.1 0.029 14.7 6.6 2.1 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator zf-C4H2 PF10146.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.039 14.3 9.6 0.045 14.0 9.6 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein bZIP_1 PF00170.21 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.041 14.0 13.7 0.12 12.5 2.2 3.1 1 1 2 3 3 3 0 bZIP transcription factor CALCOCO1 PF07888.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.052 12.4 9.9 0.063 12.2 9.9 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Golgin_A5 PF09787.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.055 12.9 10.5 0.06 12.8 10.5 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 OmpH PF03938.14 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.066 13.6 11.3 0.12 12.7 11.4 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4200 PF13863.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.071 13.5 15.0 0.12 12.7 14.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) BRE1 PF08647.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.076 13.1 12.8 0.099 12.7 12.8 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase DUF3552 PF12072.8 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.078 12.4 13.4 0.11 11.9 13.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) Fez1 PF06818.15 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.079 13.4 9.9 0.088 13.2 9.0 1.4 1 1 0 1 1 1 0 Fez1 Fib_alpha PF08702.10 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.1 12.8 7.7 0.14 12.4 7.7 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Lebercilin PF15619.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.13 11.9 12.5 0.22 11.1 12.5 1.4 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease CENP-H PF05837.12 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.13 12.7 7.2 0.16 12.4 7.2 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) HAUS5 PF14817.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.15 10.8 6.4 0.2 10.4 6.4 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 5 Dzip-like_N PF13815.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.16 12.0 6.7 0.091 12.7 2.8 2.0 1 1 1 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal DUF4407 PF14362.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.17 11.2 3.1 0.26 10.6 3.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF724 PF05266.14 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.2 11.5 10.1 0.23 11.3 10.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) FIN1 PF17300.2 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.2 11.1 8.9 0.24 10.9 8.9 1.1 1 0 0 1 1 1 0 Filaments in between nuclei protein-1 DUF4446 PF14584.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.21 11.6 7.9 0.11 12.5 4.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF3450 PF11932.8 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.22 10.8 8.0 0.091 12.1 4.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) TMPIT PF07851.13 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.24 10.6 7.0 0.25 10.5 7.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein Atg14 PF10186.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.26 10.3 9.5 0.28 10.2 9.5 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_CLD_2 PF14197.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.31 11.2 9.8 3.4 7.8 0.3 3.0 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 Lectin_N PF03954.14 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.32 10.7 2.4 0.42 10.4 2.3 1.3 1 1 0 1 1 1 0 Hepatic lectin, N-terminal domain UPF0242 PF06785.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.32 11.1 11.9 0.78 9.8 11.9 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2203 PF09969.9 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.46 11.2 5.9 1.1 9.9 5.9 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) Tho2 PF11262.8 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.56 9.4 8.2 0.66 9.1 8.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 FlxA PF14282.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.56 10.2 12.3 0.62 10.1 7.5 2.0 1 1 1 2 2 2 0 FlxA-like protein BST2 PF16716.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.63 10.7 8.2 1.7 9.3 8.1 1.7 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 APG6_N PF17675.1 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.7 10.4 11.7 1.1 9.8 11.7 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region MRPL52 PF18699.1 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.78 10.0 9.2 0.32 11.2 6.6 1.7 1 1 1 2 2 2 0 Mitoribosomal protein mL52 V_ATPase_I PF01496.19 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.89 7.4 7.2 0.93 7.3 7.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4094 PF13334.6 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 0.93 10.0 6.8 0.5 10.8 3.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) Fungal_TACC PF12709.7 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1 9.8 11.5 0.87 10.1 3.5 2.8 1 1 2 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins YabA PF06156.13 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1 10.0 8.1 0.6 10.8 5.8 1.6 1 1 1 2 2 2 0 Initiation control protein YabA DUF1664 PF07889.12 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1.1 9.4 7.0 2.6 8.1 7.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) SlyX PF04102.12 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1.4 9.6 5.6 3.3 8.4 2.1 2.2 1 1 1 2 2 2 0 SlyX Ly49 PF08391.10 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 1.9 8.9 7.6 3 8.2 7.6 1.3 1 1 0 1 1 1 0 Ly49-like protein, N-terminal region PKcGMP_CC PF16808.5 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 2.9 7.8 18.8 0.24 11.3 1.8 4.1 2 1 2 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase GrpE PF01025.19 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 3 7.5 12.3 53 3.4 12.3 2.0 1 1 0 1 1 1 0 GrpE LMBR1 PF04791.16 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 4 6.2 4.9 4.5 6.1 4.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein LapA_dom PF06305.11 NODE_54471_length_320_cov_98.592982_g46540_i0forward_frame_2 - 5.2 7.0 5.2 14 5.6 1.3 2.9 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain AAA_lid_4 PF17864.1 NODE_54470_length_320_cov_113.957895_g46539_i0forward_frame_3 - 1.4 8.7 3.4 3.9 7.3 3.4 1.6 2 0 0 2 2 2 0 RuvB AAA lid domain Tryp_alpha_amyl PF00234.22 NODE_54465_length_320_cov_137.364912_g46534_i0reverse_frame_3 - 0.83 10.1 9.0 3.3 8.2 9.0 1.9 1 1 0 1 1 1 0 Protease inhibitor/seed storage/LTP family Innexin PF00876.18 NODE_54465_length_320_cov_137.364912_g46534_i0forward_frame_3 - 0.36 10.1 3.9 0.075 12.3 0.8 1.5 2 0 0 2 2 2 0 Innexin DiSB-ORF2_chro PF16506.5 NODE_54459_length_320_cov_214.266667_g46528_i0reverse_frame_2 - 0.067 13.2 2.0 0.092 12.8 0.3 2.0 1 1 1 2 2 2 0 Putative virion glycoprotein of insect viruses Alpha_GJ PF03229.13 NODE_54459_length_320_cov_214.266667_g46528_i0reverse_frame_2 - 0.081 13.5 3.3 0.12 12.9 3.3 1.3 1 1 0 1 1 1 0 Alphavirus glycoprotein J DUF364 PF04016.12 NODE_54457_length_320_cov_317.554386_g46526_i0forward_frame_2 - 0.19 11.3 0.2 0.53 9.8 0.1 1.7 1 1 1 2 2 2 0 Putative heavy-metal chelation PSI_integrin PF17205.3 NODE_54454_length_320_cov_382.371930_g46523_i0forward_frame_3 - 0.23 11.2 8.4 1.5 8.6 7.1 2.2 1 1 1 2 2 2 0 Integrin plexin domain DUF3948 PF13134.6 NODE_54442_length_321_cov_1.737762_g46511_i0reverse_frame_3 - 0.27 10.9 0.0 0.42 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3948) EF-hand_7 PF13499.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 3.8e-09 36.9 1.4 5.6e-09 36.3 1.4 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 4.3e-09 36.1 0.7 6.8e-09 35.4 0.7 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 1.9e-07 30.4 1.2 0.00015 21.4 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 1.7e-06 27.2 3.2 3.6e-05 23.0 0.3 2.7 2 1 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 0.00017 20.9 2.9 0.00029 20.2 0.1 2.4 3 0 0 3 3 3 1 EF hand p25-alpha PF05517.12 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 0.043 14.0 0.2 0.056 13.6 0.2 1.3 1 0 0 1 1 1 0 p25-alpha EF-hand_4 PF12763.7 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 0.079 12.9 1.9 0.21 11.5 1.9 1.7 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand FAM110_C PF14160.6 NODE_54440_length_321_cov_1.776224_g46509_i0forward_frame_3 - 0.12 13.4 0.0 0.2 12.7 0.0 1.3 1 0 0 1 1 1 0 Centrosome-associated C terminus TBCC PF07986.12 NODE_54439_length_321_cov_1.783217_g46508_i0reverse_frame_2 - 0.0029 17.3 2.9 0.0031 17.2 0.4 1.9 1 1 1 2 2 2 1 Tubulin binding cofactor C zf-C3H1 PF10650.9 NODE_54439_length_321_cov_1.783217_g46508_i0forward_frame_3 - 0.22 11.3 0.3 0.22 11.3 0.3 2.3 2 0 0 2 2 2 0 Putative zinc-finger domain PHD PF00628.29 NODE_54438_length_321_cov_1.793706_g46507_i0reverse_frame_2 - 0.011 15.6 3.4 0.011 15.6 3.4 2.3 2 0 0 2 2 2 0 PHD-finger PHD_2 PF13831.6 NODE_54438_length_321_cov_1.793706_g46507_i0reverse_frame_2 - 0.041 13.4 0.7 0.041 13.4 0.7 1.8 2 0 0 2 2 2 0 PHD-finger zf-B_box PF00643.24 NODE_54438_length_321_cov_1.793706_g46507_i0reverse_frame_2 - 0.81 9.9 7.0 0.6 10.3 5.2 1.8 1 1 1 2 2 2 0 B-box zinc finger Mononeg_RNA_pol PF00946.19 NODE_54434_length_321_cov_2.097902_g46503_i0forward_frame_3 - 0.055 11.1 0.1 0.11 10.1 0.1 1.4 1 1 1 2 2 2 0 Mononegavirales RNA dependent RNA polymerase Ephrin_rec_like PF07699.13 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 8.7e-18 63.8 30.4 3.9e-08 32.9 4.2 3.2 1 1 2 3 3 3 3 Putative ephrin-receptor like NCD3G PF07562.14 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 2e-08 34.0 18.5 0.0048 16.8 1.8 3.4 1 1 4 5 5 5 5 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 8.6e-07 29.3 17.0 0.019 15.3 0.1 4.8 2 2 2 4 4 4 4 TNFR/NGFR cysteine-rich region VSP PF03302.13 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 0.18 10.6 36.8 0.098 11.5 19.2 2.0 1 1 1 2 2 2 0 Giardia variant-specific surface protein DUF2318 PF10080.9 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 2 8.5 15.3 4.5 7.4 3.6 2.3 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) VP_N-CPKC PF11475.8 NODE_54432_length_321_cov_2.132867_g46501_i0reverse_frame_2 - 2.2 8.3 8.6 4.3 7.3 0.5 3.9 3 1 1 4 4 4 0 Virion protein N terminal domain CAMSAP_CH PF11971.8 NODE_54426_length_321_cov_2.363636_g46495_i0reverse_frame_3 - 0.036 13.9 0.1 0.053 13.4 0.1 1.4 1 1 0 1 1 1 0 CAMSAP CH domain Lys-AminoMut_A PF09043.11 NODE_54426_length_321_cov_2.363636_g46495_i0forward_frame_2 - 0.0091 14.5 0.7 0.01 14.4 0.7 1.0 1 0 0 1 1 1 1 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Cep57_CLD_2 PF14197.6 NODE_54426_length_321_cov_2.363636_g46495_i0forward_frame_2 - 0.014 15.4 1.3 0.027 14.5 1.3 1.5 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 Herpes_UL14 PF03580.14 NODE_54426_length_321_cov_2.363636_g46495_i0forward_frame_2 - 0.026 14.8 3.7 0.032 14.5 3.7 1.2 1 0 0 1 1 1 0 Herpesvirus UL14-like protein TMF_DNA_bd PF12329.8 NODE_54426_length_321_cov_2.363636_g46495_i0forward_frame_2 - 0.067 13.2 1.3 0.085 12.9 1.0 1.5 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Monooxygenase_B PF04744.12 NODE_54426_length_321_cov_2.363636_g46495_i0forward_frame_2 - 0.08 11.8 2.0 0.086 11.7 2.0 1.0 1 0 0 1 1 1 0 Monooxygenase subunit B protein Cache_3-Cache_2 PF17201.4 NODE_54426_length_321_cov_2.363636_g46495_i0forward_frame_2 - 0.089 12.1 5.1 0.12 11.7 5.1 1.2 1 0 0 1 1 1 0 Cache 3/Cache 2 fusion domain GlutR_dimer PF00745.20 NODE_54426_length_321_cov_2.363636_g46495_i0forward_frame_2 - 0.11 13.0 4.4 0.24 11.9 4.3 1.6 1 1 1 2 2 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain DUF148 PF02520.17 NODE_54426_length_321_cov_2.363636_g46495_i0forward_frame_2 - 1.6 8.9 13.6 5.9 7.1 13.6 1.7 1 1 0 1 1 1 0 Domain of unknown function DUF148 DUF2706 PF10913.8 NODE_54424_length_321_cov_2.395105_g46493_i0reverse_frame_2 - 0.063 13.1 1.1 0.16 11.8 1.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2706) MORN PF02493.20 NODE_54422_length_321_cov_2.486014_g46491_i0reverse_frame_3 - 9.1e-10 37.9 7.4 0.00065 19.4 0.2 3.3 3 1 0 3 3 3 2 MORN repeat Ank_2 PF12796.7 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 4.3e-19 68.9 0.5 4.5e-13 49.6 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 6.4e-13 48.5 1.3 3.3e-05 24.1 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 2e-11 44.2 0.2 1.9e-08 34.7 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 1.1e-09 38.3 0.3 1e-06 28.9 0.1 2.8 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_54421_length_321_cov_2.500000_g46490_i0reverse_frame_3 - 2.4e-09 36.7 0.2 0.01 16.3 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Pkinase PF00069.25 NODE_54420_length_321_cov_2.653846_g46489_i0forward_frame_3 - 0.0031 16.9 0.0 0.0042 16.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Atg8 PF02991.16 NODE_54414_length_321_cov_3.167832_g46483_i0forward_frame_2 - 0.014 15.6 1.1 0.016 15.4 1.1 1.1 1 0 0 1 1 1 0 Autophagy protein Atg8 ubiquitin like SCF PF02404.15 NODE_54413_length_321_cov_3.272727_g46482_i0reverse_frame_3 - 0.028 13.8 1.1 0.031 13.6 1.1 1.0 1 0 0 1 1 1 0 Stem cell factor DUF2564 PF10819.8 NODE_54413_length_321_cov_3.272727_g46482_i0reverse_frame_2 - 0.11 12.9 3.2 0.16 12.3 0.5 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF2564) DUF3368 PF11848.8 NODE_54407_length_321_cov_4.877622_g46476_i0forward_frame_3 - 0.039 13.7 0.0 0.083 12.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3368) DUF2207 PF09972.9 NODE_54407_length_321_cov_4.877622_g46476_i0forward_frame_3 - 0.29 9.9 5.5 0.34 9.6 5.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phlebovirus_G1 PF07243.11 NODE_54407_length_321_cov_4.877622_g46476_i0forward_frame_3 - 0.55 8.5 1.4 0.66 8.3 1.4 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 DUF805 PF05656.14 NODE_54407_length_321_cov_4.877622_g46476_i0forward_frame_3 - 0.76 10.2 4.2 1.1 9.7 4.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF805) ADH_zinc_N_2 PF13602.6 NODE_54403_length_321_cov_21.146853_g46472_i0reverse_frame_3 - 0.0039 18.3 0.0 0.005 17.9 0.0 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase S1 PF00575.23 NODE_54403_length_321_cov_21.146853_g46472_i0reverse_frame_3 - 0.023 15.0 3.6 0.07 13.5 3.6 1.9 1 1 0 1 1 1 0 S1 RNA binding domain DUF4974 PF16344.5 NODE_54401_length_321_cov_35.863636_g46470_i0reverse_frame_2 - 0.0071 16.3 0.2 0.01 15.8 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4974) PMT PF02366.18 NODE_54399_length_321_cov_40.339161_g46468_i0forward_frame_3 - 0.087 12.4 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Ribosomal_S18 PF01084.20 NODE_54397_length_321_cov_43.853147_g46466_i0reverse_frame_2 - 0.029 14.6 0.8 0.054 13.7 0.4 1.7 1 1 0 1 1 1 0 Ribosomal protein S18 Glyco_transf_5 PF08323.11 NODE_54396_length_321_cov_50.923077_g46465_i0forward_frame_3 - 3.6e-12 46.5 0.0 3.8e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 Starch synthase catalytic domain CEBP_ZZ PF16366.5 NODE_54396_length_321_cov_50.923077_g46465_i0forward_frame_2 - 0.032 14.4 0.1 0.045 14.0 0.1 1.3 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain PRIMA1 PF16101.5 NODE_54394_length_321_cov_60.667832_g46463_i0reverse_frame_3 - 0.22 11.6 1.1 0.34 10.9 1.1 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Nucleoporin_FG PF13634.6 NODE_54388_length_321_cov_71.472028_g46457_i0forward_frame_3 - 9.6e-11 42.4 15.7 1.6e-10 41.7 15.7 1.3 1 0 0 1 1 1 1 Nucleoporin FG repeat region MSC PF09402.10 NODE_54386_length_321_cov_73.167832_g46455_i0forward_frame_3 - 0.074 12.5 0.5 0.074 12.5 0.5 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain OPT PF03169.15 NODE_54385_length_321_cov_73.576923_g46454_i0reverse_frame_3 - 0.31 9.6 6.3 0.32 9.6 6.3 1.0 1 0 0 1 1 1 0 OPT oligopeptide transporter protein FUSC PF04632.12 NODE_54385_length_321_cov_73.576923_g46454_i0reverse_frame_3 - 1.4 7.4 6.6 1.7 7.1 6.6 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF2207 PF09972.9 NODE_54385_length_321_cov_73.576923_g46454_i0reverse_frame_3 - 6.7 5.4 5.2 7.3 5.2 5.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) SID-1_RNA_chan PF13965.6 NODE_54385_length_321_cov_73.576923_g46454_i0forward_frame_2 - 0.12 10.7 2.5 0.13 10.6 2.5 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Presenilin PF01080.17 NODE_54385_length_321_cov_73.576923_g46454_i0forward_frame_2 - 4.3 6.0 4.6 4.7 5.9 4.6 1.0 1 0 0 1 1 1 0 Presenilin PPR_2 PF13041.6 NODE_54384_length_321_cov_78.041958_g46453_i0forward_frame_2 - 8.7e-05 22.6 0.0 0.016 15.4 0.0 2.3 2 0 0 2 2 2 2 PPR repeat family PPR PF01535.20 NODE_54384_length_321_cov_78.041958_g46453_i0forward_frame_2 - 0.0051 17.0 0.4 8.2 6.9 0.0 3.2 3 0 0 3 3 3 2 PPR repeat DAP10 PF07213.11 NODE_54384_length_321_cov_78.041958_g46453_i0forward_frame_2 - 0.22 11.5 1.5 0.32 11.0 1.5 1.3 1 0 0 1 1 1 0 DAP10 membrane protein SPT6_acidic PF14632.6 NODE_54383_length_321_cov_81.255245_g46452_i0reverse_frame_2 - 2.8 8.6 25.9 0.98 10.0 3.2 2.1 2 0 0 2 2 2 0 Acidic N-terminal SPT6 Crust_neurohorm PF01147.17 NODE_54380_length_321_cov_94.311189_g46449_i0reverse_frame_2 - 0.037 13.8 1.6 0.037 13.8 1.6 1.8 2 0 0 2 2 2 0 Crustacean CHH/MIH/GIH neurohormone family Copine PF07002.16 NODE_54380_length_321_cov_94.311189_g46449_i0forward_frame_3 - 4.8e-10 39.3 0.0 5.2e-10 39.2 0.0 1.1 1 0 0 1 1 1 1 Copine zf-MYND PF01753.18 NODE_54378_length_321_cov_104.328671_g46447_i0reverse_frame_3 - 1e-10 41.5 7.8 1.4e-10 41.1 7.8 1.2 1 0 0 1 1 1 1 MYND finger zf-HIT PF04438.16 NODE_54378_length_321_cov_104.328671_g46447_i0reverse_frame_3 - 0.01 15.7 6.9 0.01 15.7 6.9 1.4 2 0 0 2 2 2 1 HIT zinc finger zf-C6H2 PF15801.5 NODE_54378_length_321_cov_104.328671_g46447_i0reverse_frame_3 - 0.01 16.1 4.7 0.02 15.2 4.7 1.5 1 1 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding Rhodanese_C PF12368.8 NODE_54378_length_321_cov_104.328671_g46447_i0reverse_frame_3 - 0.034 14.5 4.2 0.045 14.1 4.2 1.2 1 0 0 1 1 1 0 Rhodanase C-terminal C5HCH PF17982.1 NODE_54377_length_321_cov_104.779720_g46446_i0reverse_frame_3 - 0.0079 16.3 1.8 0.54 10.5 0.4 2.7 2 1 0 2 2 2 2 NSD Cys-His rich domain WD40 PF00400.32 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 9e-26 89.6 6.7 9.1e-13 48.5 1.1 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 4.2e-07 30.2 0.3 0.0016 18.7 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Ntox50 PF15542.6 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.0049 17.6 0.4 1.3 9.9 0.0 2.2 2 0 0 2 2 2 1 Bacterial toxin 50 Nup160 PF11715.8 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.0072 15.0 1.0 0.029 13.0 0.1 1.8 1 1 1 2 2 2 1 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.0074 15.3 1.6 1.4 7.8 0.2 2.2 1 1 2 3 3 3 3 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.014 14.7 0.0 0.035 13.4 0.0 1.6 1 1 0 1 1 1 0 WD40-like domain PALB2_WD40 PF16756.5 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.07 12.1 1.0 0.1 11.5 0.9 1.3 1 1 0 1 1 1 0 Partner and localizer of BRCA2 WD40 domain Cytochrom_D1 PF02239.16 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.087 11.3 0.0 0.11 11.0 0.0 1.2 1 0 0 1 1 1 0 Cytochrome D1 heme domain AsnC_trans_reg PF01037.21 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.12 12.3 0.0 1.2 9.2 0.0 2.2 2 1 0 2 2 2 0 Lrp/AsnC ligand binding domain VID27 PF08553.10 NODE_54377_length_321_cov_104.779720_g46446_i0forward_frame_3 - 0.13 11.3 0.1 0.14 11.2 0.1 1.1 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain NAD_binding_6 PF08030.12 NODE_54375_length_321_cov_118.548951_g46444_i0reverse_frame_2 - 2.2e-05 24.7 0.0 2.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Ferric reductase NAD binding domain DUF4741 PF15897.5 NODE_54372_length_321_cov_146.388112_g46441_i0reverse_frame_2 - 0.0013 18.6 0.1 0.0015 18.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4741) ubiquitin PF00240.23 NODE_54364_length_321_cov_419.073427_g46433_i0reverse_frame_2 - 1e-26 92.5 0.3 1.2e-26 92.2 0.3 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_54364_length_321_cov_419.073427_g46433_i0reverse_frame_2 - 6.2e-14 51.6 0.2 7.3e-14 51.4 0.2 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 NODE_54364_length_321_cov_419.073427_g46433_i0reverse_frame_2 - 1.6e-07 31.6 0.1 2e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 NODE_54364_length_321_cov_419.073427_g46433_i0reverse_frame_2 - 2.6e-05 24.6 0.1 7.3e-05 23.1 0.1 1.7 1 1 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 NODE_54364_length_321_cov_419.073427_g46433_i0reverse_frame_2 - 0.00095 19.3 0.1 0.0021 18.2 0.1 1.5 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 NODE_54364_length_321_cov_419.073427_g46433_i0reverse_frame_2 - 0.011 16.3 0.0 0.013 16.1 0.0 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain oligo_HPY PF08352.12 NODE_54363_length_321_cov_9440.227273_g46432_i0reverse_frame_3 - 7.7 7.1 6.5 1.3 9.6 1.1 2.5 2 1 1 3 3 3 0 Oligopeptide/dipeptide transporter, C-terminal region zf-Dof PF02701.15 ORF99470 - 0.057 13.6 1.3 1.1 9.4 0.0 2.7 3 0 0 3 3 3 0 Dof domain, zinc finger DUF2892 PF11127.8 ORF97935 - 0.3 11.1 5.7 0.59 10.2 5.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) DUF2207 PF09972.9 ORF97935 - 3.7 6.2 8.3 5 5.8 8.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Tmemb_9 PF05434.11 ORF97935 - 6.3 6.7 6.0 8.7 6.2 6.0 1.3 1 0 0 1 1 1 0 TMEM9 TniB PF05621.11 ORF97881 - 0.1 12.0 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein Med26 PF08711.11 ORF96374 - 4e-05 23.6 0.0 6.7e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 TFIIS helical bundle-like domain DUF4523 PF15023.6 ORF96243 - 0.0091 15.8 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4523) Bcl-2 PF00452.19 ORF95876 - 0.16 12.7 0.0 0.22 12.2 0.0 1.3 1 0 0 1 1 1 0 Apoptosis regulator proteins, Bcl-2 family Fer2 PF00111.27 ORF95721 - 2.5e-10 40.2 2.6 3.2e-10 39.8 2.6 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 ORF95721 - 0.055 13.5 0.4 0.055 13.5 0.4 1.7 2 1 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain UK PF02512.14 ORF95721 - 0.11 13.0 0.2 0.15 12.6 0.2 1.2 1 0 0 1 1 1 0 Virulence determinant Ubiquitin_4 PF18036.1 ORF95402 - 0.023 14.7 0.0 0.031 14.3 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-like domain Baculo_ME53 PF06061.11 ORF9442 - 0.085 12.1 0.6 0.13 11.5 0.5 1.4 1 1 0 1 1 1 0 Baculoviridae ME53 DNTTIP1_dimer PF18192.1 ORF91608 - 0.075 13.4 2.1 0.1 13.0 0.4 2.0 2 0 0 2 2 2 0 DNTTIP1 dimerisation domain DUF218 PF02698.17 ORF91123 - 0.018 15.1 0.7 0.026 14.6 0.7 1.4 1 1 0 1 1 1 0 DUF218 domain Coatomer_g_Cpla PF16381.5 ORF9001 - 1.1e-21 77.1 0.0 1.2e-21 76.9 0.0 1.0 1 0 0 1 1 1 1 Coatomer subunit gamma-1 C-terminal appendage platform Mannosyl_trans3 PF11051.8 ORF89843 - 0.084 12.2 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 Mannosyltransferase putative Disintegrin PF00200.23 ORF89128 - 0.28 12.0 8.4 0.51 11.2 8.6 1.4 1 1 0 1 1 1 0 Disintegrin PGG PF13962.6 ORF88864 - 0.0098 15.7 0.0 0.013 15.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function Bse634I PF07832.11 ORF88645 - 0.11 11.9 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Cfr10I/Bse634I restriction endonuclease DUF3123 PF11321.8 ORF88598 - 0.16 12.6 0.2 0.28 11.9 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3123) DUF956 PF06115.11 ORF88534 - 0.022 14.4 0.3 0.025 14.3 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF956) DOT1 PF08123.13 ORF87676 - 0.039 13.5 0.0 0.04 13.5 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 Copine PF07002.16 ORF87104 - 8.4e-37 126.7 0.2 9e-37 126.6 0.2 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF87104 - 5.7e-08 33.1 0.0 6.7e-08 32.9 0.0 1.0 1 0 0 1 1 1 1 vWA found in TerF C terminus VWA PF00092.28 ORF87104 - 0.019 15.2 0.0 0.02 15.1 0.0 1.1 1 0 0 1 1 1 0 von Willebrand factor type A domain Clathrin-link PF09268.10 ORF87104 - 0.06 12.7 0.0 0.18 11.2 0.0 1.9 1 0 0 1 1 1 0 Clathrin, heavy-chain linker CBFB_NFYA PF02045.15 ORF8700 - 1.5e-05 25.6 1.5 1.5e-05 25.6 1.5 2.0 2 0 0 2 2 2 1 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B RRM_1 PF00076.22 ORF86664 - 1.3e-12 47.4 0.0 2.5e-12 46.4 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PRP8_domainIV PF12134.8 ORF86664 - 0.077 12.6 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 PRP8 domain IV core LRR19-TM PF15176.6 ORF86200 - 0.096 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Keratin_B2_2 PF13885.6 ORF85848 - 0.21 11.6 14.3 4.3 7.4 9.2 2.6 2 1 0 2 2 2 0 Keratin, high sulfur B2 protein TFB6 PF17110.5 ORF85358 - 0.14 11.8 0.6 0.22 11.3 0.3 1.3 1 1 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF1904 PF08921.11 ORF83281 - 0.0047 17.2 0.6 0.006 16.9 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1904) TB2_DP1_HVA22 PF03134.19 ORF83177 - 0.017 15.0 0.2 0.021 14.8 0.2 1.3 1 0 0 1 1 1 0 TB2/DP1, HVA22 family Foamy_virus_ENV PF03408.14 ORF83177 - 0.056 11.3 1.5 0.06 11.2 1.5 1.0 1 0 0 1 1 1 0 Foamy virus envelope protein HET PF06985.11 ORF82562 - 0.025 14.9 2.4 0.041 14.2 2.4 1.3 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) PTS_IIB PF02302.17 ORF82448 - 1.6e-21 76.8 1.6 1.9e-21 76.5 1.6 1.1 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF1815 PF08844.10 ORF82448 - 0.032 14.2 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) zf-GRF PF06839.12 ORF81546 - 0.016 15.3 2.7 0.016 15.3 2.7 2.2 2 0 0 2 2 2 0 GRF zinc finger MbtH PF03621.13 ORF81168 - 1.9e-20 72.0 0.8 1.9e-20 72.0 0.8 1.9 2 1 1 3 3 3 1 MbtH-like protein DUF4121 PF13497.6 ORF80740 - 0.013 14.6 0.5 0.015 14.4 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4121) Pkinase PF00069.25 ORF79806 - 2.1e-08 33.9 0.0 2.7e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Neisseria_TspB PF05616.13 ORF79590 - 0.043 12.3 0.1 0.043 12.3 0.1 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein DUF1375 PF07119.12 ORF79393 - 2.1e-07 31.2 7.8 9.9e-06 25.9 7.8 2.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1375) LPAM_2 PF13627.6 ORF79393 - 4.7 7.2 6.3 0.48 10.3 1.5 1.9 2 0 0 2 2 2 0 Prokaryotic lipoprotein-attachment site K_channel_TID PF07941.11 ORF79312 - 2 8.9 6.2 4.1 7.9 6.2 1.5 1 1 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain Peptidase_S49_N PF08496.10 ORF79308 - 0.08 13.0 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal zf-CCHC PF00098.23 ORF77982 - 1.1e-09 37.9 1.7 3.7e-09 36.2 1.7 2.0 1 0 0 1 1 1 1 Zinc knuckle zf-CCCH PF00642.24 ORF77982 - 6.5e-06 25.9 3.8 6.5e-06 25.9 3.8 1.9 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF77982 - 2.7e-05 24.1 4.4 5.9e-05 23.0 4.4 1.6 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 ORF77982 - 0.00012 21.8 3.7 0.00024 20.8 3.7 1.6 1 0 0 1 1 1 1 CCCH-type zinc finger Torus PF16131.5 ORF77982 - 0.021 15.5 0.6 0.021 15.5 0.6 1.6 2 0 0 2 2 2 0 Torus domain zf-CCHC_6 PF15288.6 ORF77982 - 0.027 14.3 1.1 0.062 13.1 1.1 1.5 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_4 PF14392.6 ORF77982 - 0.047 13.4 0.6 0.09 12.5 0.6 1.4 1 0 0 1 1 1 0 Zinc knuckle RSB_motif PF16294.5 ORF77982 - 7.7 6.8 12.3 11 6.3 12.3 1.2 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif TniB PF05621.11 ORF77960 - 0.1 12.0 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein DNA_pack_C PF02499.15 ORF77494 - 0.021 13.8 0.4 0.024 13.6 0.4 1.1 1 0 0 1 1 1 0 Probable DNA packing protein, C-terminus VGLL4 PF15245.6 ORF76505 - 0.35 10.9 4.7 0.41 10.7 4.7 1.1 1 0 0 1 1 1 0 Transcription cofactor vestigial-like protein 4 Pkinase PF00069.25 ORF74956 - 9e-06 25.2 0.0 1.2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain APG12 PF04110.13 ORF74070 - 3.8e-21 75.3 0.0 4.4e-21 75.1 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 UPF0239 PF06783.11 ORF7297 - 0.025 14.7 0.0 0.032 14.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) DUF4083 PF13314.6 ORF72564 - 0.19 11.7 0.2 0.19 11.7 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) UCR_hinge PF02320.16 ORF72213 - 3.5e-13 49.5 0.7 4.8e-13 49.1 0.7 1.1 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein DUF996 PF06195.13 ORF71598 - 0.067 13.5 3.7 0.074 13.3 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF996) IBR PF01485.21 ORF71577 - 1.6e-10 41.0 16.6 2.4e-10 40.5 16.6 1.4 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain zf-RING_4 PF14570.6 ORF71577 - 0.051 13.4 15.6 1.5 8.7 0.2 2.4 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain DUF2300 PF10062.9 ORF71391 - 0.13 12.3 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Predicted secreted protein (DUF2300) Tir_receptor_M PF03549.14 ORF69666 - 0.11 12.9 0.1 0.21 12.0 0.1 1.4 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) intimin-binding domain IlvC PF01450.19 ORF68305 - 0.04 14.2 0.2 0.21 11.9 0.0 1.9 1 1 1 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain Bac_DNA_binding PF00216.21 ORF68305 - 0.073 13.3 0.3 0.12 12.6 0.3 1.4 1 1 0 1 1 1 0 Bacterial DNA-binding protein Glutaredoxin PF00462.24 ORF67255 - 6e-14 52.0 0.0 9.1e-14 51.4 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 ORF67255 - 0.008 16.6 0.0 0.0083 16.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain GST_N_3 PF13417.6 ORF67255 - 0.017 15.5 0.0 0.027 14.9 0.0 1.3 1 1 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 ORF67255 - 0.019 15.4 0.0 0.028 14.8 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DUF953 PF06110.11 ORF67255 - 0.075 12.7 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) Redoxin PF08534.10 ORF67255 - 0.14 11.9 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 Redoxin Trp_leader2 PF08056.11 ORF67006 - 0.092 12.7 0.1 0.17 11.9 0.1 1.4 1 0 0 1 1 1 0 Tryptophan operon leader peptide SURNod19 PF07712.12 ORF64967 - 0.043 12.6 1.0 0.046 12.5 1.0 1.1 1 0 0 1 1 1 0 Stress up-regulated Nod 19 tRNA-synt_1_2 PF13603.6 ORF63312 - 0.037 13.5 0.1 0.045 13.3 0.1 1.1 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 DUF218 PF02698.17 ORF62256 - 0.018 15.1 0.7 0.026 14.6 0.7 1.4 1 1 0 1 1 1 0 DUF218 domain AtpR PF12966.7 ORF62228 - 0.037 14.5 1.2 3.6 8.1 0.1 2.1 1 1 1 2 2 2 0 N-ATPase, AtpR subunit DUF5408 PF17402.2 ORF61695 - 6.3 6.8 6.2 0.33 10.8 1.0 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5408) Pro_isomerase PF00160.21 ORF61505 - 4.7e-22 79.0 0.1 5.1e-22 78.8 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LysM PF01476.20 ORF61429 - 7.4e-05 22.7 0.0 9.6e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 LysM domain MINDY_DUB PF04424.13 ORF61429 - 0.13 12.2 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 MINDY deubiquitinase DUF4519 PF15012.6 ORF61317 - 0.59 10.3 1.8 1.2 9.3 1.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) AtpR PF12966.7 ORF61179 - 0.037 14.5 1.2 3.6 8.1 0.1 2.1 1 1 1 2 2 2 0 N-ATPase, AtpR subunit L27 PF02828.16 ORF59509 - 0.11 12.3 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 L27 domain Cpta_toxin PF07254.12 ORF59509 - 0.67 9.9 4.0 0.43 10.6 2.4 1.5 1 1 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system FliS PF02561.14 ORF58952 - 0.26 11.5 2.7 0.65 10.3 2.7 1.6 1 1 0 1 1 1 0 Flagellar protein FliS COesterase PF00135.28 ORF58474 - 0.015 14.2 0.0 0.015 14.2 0.0 1.1 1 0 0 1 1 1 0 Carboxylesterase family Polyoma_agno PF01736.16 ORF58212 - 0.034 13.9 0.1 0.058 13.1 0.1 1.5 1 0 0 1 1 1 0 Polyomavirus agnoprotein CHORD PF04968.12 ORF57241 - 0.053 14.2 1.1 0.14 12.9 0.4 1.9 2 0 0 2 2 2 0 CHORD DUF4637 PF15470.6 ORF56721 - 0.07 12.9 1.8 0.093 12.5 1.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF1505 PF07403.11 ORF55719 - 0.07 13.3 0.2 0.083 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) TAF1D PF15333.6 ORF53004 - 2.9 7.6 5.5 3 7.5 5.5 1.1 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D DUF2909 PF11137.8 ORF52319 - 0.018 15.0 0.3 0.031 14.2 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2909) BSMAP PF12280.8 ORF52091 - 0.0017 18.6 0.2 0.0022 18.3 0.2 1.2 1 0 0 1 1 1 1 Brain specific membrane anchored protein MAP17 PF15807.5 ORF51371 - 2.7 8.2 6.8 3.6 7.8 6.8 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Pro_sub2 PF18513.1 ORF51155 - 0.03 14.5 1.6 0.059 13.6 1.6 1.7 1 1 0 1 1 1 0 Prodomain subtilisin 2 MCPsignal PF00015.21 ORF49752 - 0.016 15.0 1.2 0.019 14.8 1.2 1.2 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DASH_Duo1 PF08651.10 ORF49752 - 0.022 14.5 2.3 0.052 13.3 1.1 1.8 1 1 0 1 1 1 0 DASH complex subunit Duo1 NAAA-beta PF15508.6 ORF49752 - 0.029 14.7 3.6 0.48 10.8 2.8 2.5 1 1 1 2 2 2 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase IL32 PF15225.6 ORF49752 - 0.056 13.8 1.9 0.082 13.3 1.9 1.3 1 0 0 1 1 1 0 Interleukin 32 APG17 PF04108.12 ORF49752 - 0.058 12.5 1.5 0.061 12.4 1.5 1.1 1 0 0 1 1 1 0 Autophagy protein Apg17 PhageMin_Tail PF10145.9 ORF49752 - 0.08 12.8 1.5 0.09 12.6 1.5 1.1 1 0 0 1 1 1 0 Phage-related minor tail protein DUF948 PF06103.11 ORF49752 - 0.11 12.7 9.0 0.56 10.5 8.1 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) NCD2 PF04905.13 ORF49752 - 0.27 11.2 6.6 0.38 10.7 6.6 1.3 1 0 0 1 1 1 0 NAB conserved region 2 (NCD2) COG2 PF06148.11 ORF49752 - 0.31 11.1 6.6 0.39 10.8 6.6 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Goodbye PF17109.5 ORF49752 - 0.55 10.7 2.7 4.7 7.7 2.7 2.1 1 1 0 1 1 1 0 fungal STAND N-terminal Goodbye domain ArsA_ATPase PF02374.15 ORF49752 - 0.67 9.1 9.8 0.91 8.6 9.8 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase Bac_thur_toxin PF01338.18 ORF49752 - 1.5 8.2 9.9 2.2 7.7 9.6 1.4 1 1 0 1 1 1 0 Bacillus thuringiensis toxin phiKZ_IP PF12699.7 ORF49752 - 2.6 7.1 8.2 4.3 6.4 8.2 1.4 1 1 0 1 1 1 0 phiKZ-like phage internal head proteins MRPL52 PF18699.1 ORF49752 - 5.8 7.2 7.9 12 6.2 7.9 1.6 1 1 0 1 1 1 0 Mitoribosomal protein mL52 Imm5 PF14423.6 ORF49752 - 6.6 6.9 6.8 8.4 6.6 6.8 1.1 1 0 0 1 1 1 0 Immunity protein Imm5 Nup54 PF13874.6 ORF49752 - 7.2 6.7 9.5 19 5.4 9.5 1.7 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 TMEM208_SND2 PF05620.11 ORF49705 - 0.15 11.9 0.5 0.21 11.3 0.5 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 TAFII55_N PF04658.13 ORF49332 - 0.0042 16.8 0.1 0.0048 16.6 0.1 1.1 1 0 0 1 1 1 1 TAFII55 protein conserved region Arm PF00514.23 ORF49332 - 0.082 13.0 0.0 10 6.3 0.0 2.4 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat Ada_Zn_binding PF02805.16 ORF49211 - 0.00041 20.3 1.8 0.13 12.3 0.7 2.4 2 1 0 2 2 2 2 Metal binding domain of Ada Phage_holin_5_1 PF06946.11 ORF48512 - 0.13 12.6 0.4 0.2 12.1 0.4 1.3 1 0 0 1 1 1 0 Bacteriophage A118-like holin, Hol118 TAP35_44 PF07265.11 ORF48512 - 0.24 11.4 1.4 0.3 11.1 1.4 1.2 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 Cytochrom_C PF00034.21 ORF48319 - 2.6e-08 34.9 0.0 4.6e-08 34.1 0.0 1.4 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF48319 - 9.1e-07 29.1 0.3 3e-06 27.5 0.3 1.8 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Ish1 PF10281.9 ORF48319 - 0.0064 16.8 3.2 0.48 10.8 1.9 2.6 2 0 0 2 2 2 2 Putative stress-responsive nuclear envelope protein DUF5479 PF17575.2 ORF48210 - 0.039 14.5 0.0 0.053 14.1 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5479) YidD PF01809.18 ORF47840 - 0.00094 19.0 1.0 0.0019 18.0 1.0 1.6 1 1 0 1 1 1 1 Putative membrane protein insertion efficiency factor Stress-antifung PF01657.17 ORF47840 - 2.6 8.7 5.9 59 4.4 0.5 2.8 1 1 2 3 3 3 0 Salt stress response/antifungal HHH_7 PF14635.6 ORF46404 - 0.0053 17.1 0.0 2.7 8.4 0.1 2.1 1 1 1 2 2 2 2 Helix-hairpin-helix motif SIR2 PF02146.17 ORF46099 - 0.00038 20.4 0.0 0.00059 19.8 0.0 1.3 1 0 0 1 1 1 1 Sir2 family DUF2756 PF10956.8 ORF45221 - 0.029 14.9 2.4 0.029 14.9 2.4 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF2756) DUF4474 PF14751.6 ORF44757 - 0.12 11.8 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4474) PLA2G12 PF06951.11 ORF44588 - 0.029 14.3 0.0 0.036 14.0 0.0 1.1 1 0 0 1 1 1 0 Group XII secretory phospholipase A2 precursor (PLA2G12) Bac_small_YrzI PF09501.10 ORF43918 - 0.03 14.4 0.2 0.29 11.3 0.3 2.2 2 0 0 2 2 2 0 Probable sporulation protein (Bac_small_yrzI) CHU_C PF13585.6 ORF4377 - 0.047 13.7 0.0 0.063 13.3 0.0 1.3 1 0 0 1 1 1 0 C-terminal domain of CHU protein family PAM2 PF07145.15 ORF4377 - 0.065 12.9 0.9 0.23 11.2 0.9 2.0 1 0 0 1 1 1 0 Ataxin-2 C-terminal region Toxin_38 PF14866.6 ORF43373 - 0.0076 16.5 1.0 0.015 15.6 1.0 1.4 1 0 0 1 1 1 1 Potassium channel toxin Ge1_WD40 PF16529.5 ORF41140 - 0.037 13.0 0.2 0.037 13.0 0.2 1.0 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein DUF4744 PF15918.5 ORF41140 - 0.1 13.5 1.0 0.21 12.5 1.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4744) GTP_EFTU_D2 PF03144.25 ORF4073 - 8.6e-09 35.7 0.7 1.2e-08 35.2 0.7 1.2 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.6 ORF4073 - 0.023 14.6 0.5 0.03 14.2 0.5 1.3 1 0 0 1 1 1 0 Elongation factor Tu domain 4 DDE_Tnp_ISL3 PF01610.17 ORF39717 - 0.00071 19.4 1.4 0.00084 19.1 1.4 1.1 1 0 0 1 1 1 1 Transposase DUF1104 PF06518.11 ORF39717 - 0.11 12.9 3.3 3.1 8.2 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1104) Fumarate_red_D PF02313.17 ORF39089 - 0.011 15.8 0.5 0.014 15.5 0.5 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit D DUF996 PF06195.13 ORF38646 - 0.067 13.5 3.7 0.074 13.3 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF996) Hydant_A_N PF05378.13 ORF37492 - 0.031 14.0 0.3 0.044 13.5 0.2 1.3 1 1 0 1 1 1 0 Hydantoinase/oxoprolinase N-terminal region Med18 PF09637.10 ORF37492 - 0.037 13.8 0.4 0.039 13.8 0.4 1.1 1 0 0 1 1 1 0 Med18 protein Globin PF00042.22 ORF37034 - 0.0093 16.5 0.5 0.012 16.2 0.5 1.1 1 0 0 1 1 1 1 Globin Stomoxyn PF11585.8 ORF37034 - 0.028 14.4 0.6 0.053 13.5 0.6 1.5 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks251.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks251.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks251.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks251.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pro_sub2 PF18513.1 ORF36758 - 0.036 14.2 1.7 0.07 13.3 1.3 1.7 1 1 0 1 1 1 0 Prodomain subtilisin 2 PAP2_3 PF14378.6 ORF35591 - 0.11 12.2 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 PAP2 superfamily FliL PF03748.14 ORF35161 - 0.35 11.5 7.9 0.59 10.8 7.9 1.4 1 1 0 1 1 1 0 Flagellar basal body-associated protein FliL LTP_2 PF14368.6 ORF3431 - 0.088 12.9 0.2 0.14 12.3 0.2 1.3 1 1 0 1 1 1 0 Probable lipid transfer Ge1_WD40 PF16529.5 ORF34111 - 0.037 13.0 0.2 0.037 13.0 0.2 1.0 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein DUF4744 PF15918.5 ORF34111 - 0.1 13.5 1.0 0.21 12.5 1.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4744) SUZ PF12752.7 ORF33012 - 1.6e-09 38.3 0.4 1.6e-09 38.3 0.4 2.1 2 1 0 2 2 2 1 SUZ domain Herpes_UL17 PF04559.12 ORF33012 - 0.013 14.4 0.6 0.013 14.4 0.6 1.0 1 0 0 1 1 1 0 Herpesvirus UL17 protein FXMRP1_C_core PF12235.8 ORF33012 - 0.04 14.5 4.9 0.049 14.3 4.9 1.1 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal PROCN PF08083.11 ORF32233 - 0.15 10.8 0.1 0.17 10.6 0.1 1.0 1 0 0 1 1 1 0 PROCN (NUC071) domain Sda PF08970.10 ORF32233 - 0.3 10.9 2.2 0.37 10.6 0.4 2.0 2 1 0 2 2 2 0 Sporulation inhibitor A Oleosin PF01277.17 ORF32202 - 1.8 8.4 5.7 1.1 9.0 2.6 1.9 2 0 0 2 2 2 0 Oleosin DUF3430 PF11912.8 ORF30569 - 0.34 10.9 5.7 0.43 10.6 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3430) TonB_N PF16031.5 ORF30415 - 0.074 13.6 1.1 0.087 13.3 1.1 1.1 1 0 0 1 1 1 0 TonB polyproline region DUF1658 PF07871.11 ORF29539 - 0.021 14.8 0.1 0.021 14.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) DUF3404 PF11884.8 ORF29196 - 0.08 12.1 0.0 0.087 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) Flavodoxin_2 PF02525.17 ORF29188 - 3.3e-24 85.7 0.0 3.6e-24 85.6 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 ORF29188 - 0.01 15.6 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 0 NADPH-dependent FMN reductase YbaB_DNA_bd PF02575.16 ORF27773 - 2e-35 120.9 9.2 2.2e-35 120.7 9.2 1.0 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family CARM1 PF11531.8 ORF27773 - 0.14 12.4 0.1 0.18 12.0 0.1 1.2 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal DUF3947 PF13135.6 ORF27773 - 0.29 11.4 2.0 0.42 10.8 2.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3947) CENP-Q PF13094.6 ORF27773 - 0.35 11.1 4.5 8 6.6 0.0 2.1 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit bZIP_2 PF07716.15 ORF27773 - 3 8.0 7.6 3.8 7.7 2.6 2.2 2 0 0 2 2 2 0 Basic region leucine zipper PspB PF06667.12 ORF27773 - 3.3 7.8 4.6 22 5.2 0.1 2.2 2 0 0 2 2 2 0 Phage shock protein B SR-25 PF10500.9 ORF26702 - 3.5 7.2 10.6 4 7.0 10.6 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF5592 PF17332.2 ORF24100 - 0.56 10.8 4.9 4.6 7.9 0.9 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5592) Pribosyltran PF00156.27 ORF23976 - 4.9e-09 35.9 0.5 7.9e-09 35.2 0.5 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 ORF23976 - 0.026 14.0 0.2 0.034 13.7 0.2 1.1 1 0 0 1 1 1 0 Phosphoribosyl transferase DUF1611 PF07755.11 ORF23976 - 0.041 13.2 0.1 0.061 12.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain Saf_2TM PF18303.1 ORF2396 - 0.092 12.3 0.1 0.1 12.2 0.1 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain HCO3_cotransp PF00955.21 ORF2396 - 0.13 11.0 0.1 0.14 10.9 0.1 1.0 1 0 0 1 1 1 0 HCO3- transporter family FAM181 PF15238.6 ORF23709 - 0.018 14.9 0.2 0.022 14.7 0.2 1.0 1 0 0 1 1 1 0 FAM181 Sugar_tr PF00083.24 ORF22829 - 0.011 14.6 0.1 0.013 14.4 0.1 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter M-inducer_phosp PF06617.13 ORF22610 - 0.0046 16.3 0.3 0.0046 16.3 0.3 1.1 1 0 0 1 1 1 1 M-phase inducer phosphatase PBECR4 PF18813.1 ORF22610 - 0.015 15.5 1.5 0.018 15.3 1.5 1.0 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4 Sperm_Ag_HE2 PF05324.13 ORF22248 - 0.029 14.8 0.7 0.058 13.9 0.3 1.7 1 1 1 2 2 2 0 Sperm antigen HE2 Neisseria_TspB PF05616.13 ORF20869 - 0.043 12.3 0.1 0.043 12.3 0.1 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein DUF3341 PF11821.8 ORF1932 - 0.1 12.2 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) FAM184 PF15665.5 ORF18916 - 1.5e-10 41.2 15.2 2e-10 40.8 15.2 1.2 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B GLTSCR1 PF15249.6 ORF18916 - 0.0096 16.3 5.1 0.012 16.0 5.1 1.3 1 0 0 1 1 1 1 Conserved region of unknown function on GLTSCR protein Nab2 PF11517.8 ORF18916 - 0.032 14.5 1.6 0.077 13.3 0.4 2.0 1 1 1 2 2 2 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) Syntaxin_2 PF14523.6 ORF18916 - 0.072 13.5 10.4 0.095 13.1 10.4 1.2 1 0 0 1 1 1 0 Syntaxin-like protein DUF2935 PF11155.8 ORF18916 - 0.21 11.9 5.0 0.53 10.6 5.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) ING PF12998.7 ORF18916 - 0.38 11.4 11.2 0.2 12.2 8.1 1.8 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding LMBR1 PF04791.16 ORF18916 - 1.1 8.1 7.0 1.2 8.0 7.0 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Fib_alpha PF08702.10 ORF18916 - 1.1 9.4 11.7 1.9 8.6 10.2 1.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family IMD PF08397.11 ORF18916 - 1.9 7.8 13.1 2 7.7 13.1 1.1 1 0 0 1 1 1 0 IRSp53/MIM homology domain DUF4407 PF14362.6 ORF18916 - 2.3 7.5 9.2 2.4 7.4 9.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PRP1_N PF06424.12 ORF18916 - 4.5 7.7 13.1 12 6.3 13.1 1.6 1 1 0 1 1 1 0 PRP1 splicing factor, N-terminal Baculo_11_kDa PF06143.11 ORF18466 - 1 9.0 7.7 1.6 8.3 7.7 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family MTCP1 PF08991.10 ORF16450 - 0.074 13.3 2.8 2.8 8.2 0.3 2.3 2 0 0 2 2 2 0 Mature-T-Cell Proliferation I type FAM181 PF15238.6 ORF16443 - 0.018 14.9 0.2 0.022 14.7 0.2 1.0 1 0 0 1 1 1 0 FAM181 DUF4040 PF13244.6 ORF15385 - 0.094 12.9 0.6 0.094 12.9 0.6 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4040) DUF561 PF04481.12 ORF151947 - 0.0036 16.5 0.5 0.0039 16.4 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF561) DUF99 PF01949.16 ORF151947 - 0.13 11.7 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF99 Cpn10 PF00166.21 ORF151901 - 1.2e-22 79.7 0.0 1.4e-22 79.5 0.0 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Av_adeno_fibre PF06536.11 ORF151901 - 0.024 14.5 0.1 0.032 14.1 0.1 1.2 1 0 0 1 1 1 0 Avian adenovirus fibre, N-terminal Macro PF01661.21 ORF151028 - 0.15 12.1 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Macro domain DUF3251 PF11622.8 ORF150869 - 0.011 15.4 0.1 0.014 15.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3251) RACo_linker PF17650.1 ORF150869 - 0.081 12.8 0.1 2 8.3 0.0 2.1 2 0 0 2 2 2 0 RACo linker region Lzipper-MIP1 PF14389.6 ORF150869 - 0.097 13.0 3.9 4.9 7.5 0.1 2.1 1 1 1 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 GLE1 PF07817.13 ORF150869 - 0.2 10.8 2.5 0.23 10.6 2.5 1.2 1 0 0 1 1 1 0 GLE1-like protein BBS2_Mid PF14783.6 ORF147573 - 0.012 15.6 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, middle region PPI_Ypi1 PF07491.11 ORF147542 - 1.7e-17 62.9 10.5 4.2e-17 61.7 10.4 1.7 1 1 0 1 1 1 1 Protein phosphatase inhibitor RsgA_GTPase PF03193.16 ORF147210 - 0.0091 15.9 0.1 0.011 15.7 0.1 1.1 1 0 0 1 1 1 1 RsgA GTPase GTP_EFTU PF00009.27 ORF147210 - 0.025 14.1 0.2 0.043 13.3 0.2 1.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain Toprim_4 PF13662.6 ORF147210 - 0.12 12.8 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 Toprim domain DUF2870 PF11069.8 ORF146529 - 0.022 15.1 2.1 0.03 14.7 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2870) FAM176 PF14851.6 ORF146529 - 0.3 10.8 3.5 0.36 10.5 3.5 1.2 1 0 0 1 1 1 0 FAM176 family KCT2 PF17818.1 ORF146213 - 0.043 13.9 0.1 0.049 13.8 0.1 1.0 1 0 0 1 1 1 0 Keratinocyte-associated gene product TRIQK PF15168.6 ORF146213 - 0.053 13.4 0.9 0.053 13.4 0.9 1.6 1 1 0 1 1 1 0 Triple QxxK/R motif-containing protein family DUF5477 PF17571.2 ORF146153 - 1.4 9.2 9.8 1.3 9.2 1.6 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5477) US22 PF02393.16 ORF143803 - 0.013 15.8 0.4 0.013 15.8 0.4 1.4 1 1 0 1 1 1 0 US22 like HlyIII PF03006.20 ORF14295 - 0.023 14.4 3.4 0.026 14.3 3.4 1.0 1 0 0 1 1 1 0 Haemolysin-III related Herpes_BMRF2 PF04633.12 ORF142663 - 0.02 14.1 0.5 0.027 13.7 0.5 1.2 1 0 0 1 1 1 0 Herpesvirus BMRF2 protein DUF2368 PF10166.9 ORF142663 - 0.059 13.0 0.1 0.1 12.2 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2368) Collagen PF01391.18 ORF141131 - 0.0066 16.2 1.2 0.01 15.5 1.2 1.3 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) DHQ_synthase PF01761.20 ORF140860 - 8.3e-16 57.9 0.0 9.9e-16 57.7 0.0 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase zf-P11 PF03854.14 ORF14050 - 1.4 8.6 0.1 1.4 8.6 0.1 3.2 2 1 1 3 3 3 0 P-11 zinc finger Thioredoxin PF00085.20 ORF139809 - 1.1e-12 47.8 0.0 1.2e-12 47.7 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF139809 - 0.00047 20.4 0.2 0.17 12.3 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like AhpC-TSA PF00578.21 ORF139809 - 0.00057 19.8 0.0 0.00082 19.3 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF139809 - 0.0018 18.0 0.0 0.0022 17.7 0.0 1.1 1 0 0 1 1 1 1 Redoxin HALZ PF02183.18 ORF137759 - 0.057 13.6 0.1 0.15 12.3 0.0 1.7 2 0 0 2 2 2 0 Homeobox associated leucine zipper NRBF2 PF08961.10 ORF137759 - 0.15 11.6 3.0 0.47 10.0 1.5 1.9 1 1 1 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator Hydrolase_like PF13242.6 ORF137514 - 0.045 13.8 0.4 2 8.5 0.2 2.2 2 0 0 2 2 2 0 HAD-hyrolase-like DUF2618 PF10940.8 ORF135546 - 0.11 12.4 0.1 0.18 11.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2618) APCDDC PF14921.6 ORF13309 - 0.044 13.2 0.7 0.05 13.1 0.7 1.1 1 0 0 1 1 1 0 Adenomatosis polyposis coli down-regulated 1 Plasmodium_HRP PF05403.11 ORF132447 - 0.0022 17.8 1.7 0.0026 17.6 1.7 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF132447 - 0.15 12.0 6.5 2.3 8.2 0.6 2.4 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain HTH_39 PF14090.6 ORF132447 - 0.21 11.4 2.3 2.3 8.0 0.2 2.3 1 1 1 2 2 2 0 Helix-turn-helix domain RPA_C PF08784.11 ORF132447 - 8.9 7.0 10.9 14 6.4 5.4 2.1 1 1 1 2 2 2 0 Replication protein A C terminal CNPase PF05881.12 ORF132013 - 0.1 12.2 0.1 8.8 5.8 0.0 2.0 1 1 1 2 2 2 0 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) Waikav_capsid_1 PF12264.8 ORF132013 - 0.1 12.1 0.3 0.12 11.9 0.3 1.2 1 0 0 1 1 1 0 Waikavirus capsid protein 1 SURNod19 PF07712.12 ORF131667 - 0.043 12.6 1.0 0.046 12.5 1.0 1.1 1 0 0 1 1 1 0 Stress up-regulated Nod 19 CitMHS PF03600.16 ORF129693 - 3 6.9 11.0 5.2 6.2 11.0 1.3 1 1 0 1 1 1 0 Citrate transporter Pex24p PF06398.11 ORF129693 - 6.3 5.7 8.4 8.1 5.3 8.4 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin AtpR PF12966.7 ORF129190 - 0.037 14.5 1.2 3.6 8.1 0.1 2.1 1 1 1 2 2 2 0 N-ATPase, AtpR subunit EGF_alliinase PF04863.13 ORF128068 - 0.023 15.1 0.4 0.046 14.1 0.4 1.5 1 0 0 1 1 1 0 Alliinase EGF-like domain MCPsignal PF00015.21 ORF127662 - 0.016 15.0 1.2 0.019 14.8 1.2 1.2 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DASH_Duo1 PF08651.10 ORF127662 - 0.022 14.5 2.3 0.052 13.3 1.1 1.8 1 1 0 1 1 1 0 DASH complex subunit Duo1 NAAA-beta PF15508.6 ORF127662 - 0.029 14.7 3.6 0.48 10.8 2.8 2.5 1 1 1 2 2 2 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase IL32 PF15225.6 ORF127662 - 0.056 13.8 1.9 0.082 13.3 1.9 1.3 1 0 0 1 1 1 0 Interleukin 32 APG17 PF04108.12 ORF127662 - 0.058 12.5 1.5 0.061 12.4 1.5 1.1 1 0 0 1 1 1 0 Autophagy protein Apg17 PhageMin_Tail PF10145.9 ORF127662 - 0.08 12.8 1.5 0.09 12.6 1.5 1.1 1 0 0 1 1 1 0 Phage-related minor tail protein DUF948 PF06103.11 ORF127662 - 0.11 12.7 9.0 0.56 10.5 8.1 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) NCD2 PF04905.13 ORF127662 - 0.27 11.2 6.6 0.38 10.7 6.6 1.3 1 0 0 1 1 1 0 NAB conserved region 2 (NCD2) COG2 PF06148.11 ORF127662 - 0.31 11.1 6.6 0.39 10.8 6.6 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Goodbye PF17109.5 ORF127662 - 0.55 10.7 2.7 4.7 7.7 2.7 2.1 1 1 0 1 1 1 0 fungal STAND N-terminal Goodbye domain ArsA_ATPase PF02374.15 ORF127662 - 0.67 9.1 9.8 0.91 8.6 9.8 1.2 1 0 0 1 1 1 0 Anion-transporting ATPase Bac_thur_toxin PF01338.18 ORF127662 - 1.5 8.2 9.9 2.2 7.7 9.6 1.4 1 1 0 1 1 1 0 Bacillus thuringiensis toxin phiKZ_IP PF12699.7 ORF127662 - 2.6 7.1 8.2 4.3 6.4 8.2 1.4 1 1 0 1 1 1 0 phiKZ-like phage internal head proteins MRPL52 PF18699.1 ORF127662 - 5.8 7.2 7.9 12 6.2 7.9 1.6 1 1 0 1 1 1 0 Mitoribosomal protein mL52 Imm5 PF14423.6 ORF127662 - 6.6 6.9 6.8 8.4 6.6 6.8 1.1 1 0 0 1 1 1 0 Immunity protein Imm5 Nup54 PF13874.6 ORF127662 - 7.2 6.7 9.5 19 5.4 9.5 1.7 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 DMT_6 PF04342.12 ORF127628 - 0.057 13.6 0.3 0.074 13.3 0.3 1.2 1 0 0 1 1 1 0 Putative member of DMT superfamily (DUF486) UvsW PF11637.8 ORF126448 - 0.046 13.8 0.1 0.11 12.7 0.1 1.6 1 0 0 1 1 1 0 ATP-dependant DNA helicase UvsW UPF0242 PF06785.11 ORF125347 - 0.47 10.5 4.3 0.47 10.5 3.8 1.3 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus zf-C3HC4 PF00097.25 ORF125277 - 0.012 15.4 2.9 0.025 14.5 2.9 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF125277 - 0.14 12.1 3.2 0.29 11.0 3.2 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) M-inducer_phosp PF06617.13 ORF125180 - 0.0046 16.3 0.3 0.0046 16.3 0.3 1.1 1 0 0 1 1 1 1 M-phase inducer phosphatase PBECR4 PF18813.1 ORF125180 - 0.015 15.5 1.5 0.018 15.3 1.5 1.0 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4 Globin PF00042.22 ORF125154 - 0.0093 16.5 0.5 0.012 16.2 0.5 1.1 1 0 0 1 1 1 1 Globin Stomoxyn PF11585.8 ORF125154 - 0.028 14.4 0.6 0.053 13.5 0.6 1.5 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn DUF1368 PF07112.11 ORF123424 - 0.032 13.1 0.4 0.038 12.8 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1368) zf-C5HC2 PF02928.16 ORF12225 - 3.9e-09 36.8 14.4 5.5e-09 36.3 14.4 1.2 1 0 0 1 1 1 1 C5HC2 zinc finger UPF1_Zn_bind PF09416.10 ORF12225 - 1.5 8.7 12.5 2.8 7.9 12.4 1.5 1 1 0 1 1 1 0 RNA helicase (UPF2 interacting domain) Phage_holin_3_3 PF16083.5 ORF122245 - 0.02 15.0 0.0 0.04 14.0 0.0 1.5 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III DUF4298 PF14131.6 ORF120547 - 0.03 14.3 5.1 0.093 12.7 0.8 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) DUF4216 PF13952.6 ORF117854 - 0.27 11.6 3.2 7.3 7.1 0.6 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4216) Tecti-min-caps PF09300.10 ORF117685 - 0.19 11.8 0.0 0.28 11.3 0.0 1.2 1 0 0 1 1 1 0 Tectiviridae, minor capsid Phage_holin_5_1 PF06946.11 ORF117405 - 0.13 12.6 0.4 0.2 12.1 0.4 1.3 1 0 0 1 1 1 0 Bacteriophage A118-like holin, Hol118 TAP35_44 PF07265.11 ORF117405 - 0.24 11.4 1.4 0.3 11.1 1.4 1.2 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 DUF4620 PF15399.6 ORF116508 - 0.063 13.6 3.2 0.078 13.3 3.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4620) Cytochrom_C PF00034.21 ORF116489 - 4.1e-08 34.2 0.0 7.2e-08 33.5 0.0 1.4 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 ORF116489 - 1.7e-06 28.3 0.3 5.5e-06 26.6 0.3 1.8 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Ish1 PF10281.9 ORF116489 - 0.007 16.6 3.2 0.48 10.8 1.9 2.5 2 0 0 2 2 2 2 Putative stress-responsive nuclear envelope protein DctM PF06808.12 ORF116142 - 9.3e-27 93.9 14.2 1e-26 93.8 14.2 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component CitMHS PF03600.16 ORF116142 - 9.5e-07 28.3 13.0 1.1e-06 28.1 13.0 1.0 1 0 0 1 1 1 1 Citrate transporter EutH PF04346.12 ORF116142 - 0.18 10.9 11.0 0.28 10.3 11.0 1.3 1 1 0 1 1 1 0 Ethanolamine utilisation protein, EutH DcuC PF03606.15 ORF116142 - 0.23 9.9 7.0 0.35 9.3 7.0 1.3 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier Herpes_LMP1 PF05297.11 ORF115542 - 1.6 7.8 4.5 1.9 7.6 4.5 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Aminotran_1_2 PF00155.21 ORF114374 - 0.14 11.3 0.0 0.15 11.2 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II DUF2007 PF09413.10 ORF113490 - 0.14 12.3 0.0 0.18 12.0 0.0 1.4 1 1 0 1 1 1 0 Putative prokaryotic signal transducing protein Closter_coat PF01785.17 ORF113409 - 0.00034 19.9 0.0 0.00041 19.7 0.0 1.1 1 0 0 1 1 1 1 Closterovirus coat protein DUF872 PF05915.12 ORF112771 - 1.7 8.9 8.0 2.9 8.1 8.0 1.6 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Pex24p PF06398.11 ORF112771 - 4.3 6.2 8.5 5.3 5.9 8.5 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin zf-like PF04071.12 ORF111647 - 0.011 15.6 1.1 0.016 15.1 1.1 1.2 1 0 0 1 1 1 0 Cysteine-rich small domain DiS_P_DiS PF06750.13 ORF11074 - 0.043 13.9 3.3 0.043 13.9 3.3 1.2 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain AZUL PF16558.5 ORF108946 - 1.6 9.0 9.7 6.9 7.0 0.3 2.8 3 0 0 3 3 3 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A A2L_zn_ribbon PF08792.10 ORF108882 - 0.021 14.5 5.2 0.021 14.5 5.2 3.2 2 2 1 3 3 3 0 A2L zinc ribbon domain ubiquitin PF00240.23 ORF108559 - 2.2e-06 27.3 0.0 2.7e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF108559 - 0.0067 16.2 0.0 0.0084 15.9 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like TerY_C PF15616.6 ORF107267 - 0.89 9.7 12.4 1 9.4 12.4 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain Ribosomal_L23 PF00276.20 ORF107117 - 0.13 12.6 0.0 0.21 12.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L23 KLRAQ PF10205.9 ORF106513 - 0.042 14.1 0.2 0.042 14.1 0.2 1.5 2 0 0 2 2 2 0 Predicted coiled-coil domain-containing protein Tubulin_C PF03953.17 ORF106378 - 3.5e-23 82.1 0.0 4.1e-23 81.9 0.0 1.1 1 0 0 1 1 1 1 Tubulin C-terminal domain DUF5389 PF17364.2 ORF105661 - 0.031 14.3 1.0 0.035 14.2 1.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5389) ChW PF07538.11 ORF105609 - 0.0072 16.2 0.5 0.057 13.4 0.1 2.2 2 0 0 2 2 2 1 Clostridial hydrophobic W HisG_C PF08029.11 ORF105130 - 0.14 12.3 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 HisG, C-terminal domain AAA_5 PF07728.14 ORF104773 - 0.13 12.2 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF5086 PF16985.5 ORF104223 - 0.1 12.5 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5086) ANATO PF01821.18 ORF103697 - 0.59 11.0 5.3 3.6 8.5 1.7 2.5 2 1 0 2 2 2 0 Anaphylotoxin-like domain MMM1 PF10296.9 ORF102368 - 0.1 11.7 5.5 0.11 11.6 5.5 1.1 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 CobT PF06213.12 ORF102368 - 0.59 9.5 9.7 0.59 9.5 9.7 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT DUF3464 PF11947.8 ORF102368 - 1.4 8.7 11.3 1.6 8.4 11.3 1.4 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 EIIBC-GUT_N PF03612.14 ORF102368 - 2.2 8.0 6.7 2.4 7.9 6.7 1.2 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus CLN3 PF02487.17 ORF102368 - 3.5 6.6 5.2 3.5 6.6 5.2 1.0 1 0 0 1 1 1 0 CLN3 protein RNA_pol_Rpc4 PF05132.14 ORF102368 - 4 7.9 12.7 4.4 7.7 12.7 1.3 1 0 0 1 1 1 0 RNA polymerase III RPC4 Sox_N PF12444.8 ORF102368 - 4 8.6 10.9 6.7 7.9 10.9 1.4 1 0 0 1 1 1 0 Sox developmental protein N terminal YqfQ PF14181.6 ORF102368 - 4 7.6 13.1 4.6 7.4 13.1 1.2 1 0 0 1 1 1 0 YqfQ-like protein CDC45 PF02724.14 ORF102368 - 4.2 5.5 19.9 4.6 5.4 19.9 1.0 1 0 0 1 1 1 0 CDC45-like protein Zip PF02535.22 ORF102368 - 5 6.2 9.4 4.7 6.3 9.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF4614 PF15391.6 ORF102368 - 5.5 7.0 12.5 6.3 6.7 12.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) Tim54 PF11711.8 ORF102368 - 6.8 5.4 14.4 7.7 5.2 14.4 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Folate_carrier PF01770.18 ORF102368 - 7.8 5.1 4.8 7.7 5.1 4.8 1.2 1 0 0 1 1 1 0 Reduced folate carrier SspB PF04386.13 ORF102368 - 8.4 6.3 8.0 9 6.2 8.0 1.3 1 0 0 1 1 1 0 Stringent starvation protein B DUF3438 PF11920.8 ORF102368 - 8.5 5.5 6.5 10 5.3 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) RNA_polI_A34 PF08208.11 ORF102368 - 9 6.3 27.1 9 6.3 27.1 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF1216 PF06746.11 ORF101457 - 0.0088 16.1 3.9 0.01 15.9 3.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1216) D5_N PF08706.11 ORF101457 - 0.1 12.9 0.9 0.12 12.6 0.9 1.2 1 0 0 1 1 1 0 D5 N terminal like PolC_DP2 PF03833.13 ORF101367 - 2.8 5.7 3.8 3.1 5.5 3.8 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 CHASE9 PF17153.4 ORF100718 - 0.029 14.5 0.3 0.038 14.1 0.3 1.4 1 1 0 1 1 1 0 Periplasmic sensor domain, extracellular Ncstrn_small PF18266.1 NODE_55260_length_313_cov_1.640288_g47326_i0reverse_frame_1 - 0.12 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Nicastrin small lobe DUF5429 PF17494.2 NODE_55258_length_313_cov_1.723022_g47324_i0forward_frame_1 - 0.056 13.5 0.9 0.08 13.0 0.9 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5429) SfsA PF03749.13 NODE_55253_length_313_cov_1.809353_g47319_i0reverse_frame_1 - 0.057 13.3 0.3 0.072 13.0 0.3 1.3 1 1 0 1 1 1 0 Sugar fermentation stimulation protein RE domain DUF570 PF04489.13 NODE_55253_length_313_cov_1.809353_g47319_i0reverse_frame_1 - 0.084 11.5 0.2 0.094 11.3 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF570) Aldedh PF00171.22 NODE_55252_length_313_cov_1.924460_g47318_i0forward_frame_1 - 1.2e-09 37.3 5.0 1.2e-09 37.2 5.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family APC_u9 PF16633.5 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.011 16.7 0.6 0.018 16.1 0.6 1.4 1 0 0 1 1 1 0 Unstructured region on APC between 1st two creatine-rich regions EBV-NA3 PF05009.12 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.04 13.4 2.0 0.046 13.3 2.0 1.0 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) TMPIT PF07851.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.061 12.6 9.4 0.071 12.3 9.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein TMF_TATA_bd PF12325.8 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.11 12.7 17.8 0.28 11.4 1.1 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Caskin-Pro-rich PF16907.5 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.11 13.0 0.4 0.16 12.5 0.4 1.2 1 0 0 1 1 1 0 Proline rich region of Caskin proteins DUF5082 PF16888.5 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.12 12.6 14.3 0.45 10.8 3.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) PCRF PF03462.18 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.14 12.0 10.6 0.17 11.8 10.6 1.1 1 0 0 1 1 1 0 PCRF domain DUF3450 PF11932.8 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.34 10.2 14.8 1 8.6 14.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FapA PF03961.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.51 8.9 10.6 0.61 8.6 10.6 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF724 PF05266.14 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.68 9.7 12.3 0.85 9.4 12.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DivIVA PF05103.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 0.71 10.0 13.0 1.1 9.3 13.0 1.4 1 1 0 1 1 1 0 DivIVA protein DUF1664 PF07889.12 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 1.2 9.2 9.7 6.1 6.9 3.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) YabA PF06156.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 1.4 9.6 10.8 6.4 7.5 5.9 2.2 2 0 0 2 2 2 0 Initiation control protein YabA PEP-utilisers_N PF05524.13 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 1.4 9.1 6.3 2.4 8.4 6.3 1.4 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal DUF4140 PF13600.6 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 1.6 9.3 8.4 2.4e+02 2.2 8.4 2.2 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DivIC PF04977.15 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 4 7.3 12.8 0.49 10.2 4.6 2.7 1 1 2 3 3 3 0 Septum formation initiator Bcr-Abl_Oligo PF09036.10 NODE_55249_length_313_cov_2.025180_g47315_i0reverse_frame_1 - 6.2 6.9 10.0 3.6 7.7 4.2 2.2 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain APC_u9 PF16633.5 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.011 16.7 0.6 0.018 16.1 0.6 1.4 1 0 0 1 1 1 0 Unstructured region on APC between 1st two creatine-rich regions EBV-NA3 PF05009.12 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.04 13.4 2.0 0.046 13.3 2.0 1.0 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) TMPIT PF07851.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.061 12.6 9.4 0.071 12.3 9.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein TMF_TATA_bd PF12325.8 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.11 12.7 17.8 0.28 11.4 1.1 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Caskin-Pro-rich PF16907.5 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.11 13.0 0.4 0.16 12.5 0.4 1.2 1 0 0 1 1 1 0 Proline rich region of Caskin proteins DUF5082 PF16888.5 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.12 12.6 14.3 0.45 10.8 3.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) PCRF PF03462.18 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.14 12.0 10.6 0.17 11.8 10.6 1.1 1 0 0 1 1 1 0 PCRF domain DUF3450 PF11932.8 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.34 10.2 14.8 1 8.6 14.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FapA PF03961.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.51 8.9 10.6 0.61 8.6 10.6 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF724 PF05266.14 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.68 9.7 12.3 0.85 9.4 12.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DivIVA PF05103.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 0.71 10.0 13.0 1.1 9.3 13.0 1.4 1 1 0 1 1 1 0 DivIVA protein DUF1664 PF07889.12 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 1.2 9.2 9.7 6.1 6.9 3.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) YabA PF06156.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 1.4 9.6 10.8 6.4 7.5 5.9 2.2 2 0 0 2 2 2 0 Initiation control protein YabA PEP-utilisers_N PF05524.13 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 1.4 9.1 6.3 2.4 8.4 6.3 1.4 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal DUF4140 PF13600.6 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 1.6 9.3 8.4 2.4e+02 2.2 8.4 2.2 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DivIC PF04977.15 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 4 7.3 12.8 0.49 10.2 4.6 2.7 1 1 2 3 3 3 0 Septum formation initiator Bcr-Abl_Oligo PF09036.10 NODE_55242_length_313_cov_2.169065_g47308_i0reverse_frame_1 - 6.2 6.9 10.0 3.6 7.7 4.2 2.2 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain Pkinase PF00069.25 NODE_55237_length_313_cov_2.374101_g47303_i0reverse_frame_1 - 3.4e-25 88.9 0.0 3.7e-25 88.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_55237_length_313_cov_2.374101_g47303_i0reverse_frame_1 - 3.4e-11 42.9 0.0 3.7e-11 42.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 NODE_55237_length_313_cov_2.374101_g47303_i0reverse_frame_1 - 0.2 11.5 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF3951 PF13131.6 NODE_55234_length_313_cov_2.543165_g47300_i0reverse_frame_1 - 0.019 15.1 0.4 0.034 14.3 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3951) TMEM232 PF15877.5 NODE_55234_length_313_cov_2.543165_g47300_i0forward_frame_1 - 0.05 12.6 2.8 0.056 12.4 2.8 1.0 1 0 0 1 1 1 0 Transmembrane protein family 232 NPR3 PF03666.13 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_1 - 1.8 7.3 10.8 2 7.1 10.8 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 SPX PF03105.19 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_1 - 7.1 6.4 21.3 7.7 6.3 21.3 1.0 1 0 0 1 1 1 0 SPX domain Apt1 PF10351.9 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_1 - 9.5 4.9 25.4 10 4.8 25.4 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain zf-ribbon_3 PF13248.6 NODE_55231_length_313_cov_2.737410_g47297_i0reverse_frame_1 - 0.031 13.7 1.7 0.031 13.7 1.7 1.7 2 0 0 2 2 2 0 zinc-ribbon domain ADK_lid PF05191.14 NODE_55231_length_313_cov_2.737410_g47297_i0reverse_frame_1 - 0.033 14.2 0.1 0.059 13.4 0.1 1.4 1 0 0 1 1 1 0 Adenylate kinase, active site lid DUF5549 PF17703.1 NODE_55225_length_313_cov_3.341727_g47291_i0reverse_frame_1 - 0.28 10.8 9.5 0.33 10.6 9.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) Holin_BhlA PF10960.8 NODE_55221_length_313_cov_3.420863_g47287_i0forward_frame_1 - 0.054 13.5 1.8 0.12 12.4 0.7 2.0 1 1 1 2 2 2 0 BhlA holin family DUF3685 PF12452.8 NODE_55221_length_313_cov_3.420863_g47287_i0forward_frame_1 - 0.11 12.1 1.0 0.15 11.7 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) AAA_19 PF13245.6 NODE_55215_length_313_cov_20.766187_g47281_i0forward_frame_1 - 0.0094 16.3 0.1 0.01 16.2 0.1 1.2 1 0 0 1 1 1 1 AAA domain DUF5314 PF17241.2 NODE_55212_length_313_cov_42.604317_g47278_i0forward_frame_1 - 0.0083 15.8 0.0 0.011 15.4 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5314) HemY_N PF07219.13 NODE_55204_length_313_cov_61.377698_g47270_i0forward_frame_1 - 0.029 14.5 1.3 0.047 13.9 0.5 1.7 2 0 0 2 2 2 0 HemY protein N-terminus RRM_1 PF00076.22 NODE_55202_length_313_cov_73.532374_g47268_i0reverse_frame_1 - 6.6e-20 70.7 0.0 9.6e-20 70.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_55202_length_313_cov_73.532374_g47268_i0reverse_frame_1 - 0.025 14.7 0.1 0.04 14.0 0.1 1.6 1 1 0 1 1 1 0 RNA recognition motif AbiGi PF10899.8 NODE_55188_length_313_cov_117.931655_g47254_i0reverse_frame_1 - 0.15 11.9 0.6 0.19 11.5 0.6 1.1 1 0 0 1 1 1 0 Putative abortive phage resistance protein AbiGi, antitoxin DUF4679 PF15728.5 NODE_55187_length_313_cov_124.715827_g47253_i0reverse_frame_1 - 0.021 13.9 0.0 0.024 13.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) DUF5312 PF17239.2 NODE_55186_length_313_cov_126.111511_g47252_i0reverse_frame_1 - 0.0018 16.7 0.3 0.0022 16.4 0.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5312) Proton_antipo_M PF00361.20 NODE_55185_length_313_cov_130.820144_g47251_i0reverse_frame_1 - 0.081 12.1 3.7 0.086 12.0 3.7 1.0 1 0 0 1 1 1 0 Proton-conducting membrane transporter Phage_antitermQ PF06530.12 NODE_55180_length_313_cov_146.316547_g47246_i0reverse_frame_1 - 0.16 11.9 0.1 0.22 11.5 0.1 1.3 1 0 0 1 1 1 0 Phage antitermination protein Q SARS_3b PF12383.8 NODE_55180_length_313_cov_146.316547_g47246_i0forward_frame_1 - 0.061 13.5 0.6 0.098 12.8 0.3 1.5 1 1 0 1 1 1 0 Severe acute respiratory syndrome coronavirus 3b protein RCC1_2 PF13540.6 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.00051 19.8 2.7 0.35 10.7 0.2 2.6 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.062 13.4 0.1 5.3 7.1 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 DpnD-PcfM PF14207.6 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.069 13.0 0.2 39 4.2 0.0 3.0 3 0 0 3 3 3 0 DpnD/PcfM-like protein Cyclophil_like PF04126.13 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.074 12.9 0.0 5.9 6.7 0.0 2.0 1 1 1 2 2 2 0 Cyclophilin-like Methyltransf_29 PF03141.16 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.12 10.9 0.2 9.7 4.6 0.0 2.7 3 0 0 3 3 3 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Phage_holin_7_1 PF16081.5 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.16 12.2 8.4 0.92 9.7 0.5 2.7 1 1 2 3 3 3 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family PheRS_DBD2 PF18554.1 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_1 - 0.5 10.4 14.4 4.5 7.3 0.9 3.2 3 0 0 3 3 3 0 PheRS DNA binding domain 2 Sel_put PF04328.13 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_1 - 0.00012 22.0 16.3 0.0091 16.0 3.6 2.3 2 0 0 2 2 2 2 Selenoprotein, putative CAMSAP_CC1 PF17095.5 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_1 - 0.013 15.4 3.7 1.2 9.1 0.1 2.9 3 0 0 3 3 3 0 Spectrin-binding region of Ca2+-Calmodulin Dickkopf_N PF04706.12 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_1 - 0.14 12.6 3.8 5.3 7.6 0.5 2.3 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region XRCC4 PF06632.12 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_1 - 2.2 7.0 3.9 2 7.2 0.6 1.7 1 1 1 2 2 2 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 Me-amine-dh_L PF02975.14 NODE_55168_length_313_cov_16420.741007_g47234_i0forward_frame_1 - 0.18 12.3 2.8 2.1 8.9 0.1 2.2 1 1 1 2 2 2 0 Methylamine dehydrogenase, L chain YjcB PF15940.5 NODE_55168_length_313_cov_16420.741007_g47234_i0forward_frame_1 - 0.39 10.9 1.2 3.1 8.0 0.4 2.0 1 1 1 2 2 2 0 Family of unknown function Mycobact_memb PF05423.13 NODE_55162_length_314_cov_1.275986_g47228_i0reverse_frame_1 - 0.017 15.0 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 Mycobacterium membrane protein Acyl-CoA_dh_1 PF00441.24 NODE_55162_length_314_cov_1.275986_g47228_i0forward_frame_1 - 4.9e-19 69.0 0.1 5.4e-19 68.9 0.1 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Chlam_PMP PF02415.17 NODE_55159_length_314_cov_1.437276_g47225_i0reverse_frame_1 - 4.2 8.1 0.1 4.2 8.1 0.1 3.9 3 1 0 3 3 3 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Unpaired PF15972.5 NODE_55157_length_314_cov_1.491039_g47223_i0reverse_frame_1 - 0.019 14.5 0.3 0.022 14.3 0.3 1.1 1 0 0 1 1 1 0 Unpaired protein DUF4173 PF13777.6 NODE_55150_length_314_cov_1.706093_g47216_i0reverse_frame_1 - 0.021 14.3 0.5 0.021 14.3 0.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4173) DctQ PF04290.12 NODE_55147_length_314_cov_1.781362_g47213_i0forward_frame_1 - 7e-27 93.9 4.1 7.6e-27 93.8 4.1 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporters, DctQ component Baculo_VP91_N PF08475.10 NODE_55145_length_314_cov_1.810036_g47211_i0reverse_frame_1 - 0.024 14.3 1.9 0.032 13.9 1.9 1.1 1 0 0 1 1 1 0 Viral capsid protein 91 N-terminal APA3_viroporin PF11289.8 NODE_55144_length_314_cov_1.989247_g47210_i0reverse_frame_1 - 0.13 11.8 0.7 0.13 11.8 0.7 1.2 1 0 0 1 1 1 0 Coronavirus accessory protein 3a Xan_ur_permease PF00860.20 NODE_55128_length_314_cov_2.677419_g47194_i0forward_frame_1 - 1.5e-22 79.9 8.5 1.7e-22 79.7 8.5 1.0 1 0 0 1 1 1 1 Permease family Ank_2 PF12796.7 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 1e-12 48.4 0.1 1.2e-09 38.6 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 1.6e-10 41.0 0.0 7.9e-05 22.9 0.0 2.3 2 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 7.9e-10 39.1 0.0 0.0018 18.8 0.0 3.0 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 6.4e-09 35.9 0.3 0.00076 19.8 0.0 3.1 3 1 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_55127_length_314_cov_2.713262_g47193_i0forward_frame_1 - 2.5e-07 30.5 0.2 0.024 15.1 0.0 3.3 4 0 0 4 4 4 2 Ankyrin repeat Molybdop_Fe4S4 PF04879.16 NODE_55125_length_314_cov_2.738351_g47191_i0reverse_frame_1 - 0.00018 21.4 0.0 0.00025 21.0 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Nitr_red_alph_N PF14710.6 NODE_55125_length_314_cov_2.738351_g47191_i0reverse_frame_1 - 0.00088 19.7 7.2 0.0009 19.6 5.7 1.9 2 0 0 2 2 2 1 Respiratory nitrate reductase alpha N-terminal DUF4992 PF16383.5 NODE_55123_length_314_cov_2.777778_g47189_i0reverse_frame_1 - 0.0015 18.1 0.1 0.0018 17.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function SF3A3 PF16837.5 NODE_55123_length_314_cov_2.777778_g47189_i0reverse_frame_1 - 0.032 14.7 0.1 0.042 14.4 0.1 1.3 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 DUF2644 PF10841.8 NODE_55122_length_314_cov_2.831541_g47188_i0forward_frame_1 - 0.11 12.8 1.2 0.17 12.1 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) TB2_DP1_HVA22 PF03134.19 NODE_55121_length_314_cov_2.910394_g47187_i0reverse_frame_1 - 0.074 13.0 6.6 1.1 9.3 2.2 2.1 2 0 0 2 2 2 0 TB2/DP1, HVA22 family Arc_C PF18162.1 NODE_55119_length_314_cov_3.107527_g47185_i0reverse_frame_1 - 0.017 15.0 0.0 0.022 14.6 0.0 1.2 1 0 0 1 1 1 0 Arc C-lobe DUF3083 PF11281.8 NODE_55119_length_314_cov_3.107527_g47185_i0reverse_frame_1 - 0.096 12.0 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3083) TPR_22 PF18833.1 NODE_55117_length_314_cov_3.415771_g47183_i0forward_frame_1 - 0.02 15.0 0.2 0.034 14.3 0.2 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat DPM3 PF08285.11 NODE_55113_length_314_cov_3.691756_g47179_i0forward_frame_1 - 0.091 13.0 3.2 0.13 12.5 3.2 1.2 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Titin_Ig-rpts PF06582.12 NODE_55107_length_314_cov_9.745520_g47173_i0reverse_frame_1 - 0.057 13.4 1.6 7.3 6.6 0.1 2.4 2 0 0 2 2 2 0 Titin repeat Cupredoxin_1 PF13473.6 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.012 15.7 1.7 0.028 14.5 1.0 1.8 1 1 1 2 2 2 0 Cupredoxin-like domain WXG100 PF06013.12 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.017 15.3 0.6 0.034 14.4 0.6 1.5 1 0 0 1 1 1 0 Proteins of 100 residues with WXG DUF3836 PF12930.7 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.02 14.7 5.1 0.024 14.4 5.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF3836) MauJ PF17419.2 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.023 14.2 0.1 0.027 14.0 0.1 1.1 1 0 0 1 1 1 0 Methylamine utilization protein MauJ DUF1525 PF07511.11 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.038 14.1 1.2 0.049 13.8 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1525) Rogdi_lz PF10259.9 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.041 13.3 2.5 0.048 13.1 2.5 1.3 1 1 0 1 1 1 0 Rogdi leucine zipper containing protein Atg14 PF10186.9 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.17 10.9 6.4 0.18 10.8 6.4 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 RPW8 PF05659.11 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.2 11.3 9.3 0.97 9.1 9.3 1.9 1 1 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 SlyX PF04102.12 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.39 11.4 5.6 19 5.9 7.0 2.1 1 1 1 2 2 2 0 SlyX DUF4140 PF13600.6 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 0.58 10.6 4.9 1 9.8 4.9 1.6 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) EMP24_GP25L PF01105.24 NODE_55106_length_314_cov_27.655914_g47172_i0reverse_frame_1 - 1.5 8.7 8.3 7.9 6.4 8.3 1.8 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD TetR_C_31 PF17940.1 NODE_55104_length_314_cov_57.867384_g47170_i0reverse_frame_1 - 0.017 15.3 0.3 0.058 13.6 0.1 1.9 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain ICAM_N PF03921.14 NODE_55103_length_314_cov_59.129032_g47169_i0reverse_frame_1 - 0.2 11.4 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain Spem1 PF15670.5 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 0.024 14.3 14.5 0.026 14.1 14.5 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF2828 PF11443.8 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 0.76 7.8 10.1 0.75 7.8 10.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) DUF1682 PF07946.14 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 1.1 8.4 13.7 1.2 8.3 13.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) EMC3_TMCO1 PF01956.16 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 3.6 7.3 7.6 4.3 7.1 7.6 1.2 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like EOS1 PF12326.8 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 4.3 7.2 6.6 5.1 7.0 6.6 1.1 1 0 0 1 1 1 0 N-glycosylation protein TT_ORF1 PF02956.14 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 8.5 4.9 19.1 7.5 5.1 19.1 1.1 1 0 0 1 1 1 0 TT viral orf 1 Presenilin PF01080.17 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 8.5 5.0 5.5 8.9 5.0 5.5 1.1 1 0 0 1 1 1 0 Presenilin Connexin PF00029.19 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_1 - 9.6 5.9 7.6 11 5.7 7.6 1.1 1 0 0 1 1 1 0 Connexin Sacchrp_dh_NADP PF03435.18 NODE_55094_length_314_cov_71.032258_g47160_i0reverse_frame_1 - 0.11 12.8 0.2 0.18 12.1 0.2 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Glyco_hydro_62 PF03664.13 NODE_55092_length_314_cov_74.311828_g47158_i0forward_frame_1 - 0.084 12.2 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 62 PAP2 PF01569.21 NODE_55090_length_314_cov_77.433692_g47156_i0forward_frame_1 - 0.0049 16.6 0.8 0.0059 16.4 0.7 1.3 1 1 0 1 1 1 1 PAP2 superfamily DUF4672 PF15716.5 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_1 - 0.0041 16.8 2.2 0.0048 16.6 2.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4672) DUF836 PF05768.14 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_1 - 0.1 13.0 4.5 7.1 7.1 0.0 2.1 2 0 0 2 2 2 0 Glutaredoxin-like domain (DUF836) DUF3403 PF11883.8 NODE_55077_length_314_cov_143.688172_g47143_i0reverse_frame_1 - 0.0096 16.0 0.3 0.014 15.5 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3403) DUF3439 PF11921.8 NODE_55076_length_314_cov_192.770609_g47142_i0reverse_frame_1 - 0.11 12.5 0.2 0.19 11.7 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3439) DiS_P_DiS PF06750.13 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_1 - 0.016 15.3 0.7 24 5.1 0.0 3.0 3 0 0 3 3 3 0 Bacterial Peptidase A24 N-terminal domain T_cell_tran_alt PF15128.6 NODE_55071_length_314_cov_1119.318996_g47137_i0forward_frame_1 - 1.8 8.4 3.6 3.6 7.4 1.5 2.1 2 1 0 2 2 2 0 T-cell leukemia translocation-altered zf-RING_6 PF14835.6 NODE_55060_length_315_cov_1.432143_g47126_i0reverse_frame_1 - 0.37 10.7 4.6 0.67 9.9 4.6 1.4 1 1 0 1 1 1 0 zf-RING of BARD1-type protein TIG PF01833.24 NODE_55060_length_315_cov_1.432143_g47126_i0forward_frame_1 - 0.03 14.4 0.1 0.041 14.0 0.1 1.2 1 0 0 1 1 1 0 IPT/TIG domain DUF1775 PF07987.11 NODE_55060_length_315_cov_1.432143_g47126_i0forward_frame_1 - 0.035 14.4 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unkown function (DUF1775) YsaB PF13983.6 NODE_55060_length_315_cov_1.432143_g47126_i0forward_frame_1 - 0.11 12.8 0.4 0.2 12.0 0.3 1.5 1 1 0 1 1 1 0 YsaB-like lipoprotein DUF4641 PF15483.6 NODE_55057_length_315_cov_1.567857_g47123_i0reverse_frame_1 - 0.044 12.9 3.6 0.051 12.7 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4641) Fra10Ac1 PF09725.9 NODE_55057_length_315_cov_1.567857_g47123_i0reverse_frame_1 - 0.049 13.7 0.1 0.091 12.8 0.1 1.4 1 0 0 1 1 1 0 Folate-sensitive fragile site protein Fra10Ac1 Defensin_beta PF00711.19 NODE_55057_length_315_cov_1.567857_g47123_i0reverse_frame_1 - 2.2 8.4 5.2 0.45 10.6 0.7 2.0 2 1 0 2 2 2 0 Beta defensin 7TMR-DISM_7TM PF07695.11 NODE_55055_length_315_cov_1.582143_g47121_i0reverse_frame_1 - 0.0065 16.4 5.0 0.0083 16.0 5.0 1.1 1 0 0 1 1 1 1 7TM diverse intracellular signalling PAP2_C PF14360.6 NODE_55055_length_315_cov_1.582143_g47121_i0reverse_frame_1 - 0.89 10.1 11.2 1e+03 0.3 11.2 2.4 1 1 0 1 1 1 0 PAP2 superfamily C-terminal ICE2 PF08426.10 NODE_55055_length_315_cov_1.582143_g47121_i0forward_frame_1 - 0.054 12.6 0.1 0.06 12.5 0.1 1.1 1 0 0 1 1 1 0 ICE2 FAM209 PF15206.6 NODE_55055_length_315_cov_1.582143_g47121_i0forward_frame_1 - 0.056 13.2 0.1 0.067 13.0 0.1 1.1 1 0 0 1 1 1 0 FAM209 family Gram_pos_anchor PF00746.21 NODE_55050_length_315_cov_1.728571_g47116_i0forward_frame_1 - 0.52 10.3 2.0 0.66 10.0 2.0 1.1 1 0 0 1 1 1 0 LPXTG cell wall anchor motif NUDE_C PF04880.13 NODE_55044_length_315_cov_1.953571_g47110_i0forward_frame_1 - 0.046 14.2 0.2 0.053 14.0 0.2 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Trns_repr_metal PF02583.17 NODE_55029_length_315_cov_2.425000_g47095_i0forward_frame_1 - 0.0042 17.4 0.2 0.0061 16.9 0.2 1.2 1 0 0 1 1 1 1 Metal-sensitive transcriptional repressor CYTL1 PF15153.6 NODE_55029_length_315_cov_2.425000_g47095_i0forward_frame_1 - 0.042 13.8 1.6 0.057 13.4 1.6 1.2 1 0 0 1 1 1 0 Cytokine-like protein 1 Annexin PF00191.20 NODE_55029_length_315_cov_2.425000_g47095_i0forward_frame_1 - 0.16 12.1 0.1 0.95 9.6 0.1 2.0 2 0 0 2 2 2 0 Annexin DUF4698 PF15769.5 NODE_55028_length_315_cov_2.432143_g47094_i0forward_frame_1 - 0.045 12.8 1.8 0.047 12.7 1.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4698) HTH_7 PF02796.15 NODE_55022_length_315_cov_2.850000_g47088_i0forward_frame_1 - 0.0016 18.4 0.0 0.0026 17.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase GNVR PF13807.6 NODE_55021_length_315_cov_2.932143_g47087_i0forward_frame_1 - 0.078 12.9 0.2 0.18 11.7 0.2 1.7 1 1 0 1 1 1 0 G-rich domain on putative tyrosine kinase PAN_4 PF14295.6 NODE_55017_length_315_cov_3.750000_g47083_i0forward_frame_1 - 0.056 13.4 0.8 0.089 12.7 0.8 1.3 1 0 0 1 1 1 0 PAN domain DUF1989 PF09347.10 NODE_55016_length_315_cov_4.771429_g47082_i0forward_frame_1 - 0.11 12.2 1.0 0.13 11.9 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) Babuvirus_MP PF07234.11 NODE_55015_length_315_cov_7.596429_g47081_i0reverse_frame_1 - 0.11 12.7 1.0 0.15 12.3 1.0 1.2 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF1087 PF06465.13 NODE_55014_length_315_cov_22.625000_g47080_i0reverse_frame_1 - 0.11 12.6 2.3 0.17 11.9 2.3 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) DUF485 PF04341.12 NODE_55011_length_315_cov_46.482143_g47077_i0forward_frame_1 - 0.021 14.7 1.6 0.032 14.2 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF485 Phospholamban PF04272.14 NODE_55009_length_315_cov_48.250000_g47075_i0reverse_frame_1 - 0.087 12.3 3.6 0.14 11.7 3.6 1.3 1 0 0 1 1 1 0 Phospholamban zf-C2HE PF16278.5 NODE_55007_length_315_cov_53.042857_g47073_i0forward_frame_1 - 3.7e-09 36.9 1.4 5.9e-09 36.3 1.4 1.3 1 0 0 1 1 1 1 C2HE / C2H2 / C2HC zinc-binding finger Pox_A_type_inc PF04508.12 NODE_55007_length_315_cov_53.042857_g47073_i0forward_frame_1 - 0.14 12.1 0.7 1.9 8.5 0.0 2.4 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat DUF2457 PF10446.9 NODE_55005_length_315_cov_56.214286_g47071_i0forward_frame_1 - 3 6.9 7.6 3.4 6.7 7.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) MgtE PF01769.16 NODE_55002_length_315_cov_61.610714_g47068_i0forward_frame_1 - 0.048 14.0 1.8 0.055 13.8 1.8 1.1 1 0 0 1 1 1 0 Divalent cation transporter S_2TMBeta PF18153.1 NODE_54982_length_315_cov_122.696429_g47048_i0reverse_frame_1 - 0.12 12.1 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain SBD_N PF07005.11 NODE_54975_length_315_cov_218.689286_g47041_i0reverse_frame_1 - 2 8.1 6.0 0.71 9.6 3.6 1.4 1 1 0 1 1 1 0 Sugar-binding N-terminal domain PgaD PF13994.6 NODE_54972_length_315_cov_1813.864286_g47039_i0reverse_frame_1 - 1.7 8.7 4.4 2.2 8.3 4.4 1.2 1 0 0 1 1 1 0 PgaD-like protein Sigma_reg_N PF13800.6 NODE_54972_length_315_cov_1813.864286_g47039_i0reverse_frame_1 - 4 7.8 6.2 1 9.7 3.0 1.6 1 1 1 2 2 2 0 Sigma factor regulator N-terminal GTP_cyclohydro2 PF00925.20 NODE_54971_length_315_cov_2752.282143_g47038_i0reverse_frame_1 - 0.011 15.4 7.6 0.23 11.0 0.7 2.1 1 1 1 2 2 2 0 GTP cyclohydrolase II MSSP PF03940.13 NODE_54971_length_315_cov_2752.282143_g47038_i0reverse_frame_1 - 2.1 8.0 19.1 4.1 7.1 5.5 2.2 2 0 0 2 2 2 0 Male specific sperm protein DoxX PF07681.12 NODE_54971_length_315_cov_2752.282143_g47038_i0forward_frame_1 - 0.0097 16.5 1.3 2.9 8.5 0.4 2.1 2 0 0 2 2 2 2 DoxX T7SS_ESX_EspC PF10824.8 NODE_54971_length_315_cov_2752.282143_g47038_i0forward_frame_1 - 0.01 16.3 3.9 1.2 9.7 0.3 2.0 2 0 0 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm Cm_res_leader PF08077.11 NODE_54971_length_315_cov_2752.282143_g47038_i0forward_frame_1 - 0.54 10.5 16.6 10 6.6 0.1 5.0 5 0 0 5 5 5 0 Chloramphenicol resistance gene leader peptide DUF3482 PF11981.8 NODE_54970_length_315_cov_19794.128571_g47037_i0forward_frame_1 - 0.0075 15.7 5.6 0.0086 15.5 5.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) US6 PF17616.2 NODE_54964_length_316_cov_1.451957_g47031_i0reverse_frame_3 - 0.082 12.9 1.1 0.11 12.4 1.1 1.3 1 0 0 1 1 1 0 Viral unique short region 6 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks252.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks252.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks252.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks252.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF722 PF05263.11 NODE_54961_length_316_cov_1.565836_g47028_i0forward_frame_2 - 0.049 13.8 1.0 0.065 13.4 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF722) Sulfatase PF00884.23 NODE_54957_length_316_cov_1.679715_g47024_i0reverse_frame_2 - 1.4e-11 44.4 0.0 1.6e-11 44.2 0.0 1.1 1 0 0 1 1 1 1 Sulfatase LigB PF02900.18 NODE_54957_length_316_cov_1.679715_g47024_i0forward_frame_2 - 0.062 12.4 0.0 0.064 12.3 0.0 1.2 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase DUF5396 PF17374.2 NODE_54956_length_316_cov_1.693950_g47023_i0reverse_frame_2 - 0.046 11.6 0.0 0.05 11.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5396) Glyco_transf_22 PF03901.17 NODE_54956_length_316_cov_1.693950_g47023_i0forward_frame_2 - 0.00051 19.4 1.2 0.00057 19.2 1.2 1.1 1 0 0 1 1 1 1 Alg9-like mannosyltransferase family BclA_C PF18573.1 NODE_54956_length_316_cov_1.693950_g47023_i0forward_frame_2 - 0.047 13.6 0.0 0.079 12.9 0.0 1.3 1 0 0 1 1 1 0 BclA C-terminal domain CAAX_1 PF15895.5 NODE_54955_length_316_cov_1.711744_g47022_i0forward_frame_2 - 0.017 15.1 0.4 0.019 14.9 0.4 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 DVL PF08137.12 NODE_54949_length_316_cov_1.939502_g47016_i0reverse_frame_3 - 0.12 12.3 0.1 0.18 11.7 0.1 1.3 1 0 0 1 1 1 0 DVL family LysR_substrate PF03466.20 NODE_54949_length_316_cov_1.939502_g47016_i0forward_frame_3 - 0.025 13.9 0.0 0.034 13.5 0.0 1.2 1 0 0 1 1 1 0 LysR substrate binding domain MMS22L_C PF14911.6 NODE_54948_length_316_cov_1.964413_g47015_i0reverse_frame_2 - 0.031 13.3 2.5 0.034 13.2 2.3 1.3 1 1 0 1 1 1 0 S-phase genomic integrity recombination mediator, C-terminal DsrC PF04358.13 NODE_54948_length_316_cov_1.964413_g47015_i0reverse_frame_2 - 0.072 13.6 0.8 0.085 13.4 0.8 1.1 1 0 0 1 1 1 0 DsrC like protein tRNA-synt_2c PF01411.19 NODE_54947_length_316_cov_2.056940_g47014_i0reverse_frame_3 - 4.4e-29 101.4 0.2 4.7e-29 101.3 0.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) MtrB_PioB PF11854.8 NODE_54947_length_316_cov_2.056940_g47014_i0forward_frame_3 - 0.21 9.9 0.0 0.24 9.7 0.0 1.1 1 0 0 1 1 1 0 Putative outer membrane beta-barrel porin, MtrB/PioB LRR_8 PF13855.6 NODE_54944_length_316_cov_2.145907_g47011_i0reverse_frame_3 - 0.03 14.1 1.1 0.39 10.5 0.4 2.2 2 0 0 2 2 2 0 Leucine rich repeat LRR_4 PF12799.7 NODE_54944_length_316_cov_2.145907_g47011_i0reverse_frame_3 - 0.24 11.9 4.2 0.34 11.4 1.7 2.3 2 0 0 2 2 2 0 Leucine Rich repeats (2 copies) Nmad3 PF18754.1 NODE_54943_length_316_cov_2.209964_g47010_i0forward_frame_2 - 0.041 13.4 0.0 0.052 13.1 0.0 1.1 1 0 0 1 1 1 0 Nucleotide modification associated domain 3 Peptidase_S68 PF10461.9 NODE_54939_length_316_cov_2.441281_g47006_i0reverse_frame_2 - 0.27 11.5 7.0 3.3 8.0 0.3 2.7 3 0 0 3 3 3 0 Peptidase S68 DUF1053 PF06327.14 NODE_54938_length_316_cov_2.469751_g47005_i0forward_frame_2 - 0.038 14.5 0.9 0.051 14.1 0.4 1.5 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) PTS_EIIB PF00367.20 NODE_54935_length_316_cov_2.572954_g47002_i0reverse_frame_2 - 2.9 7.5 6.4 15 5.2 0.1 2.4 2 0 0 2 2 2 0 phosphotransferase system, EIIB B_lectin PF01453.24 NODE_54935_length_316_cov_2.572954_g47002_i0forward_frame_3 - 0.12 12.9 1.5 0.16 12.5 1.5 1.3 1 1 0 1 1 1 0 D-mannose binding lectin Tau95_N PF17682.1 NODE_54934_length_316_cov_2.693950_g47001_i0forward_frame_2 - 0.035 14.3 0.3 0.044 14.0 0.3 1.1 1 0 0 1 1 1 0 Tau95 Triple barrel domain DUF2070 PF09843.9 NODE_54924_length_316_cov_4.081851_g46991_i0forward_frame_3 - 0.67 8.2 3.7 0.79 7.9 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) HTH_AraC PF00165.23 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 5.7e-05 23.1 0.0 0.00011 22.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_11 PF08279.12 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 0.00069 19.5 0.0 0.0077 16.2 0.0 2.1 2 0 0 2 2 2 1 HTH domain HTH_Tnp_ISL3 PF13542.6 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 0.0022 17.4 0.1 0.0032 16.8 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_18 PF12833.7 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 0.013 15.7 0.4 0.13 12.5 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Mga PF08280.11 NODE_54923_length_316_cov_4.106762_g46990_i0reverse_frame_2 - 0.13 12.3 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain GTP_EFTU PF00009.27 NODE_54922_length_316_cov_4.145907_g46989_i0reverse_frame_2 - 1e-17 64.3 0.0 1.2e-17 64.1 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_54922_length_316_cov_4.145907_g46989_i0reverse_frame_2 - 0.00019 21.5 0.0 0.00025 21.1 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 NODE_54922_length_316_cov_4.145907_g46989_i0reverse_frame_2 - 0.019 14.4 0.1 0.039 13.4 0.1 1.7 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit MerE PF05052.12 NODE_54922_length_316_cov_4.145907_g46989_i0reverse_frame_2 - 0.15 12.0 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 MerE protein TMEM239 PF15841.5 NODE_54921_length_316_cov_4.373665_g46988_i0forward_frame_2 - 0.86 9.5 4.0 0.58 10.0 3.1 1.3 1 1 0 1 1 1 0 Transmembrane protein 239 family DEC-1_N PF04625.13 NODE_54920_length_316_cov_5.516014_g46987_i0forward_frame_2 - 0.39 9.7 3.8 0.44 9.5 3.8 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region HMG_box PF00505.19 NODE_54919_length_316_cov_12.042705_g46986_i0reverse_frame_3 - 0.0098 16.3 0.0 0.015 15.7 0.0 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box TPR_1 PF00515.28 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 8.3e-07 28.6 0.1 2.2e-05 24.1 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 1.8e-06 27.6 0.0 9.9e-05 22.2 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 1.1e-05 25.1 0.0 0.015 15.0 0.0 2.3 1 1 1 2 2 2 2 TPR repeat TPR_9 PF13371.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 5.8e-05 23.2 0.0 7.6e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat NARP1 PF12569.8 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.00021 20.3 0.4 0.00021 20.3 0.4 1.1 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 TPR_15 PF13429.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.00054 19.3 0.0 0.00078 18.7 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.0011 19.0 2.3 0.0019 18.3 0.0 2.3 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.018 15.5 0.0 0.029 14.9 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat Spore_III_AB PF09548.10 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.021 15.0 0.3 0.042 14.0 0.1 1.5 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) TPR_14 PF13428.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.032 15.0 0.0 3.4 8.7 0.0 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat zf-SAP30 PF13866.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.036 14.2 0.1 0.062 13.4 0.1 1.5 1 0 0 1 1 1 0 SAP30 zinc-finger TPR_16 PF13432.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.046 14.4 0.0 0.075 13.7 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.065 13.6 0.0 1.8 9.1 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_54918_length_316_cov_23.217082_g46985_i0reverse_frame_2 - 0.086 13.5 0.0 25 5.8 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat STAC2_u1 PF16664.5 NODE_54914_length_316_cov_50.633452_g46981_i0forward_frame_2 - 2.8 8.4 10.3 3.8 8.0 10.3 1.2 1 0 0 1 1 1 0 Unstructured on SH3 and cysteine-rich domain-containing protein 2 RNA_polI_A34 PF08208.11 NODE_54914_length_316_cov_50.633452_g46981_i0forward_frame_2 - 3.3 7.7 25.9 4.1 7.4 25.9 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Nucleo_P87 PF07267.11 NODE_54914_length_316_cov_50.633452_g46981_i0forward_frame_2 - 5.7 5.7 10.6 5.8 5.6 10.6 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Lipase_GDSL_3 PF14606.6 NODE_54912_length_316_cov_54.451957_g46979_i0forward_frame_3 - 0.14 12.2 0.1 0.63 10.1 0.1 1.8 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family Borrelia_rep PF03183.13 NODE_54912_length_316_cov_54.451957_g46979_i0forward_frame_2 - 0.47 10.5 4.7 1.2 9.2 0.1 3.4 3 0 0 3 3 3 0 Borrelia repeat protein TTL PF03133.15 NODE_54906_length_316_cov_66.800712_g46973_i0forward_frame_3 - 3.5e-10 39.5 0.0 4.1e-10 39.3 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_54906_length_316_cov_66.800712_g46973_i0forward_frame_3 - 0.035 13.4 0.0 0.036 13.3 0.0 1.2 1 0 0 1 1 1 0 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_54906_length_316_cov_66.800712_g46973_i0forward_frame_3 - 0.045 13.0 0.0 0.058 12.6 0.0 1.1 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp E6 PF00518.17 NODE_54904_length_316_cov_69.711744_g46971_i0forward_frame_2 - 0.042 14.3 0.4 0.042 14.3 0.4 1.6 2 0 0 2 2 2 0 Early Protein (E6) Integrase_H2C2 PF17921.1 NODE_54903_length_316_cov_71.444840_g46970_i0reverse_frame_2 - 0.27 11.4 0.2 0.27 11.4 0.2 1.7 2 0 0 2 2 2 0 Integrase zinc binding domain Sec62 PF03839.16 NODE_54900_length_316_cov_74.088968_g46967_i0reverse_frame_2 - 5e-10 39.3 4.8 5e-10 39.3 4.8 1.6 2 0 0 2 2 2 1 Translocation protein Sec62 DDE_Tnp_1_4 PF13701.6 NODE_54900_length_316_cov_74.088968_g46967_i0reverse_frame_2 - 0.054 11.8 0.0 0.065 11.5 0.0 1.0 1 0 0 1 1 1 0 Transposase DDE domain group 1 RFC1 PF08519.12 NODE_54899_length_316_cov_74.195730_g46966_i0forward_frame_3 - 0.12 12.6 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Replication factor RFC1 C terminal domain UBX PF00789.20 NODE_54899_length_316_cov_74.195730_g46966_i0forward_frame_2 - 2.7e-17 62.7 0.0 3.3e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 UBX domain UCR_hinge PF02320.16 NODE_54899_length_316_cov_74.195730_g46966_i0forward_frame_2 - 0.0023 18.1 0.1 0.0032 17.6 0.1 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein Granulin PF00396.18 NODE_54897_length_316_cov_79.402135_g46964_i0reverse_frame_3 - 0.07 13.5 1.9 0.09 13.1 1.0 1.6 2 0 0 2 2 2 0 Granulin IRK_N PF08466.10 NODE_54896_length_316_cov_80.871886_g46963_i0reverse_frame_2 - 0.1 12.8 0.2 0.29 11.3 0.1 1.9 2 0 0 2 2 2 0 Inward rectifier potassium channel N-terminal NRho PF16733.5 NODE_54894_length_316_cov_88.448399_g46961_i0reverse_frame_3 - 0.055 13.5 0.1 0.46 10.6 0.1 2.0 2 0 0 2 2 2 0 Rhomboid N-terminal domain CENP-F_leu_zip PF10473.9 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.00058 19.9 15.4 0.001 19.1 15.3 1.4 1 1 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 MctB PF11382.8 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.0052 16.5 3.6 0.006 16.3 3.6 1.0 1 0 0 1 1 1 1 Copper transport outer membrane protein, MctB BLOC1_2 PF10046.9 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.021 15.1 3.9 0.027 14.8 3.4 1.6 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.029 14.4 4.4 0.038 14.0 4.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) KxDL PF10241.9 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.036 14.4 4.2 0.04 14.2 0.5 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein FTA4 PF13093.6 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.039 13.8 5.0 0.049 13.5 5.0 1.2 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 NPV_P10 PF05531.12 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.05 14.1 1.2 0.34 11.4 0.8 2.1 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein RPW8 PF05659.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.062 13.0 3.3 0.088 12.5 3.3 1.2 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 HrpB2 PF09487.10 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.081 13.4 0.7 0.12 12.8 0.7 1.3 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB2) tRNA-Thr_ED PF08915.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.11 12.6 3.8 0.15 12.1 3.8 1.3 1 0 0 1 1 1 0 Archaea-specific editing domain of threonyl-tRNA synthetase DUF948 PF06103.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.19 12.0 1.4 0.38 11.0 1.1 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) PCRF PF03462.18 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.43 10.4 8.2 0.49 10.2 8.2 1.1 1 0 0 1 1 1 0 PCRF domain DUF16 PF01519.16 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.45 11.0 7.2 1 9.9 7.2 1.6 1 1 0 1 1 1 0 Protein of unknown function DUF16 Csm1_N PF18504.1 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.56 10.6 10.5 0.53 10.7 2.6 2.4 1 1 1 2 2 2 0 Csm1 N-terminal domain TMPIT PF07851.13 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.71 9.1 5.2 0.83 8.8 5.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein MIF4G_like_2 PF09090.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.74 9.2 7.1 0.82 9.1 7.1 1.1 1 0 0 1 1 1 0 MIF4G like FlaC_arch PF05377.11 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 0.84 10.1 8.7 0.57 10.6 5.0 2.6 2 2 0 2 2 2 0 Flagella accessory protein C (FlaC) V_ATPase_I PF01496.19 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 1.1 7.1 6.3 1.2 7.0 6.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family YtxH PF12732.7 NODE_54893_length_316_cov_90.491103_g46960_i0reverse_frame_3 - 2.5 8.7 5.4 9.4 6.8 5.4 2.0 1 1 0 1 1 1 0 YtxH-like protein AMP-binding PF00501.28 NODE_54892_length_316_cov_98.288256_g46959_i0forward_frame_3 - 0.12 10.9 0.1 0.13 10.8 0.1 1.1 1 0 0 1 1 1 0 AMP-binding enzyme DUF2530 PF10745.9 NODE_54890_length_316_cov_99.868327_g46957_i0reverse_frame_3 - 0.065 13.5 0.3 0.092 13.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) SPASM PF13186.6 NODE_54887_length_316_cov_102.462633_g46954_i0reverse_frame_3 - 0.039 14.5 0.1 0.053 14.0 0.1 1.2 1 0 0 1 1 1 0 Iron-sulfur cluster-binding domain CDC45 PF02724.14 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_3 - 0.026 12.8 8.1 0.03 12.6 8.1 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF3381 PF11861.8 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_3 - 0.35 10.6 19.9 0.46 10.3 19.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) VIR_N PF15912.5 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_3 - 0.74 9.4 7.2 0.86 9.2 7.2 1.1 1 0 0 1 1 1 0 Virilizer, N-terminal AAA_23 PF13476.6 NODE_54884_length_316_cov_115.814947_g46951_i0forward_frame_3 - 0.94 9.9 16.3 1.1 9.8 16.3 1.0 1 0 0 1 1 1 0 AAA domain PriCT_1 PF08708.11 NODE_54879_length_316_cov_137.241993_g46946_i0reverse_frame_3 - 0.074 12.8 0.1 2.2 8.1 0.1 2.2 1 1 1 2 2 2 0 Primase C terminal 1 (PriCT-1) DUF1244 PF06844.11 NODE_54877_length_316_cov_205.804270_g46944_i0forward_frame_2 - 0.02 15.0 0.5 0.033 14.3 0.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1244) DUF832 PF05734.11 NODE_54877_length_316_cov_205.804270_g46944_i0forward_frame_2 - 0.021 14.3 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) YqzE PF14038.6 NODE_54872_length_316_cov_68382.088968_g46940_i0forward_frame_3 - 0.92 9.6 4.5 1.4 9.0 4.5 1.3 1 0 0 1 1 1 0 YqzE-like protein Clr5 PF14420.6 NODE_54868_length_317_cov_1.198582_g46936_i0forward_frame_2 - 0.17 12.1 0.1 0.17 12.1 0.1 1.7 2 0 0 2 2 2 0 Clr5 domain DUF3985 PF13153.6 NODE_54865_length_317_cov_1.273050_g46933_i0forward_frame_3 - 0.62 10.1 6.5 0.72 9.9 4.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3985) NAF PF03822.14 NODE_54864_length_317_cov_1.273050_g46932_i0reverse_frame_2 - 1.5 9.1 8.3 1.3 9.3 0.4 2.6 3 0 0 3 3 3 0 NAF domain C1_4 PF07975.12 NODE_54864_length_317_cov_1.273050_g46932_i0forward_frame_2 - 0.0094 16.2 1.5 0.0094 16.2 1.5 1.8 2 0 0 2 2 2 1 TFIIH C1-like domain IBR PF01485.21 NODE_54864_length_317_cov_1.273050_g46932_i0forward_frame_2 - 1.2 9.4 8.0 0.12 12.6 2.8 1.9 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain Pkinase PF00069.25 NODE_54862_length_317_cov_1.382979_g46930_i0reverse_frame_2 - 4.1e-14 52.6 0.1 5.6e-14 52.2 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_54862_length_317_cov_1.382979_g46930_i0reverse_frame_2 - 3.8e-05 23.1 0.0 4.3e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 NODE_54862_length_317_cov_1.382979_g46930_i0reverse_frame_2 - 0.00052 19.7 0.1 0.00061 19.5 0.1 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pox_vIL-18BP PF05566.12 NODE_54862_length_317_cov_1.382979_g46930_i0reverse_frame_2 - 0.013 15.7 0.0 0.015 15.5 0.0 1.2 1 0 0 1 1 1 0 Orthopoxvirus interleukin 18 binding protein ENT PF03735.14 NODE_54862_length_317_cov_1.382979_g46930_i0reverse_frame_2 - 0.053 13.6 0.1 0.081 13.0 0.1 1.4 1 0 0 1 1 1 0 ENT domain DUF420 PF04238.12 NODE_54862_length_317_cov_1.382979_g46930_i0forward_frame_2 - 0.062 13.6 0.1 0.084 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF420) SNURF PF07192.11 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_3 - 0.089 12.6 0.1 0.17 11.8 0.1 1.5 1 0 0 1 1 1 0 SNURF/RPN4 protein AAA_11 PF13086.6 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_3 - 0.63 9.8 6.3 0.71 9.6 6.3 1.0 1 0 0 1 1 1 0 AAA domain Nsp1_C PF05064.13 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_2 - 7.1e-07 29.0 1.4 1.2e-06 28.3 1.4 1.3 1 0 0 1 1 1 1 Nsp1-like C-terminal region PRP1_N PF06424.12 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_2 - 0.085 13.3 7.6 0.097 13.1 7.6 1.0 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal RAG1_imp_bd PF12560.8 NODE_54857_length_317_cov_1.539007_g46925_i0reverse_frame_2 - 0.37 10.3 13.8 0.31 10.6 12.4 1.5 1 1 1 2 2 2 0 RAG1 importin binding CoA_binding_3 PF13727.6 NODE_54857_length_317_cov_1.539007_g46925_i0forward_frame_3 - 1.1 9.2 5.9 0.22 11.5 2.3 1.6 1 1 1 2 2 2 0 CoA-binding domain DUF2695 PF10905.8 NODE_54852_length_317_cov_1.684397_g46920_i0forward_frame_2 - 0.045 14.0 0.3 0.073 13.3 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2695) DUF4485 PF14846.6 NODE_54851_length_317_cov_1.695035_g46919_i0forward_frame_2 - 0.028 14.4 0.0 0.04 13.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4485) DUF3496 PF12001.8 NODE_54849_length_317_cov_1.726950_g46917_i0forward_frame_3 - 0.26 11.7 6.4 0.062 13.7 2.4 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3496) Atg14 PF10186.9 NODE_54849_length_317_cov_1.726950_g46917_i0forward_frame_3 - 2.2 7.3 9.0 2.6 7.0 9.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF521 PF04412.13 NODE_54848_length_317_cov_1.762411_g46916_i0reverse_frame_2 - 0.052 12.3 0.1 0.057 12.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF521) PAP_central PF04928.17 NODE_54847_length_317_cov_1.794326_g46915_i0reverse_frame_2 - 5.2e-17 61.7 1.4 5.9e-17 61.5 1.4 1.0 1 0 0 1 1 1 1 Poly(A) polymerase central domain Mem_trans PF03547.18 NODE_54842_length_317_cov_2.131206_g46910_i0reverse_frame_3 - 0.0067 14.9 0.4 0.008 14.6 0.4 1.0 1 0 0 1 1 1 1 Membrane transport protein MetJ PF01340.20 NODE_54841_length_317_cov_2.138298_g46909_i0reverse_frame_3 - 0.0027 17.6 0.0 0.0031 17.5 0.0 1.2 1 0 0 1 1 1 1 Met Apo-repressor, MetJ ATG16 PF08614.11 NODE_54841_length_317_cov_2.138298_g46909_i0reverse_frame_3 - 0.05 13.8 0.2 0.054 13.7 0.2 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 NODE_54841_length_317_cov_2.138298_g46909_i0reverse_frame_3 - 0.059 13.4 0.1 0.094 12.7 0.1 1.3 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 bZIP_2 PF07716.15 NODE_54841_length_317_cov_2.138298_g46909_i0reverse_frame_3 - 0.077 13.1 2.2 0.13 12.3 0.1 2.0 2 0 0 2 2 2 0 Basic region leucine zipper DUF676 PF05057.14 NODE_54838_length_317_cov_2.216312_g46906_i0forward_frame_2 - 9.2e-14 51.5 0.2 9.8e-14 51.4 0.2 1.1 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 NODE_54838_length_317_cov_2.216312_g46906_i0forward_frame_2 - 0.016 15.1 0.0 0.016 15.1 0.0 1.1 1 0 0 1 1 1 0 Palmitoyl protein thioesterase ATP_bind_2 PF03668.15 NODE_54832_length_317_cov_2.301418_g46900_i0reverse_frame_3 - 0.086 12.1 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 P-loop ATPase protein family DNA_RNApol_7kD PF03604.13 NODE_54832_length_317_cov_2.301418_g46900_i0forward_frame_2 - 0.016 14.9 2.9 0.026 14.2 0.5 2.2 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit DUF951 PF06107.11 NODE_54832_length_317_cov_2.301418_g46900_i0forward_frame_2 - 0.089 12.7 0.9 0.14 12.1 0.5 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF951) Elf1 PF05129.13 NODE_54832_length_317_cov_2.301418_g46900_i0forward_frame_2 - 0.43 10.7 5.1 0.41 10.7 4.2 1.6 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like TetR_C_12 PF16914.5 NODE_54829_length_317_cov_2.500000_g46897_i0reverse_frame_3 - 0.11 12.6 0.1 2 8.6 0.0 2.0 2 0 0 2 2 2 0 Bacterial transcriptional repressor C-terminal Phos_pyr_kin PF08543.12 NODE_54829_length_317_cov_2.500000_g46897_i0forward_frame_2 - 1.2e-13 51.1 0.0 1.2e-13 51.0 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 NODE_54829_length_317_cov_2.500000_g46897_i0forward_frame_2 - 6.2e-08 32.3 0.0 6.6e-08 32.2 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Fusion_gly PF00523.18 NODE_54827_length_317_cov_2.609929_g46895_i0reverse_frame_3 - 0.88 7.7 7.0 0.99 7.6 7.0 1.1 1 0 0 1 1 1 0 Fusion glycoprotein F0 Usher PF00577.20 NODE_54825_length_317_cov_2.904255_g46893_i0reverse_frame_2 - 8.3e-37 127.3 0.1 9.2e-37 127.1 0.1 1.0 1 0 0 1 1 1 1 Outer membrane usher protein Sas10_Utp3 PF04000.15 NODE_54823_length_317_cov_3.003546_g46891_i0reverse_frame_3 - 3.5e-12 46.8 2.1 4.5e-12 46.4 2.1 1.1 1 0 0 1 1 1 1 Sas10/Utp3/C1D family EF-hand_5 PF13202.6 NODE_54823_length_317_cov_3.003546_g46891_i0forward_frame_3 - 1 9.0 2.8 0.67 9.5 0.7 1.8 2 0 0 2 2 2 0 EF hand Bac_GDH PF05088.12 NODE_54820_length_317_cov_3.156028_g46888_i0forward_frame_2 - 0.051 11.1 0.0 0.057 10.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase ApoO PF09769.9 NODE_54819_length_317_cov_3.429078_g46887_i0forward_frame_3 - 0.033 14.2 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 Apolipoprotein O VATC PF18716.1 NODE_54814_length_317_cov_3.868794_g46882_i0reverse_frame_3 - 3 7.8 11.8 1.4 8.8 0.8 3.1 3 1 0 3 3 3 0 Vms1-associating treble clef domain PsaX PF08078.12 NODE_54814_length_317_cov_3.868794_g46882_i0reverse_frame_2 - 0.27 11.2 1.1 38 4.4 0.0 3.1 3 0 0 3 3 3 0 PsaX family DUF4564 PF15169.6 NODE_54813_length_317_cov_4.553191_g46881_i0reverse_frame_3 - 0.04 13.6 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4564) ETC_C1_NDUFA5 PF04716.14 NODE_54813_length_317_cov_4.553191_g46881_i0reverse_frame_3 - 0.094 12.5 0.3 0.21 11.4 0.1 1.6 2 0 0 2 2 2 0 ETC complex I subunit conserved region KIAA1430 PF13879.6 NODE_54809_length_317_cov_17.113475_g46878_i0forward_frame_3 - 2e-07 31.7 4.0 2.7e-07 31.3 4.0 1.2 1 0 0 1 1 1 1 KIAA1430 homologue bZIP_2 PF07716.15 NODE_54809_length_317_cov_17.113475_g46878_i0forward_frame_3 - 0.039 14.0 2.7 0.068 13.3 2.7 1.4 1 0 0 1 1 1 0 Basic region leucine zipper RAMP4 PF06624.12 NODE_54808_length_317_cov_30.709220_g46877_i0reverse_frame_3 - 0.0024 17.9 3.1 0.0024 17.9 3.1 1.7 2 0 0 2 2 2 1 Ribosome associated membrane protein RAMP4 Foamy_virus_ENV PF03408.14 NODE_54808_length_317_cov_30.709220_g46877_i0reverse_frame_3 - 0.69 7.7 2.3 0.82 7.4 2.3 1.1 1 0 0 1 1 1 0 Foamy virus envelope protein ABC2_membrane_3 PF12698.7 NODE_54808_length_317_cov_30.709220_g46877_i0reverse_frame_3 - 3.5 6.6 18.9 3.7 6.6 18.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein VPS9 PF02204.18 NODE_54806_length_317_cov_42.216312_g46875_i0forward_frame_3 - 3.2e-06 27.3 0.4 5.3e-06 26.6 0.4 1.3 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain ROQ_II PF18386.1 NODE_54806_length_317_cov_42.216312_g46875_i0forward_frame_3 - 0.021 14.6 0.2 0.2 11.5 0.0 2.1 1 1 1 2 2 2 0 Roquin II domain ACC_epsilon PF13822.6 NODE_54805_length_317_cov_43.829787_g46874_i0reverse_frame_3 - 0.037 14.7 6.3 0.037 14.7 6.3 3.1 1 1 1 2 2 2 0 Acyl-CoA carboxylase epsilon subunit Protocadherin PF08374.11 NODE_54805_length_317_cov_43.829787_g46874_i0reverse_frame_3 - 0.071 13.1 1.7 0.077 13.0 1.7 1.1 1 0 0 1 1 1 0 Protocadherin Glyco_transf_17 PF04724.13 NODE_54804_length_317_cov_46.684397_g46873_i0reverse_frame_3 - 0.041 12.9 2.0 0.57 9.1 0.5 2.0 1 1 1 2 2 2 0 Glycosyltransferase family 17 TagF_N PF09867.9 NODE_54804_length_317_cov_46.684397_g46873_i0forward_frame_3 - 0.23 11.5 0.1 0.28 11.2 0.1 1.3 1 1 0 1 1 1 0 TagF N-terminal domain, Type VI secretion system-associated Lamprin PF06403.11 NODE_54803_length_317_cov_58.578014_g46872_i0forward_frame_2 - 3.3 7.7 6.7 9.2 6.2 6.7 1.8 1 1 0 1 1 1 0 Lamprin MTHFR_C PF12225.8 NODE_54802_length_317_cov_59.265957_g46871_i0reverse_frame_2 - 0.076 12.7 5.9 0.059 13.0 1.0 2.2 1 1 1 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal Rpr2 PF04032.16 NODE_54801_length_317_cov_59.361702_g46870_i0reverse_frame_2 - 1.6e-06 28.3 10.1 1.6e-06 28.3 10.1 2.0 2 1 1 3 3 3 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain MqsA_antitoxin PF15731.5 NODE_54801_length_317_cov_59.361702_g46870_i0reverse_frame_2 - 0.014 15.5 0.9 0.023 14.8 0.9 1.3 1 1 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA RNA_POL_M_15KD PF02150.16 NODE_54801_length_317_cov_59.361702_g46870_i0reverse_frame_2 - 0.021 14.7 3.2 0.05 13.5 0.4 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Zf_RING PF16744.5 NODE_54801_length_317_cov_59.361702_g46870_i0reverse_frame_2 - 0.19 11.9 4.8 1 9.5 3.5 2.3 1 1 1 2 2 2 0 KIAA1045 RING finger zf-C2H2_3 PF13878.6 NODE_54801_length_317_cov_59.361702_g46870_i0reverse_frame_2 - 0.21 11.5 2.6 0.92 9.4 0.1 2.5 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DZR PF12773.7 NODE_54801_length_317_cov_59.361702_g46870_i0reverse_frame_2 - 1.4 9.0 8.4 5.3 7.2 2.8 2.0 1 1 1 2 2 2 0 Double zinc ribbon zf-CCHC_3 PF13917.6 NODE_54785_length_317_cov_152.340426_g46854_i0forward_frame_2 - 0.078 13.0 0.4 0.078 13.0 0.4 2.6 2 1 1 3 3 3 0 Zinc knuckle zf-CCHC PF00098.23 NODE_54785_length_317_cov_152.340426_g46854_i0forward_frame_2 - 0.086 13.0 3.9 0.3 11.2 0.3 2.6 2 0 0 2 2 2 0 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_54785_length_317_cov_152.340426_g46854_i0forward_frame_2 - 0.094 12.6 1.9 0.094 12.6 1.9 2.7 3 0 0 3 3 3 0 Zinc knuckle PHD PF00628.29 NODE_54785_length_317_cov_152.340426_g46854_i0forward_frame_2 - 0.79 9.7 14.0 0.54 10.2 7.0 2.3 1 1 1 2 2 2 0 PHD-finger NB PF04159.13 NODE_54784_length_317_cov_163.414894_g46853_i0forward_frame_2 - 0.057 13.4 3.5 4.1 7.5 1.3 2.1 1 1 0 2 2 2 0 NB glycoprotein DUF3974 PF13120.6 NODE_54784_length_317_cov_163.414894_g46853_i0forward_frame_2 - 0.12 12.5 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) FTZ PF03867.14 NODE_54783_length_317_cov_172.751773_g46852_i0reverse_frame_3 - 0.21 11.1 1.9 0.25 10.8 1.9 1.1 1 0 0 1 1 1 0 Fushi tarazu (FTZ), N-terminal region DUF2721 PF11026.8 NODE_54783_length_317_cov_172.751773_g46852_i0forward_frame_3 - 0.18 11.7 1.4 0.23 11.4 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) DUF3038 PF11237.8 NODE_54777_length_317_cov_255.269504_g46846_i0forward_frame_2 - 0.023 14.7 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) Vps36-NZF-N PF16988.5 NODE_54774_length_317_cov_294.237589_g46843_i0reverse_frame_2 - 0.098 12.1 0.8 0.12 11.7 0.0 1.5 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain ARID PF01388.21 NODE_54773_length_317_cov_378.202128_g46842_i0forward_frame_3 - 0.043 14.5 0.0 0.053 14.2 0.0 1.2 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain CxC5 PF18718.1 NODE_54772_length_317_cov_711.273050_g46841_i0reverse_frame_2 - 0.04 14.0 0.2 0.061 13.4 0.2 1.3 1 1 0 1 1 1 0 CxC5 like cysteine cluster associated with KDZ transposases Collagen PF01391.18 NODE_54768_length_317_cov_12721.968085_g46837_i0forward_frame_3 - 0.0034 17.1 11.7 0.0051 16.5 11.7 1.4 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) DUF3482 PF11981.8 NODE_54767_length_317_cov_19653.907801_g46836_i0forward_frame_3 - 0.013 14.9 6.4 0.014 14.8 6.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) MMR_HSR1_Xtn PF16897.5 NODE_54766_length_318_cov_1.045936_g46835_i0reverse_frame_2 - 0.037 14.1 0.3 0.06 13.4 0.3 1.3 1 1 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Arteri_GP4 PF02497.15 NODE_54761_length_318_cov_1.445230_g46830_i0forward_frame_2 - 0.0041 17.3 0.2 0.0045 17.1 0.2 1.1 1 0 0 1 1 1 1 Arterivirus glycoprotein DNA_gyraseB_C PF00986.21 NODE_54761_length_318_cov_1.445230_g46830_i0forward_frame_2 - 0.35 11.1 2.9 0.27 11.5 0.4 1.9 1 1 1 2 2 2 0 DNA gyrase B subunit, carboxyl terminus DUF4096 PF13340.6 NODE_54757_length_318_cov_1.777385_g46826_i0reverse_frame_3 - 0.0076 16.4 0.5 0.011 16.0 0.5 1.2 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) zf_UBZ PF18439.1 NODE_54756_length_318_cov_1.784452_g46825_i0reverse_frame_3 - 0.09 12.4 1.1 0.09 12.4 1.1 2.7 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf_C2H2_13 PF18508.1 NODE_54756_length_318_cov_1.784452_g46825_i0reverse_frame_3 - 2 8.1 7.4 8.9 6.0 0.0 3.0 3 0 0 3 3 3 0 Zinc finger domain zf-RRN7 PF11781.8 NODE_54756_length_318_cov_1.784452_g46825_i0reverse_frame_3 - 4.7 7.0 12.1 4.2 7.2 6.9 2.6 2 1 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 IBV_3A PF03617.13 NODE_54753_length_318_cov_1.908127_g46822_i0forward_frame_3 - 2.1 8.4 9.8 0.15 12.0 2.0 2.3 1 1 1 2 2 2 0 IBV 3A protein Caveolin PF01146.17 NODE_54753_length_318_cov_1.908127_g46822_i0forward_frame_2 - 0.15 12.0 0.5 0.62 10.0 0.1 1.7 1 1 1 2 2 2 0 Caveolin PRNT PF15174.6 NODE_54750_length_318_cov_1.996466_g46819_i0reverse_frame_3 - 0.26 11.3 2.1 7.4 6.7 0.0 2.6 3 0 0 3 3 3 0 Prion-related protein testis-specific NPCC PF08058.11 NODE_54750_length_318_cov_1.996466_g46819_i0forward_frame_3 - 1.9 8.6 4.2 2.4 8.2 4.2 1.1 1 0 0 1 1 1 0 Nuclear pore complex component Pox_A12 PF04651.13 NODE_54748_length_318_cov_2.077739_g46817_i0forward_frame_2 - 0.079 13.0 0.2 0.1 12.7 0.2 1.2 1 1 0 1 1 1 0 Poxvirus A12 protein Fer4_2 PF12797.7 NODE_54744_length_318_cov_2.155477_g46813_i0reverse_frame_3 - 0.12 12.5 6.7 0.12 12.5 6.7 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4 PF00037.27 NODE_54744_length_318_cov_2.155477_g46813_i0reverse_frame_3 - 0.34 10.8 8.4 0.8 9.6 8.4 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain NUT PF12881.7 NODE_54743_length_318_cov_2.183746_g46812_i0forward_frame_2 - 4.9 5.4 14.7 5 5.4 14.7 1.0 1 0 0 1 1 1 0 NUT protein P2_N PF18628.1 NODE_54740_length_318_cov_2.469965_g46809_i0reverse_frame_2 - 0.13 12.0 1.2 0.22 11.3 1.2 1.4 1 1 0 1 1 1 0 Viral coat protein P2 N-terminal domain eIF3_subunit PF08597.10 NODE_54740_length_318_cov_2.469965_g46809_i0reverse_frame_2 - 0.22 11.4 2.0 0.26 11.2 2.0 1.1 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Poxvirus_B22R_C PF13168.6 NODE_54739_length_318_cov_2.519435_g46808_i0reverse_frame_3 - 0.046 13.2 0.2 0.057 12.9 0.2 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein C-terminal RhaT PF06379.12 NODE_54737_length_318_cov_2.604240_g46806_i0reverse_frame_2 - 7.3e-42 143.8 2.9 8.4e-42 143.6 2.9 1.0 1 0 0 1 1 1 1 L-rhamnose-proton symport protein (RhaT) Glt_symporter PF03616.14 NODE_54737_length_318_cov_2.604240_g46806_i0reverse_frame_2 - 0.02 13.6 0.2 0.022 13.5 0.2 1.1 1 0 0 1 1 1 0 Sodium/glutamate symporter tRNA-synt_2c PF01411.19 NODE_54737_length_318_cov_2.604240_g46806_i0forward_frame_3 - 0.0073 14.9 0.0 0.0096 14.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DUF4632 PF15451.6 NODE_54737_length_318_cov_2.604240_g46806_i0forward_frame_2 - 0.16 12.0 4.9 1.3 9.1 0.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4632) Mrx7 PF10906.8 NODE_54736_length_318_cov_2.660777_g46805_i0reverse_frame_2 - 0.11 12.7 0.1 0.25 11.6 0.0 1.6 2 0 0 2 2 2 0 MIOREX complex component 7 TMEM154 PF15102.6 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.00022 21.1 2.1 0.00027 20.9 2.1 1.1 1 0 0 1 1 1 1 TMEM154 protein family TMEM132D_C PF15706.5 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.00037 20.2 0.0 0.00044 20.0 0.0 1.1 1 0 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Podoplanin PF05808.11 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.002 18.3 4.5 0.002 18.3 4.5 1.4 2 0 0 2 2 2 1 Podoplanin Orf78 PF06024.12 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.0021 18.3 0.1 0.0025 18.1 0.1 1.2 1 0 0 1 1 1 1 Orf78 (ac78) Shisa PF13908.6 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.0033 17.7 0.1 0.0035 17.6 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF5305 PF17231.2 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.0053 16.2 1.4 0.0059 16.0 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5305) DUF2615 PF11027.8 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.025 14.7 0.4 0.17 12.0 0.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) TMEM51 PF15345.6 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.028 14.3 0.0 0.032 14.1 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 DUF2970 PF11174.8 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.052 13.4 0.4 0.074 12.9 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2970) PIRT PF15099.6 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.065 12.8 0.1 0.079 12.5 0.1 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Hum_adeno_E3A PF05393.11 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.068 13.2 0.0 0.085 12.8 0.0 1.1 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein Glycophorin_A PF01102.18 NODE_54735_length_318_cov_2.756184_g46804_i0reverse_frame_2 - 0.078 13.2 2.4 0.13 12.5 2.3 1.4 1 1 0 1 1 1 0 Glycophorin A YesK PF14150.6 NODE_54734_length_318_cov_2.759717_g46803_i0forward_frame_3 - 0.021 15.0 1.1 0.034 14.3 1.1 1.3 1 0 0 1 1 1 0 YesK-like protein HATPase_c_2 PF13581.6 NODE_54731_length_318_cov_3.091873_g46800_i0reverse_frame_3 - 0.17 11.9 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Exo_endo_phos PF03372.23 NODE_54731_length_318_cov_3.091873_g46800_i0forward_frame_2 - 0.002 17.7 0.0 0.0023 17.5 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_54731_length_318_cov_3.091873_g46800_i0forward_frame_2 - 0.0027 17.5 0.0 0.009 15.9 0.0 1.8 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase Peptidase_C92 PF05708.12 NODE_54727_length_318_cov_3.180212_g46796_i0reverse_frame_3 - 1.2e-07 31.9 0.0 1.7e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family NLPC_P60 PF00877.19 NODE_54727_length_318_cov_3.180212_g46796_i0reverse_frame_3 - 3.6e-05 23.7 0.0 0.00014 21.9 0.0 1.7 1 1 0 1 1 1 1 NlpC/P60 family DUF3148 PF11347.8 NODE_54727_length_318_cov_3.180212_g46796_i0reverse_frame_3 - 0.14 12.0 0.0 3.2 7.6 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3148) TrkA_C PF02080.21 NODE_54726_length_318_cov_3.268551_g46795_i0reverse_frame_3 - 0.0012 18.7 0.0 0.0015 18.3 0.0 1.2 1 0 0 1 1 1 1 TrkA-C domain GPR_Gpa2_C PF11970.8 NODE_54720_length_318_cov_4.409894_g46789_i0forward_frame_2 - 0.13 12.4 0.8 0.39 10.8 0.5 1.9 1 1 1 2 2 2 0 G protein-coupled glucose receptor regulating Gpa2 C-term DUF809 PF05663.11 NODE_54720_length_318_cov_4.409894_g46789_i0forward_frame_2 - 0.64 10.2 1.9 0.94 9.6 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Mrr_cat_2 PF13156.6 NODE_54719_length_318_cov_5.636042_g46788_i0forward_frame_3 - 0.071 13.0 2.1 0.082 12.8 2.1 1.1 1 0 0 1 1 1 0 Restriction endonuclease OmpH PF03938.14 NODE_54719_length_318_cov_5.636042_g46788_i0forward_frame_2 - 0.089 13.1 6.8 0.1 12.9 6.8 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TMPIT PF07851.13 NODE_54719_length_318_cov_5.636042_g46788_i0forward_frame_2 - 0.44 9.7 4.2 0.46 9.7 4.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein Scramblase PF03803.15 NODE_54713_length_318_cov_37.487633_g46782_i0reverse_frame_3 - 0.093 12.0 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Scramblase DUF998 PF06197.13 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.0078 15.8 1.1 0.0084 15.7 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF998) Na_Ca_ex PF01699.24 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.014 15.4 0.3 0.018 15.0 0.3 1.2 1 0 0 1 1 1 0 Sodium/calcium exchanger protein DUF2781 PF10914.8 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.026 14.9 1.0 0.032 14.6 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) YoqO PF14037.6 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.047 14.2 0.1 0.06 13.9 0.1 1.1 1 0 0 1 1 1 0 YoqO-like protein TraL PF07178.11 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.063 13.7 0.2 0.076 13.5 0.2 1.2 1 0 0 1 1 1 0 TraL protein SPC25 PF06703.11 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.072 12.9 2.8 0.098 12.4 2.8 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) TPR_21 PF09976.9 NODE_54711_length_318_cov_45.310954_g46780_i0reverse_frame_2 - 0.43 10.3 1.2 0.54 9.9 1.2 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain DUF2457 PF10446.9 NODE_54710_length_318_cov_45.897527_g46779_i0reverse_frame_2 - 0.31 10.1 4.3 0.31 10.2 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Alanine_zipper PF11839.8 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 0.0053 17.1 17.3 0.11 12.9 17.3 2.1 1 1 0 1 1 1 1 Alanine-zipper, major outer membrane lipoprotein ISG65-75 PF11727.8 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 0.0076 15.5 5.9 0.0087 15.3 5.9 1.1 1 0 0 1 1 1 1 Invariant surface glycoprotein HrcA PF01628.21 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 0.13 12.2 0.5 0.14 12.0 0.5 1.0 1 0 0 1 1 1 0 HrcA protein C terminal domain PTS_IIA PF02255.16 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 0.6 10.2 7.1 0.44 10.6 4.7 1.8 1 1 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIA subunit DUF3416 PF11896.8 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 0.98 9.7 6.6 1.4 9.2 6.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3416) FUSC PF04632.12 NODE_54702_length_318_cov_62.017668_g46771_i0forward_frame_3 - 1.5 7.3 9.8 1.7 7.1 9.8 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Ribosomal_L7Ae PF01248.26 NODE_54701_length_318_cov_62.706714_g46770_i0forward_frame_2 - 0.0033 17.1 0.0 0.006 16.3 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Glyco_trans_2_3 PF13632.6 NODE_54695_length_318_cov_71.713781_g46764_i0reverse_frame_3 - 0.075 12.9 0.3 0.076 12.9 0.3 1.2 1 0 0 1 1 1 0 Glycosyl transferase family group 2 DUF5538 PF17692.1 NODE_54693_length_318_cov_71.858657_g46762_i0forward_frame_3 - 0.016 15.3 1.0 0.018 15.1 1.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5538) DUF5619 PF18505.1 NODE_54693_length_318_cov_71.858657_g46762_i0forward_frame_2 - 0.082 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5619) TRAF_BIRC3_bd PF16673.5 NODE_54692_length_318_cov_75.544170_g46761_i0reverse_frame_2 - 0.071 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain DUF951 PF06107.11 NODE_54692_length_318_cov_75.544170_g46761_i0reverse_frame_2 - 0.09 12.7 1.9 0.16 11.9 1.9 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF951) Sec62 PF03839.16 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_3 - 1 8.9 8.0 1.2 8.6 8.0 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Csm1_N PF18504.1 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 0.041 14.2 4.0 0.041 14.2 4.0 2.2 1 1 1 2 2 2 0 Csm1 N-terminal domain CP12 PF02672.15 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 0.11 13.3 3.5 0.21 12.4 1.1 2.1 1 1 1 2 2 2 0 CP12 domain HemX PF04375.14 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 0.18 11.1 6.3 0.2 10.9 6.3 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase CCD48 PF15799.5 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 0.2 9.9 3.7 0.23 9.7 3.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 DUF4164 PF13747.6 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 0.21 11.9 10.1 0.63 10.4 10.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4164) Cep57_CLD_2 PF14197.6 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 0.25 11.4 9.0 0.087 12.9 4.9 1.9 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 V_ATPase_I PF01496.19 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 0.31 8.9 8.2 0.35 8.7 8.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ACCA PF03255.14 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 0.6 10.0 6.1 0.8 9.6 6.1 1.2 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DivIC PF04977.15 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 1.9 8.3 12.2 0.94 9.3 8.1 2.1 1 1 1 2 2 2 0 Septum formation initiator UPF0242 PF06785.11 NODE_54690_length_318_cov_80.844523_g46759_i0reverse_frame_2 - 3 7.9 13.0 3.8 7.6 13.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Rad21_Rec8 PF04824.16 NODE_54687_length_318_cov_88.883392_g46756_i0reverse_frame_3 - 0.021 14.1 0.4 0.049 12.9 0.4 1.6 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein Herpes_UL6 PF01763.16 NODE_54686_length_318_cov_93.890459_g46755_i0reverse_frame_3 - 0.026 13.1 0.4 0.031 12.8 0.4 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like DUF3326 PF11805.8 NODE_54686_length_318_cov_93.890459_g46755_i0forward_frame_3 - 0.084 11.7 0.0 0.1 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3326) TcdA_TcdB_pore PF12920.7 NODE_54685_length_318_cov_106.985866_g46754_i0forward_frame_2 - 0.057 11.7 0.0 0.066 11.5 0.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF4164 PF13747.6 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.0027 17.9 4.8 0.0027 17.9 4.8 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) CENP-F_leu_zip PF10473.9 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.014 15.4 9.6 0.23 11.5 9.2 2.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ApoO PF09769.9 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.036 14.0 0.6 0.047 13.6 0.6 1.1 1 0 0 1 1 1 0 Apolipoprotein O JAKMIP_CC3 PF16034.5 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.12 12.4 7.9 0.14 12.1 7.9 1.1 1 0 0 1 1 1 0 JAKMIP CC3 domain Atg14 PF10186.9 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 0.84 8.7 8.1 1 8.4 8.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2968 PF11180.8 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 1.6 8.4 8.3 2.7 7.6 5.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) DivIC PF04977.15 NODE_54682_length_318_cov_111.770318_g46751_i0reverse_frame_3 - 2.4 8.0 8.3 13 5.7 6.2 2.5 1 1 2 3 3 3 0 Septum formation initiator Gin PF10764.9 NODE_54681_length_318_cov_127.250883_g46750_i0reverse_frame_2 - 0.0075 16.2 1.3 0.25 11.4 0.2 2.4 2 0 0 2 2 2 2 Inhibitor of sigma-G Gin Cytochrome_CBB3 PF13442.6 NODE_54681_length_318_cov_127.250883_g46750_i0reverse_frame_2 - 0.054 13.8 0.2 0.088 13.1 0.2 1.4 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III MORN PF02493.20 NODE_54681_length_318_cov_127.250883_g46750_i0forward_frame_2 - 2.2e-06 27.2 1.1 2.2e-06 27.2 1.1 3.6 4 0 0 4 4 4 2 MORN repeat Rep_1 PF01446.17 NODE_54679_length_318_cov_136.484099_g46748_i0reverse_frame_2 - 0.029 13.8 1.5 0.035 13.6 1.5 1.1 1 0 0 1 1 1 0 Replication protein Zn_Tnp_IS91 PF14319.6 NODE_54679_length_318_cov_136.484099_g46748_i0reverse_frame_2 - 0.068 13.2 1.4 0.11 12.5 1.1 1.6 2 0 0 2 2 2 0 Transposase zinc-binding domain Carbam_trans_C PF16861.5 NODE_54678_length_318_cov_142.141343_g46747_i0reverse_frame_2 - 3.4e-16 59.3 0.0 4.4e-16 58.9 0.0 1.1 1 0 0 1 1 1 1 Carbamoyltransferase C-terminus Sua5_yciO_yrdC PF01300.18 NODE_54678_length_318_cov_142.141343_g46747_i0reverse_frame_2 - 0.11 12.0 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Telomere recombination DUF123 PF01986.16 NODE_54674_length_318_cov_198.681979_g46743_i0reverse_frame_3 - 0.14 12.7 0.0 0.17 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF123 DRMBL PF07522.14 NODE_54674_length_318_cov_198.681979_g46743_i0forward_frame_3 - 0.0058 16.8 0.1 0.0068 16.6 0.1 1.1 1 0 0 1 1 1 1 DNA repair metallo-beta-lactamase Oxysterol_BP PF01237.18 NODE_54674_length_318_cov_198.681979_g46743_i0forward_frame_3 - 0.071 11.9 0.0 0.081 11.7 0.0 1.0 1 0 0 1 1 1 0 Oxysterol-binding protein CIA30 PF08547.12 ORF99533 - 0.12 12.4 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) Defensin_propep PF00879.18 ORF99473 - 0.78 10.1 0.1 0.78 10.1 0.1 2.3 1 1 1 2 2 2 0 Defensin propeptide CsgA PF17334.2 ORF98410 - 0.0048 17.6 3.7 0.044 14.5 3.3 2.1 1 1 0 1 1 1 1 Minor curli fiber component A # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks253.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks253.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks253.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks253.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:11:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CxC2 PF18803.1 ORF95158 - 0.96 9.6 7.7 1.2 9.3 7.7 1.3 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases Ring_hydroxyl_A PF00848.19 ORF94588 - 3.5e-09 36.9 0.0 4.1e-09 36.7 0.0 1.0 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) zf-NPL4 PF05020.15 ORF94542 - 0.095 12.8 1.2 0.12 12.5 1.2 1.2 1 0 0 1 1 1 0 NPL4 family, putative zinc binding region DUF3020 PF11223.8 ORF94542 - 0.23 12.0 3.5 5.8 7.5 1.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3020) LCE PF14672.6 ORF94164 - 3.2 8.4 8.2 0.39 11.4 2.3 2.2 1 1 1 2 2 2 0 Late cornified envelope Strep_his_triad PF04270.13 ORF93879 - 0.17 11.9 0.1 0.17 11.9 0.1 1.5 2 0 0 2 2 2 0 Streptococcal histidine triad protein Sp38 PF07354.12 ORF93212 - 0.034 13.6 0.9 0.047 13.1 0.8 1.3 1 1 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) Ion_trans PF00520.31 ORF93162 - 1.9e-08 33.8 1.3 2.1e-08 33.7 1.3 1.0 1 0 0 1 1 1 1 Ion transport protein CIA30 PF08547.12 ORF92970 - 0.12 12.4 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) DUF1087 PF06465.13 ORF92882 - 0.021 14.8 0.4 0.041 13.9 0.2 1.6 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1087) DBB PF14545.6 ORF92603 - 0.063 13.2 0.0 0.074 13.0 0.0 1.2 1 0 0 1 1 1 0 Dof, BCAP, and BANK (DBB) motif, DUF3277 PF11681.8 ORF92454 - 0.14 12.1 0.0 1.4 8.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3277) Alpha_TIF PF02232.15 ORF91911 - 0.13 11.3 0.1 0.16 11.0 0.1 1.1 1 0 0 1 1 1 0 Alpha trans-inducing protein (Alpha-TIF) Pribosyltran_N PF13793.6 ORF89751 - 0.031 14.2 0.2 0.042 13.8 0.2 1.2 1 0 0 1 1 1 0 N-terminal domain of ribose phosphate pyrophosphokinase DUF3314 PF11771.8 ORF89662 - 0.056 13.6 0.3 0.074 13.2 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3314) TERF2_RBM PF16772.5 ORF89662 - 0.13 11.7 0.0 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 Telomeric repeat-binding factor 2 Rap1-binding motif Nop PF01798.18 ORF89440 - 0.096 12.1 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 snoRNA binding domain, fibrillarin DUF2367 PF10164.9 ORF89391 - 0.042 14.4 0.2 0.057 13.9 0.2 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) Fumarate_red_D PF02313.17 ORF87212 - 0.084 13.0 2.5 0.13 12.4 2.4 1.4 1 1 0 1 1 1 0 Fumarate reductase subunit D Herpes_capsid PF06112.11 ORF86946 - 0.031 14.3 0.9 0.038 14.1 0.9 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF3487 PF11990.8 ORF86287 - 0.078 12.9 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DUF3069 PF11269.8 ORF86287 - 0.079 13.2 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3069) Bac_DNA_binding PF00216.21 ORF85825 - 7.3e-13 48.5 2.3 8.8e-13 48.3 2.3 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein HTH_IclR PF09339.10 ORF85825 - 0.059 13.2 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Prok-RING_2 PF14445.6 ORF85724 - 0.44 10.8 6.2 6.2 7.1 0.5 2.5 1 1 1 2 2 2 0 Prokaryotic RING finger family 2 TRP PF06011.12 ORF85045 - 0.06 12.1 1.7 0.07 11.8 1.7 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF3314 PF11771.8 ORF8502 - 0.056 13.6 0.3 0.074 13.2 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3314) TERF2_RBM PF16772.5 ORF8502 - 0.13 11.7 0.0 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 Telomeric repeat-binding factor 2 Rap1-binding motif Tho2 PF11262.8 ORF84506 - 0.0098 15.1 3.9 0.012 14.8 3.9 1.1 1 0 0 1 1 1 1 Transcription factor/nuclear export subunit protein 2 DUF4455 PF14643.6 ORF84506 - 0.015 13.9 5.6 0.019 13.7 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4455) HAUS6_N PF14661.6 ORF84506 - 0.064 12.8 2.6 0.076 12.6 2.6 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF641 PF04859.12 ORF84506 - 0.1 13.0 4.1 0.13 12.6 4.1 1.4 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF4407 PF14362.6 ORF84506 - 0.12 11.8 1.0 0.12 11.8 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FAM76 PF16046.5 ORF84506 - 0.12 11.7 5.8 0.13 11.6 5.8 1.0 1 0 0 1 1 1 0 FAM76 protein DUF2205 PF10224.9 ORF84506 - 0.16 12.0 5.5 0.075 13.0 3.4 1.7 2 0 0 2 2 2 0 Short coiled-coil protein DUF2207 PF09972.9 ORF84506 - 0.47 9.2 5.3 0.49 9.1 5.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DPPIV_rep PF18811.1 ORF83804 - 0.22 11.5 1.8 0.56 10.2 0.8 2.1 2 0 0 2 2 2 0 Dipeptidyl peptidase IV (DPP IV) low complexity region SgrT PF15894.5 ORF8350 - 0.12 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT GramPos_pilinBB PF16569.5 ORF83198 - 0.0049 17.7 0.5 0.0085 16.9 0.3 1.5 1 1 1 2 2 2 1 Gram-positive pilin backbone subunit 2, Cna-B-like domain Fumarate_red_D PF02313.17 ORF82851 - 0.084 13.0 2.5 0.13 12.4 2.4 1.4 1 1 0 1 1 1 0 Fumarate reductase subunit D Ser_hydrolase PF06821.13 ORF81729 - 0.024 14.5 0.0 0.034 14.0 0.0 1.1 1 0 0 1 1 1 0 Serine hydrolase MBA1 PF07961.11 ORF80083 - 0.072 12.1 0.0 0.091 11.8 0.0 1.1 1 0 0 1 1 1 0 MBA1-like protein DUF4820 PF16091.5 ORF7951 - 0.55 9.6 4.0 0.61 9.4 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) DUF4427 PF14468.6 ORF79095 - 0.067 13.3 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4427) Smim3 PF17307.2 ORF78764 - 0.83 9.2 5.6 0.2 11.2 1.1 2.2 1 1 1 2 2 2 0 Small integral membrane protein 3 FixQ PF05545.11 ORF77912 - 0.07 13.1 1.7 0.12 12.4 0.2 2.1 2 1 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ PBP_sp32 PF07222.12 ORF77674 - 0.13 11.7 0.5 0.15 11.5 0.5 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 DUF3489 PF11994.8 ORF76731 - 0.13 12.3 0.4 0.13 12.3 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3489) PUB PF09409.10 ORF76216 - 0.00011 22.1 0.1 0.00018 21.4 0.1 1.4 1 1 0 1 1 1 1 PUB domain RNase_Zc3h12a_2 PF14626.6 ORF76057 - 0.065 13.4 0.0 0.07 13.4 0.0 1.2 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain RET_CLD4 PF17813.1 ORF75860 - 0.1 12.9 0.1 0.16 12.3 0.1 1.5 1 1 0 1 1 1 0 RET Cadherin like domain 4 Pkinase PF00069.25 ORF75742 - 1e-18 67.7 1.2 1.1e-18 67.6 1.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF75742 - 4.8e-12 45.7 0.7 5.6e-12 45.5 0.7 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Nop PF01798.18 ORF7523 - 0.096 12.1 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 snoRNA binding domain, fibrillarin ComS PF17584.2 ORF75124 - 0.021 14.3 0.2 0.021 14.3 0.2 1.6 2 0 0 2 2 2 0 Bacillus competence protein S Bax1-I PF01027.20 ORF75124 - 0.024 14.5 2.6 0.028 14.2 2.6 1.1 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 WD40 PF00400.32 ORF74140 - 4e-12 46.5 6.0 0.00019 22.2 0.2 3.1 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF74140 - 0.0024 18.1 0.0 0.0045 17.2 0.0 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain PQQ PF01011.21 ORF74140 - 0.0062 16.4 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 PQQ enzyme repeat eIF2A PF08662.11 ORF74140 - 0.092 12.6 0.0 0.14 12.0 0.0 1.4 1 1 1 2 2 2 0 Eukaryotic translation initiation factor eIF2A MCCD1 PF15707.5 ORF73278 - 0.1 13.1 0.2 0.15 12.6 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial coiled-coil domain protein 1 DUSP PF06337.12 ORF72743 - 1.4e-11 44.9 1.3 1.4e-11 44.9 1.3 1.4 2 0 0 2 2 2 1 DUSP domain DUF4820 PF16091.5 ORF72398 - 0.55 9.6 4.0 0.61 9.4 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) UPF0697 PF15117.6 ORF72054 - 0.13 12.4 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0697 Peptidase_M74 PF03411.13 ORF72053 - 0.13 11.8 0.1 0.13 11.8 0.1 1.0 1 0 0 1 1 1 0 Penicillin-insensitive murein endopeptidase E1-E2_ATPase PF00122.20 ORF69394 - 0.097 12.2 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 E1-E2 ATPase DUF2512 PF10710.9 ORF69394 - 0.17 11.5 4.0 0.27 10.9 4.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2512) CBFD_NFYB_HMF PF00808.23 ORF69060 - 6.5e-18 64.8 1.8 8.4e-18 64.4 1.8 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF69060 - 4.5e-05 23.8 0.2 7.2e-05 23.2 0.2 1.3 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-18kDa PF02269.16 ORF69060 - 0.02 14.9 0.0 0.023 14.7 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit TFIID_20kDa PF03847.13 ORF69060 - 0.026 15.0 0.1 0.081 13.4 0.1 1.7 2 0 0 2 2 2 0 Transcription initiation factor TFIID subunit A Bromo_TP PF07524.13 ORF69060 - 0.029 14.4 0.0 0.045 13.8 0.0 1.3 1 0 0 1 1 1 0 Bromodomain associated CENP-T_C PF15511.6 ORF69060 - 0.039 14.1 0.0 0.044 13.9 0.0 1.2 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold DUF3357 PF11837.8 ORF68566 - 4.8 7.7 6.5 0.86 10.1 2.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3357) COX6C PF02937.15 ORF68566 - 6.3 7.0 5.5 27 5.0 3.1 2.2 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VIc Amidase_5 PF05382.13 ORF67441 - 0.014 15.3 0.2 0.02 14.8 0.2 1.3 1 0 0 1 1 1 0 Bacteriophage peptidoglycan hydrolase DUF2865 PF11064.8 ORF67441 - 0.095 13.1 0.1 0.13 12.7 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2865) DnaJ PF00226.31 ORF67131 - 1.1e-13 51.1 0.3 1.4e-13 50.7 0.3 1.1 1 0 0 1 1 1 1 DnaJ domain SepSecS PF05889.13 ORF66680 - 0.068 11.9 0.5 0.076 11.7 0.5 1.0 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS DUF2189 PF09955.9 ORF66403 - 0.1 12.9 0.4 0.17 12.1 0.4 1.3 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2189) IAT_beta PF11924.8 ORF66286 - 0.014 14.8 0.2 0.016 14.6 0.2 1.0 1 0 0 1 1 1 0 Inverse autotransporter, beta-domain DUF2391 PF09622.10 ORF64881 - 0.063 12.6 0.3 0.08 12.3 0.3 1.1 1 0 0 1 1 1 0 Putative integral membrane protein (DUF2391) Helicase_C PF00271.31 ORF64881 - 0.092 13.1 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Helicase conserved C-terminal domain Bac_DNA_binding PF00216.21 ORF64406 - 7.3e-13 48.5 2.3 8.8e-13 48.3 2.3 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein HTH_IclR PF09339.10 ORF64406 - 0.059 13.2 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Fumarate_red_D PF02313.17 ORF63792 - 0.084 13.0 2.5 0.13 12.4 2.4 1.4 1 1 0 1 1 1 0 Fumarate reductase subunit D Cdc6_C PF09079.11 ORF63517 - 0.072 13.1 0.1 0.096 12.7 0.1 1.3 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain CBM65_1 PF18259.1 ORF63517 - 0.12 12.6 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Carbohydrate binding module 65 domain 1 Conotoxin_I2 PF17557.2 ORF63343 - 0.019 15.0 2.6 0.019 15.0 2.6 2.0 2 0 0 2 2 2 0 I2-superfamily conotoxins GCK PF07802.11 ORF63287 - 0.016 15.6 1.2 0.026 14.9 1.2 1.4 1 0 0 1 1 1 0 GCK domain Castor1_N PF18700.1 ORF61799 - 0.071 13.0 0.7 0.67 9.8 0.3 2.2 2 0 0 2 2 2 0 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Cytochrome_CBB3 PF13442.6 ORF61124 - 0.028 14.7 2.4 0.028 14.7 1.6 1.7 1 1 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF61124 - 0.17 13.1 0.4 0.17 13.1 0.4 1.6 1 1 0 1 1 1 0 Cytochrome c Thioredoxin PF00085.20 ORF60685 - 6e-13 48.7 0.3 6.8e-13 48.5 0.3 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 ORF60685 - 5.7e-05 23.4 0.8 0.0011 19.2 0.1 2.3 1 1 1 2 2 2 1 Thioredoxin-like DIM1 PF02966.16 ORF60685 - 0.006 16.4 0.1 0.006 16.4 0.1 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_2 PF13098.6 ORF60685 - 0.025 15.0 0.2 0.071 13.6 0.2 1.7 1 1 0 1 1 1 0 Thioredoxin-like domain Phosducin PF02114.16 ORF60685 - 0.027 13.4 0.0 0.03 13.3 0.0 1.0 1 0 0 1 1 1 0 Phosducin AhpC-TSA PF00578.21 ORF60685 - 0.053 13.5 0.1 0.092 12.7 0.0 1.4 1 1 0 1 1 1 0 AhpC/TSA family Thioredoxin_3 PF13192.6 ORF60685 - 0.066 13.3 0.1 0.091 12.8 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin domain ecTbetaR2 PF08917.10 ORF59646 - 0.013 15.4 7.3 0.11 12.4 0.3 2.0 2 0 0 2 2 2 0 Transforming growth factor beta receptor 2 ectodomain AIMP2_LysRS_bd PF16780.5 ORF59612 - 0.054 13.2 0.6 0.11 12.2 0.6 1.6 1 0 0 1 1 1 0 AIMP2 lysyl-tRNA synthetase binding domain DUF508 PF04370.12 ORF58970 - 0.012 15.3 0.0 0.017 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF508) Fumarate_red_D PF02313.17 ORF58346 - 0.084 13.0 2.5 0.13 12.4 2.4 1.4 1 1 0 1 1 1 0 Fumarate reductase subunit D CIA30 PF08547.12 ORF57094 - 0.12 12.4 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) DUF4821 PF16092.5 ORF56704 - 0.14 11.8 0.1 0.21 11.2 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4821) DLEU7 PF15760.5 ORF55019 - 0.14 11.6 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Leukemia-associated protein 7 Cnd3 PF12719.7 ORF54182 - 0.043 13.0 0.0 0.044 13.0 0.0 1.1 1 0 0 1 1 1 0 Nuclear condensing complex subunits, C-term domain Amidase_3 PF01520.18 ORF53417 - 0.24 11.5 0.0 0.29 11.3 0.0 1.0 1 0 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase Selenoprotein_S PF06936.11 ORF52799 - 0.12 12.1 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) DUF5403 PF17395.2 ORF5279 - 0.14 12.4 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5403) E1_4HB PF16191.5 ORF51708 - 0.086 13.1 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle Kringle PF00051.18 ORF50867 - 0.89 9.9 6.4 1.7 9.0 6.4 1.4 1 0 0 1 1 1 0 Kringle domain Phage_SSB PF16773.5 ORF50619 - 0.026 14.6 0.0 0.028 14.5 0.0 1.2 1 0 0 1 1 1 0 Lactococcus phage single-stranded DNA binding protein Ada_Zn_binding PF02805.16 ORF50619 - 0.056 13.5 0.3 0.084 12.9 0.3 1.2 1 0 0 1 1 1 0 Metal binding domain of Ada Tankyrase_bdg_C PF15327.6 ORF50516 - 0.056 13.9 0.1 0.064 13.7 0.1 1.1 1 0 0 1 1 1 0 Tankyrase binding protein C terminal domain YrhK PF14145.6 ORF49178 - 5.2 7.0 15.7 9.4 6.2 9.9 2.4 2 0 0 2 2 2 0 YrhK-like protein LCE PF14672.6 ORF47438 - 3.2 8.4 8.2 0.39 11.4 2.3 2.2 1 1 1 2 2 2 0 Late cornified envelope DUF2149 PF09919.9 ORF47132 - 9.6 6.5 5.7 1.1 9.6 0.5 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2149) LCE PF14672.6 ORF45627 - 3.2 8.4 8.2 0.39 11.4 2.3 2.2 1 1 1 2 2 2 0 Late cornified envelope AAA_31 PF13614.6 ORF44546 - 0.11 12.4 2.5 0.11 12.4 2.5 1.1 1 0 0 1 1 1 0 AAA domain DUF5403 PF17395.2 ORF43914 - 0.15 12.4 0.1 0.22 11.9 0.1 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5403) SMC_N PF02463.19 ORF43812 - 0.02 14.4 0.1 0.023 14.1 0.1 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 ORF43812 - 0.062 13.8 0.1 0.11 13.0 0.1 1.4 1 0 0 1 1 1 0 ABC transporter Tom22 PF04281.13 ORF43504 - 0.17 11.7 0.1 0.24 11.2 0.1 1.3 1 1 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 DUF3338 PF11819.8 ORF43330 - 0.075 13.0 6.0 0.078 13.0 4.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3338) Thioredoxin PF00085.20 ORF43283 - 5.7e-32 109.8 0.2 6.6e-32 109.6 0.2 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF43283 - 3.8e-08 33.7 0.4 1.1e-06 29.1 0.4 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 ORF43283 - 6.5e-07 29.0 0.1 7.8e-07 28.7 0.1 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 ORF43283 - 1.2e-06 28.7 0.0 0.0022 18.3 0.0 2.4 1 1 1 2 2 2 2 Thioredoxin-like DIM1 PF02966.16 ORF43283 - 1.6e-06 27.9 0.3 1.8e-06 27.8 0.3 1.1 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin_9 PF14595.6 ORF43283 - 3.2e-06 27.0 0.1 3.5e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin AhpC-TSA PF00578.21 ORF43283 - 2.1e-05 24.4 0.1 0.00014 21.7 0.1 1.9 1 1 0 1 1 1 1 AhpC/TSA family DUF2847 PF11009.8 ORF43283 - 3e-05 23.9 0.0 3.9e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2847) Thioredoxin_7 PF13899.6 ORF43283 - 0.00015 21.9 0.1 0.00027 21.1 0.1 1.5 1 1 0 1 1 1 1 Thioredoxin-like HyaE PF07449.11 ORF43283 - 0.0026 17.7 0.0 0.0041 17.0 0.0 1.5 1 1 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Phosducin PF02114.16 ORF43283 - 0.0051 15.8 0.0 0.0057 15.6 0.0 1.0 1 0 0 1 1 1 1 Phosducin PCYCGC PF13798.6 ORF43283 - 0.081 12.8 0.4 0.32 10.8 0.1 2.0 1 1 0 2 2 2 0 Protein of unknown function with PCYCGC motif Thioredoxin_5 PF13743.6 ORF43283 - 0.088 12.5 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Thioredoxin Disulph_isomer PF06491.11 ORF43283 - 0.095 12.8 0.0 0.18 11.9 0.0 1.5 1 1 0 1 1 1 0 Disulphide isomerase Glutaredoxin PF00462.24 ORF43283 - 0.096 12.9 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Glutaredoxin Fumarate_red_D PF02313.17 ORF43179 - 0.084 13.0 2.5 0.13 12.4 2.4 1.4 1 1 0 1 1 1 0 Fumarate reductase subunit D Lebercilin PF15619.6 ORF42927 - 3.8e-06 26.7 10.0 4.2e-06 26.6 10.0 1.0 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Laminin_II PF06009.12 ORF42927 - 4.6e-05 23.5 4.0 5.7e-05 23.1 4.0 1.2 1 0 0 1 1 1 1 Laminin Domain II DUF4472 PF14739.6 ORF42927 - 4.9e-05 24.0 10.8 6.2e-05 23.7 10.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4472) Spc7 PF08317.11 ORF42927 - 6.5e-05 22.0 10.4 7.3e-05 21.8 10.4 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein ADIP PF11559.8 ORF42927 - 8.3e-05 22.7 9.1 0.00014 22.0 9.1 1.4 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Atg14 PF10186.9 ORF42927 - 8.4e-05 21.8 7.2 0.0001 21.5 7.2 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 EzrA PF06160.12 ORF42927 - 0.0001 20.7 10.4 0.00012 20.4 10.4 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA Fez1 PF06818.15 ORF42927 - 0.00012 22.6 8.6 0.00018 22.1 8.6 1.3 1 0 0 1 1 1 1 Fez1 DHR10 PF18595.1 ORF42927 - 0.00018 21.5 10.4 0.00024 21.1 10.4 1.3 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain ATG16 PF08614.11 ORF42927 - 0.00019 21.7 9.4 0.00022 21.5 9.4 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF948 PF06103.11 ORF42927 - 0.00045 20.4 3.1 0.00064 19.9 3.1 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Taxilin PF09728.9 ORF42927 - 0.00053 19.3 11.1 0.00076 18.7 11.1 1.3 1 1 0 1 1 1 1 Myosin-like coiled-coil protein IFT57 PF10498.9 ORF42927 - 0.00062 18.8 6.0 0.00071 18.6 6.0 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF4201 PF13870.6 ORF42927 - 0.00063 19.5 12.4 0.00079 19.2 12.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) AAA_13 PF13166.6 ORF42927 - 0.00068 18.4 8.9 0.00075 18.3 8.9 1.0 1 0 0 1 1 1 1 AAA domain Cast PF10174.9 ORF42927 - 0.00093 17.6 8.6 0.0011 17.3 8.6 1.0 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone HAP1_N PF04849.13 ORF42927 - 0.00093 18.5 10.8 0.001 18.3 10.8 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region DUF641 PF04859.12 ORF42927 - 0.00094 19.5 8.8 0.097 13.0 6.4 2.1 1 1 1 2 2 2 2 Plant protein of unknown function (DUF641) DUF724 PF05266.14 ORF42927 - 0.0013 18.5 8.5 0.0019 18.0 8.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF42927 - 0.0016 18.5 5.0 0.002 18.2 5.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF42927 - 0.0016 17.8 8.2 0.0018 17.6 8.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) BST2 PF16716.5 ORF42927 - 0.0018 18.8 7.4 0.0018 18.8 7.4 2.0 1 1 1 2 2 2 1 Bone marrow stromal antigen 2 Tropomyosin_1 PF12718.7 ORF42927 - 0.002 18.3 19.5 0.015 15.4 15.3 2.0 1 1 1 2 2 2 2 Tropomyosin like TPR_MLP1_2 PF07926.12 ORF42927 - 0.0021 18.1 13.2 0.0059 16.7 9.0 2.0 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein DUF745 PF05335.13 ORF42927 - 0.0023 17.7 3.1 0.0027 17.5 3.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF745) DUF2046 PF09755.9 ORF42927 - 0.0023 17.2 10.2 0.0027 17.0 10.2 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) DUF16 PF01519.16 ORF42927 - 0.0031 18.0 11.2 0.096 13.2 7.5 2.0 1 1 1 2 2 2 2 Protein of unknown function DUF16 DUF3584 PF12128.8 ORF42927 - 0.0035 15.0 7.3 0.004 14.8 7.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) GAS PF13851.6 ORF42927 - 0.0041 16.5 13.8 0.011 15.1 13.7 1.5 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding HOOK PF05622.12 ORF42927 - 0.0042 15.3 11.9 0.0043 15.3 11.9 1.0 1 0 0 1 1 1 1 HOOK protein Seryl_tRNA_N PF02403.22 ORF42927 - 0.0048 17.1 9.9 0.0075 16.5 9.9 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF4200 PF13863.6 ORF42927 - 0.005 17.2 15.1 0.038 14.4 15.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4200) Fib_alpha PF08702.10 ORF42927 - 0.0053 16.9 9.0 0.18 12.0 1.1 2.2 1 1 0 2 2 2 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF42927 - 0.0053 17.0 7.9 0.0073 16.6 7.5 1.5 1 1 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 CENP-F_leu_zip PF10473.9 ORF42927 - 0.0055 16.7 13.9 0.0062 16.6 13.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Csm1_N PF18504.1 ORF42927 - 0.0056 17.0 13.3 0.21 11.9 5.0 2.4 1 1 1 2 2 2 2 Csm1 N-terminal domain Tropomyosin PF00261.20 ORF42927 - 0.0059 16.0 12.5 0.0072 15.7 12.5 1.2 1 0 0 1 1 1 1 Tropomyosin CC2-LZ PF16516.5 ORF42927 - 0.009 16.4 13.5 0.12 12.7 9.9 2.1 1 1 1 2 2 2 2 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator CENP-H PF05837.12 ORF42927 - 0.012 16.1 7.0 0.015 15.7 7.0 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) KxDL PF10241.9 ORF42927 - 0.012 15.9 6.3 0.18 12.1 6.3 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein DUF812 PF05667.11 ORF42927 - 0.012 14.5 13.6 0.025 13.5 13.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF812) HMMR_N PF15905.5 ORF42927 - 0.014 14.9 15.6 0.038 13.5 15.6 1.6 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal PKcGMP_CC PF16808.5 ORF42927 - 0.015 15.1 16.5 1.3 8.9 0.0 4.0 2 1 2 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Exonuc_VII_L PF02601.15 ORF42927 - 0.016 14.8 2.8 0.018 14.6 2.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit THOC7 PF05615.13 ORF42927 - 0.016 15.4 11.9 0.42 10.9 11.9 2.0 1 1 0 1 1 1 0 Tho complex subunit 7 BRE1 PF08647.11 ORF42927 - 0.019 15.0 14.4 0.035 14.2 14.4 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase T3SSipB PF16535.5 ORF42927 - 0.022 15.2 7.0 0.038 14.5 7.0 1.4 1 1 0 1 1 1 0 Type III cell invasion protein SipB TMF_TATA_bd PF12325.8 ORF42927 - 0.023 14.9 14.3 0.51 10.6 14.3 2.3 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Prefoldin PF02996.17 ORF42927 - 0.023 14.6 13.6 0.11 12.4 2.5 2.1 1 1 0 2 2 2 0 Prefoldin subunit DivIC PF04977.15 ORF42927 - 0.024 14.4 16.5 0.15 11.9 4.6 2.5 1 1 1 2 2 2 0 Septum formation initiator Phage_GPO PF05929.11 ORF42927 - 0.027 14.1 5.4 0.038 13.6 5.4 1.3 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase TMPIT PF07851.13 ORF42927 - 0.028 13.7 7.7 0.031 13.5 7.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein HemX PF04375.14 ORF42927 - 0.029 13.7 5.4 0.034 13.4 5.4 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Golgin_A5 PF09787.9 ORF42927 - 0.03 13.8 11.2 0.034 13.6 11.2 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 LOH1CR12 PF10158.9 ORF42927 - 0.03 14.3 2.9 0.035 14.1 2.9 1.2 1 0 0 1 1 1 0 Tumour suppressor protein Occludin_ELL PF07303.13 ORF42927 - 0.031 15.0 5.8 0.084 13.6 5.9 1.8 1 1 0 1 1 1 0 Occludin homology domain Sec8_exocyst PF04048.14 ORF42927 - 0.033 14.1 6.8 0.27 11.1 1.6 2.0 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain GrpE PF01025.19 ORF42927 - 0.034 13.8 15.0 1.2 8.8 15.0 2.1 1 1 0 1 1 1 0 GrpE Prominin PF05478.11 ORF42927 - 0.039 11.9 2.8 0.041 11.9 2.8 1.0 1 0 0 1 1 1 0 Prominin DUF4407 PF14362.6 ORF42927 - 0.04 13.3 8.1 0.067 12.5 8.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FPP PF05911.11 ORF42927 - 0.041 12.1 12.4 0.048 11.9 12.4 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil FapA PF03961.13 ORF42927 - 0.042 12.4 9.6 0.049 12.2 9.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A OmpH PF03938.14 ORF42927 - 0.046 14.0 14.1 0.11 12.9 14.1 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) GldM_N PF12081.8 ORF42927 - 0.047 13.8 7.0 0.057 13.5 7.0 1.2 1 0 0 1 1 1 0 GldM N-terminal domain TMF_DNA_bd PF12329.8 ORF42927 - 0.049 13.6 18.6 0.18 11.8 14.0 2.2 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF5082 PF16888.5 ORF42927 - 0.051 13.9 10.9 1.9 8.8 6.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Phage_GP20 PF06810.11 ORF42927 - 0.051 13.4 17.4 1.2 8.9 17.4 2.0 1 1 0 1 1 1 0 Phage minor structural protein GP20 UPF0242 PF06785.11 ORF42927 - 0.052 13.7 15.2 0.083 13.0 15.2 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus E2R135 PF11570.8 ORF42927 - 0.052 13.8 5.0 0.16 12.3 5.0 1.7 1 1 0 1 1 1 0 Coiled-coil receptor-binding R-domain of colicin E2 DASH_Spc34 PF08657.10 ORF42927 - 0.058 13.2 10.0 0.18 11.6 10.0 1.7 1 1 0 1 1 1 0 DASH complex subunit Spc34 YtxH PF12732.7 ORF42927 - 0.066 13.8 4.9 0.19 12.3 4.9 1.8 1 1 0 1 1 1 0 YtxH-like protein DUF2968 PF11180.8 ORF42927 - 0.066 12.8 4.6 0.099 12.3 4.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Jnk-SapK_ap_N PF09744.9 ORF42927 - 0.066 13.4 12.6 0.093 13.0 12.6 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Spc24 PF08286.11 ORF42927 - 0.074 13.3 14.3 0.86 9.9 6.3 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Baculo_PEP_C PF04513.12 ORF42927 - 0.077 13.0 3.7 0.16 12.0 3.6 1.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Tho2 PF11262.8 ORF42927 - 0.078 12.2 6.6 0.087 12.0 6.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Sec2p PF06428.11 ORF42927 - 0.084 12.8 12.9 0.3 11.1 11.2 2.0 1 1 2 3 3 3 0 GDP/GTP exchange factor Sec2p CENP-Q PF13094.6 ORF42927 - 0.096 12.9 13.2 0.89 9.7 13.1 1.9 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit DLP_helical PF18709.1 ORF42927 - 0.097 11.9 8.3 0.21 10.8 8.2 1.6 1 1 1 2 2 2 0 Dynamin-like helical domain Hrs_helical PF12210.8 ORF42927 - 0.097 13.2 8.1 1.2 9.7 8.1 2.0 1 1 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Snapin_Pallidin PF14712.6 ORF42927 - 0.098 13.1 10.3 0.22 12.0 5.3 2.0 1 1 0 1 1 1 0 Snapin/Pallidin FlaC_arch PF05377.11 ORF42927 - 0.1 13.0 11.9 0.42 11.0 3.1 2.4 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) DUF4298 PF14131.6 ORF42927 - 0.1 12.6 9.5 0.79 9.7 0.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) TolA_bind_tri PF16331.5 ORF42927 - 0.11 12.6 10.3 0.86 9.7 10.2 2.1 1 1 0 1 1 1 0 TolA binding protein trimerisation WXG100 PF06013.12 ORF42927 - 0.11 12.7 2.5 0.66 10.2 0.4 2.1 1 1 1 2 2 2 0 Proteins of 100 residues with WXG HrpB7 PF09486.10 ORF42927 - 0.11 12.8 7.1 0.21 11.9 7.1 1.5 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) PRKG1_interact PF15898.5 ORF42927 - 0.13 13.2 9.3 0.78 10.7 3.7 2.0 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain FlxA PF14282.6 ORF42927 - 0.13 12.2 12.3 3.3 7.7 12.4 2.0 1 1 0 1 1 1 0 FlxA-like protein Lzipper-MIP1 PF14389.6 ORF42927 - 0.13 12.5 10.3 0.6 10.4 3.2 2.4 2 1 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 Cep57_MT_bd PF06657.13 ORF42927 - 0.14 12.6 9.4 0.28 11.7 8.9 1.7 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 USP8_interact PF08941.10 ORF42927 - 0.16 11.8 6.5 0.82 9.5 1.2 2.0 1 1 0 2 2 2 0 USP8 interacting Med9 PF07544.13 ORF42927 - 0.18 11.9 7.4 0.47 10.6 7.4 1.8 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 MetOD2 PF18548.1 ORF42927 - 0.18 11.9 5.9 0.87 9.7 0.5 2.2 2 0 0 2 2 2 0 Metanogen output domain 2 Lectin_N PF03954.14 ORF42927 - 0.19 11.5 7.8 0.31 10.8 2.2 2.2 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Swi5 PF07061.11 ORF42927 - 0.19 11.8 11.4 0.17 12.0 1.6 2.2 1 1 1 2 2 2 0 Swi5 HIP1_clath_bdg PF16515.5 ORF42927 - 0.19 12.3 12.6 0.35 11.5 2.4 2.1 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ZapB PF06005.12 ORF42927 - 0.2 12.1 14.8 0.47 10.9 2.4 2.1 1 1 1 2 2 2 0 Cell division protein ZapB Rho_Binding PF08912.11 ORF42927 - 0.2 12.5 16.8 0.24 12.3 6.3 2.5 1 1 1 2 2 2 0 Rho Binding V-SNARE PF05008.15 ORF42927 - 0.23 11.8 11.9 0.22 11.9 4.3 2.3 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus Sec34 PF04136.15 ORF42927 - 0.23 11.3 9.7 0.41 10.5 2.0 1.9 1 1 1 2 2 2 0 Sec34-like family LPP PF04728.13 ORF42927 - 0.25 11.8 9.3 0.42 11.0 5.1 2.3 1 1 0 2 2 2 0 Lipoprotein leucine-zipper NPV_P10 PF05531.12 ORF42927 - 0.26 11.8 11.0 0.19 12.2 6.3 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein V_ATPase_I PF01496.19 ORF42927 - 0.29 9.0 6.1 0.36 8.7 6.1 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ABC_tran_CTD PF16326.5 ORF42927 - 0.34 11.2 17.2 0.63 10.3 11.9 2.6 1 1 2 3 3 3 0 ABC transporter C-terminal domain HalX PF08663.10 ORF42927 - 0.34 11.3 11.5 0.65 10.4 6.3 2.8 1 1 2 3 3 3 0 HalX domain DUF2203 PF09969.9 ORF42927 - 0.35 11.6 5.1 0.56 10.9 5.0 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) PCRF PF03462.18 ORF42927 - 0.35 10.7 7.3 0.43 10.4 7.3 1.2 1 0 0 1 1 1 0 PCRF domain DUF4337 PF14235.6 ORF42927 - 0.35 11.0 5.9 0.44 10.6 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4446 PF14584.6 ORF42927 - 0.36 10.8 8.7 1.6 8.7 0.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF4795 PF16043.5 ORF42927 - 0.42 10.2 13.6 1.1 8.9 13.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) NYD-SP28 PF14772.6 ORF42927 - 0.43 10.7 17.1 0.62 10.1 1.3 2.7 1 1 1 2 2 2 0 Sperm tail YabA PF06156.13 ORF42927 - 0.49 11.1 10.5 7.1 7.3 10.0 2.0 1 1 0 1 1 1 0 Initiation control protein YabA SseC PF04888.12 ORF42927 - 0.54 9.8 8.9 0.095 12.3 4.9 1.6 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family LMBR1 PF04791.16 ORF42927 - 0.58 9.0 2.7 0.63 8.9 2.7 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein FliD_N PF02465.18 ORF42927 - 0.67 10.7 4.3 1.9 9.2 4.3 1.8 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus XhlA PF10779.9 ORF42927 - 0.72 10.1 12.4 0.37 11.0 1.9 2.1 1 1 2 3 3 3 0 Haemolysin XhlA DPM3 PF08285.11 ORF42927 - 0.72 10.1 7.2 5.2 7.3 1.7 2.3 1 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Hemagglutinin PF00509.18 ORF42927 - 0.74 8.2 5.2 0.9 7.9 5.2 1.3 1 0 0 1 1 1 0 Haemagglutinin DUF4140 PF13600.6 ORF42927 - 0.85 10.1 10.4 2.8 8.5 1.7 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF1515 PF07439.11 ORF42927 - 0.9 9.6 2.8 4.5 7.3 2.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) APG6_N PF17675.1 ORF42927 - 0.91 10.0 19.2 2.5 8.7 19.2 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region Ax_dynein_light PF10211.9 ORF42927 - 0.92 9.4 12.8 0.61 10.0 10.7 1.6 1 1 1 2 2 2 0 Axonemal dynein light chain Prefoldin_2 PF01920.20 ORF42927 - 0.94 9.5 16.6 2.8 8.0 6.1 2.2 1 1 1 2 2 2 0 Prefoldin subunit CASP_C PF08172.12 ORF42927 - 0.98 8.7 10.2 0.18 11.1 1.0 2.1 1 1 1 2 2 2 0 CASP C terminal FAM76 PF16046.5 ORF42927 - 1 8.7 9.0 1.9 7.7 8.7 1.5 1 1 0 1 1 1 0 FAM76 protein DUF2570 PF10828.8 ORF42927 - 1.2 9.0 7.1 0.35 10.7 2.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) DASH_Dam1 PF08653.10 ORF42927 - 1.3 8.9 3.9 3 7.7 1.0 2.6 1 1 1 2 2 2 0 DASH complex subunit Dam1 Cluap1 PF10234.9 ORF42927 - 1.3 8.4 12.6 5.3 6.4 1.8 1.7 1 1 1 2 2 2 0 Clusterin-associated protein-1 SlyX PF04102.12 ORF42927 - 1.4 9.6 11.8 6 7.6 10.2 2.4 1 1 1 2 2 2 0 SlyX Wtap PF17098.5 ORF42927 - 1.5 8.8 12.1 0.4 10.6 2.0 2.1 1 1 1 2 2 2 0 WTAP/Mum2p family CHD5 PF04420.14 ORF42927 - 1.7 8.5 5.7 0.99 9.2 2.0 1.9 1 1 1 2 2 2 0 CHD5-like protein RPW8 PF05659.11 ORF42927 - 1.7 8.3 10.0 9.9 5.9 5.7 2.6 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Mst1_SARAH PF11629.8 ORF42927 - 1.8 8.7 11.7 0.5 10.5 1.0 2.6 2 1 0 2 2 2 0 C terminal SARAH domain of Mst1 Sas10_Utp3 PF04000.15 ORF42927 - 5.7 7.6 8.6 1.9e+02 2.8 8.6 2.5 1 1 0 1 1 1 0 Sas10/Utp3/C1D family ACCA PF03255.14 ORF42927 - 8.5 6.2 9.8 30 4.5 9.8 1.9 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 7tm_6 PF02949.20 ORF40610 - 0.045 12.8 0.2 0.051 12.7 0.2 1.0 1 0 0 1 1 1 0 7tm Odorant receptor Ribosomal_L7Ae PF01248.26 ORF395 - 1.1e-22 79.6 0.1 1.2e-22 79.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family B9-C2 PF07162.11 ORF38471 - 0.0014 18.8 0.3 0.0015 18.8 0.3 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein zf-C3HC4_2 PF13923.6 ORF3641 - 0.045 13.6 0.6 0.085 12.7 0.6 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF3641 - 0.051 13.5 2.5 0.083 12.8 2.5 1.5 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) CxC1 PF18802.1 ORF3580 - 0.031 14.4 0.2 0.063 13.4 0.1 1.5 1 1 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases PBP_sp32 PF07222.12 ORF35665 - 0.13 11.7 0.5 0.15 11.5 0.5 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Epimerase PF01370.21 ORF33720 - 0.014 14.8 0.6 0.023 14.2 0.6 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Colipase-like PF15083.6 ORF32244 - 0.51 10.5 10.3 0.46 10.6 5.4 2.0 1 1 1 2 2 2 0 Colipase-like Flavi_capsid PF01003.19 ORF31460 - 0.18 11.6 0.0 0.34 10.7 0.0 1.4 1 0 0 1 1 1 0 Flavivirus capsid protein C HIP1_clath_bdg PF16515.5 ORF31201 - 0.0077 16.8 4.7 0.01 16.4 4.7 1.2 1 0 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 Golgin_A5 PF09787.9 ORF31201 - 0.0081 15.7 5.6 0.0086 15.6 5.6 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 DUF641 PF04859.12 ORF31201 - 0.0082 16.5 5.1 0.0099 16.2 4.7 1.3 1 1 0 1 1 1 1 Plant protein of unknown function (DUF641) NYD-SP28 PF14772.6 ORF31201 - 0.009 16.1 6.3 0.012 15.6 6.0 1.4 1 1 0 1 1 1 1 Sperm tail Spc7 PF08317.11 ORF31201 - 0.011 14.7 5.9 0.012 14.6 5.9 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF31201 - 0.017 15.4 3.4 0.023 14.9 3.4 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 SKA2 PF16740.5 ORF31201 - 0.019 14.8 5.0 0.037 13.8 5.0 1.5 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 OmpH PF03938.14 ORF31201 - 0.021 15.2 7.7 0.021 15.2 7.7 1.3 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Viral_P18 PF04521.13 ORF31201 - 0.051 13.4 1.4 0.074 12.8 1.4 1.2 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein DUF724 PF05266.14 ORF31201 - 0.052 13.4 5.8 0.065 13.1 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF4407 PF14362.6 ORF31201 - 0.13 11.6 2.4 0.13 11.5 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Uso1_p115_C PF04871.13 ORF31201 - 0.15 12.4 8.6 0.2 12.1 8.6 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF1664 PF07889.12 ORF31201 - 0.17 12.0 3.9 0.23 11.5 3.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) BST2 PF16716.5 ORF31201 - 0.27 11.8 8.1 0.51 10.9 7.9 1.6 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 YlqD PF11068.8 ORF31201 - 0.43 11.0 7.7 0.49 10.8 7.7 1.2 1 0 0 1 1 1 0 YlqD protein bZIP_1 PF00170.21 ORF31201 - 1.3 9.2 11.5 5 7.3 4.4 2.2 1 1 1 2 2 2 0 bZIP transcription factor TMF_DNA_bd PF12329.8 ORF31201 - 1.8 8.6 12.7 6.2 6.9 12.7 1.8 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding XhlA PF10779.9 ORF31201 - 7.2 6.9 11.2 5 7.4 6.1 2.6 2 1 1 3 3 3 0 Haemolysin XhlA Period_C PF12114.8 ORF31075 - 2.7 7.5 7.6 3.9 7.0 7.6 1.3 1 0 0 1 1 1 0 Period protein 2/3C-terminal region ATP-synt_I PF03899.15 ORF30276 - 0.03 14.7 0.1 0.04 14.3 0.1 1.2 1 0 0 1 1 1 0 ATP synthase I chain Golgin_A5 PF09787.9 ORF30189 - 0.0029 17.1 8.5 0.003 17.1 8.5 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 DDE_Tnp_1 PF01609.21 ORF30189 - 0.033 13.8 0.2 0.041 13.5 0.2 1.0 1 0 0 1 1 1 0 Transposase DDE domain ARA70 PF12489.8 ORF30189 - 0.057 13.6 3.0 0.064 13.4 3.0 1.2 1 0 0 1 1 1 0 Nuclear coactivator DUF148 PF02520.17 ORF30189 - 0.066 13.3 4.1 0.095 12.8 4.1 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF148 PhoU PF01895.19 ORF30189 - 0.11 13.0 2.5 0.34 11.4 2.5 2.0 1 1 0 1 1 1 0 PhoU domain Phage_Mu_Gam PF07352.12 ORF30189 - 0.14 12.1 7.5 1.2 9.1 0.8 2.0 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein IF-2B PF01008.17 ORF30189 - 0.27 10.4 1.8 0.3 10.3 1.8 1.1 1 0 0 1 1 1 0 Initiation factor 2 subunit family FapA PF03961.13 ORF30189 - 0.92 8.0 7.6 1 7.9 7.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF1968 PF09291.10 ORF29916 - 0.25 11.4 3.6 0.49 10.5 2.1 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF1968) Keratin_B2_2 PF13885.6 ORF29818 - 1.9 8.5 13.9 0.22 11.5 6.2 2.1 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein zinc-ribbons_6 PF07191.12 ORF2950 - 0.017 15.1 13.2 0.42 10.6 2.9 2.2 1 1 1 2 2 2 0 zinc-ribbons DZR PF12773.7 ORF2950 - 0.084 12.9 11.5 2.5 8.2 7.5 2.4 1 1 1 2 2 2 0 Double zinc ribbon Ric8 PF10165.9 ORF2950 - 0.13 11.3 0.0 0.15 11.0 0.0 1.0 1 0 0 1 1 1 0 Guanine nucleotide exchange factor synembryn PHD_4 PF16866.5 ORF2950 - 0.14 12.3 0.5 0.14 12.3 0.5 2.6 2 1 0 2 2 2 0 PHD-finger C1_1 PF00130.22 ORF2950 - 5.9 6.9 14.4 6.6 6.7 6.1 3.0 1 1 2 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) RecR PF02132.15 ORF2950 - 7.8 6.2 16.5 0.07 12.7 3.7 2.9 1 1 1 2 2 2 0 RecR protein Dynein_light PF01221.18 ORF28193 - 1.6e-22 79.6 1.6 1.8e-22 79.4 1.4 1.2 1 1 0 1 1 1 1 Dynein light chain type 1 Gemini_mov PF01708.16 ORF27095 - 0.042 13.6 0.2 0.077 12.8 0.2 1.4 1 0 0 1 1 1 0 Geminivirus putative movement protein DUF892 PF05974.12 ORF26934 - 0.054 13.5 0.0 0.065 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF892) Pkinase PF00069.25 ORF26765 - 9.1e-08 31.8 0.3 4.2e-05 23.0 0.0 2.1 1 1 1 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF26765 - 0.053 12.8 0.1 0.065 12.5 0.1 1.4 1 1 0 1 1 1 0 Protein tyrosine kinase TBCA PF02970.16 ORF2616 - 5.5e-23 81.1 10.4 6.6e-23 80.8 10.4 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor A DUF4298 PF14131.6 ORF2616 - 0.0037 17.2 4.2 0.065 13.2 0.2 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4298) Coagulase PF08764.10 ORF2616 - 0.0049 17.1 6.7 0.005 17.1 6.7 1.0 1 0 0 1 1 1 1 Staphylococcus aureus coagulase DHR10 PF18595.1 ORF2616 - 0.008 16.2 8.8 0.029 14.4 8.8 1.7 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain COG7 PF10191.9 ORF2616 - 0.0091 14.3 0.7 0.01 14.1 0.7 1.0 1 0 0 1 1 1 1 Golgi complex component 7 (COG7) NPV_P10 PF05531.12 ORF2616 - 0.018 15.5 2.0 0.027 14.9 1.7 1.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein HMA PF00403.26 ORF2616 - 0.021 15.2 2.8 0.41 11.1 0.0 2.5 2 1 0 2 2 2 0 Heavy-metal-associated domain Sec34 PF04136.15 ORF2616 - 0.039 13.8 2.7 0.055 13.4 2.7 1.3 1 0 0 1 1 1 0 Sec34-like family BLOC1_2 PF10046.9 ORF2616 - 0.043 14.1 6.4 0.049 13.9 5.6 1.5 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Peptidase_C34 PF05413.11 ORF2616 - 0.06 13.6 0.2 0.11 12.7 0.1 1.5 1 1 1 2 2 2 0 Putative closterovirus papain-like endopeptidase Carboxyl_trans PF01039.22 ORF2616 - 0.063 11.9 0.2 0.067 11.8 0.2 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain DivIC PF04977.15 ORF2616 - 0.074 12.8 3.7 0.66 9.8 0.8 2.2 1 1 1 2 2 2 0 Septum formation initiator FapA PF03961.13 ORF2616 - 0.078 11.6 7.4 0.081 11.5 7.4 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A eIF-4B PF06273.11 ORF2616 - 0.09 11.8 6.7 0.1 11.6 6.7 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B APG6_N PF17675.1 ORF2616 - 0.24 12.0 11.2 0.3 11.6 11.2 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF2616 - 0.27 11.7 9.8 3.2 8.3 4.4 2.2 1 1 1 2 2 2 0 Cell division protein ZapB MapZ_EC1 PF18041.1 ORF2616 - 0.42 10.8 7.4 0.72 10.1 3.7 2.0 2 0 0 2 2 2 0 MapZ extracellular domain 1 Nup88 PF10168.9 ORF2616 - 0.47 8.2 6.6 0.49 8.2 6.6 1.0 1 0 0 1 1 1 0 Nuclear pore component PCRF PF03462.18 ORF2616 - 0.5 10.2 5.8 0.64 9.9 5.8 1.3 1 0 0 1 1 1 0 PCRF domain TMPIT PF07851.13 ORF2616 - 0.83 8.8 3.8 0.91 8.7 3.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein bZIP_1 PF00170.21 ORF2616 - 1.8 8.7 7.9 1 9.5 5.0 1.9 1 1 1 2 2 2 0 bZIP transcription factor zf_CCCH_5 PF18384.1 ORF2522 - 0.043 13.9 0.5 0.11 12.6 0.5 1.7 1 0 0 1 1 1 0 Unkempt Zinc finger domain 1 (Znf1) VGLL4 PF15245.6 ORF24469 - 0.0085 16.2 8.8 0.009 16.1 8.8 1.1 1 0 0 1 1 1 1 Transcription cofactor vestigial-like protein 4 Myticin-prepro PF10690.9 ORF24469 - 0.036 14.3 0.2 0.036 14.3 0.2 2.2 2 0 0 2 2 2 0 Myticin pre-proprotein from the mussel FLYWCH PF04500.16 ORF24469 - 0.49 10.6 3.9 0.88 9.7 3.9 1.5 1 0 0 1 1 1 0 FLYWCH zinc finger domain DUF2681 PF10883.8 ORF23708 - 0.0015 18.9 1.1 0.0018 18.6 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2681) Dynamitin PF04912.14 ORF23708 - 0.012 15.0 5.2 0.013 14.9 5.2 1.0 1 0 0 1 1 1 0 Dynamitin Nterm_IS4 PF13006.7 ORF23708 - 0.024 14.8 0.6 0.036 14.2 0.6 1.3 1 0 0 1 1 1 0 Insertion element 4 transposase N-terminal PsbX PF06596.11 ORF23708 - 0.037 14.0 0.6 0.055 13.5 0.6 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre X protein (PsbX) PemK_toxin PF02452.17 ORF23708 - 0.071 13.5 0.5 0.094 13.1 0.5 1.1 1 0 0 1 1 1 0 PemK-like, MazF-like toxin of type II toxin-antitoxin system DUF5320 PF17253.2 ORF23708 - 0.21 12.7 0.8 0.28 12.3 0.3 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5320) DivIC PF04977.15 ORF23708 - 1 9.1 10.7 1.6 8.6 6.9 2.1 1 1 1 2 2 2 0 Septum formation initiator Trp_Tyr_perm PF03222.13 ORF23605 - 0.068 12.2 0.1 0.078 12.0 0.1 1.2 1 1 0 1 1 1 0 Tryptophan/tyrosine permease family DUF4336 PF14234.6 ORF23605 - 0.083 12.1 0.0 0.095 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4336) S10_plectin PF03501.15 ORF23563 - 5.6e-31 106.5 1.1 6.5e-31 106.3 1.1 1.0 1 0 0 1 1 1 1 Plectin/S10 domain SAM_KSR1 PF13543.6 ORF22378 - 0.075 13.2 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 zf-LITAF-like PF10601.9 ORF22378 - 0.076 13.3 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain B9-C2 PF07162.11 ORF20899 - 0.0014 18.8 0.3 0.0015 18.8 0.3 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein DUF3546 PF12066.8 ORF20459 - 0.0081 16.3 0.3 0.012 15.8 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3546) DUF4661 PF15576.6 ORF20261 - 0.43 10.4 6.5 0.51 10.2 6.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) Ureide_permease PF07168.11 ORF20261 - 0.59 8.8 5.1 0.66 8.7 5.1 1.0 1 0 0 1 1 1 0 Ureide permease DUF2956 PF11169.8 ORF20077 - 0.06 13.5 0.7 7.1 6.9 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2956) MOZART1 PF12554.8 ORF19906 - 3.1e-22 78.1 0.3 4.3e-22 77.6 0.3 1.2 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated RNaseH_pPIWI_RE PF13032.6 ORF19906 - 0.084 12.8 0.0 0.096 12.6 0.0 1.1 1 0 0 1 1 1 0 RNaseH domain of pPIWI_RE YidD PF01809.18 ORF1967 - 0.031 14.1 0.7 0.055 13.4 0.1 1.7 1 1 1 2 2 2 0 Putative membrane protein insertion efficiency factor DUF2057 PF09829.9 ORF19257 - 0.037 14.2 0.3 0.04 14.1 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) WD40 PF00400.32 ORF18778 - 1.1e-05 26.0 1.8 0.031 15.2 0.1 3.1 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF18778 - 0.0026 18.0 0.0 2.2 8.6 0.0 2.6 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain SARS_X4 PF08779.10 ORF18778 - 0.0093 16.2 0.0 0.013 15.7 0.0 1.3 1 0 0 1 1 1 1 SARS coronavirus X4 like DUF848 PF05852.11 ORF18623 - 0.0041 17.3 0.8 0.0044 17.1 0.8 1.1 1 0 0 1 1 1 1 Gammaherpesvirus protein of unknown function (DUF848) TrwB_AAD_bind PF10412.9 ORF18623 - 0.0061 15.5 0.6 0.0069 15.3 0.6 1.0 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain Ndr PF03096.14 ORF18623 - 0.016 14.0 1.5 0.017 13.8 1.5 1.0 1 0 0 1 1 1 0 Ndr family TNF PF00229.18 ORF18623 - 0.036 14.0 0.7 0.055 13.4 0.5 1.4 2 0 0 2 2 2 0 TNF(Tumour Necrosis Factor) family GnsAB_toxin PF08178.11 ORF18623 - 0.088 12.8 2.0 0.55 10.2 0.5 2.7 2 1 1 3 3 3 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system DUF4795 PF16043.5 ORF18623 - 0.091 12.4 4.8 0.13 11.8 4.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) AIF-MLS PF14962.6 ORF18623 - 0.1 12.5 0.8 0.14 12.1 0.8 1.1 1 0 0 1 1 1 0 Mitochondria Localisation Sequence DpnI_C PF17726.1 ORF18623 - 0.25 11.5 4.7 0.24 11.6 2.6 1.9 1 1 1 2 2 2 0 Dam-replacing HTH domain E1_4HB PF16191.5 ORF18566 - 0.086 13.1 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle Glyco_hydro_2_C PF02836.17 ORF17239 - 0.02 14.0 0.3 0.034 13.3 0.2 1.4 1 1 1 2 2 2 0 Glycosyl hydrolases family 2, TIM barrel domain RVT_2 PF07727.14 ORF17102 - 0.018 14.7 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) DUF2681 PF10883.8 ORF16444 - 0.0015 18.9 1.1 0.0018 18.6 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2681) Dynamitin PF04912.14 ORF16444 - 0.012 15.0 5.2 0.013 14.9 5.2 1.0 1 0 0 1 1 1 0 Dynamitin Nterm_IS4 PF13006.7 ORF16444 - 0.024 14.8 0.6 0.036 14.2 0.6 1.3 1 0 0 1 1 1 0 Insertion element 4 transposase N-terminal PsbX PF06596.11 ORF16444 - 0.037 14.0 0.6 0.055 13.5 0.6 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre X protein (PsbX) PemK_toxin PF02452.17 ORF16444 - 0.071 13.5 0.5 0.094 13.1 0.5 1.1 1 0 0 1 1 1 0 PemK-like, MazF-like toxin of type II toxin-antitoxin system DUF5320 PF17253.2 ORF16444 - 0.21 12.7 0.8 0.28 12.3 0.3 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5320) DivIC PF04977.15 ORF16444 - 1 9.1 10.7 1.6 8.6 6.9 2.1 1 1 1 2 2 2 0 Septum formation initiator SPAN-X PF07458.12 ORF15372 - 0.085 13.3 1.5 0.18 12.3 1.5 1.6 1 1 0 1 1 1 0 Sperm protein associated with nucleus, mapped to X chromosome Ski_Sno PF02437.17 ORF152575 - 0.084 12.6 1.8 5.2 6.9 0.1 2.2 2 0 0 2 2 2 0 SKI/SNO/DAC family Atrophin-1 PF03154.15 ORF151092 - 0.0006 18.2 7.8 0.00067 18.1 7.8 1.1 1 0 0 1 1 1 1 Atrophin-1 family Auts2 PF15336.6 ORF151092 - 0.38 10.9 5.4 0.54 10.4 5.4 1.3 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein SRRM_C PF15230.6 ORF151092 - 1.8 9.2 13.4 0.15 12.7 8.6 1.6 2 0 0 2 2 2 0 Serine/arginine repetitive matrix protein C-terminus DUF3915 PF13054.6 ORF151092 - 6.1 6.9 12.1 10 6.1 12.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3915) DUF4374 PF14298.6 ORF150548 - 0.092 11.5 0.1 0.11 11.3 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4374) 5TM-5TMR_LYT PF07694.12 ORF149927 - 0.093 12.2 0.3 0.11 12.0 0.3 1.1 1 0 0 1 1 1 0 5TMR of 5TMR-LYT Ank_2 PF12796.7 ORF149534 - 5.8e-22 78.1 0.4 1.9e-15 57.2 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF149534 - 1.3e-21 76.0 1.1 3.7e-06 27.2 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF149534 - 2.6e-19 69.3 3.2 1.9e-08 34.7 0.1 2.4 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF149534 - 4.1e-16 57.4 0.3 0.00025 21.2 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF149534 - 2.5e-15 56.4 1.2 2.3e-05 24.6 0.1 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) DUF3251 PF11622.8 ORF149534 - 0.18 11.5 0.0 1.7 8.2 0.0 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF3251) Nse4-Nse3_bdg PF15412.6 ORF149534 - 1 9.5 4.8 1.5 9.0 0.1 2.7 3 0 0 3 3 3 0 Binding domain of Nse4/EID3 to Nse3-MAGE KNOX2 PF03791.13 ORF149178 - 0.0064 16.0 0.1 0.014 14.9 0.0 1.6 2 0 0 2 2 2 1 KNOX2 domain Phage_SSB PF16773.5 ORF148231 - 0.026 14.6 0.0 0.028 14.5 0.0 1.2 1 0 0 1 1 1 0 Lactococcus phage single-stranded DNA binding protein Ada_Zn_binding PF02805.16 ORF148231 - 0.056 13.5 0.3 0.084 12.9 0.3 1.2 1 0 0 1 1 1 0 Metal binding domain of Ada MAM PF00629.23 ORF145312 - 7e-06 26.1 0.0 7.5e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 MAM domain, meprin/A5/mu RhoGEF67_u1 PF16615.5 ORF145012 - 8.7 6.9 9.3 0.41 11.2 2.3 2.4 2 1 1 3 3 3 0 Unstructured region one on RhoGEF 6 and 7 PUB PF09409.10 ORF144512 - 0.00011 22.1 0.1 0.00018 21.4 0.1 1.4 1 1 0 1 1 1 1 PUB domain Fumerase_C PF05683.12 ORF143720 - 1.9e-45 154.7 0.0 2.1e-45 154.6 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus dsRBD2 PF17842.1 ORF143309 - 0.13 12.5 3.9 0.15 12.2 3.9 1.1 1 0 0 1 1 1 0 Double-stranded RNA binding domain 2 O-antigen_lig PF13425.6 ORF143309 - 1.8 7.3 6.4 1.9 7.2 6.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein SirA PF10747.9 ORF143309 - 2.1 8.7 7.8 2.3 8.5 7.8 1.0 1 0 0 1 1 1 0 Sporulation inhibitor of replication protein SirA Phage_tail_2 PF06199.11 ORF143159 - 0.0024 18.0 0.2 0.0038 17.3 0.2 1.3 1 0 0 1 1 1 1 Phage tail tube protein DUF423 PF04241.15 ORF142315 - 2.9e-05 24.2 0.9 6.8e-05 23.0 0.1 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF423) 7tm_6 PF02949.20 ORF141608 - 0.045 12.8 0.2 0.051 12.7 0.2 1.0 1 0 0 1 1 1 0 7tm Odorant receptor SgrT PF15894.5 ORF140747 - 0.12 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT TBCC PF07986.12 ORF139117 - 0.0027 17.4 0.1 0.0042 16.8 0.1 1.3 1 0 0 1 1 1 1 Tubulin binding cofactor C Abhydrolase_4 PF08386.10 ORF138261 - 0.034 14.3 0.1 0.039 14.1 0.1 1.1 1 0 0 1 1 1 0 TAP-like protein Mce4_CUP1 PF11887.8 ORF136308 - 0.18 11.2 0.0 0.37 10.2 0.0 1.4 2 0 0 2 2 2 0 Cholesterol uptake porter CUP1 of Mce4, putative DUF2634 PF10934.8 ORF136166 - 0.044 13.9 0.5 0.26 11.4 0.5 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2634) TPR_12 PF13424.6 ORF136010 - 0.0011 19.2 0.2 0.22 11.8 0.1 1.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF136010 - 0.032 14.1 0.9 0.18 11.8 0.0 2.4 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF136010 - 0.034 14.3 3.8 0.05 13.7 0.8 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF4810 PF16068.5 ORF136010 - 0.086 13.4 0.2 0.15 12.6 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4810) TPR_1 PF00515.28 ORF136010 - 0.19 11.6 7.0 2.6 8.0 0.0 2.8 2 1 1 3 3 3 0 Tetratricopeptide repeat InaF-motif PF15018.6 ORF135855 - 1.2 9.1 7.9 2.7 8.0 7.9 1.6 1 0 0 1 1 1 0 TRP-interacting helix Bac_DNA_binding PF00216.21 ORF134699 - 7.3e-13 48.5 2.3 8.8e-13 48.3 2.3 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein HTH_IclR PF09339.10 ORF134699 - 0.059 13.2 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Ax_dynein_light PF10211.9 ORF134280 - 9.8e-05 22.4 9.6 0.00011 22.2 9.6 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain Shugoshin_N PF07558.11 ORF134280 - 0.0056 16.5 2.2 2.1 8.3 0.1 2.6 2 0 0 2 2 2 2 Shugoshin N-terminal coiled-coil region DUF1187 PF06688.11 ORF134280 - 0.007 16.7 1.1 0.007 16.7 1.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1187) APG6_N PF17675.1 ORF134280 - 0.019 15.5 11.2 0.025 15.1 11.2 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region TBCA PF02970.16 ORF134280 - 0.13 12.6 9.6 0.21 12.0 9.6 1.5 1 1 0 1 1 1 0 Tubulin binding cofactor A ZapB PF06005.12 ORF134280 - 0.39 11.2 9.4 1.7 9.2 9.4 1.9 1 1 0 1 1 1 0 Cell division protein ZapB Spc24 PF08286.11 ORF134280 - 0.55 10.5 5.9 0.75 10.1 5.9 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 TMPIT PF07851.13 ORF134280 - 2.4 7.3 7.6 2.7 7.2 7.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein Lebercilin PF15619.6 ORF134169 - 3.8e-06 26.7 10.0 4.2e-06 26.6 10.0 1.0 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Laminin_II PF06009.12 ORF134169 - 4.6e-05 23.5 4.0 5.7e-05 23.1 4.0 1.2 1 0 0 1 1 1 1 Laminin Domain II DUF4472 PF14739.6 ORF134169 - 4.9e-05 24.0 10.8 6.2e-05 23.7 10.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4472) Spc7 PF08317.11 ORF134169 - 6.5e-05 22.0 10.4 7.3e-05 21.8 10.4 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein ADIP PF11559.8 ORF134169 - 8.3e-05 22.7 9.1 0.00014 22.0 9.1 1.4 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Atg14 PF10186.9 ORF134169 - 8.4e-05 21.8 7.2 0.0001 21.5 7.2 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 EzrA PF06160.12 ORF134169 - 0.0001 20.7 10.4 0.00012 20.4 10.4 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA Fez1 PF06818.15 ORF134169 - 0.00012 22.6 8.6 0.00018 22.1 8.6 1.3 1 0 0 1 1 1 1 Fez1 DHR10 PF18595.1 ORF134169 - 0.00018 21.5 10.4 0.00024 21.1 10.4 1.3 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain ATG16 PF08614.11 ORF134169 - 0.00019 21.7 9.4 0.00022 21.5 9.4 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF948 PF06103.11 ORF134169 - 0.00045 20.4 3.1 0.00064 19.9 3.1 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Taxilin PF09728.9 ORF134169 - 0.00053 19.3 11.1 0.00076 18.7 11.1 1.3 1 1 0 1 1 1 1 Myosin-like coiled-coil protein IFT57 PF10498.9 ORF134169 - 0.00062 18.8 6.0 0.00071 18.6 6.0 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF4201 PF13870.6 ORF134169 - 0.00063 19.5 12.4 0.00079 19.2 12.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) AAA_13 PF13166.6 ORF134169 - 0.00068 18.4 8.9 0.00075 18.3 8.9 1.0 1 0 0 1 1 1 1 AAA domain Cast PF10174.9 ORF134169 - 0.00093 17.6 8.6 0.0011 17.3 8.6 1.0 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone HAP1_N PF04849.13 ORF134169 - 0.00093 18.5 10.8 0.001 18.3 10.8 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region DUF641 PF04859.12 ORF134169 - 0.00094 19.5 8.8 0.097 13.0 6.4 2.1 1 1 1 2 2 2 2 Plant protein of unknown function (DUF641) DUF724 PF05266.14 ORF134169 - 0.0013 18.5 8.5 0.0019 18.0 8.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF134169 - 0.0016 18.5 5.0 0.002 18.2 5.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF134169 - 0.0016 17.8 8.2 0.0018 17.6 8.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) BST2 PF16716.5 ORF134169 - 0.0018 18.8 7.4 0.0018 18.8 7.4 2.0 1 1 1 2 2 2 1 Bone marrow stromal antigen 2 Tropomyosin_1 PF12718.7 ORF134169 - 0.002 18.3 19.5 0.015 15.4 15.3 2.0 1 1 1 2 2 2 2 Tropomyosin like TPR_MLP1_2 PF07926.12 ORF134169 - 0.0021 18.1 13.2 0.0059 16.7 9.0 2.0 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein DUF745 PF05335.13 ORF134169 - 0.0023 17.7 3.1 0.0027 17.5 3.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF745) DUF2046 PF09755.9 ORF134169 - 0.0023 17.2 10.2 0.0027 17.0 10.2 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) DUF16 PF01519.16 ORF134169 - 0.0031 18.0 11.2 0.096 13.2 7.5 2.0 1 1 1 2 2 2 2 Protein of unknown function DUF16 DUF3584 PF12128.8 ORF134169 - 0.0035 15.0 7.3 0.004 14.8 7.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) GAS PF13851.6 ORF134169 - 0.0041 16.5 13.8 0.011 15.1 13.7 1.5 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding HOOK PF05622.12 ORF134169 - 0.0042 15.3 11.9 0.0043 15.3 11.9 1.0 1 0 0 1 1 1 1 HOOK protein Seryl_tRNA_N PF02403.22 ORF134169 - 0.0048 17.1 9.9 0.0075 16.5 9.9 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF4200 PF13863.6 ORF134169 - 0.005 17.2 15.1 0.038 14.4 15.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4200) Fib_alpha PF08702.10 ORF134169 - 0.0053 16.9 9.0 0.18 12.0 1.1 2.2 1 1 0 2 2 2 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF134169 - 0.0053 17.0 7.9 0.0073 16.6 7.5 1.5 1 1 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 CENP-F_leu_zip PF10473.9 ORF134169 - 0.0055 16.7 13.9 0.0062 16.6 13.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Csm1_N PF18504.1 ORF134169 - 0.0056 17.0 13.3 0.21 11.9 5.0 2.4 1 1 1 2 2 2 2 Csm1 N-terminal domain Tropomyosin PF00261.20 ORF134169 - 0.0059 16.0 12.5 0.0072 15.7 12.5 1.2 1 0 0 1 1 1 1 Tropomyosin CC2-LZ PF16516.5 ORF134169 - 0.009 16.4 13.5 0.12 12.7 9.9 2.1 1 1 1 2 2 2 2 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator CENP-H PF05837.12 ORF134169 - 0.012 16.1 7.0 0.015 15.7 7.0 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) KxDL PF10241.9 ORF134169 - 0.012 15.9 6.3 0.18 12.1 6.3 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein DUF812 PF05667.11 ORF134169 - 0.012 14.5 13.6 0.025 13.5 13.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF812) HMMR_N PF15905.5 ORF134169 - 0.014 14.9 15.6 0.038 13.5 15.6 1.6 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal PKcGMP_CC PF16808.5 ORF134169 - 0.015 15.1 16.5 1.3 8.9 0.0 4.0 2 1 2 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Exonuc_VII_L PF02601.15 ORF134169 - 0.016 14.8 2.8 0.018 14.6 2.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit THOC7 PF05615.13 ORF134169 - 0.016 15.4 11.9 0.42 10.9 11.9 2.0 1 1 0 1 1 1 0 Tho complex subunit 7 BRE1 PF08647.11 ORF134169 - 0.019 15.0 14.4 0.035 14.2 14.4 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase T3SSipB PF16535.5 ORF134169 - 0.022 15.2 7.0 0.038 14.5 7.0 1.4 1 1 0 1 1 1 0 Type III cell invasion protein SipB TMF_TATA_bd PF12325.8 ORF134169 - 0.023 14.9 14.3 0.51 10.6 14.3 2.3 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Prefoldin PF02996.17 ORF134169 - 0.023 14.6 13.6 0.11 12.4 2.5 2.1 1 1 0 2 2 2 0 Prefoldin subunit DivIC PF04977.15 ORF134169 - 0.024 14.4 16.5 0.15 11.9 4.6 2.5 1 1 1 2 2 2 0 Septum formation initiator Phage_GPO PF05929.11 ORF134169 - 0.027 14.1 5.4 0.038 13.6 5.4 1.3 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase TMPIT PF07851.13 ORF134169 - 0.028 13.7 7.7 0.031 13.5 7.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein HemX PF04375.14 ORF134169 - 0.029 13.7 5.4 0.034 13.4 5.4 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Golgin_A5 PF09787.9 ORF134169 - 0.03 13.8 11.2 0.034 13.6 11.2 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 LOH1CR12 PF10158.9 ORF134169 - 0.03 14.3 2.9 0.035 14.1 2.9 1.2 1 0 0 1 1 1 0 Tumour suppressor protein Occludin_ELL PF07303.13 ORF134169 - 0.031 15.0 5.8 0.084 13.6 5.9 1.8 1 1 0 1 1 1 0 Occludin homology domain Sec8_exocyst PF04048.14 ORF134169 - 0.033 14.1 6.8 0.27 11.1 1.6 2.0 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain GrpE PF01025.19 ORF134169 - 0.034 13.8 15.0 1.2 8.8 15.0 2.1 1 1 0 1 1 1 0 GrpE Prominin PF05478.11 ORF134169 - 0.039 11.9 2.8 0.041 11.9 2.8 1.0 1 0 0 1 1 1 0 Prominin DUF4407 PF14362.6 ORF134169 - 0.04 13.3 8.1 0.067 12.5 8.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FPP PF05911.11 ORF134169 - 0.041 12.1 12.4 0.048 11.9 12.4 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil FapA PF03961.13 ORF134169 - 0.042 12.4 9.6 0.049 12.2 9.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A OmpH PF03938.14 ORF134169 - 0.046 14.0 14.1 0.11 12.9 14.1 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) GldM_N PF12081.8 ORF134169 - 0.047 13.8 7.0 0.057 13.5 7.0 1.2 1 0 0 1 1 1 0 GldM N-terminal domain TMF_DNA_bd PF12329.8 ORF134169 - 0.049 13.6 18.6 0.18 11.8 14.0 2.2 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF5082 PF16888.5 ORF134169 - 0.051 13.9 10.9 1.9 8.8 6.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Phage_GP20 PF06810.11 ORF134169 - 0.051 13.4 17.4 1.2 8.9 17.4 2.0 1 1 0 1 1 1 0 Phage minor structural protein GP20 UPF0242 PF06785.11 ORF134169 - 0.052 13.7 15.2 0.083 13.0 15.2 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus E2R135 PF11570.8 ORF134169 - 0.052 13.8 5.0 0.16 12.3 5.0 1.7 1 1 0 1 1 1 0 Coiled-coil receptor-binding R-domain of colicin E2 DASH_Spc34 PF08657.10 ORF134169 - 0.058 13.2 10.0 0.18 11.6 10.0 1.7 1 1 0 1 1 1 0 DASH complex subunit Spc34 YtxH PF12732.7 ORF134169 - 0.066 13.8 4.9 0.19 12.3 4.9 1.8 1 1 0 1 1 1 0 YtxH-like protein DUF2968 PF11180.8 ORF134169 - 0.066 12.8 4.6 0.099 12.3 4.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Jnk-SapK_ap_N PF09744.9 ORF134169 - 0.066 13.4 12.6 0.093 13.0 12.6 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Spc24 PF08286.11 ORF134169 - 0.074 13.3 14.3 0.86 9.9 6.3 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Baculo_PEP_C PF04513.12 ORF134169 - 0.077 13.0 3.7 0.16 12.0 3.6 1.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Tho2 PF11262.8 ORF134169 - 0.078 12.2 6.6 0.087 12.0 6.6 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Sec2p PF06428.11 ORF134169 - 0.084 12.8 12.9 0.3 11.1 11.2 2.0 1 1 2 3 3 3 0 GDP/GTP exchange factor Sec2p CENP-Q PF13094.6 ORF134169 - 0.096 12.9 13.2 0.89 9.7 13.1 1.9 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit DLP_helical PF18709.1 ORF134169 - 0.097 11.9 8.3 0.21 10.8 8.2 1.6 1 1 1 2 2 2 0 Dynamin-like helical domain Hrs_helical PF12210.8 ORF134169 - 0.097 13.2 8.1 1.2 9.7 8.1 2.0 1 1 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Snapin_Pallidin PF14712.6 ORF134169 - 0.098 13.1 10.3 0.22 12.0 5.3 2.0 1 1 0 1 1 1 0 Snapin/Pallidin FlaC_arch PF05377.11 ORF134169 - 0.1 13.0 11.9 0.42 11.0 3.1 2.4 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) DUF4298 PF14131.6 ORF134169 - 0.1 12.6 9.5 0.79 9.7 0.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) TolA_bind_tri PF16331.5 ORF134169 - 0.11 12.6 10.3 0.86 9.7 10.2 2.1 1 1 0 1 1 1 0 TolA binding protein trimerisation WXG100 PF06013.12 ORF134169 - 0.11 12.7 2.5 0.66 10.2 0.4 2.1 1 1 1 2 2 2 0 Proteins of 100 residues with WXG HrpB7 PF09486.10 ORF134169 - 0.11 12.8 7.1 0.21 11.9 7.1 1.5 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) PRKG1_interact PF15898.5 ORF134169 - 0.13 13.2 9.3 0.78 10.7 3.7 2.0 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain FlxA PF14282.6 ORF134169 - 0.13 12.2 12.3 3.3 7.7 12.4 2.0 1 1 0 1 1 1 0 FlxA-like protein Lzipper-MIP1 PF14389.6 ORF134169 - 0.13 12.5 10.3 0.6 10.4 3.2 2.4 2 1 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 Cep57_MT_bd PF06657.13 ORF134169 - 0.14 12.6 9.4 0.28 11.7 8.9 1.7 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 USP8_interact PF08941.10 ORF134169 - 0.16 11.8 6.5 0.82 9.5 1.2 2.0 1 1 0 2 2 2 0 USP8 interacting Med9 PF07544.13 ORF134169 - 0.18 11.9 7.4 0.47 10.6 7.4 1.8 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 MetOD2 PF18548.1 ORF134169 - 0.18 11.9 5.9 0.87 9.7 0.5 2.2 2 0 0 2 2 2 0 Metanogen output domain 2 Lectin_N PF03954.14 ORF134169 - 0.19 11.5 7.8 0.31 10.8 2.2 2.2 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Swi5 PF07061.11 ORF134169 - 0.19 11.8 11.4 0.17 12.0 1.6 2.2 1 1 1 2 2 2 0 Swi5 HIP1_clath_bdg PF16515.5 ORF134169 - 0.19 12.3 12.6 0.35 11.5 2.4 2.1 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ZapB PF06005.12 ORF134169 - 0.2 12.1 14.8 0.47 10.9 2.4 2.1 1 1 1 2 2 2 0 Cell division protein ZapB Rho_Binding PF08912.11 ORF134169 - 0.2 12.5 16.8 0.24 12.3 6.3 2.5 1 1 1 2 2 2 0 Rho Binding V-SNARE PF05008.15 ORF134169 - 0.23 11.8 11.9 0.22 11.9 4.3 2.3 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus Sec34 PF04136.15 ORF134169 - 0.23 11.3 9.7 0.41 10.5 2.0 1.9 1 1 1 2 2 2 0 Sec34-like family LPP PF04728.13 ORF134169 - 0.25 11.8 9.3 0.42 11.0 5.1 2.3 1 1 0 2 2 2 0 Lipoprotein leucine-zipper NPV_P10 PF05531.12 ORF134169 - 0.26 11.8 11.0 0.19 12.2 6.3 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein V_ATPase_I PF01496.19 ORF134169 - 0.29 9.0 6.1 0.36 8.7 6.1 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ABC_tran_CTD PF16326.5 ORF134169 - 0.34 11.2 17.2 0.63 10.3 11.9 2.6 1 1 2 3 3 3 0 ABC transporter C-terminal domain HalX PF08663.10 ORF134169 - 0.34 11.3 11.5 0.65 10.4 6.3 2.8 1 1 2 3 3 3 0 HalX domain DUF2203 PF09969.9 ORF134169 - 0.35 11.6 5.1 0.56 10.9 5.0 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) PCRF PF03462.18 ORF134169 - 0.35 10.7 7.3 0.43 10.4 7.3 1.2 1 0 0 1 1 1 0 PCRF domain DUF4337 PF14235.6 ORF134169 - 0.35 11.0 5.9 0.44 10.6 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4446 PF14584.6 ORF134169 - 0.36 10.8 8.7 1.6 8.7 0.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF4795 PF16043.5 ORF134169 - 0.42 10.2 13.6 1.1 8.9 13.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) NYD-SP28 PF14772.6 ORF134169 - 0.43 10.7 17.1 0.62 10.1 1.3 2.7 1 1 1 2 2 2 0 Sperm tail YabA PF06156.13 ORF134169 - 0.49 11.1 10.5 7.1 7.3 10.0 2.0 1 1 0 1 1 1 0 Initiation control protein YabA SseC PF04888.12 ORF134169 - 0.54 9.8 8.9 0.095 12.3 4.9 1.6 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family LMBR1 PF04791.16 ORF134169 - 0.58 9.0 2.7 0.63 8.9 2.7 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein FliD_N PF02465.18 ORF134169 - 0.67 10.7 4.3 1.9 9.2 4.3 1.8 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus XhlA PF10779.9 ORF134169 - 0.72 10.1 12.4 0.37 11.0 1.9 2.1 1 1 2 3 3 3 0 Haemolysin XhlA DPM3 PF08285.11 ORF134169 - 0.72 10.1 7.2 5.2 7.3 1.7 2.3 1 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Hemagglutinin PF00509.18 ORF134169 - 0.74 8.2 5.2 0.9 7.9 5.2 1.3 1 0 0 1 1 1 0 Haemagglutinin DUF4140 PF13600.6 ORF134169 - 0.85 10.1 10.4 2.8 8.5 1.7 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF1515 PF07439.11 ORF134169 - 0.9 9.6 2.8 4.5 7.3 2.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) APG6_N PF17675.1 ORF134169 - 0.91 10.0 19.2 2.5 8.7 19.2 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region Ax_dynein_light PF10211.9 ORF134169 - 0.92 9.4 12.8 0.61 10.0 10.7 1.6 1 1 1 2 2 2 0 Axonemal dynein light chain Prefoldin_2 PF01920.20 ORF134169 - 0.94 9.5 16.6 2.8 8.0 6.1 2.2 1 1 1 2 2 2 0 Prefoldin subunit CASP_C PF08172.12 ORF134169 - 0.98 8.7 10.2 0.18 11.1 1.0 2.1 1 1 1 2 2 2 0 CASP C terminal FAM76 PF16046.5 ORF134169 - 1 8.7 9.0 1.9 7.7 8.7 1.5 1 1 0 1 1 1 0 FAM76 protein DUF2570 PF10828.8 ORF134169 - 1.2 9.0 7.1 0.35 10.7 2.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) DASH_Dam1 PF08653.10 ORF134169 - 1.3 8.9 3.9 3 7.7 1.0 2.6 1 1 1 2 2 2 0 DASH complex subunit Dam1 Cluap1 PF10234.9 ORF134169 - 1.3 8.4 12.6 5.3 6.4 1.8 1.7 1 1 1 2 2 2 0 Clusterin-associated protein-1 SlyX PF04102.12 ORF134169 - 1.4 9.6 11.8 6 7.6 10.2 2.4 1 1 1 2 2 2 0 SlyX Wtap PF17098.5 ORF134169 - 1.5 8.8 12.1 0.4 10.6 2.0 2.1 1 1 1 2 2 2 0 WTAP/Mum2p family CHD5 PF04420.14 ORF134169 - 1.7 8.5 5.7 0.99 9.2 2.0 1.9 1 1 1 2 2 2 0 CHD5-like protein RPW8 PF05659.11 ORF134169 - 1.7 8.3 10.0 9.9 5.9 5.7 2.6 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Mst1_SARAH PF11629.8 ORF134169 - 1.8 8.7 11.7 0.5 10.5 1.0 2.6 2 1 0 2 2 2 0 C terminal SARAH domain of Mst1 Sas10_Utp3 PF04000.15 ORF134169 - 5.7 7.6 8.6 1.9e+02 2.8 8.6 2.5 1 1 0 1 1 1 0 Sas10/Utp3/C1D family ACCA PF03255.14 ORF134169 - 8.5 6.2 9.8 30 4.5 9.8 1.9 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Sulfotransfer_1 PF00685.27 ORF133781 - 0.026 14.0 0.1 0.031 13.7 0.1 1.1 1 0 0 1 1 1 0 Sulfotransferase domain DUF2617 PF10936.8 ORF133781 - 0.027 14.5 0.2 0.033 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF2617 DUF3338 PF11819.8 ORF132148 - 0.075 13.0 6.0 0.078 13.0 4.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3338) DUF956 PF06115.11 ORF131557 - 0.072 12.8 0.0 0.095 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF956) HD PF01966.22 ORF131534 - 2.2e-06 27.9 0.4 2.5e-06 27.7 0.4 1.2 1 0 0 1 1 1 1 HD domain Toxin_23 PF08093.11 ORF131089 - 0.18 12.0 2.3 0.21 11.8 0.7 2.0 2 1 0 2 2 2 0 Magi 5 toxic peptide family RhoGEF67_u1 PF16615.5 ORF131075 - 0.1 13.1 0.8 0.2 12.2 0.8 1.5 1 0 0 1 1 1 0 Unstructured region one on RhoGEF 6 and 7 Rhabdo_ncap_2 PF03216.13 ORF127680 - 0.073 12.5 0.0 0.073 12.5 0.0 1.1 1 0 0 1 1 1 0 Rhabdovirus nucleoprotein DUF1199 PF06712.11 ORF12766 - 0.15 12.1 0.2 0.24 11.4 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1199) MetJ PF01340.20 ORF125616 - 3.6e-59 196.8 0.0 4.1e-59 196.6 0.0 1.0 1 0 0 1 1 1 1 Met Apo-repressor, MetJ SWI2_SNF2 PF18766.1 ORF125616 - 0.062 13.0 0.0 0.068 12.8 0.0 1.1 1 0 0 1 1 1 0 SWI2/SNF2 ATPase AphA_like PF14557.6 ORF125616 - 0.089 12.5 0.0 0.099 12.4 0.0 1.2 1 0 0 1 1 1 0 Putative AphA-like transcriptional regulator EF-hand_8 PF13833.6 ORF12541 - 0.032 14.1 0.1 0.046 13.6 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_7 PF13499.6 ORF12541 - 0.085 13.3 0.1 0.13 12.8 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain pair MTS_N PF08468.11 ORF123011 - 0.0023 18.0 0.5 0.0033 17.5 0.4 1.3 1 1 0 1 1 1 1 Methyltransferase small domain N-terminal TRAF_BIRC3_bd PF16673.5 ORF123011 - 0.018 14.8 1.0 0.032 14.0 0.2 1.8 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain GTP_EFTU_D3 PF03143.17 ORF123011 - 0.11 12.8 0.1 0.12 12.6 0.1 1.3 1 1 0 1 1 1 0 Elongation factor Tu C-terminal domain Chitin_synth_1 PF01644.17 ORF122886 - 5.1e-15 55.8 0.0 5.5e-15 55.7 0.0 1.1 1 0 0 1 1 1 1 Chitin synthase L_protein_N PF15518.6 ORF122886 - 0.042 13.7 0.2 0.074 12.9 0.1 1.6 1 1 1 2 2 2 0 L protein N-terminus DUF116 PF01976.17 ORF122870 - 0.19 11.2 0.9 0.24 10.9 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function DUF116 CRT-like PF08627.10 ORF122374 - 0.017 14.1 0.2 0.021 13.8 0.2 1.1 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like Fer4_12 PF13353.6 ORF121728 - 3.3e-31 108.4 0.0 3.6e-31 108.3 0.0 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 ORF121728 - 6.1e-22 78.0 0.0 7.3e-22 77.7 0.0 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF4123 PF13503.6 ORF120241 - 0.087 13.2 0.6 0.12 12.7 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4123) Fumarate_red_D PF02313.17 ORF120220 - 0.084 13.0 2.5 0.13 12.4 2.4 1.4 1 1 0 1 1 1 0 Fumarate reductase subunit D DUF5546 PF17700.1 ORF120011 - 0.042 14.2 5.5 0.044 14.2 5.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5546) VirB3 PF05101.13 ORF11974 - 0.062 13.5 0.7 0.59 10.4 0.0 2.0 1 1 1 2 2 2 0 Type IV secretory pathway, VirB3-like protein COPI_assoc PF08507.10 ORF119229 - 1.3e-06 28.4 8.0 1.5e-06 28.3 8.0 1.0 1 0 0 1 1 1 1 COPI associated protein OppC_N PF12911.7 ORF119229 - 0.1 12.6 1.8 2.5 8.2 0.1 2.3 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C DUF1206 PF06724.11 ORF119229 - 0.25 11.4 0.2 0.25 11.4 0.2 2.1 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1206) Mtr2 PF10429.9 ORF118339 - 0.14 12.0 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 MT PF12777.7 ORF118287 - 2.3e-14 53.2 0.5 2.6e-14 53.0 0.5 1.0 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Exonuc_VII_S PF02609.16 ORF118287 - 0.0041 17.2 2.7 0.006 16.6 2.7 1.2 1 0 0 1 1 1 1 Exonuclease VII small subunit HrpB7 PF09486.10 ORF118287 - 0.019 15.4 1.2 0.022 15.1 1.2 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) Utp12 PF04003.12 ORF118287 - 0.052 13.8 0.0 0.077 13.3 0.0 1.2 1 0 0 1 1 1 0 Dip2/Utp12 Family CCDC-167 PF15188.6 ORF118287 - 0.06 13.7 0.1 0.085 13.2 0.1 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Peptidase_S49_N PF08496.10 ORF118110 - 0.014 15.5 6.0 0.016 15.3 6.0 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal AP3D1 PF06375.11 ORF118110 - 0.46 10.7 8.6 0.5 10.6 8.6 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 B9-C2 PF07162.11 ORF118051 - 0.0014 18.8 0.3 0.0015 18.8 0.3 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein MTS_N PF08468.11 ORF114413 - 0.0023 18.0 0.5 0.0033 17.5 0.4 1.3 1 1 0 1 1 1 1 Methyltransferase small domain N-terminal TRAF_BIRC3_bd PF16673.5 ORF114413 - 0.018 14.8 1.0 0.032 14.0 0.2 1.8 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain GTP_EFTU_D3 PF03143.17 ORF114413 - 0.11 12.8 0.1 0.12 12.6 0.1 1.3 1 1 0 1 1 1 0 Elongation factor Tu C-terminal domain UPF0239 PF06783.11 ORF114283 - 0.011 15.9 3.0 0.011 15.9 3.0 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0239) MTABC_N PF16185.5 ORF114283 - 0.22 11.0 0.0 0.3 10.5 0.0 1.2 1 1 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region Phytoreo_Pns PF05451.11 ORF113883 - 0.039 13.1 0.0 0.046 12.8 0.0 1.1 1 0 0 1 1 1 0 Phytoreovirus nonstructural protein Pns10/11 CART PF06373.11 ORF113464 - 0.032 14.4 0.3 0.059 13.6 0.3 1.5 1 0 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) Arteri_env PF01606.16 ORF112618 - 0.043 13.7 0.1 0.057 13.3 0.1 1.1 1 0 0 1 1 1 0 Arterivirus envelope protein CIA30 PF08547.12 ORF112305 - 0.12 12.4 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) MgtE PF01769.16 ORF109074 - 0.78 10.1 16.5 0.97 9.8 16.5 1.1 1 0 0 1 1 1 0 Divalent cation transporter QVR PF17064.5 ORF108800 - 0.02 15.1 1.9 0.02 15.1 1.9 1.5 1 1 0 1 1 1 0 Sleepless protein DUF4123 PF13503.6 ORF107961 - 0.087 13.2 0.6 0.12 12.7 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4123) CIA30 PF08547.12 ORF107841 - 0.12 12.4 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) Cyclin_N PF00134.23 ORF107760 - 0.00074 19.3 0.2 0.0013 18.5 0.1 1.4 1 1 0 1 1 1 1 Cyclin, N-terminal domain HTH_7 PF02796.15 ORF107760 - 0.082 13.0 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase YrhK PF14145.6 ORF107525 - 5.2 7.0 15.7 9.4 6.2 9.9 2.4 2 0 0 2 2 2 0 YrhK-like protein CIA30 PF08547.12 ORF107324 - 0.049 13.6 0.2 0.057 13.4 0.2 1.1 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) HA PF03457.14 ORF107324 - 0.057 13.8 0.0 0.063 13.6 0.0 1.3 1 0 0 1 1 1 0 Helicase associated domain LCE PF14672.6 ORF106069 - 3.2 8.4 8.2 0.39 11.4 2.3 2.2 1 1 1 2 2 2 0 Late cornified envelope Fumarate_red_D PF02313.17 ORF105112 - 0.084 13.0 2.5 0.13 12.4 2.4 1.4 1 1 0 1 1 1 0 Fumarate reductase subunit D Period_C PF12114.8 ORF104776 - 2.7 7.5 7.6 3.9 7.0 7.6 1.3 1 0 0 1 1 1 0 Period protein 2/3C-terminal region Rrn6 PF10214.9 ORF103600 - 3.1 6.2 6.3 3.6 6.0 6.3 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Tankyrase_bdg_C PF15327.6 ORF103077 - 0.056 13.9 0.1 0.064 13.7 0.1 1.1 1 0 0 1 1 1 0 Tankyrase binding protein C terminal domain PaRep2a PF07903.11 ORF102630 - 0.034 14.0 0.2 0.051 13.4 0.2 1.2 1 0 0 1 1 1 0 PaRep2a protein Pkinase PF00069.25 ORF102374 - 1.5e-36 126.1 0.0 1.6e-36 126.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF102374 - 7.9e-17 61.4 0.0 9.1e-17 61.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF102374 - 7.1e-07 28.8 0.0 9.8e-07 28.4 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF102374 - 0.00058 18.8 0.0 0.00062 18.7 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF102374 - 0.0018 17.4 0.0 0.0018 17.4 0.0 1.2 1 0 0 1 1 1 1 Seadornavirus VP7 Choline_kinase PF01633.20 ORF102374 - 0.0088 15.7 0.1 0.011 15.3 0.1 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 ORF102374 - 0.011 15.7 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF102374 - 0.027 13.8 0.1 0.031 13.6 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF102374 - 0.06 12.3 0.0 0.076 11.9 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain DUF974 PF06159.13 ORF101683 - 0.079 12.8 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF974) DUF2441 PF10386.9 ORF101648 - 0.13 12.2 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2441) Castor1_N PF18700.1 ORF101412 - 0.071 13.0 0.7 0.67 9.8 0.3 2.2 2 0 0 2 2 2 0 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Tox-ART-HYD1 PF15633.6 ORF100717 - 0.071 13.8 0.1 0.091 13.5 0.1 1.4 1 1 0 1 1 1 0 HYD1 signature containing ADP-ribosyltransferase YnfE PF17452.2 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.0019 18.5 5.2 0.0039 17.5 3.8 1.9 1 1 1 2 2 2 1 Uncharacterized YnfE-like Seryl_tRNA_N PF02403.22 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.027 14.7 4.3 0.037 14.3 4.3 1.3 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Nsp1_C PF05064.13 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.054 13.3 7.3 0.26 11.1 7.3 2.0 1 1 0 1 1 1 0 Nsp1-like C-terminal region HlyD_D23 PF16576.5 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.086 12.1 0.3 0.091 12.0 0.3 1.1 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion BLOC1_2 PF10046.9 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.11 12.8 6.0 1 9.7 1.1 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 OmpH PF03938.14 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.14 12.5 8.5 0.97 9.8 3.9 2.1 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Sof1 PF04158.14 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.26 11.6 5.1 0.72 10.2 5.1 1.8 1 1 0 1 1 1 0 Sof1-like domain Spore_III_AB PF09548.10 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.57 10.3 8.0 0.33 11.1 2.1 1.9 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) CCM2_C PF16545.5 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.62 10.6 4.9 7.5 7.1 0.1 2.2 1 1 1 2 2 2 0 Cerebral cavernous malformation protein, harmonin-homology FapA PF03961.13 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 0.81 8.2 6.3 0.9 8.1 6.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A bZIP_1 PF00170.21 NODE_55590_length_310_cov_1.007273_g47655_i0forward_frame_1 - 1.3 9.2 9.3 0.44 10.7 2.2 2.8 1 1 2 3 3 3 0 bZIP transcription factor AA_permease PF00324.21 NODE_55589_length_310_cov_1.156364_g47654_i0reverse_frame_1 - 0.19 10.3 0.0 0.22 10.1 0.0 1.0 1 0 0 1 1 1 0 Amino acid permease 2TM PF13239.6 NODE_55588_length_310_cov_1.214545_g47653_i0forward_frame_1 - 0.049 13.9 0.9 0.065 13.6 0.9 1.2 1 0 0 1 1 1 0 2TM domain DUF1461 PF07314.11 NODE_55578_length_310_cov_1.661818_g47643_i0forward_frame_1 - 0.019 14.9 0.6 0.023 14.6 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) DUF4730 PF15873.5 NODE_55574_length_310_cov_1.734545_g47639_i0forward_frame_1 - 0.06 13.6 0.2 0.12 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4730) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks254.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks254.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks254.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks254.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ery_res_leader2 PF08057.11 NODE_55569_length_310_cov_1.858182_g47634_i0reverse_frame_1 - 0.064 13.7 0.6 0.19 12.3 0.6 1.8 1 0 0 1 1 1 0 Erythromycin resistance leader peptide DCR PF14047.6 NODE_55569_length_310_cov_1.858182_g47634_i0forward_frame_1 - 0.037 14.2 0.1 0.19 11.9 0.1 1.9 1 1 1 2 2 2 0 Dppa2/4 conserved region MMTV_SAg PF01054.17 NODE_55566_length_310_cov_1.909091_g47631_i0reverse_frame_1 - 0.14 11.7 0.2 0.16 11.5 0.2 1.2 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen DUF3730 PF12530.8 NODE_55564_length_310_cov_2.007273_g47629_i0reverse_frame_1 - 0.07 12.7 0.1 0.073 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3730) Epiglycanin_C PF14654.6 NODE_55564_length_310_cov_2.007273_g47629_i0forward_frame_1 - 0.049 13.7 0.1 0.077 13.1 0.1 1.3 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region FGF PF00167.18 NODE_55558_length_310_cov_2.240000_g47623_i0reverse_frame_1 - 0.056 13.6 0.2 0.074 13.2 0.2 1.3 1 0 0 1 1 1 0 Fibroblast growth factor DUF478 PF04334.12 NODE_55558_length_310_cov_2.240000_g47623_i0reverse_frame_1 - 0.12 12.4 0.2 0.25 11.4 0.0 1.6 2 1 1 3 3 3 0 Protein of unknown function (DUF478) BBS2_Mid PF14783.6 NODE_55556_length_310_cov_2.280000_g47621_i0reverse_frame_1 - 0.085 12.9 0.0 3.9 7.5 0.0 2.0 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 2, middle region Squash PF00299.18 NODE_55556_length_310_cov_2.280000_g47621_i0forward_frame_1 - 0.45 10.6 2.0 26 4.9 0.1 2.4 2 0 0 2 2 2 0 Squash family serine protease inhibitor BH4 PF02180.17 NODE_55549_length_310_cov_2.498182_g47614_i0reverse_frame_1 - 5.6 6.9 7.6 1.8 8.4 0.1 2.2 2 0 0 2 2 2 0 Bcl-2 homology region 4 GTP_EFTU PF00009.27 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 9.3e-29 100.4 0.3 1e-28 100.2 0.3 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.00025 21.1 0.1 0.0033 17.5 0.1 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.02 14.1 0.5 0.11 11.6 0.1 1.9 1 1 0 2 2 2 0 G-protein alpha subunit AIG1 PF04548.16 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.023 14.0 0.4 0.12 11.7 0.4 1.9 1 1 0 1 1 1 0 AIG1 family Dynamin_N PF00350.23 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.04 14.0 0.1 7.5 6.6 0.1 2.1 2 0 0 2 2 2 0 Dynamin family SRPRB PF09439.10 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.052 13.0 0.2 0.53 9.7 0.2 2.2 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.14 11.7 0.0 0.66 9.5 0.0 1.9 2 0 0 2 2 2 0 Ferrous iron transport protein B ATP_bind_1 PF03029.17 NODE_55538_length_310_cov_2.934545_g47603_i0forward_frame_1 - 0.17 11.7 0.2 4.1 7.1 0.2 2.1 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein PPI_Ypi1 PF07491.11 NODE_55533_length_310_cov_3.552727_g47598_i0forward_frame_1 - 8 6.4 12.5 1.9 8.4 1.2 2.7 2 1 0 2 2 2 0 Protein phosphatase inhibitor Ribonuc_red_sm PF00268.21 NODE_55532_length_310_cov_3.636364_g47597_i0forward_frame_1 - 2.2e-13 50.3 1.0 2.2e-13 50.3 1.0 1.6 2 0 0 2 2 2 1 Ribonucleotide reductase, small chain START PF01852.19 NODE_55531_length_310_cov_3.654545_g47596_i0forward_frame_1 - 0.00011 21.7 0.0 0.00012 21.5 0.0 1.1 1 0 0 1 1 1 1 START domain Yopt PF09467.10 NODE_55531_length_310_cov_3.654545_g47596_i0forward_frame_1 - 0.083 13.0 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Hypothetical protein Yopt DUF4929 PF16283.5 NODE_55530_length_310_cov_3.658182_g47595_i0reverse_frame_1 - 0.0014 17.7 0.4 0.0017 17.4 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4929) START PF01852.19 NODE_55528_length_310_cov_4.112727_g47593_i0forward_frame_1 - 0.00011 21.7 0.0 0.00012 21.5 0.0 1.1 1 0 0 1 1 1 1 START domain Yopt PF09467.10 NODE_55528_length_310_cov_4.112727_g47593_i0forward_frame_1 - 0.081 13.0 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Hypothetical protein Yopt VEFS-Box PF09733.9 NODE_55526_length_310_cov_9.327273_g47591_i0forward_frame_1 - 3.7 7.4 10.1 1.9 8.3 8.0 1.6 1 1 1 2 2 2 0 VEFS-Box of polycomb protein PRA1 PF03208.19 NODE_55524_length_310_cov_36.934545_g47589_i0reverse_frame_1 - 0.054 13.1 11.7 0.068 12.8 11.7 1.1 1 0 0 1 1 1 0 PRA1 family protein PBP1_TM PF14812.6 NODE_55520_length_310_cov_44.556364_g47585_i0forward_frame_1 - 0.084 13.3 10.3 1.3 9.4 1.4 2.3 1 1 1 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal TP2 PF01254.18 NODE_55513_length_310_cov_60.261818_g47578_i0reverse_frame_1 - 1.5 9.4 13.5 1.7 9.3 13.5 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 SP_C-Propep PF08999.10 NODE_55513_length_310_cov_60.261818_g47578_i0forward_frame_1 - 6.6 6.6 11.9 11 5.8 11.9 1.4 1 1 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF872 PF05915.12 NODE_55512_length_310_cov_62.269091_g47577_i0reverse_frame_1 - 2.1e-12 47.2 3.3 2.7e-12 46.9 3.3 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) UPF0242 PF06785.11 NODE_55512_length_310_cov_62.269091_g47577_i0reverse_frame_1 - 0.55 10.3 2.9 0.59 10.2 2.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Torus PF16131.5 NODE_55501_length_310_cov_79.003636_g47566_i0forward_frame_1 - 0.01 16.5 5.9 0.015 16.0 5.9 1.3 1 0 0 1 1 1 0 Torus domain Glyco_trans_2_3 PF13632.6 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_1 - 1.3e-05 25.2 1.2 1.5e-05 25.0 1.2 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Chitin_synth_2 PF03142.15 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_1 - 0.00013 20.8 0.1 0.00014 20.7 0.1 1.1 1 0 0 1 1 1 1 Chitin synthase Cellulose_synt PF03552.14 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_1 - 0.014 13.9 0.2 0.023 13.2 0.2 1.4 1 1 1 2 2 2 0 Cellulose synthase Glyco_tranf_2_3 PF13641.6 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_1 - 0.19 11.6 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF2441 PF10386.9 NODE_55488_length_310_cov_107.094545_g47553_i0reverse_frame_1 - 0.011 15.7 0.2 0.045 13.8 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2441) EphA2_TM PF14575.6 NODE_55485_length_310_cov_122.720000_g47550_i0forward_frame_1 - 0.073 14.0 1.1 0.09 13.7 1.1 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Disulph_isomer PF06491.11 NODE_55483_length_310_cov_129.461818_g47548_i0forward_frame_1 - 0.054 13.6 0.0 0.059 13.5 0.0 1.1 1 0 0 1 1 1 0 Disulphide isomerase MDM31_MDM32 PF08118.11 NODE_55483_length_310_cov_129.461818_g47548_i0forward_frame_1 - 0.86 8.2 2.8 0.96 8.0 2.8 1.0 1 0 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins DUF2791 PF10923.8 NODE_55477_length_310_cov_341.963636_g47542_i0reverse_frame_1 - 0.025 13.4 0.0 0.025 13.4 0.0 1.1 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) DUF4229 PF14012.6 NODE_55477_length_310_cov_341.963636_g47542_i0forward_frame_1 - 4.2 7.5 9.2 4.4 7.5 1.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) Dishevelled PF02377.15 NODE_55475_length_310_cov_1500.527273_g47540_i0reverse_frame_1 - 0.021 15.3 3.0 0.021 15.3 3.0 1.3 1 1 0 1 1 1 0 Dishevelled specific domain EF1G PF00647.19 NODE_55473_length_311_cov_1.126812_g47538_i0forward_frame_1 - 0.13 12.3 4.1 0.17 11.9 4.1 1.2 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain DUF5079 PF16882.5 NODE_55469_length_311_cov_1.351449_g47534_i0forward_frame_1 - 0.0027 17.6 2.5 0.0032 17.4 2.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5079) Caud_tail_N PF16838.5 NODE_55469_length_311_cov_1.351449_g47534_i0forward_frame_1 - 0.014 15.8 0.1 0.019 15.4 0.1 1.1 1 0 0 1 1 1 0 Caudoviral major tail protein N-terminus Strabismus PF06638.11 NODE_55469_length_311_cov_1.351449_g47534_i0forward_frame_1 - 0.19 10.4 0.7 0.21 10.2 0.7 1.0 1 0 0 1 1 1 0 Strabismus protein TIG PF01833.24 NODE_55468_length_311_cov_1.355072_g47533_i0forward_frame_1 - 1.4e-09 37.8 4.5 1.8e-09 37.6 4.5 1.2 1 0 0 1 1 1 1 IPT/TIG domain DUF5008 PF16400.5 NODE_55468_length_311_cov_1.355072_g47533_i0forward_frame_1 - 0.0012 18.9 1.2 0.0015 18.6 1.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5008) RINGv PF12906.7 NODE_55461_length_311_cov_1.641304_g47526_i0forward_frame_1 - 3.5e-10 39.8 11.2 6.9e-10 38.9 10.9 1.7 1 1 0 1 1 1 1 RING-variant domain zf-RING_2 PF13639.6 NODE_55461_length_311_cov_1.641304_g47526_i0forward_frame_1 - 0.033 14.5 10.9 0.14 12.5 11.1 1.9 1 1 1 2 2 2 0 Ring finger domain Cadherin_2 PF08266.12 NODE_55459_length_311_cov_1.847826_g47524_i0reverse_frame_1 - 0.094 12.6 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Cadherin-like DUF3704 PF12488.8 NODE_55459_length_311_cov_1.847826_g47524_i0forward_frame_1 - 0.022 14.4 0.3 0.047 13.3 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3704) FG-GAP PF01839.23 NODE_55457_length_311_cov_1.876812_g47522_i0forward_frame_1 - 0.00013 22.0 0.1 0.00051 20.1 0.3 1.7 2 0 0 2 2 2 1 FG-GAP repeat VCBS PF13517.6 NODE_55457_length_311_cov_1.876812_g47522_i0forward_frame_1 - 0.0094 16.5 0.0 0.012 16.2 0.0 1.3 1 0 0 1 1 1 1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella TM2 PF05154.16 NODE_55452_length_311_cov_1.978261_g47517_i0reverse_frame_1 - 0.1 12.9 0.8 0.16 12.3 0.8 1.3 1 0 0 1 1 1 0 TM2 domain TMEM173 PF15009.6 NODE_55450_length_311_cov_1.992754_g47515_i0forward_frame_1 - 0.13 11.4 0.9 0.15 11.2 0.9 1.0 1 0 0 1 1 1 0 Transmembrane protein 173 zf-C2HE PF16278.5 NODE_55449_length_311_cov_2.010870_g47514_i0forward_frame_1 - 0.2 12.1 1.5 0.51 10.8 0.2 2.0 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Rep_fac_C PF08542.11 NODE_55448_length_311_cov_2.032609_g47513_i0reverse_frame_1 - 0.015 15.7 0.2 0.024 15.0 0.2 1.3 1 1 0 1 1 1 0 Replication factor C C-terminal domain DNA_pol3_finger PF17657.1 NODE_55439_length_311_cov_2.297101_g47504_i0reverse_frame_1 - 0.017 14.5 0.1 0.02 14.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial DNA polymerase III alpha subunit finger domain DUF520 PF04461.13 NODE_55436_length_311_cov_2.333333_g47501_i0forward_frame_1 - 9.4e-05 22.6 0.0 0.00012 22.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF520) ERAP1_C PF11838.8 NODE_55431_length_311_cov_2.576087_g47496_i0forward_frame_1 - 0.021 14.4 0.1 0.024 14.2 0.1 1.0 1 0 0 1 1 1 0 ERAP1-like C-terminal domain Telomere_res PF16684.5 NODE_55425_length_311_cov_2.923913_g47490_i0reverse_frame_1 - 0.033 13.7 0.0 0.037 13.5 0.0 1.0 1 0 0 1 1 1 0 Telomere resolvase Metallophos PF00149.28 NODE_55425_length_311_cov_2.923913_g47490_i0forward_frame_1 - 0.06 13.8 0.0 0.07 13.6 0.0 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase CNOT11 PF10155.9 NODE_55417_length_311_cov_4.181159_g47482_i0reverse_frame_1 - 0.067 13.4 4.8 1.2 9.4 0.8 2.4 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 11 Gastrin PF00918.17 NODE_55414_length_311_cov_46.130435_g47479_i0reverse_frame_1 - 0.022 15.7 2.7 0.025 15.6 2.7 1.1 1 0 0 1 1 1 0 Gastrin/cholecystokinin family TMV_coat PF00721.21 NODE_55414_length_311_cov_46.130435_g47479_i0reverse_frame_1 - 0.11 12.3 3.3 0.14 12.0 3.3 1.2 1 0 0 1 1 1 0 Virus coat protein (TMV like) AMP-binding_C_2 PF14535.6 NODE_55411_length_311_cov_52.369565_g47476_i0forward_frame_1 - 0.007 16.7 0.9 0.0094 16.2 0.9 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain R3H PF01424.22 NODE_55404_length_311_cov_70.438406_g47469_i0reverse_frame_1 - 0.074 13.1 0.1 5.1 7.2 0.0 2.3 2 0 0 2 2 2 0 R3H domain Pik1 PF11522.8 NODE_55402_length_311_cov_72.887681_g47467_i0forward_frame_1 - 0.054 13.5 0.1 0.085 12.8 0.1 1.3 1 0 0 1 1 1 0 Yeast phosphatidylinositol-4-OH kinase Pik1 Pheromone PF08015.11 NODE_55401_length_311_cov_73.956522_g47466_i0forward_frame_1 - 1.3 10.1 7.5 2.1 9.5 7.5 1.5 1 1 0 1 1 1 0 Fungal mating-type pheromone zf-C2HCIx2C PF10782.9 NODE_55400_length_311_cov_74.891304_g47465_i0reverse_frame_1 - 0.018 15.0 0.1 0.047 13.6 0.1 1.7 1 0 0 1 1 1 0 Zinc-finger DUF5592 PF17332.2 NODE_55390_length_311_cov_95.231884_g47455_i0forward_frame_1 - 0.032 14.8 1.1 0.032 14.8 1.1 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5592) LSM PF01423.22 NODE_55382_length_311_cov_140.373188_g47447_i0reverse_frame_1 - 3.4e-16 58.7 1.1 5.1e-16 58.1 1.1 1.3 1 0 0 1 1 1 1 LSM domain DUF3932 PF13068.6 NODE_55370_length_311_cov_2048.931159_g47435_i0reverse_frame_1 - 0.095 13.0 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3932) Rrn6 PF10214.9 NODE_55370_length_311_cov_2048.931159_g47435_i0reverse_frame_1 - 0.88 8.0 7.2 1 7.8 7.2 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Adipogenin PF15202.6 NODE_55369_length_311_cov_2211.036232_g47434_i0reverse_frame_1 - 0.53 10.3 4.3 0.86 9.7 4.2 1.6 1 1 0 1 1 1 0 Adipogenin DUF3921 PF13060.6 NODE_55368_length_311_cov_2305.735507_g47433_i0reverse_frame_1 - 0.13 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3921) PG_binding_1 PF01471.18 NODE_55367_length_311_cov_5216.112319_g47432_i0forward_frame_1 - 0.17 12.1 0.0 0.26 11.5 0.0 1.3 1 0 0 1 1 1 0 Putative peptidoglycan binding domain 7TM-7TMR_HD PF07698.11 NODE_55359_length_312_cov_1.346570_g47424_i0reverse_frame_1 - 0.015 15.1 2.9 0.018 14.8 2.9 1.1 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase RabGAP-TBC PF00566.18 NODE_55353_length_312_cov_1.559567_g47418_i0reverse_frame_1 - 3.1e-11 43.4 3.4 3.8e-11 43.0 3.4 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF5432 PF17497.2 NODE_55347_length_312_cov_1.722022_g47412_i0reverse_frame_1 - 0.038 14.1 0.1 0.092 12.9 0.0 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5432) SUKH_6 PF14568.6 NODE_55337_length_312_cov_1.989170_g47402_i0reverse_frame_1 - 0.073 13.5 0.2 0.11 13.0 0.2 1.3 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall DUF4173 PF13777.6 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_1 - 0.018 14.5 0.5 0.026 13.9 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) COX_ARM PF06481.14 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_1 - 0.059 13.3 0.1 2.2 8.3 0.0 2.2 2 0 0 2 2 2 0 COX Aromatic Rich Motif CD47 PF04549.14 NODE_55330_length_312_cov_2.267148_g47395_i0forward_frame_1 - 0.71 10.1 8.0 1.5 9.0 2.5 2.1 2 0 0 2 2 2 0 CD47 transmembrane region Baculo_p24 PF05073.12 NODE_55330_length_312_cov_2.267148_g47395_i0forward_frame_1 - 1.8 8.3 5.3 2.2 8.1 5.3 1.3 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Herpes_US9 PF06072.11 NODE_55323_length_312_cov_2.967509_g47388_i0reverse_frame_1 - 0.96 9.4 3.8 1.9 8.4 0.1 2.2 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 Viral_DNA_bp PF00747.17 NODE_55320_length_312_cov_3.277978_g47385_i0forward_frame_1 - 0.037 11.2 0.3 0.046 10.9 0.3 1.0 1 0 0 1 1 1 0 ssDNA binding protein Cpta_toxin PF07254.12 NODE_55312_length_312_cov_11.823105_g47377_i0reverse_frame_1 - 0.32 11.0 3.6 0.39 10.7 3.6 1.1 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system Peptidase_S64 PF08192.11 NODE_55312_length_312_cov_11.823105_g47377_i0forward_frame_1 - 9.4 4.6 15.8 11 4.4 15.8 1.0 1 0 0 1 1 1 0 Peptidase family S64 DUF3488 PF11992.8 NODE_55311_length_312_cov_18.963899_g47376_i0forward_frame_1 - 2.4 7.0 10.0 2.9 6.8 10.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF3772 PF12607.8 NODE_55306_length_312_cov_57.718412_g47371_i0reverse_frame_1 - 0.038 13.7 0.1 0.038 13.7 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3772) zf-U1 PF06220.12 NODE_55303_length_312_cov_62.696751_g47368_i0forward_frame_1 - 0.004 16.9 0.4 0.0079 15.9 0.4 1.4 1 0 0 1 1 1 1 U1 zinc finger Keratin_B2_2 PF13885.6 NODE_55294_length_312_cov_83.418773_g47359_i0reverse_frame_1 - 6.6 6.8 18.1 45 4.1 18.1 2.1 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein DUF179 PF02622.15 NODE_55291_length_312_cov_101.375451_g47356_i0reverse_frame_1 - 0.00013 21.9 0.0 0.00016 21.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 YqgF PF14639.6 NODE_55287_length_312_cov_107.101083_g47352_i0forward_frame_1 - 0.093 12.5 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Holliday-junction resolvase-like of SPT6 DUF4200 PF13863.6 NODE_55285_length_312_cov_115.187726_g47350_i0forward_frame_1 - 5.2e-11 43.0 4.2 5.2e-11 43.0 4.2 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4200) DUF1515 PF07439.11 NODE_55285_length_312_cov_115.187726_g47350_i0forward_frame_1 - 0.017 15.2 1.6 0.024 14.6 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) DUF932 PF06067.11 NODE_55285_length_312_cov_115.187726_g47350_i0forward_frame_1 - 0.12 12.1 5.3 0.14 11.9 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF932) V_ATPase_I PF01496.19 NODE_55285_length_312_cov_115.187726_g47350_i0forward_frame_1 - 1.9 6.3 9.2 2 6.2 9.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family S1FA PF04689.13 NODE_55276_length_312_cov_226.162455_g47341_i0reverse_frame_1 - 0.011 15.8 0.7 0.011 15.8 0.7 1.5 2 0 0 2 2 2 0 DNA binding protein S1FA Orn_DAP_Arg_deC PF00278.22 NODE_55276_length_312_cov_226.162455_g47341_i0reverse_frame_1 - 0.035 14.3 0.1 0.045 14.0 0.1 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DUF2791 PF10923.8 NODE_55272_length_312_cov_339.566787_g47337_i0forward_frame_1 - 0.035 13.0 0.0 0.035 13.0 0.0 1.1 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) MscL PF01741.18 NODE_55263_length_313_cov_1.535971_g47329_i0reverse_frame_3 - 0.0051 17.1 0.8 0.0065 16.8 0.8 1.2 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL DUF3566 PF12089.8 NODE_55263_length_313_cov_1.535971_g47329_i0reverse_frame_3 - 0.019 15.3 0.6 0.02 15.2 0.1 1.3 2 0 0 2 2 2 0 Transmembrane domain of unknown function (DUF3566) YqgB PF11036.8 NODE_55263_length_313_cov_1.535971_g47329_i0reverse_frame_3 - 0.13 12.0 0.2 6.4 6.6 0.2 2.2 2 0 0 2 2 2 0 Virulence promoting factor bPH_4 PF06713.11 NODE_55253_length_313_cov_1.809353_g47319_i0reverse_frame_2 - 0.045 13.8 0.2 0.062 13.4 0.2 1.2 1 0 0 1 1 1 0 Bacterial PH domain Herpes_UL43 PF05072.13 NODE_55252_length_313_cov_1.924460_g47318_i0reverse_frame_3 - 0.0082 15.3 2.7 0.01 15.0 2.7 1.0 1 0 0 1 1 1 1 Herpesvirus UL43 protein 7TM_GPCR_Srab PF10292.9 NODE_55251_length_313_cov_1.949640_g47317_i0reverse_frame_2 - 0.0023 16.9 1.2 0.0025 16.8 1.2 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR receptor class ab chemoreceptor FYVE_2 PF02318.16 NODE_55246_length_313_cov_2.075540_g47312_i0forward_frame_2 - 0.054 13.7 3.8 0.84 9.9 1.4 2.1 1 1 1 2 2 2 0 FYVE-type zinc finger HTH_18 PF12833.7 NODE_55243_length_313_cov_2.165468_g47309_i0reverse_frame_3 - 1.2e-06 28.7 0.0 1.6e-06 28.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain YdiH PF15930.5 NODE_55243_length_313_cov_2.165468_g47309_i0reverse_frame_3 - 0.017 15.3 0.0 0.025 14.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function PepSY_2 PF13670.6 NODE_55238_length_313_cov_2.262590_g47304_i0reverse_frame_2 - 0.14 12.2 0.2 0.21 11.6 0.2 1.2 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain zf-HC5HC2H_2 PF13832.6 NODE_55237_length_313_cov_2.374101_g47303_i0reverse_frame_2 - 0.017 15.3 4.0 0.019 15.1 4.0 1.1 1 0 0 1 1 1 0 PHD-zinc-finger like domain DUF2207 PF09972.9 NODE_55233_length_313_cov_2.589928_g47299_i0reverse_frame_3 - 0.29 9.8 6.1 0.35 9.6 6.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CCDC53 PF10152.9 NODE_55233_length_313_cov_2.589928_g47299_i0reverse_frame_2 - 4.1 7.8 5.3 6.2 7.2 5.3 1.3 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex DUF1180 PF06679.12 NODE_55233_length_313_cov_2.589928_g47299_i0reverse_frame_2 - 5.3 7.4 12.1 7 7.0 12.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) DUF913 PF06025.12 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 0.15 11.0 6.3 0.15 11.0 6.3 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) SpoIIP PF07454.11 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 0.54 9.7 15.8 0.63 9.4 15.8 1.2 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) FAM60A PF15396.6 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 0.69 9.9 11.1 0.79 9.7 11.1 1.1 1 0 0 1 1 1 0 Protein Family FAM60A Connexin PF00029.19 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 0.74 9.5 10.0 0.87 9.3 10.0 1.2 1 0 0 1 1 1 0 Connexin Ureide_permease PF07168.11 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 1 8.1 5.7 1.1 7.9 5.7 1.0 1 0 0 1 1 1 0 Ureide permease DUF3464 PF11947.8 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 1.4 8.6 17.6 2.8 7.7 17.6 1.5 1 1 0 1 1 1 0 Photosynthesis affected mutant 68 NARP1 PF12569.8 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 1.4 7.7 16.7 1.6 7.5 16.7 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 DUF4746 PF15928.5 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 1.5 8.2 13.5 1.7 8.0 13.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) DDHD PF02862.17 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 1.5 8.9 13.3 1.7 8.7 13.3 1.1 1 0 0 1 1 1 0 DDHD domain FAM176 PF14851.6 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 1.9 8.1 13.8 2.4 7.8 13.8 1.1 1 0 0 1 1 1 0 FAM176 family Band_3_cyto PF07565.13 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 2 8.2 14.1 2.2 8.0 14.1 1.0 1 0 0 1 1 1 0 Band 3 cytoplasmic domain Tim54 PF11711.8 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 2.3 6.9 13.2 2.4 6.9 13.2 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Presenilin PF01080.17 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 2.5 6.8 20.6 2.6 6.7 20.6 1.0 1 0 0 1 1 1 0 Presenilin DUF2126 PF09899.9 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 3.2 5.7 9.7 3.5 5.6 9.7 1.0 1 0 0 1 1 1 0 Putative amidoligase enzyme (DUF2126) PepSY_TM PF03929.16 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 3.4 7.3 5.9 3.6 7.2 5.9 1.1 1 0 0 1 1 1 0 PepSY-associated TM region RR_TM4-6 PF06459.12 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 3.7 7.3 17.5 4 7.2 17.5 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 OATP PF03137.20 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 4.3 5.5 6.0 4.3 5.5 6.0 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Spt20 PF12090.8 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 5 6.7 41.3 8.4 5.9 41.3 1.3 1 0 0 1 1 1 0 Spt20 family DUF853 PF05872.12 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 5.1 5.6 11.5 5.6 5.4 11.5 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) CPSF100_C PF13299.6 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 6.8 6.8 13.6 8 6.6 13.6 1.1 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal PPL5 PF18168.1 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 9.6 5.4 11.8 11 5.3 11.8 1.1 1 0 0 1 1 1 0 Prim-pol family 5 CLN3 PF02487.17 NODE_55233_length_313_cov_2.589928_g47299_i0forward_frame_3 - 9.6 5.1 13.4 11 5.0 13.4 1.0 1 0 0 1 1 1 0 CLN3 protein PH_12 PF16457.5 NODE_55231_length_313_cov_2.737410_g47297_i0forward_frame_3 - 1.1e-06 29.2 0.0 1.4e-06 28.9 0.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain Porin_8 PF16966.5 NODE_55230_length_313_cov_2.827338_g47296_i0reverse_frame_2 - 3.7e-17 62.4 0.0 4.4e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 Porin-like glycoporin RafY Porin_4 PF13609.6 NODE_55230_length_313_cov_2.827338_g47296_i0reverse_frame_2 - 0.012 15.4 0.2 0.016 15.0 0.2 1.2 1 0 0 1 1 1 0 Gram-negative porin NMT PF01233.19 NODE_55227_length_313_cov_3.046763_g47293_i0forward_frame_3 - 0.16 11.8 1.5 0.19 11.5 1.3 1.3 1 1 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain DUF3320 PF11784.8 NODE_55226_length_313_cov_3.176259_g47292_i0forward_frame_2 - 1.3 9.0 3.6 19 5.3 1.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3320) GRDA PF04723.14 NODE_55224_length_313_cov_3.363309_g47290_i0reverse_frame_3 - 0.091 12.5 0.2 0.15 11.8 0.2 1.3 1 0 0 1 1 1 0 Glycine reductase complex selenoprotein A Peptidase_M50B PF13398.6 NODE_55221_length_313_cov_3.420863_g47287_i0reverse_frame_3 - 0.22 11.1 9.5 0.25 10.9 9.5 1.1 1 0 0 1 1 1 0 Peptidase M50B-like 2TM PF13239.6 NODE_55214_length_313_cov_22.543165_g47280_i0forward_frame_3 - 0.59 10.5 3.3 1.4 9.3 2.9 1.9 1 1 1 2 2 2 0 2TM domain DUF3533 PF12051.8 NODE_55212_length_313_cov_42.604317_g47278_i0reverse_frame_2 - 0.012 14.6 0.0 0.013 14.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) Terpene_synth_C PF03936.16 NODE_55212_length_313_cov_42.604317_g47278_i0reverse_frame_2 - 0.038 13.3 1.2 0.05 12.9 1.2 1.1 1 0 0 1 1 1 0 Terpene synthase family, metal binding domain Lipoprotein_2 PF00921.17 NODE_55212_length_313_cov_42.604317_g47278_i0reverse_frame_2 - 0.06 12.9 0.8 0.074 12.6 0.8 1.0 1 0 0 1 1 1 0 Borrelia lipoprotein DUF3222 PF11519.8 NODE_55208_length_313_cov_58.676259_g47274_i0forward_frame_3 - 0.037 14.3 0.7 0.051 13.8 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3222) ATP_sub_h PF10775.9 NODE_55207_length_313_cov_58.694245_g47273_i0reverse_frame_2 - 0.069 13.2 0.1 0.3 11.1 0.0 1.9 1 1 1 2 2 2 0 ATP synthase complex subunit h PH_10 PF15411.6 NODE_55205_length_313_cov_61.237410_g47271_i0forward_frame_2 - 0.21 11.8 4.7 0.28 11.5 4.7 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain PBP1_TM PF14812.6 NODE_55204_length_313_cov_61.377698_g47270_i0reverse_frame_2 - 0.18 12.2 4.2 0.21 12.0 4.2 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal RXT2_N PF08595.11 NODE_55204_length_313_cov_61.377698_g47270_i0reverse_frame_2 - 0.49 10.4 2.6 0.54 10.3 2.6 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal BESS PF02944.20 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 0.015 15.1 0.3 0.031 14.1 0.3 1.6 1 0 0 1 1 1 0 BESS motif PBP_sp32 PF07222.12 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 0.18 11.2 9.2 0.2 11.1 9.2 1.0 1 0 0 1 1 1 0 Proacrosin binding protein sp32 ARD PF03079.14 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 1.4 9.1 7.5 1.6 8.9 7.5 1.0 1 0 0 1 1 1 0 ARD/ARD' family FapA PF03961.13 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 2.4 6.7 11.9 2.9 6.4 11.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Presenilin PF01080.17 NODE_55201_length_313_cov_73.787770_g47267_i0forward_frame_2 - 6.3 5.4 4.9 6.8 5.3 4.9 1.0 1 0 0 1 1 1 0 Presenilin GPS PF01825.21 NODE_55198_length_313_cov_78.230216_g47264_i0reverse_frame_2 - 0.043 14.3 0.4 0.089 13.3 0.4 1.5 1 0 0 1 1 1 0 GPCR proteolysis site, GPS, motif FHA PF00498.26 NODE_55198_length_313_cov_78.230216_g47264_i0forward_frame_3 - 1.2e-11 44.7 0.0 1.5e-11 44.5 0.0 1.2 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_55198_length_313_cov_78.230216_g47264_i0forward_frame_3 - 1.4e-07 31.8 0.0 1.6e-07 31.6 0.0 1.1 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain PHD_Oberon PF07227.11 NODE_55195_length_313_cov_88.172662_g47261_i0forward_frame_3 - 0.0016 18.3 4.3 0.0017 18.2 4.3 1.1 1 0 0 1 1 1 1 PHD - plant homeodomain finger protein BNR PF02012.20 NODE_55194_length_313_cov_94.719424_g47260_i0reverse_frame_2 - 0.073 13.1 0.3 19 5.8 0.0 2.5 2 0 0 2 2 2 0 BNR/Asp-box repeat DUF2070 PF09843.9 NODE_55191_length_313_cov_101.269784_g47257_i0forward_frame_2 - 5.9 5.1 10.4 5.9 5.1 10.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PET117 PF15786.5 NODE_55186_length_313_cov_126.111511_g47252_i0forward_frame_3 - 0.1 12.9 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 PET assembly of cytochrome c oxidase, mitochondrial DUF3528 PF12045.8 NODE_55185_length_313_cov_130.820144_g47251_i0reverse_frame_2 - 0.026 15.2 0.1 0.029 15.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3528) Activin_recp PF01064.23 NODE_55182_length_313_cov_142.755396_g47248_i0forward_frame_3 - 0.053 14.6 3.5 0.066 14.3 3.5 1.1 1 0 0 1 1 1 0 Activin types I and II receptor domain TMF_TATA_bd PF12325.8 NODE_55181_length_313_cov_143.787770_g47247_i0forward_frame_2 - 0.016 15.4 6.7 0.023 14.9 6.7 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Spo7 PF03907.13 NODE_55181_length_313_cov_143.787770_g47247_i0forward_frame_2 - 0.021 14.3 3.8 0.024 14.1 3.8 1.1 1 0 0 1 1 1 0 Spo7-like protein DivIC PF04977.15 NODE_55181_length_313_cov_143.787770_g47247_i0forward_frame_2 - 1.9 8.3 10.0 6.6 6.6 8.5 2.2 1 1 0 1 1 1 0 Septum formation initiator Exonuc_VII_L PF02601.15 NODE_55181_length_313_cov_143.787770_g47247_i0forward_frame_2 - 2.9 7.4 8.6 3 7.3 8.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Abhydrolase_1 PF00561.20 NODE_55175_length_313_cov_197.651079_g47241_i0reverse_frame_2 - 0.014 15.1 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_55175_length_313_cov_197.651079_g47241_i0reverse_frame_2 - 0.053 12.8 0.0 0.063 12.5 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 FSH1 PF03959.13 NODE_55175_length_313_cov_197.651079_g47241_i0reverse_frame_2 - 0.072 12.7 0.0 0.082 12.6 0.0 1.1 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 NODE_55175_length_313_cov_197.651079_g47241_i0reverse_frame_2 - 0.12 12.5 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 TAP-like protein TetR_C_10 PF16295.5 NODE_55174_length_313_cov_202.543165_g47240_i0reverse_frame_2 - 0.00022 21.5 2.8 0.00028 21.2 2.8 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain UPF0731 PF14982.6 NODE_55173_length_313_cov_209.719424_g47239_i0reverse_frame_3 - 0.17 12.1 2.4 0.32 11.2 2.4 1.6 1 1 0 1 1 1 0 UPF0731 family FAM24 PF15193.6 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_2 - 0.034 14.9 2.4 9.8 7.0 0.1 3.0 3 0 0 3 3 3 0 FAM24 family DUF1639 PF07797.14 NODE_55172_length_313_cov_253.471223_g47238_i0reverse_frame_2 - 0.2 11.7 0.2 26 4.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1639) DUF3636 PF12331.8 NODE_55172_length_313_cov_253.471223_g47238_i0forward_frame_2 - 0.065 13.1 1.8 1.1 9.0 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3636) IFR3_antag PF14754.6 NODE_55170_length_313_cov_394.503597_g47236_i0forward_frame_3 - 0.07 12.3 0.5 0.086 12.0 0.5 1.1 1 0 0 1 1 1 0 Papain-like auto-proteinase Ctr PF04145.15 NODE_55169_length_313_cov_523.841727_g47235_i0reverse_frame_3 - 0.09 13.4 0.0 0.11 13.1 0.0 1.1 1 0 0 1 1 1 0 Ctr copper transporter family DUF4834 PF16118.5 NODE_55169_length_313_cov_523.841727_g47235_i0reverse_frame_3 - 0.12 13.4 0.0 0.13 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Csa1 PF06023.12 NODE_55167_length_314_cov_0.913978_g47233_i0forward_frame_2 - 0.011 15.1 0.0 0.014 14.8 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated exonuclease Csa1 MyTH4 PF00784.17 NODE_55161_length_314_cov_1.279570_g47227_i0forward_frame_3 - 0.044 14.3 0.2 0.078 13.5 0.2 1.4 1 0 0 1 1 1 0 MyTH4 domain DUF349 PF03993.12 NODE_55161_length_314_cov_1.279570_g47227_i0forward_frame_3 - 3.1 8.2 7.5 1.4 9.3 3.7 2.4 3 1 0 3 3 3 0 Domain of Unknown Function (DUF349) VRR_NUC PF08774.11 NODE_55157_length_314_cov_1.491039_g47223_i0forward_frame_3 - 0.049 13.7 0.0 0.059 13.5 0.0 1.1 1 0 0 1 1 1 0 VRR-NUC domain pXO2-72 PF17443.2 NODE_55153_length_314_cov_1.634409_g47219_i0reverse_frame_3 - 0.11 12.7 1.1 0.12 12.7 0.2 1.5 2 0 0 2 2 2 0 Uncharacterized protein pXO2-72 Capsid-VNN PF11729.8 NODE_55152_length_314_cov_1.655914_g47218_i0reverse_frame_2 - 0.21 10.6 0.0 0.25 10.3 0.0 1.1 1 0 0 1 1 1 0 nodavirus capsid protein HTH_49 PF18010.1 NODE_55151_length_314_cov_1.684588_g47217_i0reverse_frame_3 - 0.063 13.1 0.1 0.11 12.4 0.1 1.4 1 0 0 1 1 1 0 Cry35Ab1 HTH C-terminal domain COPI_assoc PF08507.10 NODE_55151_length_314_cov_1.684588_g47217_i0forward_frame_2 - 0.02 15.0 3.8 0.024 14.7 3.8 1.2 1 0 0 1 1 1 0 COPI associated protein LPD24 PF18839.1 NODE_55150_length_314_cov_1.706093_g47216_i0reverse_frame_3 - 0.087 13.1 0.2 0.15 12.3 0.2 1.5 1 1 0 1 1 1 0 Large polyvalent protein associated domain 24 Izumo-Ig PF16706.5 NODE_55149_length_314_cov_1.720430_g47215_i0forward_frame_2 - 0.14 12.2 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain APP_N PF02177.16 NODE_55148_length_314_cov_1.763441_g47214_i0reverse_frame_3 - 0.011 16.0 0.2 0.013 15.8 0.2 1.1 1 0 0 1 1 1 0 Amyloid A4 N-terminal heparin-binding Usp PF00582.26 NODE_55144_length_314_cov_1.989247_g47210_i0reverse_frame_3 - 2.4e-15 57.3 0.3 3e-15 57.0 0.3 1.1 1 0 0 1 1 1 1 Universal stress protein family DUF3530 PF12048.8 NODE_55144_length_314_cov_1.989247_g47210_i0forward_frame_3 - 0.18 11.2 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Thx PF17070.5 NODE_55144_length_314_cov_1.989247_g47210_i0forward_frame_3 - 6.3 7.1 8.1 0.27 11.4 1.5 2.0 2 0 0 2 2 2 0 30S ribosomal protein Thx TFIID-31kDa PF02291.15 NODE_55136_length_314_cov_2.186380_g47202_i0reverse_frame_3 - 2.6e-06 27.5 0.1 3.6e-06 27.1 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit DEFB136 PF17333.2 NODE_55136_length_314_cov_2.186380_g47202_i0forward_frame_2 - 1.3 9.0 4.9 0.96 9.4 1.2 2.3 2 0 0 2 2 2 0 Beta defensin 136 DUF5544 PF17698.1 NODE_55134_length_314_cov_2.433692_g47200_i0forward_frame_2 - 0.19 11.9 3.4 0.28 11.3 2.7 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5544) DUF1582 PF07621.11 NODE_55132_length_314_cov_2.523297_g47198_i0forward_frame_3 - 0.083 12.8 0.4 3.5 7.6 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1582) Tape_meas_lam_C PF09718.10 NODE_55131_length_314_cov_2.609319_g47197_i0reverse_frame_2 - 0.067 13.3 0.0 0.091 12.9 0.0 1.2 1 0 0 1 1 1 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) Methyltransf_30 PF05430.11 NODE_55125_length_314_cov_2.738351_g47191_i0forward_frame_3 - 0.007 16.2 0.0 0.0087 15.9 0.0 1.1 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase TypeIII_RM_meth PF12564.8 NODE_55124_length_314_cov_2.738351_g47190_i0reverse_frame_3 - 0.029 14.5 0.0 0.04 14.0 0.0 1.2 1 0 0 1 1 1 0 Type III restriction/modification enzyme methylation subunit YkuD_2 PF13645.6 NODE_55124_length_314_cov_2.738351_g47190_i0forward_frame_3 - 0.23 10.9 0.0 0.34 10.4 0.0 1.2 1 0 0 1 1 1 0 L,D-transpeptidase catalytic domain DSPc PF00782.20 NODE_55121_length_314_cov_2.910394_g47187_i0forward_frame_3 - 3.5e-06 26.9 0.9 5e-06 26.4 0.5 1.5 1 1 1 2 2 2 1 Dual specificity phosphatase, catalytic domain Ago_PAZ PF18309.1 NODE_55121_length_314_cov_2.910394_g47187_i0forward_frame_3 - 0.076 13.7 0.1 0.1 13.3 0.1 1.4 1 1 0 1 1 1 0 Argonaute PAZ domain DUF4105 PF13387.6 NODE_55120_length_314_cov_2.956989_g47186_i0forward_frame_2 - 0.095 12.3 0.4 0.12 12.0 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4105) DUF5058 PF16481.5 NODE_55118_length_314_cov_3.236559_g47184_i0forward_frame_3 - 0.007 16.1 0.8 0.0077 15.9 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5058) DUF424 PF04242.13 NODE_55117_length_314_cov_3.415771_g47183_i0forward_frame_3 - 0.031 14.6 0.3 0.047 14.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF424) TetR_N PF00440.23 NODE_55115_length_314_cov_3.516129_g47181_i0reverse_frame_3 - 1.2e-15 57.0 0.1 1.6e-15 56.6 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family LacI PF00356.21 NODE_55115_length_314_cov_3.516129_g47181_i0reverse_frame_3 - 0.12 12.2 0.1 0.55 10.1 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family RSN1_TM PF13967.6 NODE_55113_length_314_cov_3.691756_g47179_i0forward_frame_3 - 0.091 12.5 1.4 0.11 12.2 1.4 1.2 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport Calx-beta PF03160.14 NODE_55109_length_314_cov_7.021505_g47175_i0reverse_frame_2 - 0.016 15.4 0.0 0.023 14.9 0.0 1.2 1 0 0 1 1 1 0 Calx-beta domain SCRG1 PF15224.6 NODE_55108_length_314_cov_9.681004_g47174_i0reverse_frame_3 - 0.071 13.2 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Scrapie-responsive protein 1 Oxysterol_BP PF01237.18 NODE_55103_length_314_cov_59.129032_g47169_i0forward_frame_2 - 2.9e-19 69.1 5.3 3.6e-19 68.8 5.3 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Drc1-Sld2 PF11719.8 NODE_55101_length_314_cov_63.831541_g47167_i0forward_frame_2 - 0.2 11.2 15.2 0.21 11.1 15.2 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein DUF1676 PF07898.13 NODE_55101_length_314_cov_63.831541_g47167_i0forward_frame_2 - 5.2 7.1 9.4 6.3 6.8 9.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) Ribosomal_60s PF00428.19 NODE_55099_length_314_cov_66.516129_g47165_i0reverse_frame_3 - 1.2e-12 48.2 2.1 1.5e-12 48.0 2.1 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein HD PF01966.22 NODE_55099_length_314_cov_66.516129_g47165_i0reverse_frame_3 - 0.05 13.8 0.0 0.069 13.4 0.0 1.3 1 0 0 1 1 1 0 HD domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks255.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks255.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks255.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks255.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3408 PF11888.8 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_3 - 8.1 6.6 10.3 9.9 6.3 10.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) SelK_SelG PF10961.8 NODE_55097_length_314_cov_69.347670_g47163_i0forward_frame_2 - 0.063 13.9 2.3 0.084 13.5 2.3 1.1 1 0 0 1 1 1 0 Selenoprotein SelK_SelG GPP34 PF05719.11 NODE_55096_length_314_cov_69.652330_g47162_i0reverse_frame_2 - 0.031 14.3 0.2 0.039 14.0 0.2 1.2 1 0 0 1 1 1 0 Golgi phosphoprotein 3 (GPP34) Rrn6 PF10214.9 NODE_55096_length_314_cov_69.652330_g47162_i0reverse_frame_2 - 2.4 6.5 8.2 2.4 6.6 8.2 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF659 PF04937.15 NODE_55095_length_314_cov_70.827957_g47161_i0forward_frame_3 - 0.031 14.2 0.2 0.041 13.7 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF 659) DUF261 PF03196.13 NODE_55094_length_314_cov_71.032258_g47160_i0reverse_frame_3 - 0.0021 18.2 3.6 0.0024 18.0 3.6 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF261 Corona_M PF01635.18 NODE_55094_length_314_cov_71.032258_g47160_i0forward_frame_2 - 2.3 7.5 12.2 2.8 7.2 12.2 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein DUF4789 PF16033.5 NODE_55092_length_314_cov_74.311828_g47158_i0forward_frame_3 - 0.0033 17.9 2.5 0.0045 17.5 2.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4789) Ank_2 PF12796.7 NODE_55091_length_314_cov_74.792115_g47157_i0reverse_frame_3 - 6.4e-05 23.5 0.0 0.00023 21.7 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_55091_length_314_cov_74.792115_g47157_i0reverse_frame_3 - 0.00027 21.2 0.0 0.0004 20.6 0.0 1.3 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_55091_length_314_cov_74.792115_g47157_i0reverse_frame_3 - 0.0073 16.7 0.0 0.023 15.2 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 NODE_55091_length_314_cov_74.792115_g47157_i0reverse_frame_3 - 0.018 15.5 0.1 0.056 13.9 0.1 1.8 2 0 0 2 2 2 0 Ankyrin repeat Myosin_head PF00063.21 NODE_55085_length_314_cov_86.985663_g47151_i0reverse_frame_2 - 1.7e-18 66.2 0.0 1.9e-18 66.1 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) Cytokin_check_N PF10407.9 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_3 - 0.072 13.1 0.2 0.13 12.3 0.2 1.4 1 0 0 1 1 1 0 Cdc14 phosphatase binding protein N-terminus DUF5305 PF17231.2 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 0.0094 15.4 0.1 0.011 15.2 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5305) FeoB_associated PF12669.7 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 0.057 13.8 0.3 0.057 13.8 0.3 2.2 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein Baculo_11_kDa PF06143.11 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 0.061 12.9 3.1 0.091 12.3 3.1 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family Polyoma_coat PF00718.20 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 0.09 12.0 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Polyomavirus coat protein Syndecan PF01034.20 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 0.1 12.5 0.1 0.19 11.7 0.1 1.4 1 0 0 1 1 1 0 Syndecan domain CTV_P6 PF06706.11 NODE_55081_length_314_cov_102.401434_g47147_i0forward_frame_2 - 5.2 6.9 7.8 4.3 7.1 6.1 1.7 1 1 1 2 2 2 0 Citrus tristeza virus 6-kDa protein DHC PF09626.10 NODE_55079_length_314_cov_122.293907_g47145_i0forward_frame_2 - 0.019 15.8 0.2 0.025 15.5 0.2 1.1 1 0 0 1 1 1 0 Dihaem cytochrome c DUF2644 PF10841.8 NODE_55076_length_314_cov_192.770609_g47142_i0reverse_frame_2 - 0.35 11.1 1.0 0.5 10.6 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) DUF4910 PF16254.5 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 0.0031 16.4 0.1 1.3 7.8 0.0 2.9 1 1 2 3 3 3 2 Domain of unknown function (DUF4910) DUF3953 PF13129.6 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 0.022 14.5 0.9 1.4 8.8 0.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3953) DUF4723 PF15851.5 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 0.082 13.1 1.6 4.5 7.5 0.2 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4723) DUF4024 PF13216.6 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 0.095 12.6 4.5 25 4.9 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF4024) tRNA_bind_2 PF13725.6 NODE_55073_length_314_cov_287.329749_g47139_i0reverse_frame_2 - 6.8 6.3 6.8 36 3.9 0.1 3.0 3 0 0 3 3 3 0 Possible tRNA binding domain Alginate_exp PF13372.6 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_3 - 0.2 10.3 0.1 4.7 5.8 0.0 2.0 2 0 0 2 2 2 0 Alginate export Ank_2 PF12796.7 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 6.7e-24 84.3 0.8 6.5e-13 49.1 0.2 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 3.5e-14 51.5 0.1 0.0017 18.7 0.0 3.5 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 8.2e-13 48.6 0.0 9.3e-07 29.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 7.6e-11 42.0 0.1 0.027 14.8 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 1.7e-09 37.7 0.0 0.11 13.0 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat DUF2170 PF09938.9 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 0.07 12.8 0.0 11 5.7 0.0 2.7 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2170) Cyclin_N PF00134.23 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 0.1 12.3 0.0 17 5.2 0.0 2.8 1 1 2 3 3 3 0 Cyclin, N-terminal domain Involucrin PF00904.17 NODE_55073_length_314_cov_287.329749_g47139_i0forward_frame_2 - 9.9 7.3 6.2 70 4.7 0.4 3.2 3 0 0 3 3 3 0 Involucrin repeat Jiv90 PF14901.6 NODE_55072_length_314_cov_479.684588_g47138_i0reverse_frame_3 - 0.048 13.8 2.6 0.27 11.4 2.6 1.9 1 1 0 1 1 1 0 Cleavage inducing molecular chaperone Crust_neurohorm PF01147.17 NODE_55072_length_314_cov_479.684588_g47138_i0reverse_frame_3 - 0.075 12.9 1.4 0.16 11.8 1.4 1.5 1 1 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family 2OG-FeII_Oxy_3 PF13640.6 NODE_55072_length_314_cov_479.684588_g47138_i0forward_frame_2 - 0.12 13.3 0.0 0.38 11.7 0.0 1.7 2 0 0 2 2 2 0 2OG-Fe(II) oxygenase superfamily zf-C5HC2 PF02928.16 NODE_55071_length_314_cov_1119.318996_g47137_i0reverse_frame_3 - 5.6e-06 26.7 18.5 8.2e-06 26.1 18.5 1.3 1 0 0 1 1 1 1 C5HC2 zinc finger TMEM52 PF14979.6 NODE_55071_length_314_cov_1119.318996_g47137_i0reverse_frame_2 - 0.0076 16.2 1.3 0.0096 15.8 1.3 1.1 1 0 0 1 1 1 1 Transmembrane 52 zf-3CxxC PF13695.6 NODE_55066_length_315_cov_1.178571_g47132_i0reverse_frame_2 - 0.011 16.2 0.4 0.015 15.8 0.4 1.2 1 0 0 1 1 1 0 Zinc-binding domain B_solenoid_dext PF18841.1 NODE_55063_length_315_cov_1.360714_g47129_i0forward_frame_3 - 0.085 13.2 0.2 0.16 12.3 0.2 1.4 1 0 0 1 1 1 0 Beta solenoid repeat from Dextranase DevR PF01905.16 NODE_55063_length_315_cov_1.360714_g47129_i0forward_frame_3 - 0.14 11.2 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 CRISPR-associated negative auto-regulator DevR/Csa2 McrBC PF10117.9 NODE_55059_length_315_cov_1.450000_g47125_i0reverse_frame_2 - 0.015 14.5 0.6 0.015 14.4 0.6 1.0 1 0 0 1 1 1 0 McrBC 5-methylcytosine restriction system component TSC22 PF01166.18 NODE_55059_length_315_cov_1.450000_g47125_i0reverse_frame_2 - 0.024 14.9 0.2 0.058 13.7 0.2 1.7 1 0 0 1 1 1 0 TSC-22/dip/bun family CLZ PF16526.5 NODE_55059_length_315_cov_1.450000_g47125_i0reverse_frame_2 - 0.028 14.8 1.0 0.13 12.7 0.1 2.0 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Csm1_N PF18504.1 NODE_55059_length_315_cov_1.450000_g47125_i0reverse_frame_2 - 0.057 13.8 0.3 0.1 13.0 0.3 1.4 1 0 0 1 1 1 0 Csm1 N-terminal domain CcmD PF04995.14 NODE_55055_length_315_cov_1.582143_g47121_i0reverse_frame_2 - 1.2 9.3 3.3 2.5 8.3 3.3 1.6 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Actino_peptide PF14408.6 NODE_55050_length_315_cov_1.728571_g47116_i0reverse_frame_2 - 0.054 13.6 0.0 0.09 12.9 0.0 1.4 1 0 0 1 1 1 0 Ribosomally synthesised peptide in actinomycetes SHR3_chaperone PF08229.11 NODE_55050_length_315_cov_1.728571_g47116_i0reverse_frame_2 - 0.067 12.2 0.1 0.071 12.1 0.1 1.1 1 0 0 1 1 1 0 ER membrane protein SH3 CsoS2_M PF12288.8 NODE_55050_length_315_cov_1.728571_g47116_i0reverse_frame_2 - 0.86 8.9 6.8 0.96 8.8 6.8 1.0 1 0 0 1 1 1 0 Carboxysome shell peptide mid-region RPOL_N PF14700.6 NODE_55039_length_315_cov_2.185714_g47105_i0forward_frame_2 - 8.3e-05 22.1 1.2 9.7e-05 21.9 1.2 1.1 1 0 0 1 1 1 1 DNA-directed RNA polymerase N-terminal DUF4919 PF16266.5 NODE_55039_length_315_cov_2.185714_g47105_i0forward_frame_2 - 0.0032 17.4 0.0 0.0035 17.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4919) BALF1 PF06861.11 NODE_55036_length_315_cov_2.307143_g47102_i0forward_frame_3 - 0.13 11.9 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 BALF1 protein DUF1445 PF07286.12 NODE_55036_length_315_cov_2.307143_g47102_i0forward_frame_2 - 0.07 13.1 0.0 0.08 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1445) Peptidase_M20 PF01546.28 NODE_55033_length_315_cov_2.325000_g47099_i0reverse_frame_3 - 4e-07 29.9 0.0 4.6e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 NODE_55033_length_315_cov_2.325000_g47099_i0reverse_frame_3 - 0.026 14.2 0.0 0.028 14.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M28 AAA_lid_2 PF17863.1 NODE_55033_length_315_cov_2.325000_g47099_i0forward_frame_2 - 0.045 13.6 0.1 0.1 12.4 0.1 1.6 1 0 0 1 1 1 0 AAA lid domain DUF2957 PF11170.8 NODE_55031_length_315_cov_2.342857_g47097_i0forward_frame_2 - 2 7.2 9.5 0.3 9.9 4.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2957) NADH_4Fe-4S PF10589.9 NODE_55028_length_315_cov_2.432143_g47094_i0forward_frame_3 - 0.042 13.9 0.1 0.087 12.9 0.1 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GM_CSF PF01109.17 NODE_55028_length_315_cov_2.432143_g47094_i0forward_frame_3 - 0.095 12.9 0.1 0.37 10.9 0.0 1.8 1 1 1 2 2 2 0 Granulocyte-macrophage colony-stimulating factor PLDc_2 PF13091.6 NODE_55027_length_315_cov_2.442857_g47093_i0forward_frame_3 - 0.015 15.2 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 PLD-like domain DUF4764 PF15961.5 NODE_55026_length_315_cov_2.446429_g47092_i0forward_frame_3 - 0.47 9.1 1.6 0.5 9.0 1.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4764) DUF1819 PF08849.11 NODE_55025_length_315_cov_2.542857_g47091_i0reverse_frame_2 - 0.066 13.0 0.0 0.078 12.8 0.0 1.1 1 0 0 1 1 1 0 Putative inner membrane protein (DUF1819) Cortexin PF11057.8 NODE_55024_length_315_cov_2.603571_g47090_i0forward_frame_3 - 0.17 11.8 2.5 0.27 11.1 2.5 1.4 1 0 0 1 1 1 0 Cortexin of kidney Xan_ur_permease PF00860.20 NODE_55023_length_315_cov_2.625000_g47089_i0reverse_frame_3 - 4.8e-10 38.7 1.5 5.6e-10 38.5 1.5 1.1 1 0 0 1 1 1 1 Permease family Imm9 PF15587.6 NODE_55018_length_315_cov_3.614286_g47084_i0reverse_frame_2 - 0.0025 17.5 1.7 0.0029 17.3 1.7 1.1 1 0 0 1 1 1 1 Immunity protein 9 Herpes_LMP1 PF05297.11 NODE_55016_length_315_cov_4.771429_g47082_i0forward_frame_3 - 0.36 10.0 3.4 0.39 9.9 3.4 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Ribosomal_S12 PF17487.2 NODE_55016_length_315_cov_4.771429_g47082_i0forward_frame_3 - 0.44 11.3 6.5 0.12 13.1 1.7 1.9 1 1 1 2 2 2 0 Ribosomal protein S12 DHBP_synthase PF00926.19 NODE_55016_length_315_cov_4.771429_g47082_i0forward_frame_2 - 1.4e-41 142.1 0.1 1.6e-41 142.0 0.1 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase YrvL PF14184.6 NODE_55015_length_315_cov_7.596429_g47081_i0reverse_frame_3 - 0.0046 17.1 0.9 0.0054 16.8 0.9 1.1 1 0 0 1 1 1 1 Regulatory protein YrvL DUF4468 PF14730.6 NODE_55014_length_315_cov_22.625000_g47080_i0reverse_frame_2 - 0.037 14.3 0.2 0.046 14.0 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold Transpos_assoc PF13963.6 NODE_55012_length_315_cov_38.060714_g47078_i0forward_frame_2 - 0.14 12.5 0.9 0.2 12.0 0.9 1.3 1 0 0 1 1 1 0 Transposase-associated domain SelB-wing_1 PF09105.10 NODE_55006_length_315_cov_55.046429_g47072_i0reverse_frame_2 - 0.13 12.2 0.2 0.27 11.2 0.0 1.6 2 0 0 2 2 2 0 Elongation factor SelB, winged helix SET PF00856.28 NODE_55005_length_315_cov_56.214286_g47071_i0reverse_frame_3 - 0.00032 21.1 0.0 0.00038 20.9 0.0 1.1 1 0 0 1 1 1 1 SET domain BRCC36_C PF18110.1 NODE_55003_length_315_cov_59.567857_g47069_i0reverse_frame_3 - 0.074 13.2 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 BRCC36 C-terminal helical domain DUF1654 PF07867.11 NODE_55001_length_315_cov_63.421429_g47067_i0forward_frame_2 - 0.059 13.1 0.0 0.089 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1654) Sel_put PF04328.13 NODE_54996_length_315_cov_68.350000_g47062_i0forward_frame_3 - 0.036 14.1 0.0 0.062 13.3 0.0 1.4 1 0 0 1 1 1 0 Selenoprotein, putative PPR_2 PF13041.6 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 5.5e-10 39.3 0.0 3.8e-07 30.2 0.0 2.5 2 1 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 5.9e-09 35.9 0.0 1.4e-06 28.3 0.0 2.1 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 4e-07 29.6 0.1 0.1 12.3 0.0 3.7 3 1 0 3 3 3 2 PPR repeat PPR PF01535.20 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 3e-06 27.1 1.8 0.089 13.1 0.0 3.3 3 1 0 3 3 3 2 PPR repeat PPR_long PF17177.4 NODE_54995_length_315_cov_71.592857_g47061_i0reverse_frame_3 - 0.014 14.8 0.0 0.022 14.2 0.0 1.4 1 1 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP F-box-like PF12937.7 NODE_54994_length_315_cov_73.400000_g47060_i0reverse_frame_3 - 0.66 9.9 4.8 1.2 9.1 4.8 1.5 1 0 0 1 1 1 0 F-box-like DUF3464 PF11947.8 NODE_54994_length_315_cov_73.400000_g47060_i0reverse_frame_2 - 0.011 15.5 0.8 0.02 14.6 0.0 1.7 1 1 1 2 2 2 0 Photosynthesis affected mutant 68 Toxin_7 PF05980.12 NODE_54993_length_315_cov_73.503571_g47059_i0reverse_frame_2 - 0.033 14.4 2.3 0.033 14.4 2.3 1.8 2 0 0 2 2 2 0 Toxin 7 DUF4865 PF16157.5 NODE_54993_length_315_cov_73.503571_g47059_i0forward_frame_2 - 0.12 12.3 0.1 0.15 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4865) DUF3852 PF12963.7 NODE_54988_length_315_cov_87.942857_g47054_i0reverse_frame_2 - 0.0089 16.4 0.1 0.013 15.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3852) CHORD PF04968.12 NODE_54985_length_315_cov_109.385714_g47051_i0reverse_frame_3 - 0.016 15.9 0.3 0.024 15.3 0.3 1.3 1 0 0 1 1 1 0 CHORD DUF2135 PF09906.9 NODE_54985_length_315_cov_109.385714_g47051_i0forward_frame_2 - 0.15 12.4 0.2 0.35 11.2 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2135) Defensin_beta_2 PF13841.6 NODE_54980_length_315_cov_135.346429_g47046_i0reverse_frame_2 - 0.027 14.9 0.2 0.04 14.4 0.2 1.2 1 0 0 1 1 1 0 Beta defensin Nodulin_late PF07127.11 NODE_54978_length_315_cov_142.960714_g47044_i0forward_frame_2 - 0.025 14.9 0.3 0.035 14.5 0.3 1.2 1 0 0 1 1 1 0 Late nodulin protein TILa PF12714.7 NODE_54974_length_315_cov_224.817857_g47040_i0reverse_frame_3 - 0.015 15.3 0.2 0.026 14.5 0.2 1.5 1 0 0 1 1 1 0 TILa domain Colipase_C PF02740.14 NODE_54974_length_315_cov_224.817857_g47040_i0reverse_frame_3 - 0.14 12.3 1.2 0.4 10.9 0.1 2.0 2 0 0 2 2 2 0 Colipase, C-terminal domain CEBP_ZZ PF16366.5 NODE_54974_length_315_cov_224.817857_g47040_i0forward_frame_3 - 0.085 13.1 1.2 0.085 13.1 1.2 1.7 2 0 0 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Pro_isomerase PF00160.21 NODE_54973_length_315_cov_979.989286_g42158_i3forward_frame_3 - 0.039 14.2 0.0 0.044 14.1 0.0 1.1 1 0 0 1 1 1 0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Melittin PF01372.17 NODE_54972_length_315_cov_1813.864286_g47039_i0forward_frame_2 - 4.1 7.5 5.5 12 6.0 0.5 2.6 2 0 0 2 2 2 0 Melittin Nucleoporin_FG PF13634.6 NODE_54971_length_315_cov_2752.282143_g47038_i0reverse_frame_2 - 0.25 12.2 19.5 2.8 8.9 19.5 2.0 1 1 0 1 1 1 0 Nucleoporin FG repeat region SBF_like PF13593.6 NODE_54971_length_315_cov_2752.282143_g47038_i0reverse_frame_2 - 0.37 10.1 1.4 12 5.1 0.1 2.0 1 1 1 2 2 2 0 SBF-like CPA transporter family (DUF4137) FGGY_N PF00370.21 NODE_54971_length_315_cov_2752.282143_g47038_i0forward_frame_2 - 0.0008 19.0 1.5 0.53 9.8 0.1 2.0 2 0 0 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain TPK_B1_binding PF04265.14 NODE_54971_length_315_cov_2752.282143_g47038_i0forward_frame_2 - 0.0029 17.3 0.0 0.45 10.3 0.0 2.2 2 0 0 2 2 2 2 Thiamin pyrophosphokinase, vitamin B1 binding domain COX17 PF05051.13 NODE_54971_length_315_cov_2752.282143_g47038_i0forward_frame_2 - 0.076 13.4 0.0 18 5.7 0.0 2.3 2 0 0 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) zf-nanos PF05741.13 NODE_54971_length_315_cov_2752.282143_g47038_i0forward_frame_2 - 0.52 10.6 6.0 11 6.4 0.3 2.6 2 1 0 2 2 2 0 Nanos RNA binding domain CRCB PF02537.15 ORF99803 - 6.7e-20 71.2 5.3 8.1e-20 70.9 5.3 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) Vir_act_alpha_C PF10400.9 ORF99479 - 0.083 13.6 0.2 0.13 13.0 0.2 1.3 1 0 0 1 1 1 0 Virulence activator alpha C-term HD_3 PF13023.6 ORF99455 - 0.21 11.5 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 HD domain PsaN PF05479.11 ORF98392 - 0.15 12.3 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Photosystem I reaction centre subunit N (PSAN or PSI-N) DUF656 PF04920.12 ORF97872 - 0.063 13.2 0.4 0.071 13.0 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF656) Sugar_tr PF00083.24 ORF97399 - 1.8e-12 46.9 11.8 1.9e-12 46.8 11.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DNase-RNase PF02577.14 ORF96795 - 0.0043 16.7 0.4 0.0049 16.5 0.4 1.1 1 0 0 1 1 1 1 Bifunctional nuclease ECH_1 PF00378.20 ORF96512 - 2.8e-26 92.4 0.0 3e-26 92.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF96512 - 0.0091 15.5 0.0 0.0091 15.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Plectin PF00681.20 ORF96512 - 0.023 14.6 0.0 2.8 7.9 0.0 2.4 2 0 0 2 2 2 0 Plectin repeat Thionin PF00321.17 ORF96488 - 4.6 7.8 8.2 4 8.0 0.2 3.0 3 0 0 3 3 3 0 Plant thionin Dermcidin PF15291.6 ORF9622 - 0.11 13.0 0.0 0.13 12.8 0.0 1.1 1 0 0 1 1 1 0 Dermcidin, antibiotic peptide zf-RRN7 PF11781.8 ORF95886 - 0.0068 16.1 1.0 0.0068 16.1 1.0 2.2 3 0 0 3 3 3 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF948 PF06103.11 ORF94532 - 0.0071 16.6 0.5 0.016 15.5 0.5 1.7 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Not3 PF04065.15 ORF94532 - 0.0082 15.6 5.6 0.009 15.5 5.6 1.0 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component NPV_P10 PF05531.12 ORF94532 - 0.012 16.1 1.2 0.19 12.2 0.2 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein COG2 PF06148.11 ORF94532 - 0.016 15.3 3.7 0.023 14.8 3.7 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 SH3BP5 PF05276.14 ORF94532 - 0.036 13.9 5.9 0.55 10.0 1.6 2.0 1 1 1 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) PEP-utilisers_N PF05524.13 ORF94532 - 0.051 13.7 1.5 0.063 13.4 1.5 1.1 1 0 0 1 1 1 0 PEP-utilising enzyme, N-terminal TraC PF07820.12 ORF94532 - 0.19 12.1 3.1 4.5 7.7 2.1 2.1 1 1 1 2 2 2 0 TraC-like protein TolA_bind_tri PF16331.5 ORF94532 - 0.19 11.8 3.7 0.25 11.4 0.4 2.4 2 1 0 2 2 2 0 TolA binding protein trimerisation KapB PF08810.10 ORF94532 - 0.33 11.1 2.3 3 8.1 1.9 2.5 2 1 0 2 2 2 0 Kinase associated protein B TIL PF01826.17 ORF93937 - 0.55 10.5 8.2 0.22 11.8 4.5 1.9 2 0 0 2 2 2 0 Trypsin Inhibitor like cysteine rich domain KH_1 PF00013.29 ORF93333 - 0.013 15.3 0.0 4.4 7.2 0.0 2.2 2 0 0 2 2 2 0 KH domain DUF126 PF01989.16 ORF91442 - 0.095 12.5 0.0 0.95 9.3 0.0 2.1 2 1 0 2 2 2 0 Aconitase X swivel domain DUF3678 PF12435.8 ORF90599 - 0.081 12.3 1.7 0.2 11.0 1.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) DUF1129 PF06570.11 ORF89812 - 0.072 12.6 0.1 0.095 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) SARS_X4 PF08779.10 ORF88466 - 0.19 11.9 0.3 0.32 11.2 0.3 1.3 1 0 0 1 1 1 0 SARS coronavirus X4 like SSB PF00436.25 ORF88055 - 3.9e-13 49.3 0.0 4.2e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 Single-strand binding protein family ESP PF16590.5 ORF88029 - 0.018 15.3 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Exocrine gland-secreting peptide ENT PF03735.14 ORF86804 - 0.11 12.5 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 ENT domain BLUF PF04940.12 ORF86784 - 0.014 15.5 0.6 0.024 14.8 0.3 1.5 1 1 0 1 1 1 0 Sensors of blue-light using FAD SLBP_RNA_bind PF15247.6 ORF86784 - 0.07 13.3 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain TcdA_TcdB PF12919.7 ORF86784 - 6 6.1 15.0 6.3 6.0 15.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB catalytic glycosyltransferase domain DUF4140 PF13600.6 ORF86784 - 6.4 7.3 8.3 2.8 8.4 5.3 1.8 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Halogen_Hydrol PF10112.9 ORF86211 - 9.7 6.2 7.2 12 5.8 7.0 1.4 1 1 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein rhaM PF05336.13 ORF85085 - 8.6e-29 99.8 1.4 9.5e-29 99.6 1.4 1.0 1 0 0 1 1 1 1 L-rhamnose mutarotase Dimer_Tnp_hAT PF05699.14 ORF84661 - 0.016 15.0 0.1 0.025 14.4 0.1 1.4 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region Closter_coat PF01785.17 ORF84126 - 0.0058 15.9 0.3 0.0076 15.5 0.3 1.1 1 0 0 1 1 1 1 Closterovirus coat protein NUDE_C PF04880.13 ORF84126 - 0.035 14.6 0.3 0.039 14.4 0.3 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region PAH PF02671.21 ORF83998 - 0.053 13.7 0.2 0.1 12.7 0.2 1.5 1 0 0 1 1 1 0 Paired amphipathic helix repeat Synaptobrevin PF00957.21 ORF83314 - 0.027 14.3 0.4 0.046 13.5 0.4 1.4 1 0 0 1 1 1 0 Synaptobrevin TTL PF03133.15 ORF82650 - 5.4e-30 104.5 1.0 5.6e-30 104.5 1.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF82650 - 0.1 11.8 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 YheC/D like ATP-grasp RNase_PH_C PF03725.15 ORF82018 - 2 8.5 5.6 7.2 6.7 0.8 3.1 1 1 1 2 2 2 0 3' exoribonuclease family, domain 2 DUF621 PF04789.15 ORF81402 - 0.066 12.4 0.3 0.078 12.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF621) HSP90 PF00183.18 ORF80203 - 0.14 11.1 0.1 0.17 10.8 0.1 1.0 1 0 0 1 1 1 0 Hsp90 protein LAMTOR5 PF16672.5 ORF79777 - 0.025 14.5 0.0 0.03 14.2 0.0 1.3 1 1 0 1 1 1 0 Ragulator complex protein LAMTOR5 SPG48 PF14764.6 ORF79657 - 0.057 13.9 0.2 0.073 13.5 0.2 1.1 1 0 0 1 1 1 0 AP-5 complex subunit, vesicle trafficking TMEM220 PF15071.6 ORF79366 - 0.00037 21.2 0.1 0.00044 21.0 0.1 1.1 1 0 0 1 1 1 1 Transmembrane family 220, helix NADH-u_ox-rdase PF10785.9 ORF79366 - 0.00085 20.0 1.6 0.001 19.7 1.6 1.1 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit DUF4680 PF15730.5 ORF7905 - 0.2 12.0 4.1 0.27 11.6 4.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4680) LAMTOR5 PF16672.5 ORF78367 - 0.025 14.5 0.0 0.03 14.2 0.0 1.3 1 1 0 1 1 1 0 Ragulator complex protein LAMTOR5 DUF1820 PF08850.11 ORF78049 - 0.044 14.3 0.1 0.076 13.5 0.0 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1820) Mito_carr PF00153.27 ORF76790 - 1.3e-13 50.7 0.1 1.5e-13 50.5 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein Nairovirus_M PF07948.11 ORF75854 - 0.1 10.8 0.0 0.12 10.5 0.0 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like CMV_US PF08001.11 ORF75521 - 0.087 12.1 0.7 0.16 11.2 0.4 1.6 1 1 1 2 2 2 0 CMV US DAG1 PF05454.11 ORF75521 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) ACR_tran PF00873.19 ORF73703 - 2.4e-17 62.0 1.0 2.6e-17 61.9 1.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family F_actin_bund_C PF18060.1 ORF72590 - 0.069 13.3 0.1 0.087 13.0 0.1 1.1 1 0 0 1 1 1 0 F actin bundling C terminal Kdo PF06293.14 ORF71036 - 0.2 11.0 4.0 0.26 10.6 4.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Transport_MerF PF11431.8 ORF70260 - 0.0094 15.8 0.9 0.1 12.5 0.1 2.2 2 0 0 2 2 2 1 Membrane transport protein MerF ThiF PF00899.21 ORF69971 - 0.099 12.0 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 ThiF family EF-hand_1 PF00036.32 ORF69654 - 1.7e-19 67.8 9.7 2.4e-07 29.8 1.7 3.3 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF69654 - 2.7e-14 51.8 7.0 1.6e-06 27.6 0.9 3.3 3 0 0 3 3 3 3 EF-hand domain EF-hand_7 PF13499.6 ORF69654 - 3.5e-13 49.8 5.9 4e-09 36.8 3.7 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF69654 - 8.7e-13 47.9 5.5 0.00051 19.8 0.1 3.1 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF69654 - 2.1e-11 42.7 7.8 6e-06 25.5 2.0 3.3 3 0 0 3 3 3 3 EF hand SPARC_Ca_bdg PF10591.9 ORF69654 - 0.028 14.7 1.3 0.21 11.9 0.8 2.0 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF69654 - 0.054 13.5 5.1 6.3 6.8 0.3 3.0 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 ORF69654 - 0.14 12.3 2.7 8.1 6.7 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2666) DUF4157 PF13699.6 ORF6961 - 0.14 12.4 0.2 0.14 12.4 0.2 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4157) DUF4703 PF15775.5 ORF69576 - 0.058 13.2 1.8 6.2 6.6 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4703) UB2H PF14814.6 ORF69436 - 0.032 14.2 0.1 0.055 13.5 0.1 1.5 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain BRCT_2 PF16589.5 ORF68843 - 1.1e-12 48.1 0.1 1.4e-12 47.8 0.1 1.1 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 ORF68843 - 0.00045 20.5 0.0 0.00089 19.6 0.0 1.7 1 1 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain LIG3_BRCT PF16759.5 ORF68843 - 0.094 13.0 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 DNA ligase 3 BRCT domain PsbY PF06298.11 ORF67495 - 1.4e-07 31.2 6.4 1.4e-07 31.2 6.4 1.8 2 0 0 2 2 2 1 Photosystem II protein Y (PsbY) HCMVantigenic_N PF12154.8 ORF65599 - 0.55 10.4 4.0 0.98 9.6 3.0 1.9 1 1 1 2 2 2 0 Glycoprotein B N-terminal antigenic domain of HCMV SBP_bac_5 PF00496.22 ORF65384 - 1.1e-07 31.2 0.5 1.8e-07 30.5 0.1 1.5 1 1 1 2 2 2 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF4038 PF13204.6 ORF65384 - 0.027 14.1 0.1 0.03 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4038) SBP_bac_3 PF00497.20 ORF65384 - 0.081 12.3 0.1 0.19 11.1 0.0 1.6 2 0 0 2 2 2 0 Bacterial extracellular solute-binding proteins, family 3 HK_sensor PF16750.5 ORF65164 - 0.0098 16.2 0.0 0.016 15.5 0.0 1.3 1 0 0 1 1 1 1 Sensor domain of 2-component histidine kinase Wap1 PF16997.5 ORF65164 - 0.012 14.7 1.5 0.044 12.9 0.6 1.9 1 1 1 2 2 2 0 Wap1 domain BACK PF07707.15 ORF65164 - 0.016 15.3 0.1 0.4 10.8 0.1 2.0 2 0 0 2 2 2 0 BTB And C-terminal Kelch CM_2 PF01817.21 ORF64706 - 0.026 14.8 0.8 0.04 14.3 0.1 1.6 2 0 0 2 2 2 0 Chorismate mutase type II DUF1836 PF08876.11 ORF64706 - 0.029 14.4 3.3 0.034 14.2 2.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF1836) MobB PF03205.14 ORF64706 - 0.029 14.3 0.3 0.038 13.9 0.3 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B DUF3784 PF12650.7 ORF64706 - 1.4 9.1 3.9 3.7 7.8 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) Herpes_UL16 PF03044.14 ORF635 - 0.0018 17.6 5.6 0.0025 17.2 5.6 1.2 1 0 0 1 1 1 1 Herpesvirus UL16/UL94 family DUF3933 PF13069.6 ORF635 - 0.15 11.9 0.1 0.22 11.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3933) FAD_binding_6 PF00970.24 ORF63001 - 0.051 13.9 0.0 0.22 11.9 0.0 1.8 1 1 1 2 2 2 0 Oxidoreductase FAD-binding domain DUF5381 PF17353.2 ORF62045 - 0.34 10.6 8.7 0.42 10.3 8.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Baculo_11_kDa PF06143.11 ORF61127 - 0.029 13.9 2.0 1.1 8.9 0.0 2.2 2 0 0 2 2 2 0 Baculovirus 11 kDa family COX8 PF02285.15 ORF60714 - 9.3 6.2 6.5 0.58 10.1 0.3 2.3 3 1 0 3 3 3 0 Cytochrome oxidase c subunit VIII ATC_hydrolase PF14196.6 ORF58964 - 0.05 14.4 3.7 0.051 14.3 3.7 1.2 1 0 0 1 1 1 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase Spore_III_AB PF09548.10 ORF58964 - 0.075 13.1 2.1 0.086 12.9 2.1 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) ERp29 PF07749.12 ORF58964 - 0.29 12.1 9.0 0.56 11.1 9.0 1.6 1 1 0 1 1 1 0 Endoplasmic reticulum protein ERp29, C-terminal domain Utp8 PF10395.9 ORF58964 - 0.39 9.2 6.4 0.38 9.2 6.4 1.0 1 0 0 1 1 1 0 Utp8 family THB PF18362.1 ORF58964 - 0.68 9.6 4.8 11 5.7 0.1 3.0 3 0 0 3 3 3 0 Tri-helix bundle domain TCTP PF00838.17 ORF58964 - 2.6 8.4 11.2 2.3 8.6 10.5 1.3 1 1 0 1 1 1 0 Translationally controlled tumour protein DIRP PF06584.13 ORF57720 - 0.042 14.0 0.0 0.043 14.0 0.0 1.2 1 0 0 1 1 1 0 DIRP zf-Tim10_DDP PF02953.15 ORF57644 - 0.012 15.2 3.7 0.022 14.4 3.7 1.4 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Myb_Cef PF11831.8 ORF54706 - 0.056 13.0 0.0 0.056 13.0 0.0 1.1 1 0 0 1 1 1 0 pre-mRNA splicing factor component Xan_ur_permease PF00860.20 ORF53444 - 8.6e-06 24.7 0.1 1e-05 24.4 0.1 1.0 1 0 0 1 1 1 1 Permease family DUF2865 PF11064.8 ORF52345 - 0.017 15.5 0.2 0.026 14.9 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2865) Trimer_CC PF08954.11 ORF52345 - 0.047 13.3 0.9 0.084 12.4 0.9 1.4 1 0 0 1 1 1 0 Trimerisation motif Meis_PKNOX_N PF16493.5 ORF51793 - 2.9 8.3 8.3 0.74 10.2 1.8 2.5 1 1 1 2 2 2 0 N-terminal of Homeobox Meis and PKNOX1 RVT_3 PF13456.6 ORF51754 - 0.072 12.9 0.1 0.096 12.5 0.1 1.1 1 0 0 1 1 1 0 Reverse transcriptase-like Hum_adeno_E3A PF05393.11 ORF49572 - 5.8 6.9 10.6 13 5.8 9.3 2.1 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein Prominin PF05478.11 ORF49404 - 0.4 8.6 4.6 0.41 8.6 4.6 1.0 1 0 0 1 1 1 0 Prominin DUF883 PF05957.13 ORF49404 - 2.9 8.6 8.4 4.4 8.0 4.3 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF4407 PF14362.6 ORF49404 - 8.8 5.6 11.1 12 5.1 11.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4227 PF14004.6 ORF48735 - 0.16 12.0 0.5 0.26 11.3 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) UPF0524 PF15823.5 ORF48471 - 0.01 15.2 0.9 0.012 15.1 0.9 1.1 1 0 0 1 1 1 0 UPF0524 of C3orf70 TLV_coat PF00429.19 ORF48394 - 0.099 11.3 1.6 0.12 11.0 1.6 1.0 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) UPF0731 PF14982.6 ORF47466 - 0.22 11.7 2.5 0.4 10.9 0.1 2.3 2 1 1 3 3 3 0 UPF0731 family Ac81 PF05820.11 ORF47456 - 0.011 15.3 0.1 0.013 15.1 0.1 1.2 1 0 0 1 1 1 0 Baculoviridae AC81 DUF656 PF04920.12 ORF46308 - 0.063 13.2 0.4 0.071 13.0 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF656) zf-RRN7 PF11781.8 ORF45309 - 0.0068 16.1 1.0 0.0068 16.1 1.0 2.2 3 0 0 3 3 3 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 HCMVantigenic_N PF12154.8 ORF450 - 0.55 10.4 4.0 0.98 9.6 3.0 1.9 1 1 1 2 2 2 0 Glycoprotein B N-terminal antigenic domain of HCMV RACo_linker PF17650.1 ORF4432 - 0.1 12.5 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 RACo linker region Peptidase_Prp PF04327.12 ORF42796 - 0.11 12.7 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 Cysteine protease Prp ESP PF16590.5 ORF41831 - 0.018 15.3 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Exocrine gland-secreting peptide PIG-Y PF15159.6 ORF41368 - 0.48 11.4 7.3 1 10.3 7.3 1.6 1 1 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DSPc PF00782.20 ORF41042 - 1.5e-10 41.0 0.0 1.7e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF41042 - 2.8e-05 23.8 0.0 2.8e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF41042 - 3.8e-05 23.8 0.0 4.2e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Inositol hexakisphosphate Y_phosphatase3 PF13350.6 ORF41042 - 0.044 13.7 0.2 0.076 13.0 0.2 1.5 1 1 1 2 2 2 0 Tyrosine phosphatase family Y_phosphatase2 PF03162.13 ORF41042 - 0.083 12.5 0.1 0.13 11.8 0.1 1.4 1 1 0 1 1 1 0 Tyrosine phosphatase family DUF3721 PF12518.8 ORF40474 - 0.062 13.1 2.5 0.16 11.9 2.5 1.7 1 0 0 1 1 1 0 Protein of unknown function ribosomal_L24 PF17136.4 ORF39856 - 1.3e-23 83.2 0.1 1.3e-23 83.2 0.1 1.6 2 0 0 2 2 2 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 ORF39856 - 3.5e-05 23.6 3.2 8.2e-05 22.4 3.2 1.7 1 0 0 1 1 1 1 KOW motif Pox_RNA_pol_35 PF03396.15 ORF38722 - 0.037 13.3 0.1 0.044 13.1 0.1 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 35 kD subunit Ndufs5 PF10200.9 ORF38490 - 0.013 15.7 0.7 0.02 15.2 0.8 1.4 1 1 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa Helicase_C PF00271.31 ORF38100 - 1.1e-20 74.0 0.1 3.1e-20 72.6 0.0 1.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF38100 - 0.0098 15.1 0.0 0.012 14.9 0.0 1.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase RRM_1 PF00076.22 ORF36285 - 1.2e-18 66.7 0.0 1.4e-18 66.4 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF36285 - 1.5e-08 34.2 0.0 1.9e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF36285 - 0.011 15.8 0.1 0.041 14.0 0.1 1.8 1 1 0 1 1 1 0 RNA recognition motif PHM7_cyt PF14703.6 ORF36285 - 0.027 14.7 0.0 0.54 10.5 0.0 2.0 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter RRM_occluded PF16842.5 ORF36285 - 0.028 14.3 0.0 0.037 13.9 0.0 1.2 1 0 0 1 1 1 0 Occluded RNA-recognition motif DUF4523 PF15023.6 ORF36285 - 0.044 13.6 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4523) FXR_C1 PF16096.5 ORF36200 - 0.59 10.4 3.4 0.82 9.9 3.4 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 ACBP PF00887.19 ORF35414 - 5e-08 33.1 0.1 8.7e-08 32.3 0.0 1.4 1 1 0 1 1 1 1 Acyl CoA binding protein DUF2672 PF10878.8 ORF33942 - 0.028 14.4 0.9 0.042 13.8 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2672) MFS_1 PF07690.16 ORF33071 - 0.00011 21.3 0.1 0.00013 21.1 0.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Phospholamban PF04272.14 ORF32816 - 0.03 13.8 0.0 0.051 13.1 0.0 1.3 1 0 0 1 1 1 0 Phospholamban GAS2 PF02187.17 ORF32588 - 0.00079 19.5 0.0 0.0013 18.8 0.0 1.3 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain Adenine_glyco PF03352.13 ORF32588 - 0.13 12.0 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Methyladenine glycosylase GntP_permease PF02447.16 ORF31902 - 2.4e-26 92.4 0.5 2.9e-26 92.2 0.5 1.0 1 0 0 1 1 1 1 GntP family permease LAMTOR5 PF16672.5 ORF29966 - 0.025 14.5 0.0 0.03 14.2 0.0 1.3 1 1 0 1 1 1 0 Ragulator complex protein LAMTOR5 Thionin PF00321.17 ORF28974 - 4.6 7.8 8.2 4 8.0 0.2 3.0 3 0 0 3 3 3 0 Plant thionin DUF4505 PF14956.6 ORF2863 - 2.2e-07 30.8 0.0 2.5e-07 30.6 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4505) ThiF PF00899.21 ORF2798 - 0.099 12.0 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 ThiF family Thionin PF00321.17 ORF27860 - 4.6 7.8 8.2 4 8.0 0.2 3.0 3 0 0 3 3 3 0 Plant thionin ABM PF03992.16 ORF27265 - 1.2e-28 99.0 0.1 1.5e-28 98.8 0.1 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase LAMTOR5 PF16672.5 ORF27011 - 0.025 14.5 0.0 0.03 14.2 0.0 1.3 1 1 0 1 1 1 0 Ragulator complex protein LAMTOR5 DUF4556 PF15094.6 ORF24247 - 0.059 12.6 0.0 0.077 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4556) CBM_15 PF03426.14 ORF24247 - 0.12 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate binding domain (family 15) EF-hand_5 PF13202.6 ORF24221 - 0.098 12.2 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 EF hand DUF4344 PF14247.6 ORF21908 - 0.021 14.5 0.0 0.024 14.3 0.0 1.0 1 0 0 1 1 1 0 Putative metallopeptidase DUF727 PF05303.12 ORF21846 - 1.2e-06 28.5 1.7 3.4e-06 27.1 1.7 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF727) DUF1830 PF08865.11 ORF21627 - 0.048 13.7 1.0 0.11 12.5 0.4 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1830) HSP90 PF00183.18 ORF21489 - 0.14 11.1 0.1 0.17 10.8 0.1 1.0 1 0 0 1 1 1 0 Hsp90 protein ESP PF16590.5 ORF21039 - 0.018 15.3 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Exocrine gland-secreting peptide # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks256.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks256.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks256.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks256.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Inositol_P PF00459.25 ORF18197 - 0.00021 20.9 0.0 0.00024 20.7 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family ACR_tran PF00873.19 ORF17569 - 2.4e-17 62.0 1.0 2.6e-17 61.9 1.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family DUF2207 PF09972.9 ORF16589 - 0.04 12.7 0.6 0.043 12.6 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1700 PF08006.11 ORF16589 - 0.22 11.0 7.2 0.26 10.8 7.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF2417 PF10329.9 ORF16589 - 1.4 8.3 12.1 1.7 8.0 12.1 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Phage_integrase PF00589.22 ORF16555 - 7.1e-05 22.7 0.2 8.8e-05 22.4 0.2 1.1 1 0 0 1 1 1 1 Phage integrase family tRNA-synt_2d PF01409.20 ORF16555 - 0.038 13.5 0.0 0.048 13.1 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) tRNA_edit PF04073.15 ORF16057 - 4.1e-18 65.6 0.1 4.5e-18 65.5 0.1 1.0 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain Peptidase_A21 PF03566.13 ORF15886 - 0.15 10.3 0.0 0.19 10.0 0.0 1.0 1 0 0 1 1 1 0 Peptidase family A21 Kdo PF06293.14 ORF152992 - 0.2 11.0 4.0 0.26 10.6 4.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Serum_albumin PF00273.20 ORF152844 - 0.037 13.8 2.5 0.049 13.4 2.5 1.1 1 0 0 1 1 1 0 Serum albumin family Ras PF00071.22 ORF152332 - 4.9e-23 81.5 0.8 5.3e-23 81.4 0.8 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF152332 - 0.0092 16.2 0.2 0.02 15.1 0.1 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Sec23_trunk PF04811.15 ORF15191 - 0.27 10.8 0.0 0.3 10.6 0.0 1.0 1 0 0 1 1 1 0 Sec23/Sec24 trunk domain Filament PF00038.21 ORF151747 - 3.7e-05 23.5 9.2 3.9e-05 23.4 9.2 1.0 1 0 0 1 1 1 1 Intermediate filament protein APG6_N PF17675.1 ORF151747 - 0.00056 20.5 12.6 0.00068 20.2 12.6 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region DUF4686 PF15742.5 ORF151747 - 0.0015 17.7 8.6 0.0018 17.5 8.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4686) CENP-H PF05837.12 ORF151747 - 0.0017 18.8 7.4 0.0021 18.5 7.4 1.1 1 0 0 1 1 1 1 Centromere protein H (CENP-H) Spc24 PF08286.11 ORF151747 - 0.0051 17.0 8.8 0.009 16.2 8.8 1.5 1 0 0 1 1 1 1 Spc24 subunit of Ndc80 CENP-F_leu_zip PF10473.9 ORF151747 - 0.0057 16.7 11.4 0.0072 16.4 11.4 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 KASH_CCD PF14662.6 ORF151747 - 0.0059 16.5 12.4 0.0073 16.2 12.4 1.1 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH ERM PF00769.19 ORF151747 - 0.0069 16.2 12.4 0.0079 16.0 12.4 1.0 1 0 0 1 1 1 1 Ezrin/radixin/moesin family ASD2 PF08687.11 ORF151747 - 0.0076 15.8 7.1 0.0077 15.8 7.1 1.1 1 0 0 1 1 1 1 Apx/Shroom domain ASD2 Jnk-SapK_ap_N PF09744.9 ORF151747 - 0.01 16.1 9.2 0.013 15.7 9.2 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Syntaxin_2 PF14523.6 ORF151747 - 0.011 16.1 5.0 0.013 15.9 5.0 1.3 1 1 0 1 1 1 0 Syntaxin-like protein Rad9 PF04139.13 ORF151747 - 0.016 14.7 2.7 0.019 14.5 2.7 1.0 1 0 0 1 1 1 0 Rad9 Spc7 PF08317.11 ORF151747 - 0.023 13.6 9.3 0.026 13.4 9.3 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein UPF0242 PF06785.11 ORF151747 - 0.029 14.5 10.8 0.035 14.2 10.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Cep57_MT_bd PF06657.13 ORF151747 - 0.046 14.2 7.6 0.19 12.2 3.3 2.1 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 CLZ PF16526.5 ORF151747 - 0.06 13.7 6.7 0.076 13.4 6.0 1.5 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HAUS6_N PF14661.6 ORF151747 - 0.066 12.8 5.9 0.075 12.6 5.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF3450 PF11932.8 ORF151747 - 0.073 12.4 5.4 0.088 12.1 5.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF241 PF03087.14 ORF151747 - 0.075 12.9 7.8 0.062 13.1 7.0 1.3 1 1 0 1 1 1 0 Arabidopsis protein of unknown function YlqD PF11068.8 ORF151747 - 0.082 13.3 7.5 0.1 13.0 7.5 1.1 1 0 0 1 1 1 0 YlqD protein DASH_Spc19 PF08287.11 ORF151747 - 0.095 12.6 9.2 0.085 12.7 7.9 1.6 1 1 1 2 2 2 0 Spc19 Cas_DxTHG PF09455.10 ORF151747 - 0.1 12.1 5.7 0.11 12.0 5.7 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family TMF_DNA_bd PF12329.8 ORF151747 - 0.15 12.1 16.3 0.1 12.6 12.2 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding FapA PF03961.13 ORF151747 - 0.22 10.1 7.6 0.24 9.9 7.6 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF724 PF05266.14 ORF151747 - 0.31 10.8 9.1 0.37 10.6 9.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ACCA PF03255.14 ORF151747 - 0.57 10.0 5.3 0.69 9.8 5.3 1.1 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UPF0449 PF15136.6 ORF151747 - 0.62 10.6 8.5 1.1 9.8 6.4 2.1 2 1 0 2 2 1 0 Uncharacterised protein family UPF0449 TMPIT PF07851.13 ORF151747 - 0.73 9.0 7.3 0.76 9.0 7.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein Prefoldin_2 PF01920.20 ORF151747 - 0.8 9.7 14.2 0.17 11.8 5.7 2.8 1 1 2 3 3 3 0 Prefoldin subunit DUF4337 PF14235.6 ORF151747 - 0.85 9.7 4.2 1.1 9.3 4.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF2681 PF10883.8 ORF151747 - 1.1 9.7 7.3 1.7 9.1 7.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2681) LAMTOR5 PF16672.5 ORF151351 - 0.025 14.5 0.0 0.03 14.2 0.0 1.3 1 1 0 1 1 1 0 Ragulator complex protein LAMTOR5 DUF1772 PF08592.11 ORF150934 - 0.082 13.2 0.1 0.09 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) NRDE-2 PF08424.10 ORF149799 - 0.11 11.6 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference Kdo PF06293.14 ORF147612 - 0.2 11.0 4.0 0.26 10.6 4.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF3504 PF12012.8 ORF147331 - 0.028 14.3 0.6 0.028 14.3 0.6 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3504) DUF2070 PF09843.9 ORF14724 - 0.032 12.6 12.5 0.033 12.5 12.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) EB_dh PF09459.10 ORF145007 - 0.13 12.3 0.1 0.18 11.7 0.1 1.3 1 1 0 1 1 1 0 Ethylbenzene dehydrogenase Bax1-I PF01027.20 ORF144726 - 3.6e-05 23.7 0.2 4.9e-05 23.3 0.2 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Imm42 PF15593.6 ORF144533 - 0.036 14.6 0.2 0.042 14.3 0.2 1.1 1 0 0 1 1 1 0 Immunity protein 42 DUF1477 PF07346.11 ORF14392 - 0.05 13.8 2.8 0.12 12.6 0.3 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF1477) SSFA2_C PF14723.6 ORF143423 - 0.04 13.8 0.7 0.05 13.5 0.7 1.1 1 0 0 1 1 1 0 Sperm-specific antigen 2 C-terminus Rdx PF10262.9 ORF143120 - 6.1e-11 42.4 0.0 7.2e-11 42.1 0.0 1.1 1 0 0 1 1 1 1 Rdx family Big_3 PF07523.12 ORF143120 - 0.03 14.6 0.1 0.047 14.0 0.1 1.3 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) Peptidase_A4 PF01828.17 ORF143120 - 0.032 13.7 0.0 0.033 13.6 0.0 1.1 1 0 0 1 1 1 0 Peptidase A4 family DUF1190 PF06693.11 ORF143120 - 0.057 13.8 0.1 0.069 13.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1190) RNA_pol_Rpb1_7 PF04990.12 ORF14151 - 0.003 17.6 1.4 0.0036 17.3 1.4 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 7 UTRA PF07702.13 ORF138894 - 1.8e-21 76.5 0.0 2e-21 76.3 0.0 1.0 1 0 0 1 1 1 1 UTRA domain PreAtp-grasp PF18604.1 ORF138894 - 0.048 13.3 0.0 0.066 12.9 0.0 1.2 1 0 0 1 1 1 0 Pre ATP-grasp domain Meckelin PF09773.9 ORF138518 - 0.059 11.5 0.5 0.066 11.3 0.5 1.1 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) Metallophos_2 PF12850.7 ORF138240 - 1.7e-11 44.6 0.0 2.1e-11 44.3 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Ycf66_N PF07444.11 ORF136612 - 0.0077 16.3 0.0 0.0096 16.0 0.0 1.2 1 0 0 1 1 1 1 Ycf66 protein N-terminus DndB PF14072.6 ORF1361 - 0.15 11.3 0.0 0.22 10.7 0.0 1.1 1 0 0 1 1 1 0 DNA-sulfur modification-associated Arf PF00025.21 ORF135651 - 7.3e-05 22.3 0.1 7.4e-05 22.3 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family ATP_bind_1 PF03029.17 ORF135651 - 0.059 13.1 0.0 0.062 13.1 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Pou PF00157.17 ORF135454 - 0.045 13.7 0.2 0.17 11.9 0.0 2.0 3 0 0 3 3 3 0 Pou domain - N-terminal to homeobox domain Chlorophyllase2 PF12740.7 ORF13369 - 0.084 11.8 0.3 0.099 11.5 0.3 1.1 1 0 0 1 1 1 0 Chlorophyllase enzyme 2H-phosphodiest PF08975.10 ORF13227 - 0.078 13.0 0.0 0.18 11.8 0.0 1.5 1 1 0 2 2 2 0 Domain of unknown function (DUF1868) DUF3725 PF12523.8 ORF13227 - 0.088 13.1 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3725) Viral_DNA_bp PF00747.17 ORF13227 - 0.19 8.9 1.1 0.2 8.8 1.1 1.1 1 0 0 1 1 1 0 ssDNA binding protein Sec1 PF00995.23 ORF132034 - 1.8e-09 37.4 0.0 1.9e-09 37.3 0.0 1.0 1 0 0 1 1 1 1 Sec1 family EF-hand_4 PF12763.7 ORF131828 - 0.0056 16.6 0.2 0.0079 16.1 0.2 1.3 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand PLA1 PF02253.15 ORF130641 - 0.15 11.6 0.3 0.18 11.3 0.3 1.1 1 0 0 1 1 1 0 Phospholipase A1 zf-RING_12 PF17976.1 ORF130498 - 0.035 14.4 0.1 0.066 13.5 0.1 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain RAB3GAP2_C PF14656.6 ORF128790 - 0.13 10.5 0.0 0.13 10.4 0.0 1.0 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit C-terminus DUF4381 PF14316.6 ORF128343 - 0.0094 16.2 0.4 0.011 16.0 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4381) RAB3GAP2_C PF14656.6 ORF12821 - 0.13 10.5 0.0 0.13 10.4 0.0 1.0 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit C-terminus MPC PF03650.13 ORF12813 - 5.2e-08 33.0 0.0 5.5e-08 32.9 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers NO_synthase PF02898.15 ORF127433 - 0.24 10.4 0.1 0.25 10.4 0.1 1.1 1 0 0 1 1 1 0 Nitric oxide synthase, oxygenase domain Nbl1_Borealin_N PF10444.9 ORF126714 - 0.033 13.8 0.7 0.033 13.8 0.7 1.9 2 0 0 2 2 2 0 Nbl1 / Borealin N terminal TetR_C_37 PF18665.1 ORF126714 - 0.11 13.1 4.2 0.69 10.5 0.6 2.2 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain MSA-2c PF12238.8 ORF126714 - 0.36 10.8 5.5 0.41 10.6 5.5 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c AAA_23 PF13476.6 ORF126714 - 0.6 10.6 9.8 0.65 10.5 9.8 1.1 1 0 0 1 1 1 0 AAA domain PCRF PF03462.18 ORF126714 - 0.99 9.2 5.9 1.1 9.0 5.5 1.3 1 1 0 1 1 1 0 PCRF domain CCAP PF11105.8 ORF126431 - 0.097 12.6 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a Corona_NS1 PF06145.11 ORF12634 - 0.57 9.7 1.5 13 5.4 0.0 3.0 3 0 0 3 3 3 0 Coronavirus nonstructural protein NS1 DUF5551 PF17705.1 ORF124754 - 0.082 12.5 0.1 0.09 12.4 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5551) zf-AN1 PF01428.16 ORF124395 - 0.0033 17.5 2.8 0.0033 17.5 2.8 2.7 3 0 0 3 3 3 1 AN1-like Zinc finger Lactamase_B_4 PF13691.6 ORF124395 - 0.12 12.1 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 tRNase Z endonuclease Pox_RNA_pol_35 PF03396.15 ORF124340 - 0.037 13.3 0.1 0.044 13.1 0.1 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 35 kD subunit GluR_Homer-bdg PF10606.9 ORF122714 - 0.00026 21.1 1.1 0.0041 17.3 0.2 2.3 2 0 0 2 2 2 2 Homer-binding domain of metabotropic glutamate receptor DUF948 PF06103.11 ORF121609 - 0.0071 16.6 0.5 0.016 15.5 0.5 1.7 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF948) Not3 PF04065.15 ORF121609 - 0.0082 15.6 5.6 0.009 15.5 5.6 1.0 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component NPV_P10 PF05531.12 ORF121609 - 0.012 16.1 1.2 0.19 12.2 0.2 2.1 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein COG2 PF06148.11 ORF121609 - 0.016 15.3 3.7 0.023 14.8 3.7 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 SH3BP5 PF05276.14 ORF121609 - 0.036 13.9 5.9 0.55 10.0 1.6 2.0 1 1 1 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) PEP-utilisers_N PF05524.13 ORF121609 - 0.051 13.7 1.5 0.063 13.4 1.5 1.1 1 0 0 1 1 1 0 PEP-utilising enzyme, N-terminal TraC PF07820.12 ORF121609 - 0.19 12.1 3.1 4.5 7.7 2.1 2.1 1 1 1 2 2 2 0 TraC-like protein TolA_bind_tri PF16331.5 ORF121609 - 0.19 11.8 3.7 0.25 11.4 0.4 2.4 2 1 0 2 2 2 0 TolA binding protein trimerisation KapB PF08810.10 ORF121609 - 0.33 11.1 2.3 3 8.1 1.9 2.5 2 1 0 2 2 2 0 Kinase associated protein B DUF4251 PF14059.6 ORF121589 - 0.0067 16.4 0.6 0.0095 15.9 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4251) PrcB_C PF14343.6 ORF121589 - 0.011 15.9 0.2 0.019 15.1 0.2 1.4 1 0 0 1 1 1 0 PrcB C-terminal DUF3852 PF12963.7 ORF120635 - 0.066 13.5 0.0 0.097 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3852) DUF4079 PF13301.6 ORF120635 - 0.1 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4079) CRAL_TRIO PF00650.20 ORF119326 - 7.8e-10 38.7 0.0 9.2e-10 38.5 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain BEN PF10523.9 ORF119326 - 0.058 13.6 0.0 0.097 12.9 0.0 1.4 1 0 0 1 1 1 0 BEN domain CRAL_TRIO_2 PF13716.6 ORF119326 - 0.1 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain LAMTOR5 PF16672.5 ORF119088 - 0.025 14.5 0.0 0.03 14.2 0.0 1.3 1 1 0 1 1 1 0 Ragulator complex protein LAMTOR5 Ribonuc_L-PSP PF01042.21 ORF118260 - 1.5e-37 128.3 0.3 1.6e-37 128.2 0.3 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF3857 PF12969.7 ORF118260 - 0.037 14.1 0.0 0.043 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3857) GSCFA PF08885.11 ORF117563 - 0.12 12.0 1.5 4.1 7.0 0.0 2.0 2 0 0 2 2 2 0 GSCFA family Dus PF01207.17 ORF117430 - 6.5e-20 71.4 0.0 7.2e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) MNNL PF07657.13 ORF117042 - 0.016 15.2 2.3 0.016 15.2 2.3 1.9 1 1 1 2 2 2 0 N terminus of Notch ligand Vma12 PF11712.8 ORF117042 - 2.1 8.4 4.0 3.1 7.8 4.0 1.3 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF4577 PF15145.6 ORF117042 - 5 7.2 8.7 1.5 8.8 5.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4577) HlyD_2 PF12700.7 ORF117042 - 5.6 5.6 6.2 6.9 5.3 6.2 1.1 1 0 0 1 1 1 0 HlyD family secretion protein NCOA_u2 PF16665.5 ORF116287 - 0.068 13.5 0.3 0.091 13.1 0.2 1.3 1 1 0 1 1 1 0 Unstructured region on nuclear receptor coactivator protein MR_MLE_C PF13378.6 ORF114092 - 7.7e-09 35.4 0.0 9e-09 35.2 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like DUF3198 PF11433.8 ORF112359 - 0.18 11.7 2.4 11 6.1 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3198) Mito_carr PF00153.27 ORF112277 - 0.063 13.2 0.1 0.091 12.7 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial carrier protein DUF1329 PF07044.11 ORF112070 - 0.054 12.8 0.1 0.064 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1329) DUF4094 PF13334.6 ORF112070 - 0.1 13.0 1.0 0.18 12.3 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) DUF2956 PF11169.8 ORF112070 - 0.86 9.8 8.8 3.5 7.9 2.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2956) TMPIT PF07851.13 ORF112070 - 7 5.8 9.3 4 6.6 6.8 1.4 1 1 0 1 1 1 0 TMPIT-like protein Sugar_tr PF00083.24 ORF111157 - 3.1e-13 49.4 9.8 3.3e-13 49.3 9.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Rota_NSP4 PF01452.16 ORF111157 - 0.31 10.7 1.0 0.8 9.4 0.8 1.7 1 1 1 2 2 2 0 Rotavirus non structural protein Metallothio_11 PF02066.15 ORF110418 - 0.043 14.0 4.9 0.043 14.0 4.9 1.5 2 0 0 2 2 2 0 Metallothionein family 11 DUF1673 PF07895.11 ORF10967 - 0.016 14.9 0.4 0.04 13.6 0.4 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1673) PROL5-SMR PF15621.6 ORF109391 - 0.055 14.0 0.7 0.064 13.8 0.7 1.2 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Fijivirus_P9-2 PF06837.11 ORF109244 - 0.43 10.0 4.1 0.52 9.7 4.1 1.2 1 0 0 1 1 1 0 Fijivirus P9-2 protein CBFD_NFYB_HMF PF00808.23 ORF108847 - 3.9e-11 43.1 0.0 5.4e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF108847 - 8.2e-07 29.4 0.0 1.1e-06 29.0 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Ribosomal_60s PF00428.19 ORF108847 - 0.087 13.4 0.7 0.16 12.6 0.7 1.5 1 0 0 1 1 1 0 60s Acidic ribosomal protein TauE PF01925.19 ORF10864 - 0.008 15.8 1.0 0.0082 15.8 1.0 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE MFS_1 PF07690.16 ORF10864 - 0.095 11.6 7.2 0.11 11.5 7.2 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily Corona_NS1 PF06145.11 ORF108585 - 1.4 8.5 3.2 13 5.4 0.0 3.1 3 1 0 2 2 2 0 Coronavirus nonstructural protein NS1 FPN1 PF06963.12 ORF107955 - 0.016 13.8 0.1 0.019 13.5 0.1 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) Ribosomal_S6 PF01250.17 ORF106584 - 0.053 13.8 0.0 0.067 13.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S6 CHCH PF06747.13 ORF105318 - 0.00038 20.5 5.5 0.033 14.3 0.4 3.2 2 1 2 4 4 4 1 CHCH domain Pet191_N PF10203.9 ORF105318 - 0.0035 17.6 6.3 0.24 11.7 1.2 2.7 1 1 1 2 2 2 2 Cytochrome c oxidase assembly protein PET191 DUF3128 PF11326.8 ORF105318 - 0.0062 16.9 8.9 0.13 12.6 0.1 3.5 1 1 2 3 3 3 2 Protein of unknown function (DUF3128) CX9C PF16860.5 ORF105318 - 0.013 15.5 6.4 0.45 10.6 1.1 2.6 1 1 1 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, DUF1981 PF09324.10 ORF105318 - 0.041 13.7 0.1 0.064 13.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1981) IL3 PF02059.15 ORF105318 - 0.081 13.0 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Interleukin-3 Cys_rich_FGFR PF00839.17 ORF105318 - 0.23 11.6 3.8 2.4 8.4 3.8 2.3 1 1 0 1 1 1 0 Cysteine rich repeat Cmc1 PF08583.10 ORF105318 - 0.89 9.6 8.5 0.53 10.3 1.6 2.8 1 1 2 3 3 3 0 Cytochrome c oxidase biogenesis protein Cmc1 like COX6B PF02297.17 ORF105318 - 1.5 9.1 7.5 14 6.0 0.1 3.1 1 1 2 3 3 3 0 Cytochrome oxidase c subunit VIb ENT PF03735.14 ORF102635 - 0.11 12.5 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 ENT domain KAAG1 PF15354.6 ORF101374 - 0.15 12.6 0.0 0.21 12.2 0.0 1.2 1 0 0 1 1 1 0 Kidney-associated antigen 1 Thia_YuaJ PF09515.10 ORF101091 - 0.12 12.4 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Thiamine transporter protein (Thia_YuaJ) DUF4088 PF13317.6 ORF10027 - 0.068 12.7 0.2 0.081 12.5 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4088) GCM PF03615.15 NODE_55902_length_307_cov_1.437500_g47967_i0reverse_frame_1 - 0.047 13.6 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 GCM motif protein Arena_glycoprot PF00798.18 NODE_55901_length_307_cov_1.492647_g47966_i0reverse_frame_1 - 0.032 12.9 0.8 0.037 12.7 0.8 1.0 1 0 0 1 1 1 0 Arenavirus glycoprotein DUF4363 PF14276.6 NODE_55900_length_307_cov_1.496324_g47965_i0reverse_frame_1 - 0.0071 16.4 0.3 0.011 15.8 0.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) BppU_IgG PF18667.1 NODE_55900_length_307_cov_1.496324_g47965_i0reverse_frame_1 - 0.066 13.4 0.0 0.083 13.0 0.0 1.1 1 0 0 1 1 1 0 Baseplate upper protein immunoglobulin like domain E1-E2_ATPase PF00122.20 NODE_55897_length_307_cov_1.555147_g47962_i0forward_frame_1 - 2.9e-06 26.9 0.0 3.3e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 E1-E2 ATPase Pkinase PF00069.25 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 4.5e-30 104.9 0.1 4.8e-30 104.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 1.2e-11 44.5 0.0 1.3e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.0046 16.3 0.0 0.0051 16.2 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.018 14.0 0.1 0.021 13.8 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.042 13.5 0.0 0.049 13.2 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.063 12.6 0.1 0.091 12.1 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.12 11.9 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL APH PF01636.23 NODE_55895_length_307_cov_1.569853_g47960_i0forward_frame_1 - 0.14 12.1 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family eIF3g PF12353.8 NODE_55886_length_307_cov_1.823529_g47951_i0reverse_frame_1 - 0.0019 18.5 2.2 0.003 18.0 2.2 1.4 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit G zf-CCHC_3 PF13917.6 NODE_55886_length_307_cov_1.823529_g47951_i0reverse_frame_1 - 0.003 17.5 2.9 0.0048 16.8 2.9 1.3 1 0 0 1 1 1 1 Zinc knuckle PsbH PF00737.20 NODE_55882_length_307_cov_1.897059_g47947_i0forward_frame_1 - 0.13 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein Neuregulin PF02158.15 NODE_55873_length_307_cov_2.198529_g47938_i0reverse_frame_1 - 0.53 9.6 1.3 0.63 9.3 1.3 1.0 1 0 0 1 1 1 0 Neuregulin intracellular region OKR_DC_1_N PF03709.15 NODE_55870_length_307_cov_2.349265_g47935_i0forward_frame_1 - 0.22 11.8 0.0 0.24 11.7 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain Podoplanin PF05808.11 NODE_55865_length_307_cov_2.492647_g47930_i0forward_frame_1 - 0.04 14.0 0.0 0.045 13.8 0.0 1.1 1 0 0 1 1 1 0 Podoplanin Ion_trans PF00520.31 NODE_55865_length_307_cov_2.492647_g47930_i0forward_frame_1 - 0.11 11.7 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Ion transport protein EphA2_TM PF14575.6 NODE_55865_length_307_cov_2.492647_g47930_i0forward_frame_1 - 0.14 13.0 0.3 0.28 12.1 0.3 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain VAD1-2 PF15310.6 NODE_55862_length_307_cov_2.599265_g47927_i0reverse_frame_1 - 0.094 12.6 0.0 0.099 12.5 0.0 1.1 1 0 0 1 1 1 0 Vitamin A-deficiency (VAD) rat model signalling DUF4387 PF14330.6 NODE_55862_length_307_cov_2.599265_g47927_i0reverse_frame_1 - 0.16 12.7 1.1 0.21 12.3 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4387) Arteri_GP4 PF02497.15 NODE_55861_length_307_cov_2.680147_g47926_i0forward_frame_1 - 0.051 13.7 0.1 0.072 13.2 0.1 1.3 1 1 0 1 1 1 0 Arterivirus glycoprotein Papo_T_antigen PF02380.15 NODE_55860_length_307_cov_2.819853_g47925_i0reverse_frame_1 - 0.01 15.9 0.2 0.013 15.6 0.2 1.2 1 0 0 1 1 1 0 T-antigen specific domain DUF1057 PF06342.12 NODE_55857_length_307_cov_2.841912_g47922_i0reverse_frame_1 - 0.12 11.4 0.1 0.15 11.1 0.1 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Usher PF00577.20 NODE_55852_length_307_cov_3.073529_g47917_i0forward_frame_1 - 1.3e-19 70.5 4.5 1.4e-19 70.4 4.5 1.0 1 0 0 1 1 1 1 Outer membrane usher protein ShlB PF03865.13 NODE_55852_length_307_cov_3.073529_g47917_i0forward_frame_1 - 0.0063 16.0 3.1 0.0086 15.6 2.9 1.3 1 1 0 1 1 1 1 Haemolysin secretion/activation protein ShlB/FhaC/HecB Churchill PF06573.11 NODE_55850_length_307_cov_3.209559_g47915_i0forward_frame_1 - 0.007 16.7 0.2 0.0092 16.3 0.2 1.1 1 0 0 1 1 1 1 Churchill protein Pneumo_M2 PF07380.11 NODE_55846_length_307_cov_3.830882_g47911_i0forward_frame_1 - 0.17 12.2 4.5 0.53 10.6 4.5 1.8 1 1 0 1 1 1 0 Pneumovirus M2 protein ASFV_L11L PF05293.11 NODE_55841_length_307_cov_42.977941_g47906_i0forward_frame_1 - 0.0055 17.0 1.9 0.0068 16.7 1.9 1.3 1 0 0 1 1 1 1 African swine fever virus (ASFV) L11L protein P34-Arc PF04045.14 NODE_55840_length_307_cov_53.830882_g47905_i0forward_frame_1 - 0.044 13.5 1.7 0.061 13.0 1.7 1.2 1 0 0 1 1 1 0 Arp2/3 complex, 34 kD subunit p34-Arc Uds1 PF15456.6 NODE_55840_length_307_cov_53.830882_g47905_i0forward_frame_1 - 0.87 9.8 12.9 0.31 11.2 6.0 2.0 2 0 0 2 2 2 0 Up-regulated During Septation FUSC PF04632.12 NODE_55840_length_307_cov_53.830882_g47905_i0forward_frame_1 - 1.2 7.6 3.3 1.3 7.5 3.3 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Ly49 PF08391.10 NODE_55838_length_307_cov_56.147059_g47903_i0reverse_frame_1 - 0.24 11.8 1.0 0.29 11.5 1.0 1.2 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region CLN3 PF02487.17 NODE_55838_length_307_cov_56.147059_g47903_i0reverse_frame_1 - 0.37 9.8 0.6 0.4 9.7 0.6 1.0 1 0 0 1 1 1 0 CLN3 protein TMEM101 PF15111.6 NODE_55836_length_307_cov_58.709559_g47901_i0reverse_frame_1 - 0.059 12.9 0.0 0.071 12.7 0.0 1.1 1 0 0 1 1 1 0 TMEM101 protein family RPOL_N PF14700.6 NODE_55835_length_307_cov_62.389706_g47900_i0reverse_frame_1 - 0.0015 18.0 0.5 0.0017 17.8 0.5 1.0 1 0 0 1 1 1 1 DNA-directed RNA polymerase N-terminal Fun_ATP-synt_8 PF05933.13 NODE_55834_length_307_cov_64.106618_g47899_i0reverse_frame_1 - 0.23 11.6 4.8 1.3 9.3 0.1 2.7 1 1 2 3 3 3 0 Fungal ATP synthase protein 8 (A6L) RseC_MucC PF04246.12 NODE_55828_length_307_cov_71.316176_g47893_i0reverse_frame_1 - 8.1 6.4 6.4 12 5.9 6.4 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Rod_cone_degen PF15201.6 NODE_55827_length_307_cov_72.400735_g47892_i0forward_frame_1 - 0.0022 18.1 0.3 0.0035 17.4 0.3 1.4 1 0 0 1 1 1 1 Progressive rod-cone degeneration DUF1786 PF08735.10 NODE_55822_length_307_cov_83.327206_g47887_i0reverse_frame_1 - 0.15 11.3 0.0 0.17 11.1 0.0 1.1 1 0 0 1 1 1 0 Putative pyruvate format-lyase activating enzyme (DUF1786) PH_11 PF15413.6 NODE_55812_length_307_cov_188.529412_g47877_i0forward_frame_1 - 0.14 12.6 0.5 0.17 12.3 0.5 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain BCD PF15461.6 NODE_55810_length_307_cov_278.577206_g47875_i0forward_frame_1 - 0.23 10.9 0.1 0.28 10.7 0.1 1.1 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase SCIMP PF15050.6 NODE_55808_length_307_cov_314.205882_g47873_i0reverse_frame_1 - 0.069 13.6 0.0 0.071 13.6 0.0 1.2 1 0 0 1 1 1 0 SCIMP protein NatB_MDM20 PF09797.9 NODE_55796_length_308_cov_1.498168_g47861_i0forward_frame_1 - 0.11 11.4 0.3 0.14 11.0 0.3 1.1 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit Defensin_5 PF18251.1 NODE_55795_length_308_cov_1.531136_g47860_i0forward_frame_1 - 0.54 10.4 5.4 0.73 10.0 1.8 2.2 1 1 1 2 2 2 0 Fungal defensin Copsin UCH PF00443.29 NODE_55788_length_308_cov_1.688645_g47853_i0reverse_frame_1 - 4e-05 23.2 2.7 4e-05 23.2 2.7 1.6 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase DUF3533 PF12051.8 NODE_55781_length_308_cov_1.846154_g47846_i0reverse_frame_1 - 0.12 11.3 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) Nodulin_late PF07127.11 NODE_55780_length_308_cov_1.853480_g47845_i0reverse_frame_1 - 0.076 13.4 0.4 0.14 12.5 0.4 1.4 1 0 0 1 1 1 0 Late nodulin protein Glucos_trans_II PF14264.6 NODE_55775_length_308_cov_1.934066_g47840_i0forward_frame_1 - 0.048 13.0 0.1 0.053 12.9 0.1 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII 7TM-7TMR_HD PF07698.11 NODE_55773_length_308_cov_1.956044_g47838_i0forward_frame_1 - 0.0054 16.5 6.5 0.007 16.1 6.5 1.2 1 0 0 1 1 1 1 7TM receptor with intracellular HD hydrolase DUF3810 PF12725.7 NODE_55773_length_308_cov_1.956044_g47838_i0forward_frame_1 - 2.3 7.5 6.5 2.8 7.2 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF4231 PF14015.6 NODE_55773_length_308_cov_1.956044_g47838_i0forward_frame_1 - 8.3 6.9 8.2 42 4.7 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) Tox-SGS PF15651.6 NODE_55771_length_308_cov_2.062271_g47836_i0forward_frame_1 - 0.044 14.0 0.0 0.082 13.1 0.0 1.5 1 1 0 1 1 1 0 Salivary glad secreted protein domain toxin RAG1_imp_bd PF12560.8 NODE_55762_length_308_cov_2.329670_g47827_i0reverse_frame_1 - 0.0034 17.0 1.6 0.0038 16.8 1.6 1.1 1 0 0 1 1 1 1 RAG1 importin binding Arena_nucleocap PF00843.17 NODE_55762_length_308_cov_2.329670_g47827_i0reverse_frame_1 - 0.0049 15.8 0.6 0.38 9.6 0.0 2.0 1 1 1 2 2 2 2 Arenavirus nucleocapsid N-terminal domain Ish1 PF10281.9 NODE_55762_length_308_cov_2.329670_g47827_i0reverse_frame_1 - 0.067 13.5 0.1 0.16 12.3 0.1 1.7 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein Di19_C PF14571.6 NODE_55759_length_308_cov_2.388278_g47824_i0reverse_frame_1 - 0.027 15.0 0.3 0.03 14.8 0.3 1.2 1 0 0 1 1 1 0 Stress-induced protein Di19, C-terminal Cytochrom_B559a PF00284.20 NODE_55754_length_308_cov_2.721612_g47819_i0forward_frame_1 - 5.7 6.8 12.8 14 5.6 1.7 3.4 3 0 0 3 3 3 0 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit HlyD PF00529.20 NODE_55751_length_308_cov_2.926740_g47816_i0reverse_frame_1 - 4.6e-09 36.0 0.2 5.9e-09 35.7 0.2 1.1 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS DUF334 PF03904.13 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.0077 15.8 5.0 0.0088 15.6 5.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF334) DUF4795 PF16043.5 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.012 15.2 5.0 0.015 15.0 5.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) Nsp1_C PF05064.13 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.013 15.3 2.3 0.014 15.2 1.1 1.7 1 1 0 1 1 1 0 Nsp1-like C-terminal region GlutR_dimer PF00745.20 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.026 14.9 1.1 0.041 14.3 0.9 1.4 1 1 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain REC1 PF18501.1 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.031 14.2 2.8 0.037 13.9 2.8 1.0 1 0 0 1 1 1 0 Alpha helical recognition lobe domain OEP PF02321.18 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.039 13.8 3.6 0.043 13.6 3.6 1.1 1 0 0 1 1 1 0 Outer membrane efflux protein DUF1863 PF08937.11 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.068 13.5 0.5 0.08 13.3 0.5 1.2 1 0 0 1 1 1 0 MTH538 TIR-like domain (DUF1863) HalX PF08663.10 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.078 13.3 0.5 0.16 12.3 0.5 1.6 1 0 0 1 1 1 0 HalX domain Nas2_N PF18265.1 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_1 - 0.11 12.4 1.7 0.29 11.1 0.2 2.2 2 1 0 2 2 2 0 Nas2 N_terminal domain PAN_1 PF00024.26 NODE_55745_length_308_cov_3.267399_g47810_i0forward_frame_1 - 0.93 9.5 5.7 0.43 10.6 2.3 1.9 1 1 1 2 2 2 0 PAN domain IMUP PF15761.5 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 0.0039 17.9 2.9 0.0043 17.7 2.9 1.1 1 0 0 1 1 1 1 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 0.071 12.7 7.6 0.078 12.6 7.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 1.2 9.5 12.1 1.3 9.3 12.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Dehydrin PF00257.19 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 1.4 9.5 5.7 2.2 8.8 5.7 1.4 1 1 0 1 1 1 0 Dehydrin DUF2749 PF10907.8 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_1 - 9.2 6.5 14.7 0.7 10.1 8.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) FAM76 PF16046.5 NODE_55741_length_308_cov_17.930403_g47806_i0reverse_frame_1 - 0.018 14.5 3.2 0.019 14.4 3.2 1.1 1 0 0 1 1 1 0 FAM76 protein Fez1 PF06818.15 NODE_55741_length_308_cov_17.930403_g47806_i0reverse_frame_1 - 0.027 14.9 1.9 0.027 14.9 1.9 2.2 1 1 1 2 2 2 0 Fez1 TSC22 PF01166.18 NODE_55741_length_308_cov_17.930403_g47806_i0reverse_frame_1 - 0.49 10.7 8.0 1.9 8.9 0.8 3.1 2 1 2 4 4 4 0 TSC-22/dip/bun family DivIC PF04977.15 NODE_55741_length_308_cov_17.930403_g47806_i0reverse_frame_1 - 1.8 8.4 9.9 1.8 8.4 2.6 2.8 1 1 2 3 3 3 0 Septum formation initiator CorC_HlyC PF03471.17 NODE_55734_length_308_cov_50.717949_g47799_i0reverse_frame_1 - 0.0024 17.9 0.0 0.0025 17.8 0.0 1.1 1 0 0 1 1 1 1 Transporter associated domain Potex_coat PF06184.11 NODE_55731_length_308_cov_55.487179_g47796_i0forward_frame_1 - 0.023 14.3 0.0 0.026 14.1 0.0 1.4 1 1 0 1 1 1 0 Potexvirus coat protein Synthase_beta PF11421.8 NODE_55730_length_308_cov_60.443223_g47795_i0reverse_frame_1 - 5.7 7.7 10.1 15 6.4 0.6 2.2 1 1 1 2 2 2 0 ATP synthase F1 beta subunit Bacteriocin_IIc PF10439.9 NODE_55730_length_308_cov_60.443223_g47795_i0forward_frame_1 - 0.11 12.6 4.8 0.18 12.0 4.8 1.3 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide VSP PF03302.13 NODE_55723_length_308_cov_67.721612_g47788_i0reverse_frame_1 - 0.005 15.8 15.9 0.0065 15.4 15.9 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein Lipase_chap PF03280.14 NODE_55719_length_308_cov_74.871795_g47784_i0reverse_frame_1 - 0.0017 18.4 2.8 0.0019 18.2 2.8 1.1 1 0 0 1 1 1 1 Proteobacterial lipase chaperone protein Fer4_4 PF12800.7 NODE_55718_length_308_cov_75.000000_g47783_i0forward_frame_1 - 0.0026 18.1 0.8 0.0026 18.1 0.8 3.8 3 2 0 3 3 3 1 4Fe-4S binding domain Pex2_Pex12 PF04757.14 NODE_55708_length_308_cov_158.989011_g47773_i0reverse_frame_1 - 0.0097 15.5 1.1 0.0097 15.5 1.1 1.1 1 0 0 1 1 1 1 Pex2 / Pex12 amino terminal region ATP-synt_8 PF00895.20 NODE_55708_length_308_cov_158.989011_g47773_i0reverse_frame_1 - 0.45 11.0 6.0 0.21 12.1 2.8 1.9 1 1 0 2 2 2 0 ATP synthase protein 8 YqzE PF14038.6 NODE_55707_length_308_cov_159.252747_g47772_i0reverse_frame_1 - 0.00096 19.1 1.5 0.0015 18.5 1.5 1.2 1 0 0 1 1 1 1 YqzE-like protein PC4 PF02229.16 NODE_55698_length_308_cov_1117.018315_g47763_i0reverse_frame_1 - 4.5e-06 26.2 0.1 9.9e-06 25.1 0.1 1.6 1 0 0 1 1 1 1 Transcriptional Coactivator p15 (PC4) Pex14_N PF04695.13 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 0.077 13.6 9.1 0.095 13.4 9.1 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region TFB6 PF17110.5 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 0.57 9.9 7.7 0.61 9.8 7.7 1.2 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF4637 PF15470.6 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 1.5 8.5 12.5 1.8 8.3 12.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF3306 PF11748.8 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 4.2 8.3 15.2 5.1 8.0 15.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3306) DUF2052 PF09747.9 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 5.7 7.0 18.6 6.8 6.8 18.6 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) RR_TM4-6 PF06459.12 NODE_55694_length_308_cov_38451.216117_g47759_i0reverse_frame_1 - 6.5 6.5 19.1 7.4 6.3 19.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 TspO_MBR PF03073.15 NODE_55693_length_308_cov_56529.959707_g47758_i0forward_frame_1 - 0.024 14.7 2.4 0.034 14.2 2.4 1.1 1 0 0 1 1 1 0 TspO/MBR family RcsC PF09456.10 NODE_55685_length_309_cov_1.635036_g47750_i0forward_frame_1 - 0.079 13.0 0.4 0.13 12.3 0.4 1.4 1 0 0 1 1 1 0 RcsC Alpha-Beta-Loop (ABL) Mlf1IP PF10248.9 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_1 - 0.064 13.2 3.1 0.074 13.0 3.1 1.2 1 0 0 1 1 1 0 Myelodysplasia-myeloid leukemia factor 1-interacting protein MSL2-CXC PF16682.5 NODE_55677_length_309_cov_1.901460_g47742_i0reverse_frame_1 - 7.3 6.8 10.9 0.089 12.9 1.9 2.3 3 0 0 3 3 3 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Mob_synth_C PF06463.13 NODE_55672_length_309_cov_2.010949_g47737_i0reverse_frame_1 - 0.062 13.2 0.7 0.1 12.5 0.1 1.6 2 0 0 2 2 2 0 Molybdenum Cofactor Synthesis C PHD_Oberon PF07227.11 NODE_55672_length_309_cov_2.010949_g47737_i0reverse_frame_1 - 0.22 11.4 6.4 0.45 10.4 6.5 1.4 1 1 0 1 1 1 0 PHD - plant homeodomain finger protein GST_N_3 PF13417.6 NODE_55672_length_309_cov_2.010949_g47737_i0reverse_frame_1 - 0.28 11.6 0.8 36 4.9 0.0 2.9 2 1 0 2 2 2 0 Glutathione S-transferase, N-terminal domain Leader_Trp PF08255.11 NODE_55662_length_309_cov_2.554745_g47727_i0forward_frame_1 - 0.69 10.0 6.4 13 6.1 0.9 2.8 2 0 0 2 2 2 0 Trp-operon Leader Peptide SpoU_methylas_C PF12105.8 NODE_55658_length_309_cov_2.934307_g47723_i0forward_frame_1 - 0.12 12.1 0.4 0.17 11.6 0.4 1.3 1 0 0 1 1 1 0 SpoU, rRNA methylase, C-terminal Fer4_17 PF13534.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 6.9e-11 42.5 0.9 8.7e-11 42.2 0.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 2.1e-08 34.5 18.2 1.7e-07 31.5 5.2 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 4e-08 33.2 1.4 5.4e-08 32.8 1.4 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 9e-05 23.0 5.7 0.00029 21.4 5.8 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.00018 21.6 4.2 0.0007 19.7 4.3 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.0032 17.6 1.9 1.7 8.9 0.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.013 15.9 7.0 0.83 10.3 1.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.042 14.8 6.4 2.7 9.0 0.1 2.2 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4 PF00037.27 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.054 13.3 13.7 0.18 11.7 0.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.18 11.9 0.5 0.18 11.9 0.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 0.47 11.5 17.1 0.66 11.0 1.6 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 2.1 8.6 15.1 3.8 7.8 0.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 NODE_55655_length_309_cov_3.164234_g47720_i0reverse_frame_1 - 2.7 8.6 9.1 12 6.5 0.2 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Lamprin PF06403.11 NODE_55645_length_309_cov_5.500000_g47710_i0forward_frame_1 - 2.6 8.0 13.7 3.2 7.7 1.7 2.1 1 1 1 2 2 2 0 Lamprin CEL_III_C PF18054.1 NODE_55639_length_309_cov_45.547445_g47704_i0reverse_frame_1 - 0.0074 16.4 4.5 0.0074 16.4 4.5 1.6 2 0 0 2 2 2 1 CEL-III C-terminal ETRAMP PF09716.10 NODE_55639_length_309_cov_45.547445_g47704_i0reverse_frame_1 - 0.029 14.4 0.6 0.029 14.4 0.6 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) ADD_ATRX PF17981.1 NODE_55638_length_309_cov_48.642336_g47703_i0reverse_frame_1 - 0.093 12.6 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Cysteine Rich ADD domain DUF4606 PF15379.6 NODE_55630_length_309_cov_64.693431_g47695_i0reverse_frame_1 - 0.036 14.3 4.0 0.046 14.0 4.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4606) DUF4051 PF13260.6 NODE_55630_length_309_cov_64.693431_g47695_i0reverse_frame_1 - 3 7.7 5.1 2.4 7.9 0.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4051) zf-CXXC PF02008.20 NODE_55629_length_309_cov_64.766423_g47694_i0reverse_frame_1 - 3.4 7.8 16.8 0.088 12.8 8.8 2.2 2 0 0 2 2 2 0 CXXC zinc finger domain UPF0547 PF10571.9 NODE_55628_length_309_cov_65.072993_g47693_i0forward_frame_1 - 0.34 11.1 4.6 1 9.5 4.6 1.8 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 TrmO PF01980.16 NODE_55627_length_309_cov_66.240876_g47692_i0reverse_frame_1 - 0.18 12.0 0.0 0.2 11.9 0.0 1.2 1 0 0 1 1 1 0 tRNA-methyltransferase O s48_45 PF07422.13 NODE_55621_length_309_cov_79.062044_g47686_i0forward_frame_1 - 0.64 10.6 5.1 0.076 13.6 1.4 1.5 1 1 0 1 1 1 0 Sexual stage antigen s48/45 domain VanZ PF04892.12 NODE_55615_length_309_cov_93.799270_g47680_i0reverse_frame_1 - 0.024 15.3 2.9 0.028 15.1 2.9 1.2 1 0 0 1 1 1 0 VanZ like family APG6_N PF17675.1 NODE_55615_length_309_cov_93.799270_g47680_i0forward_frame_1 - 0.01 16.3 4.7 0.013 16.0 4.7 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region FapA PF03961.13 NODE_55615_length_309_cov_93.799270_g47680_i0forward_frame_1 - 0.16 10.5 5.3 0.2 10.3 5.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A O-ag_pol_Wzy PF14296.6 NODE_55611_length_309_cov_111.532847_g47676_i0forward_frame_1 - 0.063 11.9 1.1 0.078 11.6 1.1 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy DUF5434 PF17502.2 NODE_55611_length_309_cov_111.532847_g47676_i0forward_frame_1 - 0.11 12.5 1.0 0.13 12.2 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5434) p450 PF00067.22 NODE_55608_length_309_cov_122.645985_g47673_i0reverse_frame_1 - 2.7e-08 33.0 0.0 3.4e-08 32.7 0.0 1.2 1 0 0 1 1 1 1 Cytochrome P450 zf-RING_4 PF14570.6 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_1 - 4.4e-07 29.6 0.0 0.37 10.6 0.0 3.1 3 0 0 3 3 3 3 RING/Ubox like zinc-binding domain DUF1922 PF09082.10 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_1 - 0.008 16.4 0.0 2.7 8.4 0.0 2.5 2 1 1 3 3 3 2 Domain of unknown function (DUF1922) mTERF PF02536.14 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 2e-16 59.8 0.0 2.5e-16 59.5 0.0 1.1 1 0 0 1 1 1 1 mTERF DUF1127 PF06568.11 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.0012 18.5 0.0 1 9.2 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF1127) Inhibitor_I69 PF13734.6 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.011 16.2 0.0 51 4.4 0.0 3.1 3 0 0 3 3 3 0 Spi protease inhibitor HTH_23 PF13384.6 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.06 13.2 0.1 5.5 6.9 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain HTH_28 PF13518.6 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.067 13.3 0.0 15 5.8 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_31 PF13560.6 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.13 12.6 0.0 13 6.2 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_3 PF01381.22 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.14 12.2 0.0 31 4.7 0.1 2.8 2 0 0 2 2 2 0 Helix-turn-helix DUF3243 PF11588.8 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_1 - 0.17 12.2 0.0 21 5.5 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3243) CoA_binding_3 PF13727.6 NODE_55603_length_309_cov_176.372263_g47668_i0forward_frame_1 - 0.79 9.7 3.6 1.2 9.2 3.6 1.2 1 0 0 1 1 1 0 CoA-binding domain TMEM132D_C PF15706.5 NODE_55603_length_309_cov_176.372263_g47668_i0forward_frame_1 - 1.8 8.4 8.0 2.5 7.9 8.0 1.4 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF5592 PF17332.2 NODE_55603_length_309_cov_176.372263_g47668_i0forward_frame_1 - 4.8 7.8 8.4 4.9 7.8 6.8 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5592) LOH1CR12 PF10158.9 NODE_55602_length_309_cov_178.715328_g47667_i0reverse_frame_1 - 0.0064 16.5 0.4 0.0072 16.3 0.4 1.2 1 0 0 1 1 1 1 Tumour suppressor protein DUF842 PF05811.13 NODE_55602_length_309_cov_178.715328_g47667_i0reverse_frame_1 - 0.0079 15.9 0.9 0.013 15.2 0.9 1.3 1 1 0 1 1 1 1 Eukaryotic protein of unknown function (DUF842) ATG27 PF09451.10 NODE_55602_length_309_cov_178.715328_g47667_i0forward_frame_1 - 1.4 8.7 3.4 1.8 8.3 3.4 1.1 1 0 0 1 1 1 0 Autophagy-related protein 27 Cas_Csa5 PF09702.10 NODE_55591_length_309_cov_56435.905109_g47656_i0reverse_frame_1 - 0.062 13.5 0.1 0.082 13.2 0.1 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csa5) MFS_1 PF07690.16 NODE_55588_length_310_cov_1.214545_g47653_i0forward_frame_3 - 1.5e-11 43.8 3.6 1.6e-11 43.7 3.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Flagellar_put PF12611.8 NODE_55588_length_310_cov_1.214545_g47653_i0forward_frame_2 - 0.22 11.3 0.5 0.37 10.6 0.5 1.3 1 0 0 1 1 1 0 Putative flagellar GBP_repeat PF02526.14 NODE_55588_length_310_cov_1.214545_g47653_i0forward_frame_2 - 0.39 10.5 1.5 0.44 10.3 0.4 1.7 2 0 0 2 2 2 0 Glycophorin-binding protein DUF3737 PF12541.8 NODE_55585_length_310_cov_1.418182_g47650_i0reverse_frame_3 - 0.018 14.3 0.1 0.021 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3737) TTL PF03133.15 NODE_55585_length_310_cov_1.418182_g47650_i0reverse_frame_2 - 4.8e-18 65.3 0.0 5e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_55585_length_310_cov_1.418182_g47650_i0reverse_frame_2 - 1.8e-05 24.1 0.0 1.8e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_55585_length_310_cov_1.418182_g47650_i0reverse_frame_2 - 0.11 11.7 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Plasmid_RAQPRD PF09686.10 NODE_55584_length_310_cov_1.418182_g47649_i0reverse_frame_3 - 0.0051 17.0 0.0 0.007 16.6 0.0 1.2 1 0 0 1 1 1 1 Plasmid protein of unknown function (Plasmid_RAQPRD) DUF4094 PF13334.6 NODE_55583_length_310_cov_1.432727_g47648_i0reverse_frame_3 - 0.043 14.2 3.3 0.058 13.8 3.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) Peptidase_S49_N PF08496.10 NODE_55583_length_310_cov_1.432727_g47648_i0reverse_frame_3 - 0.5 10.4 7.3 0.62 10.1 7.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF4140 PF13600.6 NODE_55583_length_310_cov_1.432727_g47648_i0reverse_frame_3 - 2.2 8.8 7.3 0.46 10.9 1.1 2.1 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Methyltransf_28 PF02636.17 NODE_55582_length_310_cov_1.447273_g47647_i0forward_frame_2 - 2e-06 27.7 0.0 2.5e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase DUF1146 PF06612.11 NODE_55582_length_310_cov_1.447273_g47647_i0forward_frame_2 - 0.029 14.4 0.8 0.057 13.5 0.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1146) Adeno_hexon PF01065.19 NODE_55575_length_310_cov_1.730909_g47640_i0reverse_frame_2 - 0.14 11.0 0.1 0.15 10.9 0.1 1.0 1 0 0 1 1 1 0 Hexon, adenovirus major coat protein, N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks257.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks257.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks257.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks257.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Transcrip_reg PF01709.20 NODE_55574_length_310_cov_1.734545_g47639_i0reverse_frame_3 - 1.8e-35 122.5 0.1 1.9e-35 122.4 0.1 1.0 1 0 0 1 1 1 1 Transcriptional regulator TFIIB PF00382.19 NODE_55574_length_310_cov_1.734545_g47639_i0reverse_frame_3 - 0.11 12.5 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Transcription factor TFIIB repeat GATase PF00117.28 NODE_55563_length_310_cov_2.032727_g47628_i0reverse_frame_3 - 1.9e-12 47.4 0.0 2.5e-12 47.0 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 NODE_55563_length_310_cov_2.032727_g47628_i0reverse_frame_3 - 0.097 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase C26 Peptidase_M13 PF01431.21 NODE_55562_length_310_cov_2.040000_g47627_i0forward_frame_2 - 0.53 9.9 2.6 8.3 5.9 0.3 2.0 1 1 1 2 2 2 0 Peptidase family M13 Cys_rich_KTR PF14205.6 NODE_55561_length_310_cov_2.076364_g47626_i0reverse_frame_3 - 0.035 13.9 0.1 0.068 13.0 0.1 1.5 1 0 0 1 1 1 0 Cysteine-rich KTR RAB3GAP2_C PF14656.6 NODE_55561_length_310_cov_2.076364_g47626_i0reverse_frame_3 - 0.072 11.3 0.2 0.07 11.4 0.2 1.0 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit C-terminus Lamprin PF06403.11 NODE_55559_length_310_cov_2.178182_g47624_i0forward_frame_3 - 2.8 7.9 11.2 0.76 9.7 2.7 2.2 1 1 0 2 2 2 0 Lamprin DUF3481 PF11980.8 NODE_55558_length_310_cov_2.240000_g47623_i0reverse_frame_3 - 0.048 13.4 0.3 0.48 10.1 0.1 2.0 2 0 0 2 2 2 0 C-terminal domain of neuropilin glycoprotein Speriolin_C PF15059.6 NODE_55556_length_310_cov_2.280000_g47621_i0reverse_frame_3 - 0.079 13.1 0.0 6.7 6.8 0.0 2.2 2 0 0 2 2 2 0 Speriolin C-terminus Myf5 PF12232.8 NODE_55556_length_310_cov_2.280000_g47621_i0forward_frame_3 - 0.016 15.9 1.1 1.3 9.9 0.2 2.1 2 0 0 2 2 2 0 Myogenic determination factor 5 DUF1619 PF07773.11 NODE_55552_length_310_cov_2.309091_g47617_i0reverse_frame_3 - 4e-06 27.0 4.8 4.3e-06 26.9 4.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1619) DUF4082 PF13313.6 NODE_55552_length_310_cov_2.309091_g47617_i0reverse_frame_3 - 0.0065 16.5 0.7 0.0088 16.1 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4082) AAA PF00004.29 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 1.1e-10 42.0 0.1 1.9e-10 41.2 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TIP49 PF06068.13 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.00014 21.2 0.0 0.00015 21.1 0.0 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_5 PF07728.14 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.0036 17.3 0.1 0.0054 16.7 0.1 1.3 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.0046 17.4 0.1 0.0058 17.0 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain Mg_chelatase PF01078.21 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.006 16.0 0.1 0.0079 15.6 0.1 1.2 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.0062 16.3 0.4 0.0081 15.9 0.4 1.4 1 1 0 1 1 1 1 IstB-like ATP binding protein TrpBP PF02081.15 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.0067 16.2 0.0 0.01 15.7 0.0 1.2 1 0 0 1 1 1 1 Tryptophan RNA-binding attenuator protein RuvB_N PF05496.12 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.007 16.1 0.0 0.0072 16.1 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.011 16.0 0.1 0.018 15.3 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.013 15.6 0.1 0.019 15.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.029 14.4 0.0 0.042 13.9 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.032 13.7 0.4 0.045 13.2 0.4 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_17 PF13207.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.034 14.6 0.1 0.064 13.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.072 12.8 0.3 0.17 11.6 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.081 13.2 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.11 12.0 0.4 0.24 10.9 0.1 1.6 1 1 1 2 2 2 0 P-loop containing dynein motor region AAA_25 PF13481.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.14 11.7 0.1 0.16 11.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.15 11.3 0.1 0.17 11.2 0.1 1.3 1 1 0 1 1 1 0 KaiC AAA_18 PF13238.6 NODE_55551_length_310_cov_2.425455_g47616_i0forward_frame_2 - 0.22 12.1 0.1 0.52 10.9 0.1 1.6 2 0 0 2 2 2 0 AAA domain DNA_methylase PF00145.17 NODE_55545_length_310_cov_2.592727_g47610_i0forward_frame_2 - 0.26 10.6 0.0 0.26 10.6 0.0 1.0 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Kelch_1 PF01344.25 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 4.8e-10 38.8 0.0 1.9e-05 24.1 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 4.7e-05 23.3 0.0 0.0015 18.4 0.0 2.2 2 0 0 2 2 2 1 Kelch motif Kelch_2 PF07646.15 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 7.3e-05 22.6 0.0 0.33 11.0 0.0 2.3 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 9.3e-05 22.6 0.1 0.044 14.1 0.0 2.2 1 1 1 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 0.00033 20.6 0.2 0.067 13.2 0.0 2.5 2 1 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_55541_length_310_cov_2.821818_g47606_i0forward_frame_3 - 0.011 16.0 0.0 0.29 11.5 0.0 2.2 2 0 0 2 2 2 0 Galactose oxidase, central domain BCCT PF02028.17 NODE_55537_length_310_cov_3.069091_g47602_i0reverse_frame_3 - 3.5e-22 78.5 2.9 3.7e-22 78.5 2.9 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter DUF2867 PF11066.8 NODE_55536_length_310_cov_3.141818_g47601_i0forward_frame_3 - 3e-05 24.4 0.0 3.3e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2867) DUSP PF06337.12 NODE_55534_length_310_cov_3.443636_g47599_i0forward_frame_3 - 1.3e-09 38.5 1.0 1.7e-09 38.1 1.0 1.2 1 0 0 1 1 1 1 DUSP domain CM2 PF03021.14 NODE_55533_length_310_cov_3.552727_g47598_i0reverse_frame_2 - 1.2 8.9 4.5 1 9.2 3.3 1.5 1 1 0 1 1 1 0 Influenza C virus M2 protein Bac_export_2 PF01312.19 NODE_55530_length_310_cov_3.658182_g47595_i0forward_frame_2 - 4.9 6.3 5.5 5.7 6.0 5.5 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family CDC73_N PF16050.5 NODE_55529_length_310_cov_3.774545_g47594_i0reverse_frame_2 - 8.1e-12 45.1 1.4 9.4e-12 44.8 1.4 1.0 1 0 0 1 1 1 1 Paf1 complex subunit CDC73 N-terminal Galanin PF01296.18 NODE_55527_length_310_cov_8.429091_g47592_i0reverse_frame_3 - 0.056 13.4 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 Galanin DUF4452 PF14618.6 NODE_55526_length_310_cov_9.327273_g47591_i0reverse_frame_3 - 0.024 14.5 0.9 0.023 14.6 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4452) FSA_C PF10479.9 NODE_55525_length_310_cov_36.229091_g47590_i0reverse_frame_3 - 0.025 12.7 0.1 0.03 12.5 0.1 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Phage_BR0599 PF09356.10 NODE_55525_length_310_cov_36.229091_g47590_i0forward_frame_3 - 1.5 9.2 4.9 0.58 10.5 0.9 2.0 1 1 0 2 2 2 0 Phage conserved hypothetical protein BR0599 ICAM_N PF03921.14 NODE_55525_length_310_cov_36.229091_g47590_i0forward_frame_2 - 0.053 13.2 0.8 0.07 12.8 0.8 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain Cadherin_C_2 PF16492.5 NODE_55521_length_310_cov_43.843636_g47586_i0reverse_frame_2 - 0.028 15.2 2.1 0.028 15.2 2.1 2.1 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal DUF4637 PF15470.6 NODE_55521_length_310_cov_43.843636_g47586_i0forward_frame_2 - 0.1 12.3 2.2 0.14 11.9 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Transformer PF06495.11 NODE_55520_length_310_cov_44.556364_g47585_i0forward_frame_3 - 5.1 7.2 20.7 6.9 6.7 20.7 1.3 1 0 0 1 1 1 0 Fruit fly transformer protein HCO3_cotransp PF00955.21 NODE_55518_length_310_cov_50.712727_g47583_i0reverse_frame_3 - 0.0069 15.3 0.4 0.0078 15.1 0.4 1.1 1 0 0 1 1 1 1 HCO3- transporter family zf_C2H2_10 PF18414.1 NODE_55518_length_310_cov_50.712727_g47583_i0reverse_frame_2 - 0.25 10.9 1.6 0.35 10.5 0.0 1.9 2 0 0 2 2 2 0 C2H2 type zinc-finger DUF2816 PF10992.8 NODE_55518_length_310_cov_50.712727_g47583_i0forward_frame_2 - 0.014 15.2 0.1 0.025 14.5 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2816) TsaE PF02367.17 NODE_55518_length_310_cov_50.712727_g47583_i0forward_frame_2 - 0.094 12.7 0.2 0.14 12.2 0.2 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE CM2 PF03021.14 NODE_55517_length_310_cov_51.501818_g47582_i0forward_frame_3 - 0.056 13.3 0.0 0.069 13.0 0.0 1.2 1 0 0 1 1 1 0 Influenza C virus M2 protein SSP160 PF06933.11 NODE_55513_length_310_cov_60.261818_g47578_i0reverse_frame_3 - 2.2 6.4 9.6 2.5 6.2 9.6 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF5323 PF17257.2 NODE_55508_length_310_cov_65.898182_g47573_i0forward_frame_3 - 0.21 11.5 1.1 1.7 8.5 0.7 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5323) DUF359 PF04019.12 NODE_55507_length_310_cov_67.640000_g47572_i0reverse_frame_2 - 0.11 12.1 0.5 0.15 11.7 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF359) PA26 PF04636.13 NODE_55507_length_310_cov_67.640000_g47572_i0reverse_frame_2 - 1.2 7.9 6.3 1.4 7.8 6.3 1.0 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) MTCP1 PF08991.10 NODE_55507_length_310_cov_67.640000_g47572_i0forward_frame_2 - 0.21 11.8 3.9 0.33 11.2 3.9 1.3 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type DUF4882 PF16223.5 NODE_55506_length_310_cov_69.640000_g47571_i0reverse_frame_3 - 0.014 14.7 1.9 0.015 14.6 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4882) Sec62 PF03839.16 NODE_55506_length_310_cov_69.640000_g47571_i0reverse_frame_3 - 4.6 6.7 7.9 5.3 6.5 7.9 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 CaKB PF03185.15 NODE_55503_length_310_cov_72.189091_g47568_i0reverse_frame_2 - 0.034 13.8 1.0 0.045 13.4 1.0 1.1 1 0 0 1 1 1 0 Calcium-activated potassium channel, beta subunit DUF2614 PF11023.8 NODE_55503_length_310_cov_72.189091_g47568_i0forward_frame_3 - 0.013 15.6 4.9 0.5 10.5 0.1 2.1 1 1 1 2 2 2 0 Zinc-ribbon containing domain DUF4215 PF13948.6 NODE_55503_length_310_cov_72.189091_g47568_i0forward_frame_3 - 0.018 15.5 1.2 0.018 15.5 1.2 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4215) VSP PF03302.13 NODE_55503_length_310_cov_72.189091_g47568_i0forward_frame_3 - 0.027 13.4 12.5 0.034 13.0 12.5 1.1 1 0 0 1 1 1 0 Giardia variant-specific surface protein CBM_14 PF01607.24 NODE_55503_length_310_cov_72.189091_g47568_i0forward_frame_3 - 0.068 13.3 17.4 0.95 9.7 6.3 2.6 1 1 1 2 2 2 0 Chitin binding Peritrophin-A domain preSET_CXC PF18264.1 NODE_55503_length_310_cov_72.189091_g47568_i0forward_frame_2 - 0.24 11.9 7.0 0.69 10.4 7.0 1.8 1 0 0 1 1 1 0 CXC domain Methyltransf_12 PF08242.12 NODE_55502_length_310_cov_73.403636_g47567_i0reverse_frame_2 - 4.8e-06 27.2 0.0 6e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_55502_length_310_cov_73.403636_g47567_i0reverse_frame_2 - 0.0017 19.0 0.0 0.0019 18.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_55502_length_310_cov_73.403636_g47567_i0reverse_frame_2 - 0.0079 16.0 0.0 0.0091 15.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_55502_length_310_cov_73.403636_g47567_i0reverse_frame_2 - 0.032 14.9 0.1 0.039 14.6 0.1 1.1 1 0 0 1 1 1 0 Methyltransferase domain Antimicrobial_2 PF08023.12 NODE_55501_length_310_cov_79.003636_g47566_i0forward_frame_2 - 0.15 12.6 0.9 0.15 12.6 0.9 1.6 2 0 0 2 2 2 0 Frog antimicrobial peptide Tlr3_TMD PF17968.1 NODE_55500_length_310_cov_81.745455_g47565_i0forward_frame_3 - 0.092 12.9 0.1 0.16 12.2 0.1 1.4 1 0 0 1 1 1 0 Toll-like receptor 3 trans-membrane domain ATP-synt_8 PF00895.20 NODE_55499_length_310_cov_82.069091_g47564_i0forward_frame_2 - 7.2 7.2 7.1 2.5 8.6 1.8 2.6 2 1 1 3 3 3 0 ATP synthase protein 8 Amnionless PF14828.6 NODE_55497_length_310_cov_84.076364_g47562_i0reverse_frame_2 - 0.35 9.7 0.0 0.35 9.7 0.0 2.0 2 0 0 2 2 2 0 Amnionless DNA_ligase_aden PF01653.18 NODE_55495_length_310_cov_87.032727_g47560_i0reverse_frame_3 - 0.1 11.6 0.0 0.16 11.0 0.0 1.3 1 0 0 1 1 1 0 NAD-dependent DNA ligase adenylation domain FBPase_glpX PF03320.13 NODE_55495_length_310_cov_87.032727_g47560_i0forward_frame_3 - 0.23 10.3 0.1 0.27 10.0 0.1 1.0 1 0 0 1 1 1 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DUF5081 PF16887.5 NODE_55489_length_310_cov_101.978182_g47554_i0forward_frame_3 - 0.12 11.4 0.7 0.13 11.3 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5081) Multi_Drug_Res PF00893.19 NODE_55486_length_310_cov_122.323636_g47551_i0reverse_frame_3 - 0.029 15.0 0.1 0.034 14.8 0.1 1.2 1 0 0 1 1 1 0 Small Multidrug Resistance protein Ribosomal_L31 PF01197.18 NODE_55486_length_310_cov_122.323636_g47551_i0reverse_frame_2 - 0.013 15.7 0.4 0.021 15.0 0.4 1.4 1 0 0 1 1 1 0 Ribosomal protein L31 Cation_ATPase_C PF00689.21 NODE_55485_length_310_cov_122.720000_g47550_i0reverse_frame_3 - 0.61 9.8 13.0 0.71 9.6 13.0 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF4227 PF14004.6 NODE_55485_length_310_cov_122.720000_g47550_i0reverse_frame_2 - 0.25 11.3 1.1 0.48 10.4 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) PRP1_N PF06424.12 NODE_55485_length_310_cov_122.720000_g47550_i0forward_frame_3 - 1.3 9.4 8.8 1.7 9.1 8.8 1.2 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal SpoU_methylase PF00588.19 NODE_55484_length_310_cov_124.905455_g47549_i0reverse_frame_2 - 7.2e-18 65.1 0.0 8.3e-18 64.9 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family DUF1077 PF06417.12 NODE_55482_length_310_cov_136.574545_g47547_i0reverse_frame_3 - 0.057 13.4 2.0 0.062 13.3 0.8 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1077) PPR_2 PF13041.6 NODE_55481_length_310_cov_157.680000_g47546_i0forward_frame_2 - 0.014 15.6 0.0 0.62 10.3 0.0 2.1 1 1 1 2 2 2 0 PPR repeat family DUF5110 PF17137.4 NODE_55477_length_310_cov_341.963636_g47542_i0reverse_frame_3 - 0.026 14.8 1.1 0.05 13.9 1.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5110) Glycolipid_bind PF06475.11 NODE_55462_length_311_cov_1.626812_g47527_i0reverse_frame_2 - 0.15 11.6 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 Putative glycolipid-binding Vps53_N PF04100.12 NODE_55460_length_311_cov_1.844203_g47525_i0reverse_frame_3 - 0.00018 20.6 0.0 0.0003 19.9 0.0 1.3 1 0 0 1 1 1 1 Vps53-like, N-terminal COG7 PF10191.9 NODE_55460_length_311_cov_1.844203_g47525_i0reverse_frame_3 - 0.0039 15.5 0.3 0.0043 15.4 0.3 1.0 1 0 0 1 1 1 1 Golgi complex component 7 (COG7) Melibiase_2 PF16499.5 NODE_55460_length_311_cov_1.844203_g47525_i0reverse_frame_3 - 0.12 11.5 0.0 0.14 11.3 0.0 1.0 1 0 0 1 1 1 0 Alpha galactosidase A LisH_2 PF16045.5 NODE_55456_length_311_cov_1.902174_g47521_i0forward_frame_3 - 0.089 11.8 0.1 0.14 11.2 0.1 1.3 1 0 0 1 1 1 0 LisH SMN PF06003.12 NODE_55453_length_311_cov_1.963768_g47518_i0reverse_frame_3 - 0.83 8.9 5.5 0.95 8.7 5.5 1.2 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) RL PF17797.1 NODE_55452_length_311_cov_1.978261_g47517_i0forward_frame_3 - 0.14 12.1 0.2 0.18 11.8 0.2 1.1 1 0 0 1 1 1 0 RL domain p450 PF00067.22 NODE_55450_length_311_cov_1.992754_g47515_i0reverse_frame_3 - 2.6e-11 42.9 0.0 3.1e-11 42.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 EcoRI PF02963.16 NODE_55450_length_311_cov_1.992754_g47515_i0reverse_frame_3 - 0.061 12.3 0.1 0.07 12.1 0.1 1.1 1 0 0 1 1 1 0 Restriction endonuclease EcoRI RCC1 PF00415.18 NODE_55442_length_311_cov_2.177536_g47507_i0reverse_frame_2 - 2.1e-19 69.9 0.9 1.7e-15 57.4 0.1 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_55442_length_311_cov_2.177536_g47507_i0reverse_frame_2 - 1.1e-10 41.0 1.5 1.4e-06 27.9 0.3 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF1433 PF07252.11 NODE_55441_length_311_cov_2.210145_g47506_i0reverse_frame_2 - 0.094 13.0 0.3 0.15 12.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1433) Cnl2_NKP2 PF09447.10 NODE_55439_length_311_cov_2.297101_g47504_i0reverse_frame_2 - 0.041 14.0 0.3 0.089 13.0 0.2 1.7 1 1 0 1 1 1 0 Cnl2/NKP2 family protein Nuc_N PF14448.6 NODE_55439_length_311_cov_2.297101_g47504_i0reverse_frame_2 - 0.078 12.8 7.1 1.1 9.1 1.0 2.3 1 1 1 2 2 2 0 Nuclease N terminal Herpes_UL73 PF03554.13 NODE_55438_length_311_cov_2.304348_g47503_i0forward_frame_3 - 0.019 15.0 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein PBP_sp32 PF07222.12 NODE_55436_length_311_cov_2.333333_g47501_i0forward_frame_3 - 0.14 11.6 0.2 0.14 11.6 0.2 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 DUF5313 PF17240.2 NODE_55433_length_311_cov_2.460145_g47498_i0reverse_frame_3 - 0.21 12.0 1.2 0.23 11.9 1.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5313) SPOC PF07744.13 NODE_55433_length_311_cov_2.460145_g47498_i0reverse_frame_2 - 0.041 13.8 0.0 0.048 13.6 0.0 1.1 1 0 0 1 1 1 0 SPOC domain DUF3989 PF13150.6 NODE_55429_length_311_cov_2.695652_g47494_i0reverse_frame_2 - 0.17 11.7 2.7 0.24 11.2 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) RVT_1 PF00078.27 NODE_55428_length_311_cov_2.735507_g47493_i0reverse_frame_3 - 0.00055 19.5 0.0 0.0006 19.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) KAAG1 PF15354.6 NODE_55428_length_311_cov_2.735507_g47493_i0reverse_frame_2 - 1.1 9.8 9.3 1.2 9.7 8.4 1.5 1 1 0 1 1 1 0 Kidney-associated antigen 1 Glyco_transf_34 PF05637.12 NODE_55427_length_311_cov_2.782609_g47492_i0reverse_frame_3 - 0.012 15.4 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family DUF2892 PF11127.8 NODE_55427_length_311_cov_2.782609_g47492_i0forward_frame_3 - 0.53 10.3 5.1 1.3 9.2 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) DUF4807 PF16065.5 NODE_55427_length_311_cov_2.782609_g47492_i0forward_frame_2 - 0.12 12.0 0.1 0.16 11.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4807) Thx PF17070.5 NODE_55425_length_311_cov_2.923913_g47490_i0forward_frame_3 - 0.011 15.8 0.6 0.028 14.5 0.6 1.7 1 0 0 1 1 1 0 30S ribosomal protein Thx DUF1645 PF07816.11 NODE_55423_length_311_cov_3.068841_g47488_i0reverse_frame_3 - 0.083 13.5 0.1 0.083 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1645) DUF986 PF06173.12 NODE_55423_length_311_cov_3.068841_g47488_i0forward_frame_3 - 4.8e-44 150.0 1.2 5.2e-44 149.9 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF986) Proton_antipo_M PF00361.20 NODE_55420_length_311_cov_3.355072_g47485_i0reverse_frame_3 - 2.7e-18 66.2 1.3 3.1e-18 66.0 1.3 1.0 1 0 0 1 1 1 1 Proton-conducting membrane transporter DUF3623 PF12291.8 NODE_55420_length_311_cov_3.355072_g47485_i0reverse_frame_3 - 0.0092 15.2 0.1 0.011 15.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3623) Sdh_cyt PF01127.22 NODE_55420_length_311_cov_3.355072_g47485_i0reverse_frame_3 - 0.038 14.0 1.0 0.05 13.6 1.0 1.1 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF2208 PF09973.9 NODE_55420_length_311_cov_3.355072_g47485_i0reverse_frame_3 - 0.1 12.2 1.1 0.12 12.0 1.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) Apis_Csd PF11671.8 NODE_55419_length_311_cov_3.757246_g47484_i0forward_frame_3 - 0.017 15.1 0.9 0.019 15.0 0.9 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein Phage_Nu1 PF07471.12 NODE_55418_length_311_cov_3.764493_g47483_i0forward_frame_3 - 1.2e-52 178.0 1.5 1.3e-52 177.9 1.5 1.0 1 0 0 1 1 1 1 Phage DNA packaging protein Nu1 CNOT11 PF10155.9 NODE_55417_length_311_cov_4.181159_g47482_i0reverse_frame_3 - 1.9 8.6 7.8 4.1 7.6 1.0 2.8 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 11 CNOT11 PF10155.9 NODE_55417_length_311_cov_4.181159_g47482_i0reverse_frame_2 - 1.3 9.2 11.4 1.8 8.7 0.9 3.1 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 11 SpvD PF05563.12 NODE_55417_length_311_cov_4.181159_g47482_i0reverse_frame_2 - 3.8 7.1 12.8 0.038 13.6 3.0 1.9 1 1 0 2 2 2 0 Salmonella plasmid virulence protein SpvD C_tripleX PF02363.19 NODE_55411_length_311_cov_52.369565_g47476_i0forward_frame_3 - 0.0065 16.7 4.3 0.011 15.9 4.3 1.4 1 0 0 1 1 1 1 Cysteine rich repeat Put_DNA-bind_N PF06971.13 NODE_55410_length_311_cov_55.797101_g47475_i0reverse_frame_2 - 0.044 13.8 0.0 0.066 13.2 0.0 1.2 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus EamA PF00892.20 NODE_55406_length_311_cov_66.148551_g47471_i0reverse_frame_3 - 1.2e-11 44.9 2.1 1.5e-11 44.6 2.1 1.1 1 0 0 1 1 1 1 EamA-like transporter family Nuc_sug_transp PF04142.15 NODE_55406_length_311_cov_66.148551_g47471_i0reverse_frame_3 - 0.0094 15.1 0.0 0.011 14.9 0.0 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter PUNUT PF16913.5 NODE_55406_length_311_cov_66.148551_g47471_i0reverse_frame_3 - 0.022 14.0 0.0 0.027 13.7 0.0 1.1 1 0 0 1 1 1 0 Purine nucleobase transmembrane transport Mg_trans_NIPA PF05653.14 NODE_55406_length_311_cov_66.148551_g47471_i0reverse_frame_3 - 0.13 11.3 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Magnesium transporter NIPA TRAP_alpha PF03896.16 NODE_55406_length_311_cov_66.148551_g47471_i0forward_frame_2 - 0.23 10.6 0.1 0.3 10.3 0.1 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit DRY_EERY PF09750.9 NODE_55405_length_311_cov_66.293478_g47470_i0forward_frame_3 - 0.16 12.3 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Alternative splicing regulator MLANA PF14991.6 NODE_55405_length_311_cov_66.293478_g47470_i0forward_frame_2 - 0.12 12.7 2.1 0.089 13.1 0.6 1.5 1 1 1 2 2 2 0 Protein melan-A ACT_4 PF13291.6 NODE_55404_length_311_cov_70.438406_g47469_i0reverse_frame_2 - 0.092 13.3 1.4 0.15 12.6 1.4 1.3 1 0 0 1 1 1 0 ACT domain AHD PF17793.1 NODE_55403_length_311_cov_70.681159_g47468_i0forward_frame_3 - 0.052 13.4 0.3 0.089 12.6 0.3 1.3 1 0 0 1 1 1 0 ANC1 homology domain (AHD) DUF1013 PF06242.11 NODE_55403_length_311_cov_70.681159_g47468_i0forward_frame_2 - 0.056 13.5 0.4 0.074 13.1 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1013) Ank_2 PF12796.7 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 6.7e-24 84.3 0.7 9.1e-13 48.6 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 8.1e-18 64.3 0.1 8.7e-09 35.5 0.0 2.5 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 1.1e-16 60.4 0.1 2.1e-05 24.8 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 2.2e-12 47.2 0.1 1.1e-08 35.5 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 5e-10 38.8 0.0 0.0055 17.1 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat YlzJ PF14035.6 NODE_55397_length_311_cov_82.637681_g47462_i0reverse_frame_2 - 0.00029 21.0 0.0 2.7 8.3 0.0 3.1 2 1 1 3 3 3 2 YlzJ-like protein Resistin PF06954.11 NODE_55396_length_311_cov_84.876812_g47461_i0forward_frame_3 - 0.062 13.9 4.0 1.6 9.4 0.3 2.1 1 1 1 2 2 2 0 Resistin STG PF15809.5 NODE_55396_length_311_cov_84.876812_g47461_i0forward_frame_2 - 0.11 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Simian taste bud-specific gene product family PRORP PF16953.5 NODE_55392_length_311_cov_88.329710_g47457_i0reverse_frame_3 - 0.017 14.7 0.1 0.02 14.5 0.1 1.0 1 0 0 1 1 1 0 Protein-only RNase P DUF3446 PF11928.8 NODE_55390_length_311_cov_95.231884_g47455_i0reverse_frame_2 - 0.0097 16.2 4.6 0.012 15.9 4.6 1.2 1 0 0 1 1 1 1 Early growth response N-terminal domain Fer4_11 PF13247.6 NODE_55386_length_311_cov_104.047101_g47451_i0reverse_frame_3 - 0.02 15.0 1.1 0.039 14.1 1.1 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain VF530 PF09905.9 NODE_55381_length_311_cov_146.684783_g47446_i0reverse_frame_2 - 0.1 12.8 0.1 0.16 12.2 0.1 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 PSP1 PF04468.12 NODE_55381_length_311_cov_146.684783_g47446_i0forward_frame_2 - 0.099 12.9 0.5 0.13 12.5 0.5 1.2 1 0 0 1 1 1 0 PSP1 C-terminal conserved region Histone_H2A_C PF16211.5 NODE_55381_length_311_cov_146.684783_g47446_i0forward_frame_2 - 1.1 9.0 5.6 1.9 8.3 5.6 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A RPS31 PF17067.5 NODE_55380_length_311_cov_176.391304_g47445_i0reverse_frame_3 - 0.7 10.1 4.5 0.21 11.7 0.4 1.8 1 1 1 2 2 2 0 Ribosomal protein S31e DUF4656 PF15551.6 NODE_55379_length_311_cov_178.144928_g47444_i0forward_frame_2 - 7 6.1 6.6 7.4 6.0 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) Phage_RpbA PF10789.9 NODE_55376_length_311_cov_241.028986_g47441_i0forward_frame_2 - 0.049 13.7 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Phage RNA polymerase binding, RpbA HhH-GPD PF00730.25 NODE_55373_length_311_cov_272.271739_g47438_i0forward_frame_3 - 0.027 14.9 0.0 0.033 14.6 0.0 1.3 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein DUF5622 PF18533.1 NODE_55373_length_311_cov_272.271739_g47438_i0forward_frame_3 - 0.068 13.3 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5622) NAD_binding_7 PF13241.6 NODE_55373_length_311_cov_272.271739_g47438_i0forward_frame_3 - 0.085 13.3 0.0 0.093 13.2 0.0 1.2 1 0 0 1 1 1 0 Putative NAD(P)-binding DicB PF05358.11 NODE_55371_length_311_cov_509.931159_g47436_i0reverse_frame_3 - 0.18 12.0 0.2 0.29 11.3 0.2 1.3 1 0 0 1 1 1 0 DicB protein zf-RING_11 PF17123.5 NODE_55371_length_311_cov_509.931159_g47436_i0reverse_frame_3 - 0.42 10.4 1.8 0.8 9.5 1.8 1.4 1 0 0 1 1 1 0 RING-like zinc finger DUF2116 PF09889.9 NODE_55370_length_311_cov_2048.931159_g47435_i0reverse_frame_2 - 0.81 9.7 3.1 3.4 7.7 0.9 2.1 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Hormone_1 PF00103.20 NODE_55369_length_311_cov_2211.036232_g47434_i0forward_frame_2 - 0.026 14.3 1.0 0.034 13.9 1.0 1.2 1 0 0 1 1 1 0 Somatotropin hormone family Ost4 PF10215.9 NODE_55368_length_311_cov_2305.735507_g47433_i0forward_frame_2 - 0.036 13.9 0.0 0.036 13.9 0.0 1.5 2 0 0 2 2 2 0 Oligosaccaryltransferase GnsAB_toxin PF08178.11 NODE_55367_length_311_cov_5216.112319_g47432_i0reverse_frame_2 - 0.011 15.7 0.3 0.018 15.0 0.3 1.4 1 0 0 1 1 1 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system BAP PF06639.11 NODE_55367_length_311_cov_5216.112319_g47432_i0forward_frame_2 - 0.94 9.9 3.1 10 6.5 0.5 2.3 2 1 0 2 2 2 0 Basal layer antifungal peptide (BAP) Sensor_TM1 PF13755.6 NODE_55360_length_312_cov_1.328520_g47425_i0forward_frame_2 - 0.16 11.8 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain CrgA PF06781.12 NODE_55359_length_312_cov_1.346570_g47424_i0forward_frame_3 - 0.11 12.6 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Cell division protein CrgA hGDE_N PF14699.6 NODE_55358_length_312_cov_1.440433_g47423_i0forward_frame_2 - 0.095 12.8 0.2 0.13 12.4 0.2 1.3 1 0 0 1 1 1 0 N-terminal domain from the human glycogen debranching enzyme PriA_CRR PF18319.1 NODE_55357_length_312_cov_1.444043_g47422_i0reverse_frame_3 - 0.56 10.2 4.7 2.5 8.2 0.3 2.8 3 0 0 3 3 3 0 PriA DNA helicase Cys-rich region (CRR) domain MogR_DNAbind PF12181.8 NODE_55357_length_312_cov_1.444043_g47422_i0reverse_frame_2 - 0.016 15.1 1.2 0.018 14.9 1.2 1.2 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) 30K_MP_core PF17644.1 NODE_55357_length_312_cov_1.444043_g47422_i0forward_frame_3 - 0.017 15.0 0.2 0.024 14.5 0.2 1.2 1 0 0 1 1 1 0 Core domain of 30K viral movement proteins RPA_interact_M PF14767.6 NODE_55351_length_312_cov_1.602888_g47416_i0forward_frame_2 - 0.038 14.6 0.0 0.044 14.3 0.0 1.2 1 0 0 1 1 1 0 Replication protein A interacting middle NB-LRR PF12061.8 NODE_55349_length_312_cov_1.642599_g47414_i0reverse_frame_2 - 0.002 17.5 0.1 0.0023 17.3 0.1 1.0 1 0 0 1 1 1 1 Late blight resistance protein R1 RVT_1 PF00078.27 NODE_55349_length_312_cov_1.642599_g47414_i0forward_frame_3 - 0.0029 17.1 0.0 0.018 14.5 0.0 1.9 1 1 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Herpes_capsid PF06112.11 NODE_55349_length_312_cov_1.642599_g47414_i0forward_frame_2 - 6.5 6.8 6.5 7 6.7 6.5 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein CCDC144C PF14915.6 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.00042 19.5 14.7 0.00048 19.4 14.7 1.1 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region MscS_porin PF12795.7 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.00093 18.8 14.9 0.0015 18.2 14.9 1.4 1 1 0 1 1 1 1 Mechanosensitive ion channel porin domain Bcr-Abl_Oligo PF09036.10 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.13 12.3 1.3 0.54 10.3 0.2 2.1 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain PEP-utilisers_N PF05524.13 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.17 12.1 3.3 0.26 11.5 3.3 1.5 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal Golgin_A5 PF09787.9 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.28 10.6 15.4 0.31 10.5 15.4 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 HAUS6_N PF14661.6 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 0.69 9.4 9.8 0.75 9.3 9.8 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF745 PF05335.13 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 1 9.0 12.3 3.5 7.3 1.1 2.0 1 1 0 2 2 2 0 Protein of unknown function (DUF745) Spc7 PF08317.11 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 2 7.2 15.6 2.3 7.0 15.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein XhlA PF10779.9 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 2.2 8.5 6.6 0.39 10.9 2.6 1.8 2 1 0 2 2 2 0 Haemolysin XhlA FapA PF03961.13 NODE_55346_length_312_cov_1.725632_g47411_i0reverse_frame_2 - 2.3 6.7 11.9 2.5 6.6 11.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF620 PF04788.12 NODE_55344_length_312_cov_1.729242_g47409_i0reverse_frame_3 - 0.13 11.7 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF620) Deltaretro_Tax PF05599.11 NODE_55340_length_312_cov_1.812274_g47405_i0reverse_frame_2 - 0.026 15.0 1.1 0.026 15.0 1.1 2.0 2 0 0 2 2 2 0 Deltaretrovirus Tax protein DUF3489 PF11994.8 NODE_55340_length_312_cov_1.812274_g47405_i0reverse_frame_2 - 0.13 12.3 0.1 0.31 11.1 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) DUF963 PF06131.11 NODE_55340_length_312_cov_1.812274_g47405_i0forward_frame_3 - 0.12 11.8 5.9 3 7.4 0.6 2.4 2 0 0 2 2 2 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) S1 PF00575.23 NODE_55339_length_312_cov_1.924188_g47404_i0forward_frame_3 - 0.05 14.0 0.1 0.067 13.5 0.1 1.2 1 0 0 1 1 1 0 S1 RNA binding domain RVT_2 PF07727.14 NODE_55338_length_312_cov_1.938628_g47403_i0reverse_frame_3 - 2.5e-05 24.0 0.0 3.8e-05 23.4 0.0 1.3 1 1 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF2207 PF09972.9 NODE_55336_length_312_cov_2.061372_g47401_i0forward_frame_2 - 0.0063 15.3 0.0 0.0064 15.3 0.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) PIRT PF15099.6 NODE_55336_length_312_cov_2.061372_g47401_i0forward_frame_2 - 0.047 13.3 0.0 0.05 13.2 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Tho2 PF11262.8 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.0019 17.5 4.5 0.002 17.4 4.5 1.0 1 0 0 1 1 1 1 Transcription factor/nuclear export subunit protein 2 DUF3450 PF11932.8 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.0049 16.2 1.3 0.0058 16.0 1.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) FlxA PF14282.6 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.012 15.6 1.1 0.014 15.3 1.1 1.3 1 0 0 1 1 1 0 FlxA-like protein Peptidase_M41 PF01434.18 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.024 14.5 0.2 0.03 14.2 0.2 1.1 1 0 0 1 1 1 0 Peptidase family M41 Fib_alpha PF08702.10 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.081 13.1 4.6 0.073 13.3 2.2 1.8 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 NODE_55334_length_312_cov_2.079422_g47399_i0reverse_frame_2 - 0.096 12.7 1.0 0.13 12.3 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2101 PF09874.9 NODE_55334_length_312_cov_2.079422_g47399_i0forward_frame_3 - 4.3 7.0 10.5 5.9 6.5 10.5 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Aminopep PF10023.9 NODE_55332_length_312_cov_2.111913_g47397_i0reverse_frame_3 - 0.061 12.7 4.3 0.066 12.6 4.3 1.0 1 0 0 1 1 1 0 Putative aminopeptidase Pex24p PF06398.11 NODE_55332_length_312_cov_2.111913_g47397_i0forward_frame_2 - 0.54 9.2 8.0 0.61 9.0 8.0 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Inhibitor_I42 PF09394.10 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 0.18 12.3 0.1 3.1 8.3 0.0 2.1 2 0 0 2 2 2 0 Chagasin family peptidase inhibitor I42 PRD1_DD PF11087.8 NODE_55330_length_312_cov_2.267148_g47395_i0reverse_frame_3 - 0.22 11.2 0.3 11 5.8 0.0 2.1 2 0 0 2 2 2 0 PRD1 phage membrane DNA delivery GPR15L PF15854.5 NODE_55328_length_312_cov_2.707581_g47393_i0forward_frame_2 - 0.043 14.0 7.8 0.065 13.5 7.8 1.3 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 DUF3450 PF11932.8 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 0.044 13.1 8.8 0.057 12.7 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1501 PF07394.12 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 0.089 11.8 1.9 0.1 11.7 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) CSRNP_N PF16019.5 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 2.5 8.0 7.0 2.7 7.8 7.0 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Atg14 PF10186.9 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 3.2 6.8 14.4 3.8 6.5 14.4 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Sec62 PF03839.16 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 5.4 6.5 10.0 5.7 6.4 10.0 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 TMPIT PF07851.13 NODE_55327_length_312_cov_2.747292_g47392_i0forward_frame_3 - 9.1 5.4 7.7 9.6 5.3 7.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein RVT_1 PF00078.27 NODE_55325_length_312_cov_2.859206_g47390_i0forward_frame_3 - 2.4e-14 53.4 0.0 2.9e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) SulA PF03846.14 NODE_55324_length_312_cov_2.967509_g47389_i0forward_frame_3 - 7.1e-30 103.3 0.9 9.9e-30 102.8 0.9 1.2 1 0 0 1 1 1 1 Cell division inhibitor SulA Zn_Tnp_IS91 PF14319.6 NODE_55322_length_312_cov_2.981949_g47387_i0reverse_frame_3 - 0.016 15.2 0.4 0.021 14.8 0.4 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain ORC6 PF05460.13 NODE_55322_length_312_cov_2.981949_g47387_i0reverse_frame_2 - 0.22 10.8 12.1 0.24 10.6 12.1 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) DUF3450 PF11932.8 NODE_55322_length_312_cov_2.981949_g47387_i0reverse_frame_2 - 0.33 10.2 6.4 0.35 10.1 6.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4337 PF14235.6 NODE_55322_length_312_cov_2.981949_g47387_i0reverse_frame_2 - 2.9 8.0 7.8 3.5 7.7 7.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) TMPIT PF07851.13 NODE_55322_length_312_cov_2.981949_g47387_i0reverse_frame_2 - 3.2 6.9 8.9 3.6 6.7 8.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein TAFH PF07531.14 NODE_55321_length_312_cov_3.075812_g47386_i0reverse_frame_2 - 0.13 12.4 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 NHR1 homology to TAF MetW PF07021.12 NODE_55316_length_312_cov_4.032491_g47381_i0forward_frame_2 - 0.044 13.4 0.1 0.083 12.5 0.1 1.5 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW Fer4_10 PF13237.6 NODE_55310_length_312_cov_22.003610_g47375_i0reverse_frame_2 - 0.28 11.3 7.4 1 9.5 7.4 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain SH3BP5 PF05276.14 NODE_55309_length_312_cov_49.054152_g47374_i0forward_frame_2 - 0.017 15.0 3.0 0.021 14.7 3.0 1.1 1 0 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) tRNA-synt_1d PF00750.19 NODE_55309_length_312_cov_49.054152_g47374_i0forward_frame_2 - 0.048 12.6 0.3 0.056 12.4 0.3 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (R) CheR_N PF03705.15 NODE_55309_length_312_cov_49.054152_g47374_i0forward_frame_2 - 0.085 12.6 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 CheR methyltransferase, all-alpha domain LOH1CR12 PF10158.9 NODE_55308_length_312_cov_54.476534_g47373_i0reverse_frame_3 - 0.028 14.4 1.3 0.11 12.6 0.1 1.9 1 1 1 2 2 2 0 Tumour suppressor protein Mcm10 PF09332.11 NODE_55307_length_312_cov_55.974729_g47372_i0forward_frame_2 - 0.47 9.8 1.4 0.62 9.4 1.4 1.1 1 0 0 1 1 1 0 Mcm10 replication factor Ribosomal_L21p PF00829.21 NODE_55306_length_312_cov_57.718412_g47371_i0reverse_frame_3 - 0.025 14.8 0.1 0.037 14.3 0.1 1.3 1 0 0 1 1 1 0 Ribosomal prokaryotic L21 protein Rpr2 PF04032.16 NODE_55295_length_312_cov_82.826715_g47360_i0forward_frame_3 - 0.027 14.8 0.2 0.033 14.4 0.2 1.2 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF1719 PF08224.11 NODE_55295_length_312_cov_82.826715_g47360_i0forward_frame_2 - 0.3 10.2 1.2 0.3 10.2 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) DUF1381 PF07129.11 NODE_55294_length_312_cov_83.418773_g47359_i0reverse_frame_3 - 0.06 13.2 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1381) Phage_Orf51 PF06194.11 NODE_55294_length_312_cov_83.418773_g47359_i0forward_frame_3 - 0.08 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Phage Conserved Open Reading Frame 51 DDE_Tnp_1_3 PF13612.6 NODE_55293_length_312_cov_90.371841_g47358_i0forward_frame_2 - 0.06 13.3 0.1 0.084 12.9 0.1 1.1 1 0 0 1 1 1 0 Transposase DDE domain ISK_Channel PF02060.15 NODE_55293_length_312_cov_90.371841_g47358_i0forward_frame_2 - 0.087 12.5 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Slow voltage-gated potassium channel Ank_4 PF13637.6 NODE_55288_length_312_cov_104.140794_g47353_i0reverse_frame_3 - 1e-05 26.0 0.0 1.6e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_55288_length_312_cov_104.140794_g47353_i0reverse_frame_3 - 0.00032 21.2 0.0 0.00047 20.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_55288_length_312_cov_104.140794_g47353_i0reverse_frame_3 - 0.01 16.2 0.0 0.19 12.1 0.0 1.8 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Ank PF00023.30 NODE_55288_length_312_cov_104.140794_g47353_i0reverse_frame_3 - 0.011 16.2 0.0 4.8 7.8 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeat PH PF00169.29 NODE_55287_length_312_cov_107.101083_g47352_i0forward_frame_2 - 0.0046 17.4 0.2 0.0056 17.2 0.2 1.3 1 1 0 1 1 1 1 PH domain DUF4834 PF16118.5 NODE_55286_length_312_cov_110.151625_g47351_i0forward_frame_2 - 0.082 13.9 0.0 0.1 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Aminotran_MocR PF12897.7 NODE_55285_length_312_cov_115.187726_g47350_i0reverse_frame_2 - 0.045 12.5 0.1 0.046 12.5 0.1 1.0 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase DUF4590 PF15257.6 NODE_55284_length_312_cov_129.433213_g47349_i0forward_frame_3 - 0.26 11.2 9.4 0.33 10.9 9.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4590) Glyco_transf_90 PF05686.12 NODE_55281_length_312_cov_142.010830_g47346_i0reverse_frame_2 - 3.1e-09 36.2 0.1 3.7e-09 36.0 0.1 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 90 VSP PF03302.13 NODE_55278_length_312_cov_148.140794_g47343_i0forward_frame_3 - 0.00057 18.8 4.5 0.0007 18.6 4.5 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein SidE PF12252.8 NODE_55276_length_312_cov_226.162455_g47341_i0reverse_frame_2 - 0.12 9.9 0.6 0.13 9.8 0.6 1.0 1 0 0 1 1 1 0 Dot/Icm substrate protein MORN PF02493.20 NODE_55274_length_312_cov_267.169675_g47339_i0forward_frame_2 - 1.1e-11 43.9 20.3 1.4e-05 24.7 2.3 4.2 4 0 0 4 4 4 4 MORN repeat DUF5110 PF17137.4 NODE_55272_length_312_cov_339.566787_g47337_i0forward_frame_3 - 0.025 14.8 1.0 0.049 13.9 1.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5110) PHD_2 PF13831.6 NODE_55269_length_312_cov_720.277978_g47335_i0reverse_frame_3 - 0.02 14.4 0.7 0.029 13.9 0.7 1.3 1 0 0 1 1 1 0 PHD-finger PHD PF00628.29 NODE_55269_length_312_cov_720.277978_g47335_i0reverse_frame_3 - 0.026 14.4 0.4 0.042 13.7 0.4 1.3 1 0 0 1 1 1 0 PHD-finger DUF2618 PF10940.8 NODE_55269_length_312_cov_720.277978_g47335_i0forward_frame_3 - 0.12 12.2 0.9 0.21 11.4 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2618) Somatostatin PF03002.15 NODE_55269_length_312_cov_720.277978_g47335_i0forward_frame_3 - 0.38 10.7 3.1 0.83 9.6 3.1 1.6 1 0 0 1 1 1 0 Somatostatin/Cortistatin family PGC7_Stella PF15549.6 ORF99721 - 0.13 12.2 1.1 0.21 11.6 0.2 1.6 1 1 1 2 2 2 0 PGC7/Stella/Dppa3 domain PhoLip_ATPase_C PF16212.5 ORF99644 - 0.024 14.4 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF99644 - 0.061 13.2 0.0 0.1 12.5 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Adeno_E3B PF03376.14 ORF97213 - 0.11 12.8 0.4 0.11 12.8 0.4 1.6 2 0 0 2 2 2 0 Adenovirus E3B protein DUF5373 PF17343.2 ORF96425 - 0.011 15.6 0.5 0.013 15.3 0.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5373) Peptidase_U4 PF03419.13 ORF96425 - 0.025 13.9 0.4 0.029 13.7 0.4 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA PMP22_Claudin PF00822.20 ORF96425 - 0.027 14.4 0.8 0.032 14.1 0.8 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family DUF3810 PF12725.7 ORF96425 - 0.086 12.2 0.1 0.098 12.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) SIT PF15330.6 ORF96425 - 0.2 12.1 1.0 12 6.3 0.3 2.1 1 1 1 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT Saf_2TM PF18303.1 ORF96425 - 0.67 9.5 2.0 12 5.4 1.0 2.0 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain PhoLip_ATPase_C PF16212.5 ORF9611 - 0.02 14.7 0.1 0.021 14.6 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF9611 - 0.06 13.2 0.1 0.084 12.8 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain DUF5381 PF17353.2 ORF96052 - 0.33 10.7 9.0 0.12 12.2 4.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5381) PDR_CDR PF06422.12 ORF95500 - 0.037 13.9 1.4 0.037 13.9 1.4 1.9 2 1 0 2 2 2 0 CDR ABC transporter Corona_NS3b PF03053.14 ORF95500 - 1.4 8.6 11.4 1.7 8.4 11.4 1.1 1 0 0 1 1 1 0 ORF3b coronavirus protein EB_dh PF09459.10 ORF95439 - 0.13 12.2 0.3 0.16 11.9 0.3 1.1 1 0 0 1 1 1 0 Ethylbenzene dehydrogenase FGFR3_TM PF18123.1 ORF9526 - 5.1 6.7 9.1 10 5.8 1.1 2.6 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain PhoLip_ATPase_C PF16212.5 ORF93492 - 0.024 14.4 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF93492 - 0.061 13.2 0.0 0.1 12.5 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain DUF3576 PF12100.8 ORF93217 - 0.035 14.2 0.8 0.035 14.2 0.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3576) Beta-prism_lec PF16458.5 ORF93217 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 1 0 1 1 1 0 Beta-prism lectin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks258.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks258.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks258.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks258.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SAGA-Tad1 PF12767.7 ORF91051 - 0.15 11.8 0.1 0.16 11.7 0.1 1.1 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit DUF5381 PF17353.2 ORF90462 - 0.33 10.7 9.0 0.12 12.2 4.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5381) Copper-fist PF00649.18 ORF88753 - 0.0091 15.5 0.9 0.048 13.1 0.0 2.3 1 1 1 2 2 2 1 Copper fist DNA binding domain Pollen_allerg_1 PF01357.21 ORF87950 - 0.071 13.1 0.0 0.096 12.7 0.0 1.2 1 0 0 1 1 1 0 Pollen allergen Maf_N PF08383.11 ORF87928 - 0.0036 17.0 0.1 0.008 15.9 0.1 1.6 1 0 0 1 1 1 1 Maf N-terminal region Transformer PF06495.11 ORF86766 - 0.027 14.6 8.9 0.031 14.4 8.9 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein DUF3576 PF12100.8 ORF86500 - 0.035 14.2 0.8 0.035 14.2 0.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3576) Beta-prism_lec PF16458.5 ORF86500 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 1 0 1 1 1 0 Beta-prism lectin DUF4385 PF14328.6 ORF86397 - 0.073 13.1 2.5 0.13 12.4 2.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4385) DUF5381 PF17353.2 ORF84885 - 0.33 10.7 9.0 0.12 12.2 4.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5381) Ank_5 PF13857.6 ORF83882 - 0.037 14.4 0.0 0.065 13.6 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 ORF83882 - 0.1 13.1 0.0 0.23 12.0 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeat Ank_2 PF12796.7 ORF83882 - 0.13 12.9 0.0 0.21 12.2 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) L_biotic_typeA PF04604.13 ORF83635 - 0.11 12.4 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Type-A lantibiotic HTH_Tnp_1 PF01527.20 ORF83409 - 6.2e-10 39.3 0.9 8.1e-10 38.9 0.9 1.2 1 0 0 1 1 1 1 Transposase HTH_28 PF13518.6 ORF83409 - 2.2e-07 30.9 0.0 4.3e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF83409 - 2.6e-05 23.9 0.1 0.00013 21.6 0.2 2.0 2 0 0 2 2 2 1 Homeodomain-like domain TSC22 PF01166.18 ORF83409 - 0.00037 20.7 0.7 0.0013 19.0 0.9 1.8 2 0 0 2 2 2 1 TSC-22/dip/bun family Sigma70_r4_2 PF08281.12 ORF83409 - 0.027 14.1 1.4 0.028 14.1 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 Abhydrolase_9 PF10081.9 ORF83409 - 0.042 12.9 0.0 0.047 12.8 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta-hydrolase family HTH_29 PF13551.6 ORF83409 - 0.049 13.7 0.1 0.07 13.2 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HA PF03457.14 ORF83409 - 0.057 13.7 0.1 0.086 13.2 0.1 1.3 1 0 0 1 1 1 0 Helicase associated domain Chibby PF14645.6 ORF83409 - 0.087 13.2 0.4 0.13 12.7 0.4 1.4 1 1 0 1 1 1 0 Chibby family Exonuc_VII_S PF02609.16 ORF83409 - 0.087 12.9 0.8 0.3 11.2 0.5 1.9 2 0 0 2 2 2 0 Exonuclease VII small subunit DivIC PF04977.15 ORF83409 - 0.14 12.0 1.7 0.19 11.5 1.7 1.4 1 1 0 1 1 1 0 Septum formation initiator Surfac_D-trimer PF09006.11 ORF83409 - 0.18 11.7 0.4 0.37 10.7 0.4 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Cys_rich_KTR PF14205.6 ORF82334 - 0.047 13.5 0.6 0.066 13.0 0.6 1.2 1 0 0 1 1 1 0 Cysteine-rich KTR PhoLip_ATPase_C PF16212.5 ORF82021 - 0.021 14.6 0.1 0.023 14.4 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF82021 - 0.04 13.8 0.1 0.056 13.3 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain ABC_trans_CmpB PF06541.11 ORF81689 - 0.014 15.6 1.1 0.015 15.6 1.1 1.1 1 0 0 1 1 1 0 Putative ABC-transporter type IV DUF3488 PF11992.8 ORF81386 - 0.84 8.5 3.4 0.89 8.4 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) ASCH PF04266.14 ORF79494 - 9.5e-16 58.3 0.1 1.1e-15 58.2 0.1 1.0 1 0 0 1 1 1 1 ASCH domain DUF3850 PF12961.7 ORF79494 - 0.0003 20.8 0.3 0.0005 20.1 0.3 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF3850) IPT PF01745.16 ORF79494 - 0.092 12.1 0.0 0.097 12.0 0.0 1.1 1 0 0 1 1 1 0 Isopentenyl transferase UCH PF00443.29 ORF78493 - 1.4e-23 83.7 0.3 1.6e-23 83.5 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF78493 - 2.9e-05 23.8 0.0 3.4e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-LSD1 PF06943.12 ORF77027 - 4.3e-09 36.1 13.8 4.8e-06 26.3 0.6 2.2 2 0 0 2 2 2 2 LSD1 zinc finger zinc_ribbon_12 PF11331.8 ORF77027 - 0.015 15.1 15.5 0.77 9.6 0.0 3.9 2 1 1 3 3 3 0 Probable zinc-ribbon domain Elf1 PF05129.13 ORF77027 - 0.024 14.7 1.0 0.024 14.7 1.0 2.9 1 1 2 3 3 3 0 Transcription elongation factor Elf1 like FdhE PF04216.12 ORF77027 - 0.78 9.6 8.4 0.95 9.3 8.4 1.2 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zf-C3HC4_3 PF13920.6 ORF77027 - 0.91 9.4 11.3 0.45 10.4 7.2 2.2 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_6 PF14599.6 ORF77027 - 4.4 7.4 9.8 5.1 7.2 2.5 2.3 2 1 0 2 2 2 0 Zinc-ribbon IL5 PF02025.15 ORF76400 - 0.019 15.3 0.1 0.025 14.9 0.1 1.4 1 1 0 1 1 1 0 Interleukin 5 Peptidase_M56 PF05569.11 ORF7608 - 0.38 9.9 1.6 0.43 9.7 1.6 1.2 1 0 0 1 1 1 0 BlaR1 peptidase M56 Dynein_light PF01221.18 ORF75630 - 9.2e-21 74.0 0.0 1.1e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 Ferritin-like PF12902.7 ORF74265 - 0.1 12.4 1.2 0.11 12.4 1.2 1.1 1 0 0 1 1 1 0 Ferritin-like DUF1064 PF06356.11 ORF74010 - 0.037 14.4 3.5 0.046 14.1 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1064) X PF00739.19 ORF72716 - 0.12 12.5 3.1 0.14 12.3 3.1 1.1 1 0 0 1 1 1 0 Trans-activation protein X F_bP_aldolase PF01116.20 ORF72419 - 1.1e-26 93.9 0.0 1.2e-26 93.8 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II FMN_dh PF01070.18 ORF72419 - 0.047 12.7 0.0 0.071 12.1 0.0 1.3 1 0 0 1 1 1 0 FMN-dependent dehydrogenase CheR PF01739.18 ORF7203 - 0.1 12.1 0.1 0.12 11.8 0.1 1.1 1 0 0 1 1 1 0 CheR methyltransferase, SAM binding domain Cytomega_UL84 PF06284.11 ORF71494 - 0.54 8.7 1.3 0.65 8.4 1.3 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Herpes_LMP1 PF05297.11 ORF71494 - 3.8 6.6 4.4 4.6 6.3 4.4 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Mfa1 PF17445.2 ORF70610 - 0.22 11.6 0.9 0.22 11.6 0.9 2.0 2 0 0 2 2 2 0 Mating factor A1 Glycoprotein_G PF00802.19 ORF70377 - 0.061 12.7 3.9 0.067 12.5 3.9 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G MAT1-1-2 PF17043.5 ORF70340 - 0.053 13.4 0.2 0.072 13.0 0.1 1.3 1 1 0 1 1 1 0 Mating type protein 1-1-2 of unknown function Ribosomal_S14 PF00253.21 ORF70309 - 2e-07 30.7 0.0 2e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e X PF00739.19 ORF69389 - 0.12 12.5 3.1 0.14 12.3 3.1 1.1 1 0 0 1 1 1 0 Trans-activation protein X p450 PF00067.22 ORF6899 - 3.9e-18 65.5 0.2 4.1e-18 65.4 0.2 1.0 1 0 0 1 1 1 1 Cytochrome P450 SpoIIID PF12116.8 ORF68829 - 0.0026 17.8 0.2 0.011 15.8 0.0 1.9 1 1 1 2 2 2 1 Stage III sporulation protein D DUF917 PF06032.12 ORF68812 - 0.092 11.6 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF917) DUF333 PF03891.15 ORF68644 - 0.23 11.7 1.6 43 4.4 0.1 2.7 1 1 3 4 4 4 0 Domain of unknown function (DUF333) EF-hand_6 PF13405.6 ORF6798 - 0.00021 21.0 1.8 0.19 11.7 0.5 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF6798 - 0.014 15.9 3.0 0.043 14.3 2.2 2.1 1 1 1 2 2 2 0 EF-hand domain pair THP2 PF09432.10 ORF6798 - 0.026 14.6 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 Tho complex subunit THP2 EF-hand_5 PF13202.6 ORF6798 - 0.051 13.1 0.2 2.9 7.5 0.0 2.6 2 0 0 2 2 2 0 EF hand EF-hand_1 PF00036.32 ORF6798 - 0.12 11.9 2.4 5.3 6.8 0.0 2.9 2 1 0 2 2 2 0 EF hand DUF2177 PF09945.9 ORF6678 - 0.011 15.9 0.3 0.013 15.6 0.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2177) Caveolin PF01146.17 ORF6678 - 0.039 13.9 3.8 0.045 13.7 3.3 1.3 1 1 0 1 1 1 0 Caveolin CCAP PF11105.8 ORF65593 - 0.11 12.4 0.4 0.16 12.0 0.3 1.4 1 1 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a VWC PF00093.18 ORF6554 - 5.8 7.3 14.2 1.7 9.0 10.1 2.2 2 1 0 2 2 2 0 von Willebrand factor type C domain Esterase_phd PF10503.9 ORF6532 - 0.041 13.4 0.2 0.056 12.9 0.2 1.2 1 0 0 1 1 1 0 Esterase PHB depolymerase AtuA PF07287.11 ORF6462 - 0.007 15.1 0.1 0.0073 15.1 0.1 1.1 1 0 0 1 1 1 1 Acyclic terpene utilisation family protein AtuA Lactamase_B_3 PF13483.6 ORF6462 - 0.061 13.2 2.1 0.076 12.9 2.1 1.1 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF5641 PF18701.1 ORF64281 - 0.12 12.6 0.1 0.21 11.8 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5641) LMBR1 PF04791.16 ORF64087 - 0.0032 16.5 2.2 0.0038 16.2 2.2 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein Sel1 PF08238.12 ORF63570 - 8.1e-07 29.5 3.5 0.0066 17.1 0.1 2.7 3 0 0 3 3 3 2 Sel1 repeat PGC7_Stella PF15549.6 ORF62896 - 0.13 12.2 1.1 0.21 11.6 0.2 1.6 1 1 1 2 2 2 0 PGC7/Stella/Dppa3 domain PH_TFIIH PF08567.11 ORF62302 - 0.12 12.7 0.3 0.16 12.3 0.3 1.2 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain ERbeta_N PF12497.8 ORF62180 - 0.031 14.1 0.0 0.037 13.8 0.0 1.2 1 0 0 1 1 1 0 Estrogen receptor beta SHIPPO-rpt PF07004.12 ORF60832 - 0.0021 18.9 10.3 0.16 12.9 0.4 3.3 3 1 0 3 3 3 2 Sperm-tail PG-rich repeat PCMT PF01135.19 ORF60331 - 4.8e-26 91.8 0.0 5.3e-26 91.7 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF1618 PF07762.14 ORF60240 - 0.04 14.6 0.2 0.044 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1618) WHH PF14414.6 ORF60240 - 0.15 11.9 0.0 0.35 10.7 0.0 1.6 1 0 0 1 1 1 0 A nuclease of the HNH/ENDO VII superfamily with conserved WHH Mtf2_C PF14061.6 ORF58564 - 0.13 12.4 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 ZapD PF07072.11 ORF58262 - 0.026 14.3 0.1 0.03 14.1 0.1 1.1 1 0 0 1 1 1 0 Cell division protein CSN7a_helixI PF18392.1 ORF58262 - 0.14 12.0 0.5 0.2 11.6 0.5 1.2 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain DUF3576 PF12100.8 ORF5800 - 0.035 14.2 0.8 0.035 14.2 0.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3576) Beta-prism_lec PF16458.5 ORF5800 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 1 0 1 1 1 0 Beta-prism lectin DUF1533 PF07550.11 ORF57911 - 0.43 10.5 3.0 0.24 11.3 0.6 1.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1533) zf-LSD1 PF06943.12 ORF57625 - 4.3e-09 36.1 13.8 4.8e-06 26.3 0.6 2.2 2 0 0 2 2 2 2 LSD1 zinc finger zinc_ribbon_12 PF11331.8 ORF57625 - 0.015 15.1 15.5 0.77 9.6 0.0 3.9 2 1 1 3 3 3 0 Probable zinc-ribbon domain Elf1 PF05129.13 ORF57625 - 0.024 14.7 1.0 0.024 14.7 1.0 2.9 1 1 2 3 3 3 0 Transcription elongation factor Elf1 like FdhE PF04216.12 ORF57625 - 0.78 9.6 8.4 0.95 9.3 8.4 1.2 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zf-C3HC4_3 PF13920.6 ORF57625 - 0.91 9.4 11.3 0.45 10.4 7.2 2.2 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_6 PF14599.6 ORF57625 - 4.4 7.4 9.8 5.1 7.2 2.5 2.3 2 1 0 2 2 2 0 Zinc-ribbon CAF1A PF12253.8 ORF55079 - 0.00012 22.2 2.1 0.0002 21.4 2.1 1.5 1 0 0 1 1 1 1 Chromatin assembly factor 1 subunit A DUF1307 PF06998.11 ORF55079 - 0.017 15.1 0.5 0.049 13.7 0.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1307) V-set PF07686.17 ORF55079 - 0.14 12.3 0.1 0.18 12.0 0.1 1.2 1 0 0 1 1 1 0 Immunoglobulin V-set domain IncF PF17626.2 ORF54194 - 0.3 11.5 3.1 0.31 11.4 1.2 1.8 2 0 0 2 2 2 0 Inclusion membrane protein F DUF5488 PF17590.2 ORF53859 - 0.053 13.2 0.5 0.15 11.8 0.0 1.9 2 1 0 2 2 2 0 Family of unknown function (DUF5488) PhoLip_ATPase_C PF16212.5 ORF53338 - 0.022 14.5 0.1 0.023 14.5 0.1 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal PhoLip_ATPase_C PF16212.5 ORF52519 - 0.025 14.3 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF52519 - 0.035 14.0 0.0 0.049 13.5 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain CSD PF00313.22 ORF52101 - 0.15 12.0 0.0 0.51 10.2 0.0 1.8 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain ART PF01129.18 ORF51913 - 4.4e-05 22.9 0.0 4.6e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ADPrib_exo_Tox PF03496.14 ORF51913 - 0.0037 16.6 0.0 0.0043 16.4 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosyltransferase exoenzyme FAM199X PF15814.5 ORF5008 - 0.007 15.5 0.7 0.0078 15.3 0.7 1.1 1 0 0 1 1 1 1 Protein family FAM199X Phg_2220_C PF09524.10 ORF5008 - 0.012 15.7 0.3 0.018 15.1 0.3 1.3 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) DUF4606 PF15379.6 ORF5008 - 0.016 15.5 2.6 0.026 14.7 2.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4606) DUF3536 PF12055.8 ORF5008 - 0.019 14.3 0.1 0.021 14.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3536) PRP1_N PF06424.12 ORF5008 - 0.13 12.6 0.2 0.14 12.5 0.2 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal LRR_6 PF13516.6 ORF49175 - 6.9e-05 22.6 0.1 0.0065 16.4 0.1 3.0 3 0 0 3 3 3 1 Leucine Rich repeat LRR_4 PF12799.7 ORF49175 - 0.045 14.2 0.0 13 6.4 0.0 2.3 1 1 1 2 2 2 0 Leucine Rich repeats (2 copies) Sigma_reg_N PF13800.6 ORF48087 - 0.2 12.0 2.7 0.38 11.1 2.7 1.5 1 0 0 1 1 1 0 Sigma factor regulator N-terminal UCR_14kD PF02271.16 ORF47530 - 7.9e-25 86.7 1.2 8.6e-25 86.6 1.2 1.0 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit UIM PF02809.20 ORF47530 - 0.04 13.8 0.5 0.6 10.2 0.0 2.9 3 0 0 3 3 3 0 Ubiquitin interaction motif SF3a60_bindingd PF12108.8 ORF47006 - 0.079 12.9 0.7 0.079 12.9 0.7 2.6 3 0 0 3 3 3 0 Splicing factor SF3a60 binding domain DUF2756 PF10956.8 ORF46075 - 5.1e-42 142.6 15.7 5.3e-42 142.6 15.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2756) TFIIA PF03153.13 ORF46075 - 5.1 7.0 12.6 5.5 6.9 12.6 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Arf PF00025.21 ORF45741 - 3e-25 88.7 0.0 3e-25 88.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF45741 - 5.3e-10 39.6 0.0 7.3e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF45741 - 1.8e-08 34.5 0.0 2.4e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF45741 - 1e-06 28.3 0.0 1.2e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF45741 - 5e-06 26.2 0.0 6.4e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF45741 - 5e-06 25.9 0.0 0.00035 19.8 0.0 2.0 1 1 1 2 2 2 1 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF45741 - 2.1e-05 24.0 0.0 2.9e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF45741 - 7.2e-05 22.4 0.0 0.05 13.1 0.0 2.0 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF45741 - 0.0051 16.3 0.0 0.0057 16.2 0.0 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B DUF463 PF04317.12 ORF45741 - 0.035 13.1 0.0 0.039 12.9 0.0 1.1 1 0 0 1 1 1 0 YcjX-like family, DUF463 MobB PF03205.14 ORF45741 - 0.04 13.8 0.0 0.054 13.4 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 ORF45741 - 0.13 12.0 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain IIGP PF05049.13 ORF45741 - 0.13 11.3 0.0 0.15 11.1 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) ATPase PF06745.13 ORF45741 - 0.15 11.4 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 KaiC AAA_33 PF13671.6 ORF45741 - 0.19 11.9 0.1 0.24 11.6 0.1 1.3 1 1 0 1 1 1 0 AAA domain GNAT_C PF18164.1 ORF45243 - 0.042 13.5 0.2 0.049 13.3 0.2 1.2 1 0 0 1 1 1 0 GNAT-like C-terminal domain Glyco_transf_15 PF01793.16 ORF45243 - 0.19 10.9 2.6 0.21 10.8 2.6 1.0 1 0 0 1 1 1 0 Glycolipid 2-alpha-mannosyltransferase SmpA_OmlA PF04355.13 ORF44328 - 0.096 12.5 0.5 0.17 11.7 0.1 1.6 2 0 0 2 2 2 0 SmpA / OmlA family Cys_rich_KTR PF14205.6 ORF44035 - 0.047 13.5 0.6 0.066 13.0 0.6 1.2 1 0 0 1 1 1 0 Cysteine-rich KTR Cys_rich_KTR PF14205.6 ORF43868 - 0.047 13.5 0.6 0.066 13.0 0.6 1.2 1 0 0 1 1 1 0 Cysteine-rich KTR Ribosomal_S10 PF00338.22 ORF43203 - 1.5e-34 118.2 0.1 1.6e-34 118.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e DUF3576 PF12100.8 ORF42812 - 0.035 14.2 0.8 0.035 14.2 0.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3576) Beta-prism_lec PF16458.5 ORF42812 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 1 0 1 1 1 0 Beta-prism lectin TPR_MalT PF17874.1 ORF41996 - 0.02 14.3 0.1 0.021 14.2 0.1 1.0 1 0 0 1 1 1 0 MalT-like TPR region Synaptobrevin PF00957.21 ORF41635 - 1.2e-17 63.4 0.2 1.6e-17 63.1 0.2 1.2 1 0 0 1 1 1 1 Synaptobrevin Sec20 PF03908.13 ORF41635 - 0.073 13.0 0.2 0.17 11.8 0.1 1.6 1 1 0 1 1 1 0 Sec20 DUF2207 PF09972.9 ORF41635 - 0.092 11.5 1.5 0.1 11.4 1.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) JAB PF01398.21 ORF41095 - 1.6e-10 41.0 0.5 2.4e-10 40.4 0.5 1.3 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 ORF41095 - 0.11 13.0 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Maintenance of mitochondrial structure and function MttA_Hcf106 PF02416.16 ORF39616 - 4e-12 45.3 0.1 5.8e-12 44.7 0.1 1.4 1 0 0 1 1 1 1 mttA/Hcf106 family Pilin_PilX PF11530.8 ORF39531 - 0.016 15.1 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Minor type IV pilin, PilX zf-RING_UBOX PF13445.6 ORF39047 - 0.42 10.7 0.1 0.42 10.7 0.1 2.1 2 0 0 2 2 2 0 RING-type zinc-finger cNMP_binding PF00027.29 ORF38503 - 6.7e-06 26.1 0.0 0.00012 22.1 0.0 2.0 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain 3H PF02829.14 ORF37043 - 0.083 13.2 0.0 16 5.9 0.0 2.1 1 1 1 2 2 2 0 3H domain DUF2890 PF11081.8 ORF36848 - 0.44 10.6 3.0 0.57 10.3 3.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) TPH PF13868.6 ORF35598 - 0.0055 15.3 38.3 0.0059 15.2 38.3 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain UvrD-helicase PF00580.21 ORF35598 - 3.1 7.2 12.9 3.6 7.0 12.9 1.0 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain UPF0051 PF01458.17 ORF320 - 8.9e-24 84.4 0.0 1e-23 84.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) DUF2148 PF09918.9 ORF31275 - 0.066 13.3 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein containing a ferredoxin domain (DUF2148) SLT_beta PF02258.16 ORF30921 - 0.12 12.4 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Shiga-like toxin beta subunit DUF1974 PF09317.11 ORF30791 - 0.0048 16.5 3.1 0.0055 16.3 3.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1974) TMEM191C PF15194.6 ORF30791 - 0.15 12.2 4.7 2.4 8.4 0.4 2.1 1 1 1 2 2 2 0 TMEM191C family THOC7 PF05615.13 ORF30791 - 0.16 12.3 11.1 0.22 11.8 11.1 1.2 1 0 0 1 1 1 0 Tho complex subunit 7 DUF501 PF04417.12 ORF30791 - 0.39 10.5 5.8 0.47 10.3 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF501) TMPIT PF07851.13 ORF30791 - 2.5 7.3 4.2 2.7 7.1 4.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4407 PF14362.6 ORF30791 - 7.1 5.9 11.7 7.6 5.8 11.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PhoLip_ATPase_C PF16212.5 ORF30192 - 0.021 14.6 0.1 0.023 14.4 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF30192 - 0.04 13.8 0.1 0.056 13.3 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain DUF1819 PF08849.11 ORF29930 - 0.25 11.1 2.1 0.69 9.7 0.6 1.9 1 1 1 2 2 2 0 Putative inner membrane protein (DUF1819) ALMT PF11744.8 ORF29537 - 2.4 6.9 6.9 2.7 6.7 6.9 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Sec62 PF03839.16 ORF29537 - 4.2 6.8 12.0 5 6.6 12.0 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 MDFI PF15316.6 ORF29537 - 6 6.9 8.9 6.9 6.7 8.9 1.0 1 0 0 1 1 1 0 MyoD family inhibitor Cation_ATPase_C PF00689.21 ORF29455 - 3.8 7.2 16.8 4.4 7.0 16.8 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF1075 PF06388.11 ORF29163 - 1.1 9.4 5.3 1.3 9.0 1.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1075) PPI_Ypi1 PF07491.11 ORF28714 - 1.9 8.4 7.9 0.39 10.6 3.3 1.9 2 0 0 2 2 2 0 Protein phosphatase inhibitor LapA_dom PF06305.11 ORF2854 - 0.076 12.8 0.1 0.17 11.7 0.1 1.6 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain MTHFR_C PF12225.8 ORF28181 - 0.031 13.9 0.7 0.048 13.3 0.7 1.3 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal Ribosomal_L21p PF00829.21 ORF28143 - 2.6e-37 127.1 3.1 2.8e-37 127.0 3.1 1.0 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein CSD PF00313.22 ORF27892 - 0.15 12.0 0.0 0.51 10.2 0.0 1.8 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain DUF411 PF04214.13 ORF26670 - 0.15 12.0 0.3 0.25 11.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF HD_3 PF13023.6 ORF25228 - 0.013 15.4 0.5 0.018 15.0 0.4 1.4 1 1 0 1 1 1 0 HD domain cwf21 PF08312.12 ORF25228 - 0.91 9.7 10.1 0.13 12.4 4.6 2.4 2 1 0 2 2 2 0 cwf21 domain Ribosomal_S13 PF00416.22 ORF2462 - 2.6e-34 118.4 0.1 2.8e-34 118.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 Sdh5 PF03937.16 ORF2462 - 0.13 12.2 0.2 0.27 11.2 0.0 1.6 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase MTD PF01993.18 ORF24140 - 0.01 15.2 0.1 0.011 15.1 0.1 1.0 1 0 0 1 1 1 0 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase Bro-N PF02498.17 ORF23612 - 0.049 14.3 1.4 0.07 13.8 1.4 1.2 1 0 0 1 1 1 0 BRO family, N-terminal domain MDFI PF15316.6 ORF23612 - 1.3 9.1 4.2 1.4 9.0 4.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor zf-ribbon_3 PF13248.6 ORF23374 - 1.6 8.2 5.7 4.9 6.7 0.9 3.1 2 1 1 3 3 3 0 zinc-ribbon domain DUF2207 PF09972.9 ORF22988 - 3.5 6.3 9.9 3.8 6.1 9.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) AIPR PF10592.9 ORF22791 - 0.41 10.2 5.7 0.44 10.1 5.7 1.0 1 0 0 1 1 1 0 AIPR protein MscS_TM PF12794.7 ORF22545 - 0.039 12.8 0.0 0.041 12.7 0.0 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 LPD5 PF18799.1 ORF21818 - 0.014 15.8 0.5 0.016 15.6 0.5 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 5 Arc PF03869.14 ORF21818 - 0.064 13.1 0.1 1.7 8.5 0.0 2.2 2 0 0 2 2 2 0 Arc-like DNA binding domain CopD PF05425.13 ORF19521 - 0.085 13.3 0.0 0.09 13.2 0.0 1.1 1 0 0 1 1 1 0 Copper resistance protein D MttA_Hcf106 PF02416.16 ORF18998 - 2.2e-15 55.7 0.6 3.6e-15 55.0 0.6 1.5 1 1 0 1 1 1 1 mttA/Hcf106 family DUF1980 PF09323.10 ORF18998 - 0.0013 18.7 0.0 0.0015 18.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1980) DUF4834 PF16118.5 ORF18998 - 0.008 17.1 0.1 0.011 16.7 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) DUF5329 PF17263.2 ORF17915 - 0.013 15.7 0.3 0.016 15.4 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5329) EMC3_TMCO1 PF01956.16 ORF17915 - 0.14 11.9 1.2 0.16 11.7 1.2 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF1075 PF06388.11 ORF17611 - 1.1 9.4 5.3 1.3 9.0 1.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1075) UCR_hinge PF02320.16 ORF1651 - 0.19 12.0 0.0 0.25 11.6 0.0 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein DUF5488 PF17590.2 ORF15940 - 0.053 13.2 0.5 0.15 11.8 0.0 1.9 2 1 0 2 2 2 0 Family of unknown function (DUF5488) Form-deh_trans PF09163.11 ORF15568 - 3.9e-21 74.5 0.1 7.1e-21 73.7 0.1 1.4 1 0 0 1 1 1 1 Formate dehydrogenase N, transmembrane PHM7_cyt PF14703.6 ORF152900 - 0.36 11.0 4.9 0.4 10.9 4.9 1.2 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter PfkB PF00294.24 ORF152744 - 0.052 12.9 0.4 0.058 12.7 0.4 1.0 1 0 0 1 1 1 0 pfkB family carbohydrate kinase DUF5422 PF17459.2 ORF152268 - 0.16 12.2 3.7 0.19 11.9 3.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5422) DUF1679 PF07914.11 ORF151488 - 0.0011 17.9 0.3 0.0012 17.8 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) DUF771 PF05595.11 ORF151488 - 0.013 15.5 0.7 2.7 8.0 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF771) Guanylate_cyc PF00211.20 ORF151344 - 0.13 11.9 0.4 0.17 11.5 0.4 1.1 1 0 0 1 1 1 0 Adenylate and Guanylate cyclase catalytic domain ABA_GPCR PF12430.8 ORF150956 - 0.097 12.4 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Abscisic acid G-protein coupled receptor DHHC PF01529.20 ORF15088 - 6.1e-21 74.9 6.4 6.6e-21 74.8 6.4 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase DUF1272 PF06906.11 ORF15088 - 0.39 10.9 7.6 5.4 7.2 7.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) zinc-ribbons_6 PF07191.12 ORF15088 - 0.58 10.2 8.7 0.8 9.7 8.7 1.2 1 0 0 1 1 1 0 zinc-ribbons Corona_NSP4_C PF16348.5 ORF150081 - 0.18 12.6 0.0 0.25 12.2 0.0 1.1 1 0 0 1 1 1 0 Coronavirus nonstructural protein 4 C-terminus zf-LITAF-like PF10601.9 ORF148637 - 7 7.0 7.7 2.4e+02 2.1 7.7 2.2 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain Glyco_hydro_20 PF00728.22 ORF14834 - 0.00074 19.0 0.0 0.00087 18.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain DUF4212 PF13937.6 ORF148104 - 0.13 12.7 3.9 0.078 13.4 2.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) Ribosomal_S14 PF00253.21 ORF147881 - 2e-07 30.7 0.0 2e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e DUF3742 PF12553.8 ORF147541 - 1.5 8.9 4.2 2 8.5 4.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) FGFR3_TM PF18123.1 ORF147463 - 0.14 11.7 5.5 0.29 10.7 5.5 1.6 1 0 0 1 1 1 0 Fibroblast growth factor receptor 3 transmembrane domain DUF4212 PF13937.6 ORF147447 - 0.13 12.7 3.9 0.078 13.4 2.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) GWT1 PF06423.12 ORF14729 - 0.75 9.9 5.1 1.1 9.3 5.1 1.4 1 1 0 1 1 1 0 GWT1 DUF1360 PF07098.11 ORF14729 - 1.4 8.9 4.6 9.1 6.3 1.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1360) p450 PF00067.22 ORF146588 - 3.3e-18 65.7 0.3 3.5e-18 65.6 0.3 1.0 1 0 0 1 1 1 1 Cytochrome P450 Pou PF00157.17 ORF146403 - 0.072 13.1 0.3 0.14 12.1 0.3 1.6 1 1 0 1 1 1 0 Pou domain - N-terminal to homeobox domain DUF3027 PF11228.8 ORF1464 - 0.038 14.0 3.5 0.04 13.9 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3027) Corona_NSP4_C PF16348.5 ORF14605 - 0.18 12.6 0.0 0.25 12.2 0.0 1.1 1 0 0 1 1 1 0 Coronavirus nonstructural protein 4 C-terminus DHHC PF01529.20 ORF145811 - 6.1e-21 74.9 6.4 6.6e-21 74.8 6.4 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase DUF1272 PF06906.11 ORF145811 - 0.39 10.9 7.6 5.4 7.2 7.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) zinc-ribbons_6 PF07191.12 ORF145811 - 0.58 10.2 8.7 0.8 9.7 8.7 1.2 1 0 0 1 1 1 0 zinc-ribbons CAML PF14963.6 ORF143629 - 0.17 12.0 0.3 0.18 11.9 0.3 1.1 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand Arf PF00025.21 ORF143377 - 1.3e-43 148.5 0.4 1.4e-43 148.4 0.4 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF143377 - 1e-12 48.4 0.0 1.3e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 ORF143377 - 1.2e-10 41.2 1.5 6e-05 22.4 0.1 2.0 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 ORF143377 - 7.9e-09 35.3 0.0 9.8e-09 35.0 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 ORF143377 - 6.9e-07 28.9 0.0 8.5e-07 28.6 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF143377 - 7.2e-07 28.8 0.0 9.1e-07 28.5 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 ORF143377 - 1.4e-06 28.4 0.0 1.8e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase TniB PF05621.11 ORF143377 - 0.0044 16.5 0.0 0.0055 16.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein ATPase_2 PF01637.18 ORF143377 - 0.0044 17.0 0.1 0.0047 16.9 0.1 1.1 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 ORF143377 - 0.016 15.2 0.0 0.018 15.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain KH_2 PF07650.17 ORF143377 - 0.07 13.0 0.3 0.22 11.4 0.0 1.9 2 0 0 2 2 2 0 KH domain MobB PF03205.14 ORF143377 - 0.075 12.9 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B DUF5373 PF17343.2 ORF141716 - 0.011 15.6 0.5 0.013 15.3 0.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5373) Peptidase_U4 PF03419.13 ORF141716 - 0.025 13.9 0.4 0.029 13.7 0.4 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA PMP22_Claudin PF00822.20 ORF141716 - 0.027 14.4 0.8 0.032 14.1 0.8 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family DUF3810 PF12725.7 ORF141716 - 0.086 12.2 0.1 0.098 12.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) SIT PF15330.6 ORF141716 - 0.2 12.1 1.0 12 6.3 0.3 2.1 1 1 1 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT Saf_2TM PF18303.1 ORF141716 - 0.67 9.5 2.0 12 5.4 1.0 2.0 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain PAP_fibrillin PF04755.12 ORF141679 - 1.7e-09 37.9 0.0 1.9e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 PAP_fibrillin DUF5506 PF17611.2 ORF141376 - 0.064 13.2 0.7 0.088 12.7 0.5 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5506) UPF0126 PF03458.13 ORF139399 - 0.097 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 UPF0126 domain Flu_PA PF00603.17 ORF139399 - 0.25 9.4 0.0 0.28 9.3 0.0 1.0 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PA Methuselah_N PF06652.12 ORF139159 - 0.26 11.2 2.2 0.31 10.9 2.2 1.1 1 0 0 1 1 1 0 Methuselah N-terminus DUF2085 PF09858.9 ORF13901 - 0.01 16.3 0.2 0.02 15.4 0.1 1.5 2 0 0 2 2 2 0 Predicted membrane protein (DUF2085) DUF3039 PF11238.8 ORF13901 - 0.03 14.1 1.5 0.031 14.0 0.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) DUF4212 PF13937.6 ORF138956 - 0.13 12.7 3.9 0.078 13.4 2.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4212) DUF4533 PF15047.6 ORF138795 - 0.041 13.4 0.1 0.051 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4533) DUF3440 PF11922.8 ORF138795 - 0.082 12.6 0.1 0.085 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) RRM_7 PF16367.5 ORF13841 - 0.018 15.1 0.1 0.12 12.5 0.0 2.0 1 1 1 2 2 2 0 RNA recognition motif Deltameth_res PF16020.5 ORF13841 - 0.078 12.9 0.4 0.078 12.9 0.4 1.6 2 0 0 2 2 2 0 Deltamethrin resistance Pox_polyA_pol PF03296.13 ORF138065 - 0.095 12.6 0.0 0.14 12.1 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain PsbL PF02419.17 ORF137877 - 1.3e-18 66.6 0.9 2.1e-18 66.0 0.9 1.3 1 0 0 1 1 1 1 PsbL protein PGC7_Stella PF15549.6 ORF137723 - 0.13 12.2 1.1 0.21 11.6 0.2 1.6 1 1 1 2 2 2 0 PGC7/Stella/Dppa3 domain STAG PF08514.11 ORF1368 - 0.081 12.8 0.3 0.095 12.6 0.3 1.2 1 0 0 1 1 1 0 STAG domain DUF1465 PF07323.12 ORF134897 - 0.0056 16.5 0.1 0.0071 16.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1465) Arm_vescicular PF18770.1 ORF133799 - 0.038 13.9 0.1 0.071 13.1 0.1 1.5 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor GST_N_3 PF13417.6 ORF133799 - 0.14 12.6 0.1 0.26 11.7 0.1 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain LSM PF01423.22 ORF133585 - 1.2e-17 63.4 0.2 1.5e-17 63.0 0.2 1.2 1 0 0 1 1 1 1 LSM domain DUF411 PF04214.13 ORF133032 - 0.15 12.0 0.3 0.25 11.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF Acetyltransf_16 PF05301.11 ORF132781 - 3.9e-09 36.5 0.0 4.5e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 CBM_6 PF03422.15 ORF132663 - 0.073 13.4 0.0 0.093 13.0 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate binding module (family 6) KxDL PF10241.9 ORF132442 - 0.0064 16.7 2.8 0.0076 16.5 2.8 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein CSF-1 PF05337.11 ORF132442 - 0.0079 16.3 6.0 0.009 16.1 6.0 1.1 1 0 0 1 1 1 1 Macrophage colony stimulating factor-1 (CSF-1) DUF5344 PF17279.2 ORF132442 - 0.0085 16.6 1.0 0.03 14.9 1.0 1.9 1 1 0 1 1 1 1 Family of unknown function (DUF5344) TelA PF05816.11 ORF132442 - 0.016 14.3 3.0 0.065 12.3 2.4 1.8 1 1 1 2 2 2 0 Toxic anion resistance protein (TelA) YqzH PF14164.6 ORF132442 - 0.046 13.8 2.0 0.23 11.6 1.0 2.2 1 1 1 2 2 2 0 YqzH-like protein FapA PF03961.13 ORF132442 - 0.086 11.4 4.3 0.1 11.2 4.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4710 PF15828.5 ORF132442 - 0.14 12.3 3.0 0.22 11.6 3.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) TMPIT PF07851.13 ORF132442 - 0.18 11.0 2.0 0.22 10.7 2.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein bZIP_1 PF00170.21 ORF132442 - 0.21 11.7 8.0 0.13 12.3 2.1 2.2 1 1 1 2 2 2 0 bZIP transcription factor DASH_Dad3 PF08656.10 ORF132442 - 0.45 10.6 2.6 1.1 9.4 2.6 1.7 1 1 0 1 1 1 0 DASH complex subunit Dad3 Transposase_31 PF04754.12 ORF132159 - 1.2e-44 152.4 0.5 1.3e-44 152.2 0.5 1.0 1 0 0 1 1 1 1 Putative transposase, YhgA-like AC_N PF16214.5 ORF132106 - 0.042 13.0 0.8 0.044 12.9 0.8 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF5488 PF17590.2 ORF131467 - 0.053 13.2 0.5 0.15 11.8 0.0 1.9 2 1 0 2 2 2 0 Family of unknown function (DUF5488) Ribosomal_S14 PF00253.21 ORF131142 - 2e-07 30.7 0.0 2e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e AsmA_2 PF13502.6 ORF130886 - 0.13 11.8 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 AsmA-like C-terminal region FXMRP1_C_core PF12235.8 ORF130718 - 6 7.5 14.1 21 5.7 14.2 1.7 1 1 0 1 1 1 0 Fragile X-related 1 protein core C terminal RGS PF00615.19 ORF126731 - 0.062 13.6 0.1 0.084 13.1 0.1 1.2 1 0 0 1 1 1 0 Regulator of G protein signaling domain LRR_11 PF18831.1 ORF126569 - 0.065 12.8 3.9 20 4.8 0.1 3.7 2 1 2 4 4 4 0 Leucine-rich repeat NADHdh-2_N PF12155.8 ORF126569 - 0.14 12.5 5.6 0.41 11.1 1.2 2.2 1 1 1 2 2 2 0 NADH dehydrogenase subunit 2 N-terminal Pentapeptide_3 PF13576.6 ORF126569 - 0.33 11.2 10.2 1.8e+02 2.4 10.2 3.9 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) LRR_11 PF18831.1 ORF126529 - 0.065 12.8 3.9 20 4.8 0.1 3.7 2 1 2 4 4 4 0 Leucine-rich repeat NADHdh-2_N PF12155.8 ORF126529 - 0.14 12.5 5.6 0.41 11.1 1.2 2.2 1 1 1 2 2 2 0 NADH dehydrogenase subunit 2 N-terminal Pentapeptide_3 PF13576.6 ORF126529 - 0.33 11.2 10.2 1.8e+02 2.4 10.2 3.9 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) DNA_pol3_tau_5 PF12170.8 ORF124975 - 0.11 12.6 1.5 0.12 12.4 1.5 1.1 1 0 0 1 1 1 0 DNA polymerase III tau subunit V interacting with alpha DUF4455 PF14643.6 ORF124933 - 0.12 11.1 0.0 0.13 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4455) zf-LITAF-like PF10601.9 ORF121721 - 2.5e-13 50.1 19.7 3.3e-13 49.7 19.7 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF866 PF05907.13 ORF121240 - 3.2e-28 98.6 1.2 3.4e-28 98.5 1.2 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF866) Myc_target_1 PF15179.6 ORF121064 - 0.051 13.5 0.3 0.054 13.4 0.3 1.1 1 0 0 1 1 1 0 Myc target protein 1 K_channel_TID PF07941.11 ORF121064 - 0.17 12.3 3.8 0.38 11.2 1.1 2.0 1 1 1 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain Glycoprotein_G PF00802.19 ORF120383 - 0.061 12.7 3.9 0.067 12.5 3.9 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Lac_bphage_repr PF06543.12 ORF118730 - 0.013 15.4 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor 2OG-FeII_Oxy_3 PF13640.6 ORF118569 - 4.6e-12 46.7 0.0 5.5e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF118569 - 0.00017 22.0 0.0 0.00021 21.7 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF4675 PF15720.5 ORF11721 - 0.04 13.7 0.5 0.045 13.5 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4675) SdpA PF17418.2 ORF116559 - 0.095 12.6 0.3 0.13 12.2 0.3 1.2 1 0 0 1 1 1 0 Sporulation delaying protein SdpA DUF1548 PF07579.11 ORF116158 - 0.048 14.0 1.9 0.056 13.8 1.9 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) DUF917 PF06032.12 ORF115348 - 0.092 11.6 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF917) Methyltransf_4 PF02390.17 ORF115002 - 8.1e-32 110.1 0.0 8.9e-32 109.9 0.0 1.0 1 0 0 1 1 1 1 Putative methyltransferase DoxX PF07681.12 ORF114282 - 0.00081 19.9 0.3 0.0015 19.1 0.3 1.5 1 1 0 1 1 1 1 DoxX DoxX_2 PF13564.6 ORF114282 - 0.00088 19.3 0.2 0.0021 18.1 0.2 1.6 1 1 0 1 1 1 1 DoxX-like family HR_lesion PF05514.11 ORF114282 - 0.063 13.5 0.1 0.076 13.2 0.1 1.1 1 0 0 1 1 1 0 HR-like lesion-inducing Corona_NSP4_C PF16348.5 ORF113852 - 0.18 12.6 0.0 0.25 12.2 0.0 1.1 1 0 0 1 1 1 0 Coronavirus nonstructural protein 4 C-terminus DUF5516 PF17637.2 ORF112846 - 1.2 9.0 6.7 0.16 11.8 1.9 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5516) DEFB136 PF17333.2 ORF112811 - 0.15 12.1 3.8 5.7 7.0 0.6 2.5 2 1 0 2 2 2 0 Beta defensin 136 DUF5362 PF17319.2 ORF112453 - 0.092 12.6 0.5 0.18 11.7 0.5 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5362) DUF4675 PF15720.5 ORF112373 - 0.04 13.7 0.5 0.045 13.5 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4675) PhoLip_ATPase_C PF16212.5 ORF111898 - 0.02 14.7 0.1 0.021 14.6 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Pox_polyA_pol PF03296.13 ORF111898 - 0.066 13.1 0.1 0.091 12.6 0.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain DUF4685 PF15737.5 ORF11041 - 0.017 15.6 0.1 0.02 15.3 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4685) DUF4446 PF14584.6 ORF11041 - 0.14 12.1 0.9 0.18 11.8 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) VHS PF00790.19 ORF110270 - 0.056 13.3 0.1 0.092 12.6 0.1 1.3 1 0 0 1 1 1 0 VHS domain PDEase_I_N PF08499.12 ORF110270 - 0.071 13.0 0.6 0.11 12.3 0.2 1.5 2 0 0 2 2 2 0 3'5'-cyclic nucleotide phosphodiesterase N-terminal PROCN PF08083.11 ORF10981 - 0.14 10.9 0.0 0.14 10.8 0.0 1.0 1 0 0 1 1 1 0 PROCN (NUC071) domain DUF4408 PF14364.6 ORF10969 - 0.75 9.6 2.5 1.6 8.5 2.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4408) NgoMIV_restric PF09015.10 ORF109388 - 0.44 9.6 0.9 0.73 8.9 0.2 1.6 1 1 1 2 2 2 0 NgoMIV restriction enzyme zf-CDGSH PF09360.10 ORF109123 - 2.7e-12 46.7 0.8 4.4e-12 46.0 0.2 1.7 2 0 0 2 2 2 1 Iron-binding zinc finger CDGSH type Ribosomal_S14 PF00253.21 ORF108899 - 2e-07 30.7 0.0 2e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e Exonuc_X-T_C PF08411.10 ORF108786 - 3.6e-31 108.3 0.0 4.2e-31 108.1 0.0 1.1 1 0 0 1 1 1 1 Exonuclease C-terminal Peripla_BP_4 PF13407.6 ORF108235 - 0.00028 20.5 2.0 0.00031 20.4 2.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Glyco_hydro_59 PF02057.15 ORF108235 - 0.048 12.9 0.1 0.048 12.9 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 FlgT_M PF16539.5 ORF108235 - 0.073 13.2 0.1 0.081 13.1 0.1 1.1 1 0 0 1 1 1 0 Flagellar assembly protein T, middle domain RE_TdeIII PF09520.10 ORF108235 - 0.084 12.5 0.2 0.091 12.4 0.2 1.1 1 0 0 1 1 1 0 Type II restriction endonuclease, TdeIII UPF0122 PF04297.14 ORF107864 - 0.032 14.4 1.3 0.043 14.0 1.3 1.1 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like AMP-binding_C_2 PF14535.6 ORF107864 - 0.034 14.4 0.1 0.054 13.8 0.1 1.4 1 1 0 1 1 1 0 AMP-binding enzyme C-terminal domain PAP2 PF01569.21 ORF107713 - 1.6 8.5 12.0 1.3 8.8 11.2 1.3 1 1 0 1 1 1 0 PAP2 superfamily DUF2605 PF10792.9 ORF107181 - 0.051 13.5 0.0 0.066 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2605) Croc_4 PF17691.1 ORF107181 - 0.057 13.5 0.1 0.11 12.5 0.1 1.5 1 1 0 1 1 1 0 Contingent replication of cDNA 4 Ribosomal_S14 PF00253.21 ORF107081 - 2e-07 30.7 0.0 2e-07 30.7 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e DUF5373 PF17343.2 ORF105394 - 0.011 15.6 0.5 0.013 15.3 0.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5373) Peptidase_U4 PF03419.13 ORF105394 - 0.025 13.9 0.4 0.029 13.7 0.4 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA PMP22_Claudin PF00822.20 ORF105394 - 0.027 14.4 0.8 0.032 14.1 0.8 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family DUF3810 PF12725.7 ORF105394 - 0.086 12.2 0.1 0.098 12.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) SIT PF15330.6 ORF105394 - 0.2 12.1 1.0 12 6.3 0.3 2.1 1 1 1 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT Saf_2TM PF18303.1 ORF105394 - 0.67 9.5 2.0 12 5.4 1.0 2.0 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain N_BRCA1_IG PF16158.5 ORF104456 - 0.00027 21.6 0.0 0.0003 21.5 0.0 1.1 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene RuvC PF02075.17 ORF103799 - 5.4e-35 120.5 3.6 6.5e-35 120.2 3.6 1.1 1 0 0 1 1 1 1 Crossover junction endodeoxyribonuclease RuvC NeuB PF03102.14 ORF103799 - 0.014 14.9 0.1 0.015 14.8 0.1 1.0 1 0 0 1 1 1 0 NeuB family DUF4974 PF16344.5 ORF10284 - 0.02 14.9 2.3 0.18 11.8 0.2 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4974) Dynein_light PF01221.18 ORF102128 - 9.2e-21 74.0 0.0 1.1e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Dynein light chain type 1 MLANA PF14991.6 ORF100418 - 0.17 12.2 0.0 0.22 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein melan-A VirB3 PF05101.13 ORF100344 - 0.15 12.4 0.2 0.15 12.4 0.2 1.6 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein ThiF PF00899.21 NODE_56260_length_304_cov_1.148699_g48323_i0reverse_frame_1 - 0.0091 15.4 0.0 0.01 15.2 0.0 1.2 1 0 0 1 1 1 1 ThiF family PqqD PF05402.12 NODE_56260_length_304_cov_1.148699_g48323_i0reverse_frame_1 - 0.14 12.5 0.0 18 5.7 0.0 2.3 2 0 0 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks259.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks259.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks259.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks259.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Sugar_tr PF00083.24 ORF51752 - 3.3e-53 181.1 17.4 4.1e-53 180.9 17.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF51752 - 1.4e-20 73.6 15.3 1.4e-20 73.6 15.3 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily Phage_holin_3_2 PF04550.12 ORF51752 - 0.19 12.3 1.9 0.31 11.6 0.6 2.1 2 0 0 2 2 2 0 Phage holin family 2 Rep-A_N PF04057.12 ORF51626 - 0.11 12.6 2.3 0.41 10.7 0.3 2.5 2 0 0 2 2 2 0 Replication factor-A protein 1, N-terminal domain WES_acyltransf PF03007.16 ORF3719 - 1e-13 51.7 0.0 1.6e-13 51.0 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF3719 - 2.6e-09 37.2 0.0 4.8e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Condensation PF00668.20 ORF3719 - 0.051 12.2 0.1 0.085 11.5 0.1 1.3 1 0 0 1 1 1 0 Condensation domain DUF2203 PF09969.9 ORF31700 - 0.016 15.9 1.5 0.08 13.7 0.0 2.6 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) ANAPC4 PF12896.7 ORF31700 - 0.052 13.0 0.0 0.26 10.7 0.0 2.0 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 4 Integrase_Zn PF02022.19 ORF31700 - 0.055 13.4 0.3 0.13 12.2 0.1 1.8 2 0 0 2 2 2 0 Integrase Zinc binding domain DUF948 PF06103.11 ORF31700 - 0.16 12.3 0.4 1.2 9.4 0.1 2.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Ca_chan_IQ PF08763.11 ORF31700 - 0.17 12.1 0.2 0.52 10.6 0.2 1.9 1 1 0 1 1 1 0 Voltage gated calcium channel IQ domain PX PF00787.24 ORF21293 - 1.3e-15 57.3 0.1 5.2e-15 55.4 0.0 2.0 2 0 0 2 2 2 1 PX domain SPICE PF15678.5 ORF21293 - 0.0058 16.0 1.4 0.0077 15.6 0.5 1.5 2 0 0 2 2 2 1 Centriole duplication and mitotic chromosome congression Transferrin PF00405.17 ORF21293 - 0.03 13.5 0.1 0.057 12.6 0.1 1.4 1 0 0 1 1 1 0 Transferrin Ima1_N PF09779.9 ORF21293 - 0.059 14.2 0.3 1.6 9.6 0.0 2.5 2 0 0 2 2 2 0 Ima1 N-terminal domain Fib_alpha PF08702.10 ORF21293 - 0.075 13.2 2.3 0.43 10.7 0.0 2.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family FAM76 PF16046.5 ORF21293 - 0.25 10.7 4.2 0.34 10.2 4.2 1.2 1 0 0 1 1 1 0 FAM76 protein Tropomyosin_1 PF12718.7 ORF21293 - 1.5 9.0 7.6 0.1 12.8 2.3 1.7 2 0 0 2 2 2 0 Tropomyosin like Seryl_tRNA_N PF02403.22 ORF21293 - 1.6 9.0 9.8 0.37 11.0 3.1 2.5 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Rep-A_N PF04057.12 ORF150004 - 0.11 12.6 2.3 0.41 10.7 0.3 2.5 2 0 0 2 2 2 0 Replication factor-A protein 1, N-terminal domain Ion_trans PF00520.31 ORF14350 - 2.7e-30 105.4 18.3 4.3e-30 104.7 18.3 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF14350 - 2.6e-10 39.1 1.0 0.00023 20.5 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF14350 - 9e-10 37.7 0.3 0.00055 19.7 0.0 3.5 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF14350 - 4.4e-09 36.7 4.6 1.6e-06 28.5 0.9 2.6 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF14350 - 3.9e-08 33.0 0.7 0.0028 17.5 0.2 3.0 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF14350 - 1.2e-07 30.9 1.1 0.0012 18.2 0.1 2.5 2 0 0 2 2 2 2 EF hand SesA PF17107.5 ORF14350 - 0.082 13.1 0.1 0.59 10.3 0.0 2.1 2 0 0 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases TssO PF17561.2 ORF14350 - 0.15 12.2 0.2 0.15 12.2 0.2 2.1 2 0 0 2 2 2 0 Type VI secretion system, TssO UCH PF00443.29 ORF14350 - 0.24 10.9 0.1 0.34 10.4 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase TarH PF02203.15 ORF14350 - 0.33 10.9 3.2 0.56 10.1 0.1 2.4 2 0 0 2 2 2 0 Tar ligand binding domain homologue DUF92 PF01940.16 ORF14350 - 5.6 6.3 7.4 8.6 5.7 5.5 2.2 2 1 0 2 2 2 0 Integral membrane protein DUF92 p450 PF00067.22 ORF141520 - 5.6e-49 167.1 1.2 7.1e-49 166.8 1.2 1.0 1 0 0 1 1 1 1 Cytochrome P450 Peptidase_C2 PF00648.21 ORF139630 - 2.6e-26 92.3 0.1 4.3e-26 91.6 0.1 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease EF-hand_6 PF13405.6 ORF139630 - 0.00052 19.7 0.9 0.033 14.1 0.0 3.5 3 0 0 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 ORF139630 - 0.0015 17.9 0.0 0.0055 16.1 0.0 2.0 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF139630 - 0.0033 16.8 0.2 0.023 14.2 0.0 2.6 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF139630 - 0.02 15.3 2.6 0.19 12.2 0.2 2.8 2 1 0 2 2 2 0 EF-hand domain pair Calpain_III PF01067.22 ORF139630 - 0.13 12.5 0.0 0.26 11.6 0.0 1.5 1 0 0 1 1 1 0 Calpain large subunit, domain III UQ_con PF00179.26 ORF138044 - 1e-25 90.0 0.0 2.3e-25 88.9 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 ORF138044 - 0.0075 16.1 0.0 0.016 15.1 0.0 1.5 1 0 0 1 1 1 1 UEV domain IL7 PF01415.16 ORF138044 - 0.08 13.0 2.8 0.12 12.4 0.0 2.4 3 0 0 3 3 3 0 Interleukin 7/9 family TcpE PF12648.7 ORF126918 - 0.29 11.7 3.0 7.1 7.2 0.7 2.4 2 0 0 2 2 2 0 TcpE family WES_acyltransf PF03007.16 ORF126880 - 9.4e-09 35.4 0.0 1.5e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF126880 - 9.6e-09 35.3 0.0 1.8e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Band_7_1 PF13421.6 ORF126880 - 0.025 14.3 0.1 0.049 13.3 0.1 1.5 1 0 0 1 1 1 0 SPFH domain-Band 7 family BLIP PF07467.11 ORF126880 - 0.11 13.1 0.1 5.1 7.7 0.0 2.7 3 0 0 3 3 3 0 Beta-lactamase inhibitor (BLIP) Kelch_2 PF07646.15 ORF126880 - 0.12 12.5 0.0 0.53 10.3 0.0 2.2 1 1 0 1 1 1 0 Kelch motif His_Phos_2 PF00328.22 ORF116953 - 1.2e-18 67.6 3.2 3.9e-17 62.7 0.8 2.3 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) BT1 PF03092.16 ORF116953 - 0.75 8.0 2.5 1.1 7.4 2.5 1.1 1 0 0 1 1 1 0 BT1 family Comm PF15957.5 ORF116953 - 1.5 9.2 8.1 0.64 10.4 0.5 2.7 2 1 0 2 2 2 0 Commissureless NMT PF01233.19 ORF113733 - 5.9e-69 231.0 0.1 1.7e-67 226.3 0.0 2.8 3 0 0 3 3 3 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain NMT_C PF02799.15 ORF113733 - 3.2e-63 213.0 2.7 3.2e-63 213.0 2.7 1.9 3 0 0 3 3 3 1 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain Laminin_II PF06009.12 ORF113733 - 0.0055 16.7 3.3 0.012 15.6 3.3 1.5 1 0 0 1 1 1 1 Laminin Domain II Acetyltransf_9 PF13527.7 ORF113733 - 0.0059 16.7 0.0 0.015 15.3 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF113733 - 0.052 13.8 0.0 0.1 12.8 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Viral_Beta_CD PF04530.12 ORF113733 - 0.056 13.7 0.0 0.51 10.6 0.0 2.2 2 0 0 2 2 2 0 Viral Beta C/D like family UvrD_C PF13361.6 ORF113733 - 0.1 12.0 6.0 0.07 12.5 3.7 1.8 2 0 0 2 2 2 0 UvrD-like helicase C-terminal domain TMPIT PF07851.13 ORF113733 - 0.18 11.0 8.1 0.3 10.3 8.1 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF3450 PF11932.8 ORF113733 - 0.49 9.6 7.2 0.8 9.0 7.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF948 PF06103.11 ORF113733 - 0.54 10.5 4.0 1.3 9.3 4.0 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Com_YlbF PF06133.11 ORF113733 - 1.6 9.4 13.7 6.6 7.4 13.7 2.0 1 1 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA Dfp1_Him1_M PF08630.10 ORF113733 - 1.9 8.7 9.1 0.25 11.6 3.6 2.2 3 0 0 3 3 3 0 Dfp1/Him1, central region DUF4200 PF13863.6 ORF113733 - 2 8.8 14.2 3.6 8.0 14.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) TipAS PF07739.13 ORF113733 - 3.3 8.3 6.7 1.2 9.6 2.8 2.2 2 0 0 2 2 2 0 TipAS antibiotic-recognition domain LRR_4 PF12799.7 ORF111455 - 0.84 10.1 16.1 22 5.7 0.4 6.3 3 3 3 6 6 6 0 Leucine Rich repeats (2 copies) LRR_2 PF07723.13 ORF111455 - 4.6 8.1 14.1 0.47 11.2 0.5 5.0 6 0 0 6 6 6 0 Leucine Rich Repeat MFS_1 PF07690.16 ORF111311 - 2.1e-10 40.1 13.6 2.1e-10 40.1 13.6 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily PSII PF00421.19 ORF109865 - 1.3e-147 492.6 7.8 1.4e-147 492.4 7.8 1.0 1 0 0 1 1 1 1 Photosystem II protein TPR_11 PF13414.6 ORF106259 - 5.5e-20 70.8 0.1 0.00028 20.5 0.0 5.5 5 0 0 5 5 5 5 TPR repeat TPR_17 PF13431.6 ORF106259 - 4e-13 48.8 8.6 0.026 14.9 0.1 5.1 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF106259 - 0.0041 16.9 17.4 5.3 7.0 0.1 7.9 10 0 0 10 10 10 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF106259 - 0.011 15.8 5.4 38 4.7 0.0 5.7 6 0 0 6 6 6 0 Tetratricopeptide repeat DnaB_C PF03796.15 ORF102209 - 7.3e-112 372.8 0.2 9.9e-112 372.4 0.2 1.2 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain DnaB PF00772.21 ORF102209 - 1.5e-37 127.8 0.0 3.4e-37 126.7 0.0 1.6 1 0 0 1 1 1 1 DnaB-like helicase N terminal domain AAA_25 PF13481.6 ORF102209 - 2e-09 37.3 0.0 3.7e-09 36.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF102209 - 0.0012 19.0 0.1 0.011 15.9 0.1 2.4 1 1 0 1 1 1 1 AAA domain ATPase PF06745.13 ORF102209 - 0.0015 18.0 0.0 0.0039 16.6 0.0 1.7 1 0 0 1 1 1 1 KaiC AAA_22 PF13401.6 ORF102209 - 0.099 12.9 0.0 0.25 11.6 0.0 1.7 1 1 0 1 1 1 0 AAA domain Glyco_transf_54 PF04666.13 ORF100060 - 1.3e-59 201.5 0.1 1.8e-59 201.0 0.1 1.1 1 0 0 1 1 1 1 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region LpxK PF02606.14 ORF91698 - 0.069 12.2 0.3 0.11 11.5 0.3 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase DUF1298 PF06974.13 ORF86923 - 1.7e-11 44.3 0.2 3e-11 43.5 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF86923 - 3.7e-11 43.3 0.0 5.4e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF8319 - 5.3e-06 25.3 0.2 5.3e-06 25.3 0.2 2.0 1 1 1 2 2 2 1 Alcohol acetyltransferase DUF1298 PF06974.13 ORF8319 - 5.4e-06 26.4 0.0 1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF8319 - 0.02 14.6 0.0 0.032 14.0 0.0 1.2 1 0 0 1 1 1 0 Wax ester synthase-like Acyl-CoA acyltransferase domain Amino_oxidase PF01593.24 ORF68786 - 2.9e-48 165.3 0.2 3.7e-48 165.0 0.2 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Varsurf_PPLC PF03490.13 ORF6240 - 0.052 13.5 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C WES_acyltransf PF03007.16 ORF616 - 5.5e-11 42.7 0.0 8.6e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF616 - 3.3e-08 33.6 0.1 6.2e-08 32.7 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Condensation PF00668.20 ORF616 - 0.018 13.7 0.0 0.04 12.6 0.0 1.5 1 0 0 1 1 1 0 Condensation domain S-antigen PF05756.11 ORF5658 - 0.0022 18.3 0.4 0.0022 18.3 0.4 3.1 3 1 0 3 3 3 1 S-antigen protein zf-piccolo PF05715.13 ORF5658 - 0.26 11.5 3.8 0.46 10.7 3.8 1.3 1 0 0 1 1 1 0 Piccolo Zn-finger cEGF PF12662.7 ORF5658 - 0.29 11.1 3.0 0.59 10.1 3.0 1.5 1 0 0 1 1 1 0 Complement Clr-like EGF-like ISK_Channel PF02060.15 ORF5658 - 1.2 8.8 7.7 0.17 11.6 0.9 2.6 2 0 0 2 2 2 0 Slow voltage-gated potassium channel SlyX PF04102.12 ORF53670 - 0.72 10.5 4.3 0.71 10.5 0.5 2.6 2 0 0 2 2 2 0 SlyX ALIX_LYPXL_bnd PF13949.6 ORF52387 - 6.7e-50 170.1 5.4 6.7e-50 170.1 5.4 1.6 2 0 0 2 2 2 1 ALIX V-shaped domain binding to HIV baeRF_family3 PF18845.1 ORF52387 - 0.036 14.3 0.3 0.47 10.7 0.1 2.3 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 3 RPN7 PF10602.9 ORF52387 - 0.16 11.7 3.3 0.28 10.9 0.1 2.9 4 0 0 4 4 4 0 26S proteasome subunit RPN7 MFS_1 PF07690.16 ORF49968 - 1e-21 77.3 24.1 4.1e-18 65.4 9.6 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1298 PF06974.13 ORF49413 - 5.6e-06 26.4 0.0 1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) AATase PF07247.12 ORF49413 - 3.2e-05 22.7 1.6 0.00011 21.0 0.0 2.0 1 1 1 2 2 2 1 Alcohol acetyltransferase WES_acyltransf PF03007.16 ORF49413 - 0.0013 18.5 0.0 0.002 17.9 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF47812 - 5.8e-06 26.3 0.0 1e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) AATase PF07247.12 ORF47812 - 4.2e-05 22.3 0.5 0.00011 21.0 0.0 1.7 1 1 1 2 2 2 1 Alcohol acetyltransferase WES_acyltransf PF03007.16 ORF47812 - 0.0014 18.5 0.0 0.0021 17.9 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain zf-CCCH PF00642.24 ORF40958 - 4.8e-13 48.7 7.6 2.2e-06 27.4 1.5 2.4 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF40958 - 8.4e-09 35.2 15.1 6e-05 23.0 6.1 3.1 2 1 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF40958 - 2.7e-07 30.2 8.6 0.0015 18.3 0.8 2.4 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF40958 - 0.00026 21.7 1.3 0.00026 21.7 1.3 4.5 3 1 2 5 5 5 2 Torus domain zf-CCCH_3 PF15663.5 ORF40958 - 0.047 13.9 10.9 0.035 14.3 5.6 3.1 2 2 1 3 3 3 0 Zinc-finger containing family EnY2 PF10163.9 ORF40958 - 0.078 13.4 2.9 4.3 7.8 0.2 3.1 2 1 0 2 2 2 0 Transcription factor e(y)2 zf-C3H1 PF10650.9 ORF40958 - 0.11 12.3 8.8 0.48 10.2 0.5 2.7 2 1 0 2 2 2 0 Putative zinc-finger domain zf-CCCH_2 PF14608.6 ORF40958 - 4.2 8.0 12.2 0.29 11.7 3.0 2.7 2 1 0 2 2 2 0 RNA-binding, Nab2-type zinc finger DUF3819 PF12842.7 ORF40958 - 4.6 7.2 14.2 0.15 12.0 6.4 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF3819) GED PF02212.18 ORF40958 - 6.3 7.0 9.2 12 6.2 0.2 3.2 1 1 2 3 3 3 0 Dynamin GTPase effector domain bZIP_1 PF00170.21 ORF38570 - 9.1e-11 41.7 9.9 3e-10 40.1 9.9 2.0 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF38570 - 1.9e-07 31.0 7.4 4.2e-07 29.9 7.4 1.5 1 0 0 1 1 1 1 Basic region leucine zipper TSC22 PF01166.18 ORF38570 - 0.063 13.6 1.3 0.22 11.8 0.4 2.4 2 0 0 2 2 2 0 TSC-22/dip/bun family Sugar_tr PF00083.24 ORF36281 - 2.5e-63 214.5 26.6 2.8e-63 214.3 26.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF36281 - 4.6e-16 58.7 26.0 4.2e-15 55.5 14.8 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily FUSC_2 PF13515.6 ORF19614 - 1.1 9.3 12.6 2.9 8.0 11.7 2.1 1 1 1 2 2 2 0 Fusaric acid resistance protein-like SpoIIP PF07454.11 ORF151485 - 0.016 14.7 0.2 0.016 14.7 0.2 2.2 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) Hormone_1 PF00103.20 ORF151485 - 0.13 12.0 2.1 0.27 11.0 2.1 1.5 1 0 0 1 1 1 0 Somatotropin hormone family BPL_N PF09825.9 ORF151485 - 0.15 11.1 1.3 0.23 10.5 1.3 1.3 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF1664 PF07889.12 ORF151485 - 1.2 9.2 5.6 0.81 9.7 2.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) eIF3_subunit PF08597.10 ORF151485 - 1.5 8.6 15.4 4.7 7.0 15.4 1.9 1 1 0 1 1 1 0 Translation initiation factor eIF3 subunit Cu-oxidase_3 PF07732.15 ORF147109 - 1.2e-27 96.3 0.4 5.4e-27 94.2 0.1 2.2 2 1 0 2 2 2 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 ORF147109 - 2.8e-13 49.8 0.0 5.9e-13 48.7 0.0 1.5 1 0 0 1 1 1 1 Multicopper oxidase Cu-oxidase PF00394.22 ORF147109 - 0.00015 22.0 0.0 0.00038 20.6 0.0 1.7 2 0 0 2 2 2 1 Multicopper oxidase TAT_signal PF10518.9 ORF147109 - 0.089 12.7 1.0 0.28 11.1 1.0 1.9 1 1 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Cpn60_TCP1 PF00118.24 ORF147045 - 2.3e-130 435.5 6.8 2.5e-130 435.4 6.8 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family XhlA PF10779.9 ORF143900 - 0.36 11.1 2.4 26 5.1 0.0 3.3 3 0 0 3 3 3 0 Haemolysin XhlA Myb_DNA-bind_6 PF13921.6 ORF143900 - 1.9 8.8 4.7 2 8.8 0.2 3.1 3 0 0 3 3 3 0 Myb-like DNA-binding domain TF_AP-2 PF03299.14 ORF143900 - 2.2 8.2 9.9 0.06 13.3 1.2 2.2 2 1 0 2 2 2 0 Transcription factor AP-2 Flavoprotein PF02441.19 ORF140346 - 3e-23 82.3 0.2 1.5e-22 80.0 0.0 2.0 2 0 0 2 2 2 1 Flavoprotein Varsurf_PPLC PF03490.13 ORF139396 - 0.052 13.5 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C Thioredoxin_8 PF13905.6 ORF137642 - 2.2e-36 124.1 0.5 2.2e-26 92.0 0.0 3.3 4 0 0 4 4 4 2 Thioredoxin-like Redoxin PF08534.10 ORF137642 - 1.2e-09 38.0 0.4 4.5e-08 32.9 0.0 2.9 3 0 0 3 3 3 1 Redoxin Thioredoxin_2 PF13098.6 ORF137642 - 1.3e-09 38.4 0.3 1.3e-06 28.8 0.0 3.1 3 0 0 3 3 3 2 Thioredoxin-like domain Thioredoxin PF00085.20 ORF137642 - 1.9e-08 34.2 3.2 0.00014 21.8 0.0 4.6 4 1 1 5 5 5 1 Thioredoxin AhpC-TSA PF00578.21 ORF137642 - 3.5e-08 33.4 0.0 4.4e-07 29.9 0.0 2.5 2 0 0 2 2 2 1 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF137642 - 0.0082 16.3 0.1 0.68 10.1 0.0 3.2 2 1 0 2 2 2 1 Thioredoxin-like RLL PF10036.9 ORF137642 - 0.019 14.8 0.0 1.2 8.9 0.0 2.7 2 1 0 2 2 2 0 RNA transcription, translation and transport factor protein HyaE PF07449.11 ORF137642 - 0.087 12.8 0.2 10 6.2 0.0 3.2 3 1 0 3 3 3 0 Hydrogenase-1 expression protein HyaE Thioredoxin_6 PF13848.6 ORF137642 - 0.12 12.3 0.0 1.1 9.2 0.0 2.5 3 0 0 3 3 3 0 Thioredoxin-like domain Varsurf_PPLC PF03490.13 ORF1351 - 0.052 13.5 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C HELP PF03451.14 ORF127511 - 1.2e-13 50.7 0.0 2.7e-13 49.6 0.0 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF127511 - 1.6e-06 28.7 10.5 0.4 11.6 0.0 5.9 6 1 0 6 6 6 3 WD domain, G-beta repeat Rav1p_C PF12234.8 ORF127511 - 0.074 11.4 0.0 0.15 10.5 0.0 1.4 1 1 0 1 1 1 0 RAVE protein 1 C terminal AA_permease PF00324.21 ORF126433 - 2.5e-124 415.5 45.2 2.8e-124 415.3 45.2 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF126433 - 5.1e-50 170.5 49.4 6.6e-50 170.2 49.4 1.0 1 0 0 1 1 1 1 Amino acid permease DUF1298 PF06974.13 ORF124466 - 2.1e-05 24.5 0.0 4e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) AATase PF07247.12 ORF124466 - 3.2e-05 22.7 1.6 0.00011 21.0 0.0 2.0 1 1 1 2 2 2 1 Alcohol acetyltransferase WES_acyltransf PF03007.16 ORF124466 - 0.0013 18.5 0.0 0.002 17.9 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF118364 - 3.8e-07 29.0 2.0 2e-05 23.4 0.2 2.2 1 1 1 2 2 2 2 Alcohol acetyltransferase DUF1298 PF06974.13 ORF118364 - 3.9e-06 26.9 0.1 2.8e-05 24.1 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF118364 - 5.8e-05 23.0 0.0 9.6e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DNApol_Exo PF18136.1 ORF118364 - 0.01 15.0 0.4 0.016 14.4 0.4 1.4 1 0 0 1 1 1 0 DNA mitochondrial polymerase exonuclease domain PAP2 PF01569.21 ORF93426 - 2e-16 60.0 3.3 2e-16 60.0 3.3 2.1 2 0 0 2 2 2 1 PAP2 superfamily zf-C2H2 PF00096.26 ORF83518 - 7.3e-10 38.8 9.7 0.029 14.8 0.6 3.7 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF83518 - 6.1e-08 32.9 10.7 0.084 13.8 0.1 3.8 3 0 0 3 3 3 3 C2H2-type zinc finger zf-Di19 PF05605.12 ORF83518 - 6.4e-07 29.6 5.2 3.4e-06 27.3 0.8 2.4 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-H2C2_2 PF13465.6 ORF83518 - 8.2e-07 29.2 12.7 0.0057 17.0 0.4 4.0 4 0 0 4 4 4 2 Zinc-finger double domain TerY_C PF15616.6 ORF83518 - 0.021 15.0 0.1 0.039 14.0 0.1 1.5 1 0 0 1 1 1 0 TerY-C metal binding domain zf-C2H2_9 PF16293.5 ORF83518 - 0.086 12.7 0.2 12 5.9 0.0 2.9 1 1 2 3 3 3 0 C2H2 type zinc-finger (1 copy) Zn_Tnp_IS1595 PF12760.7 ORF83518 - 0.19 11.7 8.6 0.051 13.6 4.6 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-met PF12874.7 ORF83518 - 0.22 12.0 0.9 61 4.2 0.0 3.3 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF83518 - 0.26 11.6 4.8 18 5.7 4.8 3.1 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf_UBZ PF18439.1 ORF83518 - 0.42 10.3 8.1 4.7 6.9 0.4 3.4 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-LITAF-like PF10601.9 ORF83518 - 0.76 10.1 5.0 17 5.7 0.1 3.3 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain zinc_ribbon_4 PF13717.6 ORF83518 - 0.79 9.7 6.8 4 7.5 1.9 3.0 2 1 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 ORF83518 - 1.2 9.1 9.6 1.6 8.7 4.5 2.9 2 1 0 2 2 2 0 SprT-like zinc ribbon domain DZR PF12773.7 ORF83518 - 1.4 9.0 6.2 24 5.1 6.1 2.6 1 1 0 1 1 1 0 Double zinc ribbon zf-FPG_IleRS PF06827.14 ORF83518 - 1.8 8.5 7.2 5 7.1 0.8 2.8 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS zf-C2H2_6 PF13912.6 ORF83518 - 2.3 8.3 8.8 10 6.3 0.2 3.2 3 0 0 3 3 3 0 C2H2-type zinc finger CpXC PF14353.6 ORF83518 - 4.1 7.5 4.9 61 3.7 0.2 3.0 1 1 0 2 2 2 0 CpXC protein TRP PF06011.12 ORF77079 - 3.2e-05 22.8 20.8 9e-05 21.4 8.4 2.1 2 0 0 2 2 2 2 Transient receptor potential (TRP) ion channel RIFIN PF02009.16 ORF77079 - 0.0035 17.3 0.2 0.0035 17.3 0.2 2.0 3 0 0 3 3 3 1 Rifin DUF3310 PF11753.8 ORF77079 - 0.0078 16.4 0.3 0.084 13.1 0.1 2.4 2 0 0 2 2 2 1 Protein of unknwon function (DUF3310) FeoB_associated PF12669.7 ORF77079 - 0.084 13.3 0.4 0.084 13.3 0.4 3.6 4 0 0 4 4 3 0 FeoB-associated Cys-rich membrane protein Glycophorin_A PF01102.18 ORF77079 - 0.42 10.9 5.6 34 4.7 0.1 3.5 3 0 0 3 3 3 0 Glycophorin A HemY_N PF07219.13 ORF77079 - 0.99 9.6 2.4 54 4.0 0.5 3.5 3 0 0 3 3 3 0 HemY protein N-terminus UPF0542 PF15086.6 ORF77079 - 1 9.3 6.6 4.1 7.4 0.1 3.4 3 0 0 3 3 3 0 Uncharacterised protein family UPF0542 PgaD PF13994.6 ORF77079 - 1.2 9.2 8.4 0.29 11.2 2.6 2.8 2 1 1 3 3 3 0 PgaD-like protein OAD_gamma PF04277.13 ORF77079 - 4.8 7.9 13.4 8.6 7.0 0.0 4.3 6 0 0 6 6 4 0 Oxaloacetate decarboxylase, gamma chain Bac_export_2 PF01312.19 ORF77079 - 8.6 5.5 11.4 0.15 11.3 1.3 2.3 2 1 0 2 2 2 0 FlhB HrpN YscU SpaS Family EphA2_TM PF14575.6 ORF77079 - 9.8 7.1 9.8 6.2 7.8 1.7 3.8 3 1 0 3 3 2 0 Ephrin type-A receptor 2 transmembrane domain MFS_1 PF07690.16 ORF66913 - 1.4e-30 106.4 37.7 1.4e-30 106.4 37.7 2.1 2 0 0 2 2 2 2 Major Facilitator Superfamily Acatn PF13000.7 ORF66913 - 1.7e-12 46.7 9.3 2e-10 39.8 2.0 2.4 2 1 1 3 3 3 2 Acetyl-coenzyme A transporter 1 Pup PF05639.11 ORF51068 - 0.078 13.9 4.7 0.27 12.2 4.7 1.9 1 1 0 1 1 1 0 Pup-like protein DUF4407 PF14362.6 ORF51068 - 0.09 12.1 3.2 0.89 8.8 4.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) 3HCDH_N PF02737.18 ORF51068 - 1.9 8.3 7.0 4 7.3 7.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OAD_gamma PF04277.13 ORF47038 - 0.0013 19.2 4.6 8.6 7.0 0.0 4.5 5 0 0 5 5 5 2 Oxaloacetate decarboxylase, gamma chain RIFIN PF02009.16 ORF47038 - 0.0035 17.3 0.2 0.0035 17.3 0.2 1.7 2 0 0 2 2 2 1 Rifin EphA2_TM PF14575.6 ORF47038 - 0.032 15.1 2.8 6.2 7.8 1.7 3.9 2 1 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain FeoB_associated PF12669.7 ORF47038 - 0.084 13.3 0.4 0.084 13.3 0.4 3.7 5 0 0 5 5 5 0 FeoB-associated Cys-rich membrane protein HemY_N PF07219.13 ORF47038 - 0.097 12.9 1.1 54 4.0 0.5 3.7 3 0 0 3 3 3 0 HemY protein N-terminus UPF0542 PF15086.6 ORF47038 - 0.4 10.6 5.2 3.9 7.5 0.0 3.4 3 0 0 3 3 3 0 Uncharacterised protein family UPF0542 DUF4834 PF16118.5 ORF47038 - 1.4 9.9 0.0 1.4 9.9 0.0 4.3 3 1 2 5 5 5 0 Domain of unknown function (DUF4834) Glyco_hydro_38N PF01074.22 ORF32060 - 1.7e-09 37.5 1.3 2.9e-09 36.7 1.3 1.5 1 1 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Gln-synt_C PF00120.24 ORF26682 - 2.2e-140 467.6 0.0 2.6e-140 467.3 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 ORF26682 - 3.6e-32 110.0 0.1 7.4e-32 108.9 0.1 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain HMG_CoA_synt_N PF01154.17 ORF25621 - 2.4e-85 284.8 0.7 3.5e-85 284.3 0.7 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal HMG_CoA_synt_C PF08540.10 ORF25621 - 1.5e-81 274.1 3.4 1.8e-81 273.8 3.4 1.1 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.17 ORF24630 - 2.4e-85 284.8 0.7 3.5e-85 284.3 0.7 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal HMG_CoA_synt_C PF08540.10 ORF24630 - 1.5e-81 274.1 3.4 1.8e-81 273.8 3.4 1.1 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal WES_acyltransf PF03007.16 ORF147285 - 6.5e-06 26.1 0.0 1.9e-05 24.6 0.0 1.6 1 1 1 2 2 2 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF147285 - 0.00023 19.9 0.2 0.00023 19.9 0.2 1.9 1 1 1 2 2 2 1 Alcohol acetyltransferase DAO PF01266.24 ORF145956 - 6.6e-33 114.7 0.0 8.2e-33 114.4 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF145956 - 3.2e-06 26.6 0.0 0.0024 17.2 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF145956 - 5.9e-06 26.4 0.0 1.4e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 ORF145956 - 7.5e-05 21.8 0.1 0.096 11.5 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase NAD_binding_9 PF13454.6 ORF145956 - 0.00036 20.5 0.0 0.011 15.8 0.0 2.5 2 1 0 2 2 2 1 FAD-NAD(P)-binding Thi4 PF01946.17 ORF145956 - 0.00037 19.8 0.0 0.00074 18.8 0.0 1.4 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 ORF145956 - 0.00055 19.1 0.5 0.041 13.0 0.0 2.5 3 0 0 3 3 3 1 Glucose inhibited division protein A ApbA PF02558.16 ORF145956 - 0.025 14.2 0.0 0.042 13.5 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_2 PF00890.24 ORF145956 - 0.027 13.5 0.0 0.044 12.9 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.27 ORF145956 - 0.037 14.6 0.2 0.17 12.4 0.0 2.3 4 0 0 4 4 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 ORF145956 - 0.042 14.3 0.0 0.15 12.5 0.0 2.1 1 1 0 1 1 1 0 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 ORF145956 - 0.058 12.7 0.0 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 ORF145956 - 0.066 12.5 0.0 0.12 11.6 0.0 1.4 1 0 0 1 1 1 0 FAD binding domain Mqo PF06039.15 ORF145956 - 0.076 11.6 0.0 0.12 10.9 0.0 1.2 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) Shikimate_DH PF01488.20 ORF145956 - 0.11 12.5 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Aminotran_1_2 PF00155.21 ORF143665 - 1.1e-29 103.8 0.0 1.4e-29 103.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II YkyA PF10368.9 ORF141441 - 0.1 12.3 0.7 30 4.2 0.1 3.3 3 0 0 3 3 3 0 Putative cell-wall binding lipoprotein PMEI PF04043.15 ORF141441 - 0.22 11.9 0.0 1.8 8.9 0.0 2.3 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Glycos_trans_3N PF02885.17 ORF141441 - 0.26 11.1 1.9 1.4 8.8 0.3 2.9 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain Peptidase_C2 PF00648.21 ORF131511 - 4.4e-26 91.6 0.3 7.2e-26 90.9 0.3 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF131511 - 0.0076 16.5 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 Calpain large subunit, domain III EF-hand_6 PF13405.6 ORF131511 - 0.083 12.9 0.9 1.2 9.2 0.1 3.0 3 0 0 3 3 3 0 EF-hand domain Sugar_tr PF00083.24 ORF113418 - 2.6e-41 142.0 16.9 7.4e-22 77.8 3.0 2.0 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF113418 - 6e-07 28.7 32.2 6e-07 28.7 32.2 2.3 1 1 1 2 2 2 1 Major Facilitator Superfamily Glycos_transf_N PF04413.16 ORF109109 - 1.3e-69 233.4 0.0 6.9e-69 231.0 0.0 1.9 2 0 0 2 2 2 1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Glycos_transf_1 PF00534.20 ORF109109 - 1.6e-05 24.5 0.0 2.9e-05 23.7 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF109109 - 0.022 15.2 0.2 0.13 12.7 0.1 2.2 1 1 1 2 2 2 0 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 ORF109109 - 0.05 13.6 0.1 0.18 11.8 0.1 2.0 2 0 0 2 2 2 0 Glycosyltransferase Family 4 DUF2600 PF10776.9 ORF108328 - 0.13 11.1 0.0 0.22 10.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2600) Macro PF01661.21 ORF78097 - 6.9e-16 58.4 1.9 7.9e-16 58.2 0.1 2.0 2 0 0 2 2 2 1 Macro domain DUF1152 PF06626.12 ORF76027 - 0.14 11.3 0.0 0.26 10.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1152) RRM_1 PF00076.22 ORF69397 - 1.6e-13 50.2 0.0 4e-13 49.0 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Metallophos PF00149.28 ORF54572 - 6.2e-33 115.0 0.2 2.1e-32 113.3 0.1 1.8 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase DUF5378 PF17349.2 ORF54572 - 0.0069 15.7 0.1 0.011 15.1 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5378) DUF1298 PF06974.13 ORF51237 - 2.3e-13 50.3 0.6 6.4e-13 48.9 0.2 1.9 3 0 0 3 3 3 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF51237 - 2e-10 40.9 0.0 3.4e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain S1 PF00575.23 ORF40090 - 8.7e-05 22.8 0.0 0.064 13.6 0.0 2.7 2 0 0 2 2 2 2 S1 RNA binding domain CCDC71L PF15374.6 ORF40090 - 0.0043 16.4 0.2 0.0054 16.0 0.2 1.2 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 71L PCB_OB PF17092.5 ORF40090 - 0.018 15.8 0.0 0.14 12.9 0.0 2.3 2 0 0 2 2 2 0 Penicillin-binding protein OB-like domain efb-c PF12199.8 ORF40090 - 0.25 11.4 0.9 0.42 10.7 0.9 1.3 1 0 0 1 1 1 0 Extracellular fibrinogen binding protein C terminal CAP PF00188.26 ORF32316 - 3.7e-13 50.4 0.6 3.7e-13 50.4 0.6 2.8 3 1 0 3 3 3 1 Cysteine-rich secretory protein family PUB PF09409.10 ORF32316 - 6.6e-08 32.4 4.2 4.2e-07 29.8 2.6 3.0 2 1 0 2 2 2 1 PUB domain FAD_SOX PF18371.1 ORF32316 - 0.01 16.2 0.0 0.052 13.9 0.0 2.2 1 0 0 1 1 1 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase DUF2001 PF09393.10 ORF32316 - 0.026 14.5 0.7 0.061 13.3 0.7 1.6 1 0 0 1 1 1 0 Phage tail tube protein TauD PF02668.16 ORF18144 - 6.7e-17 62.2 1.6 8.8e-15 55.2 0.2 3.0 2 1 0 2 2 2 1 Taurine catabolism dioxygenase TauD, TfdA family DnaJ PF00226.31 ORF18144 - 0.0011 19.0 0.1 0.0023 18.0 0.1 1.5 1 0 0 1 1 1 1 DnaJ domain DUF3837 PF12939.7 ORF18144 - 0.088 13.2 0.4 0.21 12.0 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3837) Cgr1 PF03879.14 ORF18144 - 2 8.8 4.6 3.5 8.0 4.6 1.4 1 0 0 1 1 1 0 Cgr1 family MFS_2 PF13347.6 ORF135934 - 1.7e-80 270.7 27.5 2e-80 270.5 27.5 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 ORF135934 - 4.9e-11 42.2 49.0 8.1e-10 38.2 27.6 2.8 1 1 2 3 3 3 3 Major Facilitator Superfamily Apolipoprotein PF01442.18 ORF130492 - 0.012 15.5 15.8 0.062 13.2 15.8 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain HSP70 PF00012.20 ORF130492 - 0.28 9.3 15.7 0.38 8.9 15.7 1.1 1 0 0 1 1 1 0 Hsp70 protein Baculo_PEP_C PF04513.12 ORF130492 - 0.5 10.4 8.7 3.6 7.6 2.3 2.7 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1512 PF07431.12 ORF130492 - 0.72 8.8 5.2 1.6 7.7 5.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1512) KfrA_N PF11740.8 ORF130492 - 1.9 9.2 6.3 4.2 8.1 6.3 1.6 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term Mitofilin PF09731.9 ORF130492 - 3.8 6.2 28.7 0.47 9.2 22.6 1.9 2 0 0 2 2 2 0 Mitochondrial inner membrane protein MFS_1 PF07690.16 ORF12607 - 1.8e-17 63.3 31.3 5e-09 35.5 12.5 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF12607 - 0.001 17.7 7.9 0.001 17.7 7.9 3.4 2 2 1 3 3 3 1 MFS/sugar transport protein Aa_trans PF01490.18 ORF119938 - 2.1e-33 115.7 23.1 2.7e-33 115.3 23.1 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein FUSC PF04632.12 ORF11545 - 0.25 9.8 3.7 0.54 8.7 3.7 1.5 1 0 0 1 1 1 0 Fusaric acid resistance protein family Spc7 PF08317.11 ORF11545 - 1.3 7.9 11.5 0.12 11.2 4.6 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF1298 PF06974.13 ORF115142 - 2.3e-13 50.3 0.6 6.4e-13 48.9 0.2 1.9 3 0 0 3 3 3 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF115142 - 2e-10 40.9 0.0 3.4e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain p450 PF00067.22 ORF10539 - 1.7e-57 195.2 0.0 2.5e-57 194.7 0.0 1.2 1 0 0 1 1 1 1 Cytochrome P450 WES_acyltransf PF03007.16 ORF95448 - 3.4e-07 30.3 0.0 5.6e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF95448 - 8e-06 25.9 0.0 1.7e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) PAN_2 PF08276.11 ORF6316 - 3.6e-06 27.0 14.9 0.48 10.6 1.8 4.5 4 0 0 4 4 4 4 PAN-like domain PAN_4 PF14295.6 ORF6316 - 0.073 13.0 19.0 3 7.8 0.8 4.6 4 0 0 4 4 4 0 PAN domain MANEC PF07502.14 ORF6316 - 0.6 10.4 13.2 4.8 7.5 0.1 3.7 4 0 0 4 4 4 0 MANEC domain p450 PF00067.22 ORF54432 - 6e-36 124.2 0.2 8.3e-36 123.7 0.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 Sin_N PF04801.13 ORF43532 - 2.4e-24 86.4 2.9 1.3e-19 70.8 1.0 2.1 2 0 0 2 2 2 2 Sin-like protein conserved region Gon7 PF08738.10 ORF43532 - 0.094 12.8 0.0 7.2 6.8 0.0 2.7 2 0 0 2 2 2 0 Gon7 family MORN PF02493.20 ORF4088 - 6.5e-08 32.0 10.1 0.00063 19.5 1.9 4.6 4 0 0 4 4 4 3 MORN repeat AFG1_ATPase PF03969.16 ORF40848 - 3e-88 296.1 2.0 3.2e-88 296.1 1.0 1.4 2 0 0 2 2 2 1 AFG1-like ATPase AAA PF00004.29 ORF40848 - 1.1e-05 25.9 0.0 3.4e-05 24.3 0.0 1.9 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF40848 - 2.5e-05 24.5 0.9 0.015 15.5 0.0 3.5 3 1 1 4 4 4 1 AAA domain IstB_IS21 PF01695.17 ORF40848 - 0.0043 16.8 0.0 0.012 15.3 0.0 1.7 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_19 PF13245.6 ORF40848 - 0.011 16.0 2.3 3 8.2 0.0 2.9 3 1 1 4 4 4 0 AAA domain Torsin PF06309.11 ORF40848 - 0.014 15.5 0.0 0.04 14.0 0.0 1.7 1 0 0 1 1 1 0 Torsin Viral_helicase1 PF01443.18 ORF40848 - 0.014 15.1 0.1 0.038 13.7 0.0 1.8 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.6 ORF40848 - 0.017 15.5 0.0 0.072 13.5 0.0 1.9 1 1 0 2 2 2 0 AAA ATPase domain Pro_sub2 PF18513.1 ORF40848 - 0.028 14.6 1.2 0.088 13.0 1.2 1.8 1 0 0 1 1 1 0 Prodomain subtilisin 2 RNA_helicase PF00910.22 ORF40848 - 0.075 13.4 0.0 0.26 11.7 0.0 2.1 1 0 0 1 1 1 0 RNA helicase AAA_5 PF07728.14 ORF40848 - 0.11 12.5 0.2 2.1 8.3 0.0 2.7 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 ORF40848 - 0.17 12.1 0.0 1.4 9.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain 5_nucleotid_C PF02872.18 ORF26288 - 1e-11 45.3 0.0 2e-11 44.4 0.0 1.4 1 1 0 1 1 1 1 5'-nucleotidase, C-terminal domain EF-hand_7 PF13499.6 ORF26288 - 4.3e-08 33.5 0.0 0.00049 20.5 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF26288 - 3.9e-06 26.4 0.1 0.12 12.4 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF26288 - 4.7e-05 22.7 0.0 0.051 13.1 0.0 3.6 3 0 0 3 3 3 1 EF hand MFS_1 PF07690.16 ORF23457 - 3.1e-39 134.9 67.2 7.6e-37 127.0 43.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF23457 - 1.5e-13 50.4 32.4 2.4e-10 39.9 32.4 2.2 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_4 PF06779.14 ORF23457 - 4e-07 29.7 41.3 5.3e-07 29.3 41.3 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_Mycoplasma PF07672.13 ORF23457 - 0.03 13.6 1.0 0.076 12.3 1.0 1.6 1 0 0 1 1 1 0 Mycoplasma MFS transporter P5-ATPase PF12409.8 ORF23457 - 0.12 12.5 6.2 5 7.2 1.2 2.6 2 0 0 2 2 2 0 P5-type ATPase cation transporter MFS_1_like PF12832.7 ORF23457 - 2 7.2 14.7 1.5 7.6 3.5 2.2 2 0 0 2 2 2 0 MFS_1 like family AFG1_ATPase PF03969.16 ORF19486 - 3e-88 296.1 2.0 3.2e-88 296.1 1.0 1.4 2 0 0 2 2 2 1 AFG1-like ATPase AAA PF00004.29 ORF19486 - 1.1e-05 25.9 0.0 3.4e-05 24.3 0.0 1.9 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF19486 - 2.4e-05 24.6 0.8 0.015 15.5 0.0 3.5 3 1 1 4 4 4 1 AAA domain IstB_IS21 PF01695.17 ORF19486 - 0.0043 16.8 0.0 0.012 15.3 0.0 1.7 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_19 PF13245.6 ORF19486 - 0.012 16.0 2.3 3 8.2 0.0 2.9 3 1 1 4 4 4 0 AAA domain Torsin PF06309.11 ORF19486 - 0.014 15.5 0.0 0.04 14.0 0.0 1.7 1 0 0 1 1 1 0 Torsin Viral_helicase1 PF01443.18 ORF19486 - 0.014 15.1 0.1 0.038 13.7 0.0 1.8 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.6 ORF19486 - 0.017 15.5 0.0 0.072 13.5 0.0 1.9 1 1 0 2 2 2 0 AAA ATPase domain Pro_sub2 PF18513.1 ORF19486 - 0.028 14.6 1.2 0.088 13.0 1.2 1.8 1 0 0 1 1 1 0 Prodomain subtilisin 2 RNA_helicase PF00910.22 ORF19486 - 0.075 13.4 0.0 0.26 11.7 0.0 2.1 1 0 0 1 1 1 0 RNA helicase AAA_5 PF07728.14 ORF19486 - 0.11 12.6 0.2 2.1 8.3 0.0 2.7 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 ORF19486 - 0.17 12.1 0.0 1.4 9.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain Lyase_1 PF00206.20 ORF143357 - 2.7e-58 197.8 0.0 3.9e-58 197.3 0.0 1.2 1 0 0 1 1 1 1 Lyase ASL_C PF08328.11 ORF143357 - 2e-43 147.2 0.8 6.6e-43 145.5 0.0 2.3 3 1 0 3 3 3 1 Adenylosuccinate lyase C-terminal Complex1_LYR_2 PF13233.6 ORF143357 - 0.21 12.3 1.3 13 6.6 0.2 2.5 2 0 0 2 2 2 0 Complex1_LYR-like p450 PF00067.22 ORF140732 - 6e-36 124.2 0.2 8.3e-36 123.7 0.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 SecY PF00344.20 ORF138075 - 3.5e-55 187.4 13.8 4.6e-55 187.0 13.8 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 ORF138075 - 4.5e-16 58.4 0.1 4.5e-16 58.4 0.1 2.6 2 0 0 2 2 2 1 Plug domain of Sec61p TusA PF01206.17 ORF136232 - 8.3e-24 83.2 0.0 1.3e-23 82.6 0.0 1.3 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 ORF136232 - 0.0011 18.8 0.1 0.0022 17.8 0.1 1.5 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) PAF-AH_p_II PF03403.13 ORF119613 - 3.1e-34 118.1 0.7 1.1e-32 113.0 0.7 2.1 1 1 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 ORF119613 - 6.7e-06 25.2 0.0 1.3e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Chlorophyllase enzyme Hydrolase_4 PF12146.8 ORF119613 - 3e-05 23.4 0.0 0.0022 17.3 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Esterase PF00756.20 ORF119613 - 7.1e-05 22.6 0.0 0.0011 18.6 0.0 2.1 1 1 1 2 2 2 1 Putative esterase Abhydrolase_2 PF02230.16 ORF119613 - 0.0011 18.8 0.0 0.0041 16.9 0.0 1.8 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.20 ORF119613 - 0.0021 17.7 0.0 0.0039 16.9 0.0 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF119613 - 0.0027 18.4 0.0 0.0049 17.5 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF119613 - 0.0031 17.0 0.0 0.0061 16.1 0.0 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase family Chlorophyllase PF07224.11 ORF119613 - 0.0062 15.6 0.0 1.4 7.9 0.0 2.2 2 0 0 2 2 2 2 Chlorophyllase Prion PF00377.18 ORF119613 - 0.014 15.3 0.8 0.62 9.9 0.3 2.5 2 0 0 2 2 2 0 Prion/Doppel alpha-helical domain DUF676 PF05057.14 ORF119613 - 0.015 14.8 0.0 0.034 13.7 0.0 1.6 1 0 0 1 1 1 0 Putative serine esterase (DUF676) PGAP1 PF07819.13 ORF119613 - 0.029 14.1 0.4 0.06 13.1 0.4 1.5 1 1 0 1 1 1 0 PGAP1-like protein LIDHydrolase PF10230.9 ORF119613 - 0.037 13.6 0.0 0.064 12.8 0.0 1.4 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Abhydrolase_5 PF12695.7 ORF119613 - 0.04 13.7 0.0 0.58 9.9 0.0 2.2 2 0 0 2 2 2 0 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF119613 - 0.046 13.8 0.0 0.1 12.7 0.0 1.6 1 0 0 1 1 1 0 Thioesterase domain Abhydrolase_3 PF07859.13 ORF119613 - 0.092 12.6 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold p450 PF00067.22 ORF119145 - 6e-36 124.2 0.2 8.3e-36 123.7 0.2 1.1 1 0 0 1 1 1 1 Cytochrome P450 AFG1_ATPase PF03969.16 ORF116697 - 3e-88 296.1 2.0 3.2e-88 296.1 1.0 1.4 2 0 0 2 2 2 1 AFG1-like ATPase AAA PF00004.29 ORF116697 - 1.1e-05 25.9 0.0 3.4e-05 24.3 0.0 1.9 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF116697 - 2.4e-05 24.6 0.8 0.015 15.5 0.0 3.5 3 1 1 4 4 4 1 AAA domain IstB_IS21 PF01695.17 ORF116697 - 0.0043 16.8 0.0 0.012 15.3 0.0 1.7 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_19 PF13245.6 ORF116697 - 0.012 16.0 2.4 3 8.2 0.0 2.9 3 1 1 4 4 4 0 AAA domain Viral_helicase1 PF01443.18 ORF116697 - 0.013 15.2 0.0 0.038 13.7 0.0 1.7 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Torsin PF06309.11 ORF116697 - 0.014 15.5 0.0 0.04 14.0 0.0 1.7 1 0 0 1 1 1 0 Torsin AAA_16 PF13191.6 ORF116697 - 0.017 15.5 0.0 0.072 13.5 0.0 1.9 1 1 0 2 2 2 0 AAA ATPase domain Pro_sub2 PF18513.1 ORF116697 - 0.028 14.6 1.2 0.088 13.0 1.2 1.8 1 0 0 1 1 1 0 Prodomain subtilisin 2 RNA_helicase PF00910.22 ORF116697 - 0.076 13.4 0.0 0.26 11.7 0.0 2.1 1 0 0 1 1 1 0 RNA helicase AAA_5 PF07728.14 ORF116697 - 0.11 12.6 0.2 2.1 8.3 0.0 2.7 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 ORF116697 - 0.17 12.1 0.0 1.4 9.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain WES_acyltransf PF03007.16 ORF11420 - 3.4e-07 30.3 0.0 5.5e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF11420 - 8.2e-06 25.8 0.0 1.7e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) DUF4142 PF13628.6 ORF107396 - 0.25 11.6 2.8 1.1 9.5 0.7 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4142) DDE_Tnp_1 PF01609.21 ORF1004 - 1.1e-26 93.8 0.0 1.9e-26 93.0 0.0 1.3 1 0 0 1 1 1 1 Transposase DDE domain HEPN_DZIP3 PF18738.1 ORF1004 - 0.058 13.1 0.0 0.14 11.9 0.0 1.7 1 0 0 1 1 1 0 DZIP3/ hRUL138-like HEPN Dimerisation PF08100.11 ORF1004 - 0.1 12.6 0.2 0.55 10.3 0.0 2.3 2 0 0 2 2 2 0 Dimerisation domain SPATIAL PF15256.6 ORF87127 - 0.073 13.4 1.2 0.16 12.3 0.7 1.7 2 0 0 2 2 2 0 SPATIAL Peptidase_S10 PF00450.22 ORF87011 - 4.9e-112 375.4 0.7 5.8e-112 375.1 0.7 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase WES_acyltransf PF03007.16 ORF84381 - 2e-10 40.9 0.0 3.3e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF84381 - 5.1e-08 33.0 0.7 1.4e-07 31.5 0.2 1.9 3 0 0 3 3 3 1 Protein of unknown function (DUF1298) Pkinase PF00069.25 ORF82447 - 5.2e-23 81.8 2.5 8.5e-23 81.0 2.5 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF82447 - 4.5e-08 32.3 0.6 7.1e-08 31.6 0.0 1.7 2 1 0 2 2 2 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF82447 - 2.6e-06 26.9 2.0 4.3e-06 26.2 0.3 2.0 2 0 0 2 2 2 1 Protein tyrosine kinase FTA2 PF13095.6 ORF82447 - 4.5e-05 23.2 0.3 0.00031 20.4 0.2 2.1 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF82447 - 0.00058 19.3 0.1 0.04 13.2 0.0 2.2 2 0 0 2 2 2 1 Kinase-like DUF3347 PF11827.8 ORF82447 - 0.0023 18.1 1.7 0.014 15.5 0.1 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3347) Kdo PF06293.14 ORF82447 - 0.012 15.0 0.1 0.035 13.4 0.1 1.8 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF1664 PF07889.12 ORF67036 - 0.014 15.4 0.3 0.024 14.7 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Ion_trans PF00520.31 ORF67036 - 0.019 14.2 15.3 0.19 10.9 15.3 2.1 1 1 0 1 1 1 0 Ion transport protein FAM184 PF15665.5 ORF67036 - 0.049 13.4 1.5 0.072 12.9 1.5 1.1 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Jnk-SapK_ap_N PF09744.9 ORF67036 - 0.066 13.4 1.9 0.098 12.9 1.9 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Lebercilin PF15619.6 ORF67036 - 0.1 12.3 3.7 0.14 11.8 3.7 1.1 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease BLOC1_2 PF10046.9 ORF67036 - 0.13 12.6 0.4 0.22 11.8 0.4 1.3 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 EzrA PF06160.12 ORF67036 - 0.16 10.1 1.1 0.22 9.7 1.1 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Fib_alpha PF08702.10 ORF67036 - 0.2 11.9 0.5 0.3 11.3 0.5 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family TIP49 PF06068.13 ORF54657 - 1.7e-158 527.5 4.9 1.7e-158 527.5 4.9 1.3 2 0 0 2 2 2 1 TIP49 P-loop domain TIP49_C PF17856.1 ORF54657 - 1.2e-27 95.8 0.6 3.4e-27 94.4 0.6 1.9 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 ORF54657 - 1.5e-09 38.4 4.0 8.5e-06 26.2 0.5 2.9 2 1 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) DnaB_C PF03796.15 ORF54657 - 2.7e-06 26.9 2.1 3.5e-06 26.5 0.9 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain RuvB_N PF05496.12 ORF54657 - 3.7e-06 26.8 0.4 0.015 15.1 0.1 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF54657 - 3.9e-05 23.9 0.1 0.088 13.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 ORF54657 - 0.00029 21.3 0.3 0.0017 18.8 0.2 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF54657 - 0.00039 20.4 0.1 0.29 11.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 ORF54657 - 0.00041 20.7 1.9 0.021 15.2 1.9 2.5 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF54657 - 0.00084 19.1 0.1 1.7 8.3 0.1 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF54657 - 0.0022 17.4 1.1 0.21 11.0 0.5 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 ORF54657 - 0.003 16.9 0.5 0.007 15.7 0.5 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_25 PF13481.6 ORF54657 - 0.0038 16.8 0.1 0.0074 15.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 ORF54657 - 0.017 14.4 0.0 0.029 13.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF54657 - 0.04 13.4 0.1 0.19 11.2 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_11 PF13086.6 ORF54657 - 0.081 12.7 1.3 0.46 10.2 1.3 2.1 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF54657 - 0.096 13.1 1.5 0.23 11.9 0.9 2.1 2 1 0 2 2 1 0 AAA domain ResIII PF04851.15 ORF54657 - 0.13 12.3 0.7 2.9 7.9 0.7 2.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Aconitase PF00330.20 ORF45180 - 1.6e-162 541.7 0.4 1.8e-162 541.5 0.4 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Spo0M PF07070.11 ORF45180 - 0.13 11.7 0.8 0.23 11.0 0.8 1.3 1 0 0 1 1 1 0 SpoOM protein DUF2202 PF09968.9 ORF37142 - 0.047 13.5 1.1 0.16 11.8 0.5 2.1 2 0 0 2 2 2 0 Uncharacterized protein domain (DUF2202) Porin_7 PF16956.5 ORF37142 - 0.19 11.4 1.9 0.22 11.2 0.8 1.6 2 0 0 2 2 2 0 Putative general bacterial porin Peptidase_S10 PF00450.22 ORF36930 - 4.9e-112 375.4 0.7 5.8e-112 375.1 0.7 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Ion_trans_2 PF07885.16 ORF24485 - 1e-13 51.1 5.3 3.6e-13 49.3 5.3 1.9 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF24485 - 1.9e-08 33.9 15.5 1.3e-07 31.2 15.3 2.3 1 1 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 ORF24485 - 0.0082 16.0 0.3 0.0082 16.0 0.3 2.1 2 1 0 2 2 2 1 Ligand-gated ion channel SK_channel PF03530.14 ORF24485 - 0.18 11.8 3.4 0.42 10.6 1.3 2.4 1 1 0 2 2 2 0 Calcium-activated SK potassium channel TIP49 PF06068.13 ORF23791 - 1.7e-158 527.5 4.9 1.7e-158 527.5 4.9 1.3 2 0 0 2 2 2 1 TIP49 P-loop domain TIP49_C PF17856.1 ORF23791 - 1.2e-27 95.8 0.6 3.4e-27 94.4 0.6 1.9 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 ORF23791 - 1.5e-09 38.4 4.0 8.5e-06 26.2 0.5 2.9 2 1 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) DnaB_C PF03796.15 ORF23791 - 2.7e-06 26.9 2.1 3.5e-06 26.5 0.9 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain RuvB_N PF05496.12 ORF23791 - 3.7e-06 26.8 0.4 0.015 15.1 0.1 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF23791 - 3.9e-05 23.9 0.1 0.088 13.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 ORF23791 - 0.00029 21.3 0.3 0.0017 18.8 0.2 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF23791 - 0.00039 20.4 0.1 0.29 11.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 ORF23791 - 0.00041 20.7 1.9 0.021 15.2 1.9 2.5 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF23791 - 0.00084 19.1 0.1 1.7 8.3 0.1 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF23791 - 0.0022 17.4 1.1 0.21 11.0 0.5 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 ORF23791 - 0.003 16.9 0.5 0.007 15.7 0.5 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_25 PF13481.6 ORF23791 - 0.0038 16.8 0.1 0.0074 15.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 ORF23791 - 0.017 14.4 0.0 0.029 13.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF23791 - 0.04 13.4 0.1 0.19 11.2 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_11 PF13086.6 ORF23791 - 0.081 12.7 1.3 0.46 10.2 1.3 2.1 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF23791 - 0.096 13.1 1.5 0.23 11.9 0.9 2.1 2 1 0 2 2 1 0 AAA domain ResIII PF04851.15 ORF23791 - 0.13 12.3 0.7 2.9 7.9 0.7 2.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Solute_trans_a PF03619.16 ORF16951 - 1.8e-12 47.4 1.0 1.8e-12 47.4 1.0 1.7 2 0 0 2 2 2 1 Organic solute transporter Ostalpha TIP49 PF06068.13 ORF136331 - 1.7e-158 527.5 4.9 1.7e-158 527.5 4.9 1.3 2 0 0 2 2 2 1 TIP49 P-loop domain TIP49_C PF17856.1 ORF136331 - 1.2e-27 95.8 0.6 3.4e-27 94.4 0.6 1.9 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 ORF136331 - 1.5e-09 38.4 4.0 8.5e-06 26.2 0.5 2.9 2 1 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) DnaB_C PF03796.15 ORF136331 - 2.7e-06 26.9 2.1 3.5e-06 26.5 0.9 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain RuvB_N PF05496.12 ORF136331 - 3.7e-06 26.8 0.4 0.015 15.1 0.1 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF136331 - 3.9e-05 23.9 0.1 0.088 13.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 ORF136331 - 0.00029 21.3 0.3 0.0017 18.8 0.2 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF136331 - 0.00039 20.4 0.1 0.29 11.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 ORF136331 - 0.00041 20.7 1.9 0.021 15.2 1.9 2.5 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF136331 - 0.00084 19.1 0.1 1.7 8.3 0.1 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF136331 - 0.0022 17.4 1.1 0.21 11.0 0.5 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 ORF136331 - 0.003 16.9 0.5 0.007 15.7 0.5 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_25 PF13481.6 ORF136331 - 0.0038 16.8 0.1 0.0074 15.9 0.1 1.4 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 ORF136331 - 0.017 14.4 0.0 0.029 13.6 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF136331 - 0.04 13.4 0.1 0.19 11.2 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_11 PF13086.6 ORF136331 - 0.081 12.7 1.3 0.46 10.2 1.3 2.1 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF136331 - 0.096 13.1 1.5 0.23 11.9 0.9 2.1 2 1 0 2 2 1 0 AAA domain ResIII PF04851.15 ORF136331 - 0.13 12.3 0.7 2.9 7.9 0.7 2.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit CRAL_TRIO PF00650.20 ORF135562 - 1.2e-23 83.5 0.0 1.8e-23 83.0 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF135562 - 4e-07 30.3 0.0 9.1e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF5523 PF17661.1 ORF135562 - 0.04 13.6 1.1 0.061 13.0 1.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5523) PGA2 PF07543.12 ORF135562 - 4.3 7.3 5.5 8.7 6.3 5.5 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 DUF3256 PF11644.8 ORF117534 - 0.032 13.7 0.0 0.074 12.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3256) SspB PF04386.13 ORF117534 - 0.098 12.5 2.6 0.26 11.2 2.6 1.7 1 0 0 1 1 1 0 Stringent starvation protein B Presenilin PF01080.17 ORF117534 - 9.8 4.8 8.2 16 4.1 8.2 1.3 1 0 0 1 1 1 0 Presenilin MFS_2 PF13347.6 ORF105283 - 5.4e-82 275.6 37.5 6.1e-82 275.4 37.5 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 ORF105283 - 3.6e-09 36.0 43.4 3.6e-09 36.0 43.4 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF2101 PF09874.9 ORF105283 - 3.8 7.2 10.1 0.84 9.3 6.1 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2101) Alpha-amylase PF00128.24 ORF100774 - 5e-57 194.0 4.4 1.4e-56 192.5 4.4 1.7 1 1 0 1 1 1 1 Alpha amylase, catalytic domain hDGE_amylase PF14701.6 ORF100774 - 0.00091 18.4 0.0 0.0021 17.2 0.0 1.5 1 0 0 1 1 1 1 Glycogen debranching enzyme, glucanotransferase domain SH3_13 PF18335.1 ORF100774 - 0.028 14.3 0.0 0.18 11.6 0.0 2.2 2 0 0 2 2 2 0 ATP-dependent RecD-like DNA helicase SH3 domain Alpha-amylase PF00128.24 ORF90478 - 4.5e-54 184.3 2.5 9.9e-54 183.1 2.5 1.5 1 1 0 1 1 1 1 Alpha amylase, catalytic domain GHL10 PF02638.15 ORF90478 - 0.0015 17.7 0.1 0.0044 16.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolase-like 10 DUF1971 PF09313.11 ORF90478 - 0.08 13.0 0.0 0.24 11.5 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1971) DUF1966 PF09260.11 ORF90478 - 0.16 12.3 0.2 0.42 10.9 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1966) Peptidase_M20 PF01546.28 ORF84383 - 1.2e-16 61.1 0.0 1.5e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF84383 - 5.7e-10 39.1 0.0 9.5e-10 38.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Ion_trans PF00520.31 ORF83586 - 1.7e-08 34.0 4.7 2.3e-08 33.6 4.7 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans PF00520.31 ORF72405 - 1.7e-08 34.0 4.7 2.3e-08 33.6 4.7 1.2 1 0 0 1 1 1 1 Ion transport protein B56 PF01603.20 ORF6061 - 3.6e-126 421.5 9.9 5.2e-126 421.0 9.9 1.1 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) TFCD_C PF12612.8 ORF6061 - 0.088 12.6 0.6 2.8 7.7 0.1 2.8 2 1 1 3 3 3 0 Tubulin folding cofactor D C terminal Sec7_N PF12783.7 ORF6061 - 0.092 12.6 4.3 6.5 6.6 0.1 2.9 2 1 1 3 3 3 0 Guanine nucleotide exchange factor in Golgi transport N-terminal AAA_33 PF13671.6 ORF60220 - 1.7 8.8 5.5 3.3 7.9 5.5 1.4 1 0 0 1 1 1 0 AAA domain NTP_transf_2 PF01909.23 ORF51991 - 4.7e-07 30.0 0.0 1.2e-06 28.6 0.0 1.8 1 0 0 1 1 1 1 Nucleotidyltransferase domain PAP_assoc PF03828.19 ORF51991 - 2.8e-06 27.4 1.4 6.4e-06 26.3 1.4 1.6 1 0 0 1 1 1 1 Cid1 family poly A polymerase Polbeta PF18765.1 ORF51991 - 0.00096 19.2 0.0 0.003 17.6 0.0 1.9 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase Pkinase PF00069.25 ORF4745 - 1.3e-71 241.1 0.3 2e-71 240.4 0.3 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4745 - 5.9e-47 160.1 0.1 9.1e-47 159.5 0.1 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF4745 - 7.5e-10 38.6 0.1 1.4e-08 34.4 0.0 2.1 1 1 1 2 2 2 1 Kinase-like zf-MYND PF01753.18 ORF4745 - 3.7e-05 23.7 9.9 3.7e-05 23.7 9.9 1.9 2 0 0 2 2 2 1 MYND finger Pkinase_fungal PF17667.1 ORF4745 - 4.3e-05 22.5 2.8 0.00021 20.2 0.0 2.5 3 0 0 3 3 3 1 Fungal protein kinase Ecl1 PF12855.7 ORF4745 - 0.041 15.0 4.6 0.11 13.7 0.3 2.3 2 0 0 2 2 2 0 ECL1/2/3 zinc binding proteins Atg8 PF02991.16 ORF4745 - 0.059 13.6 0.2 0.61 10.3 0.0 2.7 3 0 0 3 3 3 0 Autophagy protein Atg8 ubiquitin like APH PF01636.23 ORF4745 - 0.1 12.5 0.0 0.26 11.2 0.0 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family FYVE PF01363.21 ORF37400 - 5.6e-17 61.6 14.4 1e-16 60.8 14.4 1.5 1 0 0 1 1 1 1 FYVE zinc finger Fer2_3 PF13085.6 ORF37400 - 0.91 9.6 5.4 4.7 7.3 4.1 2.5 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Zf_RING PF16744.5 ORF37400 - 1.6 8.9 9.7 4 7.6 9.7 1.7 1 0 0 1 1 1 0 KIAA1045 RING finger FYVE_2 PF02318.16 ORF37400 - 5.4 7.3 19.1 0.035 14.3 9.8 2.1 3 0 0 3 3 3 0 FYVE-type zinc finger DUF1664 PF07889.12 ORF37400 - 5.9 6.9 9.4 2.3 8.3 1.6 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Thioredoxin_8 PF13905.6 ORF25599 - 2.3e-36 124.0 0.5 2.2e-26 92.0 0.0 3.3 4 0 0 4 4 4 2 Thioredoxin-like Redoxin PF08534.10 ORF25599 - 1.2e-09 38.1 0.4 4.4e-08 33.0 0.0 2.9 3 0 0 3 3 3 1 Redoxin Thioredoxin_2 PF13098.6 ORF25599 - 1.3e-09 38.5 0.3 1.3e-06 28.8 0.0 3.1 3 0 0 3 3 3 2 Thioredoxin-like domain Thioredoxin PF00085.20 ORF25599 - 1.8e-08 34.3 3.2 0.00014 21.8 0.0 4.6 4 1 1 5 5 5 1 Thioredoxin AhpC-TSA PF00578.21 ORF25599 - 3.4e-08 33.4 0.0 4.3e-07 29.9 0.0 2.5 2 0 0 2 2 2 1 AhpC/TSA family Thioredoxin_7 PF13899.6 ORF25599 - 0.008 16.3 0.1 0.67 10.2 0.0 3.2 2 1 0 2 2 2 1 Thioredoxin-like RLL PF10036.9 ORF25599 - 0.02 14.8 0.0 1.4 8.7 0.0 2.6 2 1 0 2 2 2 0 RNA transcription, translation and transport factor protein HyaE PF07449.11 ORF25599 - 0.083 12.9 0.2 9.9 6.2 0.0 3.3 3 1 0 3 3 3 0 Hydrogenase-1 expression protein HyaE Thioredoxin_6 PF13848.6 ORF25599 - 0.11 12.4 0.0 1.1 9.2 0.0 2.5 3 0 0 3 3 3 0 Thioredoxin-like domain SMC_N PF02463.19 ORF23931 - 1.3e-05 24.8 0.4 1.5e-05 24.5 0.4 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF23931 - 1.5e-05 25.1 0.1 0.00014 22.0 0.0 2.5 1 1 1 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 ORF23931 - 3.4e-05 23.8 0.1 0.00017 21.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 ORF23931 - 0.068 12.9 1.2 0.84 9.3 1.2 2.4 1 1 1 2 2 2 0 AAA ATPase domain DUF3584 PF12128.8 ORF23931 - 0.16 9.4 38.8 0.65 7.4 38.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) DUF4392 PF14336.6 ORF23931 - 0.17 11.3 2.2 0.34 10.3 0.0 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4392) Fib_alpha PF08702.10 ORF23931 - 1.1 9.4 20.3 0.33 11.2 6.0 2.9 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family GAS PF13851.6 ORF23931 - 1.2 8.4 35.1 2.2 7.6 8.9 3.5 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding MAD PF05557.13 ORF23931 - 1.3 7.3 37.2 1 7.6 34.3 1.8 1 1 1 2 2 2 0 Mitotic checkpoint protein NPV_P10 PF05531.12 ORF23931 - 3.4 8.2 9.6 15 6.1 0.3 4.2 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF3138 PF11336.8 ORF23931 - 6 5.4 5.2 12 4.4 5.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) ABC_tran PF00005.27 ORF23931 - 6.7 7.2 7.3 2.5e+02 2.1 7.3 3.1 1 1 0 1 1 1 0 ABC transporter Csm1_N PF18504.1 ORF23931 - 8.7 6.8 31.4 0.45 10.9 5.1 5.7 2 1 3 5 5 5 0 Csm1 N-terminal domain FUSC PF04632.12 ORF23489 - 0.12 10.9 5.9 0.26 9.8 5.9 1.5 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF4795 PF16043.5 ORF23489 - 0.7 9.5 9.3 0.19 11.3 4.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) Spc7 PF08317.11 ORF23489 - 1.7 7.4 14.5 0.16 10.8 7.5 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein Ion_trans PF00520.31 ORF142980 - 3.2e-11 43.0 9.6 1.5e-10 40.7 9.6 1.9 2 1 0 2 2 2 1 Ion transport protein EF-hand_6 PF13405.6 ORF142980 - 0.00036 20.2 0.3 0.08 12.9 0.0 2.8 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF142980 - 0.0018 17.7 0.6 0.07 12.7 0.1 2.7 2 0 0 2 2 2 1 EF hand Phage_holin_3_5 PF16085.5 ORF142980 - 0.034 14.3 0.3 0.1 12.8 0.3 1.8 1 0 0 1 1 1 0 Bacteriophage holin Hol, superfamily III EF-hand_5 PF13202.6 ORF142980 - 0.053 13.0 1.7 0.34 10.5 0.2 2.8 3 0 0 3 3 3 0 EF hand EF-hand_7 PF13499.6 ORF142980 - 0.08 13.4 0.2 0.19 12.2 0.2 1.6 1 0 0 1 1 1 0 EF-hand domain pair Semialdhyde_dhC PF02774.18 ORF138057 - 4.2e-45 154.1 0.0 6.4e-45 153.5 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 ORF138057 - 1.1e-22 80.7 0.0 2.5e-22 79.6 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_C PF02800.20 ORF138057 - 0.00034 20.2 0.1 0.0015 18.2 0.1 2.0 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TraG_N PF07916.11 ORF13432 - 0.39 9.5 4.7 0.53 9.1 4.7 1.1 1 0 0 1 1 1 0 TraG-like protein, N-terminal region Asp PF00026.23 ORF121482 - 4.1e-23 82.3 0.7 6.1e-23 81.7 0.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF121482 - 0.0077 16.0 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Peptidase_M20 PF01546.28 ORF117804 - 2.2e-18 66.7 0.0 3.6e-18 66.0 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF117804 - 8.3e-12 45.0 0.0 1.5e-11 44.2 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain AAA_33 PF13671.6 ORF115802 - 1.7 8.8 5.5 3.3 7.9 5.5 1.4 1 0 0 1 1 1 0 AAA domain Peptidase_M20 PF01546.28 ORF111706 - 1.2e-16 61.1 0.0 1.5e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF111706 - 5.7e-10 39.1 0.0 9.5e-10 38.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Gaa1 PF04114.14 ORF96943 - 5.3e-16 58.7 10.2 2e-12 46.9 1.1 2.5 2 1 0 2 2 2 2 Gaa1-like, GPI transamidase component Ion_trans PF00520.31 ORF96117 - 5.4e-19 68.4 19.7 8.2e-19 67.8 19.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF96117 - 4.2e-11 41.6 0.8 2.6e-06 26.6 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF96117 - 2.9e-10 39.2 0.5 1e-05 25.0 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF96117 - 1.5e-09 38.1 2.8 1e-05 25.9 0.2 2.2 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF96117 - 8.4e-09 35.1 0.4 9.4e-05 22.2 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF96117 - 2.1e-07 30.1 1.0 2.2e-05 23.7 0.2 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF96117 - 0.064 13.2 0.2 0.19 11.7 0.1 1.9 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Pyridoxal_deC PF00282.19 ORF87257 - 1.2e-19 70.3 0.0 1.7e-19 69.8 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain DUF4157 PF13699.6 ORF8508 - 0.021 15.1 0.3 18 5.6 0.0 4.1 5 0 0 5 5 5 0 Domain of unknown function (DUF4157) PAN_4 PF14295.6 ORF8508 - 0.3 11.0 8.7 0.39 10.7 0.8 2.5 1 1 1 2 2 2 0 PAN domain DUF3439 PF11921.8 ORF8508 - 0.46 10.5 10.4 0.3 11.0 8.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) Ion_trans PF00520.31 ORF81130 - 5.4e-19 68.4 19.7 8.2e-19 67.8 19.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF81130 - 4.2e-11 41.6 0.8 2.6e-06 26.6 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF81130 - 2.9e-10 39.2 0.5 1e-05 25.0 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF81130 - 1.5e-09 38.1 2.8 1e-05 25.9 0.2 2.2 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF81130 - 8.4e-09 35.1 0.4 9.4e-05 22.2 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF81130 - 2.1e-07 30.1 1.0 2.2e-05 23.7 0.2 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF81130 - 0.064 13.2 0.2 0.19 11.7 0.1 1.9 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand NCOA_u2 PF16665.5 ORF70194 - 6 7.2 10.4 15 5.9 1.7 2.6 2 0 0 2 2 2 0 Unstructured region on nuclear receptor coactivator protein MFS_1 PF07690.16 ORF50538 - 3.5e-26 92.0 23.8 5.2e-26 91.4 23.8 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF50538 - 0.0033 16.3 7.6 0.0033 16.3 7.6 2.6 2 1 0 2 2 2 1 Sugar (and other) transporter TACC_C PF05010.14 ORF41655 - 0.16 11.7 6.2 0.26 11.0 6.2 1.2 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal S-AdoMet_synt_C PF02773.16 ORF3817 - 1.3e-58 196.8 0.0 2.6e-58 195.9 0.0 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 ORF3817 - 3.1e-40 137.1 0.2 1.4e-39 135.1 0.0 2.0 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 ORF3817 - 7.2e-39 132.5 1.6 4.4e-38 129.9 0.4 2.2 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 ORF3817 - 0.067 12.0 0.0 0.14 11.0 0.0 1.4 1 0 0 1 1 1 0 S-adenosylmethionine synthetase (AdoMet synthetase) Ion_trans PF00520.31 ORF152247 - 5.4e-19 68.4 19.7 8.2e-19 67.8 19.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF152247 - 4.2e-11 41.6 0.8 2.6e-06 26.6 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF152247 - 2.9e-10 39.2 0.5 1e-05 25.0 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF152247 - 1.5e-09 38.1 2.8 1e-05 25.9 0.2 2.2 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF152247 - 8.4e-09 35.1 0.4 9.4e-05 22.2 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF152247 - 2.1e-07 30.1 1.0 2.2e-05 23.7 0.2 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF152247 - 0.064 13.2 0.2 0.19 11.7 0.1 1.9 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand DUF16 PF01519.16 ORF140603 - 1.5 9.3 16.0 0.37 11.3 0.2 3.9 3 1 0 3 3 3 0 Protein of unknown function DUF16 Cep57_CLD_2 PF14197.6 ORF140603 - 2.1 8.5 10.1 8.3 6.6 0.0 3.9 4 0 0 4 4 4 0 Centrosome localisation domain of PPC89 Enolase_C PF00113.22 ORF138071 - 6.4e-140 465.5 0.0 8.2e-140 465.2 0.0 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 ORF138071 - 2.7e-57 192.5 0.1 5.5e-57 191.6 0.1 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 ORF138071 - 1.4e-06 28.0 0.0 2.2e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 ORF138071 - 0.0009 18.5 0.1 0.0016 17.6 0.1 1.3 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus Ribosomal_L12_N PF16320.5 ORF138071 - 0.045 13.5 3.2 0.91 9.3 0.0 3.3 3 0 0 3 3 3 0 Ribosomal protein L7/L12 dimerisation domain WD40 PF00400.32 ORF136129 - 1.2e-24 86.1 21.6 0.00019 22.1 0.1 6.4 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF136129 - 6.7e-06 26.3 4.5 0.013 15.8 0.0 4.6 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF136129 - 0.0046 16.9 1.6 0.2 11.6 0.1 2.8 3 0 0 3 3 3 1 WD40-like Beta Propeller Repeat Ricin_B_lectin PF00652.22 ORF136129 - 0.074 13.3 4.1 0.059 13.6 1.6 2.2 2 1 0 2 2 2 0 Ricin-type beta-trefoil lectin domain IDO PF01231.18 ORF13610 - 1.5e-11 43.7 0.0 7.1e-09 35.0 0.0 2.2 1 1 0 1 1 1 1 Indoleamine 2,3-dioxygenase DUF1148 PF06618.11 ORF13610 - 0.047 13.9 1.2 7.2 6.8 0.0 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF1148) AAA PF00004.29 ORF12241 - 3.9e-18 66.1 0.0 7.4e-18 65.2 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 ORF12241 - 5.4e-07 29.2 0.4 0.00035 20.0 0.1 2.8 2 1 0 3 3 3 2 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 ORF12241 - 1.2e-05 25.1 0.1 9e-05 22.3 0.1 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 ORF12241 - 0.00016 20.8 0.6 0.0007 18.7 0.1 2.0 2 0 0 2 2 2 1 MCM P-loop domain AAA_22 PF13401.6 ORF12241 - 0.00025 21.3 0.2 0.012 15.8 0.0 2.9 2 1 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 ORF12241 - 0.00044 20.0 0.1 0.0042 16.8 0.1 2.3 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.14 ORF12241 - 0.0006 20.0 0.1 0.0011 19.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) NACHT PF05729.12 ORF12241 - 0.0007 19.5 0.1 0.016 15.1 0.1 2.4 1 1 0 1 1 1 1 NACHT domain AAA_30 PF13604.6 ORF12241 - 0.00079 19.2 0.9 0.0018 18.0 0.1 2.0 2 1 1 3 3 3 1 AAA domain AAA_5 PF07728.14 ORF12241 - 0.001 19.0 0.0 0.0029 17.6 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF12241 - 0.0042 17.5 0.3 0.013 15.8 0.1 1.9 2 1 0 2 2 2 1 AAA ATPase domain DUF2075 PF09848.9 ORF12241 - 0.014 14.7 0.1 0.23 10.6 0.1 2.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RNA_helicase PF00910.22 ORF12241 - 0.022 15.2 0.0 0.078 13.4 0.0 1.9 1 1 0 1 1 1 0 RNA helicase ResIII PF04851.15 ORF12241 - 0.029 14.4 0.2 1.8 8.6 0.1 2.3 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit HR1 PF02185.16 ORF12241 - 0.043 13.9 1.5 0.1 12.7 0.2 2.2 2 0 0 2 2 2 0 Hr1 repeat AAA_11 PF13086.6 ORF12241 - 0.049 13.4 0.2 0.12 12.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 ORF12241 - 0.054 14.0 0.0 0.14 12.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 ORF12241 - 0.079 12.1 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Sigma54_activ_2 PF14532.6 ORF12241 - 0.091 12.9 0.0 0.3 11.2 0.0 1.8 1 0 0 1 1 1 0 Sigma-54 interaction domain ABC_tran PF00005.27 ORF12241 - 0.1 13.1 0.0 0.21 12.1 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_3 PF07726.11 ORF12241 - 0.1 12.4 0.0 0.28 11.0 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 ORF12241 - 0.16 12.0 0.1 0.36 10.8 0.1 1.6 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Glyco_hydro_1 PF00232.18 ORF105737 - 7.1e-156 519.1 0.2 8e-156 519.0 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Cellulase PF00150.18 ORF105737 - 0.00043 19.8 0.0 0.0008 18.9 0.0 1.4 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) DUF4038 PF13204.6 ORF105737 - 0.0011 18.7 0.1 0.0015 18.2 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4038) Albumin_I_a PF16720.5 ORF105737 - 0.0052 16.7 0.0 0.017 15.0 0.0 1.8 1 0 0 1 1 1 1 Albumin I chain a UDPG_MGDP_dh_N PF03721.14 ORF99669 - 2.9e-52 177.0 0.1 7.4e-52 175.6 0.1 1.7 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 ORF99669 - 3.2e-33 114.3 0.1 3.8e-32 110.8 0.1 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 ORF99669 - 6.2e-32 109.7 0.0 1.3e-31 108.6 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 ORF99669 - 0.0019 18.4 0.1 0.086 13.0 0.1 2.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Ycf54 PF10674.9 ORF99669 - 0.12 12.6 0.0 2.2 8.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2488) Pkinase PF00069.25 ORF94644 - 8.1e-60 202.4 0.4 3.2e-42 144.7 0.8 3.1 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94644 - 5.7e-31 107.7 0.1 1.9e-26 92.9 0.4 2.3 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF94644 - 0.00024 20.2 0.3 0.00043 19.4 0.3 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF94644 - 0.12 11.7 0.1 0.12 11.7 0.1 1.7 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF94644 - 0.15 12.0 0.0 0.41 10.5 0.0 1.7 2 0 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF94644 - 0.51 9.0 4.6 0.19 10.5 0.1 2.0 1 1 0 2 2 2 0 Fungal protein kinase YqfQ PF14181.6 ORF94644 - 2.8 8.1 5.0 4.6 7.4 5.0 1.3 1 0 0 1 1 1 0 YqfQ-like protein Pkinase PF00069.25 ORF8230 - 8.1e-60 202.4 0.4 3.2e-42 144.7 0.8 3.1 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF8230 - 5.7e-31 107.7 0.1 1.9e-26 92.9 0.4 2.3 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF8230 - 0.00024 20.2 0.3 0.00043 19.4 0.3 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF8230 - 0.12 11.7 0.1 0.12 11.7 0.1 1.7 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF8230 - 0.15 12.0 0.0 0.41 10.5 0.0 1.7 2 0 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF8230 - 0.51 9.0 4.6 0.19 10.5 0.1 2.0 1 1 0 2 2 2 0 Fungal protein kinase YqfQ PF14181.6 ORF8230 - 2.8 8.1 5.0 4.6 7.4 5.0 1.3 1 0 0 1 1 1 0 YqfQ-like protein CRAL_TRIO PF00650.20 ORF8048 - 1.2e-23 83.6 0.0 1.8e-23 83.0 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF8048 - 3.9e-07 30.3 0.0 9e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF5523 PF17661.1 ORF8048 - 0.083 12.6 2.0 0.13 12.0 2.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5523) PGA2 PF07543.12 ORF8048 - 4.2 7.3 5.5 8.6 6.3 5.5 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 Asp PF00026.23 ORF77061 - 4.8e-32 111.6 1.1 6.8e-32 111.1 1.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF77061 - 7.4e-05 22.6 0.0 0.00073 19.4 0.0 2.2 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal CS PF04969.16 ORF76066 - 0.00064 20.7 0.1 0.69 11.0 0.0 3.5 3 0 0 3 3 3 1 CS domain LPMO_10 PF03067.15 ORF70581 - 0.0001 23.1 2.0 0.00035 21.3 0.1 2.7 2 1 0 2 2 2 1 Lytic polysaccharide mono-oxygenase, cellulose-degrading Zip PF02535.22 ORF70581 - 0.0017 17.6 3.3 0.0024 17.1 3.3 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter SpoIIIAH PF12685.7 ORF70581 - 0.0039 17.1 0.3 0.0067 16.3 0.3 1.3 1 0 0 1 1 1 1 SpoIIIAH-like protein EGF_2 PF07974.13 ORF70581 - 0.0081 16.5 13.4 0.021 15.2 13.4 1.7 1 0 0 1 1 1 1 EGF-like domain DUF4064 PF13273.6 ORF70581 - 0.01 16.1 0.0 0.016 15.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) EGF_Tenascin PF18720.1 ORF70581 - 0.016 15.2 8.8 0.031 14.3 8.8 1.5 1 0 0 1 1 1 0 Tenascin EGF domain TSGP1 PF07771.11 ORF70581 - 0.035 14.3 1.5 0.035 14.3 1.5 2.8 3 0 0 3 3 3 0 Tick salivary peptide group 1 OATP PF03137.20 ORF70581 - 0.041 12.2 0.0 0.061 11.6 0.0 1.2 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family EGF PF00008.27 ORF70581 - 5.6 7.4 12.7 0.23 11.8 5.9 2.3 2 1 0 2 2 2 0 EGF-like domain Pkinase PF00069.25 ORF55984 - 6.3e-67 225.7 0.2 1.1e-66 224.9 0.2 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF55984 - 4.2e-53 180.3 0.0 7.5e-53 179.4 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF55984 - 1.4e-08 34.4 0.2 3.5e-07 29.8 0.0 2.5 3 0 0 3 3 3 1 Kinase-like Pkinase_fungal PF17667.1 ORF55984 - 0.0015 17.4 0.6 0.0021 16.9 0.1 1.5 2 0 0 2 2 2 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF55984 - 0.0041 16.1 0.7 0.0075 15.2 0.3 1.6 2 0 0 2 2 2 1 Haspin like kinase domain Kdo PF06293.14 ORF55984 - 0.017 14.5 0.2 0.028 13.8 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 ORF45412 - 3.7e-46 157.6 0.1 5.9e-46 157.0 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45412 - 1.2e-26 93.6 0.0 1.7e-26 93.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF45412 - 1.1e-05 24.9 0.0 2.2e-05 24.0 0.0 1.6 1 0 0 1 1 1 1 Kinase-like S-AdoMet_synt_N PF00438.20 ORF45412 - 0.12 13.0 0.2 0.36 11.6 0.2 1.8 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, N-terminal domain FTA2 PF13095.6 ORF45412 - 2.7 7.5 6.5 3 7.4 0.0 3.3 4 0 0 4 4 4 0 Kinetochore Sim4 complex subunit FTA2 Pkinase PF00069.25 ORF41985 - 3.1e-69 233.3 0.2 5.2e-69 232.5 0.2 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41985 - 2.8e-36 125.1 0.0 5.2e-36 124.2 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF41985 - 2e-06 27.3 0.0 9.4e-06 25.1 0.0 2.0 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 ORF41985 - 0.0015 17.9 0.1 0.0037 16.6 0.0 1.6 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF41985 - 0.017 15.1 0.0 0.031 14.2 0.0 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF41985 - 0.052 12.3 0.1 0.052 12.3 0.1 1.7 2 0 0 2 2 2 0 Fungal protein kinase RIO1 PF01163.22 ORF41985 - 0.052 13.1 0.2 0.052 13.1 0.2 2.3 2 1 1 3 3 3 0 RIO1 family Imm7 PF15585.6 ORF41985 - 0.11 12.8 0.3 2 8.7 0.0 2.8 3 0 0 3 3 3 0 Immunity protein 7 Peptidase_S28 PF05577.12 ORF41141 - 6.3e-82 275.7 4.9 1.8e-81 274.2 4.9 1.6 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF41141 - 0.1 12.1 0.0 0.29 10.6 0.0 1.7 2 0 0 2 2 2 0 Prolyl oligopeptidase family Hydrolase PF00702.26 ORF37549 - 1.5e-49 169.1 6.5 2.3e-49 168.6 6.5 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 ORF37549 - 1.8e-34 118.9 1.8 1.8e-34 118.9 1.8 2.0 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF37549 - 1.4e-09 38.1 1.1 2.4e-06 27.5 0.8 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF37549 - 2.3e-05 24.9 0.2 0.00021 21.8 0.1 2.5 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase CstA_5TM PF13722.6 ORF37549 - 0.0059 17.0 5.7 0.023 15.0 0.4 2.3 2 0 0 2 2 2 1 5TM C-terminal transporter carbon starvation CstA HAD_2 PF13419.6 ORF37549 - 0.0087 16.2 0.1 0.051 13.7 0.1 2.0 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase DUF983 PF06170.12 ORF37549 - 1 9.8 5.6 2.7 8.4 5.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF983) Asp PF00026.23 ORF37242 - 4.8e-32 111.6 1.1 6.8e-32 111.1 1.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF37242 - 7.4e-05 22.6 0.0 0.00073 19.4 0.0 2.2 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Peptidase_S28 PF05577.12 ORF34112 - 6.3e-82 275.7 4.9 1.8e-81 274.2 4.9 1.6 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF34112 - 0.1 12.1 0.0 0.29 10.6 0.0 1.7 2 0 0 2 2 2 0 Prolyl oligopeptidase family FMO-like PF00743.19 ORF33452 - 9.6e-32 110.1 5.0 7.1e-18 64.3 1.8 2.2 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF33452 - 1.9e-07 30.7 0.2 2.3e-06 27.1 0.2 2.3 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF33452 - 2.6e-07 30.1 0.0 2.3e-05 23.7 0.0 3.0 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 ORF33452 - 4e-06 26.3 0.0 0.0034 16.7 0.0 2.5 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF33452 - 0.0079 16.4 0.0 0.019 15.2 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 ORF33452 - 0.013 15.5 0.1 1.4 8.9 0.0 3.0 2 1 0 2 2 2 0 FAD-NAD(P)-binding DAO PF01266.24 ORF33452 - 0.14 11.7 0.1 19 4.7 0.3 2.9 2 1 0 3 3 3 0 FAD dependent oxidoreductase DEAD PF00270.29 ORF30603 - 2.8e-44 151.0 0.0 1.1e-43 149.1 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF30603 - 4.2e-30 104.3 0.0 7.7e-29 100.3 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF30603 - 0.0031 17.5 0.0 0.0084 16.1 0.0 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DUF4403 PF14356.6 ORF18275 - 0.0064 15.2 0.0 0.01 14.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4403) JHBP PF06585.11 ORF18275 - 0.084 12.0 1.0 0.15 11.2 1.0 1.4 1 0 0 1 1 1 0 Haemolymph juvenile hormone binding protein (JHBP) LPMO_10 PF03067.15 ORF14853 - 0.0001 23.1 2.0 0.00035 21.3 0.1 2.7 2 1 0 2 2 2 1 Lytic polysaccharide mono-oxygenase, cellulose-degrading Zip PF02535.22 ORF14853 - 0.0017 17.6 3.3 0.0024 17.1 3.3 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter SpoIIIAH PF12685.7 ORF14853 - 0.0039 17.1 0.3 0.0067 16.3 0.3 1.3 1 0 0 1 1 1 1 SpoIIIAH-like protein EGF_2 PF07974.13 ORF14853 - 0.0081 16.5 13.4 0.021 15.2 13.4 1.7 1 0 0 1 1 1 1 EGF-like domain DUF4064 PF13273.6 ORF14853 - 0.01 16.1 0.0 0.016 15.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) EGF_Tenascin PF18720.1 ORF14853 - 0.016 15.2 8.8 0.031 14.3 8.8 1.5 1 0 0 1 1 1 0 Tenascin EGF domain TSGP1 PF07771.11 ORF14853 - 0.035 14.3 1.5 0.035 14.3 1.5 2.8 3 0 0 3 3 3 0 Tick salivary peptide group 1 OATP PF03137.20 ORF14853 - 0.041 12.2 0.0 0.061 11.6 0.0 1.2 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family EGF PF00008.27 ORF14853 - 5.6 7.4 12.7 0.23 11.8 5.9 2.3 2 1 0 2 2 2 0 EGF-like domain UDPG_MGDP_dh_N PF03721.14 ORF145835 - 2.9e-52 177.0 0.1 7.4e-52 175.6 0.1 1.7 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 ORF145835 - 3.2e-33 114.3 0.1 3.8e-32 110.8 0.1 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 ORF145835 - 6.2e-32 109.7 0.0 1.3e-31 108.6 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 ORF145835 - 0.0019 18.4 0.1 0.086 13.0 0.1 2.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Ycf54 PF10674.9 ORF145835 - 0.12 12.6 0.0 2.2 8.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2488) Pkinase PF00069.25 ORF141677 - 8.1e-60 202.4 0.4 3.2e-42 144.7 0.8 3.1 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF141677 - 5.7e-31 107.7 0.1 1.9e-26 92.9 0.4 2.3 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF141677 - 0.00024 20.2 0.3 0.00043 19.4 0.3 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF141677 - 0.12 11.7 0.1 0.12 11.7 0.1 1.7 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF141677 - 0.15 12.0 0.0 0.41 10.5 0.0 1.7 2 0 0 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF141677 - 0.51 9.0 4.6 0.19 10.5 0.1 2.0 1 1 0 2 2 2 0 Fungal protein kinase YqfQ PF14181.6 ORF141677 - 2.8 8.1 5.0 4.6 7.4 5.0 1.3 1 0 0 1 1 1 0 YqfQ-like protein CS PF04969.16 ORF139182 - 0.00064 20.7 0.1 0.69 11.0 0.0 3.5 3 0 0 3 3 3 1 CS domain DUF2420 PF10336.9 ORF131696 - 0.0011 18.9 0.8 0.0041 17.1 0.4 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2420) LPMO_10 PF03067.15 ORF130521 - 0.0001 23.1 2.0 0.00035 21.3 0.1 2.7 2 1 0 2 2 2 1 Lytic polysaccharide mono-oxygenase, cellulose-degrading Zip PF02535.22 ORF130521 - 0.0017 17.6 3.3 0.0024 17.1 3.3 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter SpoIIIAH PF12685.7 ORF130521 - 0.0039 17.1 0.3 0.0067 16.3 0.3 1.3 1 0 0 1 1 1 1 SpoIIIAH-like protein EGF_2 PF07974.13 ORF130521 - 0.0081 16.5 13.4 0.021 15.2 13.4 1.7 1 0 0 1 1 1 1 EGF-like domain DUF4064 PF13273.6 ORF130521 - 0.01 16.1 0.0 0.016 15.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) EGF_Tenascin PF18720.1 ORF130521 - 0.016 15.2 8.8 0.031 14.3 8.8 1.5 1 0 0 1 1 1 0 Tenascin EGF domain TSGP1 PF07771.11 ORF130521 - 0.035 14.3 1.5 0.035 14.3 1.5 2.8 3 0 0 3 3 3 0 Tick salivary peptide group 1 OATP PF03137.20 ORF130521 - 0.041 12.2 0.0 0.061 11.6 0.0 1.2 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family EGF PF00008.27 ORF130521 - 5.6 7.4 12.7 0.23 11.8 5.9 2.3 2 1 0 2 2 2 0 EGF-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks25.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks25.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks25.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks25.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:15:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DNA_ligase_A_M PF01068.21 NODE_56248_length_304_cov_1.490706_g48311_i0reverse_frame_1 - 0.008 15.8 0.2 0.011 15.3 0.2 1.3 1 1 0 1 1 1 1 ATP dependent DNA ligase domain BLUF PF04940.12 NODE_56246_length_304_cov_1.568773_g48309_i0forward_frame_1 - 0.066 13.4 0.1 0.099 12.8 0.1 1.3 1 0 0 1 1 1 0 Sensors of blue-light using FAD TAN PF11640.8 NODE_56238_length_304_cov_1.721190_g48301_i0reverse_frame_1 - 0.031 14.4 0.2 0.035 14.2 0.2 1.1 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair Cas6b_C PF17262.2 NODE_56230_length_304_cov_1.899628_g48293_i0reverse_frame_1 - 0.1 12.7 0.4 7.7 6.7 0.0 2.0 1 1 1 2 2 2 0 Cas6b C-terminal domain Noc2 PF03715.13 NODE_56230_length_304_cov_1.899628_g48293_i0forward_frame_1 - 0.00063 19.1 0.1 0.00082 18.7 0.1 1.1 1 0 0 1 1 1 1 Noc2p family DUF2574 PF10836.8 NODE_56228_length_304_cov_2.044610_g48291_i0forward_frame_1 - 0.048 13.5 0.3 0.08 12.8 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) NIF PF03031.18 NODE_56219_length_304_cov_2.323420_g48282_i0forward_frame_1 - 5.8e-07 29.4 0.0 9e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase UPF0139 PF03669.13 NODE_56218_length_304_cov_2.360595_g48281_i0reverse_frame_1 - 0.13 12.1 2.9 0.23 11.3 2.9 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0139) Lustrin_cystein PF14625.6 NODE_56216_length_304_cov_2.371747_g48279_i0forward_frame_1 - 0.027 14.8 12.4 0.061 13.7 6.3 2.8 3 1 0 3 3 3 0 Lustrin, cysteine-rich repeated domain CDC37_C PF08564.10 NODE_56215_length_304_cov_2.386617_g48278_i0reverse_frame_1 - 0.00077 19.5 0.2 0.0026 17.8 0.1 1.8 2 0 0 2 2 2 1 Cdc37 C terminal domain Dpy-30 PF05186.13 NODE_56214_length_304_cov_2.397770_g48277_i0forward_frame_1 - 1.6e-06 27.7 0.1 2.1e-06 27.3 0.1 1.2 1 0 0 1 1 1 1 Dpy-30 motif Pox_VP8_L4R PF04498.12 NODE_56214_length_304_cov_2.397770_g48277_i0forward_frame_1 - 0.041 13.5 0.2 0.045 13.4 0.2 1.1 1 0 0 1 1 1 0 Poxvirus nucleic acid binding protein VP8/L4R Ac76 PF05814.11 NODE_56214_length_304_cov_2.397770_g48277_i0forward_frame_1 - 7.3 6.7 6.1 5.3 7.1 0.7 2.1 1 1 1 2 2 2 0 Orf76 (Ac76) Ribosomal_L27_C PF18471.1 NODE_56213_length_304_cov_2.416357_g48276_i0reverse_frame_1 - 0.0053 16.2 0.0 0.0066 15.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal L27 protein C-terminal domain OmpW PF03922.14 NODE_56210_length_304_cov_2.646840_g48273_i0reverse_frame_1 - 3.1e-16 59.8 0.0 3.9e-16 59.5 0.0 1.1 1 0 0 1 1 1 1 OmpW family TraA PF05513.11 NODE_56210_length_304_cov_2.646840_g48273_i0reverse_frame_1 - 0.062 13.6 0.1 0.072 13.4 0.1 1.2 1 0 0 1 1 1 0 TraA DUF2802 PF10975.8 NODE_56206_length_304_cov_2.765799_g48269_i0reverse_frame_1 - 0.044 13.9 0.0 0.065 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2802) Zn_clus PF00172.18 NODE_56204_length_304_cov_2.907063_g48267_i0forward_frame_1 - 4 7.6 17.0 13 6.0 0.3 2.7 1 1 1 2 2 2 0 Fungal Zn(2)-Cys(6) binuclear cluster domain Ac76 PF05814.11 NODE_56203_length_304_cov_2.996283_g48266_i0reverse_frame_1 - 0.01 15.8 0.1 0.015 15.3 0.1 1.3 1 0 0 1 1 1 0 Orf76 (Ac76) Consortin_C PF15281.6 NODE_56203_length_304_cov_2.996283_g48266_i0reverse_frame_1 - 0.039 13.9 0.8 0.057 13.4 0.7 1.4 1 1 0 1 1 1 0 Consortin C-terminus MdoG PF04349.12 NODE_56201_length_304_cov_3.230483_g48264_i0forward_frame_1 - 1.9e-44 152.4 0.0 2e-44 152.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic glucan biosynthesis protein, MdoG TNV_CP PF03898.13 NODE_56201_length_304_cov_3.230483_g48264_i0forward_frame_1 - 0.071 12.4 0.0 0.074 12.3 0.0 1.1 1 0 0 1 1 1 0 Satellite tobacco necrosis virus coat protein RasGEF_N PF00618.20 NODE_56197_length_304_cov_3.475836_g48260_i0forward_frame_1 - 0.057 13.7 0.6 0.073 13.3 0.6 1.3 1 1 0 1 1 1 0 RasGEF N-terminal motif MFS_1 PF07690.16 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 1.6e-09 37.2 0.4 1.9e-09 36.9 0.4 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 0.00065 18.7 0.2 0.00078 18.4 0.2 1.1 1 0 0 1 1 1 1 MFS_1 like family FPN1 PF06963.12 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 0.00084 18.0 0.7 0.00086 18.0 0.7 1.1 1 0 0 1 1 1 1 Ferroportin1 (FPN1) Sugar_tr PF00083.24 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 0.054 12.4 4.3 0.12 11.2 4.3 1.6 1 1 0 1 1 1 0 Sugar (and other) transporter DUF21 PF01595.20 NODE_56194_length_304_cov_4.089219_g48257_i0reverse_frame_1 - 0.073 12.8 0.0 0.096 12.4 0.0 1.3 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain Chloroplast_duf PF14476.6 NODE_56190_length_304_cov_5.364312_g48253_i0forward_frame_1 - 0.039 12.9 0.0 0.045 12.7 0.0 1.0 1 0 0 1 1 1 0 Petal formation-expressed PDR_assoc PF08370.11 NODE_56188_length_304_cov_10.297398_g48251_i0reverse_frame_1 - 0.38 10.5 4.1 0.69 9.7 4.1 1.4 1 0 0 1 1 1 0 Plant PDR ABC transporter associated Lamprin PF06403.11 NODE_56186_length_304_cov_34.104089_g48249_i0forward_frame_1 - 1.4 8.9 8.3 9.6 6.2 3.7 2.1 2 0 0 2 2 2 0 Lamprin Ribosomal_L41 PF05162.13 NODE_56183_length_304_cov_43.884758_g48246_i0reverse_frame_1 - 3.3e-06 27.0 25.3 3.3e-06 27.0 25.3 2.8 4 0 0 4 4 4 1 Ribosomal protein L41 MSA-2c PF12238.8 NODE_56183_length_304_cov_43.884758_g48246_i0forward_frame_1 - 0.26 11.3 0.9 0.33 10.9 0.9 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF3786 PF12654.7 NODE_56181_length_304_cov_49.728625_g48244_i0forward_frame_1 - 0.099 12.2 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3786) DUF3533 PF12051.8 NODE_56175_length_304_cov_65.297398_g48238_i0forward_frame_1 - 2.4 7.0 7.1 3.2 6.6 7.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) F-112 PF09645.10 NODE_56167_length_304_cov_79.546468_g48230_i0reverse_frame_1 - 0.097 12.8 0.6 0.2 11.8 0.2 1.6 1 1 1 2 2 2 0 F-112 protein PMG PF05287.12 NODE_56166_length_304_cov_80.776952_g48229_i0forward_frame_1 - 0.0026 17.8 0.0 0.0035 17.4 0.0 1.1 1 0 0 1 1 1 1 PMG protein DUF3724 PF12521.8 NODE_56165_length_304_cov_82.899628_g48228_i0reverse_frame_1 - 0.093 12.7 2.4 0.093 12.7 2.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3724) Uteroglobin PF01099.17 NODE_56158_length_304_cov_95.687732_g48221_i0forward_frame_1 - 0.13 12.7 1.0 0.16 12.3 1.0 1.3 1 0 0 1 1 1 0 Uteroglobin family RCC1_2 PF13540.6 NODE_56157_length_304_cov_98.557621_g48220_i0forward_frame_1 - 0.00023 20.9 1.7 0.39 10.6 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Citrate_synt PF00285.21 NODE_56157_length_304_cov_98.557621_g48220_i0forward_frame_1 - 0.019 14.0 0.1 0.023 13.8 0.1 1.1 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain DUF155 PF02582.14 NODE_56157_length_304_cov_98.557621_g48220_i0forward_frame_1 - 0.19 11.8 0.2 20 5.3 0.1 2.2 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PheRS_DBD2 PF18554.1 NODE_56157_length_304_cov_98.557621_g48220_i0forward_frame_1 - 0.34 11.0 7.7 2.6 8.1 0.6 2.4 2 0 0 2 2 2 0 PheRS DNA binding domain 2 GAT PF03127.14 NODE_56154_length_304_cov_114.899628_g48217_i0forward_frame_1 - 0.18 12.2 8.9 0.37 11.1 8.9 1.6 1 1 0 1 1 1 0 GAT domain DUF760 PF05542.11 NODE_56150_length_304_cov_130.494424_g48213_i0reverse_frame_1 - 0.021 15.2 0.5 0.029 14.7 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF760) EFP_N PF08207.12 NODE_56138_length_304_cov_349.553903_g48201_i0reverse_frame_1 - 0.065 13.3 0.2 0.12 12.5 0.2 1.3 1 0 0 1 1 1 0 Elongation factor P (EF-P) KOW-like domain O-ag_pol_Wzy PF14296.6 NODE_56138_length_304_cov_349.553903_g48201_i0forward_frame_1 - 0.006 15.3 0.6 0.0066 15.1 0.6 1.1 1 0 0 1 1 1 1 O-antigen polysaccharide polymerase Wzy DUF1449 PF07290.11 NODE_56133_length_305_cov_0.951852_g48197_i0forward_frame_1 - 0.024 14.3 0.2 0.029 14.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1449) Nodulin_late PF07127.11 NODE_56133_length_305_cov_0.951852_g48197_i0forward_frame_1 - 0.14 12.5 0.9 0.39 11.1 0.1 1.9 2 0 0 2 2 2 0 Late nodulin protein DUF1856 PF08983.10 NODE_56132_length_305_cov_1.122222_g48196_i0forward_frame_1 - 4.7 7.5 7.4 0.29 11.4 0.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1856) DUF5560 PF17715.1 NODE_56131_length_305_cov_1.159259_g48195_i0forward_frame_1 - 1.3 8.4 7.7 1.8 8.0 2.8 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5560) DUF4194 PF13835.6 NODE_56127_length_305_cov_1.262963_g48191_i0reverse_frame_1 - 0.024 14.4 0.1 0.027 14.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4194) tRNA_anti-codon PF01336.25 NODE_56117_length_305_cov_1.581481_g48181_i0reverse_frame_1 - 1.8e-08 34.3 0.2 2.1e-08 34.0 0.2 1.1 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF223 PF02721.14 NODE_56117_length_305_cov_1.581481_g48181_i0reverse_frame_1 - 0.00021 21.5 0.4 0.00021 21.5 0.4 1.4 2 0 0 2 2 2 1 Domain of unknown function DUF223 Phospholamban PF04272.14 NODE_56097_length_305_cov_2.344444_g48161_i0reverse_frame_1 - 2.2 7.8 15.8 3.9 7.0 0.3 2.8 2 1 1 3 3 3 0 Phospholamban PRA-CH PF01502.18 NODE_56090_length_305_cov_2.825926_g48154_i0reverse_frame_1 - 1.3e-31 108.3 0.0 1.5e-31 108.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase SHR3_chaperone PF08229.11 NODE_56087_length_305_cov_3.170370_g48151_i0reverse_frame_1 - 0.12 11.4 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 ER membrane protein SH3 Ank_2 PF12796.7 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 2e-19 70.0 0.4 8.5e-19 67.9 0.4 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 1.7e-13 49.4 0.1 0.0016 18.7 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 3e-13 49.7 1.1 0.0089 16.3 0.0 3.1 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 2.4e-12 46.7 0.4 0.018 15.4 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_1 - 1.6e-11 44.5 0.3 5.1e-07 30.1 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Rpr2 PF04032.16 NODE_56069_length_305_cov_61.177778_g48133_i0forward_frame_1 - 0.22 11.8 8.8 0.17 12.2 3.4 2.1 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain SRP-alpha_N PF04086.13 NODE_56069_length_305_cov_61.177778_g48133_i0forward_frame_1 - 3.8 7.3 9.6 4.2 7.2 9.6 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal PPR PF01535.20 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.00057 20.0 0.1 0.026 14.7 0.0 2.2 2 0 0 2 2 2 1 PPR repeat TPR_14 PF13428.6 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.0047 17.6 2.9 0.18 12.7 0.4 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat Wzy_C_2 PF11846.8 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.019 14.9 2.1 0.18 11.7 0.4 2.1 1 1 1 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal TPR_MalT PF17874.1 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.023 14.1 2.5 0.082 12.3 1.9 1.8 1 1 0 1 1 1 0 MalT-like TPR region TPR_4 PF07721.14 NODE_56059_length_305_cov_80.674074_g48123_i0reverse_frame_1 - 0.56 11.0 8.3 1 10.2 0.2 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TEX19 PF15553.6 NODE_56058_length_305_cov_80.859259_g48122_i0forward_frame_1 - 0.44 10.5 2.1 0.58 10.1 1.5 1.5 1 1 1 2 2 2 0 Testis-expressed protein 19 DUF4795 PF16043.5 NODE_56056_length_305_cov_83.529630_g48120_i0forward_frame_1 - 0.0088 15.7 0.2 0.011 15.4 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) Phage_holin_3_2 PF04550.12 NODE_56055_length_305_cov_90.188889_g48119_i0forward_frame_1 - 0.16 12.5 0.1 0.35 11.4 0.0 1.6 2 0 0 2 2 2 0 Phage holin family 2 TIG_plexin PF17960.1 NODE_56053_length_305_cov_92.681481_g48117_i0forward_frame_1 - 0.14 12.1 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 TIG domain Phenol_monoox PF04663.12 NODE_56049_length_305_cov_141.340741_g48113_i0forward_frame_1 - 0.021 15.0 0.3 0.03 14.5 0.3 1.2 1 0 0 1 1 1 0 Phenol hydroxylase conserved region Cys_rich_CPXG PF14255.6 NODE_56048_length_305_cov_147.362963_g48112_i0reverse_frame_1 - 0.018 14.9 2.2 0.029 14.3 2.2 1.3 1 0 0 1 1 1 0 Cysteine-rich CPXCG Crl PF07417.12 NODE_56048_length_305_cov_147.362963_g48112_i0reverse_frame_1 - 2.8 8.0 4.4 18 5.4 0.3 2.1 1 1 1 2 2 2 0 Sigma factor-binding transcriptional regulator Crl TPR_1 PF00515.28 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 1.7e-14 52.9 9.1 0.00012 21.8 1.7 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 3.6e-14 51.7 5.4 0.00022 21.1 0.9 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 4.7e-14 51.4 5.3 0.00023 21.1 0.3 3.1 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 5.9e-14 51.5 4.7 2.2e-08 33.6 0.2 3.1 2 2 1 3 3 3 2 TPR repeat TPR_19 PF14559.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 3.3e-10 40.3 0.0 5.5e-06 26.8 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 4.2e-09 36.2 2.3 5.1e-06 26.5 0.5 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 2.7e-08 33.3 0.3 0.0078 16.2 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 1.6e-06 28.2 2.2 2.8e-06 27.5 2.2 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 1.7e-06 28.6 0.0 9.6e-06 26.2 0.0 2.0 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 2.3e-06 27.8 0.1 0.00017 21.8 0.4 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 1.1e-05 25.8 0.0 0.013 16.3 0.0 2.9 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.00015 22.2 0.2 0.76 10.5 0.1 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.00017 21.6 2.3 0.42 10.7 0.0 3.0 3 0 0 3 3 3 2 Fis1 C-terminal tetratricopeptide repeat TPR_15 PF13429.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0026 17.0 0.0 0.12 11.5 0.0 1.9 1 1 1 2 2 2 1 Tetratricopeptide repeat RPN7 PF10602.9 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0043 16.8 1.2 0.0054 16.5 1.2 1.1 1 0 0 1 1 1 1 26S proteasome subunit RPN7 SNAP PF14938.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0047 16.4 0.9 0.0074 15.7 0.9 1.4 1 1 0 1 1 1 1 Soluble NSF attachment protein, SNAP Coatomer_E PF04733.14 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0052 16.2 0.1 0.0061 16.0 0.1 1.2 1 0 0 1 1 1 1 Coatomer epsilon subunit TPR_10 PF13374.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.0061 16.4 0.0 2.4 8.1 0.1 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat CBAH PF02275.18 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.014 15.0 0.1 0.017 14.8 0.1 1.1 1 0 0 1 1 1 0 Linear amide C-N hydrolases, choloylglycine hydrolase family DUF4919 PF16266.5 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.018 15.0 0.4 1.5 8.7 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4919) EST1_DNA_bind PF10373.9 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.02 14.4 0.8 0.027 13.9 0.5 1.4 1 1 0 1 1 1 0 Est1 DNA/RNA binding domain TPR_20 PF14561.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.022 15.1 0.1 0.031 14.6 0.1 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat MAT1 PF06391.13 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.042 13.7 2.7 0.059 13.2 2.7 1.2 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 TPR_9 PF13371.6 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.095 12.9 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat MIT PF04212.18 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.095 12.8 3.0 2.9 8.0 0.3 2.7 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain DUF3856 PF12968.7 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.13 12.3 0.4 0.33 11.0 0.4 1.9 1 1 0 1 1 1 0 Domain of Unknown Function (DUF3856) TPR_MalT PF17874.1 NODE_56048_length_305_cov_147.362963_g48112_i0forward_frame_1 - 0.2 11.0 0.0 0.77 9.1 0.0 2.0 1 1 0 1 1 1 0 MalT-like TPR region Cyclin PF08613.11 NODE_56047_length_305_cov_230.455556_g48111_i0forward_frame_1 - 0.057 13.8 0.3 0.11 12.8 0.3 1.5 1 1 0 1 1 1 0 Cyclin GATA PF00320.27 NODE_56045_length_305_cov_242.448148_g48109_i0reverse_frame_1 - 0.48 10.1 4.6 0.78 9.4 2.2 2.2 2 0 0 2 2 2 0 GATA zinc finger RasGEF_N PF00618.20 NODE_56042_length_305_cov_301.229630_g48106_i0reverse_frame_1 - 0.14 12.4 2.4 0.17 12.1 2.4 1.2 1 0 0 1 1 1 0 RasGEF N-terminal motif CCER1 PF15482.6 NODE_56042_length_305_cov_301.229630_g48106_i0reverse_frame_1 - 0.27 11.1 0.7 0.33 10.8 0.7 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF2740 PF10872.8 NODE_56039_length_305_cov_359.037037_g48103_i0forward_frame_1 - 0.0033 17.3 1.7 0.021 14.7 1.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2740) DUF4710 PF15828.5 NODE_56039_length_305_cov_359.037037_g48103_i0forward_frame_1 - 0.034 14.3 2.9 0.053 13.6 2.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DLIC PF05783.11 NODE_56030_length_306_cov_1.158672_g48094_i0reverse_frame_1 - 0.18 10.6 1.4 0.2 10.5 1.4 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) CPBP PF02517.16 NODE_56025_length_306_cov_1.328413_g48089_i0forward_frame_1 - 0.1 13.0 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease Rad10 PF03834.14 NODE_56023_length_306_cov_1.468635_g48087_i0reverse_frame_1 - 0.017 15.1 1.0 0.022 14.7 1.0 1.2 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) DUF1736 PF08409.11 NODE_56022_length_306_cov_1.468635_g48086_i0reverse_frame_1 - 0.16 12.0 1.8 0.36 10.9 1.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1736) DUF4361 PF14274.6 NODE_56013_length_306_cov_1.760148_g48077_i0reverse_frame_1 - 0.024 14.9 0.3 0.028 14.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4361) DUF4485 PF14846.6 NODE_56012_length_306_cov_1.830258_g48076_i0reverse_frame_1 - 0.023 14.7 0.1 0.037 14.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4485) MORN PF02493.20 NODE_56009_length_306_cov_1.915129_g48073_i0reverse_frame_1 - 3.2e-05 23.6 2.2 0.00025 20.7 0.5 2.2 2 0 0 2 2 2 1 MORN repeat PV_NSP1 PF12433.8 NODE_56009_length_306_cov_1.915129_g48073_i0reverse_frame_1 - 0.088 13.2 0.0 0.21 11.9 0.0 1.6 1 1 0 1 1 1 0 Parvovirus non-structural protein 1 Importin_rep_3 PF18806.1 NODE_56006_length_306_cov_2.000000_g48070_i0reverse_frame_1 - 0.058 13.4 0.0 0.08 13.0 0.0 1.2 1 0 0 1 1 1 0 Importin 13 repeat Peptidase_M16_C PF05193.21 NODE_55998_length_306_cov_2.247232_g48062_i0forward_frame_1 - 3.9e-15 56.3 0.1 4.4e-15 56.2 0.1 1.1 1 0 0 1 1 1 1 Peptidase M16 inactive domain MTTB PF06253.11 NODE_55998_length_306_cov_2.247232_g48062_i0forward_frame_1 - 0.015 13.3 0.1 0.016 13.2 0.1 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) DUF4131 PF13567.6 NODE_55996_length_306_cov_2.365314_g48060_i0reverse_frame_1 - 0.015 14.9 1.4 0.017 14.7 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3278 PF11683.8 NODE_55996_length_306_cov_2.365314_g48060_i0reverse_frame_1 - 0.032 14.3 0.7 0.053 13.6 0.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3278) Fun_ATP-synt_8 PF05933.13 NODE_55992_length_306_cov_2.457565_g48056_i0reverse_frame_1 - 0.31 11.2 2.5 2 8.7 2.5 2.1 1 1 0 1 1 1 0 Fungal ATP synthase protein 8 (A6L) ArfGap PF01412.18 NODE_55992_length_306_cov_2.457565_g48056_i0forward_frame_1 - 0.04 14.0 1.6 0.05 13.7 1.6 1.2 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf DUF2415 PF10313.9 NODE_55990_length_306_cov_2.520295_g48054_i0forward_frame_1 - 0.03 14.2 0.7 0.076 13.0 0.7 1.7 1 0 0 1 1 1 0 Uncharacterised protein domain (DUF2415) CCAP PF11105.8 NODE_55989_length_306_cov_2.538745_g48053_i0reverse_frame_1 - 0.03 14.3 0.1 0.038 13.9 0.1 1.1 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a IclR PF01614.18 NODE_55988_length_306_cov_2.549815_g48052_i0forward_frame_1 - 2e-31 108.5 0.0 2.2e-31 108.3 0.0 1.0 1 0 0 1 1 1 1 Bacterial transcriptional regulator Peptidase_C1 PF00112.23 NODE_55984_length_306_cov_2.741697_g48048_i0forward_frame_1 - 9.5e-18 65.1 0.2 1.1e-17 64.9 0.2 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Amdo_NSP PF12475.8 NODE_55978_length_306_cov_3.066421_g48042_i0forward_frame_1 - 0.1 12.7 1.0 0.15 12.1 1.0 1.3 1 0 0 1 1 1 0 Amdovirus non-structural protein Sensor_TM1 PF13755.6 NODE_55973_length_306_cov_3.335793_g48037_i0forward_frame_1 - 0.081 12.7 0.4 0.14 11.9 0.4 1.4 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain QCR10 PF09796.9 NODE_55973_length_306_cov_3.335793_g48037_i0forward_frame_1 - 0.094 12.8 0.8 0.14 12.3 0.8 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) Glyco_hydro_101 PF12905.7 NODE_55966_length_306_cov_17.501845_g48030_i0reverse_frame_1 - 0.12 11.7 0.3 0.14 11.5 0.3 1.0 1 0 0 1 1 1 0 Endo-alpha-N-acetylgalactosaminidase DUF4378 PF14309.6 NODE_55959_length_306_cov_52.878229_g48023_i0forward_frame_1 - 0.035 14.5 0.8 0.04 14.3 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4378) DUF3283 PF11686.8 NODE_55952_length_306_cov_64.468635_g48016_i0reverse_frame_1 - 0.066 13.1 0.2 0.2 11.5 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3283) zf-HIT PF04438.16 NODE_55952_length_306_cov_64.468635_g48016_i0reverse_frame_1 - 0.98 9.4 8.7 3.2 7.7 1.8 2.6 2 0 0 2 2 2 0 HIT zinc finger PolC_DP2 PF03833.13 NODE_55952_length_306_cov_64.468635_g48016_i0reverse_frame_1 - 5 4.9 7.7 5.4 4.7 7.7 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF1298 PF06974.13 NODE_55950_length_306_cov_69.335793_g48014_i0reverse_frame_1 - 9e-05 22.5 0.0 0.00011 22.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) CD34_antigen PF06365.12 NODE_55949_length_306_cov_69.483395_g48013_i0reverse_frame_1 - 0.21 11.2 6.8 0.23 11.0 6.8 1.0 1 0 0 1 1 1 0 CD34/Podocalyxin family Lipase_3 PF01764.25 NODE_55941_length_306_cov_89.918819_g48005_i0reverse_frame_1 - 0.15 12.0 0.1 0.3 10.9 0.0 1.5 2 0 0 2 2 2 0 Lipase (class 3) DUF1856 PF08983.10 NODE_55939_length_306_cov_95.535055_g48003_i0reverse_frame_1 - 0.024 14.8 0.9 0.024 14.8 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1856) SHIPPO-rpt PF07004.12 NODE_55937_length_306_cov_113.110701_g48001_i0reverse_frame_1 - 0.035 15.0 6.3 2.4 9.2 6.3 2.9 1 1 0 1 1 1 0 Sperm-tail PG-rich repeat Gln-synt_C PF00120.24 NODE_55931_length_306_cov_131.420664_g47995_i0reverse_frame_1 - 0.076 12.0 0.1 0.097 11.7 0.1 1.1 1 0 0 1 1 1 0 Glutamine synthetase, catalytic domain Lactamase_B_6 PF16661.5 NODE_55931_length_306_cov_131.420664_g47995_i0reverse_frame_1 - 0.082 12.3 0.0 0.13 11.7 0.0 1.4 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily domain Metallothi_Euk2 PF12809.7 NODE_55929_length_306_cov_142.527675_g46748_i1reverse_frame_1 - 0.013 15.8 1.0 0.018 15.3 1.0 1.2 1 0 0 1 1 1 0 Eukaryotic metallothionein OrgA_MxiK PF09482.10 NODE_55929_length_306_cov_142.527675_g46748_i1forward_frame_1 - 0.0032 17.3 0.1 0.0041 17.0 0.1 1.1 1 0 0 1 1 1 1 Bacterial type III secretion apparatus protein (OrgA_MxiK) Tail_VII PF17091.5 NODE_55917_length_306_cov_518.376384_g47982_i0reverse_frame_1 - 0.12 12.3 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Inovirus G7P protein DUF3482 PF11981.8 NODE_55911_length_306_cov_20615.365314_g47976_i0reverse_frame_1 - 0.087 12.2 8.6 0.11 11.9 8.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) NRDE-2 PF08424.10 NODE_55904_length_307_cov_1.397059_g47969_i0reverse_frame_3 - 0.096 11.8 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference RE_ApaLI PF09499.10 NODE_55903_length_307_cov_1.419118_g47968_i0forward_frame_2 - 0.036 13.8 0.3 0.038 13.7 0.3 1.2 1 0 0 1 1 1 0 ApaLI-like restriction endonuclease MMU163 PF17119.5 NODE_55902_length_307_cov_1.437500_g47967_i0reverse_frame_2 - 0.14 11.3 0.1 0.16 11.1 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis IBV_3C PF03620.13 NODE_55901_length_307_cov_1.492647_g47966_i0reverse_frame_3 - 0.031 14.7 0.2 0.043 14.3 0.2 1.2 1 0 0 1 1 1 0 IBV 3C protein RE_MamI PF09567.10 NODE_55901_length_307_cov_1.492647_g47966_i0reverse_frame_3 - 0.074 12.7 0.0 0.077 12.6 0.0 1.1 1 0 0 1 1 1 0 MamI restriction endonuclease SVM_signal PF12113.8 NODE_55901_length_307_cov_1.492647_g47966_i0forward_frame_2 - 0.031 14.2 1.6 0.11 12.4 1.6 2.1 1 0 0 1 1 1 0 SVM protein signal sequence Pkinase PF00069.25 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 4.6e-27 95.0 0.1 4.9e-27 94.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 3.7e-14 52.6 0.0 4.7e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 5.2e-05 22.7 0.0 0.00022 20.6 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.00026 19.9 0.0 0.00028 19.8 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.0011 18.3 0.0 0.0012 18.2 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.0024 16.9 0.0 0.0027 16.7 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.012 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family FTA2 PF13095.6 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.024 14.2 0.1 0.03 13.9 0.1 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 RIO1 PF01163.22 NODE_55898_length_307_cov_1.529412_g47963_i0reverse_frame_3 - 0.15 11.7 0.1 0.18 11.4 0.1 1.2 1 0 0 1 1 1 0 RIO1 family zf-P11 PF03854.14 NODE_55891_length_307_cov_1.716912_g47956_i0forward_frame_2 - 0.46 10.2 13.2 19 5.0 11.4 2.7 1 1 2 3 3 3 0 P-11 zinc finger DUF3900 PF13039.6 NODE_55889_length_307_cov_1.746324_g47954_i0forward_frame_3 - 0.54 10.1 5.4 0.46 10.4 1.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3900) Leader_Erm PF08253.11 NODE_55886_length_307_cov_1.823529_g47951_i0forward_frame_3 - 0.11 12.8 0.1 2.5 8.6 0.0 2.4 2 0 0 2 2 2 0 Erm Leader peptide RVT_1 PF00078.27 NODE_55883_length_307_cov_1.875000_g47948_i0forward_frame_3 - 8.2e-05 22.2 0.0 9.7e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Peptidase_C41 PF05417.11 NODE_55882_length_307_cov_1.897059_g47947_i0forward_frame_2 - 0.11 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Hepatitis E cysteine protease Sugar_tr PF00083.24 NODE_55881_length_307_cov_1.900735_g47946_i0forward_frame_2 - 1.3e-08 34.1 6.6 1.5e-08 34.0 6.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF3511 PF12023.8 NODE_55878_length_307_cov_1.992647_g47943_i0reverse_frame_2 - 0.15 11.9 2.6 10 6.1 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3511) KH_4 PF13083.6 NODE_55873_length_307_cov_2.198529_g47938_i0forward_frame_2 - 0.25 11.3 0.7 0.39 10.6 0.7 1.2 1 0 0 1 1 1 0 KH domain Sugar_tr PF00083.24 NODE_55872_length_307_cov_2.301471_g47937_i0reverse_frame_2 - 4.5e-12 45.6 0.4 5e-12 45.4 0.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_55872_length_307_cov_2.301471_g47937_i0reverse_frame_2 - 0.0026 16.7 0.2 0.0031 16.5 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Tricorn_C1 PF14684.6 NODE_55871_length_307_cov_2.327206_g47936_i0reverse_frame_3 - 0.0024 17.9 0.0 0.0045 17.0 0.0 1.4 1 0 0 1 1 1 1 Tricorn protease C1 domain PTase_Orf2 PF11468.8 NODE_55870_length_307_cov_2.349265_g47935_i0reverse_frame_3 - 0.059 12.8 0.0 0.065 12.6 0.0 1.1 1 0 0 1 1 1 0 Aromatic prenyltransferase Orf2 ExoD PF06055.12 NODE_55870_length_307_cov_2.349265_g47935_i0forward_frame_3 - 0.033 13.6 1.1 0.04 13.3 1.1 1.2 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD Apo-CIII PF05778.12 NODE_55868_length_307_cov_2.422794_g47933_i0reverse_frame_3 - 0.031 13.9 0.2 0.44 10.2 0.2 2.1 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) DUF3086 PF11285.8 NODE_55868_length_307_cov_2.422794_g47933_i0reverse_frame_3 - 0.088 11.9 2.4 0.089 11.9 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) NYD-SP28_assoc PF14775.6 NODE_55860_length_307_cov_2.819853_g47925_i0forward_frame_2 - 1.7e-05 24.8 0.5 2.3e-05 24.4 0.5 1.2 1 0 0 1 1 1 1 Sperm tail C-terminal domain V_ATPase_I PF01496.19 NODE_55854_length_307_cov_2.977941_g47919_i0reverse_frame_2 - 1.4e-31 109.3 2.3 1.5e-31 109.2 2.3 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family GAGA PF09237.11 NODE_55852_length_307_cov_3.073529_g47917_i0reverse_frame_2 - 0.063 13.1 0.2 0.11 12.3 0.2 1.4 1 0 0 1 1 1 0 GAGA factor zf-RING_UBOX PF13445.6 NODE_55850_length_307_cov_3.209559_g47915_i0reverse_frame_2 - 0.012 15.6 1.9 0.012 15.6 1.9 2.5 2 1 1 3 3 3 0 RING-type zinc-finger Maelstrom PF13017.6 NODE_55850_length_307_cov_3.209559_g47915_i0forward_frame_3 - 0.0058 16.3 2.9 0.0058 16.3 2.9 1.3 2 0 0 2 2 2 1 piRNA pathway germ-plasm component Melittin PF01372.17 NODE_55850_length_307_cov_3.209559_g47915_i0forward_frame_2 - 0.042 13.8 0.5 5.2 7.2 0.0 2.4 2 0 0 2 2 2 0 Melittin IlvC PF01450.19 NODE_55849_length_307_cov_3.238971_g47914_i0forward_frame_2 - 0.035 14.4 0.0 0.043 14.1 0.0 1.1 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain Ion_trans PF00520.31 NODE_55838_length_307_cov_56.147059_g47903_i0forward_frame_2 - 5.6e-12 45.4 1.0 6.2e-12 45.3 1.0 1.0 1 0 0 1 1 1 1 Ion transport protein DUF1617 PF07761.12 NODE_55837_length_307_cov_57.713235_g47902_i0reverse_frame_2 - 0.13 12.4 0.6 0.15 12.2 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1617) zf-C2H2_9 PF16293.5 NODE_55837_length_307_cov_57.713235_g47902_i0forward_frame_3 - 0.11 12.3 0.3 0.18 11.6 0.3 1.4 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) Gon7 PF08738.10 NODE_55834_length_307_cov_64.106618_g47899_i0forward_frame_3 - 0.056 13.5 0.4 0.062 13.4 0.4 1.2 1 0 0 1 1 1 0 Gon7 family zf-C2H2 PF00096.26 NODE_55825_length_307_cov_79.875000_g47890_i0reverse_frame_3 - 0.00071 19.9 0.6 0.0015 18.9 0.3 1.7 1 1 1 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_3 PF13878.6 NODE_55825_length_307_cov_79.875000_g47890_i0reverse_frame_3 - 0.0052 16.6 0.7 0.034 14.0 0.2 2.3 2 0 0 2 2 2 1 zinc-finger of acetyl-transferase ESCO zf-C2H2_4 PF13894.6 NODE_55825_length_307_cov_79.875000_g47890_i0reverse_frame_3 - 0.0055 17.4 0.3 0.011 16.5 0.2 1.6 1 1 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 NODE_55825_length_307_cov_79.875000_g47890_i0reverse_frame_3 - 0.0093 15.7 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 zinc-finger C2H2-type DUF3903 PF13043.6 NODE_55824_length_307_cov_79.919118_g47889_i0reverse_frame_3 - 0.15 11.9 2.7 0.27 11.0 2.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) PEX11 PF05648.14 NODE_55822_length_307_cov_83.327206_g47887_i0forward_frame_2 - 0.00026 20.5 0.0 0.00032 20.2 0.0 1.1 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) TAXi_N PF14543.6 NODE_55820_length_307_cov_101.202206_g47885_i0reverse_frame_3 - 1.4 9.1 5.8 1.7 8.8 5.8 1.1 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal SH3_16 PF18348.1 NODE_55819_length_307_cov_110.341912_g47884_i0forward_frame_2 - 0.0077 16.0 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial dipeptidyl-peptidase Sh3 domain SH3_3 PF08239.11 NODE_55819_length_307_cov_110.341912_g47884_i0forward_frame_2 - 0.0095 16.2 0.4 0.025 14.9 0.4 1.6 1 1 0 1 1 1 1 Bacterial SH3 domain RRP7 PF12923.7 NODE_55819_length_307_cov_110.341912_g47884_i0forward_frame_2 - 0.012 15.8 1.2 0.018 15.2 1.2 1.3 1 0 0 1 1 1 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain PHO4 PF01384.20 NODE_55818_length_307_cov_115.926471_g47883_i0reverse_frame_3 - 0.041 12.9 0.1 0.046 12.8 0.1 1.0 1 0 0 1 1 1 0 Phosphate transporter family DUF281 PF03436.13 NODE_55817_length_307_cov_130.172794_g47882_i0reverse_frame_2 - 0.072 13.5 0.4 0.13 12.7 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF281) ART PF01129.18 NODE_55815_length_307_cov_158.812500_g47880_i0reverse_frame_2 - 0.073 12.4 0.0 0.095 12.0 0.0 1.2 1 0 0 1 1 1 0 NAD:arginine ADP-ribosyltransferase Katanin_con80 PF13925.6 NODE_55807_length_307_cov_329.216912_g47872_i0reverse_frame_2 - 4.3e-18 65.9 0.0 4.7e-18 65.7 0.0 1.0 1 0 0 1 1 1 1 con80 domain of Katanin S_2TMBeta PF18153.1 NODE_55805_length_307_cov_527.937500_g47870_i0forward_frame_2 - 0.0077 16.0 1.1 0.0092 15.8 1.1 1.2 1 0 0 1 1 1 1 SMODS-associating 2TM, beta-strand rich effector domain AF2331-like PF14556.6 NODE_55800_length_308_cov_1.260073_g47865_i0forward_frame_2 - 0.11 13.0 0.1 0.14 12.7 0.1 1.3 1 0 0 1 1 1 0 AF2331-like TadZ_N PF16968.5 NODE_55799_length_308_cov_1.318681_g47864_i0forward_frame_2 - 0.017 14.8 0.2 0.021 14.5 0.2 1.3 1 0 0 1 1 1 0 Pilus assembly protein TadZ N-terminal VirArc_Nuclease PF12187.8 NODE_55798_length_308_cov_1.373626_g47863_i0forward_frame_2 - 0.014 14.9 0.5 0.016 14.7 0.5 1.1 1 0 0 1 1 1 0 Viral/Archaeal nuclease N1221 PF07923.13 NODE_55796_length_308_cov_1.498168_g47861_i0reverse_frame_3 - 0.083 12.1 0.2 0.097 11.8 0.2 1.0 1 0 0 1 1 1 0 N1221-like protein Pertactin PF03212.14 NODE_55796_length_308_cov_1.498168_g47861_i0reverse_frame_2 - 0.009 15.9 0.0 0.016 15.1 0.0 1.5 1 0 0 1 1 1 1 Pertactin SNARE PF05739.19 NODE_55796_length_308_cov_1.498168_g47861_i0forward_frame_2 - 0.096 12.7 0.5 0.096 12.7 0.5 1.6 2 0 0 2 2 2 0 SNARE domain AAA_lid_10 PF17872.1 NODE_55795_length_308_cov_1.531136_g47860_i0reverse_frame_3 - 0.074 13.2 0.0 0.36 11.0 0.0 1.8 2 0 0 2 2 2 0 AAA lid domain Sec1 PF00995.23 NODE_55792_length_308_cov_1.615385_g47857_i0reverse_frame_3 - 1.5e-09 37.6 0.3 1.7e-09 37.5 0.3 1.0 1 0 0 1 1 1 1 Sec1 family C2 PF00168.30 NODE_55791_length_308_cov_1.619048_g47856_i0reverse_frame_3 - 7.5e-16 58.3 0.0 8.5e-16 58.1 0.0 1.0 1 0 0 1 1 1 1 C2 domain Zfx_Zfy_act PF04704.13 NODE_55791_length_308_cov_1.619048_g47856_i0reverse_frame_3 - 0.18 10.9 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region RCC1 PF00415.18 NODE_55786_length_308_cov_1.747253_g47851_i0reverse_frame_3 - 0.14 12.8 0.1 0.41 11.3 0.1 1.8 1 1 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat BRE1 PF08647.11 NODE_55785_length_308_cov_1.754579_g47850_i0forward_frame_2 - 0.018 15.1 2.3 0.018 15.1 2.3 1.6 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase XhlA PF10779.9 NODE_55785_length_308_cov_1.754579_g47850_i0forward_frame_2 - 0.11 12.7 4.7 0.18 12.0 4.7 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Connexin PF00029.19 NODE_55784_length_308_cov_1.765568_g47849_i0forward_frame_3 - 0.0088 15.8 1.7 0.01 15.6 1.7 1.1 1 0 0 1 1 1 1 Connexin DUF3788 PF12663.7 NODE_55782_length_308_cov_1.831502_g47847_i0forward_frame_2 - 0.086 12.8 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3788) DMPK_coil PF08826.10 NODE_55781_length_308_cov_1.846154_g47846_i0reverse_frame_3 - 0.15 12.2 0.7 0.15 12.2 0.7 1.6 2 0 0 2 2 2 0 DMPK coiled coil domain like p53-inducible11 PF14936.6 NODE_55780_length_308_cov_1.853480_g47845_i0forward_frame_3 - 0.048 13.7 0.2 0.054 13.5 0.2 1.2 1 0 0 1 1 1 0 Tumour protein p53-inducible protein 11 DUF3975 PF13126.6 NODE_55777_length_308_cov_1.864469_g47842_i0reverse_frame_3 - 0.025 15.0 0.5 0.038 14.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) DUF603 PF04645.12 NODE_55777_length_308_cov_1.864469_g47842_i0forward_frame_2 - 0.015 15.1 1.0 0.017 14.9 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF603 BIRC6 PF12356.8 NODE_55775_length_308_cov_1.934066_g47840_i0reverse_frame_2 - 0.11 12.0 1.3 0.13 11.6 1.3 1.2 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 YqzH PF14164.6 NODE_55775_length_308_cov_1.934066_g47840_i0forward_frame_3 - 0.019 15.0 0.2 0.034 14.2 0.2 1.5 1 1 0 1 1 1 0 YqzH-like protein IL2RB_N1 PF18707.1 NODE_55775_length_308_cov_1.934066_g47840_i0forward_frame_2 - 0.012 16.1 3.5 0.012 16.1 3.5 1.4 1 1 0 1 1 1 0 Interleukin-2 receptor subunit beta N-terminal domain 1 MADF_DNA_bdg PF10545.9 NODE_55772_length_308_cov_1.996337_g47837_i0forward_frame_2 - 0.06 13.7 0.0 0.092 13.1 0.0 1.2 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks260.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks260.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks260.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks260.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:10:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MCM2_N PF12619.8 NODE_55769_length_308_cov_2.150183_g47834_i0reverse_frame_2 - 1e-14 55.1 18.3 1.1e-14 54.9 18.3 1.0 1 0 0 1 1 1 1 Mini-chromosome maintenance protein 2 SO_alpha_A3 PF17806.1 NODE_55769_length_308_cov_2.150183_g47834_i0reverse_frame_2 - 0.0037 17.6 0.0 0.0047 17.2 0.0 1.2 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain Telomere_Sde2_2 PF13297.6 NODE_55767_length_308_cov_2.194139_g47832_i0reverse_frame_3 - 0.13 11.9 0.1 0.2 11.3 0.1 1.2 1 0 0 1 1 1 0 Telomere stability C-terminal DUF772 PF05598.11 NODE_55766_length_308_cov_2.212454_g47831_i0reverse_frame_2 - 0.12 12.4 0.0 3.3 7.8 0.0 2.0 2 0 0 2 2 2 0 Transposase domain (DUF772) YoqO PF14037.6 NODE_55766_length_308_cov_2.212454_g47831_i0forward_frame_2 - 0.026 15.1 0.9 0.052 14.1 0.9 1.6 1 1 0 1 1 1 0 YoqO-like protein Pro_sub2 PF18513.1 NODE_55765_length_308_cov_2.227106_g47830_i0forward_frame_3 - 0.014 15.5 0.5 0.018 15.2 0.5 1.3 1 0 0 1 1 1 0 Prodomain subtilisin 2 TraN PF06986.11 NODE_55764_length_308_cov_2.289377_g47829_i0reverse_frame_3 - 0.025 14.3 1.6 0.029 14.1 1.6 1.0 1 0 0 1 1 1 0 Type-1V conjugative transfer system mating pair stabilisation Telomere_Sde2_2 PF13297.6 NODE_55761_length_308_cov_2.336996_g47826_i0forward_frame_3 - 0.14 11.9 0.1 0.2 11.3 0.1 1.2 1 0 0 1 1 1 0 Telomere stability C-terminal MbtH PF03621.13 NODE_55760_length_308_cov_2.340659_g47825_i0reverse_frame_3 - 0.16 11.4 0.6 0.29 10.6 0.6 1.4 1 0 0 1 1 1 0 MbtH-like protein SVA PF05326.11 NODE_55755_length_308_cov_2.534799_g47820_i0forward_frame_3 - 0.015 15.3 0.5 0.019 14.9 0.5 1.3 1 0 0 1 1 1 0 Seminal vesicle autoantigen (SVA) Tropomyosin_1 PF12718.7 NODE_55755_length_308_cov_2.534799_g47820_i0forward_frame_2 - 0.024 14.8 0.2 0.031 14.4 0.2 1.2 1 0 0 1 1 1 0 Tropomyosin like DUF4328 PF14219.6 NODE_55754_length_308_cov_2.721612_g47819_i0reverse_frame_2 - 0.017 14.7 3.8 5.2 6.6 4.2 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4328) OapA_N PF08525.11 NODE_55754_length_308_cov_2.721612_g47819_i0forward_frame_2 - 1.4 8.9 4.5 6.3 6.9 0.2 2.7 3 0 0 3 3 3 0 Opacity-associated protein A N-terminal motif Fer2 PF00111.27 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_3 - 0.28 11.2 6.0 0.14 12.2 3.2 1.9 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain DUF4184 PF13803.6 NODE_55749_length_308_cov_3.040293_g47814_i0reverse_frame_2 - 0.13 12.0 0.0 0.15 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4184) DUF5400 PF17379.2 NODE_55749_length_308_cov_3.040293_g47814_i0forward_frame_2 - 0.0071 16.8 1.4 0.0086 16.5 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5400) Usher PF00577.20 NODE_55748_length_308_cov_3.113553_g47813_i0reverse_frame_3 - 6.4e-43 147.4 0.3 6.9e-43 147.3 0.3 1.0 1 0 0 1 1 1 1 Outer membrane usher protein Kelch_4 PF13418.6 NODE_55745_length_308_cov_3.267399_g47810_i0forward_frame_2 - 0.012 15.6 0.0 0.021 14.8 0.0 1.4 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_55745_length_308_cov_3.267399_g47810_i0forward_frame_2 - 0.028 14.7 0.0 0.11 12.8 0.0 1.8 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_55745_length_308_cov_3.267399_g47810_i0forward_frame_2 - 0.038 14.0 0.0 0.069 13.2 0.0 1.4 1 0 0 1 1 1 0 Kelch motif SR-25 PF10500.9 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_3 - 0.017 14.7 17.7 0.023 14.3 17.7 1.4 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4614 PF15391.6 NODE_55744_length_308_cov_3.326007_g47809_i0reverse_frame_3 - 0.91 9.5 11.2 1.1 9.3 11.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) DUF4149 PF13664.6 NODE_55744_length_308_cov_3.326007_g47809_i0forward_frame_2 - 0.014 15.7 1.6 0.026 14.9 1.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4149) DUF5445 PF17520.2 NODE_55742_length_308_cov_3.901099_g47807_i0reverse_frame_2 - 3.6 7.5 9.1 0.82 9.6 1.3 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5445) DUF2026 PF09641.10 NODE_55742_length_308_cov_3.901099_g47807_i0forward_frame_3 - 0.014 15.0 0.4 0.018 14.7 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2026) ASL_C PF08328.11 NODE_55742_length_308_cov_3.901099_g47807_i0forward_frame_3 - 0.057 13.5 0.3 0.076 13.1 0.3 1.2 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal Topoisom_I PF01028.20 NODE_55742_length_308_cov_3.901099_g47807_i0forward_frame_2 - 8.4e-36 123.4 3.0 9.1e-36 123.2 3.0 1.0 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core PAC1 PF16094.5 NODE_55742_length_308_cov_3.901099_g47807_i0forward_frame_2 - 0.011 14.9 0.1 0.014 14.6 0.1 1.2 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Hira PF07569.11 NODE_55735_length_308_cov_49.655678_g47800_i0forward_frame_2 - 0.048 13.4 0.0 0.066 12.9 0.0 1.2 1 0 0 1 1 1 0 TUP1-like enhancer of split WD40 PF00400.32 NODE_55735_length_308_cov_49.655678_g47800_i0forward_frame_2 - 0.06 14.2 0.6 0.23 12.4 0.6 2.1 1 1 0 1 1 1 0 WD domain, G-beta repeat Imm75 PF15660.6 NODE_55735_length_308_cov_49.655678_g47800_i0forward_frame_2 - 0.085 13.1 0.0 0.18 12.1 0.0 1.6 1 1 1 2 2 2 0 Putative Immunity protein 75 PQQ_2 PF13360.6 NODE_55735_length_308_cov_49.655678_g47800_i0forward_frame_2 - 0.21 11.1 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 PQQ-like domain ASFV_360 PF01671.16 NODE_55734_length_308_cov_50.717949_g47799_i0forward_frame_2 - 0.0015 18.1 0.6 0.0017 17.9 0.6 1.1 1 0 0 1 1 1 1 African swine fever virus multigene family 360 protein Porin_3 PF01459.22 NODE_55732_length_308_cov_54.216117_g47797_i0forward_frame_3 - 0.021 14.3 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic porin Fer2_4 PF13510.6 NODE_55731_length_308_cov_55.487179_g47796_i0forward_frame_3 - 0.35 10.9 4.3 0.62 10.1 4.3 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain WHIM1 PF15612.6 NODE_55724_length_308_cov_67.340659_g47789_i0reverse_frame_3 - 0.45 10.1 2.3 1.8 8.2 0.3 2.1 2 0 0 2 2 2 0 WSTF, HB1, Itc1p, MBD9 motif 1 YuiB PF14068.6 NODE_55724_length_308_cov_67.340659_g47789_i0reverse_frame_2 - 3 8.5 8.4 0.16 12.6 1.9 1.9 1 1 0 2 2 2 0 Putative membrane protein Ribosomal_60s PF00428.19 NODE_55722_length_308_cov_69.835165_g47787_i0reverse_frame_3 - 0.041 14.5 0.3 0.05 14.2 0.3 1.2 1 0 0 1 1 1 0 60s Acidic ribosomal protein DUF3291 PF11695.8 NODE_55715_length_308_cov_95.395604_g47780_i0reverse_frame_3 - 0.14 11.8 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3291) T2SSM_b PF10741.9 NODE_55713_length_308_cov_100.556777_g47778_i0forward_frame_2 - 0.061 13.1 0.2 0.074 12.9 0.2 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M subtype b OSTbeta PF15048.6 NODE_55713_length_308_cov_100.556777_g47778_i0forward_frame_2 - 0.12 12.5 0.9 0.15 12.2 0.9 1.1 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein Sp38 PF07354.12 NODE_55711_length_308_cov_121.216117_g47776_i0forward_frame_3 - 0.068 12.6 2.3 0.097 12.1 2.3 1.2 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) Sarcoglycan_1 PF04790.13 NODE_55708_length_308_cov_158.989011_g47773_i0forward_frame_3 - 0.037 13.4 0.1 0.039 13.3 0.1 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein DUF3128 PF11326.8 NODE_55707_length_308_cov_159.252747_g47772_i0reverse_frame_3 - 0.052 13.9 0.7 0.077 13.4 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3128) Sterol-sensing PF12349.8 NODE_55705_length_308_cov_204.131868_g47770_i0forward_frame_2 - 0.23 11.3 9.9 0.85 9.4 8.6 1.9 1 1 1 2 2 2 0 Sterol-sensing domain of SREBP cleavage-activation OrfB_Zn_ribbon PF07282.11 NODE_55702_length_308_cov_263.384615_g47767_i0forward_frame_2 - 0.032 14.2 0.8 0.052 13.5 0.5 1.6 1 1 0 1 1 1 0 Putative transposase DNA-binding domain MORN PF02493.20 NODE_55700_length_308_cov_342.516484_g47765_i0forward_frame_3 - 3.1e-18 64.5 21.3 4.1e-07 29.5 0.9 3.8 4 0 0 4 4 4 3 MORN repeat Calponin PF00402.18 NODE_55698_length_308_cov_1117.018315_g47763_i0reverse_frame_2 - 0.33 10.6 1.3 0.37 10.5 0.2 1.6 2 0 0 2 2 2 0 Calponin family repeat Thionin PF00321.17 NODE_55697_length_308_cov_1131.948718_g47762_i0reverse_frame_3 - 0.57 10.7 0.2 0.57 10.7 0.2 2.5 2 1 0 2 2 2 0 Plant thionin zf-C5HC2 PF02928.16 NODE_55697_length_308_cov_1131.948718_g47762_i0forward_frame_3 - 5.3e-06 26.7 18.5 7.8e-06 26.2 18.5 1.3 1 0 0 1 1 1 1 C5HC2 zinc finger TMEM52 PF14979.6 NODE_55697_length_308_cov_1131.948718_g47762_i0forward_frame_2 - 0.0077 16.2 0.6 0.0097 15.8 0.6 1.1 1 0 0 1 1 1 1 Transmembrane 52 DUF3482 PF11981.8 NODE_55695_length_308_cov_20301.783883_g47760_i0forward_frame_3 - 0.007 15.8 5.6 0.008 15.6 5.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) RNF220 PF15926.5 NODE_55693_length_308_cov_56529.959707_g47758_i0reverse_frame_2 - 0.13 11.8 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase RNF220 7tm_1 PF00001.21 NODE_55691_length_309_cov_1.218978_g47756_i0reverse_frame_3 - 6.5 6.0 7.3 19 4.5 7.3 1.9 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) CitX PF03802.14 NODE_55687_length_309_cov_1.529197_g47752_i0reverse_frame_2 - 1.6 8.4 5.0 2.4 7.9 5.0 1.3 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GCR1_C PF12550.8 NODE_55686_length_309_cov_1.591241_g47751_i0forward_frame_2 - 0.094 13.0 0.3 0.18 12.2 0.3 1.6 1 1 0 1 1 1 0 Transcriptional activator of glycolytic enzymes zf-CCHC_2 PF13696.6 NODE_55685_length_309_cov_1.635036_g47750_i0reverse_frame_3 - 6.3 6.7 7.6 0.39 10.6 0.6 2.3 3 0 0 3 3 3 0 Zinc knuckle TRP PF06011.12 NODE_55685_length_309_cov_1.635036_g47750_i0forward_frame_3 - 0.028 13.2 0.0 0.031 13.0 0.0 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel PriCT_2 PF08707.11 NODE_55685_length_309_cov_1.635036_g47750_i0forward_frame_2 - 0.071 13.5 0.1 0.11 12.9 0.1 1.2 1 0 0 1 1 1 0 Primase C terminal 2 (PriCT-2) VWA_N PF08399.11 NODE_55684_length_309_cov_1.656934_g47749_i0reverse_frame_2 - 0.0071 16.8 1.0 0.0094 16.4 1.0 1.1 1 0 0 1 1 1 1 VWA N-terminal zf-C3H2C3 PF17122.5 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 1.5e-05 24.9 7.5 3.6e-05 23.7 7.7 1.6 1 1 0 1 1 1 1 Zinc-finger zf-RING_UBOX PF13445.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 3.1e-05 23.9 4.8 8.5e-05 22.5 4.6 1.8 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.00024 20.9 7.7 0.0021 17.8 8.3 2.0 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.0021 17.9 0.8 0.0028 17.5 0.8 1.2 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-RING_5 PF14634.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.0022 17.9 8.9 0.0035 17.3 8.9 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.021 14.7 5.1 0.13 12.1 5.1 2.1 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.03 14.7 8.6 0.066 13.6 8.6 1.6 1 1 0 1 1 1 0 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.14 12.1 6.1 0.2 11.5 6.1 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.23 11.1 9.3 3.8 7.2 9.9 2.2 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type zf-rbx1 PF12678.7 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 0.67 10.3 8.6 8.6 6.7 8.6 2.2 1 1 1 2 2 2 0 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 1.4 8.7 10.4 0.53 10.1 5.5 2.4 2 1 0 2 2 2 0 RING-like zinc finger Zf_RING PF16744.5 NODE_55682_length_309_cov_1.715328_g47747_i0forward_frame_3 - 4.5 7.5 9.4 7.7 6.7 4.3 2.8 1 1 2 3 3 3 0 KIAA1045 RING finger GDP_Man_Dehyd PF16363.5 NODE_55679_length_309_cov_1.737226_g47744_i0forward_frame_2 - 7.9e-19 68.2 0.0 8.4e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_55679_length_309_cov_1.737226_g47744_i0forward_frame_2 - 1.8e-11 44.0 0.1 4.6e-11 42.6 0.0 1.6 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family DNA_pol3_tau_5 PF12170.8 NODE_55677_length_309_cov_1.901460_g47742_i0reverse_frame_2 - 0.064 13.3 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase III tau subunit V interacting with alpha Pox_A32 PF04665.12 NODE_55676_length_309_cov_1.901460_g47741_i0reverse_frame_2 - 2.3e-06 27.3 0.6 2.7e-06 27.0 0.6 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein CLU_N PF15044.6 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_3 - 0.0019 18.5 0.3 0.0031 17.9 0.3 1.3 1 0 0 1 1 1 1 Mitochondrial function, CLU-N-term HOOK PF05622.12 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.0054 15.0 9.2 0.0071 14.6 9.2 1.3 1 1 0 1 1 1 1 HOOK protein Cep57_CLD_2 PF14197.6 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.006 16.6 3.9 0.49 10.5 0.1 2.5 2 1 0 2 2 2 2 Centrosome localisation domain of PPC89 FliJ PF02050.16 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.014 15.6 6.0 0.02 15.1 6.0 1.3 1 0 0 1 1 1 0 Flagellar FliJ protein SOGA PF11365.8 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.025 15.7 3.5 0.039 15.1 3.5 1.3 1 0 0 1 1 1 0 Protein SOGA Fib_alpha PF08702.10 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.046 13.9 1.4 0.046 13.9 1.4 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.27 10.1 11.5 0.32 9.8 11.5 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein YlqD PF11068.8 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.75 10.2 10.8 0.23 11.8 1.9 2.0 1 1 1 2 2 2 0 YlqD protein SlyX PF04102.12 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 0.75 10.5 3.4 8.2 7.1 0.8 2.1 1 1 1 2 2 2 0 SlyX DUF4407 PF14362.6 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 1.6 8.0 8.2 1.7 8.0 8.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YabA PF06156.13 NODE_55674_length_309_cov_1.974453_g47739_i0forward_frame_2 - 3.2 8.4 11.7 3.6 8.3 2.3 2.0 1 1 1 2 2 2 0 Initiation control protein YabA MerR PF00376.23 NODE_55672_length_309_cov_2.010949_g47737_i0forward_frame_2 - 0.094 12.5 0.0 0.35 10.7 0.0 2.0 1 0 0 1 1 1 0 MerR family regulatory protein Nitroreductase PF00881.24 NODE_55669_length_309_cov_2.204380_g47734_i0forward_frame_3 - 4.8e-10 39.7 0.1 6.1e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 NODE_55669_length_309_cov_2.204380_g47734_i0forward_frame_3 - 0.016 14.8 0.0 0.019 14.6 0.0 1.1 1 0 0 1 1 1 0 Putative TM nitroreductase Kinesin PF00225.23 NODE_55668_length_309_cov_2.262774_g47733_i0reverse_frame_3 - 0.0002 20.4 0.1 0.00021 20.3 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_55668_length_309_cov_2.262774_g47733_i0reverse_frame_3 - 0.013 15.4 0.3 0.019 14.9 0.3 1.4 1 1 0 1 1 1 0 Microtubule binding DUF92 PF01940.16 NODE_55664_length_309_cov_2.467153_g47729_i0reverse_frame_2 - 0.017 14.6 0.4 0.018 14.5 0.4 1.1 1 0 0 1 1 1 0 Integral membrane protein DUF92 SPATA1_C PF15743.5 NODE_55663_length_309_cov_2.536496_g47728_i0forward_frame_2 - 0.032 14.3 1.5 0.039 14.0 1.5 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus DOMON PF03351.17 NODE_55661_length_309_cov_2.656934_g47726_i0reverse_frame_3 - 6.3e-09 36.1 0.0 7.3e-09 35.9 0.0 1.1 1 0 0 1 1 1 1 DOMON domain Glyco_hydro_65C PF03633.15 NODE_55661_length_309_cov_2.656934_g47726_i0reverse_frame_3 - 0.08 12.9 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain CTD_bind PF04818.13 NODE_55660_length_309_cov_2.729927_g47725_i0reverse_frame_2 - 0.026 15.4 0.1 0.045 14.6 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase II-binding domain. Carla_C4 PF01623.17 NODE_55654_length_309_cov_3.339416_g47719_i0reverse_frame_3 - 0.092 12.7 0.1 0.14 12.1 0.1 1.3 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein FUSC-like PF12805.7 NODE_55654_length_309_cov_3.339416_g47719_i0reverse_frame_2 - 0.079 12.0 0.0 0.099 11.7 0.0 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Treacle PF03546.14 NODE_55654_length_309_cov_3.339416_g47719_i0forward_frame_2 - 0.056 12.3 0.1 0.063 12.1 0.1 1.0 1 0 0 1 1 1 0 Treacher Collins syndrome protein Treacle TMEM247 PF15444.6 NODE_55649_length_309_cov_4.229927_g47714_i0forward_frame_3 - 8.9 6.3 6.9 4.4 7.3 5.4 1.3 1 1 0 1 1 1 0 Transmembrane protein 247 Imm15 PF15561.6 NODE_55649_length_309_cov_4.229927_g47714_i0forward_frame_2 - 0.37 11.0 7.0 0.42 10.8 7.0 1.1 1 0 0 1 1 1 0 Immunity protein 15 Lamprin PF06403.11 NODE_55645_length_309_cov_5.500000_g47710_i0forward_frame_3 - 3 7.8 18.1 2.4 8.1 5.7 2.1 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_55645_length_309_cov_5.500000_g47710_i0forward_frame_2 - 2.5 8.0 20.9 0.36 10.8 5.8 2.1 1 1 1 2 2 2 0 Lamprin MFA1_2 PF17317.2 NODE_55643_length_309_cov_14.368613_g47708_i0reverse_frame_3 - 0.3 10.9 2.2 0.48 10.2 2.2 1.3 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 BaffR-Tall_bind PF09256.10 NODE_55642_length_309_cov_24.839416_g47707_i0reverse_frame_2 - 0.1 12.4 0.4 0.1 12.4 0.4 1.9 2 0 0 2 2 2 0 BAFF-R, TALL-1 binding EamA PF00892.20 NODE_55642_length_309_cov_24.839416_g47707_i0forward_frame_3 - 0.00013 22.2 0.9 0.00016 21.8 0.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family Adeno_E3_14_5 PF04834.12 NODE_55640_length_309_cov_45.368613_g47705_i0forward_frame_3 - 0.13 12.8 4.2 0.12 12.9 3.3 1.4 1 1 0 1 1 1 0 Early E3 14.5 kDa protein GvpL_GvpF PF06386.11 NODE_55635_length_309_cov_56.346715_g47700_i0reverse_frame_3 - 0.17 11.8 0.4 0.2 11.6 0.4 1.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF CDP-OH_P_tran_2 PF08009.11 NODE_55633_length_309_cov_60.065693_g47698_i0forward_frame_3 - 0.14 12.1 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase 2 GNT-I PF03071.15 NODE_55633_length_309_cov_60.065693_g47698_i0forward_frame_3 - 0.27 9.9 0.2 0.31 9.8 0.2 1.0 1 0 0 1 1 1 0 GNT-I family DUF551 PF04448.12 NODE_55631_length_309_cov_61.605839_g47696_i0reverse_frame_3 - 0.04 14.9 0.1 0.058 14.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF551) DUF1364 PF07102.12 NODE_55628_length_309_cov_65.072993_g47693_i0forward_frame_2 - 0.34 10.8 3.0 1.9 8.4 3.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1364) ArabFuran-catal PF09206.11 NODE_55627_length_309_cov_66.240876_g47692_i0reverse_frame_3 - 0.056 12.7 1.2 0.062 12.6 1.2 1.0 1 0 0 1 1 1 0 Alpha-L-arabinofuranosidase B, catalytic RepB-RCR_reg PF10723.9 NODE_55624_length_309_cov_73.875912_g47689_i0reverse_frame_3 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Replication regulatory protein RepB ETRAMP PF09716.10 NODE_55624_length_309_cov_73.875912_g47689_i0reverse_frame_3 - 0.74 9.9 3.2 1 9.5 3.2 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DAG1 PF05454.11 NODE_55618_length_309_cov_84.905109_g47683_i0forward_frame_3 - 0.015 14.7 2.5 0.016 14.6 2.5 1.2 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) DUF434 PF04256.12 NODE_55616_length_309_cov_92.040146_g47681_i0forward_frame_3 - 0.14 11.9 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF434) HeLo PF14479.6 NODE_55616_length_309_cov_92.040146_g47681_i0forward_frame_2 - 0.2 11.5 0.0 0.3 10.9 0.0 1.3 1 1 0 1 1 1 0 Prion-inhibition and propagation 7TM_GPCR_Srt PF10321.9 NODE_55615_length_309_cov_93.799270_g47680_i0reverse_frame_2 - 0.0071 15.4 8.8 0.0087 15.1 8.8 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srt Toxin_37 PF11415.8 NODE_55615_length_309_cov_93.799270_g47680_i0forward_frame_3 - 2.1 8.3 11.9 6.7 6.6 1.7 2.7 2 0 0 2 2 2 0 Antifungal peptide termicin FAINT PF04385.15 NODE_55613_length_309_cov_104.386861_g47678_i0reverse_frame_3 - 0.064 13.3 0.3 0.097 12.7 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function, DUF529 DUF4834 PF16118.5 NODE_55611_length_309_cov_111.532847_g47676_i0forward_frame_2 - 0.064 14.2 0.0 0.074 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Cys_rich_CPXG PF14255.6 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.00096 19.0 11.2 0.35 10.8 0.5 3.2 3 0 0 3 3 3 3 Cysteine-rich CPXCG RMI1_N PF08585.12 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.014 15.2 0.0 5.6 6.7 0.0 2.5 1 1 2 3 3 3 0 RecQ mediated genome instability protein Fer4_12 PF13353.6 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.13 12.5 4.2 37 4.6 0.1 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain DUF2367 PF10164.9 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.15 12.5 4.0 5.8 7.5 0.1 2.7 1 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2367) Toxin_5 PF05294.13 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 0.43 11.0 13.0 11 6.6 0.4 3.2 3 0 0 3 3 3 0 Scorpion short toxin Zn_ribbon_SprT PF17283.2 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_3 - 7.9 6.5 15.5 16 5.5 0.9 3.1 3 0 0 3 3 3 0 SprT-like zinc ribbon domain PCSK9_C3 PF18463.1 NODE_55604_length_309_cov_151.091241_g47669_i0reverse_frame_2 - 0.028 14.7 3.2 0.086 13.1 3.2 1.8 1 1 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Suppressor_APC PF11414.8 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_3 - 1.4 9.0 5.5 20 5.3 0.3 2.9 1 1 2 3 3 3 0 Adenomatous polyposis coli tumour suppressor protein Stonin2_N PF12016.8 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_3 - 3.4 7.0 7.0 1.4 8.3 1.8 1.9 1 1 1 2 2 2 0 Stonin 2 MOLO1 PF17175.4 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_2 - 0.00038 20.6 2.4 2.2 8.4 0.1 3.0 3 0 0 3 3 3 3 Modulator of levamisole receptor-1 Nuc_deoxyri_tr2 PF15891.5 NODE_55604_length_309_cov_151.091241_g47669_i0forward_frame_2 - 0.6 10.4 2.6 24 5.3 0.2 2.8 1 1 2 3 3 3 0 Nucleoside 2-deoxyribosyltransferase like DUF2213 PF09979.9 NODE_55603_length_309_cov_176.372263_g47668_i0reverse_frame_2 - 0.0015 18.5 0.2 0.0018 18.3 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2213) Ndc1_Nup PF09531.10 NODE_55603_length_309_cov_176.372263_g47668_i0forward_frame_2 - 2.1 7.0 10.6 2.2 6.9 10.6 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup cEGF PF12662.7 NODE_55597_length_309_cov_337.777372_g47662_i0forward_frame_2 - 0.091 12.7 0.5 0.091 12.7 0.5 2.3 2 0 0 2 2 2 0 Complement Clr-like EGF-like RNA_pol_Rpc4 PF05132.14 NODE_55595_length_309_cov_462.751825_g47660_i0forward_frame_3 - 0.69 10.3 8.1 0.79 10.1 8.1 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 RR_TM4-6 PF06459.12 NODE_55595_length_309_cov_462.751825_g47660_i0forward_frame_3 - 2.4 7.9 10.9 2.9 7.7 10.9 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 NODE_55595_length_309_cov_462.751825_g47660_i0forward_frame_3 - 6.9 5.3 7.8 7.2 5.3 7.8 1.0 1 0 0 1 1 1 0 Presenilin CRAM_rpt PF07016.11 NODE_55595_length_309_cov_462.751825_g47660_i0forward_frame_2 - 2.5 8.0 9.2 16 5.5 0.3 2.8 2 1 0 2 2 2 0 Cysteine-rich acidic integral membrane protein precursor CBP_BcsG PF11658.8 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.0035 15.8 0.1 0.004 15.6 0.1 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG OmpH PF03938.14 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.016 15.6 7.0 0.022 15.1 7.0 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) ETRAMP PF09716.10 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.037 14.1 12.5 1.2 9.3 12.5 2.1 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF4446 PF14584.6 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.041 13.9 3.0 0.052 13.5 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) PSI_PsaF PF02507.15 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.073 12.9 0.2 0.085 12.7 0.2 1.1 1 0 0 1 1 1 0 Photosystem I reaction centre subunit III DUF883 PF05957.13 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.21 12.2 1.9 0.29 11.8 1.9 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) EMC3_TMCO1 PF01956.16 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 0.7 9.6 3.8 0.91 9.2 3.8 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like OAD_gamma PF04277.13 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 2.5 8.7 6.4 7.3 7.3 6.4 1.7 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain TMPIT PF07851.13 NODE_55592_length_309_cov_8961.631387_g47657_i0reverse_frame_2 - 3.4 6.8 6.7 3 7.0 5.9 1.3 1 1 0 1 1 1 0 TMPIT-like protein TMEM43 PF07787.12 NODE_55592_length_309_cov_8961.631387_g47657_i0forward_frame_2 - 1.2 8.4 3.7 1.5 8.1 3.7 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 DHHC PF01529.20 ORF99692 - 3.9 7.6 6.7 5 7.2 6.7 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase amfpi-1 PF12190.8 ORF99665 - 0.94 10.1 7.5 8.4 7.1 0.3 2.1 2 0 0 2 2 2 0 Fungal protease inhibitor TatC PF00902.18 ORF99098 - 0.18 11.6 10.4 0.21 11.4 10.4 1.2 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) TNFR_16_TM PF18422.1 ORF99098 - 1.6 8.8 9.3 8.9 6.4 2.1 2.7 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain MCRS_N PF13325.6 ORF98744 - 0.15 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 N-terminal region of micro-spherule protein MMPL PF03176.15 ORF98625 - 0.13 11.2 3.0 0.13 11.2 3.0 1.1 1 0 0 1 1 1 0 MMPL family vMSA PF00695.19 ORF98520 - 0.11 11.6 2.0 0.11 11.6 2.0 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Meckelin PF09773.9 ORF9851 - 0.41 8.7 7.9 0.5 8.4 7.9 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) zf-UBP PF02148.19 ORF98408 - 0.039 14.3 9.9 0.058 13.7 9.9 1.4 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein P120R PF08062.11 ORF97733 - 3.4 8.1 10.2 15 6.1 0.4 3.3 2 1 0 2 2 2 0 P120R (NUC006) repeat Neur_chan_memb PF02932.16 ORF97733 - 8.4 6.4 7.0 9 6.3 7.0 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Ank_5 PF13857.6 ORF9755 - 0.00032 20.9 0.0 0.00066 19.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF9755 - 0.00068 20.2 0.0 0.0014 19.2 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF9755 - 0.069 13.8 0.0 0.085 13.5 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) PorA PF11271.8 ORF97525 - 0.082 12.2 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 Porin PorA BLI1 PF17324.2 ORF97525 - 0.32 11.7 9.2 1.4 9.6 9.2 1.8 1 1 0 1 1 1 0 BLOC-1 interactor 1 SBP_bac_3 PF00497.20 ORF95388 - 1.4e-09 37.7 0.0 1.7e-09 37.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Bcr-Abl_Oligo PF09036.10 ORF95145 - 1.1 9.3 3.8 3.3 7.8 0.3 2.1 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain IBR PF01485.21 ORF95051 - 2.8e-10 40.3 15.1 3.9e-10 39.8 15.1 1.4 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain zf-RING_4 PF14570.6 ORF95051 - 0.096 12.5 14.9 1.4 8.8 0.2 2.4 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Tap-RNA_bind PF09162.10 ORF93666 - 0.019 14.8 0.3 0.019 14.8 0.3 1.9 2 0 0 2 2 2 0 Tap, RNA-binding DUF3801 PF12687.7 ORF93666 - 0.045 13.8 0.2 0.068 13.2 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3801) DPM3 PF08285.11 ORF92050 - 1.5e-17 63.6 0.1 1.7e-17 63.4 0.1 1.1 1 0 0 1 1 1 1 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Brr6_like_C_C PF10104.9 ORF92050 - 0.43 10.4 3.4 9.3 6.0 0.1 2.1 1 1 1 2 2 2 0 Di-sulfide bridge nucleocytoplasmic transport domain Kelch_1 PF01344.25 ORF91904 - 3.2e-08 33.0 4.6 2.6e-05 23.7 0.4 2.5 2 1 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 ORF91904 - 3.7e-08 33.2 0.1 0.01 15.8 0.0 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF91904 - 8.6e-07 29.0 0.7 2e-05 24.7 0.1 2.2 1 1 1 2 2 2 1 Kelch motif Kelch_3 PF13415.6 ORF91904 - 0.0035 17.6 0.0 0.037 14.3 0.0 2.0 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF91904 - 0.015 15.2 0.2 0.27 11.3 0.0 2.4 2 1 0 2 2 2 0 Kelch motif Mfa2 PF08842.10 ORF91363 - 0.025 14.2 0.5 0.025 14.2 0.5 1.0 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 Amidohydro_3 PF07969.11 ORF90695 - 1.2e-06 28.3 0.0 1.4e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family zf-C2H2_11 PF16622.5 ORF90530 - 0.026 14.3 2.6 0.68 9.7 0.2 2.4 2 0 0 2 2 2 0 zinc-finger C2H2-type Toxin_28 PF08115.11 ORF90238 - 0.033 14.1 0.1 0.061 13.2 0.1 1.4 1 0 0 1 1 1 0 SFI toxin family DUF3136 PF11334.8 ORF89903 - 0.059 13.2 0.1 0.11 12.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) NupH_GANP PF16768.5 ORF89133 - 0.055 13.2 7.5 0.2 11.3 1.3 2.0 2 0 0 2 2 2 0 Nucleoporin homology of Germinal-centre associated nuclear protein Herpes_UL6 PF01763.16 ORF88101 - 0.0056 15.3 1.7 0.0062 15.1 1.7 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like Pox_polyA_pol_N PF12630.7 ORF88101 - 0.099 13.0 3.0 0.15 12.4 3.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain MMS22L_N PF14910.6 ORF8695 - 0.087 11.3 0.0 0.098 11.1 0.0 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal UME PF08064.13 ORF86657 - 0.024 14.6 0.7 0.032 14.1 0.7 1.3 1 1 0 1 1 1 0 UME (NUC010) domain DUF4885 PF16226.5 ORF85898 - 0.0059 15.7 0.3 0.0073 15.4 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4885) EF_assoc_1 PF08355.12 ORF85336 - 0.0059 16.2 0.1 0.0063 16.1 0.1 1.3 1 1 0 1 1 1 1 EF hand associated E_Pc_C PF06752.12 ORF85256 - 0.86 9.7 7.3 0.95 9.5 7.3 1.0 1 0 0 1 1 1 0 Enhancer of Polycomb C-terminus TMEM240 PF15207.6 ORF85037 - 0.033 13.9 0.4 0.033 13.9 0.4 1.1 1 0 0 1 1 1 0 TMEM240 family DAP10 PF07213.11 ORF84903 - 0.0064 16.4 0.1 0.012 15.6 0.1 1.6 1 0 0 1 1 1 1 DAP10 membrane protein Glutaredoxin PF00462.24 ORF84364 - 0.18 12.0 0.5 0.18 12.0 0.5 1.7 2 0 0 2 2 2 0 Glutaredoxin Defensin_3 PF08131.11 ORF83982 - 0.014 15.5 4.0 0.037 14.2 4.0 1.7 1 0 0 1 1 1 0 Defensin-like peptide family Ribosomal_L37ae PF01780.19 ORF82766 - 1.8e-34 117.6 10.3 2.2e-34 117.4 10.3 1.1 1 0 0 1 1 1 1 Ribosomal L37ae protein family zf-HC5HC2H PF13771.6 ORF82766 - 0.00087 19.5 0.8 0.00097 19.3 0.8 1.2 1 0 0 1 1 1 1 PHD-like zinc-binding domain CEBP_ZZ PF16366.5 ORF82766 - 0.021 15.1 0.7 0.033 14.4 0.7 1.3 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-RING_13 PF17977.1 ORF82766 - 0.055 13.6 3.2 0.079 13.1 3.2 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 ORF82766 - 0.7 9.9 5.6 2.4 8.2 1.0 2.0 1 1 1 2 2 2 0 Transposase zinc-ribbon domain CSD PF00313.22 ORF82156 - 1.5e-05 24.7 0.1 4.5e-05 23.2 0.1 1.7 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain CusF_Ec PF11604.8 ORF82156 - 0.0069 16.3 0.0 0.037 14.0 0.0 2.0 1 1 0 1 1 1 1 Copper binding periplasmic protein CusF Toxin-deaminase PF14424.6 ORF82057 - 0.0032 17.6 0.2 0.005 16.9 0.2 1.3 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases LysR_substrate PF03466.20 ORF82057 - 0.054 12.9 0.0 0.063 12.6 0.0 1.1 1 0 0 1 1 1 0 LysR substrate binding domain OAD_gamma PF04277.13 ORF81364 - 2.8 8.6 7.3 1.6 9.4 5.3 1.6 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Nrap_D2 PF17403.2 ORF80363 - 0.027 14.3 0.9 0.029 14.1 0.9 1.1 1 0 0 1 1 1 0 Nrap protein PAP/OAS-like domain NUMOD1 PF07453.13 ORF78969 - 0.034 14.4 0.2 0.054 13.8 0.2 1.3 1 0 0 1 1 1 0 NUMOD1 domain Catalase-rel PF06628.12 ORF78701 - 0.14 12.4 0.0 0.31 11.3 0.0 1.5 1 0 0 1 1 1 0 Catalase-related immune-responsive SUZ PF12752.7 ORF77802 - 0.17 12.7 0.0 0.24 12.2 0.0 1.4 1 0 0 1 1 1 0 SUZ domain Ank_5 PF13857.6 ORF77515 - 0.062 13.6 0.0 0.099 13.0 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Lipid_bd PF12888.7 ORF77105 - 0.049 14.1 0.0 0.084 13.3 0.0 1.3 1 0 0 1 1 1 0 Lipid-binding putative hydrolase DUF3446 PF11928.8 ORF76588 - 1.5 9.2 7.8 1.9 8.8 7.6 1.4 1 1 0 1 1 1 0 Early growth response N-terminal domain Mif2_N PF15624.6 ORF76225 - 0.011 16.4 9.2 0.013 16.2 9.2 1.1 1 0 0 1 1 1 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal TM231 PF10149.9 ORF75861 - 0.025 13.9 1.1 0.026 13.8 1.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 MORN PF02493.20 ORF7472 - 5.1e-20 70.1 32.9 1.4e-05 24.7 2.9 5.1 5 0 0 5 5 5 5 MORN repeat DUF1315 PF07023.12 ORF7472 - 0.38 10.9 3.6 1.1 9.4 0.7 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1315) PG_binding_2 PF08823.11 ORF7472 - 0.74 10.2 3.5 19 5.6 0.1 2.3 1 1 1 2 2 2 0 Putative peptidoglycan binding domain Tudor_2 PF18104.1 ORF7472 - 1.4 8.7 10.9 3.4 7.4 0.3 3.9 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain DUF604 PF04646.12 ORF73235 - 0.015 14.7 3.5 0.016 14.6 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF604 CRF-BP PF05428.11 ORF70543 - 0.092 11.5 0.0 0.097 11.4 0.0 1.0 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) UME PF08064.13 ORF70388 - 0.024 14.6 0.7 0.032 14.1 0.7 1.3 1 1 0 1 1 1 0 UME (NUC010) domain PAP2_3 PF14378.6 ORF68252 - 0.018 14.7 0.3 0.019 14.7 0.3 1.1 1 0 0 1 1 1 0 PAP2 superfamily NUDIX_4 PF14815.6 ORF68252 - 0.079 13.0 0.2 0.11 12.5 0.2 1.3 1 1 0 1 1 1 0 NUDIX domain PRK PF00485.18 ORF66987 - 0.00018 21.3 0.1 0.00019 21.3 0.1 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Syntaxin PF00804.25 ORF66987 - 0.0042 16.8 6.0 0.0056 16.4 5.7 1.4 1 1 0 1 1 1 1 Syntaxin DUF1759 PF03564.15 ORF66987 - 0.0099 15.8 0.7 0.011 15.7 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) SoDot-IcmSS PF16848.5 ORF66987 - 0.022 14.7 3.3 0.031 14.3 3.3 1.2 1 0 0 1 1 1 0 Substrate of the Dot/Icm secretion system, putative Nup84_Nup100 PF04121.13 ORF66987 - 0.026 12.7 3.8 0.03 12.5 3.8 1.0 1 0 0 1 1 1 0 Nuclear pore protein 84 / 107 Colicin_Pyocin PF01320.18 ORF66987 - 0.026 14.6 3.3 0.047 13.8 3.2 1.5 1 1 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein CotJB PF12652.7 ORF66987 - 0.069 13.4 0.3 0.1 12.8 0.3 1.3 1 0 0 1 1 1 0 CotJB protein Med12-LCEWAV PF12145.8 ORF66987 - 0.12 11.2 2.8 0.12 11.2 2.8 1.0 1 0 0 1 1 1 0 Eukaryotic Mediator 12 subunit domain HAD_SAK_1 PF10307.9 ORF66987 - 0.16 11.8 6.3 0.19 11.5 6.3 1.1 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins NAD_binding_5 PF07994.12 ORF66987 - 0.19 11.1 2.3 0.2 11.0 2.3 1.1 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase DUF948 PF06103.11 ORF66987 - 0.2 12.0 2.5 0.35 11.2 1.9 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Atg14 PF10186.9 ORF66987 - 0.86 8.6 6.2 1 8.4 6.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF66987 - 1.1 9.8 6.2 1.6 9.3 6.2 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region PorA PF11271.8 ORF66138 - 0.082 12.2 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 Porin PorA BLI1 PF17324.2 ORF66138 - 0.32 11.7 9.2 1.4 9.6 9.2 1.8 1 1 0 1 1 1 0 BLOC-1 interactor 1 POT1PC PF16686.5 ORF6594 - 0.17 11.7 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 ssDNA-binding domain of telomere protection protein DUF4224 PF13986.6 ORF65835 - 0.048 13.6 0.0 0.082 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4224) Sel1 PF08238.12 ORF64927 - 5.1e-05 23.8 0.0 0.00036 21.1 0.0 2.1 2 0 0 2 2 2 1 Sel1 repeat Trans_reg_C PF00486.28 ORF64927 - 0.0058 16.7 0.0 0.0081 16.2 0.0 1.1 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal ERAP1_C PF11838.8 ORF64927 - 0.063 12.8 0.1 0.066 12.7 0.1 1.1 1 0 0 1 1 1 0 ERAP1-like C-terminal domain ACT_7 PF13840.6 ORF63880 - 0.037 13.8 0.1 0.07 12.9 0.1 1.5 1 0 0 1 1 1 0 ACT domain WD40_3 PF15911.5 ORF63880 - 0.06 13.4 1.8 0.45 10.6 0.3 2.2 1 1 1 2 2 2 0 WD domain, G-beta repeat Bystin PF05291.11 ORF62988 - 0.093 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Bystin FtsL PF04999.13 ORF62870 - 0.18 11.8 0.8 0.22 11.5 0.8 1.3 1 1 0 1 1 1 0 Cell division protein FtsL EF-hand_1 PF00036.32 ORF62121 - 1.1e-15 55.9 3.0 3.7e-07 29.2 0.2 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF62121 - 1.3e-14 54.3 1.3 1.7e-14 54.0 1.3 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF62121 - 1.2e-12 46.7 1.6 4.7e-06 26.1 0.3 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF62121 - 1.7e-11 43.8 1.5 1.5e-05 24.7 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF62121 - 6.3e-10 38.1 3.1 0.00029 20.2 0.4 2.2 2 0 0 2 2 2 2 EF hand EF-hand_9 PF14658.6 ORF62121 - 2.3e-06 27.8 0.0 3.2e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF62121 - 0.037 14.0 0.3 0.08 12.9 0.3 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand Sigma70_r1_1 PF03979.14 ORF62121 - 0.037 14.1 0.9 0.074 13.1 0.6 1.7 1 1 0 1 1 1 0 Sigma-70 factor, region 1.1 p25-alpha PF05517.12 ORF62121 - 0.041 14.1 0.1 0.047 13.8 0.1 1.3 1 0 0 1 1 1 0 p25-alpha SPARC_Ca_bdg PF10591.9 ORF62121 - 0.053 13.8 0.1 0.07 13.5 0.1 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region AnfO_nitrog PF09582.10 ORF61866 - 0.067 12.5 0.8 0.091 12.1 0.8 1.3 1 1 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) OAD_gamma PF04277.13 ORF61529 - 2.8 8.6 7.3 1.6 9.4 5.3 1.6 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Cys_rich_VLP PF14194.6 ORF61276 - 0.1 12.7 2.4 0.22 11.7 2.4 1.6 1 1 0 1 1 1 0 Cysteine-rich VLP PP-binding PF00550.25 ORF61226 - 2.4e-11 43.8 0.0 3e-11 43.5 0.0 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site GPI2 PF06432.11 ORF61212 - 1.9 7.9 10.4 2 7.8 10.4 1.0 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase TetR_C_23 PF17931.1 ORF59912 - 0.095 12.8 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF3845 PF12956.7 ORF57496 - 0.043 13.3 0.0 0.053 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure DUF4710 PF15828.5 ORF56822 - 0.021 14.9 0.8 0.033 14.3 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) Fimbrillin_C PF15495.6 ORF56822 - 0.074 13.5 0.1 0.099 13.1 0.1 1.2 1 0 0 1 1 1 0 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal Surfac_D-trimer PF09006.11 ORF56054 - 0.091 12.7 0.2 0.13 12.2 0.2 1.2 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation APA3_viroporin PF11289.8 ORF56029 - 0.79 9.2 5.6 0.92 9.0 5.6 1.2 1 0 0 1 1 1 0 Coronavirus accessory protein 3a DUF997 PF06196.12 ORF56015 - 1.4e-30 105.1 1.2 1.6e-30 104.9 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF997) CrgA PF06781.12 ORF56015 - 1.1 9.4 5.9 1.5 8.9 0.3 2.1 1 1 1 2 2 2 0 Cell division protein CrgA DUF4212 PF13937.6 ORF56015 - 2 8.9 7.0 7.2 7.1 7.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4212) Thymosin PF01290.20 ORF55923 - 0.06 13.1 1.1 0.06 13.1 1.1 1.7 2 0 0 2 2 2 0 Thymosin beta-4 family DUF3565 PF12088.8 ORF54815 - 0.0033 17.3 2.1 0.018 14.9 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3565) Lenti_VIF_2 PF07401.12 ORF53064 - 0.027 13.8 0.5 0.029 13.7 0.5 1.1 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein APG12 PF04110.13 ORF52857 - 8.2e-15 55.0 0.0 9e-15 54.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Atg8 PF02991.16 ORF52857 - 0.00018 21.7 0.0 0.00019 21.6 0.0 1.1 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like Albumin_I PF08027.11 ORF52490 - 1 9.0 5.7 14 5.4 0.1 2.3 2 0 0 2 2 2 0 Albumin I chain b DUF234 PF03008.14 ORF52063 - 0.0051 17.2 1.7 0.0073 16.7 1.7 1.3 1 0 0 1 1 1 1 Archaea bacterial proteins of unknown function FrhB_FdhB_C PF04432.13 ORF52063 - 0.0083 16.0 1.2 0.0095 15.8 1.2 1.2 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus NR_Repeat PF14046.6 ORF50482 - 0.075 13.2 5.1 0.41 10.8 0.0 2.5 2 1 0 2 2 2 0 Nuclear receptor repeat Herpes_UL6 PF01763.16 ORF50011 - 0.0056 15.3 1.7 0.0062 15.1 1.7 1.0 1 0 0 1 1 1 1 Herpesvirus UL6 like Pox_polyA_pol_N PF12630.7 ORF50011 - 0.099 13.0 3.0 0.15 12.4 3.0 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain MmgE_PrpD PF03972.14 ORF49879 - 0.11 11.0 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 MmgE/PrpD family Aldo_ket_red PF00248.21 ORF49274 - 0.0063 15.7 0.0 0.0068 15.6 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family CW_binding_2 PF04122.12 ORF49274 - 0.068 13.8 0.4 0.11 13.2 0.4 1.3 1 1 0 1 1 1 0 Putative cell wall binding repeat 2 DUF2755 PF10954.8 ORF49124 - 9.1e-50 166.7 0.2 1e-49 166.6 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2755) DUF2062 PF09835.9 ORF49124 - 0.016 15.1 1.0 0.016 15.1 1.0 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Ion_trans PF00520.31 ORF49124 - 0.051 12.8 0.4 0.15 11.2 0.1 1.7 2 0 0 2 2 2 0 Ion transport protein LapA_dom PF06305.11 ORF49124 - 0.44 10.4 4.3 0.61 9.9 1.1 2.1 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain HemY_N PF07219.13 ORF49124 - 0.71 10.1 3.8 4.7 7.4 0.0 2.1 1 1 1 2 2 2 0 HemY protein N-terminus TM_helix PF05552.12 ORF49124 - 1.6 8.8 7.8 13 5.9 0.1 2.1 2 0 0 2 2 2 0 Conserved TM helix HOCHOB PF17943.1 ORF48458 - 0.079 13.7 0.0 0.11 13.2 0.0 1.2 1 0 0 1 1 1 0 Homeobox-cysteine loop-homeobox T6SS_VasE PF05936.12 ORF48078 - 0.04 12.6 0.1 0.053 12.2 0.1 1.0 1 0 0 1 1 1 0 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE SLR1-BP PF07333.12 ORF47906 - 0.0059 17.0 1.1 0.009 16.4 1.1 1.3 1 0 0 1 1 1 1 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) SIT PF15330.6 ORF45334 - 0.02 15.4 0.8 0.025 15.0 0.8 1.4 1 1 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT zf-LITAF-like PF10601.9 ORF44728 - 0.00021 21.5 13.9 0.0021 18.3 13.9 2.0 1 1 0 1 1 1 1 LITAF-like zinc ribbon domain DUF4187 PF13821.6 ORF44728 - 0.046 13.5 0.9 0.1 12.4 0.9 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) Tmemb_9 PF05434.11 ORF44728 - 1.3 8.9 5.4 1.7 8.5 5.4 1.2 1 0 0 1 1 1 0 TMEM9 Polyoma_lg_T_C PF06431.11 ORF44680 - 0.081 11.8 0.0 0.1 11.5 0.0 1.0 1 0 0 1 1 1 0 Polyomavirus large T antigen C-terminus DUF3039 PF11238.8 ORF44612 - 0.89 9.4 3.2 1.5 8.7 3.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3039) Ilar_coat PF01787.16 ORF44389 - 0.12 12.2 1.0 0.15 11.8 0.3 1.4 2 0 0 2 2 2 0 Ilarvirus coat protein CRT-like PF08627.10 ORF44371 - 9e-06 24.9 0.0 1.1e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like DUF4787 PF16029.5 ORF44176 - 0.76 9.9 4.3 12 6.0 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4787) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks261.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks261.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks261.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks261.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF594 PF04578.13 ORF43461 - 0.021 14.4 0.1 0.035 13.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF594 Vps36-NZF-N PF16988.5 ORF4170 - 1.5 8.2 8.3 23 4.5 1.6 3.1 2 1 1 3 3 3 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain SURF2 PF05477.11 ORF40934 - 0.24 11.1 2.2 0.29 10.8 2.2 1.2 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) Toxin_YhaV PF11663.8 ORF40655 - 1.5e-14 54.2 0.0 2.2e-14 53.6 0.0 1.3 1 0 0 1 1 1 1 Toxin with endonuclease activity, of toxin-antitoxin system Flexi_CP PF00286.20 ORF40655 - 0.03 14.2 0.1 0.044 13.7 0.1 1.3 1 0 0 1 1 1 0 Viral coat protein Bromodomain PF00439.25 ORF40585 - 5.1e-08 32.9 0.5 7.4e-08 32.4 0.5 1.4 1 1 0 1 1 1 1 Bromodomain MTA_R1 PF17226.2 ORF40397 - 0.07 13.3 0.7 0.12 12.5 0.7 1.7 1 1 0 1 1 1 0 MTA R1 domain UPF0061 PF02696.14 ORF40397 - 0.15 10.8 0.7 0.17 10.7 0.7 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family GerA PF03323.13 ORF39853 - 0.1 11.0 0.4 0.1 11.1 0.4 1.0 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein Med25_NR-box PF11244.8 ORF39301 - 0.12 12.8 0.1 0.2 12.1 0.1 1.4 1 1 0 1 1 1 0 Mediator complex subunit 25 C-terminal NR box-containing Ketoacyl-synt_2 PF13723.6 ORF38812 - 0.055 13.1 0.5 0.065 12.9 0.5 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain IGFL PF14653.6 ORF38447 - 0.16 11.9 4.0 0.34 10.9 4.0 1.5 1 1 0 1 1 1 0 Insulin growth factor-like family Porphobil_deam PF01379.20 ORF3542 - 0.18 11.3 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain RNB PF00773.19 ORF34057 - 0.11 11.8 1.7 0.13 11.5 0.7 1.5 1 1 1 2 2 2 0 RNB domain zf-C5HC2 PF02928.16 ORF33204 - 0.0024 18.2 4.2 0.0037 17.6 3.6 1.7 1 1 0 1 1 1 1 C5HC2 zinc finger CDC4_D PF16856.5 ORF33204 - 0.041 13.8 0.2 0.06 13.2 0.2 1.2 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain GCR PF02155.15 ORF3295 - 0.96 8.4 3.9 0.99 8.4 0.6 1.9 1 1 1 2 2 2 0 Glucocorticoid receptor CDCA PF18484.1 ORF32564 - 0.18 11.7 0.1 1.9 8.3 0.1 2.0 1 1 1 2 2 2 0 Cadmium carbonic anhydrase repeat DUF5325 PF17259.2 ORF32173 - 0.24 11.3 3.5 0.48 10.3 3.5 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5325) DUF3446 PF11928.8 ORF32102 - 1.5 9.2 7.8 1.9 8.8 7.6 1.4 1 1 0 1 1 1 0 Early growth response N-terminal domain PDCD2_C PF04194.13 ORF32066 - 0.09 12.9 0.7 0.087 12.9 0.7 1.0 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain GASA PF02704.14 ORF30615 - 0.11 12.7 0.7 0.18 12.0 0.7 1.5 1 1 0 1 1 1 0 Gibberellin regulated protein DREV PF05219.12 ORF3001 - 0.013 14.7 0.3 0.014 14.5 0.3 1.0 1 0 0 1 1 1 0 DREV methyltransferase Apq12 PF12716.7 ORF3001 - 0.014 15.4 2.4 0.021 14.8 2.4 1.3 1 0 0 1 1 1 0 Nuclear pore assembly and biogenesis DUF3672 PF12421.8 ORF3001 - 0.1 12.5 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Fibronectin type III protein PDR_CDR PF06422.12 ORF3001 - 0.22 11.5 3.4 0.52 10.2 3.4 1.8 1 1 0 1 1 1 0 CDR ABC transporter GIT_CC PF16559.5 ORF28963 - 0.0048 16.7 1.6 0.0069 16.2 1.6 1.3 1 0 0 1 1 1 1 GIT coiled-coil Rho guanine nucleotide exchange factor EURL PF06937.11 ORF28963 - 0.007 15.8 0.9 0.0077 15.7 0.9 1.0 1 0 0 1 1 1 1 EURL protein Adaptin_binding PF10199.9 ORF28963 - 0.062 13.9 3.3 0.073 13.7 3.3 1.1 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 ATG16 PF08614.11 ORF28963 - 0.1 12.8 6.4 0.12 12.5 6.4 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF3450 PF11932.8 ORF28963 - 0.21 10.9 4.6 0.23 10.7 4.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) FWWh PF14922.6 ORF28391 - 0.77 9.7 4.0 0.29 11.1 0.8 1.8 1 1 1 2 2 2 0 Protein of unknown function Glyco_trans_4_4 PF13579.6 ORF27945 - 0.017 15.5 2.1 0.021 15.3 2.1 1.0 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain SIX1_SD PF16878.5 ORF27732 - 0.14 12.6 0.4 0.18 12.3 0.4 1.1 1 0 0 1 1 1 0 Transcriptional regulator, SIX1, N-terminal SD domain PHD_4 PF16866.5 ORF27671 - 0.021 14.9 2.0 0.025 14.6 1.3 1.5 1 1 0 1 1 1 0 PHD-finger YbgS PF13985.6 ORF27671 - 0.28 11.5 4.1 0.33 11.2 4.1 1.2 1 0 0 1 1 1 0 YbgS-like protein MT PF12777.7 ORF26241 - 0.00021 20.5 0.0 0.00022 20.4 0.0 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor MTA_R1 PF17226.2 ORF25617 - 0.07 13.3 0.7 0.12 12.5 0.7 1.7 1 1 0 1 1 1 0 MTA R1 domain UPF0061 PF02696.14 ORF25617 - 0.15 10.8 0.7 0.17 10.7 0.7 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family Ferlin_C PF16165.5 ORF24814 - 0.13 12.2 3.3 0.14 12.1 3.3 1.2 1 0 0 1 1 1 0 Ferlin C-terminus CSRNP_N PF16019.5 ORF24814 - 0.31 10.9 7.1 0.35 10.8 7.1 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus PRK PF00485.18 ORF23881 - 0.00031 20.5 0.1 0.00032 20.5 0.1 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Syntaxin PF00804.25 ORF23881 - 0.0028 17.4 6.2 0.0039 16.9 5.1 1.7 1 1 1 2 2 2 2 Syntaxin DUF1759 PF03564.15 ORF23881 - 0.0096 15.9 0.6 0.012 15.5 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) Nup84_Nup100 PF04121.13 ORF23881 - 0.014 13.5 3.1 0.016 13.3 3.1 1.0 1 0 0 1 1 1 0 Nuclear pore protein 84 / 107 Adenine_glyco PF03352.13 ORF23881 - 0.042 13.6 1.9 0.048 13.4 1.9 1.1 1 0 0 1 1 1 0 Methyladenine glycosylase CotJB PF12652.7 ORF23881 - 0.063 13.5 0.4 0.097 12.9 0.4 1.3 1 0 0 1 1 1 0 CotJB protein Colicin_Pyocin PF01320.18 ORF23881 - 0.11 12.7 4.0 0.19 11.8 4.0 1.5 1 1 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein DUF948 PF06103.11 ORF23881 - 0.18 12.1 2.8 0.33 11.2 2.2 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) HAD_SAK_1 PF10307.9 ORF23881 - 0.33 10.7 6.8 0.4 10.5 6.8 1.1 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins Atg14 PF10186.9 ORF23881 - 0.86 8.6 6.2 0.98 8.4 6.2 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF23881 - 0.95 10.0 6.2 1.4 9.4 6.2 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF2650 PF10853.8 ORF2295 - 6.7 6.5 8.2 9.6 6.0 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2650) MORN PF02493.20 ORF21100 - 2.1e-06 27.3 15.8 0.0017 18.1 1.2 3.6 4 0 0 4 4 4 3 MORN repeat SHIPPO-rpt PF07004.12 ORF20888 - 0.11 13.5 0.1 1 10.4 0.0 2.3 2 1 0 2 2 2 0 Sperm-tail PG-rich repeat MORN PF02493.20 ORF20025 - 9e-06 25.3 11.6 0.026 14.4 2.7 3.7 3 1 0 3 3 3 2 MORN repeat STT3 PF02516.14 ORF20025 - 0.23 10.4 0.0 0.25 10.2 0.0 1.1 1 0 0 1 1 1 0 Oligosaccharyl transferase STT3 subunit vMSA PF00695.19 ORF19165 - 0.32 10.1 4.4 0.3 10.1 4.4 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF3136 PF11334.8 ORF18420 - 0.06 13.1 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) DUF2508 PF10704.9 ORF17053 - 0.094 12.9 2.2 0.16 12.1 2.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2508) Haem_bd PF14376.6 ORF17053 - 0.13 12.2 0.7 0.18 11.7 0.1 1.6 2 0 0 2 2 2 0 Haem-binding domain DUF2207 PF09972.9 ORF17053 - 0.15 10.8 1.9 0.17 10.6 1.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PorA PF11271.8 ORF16834 - 0.072 12.4 0.1 0.09 12.1 0.1 1.1 1 0 0 1 1 1 0 Porin PorA BLI1 PF17324.2 ORF16834 - 0.31 11.7 9.2 1.4 9.6 9.2 1.9 1 1 0 1 1 1 0 BLOC-1 interactor 1 zf-TFIIIC PF12660.7 ORF16571 - 0.1 12.5 1.7 0.12 12.4 1.7 1.2 1 0 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex DUF1442 PF07279.11 ORF15570 - 0.091 12.1 0.0 0.096 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1442) SWIRM PF04433.17 ORF152669 - 0.00013 22.2 0.1 0.00018 21.8 0.1 1.1 1 0 0 1 1 1 1 SWIRM domain CRM1_repeat_2 PF18784.1 ORF152669 - 0.0019 17.8 1.8 1.1 8.9 0.1 2.4 2 0 0 2 2 2 2 CRM1 / Exportin repeat 2 NusG_add PF18298.1 ORF152669 - 0.011 15.9 1.1 0.015 15.5 1.1 1.1 1 0 0 1 1 1 0 NusG additional domain Toxin_28 PF08115.11 ORF151404 - 0.033 14.1 0.1 0.061 13.2 0.1 1.4 1 0 0 1 1 1 0 SFI toxin family NICE-1 PF15845.5 ORF151115 - 0.0027 18.5 4.6 0.003 18.3 4.6 1.1 1 0 0 1 1 1 1 Cysteine-rich C-terminal 1 family DUF2508 PF10704.9 ORF149346 - 0.046 13.9 1.2 0.082 13.1 1.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2508) DUF2207 PF09972.9 ORF149346 - 0.12 11.1 1.5 0.14 10.9 1.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Haem_bd PF14376.6 ORF149346 - 0.15 12.0 0.7 0.18 11.7 0.1 1.5 2 0 0 2 2 2 0 Haem-binding domain DAO PF01266.24 ORF149299 - 5.6e-11 42.6 0.0 6.6e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 ORF149299 - 2.5e-05 23.6 0.0 3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 ORF149299 - 0.0045 16.1 0.0 0.0045 16.1 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 ORF149299 - 0.0093 16.2 0.0 0.013 15.8 0.0 1.3 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 ORF149299 - 0.036 13.2 0.0 0.05 12.7 0.0 1.2 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 ORF149299 - 0.045 12.8 0.0 0.082 11.9 0.0 1.3 1 1 0 1 1 1 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 ORF149299 - 0.049 13.6 0.0 0.12 12.4 0.0 1.6 1 1 0 1 1 1 0 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF149299 - 0.066 11.9 0.0 0.066 11.9 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein Pyr_redox_2 PF07992.14 ORF149299 - 0.14 11.3 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 ORF149299 - 0.16 12.3 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Arteri_Gl PF00951.18 ORF148831 - 2.4 7.9 6.2 2.7 7.8 6.2 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein p25-alpha PF05517.12 ORF148624 - 0.04 14.1 0.0 0.051 13.7 0.0 1.2 1 0 0 1 1 1 0 p25-alpha Rpr2 PF04032.16 ORF148617 - 1.5 9.1 7.9 0.46 10.8 3.2 2.1 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain THEG PF14912.6 ORF148453 - 0.12 12.9 0.1 0.2 12.1 0.1 1.3 1 0 0 1 1 1 0 Testicular haploid expressed repeat Acyltransferase PF01553.21 ORF147111 - 8.6e-11 41.6 0.1 1.3e-10 41.0 0.1 1.3 1 0 0 1 1 1 1 Acyltransferase DUF4191 PF13829.6 ORF147111 - 0.087 12.2 0.0 0.092 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Bromodomain PF00439.25 ORF146822 - 5.1e-08 32.9 0.5 7.4e-08 32.4 0.5 1.4 1 1 0 1 1 1 1 Bromodomain Histone_H2A_C PF16211.5 ORF146645 - 0.21 11.4 0.1 0.38 10.5 0.1 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A ZZ PF00569.17 ORF146269 - 0.63 9.9 13.6 0.55 10.1 5.6 2.7 1 1 1 2 2 2 0 Zinc finger, ZZ type amfpi-1 PF12190.8 ORF145839 - 0.94 10.1 7.5 8.4 7.1 0.3 2.1 2 0 0 2 2 2 0 Fungal protease inhibitor TetR_C_23 PF17931.1 ORF144523 - 0.095 12.8 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Peptidase_S10 PF00450.22 ORF143204 - 0.0083 15.6 0.0 0.0095 15.4 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Orthopox_F6 PF06601.12 ORF143204 - 0.21 11.8 1.9 0.3 11.3 1.2 1.8 1 1 0 1 1 1 0 Orthopoxvirus F6 protein ADD_DNMT3 PF17980.1 ORF142814 - 0.048 13.7 0.5 0.092 12.8 0.5 1.5 1 0 0 1 1 1 0 Cysteine rich ADD domain in DNMT3 DUF2065 PF09838.9 ORF142617 - 6.6e-21 74.1 3.3 8.7e-21 73.7 3.3 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2065) DUF4345 PF14248.6 ORF142617 - 0.0068 16.3 0.2 0.008 16.1 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4345) CSTF2_hinge PF14327.6 ORF142617 - 0.042 14.3 0.0 0.094 13.2 0.0 1.6 1 0 0 1 1 1 0 Hinge domain of cleavage stimulation factor subunit 2 zf-TFIIIC PF12660.7 ORF141850 - 0.1 12.5 1.7 0.12 12.4 1.7 1.2 1 0 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex DiS_P_DiS PF06750.13 ORF141765 - 0.85 9.8 6.7 0.078 13.1 1.7 1.7 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain Ank_5 PF13857.6 ORF141125 - 0.00091 19.5 0.3 0.0017 18.6 0.3 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF141125 - 0.00097 19.7 0.0 0.0023 18.5 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF141125 - 0.0036 17.8 0.1 0.015 15.9 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Pex14_N PF04695.13 ORF141121 - 0.32 11.6 4.8 0.41 11.3 4.8 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region YlaC PF10777.9 ORF141056 - 0.023 14.6 0.7 0.023 14.5 0.7 1.3 1 0 0 1 1 1 0 Inner membrane protein YlaC Ins_beta PF03488.14 ORF140003 - 0.1 12.7 0.4 0.89 9.6 0.0 2.2 2 0 0 2 2 2 0 Nematode insulin-related peptide beta type Gly_radical PF01228.21 ORF140003 - 0.11 13.1 0.1 0.28 11.7 0.1 1.8 1 1 0 1 1 1 0 Glycine radical DUF3932 PF13068.6 ORF139726 - 0.046 14.0 0.6 0.075 13.3 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3932) zf-LITAF-like PF10601.9 ORF137506 - 0.00021 21.5 13.9 0.0021 18.3 13.9 2.0 1 1 0 1 1 1 1 LITAF-like zinc ribbon domain DUF4187 PF13821.6 ORF137506 - 0.046 13.5 0.9 0.1 12.4 0.9 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) Tmemb_9 PF05434.11 ORF137506 - 1.3 8.9 5.4 1.7 8.5 5.4 1.2 1 0 0 1 1 1 0 TMEM9 Pkinase PF00069.25 ORF137486 - 2.4e-08 33.7 0.1 2.8e-08 33.4 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF137486 - 2.4e-05 23.8 0.0 2.9e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2251 PF10008.9 ORF137486 - 0.079 13.1 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2251) DUF4355 PF14265.6 ORF135886 - 0.034 14.4 3.0 0.038 14.2 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4355) FANCI_S1-cap PF14674.6 ORF134336 - 0.12 12.5 0.3 0.54 10.4 0.1 1.9 2 0 0 2 2 2 0 FANCI solenoid 1 cap ABC_tran PF00005.27 ORF134080 - 9e-08 32.7 0.1 2.1e-07 31.6 0.1 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF134080 - 0.00011 21.7 0.5 0.00014 21.4 0.5 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Baculo_LEF-10 PF07206.11 ORF133528 - 0.12 12.6 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 Baculovirus late expression factor 10 (LEF-10) TM231 PF10149.9 ORF132332 - 0.025 13.9 1.1 0.026 13.8 1.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 DUF1097 PF06496.11 ORF131770 - 0.068 13.3 1.1 0.079 13.1 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1097) Myticin-prepro PF10690.9 ORF131275 - 0.012 15.9 0.4 0.019 15.2 0.4 1.3 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Alpha_E3_glycop PF01563.16 ORF131275 - 3.5 7.8 6.3 6.3 7.0 0.3 2.3 2 0 0 2 2 2 0 Alphavirus E3 glycoprotein NICE-1 PF15845.5 ORF130963 - 0.0027 18.5 4.6 0.003 18.3 4.6 1.1 1 0 0 1 1 1 1 Cysteine-rich C-terminal 1 family Guanylate_cyc_2 PF09778.9 ORF130233 - 0.14 11.5 1.7 0.2 11.0 1.7 1.4 1 1 0 1 1 1 0 Guanylylate cyclase DUF4286 PF14114.6 ORF129296 - 0.06 13.8 0.0 0.076 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4286) dCMP_cyt_deam_1 PF00383.23 ORF128851 - 2.2e-08 33.9 0.0 2.7e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 ORF128851 - 6.1e-07 29.3 0.0 7.7e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase Ribosomal_L27_C PF18471.1 ORF128851 - 0.046 13.1 2.2 0.051 13.0 1.0 1.6 2 0 0 2 2 2 0 Ribosomal L27 protein C-terminal domain DUF4499 PF14934.6 ORF128642 - 0.037 14.4 1.5 0.046 14.0 0.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4499) DUF3017 PF11222.8 ORF128359 - 0.062 13.6 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3017) P120R PF08062.11 ORF127941 - 3.4 8.1 10.2 15 6.1 0.4 3.3 2 1 0 2 2 2 0 P120R (NUC006) repeat Neur_chan_memb PF02932.16 ORF127941 - 8.4 6.4 7.0 9 6.3 7.0 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region amfpi-1 PF12190.8 ORF124586 - 0.94 10.1 7.5 8.4 7.1 0.3 2.1 2 0 0 2 2 2 0 Fungal protease inhibitor Aldo_ket_red PF00248.21 ORF123718 - 0.062 12.5 0.0 0.068 12.4 0.0 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family PP2C PF00481.21 ORF123700 - 3.4e-20 72.8 0.1 4.1e-20 72.5 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DUF4298 PF14131.6 ORF123700 - 0.073 13.0 0.1 0.17 11.9 0.1 1.7 1 1 0 2 2 2 0 Domain of unknown function (DUF4298) ATP-grasp_6 PF18419.1 ORF123700 - 0.095 12.3 0.1 0.69 9.6 0.2 2.0 1 1 1 2 2 2 0 ATP-grasp-like domain Endonuc-FokI_C PF09254.11 ORF123700 - 0.1 11.8 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease FokI, C terminal PorA PF11271.8 ORF123205 - 0.082 12.2 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 Porin PorA BLI1 PF17324.2 ORF123205 - 0.32 11.7 9.2 1.4 9.6 9.2 1.8 1 1 0 1 1 1 0 BLOC-1 interactor 1 MmgE_PrpD PF03972.14 ORF123020 - 0.11 11.0 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 MmgE/PrpD family DUF2973 PF11189.8 ORF122974 - 0.46 10.6 6.0 0.87 9.7 5.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2973) LprI PF07007.12 ORF122890 - 0.057 14.1 2.0 0.61 10.8 2.0 2.0 1 1 0 1 1 1 0 Lysozyme inhibitor LprI DUF3412 PF11892.8 ORF122686 - 3.5e-47 159.5 0.0 3.8e-47 159.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3412) HlyE PF06109.13 ORF120263 - 5.9e-40 137.5 1.0 6.9e-40 137.3 1.0 1.0 1 0 0 1 1 1 1 Haemolysin E (HlyE) TPR_2 PF07719.17 ORF119211 - 0.074 13.2 2.1 0.23 11.7 0.8 2.3 1 1 1 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 ORF119211 - 0.091 12.8 0.7 0.13 12.4 0.7 1.2 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain PP1c_bdg PF10488.9 ORF119203 - 0.13 11.8 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase-1 catalytic subunit binding region DUF3330 PF11809.8 ORF119011 - 0.072 13.2 3.2 0.42 10.7 1.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3330) Gln-synt_C PF00120.24 ORF118690 - 0.18 10.7 0.0 0.21 10.6 0.0 1.1 1 0 0 1 1 1 0 Glutamine synthetase, catalytic domain PEN-2 PF10251.9 ORF117747 - 0.079 13.4 0.5 0.079 13.4 0.5 1.7 1 1 1 2 2 2 0 Presenilin enhancer-2 subunit of gamma secretase DUF4750 PF15938.5 ORF117565 - 0.096 12.4 0.5 0.096 12.4 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) TM231 PF10149.9 ORF117448 - 0.025 13.9 1.1 0.026 13.8 1.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 Herpes_UL87 PF03043.14 ORF116116 - 0.061 11.8 0.0 0.065 11.7 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL87 family DUF872 PF05915.12 ORF115835 - 0.17 12.1 0.3 1.3 9.2 0.3 1.9 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) U83 PF17465.2 ORF115694 - 0.067 13.3 0.8 0.42 10.8 0.1 1.9 1 1 1 2 2 2 0 Chemokine-like protein, HHV-6 U83 gene product DAO PF01266.24 ORF114189 - 5.6e-11 42.6 0.0 6.6e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 ORF114189 - 2.5e-05 23.6 0.0 3e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 ORF114189 - 0.0045 16.1 0.0 0.0045 16.1 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 ORF114189 - 0.0093 16.2 0.0 0.013 15.8 0.0 1.3 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 ORF114189 - 0.036 13.2 0.0 0.05 12.7 0.0 1.2 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 ORF114189 - 0.045 12.8 0.0 0.082 11.9 0.0 1.3 1 1 0 1 1 1 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 ORF114189 - 0.049 13.6 0.0 0.12 12.4 0.0 1.6 1 1 0 1 1 1 0 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF114189 - 0.066 11.9 0.0 0.066 11.9 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein Pyr_redox_2 PF07992.14 ORF114189 - 0.14 11.3 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 ORF114189 - 0.16 12.3 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DAP10 PF07213.11 ORF113237 - 0.0064 16.4 0.1 0.012 15.6 0.1 1.6 1 0 0 1 1 1 1 DAP10 membrane protein ATP-cone PF03477.16 ORF112532 - 7.2e-16 58.5 0.1 8.3e-16 58.3 0.1 1.1 1 0 0 1 1 1 1 ATP cone domain Nre_C PF04895.12 ORF112532 - 0.099 12.6 0.1 0.19 11.7 0.1 1.5 1 1 0 1 1 1 0 Archaeal Nre, C-terminal DPM3 PF08285.11 ORF11230 - 0.081 13.1 0.2 0.081 13.1 0.2 1.9 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Flavodoxin_5 PF12724.7 ORF112220 - 7.8e-23 81.3 0.1 1.4e-22 80.5 0.0 1.4 2 0 0 2 2 2 1 Flavodoxin domain INT_SG_DDX_CT_C PF15300.6 ORF111870 - 0.2 11.5 0.0 0.32 10.8 0.0 1.4 1 0 0 1 1 1 0 INTS6/SAGE1/DDX26B/CT45 C-terminus DUF3724 PF12521.8 ORF111435 - 0.00081 19.1 16.1 0.33 10.9 0.3 4.8 3 1 1 4 4 4 3 Protein of unknown function (DUF3724) DUF2194 PF09960.9 ORF111103 - 0.038 12.4 0.0 0.038 12.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2194) GyrB_insert PF18053.1 ORF110742 - 0.23 11.3 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 DNA gyrase B subunit insert domain DUF771 PF05595.11 ORF10978 - 0.0011 18.8 0.7 0.0015 18.4 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF771) DUF5565 PF17720.1 ORF109627 - 0.008 15.1 0.1 0.0091 14.9 0.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5565) SPOB_ab PF14682.6 ORF108812 - 0.13 12.3 0.1 0.16 12.0 0.1 1.1 1 0 0 1 1 1 0 Sporulation initiation phospho-transferase B, C-terminal MORN PF02493.20 ORF108219 - 8.3e-18 63.2 13.2 1.4e-05 24.7 2.3 4.9 5 0 0 5 5 5 4 MORN repeat Aldo_ket_red PF00248.21 ORF107912 - 2.6e-17 63.0 0.0 3e-17 62.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Keratin_assoc PF09775.9 ORF107500 - 0.035 13.8 1.4 0.041 13.5 1.4 1.1 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 TM231 PF10149.9 ORF107497 - 0.025 13.9 1.1 0.026 13.8 1.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 HEPN_SAV2148 PF18725.1 ORF107428 - 0.18 11.2 0.0 0.22 10.9 0.0 1.0 1 0 0 1 1 1 0 SAV2148-like HEPN zf-CCHC_6 PF15288.6 ORF105823 - 2.5 8.0 7.5 3.8 7.4 0.5 2.4 1 1 1 2 2 2 0 Zinc knuckle Ricin_B_lectin PF00652.22 ORF104081 - 0.01 16.1 0.3 0.013 15.8 0.3 1.1 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin domain DUF4702 PF15774.5 ORF103532 - 0.098 11.6 0.1 0.11 11.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4702) SnAC PF14619.6 ORF101971 - 0.26 11.9 2.1 0.35 11.5 2.1 1.2 1 0 0 1 1 1 0 Snf2-ATP coupling, chromatin remodelling complex Herpes_UL56 PF04534.12 ORF101257 - 0.055 12.9 0.2 0.058 12.9 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL56 protein DUF3330 PF11809.8 ORF100745 - 0.072 13.2 3.2 0.42 10.7 1.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3330) ESF1 PF18209.1 ORF100408 - 1.8 8.6 5.9 0.24 11.3 1.3 1.9 2 0 0 2 2 2 0 Embryo surrounding factor 1 TraG_N PF07916.11 ORF100389 - 0.13 11.0 0.1 0.15 10.9 0.1 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region YlzJ PF14035.6 NODE_56608_length_301_cov_1.406015_g48670_i0reverse_frame_1 - 0.1 12.8 0.0 0.22 11.7 0.0 1.6 1 1 0 1 1 1 0 YlzJ-like protein Taq-exonuc PF09281.10 NODE_56606_length_301_cov_1.443609_g48668_i0forward_frame_1 - 0.056 13.5 0.0 0.068 13.2 0.0 1.1 1 0 0 1 1 1 0 Taq polymerase, exonuclease DnaJ PF00226.31 NODE_56605_length_301_cov_1.458647_g48667_i0reverse_frame_1 - 3.3e-21 75.2 6.7 4.5e-21 74.7 6.7 1.2 1 0 0 1 1 1 1 DnaJ domain NDUF_C2 PF06374.11 NODE_56605_length_301_cov_1.458647_g48667_i0reverse_frame_1 - 0.17 12.0 2.6 0.12 12.5 1.3 1.5 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) LAL_C2 PF18603.1 NODE_56597_length_301_cov_1.759398_g48659_i0forward_frame_1 - 0.0014 18.7 0.2 0.0023 18.1 0.2 1.3 1 0 0 1 1 1 1 L-amino acid ligase C-terminal domain 2 Ribosomal_S5 PF00333.20 NODE_56597_length_301_cov_1.759398_g48659_i0forward_frame_1 - 0.061 13.3 0.2 0.11 12.5 0.2 1.4 1 0 0 1 1 1 0 Ribosomal protein S5, N-terminal domain DUF2663 PF10864.8 NODE_56593_length_301_cov_1.819549_g48655_i0forward_frame_1 - 0.052 13.9 1.5 0.063 13.7 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF3810 PF12725.7 NODE_56590_length_301_cov_1.936090_g48652_i0reverse_frame_1 - 0.26 10.6 2.6 0.3 10.4 2.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF2367 PF10164.9 NODE_56582_length_301_cov_2.139098_g48644_i0reverse_frame_1 - 0.86 10.1 7.8 1.2 9.6 7.8 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) EF-hand_13 PF17958.1 NODE_56575_length_301_cov_2.387218_g48637_i0reverse_frame_1 - 0.13 12.1 0.6 0.18 11.6 0.4 1.4 1 1 0 1 1 1 0 EF-hand domain DUF1492 PF07374.11 NODE_56572_length_301_cov_2.563910_g48634_i0forward_frame_1 - 0.011 15.8 0.4 0.018 15.2 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1492) Notch PF00066.17 NODE_56572_length_301_cov_2.563910_g48634_i0forward_frame_1 - 0.11 13.0 0.4 0.11 13.0 0.4 3.0 3 0 0 3 3 3 0 LNR domain PMT PF02366.18 NODE_56559_length_301_cov_3.131579_g48621_i0reverse_frame_1 - 1.5e-09 37.9 0.1 1.7e-09 37.7 0.1 1.0 1 0 0 1 1 1 1 Dolichyl-phosphate-mannose-protein mannosyltransferase mit_SMPDase PF14724.6 NODE_56558_length_301_cov_3.142857_g48620_i0reverse_frame_1 - 0.34 8.8 1.4 0.4 8.6 1.4 1.0 1 0 0 1 1 1 0 Mitochondrial-associated sphingomyelin phosphodiesterase PseudoU_synth_1 PF01416.20 NODE_56558_length_301_cov_3.142857_g48620_i0forward_frame_1 - 0.0051 17.3 0.1 0.0062 17.0 0.1 1.1 1 0 0 1 1 1 1 tRNA pseudouridine synthase SHIPPO-rpt PF07004.12 NODE_56557_length_301_cov_3.206767_g48619_i0forward_frame_1 - 0.28 12.2 0.1 0.28 12.2 0.1 3.2 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat Nucleolin_bd PF16725.5 NODE_56549_length_301_cov_6.605263_g48611_i0reverse_frame_1 - 0.015 15.0 2.9 0.025 14.2 1.6 1.9 1 1 1 2 2 2 0 Nucleolin binding domain DUF2587 PF10759.9 NODE_56549_length_301_cov_6.605263_g48611_i0reverse_frame_1 - 0.028 13.9 0.6 0.054 13.0 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2587) YtxH PF12732.7 NODE_56549_length_301_cov_6.605263_g48611_i0reverse_frame_1 - 0.43 11.2 3.1 1.1 9.9 3.1 1.9 1 1 0 1 1 1 0 YtxH-like protein DUF5447 PF17525.2 NODE_56530_length_301_cov_59.838346_g48592_i0forward_frame_1 - 0.0066 16.9 0.3 0.0075 16.7 0.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5447) MerR PF00376.23 NODE_56528_length_301_cov_61.996241_g48590_i0forward_frame_1 - 0.00046 19.9 0.0 0.88 9.4 0.0 2.3 2 0 0 2 2 2 2 MerR family regulatory protein MH1 PF03165.16 NODE_56527_length_301_cov_62.011278_g48589_i0reverse_frame_1 - 0.04 14.1 0.1 0.048 13.9 0.1 1.1 1 0 0 1 1 1 0 MH1 domain Orthoreo_P10 PF07204.11 NODE_56520_length_301_cov_76.285714_g48582_i0forward_frame_1 - 0.074 13.0 1.4 0.12 12.4 0.9 1.5 1 1 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 TMIE PF16038.5 NODE_56520_length_301_cov_76.285714_g48582_i0forward_frame_1 - 0.089 12.6 0.3 0.089 12.6 0.3 1.6 2 0 0 2 2 2 0 TMIE protein DUF2208 PF09973.9 NODE_56518_length_301_cov_81.240602_g48580_i0reverse_frame_1 - 0.058 13.0 1.3 0.071 12.7 1.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) DUF4131 PF13567.6 NODE_56518_length_301_cov_81.240602_g48580_i0reverse_frame_1 - 0.066 12.9 0.2 0.066 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) AP3D1 PF06375.11 NODE_56518_length_301_cov_81.240602_g48580_i0forward_frame_1 - 0.055 13.7 3.2 0.052 13.8 3.2 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Dynein_AAA_lid PF17852.1 NODE_56515_length_301_cov_86.590226_g48577_i0reverse_frame_1 - 3.6e-06 27.1 0.1 5.3e-06 26.5 0.1 1.2 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_7 PF12775.7 NODE_56515_length_301_cov_86.590226_g48577_i0reverse_frame_1 - 0.019 14.5 0.0 0.027 14.0 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Use1 PF09753.9 NODE_56515_length_301_cov_86.590226_g48577_i0reverse_frame_1 - 0.049 13.3 0.0 0.053 13.2 0.0 1.0 1 0 0 1 1 1 0 Membrane fusion protein Use1 TatC PF00902.18 NODE_56513_length_301_cov_87.815789_g48575_i0reverse_frame_1 - 0.78 9.5 5.8 5.3 6.8 1.6 2.0 1 1 1 2 2 2 0 Sec-independent protein translocase protein (TatC) Cu2_monooxygen PF01082.20 NODE_56509_length_301_cov_95.387218_g48571_i0reverse_frame_1 - 0.1 12.8 0.2 0.12 12.6 0.2 1.1 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain Lustrin_cystein PF14625.6 NODE_56509_length_301_cov_95.387218_g48571_i0forward_frame_1 - 1.6 9.2 11.7 0.15 12.5 4.9 2.4 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain PROL5-SMR PF15621.6 NODE_56506_length_301_cov_105.071429_g48568_i0reverse_frame_1 - 0.16 12.5 1.8 0.31 11.6 0.1 1.9 2 0 0 2 2 2 0 Proline-rich submaxillary gland androgen-regulated family LEDGF PF11467.8 NODE_56489_length_301_cov_2118.766917_g48551_i0reverse_frame_1 - 0.024 14.2 0.1 0.035 13.7 0.1 1.2 1 0 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) DUF3678 PF12435.8 NODE_56483_length_302_cov_1.183521_g48545_i0forward_frame_1 - 0.012 15.0 1.3 0.024 14.0 1.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) DUF2777 PF10949.8 NODE_56470_length_302_cov_1.685393_g48532_i0reverse_frame_1 - 0.11 12.1 1.8 0.15 11.7 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) PH_18 PF18469.1 NODE_56466_length_302_cov_1.872659_g48528_i0forward_frame_1 - 0.022 14.7 0.1 0.026 14.5 0.1 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain GntP_permease PF02447.16 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 4.4e-37 127.8 4.3 4.7e-37 127.7 4.3 1.0 1 0 0 1 1 1 1 GntP family permease DctM PF06808.12 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 2.4e-07 30.0 2.3 2.9e-07 29.7 2.3 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component CitMHS PF03600.16 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 3.5e-05 23.1 5.6 4.6e-05 22.8 5.6 1.2 1 0 0 1 1 1 1 Citrate transporter Na_H_antiporter PF03553.14 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 3.8e-05 23.1 3.5 4.6e-05 22.8 3.5 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter family DUF1576 PF07613.11 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 0.024 14.1 4.5 0.029 13.9 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1576) Na_H_antiport_2 PF13726.6 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 0.055 13.6 2.7 0.075 13.2 2.7 1.2 1 0 0 1 1 1 0 Na+-H+ antiporter family DUF4064 PF13273.6 NODE_56460_length_302_cov_2.078652_g48522_i0forward_frame_1 - 1.4 9.3 9.3 2.3 8.6 1.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Transmemb_17 PF09799.9 NODE_56457_length_302_cov_2.228464_g48519_i0reverse_frame_1 - 0.043 14.4 2.0 0.06 13.9 2.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein Ldh_1_N PF00056.23 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 5.1e-15 55.8 0.3 6.7e-15 55.4 0.3 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain HTH_Tnp_4 PF13613.6 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 0.029 14.1 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_Tnp_ISL3 PF13542.6 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 0.035 13.5 0.0 0.062 12.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Sigma70_r4_2 PF08281.12 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 0.045 13.4 0.0 0.074 12.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Sigma70_r4 PF04545.16 NODE_56457_length_302_cov_2.228464_g48519_i0forward_frame_1 - 0.05 13.1 0.0 0.084 12.4 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 Sars6 PF12133.8 NODE_56456_length_302_cov_2.235955_g48518_i0reverse_frame_1 - 0.28 11.1 5.6 0.48 10.4 5.6 1.5 1 0 0 1 1 1 0 Open reading frame 6 from SARS coronavirus SHR3_chaperone PF08229.11 NODE_56455_length_302_cov_2.254682_g48517_i0forward_frame_1 - 1.3 7.9 5.5 1.4 7.9 5.0 1.3 1 1 0 1 1 1 0 ER membrane protein SH3 Cyt_bd_oxida_I PF01654.17 NODE_56454_length_302_cov_2.269663_g48516_i0reverse_frame_1 - 2.4e-28 98.9 0.1 2.6e-28 98.8 0.1 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I FANCA_interact PF15751.5 NODE_56449_length_302_cov_2.602996_g48511_i0reverse_frame_1 - 0.013 16.0 2.4 0.019 15.5 2.4 1.4 1 1 0 1 1 1 0 FAAP20 FANCA interaction domain Oxidored_nitro PF00148.19 NODE_56446_length_302_cov_2.872659_g48508_i0forward_frame_1 - 0.047 12.4 0.0 0.052 12.3 0.0 1.0 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase zf-C3HC4_3 PF13920.6 NODE_56435_length_302_cov_17.846442_g48497_i0reverse_frame_1 - 0.0074 16.1 17.3 0.0074 16.1 17.3 2.4 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) RCC1_2 PF13540.6 NODE_56433_length_302_cov_25.382022_g48495_i0reverse_frame_1 - 0.019 14.8 7.9 0.55 10.1 0.4 2.6 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat DUF5570 PF17731.1 NODE_56419_length_302_cov_53.913858_g48481_i0reverse_frame_1 - 0.13 12.3 0.4 0.16 12.1 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5570) Pept_S41_N PF18294.1 NODE_56419_length_302_cov_53.913858_g48481_i0reverse_frame_1 - 0.17 11.9 1.4 0.25 11.4 1.4 1.6 1 1 0 1 1 1 0 Peptidase S41 N-terminal domain Pacifastin_I PF05375.13 NODE_56417_length_302_cov_58.202247_g48479_i0forward_frame_1 - 0.06 13.1 0.4 0.1 12.3 0.4 1.3 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) DUF2291 PF10054.9 NODE_56416_length_302_cov_58.367041_g48478_i0forward_frame_1 - 0.044 13.5 0.1 0.051 13.3 0.1 1.2 1 0 0 1 1 1 0 Predicted periplasmic lipoprotein (DUF2291) Drc1-Sld2 PF11719.8 NODE_56415_length_302_cov_60.838951_g48477_i0reverse_frame_1 - 0.11 12.1 19.8 0.13 11.8 19.8 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein Secretin_N_2 PF07655.13 NODE_56415_length_302_cov_60.838951_g48477_i0forward_frame_1 - 2 9.0 17.5 2.4 8.7 17.5 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain DUF3797 PF12677.7 NODE_56413_length_302_cov_63.662921_g48475_i0forward_frame_1 - 0.03 14.2 0.3 0.066 13.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) DUF971 PF06155.12 NODE_56413_length_302_cov_63.662921_g48475_i0forward_frame_1 - 2.8 8.7 6.9 0.44 11.2 0.6 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF971) DUF3958 PF13125.6 NODE_56411_length_302_cov_66.977528_g48473_i0forward_frame_1 - 0.092 13.0 6.1 0.16 12.2 6.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3958) JmjC PF02373.22 NODE_56403_length_302_cov_87.554307_g48465_i0reverse_frame_1 - 3.8e-05 24.1 0.0 4.7e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_8 PF13621.6 NODE_56403_length_302_cov_87.554307_g48465_i0reverse_frame_1 - 0.0019 18.0 0.0 0.0024 17.6 0.0 1.1 1 0 0 1 1 1 1 Cupin-like domain AAA_17 PF13207.6 NODE_56399_length_302_cov_98.205993_g48461_i0forward_frame_1 - 0.051 14.0 0.1 0.061 13.7 0.1 1.1 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 NODE_56399_length_302_cov_98.205993_g48461_i0forward_frame_1 - 0.067 13.7 0.1 0.09 13.3 0.1 1.1 1 0 0 1 1 1 0 AAA domain ADK PF00406.22 NODE_56399_length_302_cov_98.205993_g48461_i0forward_frame_1 - 0.16 12.1 0.1 0.17 12.0 0.1 1.1 1 0 0 1 1 1 0 Adenylate kinase Fer4_5 PF12801.7 NODE_56398_length_302_cov_99.479401_g48460_i0reverse_frame_1 - 0.11 12.4 1.4 1.6 8.7 1.5 2.1 1 1 1 2 2 2 0 4Fe-4S binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks262.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks262.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks262.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks262.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-RING_10 PF16685.5 NODE_56386_length_302_cov_393.726592_g48448_i0forward_frame_1 - 0.067 13.3 0.2 0.1 12.8 0.2 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 Fer2 PF00111.27 NODE_56384_length_302_cov_6425.018727_g48446_i0reverse_frame_1 - 1.7e-05 24.7 0.1 3.1e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain S-AdoMet_synt_C PF02773.16 NODE_56383_length_302_cov_10022.329588_g48445_i0forward_frame_1 - 4.7e-40 136.8 2.0 5.5e-40 136.6 2.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain YidD PF01809.18 NODE_56378_length_303_cov_1.190299_g48440_i0reverse_frame_1 - 6.5e-25 86.8 2.5 6.5e-25 86.8 2.5 1.5 2 0 0 2 2 2 1 Putative membrane protein insertion efficiency factor Whib PF02467.16 NODE_56378_length_303_cov_1.190299_g48440_i0reverse_frame_1 - 0.0087 16.6 0.1 0.24 12.0 0.0 2.1 2 0 0 2 2 2 1 Transcription factor WhiB YWFCY PF14293.6 NODE_56378_length_303_cov_1.190299_g48440_i0reverse_frame_1 - 0.22 11.8 1.2 0.32 11.3 1.2 1.4 1 1 0 1 1 1 0 YWFCY protein CHU_C PF13585.6 NODE_56376_length_303_cov_1.395522_g48438_i0forward_frame_1 - 0.095 12.8 3.9 0.22 11.6 0.2 2.0 1 1 1 2 2 2 0 C-terminal domain of CHU protein family CCB1 PF12046.8 NODE_56373_length_303_cov_1.440299_g48435_i0forward_frame_1 - 8.4 5.7 6.2 10 5.5 6.1 1.3 1 1 0 1 1 1 0 Cofactor assembly of complex C subunit B Exotox-A_bind PF09101.10 NODE_56367_length_303_cov_1.619403_g48429_i0forward_frame_1 - 0.046 13.1 0.0 0.049 13.0 0.0 1.1 1 0 0 1 1 1 0 Exotoxin A binding U83 PF17465.2 NODE_56362_length_303_cov_1.779851_g48424_i0reverse_frame_1 - 0.088 12.9 0.9 0.16 12.2 0.6 1.6 1 1 1 2 2 2 0 Chemokine-like protein, HHV-6 U83 gene product TPR_8 PF13181.6 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 3.4e-05 23.7 0.2 6.6e-05 22.8 0.2 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 8.3e-05 22.2 0.2 0.00017 21.3 0.2 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.00041 20.6 0.0 0.00071 19.8 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.00048 20.0 0.0 0.00087 19.2 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.0026 17.5 0.0 0.0043 16.9 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat BRO1 PF03097.18 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_1 - 0.0051 15.7 0.4 0.0063 15.4 0.4 1.0 1 0 0 1 1 1 1 BRO1-like domain DpnI_C PF17726.1 NODE_56349_length_303_cov_2.108209_g48411_i0reverse_frame_1 - 0.38 10.9 4.0 1.8 8.7 4.0 2.1 1 1 0 1 1 1 0 Dam-replacing HTH domain Cys_rich_CWC PF14375.6 NODE_56348_length_303_cov_2.115672_g48410_i0forward_frame_1 - 0.054 13.9 0.8 0.075 13.4 0.2 1.6 2 0 0 2 2 2 0 Cysteine-rich CWC DUF2682 PF10909.8 NODE_56346_length_303_cov_2.175373_g48408_i0forward_frame_1 - 0.0062 17.0 3.7 0.0072 16.8 1.3 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF2682) RCC1_2 PF13540.6 NODE_56343_length_303_cov_2.223881_g48405_i0reverse_frame_1 - 1.9e-06 27.5 0.1 3.1e-06 26.8 0.1 1.4 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_56343_length_303_cov_2.223881_g48405_i0reverse_frame_1 - 5.3e-06 27.0 1.5 0.012 16.2 0.6 2.3 2 1 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Toxin_12 PF07740.12 NODE_56337_length_303_cov_2.690299_g48399_i0forward_frame_1 - 0.049 14.3 3.6 0.22 12.3 3.6 2.1 1 0 0 1 1 1 0 Ion channel inhibitory toxin DUF3927 PF13064.6 NODE_56336_length_303_cov_2.832090_g48398_i0forward_frame_1 - 0.11 12.5 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) UL20 PF17582.2 NODE_56329_length_303_cov_3.645522_g48391_i0forward_frame_1 - 0.35 10.1 4.5 0.39 10.0 4.5 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL20 Ndc1_Nup PF09531.10 NODE_56329_length_303_cov_3.645522_g48391_i0forward_frame_1 - 3.3 6.3 7.3 3.6 6.1 7.3 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Lysis_col PF02402.16 NODE_56327_length_303_cov_3.750000_g48389_i0reverse_frame_1 - 0.25 11.1 0.0 0.46 10.2 0.0 1.4 1 0 0 1 1 1 0 Lysis protein zf-C2H2_4 PF13894.6 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 2e-05 25.0 3.6 0.063 14.2 1.0 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.00084 19.0 1.9 0.15 11.9 0.1 2.3 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-met PF12874.7 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.0017 18.7 1.4 0.12 12.8 0.6 2.3 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.0062 16.9 7.8 0.55 10.8 0.1 2.6 3 0 0 3 3 3 2 Zinc finger, C2H2 type Arc_trans_TRASH PF08394.10 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.086 13.2 1.0 2.6 8.4 0.0 2.3 2 0 0 2 2 2 0 Archaeal TRASH domain DZR PF12773.7 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.099 12.7 2.5 0.47 10.5 2.5 1.9 1 1 0 1 1 1 0 Double zinc ribbon zf-HYPF PF07503.12 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 0.58 10.0 3.3 6.8 6.6 0.1 2.6 3 0 0 3 3 3 0 HypF finger zf-C2H2_6 PF13912.6 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_1 - 1.1 9.4 13.7 0.45 10.6 1.4 3.0 2 1 0 2 2 2 0 C2H2-type zinc finger FAD_binding_4 PF01565.23 NODE_56313_length_303_cov_49.828358_g48375_i0reverse_frame_1 - 0.076 12.8 1.2 0.097 12.4 1.2 1.1 1 0 0 1 1 1 0 FAD binding domain DUF2705 PF10920.8 NODE_56310_length_303_cov_56.145522_g48372_i0forward_frame_1 - 0.096 12.0 9.0 0.12 11.7 9.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2705) MASE4 PF17158.4 NODE_56308_length_303_cov_58.391791_g48370_i0forward_frame_1 - 0.089 12.1 4.8 0.1 11.8 4.8 1.1 1 0 0 1 1 1 0 Membrane-associated sensor, integral membrane domain CCER1 PF15482.6 NODE_56305_length_303_cov_62.417910_g48367_i0reverse_frame_1 - 0.26 11.2 9.2 0.3 11.0 9.2 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 TRAPP PF04051.16 NODE_56302_length_303_cov_63.940299_g48364_i0reverse_frame_1 - 2.5e-05 24.0 0.2 2.5e-05 24.0 0.2 1.1 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component DUF5533 PF17685.1 NODE_56292_length_303_cov_77.690299_g48354_i0reverse_frame_1 - 0.67 10.3 7.4 5.7 7.3 0.3 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5533) Lac_bphage_repr PF06543.12 NODE_56290_length_303_cov_80.604478_g48352_i0reverse_frame_1 - 0.037 14.0 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor YbjN PF10722.9 NODE_56290_length_303_cov_80.604478_g48352_i0reverse_frame_1 - 0.1 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative bacterial sensory transduction regulator NADH_4Fe-4S PF10589.9 NODE_56286_length_303_cov_90.376866_g48348_i0forward_frame_1 - 0.062 13.4 5.7 0.17 11.9 5.7 1.8 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region zn-ribbon_14 PF16503.5 NODE_56283_length_303_cov_98.104478_g48345_i0reverse_frame_1 - 0.033 13.7 1.4 0.033 13.7 1.4 2.6 2 0 0 2 2 2 0 Zinc-ribbon SLC3A2_N PF16028.5 NODE_56269_length_303_cov_349.126866_g48332_i0forward_frame_1 - 0.0041 16.6 0.2 1.7 8.3 0.0 2.1 2 0 0 2 2 2 2 Solute carrier family 3 member 2 N-terminus Cytochrom_B559 PF00283.19 NODE_56265_length_303_cov_2481.656716_g48328_i0forward_frame_1 - 1.7e-14 52.9 5.4 3.2e-14 52.0 5.4 1.5 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits BCLP PF12304.8 NODE_56256_length_304_cov_1.342007_g48319_i0reverse_frame_3 - 0.14 11.7 0.2 0.31 10.6 0.2 1.5 1 1 1 2 2 2 0 Beta-casein like protein APO_RNA-bind PF05634.11 NODE_56256_length_304_cov_1.342007_g48319_i0reverse_frame_2 - 0.011 15.2 0.2 0.014 14.8 0.2 1.1 1 0 0 1 1 1 0 APO RNA-binding Elf1 PF05129.13 NODE_56256_length_304_cov_1.342007_g48319_i0reverse_frame_2 - 0.24 11.4 3.1 0.85 9.7 0.1 2.2 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like PhnG PF06754.12 NODE_56256_length_304_cov_1.342007_g48319_i0forward_frame_3 - 0.13 12.2 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG CPSase_L_D2 PF02786.17 NODE_56254_length_304_cov_1.386617_g48317_i0forward_frame_2 - 7.8e-39 133.4 0.1 8.4e-39 133.3 0.1 1.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 NODE_56254_length_304_cov_1.386617_g48317_i0forward_frame_2 - 0.00052 19.6 0.0 0.00064 19.3 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 NODE_56254_length_304_cov_1.386617_g48317_i0forward_frame_2 - 0.0073 16.4 0.0 0.0088 16.1 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain RIX1 PF08167.12 NODE_56253_length_304_cov_1.405204_g48316_i0forward_frame_3 - 0.15 11.8 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis Endomucin PF07010.12 NODE_56249_length_304_cov_1.486989_g48312_i0reverse_frame_2 - 0.21 11.5 1.0 0.27 11.2 1.0 1.1 1 0 0 1 1 1 0 Endomucin cNMP_binding PF00027.29 NODE_56249_length_304_cov_1.486989_g48312_i0forward_frame_2 - 0.047 13.8 0.0 2.3 8.3 0.0 2.1 1 1 0 1 1 1 0 Cyclic nucleotide-binding domain CRAL_TRIO PF00650.20 NODE_56248_length_304_cov_1.490706_g48311_i0forward_frame_2 - 0.1 12.3 3.8 0.13 12.0 3.8 1.1 1 0 0 1 1 1 0 CRAL/TRIO domain DUF3622 PF12286.8 NODE_56247_length_304_cov_1.557621_g48310_i0forward_frame_3 - 0.11 12.9 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3622) Helitron_like_N PF14214.6 NODE_56247_length_304_cov_1.557621_g48310_i0forward_frame_2 - 0.0014 18.9 0.0 0.0016 18.7 0.0 1.3 1 1 0 1 1 1 1 Helitron helicase-like domain at N-terminus Med31 PF05669.12 NODE_56245_length_304_cov_1.583643_g48308_i0forward_frame_3 - 0.013 15.5 0.7 0.018 15.0 0.3 1.5 2 0 0 2 2 2 0 SOH1 SMODS PF18144.1 NODE_56245_length_304_cov_1.583643_g48308_i0forward_frame_3 - 0.06 13.5 0.5 0.072 13.3 0.5 1.1 1 0 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain Multi_Drug_Res PF00893.19 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 3.1e-29 101.5 7.1 3.5e-29 101.3 7.1 1.0 1 0 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 0.0023 18.1 9.8 0.0032 17.6 9.8 1.3 1 1 0 1 1 1 1 EamA-like transporter family UPF0060 PF02694.15 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 0.018 15.2 6.7 0.025 14.8 6.7 1.3 1 1 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family TMEM234 PF10639.9 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 0.038 14.0 0.0 0.042 13.9 0.0 1.3 1 1 0 1 1 1 0 Putative transmembrane family 234 DUF3493 PF11998.8 NODE_56241_length_304_cov_1.676580_g48304_i0forward_frame_2 - 4 7.7 8.3 1.7 8.9 1.8 2.3 1 1 1 2 2 2 0 Low psii accumulation1 / Rep27 MRP-S35 PF10246.9 NODE_56240_length_304_cov_1.684015_g48303_i0reverse_frame_3 - 0.053 13.5 0.0 0.061 13.3 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal protein MRP-S35 FEZ PF07763.13 NODE_56240_length_304_cov_1.684015_g48303_i0forward_frame_2 - 0.044 13.5 0.2 0.051 13.3 0.2 1.1 1 0 0 1 1 1 0 FEZ-like protein DUF2986 PF11661.8 NODE_56232_length_304_cov_1.895911_g48295_i0forward_frame_2 - 0.58 10.7 4.3 0.52 10.9 2.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2986) Promethin PF16015.5 NODE_56228_length_304_cov_2.044610_g48291_i0reverse_frame_3 - 0.01 15.7 0.2 0.014 15.4 0.2 1.2 1 0 0 1 1 1 0 Promethin VSG_B PF13206.6 NODE_56227_length_304_cov_2.074349_g48290_i0forward_frame_2 - 0.38 9.9 1.4 0.47 9.6 1.4 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain Adipokin_hormo PF06377.11 NODE_56226_length_304_cov_2.115242_g48289_i0reverse_frame_3 - 0.084 13.2 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 Adipokinetic hormone Retrotran_gag_2 PF14223.6 NODE_56226_length_304_cov_2.115242_g48289_i0forward_frame_3 - 0.025 14.3 0.0 0.036 13.7 0.0 1.3 1 1 0 1 1 1 0 gag-polypeptide of LTR copia-type Toxin_29 PF08116.11 NODE_56226_length_304_cov_2.115242_g48289_i0forward_frame_2 - 0.0012 18.8 2.4 0.0028 17.6 2.4 1.7 1 0 0 1 1 1 1 PhTx neurotoxin family FXa_inhibition PF14670.6 NODE_56224_length_304_cov_2.174721_g48287_i0forward_frame_2 - 0.085 13.2 1.2 0.21 11.9 1.2 1.8 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site Mt_ATP-synt_B PF05405.14 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.011 15.3 10.8 0.059 13.0 2.9 2.0 1 1 1 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Phage_GP20 PF06810.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.02 14.7 11.4 0.2 11.5 11.4 1.9 1 1 0 1 1 1 0 Phage minor structural protein GP20 DUF3583 PF12126.8 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.032 13.7 8.1 0.036 13.5 8.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3583) DUF3584 PF12128.8 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.037 11.5 12.4 0.043 11.4 12.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) L_lactis_ph-MCP PF06673.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.043 12.8 3.6 0.046 12.7 3.6 1.1 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein Baculo_PEP_C PF04513.12 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.053 13.6 2.4 0.089 12.8 1.8 1.6 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Octopine_DH PF02317.17 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.082 13.0 0.9 0.091 12.8 0.9 1.0 1 0 0 1 1 1 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain TMPIT PF07851.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.097 11.9 7.8 0.11 11.8 7.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein Uso1_p115_C PF04871.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.11 12.9 12.0 0.15 12.5 12.0 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region TMF_TATA_bd PF12325.8 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.11 12.7 15.2 0.21 11.8 15.2 1.6 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding UPF0242 PF06785.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.18 11.9 16.3 0.24 11.5 16.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF1512 PF07431.12 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.2 10.7 3.4 0.23 10.4 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1512) DUF4407 PF14362.6 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.21 10.9 7.3 0.25 10.7 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-ZPR1 PF03367.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.24 11.2 2.6 0.31 10.9 2.6 1.2 1 0 0 1 1 1 0 ZPR1 zinc-finger domain NPV_P10 PF05531.12 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.3 11.6 6.1 2 8.9 6.1 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.12 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.4 10.7 6.9 0.62 10.1 6.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) HGD-D PF06050.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.48 10.1 3.2 0.53 10.0 3.2 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component Exonuc_VII_L PF02601.15 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.52 9.8 9.4 0.62 9.6 9.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF948 PF06103.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.7 10.2 4.5 4.8 7.5 0.8 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1640 PF07798.11 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.87 9.6 11.9 1.1 9.3 11.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DUF883 PF05957.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 0.87 10.2 7.1 2.2 8.9 6.7 1.8 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) Atg14 PF10186.9 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 1.1 8.3 12.2 1.3 8.0 12.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 V_ATPase_I PF01496.19 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 4.5 5.1 7.2 5.3 4.8 7.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Goodbye PF17109.5 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 4.7 7.7 6.8 11 6.5 0.2 2.6 1 1 2 3 3 3 0 fungal STAND N-terminal Goodbye domain YabA PF06156.13 NODE_56223_length_304_cov_2.178439_g48286_i0reverse_frame_2 - 5 7.8 10.2 42 4.9 10.2 2.0 1 1 0 1 1 1 0 Initiation control protein YabA DUF5535 PF17687.1 NODE_56221_length_304_cov_2.282528_g48284_i0reverse_frame_3 - 0.0099 16.0 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5535) Herpes_DNAp_acc PF04929.12 NODE_56221_length_304_cov_2.282528_g48284_i0reverse_frame_2 - 0.027 13.4 0.1 0.032 13.2 0.1 1.0 1 0 0 1 1 1 0 Herpes DNA replication accessory factor DUF4307 PF14155.6 NODE_56221_length_304_cov_2.282528_g48284_i0reverse_frame_2 - 0.027 14.3 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) Sin3_corepress PF08295.12 NODE_56220_length_304_cov_2.312268_g48283_i0forward_frame_3 - 3.1e-20 72.0 0.1 4.1e-20 71.7 0.1 1.1 1 0 0 1 1 1 1 Sin3 family co-repressor DUF1936 PF09151.10 NODE_56213_length_304_cov_2.416357_g48276_i0reverse_frame_2 - 0.067 13.1 0.1 0.15 12.0 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) Arabino_trans_C PF14896.6 NODE_56211_length_304_cov_2.546468_g48274_i0reverse_frame_3 - 0.053 12.5 0.0 0.065 12.2 0.0 1.1 1 0 0 1 1 1 0 EmbC C-terminal domain Exo_endo_phos PF03372.23 NODE_56209_length_304_cov_2.661710_g48272_i0forward_frame_3 - 0.026 14.0 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Lysis_col PF02402.16 NODE_56204_length_304_cov_2.907063_g48267_i0reverse_frame_2 - 0.055 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Lysis protein SOCS_box PF07525.16 NODE_56203_length_304_cov_2.996283_g48266_i0forward_frame_3 - 0.12 12.8 4.6 0.53 10.7 1.0 2.5 2 1 0 2 2 2 0 SOCS box Pentapeptide_3 PF13576.6 NODE_56200_length_304_cov_3.245353_g48263_i0forward_frame_2 - 0.0088 16.2 0.1 0.014 15.5 0.1 1.3 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) cEGF PF12662.7 NODE_56200_length_304_cov_3.245353_g48263_i0forward_frame_2 - 0.0095 15.9 1.0 0.025 14.5 1.0 1.7 1 0 0 1 1 1 1 Complement Clr-like EGF-like Adeno_GP19K PF04881.13 NODE_56197_length_304_cov_3.475836_g48260_i0forward_frame_2 - 0.058 13.4 2.8 0.078 13.0 1.5 1.7 1 1 1 2 2 2 0 Adenovirus GP19K Corona_5a PF06336.11 NODE_56197_length_304_cov_3.475836_g48260_i0forward_frame_2 - 0.21 11.6 4.2 2.1 8.4 4.2 2.1 1 1 0 1 1 1 0 Coronavirus 5a protein Myticin-prepro PF10690.9 NODE_56195_length_304_cov_3.728625_g48258_i0reverse_frame_3 - 0.15 12.4 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel PX PF00787.24 NODE_56193_length_304_cov_4.412639_g48256_i0forward_frame_3 - 4.4e-05 23.4 0.2 7.7e-05 22.6 0.2 1.5 1 0 0 1 1 1 1 PX domain DUF4709 PF15821.5 NODE_56193_length_304_cov_4.412639_g48256_i0forward_frame_3 - 0.0033 17.7 0.6 0.0045 17.3 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4709) c-SKI_SMAD_bind PF08782.10 NODE_56193_length_304_cov_4.412639_g48256_i0forward_frame_3 - 0.0063 16.7 0.3 0.0075 16.5 0.3 1.3 1 0 0 1 1 1 1 c-SKI Smad4 binding domain zf-CGNR PF11706.8 NODE_56190_length_304_cov_5.364312_g48253_i0reverse_frame_3 - 0.095 12.6 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 CGNR zinc finger CLP1_N PF16573.5 NODE_56188_length_304_cov_10.297398_g48251_i0reverse_frame_3 - 0.046 13.9 0.1 0.061 13.5 0.1 1.3 1 0 0 1 1 1 0 N-terminal beta-sandwich domain of polyadenylation factor WND PF07861.11 NODE_56188_length_304_cov_10.297398_g48251_i0forward_frame_2 - 0.03 13.8 0.0 0.035 13.5 0.0 1.0 1 0 0 1 1 1 0 WisP family N-Terminal Region TBK1_CCD1 PF18394.1 NODE_56187_length_304_cov_16.736059_g48250_i0reverse_frame_3 - 0.0024 17.5 2.1 0.0032 17.1 2.1 1.2 1 1 0 1 1 1 1 TANK-binding kinase 1 coiled-coil domain 1 Aa_trans PF01490.18 NODE_56185_length_304_cov_38.791822_g48248_i0reverse_frame_3 - 0.026 13.2 3.9 0.035 12.8 3.9 1.2 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein BCMA-Tall_bind PF09257.10 NODE_56183_length_304_cov_43.884758_g48246_i0reverse_frame_2 - 0.51 10.5 6.3 0.78 9.9 0.2 2.4 2 0 0 2 2 2 0 BCMA, TALL-1 binding Il2rg PF15874.5 NODE_56181_length_304_cov_49.728625_g48244_i0reverse_frame_2 - 0.11 12.8 0.8 0.14 12.4 0.1 1.5 2 0 0 2 2 2 0 Putative Interleukin 2 receptor, gamma chain Choline_sulf_C PF12411.8 NODE_56181_length_304_cov_49.728625_g48244_i0forward_frame_3 - 0.0087 15.9 0.0 0.015 15.1 0.0 1.4 1 0 0 1 1 1 1 Choline sulfatase enzyme C terminal BST2 PF16716.5 NODE_56177_length_304_cov_61.211896_g48240_i0reverse_frame_3 - 0.09 13.4 0.1 0.13 12.9 0.1 1.1 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Ribosomal_S4Pg PF11993.8 NODE_56177_length_304_cov_61.211896_g48240_i0forward_frame_2 - 0.22 11.6 0.1 5.7 7.0 0.0 2.0 1 1 1 2 2 2 0 Ribosomal S4P (gammaproteobacterial) L31 PF09784.9 NODE_56176_length_304_cov_63.304833_g48239_i0forward_frame_3 - 1.8 9.0 5.1 0.27 11.7 0.5 1.9 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L31 Mut7-C PF01927.16 NODE_56175_length_304_cov_65.297398_g48238_i0reverse_frame_3 - 0.082 13.0 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Mut7-C RNAse domain PrsW-protease PF13367.6 NODE_56175_length_304_cov_65.297398_g48238_i0forward_frame_3 - 0.023 14.2 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 PrsW family intramembrane metalloprotease Collagen PF01391.18 NODE_56174_length_304_cov_67.970260_g48237_i0reverse_frame_3 - 0.016 14.9 1.5 0.024 14.4 1.5 1.2 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) zf-RING_UBOX PF13445.6 NODE_56170_length_304_cov_74.197026_g48233_i0reverse_frame_3 - 0.019 15.0 1.2 0.019 15.0 1.2 1.7 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_2 PF13639.6 NODE_56170_length_304_cov_74.197026_g48233_i0reverse_frame_3 - 2.2 8.7 8.4 0.42 11.0 4.6 1.8 2 1 0 2 2 2 0 Ring finger domain MWFE PF15879.5 NODE_56169_length_304_cov_74.977695_g48232_i0reverse_frame_3 - 0.22 11.7 2.7 0.35 11.1 2.7 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit GerPB PF10803.8 NODE_56167_length_304_cov_79.546468_g48230_i0forward_frame_2 - 0.01 15.9 0.1 0.017 15.2 0.1 1.3 1 0 0 1 1 1 0 Spore germination GerPB AAA_lid_3 PF17862.1 NODE_56166_length_304_cov_80.776952_g48229_i0reverse_frame_2 - 7.7e-14 51.2 0.3 1.4e-13 50.4 0.3 1.4 1 0 0 1 1 1 1 AAA+ lid domain Inositol_P PF00459.25 NODE_56164_length_304_cov_85.736059_g48227_i0forward_frame_2 - 2.3e-05 24.0 0.0 2.6e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Inositol monophosphatase family SHR-BD PF06650.12 NODE_56163_length_304_cov_87.171004_g48226_i0reverse_frame_3 - 3.3e-08 33.2 0.0 3.3e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 SHR-binding domain of vacuolar-sorting associated protein 13 5_nucleotid_C PF02872.18 NODE_56160_length_304_cov_92.657993_g48223_i0forward_frame_3 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 5'-nucleotidase, C-terminal domain RCC1_2 PF13540.6 NODE_56159_length_304_cov_93.855019_g48222_i0reverse_frame_3 - 0.019 14.8 5.5 0.024 14.5 0.1 2.6 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat BacteriocIIc_cy PF12173.8 NODE_56159_length_304_cov_93.855019_g48222_i0reverse_frame_3 - 0.29 11.4 2.1 0.29 11.4 0.7 1.6 1 1 1 2 2 2 0 Bacteriocin class IIc cyclic gassericin A-like ShK PF01549.24 NODE_56157_length_304_cov_98.557621_g48220_i0forward_frame_2 - 4.9 7.8 11.0 1.7 9.2 1.0 2.6 3 0 0 3 3 3 0 ShK domain-like DUF1870 PF08965.10 NODE_56156_length_304_cov_98.791822_g48219_i0reverse_frame_2 - 0.04 13.9 0.0 0.043 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1870) UPF0139 PF03669.13 NODE_56154_length_304_cov_114.899628_g48217_i0reverse_frame_3 - 1 9.2 8.9 1.5 8.8 3.0 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0139) DUF2967 PF11179.8 NODE_56153_length_304_cov_120.657993_g48216_i0reverse_frame_2 - 0.0014 16.9 0.3 0.0015 16.8 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2967) Serglycin PF04360.12 NODE_56153_length_304_cov_120.657993_g48216_i0reverse_frame_2 - 0.13 12.2 0.4 0.13 12.2 0.4 1.2 1 0 0 1 1 1 0 Serglycin ApoB100_C PF12491.8 NODE_56143_length_304_cov_224.721190_g48206_i0reverse_frame_2 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal CCDC117 PF15810.5 NODE_56142_length_304_cov_241.267658_g48205_i0forward_frame_3 - 0.16 12.3 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 117 Lipase_GDSL PF00657.22 NODE_56138_length_304_cov_349.553903_g48201_i0reverse_frame_2 - 0.16 11.9 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase IMUP PF15761.5 NODE_56137_length_304_cov_375.598513_g48200_i0reverse_frame_3 - 0.064 14.0 3.6 0.079 13.7 3.6 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF5644 PF18712.1 NODE_56136_length_304_cov_403.260223_g48199_i0reverse_frame_3 - 0.0025 17.8 2.8 0.0032 17.4 2.8 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5644) Ephrin PF00812.17 NODE_56136_length_304_cov_403.260223_g48199_i0forward_frame_3 - 0.15 12.0 3.3 0.19 11.7 3.2 1.3 1 1 0 1 1 1 0 Ephrin HIM1 PF08732.10 NODE_56136_length_304_cov_403.260223_g48199_i0forward_frame_2 - 0.03 13.9 1.7 0.037 13.5 1.7 1.1 1 0 0 1 1 1 0 HIM1 GatD_N PF18195.1 NODE_56135_length_304_cov_963.074349_g42389_i1reverse_frame_2 - 0.2 11.0 0.0 0.32 10.3 0.0 1.3 1 0 0 1 1 1 0 GatD N-terminal domain zf-Tim10_DDP PF02953.15 NODE_56135_length_304_cov_963.074349_g42389_i1forward_frame_3 - 0.027 14.1 1.9 0.061 13.0 1.9 1.6 1 1 1 2 2 2 0 Tim10/DDP family zinc finger GST_N_3 PF13417.6 NODE_56132_length_305_cov_1.122222_g48196_i0forward_frame_2 - 1.2e-05 25.6 0.0 1.8e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 NODE_56132_length_305_cov_1.122222_g48196_i0forward_frame_2 - 1.6e-05 25.2 0.0 2.2e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 NODE_56132_length_305_cov_1.122222_g48196_i0forward_frame_2 - 5.6e-05 23.4 0.0 8.6e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 NODE_56132_length_305_cov_1.122222_g48196_i0forward_frame_2 - 0.12 13.2 0.0 0.13 13.0 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain SH3_19 PF18597.1 NODE_56128_length_305_cov_1.233333_g48192_i0reverse_frame_2 - 0.17 11.7 0.1 0.26 11.2 0.1 1.2 1 0 0 1 1 1 0 Myosin X N-terminal SH3 domain V-set_2 PF15910.5 NODE_56125_length_305_cov_1.366667_g48189_i0forward_frame_2 - 0.015 15.4 0.2 0.02 15.0 0.2 1.2 1 0 0 1 1 1 0 ICOS V-set domain Clathrin_bdg PF15045.6 NODE_56125_length_305_cov_1.366667_g48189_i0forward_frame_2 - 0.068 13.2 0.0 0.086 12.9 0.0 1.2 1 0 0 1 1 1 0 Clathrin-binding box of Aftiphilin, vesicle trafficking zf-P11 PF03854.14 NODE_56122_length_305_cov_1.477778_g48186_i0reverse_frame_3 - 0.076 12.7 0.9 0.076 12.7 0.9 2.0 3 1 0 3 3 3 0 P-11 zinc finger Toxin_16 PF07945.11 NODE_56121_length_305_cov_1.481481_g48185_i0reverse_frame_3 - 0.095 12.6 7.0 1.9 8.5 0.9 2.7 2 0 0 2 2 2 0 Janus-atracotoxin Mn_catalase PF05067.12 NODE_56115_length_305_cov_1.711111_g48179_i0reverse_frame_3 - 0.084 11.8 0.0 0.097 11.6 0.0 1.0 1 0 0 1 1 1 0 Manganese containing catalase DUF1451 PF07295.11 NODE_56115_length_305_cov_1.711111_g48179_i0forward_frame_2 - 0.15 12.1 0.0 0.67 10.0 0.2 1.7 2 0 0 2 2 2 0 Zinc-ribbon containing domain DUF1664 PF07889.12 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.012 15.6 1.1 0.016 15.2 1.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) TMF_DNA_bd PF12329.8 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.015 15.3 0.8 0.015 15.3 0.8 1.9 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF2390 PF09523.10 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.018 15.4 0.5 1.1 9.7 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2390) DUF2508 PF10704.9 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.058 13.6 1.6 0.058 13.6 1.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2508) Phage_Mu_Gam PF07352.12 NODE_56113_length_305_cov_1.737037_g48177_i0forward_frame_2 - 0.49 10.3 7.0 0.13 12.1 1.8 1.9 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein ABC_tran PF00005.27 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 1.7e-07 31.8 0.0 2.9e-07 31.1 0.0 1.5 2 0 0 2 2 1 1 ABC transporter AAA_23 PF13476.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00014 22.5 0.1 0.0002 22.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00032 20.8 0.0 0.00055 20.0 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00035 20.5 0.0 0.00041 20.3 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00045 20.5 0.0 0.00058 20.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00083 19.3 0.0 0.00091 19.2 0.0 1.1 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA PF00004.29 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.00088 19.7 0.0 0.0011 19.3 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.0023 17.4 0.0 0.0027 17.2 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SRPRB PF09439.10 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.0025 17.3 0.0 0.0032 16.9 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit NB-ARC PF00931.22 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.0025 17.0 0.0 0.003 16.8 0.0 1.1 1 0 0 1 1 1 1 NB-ARC domain AAA_21 PF13304.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.003 17.4 0.0 0.0037 17.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system TsaE PF02367.17 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.0033 17.4 0.0 0.004 17.2 0.0 1.2 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.006 17.1 0.0 0.008 16.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain Parvo_NS1 PF01057.17 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.009 15.1 0.0 0.011 14.8 0.0 1.1 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 cobW PF02492.19 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.019 14.5 0.0 0.023 14.3 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.02 15.3 0.0 0.023 15.1 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain PduV-EutP PF10662.9 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.021 14.6 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_29 PF13555.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.028 14.2 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_19 PF13245.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.03 14.7 0.0 0.043 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.031 14.2 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 NACHT domain AAA_7 PF12775.7 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.031 13.8 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region GTP_EFTU PF00009.27 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.031 13.8 0.0 0.051 13.1 0.0 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Bac_DnaA PF00308.18 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.032 14.1 0.0 0.04 13.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein RNA_helicase PF00910.22 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.035 14.5 0.0 0.061 13.7 0.0 1.5 2 0 0 2 2 1 0 RNA helicase AAA_28 PF13521.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.038 14.2 0.0 0.045 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain RuvB_N PF05496.12 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.041 13.6 0.0 0.044 13.5 0.0 1.1 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.054 13.5 0.0 0.07 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.054 12.6 0.0 0.057 12.5 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_15 PF13175.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.054 13.2 0.1 0.061 13.0 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain IstB_IS21 PF01695.17 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.063 13.0 0.0 0.063 13.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein NTPase_1 PF03266.15 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.069 13.1 0.1 0.094 12.6 0.1 1.2 1 0 0 1 1 1 0 NTPase Rad17 PF03215.15 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.072 13.0 0.0 0.085 12.8 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_27 PF13514.6 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.088 12.4 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_PrkA PF08298.11 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.092 11.6 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 PrkA AAA domain Roc PF08477.13 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.099 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.11 12.5 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Dynamin family dNK PF01712.19 NODE_56108_length_305_cov_1.881481_g48172_i0reverse_frame_2 - 0.13 12.0 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 Deoxynucleoside kinase RINGv PF12906.7 NODE_56106_length_305_cov_1.885185_g48170_i0reverse_frame_3 - 6e-06 26.3 15.4 8.8e-06 25.8 15.4 1.3 1 0 0 1 1 1 1 RING-variant domain zf-RING_2 PF13639.6 NODE_56106_length_305_cov_1.885185_g48170_i0reverse_frame_3 - 2.2 8.7 17.5 4.1 7.8 17.5 1.5 1 1 0 1 1 1 0 Ring finger domain PRA1 PF03208.19 NODE_56105_length_305_cov_1.907407_g48169_i0forward_frame_3 - 0.62 9.7 7.6 0.71 9.5 7.6 1.0 1 0 0 1 1 1 0 PRA1 family protein DUF5489 PF17592.2 NODE_56103_length_305_cov_2.114815_g48167_i0reverse_frame_3 - 0.15 12.6 0.8 0.2 12.2 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5489) ASC PF00858.24 NODE_56103_length_305_cov_2.114815_g48167_i0forward_frame_2 - 1.9 7.4 6.8 2.3 7.1 6.8 1.0 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel NUC202 PF08166.12 NODE_56102_length_305_cov_2.196296_g48166_i0reverse_frame_2 - 0.35 11.0 3.0 14 5.9 0.2 2.2 1 1 1 2 2 2 0 NUC202 domain Filament PF00038.21 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.023 14.3 13.2 0.026 14.1 13.2 1.0 1 0 0 1 1 1 0 Intermediate filament protein DUF1664 PF07889.12 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.033 14.2 5.1 0.036 14.1 4.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) SlyX PF04102.12 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.033 14.8 2.5 0.033 14.8 2.5 2.0 2 0 0 2 2 2 0 SlyX FlaC_arch PF05377.11 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.074 13.5 3.4 0.11 12.9 1.9 2.0 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) TcpS PF17456.2 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.14 12.2 4.6 0.15 12.1 4.6 1.2 1 0 0 1 1 1 0 Toxin-coregulated pilus protein S Spc7 PF08317.11 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.16 10.9 16.1 0.17 10.7 16.1 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein CENP-H PF05837.12 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.19 12.2 13.1 0.24 11.8 13.1 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Remorin_C PF03763.13 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.21 11.5 14.2 1.2 9.1 14.2 1.9 1 1 0 1 1 1 0 Remorin, C-terminal region PapC_N PF13954.6 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.23 11.5 3.1 0.28 11.2 3.1 1.1 1 0 0 1 1 1 0 PapC N-terminal domain ApoO PF09769.9 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.68 9.9 2.5 0.58 10.1 0.6 1.7 1 1 1 2 2 2 0 Apolipoprotein O ACR_tran PF00873.19 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 0.79 7.3 4.3 0.84 7.2 4.3 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family Mit_KHE1 PF10173.9 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 1 9.4 6.1 2.1 8.4 6.1 1.7 1 1 0 1 1 1 0 Mitochondrial K+-H+ exchange-related DUF5093 PF17011.5 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 2.1 8.7 8.7 3.7 7.8 3.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5093) ALMT PF11744.8 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 2.1 7.1 7.9 2.4 6.9 7.9 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter DUF4094 PF13334.6 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 3.6 8.1 9.5 0.64 10.5 3.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) DUF2570 PF10828.8 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 3.7 7.4 14.3 3.5e+02 1.0 14.3 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) TMPIT PF07851.13 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 3.7 6.7 9.6 4.4 6.4 9.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein Atg14 PF10186.9 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 4.4 6.3 13.4 4.6 6.2 13.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 HSP70 PF00012.20 NODE_56100_length_305_cov_2.274074_g48164_i0reverse_frame_2 - 5.2 5.1 10.6 5.8 5.0 10.6 1.0 1 0 0 1 1 1 0 Hsp70 protein Kinase-PPPase PF03618.14 NODE_56087_length_305_cov_3.170370_g48151_i0reverse_frame_3 - 1.4e-29 103.7 0.0 1.5e-29 103.6 0.0 1.0 1 0 0 1 1 1 1 Kinase/pyrophosphorylase 2Fe-2S_Ferredox PF11591.8 NODE_56087_length_305_cov_3.170370_g48151_i0forward_frame_2 - 0.0031 17.3 0.0 0.58 10.1 0.0 2.7 2 0 0 2 2 2 2 Ferredoxin chloroplastic transit peptide UFD1 PF03152.14 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_3 - 0.14 11.6 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 YfaZ PF07437.11 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 7.8e-46 156.0 4.3 8.6e-46 155.8 4.3 1.0 1 0 0 1 1 1 1 YfaZ precursor OMP_b-brl PF13505.6 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.00085 19.5 2.6 0.041 14.0 0.1 2.1 1 1 1 2 2 2 2 Outer membrane protein beta-barrel domain LptD PF04453.14 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.0034 16.7 0.1 0.0039 16.5 0.1 1.0 1 0 0 1 1 1 1 LPS transport system D Porin_4 PF13609.6 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.0068 16.2 2.7 0.0073 16.1 2.7 1.1 1 0 0 1 1 1 1 Gram-negative porin BBP2_2 PF10082.9 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.017 14.0 0.1 0.12 11.2 0.0 1.9 1 1 1 2 2 2 0 Putative beta-barrel porin 2 Alpha-amyl_C2 PF07821.12 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.017 15.3 0.1 0.027 14.7 0.1 1.2 1 0 0 1 1 1 0 Alpha-amylase C-terminal beta-sheet domain YjbH PF06082.11 NODE_56086_length_305_cov_3.207407_g48150_i0forward_frame_2 - 0.085 11.7 0.3 0.1 11.4 0.3 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH Aa_trans PF01490.18 NODE_56084_length_305_cov_4.681481_g48148_i0reverse_frame_2 - 0.0072 15.1 4.8 0.0072 15.1 4.8 1.3 2 0 0 2 2 2 1 Transmembrane amino acid transporter protein MWFE PF15879.5 NODE_56084_length_305_cov_4.681481_g48148_i0reverse_frame_2 - 0.58 10.4 2.0 4.3 7.6 1.4 2.1 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase MWFE subunit DUF2768 PF10966.8 NODE_56077_length_305_cov_52.800000_g48141_i0forward_frame_3 - 0.037 14.5 5.3 0.062 13.7 5.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2768) H2O2_YaaD PF03883.14 NODE_56075_length_305_cov_54.870370_g48139_i0forward_frame_2 - 0.0018 17.9 0.0 0.0027 17.3 0.0 1.3 1 0 0 1 1 1 1 Peroxide stress protein YaaA RNA_polI_A34 PF08208.11 NODE_56075_length_305_cov_54.870370_g48139_i0forward_frame_2 - 0.51 10.4 16.7 0.6 10.2 16.7 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 MAP17 PF15807.5 NODE_56075_length_305_cov_54.870370_g48139_i0forward_frame_2 - 8 6.7 7.3 10 6.3 7.3 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 CarbpepA_inh PF02977.15 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_2 - 0.27 11.0 8.1 2.5 8.0 1.6 2.6 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor ShK PF01549.24 NODE_56074_length_305_cov_55.711111_g48138_i0reverse_frame_2 - 0.56 10.8 8.7 8.5 7.0 3.5 3.4 3 0 0 3 3 3 0 ShK domain-like Polyoma_lg_T_C PF06431.11 NODE_56072_length_305_cov_58.244444_g48136_i0reverse_frame_3 - 0.0033 16.3 0.1 0.004 16.1 0.1 1.0 1 0 0 1 1 1 1 Polyomavirus large T antigen C-terminus DUF4312 PF14189.6 NODE_56072_length_305_cov_58.244444_g48136_i0forward_frame_2 - 0.46 10.5 0.1 0.46 10.5 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4312) DUF1816 PF08846.10 NODE_56071_length_305_cov_59.485185_g48135_i0forward_frame_3 - 0.023 14.7 0.5 0.037 14.0 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1816) Ribosomal_L37e PF01907.19 NODE_56070_length_305_cov_60.977778_g48134_i0reverse_frame_3 - 0.017 15.3 1.4 0.017 15.3 1.4 1.9 2 0 0 2 2 2 0 Ribosomal protein L37e RecR PF02132.15 NODE_56067_length_305_cov_64.092593_g48131_i0forward_frame_3 - 0.055 13.0 1.8 0.17 11.5 1.8 1.7 1 1 0 1 1 1 0 RecR protein YjfB_motility PF14070.6 NODE_56067_length_305_cov_64.092593_g48131_i0forward_frame_3 - 0.28 11.4 2.6 0.41 10.8 2.6 1.2 1 0 0 1 1 1 0 Putative motility protein Acyl_transf_3 PF01757.22 NODE_56063_length_305_cov_70.092593_g48127_i0reverse_frame_2 - 0.11 11.5 1.7 0.12 11.4 1.7 1.0 1 0 0 1 1 1 0 Acyltransferase family PPR_2 PF13041.6 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 1.4e-12 47.6 0.0 2e-05 24.7 0.0 3.0 1 1 2 3 3 3 3 PPR repeat family PPR PF01535.20 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 2.7e-10 39.8 0.0 0.00051 20.1 0.0 2.9 3 0 0 3 3 3 2 PPR repeat PPR_1 PF12854.7 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 0.00028 20.5 0.0 0.05 13.3 0.0 2.4 2 0 0 2 2 2 2 PPR repeat PPR_long PF17177.4 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 0.004 16.6 0.0 0.0047 16.3 0.0 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 0.007 16.4 0.0 0.066 13.3 0.0 2.0 1 1 0 2 2 2 1 Pentatricopeptide repeat domain Clathrin PF00637.20 NODE_56063_length_305_cov_70.092593_g48127_i0forward_frame_3 - 0.14 12.0 0.0 7.2 6.5 0.0 2.1 1 1 0 2 2 2 0 Region in Clathrin and VPS Adeno_E4_34 PF04528.13 NODE_56061_length_305_cov_72.088889_g48125_i0reverse_frame_2 - 0.14 12.0 0.7 0.18 11.6 0.7 1.2 1 0 0 1 1 1 0 Adenovirus early E4 34 kDa protein conserved region BCMA-Tall_bind PF09257.10 NODE_56054_length_305_cov_90.596296_g48118_i0reverse_frame_3 - 0.08 13.0 0.4 0.08 13.0 0.4 3.1 2 1 1 3 3 3 0 BCMA, TALL-1 binding Glyc_hyd_38C_2 PF18230.1 NODE_56053_length_305_cov_92.681481_g48117_i0forward_frame_2 - 0.051 13.7 0.4 0.49 10.5 0.1 2.0 1 1 1 2 2 2 0 Glycosyl hydrolases family 38 C-terminal sub-domain DUF1152 PF06626.12 NODE_56051_length_305_cov_111.025926_g48115_i0forward_frame_2 - 0.14 11.3 0.0 0.15 11.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1152) Imm17 PF15562.6 NODE_56049_length_305_cov_141.340741_g48113_i0reverse_frame_2 - 0.16 11.8 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 17 zf-RING_6 PF14835.6 NODE_56048_length_305_cov_147.362963_g48112_i0reverse_frame_2 - 0.28 11.1 6.5 0.48 10.3 2.3 2.2 1 1 1 2 2 2 0 zf-RING of BARD1-type protein Alg14 PF08660.11 NODE_56047_length_305_cov_230.455556_g48111_i0forward_frame_2 - 8.1e-06 25.9 0.0 1.4e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 Oligosaccharide biosynthesis protein Alg14 like DUF3481 PF11980.8 NODE_56047_length_305_cov_230.455556_g48111_i0forward_frame_2 - 0.031 14.0 0.9 0.045 13.5 0.6 1.5 1 1 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein TssO PF17561.2 NODE_56047_length_305_cov_230.455556_g48111_i0forward_frame_2 - 1 9.4 7.1 0.23 11.5 3.8 1.5 2 0 0 2 2 2 0 Type VI secretion system, TssO Diedel PF13164.6 NODE_56045_length_305_cov_242.448148_g48109_i0forward_frame_3 - 0.011 16.2 0.7 0.015 15.7 0.7 1.3 1 0 0 1 1 1 0 Diedel Ycf15 PF10705.9 NODE_56041_length_305_cov_305.562963_g48105_i0reverse_frame_3 - 0.0052 16.9 0.1 0.0074 16.4 0.1 1.2 1 0 0 1 1 1 1 Chloroplast protein precursor Ycf15 putative DUF4817 PF16087.5 NODE_56041_length_305_cov_305.562963_g48105_i0forward_frame_3 - 0.18 11.6 0.4 0.52 10.2 0.5 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain (DUF4817) PMI_typeI PF01238.21 NODE_56041_length_305_cov_305.562963_g48105_i0forward_frame_2 - 0.059 12.5 0.0 0.073 12.3 0.0 1.1 1 0 0 1 1 1 0 Phosphomannose isomerase type I Pertus-S5-tox PF09276.10 NODE_56034_length_306_cov_0.911439_g48098_i0forward_frame_2 - 0.061 13.4 0.0 0.089 12.9 0.0 1.3 1 0 0 1 1 1 0 Pertussis toxin S5 subunit SRR1 PF07985.12 NODE_56033_length_306_cov_0.992620_g48097_i0reverse_frame_3 - 0.11 12.6 0.3 0.21 11.6 0.3 1.5 1 0 0 1 1 1 0 SRR1 DUF4449 PF14613.6 NODE_56032_length_306_cov_1.029520_g48096_i0reverse_frame_3 - 0.27 11.3 0.6 0.32 11.1 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) HEPN_RES_NTD1 PF18870.1 NODE_56032_length_306_cov_1.029520_g48096_i0forward_frame_2 - 0.014 15.6 0.2 0.024 14.8 0.2 1.3 1 0 0 1 1 1 0 HEPN/RES N-terminal domain 1 PLD_C PF12357.8 NODE_56032_length_306_cov_1.029520_g48096_i0forward_frame_2 - 0.092 12.7 0.0 0.29 11.1 0.0 1.7 2 0 0 2 2 2 0 Phospholipase D C terminal REF PF05755.12 NODE_56025_length_306_cov_1.328413_g48089_i0forward_frame_3 - 0.053 13.3 0.0 0.064 13.1 0.0 1.2 1 0 0 1 1 1 0 Rubber elongation factor protein (REF) Phe_ZIP PF08916.11 NODE_56025_length_306_cov_1.328413_g48089_i0forward_frame_3 - 0.062 14.0 0.0 0.11 13.2 0.0 1.4 1 0 0 1 1 1 0 Phenylalanine zipper CBM_14 PF01607.24 NODE_56024_length_306_cov_1.431734_g48088_i0forward_frame_3 - 1.4 9.2 5.4 1.8 8.8 2.0 2.2 1 1 1 2 2 2 0 Chitin binding Peritrophin-A domain E1-E2_ATPase PF00122.20 NODE_56022_length_306_cov_1.468635_g48086_i0forward_frame_3 - 0.68 9.4 3.0 0.84 9.1 3.0 1.2 1 0 0 1 1 1 0 E1-E2 ATPase DUF2244 PF10003.9 NODE_56022_length_306_cov_1.468635_g48086_i0forward_frame_3 - 0.97 9.1 3.2 1.1 8.9 3.2 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) DUF2375 PF09558.10 NODE_56021_length_306_cov_1.476015_g48085_i0reverse_frame_3 - 0.073 13.1 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2375) TMEM234 PF10639.9 NODE_56021_length_306_cov_1.476015_g48085_i0reverse_frame_3 - 0.097 12.7 0.7 0.11 12.5 0.7 1.1 1 0 0 1 1 1 0 Putative transmembrane family 234 Glyco_transf_24 PF18404.1 NODE_56021_length_306_cov_1.476015_g48085_i0reverse_frame_2 - 0.042 13.3 0.4 0.05 13.0 0.4 1.0 1 0 0 1 1 1 0 Glucosyltransferase 24 Prolamin_like PF05617.11 NODE_56021_length_306_cov_1.476015_g48085_i0forward_frame_2 - 0.0036 17.4 4.2 0.0093 16.1 4.2 1.6 1 0 0 1 1 1 1 Prolamin-like ABC_tran PF00005.27 NODE_56019_length_306_cov_1.501845_g48083_i0reverse_frame_2 - 3.3e-05 24.4 0.0 5.4e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_56019_length_306_cov_1.501845_g48083_i0reverse_frame_2 - 0.0086 15.9 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF4230 PF14014.6 NODE_56015_length_306_cov_1.664207_g48079_i0forward_frame_3 - 0.038 14.2 0.7 0.051 13.9 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4230) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks263.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks263.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks263.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks263.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- KdpA PF03814.15 NODE_56012_length_306_cov_1.830258_g48076_i0forward_frame_3 - 0.054 11.7 0.1 0.061 11.5 0.1 1.0 1 0 0 1 1 1 0 Potassium-transporting ATPase A subunit Herpes_UL36 PF03586.13 NODE_56012_length_306_cov_1.830258_g48076_i0forward_frame_2 - 0.098 12.0 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL36 tegument protein Vut_1 PF02592.15 NODE_56009_length_306_cov_1.915129_g48073_i0forward_frame_2 - 0.029 14.7 0.4 0.035 14.4 0.4 1.1 1 0 0 1 1 1 0 Putative vitamin uptake transporter zinc_ribbon_9 PF14369.6 NODE_56005_length_306_cov_2.110701_g48069_i0forward_frame_2 - 0.0056 16.9 1.8 1.7 9.0 0.5 2.5 2 0 0 2 2 2 2 zinc-ribbon TMEM52 PF14979.6 NODE_56004_length_306_cov_2.110701_g48068_i0reverse_frame_3 - 0.017 15.0 4.2 0.017 15.0 4.2 1.5 2 0 0 2 2 2 0 Transmembrane 52 Cellulose_synt PF03552.14 NODE_56004_length_306_cov_2.110701_g48068_i0forward_frame_3 - 0.1 11.1 0.6 0.11 10.9 0.6 1.0 1 0 0 1 1 1 0 Cellulose synthase HlyD_3 PF13437.6 NODE_56002_length_306_cov_2.166052_g48066_i0forward_frame_2 - 0.036 14.8 0.4 0.047 14.4 0.4 1.3 1 0 0 1 1 1 0 HlyD family secretion protein DUF3517 PF12030.8 NODE_56000_length_306_cov_2.221402_g48064_i0reverse_frame_3 - 0.0089 15.0 0.4 0.01 14.8 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3517) Zip PF02535.22 NODE_55994_length_306_cov_2.380074_g48058_i0reverse_frame_2 - 0.13 11.5 0.6 0.14 11.4 0.6 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF2207 PF09972.9 NODE_55994_length_306_cov_2.380074_g48058_i0forward_frame_3 - 0.39 9.4 4.9 0.42 9.3 4.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Pox_I5 PF04713.12 NODE_55992_length_306_cov_2.457565_g48056_i0reverse_frame_3 - 0.026 14.5 0.3 0.046 13.8 0.3 1.4 1 0 0 1 1 1 0 Poxvirus protein I5 DUF2626 PF11117.8 NODE_55992_length_306_cov_2.457565_g48056_i0reverse_frame_3 - 0.077 13.7 1.5 0.13 13.0 1.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2626) MutS_II PF05188.17 NODE_55992_length_306_cov_2.457565_g48056_i0forward_frame_3 - 0.0092 16.3 0.0 0.012 15.9 0.0 1.1 1 0 0 1 1 1 1 MutS domain II Pax7 PF12360.8 NODE_55985_length_306_cov_2.678967_g48049_i0forward_frame_3 - 0.12 12.6 3.3 0.22 11.7 3.3 1.5 1 0 0 1 1 1 0 Paired box protein 7 DeoC PF01791.9 NODE_55979_length_306_cov_3.025830_g48043_i0reverse_frame_3 - 0.18 11.4 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 DeoC/LacD family aldolase Acetyltransf_16 PF05301.11 NODE_55979_length_306_cov_3.025830_g48043_i0reverse_frame_2 - 0.018 14.8 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 DUF2057 PF09829.9 NODE_55975_length_306_cov_3.276753_g48039_i0reverse_frame_2 - 2.5e-22 80.0 0.1 2.7e-22 79.9 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2057) DotU PF09850.9 NODE_55973_length_306_cov_3.335793_g48037_i0forward_frame_2 - 0.059 13.1 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 Type VI secretion system protein DotU TMEM154 PF15102.6 NODE_55973_length_306_cov_3.335793_g48037_i0forward_frame_2 - 0.092 12.6 0.2 0.1 12.5 0.2 1.2 1 0 0 1 1 1 0 TMEM154 protein family US6 PF17616.2 NODE_55971_length_306_cov_3.487085_g48035_i0forward_frame_3 - 0.06 13.3 0.1 0.084 12.8 0.1 1.2 1 0 0 1 1 1 0 Viral unique short region 6 IL3Ra_N PF18611.1 NODE_55970_length_306_cov_3.520295_g48034_i0reverse_frame_3 - 0.3 11.1 4.1 0.44 10.6 4.1 1.2 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain DUF3211 PF11485.8 NODE_55970_length_306_cov_3.520295_g48034_i0reverse_frame_2 - 0.048 13.9 0.0 0.053 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3211) CTU2 PF10288.9 NODE_55966_length_306_cov_17.501845_g48030_i0reverse_frame_3 - 0.19 12.0 4.0 0.25 11.6 4.0 1.1 1 0 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 DUF1653 PF07866.11 NODE_55963_length_306_cov_40.416974_g48027_i0reverse_frame_3 - 0.054 13.8 0.2 0.078 13.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1653) Vpu PF00558.19 NODE_55963_length_306_cov_40.416974_g48027_i0reverse_frame_3 - 0.089 12.6 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Vpu protein Herpes_UL33 PF03581.13 NODE_55963_length_306_cov_40.416974_g48027_i0reverse_frame_2 - 0.12 12.7 0.4 0.2 12.0 0.3 1.4 1 1 0 1 1 1 0 Herpesvirus UL33-like protein Dzip-like_N PF13815.6 NODE_55961_length_306_cov_48.819188_g48025_i0reverse_frame_3 - 0.14 12.1 1.6 1.5 8.8 0.3 2.1 1 1 1 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal Kelch_6 PF13964.6 NODE_55960_length_306_cov_49.690037_g48024_i0forward_frame_2 - 0.071 13.4 0.1 0.11 12.8 0.1 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_1 PF01344.25 NODE_55960_length_306_cov_49.690037_g48024_i0forward_frame_2 - 0.14 11.8 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Kelch motif YqfQ PF14181.6 NODE_55956_length_306_cov_55.173432_g48020_i0reverse_frame_2 - 5.9 7.0 10.4 25 5.0 10.4 1.8 1 1 0 1 1 1 0 YqfQ-like protein Izumo-Ig PF16706.5 NODE_55954_length_306_cov_58.815498_g48018_i0reverse_frame_3 - 0.15 12.1 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain Drf_FH3 PF06367.16 NODE_55951_length_306_cov_67.767528_g48015_i0forward_frame_3 - 0.15 11.7 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Diaphanous FH3 Domain DUF1964 PF09244.10 NODE_55950_length_306_cov_69.335793_g48014_i0forward_frame_3 - 0.25 11.8 0.0 0.32 11.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1964) Phlebovirus_G1 PF07243.11 NODE_55944_length_306_cov_81.701107_g48008_i0reverse_frame_2 - 2.1 6.6 7.5 2.4 6.4 7.5 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 TetR_C_1 PF02909.17 NODE_55944_length_306_cov_81.701107_g48008_i0forward_frame_3 - 0.027 14.3 0.1 1.8 8.4 0.2 2.0 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Peptidase_S64 PF08192.11 NODE_55944_length_306_cov_81.701107_g48008_i0forward_frame_3 - 0.034 12.7 4.3 0.035 12.6 4.3 1.0 1 0 0 1 1 1 0 Peptidase family S64 Rod_C PF10493.9 NODE_55944_length_306_cov_81.701107_g48008_i0forward_frame_3 - 0.15 10.4 3.7 0.17 10.2 3.7 1.0 1 0 0 1 1 1 0 Rough deal protein C-terminal region RPA43_OB PF17875.1 NODE_55944_length_306_cov_81.701107_g48008_i0forward_frame_3 - 0.22 12.2 2.7 0.24 12.0 2.7 1.2 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I TAXi_N PF14543.6 NODE_55938_length_306_cov_101.575646_g48002_i0reverse_frame_3 - 1 9.6 5.3 1.2 9.4 5.3 1.1 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal HTH_29 PF13551.6 NODE_55935_length_306_cov_119.557196_g47999_i0reverse_frame_2 - 0.029 14.4 0.8 0.044 13.8 0.8 1.3 1 0 0 1 1 1 0 Winged helix-turn helix COA2 PF17051.5 NODE_55935_length_306_cov_119.557196_g47999_i0forward_frame_2 - 0.17 11.9 0.2 0.39 10.8 0.2 1.6 2 0 0 2 2 2 0 Cytochrome C oxidase assembly factor 2 PHD_3 PF13922.6 NODE_55932_length_306_cov_131.409594_g47996_i0forward_frame_2 - 0.047 14.1 2.1 0.056 13.8 1.1 1.8 1 1 1 2 2 2 0 PHD domain of transcriptional enhancer, Asx Rep_1 PF01446.17 NODE_55929_length_306_cov_142.527675_g46748_i1forward_frame_2 - 0.0061 16.1 1.5 0.0072 15.8 1.5 1.1 1 0 0 1 1 1 1 Replication protein Zn_Tnp_IS91 PF14319.6 NODE_55929_length_306_cov_142.527675_g46748_i1forward_frame_2 - 0.025 14.6 2.2 0.031 14.3 1.5 1.6 2 0 0 2 2 2 0 Transposase zinc-binding domain Cys_box PF17869.1 NODE_55926_length_306_cov_159.195572_g47991_i0reverse_frame_2 - 0.076 13.2 5.2 0.98 9.6 0.4 2.2 1 1 1 2 2 2 0 Anosmin cysteine rich domain FAM178 PF14816.6 NODE_55926_length_306_cov_159.195572_g47991_i0forward_frame_2 - 0.16 10.9 0.0 0.2 10.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function, FAM178 DUF4716 PF15837.5 NODE_55924_length_306_cov_183.564576_g47989_i0reverse_frame_3 - 0.13 12.4 0.2 0.28 11.3 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) ENOD40 PF08247.11 NODE_55921_length_306_cov_216.276753_g47986_i0reverse_frame_3 - 3 8.0 5.7 38 4.6 5.7 2.5 1 1 0 1 1 1 0 ENOD40 protein Clat_adaptor_s PF01217.20 NODE_55916_length_306_cov_999.785978_g47981_i0reverse_frame_3 - 1.6e-11 44.3 0.3 1.6e-11 44.3 0.3 1.6 2 0 0 2 2 2 1 Clathrin adaptor complex small chain PIN_10 PF18478.1 NODE_55916_length_306_cov_999.785978_g47981_i0reverse_frame_2 - 0.072 13.3 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 PIN like domain zf-C2H2_7 PF15269.6 NODE_55915_length_306_cov_1117.250923_g47980_i0forward_frame_3 - 0.0051 16.9 0.0 0.011 15.8 0.0 1.6 1 0 0 1 1 1 1 Zinc-finger Adeno_E3_CR2 PF02439.15 NODE_55911_length_306_cov_20615.365314_g47976_i0reverse_frame_2 - 0.56 10.0 5.3 5.1 6.9 1.4 2.3 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 BolA PF01722.18 ORF99722 - 3.1e-15 56.2 0.2 9e-14 51.5 0.2 2.1 1 1 0 1 1 1 1 BolA-like protein TcdA_TcdB_pore PF12920.7 ORF99722 - 0.032 12.5 0.0 0.039 12.2 0.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF3425 PF11905.8 ORF99722 - 0.086 12.8 0.0 0.097 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) zf-CCCH PF00642.24 ORF99540 - 0.45 10.5 4.1 0.45 10.5 0.9 2.1 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Nterm_IS4 PF13006.7 ORF98965 - 0.079 13.2 2.8 0.056 13.6 1.3 1.6 1 1 1 2 2 2 0 Insertion element 4 transposase N-terminal K_channel_TID PF07941.11 ORF98965 - 3.5 8.1 8.5 0.51 10.8 1.0 2.2 1 1 1 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain FAD_binding_1 PF00667.20 ORF98806 - 0.2 11.2 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain DUF5329 PF17263.2 ORF98785 - 0.028 14.6 0.4 0.031 14.4 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5329) PAG PF15347.6 ORF98155 - 0.086 11.8 0.1 0.094 11.7 0.1 1.1 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched EF-hand_1 PF00036.32 ORF98100 - 6.2e-11 41.0 2.5 2.7e-05 23.4 0.4 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF98100 - 7.1e-11 42.4 1.2 9.2e-11 42.1 1.2 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF98100 - 7.1e-10 37.9 1.5 1.1e-05 24.7 0.1 2.5 2 1 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF98100 - 1.9e-08 33.6 0.7 0.0079 16.1 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF98100 - 0.00046 20.5 1.7 0.0014 19.0 1.7 1.7 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Stork_head PF10264.9 ORF98100 - 0.0011 19.1 0.0 0.0016 18.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix Storkhead-box1 domain EF-hand_8 PF13833.6 ORF98100 - 0.0048 16.7 0.7 0.42 10.5 0.1 2.3 1 1 0 2 2 2 1 EF-hand domain pair DUF1007 PF06226.13 ORF98100 - 0.015 15.3 1.2 1.7 8.6 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1007) GNAT_acetyltran PF12746.7 ORF98100 - 0.023 14.3 0.6 0.025 14.1 0.6 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase Peptidase_C69 PF03577.15 ORF98100 - 0.047 12.6 0.1 0.056 12.4 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C69 MbtH PF03621.13 ORF96796 - 0.0078 15.6 0.1 0.015 14.7 0.1 1.5 1 0 0 1 1 1 1 MbtH-like protein Crystallin PF00525.18 ORF96518 - 0.11 12.7 1.9 11 6.2 0.4 2.3 2 0 0 2 2 2 0 Alpha crystallin A chain, N terminal DUF3263 PF11662.8 ORF96518 - 6.2 6.7 7.1 20 5.1 2.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3263) Antimicrobial22 PF16047.5 ORF96104 - 0.25 11.2 5.1 0.42 10.5 0.4 2.6 2 0 0 2 2 2 0 Frog antimicrobial peptide DUF3087 PF11286.8 ORF95508 - 0.077 12.5 0.1 0.095 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) TC1 PF15063.6 ORF93578 - 0.079 12.8 0.0 0.19 11.6 0.0 1.6 2 0 0 2 2 2 0 Thyroid cancer protein 1 CHDCT2 PF08074.11 ORF93578 - 0.16 12.2 2.2 0.32 11.1 2.2 1.6 1 1 0 1 1 1 0 CHDCT2 (NUC038) domain ATP-synt_D PF01813.17 ORF93446 - 0.019 14.8 0.4 0.025 14.4 0.4 1.1 1 0 0 1 1 1 0 ATP synthase subunit D GASA PF02704.14 ORF92413 - 0.034 14.3 8.8 0.17 12.0 0.4 2.2 2 0 0 2 2 2 0 Gibberellin regulated protein Siva PF05458.12 ORF92413 - 5.9 6.5 9.8 0.98 9.1 4.9 1.9 2 0 0 2 2 2 0 Cd27 binding protein (Siva) Helicase_C PF00271.31 ORF91990 - 0.028 14.8 0.1 0.036 14.4 0.1 1.1 1 0 0 1 1 1 0 Helicase conserved C-terminal domain TRM13 PF05206.14 ORF91912 - 1.2 8.6 3.9 1.2 8.6 3.9 1.1 1 0 0 1 1 1 0 Methyltransferase TRM13 APG12 PF04110.13 ORF91885 - 0.035 14.5 0.4 0.059 13.8 0.4 1.4 1 0 0 1 1 1 0 Ubiquitin-like autophagy protein Apg12 RepB_primase PF16793.5 ORF915 - 0.029 14.5 0.2 0.033 14.3 0.2 1.1 1 0 0 1 1 1 0 RepB DNA-primase from phage plasmid Phytochelatin PF05023.14 ORF91071 - 0.11 11.7 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Phytochelatin synthase XhlA PF10779.9 ORF89401 - 2.1 8.6 4.3 8.5 6.7 2.0 2.2 1 1 1 2 2 2 0 Haemolysin XhlA DUF3858 PF12970.7 ORF89363 - 0.07 13.2 0.7 0.12 12.4 0.7 1.3 1 1 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3858) IRK_C PF17655.1 ORF89008 - 0.085 12.5 0.2 0.11 12.1 0.2 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain FOXP-CC PF16159.5 ORF88560 - 0.076 13.7 1.3 1.5 9.5 0.3 2.2 2 0 0 2 2 2 0 FOXP coiled-coil domain Gliadin PF13016.6 ORF88122 - 0.017 15.5 3.2 0.028 14.8 3.2 1.4 1 0 0 1 1 1 0 Cys-rich Gliadin N-terminal Pectate_lyase PF03211.13 ORF87701 - 0.037 13.6 0.1 0.062 12.8 0.1 1.3 1 1 0 1 1 1 0 Pectate lyase Fusion_gly PF00523.18 ORF87264 - 0.1 10.8 0.3 0.12 10.6 0.3 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0 DUF2009 PF09418.10 ORF86925 - 0.16 11.0 0.0 0.2 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2009) Gemini_AL1_M PF08283.11 ORF85833 - 0.1 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Geminivirus rep protein central domain Imm59 PF15597.6 ORF84566 - 0.014 15.8 0.2 0.02 15.4 0.2 1.3 1 0 0 1 1 1 0 Immunity protein 59 LCE6A PF15858.5 ORF84329 - 0.077 13.8 3.9 0.13 13.1 3.9 1.4 1 1 0 1 1 1 0 Late cornified envelope protein 6A family IRK_C PF17655.1 ORF82720 - 0.085 12.5 0.2 0.11 12.1 0.2 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain B12-binding PF02310.19 ORF82634 - 0.18 11.8 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 B12 binding domain RGS12_us1 PF16613.5 ORF82571 - 0.012 15.9 5.9 0.015 15.6 5.9 1.2 1 0 0 1 1 1 0 Unstructured region of RGS12 AP3D1 PF06375.11 ORF82571 - 0.79 10.0 6.8 1 9.6 6.8 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 XPG_N PF00752.17 ORF80462 - 0.028 14.9 0.1 0.046 14.2 0.1 1.4 1 0 0 1 1 1 0 XPG N-terminal domain CENP-K PF11802.8 ORF80072 - 0.0062 16.1 0.5 0.0068 16.0 0.5 1.0 1 0 0 1 1 1 1 Centromere-associated protein K VID27_N PF17748.1 ORF79542 - 0.055 13.3 0.0 0.078 12.8 0.0 1.2 1 0 0 1 1 1 0 VID27 N-terminal region PheRS_DBD2 PF18554.1 ORF79433 - 0.16 12.0 1.7 3 7.9 0.9 2.3 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Imm59 PF15597.6 ORF78272 - 0.014 15.8 0.2 0.02 15.4 0.2 1.3 1 0 0 1 1 1 0 Immunity protein 59 SID-1_RNA_chan PF13965.6 ORF76932 - 0.081 11.3 2.6 0.089 11.2 2.6 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Granulin PF00396.18 ORF76786 - 0.053 13.9 3.5 0.11 12.9 3.5 1.6 1 1 0 1 1 1 0 Granulin zf-C2H2_4 PF13894.6 ORF76688 - 1.1e-05 25.9 10.3 0.0024 18.5 3.5 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF76688 - 0.0003 21.1 9.9 0.028 14.9 0.6 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_11 PF16622.5 ORF76688 - 0.015 15.0 6.0 0.032 14.0 1.7 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type HHV-1_VABD PF16852.5 ORF76688 - 0.015 15.3 2.4 0.028 14.4 1.8 1.7 2 0 0 2 2 2 0 Herpes viral adaptor-to-host cellular mRNA binding domain FYVE PF01363.21 ORF76688 - 0.069 13.3 2.7 0.12 12.5 2.7 1.4 1 1 0 1 1 1 0 FYVE zinc finger zf-H2C2_2 PF13465.6 ORF76688 - 0.094 13.2 0.4 0.094 13.2 0.4 2.8 3 0 0 3 3 3 0 Zinc-finger double domain DUF3903 PF13043.6 ORF76102 - 0.078 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) BCMA-Tall_bind PF09257.10 ORF76076 - 0.045 13.9 0.1 0.12 12.5 0.1 1.9 1 1 0 1 1 1 0 BCMA, TALL-1 binding CD45 PF12567.8 ORF75837 - 0.39 10.7 5.3 0.3 11.1 3.7 1.7 1 1 1 2 2 2 0 Leukocyte receptor CD45 Somatomedin_B PF01033.17 ORF73423 - 0.51 10.8 9.4 1.3 9.5 9.4 1.8 1 0 0 1 1 1 0 Somatomedin B domain BRCT_3 PF18428.1 ORF72485 - 0.086 12.9 0.0 0.09 12.9 0.0 1.2 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain HSA PF07529.13 ORF72306 - 1.4 9.3 7.2 1.2 9.6 0.5 2.8 2 1 0 2 2 2 0 HSA DUF3903 PF13043.6 ORF72032 - 0.078 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) Transpos_assoc PF13963.6 ORF72024 - 1 9.7 6.9 0.23 11.8 1.5 2.1 1 1 1 2 2 2 0 Transposase-associated domain EF-hand_7 PF13499.6 ORF71665 - 0.064 13.7 1.6 2.3 8.7 1.6 2.2 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF71665 - 0.34 10.5 1.7 4.6 7.0 0.2 2.6 2 0 0 2 2 2 0 EF hand EF-hand_6 PF13405.6 ORF71665 - 1.8 8.7 4.8 19 5.5 0.3 2.6 1 1 1 2 2 2 0 EF-hand domain Plus-3 PF03126.18 ORF71323 - 0.0094 16.5 0.1 0.01 16.3 0.1 1.2 1 0 0 1 1 1 1 Plus-3 domain Lantibiotic_a PF14867.6 ORF71125 - 0.06 13.1 0.4 0.11 12.3 0.4 1.4 1 0 0 1 1 1 0 Lantibiotic alpha DUF2389 PF09493.10 ORF70891 - 0.078 13.6 0.4 0.17 12.5 0.2 1.7 2 0 0 2 2 2 0 Tryptophan-rich protein (DUF2389) Entericidin PF08085.11 ORF70423 - 4.7 7.4 6.7 1.8 8.7 0.2 2.7 3 0 0 3 3 3 0 Entericidin EcnA/B family RCC1_2 PF13540.6 ORF70187 - 9.4e-06 25.3 0.4 0.11 12.4 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF70187 - 0.00014 22.4 0.4 0.018 15.6 0.0 2.5 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat SANTA PF09133.10 ORF70187 - 0.039 14.4 0.0 0.064 13.7 0.0 1.3 1 1 0 1 1 1 0 SANTA (SANT Associated) Glyco_transf_34 PF05637.12 ORF69656 - 0.0092 15.7 0.0 0.0092 15.7 0.0 1.2 1 0 0 1 1 1 1 galactosyl transferase GMA12/MNN10 family SID-1_RNA_chan PF13965.6 ORF69638 - 0.081 11.3 2.6 0.089 11.2 2.6 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 EphA2_TM PF14575.6 ORF69147 - 0.038 14.9 0.0 0.054 14.4 0.0 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF1201 PF06716.11 ORF69147 - 1.4 9.0 9.7 2.7 8.1 9.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1201) DAP10 PF07213.11 ORF68539 - 0.079 12.9 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 DAP10 membrane protein GST_C PF00043.25 ORF67621 - 4.7e-08 33.2 0.0 6.1e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF67621 - 9e-07 28.8 0.1 1.4e-06 28.3 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF67621 - 6.1e-06 26.3 0.0 8e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain HEAT PF02985.22 ORF67621 - 0.0025 17.9 0.2 0.0081 16.3 0.1 2.0 2 0 0 2 2 2 1 HEAT repeat S-antigen PF05756.11 ORF67030 - 1.4 9.4 7.5 1.2 9.6 6.7 1.4 1 1 0 1 1 1 0 S-antigen protein zf-CW PF07496.15 ORF67027 - 2.8 8.0 6.5 13 5.9 0.3 2.2 2 0 0 2 2 2 0 CW-type Zinc Finger Conotoxin PF02950.17 ORF66781 - 0.15 13.1 0.2 0.19 12.7 0.2 1.2 1 0 0 1 1 1 0 Conotoxin EF-hand_1 PF00036.32 ORF66613 - 1e-09 37.2 1.8 0.0012 18.3 0.2 2.6 2 1 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF66613 - 4.1e-09 36.8 0.7 5.5e-09 36.4 0.5 1.3 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF66613 - 4.7e-09 35.4 0.2 0.00056 19.6 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF66613 - 1.8e-08 34.1 1.7 1.3e-05 24.9 0.3 2.5 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF66613 - 6.4e-07 28.6 4.1 0.012 15.1 0.2 2.5 2 1 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF66613 - 0.077 13.0 2.2 0.89 9.5 0.2 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand DUF1310 PF07006.11 ORF66613 - 0.084 12.9 0.3 0.12 12.4 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1310) Peptidase_S31 PF05578.12 ORF64949 - 0.015 14.8 0.0 0.018 14.6 0.0 1.1 1 0 0 1 1 1 0 Pestivirus NS3 polyprotein peptidase S31 MNE1 PF13762.6 ORF64831 - 0.023 14.7 0.1 0.036 14.1 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component Lustrin_cystein PF14625.6 ORF64831 - 6.4 7.2 14.1 4.2 7.8 11.1 2.0 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain Gamma-thionin PF00304.20 ORF64117 - 0.076 13.3 1.9 0.076 13.3 1.9 2.3 1 1 1 2 2 2 0 Gamma-thionin family DUF3718 PF12514.8 ORF63052 - 0.14 12.3 3.0 0.18 12.0 0.9 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF3718) ATF7IP_BD PF16788.5 ORF62437 - 0.71 9.9 5.1 0.75 9.9 5.1 1.1 1 0 0 1 1 1 0 ATF-interacting protein binding domain ERK-JNK_inhib PF15002.6 ORF62216 - 0.0079 15.9 0.1 0.011 15.4 0.1 1.3 1 1 0 1 1 1 1 ERK and JNK pathways, inhibitor Sipho_Gp157 PF05565.11 ORF62216 - 0.095 12.7 0.2 0.13 12.3 0.2 1.1 1 0 0 1 1 1 0 Siphovirus Gp157 ER-remodelling PF14755.6 ORF60915 - 0.035 14.4 0.9 0.044 14.1 0.9 1.1 1 0 0 1 1 1 0 Intracellular membrane remodeller DUF5133 PF17196.4 ORF60750 - 0.017 15.3 0.0 0.028 14.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF5133) Toxin_19 PF08088.12 ORF60670 - 1.1 9.4 12.5 0.34 11.0 8.0 2.4 2 1 0 2 2 2 0 Conotoxin I-superfamily Chromosome_seg PF13889.6 ORF59943 - 0.086 13.0 0.5 2 8.6 0.5 2.2 1 1 0 1 1 1 0 Chromosome segregation during meiosis Lysis_col PF02402.16 ORF59759 - 0.14 11.9 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Lysis protein PrgI PF12666.7 ORF59506 - 0.04 14.6 0.2 0.055 14.2 0.2 1.3 1 0 0 1 1 1 0 PrgI family protein YokU PF14122.6 ORF58858 - 0.092 12.7 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 YokU-like protein, putative antitoxin Leu_leader PF08054.11 ORF58359 - 0.36 10.5 0.3 0.36 10.5 0.3 1.7 2 0 0 2 2 2 0 Leucine operon leader peptide EF-hand_1 PF00036.32 ORF57659 - 0.011 15.2 1.1 0.032 13.8 0.1 2.3 3 0 0 3 3 3 0 EF hand EF-hand_7 PF13499.6 ORF57659 - 0.053 14.0 1.0 0.25 11.8 1.0 2.0 1 1 0 1 1 1 0 EF-hand domain pair RhoGAP PF00620.27 ORF57067 - 5.4e-06 26.3 0.1 6.6e-06 26.0 0.1 1.3 1 1 0 1 1 1 1 RhoGAP domain EF-hand_1 PF00036.32 ORF56368 - 1e-09 37.2 1.8 0.0012 18.3 0.2 2.6 2 1 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF56368 - 4.1e-09 36.8 0.7 5.5e-09 36.4 0.5 1.3 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF56368 - 4.7e-09 35.4 0.2 0.00056 19.6 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF56368 - 1.8e-08 34.1 1.7 1.3e-05 24.9 0.3 2.5 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF56368 - 6.4e-07 28.6 4.1 0.012 15.1 0.2 2.5 2 1 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF56368 - 0.077 13.0 2.2 0.89 9.5 0.2 2.0 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand DUF1310 PF07006.11 ORF56368 - 0.084 12.9 0.3 0.12 12.4 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1310) MORN PF02493.20 ORF55962 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF55962 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF55962 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation RE_CfrBI PF09516.10 ORF55263 - 0.055 12.9 0.3 0.071 12.5 0.3 1.2 1 0 0 1 1 1 0 CfrBI restriction endonuclease SelB-wing_1 PF09105.10 ORF54455 - 0.043 13.8 0.0 0.12 12.4 0.0 1.6 2 0 0 2 2 2 0 Elongation factor SelB, winged helix CAP_N PF01213.19 ORF53415 - 0.017 14.6 0.1 0.024 14.1 0.1 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Complex1_LYR PF05347.15 ORF53247 - 0.0013 18.7 0.7 0.0025 17.8 0.7 1.5 1 1 0 1 1 1 1 Complex 1 protein (LYR family) DUF3314 PF11771.8 ORF53104 - 0.066 13.3 0.1 0.077 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3314) ChW PF07538.11 ORF52335 - 0.18 11.8 0.0 0.34 10.9 0.0 1.4 1 0 0 1 1 1 0 Clostridial hydrophobic W NYAP_C PF15452.6 ORF52119 - 0.0029 17.5 0.3 0.0031 17.4 0.3 1.2 1 0 0 1 1 1 1 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter COPI_assoc PF08507.10 ORF51887 - 1.2e-05 25.4 1.3 1.6e-05 25.0 1.3 1.2 1 0 0 1 1 1 1 COPI associated protein YtpI PF14007.6 ORF51887 - 0.0059 16.7 0.3 0.0086 16.2 0.3 1.4 1 0 0 1 1 1 1 YtpI-like protein TMEM72 PF16054.5 ORF51887 - 0.013 15.2 0.4 0.015 15.0 0.4 1.2 1 0 0 1 1 1 0 Transmembrane protein family 72 Neurensin PF14927.6 ORF51887 - 0.047 13.4 0.4 0.052 13.2 0.4 1.3 1 0 0 1 1 1 0 Neurensin Phage_holin_3_6 PF07332.11 ORF51887 - 0.18 11.9 3.2 0.24 11.5 3.2 1.3 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF202 PF02656.15 ORF51887 - 0.2 12.1 2.1 0.3 11.6 1.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF202) FANCI_S4 PF14678.6 ORF51833 - 0.015 14.4 0.2 0.017 14.3 0.2 1.1 1 0 0 1 1 1 0 FANCI solenoid 4 HTH_22 PF13309.6 ORF51563 - 0.066 13.3 0.5 1.2 9.3 0.1 2.2 1 1 1 2 2 2 0 HTH domain SepA PF17080.5 ORF51391 - 0.061 13.7 4.8 0.072 13.5 4.8 1.1 1 0 0 1 1 1 0 Multidrug Resistance efflux pump GASA PF02704.14 ORF50689 - 0.034 14.3 8.8 0.17 12.0 0.4 2.2 2 0 0 2 2 2 0 Gibberellin regulated protein Siva PF05458.12 ORF50689 - 5.9 6.5 9.8 0.98 9.1 4.9 1.9 2 0 0 2 2 2 0 Cd27 binding protein (Siva) DAP10 PF07213.11 ORF49760 - 0.079 12.9 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 DAP10 membrane protein PHF5 PF03660.14 ORF49139 - 4.7e-44 148.9 15.1 5.2e-44 148.7 15.1 1.0 1 0 0 1 1 1 1 PHF5-like protein zn-ribbon_14 PF16503.5 ORF49139 - 0.0012 18.3 1.0 0.0012 18.3 1.0 3.6 4 0 0 4 4 4 1 Zinc-ribbon PolC_DP2 PF03833.13 ORF49139 - 0.67 7.7 8.3 0.67 7.7 8.3 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Ribosomal_L32p PF01783.23 ORF48518 - 0.013 15.7 0.5 0.044 14.0 0.1 2.0 2 0 0 2 2 2 0 Ribosomal L32p protein family DUF667 PF05018.13 ORF47918 - 4.6e-43 147.1 0.8 5.2e-43 146.9 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) UPF0242 PF06785.11 ORF47618 - 9 6.3 6.6 9.9 6.2 6.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus MORN PF02493.20 ORF46439 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF46439 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF46439 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation zf-CCCH PF00642.24 ORF45980 - 6.3e-05 22.8 8.2 0.0034 17.2 2.6 3.5 3 1 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF45980 - 0.014 15.4 1.5 0.014 15.4 1.5 2.4 3 0 0 3 3 3 0 Zinc finger domain SRCR PF00530.18 ORF45067 - 0.11 13.0 0.0 0.13 12.8 0.0 1.2 1 0 0 1 1 1 0 Scavenger receptor cysteine-rich domain IGFBP PF00219.18 ORF45061 - 0.2 12.4 8.5 8 7.2 8.5 2.2 1 1 0 1 1 1 0 Insulin-like growth factor binding protein ATP_bind_3 PF01171.20 ORF44486 - 0.063 13.0 0.0 0.081 12.7 0.0 1.1 1 0 0 1 1 1 0 PP-loop family YjcZ PF13990.6 ORF43302 - 0.11 11.8 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 YjcZ-like protein FAST_1 PF06743.15 ORF43264 - 0.081 12.9 0.1 0.2 11.6 0.1 1.8 1 1 0 1 1 1 0 FAST kinase-like protein, subdomain 1 Gyro_capsid PF04162.12 ORF42140 - 0.16 10.5 0.0 0.16 10.4 0.0 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) MBOAT_2 PF13813.6 ORF41847 - 0.083 13.2 2.3 0.098 12.9 1.8 1.4 1 1 0 1 1 1 0 Membrane bound O-acyl transferase family HATPase_c PF02518.26 ORF41653 - 7.2e-06 26.5 0.0 1.1e-05 25.9 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase zf_C2HC_14 PF18574.1 ORF41653 - 0.18 11.6 0.4 0.69 9.8 0.0 2.0 2 0 0 2 2 2 0 C2HC Zing finger domain PAR1 PF06521.11 ORF41497 - 0.0073 15.9 3.7 0.0087 15.7 3.7 1.1 1 0 0 1 1 1 1 PAR1 protein PTP_N PF12453.8 ORF41497 - 0.19 11.5 0.7 0.32 10.7 0.7 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase N terminal RNA_pol_N PF01194.17 ORF4147 - 0.036 14.3 3.0 0.058 13.7 0.2 2.2 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit Whib PF02467.16 ORF41391 - 3.7 8.2 7.7 12 6.6 1.3 2.2 1 1 1 2 2 2 0 Transcription factor WhiB TPR_1 PF00515.28 ORF41378 - 1.2e-15 56.6 1.7 2.4e-08 33.5 0.5 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF41378 - 2.8e-14 52.0 1.2 6.3e-08 32.1 0.9 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF41378 - 1.6e-10 40.3 0.6 1.1e-05 25.2 0.3 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF41378 - 2e-08 33.8 0.8 0.0009 18.9 0.0 2.4 1 1 1 2 2 2 2 TPR repeat TPR_16 PF13432.6 ORF41378 - 6e-08 33.2 0.2 6.8e-08 33.0 0.2 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF41378 - 1.5e-07 31.5 0.3 0.0001 22.4 0.0 1.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF41378 - 1.2e-06 28.5 0.7 0.00025 21.2 0.1 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF41378 - 3.9e-06 27.1 0.3 0.017 15.7 0.2 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF41378 - 1.9e-05 25.0 3.8 0.00038 20.9 0.5 1.9 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF41378 - 8.2e-05 22.8 0.2 0.1 12.9 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF41378 - 0.00043 20.9 0.2 0.3 12.0 0.0 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat NARP1 PF12569.8 ORF41378 - 0.0052 15.8 0.9 0.0061 15.5 0.9 1.1 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 ANAPC3 PF12895.7 ORF41378 - 0.0092 16.2 0.1 0.013 15.7 0.1 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 ORF41378 - 0.037 13.2 0.2 0.057 12.6 0.2 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF41378 - 0.038 13.9 0.6 5 7.1 0.1 2.8 1 1 2 3 3 3 0 Tetratricopeptide repeat DUF3808 PF10300.9 ORF41378 - 0.04 12.7 0.1 0.048 12.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3808) Phg_2220_C PF09524.10 ORF41331 - 0.16 12.1 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) ORC6 PF05460.13 ORF3989 - 0.11 11.8 3.8 0.11 11.7 3.8 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) FAM76 PF16046.5 ORF39218 - 0.068 12.5 14.1 0.08 12.3 14.1 1.0 1 0 0 1 1 1 0 FAM76 protein Presenilin PF01080.17 ORF39218 - 6.2 5.5 10.9 6.9 5.3 10.9 1.0 1 0 0 1 1 1 0 Presenilin Neur_chan_memb PF02932.16 ORF39218 - 8.7 6.3 8.2 9.1 6.3 8.2 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region TrfA PF07042.11 ORF38796 - 0.024 13.7 0.5 0.026 13.6 0.5 1.0 1 0 0 1 1 1 0 TrfA protein DUF5371 PF17341.2 ORF38796 - 0.093 12.9 0.6 0.15 12.3 0.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5371) IFNGR1 PF07140.11 ORF38776 - 0.041 14.0 0.0 0.062 13.4 0.0 1.3 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) Bmt2 PF11968.8 ORF38014 - 0.054 13.3 0.1 0.067 13.0 0.1 1.1 1 0 0 1 1 1 0 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 BRE1 PF08647.11 ORF37357 - 0.0013 18.8 9.9 0.0015 18.5 9.9 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Nup54 PF13874.6 ORF37357 - 0.0028 17.8 3.3 0.0036 17.4 3.2 1.3 1 1 0 1 1 1 1 Nucleoporin complex subunit 54 DUF5082 PF16888.5 ORF37357 - 0.003 17.8 7.8 0.0046 17.2 7.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) DUF3450 PF11932.8 ORF37357 - 0.0042 16.4 5.1 0.0047 16.3 5.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) FOXP-CC PF16159.5 ORF37357 - 0.0045 17.6 1.0 0.0076 16.9 1.0 1.4 1 0 0 1 1 1 1 FOXP coiled-coil domain UPF0449 PF15136.6 ORF37357 - 0.0098 16.4 3.5 0.012 16.0 3.5 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0449 HemX PF04375.14 ORF37357 - 0.014 14.7 4.5 0.016 14.5 4.5 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase CENP-F_leu_zip PF10473.9 ORF37357 - 0.016 15.2 8.2 0.018 15.1 8.2 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 tRNA-synt_1b PF00579.25 ORF37357 - 0.026 13.9 3.2 0.028 13.7 3.2 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) Phage_Mu_Gam PF07352.12 ORF37357 - 0.038 13.9 7.0 0.066 13.1 7.0 1.4 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein Spectrin PF00435.21 ORF37357 - 0.067 13.7 6.4 0.089 13.3 6.2 1.3 1 1 0 1 1 1 0 Spectrin repeat Laminin_II PF06009.12 ORF37357 - 0.081 12.9 6.2 0.11 12.6 6.1 1.2 1 1 0 1 1 1 0 Laminin Domain II DUF2120 PF09893.9 ORF37357 - 0.2 11.8 4.3 0.27 11.3 4.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) CENP-H PF05837.12 ORF37357 - 0.26 11.7 6.9 0.25 11.8 6.0 1.5 1 1 0 1 1 1 0 Centromere protein H (CENP-H) Atg14 PF10186.9 ORF37357 - 0.43 9.6 10.8 0.49 9.4 10.8 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 UPF0242 PF06785.11 ORF37357 - 0.44 10.6 8.6 0.47 10.5 8.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF1664 PF07889.12 ORF37357 - 0.48 10.5 5.1 0.54 10.3 5.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF37357 - 0.8 10.0 10.1 0.31 11.4 3.6 2.0 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) TMPIT PF07851.13 ORF37357 - 1.3 8.2 6.0 1.3 8.2 6.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein DivIC PF04977.15 ORF37357 - 4.2 7.2 11.1 0.83 9.5 4.8 2.2 1 1 1 2 2 2 0 Septum formation initiator DUF1921 PF09081.10 ORF35919 - 0.083 13.1 1.1 0.14 12.4 1.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1921) CSN4_RPN5_eIF3a PF18420.1 ORF35655 - 1 9.6 0.1 1 9.6 0.1 2.2 2 0 0 2 2 2 0 CSN4/RPN5/eIF3a helix turn helix domain Glutaredoxin PF00462.24 ORF35625 - 4.4e-13 49.3 0.0 5.8e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_3 PF13192.6 ORF35625 - 0.0025 17.8 0.0 0.0038 17.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain DUF836 PF05768.14 ORF35625 - 0.016 15.6 0.0 0.018 15.4 0.0 1.2 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) GIT_CC PF16559.5 ORF35208 - 0.00033 20.5 1.6 0.00049 19.9 1.6 1.3 1 0 0 1 1 1 1 GIT coiled-coil Rho guanine nucleotide exchange factor Gp-FAR-1 PF05823.12 ORF35208 - 0.004 17.5 1.0 0.005 17.2 1.0 1.1 1 0 0 1 1 1 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) FlaC_arch PF05377.11 ORF35208 - 0.0048 17.2 1.4 0.008 16.6 1.4 1.3 1 0 0 1 1 1 1 Flagella accessory protein C (FlaC) DivIC PF04977.15 ORF35208 - 0.035 13.9 4.4 0.048 13.4 4.4 1.2 1 0 0 1 1 1 0 Septum formation initiator CENP-H PF05837.12 ORF35208 - 0.036 14.5 0.3 0.039 14.3 0.3 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Vps51 PF08700.11 ORF35208 - 0.047 13.8 1.4 0.077 13.1 1.4 1.3 1 0 0 1 1 1 0 Vps51/Vps67 TMCO5 PF14992.6 ORF35208 - 0.2 11.2 4.7 0.2 11.2 4.5 1.3 1 1 0 1 1 1 0 TMCO5 family Lys_export PF03956.13 ORF35196 - 1.3e-38 132.4 4.5 1.4e-38 132.3 4.5 1.0 1 0 0 1 1 1 1 Lysine exporter LysO Phytochelatin PF05023.14 ORF35101 - 8.4e-16 57.8 0.0 1.1e-15 57.4 0.0 1.2 1 0 0 1 1 1 1 Phytochelatin synthase Nipped-B_C PF12830.7 ORF34166 - 0.21 11.5 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus PUF PF00806.19 ORF33820 - 9.5e-19 66.0 5.6 5.5e-07 28.9 0.1 3.1 3 0 0 3 3 3 3 Pumilio-family RNA binding repeat MIF4G PF02854.19 ORF33820 - 0.0052 16.5 1.4 0.014 15.1 1.4 1.6 1 1 0 1 1 1 1 MIF4G domain Regnase_1_C PF18561.1 ORF33820 - 0.15 11.9 0.6 0.55 10.0 0.2 2.1 1 1 1 2 2 2 0 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain DUF2070 PF09843.9 ORF32429 - 1.9 6.7 8.2 2 6.6 8.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) SOCS PF12610.8 ORF31663 - 0.07 13.5 3.6 0.27 11.6 0.5 2.3 2 0 0 2 2 2 0 Suppressor of cytokine signalling DUF563 PF04577.14 ORF31283 - 0.0022 18.2 0.0 0.0025 18.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF563) TAXi_N PF14543.6 ORF31283 - 0.0061 16.8 0.1 0.0072 16.6 0.1 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal RNA_pol_N PF01194.17 ORF31134 - 0.036 14.3 3.0 0.058 13.7 0.2 2.2 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit Pkinase PF00069.25 ORF30487 - 6e-10 38.9 0.0 6.7e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30487 - 0.015 14.6 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase Histone PF00125.24 ORF3023 - 6.5e-26 91.2 0.2 7.2e-26 91.1 0.2 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 ORF3023 - 0.00011 22.2 0.0 0.00014 21.9 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 ORF3023 - 0.00031 21.0 0.0 0.00038 20.7 0.0 1.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-S PF15630.6 ORF3023 - 0.0072 16.7 0.0 0.0084 16.5 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein TFIID-31kDa PF02291.15 ORF3023 - 0.014 15.4 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TLD PF07534.16 ORF29882 - 0.0099 16.1 0.0 0.022 15.0 0.0 1.5 2 0 0 2 2 2 1 TLD AAA_8 PF12780.7 ORF29882 - 0.11 11.8 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 MORN PF02493.20 ORF29590 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF29590 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF29590 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Na_K-ATPase PF00287.18 ORF29312 - 0.12 11.5 0.1 0.14 11.3 0.1 1.0 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Acetyltransf_10 PF13673.7 ORF28907 - 0.0097 15.8 0.0 0.012 15.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF535 PF04393.13 ORF27288 - 6.2e-39 133.9 1.4 6.8e-39 133.8 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF535) DUF640 PF04852.12 ORF27288 - 0.022 14.9 0.0 0.026 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF640) CDV3 PF15359.6 ORF27128 - 0.055 14.0 1.0 0.073 13.6 1.0 1.1 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 PAR1 PF06521.11 ORF2651 - 0.0073 15.9 3.7 0.0087 15.7 3.7 1.1 1 0 0 1 1 1 1 PAR1 protein PTP_N PF12453.8 ORF2651 - 0.19 11.5 0.7 0.32 10.7 0.7 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase N terminal zf-C2H2 PF00096.26 ORF24573 - 9.7e-05 22.6 0.6 0.00017 21.9 0.6 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF24573 - 0.016 16.0 0.3 0.033 15.0 0.3 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF24573 - 0.031 14.3 0.1 0.057 13.4 0.1 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger Ogr_Delta PF04606.12 ORF24573 - 0.053 13.5 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger zf-C2HC_2 PF13913.6 ORF24573 - 0.092 12.7 0.1 0.2 11.6 0.1 1.6 1 0 0 1 1 1 0 zinc-finger of a C2HC-type FAM35_C PF15793.5 ORF24573 - 0.096 12.1 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein family FAM35, C-terminal NYAP_C PF15452.6 ORF24410 - 0.093 12.6 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter PetL PF05115.14 ORF24320 - 0.98 9.5 8.4 2.3 8.2 8.4 1.7 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) Cyclin PF08613.11 ORF23280 - 4.6e-12 46.6 1.2 4.9e-12 46.5 1.2 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF23280 - 0.00019 21.1 0.5 0.00033 20.4 0.4 1.4 1 1 0 1 1 1 1 Cyclin, N-terminal domain Chordopox_E11 PF06138.12 ORF23280 - 0.031 14.6 0.1 0.044 14.1 0.1 1.4 1 1 0 1 1 1 0 Chordopoxvirus E11 protein MORN PF02493.20 ORF22568 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF22568 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF22568 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation PdaC PF13739.6 ORF22490 - 0.035 15.1 3.1 0.049 14.6 3.1 1.2 1 0 0 1 1 1 0 Deacetylase PdaC TPR_22 PF18833.1 ORF2227 - 0.033 14.3 2.2 0.084 13.0 2.2 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat MIP PF00230.20 ORF22113 - 6.6e-19 68.5 6.4 7.2e-19 68.4 6.4 1.0 1 0 0 1 1 1 1 Major intrinsic protein DnaJ PF00226.31 ORF21942 - 2.5e-15 56.3 0.4 3.8e-15 55.7 0.1 1.5 2 0 0 2 2 2 1 DnaJ domain Ish1 PF10281.9 ORF21942 - 0.00054 20.2 0.0 0.00096 19.4 0.0 1.4 1 0 0 1 1 1 1 Putative stress-responsive nuclear envelope protein HATPase_c PF02518.26 ORF21912 - 4.9e-13 49.6 0.0 5.4e-13 49.4 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 ORF21912 - 0.001 18.9 0.0 0.0013 18.6 0.0 1.1 1 0 0 1 1 1 1 GHKL domain TraD_N PF12615.8 ORF21415 - 0.066 14.0 0.2 0.077 13.8 0.2 1.1 1 0 0 1 1 1 0 F sex factor protein N terminal Pro_isomerase PF00160.21 ORF21352 - 4.2e-25 88.9 0.0 4.6e-25 88.7 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pirin PF02678.16 ORF2120 - 0.067 13.2 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Pirin Ocular_alb PF02101.15 ORF19474 - 0.39 9.6 3.4 0.6 9.0 0.4 1.9 1 1 1 2 2 2 0 Ocular albinism type 1 protein BMF PF15185.6 ORF18877 - 0.18 11.5 0.0 0.21 11.3 0.0 1.0 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis HOK_GEF PF01848.16 ORF152930 - 0.021 14.3 0.5 0.038 13.4 0.5 1.4 1 0 0 1 1 1 0 Hok/gef family Thyroglobulin_1 PF00086.18 ORF152930 - 1 9.1 4.8 0.72 9.6 0.2 2.3 2 1 0 2 2 2 0 Thyroglobulin type-1 repeat MORN PF02493.20 ORF151298 - 0.42 10.6 2.6 0.59 10.1 0.2 2.4 3 0 0 3 3 3 0 MORN repeat TRAM PF01938.20 ORF151127 - 0.004 17.1 0.1 0.005 16.8 0.1 1.2 1 0 0 1 1 1 1 TRAM domain HisK_N PF09385.10 ORF150867 - 0.068 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase N terminal Cytomega_TRL10 PF06084.11 ORF149557 - 0.31 11.0 5.0 0.37 10.8 5.0 1.1 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks264.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks264.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks264.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks264.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Sporozoite_P67 PF05642.11 ORF149291 - 2.4 6.1 4.4 2.9 5.9 4.4 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Mer2 PF09074.10 ORF147066 - 0.0076 16.1 2.0 0.0078 16.1 2.0 1.1 1 0 0 1 1 1 1 Mer2 DUF269 PF03270.13 ORF147066 - 0.034 14.3 0.1 0.035 14.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF269 RD3 PF14473.6 ORF146826 - 0.056 13.3 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 RD3 protein DUF3496 PF12001.8 ORF14559 - 0.028 14.8 5.7 0.035 14.5 5.7 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3496) DHR10 PF18595.1 ORF14559 - 0.076 13.1 5.8 0.091 12.8 5.8 1.2 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain DUF3631 PF12307.8 ORF145001 - 0.067 13.4 0.0 0.08 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3631) SlyX PF04102.12 ORF144509 - 0.0022 18.6 1.2 0.0049 17.4 0.4 2.1 1 1 1 2 2 2 1 SlyX Rabaptin PF03528.15 ORF144509 - 0.0037 16.0 4.1 0.0042 15.9 4.1 1.1 1 0 0 1 1 1 1 Rabaptin CEP209_CC5 PF16574.5 ORF144509 - 0.0073 16.5 7.3 0.0096 16.1 7.3 1.3 1 0 0 1 1 1 1 Coiled-coil region of centrosome protein CE290 Fib_alpha PF08702.10 ORF144509 - 0.0075 16.5 8.0 0.032 14.4 8.0 1.9 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family FPP PF05911.11 ORF144509 - 0.011 14.0 8.0 0.012 13.9 8.0 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil ATG16 PF08614.11 ORF144509 - 0.019 15.2 5.4 0.057 13.6 5.6 1.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Spc7 PF08317.11 ORF144509 - 0.034 13.0 8.3 0.038 12.9 8.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF724 PF05266.14 ORF144509 - 0.045 13.6 7.9 0.053 13.4 7.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) UPF0242 PF06785.11 ORF144509 - 0.046 13.8 8.2 0.052 13.6 8.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 ORF144509 - 0.056 14.0 7.3 0.076 13.6 7.3 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF4094 PF13334.6 ORF144509 - 0.061 13.7 1.8 0.077 13.4 1.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) DUF4407 PF14362.6 ORF144509 - 0.069 12.5 1.7 0.077 12.3 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) BRE1 PF08647.11 ORF144509 - 0.073 13.2 10.7 0.1 12.7 10.7 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase TBCA PF02970.16 ORF144509 - 0.075 13.4 9.4 0.73 10.2 9.4 2.1 1 1 0 1 1 1 0 Tubulin binding cofactor A Cep57_CLD_2 PF14197.6 ORF144509 - 0.089 12.9 0.6 0.089 12.9 0.6 2.1 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 HIP1_clath_bdg PF16515.5 ORF144509 - 0.11 13.1 5.0 0.15 12.7 5.0 1.3 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ADIP PF11559.8 ORF144509 - 0.12 12.5 8.0 0.15 12.1 8.0 1.3 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding Exonuc_VII_L PF02601.15 ORF144509 - 0.12 12.0 4.2 0.13 11.8 4.2 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit EHN PF06441.12 ORF144509 - 0.14 12.6 1.9 0.52 10.7 1.9 1.9 1 1 0 1 1 1 0 Epoxide hydrolase N terminus Phage_GP20 PF06810.11 ORF144509 - 0.14 11.9 9.2 0.17 11.7 9.2 1.1 1 0 0 1 1 1 0 Phage minor structural protein GP20 HemX PF04375.14 ORF144509 - 0.16 11.2 4.2 0.17 11.1 4.2 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3837 PF12939.7 ORF144509 - 0.21 12.0 9.1 0.068 13.6 2.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3837) DUF16 PF01519.16 ORF144509 - 0.27 11.8 7.8 0.48 10.9 7.9 1.4 1 1 0 1 1 1 0 Protein of unknown function DUF16 OrfB_IS605 PF01385.19 ORF144509 - 0.35 11.1 5.6 0.066 13.4 1.5 1.8 1 1 1 2 2 2 0 Probable transposase Med21 PF11221.8 ORF144509 - 0.36 11.1 9.8 0.87 9.8 0.7 2.1 1 1 1 2 2 2 0 Subunit 21 of Mediator complex XhlA PF10779.9 ORF144509 - 0.67 10.2 5.8 1.1 9.5 1.8 2.4 1 1 1 2 2 2 0 Haemolysin XhlA Rho_Binding PF08912.11 ORF144509 - 1.2 10.0 15.0 1.7 9.5 3.2 2.1 1 1 1 2 2 2 0 Rho Binding DivIC PF04977.15 ORF144509 - 2.3 8.0 11.4 0.38 10.6 2.3 2.2 1 1 1 2 2 2 0 Septum formation initiator TMF_DNA_bd PF12329.8 ORF144509 - 5.7 7.0 14.3 24 5.0 14.3 2.0 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding MSSP PF03940.13 ORF143926 - 0.016 14.8 5.6 0.023 14.3 5.6 1.2 1 0 0 1 1 1 0 Male specific sperm protein PH_11 PF15413.6 ORF143879 - 0.067 13.6 0.2 0.083 13.3 0.2 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain V_ATPase_I PF01496.19 ORF142766 - 8.9e-09 33.8 0.1 9.4e-09 33.8 0.1 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF4342 PF14242.6 ORF142766 - 0.03 14.3 0.1 0.079 13.0 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4342) TraL PF07178.11 ORF142448 - 0.049 14.1 1.0 0.065 13.7 1.0 1.1 1 0 0 1 1 1 0 TraL protein EF-hand_1 PF00036.32 ORF141220 - 3.4e-09 35.6 3.8 0.0014 18.0 0.0 2.9 2 1 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF141220 - 6.8e-09 36.1 0.4 9.6e-09 35.6 0.4 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF141220 - 6.8e-08 31.8 0.4 0.0034 17.2 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF141220 - 6.6e-05 22.7 0.4 0.018 14.9 0.2 2.7 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF141220 - 0.00013 21.3 1.8 0.063 12.8 0.5 2.4 2 0 0 2 2 2 2 EF hand EF-hand_9 PF14658.6 ORF141220 - 0.013 15.8 0.1 0.018 15.4 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain EF-hand_4 PF12763.7 ORF141220 - 0.036 14.0 3.2 3.5 7.6 0.1 2.0 1 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand ICAM_N PF03921.14 ORF140481 - 0.15 11.8 5.4 0.32 10.7 0.0 2.2 1 1 0 2 2 2 0 Intercellular adhesion molecule (ICAM), N-terminal domain ETF_alpha PF00766.19 ORF140402 - 6.4e-20 71.0 0.1 9e-20 70.5 0.1 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain IRK_C PF17655.1 ORF140384 - 0.085 12.5 0.2 0.11 12.1 0.2 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain FliS PF02561.14 ORF140090 - 0.022 15.0 0.7 0.032 14.5 0.6 1.4 1 1 0 1 1 1 0 Flagellar protein FliS BST2 PF16716.5 ORF140090 - 0.15 12.6 3.5 0.28 11.8 3.5 1.5 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 DUF4094 PF13334.6 ORF140090 - 0.16 12.4 2.1 1 9.9 2.1 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) Mitochondr_Som1 PF11093.8 ORF139641 - 1.3 9.1 9.0 1.2 9.1 4.1 2.3 1 1 1 2 2 2 0 Mitochondrial export protein Som1 IRK_C PF17655.1 ORF138944 - 0.085 12.5 0.2 0.11 12.1 0.2 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain IRK_C PF17655.1 ORF137419 - 0.085 12.5 0.2 0.11 12.1 0.2 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain DUF1656 PF07869.12 ORF136931 - 0.037 14.0 0.4 0.069 13.2 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1656) 2-Hacid_dh_C PF02826.19 ORF136388 - 3.1e-22 78.8 0.0 3.7e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RNA_pol_N PF01194.17 ORF134883 - 0.036 14.3 3.0 0.058 13.7 0.2 2.2 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit zf-RING_4 PF14570.6 ORF134609 - 0.043 13.6 1.1 0.083 12.7 1.1 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_2 PF13639.6 ORF134609 - 0.3 11.4 6.3 0.55 10.6 6.3 1.5 1 0 0 1 1 1 0 Ring finger domain MPC PF03650.13 ORF134549 - 9.9e-36 122.2 0.6 1.1e-35 122.1 0.6 1.0 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers PapC_C PF13953.6 ORF134124 - 0.0072 16.1 0.0 0.01 15.6 0.0 1.2 1 0 0 1 1 1 1 PapC C-terminal domain DUF1700 PF08006.11 ORF133642 - 0.17 11.4 2.8 0.22 11.0 2.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Conotoxin PF02950.17 ORF132692 - 0.15 13.1 0.2 0.19 12.7 0.2 1.2 1 0 0 1 1 1 0 Conotoxin Pneumo_matrix PF03393.16 ORF131800 - 0.049 12.9 0.0 0.049 12.9 0.0 1.2 1 0 0 1 1 1 0 Pneumovirus matrix protein Gag_p24 PF00607.20 ORF131800 - 0.097 12.5 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 gag gene protein p24 (core nucleocapsid protein) TPR_6 PF13174.6 ORF130322 - 1.1e-20 72.8 0.3 1.2e-07 31.9 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF130322 - 6.7e-13 49.0 0.1 6.9e-06 26.6 0.0 2.8 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF130322 - 2.8e-10 39.5 0.0 0.00081 19.3 0.2 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat YfiO PF13525.6 ORF130322 - 2e-07 30.9 3.3 5.1e-05 23.1 0.5 2.2 1 1 1 2 2 2 2 Outer membrane lipoprotein TPR_17 PF13431.6 ORF130322 - 1.7e-06 28.0 1.1 0.041 14.3 1.4 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_18 PF13512.6 ORF130322 - 6.2e-06 26.4 4.5 0.14 12.3 0.0 2.9 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF130322 - 6.8e-06 25.9 0.3 0.03 14.5 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF130322 - 4.1e-05 24.1 0.0 0.49 11.4 0.0 2.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_21 PF09976.9 ORF130322 - 0.00018 21.3 0.9 0.037 13.7 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat-like domain TPR_1 PF00515.28 ORF130322 - 0.00064 19.4 0.7 0.42 10.5 0.7 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat DUF4810 PF16068.5 ORF130322 - 0.00078 19.9 0.1 0.69 10.5 0.0 2.5 1 1 2 3 3 3 2 Domain of unknown function (DUF4810) TPR_12 PF13424.6 ORF130322 - 0.0009 19.5 0.0 0.0025 18.0 0.0 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF130322 - 0.002 18.6 0.2 2.3 8.8 0.2 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF130322 - 0.0061 16.8 0.4 0.012 15.8 0.3 1.5 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 ORF130322 - 1.1 9.0 9.0 2.3 7.9 1.3 3.2 3 1 1 4 4 4 0 TPR repeat DUF4201 PF13870.6 ORF129425 - 0.0051 16.6 1.9 0.0066 16.2 1.8 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) Ribosomal_S14 PF00253.21 ORF128420 - 7.5e-27 92.9 1.6 1e-26 92.4 1.6 1.2 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e YfzA PF14118.6 ORF126915 - 0.02 15.3 2.1 0.025 15.0 2.1 1.3 1 0 0 1 1 1 0 YfzA-like protein Ctf8 PF09696.10 ORF126125 - 0.035 14.4 0.3 0.23 11.8 0.3 2.3 1 1 0 1 1 1 0 Ctf8 Staphostatin_A PF09022.10 ORF126125 - 0.1 12.5 0.1 0.14 12.1 0.1 1.3 1 1 0 1 1 1 0 Staphostatin A NOP5NT PF08156.13 ORF125687 - 0.016 15.6 0.0 0.016 15.6 0.0 2.2 3 1 0 3 3 3 0 NOP5NT (NUC127) domain RD3 PF14473.6 ORF124526 - 0.056 13.3 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 RD3 protein Tmpp129 PF10272.9 ORF123930 - 0.76 9.0 8.3 0.91 8.8 8.3 1.1 1 0 0 1 1 1 0 Putative transmembrane protein precursor DUF883 PF05957.13 ORF123827 - 1.4e-29 102.5 1.5 1.6e-29 102.4 1.5 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) YtxH PF12732.7 ORF123827 - 0.0017 18.9 10.9 0.078 13.5 1.1 2.7 2 1 1 3 3 3 2 YtxH-like protein ApoLp-III PF07464.11 ORF123827 - 0.015 15.4 0.5 0.037 14.1 0.5 1.6 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Spore_III_AB PF09548.10 ORF123827 - 0.015 15.4 1.1 0.044 13.9 0.4 1.8 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) Apolipoprotein PF01442.18 ORF123827 - 0.024 14.5 5.2 0.028 14.3 5.2 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Remorin_C PF03763.13 ORF123827 - 0.032 14.1 4.5 0.039 13.8 4.5 1.2 1 0 0 1 1 1 0 Remorin, C-terminal region Ribosomal_L36e PF01158.18 ORF123827 - 0.033 14.4 1.0 0.04 14.1 1.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L36e DUF4404 PF14357.6 ORF123827 - 0.054 14.1 2.7 0.083 13.5 2.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) DotU PF09850.9 ORF123827 - 0.11 12.2 0.1 0.27 10.9 0.1 1.3 1 1 0 1 1 1 0 Type VI secretion system protein DotU K-box PF01486.17 ORF123827 - 0.12 12.5 3.7 2.5 8.3 3.7 2.1 1 1 0 1 1 1 0 K-box region PLAC9 PF15205.6 ORF123827 - 0.13 12.7 0.2 0.22 11.9 0.2 1.3 1 0 0 1 1 1 0 Placenta-specific protein 9 DUF543 PF04418.12 ORF123827 - 0.18 11.8 1.8 0.42 10.6 1.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF543) DUF1451 PF07295.11 ORF123827 - 0.31 11.1 2.4 0.34 10.9 2.4 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Ribosomal_L35p PF01632.19 ORF123729 - 0.052 14.1 1.3 0.075 13.6 0.1 1.8 2 0 0 2 2 2 0 Ribosomal protein L35 DUF848 PF05852.11 ORF1236 - 0.0054 16.9 0.2 0.0084 16.2 0.2 1.3 1 0 0 1 1 1 1 Gammaherpesvirus protein of unknown function (DUF848) bZIP_1 PF00170.21 ORF1236 - 0.014 15.4 1.7 0.12 12.5 0.2 2.2 2 0 0 2 2 2 0 bZIP transcription factor Cnn_1N PF07989.11 ORF1236 - 0.056 13.6 4.7 0.35 11.1 4.4 2.1 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF2312 PF10073.9 ORF1236 - 0.16 11.6 2.5 0.39 10.4 1.4 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) TSC22 PF01166.18 ORF1236 - 3.1 8.2 5.8 11 6.4 1.6 2.7 2 1 1 3 3 3 0 TSC-22/dip/bun family AAA_lid_5 PF17865.1 ORF123216 - 0.076 13.1 0.1 0.093 12.8 0.1 1.1 1 0 0 1 1 1 0 Midasin AAA lid domain CENP-T_N PF16171.5 ORF123072 - 0.015 14.3 2.0 0.016 14.1 2.0 1.0 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T N-terminus TP53IP5 PF15331.6 ORF123072 - 2 8.5 6.8 2.2 8.4 6.8 1.0 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 RCC1_2 PF13540.6 ORF122946 - 1.3e-05 24.9 1.3 0.077 12.8 0.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 ORF122946 - 2.2 8.4 8.6 7.2 6.7 1.1 2.9 3 0 0 3 3 3 0 PheRS DNA binding domain 2 Pkinase PF00069.25 ORF122684 - 0.0007 19.0 0.2 0.0012 18.3 0.1 1.4 2 0 0 2 2 2 1 Protein kinase domain Ribosomal_L44 PF00935.19 ORF121549 - 4.1e-27 94.5 12.6 4.1e-27 94.5 12.6 1.7 1 1 1 2 2 2 1 Ribosomal protein L44 YyzF PF14116.6 ORF121549 - 0.084 12.9 0.3 0.18 11.9 0.3 1.5 1 0 0 1 1 1 0 YyzF-like protein DUF5453 PF17534.2 ORF121010 - 0.011 15.6 0.3 0.012 15.5 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5453) Imm59 PF15597.6 ORF121009 - 0.014 15.8 0.2 0.02 15.4 0.2 1.3 1 0 0 1 1 1 0 Immunity protein 59 ETF_QO PF05187.13 ORF119681 - 0.0015 18.7 0.0 0.0019 18.3 0.0 1.3 1 1 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_10 PF13237.6 ORF119681 - 0.0073 16.4 0.7 0.013 15.6 0.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF119681 - 0.012 15.8 0.4 0.021 15.0 0.4 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF119681 - 0.64 10.2 5.5 0.51 10.5 1.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain DUF496 PF04363.12 ORF117637 - 0.15 12.1 4.1 0.22 11.6 4.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF496) Pns11_12 PF17464.2 ORF116835 - 0.17 11.6 0.1 0.2 11.3 0.1 1.1 1 0 0 1 1 1 0 Non-structural protein 11 and 12 SPRR2 PF14820.6 ORF116568 - 0.55 10.4 11.9 0.54 10.4 1.1 2.5 2 1 0 2 2 2 0 Small proline-rich 2 RNA_pol_N PF01194.17 ORF115774 - 0.036 14.3 3.0 0.058 13.7 0.2 2.2 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit Cys_rich_CWC PF14375.6 ORF115363 - 0.023 15.1 0.2 0.037 14.4 0.2 1.4 1 0 0 1 1 1 0 Cysteine-rich CWC MEF2_binding PF09047.10 ORF115363 - 0.076 12.9 0.2 4 7.4 0.1 2.4 2 0 0 2 2 2 0 MEF2 binding DUF4726 PF15855.5 ORF114789 - 0.0038 17.4 0.3 0.0054 16.9 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4726) MMR_HSR1 PF01926.23 ORF114637 - 2.1e-06 27.8 0.0 2.5e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 ORF114637 - 2e-05 24.2 0.3 2.6e-05 23.9 0.3 1.1 1 0 0 1 1 1 1 Ras family FeoB_N PF02421.18 ORF114637 - 2.6e-05 23.8 0.1 4.6e-05 23.0 0.1 1.4 1 1 0 1 1 1 1 Ferrous iron transport protein B Roc PF08477.13 ORF114637 - 9.3e-05 22.6 0.0 0.00012 22.3 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA PF00004.29 ORF114637 - 0.0038 17.7 0.0 0.0046 17.4 0.0 1.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 ORF114637 - 0.0051 17.2 0.0 0.0087 16.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA-ATPase_like PF09820.9 ORF114637 - 0.02 14.3 0.2 0.028 13.9 0.1 1.3 1 1 0 1 1 1 0 Predicted AAA-ATPase TniB PF05621.11 ORF114637 - 0.024 14.1 0.0 0.024 14.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein RuvB_N PF05496.12 ORF114637 - 0.042 13.6 0.0 0.042 13.6 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 ORF114637 - 0.045 14.3 0.0 0.047 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain Gtr1_RagA PF04670.12 ORF114637 - 0.077 12.3 0.0 0.087 12.2 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF883 PF05957.13 ORF114523 - 1.2e-28 99.5 0.3 1.3e-28 99.4 0.3 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) YtxH PF12732.7 ORF114523 - 0.012 16.1 10.2 0.072 13.6 1.5 2.4 2 1 0 2 2 2 0 YtxH-like protein DUF4449 PF14613.6 ORF114523 - 0.016 15.3 0.3 0.019 15.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) Apolipoprotein PF01442.18 ORF114523 - 0.028 14.3 0.2 0.033 14.1 0.2 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain ATP-synt_DE PF00401.20 ORF114523 - 0.051 13.9 3.4 0.075 13.3 2.5 1.6 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DUF512 PF04459.12 ORF114523 - 0.077 12.3 0.0 0.084 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF512) SbcD_C PF12320.8 ORF114523 - 0.081 13.2 0.2 0.1 12.9 0.2 1.1 1 0 0 1 1 1 0 Type 5 capsule protein repressor C-terminal domain Gal_mutarotas_3 PF18080.1 ORF114523 - 0.11 12.4 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Galactose mutarotase-like fold domain Sugar_tr PF00083.24 ORF114466 - 5.6e-08 32.1 0.0 5.6e-08 32.1 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2207 PF09972.9 ORF114466 - 0.078 11.7 0.1 0.08 11.7 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF979 PF06166.12 ORF114466 - 0.078 12.1 0.0 0.087 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF979) S_4TM PF18159.1 ORF114466 - 0.081 12.2 0.0 0.087 12.1 0.0 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain SelB-wing_1 PF09105.10 ORF112365 - 0.043 13.8 0.0 0.12 12.4 0.0 1.6 2 0 0 2 2 2 0 Elongation factor SelB, winged helix MbeD_MobD PF04899.12 ORF111733 - 0.11 12.6 1.4 2.4 8.4 0.0 2.4 2 1 0 3 3 3 0 MbeD/MobD like Nup54 PF13874.6 ORF111733 - 0.22 11.6 0.2 1.2 9.2 0.2 1.8 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 Gliadin PF13016.6 ORF111074 - 0.017 15.5 3.2 0.028 14.8 3.2 1.4 1 0 0 1 1 1 0 Cys-rich Gliadin N-terminal GNAT_C PF18164.1 ORF110987 - 0.15 11.8 0.5 0.18 11.5 0.5 1.1 1 0 0 1 1 1 0 GNAT-like C-terminal domain LRRNT PF01462.18 ORF110987 - 0.44 10.3 3.2 0.75 9.5 3.2 1.3 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain DUF4462 PF14692.6 ORF110412 - 0.14 11.7 0.7 0.4 10.2 0.7 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) YjcZ PF13990.6 ORF11036 - 0.11 11.8 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 YjcZ-like protein CobW_C PF07683.14 ORF109992 - 1e-13 51.0 0.1 1.2e-13 50.8 0.1 1.0 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain MORN PF02493.20 ORF109342 - 5.5e-05 22.8 7.0 0.00068 19.4 0.7 3.3 3 0 0 3 3 3 1 MORN repeat Caps_assemb_Wzi PF14052.6 ORF109342 - 0.04 13.0 0.4 0.04 13.0 0.4 1.1 1 0 0 1 1 1 0 Capsule assembly protein Wzi Surfac_D-trimer PF09006.11 ORF109342 - 0.047 13.6 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation RtcB PF01139.17 ORF109248 - 0.00057 19.2 0.0 0.00066 19.0 0.0 1.1 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Herpes_pp85 PF04637.12 ORF108988 - 6.2 5.1 4.9 6.9 5.0 4.9 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Turandot PF07240.11 ORF10766 - 0.011 15.7 0.3 0.24 11.4 0.0 2.3 2 1 0 2 2 2 0 Stress-inducible humoral factor Turandot IDO PF01231.18 ORF10766 - 0.02 13.7 0.3 0.024 13.4 0.3 1.0 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase Lysis_col PF02402.16 ORF107564 - 0.14 11.9 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Lysis protein DUF2877 PF11392.8 ORF107550 - 4.9e-17 62.6 0.0 5.5e-17 62.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2877) IRK_C PF17655.1 ORF106864 - 0.085 12.5 0.2 0.11 12.1 0.2 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain BolA PF01722.18 ORF10615 - 3.1e-15 56.2 0.2 9e-14 51.5 0.2 2.1 1 1 0 1 1 1 1 BolA-like protein TcdA_TcdB_pore PF12920.7 ORF10615 - 0.032 12.5 0.0 0.039 12.2 0.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF3425 PF11905.8 ORF10615 - 0.086 12.8 0.0 0.097 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) START PF01852.19 ORF106024 - 5e-05 22.8 0.0 6.8e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 START domain DUF2151 PF10221.9 ORF106000 - 0.1 11.2 0.0 0.12 11.0 0.0 1.1 1 0 0 1 1 1 0 Cell cycle and development regulator V_ATPase_I PF01496.19 ORF105775 - 5.4e-09 34.6 0.5 5.7e-09 34.5 0.5 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family AAA_26 PF13500.6 ORF105232 - 0.00013 21.8 0.0 0.00015 21.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_31 PF13614.6 ORF105232 - 0.0012 18.8 0.0 0.0018 18.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain Synaptonemal_3 PF15191.6 ORF105232 - 0.092 12.5 0.0 12 5.7 0.0 2.1 2 0 0 2 2 2 0 Synaptonemal complex central element protein 3 ArsA_ATPase PF02374.15 ORF105232 - 0.2 10.8 0.0 12 5.0 0.0 2.0 2 0 0 2 2 2 0 Anion-transporting ATPase DUF3903 PF13043.6 ORF105091 - 0.078 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) IRK_C PF17655.1 ORF104805 - 0.085 12.5 0.2 0.11 12.1 0.2 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain Chaperone_III PF07824.12 ORF104536 - 0.033 14.4 0.3 0.11 12.7 0.1 1.8 1 1 1 2 2 2 0 Type III secretion chaperone domain W2 PF02020.18 ORF103896 - 0.13 12.4 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 eIF4-gamma/eIF5/eIF2-epsilon Helicase_C PF00271.31 ORF103023 - 0.028 14.8 0.1 0.036 14.4 0.1 1.1 1 0 0 1 1 1 0 Helicase conserved C-terminal domain DUF515 PF04415.12 ORF102030 - 7.2 4.9 6.3 8.3 4.7 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) YcgR PF07317.12 ORF101482 - 0.03 14.2 0.5 0.048 13.5 0.5 1.3 1 1 0 1 1 1 0 Flagellar regulator YcgR B3 PF02362.21 ORF10115 - 0.1 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 B3 DNA binding domain MNE1 PF13762.6 ORF100607 - 0.023 14.7 0.1 0.036 14.1 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component Lustrin_cystein PF14625.6 ORF100607 - 6.4 7.2 14.1 4.2 7.8 11.1 2.0 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain Lantibiotic_a PF14867.6 ORF100078 - 0.0058 16.3 0.1 0.012 15.3 0.1 1.6 1 0 0 1 1 1 1 Lantibiotic alpha DUF1087 PF06465.13 ORF10002 - 0.24 11.4 0.3 0.36 10.9 0.3 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) DUF5313 PF17240.2 NODE_56972_length_298_cov_0.870722_g49034_i0forward_frame_1 - 0.096 13.1 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5313) AAA_34 PF13872.6 NODE_56968_length_298_cov_1.330798_g49030_i0reverse_frame_1 - 0.04 12.8 0.2 0.046 12.6 0.2 1.0 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 SWIM PF04434.17 NODE_56967_length_298_cov_1.342205_g49029_i0reverse_frame_1 - 0.00047 19.8 0.7 0.00047 19.8 0.7 2.3 2 1 1 3 3 3 1 SWIM zinc finger MNHE PF01899.16 NODE_56967_length_298_cov_1.342205_g49029_i0reverse_frame_1 - 0.13 12.0 0.3 0.16 11.8 0.3 1.1 1 0 0 1 1 1 0 Na+/H+ ion antiporter subunit nec1 PF10379.9 NODE_56964_length_298_cov_1.444867_g49026_i0forward_frame_1 - 0.14 11.7 1.0 0.15 11.5 1.0 1.1 1 0 0 1 1 1 0 Virulence protein nec1 Nod1 PF17114.5 NODE_56950_length_298_cov_1.726236_g49012_i0forward_frame_1 - 0.0079 16.4 0.5 0.0085 16.3 0.5 1.1 1 0 0 1 1 1 1 Gef2-related medial cortical node protein Nod1 zf-H3C2 PF16721.5 NODE_56950_length_298_cov_1.726236_g49012_i0forward_frame_1 - 0.02 15.2 0.9 0.031 14.6 0.9 1.5 1 1 0 1 1 1 0 Zinc-finger like, probable DNA-binding PhoLip_ATPase_N PF16209.5 NODE_56949_length_298_cov_1.730038_g49011_i0reverse_frame_1 - 0.1 12.3 2.5 0.17 11.6 2.5 1.3 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal p25-alpha PF05517.12 NODE_56936_length_298_cov_2.076046_g48998_i0forward_frame_1 - 0.005 17.0 0.1 0.014 15.6 0.0 1.7 2 0 0 2 2 2 1 p25-alpha EF-hand_6 PF13405.6 NODE_56936_length_298_cov_2.076046_g48998_i0forward_frame_1 - 0.037 14.0 0.4 0.31 11.1 0.0 2.3 2 0 0 2 2 2 0 EF-hand domain Phage_C PF12025.8 NODE_56935_length_298_cov_2.079848_g48997_i0forward_frame_1 - 0.059 13.2 0.1 0.12 12.3 0.1 1.5 1 1 0 1 1 1 0 Phage protein C CEBP_ZZ PF16366.5 NODE_56928_length_298_cov_2.250951_g48990_i0forward_frame_1 - 0.076 13.3 8.3 0.96 9.7 1.3 2.2 2 0 0 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Erv26 PF04148.13 NODE_56921_length_298_cov_2.406844_g48983_i0forward_frame_1 - 2.1 8.1 7.5 2.9 7.7 0.9 2.0 1 1 1 2 2 2 0 Transmembrane adaptor Erv26 Transp_cyt_pur PF02133.15 NODE_56920_length_298_cov_2.528517_g48982_i0reverse_frame_1 - 7.8e-32 110.6 15.9 8.4e-32 110.5 15.9 1.0 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin Myb_DNA-bind_4 PF13837.6 NODE_56920_length_298_cov_2.528517_g48982_i0forward_frame_1 - 0.059 13.8 0.5 0.075 13.4 0.5 1.2 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain MutS_V PF00488.21 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 3.4e-06 27.2 0.1 5.4e-06 26.6 0.1 1.3 1 0 0 1 1 1 1 MutS domain V AAA_23 PF13476.6 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 0.019 15.5 0.2 0.03 14.8 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 0.025 14.3 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_27 PF13514.6 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 0.031 13.9 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain MutS_III PF05192.18 NODE_56918_length_298_cov_2.688213_g48980_i0reverse_frame_1 - 0.15 12.3 0.2 0.24 11.6 0.2 1.3 1 0 0 1 1 1 0 MutS domain III TetR_C_33 PF13305.6 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_1 - 0.06 14.1 0.0 0.076 13.8 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain NPCC PF08058.11 NODE_56910_length_298_cov_3.391635_g48972_i0reverse_frame_1 - 5.5 7.1 5.4 9 6.4 5.2 1.8 1 1 0 1 1 1 0 Nuclear pore complex component Metallothio_Euk PF12749.7 NODE_56909_length_298_cov_3.817490_g48971_i0reverse_frame_1 - 0.92 9.7 11.3 0.82 9.9 4.5 2.1 1 1 1 2 2 2 0 Eukaryotic metallothionein DUF1996 PF09362.10 NODE_56908_length_298_cov_4.391635_g48970_i0reverse_frame_1 - 0.13 12.2 0.1 0.14 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1996) PPR_2 PF13041.6 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 5e-07 29.8 0.0 3.1e-06 27.3 0.0 1.9 2 0 0 2 2 2 1 PPR repeat family PPR PF01535.20 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 7.2e-06 25.9 0.0 0.00026 21.0 0.0 2.2 2 0 0 2 2 2 1 PPR repeat PPR_3 PF13812.6 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 8.6e-05 22.5 0.0 0.0019 18.2 0.0 2.1 1 1 1 2 2 2 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.00016 21.3 0.0 0.001 18.7 0.0 2.1 2 0 0 2 2 2 1 PPR repeat PPR_long PF17177.4 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.0031 16.9 0.0 0.0039 16.6 0.0 1.2 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP GlnD_UR_UTase PF08335.11 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.018 15.1 0.9 0.023 14.8 0.9 1.1 1 0 0 1 1 1 0 GlnD PII-uridylyltransferase Acyl-CoA_dh_N PF02771.16 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.097 13.3 0.1 18 6.0 0.0 2.1 1 1 1 2 2 2 0 Acyl-CoA dehydrogenase, N-terminal domain TPR_14 PF13428.6 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.1 13.5 2.0 0.44 11.5 0.3 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat ECSIT PF06239.11 NODE_56896_length_298_cov_51.885932_g48958_i0reverse_frame_1 - 0.14 11.3 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Evolutionarily conserved signalling intermediate in Toll pathway DUF5316 PF17247.2 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_1 - 0.008 16.2 0.2 4.4 7.4 0.0 2.1 2 0 0 2 2 2 2 Family of unknown function (DUF5316) DUF4769 PF15992.5 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_1 - 0.02 14.7 5.8 0.024 14.5 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) TMEM65 PF10507.9 NODE_56893_length_298_cov_55.346008_g48955_i0forward_frame_1 - 0.082 12.9 0.0 0.096 12.6 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 65 HAP2-GCS1 PF10699.9 NODE_56893_length_298_cov_55.346008_g48955_i0forward_frame_1 - 0.23 11.5 0.7 0.23 11.5 0.7 2.8 3 0 0 3 3 3 0 Male gamete fusion factor DUF4093 PF13331.6 NODE_56888_length_298_cov_66.349810_g48950_i0reverse_frame_1 - 0.016 15.6 0.0 0.021 15.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) YidD PF01809.18 NODE_56880_length_298_cov_71.790875_g48942_i0reverse_frame_1 - 8.8 6.3 8.1 0.68 9.9 1.1 2.4 2 1 1 3 3 3 0 Putative membrane protein insertion efficiency factor ECF_trnsprt PF12822.7 NODE_56876_length_298_cov_79.699620_g48938_i0reverse_frame_1 - 0.022 14.9 0.6 0.031 14.4 0.6 1.1 1 0 0 1 1 1 0 ECF transporter, substrate-specific component Na_H_Exchanger PF00999.21 NODE_56876_length_298_cov_79.699620_g48938_i0reverse_frame_1 - 0.033 13.0 0.0 0.04 12.7 0.0 1.0 1 0 0 1 1 1 0 Sodium/hydrogen exchanger family DUF4013 PF13197.6 NODE_56873_length_298_cov_85.615970_g48935_i0reverse_frame_1 - 0.17 11.7 0.2 0.17 11.7 0.2 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4013) DUF5474 PF17568.2 NODE_56872_length_298_cov_85.798479_g48934_i0reverse_frame_1 - 0.0051 16.9 0.2 0.007 16.4 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5474) DUF3671 PF12420.8 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_1 - 0.02 14.9 3.5 0.024 14.7 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF5472 PF17566.2 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_1 - 0.064 13.2 0.2 0.1 12.6 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5472) TPR_2 PF07719.17 NODE_56866_length_298_cov_103.148289_g48928_i0reverse_frame_1 - 0.044 13.9 1.6 0.1 12.8 0.1 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_56866_length_298_cov_103.148289_g48928_i0reverse_frame_1 - 0.075 13.3 0.4 0.14 12.4 0.4 1.4 1 1 0 1 1 1 0 Tetratricopeptide repeat GSH_synth_ATP PF03917.17 NODE_56861_length_298_cov_128.927757_g48923_i0reverse_frame_1 - 0.0038 16.0 0.3 0.0041 15.9 0.3 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Ribonuc_2-5A PF06479.12 NODE_56860_length_298_cov_164.600760_g48922_i0reverse_frame_1 - 0.022 14.9 1.0 0.025 14.7 1.0 1.2 1 0 0 1 1 1 0 Ribonuclease 2-5A Arm-DNA-bind_3 PF13356.6 NODE_56858_length_298_cov_182.673004_g48920_i0reverse_frame_1 - 0.085 13.2 0.1 0.098 13.0 0.1 1.2 1 0 0 1 1 1 0 Arm DNA-binding domain Fer2 PF00111.27 NODE_56850_length_298_cov_5469.707224_g48912_i0reverse_frame_1 - 1.5e-05 24.8 0.5 3e-05 23.9 0.1 1.7 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain DUF4187 PF13821.6 NODE_56850_length_298_cov_5469.707224_g48912_i0reverse_frame_1 - 7.3 6.5 7.4 1.9 8.3 2.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4187) AGTRAP PF06396.11 NODE_56846_length_299_cov_0.965909_g48908_i0reverse_frame_1 - 0.05 13.4 0.1 0.056 13.3 0.1 1.1 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) ABC2_membrane_3 PF12698.7 NODE_56846_length_299_cov_0.965909_g48908_i0forward_frame_1 - 4.1e-10 39.3 2.4 4.5e-10 39.2 2.4 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein RseC_MucC PF04246.12 NODE_56846_length_299_cov_0.965909_g48908_i0forward_frame_1 - 0.3 11.0 1.3 9 6.3 0.0 2.0 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC Usg PF06233.12 NODE_56844_length_299_cov_1.181818_g48906_i0reverse_frame_1 - 0.14 12.3 0.0 0.4 10.9 0.0 1.7 1 1 1 2 2 2 0 Usg-like family DUF2345 PF10106.9 NODE_56844_length_299_cov_1.181818_g48906_i0forward_frame_1 - 0.093 12.6 0.2 0.11 12.4 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2345) UPF0449 PF15136.6 NODE_56844_length_299_cov_1.181818_g48906_i0forward_frame_1 - 0.21 12.1 2.1 0.28 11.7 2.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 G-7-MTase PF12803.7 NODE_56835_length_299_cov_1.446970_g48897_i0reverse_frame_1 - 0.032 13.4 0.1 0.036 13.3 0.1 1.1 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) RNA_pol_RpbG PF16992.5 NODE_56835_length_299_cov_1.446970_g48897_i0forward_frame_1 - 0.051 13.6 0.0 0.053 13.6 0.0 1.3 1 1 0 1 1 1 0 DNA-directed RNA polymerase, subunit G DUF4330 PF14221.6 NODE_56832_length_299_cov_1.530303_g48894_i0forward_frame_1 - 0.016 15.4 0.0 0.019 15.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) SSP160 PF06933.11 NODE_56832_length_299_cov_1.530303_g48894_i0forward_frame_1 - 0.024 12.8 7.4 0.025 12.8 7.4 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 HemY_N PF07219.13 NODE_56832_length_299_cov_1.530303_g48894_i0forward_frame_1 - 0.19 12.0 0.1 0.24 11.6 0.1 1.1 1 0 0 1 1 1 0 HemY protein N-terminus DUF515 PF04415.12 NODE_56832_length_299_cov_1.530303_g48894_i0forward_frame_1 - 0.4 9.0 3.6 0.45 8.9 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Sporozoite_P67 PF05642.11 NODE_56832_length_299_cov_1.530303_g48894_i0forward_frame_1 - 0.47 8.5 5.4 0.51 8.4 5.4 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF3446 PF11928.8 NODE_56832_length_299_cov_1.530303_g48894_i0forward_frame_1 - 1.3 9.4 11.6 1.8 8.9 11.4 1.5 1 1 0 1 1 1 0 Early growth response N-terminal domain DUF5489 PF17592.2 NODE_56824_length_299_cov_1.848485_g48886_i0forward_frame_1 - 0.045 14.3 1.1 0.045 14.3 1.1 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5489) IL17 PF06083.11 NODE_56822_length_299_cov_1.928030_g48884_i0forward_frame_1 - 0.026 15.0 0.3 0.033 14.7 0.3 1.2 1 0 0 1 1 1 0 Interleukin-17 ASC PF00858.24 NODE_56820_length_299_cov_1.946970_g48882_i0forward_frame_1 - 0.081 11.9 0.4 0.089 11.7 0.4 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel zf-C3HC4_4 PF15227.6 NODE_56819_length_299_cov_1.958333_g48881_i0reverse_frame_1 - 0.044 14.0 0.2 0.044 14.0 0.2 1.8 3 0 0 3 3 3 0 zinc finger of C3HC4-type, RING Spermine_synth PF01564.17 NODE_56819_length_299_cov_1.958333_g48881_i0forward_frame_1 - 0.15 11.4 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 Spermine/spermidine synthase domain NB PF04159.13 NODE_56818_length_299_cov_2.007576_g48880_i0reverse_frame_1 - 0.013 15.5 0.1 0.018 15.0 0.1 1.2 1 0 0 1 1 1 0 NB glycoprotein Asp4 PF16996.5 NODE_56816_length_299_cov_2.068182_g48878_i0forward_frame_1 - 0.058 13.2 0.1 0.092 12.5 0.1 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 C-C_Bond_Lyase PF15617.6 NODE_56808_length_299_cov_2.340909_g48870_i0reverse_frame_1 - 0.049 12.8 0.1 0.057 12.6 0.1 1.0 1 0 0 1 1 1 0 C-C_Bond_Lyase of the TIM-Barrel fold SPAN-X PF07458.12 NODE_56807_length_299_cov_2.359848_g48869_i0reverse_frame_1 - 0.12 12.8 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Sperm protein associated with nucleus, mapped to X chromosome DUF1689 PF07954.11 NODE_56803_length_299_cov_2.640152_g48865_i0reverse_frame_1 - 0.02 15.3 1.0 0.023 15.1 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1689) RF-1 PF00472.20 NODE_56803_length_299_cov_2.640152_g48865_i0reverse_frame_1 - 0.063 13.2 3.7 0.085 12.8 3.7 1.2 1 0 0 1 1 1 0 RF-1 domain DUF3701 PF12482.8 NODE_56802_length_299_cov_2.659091_g48864_i0forward_frame_1 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Phage integrase protein DUF3251 PF11622.8 NODE_56793_length_299_cov_3.458333_g48855_i0reverse_frame_1 - 0.032 13.9 0.7 0.039 13.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3251) Allexi_40kDa PF05549.11 NODE_56793_length_299_cov_3.458333_g48855_i0reverse_frame_1 - 0.1 12.1 0.5 0.11 12.0 0.5 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein TMF_DNA_bd PF12329.8 NODE_56793_length_299_cov_3.458333_g48855_i0reverse_frame_1 - 0.16 12.0 4.9 0.24 11.4 4.9 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding GPS2_interact PF15784.5 NODE_56793_length_299_cov_3.458333_g48855_i0reverse_frame_1 - 2.4 8.6 7.4 1.1 9.7 0.2 2.2 1 1 1 2 2 2 0 G-protein pathway suppressor 2-interacting domain DUF2457 PF10446.9 NODE_56784_length_299_cov_45.871212_g48846_i0reverse_frame_1 - 0.36 9.9 5.7 0.4 9.8 5.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) TMPIT PF07851.13 NODE_56779_length_299_cov_57.750000_g48841_i0reverse_frame_1 - 0.0094 15.2 1.8 0.01 15.1 1.8 1.2 1 0 0 1 1 1 1 TMPIT-like protein Endothelin PF00322.17 NODE_56779_length_299_cov_57.750000_g48841_i0forward_frame_1 - 0.046 13.3 0.5 0.082 12.5 0.5 1.4 1 0 0 1 1 1 0 Endothelin family DUF4299 PF14132.6 NODE_56772_length_299_cov_68.556818_g48834_i0forward_frame_1 - 0.058 12.8 0.1 0.063 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4299) ABC2_membrane_3 PF12698.7 NODE_56769_length_299_cov_70.795455_g48831_i0reverse_frame_1 - 0.4 9.7 2.1 0.48 9.5 2.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Tcp10_C PF07202.13 NODE_56764_length_299_cov_76.314394_g48826_i0reverse_frame_1 - 1.7e-06 28.1 0.1 1.9e-06 27.9 0.1 1.1 1 0 0 1 1 1 1 T-complex protein 10 C-terminus DUF3895 PF13034.6 NODE_56764_length_299_cov_76.314394_g48826_i0reverse_frame_1 - 0.43 10.6 2.6 0.34 10.9 0.8 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3895) Paired_CXXCH_1 PF09699.10 NODE_56752_length_299_cov_155.363636_g48814_i0forward_frame_1 - 0.0048 16.6 0.2 0.01 15.6 0.2 1.5 1 0 0 1 1 1 1 Doubled CXXCH motif (Paired_CXXCH_1) Lem_TRP PF08262.11 NODE_56745_length_299_cov_2973.776515_g48807_i0forward_frame_1 - 3.6 7.8 5.4 74 3.7 0.4 4.1 4 0 0 4 4 4 0 Leucophaea maderae tachykinin-related peptide Cdc13_OB2 PF18691.1 NODE_56741_length_300_cov_0.973585_g48803_i0forward_frame_1 - 0.047 13.8 0.4 1.5 8.9 0.1 2.0 2 0 0 2 2 2 0 Cell division control protein 13, OB2 domain DUF4106 PF13388.6 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_1 - 1.4 8.1 3.9 1.6 7.9 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) Chordopox_G3 PF06129.12 NODE_56728_length_300_cov_1.554717_g48790_i0reverse_frame_1 - 3 8.6 5.6 1.2 9.9 1.8 1.9 1 1 1 2 2 2 0 Chordopoxvirus G3 protein DUF4716 PF15837.5 NODE_56727_length_300_cov_1.573585_g48789_i0forward_frame_1 - 0.23 11.6 1.8 0.26 11.4 0.9 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) Oxidored_q5_N PF01059.17 NODE_56724_length_300_cov_1.622642_g48786_i0reverse_frame_1 - 0.094 12.8 0.3 0.14 12.3 0.3 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus KASH_CCD PF14662.6 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.0039 17.1 5.8 0.0046 16.8 5.8 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH APG6_N PF17675.1 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.0044 17.5 4.1 0.0049 17.4 4.1 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region CENP-F_N PF10481.9 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.0046 16.6 5.1 0.087 12.5 1.4 2.1 1 1 1 2 2 2 2 Cenp-F N-terminal domain Troponin PF00992.20 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.008 16.5 6.7 0.01 16.1 6.7 1.1 1 0 0 1 1 1 1 Troponin DUF3450 PF11932.8 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.027 13.8 3.1 0.028 13.7 3.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) bZIP_1 PF00170.21 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.037 14.1 9.5 0.04 14.0 8.1 1.8 1 1 1 2 2 2 0 bZIP transcription factor HALZ PF02183.18 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.074 13.3 8.6 3.1 8.1 2.8 2.5 1 1 1 2 2 2 0 Homeobox associated leucine zipper DivIC PF04977.15 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.094 12.5 7.7 0.28 11.0 2.5 2.3 1 1 1 2 2 2 0 Septum formation initiator FlxA PF14282.6 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.27 11.2 4.4 0.34 10.9 4.2 1.4 1 1 0 1 1 1 0 FlxA-like protein GIT_CC PF16559.5 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.28 11.1 7.3 0.24 11.3 2.4 2.1 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor YabA PF06156.13 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.37 11.4 6.4 0.7 10.6 6.4 1.5 1 1 0 1 1 1 0 Initiation control protein YabA DUF724 PF05266.14 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.4 10.5 5.2 0.45 10.3 5.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) FtsL PF04999.13 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 0.54 10.3 5.3 1.2 9.2 2.3 2.1 1 1 1 2 2 2 0 Cell division protein FtsL M PF02370.16 NODE_56723_length_300_cov_1.656604_g48785_i0reverse_frame_1 - 5.3 7.9 9.1 0.78 10.5 1.0 3.1 3 1 0 3 3 2 0 M protein repeat DUF4817 PF16087.5 NODE_56716_length_300_cov_1.800000_g48778_i0reverse_frame_1 - 0.15 11.8 0.1 0.28 11.0 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) cNMP_binding PF00027.29 NODE_56713_length_300_cov_1.954717_g48775_i0forward_frame_1 - 1.1e-17 63.9 0.0 1.3e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MTCP1 PF08991.10 NODE_56711_length_300_cov_2.000000_g48773_i0forward_frame_1 - 0.0043 17.2 1.1 0.0091 16.2 1.1 1.7 1 1 0 1 1 1 1 Mature-T-Cell Proliferation I type rve PF00665.26 NODE_56710_length_300_cov_2.003774_g48772_i0reverse_frame_1 - 8.5e-05 22.7 0.0 0.0001 22.5 0.0 1.1 1 0 0 1 1 1 1 Integrase core domain ecTbetaR2 PF08917.10 NODE_56710_length_300_cov_2.003774_g48772_i0reverse_frame_1 - 0.049 13.6 0.1 0.061 13.3 0.1 1.2 1 0 0 1 1 1 0 Transforming growth factor beta receptor 2 ectodomain Dynactin_p22 PF07426.11 NODE_56709_length_300_cov_2.007547_g48771_i0forward_frame_1 - 0.00062 19.7 3.7 0.00068 19.5 3.7 1.0 1 0 0 1 1 1 1 Dynactin subunit p22 HALZ PF02183.18 NODE_56709_length_300_cov_2.007547_g48771_i0forward_frame_1 - 0.011 16.0 14.3 0.13 12.5 0.9 3.3 1 1 2 3 3 3 0 Homeobox associated leucine zipper DUF4472 PF14739.6 NODE_56709_length_300_cov_2.007547_g48771_i0forward_frame_1 - 0.018 15.8 7.4 0.022 15.5 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4472) DUF5126 PF17166.4 NODE_56709_length_300_cov_2.007547_g48771_i0forward_frame_1 - 0.021 14.7 0.9 0.089 12.7 0.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF5126) UPF0242 PF06785.11 NODE_56709_length_300_cov_2.007547_g48771_i0forward_frame_1 - 0.22 11.6 10.2 0.28 11.3 10.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3287 PF11690.8 NODE_56709_length_300_cov_2.007547_g48771_i0forward_frame_1 - 0.32 10.7 5.9 0.17 11.6 2.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3287) DUF2951 PF11166.8 NODE_56709_length_300_cov_2.007547_g48771_i0forward_frame_1 - 0.51 10.6 9.8 0.33 11.2 8.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2951) Sas10 PF09368.10 NODE_56709_length_300_cov_2.007547_g48771_i0forward_frame_1 - 1.1 9.8 9.4 1.1 9.8 0.6 2.2 1 1 1 2 2 2 0 Sas10 C-terminal domain FapA PF03961.13 NODE_56709_length_300_cov_2.007547_g48771_i0forward_frame_1 - 1.4 7.5 7.9 1.5 7.3 7.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A PorB PF11565.8 NODE_56708_length_300_cov_2.022642_g48770_i0forward_frame_1 - 0.11 12.9 0.1 0.14 12.6 0.1 1.1 1 0 0 1 1 1 0 Alpha helical Porin B DUF3346 PF11826.8 NODE_56701_length_300_cov_2.237736_g48763_i0reverse_frame_1 - 0.043 13.6 0.1 0.057 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) Cucumo_2B PF03263.13 NODE_56697_length_300_cov_2.460377_g48759_i0reverse_frame_1 - 0.19 12.2 0.3 0.4 11.2 0.2 1.6 1 1 0 1 1 1 0 Cucumovirus protein 2B 2TM PF13239.6 NODE_56694_length_300_cov_2.524528_g48756_i0forward_frame_1 - 0.14 12.5 5.6 0.25 11.6 5.6 1.4 1 0 0 1 1 1 0 2TM domain Dec-1 PF04624.14 NODE_56692_length_300_cov_2.577358_g48754_i0forward_frame_1 - 5.5 6.9 5.5 19 5.2 0.2 2.2 2 0 0 2 2 2 0 Dec-1 repeat PagP PF07017.11 NODE_56690_length_300_cov_2.683019_g48752_i0reverse_frame_1 - 3.1e-21 75.3 0.6 3.9e-21 75.0 0.6 1.1 1 0 0 1 1 1 1 Antimicrobial peptide resistance and lipid A acylation protein PagP DUF4131 PF13567.6 NODE_56689_length_300_cov_2.754717_g48751_i0forward_frame_1 - 0.021 14.5 7.0 0.022 14.4 7.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Wzy_C PF04932.15 NODE_56689_length_300_cov_2.754717_g48751_i0forward_frame_1 - 0.096 12.3 1.3 0.1 12.2 1.3 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF4307 PF14155.6 NODE_56689_length_300_cov_2.754717_g48751_i0forward_frame_1 - 0.15 11.9 0.2 0.28 11.0 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4307) Glucos_trans_II PF14264.6 NODE_56689_length_300_cov_2.754717_g48751_i0forward_frame_1 - 1.2 8.4 7.6 1.4 8.2 7.6 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII UPF0515 PF15135.6 NODE_56683_length_300_cov_3.011321_g48745_i0reverse_frame_1 - 2 7.7 10.2 2.3 7.5 10.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 WASH-7_mid PF14744.6 NODE_56681_length_300_cov_3.105660_g48743_i0reverse_frame_1 - 7.9e-11 41.6 0.2 9e-11 41.4 0.2 1.0 1 0 0 1 1 1 1 WASH complex subunit 7 DUF327 PF03885.13 NODE_56681_length_300_cov_3.105660_g48743_i0reverse_frame_1 - 0.072 13.1 0.3 9.6 6.2 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF327) MOZART2 PF12926.7 NODE_56680_length_300_cov_3.222642_g48742_i0forward_frame_1 - 0.092 12.4 1.5 0.14 11.8 0.6 1.8 1 1 1 2 2 2 0 Mitotic-spindle organizing gamma-tubulin ring associated ECD PF18432.1 NODE_56680_length_300_cov_3.222642_g48742_i0forward_frame_1 - 0.13 12.2 0.5 2.1 8.4 0.2 2.0 1 1 1 2 2 2 0 Extracellular Cadherin domain Cwf_Cwc_15 PF04889.12 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 0.0021 17.8 11.0 0.0026 17.6 11.0 1.1 1 0 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein PRMT5 PF05185.16 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 0.012 15.4 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase TDA11 PF17084.5 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 0.084 11.8 4.5 0.089 11.7 4.5 1.1 1 0 0 1 1 1 0 Topoisomerase I damage affected protein 11 PRP1_N PF06424.12 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 0.16 12.3 7.8 0.18 12.2 7.8 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal TCTP PF00838.17 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 1.2 9.4 8.2 1.5 9.1 8.2 1.1 1 0 0 1 1 1 0 Translationally controlled tumour protein RR_TM4-6 PF06459.12 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 1.8 8.3 9.7 2 8.2 9.7 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CRA PF06589.11 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_1 - 8.2 6.6 15.8 12 6.1 15.8 1.2 1 1 0 1 1 1 0 Circumsporozoite-related antigen (CRA) OsmC PF02566.19 NODE_56665_length_300_cov_49.720755_g48727_i0reverse_frame_1 - 0.089 13.3 0.7 0.13 12.8 0.7 1.5 1 1 0 1 1 1 0 OsmC-like protein CEBP_ZZ PF16366.5 NODE_56659_length_300_cov_57.762264_g48721_i0reverse_frame_1 - 1.9 8.8 6.7 11 6.4 0.0 2.3 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Peptidase_S49 PF01343.18 NODE_56659_length_300_cov_57.762264_g48721_i0forward_frame_1 - 0.029 14.3 0.4 0.036 14.0 0.4 1.1 1 0 0 1 1 1 0 Peptidase family S49 DUF3270 PF11674.8 NODE_56655_length_300_cov_60.286792_g48717_i0reverse_frame_1 - 0.089 13.0 0.4 0.11 12.6 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) Phage_TAC_5 PF08890.11 NODE_56654_length_300_cov_65.256604_g48716_i0reverse_frame_1 - 0.15 12.0 8.8 0.044 13.8 6.2 1.5 1 1 0 1 1 1 0 Phage XkdN-like tail assembly chaperone protein, TAC NUFIP2 PF15293.6 NODE_56654_length_300_cov_65.256604_g48716_i0reverse_frame_1 - 0.2 10.5 6.0 0.22 10.4 6.0 1.0 1 0 0 1 1 1 0 Nuclear fragile X mental retardation-interacting protein 2 Cortex-I_coil PF09304.10 NODE_56654_length_300_cov_65.256604_g48716_i0reverse_frame_1 - 1.5 9.1 8.6 0.041 14.1 2.7 1.4 2 0 0 2 2 2 0 Cortexillin I, coiled coil Sas10 PF09368.10 NODE_56648_length_300_cov_77.362264_g48710_i0reverse_frame_1 - 0.0014 19.1 0.0 0.0014 19.1 0.0 2.1 2 1 0 2 2 2 1 Sas10 C-terminal domain DUF3593 PF12159.8 NODE_56648_length_300_cov_77.362264_g48710_i0forward_frame_1 - 0.042 13.9 0.1 0.055 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3593) Thx PF17070.5 NODE_56645_length_300_cov_90.501887_g48707_i0reverse_frame_1 - 2.1 8.6 7.9 11 6.3 0.0 2.8 3 0 0 3 3 3 0 30S ribosomal protein Thx P5-ATPase PF12409.8 NODE_56644_length_300_cov_93.173585_g48706_i0forward_frame_1 - 0.52 10.4 5.4 0.71 10.0 5.4 1.1 1 0 0 1 1 1 0 P5-type ATPase cation transporter TRAM_LAG1_CLN8 PF03798.16 NODE_56637_length_300_cov_144.626415_g48699_i0reverse_frame_1 - 0.0011 18.7 0.6 0.0012 18.6 0.6 1.1 1 0 0 1 1 1 1 TLC domain TAP35_44 PF07265.11 NODE_56627_length_300_cov_341.203774_g48689_i0forward_frame_1 - 0.12 12.4 0.2 0.14 12.1 0.2 1.1 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 Fer2 PF00111.27 NODE_56620_length_300_cov_6264.596226_g48682_i0reverse_frame_1 - 1.8e-05 24.6 0.1 3e-05 23.9 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain UPF0047 PF01894.17 NODE_56620_length_300_cov_6264.596226_g48682_i0reverse_frame_1 - 0.058 13.5 0.0 0.064 13.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0047 DUF2155 PF09923.9 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_1 - 0.21 11.9 0.1 13 6.1 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2155) CHASE PF03924.13 NODE_56616_length_301_cov_1.037594_g48678_i0reverse_frame_3 - 0.072 13.0 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 CHASE domain NINJA_B PF16136.5 NODE_56616_length_301_cov_1.037594_g48678_i0reverse_frame_3 - 0.25 11.7 1.8 1.9 8.9 0.1 2.0 1 1 1 2 2 2 0 Putative nuclear localisation signal DUF5558 PF17713.1 NODE_56616_length_301_cov_1.037594_g48678_i0forward_frame_2 - 0.033 14.6 2.8 0.039 14.3 2.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5558) AGS_C PF18134.1 NODE_56614_length_301_cov_1.187970_g48676_i0reverse_frame_2 - 0.043 13.8 0.0 0.048 13.7 0.0 1.1 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks265.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks265.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks265.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks265.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GCS PF03074.16 NODE_56612_length_301_cov_1.203008_g48674_i0forward_frame_3 - 1.2e-22 80.8 0.4 1.3e-22 80.7 0.4 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase C2 PF00168.30 NODE_56610_length_301_cov_1.349624_g48672_i0reverse_frame_3 - 6e-18 65.0 0.0 6.9e-18 64.8 0.0 1.0 1 0 0 1 1 1 1 C2 domain baeRF_family7 PF18849.1 NODE_56608_length_301_cov_1.406015_g48670_i0reverse_frame_3 - 0.041 14.1 0.0 0.048 13.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 7 ubiquitin PF00240.23 NODE_56606_length_301_cov_1.443609_g48668_i0forward_frame_2 - 0.00028 20.6 0.0 0.00044 19.9 0.0 1.3 1 1 0 1 1 1 1 Ubiquitin family YukD PF08817.10 NODE_56606_length_301_cov_1.443609_g48668_i0forward_frame_2 - 0.00091 19.9 0.0 0.0011 19.6 0.0 1.2 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD AbrB PF05145.12 NODE_56604_length_301_cov_1.533835_g48666_i0reverse_frame_2 - 0.064 12.2 0.1 0.078 11.9 0.1 1.1 1 0 0 1 1 1 0 Transition state regulatory protein AbrB Securin PF04856.13 NODE_56602_length_301_cov_1.605263_g48664_i0forward_frame_3 - 0.11 12.4 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Securin sister-chromatid separation inhibitor TylF PF05711.11 NODE_56599_length_301_cov_1.703008_g48661_i0reverse_frame_2 - 0.085 12.1 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) OAD_gamma PF04277.13 NODE_56599_length_301_cov_1.703008_g48661_i0forward_frame_2 - 0.0076 16.8 4.8 0.013 16.1 4.8 1.4 1 0 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain FerA PF08165.11 NODE_56598_length_301_cov_1.751880_g48660_i0forward_frame_2 - 0.067 13.2 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 FerA (NUC095) domain Adeno_IVa2 PF02456.15 NODE_56597_length_301_cov_1.759398_g48659_i0forward_frame_2 - 0.11 11.3 0.1 0.14 11.0 0.1 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein R3H-assoc PF13902.6 NODE_56592_length_301_cov_1.857143_g48654_i0forward_frame_3 - 0.022 15.2 0.1 0.024 15.0 0.1 1.2 1 0 0 1 1 1 0 R3H-associated N-terminal domain FadR_C PF07840.12 NODE_56592_length_301_cov_1.857143_g48654_i0forward_frame_3 - 0.13 12.2 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 FadR C-terminal domain Ca_bind_SSO6904 PF18249.1 NODE_56589_length_301_cov_1.947368_g48651_i0forward_frame_3 - 0.059 13.7 2.9 0.15 12.5 0.5 2.0 1 1 1 2 2 2 0 Calcium binding protein SSO6904 DUF2785 PF10978.8 NODE_56589_length_301_cov_1.947368_g48651_i0forward_frame_3 - 0.085 12.6 0.0 0.099 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2785) CxC6 PF18721.1 NODE_56583_length_301_cov_2.124060_g48645_i0reverse_frame_2 - 0.0085 16.3 1.3 0.012 15.9 1.3 1.3 1 0 0 1 1 1 1 CxC6 like cysteine cluster associated with KDZ transposases Z1 PF10593.9 NODE_56576_length_301_cov_2.368421_g48638_i0reverse_frame_3 - 0.49 9.8 7.8 0.55 9.7 7.8 1.0 1 0 0 1 1 1 0 Z1 domain Tristanin_u2 PF16638.5 NODE_56576_length_301_cov_2.368421_g48638_i0reverse_frame_3 - 0.67 10.8 6.0 0.83 10.5 6.0 1.1 1 0 0 1 1 1 0 Unstructured region on methyltransferase between zinc-fingers DUF5040 PF16443.5 NODE_56574_length_301_cov_2.466165_g48636_i0reverse_frame_2 - 0.075 12.4 0.1 0.079 12.4 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5040) zf-LITAF-like PF10601.9 NODE_56574_length_301_cov_2.466165_g48636_i0forward_frame_3 - 0.016 15.5 2.4 0.016 15.5 2.4 1.7 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain TauE PF01925.19 NODE_56572_length_301_cov_2.563910_g48634_i0reverse_frame_2 - 0.0046 16.6 2.4 0.0054 16.4 2.4 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE AC_N PF16214.5 NODE_56572_length_301_cov_2.563910_g48634_i0reverse_frame_2 - 1.3 8.1 3.6 1.5 7.9 3.6 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region cNMP_binding PF00027.29 NODE_56569_length_301_cov_2.631579_g48631_i0reverse_frame_2 - 2.9e-06 27.2 0.0 7e-06 26.0 0.0 1.6 1 1 1 2 2 2 1 Cyclic nucleotide-binding domain Inhibitor_I69 PF13734.6 NODE_56565_length_301_cov_2.714286_g48627_i0reverse_frame_3 - 0.053 13.9 0.0 0.083 13.3 0.0 1.4 1 1 0 1 1 1 0 Spi protease inhibitor Bac_luciferase PF00296.20 NODE_56563_length_301_cov_2.774436_g48625_i0forward_frame_3 - 0.0084 15.6 0.0 0.018 14.5 0.0 1.5 2 0 0 2 2 2 1 Luciferase-like monooxygenase PriA_CRR PF18319.1 NODE_56562_length_301_cov_2.834586_g48624_i0reverse_frame_3 - 0.17 11.9 0.6 0.17 11.9 0.6 2.6 4 0 0 4 4 4 0 PriA DNA helicase Cys-rich region (CRR) domain zf_CCCH_4 PF18345.1 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.00026 21.0 5.6 0.00051 20.0 5.6 1.5 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.00038 21.1 0.1 0.00047 20.8 0.1 1.2 1 0 0 1 1 1 1 Torus domain zf-CCCH PF00642.24 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.00071 19.4 3.5 0.0012 18.7 3.5 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.0034 17.2 3.4 0.0055 16.5 3.4 1.4 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_3 PF15663.5 NODE_56562_length_301_cov_2.834586_g48624_i0forward_frame_2 - 0.0082 16.4 0.2 0.014 15.6 0.2 1.3 1 0 0 1 1 1 1 Zinc-finger containing family Sprouty PF05210.13 NODE_56559_length_301_cov_3.131579_g48621_i0reverse_frame_2 - 0.02 15.2 2.7 0.02 15.2 2.7 1.4 1 1 0 1 1 1 0 Sprouty protein (Spry) zf-C5HC2 PF02928.16 NODE_56558_length_301_cov_3.142857_g48620_i0reverse_frame_2 - 0.037 14.4 0.5 0.051 14.0 0.5 1.4 1 0 0 1 1 1 0 C5HC2 zinc finger Peptidase_S74 PF13884.6 NODE_56547_length_301_cov_23.924812_g48609_i0reverse_frame_3 - 4.1e-09 36.6 0.1 6.5e-09 36.0 0.1 1.3 1 0 0 1 1 1 1 Chaperone of endosialidase Trimer_CC PF08954.11 NODE_56547_length_301_cov_23.924812_g48609_i0reverse_frame_3 - 0.012 15.1 0.4 0.098 12.2 0.0 2.3 2 0 0 2 2 2 0 Trimerisation motif UCH PF00443.29 NODE_56545_length_301_cov_26.071429_g48607_i0reverse_frame_2 - 0.021 14.3 1.6 0.022 14.3 1.6 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Notch PF00066.17 NODE_56544_length_301_cov_30.312030_g48606_i0reverse_frame_2 - 0.058 13.9 1.0 0.058 13.9 1.0 1.7 2 0 0 2 2 2 0 LNR domain Cyclase_polyket PF04673.12 NODE_56540_length_301_cov_48.150376_g48602_i0reverse_frame_3 - 0.095 13.0 0.0 0.14 12.4 0.0 1.3 1 1 0 1 1 1 0 Polyketide synthesis cyclase Thioredoxin_12 PF18400.1 NODE_56534_length_301_cov_56.026316_g48596_i0reverse_frame_2 - 0.037 13.9 0.5 0.044 13.6 0.5 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Zn_Tnp_IS91 PF14319.6 NODE_56533_length_301_cov_56.552632_g48595_i0reverse_frame_3 - 3.2 7.9 14.5 0.23 11.5 9.5 1.7 1 1 1 2 2 2 0 Transposase zinc-binding domain DUF5333 PF17267.2 NODE_56530_length_301_cov_59.838346_g48592_i0forward_frame_2 - 0.039 14.1 0.7 0.059 13.6 0.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5333) UCH PF00443.29 NODE_56527_length_301_cov_62.011278_g48589_i0forward_frame_2 - 6e-13 48.9 0.3 6.7e-13 48.7 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Popeye PF04831.13 NODE_56526_length_301_cov_64.597744_g48588_i0reverse_frame_2 - 2.3 8.4 8.2 2.7 8.2 8.2 1.2 1 0 0 1 1 1 0 Popeye protein conserved region Ribosomal_L36e PF01158.18 NODE_56525_length_301_cov_64.894737_g48587_i0reverse_frame_2 - 1.2e-26 92.8 3.1 1.4e-26 92.6 3.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L36e Vac17 PF17321.2 NODE_56525_length_301_cov_64.894737_g48587_i0forward_frame_2 - 0.026 14.0 0.1 0.031 13.7 0.1 1.0 1 0 0 1 1 1 0 Vacuole-related protein 17 PLDc_N PF13396.6 NODE_56524_length_301_cov_67.432331_g48586_i0forward_frame_2 - 0.075 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Phospholipase_D-nuclease N-terminal MDH PF02315.16 NODE_56523_length_301_cov_68.522556_g48585_i0reverse_frame_2 - 0.019 15.0 0.1 0.027 14.5 0.1 1.3 1 0 0 1 1 1 0 Methanol dehydrogenase beta subunit SinI PF08671.10 NODE_56521_length_301_cov_74.924812_g48583_i0forward_frame_3 - 0.048 13.5 0.1 7.4 6.5 0.0 2.6 2 0 0 2 2 2 0 Anti-repressor SinI DUF4535 PF15054.6 NODE_56521_length_301_cov_74.924812_g48583_i0forward_frame_3 - 2.5 7.9 5.5 3.4 7.5 2.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) Tht1 PF04163.12 NODE_56518_length_301_cov_81.240602_g48580_i0reverse_frame_2 - 0.024 13.4 0.8 0.023 13.5 0.8 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein DUF2726 PF10881.8 NODE_56518_length_301_cov_81.240602_g48580_i0forward_frame_3 - 0.053 13.4 0.2 0.078 12.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2726) Chordopox_A13L PF05961.11 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.0023 18.1 0.1 0.0035 17.5 0.1 1.5 1 0 0 1 1 1 1 Chordopoxvirus A13L protein Phage_holin_3_6 PF07332.11 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.016 15.3 0.6 0.022 14.8 0.6 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Shisa PF13908.6 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.035 14.4 0.5 0.039 14.2 0.5 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator WBP-1 PF11669.8 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.038 14.6 0.1 0.045 14.4 0.1 1.3 1 0 0 1 1 1 0 WW domain-binding protein 1 Tetraspanin PF00335.20 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.056 13.1 0.2 0.07 12.8 0.2 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF4834 PF16118.5 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.09 13.7 0.6 0.09 13.7 0.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4834) HemY_N PF07219.13 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.11 12.7 0.2 0.16 12.2 0.2 1.2 1 0 0 1 1 1 0 HemY protein N-terminus EphA2_TM PF14575.6 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.17 12.8 0.3 0.17 12.8 0.3 1.7 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain TMEM132D_C PF15706.5 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.19 11.5 1.4 0.32 10.8 1.1 1.5 1 1 1 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Vpu PF00558.19 NODE_56517_length_301_cov_82.101504_g48579_i0reverse_frame_2 - 0.19 11.5 0.2 0.19 11.5 0.2 1.6 2 0 0 2 2 2 0 Vpu protein DUF4191 PF13829.6 NODE_56517_length_301_cov_82.101504_g48579_i0forward_frame_2 - 0.52 9.6 2.3 0.64 9.3 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Presenilin PF01080.17 NODE_56517_length_301_cov_82.101504_g48579_i0forward_frame_2 - 1 8.1 9.0 1.1 7.9 9.0 1.0 1 0 0 1 1 1 0 Presenilin Herpes_U59 PF04529.12 NODE_56515_length_301_cov_86.590226_g48577_i0forward_frame_3 - 0.04 13.0 0.1 0.041 12.9 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein DUF2142 PF09913.9 NODE_56514_length_301_cov_87.015038_g48576_i0reverse_frame_2 - 0.25 10.2 4.3 0.25 10.2 4.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) CH_2 PF06294.11 NODE_56514_length_301_cov_87.015038_g48576_i0forward_frame_2 - 0.00025 21.1 0.0 0.00032 20.8 0.0 1.2 1 0 0 1 1 1 1 CH-like domain in sperm protein LRRNT_2 PF08263.12 NODE_56514_length_301_cov_87.015038_g48576_i0forward_frame_2 - 0.085 13.2 0.6 0.14 12.4 0.6 1.5 1 1 0 1 1 1 0 Leucine rich repeat N-terminal domain Gp37 PF09646.10 NODE_56513_length_301_cov_87.815789_g48575_i0reverse_frame_2 - 0.023 14.5 0.0 0.031 14.1 0.0 1.2 1 0 0 1 1 1 0 Gp37 protein DUF1149 PF06619.11 NODE_56513_length_301_cov_87.815789_g48575_i0forward_frame_3 - 0.034 14.5 0.3 0.038 14.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1149) DUF5478 PF17572.2 NODE_56513_length_301_cov_87.815789_g48575_i0forward_frame_2 - 0.022 14.8 4.6 0.037 14.1 4.6 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5478) DUF3369 PF11849.8 NODE_56513_length_301_cov_87.815789_g48575_i0forward_frame_2 - 0.11 12.7 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3369) ARL2_Bind_BART PF11527.8 NODE_56512_length_301_cov_92.973684_g48574_i0reverse_frame_3 - 0.0014 18.7 0.0 0.0016 18.5 0.0 1.0 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART Rpr2 PF04032.16 NODE_56511_length_301_cov_92.973684_g48573_i0forward_frame_3 - 0.35 11.2 4.4 0.46 10.8 4.4 1.2 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF1214 PF06742.11 NODE_56510_length_301_cov_93.466165_g48572_i0reverse_frame_2 - 0.097 13.1 0.1 0.11 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1214) DUF3346 PF11826.8 NODE_56509_length_301_cov_95.387218_g48571_i0reverse_frame_3 - 0.094 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) DUF1952 PF09189.10 NODE_56509_length_301_cov_95.387218_g48571_i0reverse_frame_2 - 0.034 14.0 0.1 0.053 13.4 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1952) F-box-like PF12937.7 NODE_56509_length_301_cov_95.387218_g48571_i0forward_frame_3 - 0.094 12.6 0.5 0.15 12.0 0.5 1.3 1 0 0 1 1 1 0 F-box-like CBM_19 PF03427.13 NODE_56508_length_301_cov_96.409774_g48570_i0forward_frame_2 - 0.17 11.9 0.9 0.24 11.4 0.5 1.5 1 1 0 1 1 1 0 Carbohydrate binding domain (family 19) PARG_cat PF05028.14 NODE_56507_length_301_cov_101.872180_g48569_i0forward_frame_2 - 0.0081 15.5 0.9 0.0092 15.3 0.9 1.0 1 0 0 1 1 1 1 Poly (ADP-ribose) glycohydrolase (PARG) Bradykinin PF06753.12 NODE_56506_length_301_cov_105.071429_g48568_i0reverse_frame_2 - 0.024 14.3 0.2 0.037 13.7 0.2 1.3 1 0 0 1 1 1 0 Bradykinin Polyhedrin PF00738.18 NODE_56504_length_301_cov_136.545113_g48566_i0reverse_frame_3 - 2.6 7.3 7.0 0.43 9.9 3.4 1.5 1 1 1 2 2 2 0 Polyhedrin Bax1-I PF01027.20 NODE_56503_length_301_cov_139.214286_g48565_i0reverse_frame_2 - 3.4e-13 49.9 14.0 3.7e-13 49.8 14.0 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 UCR_hinge PF02320.16 NODE_56499_length_301_cov_165.319549_g48561_i0reverse_frame_2 - 1.7e-10 40.9 0.2 1.7e-10 40.9 0.2 1.9 2 0 0 2 2 2 1 Ubiquinol-cytochrome C reductase hinge protein Atx10homo_assoc PF09759.9 NODE_56493_length_301_cov_315.218045_g48555_i0reverse_frame_2 - 0.11 12.5 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Spinocerebellar ataxia type 10 protein domain HMG_box PF00505.19 NODE_56492_length_301_cov_485.443609_g48554_i0reverse_frame_3 - 0.0052 17.2 0.0 0.0081 16.6 0.0 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box Dickkopf_N PF04706.12 NODE_56482_length_302_cov_1.239700_g48544_i0reverse_frame_3 - 5.5 7.5 21.7 0.67 10.5 3.3 4.1 2 2 2 4 4 4 0 Dickkopf N-terminal cysteine-rich region Opy2 PF09463.10 NODE_56482_length_302_cov_1.239700_g48544_i0reverse_frame_3 - 6.2 7.2 23.9 0.77 10.1 7.1 3.7 3 2 1 4 4 4 0 Opy2 protein His_Phos_2 PF00328.22 NODE_56481_length_302_cov_1.243446_g48543_i0forward_frame_3 - 0.00078 18.9 0.0 0.00089 18.7 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Caud_tail_N PF16838.5 NODE_56481_length_302_cov_1.243446_g48543_i0forward_frame_3 - 0.066 13.6 0.1 0.071 13.5 0.1 1.2 1 0 0 1 1 1 0 Caudoviral major tail protein N-terminus Fe_hyd_SSU PF02256.17 NODE_56481_length_302_cov_1.243446_g48543_i0forward_frame_3 - 0.07 13.2 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Iron hydrogenase small subunit Chitin_synth_1 PF01644.17 NODE_56480_length_302_cov_1.303371_g48542_i0forward_frame_2 - 0.00053 20.0 0.0 0.00064 19.7 0.0 1.1 1 0 0 1 1 1 1 Chitin synthase Ribosomal_L27_C PF18471.1 NODE_56471_length_302_cov_1.655431_g48533_i0reverse_frame_3 - 0.0025 17.3 0.2 0.0028 17.1 0.2 1.2 1 0 0 1 1 1 1 Ribosomal L27 protein C-terminal domain Protamine_P1 PF00260.20 NODE_56470_length_302_cov_1.685393_g48532_i0forward_frame_3 - 0.0071 16.4 1.9 0.014 15.5 1.9 1.4 1 0 0 1 1 1 1 Protamine P1 COX6B PF02297.17 NODE_56470_length_302_cov_1.685393_g48532_i0forward_frame_3 - 0.022 15.0 0.1 0.032 14.5 0.1 1.2 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIb L27_2 PF09045.10 NODE_56470_length_302_cov_1.685393_g48532_i0forward_frame_3 - 0.15 12.0 0.0 0.27 11.2 0.0 1.3 1 0 0 1 1 1 0 L27_2 SieB PF14163.6 NODE_56469_length_302_cov_1.700375_g48531_i0forward_frame_3 - 3.4 7.1 6.3 0.82 9.1 2.9 1.6 1 1 1 2 2 2 0 Super-infection exclusion protein B Fer4_4 PF12800.7 NODE_56464_length_302_cov_1.928839_g48526_i0forward_frame_2 - 3.2 8.5 8.2 3.8 8.3 6.0 2.4 2 1 0 2 2 2 0 4Fe-4S binding domain IL3Ra_N PF18611.1 NODE_56463_length_302_cov_1.966292_g48525_i0reverse_frame_2 - 0.078 13.0 0.5 0.12 12.3 0.5 1.4 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain CHAP PF05257.16 NODE_56460_length_302_cov_2.078652_g48522_i0reverse_frame_2 - 0.13 12.9 1.5 0.18 12.4 1.5 1.2 1 0 0 1 1 1 0 CHAP domain SAGA-Tad1 PF12767.7 NODE_56458_length_302_cov_2.198502_g48520_i0reverse_frame_2 - 0.076 12.7 0.0 0.076 12.7 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit zf-B_box PF00643.24 NODE_56456_length_302_cov_2.235955_g48518_i0forward_frame_3 - 0.011 15.9 1.5 0.021 14.9 1.5 1.5 1 0 0 1 1 1 0 B-box zinc finger Histone_HNS PF00816.21 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 2.3e-18 66.8 1.9 2.8e-18 66.5 1.9 1.2 1 0 0 1 1 1 1 H-NS histone family DUF4164 PF13747.6 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.022 15.1 3.0 0.025 14.8 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) DUF3037 PF11236.8 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.023 15.1 0.7 0.031 14.7 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3037) PaaX_C PF08223.11 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.035 14.4 0.0 0.043 14.1 0.0 1.2 1 0 0 1 1 1 0 PaaX-like protein C-terminal domain HAUS-augmin3 PF14932.6 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.038 13.6 1.0 0.042 13.4 1.0 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 TetR_C_24 PF17932.1 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.043 14.1 0.6 0.057 13.7 0.6 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain ACCA PF03255.14 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.095 12.6 1.1 0.13 12.2 1.1 1.1 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Swi5 PF07061.11 NODE_56453_length_302_cov_2.273408_g48515_i0reverse_frame_2 - 0.17 12.0 3.3 0.097 12.8 1.5 1.5 2 0 0 2 2 2 0 Swi5 PTS_2-RNA PF01885.16 NODE_56449_length_302_cov_2.602996_g48511_i0reverse_frame_3 - 6.1e-07 29.7 0.0 6.8e-07 29.5 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Axin_b-cat_bind PF08833.10 NODE_56447_length_302_cov_2.681648_g48509_i0reverse_frame_2 - 0.24 11.6 3.2 4.1 7.6 3.2 2.3 1 1 0 1 1 1 0 Axin beta-catenin binding domain AbiGi PF10899.8 NODE_56445_length_302_cov_3.617978_g48507_i0forward_frame_2 - 0.022 14.6 0.1 0.023 14.6 0.1 1.2 1 0 0 1 1 1 0 Putative abortive phage resistance protein AbiGi, antitoxin cEGF PF12662.7 NODE_56443_length_302_cov_3.771536_g48505_i0reverse_frame_2 - 0.18 11.8 0.2 0.18 11.8 0.2 2.1 2 1 0 2 2 2 0 Complement Clr-like EGF-like DUF456 PF04306.13 NODE_56439_length_302_cov_4.760300_g48501_i0reverse_frame_2 - 0.16 12.2 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF456) WCCH PF03716.14 NODE_56439_length_302_cov_4.760300_g48501_i0forward_frame_3 - 0.015 14.9 4.4 0.035 13.8 4.4 1.6 1 0 0 1 1 1 0 WCCH motif 3-HAO PF06052.12 NODE_56438_length_302_cov_5.842697_g48500_i0forward_frame_2 - 0.15 11.7 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 3-hydroxyanthranilic acid dioxygenase Ureide_permease PF07168.11 NODE_56436_length_302_cov_11.943820_g48498_i0forward_frame_2 - 9.7 4.8 6.8 12 4.6 6.8 1.0 1 0 0 1 1 1 0 Ureide permease zf-CCCH PF00642.24 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 3e-08 33.4 7.6 4.6e-08 32.8 7.6 1.3 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 8e-05 22.3 9.2 0.00012 21.8 9.2 1.2 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 0.00012 22.0 7.9 0.00025 21.0 7.9 1.6 1 1 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 0.00027 21.6 3.1 0.00027 21.6 3.1 1.4 1 1 0 1 1 1 1 Torus domain zf-CCCH_2 PF14608.6 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 0.019 15.4 7.7 0.033 14.7 7.7 1.4 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger MFA1_2 PF17317.2 NODE_56430_length_302_cov_33.164794_g48492_i0forward_frame_2 - 0.17 11.7 0.6 0.17 11.7 0.6 1.7 2 0 0 2 2 2 0 Mating hormone A-factor 1&2 Rab5ip PF07019.12 NODE_56428_length_302_cov_40.157303_g48490_i0forward_frame_3 - 0.031 14.9 0.3 0.062 13.9 0.1 1.6 2 0 0 2 2 2 0 Rab5-interacting protein (Rab5ip) Cytochrome-c551 PF10643.9 NODE_56428_length_302_cov_40.157303_g48490_i0forward_frame_3 - 0.19 11.3 0.5 0.25 10.9 0.5 1.2 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 VWA_3 PF13768.6 NODE_56423_length_302_cov_50.359551_g48485_i0reverse_frame_2 - 0.017 15.0 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 von Willebrand factor type A domain Y_phosphatase PF00102.27 NODE_56423_length_302_cov_50.359551_g48485_i0forward_frame_3 - 0.081 12.5 0.1 0.097 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Lactococcin_972 PF09683.10 NODE_56421_length_302_cov_53.625468_g48483_i0reverse_frame_3 - 0.073 13.6 0.2 0.11 13.1 0.2 1.2 1 0 0 1 1 1 0 Bacteriocin (Lactococcin_972) Ribosomal_L37ae PF01780.19 NODE_56419_length_302_cov_53.913858_g48481_i0reverse_frame_3 - 0.063 13.4 1.0 0.086 12.9 0.7 1.3 1 1 0 1 1 1 0 Ribosomal L37ae protein family p450 PF00067.22 NODE_56419_length_302_cov_53.913858_g48481_i0reverse_frame_2 - 2.2e-11 43.2 0.0 2.3e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 FtsH_ext PF06480.15 NODE_56419_length_302_cov_53.913858_g48481_i0forward_frame_3 - 0.054 13.9 0.6 0.08 13.3 0.6 1.3 1 0 0 1 1 1 0 FtsH Extracellular DUF5326 PF17260.2 NODE_56416_length_302_cov_58.367041_g48478_i0reverse_frame_3 - 0.089 12.9 1.6 0.12 12.5 1.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5326) Brr6_like_C_C PF10104.9 NODE_56415_length_302_cov_60.838951_g48477_i0reverse_frame_2 - 1.4 8.7 2.9 1.8 8.4 2.9 1.1 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain Ras PF00071.22 NODE_56414_length_302_cov_62.756554_g48476_i0forward_frame_2 - 3.9e-11 42.8 0.0 4.5e-11 42.6 0.0 1.0 1 0 0 1 1 1 1 Ras family Ku_PK_bind PF08785.11 NODE_56414_length_302_cov_62.756554_g48476_i0forward_frame_2 - 0.027 14.6 0.1 0.03 14.5 0.1 1.2 1 0 0 1 1 1 0 Ku C terminal domain like HAUS5 PF14817.6 NODE_56412_length_302_cov_65.722846_g48474_i0reverse_frame_2 - 0.053 12.3 1.6 0.051 12.3 1.6 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 5 DUF3618 PF12277.8 NODE_56412_length_302_cov_65.722846_g48474_i0reverse_frame_2 - 0.053 13.8 3.0 0.053 13.8 3.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3618) TSC22 PF01166.18 NODE_56412_length_302_cov_65.722846_g48474_i0reverse_frame_2 - 0.061 13.6 0.6 0.11 12.8 0.6 1.5 1 1 0 1 1 1 0 TSC-22/dip/bun family DUF4140 PF13600.6 NODE_56412_length_302_cov_65.722846_g48474_i0reverse_frame_2 - 0.069 13.6 1.9 0.1 13.1 1.9 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) BicD PF09730.9 NODE_56412_length_302_cov_65.722846_g48474_i0reverse_frame_2 - 0.12 10.8 1.5 0.13 10.7 1.5 1.0 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D DUF3072 PF11272.8 NODE_56412_length_302_cov_65.722846_g48474_i0reverse_frame_2 - 0.45 10.4 2.1 0.52 10.3 1.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3072) DUF1192 PF06698.11 NODE_56412_length_302_cov_65.722846_g48474_i0reverse_frame_2 - 0.52 10.4 7.4 8.4 6.5 7.4 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1192) DUF2457 PF10446.9 NODE_56409_length_302_cov_71.857678_g48471_i0reverse_frame_3 - 1.4 8.0 3.9 1.5 7.9 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF863 PF05904.11 NODE_56405_length_302_cov_84.767790_g48467_i0reverse_frame_3 - 0.045 12.2 1.1 0.052 12.0 1.1 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) ALG3 PF05208.13 NODE_56402_length_302_cov_91.220974_g48464_i0reverse_frame_3 - 2.7e-08 33.7 4.1 3.1e-08 33.5 4.1 1.0 1 0 0 1 1 1 1 ALG3 protein PIG-Y PF15159.6 NODE_56402_length_302_cov_91.220974_g48464_i0reverse_frame_3 - 0.89 10.5 7.5 1.7 9.6 7.5 1.6 1 1 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y Pallilysin PF18663.1 NODE_56401_length_302_cov_91.318352_g48463_i0forward_frame_2 - 0.0028 17.6 0.7 0.0035 17.3 0.7 1.1 1 0 0 1 1 1 1 Pallilysin beta barrel domain Sedlin_N PF04628.13 NODE_56400_length_302_cov_96.902622_g48462_i0reverse_frame_2 - 4.9e-08 33.2 0.0 5.5e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region TP2 PF01254.18 NODE_56399_length_302_cov_98.205993_g48461_i0forward_frame_3 - 1.3 9.7 18.2 1.4 9.5 18.2 1.0 1 0 0 1 1 1 0 Nuclear transition protein 2 Rrp44_S1 PF17215.3 NODE_56396_length_302_cov_104.659176_g48458_i0forward_frame_3 - 0.089 12.8 2.5 0.1 12.6 2.5 1.3 1 1 0 1 1 1 0 S1 domain DUF5556 PF17711.1 NODE_56394_length_302_cov_106.846442_g48456_i0forward_frame_2 - 0.061 13.2 1.0 0.078 12.9 1.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5556) Thioredoxin PF00085.20 NODE_56385_length_302_cov_396.288390_g48447_i0reverse_frame_3 - 0.09 12.8 0.3 0.14 12.2 0.3 1.3 1 0 0 1 1 1 0 Thioredoxin ERGIC_N PF13850.6 NODE_56381_length_303_cov_0.970149_g48443_i0reverse_frame_2 - 0.0097 16.2 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DuoxA PF10204.9 NODE_56380_length_303_cov_1.104478_g48442_i0reverse_frame_2 - 0.57 9.1 6.0 0.62 9.0 6.0 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor DUF3270 PF11674.8 NODE_56377_length_303_cov_1.335821_g48439_i0reverse_frame_3 - 0.00076 19.6 6.3 0.0014 18.8 6.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) Herpes_LMP1 PF05297.11 NODE_56377_length_303_cov_1.335821_g48439_i0reverse_frame_2 - 1.9 7.6 3.9 2.2 7.4 3.9 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) YjcQ PF09639.10 NODE_56377_length_303_cov_1.335821_g48439_i0forward_frame_2 - 0.015 15.5 0.4 0.02 15.1 0.4 1.2 1 0 0 1 1 1 0 YjcQ protein DUF1599 PF07659.11 NODE_56373_length_303_cov_1.440299_g48435_i0forward_frame_3 - 1.1 9.8 3.2 21 5.7 1.0 2.2 2 0 0 2 2 2 0 Nucleotide modification associated domain 1 Beta_helix PF13229.6 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_3 - 0.0021 17.9 1.0 0.0027 17.6 1.0 1.1 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_3 - 0.0022 17.3 0.3 0.0024 17.2 0.3 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Malate_synthase PF01274.22 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_3 - 0.082 11.1 0.0 0.09 11.0 0.0 1.0 1 0 0 1 1 1 0 Malate synthase Beta_helix PF13229.6 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_2 - 0.0011 18.8 0.2 0.0012 18.7 0.2 1.2 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_56370_length_303_cov_1.574627_g48432_i0reverse_frame_2 - 0.0013 18.1 0.2 0.0015 17.8 0.2 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Kinesin PF00225.23 NODE_56366_length_303_cov_1.634328_g48428_i0forward_frame_3 - 1.8e-22 79.7 0.0 2e-22 79.6 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain YWFCY PF14293.6 NODE_56364_length_303_cov_1.738806_g48426_i0forward_frame_2 - 0.0065 16.8 0.1 0.013 15.8 0.1 1.6 1 0 0 1 1 1 1 YWFCY protein Flexi_CP PF00286.20 NODE_56364_length_303_cov_1.738806_g48426_i0forward_frame_2 - 0.12 12.3 0.9 0.17 11.8 0.7 1.4 1 1 0 1 1 1 0 Viral coat protein Calcipressin PF04847.12 NODE_56363_length_303_cov_1.779851_g48425_i0reverse_frame_3 - 0.085 12.6 0.2 0.095 12.4 0.2 1.1 1 0 0 1 1 1 0 Calcipressin KH_2 PF07650.17 NODE_56362_length_303_cov_1.779851_g48424_i0forward_frame_2 - 0.067 13.0 0.0 0.093 12.6 0.0 1.3 1 0 0 1 1 1 0 KH domain DUF3917 PF13055.6 NODE_56359_length_303_cov_1.869403_g48421_i0forward_frame_2 - 0.084 13.3 0.8 0.11 12.9 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3917) DUF1473 PF07341.11 NODE_56359_length_303_cov_1.869403_g48421_i0forward_frame_2 - 0.11 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1473) Ndufs5 PF10200.9 NODE_56351_length_303_cov_2.052239_g48413_i0reverse_frame_2 - 0.055 13.7 1.4 5.3 7.4 0.1 2.1 1 1 0 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa Ras PF00071.22 NODE_56349_length_303_cov_2.108209_g48411_i0reverse_frame_3 - 1.3e-09 37.8 0.0 5.9e-06 26.0 0.0 2.1 1 1 1 2 2 2 2 Ras family Roc PF08477.13 NODE_56349_length_303_cov_2.108209_g48411_i0reverse_frame_3 - 4.9e-07 30.0 0.0 0.0003 21.0 0.0 2.1 1 1 1 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase Nucleoplasmin PF03066.15 NODE_56348_length_303_cov_2.115672_g48410_i0reverse_frame_3 - 0.086 13.3 0.4 0.11 13.0 0.4 1.3 1 1 0 1 1 1 0 Nucleoplasmin/nucleophosmin domain HTH_Tnp_4 PF13613.6 NODE_56348_length_303_cov_2.115672_g48410_i0forward_frame_3 - 0.12 12.2 0.3 1.7 8.5 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease DUF2614 PF11023.8 NODE_56346_length_303_cov_2.175373_g48408_i0reverse_frame_3 - 0.03 14.4 2.6 0.035 14.2 2.6 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Ribosomal_L7Ae PF01248.26 NODE_56346_length_303_cov_2.175373_g48408_i0forward_frame_3 - 0.074 12.8 0.1 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SMN PF06003.12 NODE_56345_length_303_cov_2.197761_g48407_i0forward_frame_3 - 8.9 5.5 7.4 1.1 8.5 1.0 1.9 1 1 0 2 2 2 0 Survival motor neuron protein (SMN) RCC1 PF00415.18 NODE_56343_length_303_cov_2.223881_g48405_i0reverse_frame_2 - 5.7e-11 42.9 0.4 0.0003 21.3 0.3 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_56343_length_303_cov_2.223881_g48405_i0reverse_frame_2 - 7.8e-08 31.9 1.3 1.1e-07 31.5 1.3 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Ank_2 PF12796.7 NODE_56340_length_303_cov_2.406716_g48402_i0reverse_frame_2 - 2.5e-15 56.8 1.2 2.8e-15 56.7 1.2 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_56340_length_303_cov_2.406716_g48402_i0reverse_frame_2 - 7.8e-14 51.8 2.7 1.3e-07 32.0 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_56340_length_303_cov_2.406716_g48402_i0reverse_frame_2 - 1.6e-11 44.1 5.2 0.00019 21.7 0.3 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 NODE_56340_length_303_cov_2.406716_g48402_i0reverse_frame_2 - 9.1e-11 41.0 6.1 0.00011 22.3 0.1 3.4 3 1 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 NODE_56340_length_303_cov_2.406716_g48402_i0reverse_frame_2 - 7.4e-10 38.9 0.3 7.4e-10 38.9 0.3 2.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) FtsK_SpoIIIE_N PF12538.8 NODE_56340_length_303_cov_2.406716_g48402_i0reverse_frame_2 - 0.052 13.7 0.1 0.062 13.5 0.1 1.1 1 0 0 1 1 1 0 DNA transporter WIF PF02019.18 NODE_56340_length_303_cov_2.406716_g48402_i0reverse_frame_2 - 0.074 12.8 0.1 0.099 12.3 0.1 1.2 1 0 0 1 1 1 0 WIF domain Spo7 PF03907.13 NODE_56338_length_303_cov_2.574627_g48400_i0forward_frame_3 - 0.94 8.9 4.9 0.98 8.9 4.9 1.1 1 0 0 1 1 1 0 Spo7-like protein PEP-utilizers PF00391.23 NODE_56337_length_303_cov_2.690299_g48399_i0forward_frame_3 - 3.1e-07 30.0 0.0 6e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PAD_M PF08527.10 NODE_56337_length_303_cov_2.690299_g48399_i0forward_frame_3 - 0.025 14.3 0.0 0.6 9.8 0.0 2.0 1 1 0 2 2 2 0 Protein-arginine deiminase (PAD) middle domain Post_transc_reg PF13797.6 NODE_56336_length_303_cov_2.832090_g48398_i0reverse_frame_3 - 0.06 13.2 0.1 0.61 10.0 0.1 2.0 1 1 1 2 2 2 0 Post-transcriptional regulator DUF4818 PF16089.5 NODE_56335_length_303_cov_2.854478_g48397_i0reverse_frame_3 - 0.025 15.0 1.5 0.86 10.1 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4818) DUF4773 PF15998.5 NODE_56334_length_303_cov_2.947761_g48396_i0forward_frame_3 - 0.00084 19.9 2.0 0.00086 19.8 2.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4773) IAT_beta PF11924.8 NODE_56333_length_303_cov_2.955224_g48395_i0reverse_frame_3 - 7.2e-45 153.5 0.9 7.7e-45 153.4 0.9 1.0 1 0 0 1 1 1 1 Inverse autotransporter, beta-domain DUF4133 PF13571.6 NODE_56329_length_303_cov_3.645522_g48391_i0forward_frame_3 - 0.15 12.4 0.6 0.37 11.2 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4133) Disintegrin PF00200.23 NODE_56327_length_303_cov_3.750000_g48389_i0forward_frame_3 - 0.0019 18.9 6.3 0.37 11.6 1.7 2.4 2 1 0 2 2 2 2 Disintegrin DUF2164 PF09932.9 NODE_56326_length_303_cov_3.917910_g48388_i0reverse_frame_3 - 0.033 14.3 0.0 0.045 13.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) Peptidase_S24 PF00717.23 NODE_56326_length_303_cov_3.917910_g48388_i0forward_frame_2 - 3.8e-15 55.6 0.0 6.8e-15 54.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase S24-like DUF2917 PF11142.8 NODE_56325_length_303_cov_4.235075_g48387_i0forward_frame_3 - 0.091 12.2 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2917) DiSB-ORF2_chro PF16506.5 NODE_56325_length_303_cov_4.235075_g48387_i0forward_frame_3 - 0.17 11.9 0.0 8.6 6.4 0.0 2.2 1 1 1 2 2 2 0 Putative virion glycoprotein of insect viruses DUF2722 PF10846.8 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_2 - 0.039 12.9 0.7 0.04 12.9 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) Spem1 PF15670.5 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_2 - 0.095 12.3 0.3 0.12 12.0 0.3 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 zf-met2 PF12907.7 NODE_56324_length_303_cov_4.600746_g48386_i0reverse_frame_2 - 0.13 12.4 0.2 0.25 11.5 0.0 1.5 2 0 0 2 2 2 0 Zinc-binding DUF1820 PF08850.11 NODE_56321_length_303_cov_11.201493_g48383_i0forward_frame_2 - 0.012 16.1 0.8 0.014 15.9 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1820) PET PF06297.14 NODE_56320_length_303_cov_15.813433_g48382_i0reverse_frame_2 - 0.043 14.1 0.8 0.052 13.9 0.8 1.2 1 0 0 1 1 1 0 PET Domain EIIBC-GUT_N PF03612.14 NODE_56320_length_303_cov_15.813433_g48382_i0reverse_frame_2 - 0.089 12.5 1.1 0.099 12.4 1.1 1.0 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Promethin PF16015.5 NODE_56315_length_303_cov_47.526119_g48377_i0forward_frame_3 - 4.3 7.3 18.1 6.1 6.8 18.1 1.3 1 0 0 1 1 1 0 Promethin TrkA_TMD PF18613.1 NODE_56313_length_303_cov_49.828358_g48375_i0reverse_frame_3 - 1.8 8.0 7.0 2.9 7.4 7.0 1.2 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain DAGK_prokar PF01219.19 NODE_56313_length_303_cov_49.828358_g48375_i0forward_frame_2 - 0.043 13.6 0.2 0.054 13.3 0.2 1.1 1 0 0 1 1 1 0 Prokaryotic diacylglycerol kinase SNARE PF05739.19 NODE_56313_length_303_cov_49.828358_g48375_i0forward_frame_2 - 0.081 12.9 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 SNARE domain PIF6 PF05341.11 NODE_56310_length_303_cov_56.145522_g48372_i0reverse_frame_2 - 0.072 13.2 0.1 0.086 13.0 0.1 1.2 1 0 0 1 1 1 0 Per os infectivity factor 6 IRF PF00605.17 NODE_56310_length_303_cov_56.145522_g48372_i0reverse_frame_2 - 0.2 11.9 5.5 0.24 11.7 5.5 1.1 1 0 0 1 1 1 0 Interferon regulatory factor transcription factor Connexin PF00029.19 NODE_56310_length_303_cov_56.145522_g48372_i0reverse_frame_2 - 0.22 11.3 1.9 0.25 11.1 1.9 1.1 1 0 0 1 1 1 0 Connexin zf-UBP_var PF17807.1 NODE_56310_length_303_cov_56.145522_g48372_i0forward_frame_2 - 0.019 14.7 2.9 0.032 14.0 2.9 1.4 1 0 0 1 1 1 0 Variant UBP zinc finger WD40 PF00400.32 NODE_56309_length_303_cov_58.313433_g48371_i0forward_frame_3 - 4e-11 43.3 0.3 4.5e-07 30.5 0.3 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_56309_length_303_cov_58.313433_g48371_i0forward_frame_3 - 2.9e-05 24.3 0.0 0.0046 17.2 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Filo_VP24 PF06389.11 NODE_56308_length_303_cov_58.391791_g48370_i0forward_frame_2 - 0.053 13.0 0.1 0.059 12.9 0.1 1.1 1 0 0 1 1 1 0 Filovirus membrane-associated protein VP24 DUF1980 PF09323.10 NODE_56306_length_303_cov_61.839552_g48368_i0reverse_frame_2 - 0.87 9.5 8.1 1.3 9.0 8.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) Erv26 PF04148.13 NODE_56306_length_303_cov_61.839552_g48368_i0forward_frame_3 - 0.16 11.8 4.1 0.11 12.3 1.5 1.7 1 1 1 2 2 2 0 Transmembrane adaptor Erv26 SelK_SelG PF10961.8 NODE_56305_length_303_cov_62.417910_g48367_i0reverse_frame_2 - 0.19 12.3 0.0 0.23 12.1 0.0 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG EI24 PF07264.11 NODE_56305_length_303_cov_62.417910_g48367_i0forward_frame_3 - 0.067 13.4 5.4 0.074 13.3 5.4 1.0 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) Piezo_RRas_bdg PF12166.8 NODE_56305_length_303_cov_62.417910_g48367_i0forward_frame_3 - 0.074 12.3 1.8 0.068 12.4 1.8 1.2 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain TruB_C_2 PF16198.5 NODE_56304_length_303_cov_62.514925_g48366_i0forward_frame_3 - 3.3e-11 43.1 0.1 5.2e-11 42.5 0.1 1.3 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain DUF3150 PF11348.8 NODE_56303_length_303_cov_63.660448_g48365_i0reverse_frame_2 - 0.0006 19.1 0.5 0.00074 18.8 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3150) DUF2713 PF10897.8 NODE_56302_length_303_cov_63.940299_g48364_i0reverse_frame_3 - 0.0049 16.5 0.0 0.0057 16.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2713) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks266.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks266.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks266.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks266.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Fer4_4 PF12800.7 NODE_56301_length_303_cov_64.820896_g48363_i0forward_frame_2 - 2.6 8.7 10.6 8.7e+02 0.9 10.5 2.6 1 1 0 1 1 1 0 4Fe-4S binding domain Kinesin PF00225.23 NODE_56297_length_303_cov_68.593284_g48359_i0forward_frame_2 - 1.7e-08 33.8 0.1 1.5e-07 30.7 0.2 1.8 1 1 1 2 2 2 2 Kinesin motor domain DASH_Dad4 PF08650.10 NODE_56290_length_303_cov_80.604478_g48352_i0forward_frame_3 - 0.11 12.5 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 DASH complex subunit Dad4 DUF3601 PF12208.8 NODE_56290_length_303_cov_80.604478_g48352_i0forward_frame_2 - 0.13 12.3 0.1 0.28 11.3 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3601) SipA_VBS PF17985.1 NODE_56290_length_303_cov_80.604478_g48352_i0forward_frame_2 - 1.9 8.6 4.8 0.78 9.8 1.2 2.1 2 0 0 2 2 2 0 SipA vinculin binding site BolA PF01722.18 NODE_56289_length_303_cov_83.324627_g48351_i0forward_frame_2 - 0.0015 18.8 0.0 0.0025 18.1 0.0 1.3 1 0 0 1 1 1 1 BolA-like protein ETRAMP PF09716.10 NODE_56289_length_303_cov_83.324627_g48351_i0forward_frame_2 - 0.17 11.9 2.1 0.31 11.1 2.1 1.4 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) FTSW_RODA_SPOVE PF01098.19 NODE_56285_length_303_cov_91.085821_g48347_i0reverse_frame_3 - 0.12 11.4 0.2 0.15 11.0 0.2 1.0 1 0 0 1 1 1 0 Cell cycle protein DUF4096 PF13340.6 NODE_56282_length_303_cov_98.380597_g48344_i0reverse_frame_3 - 0.0078 16.4 0.0 0.012 15.8 0.0 1.3 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) zf-Sec23_Sec24 PF04810.15 NODE_56282_length_303_cov_98.380597_g48344_i0reverse_frame_2 - 0.015 15.3 0.2 0.025 14.6 0.2 1.3 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger LIME1 PF15332.6 NODE_56281_length_303_cov_101.944030_g48343_i0reverse_frame_3 - 0.14 11.7 0.1 0.21 11.2 0.1 1.3 1 1 0 1 1 1 0 Lck-interacting transmembrane adapter 1 DUF229 PF02995.17 NODE_56281_length_303_cov_101.944030_g48343_i0reverse_frame_2 - 3.1e-07 29.4 0.9 3.4e-07 29.2 0.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Amino_oxidase PF01593.24 NODE_56281_length_303_cov_101.944030_g48343_i0reverse_frame_2 - 0.14 11.5 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase DUF5331 PF17265.2 NODE_56279_length_303_cov_110.283582_g48341_i0reverse_frame_2 - 0.13 12.0 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5331) DarT PF14487.6 NODE_56278_length_303_cov_112.858209_g48340_i0reverse_frame_3 - 0.084 12.7 0.0 0.094 12.6 0.0 1.1 1 0 0 1 1 1 0 ssDNA thymidine ADP-ribosyltransferase, DarT Peptidase_Prp PF04327.12 NODE_56275_length_303_cov_138.305970_g48337_i0reverse_frame_3 - 0.00044 20.4 0.0 0.00051 20.2 0.0 1.1 1 0 0 1 1 1 1 Cysteine protease Prp Pyr_redox_dim PF02852.22 NODE_56273_length_303_cov_188.917910_g48335_i0reverse_frame_2 - 0.079 13.2 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CytB6-F_Fe-S PF08802.10 NODE_56273_length_303_cov_188.917910_g48335_i0reverse_frame_2 - 0.26 11.3 4.4 0.96 9.5 0.1 2.2 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit EB PF01683.18 NODE_56273_length_303_cov_188.917910_g48335_i0forward_frame_3 - 0.00097 19.4 5.8 0.00097 19.4 5.8 1.6 2 0 0 2 2 2 1 EB module MLANA PF14991.6 NODE_56272_length_303_cov_251.798507_g44443_i1forward_frame_2 - 0.33 11.2 1.1 0.51 10.6 1.1 1.3 1 0 0 1 1 1 0 Protein melan-A Orf78 PF06024.12 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.00043 20.5 0.1 0.00049 20.4 0.1 1.2 1 0 0 1 1 1 1 Orf78 (ac78) DUF2207 PF09972.9 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.00065 18.6 0.0 0.00065 18.6 0.0 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF5383 PF17355.2 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.0021 18.4 0.1 0.0027 18.1 0.1 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5383) 7TM_GPCR_Srh PF10318.9 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.0055 15.8 0.2 0.0065 15.5 0.2 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srh SARAF PF06682.12 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.0069 16.1 0.1 0.0073 16.0 0.1 1.0 1 0 0 1 1 1 1 SOCE-associated regulatory factor of calcium homoeostasis TMEM154 PF15102.6 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.0086 16.0 0.1 0.01 15.8 0.1 1.2 1 0 0 1 1 1 1 TMEM154 protein family Synaptobrevin PF00957.21 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.016 15.0 0.0 0.022 14.6 0.0 1.2 1 0 0 1 1 1 0 Synaptobrevin DUF2417 PF10329.9 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.023 14.1 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Holin_BhlA PF10960.8 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.028 14.4 1.2 0.045 13.7 0.6 1.7 1 1 0 1 1 1 0 BhlA holin family COX2_TM PF02790.15 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.038 14.1 0.0 0.049 13.8 0.0 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain Phospholamban PF04272.14 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.04 13.4 1.4 0.066 12.7 0.9 1.6 2 0 0 2 2 2 0 Phospholamban TRP PF06011.12 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.059 12.1 0.5 0.081 11.6 0.5 1.2 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel PspB PF06667.12 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.17 12.0 0.1 0.32 11.1 0.1 1.4 1 0 0 1 1 1 0 Phage shock protein B ATP-synt_8 PF00895.20 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.46 11.0 4.6 0.25 11.9 2.4 1.7 1 1 1 2 2 2 0 ATP synthase protein 8 Sigma_reg_N PF13800.6 NODE_56269_length_303_cov_349.126866_g48332_i0reverse_frame_3 - 0.51 10.7 6.2 0.34 11.2 3.4 1.9 1 1 1 2 2 2 0 Sigma factor regulator N-terminal Tsg PF04668.12 ORF9968 - 0.00099 19.8 0.4 0.0014 19.3 0.4 1.3 1 0 0 1 1 1 1 Twisted gastrulation (Tsg) protein conserved region PRR20 PF15708.5 ORF97247 - 0.15 12.0 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Proline-rich protein family 20 SNARE PF05739.19 ORF96692 - 2.5e-06 27.4 0.1 2.5e-06 27.4 0.1 1.8 2 0 0 2 2 2 1 SNARE domain Use1 PF09753.9 ORF96692 - 0.00013 21.8 2.0 0.00015 21.5 2.0 1.0 1 0 0 1 1 1 1 Membrane fusion protein Use1 Prominin PF05478.11 ORF96692 - 0.0067 14.5 0.3 0.0074 14.3 0.3 1.0 1 0 0 1 1 1 1 Prominin ERGIC_N PF13850.6 ORF96692 - 0.012 15.9 0.9 0.012 15.9 0.9 1.6 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF16 PF01519.16 ORF96692 - 0.013 16.0 4.2 0.017 15.6 4.2 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 COG5 PF10392.9 ORF96692 - 0.029 14.5 0.3 0.032 14.4 0.3 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 SMC_Nse1 PF07574.13 ORF96692 - 0.034 14.0 0.2 0.041 13.8 0.2 1.1 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex RmuC PF02646.16 ORF96692 - 0.049 12.7 0.9 0.054 12.6 0.9 1.0 1 0 0 1 1 1 0 RmuC family Tex_N PF09371.10 ORF96692 - 0.12 12.0 0.9 0.15 11.7 0.9 1.1 1 0 0 1 1 1 0 Tex-like protein N-terminal domain Pex24p PF06398.11 ORF96692 - 0.15 11.0 0.3 0.16 10.9 0.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2835 PF11197.8 ORF96303 - 0.14 12.0 0.1 0.2 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2835) KIAA1430 PF13879.6 ORF95991 - 9e-17 61.7 3.4 1e-16 61.6 3.4 1.0 1 0 0 1 1 1 1 KIAA1430 homologue IKKbetaNEMObind PF12179.8 ORF95991 - 0.02 14.9 0.0 9 6.4 0.0 2.4 2 0 0 2 2 2 0 I-kappa-kinase-beta NEMO binding domain TrpP PF17099.5 ORF95705 - 0.52 10.1 6.1 0.58 9.9 6.1 1.0 1 0 0 1 1 1 0 Tryptophan transporter TrpP CitX PF03802.14 ORF92958 - 0.12 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CdiI_2 PF18593.1 ORF89434 - 0.012 16.3 0.0 0.022 15.4 0.0 1.4 1 0 0 1 1 1 0 CdiI immunity protein zf-C4_Topoisom PF01396.19 ORF89267 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Oxidored_q2 PF00420.24 ORF86998 - 0.0088 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PhyH PF05721.13 ORF8652 - 0.058 13.6 0.0 0.081 13.2 0.0 1.3 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) R-HINP1I PF11463.8 ORF86237 - 0.024 14.1 0.3 0.028 13.8 0.3 1.0 1 0 0 1 1 1 0 R.HinP1I restriction endonuclease Bac_export_2 PF01312.19 ORF85762 - 9.7e-25 87.5 1.0 1.1e-24 87.2 1.0 1.1 1 0 0 1 1 1 1 FlhB HrpN YscU SpaS Family DUF2798 PF11391.8 ORF8563 - 0.0081 16.2 1.2 0.013 15.5 1.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2798) Ldi PF18566.1 ORF8563 - 0.04 13.4 0.2 0.042 13.3 0.2 1.0 1 0 0 1 1 1 0 Linalool dehydratase/isomerase LPD15 PF18828.1 ORF8500 - 0.025 14.5 0.8 0.031 14.2 0.8 1.2 1 0 0 1 1 1 0 Large polyvalent-protein-associated domain 15 DUF2852 PF11014.8 ORF84868 - 0.51 10.5 3.5 0.65 10.2 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) TraG_N PF07916.11 ORF8463 - 0.031 13.1 0.9 0.036 12.9 0.9 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region REV PF00424.18 ORF84366 - 0.0078 16.2 0.1 0.009 16.0 0.1 1.2 1 0 0 1 1 1 1 REV protein (anti-repression trans-activator protein) PapC_N PF13954.6 ORF8434 - 0.036 14.1 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 PapC N-terminal domain TBPIP PF07106.13 ORF83453 - 0.14 12.1 0.1 0.19 11.7 0.1 1.2 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain DUF3481 PF11980.8 ORF82589 - 0.02 14.6 0.1 0.029 14.1 0.1 1.2 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein CinA PF02464.17 ORF81581 - 6.3e-29 100.5 0.1 6.9e-29 100.4 0.1 1.0 1 0 0 1 1 1 1 Competence-damaged protein Oxidored_q2 PF00420.24 ORF79996 - 0.0088 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Pep3_Vps18 PF05131.14 ORF77866 - 0.055 13.3 0.5 0.12 12.2 0.4 1.6 1 1 1 2 2 2 0 Pep3/Vps18/deep orange family ISET-FN3_linker PF16625.5 ORF77509 - 0.95 10.0 8.9 0.42 11.2 5.7 2.0 1 1 1 2 2 2 0 Unstructured linking region I-set and fnIII on Brother of CDO Fijivirus_P9-2 PF06837.11 ORF76254 - 5 6.5 8.5 5.2 6.5 8.5 1.2 1 0 0 1 1 1 0 Fijivirus P9-2 protein TrpP PF17099.5 ORF75978 - 0.52 10.1 6.1 0.58 9.9 6.1 1.0 1 0 0 1 1 1 0 Tryptophan transporter TrpP C1_2 PF03107.16 ORF75406 - 0.0065 16.8 2.0 0.01 16.1 2.0 1.4 1 0 0 1 1 1 1 C1 domain Bd3614_N PF14442.6 ORF74987 - 0.011 16.0 1.6 0.018 15.4 1.6 1.3 1 0 0 1 1 1 0 Bd3614-like deaminase N-terminal Succ_CoA_lig PF13607.6 ORF74499 - 0.16 11.7 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain Ubiq_cyt_C_chap PF03981.12 ORF73130 - 0.00061 19.9 0.0 0.0008 19.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquinol-cytochrome C chaperone FTA4 PF13093.6 ORF70830 - 0.032 14.1 0.1 0.038 13.9 0.1 1.2 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 CsgA PF17334.2 ORF69474 - 0.054 14.2 0.3 0.093 13.5 0.2 1.5 1 1 0 1 1 1 0 Minor curli fiber component A Lyase_8_C PF02884.17 ORF69208 - 0.16 12.4 0.3 0.82 10.2 0.1 1.9 1 1 1 2 2 2 0 Polysaccharide lyase family 8, C-terminal beta-sandwich domain YitT_membrane PF02588.15 ORF6910 - 0.28 10.5 3.2 0.32 10.3 3.2 1.1 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 zf-C4_Topoisom PF01396.19 ORF68585 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger VATC PF18716.1 ORF68213 - 0.045 13.6 1.4 0.097 12.5 1.4 1.6 1 0 0 1 1 1 0 Vms1-associating treble clef domain CdiA_C_tRNase PF18664.1 ORF65864 - 0.059 13.6 0.0 0.068 13.4 0.0 1.1 1 0 0 1 1 1 0 CdiA C-terminal tRNase domain TrmE_N PF10396.9 ORF64794 - 0.14 12.5 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 GTP-binding protein TrmE N-terminus DUF3783 PF12646.7 ORF64354 - 0.0029 17.5 0.2 0.0029 17.5 0.2 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF3783) TMEM71 PF15121.6 ORF63933 - 0.17 11.5 0.2 0.25 11.0 0.2 1.2 1 0 0 1 1 1 0 TMEM71 protein family Zf_RING PF16744.5 ORF63770 - 0.097 12.8 0.5 0.16 12.1 0.2 1.5 2 0 0 2 2 2 0 KIAA1045 RING finger Fijivirus_P9-2 PF06837.11 ORF61438 - 5 6.5 8.5 5.2 6.5 8.5 1.2 1 0 0 1 1 1 0 Fijivirus P9-2 protein NCD3G PF07562.14 ORF60791 - 0.0083 16.1 2.0 0.0083 16.1 2.0 2.0 2 0 0 2 2 2 1 Nine Cysteines Domain of family 3 GPCR DUF3438 PF11920.8 ORF60581 - 0.14 11.4 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) DUF4131 PF13567.6 ORF60274 - 0.072 12.7 0.0 0.083 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) KKLCAg1 PF15204.6 ORF60123 - 0.017 15.2 0.0 1.7 8.8 0.0 2.1 2 0 0 2 2 2 0 Kita-kyushu lung cancer antigen 1 DUF4088 PF13317.6 ORF60123 - 0.16 11.5 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4088) Acyl_transf_3 PF01757.22 ORF59541 - 0.00018 20.7 0.2 0.00023 20.4 0.2 1.1 1 0 0 1 1 1 1 Acyltransferase family NnrU PF07298.11 ORF59541 - 0.031 13.8 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 NnrU protein zf-C4_Topoisom PF01396.19 ORF58751 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger RICTOR_V PF14668.6 ORF58493 - 0.047 13.9 1.1 0.066 13.5 1.1 1.5 1 1 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, domain 5 PRA1 PF03208.19 ORF57787 - 0.021 14.4 3.3 0.026 14.1 3.3 1.2 1 0 0 1 1 1 0 PRA1 family protein CsgA PF17334.2 ORF57500 - 0.054 14.2 0.3 0.093 13.5 0.2 1.5 1 1 0 1 1 1 0 Minor curli fiber component A YBD PF17725.1 ORF57402 - 0.099 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 YAP binding domain CAS_CSE1 PF03378.15 ORF57184 - 0.27 9.7 0.2 1.2 7.5 0.0 1.8 2 0 0 2 2 2 0 CAS/CSE protein, C-terminus DUF573 PF04504.14 ORF56308 - 0.069 13.8 0.0 4.8 7.9 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function, DUF573 DUF3481 PF11980.8 ORF55907 - 0.02 14.6 0.1 0.029 14.1 0.1 1.2 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein YacG PF03884.14 ORF55826 - 0.21 11.3 3.3 0.24 11.2 1.0 1.9 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG MPDZ_u10 PF16667.5 ORF55511 - 0.073 14.0 1.4 0.073 14.0 1.4 1.7 1 1 0 1 1 1 0 Unstructured region 10 on multiple PDZ protein SporV_AA PF12164.8 ORF54604 - 0.021 15.2 2.0 0.025 14.9 2.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AA DivIVA PF05103.13 ORF54604 - 0.062 13.4 4.7 0.39 10.8 4.7 2.0 1 1 0 1 1 1 0 DivIVA protein BRE1 PF08647.11 ORF54604 - 0.083 13.0 6.2 0.16 12.0 5.8 1.6 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase LPP PF04728.13 ORF54604 - 0.11 12.9 2.3 1.4 9.3 0.5 2.4 2 1 1 3 3 3 0 Lipoprotein leucine-zipper SecA_DEAD PF07517.14 ORF54604 - 0.18 11.1 2.7 0.2 10.9 2.3 1.3 1 1 0 1 1 1 0 SecA DEAD-like domain DivIC PF04977.15 ORF54604 - 0.9 9.4 5.8 1.3 8.9 0.3 2.2 1 1 1 2 2 2 0 Septum formation initiator IFP_35_N PF07334.13 ORF54604 - 1.2 9.3 6.5 3.4 7.8 0.3 2.2 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus LapA_dom PF06305.11 ORF54604 - 2.3 8.1 5.1 18 5.2 0.4 2.3 1 1 1 2 2 2 0 Lipopolysaccharide assembly protein A domain NHL PF01436.21 ORF54179 - 0.019 15.0 0.0 0.044 13.8 0.0 1.7 1 0 0 1 1 1 0 NHL repeat YBD PF17725.1 ORF53889 - 0.13 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 YAP binding domain DUF2655 PF10848.8 ORF53863 - 0.034 14.5 1.1 0.042 14.2 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2655) DUF4231 PF14015.6 ORF53741 - 0.17 12.4 2.5 0.22 12.0 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) DPM3 PF08285.11 ORF53576 - 0.31 11.3 2.7 0.66 10.2 0.5 2.0 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF5409 PF17421.2 ORF53334 - 0.069 13.9 1.6 0.089 13.5 1.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Fer4 PF00037.27 ORF52144 - 0.33 10.8 1.9 9.4 6.2 0.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain ATP-synt_F6 PF05511.11 ORF50932 - 0.064 13.7 0.1 0.071 13.5 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase coupling factor 6 DUF1315 PF07023.12 ORF50671 - 0.12 12.5 0.1 0.21 11.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1315) LEAP-2 PF07359.11 ORF47964 - 0.017 14.9 2.3 0.03 14.2 2.3 1.5 1 1 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Neprosin_AP PF14365.6 ORF47459 - 0.013 16.0 0.2 0.013 15.9 0.2 1.2 1 0 0 1 1 1 0 Neprosin activation peptide Disintegrin PF00200.23 ORF46773 - 4.4 8.2 14.4 12 6.8 14.4 1.8 1 1 0 1 1 1 0 Disintegrin GATA PF00320.27 ORF46739 - 0.0063 16.1 1.3 0.0063 16.1 1.3 2.1 2 0 0 2 2 2 1 GATA zinc finger DUF4884 PF16225.5 ORF46235 - 0.07 13.2 0.2 1.9 8.6 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4884) Solute_trans_a PF03619.16 ORF46115 - 0.0093 15.5 0.1 0.0093 15.5 0.1 1.0 1 0 0 1 1 1 1 Organic solute transporter Ostalpha Toxin_7 PF05980.12 ORF45605 - 2.7 8.3 13.2 1.7 9.0 9.7 2.4 2 1 0 2 2 2 0 Toxin 7 TOBE PF03459.17 ORF44542 - 0.12 12.7 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 TOBE domain SieB PF14163.6 ORF43609 - 0.0046 16.5 0.6 0.0067 15.9 0.4 1.3 1 1 0 1 1 1 1 Super-infection exclusion protein B Ribosomal_L23 PF00276.20 ORF43200 - 4.6e-31 107.0 4.3 5.3e-31 106.8 4.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L23 ubiquitin PF00240.23 ORF43200 - 0.0023 17.6 0.2 0.0034 17.1 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin family WHEP-TRS PF00458.20 ORF43200 - 0.05 13.8 1.9 0.13 12.5 1.9 1.7 1 0 0 1 1 1 0 WHEP-TRS domain P16-Arc PF04699.14 ORF43200 - 0.065 13.7 0.5 0.08 13.4 0.5 1.1 1 0 0 1 1 1 0 ARP2/3 complex 16 kDa subunit (p16-Arc) DnaJ PF00226.31 ORF43200 - 0.15 12.2 0.3 0.34 11.1 0.1 1.7 2 0 0 2 2 2 0 DnaJ domain DUF5465 PF17553.2 ORF43198 - 3.1 8.6 5.0 4.1 8.2 0.9 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5465) MerR PF00376.23 ORF42320 - 0.049 13.4 0.7 0.082 12.7 0.7 1.3 1 0 0 1 1 1 0 MerR family regulatory protein DUF5559 PF17714.1 ORF42274 - 0.16 11.8 7.7 0.19 11.6 7.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5559) EURL PF06937.11 ORF41717 - 0.00058 19.4 0.3 0.00064 19.2 0.3 1.0 1 0 0 1 1 1 1 EURL protein RHD_dimer PF16179.5 ORF40116 - 0.041 13.9 0.0 0.054 13.5 0.0 1.1 1 0 0 1 1 1 0 Rel homology dimerisation domain Taxilin PF09728.9 ORF39947 - 0.0021 17.3 9.2 0.0026 17.0 9.2 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein CHDCT2 PF08074.11 ORF39947 - 0.0094 16.1 0.8 0.011 16.0 0.8 1.1 1 0 0 1 1 1 1 CHDCT2 (NUC038) domain HemX PF04375.14 ORF39947 - 0.01 15.2 1.9 0.012 15.0 1.9 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase CENP-H PF05837.12 ORF39947 - 0.015 15.7 5.4 0.018 15.5 5.4 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) L27_1 PF09058.10 ORF39947 - 0.021 14.8 4.2 0.16 12.0 4.2 2.2 1 1 0 1 1 1 0 L27_1 DUF445 PF04286.12 ORF39947 - 0.037 13.8 2.6 0.04 13.7 2.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF445) DUF5082 PF16888.5 ORF39947 - 0.12 12.7 6.3 1.8 8.9 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) APOBEC4 PF18775.1 ORF39947 - 0.2 11.9 0.8 0.66 10.2 0.2 2.0 1 1 1 2 2 2 0 APOBEC4 FapA PF03961.13 ORF39947 - 0.3 9.7 5.8 0.33 9.5 5.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A TMPIT PF07851.13 ORF39947 - 0.35 10.1 4.5 0.36 10.0 4.5 1.0 1 0 0 1 1 1 0 TMPIT-like protein COX16 PF14138.6 ORF39947 - 0.65 10.5 4.7 0.78 10.3 4.7 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 PhoU PF01895.19 ORF39947 - 0.96 10.0 7.8 6 7.4 1.6 2.1 1 1 1 2 2 2 0 PhoU domain DUF4140 PF13600.6 ORF39947 - 2.7 8.5 6.5 7.9 7.0 0.7 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) FAP206 PF12018.8 ORF39277 - 0.031 13.8 0.2 0.036 13.6 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function PAXNEB PF05625.11 ORF39277 - 0.062 12.4 0.9 0.065 12.4 0.9 1.0 1 0 0 1 1 1 0 PAXNEB protein Fer4_6 PF12837.7 ORF39277 - 0.084 13.0 0.9 0.084 13.0 0.9 1.8 2 0 0 2 2 2 0 4Fe-4S binding domain TetR_C_19 PF17924.1 ORF38572 - 0.22 12.1 7.5 0.84 10.2 7.2 1.9 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain GED PF02212.18 ORF37837 - 2.4e-16 59.7 0.8 3.2e-16 59.3 0.8 1.2 1 0 0 1 1 1 1 Dynamin GTPase effector domain ZFYVE21_C PF16696.5 ORF37837 - 0.063 13.1 0.1 0.081 12.8 0.1 1.2 1 0 0 1 1 1 0 Zinc finger FYVE domain-containing protein 21 C-terminus Dicty_REP PF05086.12 ORF37351 - 0.33 8.9 1.2 0.32 8.9 1.2 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein SSP160 PF06933.11 ORF37351 - 3.9 5.5 11.7 6 4.9 11.7 1.3 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF2306 PF10067.9 ORF36497 - 0.0028 17.9 0.4 0.0035 17.6 0.4 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2306) Thioredoxin_16 PF18569.1 ORF35202 - 1.6 8.9 5.8 5.1 7.3 0.1 2.1 1 1 1 2 2 2 0 Thioredoxin-like domain Spec3 PF15795.5 ORF35069 - 7.9e-12 45.6 15.8 5.9e-10 39.6 15.8 2.1 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein Acyl_transf_3 PF01757.22 ORF35069 - 0.0056 15.8 0.1 0.006 15.7 0.1 1.0 1 0 0 1 1 1 1 Acyltransferase family DUF624 PF04854.14 ORF35069 - 0.24 11.5 4.1 0.4 10.8 4.1 1.3 1 1 0 1 1 1 0 Protein of unknown function, DUF624 TM2 PF05154.16 ORF35069 - 1.3 9.4 7.8 3.2 8.1 7.1 1.8 2 0 0 2 2 2 0 TM2 domain Period_C PF12114.8 ORF3482 - 0.12 12.0 0.2 0.14 11.7 0.2 1.1 1 0 0 1 1 1 0 Period protein 2/3C-terminal region SCP1201-deam PF14428.6 ORF34750 - 0.044 13.6 0.6 0.053 13.4 0.6 1.1 1 0 0 1 1 1 0 SCP1.201-like deaminase Peptidase_S55 PF05580.12 ORF34750 - 0.31 11.0 4.4 0.33 10.9 4.4 1.0 1 0 0 1 1 1 0 SpoIVB peptidase S55 LMBR1 PF04791.16 ORF34750 - 4.2 6.2 5.6 4.1 6.2 5.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein zf-C4_Topoisom PF01396.19 ORF34490 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Ydc2-catalyt PF09159.10 ORF33685 - 0.14 11.9 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 SNARE PF05739.19 ORF3254 - 2.5e-06 27.4 0.1 2.5e-06 27.4 0.1 1.7 2 0 0 2 2 2 1 SNARE domain Use1 PF09753.9 ORF3254 - 0.00018 21.3 2.0 0.00022 21.0 2.0 1.0 1 0 0 1 1 1 1 Membrane fusion protein Use1 Prominin PF05478.11 ORF3254 - 0.0074 14.3 0.3 0.0081 14.2 0.3 1.0 1 0 0 1 1 1 1 Prominin ERGIC_N PF13850.6 ORF3254 - 0.012 15.9 0.9 0.012 15.9 0.9 1.6 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF16 PF01519.16 ORF3254 - 0.02 15.4 4.1 0.027 14.9 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 COG5 PF10392.9 ORF3254 - 0.037 14.2 0.3 0.04 14.1 0.3 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 RmuC PF02646.16 ORF3254 - 0.07 12.2 0.9 0.077 12.1 0.9 1.0 1 0 0 1 1 1 0 RmuC family Defensin_beta PF00711.19 ORF32380 - 0.008 16.2 4.2 0.013 15.5 2.8 2.2 2 0 0 2 2 2 1 Beta defensin DUF2961 PF11175.8 ORF319 - 0.1 12.2 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2961) SporV_AA PF12164.8 ORF31499 - 0.021 15.2 2.0 0.025 14.9 2.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein AA DivIVA PF05103.13 ORF31499 - 0.062 13.4 4.7 0.39 10.8 4.7 2.0 1 1 0 1 1 1 0 DivIVA protein BRE1 PF08647.11 ORF31499 - 0.083 13.0 6.2 0.16 12.0 5.8 1.6 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase LPP PF04728.13 ORF31499 - 0.11 12.9 2.3 1.4 9.3 0.5 2.4 2 1 1 3 3 3 0 Lipoprotein leucine-zipper SecA_DEAD PF07517.14 ORF31499 - 0.18 11.1 2.7 0.2 10.9 2.3 1.3 1 1 0 1 1 1 0 SecA DEAD-like domain DivIC PF04977.15 ORF31499 - 0.9 9.4 5.8 1.3 8.9 0.3 2.2 1 1 1 2 2 2 0 Septum formation initiator IFP_35_N PF07334.13 ORF31499 - 1.2 9.3 6.5 3.4 7.8 0.3 2.2 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus LapA_dom PF06305.11 ORF31499 - 2.3 8.1 5.1 18 5.2 0.4 2.3 1 1 1 2 2 2 0 Lipopolysaccharide assembly protein A domain oligo_HPY PF08352.12 ORF30563 - 1.7e-09 38.1 0.0 2.1e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region RsfS PF02410.15 ORF28851 - 0.059 13.8 0.0 0.074 13.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal silencing factor during starvation EF-hand_6 PF13405.6 ORF28627 - 5.4e-09 35.3 1.0 0.00078 19.2 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF28627 - 2.8e-07 29.6 0.2 0.034 13.7 0.0 2.8 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF28627 - 5.4e-06 26.8 1.8 0.00012 22.4 0.7 2.7 2 1 0 2 2 2 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF28627 - 0.0063 16.8 0.0 0.01 16.2 0.0 1.3 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_5 PF13202.6 ORF28627 - 0.016 14.7 0.3 1.9 8.1 0.1 3.1 3 0 0 3 3 3 0 EF hand EF-hand_8 PF13833.6 ORF28627 - 0.068 13.0 1.3 5.3 7.0 0.0 2.7 2 1 1 3 3 3 0 EF-hand domain pair Rio2_N PF09202.11 ORF28126 - 0.069 13.4 0.0 0.093 13.0 0.0 1.2 1 0 0 1 1 1 0 Rio2, N-terminal DUF2619 PF10942.8 ORF27530 - 0.058 13.5 0.0 0.081 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2619) zf-RING_11 PF17123.5 ORF27530 - 0.095 12.5 2.0 0.17 11.7 2.0 1.5 1 0 0 1 1 1 0 RING-like zinc finger zf-C4_Topoisom PF01396.19 ORF27356 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger DbpA PF03880.15 ORF26662 - 0.046 13.7 0.0 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 DbpA RNA binding domain Ank_2 PF12796.7 ORF26362 - 4.3e-09 36.8 0.0 6.7e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF26362 - 9.4e-09 35.3 0.0 6.6e-06 26.3 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 ORF26362 - 1e-07 31.6 0.0 0.00032 20.9 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF26362 - 2.3e-07 30.9 0.0 3.6e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF26362 - 6.2e-07 29.9 0.0 1.7e-05 25.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Thioredoxin_16 PF18569.1 ORF26173 - 1.6 8.9 5.8 5.1 7.3 0.1 2.1 1 1 1 2 2 2 0 Thioredoxin-like domain Ribosomal_L7Ae PF01248.26 ORF26029 - 2.2e-08 33.7 0.0 3.5e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family MLTR_LBD PF17765.1 ORF25818 - 0.13 12.4 2.2 0.18 11.9 2.2 1.2 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain DUF1516 PF07457.11 ORF24633 - 0.0046 17.1 1.9 0.0075 16.5 1.9 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1516) NADHdh PF00146.21 ORF24633 - 0.0073 15.7 6.5 0.0088 15.4 6.5 1.1 1 0 0 1 1 1 1 NADH dehydrogenase 7TM_GPCR_Srh PF10318.9 ORF24633 - 0.073 12.1 2.0 0.079 12.0 2.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh Fumarate_red_D PF02313.17 ORF24633 - 0.34 11.0 8.7 0.57 10.3 6.8 2.2 1 1 1 2 2 2 0 Fumarate reductase subunit D SUR7 PF06687.12 ORF24633 - 0.55 9.8 7.0 0.63 9.6 7.0 1.1 1 0 0 1 1 1 0 SUR7/PalI family PapC_N PF13954.6 ORF24312 - 0.036 14.1 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 PapC N-terminal domain DUF3481 PF11980.8 ORF24090 - 0.02 14.6 0.1 0.029 14.1 0.1 1.2 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein Prophage_tail PF06605.11 ORF23358 - 0.095 11.9 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 Prophage endopeptidase tail TIG_plexin PF17960.1 ORF22359 - 0.11 12.5 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 TIG domain SfsA_N PF17746.1 ORF22359 - 0.16 12.1 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 SfsA N-terminal OB domain Env-gp36 PF09590.10 ORF21894 - 0.044 12.2 0.1 0.047 12.1 0.1 1.2 1 0 0 1 1 1 0 Lentivirus surface glycoprotein DUF2256 PF10013.9 ORF21894 - 0.1 12.8 0.1 0.2 11.8 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF2835 PF11197.8 ORF20531 - 0.14 12.0 0.1 0.2 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2835) DUF3685 PF12452.8 ORF1966 - 0.047 13.4 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) Sarcoglycan_2 PF05510.13 ORF19589 - 0.16 10.7 0.0 0.18 10.6 0.0 1.0 1 0 0 1 1 1 0 Sarcoglycan alpha/epsilon Erf4 PF10256.9 ORF19575 - 0.0055 16.8 0.1 0.0063 16.6 0.1 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family PRK PF00485.18 ORF19383 - 0.00033 20.5 0.1 0.00034 20.4 0.1 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family Syntaxin PF00804.25 ORF19383 - 0.0029 17.3 6.2 0.0035 17.0 5.0 1.6 1 1 1 2 2 2 2 Syntaxin DUF1759 PF03564.15 ORF19383 - 0.0093 15.9 0.6 0.012 15.5 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) Nup84_Nup100 PF04121.13 ORF19383 - 0.023 12.8 3.8 0.026 12.6 3.8 1.0 1 0 0 1 1 1 0 Nuclear pore protein 84 / 107 SoDot-IcmSS PF16848.5 ORF19383 - 0.034 14.1 3.6 0.047 13.7 3.6 1.2 1 0 0 1 1 1 0 Substrate of the Dot/Icm secretion system, putative Adenine_glyco PF03352.13 ORF19383 - 0.039 13.7 1.6 0.044 13.6 1.6 1.1 1 0 0 1 1 1 0 Methyladenine glycosylase CotJB PF12652.7 ORF19383 - 0.06 13.6 0.4 0.092 13.0 0.4 1.3 1 0 0 1 1 1 0 CotJB protein DUF948 PF06103.11 ORF19383 - 0.17 12.2 2.7 0.31 11.3 2.0 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) MCU PF04678.13 ORF19383 - 0.22 11.6 2.3 0.26 11.4 2.3 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter HAD_SAK_1 PF10307.9 ORF19383 - 0.31 10.8 6.8 0.37 10.6 6.8 1.1 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins Atg14 PF10186.9 ORF19383 - 0.81 8.7 6.2 0.96 8.5 6.2 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF19383 - 0.97 10.0 6.3 1.5 9.4 6.3 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region 7tm_7 PF08395.12 ORF18502 - 0.0069 15.6 2.0 0.0073 15.6 2.0 1.0 1 0 0 1 1 1 1 7tm Chemosensory receptor Popeye PF04831.13 ORF17415 - 0.55 10.4 3.7 0.69 10.1 3.7 1.1 1 0 0 1 1 1 0 Popeye protein conserved region DUF2650 PF10853.8 ORF17415 - 1.5 8.6 6.5 0.26 11.0 2.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2650) zf-C4_Topoisom PF01396.19 ORF17322 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Oxidored_q2 PF00420.24 ORF15393 - 0.0088 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Phage_Mu_Gam PF07352.12 ORF152637 - 0.00017 21.5 5.4 0.00023 21.1 5.4 1.1 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein FAM184 PF15665.5 ORF152637 - 0.00026 20.8 3.5 0.00034 20.5 3.5 1.1 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B LMBR1 PF04791.16 ORF152637 - 0.0011 18.0 0.1 0.0012 17.8 0.1 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein DUF2721 PF11026.8 ORF152637 - 0.017 15.0 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) CR6_interact PF10147.9 ORF152637 - 0.023 14.4 1.9 0.028 14.2 1.9 1.1 1 0 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 Orf78 PF06024.12 ORF152637 - 0.064 13.6 0.1 0.077 13.3 0.1 1.2 1 0 0 1 1 1 0 Orf78 (ac78) ABC_tran_Xtn PF12848.7 ORF152637 - 0.12 12.5 5.5 0.16 12.0 5.5 1.2 1 0 0 1 1 1 0 ABC transporter Intimin_C PF07979.11 ORF152456 - 8.7e-05 22.9 0.9 0.00012 22.4 0.9 1.3 1 0 0 1 1 1 1 Intimin C-type lectin domain DUF1566 PF07603.11 ORF152456 - 0.057 13.8 0.1 0.064 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1566) zf-RING-like PF08746.11 ORF150623 - 1.8 9.0 7.6 1.3 9.4 4.6 2.0 1 1 1 2 2 2 0 RING-like domain Oxidored_q2 PF00420.24 ORF150475 - 0.0088 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Lar_restr_allev PF14354.6 ORF150036 - 0.025 15.0 1.3 0.025 15.0 1.3 1.5 2 0 0 2 2 2 0 Restriction alleviation protein Lar NS3_envE PF02723.14 ORF149893 - 9.2 6.4 10.3 1.7 8.8 2.4 2.2 1 1 1 2 2 2 0 Non-structural protein NS3/Small envelope protein E CSTF1_dimer PF16699.5 ORF149345 - 0.15 11.9 0.3 0.3 10.9 0.2 1.6 1 1 0 1 1 1 0 Cleavage stimulation factor subunit 1, dimerisation domain DUF4817 PF16087.5 ORF149345 - 0.16 11.8 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) GABP-alpha PF11620.8 ORF149345 - 0.25 11.5 0.0 0.35 11.1 0.0 1.1 1 0 0 1 1 1 0 GA-binding protein alpha chain zf-C4_Topoisom PF01396.19 ORF148994 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger zf-RING_2 PF13639.6 ORF148349 - 5.1e-14 52.3 6.9 7.3e-14 51.8 6.9 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF148349 - 2.7e-11 43.0 9.0 1.3e-10 40.8 4.8 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF148349 - 5e-10 39.2 5.1 7.8e-10 38.6 5.1 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF148349 - 2.5e-09 36.8 5.0 3.6e-09 36.3 5.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF148349 - 4.7e-09 36.0 6.9 8.4e-09 35.2 6.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF148349 - 5e-09 35.8 5.7 8.5e-09 35.1 5.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF148349 - 8.3e-09 35.6 6.7 1.8e-08 34.5 6.7 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain Prok-RING_4 PF14447.6 ORF148349 - 2.7e-08 33.5 5.6 4.4e-08 32.9 5.6 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF148349 - 5.7e-08 32.7 7.2 1.8e-06 27.8 1.0 2.4 2 0 0 2 2 2 2 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF148349 - 9.6e-07 28.8 2.2 1.7e-06 28.0 2.2 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FYVE_2 PF02318.16 ORF148349 - 3.1e-05 24.1 12.2 3.4e-05 24.0 12.2 1.1 1 0 0 1 1 1 1 FYVE-type zinc finger RINGv PF12906.7 ORF148349 - 3.4e-05 23.9 4.1 8.5e-05 22.6 4.1 1.7 1 1 0 1 1 1 1 RING-variant domain Zn_ribbon_17 PF17120.5 ORF148349 - 7.2e-05 22.3 4.5 0.00012 21.7 4.5 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_4 PF14570.6 ORF148349 - 0.0002 21.1 4.2 0.00034 20.3 4.2 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Rtf2 PF04641.12 ORF148349 - 0.0022 17.4 2.6 0.0025 17.2 2.6 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger FANCL_C PF11793.8 ORF148349 - 0.0023 18.1 7.5 0.016 15.4 7.5 2.2 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4_4 PF15227.6 ORF148349 - 0.018 15.2 5.6 0.085 13.0 5.6 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-Nse PF11789.8 ORF148349 - 0.03 14.1 5.2 0.052 13.4 5.0 1.6 1 1 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Baculo_RING PF05883.11 ORF148349 - 0.031 14.3 4.6 0.026 14.5 3.5 1.6 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-RING_6 PF14835.6 ORF148349 - 0.039 13.8 2.3 0.11 12.4 2.1 1.9 1 1 1 2 2 2 0 zf-RING of BARD1-type protein 3HCDH_N PF02737.18 ORF148349 - 0.063 13.2 0.7 0.076 12.9 0.7 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Prok-RING_1 PF14446.6 ORF148349 - 0.066 13.2 5.6 2.4 8.1 1.0 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 DUF1272 PF06906.11 ORF148349 - 0.091 12.9 3.1 0.13 12.3 3.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) zf-HC5HC2H PF13771.6 ORF148349 - 0.093 13.0 8.1 0.069 13.4 3.8 2.4 1 1 1 2 2 2 0 PHD-like zinc-binding domain zf-RING-like PF08746.11 ORF148349 - 0.096 13.0 6.2 0.37 11.1 6.1 1.9 1 1 0 1 1 1 0 RING-like domain zf-Di19 PF05605.12 ORF148349 - 0.14 12.5 4.9 6.1 7.2 0.5 2.3 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding PHD PF00628.29 ORF148349 - 0.17 11.8 5.7 0.48 10.4 5.6 1.9 1 1 0 1 1 1 0 PHD-finger Zf_RING PF16744.5 ORF148349 - 0.38 10.9 7.5 0.16 12.1 2.5 2.3 1 1 1 2 2 2 0 KIAA1045 RING finger PHD_4 PF16866.5 ORF148349 - 1.4 9.1 11.1 85 3.3 11.1 2.9 1 1 1 2 2 2 0 PHD-finger DUF3903 PF13043.6 ORF147792 - 0.22 11.3 0.8 0.5 10.2 0.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) EamA PF00892.20 ORF147007 - 1.2e-05 25.5 13.3 1.5e-05 25.2 13.3 1.0 1 0 0 1 1 1 1 EamA-like transporter family FANCI_HD1 PF14679.6 ORF147007 - 0.059 13.3 0.3 0.44 10.5 0.0 2.1 1 1 1 2 2 2 0 FANCI helical domain 1 YibE_F PF07907.11 ORF147007 - 0.59 9.6 12.5 0.63 9.5 10.8 1.7 1 1 1 2 2 2 0 YibE/F-like protein zf-C4_Topoisom PF01396.19 ORF142495 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Sin3_corepress PF08295.12 ORF141971 - 0.0034 17.4 1.5 0.0037 17.3 0.4 1.7 2 0 0 2 2 2 1 Sin3 family co-repressor AAA_26 PF13500.6 ORF141051 - 0.0002 21.3 0.0 0.00022 21.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_31 PF13614.6 ORF141051 - 0.00065 19.7 0.0 0.00081 19.3 0.0 1.2 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 ORF141051 - 0.0046 16.2 0.1 0.39 9.9 0.0 2.0 1 1 1 2 2 2 2 Anion-transporting ATPase ParA PF10609.9 ORF141051 - 0.016 14.7 0.0 0.017 14.6 0.0 1.0 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase DUF4175 PF13779.6 ORF138470 - 0.0029 15.6 2.2 0.0034 15.4 2.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4175) tRNA-synt_1 PF00133.22 ORF138470 - 0.021 13.1 0.1 0.023 12.9 0.1 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) FlxA PF14282.6 ORF138470 - 0.053 13.5 0.2 0.063 13.3 0.2 1.1 1 0 0 1 1 1 0 FlxA-like protein Enkurin PF13864.6 ORF138470 - 0.11 12.9 4.5 0.29 11.6 4.5 1.7 1 1 0 1 1 1 0 Calmodulin-binding Iron_permease PF04120.12 ORF137565 - 0.24 11.2 0.6 0.34 10.7 0.6 1.2 1 0 0 1 1 1 0 Low affinity iron permease DUF1673 PF07895.11 ORF137553 - 0.1 12.3 7.8 0.12 12.1 7.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) TMEM132D_C PF15706.5 ORF137553 - 0.62 9.9 3.6 0.79 9.5 3.6 1.4 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF4636 PF15468.6 ORF137430 - 0.043 13.5 0.2 0.047 13.4 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) zf-C3HC4_3 PF13920.6 ORF136784 - 1.2e-11 44.3 13.1 1.5e-11 43.9 13.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF136784 - 0.00023 20.9 12.7 0.00034 20.4 12.7 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF136784 - 0.0005 20.3 13.8 0.00072 19.8 13.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF136784 - 0.02 14.8 12.7 0.033 14.2 12.7 1.4 1 0 0 1 1 1 0 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF136784 - 0.046 13.6 16.1 0.073 13.0 16.1 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF136784 - 0.32 10.8 13.0 0.53 10.1 13.0 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3HC4_2 PF13923.6 ORF136784 - 0.65 9.9 14.7 1.1 9.2 14.7 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) EPL1 PF10513.9 ORF135692 - 0.0088 16.4 1.5 0.0096 16.3 1.5 1.1 1 0 0 1 1 1 1 Enhancer of polycomb-like HicA_toxin PF07927.12 ORF135692 - 0.1 12.7 0.2 0.19 11.8 0.2 1.5 1 0 0 1 1 1 0 HicA toxin of bacterial toxin-antitoxin, Herpes_UL17 PF04559.12 ORF134383 - 0.06 12.1 0.0 0.078 11.8 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL17 protein DUF4829 PF16111.5 ORF133549 - 0.0076 17.0 1.7 0.01 16.6 1.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4829) MtN3_slv PF03083.16 ORF133019 - 0.17 11.9 3.2 0.22 11.6 3.2 1.3 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange PIG-H PF10181.9 ORF132527 - 0.079 12.8 1.5 0.095 12.6 0.1 1.8 2 0 0 2 2 2 0 GPI-GlcNAc transferase complex, PIG-H component DAP10 PF07213.11 ORF132084 - 0.16 11.9 1.1 0.63 10.0 1.0 2.0 2 0 0 2 2 2 0 DAP10 membrane protein Toxin_7 PF05980.12 ORF131094 - 2.7 8.3 13.2 1.7 9.0 9.7 2.4 2 1 0 2 2 2 0 Toxin 7 WD40 PF00400.32 ORF131014 - 6.8e-09 36.2 0.1 0.00025 21.8 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF131014 - 0.0033 17.7 0.1 0.14 12.4 0.1 2.1 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF131014 - 0.023 13.7 0.0 0.15 11.0 0.0 1.8 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Utp8 PF10395.9 ORF131014 - 0.028 13.0 0.1 0.03 12.8 0.1 1.0 1 0 0 1 1 1 0 Utp8 family Hira PF07569.11 ORF131014 - 0.11 12.2 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 TUP1-like enhancer of split EBA-175_VI PF11556.8 ORF130674 - 0.21 12.0 5.0 13 6.2 2.9 2.3 2 0 0 2 2 2 0 Erythrocyte binding antigen 175 KKLCAg1 PF15204.6 ORF128377 - 0.06 13.5 0.5 0.066 13.3 0.5 1.2 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 PsbM PF05151.12 ORF128184 - 0.0019 17.9 0.1 0.0019 17.9 0.1 1.8 2 0 0 2 2 2 1 Photosystem II reaction centre M protein (PsbM) DUF4381 PF14316.6 ORF128184 - 0.0082 16.4 0.1 0.0082 16.4 0.1 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4381) DctQ PF04290.12 ORF128184 - 0.029 14.3 0.6 0.039 13.9 0.6 1.2 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component Bax1-I PF01027.20 ORF128184 - 0.094 12.5 1.1 0.16 11.8 1.1 1.3 1 1 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 PetL PF05115.14 ORF128184 - 0.22 11.5 4.3 0.4 10.7 4.3 1.4 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) E1-E2_ATPase PF00122.20 ORF128184 - 0.25 10.9 2.0 0.4 10.2 0.5 1.8 2 0 0 2 2 2 0 E1-E2 ATPase DUF1315 PF07023.12 ORF128170 - 0.12 12.5 0.1 0.21 11.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1315) Hemerythrin PF01814.23 ORF126445 - 1.4e-21 77.5 0.1 1.5e-21 77.4 0.1 1.0 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain Transformer PF06495.11 ORF126205 - 0.035 14.2 9.4 0.043 13.9 9.4 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein DUF3481 PF11980.8 ORF124452 - 0.02 14.6 0.1 0.029 14.1 0.1 1.2 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein zf-C4_Topoisom PF01396.19 ORF124192 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger zf-C4_Topoisom PF01396.19 ORF123367 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger DUF2195 PF09961.9 ORF12263 - 0.078 12.9 0.5 0.096 12.6 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2195) zf-C4_Topoisom PF01396.19 ORF122403 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger zf-C4_Topoisom PF01396.19 ORF121844 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger IBN_N PF03810.19 ORF121475 - 0.043 13.7 0.0 0.075 13.0 0.0 1.3 1 0 0 1 1 1 0 Importin-beta N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks267.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks267.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks267.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks267.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- T3SS_LEE_assoc PF13327.6 ORF120191 - 0.012 15.6 0.2 0.013 15.5 0.2 1.1 1 0 0 1 1 1 0 Type III secretion system subunit MDFI PF15316.6 ORF119648 - 0.026 14.6 0.4 0.03 14.4 0.4 1.1 1 0 0 1 1 1 0 MyoD family inhibitor Glyco_hydro_63N PF16923.5 ORF119648 - 0.15 12.1 1.5 0.18 11.9 1.5 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 63 N-terminal domain APOBEC2 PF18772.1 ORF119358 - 0.1 12.6 0.6 0.11 12.5 0.6 1.2 1 0 0 1 1 1 0 APOBEC2 COX15-CtaA PF02628.15 ORF119197 - 0.12 11.4 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Cytochrome oxidase assembly protein Toxin_7 PF05980.12 ORF119178 - 2.7 8.3 13.2 1.7 9.0 9.7 2.4 2 1 0 2 2 2 0 Toxin 7 DUF3627 PF12299.8 ORF119015 - 0.0024 17.9 1.0 0.007 16.4 0.8 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF3627) DUF2262 PF10020.9 ORF119015 - 0.051 14.0 0.4 0.059 13.8 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) DsrC PF04358.13 ORF119015 - 0.1 13.1 0.0 0.13 12.8 0.0 1.2 1 0 0 1 1 1 0 DsrC like protein DUF3715 PF12509.8 ORF118772 - 0.0034 17.4 0.4 0.0037 17.3 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3715) DUF3783 PF12646.7 ORF118769 - 0.0029 17.5 0.2 0.0029 17.5 0.2 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF3783) TFIIB_C_1 PF18542.1 ORF11875 - 0.01 15.9 0.1 0.015 15.3 0.1 1.4 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 ParD PF09386.10 ORF118695 - 0.13 12.7 0.6 3.4 8.1 0.0 2.1 2 0 0 2 2 2 0 Antitoxin ParD NPV_P10 PF05531.12 ORF11868 - 0.016 15.6 2.3 0.026 15.0 1.0 1.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Phage_GP20 PF06810.11 ORF11868 - 0.022 14.5 1.7 0.027 14.3 1.7 1.0 1 0 0 1 1 1 0 Phage minor structural protein GP20 Disintegrin PF00200.23 ORF117875 - 4.4 8.2 14.4 12 6.8 14.4 1.8 1 1 0 1 1 1 0 Disintegrin TT_ORF1 PF02956.14 ORF117569 - 0.53 8.9 8.5 0.56 8.8 8.5 1.2 1 0 0 1 1 1 0 TT viral orf 1 NRIP1_repr_1 PF15687.5 ORF116480 - 0.018 14.8 1.8 0.019 14.6 1.8 1.0 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 1 Ndc1_Nup PF09531.10 ORF116480 - 0.054 12.2 0.1 0.061 12.0 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup KH_9 PF17904.1 ORF116259 - 0.58 10.6 6.9 0.45 10.9 3.9 2.0 1 1 1 2 2 2 0 FMRP KH0 domain Flp1_like PF16982.5 ORF116259 - 0.81 9.1 7.0 0.66 9.4 4.0 2.3 1 1 1 2 2 2 0 Putative Flagellin, Flp1-like, domain Hydrolase_like PF13242.6 ORF116229 - 0.17 12.0 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 HAD-hyrolase-like Benyvirus_14KDa PF07255.11 ORF115023 - 0.075 13.3 1.0 0.1 12.8 1.0 1.2 1 0 0 1 1 1 0 Benyvirus 14KDa protein DUF2619 PF10942.8 ORF114944 - 0.058 13.5 0.0 0.081 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2619) zf-RING_11 PF17123.5 ORF114944 - 0.095 12.5 2.0 0.17 11.7 2.0 1.5 1 0 0 1 1 1 0 RING-like zinc finger zf-HIT PF04438.16 ORF114157 - 0.0039 17.0 12.5 0.0039 17.0 12.5 1.7 2 0 0 2 2 2 1 HIT zinc finger zf-HC5HC2H_2 PF13832.6 ORF114157 - 0.0084 16.3 3.7 0.011 15.9 3.7 1.1 1 0 0 1 1 1 1 PHD-zinc-finger like domain DUF5611 PF18446.1 ORF114157 - 0.023 15.6 0.0 0.029 15.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5611) Cpn10 PF00166.21 ORF113741 - 1.6e-20 72.9 0.0 1.9e-20 72.7 0.0 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit CD20 PF04103.15 ORF110862 - 0.028 14.5 2.1 0.031 14.4 2.1 1.1 1 0 0 1 1 1 0 CD20-like family Cation_ATPase_C PF00689.21 ORF108698 - 0.15 11.8 2.2 0.19 11.4 2.2 1.3 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus zf-C4_Topoisom PF01396.19 ORF107819 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Abhydrolase_2 PF02230.16 ORF10767 - 0.014 15.2 0.2 0.016 15.0 0.2 1.0 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase zf-RING-like PF08746.11 ORF10767 - 1.4 9.3 13.9 3.3 8.1 5.8 2.2 1 1 1 2 2 2 0 RING-like domain Ribosomal_L15e PF00827.17 ORF106610 - 0.02 14.6 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal L15 DUF508 PF04370.12 ORF106328 - 0.0026 17.5 0.1 0.0029 17.3 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF508) DUF5575 PF17738.1 ORF106328 - 0.046 12.8 0.3 0.05 12.6 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5575) DUF1980 PF09323.10 ORF106328 - 0.33 10.9 4.9 0.37 10.7 4.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF3292 PF11696.8 ORF104211 - 0.069 11.5 1.3 0.086 11.2 1.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) ETF_alpha PF00766.19 ORF103931 - 2.9e-14 52.9 0.8 4.5e-14 52.2 0.8 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain DUF726 PF05277.12 ORF103931 - 0.019 13.9 0.5 0.021 13.7 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Ysc84 PF04366.12 ORF103931 - 0.11 12.3 0.3 0.11 12.3 0.3 1.4 2 0 0 2 2 2 0 Las17-binding protein actin regulator zf-C4_Topoisom PF01396.19 ORF103327 - 0.028 14.2 0.3 0.057 13.2 0.3 1.4 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Ribosomal_L6e PF01159.19 ORF103188 - 1.6 9.3 7.0 2 9.0 7.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L6e Albumin_I PF08027.11 ORF102042 - 0.035 13.7 1.2 0.056 13.1 0.2 1.9 2 0 0 2 2 2 0 Albumin I chain b HATPase_c PF02518.26 ORF101840 - 5e-06 27.0 0.0 7.1e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSPc PF00782.20 ORF101582 - 2.2e-13 50.2 0.3 3.8e-13 49.4 0.3 1.4 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Ank_2 PF12796.7 ORF101000 - 2e-10 41.1 0.0 5.8e-10 39.6 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF101000 - 7.1e-07 29.1 0.1 0.0025 18.1 0.0 2.8 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF101000 - 3.7e-06 27.1 0.0 0.00018 21.7 0.0 2.5 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF101000 - 1.4e-05 25.6 0.1 0.00025 21.5 0.0 2.5 2 1 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF101000 - 6.7e-05 23.2 0.0 0.0014 19.0 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat BBP1_C PF15272.6 ORF100999 - 0.021 14.6 1.1 0.026 14.3 1.1 1.1 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal DUF1534 PF07551.11 NODE_57388_length_295_cov_1.146154_g49449_i0forward_frame_1 - 0.15 11.8 0.7 0.26 11.1 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1534) ARHGEF5_35 PF15441.6 NODE_57373_length_295_cov_1.642308_g49434_i0reverse_frame_1 - 0.025 13.6 2.5 0.028 13.4 2.5 1.0 1 0 0 1 1 1 0 Rho guanine nucleotide exchange factor 5/35 CdiI_3 PF18616.1 NODE_57368_length_295_cov_1.738462_g49429_i0reverse_frame_1 - 0.11 12.4 0.1 0.31 11.0 0.0 1.7 1 1 1 2 2 2 0 CDI immunity proteins Takusan PF04822.13 NODE_57366_length_295_cov_1.846154_g49427_i0reverse_frame_1 - 0.035 14.0 2.2 0.046 13.6 2.2 1.1 1 0 0 1 1 1 0 Takusan TMEM43 PF07787.12 NODE_57366_length_295_cov_1.846154_g49427_i0forward_frame_1 - 0.97 8.8 2.4 1 8.7 2.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 Herpes_LMP1 PF05297.11 NODE_57362_length_295_cov_1.942308_g49423_i0forward_frame_1 - 2.2 7.4 8.7 2.4 7.3 8.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) PRA1 PF03208.19 NODE_57362_length_295_cov_1.942308_g49423_i0forward_frame_1 - 2.3 7.8 9.2 2.8 7.6 9.2 1.1 1 0 0 1 1 1 0 PRA1 family protein Ribosomal_L24e PF01246.20 NODE_57361_length_295_cov_2.034615_g49422_i0reverse_frame_1 - 0.0071 16.6 0.5 0.01 16.0 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L24e CoA_binding_3 PF13727.6 NODE_57358_length_295_cov_2.088462_g49419_i0reverse_frame_1 - 0.097 12.7 1.1 0.12 12.4 1.1 1.1 1 0 0 1 1 1 0 CoA-binding domain V-ATPase_H_C PF11698.8 NODE_57355_length_295_cov_2.150000_g49416_i0reverse_frame_1 - 3.1e-07 30.5 0.2 0.021 14.9 0.0 2.1 2 0 0 2 2 2 2 V-ATPase subunit H Adaptin_N PF01602.20 NODE_57355_length_295_cov_2.150000_g49416_i0reverse_frame_1 - 0.00015 20.5 1.5 0.00017 20.3 1.5 1.0 1 0 0 1 1 1 1 Adaptin N terminal region SAM_3 PF18016.1 NODE_57355_length_295_cov_2.150000_g49416_i0reverse_frame_1 - 0.093 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF5077 PF16871.5 NODE_57354_length_295_cov_2.153846_g49415_i0forward_frame_1 - 0.1 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5077) zf-C6H2 PF15801.5 NODE_57353_length_295_cov_2.180769_g49414_i0reverse_frame_1 - 0.1 12.9 0.9 0.1 12.9 0.9 1.8 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding KleE PF17394.2 NODE_57350_length_295_cov_2.365385_g49411_i0forward_frame_1 - 0.23 11.7 1.6 0.27 11.5 1.6 1.2 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein TFIIS_C PF01096.18 NODE_57348_length_295_cov_2.415385_g49409_i0reverse_frame_1 - 0.023 14.5 0.3 0.047 13.6 0.3 1.6 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) Ndr PF03096.14 NODE_57343_length_295_cov_2.653846_g49404_i0forward_frame_1 - 0.049 12.3 0.1 0.055 12.2 0.1 1.1 1 0 0 1 1 1 0 Ndr family V_ATPase_I PF01496.19 NODE_57341_length_295_cov_2.750000_g49402_i0forward_frame_1 - 1.9e-31 108.9 3.6 2.1e-31 108.7 3.6 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF3716 PF12511.8 NODE_57336_length_295_cov_2.957692_g49397_i0forward_frame_1 - 0.26 11.4 6.0 0.96 9.5 6.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) SNAP PF14938.6 NODE_57333_length_295_cov_3.073077_g49394_i0reverse_frame_1 - 0.08 12.4 0.1 0.1 12.0 0.1 1.0 1 0 0 1 1 1 0 Soluble NSF attachment protein, SNAP Pox_A32 PF04665.12 NODE_57332_length_295_cov_3.119231_g49393_i0forward_frame_1 - 0.016 14.7 0.1 0.018 14.5 0.1 1.0 1 0 0 1 1 1 0 Poxvirus A32 protein Prot_inhib_II PF02428.15 NODE_57330_length_295_cov_3.450000_g49391_i0reverse_frame_1 - 0.058 13.8 1.0 0.11 12.9 1.0 1.6 1 1 1 2 2 2 0 Potato type II proteinase inhibitor family Nop14 PF04147.12 NODE_57319_length_295_cov_48.430769_g49380_i0reverse_frame_1 - 0.093 10.9 0.1 0.11 10.7 0.1 1.0 1 0 0 1 1 1 0 Nop14-like family RL11D PF11088.8 NODE_57318_length_295_cov_51.076923_g49379_i0reverse_frame_1 - 0.058 13.7 0.8 0.058 13.7 0.8 1.8 2 0 0 2 2 2 0 Glycoprotein encoding membrane proteins RL5A and RL6 MMR_HSR1_Xtn PF16897.5 NODE_57314_length_295_cov_55.473077_g49375_i0reverse_frame_1 - 0.028 14.4 0.2 0.046 13.7 0.2 1.4 1 1 0 1 1 1 0 C-terminal region of MMR_HSR1 domain TehB PF03848.14 NODE_57314_length_295_cov_55.473077_g49375_i0reverse_frame_1 - 0.029 13.8 0.2 0.034 13.5 0.2 1.1 1 0 0 1 1 1 0 Tellurite resistance protein TehB Exo_endo_phos PF03372.23 NODE_57314_length_295_cov_55.473077_g49375_i0reverse_frame_1 - 0.2 11.2 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Pox_Ag35 PF03286.14 NODE_57313_length_295_cov_56.192308_g49374_i0forward_frame_1 - 1.8 8.3 21.9 2.1 8.1 21.9 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein PNISR PF15996.5 NODE_57313_length_295_cov_56.192308_g49374_i0forward_frame_1 - 4.9 7.4 17.7 5.4 7.2 17.7 1.0 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR Roughex PF06020.11 NODE_57313_length_295_cov_56.192308_g49374_i0forward_frame_1 - 5 6.1 9.4 5.5 6.0 9.4 1.2 1 0 0 1 1 1 0 Drosophila roughex protein DUF1155 PF06633.11 NODE_57312_length_295_cov_57.565385_g49373_i0reverse_frame_1 - 0.052 13.0 0.9 2.6 7.6 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1155) MFS_1 PF07690.16 NODE_57304_length_295_cov_68.934615_g49365_i0reverse_frame_1 - 0.00071 18.6 0.0 0.00071 18.6 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily BT1 PF03092.16 NODE_57304_length_295_cov_68.934615_g49365_i0reverse_frame_1 - 0.072 11.3 0.0 0.072 11.3 0.0 1.0 1 0 0 1 1 1 0 BT1 family IBV_3B PF03622.13 NODE_57304_length_295_cov_68.934615_g49365_i0forward_frame_1 - 0.038 14.1 0.0 0.06 13.5 0.0 1.3 1 0 0 1 1 1 0 IBV 3B protein DUF2222 PF09984.9 NODE_57301_length_295_cov_75.950000_g49362_i0reverse_frame_1 - 0.063 13.2 0.2 1 9.3 0.0 2.0 1 1 1 2 2 2 0 Uncharacterised signal transduction histidine kinase domain (DUF2222) HHA PF05321.11 NODE_57301_length_295_cov_75.950000_g49362_i0reverse_frame_1 - 0.088 13.1 0.1 0.15 12.4 0.1 1.4 1 0 0 1 1 1 0 Haemolysin expression modulating protein Pox_D5 PF03288.16 NODE_57292_length_295_cov_94.969231_g49353_i0reverse_frame_1 - 0.0052 17.3 0.2 0.017 15.6 0.0 1.8 2 0 0 2 2 2 1 Poxvirus D5 protein-like LDB19 PF13002.7 NODE_57288_length_295_cov_144.700000_g49349_i0reverse_frame_1 - 0.077 12.7 0.5 0.1 12.3 0.5 1.1 1 0 0 1 1 1 0 Arrestin_N terminal like Dscam_C PF12355.8 NODE_57286_length_295_cov_178.469231_g49347_i0reverse_frame_1 - 0.32 12.0 4.2 0.41 11.6 4.2 1.2 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal DUF4201 PF13870.6 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 2.2e-07 30.8 3.1 2.2e-07 30.8 3.1 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4201) HALZ PF02183.18 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 0.0049 17.1 0.9 0.0049 17.1 0.9 1.9 3 0 0 3 3 3 1 Homeobox associated leucine zipper DivIC PF04977.15 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 0.023 14.4 2.6 0.023 14.4 2.6 1.9 1 1 1 2 2 2 0 Septum formation initiator SWI-SNF_Ssr4 PF08549.10 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 0.072 11.7 1.0 0.073 11.7 1.0 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) Ly49 PF08391.10 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_1 - 1.2 9.6 6.0 0.64 10.4 3.8 1.7 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region DUF2259 PF10016.9 NODE_57283_length_295_cov_209.153846_g49344_i0reverse_frame_1 - 0.12 12.3 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Predicted secreted protein (DUF2259) zf-nanos PF05741.13 NODE_57280_length_295_cov_246.334615_g49341_i0reverse_frame_1 - 0.016 15.4 0.8 0.18 12.1 0.2 2.2 2 0 0 2 2 2 0 Nanos RNA binding domain OS-D PF03392.13 NODE_57280_length_295_cov_246.334615_g49341_i0reverse_frame_1 - 0.018 15.1 0.4 0.025 14.7 0.3 1.3 1 1 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D TB PF00683.17 NODE_57280_length_295_cov_246.334615_g49341_i0forward_frame_1 - 0.087 12.6 5.7 0.27 11.0 5.7 1.8 1 1 0 1 1 1 0 TB domain DAN PF03045.15 NODE_57279_length_295_cov_309.357692_g49340_i0forward_frame_1 - 0.0096 15.9 0.9 0.013 15.5 0.9 1.4 1 1 0 1 1 1 1 DAN domain NinF PF05810.12 NODE_57279_length_295_cov_309.357692_g49340_i0forward_frame_1 - 0.28 11.1 0.2 0.28 11.1 0.2 1.7 2 0 0 2 2 2 0 NinF protein DUF2950 PF11453.8 NODE_57277_length_295_cov_327.303846_g49338_i0reverse_frame_1 - 0.027 13.7 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2950) DUF2591 PF10765.9 NODE_57277_length_295_cov_327.303846_g49338_i0forward_frame_1 - 0.018 15.3 0.0 0.019 15.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2591) U1snRNP70_N PF12220.8 NODE_57274_length_295_cov_844.026923_g49335_i0forward_frame_1 - 0.0002 21.9 0.3 0.00026 21.5 0.3 1.2 1 0 0 1 1 1 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal zf-RING-like PF08746.11 NODE_57269_length_296_cov_0.969349_g49330_i0forward_frame_1 - 0.041 14.2 7.3 0.11 12.8 1.5 2.3 1 1 1 2 2 2 0 RING-like domain CEBP_ZZ PF16366.5 NODE_57263_length_296_cov_1.283525_g49324_i0reverse_frame_1 - 0.098 12.9 1.3 0.13 12.5 0.9 1.4 1 1 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Roc PF08477.13 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 2e-09 37.7 0.0 2.5e-09 37.4 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 1.2e-07 31.5 0.0 1.4e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Arf PF00025.21 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 0.0033 16.9 0.0 0.0035 16.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family TniB PF05621.11 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 0.028 13.8 0.0 0.03 13.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein AAA_7 PF12775.7 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_1 - 0.051 13.1 0.0 0.054 13.0 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region TPR_1 PF00515.28 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 2.4e-09 36.6 0.0 5.8e-05 22.7 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 7e-09 35.2 0.3 1.5e-05 24.8 0.0 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 3.3e-07 30.2 0.0 6.9e-06 26.1 0.1 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 2e-05 24.2 0.0 0.17 11.6 0.0 2.3 2 0 0 2 2 2 2 TPR repeat TPR_2 PF07719.17 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 0.00019 21.3 0.6 0.16 12.2 0.0 2.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 0.001 19.3 0.0 0.0019 18.5 0.0 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 0.17 12.6 0.0 0.2 12.3 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_20 PF14561.6 NODE_57254_length_296_cov_1.524904_g49315_i0forward_frame_1 - 0.22 11.9 0.0 0.29 11.5 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat YdjM PF04307.14 NODE_57250_length_296_cov_1.605364_g49311_i0reverse_frame_1 - 0.088 12.1 0.0 0.092 12.0 0.0 1.2 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase Podoplanin PF05808.11 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 3.9e-06 27.0 3.9 5.3e-06 26.6 3.9 1.2 1 0 0 1 1 1 1 Podoplanin TMEM154 PF15102.6 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 2.3e-05 24.4 0.5 2.5e-05 24.2 0.5 1.1 1 0 0 1 1 1 1 TMEM154 protein family Rax2 PF12768.7 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 4.3e-05 23.1 0.0 4.7e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Cortical protein marker for cell polarity Glycophorin_A PF01102.18 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.00046 20.4 0.3 0.00075 19.7 0.3 1.4 1 1 0 1 1 1 1 Glycophorin A DUF4711 PF15829.5 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.0039 17.2 0.3 0.0047 16.9 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4711) TMEM51 PF15345.6 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.004 17.0 0.1 0.0044 16.9 0.1 1.0 1 0 0 1 1 1 1 Transmembrane protein 51 Orf78 PF06024.12 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.0073 16.6 0.0 0.0092 16.3 0.0 1.2 1 0 0 1 1 1 1 Orf78 (ac78) DUF1616 PF07760.11 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.029 13.7 0.0 0.032 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) EssA PF10661.9 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.083 12.7 0.6 0.11 12.3 0.6 1.2 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA DUF2771 PF10969.8 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.17 11.9 0.7 1.6 8.8 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2771) SSP160 PF06933.11 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.22 9.7 6.4 0.21 9.8 6.4 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 ETRAMP PF09716.10 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.22 11.6 3.8 0.38 10.8 3.8 1.5 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) BNIP3 PF06553.12 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.22 11.2 1.8 0.22 11.2 0.4 1.7 1 1 0 1 1 1 0 BNIP3 Flp1_like PF16982.5 NODE_57248_length_296_cov_1.628352_g49309_i0forward_frame_1 - 0.28 10.6 7.5 0.11 12.0 4.6 1.8 1 1 1 2 2 2 0 Putative Flagellin, Flp1-like, domain Ice_nucleation PF00818.17 NODE_57243_length_296_cov_1.685824_g49304_i0forward_frame_1 - 0.018 15.1 0.4 0.043 13.9 0.4 1.7 1 0 0 1 1 1 0 Ice nucleation protein repeat ANAPC4_WD40 PF12894.7 NODE_57238_length_296_cov_1.823755_g49299_i0forward_frame_1 - 0.0088 16.3 0.0 0.013 15.7 0.0 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 NODE_57238_length_296_cov_1.823755_g49299_i0forward_frame_1 - 0.074 12.9 0.1 0.093 12.6 0.1 1.3 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A PX PF00787.24 NODE_57229_length_296_cov_1.973180_g49290_i0reverse_frame_1 - 2.8e-13 49.8 0.1 3.2e-13 49.6 0.1 1.0 1 0 0 1 1 1 1 PX domain T_cell_tran_alt PF15128.6 NODE_57223_length_296_cov_2.249042_g49284_i0reverse_frame_1 - 0.26 11.1 1.3 0.34 10.7 1.0 1.4 1 1 0 1 1 1 0 T-cell leukemia translocation-altered CBM_19 PF03427.13 NODE_57222_length_296_cov_2.283525_g49283_i0forward_frame_1 - 0.019 15.0 3.6 0.019 15.0 3.6 1.7 1 1 0 1 1 1 0 Carbohydrate binding domain (family 19) Aa_trans PF01490.18 NODE_57221_length_296_cov_2.344828_g49282_i0forward_frame_1 - 0.0012 17.6 2.0 0.0013 17.5 2.0 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein YfdX PF10938.8 NODE_57219_length_296_cov_2.398467_g49280_i0reverse_frame_1 - 0.058 13.3 0.1 0.12 12.3 0.0 1.5 2 0 0 2 2 2 0 YfdX protein Orbi_VP7 PF00897.17 NODE_57219_length_296_cov_2.398467_g49280_i0reverse_frame_1 - 0.19 10.7 0.0 0.22 10.5 0.0 1.1 1 0 0 1 1 1 0 Orbivirus inner capsid protein VP7 TetR_N PF00440.23 NODE_57215_length_296_cov_2.521073_g49276_i0reverse_frame_1 - 3.2e-16 58.9 0.2 4.2e-16 58.5 0.2 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 NODE_57215_length_296_cov_2.521073_g49276_i0reverse_frame_1 - 0.042 14.0 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase PT PF04886.12 NODE_57214_length_296_cov_2.528736_g49275_i0forward_frame_1 - 0.02 14.4 0.3 0.034 13.7 0.3 1.3 1 0 0 1 1 1 0 PT repeat INSC_LBD PF16748.5 NODE_57211_length_296_cov_2.662835_g49272_i0reverse_frame_1 - 0.25 10.8 0.0 0.25 10.8 0.0 2.5 4 0 0 4 4 4 0 Inscuteable LGN-binding domain DNA_pol_B_2 PF03175.13 NODE_57207_length_296_cov_2.724138_g49268_i0forward_frame_1 - 1e-06 27.9 0.0 1.2e-06 27.7 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral Mer2 PF09074.10 NODE_57205_length_296_cov_2.785441_g49266_i0reverse_frame_1 - 0.016 15.0 0.2 0.018 14.9 0.2 1.0 1 0 0 1 1 1 0 Mer2 Pacifastin_I PF05375.13 NODE_57205_length_296_cov_2.785441_g49266_i0forward_frame_1 - 6.4 6.6 9.0 5.4 6.8 3.8 2.2 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) TSC22 PF01166.18 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_1 - 0.063 13.6 0.4 0.11 12.9 0.4 1.3 1 0 0 1 1 1 0 TSC-22/dip/bun family DUF4210 PF13915.6 NODE_57192_length_296_cov_3.892720_g49253_i0forward_frame_1 - 0.057 14.0 0.0 0.085 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) Tna_leader PF08053.11 NODE_57186_length_296_cov_6.482759_g49247_i0reverse_frame_1 - 0.036 14.0 0.5 0.13 12.3 0.0 2.1 2 0 0 2 2 2 0 Tryptophanase operon leader peptide DUF5643 PF18705.1 NODE_57179_length_296_cov_42.536398_g49240_i0reverse_frame_1 - 0.16 11.9 0.1 6.9 6.7 0.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5643) SOCS_box PF07525.16 NODE_57179_length_296_cov_42.536398_g49240_i0forward_frame_1 - 0.028 14.8 0.3 0.05 14.0 0.3 1.4 1 0 0 1 1 1 0 SOCS box SPOC PF07744.13 NODE_57175_length_296_cov_51.647510_g49236_i0reverse_frame_1 - 0.097 12.6 1.5 0.12 12.3 1.5 1.1 1 0 0 1 1 1 0 SPOC domain GPR_Gpa2_C PF11970.8 NODE_57175_length_296_cov_51.647510_g49236_i0forward_frame_1 - 0.9 9.7 4.9 0.28 11.3 1.5 1.8 2 0 0 2 2 2 0 G protein-coupled glucose receptor regulating Gpa2 C-term SWIM PF04434.17 NODE_57170_length_296_cov_57.532567_g49231_i0reverse_frame_1 - 0.61 9.8 3.5 1.1 9.0 3.5 1.5 1 0 0 1 1 1 0 SWIM zinc finger Etmic-2 PF06670.11 NODE_57170_length_296_cov_57.532567_g49231_i0forward_frame_1 - 0.13 11.1 2.0 0.14 11.1 2.0 1.0 1 0 0 1 1 1 0 Microneme protein Etmic-2 3HCDH_N PF02737.18 NODE_57168_length_296_cov_59.570881_g49229_i0forward_frame_1 - 1.9e-22 80.0 0.0 2.1e-22 79.9 0.0 1.0 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LpxB PF02684.15 NODE_57168_length_296_cov_59.570881_g49229_i0forward_frame_1 - 0.068 12.0 0.8 0.078 11.8 0.8 1.1 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase Glyco_hydro_80 PF13647.6 NODE_57167_length_296_cov_60.984674_g49228_i0forward_frame_1 - 0.12 11.9 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A Lar_restr_allev PF14354.6 NODE_57167_length_296_cov_60.984674_g49228_i0forward_frame_1 - 0.38 11.1 4.8 0.66 10.4 4.8 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_6 PF14599.6 NODE_57167_length_296_cov_60.984674_g49228_i0forward_frame_1 - 0.66 10.0 6.0 0.24 11.4 1.7 2.1 1 1 1 2 2 2 0 Zinc-ribbon DUF5465 PF17553.2 NODE_57163_length_296_cov_68.118774_g49224_i0reverse_frame_1 - 0.28 11.8 2.5 0.68 10.6 2.5 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5465) Laminin_EGF PF00053.24 NODE_57159_length_296_cov_70.475096_g49220_i0forward_frame_1 - 0.00073 19.6 2.3 0.0014 18.7 2.3 1.6 1 1 0 1 1 1 1 Laminin EGF domain TMEM100 PF16311.5 NODE_57155_length_296_cov_74.283525_g49216_i0forward_frame_1 - 0.43 10.2 2.3 0.81 9.3 2.1 1.6 1 1 0 1 1 1 0 Transmembrane protein 100 SBF_like PF13593.6 NODE_57149_length_296_cov_86.827586_g49210_i0reverse_frame_1 - 1.4e-15 57.5 0.5 1.4e-15 57.4 0.5 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) DUF2633 PF11119.8 NODE_57139_length_296_cov_212.325670_g49201_i0reverse_frame_1 - 0.046 13.6 1.5 0.084 12.8 1.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) MGS PF02142.22 NODE_57124_length_296_cov_1089.183908_g49186_i0reverse_frame_1 - 0.025 14.8 0.0 0.025 14.8 0.0 1.1 1 0 0 1 1 1 0 MGS-like domain ODC_AZ PF02100.17 NODE_57124_length_296_cov_1089.183908_g49186_i0forward_frame_1 - 0.0072 16.3 0.0 0.011 15.7 0.0 1.5 1 1 0 1 1 1 1 Ornithine decarboxylase antizyme XPB_DRD PF18458.1 NODE_57120_length_296_cov_21235.080460_g49182_i0forward_frame_1 - 0.23 11.4 0.1 0.34 10.8 0.1 1.3 1 0 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain PADR1 PF08063.12 NODE_57116_length_297_cov_1.057252_g49178_i0reverse_frame_1 - 0.057 13.2 0.1 0.1 12.4 0.1 1.5 1 0 0 1 1 1 0 PADR1 (NUC008) domain DUF4059 PF13268.6 NODE_57115_length_297_cov_1.068702_g49177_i0reverse_frame_1 - 0.011 16.1 0.6 0.018 15.4 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4059) PyrI_C PF02748.15 NODE_57111_length_297_cov_1.187023_g49173_i0forward_frame_1 - 0.026 14.4 3.3 0.052 13.4 3.3 1.5 1 0 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF2859 PF11072.8 NODE_57110_length_297_cov_1.194656_g49172_i0forward_frame_1 - 0.18 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) E1-E2_ATPase PF00122.20 NODE_57100_length_297_cov_1.515267_g49162_i0reverse_frame_1 - 3.9e-12 46.1 0.4 3.9e-12 46.1 0.4 1.5 2 0 0 2 2 2 1 E1-E2 ATPase IL6 PF00489.17 NODE_57100_length_297_cov_1.515267_g49162_i0reverse_frame_1 - 0.089 12.4 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 Interleukin-6/G-CSF/MGF family Lamprin PF06403.11 NODE_57093_length_297_cov_1.687023_g49155_i0forward_frame_1 - 0.0087 16.0 2.2 0.016 15.2 0.2 1.9 2 0 0 2 2 2 1 Lamprin HNHc_6 PF16784.5 NODE_57090_length_297_cov_1.736641_g49152_i0reverse_frame_1 - 0.0037 16.8 0.1 0.0041 16.7 0.1 1.1 1 0 0 1 1 1 1 Putative HNHc nuclease V_ATPase_I PF01496.19 NODE_57085_length_297_cov_1.843511_g49147_i0forward_frame_1 - 7.6e-26 90.3 0.8 8.2e-26 90.2 0.8 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Arm-DNA-bind_2 PF12167.8 NODE_57082_length_297_cov_1.885496_g49144_i0forward_frame_1 - 8.4e-14 51.2 0.0 1.9e-13 50.1 0.0 1.6 2 0 0 2 2 2 1 Arm DNA-binding domain Phage_int_SAM_3 PF14659.6 NODE_57082_length_297_cov_1.885496_g49144_i0forward_frame_1 - 0.00014 22.0 0.1 0.0002 21.5 0.1 1.2 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain PKcGMP_CC PF16808.5 NODE_57081_length_297_cov_1.904580_g49143_i0reverse_frame_1 - 0.025 14.4 0.1 0.051 13.4 0.1 1.6 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Fumerase PF05681.14 NODE_57081_length_297_cov_1.904580_g49143_i0reverse_frame_1 - 0.085 12.3 0.0 0.095 12.1 0.0 1.0 1 0 0 1 1 1 0 Fumarate hydratase (Fumerase) Class_IIIsignal PF04021.12 NODE_57066_length_297_cov_2.133588_g49128_i0forward_frame_1 - 3.7 7.7 5.6 5.3 7.2 5.6 1.2 1 0 0 1 1 1 0 Class III signal peptide BBP1_C PF15272.6 NODE_57063_length_297_cov_2.213740_g49125_i0reverse_frame_1 - 0.025 14.4 2.5 0.028 14.3 2.5 1.1 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal N6-adenineMlase PF10237.9 NODE_57061_length_297_cov_2.232824_g49123_i0forward_frame_1 - 0.074 12.9 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase HDC PF02329.16 NODE_57059_length_297_cov_2.316794_g49121_i0forward_frame_1 - 0.049 12.7 0.1 0.055 12.5 0.1 1.1 1 0 0 1 1 1 0 Histidine carboxylase PI chain DUF668 PF05003.12 NODE_57054_length_297_cov_2.564885_g49116_i0forward_frame_1 - 0.077 13.5 0.0 0.094 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF668) TraS PF10624.9 NODE_57047_length_297_cov_2.877863_g49109_i0forward_frame_1 - 0.0018 18.2 0.2 0.0021 18.0 0.2 1.1 1 0 0 1 1 1 1 Plasmid conjugative transfer entry exclusion protein TraS TIG_2 PF18020.1 NODE_57045_length_297_cov_2.912214_g49107_i0reverse_frame_1 - 0.071 13.7 0.3 0.089 13.4 0.3 1.2 1 0 0 1 1 1 0 TIG domain found in plexin Flavi_capsid PF01003.19 NODE_57043_length_297_cov_3.003817_g49105_i0reverse_frame_1 - 0.2 11.4 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Flavivirus capsid protein C DUF188 PF02639.14 NODE_57043_length_297_cov_3.003817_g49105_i0forward_frame_1 - 4.5e-19 68.4 0.0 5.6e-19 68.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized BCR, YaiI/YqxD family COG1671 Hydrolase_6 PF13344.6 NODE_57043_length_297_cov_3.003817_g49105_i0forward_frame_1 - 0.056 13.6 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF4510 PF14971.6 NODE_57041_length_297_cov_3.049618_g49103_i0reverse_frame_1 - 0.082 13.3 9.4 0.087 13.2 9.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4510) Lamprin PF06403.11 NODE_57039_length_297_cov_3.286260_g49101_i0forward_frame_1 - 0.0078 16.2 10.5 0.02 14.9 7.1 2.1 1 1 1 2 2 2 2 Lamprin RrnaAD PF00398.20 NODE_57032_length_297_cov_4.335878_g49094_i0forward_frame_1 - 0.052 12.6 0.0 0.061 12.4 0.0 1.0 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Molybdopterin_N PF18364.1 NODE_57031_length_297_cov_4.339695_g49093_i0reverse_frame_1 - 0.12 12.5 1.5 5.6 7.1 0.0 2.3 2 0 0 2 2 2 0 Molybdopterin oxidoreductase N-terminal domain IL12p40_C PF10420.9 NODE_57023_length_297_cov_28.835878_g49085_i0forward_frame_1 - 0.023 15.2 0.2 0.031 14.8 0.2 1.1 1 0 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus zf-C2HC_2 PF13913.6 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_1 - 0.015 15.2 0.5 0.041 13.8 0.5 1.8 1 0 0 1 1 1 0 zinc-finger of a C2HC-type Hormone_3 PF00159.18 NODE_56989_length_297_cov_186.343511_g49051_i0reverse_frame_1 - 0.11 12.5 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Pancreatic hormone peptide DUF3331 PF11811.8 NODE_56986_length_297_cov_207.885496_g49048_i0reverse_frame_1 - 0.077 12.9 0.1 0.096 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) Sclerostin PF05463.11 NODE_56984_length_297_cov_497.729008_g49046_i0reverse_frame_1 - 0.014 15.1 1.4 0.015 15.0 1.4 1.1 1 0 0 1 1 1 0 Sclerostin (SOST) Steroid_dh PF02544.16 NODE_56981_length_297_cov_1218.603053_g49043_i0reverse_frame_1 - 2.8 7.9 16.3 0.29 11.1 8.6 2.0 1 1 1 2 2 2 0 3-oxo-5-alpha-steroid 4-dehydrogenase DUF2833 PF11090.8 NODE_56981_length_297_cov_1218.603053_g49043_i0forward_frame_1 - 0.0056 17.0 0.3 0.008 16.5 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2833) HMG_box PF00505.19 NODE_56979_length_297_cov_1837.362595_g49041_i0forward_frame_1 - 6.6e-14 52.1 3.0 1.9e-07 31.4 0.0 2.4 3 0 0 3 3 3 2 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_56979_length_297_cov_1837.362595_g49041_i0forward_frame_1 - 6.1e-08 33.1 2.5 0.00015 22.3 0.1 2.7 2 1 1 3 3 3 2 HMG-box domain DUF4096 PF13340.6 NODE_56973_length_297_cov_73406.664122_g49035_i0forward_frame_1 - 0.067 13.4 0.6 0.11 12.7 0.6 1.4 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) SURNod19 PF07712.12 NODE_56970_length_298_cov_1.205323_g49032_i0reverse_frame_3 - 0.031 13.0 0.0 0.032 13.0 0.0 1.1 1 0 0 1 1 1 0 Stress up-regulated Nod 19 SE PF08491.10 NODE_56965_length_298_cov_1.433460_g49027_i0forward_frame_3 - 0.015 14.4 0.0 0.015 14.4 0.0 1.1 1 0 0 1 1 1 0 Squalene epoxidase DUF3146 PF11344.8 NODE_56964_length_298_cov_1.444867_g49026_i0forward_frame_3 - 0.065 12.9 0.1 0.094 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3146) ASFV_p27 PF06556.11 NODE_56961_length_298_cov_1.471483_g49023_i0reverse_frame_2 - 0.016 15.3 0.4 0.021 14.9 0.4 1.3 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus Mannosyl_trans PF05007.13 NODE_56961_length_298_cov_1.471483_g49023_i0forward_frame_2 - 8.3e-13 48.8 5.0 9.9e-13 48.5 5.0 1.1 1 0 0 1 1 1 1 Mannosyltransferase (PIG-M) GCFC PF07842.12 NODE_56960_length_298_cov_1.479087_g49022_i0reverse_frame_3 - 0.069 12.7 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 GC-rich sequence DNA-binding factor-like protein PI31_Prot_N PF11566.8 NODE_56958_length_298_cov_1.562738_g49020_i0reverse_frame_2 - 0.082 12.7 0.2 0.094 12.5 0.2 1.2 1 1 0 1 1 1 0 PI31 proteasome regulator N-terminal DUF5554 PF17709.1 NODE_56955_length_298_cov_1.596958_g49017_i0forward_frame_3 - 0.014 15.5 0.1 0.023 14.8 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5554) Cofilin_ADF PF00241.20 NODE_56953_length_298_cov_1.623574_g49015_i0forward_frame_3 - 0.21 11.4 2.0 0.27 11.0 2.0 1.1 1 0 0 1 1 1 0 Cofilin/tropomyosin-type actin-binding protein IFT57 PF10498.9 NODE_56944_length_298_cov_1.847909_g49006_i0forward_frame_3 - 0.0097 14.9 2.5 0.011 14.7 2.5 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF4354 PF14263.6 NODE_56941_length_298_cov_1.927757_g49003_i0forward_frame_2 - 0.14 12.0 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) TauE PF01925.19 NODE_56940_length_298_cov_1.939163_g49002_i0reverse_frame_3 - 3e-12 46.7 13.5 3.5e-12 46.5 13.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Nop25 PF09805.9 NODE_56939_length_298_cov_1.946768_g49001_i0forward_frame_2 - 0.91 10.0 6.3 1.1 9.7 6.3 1.1 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) Pox_Ag35 PF03286.14 NODE_56939_length_298_cov_1.946768_g49001_i0forward_frame_2 - 1.5 8.6 7.7 1.5 8.6 7.7 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein SDA1 PF05285.12 NODE_56939_length_298_cov_1.946768_g49001_i0forward_frame_2 - 1.5 8.2 13.1 1.9 7.9 13.1 1.1 1 0 0 1 1 1 0 SDA1 PB1 PF00564.24 NODE_56939_length_298_cov_1.946768_g49001_i0forward_frame_2 - 1.7 8.6 5.3 3.1 7.8 5.3 1.5 1 0 0 1 1 1 0 PB1 domain RTT107_BRCT_5 PF16770.5 NODE_56936_length_298_cov_2.076046_g48998_i0reverse_frame_3 - 0.034 14.0 0.4 0.042 13.7 0.4 1.3 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain DUF1700 PF08006.11 NODE_56936_length_298_cov_2.076046_g48998_i0reverse_frame_3 - 0.26 10.8 3.7 0.32 10.5 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF3854 PF12965.7 NODE_56934_length_298_cov_2.110266_g48996_i0forward_frame_2 - 0.08 12.9 0.3 0.1 12.6 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks268.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks268.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks268.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks268.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Connexin43 PF03508.13 NODE_56929_length_298_cov_2.235741_g48991_i0forward_frame_2 - 2.6 7.7 5.5 0.5 10.0 1.8 1.8 2 0 0 2 2 2 0 Gap junction alpha-1 protein (Cx43) p12I PF12233.8 NODE_56928_length_298_cov_2.250951_g48990_i0reverse_frame_3 - 0.026 15.0 0.1 0.031 14.8 0.1 1.1 1 0 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein cEGF PF12662.7 NODE_56927_length_298_cov_2.254753_g48989_i0forward_frame_3 - 0.081 12.9 1.0 0.16 12.0 1.0 1.6 1 0 0 1 1 1 0 Complement Clr-like EGF-like adh_short PF00106.25 NODE_56924_length_298_cov_2.353612_g48986_i0reverse_frame_3 - 0.00015 21.3 0.1 0.00018 21.0 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Enterotoxin_ST PF02048.16 NODE_56924_length_298_cov_2.353612_g48986_i0reverse_frame_2 - 0.0014 19.1 0.9 0.0014 19.1 0.9 2.2 2 1 0 2 2 2 1 Heat-stable enterotoxin ST Phage_holin_2_3 PF16080.5 NODE_56924_length_298_cov_2.353612_g48986_i0forward_frame_3 - 0.23 11.2 1.1 0.39 10.5 0.1 1.9 2 0 0 2 2 2 0 Bacteriophage holin family HP1 DUF3720 PF12517.8 NODE_56923_length_298_cov_2.361217_g48985_i0reverse_frame_3 - 0.16 12.9 0.0 0.21 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3720) Oxidored_molyb PF00174.19 NODE_56922_length_298_cov_2.361217_g48984_i0reverse_frame_2 - 1.5e-12 47.5 0.0 1.6e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain ANTH PF07651.16 NODE_56918_length_298_cov_2.688213_g48980_i0forward_frame_2 - 0.022 13.7 0.3 0.024 13.6 0.3 1.1 1 0 0 1 1 1 0 ANTH domain Fimbrial PF00419.20 NODE_56913_length_298_cov_2.931559_g48975_i0forward_frame_3 - 8.3e-08 32.6 1.1 9.2e-08 32.5 1.1 1.0 1 0 0 1 1 1 1 Fimbrial protein CBP_BcsF PF11120.8 NODE_56912_length_298_cov_2.946768_g48974_i0reverse_frame_3 - 0.14 12.3 0.9 0.39 10.9 0.2 1.9 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsF TTL PF03133.15 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_2 - 6.2e-18 64.9 0.1 6.6e-18 64.9 0.1 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Dala_Dala_lig_C PF07478.13 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_2 - 0.0017 17.9 0.0 0.0019 17.8 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_ST PF14397.6 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_2 - 0.0041 16.4 0.0 0.0051 16.1 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 NODE_56912_length_298_cov_2.946768_g48974_i0forward_frame_2 - 0.0066 15.7 0.0 0.0066 15.7 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp Metallophos PF00149.28 NODE_56909_length_298_cov_3.817490_g48971_i0reverse_frame_2 - 0.00042 20.9 0.0 0.00043 20.9 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 NODE_56909_length_298_cov_3.817490_g48971_i0reverse_frame_2 - 0.058 13.6 0.0 0.098 12.9 0.0 1.5 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Peptidase_C53 PF05550.11 NODE_56908_length_298_cov_4.391635_g48970_i0reverse_frame_2 - 0.082 12.6 0.0 0.11 12.2 0.0 1.3 1 1 0 1 1 1 0 Pestivirus Npro endopeptidase C53 DUF2650 PF10853.8 NODE_56908_length_298_cov_4.391635_g48970_i0forward_frame_2 - 4.3 7.1 11.8 5.2 6.9 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2650) TraI_2_C PF07515.11 NODE_56901_length_298_cov_30.231939_g48963_i0reverse_frame_2 - 0.025 14.5 4.1 0.03 14.3 4.1 1.3 1 0 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term FapA PF03961.13 NODE_56901_length_298_cov_30.231939_g48963_i0reverse_frame_2 - 0.21 10.2 8.0 0.23 10.0 8.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Torus PF16131.5 NODE_56901_length_298_cov_30.231939_g48963_i0reverse_frame_2 - 0.95 10.2 7.8 0.32 11.7 5.0 1.6 1 1 0 1 1 1 0 Torus domain DUF4083 PF13314.6 NODE_56900_length_298_cov_38.471483_g48962_i0reverse_frame_2 - 0.097 12.6 0.6 0.22 11.5 0.6 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4083) APC_u15 PF16636.5 NODE_56894_length_298_cov_54.745247_g48956_i0reverse_frame_3 - 0.5 10.8 4.1 0.16 12.4 1.6 1.4 2 0 0 2 2 2 0 Unstructured region on APC between APC_crr regions 5 and 6 Ank_5 PF13857.6 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 1e-11 44.8 2.0 2.2e-07 31.0 0.3 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 1.4e-11 44.6 0.2 2.6e-08 34.2 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 1.8e-09 38.0 0.0 2.3e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 5.1e-07 29.8 0.2 0.0003 21.1 0.1 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 NODE_56893_length_298_cov_55.346008_g48955_i0reverse_frame_2 - 4.9e-06 26.5 0.0 0.0013 19.1 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat CholecysA-Rec_N PF09193.10 NODE_56893_length_298_cov_55.346008_g48955_i0forward_frame_3 - 0.18 11.8 0.6 13 5.9 0.0 2.4 3 0 0 3 3 3 0 Cholecystokinin A receptor, N-terminal BacA PF02673.18 NODE_56892_length_298_cov_62.855513_g48954_i0forward_frame_2 - 0.045 13.5 0.3 0.045 13.5 0.3 1.1 1 0 0 1 1 1 0 Bacitracin resistance protein BacA FPN1 PF06963.12 NODE_56891_length_298_cov_63.034221_g48953_i0forward_frame_3 - 0.02 13.5 1.2 0.023 13.3 1.2 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) TBCC_N PF16752.5 NODE_56889_length_298_cov_65.494297_g48951_i0reverse_frame_3 - 0.019 15.4 0.6 0.03 14.8 0.6 1.3 1 0 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain DUF3627 PF12299.8 NODE_56889_length_298_cov_65.494297_g48951_i0reverse_frame_3 - 0.037 14.1 0.0 0.052 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3627) DUF5446 PF17522.2 NODE_56889_length_298_cov_65.494297_g48951_i0reverse_frame_3 - 0.12 12.6 2.9 1.7 8.9 0.1 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5446) NKAP PF15692.5 NODE_56889_length_298_cov_65.494297_g48951_i0reverse_frame_2 - 3.1 8.6 9.1 6.7 7.5 9.1 1.6 1 1 0 1 1 1 0 NF-kappa-B-activating protein zn-ribbon_14 PF16503.5 NODE_56888_length_298_cov_66.349810_g48950_i0reverse_frame_3 - 0.051 13.1 0.7 0.097 12.2 0.7 1.5 1 0 0 1 1 1 0 Zinc-ribbon DUF1572 PF07609.11 NODE_56883_length_298_cov_71.631179_g48945_i0forward_frame_3 - 0.17 11.7 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) Dimer_Tnp_hAT PF05699.14 NODE_56880_length_298_cov_71.790875_g48942_i0reverse_frame_3 - 0.091 12.6 0.2 0.13 12.1 0.2 1.5 1 1 0 1 1 1 0 hAT family C-terminal dimerisation region HCR PF07111.12 NODE_56878_length_298_cov_75.144487_g48940_i0reverse_frame_3 - 0.022 12.9 6.5 0.024 12.7 6.5 1.0 1 0 0 1 1 1 0 Alpha helical coiled-coil rod protein (HCR) DUF4050 PF13259.6 NODE_56878_length_298_cov_75.144487_g48940_i0reverse_frame_3 - 0.25 11.6 5.6 0.29 11.4 5.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) DUF3523 PF12037.8 NODE_56878_length_298_cov_75.144487_g48940_i0reverse_frame_2 - 0.11 11.8 10.8 0.13 11.7 10.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) Fungus-induced PF10917.8 NODE_56878_length_298_cov_75.144487_g48940_i0forward_frame_2 - 1.2 9.5 3.0 2.5 8.5 2.7 1.7 1 1 0 1 1 1 0 Fungus-induced protein KASH PF10541.9 NODE_56877_length_298_cov_75.311787_g48939_i0reverse_frame_3 - 0.13 12.5 2.7 0.22 11.8 2.7 1.4 1 0 0 1 1 1 0 Nuclear envelope localisation domain MAP17 PF15807.5 NODE_56877_length_298_cov_75.311787_g48939_i0reverse_frame_3 - 0.15 12.3 0.1 0.18 12.0 0.1 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 EVC2_like PF12297.8 NODE_56877_length_298_cov_75.311787_g48939_i0reverse_frame_3 - 0.18 10.5 1.8 0.2 10.3 1.8 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein HTH_AsnC-type PF13404.6 NODE_56877_length_298_cov_75.311787_g48939_i0reverse_frame_2 - 0.071 12.9 1.2 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain I-EGF_1 PF18372.1 NODE_56874_length_298_cov_84.623574_g48936_i0reverse_frame_3 - 0.0035 17.4 4.8 0.011 15.8 4.8 1.9 1 0 0 1 1 1 1 Integrin beta epidermal growth factor like domain 1 Exc PF07825.11 NODE_56874_length_298_cov_84.623574_g48936_i0reverse_frame_2 - 0.079 13.0 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Excisionase-like protein DGC PF08859.11 NODE_56874_length_298_cov_84.623574_g48936_i0forward_frame_3 - 0.068 13.3 0.3 0.083 13.0 0.3 1.2 1 0 0 1 1 1 0 DGC domain DUF4830 PF16112.5 NODE_56873_length_298_cov_85.615970_g48935_i0forward_frame_2 - 0.1 13.1 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) GTP_EFTU PF00009.27 NODE_56872_length_298_cov_85.798479_g48934_i0forward_frame_3 - 0.00055 19.5 1.0 0.00079 19.0 1.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Tmemb_185A PF10269.9 NODE_56871_length_298_cov_87.437262_g48933_i0forward_frame_2 - 0.044 13.5 3.6 0.047 13.4 3.6 1.0 1 0 0 1 1 1 0 Transmembrane Fragile-X-F protein EF-hand_1 PF00036.32 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_3 - 7.2e-06 25.2 0.3 0.057 13.0 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_3 - 7.4e-05 23.1 0.1 0.00011 22.5 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_3 - 0.0016 18.2 0.2 0.45 10.6 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 NODE_56869_length_298_cov_89.661597_g48931_i0reverse_frame_3 - 0.15 12.0 0.7 0.35 10.8 0.7 1.5 1 1 0 1 1 1 0 EF-hand domain pair OstA_2 PF13100.6 NODE_56868_length_298_cov_100.319392_g48930_i0reverse_frame_2 - 0.047 13.3 0.0 0.061 12.9 0.0 1.1 1 0 0 1 1 1 0 OstA-like protein THF_DHG_CYH_C PF02882.19 NODE_56867_length_298_cov_102.034221_g48929_i0reverse_frame_2 - 0.2 10.9 0.1 0.21 10.9 0.1 1.1 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FAR1 PF03101.15 NODE_56866_length_298_cov_103.148289_g48928_i0reverse_frame_3 - 0.064 14.0 2.2 0.14 12.8 2.2 1.5 1 1 0 1 1 1 0 FAR1 DNA-binding domain RHS PF03527.14 NODE_56866_length_298_cov_103.148289_g48928_i0reverse_frame_3 - 0.11 12.3 0.7 0.63 9.8 0.1 2.3 2 1 0 2 2 2 0 RHS protein DUF3437 PF11919.8 NODE_56865_length_298_cov_103.585551_g48927_i0reverse_frame_3 - 0.064 13.2 2.4 0.18 11.7 2.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3437) X8 PF07983.13 NODE_56862_length_298_cov_119.954373_g48924_i0reverse_frame_2 - 0.16 12.6 2.1 0.15 12.7 0.6 1.7 2 0 0 2 2 2 0 X8 domain Flp_C PF05202.12 NODE_56861_length_298_cov_128.927757_g48923_i0reverse_frame_2 - 0.01 15.3 2.2 0.011 15.3 2.2 1.1 1 0 0 1 1 1 0 Recombinase Flp protein Dpy-30 PF05186.13 NODE_56860_length_298_cov_164.600760_g48922_i0reverse_frame_3 - 1.5e-17 62.9 0.0 2.6e-17 62.2 0.0 1.4 1 0 0 1 1 1 1 Dpy-30 motif RIIa PF02197.17 NODE_56860_length_298_cov_164.600760_g48922_i0reverse_frame_3 - 1.4e-05 24.7 0.5 2.5e-05 23.9 0.1 1.6 2 0 0 2 2 2 1 Regulatory subunit of type II PKA R-subunit LacY_symp PF01306.19 NODE_56860_length_298_cov_164.600760_g48922_i0forward_frame_3 - 1.4 7.6 12.7 1.7 7.4 12.7 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter PSRT PF07636.11 NODE_56859_length_298_cov_168.228137_g48921_i0forward_frame_3 - 0.0004 20.0 3.8 0.0004 20.0 3.8 2.2 2 0 0 2 2 2 1 PSRT SufE PF02657.15 NODE_56855_length_298_cov_208.266160_g48917_i0reverse_frame_2 - 0.075 12.9 0.1 0.1 12.4 0.1 1.2 1 0 0 1 1 1 0 Fe-S metabolism associated domain MerR PF00376.23 NODE_56855_length_298_cov_208.266160_g48917_i0forward_frame_2 - 0.16 11.8 0.0 0.28 11.0 0.0 1.3 1 0 0 1 1 1 0 MerR family regulatory protein Toxin_32 PF08120.11 NODE_56849_length_298_cov_11876.916350_g48911_i0reverse_frame_3 - 0.21 11.4 0.2 0.34 10.8 0.2 1.3 1 0 0 1 1 1 0 Tamulustoxin family NPBW PF15180.6 NODE_56849_length_298_cov_11876.916350_g48911_i0reverse_frame_3 - 0.38 10.6 2.6 2.5 8.0 1.0 2.0 1 1 1 2 2 2 0 Neuropeptides B and W Erf4 PF10256.9 NODE_56846_length_299_cov_0.965909_g48908_i0forward_frame_2 - 0.11 12.6 0.6 0.16 12.1 0.4 1.4 1 1 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family TMEM251 PF15190.6 NODE_56842_length_299_cov_1.238636_g48904_i0forward_frame_2 - 0.42 10.6 2.2 0.51 10.3 2.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 251 FA_FANCE PF11510.8 NODE_56839_length_299_cov_1.359848_g48901_i0reverse_frame_3 - 0.097 12.0 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 Fanconi Anaemia group E protein FANCE MASE4 PF17158.4 NODE_56837_length_299_cov_1.363636_g48899_i0forward_frame_2 - 8.5e-10 38.3 9.8 8.5e-10 38.3 9.8 1.7 1 1 1 2 2 2 1 Membrane-associated sensor, integral membrane domain SID-1_RNA_chan PF13965.6 NODE_56837_length_299_cov_1.363636_g48899_i0forward_frame_2 - 0.018 13.5 3.2 0.017 13.5 3.2 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF1129 PF06570.11 NODE_56837_length_299_cov_1.363636_g48899_i0forward_frame_2 - 0.028 13.9 0.8 0.031 13.8 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF3687 PF12459.8 NODE_56837_length_299_cov_1.363636_g48899_i0forward_frame_2 - 1.2 8.7 7.5 5.4 6.6 0.0 2.9 4 0 0 4 4 4 0 D-Ala-teichoic acid biosynthesis protein DUF5482 PF17579.2 NODE_56834_length_299_cov_1.473485_g48896_i0reverse_frame_2 - 0.13 12.1 0.0 0.2 11.5 0.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5482) DUF4769 PF15992.5 NODE_56832_length_299_cov_1.530303_g48894_i0reverse_frame_3 - 0.21 11.3 2.2 0.22 11.3 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) MDMPI_C PF07398.11 NODE_56831_length_299_cov_1.659091_g48893_i0forward_frame_3 - 0.043 14.7 0.6 0.043 14.7 0.6 1.5 2 0 0 2 2 2 0 MDMPI C-terminal domain UCH PF00443.29 NODE_56826_length_299_cov_1.795455_g48888_i0reverse_frame_2 - 0.0011 18.5 0.0 0.0013 18.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Oxidored_q5_N PF01059.17 NODE_56825_length_299_cov_1.795455_g48887_i0reverse_frame_2 - 0.52 10.4 5.5 2.8 8.1 5.6 1.9 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Toxin-JAB1 PF15659.6 NODE_56824_length_299_cov_1.848485_g48886_i0reverse_frame_3 - 0.012 15.9 0.4 0.017 15.4 0.4 1.2 1 0 0 1 1 1 0 JAB-like toxin 1 S_layer_C PF05124.12 NODE_56824_length_299_cov_1.848485_g48886_i0reverse_frame_3 - 0.063 13.3 0.9 0.071 13.1 0.9 1.0 1 0 0 1 1 1 0 S-layer like family, C-terminal region Pre-SET PF05033.16 NODE_56824_length_299_cov_1.848485_g48886_i0forward_frame_3 - 0.0097 16.5 0.6 0.011 16.4 0.6 1.1 1 0 0 1 1 1 1 Pre-SET motif XK-related PF09815.9 NODE_56820_length_299_cov_1.946970_g48882_i0forward_frame_2 - 0.043 12.9 0.1 0.054 12.6 0.1 1.1 1 0 0 1 1 1 0 XK-related protein DUF384 PF04064.13 NODE_56817_length_299_cov_2.034091_g48879_i0reverse_frame_3 - 0.14 12.0 0.1 0.19 11.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF384) rve_3 PF13683.6 NODE_56817_length_299_cov_2.034091_g48879_i0forward_frame_3 - 0.087 12.6 1.0 0.13 12.1 0.2 1.7 2 0 0 2 2 2 0 Integrase core domain TcdA_TcdB_pore PF12920.7 NODE_56817_length_299_cov_2.034091_g48879_i0forward_frame_3 - 0.38 8.9 4.0 0.48 8.6 4.0 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain PAPS_reduct PF01507.19 NODE_56817_length_299_cov_2.034091_g48879_i0forward_frame_3 - 0.48 10.5 4.3 0.75 9.8 3.9 1.6 1 1 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family DUF4145 PF13643.6 NODE_56817_length_299_cov_2.034091_g48879_i0forward_frame_3 - 1.1 9.4 4.4 0.84 9.8 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4145) YcaO_C PF18381.1 NODE_56814_length_299_cov_2.162879_g48876_i0forward_frame_2 - 1.1e-36 126.3 0.2 1.2e-36 126.2 0.2 1.0 1 0 0 1 1 1 1 YcaO cyclodehydratase C-terminal domain SPOR PF05036.13 NODE_56814_length_299_cov_2.162879_g48876_i0forward_frame_2 - 0.17 12.3 0.0 0.33 11.4 0.0 1.5 2 0 0 2 2 2 0 Sporulation related domain Presenilin PF01080.17 NODE_56813_length_299_cov_2.219697_g48875_i0forward_frame_2 - 0.46 9.2 8.2 0.4 9.4 8.2 1.0 1 0 0 1 1 1 0 Presenilin LacI PF00356.21 NODE_56811_length_299_cov_2.257576_g48873_i0forward_frame_3 - 4.1e-12 45.7 0.8 4.1e-12 45.7 0.8 1.7 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family HTH_3 PF01381.22 NODE_56811_length_299_cov_2.257576_g48873_i0forward_frame_3 - 0.00022 21.2 0.0 0.00047 20.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 NODE_56811_length_299_cov_2.257576_g48873_i0forward_frame_3 - 0.088 13.2 0.0 0.12 12.7 0.0 1.4 2 0 0 2 2 2 0 Helix-turn-helix domain MCM_OB PF17207.3 NODE_56809_length_299_cov_2.314394_g48871_i0reverse_frame_2 - 4.2e-20 71.9 0.0 7.3e-20 71.1 0.0 1.3 1 1 1 2 2 2 1 MCM OB domain Reoviridae_Vp9 PF08978.10 NODE_56809_length_299_cov_2.314394_g48871_i0reverse_frame_2 - 0.075 12.2 0.1 0.098 11.8 0.1 1.1 1 0 0 1 1 1 0 Reoviridae VP9 RcpC PF16976.5 NODE_56809_length_299_cov_2.314394_g48871_i0reverse_frame_2 - 0.14 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Flp pilus assembly protein RcpC/CpaB HrpB7 PF09486.10 NODE_56805_length_299_cov_2.431818_g48867_i0reverse_frame_3 - 0.0081 16.6 0.7 0.21 12.0 0.1 2.0 1 1 1 2 2 2 2 Bacterial type III secretion protein (HrpB7) Laminin_II PF06009.12 NODE_56805_length_299_cov_2.431818_g48867_i0reverse_frame_3 - 0.031 14.3 0.0 0.036 14.1 0.0 1.0 1 0 0 1 1 1 0 Laminin Domain II TolA_bind_tri PF16331.5 NODE_56805_length_299_cov_2.431818_g48867_i0reverse_frame_3 - 0.084 13.0 2.5 0.37 10.9 0.7 2.1 2 0 0 2 2 2 0 TolA binding protein trimerisation Apolipoprotein PF01442.18 NODE_56805_length_299_cov_2.431818_g48867_i0reverse_frame_3 - 0.29 11.0 3.3 0.46 10.3 3.3 1.3 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain TraL PF07178.11 NODE_56803_length_299_cov_2.640152_g48865_i0forward_frame_2 - 0.75 10.3 3.7 21 5.7 0.0 2.0 1 1 1 2 2 2 0 TraL protein cNMP_binding PF00027.29 NODE_56801_length_299_cov_2.689394_g48863_i0reverse_frame_2 - 3.6e-13 49.4 0.0 4.3e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DHBP_synthase PF00926.19 NODE_56801_length_299_cov_2.689394_g48863_i0forward_frame_2 - 0.13 11.8 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 3,4-dihydroxy-2-butanone 4-phosphate synthase MFS_1 PF07690.16 NODE_56800_length_299_cov_2.727273_g48862_i0reverse_frame_2 - 0.00049 19.1 0.3 0.00063 18.8 0.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Na_H_Exchanger PF00999.21 NODE_56796_length_299_cov_2.912879_g48858_i0forward_frame_3 - 0.017 13.9 0.1 0.021 13.7 0.1 1.0 1 0 0 1 1 1 0 Sodium/hydrogen exchanger family Succ_CoA_lig PF13607.6 NODE_56795_length_299_cov_3.064394_g48857_i0reverse_frame_3 - 0.052 13.3 0.0 0.095 12.5 0.0 1.4 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain Chordopox_A30L PF06015.12 NODE_56792_length_299_cov_3.727273_g48854_i0reverse_frame_2 - 0.094 12.6 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Chordopoxvirus A30L protein MukB PF04310.12 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 9e-54 182.7 0.1 9.7e-54 182.6 0.1 1.0 1 0 0 1 1 1 1 MukB N-terminal FTO_NTD PF12933.7 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 0.011 15.0 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 0 FTO catalytic domain AAA_29 PF13555.6 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 0.05 13.4 0.0 0.079 12.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain Chlorophyllase2 PF12740.7 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 0.12 11.3 0.0 0.15 10.9 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase enzyme AAA_23 PF13476.6 NODE_56790_length_299_cov_3.893939_g48852_i0reverse_frame_2 - 0.18 12.3 0.0 0.18 12.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain Syd PF07348.12 NODE_56790_length_299_cov_3.893939_g48852_i0forward_frame_2 - 0.17 11.6 0.1 0.18 11.4 0.1 1.1 1 0 0 1 1 1 0 Syd protein (SUKH-2) DUF1836 PF08876.11 NODE_56787_length_299_cov_4.780303_g48849_i0forward_frame_2 - 0.0034 17.4 3.7 0.005 16.9 3.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1836) ParcG PF10274.9 NODE_56786_length_299_cov_5.696970_g48848_i0reverse_frame_3 - 0.00037 20.7 0.3 0.00044 20.4 0.3 1.2 1 0 0 1 1 1 1 Parkin co-regulated protein ATG13 PF10033.9 NODE_56785_length_299_cov_5.753788_g48847_i0forward_frame_3 - 0.02 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 Autophagy-related protein 13 TA_inhibitor PF17574.2 NODE_56785_length_299_cov_5.753788_g48847_i0forward_frame_2 - 0.13 12.3 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Inhibitor of toxin/antitoxin system (Gp4.5) Herpes_capsid PF06112.11 NODE_56784_length_299_cov_45.871212_g48846_i0reverse_frame_3 - 2.1 8.4 5.7 2.6 8.1 5.7 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein UL42 PF17638.2 NODE_56784_length_299_cov_45.871212_g48846_i0forward_frame_2 - 0.016 15.2 0.0 0.017 15.1 0.0 1.1 1 0 0 1 1 1 0 HCMV UL42 PfkB PF00294.24 NODE_56782_length_299_cov_50.723485_g48844_i0reverse_frame_3 - 1.2e-11 44.5 1.4 1.5e-11 44.2 1.4 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 NODE_56782_length_299_cov_50.723485_g48844_i0reverse_frame_3 - 0.051 13.0 0.2 0.07 12.5 0.2 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase NodS PF05401.11 NODE_56782_length_299_cov_50.723485_g48844_i0reverse_frame_3 - 0.16 11.6 0.4 0.18 11.4 0.4 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) S-antigen PF05756.11 NODE_56780_length_299_cov_52.424242_g48842_i0reverse_frame_3 - 7.8 6.9 8.6 30 5.1 8.6 1.8 1 1 0 1 1 1 0 S-antigen protein MreB_Mbl PF06723.13 NODE_56778_length_299_cov_58.708333_g48840_i0forward_frame_2 - 0.094 11.5 0.0 0.11 11.3 0.0 1.0 1 0 0 1 1 1 0 MreB/Mbl protein TPR_MLP1_2 PF07926.12 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.0035 17.4 17.2 0.0037 17.3 17.2 1.0 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein TEX12 PF15219.6 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.018 15.4 6.7 0.041 14.2 6.7 1.5 1 1 1 2 2 2 0 Testis-expressed 12 RseA_C PF03873.13 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.024 14.9 0.1 0.068 13.4 0.1 1.8 1 0 0 1 1 1 0 Anti sigma-E protein RseA, C-terminal domain Cep57_CLD_2 PF14197.6 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.026 14.6 13.6 0.13 12.4 6.4 2.2 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 Jnk-SapK_ap_N PF09744.9 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.061 13.5 17.1 0.15 12.2 17.1 1.6 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 MCC-bdg_PDZ PF10506.9 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.084 12.9 0.7 0.084 12.9 0.7 2.8 1 1 1 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF3072 PF11272.8 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.11 12.4 1.5 0.31 11.0 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3072) DivIC PF04977.15 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.14 11.9 15.8 0.031 14.1 6.8 2.5 1 1 1 2 2 2 0 Septum formation initiator Leu_zip PF15294.6 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.3 10.6 16.8 0.36 10.3 16.8 1.1 1 0 0 1 1 1 0 Leucine zipper Lectin_N PF03954.14 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.3 10.8 8.5 0.081 12.7 3.2 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain DUF2570 PF10828.8 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 0.54 10.1 15.1 1.6 8.6 7.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) MCU PF04678.13 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 1.4 9.0 4.9 1.5 8.9 4.0 1.5 1 1 0 1 1 1 0 Mitochondrial calcium uniporter FapA PF03961.13 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 1.8 7.1 16.0 1.9 7.0 16.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A ACCA PF03255.14 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 1.8 8.4 11.2 0.3 11.0 5.2 1.9 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Fzo_mitofusin PF04799.13 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 2.3 7.8 9.3 16 5.0 9.2 2.0 1 1 0 1 1 1 0 fzo-like conserved region Swi5 PF07061.11 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 2.6 8.2 14.1 0.38 10.9 5.1 2.3 1 1 1 2 2 2 0 Swi5 bZIP_1 PF00170.21 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 3.3 7.9 20.7 1.9 8.7 2.1 3.0 1 1 2 3 3 3 0 bZIP transcription factor Nas2_N PF18265.1 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 5.7 6.9 10.1 1.4 8.9 1.0 2.9 1 1 2 3 3 3 0 Nas2 N_terminal domain DUF5320 PF17253.2 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 8.3 7.6 10.3 2.7 9.1 1.6 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Spc24 PF08286.11 NODE_56776_length_299_cov_66.719697_g48838_i0forward_frame_2 - 8.6 6.7 18.1 2.1 8.6 11.6 2.6 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Toxin_22 PF08092.11 NODE_56775_length_299_cov_66.791667_g48837_i0forward_frame_3 - 1.2 9.2 4.0 0.52 10.4 0.6 2.1 2 0 0 2 2 2 0 Magi peptide toxin family PRIMA1 PF16101.5 NODE_56769_length_299_cov_70.795455_g48831_i0reverse_frame_3 - 0.0097 15.9 1.3 0.014 15.4 1.3 1.3 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 Metallothio_Pro PF02069.16 NODE_56769_length_299_cov_70.795455_g48831_i0reverse_frame_2 - 0.063 13.5 4.5 0.11 12.7 4.5 1.5 1 0 0 1 1 1 0 Prokaryotic metallothionein SP24 PF16504.5 NODE_56761_length_299_cov_85.784091_g48823_i0reverse_frame_2 - 0.098 12.7 0.0 0.27 11.3 0.0 1.6 2 0 0 2 2 2 0 Putative virion membrane protein of plant and insect virus Rrn6 PF10214.9 NODE_56759_length_299_cov_103.511364_g48821_i0reverse_frame_2 - 0.061 11.8 0.2 0.063 11.8 0.2 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor NOG1_N PF17835.1 NODE_56756_length_299_cov_122.454545_g48818_i0reverse_frame_2 - 0.091 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 NOG1 N-terminal helical domain SF3a60_bindingd PF12108.8 NODE_56754_length_299_cov_133.431818_g48816_i0reverse_frame_3 - 0.17 11.8 0.6 0.28 11.1 0.6 1.4 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain Stealth_CR2 PF11380.8 NODE_56753_length_299_cov_143.295455_g48815_i0forward_frame_2 - 0.072 13.3 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Stealth protein CR2, conserved region 2 B56 PF01603.20 NODE_56751_length_299_cov_205.257576_g48813_i0reverse_frame_3 - 0.041 12.9 0.1 0.046 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein phosphatase 2A regulatory B subunit (B56 family) CBP_BcsN PF17038.5 NODE_56751_length_299_cov_205.257576_g48813_i0reverse_frame_3 - 0.088 12.2 0.1 0.1 12.0 0.1 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsN AgrB PF04647.15 NODE_56751_length_299_cov_205.257576_g48813_i0forward_frame_2 - 0.015 14.6 3.2 0.015 14.6 3.2 1.7 1 1 1 2 2 2 0 Accessory gene regulator B YdjM PF04307.14 NODE_56751_length_299_cov_205.257576_g48813_i0forward_frame_2 - 0.064 12.6 1.9 0.073 12.4 1.9 1.2 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase STAG PF08514.11 NODE_56749_length_299_cov_228.348485_g48811_i0reverse_frame_3 - 0.034 14.1 4.7 0.045 13.7 4.7 1.2 1 0 0 1 1 1 0 STAG domain Herpes_LMP1 PF05297.11 NODE_56749_length_299_cov_228.348485_g48811_i0reverse_frame_2 - 0.32 10.2 1.0 0.32 10.1 1.0 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) CDC45 PF02724.14 NODE_56749_length_299_cov_228.348485_g48811_i0reverse_frame_2 - 2.2 6.5 11.6 2.4 6.4 11.6 1.0 1 0 0 1 1 1 0 CDC45-like protein MAPEG PF01124.18 NODE_56748_length_299_cov_228.719697_g48810_i0forward_frame_2 - 1 9.3 7.4 0.95 9.4 3.0 2.2 2 0 0 2 2 2 0 MAPEG family zf-RRPl_C4 PF17026.5 NODE_56746_length_299_cov_419.878788_g48808_i0forward_frame_2 - 0.026 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type DUF1199 PF06712.11 NODE_56740_length_300_cov_1.041509_g48802_i0forward_frame_3 - 0.021 14.8 1.0 0.034 14.2 1.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1199) ADAM_CR PF08516.12 NODE_56740_length_300_cov_1.041509_g48802_i0forward_frame_2 - 0.043 14.2 2.7 0.05 14.0 2.7 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich PutA_N PF18083.1 NODE_56739_length_300_cov_1.169811_g48801_i0reverse_frame_3 - 0.082 12.9 0.0 0.15 12.1 0.0 1.4 1 1 1 2 2 2 0 Proline utilization A N-terminal domain Lamprin PF06403.11 NODE_56737_length_300_cov_1.184906_g48799_i0forward_frame_2 - 0.035 14.0 3.1 0.04 13.9 3.1 1.1 1 0 0 1 1 1 0 Lamprin LEAP-2 PF07359.11 NODE_56736_length_300_cov_1.215094_g48798_i0reverse_frame_3 - 0.099 12.5 1.2 0.16 11.8 1.3 1.4 1 1 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Topoisom_bac PF01131.20 NODE_56736_length_300_cov_1.215094_g48798_i0forward_frame_2 - 7.7e-15 54.8 0.0 8.4e-15 54.7 0.0 1.0 1 0 0 1 1 1 1 DNA topoisomerase DUF4581 PF15167.6 NODE_56735_length_300_cov_1.358491_g48797_i0forward_frame_3 - 0.016 15.4 0.0 0.017 15.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4581) Orthoreo_P10 PF07204.11 NODE_56735_length_300_cov_1.358491_g48797_i0forward_frame_3 - 4.3 7.3 9.2 0.43 10.6 0.4 2.0 1 1 1 2 2 2 0 Orthoreovirus membrane fusion protein p10 DUF1980 PF09323.10 NODE_56733_length_300_cov_1.403774_g48795_i0reverse_frame_3 - 0.16 11.9 0.2 0.19 11.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) HAUS-augmin3 PF14932.6 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_3 - 0.0051 16.4 0.5 0.0056 16.3 0.5 1.0 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 MDFI PF15316.6 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_3 - 0.16 12.0 1.5 0.2 11.8 1.5 1.0 1 0 0 1 1 1 0 MyoD family inhibitor DUF3486 PF11985.8 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_3 - 0.17 12.3 6.8 0.19 12.2 6.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) DUF3138 PF11336.8 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_3 - 0.77 8.3 5.6 0.8 8.2 5.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) DUF5421 PF17458.2 NODE_56731_length_300_cov_1.483019_g48793_i0forward_frame_2 - 0.16 11.3 0.0 0.18 11.2 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5421) PHD_4 PF16866.5 NODE_56730_length_300_cov_1.509434_g48792_i0forward_frame_2 - 0.06 13.5 0.0 0.076 13.1 0.0 1.2 1 0 0 1 1 1 0 PHD-finger Pox_A21 PF05323.12 NODE_56728_length_300_cov_1.554717_g48790_i0reverse_frame_2 - 1 10.0 8.5 1.6 9.4 3.9 2.4 2 1 0 2 2 2 0 Poxvirus A21 Protein Runt PF00853.19 NODE_56727_length_300_cov_1.573585_g48789_i0reverse_frame_2 - 0.033 13.7 0.0 0.045 13.3 0.0 1.2 1 0 0 1 1 1 0 Runt domain UCH PF00443.29 NODE_56727_length_300_cov_1.573585_g48789_i0forward_frame_3 - 6.4e-08 32.4 0.0 8.2e-08 32.1 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_56727_length_300_cov_1.573585_g48789_i0forward_frame_3 - 0.06 12.9 0.0 0.065 12.8 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Pkinase PF00069.25 NODE_56726_length_300_cov_1.607547_g48788_i0forward_frame_2 - 1.1e-19 70.8 0.1 1.2e-19 70.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_56726_length_300_cov_1.607547_g48788_i0forward_frame_2 - 4.5e-10 39.3 0.1 5.1e-10 39.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PPDK_N PF01326.19 NODE_56725_length_300_cov_1.618868_g48787_i0forward_frame_3 - 1.2e-07 31.3 0.1 1.5e-07 31.0 0.1 1.1 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DDT PF02791.17 NODE_56724_length_300_cov_1.622642_g48786_i0reverse_frame_3 - 0.12 12.8 0.0 0.14 12.5 0.0 1.4 1 1 0 1 1 1 0 DDT domain VQ PF05678.14 NODE_56724_length_300_cov_1.622642_g48786_i0forward_frame_2 - 0.17 11.4 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 VQ motif Phage_antitermQ PF06530.12 NODE_56721_length_300_cov_1.709434_g48783_i0reverse_frame_2 - 1.9e-10 40.7 0.0 2.4e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Phage antitermination protein Q FBPase_2 PF06874.11 NODE_56720_length_300_cov_1.743396_g48782_i0forward_frame_2 - 0.068 11.4 0.0 0.08 11.2 0.0 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase Ferric_reduct PF01794.19 NODE_56716_length_300_cov_1.800000_g48778_i0forward_frame_3 - 5e-08 33.1 0.2 6.1e-08 32.8 0.2 1.1 1 0 0 1 1 1 1 Ferric reductase like transmembrane component Clavanin PF05452.11 NODE_56716_length_300_cov_1.800000_g48778_i0forward_frame_3 - 0.15 12.2 0.1 0.15 12.2 0.1 1.8 2 0 0 2 2 2 0 Clavanin DUF5621 PF18532.1 NODE_56716_length_300_cov_1.800000_g48778_i0forward_frame_2 - 0.14 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5621) Glutaredoxin PF00462.24 NODE_56713_length_300_cov_1.954717_g48775_i0forward_frame_2 - 0.08 13.2 1.6 0.14 12.4 1.6 1.4 1 0 0 1 1 1 0 Glutaredoxin NRBF2_MIT PF17169.4 NODE_56713_length_300_cov_1.954717_g48775_i0forward_frame_2 - 0.11 12.8 1.0 0.15 12.3 1.0 1.2 1 0 0 1 1 1 0 MIT domain of nuclear receptor-binding factor 2 Sec1 PF00995.23 NODE_56712_length_300_cov_1.988679_g48774_i0reverse_frame_2 - 3.7e-16 59.5 0.8 3.9e-16 59.4 0.8 1.0 1 0 0 1 1 1 1 Sec1 family Pneumo_NS1 PF03438.13 NODE_56712_length_300_cov_1.988679_g48774_i0forward_frame_3 - 0.018 15.2 0.2 0.021 15.0 0.2 1.2 1 0 0 1 1 1 0 Pneumovirus NS1 protein DUF4132 PF13569.6 NODE_56707_length_300_cov_2.098113_g48769_i0forward_frame_3 - 6.3e-11 42.4 0.0 7.5e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4132) IBV_3C PF03620.13 NODE_56706_length_300_cov_2.132075_g48768_i0forward_frame_3 - 0.14 12.6 0.9 1.1 9.8 0.9 2.0 1 1 0 1 1 1 0 IBV 3C protein Toxin_20 PF08089.11 NODE_56704_length_300_cov_2.192453_g48766_i0reverse_frame_3 - 0.014 15.5 1.4 0.03 14.4 1.4 1.5 1 0 0 1 1 1 0 Huwentoxin-II family Baculo_VP91_N PF08475.10 NODE_56703_length_300_cov_2.200000_g48765_i0forward_frame_3 - 0.049 13.3 0.0 0.058 13.1 0.0 1.1 1 0 0 1 1 1 0 Viral capsid protein 91 N-terminal OB_MalK PF17912.1 NODE_56701_length_300_cov_2.237736_g48763_i0forward_frame_3 - 0.00044 21.0 0.0 0.001 19.8 0.0 1.6 1 0 0 1 1 1 1 MalK OB fold domain YqaJ PF09588.10 NODE_56697_length_300_cov_2.460377_g48759_i0forward_frame_3 - 0.0068 16.6 0.1 0.0081 16.3 0.1 1.1 1 0 0 1 1 1 1 YqaJ-like viral recombinase domain TALPID3 PF15324.6 NODE_56697_length_300_cov_2.460377_g48759_i0forward_frame_3 - 0.035 11.8 0.1 0.039 11.6 0.1 1.0 1 0 0 1 1 1 0 Hedgehog signalling target Antimicrobial25 PF16839.5 NODE_56697_length_300_cov_2.460377_g48759_i0forward_frame_2 - 2.1 8.5 7.2 2.3 8.4 0.3 2.2 1 1 1 2 2 2 0 Nematode antimicrobial peptide CD34_antigen PF06365.12 NODE_56694_length_300_cov_2.524528_g48756_i0reverse_frame_2 - 0.0087 15.7 0.5 0.012 15.3 0.5 1.2 1 0 0 1 1 1 1 CD34/Podocalyxin family Pox_EPC_I2-L1 PF12575.8 NODE_56694_length_300_cov_2.524528_g48756_i0reverse_frame_2 - 0.014 15.6 1.7 0.024 14.8 1.7 1.4 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 DUF5527 PF17665.1 NODE_56692_length_300_cov_2.577358_g48754_i0reverse_frame_2 - 0.13 11.8 2.1 0.16 11.5 2.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5527) FA_desaturase PF00487.24 NODE_56689_length_300_cov_2.754717_g48751_i0reverse_frame_3 - 5.3 6.8 5.5 5.3 6.8 5.5 1.1 1 0 0 1 1 1 0 Fatty acid desaturase Tubulin_C PF03953.17 NODE_56688_length_300_cov_2.769811_g48750_i0reverse_frame_3 - 0.016 15.4 0.1 0.02 15.1 0.1 1.2 1 0 0 1 1 1 0 Tubulin C-terminal domain DUF1616 PF07760.11 NODE_56686_length_300_cov_2.856604_g48748_i0forward_frame_3 - 0.13 11.6 0.2 0.14 11.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) TPR_2 PF07719.17 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 3.3e-06 26.8 0.6 5.4e-05 23.0 0.2 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 2.1e-05 23.9 0.9 2.2e-05 23.8 0.9 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.00016 21.3 0.3 0.00098 18.8 0.1 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.00019 21.1 0.6 0.0071 16.0 0.1 2.6 3 1 0 3 3 3 1 TPR repeat TPR_14 PF13428.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.0019 18.8 1.2 0.1 13.5 0.2 2.9 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.0049 16.8 0.4 0.13 12.3 0.1 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.016 15.8 0.3 0.72 10.6 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.021 14.9 0.2 0.081 13.0 0.1 1.8 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.039 14.3 0.5 0.074 13.3 0.5 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat TraE PF05309.11 NODE_56685_length_300_cov_2.860377_g48747_i0reverse_frame_2 - 0.12 11.8 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 TraE protein zf-dskA_traR PF01258.17 NODE_56684_length_300_cov_2.883019_g48746_i0reverse_frame_3 - 2.2e-11 43.5 6.8 2.2e-11 43.5 6.8 2.1 2 0 0 2 2 2 1 Prokaryotic dksA/traR C4-type zinc finger DZR PF12773.7 NODE_56684_length_300_cov_2.883019_g48746_i0reverse_frame_3 - 0.024 14.6 1.2 0.024 14.6 1.2 2.1 2 0 0 2 2 2 0 Double zinc ribbon ArfGap PF01412.18 NODE_56684_length_300_cov_2.883019_g48746_i0reverse_frame_3 - 0.74 9.9 6.2 10 6.2 2.0 2.2 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf Hormone_1 PF00103.20 NODE_56683_length_300_cov_3.011321_g48745_i0reverse_frame_2 - 0.1 12.3 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Somatotropin hormone family Gemin7 PF11095.8 NODE_56683_length_300_cov_3.011321_g48745_i0reverse_frame_2 - 0.16 11.9 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Gem-associated protein 7 (Gemin7) Form-deh_trans PF09163.11 NODE_56682_length_300_cov_3.094340_g48744_i0forward_frame_2 - 0.051 13.4 0.4 0.094 12.5 0.4 1.3 1 0 0 1 1 1 0 Formate dehydrogenase N, transmembrane ArAE_2 PF10334.9 NODE_56681_length_300_cov_3.105660_g48743_i0reverse_frame_3 - 0.057 13.2 0.0 0.082 12.7 0.0 1.2 1 0 0 1 1 1 0 Aromatic acid exporter family member 2 Wzz PF02706.15 NODE_56679_length_300_cov_3.403774_g48741_i0forward_frame_3 - 0.59 10.5 7.2 0.19 12.0 1.5 2.1 2 0 0 2 2 2 0 Chain length determinant protein RCC1_2 PF13540.6 NODE_56677_length_300_cov_3.520755_g48739_i0forward_frame_2 - 0.0059 16.4 3.2 1.1 9.2 0.0 2.6 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat HTH_AsnC-type PF13404.6 NODE_56675_length_300_cov_4.083019_g48737_i0reverse_frame_2 - 0.1 12.5 0.6 0.16 11.8 0.6 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Peptidase_M16_M PF16187.5 NODE_56674_length_300_cov_4.222642_g48736_i0reverse_frame_3 - 8.8e-12 44.9 0.0 1.1e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Middle or third domain of peptidase_M16 TFB6 PF17110.5 NODE_56673_length_300_cov_4.305660_g48735_i0reverse_frame_2 - 0.13 12.0 0.6 0.17 11.6 0.6 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH HP0268 PF18618.1 NODE_56670_length_300_cov_20.596226_g48732_i0forward_frame_2 - 0.034 14.6 1.1 0.041 14.3 0.2 1.5 2 0 0 2 2 2 0 HP0268 Herpes_UL95 PF03038.14 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_2 - 0.03 13.5 1.3 0.031 13.4 1.3 1.2 1 0 0 1 1 1 0 UL95 family UPF0122 PF04297.14 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_2 - 0.043 14.1 2.7 0.061 13.6 2.7 1.2 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like Cas_Csy4 PF09618.10 NODE_56669_length_300_cov_27.637736_g48731_i0reverse_frame_2 - 0.14 12.3 2.0 0.17 12.0 2.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) Lectin_C PF00059.21 NODE_56668_length_300_cov_38.109434_g48730_i0forward_frame_3 - 0.0099 16.6 0.3 0.012 16.3 0.3 1.2 1 0 0 1 1 1 1 Lectin C-type domain TssO PF17561.2 NODE_56665_length_300_cov_49.720755_g48727_i0forward_frame_2 - 0.047 13.8 6.0 0.047 13.8 6.0 1.5 2 0 0 2 2 2 0 Type VI secretion system, TssO Sec20 PF03908.13 NODE_56665_length_300_cov_49.720755_g48727_i0forward_frame_2 - 3.8 7.5 8.5 0.64 10.0 4.6 1.6 1 1 1 2 2 2 0 Sec20 Tachystatin_B PF11478.8 NODE_56662_length_300_cov_53.460377_g48724_i0forward_frame_3 - 0.0067 16.4 3.3 0.014 15.3 3.3 1.6 1 0 0 1 1 1 1 Antimicrobial chitin binding protein tachystatin B BPS1 PF05633.11 NODE_56659_length_300_cov_57.762264_g48721_i0reverse_frame_2 - 6.3 5.7 6.3 7.2 5.5 6.3 1.1 1 0 0 1 1 1 0 Protein BYPASS1-related DUF4489 PF14879.6 NODE_56658_length_300_cov_58.596226_g48720_i0reverse_frame_3 - 0.011 15.8 0.3 0.011 15.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4489) SPW PF03779.14 NODE_56657_length_300_cov_58.803774_g48719_i0reverse_frame_2 - 0.058 13.0 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 SPW repeat DUF3989 PF13150.6 NODE_56655_length_300_cov_60.286792_g48717_i0forward_frame_2 - 0.0005 19.7 0.3 0.00086 19.0 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3989) JAMP PF05571.12 NODE_56654_length_300_cov_65.256604_g48716_i0reverse_frame_3 - 0.23 11.1 1.6 0.27 10.8 1.6 1.2 1 0 0 1 1 1 0 JNK1/MAPK8-associated membrane protein zf-met PF12874.7 NODE_56651_length_300_cov_70.011321_g48713_i0forward_frame_2 - 0.062 13.7 0.4 0.097 13.1 0.4 1.3 1 0 0 1 1 1 0 Zinc-finger of C2H2 type UPF0561 PF10573.9 NODE_56650_length_300_cov_73.132075_g48712_i0forward_frame_2 - 0.032 14.4 0.2 0.035 14.2 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 IF3_C PF00707.22 NODE_56645_length_300_cov_90.501887_g48707_i0reverse_frame_3 - 0.0029 17.6 0.0 0.0046 16.9 0.0 1.2 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain Amidohydro_2 PF04909.14 NODE_56644_length_300_cov_93.173585_g48706_i0forward_frame_2 - 0.019 14.7 0.0 0.034 13.9 0.0 1.4 2 0 0 2 2 2 0 Amidohydrolase DUF4774 PF15999.5 NODE_56638_length_300_cov_133.215094_g48700_i0forward_frame_2 - 0.006 16.4 0.1 0.0079 16.0 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4774) RCC1_2 PF13540.6 NODE_56636_length_300_cov_153.641509_g48698_i0forward_frame_3 - 0.00014 21.6 2.3 0.21 11.4 0.2 2.5 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 NODE_56636_length_300_cov_153.641509_g48698_i0forward_frame_3 - 0.46 10.5 6.4 2.6 8.1 1.1 2.3 2 0 0 2 2 2 0 PheRS DNA binding domain 2 JAB PF01398.21 NODE_56633_length_300_cov_208.305660_g48695_i0forward_frame_3 - 0.065 13.2 0.0 0.075 13.0 0.0 1.2 1 0 0 1 1 1 0 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Churchill PF06573.11 NODE_56632_length_300_cov_220.003774_g48694_i0forward_frame_3 - 0.081 13.3 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Churchill protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks269.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks269.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks269.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks269.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UDPG_MGDP_dh_N PF03721.14 ORF124582 - 2.9e-52 177.0 0.1 7.4e-52 175.6 0.1 1.7 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 ORF124582 - 3.2e-33 114.3 0.1 3.8e-32 110.8 0.1 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 ORF124582 - 6.2e-32 109.7 0.0 1.3e-31 108.6 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 ORF124582 - 0.0019 18.4 0.1 0.086 13.0 0.1 2.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Ycf54 PF10674.9 ORF124582 - 0.12 12.6 0.0 2.2 8.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2488) DUF2420 PF10336.9 ORF124088 - 0.0011 18.9 0.8 0.0041 17.1 0.4 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2420) Asp PF00026.23 ORF122541 - 1.8e-34 119.6 2.0 2.5e-34 119.1 2.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF122541 - 0.012 15.4 0.1 0.051 13.4 0.0 2.1 2 0 0 2 2 2 0 Xylanase inhibitor C-terminal ABC_membrane_3 PF13748.6 ORF122541 - 0.039 13.2 0.0 0.067 12.4 0.0 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region PAG PF15347.6 ORF122541 - 0.085 11.9 0.2 0.12 11.4 0.2 1.1 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched MFS_2 PF13347.6 ORF122541 - 0.095 11.2 0.0 0.14 10.7 0.0 1.2 1 0 0 1 1 1 0 MFS/sugar transport protein Pex26 PF07163.12 ORF120976 - 0.00066 19.1 0.0 0.0016 17.8 0.0 1.6 1 0 0 1 1 1 1 Pex26 protein DUF5572 PF17733.1 ORF120976 - 0.042 13.7 0.5 2.4 8.1 0.0 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5572) Eco57I PF07669.11 ORF120976 - 0.51 10.9 4.5 38 4.9 0.2 3.5 2 1 0 3 3 3 0 Eco57I restriction-modification methylase HEAT_2 PF13646.6 ORF108358 - 7.9e-26 90.3 32.5 4.4e-12 46.2 7.3 5.6 2 2 1 5 5 5 3 HEAT repeats HEAT PF02985.22 ORF108358 - 1.3e-17 62.4 35.1 0.00055 20.0 0.3 10.7 11 0 0 11 11 11 6 HEAT repeat HEAT_EZ PF13513.6 ORF108358 - 1.9e-06 28.3 33.8 0.067 13.7 0.5 8.4 6 3 2 8 8 8 4 HEAT-like repeat Cnd1 PF12717.7 ORF108358 - 5.3e-05 23.3 3.2 0.55 10.3 0.2 4.1 1 1 3 4 4 4 2 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 ORF108358 - 0.00012 20.9 11.9 0.0049 15.5 2.6 3.7 1 1 1 3 3 3 2 Adaptin N terminal region Arm PF00514.23 ORF108358 - 0.00052 20.0 16.4 0.4 10.8 0.3 6.9 7 0 0 7 7 7 1 Armadillo/beta-catenin-like repeat HEAT_PBS PF03130.16 ORF108358 - 0.0095 16.5 28.3 4.2 8.3 1.9 7.9 8 0 0 8 8 8 2 PBS lyase HEAT-like repeat NopRA1 PF16201.5 ORF108358 - 0.049 13.2 9.6 2.2 7.8 0.1 4.8 2 2 3 5 5 5 0 Nucleolar pre-ribosomal-associated protein 1 EDR1 PF14381.6 ORF108358 - 0.15 11.8 0.2 0.97 9.1 0.0 2.1 1 1 0 2 2 2 0 Ethylene-responsive protein kinase Le-CTR1 Cohesin_HEAT PF12765.7 ORF108358 - 0.2 12.0 6.8 4.4 7.7 0.8 4.0 4 0 0 4 4 4 0 HEAT repeat associated with sister chromatid cohesion SpoIIIAH PF12685.7 ORF108334 - 0.0023 17.8 0.7 0.004 17.0 0.7 1.3 1 0 0 1 1 1 1 SpoIIIAH-like protein Zip PF02535.22 ORF108334 - 0.0033 16.7 3.3 0.0047 16.2 3.3 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter EGF_2 PF07974.13 ORF108334 - 0.0081 16.5 13.4 0.021 15.2 13.4 1.7 1 0 0 1 1 1 1 EGF-like domain DUF4064 PF13273.6 ORF108334 - 0.01 16.1 0.0 0.016 15.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) EGF_Tenascin PF18720.1 ORF108334 - 0.016 15.2 8.8 0.031 14.3 8.8 1.5 1 0 0 1 1 1 0 Tenascin EGF domain TSGP1 PF07771.11 ORF108334 - 0.035 14.3 1.5 0.035 14.3 1.5 3.0 3 0 0 3 3 3 0 Tick salivary peptide group 1 OATP PF03137.20 ORF108334 - 0.042 12.1 0.0 0.063 11.6 0.0 1.2 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family EGF PF00008.27 ORF108334 - 5.6 7.4 12.7 0.23 11.8 5.9 2.3 2 1 0 2 2 2 0 EGF-like domain PA PF02225.22 ORF104503 - 5.3e-07 29.6 0.0 1.3e-06 28.3 0.0 1.7 1 0 0 1 1 1 1 PA domain WD40 PF00400.32 ORF97913 - 2e-49 164.5 23.7 7.2e-08 33.0 0.2 7.3 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF97913 - 7e-17 61.5 0.3 0.0089 16.3 0.0 5.9 1 1 5 6 6 6 5 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF97913 - 6.6e-07 29.4 1.3 0.00025 21.0 0.1 3.0 1 1 2 3 3 3 2 Eukaryotic translation initiation factor eIF2A Nup160 PF11715.8 ORF97913 - 2e-06 26.8 0.8 0.54 8.8 0.0 5.0 2 2 3 5 5 5 2 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 ORF97913 - 0.0002 20.4 3.1 0.099 11.6 0.1 4.2 1 1 3 6 6 6 1 WD40 region of Ge1, enhancer of mRNA-decapping protein LCD1 PF09798.9 ORF97913 - 0.069 11.7 12.7 0.09 11.3 12.7 1.1 1 0 0 1 1 1 0 DNA damage checkpoint protein DUF4776 PF16003.5 ORF97913 - 0.12 11.3 14.6 0.17 10.9 14.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4776) V_ATPase_I PF01496.19 ORF97913 - 0.35 8.7 11.2 0.45 8.4 11.2 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family PNMA PF14893.6 ORF97913 - 1.7 7.9 7.7 2.9 7.2 7.7 1.3 1 0 0 1 1 1 0 PNMA DUF4404 PF14357.6 ORF97913 - 2.6 8.8 10.0 4.4 8.0 5.3 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) Prominin PF05478.11 ORF97913 - 2.6 5.9 8.3 4.5 5.1 8.3 1.2 1 0 0 1 1 1 0 Prominin FapA PF03961.13 ORF97913 - 3.8 6.0 12.9 5.6 5.5 12.9 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A MFS_1 PF07690.16 ORF96985 - 3.1e-17 62.5 41.3 3e-11 42.9 14.9 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_5 PF05631.14 ORF96985 - 0.015 14.3 0.5 0.027 13.4 0.5 1.4 1 0 0 1 1 1 0 Sugar-tranasporters, 12 TM WW PF00397.26 ORF83690 - 1.5e-20 73.0 20.6 1.4e-07 31.5 1.3 4.6 4 0 0 4 4 4 4 WW domain WW_1 PF18507.1 ORF83690 - 0.04 13.6 0.2 0.25 11.1 0.0 2.3 2 0 0 2 2 2 0 WW domain fn1 PF00039.18 ORF83690 - 0.16 12.2 1.8 16 5.8 0.3 2.7 2 0 0 2 2 2 0 Fibronectin type I domain REPA_OB_2 PF16900.5 ORF82829 - 6.5e-21 74.1 0.6 5.1e-17 61.6 0.0 2.9 2 0 0 2 2 2 2 Replication protein A OB domain Rep-A_N PF04057.12 ORF82829 - 9.1e-11 41.7 2.0 1.3e-10 41.1 1.2 1.7 2 0 0 2 2 2 1 Replication factor-A protein 1, N-terminal domain tRNA_anti-codon PF01336.25 ORF82829 - 4.2e-09 36.3 3.6 5.1e-07 29.6 0.1 3.4 3 0 0 3 3 3 2 OB-fold nucleic acid binding domain DUF223 PF02721.14 ORF82829 - 0.00084 19.6 0.7 0.00084 19.6 0.7 1.9 2 0 0 2 2 2 1 Domain of unknown function DUF223 ATP11 PF06644.11 ORF80757 - 0.013 15.3 8.4 0.025 14.4 8.4 1.4 1 0 0 1 1 1 0 ATP11 protein DUF1104 PF06518.11 ORF80757 - 0.12 12.7 11.8 0.38 11.2 11.8 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) Hexapep PF00132.24 ORF80757 - 0.18 11.6 0.1 0.38 10.6 0.1 1.6 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) DUF2120 PF09893.9 ORF80757 - 1 9.5 12.2 37 4.4 0.0 3.1 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) DUF4358 PF14270.6 ORF80757 - 1.7 9.0 8.1 0.41 11.0 1.7 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4358) DUF883 PF05957.13 ORF80757 - 2 9.1 5.7 4.7 7.9 5.7 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Z1 PF10593.9 ORF80757 - 7.2 6.0 10.4 1.6 8.2 3.6 2.4 2 1 0 2 2 2 0 Z1 domain LRR_4 PF12799.7 ORF74854 - 2.7e-13 49.9 35.3 4.2e-06 27.0 4.1 6.8 5 2 2 7 7 7 5 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF74854 - 2.7e-10 39.8 36.4 6.3e-06 25.9 11.5 6.4 5 2 0 5 5 5 4 Leucine rich repeat LRR_6 PF13516.6 ORF74854 - 1.8e-09 36.9 27.0 0.42 10.8 0.1 7.7 7 0 0 7 7 7 6 Leucine Rich repeat LRR_1 PF00560.33 ORF74854 - 1.4e-08 34.1 25.6 1.1 10.0 0.1 8.9 8 0 0 8 8 8 4 Leucine Rich Repeat LRR_9 PF14580.6 ORF74854 - 0.23 11.0 12.7 1.3 8.5 1.1 2.9 2 1 1 3 3 3 0 Leucine-rich repeat TIR_2 PF13676.6 ORF69882 - 0.011 16.3 0.0 0.026 15.1 0.0 1.6 1 0 0 1 1 1 0 TIR domain DUF5389 PF17364.2 ORF69882 - 0.047 13.7 4.2 0.99 9.5 1.7 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5389) HET PF06985.11 ORF58737 - 0.038 14.4 0.1 0.079 13.3 0.1 1.5 1 0 0 1 1 1 0 Heterokaryon incompatibility protein (HET) Photo_RC PF00124.19 ORF58196 - 8.3e-66 221.9 21.0 1e-65 221.6 21.0 1.1 1 0 0 1 1 1 1 Photosynthetic reaction centre protein PEMT PF04191.13 ORF58196 - 0.029 14.8 1.7 0.029 14.8 1.7 2.6 4 0 0 4 4 4 0 Phospholipid methyltransferase Photo_RC PF00124.19 ORF55723 - 8.3e-66 221.9 21.0 1e-65 221.6 21.0 1.1 1 0 0 1 1 1 1 Photosynthetic reaction centre protein PEMT PF04191.13 ORF55723 - 0.029 14.8 1.7 0.029 14.8 1.7 2.6 4 0 0 4 4 4 0 Phospholipid methyltransferase DUF4381 PF14316.6 ORF54278 - 1.5 9.1 5.4 30 4.8 5.4 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4381) Ion_trans PF00520.31 ORF53381 - 3.5e-17 62.4 11.2 4.4e-17 62.1 11.2 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF53381 - 0.00018 20.8 0.0 0.00046 19.5 0.0 1.7 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF53381 - 0.0045 16.8 0.0 0.013 15.4 0.0 1.8 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF53381 - 0.058 12.9 0.0 0.14 11.7 0.0 1.7 1 0 0 1 1 1 0 EF hand DUF389 PF04087.14 ORF53381 - 0.07 13.2 0.9 0.72 9.9 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF389) Adaptin_N PF01602.20 ORF52580 - 3.4e-20 72.1 0.0 4.3e-20 71.8 0.0 1.1 1 0 0 1 1 1 1 Adaptin N terminal region B2-adapt-app_C PF09066.10 ORF52580 - 3.5e-19 68.9 0.0 6.8e-19 68.0 0.0 1.5 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain Alpha_adaptinC2 PF02883.20 ORF52580 - 0.014 15.7 0.1 0.034 14.4 0.1 1.8 1 0 0 1 1 1 0 Adaptin C-terminal domain CheY-binding PF09078.11 ORF52580 - 0.057 13.6 0.2 0.12 12.5 0.2 1.6 1 0 0 1 1 1 0 CheY binding FAD_binding_7 PF03441.14 ORF44553 - 6.4e-41 140.1 1.9 3.4e-40 137.7 0.2 2.2 2 0 0 2 2 2 1 FAD binding domain of DNA photolyase DUF1039 PF06287.11 ORF44553 - 0.1 13.1 0.1 0.21 12.1 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1039) UBA PF00627.31 ORF44553 - 0.17 11.8 0.1 0.31 11.0 0.1 1.5 1 0 0 1 1 1 0 UBA/TS-N domain Guanylate_cyc PF00211.20 ORF40755 - 3.2e-31 108.4 0.0 5.4e-31 107.6 0.0 1.2 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Cys_Knot_tox PF17486.2 ORF40755 - 0.063 13.5 1.9 0.17 12.1 1.9 1.6 1 0 0 1 1 1 0 Cystine knot toxins Ion_trans PF00520.31 ORF4040 - 1.5e-23 83.4 11.8 2e-23 82.9 11.8 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF4040 - 7.1e-09 34.9 0.7 0.00058 19.6 0.1 3.0 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF4040 - 2.7e-07 29.6 1.7 0.0031 17.0 0.2 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF4040 - 5.5e-07 29.9 0.4 1.1e-06 28.9 0.4 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF4040 - 6.7e-06 25.9 1.2 0.031 14.1 0.1 2.7 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF4040 - 1.4e-05 24.4 1.0 0.00021 20.6 0.1 2.5 2 0 0 2 2 2 1 EF hand DUF5090 PF17009.5 ORF4040 - 0.21 11.5 2.1 0.43 10.5 2.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) C2 PF00168.30 ORF29843 - 0.0019 18.5 0.1 0.005 17.1 0.1 1.7 1 0 0 1 1 1 1 C2 domain PA PF02225.22 ORF28465 - 2e-05 24.5 0.0 6.3e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 PA domain PhetRS_B1 PF18262.1 ORF145764 - 0.019 15.2 0.3 0.036 14.3 0.3 1.4 1 0 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain DUF1765 PF08578.10 ORF132698 - 4.9 7.6 17.0 6.3 7.3 1.6 4.4 1 1 1 3 3 3 0 Protein of unknown function (DUF1765) Asp PF00026.23 ORF127484 - 5.1e-31 108.3 0.3 7e-31 107.8 0.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease PNTB PF02233.16 ORF123853 - 2.2e-203 676.4 19.6 2.4e-203 676.2 19.6 1.0 1 0 0 1 1 1 1 NAD(P) transhydrogenase beta subunit AA_kinase PF00696.28 ORF123853 - 0.0083 15.7 0.0 0.018 14.6 0.0 1.5 2 0 0 2 2 2 1 Amino acid kinase family TPP_enzyme_M PF00205.22 ORF123853 - 0.011 15.4 1.2 0.062 13.0 0.1 2.7 2 1 1 3 3 3 0 Thiamine pyrophosphate enzyme, central domain Abhydrolase_3 PF07859.13 ORF111662 - 1.1e-17 64.6 0.0 2.9e-17 63.2 0.0 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 ORF111662 - 4.6e-07 29.1 0.0 2.6e-06 26.6 0.0 1.9 1 1 0 1 1 1 1 Carboxylesterase family Peptidase_S9 PF00326.21 ORF111662 - 2.5e-06 27.1 0.1 2.9e-05 23.6 0.0 2.1 2 0 0 2 2 2 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF111662 - 3.7e-05 23.1 0.0 0.062 12.5 0.0 2.4 2 0 0 2 2 2 2 Serine aminopeptidase, S33 FSH1 PF03959.13 ORF111662 - 0.00078 19.2 0.0 0.0041 16.8 0.0 1.9 1 1 0 1 1 1 1 Serine hydrolase (FSH1) DLH PF01738.18 ORF111662 - 0.0024 17.4 0.1 0.05 13.2 0.0 2.5 2 1 0 2 2 2 1 Dienelactone hydrolase family Abhydrolase_2 PF02230.16 ORF111662 - 0.022 14.6 0.0 0.097 12.5 0.0 2.0 3 0 0 3 3 3 0 Phospholipase/Carboxylesterase BAAT_C PF08840.11 ORF111662 - 0.041 13.8 0.0 6.8 6.6 0.0 2.3 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_1 PF00561.20 ORF111662 - 0.14 11.8 0.1 3.1 7.3 0.0 2.2 2 0 0 2 2 2 0 alpha/beta hydrolase fold TauE PF01925.19 ORF10865 - 2.3e-07 30.7 0.8 2.3e-07 30.7 0.8 1.8 2 0 0 2 2 2 1 Sulfite exporter TauE/SafE CZB PF13682.6 ORF10865 - 0.092 13.2 0.2 1.1 9.7 0.0 2.5 2 0 0 2 2 2 0 Chemoreceptor zinc-binding domain WD40 PF00400.32 ORF102727 - 7.6e-22 77.2 14.6 0.00019 22.1 0.1 7.2 7 0 0 7 7 7 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF102727 - 2.1e-06 27.9 2.9 0.013 15.8 0.0 4.8 5 1 1 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF102727 - 0.0023 17.8 1.4 0.2 11.6 0.1 3.2 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat Ricin_B_lectin PF00652.22 ORF102727 - 0.055 13.7 3.4 0.058 13.7 1.6 2.0 1 1 0 1 1 1 0 Ricin-type beta-trefoil lectin domain SPOB_a PF14689.6 NODE_9885_length_1381_cov_74.835810_g7274_i0reverse_frame_1 - 0.44 10.3 3.8 0.19 11.4 0.4 2.2 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain SBF PF01758.16 ORF9910 - 1.4e-38 132.6 15.9 1.4e-38 132.6 15.9 1.7 2 0 0 2 2 2 1 Sodium Bile acid symporter family SBF_like PF13593.6 ORF9910 - 5.1e-15 55.6 21.5 7.2e-15 55.1 21.5 1.2 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) DUF267 PF03268.14 ORF9910 - 0.085 11.7 4.5 0.31 9.9 2.6 2.2 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF267 HisKA PF00512.25 ORF9450 - 0.00021 21.2 2.3 0.0006 19.8 0.1 2.6 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain DUF624 PF04854.14 ORF9450 - 0.14 12.3 5.1 2.4 8.3 0.6 2.9 2 0 0 2 2 2 0 Protein of unknown function, DUF624 DUF1980 PF09323.10 ORF91559 - 0.014 15.3 2.8 0.046 13.6 1.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) DUF1772 PF08592.11 ORF91559 - 3.6 7.9 16.9 3.9 7.8 0.4 3.6 3 1 1 4 4 4 0 Domain of unknown function (DUF1772) Ion_trans PF00520.31 ORF91413 - 8.8e-09 34.9 3.6 1.4e-08 34.3 3.6 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF91413 - 0.0031 17.0 0.0 2.9 7.7 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF91413 - 0.015 15.2 0.0 5.6 7.2 0.0 2.8 2 0 0 2 2 2 0 EF-hand domain DUF4349 PF14257.6 ORF91413 - 0.03 13.8 0.1 0.067 12.6 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Phage_holin_2_4 PF16082.5 ORF91413 - 0.03 14.0 0.0 0.073 12.8 0.0 1.7 1 0 0 1 1 1 0 Bacteriophage holin family, superfamily II-like Myosin_tail_1 PF01576.19 ORF91413 - 0.042 11.7 0.4 0.058 11.2 0.4 1.1 1 0 0 1 1 1 0 Myosin tail DUF641 PF04859.12 ORF91413 - 0.045 14.1 0.3 0.1 12.9 0.3 1.5 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) HMMR_N PF15905.5 ORF91413 - 0.054 13.0 0.1 0.092 12.2 0.1 1.3 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal EF-hand_7 PF13499.6 ORF91413 - 0.067 13.6 0.0 0.44 11.0 0.0 2.2 1 1 2 3 3 3 0 EF-hand domain pair Baculo_PEP_C PF04513.12 ORF91413 - 0.095 12.7 0.9 0.18 11.9 0.9 1.4 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus EF-hand_8 PF13833.6 ORF91413 - 0.12 12.2 0.0 24 4.9 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF91413 - 0.13 11.8 0.1 2.3 7.8 0.0 2.4 2 0 0 2 2 2 0 EF hand DUF4407 PF14362.6 ORF91413 - 0.19 11.0 0.1 0.19 11.0 0.1 1.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4407) AA_permease PF00324.21 ORF8970 - 2.4e-103 346.3 54.7 3e-103 346.0 54.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF8970 - 1e-40 139.9 58.5 1.4e-40 139.5 58.5 1.0 1 0 0 1 1 1 1 Amino acid permease PLDc_2 PF13091.6 ORF7486 - 1.1e-53 180.6 1.3 5.9e-26 90.9 0.2 2.1 2 0 0 2 2 2 2 PLD-like domain HHH_3 PF12836.7 ORF7486 - 3.9e-20 71.9 0.0 6.2e-20 71.2 0.0 1.3 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 ORF7486 - 1.4e-12 46.8 0.2 5.2e-08 32.4 0.0 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif FAM83 PF07894.12 ORF7486 - 9.8e-07 28.6 0.6 0.011 15.3 0.1 3.0 2 1 0 2 2 2 2 FAM83 A-H Regulator_TrmB PF11495.8 ORF7486 - 4.1e-06 26.1 0.1 0.028 13.6 0.0 2.2 2 0 0 2 2 2 2 Archaeal transcriptional regulator TrmB HHH_6 PF14579.6 ORF7486 - 6.3e-06 26.4 0.0 1.8e-05 24.9 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif PLDc PF00614.22 ORF7486 - 2.6e-05 24.2 2.3 0.19 12.0 0.1 2.5 2 0 0 2 2 2 2 Phospholipase D Active site motif HHH_5 PF14520.6 ORF7486 - 8.1e-05 23.1 0.0 0.028 15.0 0.0 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 ORF7486 - 0.00093 19.3 0.0 0.0071 16.4 0.0 2.2 1 1 1 2 2 2 1 Helix-hairpin-helix motif DUF655 PF04919.12 ORF7486 - 0.016 15.2 0.0 0.029 14.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF655) HRDC PF00570.23 ORF7486 - 0.019 14.9 0.0 4.2 7.4 0.0 2.5 2 0 0 2 2 2 0 HRDC domain T2SSK PF03934.13 ORF7486 - 0.032 13.6 0.0 0.06 12.7 0.0 1.4 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein K PsbU PF06514.11 ORF7486 - 0.11 12.5 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 Photosystem II 12 kDa extrinsic protein (PsbU) CRAL_TRIO PF00650.20 ORF63093 - 1.2e-23 83.6 0.0 1.8e-23 83.0 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF63093 - 3.9e-07 30.3 0.0 8.9e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF5523 PF17661.1 ORF63093 - 0.082 12.6 2.0 0.13 12.0 2.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5523) PGA2 PF07543.12 ORF63093 - 4.2 7.3 5.5 8.5 6.4 5.5 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 Gluconate_2-dh3 PF13618.6 ORF56407 - 4.1 7.6 8.6 0.77 10.0 0.7 2.7 2 1 0 2 2 2 0 Gluconate 2-dehydrogenase subunit 3 T2SSE PF00437.20 ORF50747 - 8.6e-88 293.9 0.7 1.2e-87 293.5 0.7 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein T2SSE_N PF05157.15 ORF50747 - 1.3e-05 25.4 0.0 3.9e-05 23.9 0.0 1.8 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein E, N-terminal domain AAA_16 PF13191.6 ORF50747 - 0.00023 21.6 0.4 0.00088 19.7 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_7 PF12775.7 ORF50747 - 0.00029 20.4 0.0 0.0034 16.9 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_30 PF13604.6 ORF50747 - 0.0011 18.7 0.0 0.0037 17.0 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 ORF50747 - 0.0031 17.8 0.9 0.012 15.8 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_11 PF13086.6 ORF50747 - 0.011 15.5 0.0 0.023 14.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF50747 - 0.021 14.9 0.0 0.06 13.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 ORF50747 - 0.022 14.5 0.0 0.054 13.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_19 PF13245.6 ORF50747 - 0.031 14.6 0.2 0.1 12.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain ResIII PF04851.15 ORF50747 - 0.039 14.0 0.0 0.073 13.1 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit PhoH PF02562.16 ORF50747 - 0.053 13.0 0.1 0.46 9.9 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_23 PF13476.6 ORF50747 - 0.082 13.4 0.0 0.17 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF50747 - 0.086 13.3 0.0 0.18 12.2 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 ORF50747 - 0.11 11.7 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NTPase_1 PF03266.15 ORF50747 - 0.12 12.3 0.2 0.74 9.7 0.1 2.3 2 0 0 2 2 2 0 NTPase Tubulin_C PF03953.17 ORF45259 - 2.5e-51 173.1 0.2 4.7e-51 172.2 0.2 1.5 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF45259 - 6.9e-51 173.3 0.0 1.1e-50 172.6 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 ORF45259 - 0.033 13.9 0.0 0.07 12.8 0.0 1.6 1 0 0 1 1 1 0 Tubulin domain IBR PF01485.21 ORF39020 - 6.4e-16 58.3 44.1 1.5e-10 41.2 7.5 3.8 3 1 0 3 3 3 2 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF39020 - 4e-08 33.5 5.4 4e-08 33.5 5.4 3.8 3 2 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF39020 - 5.5e-06 26.0 3.9 5.5e-06 26.0 3.9 2.8 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF39020 - 0.00023 21.1 5.2 0.00023 21.1 5.2 3.7 3 1 0 3 3 3 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF39020 - 0.0038 17.1 5.9 0.0038 17.1 5.9 4.5 3 1 1 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF39020 - 0.0075 16.1 4.9 0.0075 16.1 4.9 4.7 3 1 1 4 4 4 1 Zinc finger, C3HC4 type (RING finger) C1_4 PF07975.12 ORF39020 - 0.014 15.6 6.7 0.014 15.6 6.7 4.4 3 3 2 5 5 5 0 TFIIH C1-like domain RICTOR_M PF14666.6 ORF39020 - 0.064 13.0 0.1 0.22 11.3 0.1 1.8 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain Proton_antipo_M PF00361.20 ORF37281 - 8.3e-50 169.6 31.5 8.3e-50 169.6 31.5 3.0 3 1 1 4 4 4 2 Proton-conducting membrane transporter P-mevalo_kinase PF04275.14 ORF35467 - 0.039 13.9 1.6 4.5 7.2 0.0 2.6 2 0 0 2 2 2 0 Phosphomevalonate kinase XhlA PF10779.9 ORF35467 - 1.3 9.3 6.4 4.1 7.7 0.2 2.9 2 0 0 2 2 2 0 Haemolysin XhlA LMF1 PF06762.14 ORF1999 - 2.6e-91 307.0 11.5 1.2e-48 166.4 5.7 2.0 1 1 0 2 2 2 2 Lipase maturation factor Amidohydro_1 PF01979.20 ORF1457 - 5.2e-21 75.3 0.0 9.4e-21 74.5 0.0 1.4 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF1457 - 2.3e-12 47.1 0.1 1.9e-05 24.3 0.1 3.0 3 0 0 3 3 3 2 Amidohydrolase family Arm PF00514.23 ORF139031 - 1.1e-46 155.5 9.4 3.2e-09 36.5 0.1 7.6 8 0 0 8 8 8 7 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF139031 - 2.8e-13 50.0 0.0 9.8e-07 29.2 0.0 3.4 4 0 0 4 4 4 2 HEAT-like repeat HEAT PF02985.22 ORF139031 - 3.5e-11 42.4 1.5 0.014 15.6 0.1 5.4 6 0 0 6 6 6 3 HEAT repeat HEAT_2 PF13646.6 ORF139031 - 1e-09 38.6 0.0 0.0018 18.7 0.0 3.7 2 2 1 3 3 3 2 HEAT repeats IBB PF01749.20 ORF139031 - 2.8e-08 34.1 4.5 6.1e-08 33.0 4.5 1.6 1 0 0 1 1 1 1 Importin beta binding domain RICTOR_V PF14668.6 ORF139031 - 4.5e-06 26.8 0.9 0.59 10.4 0.0 4.1 3 1 1 4 4 4 3 Rapamycin-insensitive companion of mTOR, domain 5 Cnd1 PF12717.7 ORF139031 - 1.5e-05 25.1 0.2 0.025 14.6 0.0 3.0 2 1 0 3 3 3 2 non-SMC mitotic condensation complex subunit 1 SlyX PF04102.12 ORF136469 - 0.27 11.9 5.5 16 6.2 0.0 3.9 3 1 0 3 3 3 0 SlyX BPD_transp_1 PF00528.22 ORF134835 - 1.4e-22 80.4 13.7 1.4e-22 80.4 13.7 2.3 3 0 0 3 3 3 1 Binding-protein-dependent transport system inner membrane component DUF3333 PF11812.8 ORF134835 - 0.06 13.6 0.4 0.06 13.6 0.4 2.5 3 1 0 3 3 3 0 Domain of unknown function (DUF3333) DUF2116 PF09889.9 ORF134835 - 0.16 11.9 2.1 0.74 9.8 0.7 2.5 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2976 PF11190.8 ORF134835 - 0.9 9.4 4.2 6.7 6.6 0.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2976) TPR_1 PF00515.28 ORF129931 - 0.0011 18.8 0.1 0.0029 17.4 0.1 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF129931 - 0.0094 16.1 0.6 0.3 11.4 0.1 3.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF129931 - 0.027 14.6 0.7 0.099 12.8 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF129931 - 0.048 13.5 0.1 0.72 9.8 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TRP PF06011.12 ORF126812 - 7.5e-09 34.8 5.3 1.1e-08 34.3 5.3 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Ion_trans PF00520.31 ORF120423 - 2.3e-22 79.4 7.5 3.8e-22 78.7 7.5 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF120423 - 3.2e-09 36.6 6.8 3.2e-09 36.6 6.8 2.0 2 0 0 2 2 2 1 Ion channel EF-hand_1 PF00036.32 ORF120423 - 0.00011 21.4 0.2 0.0006 19.2 0.2 2.3 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF120423 - 0.00016 21.5 0.1 0.00041 20.1 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF120423 - 0.00058 20.3 0.1 0.0013 19.1 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF120423 - 0.00067 19.4 0.1 0.023 14.6 0.0 2.6 2 0 0 2 2 2 1 EF-hand domain PKD_channel PF08016.12 ORF120423 - 0.0012 17.6 1.6 0.0019 17.0 1.6 1.3 1 0 0 1 1 1 1 Polycystin cation channel EF-hand_5 PF13202.6 ORF120423 - 0.056 13.0 0.0 0.13 11.8 0.0 1.7 1 0 0 1 1 1 0 EF hand MaoC_dehydrat_N PF13452.6 ORF120423 - 0.1 12.7 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 N-terminal half of MaoC dehydratase DUF2975 PF11188.8 ORF120423 - 5.2 7.0 6.8 11 5.8 5.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2975) DUF4203 PF13886.6 ORF110683 - 2e-21 76.6 41.8 2.7e-21 76.1 41.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) CDC45 PF02724.14 NODE_9885_length_1381_cov_74.835810_g7274_i0reverse_frame_3 - 0.057 11.7 5.6 0.075 11.3 5.6 1.1 1 0 0 1 1 1 0 CDC45-like protein Oxysterol_BP PF01237.18 ORF93245 - 5.5e-31 107.7 0.1 8.6e-31 107.1 0.1 1.2 1 0 0 1 1 1 1 Oxysterol-binding protein ApoLp-III PF07464.11 ORF92408 - 2.6e-05 24.4 3.3 0.016 15.3 0.0 3.3 1 1 2 3 3 3 2 Apolipophorin-III precursor (apoLp-III) MORN PF02493.20 ORF92408 - 0.0086 15.9 12.1 0.3 11.0 1.0 3.5 3 0 0 3 3 3 2 MORN repeat Mer2 PF09074.10 ORF92408 - 0.06 13.2 11.5 0.02 14.7 4.2 2.5 1 1 1 2 2 2 0 Mer2 Fib_alpha PF08702.10 ORF92408 - 8 6.6 10.2 5.9 7.1 0.4 3.0 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family ATP-synt_ab PF00006.25 ORF8916 - 1.3e-63 214.5 0.0 1.8e-63 214.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 ORF8916 - 1.2e-20 73.7 2.5 2.8e-20 72.6 2.5 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain T3SS_ATPase_C PF18269.1 ORF8916 - 0.017 15.0 0.4 0.1 12.5 0.4 2.1 1 1 0 1 1 1 0 T3SS EscN ATPase C-terminal domain MCM PF00493.23 ORF82475 - 2.4e-72 242.6 0.1 3.3e-72 242.2 0.1 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 ORF82475 - 4e-21 75.2 2.6 7.7e-21 74.3 2.6 1.5 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 ORF82475 - 3.6e-08 33.1 0.3 1.1e-07 31.5 0.1 2.0 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 ORF82475 - 7e-05 22.7 0.1 0.0002 21.2 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 ORF82475 - 0.00025 21.5 0.0 0.004 17.6 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 ORF82475 - 0.016 15.1 2.0 0.016 15.1 2.0 2.2 2 0 0 2 2 2 0 AAA lid domain Sigma54_activat PF00158.26 ORF82475 - 0.083 12.6 0.0 0.18 11.5 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Pex14_N PF04695.13 ORF71407 - 0.29 11.8 5.2 4.2 8.0 0.2 2.4 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region FMO-like PF00743.19 ORF6760 - 5.5e-50 170.3 6.4 5.4e-35 120.8 1.0 2.3 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF6760 - 1.6e-12 47.3 1.8 1.4e-07 31.1 0.3 3.2 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF6760 - 1.2e-09 37.8 0.0 2.2e-08 33.7 0.0 2.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF6760 - 2.1e-08 33.7 0.6 1.9e-06 27.3 0.1 2.6 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 ORF6760 - 8.7e-06 25.8 0.0 0.13 12.2 0.0 3.2 3 0 0 3 3 3 2 FAD-NAD(P)-binding DAO PF01266.24 ORF6760 - 7.1e-05 22.5 0.1 0.03 13.9 0.0 3.0 3 0 0 3 3 3 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF6760 - 0.0014 18.8 0.0 0.027 14.7 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 ORF6760 - 0.0016 17.8 0.0 0.087 12.1 0.1 2.3 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Mqo PF06039.15 ORF6760 - 0.073 11.6 0.0 0.2 10.2 0.1 1.7 2 0 0 2 2 2 0 Malate:quinone oxidoreductase (Mqo) HI0933_like PF03486.14 ORF6760 - 0.16 10.6 0.0 12 4.4 0.0 2.3 2 0 0 2 2 2 0 HI0933-like protein Ribonuc_red_lgN PF00317.21 ORF6760 - 0.16 11.9 0.0 0.58 10.2 0.0 1.9 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain Asp PF00026.23 ORF58601 - 1.9e-36 126.1 1.2 2.7e-36 125.6 1.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF58601 - 0.003 17.4 0.0 0.006 16.4 0.0 1.5 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal TAXi_N PF14543.6 ORF58601 - 0.0055 17.0 1.9 0.55 10.5 0.2 3.0 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal ECSCR PF15820.5 ORF58601 - 0.031 14.1 0.0 0.083 12.7 0.0 1.8 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator FAM163 PF15069.6 ORF58601 - 0.06 13.8 3.3 0.12 12.8 3.3 1.4 1 0 0 1 1 1 0 FAM163 family Asp_protease_2 PF13650.6 ORF58601 - 0.065 13.9 0.0 2.1 9.0 0.0 2.8 3 0 0 3 3 3 0 Aspartyl protease DUF3827 PF12877.7 ORF58601 - 0.066 11.6 0.0 0.092 11.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) gag-asp_proteas PF13975.6 ORF58601 - 0.14 12.7 0.0 1.3 9.6 0.0 2.5 3 0 0 3 3 3 0 gag-polyprotein putative aspartyl protease HECT PF00632.25 ORF54893 - 1.7e-76 257.7 0.7 2.3e-76 257.2 0.7 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) NMT1 PF09084.11 ORF54893 - 0.045 13.7 0.0 0.076 12.9 0.0 1.3 1 0 0 1 1 1 0 NMT1/THI5 like Zn-C2H2_12 PF18112.1 ORF54893 - 0.058 13.9 0.1 0.19 12.2 0.1 1.9 1 0 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain Pkinase PF00069.25 ORF45102 - 3.6e-64 216.7 0.0 8e-64 215.5 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45102 - 2.2e-39 135.3 0.0 3.9e-39 134.5 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF45102 - 1.1e-06 28.2 0.0 2.3e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF45102 - 0.001 17.9 0.2 0.0021 16.9 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF45102 - 0.0035 16.4 0.0 0.0074 15.4 0.0 1.5 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 ORF45102 - 0.046 13.6 0.0 0.072 13.0 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF45102 - 0.98 8.3 7.7 1.2 8.0 0.0 2.5 2 1 0 2 2 2 0 Haspin like kinase domain Pkinase PF00069.25 ORF40541 - 3.6e-64 216.7 0.0 8e-64 215.5 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF40541 - 2.2e-39 135.3 0.0 3.9e-39 134.5 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF40541 - 1.1e-06 28.2 0.0 2.3e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF40541 - 0.001 17.9 0.2 0.0021 16.9 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF40541 - 0.0035 16.4 0.0 0.0074 15.4 0.0 1.5 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 ORF40541 - 0.046 13.6 0.0 0.072 13.0 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF40541 - 0.98 8.3 7.7 1.2 8.0 0.0 2.5 2 1 0 2 2 2 0 Haspin like kinase domain MFS_2 PF13347.6 ORF35107 - 3.1e-31 108.4 27.0 4.5e-31 107.9 27.0 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein Exonuc_VII_L PF02601.15 ORF32229 - 0.27 10.8 24.6 0.033 13.8 19.3 2.0 1 1 1 2 2 2 0 Exonuclease VII, large subunit UPF0242 PF06785.11 ORF32229 - 1.4 9.0 34.7 0.086 12.9 27.8 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus LtuB PF17455.2 ORF32229 - 2.4 8.8 5.7 2.4 8.8 2.7 2.5 2 0 0 2 2 2 0 Late transcription unit B HTH_Tnp_Tc5 PF03221.16 ORF31417 - 1.3e-15 57.1 0.1 3.6e-15 55.7 0.1 1.8 1 0 0 1 1 1 1 Tc5 transposase DNA-binding domain Asp PF00026.23 ORF26234 - 1.9e-36 126.1 1.2 2.7e-36 125.6 1.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF26234 - 0.003 17.4 0.0 0.006 16.4 0.0 1.5 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal TAXi_N PF14543.6 ORF26234 - 0.0055 17.0 1.9 0.55 10.5 0.2 3.0 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal ECSCR PF15820.5 ORF26234 - 0.031 14.1 0.0 0.083 12.7 0.0 1.8 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator FAM163 PF15069.6 ORF26234 - 0.06 13.8 3.3 0.12 12.8 3.3 1.4 1 0 0 1 1 1 0 FAM163 family Asp_protease_2 PF13650.6 ORF26234 - 0.065 13.9 0.0 2.1 9.0 0.0 2.8 3 0 0 3 3 3 0 Aspartyl protease DUF3827 PF12877.7 ORF26234 - 0.066 11.6 0.0 0.092 11.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) gag-asp_proteas PF13975.6 ORF26234 - 0.14 12.7 0.0 1.3 9.6 0.0 2.5 3 0 0 3 3 3 0 gag-polyprotein putative aspartyl protease COX1 PF00115.20 ORF20437 - 2.4e-90 303.5 44.1 2.7e-90 303.3 44.1 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Chloroa_b-bind PF00504.21 ORF150482 - 1.2e-65 221.0 0.7 1.4e-32 113.5 0.0 2.3 2 0 0 2 2 2 2 Chlorophyll A-B binding protein OMPdecase PF00215.24 ORF150482 - 0.026 14.1 0.0 0.052 13.1 0.0 1.5 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family BtrH_N PF14399.6 ORF150482 - 0.039 14.2 0.0 18 5.6 0.0 3.5 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal eIF-3_zeta PF05091.12 ORF143744 - 7.3 5.4 9.7 10 5.0 9.7 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) TraI PF07057.11 ORF143351 - 0.026 14.7 0.4 0.079 13.1 0.4 1.8 1 0 0 1 1 1 0 DNA helicase TraI Glyco_transf_24 PF18404.1 ORF141857 - 1.1e-123 411.9 4.5 2.3e-62 210.8 0.6 2.0 1 1 0 2 2 2 2 Glucosyltransferase 24 Glyco_transf_8 PF01501.20 ORF141857 - 1.8e-09 37.5 0.0 3.2e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 8 Pkinase PF00069.25 ORF137026 - 7e-66 222.3 0.0 1.3e-65 221.5 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF137026 - 2.7e-45 154.7 0.0 5.2e-45 153.7 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase Choline_kinase PF01633.20 ORF137026 - 0.0056 16.3 0.0 0.011 15.3 0.0 1.7 1 1 0 1 1 1 1 Choline/ethanolamine kinase Kinase-like PF14531.6 ORF137026 - 0.0081 15.5 0.0 0.014 14.7 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF137026 - 0.0098 14.9 2.2 0.017 14.1 2.2 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF137026 - 0.015 14.7 0.0 0.032 13.6 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family V_ATPase_I PF01496.19 ORF129873 - 0.065 11.1 1.3 0.091 10.7 1.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Thioredoxin_3 PF13192.6 ORF129873 - 0.09 12.8 1.7 0.23 11.5 0.0 2.4 2 0 0 2 2 2 0 Thioredoxin domain Uds1 PF15456.6 ORF129873 - 0.18 11.9 8.5 0.5 10.5 8.5 1.7 1 0 0 1 1 1 0 Up-regulated During Septation HAUS6_N PF14661.6 ORF129873 - 0.2 11.2 2.4 0.31 10.6 2.4 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Selenoprotein_S PF06936.11 ORF129873 - 0.37 10.6 3.5 0.65 9.8 3.5 1.3 1 0 0 1 1 1 0 Selenoprotein S (SelS) PKcGMP_CC PF16808.5 ORF129873 - 1.1 9.1 5.4 2.7 7.9 5.4 1.6 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase AAA_23 PF13476.6 ORF129873 - 1.3 9.5 7.5 2.4 8.6 7.5 1.4 1 0 0 1 1 1 0 AAA domain Prominin PF05478.11 ORF129873 - 3.2 5.6 4.1 4.2 5.2 4.1 1.1 1 0 0 1 1 1 0 Prominin Kinesin PF00225.23 ORF11861 - 6.3e-71 239.0 1.7 9.6e-71 238.4 1.7 1.2 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF11861 - 8.4e-05 22.5 1.0 0.00075 19.5 0.0 2.3 2 0 0 2 2 2 1 Microtubule binding WHEP-TRS PF00458.20 ORF11861 - 0.027 14.6 1.7 0.08 13.1 1.7 1.8 1 0 0 1 1 1 0 WHEP-TRS domain Senescence_reg PF04520.13 ORF11861 - 0.044 14.6 0.3 0.083 13.7 0.3 1.5 1 0 0 1 1 1 0 Senescence regulator Pkinase PF00069.25 ORF111018 - 5.2e-52 176.8 0.1 8.1e-52 176.2 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF111018 - 2.7e-41 141.6 0.0 4.4e-41 140.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF111018 - 3.4e-08 33.2 0.0 1.2e-07 31.4 0.0 1.9 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF111018 - 0.0013 17.6 0.0 0.0069 15.2 0.0 1.9 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF111018 - 0.0048 16.3 0.0 0.0093 15.3 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF111018 - 0.0097 15.5 0.1 0.023 14.3 0.1 1.6 1 0 0 1 1 1 1 RIO1 family Haspin_kinase PF12330.8 ORF111018 - 0.023 13.7 0.1 0.052 12.5 0.1 1.6 1 0 0 1 1 1 0 Haspin like kinase domain ApbE PF02424.15 ORF9617 - 0.17 11.4 0.2 0.53 9.8 0.1 1.8 1 1 1 2 2 2 0 ApbE family MORN PF02493.20 ORF86907 - 1.1e-46 154.0 81.0 1.9e-06 27.4 3.2 10.6 10 0 0 10 10 10 10 MORN repeat COMMD1_N PF17221.3 ORF86907 - 0.057 13.7 0.1 0.11 12.8 0.1 1.4 1 0 0 1 1 1 0 COMMD1 N-terminal domain HTH_Tnp_Tc5 PF03221.16 ORF86204 - 1.4e-15 57.1 0.1 3.6e-15 55.7 0.1 1.8 1 0 0 1 1 1 1 Tc5 transposase DNA-binding domain DUF21 PF01595.20 ORF81102 - 4.8e-37 127.3 2.0 8.3e-37 126.6 2.0 1.3 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 ORF81102 - 2e-08 34.6 1.3 0.0028 18.1 0.1 2.7 2 0 0 2 2 2 2 CBS domain Deltameth_res PF16020.5 ORF81102 - 0.45 10.4 2.5 21 5.1 0.0 3.4 3 0 0 3 3 3 0 Deltamethrin resistance zf-C2H2_2 PF12756.7 ORF71274 - 6.6e-27 93.8 29.4 1.7e-21 76.4 9.1 4.4 3 1 1 4 4 4 3 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 ORF71274 - 1.7e-07 31.3 27.0 2.3e-05 24.6 7.1 4.9 5 0 0 5 5 5 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF71274 - 0.00015 22.0 4.2 0.00015 22.0 4.2 4.3 4 0 0 4 4 4 2 Zinc-finger of C2H2 type AhpC-TSA PF00578.21 ORF71274 - 0.012 15.5 2.3 0.063 13.2 0.0 3.0 2 1 1 3 3 3 0 AhpC/TSA family zf-C2H2_4 PF13894.6 ORF71274 - 2 9.5 25.0 1.5 9.9 0.9 5.2 5 0 0 5 5 5 0 C2H2-type zinc finger OrfB_IS605 PF01385.19 ORF71274 - 4 7.7 8.0 0.18 12.1 1.2 2.2 2 0 0 2 2 2 0 Probable transposase zf-C2H2_6 PF13912.6 ORF71274 - 6.9 6.8 18.0 0.55 10.3 3.4 3.1 3 0 0 3 3 3 0 C2H2-type zinc finger ERGIC_N PF13850.6 ORF50375 - 0.018 15.3 1.4 0.083 13.2 0.3 2.3 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF2254 PF10011.9 ORF50375 - 0.084 11.7 0.0 0.12 11.2 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF4064 PF13273.6 ORF50375 - 0.11 12.8 5.6 1.3 9.3 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) DUF357 PF04010.13 ORF50375 - 0.3 11.2 1.4 5.1 7.2 0.7 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF357) cNMP_binding PF00027.29 ORF5006 - 3e-07 30.4 0.1 1.9e-06 27.8 0.0 2.2 2 1 0 2 2 2 1 Cyclic nucleotide-binding domain zf-C2H2_2 PF12756.7 ORF47287 - 6.6e-27 93.8 29.4 1.7e-21 76.4 9.1 4.4 3 1 1 4 4 4 3 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 ORF47287 - 1.7e-07 31.3 27.0 2.3e-05 24.6 7.1 4.9 5 0 0 5 5 5 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF47287 - 0.00015 22.0 4.2 0.00015 22.0 4.2 4.3 4 0 0 4 4 4 2 Zinc-finger of C2H2 type AhpC-TSA PF00578.21 ORF47287 - 0.012 15.5 2.3 0.063 13.2 0.0 3.0 2 1 1 3 3 3 0 AhpC/TSA family zf-C2H2_4 PF13894.6 ORF47287 - 2 9.5 25.0 1.5 9.9 0.9 5.2 5 0 0 5 5 5 0 C2H2-type zinc finger OrfB_IS605 PF01385.19 ORF47287 - 4 7.7 8.0 0.18 12.1 1.2 2.2 2 0 0 2 2 2 0 Probable transposase zf-C2H2_6 PF13912.6 ORF47287 - 6.9 6.8 18.0 0.55 10.3 3.4 3.1 3 0 0 3 3 3 0 C2H2-type zinc finger Ammonium_transp PF00909.21 ORF32949 - 4.5e-96 322.0 30.7 5.2e-96 321.8 30.7 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Ion_trans PF00520.31 ORF26565 - 7e-25 87.7 16.3 9.8e-25 87.2 16.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF26565 - 3.9e-09 35.7 0.0 0.0047 16.7 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF26565 - 1.4e-08 33.7 0.0 0.0067 15.9 0.2 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF26565 - 1.1e-05 25.7 0.1 0.00038 20.8 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF26565 - 2.8e-05 23.4 0.1 0.063 12.8 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF26565 - 4e-05 23.4 0.3 0.041 13.7 0.2 2.6 2 0 0 2 2 2 2 EF-hand domain pair Gene66 PF02053.15 ORF26565 - 0.13 11.9 0.0 0.24 11.0 0.0 1.4 1 0 0 1 1 1 0 Gene 66 (IR5) protein PKD_channel PF08016.12 ORF26565 - 1 8.0 18.0 3.1 6.4 10.7 2.4 2 1 0 2 2 2 0 Polycystin cation channel PAN_4 PF14295.6 ORF1877 - 0.00025 20.9 3.2 0.00025 20.9 3.2 2.6 2 1 1 3 3 3 1 PAN domain PAN_1 PF00024.26 ORF1877 - 0.0042 17.0 1.9 0.0093 15.9 1.9 1.6 1 0 0 1 1 1 1 PAN domain MORN PF02493.20 ORF16509 - 1.1e-46 154.0 81.0 1.9e-06 27.4 3.2 10.6 10 0 0 10 10 10 10 MORN repeat COMMD1_N PF17221.3 ORF16509 - 0.057 13.7 0.1 0.11 12.8 0.1 1.4 1 0 0 1 1 1 0 COMMD1 N-terminal domain tRNA_U5-meth_tr PF05958.11 ORF144722 - 6.1e-19 68.2 0.0 3.4e-18 65.8 0.0 2.2 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_25 PF13649.6 ORF144722 - 2.3e-08 34.6 0.0 6.2e-08 33.2 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF144722 - 4.7e-08 33.0 0.0 9e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 ORF144722 - 2e-06 27.7 0.0 3e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 ORF144722 - 3e-06 27.0 0.0 5.7e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 ORF144722 - 5.2e-06 26.1 0.0 8.5e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 ORF144722 - 1.2e-05 24.9 0.0 2.5e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 ORF144722 - 4.2e-05 23.4 0.0 7.1e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.12 ORF144722 - 7e-05 23.4 0.0 0.00022 21.8 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain AviRa PF11599.8 ORF144722 - 0.0019 17.7 0.9 0.0026 17.2 0.1 1.7 2 0 0 2 2 2 1 RRNA methyltransferase AviRa N6_N4_Mtase PF01555.18 ORF144722 - 0.0029 17.4 0.0 0.0048 16.6 0.0 1.3 1 0 0 1 1 1 1 DNA methylase Methyltransf_4 PF02390.17 ORF144722 - 0.0035 16.8 0.0 0.0059 16.1 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_23 PF13489.6 ORF144722 - 0.0041 17.0 0.0 0.0061 16.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 ORF144722 - 0.0069 16.0 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase NodS PF05401.11 ORF144722 - 0.017 14.8 0.1 0.034 13.8 0.1 1.4 1 0 0 1 1 1 0 Nodulation protein S (NodS) DUF5590 PF17881.1 ORF144722 - 0.064 13.4 0.4 0.12 12.5 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5590) Ubie_methyltran PF01209.18 ORF144722 - 0.084 12.2 0.0 0.17 11.2 0.0 1.4 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF144722 - 0.15 12.0 0.0 0.3 11.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Myb_DNA-binding PF00249.31 ORF141808 - 6.3e-23 80.7 1.8 1.7e-11 44.1 0.0 2.5 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF141808 - 4.7e-18 65.2 2.9 2.3e-12 47.0 0.5 2.9 1 1 1 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_4 PF13837.6 ORF141808 - 0.002 18.5 6.9 0.003 17.9 0.6 3.5 2 1 1 3 3 3 1 Myb/SANT-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF141808 - 0.027 14.3 0.1 0.027 14.3 0.1 2.7 3 0 0 3 3 3 0 Myb DNA-binding like SLIDE PF09111.10 ORF141808 - 0.071 13.1 0.0 0.071 13.1 0.0 3.2 4 0 0 4 4 4 0 SLIDE DUF3718 PF12514.8 ORF13331 - 0.089 13.0 0.6 2.5 8.3 0.2 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3718) Peripla_BP_5 PF13433.6 ORF131273 - 0.17 10.9 0.1 0.25 10.3 0.1 1.2 1 0 0 1 1 1 0 Periplasmic binding protein domain ADK PF00406.22 ORF104901 - 7.3e-45 152.7 0.0 7e-22 78.2 0.0 2.5 2 1 0 2 2 2 2 Adenylate kinase AAA_17 PF13207.6 ORF104901 - 5.5e-24 85.1 0.0 6.1e-12 46.1 0.0 2.8 2 1 0 2 2 2 2 AAA domain AAA_18 PF13238.6 ORF104901 - 8.3e-10 39.3 0.1 1.3e-07 32.3 0.0 2.8 2 1 0 2 2 2 1 AAA domain Hydin_ADK PF17213.3 ORF104901 - 3e-05 24.4 0.0 0.19 12.0 0.0 3.4 2 1 1 3 3 3 1 Hydin Adenylate kinase-like domain Cytidylate_kin2 PF13189.6 ORF104901 - 0.00075 19.7 0.1 1.7 8.7 0.0 3.6 3 1 0 3 3 3 1 Cytidylate kinase-like family AAA PF00004.29 ORF104901 - 0.0022 18.4 0.0 0.014 15.8 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 ORF104901 - 0.0035 17.5 0.0 0.02 15.1 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF104901 - 0.0085 16.1 0.0 5.9 6.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) DUF5586 PF17824.1 ORF104901 - 0.0087 15.2 0.6 0.016 14.3 0.3 1.6 2 0 0 2 2 2 1 Family of unknown function (DUF5586) SKI PF01202.22 ORF104901 - 0.047 13.8 1.4 0.4 10.8 0.0 3.1 4 0 0 4 4 4 0 Shikimate kinase Methyltransf_8 PF05148.15 ORF104901 - 0.05 13.4 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase dNK PF01712.19 ORF104901 - 0.13 12.1 1.6 2.9 7.7 0.0 2.9 3 0 0 3 3 3 0 Deoxynucleoside kinase DUF5582 PF17819.1 ORF104901 - 0.18 12.3 0.8 0.37 11.3 0.8 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5582) AChE_tetra PF08674.10 ORF104026 - 0.039 13.6 4.6 0.11 12.2 4.6 1.8 1 0 0 1 1 1 0 Acetylcholinesterase tetramerisation domain malic PF00390.19 NODE_10006_length_1373_cov_258.723468_g7367_i0reverse_frame_1 - 3.9e-19 69.2 0.9 1.1e-16 61.2 0.9 2.5 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 NODE_10006_length_1373_cov_258.723468_g7367_i0reverse_frame_1 - 1.2e-17 64.1 0.9 4e-17 62.4 0.9 1.8 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain AdoHcyase_NAD PF00670.21 NODE_10006_length_1373_cov_258.723468_g7367_i0reverse_frame_1 - 0.001 19.1 0.0 0.0044 17.1 0.0 2.0 1 1 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Oxidored_nitro PF00148.19 NODE_10006_length_1373_cov_258.723468_g7367_i0reverse_frame_1 - 0.041 12.6 0.1 0.069 11.9 0.1 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase DUF2604 PF10790.9 NODE_10006_length_1373_cov_258.723468_g7367_i0reverse_frame_1 - 0.085 13.2 0.1 0.2 12.0 0.1 1.6 1 0 0 1 1 1 0 Protein of Unknown function (DUF2604) Malate_DH PF12434.8 NODE_10006_length_1373_cov_258.723468_g7367_i0reverse_frame_1 - 0.1 12.6 0.1 0.25 11.4 0.1 1.6 1 0 0 1 1 1 0 Malate dehydrogenase enzyme APC_r PF05923.12 NODE_10006_length_1373_cov_258.723468_g7367_i0forward_frame_1 - 0.00075 19.2 1.6 0.003 17.3 1.6 2.1 1 0 0 1 1 1 1 APC repeat Metallophos PF00149.28 ORF94906 - 1.9e-14 54.6 1.4 1.9e-14 54.6 1.4 1.5 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF94906 - 0.0032 17.7 0.1 0.083 13.1 0.1 2.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Cob_adeno_trans PF01923.18 ORF73815 - 0.44 10.7 0.9 0.94 9.6 0.9 1.5 1 0 0 1 1 1 0 Cobalamin adenosyltransferase DUF4819 PF16090.5 ORF62560 - 0.18 11.9 0.1 0.33 11.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4819) SMYLE_N PF18615.1 ORF61551 - 0.17 11.4 2.5 0.27 10.8 2.5 1.2 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain UDPGT PF00201.18 ORF55596 - 1.3e-22 80.3 0.1 1.8e-22 79.9 0.1 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF55596 - 2.1e-06 27.8 0.0 3.4e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Sec15 PF04091.12 ORF50888 - 3.8e-05 23.3 1.4 8.3e-05 22.1 1.4 1.6 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DUF445 PF04286.12 ORF50888 - 0.00028 20.8 0.6 0.00047 20.1 0.6 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF445) LRR_6 PF13516.6 ORF50888 - 0.0058 16.6 0.0 0.069 13.2 0.0 2.9 2 0 0 2 2 2 1 Leucine Rich repeat LRR_4 PF12799.7 ORF50888 - 3.2 8.3 7.8 39 4.9 0.4 4.3 3 0 0 3 3 3 0 Leucine Rich repeats (2 copies) Epsilon_antitox PF08998.11 ORF50888 - 5.1 7.4 7.9 24 5.3 0.2 4.0 2 2 1 4 4 4 0 Bacterial epsilon antitoxin PRMT5_C PF17286.2 ORF50787 - 0.1 12.5 0.6 0.97 9.3 0.0 2.6 2 1 0 2 2 2 0 PRMT5 oligomerisation domain Fe_hyd_SSU PF02256.17 ORF50787 - 0.12 12.5 1.6 0.25 11.5 0.4 2.1 2 0 0 2 2 2 0 Iron hydrogenase small subunit Pepsin-I3 PF06394.13 ORF40407 - 0.13 12.5 0.1 0.13 12.5 0.1 2.0 2 0 0 2 2 2 0 Pepsin inhibitor-3-like repeated domain DUF4407 PF14362.6 ORF40407 - 1.8 7.8 14.4 0.28 10.5 10.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) ECH_2 PF16113.5 ORF40407 - 2.1 7.7 5.6 4 6.8 5.6 1.4 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase zf-B_box PF00643.24 ORF40407 - 2.9 8.1 9.2 0.24 11.6 3.6 2.1 2 0 0 2 2 2 0 B-box zinc finger PHD PF00628.29 ORF40407 - 4.8 7.1 9.9 0.52 10.3 2.8 2.6 2 0 0 2 2 2 0 PHD-finger Retrotrans_gag PF03732.17 ORF40407 - 5.2 7.4 16.9 7.8 6.9 5.7 3.6 1 1 2 3 3 3 0 Retrotransposon gag protein Enkurin PF13864.6 ORF40407 - 5.7 7.4 15.4 16 6.0 11.4 2.9 2 0 0 2 2 2 0 Calmodulin-binding TMF_DNA_bd PF12329.8 ORF23403 - 0.0011 18.9 9.6 0.0011 18.9 9.6 5.7 3 1 1 5 5 5 1 TATA element modulatory factor 1 DNA binding TMF_TATA_bd PF12325.8 ORF23403 - 0.0012 19.1 11.9 0.0012 19.1 11.9 4.8 1 1 2 3 3 2 2 TATA element modulatory factor 1 TATA binding Fez1 PF06818.15 ORF23403 - 0.0014 19.1 45.1 0.011 16.2 16.8 3.3 1 1 2 3 3 3 2 Fez1 CBP_BcsR PF10945.8 ORF23403 - 0.033 13.7 0.0 0.12 11.9 0.0 2.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR Fib_alpha PF08702.10 ORF23403 - 0.035 14.3 48.3 0.89 9.7 14.9 4.0 1 1 1 3 3 3 0 Fibrinogen alpha/beta chain family CENP-F_leu_zip PF10473.9 ORF23403 - 0.048 13.7 55.0 0.17 11.9 4.5 5.3 1 1 1 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CALCOCO1 PF07888.11 ORF23403 - 0.14 11.0 48.2 0.43 9.4 4.1 3.5 1 1 2 3 3 3 0 Calcium binding and coiled-coil domain (CALCOCO1) like Spc7 PF08317.11 ORF23403 - 0.19 10.5 51.8 0.074 11.9 19.6 3.3 1 1 3 4 4 4 0 Spc7 kinetochore protein GAS PF13851.6 ORF23403 - 0.27 10.5 55.1 0.26 10.6 16.0 3.3 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding Arch_flagellin PF01917.16 ORF23403 - 0.56 10.4 7.6 0.068 13.3 2.1 2.2 2 0 0 2 2 2 0 Archaebacterial flagellin H_lectin PF09458.10 ORF23403 - 0.77 10.0 2.8 1.4 9.1 0.2 2.6 2 1 0 2 2 2 0 H-type lectin domain ATG16 PF08614.11 ORF23403 - 0.91 9.7 48.8 0.035 14.3 26.6 4.1 3 1 1 4 4 4 0 Autophagy protein 16 (ATG16) Filament PF00038.21 ORF23403 - 1.2 8.6 54.0 3.9 7.0 15.4 3.2 1 1 2 3 3 3 0 Intermediate filament protein FUSC PF04632.12 ORF23403 - 2.4 6.6 4.2 0.99 7.9 1.2 1.7 1 1 0 2 2 2 0 Fusaric acid resistance protein family DUF812 PF05667.11 ORF23403 - 2.6 6.8 54.2 0.62 8.9 14.6 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Atg14 PF10186.9 ORF23403 - 3 6.8 38.5 4.6 6.2 16.2 3.1 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3584 PF12128.8 ORF23403 - 4.9 4.5 49.1 0.5 7.8 40.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) WEMBL PF05701.11 ORF23403 - 5.9 5.4 44.8 21 3.6 22.5 2.6 1 1 1 2 2 2 0 Weak chloroplast movement under blue light SHE3 PF17078.5 ORF23403 - 6.5 6.4 53.4 0.88 9.2 11.4 3.6 1 1 1 3 3 3 0 SWI5-dependent HO expression protein 3 AAA_13 PF13166.6 ORF23403 - 7.1 5.1 48.7 1.2 7.7 6.3 3.0 1 1 2 3 3 3 0 AAA domain DUF948 PF06103.11 ORF23403 - 7.7 6.8 29.1 7.4 6.9 5.5 5.4 2 1 2 5 5 5 0 Bacterial protein of unknown function (DUF948) Chloroa_b-bind PF00504.21 ORF20558 - 1.1e-65 221.0 0.7 1.4e-32 113.5 0.0 2.3 2 0 0 2 2 2 2 Chlorophyll A-B binding protein OMPdecase PF00215.24 ORF20558 - 0.026 14.1 0.0 0.052 13.1 0.0 1.5 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family BtrH_N PF14399.6 ORF20558 - 0.038 14.2 0.0 18 5.6 0.0 3.5 4 0 0 4 4 4 0 Butirosin biosynthesis protein H, N-terminal EGF_MSP1_1 PF12946.7 ORF16950 - 0.048 13.7 0.7 0.12 12.5 0.1 2.0 2 0 0 2 2 2 0 MSP1 EGF domain 1 Pkinase PF00069.25 ORF146891 - 4e-47 160.8 1.8 4.1e-47 160.8 0.3 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF146891 - 9.5e-22 77.5 0.0 1.8e-21 76.6 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF146891 - 2.2e-06 27.2 0.2 7.6e-06 25.4 0.0 2.0 3 0 0 3 3 3 1 Kinase-like Haspin_kinase PF12330.8 ORF146891 - 0.0019 17.2 0.1 0.0036 16.3 0.1 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF146891 - 0.002 17.0 0.0 0.0036 16.1 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF146891 - 0.011 15.0 0.0 0.025 14.0 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Phage_connect_1 PF05135.13 ORF146891 - 0.085 13.4 1.9 0.98 10.0 0.3 2.6 2 0 0 2 2 2 0 Phage gp6-like head-tail connector protein APH PF01636.23 ORF146891 - 0.21 11.5 0.0 0.42 10.5 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family p450 PF00067.22 ORF143836 - 7.9e-53 179.8 0.3 1.1e-52 179.4 0.3 1.1 1 0 0 1 1 1 1 Cytochrome P450 Pkinase PF00069.25 ORF126086 - 7.8e-58 195.9 0.0 1.3e-57 195.2 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF126086 - 2.7e-27 95.7 0.1 1.2e-26 93.6 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF126086 - 2e-06 27.3 0.0 1.9e-05 24.2 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF126086 - 0.00058 18.9 0.0 0.001 18.1 0.0 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF126086 - 0.00083 18.8 0.0 0.0014 18.1 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF126086 - 0.0024 17.8 0.0 0.0039 17.2 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family PPR_long PF17177.4 ORF126086 - 0.11 11.8 0.1 0.19 11.1 0.1 1.3 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP zf-UBP PF02148.19 ORF121178 - 3.2e-13 49.8 2.4 7.4e-13 48.6 2.4 1.6 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein SIR2 PF02146.17 ORF121178 - 1.4e-08 34.9 0.5 0.0001 22.3 0.0 3.0 2 1 1 3 3 3 2 Sir2 family Enolase_C PF00113.22 ORF121123 - 7.8e-143 475.1 0.1 1e-142 474.7 0.1 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 ORF121123 - 2.7e-52 176.4 0.1 5.3e-52 175.4 0.1 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 ORF121123 - 3.4e-06 26.8 0.0 6e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 ORF121123 - 0.00011 21.4 0.0 0.00023 20.4 0.0 1.4 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus Tyrosinase PF00264.20 ORF117168 - 4.5e-20 72.9 8.3 4.9e-19 69.5 6.9 2.5 2 1 0 2 2 2 1 Common central domain of tyrosinase Photo_RC PF00124.19 ORF107485 - 1.4e-84 283.4 16.1 1.7e-84 283.1 16.1 1.1 1 0 0 1 1 1 1 Photosynthetic reaction centre protein DUF4055 PF13264.6 NODE_10046_length_1371_cov_245.056886_g7403_i0reverse_frame_1 - 0.27 11.4 11.8 0.11 12.7 2.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4055) MFS_1 PF07690.16 ORF92551 - 3.2e-32 111.8 23.4 2.5e-25 89.2 20.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF92551 - 0.0034 15.8 2.2 0.0034 15.8 2.2 2.2 2 1 1 3 3 3 2 Transmembrane secretion effector Phospholip_B PF04916.13 ORF87703 - 2.1e-130 435.8 0.3 2.4e-130 435.6 0.3 1.0 1 0 0 1 1 1 1 Phospholipase B Sugar_tr PF00083.24 ORF87522 - 4.2e-73 246.7 20.7 5e-73 246.5 20.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF87522 - 1.1e-21 77.1 17.4 1.1e-21 77.1 17.4 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 ORF87522 - 0.00011 20.7 0.1 0.00011 20.7 0.1 2.0 2 1 1 3 3 3 1 Organic Anion Transporter Polypeptide (OATP) family DUF1617 PF07761.12 ORF86583 - 0.057 13.5 2.6 0.072 13.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1617) Shisa PF13908.6 ORF76922 - 1.2e-07 32.2 12.9 1.2e-07 32.2 12.9 4.1 2 1 2 4 4 2 1 Wnt and FGF inhibitory regulator Podoplanin PF05808.11 ORF76922 - 2.9e-06 27.5 1.9 6.9e-06 26.3 1.9 1.6 1 0 0 1 1 1 1 Podoplanin WBP-1 PF11669.8 ORF76922 - 0.00037 21.1 4.0 0.00037 21.1 4.0 3.1 3 0 0 3 3 3 1 WW domain-binding protein 1 EphA2_TM PF14575.6 ORF76922 - 0.00091 20.1 0.8 0.004 18.0 0.4 2.3 2 0 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain TMEM52 PF14979.6 ORF76922 - 0.0024 17.8 3.8 0.0088 16.0 2.0 2.3 2 0 0 2 2 2 1 Transmembrane 52 FAM163 PF15069.6 ORF76922 - 0.0053 17.2 3.6 0.0053 17.2 3.6 2.5 2 1 0 2 2 1 1 FAM163 family Prominin PF05478.11 ORF76922 - 0.02 12.9 5.2 0.028 12.4 5.2 1.1 1 0 0 1 1 1 0 Prominin TMEM154 PF15102.6 ORF76922 - 0.023 14.6 0.4 0.05 13.5 0.4 1.6 1 0 0 1 1 1 0 TMEM154 protein family TMIE PF16038.5 ORF76922 - 0.038 13.8 8.0 0.1 12.4 8.0 1.7 1 0 0 1 1 1 0 TMIE protein Orthoreo_P10 PF07204.11 ORF76922 - 0.052 13.5 2.2 0.13 12.2 2.2 1.6 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 Tweety PF04906.13 ORF76922 - 0.053 12.2 1.3 0.095 11.4 1.3 1.3 1 0 0 1 1 1 0 Tweety Rax2 PF12768.7 ORF76922 - 0.066 12.7 0.0 0.13 11.7 0.0 1.6 1 1 0 1 1 1 0 Cortical protein marker for cell polarity Mid2 PF04478.12 ORF76922 - 0.069 13.0 4.6 0.17 11.7 4.6 1.6 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor ECSCR PF15820.5 ORF76922 - 0.08 12.8 0.9 0.18 11.6 0.9 1.6 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Lin-8 PF03353.15 ORF76922 - 0.092 12.3 0.3 0.13 11.7 0.3 1.2 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Comm PF15957.5 ORF76922 - 0.93 9.9 6.5 0.13 12.6 0.6 2.2 2 0 0 2 2 2 0 Commissureless Trypan_PARP PF05887.11 ORF76922 - 1.2 9.1 22.1 2.2 8.3 22.1 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Baculo_11_kDa PF06143.11 ORF76922 - 1.2 8.7 3.7 4 7.1 3.7 1.9 1 0 0 1 1 1 0 Baculovirus 11 kDa family Bestrophin PF01062.21 ORF70110 - 9e-18 64.7 0.4 1.3e-17 64.1 0.4 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel p450 PF00067.22 ORF6937 - 4.8e-58 197.0 0.0 6e-58 196.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Pkinase PF00069.25 ORF57584 - 4.6e-65 219.6 0.0 7.1e-65 219.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57584 - 5.3e-27 94.7 0.0 1.9e-26 92.9 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF57584 - 2.7e-06 26.6 0.1 2.7e-06 26.6 0.1 1.4 2 0 0 2 2 2 1 Haspin like kinase domain RIO1 PF01163.22 ORF57584 - 0.0029 17.2 0.2 0.0058 16.3 0.2 1.5 1 0 0 1 1 1 1 RIO1 family Rax2 PF12768.7 ORF57584 - 0.016 14.7 0.0 0.03 13.8 0.0 1.4 1 0 0 1 1 1 0 Cortical protein marker for cell polarity DUF4834 PF16118.5 ORF5724 - 0.00074 20.4 1.1 0.0027 18.6 0.4 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4834) ATG27 PF09451.10 ORF5724 - 0.0092 15.9 0.6 0.028 14.3 0.1 2.1 2 0 0 2 2 2 1 Autophagy-related protein 27 DNA_pol3_a_NI PF14480.6 ORF5724 - 0.019 14.9 0.0 0.058 13.4 0.0 1.8 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus I Aconitase_C PF00694.19 ORF5724 - 0.028 14.8 0.7 0.055 13.8 0.7 1.5 1 0 0 1 1 1 0 Aconitase C-terminal domain SID-1_RNA_chan PF13965.6 ORF5724 - 0.049 12.0 2.1 0.037 12.4 0.5 1.5 2 0 0 2 2 2 0 dsRNA-gated channel SID-1 PX PF00787.24 ORF40193 - 1.4e-12 47.6 0.0 4.5e-12 46.0 0.0 1.9 1 0 0 1 1 1 1 PX domain Tropomyosin_1 PF12718.7 ORF40193 - 0.0037 17.4 0.4 0.0037 17.4 0.4 2.1 2 0 0 2 2 2 1 Tropomyosin like Seryl_tRNA_N PF02403.22 ORF40193 - 0.045 14.0 0.8 0.045 14.0 0.8 2.1 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain XhlA PF10779.9 ORF40193 - 0.052 13.7 0.7 0.55 10.5 0.6 2.4 2 0 0 2 2 2 0 Haemolysin XhlA CC2-LZ PF16516.5 ORF40193 - 0.057 13.8 2.6 0.45 10.9 0.3 2.6 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Syntaxin-18_N PF10496.9 ORF40193 - 0.085 13.1 4.0 0.12 12.7 1.4 2.3 2 0 0 2 2 2 0 SNARE-complex protein Syntaxin-18 N-terminus DUF4164 PF13747.6 ORF40193 - 0.67 10.3 3.7 1.1 9.6 0.5 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4164) BLOC1_2 PF10046.9 ORF40193 - 1.5 9.1 6.0 2.4 8.5 0.3 3.3 3 1 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Macro PF01661.21 ORF39391 - 3.2e-30 104.6 0.1 3.2e-30 104.6 0.1 2.4 3 0 0 3 3 3 1 Macro domain OmpH PF03938.14 ORF39391 - 0.007 16.7 10.5 0.007 16.7 10.5 4.1 2 1 2 4 4 4 1 Outer membrane protein (OmpH-like) DUF4175 PF13779.6 ORF39391 - 1.8 6.4 7.7 2.7 5.8 7.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) SpecificRecomb PF10136.9 ORF39391 - 6.9 4.9 7.2 7.3 4.8 5.2 1.9 2 0 0 2 2 2 0 Site-specific recombinase Radical_SAM PF04055.21 ORF30761 - 3.5e-18 66.5 0.0 5.5e-18 65.9 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily HemN_C PF06969.16 ORF30761 - 1.8e-08 34.3 0.0 9.6e-08 32.0 0.0 2.4 2 0 0 2 2 2 1 HemN C-terminal domain Mur_ligase PF01225.25 ORF29268 - 1.5e-20 73.3 0.0 5.2e-20 71.6 0.0 1.9 2 0 0 2 2 2 1 Mur ligase family, catalytic domain Mur_ligase_M PF08245.12 ORF29268 - 2.1e-18 67.0 0.0 2.8e-18 66.6 0.0 1.2 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 ORF29268 - 2e-10 40.8 0.0 8.1e-10 38.8 0.0 2.0 3 0 0 3 3 3 1 Mur ligase family, glutamate ligase domain p450 PF00067.22 ORF28166 - 4.8e-58 197.0 0.0 6e-58 196.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Beta_helix PF13229.6 ORF14927 - 6.9e-06 26.0 0.1 6.9e-06 26.0 0.1 2.4 2 0 0 2 2 2 1 Right handed beta helix region DUF229 PF02995.17 ORF142171 - 4.6e-30 104.7 15.3 1.7e-22 79.7 11.1 2.4 2 1 0 2 2 2 2 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF142171 - 1.9e-08 34.1 0.3 1.5e-07 31.1 0.1 2.0 1 1 0 2 2 2 1 Sulfatase Phosphodiest PF01663.22 ORF142171 - 0.0021 17.7 0.0 0.0033 17.1 0.0 1.4 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase LPD11 PF18824.1 ORF142171 - 0.065 13.3 0.1 17 5.6 0.0 3.0 3 0 0 3 3 3 0 Large polyvalent protein-associated domain 11 Ribosomal_L17 PF01196.19 ORF142171 - 0.1 13.5 0.2 0.32 11.9 0.2 1.7 1 1 1 2 2 2 0 Ribosomal protein L17 DUF1501 PF07394.12 ORF142171 - 0.14 11.1 0.0 0.23 10.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) Tubulin PF00091.25 ORF137985 - 9.9e-41 140.1 0.0 6.2e-38 131.0 0.0 2.4 2 0 0 2 2 2 2 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF137985 - 1.4e-17 64.1 0.0 2.8e-17 63.1 0.0 1.5 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_2 PF13809.6 ORF137985 - 0.036 13.3 0.0 1.8 7.7 0.0 2.2 2 0 0 2 2 2 0 Tubulin like DUF3492 PF11997.8 ORF137985 - 0.19 11.5 0.7 0.62 9.8 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF3492) IPT PF01745.16 ORF137985 - 0.22 10.9 0.3 27 4.0 0.0 2.7 2 1 1 3 3 3 0 Isopentenyl transferase PIG-X PF08320.12 ORF136871 - 0.075 12.9 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 PIG-X / PBN1 His_Phos_2 PF00328.22 ORF133097 - 1.2e-11 44.6 1.2 2.7e-10 40.1 0.2 2.7 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 2) HNOB PF07700.15 ORF133097 - 0.031 14.2 0.7 0.066 13.2 0.7 1.5 1 0 0 1 1 1 0 Haem-NO-binding Pkinase PF00069.25 ORF130294 - 4.6e-65 219.6 0.0 7.1e-65 219.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF130294 - 5.3e-27 94.7 0.0 1.9e-26 92.9 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF130294 - 2.7e-06 26.6 0.1 2.7e-06 26.6 0.1 1.4 2 0 0 2 2 2 1 Haspin like kinase domain RIO1 PF01163.22 ORF130294 - 0.0029 17.2 0.2 0.0058 16.3 0.2 1.5 1 0 0 1 1 1 1 RIO1 family Rax2 PF12768.7 ORF130294 - 0.016 14.7 0.0 0.03 13.8 0.0 1.4 1 0 0 1 1 1 0 Cortical protein marker for cell polarity EGF_MSP1_1 PF12946.7 ORF122735 - 0.052 13.6 0.7 0.12 12.5 0.1 1.9 2 0 0 2 2 2 0 MSP1 EGF domain 1 BPD_transp_2 PF02653.16 ORF10954 - 1.1e-42 146.0 43.6 1.1e-42 146.0 43.6 1.4 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component ABC_tran PF00005.27 ORF10954 - 1.6e-06 28.7 0.0 3.1e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter MFS_1 PF07690.16 ORF107721 - 2.7e-33 115.3 22.4 1.8e-25 89.6 20.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF107721 - 0.0034 15.8 2.2 0.0034 15.8 2.2 2.2 2 1 1 3 3 3 2 Transmembrane secretion effector Pkinase PF00069.25 ORF104286 - 4.6e-65 219.6 0.0 7.1e-65 219.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF104286 - 5.3e-27 94.7 0.0 1.9e-26 92.9 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF104286 - 2.7e-06 26.6 0.1 2.7e-06 26.6 0.1 1.4 2 0 0 2 2 2 1 Haspin like kinase domain RIO1 PF01163.22 ORF104286 - 0.0029 17.2 0.2 0.0058 16.3 0.2 1.5 1 0 0 1 1 1 1 RIO1 family Rax2 PF12768.7 ORF104286 - 0.016 14.7 0.0 0.03 13.8 0.0 1.4 1 0 0 1 1 1 0 Cortical protein marker for cell polarity MFS_1 PF07690.16 ORF10406 - 2.4e-31 108.9 26.9 1.6e-25 89.8 19.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF10406 - 0.0034 15.8 2.2 0.0034 15.8 2.2 2.2 2 1 1 3 3 3 2 Transmembrane secretion effector Asp PF00026.23 ORF96708 - 3.6e-47 161.3 8.4 4.3e-47 161.1 8.4 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF96708 - 1.8e-07 31.6 2.6 2.4e-05 24.7 1.1 2.2 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 ORF96708 - 0.026 15.2 0.1 0.39 11.4 0.1 2.8 2 1 0 2 2 2 0 Aspartyl protease GDI PF00996.18 ORF96418 - 1.1e-199 663.4 0.0 1.3e-199 663.2 0.0 1.0 1 0 0 1 1 1 1 GDP dissociation inhibitor Chloroa_b-bind PF00504.21 ORF9168 - 1e-66 224.4 0.2 5e-33 114.9 0.0 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks26.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks26.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks26.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks26.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MORN PF02493.20 NODE_56622_length_300_cov_1309.305660_g48684_i0forward_frame_3 - 2.1e-18 65.0 18.6 2.2e-07 30.4 1.7 3.6 4 0 0 4 4 4 3 MORN repeat zf-P11 PF03854.14 NODE_56620_length_300_cov_6264.596226_g48682_i0reverse_frame_2 - 0.085 12.5 1.1 0.085 12.5 1.1 1.6 2 0 0 2 2 2 0 P-11 zinc finger Importin_rep_3 PF18806.1 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_3 - 0.016 15.3 1.0 1.1 9.3 0.2 2.6 2 1 0 2 2 2 0 Importin 13 repeat Ten1_2 PF15490.6 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_3 - 0.033 13.9 2.5 3.9 7.2 0.2 2.1 1 1 0 2 2 2 0 Telomere-capping, CST complex subunit DUF1308 PF07000.11 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_3 - 0.13 12.1 0.1 1.5 8.7 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1308) HTH_17 PF12728.7 NODE_56619_length_300_cov_8233.116981_g48681_i0reverse_frame_2 - 0.00058 20.0 0.1 0.00096 19.3 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain rOmpB PF12334.8 NODE_56619_length_300_cov_8233.116981_g48681_i0forward_frame_2 - 0.0072 15.8 0.1 3.2 7.2 0.0 2.1 2 0 0 2 2 2 2 Rickettsia outer membrane protein B zf-TRAF PF02176.18 NODE_56618_length_300_cov_72673.581132_g48680_i0reverse_frame_2 - 0.09 13.5 3.1 0.17 12.6 1.6 2.0 1 1 1 2 2 2 0 TRAF-type zinc finger NapE PF06796.11 NODE_56617_length_300_cov_72682.732075_g48679_i0forward_frame_2 - 6 6.5 9.9 2.7 7.6 0.6 2.3 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE DUF4029 PF13221.6 ORF99252 - 0.0061 17.2 0.8 0.0089 16.7 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4029) TED_complement PF07678.14 ORF98047 - 0.046 12.8 0.0 0.052 12.6 0.0 1.1 1 0 0 1 1 1 0 A-macroglobulin TED domain Sel_put PF04328.13 ORF9804 - 0.43 10.6 11.9 0.66 10.1 1.6 2.2 1 1 0 2 2 2 0 Selenoprotein, putative Phe_ZIP PF08916.11 ORF9804 - 0.53 11.0 5.7 6.7 7.5 1.7 2.2 2 0 0 2 2 2 0 Phenylalanine zipper SWIRM-assoc_1 PF16495.5 ORF97464 - 0.27 11.2 8.5 0.45 10.5 8.5 1.3 1 0 0 1 1 1 0 SWIRM-associated region 1 Bac_rhodopsin PF01036.18 ORF97177 - 0.041 13.5 1.9 0.067 12.7 1.9 1.4 1 1 0 1 1 1 0 Bacteriorhodopsin-like protein Coilin_N PF15862.5 ORF96490 - 6.9 6.5 10.4 9.1 6.1 10.4 1.2 1 0 0 1 1 1 0 Coilin N-terminus Spore_coat_CotO PF14153.6 ORF96490 - 7.1 6.5 16.3 8.3 6.3 16.3 1.1 1 0 0 1 1 1 0 Spore coat protein CotO Pkinase PF00069.25 ORF96385 - 6.3e-05 22.5 0.0 7.9e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF4217 PF13959.6 ORF96385 - 0.069 13.4 0.1 0.098 12.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4217) Pkinase_Tyr PF07714.17 ORF96385 - 0.11 11.8 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase DUF2854 PF11016.8 ORF96268 - 0.03 14.2 0.5 0.034 14.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) RXLR PF16810.5 ORF96268 - 0.11 13.0 4.7 0.14 12.6 4.7 1.1 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity Ribosomal_L30 PF00327.20 ORF96268 - 1.7 8.6 18.4 0.87 9.5 0.8 3.5 1 1 2 3 3 3 0 Ribosomal protein L30p/L7e Sid-5 PF17204.3 ORF95885 - 4.3 7.6 8.2 0.27 11.4 0.9 2.2 1 1 2 3 3 3 0 Sid-5 family La PF05383.17 ORF95563 - 2.5e-21 75.5 1.5 4.3e-21 74.7 1.5 1.4 1 0 0 1 1 1 1 La domain DUF45 PF01863.17 ORF95563 - 0.1 12.7 0.4 0.1 12.6 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF45 Antimicrobial_6 PF08036.11 ORF94725 - 0.095 12.8 0.7 0.16 12.1 0.7 1.4 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide Keratin_assoc PF09775.9 ORF94518 - 0.014 15.0 7.0 0.018 14.7 7.0 1.1 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 DUF929 PF06053.11 ORF94052 - 0.022 14.1 2.0 0.026 13.8 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF929) EphA2_TM PF14575.6 ORF94052 - 0.14 13.0 1.9 0.18 12.7 1.9 1.3 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF4834 PF16118.5 ORF94052 - 4.2 8.4 5.0 5 8.1 5.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Shisa PF13908.6 ORF94052 - 5.2 7.3 6.8 6.1 7.0 6.8 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator MNE1 PF13762.6 ORF93999 - 0.0076 16.2 0.2 0.015 15.3 0.1 1.5 1 1 0 1 1 1 1 Mitochondrial splicing apparatus component UPF0236 PF06782.11 ORF93999 - 0.036 12.7 0.0 0.038 12.6 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0236) TSP_NTD PF17804.1 ORF93999 - 0.048 13.9 0.2 0.062 13.6 0.2 1.1 1 0 0 1 1 1 0 Tail specific protease N-terminal domain AMPKBI PF04739.15 ORF93999 - 0.52 10.6 2.6 1.8 8.9 2.6 1.8 1 1 0 1 1 1 0 5'-AMP-activated protein kinase beta subunit, interaction domain DUF929 PF06053.11 ORF93700 - 0.022 14.1 2.0 0.026 13.8 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF929) EphA2_TM PF14575.6 ORF93700 - 0.14 13.0 1.9 0.18 12.7 1.9 1.3 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF4834 PF16118.5 ORF93700 - 4.2 8.4 5.0 5 8.1 5.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Shisa PF13908.6 ORF93700 - 5.2 7.3 6.8 6.1 7.0 6.8 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF3318 PF11780.8 ORF93477 - 0.06 13.3 0.0 0.085 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3318) OmpH PF03938.14 ORF93373 - 0.63 10.4 18.2 0.93 9.8 18.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2457 PF10446.9 ORF93373 - 6.6 5.8 17.8 7.5 5.6 17.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF3440 PF11922.8 ORF93260 - 0.028 14.1 0.2 0.03 14.0 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) DUF3278 PF11683.8 ORF92675 - 0.097 12.8 1.8 0.13 12.4 1.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3278) S_2TMBeta PF18153.1 ORF91945 - 0.027 14.3 0.2 0.031 14.1 0.2 1.1 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain OB_NTP_bind PF07717.16 ORF91684 - 0.13 12.7 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 Oligonucleotide/oligosaccharide-binding (OB)-fold GST_C_3 PF14497.6 ORF8994 - 4.5e-12 46.0 0.5 8e-12 45.2 0.5 1.5 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF8994 - 2.2e-05 24.6 0.1 3.6e-05 23.9 0.1 1.4 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF8994 - 0.001 19.0 0.0 0.0015 18.5 0.0 1.4 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Ninjurin PF04923.12 ORF89270 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin PRA1 PF03208.19 ORF88838 - 0.17 11.5 9.5 0.35 10.5 9.5 1.6 1 1 0 1 1 1 0 PRA1 family protein ERbeta_N PF12497.8 ORF88719 - 0.18 11.6 0.4 6.3 6.6 0.1 2.2 1 1 1 2 2 2 0 Estrogen receptor beta bHLH-MYC_N PF14215.6 ORF87866 - 0.033 14.5 0.1 0.039 14.2 0.1 1.1 1 0 0 1 1 1 0 bHLH-MYC and R2R3-MYB transcription factors N-terminal Trp_leader2 PF08056.11 ORF86715 - 2.6 8.1 6.6 0.93 9.5 1.4 2.1 2 0 0 2 2 2 0 Tryptophan operon leader peptide Cyclin_N PF00134.23 ORF8640 - 1.2e-11 44.4 0.2 1.8e-11 43.9 0.2 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain zf_Rg PF17915.1 ORF85886 - 2.7 7.5 0.0 2.7 7.5 0.0 3.1 1 1 2 3 3 3 0 Reverse gyrase zinc finger Med3 PF11593.8 ORF85474 - 0.49 9.5 6.1 0.52 9.4 6.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Clat_adaptor_s PF01217.20 ORF85240 - 0.011 15.7 2.3 0.013 15.4 2.3 1.1 1 0 0 1 1 1 0 Clathrin adaptor complex small chain Ependymin PF00811.18 ORF85047 - 0.032 14.5 1.3 0.056 13.7 1.3 1.5 1 1 0 1 1 1 0 Ependymin YafO_toxin PF13957.6 ORF84829 - 0.0052 16.8 0.7 0.0072 16.4 0.7 1.3 1 0 0 1 1 1 1 Toxin YafO, type II toxin-antitoxin system Lac_bphage_repr PF06543.12 ORF84573 - 0.14 12.2 0.2 0.21 11.6 0.2 1.3 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor HscB_4_cys PF18256.1 ORF84396 - 0.029 14.2 1.6 0.05 13.4 1.6 1.4 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif DUF4441 PF14536.6 ORF83874 - 0.044 14.0 4.9 0.09 13.0 4.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) Phage_sheath_1C PF17482.2 ORF83874 - 0.046 13.7 0.0 0.1 12.6 0.0 1.5 1 1 1 2 2 2 0 Phage tail sheath C-terminal domain PPV_E2_C PF00511.17 ORF83874 - 0.062 13.5 0.0 0.08 13.1 0.0 1.3 1 0 0 1 1 1 0 E2 (early) protein, C terminal DUF4280 PF14107.6 ORF83636 - 2.3 9.1 5.9 2 9.3 3.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4280) DUF5600 PF18150.1 ORF81251 - 0.035 14.7 0.0 0.043 14.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5600) ARL2_Bind_BART PF11527.8 ORF81182 - 0.096 12.8 4.8 0.15 12.2 4.8 1.2 1 0 0 1 1 1 0 The ARF-like 2 binding protein BART Toxin_29 PF08116.11 ORF80778 - 0.026 14.5 1.6 0.026 14.5 1.6 2.8 2 1 0 2 2 2 0 PhTx neurotoxin family Fer4_17 PF13534.6 ORF8062 - 9.4 6.9 17.0 5 7.7 1.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain JSRP PF15312.6 ORF80522 - 0.29 11.1 3.9 9 6.3 0.2 2.3 2 0 0 2 2 2 0 Junctional sarcoplasmic reticulum protein F_actin_cap_B PF01115.17 ORF79800 - 0.0042 16.8 0.0 0.0042 16.8 0.0 1.2 1 0 0 1 1 1 1 F-actin capping protein, beta subunit Imm32 PF15566.6 ORF79052 - 0.22 11.3 0.5 5.9 6.8 0.0 2.3 2 0 0 2 2 2 0 Immunity protein 32 Sushi PF00084.20 ORF78685 - 0.0022 18.6 1.1 0.0031 18.1 1.1 1.3 1 0 0 1 1 1 1 Sushi repeat (SCR repeat) U-box PF04564.15 ORF77573 - 6.2e-09 35.9 0.0 8.8e-09 35.4 0.0 1.3 1 0 0 1 1 1 1 U-box domain T3SS_NleG PF06416.12 ORF77573 - 1.9e-05 24.5 0.1 5.4e-05 23.1 0.1 1.7 1 1 0 1 1 1 1 Effector protein NleG CENP-W PF15510.6 ORF77385 - 0.011 15.9 3.1 0.015 15.5 3.1 1.3 1 0 0 1 1 1 0 CENP-W protein Tristanin_u2 PF16638.5 ORF75149 - 0.0023 18.8 0.0 0.0027 18.6 0.0 1.1 1 0 0 1 1 1 1 Unstructured region on methyltransferase between zinc-fingers Rho_Binding PF08912.11 ORF74635 - 0.46 11.3 8.1 0.31 11.9 6.2 1.7 1 1 1 2 2 2 0 Rho Binding DUF4029 PF13221.6 ORF74345 - 0.0061 17.2 0.8 0.0089 16.7 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4029) DUF4490 PF14892.6 ORF74273 - 4.8e-05 23.4 0.1 6.3e-05 23.0 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) DUF4813 PF16072.5 ORF73935 - 0.044 13.5 6.3 0.05 13.3 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4813) Blt1_C PF17183.4 ORF73555 - 0.051 13.2 0.0 0.093 12.3 0.0 1.4 1 0 0 1 1 1 0 Get5 carboxyl domain Podoplanin PF05808.11 ORF73437 - 0.18 11.9 2.2 0.19 11.8 2.2 1.1 1 0 0 1 1 1 0 Podoplanin GRIP PF01465.20 ORF73394 - 0.00046 20.0 0.4 0.00098 19.0 0.4 1.6 1 0 0 1 1 1 1 GRIP domain Dpoe2NT PF12213.8 ORF73394 - 0.027 14.8 3.1 0.13 12.5 0.5 2.4 1 1 1 2 2 2 0 DNA polymerases epsilon N terminal zf_Rg PF17915.1 ORF73242 - 2.7 7.5 0.0 2.7 7.5 0.0 3.1 1 1 2 3 3 3 0 Reverse gyrase zinc finger PPR_2 PF13041.6 ORF73106 - 0.064 13.5 0.0 0.29 11.4 0.0 1.9 1 1 1 2 2 2 0 PPR repeat family DEC-1_N PF04625.13 ORF73019 - 0.031 13.3 0.1 0.035 13.1 0.1 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region cobW PF02492.19 ORF7228 - 0.19 11.3 0.0 0.24 11.0 0.0 1.1 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ERbeta_N PF12497.8 ORF71487 - 0.18 11.6 0.4 6.3 6.6 0.1 2.2 1 1 1 2 2 2 0 Estrogen receptor beta Glycolipid_bind PF06475.11 ORF7100 - 0.093 12.2 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Putative glycolipid-binding Cementoin PF10511.9 ORF70489 - 0.069 13.4 3.0 7.8 7.0 0.2 3.0 1 1 0 2 2 2 0 Trappin protein transglutaminase binding domain EXS PF03124.14 ORF70268 - 0.015 14.6 0.1 0.015 14.6 0.1 1.1 1 0 0 1 1 1 0 EXS family PP2C_C PF07830.13 ORF69709 - 0.064 13.7 0.5 0.13 12.7 0.1 1.6 2 0 0 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain DUF4743 PF15916.5 ORF69709 - 0.069 13.1 0.1 1.3 9.0 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4743) Sid-5 PF17204.3 ORF69688 - 4.3 7.6 8.2 0.27 11.4 0.9 2.2 1 1 2 3 3 3 0 Sid-5 family ACBP PF00887.19 ORF69429 - 2.8e-21 75.5 0.7 3.2e-21 75.3 0.7 1.0 1 0 0 1 1 1 1 Acyl CoA binding protein Ninjurin PF04923.12 ORF68588 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin TTL PF03133.15 ORF68542 - 3.7e-27 95.2 1.2 4.2e-27 95.0 1.2 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family CCDC66 PF15236.6 ORF68484 - 0.00053 19.8 18.2 0.00067 19.5 18.2 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 66 MCD PF05292.11 ORF68484 - 0.23 11.0 3.6 0.27 10.8 3.6 1.0 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase C-terminal domain ORC3_N PF07034.11 ORF68484 - 0.54 9.3 4.3 0.58 9.2 4.3 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 3 N-terminus U79_P34 PF03064.16 ORF68484 - 0.64 9.3 11.6 0.71 9.2 11.6 1.1 1 0 0 1 1 1 0 HSV U79 / HCMV P34 DUF2407_C PF13373.6 ORF68484 - 0.79 9.9 3.7 0.92 9.7 3.7 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain DNApol_Exo PF18136.1 ORF68484 - 0.97 8.5 6.3 1 8.4 6.3 1.0 1 0 0 1 1 1 0 DNA mitochondrial polymerase exonuclease domain DUF5401 PF17380.2 ORF68484 - 4.4 5.3 17.3 5.3 5.0 17.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Ureide_permease PF07168.11 ORF68484 - 5.4 5.7 5.6 6.4 5.4 5.6 1.0 1 0 0 1 1 1 0 Ureide permease Fer4_3 PF12798.7 ORF67583 - 0.052 14.5 0.5 0.052 14.5 0.5 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Csd3_N PF18059.1 ORF67183 - 0.073 13.6 0.1 0.16 12.5 0.1 1.4 1 1 0 1 1 1 0 Csd3 N-terminal SURF2 PF05477.11 ORF67130 - 0.41 10.3 14.4 0.45 10.2 14.4 1.0 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) FYDLN_acid PF09538.10 ORF67130 - 3.2 8.5 16.5 5 7.9 16.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) CYYR1 PF10873.8 ORF66497 - 0.0071 16.8 0.4 0.009 16.5 0.4 1.2 1 0 0 1 1 1 1 Cysteine and tyrosine-rich protein 1 HTH_Mga PF08280.11 ORF6542 - 0.29 11.2 5.0 10 6.3 1.9 2.3 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain ERbeta_N PF12497.8 ORF64632 - 0.18 11.6 0.4 6.3 6.6 0.1 2.2 1 1 1 2 2 2 0 Estrogen receptor beta DUF2457 PF10446.9 ORF64024 - 1.6 7.8 4.5 1.7 7.7 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF2062 PF09835.9 ORF6339 - 0.0021 17.9 0.1 0.0025 17.7 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) Colicin PF01024.19 ORF63321 - 0.13 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Colicin pore forming domain TMEM43 PF07787.12 ORF63321 - 0.18 11.2 0.3 0.24 10.7 0.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 Tho2 PF11262.8 ORF63296 - 0.031 13.5 1.2 0.037 13.2 1.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Antimicrobial_6 PF08036.11 ORF63291 - 0.095 12.8 0.7 0.16 12.1 0.7 1.4 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide PRA1 PF03208.19 ORF62513 - 0.17 11.5 9.5 0.35 10.5 9.5 1.6 1 1 0 1 1 1 0 PRA1 family protein DUF2464 PF10240.9 ORF61957 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 zf-LITAF-like PF10601.9 ORF61219 - 3.9e-16 59.1 10.5 4.9e-16 58.7 10.5 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain TF_Zn_Ribbon PF08271.12 ORF61219 - 0.0019 17.7 2.2 0.24 10.9 0.2 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding zf-ribbon_3 PF13248.6 ORF61219 - 0.0031 16.8 3.6 0.18 11.3 0.4 2.4 2 0 0 2 2 2 2 zinc-ribbon domain zf-RRN7 PF11781.8 ORF61219 - 0.0092 15.6 0.5 0.0092 15.6 0.5 1.8 2 0 0 2 2 2 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Cys_rich_CPXG PF14255.6 ORF61219 - 0.025 14.5 3.1 0.025 14.5 3.1 2.1 3 0 0 3 3 3 0 Cysteine-rich CPXCG RecR PF02132.15 ORF61219 - 0.19 11.3 4.9 0.54 9.9 1.1 2.3 2 0 0 2 2 2 0 RecR protein TPR_2 PF07719.17 ORF60968 - 0.1 12.8 0.2 0.8 10.0 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF60968 - 0.14 12.0 0.1 0.43 10.5 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat OmpH PF03938.14 ORF60850 - 0.63 10.4 18.2 0.93 9.8 18.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2457 PF10446.9 ORF60850 - 6.6 5.8 17.8 7.5 5.6 17.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF4326 PF14216.6 ORF60619 - 0.03 15.0 1.2 0.043 14.5 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4326) DUF2258 PF10015.9 ORF60619 - 0.043 13.9 2.5 0.065 13.4 0.2 2.0 1 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) PAS_11 PF14598.6 ORF60607 - 0.016 15.3 0.0 0.023 14.8 0.0 1.3 1 0 0 1 1 1 0 PAS domain ORC2 PF04084.14 ORF59192 - 0.013 14.4 0.2 0.015 14.2 0.2 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 2 Ninjurin PF04923.12 ORF58754 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin GCM PF03615.15 ORF58733 - 0.012 15.5 0.7 0.013 15.4 0.7 1.2 1 0 0 1 1 1 0 GCM motif protein Glyco_transf_34 PF05637.12 ORF58733 - 0.044 13.5 0.2 0.044 13.5 0.2 1.1 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family DUF4503 PF14951.6 ORF57039 - 0.025 13.0 0.4 0.03 12.8 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4503) MIF4G_like_2 PF09090.11 ORF54496 - 0.3 10.5 0.9 0.34 10.3 0.9 1.1 1 0 0 1 1 1 0 MIF4G like Eapp_C PF10238.9 ORF53985 - 0.047 13.8 0.2 0.058 13.5 0.2 1.1 1 0 0 1 1 1 0 E2F-associated phosphoprotein PsbL PF02419.17 ORF53531 - 1 9.4 7.6 2 8.5 7.6 1.5 1 0 0 1 1 1 0 PsbL protein DUF5527 PF17665.1 ORF52941 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) Cdc6_C PF09079.11 ORF50673 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain DUF4122 PF13498.6 ORF5045 - 0.019 14.6 0.1 0.022 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4122) Carb_anhydrase PF00194.21 ORF50384 - 0.011 15.3 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic-type carbonic anhydrase Adeno_E3 PF06040.11 ORF50384 - 0.92 9.7 2.9 1 9.6 2.9 1.3 1 1 0 1 1 1 0 Adenovirus E3 protein ACT PF01842.25 ORF49233 - 0.013 15.2 0.0 0.021 14.6 0.0 1.3 1 0 0 1 1 1 0 ACT domain DUF4028 PF13220.6 ORF47969 - 0.096 12.5 1.3 0.35 10.7 0.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4028) CE2_N PF17996.1 ORF47292 - 0.18 11.8 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate esterase 2 N-terminal PUF PF00806.19 ORF45646 - 3.9e-07 29.4 0.0 0.0072 16.0 0.0 2.4 2 0 0 2 2 2 2 Pumilio-family RNA binding repeat INTS5_N PF14837.6 ORF45646 - 0.051 13.2 0.0 0.34 10.5 0.1 1.8 1 1 1 2 2 2 0 Integrator complex subunit 5 N-terminus RRM_1 PF00076.22 ORF45194 - 1.1e-10 41.1 0.1 1.4e-10 40.8 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pox_D3 PF04580.13 ORF45194 - 0.0057 16.3 0.1 0.0064 16.2 0.1 1.2 1 0 0 1 1 1 1 Chordopoxvirinae D3 protein zf-LITAF-like PF10601.9 ORF44906 - 3.9e-16 59.1 10.5 4.9e-16 58.7 10.5 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain TF_Zn_Ribbon PF08271.12 ORF44906 - 0.0019 17.7 2.2 0.24 10.9 0.2 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding zf-ribbon_3 PF13248.6 ORF44906 - 0.0031 16.8 3.6 0.18 11.3 0.4 2.4 2 0 0 2 2 2 2 zinc-ribbon domain zf-RRN7 PF11781.8 ORF44906 - 0.0092 15.6 0.5 0.0092 15.6 0.5 1.8 2 0 0 2 2 2 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Cys_rich_CPXG PF14255.6 ORF44906 - 0.025 14.5 3.1 0.025 14.5 3.1 2.1 3 0 0 3 3 3 0 Cysteine-rich CPXCG RecR PF02132.15 ORF44906 - 0.19 11.3 4.9 0.54 9.9 1.1 2.3 2 0 0 2 2 2 0 RecR protein DUF3037 PF11236.8 ORF43926 - 0.098 13.1 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3037) SAM35 PF10806.8 ORF43071 - 0.067 13.5 0.1 0.084 13.1 0.1 1.2 1 0 0 1 1 1 0 SAM35, subunit of SAM coomplex YmgB PF10798.8 ORF42740 - 0.019 14.8 0.4 0.24 11.3 0.0 2.2 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR UCR_UQCRX_QCR9 PF05365.12 ORF4245 - 0.11 12.4 0.0 0.28 11.2 0.0 1.6 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like Pox_Ag35 PF03286.14 ORF42215 - 0.96 9.2 10.0 1 9.1 10.0 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein PBP_sp32 PF07222.12 ORF42215 - 1.1 8.7 6.8 1.1 8.6 6.8 1.0 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Zip PF02535.22 ORF42215 - 3.8 6.6 4.4 4 6.6 4.4 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Astro_capsid_p PF12226.8 ORF42215 - 4.7 6.3 7.9 4.6 6.3 7.9 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein NOA36 PF06524.12 ORF42215 - 9.2 5.5 11.6 8.9 5.5 11.6 1.1 1 0 0 1 1 1 0 NOA36 protein IQ PF00612.27 ORF42081 - 5.6e-05 22.6 0.6 9.8e-05 21.8 0.6 1.4 1 0 0 1 1 1 1 IQ calmodulin-binding motif SNARE_assoc PF09335.11 ORF41999 - 0.00051 20.5 1.1 0.00064 20.2 1.1 1.2 1 0 0 1 1 1 1 SNARE associated Golgi protein DUF4490 PF14892.6 ORF41861 - 4.8e-05 23.4 0.1 6.3e-05 23.0 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) TraD_N PF12615.8 ORF41850 - 0.063 14.0 0.2 0.073 13.8 0.2 1.1 1 0 0 1 1 1 0 F sex factor protein N terminal DsbD PF02683.15 ORF41475 - 8.6e-06 25.8 2.8 9.8e-06 25.6 2.8 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region IF3_C PF00707.22 ORF41475 - 0.15 12.1 0.3 0.21 11.6 0.3 1.2 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain TIR_3 PF18567.1 ORF40008 - 0.18 11.8 4.2 0.22 11.5 4.2 1.2 1 0 0 1 1 1 0 Toll/interleukin-1 receptor domain YtxC PF08812.11 ORF39801 - 0.022 14.4 0.1 0.025 14.2 0.1 1.1 1 0 0 1 1 1 0 YtxC-like family DUF1360 PF07098.11 ORF38872 - 0.021 14.8 0.0 0.027 14.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) Ninjurin PF04923.12 ORF34493 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin RAI16-like PF10257.9 ORF34412 - 0.13 11.1 0.2 0.13 11.1 0.2 1.0 1 0 0 1 1 1 0 Retinoic acid induced 16-like protein DUF4630 PF15443.6 ORF33915 - 0.038 14.2 1.0 0.044 14.0 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4630) MVL PF12151.8 ORF33853 - 0.015 15.1 1.5 0.036 13.9 1.5 1.7 1 0 0 1 1 1 0 Mannan-binding protein Sid-5 PF17204.3 ORF32153 - 4.3 7.6 8.2 0.27 11.4 0.9 2.2 1 1 2 3 3 3 0 Sid-5 family Ribosomal_L40e PF01020.17 ORF31610 - 0.15 12.0 0.1 0.15 12.0 0.1 1.8 2 1 0 2 2 2 0 Ribosomal L40e family Pmp3 PF01679.17 ORF30828 - 0.045 13.9 1.6 0.087 13.0 1.6 1.7 1 1 0 1 1 1 0 Proteolipid membrane potential modulator Pkinase PF00069.25 ORF30627 - 7.3e-07 28.8 0.0 7.5e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30627 - 0.001 18.5 0.0 0.001 18.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF30627 - 0.032 13.5 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Kinase-like 2-Hacid_dh_C PF02826.19 ORF3039 - 1.7e-24 86.2 0.0 2.6e-24 85.6 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF3039 - 4.3e-05 23.2 0.0 4.4e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Toxin_2 PF00451.19 ORF30254 - 0.91 9.9 5.8 0.17 12.3 2.3 1.6 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 Imm50 PF15594.6 ORF3012 - 0.073 13.3 0.9 0.25 11.6 0.1 2.1 1 1 1 2 2 2 0 Immunity protein 50 NTPase_I-T PF01931.18 ORF29894 - 1e-05 25.4 0.0 1.7e-05 24.7 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function DUF84 zf_Rg PF17915.1 ORF289 - 2.7 7.5 0.0 2.7 7.5 0.0 3.1 1 1 2 3 3 3 0 Reverse gyrase zinc finger DUF1682 PF07946.14 ORF2832 - 0.046 12.9 0.7 0.046 12.9 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) CCDC24 PF15669.5 ORF28187 - 0.22 11.4 4.1 0.26 11.1 4.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family PHD_3 PF13922.6 ORF2811 - 0.29 11.6 3.1 0.47 10.9 3.1 1.4 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx Y_phosphatase PF00102.27 ORF28041 - 0.035 13.7 0.1 0.038 13.6 0.1 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase AGTRAP PF06396.11 ORF28041 - 0.076 12.8 0.5 0.083 12.7 0.5 1.1 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) DUF5625 PF18539.1 ORF27972 - 0.023 15.0 0.1 0.032 14.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5625) Ninjurin PF04923.12 ORF27359 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin Pex2_Pex12 PF04757.14 ORF27192 - 0.0021 17.7 1.6 0.029 14.0 0.3 2.0 1 1 1 2 2 2 2 Pex2 / Pex12 amino terminal region Mito_carr PF00153.27 ORF27130 - 0.054 13.4 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial carrier protein DUF4668 PF15701.5 ORF26297 - 0.11 12.4 4.9 0.13 12.1 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) zf-RING_11 PF17123.5 ORF259 - 4.7e-05 23.0 1.2 0.0019 17.9 0.2 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF259 - 0.0012 19.0 2.3 0.039 14.2 0.3 2.3 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF259 - 0.0044 17.3 6.3 0.023 15.0 0.2 2.7 3 0 0 3 3 3 1 Ring finger domain zf-C3HC4 PF00097.25 ORF259 - 0.033 14.0 1.2 0.15 11.9 0.1 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF259 - 0.042 13.7 1.7 0.23 11.3 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) YhfH PF14149.6 ORF259 - 0.047 13.7 0.7 0.069 13.1 0.1 1.6 2 0 0 2 2 2 0 YhfH-like protein PHD PF00628.29 ORF259 - 0.14 12.1 2.6 1.4 8.9 0.2 2.2 2 0 0 2 2 2 0 PHD-finger zf-ANAPC11 PF12861.7 ORF259 - 0.21 11.6 3.9 2.1 8.5 3.9 2.1 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger DUF4756 PF15948.5 ORF24715 - 0.048 13.5 0.1 0.061 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4756) NUDIX_5 PF16705.5 ORF24715 - 0.085 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 NUDIX, or N-terminal NPxY motif-rich, region of KRIT DUF2464 PF10240.9 ORF24073 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 NCD3G PF07562.14 ORF23429 - 5.4e-05 23.1 30.4 0.003 17.5 5.6 4.0 3 1 1 4 4 4 4 Nine Cysteines Domain of family 3 GPCR VitD-bind_III PF09164.10 ORF23429 - 5.7 7.0 20.5 0.87 9.6 0.5 3.6 4 0 0 4 4 4 0 Vitamin D binding protein, domain III DUF2854 PF11016.8 ORF23082 - 0.03 14.2 0.5 0.034 14.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) RXLR PF16810.5 ORF23082 - 0.11 13.0 4.7 0.14 12.6 4.7 1.1 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity Ribosomal_L30 PF00327.20 ORF23082 - 1.7 8.6 18.4 0.87 9.5 0.8 3.5 1 1 2 3 3 3 0 Ribosomal protein L30p/L7e Prok-RING_1 PF14446.6 ORF23049 - 0.00044 20.1 1.2 0.00044 20.1 1.2 2.2 2 1 0 2 2 2 1 Prokaryotic RING finger family 1 DUF1430 PF07242.11 ORF22444 - 0.044 14.0 3.3 0.047 13.9 3.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1430) Zn-C2H2_12 PF18112.1 ORF22141 - 0.014 15.9 0.3 0.03 14.8 0.3 1.6 1 0 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain UPF0242 PF06785.11 ORF21815 - 0.1 12.7 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FAS_N PF17828.1 ORF20310 - 0.0095 15.9 0.4 0.013 15.5 0.4 1.1 1 0 0 1 1 1 1 N-terminal domain in fatty acid synthase subunit beta Anoct_dimer PF16178.5 ORF20310 - 0.082 12.6 0.4 0.096 12.4 0.4 1.1 1 0 0 1 1 1 0 Dimerisation domain of Ca+-activated chloride-channel, anoctamin Med27 PF11571.8 ORF20220 - 0.069 13.5 0.1 0.088 13.2 0.1 1.3 1 0 0 1 1 1 0 Mediator complex subunit 27 DUF2009 PF09418.10 ORF20148 - 0.032 13.3 0.0 0.038 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2009) SRP9-21 PF05486.12 ORF20006 - 0.0076 16.6 2.5 0.16 12.4 0.0 2.6 1 1 2 3 3 3 2 Signal recognition particle 9 kDa protein (SRP9) DUF2464 PF10240.9 ORF19928 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 Met_synt_B12 PF02965.17 ORF17423 - 4.3e-21 75.6 0.0 5.2e-21 75.3 0.0 1.1 1 0 0 1 1 1 1 Vitamin B12 dependent methionine synthase, activation domain Ninjurin PF04923.12 ORF17325 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin ECSCR PF15820.5 ORF16455 - 0.033 14.0 3.0 0.033 14.0 3.0 1.6 1 1 1 2 2 2 0 Endothelial cell-specific chemotaxis regulator DUF4806 PF16064.5 ORF152973 - 0.11 12.9 0.1 0.13 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4806) Hep_core_N PF08290.11 ORF152935 - 0.029 14.3 0.4 0.086 12.8 0.4 1.8 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger JSRP PF15312.6 ORF152160 - 0.29 11.1 3.9 9 6.3 0.2 2.3 2 0 0 2 2 2 0 Junctional sarcoplasmic reticulum protein OmpH PF03938.14 ORF152130 - 0.63 10.4 18.2 0.93 9.8 18.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2457 PF10446.9 ORF152130 - 6.6 5.8 17.8 7.5 5.6 17.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Pentapeptide_4 PF13599.6 ORF151388 - 0.076 13.2 2.5 0.82 9.9 2.6 2.1 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) Pentapeptide PF00805.22 ORF151388 - 0.11 12.2 0.3 2.6 7.8 0.1 2.2 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) zf_Rg PF17915.1 ORF150725 - 2.7 7.5 0.0 2.7 7.5 0.0 3.1 1 1 2 3 3 3 0 Reverse gyrase zinc finger DUF2237 PF09996.9 ORF149928 - 0.0015 18.5 0.5 0.003 17.5 0.4 1.6 1 1 1 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2237) Herpes_UL49_2 PF04823.12 ORF149814 - 0.41 10.8 1.9 0.76 9.9 0.3 2.0 1 1 1 2 2 2 0 Herpesvirus UL49 tegument protein Ninjurin PF04923.12 ORF148991 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin Complex1_30kDa PF00329.19 ORF14810 - 0.064 13.9 0.0 0.08 13.6 0.0 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GluR_Homer-bdg PF10606.9 ORF147509 - 0.06 13.6 1.6 0.12 12.6 1.6 1.6 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor Peptidase_M1_N PF17900.1 ORF147130 - 9.8e-13 48.7 0.1 1.2e-12 48.4 0.1 1.0 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain CCDC24 PF15669.5 ORF147061 - 0.22 11.4 4.1 0.26 11.1 4.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family CHCH PF06747.13 ORF146688 - 0.00018 21.5 8.3 0.00018 21.5 8.3 1.7 1 1 1 2 2 2 1 CHCH domain SRCR PF00530.18 ORF146688 - 0.0077 16.7 1.8 0.0077 16.7 1.8 1.4 1 1 0 1 1 1 1 Scavenger receptor cysteine-rich domain Pet191_N PF10203.9 ORF146688 - 0.012 15.8 4.6 0.018 15.3 4.6 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein PET191 Cmc1 PF08583.10 ORF146688 - 0.047 13.7 5.7 0.75 9.9 0.6 2.1 1 1 1 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like RNase_T PF00929.24 ORF146030 - 8.8e-14 52.4 0.5 9.9e-14 52.2 0.5 1.0 1 0 0 1 1 1 1 Exonuclease DUF5051 PF16473.5 ORF146030 - 0.0046 17.0 0.1 0.0051 16.8 0.1 1.0 1 0 0 1 1 1 1 3' exoribonuclease, RNase T-like AftA_C PF12249.8 ORF145968 - 0.066 12.9 0.0 0.09 12.4 0.0 1.4 1 1 0 1 1 1 0 Arabinofuranosyltransferase A C terminal DUF5527 PF17665.1 ORF143566 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) Tho2 PF11262.8 ORF143490 - 0.031 13.5 1.2 0.037 13.2 1.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 HTH_31 PF13560.6 ORF143315 - 0.00077 19.8 0.8 0.0012 19.2 0.4 1.6 1 1 1 2 2 2 1 Helix-turn-helix domain Chalcone PF02431.15 ORF143174 - 0.13 11.7 1.1 0.16 11.4 1.1 1.1 1 0 0 1 1 1 0 Chalcone-flavanone isomerase Phe_hydrox_dim PF07976.12 ORF143027 - 0.14 12.2 0.0 0.2 11.7 0.0 1.3 1 1 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain Ninjurin PF04923.12 ORF142498 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin DUF3487 PF11990.8 ORF142283 - 0.053 13.4 0.2 1.2 9.0 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) Vpu PF00558.19 ORF142283 - 0.1 12.4 0.1 0.1 12.4 0.1 2.0 1 1 1 2 2 2 0 Vpu protein Sdh_cyt PF01127.22 ORF142283 - 0.12 12.5 1.0 0.16 12.0 1.0 1.1 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NEMP PF10225.9 ORF142283 - 4.8 6.8 9.7 2.2 7.9 6.0 1.8 1 1 1 2 2 2 0 NEMP family MSA-2c PF12238.8 ORF140013 - 0.87 9.5 4.0 0.92 9.5 4.0 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF5408 PF17402.2 ORF139120 - 5.6 6.9 6.0 2.1 8.3 1.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5408) Toxin_37 PF11415.8 ORF138374 - 0.0023 17.7 3.2 0.0034 17.2 3.2 1.3 1 0 0 1 1 1 1 Antifungal peptide termicin YsaB PF13983.6 ORF138248 - 4.1e-42 142.3 1.1 4.8e-42 142.1 1.1 1.0 1 0 0 1 1 1 1 YsaB-like lipoprotein DUF2464 PF10240.9 ORF138068 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 DUF1358 PF07096.11 ORF137605 - 0.039 13.9 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) DUF5527 PF17665.1 ORF136619 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) DUF3325 PF11804.8 ORF136426 - 0.0015 18.6 3.3 0.002 18.2 3.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3325) ICAM_N PF03921.14 ORF136276 - 0.013 15.2 0.1 0.018 14.7 0.1 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain Toxin_12 PF07740.12 ORF136196 - 0.64 10.8 6.4 4.1 8.2 0.4 2.8 3 0 0 3 3 3 0 Ion channel inhibitory toxin DUF5309 PF17236.2 ORF13606 - 0.11 11.8 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5309) HisKA_2 PF07568.12 ORF13587 - 0.0072 16.4 1.1 0.01 15.9 1.1 1.5 1 1 0 1 1 1 1 Histidine kinase DUF1874 PF08960.10 ORF13587 - 0.014 15.5 0.2 0.022 14.9 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1874) CBF PF03914.17 ORF135701 - 0.16 12.0 0.4 0.2 11.7 0.4 1.1 1 0 0 1 1 1 0 CBF/Mak21 family UCR_hinge PF02320.16 ORF135614 - 0.00085 19.5 0.4 0.083 13.1 0.2 2.1 2 0 0 2 2 2 2 Ubiquinol-cytochrome C reductase hinge protein DUF5527 PF17665.1 ORF135002 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) DUF902 PF06001.13 ORF132909 - 5.1 7.7 8.0 2.6 8.6 4.8 2.1 3 0 0 3 3 3 0 Domain of Unknown Function (DUF902) DEC-1_N PF04625.13 ORF132896 - 0.031 13.3 0.1 0.035 13.1 0.1 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region MKRN1_C PF15815.5 ORF131701 - 0.13 12.7 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase makorin-1, C-terminal RHH_1 PF01402.21 ORF130980 - 6.9e-11 41.7 0.8 1.2e-10 40.9 0.8 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_3 PF12651.7 ORF130980 - 0.023 14.7 0.4 0.042 13.8 0.4 1.5 1 1 0 1 1 1 0 Ribbon-helix-helix domain AKAP7_RIRII_bdg PF10470.9 ORF130980 - 0.087 12.9 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 PKA-RI-RII subunit binding domain of A-kinase anchor protein BPD_transp_1 PF00528.22 ORF130670 - 7.8e-18 64.9 3.9 8.5e-18 64.7 3.9 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CCDC24 PF15669.5 ORF13024 - 0.22 11.4 4.1 0.26 11.1 4.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family CAV_VP3 PF04771.12 ORF129881 - 0.13 12.4 1.1 0.19 11.9 1.1 1.3 1 1 0 1 1 1 0 Chicken anaemia virus VP-3 protein PP2C PF00481.21 ORF128511 - 3.2e-13 49.9 0.0 3.6e-13 49.7 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF128511 - 0.023 14.6 0.0 0.024 14.5 0.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) ERbeta_N PF12497.8 ORF127312 - 0.18 11.6 0.4 6.3 6.6 0.1 2.2 1 1 1 2 2 2 0 Estrogen receptor beta TMEM187 PF15100.6 ORF127269 - 0.057 13.0 0.0 0.062 12.9 0.0 1.0 1 0 0 1 1 1 0 TMEM187 protein family adh_short PF00106.25 ORF12681 - 9e-16 57.9 3.4 2.8e-14 53.1 1.4 2.0 1 1 1 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF12681 - 2e-09 37.3 0.3 5.4e-09 36.0 0.2 1.6 1 1 1 2 2 2 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF12681 - 2.5e-05 24.2 0.2 3.3e-05 23.9 0.2 1.1 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF12681 - 0.019 14.1 0.2 0.021 13.9 0.2 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein LEA_5 PF00477.17 ORF12681 - 0.037 14.5 0.2 0.041 14.3 0.2 1.1 1 0 0 1 1 1 0 Small hydrophilic plant seed protein Epimerase PF01370.21 ORF12681 - 0.042 13.3 0.0 0.046 13.2 0.0 1.0 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family GST_C_6 PF17171.4 ORF126054 - 2.8e-05 23.8 0.2 5.2e-05 22.9 0.0 1.5 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF126054 - 7.1e-05 22.9 0.0 9.1e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF126054 - 0.00047 20.1 2.1 0.00056 19.9 0.4 2.0 1 1 1 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF126054 - 0.001 19.3 0.0 0.0015 18.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Ninjurin PF04923.12 ORF124195 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin bHLH-MYC_N PF14215.6 ORF123600 - 0.033 14.5 0.1 0.039 14.2 0.1 1.1 1 0 0 1 1 1 0 bHLH-MYC and R2R3-MYB transcription factors N-terminal Ninjurin PF04923.12 ORF123370 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin Med3 PF11593.8 ORF123316 - 0.49 9.5 6.1 0.52 9.4 6.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Ninjurin PF04923.12 ORF122406 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin STAG PF08514.11 ORF122152 - 0.11 12.4 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 STAG domain Ninjurin PF04923.12 ORF121841 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin DUF1358 PF07096.11 ORF12101 - 0.039 13.9 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) DUSP PF06337.12 ORF120303 - 2.9e-10 40.6 0.2 3.8e-10 40.3 0.2 1.2 1 0 0 1 1 1 1 DUSP domain CBF PF03914.17 ORF119966 - 0.16 12.0 0.4 0.2 11.7 0.4 1.1 1 0 0 1 1 1 0 CBF/Mak21 family DUF2773 PF10971.8 ORF119507 - 0.085 13.0 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2773) Imm19 PF15563.6 ORF119230 - 0.058 12.9 0.0 0.064 12.7 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 19 DUF2475 PF10629.9 ORF118810 - 0.0064 16.7 0.4 0.012 15.8 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2475) RNase_H_2 PF13482.6 ORF118318 - 0.06 13.3 0.0 0.062 13.3 0.0 1.2 1 0 0 1 1 1 0 RNase_H superfamily SPT_ssu-like PF11779.8 ORF117358 - 0.052 13.2 2.6 0.091 12.4 2.6 1.4 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like HTH_51 PF18558.1 ORF117214 - 0.057 13.3 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1100 PF06500.11 ORF116055 - 2e-45 155.3 0.0 2.2e-45 155.2 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1100) Zip PF02535.22 ORF116046 - 1.6 7.9 8.7 2 7.5 8.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Arf PF00025.21 ORF11575 - 3.4e-19 69.0 0.0 3.7e-19 68.8 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family HlyIII PF03006.20 ORF115579 - 1.6e-12 47.7 8.1 1.9e-12 47.4 8.1 1.1 1 0 0 1 1 1 1 Haemolysin-III related # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks270.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks270.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks270.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks270.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YqhG PF11079.8 ORF115213 - 0.0011 18.0 0.0 0.0012 17.9 0.0 1.0 1 0 0 1 1 1 1 Bacterial protein YqhG of unknown function CBP_BcsG PF11658.8 ORF115213 - 0.0095 14.4 0.4 0.0096 14.4 0.4 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG Virul_Fac PF10139.9 ORF115213 - 0.031 12.5 0.1 0.037 12.3 0.1 1.0 1 0 0 1 1 1 0 Putative bacterial virulence factor DSHCT PF08148.12 ORF115213 - 0.062 13.0 0.2 0.077 12.7 0.2 1.1 1 0 0 1 1 1 0 DSHCT (NUC185) domain RNA_pol_Rpb6 PF01192.22 ORF1148 - 6.9e-13 48.3 0.1 1.1e-12 47.7 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb6 NOG1_N PF17835.1 ORF113640 - 0.12 12.4 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 NOG1 N-terminal helical domain DUF832 PF05734.11 ORF11286 - 0.097 12.1 0.0 0.11 12.0 0.0 1.3 1 1 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) SHP PF03579.13 ORF111735 - 0.0079 16.1 0.7 0.015 15.2 0.7 1.5 1 0 0 1 1 1 1 Small hydrophobic protein Fer4_17 PF13534.6 ORF111290 - 9.4 6.9 17.0 5 7.7 1.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF3817 PF12823.7 ORF110442 - 0.0044 17.8 1.3 0.0053 17.5 1.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3817) YccF PF03733.13 ORF110442 - 0.063 14.0 0.7 0.063 14.0 0.7 1.8 2 0 0 2 2 2 0 Inner membrane component domain DUF5527 PF17665.1 ORF110023 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) Trypan_PARP PF05887.11 ORF109760 - 0.1 12.5 6.8 0.13 12.3 6.8 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) TIR_3 PF18567.1 ORF10870 - 0.18 11.8 4.2 0.22 11.5 4.2 1.2 1 0 0 1 1 1 0 Toll/interleukin-1 receptor domain Y_phosphatase2 PF03162.13 ORF108668 - 0.008 15.8 1.7 0.01 15.5 1.7 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family DUF3537 PF12056.8 ORF108668 - 0.24 10.2 9.3 0.17 10.7 0.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3537) DUF5527 PF17665.1 ORF108659 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) Ninjurin PF04923.12 ORF107816 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin DUF2256 PF10013.9 ORF10755 - 0.084 13.0 0.9 0.16 12.1 0.9 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) CLASP_N PF12348.8 ORF107291 - 0.0025 17.4 0.9 0.0028 17.2 0.9 1.0 1 0 0 1 1 1 1 CLASP N terminal Utp12 PF04003.12 ORF107291 - 0.0039 17.5 0.5 0.0049 17.2 0.5 1.3 1 1 0 1 1 1 1 Dip2/Utp12 Family TIR_3 PF18567.1 ORF107124 - 0.18 11.8 4.2 0.22 11.5 4.2 1.2 1 0 0 1 1 1 0 Toll/interleukin-1 receptor domain Tmemb_170 PF10190.9 ORF106707 - 0.13 12.7 10.9 0.38 11.1 2.7 2.1 1 1 1 2 2 2 0 Putative transmembrane protein 170 Bac_export_2 PF01312.19 ORF106707 - 0.2 10.8 2.3 0.22 10.7 2.3 1.1 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family Metallothio_11 PF02066.15 ORF106700 - 0.08 13.1 2.8 0.08 13.1 2.8 1.6 2 0 0 2 2 2 0 Metallothionein family 11 Asp5 PF17000.5 ORF106700 - 0.2 11.8 4.2 2.2 8.5 0.1 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec, Asp5 DUF2464 PF10240.9 ORF104940 - 0.043 13.4 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Multivesicular body subunit 12 Csd3_N PF18059.1 ORF10422 - 0.073 13.6 0.1 0.16 12.5 0.1 1.4 1 1 0 1 1 1 0 Csd3 N-terminal Zip PF02535.22 ORF103881 - 1.6 7.9 8.7 2 7.5 8.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter zf-LITAF-like PF10601.9 ORF103836 - 3.9e-16 59.1 10.5 4.9e-16 58.7 10.5 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain TF_Zn_Ribbon PF08271.12 ORF103836 - 0.0019 17.7 2.2 0.24 10.9 0.2 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding zf-ribbon_3 PF13248.6 ORF103836 - 0.0031 16.8 3.6 0.18 11.3 0.4 2.4 2 0 0 2 2 2 2 zinc-ribbon domain zf-RRN7 PF11781.8 ORF103836 - 0.0092 15.6 0.5 0.0092 15.6 0.5 1.8 2 0 0 2 2 2 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Cys_rich_CPXG PF14255.6 ORF103836 - 0.025 14.5 3.1 0.025 14.5 3.1 2.1 3 0 0 3 3 3 0 Cysteine-rich CPXCG RecR PF02132.15 ORF103836 - 0.19 11.3 4.9 0.54 9.9 1.1 2.3 2 0 0 2 2 2 0 RecR protein SR-25 PF10500.9 ORF103573 - 0.018 14.6 18.7 0.019 14.6 18.7 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Herpes_pp85 PF04637.12 ORF103573 - 2 6.7 8.1 2.1 6.6 8.1 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF4614 PF15391.6 ORF103573 - 9 6.3 14.4 11 6.0 14.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) DUF3619 PF12279.8 ORF103431 - 0.97 9.8 2.6 0.82 10.0 1.4 1.5 1 1 0 2 2 2 0 Protein of unknown function (DUF3619) Ninjurin PF04923.12 ORF103330 - 0.024 14.5 0.8 0.037 14.0 0.8 1.3 1 0 0 1 1 1 0 Ninjurin DUF5527 PF17665.1 ORF102845 - 0.0094 15.5 1.4 0.011 15.2 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) DUF3727 PF12527.8 ORF102510 - 0.057 13.6 0.6 0.074 13.3 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3727) Doppel PF11466.8 ORF102398 - 0.37 10.5 4.3 0.45 10.2 3.0 1.8 1 1 1 2 2 2 0 Prion-like protein Doppel RCC1 PF00415.18 ORF102245 - 1.8e-10 41.2 0.1 2.8e-10 40.6 0.1 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF102245 - 0.00025 20.7 0.1 0.76 9.6 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat zf-C2H2_4 PF13894.6 ORF101707 - 0.013 16.3 1.0 0.013 16.3 1.0 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger zf-3CxxC PF13695.6 ORF101707 - 0.019 15.4 0.9 0.021 15.3 0.9 1.2 1 0 0 1 1 1 0 Zinc-binding domain Rad50_zn_hook PF04423.14 ORF101707 - 0.043 13.6 0.0 0.065 13.1 0.0 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif SWIM PF04434.17 ORF101707 - 0.11 12.2 1.4 0.19 11.4 1.4 1.4 1 0 0 1 1 1 0 SWIM zinc finger zf-RING_4 PF14570.6 ORF101707 - 0.14 12.0 3.1 0.16 11.8 0.0 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain DUF5600 PF18150.1 ORF100936 - 0.035 14.7 0.0 0.043 14.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5600) DUF679 PF05078.12 ORF100930 - 0.062 13.3 0.6 0.076 13.0 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF679) DUF5450 PF17529.2 ORF100777 - 0.071 13.2 0.5 0.081 13.1 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5450) Defensin_RK-1 PF17860.1 NODE_57756_length_292_cov_1.054475_g49817_i0forward_frame_1 - 0.15 12.6 1.8 0.28 11.7 1.4 1.7 2 0 0 2 2 2 0 RK-1-like defensin SLBP_RNA_bind PF15247.6 NODE_57743_length_292_cov_1.451362_g49804_i0forward_frame_1 - 0.014 15.5 2.1 0.019 15.1 2.1 1.3 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain DUF3172 PF11371.8 NODE_57742_length_292_cov_1.459144_g49803_i0forward_frame_1 - 0.085 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3172) TPR_2 PF07719.17 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 4.6e-09 35.7 0.5 1e-08 34.7 0.0 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 8.4e-08 31.7 0.3 2.6e-07 30.2 0.1 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 1.5e-06 28.2 0.6 0.0033 17.7 0.2 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 8.2e-06 25.4 1.5 0.00025 20.6 0.5 2.2 1 1 1 2 2 2 2 TPR repeat TPR_8 PF13181.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 6.2e-05 22.9 0.7 0.00012 22.0 0.1 1.9 2 0 0 2 2 1 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.00024 21.2 0.7 0.00033 20.8 0.7 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.00028 21.5 0.0 0.00038 21.1 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.00031 21.2 0.0 0.00041 20.8 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.01 16.6 0.0 0.023 15.5 0.0 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat NARP1 PF12569.8 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.018 14.0 0.1 0.02 13.8 0.1 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TPR_12 PF13424.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.051 13.9 0.0 0.075 13.3 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.055 14.1 0.0 0.094 13.4 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_20 PF14561.6 NODE_57735_length_292_cov_1.731518_g49796_i0reverse_frame_1 - 0.2 12.0 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Ribosomal_L10 PF00466.20 NODE_57729_length_292_cov_1.922179_g49790_i0reverse_frame_1 - 0.067 13.3 0.0 0.072 13.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L10 TSC21 PF15217.6 NODE_57727_length_292_cov_1.941634_g49788_i0forward_frame_1 - 0.039 13.9 0.0 0.041 13.8 0.0 1.1 1 0 0 1 1 1 0 TSC21 family Trefoil PF00088.18 NODE_57726_length_292_cov_1.961089_g49787_i0reverse_frame_1 - 0.035 14.0 3.0 4.7 7.2 0.1 2.4 3 0 0 3 3 3 0 Trefoil (P-type) domain PUF PF00806.19 NODE_57716_length_292_cov_2.607004_g49777_i0forward_frame_1 - 2.2e-17 61.6 2.8 1.5e-08 33.9 0.3 3.1 3 0 0 3 3 3 2 Pumilio-family RNA binding repeat DUF3819 PF12842.7 NODE_57716_length_292_cov_2.607004_g49777_i0forward_frame_1 - 0.025 14.5 0.3 0.03 14.3 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3819) CNOT1_HEAT PF16418.5 NODE_57716_length_292_cov_2.607004_g49777_i0forward_frame_1 - 0.1 12.6 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat SHIPPO-rpt PF07004.12 NODE_57715_length_292_cov_2.618677_g49776_i0forward_frame_1 - 0.19 12.7 4.1 7.9 7.6 0.0 2.9 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat CTK3 PF12243.8 NODE_57713_length_292_cov_2.688716_g49774_i0forward_frame_1 - 0.014 15.4 0.2 0.017 15.1 0.2 1.2 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 RSN1_TM PF13967.6 NODE_57709_length_292_cov_2.898833_g49770_i0reverse_frame_1 - 1.1 9.0 13.3 1.4 8.7 13.3 1.0 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport Molydop_binding PF01568.21 NODE_57708_length_292_cov_2.914397_g49769_i0forward_frame_1 - 2.2e-21 76.0 0.0 2.4e-21 75.8 0.0 1.0 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Lamprin PF06403.11 NODE_57695_length_292_cov_5.295720_g49756_i0forward_frame_1 - 1.5 8.7 21.3 1.4 8.8 4.8 2.2 1 1 1 2 2 2 0 Lamprin DUF3675 PF12428.8 NODE_57694_length_292_cov_6.665370_g49755_i0reverse_frame_1 - 0.017 15.7 3.3 0.017 15.7 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) ECSCR PF15820.5 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_1 - 0.056 13.3 0.4 0.056 13.3 0.4 1.7 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator Hanta_G2 PF01561.16 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_1 - 0.39 9.3 1.9 0.51 8.9 1.9 1.1 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 SP_C-Propep PF08999.10 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_1 - 1.9 8.3 7.4 0.19 11.6 1.3 2.0 2 0 0 2 2 2 0 Surfactant protein C, N terminal propeptide LRR19-TM PF15176.6 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_1 - 4.3 7.4 5.8 0.33 11.0 0.7 1.7 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain SdpA PF17418.2 NODE_57691_length_292_cov_29.085603_g49752_i0reverse_frame_1 - 0.04 13.8 0.4 0.046 13.6 0.4 1.1 1 0 0 1 1 1 0 Sporulation delaying protein SdpA Herpes_LMP1 PF05297.11 NODE_57691_length_292_cov_29.085603_g49752_i0forward_frame_1 - 0.88 8.7 4.9 0.85 8.8 4.9 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Sel1 PF08238.12 NODE_57689_length_292_cov_38.093385_g49750_i0reverse_frame_1 - 4.1e-14 52.7 1.7 6.3e-06 26.7 1.2 2.1 2 0 0 2 2 2 2 Sel1 repeat Aa_trans PF01490.18 NODE_57686_length_292_cov_44.447471_g49747_i0forward_frame_1 - 1.2e-10 40.7 6.4 1.5e-10 40.4 6.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 NODE_57686_length_292_cov_44.447471_g49747_i0forward_frame_1 - 1.9e-06 27.2 4.6 2.4e-06 26.9 4.6 1.1 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF2207 PF09972.9 NODE_57686_length_292_cov_44.447471_g49747_i0forward_frame_1 - 0.26 10.0 0.9 0.27 9.9 0.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Peptidase_M99_C PF17129.4 NODE_57682_length_292_cov_50.638132_g49743_i0reverse_frame_1 - 0.034 14.3 1.8 0.045 14.0 1.8 1.1 1 0 0 1 1 1 0 C-terminal domain of metallo-carboxypeptidase DUF4097 PF13349.6 NODE_57682_length_292_cov_50.638132_g49743_i0reverse_frame_1 - 0.067 12.5 0.0 0.098 12.0 0.0 1.2 1 0 0 1 1 1 0 Putative adhesin DUF4081 PF13312.6 NODE_57681_length_292_cov_52.817121_g49742_i0reverse_frame_1 - 0.1 12.8 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4081) SR-25 PF10500.9 NODE_57681_length_292_cov_52.817121_g49742_i0reverse_frame_1 - 0.69 9.5 13.0 0.86 9.2 13.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DNA_pol_A_exo1 PF01612.20 NODE_57678_length_292_cov_56.000000_g49739_i0forward_frame_1 - 0.002 17.8 0.0 0.0024 17.6 0.0 1.1 1 0 0 1 1 1 1 3'-5' exonuclease zf-Nse PF11789.8 NODE_57677_length_292_cov_56.381323_g49738_i0reverse_frame_1 - 0.018 14.9 0.3 0.03 14.1 0.3 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit LSM PF01423.22 NODE_57675_length_292_cov_60.210117_g49736_i0forward_frame_1 - 8.3e-06 25.4 0.0 1.2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 LSM domain DUF192 PF02643.15 NODE_57673_length_292_cov_64.750973_g49734_i0forward_frame_1 - 2.8e-06 27.4 0.0 3.8e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 DUF2158 PF09926.9 NODE_57673_length_292_cov_64.750973_g49734_i0forward_frame_1 - 0.14 11.9 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized small protein (DUF2158) HA2 PF04408.23 NODE_57668_length_292_cov_73.770428_g49729_i0reverse_frame_1 - 1.5e-05 25.2 0.0 1.6e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Helicase associated domain (HA2) 7TM_GPCR_Srv PF10323.9 NODE_57665_length_292_cov_76.591440_g49726_i0reverse_frame_1 - 0.011 15.1 1.6 0.013 14.9 1.6 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srv SPT_ssu-like PF11779.8 NODE_57662_length_292_cov_78.385214_g49723_i0forward_frame_1 - 0.076 12.6 3.9 0.13 11.9 3.9 1.3 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like RACo_linker PF17650.1 NODE_57656_length_292_cov_97.042802_g49717_i0forward_frame_1 - 0.007 16.2 0.0 0.0097 15.7 0.0 1.2 1 0 0 1 1 1 1 RACo linker region Coat_X PF07552.11 NODE_57648_length_292_cov_130.299611_g49709_i0forward_frame_1 - 0.085 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Spore Coat Protein X and V domain SID-1_RNA_chan PF13965.6 NODE_57642_length_292_cov_177.466926_g49703_i0forward_frame_1 - 0.4 9.0 4.3 0.47 8.8 4.3 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Peptidase_M9 PF01752.17 NODE_57633_length_293_cov_0.992248_g49694_i0forward_frame_1 - 0.0031 16.8 0.2 0.004 16.5 0.2 1.1 1 0 0 1 1 1 1 Collagenase ASC PF00858.24 NODE_57633_length_293_cov_0.992248_g49694_i0forward_frame_1 - 0.028 13.4 0.2 0.034 13.1 0.2 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel Methyltransf_5 PF01795.19 NODE_57624_length_293_cov_1.476744_g49685_i0forward_frame_1 - 3.3e-17 63.0 0.5 3.6e-17 62.8 0.5 1.0 1 0 0 1 1 1 1 MraW methylase family PCYCGC PF13798.6 NODE_57622_length_293_cov_1.608527_g49683_i0forward_frame_1 - 0.11 12.4 0.4 0.12 12.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function with PCYCGC motif DUF4860 PF16152.5 NODE_57621_length_293_cov_1.620155_g49682_i0forward_frame_1 - 0.039 13.8 0.4 0.055 13.3 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4860) FAST_2 PF08368.12 NODE_57617_length_293_cov_1.794574_g49678_i0reverse_frame_1 - 0.53 11.1 3.0 0.51 11.2 1.3 1.7 1 1 1 2 2 2 0 FAST kinase-like protein, subdomain 2 Fib_alpha PF08702.10 NODE_57615_length_293_cov_1.837209_g49676_i0reverse_frame_1 - 0.021 15.0 0.1 0.024 14.8 0.1 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Ferlin_C PF16165.5 NODE_57613_length_293_cov_1.856589_g49674_i0reverse_frame_1 - 0.55 10.2 2.2 0.74 9.8 2.2 1.3 1 0 0 1 1 1 0 Ferlin C-terminus Claudin_2 PF13903.6 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.0078 16.0 2.6 0.0086 15.9 2.6 1.1 1 0 0 1 1 1 1 PMP-22/EMP/MP20/Claudin tight junction DUF1700 PF08006.11 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.033 13.7 7.1 0.033 13.7 7.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) TMEM154 PF15102.6 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.033 14.1 3.4 0.042 13.7 3.4 1.3 1 0 0 1 1 1 0 TMEM154 protein family Stevor PF17410.2 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.1 12.1 2.8 0.12 11.9 2.8 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF3404 PF11884.8 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 0.36 10.0 0.6 0.4 9.9 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) DUF2207 PF09972.9 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 1.1 8.0 2.7 1.1 7.9 2.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Amnionless PF14828.6 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 1.1 8.0 3.2 1.2 7.9 3.2 1.1 1 0 0 1 1 1 0 Amnionless Shisa PF13908.6 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_1 - 1.8 8.8 5.6 2.4 8.4 5.6 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator EIID-AGA PF03613.14 NODE_57596_length_293_cov_2.248062_g49657_i0reverse_frame_1 - 7.4e-33 113.9 0.0 8.2e-33 113.7 0.0 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component Paired_CXXCH_1 PF09699.10 NODE_57591_length_293_cov_2.403101_g49652_i0forward_frame_1 - 0.048 13.4 0.2 0.074 12.8 0.2 1.3 1 0 0 1 1 1 0 Doubled CXXCH motif (Paired_CXXCH_1) DUF4049 PF13258.6 NODE_57590_length_293_cov_2.465116_g49651_i0forward_frame_1 - 1.9e-52 178.4 0.0 2e-52 178.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4049) FimH_man-bind PF09160.10 NODE_57589_length_293_cov_2.468992_g49650_i0reverse_frame_1 - 4.5e-46 156.1 0.1 4.9e-46 156.0 0.1 1.0 1 0 0 1 1 1 1 FimH, mannose binding Bacillus_HBL PF05791.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.022 14.6 2.9 0.029 14.2 2.9 1.2 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) DUF4407 PF14362.6 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.025 14.0 8.0 0.025 13.9 8.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TACC_C PF05010.14 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.025 14.4 8.8 0.044 13.6 8.8 1.5 1 1 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Atg14 PF10186.9 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.036 13.2 3.2 0.038 13.1 3.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DASH_Dam1 PF08653.10 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.039 13.7 0.7 8.3 6.3 0.1 2.5 2 1 0 2 2 2 0 DASH complex subunit Dam1 Val_tRNA-synt_C PF10458.9 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.049 13.9 7.7 1.1 9.5 2.7 2.4 2 0 0 2 2 2 0 Valyl tRNA synthetase tRNA binding arm DUF4618 PF15397.6 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.052 13.0 6.8 0.069 12.6 6.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) OmpH PF03938.14 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.053 13.9 11.1 0.067 13.5 11.1 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Lebercilin PF15619.6 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.058 13.1 7.0 0.085 12.5 7.0 1.3 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease GvpL_GvpF PF06386.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.11 12.5 4.9 0.12 12.3 4.9 1.1 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF AcylCoA_dehyd_C PF12186.8 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.15 12.2 3.4 2.1 8.5 0.3 2.1 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase C terminal Fib_alpha PF08702.10 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.19 11.9 2.5 2.9 8.1 0.2 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.28 10.0 8.7 0.35 9.7 8.7 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Trimer_CC PF08954.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.29 10.7 3.7 0.12 11.9 1.3 1.6 2 0 0 2 2 2 0 Trimerisation motif HIP1_clath_bdg PF16515.5 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.33 11.6 10.2 0.77 10.4 0.5 2.0 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CCDC74_C PF14917.6 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 0.45 11.0 3.8 0.43 11.1 0.4 1.9 2 0 0 2 2 2 0 Coiled coil protein 74, C terminal DUF1690 PF07956.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 1 9.8 9.1 1.7 9.1 9.1 1.4 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) FlaC_arch PF05377.11 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 1.4 9.4 8.0 2.9 8.3 1.2 2.6 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DivIC PF04977.15 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 1.5 8.6 10.6 8.1 6.3 4.6 2.2 2 0 0 2 2 2 0 Septum formation initiator TMPIT PF07851.13 NODE_57588_length_293_cov_2.476744_g49649_i0reverse_frame_1 - 3.8 6.7 4.9 4.2 6.5 4.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein Sterol_MT_C PF08498.10 NODE_57568_length_293_cov_3.875969_g49629_i0reverse_frame_1 - 0.11 12.8 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Sterol methyltransferase C-terminal IQ PF00612.27 NODE_57566_length_293_cov_3.906977_g49627_i0reverse_frame_1 - 0.039 13.7 0.4 0.073 12.9 0.4 1.5 1 0 0 1 1 1 0 IQ calmodulin-binding motif Ribosomal_L36 PF00444.18 NODE_57566_length_293_cov_3.906977_g49627_i0forward_frame_1 - 4.1e-14 52.5 2.3 4.1e-14 52.5 2.3 1.6 2 0 0 2 2 2 1 Ribosomal protein L36 Vma12 PF11712.8 NODE_57565_length_293_cov_3.906977_g49626_i0reverse_frame_1 - 0.15 12.2 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Mqo PF06039.15 NODE_57560_length_293_cov_26.166667_g49621_i0reverse_frame_1 - 0.039 12.5 0.0 0.04 12.5 0.0 1.1 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) EF-hand_4 PF12763.7 NODE_57560_length_293_cov_26.166667_g49621_i0reverse_frame_1 - 0.05 13.6 0.2 0.096 12.7 0.2 1.6 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand GON PF08685.11 NODE_57559_length_293_cov_28.658915_g49620_i0reverse_frame_1 - 0.019 14.8 0.3 0.021 14.7 0.3 1.4 1 1 0 1 1 1 0 GON domain DUF1247 PF06851.11 NODE_57557_length_293_cov_34.531008_g49618_i0reverse_frame_1 - 0.06 13.3 0.5 0.068 13.1 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) TssO PF17561.2 NODE_57547_length_293_cov_56.631783_g49608_i0forward_frame_1 - 0.011 15.9 3.0 0.013 15.6 3.0 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssO Nucleoside_tran PF01733.18 NODE_57547_length_293_cov_56.631783_g49608_i0forward_frame_1 - 0.057 12.8 0.1 0.059 12.7 0.1 1.0 1 0 0 1 1 1 0 Nucleoside transporter Ycf70 PF17382.2 NODE_57547_length_293_cov_56.631783_g49608_i0forward_frame_1 - 0.071 13.5 0.9 0.37 11.2 0.4 1.9 1 1 1 2 2 2 0 Uncharacterized Ycf70-like DUF5583 PF17821.1 NODE_57545_length_293_cov_60.426357_g49606_i0reverse_frame_1 - 0.19 11.7 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5583) DUF627 PF04781.12 NODE_57536_length_293_cov_83.519380_g49597_i0reverse_frame_1 - 0.12 12.4 0.1 0.2 11.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF627) YcgR_2 PF12945.7 NODE_57534_length_293_cov_87.248062_g49595_i0reverse_frame_1 - 0.066 13.4 0.2 0.08 13.1 0.2 1.1 1 0 0 1 1 1 0 Flagellar protein YcgR FNIP PF05725.12 NODE_57533_length_293_cov_98.286822_g49594_i0reverse_frame_1 - 1.2e-13 51.0 4.3 1.2e-10 41.4 0.8 2.1 1 1 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_57533_length_293_cov_98.286822_g49594_i0reverse_frame_1 - 0.089 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) WBP-1 PF11669.8 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_1 - 0.054 14.1 0.1 0.066 13.9 0.1 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 TssO PF17561.2 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_1 - 0.073 13.2 5.7 0.064 13.4 3.2 1.8 1 1 1 2 2 2 0 Type VI secretion system, TssO ResB PF05140.14 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_1 - 0.088 11.5 0.2 0.092 11.5 0.2 1.0 1 0 0 1 1 1 0 ResB-like family RITA PF17066.5 NODE_57527_length_293_cov_120.162791_g49588_i0reverse_frame_1 - 0.036 13.7 0.4 0.037 13.6 0.4 1.0 1 0 0 1 1 1 0 RBPJ-interacting and tubulin associated protein CBP4 PF07960.11 NODE_57521_length_293_cov_211.550388_g49582_i0reverse_frame_1 - 0.059 13.2 2.0 0.08 12.8 2.0 1.2 1 1 0 1 1 1 0 CBP4 DUF5478 PF17572.2 NODE_57519_length_293_cov_325.325581_g49580_i0reverse_frame_1 - 0.16 12.1 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5478) Toxin_13 PF07822.11 NODE_57513_length_294_cov_0.926641_g49574_i0forward_frame_1 - 0.0086 16.2 2.8 0.0086 16.2 2.8 2.2 2 0 0 2 2 2 1 Neurotoxin B-IV-like protein Opy2 PF09463.10 NODE_57513_length_294_cov_0.926641_g49574_i0forward_frame_1 - 6.1 7.2 9.4 0.6 10.5 1.3 2.3 2 0 0 2 2 2 0 Opy2 protein S10_plectin PF03501.15 NODE_57511_length_294_cov_1.131274_g49572_i0reverse_frame_1 - 0.046 13.8 0.0 0.058 13.5 0.0 1.2 1 0 0 1 1 1 0 Plectin/S10 domain Rrf2 PF02082.20 NODE_57509_length_294_cov_1.274131_g49570_i0forward_frame_1 - 0.00011 22.5 0.0 0.00015 22.1 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HHH_7 PF14635.6 NODE_57509_length_294_cov_1.274131_g49570_i0forward_frame_1 - 0.074 13.4 0.1 0.094 13.1 0.1 1.2 1 0 0 1 1 1 0 Helix-hairpin-helix motif HTH_IclR PF09339.10 NODE_57509_length_294_cov_1.274131_g49570_i0forward_frame_1 - 0.1 12.4 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Phage_int_SAM_1 PF02899.17 NODE_57507_length_294_cov_1.343629_g49568_i0reverse_frame_1 - 0.0071 16.6 0.3 0.0096 16.2 0.3 1.2 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 NODE_57507_length_294_cov_1.343629_g49568_i0reverse_frame_1 - 0.05 14.1 0.0 0.062 13.8 0.0 1.2 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Methylase_S PF01420.19 NODE_57506_length_294_cov_1.374517_g49567_i0reverse_frame_1 - 0.024 14.9 1.0 0.027 14.7 1.0 1.1 1 0 0 1 1 1 0 Type I restriction modification DNA specificity domain Axin_b-cat_bind PF08833.10 NODE_57502_length_294_cov_1.389961_g49563_i0reverse_frame_1 - 0.01 15.9 1.2 0.018 15.1 1.2 1.5 1 0 0 1 1 1 0 Axin beta-catenin binding domain YpzG PF14139.6 NODE_57498_length_294_cov_1.451737_g49559_i0forward_frame_1 - 0.075 13.2 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 YpzG-like protein Spermine_synth PF01564.17 NODE_57493_length_294_cov_1.501931_g49554_i0reverse_frame_1 - 0.076 12.4 0.5 0.19 11.1 0.2 1.7 1 1 1 2 2 2 0 Spermine/spermidine synthase domain MORN PF02493.20 NODE_57492_length_294_cov_1.517375_g49553_i0reverse_frame_1 - 0.0019 18.0 13.8 0.081 12.8 2.5 3.4 3 0 0 3 3 3 3 MORN repeat DUF3667 PF12412.8 NODE_57490_length_294_cov_1.525097_g49551_i0reverse_frame_1 - 0.085 12.4 0.3 0.14 11.7 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) Sec62 PF03839.16 NODE_57471_length_294_cov_2.135135_g49532_i0forward_frame_1 - 0.035 13.6 1.2 0.046 13.2 1.2 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 IspA PF04279.15 NODE_57462_length_294_cov_2.189189_g49523_i0forward_frame_1 - 7e-41 140.3 9.3 7.6e-41 140.2 9.3 1.0 1 0 0 1 1 1 1 Intracellular septation protein A DUF4181 PF13789.6 NODE_57461_length_294_cov_2.212355_g49522_i0reverse_frame_1 - 0.01 16.1 3.5 0.012 15.8 3.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) FA_hydroxylase PF04116.13 NODE_57461_length_294_cov_2.212355_g49522_i0reverse_frame_1 - 0.11 12.8 1.0 0.14 12.5 1.0 1.1 1 0 0 1 1 1 0 Fatty acid hydroxylase superfamily DUF4834 PF16118.5 NODE_57461_length_294_cov_2.212355_g49522_i0forward_frame_1 - 0.078 13.9 0.6 0.11 13.5 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Acyltransferase PF01553.21 NODE_57452_length_294_cov_2.702703_g49513_i0reverse_frame_1 - 0.013 15.1 0.4 0.033 13.8 0.2 1.7 1 1 1 2 2 2 0 Acyltransferase GDE_C PF06202.14 NODE_57439_length_294_cov_26.737452_g49500_i0reverse_frame_1 - 0.012 14.5 0.1 0.016 14.1 0.1 1.2 1 0 0 1 1 1 0 Amylo-alpha-1,6-glucosidase Orbi_NS3 PF01616.16 NODE_57432_length_294_cov_53.949807_g49493_i0reverse_frame_1 - 0.14 11.8 0.1 0.17 11.5 0.1 1.1 1 0 0 1 1 1 0 Orbivirus NS3 PPR PF01535.20 NODE_57429_length_294_cov_54.961390_g49490_i0reverse_frame_1 - 0.00027 21.0 0.0 0.0021 18.2 0.0 2.0 2 0 0 2 2 2 1 PPR repeat PPR_2 PF13041.6 NODE_57429_length_294_cov_54.961390_g49490_i0reverse_frame_1 - 0.015 15.5 0.0 0.038 14.2 0.0 1.6 1 1 1 2 2 2 0 PPR repeat family Popeye PF04831.13 NODE_57424_length_294_cov_60.749035_g49485_i0forward_frame_1 - 3 8.0 9.4 3.3 7.9 9.4 1.1 1 0 0 1 1 1 0 Popeye protein conserved region eIF-3_zeta PF05091.12 NODE_57422_length_294_cov_63.185328_g49483_i0reverse_frame_1 - 0.38 9.7 3.4 0.38 9.7 3.4 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Med4 PF10018.9 NODE_57418_length_294_cov_72.092664_g49479_i0reverse_frame_1 - 0.034 13.8 1.1 0.04 13.6 1.1 1.0 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF2536 PF10750.9 NODE_57418_length_294_cov_72.092664_g49479_i0reverse_frame_1 - 0.035 14.0 0.5 0.058 13.3 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2536) Melibiase PF02065.18 NODE_57402_length_294_cov_130.795367_g49463_i0reverse_frame_1 - 0.062 12.3 0.0 0.07 12.1 0.0 1.0 1 0 0 1 1 1 0 Melibiase zinc_ribbon_2 PF13240.6 NODE_57401_length_294_cov_163.861004_g49462_i0forward_frame_1 - 0.025 14.3 0.6 0.049 13.4 0.6 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Nkap_C PF06047.11 NODE_57401_length_294_cov_163.861004_g49462_i0forward_frame_1 - 0.077 13.1 0.0 0.12 12.5 0.0 1.4 1 1 0 1 1 1 0 NF-kappa-B-activating protein C-terminal domain Pox_E10 PF04805.12 NODE_57394_length_294_cov_1286.069498_g49455_i0forward_frame_1 - 1.5 8.7 4.6 2.9 7.8 4.6 1.5 1 0 0 1 1 1 0 E10-like protein conserved region Cytochrom_B559 PF00283.19 NODE_57391_length_294_cov_2661.181467_g49452_i0forward_frame_1 - 2.1e-14 52.6 5.4 3e-14 52.1 5.4 1.3 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits AAA_7 PF12775.7 NODE_57383_length_295_cov_1.365385_g49444_i0forward_frame_3 - 0.027 14.0 0.1 0.034 13.6 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region TPR_12 PF13424.6 NODE_57383_length_295_cov_1.365385_g49444_i0forward_frame_2 - 0.00016 21.9 0.4 0.064 13.6 0.1 1.8 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_57383_length_295_cov_1.365385_g49444_i0forward_frame_2 - 0.032 14.4 1.1 0.24 11.7 0.8 2.4 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_57383_length_295_cov_1.365385_g49444_i0forward_frame_2 - 0.12 12.6 0.3 0.27 11.5 0.3 1.7 1 1 0 1 1 1 0 Tetratricopeptide repeat Pkinase PF00069.25 NODE_57382_length_295_cov_1.380769_g49443_i0reverse_frame_3 - 6e-12 45.5 0.0 7.1e-12 45.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57382_length_295_cov_1.380769_g49443_i0reverse_frame_3 - 1.1e-08 34.7 0.0 1.4e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_57382_length_295_cov_1.380769_g49443_i0reverse_frame_3 - 0.0025 17.2 0.0 0.0031 16.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Ssl1 PF04056.14 NODE_57382_length_295_cov_1.380769_g49443_i0reverse_frame_3 - 0.085 12.7 0.0 0.093 12.5 0.0 1.0 1 0 0 1 1 1 0 Ssl1-like Lamprin PF06403.11 NODE_57379_length_295_cov_1.450000_g49440_i0forward_frame_2 - 7.6 6.5 10.2 1.1 9.2 5.9 1.9 1 1 1 2 2 2 0 Lamprin ABC_tran PF00005.27 NODE_57378_length_295_cov_1.457692_g49439_i0reverse_frame_3 - 0.00015 22.3 0.0 0.00017 22.1 0.0 1.0 1 0 0 1 1 1 1 ABC transporter CIMR PF00878.18 NODE_57377_length_295_cov_1.492308_g49438_i0forward_frame_2 - 0.075 13.1 0.3 0.097 12.7 0.3 1.1 1 0 0 1 1 1 0 Cation-independent mannose-6-phosphate receptor repeat DUF2967 PF11179.8 NODE_57374_length_295_cov_1.580769_g49435_i0reverse_frame_2 - 0.43 8.6 5.8 0.47 8.5 5.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2967) PHM7_cyt PF14703.6 NODE_57373_length_295_cov_1.642308_g49434_i0reverse_frame_2 - 0.032 14.5 1.7 0.035 14.3 1.7 1.1 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter RNA_pol_Rpb1_R PF05001.13 NODE_57370_length_295_cov_1.726923_g49431_i0reverse_frame_2 - 1.1 9.8 3.9 6.4 7.3 0.2 2.5 3 0 0 3 3 3 0 RNA polymerase Rpb1 C-terminal repeat Ribosomal_L30 PF00327.20 NODE_57370_length_295_cov_1.726923_g49431_i0reverse_frame_2 - 5 7.1 6.4 5.9 6.9 0.7 2.2 1 1 1 2 2 2 0 Ribosomal protein L30p/L7e Imm50 PF15594.6 NODE_57368_length_295_cov_1.738462_g49429_i0reverse_frame_3 - 0.061 13.5 0.0 0.079 13.2 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 50 NDUF_B6 PF09782.9 NODE_57368_length_295_cov_1.738462_g49429_i0forward_frame_2 - 0.26 11.4 0.7 0.31 11.2 0.7 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit DUF4637 PF15470.6 NODE_57367_length_295_cov_1.842308_g49428_i0reverse_frame_2 - 0.019 14.7 0.7 0.022 14.5 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) MMTV_SAg PF01054.17 NODE_57366_length_295_cov_1.846154_g49427_i0reverse_frame_3 - 0.024 14.2 0.4 0.066 12.7 0.0 1.7 1 1 1 2 2 2 0 Mouse mammary tumour virus superantigen DUF4321 PF14209.6 NODE_57364_length_295_cov_1.884615_g49425_i0forward_frame_3 - 0.072 12.9 0.6 0.072 12.9 0.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4321) DUF4937 PF16291.5 NODE_57363_length_295_cov_1.892308_g49424_i0reverse_frame_2 - 0.097 12.9 0.1 0.19 12.0 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4937 WD40 PF00400.32 NODE_57363_length_295_cov_1.892308_g49424_i0forward_frame_2 - 5.1e-05 23.9 0.1 0.27 12.2 0.0 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF5504 PF17608.2 NODE_57363_length_295_cov_1.892308_g49424_i0forward_frame_2 - 0.0099 16.0 0.7 0.082 13.0 0.7 2.0 1 1 0 1 1 1 1 Family of unknown function (DUF5504) TMEM154 PF15102.6 NODE_57362_length_295_cov_1.942308_g49423_i0reverse_frame_3 - 0.0055 16.6 0.7 0.0068 16.3 0.7 1.1 1 0 0 1 1 1 1 TMEM154 protein family Renin_r PF07850.14 NODE_57362_length_295_cov_1.942308_g49423_i0reverse_frame_3 - 0.049 14.2 0.2 0.054 14.1 0.2 1.1 1 0 0 1 1 1 0 Renin receptor-like protein Chromadorea_ALT PF05535.12 NODE_57361_length_295_cov_2.034615_g49422_i0reverse_frame_2 - 0.022 14.9 0.3 0.034 14.3 0.3 1.3 1 0 0 1 1 1 0 Chromadorea ALT protein DUF5463 PF17551.2 NODE_57361_length_295_cov_2.034615_g49422_i0reverse_frame_2 - 0.037 13.9 0.4 0.093 12.6 0.4 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5463) DUF1473 PF07341.11 NODE_57361_length_295_cov_2.034615_g49422_i0forward_frame_3 - 0.095 12.5 0.3 0.1 12.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1473) AAA_25 PF13481.6 NODE_57357_length_295_cov_2.115385_g49418_i0reverse_frame_3 - 0.096 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF4619 PF15398.6 NODE_57357_length_295_cov_2.115385_g49418_i0forward_frame_3 - 0.071 12.6 0.2 0.08 12.4 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4619) zf-NF-X1 PF01422.17 NODE_57357_length_295_cov_2.115385_g49418_i0forward_frame_2 - 0.07 13.2 1.0 0.14 12.2 1.0 1.5 1 0 0 1 1 1 0 NF-X1 type zinc finger DnaJ PF00226.31 NODE_57352_length_295_cov_2.180769_g49413_i0reverse_frame_2 - 6.3e-14 51.9 0.0 8.3e-14 51.5 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain Nodulin_late PF07127.11 NODE_57351_length_295_cov_2.269231_g49412_i0reverse_frame_2 - 0.24 11.8 0.3 0.24 11.8 0.3 2.5 2 1 1 3 3 3 0 Late nodulin protein DUF1430 PF07242.11 NODE_57349_length_295_cov_2.415385_g49410_i0reverse_frame_3 - 0.075 13.3 1.9 0.1 12.8 1.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) DUF3624 PF12292.8 NODE_57347_length_295_cov_2.550000_g49408_i0reverse_frame_3 - 0.14 12.6 2.1 0.18 12.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3624) RcnB PF11776.8 NODE_57346_length_295_cov_2.557692_g49407_i0reverse_frame_2 - 0.066 13.3 0.1 12 6.0 0.0 2.4 2 0 0 2 2 2 0 Nickel/cobalt transporter regulator HUN PF08729.10 NODE_57346_length_295_cov_2.557692_g49407_i0reverse_frame_2 - 3.2 7.8 9.0 16 5.6 0.0 2.5 2 1 0 2 2 2 0 HPC2 and ubinuclein domain LPD3 PF18798.1 NODE_57344_length_295_cov_2.623077_g49405_i0reverse_frame_3 - 0.075 13.3 3.9 0.11 12.7 3.9 1.4 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 3 DUF1298 PF06974.13 NODE_57343_length_295_cov_2.653846_g49404_i0forward_frame_2 - 4e-05 23.6 0.0 4.8e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) XRN_M PF17846.1 NODE_57339_length_295_cov_2.800000_g49400_i0forward_frame_3 - 6.6e-39 134.1 2.3 7.7e-39 133.9 2.3 1.0 1 0 0 1 1 1 1 Xrn1 helical domain zf-3CxxC PF13695.6 NODE_57339_length_295_cov_2.800000_g49400_i0forward_frame_2 - 0.098 13.1 1.1 0.12 12.9 1.1 1.1 1 0 0 1 1 1 0 Zinc-binding domain DUF443 PF04276.12 NODE_57338_length_295_cov_2.838462_g49399_i0forward_frame_3 - 0.53 10.1 7.2 0.65 9.8 7.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF443) PilJ PF13675.6 NODE_57337_length_295_cov_2.857692_g49398_i0forward_frame_2 - 1.9e-15 56.9 0.3 2.6e-15 56.5 0.3 1.1 1 0 0 1 1 1 1 Type IV pili methyl-accepting chemotaxis transducer N-term LRRNT PF01462.18 NODE_57336_length_295_cov_2.957692_g49397_i0reverse_frame_3 - 0.04 13.6 0.1 0.097 12.4 0.1 1.6 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain DUF1196 PF06709.11 NODE_57334_length_295_cov_3.053846_g49395_i0forward_frame_2 - 0.27 11.4 2.0 0.49 10.6 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1196) CC PF04942.14 NODE_57334_length_295_cov_3.053846_g49395_i0forward_frame_2 - 0.81 9.9 4.0 3.4 8.0 0.1 2.9 3 0 0 3 3 3 0 CC domain Pkinase PF00069.25 NODE_57330_length_295_cov_3.450000_g49391_i0forward_frame_3 - 1.3e-14 54.2 0.0 1.5e-14 54.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57330_length_295_cov_3.450000_g49391_i0forward_frame_3 - 9.9e-08 31.6 0.0 1.2e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4345 PF14248.6 NODE_57329_length_295_cov_4.119231_g49390_i0reverse_frame_3 - 0.09 12.7 0.2 0.16 11.8 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4345) Stomagen PF16851.5 NODE_57329_length_295_cov_4.119231_g49390_i0forward_frame_3 - 2.1 8.4 12.4 14 5.7 12.4 2.1 1 1 0 1 1 1 0 Stomagen PCSK9_C1 PF18459.1 NODE_57327_length_295_cov_7.126923_g49388_i0forward_frame_2 - 0.0056 16.8 0.8 0.0079 16.3 0.8 1.3 1 0 0 1 1 1 1 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain VAR1 PF05316.12 NODE_57325_length_295_cov_25.292308_g49386_i0forward_frame_3 - 0.041 12.9 3.1 0.043 12.9 3.1 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein (VAR1) DUF4788 PF16032.5 NODE_57324_length_295_cov_30.034615_g49385_i0forward_frame_2 - 0.024 13.6 0.0 0.028 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4788) VP4_helical PF17478.2 NODE_57319_length_295_cov_48.430769_g49380_i0reverse_frame_2 - 1.6 8.1 5.7 1.8 7.9 5.7 1.0 1 0 0 1 1 1 0 Rotavirus VP4 helical domain DUF4715 PF15835.5 NODE_57319_length_295_cov_48.430769_g49380_i0forward_frame_2 - 0.2 11.7 12.1 0.29 11.2 6.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4715) Comm PF15957.5 NODE_57318_length_295_cov_51.076923_g49379_i0reverse_frame_3 - 2.8 8.3 6.0 3.1 8.2 6.0 1.2 1 0 0 1 1 1 0 Commissureless DUF4253 PF14062.6 NODE_57318_length_295_cov_51.076923_g49379_i0reverse_frame_2 - 0.14 12.3 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) Pkinase PF00069.25 NODE_57316_length_295_cov_55.180769_g49377_i0reverse_frame_3 - 7.6e-05 22.2 0.0 9.4e-05 21.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain MTABC_N PF16185.5 NODE_57316_length_295_cov_55.180769_g49377_i0forward_frame_2 - 0.037 13.5 2.4 0.046 13.2 2.4 1.0 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region Pro_CA PF00484.19 NODE_57312_length_295_cov_57.565385_g49373_i0reverse_frame_3 - 4.6e-06 27.0 0.1 6.8e-06 26.5 0.1 1.2 1 0 0 1 1 1 1 Carbonic anhydrase Dicty_CAD PF05720.12 NODE_57312_length_295_cov_57.565385_g49373_i0reverse_frame_3 - 0.082 12.9 0.0 0.19 11.7 0.0 1.5 1 1 0 1 1 1 0 Cell-cell adhesion domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks271.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks271.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks271.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks271.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:15 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TCRP1 PF14944.6 NODE_57309_length_295_cov_61.238462_g49370_i0reverse_frame_3 - 0.065 13.2 0.2 0.085 12.8 0.2 1.1 1 0 0 1 1 1 0 Tongue Cancer Chemotherapy Resistant Protein 1 Cyt-b5 PF00173.28 NODE_57308_length_295_cov_62.488462_g49369_i0reverse_frame_3 - 6.1e-05 23.1 0.0 9.2e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain TMEM51 PF15345.6 NODE_57306_length_295_cov_67.807692_g49367_i0forward_frame_3 - 0.21 11.4 3.1 0.26 11.1 3.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 RBP_receptor PF14752.6 NODE_57305_length_295_cov_68.123077_g49366_i0reverse_frame_2 - 0.24 10.0 0.2 0.29 9.7 0.2 1.1 1 0 0 1 1 1 0 Retinol binding protein receptor zf-C2H2_2 PF12756.7 NODE_57303_length_295_cov_74.942308_g49364_i0forward_frame_3 - 0.11 12.8 0.2 0.15 12.4 0.2 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Adeno_E4 PF05385.11 NODE_57301_length_295_cov_75.950000_g49362_i0reverse_frame_3 - 0.062 13.4 0.4 0.084 13.0 0.4 1.2 1 0 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein RCC1_2 PF13540.6 NODE_57299_length_295_cov_77.438462_g49360_i0forward_frame_2 - 2.9e-05 23.7 1.8 0.12 12.2 0.0 2.8 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_57299_length_295_cov_77.438462_g49360_i0forward_frame_2 - 0.062 13.4 0.2 3.6 7.7 0.0 2.1 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 DpnD-PcfM PF14207.6 NODE_57299_length_295_cov_77.438462_g49360_i0forward_frame_2 - 0.21 11.5 0.3 12 5.9 0.1 2.1 2 0 0 2 2 2 0 DpnD/PcfM-like protein PheRS_DBD2 PF18554.1 NODE_57299_length_295_cov_77.438462_g49360_i0forward_frame_2 - 0.3 11.1 6.7 5 7.2 0.7 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Nuc_H_symport PF03825.16 NODE_57297_length_295_cov_82.561538_g49358_i0forward_frame_2 - 0.014 14.5 2.5 0.015 14.3 2.5 1.0 1 0 0 1 1 1 0 Nucleoside H+ symporter DUF420 PF04238.12 NODE_57293_length_295_cov_93.165385_g49354_i0reverse_frame_2 - 0.012 15.9 1.5 0.014 15.7 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF420) DUF2379 PF09543.10 NODE_57288_length_295_cov_144.700000_g49349_i0reverse_frame_3 - 0.068 13.4 0.2 0.091 13.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2379) E1_UFD PF09358.10 NODE_57285_length_295_cov_183.765385_g49346_i0reverse_frame_2 - 0.083 13.6 2.0 0.21 12.3 0.9 1.9 1 1 0 2 2 2 0 Ubiquitin fold domain IncE PF17627.2 NODE_57285_length_295_cov_183.765385_g49346_i0forward_frame_3 - 0.15 12.0 2.5 0.16 12.0 2.0 1.3 1 1 0 1 1 1 0 Inclusion membrane protein E eIF-4B PF06273.11 NODE_57280_length_295_cov_246.334615_g49341_i0reverse_frame_2 - 0.099 11.7 0.1 0.12 11.4 0.1 1.1 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B TMEM132D_C PF15706.5 NODE_57279_length_295_cov_309.357692_g49340_i0reverse_frame_3 - 0.037 13.8 0.5 0.19 11.5 0.5 1.9 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term XTBD PF11952.8 NODE_57276_length_295_cov_394.415385_g49337_i0reverse_frame_2 - 0.032 14.0 0.2 0.039 13.7 0.2 1.3 1 0 0 1 1 1 0 XRN-Two Binding Domain, XTBD BicD PF09730.9 NODE_57276_length_295_cov_394.415385_g49337_i0forward_frame_2 - 0.00072 18.1 0.6 0.00075 18.1 0.6 1.0 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D SKA1 PF07160.12 NODE_57276_length_295_cov_394.415385_g49337_i0forward_frame_2 - 0.0018 18.2 1.4 0.0018 18.2 1.4 1.0 1 0 0 1 1 1 1 Spindle and kinetochore-associated protein 1 CENP-F_leu_zip PF10473.9 NODE_57276_length_295_cov_394.415385_g49337_i0forward_frame_2 - 0.01 15.8 4.9 0.013 15.5 4.9 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4226 PF10774.9 NODE_57276_length_295_cov_394.415385_g49337_i0forward_frame_2 - 0.011 16.0 6.5 0.013 15.8 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4226) TEX13 PF15186.6 NODE_57276_length_295_cov_394.415385_g49337_i0forward_frame_2 - 0.035 13.8 7.0 0.047 13.4 7.0 1.2 1 0 0 1 1 1 0 Testis-expressed sequence 13 protein family UPF0242 PF06785.11 NODE_57276_length_295_cov_394.415385_g49337_i0forward_frame_2 - 0.23 11.5 6.1 0.29 11.2 6.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CLN3 PF02487.17 NODE_57276_length_295_cov_394.415385_g49337_i0forward_frame_2 - 0.33 9.9 1.0 0.34 9.9 1.0 1.0 1 0 0 1 1 1 0 CLN3 protein DUF3450 PF11932.8 NODE_57276_length_295_cov_394.415385_g49337_i0forward_frame_2 - 0.52 9.6 8.7 0.63 9.3 8.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF773 PF05600.12 NODE_57276_length_295_cov_394.415385_g49337_i0forward_frame_2 - 1 8.0 7.6 1.2 7.7 7.6 1.0 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 BRX PF08381.11 NODE_57274_length_295_cov_844.026923_g49335_i0reverse_frame_2 - 0.035 13.5 0.0 0.056 12.8 0.0 1.2 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 MFS_1 PF07690.16 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_3 - 7.8e-09 34.9 5.7 9.3e-09 34.7 5.7 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_3 - 3.3e-05 22.9 2.8 4e-05 22.6 2.4 1.4 1 1 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_3 - 0.0023 16.9 2.9 0.0025 16.8 2.9 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter Pam17 PF08566.10 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_3 - 0.3 10.9 0.5 0.45 10.3 0.3 1.3 1 1 0 1 1 1 0 Mitochondrial import protein Pam17 CcdA PF07362.12 NODE_57269_length_296_cov_0.969349_g49330_i0reverse_frame_2 - 0.034 14.6 0.1 0.049 14.1 0.1 1.2 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA RRN3 PF05327.11 NODE_57269_length_296_cov_0.969349_g49330_i0forward_frame_2 - 0.0044 15.6 0.2 0.0053 15.4 0.2 1.1 1 0 0 1 1 1 1 RNA polymerase I specific transcription initiation factor RRN3 Aa_trans PF01490.18 NODE_57264_length_296_cov_1.226054_g49325_i0reverse_frame_3 - 0.026 13.3 0.1 0.027 13.2 0.1 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Endothelin PF00322.17 NODE_57263_length_296_cov_1.283525_g49324_i0reverse_frame_3 - 0.098 12.3 1.3 0.098 12.3 1.3 2.3 2 0 0 2 2 2 0 Endothelin family DUF5456 PF17539.2 NODE_57262_length_296_cov_1.291188_g49323_i0reverse_frame_2 - 0.085 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5456) Palm_thioest PF02089.15 NODE_57262_length_296_cov_1.291188_g49323_i0forward_frame_3 - 0.0023 17.8 0.0 0.0025 17.7 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase CPL PF08144.11 NODE_57262_length_296_cov_1.291188_g49323_i0forward_frame_3 - 0.018 15.4 0.0 0.021 15.2 0.0 1.1 1 0 0 1 1 1 0 CPL (NUC119) domain RE_CfrBI PF09516.10 NODE_57262_length_296_cov_1.291188_g49323_i0forward_frame_2 - 0.075 12.4 0.0 0.08 12.3 0.0 1.0 1 0 0 1 1 1 0 CfrBI restriction endonuclease Roc PF08477.13 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_2 - 1.9e-07 31.3 0.1 2.5e-07 30.9 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_57261_length_296_cov_1.295019_g49322_i0reverse_frame_2 - 6e-07 29.2 0.1 7.9e-07 28.8 0.1 1.4 1 1 0 1 1 1 1 Ras family Oest_recep PF02159.15 NODE_57260_length_296_cov_1.306513_g49321_i0forward_frame_2 - 0.039 14.4 2.3 0.048 14.1 1.0 1.6 1 1 1 2 2 2 0 Oestrogen receptor DUF327 PF03885.13 NODE_57259_length_296_cov_1.310345_g49320_i0reverse_frame_2 - 0.027 14.4 1.3 0.034 14.1 1.3 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF327) Mem_trans PF03547.18 NODE_57259_length_296_cov_1.310345_g49320_i0forward_frame_2 - 0.18 10.2 2.9 0.2 10.0 2.9 1.1 1 0 0 1 1 1 0 Membrane transport protein Bunya_G2 PF03563.13 NODE_57259_length_296_cov_1.310345_g49320_i0forward_frame_2 - 1.4 8.1 10.8 1.5 8.0 10.8 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 CTX_RstB PF07459.11 NODE_57258_length_296_cov_1.321839_g49319_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 CTX phage RstB protein Perilipin PF03036.16 NODE_57258_length_296_cov_1.321839_g49319_i0forward_frame_2 - 0.041 12.9 0.0 0.048 12.7 0.0 1.0 1 0 0 1 1 1 0 Perilipin family TerY_C PF15616.6 NODE_57256_length_296_cov_1.425287_g49317_i0reverse_frame_2 - 0.014 15.5 0.4 0.016 15.3 0.4 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain zf-B_box PF00643.24 NODE_57256_length_296_cov_1.425287_g49317_i0reverse_frame_2 - 0.019 15.1 0.8 0.042 14.0 0.8 1.6 1 0 0 1 1 1 0 B-box zinc finger Afaf PF15339.6 NODE_57253_length_296_cov_1.532567_g49314_i0reverse_frame_2 - 5.1 6.8 8.7 6.8 6.3 8.7 1.2 1 0 0 1 1 1 0 Acrosome formation-associated factor EbsA PF17255.2 NODE_57251_length_296_cov_1.597701_g49312_i0reverse_frame_3 - 0.016 15.6 1.9 0.019 15.3 1.9 1.0 1 0 0 1 1 1 0 EbsA-like protein Atrophin-1 PF03154.15 NODE_57251_length_296_cov_1.597701_g49312_i0reverse_frame_3 - 0.39 8.9 2.1 0.42 8.8 2.1 1.0 1 0 0 1 1 1 0 Atrophin-1 family Fmp27_WPPW PF10359.9 NODE_57251_length_296_cov_1.597701_g49312_i0reverse_frame_3 - 1.5 7.5 9.3 1.7 7.4 9.3 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain SelP_C PF04593.14 NODE_57250_length_296_cov_1.605364_g49311_i0forward_frame_3 - 0.0023 17.9 2.5 0.0029 17.6 2.5 1.2 1 0 0 1 1 1 1 Selenoprotein P, C terminal region Cyclin_N PF00134.23 NODE_57246_length_296_cov_1.670498_g49307_i0forward_frame_3 - 5e-10 39.2 0.1 6.8e-10 38.8 0.1 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain COesterase PF00135.28 NODE_57244_length_296_cov_1.678161_g49305_i0reverse_frame_3 - 0.16 10.8 0.0 0.16 10.8 0.0 1.0 1 0 0 1 1 1 0 Carboxylesterase family NGF PF00243.18 NODE_57244_length_296_cov_1.678161_g49305_i0forward_frame_2 - 0.059 13.6 1.7 0.078 13.2 1.7 1.2 1 0 0 1 1 1 0 Nerve growth factor family Macoilin PF09726.9 NODE_57241_length_296_cov_1.727969_g49302_i0reverse_frame_2 - 7.6 5.0 5.3 9 4.7 5.3 1.0 1 0 0 1 1 1 0 Macoilin family SAM35 PF10806.8 NODE_57240_length_296_cov_1.804598_g49301_i0reverse_frame_3 - 0.15 12.4 1.7 0.2 11.9 1.7 1.3 1 0 0 1 1 1 0 SAM35, subunit of SAM coomplex Pdase_C33_assoc PF14756.6 NODE_57240_length_296_cov_1.804598_g49301_i0forward_frame_3 - 2.3 8.1 8.1 14 5.5 6.4 2.0 1 1 1 2 2 2 0 Peptidase_C33-associated domain DeoC PF01791.9 NODE_57239_length_296_cov_1.804598_g49300_i0forward_frame_3 - 0.0092 15.6 0.1 0.0092 15.6 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase PKHD_C PF18331.1 NODE_57232_length_296_cov_1.885057_g49293_i0forward_frame_2 - 0.17 12.0 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 PKHD-type hydroxylase C-terminal domain Glyco_hydro_20 PF00728.22 NODE_57230_length_296_cov_1.938697_g49291_i0forward_frame_3 - 7.8e-36 124.2 0.1 8.6e-36 124.0 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain CvfB_WH PF17783.1 NODE_57226_length_296_cov_2.134100_g49287_i0forward_frame_3 - 0.03 14.1 0.3 0.052 13.4 0.3 1.4 1 0 0 1 1 1 0 CvfB-like winged helix domain Phage_pRha PF09669.10 NODE_57226_length_296_cov_2.134100_g49287_i0forward_frame_3 - 0.06 13.9 1.3 0.077 13.6 1.3 1.1 1 0 0 1 1 1 0 Phage regulatory protein Rha (Phage_pRha) DUF3112 PF11309.8 NODE_57225_length_296_cov_2.145594_g49286_i0reverse_frame_3 - 0.023 14.2 0.6 0.024 14.1 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) DUF996 PF06195.13 NODE_57225_length_296_cov_2.145594_g49286_i0forward_frame_3 - 0.01 16.1 2.4 0.011 16.0 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF996) ORMDL PF04061.14 NODE_57225_length_296_cov_2.145594_g49286_i0forward_frame_2 - 3.8 7.3 8.3 0.69 9.7 1.9 2.0 1 1 1 2 2 2 0 ORMDL family MASE1 PF05231.14 NODE_57222_length_296_cov_2.283525_g49283_i0forward_frame_3 - 1.8e-20 73.3 11.4 1.9e-20 73.2 11.4 1.0 1 0 0 1 1 1 1 MASE1 EPF PF17181.4 NODE_57218_length_296_cov_2.436782_g49279_i0reverse_frame_2 - 1.8 8.7 16.5 6.3 6.9 16.5 2.1 1 1 0 1 1 1 0 Epidermal patterning factor proteins DUF1955 PF09205.10 NODE_57216_length_296_cov_2.501916_g49277_i0reverse_frame_2 - 0.019 14.7 0.7 0.019 14.7 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) TUG-UBL1 PF11470.8 NODE_57216_length_296_cov_2.501916_g49277_i0reverse_frame_2 - 0.032 14.5 0.2 0.051 13.8 0.2 1.3 1 0 0 1 1 1 0 TUG ubiquitin-like domain FERM_N PF09379.10 NODE_57216_length_296_cov_2.501916_g49277_i0reverse_frame_2 - 0.087 12.8 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 FERM N-terminal domain DUF1654 PF07867.11 NODE_57214_length_296_cov_2.528736_g49275_i0reverse_frame_3 - 0.13 12.1 0.1 0.19 11.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1654) Elicitin PF00964.17 NODE_57208_length_296_cov_2.724138_g49269_i0reverse_frame_3 - 0.015 15.4 2.8 0.018 15.1 2.8 1.3 1 0 0 1 1 1 0 Elicitin Pkinase PF00069.25 NODE_57208_length_296_cov_2.724138_g49269_i0forward_frame_2 - 0.00018 21.0 0.0 0.00019 20.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain DUF4820 PF16091.5 NODE_57205_length_296_cov_2.785441_g49266_i0reverse_frame_2 - 0.087 12.2 1.0 0.1 11.9 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) IL2RB_N1 PF18707.1 NODE_57205_length_296_cov_2.785441_g49266_i0reverse_frame_2 - 0.16 12.5 3.8 0.2 12.2 3.8 1.1 1 0 0 1 1 1 0 Interleukin-2 receptor subunit beta N-terminal domain 1 KTI12 PF08433.10 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_2 - 0.0053 16.2 1.3 0.0062 16.0 1.3 1.0 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Caps_synth_GfcC PF06251.11 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_2 - 0.029 14.0 1.4 0.03 13.9 1.4 1.0 1 0 0 1 1 1 0 Capsule biosynthesis GfcC GH97_N PF14508.6 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_2 - 0.058 12.9 0.5 0.06 12.8 0.5 1.2 1 0 0 1 1 1 0 Glycosyl-hydrolase 97 N-terminal Chordopox_A13L PF05961.11 NODE_57204_length_296_cov_2.819923_g49265_i0reverse_frame_2 - 2.4 8.5 5.5 3.3 8.0 0.4 2.3 1 1 1 2 2 2 0 Chordopoxvirus A13L protein MFS_4 PF06779.14 NODE_57203_length_296_cov_2.846743_g49264_i0forward_frame_3 - 3.5e-37 128.6 8.6 3.8e-37 128.4 8.6 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_1 PF07690.16 NODE_57203_length_296_cov_2.846743_g49264_i0forward_frame_3 - 3.4e-05 22.9 15.2 3.7e-05 22.8 15.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Seadorna_Vp10 PF07322.11 NODE_57199_length_296_cov_3.107280_g49260_i0forward_frame_3 - 0.096 12.1 2.7 0.11 11.9 2.7 1.1 1 0 0 1 1 1 0 Seadornavirus Vp10 DUF863 PF05904.11 NODE_57198_length_296_cov_3.107280_g49259_i0forward_frame_3 - 0.064 11.7 0.1 0.064 11.7 0.1 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) DUF3780 PF12635.7 NODE_57192_length_296_cov_3.892720_g49253_i0reverse_frame_2 - 0.21 11.4 0.4 0.24 11.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3780) Trypan_PARP PF05887.11 NODE_57189_length_296_cov_4.938697_g49250_i0forward_frame_3 - 0.15 12.1 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Arylsulfotran_2 PF14269.6 NODE_57184_length_296_cov_19.229885_g49245_i0reverse_frame_2 - 0.072 12.4 0.0 0.085 12.2 0.0 1.1 1 0 0 1 1 1 0 Arylsulfotransferase (ASST) Dpoe2NT PF12213.8 NODE_57182_length_296_cov_40.413793_g49243_i0reverse_frame_2 - 0.068 13.5 0.0 0.097 13.0 0.0 1.3 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal RPS31 PF17067.5 NODE_57182_length_296_cov_40.413793_g49243_i0forward_frame_3 - 0.15 12.2 2.8 0.22 11.7 2.8 1.3 1 1 0 1 1 1 0 Ribosomal protein S31e RRM_1 PF00076.22 NODE_57181_length_296_cov_40.613027_g49242_i0reverse_frame_3 - 2.2e-10 40.2 0.0 1.8e-05 24.4 0.0 2.1 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PHM7_cyt PF14703.6 NODE_57181_length_296_cov_40.613027_g49242_i0reverse_frame_3 - 0.18 12.0 0.0 1.7 8.8 0.0 2.0 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter v110 PF01639.17 NODE_57180_length_296_cov_41.072797_g49241_i0forward_frame_2 - 0.1 12.5 0.9 0.16 11.9 0.9 1.3 1 0 0 1 1 1 0 Viral family 110 FTP PF07504.13 NODE_57179_length_296_cov_42.536398_g49240_i0forward_frame_3 - 0.017 14.9 0.1 0.028 14.2 0.1 1.4 1 0 0 1 1 1 0 Fungalysin/Thermolysin Propeptide Motif Hist_rich_Ca-bd PF10529.9 NODE_57178_length_296_cov_44.605364_g49239_i0forward_frame_2 - 3.1 8.1 5.5 4.2 7.7 5.5 1.2 1 0 0 1 1 1 0 Histidine-rich Calcium-binding repeat region GAIN_A PF18619.1 NODE_57177_length_296_cov_48.394636_g49238_i0forward_frame_2 - 0.055 13.7 0.1 0.092 13.0 0.1 1.3 1 0 0 1 1 1 0 GPCR-Autoproteolysis-INducing (GAIN) subdomain A DUF3964 PF13107.6 NODE_57177_length_296_cov_48.394636_g49238_i0forward_frame_2 - 0.06 13.8 0.4 0.079 13.4 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3964) SID-1_RNA_chan PF13965.6 NODE_57175_length_296_cov_51.647510_g49236_i0reverse_frame_3 - 0.13 10.7 0.7 0.13 10.6 0.7 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 HNH_2 PF13391.6 NODE_57174_length_296_cov_51.662835_g49235_i0reverse_frame_2 - 0.15 12.2 0.7 1 9.5 0.7 2.1 1 1 0 1 1 1 0 HNH endonuclease TatD_DNase PF01026.21 NODE_57170_length_296_cov_57.532567_g49231_i0reverse_frame_2 - 1.8e-10 40.6 0.0 1.9e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase zf-Paramyx-P PF13008.7 NODE_57170_length_296_cov_57.532567_g49231_i0forward_frame_3 - 0.027 13.9 0.1 0.06 12.8 0.1 1.6 1 0 0 1 1 1 0 Zinc-binding domain of Paramyxoviridae V protein Gly_acyl_tr_N PF06021.11 NODE_57169_length_296_cov_57.685824_g49230_i0forward_frame_2 - 0.048 13.8 1.5 0.052 13.7 1.5 1.0 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase MTTB PF06253.11 NODE_57164_length_296_cov_66.927203_g49225_i0reverse_frame_3 - 0.11 10.5 0.1 0.12 10.3 0.1 1.1 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) OAM_dimer PF16554.5 NODE_57164_length_296_cov_66.927203_g49225_i0reverse_frame_2 - 0.14 12.7 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain of d-ornithine 4,5-aminomutase Ribosomal_L39 PF00832.20 NODE_57163_length_296_cov_68.118774_g49224_i0forward_frame_2 - 4.1 7.1 10.0 2.1 8.1 0.4 2.8 2 1 0 2 2 2 0 Ribosomal L39 protein RE_Eco29kI PF09517.10 NODE_57162_length_296_cov_68.325670_g49223_i0forward_frame_3 - 0.043 13.4 0.0 0.047 13.3 0.0 1.2 1 0 0 1 1 1 0 Eco29kI restriction endonuclease DUF4248 PF14053.6 NODE_57159_length_296_cov_70.475096_g49220_i0forward_frame_3 - 0.06 13.4 0.0 4.3 7.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4248) MCM_OB PF17207.3 NODE_57156_length_296_cov_73.839080_g49217_i0reverse_frame_2 - 0.027 14.3 0.1 0.039 13.8 0.1 1.2 1 0 0 1 1 1 0 MCM OB domain Methyltrans_RNA PF04452.14 NODE_57155_length_296_cov_74.283525_g49216_i0forward_frame_2 - 8.8e-05 21.9 0.1 0.00022 20.7 0.0 1.6 2 0 0 2 2 2 1 RNA methyltransferase FAD_binding_2 PF00890.24 NODE_57152_length_296_cov_81.923372_g49213_i0forward_frame_2 - 9e-11 41.5 0.0 1e-10 41.3 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain ATXN-1_C PF12547.8 NODE_57150_length_296_cov_86.429119_g49211_i0forward_frame_2 - 1 9.7 4.8 1.2 9.5 0.6 2.3 2 0 0 2 2 2 0 Capicua transcriptional repressor modulator Zeta_toxin PF06414.12 NODE_57148_length_296_cov_92.850575_g49209_i0reverse_frame_3 - 0.0006 19.1 0.1 0.00064 19.1 0.1 1.1 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 NODE_57148_length_296_cov_92.850575_g49209_i0reverse_frame_3 - 0.0043 17.2 0.3 0.0047 17.1 0.3 1.1 1 0 0 1 1 1 1 AAA domain DUF4491 PF14898.6 NODE_57147_length_296_cov_96.620690_g49208_i0reverse_frame_3 - 0.09 13.2 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) Fe_bilin_red PF05996.12 NODE_57147_length_296_cov_96.620690_g49208_i0forward_frame_2 - 0.016 14.9 0.9 0.017 14.8 0.9 1.1 1 0 0 1 1 1 0 Ferredoxin-dependent bilin reductase Terminase_4 PF05119.12 NODE_57147_length_296_cov_96.620690_g49208_i0forward_frame_2 - 0.075 13.5 0.1 0.1 13.1 0.1 1.2 1 0 0 1 1 1 0 Phage terminase, small subunit HemN_C PF06969.16 NODE_57145_length_296_cov_108.486590_g40215_i1reverse_frame_2 - 0.026 14.6 0.1 0.044 13.9 0.1 1.3 1 0 0 1 1 1 0 HemN C-terminal domain TIP39 PF14980.6 NODE_57135_length_296_cov_289.283525_g49197_i0reverse_frame_3 - 0.14 12.1 0.1 0.2 11.6 0.1 1.2 1 0 0 1 1 1 0 TIP39 peptide NiFe_hyd_SSU_C PF14720.6 NODE_57134_length_296_cov_315.536398_g49196_i0reverse_frame_2 - 0.16 12.3 2.0 0.23 11.8 0.7 1.8 1 1 1 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal DUF3915 PF13054.6 NODE_57133_length_296_cov_331.486590_g49195_i0reverse_frame_2 - 0.22 11.5 4.3 0.16 11.9 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3915) ABC2_membrane_5 PF13346.6 NODE_57133_length_296_cov_331.486590_g49195_i0forward_frame_3 - 0.047 13.2 0.4 0.056 13.0 0.4 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein HNH PF01844.23 NODE_57132_length_296_cov_341.505747_g49194_i0forward_frame_2 - 0.14 12.4 1.3 0.23 11.7 1.3 1.4 1 0 0 1 1 1 0 HNH endonuclease BBP1_C PF15272.6 NODE_57130_length_296_cov_344.471264_g49192_i0reverse_frame_3 - 0.011 15.6 0.3 0.013 15.4 0.3 1.0 1 0 0 1 1 1 0 Spindle pole body component BBP1, C-terminal Topo_C_assoc PF14370.6 NODE_57130_length_296_cov_344.471264_g49192_i0reverse_frame_2 - 0.0038 17.1 0.1 0.006 16.5 0.1 1.3 1 0 0 1 1 1 1 C-terminal topoisomerase domain EptA_B_N PF08019.12 NODE_57130_length_296_cov_344.471264_g49192_i0reverse_frame_2 - 0.0089 15.9 1.1 0.012 15.5 1.1 1.3 1 0 0 1 1 1 1 Phosphoethanolamine transferase EptA/EptB DUF4702 PF15774.5 NODE_57126_length_296_cov_480.272031_g49188_i0reverse_frame_2 - 0.0096 14.9 0.0 0.012 14.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4702) Rpr2 PF04032.16 NODE_57126_length_296_cov_480.272031_g49188_i0reverse_frame_2 - 3 8.2 8.9 17 5.8 8.9 2.0 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain APA3_viroporin PF11289.8 NODE_57125_length_296_cov_703.463602_g49187_i0forward_frame_3 - 0.29 10.7 2.0 0.33 10.5 2.0 1.1 1 0 0 1 1 1 0 Coronavirus accessory protein 3a PDR_CDR PF06422.12 NODE_57125_length_296_cov_703.463602_g49187_i0forward_frame_2 - 0.1 12.5 0.5 0.13 12.2 0.5 1.2 1 0 0 1 1 1 0 CDR ABC transporter Metallothi_Euk2 PF12809.7 NODE_57122_length_296_cov_2576.773946_g49184_i0forward_frame_2 - 0.054 13.8 0.0 0.097 13.0 0.0 1.4 1 0 0 1 1 1 0 Eukaryotic metallothionein Rrn6 PF10214.9 NODE_57121_length_296_cov_12029.252874_g49183_i0forward_frame_3 - 0.48 8.9 4.7 0.54 8.7 4.7 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF5538 PF17692.1 NODE_57120_length_296_cov_21235.080460_g49182_i0reverse_frame_2 - 0.13 12.3 4.2 0.16 12.1 4.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) DUF3482 PF11981.8 NODE_57120_length_296_cov_21235.080460_g49182_i0forward_frame_3 - 0.38 10.1 11.4 0.28 10.5 10.4 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3482) RNA_pol_Rpb2_3 PF04565.16 NODE_57118_length_296_cov_133006.716475_g49180_i0forward_frame_2 - 0.093 12.9 0.1 0.2 11.9 0.1 1.6 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 3 Toxin_2 PF00451.19 NODE_57115_length_297_cov_1.068702_g49177_i0reverse_frame_3 - 0.04 14.2 3.2 0.049 13.9 1.0 2.1 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 MNNL PF07657.13 NODE_57115_length_297_cov_1.068702_g49177_i0forward_frame_3 - 0.12 12.4 5.3 0.36 10.9 1.2 2.1 2 0 0 2 2 2 0 N terminus of Notch ligand RVT_1 PF00078.27 NODE_57110_length_297_cov_1.194656_g49172_i0forward_frame_3 - 0.0081 15.7 0.1 0.0085 15.6 0.1 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Ureide_permease PF07168.11 NODE_57108_length_297_cov_1.312977_g49170_i0forward_frame_2 - 0.033 12.9 0.1 0.04 12.7 0.1 1.1 1 0 0 1 1 1 0 Ureide permease DUF2140 PF09911.9 NODE_57107_length_297_cov_1.320611_g49169_i0reverse_frame_3 - 0.0059 16.2 0.0 0.0091 15.6 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2140) Mid2 PF04478.12 NODE_57107_length_297_cov_1.320611_g49169_i0forward_frame_2 - 0.23 11.3 3.5 0.079 12.8 0.7 1.6 1 1 1 2 2 2 0 Mid2 like cell wall stress sensor Popeye PF04831.13 NODE_57101_length_297_cov_1.458015_g49163_i0reverse_frame_2 - 0.26 11.5 2.6 0.29 11.3 2.6 1.2 1 0 0 1 1 1 0 Popeye protein conserved region UPF0506 PF11703.8 NODE_57100_length_297_cov_1.515267_g49162_i0forward_frame_3 - 0.01 16.2 5.5 0.01 16.2 5.5 2.1 2 0 0 2 2 2 0 UPF0506 DUF629 PF04780.12 NODE_57097_length_297_cov_1.622137_g49159_i0reverse_frame_2 - 0.017 13.7 0.0 0.02 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) DUF2921 PF11145.8 NODE_57097_length_297_cov_1.622137_g49159_i0reverse_frame_2 - 0.025 12.5 0.1 0.025 12.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2921) PGM_PMM_I PF02878.16 NODE_57096_length_297_cov_1.625954_g49158_i0forward_frame_2 - 5.1e-14 52.2 0.0 1e-08 34.9 0.0 2.0 2 0 0 2 2 2 2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Lamprin PF06403.11 NODE_57093_length_297_cov_1.687023_g49155_i0forward_frame_3 - 8.5 6.3 9.9 1.4 8.8 4.9 1.9 1 1 0 2 2 2 0 Lamprin EamA PF00892.20 NODE_57092_length_297_cov_1.698473_g49154_i0forward_frame_3 - 4.2e-05 23.7 12.4 0.0021 18.2 0.9 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF5496 PF17600.2 NODE_57091_length_297_cov_1.725191_g49153_i0reverse_frame_3 - 0.24 11.5 1.7 0.28 11.3 0.4 1.6 1 1 1 2 2 2 0 Family of unknown function (DUF5496) LMP PF04778.12 NODE_57089_length_297_cov_1.751908_g49151_i0reverse_frame_3 - 0.02 14.8 0.9 0.025 14.5 0.9 1.1 1 0 0 1 1 1 0 LMP repeated region ATG11 PF10377.9 NODE_57089_length_297_cov_1.751908_g49151_i0reverse_frame_3 - 0.11 12.5 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Autophagy-related protein 11 Lipin_mid PF16876.5 NODE_57089_length_297_cov_1.751908_g49151_i0reverse_frame_2 - 0.14 12.3 1.9 0.26 11.4 1.9 1.4 1 1 0 1 1 1 0 Lipin/Ned1/Smp2 multi-domain protein middle domain DUF601 PF04642.12 NODE_57088_length_297_cov_1.774809_g49150_i0reverse_frame_3 - 0.2 11.1 3.5 0.24 10.8 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF601 DUF629 PF04780.12 NODE_57088_length_297_cov_1.774809_g49150_i0reverse_frame_2 - 0.021 13.4 0.0 0.025 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) DUF2921 PF11145.8 NODE_57088_length_297_cov_1.774809_g49150_i0reverse_frame_2 - 0.022 12.6 0.1 0.023 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2921) SHP PF03579.13 NODE_57083_length_297_cov_1.885496_g49145_i0reverse_frame_3 - 0.085 12.8 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Small hydrophobic protein SHIPPO-rpt PF07004.12 NODE_57080_length_297_cov_1.912214_g49142_i0reverse_frame_2 - 0.00065 20.5 3.0 0.02 15.8 0.2 2.4 2 1 0 2 2 2 2 Sperm-tail PG-rich repeat KIAA1328 PF15369.6 NODE_57079_length_297_cov_1.923664_g49141_i0reverse_frame_3 - 1.6 8.5 4.7 1.9 8.3 4.7 1.0 1 0 0 1 1 1 0 Uncharacterised protein KIAA1328 Thg1C PF14413.6 NODE_57078_length_297_cov_1.954198_g49140_i0reverse_frame_2 - 0.082 13.1 0.2 0.14 12.3 0.2 1.3 1 0 0 1 1 1 0 Thg1 C terminal domain FYVE PF01363.21 NODE_57077_length_297_cov_1.980916_g49139_i0forward_frame_2 - 8.3 6.6 13.6 2.3 8.4 9.4 2.1 1 1 1 2 2 2 0 FYVE zinc finger Pox_A32 PF04665.12 NODE_57075_length_297_cov_1.988550_g49137_i0forward_frame_3 - 0.23 10.9 0.6 0.3 10.5 0.6 1.1 1 0 0 1 1 1 0 Poxvirus A32 protein HCO3_cotransp PF00955.21 NODE_57074_length_297_cov_1.988550_g49136_i0forward_frame_2 - 1.9e-19 69.9 1.2 2.4e-19 69.6 1.2 1.0 1 0 0 1 1 1 1 HCO3- transporter family Cadherin_C_2 PF16492.5 NODE_57073_length_297_cov_1.996183_g49135_i0forward_frame_2 - 6.5 7.6 6.5 20 6.0 6.5 1.9 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal DUF4635 PF15466.6 NODE_57065_length_297_cov_2.137405_g49127_i0reverse_frame_3 - 0.084 12.4 0.4 0.1 12.1 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4635) RPN1_C PF18051.1 NODE_57063_length_297_cov_2.213740_g49125_i0reverse_frame_3 - 0.047 13.7 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal RMMBL PF07521.12 NODE_57061_length_297_cov_2.232824_g49123_i0forward_frame_3 - 9.9e-05 22.2 0.1 0.0006 19.7 0.1 1.9 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Beta-Casp PF10996.8 NODE_57061_length_297_cov_2.232824_g49123_i0forward_frame_3 - 0.00057 20.1 0.0 0.00099 19.4 0.0 1.4 1 0 0 1 1 1 1 Beta-Casp domain Beta-Casp PF10996.8 NODE_57061_length_297_cov_2.232824_g49123_i0forward_frame_2 - 9.8e-05 22.6 0.0 0.00013 22.2 0.0 1.2 1 0 0 1 1 1 1 Beta-Casp domain ATP-gua_PtransN PF02807.15 NODE_57060_length_297_cov_2.236641_g49122_i0forward_frame_3 - 0.089 13.2 0.4 1.8 9.0 0.0 2.1 2 0 0 2 2 2 0 ATP:guanido phosphotransferase, N-terminal domain DUF402 PF04167.13 NODE_57058_length_297_cov_2.343511_g49120_i0forward_frame_2 - 0.11 12.7 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF402) Aminotran_1_2 PF00155.21 NODE_57057_length_297_cov_2.427481_g49119_i0reverse_frame_2 - 1.8e-18 66.9 0.0 1.9e-18 66.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Oest_recep PF02159.15 NODE_57057_length_297_cov_2.427481_g49119_i0reverse_frame_2 - 0.034 14.6 0.0 0.041 14.4 0.0 1.1 1 0 0 1 1 1 0 Oestrogen receptor Gpi16 PF04113.14 NODE_57056_length_297_cov_2.519084_g49118_i0reverse_frame_3 - 0.065 11.7 0.2 0.079 11.4 0.2 1.1 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component SBP_bac_5 PF00496.22 NODE_57054_length_297_cov_2.564885_g49116_i0forward_frame_3 - 2.1e-18 66.4 0.0 2.5e-18 66.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Homeodomain PF00046.29 NODE_57054_length_297_cov_2.564885_g49116_i0forward_frame_3 - 0.061 13.2 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Homeodomain Oxysterol_BP PF01237.18 NODE_57051_length_297_cov_2.732824_g49113_i0reverse_frame_2 - 1.2e-23 83.6 0.0 1.3e-23 83.5 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein DUF992 PF06186.11 NODE_57050_length_297_cov_2.748092_g49112_i0reverse_frame_2 - 0.11 12.4 0.4 0.13 12.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF992) DUF2838 PF10998.8 NODE_57047_length_297_cov_2.877863_g49109_i0forward_frame_2 - 0.039 14.2 5.8 0.042 14.1 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) Molydop_binding PF01568.21 NODE_57046_length_297_cov_2.900763_g49108_i0reverse_frame_3 - 8.1e-20 70.9 0.0 9.2e-20 70.7 0.0 1.0 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain PUA_3 PF17785.1 NODE_57046_length_297_cov_2.900763_g49108_i0reverse_frame_3 - 0.016 15.0 0.0 0.023 14.5 0.0 1.2 1 0 0 1 1 1 0 PUA-like domain LapD_MoxY_N PF16448.5 NODE_57046_length_297_cov_2.900763_g49108_i0forward_frame_2 - 0.12 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 LapD/MoxY periplasmic domain Arm-DNA-bind_3 PF13356.6 NODE_57041_length_297_cov_3.049618_g49103_i0forward_frame_2 - 0.02 15.2 1.5 0.025 14.9 1.1 1.5 1 1 0 1 1 1 0 Arm DNA-binding domain Keratin_B2_2 PF13885.6 NODE_57040_length_297_cov_3.282443_g49102_i0reverse_frame_3 - 0.9 9.6 15.7 2.9 7.9 1.1 2.5 2 1 0 2 2 2 0 Keratin, high sulfur B2 protein AAA_23 PF13476.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 7.1e-23 82.2 0.0 8.1e-23 82.0 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 2.8e-08 33.4 0.0 3.7e-08 33.0 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain T2SSE PF00437.20 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 1.1e-05 24.6 0.0 1.1e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein SMC_N PF02463.19 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.00012 21.6 0.0 0.00012 21.6 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.00014 22.4 0.0 0.00017 22.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_15 PF13175.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.00025 20.9 0.0 0.00025 20.9 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0003 20.7 0.0 0.00033 20.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_27 PF13514.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0014 18.3 0.0 0.0015 18.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0019 17.9 0.0 0.0021 17.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0019 17.8 0.0 0.0023 17.6 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0022 18.3 0.0 0.0025 18.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0024 17.8 0.0 0.0027 17.6 0.0 1.2 1 0 0 1 1 1 1 NACHT domain NTPase_1 PF03266.15 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0043 17.0 0.0 0.006 16.5 0.0 1.3 1 0 0 1 1 1 1 NTPase ABC_ATPase PF09818.9 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.005 15.7 0.0 0.0067 15.3 0.0 1.1 1 0 0 1 1 1 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.008 16.1 0.0 0.0085 16.0 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase TsaE PF02367.17 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.0091 16.0 0.0 0.014 15.4 0.0 1.3 1 1 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.014 14.9 0.0 0.017 14.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.015 15.7 0.0 0.015 15.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.024 14.7 0.0 0.03 14.4 0.0 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_14 PF13173.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.046 13.8 0.0 0.056 13.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.051 13.1 0.0 0.064 12.8 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_19 PF13245.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.054 13.8 0.0 0.061 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.056 13.9 0.0 0.064 13.7 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.06 13.6 0.4 0.078 13.2 0.4 1.3 1 1 0 1 1 1 0 AAA domain MobB PF03205.14 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.065 13.1 0.0 0.083 12.8 0.0 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.066 13.8 0.0 0.087 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.087 13.2 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.11 12.3 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF87 PF01935.17 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.11 12.6 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_11 PF13086.6 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.13 12.0 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.13 12.0 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein DUF2075 PF09848.9 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.16 11.2 0.0 0.17 11.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 NODE_57035_length_297_cov_3.862595_g49097_i0reverse_frame_3 - 0.16 12.0 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Myotub-related PF06602.14 NODE_57032_length_297_cov_4.335878_g49094_i0forward_frame_3 - 1.7e-51 175.3 1.0 1.8e-51 175.2 1.0 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain Y_phosphatase3 PF13350.6 NODE_57032_length_297_cov_4.335878_g49094_i0forward_frame_3 - 0.14 12.1 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family Glyco_transf_4 PF13439.6 NODE_57028_length_297_cov_5.790076_g49090_i0forward_frame_3 - 0.091 12.8 0.1 0.093 12.7 0.1 1.1 1 0 0 1 1 1 0 Glycosyltransferase Family 4 CEP44 PF15007.6 NODE_57026_length_297_cov_16.740458_g49088_i0reverse_frame_3 - 0.033 14.3 0.8 0.077 13.2 0.4 1.6 1 1 1 2 2 2 0 Centrosomal spindle body, CEP44 Pkinase PF00069.25 NODE_57024_length_297_cov_28.099237_g49086_i0forward_frame_2 - 5.9e-14 52.1 0.4 6.9e-14 51.8 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57024_length_297_cov_28.099237_g49086_i0forward_frame_2 - 1.2e-08 34.5 0.2 1.5e-08 34.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase TetR_C_37 PF18665.1 NODE_57020_length_297_cov_40.484733_g49082_i0reverse_frame_2 - 0.038 14.6 1.8 0.049 14.2 1.8 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain PIG-P PF08510.12 NODE_57018_length_297_cov_47.290076_g49080_i0reverse_frame_3 - 0.19 11.6 3.2 0.22 11.4 3.2 1.2 1 0 0 1 1 1 0 PIG-P TMEM100 PF16311.5 NODE_57016_length_297_cov_49.561069_g49078_i0reverse_frame_2 - 1.3 8.7 3.9 1.9 8.1 3.9 1.4 1 0 0 1 1 1 0 Transmembrane protein 100 Etmic-2 PF06670.11 NODE_57016_length_297_cov_49.561069_g49078_i0forward_frame_3 - 0.076 11.9 2.3 0.083 11.8 2.3 1.0 1 0 0 1 1 1 0 Microneme protein Etmic-2 APA3_viroporin PF11289.8 NODE_57008_length_297_cov_66.129771_g49070_i0forward_frame_2 - 0.1 12.2 0.7 0.13 11.8 0.7 1.1 1 0 0 1 1 1 0 Coronavirus accessory protein 3a TOH_N PF12549.8 NODE_57007_length_297_cov_66.526718_g49069_i0forward_frame_3 - 0.078 12.8 0.9 0.13 12.1 0.0 1.8 2 0 0 2 2 2 0 Tyrosine hydroxylase N terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks272.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks272.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks272.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks272.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4520 PF15016.6 NODE_57003_length_297_cov_84.534351_g49065_i0reverse_frame_3 - 0.13 12.4 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4520) Enolase_like_N PF18374.1 NODE_57001_length_297_cov_91.633588_g49063_i0forward_frame_3 - 0.034 13.5 0.1 0.07 12.5 0.1 1.5 1 0 0 1 1 1 0 Enolase N-terminal domain-like DUF5345 PF17280.2 NODE_57000_length_297_cov_94.263359_g49062_i0reverse_frame_2 - 0.28 11.2 0.5 19 5.3 0.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5345) Allene_ox_cyc PF06351.11 NODE_56998_length_297_cov_109.206107_g49060_i0reverse_frame_2 - 0.018 14.8 0.0 0.023 14.5 0.0 1.2 1 0 0 1 1 1 0 Allene oxide cyclase EF-hand_7 PF13499.6 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_3 - 0.0039 17.6 0.1 0.0074 16.7 0.1 1.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_3 - 0.0051 16.3 0.0 0.0075 15.7 0.0 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_3 - 0.039 13.9 0.0 0.064 13.2 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain DUF4720 PF15846.5 NODE_56998_length_297_cov_109.206107_g49060_i0forward_frame_3 - 0.12 12.3 0.1 0.13 12.1 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4720) Glyco_H_20C_C PF18088.1 NODE_56994_length_297_cov_129.591603_g49056_i0forward_frame_2 - 0.078 12.8 0.0 0.093 12.6 0.0 1.1 1 0 0 1 1 1 0 Glycoside Hydrolase 20C C-terminal domain DUF3666 PF12408.8 NODE_56993_length_297_cov_142.263359_g49055_i0reverse_frame_2 - 0.26 10.5 4.0 1.6 8.0 0.1 2.2 2 0 0 2 2 2 0 Ribose-5-phosphate isomerase RuBisCo_chap_C PF18087.1 NODE_56993_length_297_cov_142.263359_g49055_i0forward_frame_3 - 0.17 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Rubisco Assembly chaperone C-terminal domain TTc_toxin_rep PF18807.1 NODE_56991_length_297_cov_154.068702_g49053_i0forward_frame_3 - 0.044 13.6 0.2 0.082 12.7 0.2 1.4 1 0 0 1 1 1 0 Tripartite Tc toxins repeat Synapsin_N PF10581.9 NODE_56989_length_297_cov_186.343511_g49051_i0forward_frame_2 - 0.04 13.9 1.0 0.086 12.8 1.0 1.5 1 0 0 1 1 1 0 Synapsin N-terminal LANC_like PF05147.13 NODE_56988_length_297_cov_204.022901_g49050_i0reverse_frame_3 - 0.0034 16.0 0.0 0.0037 15.9 0.0 1.1 1 0 0 1 1 1 1 Lanthionine synthetase C-like protein DEAD_2 PF06733.15 NODE_56987_length_297_cov_207.290076_g49049_i0reverse_frame_3 - 0.099 12.3 0.3 0.11 12.1 0.3 1.1 1 0 0 1 1 1 0 DEAD_2 EXS PF03124.14 NODE_56984_length_297_cov_497.729008_g49046_i0forward_frame_3 - 0.1 11.9 0.2 0.14 11.5 0.2 1.3 1 1 0 1 1 1 0 EXS family SDA1 PF05285.12 NODE_56981_length_297_cov_1218.603053_g49043_i0forward_frame_3 - 5.8 6.2 11.3 7.4 5.9 11.3 1.1 1 0 0 1 1 1 0 SDA1 Clathrin_bdg PF15045.6 NODE_56979_length_297_cov_1837.362595_g49041_i0reverse_frame_2 - 0.074 13.1 0.1 0.13 12.3 0.1 1.4 1 0 0 1 1 1 0 Clathrin-binding box of Aftiphilin, vesicle trafficking DUF1455 PF07306.11 NODE_56976_length_297_cov_2466.400763_g49038_i0reverse_frame_3 - 0.15 12.0 0.1 0.2 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1455) Corona_M PF01635.18 NODE_56973_length_297_cov_73406.664122_g49035_i0reverse_frame_2 - 0.22 10.8 6.1 0.27 10.5 6.1 1.0 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein MORN PF02493.20 NODE_56973_length_297_cov_73406.664122_g49035_i0forward_frame_2 - 4.4e-07 29.4 0.3 0.00013 21.7 0.1 2.5 2 0 0 2 2 2 2 MORN repeat DUF4798 PF16055.5 ORF98772 - 0.25 11.6 2.5 0.26 11.5 0.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4798) PilA4 PF18682.1 ORF98116 - 0.14 12.6 0.2 0.14 12.6 0.2 1.5 2 0 0 2 2 2 0 Pilin A4 zf-RING_6 PF14835.6 ORF98116 - 2.9 7.8 8.8 1.1 9.2 2.3 2.2 1 1 1 2 2 2 0 zf-RING of BARD1-type protein DUF4337 PF14235.6 ORF97932 - 1.8 8.7 5.5 2.2 8.3 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Tr-sialidase_C PF11052.8 ORF97769 - 0.13 12.4 4.5 0.26 11.4 4.5 1.5 1 0 0 1 1 1 0 Trans-sialidase of Trypanosoma hydrophobic C-terminal DUF1482 PF07358.11 ORF9705 - 0.16 11.9 0.8 20 5.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1482) zf-CCCH PF00642.24 ORF96897 - 2.7e-08 33.5 3.8 2.7e-08 33.5 3.8 1.6 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF96897 - 0.02 15.3 1.1 0.02 15.3 1.1 2.0 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF96897 - 4.7 7.4 11.1 1.2 9.3 5.3 2.5 2 1 0 2 2 2 0 Zinc finger domain TMEM132D_C PF15706.5 ORF96270 - 0.11 12.3 0.7 0.13 12.0 0.7 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF3270 PF11674.8 ORF96270 - 8 6.7 15.1 5.8 7.2 13.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) Spb1_C PF07780.12 ORF9593 - 1.4e-13 51.0 14.5 1.8e-13 50.6 14.5 1.2 1 0 0 1 1 1 1 Spb1 C-terminal domain DBR1 PF05011.13 ORF9593 - 0.03 14.7 0.9 0.035 14.5 0.9 1.2 1 0 0 1 1 1 0 Lariat debranching enzyme, C-terminal domain UPF0113 PF03657.13 ORF95787 - 0.024 14.9 0.0 0.031 14.6 0.0 1.4 1 0 0 1 1 1 0 UPF0113 PUA domain NDUFB11 PF17250.2 ORF95144 - 0.01 16.4 1.0 0.012 16.2 1.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase 11 kDa subunit US22 PF02393.16 ORF93682 - 0.096 13.0 0.3 0.12 12.7 0.3 1.1 1 0 0 1 1 1 0 US22 like PolyA_pol_arg_C PF12626.7 ORF93250 - 0.023 14.7 0.6 0.042 13.9 0.5 1.4 1 1 0 1 1 1 0 Polymerase A arginine-rich C-terminus TMEM126 PF07114.11 ORF93250 - 0.073 12.5 0.6 0.086 12.2 0.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 126 HTH_8 PF02954.19 ORF92729 - 2.6e-14 52.7 0.4 3.8e-14 52.2 0.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family Phage_NinH PF06322.11 ORF92729 - 0.00053 19.8 0.1 0.0011 18.8 0.1 1.5 1 0 0 1 1 1 1 Phage NinH protein DUF3333 PF11812.8 ORF92729 - 0.025 14.8 0.3 0.029 14.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) HTH_30 PF13556.6 ORF92729 - 0.1 12.4 0.1 0.26 11.1 0.0 1.7 2 0 0 2 2 2 0 PucR C-terminal helix-turn-helix domain Inhibitor_I24 PF10465.9 ORF92729 - 0.14 12.1 0.1 0.17 11.9 0.1 1.1 1 0 0 1 1 1 0 PinA peptidase inhibitor VSG_B PF13206.6 ORF90883 - 0.019 14.3 0.1 0.019 14.2 0.1 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain CaiF_GrlA PF07180.11 ORF90553 - 0.098 12.6 0.4 0.11 12.4 0.4 1.2 1 0 0 1 1 1 0 CaiF/GrlA transcriptional regulator IBR PF01485.21 ORF900 - 0.076 13.3 14.0 0.65 10.3 14.0 2.1 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain TMEM174 PF15029.6 ORF89473 - 0.11 12.2 0.2 0.12 12.0 0.2 1.0 1 0 0 1 1 1 0 Transmembrane protein 174 RasGAP_C PF03836.15 ORF88410 - 0.013 15.7 6.5 0.013 15.7 6.5 2.1 1 1 1 2 2 2 0 RasGAP C-terminus DUF5595 PF18077.1 ORF88410 - 0.013 15.5 9.5 0.051 13.7 1.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5595) KxDL PF10241.9 ORF88410 - 0.019 15.3 12.3 0.035 14.4 3.5 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein Lebercilin PF15619.6 ORF88410 - 0.026 14.2 5.9 0.026 14.2 5.9 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease bZIP_2 PF07716.15 ORF88410 - 0.031 14.3 1.1 0.031 14.3 1.1 2.8 2 1 0 2 2 2 0 Basic region leucine zipper Prefoldin_3 PF13758.6 ORF88410 - 0.046 13.8 8.0 0.054 13.6 6.0 1.8 1 1 1 2 2 2 0 Prefoldin subunit DUF5454 PF17535.2 ORF88410 - 0.086 12.2 10.0 0.092 12.1 10.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5454) Cnn_1N PF07989.11 ORF88410 - 0.097 12.8 15.2 0.12 12.5 9.7 2.2 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Spc7 PF08317.11 ORF88410 - 0.15 10.9 17.4 0.17 10.7 17.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein PAT1 PF09770.9 ORF88410 - 0.16 10.2 6.8 0.16 10.2 6.8 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 APG6_N PF17675.1 ORF88410 - 0.17 12.4 17.8 0.15 12.5 5.2 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region PRKG1_interact PF15898.5 ORF88410 - 0.19 12.7 13.8 0.11 13.5 12.0 1.5 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Cep57_MT_bd PF06657.13 ORF88410 - 0.21 12.1 9.3 3 8.3 1.0 2.3 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 TolA_bind_tri PF16331.5 ORF88410 - 0.26 11.4 8.0 0.73 10.0 4.8 2.6 1 1 1 2 2 2 0 TolA binding protein trimerisation Peptidase_S46 PF10459.9 ORF88410 - 0.32 9.6 9.4 0.35 9.5 9.4 1.0 1 0 0 1 1 1 0 Peptidase S46 FlaC_arch PF05377.11 ORF88410 - 0.52 10.8 8.5 1.1 9.7 1.9 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Dict-STAT-coil PF09267.10 ORF88410 - 0.56 10.6 8.6 0.6 10.5 0.9 2.4 1 1 1 2 2 2 0 Dictyostelium STAT, coiled coil K-box PF01486.17 ORF88410 - 0.67 10.2 18.0 0.14 12.4 14.1 1.9 2 1 0 2 2 1 0 K-box region DUF2203 PF09969.9 ORF88410 - 0.71 10.6 5.7 0.52 11.0 4.2 1.5 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) TMPIT PF07851.13 ORF88410 - 0.75 9.0 15.3 0.91 8.7 15.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF1664 PF07889.12 ORF88410 - 0.92 9.6 8.1 1.8 8.6 2.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Uso1_p115_C PF04871.13 ORF88410 - 1 9.8 18.0 2.2 8.6 18.0 1.5 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Jnk-SapK_ap_N PF09744.9 ORF88410 - 1.1 9.5 16.8 2.7 8.2 16.8 1.6 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 OmpH PF03938.14 ORF88410 - 1.2 9.5 15.6 2.7 8.4 15.6 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4446 PF14584.6 ORF88410 - 1.4 8.9 12.0 0.26 11.3 5.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DivIC PF04977.15 ORF88410 - 1.5 8.6 14.8 0.17 11.7 3.0 2.4 1 1 1 2 2 2 0 Septum formation initiator DUF334 PF03904.13 ORF88410 - 1.6 8.2 10.0 1.7 8.1 10.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) She9_MDM33 PF05546.11 ORF88410 - 1.7 8.4 13.5 1.8 8.3 13.5 1.0 1 0 0 1 1 1 0 She9 / Mdm33 family CHIP_TPR_N PF18391.1 ORF88410 - 2.3 9.0 15.6 0.33 11.7 1.7 2.1 1 1 1 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain DUF16 PF01519.16 ORF88410 - 2.3 8.7 12.2 5.8 7.5 12.2 1.7 1 1 0 1 1 1 0 Protein of unknown function DUF16 GrpE PF01025.19 ORF88410 - 2.3 7.8 18.4 1 9.0 4.7 2.0 1 1 1 2 2 2 0 GrpE ZapB PF06005.12 ORF88410 - 2.5 8.6 16.8 9.1e+02 0.4 16.8 2.3 1 1 0 1 1 1 0 Cell division protein ZapB YabA PF06156.13 ORF88410 - 2.5 8.8 13.0 1.2 9.8 8.4 2.0 1 1 1 2 2 2 0 Initiation control protein YabA Med21 PF11221.8 ORF88410 - 3 8.1 12.4 0.41 10.9 1.1 2.1 1 1 0 2 2 2 0 Subunit 21 of Mediator complex VIT1 PF01988.19 ORF88410 - 4.9 7.0 5.8 7.1 6.4 5.8 1.4 1 1 0 1 1 1 0 VIT family CENP-H PF05837.12 ORF88410 - 5.3 7.5 16.0 4.9 7.6 8.1 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Exonuc_VII_L PF02601.15 ORF88410 - 5.3 6.5 11.6 6.1 6.3 11.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Swi5 PF07061.11 ORF88410 - 5.6 7.1 14.7 2.2 8.4 3.5 2.1 1 1 1 2 2 2 0 Swi5 DUF724 PF05266.14 ORF88410 - 7.7 6.3 14.6 9 6.1 14.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF1482 PF07358.11 ORF88363 - 0.16 11.9 0.8 20 5.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1482) MqsR_toxin PF15723.5 ORF88199 - 2.1e-32 111.3 0.0 2.3e-32 111.2 0.0 1.0 1 0 0 1 1 1 1 Motility quorum-sensing regulator, toxin of MqsA Ribosomal_L37ae PF01780.19 ORF86225 - 5e-30 103.4 2.7 5.8e-30 103.2 2.7 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Ank_4 PF13637.6 ORF86043 - 8.3e-05 23.1 0.0 0.00027 21.4 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (many copies) TFIIE-A_C PF11521.8 ORF86043 - 0.15 12.3 2.9 0.19 12.1 2.9 1.2 1 0 0 1 1 1 0 C-terminal general transcription factor TFIIE alpha YfhO PF09586.10 ORF86043 - 0.21 9.8 0.5 0.22 9.7 0.5 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Orthopox_A36R PF05950.11 ORF86043 - 0.41 10.8 5.3 0.38 10.9 5.3 1.1 1 0 0 1 1 1 0 Orthopoxvirus A36R protein Microvir_H PF04687.12 ORF86042 - 0.13 11.6 0.2 0.16 11.4 0.2 1.1 1 0 0 1 1 1 0 Microvirus H protein (pilot protein) TMF_TATA_bd PF12325.8 ORF85814 - 0.039 14.2 3.7 0.059 13.6 3.7 1.5 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Rdx PF10262.9 ORF84681 - 0.12 12.6 2.1 1.6 9.0 0.1 2.3 2 0 0 2 2 2 0 Rdx family CAAX_1 PF15895.5 ORF84238 - 0.21 11.5 14.2 0.25 11.2 14.2 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 DUF1064 PF06356.11 ORF83135 - 0.024 15.0 0.1 0.026 14.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1064) HTH_3 PF01381.22 ORF82926 - 0.027 14.5 0.0 0.042 13.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix FUSC_2 PF13515.6 ORF82211 - 0.028 14.5 0.6 0.043 13.9 0.6 1.4 1 0 0 1 1 1 0 Fusaric acid resistance protein-like PRIMA1 PF16101.5 ORF80801 - 0.12 12.4 1.7 0.18 11.9 1.7 1.5 1 1 0 1 1 1 0 Proline-rich membrane anchor 1 BCHF PF07284.11 ORF80609 - 0.25 11.4 9.0 0.32 11.0 8.7 1.5 1 1 0 1 1 1 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) Toxin_14 PF07829.11 ORF80197 - 0.0043 17.0 2.0 0.0077 16.2 2.0 1.3 1 0 0 1 1 1 1 Alpha-A conotoxin PIVA-like protein DUF3649 PF12365.8 ORF801 - 3.5 7.4 10.3 1.1 9.1 6.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3649) Toxin_31 PF08119.11 ORF79632 - 1.2 9.0 3.4 0.51 10.1 0.4 2.0 2 1 0 2 2 2 0 Scorpion acidic alpha-KTx toxin family MATalpha_HMGbox PF04769.12 ORF77999 - 0.018 14.3 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box ICAM_N PF03921.14 ORF77915 - 0.056 13.1 0.2 0.067 12.9 0.2 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain ACCA PF03255.14 ORF7774 - 0.17 11.7 6.7 0.19 11.6 4.2 1.9 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Atg14 PF10186.9 ORF7774 - 0.52 9.3 15.0 2.3 7.2 15.0 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF7774 - 0.57 9.0 14.6 0.71 8.7 14.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein OmpH PF03938.14 ORF7774 - 0.62 10.4 19.5 0.92 9.8 19.5 1.4 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Phage_Mu_Gam PF07352.12 ORF7774 - 1.3 8.9 16.6 1.6 8.6 11.0 2.0 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein DHR10 PF18595.1 ORF7774 - 1.6 8.8 21.4 7.1 6.7 21.3 1.8 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain UPF0242 PF06785.11 ORF7774 - 2.2 8.4 16.9 7.8 6.6 14.8 1.8 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Tho2 PF11262.8 ORF7774 - 5.3 6.2 10.6 6 6.0 10.6 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF4407 PF14362.6 ORF7774 - 5.6 6.2 9.8 6.8 6.0 9.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-LITAF-like PF10601.9 ORF76695 - 0.98 9.7 9.3 2.1 8.7 9.3 1.6 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain LrgB PF04172.16 ORF76293 - 1.7e-31 109.4 7.4 1.9e-31 109.2 7.4 1.0 1 0 0 1 1 1 1 LrgB-like family DUF4190 PF13828.6 ORF76293 - 3.4 7.5 19.7 0.18 11.6 6.9 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4190) LIFR_N PF18207.1 ORF75762 - 0.09 13.2 0.6 0.09 13.2 0.6 1.6 2 0 0 2 2 2 0 Leukemia inhibitory factor receptor N-terminal domain DUF5301 PF17225.3 ORF75686 - 0.0086 16.5 1.9 0.011 16.2 1.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5300) Ig_6 PF18452.1 ORF75445 - 0.047 13.3 0.7 0.047 13.3 0.7 1.8 2 0 0 2 2 2 0 Immunoglobulin domain zf_Rg PF17915.1 ORF75264 - 0.049 13.0 4.9 0.39 10.1 0.5 2.6 2 0 0 2 2 2 0 Reverse gyrase zinc finger Ribosomal_L37ae PF01780.19 ORF74810 - 5e-30 103.4 2.7 5.8e-30 103.2 2.7 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family YbjM PF11045.8 ORF74790 - 3.4e-36 124.0 6.2 3.7e-36 123.8 6.2 1.0 1 0 0 1 1 1 1 Putative inner membrane protein of Enterobacteriaceae 5TM-5TMR_LYT PF07694.12 ORF74790 - 0.035 13.6 0.7 0.039 13.5 0.7 1.1 1 0 0 1 1 1 0 5TMR of 5TMR-LYT Sdh5 PF03937.16 ORF74572 - 0.19 11.7 0.0 0.33 10.9 0.0 1.4 1 0 0 1 1 1 0 Flavinator of succinate dehydrogenase SSXRD PF09514.10 ORF7448 - 0.11 12.0 0.4 0.23 11.1 0.4 1.4 1 0 0 1 1 1 0 SSXRD motif CXCL17 PF15211.6 ORF73833 - 0.19 12.5 8.0 0.27 12.0 8.0 1.3 1 0 0 1 1 1 0 VEGF co-regulated chemokine 1 Allexi_40kDa PF05549.11 ORF72825 - 0.29 10.6 12.5 0.38 10.2 12.5 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF3347 PF11827.8 ORF72825 - 2.1 8.5 13.2 2 8.6 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) PCRF PF03462.18 ORF72825 - 2.3 8.1 16.0 5.3 6.9 15.9 1.6 1 1 0 1 1 1 0 PCRF domain T2SSM PF04612.12 ORF72825 - 2.3 8.2 19.0 9.7 6.2 6.3 2.2 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein M HBM PF16591.5 ORF72825 - 3.3 7.0 25.7 0.99 8.8 10.9 2.0 1 1 1 2 2 2 0 Helical bimodular sensor domain Lyase_8_N PF08124.11 ORF72825 - 4.4 6.1 10.3 5 6.0 10.3 1.1 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain tRNA-synt_His PF13393.6 ORF72825 - 5.6 6.1 12.4 8.6 5.5 12.4 1.3 1 1 0 1 1 1 0 Histidyl-tRNA synthetase Adaptin_binding PF10199.9 ORF72825 - 8.3 7.0 18.5 11 6.6 18.5 1.3 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 CM2 PF03021.14 ORF71824 - 0.015 15.1 0.1 0.018 14.9 0.1 1.1 1 0 0 1 1 1 0 Influenza C virus M2 protein DM PF00751.18 ORF71583 - 0.084 12.8 2.6 0.14 12.1 2.6 1.3 1 0 0 1 1 1 0 DM DNA binding domain TraD_N PF12615.8 ORF71065 - 0.061 14.1 0.2 0.071 13.9 0.2 1.1 1 0 0 1 1 1 0 F sex factor protein N terminal Aa_trans PF01490.18 ORF70816 - 6.2e-07 28.5 0.2 6.6e-07 28.4 0.2 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 ORF70816 - 0.024 13.7 0.7 0.028 13.5 0.7 1.0 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family Nup188_C PF18378.1 ORF70816 - 0.069 12.0 0.0 0.071 11.9 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain DnaJ_CXXCXGXG PF00684.19 ORF69728 - 0.018 15.4 1.6 0.032 14.6 1.6 1.5 1 1 0 1 1 1 0 DnaJ central domain Herpes_UL16 PF03044.14 ORF69728 - 0.072 12.4 1.1 0.079 12.2 1.1 1.0 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family DUF5096 PF17019.5 ORF6962 - 0.03 14.1 1.4 0.042 13.6 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5096) SCA7 PF08313.12 ORF69473 - 0.069 13.0 0.3 0.34 10.8 0.2 2.1 2 1 0 2 2 2 0 SCA7, zinc-binding domain EPV_E5 PF08135.11 ORF69431 - 0.022 15.1 0.7 0.022 15.1 0.7 2.5 2 1 1 3 3 3 0 Major transforming protein E5 family Ocular_alb PF02101.15 ORF69345 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein Lin0512_fam PF09585.10 ORF69132 - 0.11 12.6 0.0 0.19 11.8 0.0 1.6 1 1 0 1 1 1 0 Conserved hypothetical protein (Lin0512_fam) DUF4202 PF13875.6 ORF68056 - 0.037 13.9 0.1 0.037 13.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4202) STAR_dimer PF16544.5 ORF6537 - 0.094 12.3 0.8 0.25 11.0 0.1 2.0 3 0 0 3 3 3 0 Homodimerisation region of STAR domain protein UN_NPL4 PF11543.8 ORF65248 - 0.016 15.7 0.1 2.6 8.6 0.0 2.1 1 1 1 2 2 2 0 Nuclear pore localisation protein NPL4 HrcA PF01628.21 ORF65248 - 0.029 14.3 0.1 0.032 14.1 0.1 1.0 1 0 0 1 1 1 0 HrcA protein C terminal domain Borealin PF10512.9 ORF64346 - 0.083 12.9 2.4 0.12 12.4 0.1 1.9 1 1 0 2 2 2 0 Cell division cycle-associated protein 8 DUF5592 PF17332.2 ORF64156 - 0.14 12.7 6.0 0.35 11.4 0.5 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5592) DUF1439 PF07273.12 ORF62034 - 0.015 15.1 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1439) Ribosomal_L2_C PF03947.18 ORF61972 - 0.0029 17.8 0.0 0.0042 17.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Acetyltransf_1 PF00583.25 ORF60954 - 2.2e-17 63.4 0.0 2.7e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF60954 - 3.1e-14 53.0 0.0 3.6e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF60954 - 1e-13 51.5 0.0 1.3e-13 51.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF60954 - 1.8e-12 47.1 0.0 2.2e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 FR47-like protein GNAT_acetyltran PF12746.7 ORF60954 - 2e-07 30.8 0.0 2.3e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_4 PF13420.7 ORF60954 - 2.4e-07 31.0 0.0 2.7e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF60954 - 4.2e-06 26.8 0.0 5.2e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF60954 - 0.00013 21.6 0.0 0.00016 21.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF60954 - 0.00019 22.1 0.0 0.00023 21.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 ORF60954 - 0.00052 19.5 0.0 0.0013 18.3 0.0 1.6 1 1 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_6 PF13480.7 ORF60954 - 0.0016 18.6 0.0 0.0018 18.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF60954 - 0.0029 17.7 0.0 0.0047 17.0 0.0 1.4 1 1 0 1 1 1 1 GCN5-related N-acetyl-transferase GNAT_acetyltr_2 PF13718.6 ORF60954 - 0.021 14.2 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase 2 Nudix_hydro PF18290.1 ORF60954 - 0.031 14.3 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 Nudix hydrolase domain FlgO PF17680.1 ORF60954 - 0.048 13.4 0.0 0.057 13.2 0.0 1.2 1 0 0 1 1 1 0 FlgO protein DUF4005 PF13178.6 ORF60202 - 0.031 14.9 0.0 0.047 14.3 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4005) Aa_trans PF01490.18 ORF60172 - 0.002 16.9 13.0 0.0024 16.7 13.0 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Glutaredoxin PF00462.24 ORF60168 - 1.8e-15 56.9 0.0 2.3e-15 56.5 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 ORF60168 - 0.0004 20.7 0.1 0.00044 20.6 0.1 1.3 1 1 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_2 PF13098.6 ORF60168 - 0.0012 19.3 0.1 0.0015 19.0 0.1 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain DSBA PF01323.20 ORF60168 - 0.012 15.4 0.0 0.033 14.0 0.0 1.7 1 1 1 2 2 2 0 DSBA-like thioredoxin domain GST_N_3 PF13417.6 ORF60168 - 0.014 15.8 0.0 0.016 15.6 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin PF00085.20 ORF60168 - 0.025 14.6 0.0 0.029 14.4 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin Thioredoxin_3 PF13192.6 ORF60168 - 0.037 14.1 0.3 0.055 13.5 0.3 1.6 1 1 0 1 1 1 0 Thioredoxin domain Thioredoxin_4 PF13462.6 ORF60168 - 0.096 12.8 0.4 0.95 9.6 0.3 2.0 1 1 1 2 2 2 0 Thioredoxin Preseq_ALAS PF09029.10 ORF59724 - 0.061 13.8 0.0 0.067 13.7 0.0 1.1 1 0 0 1 1 1 0 5-aminolevulinate synthase presequence Lectin_leg-like PF03388.13 ORF57980 - 0.16 11.3 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Legume-like lectin family EF-hand_7 PF13499.6 ORF57939 - 7.5e-12 45.5 0.0 1.1e-11 45.0 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF57939 - 2.6e-11 42.2 0.9 0.0002 20.7 0.0 2.9 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF57939 - 7.7e-09 34.8 0.1 0.0016 18.2 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF57939 - 5.8e-08 32.5 0.1 9.1e-06 25.4 0.0 2.5 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF57939 - 1.1e-06 27.8 0.3 0.014 14.9 0.0 2.7 2 0 0 2 2 2 2 EF hand EF-hand_10 PF14788.6 ORF57939 - 0.00033 20.4 1.1 0.13 12.1 0.2 2.4 2 0 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF57939 - 0.0045 16.9 0.1 0.014 15.3 0.0 1.7 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF57939 - 0.017 15.4 0.2 5.9 7.2 0.0 2.1 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF57939 - 0.079 13.3 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain DUF3349 PF11829.8 ORF57939 - 0.15 12.8 0.1 0.19 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3349) Ribosomal_S27e PF01667.17 ORF5680 - 0.012 15.3 0.5 0.021 14.5 0.5 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 VSG_B PF13206.6 ORF55946 - 0.019 14.3 0.1 0.019 14.2 0.1 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain Rubi_NSP_C PF12601.8 ORF5389 - 0.083 13.0 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Rubivirus non-structural protein Allexi_40kDa PF05549.11 ORF52851 - 0.29 10.6 12.5 0.38 10.2 12.5 1.2 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF3347 PF11827.8 ORF52851 - 2.1 8.5 13.2 2 8.6 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3347) PCRF PF03462.18 ORF52851 - 2.3 8.1 16.0 5.3 6.9 15.9 1.6 1 1 0 1 1 1 0 PCRF domain T2SSM PF04612.12 ORF52851 - 2.3 8.2 19.0 9.7 6.2 6.3 2.2 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein M HBM PF16591.5 ORF52851 - 3.3 7.0 25.7 0.99 8.8 10.9 2.0 1 1 1 2 2 2 0 Helical bimodular sensor domain Lyase_8_N PF08124.11 ORF52851 - 4.4 6.1 10.3 5 6.0 10.3 1.1 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain tRNA-synt_His PF13393.6 ORF52851 - 5.6 6.1 12.4 8.6 5.5 12.4 1.3 1 1 0 1 1 1 0 Histidyl-tRNA synthetase Adaptin_binding PF10199.9 ORF52851 - 8.3 7.0 18.5 11 6.6 18.5 1.3 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Folate_rec PF03024.14 ORF52476 - 0.0074 16.2 1.1 0.0078 16.1 1.1 1.2 1 0 0 1 1 1 1 Folate receptor family Colicin_Ia PF11504.8 ORF51360 - 0.08 13.1 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 Colicin Ia zf-RING_2 PF13639.6 ORF5124 - 1.1e-08 35.2 2.4 2.2e-08 34.3 2.4 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF5124 - 2.5e-07 30.4 2.0 4.6e-07 29.6 2.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF5124 - 3.3e-07 30.5 3.5 7.3e-07 29.4 3.5 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF5124 - 6.3e-07 29.3 1.6 1.3e-06 28.3 1.6 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF5124 - 2.2e-06 27.3 6.1 3.2e-06 26.7 3.7 2.2 2 0 0 2 2 2 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF5124 - 0.00011 21.8 1.8 0.00018 21.0 1.8 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF5124 - 0.00028 20.9 0.8 0.00037 20.5 0.8 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF5124 - 0.00032 20.5 2.5 0.00071 19.4 2.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF5124 - 0.00069 19.5 2.3 0.0013 18.7 2.3 1.5 1 0 0 1 1 1 1 zinc-RING finger domain Zf_RING PF16744.5 ORF5124 - 0.0046 17.0 2.6 0.0099 16.0 2.5 1.6 1 1 0 1 1 1 1 KIAA1045 RING finger zf-C3HC4_3 PF13920.6 ORF5124 - 0.011 15.5 1.0 0.018 14.9 1.0 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 ORF5124 - 0.012 15.5 1.2 0.023 14.6 1.2 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 RINGv PF12906.7 ORF5124 - 0.026 14.7 3.2 0.059 13.5 3.2 1.6 1 0 0 1 1 1 0 RING-variant domain PHD PF00628.29 ORF5124 - 0.033 14.1 2.2 0.063 13.2 2.2 1.5 1 0 0 1 1 1 0 PHD-finger zf-C3HC4_4 PF15227.6 ORF5124 - 0.039 14.1 1.6 0.21 11.8 1.6 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 ORF5124 - 0.049 13.8 5.8 0.12 12.6 4.1 2.2 1 1 1 2 2 2 0 FANCL C-terminal domain WAC_Acf1_DNA_bd PF10537.9 ORF50422 - 0.052 14.1 0.9 0.085 13.4 0.1 1.7 1 1 1 2 2 2 0 ATP-utilising chromatin assembly and remodelling N-terminal Membralin PF09746.9 ORF50422 - 0.19 10.7 2.0 0.23 10.5 2.0 1.0 1 0 0 1 1 1 0 Tumour-associated protein DUF3899 PF13038.6 ORF50422 - 4.5 7.8 7.5 1.6 9.3 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3899) Sec62 PF03839.16 ORF50422 - 5.7 6.4 7.6 6.1 6.3 7.6 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 DM PF00751.18 ORF50370 - 0.084 12.8 2.6 0.14 12.1 2.6 1.3 1 0 0 1 1 1 0 DM DNA binding domain Kinesin_assoc PF16183.5 ORF50165 - 0.00067 19.9 3.0 0.00078 19.6 3.0 1.0 1 0 0 1 1 1 1 Kinesin-associated PKcGMP_CC PF16808.5 ORF50165 - 0.017 14.9 5.8 1.6 8.6 0.8 2.5 1 1 1 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Tox-REase-2 PF15646.6 ORF50165 - 0.024 14.8 3.0 0.029 14.6 3.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 DUF3287 PF11690.8 ORF50165 - 0.025 14.3 1.0 0.028 14.1 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) Spc42p PF11544.8 ORF50165 - 0.039 14.0 1.5 0.039 14.0 1.5 1.8 1 1 1 2 2 2 0 Spindle pole body component Spc42p SlyX PF04102.12 ORF50165 - 0.085 13.5 1.8 0.16 12.6 1.8 1.5 1 0 0 1 1 1 0 SlyX His_binding PF02098.16 ORF50165 - 0.087 12.9 2.3 0.11 12.5 2.3 1.2 1 0 0 1 1 1 0 Tick histamine binding protein Hjc PF01870.18 ORF50165 - 0.1 12.6 0.8 0.15 12.1 0.8 1.5 1 1 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) eIF3_N PF09440.10 ORF50165 - 0.15 12.5 6.1 0.16 12.4 6.1 1.0 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain DivIC PF04977.15 ORF50165 - 0.17 11.7 3.4 0.22 11.3 1.6 1.9 1 1 1 2 2 2 0 Septum formation initiator Fib_alpha PF08702.10 ORF50165 - 0.34 11.1 7.9 0.41 10.8 7.9 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF50165 - 0.66 9.2 5.9 0.69 9.1 5.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein FAM76 PF16046.5 ORF50165 - 1 8.7 7.8 1.1 8.5 7.8 1.0 1 0 0 1 1 1 0 FAM76 protein TMF_DNA_bd PF12329.8 ORF50165 - 6 6.9 12.4 1.7 8.7 1.8 2.7 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding GPR15L PF15854.5 ORF49821 - 0.38 11.0 11.6 0.54 10.5 5.8 2.1 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 Ntox43 PF15537.6 ORF48645 - 0.06 13.4 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial toxin 43 DUF4775 PF16001.5 ORF47926 - 1.1 8.6 4.9 4.2 6.7 3.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4775) Ras PF00071.22 ORF47056 - 1.3e-10 41.1 0.0 1.4e-10 41.0 0.0 1.0 1 0 0 1 1 1 1 Ras family ERO1 PF04137.15 ORF45674 - 2.1e-06 27.2 2.7 2.4e-06 27.0 0.2 1.9 1 1 1 2 2 2 1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) YEATS PF03366.16 ORF45481 - 0.11 12.4 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 YEATS family Ion_trans_2 PF07885.16 ORF44472 - 1.1 9.3 4.3 1.1 9.3 1.7 1.9 2 0 0 2 2 2 0 Ion channel Nic96 PF04097.14 ORF43991 - 0.062 11.7 0.1 0.069 11.6 0.1 1.1 1 0 0 1 1 1 0 Nup93/Nic96 zf-like PF04071.12 ORF43700 - 0.055 13.4 1.9 0.074 13.0 1.9 1.2 1 0 0 1 1 1 0 Cysteine-rich small domain DnaJ_CXXCXGXG PF00684.19 ORF43700 - 0.13 12.6 4.6 0.33 11.3 2.8 2.1 2 0 0 2 2 2 0 DnaJ central domain ABC2_membrane PF01061.24 ORF43540 - 8.6e-07 28.6 8.9 9.9e-07 28.4 8.9 1.0 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF43540 - 2.1 7.4 8.5 2.2 7.3 8.5 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein TMEM173 PF15009.6 ORF42632 - 2.4 7.2 5.2 2.6 7.1 5.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 173 Tristanin_u2 PF16638.5 ORF41927 - 0.16 12.8 1.0 0.22 12.4 1.0 1.2 1 0 0 1 1 1 0 Unstructured region on methyltransferase between zinc-fingers Sel1 PF08238.12 ORF4141 - 1.1e-15 57.6 12.2 1.3e-09 38.4 0.3 3.1 3 0 0 3 3 3 3 Sel1 repeat TPR_1 PF00515.28 ORF4141 - 0.025 14.4 11.7 3.3 7.7 0.7 4.4 4 1 1 5 5 5 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF4141 - 0.042 14.1 1.5 0.57 10.5 1.5 2.6 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF4141 - 0.22 12.0 3.4 1.3 9.6 0.5 2.8 2 2 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF4141 - 7 7.0 12.9 3.7 7.9 0.1 4.0 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF4141 - 7.7 7.0 11.0 10 6.6 1.4 3.9 4 1 0 4 4 4 0 Tetratricopeptide repeat TTC5_OB PF16669.5 ORF41241 - 0.027 14.2 0.5 0.035 13.8 0.5 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat protein 5 OB fold domain SecE PF00584.20 ORF39553 - 0.24 11.4 0.5 0.44 10.5 0.5 1.4 1 0 0 1 1 1 0 SecE/Sec61-gamma subunits of protein translocation complex CLN6 PF15156.6 ORF39394 - 0.014 14.7 0.0 0.015 14.6 0.0 1.0 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 6 Lipoprotein_17 PF04200.12 ORF39394 - 0.76 10.2 10.3 1.4 9.3 10.3 1.5 1 1 0 1 1 1 0 Lipoprotein associated domain Glyco_hydro_59M PF17387.2 ORF3799 - 0.0037 17.4 0.7 0.0044 17.2 0.7 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 59 central domain NLE PF08154.12 ORF37386 - 0.14 12.7 0.4 0.53 10.8 0.0 2.0 2 0 0 2 2 2 0 NLE (NUC135) domain Ocular_alb PF02101.15 ORF37213 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein NAD_binding_3 PF03447.16 ORF37028 - 0.038 14.6 0.0 0.13 12.9 0.0 1.7 2 0 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain DUF4211 PF13926.6 ORF370 - 2.2 8.3 3.7 0.9 9.6 1.0 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4211) CBS PF00571.28 ORF34874 - 1.1e-08 35.3 0.1 2.1e-07 31.3 0.0 2.0 2 0 0 2 2 2 1 CBS domain DUF4399 PF14347.6 ORF34874 - 0.1 13.0 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4399) Toxin_31 PF08119.11 ORF3480 - 1.2 9.0 3.4 0.51 10.1 0.4 2.0 2 1 0 2 2 2 0 Scorpion acidic alpha-KTx toxin family MVL PF12151.8 ORF34297 - 0.00097 18.9 1.5 0.002 17.9 1.5 1.5 1 0 0 1 1 1 1 Mannan-binding protein SR-25 PF10500.9 ORF34297 - 2 8.0 4.8 2.2 7.8 4.8 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein TB PF00683.17 ORF34279 - 0.069 12.9 0.3 0.069 12.9 0.3 2.9 3 0 0 3 3 3 0 TB domain VATC PF18716.1 ORF34152 - 0.31 10.9 2.1 0.35 10.8 1.0 1.6 2 0 0 2 2 2 0 Vms1-associating treble clef domain DUF2271 PF10029.9 ORF33922 - 0.25 11.0 0.0 0.32 10.6 0.0 1.1 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) DUF4620 PF15399.6 ORF339 - 0.56 10.6 5.7 0.35 11.2 1.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4620) BT1 PF03092.16 ORF33459 - 0.0047 15.2 0.0 0.0054 15.0 0.0 1.0 1 0 0 1 1 1 1 BT1 family DUF1772 PF08592.11 ORF33459 - 0.024 15.0 0.0 0.024 15.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) Xol-1_GHMP-like PF09109.10 ORF33305 - 0.046 13.6 1.6 0.083 12.8 1.6 1.6 1 1 0 1 1 1 0 Switch protein XOL-1, GHMP-like Molybdopterin_N PF18364.1 ORF3322 - 0.046 13.8 0.2 0.08 13.0 0.2 1.4 1 0 0 1 1 1 0 Molybdopterin oxidoreductase N-terminal domain KdpC PF02669.15 ORF32127 - 0.2 11.5 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 K+-transporting ATPase, c chain RRF PF01765.19 ORF31365 - 2e-14 53.8 0.2 2.2e-14 53.7 0.2 1.0 1 0 0 1 1 1 1 Ribosome recycling factor CAP59_mtransfer PF11735.8 ORF31365 - 0.072 12.8 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 Cryptococcal mannosyltransferase 1 Romo1 PF10247.9 ORF31314 - 0.067 13.6 2.6 0.17 12.3 2.6 1.7 1 1 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 DUF2633 PF11119.8 ORF30592 - 3.4 7.6 4.9 1.5 8.8 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2633) DUF5572 PF17733.1 ORF29360 - 1.5 8.7 4.2 0.41 10.5 0.7 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5572) bPH_4 PF06713.11 ORF29264 - 0.041 14.0 0.3 0.098 12.8 0.1 1.7 2 0 0 2 2 2 0 Bacterial PH domain DUF4790 PF16037.5 ORF29262 - 0.14 12.7 0.1 0.24 11.9 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4790) DUF1137 PF06587.11 ORF28991 - 0.067 13.2 0.7 0.087 12.9 0.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1137) DUF3556 PF12077.8 ORF27088 - 0.00065 18.3 0.0 0.00067 18.2 0.0 1.0 1 0 0 1 1 1 1 Transmembrane protein of unknown function (DUF3556) Csm1_N PF18504.1 ORF27070 - 0.0062 16.8 4.6 0.051 13.9 2.1 2.3 1 1 1 2 2 2 2 Csm1 N-terminal domain Macoilin PF09726.9 ORF27070 - 0.019 13.5 2.4 0.021 13.4 2.4 1.0 1 0 0 1 1 1 0 Macoilin family Mod_r PF07200.13 ORF27070 - 0.031 14.4 5.1 0.037 14.1 5.1 1.0 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein ZapB PF06005.12 ORF27070 - 0.033 14.6 2.6 0.033 14.6 2.6 1.7 1 1 0 1 1 1 0 Cell division protein ZapB bZIP_2 PF07716.15 ORF27070 - 0.11 12.6 1.9 0.21 11.7 0.1 2.1 1 1 0 2 2 2 0 Basic region leucine zipper DivIVA PF05103.13 ORF27070 - 0.11 12.6 3.9 0.12 12.4 3.3 1.3 1 1 0 1 1 1 0 DivIVA protein LSM PF01423.22 ORF26971 - 1.4e-20 72.8 0.8 1.7e-20 72.5 0.8 1.1 1 0 0 1 1 1 1 LSM domain PARG_cat PF05028.14 ORF26898 - 0.036 13.4 2.0 0.036 13.4 2.0 1.3 1 1 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) Preseq_ALAS PF09029.10 ORF264 - 0.061 13.8 0.0 0.067 13.7 0.0 1.1 1 0 0 1 1 1 0 5-aminolevulinate synthase presequence AP-5_subunit_s1 PF15001.6 ORF25915 - 0.13 12.2 0.6 0.14 12.1 0.6 1.0 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 ATP19 PF11022.8 ORF25915 - 2.2 8.7 6.9 8.3 6.9 6.9 1.9 1 1 0 1 1 1 0 ATP synthase subunit K Ocular_alb PF02101.15 ORF25465 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein Ocular_alb PF02101.15 ORF25395 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein DUF4834 PF16118.5 ORF2487 - 0.04 14.9 2.7 0.055 14.4 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) ECH_2 PF16113.5 ORF24823 - 5.2e-22 78.8 0.0 5.8e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DM PF00751.18 ORF23105 - 0.084 12.8 2.6 0.14 12.1 2.6 1.3 1 0 0 1 1 1 0 DM DNA binding domain Ion_trans PF00520.31 ORF21958 - 0.042 13.1 0.1 0.049 12.8 0.1 1.1 1 0 0 1 1 1 0 Ion transport protein DUF2569 PF10754.9 ORF21626 - 0.0069 16.8 1.0 0.0074 16.7 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2569) DUF4131 PF13567.6 ORF21626 - 0.099 12.3 0.7 0.11 12.1 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Speriolin_C PF15059.6 ORF21626 - 0.6 10.2 2.8 0.36 10.9 0.6 1.6 1 1 1 2 2 2 0 Speriolin C-terminus DUF2633 PF11119.8 ORF20742 - 3.4 7.6 4.9 1.5 8.8 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2633) DUF2427 PF10348.9 ORF2059 - 0.18 11.6 5.5 0.2 11.5 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2427) Ocular_alb PF02101.15 ORF20335 - 0.32 9.8 0.6 0.33 9.8 0.6 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein Spb1_C PF07780.12 ORF19716 - 1.4e-13 51.0 14.5 1.8e-13 50.6 14.5 1.2 1 0 0 1 1 1 1 Spb1 C-terminal domain DBR1 PF05011.13 ORF19716 - 0.03 14.7 0.9 0.035 14.5 0.9 1.2 1 0 0 1 1 1 0 Lariat debranching enzyme, C-terminal domain DUF1413 PF07205.11 ORF18724 - 0.15 12.1 0.1 0.29 11.2 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1413) Csm1_N PF18504.1 ORF16175 - 0.0062 16.8 4.6 0.051 13.9 2.1 2.3 1 1 1 2 2 2 2 Csm1 N-terminal domain Macoilin PF09726.9 ORF16175 - 0.019 13.5 2.4 0.021 13.4 2.4 1.0 1 0 0 1 1 1 0 Macoilin family Mod_r PF07200.13 ORF16175 - 0.031 14.4 5.1 0.037 14.1 5.1 1.0 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein ZapB PF06005.12 ORF16175 - 0.033 14.6 2.6 0.033 14.6 2.6 1.7 1 1 0 1 1 1 0 Cell division protein ZapB bZIP_2 PF07716.15 ORF16175 - 0.11 12.6 1.9 0.21 11.7 0.1 2.1 1 1 0 2 2 2 0 Basic region leucine zipper DivIVA PF05103.13 ORF16175 - 0.11 12.6 3.9 0.12 12.4 3.3 1.3 1 1 0 1 1 1 0 DivIVA protein PPDFL PF15060.6 ORF15849 - 0.045 14.3 0.0 0.052 14.1 0.0 1.2 1 0 0 1 1 1 0 Differentiation and proliferation regulator MA3 PF02847.17 ORF151945 - 0.041 13.9 1.3 0.09 12.8 1.3 1.7 1 1 0 1 1 1 0 MA3 domain MH1 PF03165.16 ORF151389 - 0.015 15.5 0.3 0.017 15.3 0.3 1.1 1 0 0 1 1 1 0 MH1 domain CbtA_toxin PF06755.12 ORF151389 - 0.09 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 CbtA_toxin of type IV toxin-antitoxin system Defensin_beta PF00711.19 ORF150569 - 0.23 11.5 7.3 1.4 9.0 2.3 3.0 3 0 0 3 3 3 0 Beta defensin DM PF00751.18 ORF149594 - 0.084 12.8 2.6 0.14 12.1 2.6 1.3 1 0 0 1 1 1 0 DM DNA binding domain Exo_endo_phos PF03372.23 ORF149588 - 0.011 15.3 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family DZR PF12773.7 ORF14866 - 0.0056 16.7 0.3 0.011 15.7 0.3 1.5 1 0 0 1 1 1 1 Double zinc ribbon DUF1869 PF08956.10 ORF14866 - 0.0096 15.8 0.2 0.016 15.1 0.2 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF1869) zf-BED PF02892.15 ORF14866 - 0.012 15.6 4.4 0.33 11.0 0.2 2.4 1 1 1 2 2 2 0 BED zinc finger NapB PF03892.14 ORF14866 - 0.061 13.3 2.6 0.067 13.2 2.6 1.3 1 1 0 1 1 1 0 Nitrate reductase cytochrome c-type subunit (NapB) zf-ribbon_3 PF13248.6 ORF14866 - 1 8.8 4.8 2.3 7.7 0.1 2.8 3 0 0 3 3 3 0 zinc-ribbon domain Claudin_3 PF06653.11 ORF147304 - 0.038 13.9 9.9 0.04 13.9 9.9 1.1 1 0 0 1 1 1 0 Tight junction protein, Claudin-like TMEM132D_C PF15706.5 ORF147304 - 0.082 12.7 1.0 0.16 11.8 1.0 1.5 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF1324 PF07038.11 ORF145714 - 0.059 13.6 0.4 0.1 12.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1324) Ribosomal_L37ae PF01780.19 ORF145615 - 5e-30 103.4 2.7 5.8e-30 103.2 2.7 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Dpy-30 PF05186.13 ORF145609 - 0.0045 16.7 0.0 0.0071 16.0 0.0 1.4 1 0 0 1 1 1 1 Dpy-30 motif DUF5586 PF17824.1 ORF145609 - 0.094 11.8 0.0 0.097 11.8 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5586) SBP56 PF05694.11 ORF145609 - 0.17 10.6 0.2 0.45 9.3 0.1 1.6 1 1 1 2 2 2 0 56kDa selenium binding protein (SBP56) MLANA PF14991.6 ORF145216 - 0.12 12.6 0.6 0.15 12.3 0.6 1.2 1 0 0 1 1 1 0 Protein melan-A DUF4337 PF14235.6 ORF144337 - 1.8 8.7 5.5 2.2 8.3 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) UPF0506 PF11703.8 ORF143312 - 0.11 12.9 0.8 0.17 12.3 0.8 1.3 1 0 0 1 1 1 0 UPF0506 Acetyltransf_11 PF13720.6 ORF140798 - 0.032 14.7 0.4 0.05 14.1 0.4 1.3 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SSXRD PF09514.10 ORF13926 - 0.11 12.0 0.4 0.23 11.1 0.4 1.4 1 0 0 1 1 1 0 SSXRD motif PRORP PF16953.5 ORF139136 - 4.4e-06 26.4 0.3 5.2e-06 26.2 0.3 1.1 1 0 0 1 1 1 1 Protein-only RNase P DUF4191 PF13829.6 ORF138829 - 1.2 8.5 4.6 1.4 8.2 4.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF1054 PF06335.12 ORF138700 - 0.22 11.4 7.6 0.25 11.3 7.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Iron_permease PF04120.12 ORF138700 - 8.4 6.2 7.3 1.5 8.6 2.6 1.8 1 1 1 2 2 2 0 Low affinity iron permease FAM194 PF14977.6 ORF137995 - 0.01 15.1 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 0 FAM194 protein Importin_rep_6 PF18829.1 ORF137562 - 0.011 15.9 0.3 0.013 15.6 0.3 1.2 1 0 0 1 1 1 0 Importin repeat 6 COX6C PF02937.15 ORF137562 - 0.11 12.7 0.3 0.18 12.0 0.3 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc Gpr1_Fun34_YaaH PF01184.19 ORF137116 - 0.68 9.5 8.5 1.1 8.8 8.5 1.4 1 1 0 1 1 1 0 GPR1/FUN34/yaaH family DUF4131 PF13567.6 ORF137116 - 1.5 8.4 6.6 1.9 8.1 6.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2733 PF10813.8 ORF136095 - 0.16 11.8 1.8 0.28 11.0 1.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) MgtE PF01769.16 ORF135739 - 0.2 12.0 3.0 0.23 11.8 3.0 1.1 1 0 0 1 1 1 0 Divalent cation transporter Bacteriocin_IIc PF10439.9 ORF135321 - 5 7.3 10.9 2.5 8.3 0.9 2.3 2 1 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide Ribosomal_L37ae PF01780.19 ORF135318 - 5e-30 103.4 2.7 5.8e-30 103.2 2.7 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family GPI2 PF06432.11 ORF133658 - 0.028 13.9 3.2 0.031 13.7 3.2 1.1 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase DUF4133 PF13571.6 ORF133658 - 0.59 10.5 3.9 0.91 9.9 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) TMEM247 PF15444.6 ORF133658 - 0.65 10.0 5.9 0.76 9.8 5.9 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 GH101_N PF17995.1 ORF133465 - 0.027 14.1 1.7 2.6 7.7 0.3 1.9 1 1 1 2 2 2 0 Endo-alpha-N-acetylgalactosaminidase N-terminal Pur_DNA_glyco PF02245.16 ORF133287 - 0.078 12.4 0.0 0.084 12.3 0.0 1.0 1 0 0 1 1 1 0 Methylpurine-DNA glycosylase (MPG) MFS_1 PF07690.16 ORF131488 - 7.8e-05 21.7 0.0 7.8e-05 21.7 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily EGF_3 PF12947.7 ORF131348 - 0.17 12.1 8.4 0.37 11.0 8.4 1.6 1 0 0 1 1 1 0 EGF domain FtsQ PF03799.15 ORF131259 - 0.016 16.1 0.1 0.017 15.9 0.1 1.1 1 0 0 1 1 1 0 Cell division protein FtsQ Protocadherin PF08374.11 ORF131259 - 0.039 13.9 1.7 0.039 13.9 1.7 1.1 1 0 0 1 1 1 0 Protocadherin IBD PF10416.9 ORF131259 - 0.16 12.0 6.1 0.93 9.5 6.1 1.9 1 1 0 1 1 1 0 Transcription-initiator DNA-binding domain IBD DUF2244 PF10003.9 ORF131259 - 0.24 11.0 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) MFS_1_like PF12832.7 ORF131122 - 0.0026 16.7 0.7 0.0048 15.8 0.7 1.5 1 1 0 1 1 1 1 MFS_1 like family DUF4395 PF14340.6 ORF131122 - 0.0033 17.8 2.8 0.0041 17.5 2.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4395) YqzM PF14141.6 ORF131122 - 0.08 13.0 2.7 0.094 12.8 0.8 2.0 3 0 0 3 3 3 0 YqzM-like protein DUF3671 PF12420.8 ORF131122 - 0.085 12.9 3.4 0.18 11.9 3.4 1.6 1 1 0 1 1 1 0 Protein of unknown function TetR_C_2 PF08361.11 ORF130453 - 3.5e-27 94.9 0.1 4e-27 94.7 0.1 1.1 1 0 0 1 1 1 1 MAATS-type transcriptional repressor, C-terminal region TetR_C_4 PF08359.11 ORF130453 - 2.4e-06 27.8 0.1 3e-06 27.4 0.1 1.2 1 0 0 1 1 1 1 YsiA-like protein, C-terminal region GntR PF00392.21 ORF130453 - 0.06 13.0 0.0 0.092 12.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family GST_C_5 PF16865.5 ORF130453 - 0.1 13.2 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Membralin PF09746.9 ORF129811 - 0.00066 18.8 0.9 0.00073 18.7 0.9 1.1 1 0 0 1 1 1 1 Tumour-associated protein ETRAMP PF09716.10 ORF129811 - 0.012 15.6 0.1 0.019 15.0 0.1 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF2207 PF09972.9 ORF129811 - 0.028 13.2 1.0 0.028 13.2 1.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4191 PF13829.6 ORF129811 - 0.2 11.0 0.4 0.21 10.9 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF3810 PF12725.7 ORF129811 - 0.21 10.9 0.3 0.25 10.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF4492 PF14899.6 ORF129811 - 0.56 10.2 5.7 0.39 10.7 2.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4492) GAS2 PF02187.17 ORF128351 - 1.8e-08 34.3 0.4 2.9e-08 33.7 0.1 1.5 2 0 0 2 2 2 1 Growth-Arrest-Specific Protein 2 Domain HAUS-augmin3 PF14932.6 ORF127568 - 0.0083 15.7 2.8 0.0095 15.5 2.8 1.1 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 DUF4269 PF14091.6 ORF127568 - 0.0094 16.2 0.3 0.012 15.9 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4269) DUF3560 PF12083.8 ORF127568 - 0.015 15.4 3.1 0.016 15.3 2.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3560) Cgr1 PF03879.14 ORF127568 - 0.049 14.0 6.7 0.057 13.8 6.7 1.1 1 0 0 1 1 1 0 Cgr1 family Spc24 PF08286.11 ORF127568 - 0.37 11.0 6.0 0.48 10.7 6.0 1.3 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 APG6_N PF17675.1 ORF127568 - 0.38 11.3 11.4 0.72 10.4 11.4 1.5 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF4672 PF15716.5 ORF127094 - 0.24 11.0 1.0 0.35 10.5 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) Diphthami_syn_2 PF01902.17 ORF127075 - 0.17 11.4 0.3 0.22 11.0 0.3 1.2 1 0 0 1 1 1 0 Diphthamide synthase Activator_LAG-3 PF11498.8 ORF126003 - 0.23 10.4 1.0 0.23 10.4 1.0 1.0 1 0 0 1 1 1 0 Transcriptional activator LAG-3 DUF4337 PF14235.6 ORF12599 - 1.8 8.7 5.5 2.2 8.3 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF5420 PF17457.2 ORF125707 - 0.002 18.0 1.3 0.0024 17.8 1.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5420) Sigma_M_inh PF17453.2 ORF124000 - 0.13 12.7 2.7 0.19 12.2 2.7 1.3 1 1 0 1 1 1 0 Sigma-M inhibitor DHDPS PF00701.22 ORF123459 - 5.2e-32 110.7 0.0 5.7e-32 110.6 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family YCII PF03795.14 ORF123459 - 0.13 12.7 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 YCII-related domain DUF1137 PF06587.11 ORF123263 - 0.067 13.2 0.7 0.087 12.9 0.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1137) Toxin_31 PF08119.11 ORF12130 - 1.2 9.0 3.4 0.51 10.1 0.4 2.0 2 1 0 2 2 2 0 Scorpion acidic alpha-KTx toxin family PTH2 PF01981.16 ORF121081 - 2.7e-16 59.9 0.0 3.5e-16 59.5 0.0 1.2 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Resistin PF06954.11 ORF121081 - 0.071 13.7 1.8 0.12 12.9 1.8 1.5 1 1 0 1 1 1 0 Resistin Fimbrial PF00419.20 ORF120020 - 0.00042 20.6 4.0 0.00046 20.5 4.0 1.0 1 0 0 1 1 1 1 Fimbrial protein TnpV PF14198.6 ORF119281 - 0.11 12.5 0.4 0.18 11.8 0.4 1.4 1 1 0 1 1 1 0 Transposon-encoded protein TnpV DUF4164 PF13747.6 ORF119108 - 6e-05 23.2 2.2 0.00015 22.0 1.5 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4164) zf-C4H2 PF10146.9 ORF119108 - 0.00061 20.2 4.8 0.00066 20.0 4.8 1.0 1 0 0 1 1 1 1 Zinc finger-containing protein Vps54_N PF10475.9 ORF119108 - 0.0044 16.4 2.1 0.0044 16.3 0.9 1.5 1 1 0 1 1 1 1 Vacuolar-sorting protein 54, of GARP complex DUF3552 PF12072.8 ORF119108 - 0.0061 16.0 2.2 0.0071 15.8 2.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) CENP-F_leu_zip PF10473.9 ORF119108 - 0.014 15.4 6.2 0.071 13.1 2.3 2.1 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cep57_CLD_2 PF14197.6 ORF119108 - 0.02 15.0 1.1 0.02 15.0 1.1 1.8 1 1 0 2 2 2 0 Centrosome localisation domain of PPC89 DUF5082 PF16888.5 ORF119108 - 0.024 14.9 6.8 0.17 12.2 0.5 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) FliJ PF02050.16 ORF119108 - 0.026 14.7 4.8 0.035 14.3 4.8 1.2 1 0 0 1 1 1 0 Flagellar FliJ protein HlyE PF06109.13 ORF119108 - 0.046 13.0 2.4 0.09 12.1 2.4 1.5 1 1 0 1 1 1 0 Haemolysin E (HlyE) DUF3053 PF11254.8 ORF119108 - 0.057 13.0 5.8 0.23 11.0 5.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3053) OmpH PF03938.14 ORF119108 - 0.072 13.4 5.1 0.11 12.9 5.1 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF2993 PF11209.8 ORF119108 - 0.091 13.0 0.0 0.11 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2993) TMPIT PF07851.13 ORF119108 - 0.1 11.9 2.6 0.12 11.6 2.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein Tup_N PF08581.10 ORF119108 - 0.25 11.6 5.1 0.22 11.8 2.1 2.0 1 1 1 2 2 2 0 Tup N-terminal DUF4200 PF13863.6 ORF119108 - 0.26 11.7 5.0 0.58 10.6 1.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) ABC_tran_CTD PF16326.5 ORF119108 - 0.44 10.8 3.9 6.4 7.1 3.3 2.4 1 1 0 1 1 1 0 ABC transporter C-terminal domain BRE1 PF08647.11 ORF119108 - 0.49 10.5 8.0 0.16 12.0 3.1 1.9 1 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase DUF1664 PF07889.12 ORF119108 - 0.77 9.8 4.7 2.3 8.3 1.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DASH_Dam1 PF08653.10 ORF119108 - 2.4 8.0 6.7 14 5.5 0.9 2.6 2 2 0 2 2 2 0 DASH complex subunit Dam1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks273.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks273.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks273.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks273.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FCD PF07729.12 ORF115990 - 1.2e-14 54.8 6.1 1.3e-14 54.7 6.1 1.0 1 0 0 1 1 1 1 FCD domain Pox_A32 PF04665.12 ORF115990 - 0.034 13.6 0.0 0.039 13.4 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A32 protein DUF5058 PF16481.5 ORF115581 - 0.0044 16.7 1.5 0.0051 16.5 1.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5058) Transposase_1 PF01359.18 ORF115581 - 0.018 14.9 0.1 0.028 14.3 0.1 1.3 1 0 0 1 1 1 0 Transposase (partial DDE domain) Gas_vesicle PF00741.18 ORF114996 - 0.16 12.1 0.6 0.34 11.1 0.4 1.6 1 1 0 1 1 1 0 Gas vesicle protein SieB PF14163.6 ORF114996 - 2 7.9 4.9 2.7 7.5 4.9 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B ORC5_C PF14630.6 ORF114389 - 0.1 12.1 0.5 0.12 11.9 0.5 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus GPR15L PF15854.5 ORF114109 - 0.38 11.0 11.6 0.54 10.5 5.8 2.1 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 APC_r PF05923.12 ORF111195 - 0.011 15.4 0.0 0.024 14.3 0.0 1.5 1 0 0 1 1 1 0 APC repeat DUF1482 PF07358.11 ORF111127 - 0.16 11.9 0.8 20 5.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1482) IGR PF09597.10 ORF109801 - 1.2e-15 57.4 0.1 1.8e-15 56.8 0.1 1.3 1 0 0 1 1 1 1 IGR protein motif ABG_transport PF03806.13 ORF109173 - 0.39 8.9 6.0 0.42 8.8 6.0 1.0 1 0 0 1 1 1 0 AbgT putative transporter family DUF2194 PF09960.9 ORF107394 - 0.053 11.9 0.1 0.055 11.8 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2194) GvpG PF05120.12 ORF107329 - 0.025 14.6 0.5 0.081 13.0 0.5 1.8 1 1 0 1 1 1 0 Gas vesicle protein G UPF0160 PF03690.13 ORF106788 - 2.8e-20 73.2 0.0 3.6e-20 72.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0160) PKI PF02827.16 ORF106788 - 0.00059 20.0 1.3 0.00083 19.5 1.3 1.3 1 0 0 1 1 1 1 cAMP-dependent protein kinase inhibitor Rxt3 PF08642.10 ORF106788 - 0.019 15.7 0.5 0.025 15.3 0.5 1.2 1 0 0 1 1 1 0 Histone deacetylation protein Rxt3 NST1 PF13945.6 ORF10481 - 0.046 13.8 12.2 0.049 13.7 12.2 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator Protocadherin PF08374.11 ORF10481 - 0.081 12.9 7.4 0.095 12.7 7.4 1.1 1 0 0 1 1 1 0 Protocadherin Tom22 PF04281.13 ORF10481 - 0.17 11.7 7.2 0.17 11.7 6.6 1.3 1 1 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 DUF1387 PF07139.11 ORF10481 - 0.32 10.7 13.7 0.38 10.5 13.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1387) Tho2 PF11262.8 ORF10481 - 0.38 9.9 6.6 0.38 9.9 6.6 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 BSP_II PF05432.11 ORF10481 - 0.51 10.0 11.0 0.52 10.0 11.0 1.0 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) DUF3464 PF11947.8 ORF10481 - 4.4 7.0 8.2 5.5 6.7 8.2 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 MutS_V PF00488.21 ORF103580 - 9.2e-07 29.1 0.0 1.2e-06 28.7 0.0 1.1 1 0 0 1 1 1 1 MutS domain V CASP_C PF08172.12 ORF103580 - 0.0012 18.2 0.3 0.0012 18.2 0.3 1.1 1 0 0 1 1 1 1 CASP C terminal Rhabdo_M1 PF03342.13 ORF102896 - 0.051 12.9 0.2 0.056 12.8 0.2 1.2 1 0 0 1 1 1 0 Rhabdovirus M1 matrix protein (M1 polymerase-associated protein) DUF4337 PF14235.6 ORF101979 - 1.8 8.7 5.5 2.2 8.3 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) GP4 PF03010.14 ORF100809 - 0.095 12.6 0.3 0.12 12.3 0.3 1.2 1 0 0 1 1 1 0 GP4 Phage_term_smal PF05944.12 ORF100473 - 0.14 12.1 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Phage small terminase subunit Shisa PF13908.6 ORF100167 - 0.001 19.4 0.1 0.0011 19.2 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator WBP-1 PF11669.8 ORF100167 - 0.023 15.4 1.8 0.034 14.8 1.8 1.3 1 1 0 1 1 1 0 WW domain-binding protein 1 DUF4713 PF15831.5 ORF100167 - 0.25 11.8 9.6 0.35 11.3 8.7 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4713) TrkA_TMD PF18613.1 NODE_58143_length_289_cov_1.251969_g50204_i0reverse_frame_1 - 0.023 14.1 5.2 0.051 13.0 5.2 1.6 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain OST3_OST6 PF04756.13 NODE_58143_length_289_cov_1.251969_g50204_i0reverse_frame_1 - 0.066 12.5 0.0 0.075 12.4 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Aldedh PF00171.22 NODE_58139_length_289_cov_1.397638_g50200_i0forward_frame_1 - 3.6e-26 91.7 0.0 3.8e-26 91.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family WCCH PF03716.14 NODE_58134_length_289_cov_1.460630_g50195_i0forward_frame_1 - 0.6 9.8 6.3 0.52 10.0 0.8 2.6 2 0 0 2 2 2 0 WCCH motif CPP1-like PF11833.8 NODE_58130_length_289_cov_1.622047_g50191_i0reverse_frame_1 - 0.23 11.1 1.7 0.28 10.8 1.7 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like MAJIN PF15077.6 NODE_58125_length_289_cov_1.716535_g50186_i0reverse_frame_1 - 1.3 8.8 4.1 1.5 8.6 4.1 1.0 1 0 0 1 1 1 0 Membrane-anchored junction protein Membralin PF09746.9 NODE_58125_length_289_cov_1.716535_g50186_i0reverse_frame_1 - 3.8 6.5 5.5 4.4 6.3 5.5 1.0 1 0 0 1 1 1 0 Tumour-associated protein CPBP PF02517.16 NODE_58125_length_289_cov_1.716535_g50186_i0forward_frame_1 - 0.08 13.3 4.7 0.088 13.2 4.7 1.2 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease Mob1_phocein PF03637.17 NODE_58124_length_289_cov_1.732283_g50185_i0forward_frame_1 - 0.23 11.5 3.3 0.33 11.0 3.3 1.2 1 0 0 1 1 1 0 Mob1/phocein family DUF684 PF05075.14 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_1 - 0.027 13.4 0.2 0.033 13.2 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF684) MFS_1 PF07690.16 NODE_58113_length_289_cov_2.015748_g50174_i0reverse_frame_1 - 0.012 14.6 6.2 0.014 14.4 6.2 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily Vitellogenin_N PF01347.22 NODE_58107_length_289_cov_2.114173_g50168_i0reverse_frame_1 - 0.16 10.4 0.1 0.18 10.1 0.1 1.0 1 0 0 1 1 1 0 Lipoprotein amino terminal region Iwr1 PF08574.10 NODE_58105_length_289_cov_2.141732_g50166_i0forward_frame_1 - 0.13 13.3 8.8 0.17 12.9 8.8 1.2 1 0 0 1 1 1 0 Transcription factor Iwr1 DUF3146 PF11344.8 NODE_58104_length_289_cov_2.141732_g50165_i0reverse_frame_1 - 0.09 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3146) TAT_signal PF10518.9 NODE_58101_length_289_cov_2.188976_g50162_i0forward_frame_1 - 0.083 12.8 0.2 0.16 11.9 0.2 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence zinc_ribbon_10 PF10058.9 NODE_58101_length_289_cov_2.188976_g50162_i0forward_frame_1 - 0.084 12.6 1.9 2.1 8.1 0.2 2.3 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Ku_N PF03731.15 NODE_58097_length_289_cov_2.303150_g50158_i0reverse_frame_1 - 1.6e-12 47.7 0.2 1.7e-12 47.6 0.2 1.0 1 0 0 1 1 1 1 Ku70/Ku80 N-terminal alpha/beta domain DUF3342 PF11822.8 NODE_58092_length_289_cov_2.397638_g50153_i0forward_frame_1 - 0.039 14.2 0.1 0.043 14.0 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3342) Sugar_tr PF00083.24 NODE_58091_length_289_cov_2.452756_g50152_i0reverse_frame_1 - 6e-07 28.7 0.0 6.3e-07 28.6 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter S-antigen PF05756.11 NODE_58091_length_289_cov_2.452756_g50152_i0reverse_frame_1 - 0.0042 17.4 0.3 0.0051 17.1 0.3 1.2 1 0 0 1 1 1 1 S-antigen protein Peptidase_S74 PF13884.6 NODE_58091_length_289_cov_2.452756_g50152_i0reverse_frame_1 - 0.017 15.5 0.5 0.022 15.1 0.5 1.2 1 0 0 1 1 1 0 Chaperone of endosialidase DUF4974 PF16344.5 NODE_58091_length_289_cov_2.452756_g50152_i0reverse_frame_1 - 0.055 13.5 0.3 0.091 12.8 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4974) S_4TM PF18159.1 NODE_58091_length_289_cov_2.452756_g50152_i0reverse_frame_1 - 0.059 12.7 0.0 0.076 12.3 0.0 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Folate_carrier PF01770.18 NODE_58091_length_289_cov_2.452756_g50152_i0reverse_frame_1 - 0.09 11.5 0.0 0.098 11.4 0.0 1.0 1 0 0 1 1 1 0 Reduced folate carrier zf-C2H2_4 PF13894.6 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.0034 18.1 2.6 0.0089 16.8 2.5 1.8 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.0099 16.1 1.2 0.022 15.0 1.2 1.6 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.012 16.1 2.0 0.012 16.1 2.0 1.9 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-Di19 PF05605.12 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.027 14.8 2.6 0.14 12.4 2.7 2.0 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_6 PF13912.6 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.1 12.6 1.8 0.21 11.7 1.8 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger zf-RING_2 PF13639.6 NODE_58089_length_289_cov_2.464567_g50150_i0forward_frame_1 - 0.11 12.9 1.9 0.19 12.1 1.9 1.3 1 0 0 1 1 1 0 Ring finger domain His_Phos_2 PF00328.22 NODE_58085_length_289_cov_2.547244_g50146_i0forward_frame_1 - 0.0075 15.7 0.0 0.0077 15.6 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Phage_F PF02305.17 NODE_58081_length_289_cov_2.622047_g50142_i0reverse_frame_1 - 0.069 11.9 0.1 0.082 11.6 0.1 1.0 1 0 0 1 1 1 0 Capsid protein (F protein) Actin PF00022.19 NODE_58076_length_289_cov_2.877953_g50137_i0reverse_frame_1 - 8.7e-24 83.9 0.1 9.9e-24 83.7 0.1 1.0 1 0 0 1 1 1 1 Actin Bac_globin PF01152.21 NODE_58075_length_289_cov_2.889764_g50136_i0forward_frame_1 - 0.63 10.2 3.5 0.95 9.6 3.5 1.3 1 0 0 1 1 1 0 Bacterial-like globin LacY_symp PF01306.19 NODE_58073_length_289_cov_2.964567_g50134_i0reverse_frame_1 - 6.2e-49 166.9 2.6 6.7e-49 166.8 2.6 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter MFS_1_like PF12832.7 NODE_58073_length_289_cov_2.964567_g50134_i0reverse_frame_1 - 3.7e-05 22.8 2.4 4.4e-05 22.5 2.4 1.0 1 0 0 1 1 1 1 MFS_1 like family IL10 PF00726.17 NODE_58071_length_289_cov_2.980315_g50132_i0reverse_frame_1 - 0.048 13.2 0.0 0.051 13.1 0.0 1.1 1 0 0 1 1 1 0 Interleukin 10 Thioredoxin_8 PF13905.6 NODE_58070_length_289_cov_3.015748_g50131_i0forward_frame_1 - 0.0048 17.2 0.7 0.0064 16.8 0.7 1.4 1 1 0 1 1 1 1 Thioredoxin-like Phospholip_A2_3 PF09056.11 NODE_58068_length_289_cov_3.157480_g50129_i0reverse_frame_1 - 0.076 13.6 0.1 0.092 13.4 0.1 1.1 1 0 0 1 1 1 0 Prokaryotic phospholipase A2 DUF809 PF05663.11 NODE_58060_length_289_cov_11.074803_g50121_i0reverse_frame_1 - 0.13 12.4 1.8 0.16 12.1 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) OmpA PF00691.20 NODE_58060_length_289_cov_11.074803_g50121_i0forward_frame_1 - 0.097 13.1 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 OmpA family DUF4498 PF14926.6 NODE_58058_length_289_cov_22.452756_g50119_i0reverse_frame_1 - 0.16 11.2 0.1 0.21 10.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4498) UPAR_LY6 PF00021.21 NODE_58052_length_289_cov_41.964567_g50113_i0reverse_frame_1 - 0.026 15.2 1.5 0.032 14.9 1.5 1.2 1 0 0 1 1 1 0 u-PAR/Ly-6 domain HNH_4 PF13395.6 NODE_58044_length_289_cov_59.590551_g50105_i0reverse_frame_1 - 0.028 14.3 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 HNH endonuclease Arg_repressor PF01316.21 NODE_58044_length_289_cov_59.590551_g50105_i0forward_frame_1 - 0.11 12.3 0.3 0.19 11.5 0.3 1.3 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain WSK PF03832.13 NODE_58043_length_289_cov_59.972441_g50104_i0forward_frame_1 - 0.46 10.2 2.1 0.7 9.6 2.1 1.2 1 0 0 1 1 1 0 WSK motif Mqo PF06039.15 NODE_58042_length_289_cov_60.149606_g50103_i0forward_frame_1 - 0.069 11.7 0.0 0.08 11.5 0.0 1.0 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) CSRNP_N PF16019.5 NODE_58040_length_289_cov_63.216535_g50101_i0forward_frame_1 - 0.14 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus DZR PF12773.7 NODE_58036_length_289_cov_69.763780_g50097_i0forward_frame_1 - 0.027 14.5 1.1 0.027 14.5 1.1 1.4 2 0 0 2 2 2 0 Double zinc ribbon OSCP PF00213.18 NODE_58031_length_289_cov_75.814961_g50092_i0forward_frame_1 - 2.3e-07 31.1 0.3 2.6e-07 30.9 0.3 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit Glyco_hydro_10 PF00331.20 NODE_58031_length_289_cov_75.814961_g50092_i0forward_frame_1 - 0.044 12.9 0.0 0.052 12.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 10 DDT PF02791.17 NODE_58029_length_289_cov_76.582677_g50090_i0reverse_frame_1 - 0.17 12.2 4.6 0.28 11.5 4.6 1.4 1 0 0 1 1 1 0 DDT domain Ion_trans PF00520.31 NODE_58023_length_289_cov_87.047244_g50084_i0reverse_frame_1 - 0.0016 17.7 0.0 0.0018 17.5 0.0 1.0 1 0 0 1 1 1 1 Ion transport protein Ribosomal_S27e PF01667.17 NODE_58020_length_289_cov_90.881890_g50081_i0reverse_frame_1 - 0.0075 16.0 0.1 0.012 15.4 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S27 Ank_4 PF13637.6 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 2.1e-13 50.5 0.6 4.6e-09 36.6 0.2 1.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 8e-13 48.8 0.0 9.8e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 5.5e-11 42.4 0.1 0.00032 21.0 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 1.3e-08 34.4 0.0 0.00052 20.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_58020_length_289_cov_90.881890_g50081_i0forward_frame_1 - 1.3e-08 34.9 0.2 2e-07 31.2 0.1 2.1 1 1 1 2 2 2 1 Ankyrin repeats (many copies) PSII_Ycf12 PF05969.11 NODE_58011_length_289_cov_740.204724_g50072_i0reverse_frame_1 - 0.058 13.4 0.1 0.058 13.4 0.1 1.5 2 0 0 2 2 2 0 Photosystem II complex subunit Ycf12 YajC PF02699.15 NODE_58008_length_289_cov_1999.578740_g50069_i0reverse_frame_1 - 0.14 12.0 2.6 0.24 11.3 2.6 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit DUF3810 PF12725.7 NODE_58008_length_289_cov_1999.578740_g50069_i0forward_frame_1 - 5.9 6.1 6.6 7 5.9 6.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) CAF-1_p60_C PF15512.6 NODE_58004_length_290_cov_1.152941_g50065_i0reverse_frame_1 - 3.5 8.1 7.6 4 7.9 7.6 1.1 1 0 0 1 1 1 0 Chromatin assembly factor complex 1 subunit p60, C-terminal DUF3463 PF11946.8 NODE_57996_length_290_cov_1.396078_g50057_i0reverse_frame_1 - 0.018 14.8 0.5 0.025 14.4 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) Spectrin PF00435.21 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.0029 18.1 4.9 0.0062 17.0 4.9 1.6 1 1 0 1 1 1 1 Spectrin repeat Jnk-SapK_ap_N PF09744.9 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.012 15.8 10.1 0.016 15.5 10.1 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF3450 PF11932.8 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.025 13.9 10.2 0.031 13.6 6.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Cytochrom_B562 PF07361.11 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.091 13.4 5.9 0.2 12.3 5.9 1.5 1 1 0 1 1 1 0 Cytochrome b562 FAM76 PF16046.5 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.13 11.6 7.4 0.21 10.9 7.4 1.3 1 1 0 1 1 1 0 FAM76 protein Spc7 PF08317.11 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.16 10.8 10.7 0.18 10.7 10.7 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.24 10.9 5.5 0.26 10.8 5.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Fib_alpha PF08702.10 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.7 10.1 10.7 0.56 10.4 3.8 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Atg14 PF10186.9 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.79 8.7 8.6 0.9 8.6 8.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 bZIP_1 PF00170.21 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.85 9.8 12.6 1.5 8.9 0.1 3.1 3 0 0 3 3 3 0 bZIP transcription factor UPF0242 PF06785.11 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 0.92 9.6 11.6 1.3 9.1 11.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Cnn_1N PF07989.11 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 1.2 9.3 13.7 6.7 7.0 7.6 2.4 1 1 0 2 2 2 0 Centrosomin N-terminal motif 1 TSC22 PF01166.18 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 2.6 8.4 8.5 9.1 6.7 0.5 3.0 2 2 1 3 3 3 0 TSC-22/dip/bun family FliD_N PF02465.18 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_1 - 6.3 7.6 10.0 33 5.3 7.9 2.6 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Pkinase PF00069.25 NODE_57990_length_290_cov_1.513725_g50051_i0forward_frame_1 - 1.3e-07 31.2 0.2 1.4e-07 31.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57990_length_290_cov_1.513725_g50051_i0forward_frame_1 - 5.1e-05 22.7 0.1 5.6e-05 22.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase UPF0121 PF03661.13 NODE_57988_length_290_cov_1.631373_g50049_i0reverse_frame_1 - 0.88 8.9 8.1 1 8.7 8.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) Gelsolin PF00626.22 NODE_57987_length_290_cov_1.666667_g50048_i0reverse_frame_1 - 0.00025 20.9 0.4 0.00041 20.2 0.3 1.4 1 1 0 1 1 1 1 Gelsolin repeat Lsr2 PF11774.8 NODE_57987_length_290_cov_1.666667_g50048_i0reverse_frame_1 - 0.097 12.8 0.9 0.14 12.3 0.9 1.2 1 0 0 1 1 1 0 Lsr2 PIP5K PF01504.18 NODE_57985_length_290_cov_1.690196_g50046_i0reverse_frame_1 - 9e-24 84.1 3.0 9.7e-24 84.0 3.0 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Histone_HNS PF00816.21 NODE_57984_length_290_cov_1.721569_g50045_i0reverse_frame_1 - 0.17 12.7 0.2 0.28 12.1 0.2 1.3 1 0 0 1 1 1 0 H-NS histone family DUF2663 PF10864.8 NODE_57981_length_290_cov_1.756863_g50042_i0reverse_frame_1 - 4.5 7.7 7.5 2.1 8.8 2.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2663) zf-TRAF PF02176.18 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_1 - 1.2e-05 25.9 14.2 0.00094 19.8 5.8 2.7 1 1 1 2 2 2 2 TRAF-type zinc finger Sina PF03145.16 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_1 - 0.00028 20.9 5.1 0.00028 20.9 5.1 1.4 2 0 0 2 2 2 1 Seven in absentia protein family zf-TRAF_2 PF15965.5 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_1 - 0.03 14.8 5.6 0.044 14.2 5.6 1.4 1 1 0 1 1 1 0 TRAF-like zinc-finger TED PF08341.11 NODE_57976_length_290_cov_1.839216_g50037_i0reverse_frame_1 - 0.0041 17.5 0.1 0.0058 17.0 0.1 1.2 1 0 0 1 1 1 1 Thioester domain Anp1 PF03452.14 NODE_57976_length_290_cov_1.839216_g50037_i0reverse_frame_1 - 0.025 14.0 0.4 0.027 13.9 0.4 1.1 1 0 0 1 1 1 0 Anp1 SOTI PF17079.5 NODE_57970_length_290_cov_1.964706_g50031_i0reverse_frame_1 - 0.039 14.4 0.0 0.046 14.1 0.0 1.1 1 0 0 1 1 1 0 Male-specific protein scotti Rep_2 PF01719.17 NODE_57968_length_290_cov_1.988235_g50029_i0reverse_frame_1 - 0.11 12.3 2.4 0.15 11.8 2.4 1.4 1 1 0 1 1 1 0 Plasmid replication protein RT_RNaseH PF17917.1 NODE_57967_length_290_cov_2.003922_g50028_i0reverse_frame_1 - 9.9e-08 32.2 0.0 1.1e-07 32.1 0.0 1.0 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase Head-tail_con PF12236.8 NODE_57967_length_290_cov_2.003922_g50028_i0reverse_frame_1 - 0.11 10.9 0.0 0.12 10.7 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage head to tail connecting protein PIF3 PF05006.12 NODE_57964_length_290_cov_2.133333_g50025_i0reverse_frame_1 - 0.018 15.2 2.2 0.023 14.8 2.2 1.2 1 0 0 1 1 1 0 Per os infectivity factor 3 Nodulin_late PF07127.11 NODE_57964_length_290_cov_2.133333_g50025_i0reverse_frame_1 - 4.5 7.7 6.7 1.2 9.6 3.4 1.8 2 0 0 2 2 2 0 Late nodulin protein Epimerase PF01370.21 NODE_57960_length_290_cov_2.407843_g50021_i0forward_frame_1 - 8.7e-05 22.1 0.0 0.00024 20.7 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 NODE_57960_length_290_cov_2.407843_g50021_i0forward_frame_1 - 0.00044 19.5 0.0 0.00049 19.3 0.0 1.0 1 0 0 1 1 1 1 Male sterility protein Toxin_trans PF07952.12 NODE_57960_length_290_cov_2.407843_g50021_i0forward_frame_1 - 0.12 11.5 0.1 0.13 11.3 0.1 1.0 1 0 0 1 1 1 0 Clostridium neurotoxin, Translocation domain PAXNEB PF05625.11 NODE_57957_length_290_cov_2.568627_g50018_i0forward_frame_1 - 1.3 8.1 2.7 1.4 8.0 2.7 1.0 1 0 0 1 1 1 0 PAXNEB protein DUF4150 PF13665.6 NODE_57951_length_290_cov_2.807843_g50012_i0forward_frame_1 - 0.081 13.1 0.0 0.095 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4150) Ldl_recept_b PF00058.17 NODE_57939_length_290_cov_5.521569_g50000_i0reverse_frame_1 - 0.12 12.8 0.2 1.2 9.6 0.0 2.3 2 1 0 2 2 2 0 Low-density lipoprotein receptor repeat class B Trans_coact PF16805.5 NODE_57935_length_290_cov_19.721569_g49996_i0reverse_frame_1 - 0.018 15.1 2.7 2.9 8.1 0.3 2.1 2 0 0 2 2 2 0 Phage late-transcription coactivator Competence PF03772.16 NODE_57935_length_290_cov_19.721569_g49996_i0forward_frame_1 - 0.036 13.3 2.2 0.038 13.3 2.2 1.1 1 0 0 1 1 1 0 Competence protein DUF4218 PF13960.6 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_1 - 0.034 13.7 0.4 0.047 13.3 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4218) PH PF00169.29 NODE_57925_length_290_cov_48.796078_g49986_i0reverse_frame_1 - 0.019 15.5 0.6 0.027 15.0 0.6 1.4 1 1 0 1 1 1 0 PH domain DUF1944 PF09175.10 NODE_57919_length_290_cov_72.078431_g49980_i0forward_frame_1 - 0.025 14.4 0.1 0.027 14.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1944) PAC3 PF10178.9 NODE_57916_length_290_cov_75.835294_g49977_i0reverse_frame_1 - 3e-09 36.9 0.1 4.2e-09 36.4 0.1 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 3 Pkinase PF00069.25 NODE_57914_length_290_cov_77.819608_g49975_i0reverse_frame_1 - 2.6e-07 30.3 1.5 3.4e-07 29.9 1.5 1.1 1 0 0 1 1 1 1 Protein kinase domain Herpes_U47 PF05467.11 NODE_57914_length_290_cov_77.819608_g49975_i0forward_frame_1 - 0.089 10.9 1.2 0.097 10.8 1.2 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 YukD PF08817.10 NODE_57911_length_290_cov_81.450980_g49972_i0forward_frame_1 - 0.1 13.3 0.1 0.17 12.6 0.1 1.4 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD ubiquitin PF00240.23 NODE_57911_length_290_cov_81.450980_g49972_i0forward_frame_1 - 0.1 12.3 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin family PPR_3 PF13812.6 NODE_57910_length_290_cov_85.352941_g49971_i0reverse_frame_1 - 0.038 14.1 0.0 0.051 13.7 0.0 1.2 1 0 0 1 1 1 0 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_57910_length_290_cov_85.352941_g49971_i0reverse_frame_1 - 0.062 13.5 0.0 0.087 13.0 0.0 1.2 1 0 0 1 1 1 0 PPR repeat family p450 PF00067.22 NODE_57908_length_290_cov_101.219608_g49969_i0forward_frame_1 - 1.9e-11 43.4 0.0 2.1e-11 43.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Med9 PF07544.13 NODE_57906_length_290_cov_110.494118_g49967_i0reverse_frame_1 - 0.019 15.1 1.9 0.027 14.5 1.9 1.3 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 C_tripleX PF02363.19 NODE_57906_length_290_cov_110.494118_g49967_i0forward_frame_1 - 0.22 11.9 9.9 0.48 10.8 9.9 1.6 1 0 0 1 1 1 0 Cysteine rich repeat PBP1_TM PF14812.6 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_1 - 0.018 15.4 1.0 0.024 15.0 1.0 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF719 PF05334.13 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_1 - 0.019 15.2 2.0 0.022 15.0 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF719) DUF3408 PF11888.8 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_1 - 0.044 13.9 2.4 0.05 13.7 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) Slp PF03843.13 NODE_57903_length_290_cov_135.698039_g49964_i0reverse_frame_1 - 0.1 12.0 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Outer membrane lipoprotein Slp family Antimicrobial25 PF16839.5 NODE_57900_length_290_cov_194.988235_g49961_i0forward_frame_1 - 3.5 7.8 7.7 0.23 11.6 2.7 1.6 2 0 0 2 2 2 0 Nematode antimicrobial peptide Ribosomal_L31e PF01198.19 NODE_57893_length_290_cov_1381.423529_g49954_i0forward_frame_1 - 1.5e-13 50.8 0.5 2.5e-13 50.1 0.5 1.4 1 0 0 1 1 1 1 Ribosomal protein L31e DNA_pol3_delta2 PF13177.6 NODE_57878_length_291_cov_1.226562_g49939_i0reverse_frame_1 - 0.023 14.5 0.7 0.028 14.2 0.7 1.1 1 0 0 1 1 1 0 DNA polymerase III, delta subunit PyocinActivator PF11112.8 NODE_57876_length_291_cov_1.289062_g49937_i0reverse_frame_1 - 0.016 15.3 0.0 0.023 14.8 0.0 1.2 1 0 0 1 1 1 0 Pyocin activator protein PrtN MapZ_C2 PF18708.1 NODE_57865_length_291_cov_1.488281_g49926_i0forward_frame_1 - 0.065 13.5 0.0 0.08 13.2 0.0 1.1 1 0 0 1 1 1 0 MapZ extracellular C-terminal domain 2 PIRT PF15099.6 NODE_57863_length_291_cov_1.546875_g49924_i0reverse_frame_1 - 0.027 14.1 0.2 0.031 13.8 0.2 1.4 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family 7tm_1 PF00001.21 NODE_57863_length_291_cov_1.546875_g49924_i0reverse_frame_1 - 0.039 13.3 2.7 0.044 13.1 2.7 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) Comm PF15957.5 NODE_57863_length_291_cov_1.546875_g49924_i0forward_frame_1 - 0.047 14.0 2.9 0.063 13.6 2.9 1.2 1 0 0 1 1 1 0 Commissureless PA-IL PF07828.12 NODE_57859_length_291_cov_1.597656_g49920_i0reverse_frame_1 - 0.054 13.5 0.1 0.062 13.3 0.1 1.1 1 0 0 1 1 1 0 PA-IL-like protein DUF4215 PF13948.6 NODE_57859_length_291_cov_1.597656_g49920_i0forward_frame_1 - 4.9e-11 42.9 21.0 4.5e-08 33.4 8.7 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4215) Cytochrom_D1 PF02239.16 NODE_57859_length_291_cov_1.597656_g49920_i0forward_frame_1 - 0.26 9.7 0.0 0.3 9.6 0.0 1.1 1 0 0 1 1 1 0 Cytochrome D1 heme domain DUF4719 PF15843.5 NODE_57858_length_291_cov_1.632812_g49919_i0forward_frame_1 - 0.38 10.8 2.2 0.4 10.8 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) ECSCR PF15820.5 NODE_57857_length_291_cov_1.714844_g49918_i0reverse_frame_1 - 0.036 13.9 0.6 0.048 13.5 0.6 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF4051 PF13260.6 NODE_57857_length_291_cov_1.714844_g49918_i0reverse_frame_1 - 0.069 12.9 3.0 0.11 12.2 3.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) Ni_hydr_CYTB PF01292.20 NODE_57840_length_291_cov_2.050781_g49901_i0reverse_frame_1 - 0.029 14.0 0.4 0.041 13.5 0.4 1.2 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 Viral_cys_rich PF08008.12 NODE_57837_length_291_cov_2.144531_g49898_i0forward_frame_1 - 0.14 12.2 4.0 0.19 11.8 3.6 1.5 1 1 1 2 2 2 0 Viral cysteine rich MetOD1 PF18546.1 NODE_57836_length_291_cov_2.152344_g49897_i0forward_frame_1 - 0.013 15.4 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Metanogen output domain 1 Collagen_mid PF15984.5 NODE_57836_length_291_cov_2.152344_g49897_i0forward_frame_1 - 0.17 11.7 0.0 0.18 11.5 0.0 1.0 1 0 0 1 1 1 0 Bacterial collagen, middle region Pkinase PF00069.25 NODE_57835_length_291_cov_2.210938_g49896_i0reverse_frame_1 - 9.2e-16 58.0 0.1 1e-15 57.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57835_length_291_cov_2.210938_g49896_i0reverse_frame_1 - 4.4e-07 29.4 0.0 5e-07 29.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 NODE_57835_length_291_cov_2.210938_g49896_i0reverse_frame_1 - 0.0054 16.4 0.1 0.0055 16.3 0.1 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Amidohydro_1 PF01979.20 NODE_57828_length_291_cov_2.457031_g49889_i0forward_frame_1 - 0.02 14.2 0.0 0.02 14.2 0.0 1.0 1 0 0 1 1 1 0 Amidohydrolase family PUA_3 PF17785.1 NODE_57827_length_291_cov_2.531250_g49888_i0forward_frame_1 - 6.3e-05 22.7 0.0 9.1e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 PUA-like domain ATP-synt_8 PF00895.20 NODE_57819_length_291_cov_3.117188_g49880_i0forward_frame_1 - 0.056 13.9 1.1 0.082 13.4 1.1 1.2 1 0 0 1 1 1 0 ATP synthase protein 8 CRISPR_Cse1 PF09481.10 NODE_57818_length_291_cov_3.121094_g49879_i0forward_frame_1 - 0.024 13.7 0.1 0.027 13.6 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein Cse1 (CRISPR_cse1) Melittin PF01372.17 NODE_57816_length_291_cov_3.855469_g49877_i0reverse_frame_1 - 0.044 13.7 0.0 0.13 12.2 0.0 1.8 1 0 0 1 1 1 0 Melittin CENP-I PF07778.11 NODE_57808_length_291_cov_20.757812_g49869_i0forward_frame_1 - 5 5.7 9.1 7.8 5.1 9.1 1.3 1 1 0 1 1 1 0 Mis6 SHIPPO-rpt PF07004.12 NODE_57807_length_291_cov_28.718750_g49868_i0forward_frame_1 - 0.11 13.4 0.4 0.94 10.5 0.0 2.3 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat JIP_LZII PF16471.5 NODE_57801_length_291_cov_52.664062_g49862_i0reverse_frame_1 - 0.17 12.1 3.5 0.3 11.3 1.3 2.0 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II NCE101 PF11654.8 NODE_57797_length_291_cov_58.230469_g49858_i0forward_frame_1 - 1.2 8.9 5.5 7.3 6.4 0.3 2.4 2 0 0 2 2 2 0 Non-classical export protein 1 DUF4658 PF15555.6 NODE_57797_length_291_cov_58.230469_g49858_i0forward_frame_1 - 1.6 8.8 16.1 2.3 8.3 1.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4658) Ribosomal_L34 PF00468.17 NODE_57790_length_291_cov_67.949219_g49851_i0reverse_frame_1 - 0.02 14.8 3.0 0.02 14.8 3.0 2.3 2 0 0 2 2 2 0 Ribosomal protein L34 Kinase-like PF14531.6 NODE_57786_length_291_cov_74.746094_g49847_i0reverse_frame_1 - 0.018 14.4 0.2 0.018 14.3 0.2 1.1 1 0 0 1 1 1 0 Kinase-like DEFB136 PF17333.2 NODE_57785_length_291_cov_75.062500_g49846_i0reverse_frame_1 - 0.73 9.8 12.1 0.33 11.0 9.5 1.8 1 1 1 2 2 2 0 Beta defensin 136 Methyltransf_24 PF13578.6 NODE_57780_length_291_cov_92.550781_g49841_i0reverse_frame_1 - 5e-05 24.3 0.1 7.7e-05 23.7 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain OapA_N PF08525.11 NODE_57780_length_291_cov_92.550781_g49841_i0forward_frame_1 - 0.09 12.7 0.5 0.15 12.0 0.5 1.4 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif RHH_1 PF01402.21 NODE_57778_length_291_cov_99.527344_g49839_i0forward_frame_1 - 0.068 13.1 0.8 0.25 11.4 0.5 1.8 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family Thoc2 PF11732.8 NODE_57775_length_291_cov_117.335938_g49836_i0forward_frame_1 - 0.12 12.4 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 Transcription- and export-related complex subunit Toxin_7 PF05980.12 NODE_57773_length_291_cov_124.121094_g49834_i0forward_frame_1 - 0.058 13.6 5.8 0.48 10.7 2.3 2.4 2 0 0 2 2 2 0 Toxin 7 zf-RING_12 PF17976.1 NODE_57773_length_291_cov_124.121094_g49834_i0forward_frame_1 - 0.13 12.6 4.0 0.45 10.8 2.2 2.0 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain Histone_H2A_C PF16211.5 NODE_57773_length_291_cov_124.121094_g49834_i0forward_frame_1 - 0.16 11.7 0.9 0.3 10.9 0.9 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A EF-hand_1 PF00036.32 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 1.8e-17 61.5 1.2 5.3e-08 31.9 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 4.8e-15 55.8 0.8 5.8e-15 55.5 0.8 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 2e-14 52.3 0.4 2.3e-06 26.8 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 1.5e-13 49.5 0.6 2.2e-07 30.2 0.0 2.3 2 1 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 4.9e-13 48.7 2.3 6.1e-08 32.4 0.2 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.0005 20.3 0.1 0.0008 19.7 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.0011 19.3 0.3 0.0013 19.0 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.0045 17.8 0.0 0.0056 17.5 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.019 14.9 0.2 0.046 13.7 0.2 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.048 13.9 0.0 0.056 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.13 10.8 0.0 0.15 10.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 NODE_57758_length_291_cov_42308.457031_g49819_i0forward_frame_1 - 0.15 11.9 0.4 0.81 9.6 0.3 2.1 2 0 0 2 2 2 0 EF hand NiFe_hyd_SSU_C PF14720.6 NODE_57750_length_292_cov_1.194553_g49811_i0forward_frame_3 - 0.091 13.1 1.1 3.1 8.2 0.0 2.1 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal zinc_ribbon_15 PF17032.5 NODE_57744_length_292_cov_1.400778_g49805_i0reverse_frame_3 - 0.0033 18.1 3.0 0.0045 17.7 3.0 1.2 1 0 0 1 1 1 1 zinc-ribbon family KIAA1430 PF13879.6 NODE_57741_length_292_cov_1.490272_g49802_i0reverse_frame_3 - 0.099 13.4 0.5 0.11 13.2 0.5 1.3 1 1 0 1 1 1 0 KIAA1430 homologue PBSX_XtrA PF17356.2 NODE_57739_length_292_cov_1.525292_g49800_i0forward_frame_2 - 0.12 12.3 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Phage-like element PBSX protein XtrA Lig_chan PF00060.26 NODE_57728_length_292_cov_1.929961_g49789_i0forward_frame_3 - 0.25 11.1 2.0 0.29 11.0 0.7 1.6 1 1 1 2 2 2 0 Ligand-gated ion channel GARS_A PF01071.19 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 1.2e-23 83.9 0.0 1.4e-23 83.7 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.00015 22.5 0.0 0.00028 21.6 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain ATP-grasp PF02222.22 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.0017 18.0 0.0 0.0021 17.7 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.0023 17.5 0.0 0.0027 17.2 0.0 1.1 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain tRNA_synt_1c_R1 PF04558.15 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.059 13.4 0.0 0.062 13.3 0.0 1.1 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 RimK PF08443.11 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.063 12.9 0.0 0.083 12.5 0.0 1.1 1 0 0 1 1 1 0 RimK-like ATP-grasp domain ATP-grasp_2 PF08442.10 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.077 12.6 0.0 0.097 12.2 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain ATPgrasp_ST PF14397.6 NODE_57724_length_292_cov_2.038911_g49785_i0reverse_frame_2 - 0.16 11.2 0.0 0.18 11.0 0.0 1.0 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Exo_endo_phos_2 PF14529.6 NODE_57721_length_292_cov_2.143969_g49782_i0forward_frame_3 - 0.013 15.4 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Peptidase_M16 PF00675.20 NODE_57720_length_292_cov_2.171206_g49781_i0forward_frame_3 - 0.0011 18.9 0.3 0.0027 17.7 0.0 1.7 1 1 1 2 2 2 1 Insulinase (Peptidase family M16) Ric8 PF10165.9 NODE_57718_length_292_cov_2.431907_g49779_i0reverse_frame_2 - 0.13 11.3 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Guanine nucleotide exchange factor synembryn SfsA PF03749.13 NODE_57717_length_292_cov_2.544747_g49778_i0forward_frame_2 - 0.088 12.7 0.2 2.5 8.0 0.1 2.0 1 1 1 2 2 2 0 Sugar fermentation stimulation protein RE domain CD45 PF12567.8 NODE_57714_length_292_cov_2.649805_g49775_i0reverse_frame_2 - 0.12 12.3 0.7 14 5.8 0.0 2.4 2 0 0 2 2 2 0 Leukocyte receptor CD45 AAA_lid_2 PF17863.1 NODE_57705_length_292_cov_3.210117_g49766_i0reverse_frame_2 - 0.067 13.0 1.7 0.084 12.7 0.6 1.7 1 1 1 2 2 2 0 AAA lid domain AMP-binding_C PF13193.6 NODE_57703_length_292_cov_3.408560_g49764_i0reverse_frame_3 - 5.5e-08 33.7 1.0 1.3e-07 32.4 0.5 1.7 1 1 1 2 2 2 1 AMP-binding enzyme C-terminal domain DUF3537 PF12056.8 NODE_57698_length_292_cov_3.961089_g49759_i0reverse_frame_3 - 0.041 12.7 1.5 0.036 12.9 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3537) SOCS_box PF07525.16 NODE_57696_length_292_cov_4.731518_g49757_i0forward_frame_2 - 0.016 15.6 0.6 0.035 14.5 0.6 1.5 1 0 0 1 1 1 0 SOCS box Lamprin PF06403.11 NODE_57695_length_292_cov_5.295720_g49756_i0forward_frame_2 - 3.7 7.5 12.8 2.3 8.2 1.5 2.0 1 1 1 2 2 2 0 Lamprin EphA2_TM PF14575.6 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_3 - 0.022 15.6 0.6 0.029 15.2 0.2 1.5 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain ODV-E18 PF10717.9 NODE_57694_length_292_cov_6.665370_g49755_i0forward_frame_3 - 1.9 8.4 10.8 0.48 10.3 6.4 1.9 1 1 1 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 DUF5355 PF17306.2 NODE_57692_length_292_cov_18.961089_g49753_i0forward_frame_3 - 0.04 13.0 1.6 0.044 12.8 1.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5355) Abhydrolase_3 PF07859.13 NODE_57690_length_292_cov_31.377432_g49751_i0forward_frame_2 - 0.0042 17.0 0.0 0.0078 16.1 0.0 1.4 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_57690_length_292_cov_31.377432_g49751_i0forward_frame_2 - 0.1 11.9 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF5553 PF17707.1 NODE_57688_length_292_cov_41.964981_g49749_i0reverse_frame_3 - 0.049 13.1 1.1 0.056 12.9 1.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5553) FAM199X PF15814.5 NODE_57688_length_292_cov_41.964981_g49749_i0forward_frame_3 - 0.00024 20.3 2.3 0.00028 20.1 2.3 1.0 1 0 0 1 1 1 1 Protein family FAM199X SR-25 PF10500.9 NODE_57688_length_292_cov_41.964981_g49749_i0forward_frame_3 - 0.15 11.7 7.5 0.14 11.7 7.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Spt5_N PF11942.8 NODE_57683_length_292_cov_50.533074_g49744_i0reverse_frame_3 - 0.3 12.1 7.2 0.39 11.7 7.2 1.1 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal PMSI1 PF15322.6 NODE_57683_length_292_cov_50.533074_g49744_i0reverse_frame_3 - 4.3 6.7 7.7 4.9 6.5 7.7 1.0 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative TSGP1 PF07771.11 NODE_57681_length_292_cov_52.817121_g49742_i0reverse_frame_3 - 0.12 12.5 1.0 0.16 12.1 1.0 1.2 1 0 0 1 1 1 0 Tick salivary peptide group 1 DUF3937 PF13073.6 NODE_57680_length_292_cov_52.902724_g49741_i0forward_frame_3 - 0.15 12.2 1.2 0.24 11.5 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3937) Deltameth_res PF16020.5 NODE_57680_length_292_cov_52.902724_g49741_i0forward_frame_2 - 0.032 14.1 0.8 0.05 13.5 0.8 1.3 1 0 0 1 1 1 0 Deltamethrin resistance # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks274.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks274.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks274.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks274.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- YqzE PF14038.6 NODE_57679_length_292_cov_55.202335_g49740_i0reverse_frame_2 - 4.4 7.4 7.6 1 9.5 0.7 2.2 2 0 0 2 2 2 0 YqzE-like protein Amb_V_allergen PF03913.13 NODE_57678_length_292_cov_56.000000_g49739_i0forward_frame_2 - 0.026 14.4 2.2 0.044 13.7 2.2 1.3 1 0 0 1 1 1 0 Amb V Allergen X8 PF07983.13 NODE_57675_length_292_cov_60.210117_g49736_i0forward_frame_2 - 0.047 14.4 0.3 0.067 13.9 0.3 1.3 1 0 0 1 1 1 0 X8 domain Flexi_CP PF00286.20 NODE_57674_length_292_cov_64.692607_g49735_i0forward_frame_2 - 0.04 13.8 0.9 0.048 13.6 0.9 1.1 1 0 0 1 1 1 0 Viral coat protein Fimbrial_K88 PF02432.15 NODE_57671_length_292_cov_65.723735_g49732_i0forward_frame_2 - 0.058 13.4 0.0 0.07 13.1 0.0 1.1 1 0 0 1 1 1 0 Fimbrial, major and minor subunit ICAP-1_inte_bdg PF10480.9 NODE_57671_length_292_cov_65.723735_g49732_i0forward_frame_2 - 0.57 10.1 2.7 0.63 10.0 2.7 1.1 1 0 0 1 1 1 0 Beta-1 integrin binding protein YqgC PF17430.2 NODE_57668_length_292_cov_73.770428_g49729_i0reverse_frame_3 - 0.049 13.7 0.3 0.1 12.7 0.3 1.6 1 0 0 1 1 1 0 Uncharacterized YqgC-like EP400_N PF15790.5 NODE_57665_length_292_cov_76.591440_g49726_i0reverse_frame_2 - 0.23 10.2 0.0 0.31 9.8 0.0 1.1 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal Herpes_env PF01673.18 NODE_57662_length_292_cov_78.385214_g49723_i0forward_frame_2 - 0.038 12.9 1.0 0.04 12.8 1.0 1.1 1 0 0 1 1 1 0 Herpesvirus putative major envelope glycoprotein Lysis_col PF02402.16 NODE_57661_length_292_cov_78.731518_g49722_i0reverse_frame_3 - 3.3 7.5 5.9 7.9 6.2 5.9 1.6 1 0 0 1 1 1 0 Lysis protein Zn-ribbon_8 PF09723.10 NODE_57660_length_292_cov_80.486381_g49721_i0reverse_frame_3 - 0.0022 18.1 4.5 0.079 13.1 0.7 2.4 2 0 0 2 2 2 2 Zinc ribbon domain zf-C2H2 PF00096.26 NODE_57660_length_292_cov_80.486381_g49721_i0reverse_frame_3 - 0.023 15.1 14.3 0.064 13.7 2.3 3.5 3 0 0 3 3 3 0 Zinc finger, C2H2 type C1_2 PF03107.16 NODE_57660_length_292_cov_80.486381_g49721_i0reverse_frame_3 - 3.5 8.0 12.9 0.62 10.4 7.3 2.3 1 1 1 2 2 2 0 C1 domain EspG PF06872.11 NODE_57660_length_292_cov_80.486381_g49721_i0forward_frame_3 - 0.077 11.5 1.0 0.082 11.5 1.0 1.0 1 0 0 1 1 1 0 EspG protein MIIP PF15734.5 NODE_57659_length_292_cov_84.568093_g49720_i0forward_frame_3 - 0.074 12.5 0.5 0.091 12.2 0.5 1.0 1 0 0 1 1 1 0 Migration and invasion-inhibitory CDV3 PF15359.6 NODE_57657_length_292_cov_94.766537_g49718_i0reverse_frame_2 - 0.098 13.1 3.0 0.12 12.9 3.0 1.1 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 HRG PF16954.5 NODE_57656_length_292_cov_97.042802_g49717_i0reverse_frame_3 - 0.091 13.2 1.1 0.091 13.2 1.1 2.0 1 1 1 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene KSHV_K8 PF07188.11 NODE_57655_length_292_cov_99.303502_g49716_i0forward_frame_3 - 0.06 12.7 0.1 0.066 12.6 0.1 1.0 1 0 0 1 1 1 0 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein WND PF07861.11 NODE_57654_length_292_cov_99.704280_g49715_i0forward_frame_2 - 0.025 14.0 0.0 0.032 13.7 0.0 1.2 1 0 0 1 1 1 0 WisP family N-Terminal Region His_Phos_1 PF00300.22 NODE_57653_length_292_cov_111.529183_g49714_i0forward_frame_2 - 0.0066 16.2 0.0 0.0073 16.0 0.0 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Tim29 PF10171.9 NODE_57653_length_292_cov_111.529183_g49714_i0forward_frame_2 - 0.045 13.3 0.0 0.055 13.0 0.0 1.1 1 0 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 DUF3908 PF13048.6 NODE_57651_length_292_cov_122.700389_g49712_i0reverse_frame_3 - 0.11 12.7 0.1 0.14 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3908) CBM_19 PF03427.13 NODE_57649_length_292_cov_127.949416_g49710_i0forward_frame_3 - 0.43 10.6 4.6 1.2 9.1 4.7 1.7 2 0 0 2 2 2 0 Carbohydrate binding domain (family 19) TraD_N PF12615.8 NODE_57648_length_292_cov_130.299611_g49709_i0reverse_frame_2 - 0.014 16.1 0.3 0.02 15.6 0.3 1.3 1 0 0 1 1 1 0 F sex factor protein N terminal Spore_YpjB PF09577.10 NODE_57647_length_292_cov_142.287938_g49708_i0reverse_frame_2 - 0.028 14.2 0.1 0.031 14.1 0.1 1.2 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) Lipase_chap PF03280.14 NODE_57645_length_292_cov_149.350195_g49706_i0reverse_frame_2 - 0.002 18.1 2.1 0.0021 18.0 2.1 1.1 1 0 0 1 1 1 1 Proteobacterial lipase chaperone protein LegC3_N PF18654.1 NODE_57645_length_292_cov_149.350195_g49706_i0reverse_frame_2 - 0.017 14.4 2.9 0.021 14.1 2.9 1.0 1 0 0 1 1 1 0 LegC3 N-terminal coiled-coil domain DUF4972 PF16342.5 NODE_57644_length_292_cov_156.914397_g49705_i0reverse_frame_2 - 0.081 12.6 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) Vps53_N PF04100.12 NODE_57644_length_292_cov_156.914397_g49705_i0forward_frame_2 - 1.6e-06 27.3 0.1 2.2e-06 26.9 0.1 1.2 1 0 0 1 1 1 1 Vps53-like, N-terminal DUF4855 PF16147.5 NODE_57644_length_292_cov_156.914397_g49705_i0forward_frame_2 - 0.048 12.7 0.1 0.053 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4855) Importin_rep_2 PF18786.1 NODE_57644_length_292_cov_156.914397_g49705_i0forward_frame_2 - 0.15 12.0 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Importin 13 repeat IF-2B PF01008.17 NODE_57642_length_292_cov_177.466926_g49703_i0forward_frame_3 - 0.062 12.5 0.1 0.074 12.3 0.1 1.0 1 0 0 1 1 1 0 Initiation factor 2 subunit family ATP-synt_Eps PF04627.13 NODE_57640_length_292_cov_293.813230_g49701_i0forward_frame_2 - 0.0098 15.9 0.9 0.012 15.6 0.0 1.6 2 0 0 2 2 2 1 Mitochondrial ATP synthase epsilon chain Melittin PF01372.17 NODE_57635_length_292_cov_1709.657588_g49696_i0reverse_frame_2 - 3.1 7.9 5.1 11 6.2 0.5 2.5 2 0 0 2 2 2 0 Melittin DUF3488 PF11992.8 NODE_57635_length_292_cov_1709.657588_g49696_i0forward_frame_2 - 0.15 11.0 1.0 0.16 10.9 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF735 PF05246.11 NODE_57633_length_293_cov_0.992248_g49694_i0forward_frame_2 - 0.057 13.4 1.4 0.061 13.3 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF735) ShK PF01549.24 NODE_57632_length_293_cov_1.007752_g49693_i0reverse_frame_2 - 0.0081 16.7 7.0 0.014 15.9 0.8 2.5 1 1 1 2 2 2 2 ShK domain-like ZF-HD_dimer PF04770.12 NODE_57632_length_293_cov_1.007752_g49693_i0reverse_frame_2 - 0.54 10.6 6.0 0.25 11.7 0.8 2.0 2 0 0 2 2 2 0 ZF-HD protein dimerisation region Phage_holin_4_2 PF04020.13 NODE_57631_length_293_cov_1.085271_g49692_i0reverse_frame_3 - 0.73 10.5 6.9 0.35 11.6 5.1 1.6 1 1 1 2 2 2 0 Mycobacterial 4 TMS phage holin, superfamily IV CENP-T_C PF15511.6 NODE_57622_length_293_cov_1.608527_g49683_i0reverse_frame_2 - 0.001 19.1 0.0 0.0012 18.9 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold Histone PF00125.24 NODE_57622_length_293_cov_1.608527_g49683_i0reverse_frame_2 - 0.011 16.1 0.0 0.013 15.9 0.0 1.1 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 CdiI_N PF18228.1 NODE_57621_length_293_cov_1.620155_g49682_i0reverse_frame_3 - 0.071 12.9 1.0 0.088 12.7 1.0 1.3 1 0 0 1 1 1 0 CdiI N-terminal domain DUF5461 PF17545.2 NODE_57619_length_293_cov_1.693798_g49680_i0reverse_frame_3 - 0.0095 16.2 0.1 0.012 15.9 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5461) Syndecan PF01034.20 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.00037 20.4 0.7 0.00058 19.7 0.7 1.3 1 0 0 1 1 1 1 Syndecan domain DUF5305 PF17231.2 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.013 14.9 0.2 0.015 14.7 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) zf_UBZ PF18439.1 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.015 14.9 1.4 0.88 9.2 0.1 2.4 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger DUF2367 PF10164.9 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.026 15.0 0.7 0.032 14.7 0.7 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) ATP-synt_S1 PF05827.12 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.068 13.0 0.1 0.082 12.7 0.1 1.2 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) Baculo_11_kDa PF06143.11 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.079 12.5 4.3 0.11 12.1 4.3 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family Zn_Tnp_IS1595 PF12760.7 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.17 11.9 2.3 0.3 11.1 2.3 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-C2HC5 PF06221.13 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 0.54 10.3 4.6 6.8 6.8 4.6 2.2 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type TMEM169 PF15052.6 NODE_57619_length_293_cov_1.693798_g49680_i0forward_frame_2 - 2.4 8.3 9.1 0.75 9.9 0.2 2.1 1 1 1 2 2 2 0 TMEM169 protein family YrhK PF14145.6 NODE_57618_length_293_cov_1.705426_g49679_i0forward_frame_2 - 0.082 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 YrhK-like protein TSC22 PF01166.18 NODE_57615_length_293_cov_1.837209_g49676_i0reverse_frame_3 - 0.15 12.4 5.3 3.2 8.1 0.2 2.2 1 1 1 2 2 2 0 TSC-22/dip/bun family ZapB PF06005.12 NODE_57615_length_293_cov_1.837209_g49676_i0reverse_frame_3 - 0.2 12.1 6.2 0.28 11.6 6.2 1.2 1 0 0 1 1 1 0 Cell division protein ZapB Cep57_CLD_2 PF14197.6 NODE_57615_length_293_cov_1.837209_g49676_i0reverse_frame_3 - 0.23 11.6 4.2 0.98 9.6 4.3 1.8 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 PCSK9_C2 PF18464.1 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_3 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain AAA PF00004.29 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 6.3e-24 84.9 0.0 7.4e-24 84.7 0.0 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 1.5e-05 24.8 0.0 2.7e-05 24.0 0.0 1.4 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 1.8e-05 25.0 0.2 0.0041 17.4 0.0 2.1 1 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 3.6e-05 24.2 0.2 0.0037 17.7 0.1 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 4.9e-05 23.3 0.1 0.00023 21.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Bac_DnaA PF00308.18 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.00017 21.5 0.0 0.00021 21.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial dnaA protein IstB_IS21 PF01695.17 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.00027 20.7 0.0 0.0003 20.6 0.0 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein ATPase PF06745.13 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.00074 18.9 0.3 0.36 10.1 0.0 2.0 1 1 1 2 2 2 2 KaiC Sigma54_activat PF00158.26 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0019 17.9 0.1 0.17 11.5 0.0 2.1 1 1 0 2 2 2 1 Sigma-54 interaction domain AAA_18 PF13238.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0042 17.6 0.1 0.005 17.4 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0053 16.5 0.1 0.0099 15.6 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.14 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0058 16.8 0.0 0.05 13.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) TsaE PF02367.17 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0063 16.5 0.1 0.0097 15.9 0.1 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_14 PF13173.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0079 16.2 0.0 0.0098 15.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0087 15.3 0.1 0.013 14.7 0.1 1.4 1 1 0 1 1 1 1 TIP49 P-loop domain AAA_7 PF12775.7 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.0098 15.4 0.1 0.052 13.1 0.1 1.9 1 1 0 1 1 1 1 P-loop containing dynein motor region NACHT PF05729.12 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.013 15.4 0.1 0.03 14.3 0.0 1.5 1 1 1 2 2 2 0 NACHT domain Mg_chelatase PF01078.21 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.013 14.9 0.3 0.042 13.2 0.2 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.033 14.3 0.0 0.038 14.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.045 14.2 0.0 0.048 14.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.053 13.9 0.0 0.11 12.9 0.0 1.5 1 1 1 2 2 2 0 RNA helicase NTPase_1 PF03266.15 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.062 13.2 0.1 3 7.7 0.0 2.0 1 1 1 2 2 2 0 NTPase ABC_tran PF00005.27 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.1 13.1 0.1 0.16 12.5 0.1 1.3 1 0 0 1 1 1 0 ABC transporter PduV-EutP PF10662.9 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_25 PF13481.6 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.16 11.5 0.1 0.24 10.9 0.1 1.4 1 1 0 1 1 1 0 AAA domain PhoH PF02562.16 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.18 11.2 0.6 1.3 8.4 0.2 1.9 2 0 0 2 2 2 0 PhoH-like protein AAA_3 PF07726.11 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.19 11.6 0.0 0.22 11.4 0.0 1.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 NODE_57613_length_293_cov_1.856589_g49674_i0forward_frame_2 - 0.21 11.0 0.1 11 5.4 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein DUF4199 PF13858.6 NODE_57612_length_293_cov_1.899225_g49673_i0forward_frame_3 - 0.051 14.0 0.3 0.051 14.0 0.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) Peptidase_M48_N PF16491.5 NODE_57610_length_293_cov_1.922481_g49671_i0reverse_frame_3 - 0.023 14.6 0.6 0.028 14.3 0.6 1.2 1 0 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices TMEM82 PF15816.5 NODE_57610_length_293_cov_1.922481_g49671_i0reverse_frame_3 - 0.059 12.3 9.3 0.064 12.2 9.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 82 zf-LITAF-like PF10601.9 NODE_57610_length_293_cov_1.922481_g49671_i0reverse_frame_3 - 1.1 9.6 9.6 0.066 13.5 1.8 2.0 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain zf-B_box PF00643.24 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 3e-07 30.5 10.1 3e-07 30.5 10.1 3.0 1 1 1 2 2 2 1 B-box zinc finger zf_UBZ PF18439.1 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 0.021 14.4 0.4 0.021 14.4 0.4 4.8 2 2 3 5 5 5 0 Ubiquitin-Binding Zinc Finger CEBP_ZZ PF16366.5 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 0.023 14.9 22.9 0.043 14.0 17.2 2.7 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-C4_ClpX PF06689.13 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 0.043 13.7 0.4 0.043 13.7 0.4 3.5 3 2 0 3 3 3 0 ClpX C4-type zinc finger DUF2197 PF09963.9 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 0.14 12.5 23.1 0.16 12.3 3.2 4.1 1 1 3 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2197) zinc-ribbons_6 PF07191.12 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 0.44 10.6 21.9 0.2 11.7 16.4 2.5 1 1 1 2 2 2 0 zinc-ribbons Rhodanese_C PF12368.8 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 5.1 7.5 21.5 4.4 7.7 4.1 3.1 1 1 2 3 3 3 0 Rhodanase C-terminal PHD PF00628.29 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 8.3 6.4 33.3 4.1 7.4 0.5 4.2 1 1 2 3 3 3 0 PHD-finger Rpr2 PF04032.16 NODE_57610_length_293_cov_1.922481_g49671_i0forward_frame_2 - 9 6.7 18.1 7.9 6.8 1.5 2.5 2 1 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain ABC_tran PF00005.27 NODE_57608_length_293_cov_1.937984_g49669_i0reverse_frame_2 - 2.9e-07 31.1 0.0 3.1e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 ABC transporter DUF1068 PF06364.12 NODE_57607_length_293_cov_2.050388_g49668_i0reverse_frame_2 - 0.41 10.5 6.8 0.43 10.4 6.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) zf-CCCH PF00642.24 NODE_57604_length_293_cov_2.116279_g49665_i0reverse_frame_2 - 0.11 12.4 1.3 0.27 11.2 0.4 2.2 1 1 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) SR-25 PF10500.9 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_3 - 1.5 8.4 12.1 1.5 8.4 12.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein SP_C-Propep PF08999.10 NODE_57602_length_293_cov_2.127907_g49663_i0reverse_frame_2 - 0.081 12.7 2.0 0.11 12.3 2.0 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide SAM35 PF10806.8 NODE_57601_length_293_cov_2.151163_g49662_i0reverse_frame_3 - 0.091 13.0 0.4 0.13 12.6 0.2 1.4 1 1 0 1 1 1 0 SAM35, subunit of SAM coomplex Toxin_22 PF08092.11 NODE_57597_length_293_cov_2.189922_g49658_i0forward_frame_3 - 0.37 10.9 4.3 0.88 9.7 4.3 1.7 1 1 0 1 1 1 0 Magi peptide toxin family DUF1180 PF06679.12 NODE_57594_length_293_cov_2.321705_g49655_i0reverse_frame_2 - 0.13 12.7 3.0 0.14 12.6 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) IQ PF00612.27 NODE_57592_length_293_cov_2.387597_g49653_i0reverse_frame_2 - 0.00053 19.6 1.0 0.00093 18.8 1.0 1.4 1 0 0 1 1 1 1 IQ calmodulin-binding motif Pkinase PF00069.25 NODE_57591_length_293_cov_2.403101_g49652_i0reverse_frame_2 - 3.4e-28 98.7 0.0 3.8e-28 98.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_57591_length_293_cov_2.403101_g49652_i0reverse_frame_2 - 1.3e-11 44.2 0.0 1.5e-11 44.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_57591_length_293_cov_2.403101_g49652_i0reverse_frame_2 - 4.8e-05 22.8 0.0 5.5e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Leu_leader PF08054.11 NODE_57588_length_293_cov_2.476744_g49649_i0forward_frame_3 - 0.36 10.5 0.2 0.36 10.5 0.2 1.9 3 0 0 3 3 3 0 Leucine operon leader peptide DUF1774 PF08611.10 NODE_57588_length_293_cov_2.476744_g49649_i0forward_frame_3 - 3 8.2 6.9 3.9 7.9 6.9 1.1 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1774) PapD_C PF02753.17 NODE_57587_length_293_cov_2.480620_g49648_i0forward_frame_2 - 2.6e-11 43.7 0.5 4.2e-11 43.0 0.5 1.3 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain TetR_C_17 PF17922.1 NODE_57585_length_293_cov_2.538760_g49646_i0reverse_frame_3 - 0.013 15.6 0.1 0.016 15.3 0.1 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Peptidase_M48_N PF16491.5 NODE_57585_length_293_cov_2.538760_g49646_i0forward_frame_2 - 0.02 14.8 3.8 0.026 14.4 3.8 1.2 1 0 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices Integrin_B_tail PF07965.12 NODE_57584_length_293_cov_2.589147_g49645_i0reverse_frame_3 - 0.053 14.0 0.0 0.079 13.5 0.0 1.3 1 0 0 1 1 1 0 Integrin beta tail domain RVT_1 PF00078.27 NODE_57580_length_293_cov_2.674419_g49641_i0reverse_frame_2 - 3.2e-09 36.6 0.0 3.6e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) PmrD PF11183.8 NODE_57579_length_293_cov_2.728682_g49640_i0reverse_frame_3 - 0.021 14.9 0.0 0.027 14.6 0.0 1.2 1 0 0 1 1 1 0 Polymyxin resistance protein PmrD Iron_traffic PF04362.14 NODE_57577_length_293_cov_2.810078_g49638_i0reverse_frame_3 - 0.045 13.4 0.2 0.061 13.0 0.2 1.2 1 0 0 1 1 1 0 Bacterial Fe(2+) trafficking DNA_pol_B PF00136.21 NODE_57577_length_293_cov_2.810078_g49638_i0reverse_frame_2 - 7.4e-05 21.6 0.0 9.4e-05 21.3 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B WD40 PF00400.32 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 2.8e-16 59.6 4.8 6.2e-07 30.0 0.3 3.1 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 1.8e-10 41.0 0.7 0.00029 21.1 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 1.2e-06 27.5 0.4 0.018 13.7 0.0 2.0 1 1 1 2 2 2 2 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 0.024 13.4 0.2 0.16 10.6 0.1 1.9 1 1 1 2 2 2 0 Nup133 N terminal like Ge1_WD40 PF16529.5 NODE_57576_length_293_cov_2.891473_g49637_i0forward_frame_2 - 0.034 13.1 1.5 0.18 10.7 0.1 2.0 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Lip_A_acyltrans PF03279.13 NODE_57573_length_293_cov_3.124031_g49634_i0reverse_frame_2 - 0.00023 20.5 0.0 0.00028 20.2 0.0 1.1 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase CoA_transf_3 PF02515.17 NODE_57571_length_293_cov_3.360465_g49632_i0reverse_frame_2 - 3.7e-28 98.7 0.4 3.9e-28 98.6 0.4 1.0 1 0 0 1 1 1 1 CoA-transferase family III MiAMP1 PF09117.10 NODE_57571_length_293_cov_3.360465_g49632_i0forward_frame_2 - 0.0027 17.9 0.4 0.0043 17.2 0.4 1.4 1 0 0 1 1 1 1 MiAMP1 zf-B_box PF00643.24 NODE_57570_length_293_cov_3.562016_g49631_i0reverse_frame_2 - 0.0045 17.1 1.3 0.0069 16.5 1.3 1.3 1 0 0 1 1 1 1 B-box zinc finger Chordopox_A30L PF06015.12 NODE_57567_length_293_cov_3.899225_g49628_i0reverse_frame_3 - 0.0042 16.9 0.2 0.0061 16.4 0.2 1.3 1 0 0 1 1 1 1 Chordopoxvirus A30L protein PRKCSH-like PF12999.7 NODE_57567_length_293_cov_3.899225_g49628_i0reverse_frame_2 - 0.08 12.7 1.3 0.091 12.6 1.3 1.1 1 0 0 1 1 1 0 Glucosidase II beta subunit-like Ribosomal_L36 PF00444.18 NODE_57567_length_293_cov_3.899225_g49628_i0reverse_frame_2 - 3.3 8.0 9.7 0.63 10.3 0.9 2.9 3 0 0 3 3 3 0 Ribosomal protein L36 Ribosomal_L31 PF01197.18 NODE_57566_length_293_cov_3.906977_g49627_i0forward_frame_2 - 8.6e-14 51.5 0.0 1.3e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L31 Keratin_B2 PF01500.17 NODE_57565_length_293_cov_3.906977_g49626_i0reverse_frame_2 - 0.02 14.9 4.4 0.024 14.6 4.4 1.1 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein HCV_NS5a_1a PF08300.13 NODE_57564_length_293_cov_4.255814_g49625_i0reverse_frame_3 - 3.1 8.0 9.0 2.9 8.1 5.8 2.1 1 1 1 2 2 2 0 Hepatitis C virus non-structural 5a zinc finger domain NADH_4Fe-4S PF10589.9 NODE_57562_length_293_cov_6.523256_g49623_i0reverse_frame_3 - 0.057 13.5 0.0 0.087 12.9 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ldi PF18566.1 NODE_57560_length_293_cov_26.166667_g49621_i0reverse_frame_2 - 0.0098 15.4 0.1 0.011 15.3 0.1 1.1 1 0 0 1 1 1 1 Linalool dehydratase/isomerase Penaeidin PF05927.11 NODE_57549_length_293_cov_52.786822_g49610_i0reverse_frame_3 - 0.039 14.7 0.1 0.057 14.2 0.1 1.3 1 0 0 1 1 1 0 Penaeidin CC PF04942.14 NODE_57546_length_293_cov_59.848837_g49607_i0forward_frame_2 - 0.08 13.2 0.2 0.23 11.7 0.0 1.8 2 0 0 2 2 2 0 CC domain FOXO_KIX_bdg PF16675.5 NODE_57544_length_293_cov_64.023256_g49605_i0reverse_frame_3 - 0.13 12.6 0.3 0.17 12.2 0.3 1.2 1 0 0 1 1 1 0 KIX-binding domain of forkhead box O, CR2 Glyco_hydro_20b PF02838.15 NODE_57544_length_293_cov_64.023256_g49605_i0forward_frame_3 - 0.1 13.4 0.0 0.11 13.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, domain 2 Fer4_11 PF13247.6 NODE_57538_length_293_cov_80.496124_g49599_i0reverse_frame_2 - 0.0026 17.8 0.2 0.0034 17.5 0.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain DUF1263 PF06882.12 NODE_57537_length_293_cov_81.096899_g49598_i0reverse_frame_3 - 0.014 15.4 0.1 0.035 14.1 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1263) DUF5363 PF17320.2 NODE_57533_length_293_cov_98.286822_g49594_i0reverse_frame_3 - 0.0069 16.2 0.2 0.01 15.7 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5363) Herpeto_peptide PF14409.6 NODE_57533_length_293_cov_98.286822_g49594_i0forward_frame_2 - 7.2 6.9 8.9 0.51 10.6 0.7 2.8 1 1 2 3 3 3 0 Ribosomally synthesized peptide in Herpetosiphon TPD52 PF04201.15 NODE_57532_length_293_cov_102.453488_g49593_i0reverse_frame_2 - 0.042 13.5 0.0 0.057 13.0 0.0 1.1 1 0 0 1 1 1 0 Tumour protein D52 family TAF1D PF15333.6 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_3 - 0.055 13.2 3.9 0.066 12.9 3.9 1.1 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D SRX PF09201.10 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_2 - 0.0012 18.7 0.8 0.0015 18.4 0.8 1.1 1 0 0 1 1 1 1 SRX, signal recognition particle receptor alpha subunit Phage_int_SAM_4 PF13495.6 NODE_57531_length_293_cov_102.465116_g49592_i0reverse_frame_2 - 0.014 15.8 0.3 0.019 15.4 0.3 1.4 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Phospholamban PF04272.14 NODE_57526_length_293_cov_120.844961_g49587_i0forward_frame_3 - 3.1 7.3 10.8 7.1 6.2 1.3 2.3 2 0 0 2 2 2 0 Phospholamban tRNA_U5-meth_tr PF05958.11 NODE_57524_length_293_cov_137.379845_g49585_i0reverse_frame_3 - 1.9e-06 27.1 0.0 2.3e-06 26.9 0.0 1.0 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase DEC-1_C PF04626.13 NODE_57523_length_293_cov_182.608527_g49584_i0forward_frame_2 - 0.073 13.5 0.1 0.088 13.2 0.1 1.1 1 0 0 1 1 1 0 Dec-1 protein, C terminal region Shisa PF13908.6 NODE_57521_length_293_cov_211.550388_g49582_i0reverse_frame_2 - 0.021 15.1 0.6 0.028 14.7 0.6 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator ARL17 PF15840.5 NODE_57519_length_293_cov_325.325581_g49580_i0reverse_frame_3 - 0.081 13.3 0.1 0.12 12.7 0.1 1.5 1 0 0 1 1 1 0 ADP-ribosylation factor-like protein 17 MIT_LIKE_ACTX PF17556.2 NODE_57519_length_293_cov_325.325581_g49580_i0forward_frame_2 - 0.22 12.1 0.5 0.22 12.1 0.5 2.1 1 1 1 2 2 2 0 MIT-like atracotoxin family UPF1_Zn_bind PF09416.10 NODE_57514_length_293_cov_59889.635659_g49575_i0forward_frame_2 - 0.014 15.3 0.1 0.018 15.1 0.1 1.1 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) Ycf1 PF05758.12 NODE_57513_length_294_cov_0.926641_g49574_i0reverse_frame_3 - 1.2 6.9 5.5 1.2 6.9 5.5 1.0 1 0 0 1 1 1 0 Ycf1 DUF4714 PF15833.5 NODE_57513_length_294_cov_0.926641_g49574_i0forward_frame_2 - 0.13 12.2 0.3 0.29 11.1 0.3 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4714) DUF5439 PF17507.2 NODE_57510_length_294_cov_1.135135_g49571_i0reverse_frame_3 - 0.45 10.8 6.0 0.13 12.5 1.8 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5439) DUF872 PF05915.12 NODE_57510_length_294_cov_1.135135_g49571_i0forward_frame_3 - 0.063 13.5 0.1 0.07 13.3 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) DnaJ PF00226.31 NODE_57508_length_294_cov_1.301158_g49569_i0reverse_frame_2 - 4.3e-06 26.8 0.0 6.6e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain Urocanase PF01175.18 NODE_57505_length_294_cov_1.386100_g49566_i0reverse_frame_2 - 0.16 11.6 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Urocanase Rossmann-like domain PAX PF00292.18 NODE_57504_length_294_cov_1.386100_g49565_i0forward_frame_2 - 0.13 12.2 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 'Paired box' domain DUF3106 PF11304.8 NODE_57500_length_294_cov_1.413127_g49561_i0reverse_frame_2 - 0.039 14.4 2.7 0.053 14.0 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3106) RT_RNaseH PF17917.1 NODE_57489_length_294_cov_1.528958_g49550_i0reverse_frame_2 - 2.1e-06 28.0 0.0 2.4e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase DUF5344 PF17279.2 NODE_57488_length_294_cov_1.528958_g49549_i0reverse_frame_2 - 0.0087 16.6 0.4 0.015 15.8 0.1 1.6 2 0 0 2 2 2 1 Family of unknown function (DUF5344) DUF5315 PF17242.2 NODE_57488_length_294_cov_1.528958_g49549_i0reverse_frame_2 - 0.045 13.6 0.2 0.06 13.2 0.2 1.3 1 1 0 1 1 1 0 Disordered region of unknown function (DUF5315) DUF4812 PF16071.5 NODE_57484_length_294_cov_1.629344_g49545_i0forward_frame_2 - 0.0018 18.0 0.4 1.2 9.0 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF4812) Cytomega_TRL10 PF06084.11 NODE_57481_length_294_cov_1.687259_g49542_i0reverse_frame_3 - 0.073 13.1 0.1 0.094 12.7 0.1 1.1 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein CCDC53 PF10152.9 NODE_57479_length_294_cov_1.783784_g49540_i0reverse_frame_2 - 2.8 8.3 7.7 3.1 8.2 7.7 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex Toxin_15 PF07906.13 NODE_57475_length_294_cov_1.953668_g49536_i0forward_frame_3 - 4.3e-18 65.9 0.1 4.3e-18 65.9 0.1 1.0 1 0 0 1 1 1 1 ShET2 enterotoxin, N-terminal region TPR_8 PF13181.6 NODE_57473_length_294_cov_2.057915_g49534_i0reverse_frame_3 - 0.0085 16.2 0.7 0.014 15.5 0.7 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_57473_length_294_cov_2.057915_g49534_i0reverse_frame_3 - 0.0091 16.0 0.6 0.013 15.5 0.6 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat DUF1987 PF09345.10 NODE_57473_length_294_cov_2.057915_g49534_i0reverse_frame_3 - 0.13 12.0 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) Pro_sub2 PF18513.1 NODE_57471_length_294_cov_2.135135_g49532_i0reverse_frame_3 - 0.13 12.4 1.9 0.16 12.1 1.4 1.5 1 1 0 1 1 1 0 Prodomain subtilisin 2 CarbpepA_inh PF02977.15 NODE_57469_length_294_cov_2.142857_g49530_i0reverse_frame_2 - 4.4 7.2 11.8 7.1 6.5 3.7 2.4 2 1 0 2 2 2 0 Carboxypeptidase A inhibitor UvrA_inter PF17760.1 NODE_57468_length_294_cov_2.150579_g49529_i0forward_frame_3 - 0.051 13.7 0.0 0.07 13.2 0.0 1.4 1 1 0 1 1 1 0 UvrA interaction domain Adeno_terminal PF02459.15 NODE_57467_length_294_cov_2.150579_g49528_i0forward_frame_3 - 0.036 12.5 1.5 0.043 12.2 1.5 1.0 1 0 0 1 1 1 0 Adenoviral DNA terminal protein DUF2071 PF09844.9 NODE_57467_length_294_cov_2.150579_g49528_i0forward_frame_3 - 0.087 12.4 0.1 0.1 12.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (COG2071) DUF1492 PF07374.11 NODE_57467_length_294_cov_2.150579_g49528_i0forward_frame_2 - 0.021 15.0 0.4 0.039 14.1 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1492) EMP70 PF02990.16 NODE_57463_length_294_cov_2.189189_g49524_i0reverse_frame_2 - 0.15 10.7 0.1 0.16 10.6 0.1 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 SHIPPO-rpt PF07004.12 NODE_57463_length_294_cov_2.189189_g49524_i0reverse_frame_2 - 4.7 8.3 6.4 0.59 11.1 0.5 2.6 2 2 0 2 2 2 0 Sperm-tail PG-rich repeat DUF4212 PF13937.6 NODE_57463_length_294_cov_2.189189_g49524_i0forward_frame_3 - 0.067 13.6 3.3 0.081 13.3 3.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4212) FIIND PF13553.6 NODE_57463_length_294_cov_2.189189_g49524_i0forward_frame_2 - 0.081 12.3 0.1 0.099 12.0 0.1 1.0 1 0 0 1 1 1 0 Function to find CCDC24 PF15669.5 NODE_57458_length_294_cov_2.355212_g49519_i0reverse_frame_2 - 0.00099 19.0 0.1 0.0012 18.7 0.1 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 24 family FUSC-like PF12805.7 NODE_57458_length_294_cov_2.355212_g49519_i0reverse_frame_2 - 0.12 11.4 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS tRNA-synt_1_2 PF13603.6 NODE_57456_length_294_cov_2.393822_g49517_i0forward_frame_2 - 0.033 13.7 0.0 0.038 13.5 0.0 1.1 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 Flu_C_NS2 PF03555.14 NODE_57456_length_294_cov_2.393822_g49517_i0forward_frame_2 - 0.078 13.2 0.3 1.4 9.1 0.0 2.4 2 1 0 2 2 2 0 Influenza C non-structural protein (NS2) DUF2614 PF11023.8 NODE_57452_length_294_cov_2.702703_g49513_i0reverse_frame_3 - 0.09 12.9 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Zinc-ribbon containing domain EptA_B_N PF08019.12 NODE_57448_length_294_cov_3.046332_g49509_i0reverse_frame_2 - 0.0033 17.3 1.1 0.0052 16.7 0.7 1.5 1 1 0 1 1 1 1 Phosphoethanolamine transferase EptA/EptB DUF2585 PF10755.9 NODE_57448_length_294_cov_3.046332_g49509_i0reverse_frame_2 - 0.006 16.3 0.1 0.007 16.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2585) TEX19 PF15553.6 NODE_57447_length_294_cov_3.239382_g49508_i0forward_frame_2 - 0.039 13.9 2.3 0.051 13.5 2.3 1.1 1 0 0 1 1 1 0 Testis-expressed protein 19 Peptidase_S29 PF02907.15 NODE_57443_length_294_cov_17.027027_g49504_i0reverse_frame_2 - 0.00027 20.7 0.0 0.00029 20.6 0.0 1.1 1 0 0 1 1 1 1 Hepatitis C virus NS3 protease Stevor PF17410.2 NODE_57443_length_294_cov_17.027027_g49504_i0reverse_frame_2 - 0.00028 20.5 0.8 0.00034 20.3 0.8 1.0 1 0 0 1 1 1 1 Subtelomeric Variable Open Reading frame GLTSCR1 PF15249.6 NODE_57437_length_294_cov_36.737452_g49498_i0reverse_frame_3 - 0.089 13.2 1.1 0.12 12.8 1.1 1.3 1 0 0 1 1 1 0 Conserved region of unknown function on GLTSCR protein Ndc1_Nup PF09531.10 NODE_57437_length_294_cov_36.737452_g49498_i0forward_frame_3 - 2 7.0 6.4 1.9 7.0 6.4 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF2542 PF10808.8 NODE_57437_length_294_cov_36.737452_g49498_i0forward_frame_2 - 0.069 13.6 0.1 0.13 12.8 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2542) TOM6p PF15184.6 NODE_57430_length_294_cov_54.212355_g49491_i0forward_frame_3 - 0.14 11.9 0.2 0.21 11.4 0.2 1.4 1 0 0 1 1 1 0 Mitochondrial import receptor subunit TOM6 homolog Imm51 PF15595.6 NODE_57428_length_294_cov_57.660232_g49489_i0reverse_frame_3 - 0.0037 17.2 0.1 0.0047 16.8 0.1 1.2 1 0 0 1 1 1 1 Immunity protein 51 DUF2318 PF10080.9 NODE_57428_length_294_cov_57.660232_g49489_i0forward_frame_3 - 0.11 12.6 6.4 0.33 11.1 2.0 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) Hepsin-SRCR PF09272.10 NODE_57426_length_294_cov_59.216216_g49487_i0reverse_frame_3 - 0.017 15.6 0.1 0.021 15.3 0.1 1.2 1 0 0 1 1 1 0 Hepsin, SRCR domain C1_2 PF03107.16 NODE_57420_length_294_cov_68.764479_g49481_i0reverse_frame_3 - 0.0079 16.5 4.2 0.01 16.1 4.2 1.2 1 0 0 1 1 1 1 C1 domain zf-B_box PF00643.24 NODE_57420_length_294_cov_68.764479_g49481_i0reverse_frame_3 - 9.2 6.5 12.1 28 5.0 10.6 2.3 2 1 0 2 2 2 0 B-box zinc finger EccE PF11203.8 NODE_57420_length_294_cov_68.764479_g49481_i0forward_frame_3 - 0.021 15.1 0.2 0.027 14.8 0.2 1.2 1 0 0 1 1 1 0 Putative type VII ESX secretion system translocon, EccE zf-CXXC PF02008.20 NODE_57417_length_294_cov_74.374517_g49478_i0reverse_frame_2 - 0.57 10.3 7.4 6.8 6.8 7.4 2.3 1 1 0 1 1 1 0 CXXC zinc finger domain PilO PF04350.13 NODE_57416_length_294_cov_77.081081_g49477_i0reverse_frame_3 - 0.22 11.7 0.0 0.28 11.3 0.0 1.1 1 0 0 1 1 1 0 Pilus assembly protein, PilO Peptidase_C48 PF02902.19 NODE_57415_length_294_cov_78.409266_g49476_i0reverse_frame_3 - 3.5e-05 23.7 0.3 8.7e-05 22.4 0.0 1.6 1 1 1 2 2 2 1 Ulp1 protease family, C-terminal catalytic domain Got1 PF04178.12 NODE_57414_length_294_cov_79.115830_g49475_i0forward_frame_3 - 0.098 13.1 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Got1/Sft2-like family C1_1 PF00130.22 NODE_57414_length_294_cov_79.115830_g49475_i0forward_frame_2 - 0.37 10.7 5.7 0.76 9.7 5.7 1.6 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) WD40 PF00400.32 NODE_57412_length_294_cov_94.003861_g49473_i0reverse_frame_3 - 0.00086 20.1 0.2 0.33 11.9 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_57412_length_294_cov_94.003861_g49473_i0reverse_frame_3 - 0.082 13.2 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Chordopox_L2 PF05803.12 NODE_57408_length_294_cov_108.583012_g49469_i0reverse_frame_3 - 0.04 13.8 3.2 0.052 13.4 3.2 1.4 1 0 0 1 1 1 0 Chordopoxvirus L2 protein FANCI_HD1 PF14679.6 NODE_57408_length_294_cov_108.583012_g49469_i0reverse_frame_3 - 0.065 13.2 0.1 0.092 12.7 0.1 1.2 1 0 0 1 1 1 0 FANCI helical domain 1 DUF5542 PF17696.1 NODE_57408_length_294_cov_108.583012_g49469_i0reverse_frame_3 - 0.38 10.9 2.4 0.32 11.2 1.6 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5542) XPG_I PF00867.18 NODE_57406_length_294_cov_112.694981_g49467_i0forward_frame_2 - 0.082 13.3 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 XPG I-region Paramecium_SA PF01508.16 NODE_57402_length_294_cov_130.795367_g49463_i0reverse_frame_3 - 0.036 14.5 2.0 0.036 14.5 2.0 1.5 2 0 0 2 2 2 0 Paramecium surface antigen domain RecA_dep_nuc PF16786.5 NODE_57402_length_294_cov_130.795367_g49463_i0forward_frame_3 - 1.5 9.0 5.8 1.7 8.9 4.8 1.6 1 1 1 2 2 2 0 Recombination enhancement, RecA-dependent nuclease OAF PF14941.6 NODE_57400_length_294_cov_220.050193_g49461_i0forward_frame_2 - 0.14 11.6 0.1 0.16 11.4 0.1 1.0 1 0 0 1 1 1 0 Transcriptional regulator, Out at first OS-D PF03392.13 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 0.0055 16.8 3.3 0.75 9.9 0.7 2.3 2 0 0 2 2 2 2 Insect pheromone-binding family, A10/OS-D Vps36-NZF-N PF16988.5 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 0.0062 15.9 0.7 0.012 15.0 0.7 1.5 1 0 0 1 1 1 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain Sar8_2 PF03058.14 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 0.024 15.2 2.1 0.024 15.2 2.1 1.5 1 1 0 1 1 1 0 Sar8.2 family zf-Sec23_Sec24 PF04810.15 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 0.35 11.0 10.5 0.056 13.5 3.0 2.9 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger Zn_Tnp_IS1 PF03811.13 NODE_57398_length_294_cov_248.389961_g49459_i0reverse_frame_2 - 4 7.2 6.8 4.8 7.0 0.1 2.7 3 0 0 3 3 3 0 InsA N-terminal domain DUF2464 PF10240.9 NODE_57397_length_294_cov_490.749035_g49458_i0reverse_frame_3 - 0.14 11.7 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Multivesicular body subunit 12 Leg1 PF05612.12 NODE_57394_length_294_cov_1286.069498_g49455_i0reverse_frame_2 - 0.01 15.0 1.8 0.012 14.8 1.8 1.1 1 0 0 1 1 1 0 Leg1 DUF1376 PF07120.11 NODE_57394_length_294_cov_1286.069498_g49455_i0reverse_frame_2 - 0.086 13.2 0.9 0.23 11.8 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1376) BD_b_sandwich PF18820.1 ORF99016 - 0.073 13.1 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Bdellovibrio Beta-sandwich DUF3888 PF13027.6 ORF99016 - 0.087 13.3 2.0 0.14 12.6 2.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3888) Roc PF08477.13 ORF98799 - 0.00018 21.7 0.7 0.0004 20.6 0.0 1.9 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF98799 - 0.0029 17.2 0.0 0.0055 16.3 0.0 1.4 1 0 0 1 1 1 1 Ras family FokI_C PF02980.16 ORF98799 - 0.074 13.1 2.4 0.092 12.8 2.4 1.1 1 0 0 1 1 1 0 Restriction endonuclease FokI, catalytic domain FeoB_N PF02421.18 ORF98799 - 0.078 12.5 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 Ferrous iron transport protein B AAA_22 PF13401.6 ORF98799 - 0.079 13.2 2.6 0.36 11.1 0.8 2.0 1 1 1 2 2 2 0 AAA domain MCM_bind PF09739.9 ORF98799 - 0.079 11.4 7.2 0.089 11.2 7.2 1.0 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor MMR_HSR1 PF01926.23 ORF98799 - 0.1 12.7 1.3 0.34 11.0 0.0 2.1 2 1 0 2 2 2 0 50S ribosome-binding GTPase Connexin PF00029.19 ORF98799 - 0.26 11.0 5.8 0.26 11.0 5.8 1.1 1 0 0 1 1 1 0 Connexin TMPIT PF07851.13 ORF98799 - 0.69 9.1 5.5 0.82 8.9 5.5 1.0 1 0 0 1 1 1 0 TMPIT-like protein SRPRB PF09439.10 ORF98799 - 0.83 9.1 0.0 0.83 9.1 0.0 2.1 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit betaPIX_CC PF16523.5 ORF98799 - 0.94 9.3 21.0 1.2 9.1 12.0 2.1 1 1 1 2 2 2 0 betaPIX coiled coil Sec62 PF03839.16 ORF98799 - 3 7.3 7.8 3.2 7.2 7.8 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Presenilin PF01080.17 ORF98799 - 3.4 6.3 4.6 3.8 6.2 4.6 1.0 1 0 0 1 1 1 0 Presenilin EOS1 PF12326.8 ORF98799 - 4.8 7.1 5.4 6.5 6.6 5.4 1.2 1 0 0 1 1 1 0 N-glycosylation protein FTCD_C PF04961.12 ORF98799 - 7.3 6.3 6.8 9.4 5.9 6.8 1.2 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase ATG27 PF09451.10 ORF98611 - 0.0049 16.8 3.1 0.0068 16.3 3.1 1.2 1 0 0 1 1 1 1 Autophagy-related protein 27 DUF1700 PF08006.11 ORF98611 - 0.2 11.1 3.9 0.21 11.1 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) E1-E2_ATPase PF00122.20 ORF98611 - 0.26 10.8 1.3 0.3 10.6 1.3 1.0 1 0 0 1 1 1 0 E1-E2 ATPase Gemini_mov PF01708.16 ORF98611 - 6.8 6.5 6.3 1.4 8.8 1.1 2.1 2 0 0 2 2 2 0 Geminivirus putative movement protein Stk19 PF10494.9 ORF98314 - 0.11 12.1 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 Viral_Beta_CD PF04530.12 ORF98103 - 1.3 9.4 6.3 1.6 9.0 6.3 1.2 1 0 0 1 1 1 0 Viral Beta C/D like family HNF-1B_C PF04812.13 ORF97602 - 0.0048 16.8 0.2 0.005 16.7 0.2 1.0 1 0 0 1 1 1 1 Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus DUF1722 PF08349.11 ORF97368 - 0.018 15.3 1.1 0.021 15.1 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) WhiA_N PF10298.9 ORF97368 - 0.082 13.0 0.7 0.14 12.3 0.7 1.4 1 0 0 1 1 1 0 WhiA N-terminal LAGLIDADG-like domain zinc_ribbon_16 PF17034.5 ORF96548 - 0.027 14.7 0.1 0.032 14.4 0.1 1.2 1 0 0 1 1 1 0 Zinc-ribbon like family CmcI PF04989.12 ORF96065 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase PP2C PF00481.21 ORF95400 - 8.2e-09 35.5 0.0 8.5e-09 35.4 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C oligo_HPY PF08352.12 ORF95217 - 5.2e-20 71.7 0.1 6.5e-20 71.4 0.1 1.1 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AKAP28 PF14469.6 ORF95207 - 0.15 11.9 0.1 0.2 11.5 0.1 1.1 1 0 0 1 1 1 0 28 kDa A-kinase anchor DUF1700 PF08006.11 ORF947 - 0.0089 15.6 1.0 0.01 15.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) DUF4132 PF13569.6 ORF946 - 0.036 13.9 0.2 0.059 13.2 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4132) PHM7_cyt PF14703.6 ORF946 - 0.082 13.1 0.6 0.12 12.6 0.5 1.2 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter MinE PF03776.14 ORF946 - 0.093 12.7 0.4 0.94 9.5 0.1 2.2 2 0 0 2 2 2 0 Septum formation topological specificity factor MinE CmcI PF04989.12 ORF94122 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase DUF2706 PF10913.8 ORF93914 - 0.004 17.0 2.1 0.0069 16.2 2.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2706) Asp_Arg_Hydrox PF05118.15 ORF93868 - 0.027 14.3 2.7 0.031 14.1 2.7 1.1 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase DUF2996 PF11210.8 ORF93518 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) zf-Tim10_DDP PF02953.15 ORF92993 - 0.0055 16.3 1.7 0.01 15.5 1.6 1.6 1 1 0 1 1 1 1 Tim10/DDP family zinc finger zf-C6H2 PF15801.5 ORF92993 - 0.017 15.4 0.4 1.2 9.5 0.0 2.5 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding FAM177 PF14774.6 ORF91779 - 0.039 14.3 0.0 0.049 14.0 0.0 1.2 1 0 0 1 1 1 0 FAM177 family OMP_b-brl_3 PF14905.6 ORF91779 - 0.22 10.4 0.0 0.27 10.2 0.0 1.0 1 0 0 1 1 1 0 Outer membrane protein beta-barrel family DUF3980 PF13140.6 ORF91731 - 0.0082 16.6 0.0 0.01 16.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3980) ARL6IP6 PF15062.6 ORF91125 - 0.023 14.8 1.3 5.2 7.3 0.1 2.3 1 1 1 2 2 2 0 Haemopoietic lineage transmembrane helix DUF2996 PF11210.8 ORF9095 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks275.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks275.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks275.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks275.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CCM2_C PF16545.5 ORF86690 - 0.096 13.2 1.5 0.15 12.6 1.5 1.4 1 0 0 1 1 1 0 Cerebral cavernous malformation protein, harmonin-homology FN3_7 PF18447.1 ORF86644 - 0.28 11.5 2.8 1.1 9.6 0.1 2.1 1 1 1 2 2 2 0 Fibronectin type III domain HKR_ArcB_TM PF18415.1 ORF86263 - 0.37 11.6 5.2 0.6 11.0 0.3 2.1 2 0 0 2 2 2 0 Histidine kinase receptor ArcB trans-membrane domain DUF5345 PF17280.2 ORF8437 - 3.9 7.5 7.7 4.8 7.2 7.2 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5345) Asp_Arg_Hydrox PF05118.15 ORF81947 - 0.027 14.3 2.7 0.031 14.1 2.7 1.1 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase Herpes_UL49_5 PF05702.11 ORF81560 - 0.018 15.1 0.1 0.024 14.7 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein TraS PF10624.9 ORF81361 - 0.072 13.0 1.7 0.074 13.0 1.7 1.2 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS Gon7 PF08738.10 ORF8112 - 0.04 14.0 0.0 0.05 13.7 0.0 1.1 1 0 0 1 1 1 0 Gon7 family Peptidase_C33 PF05412.12 ORF8112 - 0.064 13.3 0.0 0.093 12.8 0.0 1.4 1 1 0 1 1 1 0 Equine arterivirus Nsp2-type cysteine proteinase CART PF06373.11 ORF80859 - 0.16 12.2 0.6 0.23 11.7 0.6 1.2 1 0 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) DUF2436 PF10365.9 ORF80455 - 0.16 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2436) Dishevelled PF02377.15 ORF79194 - 0.033 14.7 1.7 0.044 14.3 1.7 1.2 1 0 0 1 1 1 0 Dishevelled specific domain TagA PF12561.8 ORF79169 - 0.095 13.1 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 ToxR activated gene A lipoprotein domain MSL2-CXC PF16682.5 ORF78890 - 0.13 12.4 2.0 0.13 12.4 2.0 2.4 2 1 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Claudin_3 PF06653.11 ORF78890 - 0.15 12.0 0.7 0.19 11.7 0.7 1.1 1 0 0 1 1 1 0 Tight junction protein, Claudin-like Arm_vescicular PF18770.1 ORF7842 - 0.036 14.0 0.8 0.084 12.8 0.2 1.9 2 1 0 2 2 2 0 Armadillo tether-repeat of vescicular transport factor Cytochrom_c3_2 PF14537.6 ORF78389 - 0.016 15.6 1.0 0.031 14.7 1.0 1.5 1 1 0 1 1 1 0 Cytochrome c3 zf-4CXXC_R1 PF10497.9 ORF78389 - 1.1 9.5 8.0 6.6 7.0 8.0 2.2 1 1 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 DUF2996 PF11210.8 ORF78029 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) DUF1120 PF06551.12 ORF77485 - 0.083 13.1 0.2 0.1 12.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1120) Opy2 PF09463.10 ORF77485 - 2.9 8.3 11.4 0.36 11.2 3.2 2.6 2 1 1 3 3 3 0 Opy2 protein COX17 PF05051.13 ORF7734 - 0.16 12.3 6.5 0.18 12.2 2.4 2.3 2 1 0 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) CmcI PF04989.12 ORF76016 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase LEP503 PF15221.6 ORF74944 - 0.033 14.5 0.0 0.051 13.9 0.0 1.4 1 0 0 1 1 1 0 Lens epithelial cell protein LEP503 MCR_beta_N PF02783.15 ORF72056 - 0.064 12.9 0.4 0.094 12.3 0.4 1.2 1 0 0 1 1 1 0 Methyl-coenzyme M reductase beta subunit, N-terminal domain Minor_capsid_3 PF12691.7 ORF71503 - 0.014 15.7 0.0 0.015 15.7 0.0 1.1 1 0 0 1 1 1 0 Minor capsid protein from bacteriophage DUF4234 PF14018.6 ORF70923 - 1 9.5 4.2 2.3 8.4 0.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4234) DUF2013 PF09431.10 ORF70665 - 0.013 15.6 0.0 0.016 15.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2013) CPT_N PF16484.5 ORF70103 - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Carnitine O-palmitoyltransferase N-terminus NUMOD1 PF07453.13 ORF70007 - 0.053 13.8 0.2 0.14 12.4 0.0 1.8 2 0 0 2 2 2 0 NUMOD1 domain DUF126 PF01989.16 ORF69257 - 0.21 11.4 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 Aconitase X swivel domain PAX PF00292.18 ORF68954 - 0.054 13.4 0.1 0.077 12.9 0.1 1.3 1 0 0 1 1 1 0 'Paired box' domain HHH_6 PF14579.6 ORF68954 - 0.14 12.5 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Helix-hairpin-helix motif zf-P11 PF03854.14 ORF68677 - 0.042 13.5 0.5 0.097 12.4 0.5 1.6 1 0 0 1 1 1 0 P-11 zinc finger Defensin_5 PF18251.1 ORF6701 - 0.0076 16.3 0.3 0.019 15.0 0.3 1.7 1 0 0 1 1 1 1 Fungal defensin Copsin zf-DNA_Pol PF08996.10 ORF66994 - 2.3e-07 30.8 0.4 2.6e-07 30.5 0.4 1.0 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger Myticin-prepro PF10690.9 ORF66675 - 0.22 11.8 0.1 0.22 11.8 0.1 2.0 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel DUF2996 PF11210.8 ORF65431 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) DUF3292 PF11696.8 ORF65320 - 0.58 8.5 1.6 0.69 8.2 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) GalP_UDP_tr_C PF02744.17 ORF62279 - 0.045 13.5 0.1 0.054 13.2 0.1 1.2 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain ARL6IP6 PF15062.6 ORF62258 - 0.023 14.8 1.3 5.2 7.3 0.1 2.3 1 1 1 2 2 2 0 Haemopoietic lineage transmembrane helix Cadherin_tail PF15974.5 ORF6218 - 0.085 13.2 0.1 0.094 13.0 0.1 1.1 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region CmcI PF04989.12 ORF62153 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase Ig_2 PF13895.6 ORF61809 - 0.068 13.5 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Immunoglobulin domain TraS PF10624.9 ORF61526 - 0.072 13.0 1.7 0.074 13.0 1.7 1.2 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS CmcI PF04989.12 ORF60798 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase Pkinase PF00069.25 ORF60153 - 3.2e-16 59.5 1.5 3.5e-16 59.4 1.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60153 - 1.3e-11 44.3 0.6 1.4e-11 44.2 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase BRAP2 PF07576.12 ORF59848 - 0.034 14.4 0.9 0.04 14.2 0.9 1.1 1 0 0 1 1 1 0 BRCA1-associated protein 2 DUF4441 PF14536.6 ORF59848 - 0.043 14.0 0.7 0.052 13.7 0.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) DUF1700 PF08006.11 ORF59434 - 0.0089 15.6 1.0 0.01 15.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) DUF5381 PF17353.2 ORF59242 - 0.39 10.4 3.8 0.93 9.2 4.0 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5381) DUF5418 PF17439.2 ORF58904 - 0.0022 18.1 0.0 0.0026 17.9 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5418) DUF5639 PF18690.1 ORF58652 - 0.43 10.8 2.1 11 6.3 1.2 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5639) DUF4476 PF14771.6 ORF58031 - 0.042 14.1 0.5 5.3 7.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4476) ATG27 PF09451.10 ORF56866 - 0.0049 16.8 3.1 0.0068 16.3 3.1 1.2 1 0 0 1 1 1 1 Autophagy-related protein 27 DUF1700 PF08006.11 ORF56866 - 0.2 11.1 3.9 0.21 11.1 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) E1-E2_ATPase PF00122.20 ORF56866 - 0.26 10.8 1.3 0.3 10.6 1.3 1.0 1 0 0 1 1 1 0 E1-E2 ATPase Gemini_mov PF01708.16 ORF56866 - 6.8 6.5 6.3 1.4 8.8 1.1 2.1 2 0 0 2 2 2 0 Geminivirus putative movement protein zf-Tim10_DDP PF02953.15 ORF56831 - 0.0055 16.3 1.7 0.01 15.5 1.6 1.6 1 1 0 1 1 1 1 Tim10/DDP family zinc finger zf-C6H2 PF15801.5 ORF56831 - 0.017 15.4 0.4 1.2 9.5 0.0 2.5 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding DUF2854 PF11016.8 ORF56649 - 0.055 13.4 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) SH3BGR PF04908.15 ORF55059 - 0.061 13.5 0.0 0.071 13.3 0.0 1.2 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein YafQ_toxin PF15738.5 ORF5463 - 0.02 15.2 0.3 0.049 13.9 0.1 1.7 1 1 1 2 2 2 0 Bacterial toxin of type II toxin-antitoxin system, YafQ BRAP2 PF07576.12 ORF5463 - 0.084 13.1 1.9 0.099 12.9 1.9 1.1 1 0 0 1 1 1 0 BRCA1-associated protein 2 DUF4441 PF14536.6 ORF5463 - 0.14 12.3 5.1 0.22 11.7 5.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) Phage_GP20 PF06810.11 ORF54629 - 0.015 15.1 0.9 0.019 14.8 0.9 1.1 1 0 0 1 1 1 0 Phage minor structural protein GP20 Fib_alpha PF08702.10 ORF54629 - 0.016 15.4 0.6 0.018 15.2 0.6 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family CmcI PF04989.12 ORF54515 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase FidL_like PF15941.5 ORF54331 - 0.063 13.7 0.0 0.091 13.2 0.0 1.3 1 0 0 1 1 1 0 FidL-like putative membrane protein ABC_tran PF00005.27 ORF54064 - 9.6e-08 32.6 0.1 1.9e-07 31.7 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF54064 - 5.6e-05 22.7 0.3 7.1e-05 22.3 0.3 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Vps39_2 PF10367.9 ORF5318 - 5.1e-13 49.4 0.4 5.1e-13 49.4 0.4 1.3 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 RNA_pol_Rpb5_C PF01191.19 ORF5318 - 0.034 14.0 0.2 0.14 12.1 0.1 1.9 1 1 1 2 2 2 0 RNA polymerase Rpb5, C-terminal domain Myticin-prepro PF10690.9 ORF52764 - 0.22 11.8 0.1 0.22 11.8 0.1 2.0 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel Cpn10 PF00166.21 ORF51832 - 3.8e-30 103.8 1.2 4.1e-30 103.7 1.2 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit DUF728 PF05304.12 ORF51386 - 0.1 12.4 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF728) DUF5345 PF17280.2 ORF50442 - 3.9 7.5 7.7 4.8 7.2 7.2 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5345) Ribosomal_L18_c PF14204.6 ORF49096 - 0.053 14.5 2.3 0.08 13.9 2.3 1.3 1 0 0 1 1 1 0 Ribosomal L18 C-terminal region DUF2996 PF11210.8 ORF48417 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) DUF2990 PF11693.8 ORF47845 - 0.26 11.5 3.0 4.4 7.5 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2990) UPF0220 PF05255.11 ORF46898 - 0.026 14.1 0.1 0.027 14.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) DUF2231 PF09990.9 ORF46495 - 0.079 13.4 0.6 0.079 13.4 0.6 1.4 2 0 0 2 2 2 0 Predicted membrane protein (DUF2231) Hanta_G2 PF01561.16 ORF46325 - 1.3 7.5 4.0 1.7 7.2 4.0 1.1 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 DUF2706 PF10913.8 ORF44808 - 0.004 17.0 2.1 0.0069 16.2 2.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2706) U-box PF04564.15 ORF44602 - 3.2e-11 43.2 0.2 4.6e-11 42.7 0.2 1.2 1 0 0 1 1 1 1 U-box domain Vps39_2 PF10367.9 ORF44334 - 5.1e-13 49.4 0.4 5.1e-13 49.4 0.4 1.3 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 RNA_pol_Rpb5_C PF01191.19 ORF44334 - 0.034 14.0 0.2 0.14 12.1 0.1 1.9 1 1 1 2 2 2 0 RNA polymerase Rpb5, C-terminal domain PDR_assoc PF08370.11 ORF4362 - 7.4 6.4 7.2 35 4.2 7.2 2.0 1 1 0 1 1 1 0 Plant PDR ABC transporter associated Peptidase_U32_C PF16325.5 ORF42851 - 5.3e-08 33.0 0.0 7.8e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Peptidase family U32 C-terminal domain PP2C PF00481.21 ORF42823 - 1.5e-12 47.7 0.0 1.8e-12 47.5 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF42823 - 0.00025 21.0 0.0 0.00029 20.8 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) JAB PF01398.21 ORF41096 - 8.9e-16 57.9 0.0 1e-15 57.8 0.0 1.0 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease UPF0172 PF03665.13 ORF41096 - 0.013 15.5 0.0 0.017 15.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) Prok-JAB PF14464.6 ORF41096 - 0.045 13.5 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic homologs of the JAB domain CspB_prodomain PF18425.1 ORF40469 - 0.036 14.1 0.2 0.046 13.7 0.2 1.2 1 0 0 1 1 1 0 Csp protease B prodomain DUF2706 PF10913.8 ORF3956 - 0.004 17.0 2.1 0.0069 16.2 2.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2706) DUF1690 PF07956.11 ORF39381 - 0.0051 17.2 0.7 0.0055 17.1 0.7 1.1 1 0 0 1 1 1 1 Protein of Unknown function (DUF1690) RPW8 PF05659.11 ORF39381 - 0.03 14.0 0.5 0.041 13.6 0.5 1.3 1 1 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF3810 PF12725.7 ORF39336 - 0.0098 15.3 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3810) MCU PF04678.13 ORF39271 - 0.02 15.0 0.0 0.045 13.9 0.0 1.5 1 1 1 2 2 2 0 Mitochondrial calcium uniporter NS3_envE PF02723.14 ORF38947 - 0.13 12.4 5.2 0.2 11.8 5.2 1.3 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E LIP PF03583.14 ORF38803 - 0.01 15.2 0.3 0.012 15.0 0.3 1.0 1 0 0 1 1 1 0 Secretory lipase SBP56 PF05694.11 ORF38803 - 0.08 11.7 0.1 0.089 11.6 0.1 1.0 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) DUF5345 PF17280.2 ORF37000 - 3.9 7.5 7.7 4.8 7.2 7.2 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5345) zf-Tim10_DDP PF02953.15 ORF36262 - 0.0055 16.3 1.7 0.01 15.5 1.6 1.6 1 1 0 1 1 1 1 Tim10/DDP family zinc finger zf-C6H2 PF15801.5 ORF36262 - 0.017 15.4 0.4 1.2 9.5 0.0 2.5 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding Fis1_TPR_C PF14853.6 ORF36139 - 1.4e-05 25.0 0.6 2.4e-05 24.3 0.6 1.2 1 0 0 1 1 1 1 Fis1 C-terminal tetratricopeptide repeat TPR_11 PF13414.6 ORF36139 - 0.0024 17.5 0.0 0.0036 17.0 0.0 1.3 1 0 0 1 1 1 1 TPR repeat PDGF_N PF04692.13 ORF36139 - 0.023 15.4 0.4 0.032 15.0 0.4 1.3 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region TPR_19 PF14559.6 ORF36139 - 0.03 14.8 0.0 0.048 14.2 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF36139 - 0.035 14.3 0.0 0.11 12.8 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF36139 - 0.057 14.3 0.2 0.1 13.5 0.2 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF36139 - 0.057 13.3 0.0 0.094 12.6 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF36139 - 0.078 13.1 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat COMP PF11598.8 ORF36139 - 0.13 12.8 0.7 0.25 11.9 0.7 1.5 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein DUF1757 PF08560.10 ORF35975 - 0.086 12.9 0.2 0.091 12.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1757) DUF1987 PF09345.10 ORF34059 - 0.034 13.8 0.4 0.05 13.3 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) DUF1494 PF07379.11 ORF33958 - 0.16 11.8 0.1 0.2 11.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1494) Toxin_12 PF07740.12 ORF33491 - 0.6 10.8 6.4 4 8.2 0.4 2.8 3 0 0 3 3 3 0 Ion channel inhibitory toxin DUF2378 PF09536.10 ORF3311 - 0.032 14.1 0.0 0.033 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2378) DUF1542 PF07564.11 ORF3300 - 0.074 13.2 0.2 0.1 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1542) VIT1 PF01988.19 ORF3300 - 1.7 8.4 3.7 9.1 6.1 0.1 2.0 1 1 1 2 2 2 0 VIT family FPP PF05911.11 ORF30623 - 0.0073 14.6 6.1 0.0082 14.4 6.1 1.0 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil ALIX_LYPXL_bnd PF13949.6 ORF30623 - 0.015 14.6 2.4 0.019 14.3 2.4 1.2 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV Serine_rich PF08824.10 ORF30623 - 0.024 14.6 0.4 0.027 14.5 0.4 1.0 1 0 0 1 1 1 0 Serine rich protein interaction domain DUF3450 PF11932.8 ORF30623 - 0.047 13.0 1.6 0.056 12.7 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Spc29 PF17082.5 ORF30623 - 0.052 13.4 2.1 0.056 13.3 2.1 1.1 1 0 0 1 1 1 0 Spindle Pole Component 29 DUF349 PF03993.12 ORF30623 - 0.11 12.9 1.2 0.11 12.9 1.2 2.1 1 1 1 2 2 2 0 Domain of Unknown Function (DUF349) TMPIT PF07851.13 ORF30623 - 0.11 11.8 3.5 0.12 11.7 3.5 1.0 1 0 0 1 1 1 0 TMPIT-like protein Laminin_II PF06009.12 ORF30623 - 0.11 12.5 2.0 0.13 12.3 2.0 1.1 1 0 0 1 1 1 0 Laminin Domain II FapA PF03961.13 ORF30623 - 0.12 11.0 8.1 0.14 10.8 8.1 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A APG6_N PF17675.1 ORF30623 - 0.14 12.7 7.4 0.19 12.3 7.4 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 ORF30623 - 0.23 9.3 3.7 0.24 9.3 3.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Seryl_tRNA_N PF02403.22 ORF30623 - 0.3 11.3 8.0 0.38 11.0 8.0 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Spc24 PF08286.11 ORF30623 - 0.64 10.3 8.4 4 7.7 1.5 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DivIC PF04977.15 ORF30623 - 2.5 8.0 10.1 4.2 7.2 2.5 2.1 1 1 1 2 2 2 0 Septum formation initiator VGPC1_C PF16799.5 ORF30623 - 8.9 6.4 12.0 0.18 11.8 1.3 2.7 1 1 2 3 3 3 0 C-terminal membrane-localisation domain of ion-channel, VCN1 DEP PF00610.21 ORF27284 - 0.064 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) PMC2NT PF08066.12 ORF26706 - 0.028 15.1 0.9 0.042 14.5 0.7 1.3 1 1 0 1 1 1 0 PMC2NT (NUC016) domain BLOC1_2 PF10046.9 ORF26706 - 0.072 13.4 0.5 0.091 13.1 0.5 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1494 PF07379.11 ORF26642 - 0.16 11.8 0.1 0.2 11.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1494) TamB PF04357.13 ORF26610 - 1.3e-13 50.9 0.3 1.5e-13 50.8 0.3 1.0 1 0 0 1 1 1 1 TamB, inner membrane protein subunit of TAM complex MORN PF02493.20 ORF25044 - 6.8e-23 79.1 19.5 9.3e-08 31.5 3.1 4.8 5 0 0 5 5 5 4 MORN repeat Qn_am_d_aII PF14930.6 ORF25044 - 0.036 14.4 2.8 0.044 14.1 2.8 1.2 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain II DUF4113 PF13438.6 ORF25044 - 0.15 12.2 1.3 0.19 11.8 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4113) DUF3048_C PF17479.2 ORF25044 - 0.3 11.5 4.1 2.7 8.4 1.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain DUF4603 PF15376.6 ORF24038 - 1.7 5.9 4.3 1.9 5.8 4.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) COE1_DBD PF16422.5 ORF23933 - 0.057 12.9 2.9 0.075 12.5 2.9 1.1 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain Ferrochelatase PF00762.19 ORF23740 - 8.5e-35 120.3 0.0 9.9e-35 120.1 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase SprT-like PF10263.9 ORF23192 - 0.064 13.1 0.3 0.064 13.1 0.3 1.6 1 1 0 2 2 2 0 SprT-like family CmcI PF04989.12 ORF22764 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase DUF1876 PF08962.11 ORF21892 - 0.029 14.3 0.2 1.8 8.6 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1876) Glyco_hydro_98C PF08307.11 ORF21703 - 0.21 11.1 0.0 0.21 11.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 98 C-terminal domain Pkr1 PF08636.10 ORF20448 - 0.052 13.7 0.1 0.075 13.2 0.1 1.2 1 0 0 1 1 1 0 ER protein Pkr1 SWIM PF04434.17 ORF18528 - 0.083 12.6 2.5 3.6 7.3 0.9 2.4 2 0 0 2 2 2 0 SWIM zinc finger LupA PF18242.1 ORF18028 - 0.009 15.7 0.0 0.0098 15.6 0.0 1.1 1 0 0 1 1 1 1 Legionella ubiquitin-specific protease A domain HTH_17 PF12728.7 ORF18028 - 0.16 12.2 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain TFIID_NTD2 PF04494.15 ORF17936 - 0.018 15.3 0.0 0.026 14.7 0.0 1.3 1 0 0 1 1 1 0 WD40 associated region in TFIID subunit, NTD2 domain Methyltransf_7 PF03492.15 ORF17826 - 0.081 12.1 0.1 0.1 11.8 0.1 1.1 1 0 0 1 1 1 0 SAM dependent carboxyl methyltransferase AlcCBM31 PF11606.8 ORF16748 - 0.017 15.3 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Family 31 carbohydrate binding protein TMEM169 PF15052.6 ORF16748 - 0.022 14.9 0.6 0.028 14.5 0.6 1.2 1 0 0 1 1 1 0 TMEM169 protein family eIF3_p135 PF12807.7 ORF16517 - 0.086 12.9 2.5 0.092 12.8 2.5 1.1 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit 135 XPB_DRD PF18458.1 ORF15760 - 0.13 12.2 0.3 0.32 10.9 0.0 1.7 2 0 0 2 2 2 0 Xeroderma pigmentosum group B helicase damage recognition domain Colipase-like PF15083.6 ORF15419 - 0.25 11.5 6.2 0.35 11.0 2.8 2.0 1 1 1 2 2 2 0 Colipase-like RBB1NT PF08169.11 ORF152668 - 0.16 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 RBB1NT (NUC162) domain Agarase_CBM PF17992.1 ORF152461 - 0.22 11.1 0.0 0.31 10.6 0.0 1.3 1 0 0 1 1 1 0 Agarase CBM like domain DUF4191 PF13829.6 ORF1520 - 0.29 10.4 2.6 0.35 10.2 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF3043 PF11241.8 ORF1520 - 0.79 9.7 1.8 1.1 9.3 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF2335 PF10097.9 ORF151524 - 0.83 9.7 6.2 1.5 8.9 6.2 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2335) SIT PF15330.6 ORF151280 - 0.13 12.8 0.1 0.16 12.4 0.1 1.1 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT LYTB PF02401.18 ORF151200 - 0.0023 17.2 0.7 0.0024 17.2 0.7 1.0 1 0 0 1 1 1 1 LytB protein SCIMP PF15050.6 ORF151200 - 0.019 15.4 0.1 0.021 15.3 0.1 1.2 1 0 0 1 1 1 0 SCIMP protein NOB1_Zn_bind PF08772.11 ORF151200 - 0.095 12.9 1.5 0.12 12.6 0.7 1.5 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Mga PF05043.13 ORF149907 - 0.062 13.9 2.5 0.078 13.6 2.5 1.1 1 0 0 1 1 1 0 Mga helix-turn-helix domain Fer4_21 PF14697.6 ORF149605 - 0.19 11.9 12.3 0.53 10.5 12.1 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF5552 PF17706.1 ORF149605 - 1.1 9.0 5.8 1.3 8.7 5.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5552) DUF2706 PF10913.8 ORF14916 - 0.004 17.0 2.1 0.0069 16.2 2.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2706) TALPID3 PF15324.6 ORF149109 - 0.029 12.1 3.2 0.032 11.9 3.2 1.0 1 0 0 1 1 1 0 Hedgehog signalling target F-box PF00646.33 ORF147188 - 0.0053 16.6 0.2 0.015 15.2 0.1 1.8 1 1 1 2 2 2 1 F-box domain Cid2 PF09774.9 ORF147188 - 0.025 15.0 0.1 0.028 14.8 0.1 1.1 1 0 0 1 1 1 0 Caffeine-induced death protein 2 F-box-like PF12937.7 ORF147188 - 0.068 13.1 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 F-box-like Tachykinin PF02202.16 ORF14693 - 0.15 12.0 0.2 0.28 11.2 0.2 1.5 1 0 0 1 1 1 0 Tachykinin family DUF1356 PF07092.12 ORF146847 - 0.52 9.5 3.2 0.37 10.0 2.1 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1356) Cid2 PF09774.9 ORF14644 - 0.027 14.9 0.5 0.03 14.7 0.5 1.1 1 0 0 1 1 1 0 Caffeine-induced death protein 2 LRR_6 PF13516.6 ORF145201 - 0.00018 21.3 0.1 0.0036 17.2 0.1 2.4 2 0 0 2 2 2 1 Leucine Rich repeat CmcI PF04989.12 ORF144207 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase Ras PF00071.22 ORF144028 - 1.1e-32 112.9 0.1 1.1e-32 112.8 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF144028 - 1e-23 83.8 0.0 1.1e-23 83.7 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF144028 - 3.1e-07 30.0 0.1 3.2e-07 30.0 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF144028 - 1e-05 25.6 0.0 1.2e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF144028 - 0.033 13.5 0.0 0.036 13.4 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region FeoB_N PF02421.18 ORF144028 - 0.039 13.5 0.0 0.045 13.3 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B AAA_21 PF13304.6 ORF144028 - 0.04 13.7 0.0 0.04 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Ank_4 PF13637.6 ORF143725 - 4.2e-11 43.1 0.1 6.3e-11 42.6 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF143725 - 2.9e-07 30.6 1.6 0.0023 18.2 0.2 2.3 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF143725 - 3.1e-07 30.9 0.1 4.2e-07 30.4 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF143725 - 0.00069 19.9 0.4 0.025 15.0 0.1 2.5 3 0 0 3 3 3 1 Ankyrin repeat Ank_3 PF13606.6 ORF143725 - 0.11 13.1 0.2 1.1 10.0 0.1 2.4 3 0 0 3 3 3 0 Ankyrin repeat Tachykinin PF02202.16 ORF142545 - 0.15 12.0 0.2 0.28 11.2 0.2 1.5 1 0 0 1 1 1 0 Tachykinin family DUF1700 PF08006.11 ORF141660 - 0.0089 15.6 1.0 0.01 15.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) N-glycanase_C PF09113.10 ORF141378 - 0.084 12.6 1.0 0.73 9.6 1.0 2.0 1 1 0 1 1 1 0 Peptide-N-glycosidase F, C terminal KH_6 PF15985.5 ORF141378 - 0.21 11.9 1.8 9.3 6.7 0.9 2.2 2 0 0 2 2 2 0 KH domain ATG101 PF07855.12 ORF141067 - 0.039 13.9 0.5 0.046 13.7 0.5 1.2 1 0 0 1 1 1 0 Autophagy-related protein 101 MCU PF04678.13 ORF140631 - 7.5e-16 58.7 3.1 8.4e-16 58.6 3.1 1.0 1 0 0 1 1 1 1 Mitochondrial calcium uniporter Halogen_Hydrol PF10112.9 ORF140631 - 0.02 14.9 0.4 0.027 14.5 0.4 1.2 1 1 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PspB PF06667.12 ORF140631 - 0.028 14.5 0.3 0.044 13.8 0.3 1.3 1 0 0 1 1 1 0 Phage shock protein B DUF2854 PF11016.8 ORF139516 - 0.055 13.4 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) Spore_III_AF PF09581.10 ORF139414 - 0.062 13.3 1.5 0.074 13.1 1.5 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) EF-hand_7 PF13499.6 ORF139261 - 8.2e-05 23.0 0.2 0.00011 22.6 0.2 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF139261 - 0.0003 20.6 0.4 0.0004 20.2 0.4 1.3 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF139261 - 0.0035 16.8 0.6 0.0063 16.0 0.2 1.7 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF139261 - 0.011 15.6 0.2 0.057 13.4 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain HTH_Tnp_ISL3 PF13542.6 ORF139157 - 0.22 11.0 0.2 0.52 9.8 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Arm_3 PF16186.5 ORF139030 - 8.7e-16 57.2 0.1 1.2e-15 56.8 0.1 1.2 1 0 0 1 1 1 1 Atypical Arm repeat Diphtheria_C PF02763.14 ORF13774 - 0.16 11.6 0.8 11 5.6 0.1 2.0 1 1 1 2 2 2 0 Diphtheria toxin, C domain DUF5336 PF17270.2 ORF136804 - 0.092 12.4 2.2 0.86 9.2 2.2 2.0 1 1 0 1 1 1 0 Family of unknown function (DUF5336) DUF4695 PF15766.5 ORF136537 - 0.081 13.2 0.5 0.096 12.9 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4695) DUF5381 PF17353.2 ORF134911 - 0.18 11.5 4.5 0.26 11.1 4.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Polysacc_synt_C PF14667.6 ORF134783 - 0.053 13.6 5.5 0.063 13.3 5.5 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain E1_UFD PF09358.10 ORF133993 - 0.09 13.5 0.1 0.11 13.2 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin fold domain DUF1542 PF07564.11 ORF130887 - 0.074 13.2 0.2 0.1 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1542) VIT1 PF01988.19 ORF130887 - 1.7 8.4 3.7 9.1 6.1 0.1 2.0 1 1 1 2 2 2 0 VIT family Peptidase_S74 PF13884.6 ORF129783 - 0.17 12.3 0.1 0.51 10.7 0.1 1.9 1 1 0 1 1 1 0 Chaperone of endosialidase DUF2996 PF11210.8 ORF12934 - 0.035 14.5 0.1 0.04 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) DUF2854 PF11016.8 ORF129138 - 0.055 13.4 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) MNR PF15718.5 ORF128920 - 0.0035 15.6 0.1 0.0036 15.5 0.1 1.0 1 0 0 1 1 1 1 Protein moonraker U5_2-snRNA_bdg PF10597.9 ORF128889 - 0.062 13.4 1.3 0.079 13.0 1.3 1.1 1 0 0 1 1 1 0 U5-snRNA binding site 2 of PrP8 MinE PF03776.14 ORF128581 - 6.7 6.8 10.1 1.9 8.6 4.5 2.2 1 1 1 2 2 2 0 Septum formation topological specificity factor MinE TIP49_C PF17856.1 ORF127517 - 0.011 15.8 0.7 0.019 15.1 0.7 1.4 1 1 0 1 1 1 0 TIP49 AAA-lid domain zf-RING_5 PF14634.6 ORF126375 - 1.4e-05 24.9 7.5 2.5e-05 24.1 7.5 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF126375 - 5.1e-05 23.5 7.4 7.9e-05 22.9 7.4 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF126375 - 8.5e-05 22.5 7.9 0.00036 20.5 7.5 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF126375 - 0.00015 21.5 4.2 0.0014 18.4 4.3 2.2 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF126375 - 0.0028 17.5 10.0 0.011 15.6 10.1 1.9 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF126375 - 0.033 14.0 11.5 0.39 10.6 11.3 2.3 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 ORF126375 - 0.045 13.9 10.6 0.099 12.8 7.1 2.5 1 1 1 2 2 2 0 zinc RING finger of MSL2 Med27 PF11571.8 ORF126375 - 0.052 13.9 4.2 3.2 8.2 0.1 2.6 1 1 0 2 2 2 0 Mediator complex subunit 27 zf_UBZ PF18439.1 ORF126375 - 0.095 12.3 0.1 0.095 12.3 0.1 2.9 2 1 2 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-P11 PF03854.14 ORF126375 - 0.17 11.6 5.6 0.28 10.9 5.6 1.5 1 1 0 1 1 1 0 P-11 zinc finger zf-RING_4 PF14570.6 ORF126375 - 0.49 10.2 8.1 0.88 9.4 8.1 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-ribbon_3 PF13248.6 ORF126375 - 1.2 8.7 8.8 1.3 8.5 0.0 3.3 3 1 0 3 3 3 0 zinc-ribbon domain zf-C3HC4_4 PF15227.6 ORF126375 - 1.6 9.0 9.6 0.61 10.3 4.9 2.4 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING DUF1700 PF08006.11 ORF126368 - 0.0089 15.6 1.0 0.01 15.4 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) YrbL-PhoP_reg PF10707.9 ORF125893 - 0.031 13.8 0.0 0.036 13.6 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL SelP_N PF04592.14 ORF123911 - 0.16 11.4 26.9 0.21 10.9 26.9 1.3 1 0 0 1 1 1 0 Selenoprotein P, N terminal region CbtA PF09490.10 ORF123911 - 0.3 10.8 4.4 0.32 10.7 4.4 1.1 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtA) Zip PF02535.22 ORF123911 - 0.41 9.8 6.7 0.39 9.9 6.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF1494 PF07379.11 ORF123763 - 0.16 11.8 0.1 0.2 11.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1494) Lebercilin PF15619.6 ORF122795 - 0.0041 16.8 1.8 0.0043 16.7 1.8 1.2 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Pox_A_type_inc PF04508.12 ORF122795 - 0.0076 16.1 0.7 0.018 14.9 0.7 1.6 1 0 0 1 1 1 1 Viral A-type inclusion protein repeat MMR_HSR1_Xtn PF16897.5 ORF122795 - 0.011 15.7 1.5 0.026 14.5 1.4 1.7 1 1 1 2 2 2 0 C-terminal region of MMR_HSR1 domain DUF848 PF05852.11 ORF122795 - 0.022 14.9 1.9 0.025 14.7 1.9 1.1 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Med30 PF11315.8 ORF122795 - 0.024 14.8 3.4 0.097 12.9 3.4 1.8 1 1 0 1 1 1 0 Mediator complex subunit 30 TolA_bind_tri PF16331.5 ORF122795 - 0.034 14.2 2.0 0.034 14.2 2.0 1.8 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF724 PF05266.14 ORF122795 - 0.042 13.7 4.8 0.042 13.7 4.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DivIC PF04977.15 ORF122795 - 0.051 13.4 2.9 0.067 13.0 2.7 1.4 1 1 0 1 1 1 0 Septum formation initiator Nup54 PF13874.6 ORF122795 - 0.053 13.6 1.8 0.057 13.5 1.8 1.1 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 TssO PF17561.2 ORF122795 - 0.059 13.5 9.2 0.072 13.2 9.2 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO Atg14 PF10186.9 ORF122795 - 0.067 12.3 7.3 0.066 12.3 7.3 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Baculo_PEP_C PF04513.12 ORF122795 - 0.075 13.1 1.4 0.095 12.7 1.4 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus CC2-LZ PF16516.5 ORF122795 - 0.18 12.2 5.1 0.26 11.7 5.1 1.3 1 0 0 1 1 1 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator FlaC_arch PF05377.11 ORF122795 - 0.29 11.5 5.3 3.7 8.0 5.3 2.1 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) HEAT_2 PF13646.6 ORF122545 - 0.22 12.0 0.0 0.28 11.6 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats RmlD_sub_bind PF04321.17 ORF122163 - 0.14 11.2 1.0 0.16 11.1 1.0 1.1 1 0 0 1 1 1 0 RmlD substrate binding domain DCAF15_WD40 PF14939.6 ORF12194 - 0.12 12.0 1.9 0.15 11.7 1.9 1.1 1 0 0 1 1 1 0 DDB1-and CUL4-substrate receptor 15, WD repeat GH3 PF03321.13 ORF121470 - 0.12 11.2 0.1 0.12 11.2 0.1 1.0 1 0 0 1 1 1 0 GH3 auxin-responsive promoter Nepo_coat_N PF03689.15 ORF121199 - 0.059 13.3 0.2 0.091 12.7 0.2 1.2 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain DUF4714 PF15833.5 ORF121199 - 0.65 10.0 3.6 0.85 9.6 3.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) CAF1A PF12253.8 ORF120736 - 0.065 13.4 6.5 0.081 13.1 6.5 1.2 1 0 0 1 1 1 0 Chromatin assembly factor 1 subunit A HoxA13_N PF12284.8 ORF12052 - 0.5 11.0 8.7 0.52 10.9 7.2 1.6 1 1 1 2 2 2 0 Hox protein A13 N terminal DUF1125 PF06563.11 ORF120165 - 0.08 12.9 0.1 2 8.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1125) HIGH_NTase1 PF05636.11 ORF119911 - 0.043 13.0 0.0 0.072 12.3 0.0 1.3 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase HSDR_N_2 PF13588.6 ORF119560 - 0.021 14.8 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) CmcI PF04989.12 ORF119540 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase Vmethyltransf PF01660.17 ORF119069 - 0.062 12.2 0.0 0.074 11.9 0.0 1.0 1 0 0 1 1 1 0 Viral methyltransferase DUF624 PF04854.14 ORF119069 - 0.15 12.2 1.0 0.33 11.1 1.0 1.5 1 1 0 1 1 1 0 Protein of unknown function, DUF624 GPHH PF16905.5 ORF118866 - 0.045 13.5 0.1 0.077 12.8 0.1 1.3 1 0 0 1 1 1 0 Voltage-dependent L-type calcium channel, IQ-associated DUF220 PF02713.14 ORF118612 - 0.11 12.6 0.0 1.2 9.3 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function DUF220 Fur_reg_FbpB PF13040.6 ORF118612 - 0.18 11.4 0.1 2.5 7.7 0.0 2.1 2 0 0 2 2 2 0 Fur-regulated basic protein B MORN PF02493.20 ORF118572 - 0.34 10.9 5.9 0.31 11.0 0.7 3.1 3 0 0 3 3 3 0 MORN repeat THOC7 PF05615.13 ORF117537 - 0.0098 16.2 7.6 0.013 15.8 7.6 1.1 1 0 0 1 1 1 1 Tho complex subunit 7 DUF3322 PF11795.8 ORF117537 - 0.019 15.0 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) APG6_N PF17675.1 ORF117537 - 0.02 15.4 7.5 0.027 15.0 7.5 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region Seryl_tRNA_N PF02403.22 ORF117537 - 0.029 14.6 6.7 0.033 14.4 6.7 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Fzo_mitofusin PF04799.13 ORF117537 - 0.074 12.6 4.0 0.086 12.4 4.0 1.1 1 0 0 1 1 1 0 fzo-like conserved region FapA PF03961.13 ORF117537 - 0.3 9.6 6.2 0.37 9.3 6.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4140 PF13600.6 ORF117537 - 0.64 10.5 6.8 9.5 6.7 6.8 2.1 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) HALZ PF02183.18 ORF117537 - 1 9.7 11.1 5.5 7.3 1.8 2.5 1 1 1 2 2 2 0 Homeobox associated leucine zipper ZapB PF06005.12 ORF117537 - 1.1 9.8 13.9 2.1 8.8 10.2 2.1 1 1 0 1 1 1 0 Cell division protein ZapB DivIC PF04977.15 ORF117537 - 5.8 6.8 12.3 7.2 6.5 1.0 2.4 1 1 1 2 2 2 0 Septum formation initiator FTH PF01827.27 ORF117253 - 0.026 14.3 0.4 0.031 14.1 0.4 1.2 1 0 0 1 1 1 0 FTH domain Fer4_21 PF14697.6 ORF117153 - 1e-18 67.2 11.3 1.3e-18 66.9 11.3 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 ORF117153 - 1.2e-10 40.7 18.0 2.2e-05 24.1 6.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 ORF117153 - 5.7e-09 36.4 35.6 1.4e-05 25.6 15.5 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF117153 - 9.9e-07 28.6 16.2 9.1e-06 25.5 1.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 ORF117153 - 6.1e-06 26.0 16.8 0.0018 18.3 2.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 ORF117153 - 6.8e-06 26.1 14.2 6.6e-05 22.9 13.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF117153 - 2e-05 24.7 25.1 0.00016 21.8 16.2 1.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 ORF117153 - 0.0011 19.7 14.7 0.0072 17.1 1.9 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF117153 - 0.0017 18.8 13.6 0.085 13.4 4.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF117153 - 0.0021 18.5 16.1 0.0021 18.4 3.3 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 ORF117153 - 0.015 15.7 15.8 0.52 10.8 3.7 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF117153 - 0.025 15.5 13.7 0.036 15.0 1.9 2.3 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 ORF117153 - 1 10.0 15.0 4 8.0 1.9 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Pkinase PF00069.25 ORF117114 - 3.2e-16 59.5 1.5 3.5e-16 59.4 1.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF117114 - 1.3e-11 44.3 0.6 1.4e-11 44.2 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Aminotran_3 PF00202.21 ORF11655 - 0.014 14.1 0.9 0.015 14.0 0.9 1.0 1 0 0 1 1 1 0 Aminotransferase class-III Ribosomal_L28e PF01778.17 ORF116269 - 0.091 13.5 4.3 0.11 13.2 4.3 1.1 1 0 0 1 1 1 0 Ribosomal L28e protein family HZS_alpha PF18582.1 ORF116123 - 0.16 12.5 0.0 0.17 12.4 0.0 1.2 1 0 0 1 1 1 0 Hydrazine synthase alpha subunit middle domain Sigma70_r4 PF04545.16 ORF114638 - 0.023 14.2 0.1 0.048 13.2 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 Pkinase PF00069.25 ORF114627 - 3.2e-16 59.5 1.5 3.5e-16 59.4 1.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF114627 - 1.3e-11 44.3 0.6 1.4e-11 44.2 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RexB PF15968.5 ORF113689 - 7.8 7.0 12.0 1.6 9.2 4.1 2.1 1 1 1 2 2 2 0 Membrane-anchored ion channel, Abi component Seryl_tRNA_N PF02403.22 ORF113302 - 0.011 16.0 0.2 0.014 15.6 0.2 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain WGG PF10273.9 ORF113302 - 0.11 13.2 0.1 0.74 10.5 0.1 1.9 1 1 1 2 2 2 0 Pre-rRNA-processing protein TSR2 Dexa_ind PF15198.6 ORF111623 - 0.077 13.1 3.0 0.11 12.6 3.0 1.2 1 0 0 1 1 1 0 Dexamethasone-induced DUF244 PF03112.14 ORF110598 - 0.0092 15.8 0.4 0.012 15.5 0.4 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (ORF7) DUF SOR PF07682.11 ORF11001 - 0.061 12.2 0.0 0.073 12.0 0.0 1.1 1 0 0 1 1 1 0 Sulphur oxygenase reductase DUF2272 PF10030.9 ORF110005 - 0.0066 16.2 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2272) STAS_2 PF13466.6 ORF109555 - 4.4e-18 65.4 0.1 5.1e-18 65.2 0.1 1.1 1 0 0 1 1 1 1 STAS domain STAS PF01740.21 ORF109555 - 1.1e-05 25.0 0.0 1.4e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 STAS domain DUF2198 PF09964.9 ORF109547 - 0.064 13.3 4.4 0.036 14.1 2.1 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2198) DUF1815 PF08844.10 ORF108512 - 0.12 12.4 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) CmcI PF04989.12 ORF108471 - 0.056 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase COE1_DBD PF16422.5 ORF108465 - 0.057 12.9 2.9 0.075 12.5 2.9 1.1 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain CCAP PF11105.8 ORF107111 - 0.23 11.4 1.7 0.26 11.2 1.7 1.1 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a Vac14_Fig4_bd PF11916.8 ORF106774 - 8.8e-08 32.0 0.1 1.2e-07 31.5 0.0 1.3 1 1 0 1 1 1 1 Vacuolar protein 14 C-terminal Fig4p binding Rep_fac_C PF08542.11 ORF106774 - 0.02 15.3 0.2 0.038 14.4 0.2 1.4 1 0 0 1 1 1 0 Replication factor C C-terminal domain IBP39 PF11422.8 ORF106774 - 0.044 13.5 0.5 0.051 13.3 0.5 1.1 1 0 0 1 1 1 0 Initiator binding protein 39 kDa YmgB PF10798.8 ORF106774 - 0.067 13.0 0.2 0.13 12.1 0.2 1.5 1 0 0 1 1 1 0 Biofilm development protein YmgB/AriR YppF PF14178.6 ORF106774 - 0.078 12.9 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 YppF-like protein Caudo_TAP PF02413.17 ORF106768 - 0.065 13.4 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK TTL PF03133.15 ORF106693 - 0.0058 15.8 2.1 0.011 14.9 0.0 2.1 2 1 0 2 2 2 1 Tubulin-tyrosine ligase family MA3 PF02847.17 ORF106693 - 0.029 14.4 0.2 0.063 13.3 0.1 1.5 1 1 0 1 1 1 0 MA3 domain COMM_domain PF07258.14 ORF105291 - 1e-10 41.6 0.0 1.3e-10 41.2 0.0 1.1 1 0 0 1 1 1 1 COMM domain TMEM132D_C PF15706.5 ORF104976 - 0.44 10.4 2.9 0.9 9.4 2.9 1.7 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Spt4 PF06093.13 ORF103242 - 9.5e-25 86.5 0.3 1.1e-24 86.3 0.3 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger Cucumo_coat PF00760.18 ORF102799 - 0.23 11.1 0.0 0.28 10.8 0.0 1.1 1 0 0 1 1 1 0 Cucumovirus coat protein L-fibroin PF05849.11 ORF102599 - 0.041 13.2 0.1 0.046 13.0 0.1 1.0 1 0 0 1 1 1 0 Fibroin light chain (L-fibroin) DUF1897 PF09005.10 ORF102551 - 0.11 11.9 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1897) HlyD PF00529.20 ORF101900 - 5e-05 23.1 0.0 7.5e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Methyltransf_10 PF05971.12 ORF101773 - 0.00018 21.0 0.0 0.00023 20.6 0.0 1.2 1 0 0 1 1 1 1 RNA methyltransferase Pkinase PF00069.25 ORF101721 - 3.2e-16 59.5 1.5 3.5e-16 59.4 1.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101721 - 1.3e-11 44.3 0.6 1.4e-11 44.2 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase MAJIN PF15077.6 ORF101555 - 0.077 12.8 0.8 0.086 12.6 0.8 1.1 1 0 0 1 1 1 0 Membrane-anchored junction protein DUF2854 PF11016.8 ORF101018 - 0.055 13.4 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) Lamprin PF06403.11 NODE_58585_length_286_cov_1.163347_g50646_i0forward_frame_1 - 0.013 15.5 2.3 0.019 15.0 2.3 1.3 1 0 0 1 1 1 0 Lamprin GAIN_A PF18619.1 NODE_58582_length_286_cov_1.239044_g50643_i0forward_frame_1 - 8.3 6.7 6.8 1.4 9.2 0.7 2.3 2 1 0 2 2 2 0 GPCR-Autoproteolysis-INducing (GAIN) subdomain A UL40 PF10682.9 NODE_58581_length_286_cov_1.266932_g50642_i0forward_frame_1 - 0.064 12.9 0.3 0.072 12.8 0.3 1.1 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 DUF1685 PF07939.11 NODE_58577_length_286_cov_1.334661_g50638_i0reverse_frame_1 - 0.031 14.0 0.4 0.61 9.9 0.4 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1685) Spore-coat_CotZ PF10612.9 NODE_58573_length_286_cov_1.378486_g50634_i0reverse_frame_1 - 0.028 14.6 2.1 0.039 14.1 1.9 1.3 1 1 0 1 1 1 0 Spore coat protein Z YBD PF17725.1 NODE_58571_length_286_cov_1.402390_g50632_i0forward_frame_1 - 0.039 13.8 0.1 0.045 13.6 0.1 1.1 1 0 0 1 1 1 0 YAP binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks276.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks276.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks276.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks276.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:23:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RepA1_leader PF08048.12 NODE_58566_length_286_cov_1.565737_g50627_i0reverse_frame_1 - 0.76 10.1 5.3 0.68 10.3 2.7 2.0 2 0 0 2 2 2 0 Tap RepA1 leader peptide Pkinase PF00069.25 NODE_58564_length_286_cov_1.589641_g50625_i0forward_frame_1 - 0.03 13.7 0.1 0.033 13.5 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58564_length_286_cov_1.589641_g50625_i0forward_frame_1 - 0.04 13.2 0.0 0.043 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase zf_C2H2_6 PF18450.1 NODE_58553_length_286_cov_1.956175_g50614_i0reverse_frame_1 - 0.89 9.3 5.2 0.31 10.8 1.9 2.0 2 0 0 2 2 2 0 Zinc Finger domain Caveolin PF01146.17 NODE_58552_length_286_cov_1.964143_g50613_i0forward_frame_1 - 0.075 13.0 2.1 0.094 12.7 2.1 1.1 1 0 0 1 1 1 0 Caveolin Lamprin PF06403.11 NODE_58547_length_286_cov_2.047809_g50608_i0forward_frame_1 - 0.056 13.4 3.3 0.063 13.2 3.3 1.1 1 0 0 1 1 1 0 Lamprin GTP_EFTU PF00009.27 NODE_58542_length_286_cov_2.167331_g50603_i0reverse_frame_1 - 7.2e-09 35.5 0.1 8.1e-09 35.3 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Met_asp_mut_E PF06368.11 NODE_58542_length_286_cov_2.167331_g50603_i0reverse_frame_1 - 0.042 12.3 0.0 0.048 12.1 0.0 1.0 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) SAGA-Tad1 PF12767.7 NODE_58539_length_286_cov_2.215139_g50600_i0reverse_frame_1 - 0.012 15.3 1.1 0.013 15.2 1.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit Flavi_glycoprot PF00869.20 NODE_58539_length_286_cov_2.215139_g50600_i0reverse_frame_1 - 0.17 11.1 0.1 0.2 10.8 0.1 1.1 1 0 0 1 1 1 0 Flavivirus glycoprotein, central and dimerisation domains AAA_23 PF13476.6 NODE_58539_length_286_cov_2.215139_g50600_i0reverse_frame_1 - 4.2 7.8 8.6 4.8 7.6 8.6 1.0 1 0 0 1 1 1 0 AAA domain DUF3446 PF11928.8 NODE_58535_length_286_cov_2.342629_g50596_i0reverse_frame_1 - 1.6 9.1 8.0 4.3 7.7 8.0 1.8 1 1 0 1 1 1 0 Early growth response N-terminal domain Med3 PF11593.8 NODE_58535_length_286_cov_2.342629_g50596_i0reverse_frame_1 - 9.3 5.3 13.6 9.4 5.3 13.6 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal PhoR PF11808.8 NODE_58533_length_286_cov_2.390438_g50594_i0forward_frame_1 - 0.069 13.6 0.0 0.51 10.8 0.0 2.0 2 0 0 2 2 2 0 Phosphate regulon sensor protein PhoR FA_desaturase PF00487.24 NODE_58532_length_286_cov_2.398406_g50593_i0forward_frame_1 - 9 6.0 10.2 11 5.8 10.2 1.2 1 0 0 1 1 1 0 Fatty acid desaturase BMFP PF04380.13 NODE_58530_length_286_cov_2.438247_g50591_i0forward_frame_1 - 2.5e-12 47.1 3.6 3.2e-12 46.7 3.6 1.2 1 0 0 1 1 1 1 Membrane fusogenic activity SlyX PF04102.12 NODE_58530_length_286_cov_2.438247_g50591_i0forward_frame_1 - 0.068 13.8 0.9 0.096 13.3 0.9 1.1 1 0 0 1 1 1 0 SlyX SUI1 PF01253.22 NODE_58525_length_286_cov_2.697211_g50586_i0reverse_frame_1 - 0.026 15.0 0.1 0.038 14.5 0.1 1.3 1 0 0 1 1 1 0 Translation initiation factor SUI1 Diphtheria_C PF02763.14 NODE_58524_length_286_cov_2.768924_g50585_i0reverse_frame_1 - 0.0019 17.9 0.0 0.0022 17.7 0.0 1.0 1 0 0 1 1 1 1 Diphtheria toxin, C domain Penicil_amidase PF01804.18 NODE_58515_length_286_cov_3.111554_g50576_i0forward_frame_1 - 0.00049 19.2 0.0 0.00051 19.1 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase COPI_assoc PF08507.10 NODE_58512_length_286_cov_3.697211_g50573_i0forward_frame_1 - 0.27 11.3 4.6 0.055 13.5 1.1 1.5 2 0 0 2 2 2 0 COPI associated protein Orexin_rec2 PF03827.13 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.014 15.4 0.0 0.02 14.9 0.0 1.3 1 0 0 1 1 1 0 Orexin receptor type 2 DUF4972 PF16342.5 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.019 14.7 0.7 0.022 14.4 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) Lectin_N PF03954.14 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.064 13.0 0.2 0.083 12.6 0.2 1.2 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF2179 PF10035.9 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.12 12.2 1.0 0.2 11.4 1.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) Tubulin PF00091.25 NODE_58496_length_286_cov_49.513944_g50557_i0reverse_frame_1 - 0.17 12.1 0.3 0.27 11.4 0.3 1.4 1 1 1 2 2 2 0 Tubulin/FtsZ family, GTPase domain CpXC PF14353.6 NODE_58484_length_286_cov_63.673307_g50545_i0reverse_frame_1 - 0.08 13.0 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 CpXC protein Rtf2 PF04641.12 NODE_58483_length_286_cov_64.266932_g50544_i0reverse_frame_1 - 3.3e-05 23.4 0.3 3.4e-05 23.3 0.3 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger MORN PF02493.20 NODE_58481_length_286_cov_69.733068_g50542_i0reverse_frame_1 - 0.0086 15.9 0.2 0.021 14.7 0.1 1.7 2 0 0 2 2 2 1 MORN repeat zf-RING_5 PF14634.6 NODE_58473_length_286_cov_103.350598_g50534_i0reverse_frame_1 - 0.09 12.8 0.6 0.13 12.2 0.1 1.7 2 0 0 2 2 2 0 zinc-RING finger domain CENP-I PF07778.11 NODE_58469_length_286_cov_112.788845_g50530_i0reverse_frame_1 - 1.2 7.8 6.0 1.3 7.7 6.0 1.0 1 0 0 1 1 1 0 Mis6 Podoplanin PF05808.11 NODE_58469_length_286_cov_112.788845_g50530_i0forward_frame_1 - 0.078 13.1 0.1 0.084 13.0 0.1 1.1 1 0 0 1 1 1 0 Podoplanin DUF5558 PF17713.1 NODE_58465_length_286_cov_129.286853_g50526_i0reverse_frame_1 - 0.018 15.4 0.5 0.026 14.9 0.5 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5558) DUF1422 PF07226.11 NODE_58463_length_286_cov_223.055777_g50524_i0reverse_frame_1 - 0.026 14.5 0.1 0.033 14.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) DUF485 PF04341.12 NODE_58463_length_286_cov_223.055777_g50524_i0reverse_frame_1 - 0.054 13.4 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 Vpu PF00558.19 NODE_58463_length_286_cov_223.055777_g50524_i0reverse_frame_1 - 1.9 8.3 5.0 0.16 11.7 0.6 1.5 2 0 0 2 2 2 0 Vpu protein DUF3724 PF12521.8 NODE_58461_length_286_cov_257.430279_g50522_i0reverse_frame_1 - 0.15 12.0 2.1 0.25 11.3 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3724) Treslin_N PF15292.6 NODE_58456_length_286_cov_390.697211_g50517_i0forward_frame_1 - 0.035 12.5 0.4 0.043 12.2 0.4 1.0 1 0 0 1 1 1 0 Treslin N-terminus DUF1249 PF06853.12 NODE_58453_length_286_cov_1214.832669_g50514_i0reverse_frame_1 - 0.035 14.1 0.1 0.045 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1249) Na_H_antiporter PF03553.14 NODE_58453_length_286_cov_1214.832669_g50514_i0forward_frame_1 - 0.0082 15.4 0.2 0.0082 15.4 0.2 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter family Prolactin_RP PF15172.6 NODE_58448_length_287_cov_1.138889_g50509_i0reverse_frame_1 - 1.5 8.5 4.7 2.5 7.8 4.7 1.3 1 0 0 1 1 1 0 Prolactin-releasing peptide DUF2251 PF10008.9 NODE_58445_length_287_cov_1.246032_g50506_i0reverse_frame_1 - 0.02 15.0 2.2 0.027 14.5 2.2 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2251) DUF2851 PF11013.8 NODE_58443_length_287_cov_1.265873_g50504_i0reverse_frame_1 - 0.093 11.7 0.5 0.12 11.4 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2851) Statherin PF03875.13 NODE_58441_length_287_cov_1.269841_g50502_i0reverse_frame_1 - 1.1 9.4 6.5 2 8.6 6.5 1.4 1 0 0 1 1 1 0 Statherin Herpes_pp85 PF04637.12 NODE_58439_length_287_cov_1.289683_g50500_i0forward_frame_1 - 0.029 12.8 0.2 0.032 12.7 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF559 PF04480.12 NODE_58436_length_287_cov_1.408730_g50497_i0forward_frame_1 - 0.043 13.7 0.0 0.055 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF559) Glyco_hydro_11 PF00457.17 NODE_58433_length_287_cov_1.460317_g50494_i0reverse_frame_1 - 0.065 12.9 0.0 0.073 12.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 11 SH3_4 PF06347.13 NODE_58408_length_287_cov_2.083333_g50469_i0forward_frame_1 - 0.088 12.6 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Bacterial SH3 domain DUF5542 PF17696.1 NODE_58407_length_287_cov_2.095238_g50468_i0forward_frame_1 - 0.16 12.1 0.9 0.23 11.6 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5542) PPV_E1_C PF00519.17 NODE_58402_length_287_cov_2.206349_g50463_i0reverse_frame_1 - 0.0063 15.4 0.1 0.0073 15.2 0.1 1.0 1 0 0 1 1 1 1 Papillomavirus helicase DUF3305 PF11749.8 NODE_58400_length_287_cov_2.226190_g50461_i0forward_frame_1 - 0.057 13.5 1.5 0.07 13.2 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3305) Lamprin PF06403.11 NODE_58398_length_287_cov_2.285714_g50459_i0reverse_frame_1 - 0.0066 16.4 20.4 0.0075 16.2 13.0 2.8 1 1 1 2 2 2 1 Lamprin Chorion_1 PF01723.16 NODE_58398_length_287_cov_2.285714_g50459_i0reverse_frame_1 - 4.8 7.1 7.9 12 5.9 6.9 2.1 1 1 0 1 1 1 0 Chorion protein Lung_7-TM_R PF06814.13 NODE_58393_length_287_cov_2.388889_g50454_i0reverse_frame_1 - 0.036 13.3 9.1 0.041 13.1 9.1 1.0 1 0 0 1 1 1 0 Lung seven transmembrane receptor DUF1516 PF07457.11 NODE_58393_length_287_cov_2.388889_g50454_i0reverse_frame_1 - 0.085 13.1 7.5 0.028 14.6 2.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1516) Glucos_trans_II PF14264.6 NODE_58393_length_287_cov_2.388889_g50454_i0reverse_frame_1 - 0.091 12.1 9.5 0.42 9.9 9.5 1.9 1 1 0 1 1 1 0 Glucosyl transferase GtrII 7TM-7TMR_HD PF07698.11 NODE_58393_length_287_cov_2.388889_g50454_i0reverse_frame_1 - 0.1 12.4 8.9 0.19 11.5 8.9 1.4 1 1 0 1 1 1 0 7TM receptor with intracellular HD hydrolase FtsL PF04999.13 NODE_58393_length_287_cov_2.388889_g50454_i0reverse_frame_1 - 5.1 7.2 6.7 1.3 9.1 2.3 2.3 1 1 2 3 3 3 0 Cell division protein FtsL CGGC PF08821.11 NODE_58388_length_287_cov_2.515873_g50449_i0reverse_frame_1 - 0.073 13.3 1.3 0.092 12.9 1.2 1.3 1 1 0 1 1 1 0 CGGC domain zf-TRM13_CCCH PF11722.8 NODE_58387_length_287_cov_2.591270_g50448_i0reverse_frame_1 - 0.18 11.6 2.0 0.58 10.0 0.4 2.1 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein SSDP PF04503.13 NODE_58386_length_287_cov_2.607143_g50447_i0forward_frame_1 - 0.069 13.4 3.4 0.083 13.2 3.4 1.0 1 0 0 1 1 1 0 Single-stranded DNA binding protein, SSDP Herpes_UL95 PF03038.14 NODE_58379_length_287_cov_2.757937_g50440_i0reverse_frame_1 - 0.033 13.3 0.8 0.036 13.2 0.8 1.0 1 0 0 1 1 1 0 UL95 family ThuA PF06283.11 NODE_58379_length_287_cov_2.757937_g50440_i0forward_frame_1 - 0.16 12.2 0.1 0.17 12.0 0.1 1.1 1 0 0 1 1 1 0 Trehalose utilisation TMEM52 PF14979.6 NODE_58369_length_287_cov_3.865079_g50430_i0reverse_frame_1 - 3.2 7.7 6.5 9.8 6.1 0.6 2.1 2 0 0 2 2 2 0 Transmembrane 52 DUF4714 PF15833.5 NODE_58369_length_287_cov_3.865079_g50430_i0forward_frame_1 - 8.5 6.3 11.0 2.3 8.2 3.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4714) Preseq_ALAS PF09029.10 NODE_58367_length_287_cov_5.396825_g50428_i0reverse_frame_1 - 0.031 14.7 0.1 0.032 14.7 0.1 1.1 1 0 0 1 1 1 0 5-aminolevulinate synthase presequence zf-C2HCIx2C PF10782.9 NODE_58364_length_287_cov_9.853175_g50425_i0forward_frame_1 - 0.079 12.9 0.1 0.079 12.9 0.1 1.7 2 0 0 2 2 2 0 Zinc-finger Dcc1 PF09724.9 NODE_58362_length_287_cov_19.293651_g50423_i0reverse_frame_1 - 0.069 12.4 0.1 0.069 12.4 0.1 1.0 1 0 0 1 1 1 0 Sister chromatid cohesion protein Dcc1 AMPKBI PF04739.15 NODE_58356_length_287_cov_39.436508_g50417_i0reverse_frame_1 - 0.06 13.6 0.9 0.086 13.1 0.9 1.3 1 1 0 1 1 1 0 5'-AMP-activated protein kinase beta subunit, interaction domain Frag1 PF10277.9 NODE_58355_length_287_cov_41.337302_g50416_i0forward_frame_1 - 0.26 10.8 10.3 0.3 10.6 10.3 1.0 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family DAG_kinase_N PF14513.6 NODE_58355_length_287_cov_41.337302_g50416_i0forward_frame_1 - 0.27 11.4 1.9 0.32 11.2 1.9 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus PEGSRP PF07623.11 NODE_58348_length_287_cov_57.535714_g50409_i0forward_frame_1 - 0.016 15.0 0.2 0.036 13.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1584) DUF4577 PF15145.6 NODE_58341_length_287_cov_62.142857_g50402_i0reverse_frame_1 - 0.035 14.2 0.1 0.043 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) ODV-E18 PF10717.9 NODE_58341_length_287_cov_62.142857_g50402_i0reverse_frame_1 - 1.8 8.5 5.9 0.28 11.1 2.4 1.5 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 DUF4116 PF13475.6 NODE_58333_length_287_cov_73.059524_g50394_i0forward_frame_1 - 2.9e-10 39.7 0.0 1.3e-09 37.6 0.0 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4116) OAD_gamma PF04277.13 NODE_58329_length_287_cov_78.194444_g50390_i0reverse_frame_1 - 0.046 14.3 0.1 0.072 13.7 0.1 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain YhfC PF10086.9 NODE_58322_length_287_cov_92.119048_g50383_i0reverse_frame_1 - 0.18 11.1 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 YhfC intramembrane metalloprotease Yos1 PF08571.10 NODE_58317_length_287_cov_104.234127_g50378_i0reverse_frame_1 - 0.082 13.2 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Yos1-like HTH_31 PF13560.6 NODE_58311_length_287_cov_126.071429_g50372_i0forward_frame_1 - 0.059 13.7 0.0 0.088 13.2 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain zinc_ribbon_12 PF11331.8 NODE_58304_length_287_cov_162.710317_g50365_i0forward_frame_1 - 0.019 14.8 4.3 0.035 13.9 4.3 1.4 1 0 0 1 1 1 0 Probable zinc-ribbon domain Eapp_C PF10238.9 NODE_58304_length_287_cov_162.710317_g50365_i0forward_frame_1 - 3.2 7.8 5.9 3.2 7.8 4.9 1.4 1 1 0 1 1 1 0 E2F-associated phosphoprotein DUF4293 PF14126.6 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.00091 19.5 0.0 0.001 19.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4293) E1-E2_ATPase PF00122.20 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.008 15.7 0.7 0.01 15.4 0.7 1.1 1 0 0 1 1 1 1 E1-E2 ATPase Wzy_C PF04932.15 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.016 14.9 0.4 0.019 14.6 0.4 1.1 1 0 0 1 1 1 0 O-Antigen ligase Wzy_C_2 PF11846.8 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.025 14.5 0.5 0.03 14.2 0.5 1.1 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal DUF4131 PF13567.6 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.027 14.1 0.1 0.033 13.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Sprouty PF05210.13 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.033 14.6 0.0 0.037 14.4 0.0 1.2 1 0 0 1 1 1 0 Sprouty protein (Spry) FeoB_associated PF12669.7 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.07 13.5 1.1 6.7 7.2 0.1 2.2 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein NVEALA PF14055.6 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.092 12.7 0.2 0.34 10.9 0.0 1.8 2 0 0 2 2 2 0 NVEALA protein Herpes_LMP1 PF05297.11 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.13 11.5 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF3619 PF12279.8 NODE_58302_length_287_cov_175.539683_g50363_i0reverse_frame_1 - 0.19 12.1 1.0 3.8 7.9 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3619) zf_ZIC PF18366.1 NODE_58301_length_287_cov_180.841270_g50362_i0reverse_frame_1 - 0.096 12.8 0.2 0.18 12.0 0.2 1.5 1 0 0 1 1 1 0 Zic proteins zinc finger domain Inp1 PF12634.7 NODE_58300_length_287_cov_187.924603_g50361_i0reverse_frame_1 - 0.035 14.1 0.0 0.04 13.9 0.0 1.1 1 0 0 1 1 1 0 Inheritance of peroxisomes protein 1 TRAP_beta PF05753.14 NODE_58299_length_287_cov_194.293651_g50360_i0forward_frame_1 - 0.12 11.7 0.1 0.16 11.4 0.1 1.1 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) Neur_chan_memb PF02932.16 NODE_58284_length_288_cov_1.114625_g50345_i0forward_frame_1 - 0.079 13.0 0.9 0.09 12.8 0.9 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3783 PF12646.7 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.017 15.0 0.8 0.31 11.0 0.3 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF3783) USP7_ICP0_bdg PF12436.8 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.024 14.0 2.9 0.029 13.7 1.4 1.6 1 1 1 2 2 2 0 ICP0-binding domain of Ubiquitin-specific protease 7 FapA PF03961.13 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.083 11.5 9.0 0.1 11.2 9.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF5497 PF17601.2 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.16 12.3 5.4 0.11 12.9 2.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5497) Prominin PF05478.11 NODE_58278_length_288_cov_1.284585_g50339_i0reverse_frame_1 - 0.22 9.4 4.9 0.26 9.2 4.9 1.0 1 0 0 1 1 1 0 Prominin AAA_7 PF12775.7 NODE_58273_length_288_cov_1.371542_g50334_i0reverse_frame_1 - 8.8e-24 84.0 0.0 1e-23 83.8 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF1505 PF07403.11 NODE_58273_length_288_cov_1.371542_g50334_i0forward_frame_1 - 0.022 15.0 3.7 0.025 14.8 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) DUF1170 PF06663.13 NODE_58270_length_288_cov_1.446640_g50331_i0reverse_frame_1 - 0.028 14.1 0.1 0.046 13.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1170) DUF4119 PF13494.6 NODE_58270_length_288_cov_1.446640_g50331_i0reverse_frame_1 - 0.076 13.2 0.1 0.09 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF4119) Kelch_5 PF13854.6 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 1.6e-16 59.9 0.0 1e-09 38.2 0.0 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 1.3e-12 47.7 0.0 2.4e-08 34.1 0.0 2.8 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 1.3e-12 47.5 0.7 3.8e-08 33.2 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 5.1e-11 42.1 0.6 2e-09 37.1 0.1 2.2 2 0 0 2 2 2 1 Kelch motif Kelch_1 PF01344.25 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 1.1e-07 31.3 0.3 6.3e-06 25.7 0.0 2.1 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 NODE_58267_length_288_cov_1.509881_g50328_i0forward_frame_1 - 9.9e-07 28.8 0.6 2.3e-06 27.7 0.1 1.8 1 1 1 2 2 2 1 Kelch motif PRA1 PF03208.19 NODE_58257_length_288_cov_1.703557_g50318_i0forward_frame_1 - 0.32 10.6 7.5 0.34 10.6 7.5 1.2 1 1 0 1 1 1 0 PRA1 family protein Fiji_64_capsid PF05880.11 NODE_58254_length_288_cov_1.739130_g50315_i0reverse_frame_1 - 0.025 13.2 0.1 0.026 13.1 0.1 1.0 1 0 0 1 1 1 0 Fijivirus 64 kDa capsid protein Cu_bind_like PF02298.17 NODE_58254_length_288_cov_1.739130_g50315_i0reverse_frame_1 - 0.11 12.6 0.3 0.62 10.1 0.2 1.9 1 1 1 2 2 2 0 Plastocyanin-like domain WD40 PF00400.32 NODE_58248_length_288_cov_1.885375_g50309_i0forward_frame_1 - 0.0005 20.8 0.4 5.4 8.1 0.0 3.1 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_58248_length_288_cov_1.885375_g50309_i0forward_frame_1 - 0.0052 17.0 0.2 0.0066 16.7 0.2 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain CUTL PF16557.5 NODE_58247_length_288_cov_1.901186_g50308_i0forward_frame_1 - 0.065 13.4 2.0 0.09 13.0 2.0 1.3 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB DUF1265 PF06887.14 NODE_58245_length_288_cov_1.932806_g50306_i0forward_frame_1 - 0.093 12.7 0.2 0.13 12.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1265) DUF5549 PF17703.1 NODE_58244_length_288_cov_1.968379_g50305_i0reverse_frame_1 - 0.038 13.6 1.2 0.041 13.5 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) Ntox34 PF15606.6 NODE_58244_length_288_cov_1.968379_g50305_i0reverse_frame_1 - 0.11 12.6 1.8 0.19 11.9 1.8 1.4 1 0 0 1 1 1 0 Bacterial toxin 34 Topoisom_bac PF01131.20 NODE_58243_length_288_cov_1.968379_g50304_i0reverse_frame_1 - 1.3e-12 47.5 0.1 1.4e-12 47.4 0.1 1.0 1 0 0 1 1 1 1 DNA topoisomerase TssN PF17555.2 NODE_58240_length_288_cov_2.015810_g50301_i0reverse_frame_1 - 0.031 13.7 0.3 0.031 13.7 0.3 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF4661 PF15576.6 NODE_58238_length_288_cov_2.039526_g50299_i0forward_frame_1 - 3 7.7 4.9 0.71 9.7 0.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4661) DUF2417 PF10329.9 NODE_58224_length_288_cov_2.328063_g50285_i0reverse_frame_1 - 1.3 8.3 16.6 1.5 8.2 16.6 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) PRP1_N PF06424.12 NODE_58224_length_288_cov_2.328063_g50285_i0forward_frame_1 - 0.061 13.7 6.0 0.071 13.5 6.0 1.1 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal ATHILA PF03078.15 NODE_58224_length_288_cov_2.328063_g50285_i0forward_frame_1 - 0.31 9.8 4.4 0.35 9.6 4.4 1.0 1 0 0 1 1 1 0 ATHILA ORF-1 family zf-RanBP PF00641.18 NODE_58220_length_288_cov_2.482213_g50281_i0forward_frame_1 - 0.65 9.4 4.6 0.22 10.9 0.8 2.2 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others RALF PF05498.11 NODE_58208_length_288_cov_3.446640_g50269_i0forward_frame_1 - 0.062 14.3 4.3 0.12 13.3 4.2 1.6 1 1 0 1 1 1 0 Rapid ALkalinization Factor (RALF) Flu_B_M2 PF04772.12 NODE_58206_length_288_cov_3.976285_g50267_i0reverse_frame_1 - 0.18 12.1 1.4 0.46 10.8 1.3 1.7 1 1 0 1 1 1 0 Influenza B matrix protein 2 (BM2) PNTB_4TM PF12769.7 NODE_58205_length_288_cov_4.090909_g50266_i0forward_frame_1 - 1.8e-29 102.0 9.0 2.3e-29 101.7 9.0 1.2 1 0 0 1 1 1 1 4TM region of pyridine nucleotide transhydrogenase, mitoch DUF3392 PF11872.8 NODE_58205_length_288_cov_4.090909_g50266_i0forward_frame_1 - 0.0014 18.9 2.0 0.0025 18.0 2.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3392) DNApol3-delta_C PF09115.10 NODE_58203_length_288_cov_4.209486_g50264_i0reverse_frame_1 - 5e-25 88.3 0.1 5.5e-25 88.2 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase III, delta subunit, C terminal DUF4051 PF13260.6 NODE_58191_length_288_cov_53.498024_g50252_i0forward_frame_1 - 2.3 8.0 3.9 1.1 9.1 1.7 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) Adap_comp_sub PF00928.21 NODE_58189_length_288_cov_54.778656_g50250_i0reverse_frame_1 - 5.5 6.3 4.9 6 6.1 4.9 1.0 1 0 0 1 1 1 0 Adaptor complexes medium subunit family TMF_TATA_bd PF12325.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 7e-05 23.0 13.2 0.00012 22.3 12.8 1.6 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding FlxA PF14282.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.00049 20.0 13.3 0.019 14.9 3.5 2.0 1 1 1 2 2 2 2 FlxA-like protein GAS PF13851.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.00081 18.8 17.5 0.001 18.5 17.5 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding Takusan PF04822.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0024 17.7 14.6 0.016 15.1 0.6 3.3 1 1 2 3 3 3 1 Takusan APG6_N PF17675.1 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0031 18.0 10.7 0.0031 18.0 10.7 2.0 1 1 1 2 2 2 1 Apg6 coiled-coil region Seryl_tRNA_N PF02403.22 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0036 17.5 12.1 0.0036 17.5 12.1 1.4 1 1 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Filament PF00038.21 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0048 16.5 12.9 0.0063 16.1 12.9 1.2 1 0 0 1 1 1 1 Intermediate filament protein KASH_CCD PF14662.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.0096 15.8 18.2 0.014 15.3 18.2 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH CENP-F_leu_zip PF10473.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.011 15.8 20.1 0.49 10.4 5.3 2.4 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CALCOCO1 PF07888.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.011 14.6 15.1 0.012 14.5 15.1 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like ZapB PF06005.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.014 15.9 17.6 0.17 12.3 1.7 2.5 2 1 0 2 2 2 0 Cell division protein ZapB DUF4472 PF14739.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.016 15.9 13.3 0.16 12.7 4.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4472) BLOC1_2 PF10046.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.019 15.3 5.6 0.075 13.3 5.5 1.9 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HSBP1 PF06825.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.028 14.3 1.2 0.34 10.8 0.2 2.2 2 0 0 2 2 2 0 Heat shock factor binding protein 1 NPV_P10 PF05531.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.031 14.7 5.6 1.7 9.1 0.6 2.1 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein YabA PF06156.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.038 14.6 12.4 1.6 9.4 12.4 2.0 1 1 0 1 1 1 0 Initiation control protein YabA DivIC PF04977.15 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.04 13.7 16.9 0.3 10.9 7.1 2.4 1 1 1 2 2 2 0 Septum formation initiator Laminin_I PF06008.14 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.042 13.6 12.7 0.037 13.7 4.9 2.0 1 1 1 2 2 2 0 Laminin Domain I Cnn_1N PF07989.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.061 13.5 18.7 0.7 10.1 6.8 2.5 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Fungal_TACC PF12709.7 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.064 13.7 14.4 1.9 9.0 0.3 3.2 1 1 2 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins LPP PF04728.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.068 13.6 5.5 2.9 8.3 0.8 2.9 2 1 1 3 3 3 0 Lipoprotein leucine-zipper Pox_A_type_inc PF04508.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.089 12.7 11.9 1.7 8.6 0.2 3.8 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat KfrA_N PF11740.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.093 13.4 6.1 0.13 13.0 2.7 2.0 2 0 0 2 2 2 0 Plasmid replication region DNA-binding N-term Jnk-SapK_ap_N PF09744.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.097 12.9 17.6 0.11 12.7 17.6 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Phage_GP20 PF06810.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.11 12.3 18.0 1 9.1 18.0 2.0 1 1 0 1 1 1 0 Phage minor structural protein GP20 Spc7 PF08317.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.11 11.3 17.8 0.19 10.6 17.8 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein KELK PF15796.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.11 12.9 19.5 1.3 9.6 5.3 2.2 2 0 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase MCC-bdg_PDZ PF10506.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.11 12.5 2.2 0.36 10.9 0.2 2.3 2 1 1 3 3 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF3450 PF11932.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.12 11.7 10.1 0.43 9.8 10.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Golgin_A5 PF09787.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.12 11.8 14.6 0.13 11.7 14.6 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF724 PF05266.14 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.13 12.1 14.8 0.18 11.6 14.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Swi5 PF07061.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.13 12.4 13.3 0.17 12.0 3.1 2.1 2 0 0 2 2 2 0 Swi5 DUF4140 PF13600.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.14 12.6 11.4 1.7e+02 2.8 11.4 2.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Snapin_Pallidin PF14712.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.15 12.5 7.5 0.29 11.6 4.9 2.3 1 1 1 2 2 2 0 Snapin/Pallidin BRE1 PF08647.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.15 12.1 20.9 0.033 14.2 9.4 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase Fib_alpha PF08702.10 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.16 12.1 7.6 0.64 10.2 7.6 1.8 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Fzo_mitofusin PF04799.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.16 11.5 5.1 0.31 10.6 4.7 1.7 1 1 0 1 1 1 0 fzo-like conserved region BCAS2 PF05700.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.21 11.3 9.6 0.11 12.2 7.8 1.4 1 1 0 1 1 1 0 Breast carcinoma amplified sequence 2 (BCAS2) DUF1664 PF07889.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.22 11.6 7.4 0.091 12.8 4.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Fez1 PF06818.15 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.23 11.9 15.4 0.35 11.3 15.4 1.3 1 0 0 1 1 1 0 Fez1 DUF4201 PF13870.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.24 11.1 18.0 0.11 12.2 5.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) AAA_13 PF13166.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.24 10.0 15.4 0.7 8.5 15.4 1.6 1 1 0 1 1 1 0 AAA domain Csm1_N PF18504.1 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.33 11.3 16.8 2.9 8.3 5.7 2.9 1 1 2 3 3 3 0 Csm1 N-terminal domain TPR_MLP1_2 PF07926.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.34 11.0 15.8 0.4 10.7 12.3 2.1 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DegS PF05384.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.47 9.9 17.6 0.31 10.5 3.8 2.2 1 1 1 2 2 2 0 Sensor protein DegS CENP-H PF05837.12 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.49 10.8 12.6 1.5 9.3 12.6 1.7 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DUF948 PF06103.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.53 10.6 7.2 3.7 7.9 1.2 2.4 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) HIP1_clath_bdg PF16515.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.59 10.8 16.9 32 5.2 2.8 2.5 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ADIP PF11559.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.68 10.0 17.0 0.42 10.7 6.2 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding SKA2 PF16740.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.72 9.7 10.0 0.49 10.2 2.0 2.1 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 Rho_Binding PF08912.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.72 10.7 19.3 2.1 9.2 4.5 3.0 1 1 2 3 3 3 0 Rho Binding FlaC_arch PF05377.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.73 10.3 12.1 2.5 8.6 1.9 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Hanta_nucleocap PF00846.18 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.77 8.1 6.4 0.9 7.9 6.4 1.1 1 0 0 1 1 1 0 Hantavirus nucleocapsid protein PRKG1_interact PF15898.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.78 10.7 15.2 1.3 9.9 12.7 2.1 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Sec34 PF04136.15 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.78 9.6 7.1 0.24 11.3 1.6 1.9 1 1 1 2 2 2 0 Sec34-like family Ax_dynein_light PF10211.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.81 9.6 19.9 0.38 10.7 7.1 2.1 1 1 1 2 2 2 0 Axonemal dynein light chain Cep57_CLD_2 PF14197.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.84 9.8 18.1 0.97 9.6 11.1 3.0 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 TMPIT PF07851.13 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 0.86 8.8 10.3 1.1 8.5 10.3 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF812 PF05667.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.2 8.0 18.2 3.7 6.3 18.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF812) DUF1003 PF06210.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.2 9.3 5.0 1.6 8.9 0.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1003) DUF4407 PF14362.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.2 8.4 9.7 1.7 7.9 9.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Spc24 PF08286.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.3 9.3 14.8 0.8 10.0 5.5 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Atg14 PF10186.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 1.4 8.0 13.6 5.7 5.9 13.6 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 5_nucleotid PF05761.14 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 2 7.2 9.4 2.4 7.0 9.4 1.0 1 0 0 1 1 1 0 5' nucleotidase family UPF0242 PF06785.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 2.2 8.4 16.6 2.6 8.1 16.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Glyco_tran_28_C PF04101.16 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 2.2 8.2 8.0 2.4 8.1 0.9 2.0 2 0 0 2 2 2 0 Glycosyltransferase family 28 C-terminal domain bZIP_1 PF00170.21 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 2.9 8.1 18.7 4.3 7.5 6.8 2.6 2 1 0 2 2 2 0 bZIP transcription factor End3 PF12761.7 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 3.9 7.6 16.5 1.6 8.8 3.9 2.1 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 DUF1635 PF07795.11 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 3.9 7.3 10.3 17 5.2 10.3 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1635) Cluap1 PF10234.9 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 4.8 6.5 19.7 0.31 10.4 7.0 2.0 1 1 1 2 2 2 0 Clusterin-associated protein-1 Tho2 PF11262.8 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 5.5 6.1 16.7 0.19 10.9 5.6 2.0 1 1 1 2 2 2 0 Transcription factor/nuclear export subunit protein 2 JIP_LZII PF16471.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 7.2 6.9 17.9 2.6 8.3 7.4 2.5 1 1 2 3 3 3 0 JNK-interacting protein leucine zipper II V_ATPase_I PF01496.19 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 8.5 4.2 9.8 11 3.8 9.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family BST2 PF16716.5 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 8.5 7.0 13.6 1.7e+02 2.9 0.2 2.9 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Dzip-like_N PF13815.6 NODE_58189_length_288_cov_54.778656_g50250_i0forward_frame_1 - 8.6 6.4 12.7 1.7 8.6 4.1 2.1 2 0 0 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal DUF3873 PF12989.7 NODE_58187_length_288_cov_57.320158_g50248_i0forward_frame_1 - 0.073 13.4 2.0 0.08 13.3 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3873) PPV_E2_C PF00511.17 NODE_58183_length_288_cov_64.268775_g50244_i0reverse_frame_1 - 0.18 12.0 3.5 0.49 10.6 0.3 2.2 2 0 0 2 2 2 0 E2 (early) protein, C terminal SNF2_N PF00176.23 NODE_58181_length_288_cov_64.861660_g50242_i0reverse_frame_1 - 3e-16 59.1 0.1 3.1e-16 59.1 0.1 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 NODE_58181_length_288_cov_64.861660_g50242_i0reverse_frame_1 - 6.2e-05 23.1 0.0 6.7e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 NODE_58181_length_288_cov_64.861660_g50242_i0reverse_frame_1 - 7.7e-05 22.5 0.0 8.8e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 SWI2/SNF2 ATPase AAA_22 PF13401.6 NODE_58181_length_288_cov_64.861660_g50242_i0reverse_frame_1 - 0.072 13.4 0.0 0.083 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain aGPT-Pplase3 PF18746.1 NODE_58178_length_288_cov_71.533597_g50239_i0reverse_frame_1 - 0.0018 17.7 0.1 0.0021 17.4 0.1 1.1 1 0 0 1 1 1 1 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 CLZ PF16526.5 NODE_58178_length_288_cov_71.533597_g50239_i0reverse_frame_1 - 0.022 15.1 0.1 0.04 14.3 0.1 1.4 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4632 PF15451.6 NODE_58178_length_288_cov_71.533597_g50239_i0forward_frame_1 - 0.3 11.2 0.0 0.47 10.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4632) FANCI_S2 PF14676.6 NODE_58171_length_288_cov_88.454545_g50232_i0reverse_frame_1 - 0.047 14.0 0.1 0.056 13.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 2 p450 PF00067.22 NODE_58164_length_288_cov_137.968379_g50225_i0reverse_frame_1 - 0.019 13.7 0.0 0.03 13.1 0.0 1.3 1 0 0 1 1 1 0 Cytochrome P450 Frag1 PF10277.9 NODE_58156_length_288_cov_377.798419_g50217_i0reverse_frame_1 - 0.01 15.4 0.8 0.012 15.2 0.8 1.0 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family RecR PF02132.15 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_1 - 0.046 13.3 5.0 0.046 13.3 5.0 2.4 2 0 0 2 2 2 0 RecR protein PolC_DP2 PF03833.13 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_1 - 5.5 4.7 12.5 5.4 4.8 12.5 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 PspC PF04024.12 NODE_58155_length_288_cov_510.612648_g50216_i0forward_frame_1 - 1 9.2 5.9 26 4.7 0.4 3.3 3 0 0 3 3 3 0 PspC domain UPF0524 PF15823.5 NODE_58155_length_288_cov_510.612648_g50216_i0forward_frame_1 - 8.6 5.7 8.8 7.8 5.8 3.5 2.1 1 1 1 2 2 2 0 UPF0524 of C3orf70 7TM_GPCR_Srw PF10324.9 NODE_58154_length_288_cov_617.660079_g50215_i0forward_frame_1 - 0.078 12.2 1.0 0.093 12.0 1.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srw zf-C4 PF00105.18 NODE_58153_length_288_cov_653.304348_g50214_i0reverse_frame_1 - 0.041 14.3 1.7 3.1 8.3 0.1 2.1 2 0 0 2 2 2 0 Zinc finger, C4 type (two domains) zf-C4 PF00105.18 NODE_58152_length_288_cov_704.225296_g50213_i0reverse_frame_1 - 0.064 13.7 1.9 3.1 8.3 0.1 2.1 2 0 0 2 2 2 0 Zinc finger, C4 type (two domains) PIP49_N PF14875.6 NODE_58149_length_288_cov_46143.094862_g50210_i0reverse_frame_1 - 0.028 14.3 2.0 0.03 14.2 2.0 1.1 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 BT1 PF03092.16 NODE_58143_length_289_cov_1.251969_g50204_i0reverse_frame_2 - 0.08 11.2 0.6 0.085 11.1 0.6 1.0 1 0 0 1 1 1 0 BT1 family TTL PF03133.15 NODE_58143_length_289_cov_1.251969_g50204_i0forward_frame_2 - 0.035 13.2 3.4 0.043 12.9 3.4 1.0 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family Mit_proteolip PF08039.11 NODE_58143_length_289_cov_1.251969_g50204_i0forward_frame_2 - 0.08 13.4 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial proteolipid Adeno_PVIII PF01310.18 NODE_58142_length_289_cov_1.279528_g50203_i0reverse_frame_2 - 0.12 12.0 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Adenovirus hexon associated protein, protein VIII CCB1 PF12046.8 NODE_58141_length_289_cov_1.314961_g50202_i0reverse_frame_3 - 0.16 11.3 0.1 0.21 10.9 0.1 1.2 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B MICSWaP PF17018.5 NODE_58138_length_289_cov_1.413386_g50199_i0forward_frame_3 - 0.046 13.3 0.2 0.052 13.1 0.2 1.0 1 0 0 1 1 1 0 Spore wall protein HTH_46 PF15977.5 NODE_58136_length_289_cov_1.417323_g50197_i0reverse_frame_2 - 0.069 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding Prenyltrans PF00432.21 NODE_58134_length_289_cov_1.460630_g50195_i0reverse_frame_2 - 0.0051 16.5 0.3 1.7 8.5 0.3 2.2 2 0 0 2 2 2 2 Prenyltransferase and squalene oxidase repeat RVT_1 PF00078.27 NODE_58134_length_289_cov_1.460630_g50195_i0forward_frame_3 - 0.033 13.7 0.0 0.033 13.7 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Peptidase_U4 PF03419.13 NODE_58132_length_289_cov_1.507874_g50193_i0reverse_frame_2 - 0.34 10.1 7.2 0.37 10.0 7.2 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA FimA PF16970.5 NODE_58132_length_289_cov_1.507874_g50193_i0forward_frame_2 - 0.01 16.1 0.1 0.012 15.8 0.1 1.1 1 0 0 1 1 1 1 Type-1 fimbrial protein, A Herpes_ICP4_N PF03584.15 NODE_58132_length_289_cov_1.507874_g50193_i0forward_frame_2 - 0.014 15.2 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus ICP4-like protein N-terminal region DUF2985 PF11204.8 NODE_58131_length_289_cov_1.598425_g50192_i0reverse_frame_2 - 0.0027 17.8 0.2 0.0038 17.4 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2985) Nudix_N PF12535.8 NODE_58131_length_289_cov_1.598425_g50192_i0forward_frame_3 - 0.11 12.1 0.1 0.22 11.1 0.1 1.4 1 0 0 1 1 1 0 Hydrolase of X-linked nucleoside diphosphate N terminal ACP53EA PF06313.11 NODE_58130_length_289_cov_1.622047_g50191_i0forward_frame_3 - 0.024 14.8 2.0 0.083 13.1 0.6 2.0 1 1 1 2 2 2 0 Drosophila ACP53EA protein E1_4HB PF16191.5 NODE_58130_length_289_cov_1.622047_g50191_i0forward_frame_2 - 0.043 14.0 2.0 0.049 13.8 1.0 1.6 2 0 0 2 2 2 0 Ubiquitin-activating enzyme E1 four-helix bundle EBA-175_VI PF11556.8 NODE_58124_length_289_cov_1.732283_g50185_i0reverse_frame_3 - 0.2 12.0 9.6 0.43 10.9 9.6 1.7 1 1 0 1 1 1 0 Erythrocyte binding antigen 175 Mod_r PF07200.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.00028 21.0 9.8 0.00037 20.6 9.8 1.2 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein APG6_N PF17675.1 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.00083 19.9 10.9 0.001 19.6 10.9 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region DUF4164 PF13747.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0032 17.7 3.9 0.071 13.4 2.1 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4164) Matrilin_ccoil PF10393.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.006 16.4 2.6 0.12 12.2 0.0 2.7 2 1 0 2 2 2 1 Trimeric coiled-coil oligomerisation domain of matrilin UPF0242 PF06785.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0066 16.6 12.1 0.0075 16.4 12.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus PspA_IM30 PF04012.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0077 15.8 1.3 0.0077 15.8 1.3 1.7 1 1 0 1 1 1 1 PspA/IM30 family vATP-synt_E PF01991.18 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0083 15.6 4.2 0.01 15.2 4.2 1.1 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit FlaC_arch PF05377.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.009 16.4 10.9 0.013 15.9 1.5 2.3 1 1 1 2 2 2 1 Flagella accessory protein C (FlaC) Apolipoprotein PF01442.18 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.0092 15.9 4.9 0.011 15.6 4.9 1.1 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DNA_repr_REX1B PF14966.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.01 16.5 6.6 0.2 12.3 6.6 2.4 1 1 0 1 1 1 0 DNA repair REX1-B Cep57_CLD_2 PF14197.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.01 15.9 9.2 0.069 13.2 3.1 2.1 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 TACC_C PF05010.14 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.011 15.5 7.5 0.014 15.2 7.5 1.1 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal KxDL PF10241.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.013 15.7 3.4 0.021 15.1 3.4 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein DUF1664 PF07889.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.014 15.5 5.8 0.019 15.0 5.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Transcrip_act PF04949.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.018 14.9 4.6 0.023 14.6 4.6 1.2 1 0 0 1 1 1 0 Transcriptional activator SHE3 PF17078.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.021 14.6 12.7 0.044 13.5 12.5 1.5 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 Spc7 PF08317.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.025 13.5 9.1 0.029 13.3 9.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4407 PF14362.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.025 13.9 2.7 0.031 13.6 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3584 PF12128.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.026 12.1 7.1 0.028 11.9 7.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ABC_tran_CTD PF16326.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.028 14.7 5.7 0.16 12.2 5.3 2.0 1 1 1 2 2 2 0 ABC transporter C-terminal domain Laminin_II PF06009.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.029 14.4 6.0 0.075 13.0 6.0 1.6 1 1 0 1 1 1 0 Laminin Domain II TPR_MLP1_2 PF07926.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.037 14.1 2.3 0.037 14.1 2.3 2.0 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Rootletin PF15035.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.037 14.0 8.2 0.044 13.8 8.2 1.1 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion TMPIT PF07851.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.038 13.2 6.8 0.042 13.1 6.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein YlqD PF11068.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.04 14.3 6.3 0.049 14.0 6.3 1.1 1 0 0 1 1 1 0 YlqD protein CENP-F_leu_zip PF10473.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.041 13.9 11.3 0.064 13.3 11.3 1.3 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Effector_1 PF04518.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.042 12.9 4.7 0.042 12.9 4.7 1.0 1 0 0 1 1 1 0 Effector from type III secretion system COG6 PF06419.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.045 12.0 6.6 0.05 11.8 6.6 1.1 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 TMCO5 PF14992.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.048 13.2 8.4 0.057 13.0 8.4 1.0 1 0 0 1 1 1 0 TMCO5 family V_ATPase_I PF01496.19 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.051 11.5 7.1 0.055 11.4 7.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Exonuc_VII_L PF02601.15 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.052 13.1 4.4 0.06 12.9 4.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit YscO-like PF16789.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.059 13.4 6.2 0.09 12.8 6.1 1.4 1 1 0 1 1 1 0 YscO-like protein Sec34 PF04136.15 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.059 13.3 8.3 0.26 11.1 1.0 2.0 1 1 1 2 2 2 0 Sec34-like family WXG100 PF06013.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.073 13.3 1.3 1.4 9.2 1.3 2.3 1 1 0 1 1 1 0 Proteins of 100 residues with WXG HIP1_clath_bdg PF16515.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.088 13.4 7.6 0.85 10.3 7.3 2.0 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 ADIP PF11559.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.093 12.8 10.4 0.15 12.2 10.4 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding BLOC1_2 PF10046.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.093 13.0 7.7 0.17 12.2 7.6 1.5 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Mt_ATP_synt PF15704.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.097 12.6 4.8 0.65 9.9 4.6 1.9 1 1 0 1 1 1 0 Mitochondrial ATP synthase subunit DUF3810 PF12725.7 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.1 11.9 2.5 0.12 11.7 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF2730 PF10805.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.1 12.7 2.7 0.16 12.1 2.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) DUF745 PF05335.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.11 12.3 2.6 0.17 11.6 2.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF745) ISG65-75 PF11727.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.11 11.7 5.0 0.12 11.6 5.0 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein HMMR_N PF15905.5 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.13 11.7 11.8 0.17 11.3 11.8 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF489 PF04356.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.13 12.2 1.9 0.17 11.9 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) DIT1_PvcA PF05141.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.15 11.5 3.1 0.17 11.3 3.1 1.1 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein DUF4140 PF13600.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.15 12.5 4.3 8.6 6.9 0.1 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Lebercilin PF15619.6 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 11.6 11.5 3.2 7.4 0.9 1.9 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease TMF_DNA_bd PF12329.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 12.0 16.4 0.86 9.6 14.4 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF3847 PF12958.7 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 12.1 0.3 0.16 12.1 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3847) CENP-H PF05837.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 12.4 6.1 0.23 11.9 6.1 1.3 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Occludin_ELL PF07303.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.16 12.7 6.6 0.19 12.5 4.9 1.8 1 1 1 2 2 2 0 Occludin homology domain DUF1690 PF07956.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.18 12.3 8.1 0.19 12.1 8.1 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF3450 PF11932.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.2 10.9 8.8 0.63 9.3 8.8 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FapA PF03961.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.21 10.2 9.0 0.25 9.9 9.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Nup88 PF10168.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.25 9.1 8.7 0.29 8.9 8.7 1.0 1 0 0 1 1 1 0 Nuclear pore component 5_nucleotid PF05761.14 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.25 10.2 4.7 0.27 10.1 4.7 1.0 1 0 0 1 1 1 0 5' nucleotidase family OmpH PF03938.14 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.27 11.6 7.4 0.72 10.2 7.4 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Prominin PF05478.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.27 9.1 5.2 0.32 8.9 5.2 1.0 1 0 0 1 1 1 0 Prominin UPF0184 PF03670.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.29 11.5 5.2 0.33 11.4 4.1 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) DUF948 PF06103.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.31 11.3 3.6 2.4 8.5 0.1 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Prefoldin PF02996.17 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.39 10.6 8.7 0.41 10.6 3.0 2.5 1 1 2 3 3 3 0 Prefoldin subunit DUF724 PF05266.14 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.45 10.3 7.2 1.2 8.9 7.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF724) NPV_P10 PF05531.12 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.47 11.0 5.6 4 8.0 2.0 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein FAP206 PF12018.8 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.51 9.8 5.4 0.58 9.6 5.4 1.0 1 0 0 1 1 1 0 Domain of unknown function Prefoldin_2 PF01920.20 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.55 10.2 12.8 1.2 9.1 2.3 2.3 1 1 2 3 3 3 0 Prefoldin subunit FemAB PF02388.16 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.64 8.8 5.5 0.75 8.6 5.5 1.1 1 0 0 1 1 1 0 FemAB family Spc24 PF08286.11 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 0.88 9.8 9.7 0.27 11.5 3.8 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 HR1 PF02185.16 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 2.4 8.3 12.4 14 5.9 2.3 2.3 1 1 1 2 2 2 0 Hr1 repeat DASH_Dam1 PF08653.10 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 2.5 8.0 4.5 9.7 6.1 1.4 2.2 1 1 1 2 2 2 0 DASH complex subunit Dam1 XhlA PF10779.9 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 2.5 8.4 11.8 1.7 8.9 8.3 2.0 1 1 0 2 2 2 0 Haemolysin XhlA Fzo_mitofusin PF04799.13 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 3.3 7.2 7.5 2.1 7.9 2.8 1.9 1 1 1 2 2 2 0 fzo-like conserved region bZIP_1 PF00170.21 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 3.6 7.8 12.2 1.8 8.7 4.4 2.3 1 1 1 2 2 2 0 bZIP transcription factor LMBR1 PF04791.16 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 3.6 6.4 6.2 4.2 6.2 6.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein EMP24_GP25L PF01105.24 NODE_58122_length_289_cov_1.846457_g50183_i0reverse_frame_2 - 8.7 6.2 10.6 4.4 7.2 3.7 2.0 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD TMEM192 PF14802.6 NODE_58121_length_289_cov_1.881890_g50182_i0forward_frame_3 - 0.051 12.7 0.7 0.062 12.4 0.7 1.2 1 0 0 1 1 1 0 TMEM192 family T7SS_ESX1_EccB PF05108.13 NODE_58108_length_289_cov_2.110236_g50169_i0reverse_frame_3 - 0.033 12.9 0.5 0.038 12.7 0.5 1.1 1 0 0 1 1 1 0 Type VII secretion system ESX-1, transport TM domain B Pns11_12 PF17464.2 NODE_58107_length_289_cov_2.114173_g50168_i0forward_frame_3 - 0.16 11.6 0.1 0.2 11.4 0.1 1.1 1 0 0 1 1 1 0 Non-structural protein 11 and 12 MFS_1 PF07690.16 NODE_58106_length_289_cov_2.125984_g50167_i0forward_frame_3 - 1.5e-05 24.1 9.6 1.5e-05 24.1 9.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3624 PF12292.8 NODE_58106_length_289_cov_2.125984_g50167_i0forward_frame_3 - 1.1 9.7 4.8 1.3 9.4 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3624) zf-FLZ PF04570.14 NODE_58106_length_289_cov_2.125984_g50167_i0forward_frame_2 - 0.02 14.4 0.3 0.039 13.4 0.3 1.5 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 YfhO PF09586.10 NODE_58105_length_289_cov_2.141732_g50166_i0reverse_frame_3 - 0.19 9.9 2.3 0.19 9.9 2.3 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF2244 PF10003.9 NODE_58105_length_289_cov_2.141732_g50166_i0reverse_frame_2 - 2.4 7.8 6.8 2.8 7.6 6.8 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) zf-RING_5 PF14634.6 NODE_58103_length_289_cov_2.157480_g50164_i0reverse_frame_2 - 0.018 15.0 0.7 0.018 15.0 0.7 1.9 2 0 0 2 2 2 0 zinc-RING finger domain Fer2 PF00111.27 NODE_58103_length_289_cov_2.157480_g50164_i0reverse_frame_2 - 0.1 12.6 5.8 2.2 8.3 1.9 2.1 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain CD34_antigen PF06365.12 NODE_58098_length_289_cov_2.291339_g50159_i0reverse_frame_2 - 0.099 12.2 0.2 0.12 11.9 0.2 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family Glyco_hydro_114 PF03537.13 NODE_58096_length_289_cov_2.314961_g50157_i0reverse_frame_3 - 0.031 13.6 0.1 0.035 13.4 0.1 1.2 1 0 0 1 1 1 0 Glycoside-hydrolase family GH114 TTC5_OB PF16669.5 NODE_58096_length_289_cov_2.314961_g50157_i0forward_frame_3 - 0.11 12.2 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat protein 5 OB fold domain MICSWaP PF17018.5 NODE_58094_length_289_cov_2.362205_g50155_i0reverse_frame_2 - 0.0047 16.5 0.2 0.0057 16.2 0.2 1.1 1 0 0 1 1 1 1 Spore wall protein Asp PF00026.23 NODE_58087_length_289_cov_2.476378_g50148_i0forward_frame_3 - 4.1e-19 69.2 1.1 4.5e-19 69.0 1.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_58087_length_289_cov_2.476378_g50148_i0forward_frame_3 - 7.3e-07 29.6 0.0 8.9e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal zf-CCCH PF00642.24 NODE_58084_length_289_cov_2.559055_g50145_i0reverse_frame_3 - 0.019 14.9 3.1 0.049 13.6 3.1 1.7 1 1 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_3 PF15663.5 NODE_58084_length_289_cov_2.559055_g50145_i0reverse_frame_3 - 0.076 13.2 4.0 1.8 8.8 0.7 2.1 1 1 1 2 2 2 0 Zinc-finger containing family Peptidase_S29 PF02907.15 NODE_58084_length_289_cov_2.559055_g50145_i0forward_frame_3 - 0.15 11.8 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease 4HPAD_g_N PF18671.1 NODE_58083_length_289_cov_2.566929_g50144_i0forward_frame_3 - 0.14 11.9 0.1 0.34 10.7 0.1 1.7 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal GP88 PF17338.2 NODE_58078_length_289_cov_2.751969_g50139_i0reverse_frame_2 - 0.12 11.8 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Gene product 88 HAD_SAK_2 PF18143.1 NODE_58078_length_289_cov_2.751969_g50139_i0forward_frame_3 - 0.12 12.6 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 HAD domain in Swiss Army Knife RNA repair proteins SBP_bac_3 PF00497.20 NODE_58078_length_289_cov_2.751969_g50139_i0forward_frame_2 - 2.5e-29 102.3 0.0 2.9e-29 102.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 NODE_58078_length_289_cov_2.751969_g50139_i0forward_frame_2 - 2.8e-06 27.5 0.0 0.00021 21.5 0.0 2.0 1 1 0 1 1 1 1 Ligated ion channel L-glutamate- and glycine-binding site RICTOR_V PF14668.6 NODE_58074_length_289_cov_2.929134_g50135_i0reverse_frame_3 - 0.68 10.2 4.3 0.29 11.4 1.0 2.0 2 1 1 3 3 3 0 Rapamycin-insensitive companion of mTOR, domain 5 Adeno_IVa2 PF02456.15 NODE_58074_length_289_cov_2.929134_g50135_i0reverse_frame_2 - 0.0011 17.9 0.9 0.0011 17.9 0.9 1.1 1 0 0 1 1 1 1 Adenovirus IVa2 protein DUF294 PF03445.13 NODE_58073_length_289_cov_2.964567_g50134_i0forward_frame_2 - 0.09 12.6 0.6 0.12 12.2 0.6 1.3 1 1 0 1 1 1 0 Putative nucleotidyltransferase DUF294 Yip1 PF04893.17 NODE_58070_length_289_cov_3.015748_g50131_i0reverse_frame_2 - 0.021 14.5 1.7 0.027 14.2 1.7 1.1 1 0 0 1 1 1 0 Yip1 domain Iso_dh PF00180.20 NODE_58069_length_289_cov_3.082677_g50130_i0reverse_frame_2 - 9.1e-24 84.2 0.0 1e-23 84.0 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase KAR9 PF08580.10 NODE_58066_length_289_cov_3.417323_g50127_i0reverse_frame_3 - 0.0012 17.6 0.2 0.0012 17.5 0.2 1.0 1 0 0 1 1 1 1 Yeast cortical protein KAR9 DUF5472 PF17566.2 NODE_58063_length_289_cov_4.003937_g50124_i0reverse_frame_3 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) Lambda_Kil PF06301.11 NODE_58060_length_289_cov_11.074803_g50121_i0forward_frame_3 - 0.055 13.1 0.0 0.085 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage lambda Kil protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks277.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks277.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks277.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks277.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:15:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF818 PF05677.12 NODE_58058_length_289_cov_22.452756_g50119_i0reverse_frame_3 - 0.14 11.1 3.4 0.15 11.0 3.4 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) DUF3298 PF11738.8 NODE_58057_length_289_cov_23.523622_g50118_i0reverse_frame_3 - 3 8.9 6.2 0.93 10.6 1.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3298) FHIPEP PF00771.20 NODE_58056_length_289_cov_28.098425_g50117_i0reverse_frame_2 - 0.17 10.3 0.5 0.18 10.2 0.5 1.0 1 0 0 1 1 1 0 FHIPEP family CTC1_2 PF15491.6 NODE_58056_length_289_cov_28.098425_g50117_i0forward_frame_3 - 0.039 13.3 1.6 0.045 13.0 1.6 1.0 1 0 0 1 1 1 0 CST, telomere maintenance, complex subunit CTC1 NIF PF03031.18 NODE_58054_length_289_cov_38.023622_g50115_i0reverse_frame_2 - 0.028 14.2 1.5 0.034 13.9 1.5 1.2 1 1 0 1 1 1 0 NLI interacting factor-like phosphatase Pkinase PF00069.25 NODE_58051_length_289_cov_45.996063_g50112_i0forward_frame_2 - 0.012 15.0 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein kinase domain Dickkopf_N PF04706.12 NODE_58049_length_289_cov_49.496063_g50110_i0reverse_frame_2 - 0.027 15.0 1.5 6.7 7.3 0.1 2.3 2 1 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region NBD94 PF16830.5 NODE_58046_length_289_cov_57.283465_g50107_i0forward_frame_2 - 0.05 14.0 1.2 0.064 13.7 0.2 1.6 2 0 0 2 2 2 0 Nucleotide-Binding Domain 94 of RH RFC1 PF08519.12 NODE_58046_length_289_cov_57.283465_g50107_i0forward_frame_2 - 0.071 13.3 0.1 0.12 12.6 0.1 1.4 1 1 0 1 1 1 0 Replication factor RFC1 C terminal domain DnaB_2 PF07261.11 NODE_58046_length_289_cov_57.283465_g50107_i0forward_frame_2 - 0.54 10.0 2.8 3.5 7.4 0.1 2.4 1 1 2 3 3 3 0 Replication initiation and membrane attachment Ank_2 PF12796.7 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 2.9e-09 37.4 0.0 5e-09 36.6 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 9.9e-09 35.6 0.0 0.00076 20.0 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 2.2e-06 27.5 0.0 0.0013 19.0 0.0 2.9 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 0.0012 19.1 0.0 0.005 17.1 0.0 2.0 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_58045_length_289_cov_57.511811_g50106_i0forward_frame_3 - 0.0033 17.8 0.0 0.037 14.5 0.0 2.3 2 1 1 3 3 3 1 Ankyrin repeat UCR_hinge PF02320.16 NODE_58043_length_289_cov_59.972441_g50104_i0reverse_frame_2 - 0.0077 16.4 0.0 0.013 15.7 0.0 1.4 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein Peptidase_M99_C PF17129.4 NODE_58043_length_289_cov_59.972441_g50104_i0reverse_frame_2 - 0.064 13.5 0.0 0.58 10.4 0.0 1.9 1 1 1 2 2 2 0 C-terminal domain of metallo-carboxypeptidase MVP_shoulder PF11978.8 NODE_58041_length_289_cov_61.039370_g50102_i0reverse_frame_3 - 0.0046 17.0 0.0 0.0051 16.8 0.0 1.2 1 0 0 1 1 1 1 Shoulder domain DUF4791 PF16039.5 NODE_58038_length_289_cov_68.240157_g50099_i0reverse_frame_3 - 0.018 14.6 0.0 0.021 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4791) Ank_2 PF12796.7 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.0003 21.3 0.0 0.00039 21.0 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.0018 18.6 0.1 0.0066 16.9 0.0 1.9 2 0 0 2 2 2 1 Ankyrin repeat TetR_C_20 PF17925.1 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.022 15.1 0.1 0.029 14.7 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Ank PF00023.30 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.024 15.1 0.2 0.11 13.0 0.0 1.9 2 0 0 2 2 2 0 Ankyrin repeat Ank_5 PF13857.6 NODE_58035_length_289_cov_70.374016_g50096_i0reverse_frame_3 - 0.028 14.8 0.1 0.057 13.8 0.1 1.7 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Herpes_heli_pri PF05774.11 NODE_58029_length_289_cov_76.582677_g50090_i0reverse_frame_3 - 0.012 15.9 0.9 0.014 15.6 0.9 1.1 1 0 0 1 1 1 0 Herpesvirus helicase-primase complex component C1_2 PF03107.16 NODE_58029_length_289_cov_76.582677_g50090_i0forward_frame_3 - 0.22 11.9 8.8 0.13 12.6 3.9 2.3 2 0 0 2 2 2 0 C1 domain ABC_tran PF00005.27 NODE_58024_length_289_cov_86.791339_g50085_i0forward_frame_3 - 2.1e-06 28.3 0.0 4.1e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_58024_length_289_cov_86.791339_g50085_i0forward_frame_3 - 0.00011 22.2 0.1 0.00014 21.8 0.1 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system TniB PF05621.11 NODE_58024_length_289_cov_86.791339_g50085_i0forward_frame_3 - 0.0068 15.8 0.0 0.0084 15.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein SMC_N PF02463.19 NODE_58024_length_289_cov_86.791339_g50085_i0forward_frame_3 - 0.13 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Prenyltrans PF00432.21 NODE_58021_length_289_cov_90.177165_g50082_i0reverse_frame_3 - 5e-08 32.5 0.0 0.0036 17.0 0.1 2.2 2 0 0 2 2 2 2 Prenyltransferase and squalene oxidase repeat IL1 PF00340.19 NODE_58018_length_289_cov_116.362205_g50079_i0reverse_frame_2 - 0.054 13.2 0.5 0.094 12.4 0.1 1.6 2 0 0 2 2 2 0 Interleukin-1 / 18 YecM PF06185.12 NODE_58015_length_289_cov_156.775591_g50076_i0forward_frame_3 - 0.061 13.0 0.0 0.071 12.8 0.0 1.1 1 0 0 1 1 1 0 YecM protein PHY PF00360.20 NODE_58014_length_289_cov_257.799213_g50075_i0reverse_frame_2 - 0.086 12.1 1.3 0.12 11.7 1.3 1.3 1 0 0 1 1 1 0 Phytochrome region CytB6-F_Fe-S PF08802.10 NODE_58014_length_289_cov_257.799213_g50075_i0forward_frame_3 - 7.3e-06 25.9 5.5 2.7e-05 24.1 0.2 2.7 3 0 0 3 3 3 2 Cytochrome B6-F complex Fe-S subunit Gag_p10 PF02337.17 NODE_58014_length_289_cov_257.799213_g50075_i0forward_frame_2 - 0.13 12.3 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Retroviral GAG p10 protein PALP PF00291.25 NODE_58013_length_289_cov_258.354331_g50074_i0reverse_frame_3 - 2.1e-06 27.4 0.0 2.5e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF5543 PF17697.1 NODE_58011_length_289_cov_740.204724_g50072_i0reverse_frame_2 - 0.028 14.7 5.5 0.032 14.5 5.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5543) Melittin PF01372.17 NODE_58008_length_289_cov_1999.578740_g50069_i0reverse_frame_2 - 4.2 7.5 5.5 11 6.2 0.5 2.4 2 0 0 2 2 2 0 Melittin Apq12 PF12716.7 NODE_58006_length_290_cov_1.098039_g50067_i0reverse_frame_2 - 2.5 8.1 9.5 4.6 7.3 9.5 1.4 1 0 0 1 1 1 0 Nuclear pore assembly and biogenesis YjeF_N PF03853.15 NODE_58006_length_290_cov_1.098039_g50067_i0forward_frame_3 - 1e-06 28.8 0.0 1.4e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 YjeF-related protein N-terminus cNMP_binding PF00027.29 NODE_58005_length_290_cov_1.105882_g50066_i0forward_frame_3 - 8.8e-05 22.5 0.0 0.00012 22.1 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain MarR PF01047.22 NODE_58004_length_290_cov_1.152941_g50065_i0reverse_frame_3 - 1.3 9.1 12.1 2.6 8.1 0.1 3.9 4 0 0 4 4 4 0 MarR family HRDC PF00570.23 NODE_58004_length_290_cov_1.152941_g50065_i0reverse_frame_3 - 2.5 8.1 7.1 13 5.8 0.9 2.5 2 0 0 2 2 2 0 HRDC domain DUF5088 PF17008.5 NODE_58003_length_290_cov_1.156863_g50064_i0reverse_frame_2 - 0.0088 15.8 0.1 0.01 15.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5088) FYVE_2 PF02318.16 NODE_58003_length_290_cov_1.156863_g50064_i0forward_frame_3 - 0.11 12.7 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 FYVE-type zinc finger CHZ PF09649.10 NODE_58002_length_290_cov_1.196078_g50063_i0forward_frame_3 - 8.1 6.0 0.0 8.1 6.0 0.0 3.1 4 0 0 4 4 4 0 Histone chaperone domain CHZ DUF543 PF04418.12 NODE_58002_length_290_cov_1.196078_g50063_i0forward_frame_2 - 1.2 9.2 4.8 9.2 6.3 1.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF543) zf-C2HCIx2C PF10782.9 NODE_58001_length_290_cov_1.223529_g50062_i0forward_frame_2 - 0.096 12.6 0.4 0.14 12.1 0.4 1.3 1 0 0 1 1 1 0 Zinc-finger MFS_1 PF07690.16 NODE_58000_length_290_cov_1.239216_g50061_i0reverse_frame_2 - 0.00048 19.1 1.5 0.00053 19.0 1.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily BA14K PF07886.11 NODE_57998_length_290_cov_1.254902_g50059_i0reverse_frame_2 - 0.024 14.5 1.0 0.051 13.5 1.0 1.6 1 0 0 1 1 1 0 BA14K-like protein ING PF12998.7 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_2 - 0.036 14.7 0.9 0.044 14.4 0.9 1.1 1 0 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding HydF_tetramer PF18133.1 NODE_57993_length_290_cov_1.435294_g50054_i0forward_frame_2 - 0.22 11.3 4.8 0.72 9.6 0.1 2.0 1 1 1 2 2 2 0 Hydrogen maturase F tetramerization domain NAD_binding_6 PF08030.12 NODE_57989_length_290_cov_1.533333_g50050_i0reverse_frame_3 - 0.14 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Ferric reductase NAD binding domain DUF1221 PF06760.11 NODE_57989_length_290_cov_1.533333_g50050_i0reverse_frame_2 - 0.073 12.6 0.1 0.092 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1221) EH_Signature PF15611.6 NODE_57989_length_290_cov_1.533333_g50050_i0forward_frame_3 - 0.039 13.4 0.0 0.041 13.3 0.0 1.1 1 0 0 1 1 1 0 EH_Signature domain HEAT PF02985.22 NODE_57989_length_290_cov_1.533333_g50050_i0forward_frame_3 - 0.06 13.6 0.0 0.54 10.7 0.0 2.2 2 0 0 2 2 2 0 HEAT repeat Tobravirus_2B PF05271.11 NODE_57987_length_290_cov_1.666667_g50048_i0forward_frame_3 - 0.023 14.6 0.2 0.025 14.5 0.2 1.2 1 0 0 1 1 1 0 Tobravirus 2B protein RuvC_III PF18541.1 NODE_57986_length_290_cov_1.674510_g50047_i0reverse_frame_3 - 0.016 15.1 0.5 0.27 11.1 0.5 2.0 1 1 0 1 1 1 0 RuvC endonuclease subdomain 3 AT_hook PF02178.19 NODE_57981_length_290_cov_1.756863_g50042_i0forward_frame_3 - 0.02 14.7 2.1 0.02 14.7 0.1 2.2 2 0 0 2 2 2 0 AT hook motif zf-C3HC4_2 PF13923.6 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_3 - 0.02 14.7 3.0 0.02 14.7 3.0 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_3 - 0.029 14.7 2.8 0.029 14.7 2.8 1.6 2 0 0 2 2 2 0 Ring finger domain Symplekin_C PF12295.8 NODE_57980_length_290_cov_1.788235_g50041_i0reverse_frame_2 - 0.032 14.3 0.1 0.043 13.9 0.1 1.3 1 1 0 1 1 1 0 Symplekin tight junction protein C terminal MetOD2 PF18548.1 NODE_57979_length_290_cov_1.792157_g50040_i0forward_frame_3 - 0.18 11.9 0.0 0.24 11.5 0.0 1.2 1 0 0 1 1 1 0 Metanogen output domain 2 DUF726 PF05277.12 NODE_57978_length_290_cov_1.800000_g50039_i0reverse_frame_3 - 1.3 7.9 4.4 1.4 7.8 4.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Ank PF00023.30 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 6.4e-13 48.5 0.0 4.7e-09 36.3 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 2.3e-12 47.3 0.2 3.2e-12 46.9 0.2 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 3.1e-12 46.8 0.4 5.4e-07 30.0 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 1.4e-11 43.6 0.1 3.7e-07 29.9 0.1 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 NODE_57974_length_290_cov_1.870588_g50035_i0reverse_frame_3 - 2.4e-09 37.2 0.2 4.8e-09 36.3 0.2 1.5 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Cue1_U7BR PF18499.1 NODE_57972_length_290_cov_1.956863_g50033_i0reverse_frame_2 - 0.006 16.6 0.0 0.0096 15.9 0.0 1.3 1 0 0 1 1 1 1 Ubc7p-binding region of Cue1 GPHR_N PF12537.8 NODE_57972_length_290_cov_1.956863_g50033_i0forward_frame_3 - 0.034 14.2 0.0 0.055 13.6 0.0 1.4 1 0 0 1 1 1 0 The Golgi pH Regulator (GPHR) Family N-terminal Kp4 PF09044.10 NODE_57970_length_290_cov_1.964706_g50031_i0reverse_frame_3 - 0.1 12.7 0.2 0.16 12.1 0.2 1.2 1 1 0 1 1 1 0 Kp4 Wzz PF02706.15 NODE_57963_length_290_cov_2.227451_g50024_i0reverse_frame_3 - 0.094 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Chain length determinant protein MBD PF01429.19 NODE_57963_length_290_cov_2.227451_g50024_i0forward_frame_3 - 0.13 12.0 0.1 0.14 11.9 0.1 1.2 1 0 0 1 1 1 0 Methyl-CpG binding domain Pns11_12 PF17464.2 NODE_57962_length_290_cov_2.329412_g50023_i0forward_frame_3 - 0.57 9.9 10.7 0.68 9.6 10.7 1.1 1 0 0 1 1 1 0 Non-structural protein 11 and 12 MDFI PF15316.6 NODE_57962_length_290_cov_2.329412_g50023_i0forward_frame_3 - 4.8 7.3 8.3 5.4 7.1 8.3 1.1 1 0 0 1 1 1 0 MyoD family inhibitor Poty_coat PF00767.18 NODE_57961_length_290_cov_2.388235_g50022_i0reverse_frame_3 - 0.091 12.3 0.1 0.091 12.3 0.1 1.2 1 0 0 1 1 1 0 Potyvirus coat protein PCO_ADO PF07847.12 NODE_57958_length_290_cov_2.427451_g50019_i0reverse_frame_2 - 6.3e-08 32.3 0.0 8.2e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 PCO_ADO ADH_zinc_N PF00107.26 NODE_57952_length_290_cov_2.776471_g50013_i0reverse_frame_2 - 8.3e-12 45.2 0.0 1e-11 44.9 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase SecD_SecF PF02355.16 NODE_57952_length_290_cov_2.776471_g50013_i0reverse_frame_2 - 0.22 10.9 0.1 0.89 8.9 0.0 1.8 2 0 0 2 2 2 0 Protein export membrane protein AP_endonuc_2 PF01261.24 NODE_57949_length_290_cov_3.137255_g50010_i0reverse_frame_3 - 4.7e-11 42.5 0.1 6e-11 42.2 0.1 1.0 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF4077 PF13295.6 NODE_57948_length_290_cov_3.250980_g50009_i0reverse_frame_2 - 0.028 14.4 0.3 0.028 14.3 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) DUF5381 PF17353.2 NODE_57948_length_290_cov_3.250980_g50009_i0forward_frame_3 - 0.34 10.6 4.5 0.37 10.5 4.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Cullin PF00888.22 NODE_57946_length_290_cov_3.384314_g50007_i0forward_frame_2 - 0.009 14.7 0.3 0.009 14.7 0.3 1.0 1 0 0 1 1 1 1 Cullin family UPF0029 PF01205.19 NODE_57942_length_290_cov_3.560784_g50003_i0reverse_frame_3 - 3.8e-15 56.1 0.1 4.7e-15 55.8 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 zf-NF-X1 PF01422.17 NODE_57942_length_290_cov_3.560784_g50003_i0forward_frame_3 - 0.32 11.1 3.6 0.8 9.8 3.6 1.6 1 0 0 1 1 1 0 NF-X1 type zinc finger MatE PF01554.18 NODE_57941_length_290_cov_3.952941_g50002_i0reverse_frame_2 - 0.0039 16.9 0.6 0.0039 16.9 0.6 1.6 2 0 0 2 2 2 1 MatE DUF2256 PF10013.9 NODE_57937_length_290_cov_7.564706_g49998_i0reverse_frame_3 - 1.7 8.8 0.0 1.7 8.8 0.0 3.8 4 1 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2256) NIR_SIR_ferr PF03460.17 NODE_57937_length_290_cov_7.564706_g49998_i0reverse_frame_2 - 0.038 13.9 0.1 0.09 12.6 0.1 1.7 1 1 0 1 1 1 0 Nitrite/Sulfite reductase ferredoxin-like half domain DUF4734 PF15881.5 NODE_57935_length_290_cov_19.721569_g49996_i0reverse_frame_3 - 0.015 15.5 1.7 0.02 15.1 1.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4734) ORMDL PF04061.14 NODE_57933_length_290_cov_34.274510_g49994_i0reverse_frame_2 - 0.026 14.4 1.8 0.027 14.3 0.8 1.5 1 1 0 1 1 1 0 ORMDL family Telomerase_RBD PF12009.8 NODE_57932_length_290_cov_37.211765_g49993_i0reverse_frame_3 - 0.11 12.6 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Telomerase ribonucleoprotein complex - RNA binding domain DUF679 PF05078.12 NODE_57929_length_290_cov_41.349020_g49990_i0reverse_frame_3 - 0.11 12.4 2.6 0.13 12.2 2.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF679) ATG16 PF08614.11 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.0019 18.4 3.0 0.0025 18.1 3.0 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF5082 PF16888.5 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.0045 17.3 1.0 0.0056 17.0 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) HIP1_clath_bdg PF16515.5 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.014 16.0 1.8 0.018 15.6 1.8 1.2 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF641 PF04859.12 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.031 14.6 2.1 0.045 14.1 2.1 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF948 PF06103.11 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.04 14.2 0.5 0.055 13.7 0.5 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF4407 PF14362.6 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.1 11.9 0.3 0.11 11.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 NODE_57928_length_290_cov_44.270588_g49989_i0reverse_frame_3 - 0.13 12.9 0.5 0.19 12.4 0.5 1.2 1 0 0 1 1 1 0 SlyX DUF5494 PF17598.2 NODE_57925_length_290_cov_48.796078_g49986_i0reverse_frame_3 - 0.072 13.2 2.3 0.082 13.0 2.0 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5494) ArsD PF06953.11 NODE_57925_length_290_cov_48.796078_g49986_i0reverse_frame_2 - 0.019 15.3 0.0 0.021 15.1 0.0 1.1 1 0 0 1 1 1 0 Arsenical resistance operon trans-acting repressor ArsD RCDG1 PF15725.5 NODE_57923_length_290_cov_59.011765_g49984_i0forward_frame_2 - 0.042 14.3 2.2 0.071 13.5 2.2 1.4 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein Dickkopf_N PF04706.12 NODE_57921_length_290_cov_70.988235_g49982_i0forward_frame_2 - 2.1 8.9 12.1 3.6 8.2 12.1 1.4 1 1 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region Arm_3 PF16186.5 NODE_57919_length_290_cov_72.078431_g49980_i0forward_frame_3 - 1.5e-05 24.4 1.0 2.2e-05 23.9 1.0 1.2 1 0 0 1 1 1 1 Atypical Arm repeat GLE1 PF07817.13 NODE_57918_length_290_cov_72.219608_g49979_i0forward_frame_2 - 0.026 13.8 0.0 0.031 13.5 0.0 1.0 1 0 0 1 1 1 0 GLE1-like protein DUF1286 PF06939.11 NODE_57917_length_290_cov_73.627451_g49978_i0reverse_frame_3 - 0.02 15.1 2.2 0.03 14.6 2.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1286) ALMT PF11744.8 NODE_57917_length_290_cov_73.627451_g49978_i0reverse_frame_3 - 0.17 10.7 2.2 0.22 10.3 2.2 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter BNR_2 PF13088.6 NODE_57917_length_290_cov_73.627451_g49978_i0forward_frame_3 - 0.054 12.8 0.0 0.058 12.7 0.0 1.0 1 0 0 1 1 1 0 BNR repeat-like domain DUF4560 PF15118.6 NODE_57908_length_290_cov_101.219608_g49969_i0reverse_frame_3 - 0.024 14.5 0.3 0.037 13.9 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4560) TT_ORF1 PF02956.14 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_3 - 3 6.4 12.2 3 6.4 12.2 1.0 1 0 0 1 1 1 0 TT viral orf 1 RNA_polI_A34 PF08208.11 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.074 13.1 21.4 0.077 13.1 21.4 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 RNA_pol_Rpc4 PF05132.14 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.16 12.4 7.7 0.18 12.3 7.7 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 PcfK PF14058.6 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.36 11.1 14.9 0.42 10.9 14.9 1.0 1 0 0 1 1 1 0 PcfK-like protein DDHD PF02862.17 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.37 10.9 4.4 0.39 10.8 4.4 1.0 1 0 0 1 1 1 0 DDHD domain AAA_11 PF13086.6 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 0.78 9.5 8.0 0.8 9.4 8.0 1.0 1 0 0 1 1 1 0 AAA domain PPL5 PF18168.1 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 1.3 8.3 8.2 1.4 8.2 8.2 1.0 1 0 0 1 1 1 0 Prim-pol family 5 RR_TM4-6 PF06459.12 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 1.3 8.8 12.6 1.5 8.6 12.6 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 2.5 6.8 10.0 2.9 6.6 10.0 1.0 1 0 0 1 1 1 0 Presenilin DUF913 PF06025.12 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 2.8 6.8 6.3 3.1 6.7 6.3 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF2828 PF11443.8 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 7.2 4.6 13.4 8 4.4 13.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) EOS1 PF12326.8 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 7.8 6.4 7.0 8.6 6.2 7.0 1.1 1 0 0 1 1 1 0 N-glycosylation protein Coilin_N PF15862.5 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 8.3 6.2 22.3 10 5.9 22.3 1.1 1 0 0 1 1 1 0 Coilin N-terminus NPR3 PF03666.13 NODE_57905_length_290_cov_111.490196_g49966_i0reverse_frame_2 - 10 4.8 15.7 11 4.6 15.7 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 HAD_SAK_2 PF18143.1 NODE_57904_length_290_cov_116.321569_g49965_i0forward_frame_2 - 2.1e-05 24.9 0.0 3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins DUF2052 PF09747.9 NODE_57898_length_290_cov_295.513725_g49959_i0reverse_frame_3 - 0.0014 18.8 4.2 0.0017 18.5 4.2 1.1 1 0 0 1 1 1 1 Coiled-coil domain containing protein (DUF2052) DOR PF14839.6 NODE_57898_length_290_cov_295.513725_g49959_i0reverse_frame_3 - 0.038 13.9 1.2 0.036 14.0 1.2 1.1 1 0 0 1 1 1 0 DOR family YqfQ PF14181.6 NODE_57898_length_290_cov_295.513725_g49959_i0reverse_frame_3 - 0.09 13.0 8.3 0.12 12.6 8.3 1.1 1 0 0 1 1 1 0 YqfQ-like protein DUF3000 PF11452.8 NODE_57896_length_290_cov_314.231373_g49957_i0reverse_frame_3 - 0.029 13.9 0.1 0.054 13.0 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3000) HypA PF01155.19 NODE_57893_length_290_cov_1381.423529_g49954_i0forward_frame_3 - 0.04 13.9 4.4 0.045 13.8 4.4 1.2 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3644 PF12358.8 NODE_57893_length_290_cov_1381.423529_g49954_i0forward_frame_3 - 0.76 10.3 2.6 6 7.4 2.6 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3644) DUF4768 PF15989.5 NODE_57886_length_291_cov_0.886719_g49947_i0reverse_frame_2 - 1.2 9.2 6.6 3.4 7.7 0.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4768) Alpha_TIF PF02232.15 NODE_57885_length_291_cov_0.902344_g49946_i0forward_frame_2 - 0.065 12.3 0.2 0.068 12.3 0.2 1.0 1 0 0 1 1 1 0 Alpha trans-inducing protein (Alpha-TIF) Phage_int_SAM_5 PF13102.6 NODE_57884_length_291_cov_0.933594_g49945_i0forward_frame_2 - 0.049 14.0 3.8 0.19 12.1 3.2 1.9 1 1 1 2 2 2 0 Phage integrase SAM-like domain DUF4199 PF13858.6 NODE_57883_length_291_cov_0.968750_g49944_i0forward_frame_3 - 0.03 14.7 3.5 0.033 14.6 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) VP_N-CPKC PF11475.8 NODE_57881_length_291_cov_1.207031_g49942_i0forward_frame_3 - 0.091 12.7 5.3 0.51 10.3 1.4 2.5 2 1 0 2 2 2 0 Virion protein N terminal domain TAFII55_N PF04658.13 NODE_57877_length_291_cov_1.250000_g49938_i0reverse_frame_2 - 0.023 14.4 0.9 0.029 14.1 0.9 1.2 1 0 0 1 1 1 0 TAFII55 protein conserved region ArsD PF06953.11 NODE_57876_length_291_cov_1.289062_g49937_i0reverse_frame_2 - 0.0045 17.3 0.8 0.0045 17.3 0.8 1.6 2 0 0 2 2 2 1 Arsenical resistance operon trans-acting repressor ArsD ALC PF17527.2 NODE_57873_length_291_cov_1.359375_g49934_i0reverse_frame_2 - 0.064 12.9 0.1 0.08 12.6 0.1 1.1 1 0 0 1 1 1 0 Phage ALC protein Lig_chan-Glu_bd PF10613.9 NODE_57873_length_291_cov_1.359375_g49934_i0reverse_frame_2 - 0.073 13.3 0.0 0.081 13.1 0.0 1.1 1 0 0 1 1 1 0 Ligated ion channel L-glutamate- and glycine-binding site Zn_Tnp_IS91 PF14319.6 NODE_57873_length_291_cov_1.359375_g49934_i0forward_frame_2 - 8.2 6.5 12.4 0.12 12.4 3.2 2.0 2 0 0 2 2 2 0 Transposase zinc-binding domain Ald_Xan_dh_C2 PF02738.18 NODE_57871_length_291_cov_1.371094_g49932_i0reverse_frame_3 - 0.016 13.7 0.0 0.019 13.5 0.0 1.0 1 0 0 1 1 1 0 Molybdopterin-binding domain of aldehyde dehydrogenase Rho_GDI PF02115.17 NODE_57870_length_291_cov_1.386719_g49931_i0forward_frame_2 - 0.21 11.3 0.0 0.25 11.1 0.0 1.1 1 0 0 1 1 1 0 RHO protein GDP dissociation inhibitor Ribosomal_L32p PF01783.23 NODE_57865_length_291_cov_1.488281_g49926_i0forward_frame_3 - 0.25 11.6 3.8 3.2 8.1 2.8 2.2 2 0 0 2 2 2 0 Ribosomal L32p protein family CpXC PF14353.6 NODE_57864_length_291_cov_1.539062_g49925_i0reverse_frame_2 - 0.038 14.0 0.3 0.044 13.8 0.3 1.2 1 0 0 1 1 1 0 CpXC protein ParD_antitoxin PF03693.14 NODE_57863_length_291_cov_1.546875_g49924_i0reverse_frame_3 - 0.014 15.8 0.1 0.022 15.1 0.1 1.3 1 1 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DUF4881 PF16222.5 NODE_57859_length_291_cov_1.597656_g49920_i0forward_frame_2 - 0.0094 15.8 0.1 0.01 15.7 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4881) DUF2508 PF10704.9 NODE_57857_length_291_cov_1.714844_g49918_i0forward_frame_3 - 0.12 12.5 0.1 0.18 12.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2508) PIG-P PF08510.12 NODE_57856_length_291_cov_1.734375_g49917_i0reverse_frame_3 - 0.35 10.8 4.3 0.45 10.4 4.3 1.2 1 0 0 1 1 1 0 PIG-P CSD PF00313.22 NODE_57855_length_291_cov_1.734375_g49916_i0forward_frame_2 - 1.5e-10 40.8 0.1 2e-10 40.4 0.1 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 NODE_57855_length_291_cov_1.734375_g49916_i0forward_frame_2 - 0.00028 20.5 0.0 0.00038 20.1 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF5353 PF17304.2 NODE_57854_length_291_cov_1.738281_g49915_i0reverse_frame_3 - 0.0048 16.6 0.3 0.0097 15.6 0.3 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5353) DUF229 PF02995.17 NODE_57854_length_291_cov_1.738281_g49915_i0forward_frame_2 - 1.4e-06 27.3 0.1 1.4e-06 27.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) zf-RVT PF13966.6 NODE_57848_length_291_cov_1.878906_g49909_i0reverse_frame_3 - 0.019 15.7 1.3 0.034 14.9 1.3 1.5 1 1 0 1 1 1 0 zinc-binding in reverse transcriptase BPD_transp_1 PF00528.22 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 1.9e-07 31.0 2.6 1.9e-07 31.0 2.6 1.3 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Yip1 PF04893.17 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 0.002 17.9 5.0 0.0022 17.7 5.0 1.1 1 0 0 1 1 1 1 Yip1 domain ECF_trnsprt PF12822.7 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 0.0038 17.3 4.6 0.0046 17.1 4.6 1.1 1 0 0 1 1 1 1 ECF transporter, substrate-specific component DUF3021 PF11457.8 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 0.022 15.1 0.9 0.028 14.8 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF3278 PF11683.8 NODE_57847_length_291_cov_1.910156_g49908_i0reverse_frame_2 - 0.29 11.2 2.0 0.39 10.8 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3278) CCG PF02754.16 NODE_57847_length_291_cov_1.910156_g49908_i0forward_frame_3 - 0.034 14.4 0.3 0.051 13.8 0.3 1.3 1 0 0 1 1 1 0 Cysteine-rich domain TMEM189_B_dmain PF10520.9 NODE_57842_length_291_cov_2.039062_g49903_i0forward_frame_2 - 0.11 12.6 1.0 0.13 12.4 1.0 1.1 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain DUF4110 PF13422.6 NODE_57841_length_291_cov_2.039062_g49902_i0reverse_frame_3 - 0.077 13.1 0.2 0.092 12.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4110) DUF5408 PF17402.2 NODE_57840_length_291_cov_2.050781_g49901_i0reverse_frame_2 - 0.023 14.6 0.9 0.032 14.1 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5408) DCP2 PF05026.13 NODE_57839_length_291_cov_2.066406_g49900_i0reverse_frame_3 - 1.3e-14 54.3 3.6 1.5e-14 54.1 3.6 1.1 1 0 0 1 1 1 1 Dcp2, box A domain DUF4083 PF13314.6 NODE_57837_length_291_cov_2.144531_g49898_i0reverse_frame_3 - 0.82 9.7 5.3 1.7 8.6 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) IGF2_C PF08365.11 NODE_57833_length_291_cov_2.335938_g49894_i0forward_frame_3 - 0.057 13.4 0.5 0.099 12.7 0.5 1.5 1 1 0 1 1 1 0 Insulin-like growth factor II E-peptide zf-H2C2_2 PF13465.6 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 3.6e-12 46.1 7.8 4.3e-09 36.4 0.0 2.7 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 2.6e-06 27.8 16.7 0.00058 20.5 2.8 2.9 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 5.6e-06 26.5 17.4 0.00043 20.6 0.3 3.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_11 PF16622.5 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 0.011 15.5 0.9 0.011 15.5 0.9 2.9 3 0 0 3 3 3 0 zinc-finger C2H2-type Spt46 PF17734.1 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 0.13 12.1 3.3 0.22 11.3 0.3 1.9 1 1 1 2 2 2 0 Spermatogenesis-associated protein 46 Zn-ribbon_8 PF09723.10 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 0.14 12.3 3.2 1.6 8.9 0.1 2.5 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2HC_2 PF13913.6 NODE_57829_length_291_cov_2.410156_g49890_i0forward_frame_2 - 0.26 11.2 7.4 0.31 11.0 0.0 2.8 3 0 0 3 3 3 0 zinc-finger of a C2HC-type DUF4880 PF16220.5 NODE_57828_length_291_cov_2.457031_g49889_i0reverse_frame_3 - 0.1 12.5 3.5 0.14 12.0 3.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4880) MHC2-interact PF09307.10 NODE_57828_length_291_cov_2.457031_g49889_i0forward_frame_2 - 0.16 11.9 0.1 0.26 11.3 0.1 1.3 1 0 0 1 1 1 0 CLIP, MHC2 interacting Acylphosphatase PF00708.18 NODE_57827_length_291_cov_2.531250_g49888_i0reverse_frame_2 - 4.5e-09 36.6 0.5 7.2e-09 35.9 0.5 1.3 1 0 0 1 1 1 1 Acylphosphatase CD52 PF15116.6 NODE_57824_length_291_cov_2.867188_g49885_i0forward_frame_2 - 0.35 10.9 3.2 0.64 10.1 3.2 1.5 1 0 0 1 1 1 0 CAMPATH-1 antigen Hum_adeno_E3A PF05393.11 NODE_57822_length_291_cov_3.035156_g49883_i0reverse_frame_3 - 6.8 6.7 7.0 3.6 7.6 5.4 1.4 1 1 0 1 1 1 0 Human adenovirus early E3A glycoprotein ProQ PF04352.13 NODE_57821_length_291_cov_3.058594_g49882_i0forward_frame_3 - 0.21 11.5 0.1 0.27 11.1 0.1 1.3 1 0 0 1 1 1 0 ProQ/FINO family DUF5367 PF17329.2 NODE_57819_length_291_cov_3.117188_g49880_i0forward_frame_3 - 0.22 11.7 0.3 0.22 11.7 0.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5367) UDPG_MGDP_dh_N PF03721.14 NODE_57818_length_291_cov_3.121094_g49879_i0reverse_frame_3 - 3.8e-10 39.6 0.7 4.2e-10 39.5 0.7 1.0 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Glyco_hydro_4 PF02056.16 NODE_57818_length_291_cov_3.121094_g49879_i0reverse_frame_3 - 0.0052 16.4 0.2 0.0086 15.7 0.1 1.4 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase EspA PF03433.13 NODE_57815_length_291_cov_4.027344_g49876_i0forward_frame_3 - 0.036 13.9 2.8 0.042 13.7 2.6 1.3 1 1 0 1 1 1 0 EspA-like secreted protein Defensin_1 PF00323.19 NODE_57812_length_291_cov_4.875000_g49873_i0reverse_frame_2 - 0.21 12.2 2.6 3.8 8.2 0.2 3.0 3 0 0 3 3 3 0 Mammalian defensin DUF4456 PF14644.6 NODE_57808_length_291_cov_20.757812_g49869_i0reverse_frame_3 - 0.017 14.8 0.1 0.02 14.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4456) DUF1326 PF07040.11 NODE_57808_length_291_cov_20.757812_g49869_i0reverse_frame_2 - 2.3 8.2 7.1 3.3 7.7 7.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1326) zf-RING_5 PF14634.6 NODE_57806_length_291_cov_35.054688_g49867_i0reverse_frame_2 - 0.21 11.6 3.9 0.39 10.7 3.9 1.4 1 1 0 1 1 1 0 zinc-RING finger domain zf-A20 PF01754.16 NODE_57806_length_291_cov_35.054688_g49867_i0reverse_frame_2 - 4.6 7.3 9.0 9.2 6.3 2.8 2.3 2 0 0 2 2 2 0 A20-like zinc finger DUF443 PF04276.12 NODE_57803_length_291_cov_42.062500_g49864_i0forward_frame_3 - 3.6 7.3 7.3 2.2 8.0 6.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF443) UMPH-1 PF05822.12 NODE_57801_length_291_cov_52.664062_g49862_i0reverse_frame_3 - 0.1 12.1 0.1 0.12 11.8 0.1 1.1 1 0 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) DUF4175 PF13779.6 NODE_57798_length_291_cov_57.976563_g49859_i0forward_frame_3 - 0.12 10.2 0.0 0.14 10.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) PAP1 PF08601.10 NODE_57797_length_291_cov_58.230469_g49858_i0reverse_frame_3 - 7.1 6.3 9.4 9.7 5.8 9.4 1.2 1 0 0 1 1 1 0 Transcription factor PAP1 Copine PF07002.16 NODE_57796_length_291_cov_58.554688_g49857_i0reverse_frame_2 - 1.1e-10 41.3 0.0 1.3e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 Copine Alg6_Alg8 PF03155.15 NODE_57794_length_291_cov_58.910156_g49855_i0forward_frame_3 - 0.021 13.8 3.9 0.025 13.6 3.9 1.0 1 0 0 1 1 1 0 ALG6, ALG8 glycosyltransferase family PPR_2 PF13041.6 NODE_57791_length_291_cov_65.394531_g49852_i0reverse_frame_2 - 0.02 15.1 0.0 0.033 14.4 0.0 1.3 1 0 0 1 1 1 0 PPR repeat family 2OG-FeII_Oxy_3 PF13640.6 NODE_57789_length_291_cov_70.945312_g49850_i0reverse_frame_2 - 1.5e-07 32.2 0.0 1.9e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 NODE_57789_length_291_cov_70.945312_g49850_i0reverse_frame_2 - 0.0049 17.3 0.0 0.006 17.1 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Gcn1_N PF12074.8 NODE_57782_length_291_cov_84.625000_g49843_i0reverse_frame_3 - 0.13 11.5 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Generalcontrol nonderepressible 1 (Gcn1) N-terminal EGF_CA PF07645.15 NODE_57779_length_291_cov_93.300781_g49840_i0reverse_frame_2 - 0.071 13.3 1.7 0.092 13.0 0.3 1.9 2 1 0 2 2 2 0 Calcium-binding EGF domain Mut7-C PF01927.16 NODE_57778_length_291_cov_99.527344_g49839_i0reverse_frame_3 - 0.13 12.4 1.0 0.16 12.1 0.4 1.4 1 1 0 1 1 1 0 Mut7-C RNAse domain TMEM213 PF15192.6 NODE_57776_length_291_cov_115.320312_g49837_i0reverse_frame_2 - 1.6 8.7 7.6 1.3 9.1 6.2 1.6 1 1 0 1 1 1 0 TMEM213 family RTC4 PF14474.6 NODE_57770_length_291_cov_172.675781_g49831_i0reverse_frame_3 - 0.067 13.4 0.9 0.099 12.8 0.9 1.3 1 0 0 1 1 1 0 RTC4-like domain zf-B_box PF00643.24 NODE_57769_length_291_cov_181.984375_g49830_i0forward_frame_3 - 0.038 14.2 2.9 0.052 13.7 2.9 1.2 1 0 0 1 1 1 0 B-box zinc finger DUF1768 PF08719.11 NODE_57768_length_291_cov_192.152344_g49829_i0reverse_frame_3 - 2.5e-12 47.3 0.2 3.4e-12 46.9 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) UCH PF00443.29 NODE_57767_length_291_cov_210.539062_g49828_i0reverse_frame_3 - 2.7e-06 27.1 0.1 3.3e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_57767_length_291_cov_210.539062_g49828_i0reverse_frame_3 - 0.022 14.3 0.0 0.029 14.0 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase DUF3844 PF12955.7 NODE_57766_length_291_cov_235.496094_g49827_i0reverse_frame_2 - 0.069 13.3 1.0 0.092 12.9 0.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3844) IL6Ra-bind PF09240.10 ORF99229 - 0.011 16.2 0.3 0.013 15.9 0.3 1.1 1 0 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding ribosomal_L24 PF17136.4 ORF98912 - 0.19 12.1 0.0 0.29 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 FERM_M PF00373.18 ORF98552 - 0.028 14.8 0.3 0.035 14.5 0.3 1.3 1 1 0 1 1 1 0 FERM central domain PPR_2 PF13041.6 ORF98217 - 0.00017 21.7 0.0 0.00023 21.3 0.0 1.2 1 0 0 1 1 1 1 PPR repeat family HEPN PF05168.14 ORF98217 - 0.1 12.7 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 HEPN domain ANATO PF01821.18 ORF98139 - 0.14 13.0 2.8 0.94 10.4 1.6 2.2 1 1 1 2 2 2 0 Anaphylotoxin-like domain DUF5473 PF17567.2 ORF9637 - 0.33 11.2 7.3 0.45 10.8 7.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5473) Toxin_38 PF14866.6 ORF95423 - 0.25 11.7 2.9 2.3 8.6 0.9 2.1 1 1 1 2 2 2 0 Potassium channel toxin DUF5643 PF18705.1 ORF94302 - 0.019 14.9 0.1 0.025 14.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5643) Cystatin PF00031.21 ORF94242 - 6.1e-10 39.2 0.0 6.8e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Cystatin domain SQAPI PF16845.5 ORF94242 - 0.047 14.0 0.8 0.073 13.4 0.8 1.4 1 1 0 1 1 1 0 Aspartic acid proteinase inhibitor SHE3 PF17078.5 ORF93714 - 0.059 13.1 3.3 0.069 12.9 3.3 1.0 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 MIT_LIKE_ACTX PF17556.2 ORF92229 - 2.7 8.6 5.8 0.27 11.8 1.1 1.8 2 1 0 2 2 2 0 MIT-like atracotoxin family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks278.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks278.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks278.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks278.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:23:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Na_Ca_ex PF01699.24 ORF9195 - 0.00046 20.2 2.3 0.00052 20.0 2.3 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein SecD_SecF PF02355.16 ORF9195 - 0.11 11.9 0.2 0.13 11.6 0.2 1.1 1 0 0 1 1 1 0 Protein export membrane protein Ca_hom_mod PF14798.6 ORF9195 - 0.14 11.2 0.0 0.18 10.9 0.0 1.2 1 0 0 1 1 1 0 Calcium homeostasis modulator SKA2 PF16740.5 ORF91922 - 0.05 13.4 0.2 0.062 13.1 0.2 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Kelch_4 PF13418.6 ORF90975 - 1.8e-07 31.0 2.0 4.2e-06 26.7 0.3 2.1 1 1 1 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF90975 - 0.00096 19.1 0.1 0.23 11.5 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 ORF90975 - 0.01 16.1 0.6 0.25 11.7 0.1 2.3 1 1 1 2 2 2 0 Kelch motif Kelch_2 PF07646.15 ORF90975 - 0.037 14.0 0.1 0.51 10.4 0.0 2.3 2 0 0 2 2 2 0 Kelch motif Kelch_3 PF13415.6 ORF90975 - 0.076 13.3 0.2 0.18 12.1 0.0 1.8 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF90975 - 0.092 12.3 0.4 1.1 8.9 0.0 2.3 2 0 0 2 2 2 0 Kelch motif ShK PF01549.24 ORF90486 - 0.44 11.1 5.8 0.27 11.8 2.0 2.4 2 1 0 2 2 2 0 ShK domain-like DUF5090 PF17009.5 ORF89834 - 4.8 7.1 8.9 5.7 6.9 8.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) AAA_lid_3 PF17862.1 ORF88704 - 0.2 11.5 0.8 0.44 10.4 0.8 1.6 2 0 0 2 2 2 0 AAA+ lid domain Trm5_N PF18093.1 ORF88391 - 0.022 14.7 0.5 0.16 11.9 0.3 2.0 2 0 0 2 2 2 0 tRNA methyltransferase 5 N-terminal domain Pox_T4_C PF04490.12 ORF87726 - 0.16 12.2 0.1 0.34 11.1 0.0 1.5 1 1 1 2 2 2 0 Poxvirus T4 protein, C terminus PFK PF00365.20 ORF87474 - 1.4e-14 54.2 0.0 1.9e-14 53.7 0.0 1.2 1 0 0 1 1 1 1 Phosphofructokinase IgaA PF07095.11 ORF87334 - 1.9e-37 128.7 0.0 2.2e-37 128.5 0.0 1.0 1 0 0 1 1 1 1 Intracellular growth attenuator protein IgaA TPR_21 PF09976.9 ORF87334 - 0.11 12.2 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain AAA_29 PF13555.6 ORF8709 - 0.094 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 ORF8709 - 0.15 12.6 0.0 0.19 12.3 0.0 1.1 1 0 0 1 1 1 0 ABC transporter Cystatin PF00031.21 ORF86253 - 6.1e-10 39.2 0.0 6.8e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Cystatin domain SQAPI PF16845.5 ORF86253 - 0.047 14.0 0.8 0.073 13.4 0.8 1.4 1 1 0 1 1 1 0 Aspartic acid proteinase inhibitor WCOR413 PF05562.11 ORF86097 - 0.02 14.8 0.4 0.023 14.7 0.4 1.1 1 0 0 1 1 1 0 Cold acclimation protein WCOR413 DUF4710 PF15828.5 ORF8494 - 0.014 15.5 2.0 0.02 15.0 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DUF5645 PF18713.1 ORF8494 - 0.022 15.1 0.1 0.025 14.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5645) Nodulin PF02451.15 ORF84213 - 0.11 12.0 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Nodulin DUF2781 PF10914.8 ORF83955 - 0.12 12.8 0.0 0.14 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) RNF111_N PF15303.6 ORF83770 - 0.038 13.7 0.8 0.038 13.8 0.8 1.1 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase Arkadia N-terminus E1-E2_ATPase PF00122.20 ORF83744 - 0.12 11.9 0.7 0.14 11.7 0.7 1.1 1 0 0 1 1 1 0 E1-E2 ATPase RGS12_usC PF16612.5 ORF82974 - 0.21 12.0 4.7 0.24 11.8 4.7 1.1 1 0 0 1 1 1 0 C-terminal unstructured region of RGS12 FeS_assembly_P PF01883.19 ORF81633 - 1.7e-07 31.3 0.0 2.5e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein TerY_C PF15616.6 ORF81633 - 0.09 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain M_domain PF12938.7 ORF816 - 0.045 13.5 0.4 0.055 13.3 0.4 1.0 1 0 0 1 1 1 0 M domain of GW182 IPI_T4 PF11634.8 ORF7940 - 0.2 11.7 2.1 19 5.3 0.1 3.0 1 1 2 3 3 3 0 Nuclease inhibitor from bacteriophage T4 DUF2947 PF11163.8 ORF79397 - 0.13 12.1 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2947) SHE3 PF17078.5 ORF79285 - 0.059 13.1 3.3 0.069 12.9 3.3 1.0 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 zf-C3HC4_3 PF13920.6 ORF79229 - 0.00017 21.4 11.3 0.00021 21.1 11.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF79229 - 0.00045 20.5 13.1 0.00064 20.0 13.1 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_10 PF16685.5 ORF79229 - 0.0014 18.7 8.8 0.0019 18.3 8.8 1.2 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-C3HC4_2 PF13923.6 ORF79229 - 0.0046 16.8 15.7 0.0081 16.0 15.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zinc-ribbons_6 PF07191.12 ORF79229 - 0.054 13.5 7.8 0.25 11.4 0.7 2.2 1 1 1 2 2 2 0 zinc-ribbons zf-AN1 PF01428.16 ORF79229 - 0.066 13.4 3.0 0.066 13.4 3.0 2.2 1 1 1 2 2 2 0 AN1-like Zinc finger zf-rbx1 PF12678.7 ORF79229 - 0.089 13.1 12.8 1.3 9.4 12.8 2.2 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf-RING-like PF08746.11 ORF79229 - 0.11 12.9 9.9 0.15 12.4 9.9 1.3 1 0 0 1 1 1 0 RING-like domain zf-ribbon_3 PF13248.6 ORF79229 - 0.13 11.8 0.3 0.13 11.8 0.3 2.8 2 1 1 3 3 3 0 zinc-ribbon domain zf-B_box PF00643.24 ORF79229 - 0.18 12.0 8.5 0.11 12.6 4.6 2.1 2 0 0 2 2 2 0 B-box zinc finger Zn_ribbon_17 PF17120.5 ORF79229 - 0.19 11.3 6.7 0.35 10.5 6.7 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 ORF79229 - 0.24 11.3 15.2 0.35 10.8 15.2 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_Tnp_IS1 PF03811.13 ORF79229 - 1.5 8.6 6.6 13 5.6 0.0 2.9 2 1 0 2 2 2 0 InsA N-terminal domain zf-RING_5 PF14634.6 ORF79229 - 2.1 8.3 11.7 4.2 7.4 11.9 1.5 1 1 0 1 1 1 0 zinc-RING finger domain zf-C6H2 PF15801.5 ORF79229 - 4 7.8 16.2 13 6.1 3.0 3.1 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding IBR PF01485.21 ORF79229 - 5.8 7.2 11.7 29 5.0 11.8 2.1 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain zf-FPG_IleRS PF06827.14 ORF79229 - 7.8 6.5 16.8 11 6.0 5.0 3.9 2 1 1 3 3 3 0 Zinc finger found in FPG and IleRS zf-Sec23_Sec24 PF04810.15 ORF79229 - 8.2 6.6 13.4 2.5 8.2 8.8 2.1 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger Invas_SpaK PF03519.14 ORF78225 - 0.044 13.9 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Invasion protein B family DUF1508 PF07411.12 ORF78054 - 0.11 12.3 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1508) DUF983 PF06170.12 ORF77927 - 0.024 15.0 0.1 0.03 14.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF983) DUF4556 PF15094.6 ORF77110 - 0.15 11.2 0.0 0.19 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4556) L27_N PF09060.10 ORF77110 - 0.16 12.0 0.1 0.25 11.4 0.1 1.2 1 0 0 1 1 1 0 L27_N CENP-B_dimeris PF09026.10 ORF76973 - 0.046 14.1 0.0 0.053 13.9 0.0 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain PB1 PF00564.24 ORF76792 - 2.2e-06 27.5 0.8 2.8e-06 27.2 0.8 1.2 1 0 0 1 1 1 1 PB1 domain CRC_subunit PF08624.10 ORF76792 - 0.024 15.0 0.8 0.026 15.0 0.8 1.0 1 0 0 1 1 1 0 Chromatin remodelling complex Rsc7/Swp82 subunit PseudoU_synth_2 PF00849.22 ORF76341 - 6.3e-06 26.4 0.4 7.9e-06 26.0 0.4 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase Ribosomal_S28e PF01200.18 ORF76341 - 0.021 14.8 0.1 0.029 14.3 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S28e PAC4 PF16093.5 ORF760 - 5.3e-07 29.7 0.0 6.6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 zf-RING_11 PF17123.5 ORF75755 - 9.9e-09 34.8 3.9 1.6e-08 34.2 3.9 1.3 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF75755 - 1.4e-08 34.9 2.2 2.1e-08 34.4 2.2 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF75755 - 1.7e-06 27.9 2.7 3.2e-06 27.1 2.7 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF75755 - 1.2e-05 25.1 1.5 2.5e-05 24.0 1.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF75755 - 5e-05 23.5 5.8 0.00029 21.0 5.8 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF75755 - 8.7e-05 22.3 2.5 0.00015 21.5 2.5 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF75755 - 0.00027 20.5 1.0 0.00037 20.0 1.0 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF75755 - 0.00031 20.7 0.5 0.00052 20.0 0.5 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF75755 - 0.0011 18.9 1.8 0.0018 18.2 1.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_5 PF17121.5 ORF75755 - 0.0017 18.2 1.4 0.0026 17.6 1.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF75755 - 0.0022 18.1 2.1 0.0039 17.3 2.1 1.4 1 0 0 1 1 1 1 FANCL C-terminal domain JmjC PF02373.22 ORF75755 - 0.0031 17.9 0.1 0.004 17.6 0.1 1.2 1 0 0 1 1 1 1 JmjC domain, hydroxylase DUF851 PF05867.11 ORF75755 - 0.026 14.0 0.1 0.03 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF851) Prok-RING_1 PF14446.6 ORF75755 - 0.031 14.2 0.6 0.045 13.7 0.6 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 RINGv PF12906.7 ORF75755 - 0.19 11.9 2.7 0.59 10.3 2.6 1.8 1 1 0 1 1 1 0 RING-variant domain M_domain PF12938.7 ORF75595 - 0.045 13.5 0.4 0.055 13.3 0.4 1.0 1 0 0 1 1 1 0 M domain of GW182 Defensin_int PF17858.1 ORF75194 - 3.1 7.8 8.5 4.6 7.3 6.8 2.3 1 1 1 2 2 2 0 Platypus intermediate defensin-like peptide Hpt PF01627.23 ORF75112 - 3.2e-07 30.5 0.8 5.2e-07 29.8 0.8 1.4 1 1 0 1 1 1 1 Hpt domain Carbam_trans_C PF16861.5 ORF75112 - 0.087 12.4 0.1 0.12 12.0 0.1 1.3 1 1 0 1 1 1 0 Carbamoyltransferase C-terminus GHMP_kinases_C PF08544.13 ORF75112 - 0.13 12.7 0.2 1.4 9.3 0.2 2.1 1 1 0 1 1 1 0 GHMP kinases C terminal Myb_DNA-bind_6 PF13921.6 ORF74955 - 5.6e-13 48.9 2.6 8e-13 48.4 2.6 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 ORF74955 - 1.2e-11 44.6 3.5 1.7e-11 44.1 3.5 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_4 PF13837.6 ORF74955 - 0.00073 19.9 4.7 0.002 18.4 4.7 1.7 1 1 0 1 1 1 1 Myb/SANT-like DNA-binding domain HTH_32 PF13565.6 ORF74955 - 0.016 15.8 0.1 0.021 15.4 0.1 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Myb_DNA-bind_2 PF08914.11 ORF74955 - 0.032 14.4 0.9 0.066 13.4 0.9 1.6 1 1 0 1 1 1 0 Rap1 Myb domain SANT_DAMP1_like PF16282.5 ORF74955 - 0.065 13.4 0.4 0.077 13.2 0.4 1.3 1 0 0 1 1 1 0 SANT/Myb-like domain of DAMP1 GYR PF02756.14 ORF7474 - 1.1 9.0 5.4 3 7.6 5.4 1.8 1 0 0 1 1 1 0 GYR motif DUF5359 PF17313.2 ORF74269 - 0.17 11.9 1.9 0.28 11.2 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5359) PCNA_N PF00705.18 ORF73436 - 0.052 13.3 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 Proliferating cell nuclear antigen, N-terminal domain DUF1385 PF07136.11 ORF73115 - 1.4 8.1 9.8 0.61 9.3 6.7 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1385) FERM_M PF00373.18 ORF72817 - 0.028 14.8 0.3 0.035 14.5 0.3 1.3 1 1 0 1 1 1 0 FERM central domain AKAP28 PF14469.6 ORF72165 - 0.13 12.0 0.1 0.16 11.7 0.1 1.1 1 0 0 1 1 1 0 28 kDa A-kinase anchor Abhydrolase_6 PF12697.7 ORF70666 - 0.1 13.2 0.0 0.1 13.2 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF5494 PF17598.2 ORF67954 - 0.04 14.0 0.0 0.048 13.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5494) FliT PF05400.13 ORF66774 - 0.82 10.5 8.5 0.17 12.8 4.5 1.9 2 1 0 2 2 2 0 Flagellar protein FliT zf-C4H2 PF10146.9 ORF66774 - 3.5 7.9 8.7 3.6 7.8 8.7 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF2205 PF10224.9 ORF66774 - 3.6 7.6 11.1 0.35 10.9 3.8 2.1 1 1 1 2 2 2 0 Short coiled-coil protein DUF5463 PF17551.2 ORF66717 - 0.051 13.5 1.1 0.13 12.2 1.1 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5463) RAG1_imp_bd PF12560.8 ORF66077 - 0.49 9.9 6.2 0.61 9.6 6.2 1.0 1 0 0 1 1 1 0 RAG1 importin binding Ufd2P_core PF10408.9 ORF65725 - 6.7e-23 81.2 0.4 7.3e-23 81.0 0.4 1.0 1 0 0 1 1 1 1 Ubiquitin elongating factor core Flu_M2 PF00599.17 ORF65602 - 0.11 12.6 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Influenza Matrix protein (M2) GFA PF04828.14 ORF65531 - 0.066 13.6 0.1 0.11 12.8 0.1 1.4 1 0 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme INCENP_N PF12178.8 ORF65127 - 0.3 11.1 0.7 2.1 8.4 0.3 2.2 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal DUF5351 PF17302.2 ORF64900 - 0.069 13.3 0.2 0.2 11.9 0.2 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5351) HECT PF00632.25 ORF64813 - 7.3e-17 61.8 0.0 8.5e-17 61.6 0.0 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) IL6 PF00489.17 ORF64582 - 0.061 12.9 0.2 0.68 9.5 0.1 1.9 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family DUF1010 PF06231.11 ORF64376 - 0.41 11.2 5.3 0.59 10.7 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1010) Fijivirus_P9-2 PF06837.11 ORF64334 - 0.36 10.3 8.2 0.37 10.2 8.2 1.2 1 0 0 1 1 1 0 Fijivirus P9-2 protein DUF1279 PF06916.13 ORF6405 - 0.37 11.4 0.1 0.37 11.4 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1279) SHE3 PF17078.5 ORF63336 - 0.072 12.8 3.0 0.084 12.6 3.0 1.0 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 Toxin_8 PF07365.12 ORF63110 - 0.13 12.4 0.2 0.22 11.7 0.2 1.3 1 0 0 1 1 1 0 Alpha conotoxin precursor RNF220 PF15926.5 ORF62779 - 0.027 14.1 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase RNF220 CreD PF06123.12 ORF62231 - 0.1 11.4 0.9 0.11 11.3 0.9 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD DUF3099 PF11298.8 ORF61828 - 0.026 14.6 0.1 0.044 13.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) CreD PF06123.12 ORF61176 - 0.1 11.4 0.9 0.11 11.3 0.9 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD M_domain PF12938.7 ORF60314 - 0.045 13.5 0.4 0.055 13.3 0.4 1.0 1 0 0 1 1 1 0 M domain of GW182 TspO_MBR PF03073.15 ORF59890 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family CxC2 PF18803.1 ORF59877 - 0.01 15.9 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases DUF5576 PF17739.1 ORF59877 - 0.035 14.2 1.4 0.042 14.0 1.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5576) SLATT_6 PF18169.1 ORF59736 - 0.063 12.9 0.6 0.068 12.8 0.6 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 SoxE PF06525.11 ORF59736 - 0.09 12.3 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Sulfocyanin (SoxE) domain DUF1251 PF06856.11 ORF58644 - 0.041 13.6 0.0 0.052 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1251) Ras PF00071.22 ORF58417 - 3.9e-35 120.8 0.1 4.3e-35 120.7 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF58417 - 3.6e-26 91.7 0.1 3.9e-26 91.6 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF58417 - 1.6e-08 34.2 0.1 1.7e-08 34.1 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF58417 - 1.3e-05 25.2 0.0 1.4e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF58417 - 0.0053 16.1 0.0 0.0055 16.1 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF58417 - 0.0059 16.2 0.1 0.058 12.9 0.1 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain DAP3 PF10236.9 ORF58417 - 0.026 13.7 0.0 0.034 13.3 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_24 PF13479.6 ORF58417 - 0.028 14.1 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF58417 - 0.03 14.6 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF58417 - 0.078 12.9 0.0 0.088 12.7 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 ORF58417 - 0.1 12.4 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 ORF58417 - 0.12 11.8 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF58417 - 0.16 12.5 0.1 0.19 12.2 0.1 1.2 1 1 0 1 1 1 0 ABC transporter LSM PF01423.22 ORF5802 - 6e-09 35.5 3.0 6.5e-07 28.9 3.0 2.2 1 1 0 1 1 1 1 LSM domain TetR_C_11 PF16859.5 ORF57627 - 0.0064 16.8 0.1 0.0068 16.7 0.1 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain ribosomal_L24 PF17136.4 ORF56270 - 0.19 12.1 0.0 0.29 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 TspO_MBR PF03073.15 ORF55255 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family TspO_MBR PF03073.15 ORF55200 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family DRY_EERY PF09750.9 ORF54054 - 0.017 15.4 1.6 0.017 15.4 1.6 1.1 1 0 0 1 1 1 0 Alternative splicing regulator SWIM PF04434.17 ORF5353 - 2.7 7.7 7.4 4.9 6.9 7.4 1.4 1 0 0 1 1 1 0 SWIM zinc finger DUF2805 PF10985.8 ORF53039 - 0.11 12.8 0.0 0.21 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2805) FANCI_HD1 PF14679.6 ORF52895 - 0.15 12.0 2.5 0.23 11.5 0.2 2.1 1 1 1 2 2 2 0 FANCI helical domain 1 DUF5637 PF18687.1 ORF52770 - 2 8.4 9.1 6.6 6.8 0.8 3.1 2 1 1 3 3 3 0 Family of unknown function (DUF5637) CdiI PF07262.11 ORF52571 - 0.025 14.3 1.5 0.03 14.1 1.5 1.2 1 0 0 1 1 1 0 CDI immunity protein Cystatin PF00031.21 ORF52107 - 6.1e-10 39.2 0.0 6.8e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Cystatin domain SQAPI PF16845.5 ORF52107 - 0.047 14.0 0.8 0.073 13.4 0.8 1.4 1 1 0 1 1 1 0 Aspartic acid proteinase inhibitor Spt4 PF06093.13 ORF51711 - 0.028 14.5 1.2 0.056 13.6 1.2 1.5 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger Stc1 PF12898.7 ORF51711 - 0.16 12.5 5.2 0.26 11.9 5.2 1.5 1 1 0 1 1 1 0 Stc1 domain Ank_5 PF13857.6 ORF51359 - 0.006 16.9 0.0 0.016 15.5 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF51359 - 0.13 12.9 0.0 0.84 10.3 0.0 2.1 2 1 0 2 2 2 0 Ankyrin repeats (many copies) FhuF PF06276.12 ORF50464 - 0.15 12.5 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Ferric iron reductase FhuF-like transporter Paramyxo_PNT PF14320.6 ORF50294 - 0.2 10.8 0.1 0.26 10.4 0.1 1.1 1 0 0 1 1 1 0 Phosphoprotein P region PNT disordered TMEM107 PF14995.6 ORF50161 - 0.00053 20.4 0.2 0.00054 20.4 0.2 1.1 1 0 0 1 1 1 1 Transmembrane protein PAC4 PF16093.5 ORF50020 - 5.3e-07 29.7 0.0 6.6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 zf-RING_2 PF13639.6 ORF49576 - 1.6e-12 47.5 11.9 1.6e-12 47.5 11.9 1.7 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF49576 - 1.2e-08 34.6 7.8 1.2e-08 34.6 7.8 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF49576 - 1.3e-08 34.7 9.0 2.3e-08 33.9 9.0 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF49576 - 1.1e-07 31.8 8.5 1.1e-07 31.8 8.5 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF49576 - 7.8e-07 28.9 12.9 7.8e-07 28.9 12.9 1.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF49576 - 1.1e-06 28.9 13.2 2.1e-06 27.9 11.7 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF49576 - 3.9e-06 26.6 11.8 3.9e-06 26.6 11.8 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF49576 - 1.3e-05 24.9 8.6 1.3e-05 24.9 8.6 1.4 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF49576 - 0.0008 19.0 8.6 0.0018 17.8 7.6 1.9 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type U-box PF04564.15 ORF49576 - 0.00082 19.5 0.2 0.0028 17.8 0.2 1.7 1 1 1 2 2 2 1 U-box domain zf-C3HC4_4 PF15227.6 ORF49576 - 0.0012 19.0 9.8 0.0012 18.9 8.3 1.9 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF49576 - 0.0018 18.1 10.4 0.0026 17.6 9.3 1.8 2 1 0 2 2 2 1 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF49576 - 0.0068 16.5 7.3 0.015 15.4 7.3 1.6 1 1 0 1 1 1 1 RING-variant domain zf-ANAPC11 PF12861.7 ORF49576 - 0.03 14.4 8.3 0.041 13.9 7.4 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF49576 - 0.031 14.2 7.7 0.24 11.3 3.0 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Zf_RING PF16744.5 ORF49576 - 0.38 10.9 5.8 0.13 12.4 3.0 1.6 1 1 1 2 2 2 0 KIAA1045 RING finger zf-RING-like PF08746.11 ORF49576 - 0.59 10.5 10.4 0.44 10.9 8.6 1.8 2 0 0 2 2 2 0 RING-like domain FANCL_C PF11793.8 ORF49576 - 1.9 8.7 8.9 10 6.4 8.9 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain zf-Nse PF11789.8 ORF49576 - 2.1 8.3 9.5 0.46 10.3 5.8 1.9 2 1 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit zf-C3H2C3 PF17122.5 ORF49576 - 4.2 7.5 12.2 5.2 7.2 9.7 2.5 2 1 0 2 2 2 0 Zinc-finger STAG PF08514.11 ORF49262 - 0.048 13.6 0.0 0.071 13.0 0.0 1.2 1 0 0 1 1 1 0 STAG domain Polyketide_cyc2 PF10604.9 ORF48674 - 0.026 14.8 1.4 0.032 14.5 1.4 1.4 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport Thioredoxin_8 PF13905.6 ORF48103 - 0.034 14.5 0.3 0.042 14.2 0.3 1.2 1 0 0 1 1 1 0 Thioredoxin-like Thioredoxin_3 PF13192.6 ORF48072 - 0.13 12.3 0.4 0.18 11.8 0.4 1.1 1 0 0 1 1 1 0 Thioredoxin domain Cytochrome-c551 PF10643.9 ORF47177 - 0.34 10.5 5.2 0.37 10.3 5.2 1.1 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 YdfA_immunity PF12127.8 ORF47177 - 0.71 8.9 6.3 0.83 8.7 6.3 1.0 1 0 0 1 1 1 0 SigmaW regulon antibacterial IMP2_C PF18591.1 ORF46833 - 0.15 12.0 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Immune Mapped Protein 2 (IMP2) C-terminal domain TspO_MBR PF03073.15 ORF46815 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family SPC22 PF04573.12 ORF46320 - 0.11 12.0 0.2 0.15 11.5 0.2 1.2 1 0 0 1 1 1 0 Signal peptidase subunit zf-RING_2 PF13639.6 ORF45910 - 1.6e-12 47.5 11.9 1.6e-12 47.5 11.9 1.7 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF45910 - 1.2e-08 34.6 7.8 1.2e-08 34.6 7.8 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF45910 - 1.3e-08 34.7 9.0 2.3e-08 33.9 9.0 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF45910 - 1.1e-07 31.8 8.5 1.1e-07 31.8 8.5 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF45910 - 7.8e-07 28.9 12.9 7.8e-07 28.9 12.9 1.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF45910 - 1.1e-06 28.9 13.2 2.1e-06 27.9 11.7 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF45910 - 3.9e-06 26.6 11.8 3.9e-06 26.6 11.8 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF45910 - 1.3e-05 24.9 8.6 1.3e-05 24.9 8.6 1.4 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF45910 - 0.0008 19.0 8.6 0.0018 17.8 7.6 1.9 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type U-box PF04564.15 ORF45910 - 0.00082 19.5 0.2 0.0028 17.8 0.2 1.7 1 1 1 2 2 2 1 U-box domain zf-C3HC4_4 PF15227.6 ORF45910 - 0.0012 19.0 9.8 0.0012 18.9 8.3 1.9 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF45910 - 0.0018 18.1 10.4 0.0026 17.6 9.3 1.8 2 1 0 2 2 2 1 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF45910 - 0.0068 16.5 7.3 0.015 15.4 7.3 1.6 1 1 0 1 1 1 1 RING-variant domain zf-ANAPC11 PF12861.7 ORF45910 - 0.03 14.4 8.3 0.041 13.9 7.4 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF45910 - 0.031 14.2 7.7 0.24 11.3 3.0 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Zf_RING PF16744.5 ORF45910 - 0.38 10.9 5.8 0.13 12.4 3.0 1.6 1 1 1 2 2 2 0 KIAA1045 RING finger zf-RING-like PF08746.11 ORF45910 - 0.59 10.5 10.4 0.44 10.9 8.6 1.8 2 0 0 2 2 2 0 RING-like domain FANCL_C PF11793.8 ORF45910 - 1.9 8.7 8.9 10 6.4 8.9 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain zf-Nse PF11789.8 ORF45910 - 2.1 8.3 9.5 0.46 10.3 5.8 1.9 2 1 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit zf-C3H2C3 PF17122.5 ORF45910 - 4.2 7.5 12.2 5.2 7.2 9.7 2.5 2 1 0 2 2 2 0 Zinc-finger M_domain PF12938.7 ORF44986 - 0.045 13.5 0.4 0.055 13.3 0.4 1.0 1 0 0 1 1 1 0 M domain of GW182 Ank_5 PF13857.6 ORF44370 - 0.006 16.9 0.0 0.016 15.5 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF44370 - 0.13 12.9 0.0 0.84 10.3 0.0 2.1 2 1 0 2 2 2 0 Ankyrin repeats (many copies) DIL PF01843.19 ORF44142 - 0.053 13.8 0.1 0.054 13.8 0.1 1.1 1 0 0 1 1 1 0 DIL domain M_domain PF12938.7 ORF43440 - 0.045 13.5 0.4 0.055 13.3 0.4 1.0 1 0 0 1 1 1 0 M domain of GW182 IMP2_C PF18591.1 ORF4327 - 0.15 12.0 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Immune Mapped Protein 2 (IMP2) C-terminal domain RskA PF10099.9 ORF42595 - 0.018 15.4 1.5 0.023 15.0 1.5 1.0 1 0 0 1 1 1 0 Anti-sigma-K factor rskA TspO_MBR PF03073.15 ORF4233 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family DUF2972 PF11186.8 ORF42236 - 0.031 14.2 1.8 0.034 14.0 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2972) FPN1 PF06963.12 ORF42236 - 0.22 10.0 0.1 0.27 9.7 0.1 1.1 1 0 0 1 1 1 0 Ferroportin1 (FPN1) Phage_P2_GpE PF06528.12 ORF42004 - 0.029 13.9 0.0 0.06 12.9 0.0 1.5 1 0 0 1 1 1 0 Phage P2 GpE IL6Ra-bind PF09240.10 ORF41618 - 0.011 16.2 0.3 0.013 15.9 0.3 1.1 1 0 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding ECSCR PF15820.5 ORF40734 - 6.4 6.7 8.4 8.6 6.2 8.4 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF1462 PF07315.11 ORF4071 - 1.2 9.4 2.9 1.5 9.2 2.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1462) YscO PF07321.12 ORF39541 - 0.02 14.8 0.2 0.021 14.8 0.2 1.1 1 0 0 1 1 1 0 Type III secretion protein YscO DHquinase_II PF01220.19 ORF39541 - 0.023 14.3 0.0 0.028 14.1 0.0 1.0 1 0 0 1 1 1 0 Dehydroquinase class II D5_N PF08706.11 ORF3901 - 0.014 15.6 0.3 0.016 15.5 0.3 1.0 1 0 0 1 1 1 0 D5 N terminal like MutL_C PF08676.11 ORF3901 - 0.089 12.6 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 MutL C terminal dimerisation domain EF-hand_13 PF17958.1 ORF38215 - 0.096 12.5 0.0 0.19 11.6 0.0 1.4 1 1 0 1 1 1 0 EF-hand domain DUF3978 PF13123.6 ORF3807 - 0.11 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3978) Rieske PF00355.26 ORF35422 - 0.028 14.3 0.4 0.034 14.1 0.4 1.2 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain NifZ PF04319.13 ORF35422 - 0.16 11.7 0.0 0.22 11.3 0.0 1.2 1 0 0 1 1 1 0 NifZ domain Cytomega_gL PF01801.16 ORF35300 - 0.088 12.2 1.9 0.1 12.0 1.9 1.1 1 0 0 1 1 1 0 Cytomegalovirus glycoprotein L Ehbp PF10622.9 ORF35291 - 0.023 14.7 0.7 0.033 14.2 0.6 1.3 1 1 0 1 1 1 0 Energy-converting hydrogenase B subunit P (EhbP) HlyD_D23 PF16576.5 ORF33954 - 0.077 12.2 0.0 0.089 12.0 0.0 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion UPF0515 PF15135.6 ORF33671 - 0.092 12.1 2.5 0.11 11.8 2.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 D5_N PF08706.11 ORF33541 - 0.014 15.6 0.3 0.016 15.5 0.3 1.0 1 0 0 1 1 1 0 D5 N terminal like MutL_C PF08676.11 ORF33541 - 0.089 12.6 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 MutL C terminal dimerisation domain Ribosomal_L35Ae PF01247.18 ORF32850 - 0.037 14.2 0.1 0.047 13.9 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L35Ae BRCT_3 PF18428.1 ORF32609 - 0.042 13.9 1.3 0.25 11.4 0.0 2.0 1 1 1 2 2 2 0 BRCA1 C Terminus (BRCT) domain DUF1125 PF06563.11 ORF32336 - 0.14 12.1 0.8 0.29 11.1 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1125) Roughex PF06020.11 ORF31693 - 0.13 11.3 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 Drosophila roughex protein DUF1279 PF06916.13 ORF29766 - 0.37 11.4 0.1 0.37 11.4 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1279) TspO_MBR PF03073.15 ORF29750 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family CcdB PF01845.17 ORF29039 - 0.091 13.0 0.5 0.17 12.2 0.4 1.4 1 1 1 2 2 2 0 CcdB protein DUF3748 PF12566.8 ORF28172 - 0.2 11.6 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3748) Trm5_N PF18093.1 ORF27495 - 0.022 14.7 0.5 0.16 11.9 0.3 2.0 2 0 0 2 2 2 0 tRNA methyltransferase 5 N-terminal domain TspO_MBR PF03073.15 ORF27253 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family PT PF04886.12 ORF25579 - 3.7 7.2 15.7 0.27 10.8 8.3 2.6 2 1 0 2 2 2 0 PT repeat Cystatin PF00031.21 ORF24310 - 6.1e-10 39.2 0.0 6.8e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Cystatin domain SQAPI PF16845.5 ORF24310 - 0.047 14.0 0.8 0.073 13.4 0.8 1.4 1 1 0 1 1 1 0 Aspartic acid proteinase inhibitor Promethin PF16015.5 ORF24296 - 0.057 13.4 11.2 0.068 13.1 11.2 1.2 1 0 0 1 1 1 0 Promethin DUF2612 PF11041.8 ORF24284 - 0.065 13.2 0.1 0.073 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2612) 3HCDH_N PF02737.18 ORF23885 - 0.045 13.6 0.1 0.052 13.4 0.1 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PIP49_N PF14875.6 ORF23557 - 0.032 14.1 0.7 0.041 13.7 0.7 1.1 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 SHIPPO-rpt PF07004.12 ORF23114 - 0.00021 22.1 1.9 0.00026 21.7 0.6 2.0 2 1 0 2 2 2 1 Sperm-tail PG-rich repeat ANAPC15 PF15243.6 ORF22669 - 0.00035 20.9 7.5 0.00042 20.6 7.5 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 15 Astro_capsid_p PF12226.8 ORF22669 - 2.4 7.2 8.4 2.5 7.2 8.4 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein CDC45 PF02724.14 ORF22669 - 2.9 6.1 8.5 3.5 5.8 8.5 1.0 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 ORF22669 - 6.8 4.6 10.3 8.2 4.4 10.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi RRN3 PF05327.11 ORF22669 - 6.9 5.1 10.1 8 4.9 10.1 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 TspO_MBR PF03073.15 ORF22411 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family Atg14 PF10186.9 ORF22059 - 0.0023 17.1 6.1 0.0026 16.9 6.1 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 FliD_N PF02465.18 ORF22059 - 0.0026 18.4 0.5 0.0027 18.4 0.5 1.2 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus Spc7 PF08317.11 ORF22059 - 0.012 14.6 4.0 0.011 14.6 4.0 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein ATG16 PF08614.11 ORF22059 - 0.015 15.5 6.7 0.029 14.6 6.6 1.6 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) TolA_bind_tri PF16331.5 ORF22059 - 0.028 14.5 1.0 0.047 13.8 1.0 1.4 1 0 0 1 1 1 0 TolA binding protein trimerisation Spc24 PF08286.11 ORF22059 - 0.043 14.1 4.0 0.054 13.7 4.0 1.3 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 PEARLI-4 PF05278.12 ORF22059 - 0.046 13.3 4.2 0.054 13.1 4.2 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) HNH_4 PF13395.6 ORF21425 - 0.048 13.6 0.0 0.073 13.0 0.0 1.4 1 0 0 1 1 1 0 HNH endonuclease LHC PF00556.20 ORF21087 - 0.12 12.6 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 Antenna complex alpha/beta subunit EF-hand_1 PF00036.32 ORF20402 - 7.8e-14 50.1 5.6 5.4e-07 28.7 0.7 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF20402 - 1.7e-13 50.8 10.3 5.2e-11 42.8 4.5 1.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF20402 - 4e-09 35.7 6.3 0.00048 19.8 0.4 3.0 2 1 1 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF20402 - 5.4e-09 35.1 1.4 3.1e-06 26.4 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF20402 - 1e-06 28.4 7.3 0.0012 18.6 0.5 2.4 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF20402 - 0.0019 18.1 5.0 0.015 15.2 1.0 2.0 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF20402 - 0.0025 18.1 6.1 0.3 11.4 1.2 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF20402 - 0.03 14.2 6.1 1.2 9.1 0.5 2.5 1 1 1 2 2 2 0 EF hand DUF1007 PF06226.13 ORF20402 - 0.13 12.2 1.0 1.7 8.6 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1007) TspO_MBR PF03073.15 ORF19059 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family DUF167 PF02594.16 ORF18994 - 4.7e-25 87.5 0.2 5.5e-25 87.3 0.2 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 RCC1_2 PF13540.6 ORF18685 - 0.0004 20.1 0.0 0.11 12.4 0.2 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Torus PF16131.5 ORF18602 - 0.69 10.6 7.6 0.1 13.3 3.5 1.7 1 1 0 2 2 2 0 Torus domain MC1 PF05854.11 ORF18180 - 0.025 14.8 0.5 0.039 14.2 0.4 1.4 1 1 0 1 1 1 0 Non-histone chromosomal protein MC1 Fun_ATP-synt_8 PF05933.13 ORF16844 - 0.65 10.2 5.5 3.9 7.7 0.3 2.3 1 1 1 2 2 2 0 Fungal ATP synthase protein 8 (A6L) RBP_receptor PF14752.6 ORF16823 - 0.062 11.9 0.1 0.067 11.8 0.1 1.0 1 0 0 1 1 1 0 Retinol binding protein receptor DUF5434 PF17502.2 ORF15699 - 0.049 13.6 1.9 0.058 13.4 1.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5434) SUI1 PF01253.22 ORF15588 - 0.27 11.8 1.0 7.2 7.2 1.0 2.1 1 1 0 1 1 1 0 Translation initiation factor SUI1 GerE PF00196.19 ORF15299 - 0.0061 16.1 0.0 0.0098 15.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Fz PF01392.22 ORF152658 - 0.086 13.5 7.0 0.063 13.9 2.0 1.9 1 1 1 2 2 2 0 Fz domain DUF3522 PF12036.8 ORF151462 - 0.027 14.8 0.0 0.031 14.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3522) PspB PF06667.12 ORF151462 - 0.034 14.2 0.1 0.05 13.7 0.1 1.3 1 0 0 1 1 1 0 Phage shock protein B TRAP-gamma PF07074.12 ORF151462 - 0.5 9.9 2.8 4.9 6.7 0.6 2.0 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Methyltransf_10 PF05971.12 ORF151398 - 1.8e-13 50.5 0.1 1.8e-13 50.5 0.1 1.0 1 0 0 1 1 1 1 RNA methyltransferase DUF5359 PF17313.2 ORF151260 - 0.17 11.9 1.9 0.28 11.2 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5359) Tfb4 PF03850.14 ORF151166 - 0.011 15.2 2.9 0.013 15.0 2.9 1.0 1 0 0 1 1 1 0 Transcription factor Tfb4 DUF3811 PF11656.8 ORF151166 - 0.012 16.0 5.8 0.016 15.6 5.8 1.2 1 0 0 1 1 1 0 YjbD family (DUF3811) MHC2-interact PF09307.10 ORF151166 - 0.11 12.5 1.0 0.11 12.5 1.0 1.8 1 1 1 2 2 2 0 CLIP, MHC2 interacting YvrJ PF12841.7 ORF151166 - 0.13 11.8 0.2 0.29 10.7 0.2 1.6 1 0 0 1 1 1 0 YvrJ protein family p450 PF00067.22 ORF150745 - 3.7e-16 58.9 0.1 3.9e-16 58.9 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 Aida_N PF08910.10 ORF150637 - 0.83 10.1 3.3 1.2 9.6 3.3 1.3 1 0 0 1 1 1 0 Aida N-terminus T2SSM PF04612.12 ORF150404 - 1.1e-11 45.1 0.0 1.1e-11 45.0 0.0 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein M Archease PF01951.16 ORF150381 - 3.9e-14 53.1 0.0 5.3e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) DUF2935 PF11155.8 ORF150022 - 0.0027 18.0 0.3 0.003 17.9 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2935) DUF3238 PF11579.8 ORF150022 - 0.012 15.4 0.1 0.013 15.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3238) DUF1216 PF06746.11 ORF150022 - 0.037 14.0 0.2 0.04 13.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1216) NAAA-beta PF15508.6 ORF150022 - 0.088 13.1 0.2 0.63 10.4 0.2 2.0 1 1 1 2 2 2 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase Nop14 PF04147.12 ORF149036 - 0.83 7.8 3.4 0.89 7.7 3.4 1.0 1 0 0 1 1 1 0 Nop14-like family ACT PF01842.25 ORF147026 - 4.5e-10 39.1 0.0 5.9e-10 38.8 0.0 1.2 1 0 0 1 1 1 1 ACT domain ACT_5 PF13710.6 ORF147026 - 8.7e-10 38.3 0.1 1.8e-09 37.3 0.1 1.5 1 1 1 2 2 2 1 ACT domain ACT_4 PF13291.6 ORF147026 - 5.4e-05 23.7 0.1 7.4e-05 23.3 0.1 1.2 1 0 0 1 1 1 1 ACT domain DUF4441 PF14536.6 ORF146219 - 0.0046 17.1 0.2 0.0056 16.9 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4441) Sad1_UNC PF07738.13 ORF145648 - 0.048 13.7 0.2 0.059 13.4 0.2 1.2 1 0 0 1 1 1 0 Sad1 / UNC-like C-terminal AKAP95 PF04988.12 ORF145635 - 0.045 14.0 0.4 0.054 13.7 0.4 1.2 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) zf-RanBP PF00641.18 ORF145635 - 1.2 8.5 8.2 0.14 11.5 2.1 2.6 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others Pea-VEAacid PF08111.11 ORF144777 - 0.15 12.4 0.4 0.32 11.4 0.4 1.5 1 0 0 1 1 1 0 Pea-VEAacid family IATP PF04568.12 ORF144762 - 1.1 9.7 3.5 1.9 9.0 3.5 1.4 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP MFS_1 PF07690.16 ORF144666 - 0.00018 20.6 3.4 0.0002 20.4 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DS PF01916.17 ORF144172 - 1.3 8.2 2.7 4.4 6.5 0.3 2.0 1 1 1 2 2 2 0 Deoxyhypusine synthase CLIP_SPH_mas PF18398.1 ORF142767 - 0.76 10.2 4.6 0.26 11.7 0.8 1.9 2 0 0 2 2 2 0 Clip-domain serine protease homolog masquerade Fer2_4 PF13510.6 ORF142150 - 0.11 12.6 0.0 0.36 10.9 0.0 1.8 3 0 0 3 3 3 0 2Fe-2S iron-sulfur cluster binding domain Herpes_pp85 PF04637.12 ORF141896 - 0.57 8.5 5.9 0.66 8.3 5.9 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) PurA PF04845.13 ORF140978 - 0.08 12.3 0.6 0.085 12.2 0.6 1.1 1 0 0 1 1 1 0 PurA ssDNA and RNA-binding protein SMP_2 PF10144.9 ORF140884 - 0.09 12.4 0.5 0.13 11.9 0.5 1.2 1 0 0 1 1 1 0 Bacterial virulence factor haemolysin TspO_MBR PF03073.15 ORF139551 - 0.025 14.6 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 TspO/MBR family DDE_Tnp_1_7 PF13843.6 ORF139068 - 0.11 11.7 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Transposase IS4 zf-CGNR PF11706.8 ORF138517 - 0.033 14.0 0.9 0.077 12.9 0.6 1.8 2 1 0 2 2 2 0 CGNR zinc finger zf-C3HC4_2 PF13923.6 ORF137007 - 2.4 8.1 9.2 2.3 8.1 1.7 2.7 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) zf-UDP PF14569.6 ORF137007 - 6.3 7.0 7.4 21 5.3 0.2 2.3 1 1 1 2 2 2 0 Zinc-binding RING-finger HTH_9 PF08221.11 ORF136879 - 0.017 15.2 0.1 0.028 14.5 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain PCNA_C PF02747.15 ORF136593 - 0.022 14.9 0.0 0.034 14.3 0.0 1.3 1 0 0 1 1 1 0 Proliferating cell nuclear antigen, C-terminal domain DUF261 PF03196.13 ORF136417 - 0.19 11.8 4.6 0.26 11.4 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function, DUF261 Antimicrobial12 PF08107.11 ORF136362 - 0.08 12.7 0.2 0.14 12.0 0.2 1.3 1 0 0 1 1 1 0 Pleurocidin family Docking PF08990.11 ORF136362 - 0.17 11.5 0.3 0.25 11.0 0.3 1.2 1 0 0 1 1 1 0 Erythronolide synthase docking TMEM247 PF15444.6 ORF13598 - 3.2 7.7 4.3 3.2 7.7 4.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 PAC4 PF16093.5 ORF134872 - 5.3e-07 29.7 0.0 6.6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 MIG-14_Wnt-bd PF06664.12 ORF133452 - 0.062 12.5 0.3 0.066 12.4 0.3 1.0 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion TRP PF06011.12 ORF133452 - 0.19 10.4 0.5 0.23 10.2 0.5 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Fusion_gly_K PF01621.17 ORF133452 - 0.35 9.9 3.3 0.47 9.5 3.3 1.1 1 0 0 1 1 1 0 Cell fusion glycoprotein K PIP49_N PF14875.6 ORF132026 - 0.032 14.1 0.7 0.041 13.7 0.7 1.1 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 SHP PF03579.13 ORF131837 - 0.085 12.8 1.2 0.12 12.4 1.1 1.4 1 1 0 1 1 1 0 Small hydrophobic protein DUF4769 PF15992.5 ORF131242 - 0.061 13.1 1.0 0.068 13.0 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) zf-C2H2 PF00096.26 ORF13103 - 4.3e-11 42.6 11.1 5e-07 29.8 0.9 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF13103 - 1.2e-07 31.8 0.9 1.2e-07 31.8 0.9 3.5 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF13103 - 2.3e-07 31.0 9.1 0.00025 21.6 0.6 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF13103 - 3.8e-05 23.4 3.5 0.0034 17.1 0.2 2.3 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 ORF13103 - 0.0013 19.0 1.8 0.0016 18.7 1.8 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-BED PF02892.15 ORF13103 - 0.0022 17.9 1.6 0.0022 17.9 1.6 2.0 1 1 1 2 2 2 1 BED zinc finger zf-C2HE PF16278.5 ORF13103 - 0.084 13.3 10.8 0.51 10.8 0.5 2.3 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2HC_2 PF13913.6 ORF13103 - 0.12 12.3 0.8 0.12 12.3 0.8 3.3 4 0 0 4 4 4 0 zinc-finger of a C2HC-type zf-C2H2_6 PF13912.6 ORF13103 - 0.24 11.4 9.4 0.46 10.6 1.7 2.7 2 1 0 2 2 2 0 C2H2-type zinc finger Phosducin PF02114.16 ORF129930 - 0.1 11.6 0.1 0.094 11.6 0.1 1.1 1 0 0 1 1 1 0 Phosducin CreD PF06123.12 ORF129193 - 0.1 11.4 0.9 0.11 11.3 0.9 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD DUF5463 PF17551.2 ORF129034 - 0.051 13.5 1.1 0.13 12.2 1.1 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5463) DUF5359 PF17313.2 ORF128337 - 0.17 11.9 1.9 0.28 11.2 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5359) Op_neuropeptide PF08035.11 ORF12833 - 0.11 12.4 0.2 0.19 11.6 0.2 1.4 1 0 0 1 1 1 0 Opioids neuropeptide EF-hand_7 PF13499.6 ORF128179 - 5.2e-17 62.1 3.1 6.1e-17 61.8 3.1 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF128179 - 5.8e-17 59.9 4.7 7e-10 37.8 1.2 2.2 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF128179 - 2.5e-13 49.7 2.2 1e-10 41.3 0.7 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF128179 - 4.3e-11 41.8 3.7 3.6e-05 23.3 0.2 2.5 1 1 2 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF128179 - 1.1e-09 37.4 8.0 8e-07 28.3 1.3 2.6 2 1 1 3 3 3 2 EF hand EF-hand_9 PF14658.6 ORF128179 - 0.0001 22.5 0.0 0.00014 22.1 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF128179 - 0.00015 21.6 0.4 0.00024 21.0 0.4 1.4 1 1 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF128179 - 0.015 15.6 0.0 0.019 15.3 0.0 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region POTRA_2 PF08479.11 ORF128179 - 0.076 12.9 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 POTRA domain, ShlB-type HTH_Tnp_Tc3_2 PF01498.18 ORF128179 - 0.082 13.2 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 Transposase UPF0154 PF03672.13 ORF128179 - 0.13 12.3 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) EF-hand_7 PF13499.6 ORF127297 - 5.9e-16 58.7 4.3 1.1e-11 45.0 1.6 1.7 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF127297 - 2.8e-14 51.5 3.5 4.1e-07 29.1 1.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF127297 - 6.5e-14 50.7 2.9 3.6e-06 26.2 0.7 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF127297 - 1.2e-12 46.6 4.5 6.4e-06 25.7 0.0 2.5 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF127297 - 3.7e-09 36.3 2.8 7.5e-05 22.5 0.3 2.2 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF127297 - 0.00027 21.2 0.1 0.00057 20.2 0.1 1.6 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF127297 - 0.01 15.7 0.9 3.6 7.5 0.1 2.4 2 0 0 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF127297 - 0.014 15.3 2.6 1.1 9.2 0.1 2.1 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand RelB_N PF18506.1 ORF127297 - 0.017 14.9 0.7 0.29 11.0 0.7 2.4 1 1 0 1 1 1 0 RelB Antitoxin alpha helical domain DUF1007 PF06226.13 ORF127297 - 0.035 14.1 1.3 0.62 10.0 0.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1007) NRIP1_repr_1 PF15687.5 ORF127259 - 0.029 14.0 0.2 0.04 13.6 0.2 1.2 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 1 FAINT PF04385.15 ORF127088 - 0.031 14.3 0.1 0.038 14.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function, DUF529 zf-RING-like PF08746.11 ORF126556 - 5.6 7.4 9.4 14 6.1 9.4 1.8 1 1 0 1 1 1 0 RING-like domain Pkinase PF00069.25 ORF126548 - 0.016 14.6 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain EloA-BP1 PF15870.5 ORF126245 - 0.0058 16.9 1.7 0.0065 16.7 1.7 1.0 1 0 0 1 1 1 1 ElonginA binding-protein 1 Orthopox_F7 PF05813.12 ORF126245 - 7.5 6.7 8.2 0.64 10.2 2.0 2.0 1 1 1 2 2 2 0 Orthopoxvirus F7 protein COS PF18568.1 ORF125076 - 0.13 12.2 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 TRIM C-terminal subgroup One Signature domain SAP PF02037.27 ORF124610 - 6.9e-12 44.8 0.3 9.3e-12 44.4 0.3 1.2 1 0 0 1 1 1 1 SAP domain Telomere_Sde2_2 PF13297.6 ORF124610 - 0.00016 21.2 0.1 0.00025 20.6 0.1 1.3 1 0 0 1 1 1 1 Telomere stability C-terminal PASTA PF03793.19 ORF124610 - 0.081 12.8 0.1 0.3 11.0 0.0 1.9 2 0 0 2 2 2 0 PASTA domain Ish1 PF10281.9 ORF124610 - 0.11 12.8 0.7 0.23 11.8 0.4 1.8 1 1 0 1 1 1 0 Putative stress-responsive nuclear envelope protein E1-E2_ATPase PF00122.20 ORF124434 - 0.12 11.9 0.7 0.14 11.7 0.7 1.1 1 0 0 1 1 1 0 E1-E2 ATPase MEF2_binding PF09047.10 ORF124387 - 0.016 15.1 2.8 0.067 13.0 3.1 1.9 2 0 0 2 2 2 0 MEF2 binding XRN_N PF03159.18 ORF124387 - 0.24 10.8 3.2 0.24 10.8 3.2 1.1 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus AAA_lid_4 PF17864.1 ORF12430 - 0.027 14.2 1.1 0.045 13.5 1.1 1.3 1 0 0 1 1 1 0 RuvB AAA lid domain MIF4G_like_2 PF09090.11 ORF123925 - 0.033 13.7 0.0 0.038 13.4 0.0 1.1 1 0 0 1 1 1 0 MIF4G like HlyD_D23 PF16576.5 ORF123759 - 0.077 12.2 0.0 0.089 12.0 0.0 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion ParBc PF02195.18 ORF122864 - 0.064 13.5 0.0 0.077 13.3 0.0 1.2 1 0 0 1 1 1 0 ParB-like nuclease domain EF-hand_5 PF13202.6 ORF122799 - 0.0031 16.9 0.1 0.0091 15.5 0.0 1.9 2 1 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF122799 - 0.0036 17.7 0.1 0.0044 17.4 0.1 1.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF122799 - 0.0075 15.8 0.0 0.013 15.0 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF122799 - 0.0079 16.1 0.0 0.017 15.0 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF122799 - 0.014 15.7 0.4 0.022 15.1 0.4 1.5 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Pkinase PF00069.25 ORF122799 - 0.037 13.4 0.3 0.16 11.3 0.0 2.0 2 1 0 2 2 2 0 Protein kinase domain DUF1010 PF06231.11 ORF122564 - 0.41 11.2 5.3 0.59 10.7 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1010) LLC1 PF14945.6 ORF122073 - 0.013 16.0 0.0 0.016 15.7 0.0 1.1 1 0 0 1 1 1 0 Normal lung function maintenance, Low in Lung Cancer 1 protein RPS31 PF17067.5 ORF120465 - 0.21 11.8 1.9 0.29 11.3 1.9 1.2 1 0 0 1 1 1 0 Ribosomal protein S31e MerR_1 PF13411.6 ORF120115 - 0.09 12.9 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 MerR HTH family regulatory protein CCDC14 PF15254.6 ORF119855 - 0.33 9.5 1.7 0.36 9.4 1.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 zf-CCCH_2 PF14608.6 ORF119827 - 1.6 9.3 19.2 3.6 8.2 3.3 3.2 1 1 2 3 3 3 0 RNA-binding, Nab2-type zinc finger EB PF01683.18 ORF119827 - 2.1 8.7 13.7 17 5.8 13.7 2.1 1 1 0 1 1 1 0 EB module Polysacc_deac_1 PF01522.21 ORF119123 - 0.035 14.0 0.3 0.046 13.6 0.3 1.2 1 0 0 1 1 1 0 Polysaccharide deacetylase DUF1664 PF07889.12 ORF119123 - 0.18 11.9 4.5 0.16 12.0 2.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 ORF119123 - 0.31 11.6 6.1 0.43 11.1 6.1 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region Med9 PF07544.13 ORF119123 - 0.33 11.1 6.2 3 8.0 0.4 2.1 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Neurokinin_B PF03823.14 ORF11898 - 0.065 13.3 0.1 0.15 12.2 0.1 1.6 1 0 0 1 1 1 0 Neurokinin B Ank_5 PF13857.6 ORF117651 - 0.006 16.9 0.0 0.016 15.5 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF117651 - 0.13 12.9 0.0 0.84 10.3 0.0 2.1 2 1 0 2 2 2 0 Ankyrin repeats (many copies) E1-E2_ATPase PF00122.20 ORF117379 - 0.021 14.4 0.6 0.024 14.2 0.6 1.1 1 0 0 1 1 1 0 E1-E2 ATPase DUF3748 PF12566.8 ORF117368 - 0.2 11.6 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3748) DUF647 PF04884.14 ORF116824 - 0.046 13.3 0.7 0.066 12.8 0.7 1.3 1 1 0 1 1 1 0 Vitamin B6 photo-protection and homoeostasis LELP1 PF15042.6 ORF116384 - 0.15 12.4 2.1 0.19 12.1 2.1 1.1 1 0 0 1 1 1 0 Late cornified envelope-like proline-rich protein 1 ISK_Channel PF02060.15 ORF116195 - 0.061 13.0 0.0 0.083 12.6 0.0 1.3 1 1 0 1 1 1 0 Slow voltage-gated potassium channel P5-ATPase PF12409.8 ORF116195 - 0.77 9.9 6.5 0.25 11.4 3.7 1.7 1 1 1 2 2 2 0 P5-type ATPase cation transporter DUF5359 PF17313.2 ORF115684 - 0.17 11.9 1.9 0.28 11.2 1.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5359) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks279.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks279.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks279.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks279.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:15:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_S10 PF00450.22 ORF8952 - 1.6e-105 353.9 3.2 2e-105 353.6 3.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S10 PF00450.22 ORF83880 - 1.6e-105 353.9 3.2 2e-105 353.6 3.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase MFS_1 PF07690.16 ORF75957 - 1.7e-24 86.4 22.3 2e-23 82.9 20.9 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF75957 - 7.7e-07 28.3 19.0 0.0038 16.1 4.1 3.4 2 2 1 3 3 3 3 Sugar (and other) transporter CoA_binding_3 PF13727.6 ORF75957 - 1.4 8.9 4.4 15 5.5 0.0 3.2 4 0 0 4 4 4 0 CoA-binding domain eIF-5_eIF-2B PF01873.17 ORF74625 - 9.4e-34 115.8 0.1 3.2e-33 114.1 0.1 2.0 1 0 0 1 1 1 1 Domain found in IF2B/IF5 W2 PF02020.18 ORF74625 - 4.7e-12 45.9 0.8 4.7e-12 45.9 0.8 3.8 2 1 1 3 3 3 1 eIF4-gamma/eIF5/eIF2-epsilon Dapper PF15268.6 ORF74625 - 0.059 12.2 22.1 0.074 11.9 22.1 1.1 1 0 0 1 1 1 0 Dapper Mitofilin PF09731.9 ORF74625 - 2.3 7.0 39.1 3.1 6.5 39.1 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Ndc1_Nup PF09531.10 ORF74625 - 2.4 6.8 10.4 3.4 6.2 10.4 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PRMT5 PF05185.16 ORF73263 - 0.00017 21.5 0.0 0.00035 20.5 0.0 1.5 2 0 0 2 2 2 1 PRMT5 arginine-N-methyltransferase PrmA PF06325.13 ORF73263 - 0.00069 19.1 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 ORF73263 - 0.0019 18.8 0.0 0.0038 17.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF73263 - 0.022 14.6 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 ORF73263 - 0.037 13.8 0.0 0.067 13.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain NNMT_PNMT_TEMT PF01234.17 ORF73263 - 0.049 12.8 0.0 0.082 12.1 0.0 1.3 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family Met_10 PF02475.16 ORF73263 - 0.064 13.0 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Met-10+ like-protein PsbQ PF05757.11 ORF73263 - 0.2 11.3 2.3 0.28 10.9 0.1 2.3 4 0 0 4 4 4 0 Oxygen evolving enhancer protein 3 (PsbQ) RrnaAD PF00398.20 ORF73263 - 0.23 10.5 0.0 0.36 9.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase HlyIII PF03006.20 ORF53538 - 1.4e-53 181.9 17.2 6.3e-53 179.8 17.2 1.8 1 1 0 1 1 1 1 Haemolysin-III related DUF5337 PF17272.2 ORF53538 - 0.18 11.7 0.3 0.41 10.5 0.3 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5337) SBP56 PF05694.11 ORF46548 - 7.5e-162 539.2 0.0 8.7e-162 539.0 0.0 1.0 1 0 0 1 1 1 1 56kDa selenium binding protein (SBP56) Lactonase PF10282.9 ORF46548 - 0.022 14.0 0.0 0.18 11.0 0.0 2.0 1 1 1 2 2 2 0 Lactonase, 7-bladed beta-propeller Peptidase_S10 PF00450.22 ORF37014 - 1.6e-105 353.9 3.2 2e-105 353.6 3.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Pro_sub2 PF18513.1 ORF35984 - 0.073 13.3 0.6 0.073 13.3 0.6 3.7 5 0 0 5 5 5 0 Prodomain subtilisin 2 DUF4407 PF14362.6 ORF35984 - 0.56 9.5 39.8 0.15 11.4 21.6 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Col_cuticle_N PF01484.17 ORF35984 - 4.5 7.4 6.8 23 5.2 0.1 3.8 3 1 1 4 4 4 0 Nematode cuticle collagen N-terminal domain V-ATPase_H_N PF03224.14 ORF35950 - 9.3e-34 117.1 7.8 9.3e-34 117.1 7.8 1.7 2 0 0 2 2 2 1 V-ATPase subunit H V-ATPase_H_C PF11698.8 ORF35950 - 6e-28 97.3 0.5 6e-28 97.3 0.5 3.2 3 1 0 3 3 3 1 V-ATPase subunit H DUF3361 PF11841.8 ORF35950 - 0.002 18.1 5.9 0.51 10.3 0.1 3.0 3 0 0 3 3 3 2 Domain of unknown function (DUF3361) Arm PF00514.23 ORF35950 - 0.021 14.9 0.2 49 4.2 0.0 3.7 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat IBN_N PF03810.19 ORF35950 - 0.27 11.2 2.6 5.1 7.1 0.1 3.4 3 1 1 4 4 4 0 Importin-beta N-terminal domain RTTN_N PF14726.6 ORF35950 - 0.45 11.4 3.9 1.7 9.5 1.2 2.8 2 0 0 2 2 2 0 Rotatin, an armadillo repeat protein, centriole functioning Peptidase_S10 PF00450.22 ORF33076 - 1.6e-105 353.9 3.2 2e-105 353.6 3.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase MscS_TM PF12794.7 ORF30879 - 0.8 8.5 6.3 1.4 7.7 6.3 1.3 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF3377 PF11857.8 ORF30287 - 0.057 13.4 0.0 0.24 11.3 0.0 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) DUF5527 PF17665.1 ORF30287 - 0.061 12.9 2.8 0.077 12.5 0.1 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5527) Nup54 PF13874.6 ORF30287 - 0.16 12.1 1.7 0.29 11.2 1.7 1.3 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 zf-RanBP PF00641.18 ORF2926 - 3.2 7.2 9.7 6.7 6.1 2.3 2.4 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others Peptidase_S10 PF00450.22 ORF26325 - 2.8e-105 353.1 3.6 3.3e-105 352.9 3.6 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase UCH PF00443.29 ORF24662 - 1.6e-64 217.9 1.3 1.6e-64 217.9 1.3 1.5 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF24662 - 1.3e-19 71.0 0.3 1.3e-19 71.0 0.3 2.4 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase zf-C2H2 PF00096.26 ORF24662 - 4.5 7.9 9.2 32 5.2 4.2 3.8 2 1 0 2 2 2 0 Zinc finger, C2H2 type PGM_PMM_I PF02878.16 ORF1761 - 1.4e-32 112.3 0.0 6.9e-32 110.0 0.0 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 ORF1761 - 1.9e-25 89.3 0.0 2.9e-25 88.7 0.0 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 ORF1761 - 2.3e-22 79.6 0.1 4.3e-22 78.7 0.1 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 ORF1761 - 5e-09 36.2 0.1 1.2e-08 35.0 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNA_pol_A_exo1 PF01612.20 ORF151054 - 4.4e-24 85.1 0.9 8.4e-24 84.2 0.9 1.4 1 0 0 1 1 1 1 3'-5' exonuclease Asp PF00026.23 ORF149431 - 3.5e-21 76.0 0.5 4.9e-21 75.5 0.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF149431 - 0.12 12.1 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal XhlA PF10779.9 ORF144369 - 0.32 11.2 2.4 25 5.2 0.0 3.4 3 0 0 3 3 3 0 Haemolysin XhlA Myb_DNA-bind_6 PF13921.6 ORF144369 - 0.92 9.8 5.0 1.9 8.8 0.2 3.2 3 0 0 3 3 3 0 Myb-like DNA-binding domain TF_AP-2 PF03299.14 ORF144369 - 2.3 8.2 10.1 0.057 13.4 1.2 2.2 2 1 0 2 2 2 0 Transcription factor AP-2 Pns11_12 PF17464.2 ORF144369 - 6.9 6.3 17.8 16 5.2 17.8 1.7 1 0 0 1 1 1 0 Non-structural protein 11 and 12 Chloroa_b-bind PF00504.21 ORF142973 - 1e-66 224.4 0.2 5e-33 114.9 0.0 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein Asp PF00026.23 ORF138232 - 7.8e-34 117.5 5.2 1.8e-33 116.3 5.2 1.5 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF138232 - 2.7e-06 27.7 0.4 7.3e-06 26.3 0.2 1.8 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal Chloroa_b-bind PF00504.21 ORF123250 - 1e-66 224.4 0.2 5e-33 114.9 0.0 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein GDI PF00996.18 ORF113584 - 9.5e-200 663.7 0.0 1.1e-199 663.4 0.0 1.0 1 0 0 1 1 1 1 GDP dissociation inhibitor GDI PF00996.18 ORF103961 - 9.5e-200 663.7 0.0 1.1e-199 663.4 0.0 1.0 1 0 0 1 1 1 1 GDP dissociation inhibitor DUF4055 PF13264.6 NODE_10152_length_1365_cov_244.068421_g7403_i1forward_frame_1 - 0.27 11.4 11.8 0.1 12.7 2.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4055) Kelch_4 PF13418.6 ORF96677 - 2.1e-12 46.8 8.5 0.0036 17.3 0.4 5.1 4 1 0 4 4 4 3 Galactose oxidase, central domain EGF_2 PF07974.13 ORF96677 - 2.9e-08 33.9 70.0 0.00022 21.5 11.4 4.7 4 0 0 4 4 4 3 EGF-like domain Kelch_3 PF13415.6 ORF96677 - 4.8e-08 33.1 6.6 0.0013 18.9 0.9 4.5 4 1 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF96677 - 7.8e-08 32.1 6.1 0.00013 21.8 0.0 4.4 4 0 0 4 4 4 2 Kelch motif EGF_Tenascin PF18720.1 ORF96677 - 4.3e-05 23.4 13.3 4.3e-05 23.4 13.3 4.9 4 1 0 4 4 4 3 Tenascin EGF domain Kelch_6 PF13964.6 ORF96677 - 0.00027 21.1 15.7 0.0016 18.6 0.1 5.0 5 1 0 5 5 5 1 Kelch motif Kelch_2 PF07646.15 ORF96677 - 0.052 13.5 2.6 2 8.5 0.0 3.8 4 1 0 4 4 4 0 Kelch motif Kelch_1 PF01344.25 ORF96677 - 0.15 11.7 12.2 0.16 11.5 0.1 4.3 4 0 0 4 4 4 0 Kelch motif TIP49 PF06068.13 ORF89714 - 1.5e-167 557.2 0.8 1.9e-167 556.8 0.8 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain TIP49_C PF17856.1 ORF89714 - 2.1e-24 85.5 0.3 5.7e-24 84.0 0.3 1.8 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 ORF89714 - 2.7e-11 44.0 0.2 1.3e-07 32.1 0.1 2.9 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 ORF89714 - 6.7e-10 38.9 0.4 2.8e-06 27.2 0.1 2.5 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF89714 - 1.2e-05 25.6 0.3 0.058 13.7 0.3 2.8 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF89714 - 0.00013 22.0 0.1 0.043 13.8 0.0 2.7 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 ORF89714 - 0.00035 20.9 0.6 0.27 11.5 0.2 2.4 2 0 0 2 2 2 2 AAA domain DnaB_C PF03796.15 ORF89714 - 0.0006 19.2 0.0 0.0016 17.8 0.0 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain Mg_chelatase PF01078.21 ORF89714 - 0.00075 18.9 0.2 0.046 13.1 0.1 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 ORF89714 - 0.00089 19.7 0.0 0.011 16.1 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain Sigma54_activat PF00158.26 ORF89714 - 0.0013 18.4 0.1 1.4 8.6 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_28 PF13521.6 ORF89714 - 0.0018 18.5 0.0 0.004 17.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 ORF89714 - 0.0032 16.8 0.3 0.0084 15.4 0.2 1.7 2 0 0 2 2 2 1 Zeta toxin ResIII PF04851.15 ORF89714 - 0.0036 17.3 0.8 0.18 11.8 0.0 2.6 3 0 0 3 3 2 1 Type III restriction enzyme, res subunit AAA_17 PF13207.6 ORF89714 - 0.0037 17.7 0.1 0.2 12.1 0.0 3.0 2 1 0 3 3 3 1 AAA domain AAA_25 PF13481.6 ORF89714 - 0.0065 16.1 0.1 0.012 15.2 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF89714 - 0.011 16.2 0.0 0.032 14.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF89714 - 0.015 15.3 0.0 3.4 7.7 0.0 2.6 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.9 ORF89714 - 0.016 14.5 0.0 0.039 13.2 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) IstB_IS21 PF01695.17 ORF89714 - 0.041 13.6 0.4 0.096 12.4 0.1 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF89714 - 0.06 12.8 0.2 0.25 10.9 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region TsaE PF02367.17 ORF89714 - 0.12 12.4 0.0 0.32 11.0 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF948 PF06103.11 ORF83935 - 0.0038 17.5 0.9 0.01 16.1 0.2 2.1 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) DUF725 PF05267.12 ORF83935 - 0.017 15.1 0.2 0.051 13.6 0.2 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF725) Med9 PF07544.13 ORF83935 - 0.02 14.9 1.0 2.7 8.1 0.1 3.4 1 1 2 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 WASH_WAHD PF11945.8 ORF83935 - 0.021 14.4 2.5 1.4 8.4 0.2 2.2 1 1 0 2 2 2 0 WAHD domain of WASH complex DUF1664 PF07889.12 ORF83935 - 0.045 13.8 4.3 0.42 10.7 2.6 2.8 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) Snapin_Pallidin PF14712.6 ORF83935 - 0.046 14.1 0.3 0.046 14.1 0.3 2.4 3 1 0 3 3 2 0 Snapin/Pallidin Baculo_PEP_C PF04513.12 ORF83935 - 0.12 12.4 0.4 1.8 8.6 0.1 2.2 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus BLOC1_2 PF10046.9 ORF83935 - 0.18 12.1 2.9 0.49 10.7 1.2 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SHE3 PF17078.5 ORF83935 - 0.18 11.5 5.3 0.26 11.0 5.3 1.3 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 Spore_III_AF PF09581.10 ORF83935 - 0.46 10.5 4.1 0.27 11.2 2.1 1.6 2 0 0 2 2 2 0 Stage III sporulation protein AF (Spore_III_AF) ING PF12998.7 ORF83935 - 0.54 10.9 6.6 0.11 13.1 2.1 2.2 4 0 0 4 4 1 0 Inhibitor of growth proteins N-terminal histone-binding Fmp27_WPPW PF10359.9 ORF83935 - 0.93 8.3 6.9 0.57 9.0 5.0 1.5 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Jnk-SapK_ap_N PF09744.9 ORF83935 - 2.2 8.5 13.0 0.33 11.2 7.6 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DUF1043 PF06295.12 ORF83935 - 2.4 8.2 5.7 1 9.4 0.6 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1043) DUF16 PF01519.16 ORF83935 - 3 8.4 5.1 2.2 8.8 1.3 2.4 2 1 1 3 3 3 0 Protein of unknown function DUF16 UPF0242 PF06785.11 ORF83935 - 7.7 6.6 11.5 2e+02 2.0 11.5 2.2 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Trypsin_2 PF13365.6 ORF75101 - 6.6e-30 105.0 0.1 1.1e-29 104.3 0.1 1.3 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ PF00595.24 ORF75101 - 1.1e-29 102.6 7.5 1.6e-15 57.2 0.0 3.3 3 0 0 3 3 3 2 PDZ domain PDZ_2 PF13180.6 ORF75101 - 1.8e-28 98.7 0.4 2.8e-17 62.8 0.0 2.6 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF75101 - 6.5e-20 70.7 8.1 8.2e-10 38.4 0.0 3.2 4 0 0 4 4 4 2 PDZ domain Trypsin PF00089.26 ORF75101 - 2.9e-16 60.0 0.0 4.8e-16 59.2 0.0 1.2 1 0 0 1 1 1 1 Trypsin Tricorn_PDZ PF14685.6 ORF75101 - 0.00014 21.8 0.4 0.14 12.1 0.0 2.9 2 0 0 2 2 2 2 Tricorn protease PDZ domain DUF3394 PF11874.8 ORF75101 - 0.0029 17.3 0.0 0.012 15.3 0.0 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF3394) GRASP55_65 PF04495.14 ORF75101 - 0.0036 17.6 0.0 0.029 14.7 0.0 2.1 1 1 1 2 2 2 1 GRASP55/65 PDZ-like domain Peptidase_S46 PF10459.9 ORF75101 - 0.009 14.7 0.2 0.19 10.3 0.7 2.0 2 0 0 2 2 2 1 Peptidase S46 PDZ_1 PF12812.7 ORF75101 - 0.018 15.0 0.0 0.25 11.4 0.0 2.4 2 0 0 2 2 2 0 PDZ-like domain Complex1_51K PF01512.17 ORF75101 - 0.11 12.4 0.0 0.7 9.8 0.1 2.1 2 0 0 2 2 2 0 Respiratory-chain NADH dehydrogenase 51 Kd subunit LSM PF01423.22 ORF75101 - 0.12 12.1 0.0 0.3 10.8 0.0 1.6 1 0 0 1 1 1 0 LSM domain Inositol_P PF00459.25 ORF73015 - 2e-19 70.1 0.0 4.2e-19 69.1 0.0 1.5 1 1 0 1 1 1 1 Inositol monophosphatase family GatB_Yqey PF02637.18 ORF73015 - 0.1 12.4 0.3 0.2 11.6 0.3 1.4 1 0 0 1 1 1 0 GatB domain ACT_7 PF13840.6 ORF71848 - 0.17 11.7 0.2 0.49 10.2 0.0 1.8 2 0 0 2 2 2 0 ACT domain UCH PF00443.29 ORF70585 - 1.4e-28 100.1 0.0 1.4e-28 100.1 0.0 2.2 1 1 1 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF70585 - 1.6e-15 57.6 16.6 4.5e-14 52.8 16.6 2.7 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase AAA_lid_11 PF18198.1 ORF70585 - 0.029 14.2 0.3 0.069 13.0 0.3 1.7 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain Myb_DNA-binding PF00249.31 ORF64747 - 1.5e-16 60.3 0.1 4.5e-09 36.4 0.0 2.5 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF64747 - 1.2e-09 38.3 0.3 4.1e-05 23.7 0.0 3.0 2 1 1 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF64747 - 0.026 14.4 0.0 0.026 14.4 0.0 2.5 2 1 0 2 2 2 0 Myb DNA-binding like La PF05383.17 ORF56335 - 2.3e-15 56.4 0.1 3.9e-15 55.6 0.1 1.4 1 0 0 1 1 1 1 La domain Torus PF16131.5 ORF56335 - 6.2e-05 23.6 0.1 0.00017 22.3 0.1 1.7 2 0 0 2 2 2 1 Torus domain RNase_T PF00929.24 ORF56335 - 9.4e-05 23.0 0.0 0.00079 20.0 0.0 2.0 1 1 0 1 1 1 1 Exonuclease zf-CCCH PF00642.24 ORF56335 - 0.017 15.0 1.7 0.035 14.0 1.7 1.6 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF56335 - 0.068 13.2 3.1 0.15 12.2 3.1 1.6 1 0 0 1 1 1 0 Zinc finger domain Jacalin PF01419.17 ORF5013 - 6.7e-16 58.4 10.8 1.3e-10 41.3 2.2 2.7 2 1 0 2 2 2 2 Jacalin-like lectin domain Lebercilin PF15619.6 ORF43190 - 0.0011 18.6 36.8 0.14 11.8 7.4 3.4 2 1 0 3 3 3 3 Ciliary protein causing Leber congenital amaurosis disease Snapin_Pallidin PF14712.6 ORF43190 - 0.0093 16.4 19.7 0.51 10.8 0.7 3.9 3 0 0 3 3 3 2 Snapin/Pallidin CENP-F_leu_zip PF10473.9 ORF43190 - 0.011 15.8 36.9 0.034 14.2 9.7 3.4 2 1 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spectrin_like PF18373.1 ORF43190 - 0.035 14.2 1.4 0.1 12.7 0.3 2.5 2 0 0 2 2 2 0 Spectrin like domain DUF948 PF06103.11 ORF43190 - 0.039 14.2 8.6 7.3 6.9 0.0 4.1 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) MbeD_MobD PF04899.12 ORF43190 - 0.044 13.9 4.4 0.16 12.1 0.7 3.0 2 1 1 3 3 3 0 MbeD/MobD like DUF3450 PF11932.8 ORF43190 - 0.11 11.8 17.8 0.075 12.3 5.7 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF3450) Lge1 PF11488.8 ORF43190 - 0.37 11.0 15.3 0.034 14.3 8.7 2.7 2 1 0 2 2 2 0 Transcriptional regulatory protein LGE1 SlyX PF04102.12 ORF43190 - 0.66 10.6 23.0 3.9 8.2 3.0 4.7 4 1 1 5 5 4 0 SlyX DUF1664 PF07889.12 ORF43190 - 0.83 9.7 19.1 0.52 10.4 2.8 4.3 1 1 1 4 4 4 0 Protein of unknown function (DUF1664) ATG16 PF08614.11 ORF43190 - 0.88 9.8 34.3 0.32 11.2 4.0 3.9 2 2 0 3 3 3 0 Autophagy protein 16 (ATG16) FUSC PF04632.12 ORF43190 - 0.95 7.9 4.8 0.88 8.0 3.8 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein family L31 PF09784.9 ORF43190 - 2.1 8.8 5.6 0.79 10.2 0.8 2.7 2 1 0 2 2 2 0 Mitochondrial ribosomal protein L31 Baculo_PEP_C PF04513.12 ORF43190 - 2.4 8.2 9.4 0.92 9.5 1.8 3.3 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4988 PF16378.5 ORF43190 - 2.6 7.7 6.7 35 4.0 0.8 4.0 2 1 3 5 5 5 0 Domain of unknown function DUF4337 PF14235.6 ORF43190 - 2.8 8.1 5.6 1.1 9.3 1.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) Tropomyosin_1 PF12718.7 ORF43190 - 3.6 7.7 37.1 0.32 11.1 8.2 4.4 2 2 1 3 3 3 0 Tropomyosin like Jnk-SapK_ap_N PF09744.9 ORF43190 - 4.8 7.4 32.9 1 9.6 11.4 3.4 1 1 1 3 3 3 0 JNK_SAPK-associated protein-1 DivIC PF04977.15 ORF43190 - 5 7.0 30.5 0.4 10.5 4.1 5.5 3 2 2 5 5 5 0 Septum formation initiator SDH_alpha PF03313.15 ORF24732 - 1.3e-95 320.0 10.1 1.7e-95 319.6 10.1 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain SDH_beta PF03315.15 ORF24732 - 2.2e-56 190.6 0.1 4.7e-56 189.5 0.1 1.6 1 0 0 1 1 1 1 Serine dehydratase beta chain MmgE_PrpD PF03972.14 ORF24732 - 0.029 12.9 3.2 0.047 12.2 3.2 1.3 1 0 0 1 1 1 0 MmgE/PrpD family CT_C_D PF02682.16 ORF24732 - 0.063 13.0 0.0 0.98 9.1 0.0 2.6 1 1 1 2 2 2 0 Carboxyltransferase domain, subdomain C and D SAP PF02037.27 ORF24732 - 0.067 13.0 0.1 0.22 11.3 0.0 1.9 2 0 0 2 2 2 0 SAP domain MFS_1 PF07690.16 ORF21265 - 2.6e-34 118.7 57.2 9.5e-24 84.0 25.9 2.6 1 1 2 3 3 3 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF21265 - 3.3e-12 46.0 15.9 3.3e-12 46.0 15.9 3.4 2 2 1 4 4 4 1 Sugar (and other) transporter MFS_4 PF06779.14 ORF21265 - 1.4e-07 31.2 38.2 7.7e-07 28.7 38.2 2.1 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB OATP PF03137.20 ORF21265 - 0.00021 19.7 4.5 0.00021 19.7 4.5 2.5 4 0 0 4 4 4 1 Organic Anion Transporter Polypeptide (OATP) family MtrD PF04207.12 ORF146521 - 0.016 14.9 0.8 0.027 14.2 0.8 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit D Inositol_P PF00459.25 ORF132900 - 2e-19 70.1 0.0 4.2e-19 69.1 0.0 1.5 1 1 0 1 1 1 1 Inositol monophosphatase family GatB_Yqey PF02637.18 ORF132900 - 0.1 12.4 0.3 0.2 11.6 0.3 1.4 1 0 0 1 1 1 0 GatB domain G_glu_transpept PF01019.21 ORF119201 - 7.5e-91 305.4 0.1 9.1e-91 305.1 0.1 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase Na_H_Exchanger PF00999.21 ORF117491 - 3.1e-53 180.9 37.2 4e-53 180.6 37.2 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 ORF117491 - 1.6e-25 89.6 0.3 2.8e-25 88.9 0.3 1.4 1 0 0 1 1 1 1 TrkA-N domain ApbA PF02558.16 ORF117491 - 0.012 15.3 0.0 0.028 14.1 0.0 1.6 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA B12-binding_2 PF02607.17 ORF117491 - 0.058 13.8 1.2 0.093 13.2 0.0 2.0 2 0 0 2 2 2 0 B12 binding domain NAD_binding_2 PF03446.15 ORF117491 - 0.068 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Kinesin PF00225.23 ORF1153 - 8.9e-63 212.2 0.1 8.9e-63 212.2 0.1 1.9 2 1 1 3 3 3 1 Kinesin motor domain AMP-binding_C_2 PF14535.6 ORF1153 - 0.056 13.7 6.2 0.081 13.3 4.6 2.1 2 0 0 2 2 2 0 AMP-binding enzyme C-terminal domain DUF2666 PF10869.8 ORF1153 - 0.095 12.9 11.1 0.71 10.1 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2666) DUF2443 PF10398.9 ORF1153 - 0.14 12.2 4.2 4.2 7.5 0.5 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2443) Asp PF00026.23 ORF106465 - 3.2e-48 164.8 6.3 3.9e-48 164.5 6.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF106465 - 9.2e-08 32.5 2.8 6.8e-06 26.4 0.3 2.3 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 ORF106465 - 0.02 15.6 0.7 0.26 12.0 0.0 2.7 3 0 0 3 3 3 0 Aspartyl protease SHMT PF00464.19 ORF97867 - 2.7e-167 556.4 0.0 3.5e-167 556.0 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase DegT_DnrJ_EryC1 PF01041.17 ORF97867 - 8.1e-06 25.4 0.0 1.3e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 ORF97867 - 0.00049 19.5 0.0 0.0012 18.2 0.1 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 ORF97867 - 0.0025 17.1 0.0 0.0039 16.4 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Abhydrolase_1 PF00561.20 ORF82315 - 4.7e-18 65.8 0.0 7.4e-18 65.1 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF82315 - 0.00014 22.6 0.1 0.00021 22.0 0.1 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 ORF82315 - 0.00054 19.7 0.0 0.00072 19.3 0.0 1.3 1 1 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 ORF82315 - 0.082 12.2 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Acyl-CoA_dh_1 PF00441.24 ORF80587 - 1.1e-37 129.5 0.6 1.1e-37 129.5 0.6 1.9 1 1 1 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF80587 - 1.9e-24 85.7 0.0 9.5e-24 83.4 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF80587 - 2.1e-13 50.9 0.1 6.5e-13 49.3 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF80587 - 5.2e-05 23.5 0.0 0.0001 22.6 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Citrate_synt PF00285.21 ORF74303 - 5.3e-132 440.2 0.0 6.3e-132 440.0 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain MnmE_helical PF12631.7 ORF66003 - 3.8e-61 206.8 1.9 4.6e-61 206.6 1.9 1.1 1 0 0 1 1 1 1 MnmE helical domain TrmE_N PF10396.9 ORF66003 - 1.9e-35 121.6 0.0 7.3e-35 119.8 0.0 2.0 2 0 0 2 2 2 1 GTP-binding protein TrmE N-terminus MMR_HSR1 PF01926.23 ORF66003 - 1.1e-25 90.0 0.0 8.1e-25 87.1 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF66003 - 2.2e-08 33.8 0.0 8.6e-08 31.9 0.0 1.9 1 1 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF66003 - 7e-05 22.9 0.0 0.00073 19.6 0.0 2.2 1 1 1 2 2 2 1 Dynamin family Ras PF00071.22 ORF66003 - 0.00014 21.5 0.0 0.00025 20.7 0.0 1.4 1 0 0 1 1 1 1 Ras family RsgA_GTPase PF03193.16 ORF66003 - 0.00019 21.4 0.0 0.0064 16.4 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase AIG1 PF04548.16 ORF66003 - 0.00032 20.1 0.0 0.00058 19.3 0.0 1.4 1 0 0 1 1 1 1 AIG1 family ABC_tran PF00005.27 ORF66003 - 0.0011 19.5 0.0 0.0023 18.5 0.0 1.6 1 0 0 1 1 1 1 ABC transporter Roc PF08477.13 ORF66003 - 0.0016 18.6 0.0 0.0039 17.4 0.0 1.6 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA_28 PF13521.6 ORF66003 - 0.0047 17.2 0.1 0.011 16.0 0.1 1.6 1 0 0 1 1 1 1 AAA domain Arf PF00025.21 ORF66003 - 0.0071 15.8 0.0 0.016 14.6 0.0 1.6 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF66003 - 0.033 13.6 0.0 0.061 12.8 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF66003 - 0.039 13.3 0.0 0.09 12.1 0.0 1.6 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF66003 - 0.14 11.7 0.0 4.8 6.7 0.0 2.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain TMEM131_like PF12371.8 ORF64094 - 2.2e-05 24.6 1.7 0.64 10.3 0.0 3.7 4 0 0 4 4 4 2 Transmembrane protein 131-like ASH PF15780.5 ORF64094 - 2.7e-05 24.3 0.6 0.43 10.8 0.0 4.3 4 0 0 4 4 4 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Asp PF00026.23 ORF64014 - 6.5e-35 121.1 0.9 9.2e-35 120.6 0.9 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF64014 - 7.1e-07 29.6 1.2 2.7e-06 27.8 1.2 2.0 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal DUF2207 PF09972.9 ORF64014 - 0.0059 15.4 0.4 0.043 12.6 0.0 2.1 2 0 0 2 2 2 1 Predicted membrane protein (DUF2207) Aminotran_3 PF00202.21 ORF58178 - 6.3e-122 407.1 0.0 7.8e-122 406.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III PKD_channel PF08016.12 ORF53463 - 2.2e-22 79.4 20.9 2.8e-22 79.0 20.9 1.1 1 0 0 1 1 1 1 Polycystin cation channel DVL PF08137.12 ORF53463 - 0.58 10.1 4.1 1.9 8.4 4.1 2.0 1 0 0 1 1 1 0 DVL family RAP PF08373.10 ORF51882 - 7.6e-10 38.7 0.0 1.4e-09 37.9 0.0 1.5 1 0 0 1 1 1 1 RAP domain PRiA4_ORF3 PF07929.11 ORF51882 - 0.057 13.1 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Plasmid pRiA4b ORF-3-like protein Acyl-CoA_dh_1 PF00441.24 ORF47646 - 1.1e-37 129.5 0.6 1.1e-37 129.5 0.6 1.9 1 1 1 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF47646 - 1.9e-24 85.7 0.0 9.5e-24 83.4 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF47646 - 2.1e-13 50.9 0.1 6.5e-13 49.3 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF47646 - 5.2e-05 23.5 0.0 0.0001 22.6 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_1 PF00441.24 ORF45284 - 1.1e-37 129.5 0.6 1.1e-37 129.5 0.6 1.9 1 1 1 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF45284 - 1.9e-24 85.7 0.0 9.5e-24 83.4 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF45284 - 2.1e-13 50.9 0.1 6.5e-13 49.3 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF45284 - 5.2e-05 23.5 0.0 0.0001 22.6 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain SIS PF01380.22 ORF44066 - 1.7e-46 157.3 0.1 1.1e-23 83.5 0.0 2.2 2 0 0 2 2 2 2 SIS domain SIS_2 PF13580.6 ORF44066 - 0.0011 19.0 0.0 0.0033 17.5 0.0 1.8 1 1 0 1 1 1 1 SIS domain DUF1363 PF07101.11 ORF44066 - 0.11 12.7 0.0 4.4 7.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1363) Sulfatase PF00884.23 ORF41195 - 1.6e-20 73.7 0.0 2.4e-20 73.2 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 ORF41195 - 0.00036 21.3 0.2 0.0011 19.7 0.0 1.8 2 0 0 2 2 2 1 C-terminal region of aryl-sulfatase DUF1501 PF07394.12 ORF41195 - 0.0022 17.1 0.0 0.0037 16.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1501) DUF4976 PF16347.5 ORF41195 - 0.016 15.4 0.2 0.047 13.9 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4976) Phosphodiest PF01663.22 ORF41195 - 0.057 13.0 0.0 0.1 12.1 0.0 1.4 2 0 0 2 2 2 0 Type I phosphodiesterase / nucleotide pyrophosphatase Citrate_synt PF00285.21 ORF39349 - 5.3e-132 440.2 0.0 6.3e-132 440.0 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Asp PF00026.23 ORF35952 - 6e-32 111.3 1.6 1.1e-31 110.4 1.6 1.4 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF35952 - 4.9e-07 30.1 0.4 8.2e-07 29.4 0.1 1.6 2 0 0 2 2 2 1 Xylanase inhibitor N-terminal DUF2207 PF09972.9 ORF35952 - 0.029 13.2 0.3 0.27 10.0 0.0 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Aldedh PF00171.22 ORF31860 - 1.2e-76 258.2 0.0 1.4e-76 257.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 ORF31860 - 8.3e-06 25.1 0.0 1.2e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) Phosphorylase PF00343.20 ORF23959 - 3.5e-203 676.8 0.1 4e-203 676.6 0.1 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase SAM_1 PF00536.30 ORF20912 - 1.3e-09 38.3 0.0 2.1e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 ORF20912 - 8.7e-09 35.4 0.1 1.7e-08 34.5 0.1 1.4 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_PNT PF02198.16 ORF20912 - 0.036 14.0 0.0 0.075 13.0 0.0 1.5 1 1 0 1 1 1 0 Sterile alpha motif (SAM)/Pointed domain Peptidase_S28 PF05577.12 ORF18068 - 4.9e-78 262.9 3.5 2.1e-77 260.8 3.5 1.7 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S9 PF00326.21 ORF18068 - 0.0023 17.4 0.1 0.0038 16.7 0.1 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF18068 - 0.088 12.4 0.0 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 alpha/beta hydrolase fold Cep57_CLD PF14073.6 ORF17702 - 0.043 13.8 0.6 0.043 13.8 0.6 1.7 2 0 0 2 2 2 0 Centrosome localisation domain of Cep57 Fungal_TACC PF12709.7 ORF17702 - 0.14 12.7 0.8 0.29 11.6 0.8 1.4 1 0 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF948 PF06103.11 ORF17702 - 0.14 12.4 0.2 0.76 10.1 0.2 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Lzipper-MIP1 PF14389.6 ORF17702 - 0.16 12.3 0.9 0.34 11.2 0.9 1.5 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 UPF0182 PF03699.13 ORF17702 - 0.18 9.9 3.7 0.49 8.5 0.3 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0182) DivIC PF04977.15 ORF17702 - 1 9.2 4.1 1.5 8.6 2.2 2.2 2 0 0 2 2 2 0 Septum formation initiator Ax_dynein_light PF10211.9 ORF17702 - 1.5 8.7 5.9 0.18 11.7 0.9 1.8 2 0 0 2 2 2 0 Axonemal dynein light chain Asp PF00026.23 ORF15618 - 2.7e-41 142.0 4.8 3.3e-41 141.7 4.8 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF15618 - 1.6e-05 25.3 0.3 5.3e-05 23.5 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal Acyl-CoA_dh_1 PF00441.24 ORF143110 - 1.1e-37 129.5 0.6 1.1e-37 129.5 0.6 1.9 1 1 1 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF143110 - 1.9e-24 85.7 0.0 9.5e-24 83.4 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF143110 - 2.1e-13 50.9 0.1 6.5e-13 49.3 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF143110 - 5.2e-05 23.5 0.0 0.0001 22.6 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Asp PF00026.23 ORF12180 - 3.4e-34 118.7 0.8 5.5e-34 118.0 0.8 1.3 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF12180 - 6.9e-07 29.7 1.2 2.7e-06 27.8 1.2 2.0 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal DUF2207 PF09972.9 ORF12180 - 0.0073 15.1 0.3 0.054 12.3 0.0 2.0 2 0 0 2 2 2 1 Predicted membrane protein (DUF2207) Asp PF00026.23 ORF119366 - 2.7e-41 142.0 4.8 3.3e-41 141.7 4.8 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF119366 - 1.6e-05 25.3 0.3 5.3e-05 23.5 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal MFS_1 PF07690.16 ORF114141 - 2.9e-34 118.5 35.3 1.8e-23 83.1 9.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF114141 - 3.9e-09 35.9 24.1 0.00017 20.6 6.7 2.1 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 ORF114141 - 2.8e-07 29.8 11.8 6.5e-05 22.0 1.4 2.2 1 1 1 2 2 2 2 MFS_1 like family MFS_4 PF06779.14 ORF114141 - 3e-05 23.5 28.8 4.7e-05 22.8 28.8 1.2 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB PUCC PF03209.15 ORF114141 - 0.0024 17.0 11.8 0.0024 17.0 11.8 1.5 1 1 0 1 1 1 1 PUCC protein DUF3318 PF11780.8 ORF114141 - 0.048 13.6 0.1 0.19 11.7 0.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3318) ATG22 PF11700.8 ORF114141 - 0.1 11.2 7.5 0.079 11.6 1.5 2.4 2 0 0 2 2 2 0 Vacuole effluxer Atg22 like DUF4890 PF16231.5 ORF111612 - 1.5 9.3 8.2 0.15 12.5 2.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4890) Fer4_11 PF13247.6 ORF103907 - 2.6e-23 82.1 10.7 2.6e-23 82.1 10.7 3.6 4 1 0 4 4 4 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF103907 - 2.2e-10 41.0 27.6 1.1e-07 32.3 8.0 6.0 3 2 1 4 4 4 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF103907 - 1.7e-09 37.7 23.9 6.6e-06 26.2 6.6 5.7 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF103907 - 3.7e-08 33.4 51.4 2.4e-05 24.4 10.1 6.2 5 3 2 7 7 7 3 4Fe-4S dicluster domain Fer4 PF00037.27 ORF103907 - 1.2e-07 31.2 13.8 1.2e-05 24.9 3.2 6.6 7 0 0 7 7 7 4 4Fe-4S binding domain Fer4_6 PF12837.7 ORF103907 - 9.8e-07 28.6 25.1 0.00067 19.6 4.6 6.6 7 1 0 7 7 7 3 4Fe-4S binding domain Fer4_2 PF12797.7 ORF103907 - 0.00037 20.4 12.4 0.0017 18.4 3.1 8.5 8 2 0 8 8 8 3 4Fe-4S binding domain TAT_signal PF10518.9 ORF103907 - 0.0052 16.6 0.7 0.011 15.5 0.7 1.5 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Fer4_3 PF12798.7 ORF103907 - 0.032 15.2 2.2 0.032 15.2 2.2 8.6 9 3 0 9 9 9 0 4Fe-4S binding domain Fer4_4 PF12800.7 ORF103907 - 0.034 14.6 3.2 0.034 14.6 3.2 9.0 9 2 0 9 9 9 0 4Fe-4S binding domain Aa_trans PF01490.18 ORF98616 - 2.2e-27 95.8 18.8 2.2e-27 95.8 18.8 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein DUF2070 PF09843.9 ORF98616 - 4.5 5.4 7.1 0.13 10.5 0.4 1.8 2 1 0 2 2 2 0 Predicted membrane protein (DUF2070) Peptidase_S10 PF00450.22 ORF98487 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF98487 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Peptidase_S10 PF00450.22 ORF95079 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF95079 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family DOMON PF03351.17 ORF83644 - 7.6e-10 39.1 0.0 1e-09 38.7 0.0 1.1 1 0 0 1 1 1 1 DOMON domain Aa_trans PF01490.18 ORF8098 - 1.8e-26 92.8 18.3 1.8e-26 92.8 18.3 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein Peptidase_S10 PF00450.22 ORF76608 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF76608 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Peptidase_S10 PF00450.22 ORF75627 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF75627 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Pkinase PF00069.25 ORF68880 - 2.5e-65 220.5 0.0 3.3e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF68880 - 7.1e-31 107.4 0.0 9.6e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF68880 - 2.2e-05 23.9 0.0 3.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF68880 - 0.00044 19.7 0.0 0.0024 17.2 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Peptidase_S10 PF00450.22 ORF6788 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF6788 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Peptidase_S10 PF00450.22 ORF59768 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF59768 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Kinesin PF00225.23 ORF5684 - 6.1e-55 186.5 0.0 8.2e-55 186.0 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF5684 - 0.041 13.8 0.0 0.069 13.1 0.0 1.3 1 0 0 1 1 1 0 Microtubule binding Asp PF00026.23 ORF54255 - 4e-40 138.2 1.2 4.9e-40 137.9 1.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF54255 - 1e-05 25.8 1.3 4.4e-05 23.8 0.1 2.3 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF54255 - 0.077 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal EF-hand_7 PF13499.6 ORF48855 - 0.03 14.8 1.0 0.15 12.5 0.1 2.7 3 0 0 3 3 3 0 EF-hand domain pair KN_motif PF12075.8 ORF48855 - 0.088 12.6 0.4 3 7.7 0.1 3.3 3 0 0 3 3 3 0 KN motif EF-hand_6 PF13405.6 ORF48855 - 0.096 12.7 0.1 0.36 10.9 0.1 2.0 1 0 0 1 1 1 0 EF-hand domain DPM2 PF07297.12 ORF4573 - 0.036 14.4 0.3 0.16 12.3 0.3 2.2 1 0 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) MTABC_N PF16185.5 ORF4573 - 0.056 12.9 1.3 0.17 11.4 1.0 1.9 2 0 0 2 2 2 0 Mitochondrial ABC-transporter N-terminal five TM region Asp PF00026.23 ORF44074 - 1.2e-40 139.9 1.0 1.5e-40 139.6 1.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF44074 - 1e-05 25.8 1.3 4.4e-05 23.8 0.1 2.3 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF44074 - 0.079 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Asp PF00026.23 ORF41702 - 3.9e-42 144.8 0.7 4.8e-42 144.5 0.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF41702 - 4.7e-06 27.0 0.6 4.4e-05 23.8 0.1 2.5 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF41702 - 0.08 12.6 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Peptidase_S10 PF00450.22 ORF39532 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF39532 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family DUF1275 PF06912.11 ORF38270 - 4.3e-25 88.8 13.0 6.2e-25 88.2 13.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Pkinase PF00069.25 ORF37187 - 2.5e-65 220.5 0.0 3.3e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF37187 - 7.1e-31 107.4 0.0 9.6e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF37187 - 2.2e-05 23.9 0.0 3.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF37187 - 0.00044 19.7 0.0 0.0024 17.2 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Peptidase_S10 PF00450.22 ORF31138 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF31138 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family EF-hand_7 PF13499.6 ORF30742 - 0.03 14.8 1.0 0.15 12.5 0.1 2.7 3 0 0 3 3 3 0 EF-hand domain pair KN_motif PF12075.8 ORF30742 - 0.088 12.6 0.4 3 7.7 0.1 3.3 3 0 0 3 3 3 0 KN motif EF-hand_6 PF13405.6 ORF30742 - 0.096 12.7 0.1 0.36 10.9 0.1 2.0 1 0 0 1 1 1 0 EF-hand domain Peptidase_S10 PF00450.22 ORF2733 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF2733 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Asp PF00026.23 ORF2452 - 6.1e-41 140.9 1.5 7.5e-41 140.6 1.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF2452 - 5e-06 26.9 0.5 4.4e-05 23.8 0.1 2.4 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF2452 - 0.079 12.6 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal CENP-F_leu_zip PF10473.9 ORF21996 - 0.0053 16.8 2.1 0.0053 16.8 2.1 3.5 4 1 0 4 4 4 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Herpes_BLRF2 PF05812.12 ORF21996 - 0.034 14.3 5.2 1.2 9.3 1.4 3.1 2 1 0 2 2 2 0 Herpesvirus BLRF2 protein Shugoshin_N PF07558.11 ORF21996 - 0.039 13.8 2.3 0.33 10.9 0.2 3.1 2 1 1 3 3 3 0 Shugoshin N-terminal coiled-coil region bZIP_1 PF00170.21 ORF21996 - 0.041 14.0 0.7 0.041 14.0 0.7 2.7 2 0 0 2 2 2 0 bZIP transcription factor CCDC92 PF14916.6 ORF21996 - 0.16 11.7 2.8 3 7.7 0.5 3.1 2 1 0 2 2 2 0 Coiled-coil domain of unknown function Seryl_tRNA_N PF02403.22 ORF21996 - 0.8 10.0 0.1 0.8 10.0 0.1 4.4 4 1 0 4 4 4 0 Seryl-tRNA synthetase N-terminal domain Cep57_MT_bd PF06657.13 ORF21996 - 4.1 7.9 8.3 0.22 12.0 1.0 2.7 3 0 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF1843 PF08898.10 ORF21996 - 7.3 7.2 18.9 13 6.3 0.2 6.1 6 1 0 6 6 6 0 Domain of unknown function (DUF1843) YabA PF06156.13 ORF21996 - 8.7 7.0 12.0 1.5 9.5 0.2 4.1 2 1 0 3 3 3 0 Initiation control protein YabA Peptidase_S10 PF00450.22 ORF20440 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF20440 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family TIR_2 PF13676.6 ORF142568 - 0.0012 19.5 0.0 0.059 14.0 0.0 2.3 2 0 0 2 2 2 1 TIR domain TIR PF01582.20 ORF142568 - 0.0016 18.3 0.0 0.0025 17.6 0.0 1.2 1 0 0 1 1 1 1 TIR domain DUF4407 PF14362.6 ORF142568 - 0.41 9.9 0.9 1.2 8.4 0.9 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) Peptidase_S10 PF00450.22 ORF142166 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF142166 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family ERO1 PF04137.15 ORF136924 - 3.9e-72 243.4 6.3 5e-72 243.0 6.3 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) Ferritin PF00210.24 ORF136924 - 0.015 15.3 0.1 0.038 13.9 0.1 1.7 1 0 0 1 1 1 0 Ferritin-like domain DNMT1-RFD PF12047.8 ORF136924 - 0.016 15.2 3.0 0.12 12.4 0.9 2.5 2 0 0 2 2 2 0 Cytosine specific DNA methyltransferase replication foci domain zf-CCCH PF00642.24 ORF136924 - 0.17 11.8 1.5 0.33 10.9 1.5 1.5 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) SH3_3 PF08239.11 ORF133578 - 8.6e-07 29.1 0.0 0.072 13.4 0.0 3.4 3 0 0 3 3 3 3 Bacterial SH3 domain Peptidase_S10 PF00450.22 ORF131342 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF131342 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Peptidase_S10 PF00450.22 ORF130379 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF130379 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Asp PF00026.23 ORF130273 - 6.1e-41 140.9 1.5 7.5e-41 140.6 1.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF130273 - 5e-06 26.9 0.5 4.4e-05 23.8 0.1 2.4 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF130273 - 0.079 12.6 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Asp PF00026.23 ORF1302 - 3.8e-42 144.8 9.6 5.3e-42 144.3 9.6 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF1302 - 1.5e-05 25.3 9.9 0.011 15.9 5.9 3.2 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 ORF1302 - 0.0047 17.5 0.1 3.5 8.3 0.0 2.9 2 1 0 2 2 2 2 Aspartyl protease OppC_N PF12911.7 ORF1302 - 0.21 11.6 0.9 5.6 7.0 0.0 2.8 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C SKG6 PF08693.10 ORF1302 - 0.24 10.9 7.6 0.6 9.6 7.6 1.7 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Pkinase PF00069.25 ORF126419 - 2.5e-65 220.5 0.0 3.3e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF126419 - 7.1e-31 107.4 0.0 9.6e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF126419 - 2.2e-05 23.9 0.0 3.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF126419 - 0.00044 19.7 0.0 0.0024 17.2 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Peptidase_S10 PF00450.22 ORF124705 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF124705 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family MORN PF02493.20 ORF123017 - 2.5e-40 134.0 75.8 6.7e-07 28.8 0.4 13.6 13 0 0 13 13 13 13 MORN repeat PMR5N PF14416.6 ORF123017 - 2.9 8.3 6.5 2.4 8.6 0.6 3.5 1 1 2 3 3 3 0 PMR5 N terminal Domain Peptidase_S10 PF00450.22 ORF121288 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF121288 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Asp PF00026.23 ORF120147 - 2e-41 142.5 1.8 2.4e-41 142.2 1.8 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF120147 - 4.9e-06 26.9 0.5 4.4e-05 23.8 0.1 2.4 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF120147 - 0.078 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Asp PF00026.23 ORF119051 - 4.7e-41 141.2 0.3 5.8e-41 140.9 0.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF119051 - 5e-06 26.9 0.3 4.4e-05 23.8 0.1 2.4 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal LMWSLP_N PF12211.8 ORF119051 - 0.08 12.6 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Low molecular weight S layer protein N terminal Peptidase_S10 PF00450.22 ORF114891 - 6.6e-97 325.6 1.2 7.6e-97 325.4 1.2 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Peptidase_S9 PF00326.21 ORF114891 - 0.068 12.6 0.0 6.6 6.1 0.0 2.7 3 0 0 3 3 3 0 Prolyl oligopeptidase family Pkinase PF00069.25 ORF112296 - 2.5e-65 220.5 0.0 3.3e-65 220.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF112296 - 7.1e-31 107.4 0.0 9.6e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF112296 - 2.2e-05 23.9 0.0 3.3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF112296 - 0.00044 19.7 0.0 0.0024 17.2 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Asp PF00026.23 ORF110247 - 2.3e-41 142.3 1.9 2.9e-41 141.9 1.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF110247 - 0.00062 20.0 0.3 0.0039 17.4 0.1 2.1 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal DUF5461 PF17545.2 NODE_10297_length_1358_cov_102.036281_g7604_i0forward_frame_3 - 0.092 13.1 0.2 0.31 11.4 0.2 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5461) zf-C2HE PF16278.5 NODE_10297_length_1358_cov_102.036281_g7604_i0forward_frame_3 - 0.64 10.5 0.0 0.64 10.5 0.0 2.3 3 0 0 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger MFS_1 PF07690.16 ORF85851 - 6.8e-16 58.1 28.5 6.8e-16 58.1 28.5 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily PAP2 PF01569.21 ORF76154 - 6.8e-13 48.6 4.7 6.8e-13 48.6 4.7 2.8 3 0 0 3 3 3 1 PAP2 superfamily DUF2624 PF11116.8 ORF73121 - 0.14 13.1 3.9 0.17 12.8 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2624) Asp PF00026.23 ORF64340 - 3e-53 181.3 3.9 3.6e-53 181.0 3.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF64340 - 2.1e-06 28.1 1.7 3.9e-05 24.0 0.2 2.4 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal TipAS PF07739.13 ORF58189 - 0.66 10.5 17.0 1.8 9.1 0.1 4.2 4 1 0 4 4 4 0 TipAS antibiotic-recognition domain RhoGAP PF00620.27 ORF58189 - 3.1 7.6 5.6 2.7 7.8 0.9 2.8 3 0 0 3 3 3 0 RhoGAP domain ING PF12998.7 ORF58189 - 4.7 7.8 8.5 22 5.7 0.1 3.9 3 2 1 4 4 4 0 Inhibitor of growth proteins N-terminal histone-binding Ground-like PF04155.18 ORF56017 - 0.078 13.6 0.0 0.22 12.2 0.0 1.8 1 0 0 1 1 1 0 Ground-like domain Mur_ligase_M PF08245.12 ORF45915 - 2.7e-52 177.6 0.0 4.9e-52 176.7 0.0 1.4 1 0 0 1 1 1 1 Mur ligase middle domain Mur_ligase_C PF02875.21 ORF45915 - 3.8e-16 59.1 0.0 1.9e-15 56.9 0.0 2.2 1 1 0 1 1 1 1 Mur ligase family, glutamate ligase domain Mur_ligase PF01225.25 ORF45915 - 7.3e-10 39.0 0.0 3.3e-09 36.9 0.0 2.2 1 0 0 1 1 1 1 Mur ligase family, catalytic domain LpxD PF04613.14 ORF45915 - 0.0066 16.2 0.0 0.014 15.2 0.0 1.5 1 0 0 1 1 1 1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LRR_3 PF07725.12 ORF44528 - 0.7 9.8 2.3 6.3 6.8 0.1 2.4 2 0 0 2 2 2 0 Leucine Rich Repeat PAP_assoc PF03828.19 ORF43081 - 1.5e-12 47.5 1.5 3.4e-12 46.4 0.1 2.3 2 0 0 2 2 2 1 Cid1 family poly A polymerase RRM_1 PF00076.22 ORF43081 - 0.038 13.8 0.2 2.1 8.2 0.0 2.8 3 0 0 3 3 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WYL_2 PF10902.8 ORF43081 - 0.13 12.6 0.0 0.26 11.7 0.0 1.5 1 0 0 1 1 1 0 WYL_2, Sm-like SH3 beta-barrel fold PRIMA1 PF16101.5 ORF43081 - 7.3 6.7 15.7 1.5 8.9 5.2 2.7 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 BBS2_Mid PF14783.6 ORF42192 - 1.8e-06 27.9 0.1 0.00014 21.9 0.1 2.6 2 0 0 2 2 2 1 Ciliary BBSome complex subunit 2, middle region WD40 PF00400.32 ORF42192 - 2.7e-06 28.0 0.0 0.21 12.5 0.0 4.8 5 0 0 5 5 5 2 WD domain, G-beta repeat Nup160 PF11715.8 ORF42192 - 0.067 11.8 0.1 0.14 10.8 0.0 1.6 2 0 0 2 2 2 0 Nucleoporin Nup120/160 BBS2_Mid PF14783.6 ORF41494 - 1.8e-06 27.9 0.1 0.00014 21.9 0.1 2.6 2 0 0 2 2 2 1 Ciliary BBSome complex subunit 2, middle region WD40 PF00400.32 ORF41494 - 2.7e-06 28.0 0.0 0.21 12.5 0.0 4.8 5 0 0 5 5 5 2 WD domain, G-beta repeat Nup160 PF11715.8 ORF41494 - 0.067 11.8 0.1 0.14 10.8 0.0 1.6 2 0 0 2 2 2 0 Nucleoporin Nup120/160 Chloroa_b-bind PF00504.21 ORF38025 - 2.1e-33 116.1 0.0 3.6e-33 115.4 0.0 1.3 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Rieske PF00355.26 ORF38025 - 4.6e-12 45.7 0.0 1.2e-11 44.3 0.0 1.7 2 0 0 2 2 2 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF38025 - 1.2e-06 28.4 0.0 2.1e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain LRR_6 PF13516.6 ORF37947 - 0.0009 19.1 15.6 0.018 15.1 0.0 6.1 7 0 0 7 7 7 2 Leucine Rich repeat FNIP PF05725.12 ORF37947 - 0.045 13.9 0.2 2.2 8.5 0.0 3.1 3 0 0 3 3 3 0 FNIP Repeat DUF521 PF04412.13 ORF37947 - 0.18 10.5 0.0 0.27 9.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) DUF4423 PF14394.6 ORF34701 - 0.14 11.8 0.1 0.26 11.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) TipAS PF07739.13 ORF141368 - 0.66 10.5 17.0 1.8 9.1 0.1 4.2 4 1 0 4 4 4 0 TipAS antibiotic-recognition domain RhoGAP PF00620.27 ORF141368 - 3.1 7.6 5.6 2.7 7.8 0.9 2.8 3 0 0 3 3 3 0 RhoGAP domain ING PF12998.7 ORF141368 - 4.7 7.8 8.5 22 5.7 0.1 3.9 3 2 1 4 4 4 0 Inhibitor of growth proteins N-terminal histone-binding Bgal_small_N PF02929.17 ORF139323 - 1.4e-43 149.3 0.0 1.8e-43 148.9 0.0 1.1 1 0 0 1 1 1 1 Beta galactosidase small chain Chloroa_b-bind PF00504.21 ORF134553 - 2.1e-33 116.1 0.0 3.6e-33 115.4 0.0 1.3 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Rieske PF00355.26 ORF134553 - 4.6e-12 45.7 0.0 1.2e-11 44.3 0.0 1.7 2 0 0 2 2 2 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF134553 - 1.2e-06 28.4 0.0 2.1e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain PSII PF00421.19 ORF129952 - 9.8e-103 344.5 19.2 2.9e-101 339.6 19.2 2.6 1 1 0 1 1 1 1 Photosystem II protein Ion_trans PF00520.31 ORF124130 - 6.9e-15 55.0 9.9 1.2e-14 54.2 9.9 1.3 1 0 0 1 1 1 1 Ion transport protein DUF3143 PF11341.8 ORF124130 - 0.095 13.1 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3143) DUF3659 PF12396.8 ORF118498 - 0.098 12.6 1.2 0.44 10.5 1.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3659) DUF4806 PF16064.5 ORF118498 - 0.22 11.9 1.9 3.1 8.2 0.9 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4806) Myb_DNA-bind_3 PF12776.7 ORF118498 - 1.7 9.7 6.5 22 6.1 1.2 3.4 1 1 2 3 3 3 0 Myb/SANT-like DNA-binding domain BBS2_Mid PF14783.6 ORF110393 - 1.8e-06 27.9 0.1 0.00014 21.9 0.1 2.6 2 0 0 2 2 2 1 Ciliary BBSome complex subunit 2, middle region WD40 PF00400.32 ORF110393 - 2.7e-06 28.0 0.0 0.21 12.5 0.0 4.8 5 0 0 5 5 5 2 WD domain, G-beta repeat Nup160 PF11715.8 ORF110393 - 0.067 11.8 0.1 0.14 10.8 0.0 1.6 2 0 0 2 2 2 0 Nucleoporin Nup120/160 Ank_2 PF12796.7 ORF110037 - 1.4e-32 112.1 3.9 4.7e-13 49.5 0.1 4.3 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF110037 - 4.2e-30 103.7 4.1 6e-09 36.3 0.0 5.9 4 2 2 6 6 6 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF110037 - 9.4e-22 74.8 2.5 0.00052 20.3 0.0 8.0 8 0 0 8 8 8 4 Ankyrin repeat Ank PF00023.30 ORF110037 - 1.1e-19 69.8 11.0 0.00014 22.1 0.0 7.3 6 1 0 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 ORF110037 - 1.2e-14 54.1 6.5 0.00012 22.3 0.0 5.8 2 2 4 6 6 6 4 Ankyrin repeats (many copies) DUF1843 PF08898.10 ORF110037 - 0.075 13.6 1.7 9.4 6.8 0.0 4.0 4 0 0 4 4 4 0 Domain of unknown function (DUF1843) CENP-F_leu_zip PF10473.9 ORF105218 - 3.6 7.6 48.6 2.5 8.1 20.8 2.5 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IBR PF01485.21 ORF104750 - 6e-23 80.9 18.0 3.6e-13 49.5 2.1 3.3 3 0 0 3 3 3 3 IBR domain, a half RING-finger domain Pyr_redox_2 PF07992.14 ORF100746 - 1.4e-47 162.4 5.3 2.2e-47 161.7 5.3 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF100746 - 3.3e-32 111.0 0.5 1e-31 109.4 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF100746 - 1.8e-20 73.3 2.8 4.2e-20 72.1 2.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF100746 - 1.8e-06 27.5 0.3 2.7e-06 26.9 0.3 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF100746 - 1e-05 24.9 0.4 0.045 12.9 0.1 2.1 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_3 PF01494.19 ORF100746 - 0.016 14.5 3.6 0.42 9.8 0.1 2.2 2 0 0 2 2 2 0 FAD binding domain AlaDh_PNT_C PF01262.21 ORF100746 - 0.028 13.7 0.3 0.028 13.7 0.3 1.9 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_8 PF13450.6 ORF100746 - 0.055 13.7 0.1 0.13 12.5 0.1 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DAO PF01266.24 ORF100746 - 4.8 6.7 11.1 2.4 7.7 0.0 2.7 2 1 1 3 3 3 0 FAD dependent oxidoreductase Ion_trans_2 PF07885.16 ORF97319 - 4.9e-12 45.6 1.3 1.6e-11 44.0 1.3 1.9 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF97319 - 1.9e-05 24.1 16.2 3.9e-05 23.0 16.2 1.5 1 1 0 1 1 1 1 Ion transport protein PhaP_Bmeg PF09602.10 ORF82706 - 0.098 12.6 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) N36 PF11438.8 ORF7694 - 0.019 14.7 0.6 0.047 13.5 0.6 1.6 1 0 0 1 1 1 0 36-mer N-terminal peptide of the N protein (N36) Herpes_gE PF02480.16 ORF7694 - 0.16 10.7 0.0 0.26 10.0 0.0 1.2 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E ORC6 PF05460.13 ORF7694 - 3.1 7.0 6.3 0.63 9.3 0.7 2.1 2 0 0 2 2 2 0 Origin recognition complex subunit 6 (ORC6) PA PF02225.22 ORF68552 - 6.3e-08 32.5 0.0 2.1e-07 30.9 0.0 1.8 2 0 0 2 2 2 1 PA domain Thioredoxin_4 PF13462.6 ORF68552 - 0.082 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin LOR PF04525.12 ORF68467 - 9e-21 74.3 0.0 2.3e-09 37.1 0.0 2.2 2 0 0 2 2 2 2 LURP-one-related Scramblase PF03803.15 ORF68467 - 0.00024 20.5 0.0 0.63 9.3 0.0 2.6 2 0 0 2 2 2 2 Scramblase PA PF02225.22 ORF61036 - 6.3e-08 32.5 0.0 2.1e-07 30.9 0.0 1.8 2 0 0 2 2 2 1 PA domain Thioredoxin_4 PF13462.6 ORF61036 - 0.082 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin PA PF02225.22 ORF57338 - 6.2e-08 32.5 0.0 2.1e-07 30.9 0.0 1.8 2 0 0 2 2 2 1 PA domain Thioredoxin_4 PF13462.6 ORF57338 - 0.082 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin WES_acyltransf PF03007.16 ORF52163 - 4.4e-05 23.4 0.0 6.5e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF52163 - 0.00023 21.1 0.0 0.0006 19.8 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Peptidase_M20 PF01546.28 ORF51827 - 2.8e-43 148.0 0.1 3.5e-43 147.7 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 UPF0370 PF13980.6 ORF51827 - 9.7e-33 112.0 11.0 1.9e-32 111.1 11.0 1.5 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0370) M20_dimer PF07687.14 ORF51827 - 2.4e-25 88.6 0.0 5.5e-25 87.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 ORF51827 - 0.0078 15.9 0.0 0.05 13.3 0.0 2.0 2 0 0 2 2 2 1 Peptidase family M28 Peptidase_M18 PF02127.15 ORF51827 - 0.064 12.0 0.0 0.1 11.4 0.0 1.2 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) FliG_M PF14841.6 ORF42465 - 0.18 12.1 4.9 26 5.1 0.0 3.8 4 0 0 4 4 4 0 FliG middle domain DUF2795 PF11387.8 ORF42465 - 7.5 6.8 6.8 1.3 9.3 0.2 3.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2795) Biopterin_H PF00351.21 ORF34212 - 7.3e-112 373.7 0.4 9.9e-112 373.2 0.4 1.1 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase DUF840 PF05801.11 ORF33103 - 0.019 15.0 0.2 0.038 14.1 0.2 1.4 1 0 0 1 1 1 0 Lagovirus protein of unknown function (DUF840) PLDc_2 PF13091.6 ORF331 - 6.3e-32 110.3 0.0 2.6e-22 79.1 0.0 2.3 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 ORF331 - 1.8e-14 53.2 2.8 5.5e-08 32.7 0.2 2.4 2 0 0 2 2 2 2 Phospholipase D Active site motif MORN PF02493.20 ORF29125 - 1.4e-71 232.3 123.4 7.1e-09 35.1 2.0 15.4 16 0 0 16 16 16 13 MORN repeat DUF3490 PF11995.8 ORF24107 - 0.019 14.8 6.1 0.069 13.0 6.1 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3490) FlaC_arch PF05377.11 ORF24107 - 0.042 14.3 0.6 0.042 14.3 0.6 3.2 4 0 0 4 4 4 0 Flagella accessory protein C (FlaC) WES_acyltransf PF03007.16 ORF153009 - 4.4e-05 23.4 0.0 6.5e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF153009 - 0.00023 21.1 0.0 0.0006 19.8 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Asp PF00026.23 ORF150517 - 2.4e-42 145.5 3.7 3.1e-42 145.1 3.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF150517 - 1.5e-05 25.3 0.3 5.2e-05 23.5 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal Gemini_AL3 PF01407.17 ORF150517 - 0.072 12.9 0.1 0.81 9.5 0.0 2.5 3 0 0 3 3 3 0 Geminivirus AL3 protein MORN PF02493.20 ORF129311 - 1.8e-74 241.4 112.9 7.1e-09 35.1 2.0 15.6 16 0 0 16 16 16 13 MORN repeat SecA_PP_bind PF01043.20 ORF120868 - 0.00052 20.6 0.1 0.0012 19.5 0.1 1.7 1 0 0 1 1 1 1 SecA preprotein cross-linking domain Helicase_C PF00271.31 ORF120868 - 0.00078 19.8 3.3 0.0016 18.8 1.5 2.5 2 2 0 2 2 2 1 Helicase conserved C-terminal domain MFS_1 PF07690.16 ORF105007 - 2.4e-23 82.7 35.3 8.8e-14 51.2 14.5 2.3 1 1 0 2 2 2 2 Major Facilitator Superfamily # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks27.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks27.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks27.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks27.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- nsp8 PF08717.10 ORF114059 - 0.027 14.4 1.7 0.031 14.2 1.7 1.1 1 0 0 1 1 1 0 nsp8 replicase FadR_C PF07840.12 ORF114059 - 0.059 13.3 1.0 0.14 12.1 1.0 1.7 1 1 0 1 1 1 0 FadR C-terminal domain EF-hand_1 PF00036.32 ORF113303 - 1.3e-05 24.4 2.6 0.00046 19.5 0.4 2.4 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF113303 - 0.00018 20.9 0.1 0.0004 19.8 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF113303 - 0.00022 20.9 0.5 0.0013 18.5 0.2 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF113303 - 0.0011 19.4 0.9 0.0018 18.7 0.9 1.5 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF113303 - 0.041 13.7 0.2 0.19 11.6 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain pair DUF1356 PF07092.12 ORF113012 - 0.0066 15.8 1.1 0.0088 15.3 1.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1356) DUF4609 PF15382.6 ORF111940 - 2 8.4 5.7 1.3 9.0 0.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4609) GCM PF03615.15 ORF111908 - 0.12 12.3 0.4 0.14 12.1 0.4 1.1 1 0 0 1 1 1 0 GCM motif protein Polysacc_deac_1 PF01522.21 ORF108983 - 0.035 14.0 0.3 0.046 13.6 0.3 1.2 1 0 0 1 1 1 0 Polysaccharide deacetylase DUF1664 PF07889.12 ORF108983 - 0.18 11.9 4.5 0.16 12.0 2.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 ORF108983 - 0.31 11.6 6.1 0.43 11.1 6.1 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region Med9 PF07544.13 ORF108983 - 0.33 11.1 6.2 3 8.0 0.4 2.1 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Exonuc_X-T_C PF08411.10 ORF108788 - 9.7e-26 90.5 2.0 1.1e-25 90.3 2.0 1.0 1 0 0 1 1 1 1 Exonuclease C-terminal PCI PF01399.27 ORF106520 - 1.2 9.7 4.1 36 4.9 4.1 2.0 1 1 0 1 1 1 0 PCI domain SNARE PF05739.19 ORF106132 - 0.84 9.7 5.6 1.5 8.8 5.6 1.4 1 0 0 1 1 1 0 SNARE domain DUF1540 PF07561.11 ORF105838 - 0.078 13.3 1.5 0.19 12.1 1.5 1.7 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1540) BLI1 PF17324.2 ORF105126 - 0.013 16.2 1.9 0.029 15.0 1.9 1.6 1 1 0 1 1 1 0 BLOC-1 interactor 1 NCD3G PF07562.14 ORF102571 - 0.033 14.2 2.4 0.065 13.2 2.4 1.4 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR Ribosomal_L35Ae PF01247.18 ORF102000 - 0.037 14.2 0.1 0.047 13.9 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L35Ae DUF5048 PF16467.5 ORF101646 - 0.22 11.8 0.0 0.3 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5048) SMP_2 PF10144.9 ORF101620 - 0.09 12.4 0.5 0.13 11.9 0.5 1.2 1 0 0 1 1 1 0 Bacterial virulence factor haemolysin RNR_N PF08343.10 ORF101245 - 0.016 15.3 1.1 0.017 15.1 0.5 1.4 2 0 0 2 2 2 0 Ribonucleotide reductase N-terminal SAS4 PF15460.6 ORF101245 - 0.043 13.9 1.9 0.23 11.6 0.6 2.0 1 1 1 2 2 2 0 Something about silencing, SAS, complex subunit 4 Ldl_recept_a PF00057.18 ORF100835 - 2 8.7 8.3 0.37 11.1 0.6 2.4 2 1 0 2 2 2 0 Low-density lipoprotein receptor domain class A PAC4 PF16093.5 ORF100193 - 5.3e-07 29.7 0.0 6.6e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Proteasome assembly chaperone 4 Glycolipid_bind PF06475.11 NODE_58992_length_283_cov_0.967742_g51053_i0reverse_frame_1 - 0.086 12.3 0.0 0.096 12.2 0.0 1.2 1 0 0 1 1 1 0 Putative glycolipid-binding Longin PF13774.6 NODE_58991_length_283_cov_1.028226_g51052_i0reverse_frame_1 - 0.03 14.3 0.8 0.039 14.0 0.8 1.2 1 0 0 1 1 1 0 Regulated-SNARE-like domain SecM PF06558.12 NODE_58990_length_283_cov_1.044355_g51051_i0reverse_frame_1 - 0.14 12.3 0.4 0.15 12.1 0.4 1.2 1 0 0 1 1 1 0 Secretion monitor precursor protein (SecM) CMV_US PF08001.11 NODE_58987_length_283_cov_1.245968_g51048_i0reverse_frame_1 - 0.16 11.2 5.5 0.2 10.9 5.5 1.1 1 0 0 1 1 1 0 CMV US Dict-STAT-coil PF09267.10 NODE_58979_length_283_cov_1.391129_g51040_i0forward_frame_1 - 0.051 13.9 1.9 0.079 13.3 1.9 1.4 1 1 0 1 1 1 0 Dictyostelium STAT, coiled coil DUF809 PF05663.11 NODE_58976_length_283_cov_1.427419_g51037_i0forward_frame_1 - 0.88 9.7 2.9 1 9.5 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Voltage_CLC PF00654.20 NODE_58974_length_283_cov_1.491935_g51035_i0forward_frame_1 - 2.2e-25 89.7 2.4 2.3e-25 89.6 2.4 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel Rab3-GTPase_cat PF13890.6 NODE_58965_length_283_cov_1.612903_g51026_i0forward_frame_1 - 0.0082 15.8 0.0 0.0088 15.7 0.0 1.1 1 0 0 1 1 1 1 Rab3 GTPase-activating protein catalytic subunit DUF5540 PF17694.1 NODE_58962_length_283_cov_1.758065_g51023_i0reverse_frame_1 - 0.0058 17.1 2.4 0.0072 16.8 2.4 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5540) Toxin_10 PF05431.11 NODE_58955_length_283_cov_1.854839_g51016_i0forward_frame_1 - 0.1 12.1 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Insecticidal Crystal Toxin, P42 DUF4943 PF16301.5 NODE_58936_length_283_cov_2.274194_g50997_i0forward_frame_1 - 0.078 13.0 0.0 0.097 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4943) Exo84_C PF16528.5 NODE_58934_length_283_cov_2.330645_g50995_i0forward_frame_1 - 0.21 11.4 1.4 0.23 11.2 1.4 1.0 1 0 0 1 1 1 0 Exocyst component 84 C-terminal Selenoprotein_S PF06936.11 NODE_58930_length_283_cov_2.491935_g50991_i0forward_frame_1 - 0.28 11.0 0.4 0.35 10.7 0.4 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) Flavin_Reduct PF01613.18 NODE_58929_length_283_cov_2.516129_g50990_i0reverse_frame_1 - 0.0039 17.3 0.0 0.0078 16.3 0.0 1.5 2 0 0 2 2 2 1 Flavin reductase like domain LRR_4 PF12799.7 NODE_58923_length_283_cov_2.717742_g50984_i0reverse_frame_1 - 0.074 13.5 1.5 0.13 12.8 1.0 1.7 1 1 1 2 2 2 0 Leucine Rich repeats (2 copies) Viral_Beta_CD PF04530.12 NODE_58922_length_283_cov_2.758065_g50983_i0reverse_frame_1 - 0.12 12.7 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Viral Beta C/D like family GrpE PF01025.19 NODE_58918_length_283_cov_2.979839_g50979_i0reverse_frame_1 - 3.2e-26 92.0 0.3 3.4e-26 91.9 0.3 1.0 1 0 0 1 1 1 1 GrpE Usher PF00577.20 NODE_58917_length_283_cov_2.979839_g50978_i0forward_frame_1 - 2.9e-26 92.4 3.5 3.2e-26 92.3 3.5 1.0 1 0 0 1 1 1 1 Outer membrane usher protein vMSA PF00695.19 NODE_58912_length_283_cov_3.330645_g50973_i0reverse_frame_1 - 0.18 10.9 8.7 0.21 10.6 8.7 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF3810 PF12725.7 NODE_58912_length_283_cov_3.330645_g50973_i0reverse_frame_1 - 1.6 8.0 5.7 1.6 8.0 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Bunya_NS-S PF01104.17 NODE_58909_length_283_cov_3.572581_g50970_i0reverse_frame_1 - 0.046 13.5 0.3 0.073 12.9 0.3 1.3 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-s Pkinase PF00069.25 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 1.9e-27 96.3 0.0 2.1e-27 96.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 5e-14 52.2 0.0 5.2e-14 52.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Seadorna_VP7 PF07387.11 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.0017 17.4 0.0 0.002 17.3 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pkinase_fungal PF17667.1 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.002 17.0 0.0 0.0021 16.9 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.0038 16.6 0.0 0.0046 16.3 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.0088 15.0 0.0 0.0097 14.9 0.0 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Pox_ser-thr_kin PF05445.11 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.051 12.6 0.0 0.056 12.4 0.0 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase DUF5449 PF17528.2 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.058 13.2 0.0 0.058 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5449) APH PF01636.23 NODE_58905_length_283_cov_4.241935_g50966_i0reverse_frame_1 - 0.074 13.0 0.1 0.089 12.7 0.1 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4783 PF16022.5 NODE_58901_length_283_cov_5.955645_g50962_i0forward_frame_1 - 0.01 16.0 2.9 0.012 15.7 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4783) Ribosomal_L18_c PF14204.6 NODE_58901_length_283_cov_5.955645_g50962_i0forward_frame_1 - 0.015 16.3 6.6 0.021 15.7 6.6 1.1 1 0 0 1 1 1 0 Ribosomal L18 C-terminal region DUF1666 PF07891.12 NODE_58901_length_283_cov_5.955645_g50962_i0forward_frame_1 - 0.022 14.4 1.0 0.024 14.3 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1666) Protocadherin PF08374.11 NODE_58901_length_283_cov_5.955645_g50962_i0forward_frame_1 - 0.081 12.9 1.4 0.081 12.9 1.4 1.1 1 0 0 1 1 1 0 Protocadherin DUF2990 PF11693.8 NODE_58893_length_283_cov_43.879032_g50954_i0reverse_frame_1 - 0.2 11.8 0.1 0.35 11.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) zf-CCCH_7 PF18586.1 NODE_58890_length_283_cov_51.891129_g50951_i0reverse_frame_1 - 0.023 15.0 0.8 0.04 14.2 0.8 1.4 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 NapE PF06796.11 NODE_58885_length_283_cov_56.939516_g50946_i0forward_frame_1 - 1.7 8.2 4.1 3.1 7.4 0.0 2.6 3 0 0 3 3 3 0 Periplasmic nitrate reductase protein NapE DUF2285 PF10074.9 NODE_58881_length_283_cov_62.403226_g50942_i0reverse_frame_1 - 0.041 14.5 0.4 0.049 14.3 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) DotU PF09850.9 NODE_58881_length_283_cov_62.403226_g50942_i0reverse_frame_1 - 0.044 13.5 0.2 0.053 13.2 0.2 1.1 1 0 0 1 1 1 0 Type VI secretion system protein DotU UPF0242 PF06785.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.00032 20.9 16.7 0.00035 20.8 16.7 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus SlyX PF04102.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.00061 20.4 10.6 0.00083 19.9 10.6 1.3 1 0 0 1 1 1 1 SlyX OmpH PF03938.14 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.00074 19.9 20.8 0.00099 19.5 20.8 1.1 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) DUF1664 PF07889.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.00085 19.4 5.6 0.001 19.1 5.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0017 18.4 17.6 0.0025 17.9 17.6 1.3 1 0 0 1 1 1 1 Centrosome localisation domain of PPC89 CENP-F_leu_zip PF10473.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0018 18.3 20.1 0.0019 18.2 20.1 1.0 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HMMR_N PF15905.5 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0025 17.3 16.5 0.003 17.1 16.5 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal APG6_N PF17675.1 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0028 18.2 21.9 0.0042 17.6 21.9 1.3 1 0 0 1 1 1 1 Apg6 coiled-coil region Atg14 PF10186.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0036 16.4 16.6 0.004 16.3 16.6 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0045 15.9 17.7 0.0051 15.7 17.7 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein ATG16 PF08614.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.0046 17.2 20.8 0.0058 16.9 20.4 1.4 1 1 0 1 1 1 1 Autophagy protein 16 (ATG16) FlaC_arch PF05377.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.011 16.1 10.2 0.05 14.0 6.4 2.2 1 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Rootletin PF15035.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.013 15.5 14.1 0.016 15.3 14.1 1.0 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion TolA_bind_tri PF16331.5 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.022 14.8 10.9 0.16 12.1 10.9 2.0 1 1 0 1 1 1 0 TolA binding protein trimerisation DUF4140 PF13600.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.025 15.0 6.5 0.025 15.0 6.5 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) CENP-Q PF13094.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.025 14.8 19.4 0.032 14.4 19.4 1.1 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Golgin_A5 PF09787.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.027 14.0 11.2 0.035 13.6 11.2 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF3450 PF11932.8 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.031 13.6 15.4 0.037 13.3 15.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) YabA PF06156.13 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.044 14.4 10.7 0.058 14.0 10.7 1.3 1 0 0 1 1 1 0 Initiation control protein YabA Macoilin PF09726.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.059 11.9 14.6 0.07 11.7 14.6 1.0 1 0 0 1 1 1 0 Macoilin family ZapB PF06005.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.084 13.3 25.2 0.15 12.5 24.8 1.7 1 1 0 1 1 1 0 Cell division protein ZapB DUF724 PF05266.14 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.1 12.4 14.2 0.14 12.0 14.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) HemX PF04375.14 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.12 11.6 13.5 0.14 11.4 13.5 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Ran-binding PF05508.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.2 10.6 6.6 0.21 10.5 6.6 1.0 1 0 0 1 1 1 0 RanGTP-binding protein Prefoldin_2 PF01920.20 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.21 11.5 21.7 0.083 12.8 14.4 2.2 1 1 1 2 2 2 0 Prefoldin subunit DUF2344 PF10105.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.24 11.2 5.4 0.28 11.0 5.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) COG6 PF06419.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.25 9.5 8.2 0.3 9.2 8.2 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 DUF1690 PF07956.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.31 11.5 16.7 0.37 11.2 16.7 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) HAUS6_N PF14661.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.35 10.4 11.3 0.41 10.2 11.3 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Fib_alpha PF08702.10 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.42 10.8 8.1 0.97 9.6 8.1 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family FUSC PF04632.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.46 9.0 5.5 0.52 8.8 5.5 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Mto2_bdg PF12808.7 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.49 10.7 17.5 0.49 10.7 15.5 2.0 1 1 1 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region Phage_GPO PF05929.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.64 9.6 14.2 1.1 8.8 14.2 1.4 1 1 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase NPV_P10 PF05531.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.64 10.5 4.7 1.7 9.1 3.8 1.9 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein ADIP PF11559.8 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.67 10.0 18.4 0.84 9.7 18.4 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding FliD_N PF02465.18 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.68 10.7 9.1 2.9 8.7 9.1 2.0 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus Nup88 PF10168.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.68 7.7 10.4 0.71 7.6 10.4 1.0 1 0 0 1 1 1 0 Nuclear pore component AAA_13 PF13166.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.68 8.5 14.4 0.76 8.3 14.4 1.1 1 0 0 1 1 1 0 AAA domain DUF812 PF05667.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.69 8.7 17.7 0.76 8.6 17.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) HrpB7 PF09486.10 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.81 10.1 20.5 2.4 8.5 6.9 2.0 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) Fmp27_WPPW PF10359.9 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.83 8.4 12.0 0.89 8.3 12.0 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Prefoldin PF02996.17 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 0.94 9.4 14.3 0.92 9.4 3.1 2.1 1 1 1 2 2 2 0 Prefoldin subunit FapA PF03961.13 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.3 7.6 12.2 1.6 7.3 12.2 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Exonuc_VII_L PF02601.15 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.3 8.5 9.0 1.7 8.2 9.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit V_ATPase_I PF01496.19 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.3 6.9 10.5 1.3 6.8 10.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cep57_MT_bd PF06657.13 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.3 9.5 16.3 5.3 7.6 16.3 2.0 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 Seryl_tRNA_N PF02403.22 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.8 8.8 20.8 2.3 8.5 20.8 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Csm1_N PF18504.1 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 1.9 8.9 21.9 4.8 7.6 19.2 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain DivIC PF04977.15 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.2 8.1 20.6 0.17 11.7 12.5 2.4 1 1 1 2 2 2 0 Septum formation initiator Prominin PF05478.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.4 6.0 5.7 2.5 5.9 5.7 1.0 1 0 0 1 1 1 0 Prominin VPS38 PF17649.1 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.6 6.9 10.4 3.1 6.6 10.4 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting 38 MT PF12777.7 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.9 6.8 11.4 1.4 7.8 6.9 1.7 1 1 1 2 2 2 0 Microtubule-binding stalk of dynein motor DUF16 PF01519.16 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 2.9 8.4 14.0 0.71 10.4 10.3 1.8 1 1 1 2 2 2 0 Protein of unknown function DUF16 TMPIT PF07851.13 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 3.3 6.9 12.1 4 6.6 12.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein Spc24 PF08286.11 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 3.6 7.9 18.3 9.3 6.5 12.0 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF4407 PF14362.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 4.4 6.6 15.1 3.8 6.8 13.9 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4446 PF14584.6 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 5.1 7.1 10.8 16 5.5 9.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Sas6_CC PF18594.1 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 5.3 6.9 19.4 0.22 11.4 1.0 3.3 3 0 0 3 3 3 0 Sas6/XLF/XRCC4 coiled-coil domain BST2 PF16716.5 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 5.5 7.7 19.4 7.1 7.3 8.8 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 HSP70 PF00012.20 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 6.1 4.9 13.4 6.8 4.7 13.4 1.0 1 0 0 1 1 1 0 Hsp70 protein FemAB PF02388.16 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 8 5.2 12.9 9.4 5.0 12.9 1.1 1 0 0 1 1 1 0 FemAB family DUF641 PF04859.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 8.6 6.7 16.1 32 4.9 16.1 1.8 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) EMP24_GP25L PF01105.24 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 8.8 6.2 7.4 4.4 7.2 5.5 1.5 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD CENP-H PF05837.12 NODE_58880_length_283_cov_67.584677_g50941_i0forward_frame_1 - 9.6 6.7 20.1 28 5.2 16.8 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) PDU_like PF15953.5 NODE_58879_length_283_cov_71.592742_g50940_i0forward_frame_1 - 0.093 12.8 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative propanediol utilisation DUF3087 PF11286.8 NODE_58864_length_283_cov_122.818548_g50925_i0reverse_frame_1 - 0.088 12.3 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) GBP PF02263.19 NODE_58863_length_283_cov_125.951613_g50924_i0reverse_frame_1 - 0.0082 15.4 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain Vps4_C PF09336.10 NODE_58855_length_283_cov_341.713710_g50916_i0reverse_frame_1 - 0.058 13.4 0.0 0.085 12.9 0.0 1.2 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain FUSC PF04632.12 NODE_58853_length_284_cov_0.831325_g50914_i0reverse_frame_1 - 0.69 8.4 4.7 0.78 8.2 4.7 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family betaPIX_CC PF16523.5 NODE_58853_length_284_cov_0.831325_g50914_i0reverse_frame_1 - 2.1 8.2 7.5 8.4 6.3 1.1 2.6 1 1 2 3 3 3 0 betaPIX coiled coil Phage_CRI PF05144.14 NODE_58845_length_284_cov_1.313253_g50906_i0forward_frame_1 - 0.091 12.1 0.0 0.095 12.0 0.0 1.1 1 0 0 1 1 1 0 Phage replication protein CRI DUF3339 PF11820.8 NODE_58844_length_284_cov_1.329317_g50905_i0forward_frame_1 - 0.16 12.2 5.1 0.27 11.5 5.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3339) FtsH_ext PF06480.15 NODE_58844_length_284_cov_1.329317_g50905_i0forward_frame_1 - 1.3 9.4 5.8 0.46 10.9 3.2 1.4 2 0 0 2 2 2 0 FtsH Extracellular TFIIA_gamma_N PF02268.16 NODE_58843_length_284_cov_1.373494_g50904_i0reverse_frame_1 - 1.6e-05 24.8 0.1 2.1e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit, helical domain YebG PF07130.12 NODE_58829_length_284_cov_1.562249_g50890_i0reverse_frame_1 - 5.8e-34 115.8 1.6 6.6e-34 115.6 1.6 1.0 1 0 0 1 1 1 1 YebG protein TDH PF03347.13 NODE_58827_length_284_cov_1.606426_g50888_i0forward_frame_1 - 0.025 14.1 0.2 0.031 13.9 0.2 1.1 1 0 0 1 1 1 0 Vibrio thermostable direct hemolysin Enoyl_reductase PF12241.8 NODE_58823_length_284_cov_1.670683_g50884_i0forward_frame_1 - 0.088 12.1 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Trans-2-enoyl-CoA reductase catalytic region zf-C3H2C3 PF17122.5 NODE_58823_length_284_cov_1.670683_g50884_i0forward_frame_1 - 0.17 12.0 0.5 0.36 10.9 0.1 1.7 2 0 0 2 2 2 0 Zinc-finger DUF3454 PF11936.8 NODE_58819_length_284_cov_1.706827_g50880_i0forward_frame_1 - 0.033 14.6 6.2 0.044 14.2 6.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3454) MarC PF01914.17 NODE_58805_length_284_cov_2.240964_g50866_i0reverse_frame_1 - 3.2e-11 43.0 0.2 3.9e-11 42.7 0.2 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein SAM_Exu PF18609.1 NODE_58805_length_284_cov_2.240964_g50866_i0reverse_frame_1 - 0.1 12.7 0.2 0.15 12.2 0.2 1.3 1 0 0 1 1 1 0 Exuperantia SAM-like domain 7TM_GPCR_Srbc PF10316.9 NODE_58802_length_284_cov_2.321285_g50863_i0reverse_frame_1 - 0.011 15.3 2.3 0.011 15.3 2.3 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srbc Jun PF03957.13 NODE_58797_length_284_cov_2.457831_g50858_i0reverse_frame_1 - 0.54 10.1 3.4 0.33 10.8 1.8 1.4 1 1 0 1 1 1 0 Jun-like transcription factor pKID PF02173.17 NODE_58793_length_284_cov_2.554217_g50854_i0forward_frame_1 - 0.12 11.9 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 pKID domain OTU PF02338.19 NODE_58782_length_284_cov_2.935743_g50843_i0forward_frame_1 - 1.7e-07 31.8 0.0 1.9e-07 31.7 0.0 1.0 1 0 0 1 1 1 1 OTU-like cysteine protease TnsE_C PF18623.1 NODE_58768_length_284_cov_39.192771_g50829_i0reverse_frame_1 - 0.029 14.3 0.9 0.036 14.0 0.9 1.1 1 0 0 1 1 1 0 TnsE C-terminal domain TTL PF03133.15 NODE_58768_length_284_cov_39.192771_g50829_i0forward_frame_1 - 0.086 12.0 0.4 0.12 11.5 0.4 1.1 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family Peptidase_S29 PF02907.15 NODE_58767_length_284_cov_39.570281_g50828_i0forward_frame_1 - 0.18 11.6 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease KAR9 PF08580.10 NODE_58764_length_284_cov_45.285141_g50825_i0forward_frame_1 - 0.86 8.1 2.9 0.84 8.1 2.9 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 HAUS4 PF14735.6 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 0.019 14.7 1.9 0.023 14.4 1.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 4 Fmp27_WPPW PF10359.9 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 0.056 12.3 1.7 0.065 12.1 1.7 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain PRKG1_interact PF15898.5 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 0.082 13.8 3.0 0.11 13.4 3.0 1.2 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain CR6_interact PF10147.9 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 0.23 11.1 4.7 0.43 10.3 4.7 1.5 1 1 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 HalX PF08663.10 NODE_58756_length_284_cov_70.257028_g50817_i0reverse_frame_1 - 4.6 7.6 7.6 2.9 8.3 0.9 2.5 1 1 0 2 2 2 0 HalX domain Orbi_NS3 PF01616.16 NODE_58754_length_284_cov_75.281124_g50815_i0forward_frame_1 - 0.023 14.4 0.1 0.027 14.2 0.1 1.1 1 0 0 1 1 1 0 Orbivirus NS3 DSL PF01414.19 NODE_58752_length_284_cov_79.405622_g50813_i0reverse_frame_1 - 0.1 12.9 0.3 0.1 12.9 0.3 1.8 2 0 0 2 2 2 0 Delta serrate ligand Caveolin PF01146.17 NODE_58750_length_284_cov_80.445783_g50811_i0reverse_frame_1 - 0.3 11.1 3.6 0.37 10.8 3.6 1.1 1 0 0 1 1 1 0 Caveolin DUF3997 PF13162.6 NODE_58747_length_284_cov_93.751004_g50808_i0forward_frame_1 - 0.14 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3997) DUF5590 PF17881.1 NODE_58742_length_284_cov_122.562249_g50803_i0reverse_frame_1 - 0.098 12.8 0.1 0.73 10.0 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5590) DUF2043 PF09740.9 NODE_58739_length_284_cov_172.168675_g50800_i0forward_frame_1 - 0.044 14.5 2.4 0.075 13.7 2.4 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2043) Corona_NS2 PF04753.12 NODE_58739_length_284_cov_172.168675_g50800_i0forward_frame_1 - 0.11 13.1 0.1 0.16 12.5 0.1 1.3 1 1 0 1 1 1 0 Coronavirus non-structural protein NS2 DUF5579 PF17742.1 NODE_58733_length_284_cov_237.887550_g50794_i0forward_frame_1 - 1.7 8.1 9.7 0.67 9.5 3.8 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5579) GCS2 PF04107.13 NODE_58732_length_284_cov_300.425703_g50793_i0reverse_frame_1 - 0.034 13.5 0.3 0.038 13.3 0.3 1.0 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) CA_like PF10563.9 NODE_58730_length_284_cov_12723.112450_g50791_i0forward_frame_1 - 0.057 13.3 0.0 0.058 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative carbonic anhydrase LCCL PF03815.19 NODE_58699_length_285_cov_1.800000_g50760_i0reverse_frame_1 - 0.1 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 LCCL domain PfaD_N PF18328.1 NODE_58698_length_285_cov_1.856000_g50759_i0forward_frame_1 - 0.12 12.4 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Fatty acid synthase subunit PfaD N-terminal domain Osmo_CC PF08946.10 NODE_58678_length_285_cov_2.112000_g50739_i0reverse_frame_1 - 0.57 10.5 3.8 15 5.9 0.1 3.0 3 0 0 3 3 3 0 Osmosensory transporter coiled coil LPD23 PF18838.1 NODE_58678_length_285_cov_2.112000_g50739_i0reverse_frame_1 - 0.9 9.4 2.9 14 5.6 0.2 2.1 1 1 1 2 2 2 0 Large polyvalent protein associated domain 23 VSP PF03302.13 NODE_58677_length_285_cov_2.116000_g50738_i0forward_frame_1 - 0.0013 17.7 2.6 0.0014 17.6 2.6 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein DUF1177 PF06675.11 NODE_58669_length_285_cov_2.356000_g50730_i0forward_frame_1 - 0.16 10.8 0.0 0.18 10.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1177) Strep_his_triad PF04270.13 NODE_58665_length_285_cov_2.484000_g50726_i0reverse_frame_1 - 0.02 14.9 0.3 0.037 14.0 0.3 1.4 1 0 0 1 1 1 0 Streptococcal histidine triad protein Phe_tRNA-synt_N PF02912.18 NODE_58663_length_285_cov_2.572000_g50724_i0reverse_frame_1 - 0.00047 20.0 0.1 0.0013 18.6 0.0 1.8 2 0 0 2 2 2 1 Aminoacyl tRNA synthetase class II, N-terminal domain DUF4712 PF15830.5 NODE_58662_length_285_cov_2.580000_g50723_i0reverse_frame_1 - 0.054 13.2 0.3 0.061 13.0 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4712) DUF952 PF06108.12 NODE_58660_length_285_cov_2.660000_g50721_i0reverse_frame_1 - 0.14 12.1 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF952) Rot1 PF10681.9 NODE_58657_length_285_cov_2.796000_g50718_i0forward_frame_1 - 0.11 12.0 0.6 0.13 11.8 0.6 1.1 1 0 0 1 1 1 0 Chaperone for protein-folding within the ER, fungal DUF4375 PF14300.6 NODE_58657_length_285_cov_2.796000_g50718_i0forward_frame_1 - 0.14 12.4 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4375) Co_AT_N PF12557.8 NODE_58656_length_285_cov_2.820000_g50717_i0reverse_frame_1 - 4.1 7.4 9.7 0.44 10.5 4.6 2.1 2 0 0 2 2 2 0 Cob(I)alamin adenosyltransferase N terminal SLAC1 PF03595.17 NODE_58656_length_285_cov_2.820000_g50717_i0forward_frame_1 - 2.2e-06 27.2 8.0 2.2e-06 27.1 8.0 1.0 1 0 0 1 1 1 1 Voltage-dependent anion channel DUF4408 PF14364.6 NODE_58656_length_285_cov_2.820000_g50717_i0forward_frame_1 - 0.18 11.6 2.5 0.5 10.2 2.5 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4408) Pkinase PF00069.25 NODE_58655_length_285_cov_2.880000_g50716_i0forward_frame_1 - 2.1e-19 69.9 0.6 2.6e-19 69.6 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58655_length_285_cov_2.880000_g50716_i0forward_frame_1 - 8.1e-16 58.1 0.3 9.7e-16 57.8 0.3 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Inos-1-P_synth PF01658.17 NODE_58655_length_285_cov_2.880000_g50716_i0forward_frame_1 - 0.053 13.8 1.0 0.065 13.5 1.0 1.1 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase CBM_14 PF01607.24 NODE_58654_length_285_cov_2.900000_g50715_i0forward_frame_1 - 0.013 15.6 0.7 0.02 15.1 0.7 1.2 1 0 0 1 1 1 0 Chitin binding Peritrophin-A domain 2-oxoacid_dh PF00198.23 NODE_58648_length_285_cov_3.024000_g50709_i0reverse_frame_1 - 0.26 10.7 0.0 0.32 10.4 0.0 1.1 1 0 0 1 1 1 0 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HopA1 PF17914.1 NODE_58644_length_285_cov_3.124000_g50705_i0reverse_frame_1 - 0.024 14.4 0.0 0.028 14.2 0.0 1.0 1 0 0 1 1 1 0 HopA1 effector protein family COX6B PF02297.17 NODE_58641_length_285_cov_3.912000_g50702_i0forward_frame_1 - 0.0058 16.8 0.9 0.0058 16.8 0.9 2.1 2 0 0 2 2 2 1 Cytochrome oxidase c subunit VIb TMEM72 PF16054.5 NODE_58639_length_285_cov_5.316000_g50700_i0forward_frame_1 - 0.11 12.2 1.4 0.11 12.1 1.4 1.1 1 0 0 1 1 1 0 Transmembrane protein family 72 HEPN_RnaseLS PF18869.1 NODE_58637_length_285_cov_12.992000_g50698_i0reverse_frame_1 - 0.088 12.9 0.2 0.098 12.8 0.2 1.1 1 0 0 1 1 1 0 RnaseLS-like HEPN DUF1189 PF06691.11 NODE_58636_length_285_cov_28.704000_g50697_i0forward_frame_1 - 1.8 8.1 14.7 2 7.9 14.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) ABC_membrane PF00664.23 NODE_58633_length_285_cov_40.404000_g50694_i0forward_frame_1 - 0.00052 19.8 0.1 0.00052 19.8 0.1 1.4 2 0 0 2 2 2 1 ABC transporter transmembrane region Transp_Tc5_C PF04236.15 NODE_58628_length_285_cov_49.020000_g50689_i0forward_frame_1 - 0.028 14.8 1.3 0.04 14.3 1.3 1.3 1 0 0 1 1 1 0 Tc5 transposase C-terminal domain Histone_H2A_C PF16211.5 NODE_58618_length_285_cov_73.948000_g50679_i0reverse_frame_1 - 0.64 9.8 5.2 1.2 9.0 5.2 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A DUF5434 PF17502.2 NODE_58606_length_285_cov_121.996000_g50667_i0reverse_frame_1 - 0.087 12.8 1.0 0.11 12.5 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5434) WWE PF02825.20 NODE_58605_length_285_cov_132.148000_g50666_i0reverse_frame_1 - 2.5e-09 37.6 1.1 3.3e-09 37.2 1.1 1.1 1 0 0 1 1 1 1 WWE domain Ribosomal_L24e PF01246.20 NODE_58605_length_285_cov_132.148000_g50666_i0reverse_frame_1 - 0.048 13.9 0.0 0.21 11.9 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L24e PHD_3 PF13922.6 NODE_58597_length_285_cov_265.204000_g50658_i0forward_frame_1 - 0.043 14.2 4.7 0.07 13.5 4.7 1.4 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx DUF5318 PF17249.2 NODE_58596_length_285_cov_294.140000_g50657_i0reverse_frame_1 - 0.03 14.1 0.0 0.042 13.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5318) Herpes_BLLF1 PF05109.13 NODE_58594_length_285_cov_328.332000_g50655_i0reverse_frame_1 - 5e-06 24.8 40.3 5.4e-06 24.7 40.3 1.0 1 0 0 1 1 1 1 Herpes virus major outer envelope glycoprotein (BLLF1) Asp-B-Hydro_N PF05279.11 NODE_58594_length_285_cov_328.332000_g50655_i0reverse_frame_1 - 2.1 8.3 4.3 2.3 8.2 4.3 1.0 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DUF779 PF05610.11 NODE_58587_length_286_cov_1.123506_g50648_i0reverse_frame_3 - 0.051 13.8 0.0 0.065 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF779) ICEA PF05315.11 NODE_58587_length_286_cov_1.123506_g50648_i0reverse_frame_3 - 0.08 12.4 0.5 0.099 12.1 0.5 1.0 1 0 0 1 1 1 0 ICEA Protein Herpes_IE68 PF02479.16 NODE_58587_length_286_cov_1.123506_g50648_i0reverse_frame_3 - 0.11 12.1 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus immediate early protein Lamprin PF06403.11 NODE_58585_length_286_cov_1.163347_g50646_i0forward_frame_2 - 0.85 9.6 9.4 2.7 8.0 9.4 1.8 1 1 0 1 1 1 0 Lamprin FANCI_HD1 PF14679.6 NODE_58584_length_286_cov_1.223108_g50645_i0reverse_frame_2 - 0.19 11.7 1.1 4.1 7.4 0.3 2.1 2 0 0 2 2 2 0 FANCI helical domain 1 Omega-toxin PF06357.11 NODE_58584_length_286_cov_1.223108_g50645_i0reverse_frame_2 - 2.7 7.9 9.4 0.27 11.1 3.2 2.1 2 0 0 2 2 2 0 Omega-atracotoxin FHA PF00498.26 NODE_58584_length_286_cov_1.223108_g50645_i0forward_frame_2 - 5.4e-09 36.3 0.3 8.7e-09 35.6 0.3 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_58584_length_286_cov_1.223108_g50645_i0forward_frame_2 - 5.5e-05 23.4 0.0 6.9e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Tash_PEST PF07708.11 NODE_58583_length_286_cov_1.239044_g50644_i0reverse_frame_3 - 0.21 11.8 0.7 0.32 11.2 0.7 1.3 1 0 0 1 1 1 0 Tash protein PEST motif AveC_like PF17198.4 NODE_58580_length_286_cov_1.270916_g50641_i0forward_frame_3 - 0.048 13.1 0.3 0.051 13.0 0.3 1.1 1 0 0 1 1 1 0 Spirocyclase AveC-like SGBP_B_XBD PF18329.1 NODE_58579_length_286_cov_1.274900_g50640_i0reverse_frame_2 - 0.032 14.2 0.1 0.032 14.2 0.1 1.2 1 0 0 1 1 1 0 Surface glycan-binding protein B xyloglucan binding domain Nramp PF01566.18 NODE_58578_length_286_cov_1.306773_g50639_i0forward_frame_3 - 2.6e-15 56.3 0.1 3e-15 56.1 0.1 1.1 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein zn-ribbon_14 PF16503.5 NODE_58577_length_286_cov_1.334661_g50638_i0forward_frame_2 - 0.0021 17.5 2.2 0.0039 16.6 2.2 1.5 1 0 0 1 1 1 1 Zinc-ribbon DUF5527 PF17665.1 NODE_58576_length_286_cov_1.342629_g50637_i0reverse_frame_3 - 0.039 13.5 0.0 0.058 12.9 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5527) DUF1191 PF06697.12 NODE_58576_length_286_cov_1.342629_g50637_i0reverse_frame_3 - 0.2 11.4 0.0 0.24 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1191) HHH_8 PF14716.6 NODE_58575_length_286_cov_1.358566_g50636_i0forward_frame_3 - 0.065 13.6 0.3 0.14 12.5 0.4 1.5 2 0 0 2 2 2 0 Helix-hairpin-helix domain FAM75 PF14650.6 NODE_58575_length_286_cov_1.358566_g50636_i0forward_frame_2 - 0.035 13.6 0.3 0.043 13.4 0.3 1.1 1 0 0 1 1 1 0 FAM75 family HAD_SAK_1 PF10307.9 NODE_58571_length_286_cov_1.402390_g50632_i0forward_frame_2 - 0.0025 17.7 0.3 0.0029 17.4 0.3 1.0 1 0 0 1 1 1 1 HAD domain family 1 in Swiss Army Knife RNA repair proteins DUF1947 PF09183.10 NODE_58571_length_286_cov_1.402390_g50632_i0forward_frame_2 - 0.019 15.2 0.7 0.34 11.3 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) NADH_u_ox_C PF12853.7 NODE_58569_length_286_cov_1.442231_g50630_i0reverse_frame_3 - 0.034 14.1 0.2 0.036 14.1 0.2 1.2 1 0 0 1 1 1 0 C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit DUF1889 PF08986.10 NODE_58569_length_286_cov_1.442231_g50630_i0reverse_frame_2 - 0.029 14.8 0.0 0.033 14.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) TerD PF02342.18 NODE_58569_length_286_cov_1.442231_g50630_i0reverse_frame_2 - 0.036 13.5 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 TerD domain preSET_CXC PF18264.1 NODE_58569_length_286_cov_1.442231_g50630_i0reverse_frame_2 - 0.29 11.6 0.7 0.29 11.6 0.7 2.3 2 0 0 2 2 2 0 CXC domain Ion_trans_2 PF07885.16 NODE_58561_length_286_cov_1.617530_g50622_i0reverse_frame_3 - 0.007 16.3 1.5 0.0086 16.0 1.5 1.3 1 0 0 1 1 1 1 Ion channel RSN1_7TM PF02714.15 NODE_58561_length_286_cov_1.617530_g50622_i0reverse_frame_2 - 0.087 12.1 4.6 0.044 13.1 2.8 1.4 1 1 1 2 2 2 0 Calcium-dependent channel, 7TM region, putative phosphate Sec10 PF07393.11 NODE_58559_length_286_cov_1.752988_g50620_i0forward_frame_3 - 0.082 11.3 0.1 0.089 11.2 0.1 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec10 CBP4 PF07960.11 NODE_58558_length_286_cov_1.776892_g50619_i0reverse_frame_3 - 0.01 15.7 4.0 0.013 15.4 4.0 1.1 1 0 0 1 1 1 0 CBP4 DUF2828 PF11443.8 NODE_58557_length_286_cov_1.836653_g50618_i0forward_frame_3 - 0.0021 16.2 0.3 0.0022 16.2 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2828) DUF678 PF05077.12 NODE_58557_length_286_cov_1.836653_g50618_i0forward_frame_3 - 0.69 10.1 5.7 0.81 9.9 5.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF678) PID PF00640.23 NODE_58556_length_286_cov_1.860558_g50617_i0forward_frame_2 - 0.0015 18.6 0.1 0.0017 18.4 0.1 1.1 1 0 0 1 1 1 1 Phosphotyrosine interaction domain (PTB/PID) Rz1 PF06085.11 NODE_58556_length_286_cov_1.860558_g50617_i0forward_frame_2 - 0.034 13.9 0.1 0.049 13.4 0.1 1.3 1 0 0 1 1 1 0 Lipoprotein Rz1 precursor SHOCT PF09851.9 NODE_58553_length_286_cov_1.956175_g50614_i0forward_frame_2 - 0.016 14.9 0.2 0.054 13.2 0.1 2.0 2 0 0 2 2 2 0 Short C-terminal domain Baculo_RING PF05883.11 NODE_58553_length_286_cov_1.956175_g50614_i0forward_frame_2 - 0.084 12.9 0.7 0.09 12.8 0.7 1.1 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Biotin_lipoyl_2 PF13533.6 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 3.1e-08 33.3 2.2 5.4e-08 32.5 1.4 1.7 1 1 1 2 2 2 1 Biotin-lipoyl like Biotin_lipoyl PF00364.22 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 0.0011 18.8 0.5 0.0022 17.8 0.4 1.4 1 1 0 1 1 1 1 Biotin-requiring enzyme HlyD_D23 PF16576.5 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 0.004 16.4 0.1 0.0046 16.2 0.1 1.1 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 0.015 16.0 0.2 0.024 15.4 0.1 1.4 2 0 0 2 2 2 0 HlyD family secretion protein PASTA PF03793.19 NODE_58550_length_286_cov_1.988048_g50611_i0forward_frame_2 - 0.038 13.8 1.2 0.056 13.3 1.2 1.4 1 1 0 1 1 1 0 PASTA domain DUF2303 PF10065.9 NODE_58538_length_286_cov_2.215139_g50599_i0forward_frame_2 - 0.073 12.2 0.3 0.081 12.1 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) AI-2E_transport PF01594.16 NODE_58535_length_286_cov_2.342629_g50596_i0forward_frame_3 - 4.5e-18 65.5 5.2 5e-18 65.3 5.2 1.0 1 0 0 1 1 1 1 AI-2E family transporter FA_desaturase PF00487.24 NODE_58535_length_286_cov_2.342629_g50596_i0forward_frame_3 - 1.2 8.9 4.6 1.5 8.6 4.6 1.1 1 0 0 1 1 1 0 Fatty acid desaturase Csm2_III-A PF03750.13 NODE_58533_length_286_cov_2.390438_g50594_i0reverse_frame_3 - 0.1 13.5 0.0 0.14 13.0 0.0 1.2 1 0 0 1 1 1 0 Csm2 Type III-A SID-1_RNA_chan PF13965.6 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 0.022 13.2 1.9 0.024 13.1 1.9 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF4834 PF16118.5 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 0.063 14.2 2.3 0.085 13.8 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Macoilin PF09726.9 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 0.14 10.7 17.4 0.14 10.7 17.4 1.0 1 0 0 1 1 1 0 Macoilin family NPR3 PF03666.13 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 0.24 10.2 5.5 0.24 10.2 5.5 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 EphA2_TM PF14575.6 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 0.3 12.0 5.0 0.81 10.6 5.0 1.7 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Sec3_C PF09763.9 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 0.38 9.1 6.4 0.38 9.1 6.4 1.0 1 0 0 1 1 1 0 Exocyst complex component Sec3 RXLR PF16810.5 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 0.39 11.1 6.9 0.51 10.8 6.9 1.1 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity SPX PF03105.19 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 0.81 9.5 12.8 0.76 9.6 12.8 1.0 1 0 0 1 1 1 0 SPX domain Apt1 PF10351.9 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 0.84 8.4 17.0 0.81 8.5 17.0 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Spem1 PF15670.5 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 1.7 8.1 7.8 2 8.0 7.8 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 SSP160 PF06933.11 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 1.8 6.7 26.5 2 6.5 26.5 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 NAM-associated PF14303.6 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_3 - 7.8 7.2 11.0 9.9 6.8 11.0 1.2 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain DUF4834 PF16118.5 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_2 - 0.016 16.2 5.8 0.019 16.0 5.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Cadherin_C_2 PF16492.5 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_2 - 0.11 13.3 0.2 0.15 12.8 0.2 1.3 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal PBP1_TM PF14812.6 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_2 - 2.3 8.6 6.3 3.1 8.2 6.3 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Presenilin PF01080.17 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_2 - 2.3 6.9 8.1 2.5 6.8 8.1 1.1 1 0 0 1 1 1 0 Presenilin Spt20 PF12090.8 NODE_58532_length_286_cov_2.398406_g50593_i0reverse_frame_2 - 6 6.4 22.6 6.6 6.3 22.6 1.0 1 0 0 1 1 1 0 Spt20 family DUF3275 PF11679.8 NODE_58532_length_286_cov_2.398406_g50593_i0forward_frame_3 - 4.2 7.3 5.2 4.9 7.1 5.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) Metallothi_Euk2 PF12809.7 NODE_58530_length_286_cov_2.438247_g50591_i0forward_frame_3 - 0.04 14.2 4.0 0.057 13.7 4.0 1.4 1 0 0 1 1 1 0 Eukaryotic metallothionein BCMA-Tall_bind PF09257.10 NODE_58530_length_286_cov_2.438247_g50591_i0forward_frame_3 - 6.1 7.0 9.6 1.9 8.7 5.2 2.3 1 1 1 2 2 2 0 BCMA, TALL-1 binding Peptidase_C74 PF12387.8 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_3 - 0.16 11.4 2.8 0.19 11.2 2.8 1.1 1 0 0 1 1 1 0 Pestivirus NS2 peptidase ABC_tran PF00005.27 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 2.6e-18 66.9 0.0 3e-18 66.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.00054 19.9 0.0 0.00059 19.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.001 18.9 0.0 0.0011 18.8 0.0 1.0 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.0012 18.6 1.5 0.0014 18.4 0.8 1.5 1 1 1 2 2 2 1 P-loop containing region of AAA domain AAA_5 PF07728.14 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.013 15.5 0.1 0.018 15.1 0.1 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) APS_kinase PF01583.20 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.015 15.2 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_16 PF13191.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.016 15.6 0.0 0.021 15.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.017 14.7 0.1 0.028 14.0 0.1 1.4 1 1 0 1 1 1 0 AAA domain Ploopntkinase3 PF18751.1 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.021 14.8 0.0 0.025 14.5 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 Zeta_toxin PF06414.12 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.036 13.3 0.0 0.037 13.3 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin AAA_13 PF13166.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.037 12.7 0.0 0.037 12.7 0.0 1.0 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.048 14.2 0.1 0.055 14.0 0.1 1.1 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.055 12.8 0.0 0.061 12.7 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Ploopntkinase1 PF18748.1 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.057 12.9 0.0 0.07 12.6 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase1 AAA_33 PF13671.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.085 13.0 0.0 0.091 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.14 12.4 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.16 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase NACHT PF05729.12 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.17 11.8 0.1 0.23 11.4 0.1 1.3 1 0 0 1 1 1 0 NACHT domain Thymidylate_kin PF02223.17 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.23 11.1 0.0 0.29 10.8 0.0 1.1 1 0 0 1 1 1 0 Thymidylate kinase G-alpha PF00503.20 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.26 10.4 0.0 0.27 10.3 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_30 PF13604.6 NODE_58529_length_286_cov_2.545817_g50590_i0forward_frame_2 - 0.27 10.9 0.0 0.33 10.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain CotJB PF12652.7 NODE_58527_length_286_cov_2.673307_g50588_i0forward_frame_3 - 0.052 13.8 0.4 0.067 13.4 0.4 1.3 1 0 0 1 1 1 0 CotJB protein Anp1 PF03452.14 NODE_58527_length_286_cov_2.673307_g50588_i0forward_frame_3 - 0.1 12.0 0.1 0.12 11.8 0.1 1.0 1 0 0 1 1 1 0 Anp1 NTR PF01759.21 NODE_58526_length_286_cov_2.693227_g50587_i0reverse_frame_3 - 0.098 12.5 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 UNC-6/NTR/C345C module UN_NPL4 PF11543.8 NODE_58526_length_286_cov_2.693227_g50587_i0reverse_frame_2 - 1.2e-05 25.6 0.0 1.6e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Nuclear pore localisation protein NPL4 E1_UFD PF09358.10 NODE_58526_length_286_cov_2.693227_g50587_i0reverse_frame_2 - 0.0022 18.7 0.0 0.0024 18.5 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin fold domain ubiquitin PF00240.23 NODE_58526_length_286_cov_2.693227_g50587_i0reverse_frame_2 - 0.097 12.4 0.5 0.4 10.4 0.5 1.9 1 1 0 1 1 1 0 Ubiquitin family Ubiquitin_4 PF18036.1 NODE_58526_length_286_cov_2.693227_g50587_i0reverse_frame_2 - 0.15 12.1 0.5 0.7 10.0 0.5 2.0 1 1 0 1 1 1 0 Ubiquitin-like domain DUF4888 PF16229.5 NODE_58526_length_286_cov_2.693227_g50587_i0forward_frame_2 - 0.15 12.0 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4888) S_4TM PF18159.1 NODE_58526_length_286_cov_2.693227_g50587_i0forward_frame_2 - 1.1 8.5 3.5 1.4 8.1 3.5 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Rick_17kDa_Anti PF05433.15 NODE_58525_length_286_cov_2.697211_g50586_i0forward_frame_3 - 5.3e-05 23.0 3.6 7.9e-05 22.4 3.6 1.2 1 0 0 1 1 1 1 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 NODE_58525_length_286_cov_2.697211_g50586_i0forward_frame_3 - 0.0015 18.5 2.7 0.002 18.1 2.7 1.2 1 0 0 1 1 1 1 Glycine zipper Gly-zipper_YMGG PF13441.6 NODE_58525_length_286_cov_2.697211_g50586_i0forward_frame_3 - 0.0046 16.7 1.1 0.0059 16.3 1.1 1.1 1 0 0 1 1 1 1 YMGG-like Gly-zipper TMEM52 PF14979.6 NODE_58524_length_286_cov_2.768924_g50585_i0forward_frame_3 - 5.5 6.9 9.4 7.2 6.5 9.4 1.2 1 0 0 1 1 1 0 Transmembrane 52 LapA_dom PF06305.11 NODE_58523_length_286_cov_2.808765_g50584_i0forward_frame_2 - 0.11 12.3 0.3 0.11 12.3 0.3 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Glyco_trans_1_4 PF13692.6 NODE_58521_length_286_cov_2.828685_g50582_i0reverse_frame_2 - 0.053 14.0 0.0 0.061 13.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 zf-H2C2_2 PF13465.6 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 1.2e-07 31.9 0.5 1.2e-07 31.9 0.5 4.1 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 5.3e-05 23.7 23.8 0.00065 20.3 0.9 3.3 2 1 1 3 3 3 2 C2H2-type zinc finger BolA PF01722.18 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.00094 19.4 0.2 0.0011 19.1 0.2 1.2 1 0 0 1 1 1 1 BolA-like protein zf-C2H2 PF00096.26 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.00099 19.4 1.4 0.00099 19.4 1.4 3.3 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.0012 19.1 1.1 0.0012 19.1 1.1 3.5 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.0055 17.1 18.0 0.021 15.2 0.6 3.5 3 0 0 3 3 3 2 Zinc-finger of C2H2 type zf-BED PF02892.15 NODE_58518_length_286_cov_2.952191_g50579_i0reverse_frame_3 - 0.029 14.4 2.8 0.029 14.4 2.8 2.5 2 0 0 2 2 2 0 BED zinc finger MFS_1 PF07690.16 NODE_58517_length_286_cov_3.059761_g50578_i0reverse_frame_3 - 2.1e-07 30.2 2.6 2.5e-07 29.9 2.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1_like PF12832.7 NODE_58517_length_286_cov_3.059761_g50578_i0reverse_frame_3 - 0.0023 16.9 1.4 0.0041 16.0 1.4 1.5 1 1 0 1 1 1 1 MFS_1 like family MFS_2 PF13347.6 NODE_58517_length_286_cov_3.059761_g50578_i0reverse_frame_3 - 0.027 13.0 5.1 0.032 12.8 5.1 1.0 1 0 0 1 1 1 0 MFS/sugar transport protein DUF2544 PF11245.8 NODE_58516_length_286_cov_3.067729_g50577_i0forward_frame_3 - 1.5e-28 100.0 0.2 1.6e-28 99.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2544) Laterosporulin PF17861.1 NODE_58515_length_286_cov_3.111554_g50576_i0forward_frame_2 - 0.047 14.1 0.1 0.083 13.3 0.1 1.4 1 1 0 1 1 1 0 Laterosporulin defensin-like peptide SUB1_ProdP9 PF18213.1 NODE_58513_length_286_cov_3.637450_g50574_i0forward_frame_3 - 0.1 12.4 0.7 0.14 12.0 0.7 1.3 1 1 0 1 1 1 0 SUB1 protease Prodomain ProdP9 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks280.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks280.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks280.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks280.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LAGLIDADG_WhiA PF14527.6 NODE_58510_length_286_cov_4.426295_g50571_i0forward_frame_3 - 0.11 12.5 0.7 0.2 11.7 0.3 1.6 1 1 1 2 2 2 0 WhiA LAGLIDADG-like domain Cdc13_OB4_dimer PF18233.1 NODE_58505_length_286_cov_32.027888_g50566_i0forward_frame_2 - 0.063 13.4 0.1 0.094 12.9 0.1 1.3 1 0 0 1 1 1 0 Cdc13 OB4 dimerization domain Serpentine_r_xa PF03383.15 NODE_58502_length_286_cov_34.410359_g50563_i0forward_frame_3 - 0.44 10.5 5.5 0.53 10.3 5.5 1.1 1 0 0 1 1 1 0 Caenorhabditis serpentine receptor-like protein, class xa DHHC PF01529.20 NODE_58501_length_286_cov_37.398406_g50562_i0reverse_frame_3 - 0.048 13.8 0.7 0.057 13.5 0.7 1.0 1 0 0 1 1 1 0 DHHC palmitoyltransferase LapA_dom PF06305.11 NODE_58501_length_286_cov_37.398406_g50562_i0reverse_frame_3 - 0.17 11.8 2.3 0.6 10.0 0.5 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DUF3908 PF13048.6 NODE_58500_length_286_cov_37.625498_g50561_i0forward_frame_3 - 0.015 15.5 1.5 0.018 15.3 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3908) Grp7_allergen PF16984.5 NODE_58500_length_286_cov_37.625498_g50561_i0forward_frame_2 - 0.053 13.6 1.2 0.058 13.4 1.2 1.2 1 0 0 1 1 1 0 Group 7 allergen Piezo_RRas_bdg PF12166.8 NODE_58494_length_286_cov_53.039841_g50555_i0reverse_frame_2 - 1.3e-18 67.5 0.3 1.4e-18 67.4 0.3 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain DUF4656 PF15551.6 NODE_58493_length_286_cov_55.023904_g50554_i0forward_frame_3 - 7.4 6.0 7.3 8.9 5.7 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) DUF4993 PF16384.5 NODE_58492_length_286_cov_55.330677_g50553_i0forward_frame_2 - 0.014 14.4 0.1 0.016 14.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function Peptidase_C31 PF05410.13 NODE_58490_length_286_cov_56.382470_g50551_i0reverse_frame_2 - 0.0078 16.3 1.2 0.0091 16.1 1.2 1.2 1 1 0 1 1 1 1 Porcine arterivirus-type cysteine proteinase alpha Amb_V_allergen PF03913.13 NODE_58490_length_286_cov_56.382470_g50551_i0forward_frame_3 - 0.062 13.2 1.3 0.062 13.2 1.3 1.6 2 0 0 2 2 2 0 Amb V Allergen Exog_C PF18026.1 NODE_58487_length_286_cov_60.884462_g50548_i0forward_frame_2 - 0.048 13.7 0.1 0.14 12.2 0.0 1.8 2 0 0 2 2 2 0 Endo/exonuclease (EXOG) C-terminal domain zf-RING_2 PF13639.6 NODE_58485_length_286_cov_62.565737_g50546_i0reverse_frame_3 - 0.13 12.6 4.4 0.23 11.8 4.4 1.5 1 0 0 1 1 1 0 Ring finger domain XPA_C PF05181.12 NODE_58485_length_286_cov_62.565737_g50546_i0forward_frame_3 - 0.1 12.6 0.5 0.15 12.1 0.5 1.3 1 0 0 1 1 1 0 XPA protein C-terminus Acid_PPase PF12689.7 NODE_58484_length_286_cov_63.673307_g50545_i0forward_frame_3 - 6.6e-09 35.8 0.0 7.9e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 Acid Phosphatase LpxD PF04613.14 NODE_58484_length_286_cov_63.673307_g50545_i0forward_frame_3 - 0.1 12.4 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD UPA PF17217.3 NODE_58482_length_286_cov_69.007968_g50543_i0reverse_frame_2 - 0.067 13.1 0.4 0.078 12.9 0.4 1.0 1 0 0 1 1 1 0 UPA domain YafO_toxin PF13957.6 NODE_58482_length_286_cov_69.007968_g50543_i0forward_frame_3 - 0.059 13.4 0.1 0.072 13.1 0.1 1.1 1 0 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system DPM2 PF07297.12 NODE_58482_length_286_cov_69.007968_g50543_i0forward_frame_3 - 0.075 13.3 0.4 0.13 12.6 0.4 1.4 1 1 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) VSP PF03302.13 NODE_58482_length_286_cov_69.007968_g50543_i0forward_frame_2 - 0.00028 19.9 7.2 0.00034 19.6 7.2 1.2 1 0 0 1 1 1 1 Giardia variant-specific surface protein Fer4_4 PF12800.7 NODE_58482_length_286_cov_69.007968_g50543_i0forward_frame_2 - 6.7 7.5 16.6 23 5.8 1.1 3.5 2 1 1 3 3 3 0 4Fe-4S binding domain PARG_cat PF05028.14 NODE_58476_length_286_cov_92.187251_g50537_i0reverse_frame_2 - 0.071 12.4 0.2 0.078 12.2 0.2 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) Toxin_2 PF00451.19 NODE_58472_length_286_cov_105.039841_g50533_i0forward_frame_3 - 0.19 12.1 1.5 0.19 12.1 1.5 2.7 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 ATP-synt_8 PF00895.20 NODE_58472_length_286_cov_105.039841_g50533_i0forward_frame_2 - 5.7 7.5 10.7 13 6.3 2.7 2.3 2 0 0 2 2 2 0 ATP synthase protein 8 Transposase_24 PF03004.14 NODE_58469_length_286_cov_112.788845_g50530_i0forward_frame_3 - 0.0027 17.8 0.2 0.0027 17.8 0.2 1.7 1 1 1 2 2 2 1 Plant transposase (Ptta/En/Spm family) Ion_trans PF00520.31 NODE_58468_length_286_cov_116.215139_g50529_i0reverse_frame_2 - 0.025 13.8 0.2 0.03 13.6 0.2 1.0 1 0 0 1 1 1 0 Ion transport protein I-EGF_1 PF18372.1 NODE_58467_length_286_cov_124.438247_g50528_i0forward_frame_2 - 0.027 14.6 0.2 0.052 13.7 0.2 1.5 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 YMF19 PF02326.15 NODE_58466_length_286_cov_125.872510_g50527_i0forward_frame_2 - 0.078 13.8 0.9 0.081 13.7 0.9 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 RTC PF01137.21 NODE_58465_length_286_cov_129.286853_g50526_i0reverse_frame_3 - 0.072 12.3 0.0 0.087 12.0 0.0 1.0 1 0 0 1 1 1 0 RNA 3'-terminal phosphate cyclase zf-rbx1 PF12678.7 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 6.5e-10 39.1 2.3 1e-09 38.5 2.3 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 9.4e-08 32.3 5.8 1.1e-07 32.1 3.5 1.9 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 1.4e-07 31.2 3.8 1.4e-07 31.2 3.8 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 5.2e-07 29.5 5.2 1.8e-06 27.8 3.4 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_11 PF17123.5 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 6.7e-05 22.5 3.9 0.00083 19.0 1.0 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-ANAPC11 PF12861.7 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.00016 21.7 4.1 0.00046 20.2 4.1 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.00047 19.9 4.2 0.0011 18.8 2.6 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.00099 18.9 5.8 0.002 17.9 4.2 2.0 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.0024 17.7 9.4 0.0079 16.0 9.5 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.0088 15.6 3.3 0.0095 15.5 1.1 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.022 14.8 2.0 0.022 14.8 2.0 2.5 2 1 0 2 2 2 0 RING-type zinc-finger Zn-ribbon_8 PF09723.10 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.033 14.3 1.2 0.033 14.3 1.2 1.7 2 0 0 2 2 2 0 Zinc ribbon domain zf-RING_9 PF13901.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.039 13.9 2.2 0.048 13.6 2.2 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zf-C3HC4_4 PF15227.6 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.21 11.8 6.5 0.24 11.6 4.3 2.2 2 1 1 3 3 3 0 zinc finger of C3HC4-type, RING GAGA PF09237.11 NODE_58464_length_286_cov_130.609562_g50525_i0reverse_frame_3 - 0.27 11.1 2.0 0.99 9.3 1.6 2.0 2 1 0 2 2 2 0 GAGA factor SNAPc_SNAP43 PF09808.9 NODE_58464_length_286_cov_130.609562_g50525_i0forward_frame_2 - 0.0053 16.7 2.1 0.0053 16.7 2.1 1.1 1 0 0 1 1 1 1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 Sigma_reg_N PF13800.6 NODE_58463_length_286_cov_223.055777_g50524_i0forward_frame_3 - 2.5 8.4 7.1 0.26 11.6 1.8 1.8 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF2633 PF11119.8 NODE_58463_length_286_cov_223.055777_g50524_i0forward_frame_2 - 1.1 9.2 3.9 2 8.4 3.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) DUF3287 PF11690.8 NODE_58461_length_286_cov_257.430279_g50522_i0forward_frame_2 - 0.12 12.0 0.3 0.16 11.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) ShK PF01549.24 NODE_58458_length_286_cov_319.525896_g50519_i0reverse_frame_3 - 0.083 13.4 1.2 0.083 13.4 1.2 2.3 3 0 0 3 3 3 0 ShK domain-like DUF2012 PF09430.10 NODE_58453_length_286_cov_1214.832669_g50514_i0reverse_frame_3 - 8.5e-05 22.7 0.0 0.0001 22.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2012) Y_Y_Y PF07495.13 NODE_58453_length_286_cov_1214.832669_g50514_i0reverse_frame_3 - 0.012 15.6 0.1 0.018 15.0 0.1 1.3 1 0 0 1 1 1 0 Y_Y_Y domain CarboxypepD_reg PF13620.6 NODE_58453_length_286_cov_1214.832669_g50514_i0reverse_frame_3 - 0.058 13.7 0.0 0.086 13.1 0.0 1.4 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain UNC119_bdg PF15435.6 NODE_58451_length_286_cov_5387.852590_g50512_i0reverse_frame_3 - 0.0034 17.0 0.2 0.0041 16.7 0.2 1.1 1 0 0 1 1 1 1 UNC119-binding protein C5orf30 homologue Glyco_transf_20 PF00982.21 NODE_58450_length_286_cov_125968.633466_g50511_i0forward_frame_2 - 6.4 5.3 6.8 7.8 5.0 6.8 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 LRR_5 PF13306.6 NODE_58447_length_287_cov_1.166667_g50508_i0forward_frame_3 - 0.029 14.3 2.7 0.042 13.8 2.2 1.4 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) TMEM154 PF15102.6 NODE_58445_length_287_cov_1.246032_g50506_i0reverse_frame_2 - 0.46 10.4 2.6 0.72 9.8 2.6 1.3 1 0 0 1 1 1 0 TMEM154 protein family DUF3446 PF11928.8 NODE_58441_length_287_cov_1.269841_g50502_i0reverse_frame_3 - 0.0099 16.2 0.0 0.012 15.9 0.0 1.1 1 0 0 1 1 1 1 Early growth response N-terminal domain zf-C2H2_3rep PF18868.1 NODE_58439_length_287_cov_1.289683_g50500_i0reverse_frame_3 - 0.0065 17.1 0.4 0.0082 16.8 0.4 1.3 1 1 0 1 1 1 1 Zinc finger C2H2-type, 3 repeats CxC1 PF18802.1 NODE_58438_length_287_cov_1.361111_g50499_i0reverse_frame_3 - 0.028 14.6 0.7 0.034 14.3 0.7 1.2 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases Mtp PF03821.16 NODE_58436_length_287_cov_1.408730_g50497_i0forward_frame_3 - 0.03 13.9 0.1 0.034 13.8 0.1 1.1 1 0 0 1 1 1 0 Golgi 4-transmembrane spanning transporter XPA_N PF01286.18 NODE_58431_length_287_cov_1.507937_g50492_i0reverse_frame_2 - 0.58 10.2 4.4 1.1 9.4 4.4 1.5 1 0 0 1 1 1 0 XPA protein N-terminal Fer4_15 PF13459.6 NODE_58430_length_287_cov_1.515873_g50491_i0reverse_frame_3 - 0.031 15.0 0.0 0.05 14.3 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain RINGv PF12906.7 NODE_58429_length_287_cov_1.559524_g50490_i0reverse_frame_2 - 0.028 14.5 4.1 0.028 14.5 4.1 2.0 2 0 0 2 2 2 0 RING-variant domain DUF1366 PF07104.11 NODE_58427_length_287_cov_1.630952_g50488_i0reverse_frame_2 - 0.18 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1366) DnaJ PF00226.31 NODE_58427_length_287_cov_1.630952_g50488_i0forward_frame_3 - 6e-05 23.1 0.4 9.1e-05 22.5 0.4 1.3 1 0 0 1 1 1 1 DnaJ domain DnaJ PF00226.31 NODE_58427_length_287_cov_1.630952_g50488_i0forward_frame_2 - 5.1e-07 29.7 0.3 7.5e-07 29.2 0.3 1.2 1 0 0 1 1 1 1 DnaJ domain Mto2_bdg PF12808.7 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.0022 18.2 1.7 0.0045 17.2 1.7 1.5 1 0 0 1 1 1 1 Micro-tubular organiser Mto1 C-term Mto2-binding region DUF4763 PF15960.5 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.0041 16.5 4.3 0.0047 16.3 4.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) TolA_bind_tri PF16331.5 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.0098 16.0 4.0 0.014 15.5 4.0 1.3 1 0 0 1 1 1 1 TolA binding protein trimerisation ATG16 PF08614.11 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.011 15.9 2.0 0.011 15.9 2.0 1.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) MCC-bdg_PDZ PF10506.9 NODE_58421_length_287_cov_1.730159_g50482_i0reverse_frame_3 - 0.023 14.7 3.2 0.12 12.4 1.5 2.0 1 1 1 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Ta0938 PF11494.8 NODE_58418_length_287_cov_1.845238_g50479_i0forward_frame_3 - 0.056 13.7 1.1 0.064 13.5 1.1 1.0 1 0 0 1 1 1 0 Ta0938 CPBP PF02517.16 NODE_58417_length_287_cov_1.853175_g50478_i0forward_frame_2 - 0.0019 18.5 0.5 0.0023 18.2 0.5 1.2 1 0 0 1 1 1 1 CPBP intramembrane metalloprotease CybS PF05328.12 NODE_58416_length_287_cov_1.853175_g50477_i0reverse_frame_2 - 0.051 13.3 2.0 0.057 13.1 2.0 1.2 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit AAA_31 PF13614.6 NODE_58415_length_287_cov_1.896825_g50476_i0reverse_frame_3 - 0.15 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain NADH-G_4Fe-4S_3 PF10588.9 NODE_58413_length_287_cov_2.003968_g50474_i0reverse_frame_3 - 0.031 13.8 3.3 0.15 11.6 0.7 2.5 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Ion_trans PF00520.31 NODE_58413_length_287_cov_2.003968_g50474_i0reverse_frame_2 - 4e-07 29.5 0.7 4.8e-07 29.2 0.7 1.1 1 0 0 1 1 1 1 Ion transport protein Flag1_repress PF03614.13 NODE_58412_length_287_cov_2.007937_g50473_i0forward_frame_3 - 0.071 12.9 0.1 0.08 12.7 0.1 1.0 1 0 0 1 1 1 0 Repressor of phase-1 flagellin Zea_mays_MuDR PF05928.11 NODE_58411_length_287_cov_2.007937_g50472_i0reverse_frame_3 - 0.19 11.3 0.1 0.22 11.2 0.1 1.0 1 0 0 1 1 1 0 Zea mays MURB-like protein (MuDR) MatE PF01554.18 NODE_58411_length_287_cov_2.007937_g50472_i0forward_frame_3 - 9.7e-05 22.1 1.8 0.00014 21.6 1.8 1.3 1 0 0 1 1 1 1 MatE Oxidored_q5_N PF01059.17 NODE_58411_length_287_cov_2.007937_g50472_i0forward_frame_3 - 0.025 14.7 3.8 0.041 14.0 3.8 1.4 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Crystall PF00030.19 NODE_58411_length_287_cov_2.007937_g50472_i0forward_frame_3 - 0.089 13.0 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Beta/Gamma crystallin A2L_zn_ribbon PF08792.10 NODE_58410_length_287_cov_2.059524_g50471_i0reverse_frame_3 - 0.06 13.1 1.3 0.27 11.0 0.4 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF865 PF05906.11 NODE_58410_length_287_cov_2.059524_g50471_i0forward_frame_3 - 1.3 8.9 3.8 0.76 9.6 0.4 2.0 2 0 0 2 2 2 0 Herpesvirus-7 repeat of unknown function (DUF865) Defensin_like PF10868.8 NODE_58408_length_287_cov_2.083333_g50469_i0reverse_frame_3 - 0.31 11.8 6.6 1.6 9.5 2.3 2.4 2 1 0 2 2 2 0 Cysteine-rich antifungal protein 2, defensin-like Retinal PF15449.6 NODE_58408_length_287_cov_2.083333_g50469_i0forward_frame_2 - 1.7 6.3 6.9 1.4 6.6 6.9 1.0 1 0 0 1 1 1 0 Retinal protein DUF4186 PF13811.6 NODE_58407_length_287_cov_2.095238_g50468_i0reverse_frame_2 - 0.043 13.9 0.7 0.058 13.4 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) DUF4728 PF15860.5 NODE_58407_length_287_cov_2.095238_g50468_i0forward_frame_3 - 0.14 12.8 3.5 0.17 12.6 3.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4728) EamA PF00892.20 NODE_58407_length_287_cov_2.095238_g50468_i0forward_frame_2 - 0.012 15.8 0.0 0.012 15.8 0.0 1.0 1 0 0 1 1 1 0 EamA-like transporter family IPK PF03770.16 NODE_58406_length_287_cov_2.126984_g50467_i0reverse_frame_3 - 0.0054 16.6 0.3 0.0057 16.5 0.3 1.0 1 0 0 1 1 1 1 Inositol polyphosphate kinase DUF2111 PF09884.9 NODE_58406_length_287_cov_2.126984_g50467_i0reverse_frame_3 - 0.13 12.3 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2111) DnaJ PF00226.31 NODE_58406_length_287_cov_2.126984_g50467_i0reverse_frame_2 - 1.4e-24 86.0 0.4 1.6e-24 85.8 0.4 1.1 1 0 0 1 1 1 1 DnaJ domain DUF5311 PF17238.2 NODE_58405_length_287_cov_2.130952_g50466_i0reverse_frame_2 - 0.0095 15.9 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5311) Phage_tail_X PF05489.12 NODE_58405_length_287_cov_2.130952_g50466_i0forward_frame_3 - 0.16 11.7 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Phage Tail Protein X Flu_M1 PF00598.19 NODE_58404_length_287_cov_2.146825_g50465_i0reverse_frame_2 - 0.02 14.4 0.3 0.026 14.0 0.3 1.1 1 0 0 1 1 1 0 Influenza Matrix protein (M1) Tropomodulin PF03250.14 NODE_58401_length_287_cov_2.218254_g50462_i0reverse_frame_3 - 0.054 13.6 0.1 0.07 13.2 0.1 1.1 1 0 0 1 1 1 0 Tropomodulin GST_C_6 PF17171.4 NODE_58397_length_287_cov_2.297619_g50458_i0reverse_frame_2 - 0.13 12.1 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Ricin_B_lectin PF00652.22 NODE_58395_length_287_cov_2.357143_g50456_i0reverse_frame_2 - 2.3e-09 37.5 0.3 2.9e-09 37.3 0.3 1.1 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain Peptidase_M90 PF06167.12 NODE_58394_length_287_cov_2.380952_g50455_i0reverse_frame_3 - 1.4e-23 83.8 0.2 1.6e-23 83.6 0.2 1.0 1 0 0 1 1 1 1 Glucose-regulated metallo-peptidase M90 CCD48 PF15799.5 NODE_58394_length_287_cov_2.380952_g50455_i0reverse_frame_3 - 0.17 10.1 0.0 0.2 9.9 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 Furin-like PF00757.20 NODE_58391_length_287_cov_2.424603_g50452_i0reverse_frame_2 - 0.041 13.8 3.3 0.046 13.6 3.3 1.1 1 0 0 1 1 1 0 Furin-like cysteine rich region VGCC_alpha2 PF08473.11 NODE_58389_length_287_cov_2.496032_g50450_i0reverse_frame_2 - 0.066 12.0 0.0 0.078 11.8 0.0 1.0 1 0 0 1 1 1 0 Neuronal voltage-dependent calcium channel alpha 2acd BCMA-Tall_bind PF09257.10 NODE_58388_length_287_cov_2.515873_g50449_i0reverse_frame_3 - 0.84 9.8 7.9 2.9 8.0 7.9 2.0 1 1 0 1 1 1 0 BCMA, TALL-1 binding DUF2527 PF10736.9 NODE_58387_length_287_cov_2.591270_g50448_i0forward_frame_3 - 0.043 13.6 0.6 0.13 12.1 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) DUF1891 PF09004.10 NODE_58383_length_287_cov_2.670635_g50444_i0reverse_frame_3 - 0.049 13.2 0.3 0.084 12.5 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1891) E1-E2_ATPase PF00122.20 NODE_58383_length_287_cov_2.670635_g50444_i0forward_frame_3 - 5.9e-07 29.2 1.9 6.1e-07 29.1 1.9 1.0 1 0 0 1 1 1 1 E1-E2 ATPase Myotub-related PF06602.14 NODE_58381_length_287_cov_2.730159_g50442_i0reverse_frame_2 - 0.18 10.7 0.5 0.18 10.7 0.5 1.0 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain RepA1_leader PF08048.12 NODE_58381_length_287_cov_2.730159_g50442_i0reverse_frame_2 - 3.3 8.1 4.9 0.4 11.0 0.9 1.6 2 0 0 2 2 2 0 Tap RepA1 leader peptide DUF1947 PF09183.10 NODE_58381_length_287_cov_2.730159_g50442_i0forward_frame_2 - 0.18 12.2 0.4 0.33 11.3 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1947) PTS-HPr PF00381.19 NODE_58379_length_287_cov_2.757937_g50440_i0reverse_frame_3 - 3.6e-25 88.0 0.1 4.2e-25 87.8 0.1 1.1 1 0 0 1 1 1 1 PTS HPr component phosphorylation site MG1 PF17790.1 NODE_58379_length_287_cov_2.757937_g50440_i0reverse_frame_3 - 0.081 13.4 0.0 0.14 12.6 0.0 1.5 1 1 0 1 1 1 0 Macroglobulin domain MG1 Rad50_zn_hook PF04423.14 NODE_58379_length_287_cov_2.757937_g50440_i0reverse_frame_2 - 0.68 9.8 3.4 1.3 9.0 3.4 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif Kelch_1 PF01344.25 NODE_58378_length_287_cov_2.797619_g50439_i0reverse_frame_2 - 0.074 12.7 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Kelch motif Kelch_4 PF13418.6 NODE_58378_length_287_cov_2.797619_g50439_i0reverse_frame_2 - 0.087 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_58378_length_287_cov_2.797619_g50439_i0reverse_frame_2 - 0.16 12.0 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Kelch motif PDR_assoc PF08370.11 NODE_58373_length_287_cov_3.039683_g50434_i0forward_frame_2 - 0.033 13.9 2.3 0.033 13.9 2.3 1.6 2 0 0 2 2 2 0 Plant PDR ABC transporter associated TB2_DP1_HVA22 PF03134.19 NODE_58371_length_287_cov_3.519841_g50432_i0forward_frame_2 - 0.057 13.4 0.4 0.084 12.8 0.4 1.3 1 0 0 1 1 1 0 TB2/DP1, HVA22 family MM_CoA_mutase PF01642.22 NODE_58364_length_287_cov_9.853175_g50425_i0reverse_frame_2 - 3.2e-37 128.3 0.0 3.7e-37 128.1 0.0 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase PhnI PF05861.12 NODE_58364_length_287_cov_9.853175_g50425_i0reverse_frame_2 - 0.12 11.1 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnI) Glyco_transf_25 PF01755.17 NODE_58363_length_287_cov_12.559524_g50424_i0reverse_frame_2 - 0.0063 16.4 0.6 0.0077 16.1 0.6 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) ORC4_C PF14629.6 NODE_58363_length_287_cov_12.559524_g50424_i0forward_frame_3 - 0.0081 15.5 0.2 0.0081 15.5 0.2 1.1 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 4 C-terminus AAA_assoc PF14363.6 NODE_58363_length_287_cov_12.559524_g50424_i0forward_frame_3 - 0.028 14.8 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 Domain associated at C-terminal with AAA Spore_YunB PF09560.10 NODE_58362_length_287_cov_19.293651_g50423_i0reverse_frame_3 - 0.15 12.1 0.1 0.21 11.6 0.1 1.2 1 0 0 1 1 1 0 Sporulation protein YunB (Spo_YunB) Lamprin PF06403.11 NODE_58360_length_287_cov_27.468254_g50421_i0reverse_frame_3 - 0.066 13.2 1.5 0.064 13.2 1.5 1.2 1 0 0 1 1 1 0 Lamprin C_tripleX PF02363.19 NODE_58359_length_287_cov_31.329365_g50420_i0reverse_frame_3 - 0.27 11.6 4.1 39 4.8 4.1 2.5 1 1 0 1 1 1 0 Cysteine rich repeat ATG_C PF09333.11 NODE_58353_length_287_cov_46.765873_g50414_i0reverse_frame_2 - 6.1e-10 39.3 0.0 8.7e-10 38.8 0.0 1.2 1 0 0 1 1 1 1 Autophagy-related protein C terminal domain TPR_12 PF13424.6 NODE_58351_length_287_cov_47.988095_g50412_i0reverse_frame_2 - 0.00012 22.3 0.6 0.00014 22.1 0.6 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_58351_length_287_cov_47.988095_g50412_i0reverse_frame_2 - 0.0012 18.7 0.1 0.0021 17.9 0.1 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat FAM199X PF15814.5 NODE_58351_length_287_cov_47.988095_g50412_i0forward_frame_3 - 0.025 13.6 3.5 0.029 13.4 3.5 1.0 1 0 0 1 1 1 0 Protein family FAM199X PDGF PF00341.17 NODE_58351_length_287_cov_47.988095_g50412_i0forward_frame_3 - 0.051 13.9 0.6 0.068 13.5 0.6 1.2 1 0 0 1 1 1 0 PDGF/VEGF domain POTRA_3 PF17287.2 NODE_58346_length_287_cov_58.984127_g50407_i0forward_frame_3 - 0.16 11.5 0.1 0.27 10.7 0.1 1.3 1 0 0 1 1 1 0 POTRA domain SWC7 PF17330.2 NODE_58343_length_287_cov_61.496032_g50404_i0reverse_frame_3 - 0.049 13.7 0.0 0.062 13.4 0.0 1.2 1 0 0 1 1 1 0 SWR1 chromatin-remodelling complex, sub-unit Swc7 Protamine_3 PF08188.11 NODE_58343_length_287_cov_61.496032_g50404_i0reverse_frame_2 - 0.17 12.1 0.1 0.17 12.1 0.1 1.6 2 0 0 2 2 2 0 Spermatozal protamine family DA1-like PF12315.8 NODE_58340_length_287_cov_62.619048_g50401_i0forward_frame_2 - 0.11 11.9 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein DA1 JmjN PF02375.17 NODE_58340_length_287_cov_62.619048_g50401_i0forward_frame_2 - 0.3 11.1 0.7 0.53 10.3 0.7 1.4 1 0 0 1 1 1 0 jmjN domain APC_u14 PF16635.5 NODE_58339_length_287_cov_63.273810_g50400_i0reverse_frame_3 - 6 7.5 16.6 8.8 6.9 16.6 1.3 1 1 0 1 1 1 0 Unstructured region on APC between SAMP and APC_crr Gliadin PF13016.6 NODE_58338_length_287_cov_64.285714_g50399_i0reverse_frame_2 - 0.019 15.4 0.3 0.026 14.9 0.3 1.3 1 0 0 1 1 1 0 Cys-rich Gliadin N-terminal Tweety PF04906.13 NODE_58337_length_287_cov_65.087302_g50398_i0reverse_frame_2 - 0.0053 15.5 2.1 0.0054 15.4 2.1 1.1 1 0 0 1 1 1 1 Tweety FAM163 PF15069.6 NODE_58337_length_287_cov_65.087302_g50398_i0reverse_frame_2 - 0.012 16.0 3.0 0.013 15.9 3.0 1.2 1 0 0 1 1 1 0 FAM163 family Herpes_gE PF02480.16 NODE_58337_length_287_cov_65.087302_g50398_i0reverse_frame_2 - 0.068 11.9 0.0 0.077 11.7 0.0 1.1 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E EphA2_TM PF14575.6 NODE_58337_length_287_cov_65.087302_g50398_i0reverse_frame_2 - 0.11 13.3 0.0 0.16 12.9 0.0 1.3 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain TMEM52 PF14979.6 NODE_58337_length_287_cov_65.087302_g50398_i0reverse_frame_2 - 0.18 11.8 3.8 0.22 11.5 3.8 1.2 1 0 0 1 1 1 0 Transmembrane 52 HEPPP_synt_1 PF07307.11 NODE_58337_length_287_cov_65.087302_g50398_i0forward_frame_3 - 0.14 11.8 0.0 0.15 11.6 0.0 1.0 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DUF5558 PF17713.1 NODE_58336_length_287_cov_65.218254_g50397_i0reverse_frame_2 - 0.01 16.2 0.9 0.012 16.0 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5558) NOB1_Zn_bind PF08772.11 NODE_58335_length_287_cov_68.972222_g50396_i0reverse_frame_2 - 0.19 11.9 2.9 0.76 10.0 2.9 1.8 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DUF2201_N PF13203.6 NODE_58334_length_287_cov_71.726190_g50395_i0reverse_frame_3 - 0.24 11.0 4.6 0.27 10.8 4.6 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain NACHT PF05729.12 NODE_58332_length_287_cov_74.003968_g50393_i0forward_frame_3 - 0.15 12.0 0.4 0.2 11.5 0.3 1.3 1 1 0 1 1 1 0 NACHT domain CW_7 PF08230.11 NODE_58330_length_287_cov_77.531746_g50391_i0reverse_frame_2 - 0.13 12.0 1.0 1.7 8.5 0.0 2.1 2 0 0 2 2 2 0 CW_7 repeat DUF3922 PF13059.6 NODE_58328_length_287_cov_86.615079_g50389_i0reverse_frame_3 - 0.026 14.9 0.2 0.039 14.4 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3992) DUF5102 PF17104.5 NODE_58328_length_287_cov_86.615079_g50389_i0reverse_frame_3 - 0.044 13.8 0.0 0.07 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5102) DUF2976 PF11190.8 NODE_58328_length_287_cov_86.615079_g50389_i0forward_frame_2 - 0.25 11.2 2.3 0.35 10.7 2.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) DASH_Dam1 PF08653.10 NODE_58327_length_287_cov_86.678571_g50388_i0forward_frame_3 - 0.0089 15.8 0.3 0.028 14.2 0.0 1.9 2 0 0 2 2 2 1 DASH complex subunit Dam1 Prim_Zn_Ribbon PF08273.12 NODE_58324_length_287_cov_89.611111_g50385_i0forward_frame_3 - 1.1 9.6 5.9 0.31 11.4 1.2 2.3 3 0 0 3 3 3 0 Zinc-binding domain of primase-helicase DUF4573 PF15140.6 NODE_58323_length_287_cov_91.075397_g50384_i0reverse_frame_2 - 0.0015 18.3 1.1 0.0017 18.1 1.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4573) DUF5105 PF17118.5 NODE_58323_length_287_cov_91.075397_g50384_i0reverse_frame_2 - 0.0018 18.1 0.4 0.0019 18.1 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5105) fn2 PF00040.19 NODE_58320_length_287_cov_96.119048_g50381_i0forward_frame_3 - 0.27 11.5 4.9 0.3 11.4 1.1 2.3 2 0 0 2 2 2 0 Fibronectin type II domain DnaJ PF00226.31 NODE_58318_length_287_cov_103.912698_g50379_i0reverse_frame_3 - 0.0039 17.3 0.1 0.0055 16.8 0.1 1.3 1 0 0 1 1 1 1 DnaJ domain zf-P11 PF03854.14 NODE_58316_length_287_cov_105.051587_g50377_i0reverse_frame_3 - 0.018 14.7 2.6 0.029 14.0 2.6 1.3 1 0 0 1 1 1 0 P-11 zinc finger C5HCH PF17982.1 NODE_58316_length_287_cov_105.051587_g50377_i0reverse_frame_3 - 0.12 12.6 0.7 0.56 10.4 0.1 2.1 1 1 1 2 2 2 0 NSD Cys-His rich domain MTHFR_C PF12225.8 NODE_58316_length_287_cov_105.051587_g50377_i0forward_frame_3 - 0.029 14.0 4.0 0.04 13.6 4.0 1.3 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal Orbi_NS3 PF01616.16 NODE_58315_length_287_cov_106.190476_g50376_i0reverse_frame_3 - 0.13 12.0 0.1 0.16 11.7 0.1 1.1 1 0 0 1 1 1 0 Orbivirus NS3 Adenylsucc_synt PF00709.21 NODE_58313_length_287_cov_109.785714_g50374_i0forward_frame_3 - 3.2e-18 65.9 0.0 3.4e-18 65.8 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Ribosomal_L29e PF01779.17 NODE_58307_length_287_cov_142.567460_g50368_i0reverse_frame_3 - 0.072 13.4 0.0 0.15 12.4 0.0 1.6 1 0 0 1 1 1 0 Ribosomal L29e protein family RILP PF11461.8 NODE_58305_length_287_cov_152.484127_g50366_i0reverse_frame_2 - 0.48 10.7 4.6 0.36 11.1 2.6 1.8 1 1 1 2 2 2 0 Rab interacting lysosomal protein DUF3338 PF11819.8 NODE_58301_length_287_cov_180.841270_g50362_i0reverse_frame_2 - 0.011 15.8 0.6 0.012 15.6 0.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3338) TMEM18 PF14770.6 NODE_58299_length_287_cov_194.293651_g50360_i0forward_frame_2 - 0.44 10.6 9.1 4.4 7.3 0.2 2.0 1 1 1 2 2 2 0 Transmembrane protein 18 UPF0524 PF15823.5 NODE_58299_length_287_cov_194.293651_g50360_i0forward_frame_2 - 9 5.6 8.8 4.6 6.6 7.2 1.3 1 1 0 1 1 1 0 UPF0524 of C3orf70 Lamprin PF06403.11 NODE_58297_length_287_cov_207.019841_g50358_i0reverse_frame_3 - 4.1 7.4 6.5 7.2 6.6 5.6 1.8 1 1 0 1 1 1 0 Lamprin UCH PF00443.29 NODE_58293_length_287_cov_534.329365_g50354_i0reverse_frame_2 - 1.5e-13 50.8 0.4 1.7e-13 50.6 0.4 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_58293_length_287_cov_534.329365_g50354_i0reverse_frame_2 - 7.8e-07 29.0 0.4 8.8e-07 28.8 0.4 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Popeye PF04831.13 NODE_58293_length_287_cov_534.329365_g50354_i0forward_frame_2 - 0.31 11.2 5.8 0.25 11.5 4.9 1.3 1 1 0 1 1 1 0 Popeye protein conserved region PPI_Ypi1 PF07491.11 NODE_58291_length_287_cov_837.928571_g50352_i0reverse_frame_2 - 1e-07 31.7 7.2 1e-07 31.7 7.2 2.5 2 2 0 2 2 2 1 Protein phosphatase inhibitor SR-25 PF10500.9 NODE_58291_length_287_cov_837.928571_g50352_i0reverse_frame_2 - 7.9 6.0 16.8 0.29 10.7 11.1 1.5 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein DUF3742 PF12553.8 NODE_58291_length_287_cov_837.928571_g50352_i0forward_frame_2 - 0.52 10.4 4.1 0.74 9.9 4.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) Melittin PF01372.17 NODE_58290_length_287_cov_2015.464286_g50351_i0reverse_frame_2 - 3.8 7.7 5.5 11 6.2 0.5 2.5 2 0 0 2 2 2 0 Melittin S-antigen PF05756.11 NODE_58290_length_287_cov_2015.464286_g50351_i0forward_frame_2 - 3.5 8.1 4.2 4.8 7.6 4.2 1.4 1 0 0 1 1 1 0 S-antigen protein Alpha_adaptin_C PF02296.16 NODE_58288_length_287_cov_2514.376984_g50349_i0forward_frame_3 - 0.073 13.3 0.0 0.13 12.5 0.0 1.4 1 1 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain DUF4752 PF15944.5 NODE_58285_length_288_cov_1.098814_g50346_i0reverse_frame_3 - 0.12 12.4 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) BrnA_antitoxin PF14384.6 NODE_58285_length_288_cov_1.098814_g50346_i0reverse_frame_3 - 0.26 11.8 0.6 43 4.7 0.1 3.0 2 1 0 2 2 2 0 BrnA antitoxin of type II toxin-antitoxin system DUF2013 PF09431.10 NODE_58285_length_288_cov_1.098814_g50346_i0forward_frame_3 - 0.018 15.2 0.6 0.023 14.9 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2013) T4-Gluco-transf PF09198.10 NODE_58284_length_288_cov_1.114625_g50345_i0reverse_frame_2 - 4.7 6.9 7.4 8.3 6.1 0.9 2.4 2 0 0 2 2 2 0 Bacteriophage T4 beta-glucosyltransferase DUF421 PF04239.12 NODE_58284_length_288_cov_1.114625_g50345_i0forward_frame_3 - 0.094 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF421) DUF4481 PF14800.6 NODE_58280_length_288_cov_1.229249_g50341_i0reverse_frame_2 - 0.051 13.1 0.0 0.058 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) Med9 PF07544.13 NODE_58280_length_288_cov_1.229249_g50341_i0forward_frame_3 - 0.0019 18.3 0.2 0.0031 17.6 0.2 1.4 1 0 0 1 1 1 1 RNA polymerase II transcription mediator complex subunit 9 DNA_pol3_a_NII PF11490.8 NODE_58280_length_288_cov_1.229249_g50341_i0forward_frame_3 - 0.072 13.0 0.6 0.1 12.5 0.6 1.2 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II SdrG_C_C PF10425.9 NODE_58280_length_288_cov_1.229249_g50341_i0forward_frame_2 - 0.14 12.2 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 C-terminus of bacterial fibrinogen-binding adhesin Hydrolase PF00702.26 NODE_58277_length_288_cov_1.300395_g50338_i0forward_frame_2 - 0.0048 17.2 0.0 0.0056 17.0 0.0 1.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF1638 PF07796.11 NODE_58277_length_288_cov_1.300395_g50338_i0forward_frame_2 - 0.031 14.4 0.0 0.033 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1638) FAM198 PF15051.6 NODE_58275_length_288_cov_1.320158_g50336_i0reverse_frame_3 - 0.018 13.9 0.0 0.021 13.7 0.0 1.0 1 0 0 1 1 1 0 FAM198 protein TAP_C PF03943.13 NODE_58275_length_288_cov_1.320158_g50336_i0reverse_frame_3 - 0.085 12.5 0.0 0.21 11.3 0.0 1.6 1 0 0 1 1 1 0 TAP C-terminal domain CAAP1 PF15335.6 NODE_58275_length_288_cov_1.320158_g50336_i0forward_frame_2 - 0.14 12.7 0.0 0.19 12.3 0.0 1.1 1 0 0 1 1 1 0 Caspase activity and apoptosis inhibitor 1 PAP2_C PF14360.6 NODE_58273_length_288_cov_1.371542_g50334_i0reverse_frame_3 - 1.9 9.1 9.4 0.12 12.9 2.5 2.0 2 0 0 2 2 2 0 PAP2 superfamily C-terminal Cyclin PF08613.11 NODE_58273_length_288_cov_1.371542_g50334_i0forward_frame_3 - 0.12 12.7 0.3 0.12 12.7 0.3 1.2 1 0 0 1 1 1 0 Cyclin Fer4_6 PF12837.7 NODE_58271_length_288_cov_1.442688_g50332_i0reverse_frame_3 - 0.041 14.0 0.2 0.076 13.1 0.2 1.5 1 0 0 1 1 1 0 4Fe-4S binding domain Flt3_lig PF02947.14 NODE_58269_length_288_cov_1.478261_g50330_i0reverse_frame_3 - 0.1 12.8 0.2 0.11 12.7 0.2 1.3 1 1 0 1 1 1 0 flt3 ligand Bap31 PF05529.12 NODE_58263_length_288_cov_1.592885_g50324_i0forward_frame_3 - 0.023 14.5 1.0 0.027 14.3 1.0 1.1 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region Lep_receptor_Ig PF06328.11 NODE_58263_length_288_cov_1.592885_g50324_i0forward_frame_2 - 0.032 14.2 0.5 0.032 14.2 0.5 2.0 1 1 0 1 1 1 0 Ig-like C2-type domain zf-H2C2_5 PF13909.6 NODE_58261_length_288_cov_1.675889_g50322_i0reverse_frame_3 - 5.7 6.8 6.5 1 9.2 2.8 1.7 2 0 0 2 2 2 0 C2H2-type zinc-finger domain Stathmin PF00836.19 NODE_58260_length_288_cov_1.683794_g50321_i0forward_frame_3 - 0.049 13.6 11.3 0.064 13.2 11.3 1.3 1 0 0 1 1 1 0 Stathmin family DUF1140 PF06600.11 NODE_58260_length_288_cov_1.683794_g50321_i0forward_frame_3 - 0.06 13.8 3.8 0.074 13.5 3.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1140) Prefoldin_2 PF01920.20 NODE_58260_length_288_cov_1.683794_g50321_i0forward_frame_3 - 0.44 10.5 11.3 0.65 10.0 2.6 2.1 2 0 0 2 2 2 0 Prefoldin subunit Antimicrobial12 PF08107.11 NODE_58254_length_288_cov_1.739130_g50315_i0forward_frame_3 - 0.1 12.4 0.2 0.1 12.4 0.2 1.8 3 0 0 3 3 3 0 Pleurocidin family DUF4059 PF13268.6 NODE_58253_length_288_cov_1.790514_g50314_i0reverse_frame_2 - 0.053 13.9 0.7 0.068 13.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4059) zf-LITAF-like PF10601.9 NODE_58249_length_288_cov_1.853755_g50310_i0reverse_frame_3 - 4.8 7.5 11.1 42 4.5 11.7 1.9 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain DNA_ligase_ZBD PF03119.16 NODE_58248_length_288_cov_1.885375_g50309_i0reverse_frame_3 - 0.13 12.3 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Cytochrom_C1 PF02167.15 NODE_58247_length_288_cov_1.901186_g50308_i0reverse_frame_2 - 0.081 12.6 0.0 0.083 12.6 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C1 family zf-SCNM1 PF15803.5 NODE_58246_length_288_cov_1.916996_g50307_i0forward_frame_3 - 0.00071 19.2 1.1 0.00071 19.2 1.1 2.5 2 0 0 2 2 2 1 Zinc-finger of sodium channel modifier 1 DUF3099 PF11298.8 NODE_58243_length_288_cov_1.968379_g50304_i0forward_frame_2 - 0.083 13.0 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) DUF3106 PF11304.8 NODE_58240_length_288_cov_2.015810_g50301_i0forward_frame_2 - 0.0034 17.8 0.1 0.0048 17.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3106) Phe_tRNA-synt_N PF02912.18 NODE_58240_length_288_cov_2.015810_g50301_i0forward_frame_2 - 0.034 14.1 0.0 0.053 13.5 0.0 1.2 1 0 0 1 1 1 0 Aminoacyl tRNA synthetase class II, N-terminal domain Mt_ATP-synt_B PF05405.14 NODE_58240_length_288_cov_2.015810_g50301_i0forward_frame_2 - 0.066 12.8 0.1 0.093 12.3 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) ABC_membrane PF00664.23 NODE_58239_length_288_cov_2.031621_g50300_i0reverse_frame_3 - 5.4e-18 65.6 1.0 5.7e-18 65.5 1.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF4295 PF14128.6 NODE_58238_length_288_cov_2.039526_g50299_i0reverse_frame_3 - 0.067 13.0 0.0 0.2 11.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4295) DUF5090 PF17009.5 NODE_58238_length_288_cov_2.039526_g50299_i0forward_frame_2 - 5.5 6.9 9.5 7.6 6.5 9.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Stomoxyn PF11585.8 NODE_58234_length_288_cov_2.150198_g50295_i0reverse_frame_3 - 0.016 15.2 0.7 0.026 14.5 0.7 1.3 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn WBP-1 PF11669.8 NODE_58234_length_288_cov_2.150198_g50295_i0forward_frame_2 - 0.3 11.7 3.1 0.59 10.8 3.1 1.5 1 1 0 1 1 1 0 WW domain-binding protein 1 Nucleoside_tran PF01733.18 NODE_58233_length_288_cov_2.150198_g50294_i0forward_frame_3 - 8e-06 25.4 3.1 8.1e-06 25.4 3.1 1.0 1 0 0 1 1 1 1 Nucleoside transporter DUF3098 PF11297.8 NODE_58233_length_288_cov_2.150198_g50294_i0forward_frame_3 - 0.021 14.4 0.1 0.25 10.9 0.1 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3098) Rtt106_N PF18215.1 NODE_58232_length_288_cov_2.158103_g50293_i0reverse_frame_3 - 0.11 12.3 0.8 0.21 11.4 0.2 1.8 1 1 1 2 2 2 0 Histone chaperone Rtt106 N-terminal domain UPF0203 PF05254.12 NODE_58230_length_288_cov_2.169960_g50291_i0forward_frame_3 - 0.052 13.8 0.2 0.093 13.0 0.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF3687 PF12459.8 NODE_58228_length_288_cov_2.225296_g50289_i0forward_frame_2 - 0.93 9.1 7.3 0.57 9.7 5.4 1.6 1 1 0 1 1 1 0 D-Ala-teichoic acid biosynthesis protein Epiglycanin_C PF14654.6 NODE_58226_length_288_cov_2.264822_g50287_i0reverse_frame_3 - 0.14 12.3 0.1 0.35 11.0 0.0 1.6 1 1 1 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region OAM_alpha PF16552.5 NODE_58222_length_288_cov_2.391304_g50283_i0reverse_frame_2 - 0.13 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 D-ornithine 4,5-aminomutase alpha-subunit PAS PF00989.25 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 1.9e-12 47.1 0.1 2.1e-12 47.0 0.1 1.0 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 7.7e-05 22.6 0.0 9.2e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 PAS domain PAS_7 PF12860.7 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.00012 22.2 0.0 0.00014 22.0 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.00013 22.1 0.0 0.00015 21.9 0.0 1.1 1 0 0 1 1 1 1 PAS fold DUF3361 PF11841.8 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.0021 18.0 0.1 0.0024 17.8 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3361) PAS_10 PF13596.6 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.04 14.5 0.0 0.047 14.3 0.0 1.1 1 0 0 1 1 1 0 PAS domain PAS_9 PF13426.7 NODE_58221_length_288_cov_2.470356_g50282_i0forward_frame_3 - 0.066 13.5 0.0 0.077 13.3 0.0 1.2 1 0 0 1 1 1 0 PAS domain MFS_1 PF07690.16 NODE_58220_length_288_cov_2.482213_g50281_i0forward_frame_3 - 2.2e-08 33.4 10.1 2.6e-08 33.2 10.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Cytochrom_B_C PF00032.17 NODE_58220_length_288_cov_2.482213_g50281_i0forward_frame_3 - 0.034 14.4 0.2 0.048 13.9 0.2 1.4 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD Siva PF05458.12 NODE_58218_length_288_cov_2.525692_g50279_i0reverse_frame_3 - 0.083 12.6 5.8 0.1 12.3 5.8 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) WhiA_N PF10298.9 NODE_58218_length_288_cov_2.525692_g50279_i0forward_frame_3 - 0.068 13.2 0.1 0.096 12.7 0.1 1.3 1 0 0 1 1 1 0 WhiA N-terminal LAGLIDADG-like domain DUF2284 PF10050.9 NODE_58213_length_288_cov_2.822134_g50274_i0forward_frame_2 - 0.055 13.2 0.7 0.078 12.7 0.7 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Got1 PF04178.12 NODE_58212_length_288_cov_2.893281_g50273_i0forward_frame_3 - 0.0015 19.0 3.0 0.002 18.5 2.9 1.4 1 1 0 1 1 1 1 Got1/Sft2-like family CRA PF06589.11 NODE_58211_length_288_cov_2.905138_g50272_i0reverse_frame_3 - 2.5 8.2 4.4 9.7 6.3 1.8 2.1 1 1 1 2 2 2 0 Circumsporozoite-related antigen (CRA) DUF4051 PF13260.6 NODE_58210_length_288_cov_3.391304_g50271_i0reverse_frame_2 - 6.6e-24 83.4 1.2 9.2e-24 82.9 1.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4051) DUF2621 PF11084.8 NODE_58210_length_288_cov_3.391304_g50271_i0reverse_frame_2 - 0.036 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2621) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks281.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks281.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks281.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks281.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:25:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Neuropep_like PF15161.6 NODE_58208_length_288_cov_3.446640_g50269_i0forward_frame_2 - 0.032 13.9 0.3 0.077 12.7 0.1 1.7 2 0 0 2 2 2 0 Neuropeptide-like Retinal PF15449.6 NODE_58203_length_288_cov_4.209486_g50264_i0forward_frame_3 - 1.1 7.0 6.9 1.2 6.8 6.9 1.0 1 0 0 1 1 1 0 Retinal protein ACAS_N PF16177.5 NODE_58201_length_288_cov_4.822134_g50262_i0reverse_frame_3 - 5.1e-21 74.3 0.2 6.7e-21 74.0 0.2 1.2 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus DUF3925 PF13063.6 NODE_58201_length_288_cov_4.822134_g50262_i0forward_frame_2 - 0.095 12.9 0.2 0.17 12.2 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3925) Baculo_11_kDa PF06143.11 NODE_58199_length_288_cov_5.762846_g50260_i0reverse_frame_3 - 0.056 13.0 1.3 0.083 12.5 1.3 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family SlyX PF04102.12 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.0095 16.5 0.8 0.84 10.3 0.5 2.1 2 0 0 2 2 2 1 SlyX TolA_bind_tri PF16331.5 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.012 15.7 1.9 0.27 11.3 1.1 2.2 1 1 1 2 2 2 0 TolA binding protein trimerisation PI3K_P85_iSH2 PF16454.5 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.016 14.8 0.6 0.068 12.8 0.6 1.7 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain MetW PF07021.12 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.073 12.7 0.2 0.076 12.6 0.2 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW BLOC1_2 PF10046.9 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.16 12.3 2.1 10 6.5 0.1 2.1 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DivIC PF04977.15 NODE_58197_length_288_cov_17.003953_g50258_i0reverse_frame_2 - 0.27 11.0 5.6 1.9 8.3 1.3 2.1 1 1 1 2 2 2 0 Septum formation initiator WD-3 PF09765.9 NODE_58196_length_288_cov_28.600791_g50257_i0reverse_frame_2 - 0.03 13.6 1.6 0.034 13.5 1.6 1.1 1 0 0 1 1 1 0 WD-repeat region Toxin_2 PF00451.19 NODE_58190_length_288_cov_53.565217_g50251_i0forward_frame_2 - 1.1 9.6 7.5 18 5.7 7.5 2.3 1 1 0 1 1 1 0 Scorpion short toxin, BmKK2 Pigment_DH PF06324.11 NODE_58189_length_288_cov_54.778656_g50250_i0reverse_frame_2 - 0.039 14.0 0.6 0.12 12.5 0.6 1.7 1 0 0 1 1 1 0 Pigment-dispersing hormone (PDH) Dimer_Tnp_hAT PF05699.14 NODE_58189_length_288_cov_54.778656_g50250_i0reverse_frame_2 - 2.4 8.0 11.5 0.1 12.4 4.8 1.9 1 1 1 2 2 2 0 hAT family C-terminal dimerisation region DUF347 PF03988.12 NODE_58186_length_288_cov_60.106719_g50247_i0reverse_frame_3 - 0.013 15.7 0.3 0.019 15.1 0.3 1.4 1 0 0 1 1 1 0 Repeat of Unknown Function (DUF347) MCR PF18509.1 NODE_58185_length_288_cov_61.075099_g50246_i0forward_frame_3 - 0.034 13.7 0.5 0.064 12.8 0.5 1.5 1 0 0 1 1 1 0 Magnetochrome domain Defensin_5 PF18251.1 NODE_58185_length_288_cov_61.075099_g50246_i0forward_frame_3 - 0.38 10.9 6.6 0.23 11.6 4.3 1.9 1 1 0 1 1 1 0 Fungal defensin Copsin SH3_3 PF08239.11 NODE_58183_length_288_cov_64.268775_g50244_i0reverse_frame_3 - 0.041 14.2 0.0 0.053 13.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial SH3 domain QH-AmDH_gamma PF08992.11 NODE_58181_length_288_cov_64.861660_g50242_i0reverse_frame_3 - 0.067 13.2 0.1 0.098 12.7 0.1 1.2 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, gamma subunit IGFBP PF00219.18 NODE_58181_length_288_cov_64.861660_g50242_i0forward_frame_3 - 2.4 8.9 11.5 0.46 11.2 6.7 2.0 1 1 1 2 2 2 0 Insulin-like growth factor binding protein zf-C2HCIx2C PF10782.9 NODE_58179_length_288_cov_71.276680_g50240_i0reverse_frame_3 - 0.02 14.8 0.2 0.032 14.2 0.2 1.3 1 0 0 1 1 1 0 Zinc-finger Corona_M PF01635.18 NODE_58174_length_288_cov_78.328063_g50235_i0forward_frame_3 - 3.8 6.8 11.3 4.2 6.6 11.3 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein PPIP5K2_N PF18086.1 NODE_58173_length_288_cov_82.976285_g50234_i0forward_frame_2 - 0.071 13.3 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain LacY_symp PF01306.19 NODE_58171_length_288_cov_88.454545_g50232_i0forward_frame_2 - 5.7 5.6 14.3 6 5.5 14.3 1.3 1 1 0 1 1 1 0 LacY proton/sugar symporter PUF PF00806.19 NODE_58170_length_288_cov_105.569170_g50231_i0reverse_frame_3 - 3.2e-09 36.0 0.9 3.2e-08 32.8 0.0 2.5 3 0 0 3 3 3 1 Pumilio-family RNA binding repeat Pneumovirus_M2 PF06436.11 NODE_58170_length_288_cov_105.569170_g50231_i0reverse_frame_3 - 0.022 14.3 2.1 0.025 14.1 2.1 1.1 1 0 0 1 1 1 0 Pneumovirus matrix protein 2 (M2) PaRep2b PF07775.11 NODE_58170_length_288_cov_105.569170_g50231_i0reverse_frame_3 - 0.029 12.8 0.0 0.029 12.8 0.0 1.0 1 0 0 1 1 1 0 PaRep2b protein CDC4_D PF16856.5 NODE_58170_length_288_cov_105.569170_g50231_i0forward_frame_3 - 0.15 11.9 1.6 0.32 10.9 0.2 2.0 2 0 0 2 2 2 0 Cell division control protein 4 dimerisation domain TT_ORF1 PF02956.14 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_3 - 4.9 5.7 7.2 5 5.7 7.2 1.0 1 0 0 1 1 1 0 TT viral orf 1 DUF3304 PF11745.8 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 0.021 15.2 0.2 0.023 15.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3304) RNA_polI_A34 PF08208.11 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 0.31 11.1 15.8 0.32 11.0 15.8 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Auts2 PF15336.6 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 0.72 9.9 10.5 0.78 9.8 10.5 1.1 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Presenilin PF01080.17 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 5.8 5.6 6.1 6.6 5.4 6.1 1.0 1 0 0 1 1 1 0 Presenilin MAP17 PF15807.5 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 7.3 6.9 9.8 9.5 6.5 9.8 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Coilin_N PF15862.5 NODE_58169_length_288_cov_111.960474_g50230_i0reverse_frame_2 - 7.5 6.3 17.3 9 6.1 17.3 1.1 1 0 0 1 1 1 0 Coilin N-terminus Fijivirus_P9-2 PF06837.11 NODE_58167_length_288_cov_124.296443_g50228_i0reverse_frame_3 - 0.57 9.6 8.3 0.72 9.3 8.3 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein Antimicrobial19 PF08225.11 NODE_58167_length_288_cov_124.296443_g50228_i0reverse_frame_3 - 9.8 5.9 8.0 5.7 6.7 1.4 2.7 3 0 0 3 3 3 0 Pseudin antimicrobial peptide 6PF2K PF01591.18 NODE_58167_length_288_cov_124.296443_g50228_i0forward_frame_2 - 0.023 14.0 1.1 0.028 13.7 1.1 1.0 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Transcrip_reg PF01709.20 NODE_58166_length_288_cov_136.857708_g50227_i0reverse_frame_2 - 0.04 13.3 0.0 0.047 13.1 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator Chlor_dismutase PF06778.12 NODE_58166_length_288_cov_136.857708_g50227_i0reverse_frame_2 - 0.13 11.8 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Chlorite dismutase DUF4213 PF13938.6 NODE_58166_length_288_cov_136.857708_g50227_i0forward_frame_2 - 0.015 15.5 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 Putative heavy-metal chelation SCRL PF06876.12 NODE_58166_length_288_cov_136.857708_g50227_i0forward_frame_2 - 0.63 10.3 4.1 1.9 8.8 0.1 2.2 2 0 0 2 2 2 0 Plant self-incompatibility response (SCRL) protein CxC5 PF18718.1 NODE_58165_length_288_cov_137.913043_g50226_i0reverse_frame_3 - 0.02 15.0 3.0 0.026 14.6 3.0 1.2 1 0 0 1 1 1 0 CxC5 like cysteine cluster associated with KDZ transposases DUF2587 PF10759.9 NODE_58163_length_288_cov_141.806324_g50224_i0forward_frame_3 - 0.096 12.2 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2587) Viral_cys_rich PF08008.12 NODE_58160_length_288_cov_224.754941_g50221_i0reverse_frame_2 - 0.045 13.8 0.0 0.059 13.4 0.0 1.2 1 0 0 1 1 1 0 Viral cysteine rich DAHP_snth_FXD PF18152.1 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_3 - 0.02 14.7 0.2 0.035 13.9 0.2 1.4 1 0 0 1 1 1 0 DAHP synthase ferredoxin-like domain DUF3774 PF12609.8 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_3 - 4.8 8.3 7.0 8.7 7.4 7.0 1.5 1 1 0 1 1 1 0 Wound-induced protein Glutenin_hmw PF03157.13 NODE_58155_length_288_cov_510.612648_g50216_i0reverse_frame_2 - 0.056 11.9 16.8 0.07 11.5 16.8 1.1 1 0 0 1 1 1 0 High molecular weight glutenin subunit Tim17 PF02466.19 NODE_58153_length_288_cov_653.304348_g50214_i0reverse_frame_2 - 1.4e-09 38.3 1.6 1.7e-09 38.0 1.6 1.1 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family L-fibroin PF05849.11 NODE_58153_length_288_cov_653.304348_g50214_i0reverse_frame_2 - 0.14 11.5 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Fibroin light chain (L-fibroin) Tim17 PF02466.19 NODE_58152_length_288_cov_704.225296_g50213_i0reverse_frame_2 - 1.4e-09 38.3 1.6 1.7e-09 38.0 1.6 1.1 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family L-fibroin PF05849.11 NODE_58152_length_288_cov_704.225296_g50213_i0reverse_frame_2 - 0.14 11.5 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Fibroin light chain (L-fibroin) EpCAM_N PF18635.1 NODE_58151_length_288_cov_2283.620553_g50212_i0reverse_frame_3 - 0.0017 18.5 1.5 0.0046 17.1 1.5 1.8 1 0 0 1 1 1 1 Epithelial cell adhesion molecule N-terminal domain EpCAM_N PF18635.1 NODE_58150_length_288_cov_2806.169960_g50211_i0reverse_frame_3 - 0.0017 18.5 1.5 0.0046 17.1 1.5 1.8 1 0 0 1 1 1 1 Epithelial cell adhesion molecule N-terminal domain DUF2628 PF10947.8 NODE_58149_length_288_cov_46143.094862_g50210_i0reverse_frame_3 - 0.16 12.4 3.7 0.19 12.1 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) DUF4795 PF16043.5 NODE_58149_length_288_cov_46143.094862_g50210_i0forward_frame_2 - 0.0012 18.5 0.9 0.0013 18.3 0.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) DNA_pol_P_Exo PF18049.1 ORF99261 - 0.0015 17.9 0.3 0.0016 17.9 0.3 1.1 1 0 0 1 1 1 1 DNA polymerase nu pseudo-exo DUF4920 PF16267.5 ORF97805 - 9.3 6.3 5.7 12 6.0 0.1 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4920) Xlink PF00193.17 ORF97278 - 0.021 15.2 2.6 0.65 10.4 0.5 2.1 1 1 1 2 2 2 0 Extracellular link domain Dmrt1 PF12374.8 ORF97278 - 0.74 10.3 8.6 1.7 9.1 8.6 1.6 1 1 0 1 1 1 0 Double-sex mab3 related transcription factor 1 Wbp11 PF09429.10 ORF97064 - 0.12 12.8 0.4 0.12 12.8 0.4 2.1 1 1 1 2 2 2 0 WW domain binding protein 11 DNA_pol_phi PF04931.13 ORF97064 - 9.7 4.1 16.7 11 3.9 16.7 1.0 1 0 0 1 1 1 0 DNA polymerase phi FGFR3_TM PF18123.1 ORF96881 - 8.5 6.0 9.1 1.4 8.5 1.8 2.9 2 1 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain DUF2537 PF10801.8 ORF96880 - 0.17 12.1 3.2 2 8.7 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2537) DUF1435 PF07256.12 ORF96831 - 0.035 14.2 1.3 0.035 14.2 1.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1435) DUF4116 PF13475.6 ORF96736 - 0.23 11.2 5.4 0.43 10.4 5.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4116) DUF2508 PF10704.9 ORF96599 - 0.078 13.2 1.5 0.13 12.4 1.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2508) S-antigen PF05756.11 ORF96599 - 1.3 9.4 7.5 2.1 8.7 7.5 1.6 1 1 0 1 1 1 0 S-antigen protein DNA_pol_phi PF04931.13 ORF96599 - 1.4 7.0 12.0 1.5 6.8 12.0 1.1 1 0 0 1 1 1 0 DNA polymerase phi DUF4186 PF13811.6 ORF95910 - 0.19 11.7 0.6 0.25 11.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) Ribosomal_S30AE PF02482.19 ORF95368 - 4.5e-27 94.6 0.9 5.1e-27 94.5 0.9 1.0 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein COG4 PF08318.12 ORF94546 - 0.00019 20.7 0.3 0.00022 20.4 0.3 1.0 1 0 0 1 1 1 1 COG4 transport protein FeoC PF09012.10 ORF94221 - 0.5 10.5 5.7 1 9.5 3.5 2.0 2 0 0 2 2 2 0 FeoC like transcriptional regulator MSP PF01716.18 ORF9398 - 9.6e-27 93.7 0.1 1.1e-26 93.6 0.1 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide DUF2951 PF11166.8 ORF92883 - 0.48 10.7 8.7 0.54 10.5 3.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) DUF1442 PF07279.11 ORF92713 - 0.02 14.2 0.1 0.022 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1442) DUF4212 PF13937.6 ORF92115 - 0.11 12.9 1.4 0.23 11.9 1.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4212) FAM83 PF07894.12 ORF92074 - 0.023 14.3 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 FAM83 A-H GGDEF PF00990.21 ORF90551 - 8e-10 38.7 0.0 1.6e-09 37.7 0.0 1.5 1 1 0 1 1 1 1 Diguanylate cyclase, GGDEF domain FAD-oxidase_C PF02913.19 ORF90175 - 1e-06 28.6 0.0 1.4e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain Cytokin-bind PF09265.10 ORF90175 - 0.19 11.1 0.0 0.24 10.7 0.0 1.1 1 0 0 1 1 1 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding LRRCT PF01463.24 ORF86259 - 0.73 10.5 0.3 0.73 10.5 0.3 3.7 4 0 0 4 4 4 0 Leucine rich repeat C-terminal domain LuxQ-periplasm PF09308.10 ORF85719 - 0.012 15.1 0.1 0.014 14.9 0.1 1.1 1 0 0 1 1 1 0 LuxQ, periplasmic Auxin_inducible PF02519.14 ORF85719 - 0.022 14.9 0.1 0.033 14.3 0.1 1.3 1 0 0 1 1 1 0 Auxin responsive protein Brr6_like_C_C PF10104.9 ORF85689 - 0.16 11.7 0.4 0.23 11.2 0.4 1.2 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain ETRAMP PF09716.10 ORF85276 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF3716 PF12511.8 ORF84964 - 2.3 8.3 14.0 0.2 11.7 9.5 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3716) Sec63 PF02889.16 ORF8457 - 0.073 12.2 4.8 0.067 12.3 4.0 1.3 1 1 0 1 1 1 0 Sec63 Brl domain MFS_Mycoplasma PF07672.13 ORF84414 - 0.076 12.3 0.6 0.081 12.2 0.6 1.0 1 0 0 1 1 1 0 Mycoplasma MFS transporter TMEM43 PF07787.12 ORF83906 - 0.84 9.0 4.8 2 7.7 4.8 1.5 1 1 0 1 1 1 0 Transmembrane protein 43 DUF3730 PF12530.8 ORF82543 - 0.14 11.7 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3730) EndIII_4Fe-2S PF10576.9 ORF81896 - 0.026 14.9 2.3 0.077 13.4 2.3 1.9 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III DUF1294 PF06961.13 ORF81617 - 0.07 13.4 0.0 0.25 11.6 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1294) RNHCP PF12647.7 ORF80923 - 0.018 15.0 0.0 0.03 14.3 0.0 1.4 1 0 0 1 1 1 0 RNHCP domain EF-hand_1 PF00036.32 ORF80878 - 4.3e-09 35.3 2.3 2.7e-06 26.5 0.7 2.4 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF80878 - 1.8e-07 30.5 1.3 5.2e-05 22.8 0.3 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF80878 - 7.1e-07 29.6 3.6 9.4e-07 29.2 3.6 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF80878 - 0.00011 21.5 0.8 0.0022 17.4 0.2 2.3 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF80878 - 0.0048 16.7 5.4 0.016 15.0 0.9 2.7 1 1 2 3 3 3 1 EF-hand domain pair FAM193_C PF15914.5 ORF80878 - 0.011 15.5 0.1 0.016 14.9 0.1 1.4 1 0 0 1 1 1 0 FAM193 family C-terminal IL31 PF15209.6 ORF80878 - 0.016 15.0 0.1 0.02 14.7 0.1 1.4 1 1 0 1 1 1 0 Interleukin 31 EF-hand_10 PF14788.6 ORF80878 - 0.026 14.4 1.1 0.026 14.4 1.1 2.0 2 1 0 2 2 2 0 EF hand EF-hand_11 PF08976.11 ORF80878 - 0.059 14.2 0.1 0.07 14.0 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain Pannexin_like PF12534.8 ORF80863 - 0.74 8.8 3.0 0.76 8.8 3.0 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 DRAT PF07357.11 ORF79541 - 0.041 13.1 0.2 0.043 13.0 0.2 1.1 1 0 0 1 1 1 0 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) FdsD PF11390.8 ORF79541 - 0.073 13.4 0.1 0.11 12.9 0.1 1.3 1 0 0 1 1 1 0 NADH-dependant formate dehydrogenase delta subunit FdsD Pre-PUA PF17832.1 ORF78979 - 0.073 13.8 1.3 0.11 13.2 1.3 1.3 1 0 0 1 1 1 0 Pre-PUA-like domain SPC12 PF06645.13 ORF78465 - 5.3 7.2 9.7 32 4.7 9.4 2.1 1 1 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) RRM_1 PF00076.22 ORF78422 - 1.7e-08 34.2 0.1 3.1e-08 33.3 0.1 1.5 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF78422 - 0.0015 18.5 0.2 0.002 18.2 0.2 1.1 1 0 0 1 1 1 1 RNA binding motif RRM_occluded PF16842.5 ORF78422 - 0.0028 17.5 0.1 0.0051 16.7 0.1 1.5 1 1 0 1 1 1 1 Occluded RNA-recognition motif RRM_7 PF16367.5 ORF78422 - 0.003 17.6 0.0 0.004 17.2 0.0 1.4 1 1 0 1 1 1 1 RNA recognition motif PLAC PF08686.11 ORF7735 - 0.14 13.0 1.2 0.54 11.1 1.3 1.9 1 1 1 2 2 2 0 PLAC (protease and lacunin) domain Secretogranin_V PF05281.11 ORF76589 - 0.13 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Neuroendocrine protein 7B2 precursor (Secretogranin V) LptF_LptG PF03739.14 ORF76278 - 0.32 9.8 9.9 0.4 9.5 9.9 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG DUF2768 PF10966.8 ORF76278 - 3.7 8.1 13.7 0.12 12.8 5.5 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF2768) ThrE PF06738.12 ORF76278 - 8.6 5.6 10.8 9.3 5.5 10.8 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF2070 PF09843.9 ORF75684 - 1.8 6.8 5.8 2 6.6 5.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Strabismus PF06638.11 ORF75684 - 3.9 6.0 5.7 5 5.6 5.7 1.1 1 0 0 1 1 1 0 Strabismus protein NYD-SP28 PF14772.6 ORF75284 - 0.0077 16.3 1.9 0.0077 16.3 1.9 1.8 2 0 0 2 2 2 1 Sperm tail IQ PF00612.27 ORF75284 - 0.048 13.5 2.0 0.048 13.5 2.0 1.7 2 0 0 2 2 2 0 IQ calmodulin-binding motif FYVE_2 PF02318.16 ORF74180 - 0.085 13.1 3.2 0.093 13.0 3.2 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger AC_N PF16214.5 ORF73775 - 0.16 11.1 1.8 0.16 11.1 1.8 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region QCR10 PF09796.9 ORF73711 - 0.089 12.9 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) Baculo_11_kDa PF06143.11 ORF73711 - 0.44 10.2 9.4 0.61 9.7 4.0 2.0 2 0 0 2 2 2 0 Baculovirus 11 kDa family DUF2102 PF09875.9 ORF73458 - 0.22 11.2 0.0 0.28 10.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) DUF1263 PF06882.12 ORF7345 - 0.073 13.1 0.8 0.11 12.6 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1263) Novirhabdo_Nv PF05554.11 ORF73234 - 0.08 12.7 0.0 0.11 12.3 0.0 1.3 1 1 0 1 1 1 0 Viral hemorrhagic septicemia virus non-virion protein FXa_inhibition PF14670.6 ORF73155 - 0.0054 17.0 0.3 0.01 16.1 0.3 1.4 1 0 0 1 1 1 1 Coagulation Factor Xa inhibitory site AKAP95 PF04988.12 ORF73155 - 0.069 13.4 0.2 0.073 13.3 0.2 1.1 1 0 0 1 1 1 0 A-kinase anchoring protein 95 (AKAP95) Ax_dynein_light PF10211.9 ORF72542 - 0.0019 18.2 2.1 0.0021 18.0 2.1 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain DUF1187 PF06688.11 ORF72542 - 0.003 17.8 1.1 0.0055 17.0 1.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1187) ZapB PF06005.12 ORF72542 - 0.011 16.2 3.1 0.015 15.7 3.1 1.2 1 0 0 1 1 1 0 Cell division protein ZapB Cep57_CLD PF14073.6 ORF72542 - 0.018 15.0 2.7 0.022 14.8 2.7 1.1 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 GAS PF13851.6 ORF72542 - 0.024 14.0 2.9 0.027 13.8 2.9 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Paramecium_SA PF01508.16 ORF71755 - 0.053 14.0 0.3 0.088 13.2 0.3 1.3 1 0 0 1 1 1 0 Paramecium surface antigen domain DUF4083 PF13314.6 ORF71390 - 0.22 11.5 0.8 0.45 10.5 0.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Apq12 PF12716.7 ORF71349 - 0.77 9.7 5.8 0.13 12.3 2.1 1.6 2 0 0 2 2 2 0 Nuclear pore assembly and biogenesis DUF3357 PF11837.8 ORF70949 - 0.065 13.7 0.0 0.072 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) ETRAMP PF09716.10 ORF70845 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Como_SCP PF02248.16 ORF70760 - 0.0071 15.9 0.0 0.009 15.6 0.0 1.2 1 0 0 1 1 1 1 Small coat protein Med16 PF11635.8 ORF70730 - 0.24 9.3 2.7 0.24 9.3 2.7 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 Paf1 PF03985.13 ORF70662 - 0.04 12.9 0.0 0.047 12.7 0.0 1.0 1 0 0 1 1 1 0 Paf1 QCR10 PF09796.9 ORF70359 - 0.089 12.9 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) Baculo_11_kDa PF06143.11 ORF70359 - 0.44 10.2 9.4 0.61 9.7 4.0 2.0 2 0 0 2 2 2 0 Baculovirus 11 kDa family FRB_dom PF08771.11 ORF69672 - 0.0034 17.7 2.5 0.004 17.5 2.5 1.0 1 0 0 1 1 1 1 FKBP12-rapamycin binding domain DUF4200 PF13863.6 ORF69672 - 0.036 14.5 8.3 0.073 13.5 8.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) GrpE PF01025.19 ORF69672 - 0.037 13.7 7.6 0.043 13.5 7.6 1.0 1 0 0 1 1 1 0 GrpE DUF5600 PF18150.1 ORF69672 - 0.039 14.5 1.5 0.07 13.7 1.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF5600) YihI PF04220.12 ORF69672 - 0.043 13.5 3.5 0.051 13.3 3.5 1.2 1 0 0 1 1 1 0 Der GTPase activator (YihI) DUF4349 PF14257.6 ORF69672 - 0.049 13.1 1.5 0.064 12.7 1.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4349) HAMP PF00672.25 ORF69672 - 0.053 13.9 0.1 0.11 12.9 0.0 1.6 2 0 0 2 2 2 0 HAMP domain Atg14 PF10186.9 ORF69672 - 0.064 12.3 2.6 0.08 12.0 2.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 APG6_N PF17675.1 ORF69672 - 0.077 13.5 3.1 0.12 12.9 3.1 1.4 1 1 0 1 1 1 0 Apg6 coiled-coil region THOC7 PF05615.13 ORF69672 - 0.1 12.9 0.6 0.1 12.9 0.6 2.1 1 1 1 2 2 2 0 Tho complex subunit 7 DUF4446 PF14584.6 ORF69672 - 0.16 12.0 7.7 0.15 12.1 4.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF16 PF01519.16 ORF69672 - 0.2 12.1 11.9 0.036 14.5 5.5 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 PCRF PF03462.18 ORF69672 - 0.29 11.0 4.3 0.18 11.6 1.9 1.5 1 1 0 1 1 1 0 PCRF domain Glu-tRNAGln PF02686.15 ORF69672 - 0.55 10.6 4.6 0.37 11.1 1.0 2.2 2 1 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit CHIP_TPR_N PF18391.1 ORF69672 - 0.57 11.0 6.6 1 10.2 3.2 2.1 1 1 1 2 2 2 0 CHIP N-terminal tetratricopeptide repeat domain DUF2802 PF10975.8 ORF69672 - 0.88 9.7 5.2 3.7 7.8 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2802) DUF948 PF06103.11 ORF69672 - 2.4 8.4 7.4 34 4.8 7.4 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) zf-C4H2 PF10146.9 ORF69672 - 3.7 7.8 8.6 5.7 7.2 8.6 1.4 1 1 0 1 1 1 0 Zinc finger-containing protein SlyX PF04102.12 ORF69672 - 4.6 7.9 9.9 5.6 7.7 0.2 2.9 1 1 2 3 3 3 0 SlyX Insulin PF00049.18 ORF6884 - 0.087 13.8 2.6 0.17 12.9 2.7 1.4 1 1 0 1 1 1 0 Insulin/IGF/Relaxin family zf-RING-like PF08746.11 ORF68710 - 0.14 12.5 1.0 0.14 12.5 1.0 2.0 2 0 0 2 2 2 0 RING-like domain YafQ_toxin PF15738.5 ORF68567 - 0.58 10.5 8.6 0.81 10.1 7.8 1.8 1 1 0 1 1 1 0 Bacterial toxin of type II toxin-antitoxin system, YafQ Astro_capsid_N PF03115.14 ORF68567 - 1.7 7.2 7.1 1.7 7.2 7.1 1.0 1 0 0 1 1 1 0 Astrovirus capsid protein precursor Med4 PF10018.9 ORF68567 - 6.7 6.3 11.0 7.5 6.2 11.0 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 SipA_VBS PF17985.1 ORF68378 - 0.17 11.9 0.6 9.2 6.4 0.0 2.3 2 0 0 2 2 2 0 SipA vinculin binding site C166 PF17615.2 ORF67179 - 0.17 12.1 0.3 0.21 11.7 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function Spore_III_AB PF09548.10 ORF66942 - 0.04 14.0 0.6 0.12 12.4 0.1 1.8 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) MRP-63 PF14978.6 ORF66942 - 0.62 10.7 4.1 0.88 10.2 4.1 1.3 1 1 0 1 1 1 0 Mitochondrial ribosome protein 63 Aldedh PF00171.22 ORF66942 - 3.3 6.1 6.4 3.5 6.0 6.4 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family LZ_Tnp_IS481 PF13011.6 ORF66875 - 0.042 14.4 0.3 0.055 14.0 0.3 1.2 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 Leader_Thr PF08254.11 ORF66187 - 1.2 8.9 6.0 3.5 7.5 6.0 1.8 1 0 0 1 1 1 0 Threonine leader peptide Plasmodium_HRP PF05403.11 ORF66088 - 0.003 17.4 3.8 0.0035 17.2 3.8 1.0 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) hnRNP_Q_AcD PF18360.1 ORF66088 - 0.11 12.5 6.4 2 8.5 0.7 2.3 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain DUF4375 PF14300.6 ORF66088 - 9.5 6.5 8.0 36 4.6 0.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) GldH_lipo PF14109.6 ORF65061 - 0.034 14.9 0.1 0.036 14.8 0.1 1.2 1 0 0 1 1 1 0 GldH lipoprotein Ribosomal_L18 PF17135.4 ORF65061 - 0.15 11.5 3.9 0.17 11.3 3.9 1.1 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e CCDC142 PF14923.6 ORF64997 - 0.0099 14.7 2.5 0.01 14.6 2.5 1.1 1 0 0 1 1 1 1 Coiled-coil protein 142 BSP_II PF05432.11 ORF64873 - 1.3 8.7 7.2 1.5 8.5 7.2 1.0 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) AgrB PF04647.15 ORF64873 - 4 6.7 5.4 0.77 9.0 1.4 1.7 2 0 0 2 2 2 0 Accessory gene regulator B ORC4_C PF14629.6 ORF64221 - 0.023 14.1 0.1 0.023 14.1 0.1 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus MOSP_N PF02707.16 ORF62911 - 0.028 14.2 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Major Outer Sheath Protein N-terminal region DUF5486 PF17588.2 ORF62753 - 0.089 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5486) DUF454 PF04304.13 ORF60515 - 0.012 15.6 1.4 0.016 15.2 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF454) Crystall_3 PF08964.10 ORF5987 - 0.22 11.7 0.0 0.29 11.3 0.0 1.2 1 0 0 1 1 1 0 Beta/Gamma crystallin DSS1_SEM1 PF05160.13 ORF58882 - 6e-14 51.9 12.5 9.7e-14 51.2 12.5 1.3 1 0 0 1 1 1 1 DSS1/SEM1 family SH3_14 PF18343.1 ORF58882 - 0.052 13.6 0.5 0.061 13.4 0.5 1.1 1 0 0 1 1 1 0 Dda helicase SH3 domain BHD_2 PF10404.9 ORF57366 - 1.5 9.8 8.3 7.4e+02 1.2 8.3 2.6 1 1 0 1 1 1 0 Rad4 beta-hairpin domain 2 GldH_lipo PF14109.6 ORF56712 - 0.034 14.9 0.1 0.036 14.8 0.1 1.2 1 0 0 1 1 1 0 GldH lipoprotein Ribosomal_L18 PF17135.4 ORF56712 - 0.15 11.5 3.9 0.17 11.3 3.9 1.1 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e MASE1 PF05231.14 ORF55918 - 8.8 5.4 7.0 1.4 8.0 2.4 1.7 2 0 0 2 2 2 0 MASE1 Bystin PF05291.11 ORF55744 - 0.08 12.2 0.0 0.089 12.1 0.0 1.1 1 0 0 1 1 1 0 Bystin DUF485 PF04341.12 ORF5538 - 0.16 11.9 2.7 0.21 11.6 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF2254 PF10011.9 ORF5538 - 0.31 9.8 1.5 0.36 9.6 1.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF4186 PF13811.6 ORF5511 - 0.19 11.7 0.6 0.25 11.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) SHIPPO-rpt PF07004.12 ORF54884 - 0.12 13.3 1.5 0.14 13.1 0.3 1.8 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat DUF2537 PF10801.8 ORF54766 - 0.17 12.1 3.2 2 8.7 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2537) TAL_FSA PF00923.19 ORF54700 - 8.8e-20 71.2 0.0 9.7e-20 71.1 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase Ank_4 PF13637.6 ORF54261 - 1.5e-05 25.4 0.1 2e-05 25.0 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF54261 - 6.4e-05 23.1 0.0 0.00011 22.5 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF54261 - 0.0083 16.7 0.0 0.014 15.9 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF54261 - 0.093 13.3 0.0 0.29 11.8 0.0 1.9 1 0 0 1 1 1 0 Ankyrin repeat MOSP_N PF02707.16 ORF54229 - 0.028 14.2 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Major Outer Sheath Protein N-terminal region Herpes_LMP1 PF05297.11 ORF54110 - 5.1 6.2 9.1 6.2 5.9 9.1 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Serum_albumin PF00273.20 ORF53904 - 0.015 15.0 0.6 0.017 14.9 0.6 1.1 1 0 0 1 1 1 0 Serum albumin family SRP14 PF02290.15 ORF53467 - 0.14 12.6 0.1 0.18 12.2 0.1 1.2 1 0 0 1 1 1 0 Signal recognition particle 14kD protein Gemini_AL1_M PF08283.11 ORF53316 - 0.034 14.2 1.5 0.039 14.0 1.5 1.1 1 0 0 1 1 1 0 Geminivirus rep protein central domain DUF1435 PF07256.12 ORF53177 - 0.035 14.2 1.3 0.035 14.2 1.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1435) DUF4829 PF16111.5 ORF52080 - 0.034 14.9 1.9 0.045 14.5 1.9 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4829) FAM199X PF15814.5 ORF50798 - 3.9 6.4 8.3 4.5 6.3 8.3 1.1 1 0 0 1 1 1 0 Protein family FAM199X PPR_2 PF13041.6 ORF50543 - 1.2e-09 38.2 0.0 2.3e-07 30.9 0.0 1.7 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF50543 - 5.6e-05 23.1 0.0 0.0053 16.8 0.0 1.7 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF50543 - 0.018 15.3 0.0 0.038 14.2 0.0 1.6 1 0 0 1 1 1 0 PPR repeat DUF2866 PF11065.8 ORF50534 - 0.026 14.5 0.3 0.23 11.5 0.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2866) DUF4186 PF13811.6 ORF50217 - 0.19 11.7 0.6 0.25 11.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) POM121 PF15229.6 ORF4977 - 0.67 9.5 8.2 0.76 9.4 8.2 1.1 1 0 0 1 1 1 0 POM121 family KNTase_C PF07827.11 ORF49504 - 0.073 12.9 0.0 0.088 12.6 0.0 1.1 1 0 0 1 1 1 0 KNTase C-terminal domain DUF4750 PF15938.5 ORF49499 - 0.08 12.6 5.1 0.24 11.1 1.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) Osw5 PF17062.5 ORF49459 - 3.1 8.0 9.1 0.45 10.6 4.5 2.0 2 1 0 2 2 2 0 Outer spore wall 5 Arch_fla_DE PF04659.13 ORF49079 - 0.014 15.2 0.2 0.018 14.9 0.2 1.1 1 0 0 1 1 1 0 Archaeal flagella protein MIEAP PF16026.5 ORF48054 - 0.14 12.3 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Mitochondria-eating protein Nkap_C PF06047.11 ORF48054 - 0.15 12.2 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 NF-kappa-B-activating protein C-terminal domain Cupin_3 PF05899.12 ORF47167 - 1.8e-20 72.4 2.2 2.1e-20 72.2 2.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_2 PF07883.11 ORF47167 - 5.5e-05 22.8 0.0 7.8e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Cupin domain EutQ PF06249.12 ORF47167 - 0.0022 17.7 0.0 0.0027 17.5 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ Cupin_1 PF00190.22 ORF47167 - 0.17 11.5 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 Cupin DUF1442 PF07279.11 ORF46491 - 0.02 14.2 0.1 0.022 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1442) XRN_M PF17846.1 ORF46328 - 0.0087 15.1 0.4 0.0087 15.1 0.4 1.1 1 0 0 1 1 1 1 Xrn1 helical domain TssN PF17555.2 ORF46328 - 0.35 10.2 6.1 0.46 9.8 6.1 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF5549 PF17703.1 ORF44225 - 0.032 13.9 0.1 0.038 13.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5549) TMIE PF16038.5 ORF44225 - 0.16 11.8 0.9 0.22 11.4 0.9 1.3 1 0 0 1 1 1 0 TMIE protein Cementoin PF10511.9 ORF44082 - 0.024 14.9 3.7 0.048 13.9 2.3 2.3 1 1 1 2 2 2 0 Trappin protein transglutaminase binding domain Tmemb_170 PF10190.9 ORF42054 - 0.022 15.1 0.4 0.029 14.7 0.4 1.1 1 0 0 1 1 1 0 Putative transmembrane protein 170 DUF4462 PF14692.6 ORF41973 - 0.039 13.4 0.4 0.074 12.5 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) Ribosomal_L37ae PF01780.19 ORF41973 - 0.18 11.9 0.6 0.29 11.2 0.6 1.3 1 0 0 1 1 1 0 Ribosomal L37ae protein family PB1 PF00564.24 ORF40993 - 0.11 12.5 0.1 0.45 10.5 0.0 1.9 1 1 1 2 2 2 0 PB1 domain PB1 PF00564.24 ORF40978 - 0.11 12.5 0.1 0.45 10.5 0.0 1.9 1 1 1 2 2 2 0 PB1 domain Cu2_monooxygen PF01082.20 ORF39867 - 0.056 13.7 1.0 0.068 13.4 1.0 1.1 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain NST1 PF13945.6 ORF39654 - 0.023 14.8 2.4 0.037 14.1 2.4 1.3 1 0 0 1 1 1 0 Salt tolerance down-regulator Aa_trans PF01490.18 ORF38574 - 8.7e-12 44.4 7.4 1.1e-11 44.2 7.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein YlaH PF14036.6 ORF38574 - 0.014 15.7 0.7 0.014 15.7 0.7 2.0 2 0 0 2 2 2 0 YlaH-like protein DUF4719 PF15843.5 ORF38546 - 7.4 6.6 10.3 21 5.1 10.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4719) Phtf-FEM1B_bdg PF12129.8 ORF385 - 0.22 11.3 3.0 0.26 11.1 3.0 1.2 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor zf-rbx1 PF12678.7 ORF37557 - 2.1e-25 88.8 12.3 2.8e-25 88.4 12.3 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF37557 - 1.8e-17 63.2 10.2 2.1e-17 62.9 10.2 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_2 PF13639.6 ORF37557 - 5.4e-06 26.6 15.0 0.00024 21.4 15.0 2.3 1 1 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF37557 - 2.8e-05 23.8 2.3 2.8e-05 23.8 2.3 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF37557 - 0.00064 19.6 11.7 0.011 15.6 11.7 2.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF37557 - 0.0059 16.3 3.1 0.0059 16.3 3.1 2.4 2 1 0 2 2 2 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF37557 - 0.045 13.4 4.7 0.045 13.4 4.7 2.2 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF37557 - 0.16 12.2 9.4 0.46 10.7 9.5 1.7 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_UBOX PF13445.6 ORF37557 - 0.32 11.1 7.9 1.5 8.9 7.9 2.1 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF37557 - 0.47 10.4 11.0 3.8 7.5 4.9 2.6 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF37557 - 2.5 8.1 11.1 12 5.9 11.2 2.2 1 1 0 1 1 1 0 zinc-RING finger domain Olduvai PF06758.13 ORF3731 - 0.057 13.7 0.2 0.087 13.1 0.2 1.3 1 0 0 1 1 1 0 Olduvai domain DUF5462 PF17547.2 ORF36430 - 0.062 12.7 0.1 0.067 12.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5462) RskA PF10099.9 ORF35453 - 0.018 15.3 4.7 0.02 15.2 4.7 1.2 1 0 0 1 1 1 0 Anti-sigma-K factor rskA Cystatin PF00031.21 ORF35103 - 8.8e-09 35.5 0.0 9.4e-09 35.4 0.0 1.2 1 0 0 1 1 1 1 Cystatin domain Calpain_III PF01067.22 ORF35080 - 2.3e-07 31.1 0.5 2.8e-07 30.9 0.5 1.1 1 0 0 1 1 1 1 Calpain large subunit, domain III zf-BED PF02892.15 ORF35038 - 0.32 11.0 3.1 8.9 6.4 0.3 2.3 1 1 1 2 2 2 0 BED zinc finger DUF4186 PF13811.6 ORF3501 - 0.19 11.7 0.6 0.25 11.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) DUF2951 PF11166.8 ORF33597 - 0.48 10.7 8.7 0.54 10.5 3.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) ETRAMP PF09716.10 ORF32649 - 0.072 13.2 0.2 0.086 12.9 0.2 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) KIX_2 PF16987.5 ORF31394 - 0.036 14.0 0.1 0.049 13.6 0.1 1.1 1 0 0 1 1 1 0 KIX domain E1_dh PF00676.20 ORF30223 - 0.0054 15.7 0.0 0.0069 15.4 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component QIL1 PF15884.5 ORF30223 - 0.18 12.4 0.3 0.84 10.3 0.1 1.9 1 1 1 2 2 2 0 MICOS complex subunit MIC13, QIL1 Rhodanese_C PF12368.8 ORF2991 - 0.05 14.0 3.2 0.062 13.7 3.2 1.2 1 0 0 1 1 1 0 Rhodanase C-terminal Cu2_monooxygen PF01082.20 ORF29687 - 0.056 13.7 1.0 0.068 13.4 1.0 1.1 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain DUF1853 PF08907.11 ORF2938 - 0.08 12.6 0.9 0.084 12.6 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1853) FtsJ PF01728.19 ORF2893 - 1.6e-23 83.7 0.0 1.8e-23 83.6 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltr_RsmB-F PF01189.17 ORF2893 - 0.077 12.6 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F DivIVA PF05103.13 ORF28353 - 0.00066 19.8 1.8 0.00081 19.5 1.8 1.2 1 0 0 1 1 1 1 DivIVA protein DUF3583 PF12126.8 ORF28353 - 0.0097 15.4 0.3 0.011 15.3 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3583) Malate_synthase PF01274.22 ORF28353 - 0.01 14.1 0.2 0.011 14.0 0.2 1.0 1 0 0 1 1 1 0 Malate synthase KxDL PF10241.9 ORF28353 - 0.055 13.8 1.6 0.08 13.2 0.7 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein DUF4611 PF15387.6 ORF28352 - 0.016 15.5 1.4 0.02 15.1 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) RP-C_C PF11800.8 ORF28352 - 0.38 10.8 3.1 0.41 10.7 3.1 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region DUF4191 PF13829.6 ORF26777 - 0.57 9.5 1.2 0.63 9.3 1.2 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4191) Cu2_monooxygen PF01082.20 ORF26727 - 0.056 13.7 1.0 0.068 13.4 1.0 1.1 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain SapA PF02199.15 ORF26575 - 2.4 8.5 0.1 2.4 8.5 0.1 2.9 3 0 0 3 3 3 0 Saposin A-type domain IFRD PF05004.13 ORF2537 - 0.08 12.0 3.8 0.081 12.0 3.8 1.0 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) Top6b_C PF18000.1 ORF2537 - 0.099 12.8 0.5 0.12 12.5 0.5 1.2 1 0 0 1 1 1 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain SseC PF04888.12 ORF2537 - 2.2 7.8 8.0 1.3 8.5 6.4 1.4 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family His_binding PF02098.16 ORF24583 - 0.073 13.1 2.9 0.083 12.9 2.9 1.1 1 0 0 1 1 1 0 Tick histamine binding protein CYYR1 PF10873.8 ORF24228 - 0.046 14.2 0.1 0.058 13.8 0.1 1.2 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 ETRAMP PF09716.10 ORF24030 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) KH_dom-like PF14714.6 ORF23023 - 0.042 14.2 0.9 0.36 11.2 0.0 2.0 2 0 0 2 2 2 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YWFCY PF14293.6 ORF21842 - 0.031 14.6 0.1 0.031 14.6 0.1 2.6 3 0 0 3 3 3 0 YWFCY protein TRIQK PF15168.6 ORF21842 - 0.12 12.2 0.4 0.33 10.9 0.4 1.8 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family SKG6 PF08693.10 ORF21842 - 9.9 5.7 7.6 0.87 9.1 2.2 2.0 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Robl_LC7 PF03259.17 ORF2072 - 6.4e-13 48.3 0.0 7.6e-13 48.1 0.0 1.0 1 0 0 1 1 1 1 Roadblock/LC7 domain AC_N PF16214.5 ORF19581 - 0.16 11.1 1.8 0.16 11.1 1.8 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Urotensin_II PF02083.15 ORF19320 - 0.14 11.9 9.8 2.9 7.8 0.3 2.7 2 0 0 2 2 2 0 Urotensin II HECT PF00632.25 ORF18930 - 2.8e-18 66.4 0.0 3.2e-18 66.3 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Herpes_UL52 PF03121.15 ORF18930 - 0.021 14.8 0.1 0.062 13.3 0.1 1.9 1 1 1 2 2 2 0 Herpesviridae UL52/UL70 DNA primase TIP49_C PF17856.1 ORF18680 - 0.098 12.8 0.4 0.15 12.2 0.4 1.3 1 0 0 1 1 1 0 TIP49 AAA-lid domain YozE_SAM_like PF06855.12 ORF18680 - 0.14 12.3 0.1 0.23 11.6 0.1 1.4 1 0 0 1 1 1 0 YozE SAM-like fold DUF4191 PF13829.6 ORF18457 - 0.57 9.5 1.2 0.63 9.3 1.2 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4191) Cut8 PF08559.10 ORF17590 - 0.00063 19.4 0.4 0.00063 19.4 0.4 1.1 1 0 0 1 1 1 1 Cut8, nuclear proteasome tether protein EF-hand_2 PF09068.11 ORF17590 - 0.038 14.1 0.1 0.045 13.9 0.1 1.1 1 0 0 1 1 1 0 EF hand ThiG PF05690.14 ORF17590 - 0.16 11.3 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG XK-related PF09815.9 ORF17225 - 0.025 13.7 0.1 0.031 13.3 0.1 1.1 1 0 0 1 1 1 0 XK-related protein BatD PF13584.6 ORF17225 - 0.041 12.7 0.1 0.046 12.5 0.1 1.0 1 0 0 1 1 1 0 Oxygen tolerance WBP-1 PF11669.8 ORF17225 - 0.058 14.0 0.4 0.07 13.8 0.4 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 GT87 PF09594.10 ORF17225 - 0.13 12.0 0.0 0.14 11.9 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 87 DUF4381 PF14316.6 ORF17225 - 0.15 12.3 0.1 0.21 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Keratin_matx PF04579.12 ORF17187 - 0.06 13.7 2.4 0.51 10.7 1.4 2.3 1 1 1 2 2 2 0 Keratin, high-sulphur matrix protein SAND PF01342.21 ORF16345 - 0.014 15.0 5.8 0.82 9.4 0.2 2.3 2 1 0 2 2 2 0 SAND domain DUF4477 PF14780.6 ORF15697 - 0.52 9.9 6.3 4.3 6.9 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4477) DUF2208 PF09973.9 ORF152148 - 0.007 16.0 0.7 0.0078 15.9 0.7 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) CCDC-167 PF15188.6 ORF152148 - 0.021 15.2 1.2 0.026 14.9 1.2 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF722 PF05263.11 ORF152148 - 0.028 14.6 1.4 0.031 14.5 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF722) DUF4337 PF14235.6 ORF152148 - 0.63 10.1 3.3 0.76 9.9 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Siva PF05458.12 ORF151748 - 2.9 7.6 9.1 4 7.1 9.1 1.2 1 0 0 1 1 1 0 Cd27 binding protein (Siva) DUF1294 PF06961.13 ORF151573 - 0.07 13.4 0.0 0.25 11.6 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1294) KIX_2 PF16987.5 ORF1515 - 0.036 14.0 0.1 0.049 13.6 0.1 1.1 1 0 0 1 1 1 0 KIX domain His_binding PF02098.16 ORF150818 - 0.073 13.1 2.9 0.083 12.9 2.9 1.1 1 0 0 1 1 1 0 Tick histamine binding protein Baculo_gp64 PF03273.13 ORF15071 - 0.018 13.9 0.3 0.02 13.7 0.3 1.0 1 0 0 1 1 1 0 Baculovirus gp64 envelope glycoprotein family DAN PF03045.15 ORF150676 - 0.035 14.2 0.2 0.038 14.0 0.2 1.1 1 0 0 1 1 1 0 DAN domain KIAA1430 PF13879.6 ORF150345 - 1.1e-10 42.2 7.9 1.1e-10 42.2 7.9 1.7 2 0 0 2 2 2 1 KIAA1430 homologue GPP34 PF05719.11 ORF150345 - 0.066 13.2 0.1 0.07 13.2 0.1 1.1 1 0 0 1 1 1 0 Golgi phosphoprotein 3 (GPP34) Orthopox_A36R PF05950.11 ORF150345 - 0.21 11.7 2.2 0.5 10.5 0.2 1.9 1 1 1 2 2 2 0 Orthopoxvirus A36R protein Cu2_monooxygen PF01082.20 ORF149543 - 0.056 13.7 1.0 0.068 13.4 1.0 1.1 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain ACP PF06857.11 ORF14851 - 0.15 12.3 0.0 0.2 11.9 0.0 1.2 1 0 0 1 1 1 0 Malonate decarboxylase delta subunit (MdcD) DZR PF12773.7 ORF148451 - 0.047 13.7 5.0 0.053 13.6 4.1 1.8 1 1 0 1 1 1 0 Double zinc ribbon AC_N PF16214.5 ORF148398 - 0.16 11.1 1.8 0.16 11.1 1.8 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region UL16 PF17622.2 ORF147428 - 0.073 12.7 0.0 0.084 12.5 0.0 1.1 1 0 0 1 1 1 0 Viral unique long protein 16 Ribosomal_L19 PF01245.20 ORF147235 - 0.015 15.3 0.1 2.2 8.3 0.0 2.0 1 1 1 2 2 2 0 Ribosomal protein L19 Paramecium_SA PF01508.16 ORF146926 - 0.053 14.0 0.3 0.088 13.2 0.3 1.3 1 0 0 1 1 1 0 Paramecium surface antigen domain ELYS-bb PF16687.5 ORF146371 - 0.026 13.2 0.1 0.029 13.0 0.1 1.0 1 0 0 1 1 1 0 beta-propeller of ELYS nucleoporin NosL PF05573.12 ORF14596 - 0.033 14.5 0.1 0.037 14.4 0.1 1.3 1 0 0 1 1 1 0 NosL ETRAMP PF09716.10 ORF145464 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) LisH PF08513.11 ORF145388 - 1.2e-10 41.0 0.2 2e-10 40.3 0.2 1.4 1 0 0 1 1 1 1 LisH Connexin PF00029.19 ORF145371 - 0.23 11.2 5.3 0.25 11.1 5.3 1.0 1 0 0 1 1 1 0 Connexin FTCD_C PF04961.12 ORF145371 - 0.64 9.8 3.5 0.73 9.6 3.5 1.2 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase CDC45 PF02724.14 ORF145371 - 0.71 8.1 8.9 0.7 8.1 8.9 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF2828 PF11443.8 ORF145371 - 0.73 7.8 7.3 0.8 7.7 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) EOS1 PF12326.8 ORF145371 - 0.77 9.7 2.9 1 9.3 2.9 1.2 1 0 0 1 1 1 0 N-glycosylation protein betaPIX_CC PF16523.5 ORF145371 - 0.92 9.4 21.1 1 9.2 11.9 2.1 1 1 1 2 2 2 0 betaPIX coiled coil TMPIT PF07851.13 ORF145371 - 3.4 6.8 6.5 3.8 6.7 6.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein Sec62 PF03839.16 ORF145371 - 5.6 6.4 8.1 6.6 6.2 8.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 DUF505 PF04458.12 ORF144719 - 0.13 10.6 0.0 0.14 10.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) PsbY PF06298.11 ORF1443 - 1.2e-07 31.5 6.4 1.2e-07 31.5 6.4 1.7 2 0 0 2 2 2 1 Photosystem II protein Y (PsbY) DUF2568 PF10823.8 ORF1443 - 0.0089 16.3 3.2 3.6 7.9 0.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF2568) Keratin_matx PF04579.12 ORF144298 - 0.06 13.7 2.4 0.51 10.7 1.4 2.3 1 1 1 2 2 2 0 Keratin, high-sulphur matrix protein PrgI PF12666.7 ORF142932 - 0.09 13.5 0.7 0.13 13.0 0.7 1.3 1 0 0 1 1 1 0 PrgI family protein EB PF01683.18 ORF141917 - 0.37 11.1 4.9 0.75 10.1 4.9 1.6 1 1 0 1 1 1 0 EB module ETRAMP PF09716.10 ORF141163 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Rho_RNA_bind PF07497.12 ORF139298 - 0.025 14.5 0.0 0.033 14.0 0.0 1.3 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain DUF2200 PF09966.9 ORF139298 - 0.038 14.1 0.1 0.063 13.4 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2200) Ras PF00071.22 ORF138973 - 2e-11 43.7 0.0 2.3e-11 43.5 0.0 1.1 1 0 0 1 1 1 1 Ras family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks282.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks282.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks282.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks282.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Rad60-SLD PF11976.8 ORF138435 - 1.7e-21 75.8 0.3 2.3e-21 75.4 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 ORF138435 - 1.3e-11 44.1 0.3 1.8e-11 43.6 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin family SRP9-21 PF05486.12 ORF138435 - 0.014 15.8 0.5 0.019 15.3 0.2 1.4 1 1 0 1 1 1 0 Signal recognition particle 9 kDa protein (SRP9) Beta_protein PF14350.6 ORF138435 - 0.026 13.9 0.1 0.029 13.8 0.1 1.0 1 0 0 1 1 1 0 Beta protein PB1 PF00564.24 ORF138435 - 0.12 12.4 0.2 0.23 11.4 0.2 1.6 1 1 0 1 1 1 0 PB1 domain zf-A20 PF01754.16 ORF138013 - 2.4e-06 27.4 2.9 2.4e-06 27.4 2.9 2.0 2 0 0 2 2 2 1 A20-like zinc finger tRNA-synt_1g PF09334.11 ORF138013 - 0.022 13.5 1.2 0.026 13.3 1.2 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf_C2H2_10 PF18414.1 ORF138013 - 4.5 6.9 5.6 11 5.7 0.5 2.3 2 0 0 2 2 2 0 C2H2 type zinc-finger DUF1883 PF08980.10 ORF137571 - 0.029 14.3 0.2 0.036 14.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1883) DUF1435 PF07256.12 ORF137396 - 0.035 14.2 1.3 0.035 14.2 1.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1435) Ras PF00071.22 ORF137261 - 1.5e-06 27.9 0.0 1.7e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Ras family ACP PF06857.11 ORF137235 - 0.15 12.3 0.0 0.2 11.9 0.0 1.2 1 0 0 1 1 1 0 Malonate decarboxylase delta subunit (MdcD) Cu2_monooxygen PF01082.20 ORF137098 - 0.056 13.7 1.0 0.068 13.4 1.0 1.1 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain SPC12 PF06645.13 ORF136869 - 5.3 7.2 9.7 32 4.7 9.4 2.1 1 1 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Grg1 PF11034.8 ORF136744 - 0.055 13.7 1.3 0.11 12.7 0.2 1.9 2 0 0 2 2 2 0 Glucose-repressible protein Grg1 CDT1_C PF16679.5 ORF136744 - 0.15 12.5 0.0 0.18 12.3 0.0 1.3 1 1 0 1 1 1 0 DNA replication factor Cdt1 C-terminal domain DUF2228 PF10228.9 ORF136649 - 0.19 11.4 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2228) G-gamma PF00631.22 ORF135668 - 0.14 12.2 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 GGL domain Yippee-Mis18 PF03226.14 ORF134892 - 8.6e-08 32.3 3.6 1.1e-07 32.0 3.6 1.1 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly RIG-I_C-RD PF11648.8 ORF134892 - 0.013 15.8 2.0 0.018 15.3 2.0 1.2 1 0 0 1 1 1 0 C-terminal domain of RIG-I DUF2753 PF10952.8 ORF134892 - 0.049 13.8 0.0 0.081 13.1 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2753) Med16 PF11635.8 ORF134546 - 0.11 10.5 1.4 0.096 10.6 1.4 1.1 1 0 0 1 1 1 0 Mediator complex subunit 16 DDE_Tnp_1_6 PF13751.6 ORF13443 - 0.097 12.9 3.6 0.11 12.7 3.6 1.2 1 0 0 1 1 1 0 Transposase DDE domain Peptidase_A22B PF04258.13 ORF133338 - 0.017 14.7 1.2 0.018 14.6 1.2 1.0 1 0 0 1 1 1 0 Signal peptide peptidase PGI PF00342.19 ORF133338 - 1 7.9 7.2 1.2 7.6 7.2 1.0 1 0 0 1 1 1 0 Phosphoglucose isomerase MIP PF00230.20 ORF132955 - 5.1e-13 49.3 0.8 5.8e-13 49.1 0.8 1.0 1 0 0 1 1 1 1 Major intrinsic protein Zip PF02535.22 ORF132598 - 1.2 8.3 7.7 1.6 7.9 7.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Paralemmin PF03285.15 ORF13252 - 0.58 9.7 4.2 0.65 9.5 4.2 1.1 1 0 0 1 1 1 0 Paralemmin SAND PF01342.21 ORF132031 - 0.014 15.0 5.8 0.82 9.4 0.2 2.3 2 1 0 2 2 2 0 SAND domain HEAT_PBS PF03130.16 ORF131745 - 0.00055 20.4 0.1 0.13 13.0 0.0 2.6 3 0 0 3 3 3 2 PBS lyase HEAT-like repeat ICAM_N PF03921.14 ORF131235 - 0.14 11.8 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain TetR_C_36 PF18598.1 ORF130368 - 0.085 12.8 0.1 0.1 12.6 0.1 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain PetG PF02529.15 ORF129680 - 0.082 12.8 0.8 0.14 12.0 0.8 1.4 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit 5 PRR20 PF15708.5 ORF127415 - 0.31 10.9 11.0 0.36 10.7 11.0 1.0 1 0 0 1 1 1 0 Proline-rich protein family 20 ETC_C1_NDUFA4 PF04800.12 ORF127370 - 0.028 14.7 0.1 0.042 14.1 0.1 1.3 1 0 0 1 1 1 0 ETC complex I subunit conserved region TMEM239 PF15841.5 ORF126726 - 8.3 6.3 10.0 10 6.0 10.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family DUF2537 PF10801.8 ORF125815 - 0.17 12.1 3.2 2 8.7 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2537) Axin_b-cat_bind PF08833.10 ORF125248 - 0.13 12.4 0.1 0.22 11.7 0.1 1.4 1 0 0 1 1 1 0 Axin beta-catenin binding domain Adeno_E1A PF02703.14 ORF12504 - 0.04 13.5 0.1 0.04 13.5 0.1 1.2 1 0 0 1 1 1 0 Early E1A protein Glycoprotein PF03409.15 ORF124441 - 9.8 4.9 11.4 10 4.9 11.4 1.1 1 0 0 1 1 1 0 Transmembrane glycoprotein 120_Rick_ant PF12574.8 ORF123010 - 0.027 13.7 0.1 0.029 13.6 0.1 1.1 1 0 0 1 1 1 0 120 KDa Rickettsia surface antigen DUF4116 PF13475.6 ORF1227 - 0.23 11.2 5.4 0.43 10.4 5.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4116) DAN PF03045.15 ORF122634 - 0.035 14.2 0.2 0.038 14.0 0.2 1.1 1 0 0 1 1 1 0 DAN domain NicO PF03824.16 ORF122626 - 3.8 6.8 6.6 3.4 6.9 6.6 1.1 1 0 0 1 1 1 0 High-affinity nickel-transport protein Cu2_monooxygen PF01082.20 ORF122289 - 0.056 13.7 1.0 0.068 13.4 1.0 1.1 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain Pkinase PF00069.25 ORF120855 - 0.0099 15.3 0.0 0.017 14.5 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain stn_TNFRSF12A PF12191.8 ORF117960 - 0.017 15.3 1.1 0.021 15.1 1.1 1.4 1 1 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain RhoGEF67_u2 PF16614.5 ORF117247 - 0.009 16.1 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 Unstructured region two on RhoGEF 6 and 7 Erythro-docking PF09277.11 ORF116337 - 0.15 12.0 1.2 0.32 10.9 1.2 1.6 1 0 0 1 1 1 0 Erythronolide synthase, docking Adeno_E1A PF02703.14 ORF115304 - 0.13 11.9 3.5 0.14 11.7 3.5 1.0 1 0 0 1 1 1 0 Early E1A protein UPF0515 PF15135.6 ORF115197 - 0.0064 15.9 5.0 0.0067 15.8 5.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein UPF0515 APT PF03440.14 ORF115197 - 0.084 12.8 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Aerolysin/Pertussis toxin (APT) domain BRE PF06113.12 ORF114965 - 0.062 12.1 0.1 0.073 11.9 0.1 1.1 1 0 0 1 1 1 0 Brain and reproductive organ-expressed protein (BRE) DIL PF01843.19 ORF114965 - 0.083 13.2 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 DIL domain DUF1015 PF06245.11 ORF114965 - 0.11 11.3 0.2 0.11 11.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1015) Herpes_LMP1 PF05297.11 ORF114768 - 5.1 6.2 9.1 6.2 5.9 9.1 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Glycoprotein PF03409.15 ORF114692 - 9.8 4.9 11.4 10 4.9 11.4 1.1 1 0 0 1 1 1 0 Transmembrane glycoprotein 120_Rick_ant PF12574.8 ORF114412 - 0.027 13.7 0.1 0.029 13.6 0.1 1.1 1 0 0 1 1 1 0 120 KDa Rickettsia surface antigen INTAP PF16617.5 ORF114235 - 0.029 14.7 2.0 0.038 14.4 2.0 1.3 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region Phage_ASH PF10554.9 ORF113982 - 0.052 13.9 0.1 0.063 13.6 0.1 1.2 1 0 0 1 1 1 0 Ash protein family COX7C PF02935.16 ORF113982 - 0.076 13.3 0.1 1.5 9.1 0.3 2.1 1 1 1 2 2 2 0 Cytochrome c oxidase subunit VIIc MAD PF05557.13 ORF113461 - 0.0041 15.5 4.0 0.0045 15.4 4.0 1.0 1 0 0 1 1 1 1 Mitotic checkpoint protein DUF2115 PF09888.9 ORF113461 - 0.08 13.5 2.0 0.088 13.3 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) DUF1053 PF06327.14 ORF113461 - 0.11 13.0 2.4 0.14 12.7 2.1 1.3 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1053) LRRNT PF01462.18 ORF113420 - 3.7 7.3 11.9 0.33 10.6 5.8 2.3 2 1 0 2 2 2 0 Leucine rich repeat N-terminal domain SpoIISA_toxin PF14171.6 ORF113014 - 0.041 13.6 0.5 0.52 10.0 0.1 1.9 1 1 1 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system Chalcone_2 PF16035.5 ORF112770 - 0.076 12.8 0.4 0.088 12.6 0.4 1.1 1 0 0 1 1 1 0 Chalcone isomerase like stn_TNFRSF12A PF12191.8 ORF112321 - 0.017 15.3 1.1 0.021 15.1 1.1 1.4 1 1 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain ETRAMP PF09716.10 ORF111943 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) CBP_BcsR PF10945.8 ORF111258 - 0.19 11.2 0.0 0.32 10.5 0.0 1.3 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR Exo5 PF09810.9 ORF111187 - 0.029 13.9 0.0 0.03 13.8 0.0 1.0 1 0 0 1 1 1 0 Exonuclease V - a 5' deoxyribonuclease Fve PF09259.11 ORF111187 - 0.16 12.1 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 Fungal immunomodulatory protein Fve ETRAMP PF09716.10 ORF111047 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF4490 PF14892.6 ORF111034 - 4.3e-07 29.9 1.1 8.3e-07 29.0 1.1 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4490) DUF4811 PF16069.5 ORF111034 - 0.024 14.5 0.3 0.031 14.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) Grg1 PF11034.8 ORF110596 - 0.055 13.7 1.3 0.11 12.7 0.2 1.9 2 0 0 2 2 2 0 Glucose-repressible protein Grg1 CDT1_C PF16679.5 ORF110596 - 0.15 12.5 0.0 0.18 12.3 0.0 1.3 1 1 0 1 1 1 0 DNA replication factor Cdt1 C-terminal domain KH_dom-like PF14714.6 ORF109731 - 0.042 14.2 0.9 0.36 11.2 0.0 2.0 2 0 0 2 2 2 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Hepcidin PF06446.12 ORF109540 - 0.044 14.2 0.4 0.071 13.5 0.4 1.4 1 0 0 1 1 1 0 Hepcidin Spec3 PF15795.5 ORF109441 - 5.3e-11 42.9 18.6 2.8e-08 34.2 18.6 2.1 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein TM2 PF05154.16 ORF109441 - 7.8 6.9 12.8 1.9 8.9 6.2 2.1 2 0 0 2 2 2 0 TM2 domain Pneumo_matrix PF03393.16 ORF109294 - 0.047 12.9 0.0 0.047 12.9 0.0 1.1 1 0 0 1 1 1 0 Pneumovirus matrix protein MqsA_antitoxin PF15731.5 ORF107720 - 0.15 12.1 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA MAP65_ASE1 PF03999.12 ORF107103 - 3.8 6.1 7.1 4 6.0 7.1 1.0 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Defensin_int PF17858.1 ORF107103 - 4.3 7.4 13.7 8.3 6.5 5.8 2.7 2 0 0 2 2 2 0 Platypus intermediate defensin-like peptide IMUP PF15761.5 ORF10697 - 0.087 13.5 4.6 0.11 13.3 4.6 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein Ferlin_C PF16165.5 ORF106760 - 0.1 12.5 0.9 0.14 12.1 0.7 1.3 1 1 0 1 1 1 0 Ferlin C-terminus Tub PF01167.18 ORF105483 - 3.8e-18 66.1 0.0 4.2e-18 66.0 0.0 1.0 1 0 0 1 1 1 1 Tub family Njmu-R1 PF15053.6 ORF104555 - 0.044 12.9 1.0 0.05 12.7 1.0 1.0 1 0 0 1 1 1 0 Mjmu-R1-like protein family MraZ PF02381.18 ORF103657 - 0.18 11.8 0.1 0.3 11.1 0.1 1.3 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like HDOD PF08668.12 ORF102524 - 0.078 12.4 0.8 0.095 12.2 0.8 1.2 1 0 0 1 1 1 0 HDOD domain CNP_C_terminal PF17839.1 ORF102389 - 0.009 16.7 0.2 0.011 16.5 0.2 1.2 1 0 0 1 1 1 1 C-terminal domain of cyclic nucleotide phosphodiesterase Calpain_III PF01067.22 ORF102389 - 0.019 15.3 0.2 0.02 15.2 0.2 1.2 1 0 0 1 1 1 0 Calpain large subunit, domain III Cyt_c_ox_IV PF12270.8 ORF102189 - 0.17 12.1 1.8 0.25 11.5 1.8 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV ETRAMP PF09716.10 ORF102169 - 0.063 13.3 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) EGF_2 PF07974.13 ORF101847 - 0.093 13.1 0.3 0.093 13.1 0.3 1.7 2 0 0 2 2 2 0 EGF-like domain SnoaL PF07366.12 ORF101841 - 0.094 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase CooC_C PF15976.5 ORF10162 - 1.4e-23 82.7 0.0 1.7e-23 82.5 0.0 1.1 1 0 0 1 1 1 1 CS1-pili formation C-terminal CarboxypepD_reg PF13620.6 ORF10162 - 5.3e-05 23.4 0.0 7.3e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 ORF10162 - 6.7e-05 22.8 0.0 8.7e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 CarboxypepD_reg-like domain MetallophosN PF16371.5 ORF10162 - 0.0059 16.8 0.0 0.0087 16.3 0.0 1.3 1 0 0 1 1 1 1 N terminal of Calcineurin-like phosphoesterase Pollen_Ole_e_I PF01190.17 ORF10162 - 0.017 15.5 0.0 0.021 15.2 0.0 1.3 1 0 0 1 1 1 0 Pollen proteins Ole e I like AAA_lid_3 PF17862.1 ORF100306 - 1.9e-05 24.3 0.0 3.3e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 AAA+ lid domain cNMP_binding PF00027.29 NODE_59405_length_280_cov_1.306122_g51465_i0forward_frame_1 - 0.032 14.3 0.0 0.05 13.7 0.0 1.4 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain NS3_envE PF02723.14 NODE_59397_length_280_cov_1.567347_g51457_i0forward_frame_1 - 0.017 15.2 8.4 0.017 15.2 8.4 2.2 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E DUF327 PF03885.13 NODE_59394_length_280_cov_1.587755_g51454_i0reverse_frame_1 - 0.075 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF327) Fer2 PF00111.27 NODE_59388_length_280_cov_1.657143_g51448_i0forward_frame_1 - 0.13 12.3 0.2 1.6 8.7 0.0 2.0 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain Herpes_UL69 PF05459.12 NODE_59384_length_280_cov_1.681633_g51444_i0forward_frame_1 - 0.023 14.0 0.1 0.032 13.6 0.1 1.3 1 1 0 1 1 1 0 Herpesvirus transcriptional regulator family HSM3_C PF18794.1 NODE_59373_length_280_cov_1.955102_g51433_i0forward_frame_1 - 0.069 12.7 0.1 0.076 12.6 0.1 1.1 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain zf-CCCH_3 PF15663.5 NODE_59365_length_280_cov_2.110204_g51425_i0reverse_frame_1 - 0.098 12.9 7.8 0.12 12.5 7.8 1.2 1 0 0 1 1 1 0 Zinc-finger containing family BNR_6 PF15899.5 NODE_59365_length_280_cov_2.110204_g51425_i0forward_frame_1 - 0.039 14.0 0.1 0.1 12.7 0.1 1.8 1 0 0 1 1 1 0 BNR-Asp box repeat DUF1425 PF07233.12 NODE_59359_length_280_cov_2.253061_g51419_i0reverse_frame_1 - 1.3e-21 76.3 0.0 1.5e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1425) NusG_II PF07009.11 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_1 - 0.2 11.9 0.4 0.25 11.5 0.4 1.1 1 0 0 1 1 1 0 NusG domain II XFP_N PF09364.10 NODE_59356_length_280_cov_2.310204_g51416_i0reverse_frame_1 - 0.11 11.3 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 XFP N-terminal domain Herp-Cyclin PF09241.10 NODE_59356_length_280_cov_2.310204_g51416_i0reverse_frame_1 - 0.16 12.6 0.0 0.2 12.3 0.0 1.2 1 0 0 1 1 1 0 Herpesviridae viral cyclin NMD3 PF04981.13 NODE_59344_length_280_cov_2.795918_g51404_i0reverse_frame_1 - 0.044 13.2 7.4 0.25 10.8 0.1 2.0 1 1 1 2 2 2 0 NMD3 family DUF2711 PF10924.8 NODE_59344_length_280_cov_2.795918_g51404_i0reverse_frame_1 - 0.079 12.6 0.0 0.091 12.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2711) Tubulin-binding PF00418.19 NODE_59344_length_280_cov_2.795918_g51404_i0reverse_frame_1 - 4 7.6 5.3 25 5.0 0.6 2.3 2 0 0 2 2 2 0 Tau and MAP protein, tubulin-binding repeat Crystall_4 PF17945.1 NODE_59344_length_280_cov_2.795918_g51404_i0forward_frame_1 - 0.011 16.2 0.1 1.5 9.4 0.1 2.1 1 1 1 2 2 2 0 Beta/Gamma crystallin KdgT PF03812.13 NODE_59344_length_280_cov_2.795918_g51404_i0forward_frame_1 - 0.055 12.8 0.3 0.081 12.2 0.3 1.3 1 1 0 1 1 1 0 2-keto-3-deoxygluconate permease DUF728 PF05304.12 NODE_59332_length_280_cov_4.889796_g51392_i0reverse_frame_1 - 0.21 11.4 3.2 0.29 11.0 3.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF728) Chorion_2 PF03964.15 NODE_59332_length_280_cov_4.889796_g51392_i0reverse_frame_1 - 2.3 9.1 13.5 2.5 9.0 13.1 1.3 1 1 0 1 1 1 0 Chorion family 2 ALMT PF11744.8 NODE_59332_length_280_cov_4.889796_g51392_i0reverse_frame_1 - 7 5.4 5.8 7.1 5.3 5.8 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Toxin_8 PF07365.12 NODE_59329_length_280_cov_25.106122_g51389_i0reverse_frame_1 - 0.016 15.4 0.6 0.023 14.8 0.6 1.3 1 0 0 1 1 1 0 Alpha conotoxin precursor DUF5321 PF17254.2 NODE_59320_length_280_cov_43.359184_g51380_i0reverse_frame_1 - 5.5 6.4 13.2 6.6 6.1 10.2 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5321) zinc_ribbon_15 PF17032.5 NODE_59316_length_280_cov_55.036735_g51376_i0reverse_frame_1 - 0.0055 17.4 6.4 0.0075 17.0 6.4 1.2 1 0 0 1 1 1 1 zinc-ribbon family Fcf1 PF04900.12 NODE_59316_length_280_cov_55.036735_g51376_i0reverse_frame_1 - 0.025 15.0 1.3 0.037 14.4 1.3 1.4 1 1 0 1 1 1 0 Fcf1 Erf4 PF10256.9 NODE_59316_length_280_cov_55.036735_g51376_i0forward_frame_1 - 0.068 13.3 0.0 0.07 13.2 0.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family HTH_50 PF18024.1 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_1 - 0.18 11.4 0.0 0.38 10.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Soc PF16855.5 NODE_59303_length_280_cov_68.742857_g51363_i0reverse_frame_1 - 0.0084 16.6 0.5 0.027 14.9 0.1 1.8 1 1 1 2 2 2 1 Small outer capsid protein DUF4848 PF16140.5 NODE_59294_length_280_cov_83.036735_g51354_i0reverse_frame_1 - 0.029 13.9 0.4 0.036 13.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4848) Phage_ASH PF10554.9 NODE_59290_length_280_cov_104.461224_g51350_i0reverse_frame_1 - 0.1 13.0 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Ash protein family Gag_p19 PF02228.16 NODE_59288_length_280_cov_122.204082_g51348_i0reverse_frame_1 - 0.057 13.9 0.0 0.077 13.4 0.0 1.3 1 0 0 1 1 1 0 Major core protein p19 RF3_C PF16658.5 NODE_59281_length_280_cov_177.538776_g51341_i0reverse_frame_1 - 0.064 13.1 0.0 0.072 12.9 0.0 1.1 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain MTBP_mid PF14919.6 NODE_59279_length_280_cov_193.351020_g51339_i0forward_frame_1 - 0.034 13.3 0.0 0.034 13.3 0.0 1.1 1 0 0 1 1 1 0 MDM2-binding DUF1422 PF07226.11 NODE_59278_length_280_cov_266.428571_g51338_i0forward_frame_1 - 0.11 12.5 2.4 0.13 12.3 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) TMEM190 PF15431.6 NODE_59278_length_280_cov_266.428571_g51338_i0forward_frame_1 - 1.7 8.8 9.5 10 6.3 5.6 2.1 1 1 1 2 2 2 0 Transmembrane protein 190 Pathogen_betaC1 PF09593.10 NODE_59266_length_281_cov_1.313008_g51326_i0reverse_frame_1 - 0.00059 19.8 1.4 0.01 15.7 1.4 2.1 1 1 0 1 1 1 1 Beta-satellite pathogenicity beta C1 protein RBD PF02196.15 NODE_59266_length_281_cov_1.313008_g51326_i0reverse_frame_1 - 0.091 12.8 0.1 0.7 10.0 0.1 2.0 1 1 0 1 1 1 0 Raf-like Ras-binding domain BaffR-Tall_bind PF09256.10 NODE_59263_length_281_cov_1.341463_g51323_i0forward_frame_1 - 0.27 11.0 0.5 0.27 11.0 0.5 1.8 2 0 0 2 2 2 0 BAFF-R, TALL-1 binding PCNA_N PF00705.18 NODE_59254_length_281_cov_1.573171_g51314_i0reverse_frame_1 - 2e-16 59.8 0.6 2.7e-16 59.4 0.6 1.1 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain HypD PF01924.16 NODE_59251_length_281_cov_1.613821_g51311_i0reverse_frame_1 - 0.24 10.5 2.6 0.26 10.3 2.6 1.1 1 0 0 1 1 1 0 Hydrogenase formation hypA family Somatomedin_B PF01033.17 NODE_59251_length_281_cov_1.613821_g51311_i0reverse_frame_1 - 0.73 10.3 10.0 1.1 9.7 10.0 1.3 1 0 0 1 1 1 0 Somatomedin B domain zf-RING_11 PF17123.5 NODE_59249_length_281_cov_1.621951_g51309_i0forward_frame_1 - 1.2 8.9 10.4 1.1 9.1 4.6 2.9 2 1 0 2 2 2 0 RING-like zinc finger HTH_37 PF13744.6 NODE_59242_length_281_cov_1.768293_g51302_i0forward_frame_1 - 0.16 11.9 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain ABC_tran PF00005.27 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 9.6e-15 55.3 0.0 1e-14 55.2 0.0 1.0 1 0 0 1 1 1 1 ABC transporter AAA_23 PF13476.6 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.00047 20.7 1.8 0.00059 20.4 1.8 1.5 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.002 17.8 0.6 0.0052 16.4 0.5 1.6 1 1 1 2 2 2 1 SRP54-type protein, GTPase domain MMR_HSR1 PF01926.23 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.0026 17.8 0.0 0.0029 17.7 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.0047 16.9 0.1 0.006 16.5 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase Roc PF08477.13 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.0071 16.6 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA_13 PF13166.6 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.068 11.8 0.0 0.072 11.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.092 13.2 0.2 0.1 13.0 0.2 1.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) FeoB_N PF02421.18 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.12 11.9 0.1 0.19 11.3 0.1 1.4 1 0 0 1 1 1 0 Ferrous iron transport protein B AAA_29 PF13555.6 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.16 11.7 0.5 0.31 10.8 0.5 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_1 - 0.2 11.4 0.1 0.22 11.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain Humanin PF15040.6 NODE_59226_length_281_cov_2.012195_g51286_i0reverse_frame_1 - 0.066 12.7 1.7 0.13 11.7 1.7 1.5 1 0 0 1 1 1 0 Humanin family Pro_CA PF00484.19 NODE_59226_length_281_cov_2.012195_g51286_i0forward_frame_1 - 0.063 13.6 0.2 0.073 13.4 0.2 1.1 1 0 0 1 1 1 0 Carbonic anhydrase Staygreen PF12638.7 NODE_59225_length_281_cov_2.028455_g51285_i0forward_frame_1 - 0.11 12.2 0.3 0.43 10.4 0.1 1.7 1 1 1 2 2 2 0 Staygreen protein DUF1176 PF06674.11 NODE_59224_length_281_cov_2.182927_g51284_i0reverse_frame_1 - 0.06 12.8 0.1 0.06 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1176) ESCRT-II PF05871.12 NODE_59214_length_281_cov_2.577236_g51274_i0forward_frame_1 - 0.098 12.9 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 ESCRT-II complex subunit Fim-adh_lectin PF09222.10 NODE_59206_length_281_cov_2.780488_g51266_i0reverse_frame_1 - 0.13 11.7 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 Fimbrial adhesin F17-AG, lectin domain CSM2 PF16834.5 NODE_59202_length_281_cov_3.126016_g51262_i0reverse_frame_1 - 0.071 12.7 0.6 0.092 12.4 0.4 1.4 1 1 0 1 1 1 0 Shu complex component Csm2, DNA-binding RHH_5 PF07878.11 NODE_59202_length_281_cov_3.126016_g51262_i0forward_frame_1 - 0.18 11.7 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 zf-CSL PF05207.13 NODE_59197_length_281_cov_3.593496_g51257_i0forward_frame_1 - 0.63 9.8 9.5 1.5 8.6 9.4 1.7 1 1 1 2 2 2 0 CSL zinc finger CXCL17 PF15211.6 NODE_59195_length_281_cov_4.069106_g51255_i0forward_frame_1 - 0.014 16.1 2.9 0.014 16.1 2.9 2.2 1 1 1 2 2 2 0 VEGF co-regulated chemokine 1 CSS-motif PF12792.7 NODE_59192_length_281_cov_4.548780_g51252_i0forward_frame_1 - 8.9e-21 74.3 0.0 1e-20 74.2 0.0 1.0 1 0 0 1 1 1 1 CSS motif domain associated with EAL TMEM239 PF15841.5 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_1 - 2.2 8.2 6.6 2.6 8.0 6.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family DUF5359 PF17313.2 NODE_59178_length_281_cov_67.601626_g51238_i0forward_frame_1 - 0.14 12.1 0.3 0.14 12.1 0.3 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5359) BRE1 PF08647.11 NODE_59175_length_281_cov_72.857724_g51235_i0reverse_frame_1 - 0.043 13.9 0.3 0.051 13.7 0.3 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase zf-C3HC4_4 PF15227.6 NODE_59169_length_281_cov_81.024390_g51229_i0reverse_frame_1 - 0.39 10.9 7.0 0.35 11.1 5.2 1.8 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING DUF4761 PF15958.5 NODE_59168_length_281_cov_83.666667_g51228_i0reverse_frame_1 - 0.16 12.1 0.0 0.26 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4761) FAM199X PF15814.5 NODE_59168_length_281_cov_83.666667_g51228_i0forward_frame_1 - 0.036 13.1 2.9 0.037 13.1 2.9 1.0 1 0 0 1 1 1 0 Protein family FAM199X HMw1_D2 PF18254.1 NODE_59168_length_281_cov_83.666667_g51228_i0forward_frame_1 - 0.16 12.4 1.2 12 6.4 0.4 2.1 2 0 0 2 2 2 0 HMW1 domain 2 zf-PHD-like PF15446.6 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 0.011 15.4 4.5 0.011 15.3 4.5 1.1 1 0 0 1 1 1 0 PHD/FYVE-zinc-finger like domain FAM176 PF14851.6 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 1.2 8.8 4.5 1.6 8.4 4.5 1.3 1 0 0 1 1 1 0 FAM176 family FancD2 PF14631.6 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 1.8 5.9 11.8 1.9 5.8 11.8 1.0 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease Connexin PF00029.19 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 2 8.1 6.7 2.2 8.0 6.7 1.1 1 0 0 1 1 1 0 Connexin SR-25 PF10500.9 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 2 8.0 27.5 2.6 7.6 27.5 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Zip PF02535.22 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 2.5 7.3 6.2 2.7 7.1 6.2 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF1980 PF09323.10 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 4 7.3 8.7 4.4 7.2 8.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Presenilin PF01080.17 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_1 - 8.5 5.0 11.0 8.9 5.0 11.0 1.0 1 0 0 1 1 1 0 Presenilin DUF4746 PF15928.5 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 0.81 9.0 12.1 0.87 8.9 12.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) PBP_sp32 PF07222.12 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 0.9 8.9 15.8 1.1 8.6 15.8 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Rhomboid_N PF12122.8 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 1.3 9.2 6.7 6.3 7.0 0.3 2.8 2 1 1 3 3 3 0 Cytoplasmic N-terminal domain of rhomboid serine protease PPL5 PF18168.1 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 4.3 6.6 10.1 4.3 6.6 10.1 1.2 1 0 0 1 1 1 0 Prim-pol family 5 FAM176 PF14851.6 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_1 - 9 5.9 14.4 12 5.5 14.4 1.3 1 1 0 1 1 1 0 FAM176 family RCC1_2 PF13540.6 NODE_59164_length_281_cov_116.186992_g51224_i0reverse_frame_1 - 1.9e-06 27.5 2.5 0.012 15.4 0.1 2.8 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_59164_length_281_cov_116.186992_g51224_i0reverse_frame_1 - 0.063 13.4 0.1 2.2 8.3 0.1 2.1 1 1 0 1 1 1 0 Uncharacterised ACR, YagE family COG1723 Nuc_N PF14448.6 NODE_59164_length_281_cov_116.186992_g51224_i0reverse_frame_1 - 0.13 12.2 3.1 13 5.7 0.0 3.2 2 1 1 3 3 3 0 Nuclease N terminal RESP18 PF14948.6 NODE_59163_length_281_cov_116.434959_g51223_i0reverse_frame_1 - 0.031 14.6 0.1 0.037 14.3 0.1 1.1 1 0 0 1 1 1 0 RESP18 domain Tmemb_185A PF10269.9 NODE_59162_length_281_cov_119.239837_g51222_i0forward_frame_1 - 0.007 16.1 2.0 0.0079 15.9 2.0 1.0 1 0 0 1 1 1 1 Transmembrane Fragile-X-F protein IBN_N PF03810.19 NODE_59159_length_281_cov_125.995935_g51219_i0reverse_frame_1 - 0.011 15.7 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Importin-beta N-terminal domain GntR PF00392.21 NODE_59159_length_281_cov_125.995935_g51219_i0forward_frame_1 - 0.05 13.3 0.5 1.5 8.6 0.0 2.4 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family THOC2_N PF16134.5 NODE_59158_length_281_cov_134.105691_g51218_i0forward_frame_1 - 0.053 12.1 0.0 0.064 11.9 0.0 1.1 1 0 0 1 1 1 0 THO complex subunit 2 N-terminus GramPos_pilinBB PF16569.5 NODE_59157_length_281_cov_138.837398_g51217_i0forward_frame_1 - 0.071 13.9 0.7 0.082 13.7 0.7 1.2 1 0 0 1 1 1 0 Gram-positive pilin backbone subunit 2, Cna-B-like domain DUF1410 PF07198.11 NODE_59157_length_281_cov_138.837398_g51217_i0forward_frame_1 - 0.079 13.5 0.0 0.1 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1410) AdoHcyase_NAD PF00670.21 NODE_59156_length_281_cov_146.967480_g51216_i0reverse_frame_1 - 0.09 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EF-hand_1 PF00036.32 NODE_59155_length_281_cov_148.743902_g51215_i0reverse_frame_1 - 0.17 11.5 0.6 0.29 10.8 0.1 1.6 2 0 0 2 2 2 0 EF hand DUF5552 PF17706.1 NODE_59154_length_281_cov_152.069106_g51214_i0forward_frame_1 - 0.077 12.7 3.2 0.07 12.8 1.9 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5552) Cellulase-like PF12876.7 NODE_59144_length_281_cov_549.609756_g51204_i0reverse_frame_1 - 0.026 13.9 0.2 0.026 13.9 0.2 1.0 1 0 0 1 1 1 0 Sugar-binding cellulase-like MFS_1 PF07690.16 NODE_59139_length_282_cov_0.967611_g51199_i0reverse_frame_1 - 0.00016 20.8 3.3 0.00018 20.5 3.3 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily BH3 PF15285.6 NODE_59139_length_282_cov_0.967611_g51199_i0forward_frame_1 - 0.19 11.5 0.0 0.41 10.5 0.0 1.5 2 0 0 2 2 2 0 Beclin-1 BH3 domain, Bcl-2-interacting DUF1145 PF06611.12 NODE_59135_length_282_cov_1.129555_g51195_i0forward_frame_1 - 0.057 13.4 0.3 0.099 12.6 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1145) CMAS PF02353.20 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 3.7e-18 65.8 0.1 4.3e-18 65.6 0.1 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 4e-06 26.8 0.0 4.3e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 1.4e-05 25.7 0.0 1.7e-05 25.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 6.8e-05 23.5 0.0 8.8e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.00076 20.1 0.0 0.001 19.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Spermine_synth PF01564.17 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.015 14.7 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 Spermine/spermidine synthase domain Methyltransf_PK PF05891.12 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.037 13.5 0.1 0.043 13.3 0.1 1.0 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase Methyltransf_31 PF13847.6 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.075 12.8 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Spore_II_R PF09551.10 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.083 13.4 0.0 0.097 13.1 0.0 1.2 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) DUF938 PF06080.12 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.12 12.1 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF938) LPD28 PF18843.1 NODE_59128_length_282_cov_1.287449_g51188_i0forward_frame_1 - 0.14 11.8 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein associated domain 28 PGBA_N PF15436.6 NODE_59117_length_282_cov_1.582996_g51177_i0reverse_frame_1 - 0.063 12.9 0.2 0.078 12.6 0.2 1.1 1 0 0 1 1 1 0 Plasminogen-binding protein pgbA N-terminal PH_8 PF15409.6 NODE_59117_length_282_cov_1.582996_g51177_i0reverse_frame_1 - 0.079 13.3 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain PNTB PF02233.16 NODE_59116_length_282_cov_1.607287_g51176_i0forward_frame_1 - 0.037 13.0 0.1 0.041 12.8 0.1 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit Adeno_E1B_55K PF01696.17 NODE_59113_length_282_cov_1.655870_g51173_i0forward_frame_1 - 0.088 11.5 0.0 0.12 11.0 0.0 1.2 1 0 0 1 1 1 0 Adenovirus EB1 55K protein / large t-antigen ALG3 PF05208.13 NODE_59108_length_282_cov_1.736842_g51168_i0forward_frame_1 - 0.0097 15.4 1.9 0.0096 15.4 1.9 1.0 1 0 0 1 1 1 1 ALG3 protein Milton PF12448.8 NODE_59107_length_282_cov_1.740891_g51167_i0reverse_frame_1 - 0.0038 17.4 0.3 0.0045 17.1 0.3 1.1 1 0 0 1 1 1 1 Kinesin associated protein X8 PF07983.13 NODE_59098_length_282_cov_1.846154_g51158_i0reverse_frame_1 - 0.061 14.0 0.3 0.075 13.7 0.3 1.2 1 0 0 1 1 1 0 X8 domain Zemlya PF17646.1 NODE_59092_length_282_cov_2.064777_g51152_i0reverse_frame_1 - 0.088 13.2 0.3 0.098 13.0 0.3 1.0 1 0 0 1 1 1 0 Closterovirus 1a polyprotein central region DUF588 PF04535.12 NODE_59091_length_282_cov_2.101215_g51151_i0reverse_frame_1 - 0.012 15.5 0.8 0.013 15.3 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF588) HPS6 PF15702.5 NODE_59091_length_282_cov_2.101215_g51151_i0reverse_frame_1 - 0.035 12.1 0.1 0.039 11.9 0.1 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein DUF4525 PF15027.6 NODE_59086_length_282_cov_2.259109_g51146_i0forward_frame_1 - 0.14 11.9 0.3 0.18 11.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) Strumpellin PF10266.9 NODE_59085_length_282_cov_2.267206_g51145_i0forward_frame_1 - 7e-06 24.1 0.0 7.5e-06 24.0 0.0 1.0 1 0 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin Filament PF00038.21 NODE_59085_length_282_cov_2.267206_g51145_i0forward_frame_1 - 0.13 11.8 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 Intermediate filament protein DUF682 PF05081.12 NODE_59083_length_282_cov_2.271255_g51143_i0reverse_frame_1 - 0.088 12.5 1.5 0.11 12.3 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF682) DUF1190 PF06693.11 NODE_59081_length_282_cov_2.303644_g51141_i0forward_frame_1 - 3.6e-24 86.0 5.5 3.8e-24 85.9 5.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1190) Pex24p PF06398.11 NODE_59063_length_282_cov_2.716599_g51123_i0reverse_frame_1 - 0.012 14.7 0.4 0.017 14.2 0.1 1.3 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin TusA PF01206.17 NODE_59057_length_282_cov_3.105263_g51117_i0reverse_frame_1 - 0.043 13.6 0.9 6.1 6.7 0.0 2.9 3 0 0 3 3 3 0 Sulfurtransferase TusA FTR PF01913.18 NODE_59053_length_282_cov_3.392713_g51113_i0reverse_frame_1 - 0.027 14.4 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase DUF3439 PF11921.8 NODE_59049_length_282_cov_4.473684_g51109_i0forward_frame_1 - 0.054 13.5 5.0 0.061 13.3 5.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) KCNQC3-Ank-G_bd PF11956.8 NODE_59046_length_282_cov_7.311741_g51106_i0reverse_frame_1 - 0.0078 16.5 0.4 0.01 16.1 0.4 1.2 1 0 0 1 1 1 1 Ankyrin-G binding motif of KCNQ2-3 zf-C2H2_6 PF13912.6 NODE_59039_length_282_cov_48.465587_g51099_i0forward_frame_1 - 0.01 15.8 2.3 0.019 15.0 2.3 1.4 1 0 0 1 1 1 0 C2H2-type zinc finger DUF1289 PF06945.13 NODE_59036_length_282_cov_54.356275_g51096_i0forward_frame_1 - 0.65 9.8 5.4 1.4 8.8 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1289) Peptidase_M64 PF09471.10 NODE_59031_length_282_cov_58.979757_g51091_i0forward_frame_1 - 0.013 15.1 0.4 0.013 15.1 0.4 1.1 1 0 0 1 1 1 0 IgA Peptidase M64 Histone_H2A_C PF16211.5 NODE_59030_length_282_cov_61.668016_g51090_i0reverse_frame_1 - 1.2 8.9 4.8 0.39 10.5 2.2 1.6 2 0 0 2 2 2 0 C-terminus of histone H2A Gyro_capsid PF04162.12 NODE_59026_length_282_cov_65.497976_g51086_i0forward_frame_1 - 1.6 7.1 4.2 1.9 6.9 4.2 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) SR-25 PF10500.9 NODE_59012_length_282_cov_107.068826_g51072_i0forward_frame_1 - 0.037 13.6 6.3 0.042 13.5 6.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3902 PF13042.6 NODE_59010_length_282_cov_109.356275_g51070_i0reverse_frame_1 - 0.0059 16.2 0.2 0.0072 15.9 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3902) ADP_PFK_GK PF04587.15 NODE_59009_length_282_cov_115.676113_g51069_i0reverse_frame_1 - 0.16 10.5 0.1 0.16 10.5 0.1 1.1 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region zf-HC3 PF16827.5 NODE_59002_length_282_cov_177.093117_g51062_i0forward_frame_1 - 0.053 13.7 0.2 0.11 12.7 0.0 1.6 2 0 0 2 2 2 0 zinc-finger Ig_GlcNase PF18368.1 NODE_59001_length_282_cov_219.728745_g51061_i0reverse_frame_1 - 0.17 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Exo-beta-D-glucosaminidase Ig-fold domain E_raikovi_mat PF06360.11 NODE_59001_length_282_cov_219.728745_g51061_i0forward_frame_1 - 1.1 9.8 5.6 0.3 11.6 2.9 1.4 2 0 0 2 2 2 0 Euplotes raikovi mating pheromone ATG22 PF11700.8 NODE_59000_length_282_cov_220.923077_g51060_i0reverse_frame_1 - 0.095 11.3 0.9 0.11 11.2 0.9 1.0 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like Cobl PF09469.10 NODE_58998_length_282_cov_252.878543_g51058_i0forward_frame_1 - 0.12 12.7 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Cordon-bleu ubiquitin-like domain PDZ_1 PF12812.7 NODE_58994_length_282_cov_445.510121_g51055_i0reverse_frame_1 - 0.066 13.2 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 PDZ-like domain Glyco_transf_41 PF13844.6 NODE_58992_length_283_cov_0.967742_g51053_i0reverse_frame_2 - 0.029 12.8 0.1 0.032 12.7 0.1 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 41 Arteri_Gl PF00951.18 NODE_58990_length_283_cov_1.044355_g51051_i0forward_frame_2 - 0.034 14.0 0.1 0.06 13.2 0.0 1.5 1 1 1 2 2 2 0 Arterivirus GL envelope glycoprotein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks283.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks283.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks283.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks283.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2830 PF11125.8 NODE_58986_length_283_cov_1.270161_g51047_i0reverse_frame_3 - 5.7 7.0 10.5 0.55 10.3 4.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2830) AMA-1 PF02430.15 NODE_58986_length_283_cov_1.270161_g51047_i0forward_frame_2 - 0.15 11.0 0.7 0.17 10.8 0.7 1.0 1 0 0 1 1 1 0 Apical membrane antigen 1 TP2 PF01254.18 NODE_58984_length_283_cov_1.290323_g51045_i0reverse_frame_2 - 0.19 12.3 4.6 0.23 12.1 4.6 1.0 1 0 0 1 1 1 0 Nuclear transition protein 2 SelP_N PF04592.14 NODE_58984_length_283_cov_1.290323_g51045_i0forward_frame_3 - 0.055 12.9 3.2 0.061 12.7 3.2 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Cpn60_TCP1 PF00118.24 NODE_58983_length_283_cov_1.290323_g51044_i0forward_frame_3 - 7.6e-23 80.9 0.1 8e-23 80.8 0.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Orf78 PF06024.12 NODE_58980_length_283_cov_1.370968_g51041_i0reverse_frame_2 - 0.17 12.2 0.5 0.27 11.6 0.3 1.4 1 1 0 1 1 1 0 Orf78 (ac78) Clathrin_propel PF01394.20 NODE_58979_length_283_cov_1.391129_g51040_i0reverse_frame_3 - 0.00044 20.4 0.8 0.0007 19.8 0.8 1.3 1 0 0 1 1 1 1 Clathrin propeller repeat FAD_SOX PF18371.1 NODE_58975_length_283_cov_1.451613_g51036_i0forward_frame_3 - 0.02 15.3 0.1 0.022 15.1 0.1 1.1 1 0 0 1 1 1 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase NinE PF05322.11 NODE_58974_length_283_cov_1.491935_g51035_i0forward_frame_3 - 0.0013 18.5 1.6 0.0018 18.1 1.6 1.3 1 0 0 1 1 1 1 NINE Protein PH_4 PF15404.6 NODE_58973_length_283_cov_1.495968_g51034_i0forward_frame_2 - 0.08 12.7 0.3 0.1 12.4 0.3 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain Peptidase_C39 PF03412.15 NODE_58970_length_283_cov_1.560484_g51031_i0reverse_frame_3 - 0.13 12.1 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 Peptidase C39 family SERTA PF06031.13 NODE_58968_length_283_cov_1.564516_g51029_i0reverse_frame_2 - 0.88 9.3 5.9 1.6 8.4 0.2 2.9 3 0 0 3 3 3 0 SERTA motif Fanconi_A_N PF15865.5 NODE_58965_length_283_cov_1.612903_g51026_i0reverse_frame_3 - 0.0079 15.6 0.1 0.0093 15.4 0.1 1.1 1 0 0 1 1 1 1 Fanconi anaemia group A protein N terminus MASE3 PF17159.4 NODE_58965_length_283_cov_1.612903_g51026_i0reverse_frame_2 - 0.057 13.0 0.2 0.067 12.8 0.2 1.1 1 0 0 1 1 1 0 Membrane-associated sensor domain Saf_2TM PF18303.1 NODE_58965_length_283_cov_1.612903_g51026_i0reverse_frame_2 - 0.064 12.8 0.1 0.07 12.7 0.1 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain ATP1G1_PLM_MAT8 PF02038.16 NODE_58965_length_283_cov_1.612903_g51026_i0reverse_frame_2 - 0.44 10.0 2.6 0.67 9.4 2.6 1.3 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family DUF2188 PF09954.9 NODE_58964_length_283_cov_1.616935_g51025_i0forward_frame_2 - 0.021 14.9 0.0 0.036 14.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2188) DUF5549 PF17703.1 NODE_58962_length_283_cov_1.758065_g51023_i0reverse_frame_2 - 0.49 10.0 7.2 0.54 9.9 7.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) Nucleoporin_FG PF13634.6 NODE_58961_length_283_cov_1.766129_g51022_i0forward_frame_2 - 1.8 9.5 24.8 9.8 7.1 24.8 1.9 1 1 0 1 1 1 0 Nucleoporin FG repeat region DUF3045 PF11243.8 NODE_58958_length_283_cov_1.782258_g51019_i0forward_frame_2 - 0.13 12.4 0.2 2.1 8.6 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3045) FHA PF00498.26 NODE_58955_length_283_cov_1.854839_g51016_i0reverse_frame_2 - 0.1 13.0 0.0 0.28 11.5 0.0 1.7 2 0 0 2 2 2 0 FHA domain Kinesin_assoc PF16183.5 NODE_58954_length_283_cov_1.895161_g51015_i0forward_frame_3 - 3.2e-05 24.2 0.1 4.7e-05 23.6 0.1 1.2 1 0 0 1 1 1 1 Kinesin-associated Caldesmon PF02029.15 NODE_58954_length_283_cov_1.895161_g51015_i0forward_frame_3 - 0.0017 17.2 2.3 0.0019 17.1 2.3 1.1 1 0 0 1 1 1 1 Caldesmon DUF1068 PF06364.12 NODE_58949_length_283_cov_1.991935_g51010_i0reverse_frame_3 - 0.051 13.4 1.7 0.062 13.2 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) DUF3447 PF11929.8 NODE_58949_length_283_cov_1.991935_g51010_i0forward_frame_3 - 0.019 14.9 0.3 0.019 14.9 0.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3447) RVT_1 PF00078.27 NODE_58947_length_283_cov_2.040323_g51008_i0forward_frame_2 - 0.0038 16.8 0.0 0.0041 16.7 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) O-ag_pol_Wzy PF14296.6 NODE_58943_length_283_cov_2.141129_g51004_i0forward_frame_3 - 0.19 10.3 1.2 0.28 9.8 1.2 1.2 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy Chitin_synth_2 PF03142.15 NODE_58941_length_283_cov_2.153226_g51002_i0forward_frame_2 - 0.00022 20.0 0.1 0.00024 19.9 0.1 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 NODE_58941_length_283_cov_2.153226_g51002_i0forward_frame_2 - 0.0007 19.6 0.1 0.0007 19.6 0.1 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 NODE_58941_length_283_cov_2.153226_g51002_i0forward_frame_2 - 0.0063 16.4 0.0 0.0072 16.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 HSP70 PF00012.20 NODE_58939_length_283_cov_2.173387_g51000_i0reverse_frame_3 - 9.4e-07 27.4 0.0 1e-06 27.2 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein RAP PF08373.10 NODE_58937_length_283_cov_2.258065_g50998_i0reverse_frame_2 - 0.065 13.3 4.2 0.26 11.4 1.6 2.7 1 1 1 2 2 2 0 RAP domain Prenyltransf PF01255.19 NODE_58934_length_283_cov_2.330645_g50995_i0reverse_frame_3 - 0.094 12.2 0.0 0.099 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative undecaprenyl diphosphate synthase Ion_trans_2 PF07885.16 NODE_58930_length_283_cov_2.491935_g50991_i0forward_frame_3 - 3.3e-13 49.4 4.0 3.3e-13 49.4 4.0 1.1 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 NODE_58930_length_283_cov_2.491935_g50991_i0forward_frame_3 - 3.2e-08 33.1 1.9 3.2e-08 33.1 1.9 1.0 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 NODE_58930_length_283_cov_2.491935_g50991_i0forward_frame_3 - 0.0011 18.8 0.8 0.0014 18.5 0.8 1.2 1 0 0 1 1 1 1 Ligand-gated ion channel UCH_1 PF13423.6 NODE_58920_length_283_cov_2.895161_g50981_i0reverse_frame_3 - 0.17 11.5 0.3 0.16 11.5 0.3 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase DAP10 PF07213.11 NODE_58918_length_283_cov_2.979839_g50979_i0reverse_frame_3 - 7.5 6.6 8.7 1.2 9.1 5.4 1.5 1 1 0 1 1 1 0 DAP10 membrane protein HEAT PF02985.22 NODE_58911_length_283_cov_3.370968_g50972_i0forward_frame_3 - 0.035 14.3 0.1 2.7 8.5 0.0 2.3 2 0 0 2 2 2 0 HEAT repeat Calc_CGRP_IAPP PF00214.19 NODE_58909_length_283_cov_3.572581_g50970_i0forward_frame_2 - 0.034 14.5 0.0 0.035 14.4 0.0 1.2 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family IGR PF09597.10 NODE_58909_length_283_cov_3.572581_g50970_i0forward_frame_2 - 0.11 12.6 0.3 0.17 12.0 0.3 1.3 1 0 0 1 1 1 0 IGR protein motif Tme5_EGF_like PF09064.10 NODE_58907_length_283_cov_3.725806_g50968_i0forward_frame_3 - 0.009 15.9 9.6 0.012 15.5 2.9 3.0 3 0 0 3 3 3 1 Thrombomodulin like fifth domain, EGF-like zf-C3Hc3H PF13891.6 NODE_58904_length_283_cov_5.068548_g50965_i0forward_frame_2 - 0.054 13.9 0.1 0.09 13.2 0.1 1.4 1 1 0 1 1 1 0 Potential DNA-binding domain CPBP PF02517.16 NODE_58904_length_283_cov_5.068548_g50965_i0forward_frame_2 - 3.5 8.1 10.8 9.3 6.7 10.8 1.8 1 1 0 1 1 1 0 CPBP intramembrane metalloprotease DUF2315 PF10231.9 NODE_58901_length_283_cov_5.955645_g50962_i0forward_frame_2 - 0.39 10.8 5.9 0.5 10.5 5.9 1.1 1 0 0 1 1 1 0 Apoptogenic protein 1 RGS12_us2 PF16611.5 NODE_58900_length_283_cov_13.274194_g50961_i0forward_frame_2 - 0.05 14.0 0.1 0.078 13.4 0.1 1.2 1 0 0 1 1 1 0 Unstructured region between RBD and GoLoco Ephrin_rec_like PF07699.13 NODE_58894_length_283_cov_43.354839_g50955_i0reverse_frame_3 - 9.3e-06 25.3 8.0 0.0037 17.0 2.9 2.4 1 1 1 2 2 2 2 Putative ephrin-receptor like Hyd_WA PF06462.12 NODE_58894_length_283_cov_43.354839_g50955_i0forward_frame_3 - 0.25 11.4 2.1 7.5 6.6 0.1 2.3 2 0 0 2 2 2 0 Propeller Flexi_CP PF00286.20 NODE_58890_length_283_cov_51.891129_g50951_i0forward_frame_2 - 0.033 14.1 1.2 0.04 13.9 1.2 1.0 1 0 0 1 1 1 0 Viral coat protein Tmemb_14 PF03647.13 NODE_58889_length_283_cov_52.427419_g50950_i0forward_frame_2 - 1.7e-10 41.5 2.5 2.2e-10 41.1 2.5 1.1 1 0 0 1 1 1 1 Transmembrane proteins 14C DUF2369 PF10179.9 NODE_58888_length_283_cov_53.020161_g50949_i0forward_frame_3 - 0.05 14.0 0.5 0.061 13.7 0.5 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2369) SRP72 PF08492.12 NODE_58888_length_283_cov_53.020161_g50949_i0forward_frame_3 - 0.19 12.2 5.0 0.28 11.6 4.9 1.5 1 1 0 1 1 1 0 SRP72 RNA-binding domain zf-RanBP PF00641.18 NODE_58887_length_283_cov_53.048387_g50948_i0forward_frame_2 - 2.7e-07 29.8 1.2 3.6e-07 29.4 1.2 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others Vps36-NZF-N PF16988.5 NODE_58887_length_283_cov_53.048387_g50948_i0forward_frame_2 - 0.47 9.9 3.1 1.5 8.3 3.1 1.8 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Pinin_SDK_memA PF04696.13 NODE_58885_length_283_cov_56.939516_g50946_i0reverse_frame_3 - 0.042 13.9 5.5 0.049 13.7 5.5 1.1 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region IgaA PF07095.11 NODE_58885_length_283_cov_56.939516_g50946_i0forward_frame_3 - 0.38 8.7 1.3 0.46 8.4 1.3 1.0 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA NPCC PF08058.11 NODE_58885_length_283_cov_56.939516_g50946_i0forward_frame_3 - 0.73 9.9 5.6 0.89 9.6 5.6 1.1 1 0 0 1 1 1 0 Nuclear pore complex component DUF4239 PF14023.6 NODE_58885_length_283_cov_56.939516_g50946_i0forward_frame_3 - 1.5 8.5 6.8 1.9 8.2 6.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) YlaC PF10777.9 NODE_58885_length_283_cov_56.939516_g50946_i0forward_frame_3 - 6.1 6.7 11.0 7.1 6.5 11.0 1.1 1 0 0 1 1 1 0 Inner membrane protein YlaC Spec3 PF15795.5 NODE_58882_length_283_cov_62.358871_g50943_i0reverse_frame_2 - 1.1e-07 32.3 3.7 1.6e-07 31.8 3.7 1.3 1 0 0 1 1 1 1 Ectodermal ciliogenesis protein Ribosomal_L11_N PF03946.14 NODE_58881_length_283_cov_62.403226_g50942_i0reverse_frame_3 - 0.12 12.3 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11, N-terminal domain Albumin_I PF08027.11 NODE_58879_length_283_cov_71.592742_g50940_i0forward_frame_2 - 3.6 7.3 6.4 1.2 8.8 0.2 2.7 2 1 1 3 3 3 0 Albumin I chain b Pox_polyA_pol_N PF12630.7 NODE_58873_length_283_cov_86.197581_g50934_i0reverse_frame_2 - 0.4 11.0 6.7 0.1 13.0 3.3 1.6 1 1 0 2 2 2 0 Poxvirus poly(A) polymerase N-terminal domain End3 PF12761.7 NODE_58865_length_283_cov_106.625000_g50926_i0reverse_frame_2 - 0.006 16.8 0.2 0.0066 16.6 0.2 1.0 1 0 0 1 1 1 1 Actin cytoskeleton-regulatory complex protein END3 YmgB PF10798.8 NODE_58862_length_283_cov_136.951613_g50923_i0forward_frame_3 - 0.0011 18.8 0.4 0.0016 18.2 0.4 1.2 1 0 0 1 1 1 1 Biofilm development protein YmgB/AriR CRR7 PF12095.8 NODE_58862_length_283_cov_136.951613_g50923_i0forward_frame_3 - 0.02 15.4 0.1 0.025 15.0 0.1 1.2 1 0 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 Noelin-1 PF12308.8 NODE_58859_length_283_cov_219.447581_g50920_i0forward_frame_3 - 0.13 12.3 0.3 0.2 11.7 0.3 1.3 1 0 0 1 1 1 0 Neurogenesis glycoprotein Amnionless PF14828.6 NODE_58851_length_284_cov_0.951807_g50912_i0reverse_frame_3 - 0.76 8.5 2.4 0.77 8.5 2.4 1.1 1 0 0 1 1 1 0 Amnionless RIFIN PF02009.16 NODE_58851_length_284_cov_0.951807_g50912_i0reverse_frame_3 - 2.9 7.7 4.8 3.6 7.4 4.8 1.1 1 0 0 1 1 1 0 Rifin PBP3 PF18056.1 NODE_58851_length_284_cov_0.951807_g50912_i0forward_frame_2 - 1.3 9.2 6.2 0.51 10.5 1.0 2.0 2 0 0 2 2 2 0 Penicillin Binding Protein 3 Domain DUF4653 PF15546.6 NODE_58850_length_284_cov_0.963855_g50911_i0reverse_frame_3 - 0.14 11.8 0.5 0.16 11.5 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4653) PMP1_2 PF08114.11 NODE_58850_length_284_cov_0.963855_g50911_i0forward_frame_2 - 0.13 12.0 3.7 0.28 11.0 1.8 2.1 2 0 0 2 2 2 0 ATPase proteolipid family SCRL PF06876.12 NODE_58847_length_284_cov_1.281124_g50908_i0reverse_frame_3 - 0.0015 18.6 1.5 0.0019 18.3 1.5 1.1 1 0 0 1 1 1 1 Plant self-incompatibility response (SCRL) protein DUF365 PF04033.12 NODE_58845_length_284_cov_1.313253_g50906_i0reverse_frame_3 - 0.02 15.1 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF365) SeqA_N PF17206.3 NODE_58845_length_284_cov_1.313253_g50906_i0forward_frame_2 - 0.88 8.9 2.5 0.43 9.9 0.2 1.7 2 0 0 2 2 2 0 SeqA protein N-terminal domain E3_UbLigase_EDD PF11547.8 NODE_58843_length_284_cov_1.373494_g50904_i0forward_frame_3 - 0.11 12.2 0.2 0.31 10.8 0.2 1.7 1 1 0 1 1 1 0 E3 ubiquitin ligase EDD PLATZ PF04640.14 NODE_58840_length_284_cov_1.397590_g50901_i0reverse_frame_3 - 1.4 9.6 9.2 1.8 9.3 9.2 1.3 1 0 0 1 1 1 0 PLATZ transcription factor CDC45 PF02724.14 NODE_58840_length_284_cov_1.397590_g50901_i0forward_frame_2 - 0.0032 15.8 2.8 0.0038 15.6 2.8 1.0 1 0 0 1 1 1 1 CDC45-like protein PIG-H PF10181.9 NODE_58838_length_284_cov_1.405622_g50899_i0reverse_frame_3 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 GPI-GlcNAc transferase complex, PIG-H component Pkinase PF00069.25 NODE_58838_length_284_cov_1.405622_g50899_i0reverse_frame_2 - 3.8e-27 95.3 0.0 4.3e-27 95.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58838_length_284_cov_1.405622_g50899_i0reverse_frame_2 - 3.5e-13 49.4 0.1 3.8e-13 49.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_58838_length_284_cov_1.405622_g50899_i0reverse_frame_2 - 0.029 13.7 0.0 0.042 13.2 0.0 1.3 1 1 0 1 1 1 0 Kinase-like Kazal_1 PF00050.21 NODE_58837_length_284_cov_1.405622_g50898_i0forward_frame_2 - 0.0066 16.4 1.5 3 7.9 0.4 2.2 2 0 0 2 2 2 2 Kazal-type serine protease inhibitor domain Inos-1-P_synth PF01658.17 NODE_58834_length_284_cov_1.429719_g50895_i0reverse_frame_2 - 0.013 15.8 0.4 0.016 15.4 0.4 1.0 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase Polyoma_lg_T_C PF06431.11 NODE_58834_length_284_cov_1.429719_g50895_i0reverse_frame_2 - 0.11 11.3 0.8 0.27 10.0 0.2 1.7 1 1 1 2 2 2 0 Polyomavirus large T antigen C-terminus Hid1 PF12722.7 NODE_58834_length_284_cov_1.429719_g50895_i0forward_frame_2 - 0.61 8.2 2.1 0.72 7.9 2.1 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Myb_DNA-bind_7 PF15963.5 NODE_58833_length_284_cov_1.445783_g50894_i0reverse_frame_2 - 0.036 14.0 4.8 0.046 13.6 4.4 1.3 1 1 0 1 1 1 0 Myb DNA-binding like TMEM119 PF15724.5 NODE_58832_length_284_cov_1.457831_g50893_i0reverse_frame_2 - 1.8 8.6 3.6 1.8 8.5 3.6 1.2 1 0 0 1 1 1 0 TMEM119 family UL11 PF11094.8 NODE_58830_length_284_cov_1.550201_g50891_i0forward_frame_3 - 0.087 12.7 2.5 1.8 8.5 1.1 2.4 2 0 0 2 2 2 0 Membrane-associated tegument protein LAM_C PF12544.8 NODE_58825_length_284_cov_1.626506_g50886_i0forward_frame_3 - 0.017 15.3 1.7 0.022 14.9 1.7 1.1 1 0 0 1 1 1 0 Lysine-2,3-aminomutase ORC_WH_C PF18137.1 NODE_58825_length_284_cov_1.626506_g50886_i0forward_frame_3 - 0.12 12.5 2.4 0.18 11.9 2.4 1.3 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal DUF5401 PF17380.2 NODE_58823_length_284_cov_1.670683_g50884_i0reverse_frame_2 - 0.045 11.9 0.1 0.045 11.9 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) SP_C-Propep PF08999.10 NODE_58823_length_284_cov_1.670683_g50884_i0forward_frame_3 - 0.029 14.1 0.4 0.039 13.7 0.4 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF1106 PF06523.11 NODE_58822_length_284_cov_1.674699_g50883_i0reverse_frame_3 - 0.011 15.8 0.2 0.014 15.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1106) ERGIC_N PF13850.6 NODE_58822_length_284_cov_1.674699_g50883_i0reverse_frame_3 - 0.013 15.9 0.2 0.017 15.4 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Yopt PF09467.10 NODE_58822_length_284_cov_1.674699_g50883_i0reverse_frame_3 - 0.066 13.3 0.0 2.4 8.3 0.0 2.2 2 0 0 2 2 2 0 Hypothetical protein Yopt SBP_bac_5 PF00496.22 NODE_58821_length_284_cov_1.686747_g50882_i0reverse_frame_3 - 9e-22 77.5 0.6 9.6e-22 77.4 0.6 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle GSG-1 PF07803.11 NODE_58819_length_284_cov_1.706827_g50880_i0forward_frame_3 - 0.05 13.5 0.3 0.068 13.1 0.2 1.4 1 1 0 1 1 1 0 GSG1-like protein C2 PF00168.30 NODE_58817_length_284_cov_1.799197_g50878_i0reverse_frame_2 - 0.036 14.4 0.0 0.072 13.4 0.0 1.5 1 0 0 1 1 1 0 C2 domain Thioredoxin PF00085.20 NODE_58817_length_284_cov_1.799197_g50878_i0forward_frame_2 - 0.017 15.1 0.2 0.023 14.7 0.2 1.2 1 0 0 1 1 1 0 Thioredoxin UEV PF05743.13 NODE_58817_length_284_cov_1.799197_g50878_i0forward_frame_2 - 0.057 13.3 0.2 0.07 13.0 0.2 1.2 1 0 0 1 1 1 0 UEV domain CDT1 PF08839.11 NODE_58816_length_284_cov_1.875502_g50877_i0reverse_frame_2 - 4.7e-07 30.3 0.1 5.2e-07 30.1 0.1 1.1 1 0 0 1 1 1 1 DNA replication factor CDT1 like DUF5592 PF17332.2 NODE_58815_length_284_cov_1.883534_g50876_i0forward_frame_2 - 2.6 8.7 11.6 0.28 11.8 6.4 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5592) TSGA13 PF14994.6 NODE_58814_length_284_cov_1.903614_g50875_i0forward_frame_2 - 0.045 13.1 0.0 0.048 13.0 0.0 1.1 1 0 0 1 1 1 0 Testis-specific gene 13 protein Methyltransf_30 PF05430.11 NODE_58813_length_284_cov_1.911647_g50874_i0forward_frame_2 - 1.9e-18 66.5 0.3 2.3e-18 66.2 0.3 1.1 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase TMEM237 PF15383.6 NODE_58811_length_284_cov_2.020080_g50872_i0reverse_frame_3 - 0.094 11.8 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 237 Pkinase_Tyr PF07714.17 NODE_58811_length_284_cov_2.020080_g50872_i0forward_frame_3 - 2e-06 27.3 0.0 2.7e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_58811_length_284_cov_2.020080_g50872_i0forward_frame_3 - 2e-05 24.1 0.0 2.2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase PF00069.25 NODE_58811_length_284_cov_2.020080_g50872_i0forward_frame_2 - 2.4e-10 40.2 0.0 2.5e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_58811_length_284_cov_2.020080_g50872_i0forward_frame_2 - 0.0044 16.3 0.0 0.0055 16.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3176 PF11374.8 NODE_58806_length_284_cov_2.140562_g50867_i0reverse_frame_3 - 0.13 12.5 0.8 2.2 8.6 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3176) TMEM171 PF15471.6 NODE_58806_length_284_cov_2.140562_g50867_i0forward_frame_2 - 0.7 8.8 4.3 0.87 8.5 4.3 1.2 1 0 0 1 1 1 0 Transmembrane protein family 171 DSX_dimer PF08828.10 NODE_58803_length_284_cov_2.321285_g50864_i0reverse_frame_3 - 0.0089 15.7 1.0 0.012 15.2 1.0 1.3 1 0 0 1 1 1 1 Doublesex dimerisation domain T4SS_CagC PF16943.5 NODE_58802_length_284_cov_2.321285_g50863_i0forward_frame_3 - 0.12 12.6 0.5 0.16 12.2 0.5 1.2 1 0 0 1 1 1 0 Cag pathogenicity island, type IV secretory system CDV3 PF15359.6 NODE_58799_length_284_cov_2.401606_g50860_i0reverse_frame_2 - 0.1 13.1 7.4 0.13 12.7 7.4 1.1 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 TT_ORF1 PF02956.14 NODE_58799_length_284_cov_2.401606_g50860_i0reverse_frame_2 - 5.9 5.4 7.3 5.5 5.6 7.3 1.0 1 0 0 1 1 1 0 TT viral orf 1 RGI1 PF10843.8 NODE_58797_length_284_cov_2.457831_g50858_i0reverse_frame_3 - 0.64 9.6 4.1 4.4 6.9 0.0 2.0 2 0 0 2 2 2 0 Respiratory growth induced protein 1 SR-25 PF10500.9 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_3 - 0.21 11.2 9.5 0.24 11.0 9.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_3 - 0.3 11.8 6.8 0.38 11.5 6.8 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF3357 PF11837.8 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_3 - 9.5 6.7 11.8 16 6.0 11.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3357) DUF4614 PF15391.6 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_2 - 0.6 10.1 5.9 0.63 10.0 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) SR-25 PF10500.9 NODE_58797_length_284_cov_2.457831_g50858_i0forward_frame_2 - 3.2 7.3 15.3 3.5 7.2 15.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HTH_8 PF02954.19 NODE_58795_length_284_cov_2.485944_g50856_i0forward_frame_2 - 1.6e-10 40.6 0.9 2.5e-10 39.9 0.9 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family Yeast_MT PF11403.8 NODE_58794_length_284_cov_2.538153_g50855_i0forward_frame_2 - 0.11 13.0 4.6 0.11 13.0 4.6 2.0 2 1 0 2 2 2 0 Yeast metallothionein SDH_C PF18317.1 NODE_58792_length_284_cov_2.558233_g50853_i0reverse_frame_2 - 0.15 11.9 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 Shikimate 5'-dehydrogenase C-terminal domain DUF639 PF04842.12 NODE_58790_length_284_cov_2.586345_g50851_i0forward_frame_3 - 0.092 12.1 0.2 0.65 9.4 0.0 1.9 2 0 0 2 2 2 0 Plant protein of unknown function (DUF639) IP_trans PF02121.18 NODE_58788_length_284_cov_2.654618_g50849_i0reverse_frame_3 - 0.035 13.7 0.4 0.035 13.7 0.4 1.2 1 0 0 1 1 1 0 Phosphatidylinositol transfer protein SlpA PF03217.14 NODE_58788_length_284_cov_2.654618_g50849_i0reverse_frame_2 - 0.0033 18.0 0.6 0.007 16.9 0.6 1.5 1 0 0 1 1 1 1 Surface later protein A domain Syntaxin-6_N PF09177.11 NODE_58788_length_284_cov_2.654618_g50849_i0reverse_frame_2 - 0.23 12.0 3.2 0.38 11.3 3.2 1.4 1 1 0 1 1 1 0 Syntaxin 6, N-terminal XhlA PF10779.9 NODE_58788_length_284_cov_2.654618_g50849_i0reverse_frame_2 - 2.4 8.4 9.7 0.96 9.7 1.1 2.1 1 1 1 2 2 2 0 Haemolysin XhlA SRCR PF00530.18 NODE_58785_length_284_cov_2.755020_g50846_i0forward_frame_2 - 0.085 13.4 0.0 0.13 12.8 0.0 1.4 1 1 0 1 1 1 0 Scavenger receptor cysteine-rich domain PTCRA PF15028.6 NODE_58784_length_284_cov_2.791165_g50845_i0reverse_frame_2 - 0.15 11.8 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Pre-T-cell antigen receptor Pertactin PF03212.14 NODE_58780_length_284_cov_3.132530_g50841_i0forward_frame_2 - 5.3e-24 84.5 0.6 6e-24 84.3 0.6 1.0 1 0 0 1 1 1 1 Pertactin GBV-C_env PF12786.7 NODE_58777_length_284_cov_3.325301_g50838_i0reverse_frame_3 - 0.088 11.5 2.2 0.12 11.0 2.1 1.4 1 1 0 1 1 1 0 GB virus C genotype envelope DUF2101 PF09874.9 NODE_58777_length_284_cov_3.325301_g50838_i0reverse_frame_3 - 2.3 7.9 12.8 2.7 7.7 12.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) GlcV_C_terminal PF17847.1 NODE_58777_length_284_cov_3.325301_g50838_i0reverse_frame_2 - 0.082 13.4 0.2 0.13 12.7 0.2 1.3 1 0 0 1 1 1 0 Glucose ABC transporter C-terminal domain DUF1700 PF08006.11 NODE_58777_length_284_cov_3.325301_g50838_i0forward_frame_3 - 0.18 11.4 11.0 0.2 11.2 11.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF962 PF06127.11 NODE_58777_length_284_cov_3.325301_g50838_i0forward_frame_3 - 0.34 11.0 6.5 0.57 10.3 6.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF962) FA_desaturase PF00487.24 NODE_58777_length_284_cov_3.325301_g50838_i0forward_frame_3 - 0.57 10.0 3.1 0.63 9.8 3.1 1.1 1 0 0 1 1 1 0 Fatty acid desaturase DUF2207 PF09972.9 NODE_58777_length_284_cov_3.325301_g50838_i0forward_frame_3 - 1.6 7.4 8.8 1.8 7.2 8.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Complex1_30kDa PF00329.19 NODE_58775_length_284_cov_3.417671_g50836_i0forward_frame_3 - 5.3e-17 62.6 0.0 5.6e-17 62.5 0.0 1.0 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DUF1979 PF09322.10 NODE_58775_length_284_cov_3.417671_g50836_i0forward_frame_2 - 0.072 13.0 0.2 0.1 12.5 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1979) Torus PF16131.5 NODE_58774_length_284_cov_4.028112_g50835_i0reverse_frame_2 - 0.93 10.2 8.6 0.26 12.0 4.7 1.9 1 1 1 2 2 2 0 Torus domain Orthopox_A36R PF05950.11 NODE_58772_length_284_cov_7.144578_g50833_i0forward_frame_3 - 0.075 13.2 0.0 0.079 13.1 0.0 1.2 1 0 0 1 1 1 0 Orthopoxvirus A36R protein DUF1356 PF07092.12 NODE_58772_length_284_cov_7.144578_g50833_i0forward_frame_2 - 0.048 12.9 0.0 0.073 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) zf-LITAF-like PF10601.9 NODE_58771_length_284_cov_8.353414_g50832_i0reverse_frame_2 - 3.1e-06 27.3 15.5 4.6e-06 26.8 15.5 1.3 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Syja_N PF02383.18 NODE_58769_length_284_cov_38.409639_g50830_i0forward_frame_3 - 1.7e-14 53.8 0.8 2e-14 53.7 0.8 1.0 1 0 0 1 1 1 1 SacI homology domain Meiosis_expr PF15163.6 NODE_58769_length_284_cov_38.409639_g50830_i0forward_frame_3 - 0.012 16.3 2.8 0.015 16.0 2.7 1.4 1 1 0 1 1 1 0 Meiosis-expressed RPM2 PF08579.11 NODE_58769_length_284_cov_38.409639_g50830_i0forward_frame_3 - 0.021 15.2 0.2 0.029 14.8 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribonuclease P subunit (RPM2) DUF5305 PF17231.2 NODE_58769_length_284_cov_38.409639_g50830_i0forward_frame_3 - 0.034 13.5 0.2 0.038 13.4 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) TACC_C PF05010.14 NODE_58769_length_284_cov_38.409639_g50830_i0forward_frame_3 - 0.047 13.5 4.2 0.055 13.2 4.2 1.0 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Stomoxyn PF11585.8 NODE_58769_length_284_cov_38.409639_g50830_i0forward_frame_3 - 0.17 11.9 1.2 0.47 10.5 0.3 2.0 2 0 0 2 2 2 0 Insect antimicrobial peptide, stomoxyn Ldl_recept_a PF00057.18 NODE_58768_length_284_cov_39.192771_g50829_i0forward_frame_3 - 0.26 11.5 1.0 0.65 10.3 0.1 1.8 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A NDUFV3 PF15880.5 NODE_58767_length_284_cov_39.570281_g50828_i0reverse_frame_2 - 0.053 13.5 0.5 0.75 9.9 0.1 2.2 2 0 0 2 2 2 0 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial FtsJ PF01728.19 NODE_58763_length_284_cov_49.658635_g50824_i0reverse_frame_2 - 0.28 11.3 1.8 0.32 11.1 1.8 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Serpulina_VSP PF05540.11 NODE_58763_length_284_cov_49.658635_g50824_i0forward_frame_3 - 0.021 13.9 0.1 0.023 13.8 0.1 1.0 1 0 0 1 1 1 0 Serpulina hyodysenteriae variable surface protein HTH_21 PF13276.6 NODE_58757_length_284_cov_69.100402_g50818_i0reverse_frame_2 - 0.036 14.2 0.0 0.082 13.1 0.0 1.5 1 0 0 1 1 1 0 HTH-like domain DUF2883 PF11097.8 NODE_58756_length_284_cov_70.257028_g50817_i0forward_frame_3 - 0.0059 16.7 0.1 0.019 15.1 0.0 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF2883) Spem1 PF15670.5 NODE_58755_length_284_cov_74.261044_g50816_i0forward_frame_3 - 0.91 9.0 4.0 1 8.9 4.0 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 Vma12 PF11712.8 NODE_58754_length_284_cov_75.281124_g50815_i0forward_frame_3 - 0.14 12.2 0.1 0.18 11.9 0.1 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Porph_ging PF09697.10 NODE_58752_length_284_cov_79.405622_g50813_i0forward_frame_2 - 0.17 12.4 0.0 0.22 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (Porph_ging) PARP PF00644.20 NODE_58747_length_284_cov_93.751004_g50808_i0forward_frame_3 - 2e-11 43.9 0.0 2.7e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain F-box PF00646.33 NODE_58740_length_284_cov_170.140562_g50801_i0forward_frame_3 - 0.056 13.3 2.2 0.25 11.3 0.1 2.5 3 0 0 3 3 3 0 F-box domain ImpA_N PF06812.12 NODE_58739_length_284_cov_172.168675_g50800_i0reverse_frame_2 - 0.17 12.0 0.0 0.31 11.2 0.0 1.4 2 0 0 2 2 2 0 ImpA, N-terminal, type VI secretion system TMEM251 PF15190.6 NODE_58735_length_284_cov_184.530120_g50796_i0forward_frame_2 - 0.2 11.6 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 Transmembrane protein 251 DnaJ_CXXCXGXG PF00684.19 NODE_58730_length_284_cov_12723.112450_g50791_i0reverse_frame_2 - 0.58 10.6 9.1 1.4 9.3 0.8 2.2 1 1 0 2 2 2 0 DnaJ central domain Ytca PF17090.5 NODE_58725_length_285_cov_1.324000_g50786_i0forward_frame_3 - 0.1 13.1 0.7 0.31 11.6 0.0 1.9 2 0 0 2 2 2 0 Uncharacterised protein family C_LFY_FLO PF17538.2 NODE_58724_length_285_cov_1.340000_g50785_i0reverse_frame_2 - 0.0081 15.7 0.5 0.0086 15.6 0.5 1.1 1 0 0 1 1 1 1 DNA Binding Domain (C-terminal) Leafy/Floricaula PH_17 PF18012.1 NODE_58724_length_285_cov_1.340000_g50785_i0reverse_frame_2 - 1.5 8.6 7.1 1.7 8.5 3.2 2.3 1 1 1 2 2 2 0 PH domain Acyltransferase PF01553.21 NODE_58724_length_285_cov_1.340000_g50785_i0forward_frame_3 - 0.041 13.5 0.1 0.055 13.1 0.1 1.2 1 0 0 1 1 1 0 Acyltransferase AWS PF17907.1 NODE_58724_length_285_cov_1.340000_g50785_i0forward_frame_2 - 0.038 14.0 0.5 0.038 14.0 0.5 1.6 2 0 0 2 2 2 0 AWS domain Cornifin PF02389.15 NODE_58721_length_285_cov_1.376000_g50782_i0reverse_frame_2 - 1e-05 25.7 18.8 1.4e-05 25.3 18.8 1.2 1 0 0 1 1 1 1 Cornifin (SPRR) family MmgE_PrpD PF03972.14 NODE_58721_length_285_cov_1.376000_g50782_i0forward_frame_2 - 0.14 10.7 0.0 0.14 10.6 0.0 1.1 1 0 0 1 1 1 0 MmgE/PrpD family Antimicrobial_6 PF08036.11 NODE_58721_length_285_cov_1.376000_g50782_i0forward_frame_2 - 8 6.6 6.1 25 5.0 0.8 3.2 3 1 0 3 3 3 0 Diapausin family of antimicrobial peptide DUF2791 PF10923.8 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.0081 15.0 1.5 0.0095 14.8 1.5 1.1 1 0 0 1 1 1 1 P-loop Domain of unknown function (DUF2791) KinB_sensor PF16767.5 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.011 16.2 2.0 0.013 16.0 2.0 1.1 1 0 0 1 1 1 0 Sensor domain of alginate biosynthesis sensor protein KinB NAD_binding_5 PF07994.12 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.047 13.1 3.5 0.048 13.0 3.5 1.1 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase HalX PF08663.10 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.049 13.9 0.4 1.1 9.6 0.0 2.1 1 1 0 2 2 2 0 HalX domain DASH_Dad3 PF08656.10 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.19 11.8 2.6 1.3 9.2 0.1 2.1 1 1 1 2 2 2 0 DASH complex subunit Dad3 Fib_alpha PF08702.10 NODE_58719_length_285_cov_1.432000_g50780_i0reverse_frame_2 - 0.7 10.1 7.8 0.75 10.0 7.8 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2721 PF11026.8 NODE_58717_length_285_cov_1.480000_g50778_i0reverse_frame_2 - 1 9.3 4.3 0.2 11.5 0.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) BRAP2 PF07576.12 NODE_58715_length_285_cov_1.532000_g50776_i0forward_frame_3 - 0.027 14.7 0.3 0.045 14.0 0.2 1.7 1 1 0 1 1 1 0 BRCA1-associated protein 2 zf-RING_UBOX PF13445.6 NODE_58714_length_285_cov_1.540000_g50775_i0reverse_frame_2 - 0.047 13.7 0.1 0.096 12.7 0.1 1.6 1 0 0 1 1 1 0 RING-type zinc-finger Retinal PF15449.6 NODE_58714_length_285_cov_1.540000_g50775_i0reverse_frame_2 - 0.083 10.7 2.2 0.095 10.5 2.2 1.0 1 0 0 1 1 1 0 Retinal protein zf-RVT PF13966.6 NODE_58713_length_285_cov_1.592000_g50774_i0forward_frame_3 - 0.023 15.4 2.5 0.023 15.4 1.8 1.3 1 1 0 1 1 1 0 zinc-binding in reverse transcriptase Peptidase_C2 PF00648.21 NODE_58712_length_285_cov_1.592000_g50773_i0reverse_frame_2 - 0.00043 19.4 0.0 0.00047 19.3 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease DZR PF12773.7 NODE_58711_length_285_cov_1.592000_g50772_i0forward_frame_2 - 0.015 15.3 0.6 0.022 14.8 0.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon Phage_ASH PF10554.9 NODE_58710_length_285_cov_1.596000_g50771_i0forward_frame_3 - 0.12 12.7 0.2 0.16 12.3 0.2 1.2 1 0 0 1 1 1 0 Ash protein family DUF951 PF06107.11 NODE_58709_length_285_cov_1.648000_g50770_i0reverse_frame_3 - 0.099 12.6 0.1 0.31 11.0 0.0 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) Cytochrom_B_C PF00032.17 NODE_58709_length_285_cov_1.648000_g50770_i0reverse_frame_2 - 0.032 14.5 0.3 0.041 14.2 0.3 1.1 1 0 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD CopK PF11525.8 NODE_58702_length_285_cov_1.768000_g50763_i0reverse_frame_2 - 0.065 12.9 0.1 0.096 12.3 0.1 1.3 1 0 0 1 1 1 0 Copper resistance protein K ZZ PF00569.17 NODE_58699_length_285_cov_1.800000_g50760_i0forward_frame_2 - 0.098 12.5 0.7 0.16 11.8 0.7 1.3 1 0 0 1 1 1 0 Zinc finger, ZZ type YajC PF02699.15 NODE_58696_length_285_cov_1.880000_g50757_i0reverse_frame_3 - 0.19 11.6 1.6 0.56 10.1 0.0 2.1 2 0 0 2 2 2 0 Preprotein translocase subunit Xlink PF00193.17 NODE_58696_length_285_cov_1.880000_g50757_i0reverse_frame_2 - 0.03 14.7 0.9 0.031 14.7 0.9 1.2 1 0 0 1 1 1 0 Extracellular link domain zf-RING_2 PF13639.6 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 2.7e-09 37.2 8.4 4.1e-09 36.6 8.4 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 3.9e-07 29.7 11.5 7.8e-07 28.7 11.5 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 2.4e-06 27.7 5.1 4.7e-06 26.8 5.1 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.0017 18.2 8.2 0.0024 17.7 8.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.0018 18.4 5.7 0.0032 17.6 5.7 1.4 1 0 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.0028 17.5 7.3 0.0042 16.9 7.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.0058 16.6 8.0 0.0082 16.1 8.0 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.0061 16.6 6.1 0.0069 16.4 6.1 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.0086 15.7 6.2 0.012 15.2 6.2 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 NODE_58691_length_285_cov_1.956000_g50752_i0forward_frame_3 - 0.072 13.2 6.0 0.17 12.0 6.0 1.7 1 1 0 1 1 1 0 RING-variant domain Phage_Gp17 PF17549.2 NODE_58690_length_285_cov_1.968000_g50751_i0forward_frame_2 - 0.023 14.7 0.4 0.033 14.2 0.4 1.4 1 1 0 1 1 1 0 Gene Product 17 Methuselah_N PF06652.12 NODE_58684_length_285_cov_2.032000_g50745_i0forward_frame_3 - 0.067 13.1 1.7 0.087 12.7 1.7 1.1 1 0 0 1 1 1 0 Methuselah N-terminus Vps26 PF03643.15 NODE_58683_length_285_cov_2.040000_g50744_i0reverse_frame_2 - 0.023 13.7 0.1 0.028 13.4 0.1 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 26 cNMP_binding PF00027.29 NODE_58682_length_285_cov_2.048000_g50743_i0forward_frame_2 - 0.0011 18.9 0.0 0.0014 18.7 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain ATP13 PF12921.7 NODE_58677_length_285_cov_2.116000_g50738_i0reverse_frame_2 - 0.14 12.0 0.2 9.4 6.1 0.1 2.3 1 1 1 2 2 2 0 Mitochondrial ATPase expression Ribophorin_II PF05817.14 NODE_58677_length_285_cov_2.116000_g50738_i0reverse_frame_2 - 0.5 8.9 2.3 0.65 8.5 2.3 1.1 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II TetR_C_16 PF17920.1 NODE_58676_length_285_cov_2.168000_g50737_i0forward_frame_2 - 0.064 13.5 0.1 0.26 11.5 0.0 1.8 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DNA_pol_B_exo1 PF03104.19 NODE_58669_length_285_cov_2.356000_g50730_i0reverse_frame_2 - 1.7e-10 40.6 0.3 1.8e-10 40.5 0.3 1.0 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain AA_permease PF00324.21 NODE_58668_length_285_cov_2.356000_g50729_i0forward_frame_2 - 2.6e-15 56.0 5.0 3e-15 55.8 5.0 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_58668_length_285_cov_2.356000_g50729_i0forward_frame_2 - 0.00014 20.8 6.8 0.00016 20.7 6.8 1.0 1 0 0 1 1 1 1 Amino acid permease LapA_dom PF06305.11 NODE_58668_length_285_cov_2.356000_g50729_i0forward_frame_2 - 5.6 6.9 8.6 0.99 9.3 2.8 2.4 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Trans_reg_C PF00486.28 NODE_58666_length_285_cov_2.444000_g50727_i0forward_frame_3 - 1.5e-05 24.9 0.0 6.8e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 NODE_58666_length_285_cov_2.444000_g50727_i0forward_frame_3 - 0.00017 21.7 0.0 0.0003 20.9 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks284.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks284.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks284.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks284.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF444 PF04285.12 NODE_58664_length_285_cov_2.504000_g50725_i0reverse_frame_2 - 2.7e-29 102.5 1.2 2.9e-29 102.4 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF444) Leader_Thr PF08254.11 NODE_58660_length_285_cov_2.660000_g50721_i0reverse_frame_2 - 0.058 13.1 0.6 0.13 12.0 0.6 1.6 1 0 0 1 1 1 0 Threonine leader peptide DUF4517 PF15006.6 NODE_58660_length_285_cov_2.660000_g50721_i0forward_frame_3 - 0.047 13.8 0.1 0.049 13.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4517) AmoC PF04896.12 NODE_58660_length_285_cov_2.660000_g50721_i0forward_frame_3 - 0.057 12.7 0.3 0.064 12.5 0.3 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C SRP72 PF08492.12 NODE_58656_length_285_cov_2.820000_g50717_i0reverse_frame_3 - 0.031 14.7 0.4 0.065 13.7 0.1 1.8 2 0 0 2 2 2 0 SRP72 RNA-binding domain Herpes_IE68 PF02479.16 NODE_58654_length_285_cov_2.900000_g50715_i0forward_frame_2 - 0.024 14.2 0.0 0.03 13.9 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus immediate early protein RasGAP PF00616.19 NODE_58653_length_285_cov_2.904000_g50714_i0reverse_frame_2 - 0.011 15.4 1.1 0.013 15.3 1.1 1.1 1 0 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase FxsA PF04186.13 NODE_58645_length_285_cov_3.084000_g50706_i0forward_frame_2 - 2.5e-15 56.5 2.2 3.1e-15 56.2 2.2 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein DDE_Tnp_1 PF01609.21 NODE_58643_length_285_cov_3.148000_g50704_i0reverse_frame_2 - 2e-08 34.1 0.0 2.5e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_assoc PF13808.6 NODE_58643_length_285_cov_3.148000_g50704_i0reverse_frame_2 - 0.00087 19.3 0.1 0.0013 18.7 0.1 1.3 1 0 0 1 1 1 1 DDE_Tnp_1-associated DUF374 PF04028.13 NODE_58643_length_285_cov_3.148000_g50704_i0reverse_frame_2 - 0.0045 16.5 0.3 0.01 15.4 0.3 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF374) P22_Tail-4 PF11650.8 NODE_58643_length_285_cov_3.148000_g50704_i0reverse_frame_2 - 0.17 11.8 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 P22 tail accessory factor PAG PF15347.6 NODE_58640_length_285_cov_4.556000_g50701_i0forward_frame_3 - 3.1 6.7 3.3 3.7 6.4 3.3 1.0 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched MiAMP1 PF09117.10 NODE_58639_length_285_cov_5.316000_g50700_i0reverse_frame_2 - 0.078 13.2 0.5 0.31 11.3 0.5 1.9 1 1 0 1 1 1 0 MiAMP1 DUF1187 PF06688.11 NODE_58639_length_285_cov_5.316000_g50700_i0reverse_frame_2 - 0.093 13.1 0.2 0.18 12.2 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1187) CotH PF08757.11 NODE_58634_length_285_cov_36.356000_g50695_i0reverse_frame_2 - 0.072 12.6 0.5 0.097 12.2 0.5 1.1 1 0 0 1 1 1 0 CotH kinase protein DUF645 PF04875.12 NODE_58633_length_285_cov_40.404000_g50694_i0reverse_frame_2 - 0.11 12.6 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF645 DUF2628 PF10947.8 NODE_58633_length_285_cov_40.404000_g50694_i0forward_frame_2 - 0.15 12.4 3.9 0.18 12.2 3.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Transpos_assoc PF13963.6 NODE_58628_length_285_cov_49.020000_g50689_i0reverse_frame_2 - 0.019 15.3 0.1 0.03 14.6 0.1 1.3 1 0 0 1 1 1 0 Transposase-associated domain zn-ribbon_14 PF16503.5 NODE_58625_length_285_cov_56.768000_g50686_i0reverse_frame_3 - 2.2 7.8 6.0 1.3 8.6 3.1 2.1 2 1 1 3 3 3 0 Zinc-ribbon SRP40_C PF05022.12 NODE_58625_length_285_cov_56.768000_g50686_i0forward_frame_3 - 1.9 9.4 0.0 1.9 9.4 0.0 2.2 2 0 0 2 2 2 0 SRP40, C-terminal domain Ribosomal_L6e_N PF03868.15 NODE_58625_length_285_cov_56.768000_g50686_i0forward_frame_2 - 0.59 10.4 8.4 2.3 8.5 8.4 1.8 1 1 0 1 1 1 0 Ribosomal protein L6, N-terminal domain Bowman-Birk_leg PF00228.20 NODE_58624_length_285_cov_62.196000_g50685_i0reverse_frame_2 - 0.16 12.4 0.8 0.16 12.4 0.8 2.0 2 0 0 2 2 2 0 Bowman-Birk serine protease inhibitor family zf-CHY PF05495.12 NODE_58620_length_285_cov_68.320000_g50681_i0reverse_frame_3 - 0.0036 17.8 0.4 0.006 17.0 0.4 1.4 1 1 0 1 1 1 1 CHY zinc finger Adeno_E1A PF02703.14 NODE_58620_length_285_cov_68.320000_g50681_i0reverse_frame_3 - 0.099 12.2 0.3 0.1 12.2 0.3 1.0 1 0 0 1 1 1 0 Early E1A protein DUF2116 PF09889.9 NODE_58620_length_285_cov_68.320000_g50681_i0reverse_frame_3 - 1 9.4 4.0 0.49 10.4 0.6 2.2 1 1 1 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) PIH1_CS PF18201.1 NODE_58617_length_285_cov_78.056000_g50678_i0reverse_frame_3 - 2.9e-07 30.8 0.0 1.1e-06 29.0 0.0 1.7 2 0 0 2 2 2 1 PIH1 CS-like domain DUF417 PF04224.12 NODE_58617_length_285_cov_78.056000_g50678_i0forward_frame_3 - 0.11 12.0 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF417 PH_15 PF17339.2 NODE_58614_length_285_cov_89.452000_g50675_i0reverse_frame_2 - 0.16 11.9 0.1 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 PH domain IGFL PF14653.6 NODE_58613_length_285_cov_90.552000_g50674_i0reverse_frame_2 - 0.01 15.7 0.6 0.01 15.7 0.6 1.5 2 0 0 2 2 2 0 Insulin growth factor-like family DEC-1_N PF04625.13 NODE_58612_length_285_cov_92.456000_g50673_i0forward_frame_3 - 0.12 11.4 0.0 0.14 11.2 0.0 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Tektin PF03148.14 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 2e-05 23.5 8.8 2.4e-05 23.3 8.8 1.0 1 0 0 1 1 1 1 Tektin family Angiomotin_C PF12240.8 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.0039 16.8 3.7 0.0039 16.8 3.7 1.8 1 1 1 2 2 2 1 Angiomotin C terminal Phage_Mu_Gam PF07352.12 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.027 14.4 8.6 0.039 13.9 4.8 2.0 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein Flagellar_rod PF05149.12 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.14 11.6 9.1 0.16 11.4 9.1 1.0 1 0 0 1 1 1 0 Paraflagellar rod protein UPF0242 PF06785.11 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.45 10.6 10.1 0.55 10.3 10.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CENP-H PF05837.12 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 0.87 10.0 8.9 0.55 10.7 5.6 1.9 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Atg14 PF10186.9 NODE_58611_length_285_cov_96.256000_g50672_i0reverse_frame_2 - 3.6 6.6 11.2 4.5 6.3 11.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 zf-CHY PF05495.12 NODE_58605_length_285_cov_132.148000_g50666_i0forward_frame_2 - 0.14 12.6 6.1 0.19 12.2 6.1 1.3 1 1 0 1 1 1 0 CHY zinc finger DUF2628 PF10947.8 NODE_58604_length_285_cov_141.192000_g50665_i0forward_frame_3 - 3.6 8.0 8.8 5.1 7.5 8.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) EF-hand_8 PF13833.6 NODE_58603_length_285_cov_157.252000_g50664_i0reverse_frame_3 - 0.0084 15.9 0.9 0.013 15.3 0.9 1.3 1 0 0 1 1 1 1 EF-hand domain pair Herpes_UL92 PF03048.14 NODE_58603_length_285_cov_157.252000_g50664_i0reverse_frame_3 - 0.14 11.9 1.8 0.19 11.5 1.3 1.4 1 1 0 1 1 1 0 UL92 family G_path_suppress PF15991.5 NODE_58600_length_285_cov_186.936000_g50661_i0forward_frame_3 - 0.12 12.5 0.6 0.14 12.2 0.6 1.0 1 0 0 1 1 1 0 G-protein pathway suppressor DUF4263 PF14082.6 NODE_58595_length_285_cov_324.984000_g50656_i0reverse_frame_3 - 0.044 14.0 0.0 0.054 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4263) Dynein_AAA_lid PF17852.1 NODE_58594_length_285_cov_328.332000_g50655_i0reverse_frame_2 - 1 9.5 3.0 1.2 9.2 3.0 1.2 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain MOZART2 PF12926.7 NODE_58594_length_285_cov_328.332000_g50655_i0reverse_frame_2 - 1.5 8.4 4.4 1.4 8.6 0.7 2.0 1 1 1 2 2 2 0 Mitotic-spindle organizing gamma-tubulin ring associated DUF4097 PF13349.6 NODE_58594_length_285_cov_328.332000_g50655_i0forward_frame_2 - 0.15 11.4 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 Putative adhesin YrhK PF14145.6 NODE_58594_length_285_cov_328.332000_g50655_i0forward_frame_2 - 1.4 8.9 12.1 3.2e+02 1.3 12.1 3.6 1 1 0 1 1 1 0 YrhK-like protein YadA_head PF05658.14 NODE_58594_length_285_cov_328.332000_g50655_i0forward_frame_2 - 1.6 9.2 18.1 26 5.4 1.4 5.6 2 1 1 4 4 4 0 Head domain of trimeric autotransporter adhesin S1FA PF04689.13 ORF97873 - 5.8 7.1 6.4 0.45 10.7 1.7 1.5 2 0 0 2 2 2 0 DNA binding protein S1FA AFP PF02420.15 ORF97807 - 0.58 10.7 0.4 0.58 10.7 0.4 3.9 4 0 0 4 4 4 0 Insect antifreeze protein repeat LYTB PF02401.18 ORF97490 - 0.0016 17.7 0.5 0.0016 17.7 0.5 1.0 1 0 0 1 1 1 1 LytB protein SCIMP PF15050.6 ORF97490 - 0.019 15.4 0.1 0.022 15.2 0.1 1.2 1 0 0 1 1 1 0 SCIMP protein NOB1_Zn_bind PF08772.11 ORF97490 - 0.089 13.0 1.5 0.11 12.7 0.7 1.5 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like CRISPR_Cse1 PF09481.10 ORF97203 - 0.053 12.6 0.0 0.053 12.6 0.0 1.0 1 0 0 1 1 1 0 CRISPR-associated protein Cse1 (CRISPR_cse1) Trypsin_2 PF13365.6 ORF96884 - 0.046 14.6 0.2 0.064 14.1 0.2 1.4 1 1 0 1 1 1 0 Trypsin-like peptidase domain Voldacs PF03517.13 ORF95614 - 0.06 13.5 0.0 0.075 13.1 0.0 1.1 1 0 0 1 1 1 0 Regulator of volume decrease after cellular swelling BNR_2 PF13088.6 ORF95352 - 0.077 12.3 0.9 0.08 12.2 0.9 1.1 1 0 0 1 1 1 0 BNR repeat-like domain DUF5318 PF17249.2 ORF94736 - 0.053 13.3 0.2 0.082 12.7 0.0 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5318) S4_2 PF13275.6 ORF93338 - 0.051 13.4 0.0 0.064 13.1 0.0 1.2 1 0 0 1 1 1 0 S4 domain Cobl PF09469.10 ORF92857 - 0.052 13.8 0.8 0.12 12.7 0.4 1.7 2 0 0 2 2 2 0 Cordon-bleu ubiquitin-like domain TPR_10 PF13374.6 ORF92347 - 2.2e-09 36.9 0.1 1.2e-05 25.0 0.0 2.3 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF92347 - 4.7e-09 36.4 0.2 6.6e-09 35.9 0.2 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF92347 - 0.0036 17.2 0.3 0.18 11.9 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF92347 - 0.0074 16.3 0.2 0.071 13.3 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF92347 - 0.013 15.7 0.2 0.34 11.2 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF92347 - 0.026 14.4 0.1 0.55 10.1 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF92347 - 0.061 14.2 1.5 0.3 12.0 0.0 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat SseC PF04888.12 ORF92207 - 1.5 8.4 11.3 1.7 8.2 11.3 1.1 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family DUF3783 PF12646.7 ORF91927 - 0.054 13.5 0.1 0.074 13.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3783) TPR_2 PF07719.17 ORF90873 - 2.7e-11 42.7 0.0 4.5e-05 23.3 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF90873 - 5.1e-10 38.7 0.1 3.9e-05 23.3 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF90873 - 2e-07 30.7 0.2 0.00062 19.8 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF90873 - 8.5e-07 29.2 0.0 0.0064 16.8 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF90873 - 1.2e-06 28.1 0.1 4.3e-06 26.3 0.0 1.8 1 1 1 2 2 2 1 TPR repeat TPR_16 PF13432.6 ORF90873 - 2.8e-06 27.9 0.0 3.6e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF90873 - 3.1e-06 27.5 0.0 0.00011 22.7 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF90873 - 2.1e-05 24.2 0.0 0.038 13.9 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF90873 - 4.6e-05 23.8 0.5 0.076 13.7 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF90873 - 6.3e-05 23.1 0.1 0.00095 19.4 0.0 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat NARP1 PF12569.8 ORF90873 - 9.4e-05 21.5 0.2 0.00011 21.2 0.1 1.2 1 1 0 1 1 1 1 NMDA receptor-regulated protein 1 TPR_19 PF14559.6 ORF90873 - 0.0001 22.7 0.0 0.00017 22.0 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF90873 - 0.00027 20.9 1.2 0.0025 17.8 0.1 2.2 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 ORF90873 - 0.002 18.0 0.0 0.31 11.2 0.0 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF90873 - 0.007 16.6 0.1 0.012 15.8 0.1 1.3 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 SRP_TPR_like PF17004.5 ORF90873 - 0.0092 16.0 0.8 0.014 15.4 0.8 1.3 1 1 0 1 1 1 1 Putative TPR-like repeat TPR_9 PF13371.6 ORF90873 - 0.026 14.7 0.0 0.029 14.5 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF627 PF04781.12 ORF90873 - 0.032 14.2 0.1 0.27 11.3 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF627) FIVAR PF07554.13 ORF90873 - 0.051 14.4 0.7 0.43 11.4 0.2 2.0 2 0 0 2 2 2 0 FIVAR domain ketoacyl-synt PF00109.26 ORF90456 - 0.043 13.4 0.0 0.047 13.3 0.0 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain DUF2671 PF10877.8 ORF90456 - 0.092 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) SLR1-BP PF07333.12 ORF90422 - 0.013 15.9 3.3 0.018 15.5 3.3 1.2 1 0 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Tom6 PF17112.5 ORF90422 - 0.12 11.9 0.2 0.19 11.3 0.2 1.3 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom6, fungal RSN1_TM PF13967.6 ORF9020 - 0.007 16.1 0.1 0.0088 15.8 0.1 1.3 1 1 0 1 1 1 1 Late exocytosis, associated with Golgi transport DUF4131 PF13567.6 ORF90022 - 0.28 10.8 3.0 0.28 10.8 2.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) Wzy_C PF04932.15 ORF90022 - 0.82 9.3 3.1 0.97 9.0 3.1 1.2 1 0 0 1 1 1 0 O-Antigen ligase DUF2830 PF11125.8 ORF89889 - 0.04 13.9 0.9 0.057 13.4 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2830) vMSA PF00695.19 ORF89889 - 0.043 12.9 2.1 0.049 12.7 2.1 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Mitoc_L55 PF09776.9 ORF89743 - 0.17 11.6 0.1 0.23 11.2 0.1 1.3 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L55 MyTH4 PF00784.17 ORF88927 - 1.9 9.0 6.5 1 9.9 0.8 2.1 2 0 0 2 2 2 0 MyTH4 domain ECSCR PF15820.5 ORF8875 - 0.2 11.5 0.1 0.29 11.0 0.1 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator ABC2_membrane_2 PF12679.7 ORF88069 - 0.88 8.8 7.1 1 8.6 7.1 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein p31comet PF06581.12 ORF87586 - 0.05 12.8 0.1 0.061 12.5 0.1 1.1 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding FRG2 PF15315.6 ORF87147 - 0.034 14.3 6.1 0.042 14.1 6.1 1.1 1 0 0 1 1 1 0 Facioscapulohumeral muscular dystrophy candidate 2 Pap_E4 PF02711.14 ORF87147 - 0.095 13.7 0.5 0.11 13.4 0.5 1.1 1 0 0 1 1 1 0 E4 protein DUF5466 PF17554.2 ORF87147 - 1.2 9.4 6.3 0.78 10.0 4.1 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5466) SAC3_GANP PF03399.16 ORF87035 - 0.045 13.1 0.1 0.045 13.1 0.1 1.1 1 0 0 1 1 1 0 SAC3/GANP family DUF1489 PF07370.11 ORF86408 - 0.12 12.1 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1489) Ala_racemase_N PF01168.20 ORF85951 - 0.014 15.0 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Alanine racemase, N-terminal domain THB PF18362.1 ORF84764 - 0.11 12.1 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Tri-helix bundle domain MttA_Hcf106 PF02416.16 ORF84175 - 0.12 11.7 0.1 0.19 11.1 0.1 1.2 1 0 0 1 1 1 0 mttA/Hcf106 family Viral_Rep PF02407.16 ORF83511 - 0.083 13.2 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Putative viral replication protein PLDc_N PF13396.6 ORF8172 - 0.11 12.4 0.1 0.17 11.9 0.1 1.3 1 0 0 1 1 1 0 Phospholipase_D-nuclease N-terminal SecD-TM1 PF13721.6 ORF79912 - 0.17 12.4 0.2 0.21 12.1 0.2 1.2 1 0 0 1 1 1 0 SecD export protein N-terminal TM region MDM31_MDM32 PF08118.11 ORF78956 - 0.078 11.6 0.5 0.09 11.4 0.5 1.0 1 0 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins Kdo_hydroxy PF11004.8 ORF78140 - 0.1 11.8 0.1 0.1 11.8 0.1 1.1 1 0 0 1 1 1 0 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase DUF2830 PF11125.8 ORF78131 - 0.04 13.9 0.9 0.057 13.4 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2830) vMSA PF00695.19 ORF78131 - 0.043 12.9 2.1 0.049 12.7 2.1 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF4352 PF11611.8 ORF77045 - 0.026 14.8 0.6 0.026 14.8 0.6 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4352) Abhydrolase_4 PF08386.10 ORF76424 - 0.047 13.8 0.1 0.059 13.5 0.1 1.3 1 1 0 1 1 1 0 TAP-like protein ShK PF01549.24 ORF76174 - 0.73 10.4 4.5 1.5 9.4 0.6 2.8 3 0 0 3 3 3 0 ShK domain-like RSN1_TM PF13967.6 ORF75884 - 0.007 16.1 0.1 0.0088 15.8 0.1 1.3 1 1 0 1 1 1 1 Late exocytosis, associated with Golgi transport Trp_leader2 PF08056.11 ORF75511 - 0.026 14.5 0.9 0.026 14.5 0.9 1.6 2 0 0 2 2 2 0 Tryptophan operon leader peptide HATPase_c PF02518.26 ORF75011 - 0.00058 20.3 0.0 0.00093 19.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ATP-grasp_4 PF13535.6 ORF75011 - 0.073 12.7 0.0 0.082 12.5 0.0 1.0 1 0 0 1 1 1 0 ATP-grasp domain Fibroin_P25 PF07294.11 ORF74497 - 0.0049 16.9 0.0 0.005 16.9 0.0 1.1 1 0 0 1 1 1 1 Fibroin P25 RCC1 PF00415.18 ORF72324 - 3.1e-07 30.9 0.0 0.027 15.1 0.0 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF72324 - 6.4e-05 22.6 0.3 0.00029 20.5 0.1 1.9 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat Toxin_8 PF07365.12 ORF72268 - 0.18 12.0 0.6 0.18 12.0 0.6 2.7 2 1 0 2 2 2 0 Alpha conotoxin precursor PliI PF16743.5 ORF71828 - 0.087 12.6 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Periplasmic lysozyme inhibitor of I-type lysozyme KH_9 PF17904.1 ORF7166 - 0.049 14.0 0.2 0.067 13.6 0.2 1.2 1 0 0 1 1 1 0 FMRP KH0 domain TRPM_tetra PF16519.5 ORF71216 - 0.052 13.7 1.5 0.072 13.2 1.5 1.2 1 0 0 1 1 1 0 Tetramerisation domain of TRPM LBP_BPI_CETP PF01273.25 ORF70283 - 0.098 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 LBP / BPI / CETP family, N-terminal domain Mito_carr PF00153.27 ORF70133 - 1.4e-08 34.6 0.0 1.7e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein NADHdeh_related PF10125.9 ORF70036 - 0.016 14.5 0.2 0.018 14.4 0.2 1.1 1 0 0 1 1 1 0 NADH dehydrogenase I, subunit N related protein EF-hand_6 PF13405.6 ORF70020 - 1.1e-12 46.8 8.1 1.1e-05 25.0 0.1 3.1 2 1 1 3 3 3 3 EF-hand domain EF-hand_1 PF00036.32 ORF70020 - 1.6e-11 42.9 8.9 4.7e-05 22.6 0.0 3.1 2 1 1 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF70020 - 1.1e-09 38.0 3.2 9.5e-08 31.8 0.2 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF70020 - 4.9e-09 36.5 0.2 4.9e-09 36.5 0.2 1.8 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF70020 - 1.1e-05 24.7 0.3 0.0076 15.7 0.2 3.1 3 1 1 4 4 4 2 EF hand PMBR PF09373.10 ORF70020 - 0.001 19.1 0.1 1.2 9.4 0.0 2.2 2 0 0 2 2 2 2 Pseudomurein-binding repeat Caleosin PF05042.13 ORF70020 - 0.034 14.1 2.0 0.26 11.2 0.1 2.3 1 1 1 2 2 2 0 Caleosin related protein PaaX PF07848.12 ORF70020 - 0.11 12.8 0.0 0.2 11.9 0.0 1.4 1 1 0 1 1 1 0 PaaX-like protein V_cholerae_RfbT PF05575.11 ORF69051 - 0.045 13.0 0.3 0.047 13.0 0.3 1.0 1 0 0 1 1 1 0 Vibrio cholerae RfbT protein 7TM_GPCR_Sru PF10322.9 ORF67190 - 2.4 7.4 6.5 2.6 7.3 6.5 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru PBP1_TM PF14812.6 ORF67190 - 5.3 7.5 7.4 3.2 8.2 5.7 1.5 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Ion_trans PF00520.31 ORF67180 - 0.00012 21.4 3.2 0.00014 21.2 3.2 1.0 1 0 0 1 1 1 1 Ion transport protein Exo84_C PF16528.5 ORF67180 - 0.00049 20.0 0.2 0.00061 19.7 0.2 1.1 1 0 0 1 1 1 1 Exocyst component 84 C-terminal DUF3990 PF13151.6 ORF6586 - 0.16 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3990) HILPDA PF15220.6 ORF65773 - 0.16 12.1 0.2 0.3 11.3 0.2 1.5 1 0 0 1 1 1 0 Hypoxia-inducible lipid droplet-associated FeS PF04060.13 ORF65382 - 0.51 10.0 3.7 3.6 7.3 0.2 2.9 3 0 0 3 3 3 0 Putative Fe-S cluster Tat PF00539.18 ORF65125 - 0.69 10.1 3.5 0.54 10.5 1.0 1.9 2 0 0 2 2 2 0 Transactivating regulatory protein (Tat) Pdase_C33_assoc PF14756.6 ORF64866 - 0.011 15.7 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase_C33-associated domain Filament_head PF04732.14 ORF64081 - 0.78 10.7 5.3 2.8 8.9 5.3 1.8 1 1 0 1 1 1 0 Intermediate filament head (DNA binding) region DUF4441 PF14536.6 ORF62426 - 0.023 14.9 0.7 0.034 14.3 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) DUF4219 PF13961.6 ORF62082 - 0.31 10.8 3.2 4.5 7.0 0.7 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4219) Defensin_int PF17858.1 ORF61992 - 0.026 14.5 2.2 0.045 13.7 2.2 1.4 1 0 0 1 1 1 0 Platypus intermediate defensin-like peptide DUF4389 PF14333.6 ORF6174 - 0.15 12.0 4.1 0.14 12.0 0.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) DUF5553 PF17707.1 ORF6147 - 1.2 8.6 6.0 0.081 12.4 1.6 1.4 2 0 0 2 2 2 0 Family of unknown function (DUF5553) DUF4834 PF16118.5 ORF6147 - 1.6 9.7 5.1 17 6.5 1.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Bac_export_2 PF01312.19 ORF59861 - 0.46 9.7 3.3 0.53 9.4 3.3 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family PelG PF16933.5 ORF58367 - 0.11 11.4 9.3 0.11 11.3 9.3 1.0 1 0 0 1 1 1 0 Putative exopolysaccharide Exporter (EPS-E) Alpha-E PF04168.12 ORF58296 - 0.073 12.9 0.1 0.093 12.5 0.1 1.0 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. DUF3440 PF11922.8 ORF58289 - 0.028 14.1 0.2 0.03 14.0 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) TraL PF07178.11 ORF57461 - 0.013 15.9 0.2 0.025 15.0 0.1 1.5 1 1 0 1 1 1 0 TraL protein Chitin_synth_2 PF03142.15 ORF57461 - 0.18 10.4 0.4 0.21 10.1 0.4 1.0 1 0 0 1 1 1 0 Chitin synthase Kelch_6 PF13964.6 ORF56206 - 0.0018 18.5 0.1 0.0039 17.4 0.1 1.7 1 1 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 ORF56206 - 0.025 14.6 0.0 0.048 13.7 0.0 1.5 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF56206 - 0.038 14.0 0.1 0.083 12.9 0.1 1.6 1 0 0 1 1 1 0 Kelch motif Kelch_1 PF01344.25 ORF56206 - 0.076 12.6 0.2 0.15 11.7 0.2 1.5 1 0 0 1 1 1 0 Kelch motif DUF4150 PF13665.6 ORF54128 - 0.13 12.4 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4150) Vps8 PF12816.7 ORF54126 - 0.071 12.6 0.3 0.11 12.0 0.2 1.5 1 1 0 1 1 1 0 Golgi CORVET complex core vacuolar protein 8 5-FTHF_cyc-lig PF01812.20 ORF52917 - 3.1e-24 85.8 0.0 3.4e-24 85.7 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family DUF5315 PF17242.2 ORF52826 - 0.21 11.4 2.3 1.2 9.1 0.3 2.1 1 1 1 2 2 2 0 Disordered region of unknown function (DUF5315) MSL2-CXC PF16682.5 ORF52617 - 0.33 11.1 15.4 1.4 9.1 4.1 2.2 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Exo_endo_phos PF03372.23 ORF51690 - 2.3e-05 24.0 0.0 2.6e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Ppnp PF06865.11 ORF49610 - 1.4e-33 115.2 0.0 1.5e-33 115.1 0.0 1.0 1 0 0 1 1 1 1 Pyrimidine/purine nucleoside phosphorylase GPR15L PF15854.5 ORF49260 - 2.9 8.2 7.7 4.5 7.6 7.7 1.6 1 1 0 1 1 1 0 G-protein coupled receptor ligand 15 Carla_C4 PF01623.17 ORF48921 - 0.013 15.4 2.2 0.013 15.4 2.2 1.7 2 0 0 2 2 2 0 Carlavirus putative nucleic acid binding protein DUF5553 PF17707.1 ORF48699 - 1.2 8.6 6.0 0.081 12.4 1.6 1.4 2 0 0 2 2 2 0 Family of unknown function (DUF5553) DUF4834 PF16118.5 ORF48699 - 1.6 9.7 5.1 17 6.5 1.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Cag12 PF13117.6 ORF47950 - 0.18 12.3 0.3 0.28 11.7 0.3 1.3 1 0 0 1 1 1 0 Cag pathogenicity island protein Cag12 SseC PF04888.12 ORF47357 - 1.5 8.4 11.3 1.7 8.2 11.3 1.1 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family IRF PF00605.17 ORF47256 - 0.12 12.6 1.2 0.22 11.9 1.2 1.6 1 1 0 1 1 1 0 Interferon regulatory factor transcription factor DUF4219 PF13961.6 ORF46848 - 0.31 10.8 3.2 4.5 7.0 0.7 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4219) S1FA PF04689.13 ORF46307 - 5.8 7.1 6.4 0.45 10.7 1.7 1.5 2 0 0 2 2 2 0 DNA binding protein S1FA BNR PF02012.20 ORF45634 - 1.3 9.3 3.3 0.62 10.3 0.7 1.9 2 0 0 2 2 2 0 BNR/Asp-box repeat DUF4575 PF15143.6 ORF45574 - 0.048 13.9 0.1 0.057 13.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4575) Cep57_CLD_2 PF14197.6 ORF45161 - 8.2e-05 22.6 5.0 0.012 15.7 0.7 2.1 1 1 1 2 2 2 2 Centrosome localisation domain of PPC89 Taxilin PF09728.9 ORF45161 - 0.0016 17.7 11.6 0.0018 17.5 11.6 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein ADIP PF11559.8 ORF45161 - 0.0034 17.5 11.9 0.0043 17.1 11.9 1.2 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding TolA_bind_tri PF16331.5 ORF45161 - 0.0035 17.4 11.7 0.0054 16.8 11.7 1.5 1 1 0 1 1 1 1 TolA binding protein trimerisation Seryl_tRNA_N PF02403.22 ORF45161 - 0.0058 16.9 7.6 0.0077 16.4 7.6 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Jnk-SapK_ap_N PF09744.9 ORF45161 - 0.0063 16.7 9.3 0.0074 16.5 9.3 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Fib_alpha PF08702.10 ORF45161 - 0.0071 16.5 5.9 0.0071 16.5 5.9 1.8 1 1 1 2 2 2 1 Fibrinogen alpha/beta chain family Spc29 PF17082.5 ORF45161 - 0.011 15.6 5.0 0.014 15.3 5.0 1.2 1 0 0 1 1 1 0 Spindle Pole Component 29 Spc7 PF08317.11 ORF45161 - 0.012 14.5 11.4 0.014 14.3 11.4 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein YabA PF06156.13 ORF45161 - 0.013 16.2 4.6 0.013 16.2 4.6 1.6 1 1 0 1 1 1 0 Initiation control protein YabA ArsC PF03960.15 ORF45161 - 0.013 15.5 1.7 0.025 14.6 0.4 1.9 2 0 0 2 2 2 0 ArsC family DUF3540 PF12059.8 ORF45161 - 0.022 14.6 0.5 0.027 14.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3540) SlyX PF04102.12 ORF45161 - 0.026 15.1 7.5 0.026 15.1 7.5 1.5 2 0 0 2 2 1 0 SlyX CENP-H PF05837.12 ORF45161 - 0.046 14.1 7.4 0.026 14.9 5.6 1.5 1 1 1 2 2 2 0 Centromere protein H (CENP-H) UPF0242 PF06785.11 ORF45161 - 0.065 13.3 13.2 0.088 12.9 13.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF2120 PF09893.9 ORF45161 - 0.09 12.9 3.9 0.12 12.4 1.2 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) DivIC PF04977.15 ORF45161 - 0.091 12.5 7.0 0.038 13.8 4.2 1.8 1 1 1 2 2 2 0 Septum formation initiator HIP1_clath_bdg PF16515.5 ORF45161 - 0.093 13.4 7.9 0.078 13.6 6.2 1.6 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 APG6_N PF17675.1 ORF45161 - 0.13 12.8 12.4 0.14 12.7 12.4 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region SKA2 PF16740.5 ORF45161 - 0.16 11.8 7.5 0.24 11.2 5.9 2.0 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 Rb_C PF08934.10 ORF45161 - 0.18 11.6 2.2 0.2 11.4 2.2 1.0 1 0 0 1 1 1 0 Rb C-terminal domain PKcGMP_CC PF16808.5 ORF45161 - 0.2 11.5 6.3 0.86 9.5 0.9 3.3 1 1 3 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase bZIP_1 PF00170.21 ORF45161 - 0.23 11.6 3.9 0.15 12.2 1.0 2.1 2 1 0 2 2 2 0 bZIP transcription factor BST2 PF16716.5 ORF45161 - 0.26 11.9 9.7 0.39 11.3 9.7 1.3 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 Elf4 PF07011.11 ORF45161 - 0.32 11.0 5.5 0.39 10.7 4.6 1.6 1 1 1 2 2 2 0 Early Flowering 4 domain DUF4407 PF14362.6 ORF45161 - 0.35 10.2 5.9 0.43 9.9 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DASH_Dad1 PF08649.10 ORF45161 - 0.49 10.6 3.6 0.28 11.4 1.0 2.0 2 1 1 3 3 2 0 DASH complex subunit Dad1 TMPIT PF07851.13 ORF45161 - 0.61 9.3 8.3 0.7 9.1 8.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein Tho2 PF11262.8 ORF45161 - 0.64 9.2 8.2 0.73 9.0 8.2 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 UPF0231 PF06062.11 ORF45161 - 0.68 10.2 6.0 2 8.7 0.3 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0231) Csm1_N PF18504.1 ORF45161 - 0.8 10.1 10.3 0.92 9.9 0.8 2.7 1 1 2 3 3 3 0 Csm1 N-terminal domain DUF4446 PF14584.6 ORF45161 - 1 9.3 5.6 2.2 8.3 5.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) DUF948 PF06103.11 ORF45161 - 1.1 9.6 3.9 1.6 9.1 2.6 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Fungal_TACC PF12709.7 ORF45161 - 1.2 9.7 10.1 2.1e+02 2.5 10.1 2.3 1 1 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins Atg14 PF10186.9 ORF45161 - 1.4 8.0 10.4 1.6 7.7 10.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 NYD-SP28_assoc PF14775.6 ORF45161 - 1.8 8.7 7.2 4.7 7.4 0.8 2.4 1 1 1 2 2 2 0 Sperm tail C-terminal domain V_ATPase_I PF01496.19 ORF45161 - 2.6 5.9 8.8 2.6 5.9 8.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ZapB PF06005.12 ORF45161 - 3 8.3 12.9 18 5.8 12.9 2.2 1 1 0 1 1 1 0 Cell division protein ZapB BaffR-Tall_bind PF09256.10 ORF4503 - 3.2 7.6 0.1 3.2 7.6 0.1 2.6 2 1 0 2 2 2 0 BAFF-R, TALL-1 binding Nup188_C PF18378.1 ORF44880 - 0.12 11.2 0.0 0.13 11.1 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain PAP_central PF04928.17 ORF4443 - 0.024 13.6 0.1 0.027 13.5 0.1 1.1 1 0 0 1 1 1 0 Poly(A) polymerase central domain Orf78 PF06024.12 ORF43853 - 0.025 14.9 0.0 0.032 14.5 0.0 1.2 1 0 0 1 1 1 0 Orf78 (ac78) DUF1065 PF06358.11 ORF43565 - 0.0052 16.7 0.0 0.0056 16.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1065) NTS PF15447.6 ORF43452 - 0.11 13.0 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 N-terminal segments of PfEMP1 AgrB PF04647.15 ORF43410 - 0.0085 15.4 8.8 0.0096 15.2 8.8 1.0 1 0 0 1 1 1 1 Accessory gene regulator B Phospholamban PF04272.14 ORF43410 - 0.045 13.2 6.2 0.045 13.2 6.2 2.3 2 1 0 2 2 2 0 Phospholamban DHHC PF01529.20 ORF43410 - 1.4 9.0 13.1 1.8 8.7 13.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase NADH_dehy_S2_C PF06444.11 ORF42245 - 0.13 12.7 0.6 0.13 12.7 0.6 1.9 1 1 1 2 2 2 0 NADH dehydrogenase subunit 2 C-terminus zf-RING_2 PF13639.6 ORF41642 - 2.7e-05 24.4 8.4 2.7e-05 24.4 8.4 1.7 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF41642 - 0.0027 17.7 3.8 0.0027 17.7 3.8 2.4 2 2 0 2 2 2 1 RING-type zinc-finger PHD PF00628.29 ORF41642 - 0.013 15.4 5.1 0.013 15.4 5.1 1.8 2 0 0 2 2 2 0 PHD-finger zf-RING_11 PF17123.5 ORF41642 - 0.016 15.0 5.8 0.016 15.0 5.8 2.2 2 0 0 2 2 2 0 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF41642 - 0.017 14.7 6.9 0.034 13.8 6.9 1.6 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-HC5HC2H PF13771.6 ORF41642 - 0.039 14.2 11.3 0.051 13.8 11.3 1.2 1 0 0 1 1 1 0 PHD-like zinc-binding domain zf-C3HC4_2 PF13923.6 ORF41642 - 0.33 10.8 12.3 0.074 12.9 8.2 2.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zf_RING PF16744.5 ORF41642 - 0.39 10.9 8.0 0.089 12.9 4.7 1.6 2 0 0 2 2 2 0 KIAA1045 RING finger zf-C3HC4 PF00097.25 ORF41642 - 0.94 9.4 14.4 0.053 13.4 7.2 2.5 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) 7TM_GPCR_Srt PF10321.9 ORF41498 - 0.00052 19.1 1.4 0.00056 19.0 1.4 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srt CxC6 PF18721.1 ORF41467 - 0.038 14.3 0.7 8.7 6.7 0.1 2.2 1 1 1 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases DUF4239 PF14023.6 ORF41173 - 0.07 12.8 0.0 0.078 12.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) CCER1 PF15482.6 ORF40847 - 0.053 13.4 0.5 0.057 13.3 0.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF5137 PF17220.3 ORF40847 - 0.12 13.3 0.0 0.15 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF5137) EssA PF10661.9 ORF40483 - 0.071 13.0 3.3 0.086 12.7 3.3 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA DUF1989 PF09347.10 ORF39672 - 0.15 11.7 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) KRTDAP PF15200.6 ORF39410 - 0.11 12.3 1.7 0.18 11.6 1.7 1.3 1 0 0 1 1 1 0 Keratinocyte differentiation-associated Somatomedin_B PF01033.17 ORF38943 - 0.28 11.6 7.9 0.48 10.9 7.9 1.4 1 0 0 1 1 1 0 Somatomedin B domain Tnp_22_trimer PF17489.2 ORF38649 - 0.2 11.7 4.1 4 7.5 0.3 2.2 2 0 0 2 2 2 0 L1 transposable element trimerization domain Orf78 PF06024.12 ORF38649 - 0.3 11.4 3.0 0.52 10.6 3.0 1.4 1 1 0 1 1 1 0 Orf78 (ac78) DUF3667 PF12412.8 ORF37087 - 0.036 13.6 0.0 0.065 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) MyTH4 PF00784.17 ORF36428 - 0.0076 16.7 0.4 0.0097 16.4 0.4 1.2 1 0 0 1 1 1 1 MyTH4 domain CD52 PF15116.6 ORF36333 - 0.041 13.9 0.6 0.078 13.0 0.6 1.6 1 0 0 1 1 1 0 CAMPATH-1 antigen Miga PF10265.9 ORF35338 - 1.9 7.4 6.0 1.9 7.4 6.0 1.0 1 0 0 1 1 1 0 Mitoguardin SecD-TM1 PF13721.6 ORF34104 - 0.16 12.5 0.2 0.2 12.2 0.2 1.2 1 0 0 1 1 1 0 SecD export protein N-terminal TM region E2_bind PF08825.10 ORF33991 - 0.079 13.1 0.2 0.39 10.9 0.0 1.9 2 0 0 2 2 2 0 E2 binding domain zf-LITAF-like PF10601.9 ORF33377 - 6.4e-10 39.1 15.0 6.4e-10 39.1 15.0 1.9 2 1 0 2 2 2 1 LITAF-like zinc ribbon domain SUa-2TM PF18179.1 ORF33377 - 0.046 13.0 1.3 0.048 12.9 1.3 1.1 1 0 0 1 1 1 0 SMODS- and Ubiquitin system-associated 2TM effector domain SNARE PF05739.19 ORF33377 - 0.34 10.9 4.6 0.16 12.0 2.2 1.6 1 1 1 2 2 2 0 SNARE domain DUF1713 PF08213.11 ORF32490 - 0.052 13.5 1.7 0.12 12.3 1.7 1.6 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1713) Ank_4 PF13637.6 ORF31963 - 0.00017 22.0 0.1 0.00048 20.6 0.0 1.8 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF31963 - 0.00028 21.2 0.1 0.051 14.0 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF31963 - 0.00036 21.1 0.0 0.00097 19.7 0.0 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF31963 - 0.0081 16.5 0.1 0.031 14.6 0.1 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF31963 - 0.026 15.0 0.2 5.2 8.0 0.1 3.2 3 2 0 3 3 3 0 Ankyrin repeat DUF2863 PF11062.8 ORF31963 - 0.12 10.7 0.0 0.13 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2863) Peptidase_S29 PF02907.15 ORF31913 - 0.14 11.9 0.2 0.2 11.4 0.2 1.2 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease DUF4407 PF14362.6 ORF31475 - 0.44 9.9 6.3 0.54 9.6 6.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1910 PF08928.10 ORF31475 - 1.1 9.3 7.4 1.6 8.7 7.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1910) DUF4523 PF15023.6 ORF30539 - 0.014 15.2 0.1 0.016 15.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4523) Mnd1 PF03962.15 ORF29570 - 0.026 14.8 0.3 0.045 14.0 0.3 1.4 1 0 0 1 1 1 0 Mnd1 HTH domain RNase_HII PF01351.18 ORF29570 - 0.11 12.4 0.4 0.12 12.2 0.4 1.1 1 0 0 1 1 1 0 Ribonuclease HII Spec3 PF15795.5 ORF29023 - 2.2e-11 44.2 11.7 3e-09 37.3 11.7 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein tRNA-synt_His PF13393.6 ORF28378 - 0.00096 18.5 0.0 0.0016 17.8 0.0 1.3 2 0 0 2 2 2 1 Histidyl-tRNA synthetase DUF515 PF04415.12 ORF28378 - 0.019 13.4 0.1 0.021 13.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Golgin_A5 PF09787.9 ORF2765 - 0.0015 18.1 11.6 0.0016 18.0 11.6 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 BAR_2 PF10455.9 ORF2765 - 0.0085 15.3 3.7 0.011 14.9 3.7 1.1 1 0 0 1 1 1 1 Bin/amphiphysin/Rvs domain for vesicular trafficking zf-C4H2 PF10146.9 ORF2765 - 0.17 12.2 9.9 0.18 12.1 9.9 1.0 1 0 0 1 1 1 0 Zinc finger-containing protein BSD PF03909.17 ORF2765 - 0.28 11.2 2.3 0.36 10.9 0.7 2.0 2 1 0 2 2 2 0 BSD domain FlaC_arch PF05377.11 ORF2765 - 0.35 11.3 5.4 1.2 9.6 0.3 2.8 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) APG6_N PF17675.1 ORF2765 - 0.39 11.2 10.6 0.57 10.7 10.6 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region Zein-binding PF04576.15 ORF2765 - 0.41 10.9 14.6 2.4 8.5 4.0 2.9 1 1 2 3 3 3 0 Zein-binding Prefoldin PF02996.17 ORF2765 - 0.48 10.3 13.1 1.1 9.2 1.1 2.1 2 0 0 2 2 2 0 Prefoldin subunit Activator_LAG-3 PF11498.8 ORF2765 - 0.85 8.5 12.6 0.97 8.3 12.6 1.0 1 0 0 1 1 1 0 Transcriptional activator LAG-3 Sec20 PF03908.13 ORF2765 - 1 9.3 6.9 0.96 9.4 3.1 2.1 1 1 1 2 2 2 0 Sec20 LPP PF04728.13 ORF2765 - 1.2 9.6 9.5 9.1 6.8 0.3 2.4 1 1 0 2 2 2 0 Lipoprotein leucine-zipper DUF724 PF05266.14 ORF2765 - 1.5 8.6 10.5 1.6 8.5 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Atg14 PF10186.9 ORF2765 - 2 7.4 11.6 6 5.9 11.7 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4349 PF14257.6 ORF2765 - 4.2 6.7 9.7 9.8 5.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) 7TM_GPCR_Srt PF10321.9 ORF2652 - 0.00052 19.1 1.4 0.00056 19.0 1.4 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srt Arb1 PF09692.10 ORF25637 - 0.064 12.4 0.1 0.064 12.4 0.1 1.0 1 0 0 1 1 1 0 Argonaute siRNA chaperone (ARC) complex subunit Arb1 ThiW PF09512.10 ORF25099 - 0.067 13.3 0.1 0.09 12.9 0.1 1.2 1 0 0 1 1 1 0 Thiamine-precursor transporter protein (ThiW) DUF4650 PF15509.6 ORF25084 - 0.014 14.8 0.1 0.015 14.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4650) TMEM215 PF15746.5 ORF24109 - 0.037 13.5 0.6 0.044 13.2 0.6 1.0 1 0 0 1 1 1 0 TMEM215 family PspB PF06667.12 ORF22756 - 0.12 12.4 0.4 0.2 11.7 0.4 1.4 1 0 0 1 1 1 0 Phage shock protein B GalP_UDP_tr_C PF02744.17 ORF21451 - 0.19 11.4 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain CCER1 PF15482.6 ORF19485 - 0.053 13.4 0.5 0.057 13.3 0.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF5137 PF17220.3 ORF19485 - 0.12 13.3 0.0 0.15 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF5137) Glyco_hydro_4C PF11975.8 ORF19147 - 0.0046 17.1 0.0 0.0058 16.7 0.0 1.1 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain HTH_37 PF13744.6 ORF17469 - 2.5e-12 46.6 0.2 3.3e-12 46.2 0.2 1.2 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 ORF17469 - 8.3e-12 45.0 0.1 1.3e-11 44.4 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 ORF17469 - 5.6e-09 36.2 0.3 7.9e-09 35.7 0.3 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF17469 - 3.9e-06 26.5 0.2 7.9e-06 25.5 0.2 1.6 1 1 0 1 1 1 1 Homeodomain-like domain MarR_2 PF12802.7 ORF17469 - 5.1e-06 26.3 0.3 7.2e-06 25.8 0.3 1.2 1 0 0 1 1 1 1 MarR family Sigma70_r4 PF04545.16 ORF17469 - 6.9e-05 22.3 0.2 0.00014 21.3 0.1 1.6 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 ORF17469 - 0.00029 20.3 0.0 0.00052 19.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 ORF17469 - 0.00062 20.1 0.1 0.0015 18.9 0.1 1.6 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain Sigma70_ECF PF07638.11 ORF17469 - 0.0018 18.2 0.1 0.002 18.1 0.1 1.1 1 0 0 1 1 1 1 ECF sigma factor Sigma70_r4_2 PF08281.12 ORF17469 - 0.003 17.2 0.1 0.0061 16.2 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_19 PF12844.7 ORF17469 - 0.0034 17.4 0.0 0.0048 16.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 ORF17469 - 0.0059 16.5 0.1 0.011 15.6 0.0 1.5 1 1 0 1 1 1 1 MarR family HTH_5 PF01022.20 ORF17469 - 0.011 15.6 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family KORA PF16509.5 ORF17469 - 0.012 15.9 0.1 0.018 15.3 0.1 1.4 1 1 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_20 PF12840.7 ORF17469 - 0.017 15.2 0.2 0.043 13.9 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_IclR PF09339.10 ORF17469 - 0.018 14.8 0.5 0.03 14.1 0.1 1.6 2 0 0 2 2 1 0 IclR helix-turn-helix domain DUF3071 PF11268.8 ORF17469 - 0.028 14.5 0.2 0.032 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3071) HTH_6 PF01418.17 ORF17469 - 0.035 14.1 0.1 0.057 13.4 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain, rpiR family Rrf2 PF02082.20 ORF17469 - 0.036 14.4 0.1 0.054 13.8 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_Crp_2 PF13545.6 ORF17469 - 0.041 13.9 0.2 0.057 13.4 0.2 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 ORF17469 - 0.054 13.7 0.2 0.074 13.3 0.2 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_Tnp_4 PF13613.6 ORF17469 - 0.058 13.1 0.0 0.094 12.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_28 PF13518.6 ORF17469 - 0.06 13.5 0.1 0.13 12.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.6 ORF17469 - 0.071 12.9 0.1 0.14 12.1 0.1 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_1 PF00126.27 ORF17469 - 0.079 12.9 0.6 0.6 10.1 0.1 2.2 1 1 1 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family Ank_4 PF13637.6 ORF17309 - 0.00017 22.0 0.1 0.00048 20.6 0.0 1.8 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF17309 - 0.00028 21.2 0.1 0.051 14.0 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF17309 - 0.00036 21.1 0.0 0.00097 19.7 0.0 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF17309 - 0.0081 16.5 0.1 0.031 14.6 0.1 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF17309 - 0.026 15.0 0.2 5.2 8.0 0.1 3.2 3 2 0 3 3 3 0 Ankyrin repeat DUF2863 PF11062.8 ORF17309 - 0.12 10.7 0.0 0.13 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2863) PspB PF06667.12 ORF15828 - 0.12 12.4 0.4 0.2 11.7 0.4 1.4 1 0 0 1 1 1 0 Phage shock protein B Med3 PF11593.8 ORF151111 - 2.7 7.1 3.9 3.1 6.9 3.9 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Herpes_capsid PF06112.11 ORF151111 - 4.8 7.2 6.9 5.9 6.9 6.9 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein SL4P PF17618.2 ORF150868 - 0.039 14.0 0.1 0.061 13.4 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized Strongylid L4 protein RCC1_2 PF13540.6 ORF149974 - 0.00033 20.4 4.9 0.11 12.3 0.4 2.6 2 1 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat MORN PF02493.20 ORF149754 - 1.2e-11 43.8 15.9 5.2e-06 26.0 1.3 4.0 5 0 0 5 5 5 3 MORN repeat Glycoprot_B_PH2 PF17417.2 ORF149313 - 0.39 11.1 2.1 19 5.7 0.1 2.0 1 1 1 2 2 2 0 Herpesvirus Glycoprotein B PH-like domain SmAKAP PF15127.6 ORF149197 - 0.0069 17.6 2.4 0.0088 17.2 2.4 1.1 1 0 0 1 1 1 1 Small membrane A-kinase anchor protein Atg8 PF02991.16 ORF149112 - 1.2e-24 86.5 0.0 1.4e-24 86.3 0.0 1.1 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF149112 - 0.016 15.6 0.0 0.022 15.2 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-like autophagy protein Apg12 DUF4554 PF15091.6 ORF148586 - 0.12 11.2 1.7 0.14 11.0 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) AFP PF02420.15 ORF147718 - 0.58 10.7 0.4 0.58 10.7 0.4 3.9 4 0 0 4 4 4 0 Insect antifreeze protein repeat PIG-U PF06728.13 ORF147289 - 1.4e-06 27.7 1.4 1.9e-06 27.2 1.4 1.2 1 0 0 1 1 1 1 GPI transamidase subunit PIG-U PHD_4 PF16866.5 ORF14663 - 0.38 10.9 6.7 0.67 10.1 6.8 1.4 1 1 0 1 1 1 0 PHD-finger DUF2690 PF10901.8 ORF146254 - 0.32 11.3 3.7 5.3 7.4 0.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2690) GCS2 PF04107.13 ORF14470 - 0.029 13.7 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) Bd3614_N PF14442.6 ORF14470 - 0.17 12.2 1.2 0.26 11.6 1.2 1.3 1 1 0 1 1 1 0 Bd3614-like deaminase N-terminal DUF2290 PF10053.9 ORF143198 - 0.068 12.6 1.6 0.087 12.3 1.6 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2290) LSM PF01423.22 ORF143075 - 6.7e-17 60.9 0.0 8.4e-17 60.6 0.0 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 ORF143075 - 1.7e-05 24.9 0.0 2.3e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Ataxin 2 SM domain Tudor_2 PF18104.1 ORF143075 - 0.012 15.2 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 Jumonji domain-containing protein 2A Tudor domain LSM14 PF12701.7 ORF143075 - 0.11 12.6 0.0 0.13 12.3 0.0 1.3 1 1 0 1 1 1 0 Scd6-like Sm domain MNNL PF07657.13 ORF142790 - 0.032 14.3 1.5 0.066 13.3 0.3 1.8 1 1 1 2 2 2 0 N terminus of Notch ligand # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks285.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks285.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks285.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks285.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AgrB PF04647.15 ORF142678 - 0.0085 15.4 8.8 0.0096 15.2 8.8 1.0 1 0 0 1 1 1 1 Accessory gene regulator B Phospholamban PF04272.14 ORF142678 - 0.045 13.2 6.2 0.045 13.2 6.2 2.3 2 1 0 2 2 2 0 Phospholamban DHHC PF01529.20 ORF142678 - 1.4 9.0 13.1 1.8 8.7 13.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase RIBIOP_C PF04950.12 ORF141686 - 2.2e-40 138.9 0.1 2.5e-40 138.7 0.1 1.0 1 0 0 1 1 1 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal Stevor PF17410.2 ORF141248 - 0.41 10.1 3.1 0.45 10.0 3.1 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame CarbpepA_inh PF02977.15 ORF140618 - 0.088 12.6 0.5 0.12 12.2 0.5 1.2 1 0 0 1 1 1 0 Carboxypeptidase A inhibitor YgbA_NO PF11756.8 ORF140515 - 0.036 14.4 0.0 0.04 14.3 0.0 1.1 1 0 0 1 1 1 0 Nitrous oxide-stimulated promoter MGTL PF17059.5 ORF139790 - 2.6 8.0 0.1 2.6 8.0 0.1 3.7 4 0 0 4 4 4 0 MgtA leader peptide RE_MamI PF09567.10 ORF138312 - 0.0051 16.5 0.4 0.006 16.2 0.4 1.0 1 0 0 1 1 1 1 MamI restriction endonuclease TaqI_C PF12950.7 ORF138312 - 0.04 14.0 0.3 0.068 13.2 0.3 1.4 1 1 0 1 1 1 0 TaqI-like C-terminal specificity domain YcgL PF05166.13 ORF138160 - 0.17 12.3 0.0 0.23 11.9 0.0 1.3 1 0 0 1 1 1 0 YcgL domain Glyco_transf_7N PF13733.6 ORF138134 - 0.053 13.2 0.0 0.06 13.0 0.0 1.1 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 Conotoxin_I2 PF17557.2 ORF137799 - 0.096 12.8 3.6 0.096 12.8 3.6 3.1 3 0 0 3 3 3 0 I2-superfamily conotoxins Toxin_2 PF00451.19 ORF137771 - 1.6 9.1 6.0 9.5 6.6 1.5 2.5 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 LCE6A PF15858.5 ORF137771 - 3.5 8.5 9.5 0.21 12.3 3.6 1.8 1 1 1 2 2 2 0 Late cornified envelope protein 6A family KRTAP PF11759.8 ORF136585 - 4.6 7.8 7.1 90 3.7 7.1 2.1 1 1 0 1 1 1 0 Keratin-associated matrix DUF640 PF04852.12 ORF136585 - 5.8 7.1 6.4 11 6.1 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF640) Dioxygenase_N PF04444.14 ORF135801 - 0.13 12.1 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Catechol dioxygenase N terminus DUF4094 PF13334.6 ORF134367 - 0.03 14.8 0.8 0.037 14.4 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) Hpr_kinase_C PF07475.12 ORF133952 - 0.053 13.0 1.5 0.06 12.9 1.5 1.0 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain Pkinase_C PF00433.24 ORF132330 - 0.00094 19.8 4.9 0.0017 19.0 4.9 1.5 1 1 0 1 1 1 1 Protein kinase C terminal domain D5_N PF08706.11 ORF132330 - 0.027 14.7 0.1 0.031 14.5 0.1 1.2 1 0 0 1 1 1 0 D5 N terminal like NADHdh PF00146.21 ORF132242 - 1.5e-30 106.6 9.4 1.6e-30 106.4 9.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase AAA_12 PF13087.6 ORF13152 - 2.9e-14 53.1 0.0 3.7e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain DUF2690 PF10901.8 ORF131302 - 0.32 11.3 3.7 5.3 7.4 0.9 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2690) DUF406 PF04175.12 ORF131166 - 1.9e-38 130.8 1.3 2.2e-38 130.6 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF406) Macin PF14865.6 ORF130548 - 0.0085 16.6 1.7 0.89 10.1 0.1 2.1 2 0 0 2 2 2 2 Macin GCD14 PF08704.10 ORF130548 - 0.081 12.6 0.0 0.099 12.3 0.0 1.0 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Troponin-I_N PF11636.8 ORF129922 - 7.7 6.6 21.3 0.42 10.6 13.0 3.0 2 1 0 2 2 2 0 Troponin I residues 1-32 EssA PF10661.9 ORF129900 - 0.071 13.0 3.3 0.086 12.7 3.3 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA Carla_C4 PF01623.17 ORF129395 - 0.013 15.4 2.2 0.013 15.4 2.2 1.7 2 0 0 2 2 2 0 Carlavirus putative nucleic acid binding protein Trypan_PARP PF05887.11 ORF129222 - 0.15 12.0 38.5 0.89 9.5 38.5 1.8 1 1 1 2 2 2 0 Procyclic acidic repetitive protein (PARP) TonB_N PF16031.5 ORF129222 - 0.42 11.1 44.8 7.5 7.1 45.5 1.9 1 1 0 1 1 1 0 TonB polyproline region AID PF18767.1 ORF127654 - 0.15 12.1 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Activation induced deaminase DUF2530 PF10745.9 ORF126801 - 0.023 14.9 0.0 0.031 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) DUF1289 PF06945.13 ORF126611 - 0.19 11.6 6.7 0.18 11.6 4.6 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1289) QVR PF17064.5 ORF126611 - 0.27 11.5 4.6 0.65 10.3 4.6 1.6 1 1 0 1 1 1 0 Sleepless protein zf-C3HC4_3 PF13920.6 ORF125795 - 0.0038 17.1 10.7 0.0064 16.3 10.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 ORF125795 - 0.011 15.9 9.7 0.018 15.2 9.7 1.4 1 0 0 1 1 1 0 zinc RING finger of MSL2 DNA_pol_A_exoN PF18305.1 ORF121018 - 0.073 13.4 0.0 11 6.4 0.0 2.2 1 1 1 2 2 2 0 3' to 5' exonuclease C-terminal domain Peptidase_C37 PF05416.12 ORF121018 - 0.18 10.3 0.3 0.15 10.5 0.3 1.1 1 0 0 1 1 1 0 Southampton virus-type processing peptidase Mersacidin PF16934.5 ORF120984 - 0.03 14.1 0.1 0.047 13.5 0.1 1.3 1 0 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) LRRNT PF01462.18 ORF12068 - 2 8.1 5.0 10 5.9 0.0 3.2 4 0 0 4 4 4 0 Leucine rich repeat N-terminal domain SEC-C PF02810.15 ORF120229 - 1.4e-10 40.8 10.0 2.1e-10 40.3 10.0 1.3 1 0 0 1 1 1 1 SEC-C motif HrpB7 PF09486.10 ORF120229 - 0.0056 17.1 4.1 0.0067 16.8 4.1 1.1 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) SLS PF14611.6 ORF120229 - 0.0091 15.8 1.0 0.011 15.6 1.0 1.1 1 0 0 1 1 1 1 Mitochondrial inner-membrane-bound regulator Virulence_fact PF13769.6 ORF120229 - 0.016 15.4 1.5 0.021 15.0 1.5 1.1 1 0 0 1 1 1 0 Virulence factor Folliculin PF11704.8 ORF120229 - 0.034 14.0 1.0 0.035 14.0 1.0 1.1 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport Pro_racemase PF05544.11 ORF120229 - 0.063 12.3 0.3 0.073 12.1 0.3 1.0 1 0 0 1 1 1 0 Proline racemase Methyltransf_23 PF13489.6 ORF119341 - 0.13 12.1 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Hpr_kinase_C PF07475.12 ORF118636 - 0.053 13.0 1.5 0.06 12.9 1.5 1.0 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain AgrB PF04647.15 ORF118257 - 0.0085 15.4 8.8 0.0096 15.2 8.8 1.0 1 0 0 1 1 1 1 Accessory gene regulator B Phospholamban PF04272.14 ORF118257 - 0.045 13.2 6.2 0.045 13.2 6.2 2.3 2 1 0 2 2 2 0 Phospholamban DHHC PF01529.20 ORF118257 - 1.4 9.0 13.1 1.8 8.7 13.1 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase MORN PF02493.20 ORF117512 - 3.9e-16 57.9 12.6 7.2e-05 22.4 0.1 3.3 3 0 0 3 3 3 3 MORN repeat CTK3_C PF12350.8 ORF117512 - 0.1 12.8 0.2 0.15 12.2 0.2 1.3 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 C-terminus KRTAP PF11759.8 ORF117268 - 4.6 7.8 7.1 90 3.7 7.1 2.1 1 1 0 1 1 1 0 Keratin-associated matrix DUF640 PF04852.12 ORF117268 - 5.8 7.1 6.4 11 6.1 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF640) CCER1 PF15482.6 ORF116696 - 0.053 13.4 0.5 0.057 13.3 0.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF5137 PF17220.3 ORF116696 - 0.12 13.3 0.0 0.15 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF5137) DNA_pol_viral_N PF00242.17 ORF116688 - 1.8 8.0 6.5 1.9 7.9 6.5 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) N-terminal domain NMDAR2_C PF10565.9 ORF116683 - 6 5.6 7.2 6.8 5.4 7.2 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus DUF4219 PF13961.6 ORF115753 - 0.31 10.8 3.2 4.5 7.0 0.7 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4219) YcgL PF05166.13 ORF115375 - 0.17 12.3 0.0 0.23 11.9 0.0 1.3 1 0 0 1 1 1 0 YcgL domain RAP1 PF07218.11 ORF1144 - 1.7 6.8 3.1 1.8 6.8 3.1 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF2576 PF10845.8 ORF114391 - 0.65 9.6 0.1 0.65 9.6 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) BAMBI PF06211.12 ORF1141 - 0.13 12.5 0.7 0.15 12.3 0.7 1.1 1 0 0 1 1 1 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain VESA1_N PF12785.7 ORF113534 - 0.042 12.8 0.1 0.046 12.7 0.1 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Babuvirus_MP PF07234.11 ORF1134 - 5.4 7.2 5.9 2.1 8.6 0.9 2.0 1 1 1 2 2 2 0 Movement and RNA silencing protein RAP1 PF07218.11 ORF112951 - 1.7 6.8 3.1 1.8 6.8 3.1 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Urm1 PF09138.11 ORF112410 - 5.2e-31 106.9 0.3 5.7e-31 106.7 0.3 1.0 1 0 0 1 1 1 1 Urm1 (Ubiquitin related modifier) ThiS PF02597.20 ORF112410 - 1.8e-09 38.1 0.0 2e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 ORF112410 - 0.13 12.4 1.8 1.6 8.8 0.1 2.6 3 0 0 3 3 3 0 ThiS-like ubiquitin TMEM219 PF14940.6 ORF112251 - 0.062 12.9 0.9 0.068 12.7 0.9 1.1 1 0 0 1 1 1 0 Transmembrane 219 Cu_amine_oxidN1 PF07833.11 ORF111756 - 0.078 13.5 0.0 0.098 13.2 0.0 1.2 1 0 0 1 1 1 0 Copper amine oxidase N-terminal domain KdgM PF06178.13 ORF111550 - 7e-08 32.4 6.8 7.5e-08 32.3 6.8 1.0 1 0 0 1 1 1 1 Oligogalacturonate-specific porin protein (KdgM) BBP2 PF07642.11 ORF111550 - 0.00013 21.3 1.8 0.00014 21.2 1.8 1.0 1 0 0 1 1 1 1 Putative beta-barrel porin-2, OmpL-like. bbp2 YfaZ PF07437.11 ORF111550 - 0.082 12.5 0.3 0.089 12.4 0.3 1.2 1 1 0 1 1 1 0 YfaZ precursor Casc1_N PF15927.5 ORF110191 - 3.1 7.5 41.3 53 3.4 41.3 2.0 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus MDFI PF15316.6 ORF110191 - 8 6.5 8.6 8.6 6.4 8.6 1.0 1 0 0 1 1 1 0 MyoD family inhibitor GRDP-like PF07173.12 ORF110166 - 0.0076 16.9 0.3 0.0076 16.9 0.3 1.9 1 1 1 2 2 2 1 Glycine-rich domain-containing protein-like DUF4187 PF13821.6 ORF110166 - 0.062 13.1 0.2 0.093 12.5 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) P19Arf_N PF07392.12 ORF109385 - 0.05 14.1 0.4 0.13 12.7 0.1 1.8 2 0 0 2 2 2 0 Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus DUF4882 PF16223.5 ORF108881 - 0.018 14.3 0.1 0.02 14.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4882) MBG_2 PF18676.1 ORF108881 - 0.071 13.8 0.0 0.09 13.4 0.0 1.1 1 0 0 1 1 1 0 MBG domain (YGX type) T2SS-T3SS_pil_N PF13629.6 ORF106775 - 0.097 12.4 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Pilus formation protein N terminal region HsdM_N PF12161.8 ORF106669 - 0.099 13.3 0.0 0.099 13.3 0.0 1.2 1 0 0 1 1 1 0 HsdM N-terminal domain DNA_mis_repair PF01119.19 ORF105633 - 0.032 13.9 0.1 0.037 13.7 0.1 1.2 1 0 0 1 1 1 0 DNA mismatch repair protein, C-terminal domain Lambda_Bor PF06291.11 ORF104657 - 0.07 13.2 0.0 0.096 12.7 0.0 1.2 1 0 0 1 1 1 0 Bor protein UPF0093 PF03653.13 ORF104568 - 0.024 14.9 1.0 0.032 14.5 1.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) Gemini_AL3 PF01407.17 ORF102463 - 0.048 13.5 1.3 0.068 13.0 1.3 1.5 1 1 0 1 1 1 0 Geminivirus AL3 protein IQCJ-SCHIP1 PF15157.6 ORF102432 - 0.2 11.5 2.5 0.23 11.3 2.5 1.1 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif Pdase_C33_assoc PF14756.6 ORF102178 - 0.011 15.7 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 0 Peptidase_C33-associated domain CEP170_C PF15308.6 ORF10213 - 0.17 10.5 0.1 0.18 10.3 0.1 1.1 1 0 0 1 1 1 0 CEP170 C-terminus zf-C2H2_11 PF16622.5 NODE_59876_length_277_cov_1.082645_g51936_i0reverse_frame_1 - 0.056 13.2 5.5 0.056 13.2 5.5 2.4 3 0 0 3 3 3 0 zinc-finger C2H2-type ThiW PF09512.10 NODE_59876_length_277_cov_1.082645_g51936_i0reverse_frame_1 - 0.16 12.1 0.1 0.2 11.7 0.1 1.3 1 1 0 1 1 1 0 Thiamine-precursor transporter protein (ThiW) DUF2304 PF10066.9 NODE_59872_length_277_cov_1.219008_g51932_i0forward_frame_1 - 0.012 15.8 2.9 0.013 15.7 2.9 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) DUF2083 PF09856.9 NODE_59871_length_277_cov_1.243802_g51931_i0forward_frame_1 - 0.025 14.4 0.2 0.028 14.3 0.2 1.2 1 0 0 1 1 1 0 Predicted transcriptional regulator (DUF2083) ACT PF01842.25 NODE_59870_length_277_cov_1.268595_g51930_i0reverse_frame_1 - 4.7e-05 23.1 0.1 7.3e-05 22.5 0.1 1.3 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.6 NODE_59870_length_277_cov_1.268595_g51930_i0reverse_frame_1 - 0.0054 16.5 0.0 0.0085 15.9 0.0 1.3 1 0 0 1 1 1 1 ACT domain SecD-TM1 PF13721.6 NODE_59870_length_277_cov_1.268595_g51930_i0reverse_frame_1 - 0.064 13.7 0.1 0.14 12.6 0.1 1.4 1 1 1 2 2 2 0 SecD export protein N-terminal TM region DUF1765 PF08578.10 NODE_59868_length_277_cov_1.380165_g51928_i0reverse_frame_1 - 0.0097 16.4 1.8 0.012 16.1 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1765) DUF4015 PF13200.6 NODE_59864_length_277_cov_1.425620_g51924_i0reverse_frame_1 - 0.13 11.3 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 Putative glycosyl hydrolase domain TMIE PF16038.5 NODE_59857_length_277_cov_1.648760_g51917_i0forward_frame_1 - 0.17 11.7 4.2 0.24 11.3 4.2 1.3 1 0 0 1 1 1 0 TMIE protein Utp14 PF04615.13 NODE_59848_length_277_cov_1.760331_g51908_i0reverse_frame_1 - 0.022 13.4 6.1 0.026 13.1 6.1 1.3 1 1 0 1 1 1 0 Utp14 protein Poty_coat PF00767.18 NODE_59848_length_277_cov_1.760331_g51908_i0reverse_frame_1 - 0.078 12.5 1.9 0.13 11.8 0.4 1.7 1 1 1 2 2 2 0 Potyvirus coat protein DUF1053 PF06327.14 NODE_59848_length_277_cov_1.760331_g51908_i0reverse_frame_1 - 0.27 11.8 2.6 0.34 11.5 2.5 1.3 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1053) SLR1-BP PF07333.12 NODE_59847_length_277_cov_1.772727_g51907_i0reverse_frame_1 - 0.64 10.5 5.8 3.4 8.2 0.4 2.4 2 1 1 3 3 3 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) FAD-SLDH PF12318.8 NODE_59840_length_277_cov_1.917355_g51900_i0reverse_frame_1 - 0.026 14.6 0.1 0.036 14.1 0.1 1.3 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase CCDC92 PF14916.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.0027 17.4 4.2 0.0027 17.4 4.2 2.3 2 1 0 2 2 2 1 Coiled-coil domain of unknown function DUF4404 PF14357.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.018 15.6 4.0 0.035 14.7 3.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) DUF1132 PF06575.12 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.037 14.4 0.6 0.087 13.2 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1132) Tropomyosin_1 PF12718.7 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.043 14.0 10.2 0.051 13.7 10.2 1.2 1 0 0 1 1 1 0 Tropomyosin like Prefoldin_2 PF01920.20 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.05 13.6 2.9 0.05 13.6 2.9 2.2 2 0 0 2 2 2 0 Prefoldin subunit MRF_C1 PF13887.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.09 12.0 1.6 4.9 6.4 0.2 2.5 2 0 0 2 2 2 0 Myelin gene regulatory factor -C-terminal domain 1 OmpH PF03938.14 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.11 12.9 9.8 0.12 12.8 9.8 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4515 PF14988.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.17 11.7 12.8 0.92 9.3 2.7 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4515) FdhE PF04216.12 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.25 11.2 1.5 0.27 11.1 1.5 1.0 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation DUF1664 PF07889.12 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.47 10.5 7.8 1.1 9.3 4.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FapA PF03961.13 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.49 9.0 8.5 0.54 8.8 8.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4446 PF14584.6 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.77 9.7 4.2 1 9.3 3.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) DUF2802 PF10975.8 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 0.85 9.8 5.7 2.2 8.5 0.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2802) Atg14 PF10186.9 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 1.8 7.6 7.5 2.3 7.2 7.5 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 SlyX PF04102.12 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 1.9 9.2 9.3 61 4.3 9.3 2.3 1 1 0 1 1 1 0 SlyX ABC_tran_CTD PF16326.5 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 1.9 8.8 12.3 8 6.8 10.6 2.5 1 1 1 2 2 2 0 ABC transporter C-terminal domain Fungal_TACC PF12709.7 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 2.8 8.4 10.7 0.85 10.1 1.6 2.3 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins FlaC_arch PF05377.11 NODE_59839_length_277_cov_1.917355_g51899_i0forward_frame_1 - 8.4 6.9 9.4 2.2e+03 -0.9 9.4 2.8 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Lig_chan PF00060.26 NODE_59828_length_277_cov_2.000000_g51888_i0forward_frame_1 - 0.12 12.2 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Ligand-gated ion channel PP2C PF00481.21 NODE_59823_length_277_cov_2.115702_g51883_i0forward_frame_1 - 8.6e-12 45.2 0.1 9.9e-12 45.0 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DUF3810 PF12725.7 NODE_59822_length_277_cov_2.123967_g51882_i0reverse_frame_1 - 0.84 8.9 3.3 0.92 8.8 3.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) zf-U1 PF06220.12 NODE_59820_length_277_cov_2.190083_g51880_i0forward_frame_1 - 0.015 15.1 2.3 0.015 15.1 2.3 2.2 2 0 0 2 2 2 0 U1 zinc finger Nepo_coat_N PF03689.15 NODE_59812_length_277_cov_2.495868_g51872_i0reverse_frame_1 - 0.099 12.6 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain RRS1 PF04939.12 NODE_59811_length_277_cov_2.524793_g51871_i0forward_frame_1 - 0.0013 18.6 0.1 0.0015 18.5 0.1 1.1 1 0 0 1 1 1 1 Ribosome biogenesis regulatory protein (RRS1) DUF443 PF04276.12 NODE_59808_length_277_cov_2.595041_g51868_i0reverse_frame_1 - 0.017 15.0 3.6 0.019 14.8 3.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF443) DUF2321 PF10083.9 NODE_59807_length_277_cov_2.603306_g51867_i0reverse_frame_1 - 0.47 10.1 2.3 0.54 9.9 2.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) PP2C PF00481.21 NODE_59803_length_277_cov_2.863636_g51863_i0forward_frame_1 - 1.5e-06 28.0 0.0 1.8e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C ELH PF02323.15 NODE_59802_length_277_cov_2.966942_g51862_i0forward_frame_1 - 0.46 9.8 1.2 0.49 9.7 1.2 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor FAM176 PF14851.6 NODE_59799_length_277_cov_3.648760_g51859_i0forward_frame_1 - 6.4 6.4 7.1 2.6 7.7 1.6 2.0 2 0 0 2 2 2 0 FAM176 family Etmic-2 PF06670.11 NODE_59795_length_277_cov_5.760331_g51855_i0reverse_frame_1 - 0.049 12.6 0.2 0.055 12.4 0.2 1.1 1 0 0 1 1 1 0 Microneme protein Etmic-2 OSTMP1 PF09777.9 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_1 - 0.012 15.0 3.4 0.013 15.0 3.4 1.0 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor FAP206 PF12018.8 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_1 - 0.018 14.5 2.6 0.019 14.5 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function 3H PF02829.14 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_1 - 0.02 15.2 0.5 0.027 14.8 0.5 1.2 1 0 0 1 1 1 0 3H domain DUF5409 PF17421.2 NODE_59782_length_277_cov_49.871901_g51842_i0forward_frame_1 - 0.046 14.4 2.0 0.059 14.1 2.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Raftlin PF15250.6 NODE_59774_length_277_cov_55.404959_g51834_i0reverse_frame_1 - 6.3 5.4 12.6 6.3 5.4 12.6 1.0 1 0 0 1 1 1 0 Raftlin ApbA_C PF08546.11 NODE_59773_length_277_cov_55.892562_g51833_i0reverse_frame_1 - 0.083 13.1 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA C terminal Toprim_2 PF13155.6 NODE_59771_length_277_cov_58.198347_g51831_i0forward_frame_1 - 0.03 14.7 0.1 0.034 14.6 0.1 1.1 1 0 0 1 1 1 0 Toprim-like APS_kinase PF01583.20 NODE_59771_length_277_cov_58.198347_g51831_i0forward_frame_1 - 0.098 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Adenylylsulphate kinase V-SNARE PF05008.15 NODE_59762_length_277_cov_72.107438_g51822_i0forward_frame_1 - 0.12 12.7 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus YycH PF07435.11 NODE_59760_length_277_cov_74.929752_g51820_i0forward_frame_1 - 0.24 10.3 0.0 0.27 10.1 0.0 1.0 1 0 0 1 1 1 0 YycH protein Orthoreo_P10 PF07204.11 NODE_59757_length_277_cov_77.747934_g51817_i0reverse_frame_1 - 0.0062 16.5 0.0 0.0069 16.3 0.0 1.1 1 0 0 1 1 1 1 Orthoreovirus membrane fusion protein p10 TMEM169 PF15052.6 NODE_59752_length_277_cov_83.504132_g51812_i0reverse_frame_1 - 0.072 13.2 4.3 0.1 12.7 4.3 1.4 1 1 0 1 1 1 0 TMEM169 protein family PaO PF08417.12 NODE_59751_length_277_cov_83.954545_g51811_i0reverse_frame_1 - 0.078 13.1 0.0 0.081 13.1 0.0 1.2 1 0 0 1 1 1 0 Pheophorbide a oxygenase DUF3784 PF12650.7 NODE_59751_length_277_cov_83.954545_g51811_i0forward_frame_1 - 0.068 13.4 0.1 0.078 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) PSK PF06404.12 NODE_59745_length_277_cov_105.177686_g51805_i0reverse_frame_1 - 0.05 14.6 3.6 0.1 13.6 2.3 1.9 2 0 0 2 2 2 0 Phytosulfokine precursor protein (PSK) DUF21 PF01595.20 NODE_59735_length_277_cov_193.037190_g51795_i0forward_frame_1 - 0.059 13.1 0.0 0.075 12.7 0.0 1.2 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain MTBP_mid PF14919.6 NODE_59734_length_277_cov_195.731405_g51794_i0reverse_frame_1 - 0.033 13.4 0.0 0.033 13.4 0.0 1.1 1 0 0 1 1 1 0 MDM2-binding DUF5408 PF17402.2 NODE_59728_length_277_cov_277.504132_g51788_i0reverse_frame_1 - 0.36 10.7 6.6 1 9.3 1.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5408) MyTH4 PF00784.17 NODE_59728_length_277_cov_277.504132_g51788_i0reverse_frame_1 - 0.47 11.0 8.6 2.3 8.7 0.2 3.0 3 0 0 3 3 3 0 MyTH4 domain PAC4 PF16093.5 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_1 - 0.17 12.1 1.4 8.4 6.7 0.1 2.9 3 0 0 3 3 3 0 Proteasome assembly chaperone 4 Caveolin PF01146.17 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_1 - 0.23 11.4 1.7 0.38 10.7 1.7 1.4 1 1 0 1 1 1 0 Caveolin HPIP_like PF18524.1 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_1 - 0.54 10.1 9.2 14 5.6 0.1 3.4 3 0 0 3 3 3 0 High potential iron-sulfur protein like Zf_RING PF16744.5 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_1 - 8.8 6.5 11.2 45 4.2 4.2 3.0 2 1 0 2 2 2 0 KIAA1045 RING finger OAF PF14941.6 NODE_59727_length_277_cov_300.280992_g51787_i0reverse_frame_1 - 0.15 11.5 4.3 0.46 9.9 4.4 1.7 1 1 0 1 1 1 0 Transcriptional regulator, Out at first Asp PF00026.23 NODE_59727_length_277_cov_300.280992_g51787_i0forward_frame_1 - 0.067 12.6 0.0 0.067 12.6 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic aspartyl protease Thiolase_C PF02803.18 NODE_59721_length_277_cov_2493.847107_g51781_i0reverse_frame_1 - 0.11 12.2 1.0 0.15 11.7 1.0 1.2 1 0 0 1 1 1 0 Thiolase, C-terminal domain Peptidase_C1 PF00112.23 NODE_59719_length_277_cov_6841.731405_g51779_i0reverse_frame_1 - 1e-12 48.6 0.9 1.1e-12 48.5 0.9 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_59719_length_277_cov_6841.731405_g51779_i0reverse_frame_1 - 0.00038 19.4 0.2 0.00039 19.3 0.2 1.0 1 0 0 1 1 1 1 Peptidase C1-like family TLC PF03219.14 NODE_59718_length_277_cov_63829.268595_g51778_i0reverse_frame_1 - 0.16 10.7 6.9 0.2 10.4 6.9 1.0 1 0 0 1 1 1 0 TLC ATP/ADP transporter AzlC PF03591.14 NODE_59715_length_278_cov_1.004115_g51775_i0reverse_frame_1 - 0.085 13.3 0.1 0.094 13.2 0.1 1.1 1 0 0 1 1 1 0 AzlC protein Renin_r PF07850.14 NODE_59713_length_278_cov_1.127572_g51773_i0reverse_frame_1 - 2.5 8.7 6.9 0.22 12.1 0.6 2.0 1 1 1 2 2 2 0 Renin receptor-like protein Toxin_GhoT_OrtT PF10753.9 NODE_59711_length_278_cov_1.152263_g51771_i0forward_frame_1 - 0.018 15.2 0.2 0.018 15.2 0.2 1.8 2 0 0 2 2 2 0 Toxin GhoT_OrtT RNA_pol_Rpb2_5 PF04567.17 NODE_59709_length_278_cov_1.230453_g51769_i0reverse_frame_1 - 2.2e-17 63.4 1.6 4.3e-17 62.4 1.6 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpb2_6 PF00562.28 NODE_59709_length_278_cov_1.230453_g51769_i0reverse_frame_1 - 1.8e-09 37.2 0.1 2.1e-09 36.9 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 Leg1 PF05612.12 NODE_59709_length_278_cov_1.230453_g51769_i0reverse_frame_1 - 0.07 12.3 0.1 0.11 11.6 0.1 1.3 1 0 0 1 1 1 0 Leg1 Rubredoxin_2 PF18073.1 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 1.1e-07 31.4 9.7 1.5e-07 31.0 9.7 1.2 1 0 0 1 1 1 1 Rubredoxin metal binding domain ATPase PF06745.13 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 4.8e-05 22.8 2.0 6.4e-05 22.4 2.0 1.2 1 0 0 1 1 1 1 KaiC Rad51 PF08423.11 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 0.00023 20.5 0.2 0.00026 20.3 0.2 1.1 1 0 0 1 1 1 1 Rad51 CDH-cyt PF16010.5 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 0.013 15.2 1.0 0.014 15.1 1.0 1.1 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase PAXNEB PF05625.11 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 0.029 13.5 0.1 0.035 13.2 0.1 1.2 1 0 0 1 1 1 0 PAXNEB protein AAA_25 PF13481.6 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_1 - 0.085 12.4 0.1 0.1 12.2 0.1 1.2 1 0 0 1 1 1 0 AAA domain SR-25 PF10500.9 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_1 - 3.9 7.0 7.0 4.3 6.9 7.0 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DDE_Tnp_ISAZ013 PF07592.11 NODE_59693_length_278_cov_1.543210_g51753_i0reverse_frame_1 - 0.14 11.2 1.2 0.17 10.8 1.2 1.1 1 0 0 1 1 1 0 Rhodopirellula transposase DDE domain DivIC PF04977.15 NODE_59693_length_278_cov_1.543210_g51753_i0reverse_frame_1 - 0.15 11.9 1.1 0.18 11.6 1.1 1.1 1 0 0 1 1 1 0 Septum formation initiator Nse5 PF08691.10 NODE_59691_length_278_cov_1.580247_g51751_i0reverse_frame_1 - 0.038 12.7 0.2 0.045 12.4 0.2 1.0 1 0 0 1 1 1 0 DNA repair proteins Nse5 and Nse6 Antifungal_prot PF11402.8 NODE_59690_length_278_cov_1.588477_g51750_i0forward_frame_1 - 0.67 10.2 8.3 0.16 12.2 5.1 1.7 2 0 0 2 2 2 0 Antifungal protein CK1gamma_C PF12605.8 NODE_59689_length_278_cov_1.592593_g51749_i0reverse_frame_1 - 0.14 13.3 4.0 0.17 13.1 4.0 1.1 1 0 0 1 1 1 0 Casein kinase 1 gamma C terminal DUF5453 PF17534.2 NODE_59686_length_278_cov_1.654321_g51746_i0reverse_frame_1 - 0.019 14.9 0.3 0.02 14.8 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5453) VP4_haemagglut PF00426.18 NODE_59684_length_278_cov_1.695473_g51744_i0reverse_frame_1 - 0.06 13.6 0.1 0.067 13.4 0.1 1.1 1 0 0 1 1 1 0 Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain Ubiq-Cytc-red_N PF09165.10 NODE_59683_length_278_cov_1.711934_g51743_i0reverse_frame_1 - 0.081 13.8 0.0 0.11 13.4 0.0 1.1 1 0 0 1 1 1 0 Ubiquinol-cytochrome c reductase 8 kDa, N-terminal TEBP_beta PF07404.11 NODE_59682_length_278_cov_1.711934_g51742_i0reverse_frame_1 - 0.00059 19.3 0.2 0.00069 19.1 0.2 1.0 1 0 0 1 1 1 1 Telomere-binding protein beta subunit (TEBP beta) TPP1 PF10341.9 NODE_59682_length_278_cov_1.711934_g51742_i0reverse_frame_1 - 0.0037 17.2 0.1 0.0047 16.9 0.1 1.2 1 0 0 1 1 1 1 Shelterin complex subunit, TPP1/ACD zf-HC5HC2H_2 PF13832.6 NODE_59679_length_278_cov_1.748971_g51739_i0reverse_frame_1 - 0.0065 16.6 2.1 0.0078 16.4 2.0 1.4 1 1 0 1 1 1 1 PHD-zinc-finger like domain DUF4703 PF15775.5 NODE_59679_length_278_cov_1.748971_g51739_i0reverse_frame_1 - 0.044 13.6 0.7 0.053 13.3 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4703) GCM PF03615.15 NODE_59679_length_278_cov_1.748971_g51739_i0forward_frame_1 - 4.1 7.3 7.4 4.9 7.0 7.4 1.1 1 0 0 1 1 1 0 GCM motif protein DUF4787 PF16029.5 NODE_59677_length_278_cov_1.806584_g51737_i0forward_frame_1 - 0.073 13.2 0.2 0.1 12.7 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4787) DUF4100 PF13352.6 NODE_59676_length_278_cov_1.818930_g51736_i0forward_frame_1 - 4.6 7.0 7.0 5.3 6.7 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4100) YidD PF01809.18 NODE_59674_length_278_cov_1.855967_g51734_i0forward_frame_1 - 0.027 14.3 0.0 0.027 14.3 0.0 1.6 2 0 0 2 2 2 0 Putative membrane protein insertion efficiency factor DIPSY PF11763.8 NODE_59674_length_278_cov_1.855967_g51734_i0forward_frame_1 - 0.16 12.2 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Cell-wall adhesin ligand-binding C-terminal DUF5531 PF17671.1 NODE_59673_length_278_cov_1.888889_g51733_i0forward_frame_1 - 0.7 9.8 2.5 0.91 9.4 2.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5531) EMP70 PF02990.16 NODE_59670_length_278_cov_1.958848_g51730_i0reverse_frame_1 - 0.62 8.7 15.1 0.71 8.5 15.1 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 NPR1_interact PF15699.5 NODE_59669_length_278_cov_1.971193_g51729_i0forward_frame_1 - 0.12 13.0 0.4 0.14 12.8 0.4 1.1 1 0 0 1 1 1 0 NPR1 interacting Sugar_tr PF00083.24 NODE_59668_length_278_cov_2.004115_g51728_i0reverse_frame_1 - 2.6e-12 46.3 0.0 2.7e-12 46.3 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter CNOT1_HEAT_N PF16419.5 NODE_59659_length_278_cov_2.209877_g51719_i0reverse_frame_1 - 0.032 13.9 0.2 0.033 13.9 0.2 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat Prolactin_RP PF15172.6 NODE_59653_length_278_cov_2.292181_g51713_i0forward_frame_1 - 0.12 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Prolactin-releasing peptide KAP PF05804.12 NODE_59648_length_278_cov_2.432099_g51708_i0reverse_frame_1 - 1.7e-20 72.8 0.2 1.8e-20 72.7 0.2 1.0 1 0 0 1 1 1 1 Kinesin-associated protein (KAP) Lambda_CIII PF02061.16 NODE_59648_length_278_cov_2.432099_g51708_i0reverse_frame_1 - 0.068 13.2 0.0 0.19 11.8 0.0 1.7 2 0 0 2 2 2 0 Lambda Phage CIII DUF2975 PF11188.8 NODE_59645_length_278_cov_2.551440_g51705_i0forward_frame_1 - 0.06 13.2 0.1 0.067 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) PHD PF00628.29 NODE_59640_length_278_cov_3.123457_g51700_i0forward_frame_1 - 0.12 12.3 0.7 0.19 11.6 0.7 1.3 1 0 0 1 1 1 0 PHD-finger PGPGW PF09656.10 NODE_59636_length_278_cov_3.432099_g51696_i0forward_frame_1 - 0.38 10.3 6.2 6.9 6.3 3.4 2.2 1 1 1 2 2 2 0 Putative transmembrane protein (PGPGW) PGM_PMM_IV PF00408.20 NODE_59629_length_278_cov_23.794239_g51689_i0reverse_frame_1 - 8e-10 38.8 0.0 9.5e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASFV_J13L PF05568.11 NODE_59628_length_278_cov_28.555556_g51688_i0reverse_frame_1 - 0.18 11.6 3.3 0.21 11.3 3.3 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein HlyD_2 PF12700.7 NODE_59628_length_278_cov_28.555556_g51688_i0reverse_frame_1 - 1.8 7.2 3.2 3 6.5 3.2 1.3 1 0 0 1 1 1 0 HlyD family secretion protein DUF4252 PF14060.6 NODE_59620_length_278_cov_46.205761_g51680_i0reverse_frame_1 - 0.052 13.4 0.4 0.063 13.2 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) CENP-T_C PF15511.6 NODE_59620_length_278_cov_46.205761_g51680_i0reverse_frame_1 - 0.057 13.5 0.1 0.072 13.2 0.1 1.4 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold PWI PF01480.17 NODE_59617_length_278_cov_50.444444_g51677_i0reverse_frame_1 - 0.00073 19.8 0.0 0.0011 19.3 0.0 1.2 1 0 0 1 1 1 1 PWI domain Comm PF15957.5 NODE_59612_length_278_cov_51.148148_g51672_i0forward_frame_1 - 4.1 7.8 6.4 4.6 7.6 6.4 1.2 1 0 0 1 1 1 0 Commissureless DNA_pol_phi PF04931.13 NODE_59607_length_278_cov_56.905350_g51667_i0forward_frame_1 - 5.1 5.1 17.9 5.1 5.1 17.9 1.1 1 0 0 1 1 1 0 DNA polymerase phi ASC PF00858.24 NODE_59594_length_278_cov_90.082305_g51654_i0reverse_frame_1 - 0.027 13.5 0.5 0.028 13.4 0.5 1.0 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel UIM PF02809.20 NODE_59593_length_278_cov_95.781893_g51653_i0reverse_frame_1 - 0.00019 21.1 2.0 0.00019 21.1 2.0 3.4 4 2 0 4 4 4 1 Ubiquitin interaction motif RAP80_UIM PF18282.1 NODE_59593_length_278_cov_95.781893_g51653_i0reverse_frame_1 - 0.0031 17.2 1.7 0.0057 16.4 1.7 1.4 1 0 0 1 1 1 1 RAP80 N-terminal ubiquitin interaction motif FLYWCH PF04500.16 NODE_59586_length_278_cov_128.481481_g51646_i0reverse_frame_1 - 5.5 7.2 8.2 83 3.4 8.2 2.3 1 1 0 1 1 1 0 FLYWCH zinc finger domain DSPc PF00782.20 NODE_59585_length_278_cov_129.049383_g51645_i0forward_frame_1 - 2.3e-21 76.0 0.1 4.7e-21 75.0 0.0 1.5 1 1 1 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_59585_length_278_cov_129.049383_g51645_i0forward_frame_1 - 0.0017 17.9 0.5 0.0026 17.4 0.2 1.5 1 1 0 1 1 1 1 Protein-tyrosine phosphatase Serinc PF03348.15 NODE_59577_length_278_cov_199.930041_g51637_i0forward_frame_1 - 0.036 13.0 3.2 0.039 12.9 3.2 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) Vps52 PF04129.12 NODE_59577_length_278_cov_199.930041_g51637_i0forward_frame_1 - 0.098 11.4 6.6 0.12 11.1 6.6 1.0 1 0 0 1 1 1 0 Vps52 / Sac2 family BBIP10 PF14777.6 NODE_59576_length_278_cov_258.810700_g51636_i0reverse_frame_1 - 4.3e-23 80.6 4.2 5.1e-23 80.4 3.6 1.4 1 1 0 1 1 1 1 Cilia BBSome complex subunit 10 MbeB_N PF04837.12 NODE_59576_length_278_cov_258.810700_g51636_i0reverse_frame_1 - 0.012 15.9 1.3 0.026 14.8 1.3 1.5 1 0 0 1 1 1 0 MbeB-like, N-term conserved region Asp PF00026.23 NODE_59573_length_278_cov_588.267490_g51633_i0reverse_frame_1 - 3.8e-08 33.1 0.3 4.4e-08 32.9 0.3 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Fer2 PF00111.27 NODE_59570_length_278_cov_9207.518519_g51630_i0forward_frame_1 - 2.6e-05 24.1 0.1 2.6e-05 24.1 0.1 1.8 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain TMEM43 PF07787.12 NODE_59569_length_279_cov_0.872951_g51629_i0reverse_frame_1 - 0.0031 17.0 0.3 0.0033 16.9 0.3 1.0 1 0 0 1 1 1 1 Transmembrane protein 43 MaAIMP_sms PF16951.5 NODE_59565_length_279_cov_1.020492_g51625_i0reverse_frame_1 - 0.033 13.9 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Putative methionine and alanine importer, small subunit Ku_PK_bind PF08785.11 NODE_59562_length_279_cov_1.262295_g51622_i0forward_frame_1 - 0.013 15.7 0.1 0.014 15.6 0.1 1.1 1 0 0 1 1 1 0 Ku C terminal domain like UPAR_LY6_2 PF16975.5 NODE_59552_length_279_cov_1.430328_g51612_i0reverse_frame_1 - 0.0021 18.2 0.2 0.0027 17.9 0.2 1.3 1 0 0 1 1 1 1 Ly6/PLAUR domain-containing protein 6, Lypd6 DHHC PF01529.20 NODE_59549_length_279_cov_1.487705_g51609_i0forward_frame_1 - 0.15 12.1 4.4 0.25 11.4 4.4 1.4 1 0 0 1 1 1 0 DHHC palmitoyltransferase LRRNT PF01462.18 NODE_59541_length_279_cov_1.635246_g51601_i0reverse_frame_1 - 0.072 12.8 0.1 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain DUF4568 PF15132.6 NODE_59540_length_279_cov_1.647541_g51600_i0reverse_frame_1 - 0.033 13.6 0.2 0.036 13.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4568) Vac_Fusion PF02346.16 NODE_59535_length_279_cov_1.799180_g51595_i0forward_frame_1 - 0.0094 15.6 0.2 0.019 14.6 0.1 1.6 2 0 0 2 2 2 1 Chordopoxvirus multifunctional envelope protein A27 CRIC_ras_sig PF10534.9 NODE_59535_length_279_cov_1.799180_g51595_i0forward_frame_1 - 0.0095 16.1 0.7 0.014 15.6 0.7 1.1 1 0 0 1 1 1 1 Connector enhancer of kinase suppressor of ras WAK_assoc PF14380.6 NODE_59533_length_279_cov_1.807377_g51593_i0reverse_frame_1 - 0.45 11.3 2.8 0.59 10.9 2.8 1.1 1 0 0 1 1 1 0 Wall-associated receptor kinase C-terminal O-antigen_lig PF13425.6 NODE_59533_length_279_cov_1.807377_g51593_i0reverse_frame_1 - 2.6 6.7 9.1 3.1 6.5 9.1 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Sec62 PF03839.16 NODE_59533_length_279_cov_1.807377_g51593_i0reverse_frame_1 - 4.3 6.8 11.2 4.8 6.6 11.2 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Glutaminase PF04960.15 NODE_59518_length_279_cov_2.122951_g51578_i0forward_frame_1 - 2.4e-26 92.6 0.3 2.5e-26 92.5 0.3 1.0 1 0 0 1 1 1 1 Glutaminase PTPLA PF04387.14 NODE_59515_length_279_cov_2.172131_g51575_i0reverse_frame_1 - 0.019 14.7 0.3 0.024 14.4 0.3 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase-like protein, PTPLA Rotavirus_VP7 PF05868.11 NODE_59512_length_279_cov_2.348361_g51572_i0reverse_frame_1 - 0.058 12.8 0.4 0.063 12.7 0.4 1.0 1 0 0 1 1 1 0 Rotavirus major outer capsid protein VP7 VIT_2 PF13757.6 NODE_59511_length_279_cov_2.405738_g51571_i0reverse_frame_1 - 0.012 15.5 0.8 0.02 14.8 0.8 1.3 1 0 0 1 1 1 0 Vault protein inter-alpha-trypsin domain Herpes_capsid PF06112.11 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_1 - 1 9.4 3.9 1.3 9.1 3.9 1.2 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein MatE PF01554.18 NODE_59503_length_279_cov_2.672131_g51563_i0reverse_frame_1 - 5.1e-10 39.2 4.4 6.1e-10 39.0 4.4 1.1 1 0 0 1 1 1 1 MatE Fumarate_red_C PF02300.17 NODE_59503_length_279_cov_2.672131_g51563_i0reverse_frame_1 - 0.012 15.7 0.3 0.014 15.5 0.3 1.3 1 1 0 1 1 1 0 Fumarate reductase subunit C Rotamase PF00639.21 NODE_59503_length_279_cov_2.672131_g51563_i0forward_frame_1 - 0.027 15.4 0.1 0.031 15.2 0.1 1.1 1 0 0 1 1 1 0 PPIC-type PPIASE domain C2 PF00168.30 NODE_59500_length_279_cov_2.782787_g51560_i0forward_frame_1 - 1.7e-07 31.5 0.0 1.9e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 C2 domain Csc2 PF18320.1 NODE_59498_length_279_cov_2.926230_g51558_i0reverse_frame_1 - 0.076 12.0 0.0 0.087 11.8 0.0 1.2 1 0 0 1 1 1 0 Csc2 Crispr Goodbye PF17109.5 NODE_59484_length_279_cov_20.434426_g51544_i0forward_frame_1 - 0.0035 17.8 0.2 0.0043 17.5 0.2 1.1 1 0 0 1 1 1 1 fungal STAND N-terminal Goodbye domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks286.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks286.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks286.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks286.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:15:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Sec62 PF03839.16 NODE_59480_length_279_cov_33.036885_g51540_i0forward_frame_1 - 1.2 8.6 9.1 2.4 7.6 9.1 1.5 1 1 0 1 1 1 0 Translocation protein Sec62 YWFCY PF14293.6 NODE_59477_length_279_cov_38.885246_g51537_i0forward_frame_1 - 8.2 6.8 7.6 19 5.7 0.3 2.3 2 1 0 2 2 2 0 YWFCY protein Mac PF12464.8 NODE_59473_length_279_cov_50.393443_g51533_i0reverse_frame_1 - 0.44 10.8 4.8 8.4 6.7 1.1 2.3 1 1 1 2 2 2 0 Maltose acetyltransferase Peptidase_U32 PF01136.19 NODE_59467_length_279_cov_61.631148_g51527_i0forward_frame_1 - 0.079 12.1 0.1 0.097 11.8 0.1 1.1 1 0 0 1 1 1 0 Peptidase family U32 Sybindin PF04099.12 NODE_59464_length_279_cov_64.758197_g51524_i0reverse_frame_1 - 2.5e-06 27.5 0.0 3.7e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Sybindin-like family SpoU_sub_bind PF08032.12 NODE_59464_length_279_cov_64.758197_g51524_i0forward_frame_1 - 0.12 12.6 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 RNA 2'-O ribose methyltransferase substrate binding TniQ PF06527.11 NODE_59460_length_279_cov_67.700820_g51520_i0reverse_frame_1 - 0.059 14.1 0.2 0.073 13.8 0.2 1.2 1 0 0 1 1 1 0 TniQ Suv3_N PF18114.1 NODE_59460_length_279_cov_67.700820_g51520_i0forward_frame_1 - 0.036 14.2 0.1 0.048 13.8 0.1 1.2 1 0 0 1 1 1 0 Suv3 helical N-terminal domain ETRAMP PF09716.10 NODE_59458_length_279_cov_68.336066_g51518_i0reverse_frame_1 - 0.16 12.1 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) UL141 PF16758.5 NODE_59457_length_279_cov_68.377049_g51517_i0forward_frame_1 - 0.013 15.2 0.3 0.016 15.0 0.3 1.1 1 0 0 1 1 1 0 Herpes-like virus membrane glycoprotein UL141 DUF3127 PF11325.8 NODE_59453_length_279_cov_75.229508_g51513_i0forward_frame_1 - 0.032 14.5 0.0 0.038 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3127) MadM PF03818.13 NODE_59452_length_279_cov_77.286885_g51512_i0reverse_frame_1 - 0.065 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Malonate/sodium symporter MadM subunit PRONE PF03759.13 NODE_59450_length_279_cov_80.827869_g51510_i0reverse_frame_1 - 0.21 10.4 0.3 0.24 10.2 0.3 1.1 1 0 0 1 1 1 0 PRONE (Plant-specific Rop nucleotide exchanger) BPS1 PF05633.11 NODE_59441_length_279_cov_114.463115_g51501_i0forward_frame_1 - 0.012 14.7 0.4 0.016 14.2 0.4 1.2 1 0 0 1 1 1 0 Protein BYPASS1-related Toxin_11 PF07473.11 NODE_59439_length_279_cov_116.786885_g51499_i0reverse_frame_1 - 0.15 12.2 0.2 0.15 12.2 0.2 1.6 2 0 0 2 2 2 0 Spasmodic peptide gm9a; conotoxin from Conus species Phage_holin_T PF11031.8 NODE_59438_length_279_cov_117.262295_g51498_i0forward_frame_1 - 0.22 11.0 1.3 0.25 10.8 1.3 1.1 1 0 0 1 1 1 0 Bacteriophage T holin Imm40 PF15569.6 NODE_59437_length_279_cov_121.069672_g51497_i0reverse_frame_1 - 0.024 14.8 0.2 0.027 14.6 0.2 1.2 1 0 0 1 1 1 0 Immunity protein 40 RCC1_2 PF13540.6 NODE_59428_length_279_cov_214.102459_g51488_i0reverse_frame_1 - 7.7e-06 25.6 1.3 0.021 14.6 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 NODE_59428_length_279_cov_214.102459_g51488_i0reverse_frame_1 - 0.27 9.7 0.2 0.45 9.0 0.2 1.4 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Apo-CIII PF05778.12 NODE_59428_length_279_cov_214.102459_g51488_i0reverse_frame_1 - 0.29 10.8 0.9 6.5 6.5 0.1 2.1 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) PheRS_DBD2 PF18554.1 NODE_59428_length_279_cov_214.102459_g51488_i0reverse_frame_1 - 3.8 7.6 5.9 8.2 6.5 0.8 2.4 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Alginate_exp PF13372.6 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_1 - 0.012 14.3 1.3 5.4 5.6 0.0 2.9 2 1 1 3 3 3 0 Alginate export Proteasom_Rpn13 PF04683.13 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_1 - 0.022 15.3 0.2 9.3 6.9 0.0 2.8 1 1 2 3 3 3 0 Proteasome complex subunit Rpn13 ubiquitin receptor IL13 PF03487.13 NODE_59416_length_280_cov_0.975510_g51476_i0forward_frame_2 - 0.074 12.8 0.0 0.087 12.6 0.0 1.1 1 0 0 1 1 1 0 Interleukin-13 Ldh_1_N PF00056.23 NODE_59411_length_280_cov_1.253061_g51471_i0reverse_frame_2 - 0.00011 22.3 0.0 0.00017 21.7 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain TRIQK PF15168.6 NODE_59411_length_280_cov_1.253061_g51471_i0forward_frame_2 - 0.49 10.3 2.1 0.67 9.9 2.1 1.3 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family RecX PF02631.16 NODE_59406_length_280_cov_1.302041_g51466_i0reverse_frame_2 - 0.04 14.4 0.7 0.052 14.0 0.7 1.1 1 0 0 1 1 1 0 RecX family EF-hand_1 PF00036.32 NODE_59401_length_280_cov_1.469388_g51461_i0forward_frame_3 - 2.9e-05 23.3 0.1 4.8e-05 22.6 0.1 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_59401_length_280_cov_1.469388_g51461_i0forward_frame_3 - 0.0023 17.7 0.1 0.004 17.0 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 NODE_59401_length_280_cov_1.469388_g51461_i0forward_frame_3 - 0.0026 18.2 0.1 0.004 17.6 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_59401_length_280_cov_1.469388_g51461_i0forward_frame_3 - 0.12 12.2 0.2 0.34 10.8 0.3 1.6 2 0 0 2 2 2 0 EF-hand domain pair DNase_II PF03265.15 NODE_59400_length_280_cov_1.469388_g51460_i0reverse_frame_2 - 0.0022 17.3 3.5 0.0022 17.3 3.5 1.5 1 1 1 2 2 2 1 Deoxyribonuclease II DUF4710 PF15828.5 NODE_59400_length_280_cov_1.469388_g51460_i0reverse_frame_2 - 0.22 11.7 7.7 0.31 11.2 7.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DUF3974 PF13120.6 NODE_59400_length_280_cov_1.469388_g51460_i0forward_frame_3 - 0.12 12.5 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) Ephrin_rec_like PF07699.13 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 1.1e-08 34.7 36.5 0.00041 20.1 14.6 3.9 1 1 3 4 4 4 4 Putative ephrin-receptor like NCD3G PF07562.14 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 1.5e-07 31.2 25.6 0.00038 20.4 2.1 3.1 3 0 0 3 3 3 3 Nine Cysteines Domain of family 3 GPCR Opy2 PF09463.10 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 0.00017 21.8 32.7 0.034 14.5 5.6 3.2 3 0 0 3 3 3 3 Opy2 protein TNFR_c6 PF00020.18 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 0.012 16.0 31.3 0.14 12.6 2.5 4.9 1 1 4 5 5 5 0 TNFR/NGFR cysteine-rich region DUF2039 PF10217.9 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 0.81 10.1 19.1 0.59 10.5 2.9 3.0 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2039) DUF4215 PF13948.6 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 3.2 8.3 25.1 1.5 9.3 5.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4215) VSP PF03302.13 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 4.5 6.0 34.3 18 4.0 34.3 1.7 1 1 0 1 1 1 0 Giardia variant-specific surface protein Sp38 PF07354.12 NODE_59397_length_280_cov_1.567347_g51457_i0reverse_frame_2 - 4.9 6.5 24.9 2.5 7.5 6.8 2.9 1 1 1 3 3 3 0 Zona-pellucida-binding protein (Sp38) Cnd1 PF12717.7 NODE_59397_length_280_cov_1.567347_g51457_i0forward_frame_2 - 0.034 14.2 0.0 0.14 12.2 0.0 2.0 2 1 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 PKD_channel PF08016.12 NODE_59396_length_280_cov_1.575510_g51456_i0forward_frame_3 - 3e-06 26.2 12.6 3.6e-06 25.9 12.6 1.0 1 0 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 NODE_59396_length_280_cov_1.575510_g51456_i0forward_frame_3 - 0.0077 15.5 15.3 0.0094 15.2 15.3 1.1 1 0 0 1 1 1 1 Ion transport protein DUF702 PF05142.12 NODE_59393_length_280_cov_1.612245_g51453_i0reverse_frame_3 - 0.018 15.5 9.8 0.018 15.5 9.8 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF702) Tom7 PF08038.12 NODE_59385_length_280_cov_1.677551_g51445_i0reverse_frame_3 - 0.03 14.0 0.1 0.048 13.3 0.1 1.4 1 0 0 1 1 1 0 TOM7 family Omp_AT PF11557.8 NODE_59381_length_280_cov_1.710204_g51441_i0reverse_frame_3 - 0.17 10.8 0.1 0.21 10.5 0.1 1.1 1 0 0 1 1 1 0 Solitary outer membrane autotransporter beta-barrel domain RNA_pol_Rpb1_2 PF00623.20 NODE_59380_length_280_cov_1.742857_g51440_i0reverse_frame_2 - 0.029 14.6 0.0 0.032 14.5 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 2 FOLN PF09289.10 NODE_59379_length_280_cov_1.755102_g51439_i0reverse_frame_2 - 0.012 15.8 0.4 0.023 14.9 0.4 1.5 1 0 0 1 1 1 0 Follistatin/Osteonectin-like EGF domain I-EGF_1 PF18372.1 NODE_59374_length_280_cov_1.942857_g51434_i0reverse_frame_2 - 0.026 14.6 0.5 0.038 14.1 0.5 1.2 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 TPR_12 PF13424.6 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 4.9e-10 39.6 0.0 6.6e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 2.5e-05 23.9 0.2 0.00042 20.0 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 0.00073 19.3 0.0 0.0058 16.5 0.0 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 0.0011 19.1 0.3 0.025 14.8 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 0.013 15.5 0.1 0.13 12.4 0.0 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_59372_length_280_cov_1.987755_g51432_i0reverse_frame_3 - 0.014 15.4 0.0 0.031 14.3 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat DASH_Duo1 PF08651.10 NODE_59371_length_280_cov_2.008163_g51431_i0forward_frame_3 - 0.021 14.6 0.0 0.03 14.1 0.0 1.4 1 1 0 1 1 1 0 DASH complex subunit Duo1 Glyco_hydro_20 PF00728.22 NODE_59363_length_280_cov_2.175510_g51423_i0reverse_frame_2 - 3.4e-27 95.8 0.0 3.8e-27 95.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain Inhibitor_I42 PF09394.10 NODE_59362_length_280_cov_2.187755_g51422_i0forward_frame_2 - 0.14 12.6 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 Chagasin family peptidase inhibitor I42 DUF5074 PF16819.5 NODE_59361_length_280_cov_2.191837_g51421_i0forward_frame_3 - 0.076 13.1 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5074) HTH_DeoR PF08220.12 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 3.1e-17 62.1 0.1 4.1e-17 61.7 0.1 1.1 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain GntR PF00392.21 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 3.9e-06 26.4 0.1 5.3e-06 26.0 0.1 1.1 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 1.4e-05 24.9 0.0 1.8e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.002 18.0 0.0 0.0026 17.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family FeoC PF09012.10 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.0038 17.3 0.0 0.0049 16.9 0.0 1.2 1 0 0 1 1 1 1 FeoC like transcriptional regulator DUF1670 PF07900.11 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.011 15.1 0.0 0.012 15.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1670) MarR PF01047.22 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.037 14.0 0.0 0.053 13.5 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_24 PF13412.6 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.047 13.2 0.0 0.064 12.8 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Penicillinase_R PF03965.16 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.048 14.0 0.0 0.064 13.6 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor DUF977 PF06163.11 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.061 13.3 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) DDRGK PF09756.9 NODE_59358_length_280_cov_2.293878_g51418_i0reverse_frame_2 - 0.14 11.7 0.0 0.17 11.5 0.0 1.0 1 0 0 1 1 1 0 DDRGK domain Deltameth_res PF16020.5 NODE_59355_length_280_cov_2.334694_g51415_i0reverse_frame_3 - 0.41 10.6 2.5 0.61 10.0 0.7 2.1 2 1 0 2 2 2 0 Deltamethrin resistance DUF3925 PF13063.6 NODE_59353_length_280_cov_2.477551_g51413_i0forward_frame_3 - 0.1 12.8 2.3 0.18 12.1 0.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3925) CENP-T_N PF16171.5 NODE_59351_length_280_cov_2.497959_g51411_i0reverse_frame_3 - 0.15 10.9 0.0 0.17 10.7 0.0 1.1 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T N-terminus Tail_VII PF17091.5 NODE_59351_length_280_cov_2.497959_g51411_i0forward_frame_2 - 0.0076 16.1 0.1 0.014 15.2 0.1 1.4 1 0 0 1 1 1 1 Inovirus G7P protein SARG PF15385.6 NODE_59349_length_280_cov_2.506122_g51409_i0reverse_frame_3 - 0.017 14.4 0.3 0.017 14.4 0.3 1.0 1 0 0 1 1 1 0 Specifically androgen-regulated gene protein Toxin_5 PF05294.13 NODE_59348_length_280_cov_2.583673_g51408_i0forward_frame_3 - 1.6 9.2 10.3 0.72 10.3 4.3 2.7 3 0 0 3 3 3 0 Scorpion short toxin AstA PF04958.12 NODE_59348_length_280_cov_2.583673_g51408_i0forward_frame_2 - 4e-45 153.8 0.2 4.3e-45 153.7 0.2 1.0 1 0 0 1 1 1 1 Arginine N-succinyltransferase beta subunit DUF4215 PF13948.6 NODE_59344_length_280_cov_2.795918_g51404_i0forward_frame_3 - 0.0015 18.9 0.0 1.6 9.2 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4215) Copine PF07002.16 NODE_59344_length_280_cov_2.795918_g51404_i0forward_frame_2 - 0.089 12.2 0.0 5.9 6.3 0.0 2.0 1 1 1 2 2 2 0 Copine DUF2574 PF10836.8 NODE_59338_length_280_cov_3.248980_g51398_i0reverse_frame_2 - 0.052 13.4 0.6 0.09 12.7 0.5 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2574) HscB_4_cys PF18256.1 NODE_59337_length_280_cov_3.314286_g51397_i0forward_frame_2 - 0.029 14.2 1.7 0.029 14.2 1.7 1.9 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif EPSP_synthase PF00275.20 NODE_59333_length_280_cov_4.657143_g51393_i0reverse_frame_3 - 5.1e-26 91.3 0.0 5.5e-26 91.2 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Lamprin PF06403.11 NODE_59331_length_280_cov_5.555102_g51391_i0reverse_frame_3 - 3.7 7.5 17.7 0.55 10.2 6.9 2.1 1 1 1 2 2 2 0 Lamprin ATXN-1_C PF12547.8 NODE_59331_length_280_cov_5.555102_g51391_i0forward_frame_2 - 0.32 11.4 6.6 0.15 12.4 1.3 2.2 2 0 0 2 2 2 0 Capicua transcriptional repressor modulator DUF1364 PF07102.12 NODE_59329_length_280_cov_25.106122_g51389_i0reverse_frame_3 - 0.017 15.0 0.1 0.025 14.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1364) NIR_SIR PF01077.22 NODE_59328_length_280_cov_32.534694_g51388_i0reverse_frame_3 - 0.096 12.2 0.0 0.096 12.2 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59327_length_280_cov_32.697959_g51387_i0reverse_frame_3 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59326_length_280_cov_32.697959_g51386_i0forward_frame_3 - 0.062 12.8 0.0 0.062 12.8 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59325_length_280_cov_33.485714_g51385_i0reverse_frame_3 - 0.087 12.3 0.0 0.087 12.3 0.0 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain LIX1 PF14954.6 NODE_59321_length_280_cov_42.077551_g51381_i0reverse_frame_3 - 0.048 13.0 0.4 0.053 12.8 0.4 1.1 1 0 0 1 1 1 0 Limb expression 1 Pex2_Pex12 PF04757.14 NODE_59318_length_280_cov_44.624490_g51378_i0forward_frame_2 - 0.03 13.9 0.2 0.032 13.8 0.2 1.1 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region Period_C PF12114.8 NODE_59316_length_280_cov_55.036735_g51376_i0forward_frame_2 - 0.08 12.5 0.1 0.08 12.5 0.1 1.7 2 0 0 2 2 2 0 Period protein 2/3C-terminal region YabA PF06156.13 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.0006 20.4 9.9 0.00085 19.9 9.9 1.3 1 0 0 1 1 1 1 Initiation control protein YabA NEMO PF11577.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.0074 16.3 17.1 0.012 15.6 17.1 1.4 1 1 0 1 1 1 1 NF-kappa-B essential modulator NEMO ADIP PF11559.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.022 14.8 16.4 0.025 14.6 16.4 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding KfrA_N PF11740.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.031 15.0 10.4 0.3 11.8 2.5 2.0 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term CALCOCO1 PF07888.11 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.031 13.2 15.4 0.034 13.0 15.4 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like DivIC PF04977.15 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.032 14.0 19.7 0.11 12.3 9.8 2.3 1 1 1 2 2 2 0 Septum formation initiator DUF2660 PF10859.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.072 13.6 3.9 0.15 12.5 3.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2660) Mei5 PF10376.9 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.073 12.9 14.4 0.12 12.2 14.4 1.3 1 0 0 1 1 1 0 Double-strand recombination repair protein HAUS-augmin3 PF14932.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.081 12.5 13.9 0.089 12.4 13.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 TMCO5 PF14992.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.093 12.3 14.5 0.1 12.2 14.5 1.0 1 0 0 1 1 1 0 TMCO5 family Spc7 PF08317.11 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.094 11.6 17.3 0.11 11.4 17.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein CENP-H PF05837.12 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.14 12.6 11.7 0.16 12.4 11.7 1.2 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Golgin_A5 PF09787.9 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.16 11.4 14.3 0.17 11.3 14.3 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF2968 PF11180.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.18 11.5 9.5 0.19 11.3 9.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) ZapB PF06005.12 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.22 12.0 22.3 0.47 10.9 22.3 1.6 1 1 0 1 1 1 0 Cell division protein ZapB FtsL PF04999.13 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.28 11.2 8.6 0.3 11.1 7.9 1.4 1 1 0 1 1 1 0 Cell division protein FtsL DUF3450 PF11932.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.32 10.3 11.3 0.34 10.2 11.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) UPF0242 PF06785.11 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.51 10.4 17.6 0.58 10.2 17.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.71 10.4 23.2 3.3 8.2 23.2 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region JIP_LZII PF16471.5 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.81 9.9 15.4 6.2 7.1 14.8 2.1 1 1 0 1 1 1 0 JNK-interacting protein leucine zipper II bZIP_1 PF00170.21 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 0.85 9.8 20.4 1.6 8.8 5.0 2.6 1 1 2 3 3 3 0 bZIP transcription factor DUF1664 PF07889.12 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 1.8 8.6 6.0 2.4 8.2 6.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Jnk-SapK_ap_N PF09744.9 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 1.8 8.7 20.5 1.9 8.7 19.4 1.5 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 TolA_bind_tri PF16331.5 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 2 8.6 17.0 0.62 10.2 1.0 2.1 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF1843 PF08898.10 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 2.5 8.6 9.1 22 5.6 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF1843) bZIP_2 PF07716.15 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 2.9 8.0 23.8 0.29 11.2 3.4 3.1 1 1 2 3 3 3 0 Basic region leucine zipper Exonuc_VII_L PF02601.15 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 3 7.3 9.4 3.1 7.3 9.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit UPF0449 PF15136.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 3.6 8.1 13.8 11 6.6 13.8 1.8 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 V_ATPase_I PF01496.19 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 4.9 4.9 9.2 4.9 4.9 9.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family O-antigen_lig PF13425.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 6.1 5.5 4.5 6.4 5.5 4.5 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3552 PF12072.8 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 6.7 6.1 19.9 8.9 5.7 19.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) DUF4140 PF13600.6 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 9.2 6.8 13.2 9.2 6.8 4.1 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) TMPIT PF07851.13 NODE_59315_length_280_cov_55.138776_g51375_i0reverse_frame_2 - 9.3 5.4 9.0 10 5.3 9.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein PhaG_MnhG_YufB PF03334.14 NODE_59313_length_280_cov_59.093878_g51373_i0reverse_frame_2 - 0.038 14.2 0.1 0.055 13.7 0.1 1.2 1 0 0 1 1 1 0 Na+/H+ antiporter subunit TssO PF17561.2 NODE_59313_length_280_cov_59.093878_g51373_i0reverse_frame_2 - 2.2 8.4 7.6 3.4 7.8 7.6 1.3 1 0 0 1 1 1 0 Type VI secretion system, TssO DUF383 PF04063.14 NODE_59312_length_280_cov_60.093878_g51372_i0reverse_frame_3 - 0.013 15.2 0.3 0.013 15.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF383) hGDE_N PF14699.6 NODE_59311_length_280_cov_60.836735_g51371_i0reverse_frame_3 - 0.12 12.6 1.4 0.17 12.0 1.4 1.5 1 1 0 1 1 1 0 N-terminal domain from the human glycogen debranching enzyme DUF4513 PF14983.6 NODE_59310_length_280_cov_60.840816_g51370_i0reverse_frame_3 - 0.092 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4513) RasGEF_N PF00618.20 NODE_59310_length_280_cov_60.840816_g51370_i0reverse_frame_2 - 0.11 12.8 0.1 0.15 12.3 0.1 1.2 1 0 0 1 1 1 0 RasGEF N-terminal motif DUF5472 PF17566.2 NODE_59310_length_280_cov_60.840816_g51370_i0forward_frame_3 - 0.28 11.2 0.2 0.28 11.2 0.2 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5472) Trehalose_PPase PF02358.16 NODE_59309_length_280_cov_63.081633_g51369_i0reverse_frame_2 - 7.4e-08 31.8 0.3 9.3e-08 31.5 0.3 1.0 1 0 0 1 1 1 1 Trehalose-phosphatase DUF3113 PF11310.8 NODE_59309_length_280_cov_63.081633_g51369_i0reverse_frame_2 - 0.047 13.6 0.1 0.069 13.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3113) Thioredoxin_5 PF13743.6 NODE_59307_length_280_cov_67.032653_g51367_i0forward_frame_2 - 0.043 13.5 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin PUF PF00806.19 NODE_59307_length_280_cov_67.032653_g51367_i0forward_frame_2 - 0.19 11.5 0.6 0.35 10.7 0.0 1.9 2 0 0 2 2 2 0 Pumilio-family RNA binding repeat DUF4575 PF15143.6 NODE_59306_length_280_cov_68.261224_g51366_i0reverse_frame_2 - 0.063 13.5 2.5 0.072 13.3 2.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4575) Dynein_AAA_lid PF17852.1 NODE_59304_length_280_cov_68.612245_g51364_i0forward_frame_2 - 5.5e-09 36.2 0.1 7.2e-09 35.8 0.1 1.2 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain DUF4758 PF15950.5 NODE_59303_length_280_cov_68.742857_g51363_i0reverse_frame_2 - 0.092 13.1 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 Putative sperm flagellar membrane protein Pkinase PF00069.25 NODE_59303_length_280_cov_68.742857_g51363_i0forward_frame_3 - 1.9e-12 47.1 0.0 2e-12 47.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_59303_length_280_cov_68.742857_g51363_i0forward_frame_3 - 6.5e-06 25.6 0.0 8.1e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase MTTB PF06253.11 NODE_59300_length_280_cov_71.436735_g51360_i0reverse_frame_3 - 0.097 10.6 0.1 0.11 10.5 0.1 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) Fer2_3 PF13085.6 NODE_59296_length_280_cov_78.432653_g51356_i0reverse_frame_2 - 0.17 11.9 1.4 0.19 11.8 1.4 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Corona_S2 PF01601.16 NODE_59296_length_280_cov_78.432653_g51356_i0reverse_frame_2 - 2.3 6.6 5.5 2.6 6.5 5.5 1.1 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein LcrR PF09621.10 NODE_59296_length_280_cov_78.432653_g51356_i0forward_frame_2 - 0.008 15.6 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Type III secretion system regulator (LcrR) TspO_MBR PF03073.15 NODE_59294_length_280_cov_83.036735_g51354_i0forward_frame_3 - 1.5 8.9 10.3 2.5 8.1 10.1 1.5 1 1 0 1 1 1 0 TspO/MBR family DUF5463 PF17551.2 NODE_59294_length_280_cov_83.036735_g51354_i0forward_frame_3 - 3.6 7.6 10.0 2.3 8.2 0.2 3.0 4 0 0 4 4 4 0 Family of unknown function (DUF5463) DUF2085 PF09858.9 NODE_59281_length_280_cov_177.538776_g51341_i0forward_frame_2 - 0.069 13.6 0.1 0.073 13.6 0.1 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2085) DUF624 PF04854.14 NODE_59278_length_280_cov_266.428571_g51338_i0reverse_frame_2 - 0.009 16.1 0.1 0.013 15.6 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF624 TMEM239 PF15841.5 NODE_59278_length_280_cov_266.428571_g51338_i0forward_frame_3 - 0.45 10.4 4.6 0.53 10.2 4.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family Sgf11 PF08209.11 NODE_59275_length_280_cov_561.387755_g51335_i0reverse_frame_2 - 0.46 10.1 5.2 2 8.1 0.4 2.4 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) NYAP_N PF15439.6 NODE_59272_length_281_cov_1.134146_g51332_i0forward_frame_3 - 0.062 12.5 0.1 0.071 12.3 0.1 1.0 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter Vps23_core PF09454.10 NODE_59269_length_281_cov_1.276423_g51329_i0reverse_frame_2 - 0.023 14.6 0.0 0.034 14.1 0.0 1.3 1 0 0 1 1 1 0 Vps23 core domain PD-C2-AF1 PF09310.10 NODE_59265_length_281_cov_1.321138_g51325_i0forward_frame_2 - 0.1 12.0 0.1 0.14 11.6 0.1 1.1 1 0 0 1 1 1 0 POU domain, class 2, associating factor 1 Ilar_coat PF01787.16 NODE_59264_length_281_cov_1.321138_g51324_i0reverse_frame_3 - 0.24 11.1 2.4 0.26 11.0 2.4 1.1 1 0 0 1 1 1 0 Ilarvirus coat protein FWWh PF14922.6 NODE_59263_length_281_cov_1.341463_g51323_i0reverse_frame_2 - 0.0034 17.3 0.6 0.0041 17.1 0.3 1.3 1 1 0 1 1 1 1 Protein of unknown function Pox_A21 PF05323.12 NODE_59263_length_281_cov_1.341463_g51323_i0forward_frame_2 - 0.012 16.2 4.1 0.012 16.2 4.1 1.6 1 1 1 2 2 2 0 Poxvirus A21 Protein PIG-P PF08510.12 NODE_59263_length_281_cov_1.341463_g51323_i0forward_frame_2 - 0.076 12.9 0.6 0.1 12.5 0.6 1.2 1 0 0 1 1 1 0 PIG-P AIG1 PF04548.16 NODE_59261_length_281_cov_1.373984_g51321_i0forward_frame_3 - 0.052 12.9 2.3 0.056 12.8 2.3 1.1 1 0 0 1 1 1 0 AIG1 family Mad3_BUB1_I PF08311.12 NODE_59257_length_281_cov_1.443089_g51317_i0reverse_frame_3 - 0.008 16.2 0.8 0.0095 15.9 0.8 1.1 1 0 0 1 1 1 1 Mad3/BUB1 homology region 1 Omega-toxin PF06357.11 NODE_59256_length_281_cov_1.455285_g51316_i0reverse_frame_2 - 0.067 13.0 8.7 0.12 12.2 8.7 1.3 1 0 0 1 1 1 0 Omega-atracotoxin Molybdop_Fe4S4 PF04879.16 NODE_59254_length_281_cov_1.573171_g51314_i0forward_frame_3 - 0.12 12.4 0.1 0.17 11.9 0.1 1.3 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain PFEMP PF03011.15 NODE_59246_length_281_cov_1.707317_g51306_i0reverse_frame_2 - 0.13 12.9 6.6 0.16 12.6 6.6 1.1 1 0 0 1 1 1 0 PFEMP DBL domain DUF2778 PF10908.8 NODE_59246_length_281_cov_1.707317_g51306_i0forward_frame_3 - 0.025 14.8 0.3 0.029 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2778) MTCP1 PF08991.10 NODE_59246_length_281_cov_1.707317_g51306_i0forward_frame_3 - 0.079 13.2 1.3 0.079 13.2 1.3 1.7 2 0 0 2 2 2 0 Mature-T-Cell Proliferation I type DASH_Spc34 PF08657.10 NODE_59245_length_281_cov_1.723577_g51305_i0reverse_frame_2 - 0.036 13.9 0.0 0.036 13.8 0.0 1.1 1 0 0 1 1 1 0 DASH complex subunit Spc34 cNMP_binding PF00027.29 NODE_59245_length_281_cov_1.723577_g51305_i0forward_frame_3 - 7.7e-19 67.6 0.0 8.6e-19 67.4 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain AAT PF03417.16 NODE_59243_length_281_cov_1.756098_g51303_i0reverse_frame_2 - 0.024 14.4 0.0 0.025 14.3 0.0 1.0 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Mu-transpos_C PF09299.11 NODE_59243_length_281_cov_1.756098_g51303_i0reverse_frame_2 - 0.061 13.3 0.0 0.097 12.6 0.0 1.3 1 0 0 1 1 1 0 Mu transposase, C-terminal Vasculin PF15337.6 NODE_59243_length_281_cov_1.756098_g51303_i0reverse_frame_2 - 0.11 13.4 0.2 0.13 13.1 0.2 1.2 1 0 0 1 1 1 0 Vascular protein family Vasculin-like 1 Reprolysin_2 PF13574.6 NODE_59242_length_281_cov_1.768293_g51302_i0forward_frame_3 - 0.052 13.4 3.4 0.049 13.5 2.9 1.2 1 1 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Dsl1_N PF11988.8 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.0032 16.5 3.7 0.0035 16.4 3.7 1.2 1 0 0 1 1 1 1 Retrograde transport protein Dsl1 N terminal DUF3584 PF12128.8 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.034 11.7 8.4 0.037 11.6 8.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) TPR_MLP1_2 PF07926.12 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.036 14.1 13.3 0.043 13.9 13.3 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein SYCE1 PF15233.6 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.11 12.5 13.6 0.15 12.1 13.6 1.2 1 0 0 1 1 1 0 Synaptonemal complex central element protein 1 V_ATPase_I PF01496.19 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.14 10.0 7.7 0.16 9.9 7.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Cnn_1N PF07989.11 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.15 12.3 13.9 0.03 14.5 7.1 2.3 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF724 PF05266.14 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.27 11.0 9.0 0.31 10.8 9.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) AKNA PF12443.8 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 0.97 10.1 6.5 0.77 10.5 2.4 2.1 1 1 1 2 2 2 0 AT-hook-containing transcription factor G-gamma PF00631.22 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 1.2 9.2 7.6 19 5.4 0.7 3.0 1 1 2 3 3 3 0 GGL domain Atg14 PF10186.9 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 1.2 8.1 9.9 1.4 7.9 9.9 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LMBR1 PF04791.16 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 1.6 7.6 4.4 1.8 7.4 4.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein GrpE PF01025.19 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 4.1 7.0 13.3 25 4.5 13.3 1.9 1 1 0 1 1 1 0 GrpE TMPIT PF07851.13 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 4.2 6.5 8.7 4.9 6.3 8.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein OmpH PF03938.14 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 4.5 7.6 13.9 0.93 9.8 7.4 2.0 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) DUF4404 PF14357.6 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 5.2 7.8 9.9 3.7 8.3 2.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) Rho_Binding PF08912.11 NODE_59240_length_281_cov_1.780488_g51300_i0reverse_frame_3 - 7 7.6 19.0 2 9.3 8.6 2.1 1 1 1 2 2 2 0 Rho Binding Sid-5 PF17204.3 NODE_59235_length_281_cov_1.910569_g51295_i0reverse_frame_3 - 0.063 13.5 0.0 0.097 12.8 0.0 1.3 1 0 0 1 1 1 0 Sid-5 family DUF3481 PF11980.8 NODE_59235_length_281_cov_1.910569_g51295_i0forward_frame_2 - 0.48 10.2 5.7 0.39 10.4 4.8 1.5 1 1 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein AFT PF08731.11 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_2 - 0.025 15.0 1.4 0.027 14.9 1.4 1.0 1 0 0 1 1 1 0 Transcription factor AFT GASA PF02704.14 NODE_59234_length_281_cov_1.926829_g51294_i0forward_frame_2 - 0.052 13.7 8.1 0.052 13.7 8.1 2.9 3 0 0 3 3 3 0 Gibberellin regulated protein Acyl_transf_3 PF01757.22 NODE_59230_length_281_cov_1.971545_g51290_i0reverse_frame_3 - 7e-08 31.9 8.1 8.5e-08 31.6 8.1 1.2 1 0 0 1 1 1 1 Acyltransferase family O_anti_polymase PF01901.16 NODE_59230_length_281_cov_1.971545_g51290_i0reverse_frame_3 - 0.0045 16.3 6.2 0.0053 16.1 6.2 1.2 1 0 0 1 1 1 1 Putative O-antigen polymerase FUSC_2 PF13515.6 NODE_59230_length_281_cov_1.971545_g51290_i0reverse_frame_3 - 0.13 12.4 3.1 0.14 12.2 3.1 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein-like DUF1181 PF06680.11 NODE_59230_length_281_cov_1.971545_g51290_i0forward_frame_3 - 1.3 8.8 4.3 0.36 10.7 1.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1181) PPR PF01535.20 NODE_59229_length_281_cov_1.979675_g51289_i0forward_frame_3 - 0.092 13.0 0.4 0.37 11.1 0.2 2.1 1 1 1 2 2 2 0 PPR repeat PPR_1 PF12854.7 NODE_59229_length_281_cov_1.979675_g51289_i0forward_frame_3 - 0.18 11.5 0.5 0.59 9.9 0.0 2.0 2 0 0 2 2 2 0 PPR repeat GRASP55_65 PF04495.14 NODE_59225_length_281_cov_2.028455_g51285_i0forward_frame_3 - 2.1e-09 37.8 0.0 2.2e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain PDZ_6 PF17820.1 NODE_59225_length_281_cov_2.028455_g51285_i0forward_frame_3 - 9.7e-05 22.1 0.0 0.00013 21.7 0.0 1.2 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 NODE_59225_length_281_cov_2.028455_g51285_i0forward_frame_3 - 0.0097 16.2 0.0 0.012 15.9 0.0 1.2 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 NODE_59225_length_281_cov_2.028455_g51285_i0forward_frame_3 - 0.033 14.5 0.0 0.042 14.2 0.0 1.2 1 0 0 1 1 1 0 PDZ domain Mtf2_C PF14061.6 NODE_59224_length_281_cov_2.182927_g51284_i0forward_frame_3 - 0.12 12.6 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 Furin-like_2 PF15913.5 NODE_59222_length_281_cov_2.231707_g51282_i0forward_frame_3 - 0.00029 20.9 2.9 0.00032 20.8 2.9 1.1 1 0 0 1 1 1 1 Furin-like repeat, cysteine-rich zf-C2H2_6 PF13912.6 NODE_59222_length_281_cov_2.231707_g51282_i0forward_frame_3 - 2.8 8.0 6.3 6.3 6.9 0.8 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger BCD PF15461.6 NODE_59220_length_281_cov_2.268293_g51280_i0forward_frame_2 - 0.099 12.1 0.1 0.099 12.1 0.1 1.1 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase Cnn_1N PF07989.11 NODE_59219_length_281_cov_2.325203_g51279_i0reverse_frame_3 - 0.12 12.5 0.1 0.26 11.5 0.0 1.5 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 Fn3-like PF14310.6 NODE_59212_length_281_cov_2.634146_g51272_i0reverse_frame_2 - 0.06 13.5 0.0 0.11 12.6 0.0 1.4 1 1 0 1 1 1 0 Fibronectin type III-like domain RBB1NT PF08169.11 NODE_59204_length_281_cov_3.036585_g51264_i0forward_frame_3 - 0.033 14.3 0.0 0.041 14.0 0.0 1.1 1 0 0 1 1 1 0 RBB1NT (NUC162) domain Vac14_Fig4_bd PF11916.8 NODE_59197_length_281_cov_3.593496_g51257_i0forward_frame_2 - 0.089 12.4 0.5 0.1 12.3 0.5 1.1 1 0 0 1 1 1 0 Vacuolar protein 14 C-terminal Fig4p binding DUF2415 PF10313.9 NODE_59190_length_281_cov_5.345528_g51250_i0reverse_frame_3 - 0.61 10.1 1.9 26 4.8 0.3 2.3 2 0 0 2 2 2 0 Uncharacterised protein domain (DUF2415) Aminotran_1_2 PF00155.21 NODE_59190_length_281_cov_5.345528_g51250_i0reverse_frame_2 - 7.7e-25 87.8 0.0 8e-25 87.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aconitase_C PF00694.19 NODE_59190_length_281_cov_5.345528_g51250_i0reverse_frame_2 - 0.21 11.9 0.0 0.23 11.8 0.0 1.1 1 0 0 1 1 1 0 Aconitase C-terminal domain DUF2195 PF09961.9 NODE_59188_length_281_cov_11.491870_g51248_i0reverse_frame_2 - 0.032 14.2 0.3 0.038 13.9 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2195) DUF4716 PF15837.5 NODE_59187_length_281_cov_38.304878_g51247_i0forward_frame_2 - 0.14 12.3 4.1 0.24 11.5 4.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4716) DNA_RNApol_7kD PF03604.13 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_3 - 0.022 14.5 0.2 0.022 14.5 0.2 1.7 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-AD PF07776.15 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_3 - 0.024 14.9 0.4 0.024 14.9 0.4 1.8 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) DUF3725 PF12523.8 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_3 - 0.053 13.8 3.1 0.2 11.9 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3725) zf-HYPF PF07503.12 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_3 - 0.17 11.7 0.2 0.17 11.7 0.2 2.8 3 0 0 3 3 3 0 HypF finger Ribosomal_S27e PF01667.17 NODE_59184_length_281_cov_43.044715_g51244_i0reverse_frame_3 - 1.9 8.3 5.3 0.95 9.2 1.3 2.3 2 0 0 2 2 2 0 Ribosomal protein S27 Nairovirus_M PF07948.11 NODE_59178_length_281_cov_67.601626_g51238_i0forward_frame_3 - 0.0065 14.8 0.2 0.0075 14.5 0.2 1.0 1 0 0 1 1 1 1 Nairovirus M polyprotein-like L_biotic_typeA PF04604.13 NODE_59177_length_281_cov_67.825203_g51237_i0reverse_frame_3 - 0.052 13.4 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 Type-A lantibiotic Rhomboid_SP PF12595.8 NODE_59173_length_281_cov_76.524390_g51233_i0forward_frame_2 - 0.073 12.4 1.2 0.081 12.3 1.2 1.3 1 1 0 1 1 1 0 Rhomboid serine protease Ribosomal_S18 PF01084.20 NODE_59169_length_281_cov_81.024390_g51229_i0forward_frame_3 - 0.051 13.8 0.2 0.078 13.2 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein S18 TPT PF03151.16 NODE_59168_length_281_cov_83.666667_g51228_i0forward_frame_3 - 0.098 12.0 0.1 0.22 10.9 0.1 1.5 1 1 1 2 2 2 0 Triose-phosphate Transporter family DUF3343 PF11823.8 NODE_59168_length_281_cov_83.666667_g51228_i0forward_frame_3 - 0.14 11.7 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) VAD1-2 PF15310.6 NODE_59167_length_281_cov_93.678862_g51227_i0forward_frame_2 - 0.019 14.8 1.0 0.023 14.6 1.0 1.1 1 0 0 1 1 1 0 Vitamin A-deficiency (VAD) rat model signalling DUF4501 PF14946.6 NODE_59166_length_281_cov_97.979675_g51226_i0forward_frame_3 - 0.24 11.4 6.5 0.27 11.3 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) IBV_3A PF03617.13 NODE_59166_length_281_cov_97.979675_g51226_i0forward_frame_2 - 0.033 14.2 0.6 0.046 13.7 0.6 1.3 1 0 0 1 1 1 0 IBV 3A protein DUF2207 PF09972.9 NODE_59165_length_281_cov_111.203252_g51225_i0reverse_frame_3 - 3 6.5 12.8 3.5 6.3 12.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Casc1 PF12366.8 NODE_59165_length_281_cov_111.203252_g51225_i0forward_frame_2 - 1.7 8.1 10.6 0.94 9.0 8.9 1.4 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 TMEM72 PF16054.5 NODE_59163_length_281_cov_116.434959_g51223_i0forward_frame_2 - 5.9 6.6 8.3 7 6.3 8.3 1.0 1 0 0 1 1 1 0 Transmembrane protein family 72 DUF2065 PF09838.9 NODE_59161_length_281_cov_122.817073_g51221_i0forward_frame_2 - 0.096 12.7 1.4 1.5 8.9 0.2 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) PGA_cap PF09587.10 NODE_59160_length_281_cov_124.715447_g51220_i0reverse_frame_2 - 0.048 13.1 0.0 0.049 13.1 0.0 1.0 1 0 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap INSC_LBD PF16748.5 NODE_59160_length_281_cov_124.715447_g51220_i0forward_frame_2 - 0.065 12.7 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Inscuteable LGN-binding domain Toxin_23 PF08093.11 NODE_59157_length_281_cov_138.837398_g51217_i0forward_frame_3 - 8.6 6.6 19.1 0.26 11.5 5.4 2.9 2 1 0 2 2 2 0 Magi 5 toxic peptide family Inhibitor_I71 PF12628.7 NODE_59155_length_281_cov_148.743902_g51215_i0forward_frame_2 - 0.083 12.7 0.0 0.098 12.5 0.0 1.1 1 0 0 1 1 1 0 Falstatin, cysteine peptidase inhibitor PTS_EIIB PF00367.20 NODE_59154_length_281_cov_152.069106_g51214_i0forward_frame_2 - 0.14 11.7 0.1 0.2 11.2 0.1 1.2 1 0 0 1 1 1 0 phosphotransferase system, EIIB CCB1 PF12046.8 NODE_59152_length_281_cov_184.776423_g51212_i0forward_frame_3 - 0.065 12.6 4.9 0.079 12.3 4.9 1.1 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B TarH PF02203.15 NODE_59152_length_281_cov_184.776423_g51212_i0forward_frame_3 - 3.9 7.4 4.6 4.9 7.0 4.6 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue DUF3272 PF11676.8 NODE_59152_length_281_cov_184.776423_g51212_i0forward_frame_2 - 0.062 13.6 0.6 0.11 12.7 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3272) Pox_TAA1 PF03295.14 NODE_59151_length_281_cov_189.821138_g51211_i0reverse_frame_2 - 0.12 12.2 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Poxvirus trans-activator protein A1 C-terminal DUF5542 PF17696.1 NODE_59150_length_281_cov_199.792683_g51210_i0forward_frame_3 - 0.42 10.8 1.7 1.4 9.1 0.2 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5542) zinc_ribbon_9 PF14369.6 NODE_59148_length_281_cov_230.821138_g51208_i0forward_frame_3 - 0.22 11.8 1.0 0.22 11.8 1.0 1.9 2 0 0 2 2 2 0 zinc-ribbon DUF35_N PF12172.8 NODE_59147_length_281_cov_323.036585_g51207_i0forward_frame_2 - 7.9e-05 22.4 0.8 0.00013 21.7 0.8 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF1090 PF06476.12 NODE_59140_length_282_cov_0.967611_g51200_i0forward_frame_2 - 0.66 10.1 19.8 0.35 11.0 6.1 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF1090) DUF2203 PF09969.9 NODE_59140_length_282_cov_0.967611_g51200_i0forward_frame_2 - 8.5 7.1 9.6 11 6.7 9.6 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF1356 PF07092.12 NODE_59139_length_282_cov_0.967611_g51199_i0forward_frame_2 - 0.042 13.1 0.5 0.047 13.0 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) DUF1106 PF06523.11 NODE_59139_length_282_cov_0.967611_g51199_i0forward_frame_2 - 0.33 11.0 1.3 0.37 10.9 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1106) DUF4253 PF14062.6 NODE_59137_length_282_cov_1.076923_g51197_i0forward_frame_3 - 0.014 15.6 0.4 0.016 15.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) DUF4258 PF14076.6 NODE_59137_length_282_cov_1.076923_g51197_i0forward_frame_3 - 0.046 14.1 0.0 0.082 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4258) SAM_4 PF18017.1 NODE_59131_length_282_cov_1.259109_g51191_i0reverse_frame_3 - 0.15 12.0 0.6 5.7 7.0 0.3 2.0 1 1 1 2 2 2 0 SAM domain (Sterile alpha motif) Remorin_C PF03763.13 NODE_59131_length_282_cov_1.259109_g51191_i0reverse_frame_2 - 0.013 15.3 4.1 0.015 15.2 4.1 1.2 1 1 0 1 1 1 0 Remorin, C-terminal region zf_C2H2_13 PF18508.1 NODE_59129_length_282_cov_1.283401_g51189_i0reverse_frame_3 - 3.2 7.4 5.3 18 5.0 1.7 2.1 2 0 0 2 2 2 0 Zinc finger domain LolA_like PF17131.4 NODE_59127_length_282_cov_1.299595_g51187_i0reverse_frame_3 - 0.0035 17.1 1.3 0.0041 16.9 1.3 1.1 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein HSA PF07529.13 NODE_59126_length_282_cov_1.331984_g51186_i0reverse_frame_3 - 0.0035 17.6 0.1 0.006 16.9 0.1 1.3 1 0 0 1 1 1 1 HSA Pkinase PF00069.25 NODE_59126_length_282_cov_1.331984_g51186_i0reverse_frame_2 - 7.5e-05 22.2 0.0 0.00011 21.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain HTH_52 PF18576.1 NODE_59126_length_282_cov_1.331984_g51186_i0forward_frame_3 - 0.099 12.9 0.1 7.5 6.8 0.0 2.1 1 1 1 2 2 2 0 Helix-turn-helix domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks287.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks287.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks287.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks287.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5345 PF17280.2 NODE_59117_length_282_cov_1.582996_g51177_i0forward_frame_2 - 0.045 13.7 1.1 0.068 13.2 1.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5345) Ion_trans PF00520.31 NODE_59116_length_282_cov_1.607287_g51176_i0reverse_frame_2 - 2.1e-07 30.5 4.4 2.3e-07 30.3 4.4 1.0 1 0 0 1 1 1 1 Ion transport protein TetR PF13972.6 NODE_59113_length_282_cov_1.655870_g51173_i0forward_frame_3 - 0.012 15.4 0.0 0.013 15.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial transcriptional repressor DB_JBP1 PF18526.1 NODE_59100_length_282_cov_1.829960_g51160_i0reverse_frame_2 - 0.19 11.7 0.0 0.25 11.3 0.0 1.3 1 1 0 1 1 1 0 Thymine dioxygenase JBP1 DNA-binding domain Dehydratase_MU PF02288.15 NODE_59095_length_282_cov_1.971660_g51155_i0forward_frame_3 - 0.069 13.0 0.0 0.077 12.9 0.0 1.1 1 0 0 1 1 1 0 Dehydratase medium subunit WBP-1 PF11669.8 NODE_59095_length_282_cov_1.971660_g51155_i0forward_frame_2 - 0.06 14.0 7.2 0.07 13.8 7.2 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 DHHC PF01529.20 NODE_59094_length_282_cov_1.983806_g51154_i0forward_frame_3 - 2.4e-26 92.4 9.4 2.7e-26 92.3 9.4 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase DHHC PF01529.20 NODE_59091_length_282_cov_2.101215_g51151_i0reverse_frame_2 - 9.5 6.3 9.7 12 6.1 9.7 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase PMBR PF09373.10 NODE_59090_length_282_cov_2.109312_g51150_i0reverse_frame_2 - 0.37 11.0 2.7 3.1 8.1 0.3 2.8 2 1 1 3 3 3 0 Pseudomurein-binding repeat TRIC PF05197.13 NODE_59090_length_282_cov_2.109312_g51150_i0forward_frame_3 - 2.1 7.9 6.5 1.6 8.3 0.5 2.0 1 1 1 2 2 2 0 TRIC channel SCVP PF17619.2 NODE_59084_length_282_cov_2.267206_g51144_i0reverse_frame_3 - 0.064 14.1 0.4 7.3 7.5 0.1 2.0 1 1 1 2 2 2 0 Secreted clade V proteins IL13 PF03487.13 NODE_59083_length_282_cov_2.271255_g51143_i0reverse_frame_3 - 0.048 13.4 1.1 0.056 13.2 1.1 1.1 1 0 0 1 1 1 0 Interleukin-13 CCER1 PF15482.6 NODE_59082_length_282_cov_2.291498_g51142_i0reverse_frame_2 - 0.11 12.4 0.1 0.11 12.4 0.1 1.4 2 0 0 2 2 2 0 Coiled-coil domain-containing glutamate-rich protein family 1 Suppressor_P21 PF11479.8 NODE_59080_length_282_cov_2.303644_g51140_i0reverse_frame_3 - 0.11 12.7 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 RNA silencing suppressor P21 C-terminal domain DUF2512 PF10710.9 NODE_59078_length_282_cov_2.340081_g51138_i0reverse_frame_3 - 0.0087 15.7 0.1 0.0098 15.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2512) Pkinase PF00069.25 NODE_59078_length_282_cov_2.340081_g51138_i0forward_frame_2 - 5.8e-15 55.4 0.0 6.2e-15 55.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_59078_length_282_cov_2.340081_g51138_i0forward_frame_2 - 3.6e-09 36.3 0.0 4.3e-09 36.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase HMw1_D2 PF18254.1 NODE_59077_length_282_cov_2.368421_g51137_i0reverse_frame_2 - 0.082 13.3 1.0 0.087 13.2 0.1 1.7 2 1 0 2 2 2 0 HMW1 domain 2 TTR-52 PF01060.23 NODE_59076_length_282_cov_2.372470_g51136_i0forward_frame_3 - 0.012 16.3 0.2 0.024 15.3 0.2 1.6 1 1 0 1 1 1 0 Transthyretin-like family Baculo_11_kDa PF06143.11 NODE_59073_length_282_cov_2.497976_g51133_i0reverse_frame_2 - 0.53 9.9 5.4 0.7 9.5 5.4 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family Pex24p PF06398.11 NODE_59073_length_282_cov_2.497976_g51133_i0reverse_frame_2 - 0.82 8.6 4.4 0.89 8.5 4.4 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin NYD-SP28 PF14772.6 NODE_59071_length_282_cov_2.542510_g51131_i0forward_frame_3 - 0.0078 16.3 2.0 0.011 15.8 1.6 1.4 1 1 0 1 1 1 1 Sperm tail Lar_N PF09861.9 NODE_59071_length_282_cov_2.542510_g51131_i0forward_frame_3 - 0.015 14.5 0.6 0.017 14.3 0.6 1.1 1 0 0 1 1 1 0 Lactate racemase N-terminal domain DrrA_P4M PF14860.6 NODE_59071_length_282_cov_2.542510_g51131_i0forward_frame_3 - 0.038 13.8 0.9 0.06 13.2 0.9 1.3 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain TPR_20 PF14561.6 NODE_59071_length_282_cov_2.542510_g51131_i0forward_frame_3 - 0.041 14.2 0.3 0.066 13.5 0.2 1.4 1 1 0 1 1 1 0 Tetratricopeptide repeat Dfp1_Him1_M PF08630.10 NODE_59071_length_282_cov_2.542510_g51131_i0forward_frame_3 - 0.047 13.9 2.4 0.065 13.4 0.7 1.8 1 1 1 2 2 2 0 Dfp1/Him1, central region CathepsinC_exc PF08773.11 NODE_59064_length_282_cov_2.708502_g51124_i0reverse_frame_2 - 0.075 13.3 0.1 0.078 13.2 0.1 1.1 1 0 0 1 1 1 0 Cathepsin C exclusion domain Surp PF01805.20 NODE_59060_length_282_cov_2.991903_g51120_i0reverse_frame_2 - 5.2e-10 39.2 0.3 1.1e-09 38.2 0.3 1.5 1 0 0 1 1 1 1 Surp module SPC25 PF06703.11 NODE_59059_length_282_cov_3.056680_g51119_i0reverse_frame_3 - 0.63 9.8 8.2 0.68 9.7 8.2 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Aldedh PF00171.22 NODE_59058_length_282_cov_3.064777_g51118_i0reverse_frame_3 - 3.4e-09 35.7 0.2 4e-09 35.5 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ALF PF03752.13 NODE_59058_length_282_cov_3.064777_g51118_i0reverse_frame_3 - 0.063 13.3 0.3 1.4 8.9 0.0 2.4 2 0 0 2 2 2 0 Short repeats of unknown function zf-GRF PF06839.12 NODE_59057_length_282_cov_3.105263_g51117_i0reverse_frame_3 - 0.058 13.5 0.3 18 5.5 0.0 3.0 1 1 1 2 2 2 0 GRF zinc finger zf-CCCH_2 PF14608.6 NODE_59057_length_282_cov_3.105263_g51117_i0reverse_frame_3 - 0.4 11.2 4.2 20 5.8 0.1 3.1 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger SPDY PF03771.16 NODE_59057_length_282_cov_3.105263_g51117_i0forward_frame_3 - 0.085 12.8 0.2 0.26 11.2 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF317) SPOR PF05036.13 NODE_59057_length_282_cov_3.105263_g51117_i0forward_frame_3 - 2.7 8.5 4.3 45 4.5 0.1 3.0 1 1 2 3 3 3 0 Sporulation related domain PHR PF08005.12 NODE_59056_length_282_cov_3.121457_g51116_i0forward_frame_3 - 8.6e-06 26.5 0.8 1.2e-05 26.0 0.8 1.3 1 0 0 1 1 1 1 PHR domain RE_R_Pab1 PF09522.10 NODE_59056_length_282_cov_3.121457_g51116_i0forward_frame_3 - 0.02 15.0 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 R.Pab1 restriction endonuclease LapA_dom PF06305.11 NODE_59055_length_282_cov_3.145749_g51115_i0forward_frame_3 - 0.052 13.4 0.1 0.073 12.9 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain CLZ PF16526.5 NODE_59055_length_282_cov_3.145749_g51115_i0forward_frame_3 - 0.056 13.8 0.1 0.096 13.1 0.1 1.4 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DHHC PF01529.20 NODE_59055_length_282_cov_3.145749_g51115_i0forward_frame_3 - 0.067 13.3 0.7 0.083 13.0 0.4 1.3 1 1 0 1 1 1 0 DHHC palmitoyltransferase SipA_VBS PF17985.1 NODE_59055_length_282_cov_3.145749_g51115_i0forward_frame_3 - 0.074 13.0 0.9 0.16 11.9 0.9 1.5 1 0 0 1 1 1 0 SipA vinculin binding site Tsc35 PF15079.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_3 - 0.14 11.7 0.9 0.14 11.8 0.9 1.1 1 0 0 1 1 1 0 Testis-specific protein 35 HTH_3 PF01381.22 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 3.6e-15 55.8 0.4 4.4e-15 55.5 0.4 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 3.1e-11 43.4 0.0 4.3e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 2.2e-08 34.0 0.0 2.7e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 6.5e-05 22.8 0.5 0.00013 21.9 0.5 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.00035 20.7 0.0 0.00046 20.3 0.0 1.1 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_26 PF13443.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.00037 20.9 0.0 0.00052 20.4 0.0 1.2 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.0017 18.2 0.1 0.0022 17.8 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Histone_HNS PF00816.21 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.042 14.7 0.0 0.067 14.0 0.0 1.5 1 1 0 1 1 1 0 H-NS histone family HTH_24 PF13412.6 NODE_59054_length_282_cov_3.331984_g51114_i0reverse_frame_2 - 0.069 12.7 0.4 0.15 11.6 0.4 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Ku_PK_bind PF08785.11 NODE_59050_length_282_cov_4.161943_g51110_i0reverse_frame_2 - 0.059 13.5 0.7 0.07 13.3 0.7 1.3 1 1 0 1 1 1 0 Ku C terminal domain like XK-related PF09815.9 NODE_59046_length_282_cov_7.311741_g51106_i0forward_frame_2 - 0.048 12.7 0.5 0.049 12.7 0.5 1.0 1 0 0 1 1 1 0 XK-related protein zf-TFIIB PF13453.6 NODE_59036_length_282_cov_54.356275_g51096_i0forward_frame_3 - 0.059 12.7 0.2 0.089 12.1 0.2 1.3 1 0 0 1 1 1 0 Transcription factor zinc-finger FERM_F2 PF18377.1 NODE_59035_length_282_cov_54.400810_g51095_i0reverse_frame_2 - 0.049 13.6 0.0 0.068 13.1 0.0 1.2 1 0 0 1 1 1 0 FERM F2 acyl-CoA binding protein-like domain ATP-synt_C PF00137.21 NODE_59033_length_282_cov_56.214575_g51093_i0forward_frame_2 - 0.027 14.8 1.7 0.062 13.6 1.4 1.9 1 1 1 2 2 2 0 ATP synthase subunit C ICMT PF04140.14 NODE_59031_length_282_cov_58.979757_g51091_i0reverse_frame_3 - 0.02 15.3 1.5 0.03 14.7 1.5 1.3 1 0 0 1 1 1 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Histone_H2A_C PF16211.5 NODE_59031_length_282_cov_58.979757_g51091_i0forward_frame_2 - 0.14 11.9 1.1 0.28 11.0 1.1 1.5 1 0 0 1 1 1 0 C-terminus of histone H2A IDO PF01231.18 NODE_59030_length_282_cov_61.668016_g51090_i0reverse_frame_2 - 0.0002 20.3 0.0 0.00021 20.2 0.0 1.1 1 0 0 1 1 1 1 Indoleamine 2,3-dioxygenase DUF2684 PF10885.8 NODE_59029_length_282_cov_62.004049_g51089_i0reverse_frame_3 - 7.8 6.7 8.8 8.3 6.6 8.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2684) G10 PF01125.17 NODE_59029_length_282_cov_62.004049_g51089_i0forward_frame_2 - 0.0015 18.3 0.2 0.0026 17.6 0.1 1.5 1 1 0 1 1 1 1 G10 protein Mt_ATP-synt_B PF05405.14 NODE_59028_length_282_cov_64.125506_g51088_i0reverse_frame_3 - 0.83 9.3 2.9 1.2 8.8 2.9 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) SWIRM-assoc_1 PF16495.5 NODE_59028_length_282_cov_64.125506_g51088_i0forward_frame_2 - 3.4e-09 36.5 1.6 3.4e-09 36.5 1.6 1.4 2 0 0 2 2 2 1 SWIRM-associated region 1 FliJ PF02050.16 NODE_59028_length_282_cov_64.125506_g51088_i0forward_frame_2 - 0.023 14.9 5.3 0.031 14.5 5.3 1.2 1 0 0 1 1 1 0 Flagellar FliJ protein DUF16 PF01519.16 NODE_59028_length_282_cov_64.125506_g51088_i0forward_frame_2 - 1.7 9.1 10.1 0.25 11.8 3.5 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF2459 PF09601.10 NODE_59027_length_282_cov_64.493927_g51087_i0forward_frame_2 - 0.05 13.4 0.5 0.067 13.0 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2459) MDM10 PF12519.8 NODE_59026_length_282_cov_65.497976_g51086_i0forward_frame_2 - 0.092 11.6 0.4 0.11 11.3 0.4 1.1 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 SUFU_C PF12470.8 NODE_59025_length_282_cov_65.955466_g51085_i0reverse_frame_3 - 0.15 12.1 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Suppressor of Fused Gli/Ci N terminal binding domain CNOT1_TTP_bind PF16417.5 NODE_59025_length_282_cov_65.955466_g51085_i0reverse_frame_2 - 0.01 15.0 0.0 0.011 14.9 0.0 1.0 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Baculo_VP1054 PF05789.11 NODE_59025_length_282_cov_65.955466_g51085_i0forward_frame_2 - 0.00072 18.9 0.1 0.00082 18.7 0.1 1.1 1 0 0 1 1 1 1 Baculovirus VP1054 protein Latarcin PF10279.9 NODE_59021_length_282_cov_75.502024_g51081_i0reverse_frame_3 - 0.095 13.1 0.1 0.099 13.1 0.1 1.2 1 0 0 1 1 1 0 Latarcin precursor CBM_14 PF01607.24 NODE_59021_length_282_cov_75.502024_g51081_i0reverse_frame_2 - 0.36 11.0 5.1 2.3 8.5 0.4 2.2 2 0 0 2 2 2 0 Chitin binding Peritrophin-A domain UBA PF00627.31 NODE_59017_length_282_cov_81.550607_g51077_i0forward_frame_2 - 6.9e-09 35.4 0.0 1.2e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 UBA/TS-N domain HSM3_C PF18794.1 NODE_59017_length_282_cov_81.550607_g51077_i0forward_frame_2 - 0.05 13.2 0.0 0.059 12.9 0.0 1.0 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain zf-RING_2 PF13639.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 7.6e-14 51.8 5.8 1.2e-13 51.2 5.8 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 9.4e-10 38.1 3.8 9.4e-10 38.1 3.8 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 9.1e-09 35.2 1.6 1.7e-08 34.4 1.6 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 1.3e-08 35.0 8.4 1.4e-07 31.7 8.4 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 1.5e-08 34.3 6.1 3.4e-08 33.2 6.1 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 9.5e-08 31.9 4.1 1.5e-07 31.2 4.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 2e-07 30.8 5.6 2e-07 30.8 5.6 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 2.8e-07 30.3 3.3 4.6e-07 29.6 3.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 2.4e-05 24.4 4.1 4.6e-05 23.5 4.1 1.5 1 0 0 1 1 1 1 RING-variant domain Prok-RING_4 PF14447.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.00011 22.0 6.7 0.002 17.9 7.5 2.1 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-UDP PF14569.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.00012 22.1 0.6 0.00016 21.7 0.6 1.2 1 0 0 1 1 1 1 Zinc-binding RING-finger zf-ANAPC11 PF12861.7 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.00021 21.3 3.5 0.00037 20.5 3.5 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.00028 20.5 4.8 0.00078 19.0 4.7 1.8 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.00055 20.1 7.3 0.0049 17.0 5.5 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain Baculo_RING PF05883.11 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.0015 18.5 0.9 0.0019 18.2 0.9 1.3 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4_4 PF15227.6 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 0.069 13.3 4.7 1.1 9.5 4.7 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-C3H2C3 PF17122.5 NODE_59015_length_282_cov_91.728745_g51075_i0reverse_frame_2 - 6.2 7.0 9.5 0.33 11.0 3.3 2.1 2 1 0 2 2 2 0 Zinc-finger OTU PF02338.19 NODE_59014_length_282_cov_103.028340_g51074_i0forward_frame_2 - 0.14 12.7 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 OTU-like cysteine protease Nudix_N_2 PF14803.6 NODE_59012_length_282_cov_107.068826_g51072_i0forward_frame_2 - 0.0075 16.2 0.7 0.014 15.3 0.2 1.7 2 0 0 2 2 2 1 Nudix N-terminal Jacalin PF01419.17 NODE_59010_length_282_cov_109.356275_g51070_i0reverse_frame_3 - 8.6e-07 29.0 0.1 1.2e-06 28.5 0.1 1.2 1 0 0 1 1 1 1 Jacalin-like lectin domain ABC2_membrane_2 PF12679.7 NODE_59010_length_282_cov_109.356275_g51070_i0forward_frame_3 - 0.12 11.7 0.6 0.12 11.6 0.6 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein AP3D1 PF06375.11 NODE_59008_length_282_cov_119.449393_g51068_i0reverse_frame_3 - 1.9 8.7 13.8 2.8 8.2 13.8 1.3 1 1 0 1 1 1 0 AP-3 complex subunit delta-1 Colicin_im PF03857.13 NODE_59006_length_282_cov_122.295547_g51066_i0reverse_frame_3 - 0.031 14.2 0.3 0.042 13.8 0.3 1.2 1 0 0 1 1 1 0 Colicin immunity protein YabA PF06156.13 NODE_59003_length_282_cov_162.914980_g51063_i0forward_frame_3 - 0.015 15.9 0.1 0.018 15.7 0.1 1.1 1 0 0 1 1 1 0 Initiation control protein YabA TSC22 PF01166.18 NODE_59003_length_282_cov_162.914980_g51063_i0forward_frame_3 - 0.026 14.8 0.5 0.036 14.4 0.5 1.3 1 0 0 1 1 1 0 TSC-22/dip/bun family ZapB PF06005.12 NODE_59003_length_282_cov_162.914980_g51063_i0forward_frame_3 - 0.052 14.0 0.2 0.077 13.4 0.2 1.2 1 0 0 1 1 1 0 Cell division protein ZapB bZIP_1 PF00170.21 NODE_59003_length_282_cov_162.914980_g51063_i0forward_frame_3 - 0.092 12.9 0.2 0.15 12.1 0.2 1.3 1 0 0 1 1 1 0 bZIP transcription factor NifU PF01106.17 NODE_58999_length_282_cov_240.076923_g51059_i0reverse_frame_3 - 0.98 9.6 2.6 1.7 8.9 2.6 1.3 1 0 0 1 1 1 0 NifU-like domain DUF1375 PF07119.12 NODE_58999_length_282_cov_240.076923_g51059_i0forward_frame_3 - 0.11 12.9 0.7 0.41 11.1 0.7 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1375) Metallothio PF00131.20 NODE_58997_length_282_cov_286.684211_g51057_i0forward_frame_2 - 4.3 7.5 10.5 4.7 7.4 3.1 2.2 2 0 0 2 2 2 0 Metallothionein DUF4274 PF14096.6 NODE_58995_length_282_cov_369.797571_g51056_i0forward_frame_2 - 0.21 11.6 0.0 0.29 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4274) PHD PF00628.29 NODE_58994_length_282_cov_445.510121_g51055_i0forward_frame_3 - 0.005 16.7 0.7 0.011 15.6 0.7 1.6 1 0 0 1 1 1 1 PHD-finger HMG_box PF00505.19 NODE_58993_length_282_cov_6839.570850_g51054_i0forward_frame_3 - 2.2e-15 56.8 1.9 2.8e-15 56.5 1.9 1.1 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_58993_length_282_cov_6839.570850_g51054_i0forward_frame_3 - 1.5e-08 35.1 1.2 1.9e-08 34.8 1.2 1.1 1 0 0 1 1 1 1 HMG-box domain ASXH PF13919.6 NODE_58993_length_282_cov_6839.570850_g51054_i0forward_frame_3 - 0.0047 16.9 0.0 0.006 16.6 0.0 1.1 1 0 0 1 1 1 1 Asx homology domain DUF2582 PF10771.9 NODE_58993_length_282_cov_6839.570850_g51054_i0forward_frame_3 - 0.0086 16.2 0.0 0.014 15.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix domain (DUF2582) Rhabdo_NV PF02484.15 ORF99159 - 0.13 12.4 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Rhabdovirus Non-virion protein zf-C2H2 PF00096.26 ORF99119 - 2.2e-05 24.7 9.9 0.00012 22.3 5.9 2.2 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF99119 - 0.00017 22.1 8.1 0.00022 21.8 4.3 2.2 2 0 0 2 2 2 1 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF99119 - 0.0014 18.9 7.1 0.0084 16.5 2.2 2.3 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_6 PF13912.6 ORF99119 - 0.0029 17.6 2.8 0.0029 17.6 2.8 2.1 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_2 PF12756.7 ORF99119 - 0.0042 17.4 0.7 0.0055 17.0 0.7 1.3 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-BED PF02892.15 ORF99119 - 0.0072 16.3 5.8 0.0082 16.1 5.2 1.5 1 1 0 1 1 1 1 BED zinc finger DUF2547 PF10818.8 ORF99119 - 0.044 14.7 0.1 0.05 14.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) zf-H2C2_5 PF13909.6 ORF99119 - 0.38 10.6 11.6 0.27 11.0 6.9 2.3 2 0 0 2 2 2 0 C2H2-type zinc-finger domain Agouti PF05039.12 ORF97955 - 0.12 13.1 0.5 0.12 13.1 0.5 1.8 1 1 0 1 1 1 0 Agouti protein TMIE PF16038.5 ORF97144 - 0.13 12.1 2.9 0.37 10.7 2.9 1.7 1 1 0 1 1 1 0 TMIE protein Fz PF01392.22 ORF97075 - 0.012 16.2 0.6 0.013 16.1 0.6 1.1 1 0 0 1 1 1 0 Fz domain Herpeto_peptide PF14409.6 ORF96519 - 2.7 8.3 4.4 26 5.2 0.5 2.3 1 1 1 2 2 2 0 Ribosomally synthesized peptide in Herpetosiphon Spec3 PF15795.5 ORF95118 - 7.7e-13 48.8 16.3 1e-10 42.0 16.3 2.1 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein zf-DNA_Pol PF08996.10 ORF95109 - 0.012 15.4 0.3 0.013 15.2 0.3 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger DUF3311 PF11755.8 ORF94779 - 0.055 13.4 0.2 0.055 13.4 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3311) TIL PF01826.17 ORF94769 - 0.43 10.9 3.8 1.9 8.8 0.8 2.3 2 1 0 2 2 2 0 Trypsin Inhibitor like cysteine rich domain Phos_pyr_kin PF08543.12 ORF94638 - 0.086 12.2 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase DUF3959 PF13105.6 ORF94427 - 0.038 13.5 0.2 0.039 13.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) RNA_pol_Rpc4 PF05132.14 ORF93655 - 0.19 12.2 0.3 1 9.8 0.3 1.9 1 1 0 1 1 1 0 RNA polymerase III RPC4 VWA_N2 PF16164.5 ORF92707 - 0.89 9.7 5.7 2.9 8.1 0.4 2.1 1 1 1 2 2 2 0 VWA N-terminal Peptidase_M41 PF01434.18 ORF92008 - 2.8e-08 33.8 0.3 3.3e-08 33.6 0.3 1.1 1 0 0 1 1 1 1 Peptidase family M41 GPCR_chapero_1 PF11904.8 ORF92008 - 0.076 12.4 0.3 0.09 12.2 0.3 1.0 1 0 0 1 1 1 0 GPCR-chaperone CTU2 PF10288.9 ORF91488 - 0.011 16.0 0.6 0.013 15.8 0.6 1.2 1 0 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 CDRT4 PF15213.6 ORF91488 - 0.025 15.2 0.3 0.027 15.1 0.3 1.0 1 0 0 1 1 1 0 CMT1A duplicated region transcript 4 protein CBP4 PF07960.11 ORF91488 - 0.054 13.3 1.3 0.088 12.7 1.3 1.5 1 1 0 1 1 1 0 CBP4 DUF4051 PF13260.6 ORF91398 - 0.091 12.5 2.3 0.41 10.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) DNA_pol3_a_NII PF11490.8 ORF90438 - 0.0078 16.1 0.8 0.0089 15.9 0.8 1.2 1 0 0 1 1 1 1 DNA polymerase III polC-type N-terminus II Fz PF01392.22 ORF88286 - 0.012 16.2 0.6 0.013 16.1 0.6 1.1 1 0 0 1 1 1 0 Fz domain MOSC PF03473.17 ORF88104 - 1.6e-07 31.4 0.1 2e-07 31.1 0.1 1.1 1 0 0 1 1 1 1 MOSC domain PSI_integrin PF17205.3 ORF88104 - 0.055 13.2 0.3 0.12 12.2 0.3 1.6 1 0 0 1 1 1 0 Integrin plexin domain Rotavirus_VP7 PF05868.11 ORF88104 - 0.077 12.4 0.0 0.094 12.1 0.0 1.1 1 0 0 1 1 1 0 Rotavirus major outer capsid protein VP7 CxC3 PF18804.1 ORF87917 - 0.035 14.0 0.3 0.052 13.4 0.3 1.2 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases HCV_NS5a PF01506.19 ORF86595 - 0.038 13.8 0.9 0.067 13.1 0.9 1.4 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a protein membrane anchor Pribosyltran PF00156.27 ORF86490 - 0.0013 18.3 0.2 0.0021 17.6 0.2 1.5 1 1 0 1 1 1 1 Phosphoribosyl transferase domain TAF4 PF05236.14 ORF86490 - 0.0048 16.7 0.0 0.0048 16.7 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID component TAF4 family GTP_cyclohydro2 PF00925.20 ORF86490 - 0.13 11.9 0.5 0.44 10.1 0.2 1.7 1 1 1 2 2 2 0 GTP cyclohydrolase II DUF3446 PF11928.8 ORF86410 - 7 7.0 14.4 0.72 10.2 9.9 1.6 1 1 1 2 2 2 0 Early growth response N-terminal domain KAR9 PF08580.10 ORF83701 - 1.8 7.0 7.1 2 6.8 7.1 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 Sensor PF13796.6 ORF83396 - 0.066 13.3 5.8 0.076 13.1 5.8 1.1 1 0 0 1 1 1 0 Putative sensor PsiF_repeat PF07769.14 ORF82403 - 0.093 12.6 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 psiF repeat Glyco_hydro_79n PF03662.14 ORF80667 - 0.36 9.7 1.6 0.41 9.5 1.6 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 79, N-terminal domain MmgE_PrpD PF03972.14 ORF79847 - 0.2 10.1 0.0 0.24 9.9 0.0 1.0 1 0 0 1 1 1 0 MmgE/PrpD family DUF5493 PF17597.2 ORF79767 - 0.052 13.8 0.2 0.5 10.6 0.2 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5493) Cytochrom_B558a PF05038.13 ORF79414 - 0.1 12.2 1.1 0.11 12.1 1.1 1.1 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit ChapFlgA_N PF17656.1 ORF79414 - 0.22 11.7 1.8 1.2 9.3 0.1 2.0 2 0 0 2 2 2 0 FlgA N-terminal domain TPR_12 PF13424.6 ORF79034 - 7.4e-08 32.6 0.0 2.9e-07 30.7 0.0 1.8 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF79034 - 2.4e-06 27.2 0.1 0.00077 19.3 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF79034 - 1.7e-05 24.5 0.0 0.089 12.7 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF79034 - 3e-05 24.6 0.0 0.00092 19.8 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF79034 - 0.00077 19.9 0.0 0.18 12.4 0.0 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat PPR_1 PF12854.7 ORF79034 - 0.0054 16.4 0.2 0.48 10.2 0.1 2.3 2 0 0 2 2 2 1 PPR repeat TPR_4 PF07721.14 ORF79034 - 0.006 17.1 0.1 6.7 7.7 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF79034 - 0.01 15.2 0.1 0.012 15.0 0.1 1.1 1 0 0 1 1 1 0 MalT-like TPR region TPR_1 PF00515.28 ORF79034 - 0.021 14.6 0.0 0.059 13.2 0.0 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat PPR PF01535.20 ORF79034 - 0.027 14.7 0.2 4.1 7.9 0.2 2.6 2 0 0 2 2 2 0 PPR repeat TPR_2 PF07719.17 ORF79034 - 0.043 13.9 0.2 0.52 10.6 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF79034 - 0.043 14.2 0.0 0.95 10.0 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF79034 - 0.047 14.5 0.1 1.5 9.9 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat RPN6_N PF18055.1 ORF79034 - 0.053 13.9 0.0 0.059 13.7 0.0 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN6 N-terminal domain TPR_8 PF13181.6 ORF79034 - 0.06 13.6 0.0 0.44 10.9 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat PGP_phosphatase PF09419.10 ORF79034 - 0.087 12.4 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase YjgF_endoribonc PF14588.6 ORF79034 - 0.11 12.6 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 YjgF/chorismate_mutase-like, putative endoribonuclease 14-3-3 PF00244.20 ORF79034 - 0.11 12.0 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 14-3-3 protein Pyr_redox_2 PF07992.14 ORF78636 - 0.00039 19.8 0.2 0.00039 19.8 0.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF78636 - 0.00094 18.5 0.1 0.001 18.4 0.1 1.1 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 ORF78636 - 0.0015 18.7 0.2 0.0026 18.0 0.2 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF78636 - 0.0033 16.7 0.1 0.005 16.1 0.1 1.2 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 ORF78636 - 0.0034 16.5 0.4 0.0035 16.5 0.4 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 ORF78636 - 0.0038 16.0 0.3 0.0049 15.6 0.3 1.1 1 0 0 1 1 1 1 HI0933-like protein AlaDh_PNT_C PF01262.21 ORF78636 - 0.028 13.7 0.2 0.03 13.6 0.2 1.0 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain GIDA PF01134.22 ORF78636 - 0.044 12.9 0.3 0.044 12.9 0.3 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 ORF78636 - 0.048 12.9 0.1 0.048 12.9 0.1 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MBG PF17883.1 ORF78636 - 0.18 12.5 0.0 0.19 12.4 0.0 1.2 1 0 0 1 1 1 0 MBG domain FAD_oxidored PF12831.7 ORF78636 - 0.26 10.6 1.3 0.36 10.1 1.3 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase PROL5-SMR PF15621.6 ORF78005 - 0.0075 16.8 1.9 0.009 16.5 1.9 1.2 1 0 0 1 1 1 1 Proline-rich submaxillary gland androgen-regulated family F-box PF00646.33 ORF77972 - 0.45 10.5 5.5 0.93 9.4 0.4 2.5 2 1 0 2 2 2 0 F-box domain DUSP PF06337.12 ORF7763 - 0.041 14.5 0.1 0.065 13.9 0.1 1.3 1 1 0 1 1 1 0 DUSP domain DUF4386 PF14329.6 ORF77138 - 0.044 13.7 0.4 0.044 13.7 0.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4386) Phage_pRha PF09669.10 ORF75687 - 0.089 13.4 2.1 0.12 12.9 2.1 1.1 1 0 0 1 1 1 0 Phage regulatory protein Rha (Phage_pRha) DNA_pol3_tau_5 PF12170.8 ORF74848 - 0.0013 18.8 0.3 0.0016 18.5 0.3 1.1 1 0 0 1 1 1 1 DNA polymerase III tau subunit V interacting with alpha DUF3392 PF11872.8 ORF74848 - 0.011 16.0 0.8 0.016 15.4 0.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3392) SPAN-X PF07458.12 ORF74848 - 0.32 11.5 3.3 1.1 9.7 0.4 2.0 1 1 1 2 2 2 0 Sperm protein associated with nucleus, mapped to X chromosome MORN PF02493.20 ORF74706 - 6e-26 88.8 16.4 3.1e-09 36.2 0.2 4.1 4 0 0 4 4 4 4 MORN repeat PCSK9_C2 PF18464.1 ORF74667 - 0.068 13.2 0.8 0.068 13.2 0.8 1.8 2 0 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain SAM_3 PF18016.1 ORF7452 - 0.052 13.4 0.0 0.073 12.9 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF4741 PF15897.5 ORF7452 - 0.13 12.1 0.2 0.15 11.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) CDRN PF05174.12 ORF74281 - 0.031 14.0 1.0 0.049 13.4 1.0 1.3 1 0 0 1 1 1 0 Cysteine-rich D. radiodurans N terminus Lyase_aromatic PF00221.19 ORF74281 - 0.11 11.1 0.3 0.12 11.0 0.3 1.0 1 0 0 1 1 1 0 Aromatic amino acid lyase Chromate_transp PF02417.15 ORF74224 - 0.03 14.5 0.1 0.034 14.3 0.1 1.1 1 0 0 1 1 1 0 Chromate transporter Cohesin_HEAT PF12765.7 ORF74092 - 0.12 12.7 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 HEAT repeat associated with sister chromatid cohesion Toxin_23 PF08093.11 ORF74092 - 0.15 12.2 2.9 0.26 11.5 2.9 1.4 1 0 0 1 1 1 0 Magi 5 toxic peptide family MHYT PF03707.16 ORF7159 - 0.078 13.2 0.2 0.11 12.7 0.2 1.3 1 0 0 1 1 1 0 Bacterial signalling protein N terminal repeat Acp26Ab PF05777.12 ORF7105 - 1 10.0 4.9 2.8 8.7 1.3 2.1 2 0 0 2 2 2 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) zf-Sec23_Sec24 PF04810.15 ORF70140 - 0.014 15.5 0.0 0.024 14.7 0.0 1.5 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger FAM178 PF14816.6 ORF69743 - 0.0084 15.1 0.1 0.0093 15.0 0.1 1.0 1 0 0 1 1 1 1 Family of unknown function, FAM178 ANKH PF07260.11 ORF69560 - 0.13 11.5 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Progressive ankylosis protein (ANKH) DUF3689 PF12463.8 ORF69312 - 0.001 18.4 1.5 0.0012 18.2 1.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3689) PPR_long PF17177.4 ORF69312 - 0.072 12.5 0.4 0.13 11.6 0.1 1.5 1 1 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP OTT_1508_deam PF14441.6 ORF66406 - 0.0025 17.8 0.2 0.0037 17.2 0.2 1.3 1 0 0 1 1 1 1 OTT_1508-like deaminase HTH_20 PF12840.7 ORF65732 - 0.25 11.4 1.7 0.32 11.1 0.2 1.9 2 1 0 2 2 2 0 Helix-turn-helix domain FeoB_associated PF12669.7 ORF65671 - 0.041 14.3 4.2 0.32 11.4 0.3 2.1 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein Fer4_9 PF13187.6 ORF65671 - 0.19 12.0 4.5 0.34 11.1 4.5 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain MORN PF02493.20 ORF65425 - 1.4e-10 40.4 22.5 1.3e-05 24.7 1.1 4.0 4 0 0 4 4 4 3 MORN repeat MORN_2 PF07661.13 ORF65425 - 0.23 11.8 0.1 0.23 11.8 0.1 3.6 5 1 0 5 5 5 0 MORN repeat variant DHC_N2 PF08393.13 ORF65269 - 0.0074 15.4 0.6 0.0081 15.3 0.6 1.1 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 Peptidase_S66C PF17676.1 ORF65269 - 0.035 14.6 0.0 0.041 14.4 0.0 1.1 1 0 0 1 1 1 0 LD-carboxypeptidase C-terminal domain DUF2073 PF09846.9 ORF65189 - 0.051 13.5 0.3 0.066 13.1 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2073) Vanabin-2 PF11437.8 ORF64207 - 0.098 12.8 8.4 0.064 13.4 6.3 1.6 2 0 0 2 2 2 0 Vanadium-binding protein 2 TIL PF01826.17 ORF64207 - 3.4 8.0 15.3 5.1 7.4 0.2 2.8 2 1 0 2 2 2 0 Trypsin Inhibitor like cysteine rich domain ShlB PF03865.13 ORF63679 - 0.036 13.5 0.0 0.042 13.3 0.0 1.1 1 0 0 1 1 1 0 Haemolysin secretion/activation protein ShlB/FhaC/HecB HMA PF00403.26 ORF63664 - 0.019 15.4 0.1 0.033 14.6 0.1 1.3 1 0 0 1 1 1 0 Heavy-metal-associated domain DUF4045 PF13254.6 ORF63664 - 0.029 14.0 0.8 0.035 13.8 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4045) Cadherin_C_2 PF16492.5 ORF63231 - 0.25 12.1 3.3 0.41 11.4 3.3 1.4 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal NEMO PF11577.8 ORF62763 - 0.03 14.3 0.0 0.053 13.5 0.0 1.5 1 0 0 1 1 1 0 NF-kappa-B essential modulator NEMO HECT PF00632.25 ORF62625 - 1e-12 48.2 0.1 1.2e-12 47.9 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) ISAV_HA PF06215.11 ORF62625 - 0.028 13.5 0.0 0.034 13.3 0.0 1.1 1 0 0 1 1 1 0 Infectious salmon anaemia virus haemagglutinin DUF4954 PF16314.5 ORF61829 - 0.016 13.4 2.5 0.016 13.4 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Acetate_kinase PF00871.17 ORF61829 - 0.024 13.4 1.5 0.025 13.3 1.5 1.0 1 0 0 1 1 1 0 Acetokinase family RNase_HII PF01351.18 ORF61829 - 0.29 11.0 4.0 0.35 10.7 4.0 1.1 1 0 0 1 1 1 0 Ribonuclease HII Fib_alpha PF08702.10 ORF61829 - 1 9.5 10.6 1.1 9.4 10.6 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family C5HCH PF17982.1 ORF61111 - 2.7 8.2 12.7 12 6.1 8.1 2.7 1 1 1 2 2 2 0 NSD Cys-His rich domain DAHP_synth_1 PF00793.20 ORF6111 - 3.8e-25 88.3 0.1 4.3e-25 88.1 0.1 1.0 1 0 0 1 1 1 1 DAHP synthetase I family NRD1_2 PF01995.16 ORF60995 - 0.079 12.2 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 NrpR regulatory domains NRD1 and 2 HECT PF00632.25 ORF59652 - 6.4e-12 45.6 0.1 7.6e-12 45.3 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Hydrolase_3 PF08282.12 ORF5946 - 0.013 15.2 0.0 0.016 15.0 0.0 1.0 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase FPV060 PF17614.2 ORF59271 - 0.35 10.2 3.9 0.41 10.0 3.9 1.0 1 0 0 1 1 1 0 Viral CC-type chemokine GTP_cyclohydroI PF01227.22 ORF59038 - 0.084 12.3 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase I DUF4064 PF13273.6 ORF58718 - 0.0047 17.2 0.2 0.0051 17.1 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) Kazal_3 PF18434.1 ORF57557 - 0.021 14.5 0.1 0.047 13.4 0.1 1.6 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain PRRSV_2b PF07069.11 ORF56702 - 0.066 13.7 0.4 0.094 13.2 0.4 1.2 1 0 0 1 1 1 0 Porcine reproductive and respiratory syndrome virus 2b DUF3953 PF13129.6 ORF56683 - 0.054 13.3 0.6 0.092 12.5 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3953) bZIP_1 PF00170.21 ORF56143 - 0.0011 19.0 6.4 0.03 14.4 1.4 2.8 2 1 0 2 2 2 2 bZIP transcription factor Shugoshin_N PF07558.11 ORF56143 - 0.0022 17.8 2.1 0.0022 17.8 2.1 2.1 2 0 0 2 2 2 1 Shugoshin N-terminal coiled-coil region YabA PF06156.13 ORF56143 - 0.0033 18.0 5.0 0.2 12.3 1.2 2.0 1 1 1 2 2 2 2 Initiation control protein YabA TSC22 PF01166.18 ORF56143 - 0.022 15.0 5.2 0.024 14.9 2.0 2.3 1 1 1 2 2 2 0 TSC-22/dip/bun family Fungal_TACC PF12709.7 ORF56143 - 0.079 13.4 3.8 2.6 8.6 1.4 2.3 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins NRBF2 PF08961.10 ORF56143 - 0.096 12.3 3.3 0.3 10.7 1.9 1.9 1 1 1 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator ZapB PF06005.12 ORF56143 - 0.12 12.8 4.5 1.1 9.7 3.1 2.3 1 1 1 2 2 2 0 Cell division protein ZapB Cep57_CLD_2 PF14197.6 ORF56143 - 0.16 12.1 3.7 1.3 9.2 0.8 2.2 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 Cnn_1N PF07989.11 ORF56143 - 0.18 12.0 4.7 15 5.9 2.7 2.6 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DivIC PF04977.15 ORF56143 - 0.24 11.2 2.4 2.8 7.8 0.4 2.3 2 1 0 2 2 2 0 Septum formation initiator TMF_DNA_bd PF12329.8 ORF56143 - 0.4 10.7 6.7 6.9 6.7 2.3 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding BofA PF07441.11 ORF55458 - 0.062 13.5 0.7 0.13 12.4 0.7 1.5 1 0 0 1 1 1 0 SigmaK-factor processing regulatory protein BofA Rotamase_3 PF13616.6 ORF55142 - 1.4e-20 74.0 0.0 1.6e-20 73.8 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.21 ORF55142 - 4.8e-20 72.3 0.0 6.8e-20 71.8 0.0 1.2 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF55142 - 0.00015 22.6 0.0 0.00016 22.5 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain DUF3413 PF11893.8 ORF54690 - 0.0061 15.8 6.7 0.0078 15.4 6.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3413) TMEM154 PF15102.6 ORF54690 - 0.036 14.0 0.7 0.05 13.5 0.7 1.2 1 0 0 1 1 1 0 TMEM154 protein family L_HMGIC_fpl PF10242.9 ORF54690 - 0.061 13.5 3.6 0.07 13.3 3.6 1.1 1 0 0 1 1 1 0 Lipoma HMGIC fusion partner-like protein ASFV_J13L PF05568.11 ORF54690 - 0.083 12.6 3.6 0.093 12.5 3.6 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Orf78 PF06024.12 ORF54690 - 0.11 12.8 1.7 0.15 12.4 1.7 1.3 1 0 0 1 1 1 0 Orf78 (ac78) FYDLN_acid PF09538.10 ORF54553 - 0.026 15.2 0.5 0.031 15.0 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) DUF309 PF03745.14 ORF54369 - 0.11 12.2 0.4 0.15 11.7 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF309) NDC10_II PF16787.5 ORF53424 - 0.015 14.4 0.1 0.018 14.1 0.1 1.0 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit, domain 2 Dicty_CAR PF05462.11 ORF53307 - 0.032 13.3 0.0 0.037 13.2 0.0 1.0 1 0 0 1 1 1 0 Slime mold cyclic AMP receptor LSM PF01423.22 ORF53063 - 3.9e-16 58.5 0.7 5.5e-16 58.0 0.7 1.3 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 ORF53063 - 0.0088 15.7 0.1 0.021 14.4 0.1 1.6 1 1 0 1 1 1 1 Hfq protein PRA1 PF03208.19 ORF52800 - 0.011 15.4 2.4 0.016 14.8 2.4 1.3 1 0 0 1 1 1 0 PRA1 family protein MORN PF02493.20 ORF52474 - 3.5e-17 61.2 17.8 4.4e-07 29.4 0.7 4.1 4 0 0 4 4 4 4 MORN repeat DUF3048_C PF17479.2 ORF52474 - 0.069 13.5 1.8 0.49 10.8 0.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain D_CNTX PF17492.2 ORF51973 - 0.061 13.5 4.0 0.62 10.3 0.3 2.8 3 0 0 3 3 3 0 Delta Ctenitoxins Acp26Ab PF05777.12 ORF51648 - 1 10.0 4.9 2.8 8.7 1.3 2.1 2 0 0 2 2 2 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) ADH_zinc_N_2 PF13602.6 ORF51575 - 1.7e-07 32.3 0.0 1.8e-07 32.3 0.0 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF3523 PF12037.8 ORF50838 - 0.021 14.2 22.6 0.024 14.0 22.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) IFRD_C PF04836.12 ORF50418 - 0.05 14.2 0.0 0.082 13.5 0.0 1.4 1 0 0 1 1 1 0 Interferon-related protein conserved region Pkinase PF00069.25 ORF50418 - 0.075 12.4 0.1 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 Protein kinase domain Phtf-FEM1B_bdg PF12129.8 ORF50321 - 0.19 11.5 2.4 0.21 11.4 1.9 1.3 1 1 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor TMEM191C PF15194.6 ORF50136 - 0.026 14.7 0.1 0.031 14.4 0.1 1.2 1 0 0 1 1 1 0 TMEM191C family zf-DNA_Pol PF08996.10 ORF48581 - 0.012 15.4 0.3 0.013 15.2 0.3 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger RtcB PF01139.17 ORF48491 - 6.9e-38 130.9 0.3 7.6e-38 130.8 0.3 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB SCAMP PF04144.13 ORF48448 - 0.0025 18.2 0.9 0.0026 18.1 0.9 1.1 1 0 0 1 1 1 1 SCAMP family Folate_rec PF03024.14 ORF48438 - 0.083 12.8 0.3 0.098 12.5 0.3 1.1 1 0 0 1 1 1 0 Folate receptor family CRAL_TRIO PF00650.20 ORF47216 - 3.2e-08 33.4 0.0 3.9e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain DLH PF01738.18 ORF46610 - 0.036 13.6 0.0 0.038 13.5 0.0 1.1 1 0 0 1 1 1 0 Dienelactone hydrolase family LIP PF03583.14 ORF46610 - 0.039 13.3 0.0 0.042 13.2 0.0 1.1 1 0 0 1 1 1 0 Secretory lipase Fz PF01392.22 ORF46601 - 0.012 16.2 0.6 0.013 16.1 0.6 1.1 1 0 0 1 1 1 0 Fz domain DAO PF01266.24 ORF46449 - 0.081 12.5 0.0 0.088 12.4 0.0 1.1 1 0 0 1 1 1 0 FAD dependent oxidoreductase NPR1_like_C PF12313.8 ORF46449 - 0.2 11.2 0.0 0.27 10.7 0.0 1.1 1 0 0 1 1 1 0 NPR1/NIM1 like defence protein C terminal DUF86 PF01934.17 ORF46024 - 0.051 13.4 0.1 0.06 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF86 Fox-1_C PF12414.8 ORF45446 - 0.13 12.7 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Calcitonin gene-related peptide regulator C terminal Fox-1_C PF12414.8 ORF45443 - 0.12 12.7 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Calcitonin gene-related peptide regulator C terminal Laminin_EGF PF00053.24 ORF44759 - 0.35 11.1 5.0 5.5 7.2 5.0 2.2 1 1 0 1 1 1 0 Laminin EGF domain Ephrin_rec_like PF07699.13 ORF44759 - 1.3 8.9 6.7 95 2.9 5.6 3.0 2 1 0 2 2 2 0 Putative ephrin-receptor like YwiC PF14256.6 ORF44692 - 0.2 12.0 9.8 0.28 11.5 9.8 1.3 1 0 0 1 1 1 0 YwiC-like protein DUF2420 PF10336.9 ORF44339 - 0.19 11.8 0.0 0.24 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) NUP50 PF08911.11 ORF43527 - 0.11 13.2 0.0 0.12 13.1 0.0 1.2 1 0 0 1 1 1 0 NUP50 (Nucleoporin 50 kDa) Dr_adhesin PF12393.8 ORF43527 - 9.9 6.6 6.8 2 8.8 0.7 2.3 2 0 0 2 2 2 0 Dr family adhesin KKLCAg1 PF15204.6 ORF4345 - 0.038 14.1 0.0 0.047 13.8 0.0 1.3 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 Transposase_1 PF01359.18 ORF43331 - 0.097 12.5 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Transposase (partial DDE domain) CENP-H PF05837.12 ORF42296 - 0.00071 20.0 2.4 0.00086 19.7 2.4 1.1 1 0 0 1 1 1 1 Centromere protein H (CENP-H) TolA_bind_tri PF16331.5 ORF42296 - 0.0011 19.1 0.1 0.0021 18.1 0.1 1.5 1 1 0 1 1 1 1 TolA binding protein trimerisation ZapB PF06005.12 ORF42296 - 0.0012 19.3 1.1 0.0016 18.8 1.1 1.2 1 0 0 1 1 1 1 Cell division protein ZapB DUF4201 PF13870.6 ORF42296 - 0.0052 16.5 1.7 0.0054 16.5 1.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) Spc7 PF08317.11 ORF42296 - 0.0056 15.6 1.5 0.0062 15.5 1.5 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Herpes_UL6 PF01763.16 ORF42296 - 0.011 14.2 1.5 0.013 14.0 1.5 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Jnk-SapK_ap_N PF09744.9 ORF42296 - 0.013 15.7 1.3 0.016 15.4 1.3 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Anillin_N PF16018.5 ORF42296 - 0.019 15.5 0.7 0.027 15.1 0.1 1.6 2 0 0 2 2 2 0 Anillin N-terminus YabA PF06156.13 ORF42296 - 0.02 15.5 2.3 0.024 15.3 2.3 1.1 1 0 0 1 1 1 0 Initiation control protein YabA FlaC_arch PF05377.11 ORF42296 - 0.032 14.6 1.4 0.073 13.5 1.4 1.7 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF4446 PF14584.6 ORF42296 - 0.04 13.9 1.1 0.045 13.7 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF5082 PF16888.5 ORF42296 - 0.041 14.2 2.0 0.05 13.9 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) DivIC PF04977.15 ORF42296 - 0.054 13.3 0.5 0.076 12.8 0.5 1.3 1 0 0 1 1 1 0 Septum formation initiator bZIP_1 PF00170.21 ORF42296 - 0.065 13.3 12.6 0.87 9.7 11.7 2.5 1 1 1 2 2 2 0 bZIP transcription factor bPH_6 PF10756.9 ORF42070 - 0.12 12.5 0.0 0.17 12.0 0.0 1.4 1 1 0 1 1 1 0 Bacterial PH domain Phytase PF02333.15 ORF41898 - 0.17 10.8 0.0 0.17 10.8 0.0 1.1 1 0 0 1 1 1 0 Phytase DUF4189 PF13827.6 ORF41285 - 0.069 13.7 0.2 0.086 13.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4189) MRP-63 PF14978.6 ORF40742 - 0.052 14.2 1.1 0.069 13.8 1.0 1.3 1 1 0 1 1 1 0 Mitochondrial ribosome protein 63 CSN8_PSD8_EIF3K PF10075.9 ORF40100 - 0.00049 20.1 0.0 0.00062 19.8 0.0 1.1 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family SAC3_GANP PF03399.16 ORF40100 - 0.0015 18.0 0.0 0.0018 17.8 0.0 1.0 1 0 0 1 1 1 1 SAC3/GANP family CPP1-like PF11833.8 ORF39869 - 0.17 11.5 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like RRM_1 PF00076.22 ORF39170 - 6.2e-09 35.5 0.0 1e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) OB_RNB PF08206.11 ORF39170 - 0.0058 16.3 0.1 0.012 15.3 0.1 1.5 1 0 0 1 1 1 1 Ribonuclease B OB domain RRM_5 PF13893.6 ORF39170 - 0.019 14.6 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 ORF39170 - 0.044 13.9 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Limkain b1 DUF2198 PF09964.9 ORF38470 - 0.043 13.9 2.5 0.053 13.6 0.4 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2198) FtsX PF02687.21 ORF38470 - 0.055 13.9 1.9 0.075 13.5 1.9 1.2 1 0 0 1 1 1 0 FtsX-like permease family Spore_III_AF PF09581.10 ORF38470 - 0.19 11.7 0.2 0.24 11.4 0.2 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) E1-E2_ATPase PF00122.20 ORF38470 - 0.34 10.4 1.6 0.39 10.2 1.6 1.2 1 0 0 1 1 1 0 E1-E2 ATPase PCSK9_C2 PF18464.1 ORF38206 - 0.068 13.2 0.8 0.068 13.2 0.8 1.8 2 0 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain CDC45 PF02724.14 ORF37523 - 6.3 5.0 15.1 6.6 4.9 15.1 1.0 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 ORF37523 - 6.5 6.5 16.2 7.2 6.4 16.2 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF3807 PF12720.7 ORF37523 - 6.6 7.0 18.4 7.3 6.8 18.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Ribosomal_L32e PF01655.18 ORF37460 - 0.066 13.6 0.1 0.075 13.5 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L32 DUF4064 PF13273.6 ORF35324 - 0.0051 17.1 0.2 0.0056 16.9 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) DUF2207 PF09972.9 ORF35324 - 0.23 10.2 0.7 0.24 10.1 0.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Arteri_Gl PF00951.18 ORF35165 - 0.19 11.5 1.5 0.28 11.0 1.5 1.2 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein PHZA_PHZB PF03284.13 ORF34838 - 0.029 14.0 0.0 0.032 13.9 0.0 1.1 1 0 0 1 1 1 0 Phenazine biosynthesis protein A/B Glyco_hydro_127 PF07944.12 ORF34380 - 0.78 8.2 2.4 7.6 4.9 0.1 2.0 1 1 1 2 2 2 0 Beta-L-arabinofuranosidase, GH127 TetR_C_27 PF17935.1 ORF34353 - 0.028 14.5 0.2 0.039 14.0 0.2 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF1398 PF07166.11 ORF34267 - 0.039 14.0 0.0 0.052 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) MOZ_SAS PF01853.18 ORF34139 - 6.9e-07 29.1 0.1 8.4e-07 28.8 0.1 1.1 1 0 0 1 1 1 1 MOZ/SAS family Lactamase_B_6 PF16661.5 ORF34139 - 0.021 14.3 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain PIG-P PF08510.12 ORF3381 - 4.1e-10 39.6 0.4 4.6e-10 39.5 0.4 1.0 1 0 0 1 1 1 1 PIG-P # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks288.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks288.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks288.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks288.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L32e PF01655.18 ORF32146 - 0.066 13.6 0.1 0.075 13.5 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L32 Secretogranin_V PF05281.11 ORF32101 - 0.12 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Neuroendocrine protein 7B2 precursor (Secretogranin V) Herpes_UL3 PF03369.13 ORF31628 - 0.025 15.1 0.4 0.032 14.8 0.4 1.1 1 0 0 1 1 1 0 Herpesvirus UL3 protein Mce4_CUP1 PF11887.8 ORF31525 - 0.12 11.8 0.2 0.13 11.7 0.2 1.0 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative DUF1496 PF07383.12 ORF31372 - 0.062 12.9 0.1 0.14 11.7 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1496) SVWC PF15430.6 ORF30829 - 0.00062 20.0 2.1 0.00062 20.0 2.1 1.4 1 1 0 1 1 1 1 Single domain von Willebrand factor type C Zn_ribbon_SprT PF17283.2 ORF30327 - 0.0056 16.6 3.9 1.4 8.9 0.9 2.5 2 1 0 2 2 2 2 SprT-like zinc ribbon domain DAG1 PF05454.11 ORF29148 - 0.081 12.3 0.2 0.092 12.1 0.2 1.1 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) DUF4964 PF16334.5 ORF29095 - 0.17 11.5 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4964) FPL PF09758.9 ORF27941 - 0.037 14.0 4.4 0.083 12.9 4.4 1.7 1 1 0 1 1 1 0 Uncharacterised conserved protein DUF4956 PF16316.5 ORF27703 - 0.1 12.3 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4956) TrkH PF02386.16 ORF26688 - 0.013 14.0 0.6 0.022 13.2 0.0 1.6 2 0 0 2 2 2 0 Cation transport protein Syd PF07348.12 ORF25890 - 1.7e-39 135.3 0.2 1.8e-39 135.2 0.2 1.0 1 0 0 1 1 1 1 Syd protein (SUKH-2) Cytochrom_B558a PF05038.13 ORF25615 - 0.099 12.2 3.2 0.1 12.2 3.2 1.1 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit DUF1980 PF09323.10 ORF25615 - 7 6.5 7.1 8 6.3 7.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF4688 PF15752.5 ORF2555 - 0.08 12.2 0.1 0.1 11.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4688) Big_3_2 PF12245.8 ORF24912 - 0.073 13.3 0.7 0.38 11.0 0.7 1.9 1 1 0 1 1 1 0 Bacterial Ig-like domain CHZ PF09649.10 ORF2434 - 0.4 10.2 0.2 0.4 10.2 0.2 2.2 2 0 0 2 2 2 0 Histone chaperone domain CHZ DUF4492 PF14899.6 ORF24287 - 0.11 12.4 0.3 0.11 12.4 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4492) AA_permease_2 PF13520.6 ORF24254 - 0.007 15.3 0.9 0.0077 15.1 0.9 1.0 1 0 0 1 1 1 1 Amino acid permease DAG1 PF05454.11 ORF24254 - 0.0081 15.6 0.1 0.0081 15.6 0.1 1.1 1 0 0 1 1 1 1 Dystroglycan (Dystrophin-associated glycoprotein 1) ASFV_J13L PF05568.11 ORF24254 - 0.011 15.5 0.3 0.013 15.3 0.3 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein SIT PF15330.6 ORF24254 - 0.012 16.1 0.0 0.018 15.5 0.0 1.2 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT TMEM154 PF15102.6 ORF24254 - 0.047 13.6 0.1 0.057 13.3 0.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family RTC PF01137.21 ORF24254 - 0.18 10.9 0.0 0.19 10.9 0.0 1.1 1 0 0 1 1 1 0 RNA 3'-terminal phosphate cyclase DUF575 PF04746.12 ORF24174 - 0.14 12.4 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF575) SAM_3 PF18016.1 ORF2311 - 0.052 13.4 0.0 0.073 12.9 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF4741 PF15897.5 ORF2311 - 0.13 12.1 0.2 0.15 11.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) Amidoligase_2 PF12224.8 ORF22881 - 0.039 13.6 0.5 0.087 12.5 0.5 1.5 1 1 0 1 1 1 0 Putative amidoligase enzyme TPH PF13868.6 ORF22881 - 0.25 9.8 10.4 0.55 8.7 10.4 1.6 1 1 0 1 1 1 0 Trichohyalin-plectin-homology domain Pox_polyA_pol_N PF12630.7 ORF21157 - 0.062 13.7 2.1 0.079 13.3 2.1 1.1 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain DUF4171 PF13775.6 ORF2084 - 0.0043 17.5 2.0 0.0053 17.2 2.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4171) CAC1F_C PF16885.5 ORF2084 - 0.016 14.9 0.3 0.018 14.7 0.3 1.1 1 0 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term RuBisCo_chap_C PF18087.1 ORF20760 - 0.14 11.8 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Rubisco Assembly chaperone C-terminal domain Keratin_assoc PF09775.9 ORF20277 - 0.16 11.6 8.7 0.18 11.5 7.6 1.4 1 1 1 2 2 2 0 Keratinocyte-associated protein 2 PGC7_Stella PF15549.6 ORF20270 - 0.033 14.2 0.2 0.041 13.9 0.2 1.1 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain NDUF_B7 PF05676.13 ORF20270 - 0.093 12.5 2.9 0.21 11.3 2.9 1.6 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) ELYS-bb PF16687.5 ORF19166 - 0.0017 17.0 0.0 0.002 16.8 0.0 1.0 1 0 0 1 1 1 1 beta-propeller of ELYS nucleoporin Amidase PF01425.21 ORF19166 - 0.0027 16.8 0.0 0.003 16.6 0.0 1.0 1 0 0 1 1 1 1 Amidase NUDE_C PF04880.13 ORF18647 - 0.24 11.9 3.4 0.27 11.7 3.4 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Macro_2 PF14519.6 ORF17677 - 0.011 15.1 0.1 0.012 14.9 0.1 1.0 1 0 0 1 1 1 0 Macro-like domain Sigma_1_2 PF03084.14 ORF17404 - 0.0089 15.3 0.1 0.0092 15.3 0.1 1.0 1 0 0 1 1 1 1 Reoviral Sigma1/Sigma2 family TarS_C1 PF18674.1 ORF17404 - 0.019 14.9 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 TarS beta-glycosyltransferase C-terminal domain 1 Cauli_DNA-bind PF03310.13 ORF17404 - 0.058 13.5 0.2 0.066 13.3 0.2 1.2 1 0 0 1 1 1 0 Caulimovirus DNA-binding protein Spore_IV_A PF09547.10 ORF1689 - 0.25 10.3 0.0 0.3 10.0 0.0 1.0 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) zf-DNA_Pol PF08996.10 ORF1636 - 0.012 15.4 0.3 0.013 15.2 0.3 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger Fz PF01392.22 ORF15915 - 0.012 16.2 0.6 0.013 16.1 0.6 1.1 1 0 0 1 1 1 0 Fz domain TIL PF01826.17 ORF151479 - 0.43 10.9 3.8 1.9 8.8 0.8 2.3 2 1 0 2 2 2 0 Trypsin Inhibitor like cysteine rich domain HisKA_4TM PF16926.5 ORF150259 - 0.16 11.5 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Archaeal 4TM region of histidine kinase SET PF00856.28 ORF149237 - 0.00093 19.6 0.0 0.0012 19.3 0.0 1.1 1 0 0 1 1 1 1 SET domain TusA PF01206.17 ORF149237 - 0.093 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Sulfurtransferase TusA Cyt-b5 PF00173.28 ORF149180 - 1.3e-06 28.5 0.1 1.8e-06 28.0 0.1 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Fumble PF03630.14 ORF147381 - 5.6e-26 91.5 0.2 5.8e-26 91.4 0.2 1.0 1 0 0 1 1 1 1 Fumble zf-DNA_Pol PF08996.10 ORF146892 - 0.012 15.4 0.3 0.013 15.2 0.3 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger DUF1104 PF06518.11 ORF146796 - 0.13 12.7 2.8 0.16 12.4 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) BicD PF09730.9 ORF146034 - 0.00048 18.7 1.2 0.00048 18.7 1.2 1.1 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D Rad54_N PF08658.10 ORF146034 - 0.023 14.9 0.1 0.025 14.8 0.1 1.0 1 0 0 1 1 1 0 Rad54 N terminal Wtap PF17098.5 ORF146034 - 0.035 14.0 2.6 0.046 13.7 2.6 1.3 1 1 0 1 1 1 0 WTAP/Mum2p family CLZ PF16526.5 ORF146034 - 0.05 14.0 1.7 0.14 12.5 1.7 1.8 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Granulin PF00396.18 ORF145770 - 9.6e-07 29.0 11.0 1.4e-06 28.5 11.0 1.2 1 0 0 1 1 1 1 Granulin DUF2599 PF10783.9 ORF144984 - 0.02 15.5 0.2 0.036 14.7 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2599) Peptidase_S10 PF00450.22 ORF144659 - 3.5e-14 53.0 0.1 3.8e-14 52.9 0.1 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Merozoite_SPAM PF07133.11 ORF144508 - 0.66 9.9 38.2 0.77 9.7 38.2 1.1 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) BUD22 PF09073.10 ORF144508 - 2.7 7.2 35.0 3.3 6.9 35.0 1.0 1 0 0 1 1 1 0 BUD22 Nop53 PF07767.11 ORF144508 - 3.3 7.0 39.7 3.7 6.9 39.7 1.0 1 0 0 1 1 1 0 Nop53 (60S ribosomal biogenesis) DUF3381 PF11861.8 ORF144508 - 7.1 6.4 36.7 9.4 6.0 36.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) Dynactin PF12455.8 ORF1445 - 0.13 11.4 0.1 0.13 11.4 0.1 1.0 1 0 0 1 1 1 0 Dynein associated protein EBA-175_VI PF11556.8 ORF14433 - 0.041 14.2 0.6 0.057 13.8 0.6 1.1 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 DUF2813 PF11398.8 ORF143044 - 0.13 11.5 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) DUF2828 PF11443.8 ORF142391 - 0.1 10.7 0.2 0.11 10.5 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) IL10 PF00726.17 ORF142314 - 0.12 11.8 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Interleukin 10 NRD1_2 PF01995.16 ORF142242 - 0.079 12.2 0.1 0.1 11.9 0.1 1.1 1 0 0 1 1 1 0 NrpR regulatory domains NRD1 and 2 SdpI PF13630.6 ORF141997 - 0.027 14.6 1.1 0.036 14.2 1.1 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF2207 PF09972.9 ORF141997 - 0.27 9.9 1.7 0.26 10.0 1.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ring_hydroxyl_A PF00848.19 ORF141319 - 2.8e-07 30.7 0.3 3.5e-07 30.4 0.3 1.1 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) Rep_fac-A_3 PF08661.11 ORF140719 - 0.099 13.0 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 Replication factor A protein 3 SUKH_5 PF14567.6 ORF140289 - 0.017 14.9 0.5 0.019 14.7 0.5 1.1 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall PGBA_C PF15437.6 ORF140067 - 0.13 12.6 4.8 0.13 12.6 4.2 1.4 1 1 0 1 1 1 0 Plasminogen-binding protein pgbA C-terminal SPATA1_C PF15743.5 ORF139430 - 0.02 15.0 1.3 0.022 14.8 1.3 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated C-terminus BLI1 PF17324.2 ORF139430 - 0.028 15.1 0.2 0.033 14.8 0.2 1.2 1 0 0 1 1 1 0 BLOC-1 interactor 1 DUF3716 PF12511.8 ORF137214 - 0.046 13.8 1.0 0.092 12.8 1.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) Coronavirus_5 PF05528.11 ORF136655 - 0.098 12.6 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Coronavirus gene 5 protein Apc13p PF05839.11 ORF13648 - 0.018 15.2 1.8 0.17 12.1 1.8 2.0 1 1 0 1 1 1 0 Apc13p protein YwiC PF14256.6 ORF135347 - 0.2 12.0 9.8 0.28 11.5 9.8 1.3 1 0 0 1 1 1 0 YwiC-like protein zf-C2H2_jaz PF12171.8 ORF134464 - 0.007 16.6 0.5 0.016 15.5 0.5 1.7 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding DUF4801 PF16059.5 ORF134409 - 0.00018 21.4 0.4 0.00035 20.5 0.4 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4801) NS3_envE PF02723.14 ORF133133 - 0.012 15.6 3.4 0.014 15.4 3.4 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E DnaJ_C PF01556.18 ORF132712 - 0.0075 16.4 0.1 0.014 15.5 0.0 1.5 2 0 0 2 2 2 1 DnaJ C terminal domain DUF5402 PF17393.2 ORF132712 - 0.0084 16.1 0.3 0.0095 15.9 0.3 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5402) LytTR PF04397.15 ORF132712 - 0.031 14.5 0.5 0.039 14.2 0.5 1.2 1 0 0 1 1 1 0 LytTr DNA-binding domain RPAP2_Rtr1 PF04181.13 ORF132217 - 0.013 15.8 2.4 0.043 14.1 0.2 2.1 1 1 1 2 2 2 0 Rtr1/RPAP2 family zf-Tim10_DDP PF02953.15 ORF132217 - 0.045 13.4 3.4 0.069 12.8 3.4 1.3 1 0 0 1 1 1 0 Tim10/DDP family zinc finger DUF3399 PF11879.8 ORF131561 - 1.1 9.6 3.9 0.54 10.6 1.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3399) DUF2179 PF10035.9 ORF131274 - 0.038 13.7 0.0 0.066 13.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) NAP PF00956.18 ORF130143 - 5.5e-06 25.8 3.3 1.1e-05 24.7 0.0 2.0 2 0 0 2 2 2 1 Nucleosome assembly protein (NAP) CENP-B_dimeris PF09026.10 ORF130143 - 0.0022 18.4 19.1 0.0029 18.0 19.1 1.2 1 0 0 1 1 1 1 Centromere protein B dimerisation domain NOA36 PF06524.12 ORF130143 - 0.0071 15.7 11.7 0.0078 15.6 11.7 1.1 1 0 0 1 1 1 1 NOA36 protein DUF2457 PF10446.9 ORF130143 - 0.012 14.8 15.8 0.013 14.7 15.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) RXT2_N PF08595.11 ORF130143 - 0.013 15.5 4.4 0.013 15.5 4.4 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal FAM176 PF14851.6 ORF130143 - 0.015 15.0 2.9 0.017 14.8 2.9 1.2 1 0 0 1 1 1 0 FAM176 family YL1 PF05764.13 ORF130143 - 0.032 14.3 10.8 0.028 14.6 10.8 1.1 1 0 0 1 1 1 0 YL1 nuclear protein GCIP PF13324.6 ORF130143 - 0.06 13.0 4.2 0.054 13.1 4.2 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting CDC45 PF02724.14 ORF130143 - 0.06 11.6 7.9 0.056 11.7 7.9 1.0 1 0 0 1 1 1 0 CDC45-like protein Sigma70_ner PF04546.13 ORF130143 - 0.062 13.2 6.5 0.062 13.2 6.5 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region DUF4611 PF15387.6 ORF130143 - 0.063 13.5 13.3 0.11 12.8 13.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) GP67 PF17634.2 ORF130143 - 0.087 13.3 18.2 0.13 12.6 18.2 1.3 1 0 0 1 1 1 0 Gene product 67 GEN1_C PF18380.1 ORF130143 - 0.12 13.3 3.8 0.13 13.1 3.8 1.2 1 0 0 1 1 1 0 Holliday junction resolvase Gen1 C-terminal domain HSP90 PF00183.18 ORF130143 - 0.13 11.1 3.4 0.16 10.9 3.4 1.0 1 0 0 1 1 1 0 Hsp90 protein RRN3 PF05327.11 ORF130143 - 0.32 9.5 4.0 0.28 9.7 4.0 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 PTPRCAP PF15713.5 ORF130143 - 0.46 10.8 11.0 0.52 10.6 11.0 1.1 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated TFB6 PF17110.5 ORF130143 - 0.5 10.1 3.0 0.54 10.0 3.0 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH TRAP_alpha PF03896.16 ORF130143 - 0.79 8.9 3.3 0.82 8.8 3.3 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit DNA_pol_phi PF04931.13 ORF130143 - 0.85 7.6 17.6 0.91 7.5 17.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 ORF130143 - 2.6 6.2 13.4 2.5 6.2 13.4 1.0 1 0 0 1 1 1 0 Nop14-like family TLP-20 PF06088.11 ORF130143 - 3.2 7.6 5.1 3.8 7.4 5.1 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) DUF4637 PF15470.6 ORF130143 - 4.7 6.9 10.9 5.9 6.6 10.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF724 PF05266.14 ORF12951 - 0.2 11.5 10.5 0.24 11.2 10.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF4781 PF16013.5 ORF12951 - 0.31 9.8 2.3 0.36 9.6 2.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) CCDC53 PF10152.9 ORF12951 - 0.77 10.2 6.4 0.93 9.9 6.4 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex Borrelia_P83 PF05262.11 ORF12951 - 0.91 7.9 7.3 0.94 7.9 7.3 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein MRP-S26 PF14943.6 ORF12951 - 0.91 9.4 14.0 1.2 9.1 14.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 DUF4574 PF15141.6 ORF12951 - 5.2 7.0 7.0 3.5 7.6 5.0 1.8 1 1 1 2 2 2 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Ribosomal_L32e PF01655.18 ORF128985 - 0.066 13.6 0.1 0.075 13.5 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L32 KIX_2 PF16987.5 ORF128810 - 0.0011 18.9 0.0 0.0014 18.6 0.0 1.2 1 0 0 1 1 1 1 KIX domain TFIIS_M PF07500.14 ORF128810 - 0.0053 17.2 0.0 0.0066 16.9 0.0 1.1 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain RRM_1 PF00076.22 ORF128540 - 6.2e-09 35.5 0.0 1e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) OB_RNB PF08206.11 ORF128540 - 0.0058 16.3 0.1 0.012 15.3 0.1 1.5 1 0 0 1 1 1 1 Ribonuclease B OB domain RRM_5 PF13893.6 ORF128540 - 0.019 14.6 0.0 0.022 14.4 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 ORF128540 - 0.044 13.9 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Limkain b1 SURF4 PF02077.15 ORF128358 - 0.11 12.0 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 SURF4 family RRM_7 PF16367.5 ORF128275 - 0.067 13.3 0.1 0.1 12.7 0.1 1.4 1 1 0 1 1 1 0 RNA recognition motif tRNA-synt_1e PF01406.19 ORF128005 - 1.4e-34 119.8 1.3 1.6e-34 119.7 1.3 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 ORF128005 - 0.00027 19.8 0.1 0.00028 19.7 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 ORF128005 - 0.01 14.1 0.0 0.011 14.0 0.0 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) RyR PF02026.16 ORF128005 - 0.077 13.2 0.6 0.11 12.7 0.6 1.2 1 0 0 1 1 1 0 RyR domain UL41A PF17591.2 ORF127907 - 1.9 8.6 5.9 0.73 10.0 2.9 1.8 1 1 1 2 2 2 0 Herpesvirus UL41A Herpes_LMP1 PF05297.11 ORF126743 - 0.92 8.6 7.1 1 8.5 7.1 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) IBN_N PF03810.19 ORF126526 - 0.0083 16.0 0.5 0.087 12.8 0.2 2.0 1 1 1 2 2 2 1 Importin-beta N-terminal domain Sgf11_N PF18519.1 ORF126526 - 0.014 15.0 0.1 0.034 13.7 0.1 1.6 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain DoxX PF07681.12 ORF126394 - 1.1e-08 35.5 8.9 1.1e-08 35.5 8.9 1.5 2 0 0 2 2 2 1 DoxX DoxD PF04173.13 ORF126394 - 0.00051 20.0 1.0 0.00067 19.6 1.0 1.1 1 0 0 1 1 1 1 TQO small subunit DoxD SURF4 PF02077.15 ORF126394 - 0.0012 18.5 0.6 0.0014 18.2 0.6 1.3 1 1 0 1 1 1 1 SURF4 family DUF1700 PF08006.11 ORF126394 - 0.15 11.6 3.8 0.14 11.7 3.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF1270 PF06900.11 ORF126394 - 0.18 12.2 1.7 0.33 11.3 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1270) Flp1_like PF16982.5 ORF126063 - 0.11 11.9 1.0 0.11 11.9 1.0 2.1 2 0 0 2 2 2 0 Putative Flagellin, Flp1-like, domain SAM_3 PF18016.1 ORF125934 - 0.052 13.4 0.0 0.073 12.9 0.0 1.3 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF4741 PF15897.5 ORF125934 - 0.13 12.1 0.2 0.15 11.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) TpcC PF12642.7 ORF12558 - 0.052 13.3 0.0 0.059 13.1 0.0 1.1 1 0 0 1 1 1 0 Conjugative transposon protein TcpC DUF4150 PF13665.6 ORF12558 - 0.1 12.8 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4150) Defensin_beta PF00711.19 ORF125356 - 0.13 12.3 4.5 3.6 7.7 0.2 2.6 3 0 0 3 3 3 0 Beta defensin Defensin_1 PF00323.19 ORF125356 - 0.33 11.5 2.5 3.1 8.4 0.1 2.4 2 0 0 2 2 2 0 Mammalian defensin Gemini_coat PF00844.18 ORF12499 - 0.04 13.4 0.4 0.047 13.2 0.4 1.0 1 0 0 1 1 1 0 Geminivirus coat protein/nuclear export factor BR1 family DUF4813 PF16072.5 ORF124330 - 0.023 14.4 0.0 0.028 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4813) zf-TRAF_2 PF15965.5 ORF123919 - 0.089 13.3 8.0 0.025 15.0 5.3 1.6 1 1 1 2 2 2 0 TRAF-like zinc-finger Myticin-prepro PF10690.9 ORF123796 - 0.4 10.9 6.7 0.58 10.4 6.7 1.3 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Pkinase PF00069.25 ORF123127 - 0.0068 15.8 0.1 0.012 15.1 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Leucyl-specific PF14795.6 ORF122081 - 0.00066 19.7 0.1 0.001 19.1 0.1 1.2 1 0 0 1 1 1 1 Leucine-tRNA synthetase-specific domain DUF2207 PF09972.9 ORF121945 - 4 6.1 7.5 4.1 6.1 7.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ORC2 PF04084.14 ORF120275 - 0.042 12.8 0.0 0.05 12.5 0.0 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 2 DUF4386 PF14329.6 ORF119320 - 0.044 13.7 0.4 0.044 13.7 0.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4386) DUF2909 PF11137.8 ORF118461 - 0.042 13.8 0.0 0.074 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2909) NEMO PF11577.8 ORF117962 - 0.0071 16.3 0.2 0.017 15.2 0.2 1.6 1 0 0 1 1 1 1 NF-kappa-B essential modulator NEMO zf-RING_UBOX PF13445.6 ORF117776 - 0.0014 18.6 0.9 0.0014 18.6 0.9 2.1 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF117776 - 0.01 15.7 2.0 0.01 15.7 2.0 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF117776 - 0.01 15.7 1.2 0.01 15.7 1.2 1.8 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) UPAR_LY6_2 PF16975.5 ORF117175 - 0.016 15.4 0.2 0.02 15.1 0.2 1.3 1 0 0 1 1 1 0 Ly6/PLAUR domain-containing protein 6, Lypd6 Asp-Al_Ex PF06826.12 ORF116787 - 0.049 13.4 0.0 0.054 13.3 0.0 1.1 1 0 0 1 1 1 0 Predicted Permease Membrane Region SUZ PF12752.7 ORF116102 - 1.3 9.9 4.4 1.8 9.4 4.4 1.6 1 1 0 1 1 1 0 SUZ domain MmgE_PrpD PF03972.14 ORF114959 - 0.2 10.1 0.0 0.24 9.9 0.0 1.0 1 0 0 1 1 1 0 MmgE/PrpD family DUF4661 PF15576.6 ORF114946 - 5.2 6.9 8.6 5.9 6.7 8.4 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4661) DUF5340 PF17275.2 ORF11461 - 0.19 11.9 0.1 0.3 11.3 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5340) UPF0058 PF01893.16 ORF114360 - 0.015 15.6 0.1 0.092 13.0 0.1 1.9 1 1 1 2 2 2 0 Uncharacterised protein family UPF0058 DUF3454 PF11936.8 ORF11434 - 0.0024 18.2 0.2 0.0042 17.5 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3454) ubiquitin PF00240.23 ORF114125 - 0.0036 17.0 0.0 0.0081 15.9 0.0 1.8 1 1 0 1 1 1 1 Ubiquitin family DUF4956 PF16316.5 ORF113118 - 0.1 12.3 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4956) TetR_C_2 PF08361.11 ORF113021 - 4.1e-30 104.4 0.3 4.5e-30 104.2 0.3 1.0 1 0 0 1 1 1 1 MAATS-type transcriptional repressor, C-terminal region TetR_C_6 PF13977.6 ORF113021 - 0.0047 17.1 0.0 0.0051 17.0 0.0 1.1 1 0 0 1 1 1 1 BetI-type transcriptional repressor, C-terminal TetR_C_4 PF08359.11 ORF113021 - 0.1 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region TMA7 PF09072.10 ORF11202 - 2.9e-06 28.0 16.8 4.9e-06 27.3 16.8 1.4 1 1 0 1 1 1 1 Translation machinery associated TMA7 CAT_RBD PF03123.15 ORF11202 - 0.026 14.4 0.3 0.039 13.9 0.3 1.2 1 0 0 1 1 1 0 CAT RNA binding domain V-SNARE_C PF12352.8 ORF111282 - 0.1 12.9 0.7 11 6.4 0.1 2.2 2 0 0 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus DUF1327 PF07041.11 ORF111220 - 0.025 14.6 0.1 0.04 13.9 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1327) DUF2061 PF09834.9 ORF110788 - 0.13 12.8 2.3 0.23 12.0 0.1 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2061) Arfaptin PF06456.13 ORF109832 - 0.064 12.8 1.3 0.08 12.5 1.3 1.0 1 0 0 1 1 1 0 Arfaptin-like domain DUF3716 PF12511.8 ORF109648 - 0.046 13.8 1.0 0.092 12.8 1.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) RE_ApaLI PF09499.10 ORF109598 - 0.2 11.3 0.0 0.22 11.2 0.0 1.0 1 0 0 1 1 1 0 ApaLI-like restriction endonuclease MORN PF02493.20 ORF109143 - 3.5e-06 26.6 12.8 0.021 14.7 2.7 3.9 3 1 0 3 3 3 3 MORN repeat NodS PF05401.11 ORF109094 - 0.15 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) SKA2 PF16740.5 ORF107115 - 0.0037 17.0 1.5 0.0041 16.9 1.1 1.4 1 1 0 1 1 1 1 Spindle and kinetochore-associated protein 2 Antigen_Bd37 PF11641.8 ORF107115 - 0.052 13.0 0.8 0.065 12.7 0.8 1.0 1 0 0 1 1 1 0 Glycosylphosphatidylinositol-anchored merozoite surface protein PemK_toxin PF02452.17 ORF106777 - 6.2e-14 52.3 0.1 7.5e-14 52.1 0.1 1.0 1 0 0 1 1 1 1 PemK-like, MazF-like toxin of type II toxin-antitoxin system DUF1713 PF08213.11 ORF106185 - 0.015 15.2 0.8 0.015 15.2 0.8 2.7 3 0 0 3 3 3 0 Mitochondrial domain of unknown function (DUF1713) Spc42p PF11544.8 ORF106185 - 0.045 13.7 1.1 0.068 13.2 1.1 1.5 1 1 0 1 1 1 0 Spindle pole body component Spc42p QVR PF17064.5 ORF104541 - 0.007 16.6 1.1 0.009 16.2 1.1 1.1 1 0 0 1 1 1 1 Sleepless protein Mac-1 PF09028.10 ORF104316 - 0.1 11.7 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Mac 1 ERbeta_N PF12497.8 ORF103885 - 0.043 13.6 2.5 0.056 13.2 2.5 1.2 1 0 0 1 1 1 0 Estrogen receptor beta COX7B PF05392.11 ORF102407 - 0.025 14.2 0.0 0.047 13.4 0.0 1.4 1 0 0 1 1 1 0 Cytochrome C oxidase chain VIIB YwiC PF14256.6 ORF101466 - 0.2 12.0 9.8 0.28 11.5 9.8 1.3 1 0 0 1 1 1 0 YwiC-like protein CX9C PF16860.5 ORF10119 - 0.017 15.1 0.0 0.59 10.2 0.0 2.3 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, DUF4715 PF15835.5 NODE_60299_length_274_cov_1.138075_g52359_i0reverse_frame_1 - 0.075 13.1 0.0 0.097 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4715) Resistin PF06954.11 NODE_60299_length_274_cov_1.138075_g52359_i0forward_frame_1 - 0.037 14.6 0.6 0.058 13.9 0.6 1.3 1 0 0 1 1 1 0 Resistin YdaT_toxin PF06254.11 NODE_60295_length_274_cov_1.393305_g52355_i0reverse_frame_1 - 0.055 14.0 0.0 0.091 13.3 0.0 1.5 1 1 1 2 2 2 0 Putative bacterial toxin ydaT Mak16 PF04874.14 NODE_60294_length_274_cov_1.401674_g52354_i0reverse_frame_1 - 4.2e-16 59.4 4.2 6.9e-16 58.7 4.2 1.4 1 0 0 1 1 1 1 Mak16 protein C-terminal region TRAM1 PF08390.11 NODE_60291_length_274_cov_1.451883_g52351_i0reverse_frame_1 - 0.14 11.8 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 TRAM1-like protein zf-B_box PF00643.24 NODE_60289_length_274_cov_1.502092_g52349_i0forward_frame_1 - 0.015 15.4 9.4 0.02 15.0 9.4 1.2 1 0 0 1 1 1 0 B-box zinc finger DUF1989 PF09347.10 NODE_60289_length_274_cov_1.502092_g52349_i0forward_frame_1 - 0.053 13.2 0.4 0.057 13.1 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) PHD PF00628.29 NODE_60289_length_274_cov_1.502092_g52349_i0forward_frame_1 - 0.16 11.9 9.6 0.38 10.7 9.6 1.7 1 1 1 2 2 2 0 PHD-finger Pkinase PF00069.25 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 3.8e-26 92.0 0.2 4e-26 91.9 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 2.7e-16 59.6 0.0 3e-16 59.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 2.8e-05 23.6 0.0 3.1e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 5.7e-05 22.6 0.0 6.4e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.0002 21.3 0.0 0.0002 21.3 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.00054 19.1 0.1 0.00056 19.1 0.1 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Haspin_kinase PF12330.8 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.032 13.2 0.1 0.039 12.9 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain RIO1 PF01163.22 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.051 13.2 0.0 0.057 13.0 0.0 1.1 1 0 0 1 1 1 0 RIO1 family YrbL-PhoP_reg PF10707.9 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.12 11.9 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.14 10.9 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase FTA2 PF13095.6 NODE_60285_length_274_cov_1.585774_g52345_i0forward_frame_1 - 0.14 11.8 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 HCV_NS2 PF01538.18 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_1 - 0.0061 16.2 0.5 0.0063 16.2 0.5 1.2 1 0 0 1 1 1 1 Hepatitis C virus non-structural protein NS2 BTV_NS2 PF04514.12 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_1 - 0.097 11.5 0.0 0.11 11.3 0.0 1.0 1 0 0 1 1 1 0 Bluetongue virus non-structural protein NS2 Na_Ca_ex PF01699.24 NODE_60278_length_274_cov_1.711297_g52338_i0reverse_frame_1 - 0.00015 21.8 5.2 0.00017 21.6 5.2 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein DUF3767 PF12597.8 NODE_60278_length_274_cov_1.711297_g52338_i0reverse_frame_1 - 0.24 11.3 0.4 0.36 10.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) Med3 PF11593.8 NODE_60269_length_274_cov_1.907950_g52329_i0reverse_frame_1 - 3.2 6.9 5.9 3.6 6.7 5.9 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Dyp_perox PF04261.12 NODE_60267_length_274_cov_2.158996_g52327_i0forward_frame_1 - 0.002 17.2 0.1 0.0024 16.9 0.1 1.1 1 0 0 1 1 1 1 Dyp-type peroxidase family CHASE4 PF05228.13 NODE_60267_length_274_cov_2.158996_g52327_i0forward_frame_1 - 0.02 15.1 0.0 0.86 9.8 0.0 2.0 1 1 0 1 1 1 0 CHASE4 domain TAT_signal PF10518.9 NODE_60267_length_274_cov_2.158996_g52327_i0forward_frame_1 - 0.08 12.8 0.1 0.08 12.8 0.1 1.7 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Peptidase_S8 PF00082.22 NODE_60265_length_274_cov_2.184100_g52325_i0reverse_frame_1 - 4.5e-13 49.1 0.5 5.2e-13 48.9 0.5 1.0 1 0 0 1 1 1 1 Subtilase family TMEM192 PF14802.6 NODE_60263_length_274_cov_2.267782_g52323_i0forward_frame_1 - 0.16 11.0 4.5 0.19 10.8 4.5 1.1 1 0 0 1 1 1 0 TMEM192 family Tyr_Deacylase PF02580.16 NODE_60262_length_274_cov_2.322176_g52322_i0forward_frame_1 - 0.049 14.2 0.1 0.049 14.2 0.1 1.1 1 0 0 1 1 1 0 D-Tyr-tRNA(Tyr) deacylase RSS_P20 PF11757.8 NODE_60257_length_274_cov_2.451883_g52317_i0reverse_frame_1 - 0.072 13.5 0.1 0.085 13.3 0.1 1.1 1 0 0 1 1 1 0 Suppressor of RNA silencing P21-like N-terminal domain Pox_P4B PF03292.14 NODE_60256_length_274_cov_2.464435_g52316_i0forward_frame_1 - 0.14 10.4 1.3 0.14 10.4 1.3 1.1 1 0 0 1 1 1 0 Poxvirus P4B major core protein NLPC_P60 PF00877.19 NODE_60250_length_274_cov_2.623431_g52310_i0forward_frame_1 - 0.067 13.2 0.0 0.095 12.7 0.0 1.3 1 1 0 1 1 1 0 NlpC/P60 family DUF1382 PF07131.11 NODE_60249_length_274_cov_2.673640_g52309_i0reverse_frame_1 - 0.15 12.1 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1382) Ribosomal_S18 PF01084.20 NODE_60249_length_274_cov_2.673640_g52309_i0forward_frame_1 - 0.029 14.6 0.1 0.052 13.8 0.1 1.4 1 0 0 1 1 1 0 Ribosomal protein S18 zf-C3HC4 PF00097.25 NODE_60248_length_274_cov_2.698745_g52308_i0reverse_frame_1 - 9.8 6.1 13.0 0.76 9.7 7.7 2.0 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) 7tm_7 PF08395.12 NODE_60248_length_274_cov_2.698745_g52308_i0forward_frame_1 - 0.0062 15.8 0.1 0.0071 15.6 0.1 1.0 1 0 0 1 1 1 1 7tm Chemosensory receptor DUF2953 PF11167.8 NODE_60248_length_274_cov_2.698745_g52308_i0forward_frame_1 - 0.016 15.3 0.4 0.03 14.4 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2953) CrgA PF06781.12 NODE_60248_length_274_cov_2.698745_g52308_i0forward_frame_1 - 0.5 10.5 2.3 0.56 10.3 2.3 1.4 1 1 0 1 1 1 0 Cell division protein CrgA MsyB PF13984.6 NODE_60247_length_274_cov_2.711297_g52307_i0reverse_frame_1 - 0.0016 18.7 0.8 0.003 17.9 0.4 1.6 1 1 1 2 2 2 1 MsyB protein LodA_N PF17990.1 NODE_60247_length_274_cov_2.711297_g52307_i0reverse_frame_1 - 0.0036 17.3 2.3 0.004 17.1 2.3 1.1 1 0 0 1 1 1 1 L-Lysine epsilon oxidase N-terminal Fucose_iso_C PF02952.17 NODE_60247_length_274_cov_2.711297_g52307_i0reverse_frame_1 - 0.16 11.7 0.3 0.2 11.4 0.3 1.1 1 0 0 1 1 1 0 L-fucose isomerase, C-terminal domain ArfGap PF01412.18 NODE_60247_length_274_cov_2.711297_g52307_i0reverse_frame_1 - 0.32 11.1 4.9 0.4 10.8 4.9 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Inhibitor_I29 PF08246.12 NODE_60246_length_274_cov_2.811715_g52306_i0forward_frame_1 - 0.023 15.1 6.0 0.032 14.7 6.0 1.2 1 0 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) c-SKI_SMAD_bind PF08782.10 NODE_60239_length_274_cov_2.983264_g52299_i0reverse_frame_1 - 0.015 15.5 2.8 0.022 15.0 2.8 1.2 1 0 0 1 1 1 0 c-SKI Smad4 binding domain DUF2650 PF10853.8 NODE_60234_length_274_cov_3.242678_g52294_i0reverse_frame_1 - 0.033 13.9 0.1 0.071 12.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) LPAM_2 PF13627.6 NODE_60233_length_274_cov_3.309623_g52293_i0reverse_frame_1 - 0.15 11.9 0.1 0.24 11.3 0.1 1.3 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site Metallothio PF00131.20 NODE_60233_length_274_cov_3.309623_g52293_i0forward_frame_1 - 0.56 10.4 17.0 0.05 13.7 8.6 2.1 1 1 1 2 2 2 0 Metallothionein DUF2835 PF11197.8 NODE_60223_length_274_cov_8.393305_g52283_i0forward_frame_1 - 0.0036 17.1 0.1 0.0048 16.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2835) Clavanin PF05452.11 NODE_60222_length_274_cov_23.866109_g52282_i0forward_frame_1 - 0.33 11.2 3.8 9.7 6.5 0.2 2.1 1 1 1 2 2 2 0 Clavanin LisH_TPL PF17814.1 NODE_60216_length_274_cov_49.305439_g52276_i0reverse_frame_1 - 0.0043 16.7 0.4 0.017 14.8 0.1 2.0 2 0 0 2 2 2 1 LisH-like dimerisation domain zf-C2H2_7 PF15269.6 NODE_60213_length_274_cov_53.786611_g52273_i0reverse_frame_1 - 1.7 8.8 10.0 3.9 7.6 0.2 3.0 2 1 1 3 3 3 0 Zinc-finger DUF2689 PF10894.8 NODE_60211_length_274_cov_57.707113_g52271_i0reverse_frame_1 - 0.15 11.9 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2689) DUF563 PF04577.14 NODE_60209_length_274_cov_58.569038_g52269_i0forward_frame_1 - 7.4e-06 26.3 0.1 9.1e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF563) zf-CXXC PF02008.20 NODE_60202_length_274_cov_67.259414_g52262_i0reverse_frame_1 - 0.045 13.8 16.6 0.12 12.4 9.9 2.2 2 0 0 2 2 2 0 CXXC zinc finger domain S_locus_glycop PF00954.20 NODE_60202_length_274_cov_67.259414_g52262_i0reverse_frame_1 - 3.7 8.1 8.0 6.3 7.4 0.0 2.1 2 0 0 2 2 2 0 S-locus glycoprotein domain zf-Sec23_Sec24 PF04810.15 NODE_60202_length_274_cov_67.259414_g52262_i0forward_frame_1 - 0.18 11.9 8.1 2.9 8.0 1.9 2.8 2 2 0 2 2 2 0 Sec23/Sec24 zinc finger LSR PF05624.14 NODE_60201_length_274_cov_70.154812_g52261_i0reverse_frame_1 - 1.5 8.9 13.2 9.1 6.4 7.5 2.3 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) Efg1 PF10153.9 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_1 - 0.074 13.4 2.7 0.084 13.2 2.7 1.2 1 0 0 1 1 1 0 rRNA-processing protein Efg1 IGFL PF14653.6 NODE_60198_length_274_cov_79.485356_g52258_i0reverse_frame_1 - 0.37 10.8 6.3 0.098 12.6 2.4 1.8 1 1 1 2 2 2 0 Insulin growth factor-like family PEMT PF04191.13 NODE_60188_length_274_cov_114.715481_g52248_i0reverse_frame_1 - 2.1e-10 40.9 0.0 2.4e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 NODE_60188_length_274_cov_114.715481_g52248_i0reverse_frame_1 - 1.3e-06 28.7 0.0 1.5e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF1295 PF06966.12 NODE_60188_length_274_cov_114.715481_g52248_i0reverse_frame_1 - 0.0025 17.4 0.1 0.0034 16.9 0.1 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) IL34 PF15036.6 NODE_60183_length_274_cov_146.066946_g52243_i0reverse_frame_1 - 0.029 14.4 0.8 0.034 14.2 0.7 1.3 1 1 0 1 1 1 0 Interleukin 34 DUF2732 PF10809.8 NODE_60183_length_274_cov_146.066946_g52243_i0reverse_frame_1 - 0.036 13.9 0.1 0.053 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2732) Herpes_capsid PF06112.11 NODE_60181_length_274_cov_149.866109_g52241_i0reverse_frame_1 - 0.056 13.5 3.3 0.062 13.4 3.3 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein zf-ribbon_3 PF13248.6 NODE_60172_length_274_cov_300.117155_g52232_i0forward_frame_1 - 0.031 13.7 0.3 0.36 10.3 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Toxin_TOLIP PF00087.21 NODE_60168_length_274_cov_662.556485_g52228_i0forward_frame_1 - 0.086 13.1 4.2 3.6 7.9 0.3 2.2 1 1 1 2 2 2 0 Snake toxin and toxin-like protein Glyco_hydro_88 PF07470.13 NODE_60167_length_274_cov_665.020921_g52227_i0forward_frame_1 - 0.017 14.2 0.1 0.023 13.8 0.1 1.1 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 DUF1249 PF06853.12 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_1 - 0.032 14.2 0.1 0.04 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1249) Na_H_antiporter PF03553.14 NODE_60165_length_274_cov_1275.953975_g52225_i0forward_frame_1 - 0.0068 15.7 0.6 0.0068 15.7 0.6 1.1 1 0 0 1 1 1 1 Na+/H+ antiporter family tRNA-synt_2e PF02091.15 NODE_60164_length_275_cov_0.883333_g52224_i0reverse_frame_1 - 0.2 10.9 0.2 0.22 10.7 0.2 1.0 1 0 0 1 1 1 0 Glycyl-tRNA synthetase alpha subunit TspO_MBR PF03073.15 NODE_60164_length_275_cov_0.883333_g52224_i0forward_frame_1 - 0.12 12.5 4.7 0.15 12.1 4.7 1.1 1 0 0 1 1 1 0 TspO/MBR family TPR_2 PF07719.17 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.00013 21.8 0.1 0.47 10.7 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.005 17.4 0.0 3.8 8.3 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.009 16.2 0.7 1 9.6 0.1 2.2 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 ANAPC8 PF04049.13 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.0098 15.9 0.2 0.0098 15.9 0.2 1.2 1 0 0 1 1 1 1 Anaphase promoting complex subunit 8 / Cdc23 TPR_7 PF13176.6 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.035 14.1 0.7 0.52 10.5 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.042 14.1 0.1 7.8 7.0 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat CCM2_C PF16545.5 NODE_60161_length_275_cov_0.995833_g52221_i0reverse_frame_1 - 0.38 11.3 2.2 0.57 10.7 1.1 1.8 1 1 1 2 2 2 0 Cerebral cavernous malformation protein, harmonin-homology CybS PF05328.12 NODE_60161_length_275_cov_0.995833_g52221_i0forward_frame_1 - 0.13 12.0 0.9 0.15 11.8 0.9 1.2 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit ALG3 PF05208.13 NODE_60136_length_275_cov_1.620833_g52196_i0reverse_frame_1 - 5.6e-06 26.0 0.1 6.5e-06 25.8 0.1 1.1 1 0 0 1 1 1 1 ALG3 protein Pox_polyA_pol PF03296.13 NODE_60136_length_275_cov_1.620833_g52196_i0reverse_frame_1 - 0.014 15.3 0.2 0.016 15.1 0.2 1.2 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Cg6151-P PF10233.9 NODE_60136_length_275_cov_1.620833_g52196_i0reverse_frame_1 - 0.035 14.4 0.1 0.086 13.1 0.0 1.6 1 1 1 2 2 2 0 Uncharacterized conserved protein CG6151-P GET2 PF08690.10 NODE_60134_length_275_cov_1.720833_g52194_i0reverse_frame_1 - 0.83 9.3 2.3 0.97 9.1 2.3 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 Rhabdo_NV PF02484.15 NODE_60131_length_275_cov_1.754167_g52191_i0reverse_frame_1 - 0.031 14.4 0.1 0.032 14.4 0.1 1.2 1 0 0 1 1 1 0 Rhabdovirus Non-virion protein LON_substr_bdg PF02190.16 NODE_60131_length_275_cov_1.754167_g52191_i0reverse_frame_1 - 0.05 13.5 0.5 0.06 13.2 0.5 1.2 1 0 0 1 1 1 0 ATP-dependent protease La (LON) substrate-binding domain LXG PF04740.12 NODE_60127_length_275_cov_1.770833_g52187_i0forward_frame_1 - 0.1 12.3 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 LXG domain of WXG superfamily Exo84_C PF16528.5 NODE_60127_length_275_cov_1.770833_g52187_i0forward_frame_1 - 0.12 12.1 2.0 0.14 12.0 2.0 1.1 1 0 0 1 1 1 0 Exocyst component 84 C-terminal RNA_pol_Rpb2_3 PF04565.16 NODE_60124_length_275_cov_1.879167_g52184_i0reverse_frame_1 - 0.003 17.7 0.9 0.0053 16.9 0.9 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 MamL-1 PF09596.10 NODE_60124_length_275_cov_1.879167_g52184_i0forward_frame_1 - 0.047 14.0 1.0 0.087 13.1 1.0 1.4 1 0 0 1 1 1 0 MamL-1 domain Calici_PP_N PF08405.11 NODE_60119_length_275_cov_2.033333_g52179_i0forward_frame_1 - 0.32 9.8 2.9 0.35 9.6 2.9 1.0 1 0 0 1 1 1 0 Viral polyprotein N-terminal Endonuclease_NS PF01223.23 NODE_60108_length_275_cov_2.450000_g52168_i0forward_frame_1 - 0.031 14.1 0.4 0.035 13.9 0.4 1.0 1 0 0 1 1 1 0 DNA/RNA non-specific endonuclease Transp_cyt_pur PF02133.15 NODE_60106_length_275_cov_2.470833_g52166_i0reverse_frame_1 - 5.7e-09 35.3 0.1 6.9e-09 35.0 0.1 1.1 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin RRM_occluded PF16842.5 NODE_60106_length_275_cov_2.470833_g52166_i0forward_frame_1 - 0.037 13.9 0.0 0.09 12.7 0.0 1.6 1 1 1 2 2 2 0 Occluded RNA-recognition motif Pox_A21 PF05323.12 NODE_60102_length_275_cov_2.691667_g52162_i0forward_frame_1 - 0.0072 16.9 0.2 0.0089 16.6 0.2 1.2 1 0 0 1 1 1 1 Poxvirus A21 Protein Fibin PF15819.5 NODE_60101_length_275_cov_2.725000_g52161_i0reverse_frame_1 - 0.042 13.6 1.7 0.042 13.6 1.7 1.1 1 0 0 1 1 1 0 Fin bud initiation factor homologue DUF35_N PF12172.8 NODE_60097_length_275_cov_2.875000_g52157_i0reverse_frame_1 - 0.059 13.3 8.2 0.059 13.3 8.2 1.9 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Phage_ASH PF10554.9 NODE_60097_length_275_cov_2.875000_g52157_i0reverse_frame_1 - 0.063 13.6 0.0 0.084 13.2 0.0 1.2 1 0 0 1 1 1 0 Ash protein family PhzC-PhzF PF02567.16 NODE_60095_length_275_cov_2.987500_g52155_i0reverse_frame_1 - 0.00041 19.9 0.0 0.00051 19.6 0.0 1.1 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein DUF1272 PF06906.11 NODE_60092_length_275_cov_3.045833_g52152_i0reverse_frame_1 - 0.013 15.6 2.0 0.018 15.2 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) Cytokin_check_N PF10407.9 NODE_60088_length_275_cov_3.750000_g52148_i0forward_frame_1 - 0.0058 16.6 0.4 0.011 15.6 0.1 1.7 2 0 0 2 2 2 1 Cdc14 phosphatase binding protein N-terminus DUF5543 PF17697.1 NODE_60085_length_275_cov_12.725000_g52145_i0reverse_frame_1 - 0.085 13.1 0.4 0.099 12.9 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5543) HTH_ParB PF17762.1 NODE_60085_length_275_cov_12.725000_g52145_i0forward_frame_1 - 0.093 12.6 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 HTH domain found in ParB protein PUFD PF16553.5 NODE_60082_length_275_cov_21.654167_g52142_i0reverse_frame_1 - 0.075 13.2 0.2 0.086 13.0 0.2 1.2 1 0 0 1 1 1 0 BCORL-PCGF1-binding domain DUF1331 PF07048.11 NODE_60080_length_275_cov_25.841667_g52140_i0reverse_frame_1 - 0.16 11.7 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1331) Pkinase PF00069.25 NODE_60080_length_275_cov_25.841667_g52140_i0forward_frame_1 - 5.3e-08 32.5 0.0 5.9e-08 32.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_60080_length_275_cov_25.841667_g52140_i0forward_frame_1 - 0.00093 18.5 0.0 0.0012 18.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase PAN_1 PF00024.26 NODE_60076_length_275_cov_40.812500_g52136_i0reverse_frame_1 - 0.032 14.2 0.6 0.042 13.8 0.6 1.4 1 1 0 1 1 1 0 PAN domain FXa_inhibition PF14670.6 NODE_60076_length_275_cov_40.812500_g52136_i0forward_frame_1 - 0.061 13.6 3.0 0.061 13.6 3.0 2.5 1 1 1 2 2 2 0 Coagulation Factor Xa inhibitory site Gypsy PF07253.11 NODE_60076_length_275_cov_40.812500_g52136_i0forward_frame_1 - 4.5 5.7 5.7 5 5.5 5.7 1.1 1 0 0 1 1 1 0 Gypsy protein DUF4865 PF16157.5 NODE_60072_length_275_cov_46.925000_g52132_i0reverse_frame_1 - 0.088 12.8 4.8 0.1 12.6 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4865) DUF3316 PF11777.8 NODE_60072_length_275_cov_46.925000_g52132_i0reverse_frame_1 - 0.33 11.0 3.5 0.41 10.7 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3316) RGS_DHEX PF18148.1 NODE_60072_length_275_cov_46.925000_g52132_i0reverse_frame_1 - 1.4 9.1 11.2 0.15 12.2 5.1 1.9 1 1 1 2 2 2 0 Regulator of G-protein signalling DHEX domain DUF3767 PF12597.8 NODE_60067_length_275_cov_51.979167_g52127_i0reverse_frame_1 - 0.04 13.7 0.1 0.045 13.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) NfrA_C PF13283.6 NODE_60059_length_275_cov_67.258333_g52119_i0reverse_frame_1 - 0.14 11.6 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage N adsorption protein A C-term YMF19 PF02326.15 NODE_60057_length_275_cov_70.466667_g52117_i0reverse_frame_1 - 0.14 12.9 7.6 0.17 12.7 7.6 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 Caudal_act PF04731.12 NODE_60056_length_275_cov_70.500000_g52116_i0reverse_frame_1 - 0.15 12.4 2.4 3 8.2 2.4 2.0 1 1 0 1 1 1 0 Caudal like protein activation region SDH_sah PF01972.16 NODE_60055_length_275_cov_71.437500_g52115_i0reverse_frame_1 - 0.086 11.8 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DUF1726 PF08351.11 NODE_60054_length_275_cov_72.954167_g52114_i0forward_frame_1 - 0.17 11.9 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1726) HTH_27 PF13463.6 NODE_60053_length_275_cov_78.845833_g52113_i0forward_frame_1 - 0.16 12.5 0.0 0.3 11.6 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain GET2 PF08690.10 NODE_60052_length_275_cov_79.891667_g52112_i0forward_frame_1 - 0.76 9.4 4.2 0.84 9.3 4.2 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 DNA_pol_phi PF04931.13 NODE_60052_length_275_cov_79.891667_g52112_i0forward_frame_1 - 4.6 5.2 15.1 5.2 5.0 15.1 1.0 1 0 0 1 1 1 0 DNA polymerase phi DUF3784 PF12650.7 NODE_60050_length_275_cov_91.525000_g52110_i0forward_frame_1 - 3 8.1 13.1 1.2 9.4 7.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3784) SWIM PF04434.17 NODE_60049_length_275_cov_101.783333_g52109_i0reverse_frame_1 - 0.045 13.4 1.4 4.1 7.2 0.0 2.3 2 0 0 2 2 2 0 SWIM zinc finger DUF4632 PF15451.6 NODE_60049_length_275_cov_101.783333_g52109_i0forward_frame_1 - 0.07 13.2 0.8 0.1 12.7 0.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4632) SR-25 PF10500.9 NODE_60041_length_275_cov_408.250000_g52101_i0reverse_frame_1 - 0.023 14.3 18.3 0.029 14.0 18.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CobT PF06213.12 NODE_60041_length_275_cov_408.250000_g52101_i0reverse_frame_1 - 2.2 7.6 13.7 2.6 7.4 13.7 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Dsh_C PF12316.8 NODE_60041_length_275_cov_408.250000_g52101_i0reverse_frame_1 - 7 7.0 14.6 7.8 6.8 14.6 1.0 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal DUF4939 PF16297.5 NODE_60034_length_276_cov_1.066390_g52094_i0forward_frame_1 - 0.085 12.7 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4939) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks289.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks289.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks289.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks289.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- tRNA-synt_1d PF00750.19 ORF102339 - 3.7e-45 154.4 0.0 5.4e-45 153.8 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF102339 - 2.2e-27 95.6 0.1 4.3e-27 94.7 0.1 1.5 1 0 0 1 1 1 1 DALR anticodon binding domain PA PF02225.22 ORF100419 - 6.2e-08 32.5 0.0 2.1e-07 30.9 0.0 1.8 2 0 0 2 2 2 1 PA domain Thioredoxin_4 PF13462.6 ORF100419 - 0.082 13.1 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin Asp PF00026.23 ORF93341 - 4.5e-40 138.0 1.3 5.9e-40 137.6 1.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 ORF93341 - 0.00014 22.4 0.1 0.061 14.0 0.0 3.1 4 0 0 4 4 4 1 Aspartyl protease TAXi_C PF14541.6 ORF93341 - 0.0004 20.2 0.0 0.00092 19.0 0.0 1.6 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal gag-asp_proteas PF13975.6 ORF93341 - 0.03 14.9 0.0 1.1 9.9 0.0 2.7 2 1 0 2 2 2 0 gag-polyprotein putative aspartyl protease Phage_B PF02304.15 ORF93341 - 0.2 12.1 0.7 0.47 10.9 0.7 1.6 1 0 0 1 1 1 0 Scaffold protein B TMEM52 PF14979.6 ORF93341 - 0.44 10.5 5.6 0.78 9.7 5.6 1.3 1 0 0 1 1 1 0 Transmembrane 52 Prominin PF05478.11 ORF93341 - 0.79 7.6 9.5 1.2 7.0 9.5 1.1 1 0 0 1 1 1 0 Prominin JHBP PF06585.11 ORF92771 - 0.0014 17.8 0.6 0.0014 17.8 0.6 2.1 2 1 0 2 2 2 1 Haemolymph juvenile hormone binding protein (JHBP) LBP_BPI_CETP PF01273.25 ORF92771 - 0.016 14.8 0.1 0.043 13.4 0.1 1.8 1 1 0 1 1 1 0 LBP / BPI / CETP family, N-terminal domain PCC_BT PF18140.1 ORF92771 - 0.028 14.8 0.6 0.066 13.6 0.6 1.5 1 0 0 1 1 1 0 Propionyl-coenzyme A carboxylase BT domain PP_kinase_C_1 PF17941.1 ORF92771 - 0.12 12.0 0.5 0.24 11.0 0.5 1.4 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain 1 ApoB100_C PF12491.8 ORF90523 - 0.036 14.0 0.2 0.081 12.9 0.2 1.6 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal DUF948 PF06103.11 ORF90523 - 3.2 8.1 5.1 18 5.7 0.4 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) WzyE PF06899.11 ORF8975 - 3.3e-264 876.7 46.2 3.8e-264 876.5 46.2 1.0 1 0 0 1 1 1 1 WzyE protein, O-antigen assembly polymerase Pyridoxal_deC PF00282.19 ORF85013 - 3.7e-45 154.3 0.1 4.9e-45 153.9 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 ORF85013 - 8.4e-06 25.3 0.1 2.3e-05 23.8 0.1 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 ORF85013 - 0.0016 17.5 0.0 0.0029 16.6 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class-V DUF4253 PF14062.6 ORF85013 - 0.094 12.9 0.0 0.24 11.6 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) DUF4202 PF13875.6 ORF85013 - 0.12 12.2 0.1 0.74 9.7 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4202) DUF763 PF05559.11 ORF85013 - 0.14 11.3 0.2 0.28 10.3 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF763) SBBP PF06739.11 ORF75616 - 0.0019 18.2 10.2 0.019 14.9 0.1 4.6 5 0 0 5 5 5 2 Beta-propeller repeat DUF3672 PF12421.8 ORF75616 - 0.021 14.7 0.3 0.93 9.4 0.1 2.4 2 0 0 2 2 2 0 Fibronectin type III protein Alpha_GJ PF03229.13 ORF75616 - 2.2 8.8 6.5 4.7 7.8 6.5 1.5 1 0 0 1 1 1 0 Alphavirus glycoprotein J Pkinase PF00069.25 ORF70855 - 2.8e-66 223.6 0.0 3.6e-66 223.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70855 - 9.6e-27 93.9 0.0 1.4e-26 93.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF70855 - 2.7e-05 23.6 0.1 0.00023 20.6 0.0 2.1 2 0 0 2 2 2 1 Kinase-like DUF4335 PF14233.6 ORF70855 - 0.002 18.1 0.0 0.022 14.7 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) Kdo PF06293.14 ORF70855 - 0.0036 16.7 0.0 0.0054 16.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF70855 - 0.0043 16.7 0.1 3.1 7.3 0.0 2.4 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 KA1 PF02149.19 ORF70855 - 0.014 15.2 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 APH PF01636.23 ORF70855 - 0.049 13.6 0.0 0.086 12.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF70855 - 0.076 11.8 0.0 0.14 10.9 0.0 1.4 1 0 0 1 1 1 0 Fungal protein kinase ABC_tran PF00005.27 ORF68488 - 5.5e-34 117.6 1.4 9e-34 116.9 0.0 2.1 2 0 0 2 2 2 1 ABC transporter ABC_membrane PF00664.23 ORF68488 - 1.8e-13 50.8 0.5 2.8e-13 50.1 0.5 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF68488 - 1.9e-11 43.8 0.3 9.6e-10 38.3 0.0 2.3 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF68488 - 4.7e-05 23.3 5.0 8.4e-05 22.4 5.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 ORF68488 - 0.00015 21.6 0.0 0.013 15.3 0.0 2.3 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF68488 - 0.0012 18.7 0.0 0.0032 17.4 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 ORF68488 - 0.002 18.4 0.0 0.0085 16.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF68488 - 0.0026 16.9 0.0 0.0051 16.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) MMR_HSR1 PF01926.23 ORF68488 - 0.0065 16.5 0.6 0.028 14.5 0.6 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase Zeta_toxin PF06414.12 ORF68488 - 0.0067 15.7 0.0 0.015 14.6 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_29 PF13555.6 ORF68488 - 0.011 15.4 0.1 0.031 14.0 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF68488 - 0.019 15.3 1.2 0.053 13.9 1.2 2.0 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 ORF68488 - 0.021 14.9 0.1 0.021 14.9 0.1 2.8 3 1 1 4 4 4 0 AAA domain DUF87 PF01935.17 ORF68488 - 0.025 14.7 0.1 0.025 14.7 0.1 2.5 2 1 0 2 2 2 0 Helicase HerA, central domain AAA_24 PF13479.6 ORF68488 - 0.036 13.8 0.0 0.07 12.8 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF68488 - 0.062 12.8 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_23 PF13476.6 ORF68488 - 1.5 9.3 19.5 78 3.7 19.5 2.6 1 1 0 1 1 1 0 AAA domain Asp PF00026.23 ORF68409 - 4.9e-09 36.0 0.3 1.7e-06 27.7 0.0 2.9 1 1 1 2 2 2 2 Eukaryotic aspartyl protease DUF3443 PF11925.8 ORF68409 - 0.078 11.8 0.0 0.13 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3443) TAXi_C PF14541.6 ORF68409 - 0.18 11.5 0.0 1.4 8.6 0.0 2.1 2 0 0 2 2 2 0 Xylanase inhibitor C-terminal Pkinase PF00069.25 ORF67920 - 2.5e-66 223.8 0.1 7.9e-66 222.1 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67920 - 2.5e-28 99.1 0.0 3.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF67920 - 6.1e-05 22.5 0.0 0.0001 21.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF67920 - 0.00018 20.9 0.0 0.00035 20.0 0.0 1.5 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF67920 - 0.0032 16.3 0.0 0.0057 15.5 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF67920 - 0.007 16.0 0.1 0.43 10.2 0.0 2.4 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF67920 - 0.02 13.8 0.0 0.032 13.2 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 ORF67920 - 0.056 13.4 0.0 0.096 12.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4959 PF16323.5 ORF67920 - 0.15 12.4 0.3 0.27 11.6 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4959) KA1 PF02149.19 ORF67920 - 0.16 11.8 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 Pkinase PF00069.25 ORF62642 - 2.8e-66 223.6 0.0 3.6e-66 223.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62642 - 9.6e-27 93.9 0.0 1.4e-26 93.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF62642 - 2.7e-05 23.6 0.1 0.00023 20.6 0.0 2.1 2 0 0 2 2 2 1 Kinase-like DUF4335 PF14233.6 ORF62642 - 0.002 18.1 0.0 0.022 14.7 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) Kdo PF06293.14 ORF62642 - 0.0036 16.7 0.0 0.0054 16.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF62642 - 0.0043 16.7 0.1 3.1 7.3 0.0 2.4 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 KA1 PF02149.19 ORF62642 - 0.014 15.2 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 APH PF01636.23 ORF62642 - 0.049 13.6 0.0 0.086 12.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF62642 - 0.076 11.8 0.0 0.14 10.9 0.0 1.4 1 0 0 1 1 1 0 Fungal protein kinase Ion_trans_2 PF07885.16 ORF591 - 2.5e-13 49.8 4.6 2.5e-13 49.8 4.6 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF591 - 4.1e-10 39.6 0.9 5.8e-08 32.7 0.2 2.5 2 0 0 2 2 2 2 Calcium-activated SK potassium channel Bax1-I PF01027.20 ORF591 - 0.00053 19.9 2.8 0.00053 19.9 2.8 2.1 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 Lig_chan PF00060.26 ORF591 - 0.0016 18.3 3.4 0.0044 16.9 3.2 1.8 1 1 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF591 - 0.0017 17.6 15.7 0.0044 16.3 15.7 1.8 1 1 0 1 1 1 1 Ion transport protein DUF2963 PF11178.8 ORF591 - 0.073 12.8 0.1 0.21 11.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) Pkinase PF00069.25 ORF57050 - 2.8e-66 223.6 0.0 3.6e-66 223.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57050 - 9.6e-27 93.9 0.0 1.4e-26 93.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF57050 - 2.7e-05 23.6 0.1 0.00023 20.6 0.0 2.1 2 0 0 2 2 2 1 Kinase-like DUF4335 PF14233.6 ORF57050 - 0.002 18.1 0.0 0.022 14.7 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) Kdo PF06293.14 ORF57050 - 0.0036 16.7 0.0 0.0054 16.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF57050 - 0.0043 16.7 0.1 3.1 7.3 0.0 2.4 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 KA1 PF02149.19 ORF57050 - 0.014 15.2 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 APH PF01636.23 ORF57050 - 0.049 13.6 0.0 0.086 12.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF57050 - 0.076 11.8 0.0 0.14 10.9 0.0 1.4 1 0 0 1 1 1 0 Fungal protein kinase Pkinase PF00069.25 ORF5566 - 2.8e-66 223.6 0.0 3.6e-66 223.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF5566 - 9.6e-27 93.9 0.0 1.4e-26 93.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF5566 - 2.7e-05 23.6 0.1 0.00023 20.6 0.0 2.1 2 0 0 2 2 2 1 Kinase-like DUF4335 PF14233.6 ORF5566 - 0.002 18.1 0.0 0.022 14.7 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) Kdo PF06293.14 ORF5566 - 0.0036 16.7 0.0 0.0054 16.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF5566 - 0.0043 16.7 0.1 3.1 7.3 0.0 2.4 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 KA1 PF02149.19 ORF5566 - 0.014 15.2 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 APH PF01636.23 ORF5566 - 0.049 13.6 0.0 0.086 12.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF5566 - 0.076 11.8 0.0 0.14 10.9 0.0 1.4 1 0 0 1 1 1 0 Fungal protein kinase Ion_trans_2 PF07885.16 ORF52604 - 2.5e-13 49.8 4.6 2.5e-13 49.8 4.6 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF52604 - 4.1e-10 39.6 0.9 5.8e-08 32.7 0.2 2.5 2 0 0 2 2 2 2 Calcium-activated SK potassium channel Bax1-I PF01027.20 ORF52604 - 0.00053 19.9 2.8 0.00053 19.9 2.8 2.1 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 Lig_chan PF00060.26 ORF52604 - 0.0016 18.3 3.4 0.0044 16.9 3.2 1.8 1 1 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF52604 - 0.0017 17.6 15.7 0.0044 16.3 15.7 1.8 1 1 0 1 1 1 1 Ion transport protein DUF2963 PF11178.8 ORF52604 - 0.073 12.8 0.1 0.21 11.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) Pkinase PF00069.25 ORF48175 - 2.5e-66 223.8 0.1 7.9e-66 222.1 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF48175 - 2.5e-28 99.1 0.0 3.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF48175 - 6.1e-05 22.5 0.0 0.0001 21.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF48175 - 0.00018 20.9 0.0 0.00035 20.0 0.0 1.5 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF48175 - 0.0032 16.3 0.0 0.0057 15.5 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF48175 - 0.007 16.0 0.1 0.43 10.2 0.0 2.4 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF48175 - 0.02 13.8 0.0 0.032 13.2 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 ORF48175 - 0.056 13.4 0.0 0.096 12.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4959 PF16323.5 ORF48175 - 0.15 12.4 0.3 0.27 11.6 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4959) KA1 PF02149.19 ORF48175 - 0.16 11.8 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 Ion_trans PF00520.31 ORF45643 - 3.7e-10 39.4 16.8 3.7e-10 39.4 16.8 2.6 2 1 0 2 2 2 1 Ion transport protein PKD_channel PF08016.12 ORF45643 - 3.8e-05 22.6 13.1 3.8e-05 22.6 13.1 1.8 2 0 0 2 2 2 1 Polycystin cation channel Pkinase PF00069.25 ORF42775 - 2.8e-66 223.6 0.0 3.6e-66 223.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42775 - 9.6e-27 93.9 0.0 1.4e-26 93.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF42775 - 2.7e-05 23.6 0.1 0.00023 20.6 0.0 2.1 2 0 0 2 2 2 1 Kinase-like DUF4335 PF14233.6 ORF42775 - 0.002 18.1 0.0 0.022 14.7 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) Kdo PF06293.14 ORF42775 - 0.0036 16.7 0.0 0.0054 16.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF42775 - 0.0043 16.7 0.1 3.1 7.3 0.0 2.4 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 KA1 PF02149.19 ORF42775 - 0.014 15.2 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 APH PF01636.23 ORF42775 - 0.049 13.6 0.0 0.086 12.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF42775 - 0.076 11.8 0.0 0.14 10.9 0.0 1.4 1 0 0 1 1 1 0 Fungal protein kinase Pkinase PF00069.25 ORF38821 - 2.5e-66 223.8 0.1 7.9e-66 222.1 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF38821 - 2.5e-28 99.1 0.0 3.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF38821 - 6.1e-05 22.5 0.0 0.0001 21.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF38821 - 0.00018 20.9 0.0 0.00035 20.0 0.0 1.5 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF38821 - 0.0032 16.3 0.0 0.0057 15.5 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF38821 - 0.007 16.0 0.1 0.43 10.2 0.0 2.4 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF38821 - 0.02 13.8 0.0 0.032 13.2 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 ORF38821 - 0.056 13.4 0.0 0.096 12.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4959 PF16323.5 ORF38821 - 0.15 12.4 0.3 0.27 11.6 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4959) KA1 PF02149.19 ORF38821 - 0.16 11.8 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 ApoB100_C PF12491.8 ORF34956 - 0.036 14.0 0.2 0.081 12.9 0.2 1.6 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal DUF948 PF06103.11 ORF34956 - 3.2 8.1 5.1 18 5.7 0.4 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) adh_short_C2 PF13561.6 ORF27924 - 1.5e-45 155.6 0.1 2.2e-45 155.1 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF27924 - 1e-42 145.8 0.4 1.4e-42 145.4 0.4 1.2 1 0 0 1 1 1 1 short chain dehydrogenase zf-C3HC4_3 PF13920.6 ORF27924 - 1.1e-09 38.0 14.5 3.1e-09 36.5 14.5 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) KR PF08659.10 ORF27924 - 4.1e-08 33.3 0.2 2.7e-06 27.4 0.2 2.2 2 0 0 2 2 2 1 KR domain zf-C3HC4_2 PF13923.6 ORF27924 - 1.8e-07 30.9 17.4 4e-07 29.8 17.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF27924 - 1.4e-06 28.0 17.8 3.6e-06 26.8 17.8 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF27924 - 2.9e-06 27.2 9.9 2.9e-06 27.2 9.9 2.3 1 1 1 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF27924 - 5.1e-06 26.3 14.4 1e-05 25.3 14.4 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF27924 - 5.6e-06 26.6 16.8 5.6e-06 26.6 16.8 2.0 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 ORF27924 - 4.6e-05 23.3 16.3 0.00012 21.9 16.3 1.8 1 0 0 1 1 1 1 zinc-RING finger domain ADH_zinc_N PF00107.26 ORF27924 - 0.00013 21.9 0.4 0.00032 20.7 0.4 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase zf-C3HC4_4 PF15227.6 ORF27924 - 0.0031 17.6 18.0 0.0079 16.3 18.0 1.7 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Epimerase PF01370.21 ORF27924 - 0.0071 15.8 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 ORF27924 - 0.0082 16.0 0.3 0.02 14.8 0.3 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF27924 - 0.016 15.5 0.2 0.029 14.6 0.2 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain zf-RING_6 PF14835.6 ORF27924 - 0.033 14.1 7.6 0.08 12.8 7.6 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_4 PF14570.6 ORF27924 - 0.048 13.5 16.3 0.18 11.6 16.3 2.0 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Ion_trans_2 PF07885.16 ORF151505 - 2.5e-13 49.8 4.6 2.5e-13 49.8 4.6 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF151505 - 4.1e-10 39.6 0.9 5.8e-08 32.7 0.2 2.5 2 0 0 2 2 2 2 Calcium-activated SK potassium channel Bax1-I PF01027.20 ORF151505 - 0.00053 19.9 2.8 0.00053 19.9 2.8 2.1 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 Lig_chan PF00060.26 ORF151505 - 0.0016 18.3 3.4 0.0044 16.9 3.2 1.8 1 1 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF151505 - 0.0017 17.6 15.7 0.0044 16.3 15.7 1.8 1 1 0 1 1 1 1 Ion transport protein DUF2963 PF11178.8 ORF151505 - 0.073 12.8 0.1 0.21 11.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) Glyco_trans_2_3 PF13632.6 ORF150223 - 1e-14 54.9 1.1 1e-14 54.9 1.1 1.9 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Cellulose_synt PF03552.14 ORF150223 - 1e-13 50.7 2.7 2.5e-13 49.5 2.5 1.6 1 1 1 2 2 2 1 Cellulose synthase PilZ PF07238.14 ORF150223 - 8e-13 48.6 0.1 1.6e-12 47.7 0.1 1.5 1 0 0 1 1 1 1 PilZ domain Glyco_tranf_2_3 PF13641.6 ORF150223 - 7.1e-08 32.6 0.1 1.2e-07 31.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 ORF150223 - 9.6e-07 28.4 0.1 1.8e-06 27.6 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Insulin_TMD PF17870.1 ORF150223 - 0.56 10.3 2.4 4.1 7.6 0.2 2.6 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Pkinase PF00069.25 ORF138168 - 2.8e-66 223.6 0.0 3.6e-66 223.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF138168 - 9.6e-27 93.9 0.0 1.4e-26 93.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF138168 - 2.7e-05 23.6 0.1 0.00023 20.6 0.0 2.1 2 0 0 2 2 2 1 Kinase-like DUF4335 PF14233.6 ORF138168 - 0.002 18.1 0.0 0.022 14.7 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4335) Kdo PF06293.14 ORF138168 - 0.0036 16.7 0.0 0.0054 16.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF138168 - 0.0043 16.7 0.1 3.1 7.3 0.0 2.4 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 KA1 PF02149.19 ORF138168 - 0.014 15.2 0.0 0.028 14.2 0.0 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 APH PF01636.23 ORF138168 - 0.049 13.6 0.0 0.086 12.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF138168 - 0.076 11.8 0.0 0.14 10.9 0.0 1.4 1 0 0 1 1 1 0 Fungal protein kinase Ion_trans PF00520.31 ORF133918 - 2e-24 86.2 13.4 3.1e-24 85.6 13.4 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF133918 - 8.8e-12 44.8 7.1 2.2e-11 43.6 7.1 1.7 1 0 0 1 1 1 1 Ion channel EF-hand_1 PF00036.32 ORF133918 - 6.6e-07 28.4 0.3 0.0039 16.6 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF133918 - 2.7e-05 23.7 0.3 0.27 11.3 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF133918 - 3.5e-05 23.5 2.2 0.00076 19.3 0.2 2.6 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF133918 - 0.00025 21.5 2.6 0.096 13.2 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF133918 - 0.043 13.3 0.0 0.24 11.0 0.0 2.2 3 0 0 3 3 3 0 EF hand Pyr_redox_2 PF07992.14 ORF131271 - 3.6e-69 233.2 1.7 3.6e-69 233.2 1.7 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF131271 - 8.5e-37 125.8 1.1 1.1e-35 122.2 0.4 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 ORF131271 - 2.7e-18 66.3 1.5 4.5e-18 65.6 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF131271 - 9.2e-16 58.0 2.9 5.8e-15 55.3 2.9 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF131271 - 0.00041 19.6 1.2 0.0081 15.3 0.1 2.4 2 0 0 2 2 2 1 Glucose inhibited division protein A HI0933_like PF03486.14 ORF131271 - 0.0097 14.7 0.6 8.8 4.9 0.6 3.0 3 0 0 3 3 3 2 HI0933-like protein AlaDh_PNT_C PF01262.21 ORF131271 - 0.014 14.7 0.9 0.16 11.3 0.0 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 ORF131271 - 0.022 13.8 4.7 0.84 8.6 0.1 2.6 3 0 0 3 3 3 0 FAD binding domain FAD_oxidored PF12831.7 ORF131271 - 0.031 13.6 0.1 0.13 11.5 0.1 1.9 2 0 0 2 2 2 0 FAD dependent oxidoreductase PsaF PF17550.2 ORF131271 - 0.051 13.1 0.0 3 7.3 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function K_oxygenase PF13434.6 ORF131271 - 0.16 11.1 0.0 0.32 10.1 0.0 1.5 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) tRNA-synt_1d PF00750.19 ORF12250 - 1.9e-164 546.7 0.7 2.4e-164 546.4 0.7 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF12250 - 3.5e-36 124.0 0.2 1.8e-35 121.7 0.3 2.0 2 0 0 2 2 2 1 DALR anticodon binding domain Thiol_cytolys_C PF17440.2 ORF12250 - 0.045 13.9 0.5 0.094 12.9 0.5 1.5 1 0 0 1 1 1 0 Thiol-activated cytolysin beta sandwich domain tRNA-synt_1e PF01406.19 ORF12250 - 0.052 12.9 0.1 0.075 12.4 0.1 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain Ribosomal_L20 PF00453.18 ORF12250 - 0.074 13.2 0.1 0.16 12.0 0.1 1.5 1 0 0 1 1 1 0 Ribosomal protein L20 Tub PF01167.18 ORF108193 - 1e-58 198.9 2.4 1e-58 198.9 2.4 1.6 2 0 0 2 2 2 1 Tub family YqbF PF14553.6 ORF108193 - 0.038 13.8 0.3 0.086 12.7 0.3 1.6 1 0 0 1 1 1 0 YqbF, hypothetical protein domain YpsA PF06908.11 ORF108193 - 0.081 12.9 2.5 0.083 12.9 0.4 2.0 2 0 0 2 2 2 0 YspA SLOG family Nuc_deoxyri_tr2 PF15891.5 ORF108193 - 0.29 11.4 2.6 0.6 10.4 0.6 2.4 2 0 0 2 2 2 0 Nucleoside 2-deoxyribosyltransferase like Ion_trans_2 PF07885.16 ORF10122 - 2.5e-13 49.8 4.6 2.5e-13 49.8 4.6 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF10122 - 4.1e-10 39.6 0.9 5.8e-08 32.7 0.2 2.5 2 0 0 2 2 2 2 Calcium-activated SK potassium channel Bax1-I PF01027.20 ORF10122 - 0.00053 19.9 2.8 0.00053 19.9 2.8 2.1 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 Lig_chan PF00060.26 ORF10122 - 0.0016 18.3 3.4 0.0044 16.9 3.2 1.8 1 1 0 1 1 1 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF10122 - 0.0017 17.6 15.7 0.0044 16.3 15.7 1.8 1 1 0 1 1 1 1 Ion transport protein DUF2963 PF11178.8 ORF10122 - 0.073 12.8 0.1 0.21 11.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) Cyt-b5 PF00173.28 ORF94375 - 5.3e-22 77.8 0.0 8.8e-22 77.0 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Sdh_cyt PF01127.22 ORF94375 - 0.0056 16.7 14.7 0.48 10.5 4.2 2.8 1 1 1 2 2 2 2 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF1439 PF07273.12 ORF81668 - 0.012 15.5 0.5 0.96 9.3 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1439) MFS_1 PF07690.16 ORF78116 - 3.7e-18 65.6 19.6 3.7e-18 65.6 19.6 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily tRNA-synt_1d PF00750.19 ORF64075 - 3.7e-45 154.4 0.0 5.4e-45 153.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF64075 - 2.1e-27 95.6 0.1 4.2e-27 94.7 0.1 1.5 1 0 0 1 1 1 1 DALR anticodon binding domain Acetyltransf_16 PF05301.11 ORF62919 - 1.7e-18 67.0 0.9 2.9e-18 66.2 0.9 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Rep_fac-A_C PF08646.10 ORF62919 - 0.11 12.3 0.3 0.2 11.4 0.3 1.4 1 0 0 1 1 1 0 Replication factor-A C terminal domain CPSase_L_D2 PF02786.17 ORF56013 - 1.5e-86 289.3 0.0 2.3e-86 288.7 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 ORF56013 - 2.6e-44 150.2 0.1 5.6e-44 149.2 0.1 1.6 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 ORF56013 - 3.5e-38 130.0 0.0 6.9e-38 129.1 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATP-grasp_3 PF02655.14 ORF56013 - 1.3e-07 31.8 0.0 2.3e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 ORF56013 - 1.6e-07 31.1 0.0 4.3e-07 29.7 0.0 1.7 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 ORF56013 - 3e-07 30.2 0.0 5.8e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 ORF56013 - 0.036 13.8 0.0 0.062 13.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_4 PF13535.6 ORF56013 - 0.098 12.3 0.0 0.52 9.9 0.0 2.1 3 1 1 4 4 4 0 ATP-grasp domain PUF PF00806.19 ORF55663 - 4.7e-10 38.6 4.5 7.5e-05 22.2 0.2 3.6 3 0 0 3 3 3 2 Pumilio-family RNA binding repeat DUF249 PF03158.13 ORF55663 - 0.0041 16.9 0.7 0.007 16.1 0.7 1.4 1 0 0 1 1 1 1 Multigene family 530 protein LAGLIDADG_WhiA PF14527.6 ORF55663 - 0.03 14.4 0.2 0.073 13.1 0.2 1.7 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain DUF5408 PF17402.2 ORF55663 - 0.056 13.3 0.0 0.16 11.9 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5408) Pox_A3L PF05288.11 ORF55663 - 0.11 12.5 0.1 0.38 10.8 0.1 1.9 1 0 0 1 1 1 0 Poxvirus A3L Protein DnaGprimase_HBD PF16730.5 ORF55663 - 0.67 10.0 4.7 1.5 8.9 0.1 2.8 3 0 0 3 3 3 0 DnaG-primase C-terminal, helicase-binding domain Aa_trans PF01490.18 ORF41101 - 5.8e-46 157.0 22.1 6.7e-46 156.8 22.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein TTL PF03133.15 ORF40884 - 1.4e-44 152.4 4.5 3.8e-42 144.4 4.5 2.1 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF40884 - 2.3e-09 36.9 2.6 4.4e-05 22.9 0.0 3.3 2 1 1 3 3 3 3 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF40884 - 2.4e-06 27.0 0.2 6.7e-05 22.3 0.0 2.5 3 0 0 3 3 3 1 Sugar-transfer associated ATP-grasp RE_Alw26IDE PF09665.10 ORF40884 - 0.0011 18.2 0.0 0.0024 17.1 0.0 1.5 1 0 0 1 1 1 1 Type II restriction endonuclease (RE_Alw26IDE) Dala_Dala_lig_C PF07478.13 ORF40884 - 0.015 14.8 0.8 0.029 13.9 0.0 1.7 2 0 0 2 2 2 0 D-ala D-ala ligase C-terminus FtsH_ext PF06480.15 ORF40884 - 0.22 11.9 2.2 0.54 10.6 0.4 2.6 2 1 0 2 2 2 0 FtsH Extracellular Piezo_RRas_bdg PF12166.8 ORF38121 - 8.6e-68 229.6 7.5 1e-67 229.3 7.5 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain HECT PF00632.25 ORF38121 - 0.00032 20.3 1.1 0.0015 18.0 1.1 2.0 1 1 0 1 1 1 1 HECT-domain (ubiquitin-transferase) EF-hand_6 PF13405.6 ORF36451 - 3.2e-09 36.0 0.0 0.004 17.0 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF36451 - 4.5e-09 35.2 0.4 0.0018 17.7 0.0 2.8 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF36451 - 4.8e-09 35.9 0.2 7e-05 22.6 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF36451 - 1.7e-08 34.8 0.8 4.4e-08 33.5 0.8 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF36451 - 2.1e-08 33.3 2.7 0.0029 17.0 0.0 3.0 3 0 0 3 3 3 2 EF hand Ion_trans PF00520.31 ORF36451 - 9.2e-08 31.6 0.1 1.3e-07 31.1 0.1 1.1 1 0 0 1 1 1 1 Ion transport protein pKID PF02173.17 ORF35255 - 0.78 9.3 5.3 0.43 10.1 1.5 2.6 2 0 0 2 2 2 0 pKID domain Ricin_B_lectin PF00652.22 ORF33449 - 1.5e-15 57.6 0.3 3.4e-14 53.2 0.1 2.8 2 1 0 2 2 2 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF33449 - 0.00024 21.8 1.0 0.0028 18.3 0.4 2.9 1 1 0 2 2 2 1 Ricin-type beta-trefoil lectin domain-like Acyl_transf_3 PF01757.22 ORF31944 - 4.8e-13 48.9 31.4 6e-13 48.6 31.4 1.1 1 0 0 1 1 1 1 Acyltransferase family bZIP_1 PF00170.21 ORF25605 - 7.5e-07 29.2 13.3 7.5e-07 29.2 13.3 3.0 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF25605 - 1.8e-06 27.9 13.4 1.8e-06 27.9 13.4 2.9 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF25605 - 0.053 13.3 1.1 0.11 12.3 1.1 1.4 1 0 0 1 1 1 0 Peptidase M76 family DUF5320 PF17253.2 ORF25605 - 3 9.0 5.3 0.82 10.8 1.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5320) bZIP_1 PF00170.21 ORF18655 - 7.5e-07 29.2 13.3 7.5e-07 29.2 13.3 3.0 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF18655 - 1.8e-06 27.9 13.4 1.8e-06 27.9 13.4 2.9 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF18655 - 0.053 13.3 1.1 0.11 12.3 1.1 1.4 1 0 0 1 1 1 0 Peptidase M76 family DUF5320 PF17253.2 ORF18655 - 3 9.0 5.3 0.82 10.8 1.1 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Peptidase_C13 PF01650.18 ORF15194 - 3.8e-94 315.0 0.0 5.5e-94 314.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase C13 family VWA_3 PF13768.6 ORF149312 - 8.6e-08 32.3 0.0 1.5e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF149312 - 0.00064 20.0 0.0 0.0017 18.6 0.0 1.8 1 1 0 1 1 1 1 von Willebrand factor type A domain Retrotran_gag_2 PF14223.6 ORF149312 - 0.069 12.8 1.7 11 5.7 0.0 3.1 2 1 1 3 3 3 0 gag-polypeptide of LTR copia-type tRNA-synt_1d PF00750.19 ORF147399 - 3.7e-45 154.4 0.0 5.4e-45 153.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF147399 - 2.1e-27 95.6 0.1 4.2e-27 94.7 0.1 1.5 1 0 0 1 1 1 1 DALR anticodon binding domain Toluene_X PF03349.16 ORF139868 - 9.4e-156 518.7 16.7 1.1e-155 518.5 16.7 1.0 1 0 0 1 1 1 1 Outer membrane protein transport protein (OMPP1/FadL/TodX) DUF2490 PF10677.9 ORF139868 - 0.0069 16.4 7.6 0.73 9.8 0.0 4.1 2 1 1 4 4 4 3 Protein of unknown function (DUF2490) YadA_anchor PF03895.15 ORF139868 - 0.016 15.3 14.8 0.11 12.6 0.0 5.5 4 3 2 6 6 6 0 YadA-like membrane anchor domain MBOAT PF03062.19 ORF13773 - 3.4e-25 89.1 21.1 3.4e-25 89.1 21.1 1.9 2 0 0 2 2 2 1 MBOAT, membrane-bound O-acyltransferase family MBOAT_2 PF13813.6 ORF13773 - 4.8e-06 26.8 1.9 1.5e-05 25.2 1.9 1.8 1 0 0 1 1 1 1 Membrane bound O-acyl transferase family tRNA-synt_1d PF00750.19 ORF125263 - 3.7e-45 154.4 0.0 5.4e-45 153.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 ORF125263 - 2.1e-27 95.6 0.1 4.2e-27 94.7 0.1 1.5 1 0 0 1 1 1 1 DALR anticodon binding domain JAB PF01398.21 ORF12307 - 1.8e-06 27.9 0.5 3.9e-06 26.8 0.5 1.5 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Acetyltransf_16 PF05301.11 ORF111105 - 1.7e-18 67.0 0.9 2.9e-18 66.2 0.9 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Rep_fac-A_C PF08646.10 ORF111105 - 0.11 12.3 0.3 0.2 11.4 0.3 1.4 1 0 0 1 1 1 0 Replication factor-A C terminal domain Pkinase PF00069.25 ORF101413 - 1.8e-66 224.2 0.0 2.4e-66 223.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF101413 - 1.1e-29 103.6 0.0 1.6e-29 103.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF101413 - 4.2e-05 23.0 0.0 0.0001 21.7 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF101413 - 7.1e-05 22.3 0.0 0.00011 21.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF101413 - 0.04 13.5 0.1 0.16 11.5 0.1 1.9 2 0 0 2 2 2 0 Choline/ethanolamine kinase APH PF01636.23 ORF101413 - 0.081 12.8 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF101413 - 0.082 11.7 0.0 0.15 10.8 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase Fungal_KA1 PF16797.5 ORF101413 - 0.17 11.6 0.1 0.43 10.3 0.1 1.7 1 0 0 1 1 1 0 Fungal kinase associated-1 domain Occludin_ELL PF07303.13 ORF77441 - 0.0011 19.6 16.8 0.013 16.2 4.5 3.7 3 2 1 4 4 4 2 Occludin homology domain DUF1216 PF06746.11 ORF77441 - 0.012 15.6 6.6 0.012 15.6 6.6 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1216) BLOC1_2 PF10046.9 ORF77441 - 0.013 15.8 0.2 0.013 15.8 0.2 3.6 3 2 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 COX16 PF14138.6 ORF77441 - 0.13 12.8 2.2 0.89 10.1 2.2 2.4 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein COX16 DUF3573 PF12097.8 ORF77441 - 1 8.1 10.1 0.059 12.2 3.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3573) Prominin PF05478.11 ORF77441 - 8.1 4.3 18.9 0.091 10.7 2.9 2.3 2 0 0 2 2 2 0 Prominin Adenylsucc_synt PF00709.21 ORF59833 - 5.1e-167 556.0 0.0 5.8e-167 555.9 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Nse4-Nse3_bdg PF15412.6 ORF59833 - 0.035 14.2 0.0 0.1 12.7 0.0 1.7 1 0 0 1 1 1 0 Binding domain of Nse4/EID3 to Nse3-MAGE PPTA PF01239.22 ORF58368 - 2.8e-39 131.7 13.6 2.5e-09 36.6 0.1 5.8 5 0 0 5 5 5 5 Protein prenyltransferase alpha subunit repeat Amidase_3 PF01520.18 ORF56347 - 1.4e-50 171.8 0.3 2.1e-50 171.2 0.3 1.3 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase AMIN PF11741.8 ORF56347 - 6.1e-26 90.4 0.1 1.1e-25 89.5 0.1 1.5 1 0 0 1 1 1 1 AMIN domain Peptidase_C1 PF00112.23 ORF49104 - 2.8e-17 63.6 0.0 8.5e-17 62.0 0.0 1.7 1 1 0 1 1 1 1 Papain family cysteine protease EF-hand_7 PF13499.6 ORF49104 - 5.9e-10 39.5 0.1 1.2e-09 38.5 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF49104 - 2.3e-09 36.2 0.4 0.00098 18.5 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF49104 - 1.3e-08 34.1 1.3 0.00051 19.8 0.2 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF49104 - 4.5e-06 26.4 0.8 0.016 15.0 0.1 2.5 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF49104 - 0.0011 18.4 0.6 1.1 8.9 0.0 2.5 2 0 0 2 2 2 2 EF hand Peptidase_C39_2 PF13529.6 ORF49104 - 0.002 18.7 0.0 0.0079 16.7 0.0 2.0 2 0 0 2 2 2 1 Peptidase_C39 like family Peptidase_C1_2 PF03051.15 ORF49104 - 0.011 14.6 0.2 0.25 10.1 0.1 2.1 2 0 0 2 2 2 0 Peptidase C1-like family EF-hand_4 PF12763.7 ORF49104 - 0.045 13.7 0.0 0.41 10.6 0.0 2.2 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Tfb4 PF03850.14 ORF49104 - 0.078 12.5 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Transcription factor Tfb4 Nucleoside_tran PF01733.18 ORF39359 - 3.9e-35 121.7 6.1 3.9e-35 121.7 6.1 1.7 2 0 0 2 2 2 1 Nucleoside transporter DUF5413 PF17434.2 ORF39359 - 0.0015 18.9 7.4 0.014 15.7 3.0 2.6 2 0 0 2 2 2 1 Family of unknown function (DUF5413) Sid-5 PF17204.3 ORF39359 - 0.082 13.1 0.0 0.33 11.1 0.0 2.0 1 0 0 1 1 1 0 Sid-5 family TMCO5 PF14992.6 ORF39359 - 0.15 11.6 0.1 0.22 11.1 0.1 1.2 1 0 0 1 1 1 0 TMCO5 family TMEM135_C_rich PF15982.5 ORF39359 - 0.84 10.2 6.8 4.6 7.9 0.8 2.8 2 0 0 2 2 2 0 N-terminal cysteine-rich region of Transmembrane protein 135 GWT1 PF06423.12 ORF39359 - 1.4 9.0 6.0 0.47 10.6 0.2 2.6 2 1 0 2 2 2 0 GWT1 Polysacc_deac_1 PF01522.21 ORF32935 - 1.3e-09 38.0 0.0 2.4e-09 37.2 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Ureidogly_lyase PF04115.12 ORF32935 - 0.0063 16.3 0.0 0.01 15.6 0.0 1.4 1 0 0 1 1 1 1 Ureidoglycolate lyase DUF2334 PF10096.9 ORF32935 - 0.011 15.4 0.0 0.017 14.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Glyco_hydro_57 PF03065.15 ORF32935 - 0.064 12.4 0.0 2 7.5 0.0 2.1 1 1 0 2 2 2 0 Glycosyl hydrolase family 57 DUF2020 PF09449.10 ORF32935 - 0.097 12.5 0.0 0.26 11.1 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF2020) RecA PF00154.21 ORF32067 - 8.4e-142 471.2 2.5 1.3e-141 470.6 2.5 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Rad51 PF08423.11 ORF32067 - 4.7e-12 45.7 0.5 1.4e-11 44.2 0.5 1.6 1 1 0 1 1 1 1 Rad51 ATPase PF06745.13 ORF32067 - 1.6e-09 37.5 0.3 5e-08 32.6 0.3 2.7 1 1 0 1 1 1 1 KaiC AAA_24 PF13479.6 ORF32067 - 1.1e-05 25.2 0.0 1.9e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 ORF32067 - 6.5e-05 23.0 0.0 0.00014 21.8 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 ORF32067 - 0.00063 20.2 0.0 0.0011 19.3 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 ORF32067 - 0.0012 18.4 0.6 0.054 13.1 0.6 2.4 1 1 0 1 1 1 1 AAA domain AAA_35 PF14516.6 ORF32067 - 0.016 14.1 0.0 0.026 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain CbiA PF01656.23 ORF32067 - 0.019 15.0 0.0 0.042 13.9 0.0 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain PAXNEB PF05625.11 ORF32067 - 0.022 13.9 0.6 0.035 13.3 0.6 1.2 1 0 0 1 1 1 0 PAXNEB protein MobB PF03205.14 ORF32067 - 0.053 13.4 0.0 0.15 11.9 0.0 1.9 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_22 PF13401.6 ORF32067 - 0.058 13.7 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 ORF32067 - 0.059 13.8 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Ribosomal_S24e PF01282.19 ORF32067 - 0.072 13.0 0.0 0.75 9.8 0.0 2.5 2 0 0 2 2 2 0 Ribosomal protein S24e CobU PF02283.16 ORF32067 - 0.084 12.4 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_14 PF13173.6 ORF32067 - 0.088 12.8 0.0 0.24 11.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain TK PF00265.18 ORF32067 - 0.098 12.5 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Thymidine kinase ScsC_N PF18312.1 ORF32067 - 0.16 11.8 0.1 0.49 10.2 0.1 1.9 1 0 0 1 1 1 0 Copper resistance protein ScsC N-terminal domain Zip PF02535.22 ORF314 - 1.1 8.4 5.3 1.8 7.7 5.3 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter Paramyxo_ncap PF00973.19 ORF314 - 6.9 5.5 12.2 12 4.7 12.2 1.2 1 0 0 1 1 1 0 Paramyxovirus nucleocapsid protein Kinesin PF00225.23 ORF26181 - 1.2e-111 372.9 3.8 1.2e-111 372.9 3.8 1.5 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF26181 - 4.3e-25 88.4 1.8 4.9e-25 88.2 0.3 1.9 2 0 0 2 2 2 1 Microtubule binding WES_acyltransf PF03007.16 ORF21978 - 5.3e-10 39.5 0.0 7.3e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF21978 - 1.6e-07 31.4 0.4 1.6e-07 31.4 0.4 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1298) Asp PF00026.23 ORF21541 - 1.5e-40 139.6 3.1 1.9e-40 139.2 3.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF21541 - 0.00023 21.5 1.0 0.62 10.3 0.5 2.5 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal gag-asp_proteas PF13975.6 ORF21541 - 0.15 12.6 0.1 5.4 7.6 0.1 3.0 2 1 0 2 2 2 0 gag-polyprotein putative aspartyl protease Ion_trans PF00520.31 ORF18162 - 9.9e-20 70.8 23.9 1.3e-19 70.4 23.9 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF18162 - 7.5e-05 23.1 0.9 0.02 15.3 0.1 2.3 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF18162 - 0.00018 20.8 1.5 0.0011 18.4 0.1 3.0 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF18162 - 0.003 17.4 0.3 0.029 14.3 0.0 2.7 2 0 0 2 2 2 1 EF-hand domain PKD_channel PF08016.12 ORF18162 - 0.0043 15.8 18.7 0.009 14.7 10.0 2.5 2 0 0 2 2 2 2 Polycystin cation channel EF-hand_5 PF13202.6 ORF18162 - 0.07 12.7 0.1 0.23 11.0 0.1 1.9 1 0 0 1 1 1 0 EF hand Alpha-amylase PF00128.24 ORF144383 - 4.1e-54 184.4 2.5 9e-54 183.3 2.5 1.5 1 1 0 1 1 1 1 Alpha amylase, catalytic domain GHL10 PF02638.15 ORF144383 - 0.0014 17.8 0.1 0.0042 16.2 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolase-like 10 DUF1971 PF09313.11 ORF144383 - 0.074 13.1 0.0 0.23 11.5 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF1971) DUF1966 PF09260.11 ORF144383 - 0.16 12.2 0.2 0.4 11.0 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1966) DUF1479 PF07350.12 ORF135843 - 2.5e-144 481.1 0.0 3e-144 480.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1479) COMP PF11598.8 ORF135843 - 0.11 13.0 0.1 0.23 12.0 0.1 1.5 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein Ank_2 PF12796.7 ORF123715 - 2.9e-13 50.2 1.1 7e-11 42.6 0.1 3.0 2 1 1 3 3 3 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF123715 - 3.2e-09 36.9 0.3 8.4e-06 26.0 0.2 3.4 2 1 0 3 3 3 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF123715 - 5.4e-09 36.4 1.7 2.9e-06 27.7 0.1 3.6 3 1 1 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF123715 - 1.3e-08 34.4 2.7 0.00095 19.4 0.0 4.7 4 0 0 4 4 4 1 Ankyrin repeat Ank PF00023.30 ORF123715 - 3.9e-08 33.4 6.5 7.1e-05 23.1 0.1 4.1 4 0 0 4 4 4 2 Ankyrin repeat Atg14 PF10186.9 ORF123715 - 0.59 9.2 15.7 1.1 8.2 15.7 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 PPR_2 PF13041.6 ORF115535 - 4.9e-08 33.1 0.0 0.0017 18.5 0.0 4.3 5 1 1 6 6 6 2 PPR repeat family PPR_3 PF13812.6 ORF115535 - 0.00025 21.0 0.0 0.23 11.5 0.0 3.3 4 0 0 4 4 4 2 Pentatricopeptide repeat domain gpD PF02925.16 ORF115535 - 0.013 15.5 0.0 0.025 14.6 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage scaffolding protein D PPR_1 PF12854.7 ORF115535 - 0.022 14.4 0.0 0.47 10.2 0.0 3.1 3 0 0 3 3 3 0 PPR repeat PPR PF01535.20 ORF115535 - 0.049 13.9 0.0 1.3 9.4 0.0 3.2 3 0 0 3 3 3 0 PPR repeat POT1 PF02765.17 ORF111381 - 3.7e-46 156.5 9.3 3.6e-44 150.1 1.1 2.5 2 0 0 2 2 2 2 Telomeric single stranded DNA binding POT1/CDC13 tRNA_anti-codon PF01336.25 ORF111381 - 0.014 15.3 0.3 3.7 7.6 0.1 3.5 3 1 0 3 3 3 0 OB-fold nucleic acid binding domain T4BSS_DotH_IcmK PF12293.8 ORF111381 - 0.11 11.7 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion PPTA PF01239.22 ORF111381 - 0.14 11.9 0.2 3.4 7.5 0.0 3.0 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat Tubulin PF00091.25 ORF104172 - 4.1e-64 216.4 0.0 5.6e-64 216.0 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF104172 - 1.1e-49 167.8 0.1 1.8e-49 167.1 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF104172 - 0.033 13.9 0.0 0.11 12.1 0.0 2.0 3 0 0 3 3 3 0 Tubulin domain MIP-T3 PF10243.9 ORF83142 - 2.5e-42 143.4 0.1 2.5e-42 143.4 0.1 2.3 2 0 0 2 2 2 1 Microtubule-binding protein MIP-T3 CH-like domain MIP-T3_C PF17749.1 ORF83142 - 2.2e-36 125.1 7.0 2.2e-36 125.1 7.0 3.7 4 1 0 4 4 4 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF83142 - 0.019 15.2 5.9 0.019 15.2 5.9 2.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family HrcA_DNA-bdg PF03444.15 ORF83142 - 0.1 12.3 1.0 1.2 8.9 0.3 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AAA_13 PF13166.6 ORF83142 - 2.4 6.7 25.6 0.27 9.8 2.4 2.1 2 0 0 2 2 2 0 AAA domain Pkinase PF00069.25 ORF76150 - 1.6e-79 267.0 0.1 2.1e-79 266.6 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF76150 - 7.3e-42 143.4 0.0 1e-41 143.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase POLO_box PF00659.18 ORF76150 - 7.3e-13 48.5 1.1 2e-12 47.1 0.4 2.2 2 0 0 2 2 2 1 POLO box duplicated region Kinase-like PF14531.6 ORF76150 - 4.9e-09 35.9 0.0 2.5e-07 30.3 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF76150 - 3.5e-06 26.0 0.0 6.3e-06 25.2 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kinase-PolyVal PF18762.1 ORF76150 - 0.0075 16.2 0.4 0.015 15.2 0.4 1.5 1 0 0 1 1 1 1 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins Haspin_kinase PF12330.8 ORF76150 - 0.014 14.4 0.2 0.025 13.5 0.2 1.4 1 0 0 1 1 1 0 Haspin like kinase domain Inos-1-P_synth PF01658.17 ORF76150 - 0.065 13.5 0.4 0.25 11.6 0.2 2.1 2 0 0 2 2 2 0 Myo-inositol-1-phosphate synthase APH PF01636.23 ORF76150 - 0.11 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF76150 - 0.16 11.3 0.0 0.27 10.6 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Ald_Xan_dh_C2 PF02738.18 ORF72779 - 7.4e-104 348.2 0.1 8.5e-104 348.0 0.1 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase 4PPT_N PF17837.1 ORF72779 - 0.1 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 4'-phosphopantetheinyl transferase N-terminal domain Endomucin PF07010.12 ORF66256 - 1.5 8.7 43.4 2.3 8.1 43.4 1.2 1 0 0 1 1 1 0 Endomucin Utp14 PF04615.13 ORF66256 - 6.8 5.1 9.3 8.8 4.8 9.3 1.0 1 0 0 1 1 1 0 Utp14 protein UDPGT PF00201.18 ORF59348 - 3.3e-17 62.5 0.0 9e-17 61.0 0.0 1.7 2 1 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF59348 - 2e-05 24.7 0.0 3.7e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain DUF1664 PF07889.12 ORF47703 - 0.0097 15.9 1.2 0.0097 15.9 1.2 5.0 3 2 0 4 4 4 1 Protein of unknown function (DUF1664) DUF508 PF04370.12 ORF47703 - 0.016 15.0 0.1 0.034 13.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF508) UpxZ PF06603.11 ORF47703 - 0.044 14.1 0.1 0.15 12.3 0.1 1.9 1 0 0 1 1 1 0 UpxZ family of transcription anti-terminator antagonists Tropomyosin_1 PF12718.7 ORF47703 - 0.076 13.2 24.7 1.6 8.9 2.0 4.2 2 1 1 4 4 4 0 Tropomyosin like IMS PF00817.20 ORF47703 - 0.71 9.9 3.7 0.55 10.2 0.2 2.2 1 1 1 2 2 2 0 impB/mucB/samB family DUF4795 PF16043.5 ORF47703 - 0.84 9.2 26.9 1.8 8.1 1.2 3.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4795) PIG-P PF08510.12 ORF47703 - 0.95 9.4 3.0 6.8 6.6 0.1 2.7 3 0 0 3 3 3 0 PIG-P BLOC1_2 PF10046.9 ORF47703 - 2.7 8.3 20.8 3.4 8.0 1.8 4.6 4 2 0 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Tnp_22_trimer PF17489.2 ORF47703 - 2.9 7.9 12.7 10 6.2 0.2 5.0 6 0 0 6 6 6 0 L1 transposable element trimerization domain BRI3BP PF14965.6 ORF47703 - 3.2 7.3 6.0 3.3 7.2 0.1 3.0 4 0 0 4 4 4 0 Negative regulator of p53/TP53 TMPIT PF07851.13 ORF47703 - 5.8 6.1 23.1 2.3 7.4 4.2 3.5 2 1 0 3 3 3 0 TMPIT-like protein Fib_alpha PF08702.10 ORF47703 - 8.8 6.5 30.4 1.6 9.0 1.0 3.9 3 1 0 3 3 3 0 Fibrinogen alpha/beta chain family Syntaxin-6_N PF09177.11 ORF47703 - 9.9 6.8 18.7 1.3e+02 3.2 8.1 4.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal LBP_BPI_CETP PF01273.25 ORF4731 - 0.17 11.5 1.5 0.72 9.4 0.2 2.6 2 2 1 3 3 3 0 LBP / BPI / CETP family, N-terminal domain CbiA PF01656.23 ORF45874 - 0.004 17.2 0.0 0.0056 16.7 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 ORF45874 - 0.17 11.7 0.0 0.38 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain Asp PF00026.23 ORF45557 - 5.7e-16 58.8 0.4 7.6e-16 58.4 0.4 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Shisa PF13908.6 ORF45557 - 0.0014 18.9 0.0 0.0026 18.0 0.0 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF1218 PF06749.12 ORF45557 - 0.067 13.7 0.2 0.14 12.7 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1218) Tweety PF04906.13 ORF45557 - 0.098 11.3 0.6 0.15 10.7 0.6 1.2 1 0 0 1 1 1 0 Tweety FixS PF03597.15 ORF40470 - 0.62 9.8 7.8 1.8 8.4 0.0 2.4 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type Pkinase PF00069.25 ORF40331 - 4.7e-60 203.2 0.0 6.1e-60 202.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF40331 - 3.7e-30 105.1 0.0 5.3e-30 104.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF40331 - 0.019 14.3 0.0 0.11 11.8 0.0 1.9 2 0 0 2 2 2 0 Kinase-like APH PF01636.23 ORF40331 - 0.053 13.4 0.0 0.086 12.8 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF40331 - 0.066 12.0 0.0 0.1 11.3 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Fungal_KA1 PF16797.5 ORF40331 - 0.12 12.1 0.0 0.29 10.8 0.0 1.6 1 0 0 1 1 1 0 Fungal kinase associated-1 domain Arginosuc_synth PF00764.19 ORF24177 - 8.6e-57 193.2 0.0 1.1e-56 192.9 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 ORF24177 - 0.023 14.2 0.0 0.044 13.3 0.0 1.5 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC KH_1 PF00013.29 ORF23631 - 2e-22 78.8 4.8 9.6e-12 44.6 0.5 2.5 2 0 0 2 2 2 2 KH domain zf-CCHC PF00098.23 ORF23631 - 8e-08 32.0 6.8 0.00021 21.2 0.6 2.7 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 ORF23631 - 3.6e-05 23.6 4.9 0.021 14.8 0.5 2.3 1 1 1 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF23631 - 0.0087 15.8 4.4 0.87 9.4 0.4 2.3 2 0 0 2 2 2 2 Zinc knuckle KH_2 PF07650.17 ORF23631 - 0.098 12.5 0.7 13 5.7 0.1 2.5 2 0 0 2 2 2 0 KH domain zf-CCHC_5 PF14787.6 ORF23631 - 3.2 7.6 5.6 1 9.2 0.3 2.5 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger zf-CCHC_6 PF15288.6 ORF23631 - 5.3 7.0 7.3 0.68 9.8 0.6 2.4 2 0 0 2 2 2 0 Zinc knuckle MIP-T3 PF10243.9 ORF17927 - 2.5e-42 143.4 0.1 2.5e-42 143.4 0.1 2.3 2 0 0 2 2 2 1 Microtubule-binding protein MIP-T3 CH-like domain MIP-T3_C PF17749.1 ORF17927 - 2.2e-36 125.1 7.0 2.2e-36 125.1 7.0 3.7 4 1 0 4 4 4 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF17927 - 0.019 15.2 5.9 0.019 15.2 5.9 2.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family HrcA_DNA-bdg PF03444.15 ORF17927 - 0.1 12.3 1.0 1.2 8.9 0.3 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AAA_13 PF13166.6 ORF17927 - 2.4 6.7 25.6 0.27 9.8 2.4 2.1 2 0 0 2 2 2 0 AAA domain Phos_pyr_kin PF08543.12 ORF17270 - 2.5e-18 66.3 0.0 4e-18 65.7 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 ORF17270 - 2.5e-07 30.3 0.2 9.7e-07 28.4 0.2 1.8 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 ORF17270 - 0.027 13.9 0.1 0.095 12.2 0.0 1.7 2 0 0 2 2 2 0 Carbohydrate kinase Aminotran_3 PF00202.21 ORF151329 - 2.7e-80 270.0 0.0 3.3e-80 269.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III TPP_enzyme_C PF02775.21 ORF147028 - 2.4e-48 163.8 0.1 4.9e-48 162.8 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF147028 - 1.5e-46 157.5 1.1 2.4e-46 156.9 0.3 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_N PF02776.18 ORF147028 - 5.1e-14 52.3 0.2 1.9e-13 50.4 0.0 2.1 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CO_dh PF02552.16 ORF147028 - 0.0096 15.7 0.1 0.018 14.8 0.1 1.5 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit XFP_N PF09364.10 ORF147028 - 0.083 11.7 0.0 0.13 11.0 0.0 1.2 1 0 0 1 1 1 0 XFP N-terminal domain KH_1 PF00013.29 ORF146480 - 2e-22 78.8 4.8 9.6e-12 44.6 0.5 2.5 2 0 0 2 2 2 2 KH domain zf-CCHC PF00098.23 ORF146480 - 8e-08 32.0 6.8 0.00021 21.2 0.6 2.7 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 ORF146480 - 3.6e-05 23.6 4.9 0.021 14.8 0.5 2.3 1 1 1 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF146480 - 0.0087 15.8 4.4 0.87 9.4 0.4 2.3 2 0 0 2 2 2 2 Zinc knuckle KH_2 PF07650.17 ORF146480 - 0.098 12.5 0.7 13 5.7 0.1 2.5 2 0 0 2 2 2 0 KH domain zf-CCHC_5 PF14787.6 ORF146480 - 3.2 7.6 5.6 1 9.2 0.3 2.5 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger zf-CCHC_6 PF15288.6 ORF146480 - 5.3 7.0 7.3 0.68 9.8 0.6 2.4 2 0 0 2 2 2 0 Zinc knuckle FHA PF00498.26 ORF145515 - 3.1e-11 43.4 0.1 1.1e-10 41.7 0.1 2.0 1 0 0 1 1 1 1 FHA domain RINGv PF12906.7 ORF145515 - 3.5e-11 43.0 8.4 7.6e-11 42.0 8.4 1.6 1 1 0 1 1 1 1 RING-variant domain Yop-YscD_cpl PF16697.5 ORF145515 - 1.3e-07 31.9 0.0 2.6e-06 27.6 0.0 2.9 3 0 0 3 3 3 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 ORF145515 - 0.054 13.7 8.1 0.11 12.7 8.1 1.5 1 0 0 1 1 1 0 FANCL C-terminal domain MRP-S32 PF10210.9 ORF145515 - 0.21 12.1 2.5 0.79 10.3 0.3 2.8 3 0 0 3 3 3 0 Mitochondrial 28S ribosomal protein S32 zf-RING_2 PF13639.6 ORF145515 - 6.7 7.1 8.3 17 5.8 8.3 1.7 1 1 0 1 1 1 0 Ring finger domain KAP PF05804.12 ORF141122 - 6.2e-95 318.9 15.1 7.6e-95 318.6 15.1 1.1 1 0 0 1 1 1 1 Kinesin-associated protein (KAP) HEAT_2 PF13646.6 ORF141122 - 0.006 16.9 0.1 3.5 8.1 0.0 4.0 5 0 0 5 5 5 1 HEAT repeats DUF2258 PF10015.9 ORF141122 - 0.024 14.8 2.1 1.4 9.1 0.3 2.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) HEAT PF02985.22 ORF141122 - 0.04 14.2 0.0 0.2 12.0 0.0 2.3 1 0 0 1 1 1 0 HEAT repeat RICTOR_M PF14666.6 ORF141122 - 0.075 12.8 3.4 0.49 10.2 0.1 3.0 2 1 1 3 3 3 0 Rapamycin-insensitive companion of mTOR, middle domain Med26 PF08711.11 ORF141122 - 0.075 13.1 0.1 0.23 11.5 0.1 1.9 1 0 0 1 1 1 0 TFIIS helical bundle-like domain Sugar_tr PF00083.24 ORF140733 - 6.8e-14 51.6 0.1 1.4e-13 50.5 0.1 1.5 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF140733 - 0.00017 20.7 5.5 0.00017 20.7 5.5 2.5 1 1 0 1 1 1 1 Major Facilitator Superfamily PRKCSH PF07915.13 ORF131761 - 3.9e-18 66.2 0.0 2.9e-10 41.0 0.0 2.3 2 0 0 2 2 2 2 Glucosidase II beta subunit-like protein PRKCSH_1 PF13015.6 ORF131761 - 0.00016 21.4 0.0 0.013 15.2 0.0 2.9 3 0 0 3 3 3 1 Glucosidase II beta subunit-like protein HSF_DNA-bind PF00447.17 ORF126988 - 8.5e-28 96.8 2.8 8.5e-28 96.8 2.8 3.2 3 1 0 3 3 3 1 HSF-type DNA-binding ISG65-75 PF11727.8 ORF126988 - 0.2 10.8 3.1 0.36 10.0 3.1 1.3 1 0 0 1 1 1 0 Invariant surface glycoprotein TetR PF13972.6 ORF126988 - 0.25 11.1 3.5 2.3 7.9 0.8 2.3 2 0 0 2 2 2 0 Bacterial transcriptional repressor Hom_end_hint PF05203.16 ORF126988 - 1.9 8.3 10.6 20 5.1 10.5 2.2 1 1 0 1 1 1 0 Hom_end-associated Hint CDC37_N PF03234.14 ORF126988 - 3.6 8.5 11.6 6.4 7.7 4.5 2.6 1 1 1 2 2 2 0 Cdc37 N terminal kinase binding KH_1 PF00013.29 ORF123181 - 2e-22 78.8 4.8 9.6e-12 44.6 0.5 2.5 2 0 0 2 2 2 2 KH domain zf-CCHC PF00098.23 ORF123181 - 8e-08 32.0 6.8 0.00021 21.2 0.6 2.7 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 ORF123181 - 3.6e-05 23.6 4.9 0.021 14.8 0.5 2.3 1 1 1 2 2 2 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF123181 - 0.0087 15.8 4.4 0.87 9.4 0.4 2.3 2 0 0 2 2 2 2 Zinc knuckle KH_2 PF07650.17 ORF123181 - 0.098 12.5 0.7 13 5.7 0.1 2.5 2 0 0 2 2 2 0 KH domain zf-CCHC_5 PF14787.6 ORF123181 - 3.2 7.6 5.6 1 9.2 0.3 2.5 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger zf-CCHC_6 PF15288.6 ORF123181 - 5.3 7.0 7.3 0.68 9.8 0.6 2.4 2 0 0 2 2 2 0 Zinc knuckle PGM_PMM_III PF02880.16 ORF122023 - 2.3e-23 82.6 0.0 4.2e-23 81.7 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 ORF122023 - 8.2e-06 26.4 0.0 2.8e-05 24.7 0.0 1.9 1 1 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 ORF122023 - 0.0004 20.5 0.0 0.00092 19.3 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Pyr_redox_2 PF07992.14 ORF114564 - 1.6e-16 60.4 0.0 2.6e-16 59.7 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF114564 - 7.6e-09 36.0 0.0 2.5e-07 31.2 0.0 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DUF1188 PF06690.11 ORF114564 - 0.00016 21.3 0.0 0.029 13.9 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1188) DAO PF01266.24 ORF114564 - 0.018 14.7 0.0 6 6.4 0.0 2.9 2 1 0 3 3 3 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF114564 - 0.04 14.2 0.0 3 8.1 0.0 3.0 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF114564 - 0.2 10.9 0.0 2.7 7.2 0.0 2.2 2 0 0 2 2 2 0 Thi4 family Sugar_tr PF00083.24 ORF110102 - 2.7e-13 49.6 4.2 9e-13 47.9 4.2 1.8 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF110102 - 4.9e-06 25.7 10.0 8.1e-06 25.0 9.7 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily PIRT PF15099.6 ORF110102 - 0.1 12.1 1.6 2.6 7.7 0.1 2.5 2 0 0 2 2 2 0 Phosphoinositide-interacting protein family Rhodanese PF00581.20 ORF93778 - 3.7e-08 33.8 0.0 8.4e-08 32.7 0.0 1.6 1 0 0 1 1 1 1 Rhodanese-like domain zf-C3HC4_3 PF13920.6 ORF86928 - 2.9e-05 23.8 9.8 2.9e-05 23.8 9.8 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF86928 - 0.0002 21.1 14.5 0.00033 20.4 14.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF86928 - 0.0003 21.1 13.6 0.00051 20.3 13.6 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_10 PF16685.5 ORF86928 - 0.00084 19.4 7.8 0.0016 18.5 7.8 1.4 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-C3HC4 PF00097.25 ORF86928 - 0.0099 15.7 11.8 0.016 15.0 11.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 ORF86928 - 0.012 15.4 3.7 0.029 14.2 3.7 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-C3HC4_4 PF15227.6 ORF86928 - 0.027 14.6 13.0 0.046 13.9 13.0 1.4 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF86928 - 0.16 11.9 9.2 0.31 11.1 9.2 1.5 1 0 0 1 1 1 0 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF86928 - 0.44 10.6 12.3 0.78 9.8 12.3 1.4 1 0 0 1 1 1 0 RING-type zinc-finger zf-Nse PF11789.8 ORF86928 - 3.7 7.4 5.8 7.6 6.4 5.8 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-rbx1 PF12678.7 ORF86928 - 8.5 6.7 13.4 22 5.4 13.4 1.7 1 1 0 1 1 1 0 RING-H2 zinc finger domain RCC1_2 PF13540.6 ORF81144 - 1.1e-11 44.2 34.5 0.26 11.2 0.4 9.4 9 0 0 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF81144 - 3.2e-05 24.2 0.6 38 4.7 0.1 6.2 4 2 2 6 6 6 1 TFIIH p62 subunit, N-terminal domain Spectrin PF00435.21 ORF81144 - 0.0003 21.2 0.0 89 3.6 0.0 6.1 7 0 0 7 7 7 0 Spectrin repeat DUF4874 PF16173.5 ORF81144 - 0.012 15.3 0.9 0.1 12.3 0.0 2.6 3 1 0 3 3 3 0 Domain of unknown function (DUF4874) Peptidase_C69 PF03577.15 ORF78728 - 6.2e-40 137.3 0.5 7.5e-40 137.1 0.5 1.0 1 0 0 1 1 1 1 Peptidase family C69 Tme5_EGF_like PF09064.10 ORF78728 - 0.29 11.1 2.7 0.51 10.3 2.7 1.3 1 0 0 1 1 1 0 Thrombomodulin like fifth domain, EGF-like BCCT PF02028.17 ORF71504 - 3.5e-108 362.2 35.3 3.9e-108 362.0 35.3 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter MFS_1 PF07690.16 ORF65569 - 4.9e-30 104.7 25.9 8e-25 87.5 25.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF65569 - 1.1e-05 24.5 9.2 1.1e-05 24.5 9.2 2.9 1 1 1 3 3 3 2 Sugar (and other) transporter MFS_3 PF05977.13 ORF65569 - 0.00044 18.8 5.6 0.0028 16.1 5.4 2.0 1 1 0 1 1 1 1 Transmembrane secretion effector Pam17 PF08566.10 ORF65569 - 1.3 8.9 3.9 3 7.7 0.5 3.0 3 0 0 3 3 3 0 Mitochondrial import protein Pam17 Brr6_like_C_C PF10104.9 ORF65569 - 9.9 6.0 7.9 1.7 8.5 0.4 3.4 3 0 0 3 3 3 0 Di-sulfide bridge nucleocytoplasmic transport domain Cation_ATPase_C PF00689.21 ORF65020 - 7.8e-48 162.6 3.8 1.1e-47 162.2 3.8 1.2 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF65020 - 1.9e-11 44.7 1.0 1.4e-10 41.8 1.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF65020 - 8.4e-05 22.4 1.0 0.00013 21.9 1.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase TMEM208_SND2 PF05620.11 ORF65020 - 2.1 8.1 3.9 3.3 7.4 0.1 2.4 3 0 0 3 3 3 0 SRP-independent targeting protein 2/TMEM208 Pribosyltran_N PF13793.6 ORF60434 - 1.6e-47 160.2 0.6 1.3e-46 157.3 0.1 2.4 3 0 0 3 3 3 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 ORF60434 - 5.5e-29 101.5 0.2 1.4e-28 100.2 0.2 1.7 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 ORF60434 - 1.7e-12 47.1 0.3 3.7e-12 46.0 0.3 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain SIS PF01380.22 ORF60434 - 0.11 12.4 0.0 3.1 7.7 0.0 2.3 2 0 0 2 2 2 0 SIS domain Chitin_synth_2 PF03142.15 ORF46529 - 0.094 11.3 0.1 0.14 10.8 0.1 1.1 1 0 0 1 1 1 0 Chitin synthase DUF4820 PF16091.5 ORF46529 - 3.2 7.1 5.8 5.8 6.2 5.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) EF-hand_7 PF13499.6 ORF31290 - 1.6e-07 31.6 6.1 0.00013 22.3 0.5 5.0 3 2 1 4 4 4 2 EF-hand domain pair EF-hand_13 PF17958.1 ORF31290 - 4.2e-07 29.7 0.3 2.8e-06 27.0 0.1 2.5 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF31290 - 0.0033 16.9 0.2 5 6.9 0.0 4.5 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF31290 - 0.006 16.4 4.6 5.5 7.2 0.0 5.3 4 0 0 4 4 4 1 EF-hand domain AAA PF00004.29 ORF25167 - 4.4e-42 143.6 0.0 1.2e-41 142.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF25167 - 1.4e-10 40.8 0.9 2.6e-10 39.9 0.9 1.4 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 ORF25167 - 1.9e-09 37.3 0.0 3.6e-09 36.4 0.0 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_22 PF13401.6 ORF25167 - 2.9e-06 27.6 0.2 0.0041 17.4 0.1 2.5 1 1 1 2 2 2 2 AAA domain AAA_2 PF07724.14 ORF25167 - 4.9e-06 26.8 0.0 1.2e-05 25.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 ORF25167 - 1.3e-05 24.5 0.0 2.4e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_5 PF07728.14 ORF25167 - 0.00014 21.9 0.1 0.00065 19.7 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF25167 - 0.00018 21.9 0.1 0.00088 19.7 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 ORF25167 - 0.0014 18.4 0.0 0.0028 17.4 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain ATPase PF06745.13 ORF25167 - 0.0032 16.9 0.1 0.13 11.6 0.0 2.4 1 1 0 2 2 2 1 KaiC IstB_IS21 PF01695.17 ORF25167 - 0.0095 15.7 0.0 0.018 14.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein TIP49 PF06068.13 ORF25167 - 0.021 14.1 0.2 0.052 12.8 0.1 1.6 1 1 1 2 2 2 0 TIP49 P-loop domain AAA_24 PF13479.6 ORF25167 - 0.023 14.4 0.1 0.078 12.7 0.1 2.0 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF25167 - 0.023 15.1 0.0 0.051 14.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF25167 - 0.024 14.4 0.1 0.12 12.0 0.0 2.1 3 0 0 3 3 2 0 Sigma-54 interaction domain Prot_ATP_OB_N PF17758.1 ORF25167 - 0.026 14.2 0.2 0.074 12.7 0.0 1.9 2 0 0 2 2 1 0 Proteasomal ATPase OB N-terminal domain NACHT PF05729.12 ORF25167 - 0.027 14.4 0.1 0.24 11.3 0.1 2.2 1 1 1 2 2 2 0 NACHT domain AAA_3 PF07726.11 ORF25167 - 0.033 14.0 0.0 0.094 12.6 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF1128 PF06569.11 ORF25167 - 0.05 13.6 0.0 0.96 9.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1128) PhoH PF02562.16 ORF25167 - 0.05 13.0 0.2 0.29 10.6 0.1 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_14 PF13173.6 ORF25167 - 0.05 13.6 0.1 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 ORF25167 - 0.057 13.0 0.5 1.4 8.4 0.1 2.3 1 1 0 2 2 2 0 AAA domain AAA_28 PF13521.6 ORF25167 - 0.075 13.3 1.2 0.16 12.2 0.0 2.2 3 0 0 3 3 2 0 AAA domain AAA_33 PF13671.6 ORF25167 - 0.088 13.0 1.8 0.14 12.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF25167 - 0.088 12.0 0.1 0.84 8.8 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain Mg_chelatase PF01078.21 ORF25167 - 0.096 12.1 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TsaE PF02367.17 ORF25167 - 0.12 12.4 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 ORF25167 - 0.14 11.7 0.0 0.39 10.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF25167 - 0.14 12.6 0.0 0.37 11.3 0.0 2.0 1 1 0 1 1 1 0 ABC transporter AAA_30 PF13604.6 ORF25167 - 0.16 11.6 0.2 0.39 10.4 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF25167 - 0.33 11.5 0.0 0.33 11.5 0.0 2.8 3 0 0 3 3 2 0 AAA domain TrbE PF11100.8 ORF19426 - 0.079 13.2 0.8 0.079 13.2 0.8 2.5 2 0 0 2 2 2 0 Conjugal transfer protein TrbE Chitin_synth_2 PF03142.15 ORF150856 - 0.094 11.3 0.1 0.14 10.8 0.1 1.1 1 0 0 1 1 1 0 Chitin synthase DUF4820 PF16091.5 ORF150856 - 3.2 7.1 5.8 5.8 6.2 5.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) ATP-synt_ab PF00006.25 ORF140824 - 2.9e-48 164.4 0.0 3.7e-48 164.0 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 ORF140824 - 4e-23 82.1 0.3 6.1e-23 81.5 0.3 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain AAA PF00004.29 ORF140078 - 4.4e-42 143.6 0.0 1.2e-41 142.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF140078 - 1.4e-10 40.8 0.9 2.6e-10 39.9 0.9 1.4 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 ORF140078 - 1.9e-09 37.3 0.0 3.6e-09 36.4 0.0 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_22 PF13401.6 ORF140078 - 2.9e-06 27.6 0.2 0.0041 17.4 0.1 2.5 1 1 1 2 2 2 2 AAA domain AAA_2 PF07724.14 ORF140078 - 4.9e-06 26.8 0.0 1.2e-05 25.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 ORF140078 - 1.3e-05 24.5 0.0 2.4e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_5 PF07728.14 ORF140078 - 0.00014 21.9 0.1 0.00065 19.7 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF140078 - 0.00018 21.9 0.1 0.00088 19.7 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 ORF140078 - 0.0014 18.4 0.0 0.0028 17.4 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain ATPase PF06745.13 ORF140078 - 0.0032 16.9 0.1 0.13 11.6 0.0 2.4 1 1 0 2 2 2 1 KaiC IstB_IS21 PF01695.17 ORF140078 - 0.0095 15.7 0.0 0.018 14.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein TIP49 PF06068.13 ORF140078 - 0.021 14.1 0.2 0.052 12.8 0.1 1.6 1 1 1 2 2 2 0 TIP49 P-loop domain AAA_24 PF13479.6 ORF140078 - 0.023 14.4 0.1 0.078 12.7 0.1 2.0 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF140078 - 0.023 15.1 0.0 0.051 14.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF140078 - 0.024 14.4 0.1 0.12 12.0 0.0 2.1 3 0 0 3 3 2 0 Sigma-54 interaction domain Prot_ATP_OB_N PF17758.1 ORF140078 - 0.026 14.2 0.2 0.074 12.7 0.0 1.9 2 0 0 2 2 1 0 Proteasomal ATPase OB N-terminal domain NACHT PF05729.12 ORF140078 - 0.027 14.4 0.1 0.24 11.3 0.1 2.2 1 1 1 2 2 2 0 NACHT domain AAA_3 PF07726.11 ORF140078 - 0.033 14.0 0.0 0.094 12.6 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF1128 PF06569.11 ORF140078 - 0.05 13.6 0.0 0.96 9.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1128) PhoH PF02562.16 ORF140078 - 0.05 13.0 0.2 0.29 10.6 0.1 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_14 PF13173.6 ORF140078 - 0.05 13.6 0.1 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 ORF140078 - 0.057 13.0 0.5 1.4 8.4 0.1 2.3 1 1 0 2 2 2 0 AAA domain AAA_28 PF13521.6 ORF140078 - 0.075 13.3 1.2 0.16 12.2 0.0 2.2 3 0 0 3 3 2 0 AAA domain AAA_33 PF13671.6 ORF140078 - 0.088 13.0 1.8 0.14 12.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 ORF140078 - 0.088 12.0 0.1 0.84 8.8 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain Mg_chelatase PF01078.21 ORF140078 - 0.096 12.1 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TsaE PF02367.17 ORF140078 - 0.12 12.4 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 ORF140078 - 0.14 11.7 0.0 0.39 10.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF140078 - 0.14 12.6 0.0 0.37 11.3 0.0 2.0 1 1 0 1 1 1 0 ABC transporter AAA_30 PF13604.6 ORF140078 - 0.16 11.6 0.2 0.39 10.4 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF140078 - 0.33 11.5 0.0 0.33 11.5 0.0 2.8 3 0 0 3 3 2 0 AAA domain Spc7 PF08317.11 ORF13541 - 0.046 12.6 6.7 0.084 11.7 6.7 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Uso1_p115_C PF04871.13 ORF13541 - 0.05 14.0 3.9 0.26 11.7 3.9 2.2 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF4558 PF15104.6 ORF13541 - 0.079 13.0 1.3 0.28 11.3 1.3 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4558) DUF4763 PF15960.5 ORF13541 - 0.092 12.0 8.1 0.06 12.6 2.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4763) NPV_P10 PF05531.12 ORF13541 - 0.093 13.2 1.8 0.36 11.3 0.6 2.6 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Nup88 PF10168.9 ORF13541 - 0.28 9.0 4.8 0.39 8.5 4.8 1.2 1 0 0 1 1 1 0 Nuclear pore component THOC7 PF05615.13 ORF13541 - 0.53 10.6 5.2 0.52 10.6 1.3 2.3 2 1 0 2 2 2 0 Tho complex subunit 7 betaPIX_CC PF16523.5 ORF13541 - 0.67 9.8 9.0 0.56 10.1 1.7 2.8 2 1 1 3 3 3 0 betaPIX coiled coil Tup_N PF08581.10 ORF13541 - 1.5 9.2 6.0 14 6.1 1.1 2.5 1 1 1 2 2 2 0 Tup N-terminal DUF1640 PF07798.11 ORF13541 - 1.6 8.7 6.8 6.5 6.8 6.8 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) TolA_bind_tri PF16331.5 ORF13541 - 2.1 8.5 10.2 5.9 7.1 0.1 3.6 3 0 0 3 3 3 0 TolA binding protein trimerisation DUF3552 PF12072.8 ORF112930 - 0.0019 17.7 9.8 0.0019 17.7 9.8 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF3552) HemX PF04375.14 ORF112930 - 0.013 14.8 22.6 0.054 12.8 7.0 2.3 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF5082 PF16888.5 ORF112930 - 0.047 14.0 27.0 0.83 9.9 2.2 4.1 3 1 0 3 3 3 0 Domain of unknown function (DUF5082) SspH PF08141.12 ORF112930 - 0.067 13.3 5.3 0.43 10.8 0.1 3.5 3 0 0 3 3 3 0 Small acid-soluble spore protein H family FAM76 PF16046.5 ORF112930 - 0.26 10.6 27.2 2.6 7.3 10.3 2.5 1 1 1 2 2 2 0 FAM76 protein Golgin_A5 PF09787.9 ORF112930 - 0.28 10.6 26.2 0.46 9.9 26.2 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF966 PF06136.13 ORF112930 - 0.3 10.8 12.6 0.36 10.5 12.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Spc7 PF08317.11 ORF112930 - 0.45 9.3 32.5 1.5 7.7 13.0 2.3 1 1 1 2 2 2 0 Spc7 kinetochore protein Atg14 PF10186.9 ORF112930 - 0.64 9.1 33.6 0.02 14.0 18.4 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 TRAF_BIRC3_bd PF16673.5 ORF112930 - 0.85 9.5 13.3 0.54 10.1 2.5 2.9 1 1 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF4200 PF13863.6 ORF112930 - 2 8.8 29.7 7.1 7.1 7.7 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) HrpB7 PF09486.10 ORF112930 - 2.1 8.7 18.5 3.6 7.9 5.1 3.1 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) DUF16 PF01519.16 ORF112930 - 2.1 8.9 29.1 0.28 11.7 10.4 4.0 1 1 2 3 3 3 0 Protein of unknown function DUF16 kleA_kleC PF17383.2 ORF112930 - 2.2 8.7 6.9 1.5 9.2 2.3 2.7 1 1 2 3 3 3 0 Uncharacterized KorC regulated protein A DUF3450 PF11932.8 ORF112930 - 3.6 6.8 23.2 9 5.5 9.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF2968 PF11180.8 ORF112930 - 5.1 6.7 19.9 0.5 10.0 11.2 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF2968) TMF_DNA_bd PF12329.8 ORF112930 - 5.7 7.0 39.9 0.32 11.0 12.1 4.1 1 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding UPF0242 PF06785.11 ORF112930 - 6.7 6.8 35.2 0.52 10.4 4.9 2.9 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus HIP1_clath_bdg PF16515.5 ORF112930 - 7.8 7.2 25.4 0.75 10.4 15.2 2.7 1 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 MCC-bdg_PDZ PF10506.9 ORF112930 - 8.3 6.5 11.2 13 5.9 3.4 2.9 1 1 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome APG6_N PF17675.1 ORF112930 - 9.6 6.7 31.1 2.8 8.5 5.8 2.4 1 1 1 2 2 2 0 Apg6 coiled-coil region TolA_bind_tri PF16331.5 ORF112930 - 9.8 6.3 22.5 7.3 6.7 4.9 3.4 2 1 2 4 4 3 0 TolA binding protein trimerisation ATP1G1_PLM_MAT8 PF02038.16 ORF107592 - 0.21 11.1 1.1 0.5 9.8 1.1 1.6 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family UDPGT PF00201.18 ORF99767 - 1.8e-11 43.6 0.0 2.9e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF99767 - 3.6e-06 27.1 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain AA_permease_2 PF13520.6 ORF90803 - 7.5e-60 202.9 44.3 9.2e-60 202.6 44.3 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF90803 - 2e-33 115.7 41.6 4.9e-33 114.5 41.4 1.6 1 1 0 1 1 1 1 Amino acid permease Melittin PF01372.17 ORF90803 - 0.001 18.9 0.1 0.0048 16.8 0.1 2.3 1 0 0 1 1 1 1 Melittin UDPGT PF00201.18 ORF88240 - 1.8e-11 43.6 0.0 2.9e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF88240 - 3.6e-06 27.1 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain SET PF00856.28 ORF87562 - 3.7e-07 30.7 0.0 8e-07 29.6 0.0 1.7 1 0 0 1 1 1 1 SET domain DUF695 PF05117.12 ORF87562 - 0.013 15.7 0.0 0.029 14.5 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF695) Vps39_2 PF10367.9 ORF78771 - 3.9e-20 72.3 0.4 1.3e-19 70.7 0.3 2.0 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 Clathrin PF00637.20 ORF78771 - 0.019 14.8 0.0 0.045 13.6 0.0 1.6 1 1 0 1 1 1 0 Region in Clathrin and VPS Aa_trans PF01490.18 ORF78550 - 1.1e-62 212.0 33.1 1.4e-62 211.7 33.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Jagunal PF07086.12 ORF78550 - 0.58 10.2 7.6 0.057 13.5 2.0 2.2 2 1 1 3 3 3 0 Jagunal, ER re-organisation during oogenesis DUF2645 PF10840.8 ORF78550 - 0.95 10.1 16.2 0.16 12.6 4.1 3.7 3 1 0 3 3 3 0 Protein of unknown function (DUF2645) Tubulin PF00091.25 ORF77748 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF77748 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF77748 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF77748 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF77748 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Acyl_transf_3 PF01757.22 ORF77706 - 4.7e-13 48.9 31.4 5.9e-13 48.6 31.4 1.1 1 0 0 1 1 1 1 Acyltransferase family UDPGT PF00201.18 ORF74210 - 1.8e-11 43.6 0.0 2.9e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF74210 - 3.6e-06 27.1 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain TPR_12 PF13424.6 ORF72539 - 1.1e-34 118.6 17.7 4.6e-13 49.2 0.6 5.1 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF72539 - 2.1e-21 74.2 20.5 3.8e-05 23.5 0.6 7.2 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF72539 - 5e-18 64.1 25.6 7.4e-06 25.6 0.9 6.9 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_10 PF13374.6 ORF72539 - 1.2e-13 50.4 6.2 0.083 12.8 0.0 6.7 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF72539 - 2.3e-12 47.0 4.8 5.4e-06 26.0 0.1 2.3 1 1 1 2 2 2 2 MalT-like TPR region TPR_8 PF13181.6 ORF72539 - 8.8e-12 44.3 29.5 0.0045 17.1 0.6 7.3 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF72539 - 1.8e-11 44.4 12.4 0.00035 21.0 0.4 5.2 2 2 3 5 5 5 4 Tetratricopeptide repeat TPR_16 PF13432.6 ORF72539 - 1e-08 35.6 1.9 0.053 14.2 0.0 4.9 4 2 1 5 5 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF72539 - 1.9e-08 34.4 2.0 5.2 8.2 0.0 6.5 6 1 0 6 6 6 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF72539 - 3.1e-08 33.7 20.1 0.058 13.6 0.6 6.2 2 2 4 6 6 6 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_20 PF14561.6 ORF72539 - 1.5e-07 31.6 7.1 1 9.8 0.2 5.6 2 1 3 5 5 5 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF72539 - 9.9e-06 25.1 17.3 0.46 10.2 0.5 6.8 6 2 1 7 7 7 3 TPR repeat TPR_7 PF13176.6 ORF72539 - 0.00011 22.0 13.2 0.023 14.7 0.8 5.8 7 0 0 7 7 5 2 Tetratricopeptide repeat PPR PF01535.20 ORF72539 - 0.00035 20.6 7.2 19 5.8 0.0 6.2 7 0 0 7 7 6 0 PPR repeat RPN7 PF10602.9 ORF72539 - 0.00056 19.7 20.3 0.012 15.3 7.5 4.9 1 1 4 6 6 6 2 26S proteasome subunit RPN7 DUF357 PF04010.13 ORF72539 - 0.00063 19.8 3.1 1.5 9.0 0.2 4.1 3 0 0 3 3 3 1 Protein of unknown function (DUF357) TPR_17 PF13431.6 ORF72539 - 0.00074 19.7 13.9 13 6.5 0.0 7.1 8 1 1 9 9 8 0 Tetratricopeptide repeat TPR_18 PF13512.6 ORF72539 - 0.003 17.7 0.4 0.0098 16.0 0.4 1.9 1 0 0 1 1 1 1 Tetratricopeptide repeat YfiO PF13525.6 ORF72539 - 0.03 14.0 6.7 0.067 12.9 2.6 2.7 2 1 1 3 3 3 0 Outer membrane lipoprotein Pep3_Vps18 PF05131.14 ORF72539 - 0.032 14.0 5.9 26 4.6 0.1 4.6 4 0 0 4 4 4 0 Pep3/Vps18/deep orange family TPR_6 PF13174.6 ORF72539 - 0.046 14.4 13.0 67 4.4 0.1 6.4 6 0 0 6 6 6 0 Tetratricopeptide repeat DUF2225 PF09986.9 ORF72539 - 0.13 12.0 18.2 3.9 7.1 3.2 3.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) PBP1_TM PF14812.6 ORF72539 - 4.2 7.8 12.9 3.7 8.0 9.6 2.4 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal SSF PF00474.17 ORF69969 - 7.2e-22 77.8 3.2 7.2e-22 77.8 3.2 2.2 2 1 0 2 2 2 1 Sodium:solute symporter family Polysacc_synt_C PF14667.6 ORF69969 - 0.021 14.9 0.5 0.021 14.9 0.5 3.5 2 1 1 3 3 3 0 Polysaccharide biosynthesis C-terminal domain CcmD PF04995.14 ORF69969 - 0.023 14.8 0.1 0.11 12.6 0.1 2.3 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) UBA PF00627.31 ORF58156 - 2.4e-25 88.0 2.3 7.7e-13 48.1 0.2 2.5 2 0 0 2 2 2 2 UBA/TS-N domain ubiquitin PF00240.23 ORF58156 - 6.4e-20 70.7 1.3 1.1e-19 69.9 1.3 1.4 1 0 0 1 1 1 1 Ubiquitin family XPC-binding PF09280.11 ORF58156 - 7.2e-14 51.3 12.6 1.3e-13 50.5 12.6 1.4 1 0 0 1 1 1 1 XPC-binding domain Rad60-SLD PF11976.8 ORF58156 - 9.6e-10 38.2 4.9 1.5e-09 37.5 4.9 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 ORF58156 - 0.0016 18.5 0.3 0.004 17.2 0.3 1.7 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF58156 - 0.028 14.9 0.3 0.065 13.7 0.3 1.6 1 0 0 1 1 1 0 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF58156 - 0.042 13.9 0.7 0.1 12.7 0.3 1.8 1 1 1 2 2 2 0 Ubiquitin-like domain UN_NPL4 PF11543.8 ORF58156 - 0.052 14.0 0.1 0.21 12.1 0.1 1.9 2 1 0 2 2 2 0 Nuclear pore localisation protein NPL4 PUF PF00806.19 ORF49435 - 4.1e-10 38.8 4.5 7.4e-05 22.2 0.2 3.7 3 0 0 3 3 3 2 Pumilio-family RNA binding repeat DUF249 PF03158.13 ORF49435 - 0.004 16.9 0.7 0.0069 16.1 0.7 1.4 1 0 0 1 1 1 1 Multigene family 530 protein LAGLIDADG_WhiA PF14527.6 ORF49435 - 0.029 14.4 0.2 0.072 13.2 0.2 1.7 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain DUF5408 PF17402.2 ORF49435 - 0.055 13.3 0.0 0.16 11.9 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5408) Pox_A3L PF05288.11 ORF49435 - 0.1 12.6 0.1 0.37 10.8 0.1 1.9 1 0 0 1 1 1 0 Poxvirus A3L Protein DnaGprimase_HBD PF16730.5 ORF49435 - 0.85 9.7 5.1 1.5 8.9 0.1 2.8 3 0 0 3 3 3 0 DnaG-primase C-terminal, helicase-binding domain Tubulin PF00091.25 ORF49116 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF49116 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF49116 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF49116 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF49116 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like FixS PF03597.15 ORF39741 - 0.64 9.8 7.8 1.7 8.4 0.0 2.4 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type UDPGT PF00201.18 ORF38936 - 1.8e-11 43.6 0.0 2.9e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF38936 - 3.6e-06 27.1 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Tubulin PF00091.25 ORF36771 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF36771 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF36771 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF36771 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF36771 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like UBA PF00627.31 ORF33561 - 2.4e-25 88.0 2.3 7.7e-13 48.1 0.2 2.5 2 0 0 2 2 2 2 UBA/TS-N domain ubiquitin PF00240.23 ORF33561 - 6.4e-20 70.7 1.3 1.1e-19 69.9 1.3 1.4 1 0 0 1 1 1 1 Ubiquitin family XPC-binding PF09280.11 ORF33561 - 7.2e-14 51.3 12.6 1.3e-13 50.5 12.6 1.4 1 0 0 1 1 1 1 XPC-binding domain Rad60-SLD PF11976.8 ORF33561 - 9.6e-10 38.2 4.9 1.5e-09 37.5 4.9 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 ORF33561 - 0.0016 18.5 0.3 0.004 17.2 0.3 1.7 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF33561 - 0.028 14.9 0.3 0.065 13.7 0.3 1.6 1 0 0 1 1 1 0 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF33561 - 0.042 13.9 0.7 0.1 12.7 0.3 1.8 1 1 1 2 2 2 0 Ubiquitin-like domain UN_NPL4 PF11543.8 ORF33561 - 0.052 14.0 0.1 0.21 12.1 0.1 1.9 2 1 0 2 2 2 0 Nuclear pore localisation protein NPL4 FAD_binding_3 PF01494.19 ORF32148 - 1e-17 64.5 0.1 2.4e-17 63.2 0.1 1.6 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF32148 - 2.8e-06 26.8 0.0 4.5e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF32148 - 0.00049 19.3 0.9 0.057 12.5 0.6 2.7 3 0 0 3 3 3 1 FAD binding domain NAD_binding_8 PF13450.6 ORF32148 - 0.0051 17.0 0.1 0.036 14.3 0.3 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 ORF32148 - 0.03 13.0 0.5 0.066 11.9 0.5 1.5 1 0 0 1 1 1 0 HI0933-like protein Thi4 PF01946.17 ORF32148 - 0.03 13.6 0.1 0.063 12.5 0.1 1.4 1 0 0 1 1 1 0 Thi4 family SE PF08491.10 ORF32148 - 0.03 13.4 0.0 0.054 12.5 0.0 1.3 1 0 0 1 1 1 0 Squalene epoxidase Pyr_redox PF00070.27 ORF32148 - 0.089 13.4 0.0 6.2 7.5 0.1 2.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DAGK_acc PF00609.19 ORF27217 - 1.5e-14 54.6 0.0 5.7e-14 52.8 0.0 2.0 1 1 0 1 1 1 1 Diacylglycerol kinase accessory domain DAGK_cat PF00781.24 ORF27217 - 2.8e-09 36.6 0.0 6.8e-09 35.4 0.0 1.7 1 1 0 1 1 1 1 Diacylglycerol kinase catalytic domain Peptidase_C14 PF00656.22 ORF26540 - 8.8e-52 176.5 0.0 1.5e-51 175.8 0.0 1.3 1 1 0 1 1 1 1 Caspase domain Raptor_N PF14538.6 ORF26540 - 0.024 14.6 0.4 5.3 7.0 0.0 2.7 2 0 0 2 2 2 0 Raptor N-terminal CASPase like domain CTP_transf_like PF01467.26 ORF26335 - 4.5e-39 133.9 0.0 2.4e-21 76.4 0.0 2.5 3 0 0 3 3 3 2 Cytidylyltransferase-like DUF724 PF05266.14 ORF26335 - 0.078 12.8 3.7 0.15 11.8 1.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF724) RasGAP PF00616.19 ORF26335 - 0.08 12.6 0.4 0.11 12.2 0.4 1.3 1 0 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase SSF PF00474.17 ORF2557 - 2.3e-10 39.9 10.1 4.9e-10 38.8 10.1 1.6 1 1 0 1 1 1 1 Sodium:solute symporter family Neurensin PF14927.6 ORF2557 - 0.22 11.2 0.1 0.22 11.2 0.1 2.3 2 0 0 2 2 2 0 Neurensin JLPA PF16668.5 ORF24063 - 0.0027 16.8 2.3 0.0042 16.2 2.3 1.3 1 0 0 1 1 1 1 Adhesin from Campylobacter Metallophos PF00149.28 ORF17717 - 4.2e-15 56.8 1.4 6.3e-15 56.2 1.4 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF17717 - 0.0028 17.9 0.1 0.074 13.2 0.1 2.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PAN_2 PF08276.11 ORF17717 - 0.033 14.3 1.3 0.033 14.3 1.3 2.3 3 0 0 3 3 3 0 PAN-like domain RRM_1 PF00076.22 ORF14723 - 4.8e-16 58.3 3.1 1.9e-09 37.2 1.7 2.7 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PABP PF00658.18 ORF14723 - 7.5e-12 45.3 0.1 1.3e-11 44.5 0.1 1.4 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain NpwBP PF12622.7 ORF14723 - 3.3 8.5 18.5 18 6.2 2.3 3.9 2 1 1 3 3 3 0 mRNA biogenesis factor Tubulin PF00091.25 ORF144995 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF144995 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF144995 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF144995 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF144995 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like UDPGT PF00201.18 ORF142733 - 1.8e-11 43.6 0.0 2.9e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF142733 - 3.6e-06 27.1 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain UBA PF00627.31 ORF141597 - 2.4e-25 88.0 2.3 7.7e-13 48.1 0.2 2.5 2 0 0 2 2 2 2 UBA/TS-N domain ubiquitin PF00240.23 ORF141597 - 6.4e-20 70.7 1.3 1.1e-19 69.9 1.3 1.4 1 0 0 1 1 1 1 Ubiquitin family XPC-binding PF09280.11 ORF141597 - 7.2e-14 51.3 12.6 1.3e-13 50.5 12.6 1.4 1 0 0 1 1 1 1 XPC-binding domain Rad60-SLD PF11976.8 ORF141597 - 9.6e-10 38.2 4.9 1.5e-09 37.5 4.9 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 ORF141597 - 0.0016 18.5 0.3 0.004 17.2 0.3 1.7 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF141597 - 0.028 14.9 0.3 0.065 13.7 0.3 1.6 1 0 0 1 1 1 0 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF141597 - 0.042 13.9 0.7 0.1 12.7 0.3 1.8 1 1 1 2 2 2 0 Ubiquitin-like domain UN_NPL4 PF11543.8 ORF141597 - 0.052 14.0 0.1 0.21 12.1 0.1 1.9 2 1 0 2 2 2 0 Nuclear pore localisation protein NPL4 UDPGT PF00201.18 ORF139616 - 1.8e-11 43.6 0.0 2.9e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF139616 - 3.6e-06 27.1 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain MFS_2 PF13347.6 ORF128007 - 1.3e-100 337.0 37.4 1.4e-100 336.8 37.4 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Xan_ur_permease PF00860.20 ORF127092 - 2.3e-42 145.1 51.4 2.3e-42 145.1 51.4 1.8 1 1 1 2 2 2 2 Permease family FixS PF03597.15 ORF126765 - 0.64 9.8 7.8 1.7 8.4 0.0 2.4 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type Tubulin PF00091.25 ORF125931 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF125931 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF125931 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF125931 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF125931 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Tubulin PF00091.25 ORF125913 - 1.9e-66 224.1 0.0 3.4e-66 223.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF125913 - 7.4e-41 139.3 0.1 1.1e-40 138.7 0.1 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 ORF125913 - 0.0017 18.6 0.0 0.0042 17.4 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF125913 - 0.03 14.0 0.0 0.062 13.0 0.0 1.5 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF125913 - 0.11 11.6 0.0 0.24 10.6 0.0 1.5 2 0 0 2 2 2 0 Tubulin like UDPGT PF00201.18 ORF124347 - 1.8e-11 43.6 0.0 2.9e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF124347 - 3.6e-06 27.1 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Fumble PF03630.14 ORF121784 - 2.7e-56 191.2 3.4 2.1e-55 188.2 3.4 1.9 1 1 0 1 1 1 1 Fumble DUF3552 PF12072.8 ORF120927 - 0.0019 17.7 9.8 0.0019 17.7 9.8 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF3552) HemX PF04375.14 ORF120927 - 0.014 14.7 22.6 0.054 12.8 7.0 2.2 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF5082 PF16888.5 ORF120927 - 0.038 14.3 24.8 0.87 9.9 1.6 3.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) FAM76 PF16046.5 ORF120927 - 0.36 10.1 27.0 3.4 6.9 10.9 2.5 1 1 1 2 2 2 0 FAM76 protein Spc7 PF08317.11 ORF120927 - 0.59 9.0 33.5 2 7.2 13.1 2.6 1 1 1 3 3 3 0 Spc7 kinetochore protein TRAF_BIRC3_bd PF16673.5 ORF120927 - 0.94 9.3 13.4 0.55 10.1 2.5 2.8 1 1 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain TolA_bind_tri PF16331.5 ORF120927 - 1.2 9.2 19.2 7.3 6.8 4.9 3.2 1 1 2 3 3 3 0 TolA binding protein trimerisation DUF4200 PF13863.6 ORF120927 - 1.4 9.4 29.1 10 6.5 9.2 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Golgin_A5 PF09787.9 ORF120927 - 1.5 8.2 28.4 2.4 7.5 28.4 1.2 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF724 PF05266.14 ORF120927 - 2 8.2 20.5 1.5 8.6 15.6 2.7 2 1 2 4 4 3 0 Protein of unknown function (DUF724) HrpB7 PF09486.10 ORF120927 - 2.1 8.7 18.5 3.6 8.0 5.1 3.1 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) kleA_kleC PF17383.2 ORF120927 - 2.2 8.6 6.8 1.4 9.3 2.2 2.6 1 1 2 3 3 3 0 Uncharacterized KorC regulated protein A DUF16 PF01519.16 ORF120927 - 2.3 8.8 28.2 0.48 10.9 11.3 4.0 1 1 2 3 3 3 0 Protein of unknown function DUF16 DUF3450 PF11932.8 ORF120927 - 2.5 7.3 22.7 4.9 6.4 8.5 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Atg14 PF10186.9 ORF120927 - 2.6 7.1 34.2 0.093 11.8 19.2 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF966 PF06136.13 ORF120927 - 2.9 7.5 15.6 3.6 7.2 15.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF966) UPF0242 PF06785.11 ORF120927 - 4.7 7.3 34.7 1.4 9.0 16.6 2.9 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus MCC-bdg_PDZ PF10506.9 ORF120927 - 5.1 7.2 11.7 13 5.9 3.4 3.5 2 1 0 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome TMF_DNA_bd PF12329.8 ORF120927 - 5.4 7.1 39.7 0.27 11.2 11.9 4.1 1 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding DUF2968 PF11180.8 ORF120927 - 5.9 6.5 19.9 0.49 10.0 11.2 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF2968) EDR1 PF14381.6 ORF120927 - 7.6 6.2 7.5 1.5 8.5 3.7 1.8 2 1 0 2 2 2 0 Ethylene-responsive protein kinase Le-CTR1 HIP1_clath_bdg PF16515.5 ORF120927 - 8.6 7.1 25.5 0.76 10.4 15.3 2.6 1 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 UDPGT PF00201.18 ORF117923 - 1.8e-11 43.6 0.0 2.9e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF117923 - 3.6e-06 27.1 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Aa_trans PF01490.18 ORF116028 - 1.1e-62 212.1 33.3 1.3e-62 211.9 33.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF2645 PF10840.8 ORF116028 - 0.94 10.1 16.2 0.16 12.6 4.1 3.7 3 1 0 3 3 3 0 Protein of unknown function (DUF2645) Jagunal PF07086.12 ORF116028 - 0.98 9.5 8.4 0.057 13.5 2.0 2.2 2 1 1 3 3 3 0 Jagunal, ER re-organisation during oogenesis ubiquitin PF00240.23 ORF115771 - 2.2e-11 43.3 0.7 5.5e-11 42.1 0.1 1.8 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 ORF115771 - 4.3e-07 29.7 0.8 8.6e-07 28.7 0.1 1.8 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like UBA PF00627.31 ORF115771 - 7.1e-05 22.6 0.1 0.00019 21.3 0.1 1.8 1 0 0 1 1 1 1 UBA/TS-N domain GerD PF17898.1 ORF115771 - 0.021 14.8 9.1 0.045 13.7 8.7 1.8 1 1 0 1 1 1 0 Spore germination GerD central core domain PI3K_rbd PF00794.18 ORF115771 - 0.064 13.4 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain XPC-binding PF09280.11 ORF115771 - 0.072 12.8 11.0 0.18 11.6 9.3 2.6 2 1 0 2 2 2 0 XPC-binding domain DUF2407 PF10302.9 ORF115771 - 0.083 13.5 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain HMD PF03201.16 ORF115771 - 0.62 10.3 5.2 19 5.5 0.5 3.1 2 1 0 2 2 2 0 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase SPX PF03105.19 ORF115771 - 1.7 8.5 3.3 2.5 7.9 3.3 1.1 1 0 0 1 1 1 0 SPX domain DUF1296 PF06972.11 ORF115771 - 4.1 7.6 5.7 1.2 9.3 0.3 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1296) CTP_transf_like PF01467.26 ORF114608 - 4.4e-39 133.9 0.0 2.4e-21 76.4 0.0 2.5 3 0 0 3 3 3 2 Cytidylyltransferase-like DUF724 PF05266.14 ORF114608 - 0.05 13.4 3.9 0.096 12.5 1.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF724) Chitin_synth_2 PF03142.15 ORF102009 - 0.093 11.3 0.1 0.14 10.8 0.1 1.2 1 0 0 1 1 1 0 Chitin synthase FAD_binding_3 PF01494.19 ORF9029 - 4e-15 55.9 4.1 5.3e-14 52.2 4.1 2.4 1 1 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF9029 - 0.00096 18.3 0.0 0.018 14.1 0.0 2.0 1 1 0 1 1 1 1 Squalene epoxidase Trp_halogenase PF04820.14 ORF9029 - 0.0013 17.7 0.0 0.026 13.4 0.0 2.3 2 0 0 2 2 2 1 Tryptophan halogenase Pyr_redox_2 PF07992.14 ORF9029 - 0.0054 16.0 0.1 0.01 15.1 0.0 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF9029 - 0.0094 16.2 0.0 0.024 14.9 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain IlvN PF07991.12 ORF9029 - 0.034 13.7 0.0 0.085 12.4 0.0 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_9 PF13454.6 ORF9029 - 0.036 14.0 0.0 0.22 11.5 0.0 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding EF-hand_1 PF00036.32 ORF80154 - 4.9e-25 85.2 22.2 9.2e-08 31.1 0.0 6.7 7 0 0 7 7 7 5 EF hand EF-hand_6 PF13405.6 ORF80154 - 8.6e-21 72.1 20.2 1.2e-07 31.0 0.0 6.8 7 0 0 7 7 7 5 EF-hand domain EF-hand_7 PF13499.6 ORF80154 - 1.4e-20 73.5 19.4 9.1e-11 42.1 0.2 5.1 3 2 3 6 6 6 5 EF-hand domain pair EF-hand_8 PF13833.6 ORF80154 - 1.1e-17 63.6 17.7 1.4e-09 37.7 0.1 7.2 6 1 1 7 7 7 6 EF-hand domain pair EF-hand_5 PF13202.6 ORF80154 - 1e-14 53.2 14.9 0.00014 21.2 1.2 4.9 4 0 0 4 4 4 3 EF hand SPARC_Ca_bdg PF10591.9 ORF80154 - 6.1e-05 23.3 6.7 0.1 12.9 0.9 3.5 2 1 1 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF80154 - 0.00034 21.4 6.0 0.57 11.1 0.2 5.1 3 2 3 6 6 6 1 EF-hand domain EnY2 PF10163.9 ORF80154 - 0.00057 20.2 0.1 0.0055 17.0 0.0 2.5 2 0 0 2 2 2 1 Transcription factor e(y)2 DUF5580 PF17743.1 ORF80154 - 0.0039 15.8 1.6 0.018 13.6 0.3 2.0 2 0 0 2 2 2 1 Family of unknown function (DUF5580) Caleosin PF05042.13 ORF80154 - 0.011 15.7 0.4 0.15 12.0 0.1 3.1 2 1 0 2 2 2 0 Caleosin related protein DUF1002 PF06207.11 ORF80154 - 0.089 12.3 0.7 0.38 10.2 0.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1002) HEPN PF05168.14 ORF80154 - 0.12 12.5 0.0 0.37 10.9 0.0 1.8 1 0 0 1 1 1 0 HEPN domain DAG_kinase_N PF14513.6 ORF80154 - 0.18 12.0 8.9 0.94 9.7 3.9 3.1 2 1 0 2 2 2 0 Diacylglycerol kinase N-terminus L31 PF09784.9 ORF80154 - 1.9 9.0 9.3 10 6.6 1.7 3.0 2 1 1 3 3 3 0 Mitochondrial ribosomal protein L31 EF-hand_4 PF12763.7 ORF80154 - 3.6 7.6 12.0 6.4 6.8 0.3 4.4 2 1 3 5 5 5 0 Cytoskeletal-regulatory complex EF hand zf-CCCH_2 PF14608.6 ORF7638 - 0.91 10.1 12.4 3.8 8.1 0.4 4.1 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger Cyclin_N PF00134.23 ORF68233 - 5.9e-32 110.1 3.8 5.5e-29 100.5 0.4 2.7 2 0 0 2 2 2 2 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF68233 - 2.3e-17 63.2 3.0 3.6e-17 62.5 1.8 2.0 2 0 0 2 2 2 1 Cyclin, C-terminal domain TMEM43 PF07787.12 ORF67638 - 5.1e-33 114.5 0.0 3.7e-32 111.7 0.0 2.0 1 1 0 1 1 1 1 Transmembrane protein 43 DUF2107 PF09880.9 ORF67638 - 0.019 15.0 0.3 0.035 14.2 0.3 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2107) MFS_1 PF07690.16 ORF65643 - 1.2e-31 109.9 36.4 2.7e-26 92.4 23.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF65643 - 3.5e-06 25.7 2.2 5.1e-06 25.2 2.2 1.3 1 0 0 1 1 1 1 Transmembrane secretion effector Sugar_tr PF00083.24 ORF65643 - 9.8e-05 21.4 35.0 0.0099 14.8 16.3 3.8 1 1 2 3 3 3 3 Sugar (and other) transporter OATP PF03137.20 ORF65643 - 0.00015 20.3 4.6 0.00015 20.3 4.6 4.7 2 2 1 3 3 3 1 Organic Anion Transporter Polypeptide (OATP) family DUF2615 PF11027.8 ORF65643 - 0.052 13.7 0.0 4.6 7.4 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2615) FMN_dh PF01070.18 ORF60504 - 2.6e-120 401.6 0.0 3.2e-120 401.3 0.0 1.1 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Glu_synthase PF01645.17 ORF60504 - 2.1e-06 27.1 0.3 3.4e-06 26.5 0.3 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase IMPDH PF00478.25 ORF60504 - 8.8e-06 24.9 2.4 3.7e-05 22.9 1.3 2.4 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 ORF60504 - 6.9e-05 22.2 1.2 0.047 12.9 0.1 2.2 1 1 1 2 2 2 2 Dihydroorotate dehydrogenase NMO PF03060.15 ORF60504 - 0.00042 19.8 0.9 0.00093 18.7 0.9 1.6 1 0 0 1 1 1 1 Nitronate monooxygenase ThiG PF05690.14 ORF60504 - 0.00064 19.1 1.4 0.037 13.3 0.1 2.4 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 ORF60504 - 0.0039 16.7 0.1 0.054 13.0 0.0 2.2 1 1 1 2 2 2 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 ORF60504 - 0.0066 15.9 0.0 0.19 11.1 0.0 2.2 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator Dus PF01207.17 ORF60504 - 0.01 15.0 0.1 0.8 8.7 0.1 2.2 1 1 1 2 2 2 0 Dihydrouridine synthase (Dus) TMP-TENI PF02581.17 ORF60504 - 0.049 13.0 0.4 0.21 10.9 0.1 2.1 2 0 0 2 2 2 0 Thiamine monophosphate synthase AP_endonuc_2 PF01261.24 ORF5612 - 3.3e-05 23.4 0.1 0.0027 17.2 0.0 2.6 2 1 1 3 3 3 2 Xylose isomerase-like TIM barrel SAP30_Sin3_bdg PF13867.6 ORF5612 - 0.12 12.7 0.7 0.39 11.1 0.1 2.2 3 0 0 3 3 3 0 Sin3 binding region of histone deacetylase complex subunit SAP30 Dala_Dala_lig_N PF01820.21 ORF40358 - 0.0036 17.8 0.2 0.014 15.8 0.0 2.1 2 0 0 2 2 2 1 D-ala D-ala ligase N-terminus PH PF00169.29 ORF3572 - 0.00023 21.6 3.0 0.00026 21.5 0.3 2.4 2 0 0 2 2 2 1 PH domain PH_16 PF17838.1 ORF3572 - 0.031 14.1 0.2 0.031 14.1 0.2 2.7 3 0 0 3 3 3 0 PH domain Sulfotransfer_1 PF00685.27 ORF33906 - 2.3e-15 56.8 2.4 1e-14 54.7 2.6 1.8 2 0 0 2 2 2 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF33906 - 1.2e-07 32.4 0.1 5.9e-07 30.1 0.1 2.0 1 1 1 2 2 2 1 Sulfotransferase family Sulfotransfer_2 PF03567.14 ORF33906 - 0.011 15.6 0.9 0.033 14.1 0.9 1.8 1 1 0 1 1 1 0 Sulfotransferase family FlaG PF03646.15 ORF267 - 0.64 10.2 7.4 4.1 7.6 7.4 2.4 1 1 0 1 1 1 0 FlaG protein Bac_DnaA PF00308.18 ORF25806 - 2.4e-99 331.6 0.2 3.7e-99 331.0 0.2 1.3 1 0 0 1 1 1 1 Bacterial dnaA protein Bac_DnaA_C PF08299.11 ORF25806 - 4.2e-33 113.2 0.3 1.2e-32 111.7 0.1 1.9 2 0 0 2 2 2 1 Bacterial dnaA protein helix-turn-helix DnaA_N PF11638.8 ORF25806 - 4.4e-11 42.4 0.1 1.1e-10 41.1 0.1 1.7 1 0 0 1 1 1 1 DnaA N-terminal domain IstB_IS21 PF01695.17 ORF25806 - 1.1e-10 41.5 0.0 2.1e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 ORF25806 - 2.3e-06 28.1 0.0 1.4e-05 25.6 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Kinesin PF00225.23 ORF25806 - 0.00041 19.4 0.0 0.00096 18.2 0.0 1.6 1 1 0 1 1 1 1 Kinesin motor domain AAA_14 PF13173.6 ORF25806 - 0.00094 19.2 0.1 0.015 15.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF25806 - 0.0022 18.4 0.1 0.012 16.0 0.1 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF25806 - 0.011 16.0 3.2 1.8 8.8 1.4 3.2 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 ORF25806 - 0.016 15.2 0.0 0.037 14.0 0.0 1.7 1 0 0 1 1 1 0 NACHT domain AFG1_ATPase PF03969.16 ORF25806 - 0.023 13.6 0.2 0.058 12.3 0.2 1.7 1 1 0 1 1 1 0 AFG1-like ATPase ATPase_2 PF01637.18 ORF25806 - 0.037 13.9 0.1 0.12 12.3 0.1 1.9 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea BLOC1S3 PF15753.5 ORF25806 - 0.09 12.9 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 RNA_helicase PF00910.22 ORF25806 - 0.12 12.8 0.0 0.44 11.0 0.0 2.0 1 1 0 1 1 1 0 RNA helicase AAA_19 PF13245.6 ORF25806 - 0.15 12.4 0.1 0.58 10.5 0.1 2.1 1 1 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 ORF22726 - 2.9e-11 43.4 0.0 4e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain RsgA_GTPase PF03193.16 ORF22726 - 0.12 12.2 0.0 0.34 10.8 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase DAGK_acc PF00609.19 ORF20053 - 5.6e-18 65.8 0.0 9.9e-18 65.0 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain DAGK_cat PF00781.24 ORF20053 - 4.6e-17 61.8 0.0 1.7e-16 60.0 0.0 1.9 1 1 0 1 1 1 1 Diacylglycerol kinase catalytic domain Cupin_4 PF08007.12 ORF19955 - 3.6e-11 43.1 0.3 5.1e-11 42.6 0.3 1.3 1 0 0 1 1 1 1 Cupin superfamily protein DUF2423 PF10338.9 ORF18121 - 0.67 10.2 2.2 1.2 9.4 2.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2423) LRR_6 PF13516.6 ORF17408 - 8.3e-08 31.7 4.4 0.029 14.4 0.1 4.5 4 0 0 4 4 4 3 Leucine Rich repeat LRR_4 PF12799.7 ORF17408 - 0.0022 18.3 0.0 12 6.5 0.0 3.6 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF17408 - 0.0042 16.8 1.2 2 8.3 0.1 3.5 3 1 0 3 3 3 2 Leucine rich repeat GDC-P PF02347.16 ORF15947 - 9.9e-09 34.5 1.0 2.8e-07 29.7 0.2 2.1 1 1 1 2 2 2 2 Glycine cleavage system P-protein Beta_elim_lyase PF01212.21 ORF15947 - 7.8e-08 31.9 0.1 1.2e-07 31.4 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 ORF15947 - 0.0023 16.9 0.1 0.0033 16.4 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Pyridoxal_deC PF00282.19 ORF15947 - 0.074 11.7 0.0 6.6 5.3 0.0 2.1 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain TRP PF06011.12 ORF150603 - 0.15 10.8 31.4 1.2 7.8 0.1 2.6 2 1 0 2 2 2 0 Transient receptor potential (TRP) ion channel # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks28.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks28.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks28.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks28.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FYRC PF05965.14 NODE_60033_length_276_cov_1.082988_g52093_i0forward_frame_1 - 0.029 14.5 0.0 0.039 14.1 0.0 1.1 1 0 0 1 1 1 0 F/Y rich C-terminus HTH_30 PF13556.6 NODE_60031_length_276_cov_1.157676_g52091_i0reverse_frame_1 - 0.074 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Sugar_tr PF00083.24 NODE_60017_length_276_cov_1.406639_g52077_i0reverse_frame_1 - 0.0022 16.9 0.5 0.0027 16.6 0.5 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter Phage_holin_3_3 PF16083.5 NODE_60016_length_276_cov_1.439834_g52076_i0forward_frame_1 - 0.11 12.6 1.4 0.14 12.2 0.9 1.4 1 1 1 2 2 2 0 LydA holin phage, holin superfamily III SPASM PF13186.6 NODE_60005_length_276_cov_1.634855_g52065_i0forward_frame_1 - 1.7 9.2 6.0 13 6.4 6.0 2.1 1 1 0 1 1 1 0 Iron-sulfur cluster-binding domain Coatomer_b_Cpla PF14806.6 NODE_60004_length_276_cov_1.643154_g52064_i0reverse_frame_1 - 0.073 13.1 0.1 0.087 12.8 0.1 1.0 1 0 0 1 1 1 0 Coatomer beta subunit appendage platform Fer4_6 PF12837.7 NODE_60003_length_276_cov_1.651452_g52063_i0forward_frame_1 - 0.048 13.7 2.4 0.12 12.5 1.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain COX2-transmemb PF09125.10 NODE_60001_length_276_cov_1.697095_g52061_i0reverse_frame_1 - 0.23 11.2 1.0 0.42 10.4 1.0 1.4 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane CHZ PF09649.10 NODE_59995_length_276_cov_1.755187_g52055_i0reverse_frame_1 - 0.79 9.2 2.3 1.2 8.7 2.3 1.2 1 0 0 1 1 1 0 Histone chaperone domain CHZ CRCB PF02537.15 NODE_59995_length_276_cov_1.755187_g52055_i0forward_frame_1 - 0.098 13.0 0.4 0.13 12.6 0.4 1.2 1 0 0 1 1 1 0 CrcB-like protein, Camphor Resistance (CrcB) VEFS-Box PF09733.9 NODE_59991_length_276_cov_1.804979_g52051_i0forward_frame_1 - 0.0023 17.8 1.0 0.0025 17.6 1.0 1.0 1 0 0 1 1 1 1 VEFS-Box of polycomb protein POB3_N PF17292.2 NODE_59987_length_276_cov_1.896266_g52047_i0reverse_frame_1 - 0.021 15.3 0.3 1.7 9.2 0.0 2.1 2 0 0 2 2 2 0 POB3-like N-terminal PH domain zf-C2H2_9 PF16293.5 NODE_59987_length_276_cov_1.896266_g52047_i0reverse_frame_1 - 0.097 12.5 0.3 0.15 11.9 0.3 1.5 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) Rad33 PF08730.10 NODE_59984_length_276_cov_2.041494_g52044_i0reverse_frame_1 - 0.027 14.5 0.0 0.03 14.3 0.0 1.1 1 0 0 1 1 1 0 Rad33 APOC4 PF15119.6 NODE_59981_length_276_cov_2.116183_g52041_i0forward_frame_1 - 0.087 13.1 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Apolipoprotein C4 DGF-1_C PF11040.8 NODE_59979_length_276_cov_2.116183_g52039_i0forward_frame_1 - 0.16 12.0 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus DUF3040 PF11239.8 NODE_59972_length_276_cov_2.373444_g52032_i0reverse_frame_1 - 0.1 12.9 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) YmgB PF10798.8 NODE_59957_length_276_cov_2.970954_g52017_i0reverse_frame_1 - 7.8e-24 83.3 1.8 7.8e-24 83.3 1.8 1.4 2 0 0 2 2 2 1 Biofilm development protein YmgB/AriR Sde2_N_Ubi PF13019.6 NODE_59954_length_276_cov_3.165975_g52014_i0forward_frame_1 - 0.049 13.5 0.0 0.2 11.5 0.0 1.7 2 0 0 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain MutH PF02976.15 NODE_59947_length_276_cov_4.547718_g52007_i0reverse_frame_1 - 0.17 11.9 0.1 0.2 11.7 0.1 1.2 1 0 0 1 1 1 0 DNA mismatch repair enzyme MutH BTAD PF03704.17 NODE_59935_length_276_cov_55.655602_g51995_i0reverse_frame_1 - 0.023 15.1 0.2 0.026 15.0 0.2 1.1 1 0 0 1 1 1 0 Bacterial transcriptional activator domain zf-RING_2 PF13639.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 1.7e-13 50.7 5.6 2.9e-13 49.9 5.6 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 3.5e-10 39.6 4.7 5.8e-10 38.9 4.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 7.5e-08 32.0 3.2 1.6e-07 30.9 3.2 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 2.1e-07 31.1 6.9 2.1e-07 31.1 6.9 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 4.7e-07 29.6 3.2 8.8e-07 28.7 3.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 3.2e-05 23.9 2.7 6e-05 23.0 2.7 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 4.2e-05 23.4 3.7 4.2e-05 23.4 3.7 1.6 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.00012 21.9 2.1 0.00012 21.9 2.1 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING-like PF08746.11 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.0012 19.1 1.7 0.0029 17.9 1.7 1.7 1 0 0 1 1 1 1 RING-like domain Zn_ribbon_17 PF17120.5 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.0062 16.1 4.5 0.0068 16.0 3.7 1.6 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.0071 16.4 2.8 0.022 14.8 2.8 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.014 15.6 5.9 0.11 12.7 5.9 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain Prok-RING_4 PF14447.6 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.025 14.4 5.4 0.11 12.4 5.2 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 RINGv PF12906.7 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.042 14.0 0.7 0.042 14.0 0.7 3.1 2 1 1 3 3 3 0 RING-variant domain RHH_5 PF07878.11 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.075 12.9 0.2 0.12 12.2 0.2 1.3 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 zf-C3H2C3 PF17122.5 NODE_59934_length_276_cov_59.589212_g51994_i0reverse_frame_1 - 0.16 12.1 5.8 0.43 10.7 5.8 1.9 1 1 0 1 1 1 0 Zinc-finger DUF2124 PF09897.9 NODE_59934_length_276_cov_59.589212_g51994_i0forward_frame_1 - 0.035 14.0 0.0 0.042 13.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2124) Creb_binding PF09030.10 NODE_59934_length_276_cov_59.589212_g51994_i0forward_frame_1 - 0.12 13.1 0.6 1.3 9.8 0.1 2.0 1 1 1 2 2 2 0 Creb binding Lipid_DES PF08557.10 NODE_59925_length_276_cov_65.518672_g51985_i0forward_frame_1 - 2e-13 49.6 0.6 5.9e-07 28.9 0.3 2.3 2 0 0 2 2 2 2 Sphingolipid Delta4-desaturase (DES) DUF1365 PF07103.11 NODE_59921_length_276_cov_68.435685_g51981_i0reverse_frame_1 - 0.033 13.9 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1365) Plasmid_stab_B PF10784.9 NODE_59916_length_276_cov_73.360996_g51976_i0reverse_frame_1 - 0.021 14.6 0.1 0.029 14.2 0.1 1.3 1 0 0 1 1 1 0 Plasmid stability protein PH_2 PF08458.10 NODE_59914_length_276_cov_76.232365_g51974_i0reverse_frame_1 - 0.15 12.4 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Plant pleckstrin homology-like region Orthoreo_P10 PF07204.11 NODE_59912_length_276_cov_77.912863_g51972_i0reverse_frame_1 - 0.0063 16.4 0.0 0.0071 16.3 0.0 1.1 1 0 0 1 1 1 1 Orthoreovirus membrane fusion protein p10 DUF679 PF05078.12 NODE_59912_length_276_cov_77.912863_g51972_i0reverse_frame_1 - 0.061 13.3 0.1 0.072 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF679) FA_desaturase PF00487.24 NODE_59912_length_276_cov_77.912863_g51972_i0forward_frame_1 - 0.25 11.2 4.4 0.29 10.9 4.4 1.0 1 0 0 1 1 1 0 Fatty acid desaturase Ribosomal_S4 PF00163.19 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_1 - 0.21 12.5 2.9 0.37 11.7 2.9 1.4 1 1 0 1 1 1 0 Ribosomal protein S4/S9 N-terminal domain PolC_DP2 PF03833.13 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_1 - 7.9 4.2 13.8 8.3 4.1 13.8 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF3446 PF11928.8 NODE_59901_length_276_cov_123.991701_g51961_i0forward_frame_1 - 0.21 11.9 17.4 0.26 11.6 17.4 1.2 1 0 0 1 1 1 0 Early growth response N-terminal domain DUF5527 PF17665.1 NODE_59898_length_276_cov_127.966805_g51958_i0reverse_frame_1 - 0.048 13.2 0.2 0.056 13.0 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5527) OrfB_Zn_ribbon PF07282.11 NODE_59897_length_276_cov_134.614108_g51957_i0forward_frame_1 - 0.0049 16.8 0.3 0.0068 16.3 0.3 1.3 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Macoilin PF09726.9 NODE_59896_length_276_cov_135.713693_g51956_i0reverse_frame_1 - 5.6 5.4 12.4 5.5 5.4 12.4 1.1 1 0 0 1 1 1 0 Macoilin family Peptidase_C48 PF02902.19 NODE_59893_length_276_cov_174.759336_g51953_i0forward_frame_1 - 1.6e-05 24.8 0.1 1.8e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain DUF3896 PF13035.6 NODE_59893_length_276_cov_174.759336_g51953_i0forward_frame_1 - 0.06 13.5 0.8 8.8 6.6 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3896) DUF390 PF04094.14 NODE_59890_length_276_cov_198.410788_g51950_i0reverse_frame_1 - 0.0012 17.3 0.6 0.0013 17.2 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF390) Phage_antitermQ PF06530.12 NODE_59881_length_276_cov_7244.908714_g51941_i0forward_frame_1 - 0.21 11.5 0.0 0.28 11.1 0.0 1.2 1 0 0 1 1 1 0 Phage antitermination protein Q LRR_4 PF12799.7 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 2.3e-06 27.8 0.1 2.6e-05 24.5 0.1 2.1 2 0 0 2 2 2 1 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 8.4e-06 25.4 0.1 0.019 15.0 0.0 2.9 3 0 0 3 3 3 2 Leucine Rich repeat LRR_8 PF13855.6 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 2.1e-05 24.2 0.7 0.00085 19.0 0.7 2.5 1 1 0 1 1 1 1 Leucine rich repeat LRR_1 PF00560.33 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 0.00033 20.8 0.1 1.1 10.1 0.0 2.4 2 0 0 2 2 2 2 Leucine Rich Repeat LRR_9 PF14580.6 NODE_59874_length_277_cov_1.128099_g51934_i0forward_frame_3 - 0.038 13.5 0.0 0.063 12.8 0.0 1.3 1 1 0 1 1 1 0 Leucine-rich repeat CPSF73-100_C PF11718.8 NODE_59868_length_277_cov_1.380165_g51928_i0forward_frame_2 - 0.023 14.3 1.4 0.027 14.0 1.4 1.2 1 1 0 1 1 1 0 Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term Cauli_DNA-bind PF03310.13 NODE_59868_length_277_cov_1.380165_g51928_i0forward_frame_2 - 3.9 7.6 8.3 0.72 9.9 1.5 2.0 1 1 1 2 2 2 0 Caulimovirus DNA-binding protein ABC2_membrane PF01061.24 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 0.01 15.3 7.7 0.012 15.1 7.7 1.0 1 0 0 1 1 1 1 ABC-2 type transporter CrgA PF06781.12 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 0.28 11.2 3.7 0.38 10.8 3.7 1.2 1 0 0 1 1 1 0 Cell division protein CrgA DHHC PF01529.20 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 0.36 10.9 4.0 0.52 10.4 4.0 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Insulin_TMD PF17870.1 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 1.5 8.9 6.9 1.1 9.4 4.4 2.0 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Baculo_11_kDa PF06143.11 NODE_59865_length_277_cov_1.396694_g51925_i0forward_frame_3 - 9.8 5.8 7.3 3.8 7.2 5.0 1.5 1 1 0 1 1 1 0 Baculovirus 11 kDa family HrpB7 PF09486.10 NODE_59858_length_277_cov_1.640496_g51918_i0reverse_frame_3 - 0.064 13.7 1.8 0.082 13.3 1.8 1.2 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) MCR_alpha PF02249.17 NODE_59858_length_277_cov_1.640496_g51918_i0reverse_frame_3 - 0.07 13.6 0.8 0.086 13.3 0.8 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain DUF4602 PF15375.6 NODE_59858_length_277_cov_1.640496_g51918_i0reverse_frame_3 - 0.092 13.1 1.1 0.14 12.5 1.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4602) Phage_HK97_TLTM PF06120.11 NODE_59858_length_277_cov_1.640496_g51918_i0reverse_frame_3 - 0.12 11.5 1.4 0.14 11.3 1.4 1.1 1 0 0 1 1 1 0 Tail length tape measure protein DUF5634_N PF18672.1 NODE_59858_length_277_cov_1.640496_g51918_i0reverse_frame_2 - 0.15 11.8 0.4 0.21 11.4 0.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5634) DUF4786 PF16027.5 NODE_59858_length_277_cov_1.640496_g51918_i0reverse_frame_2 - 0.26 11.9 0.0 0.35 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4786) MFS_Mycoplasma PF07672.13 NODE_59856_length_277_cov_1.657025_g51916_i0reverse_frame_2 - 0.055 12.8 0.0 0.061 12.6 0.0 1.0 1 0 0 1 1 1 0 Mycoplasma MFS transporter Pkinase_Tyr PF07714.17 NODE_59856_length_277_cov_1.657025_g51916_i0forward_frame_3 - 0.046 13.0 0.1 0.052 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase GBP PF02263.19 NODE_59856_length_277_cov_1.657025_g51916_i0forward_frame_2 - 4e-10 39.4 0.0 4.4e-10 39.3 0.0 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain RcsF PF16358.5 NODE_59854_length_277_cov_1.702479_g51914_i0reverse_frame_2 - 0.045 13.8 1.2 0.056 13.5 1.2 1.2 1 0 0 1 1 1 0 RcsF lipoprotein Sec23_helical PF04815.15 NODE_59853_length_277_cov_1.710744_g51913_i0forward_frame_3 - 2.1e-14 53.2 0.0 2.5e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 Sec23/Sec24 helical domain Peptidase_U32 PF01136.19 NODE_59852_length_277_cov_1.714876_g51912_i0forward_frame_2 - 5e-44 150.2 0.0 5.4e-44 150.1 0.0 1.0 1 0 0 1 1 1 1 Peptidase family U32 Tachystatin_B PF11478.8 NODE_59852_length_277_cov_1.714876_g51912_i0forward_frame_2 - 0.0036 17.2 0.7 0.0056 16.6 0.7 1.3 1 0 0 1 1 1 1 Antimicrobial chitin binding protein tachystatin B DNA_pol_A_exo1 PF01612.20 NODE_59851_length_277_cov_1.723140_g51911_i0forward_frame_3 - 7.3e-22 77.9 0.0 7.6e-22 77.9 0.0 1.0 1 0 0 1 1 1 1 3'-5' exonuclease fn3_5 PF06280.12 NODE_59850_length_277_cov_1.723140_g51910_i0reverse_frame_2 - 0.014 16.0 0.0 0.015 15.9 0.0 1.2 1 0 0 1 1 1 0 Fn3-like domain ODV-E18 PF10717.9 NODE_59848_length_277_cov_1.760331_g51908_i0forward_frame_3 - 1.9 8.4 6.1 1.6 8.7 5.2 1.4 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 E1-E2_ATPase PF00122.20 NODE_59846_length_277_cov_1.793388_g51906_i0reverse_frame_2 - 0.08 12.5 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 E1-E2 ATPase YlaH PF14036.6 NODE_59846_length_277_cov_1.793388_g51906_i0forward_frame_2 - 0.069 13.5 2.1 0.09 13.1 2.1 1.2 1 0 0 1 1 1 0 YlaH-like protein Pigment_DH PF06324.11 NODE_59846_length_277_cov_1.793388_g51906_i0forward_frame_2 - 0.24 11.6 1.1 0.63 10.2 1.0 1.8 1 1 0 1 1 1 0 Pigment-dispersing hormone (PDH) DUF2457 PF10446.9 NODE_59844_length_277_cov_1.842975_g51904_i0forward_frame_2 - 0.27 10.3 1.5 0.27 10.4 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Wzy_C_2 PF11846.8 NODE_59838_length_277_cov_1.933884_g51898_i0forward_frame_2 - 0.063 13.2 0.0 0.069 13.1 0.0 1.1 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal CTNNBL PF08216.11 NODE_59838_length_277_cov_1.933884_g51898_i0forward_frame_2 - 0.12 12.5 0.9 0.25 11.6 0.9 1.4 1 0 0 1 1 1 0 Catenin-beta-like, Arm-motif containing nuclear Not3 PF04065.15 NODE_59836_length_277_cov_1.942149_g51896_i0forward_frame_3 - 0.059 12.8 0.1 0.064 12.7 0.1 1.0 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component DUF3350 PF11830.8 NODE_59836_length_277_cov_1.942149_g51896_i0forward_frame_3 - 0.37 11.1 3.3 5.5 7.4 1.5 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3350) Phage_Mu_Gam PF07352.12 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_3 - 0.0042 17.0 2.2 0.0042 17.0 2.2 1.5 2 0 0 2 2 2 1 Bacteriophage Mu Gam like protein YojJ PF10372.9 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_3 - 0.0073 16.4 0.4 0.013 15.6 0.4 1.5 1 0 0 1 1 1 1 Bacterial membrane-spanning protein N-terminus StbA PF06406.11 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_3 - 0.044 13.0 1.4 0.049 12.9 1.4 1.0 1 0 0 1 1 1 0 StbA protein DUF5094 PF17015.5 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_3 - 0.11 12.6 5.6 0.11 12.5 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) TMPIT PF07851.13 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_3 - 0.54 9.5 3.5 0.6 9.3 3.5 1.0 1 0 0 1 1 1 0 TMPIT-like protein CCDC92 PF14916.6 NODE_59835_length_277_cov_1.962810_g51895_i0reverse_frame_2 - 0.00056 19.6 2.1 0.00079 19.1 2.1 1.2 1 0 0 1 1 1 1 Coiled-coil domain of unknown function BPS PF08947.10 NODE_59833_length_277_cov_1.975207_g51893_i0forward_frame_2 - 0.073 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 BPS (Between PH and SH2) PRP8_domainIV PF12134.8 NODE_59829_length_277_cov_1.987603_g51889_i0reverse_frame_2 - 0.14 11.8 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 PRP8 domain IV core IlvGEDA_leader PF08046.11 NODE_59828_length_277_cov_2.000000_g51888_i0reverse_frame_2 - 2.6e-16 58.7 7.5 3.3e-16 58.4 7.5 1.1 1 0 0 1 1 1 1 IlvGEDA operon leader peptide UPF0258 PF06789.12 NODE_59828_length_277_cov_2.000000_g51888_i0reverse_frame_2 - 0.013 15.6 0.1 0.018 15.2 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0258) FANCI_S3 PF14677.6 NODE_59826_length_277_cov_2.049587_g51886_i0reverse_frame_3 - 0.04 13.6 0.1 0.043 13.5 0.1 1.0 1 0 0 1 1 1 0 FANCI solenoid 3 Response_reg PF00072.24 NODE_59824_length_277_cov_2.099174_g51884_i0reverse_frame_2 - 0.24 11.6 0.0 0.42 10.8 0.0 1.4 1 1 0 1 1 1 0 Response regulator receiver domain zf-CCHH PF10283.9 NODE_59824_length_277_cov_2.099174_g51884_i0forward_frame_3 - 0.078 13.0 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 PBZ domain HlyIII PF03006.20 NODE_59820_length_277_cov_2.190083_g51880_i0reverse_frame_2 - 6.9e-21 75.0 3.1 7.5e-21 74.9 3.1 1.0 1 0 0 1 1 1 1 Haemolysin-III related Tsc35 PF15079.6 NODE_59818_length_277_cov_2.272727_g51878_i0forward_frame_3 - 1.1 8.8 2.9 1.7 8.2 2.9 1.2 1 0 0 1 1 1 0 Testis-specific protein 35 TgMIC1 PF11476.8 NODE_59818_length_277_cov_2.272727_g51878_i0forward_frame_2 - 0.19 11.5 0.1 0.23 11.2 0.1 1.2 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 Sgf11_N PF18519.1 NODE_59818_length_277_cov_2.272727_g51878_i0forward_frame_2 - 0.22 11.1 1.7 0.43 10.2 1.7 1.5 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain ELP6 PF09807.9 NODE_59817_length_277_cov_2.293388_g51877_i0reverse_frame_2 - 0.099 12.0 0.1 0.17 11.3 0.1 1.4 1 1 0 1 1 1 0 Elongation complex protein 6 LCE PF14672.6 NODE_59817_length_277_cov_2.293388_g51877_i0reverse_frame_2 - 4.7 7.9 7.8 3.9 8.1 0.6 2.1 2 0 0 2 2 2 0 Late cornified envelope DUF2990 PF11693.8 NODE_59812_length_277_cov_2.495868_g51872_i0forward_frame_3 - 0.028 14.6 0.2 0.042 14.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) DUF3410 PF11890.8 NODE_59812_length_277_cov_2.495868_g51872_i0forward_frame_3 - 0.09 12.6 0.3 0.22 11.3 0.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3410) V-ATPase_H_N PF03224.14 NODE_59811_length_277_cov_2.524793_g51871_i0forward_frame_3 - 0.053 12.8 0.0 0.061 12.6 0.0 1.0 1 0 0 1 1 1 0 V-ATPase subunit H Clathrin-link PF09268.10 NODE_59810_length_277_cov_2.553719_g51870_i0reverse_frame_2 - 0.15 11.4 0.0 0.27 10.6 0.0 1.4 1 0 0 1 1 1 0 Clathrin, heavy-chain linker BPD_transp_1 PF00528.22 NODE_59809_length_277_cov_2.586777_g51869_i0forward_frame_2 - 5.2e-09 36.1 0.5 6.7e-09 35.7 0.5 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component CBP_BcsF PF11120.8 NODE_59809_length_277_cov_2.586777_g51869_i0forward_frame_2 - 0.2 11.8 1.5 0.34 11.1 1.5 1.4 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF DUF3464 PF11947.8 NODE_59809_length_277_cov_2.586777_g51869_i0forward_frame_2 - 4.8 6.9 4.8 4.5 7.0 0.2 2.0 1 1 1 2 2 2 0 Photosynthesis affected mutant 68 Vac14_Fig4_bd PF11916.8 NODE_59807_length_277_cov_2.603306_g51867_i0reverse_frame_3 - 0.0067 16.1 0.1 0.012 15.3 0.1 1.3 1 1 0 1 1 1 1 Vacuolar protein 14 C-terminal Fig4p binding Pkinase PF00069.25 NODE_59806_length_277_cov_2.723140_g51866_i0forward_frame_3 - 5.8e-20 71.7 0.0 6.1e-20 71.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_59806_length_277_cov_2.723140_g51866_i0forward_frame_3 - 2.9e-10 39.9 0.0 3e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Herpes_LMP1 PF05297.11 NODE_59804_length_277_cov_2.785124_g51864_i0reverse_frame_2 - 0.35 10.0 4.9 0.34 10.1 4.9 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) SnAC PF14619.6 NODE_59802_length_277_cov_2.966942_g51862_i0reverse_frame_3 - 0.026 15.1 0.1 0.035 14.7 0.1 1.2 1 0 0 1 1 1 0 Snf2-ATP coupling, chromatin remodelling complex Bap31_Bap29_C PF18035.1 NODE_59802_length_277_cov_2.966942_g51862_i0reverse_frame_2 - 0.054 13.5 0.0 0.09 12.8 0.0 1.4 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain FAA_hydro_N_2 PF18288.1 NODE_59802_length_277_cov_2.966942_g51862_i0reverse_frame_2 - 0.11 13.0 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 Fumarylacetoacetase N-terminal domain 2 CBM_19 PF03427.13 NODE_59802_length_277_cov_2.966942_g51862_i0forward_frame_2 - 0.036 14.0 2.2 0.068 13.2 1.9 1.7 1 1 0 1 1 1 0 Carbohydrate binding domain (family 19) DUF3721 PF12518.8 NODE_59801_length_277_cov_2.987603_g51861_i0forward_frame_3 - 0.091 12.6 0.3 0.13 12.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF3552 PF12072.8 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.00052 19.5 0.2 0.00065 19.2 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) Vpu PF00558.19 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.00055 19.6 0.1 0.00069 19.3 0.1 1.1 1 0 0 1 1 1 1 Vpu protein FAM163 PF15069.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.001 19.5 0.0 0.0011 19.4 0.0 1.1 1 0 0 1 1 1 1 FAM163 family EphA2_TM PF14575.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.007 17.2 0.1 0.0084 17.0 0.1 1.1 1 0 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain Amnionless PF14828.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.014 14.3 0.1 0.014 14.2 0.1 1.0 1 0 0 1 1 1 0 Amnionless ATP-synt_E PF05680.12 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.015 15.6 0.0 0.018 15.4 0.0 1.1 1 0 0 1 1 1 0 ATP synthase E chain DUF4834 PF16118.5 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.017 16.1 0.3 0.021 15.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) WBP-1 PF11669.8 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.018 15.7 0.2 0.019 15.6 0.2 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 Peptidase_M56 PF05569.11 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.021 14.0 0.0 0.022 13.9 0.0 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 Shisa PF13908.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.024 14.9 0.1 0.029 14.6 0.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Tmemb_9 PF05434.11 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.025 14.5 0.0 0.029 14.3 0.0 1.1 1 0 0 1 1 1 0 TMEM9 DUF2852 PF11014.8 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.029 14.5 0.0 0.034 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) Sigma_reg_N PF13800.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.041 14.2 0.1 0.055 13.7 0.1 1.3 1 0 0 1 1 1 0 Sigma factor regulator N-terminal OSTbeta PF15048.6 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.066 13.4 0.0 0.076 13.2 0.0 1.1 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein Chordopox_G3 PF06129.12 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.077 13.7 0.2 0.1 13.3 0.2 1.2 1 0 0 1 1 1 0 Chordopoxvirus G3 protein Ctr PF04145.15 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_3 - 0.26 11.9 3.4 0.53 10.9 3.4 1.4 1 1 0 1 1 1 0 Ctr copper transporter family DUF3439 PF11921.8 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_2 - 0.025 14.5 8.5 0.031 14.2 8.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Metallothio_11 PF02066.15 NODE_59800_length_277_cov_3.429752_g51860_i0reverse_frame_2 - 0.064 13.4 8.2 0.1 12.8 8.2 1.5 1 0 0 1 1 1 0 Metallothionein family 11 RCC1_2 PF13540.6 NODE_59799_length_277_cov_3.648760_g51859_i0forward_frame_3 - 0.00087 19.0 3.3 0.081 12.8 0.1 3.0 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 NODE_59799_length_277_cov_3.648760_g51859_i0forward_frame_3 - 0.14 12.6 0.0 5.2 7.6 0.0 2.0 2 0 0 2 2 2 0 Spectrin repeat DUF3095 PF11294.8 NODE_59797_length_277_cov_4.045455_g51857_i0reverse_frame_3 - 0.023 13.8 0.0 0.023 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3095) Orbi_VP7 PF00897.17 NODE_59797_length_277_cov_4.045455_g51857_i0reverse_frame_2 - 0.11 11.5 0.1 0.13 11.2 0.1 1.1 1 0 0 1 1 1 0 Orbivirus inner capsid protein VP7 Peptidase_C50 PF03568.17 NODE_59797_length_277_cov_4.045455_g51857_i0reverse_frame_2 - 3.2 6.8 4.6 3.8 6.5 4.6 1.0 1 0 0 1 1 1 0 Peptidase family C50 Jas PF16135.5 NODE_59797_length_277_cov_4.045455_g51857_i0forward_frame_3 - 0.16 12.1 0.1 0.24 11.6 0.1 1.3 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling REPA_OB_2 PF16900.5 NODE_59795_length_277_cov_5.760331_g51855_i0reverse_frame_2 - 0.013 15.4 0.5 0.056 13.4 0.5 1.8 1 1 0 1 1 1 0 Replication protein A OB domain Romo1 PF10247.9 NODE_59795_length_277_cov_5.760331_g51855_i0forward_frame_2 - 0.1 13.0 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Reactive mitochondrial oxygen species modulator 1 Mito_carr PF00153.27 NODE_59795_length_277_cov_5.760331_g51855_i0forward_frame_2 - 0.13 12.2 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial carrier protein Corona_M PF01635.18 NODE_59794_length_277_cov_6.024793_g51854_i0reverse_frame_2 - 0.055 12.8 0.5 0.066 12.5 0.5 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein Cnd1_N PF12922.7 NODE_59790_length_277_cov_12.723140_g51850_i0reverse_frame_3 - 0.086 12.7 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term Herpes_PAP PF03325.13 NODE_59788_length_277_cov_42.078512_g51848_i0reverse_frame_2 - 0.075 12.6 0.4 0.083 12.5 0.4 1.2 1 0 0 1 1 1 0 Herpesvirus polymerase accessory protein ArAE_2_N PF10337.9 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.0087 15.1 0.4 0.0087 15.1 0.4 1.3 1 1 0 1 1 1 1 Putative ER transporter, 6TM, N-terminal DUF3450 PF11932.8 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.014 14.7 7.2 0.016 14.5 7.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) UPF0242 PF06785.11 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.018 15.2 10.0 0.021 14.9 10.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus GAS PF13851.6 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.036 13.4 18.6 0.042 13.2 18.6 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding SlyX PF04102.12 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.089 13.4 1.8 1.3 9.6 0.3 2.2 1 1 1 2 2 2 0 SlyX DUF641 PF04859.12 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.14 12.5 9.2 0.17 12.2 9.2 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) TMF_DNA_bd PF12329.8 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 0.64 10.1 18.2 1.5 8.8 12.6 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Atg14 PF10186.9 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 1.2 8.1 12.6 1.4 7.9 12.6 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 GrpE PF01025.19 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 2.2 7.9 14.9 3.8 7.2 14.9 1.6 1 1 0 1 1 1 0 GrpE DUF4407 PF14362.6 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 4 6.7 6.7 4.6 6.5 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 7.3 6.4 11.2 13 5.6 7.2 2.3 1 1 1 2 2 2 0 Septum formation initiator TRIQK PF15168.6 NODE_59787_length_277_cov_42.322314_g51847_i0reverse_frame_3 - 7.6 6.5 10.4 3.8 7.5 7.3 1.9 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family DEC-1_N PF04625.13 NODE_59786_length_277_cov_43.793388_g51846_i0forward_frame_3 - 2.1 7.3 5.8 2 7.4 5.8 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region TALPID3 PF15324.6 NODE_59786_length_277_cov_43.793388_g51846_i0forward_frame_3 - 2.6 5.6 5.7 2.7 5.6 5.7 1.0 1 0 0 1 1 1 0 Hedgehog signalling target TMEM169 PF15052.6 NODE_59782_length_277_cov_49.871901_g51842_i0reverse_frame_3 - 0.043 13.9 2.0 0.058 13.5 2.0 1.3 1 0 0 1 1 1 0 TMEM169 protein family DUF515 PF04415.12 NODE_59779_length_277_cov_51.719008_g51839_i0reverse_frame_3 - 0.43 8.9 7.9 0.44 8.9 7.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) SPK PF04435.18 NODE_59770_length_277_cov_61.421488_g51830_i0reverse_frame_2 - 0.022 15.2 0.7 0.039 14.4 0.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF545) DUF2576 PF10845.8 NODE_59767_length_277_cov_67.541322_g51827_i0forward_frame_2 - 0.063 12.9 0.1 0.12 12.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) DSL PF01414.19 NODE_59765_length_277_cov_70.384298_g51825_i0reverse_frame_2 - 0.2 12.0 4.6 0.36 11.1 4.6 1.4 1 1 0 1 1 1 0 Delta serrate ligand Imm1 PF14430.6 NODE_59763_length_277_cov_71.669421_g51823_i0reverse_frame_3 - 0.065 13.9 0.1 0.1 13.3 0.1 1.6 1 1 0 1 1 1 0 Immunity protein Imm1 Xpo1 PF08389.12 NODE_59763_length_277_cov_71.669421_g51823_i0reverse_frame_2 - 0.058 13.5 0.0 0.064 13.3 0.0 1.1 1 0 0 1 1 1 0 Exportin 1-like protein AbiEi_3 PF11459.8 NODE_59763_length_277_cov_71.669421_g51823_i0reverse_frame_2 - 0.093 12.4 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin, Type IV TA system RCC1_2 PF13540.6 NODE_59760_length_277_cov_74.929752_g51820_i0reverse_frame_2 - 1e-05 25.2 2.4 0.048 13.5 0.2 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_59760_length_277_cov_74.929752_g51820_i0reverse_frame_2 - 0.046 13.8 0.1 5.8 7.0 0.0 2.0 1 1 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 WW PF00397.26 NODE_59758_length_277_cov_75.884298_g51818_i0forward_frame_2 - 0.033 14.3 0.6 0.033 14.3 0.6 2.3 2 0 0 2 2 2 0 WW domain Sars6 PF12133.8 NODE_59757_length_277_cov_77.747934_g51817_i0forward_frame_3 - 0.039 13.9 0.4 0.065 13.2 0.4 1.3 1 0 0 1 1 1 0 Open reading frame 6 from SARS coronavirus RsgA_N PF16745.5 NODE_59756_length_277_cov_78.144628_g51816_i0reverse_frame_3 - 0.087 12.6 0.4 8.4 6.2 0.4 2.2 2 0 0 2 2 2 0 RsgA N-terminal domain CbeA_antitoxin PF06154.11 NODE_59755_length_277_cov_79.223140_g51815_i0reverse_frame_2 - 0.012 16.1 0.5 0.015 15.9 0.5 1.0 1 0 0 1 1 1 0 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A DUF4883 PF16224.5 NODE_59750_length_277_cov_84.285124_g51810_i0forward_frame_3 - 0.17 12.2 6.2 0.2 11.9 6.2 1.1 1 0 0 1 1 1 0 DOmain of unknown function (DUF4883) zf-C2HC_2 PF13913.6 NODE_59746_length_277_cov_99.066116_g51806_i0forward_frame_3 - 0.00058 19.7 0.7 0.0011 18.8 0.7 1.5 1 0 0 1 1 1 1 zinc-finger of a C2HC-type GlgX_C PF18390.1 NODE_59743_length_277_cov_108.388430_g51803_i0reverse_frame_2 - 0.059 13.2 0.0 0.072 12.9 0.0 1.2 1 0 0 1 1 1 0 Glycogen debranching enzyme C-terminal domain DUF2733 PF10813.8 NODE_59742_length_277_cov_127.355372_g51802_i0forward_frame_3 - 0.044 13.5 0.0 0.065 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) Nepo_coat_C PF03688.14 NODE_59742_length_277_cov_127.355372_g51802_i0forward_frame_2 - 0.11 12.3 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Nepovirus coat protein, C-terminal domain Gln-synt_N PF03951.19 NODE_59739_length_277_cov_140.309917_g51799_i0forward_frame_3 - 0.15 11.8 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Glutamine synthetase, beta-Grasp domain Chloroa_b-bind PF00504.21 NODE_59736_length_277_cov_187.938017_g51796_i0reverse_frame_3 - 0.093 13.3 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 Chlorophyll A-B binding protein DUF2897 PF11446.8 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.0033 17.3 0.1 0.0066 16.3 0.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2897) Phage_Gp23 PF10669.9 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.015 15.6 0.1 0.02 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) LapA_dom PF06305.11 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.023 14.5 0.9 0.051 13.4 0.9 1.6 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Conotoxin PF02950.17 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.029 15.4 0.2 0.036 15.1 0.2 1.1 1 0 0 1 1 1 0 Conotoxin Connexin PF00029.19 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.14 11.9 0.2 0.16 11.7 0.2 1.1 1 0 0 1 1 1 0 Connexin O-antigen_lig PF13425.6 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.15 10.9 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Tmemb_161AB PF10268.9 NODE_59735_length_277_cov_193.037190_g51795_i0reverse_frame_2 - 0.22 10.1 0.3 0.27 9.8 0.3 1.1 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB SCAMP PF04144.13 NODE_59731_length_277_cov_248.859504_g51791_i0reverse_frame_2 - 0.0058 17.0 0.6 0.0075 16.6 0.6 1.2 1 0 0 1 1 1 1 SCAMP family Phe_ZIP PF08916.11 NODE_59728_length_277_cov_277.504132_g51788_i0reverse_frame_2 - 0.01 16.5 4.0 2.1 9.1 0.4 2.2 2 0 0 2 2 2 0 Phenylalanine zipper RCC1_2 PF13540.6 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_3 - 6.9e-07 28.9 0.6 0.0052 16.6 0.1 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_3 - 0.094 12.8 0.1 7.1 6.7 0.0 2.1 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 GST_C_2 PF13410.6 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_3 - 0.096 12.7 0.0 4.9 7.2 0.0 2.2 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Peptidase_C36 PF05415.11 NODE_59728_length_277_cov_277.504132_g51788_i0forward_frame_3 - 0.14 12.4 0.0 0.32 11.2 0.0 1.6 1 1 1 2 2 2 0 Beet necrotic yellow vein furovirus-type papain-like endopeptidase Coronavirus_5 PF05528.11 NODE_59719_length_277_cov_6841.731405_g51779_i0forward_frame_2 - 0.11 12.5 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Coronavirus gene 5 protein LrgA PF03788.14 NODE_59718_length_277_cov_63829.268595_g51778_i0reverse_frame_3 - 0.19 11.7 5.7 0.97 9.4 5.7 2.0 1 1 0 1 1 1 0 LrgA family Rieske_3 PF18465.1 NODE_59718_length_277_cov_63829.268595_g51778_i0forward_frame_3 - 0.0096 16.2 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 1 Rieske 3Fe-4S 7TM_GPCR_Srt PF10321.9 NODE_59717_length_278_cov_0.893004_g51777_i0forward_frame_2 - 0.069 12.1 5.7 0.077 12.0 5.7 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt FSA_C PF10479.9 NODE_59712_length_278_cov_1.144033_g51772_i0reverse_frame_2 - 0.12 10.5 1.7 0.11 10.7 1.7 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus SSP160 PF06933.11 NODE_59712_length_278_cov_1.144033_g51772_i0reverse_frame_2 - 3.7 5.6 17.0 4.3 5.4 17.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 RskA PF10099.9 NODE_59712_length_278_cov_1.144033_g51772_i0forward_frame_3 - 0.016 15.6 0.7 0.021 15.1 0.7 1.3 1 0 0 1 1 1 0 Anti-sigma-K factor rskA Sh_2 PF17512.2 NODE_59712_length_278_cov_1.144033_g51772_i0forward_frame_3 - 0.031 14.0 1.3 0.036 13.8 1.3 1.1 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein Phage_holin_3_6 PF07332.11 NODE_59712_length_278_cov_1.144033_g51772_i0forward_frame_3 - 0.058 13.4 6.5 0.073 13.1 6.5 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Shisa PF13908.6 NODE_59712_length_278_cov_1.144033_g51772_i0forward_frame_3 - 0.14 12.4 0.9 0.14 12.4 0.9 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF805 PF05656.14 NODE_59712_length_278_cov_1.144033_g51772_i0forward_frame_3 - 0.42 11.1 4.9 0.46 10.9 4.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF805) EphA2_TM PF14575.6 NODE_59712_length_278_cov_1.144033_g51772_i0forward_frame_3 - 4.7 8.1 6.7 9.3 7.2 6.7 1.6 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ECSCR PF15820.5 NODE_59712_length_278_cov_1.144033_g51772_i0forward_frame_2 - 0.017 14.9 0.2 0.019 14.7 0.2 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator EphA2_TM PF14575.6 NODE_59712_length_278_cov_1.144033_g51772_i0forward_frame_2 - 0.084 13.8 0.7 0.11 13.4 0.7 1.4 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF1959 PF09218.10 NODE_59710_length_278_cov_1.189300_g51770_i0forward_frame_2 - 0.081 13.0 0.1 0.14 12.3 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1959) HET PF06985.11 NODE_59710_length_278_cov_1.189300_g51770_i0forward_frame_2 - 0.09 13.1 0.1 0.11 12.8 0.1 1.2 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) SLATT_1 PF18181.1 NODE_59708_length_278_cov_1.242798_g51768_i0reverse_frame_3 - 0.18 11.7 0.0 0.26 11.2 0.0 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 DUF1182 PF06681.13 NODE_59707_length_278_cov_1.251029_g51767_i0reverse_frame_3 - 0.048 13.2 7.0 0.06 12.9 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1182) Rtf2 PF04641.12 NODE_59704_length_278_cov_1.275720_g51764_i0reverse_frame_3 - 0.057 12.8 0.0 0.07 12.5 0.0 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger SPC12 PF06645.13 NODE_59704_length_278_cov_1.275720_g51764_i0forward_frame_3 - 0.38 10.9 3.4 3 8.0 0.7 2.1 1 1 1 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF1073 PF06381.11 NODE_59702_length_278_cov_1.312757_g51762_i0reverse_frame_3 - 0.19 10.5 0.0 0.23 10.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1073) CbiQ PF02361.16 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 0.021 14.5 3.9 0.024 14.3 3.9 1.0 1 0 0 1 1 1 0 Cobalt transport protein CPP1-like PF11833.8 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 0.23 11.1 4.0 0.3 10.7 4.0 1.2 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like CytochromB561_N PF09786.9 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 0.51 9.3 1.2 0.54 9.2 1.2 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal Tic110 PF16940.5 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 1.5 7.2 11.1 1.7 7.0 11.1 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter DUF3487 PF11990.8 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 2.2 8.2 6.1 2.7 7.9 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DUF2207 PF09972.9 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 2.6 6.7 3.8 3.1 6.5 3.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ABC2_membrane_2 PF12679.7 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 2.7 7.2 11.7 3.2 7.0 11.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein SLATT_1 PF18181.1 NODE_59701_length_278_cov_1.341564_g51761_i0reverse_frame_3 - 4.3 7.3 8.0 5.2 7.0 8.0 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 DUF3040 PF11239.8 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.0034 17.6 0.1 0.004 17.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3040) DUF5345 PF17280.2 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.063 13.3 9.3 0.05 13.6 7.7 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5345) MCU PF04678.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.07 13.2 5.4 0.079 13.1 5.4 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter DUF2368 PF10166.9 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.1 12.2 8.8 0.12 12.0 8.8 1.2 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2368) Pex14_N PF04695.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 0.29 11.8 13.0 0.33 11.6 13.0 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Presenilin PF01080.17 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 1 8.1 7.4 1.1 7.9 7.4 1.0 1 0 0 1 1 1 0 Presenilin Sec62 PF03839.16 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 1.7 8.1 8.5 2 7.9 8.5 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 TFIIA PF03153.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 4.2 7.3 24.0 4.5 7.2 24.0 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF4407 PF14362.6 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 4.3 6.6 9.6 5 6.4 9.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ALMT PF11744.8 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 9.7 4.9 7.1 12 4.6 7.1 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Ctr PF04145.15 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_3 - 9.9 6.8 7.0 12 6.5 7.0 1.1 1 0 0 1 1 1 0 Ctr copper transporter family Mucin PF01456.17 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 0.3 11.1 33.0 0.36 10.8 33.0 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein MGC-24 PF05283.11 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 0.45 11.0 14.7 0.55 10.7 14.7 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Adeno_PV PF03910.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 1.7 7.3 11.7 1.9 7.1 11.7 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV MelC1 PF06236.11 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 2.8 8.0 13.6 3.8 7.6 13.6 1.2 1 0 0 1 1 1 0 Tyrosinase co-factor MelC1 RIFIN PF02009.16 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 3.1 7.6 8.2 3.6 7.4 8.2 1.0 1 0 0 1 1 1 0 Rifin NUDE_C PF04880.13 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 4.1 7.8 7.3 4.8 7.6 7.3 1.0 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Herpes_UL74 PF07982.12 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 4.7 6.1 13.5 5.4 5.9 13.5 1.0 1 0 0 1 1 1 0 Herpes UL74 glycoproteins FSA_C PF10479.9 NODE_59701_length_278_cov_1.341564_g51761_i0forward_frame_2 - 7.8 4.5 14.5 8.3 4.4 14.5 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus ChiC PF06483.11 NODE_59699_length_278_cov_1.419753_g51759_i0forward_frame_2 - 0.0021 18.0 0.0 0.0023 17.9 0.0 1.0 1 0 0 1 1 1 1 Chitinase C Tombus_P19 PF03220.13 NODE_59697_length_278_cov_1.444444_g51757_i0reverse_frame_2 - 0.13 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Tombusvirus P19 core protein DUF5583 PF17821.1 NODE_59697_length_278_cov_1.444444_g51757_i0forward_frame_2 - 0.043 13.8 0.2 0.047 13.6 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5583) TPR_12 PF13424.6 NODE_59694_length_278_cov_1.514403_g51754_i0forward_frame_2 - 6e-08 32.9 0.0 1.6e-05 25.1 0.0 2.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_59694_length_278_cov_1.514403_g51754_i0forward_frame_2 - 0.0031 17.3 0.3 0.0053 16.5 0.3 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_59694_length_278_cov_1.514403_g51754_i0forward_frame_2 - 0.041 14.1 0.8 0.14 12.4 0.2 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_59694_length_278_cov_1.514403_g51754_i0forward_frame_2 - 0.06 13.5 0.1 0.12 12.5 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat IL11 PF07400.11 NODE_59693_length_278_cov_1.543210_g51753_i0reverse_frame_2 - 0.032 13.9 0.5 0.037 13.7 0.5 1.1 1 0 0 1 1 1 0 Interleukin 11 LTP_2 PF14368.6 NODE_59691_length_278_cov_1.580247_g51751_i0reverse_frame_2 - 0.069 13.3 0.1 0.093 12.8 0.1 1.4 1 0 0 1 1 1 0 Probable lipid transfer CreD PF06123.12 NODE_59690_length_278_cov_1.588477_g51750_i0reverse_frame_3 - 0.31 9.8 3.9 0.37 9.5 3.9 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD LNP1 PF15419.6 NODE_59689_length_278_cov_1.592593_g51749_i0reverse_frame_2 - 0.0092 16.2 0.9 0.0095 16.2 0.9 1.1 1 0 0 1 1 1 1 Leukemia NUP98 fusion partner 1 P5-ATPase PF12409.8 NODE_59689_length_278_cov_1.592593_g51749_i0forward_frame_2 - 2.3 8.3 7.8 3.6 7.7 7.8 1.5 1 1 0 1 1 1 0 P5-type ATPase cation transporter DnaI_N PF07319.11 NODE_59686_length_278_cov_1.654321_g51746_i0forward_frame_2 - 0.0089 16.7 6.1 0.01 16.5 6.1 1.1 1 0 0 1 1 1 1 Primosomal protein DnaI N-terminus Exonuc_VII_L PF02601.15 NODE_59686_length_278_cov_1.654321_g51746_i0forward_frame_2 - 0.15 11.6 4.0 0.17 11.5 4.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Rad50_zn_hook PF04423.14 NODE_59682_length_278_cov_1.711934_g51742_i0forward_frame_2 - 0.019 14.8 0.7 0.028 14.2 0.7 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif UCH PF00443.29 NODE_59680_length_278_cov_1.740741_g51740_i0forward_frame_3 - 5e-06 26.2 0.0 5.5e-06 26.1 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Ogr_Delta PF04606.12 NODE_59679_length_278_cov_1.748971_g51739_i0forward_frame_3 - 0.023 14.7 0.5 0.023 14.7 0.5 1.7 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Fcf1 PF04900.12 NODE_59678_length_278_cov_1.802469_g51738_i0forward_frame_2 - 0.077 13.4 0.0 0.092 13.2 0.0 1.1 1 0 0 1 1 1 0 Fcf1 TPR_1 PF00515.28 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 3.8e-05 23.3 0.9 0.044 13.6 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 6.8e-05 22.7 1.2 0.1 12.8 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.0018 18.3 1.2 1.8 9.0 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.004 17.0 0.3 0.073 13.0 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.0095 16.2 0.1 0.068 13.5 0.1 2.1 1 1 0 1 1 1 1 Tetratricopeptide repeat DDT PF02791.17 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.076 13.3 0.0 0.22 11.8 0.0 1.7 2 0 0 2 2 2 0 DDT domain TPR_7 PF13176.6 NODE_59677_length_278_cov_1.806584_g51737_i0reverse_frame_2 - 0.082 13.0 0.8 6.9 6.9 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF4614 PF15391.6 NODE_59676_length_278_cov_1.818930_g51736_i0forward_frame_2 - 0.5 10.3 3.1 0.61 10.1 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) UBA PF00627.31 NODE_59675_length_278_cov_1.835391_g51735_i0forward_frame_2 - 0.086 12.8 0.1 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 UBA/TS-N domain Pox_A31 PF05771.11 NODE_59674_length_278_cov_1.855967_g51734_i0reverse_frame_2 - 0.097 12.7 0.2 0.26 11.3 0.1 1.6 1 1 1 2 2 2 0 Poxvirus A31 protein Mad3_BUB1_I_2 PF17014.5 NODE_59673_length_278_cov_1.888889_g51733_i0reverse_frame_3 - 0.018 15.2 0.5 0.029 14.5 0.4 1.5 1 1 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein Rrn6 PF10214.9 NODE_59673_length_278_cov_1.888889_g51733_i0reverse_frame_3 - 0.12 10.8 3.9 0.13 10.7 3.9 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor AstB PF04996.12 NODE_59672_length_278_cov_1.901235_g51732_i0reverse_frame_2 - 3.1e-37 128.3 0.1 3.4e-37 128.2 0.1 1.0 1 0 0 1 1 1 1 Succinylarginine dihydrolase DUF4795 PF16043.5 NODE_59671_length_278_cov_1.921811_g51731_i0reverse_frame_3 - 0.054 13.1 3.0 0.067 12.8 3.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) Microcin PF03526.13 NODE_59670_length_278_cov_1.958848_g51730_i0reverse_frame_2 - 0.12 12.2 0.2 0.12 12.2 0.2 2.1 2 0 0 2 2 2 0 Colicin E1 (microcin) immunity protein PMT_4TMC PF16192.5 NODE_59668_length_278_cov_2.004115_g51728_i0forward_frame_3 - 0.061 12.9 4.6 0.068 12.8 4.6 1.1 1 0 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase MerB PF03243.15 NODE_59663_length_278_cov_2.111111_g51723_i0forward_frame_2 - 0.046 13.9 0.1 0.049 13.8 0.1 1.2 1 0 0 1 1 1 0 Alkylmercury lyase Arm PF00514.23 NODE_59661_length_278_cov_2.205761_g51721_i0forward_frame_3 - 0.00034 20.5 0.1 0.24 11.5 0.0 3.0 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat RNA_capsid PF03035.14 NODE_59657_length_278_cov_2.218107_g51717_i0reverse_frame_3 - 0.14 12.2 0.6 0.15 12.0 0.6 1.1 1 0 0 1 1 1 0 Calicivirus putative RNA polymerase/capsid protein YMF19 PF02326.15 NODE_59655_length_278_cov_2.267490_g51715_i0reverse_frame_3 - 2.1 9.2 7.0 5.6 7.8 7.0 1.8 1 1 0 1 1 1 0 Plant ATP synthase F0 zf-HYPF PF07503.12 NODE_59655_length_278_cov_2.267490_g51715_i0reverse_frame_2 - 0.11 12.2 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 HypF finger E7 PF00527.18 NODE_59655_length_278_cov_2.267490_g51715_i0reverse_frame_2 - 4.2 7.6 9.6 11 6.3 9.6 1.8 1 1 0 1 1 1 0 E7 protein, Early protein CPP1-like PF11833.8 NODE_59655_length_278_cov_2.267490_g51715_i0forward_frame_3 - 0.19 11.4 7.5 0.2 11.3 7.5 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like NPCC PF08058.11 NODE_59655_length_278_cov_2.267490_g51715_i0forward_frame_2 - 5 7.2 4.9 5.9 6.9 4.9 1.1 1 0 0 1 1 1 0 Nuclear pore complex component MORN PF02493.20 NODE_59652_length_278_cov_2.353909_g51712_i0reverse_frame_3 - 6.4e-12 44.6 11.7 3.9e-06 26.4 0.4 3.7 4 0 0 4 4 4 3 MORN repeat DUF3916 PF13079.6 NODE_59652_length_278_cov_2.353909_g51712_i0reverse_frame_3 - 0.017 15.0 0.2 3.6 7.5 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3916) Papo_T_antigen PF02380.15 NODE_59650_length_278_cov_2.395062_g51710_i0forward_frame_2 - 0.021 14.9 1.1 0.028 14.6 0.5 1.5 2 0 0 2 2 2 0 T-antigen specific domain Siva PF05458.12 NODE_59649_length_278_cov_2.432099_g51709_i0forward_frame_2 - 0.47 10.1 9.6 0.56 9.9 9.6 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) DUF4360 PF14273.6 NODE_59648_length_278_cov_2.432099_g51708_i0forward_frame_3 - 0.12 12.3 0.2 0.14 12.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4360) NOG1_N PF17835.1 NODE_59644_length_278_cov_2.810700_g51704_i0reverse_frame_3 - 0.003 17.5 1.0 0.0036 17.3 1.0 1.2 1 0 0 1 1 1 1 NOG1 N-terminal helical domain Peptidase_C26 PF07722.13 NODE_59644_length_278_cov_2.810700_g51704_i0reverse_frame_3 - 0.048 13.4 0.0 0.052 13.3 0.0 1.0 1 0 0 1 1 1 0 Peptidase C26 RabGAP-TBC PF00566.18 NODE_59644_length_278_cov_2.810700_g51704_i0reverse_frame_3 - 0.34 10.5 2.8 0.42 10.2 2.8 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain GCP_N_terminal PF17681.1 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.019 14.6 0.1 0.024 14.3 0.1 1.1 1 0 0 1 1 1 0 Gamma tubulin complex component N-terminal BID PF06393.11 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.022 14.3 0.2 0.027 14.0 0.2 1.1 1 0 0 1 1 1 0 BH3 interacting domain (BID) HEPN_RnaseLS PF18869.1 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.032 14.4 0.2 0.034 14.3 0.2 1.2 1 0 0 1 1 1 0 RnaseLS-like HEPN URO-D PF01208.17 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.036 13.2 0.0 0.036 13.2 0.0 1.0 1 0 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) Phage_int_SAM_5 PF13102.6 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.078 13.3 1.1 0.89 9.9 0.8 2.2 1 1 0 1 1 1 0 Phage integrase SAM-like domain TPPII_N PF12583.8 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.078 13.6 0.0 0.09 13.4 0.0 1.2 1 0 0 1 1 1 0 Tripeptidyl peptidase II N terminal DNA_pol3_theta PF06440.11 NODE_59643_length_278_cov_2.888889_g51703_i0reverse_frame_2 - 0.13 11.9 0.4 0.62 9.8 0.2 1.9 1 1 1 2 2 2 0 DNA polymerase III, theta subunit Lamprin PF06403.11 NODE_59641_length_278_cov_2.930041_g51701_i0reverse_frame_3 - 0.036 14.0 0.6 0.041 13.8 0.6 1.1 1 0 0 1 1 1 0 Lamprin Dabb PF07876.12 NODE_59640_length_278_cov_3.123457_g51700_i0reverse_frame_2 - 0.16 12.6 0.0 0.21 12.3 0.0 1.3 1 1 0 1 1 1 0 Stress responsive A/B Barrel Domain MCPsignal PF00015.21 NODE_59639_length_278_cov_3.168724_g51699_i0forward_frame_2 - 2.8e-31 108.6 10.5 3.5e-31 108.3 10.5 1.1 1 0 0 1 1 1 1 Methyl-accepting chemotaxis protein (MCP) signalling domain Nucleos_tra2_C PF07662.13 NODE_59639_length_278_cov_3.168724_g51699_i0forward_frame_2 - 0.019 14.8 0.1 0.021 14.7 0.1 1.1 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus DUF948 PF06103.11 NODE_59639_length_278_cov_3.168724_g51699_i0forward_frame_2 - 0.027 14.7 0.6 0.034 14.4 0.6 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) T7SS_ESX_EspC PF10824.8 NODE_59639_length_278_cov_3.168724_g51699_i0forward_frame_2 - 0.051 14.0 2.3 0.1 13.0 0.2 2.1 1 1 1 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm SHQ1 PF04925.15 NODE_59638_length_278_cov_3.213992_g51698_i0forward_frame_3 - 0.059 12.9 0.0 0.066 12.8 0.0 1.1 1 0 0 1 1 1 0 SHQ1 protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks290.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks290.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks290.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks290.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Fer4 PF00037.27 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.00016 21.3 2.5 0.00016 21.3 2.5 1.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.0002 21.3 7.7 0.0014 18.6 3.5 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.0014 18.6 2.7 0.0014 18.6 2.7 2.1 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.0063 17.1 7.8 0.0099 16.4 7.5 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.028 14.5 2.9 0.028 14.5 2.9 1.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.044 14.0 7.8 0.07 13.3 3.7 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 0.11 12.7 7.4 0.25 11.5 7.4 1.7 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_59635_length_278_cov_3.456790_g51695_i0forward_frame_2 - 1.6 9.5 10.3 0.3 11.7 2.6 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain SMP PF04927.12 NODE_59634_length_278_cov_3.506173_g51694_i0reverse_frame_3 - 0.68 10.5 8.4 1.1 9.8 7.3 1.7 1 1 1 2 2 2 0 Seed maturation protein Kp4 PF09044.10 NODE_59634_length_278_cov_3.506173_g51694_i0forward_frame_2 - 0.11 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Kp4 MoCF_biosynth PF00994.24 NODE_59633_length_278_cov_3.901235_g51693_i0forward_frame_2 - 3.8e-18 65.5 0.0 4.4e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain Conotoxin_I2 PF17557.2 NODE_59632_length_278_cov_4.312757_g51692_i0reverse_frame_2 - 0.027 14.6 9.4 0.068 13.3 9.4 1.6 1 0 0 1 1 1 0 I2-superfamily conotoxins Antimicrobial23 PF16048.5 NODE_59631_length_278_cov_11.584362_g51691_i0reverse_frame_2 - 0.084 12.6 2.6 0.2 11.4 2.6 1.6 1 0 0 1 1 1 0 Frog antimicrobial peptide cNMP_binding PF00027.29 NODE_59628_length_278_cov_28.555556_g51688_i0forward_frame_3 - 4.5e-06 26.7 0.0 5.6e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain NIR_SIR PF01077.22 NODE_59626_length_278_cov_33.131687_g51686_i0reverse_frame_3 - 0.0042 16.6 0.0 0.0047 16.5 0.0 1.1 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Arrestin_C PF02752.22 NODE_59620_length_278_cov_46.205761_g51680_i0reverse_frame_2 - 0.073 13.5 0.5 0.086 13.3 0.5 1.1 1 0 0 1 1 1 0 Arrestin (or S-antigen), C-terminal domain FOXO_KIX_bdg PF16675.5 NODE_59620_length_278_cov_46.205761_g51680_i0reverse_frame_2 - 0.085 13.2 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 KIX-binding domain of forkhead box O, CR2 zf-RING_4 PF14570.6 NODE_59620_length_278_cov_46.205761_g51680_i0forward_frame_2 - 0.47 10.3 5.3 0.19 11.6 1.8 1.9 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain LAT PF15234.6 NODE_59619_length_278_cov_47.296296_g51679_i0forward_frame_3 - 0.55 9.9 1.6 0.64 9.7 1.6 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells FixG_C PF11614.8 NODE_59616_length_278_cov_50.530864_g51676_i0reverse_frame_3 - 0.0053 17.0 0.3 0.007 16.6 0.2 1.4 1 1 0 1 1 1 1 IG-like fold at C-terminal of FixG, putative oxidoreductase UvrA_inter PF17760.1 NODE_59615_length_278_cov_50.580247_g51675_i0reverse_frame_3 - 0.034 14.2 0.1 0.042 13.9 0.1 1.1 1 0 0 1 1 1 0 UvrA interaction domain CEP1-DNA_bind PF09287.10 NODE_59615_length_278_cov_50.580247_g51675_i0reverse_frame_2 - 0.021 14.5 0.7 0.022 14.4 0.7 1.1 1 0 0 1 1 1 0 CEP-1, DNA binding Collagen_bind_2 PF12904.7 NODE_59613_length_278_cov_51.037037_g51673_i0reverse_frame_2 - 0.096 12.7 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Putative collagen-binding domain of a collagenase LRR_6 PF13516.6 NODE_59611_length_278_cov_52.053498_g51671_i0forward_frame_3 - 0.016 15.2 0.5 0.032 14.3 0.1 1.8 2 0 0 2 2 2 0 Leucine Rich repeat Sel1 PF08238.12 NODE_59610_length_278_cov_53.028807_g51670_i0reverse_frame_3 - 6.8e-08 33.0 2.0 6.8e-08 33.0 2.0 2.1 2 0 0 2 2 2 1 Sel1 repeat SLATT_5 PF18160.1 NODE_59604_length_278_cov_58.691358_g51664_i0forward_frame_2 - 0.28 10.5 5.9 0.36 10.1 5.9 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 RNA_pol_Rpb1_6 PF04992.14 NODE_59603_length_278_cov_60.078189_g51663_i0forward_frame_3 - 0.011 15.6 0.2 0.015 15.2 0.2 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 6 Troponin-I_N PF11636.8 NODE_59602_length_278_cov_61.102881_g51662_i0forward_frame_2 - 0.11 12.4 0.9 0.19 11.7 0.9 1.6 1 0 0 1 1 1 0 Troponin I residues 1-32 JTB PF05439.12 NODE_59601_length_278_cov_64.633745_g51661_i0reverse_frame_3 - 0.013 15.5 0.3 0.015 15.3 0.3 1.3 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) L51_S25_CI-B8 PF05047.16 NODE_59601_length_278_cov_64.633745_g51661_i0reverse_frame_2 - 0.071 13.1 0.1 6.8 6.7 0.0 2.2 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain Inv-AAD PF18785.1 NODE_59600_length_278_cov_69.407407_g51660_i0reverse_frame_2 - 0.11 12.3 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Invertebrate-AID/APOBEC-deaminase HTH_Tnp_IS1 PF12759.7 NODE_59600_length_278_cov_69.407407_g51660_i0reverse_frame_2 - 0.17 11.5 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 InsA C-terminal domain SASRP1 PF15160.6 NODE_59598_length_278_cov_77.584362_g51658_i0reverse_frame_2 - 0.67 9.6 11.0 0.81 9.3 11.0 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 Bacillus_PapR PF05968.11 NODE_59587_length_278_cov_116.559671_g51647_i0reverse_frame_2 - 0.093 12.6 0.0 0.52 10.2 0.0 2.0 2 0 0 2 2 2 0 Bacillus PapR protein DUF4783 PF16022.5 NODE_59585_length_278_cov_129.049383_g51645_i0forward_frame_2 - 0.037 14.2 0.0 0.058 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4783) DUF1907 PF08925.11 NODE_59584_length_278_cov_144.658436_g51644_i0reverse_frame_3 - 0.12 11.7 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1907) Defensin_big PF14862.6 NODE_59582_length_278_cov_162.691358_g51642_i0forward_frame_3 - 0.39 11.0 3.6 5.5 7.4 2.0 2.2 1 1 1 2 2 2 0 Big defensin DUF3959 PF13105.6 NODE_59578_length_278_cov_194.209877_g51638_i0forward_frame_2 - 0.035 13.6 1.4 0.037 13.5 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) 14-3-3 PF00244.20 NODE_59577_length_278_cov_199.930041_g51637_i0reverse_frame_2 - 0.037 13.5 0.7 0.042 13.4 0.7 1.1 1 0 0 1 1 1 0 14-3-3 protein Ribosomal_L39 PF00832.20 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 1.4e-19 69.4 10.5 2.2e-19 68.8 10.5 1.3 1 0 0 1 1 1 1 Ribosomal L39 protein Pex14_N PF04695.13 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 0.018 15.7 1.7 0.021 15.5 1.7 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3449 PF11931.8 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 0.021 14.6 1.3 0.025 14.4 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) Roughex PF06020.11 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 0.041 13.0 1.3 0.039 13.1 1.3 1.1 1 0 0 1 1 1 0 Drosophila roughex protein Adeno_52K PF03052.15 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_3 - 0.052 13.0 2.0 0.053 12.9 2.0 1.1 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa Chorion_3 PF05387.11 NODE_59574_length_278_cov_403.061728_g51634_i0reverse_frame_2 - 0.024 14.3 1.3 0.024 14.3 1.3 1.1 1 0 0 1 1 1 0 Chorion family 3 PRIMA1 PF16101.5 NODE_59574_length_278_cov_403.061728_g51634_i0forward_frame_3 - 2.6 8.1 12.7 3.8 7.6 12.7 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Mito_fiss_reg PF05308.11 NODE_59574_length_278_cov_403.061728_g51634_i0forward_frame_3 - 7.8 6.5 6.0 8.5 6.4 6.0 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator SsgA PF04686.12 NODE_59572_length_278_cov_740.292181_g51632_i0forward_frame_3 - 0.021 14.8 0.0 0.024 14.6 0.0 1.1 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA zf_C2HC_14 PF18574.1 NODE_59572_length_278_cov_740.292181_g51632_i0forward_frame_2 - 4.5 7.2 7.4 0.47 10.3 3.1 1.6 2 0 0 2 2 2 0 C2HC Zing finger domain Phage_integrase PF00589.22 NODE_59569_length_279_cov_0.872951_g51629_i0forward_frame_2 - 0.02 14.7 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Phage integrase family Ig_5 PF16681.5 NODE_59569_length_279_cov_0.872951_g51629_i0forward_frame_2 - 0.4 11.1 1.7 2.6 8.5 0.4 2.1 1 1 1 2 2 2 0 Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain DUF3130 PF11328.8 NODE_59566_length_279_cov_1.016393_g51626_i0forward_frame_3 - 0.063 13.5 0.1 0.08 13.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3130 HTH_Tnp_Mu_1 PF02316.16 NODE_59565_length_279_cov_1.020492_g51625_i0reverse_frame_3 - 0.17 12.0 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Mu DNA-binding domain DUF1363 PF07101.11 NODE_59562_length_279_cov_1.262295_g51622_i0forward_frame_3 - 0.066 13.5 0.3 0.095 13.0 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1363) DUF4599 PF15371.6 NODE_59561_length_279_cov_1.282787_g51621_i0reverse_frame_3 - 0.1 13.2 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4599) RNaseH_C PF09293.10 NODE_59560_length_279_cov_1.286885_g51620_i0forward_frame_3 - 0.031 14.6 0.1 0.059 13.7 0.1 1.4 1 1 0 1 1 1 0 T4 RNase H, C terminal Rep_1 PF01446.17 NODE_59554_length_279_cov_1.393443_g51614_i0forward_frame_3 - 0.062 12.8 0.8 0.062 12.8 0.8 1.5 2 0 0 2 2 2 0 Replication protein Hce2 PF14856.6 NODE_59554_length_279_cov_1.393443_g51614_i0forward_frame_2 - 0.041 14.2 0.1 0.051 13.9 0.1 1.2 1 0 0 1 1 1 0 Pathogen effector; putative necrosis-inducing factor Mob1_phocein PF03637.17 NODE_59551_length_279_cov_1.471311_g51611_i0reverse_frame_2 - 0.094 12.7 0.2 0.12 12.4 0.2 1.1 1 0 0 1 1 1 0 Mob1/phocein family DUF3488 PF11992.8 NODE_59551_length_279_cov_1.471311_g51611_i0forward_frame_3 - 1.1 8.2 6.1 1.2 8.0 6.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF4131 PF13567.6 NODE_59551_length_279_cov_1.471311_g51611_i0forward_frame_2 - 0.92 9.1 2.9 1.1 8.9 2.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Toxin_37 PF11415.8 NODE_59548_length_279_cov_1.549180_g51608_i0forward_frame_2 - 0.2 11.5 0.3 0.2 11.5 0.3 2.3 2 0 0 2 2 2 0 Antifungal peptide termicin Hepatitis_core PF00906.20 NODE_59544_length_279_cov_1.594262_g51604_i0reverse_frame_2 - 0.097 12.2 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Hepatitis core antigen DUF1477 PF07346.11 NODE_59544_length_279_cov_1.594262_g51604_i0forward_frame_3 - 0.11 12.7 2.1 0.16 12.3 1.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1477) BaffR-Tall_bind PF09256.10 NODE_59544_length_279_cov_1.594262_g51604_i0forward_frame_2 - 0.0083 15.9 0.3 0.017 14.8 0.3 1.5 1 0 0 1 1 1 1 BAFF-R, TALL-1 binding Rpr2 PF04032.16 NODE_59538_length_279_cov_1.758197_g51598_i0reverse_frame_2 - 0.1 12.9 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain VWA_3 PF13768.6 NODE_59537_length_279_cov_1.778689_g51597_i0reverse_frame_3 - 3.5e-11 43.3 0.0 3.9e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 NODE_59537_length_279_cov_1.778689_g51597_i0reverse_frame_3 - 3.8e-05 24.3 0.0 5e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 von Willebrand factor type A domain ubiquitin PF00240.23 NODE_59535_length_279_cov_1.799180_g51595_i0reverse_frame_3 - 2e-09 37.1 0.0 2.5e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_59535_length_279_cov_1.799180_g51595_i0reverse_frame_3 - 0.00051 19.8 0.1 0.0006 19.6 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 NODE_59535_length_279_cov_1.799180_g51595_i0reverse_frame_3 - 0.11 12.5 0.1 6.5 6.9 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain DUF4820 PF16091.5 NODE_59531_length_279_cov_1.807377_g51591_i0reverse_frame_2 - 0.019 14.4 0.6 0.02 14.2 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) DUF1296 PF06972.11 NODE_59529_length_279_cov_1.856557_g51589_i0reverse_frame_3 - 0.021 15.0 0.1 1.4 9.1 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1296) PAGK PF15284.6 NODE_59528_length_279_cov_1.905738_g51588_i0reverse_frame_3 - 0.014 15.3 1.1 0.02 14.8 1.1 1.2 1 0 0 1 1 1 0 Phage-encoded virulence factor GSu_C4xC__C2xCH PF09698.10 NODE_59527_length_279_cov_1.909836_g51587_i0reverse_frame_2 - 0.072 13.9 3.3 0.14 13.0 3.3 1.4 1 0 0 1 1 1 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) DUF3341 PF11821.8 NODE_59527_length_279_cov_1.909836_g51587_i0forward_frame_2 - 0.06 13.0 0.2 0.076 12.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) ArfGap PF01412.18 NODE_59525_length_279_cov_1.938525_g51585_i0forward_frame_2 - 0.68 10.0 5.3 0.85 9.7 5.3 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf CARMIL_C PF16000.5 NODE_59524_length_279_cov_2.000000_g51584_i0reverse_frame_3 - 0.011 15.4 0.4 0.011 15.3 0.4 1.1 1 0 0 1 1 1 0 CARMIL C-terminus Hormone_recep PF00104.30 NODE_59524_length_279_cov_2.000000_g51584_i0forward_frame_3 - 0.02 14.4 2.6 0.023 14.3 2.6 1.1 1 0 0 1 1 1 0 Ligand-binding domain of nuclear hormone receptor Myofilin PF15929.5 NODE_59517_length_279_cov_2.139344_g51577_i0forward_frame_2 - 0.078 13.4 0.1 0.097 13.1 0.1 1.1 1 0 0 1 1 1 0 Myofilin Peptidase_C5 PF00770.18 NODE_59516_length_279_cov_2.151639_g51576_i0forward_frame_3 - 0.032 13.9 2.1 0.038 13.7 2.1 1.0 1 0 0 1 1 1 0 Adenovirus endoprotease VipB PF05943.12 NODE_59515_length_279_cov_2.172131_g51575_i0forward_frame_3 - 0.003 16.4 0.0 0.0033 16.3 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion protein, EvpB/VC_A0108, tail sheath PPDFL PF15060.6 NODE_59514_length_279_cov_2.266393_g51574_i0reverse_frame_3 - 0.064 13.8 0.1 0.077 13.5 0.1 1.1 1 0 0 1 1 1 0 Differentiation and proliferation regulator PLN_propep PF16485.5 NODE_59513_length_279_cov_2.348361_g51573_i0forward_frame_3 - 0.11 12.3 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Protealysin propeptide Orthopox_F6 PF06601.12 NODE_59512_length_279_cov_2.348361_g51572_i0reverse_frame_3 - 0.066 13.4 0.1 0.11 12.7 0.1 1.4 1 1 0 1 1 1 0 Orthopoxvirus F6 protein Fe_dep_repress PF01325.19 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 2.5e-11 43.6 0.0 3.5e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 4.9e-07 29.6 0.0 7e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 2.4e-06 27.3 0.2 5.2e-06 26.2 0.1 1.5 1 1 0 1 1 1 1 MarR family HTH_24 PF13412.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 3.3e-06 26.6 0.0 4.5e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 8.2e-06 25.7 0.0 1e-05 25.4 0.0 1.3 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain GntR PF00392.21 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 1.2e-05 24.9 0.2 5.5e-05 22.7 0.0 2.1 1 1 1 2 2 2 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 6.5e-05 22.7 0.0 8.8e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.00073 20.0 0.1 0.0012 19.3 0.1 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0012 18.6 0.0 0.0018 18.0 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_50 PF18024.1 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0013 18.3 0.0 0.0025 17.4 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0014 18.5 0.0 0.0021 18.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0018 18.1 0.0 0.0025 17.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_1 PF00126.27 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0018 18.2 0.1 0.0048 16.8 0.1 1.8 1 1 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_37 PF13744.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0069 16.3 0.0 0.0091 15.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0069 16.2 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_23 PF13384.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.0078 16.0 0.0 0.012 15.4 0.0 1.5 1 1 0 1 1 1 1 Homeodomain-like domain HTH_AsnC-type PF13404.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.013 15.3 0.2 0.019 14.8 0.2 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Rrf2 PF02082.20 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.015 15.6 0.0 0.019 15.3 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator LexA_DNA_bind PF01726.16 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.019 14.8 0.0 0.028 14.2 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain HTH_6 PF01418.17 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.021 14.8 0.0 0.033 14.2 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain, rpiR family HTH_29 PF13551.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.033 14.2 0.0 0.058 13.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix DUF2089 PF09862.9 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.033 14.2 0.0 0.036 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) DUF2250 PF10007.9 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.035 14.2 0.0 0.045 13.9 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_31 PF13560.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.04 14.2 0.1 0.059 13.7 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.7 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.041 13.9 0.0 0.087 12.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain TFIIE_alpha PF02002.17 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.042 13.7 0.0 0.048 13.5 0.0 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_38 PF13936.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.048 13.4 0.0 0.067 13.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4423 PF14394.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.051 13.3 0.0 0.071 12.8 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) KORA PF16509.5 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.058 13.7 0.0 0.073 13.3 0.0 1.3 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_47 PF16221.5 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.061 12.9 0.1 0.092 12.3 0.1 1.3 1 0 0 1 1 1 0 winged helix-turn-helix FeoC PF09012.10 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.063 13.3 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator HTH_10 PF04967.12 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.072 12.9 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain HTH_11 PF08279.12 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.081 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 HTH domain AbiEi_4 PF13338.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.084 13.0 0.1 0.15 12.3 0.1 1.6 1 1 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin HTH_28 PF13518.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.093 12.9 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.12 12.4 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix DUF4112 PF13430.6 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.14 12.4 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4112) UBA_6 PF18039.1 NODE_59511_length_279_cov_2.405738_g51571_i0forward_frame_2 - 0.16 11.9 0.0 0.34 10.9 0.0 1.6 1 0 0 1 1 1 0 UBA-like domain TrbC PF04956.13 NODE_59510_length_279_cov_2.450820_g51570_i0forward_frame_2 - 0.094 12.9 2.1 0.13 12.5 2.1 1.2 1 0 0 1 1 1 0 TrbC/VIRB2 family FliW PF02623.15 NODE_59507_length_279_cov_2.512295_g51567_i0reverse_frame_2 - 0.066 13.1 0.2 0.079 12.9 0.2 1.1 1 0 0 1 1 1 0 FliW protein DUF2026 PF09641.10 NODE_59499_length_279_cov_2.827869_g51559_i0forward_frame_3 - 0.17 11.5 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2026) DUF5539 PF17693.1 NODE_59498_length_279_cov_2.926230_g51558_i0reverse_frame_3 - 0.13 11.9 4.3 0.15 11.7 4.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5539) Leader_Trp PF08255.11 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_3 - 0.024 14.5 0.7 0.057 13.4 0.7 1.6 1 0 0 1 1 1 0 Trp-operon Leader Peptide ABC_tran PF00005.27 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 2.1e-11 44.5 0.2 2.4e-11 44.3 0.2 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 8.5e-05 22.2 0.2 0.00011 21.9 0.2 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.00031 20.7 0.0 0.00034 20.5 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0013 18.8 0.1 0.0021 18.1 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0021 18.6 0.0 0.0024 18.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0027 17.6 0.1 0.0035 17.2 0.1 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0068 16.1 0.3 0.012 15.4 0.2 1.4 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.0087 16.5 0.1 0.0097 16.3 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.01 16.1 0.1 0.012 15.8 0.1 1.1 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.012 15.7 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.017 14.5 0.1 0.02 14.3 0.1 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family Ploopntkinase3 PF18751.1 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.024 14.5 0.0 0.031 14.2 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_22 PF13401.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.025 14.9 0.2 0.036 14.3 0.2 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.052 13.7 0.1 0.062 13.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.059 12.8 0.1 0.068 12.6 0.1 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.068 12.7 0.0 0.076 12.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.069 12.3 0.1 0.072 12.3 0.1 1.1 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.071 13.0 0.1 0.089 12.7 0.1 1.2 1 0 0 1 1 1 0 NACHT domain Septin PF00735.18 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.082 12.2 0.0 0.098 11.9 0.0 1.1 1 0 0 1 1 1 0 Septin AAA_18 PF13238.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.095 13.2 0.2 0.12 12.9 0.2 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.13 12.0 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.14 11.2 0.0 0.15 11.1 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.15 12.5 0.1 0.23 11.9 0.1 1.4 1 0 0 1 1 1 0 RNA helicase AAA_15 PF13175.6 NODE_59491_length_279_cov_3.200820_g51551_i0forward_frame_2 - 0.23 11.1 0.2 0.28 10.9 0.2 1.0 1 0 0 1 1 1 0 AAA ATPase domain Hyccin PF09790.9 NODE_59489_length_279_cov_3.282787_g51549_i0reverse_frame_2 - 0.002 17.3 0.7 0.0022 17.2 0.7 1.1 1 0 0 1 1 1 1 Hyccin Frigida PF07899.11 NODE_59489_length_279_cov_3.282787_g51549_i0reverse_frame_2 - 0.16 11.2 0.2 0.19 11.0 0.2 1.1 1 0 0 1 1 1 0 Frigida-like protein YBD PF17725.1 NODE_59487_length_279_cov_4.143443_g51547_i0reverse_frame_2 - 0.13 12.1 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 YAP binding domain ZipA_C PF04354.13 NODE_59487_length_279_cov_4.143443_g51547_i0forward_frame_2 - 1.2e-12 47.8 0.0 1.4e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 ZipA, C-terminal FtsZ-binding domain TonB_N PF16031.5 NODE_59487_length_279_cov_4.143443_g51547_i0forward_frame_2 - 0.051 14.1 9.4 0.063 13.8 9.4 1.2 1 0 0 1 1 1 0 TonB polyproline region OAD_gamma PF04277.13 NODE_59487_length_279_cov_4.143443_g51547_i0forward_frame_2 - 2.6 8.7 4.2 3.3 8.4 4.2 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Nanovirus_C8 PF05629.11 NODE_59486_length_279_cov_4.901639_g51546_i0forward_frame_2 - 0.23 11.6 0.5 0.27 11.3 0.5 1.1 1 0 0 1 1 1 0 Nanovirus component 8 (C8) protein DUF2607 PF10795.9 NODE_59484_length_279_cov_20.434426_g51544_i0forward_frame_2 - 0.0032 17.6 2.2 0.0037 17.4 2.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2607) NIR_SIR PF01077.22 NODE_59483_length_279_cov_32.831967_g51543_i0forward_frame_3 - 0.012 15.1 0.0 0.018 14.6 0.0 1.3 1 1 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59482_length_279_cov_32.831967_g51542_i0reverse_frame_3 - 0.025 14.1 0.0 0.037 13.5 0.0 1.3 1 1 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR PF01077.22 NODE_59481_length_279_cov_33.028689_g51541_i0reverse_frame_3 - 0.07 12.6 0.0 0.099 12.1 0.0 1.3 1 1 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain DUF1664 PF07889.12 NODE_59480_length_279_cov_33.036885_g51540_i0reverse_frame_2 - 0.09 12.8 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF1815 PF08844.10 NODE_59480_length_279_cov_33.036885_g51540_i0forward_frame_2 - 0.082 12.9 0.3 0.094 12.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) DUF1736 PF08409.11 NODE_59477_length_279_cov_38.885246_g51537_i0forward_frame_3 - 0.023 14.7 2.7 0.062 13.3 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1736) Ank_4 PF13637.6 NODE_59476_length_279_cov_40.581967_g51536_i0reverse_frame_3 - 4.5e-08 33.5 0.1 6.4e-08 33.0 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_59476_length_279_cov_40.581967_g51536_i0reverse_frame_3 - 3.6e-07 30.7 0.0 4.2e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_59476_length_279_cov_40.581967_g51536_i0reverse_frame_3 - 7.6e-05 22.8 0.0 0.48 11.2 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_59476_length_279_cov_40.581967_g51536_i0reverse_frame_3 - 0.01 16.1 0.3 0.75 10.2 0.0 2.1 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Selenoprotein_S PF06936.11 NODE_59476_length_279_cov_40.581967_g51536_i0reverse_frame_2 - 0.34 10.7 0.9 0.45 10.3 0.9 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) SNAD3 PF18749.1 NODE_59475_length_279_cov_44.827869_g51535_i0reverse_frame_3 - 0.035 13.3 3.8 0.036 13.2 3.8 1.0 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 3 PAP_assoc PF03828.19 NODE_59474_length_279_cov_49.639344_g51534_i0forward_frame_3 - 0.09 13.0 0.2 0.16 12.2 0.2 1.4 1 0 0 1 1 1 0 Cid1 family poly A polymerase Inhibitor_I71 PF12628.7 NODE_59473_length_279_cov_50.393443_g51533_i0reverse_frame_2 - 0.0099 15.7 4.1 0.012 15.4 4.1 1.1 1 0 0 1 1 1 1 Falstatin, cysteine peptidase inhibitor NDUF_B12 PF08122.12 NODE_59471_length_279_cov_57.331967_g51531_i0reverse_frame_2 - 0.072 13.1 0.5 0.12 12.4 0.1 1.6 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B12 subunit family Dickkopf_N PF04706.12 NODE_59465_length_279_cov_64.020492_g51525_i0reverse_frame_2 - 0.055 14.0 5.7 0.086 13.3 2.7 2.1 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region DUF3629 PF12302.8 NODE_59464_length_279_cov_64.758197_g51524_i0reverse_frame_2 - 0.034 13.6 0.5 0.038 13.4 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3629) Flagellin_N PF00669.20 NODE_59457_length_279_cov_68.377049_g51517_i0reverse_frame_3 - 0.079 13.1 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region VLPT PF07122.11 NODE_59456_length_279_cov_72.077869_g51516_i0reverse_frame_2 - 0.098 12.4 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 Variable length PCR target protein (VLPT) Tnp_zf-ribbon_2 PF13842.6 NODE_59456_length_279_cov_72.077869_g51516_i0reverse_frame_2 - 0.29 12.0 4.4 7.8 7.4 0.4 2.8 3 0 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon DAN PF03045.15 NODE_59452_length_279_cov_77.286885_g51512_i0reverse_frame_3 - 0.07 13.2 0.2 0.097 12.7 0.2 1.2 1 0 0 1 1 1 0 DAN domain zf-RING_6 PF14835.6 NODE_59451_length_279_cov_79.258197_g51511_i0forward_frame_3 - 0.00019 21.2 0.0 0.00029 20.6 0.0 1.3 1 0 0 1 1 1 1 zf-RING of BARD1-type protein CCSMST1 PF15013.6 NODE_59450_length_279_cov_80.827869_g51510_i0forward_frame_3 - 0.081 13.1 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 CCSMST1 family PPR PF01535.20 NODE_59450_length_279_cov_80.827869_g51510_i0forward_frame_2 - 0.013 15.8 0.5 2.5 8.5 0.1 2.3 2 0 0 2 2 2 0 PPR repeat TTL PF03133.15 NODE_59448_length_279_cov_83.528689_g51508_i0reverse_frame_3 - 3.4e-08 33.0 0.0 3.9e-08 32.8 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_59448_length_279_cov_83.528689_g51508_i0reverse_frame_3 - 9e-06 25.1 0.0 1e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 NODE_59448_length_279_cov_83.528689_g51508_i0reverse_frame_3 - 0.052 12.8 0.0 0.057 12.7 0.0 1.1 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp DUF1490 PF07371.12 NODE_59447_length_279_cov_93.004098_g51507_i0reverse_frame_3 - 0.064 13.4 0.3 0.075 13.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) zf-HC3 PF16827.5 NODE_59447_length_279_cov_93.004098_g51507_i0reverse_frame_2 - 0.0039 17.4 2.0 0.013 15.7 0.2 2.1 1 1 1 2 2 2 1 zinc-finger SpoIISA_toxin PF14171.6 NODE_59442_length_279_cov_112.430328_g51502_i0forward_frame_2 - 0.12 12.0 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system Lenti_VIF_2 PF07401.12 NODE_59438_length_279_cov_117.262295_g51498_i0reverse_frame_3 - 0.14 11.5 0.3 0.17 11.2 0.3 1.1 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein DisA_N PF02457.16 NODE_59436_length_279_cov_122.983607_g51496_i0forward_frame_3 - 0.024 14.2 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 DisA bacterial checkpoint controller nucleotide-binding DUF5475 PF17569.2 NODE_59435_length_279_cov_157.372951_g51495_i0reverse_frame_3 - 0.0025 18.1 0.4 0.0031 17.8 0.4 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5475) 7TM_GPCR_Srh PF10318.9 NODE_59435_length_279_cov_157.372951_g51495_i0reverse_frame_2 - 0.19 10.7 3.9 0.17 10.9 1.8 1.7 1 1 1 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srh CorC_HlyC PF03471.17 NODE_59433_length_279_cov_167.516393_g51493_i0reverse_frame_2 - 0.27 11.3 3.0 0.28 11.2 0.4 1.9 1 1 1 2 2 2 0 Transporter associated domain ASFV_L11L PF05293.11 NODE_59433_length_279_cov_167.516393_g51493_i0forward_frame_3 - 0.04 14.3 6.1 0.04 14.3 6.1 1.5 1 1 0 1 1 1 0 African swine fever virus (ASFV) L11L protein CytB6-F_Fe-S PF08802.10 NODE_59431_length_279_cov_178.504098_g51491_i0reverse_frame_2 - 5.4e-05 23.1 0.3 5.4e-05 23.1 0.3 2.3 2 0 0 2 2 2 1 Cytochrome B6-F complex Fe-S subunit DUF2794 PF10984.8 NODE_59430_length_279_cov_178.655738_g51490_i0forward_frame_2 - 0.057 13.6 0.0 0.063 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2794) DUF3807 PF12720.7 NODE_59429_length_279_cov_197.217213_g51489_i0forward_frame_2 - 0.31 11.3 1.6 0.41 10.9 1.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3807) Ank_2 PF12796.7 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 6.8e-18 65.0 0.2 1.1e-17 64.4 0.2 1.3 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 3.6e-14 52.9 0.7 6.6e-08 32.9 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 3.6e-12 46.1 0.3 0.00074 19.9 0.1 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 6e-12 44.7 0.0 0.00014 22.0 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 NODE_59423_length_279_cov_624.959016_g51483_i0reverse_frame_3 - 1.4e-11 44.4 0.6 0.0014 18.9 0.0 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) tRNA_bind_2 PF13725.6 NODE_59423_length_279_cov_624.959016_g51483_i0forward_frame_2 - 3.1 7.4 3.5 72 3.0 0.2 2.8 3 0 0 3 3 3 0 Possible tRNA binding domain PPR_1 PF12854.7 NODE_59421_length_279_cov_739.745902_g51481_i0reverse_frame_2 - 0.13 12.0 0.1 0.21 11.3 0.1 1.4 1 0 0 1 1 1 0 PPR repeat Chorein_N PF12624.7 NODE_59420_length_279_cov_740.655738_g51480_i0reverse_frame_2 - 6.5e-11 42.4 0.2 7.9e-11 42.1 0.2 1.1 1 0 0 1 1 1 1 N-terminal region of Chorein or VPS13 AbiJ_NTD4 PF18863.1 NODE_59420_length_279_cov_740.655738_g51480_i0reverse_frame_2 - 0.095 13.2 0.1 0.13 12.7 0.1 1.4 1 1 0 1 1 1 0 AbiJ N-terminal domain 4 DUF2066 PF09839.9 NODE_59420_length_279_cov_740.655738_g51480_i0reverse_frame_2 - 0.11 11.9 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2066) CaMBD PF02888.16 NODE_59418_length_279_cov_3409.561475_g51478_i0forward_frame_2 - 0.4 10.9 4.3 0.17 12.1 1.5 1.7 1 1 1 2 2 2 0 Calmodulin binding domain NR_Repeat PF14046.6 ORF99983 - 2.4 8.3 7.5 3.7 7.8 0.2 2.5 3 0 0 3 3 3 0 Nuclear receptor repeat DUF4216 PF13952.6 ORF99961 - 0.14 12.6 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4216) Tail_VII PF17091.5 ORF99125 - 0.12 12.2 0.9 0.24 11.3 0.9 1.5 1 0 0 1 1 1 0 Inovirus G7P protein Pap_E4 PF02711.14 ORF98086 - 0.3 12.1 1.6 0.38 11.7 1.6 1.2 1 0 0 1 1 1 0 E4 protein DUF2684 PF10885.8 ORF9799 - 0.042 14.0 1.6 0.066 13.3 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Patched PF02460.18 ORF97495 - 6e-10 37.9 5.3 6.8e-10 37.7 5.3 1.0 1 0 0 1 1 1 1 Patched family DUF789 PF05623.12 ORF97089 - 0.043 13.5 0.1 0.046 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF789) Pribosyltran_N PF13793.6 ORF97006 - 0.061 13.3 0.1 0.16 11.9 0.0 1.6 2 0 0 2 2 2 0 N-terminal domain of ribose phosphate pyrophosphokinase Cnn_1N PF07989.11 ORF96960 - 0.0032 17.6 2.9 0.0049 17.0 2.9 1.3 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 UPF0242 PF06785.11 ORF96960 - 0.004 17.3 2.3 0.004 17.3 2.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus M16C_assoc PF08367.11 ORF96960 - 0.018 14.2 0.7 0.02 14.0 0.7 1.3 1 0 0 1 1 1 0 Peptidase M16C associated DUF4988 PF16378.5 ORF96960 - 0.091 12.4 1.2 0.12 12.0 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function zf-RING_2 PF13639.6 ORF96907 - 3.7e-14 52.8 7.4 4.8e-14 52.4 7.4 1.1 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF96907 - 1.9e-10 40.3 4.0 3.4e-10 39.5 4.0 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF96907 - 5.4e-10 39.0 6.8 7.4e-10 38.5 6.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF96907 - 3.4e-08 33.7 8.8 1.1e-07 32.0 8.8 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF96907 - 1.7e-07 31.1 5.0 2.2e-07 30.7 5.0 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF96907 - 4.9e-07 29.5 6.1 7e-07 29.0 6.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF96907 - 5e-07 29.6 4.5 7.9e-07 29.0 4.5 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF96907 - 2.7e-06 27.1 4.1 3.7e-06 26.7 4.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF96907 - 1.1e-05 25.0 2.7 1.5e-05 24.5 2.7 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF96907 - 2.2e-05 24.5 6.1 0.0016 18.6 6.1 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF96907 - 0.00013 21.8 6.3 0.00026 20.8 6.0 1.6 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF96907 - 0.00021 21.3 4.7 0.00047 20.2 4.7 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF96907 - 0.00039 20.3 4.1 0.0041 17.0 4.4 1.9 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 PHD PF00628.29 ORF96907 - 0.00093 19.0 3.9 0.0015 18.4 3.9 1.4 1 0 0 1 1 1 1 PHD-finger zf-RING-like PF08746.11 ORF96907 - 0.0025 18.1 4.5 0.0042 17.3 4.5 1.4 1 0 0 1 1 1 1 RING-like domain zf-RING_4 PF14570.6 ORF96907 - 0.0028 17.4 3.0 0.0042 16.9 3.0 1.3 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain C1_1 PF00130.22 ORF96907 - 0.014 15.3 4.6 0.066 13.1 2.1 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) RINGv PF12906.7 ORF96907 - 0.034 14.3 6.6 0.052 13.7 6.6 1.3 1 0 0 1 1 1 0 RING-variant domain zf-RING_9 PF13901.6 ORF96907 - 0.064 13.2 2.9 0.085 12.8 2.9 1.2 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zf-C3HC4_4 PF15227.6 ORF96907 - 0.12 12.6 3.0 0.39 10.9 3.0 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING DZR PF12773.7 ORF96907 - 0.15 12.1 3.2 0.74 9.9 3.2 2.0 1 1 0 1 1 1 0 Double zinc ribbon zf-RING_10 PF16685.5 ORF96907 - 0.19 11.9 4.6 0.28 11.3 4.6 1.3 1 1 0 1 1 1 0 zinc RING finger of MSL2 Zf_RING PF16744.5 ORF96907 - 0.23 11.6 3.7 0.33 11.1 3.7 1.5 1 1 0 1 1 1 0 KIAA1045 RING finger DiS_P_DiS PF06750.13 ORF96907 - 0.25 11.5 3.8 3 8.0 3.8 2.0 1 1 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain zf-C3H2C3 PF17122.5 ORF96907 - 1.5 9.0 9.5 0.28 11.2 4.8 2.1 2 1 0 2 2 2 0 Zinc-finger CybS PF05328.12 ORF95788 - 0.06 13.0 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit CnrY PF17524.2 ORF95765 - 0.036 14.3 3.1 4.7 7.5 1.4 2.1 2 0 0 2 2 2 0 Anti-sigma factor CnrY CytochromB561_N PF09786.9 ORF95267 - 0.077 12.0 3.7 0.082 11.9 3.7 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal Diphtheria_T PF02764.14 ORF9492 - 0.04 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Diphtheria toxin, T domain T4SS_CagC PF16943.5 ORF94643 - 0.019 15.1 0.5 0.97 9.6 0.1 2.1 1 1 1 2 2 2 0 Cag pathogenicity island, type IV secretory system DUF1523 PF07509.11 ORF94643 - 0.087 12.2 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1523) MadM PF03818.13 ORF94643 - 2.9 7.9 6.4 1.3 9.0 0.3 2.5 2 1 1 3 3 3 0 Malonate/sodium symporter MadM subunit MFS_1_like PF12832.7 ORF94350 - 0.32 9.8 6.7 0.34 9.7 6.7 1.1 1 0 0 1 1 1 0 MFS_1 like family DUF2737 PF10930.8 ORF93473 - 0.0091 15.6 0.7 0.016 14.8 0.7 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2737) DUF4940 PF16298.5 ORF90880 - 0.00097 18.9 0.3 0.001 18.8 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4940) zf-nanos PF05741.13 ORF90859 - 0.049 13.9 0.3 0.11 12.8 0.3 1.5 1 0 0 1 1 1 0 Nanos RNA binding domain Rubi_NSP_C PF12601.8 ORF90294 - 0.035 14.2 1.9 0.08 13.1 1.9 1.6 1 0 0 1 1 1 0 Rubivirus non-structural protein DUF2684 PF10885.8 ORF89496 - 0.042 14.0 1.6 0.066 13.3 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) AgrD PF05931.11 ORF88659 - 0.056 13.5 1.2 0.056 13.5 1.2 1.7 2 0 0 2 2 2 0 Staphylococcal AgrD protein Herpes_U26 PF07402.11 ORF87778 - 0.028 14.0 8.5 0.032 13.8 8.5 1.1 1 0 0 1 1 1 0 Human herpesvirus U26 protein TACI-CRD2 PF09305.10 ORF8770 - 0.017 15.1 0.3 0.017 15.1 0.3 1.8 2 0 0 2 2 2 0 TACI, cysteine-rich domain Prok-E2_C PF14459.6 ORF86800 - 0.052 13.7 2.8 0.082 13.1 2.8 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family C UCH PF00443.29 ORF86469 - 2.2e-15 56.9 3.4 2.5e-15 56.7 3.4 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF86469 - 7e-06 25.8 0.3 7.6e-06 25.7 0.3 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase RSN1_7TM PF02714.15 ORF86232 - 0.028 13.8 3.5 0.031 13.6 3.5 1.1 1 0 0 1 1 1 0 Calcium-dependent channel, 7TM region, putative phosphate Toxin_19 PF08088.12 ORF86132 - 3 8.0 5.8 9 6.5 0.5 2.9 3 0 0 3 3 3 0 Conotoxin I-superfamily BtrH_N PF14399.6 ORF85492 - 0.0092 16.2 0.0 0.011 16.0 0.0 1.1 1 0 0 1 1 1 1 Butirosin biosynthesis protein H, N-terminal AgrD PF05931.11 ORF85394 - 0.056 13.5 1.2 0.056 13.5 1.2 1.7 2 0 0 2 2 2 0 Staphylococcal AgrD protein FANCI_S4 PF14678.6 ORF85043 - 0.0077 15.4 2.3 0.0092 15.1 2.3 1.1 1 0 0 1 1 1 1 FANCI solenoid 4 Tom7 PF08038.12 ORF84811 - 0.0096 15.6 0.0 0.023 14.3 0.0 1.7 1 0 0 1 1 1 1 TOM7 family Phi-29_GP4 PF05464.11 ORF84480 - 0.079 13.2 0.0 0.086 13.1 0.0 1.1 1 0 0 1 1 1 0 Phi-29-like late genes activator (early protein GP4) DUF4640 PF15480.6 ORF84480 - 0.2 11.4 1.1 0.34 10.6 0.8 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4640) DUF3678 PF12435.8 ORF84122 - 0.02 14.3 1.2 0.65 9.4 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) DUF5053 PF16476.5 ORF84119 - 0.025 14.3 0.1 0.037 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5053) DAHP_snth_FXD PF18152.1 ORF84059 - 0.032 14.1 0.1 0.052 13.4 0.1 1.4 1 0 0 1 1 1 0 DAHP synthase ferredoxin-like domain CLIP1_ZNF PF16641.5 ORF83326 - 0.47 10.4 0.1 0.47 10.4 0.1 2.6 2 1 0 2 2 2 0 CLIP1 zinc knuckle ETM PF17577.2 ORF83290 - 0.054 14.1 0.2 0.059 13.9 0.2 1.3 1 0 0 1 1 1 0 ECORI-T site IL3 PF02059.15 ORF83290 - 0.16 12.0 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Interleukin-3 Pox_E10 PF04805.12 ORF83290 - 0.16 11.8 0.2 0.16 11.8 0.2 1.7 2 0 0 2 2 2 0 E10-like protein conserved region Gal-bind_lectin PF00337.22 ORF83150 - 0.098 12.2 0.1 0.13 11.8 0.0 1.2 1 1 0 1 1 1 0 Galactoside-binding lectin PTS_IIB PF02302.17 ORF82921 - 2.2e-12 47.5 0.2 2.4e-12 47.4 0.2 1.2 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit Staphostatin_B PF09023.10 ORF82530 - 0.1 12.7 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Staphostatin B T4SS_CagC PF16943.5 ORF8229 - 0.019 15.1 0.5 0.97 9.6 0.1 2.1 1 1 1 2 2 2 0 Cag pathogenicity island, type IV secretory system DUF1523 PF07509.11 ORF8229 - 0.087 12.2 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1523) MadM PF03818.13 ORF8229 - 2.9 7.9 6.4 1.3 9.0 0.3 2.5 2 1 1 3 3 3 0 Malonate/sodium symporter MadM subunit DDE_Tnp_IS1 PF03400.13 ORF81943 - 0.061 13.7 0.0 0.078 13.3 0.0 1.3 1 1 0 1 1 1 0 IS1 transposase DUF4490 PF14892.6 ORF81316 - 0.035 14.2 0.1 0.059 13.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4490) FANCI_S3 PF14677.6 ORF809 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 SLM4 PF16818.5 ORF80457 - 0.078 12.9 0.3 0.089 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein SLM4 AChE_tetra PF08674.10 ORF80442 - 0.072 12.8 0.1 0.15 11.8 0.1 1.5 1 0 0 1 1 1 0 Acetylcholinesterase tetramerisation domain zf-RING-like PF08746.11 ORF80056 - 1.9 8.9 12.0 5.5 7.4 5.5 2.2 1 1 1 2 2 2 0 RING-like domain IncF PF17626.2 ORF79683 - 0.067 13.6 1.8 0.08 13.3 1.8 1.2 1 0 0 1 1 1 0 Inclusion membrane protein F Diphtheria_T PF02764.14 ORF79645 - 0.04 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Diphtheria toxin, T domain BRI3BP PF14965.6 ORF79251 - 0.66 9.5 6.6 0.82 9.2 6.6 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 Glyco_transf_20 PF00982.21 ORF79244 - 0.18 10.4 0.0 0.22 10.1 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 Eapp_C PF10238.9 ORF79173 - 1.6 8.8 5.3 2.3 8.3 5.3 1.5 1 1 0 1 1 1 0 E2F-associated phosphoprotein Dzip-like_N PF13815.6 ORF78923 - 0.022 14.7 0.7 0.03 14.3 0.7 1.2 1 0 0 1 1 1 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal GCP_C_terminal PF04130.13 ORF78923 - 0.072 12.5 0.7 0.077 12.4 0.7 1.0 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal Dioxygenase_C PF00775.21 ORF78857 - 0.17 11.3 0.1 0.17 11.3 0.1 1.1 1 0 0 1 1 1 0 Dioxygenase AgrD PF05931.11 ORF78744 - 0.056 13.5 1.2 0.056 13.5 1.2 1.7 2 0 0 2 2 2 0 Staphylococcal AgrD protein Dpy-30 PF05186.13 ORF78075 - 6.1e-18 64.2 0.5 9e-18 63.7 0.5 1.3 1 0 0 1 1 1 1 Dpy-30 motif Ufm1 PF03671.14 ORF777 - 0.14 12.2 0.1 0.19 11.9 0.1 1.4 1 1 0 1 1 1 0 Ubiquitin fold modifier 1 protein TNFR_c6 PF00020.18 ORF77547 - 0.012 16.0 3.7 0.022 15.2 3.7 1.4 1 0 0 1 1 1 0 TNFR/NGFR cysteine-rich region NUMOD1 PF07453.13 ORF7722 - 1.6 9.1 5.6 0.28 11.5 0.7 2.1 2 0 0 2 2 2 0 NUMOD1 domain YfmQ PF10787.9 ORF77182 - 0.066 13.0 0.0 0.074 12.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein from bacillus cereus group CDRN PF05174.12 ORF76814 - 0.14 11.9 0.5 0.43 10.3 0.1 1.8 2 0 0 2 2 2 0 Cysteine-rich D. radiodurans N terminus FANCI_S3 PF14677.6 ORF75602 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 Keratin_assoc PF09775.9 ORF75519 - 0.0066 16.1 0.5 0.0077 15.9 0.5 1.1 1 0 0 1 1 1 1 Keratinocyte-associated protein 2 Creatininase PF02633.14 ORF75157 - 0.073 12.5 0.0 0.08 12.4 0.0 1.1 1 0 0 1 1 1 0 Creatinine amidohydrolase Ribonuclease_3 PF00636.26 ORF74811 - 7.5e-05 23.3 0.0 8.6e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease III domain Ribonucleas_3_3 PF14622.6 ORF74811 - 0.0032 17.6 0.0 0.004 17.3 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease-III-like DUF5534 PF17686.1 ORF74713 - 0.0012 19.2 0.0 0.0013 19.0 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5534) Cytomega_TRL10 PF06084.11 ORF74713 - 0.0043 17.1 0.1 0.0049 16.9 0.1 1.1 1 0 0 1 1 1 1 Cytomegalovirus TRL10 protein DUF443 PF04276.12 ORF74713 - 0.0045 16.8 0.1 0.0052 16.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF443) SKG6 PF08693.10 ORF74713 - 0.074 12.5 2.2 0.14 11.6 2.2 1.5 1 0 0 1 1 1 0 Transmembrane alpha-helix domain HMMR_N PF15905.5 ORF74238 - 0.005 16.3 4.2 0.0055 16.2 4.2 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Tropomyosin_1 PF12718.7 ORF74238 - 0.063 13.4 5.0 0.082 13.1 5.0 1.2 1 0 0 1 1 1 0 Tropomyosin like FAM76 PF16046.5 ORF74238 - 0.17 11.2 2.6 0.18 11.2 2.6 1.0 1 0 0 1 1 1 0 FAM76 protein YgaB PF14182.6 ORF74238 - 0.29 11.6 3.0 1.6 9.2 0.2 2.3 1 1 1 2 2 2 0 YgaB-like protein BTB PF00651.31 ORF74145 - 4.6e-09 36.5 0.1 5.4e-09 36.3 0.1 1.1 1 0 0 1 1 1 1 BTB/POZ domain DUF3678 PF12435.8 ORF73580 - 0.035 13.5 1.4 2.3 7.6 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) RVP_2 PF08284.11 ORF72311 - 0.061 13.1 0.0 0.069 12.9 0.0 1.1 1 0 0 1 1 1 0 Retroviral aspartyl protease Colipase PF01114.18 ORF71981 - 0.028 14.1 2.1 0.059 13.1 2.1 1.5 1 0 0 1 1 1 0 Colipase, N-terminal domain DUF2721 PF11026.8 ORF71803 - 0.25 11.2 3.7 0.46 10.4 3.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) Adipogenin PF15202.6 ORF71803 - 4 7.5 6.3 1.8 8.6 2.9 1.9 1 1 1 2 2 2 0 Adipogenin BDM PF10684.9 ORF71602 - 5.2e-52 174.1 0.5 6.3e-52 173.8 0.5 1.1 1 0 0 1 1 1 1 Putative biofilm-dependent modulation protein YmgB PF10798.8 ORF71602 - 0.0014 18.4 0.0 0.0021 17.9 0.0 1.2 1 0 0 1 1 1 1 Biofilm development protein YmgB/AriR Defensin_3 PF08131.11 ORF70632 - 0.002 18.3 0.1 0.0032 17.6 0.1 1.3 1 0 0 1 1 1 1 Defensin-like peptide family DMSP_lyase PF16867.5 ORF7059 - 0.14 11.8 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Dimethlysulfonioproprionate lyase RPN7 PF10602.9 ORF7003 - 0.14 11.9 0.5 0.31 10.7 0.2 1.6 2 0 0 2 2 2 0 26S proteasome subunit RPN7 NYN_YacP PF05991.11 ORF69981 - 0.032 14.2 0.1 0.036 14.0 0.1 1.3 1 1 0 1 1 1 0 YacP-like NYN domain Virul_fac_BrkB PF03631.15 ORF68848 - 0.38 10.3 6.7 0.45 10.1 6.7 1.0 1 0 0 1 1 1 0 Virulence factor BrkB ABC2_membrane_3 PF12698.7 ORF68848 - 7.8 5.5 13.7 8.5 5.4 13.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein PTPS PF01242.19 ORF67501 - 0.11 12.5 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase MRAP PF15183.6 ORF66997 - 0.0024 17.8 0.1 0.0032 17.4 0.1 1.2 1 0 0 1 1 1 1 Melanocortin-2 receptor accessory protein family DUF2207 PF09972.9 ORF66997 - 0.0031 16.3 0.2 0.0032 16.3 0.2 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF4138 PF13595.6 ORF66997 - 0.005 16.1 0.5 0.0053 16.1 0.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4138) TMEM107 PF14995.6 ORF66997 - 0.0064 16.9 0.0 0.0068 16.8 0.0 1.1 1 0 0 1 1 1 1 Transmembrane protein AnmK PF03702.14 ORF66997 - 0.007 15.5 0.0 0.0079 15.3 0.0 1.0 1 0 0 1 1 1 1 Anhydro-N-acetylmuramic acid kinase T2SSF PF00482.23 ORF66997 - 0.032 14.2 0.5 0.045 13.7 0.5 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F AgrB PF04647.15 ORF66997 - 0.033 13.5 2.7 0.044 13.1 2.7 1.2 1 0 0 1 1 1 0 Accessory gene regulator B SID-1_RNA_chan PF13965.6 ORF66997 - 0.036 12.5 0.8 0.038 12.4 0.8 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 PEN-2 PF10251.9 ORF66997 - 0.056 13.9 0.2 0.079 13.4 0.2 1.2 1 0 0 1 1 1 0 Presenilin enhancer-2 subunit of gamma secretase Orf78 PF06024.12 ORF66997 - 0.066 13.5 0.5 0.075 13.3 0.5 1.3 1 1 0 1 1 1 0 Orf78 (ac78) Spore_III_AB PF09548.10 ORF66997 - 0.081 13.0 2.7 0.11 12.6 2.7 1.3 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) Mid2 PF04478.12 ORF66997 - 0.1 12.4 0.2 0.15 11.9 0.2 1.3 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor DUF2262 PF10020.9 ORF66997 - 0.15 12.4 3.1 0.18 12.2 3.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) DUF3899 PF13038.6 ORF66997 - 0.28 11.7 2.8 0.92 10.1 2.8 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3899) DUF2116 PF09889.9 ORF66997 - 0.35 10.9 4.2 0.47 10.5 3.7 1.6 1 1 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) RAMP4 PF06624.12 ORF66997 - 0.64 10.1 3.9 4.9 7.3 1.7 2.1 1 1 1 2 2 2 0 Ribosome associated membrane protein RAMP4 DUF2401 PF10287.9 ORF66577 - 0.025 14.2 0.0 0.03 13.9 0.0 1.0 1 0 0 1 1 1 0 Putative TOS1-like glycosyl hydrolase (DUF2401) DUF3325 PF11804.8 ORF66318 - 0.0062 16.7 0.3 0.0089 16.2 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3325) zf-tcix PF14952.6 ORF65914 - 0.035 13.7 0.2 0.063 12.9 0.2 1.5 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding Transposase_24 PF03004.14 ORF65745 - 0.0025 17.9 0.3 0.0025 17.9 0.3 1.1 1 0 0 1 1 1 1 Plant transposase (Ptta/En/Spm family) RCC1_2 PF13540.6 ORF65692 - 9.4e-06 25.3 0.1 0.15 11.9 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Catalase_C PF18011.1 ORF65692 - 0.018 14.7 0.8 0.043 13.5 0.6 1.6 1 1 1 2 2 2 0 C-terminal domain found in long catalases DUF155 PF02582.14 ORF65692 - 0.018 15.1 0.0 4.4 7.4 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PLN_propep PF16485.5 ORF65692 - 0.039 13.7 0.1 0.28 10.9 0.0 2.0 2 0 0 2 2 2 0 Protealysin propeptide Sec66 PF09802.9 ORF65692 - 0.063 12.9 0.0 9.9 5.7 0.0 2.0 2 0 0 2 2 2 0 Preprotein translocase subunit Sec66 PheRS_DBD2 PF18554.1 ORF65692 - 0.12 12.4 9.3 0.81 9.7 1.7 2.5 2 0 0 2 2 2 0 PheRS DNA binding domain 2 RCC1 PF00415.18 ORF65692 - 1.2 9.8 3.4 4.2 8.1 0.2 2.5 2 1 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat Lig_C PF18330.1 ORF64457 - 0.076 13.0 0.0 0.093 12.7 0.0 1.2 1 0 0 1 1 1 0 Ligase Pab1020 C-terminal region Protein_K PF12283.8 ORF64380 - 0.0084 16.3 0.0 0.011 15.9 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage protein K DUF4682 PF15733.5 ORF63540 - 0.13 12.8 0.1 0.16 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4682) DUF4205 PF13898.6 ORF63441 - 0.12 11.3 0.0 0.13 11.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4205) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks291.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks291.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks291.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks291.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- BRE1 PF08647.11 ORF62544 - 6e-08 32.7 8.4 6.5e-08 32.5 8.4 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase DUF724 PF05266.14 ORF62544 - 0.0013 18.5 8.8 0.0017 18.2 8.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF724) HOOK PF05622.12 ORF62544 - 0.0016 16.7 7.5 0.0018 16.5 7.5 1.0 1 0 0 1 1 1 1 HOOK protein KASH_CCD PF14662.6 ORF62544 - 0.0021 17.9 8.9 0.003 17.4 8.9 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DUF2046 PF09755.9 ORF62544 - 0.0021 17.3 6.8 0.0025 17.1 6.8 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) Tropomyosin PF00261.20 ORF62544 - 0.0022 17.4 5.1 0.0027 17.1 5.1 1.0 1 0 0 1 1 1 1 Tropomyosin Tropomyosin_1 PF12718.7 ORF62544 - 0.0034 17.6 7.6 0.0039 17.3 7.6 1.1 1 0 0 1 1 1 1 Tropomyosin like UPF0242 PF06785.11 ORF62544 - 0.0041 17.2 8.0 0.0055 16.8 8.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF4449 PF14613.6 ORF62544 - 0.0043 17.2 4.1 0.0054 16.9 4.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4449) DMPK_coil PF08826.10 ORF62544 - 0.0044 17.1 8.8 0.045 13.9 2.8 2.2 1 1 1 2 2 2 1 DMPK coiled coil domain like ATG16 PF08614.11 ORF62544 - 0.0093 16.2 5.1 0.011 16.0 5.1 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) Spc7 PF08317.11 ORF62544 - 0.014 14.3 7.2 0.016 14.1 7.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein KIX_2 PF16987.5 ORF62544 - 0.014 15.3 1.8 0.026 14.5 1.6 1.7 1 1 0 1 1 1 0 KIX domain TMPIT PF07851.13 ORF62544 - 0.015 14.5 7.3 0.016 14.4 7.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF4795 PF16043.5 ORF62544 - 0.016 14.9 6.0 0.019 14.6 6.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF3450 PF11932.8 ORF62544 - 0.026 13.8 4.9 0.031 13.6 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4264 PF14084.6 ORF62544 - 0.031 13.9 0.4 0.044 13.4 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4264) DUF4407 PF14362.6 ORF62544 - 0.032 13.6 2.1 0.036 13.4 2.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spc24 PF08286.11 ORF62544 - 0.035 14.4 7.6 0.039 14.2 5.1 1.9 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 RasGAP_C PF03836.15 ORF62544 - 0.035 14.2 6.7 0.042 14.0 6.7 1.1 1 0 0 1 1 1 0 RasGAP C-terminus Cob_adeno_trans PF01923.18 ORF62544 - 0.047 13.8 0.9 0.052 13.7 0.9 1.2 1 0 0 1 1 1 0 Cobalamin adenosyltransferase Laminin_II PF06009.12 ORF62544 - 0.061 13.3 7.4 0.15 12.1 6.8 1.7 1 1 1 2 2 2 0 Laminin Domain II DUF4337 PF14235.6 ORF62544 - 0.11 12.6 1.8 0.13 12.3 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) TMF_DNA_bd PF12329.8 ORF62544 - 0.12 12.4 10.5 0.22 11.5 2.2 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding LMBR1 PF04791.16 ORF62544 - 0.12 11.2 4.5 0.12 11.2 4.5 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein HemX PF04375.14 ORF62544 - 0.17 11.1 5.4 0.2 10.9 5.4 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Nup54 PF13874.6 ORF62544 - 0.18 11.9 4.3 1.5 8.9 3.3 1.9 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 DUF745 PF05335.13 ORF62544 - 0.21 11.3 3.7 0.26 11.0 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF745) ABC_tran_CTD PF16326.5 ORF62544 - 0.21 11.9 5.3 0.35 11.1 3.1 2.1 1 1 1 2 2 2 0 ABC transporter C-terminal domain FlxA PF14282.6 ORF62544 - 0.3 11.1 13.2 0.14 12.2 7.9 2.0 1 1 1 2 2 2 0 FlxA-like protein SlyX PF04102.12 ORF62544 - 0.36 11.5 5.8 1.1 9.9 4.5 2.1 1 1 1 2 2 2 0 SlyX CENP-H PF05837.12 ORF62544 - 0.58 10.6 8.8 1 9.8 8.8 1.4 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DivIC PF04977.15 ORF62544 - 1.5 8.7 10.1 5.3 6.9 4.0 2.1 1 1 1 2 2 2 0 Septum formation initiator DUF1664 PF07889.12 ORF62544 - 1.5 8.9 7.0 4.8 7.2 7.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Fzo_mitofusin PF04799.13 ORF62544 - 1.8 8.1 6.6 2 7.9 6.6 1.1 1 0 0 1 1 1 0 fzo-like conserved region JIP_LZII PF16471.5 ORF62544 - 3.2 8.0 9.8 6.6 7.0 0.9 2.2 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II FlaC_arch PF05377.11 ORF62544 - 3.5 8.1 10.8 1.8 9.0 3.3 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Lge1 PF11488.8 ORF62544 - 3.6 7.8 11.9 5.4 7.3 5.2 2.1 1 1 1 2 2 2 0 Transcriptional regulatory protein LGE1 Nudix_N_2 PF14803.6 ORF61252 - 0.44 10.5 2.6 0.89 9.5 0.1 2.6 2 1 0 2 2 2 0 Nudix N-terminal PIG-P PF08510.12 ORF60672 - 0.048 13.6 3.0 0.064 13.2 3.0 1.2 1 0 0 1 1 1 0 PIG-P NB PF04159.13 ORF60672 - 0.075 13.1 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 NB glycoprotein HWE_HK PF07536.14 ORF60430 - 0.11 13.2 0.0 0.14 12.9 0.0 1.2 1 0 0 1 1 1 0 HWE histidine kinase FANCI_S3 PF14677.6 ORF60307 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 CCAP PF11105.8 ORF60087 - 0.21 11.5 0.9 0.29 11.1 0.9 1.3 1 1 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a FGFR3_TM PF18123.1 ORF60025 - 5.2 6.7 12.0 1.5 8.4 2.4 2.5 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain YhfT PF10797.9 ORF59102 - 0.2 10.6 0.1 0.24 10.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF3254 PF11630.8 ORF59016 - 0.076 13.2 0.0 0.085 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3254) RVP_2 PF08284.11 ORF58501 - 0.061 13.1 0.0 0.069 12.9 0.0 1.1 1 0 0 1 1 1 0 Retroviral aspartyl protease Ribosomal_L16 PF00252.18 ORF57164 - 6.2e-15 55.4 0.1 7e-15 55.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e SLM4 PF16818.5 ORF55639 - 0.078 12.9 0.3 0.089 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein SLM4 Gaa1 PF04114.14 ORF54754 - 0.031 13.3 0.5 0.028 13.5 0.5 1.1 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component AHSP PF09236.10 ORF54623 - 0.053 14.0 1.1 0.28 11.6 0.2 2.0 1 1 1 2 2 2 0 Alpha-haemoglobin stabilising protein Aldo_ket_red PF00248.21 ORF53483 - 6.8e-15 55.0 0.1 1.2e-14 54.2 0.1 1.4 1 1 1 2 2 2 1 Aldo/keto reductase family Asparaginase_C PF17763.1 ORF52747 - 1.8e-05 24.9 0.0 2.4e-05 24.5 0.0 1.2 1 1 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain HPP PF04982.13 ORF52747 - 0.043 14.0 2.1 0.048 13.8 2.1 1.0 1 0 0 1 1 1 0 HPP family HTH_Tnp_4 PF13613.6 ORF51627 - 0.28 10.9 0.4 0.28 10.9 0.4 1.7 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease CtsR_C PF17727.1 ORF51061 - 0.083 13.0 0.4 0.11 12.6 0.4 1.2 1 0 0 1 1 1 0 CtsR C-terminal dimerization domain YfmQ PF10787.9 ORF50118 - 0.066 13.0 0.0 0.074 12.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein from bacillus cereus group DUF1752 PF08550.10 ORF49620 - 0.013 15.3 0.1 0.027 14.3 0.1 1.5 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1752) SLM4 PF16818.5 ORF48207 - 0.078 12.9 0.3 0.089 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein SLM4 Peptidase_U49 PF10463.9 ORF47944 - 0.04 13.7 0.2 0.046 13.5 0.2 1.0 1 0 0 1 1 1 0 Peptidase U49 ICL PF00463.21 ORF47844 - 6.6e-18 64.5 1.8 7.2e-18 64.4 1.8 1.0 1 0 0 1 1 1 1 Isocitrate lyase family ETC_C1_NDUFA4 PF04800.12 ORF47844 - 0.09 13.0 0.4 0.12 12.7 0.4 1.2 1 0 0 1 1 1 0 ETC complex I subunit conserved region zf-RING-like PF08746.11 ORF46430 - 1.9 8.9 12.0 5.5 7.4 5.5 2.2 1 1 1 2 2 2 0 RING-like domain Spo7_2_N PF15407.6 ORF46267 - 0.21 11.2 0.0 0.77 9.4 0.0 1.8 2 0 0 2 2 2 0 Sporulation protein family 7 Sushi_2 PF09014.10 ORF45979 - 0.046 13.6 0.0 0.055 13.4 0.0 1.3 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain PQ-loop PF04193.14 ORF45848 - 2.6e-08 33.5 7.8 4e-08 32.9 7.8 1.3 1 0 0 1 1 1 1 PQ loop repeat OapA_N PF08525.11 ORF45827 - 7.4 6.6 8.4 7.4 6.6 2.1 2.5 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif Las1 PF04031.13 ORF45015 - 0.12 12.4 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Las1-like FANCI_S3 PF14677.6 ORF44979 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 Pkinase PF00069.25 ORF44929 - 0.0003 20.3 0.0 0.0003 20.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain MANEC PF07502.14 ORF44088 - 1.1 9.6 12.7 0.31 11.4 2.0 2.2 1 1 1 2 2 2 0 MANEC domain FANCI_S3 PF14677.6 ORF43447 - 0.074 12.8 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 Glyco_transf_34 PF05637.12 ORF43070 - 0.00082 19.2 0.0 0.00094 19.0 0.0 1.1 1 0 0 1 1 1 1 galactosyl transferase GMA12/MNN10 family Arteri_Gl PF00951.18 ORF41728 - 0.073 12.9 2.3 0.081 12.7 2.3 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein Hydrolase_like PF13242.6 ORF40904 - 4.3e-06 26.7 0.0 5.7e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 ORF40904 - 1.3e-05 25.3 0.0 1.6e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF40904 - 0.0017 18.7 0.1 0.0022 18.3 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Sec66 PF09802.9 ORF40904 - 0.017 14.7 0.0 0.019 14.5 0.0 1.0 1 0 0 1 1 1 0 Preprotein translocase subunit Sec66 zf_C2H2_6 PF18450.1 ORF40737 - 2.2 8.1 4.3 3.5 7.4 4.3 1.2 1 0 0 1 1 1 0 Zinc Finger domain DUF924 PF06041.11 ORF40725 - 4.4e-27 95.4 0.5 4.8e-27 95.3 0.5 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) Spore_YpjB PF09577.10 ORF40725 - 0.11 12.3 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Sporulation protein YpjB (SpoYpjB) U83 PF17465.2 ORF40671 - 0.0035 17.4 0.3 0.005 16.9 0.2 1.4 1 1 0 1 1 1 1 Chemokine-like protein, HHV-6 U83 gene product Cnd1 PF12717.7 ORF4015 - 0.036 14.1 0.1 0.041 13.9 0.1 1.1 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 DAHP_synth_1 PF00793.20 ORF39264 - 1.4e-07 30.7 0.0 1.7e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 DAHP synthetase I family DUF1589 PF07628.11 ORF39264 - 0.085 13.0 0.0 0.093 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1589) Staphostatin_B PF09023.10 ORF38392 - 0.1 12.7 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Staphostatin B FKBP_C PF00254.28 ORF37675 - 0.0068 16.7 0.0 0.009 16.3 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Gpr1_Fun34_YaaH PF01184.19 ORF3702 - 0.14 11.8 4.5 0.17 11.5 4.5 1.1 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family Thyroglobulin_1 PF00086.18 ORF36298 - 0.0015 18.1 1.4 0.0019 17.8 1.4 1.2 1 0 0 1 1 1 1 Thyroglobulin type-1 repeat SLM4 PF16818.5 ORF35415 - 0.078 12.9 0.3 0.089 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein SLM4 CCDC142 PF14923.6 ORF34922 - 0.018 13.8 0.1 0.019 13.8 0.1 1.0 1 0 0 1 1 1 0 Coiled-coil protein 142 CCDC32 PF14989.6 ORF34922 - 0.035 14.1 0.1 0.039 14.0 0.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain containing 32 Cyc-maltodext_C PF10438.9 ORF34922 - 0.082 13.0 0.4 0.11 12.7 0.4 1.2 1 0 0 1 1 1 0 Cyclo-malto-dextrinase C-terminal domain Ras PF00071.22 ORF34693 - 5.5e-11 42.3 0.1 6.1e-11 42.2 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF34693 - 2.1e-05 24.7 0.2 3.6e-05 24.0 0.2 1.4 1 1 1 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase TIG_2 PF18020.1 ORF3446 - 0.12 13.1 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 TIG domain found in plexin zf-TRAF PF02176.18 ORF3367 - 0.018 15.7 2.2 0.028 15.1 2.2 1.3 1 0 0 1 1 1 0 TRAF-type zinc finger ProSAAS PF07259.12 ORF3346 - 0.29 11.1 5.3 0.32 10.9 5.3 1.1 1 0 0 1 1 1 0 ProSAAS precursor zf-C2H2_8 PF15909.5 ORF3342 - 0.081 13.2 3.5 0.096 13.0 3.5 1.2 1 0 0 1 1 1 0 C2H2-type zinc ribbon Vps36_ESCRT-II PF11605.8 ORF33326 - 0.17 12.1 0.1 0.21 11.8 0.1 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting protein 36 Vps36 Cyclin_C PF02984.19 ORF33029 - 1.8e-21 76.4 0.3 2e-21 76.3 0.3 1.0 1 0 0 1 1 1 1 Cyclin, C-terminal domain MgrB PF13998.6 ORF32818 - 0.027 14.3 0.0 0.064 13.1 0.0 1.6 1 0 0 1 1 1 0 MgrB protein TMEM154 PF15102.6 ORF31144 - 0.071 13.0 0.3 0.081 12.8 0.3 1.1 1 0 0 1 1 1 0 TMEM154 protein family GSu_C4xC__C2xCH PF09698.10 ORF30769 - 0.31 11.9 0.5 0.31 11.9 0.5 2.2 2 0 0 2 2 2 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) RecA_dep_nuc PF16786.5 ORF30750 - 0.11 12.6 0.2 0.14 12.3 0.2 1.2 1 0 0 1 1 1 0 Recombination enhancement, RecA-dependent nuclease Zn_Tnp_IS1 PF03811.13 ORF30700 - 2.7 7.8 10.8 1.2 8.9 2.7 3.0 1 1 2 3 3 3 0 InsA N-terminal domain MAAL_C PF07476.11 ORF30365 - 0.057 12.6 0.2 0.14 11.3 0.1 1.5 1 1 1 2 2 2 0 Methylaspartate ammonia-lyase C-terminus Plasmodium_HRP PF05403.11 ORF30346 - 0.011 15.6 2.4 0.012 15.4 2.4 1.0 1 0 0 1 1 1 0 Plasmodium histidine-rich protein (HRPII/III) LAGLIDADG_WhiA PF14527.6 ORF30346 - 8.8 6.5 9.9 12 6.0 1.5 2.2 1 1 0 2 2 2 0 WhiA LAGLIDADG-like domain DUF4375 PF14300.6 ORF30346 - 9.8 6.5 7.1 33 4.8 5.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4375) Sulfatase PF00884.23 ORF29657 - 0.0063 16.0 0.0 0.0079 15.6 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Cnn_1N PF07989.11 ORF29617 - 0.0032 17.6 2.9 0.0049 17.0 2.9 1.3 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 UPF0242 PF06785.11 ORF29617 - 0.004 17.3 2.3 0.004 17.3 2.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus M16C_assoc PF08367.11 ORF29617 - 0.018 14.2 0.7 0.02 14.0 0.7 1.3 1 0 0 1 1 1 0 Peptidase M16C associated DUF4988 PF16378.5 ORF29617 - 0.091 12.4 1.2 0.12 12.0 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function Tab2_like PF06485.11 ORF29567 - 0.0018 17.8 0.0 0.0018 17.8 0.0 1.0 1 0 0 1 1 1 1 RNA-binding protein Tab2/Atab2 Mu-transpos_C PF09299.11 ORF28680 - 0.082 12.9 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Mu transposase, C-terminal Neur_chan_memb PF02932.16 ORF28583 - 0.22 11.5 2.9 0.27 11.3 2.9 1.0 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region FAM163 PF15069.6 ORF28583 - 4.2 7.8 7.1 4.8 7.6 7.1 1.2 1 0 0 1 1 1 0 FAM163 family RTX PF02382.15 ORF28387 - 0.0048 16.6 0.9 0.0054 16.4 0.9 1.1 1 0 0 1 1 1 1 N-terminal domain in RTX protein TcdA_TcdB_pore PF12920.7 ORF28387 - 0.13 10.5 0.8 0.14 10.3 0.8 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain Phage_holin_2_3 PF16080.5 ORF28387 - 0.24 11.2 5.3 0.48 10.2 5.3 1.6 1 1 0 1 1 1 0 Bacteriophage holin family HP1 FYVE PF01363.21 ORF28196 - 1 9.6 6.9 33 4.7 6.9 2.1 1 1 0 1 1 1 0 FYVE zinc finger Tsp45I PF06300.12 ORF26899 - 0.12 11.9 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Tsp45I type II restriction enzyme YgbB PF02542.16 ORF2604 - 0.087 13.1 0.3 0.1 12.9 0.3 1.0 1 0 0 1 1 1 0 YgbB family PAN_4 PF14295.6 ORF25149 - 0.0083 16.0 3.5 0.2 11.6 0.4 2.4 1 1 1 2 2 2 2 PAN domain DUF2484 PF10658.9 ORF25006 - 0.033 14.5 0.4 0.083 13.2 0.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2484) DC_STAMP PF07782.13 ORF24656 - 0.03 14.1 0.2 0.04 13.8 0.2 1.2 1 0 0 1 1 1 0 DC-STAMP-like protein DUF1929 PF09118.11 ORF24263 - 0.085 13.2 0.1 0.1 12.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1929) Pilin_PilX PF11530.8 ORF23416 - 0.029 14.3 0.1 0.03 14.2 0.1 1.1 1 0 0 1 1 1 0 Minor type IV pilin, PilX DUF3139 PF11337.8 ORF2312 - 0.048 14.3 0.3 0.075 13.7 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) IL12 PF03039.14 ORF2284 - 0.0026 17.1 0.2 0.0031 16.9 0.2 1.1 1 0 0 1 1 1 1 Interleukin-12 alpha subunit Diphtheria_T PF02764.14 ORF21776 - 0.04 14.0 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Diphtheria toxin, T domain Lig_C PF18330.1 ORF21665 - 0.081 12.9 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Ligase Pab1020 C-terminal region Orthopox_F7 PF05813.12 ORF20999 - 0.039 14.1 0.1 0.044 13.9 0.1 1.1 1 0 0 1 1 1 0 Orthopoxvirus F7 protein Transposase_24 PF03004.14 ORF20084 - 0.0025 17.9 0.3 0.0025 17.9 0.3 1.1 1 0 0 1 1 1 1 Plant transposase (Ptta/En/Spm family) DctQ PF04290.12 ORF19936 - 0.05 13.5 1.0 0.061 13.2 1.0 1.2 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component FOXP-CC PF16159.5 ORF19481 - 0.038 14.6 0.3 0.066 13.8 0.2 1.4 1 1 0 1 1 1 0 FOXP coiled-coil domain TetR_C_17 PF17922.1 ORF19481 - 0.062 13.4 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_Tc5 PF03221.16 ORF19481 - 0.098 12.7 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain TetR_C_11 PF16859.5 ORF19481 - 0.14 12.5 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Sec7 PF01369.20 ORF19481 - 0.15 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Sec7 domain CLIP1_ZNF PF16641.5 ORF19205 - 0.47 10.4 0.1 0.47 10.4 0.1 2.6 2 1 0 2 2 2 0 CLIP1 zinc knuckle TUSC2 PF15000.6 ORF18801 - 0.006 16.9 0.0 0.0087 16.3 0.0 1.2 1 0 0 1 1 1 1 Tumour suppressor candidate 2 T2SSE_N PF05157.15 ORF18801 - 0.049 13.9 0.1 0.086 13.1 0.1 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein E, N-terminal domain FUSC PF04632.12 ORF17466 - 0.2 10.2 2.0 0.2 10.2 2.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family PRIMA1 PF16101.5 ORF17456 - 0.99 9.5 2.9 0.42 10.6 1.0 1.4 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 Mem_trans PF03547.18 ORF16716 - 0.024 13.1 3.1 0.029 12.8 3.1 1.0 1 0 0 1 1 1 0 Membrane transport protein Arrestin_N PF00339.29 ORF16716 - 0.22 11.6 2.7 0.22 11.6 1.8 1.4 1 1 0 1 1 1 0 Arrestin (or S-antigen), N-terminal domain Nbas_N PF15492.6 ORF16706 - 0.019 14.3 0.0 0.022 14.1 0.0 1.0 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal HGWP PF03578.15 ORF15554 - 0.14 11.7 0.2 0.25 10.9 0.2 1.4 1 0 0 1 1 1 0 HGWP repeat DUF5053 PF16476.5 ORF152612 - 0.28 10.9 2.5 8.5 6.1 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5053) Ham1p_like PF01725.16 ORF152422 - 1.6e-26 93.4 0.0 1.7e-26 93.3 0.0 1.0 1 0 0 1 1 1 1 Ham1 family SLM4 PF16818.5 ORF151611 - 0.078 12.9 0.3 0.089 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein SLM4 zf-C2HC5 PF06221.13 ORF150736 - 0.01 15.8 1.2 0.01 15.8 1.2 1.8 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type Peripla_BP_3 PF13377.6 ORF15065 - 1.8e-25 90.2 0.0 2e-25 90.1 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF15065 - 1.1e-06 28.3 0.0 1.2e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family DUF1645 PF07816.11 ORF15058 - 0.086 13.4 4.6 0.1 13.2 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1645) Caldesmon PF02029.15 ORF150067 - 0.0072 15.2 2.1 0.0079 15.0 2.1 1.0 1 0 0 1 1 1 1 Caldesmon HTH_Tnp_4 PF13613.6 ORF150005 - 0.28 10.9 0.4 0.28 10.9 0.4 1.7 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease ubiquitin PF00240.23 ORF149232 - 1.4e-11 44.0 0.1 1.7e-11 43.7 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF149232 - 0.0011 18.8 0.1 0.0012 18.6 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like PDEase_I PF00233.19 ORF149177 - 1e-14 54.9 0.4 1.2e-14 54.6 0.4 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Ribophorin_II PF05817.14 ORF147200 - 0.26 9.8 0.6 5.4 5.4 0.2 2.0 2 0 0 2 2 2 0 Oligosaccharyltransferase subunit Ribophorin II SLM4 PF16818.5 ORF146432 - 0.078 12.9 0.3 0.089 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein SLM4 Sporozoite_P67 PF05642.11 ORF146111 - 0.019 13.1 0.3 0.018 13.1 0.3 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF1295 PF06966.12 ORF145330 - 0.0016 18.0 0.4 0.0021 17.6 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Nab2p_Zf1 PF18260.1 ORF144316 - 1.5 8.8 4.4 1.6 8.7 1.5 2.3 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 DUF502 PF04367.13 ORF144089 - 0.079 12.9 0.1 0.21 11.5 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF502) Hep_core_N PF08290.11 ORF144089 - 0.083 12.9 0.3 0.083 12.9 0.3 2.5 3 0 0 3 3 3 0 Hepatitis core protein, putative zinc finger NinB PF05772.12 ORF144003 - 0.0081 16.0 0.9 0.009 15.8 0.9 1.2 1 0 0 1 1 1 1 NinB protein PetG PF02529.15 ORF143512 - 0.08 12.8 0.8 0.14 12.1 0.8 1.4 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit 5 Hema_esterase PF03996.15 ORF14276 - 0.058 13.2 0.6 0.061 13.1 0.6 1.1 1 0 0 1 1 1 0 Hemagglutinin esterase Thioredoxin_8 PF13905.6 ORF142588 - 0.0071 16.6 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like TAXi_C PF14541.6 ORF142457 - 0.0021 17.8 0.0 0.0024 17.7 0.0 1.0 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF142457 - 0.02 14.3 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic aspartyl protease Creatininase PF02633.14 ORF141816 - 0.073 12.5 0.0 0.08 12.4 0.0 1.1 1 0 0 1 1 1 0 Creatinine amidohydrolase T4SS_CagC PF16943.5 ORF141676 - 0.019 15.1 0.5 0.97 9.6 0.1 2.1 1 1 1 2 2 2 0 Cag pathogenicity island, type IV secretory system DUF1523 PF07509.11 ORF141676 - 0.087 12.2 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1523) MadM PF03818.13 ORF141676 - 2.9 7.9 6.4 1.3 9.0 0.3 2.5 2 1 1 3 3 3 0 Malonate/sodium symporter MadM subunit Cnn_1N PF07989.11 ORF140701 - 0.0032 17.6 2.9 0.0049 17.0 2.9 1.3 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 UPF0242 PF06785.11 ORF140701 - 0.004 17.3 2.3 0.004 17.3 2.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus M16C_assoc PF08367.11 ORF140701 - 0.018 14.2 0.7 0.02 14.0 0.7 1.3 1 0 0 1 1 1 0 Peptidase M16C associated DUF4988 PF16378.5 ORF140701 - 0.091 12.4 1.2 0.12 12.0 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function FANCI_S1-cap PF14674.6 ORF140567 - 0.045 13.8 0.1 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 FANCI solenoid 1 cap GNT-I PF03071.15 ORF140432 - 0.12 11.2 0.0 0.14 10.9 0.0 1.0 1 0 0 1 1 1 0 GNT-I family Fes1 PF08609.10 ORF140010 - 0.03 15.2 0.6 0.12 13.2 0.5 1.7 1 1 1 2 2 2 0 Nucleotide exchange factor Fes1 EF1G PF00647.19 ORF140010 - 0.033 14.2 0.3 0.039 14.0 0.3 1.1 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain DUF848 PF05852.11 ORF140010 - 0.044 13.9 0.1 0.05 13.7 0.1 1.2 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) zf-RanBP PF00641.18 ORF140010 - 0.082 12.2 0.7 0.13 11.6 0.7 1.3 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others BEN PF10523.9 ORF139512 - 0.1 12.9 0.1 0.38 11.0 0.0 1.8 1 1 1 2 2 2 0 BEN domain Senescence_reg PF04520.13 ORF138787 - 0.069 14.0 0.0 0.084 13.7 0.0 1.2 1 0 0 1 1 1 0 Senescence regulator DUF3899 PF13038.6 ORF138620 - 0.045 14.3 2.7 0.074 13.6 2.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3899) YjbT PF17089.5 ORF136986 - 1e-65 217.7 0.5 1.1e-65 217.6 0.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family DUF5531 PF17671.1 ORF136935 - 1 9.2 2.9 0.37 10.7 0.6 1.4 2 0 0 2 2 2 0 Family of unknown function (DUF5531) DUF5534 PF17686.1 ORF136749 - 0.0013 19.0 0.0 0.0015 18.8 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5534) DUF443 PF04276.12 ORF136749 - 0.0052 16.6 0.0 0.0056 16.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF443) Cytomega_TRL10 PF06084.11 ORF136749 - 0.021 14.9 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein MFS_2 PF13347.6 ORF136749 - 0.064 11.8 0.0 0.07 11.7 0.0 1.0 1 0 0 1 1 1 0 MFS/sugar transport protein SKG6 PF08693.10 ORF136749 - 0.077 12.4 2.2 0.14 11.6 2.2 1.4 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Chordopox_A35R PF05989.12 ORF135506 - 0.043 13.7 0.3 0.048 13.6 0.3 1.1 1 0 0 1 1 1 0 Chordopoxvirus A35R protein HTH_Tnp_Tc3_2 PF01498.18 ORF134773 - 3.5 7.9 7.8 0.14 12.5 1.1 2.1 2 1 1 3 3 3 0 Transposase Spt4 PF06093.13 ORF134513 - 0.027 14.6 0.2 0.038 14.1 0.2 1.2 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger IL4_i_Ig PF18258.1 ORF133810 - 0.0016 18.6 0.8 0.0022 18.2 0.8 1.2 1 0 0 1 1 1 1 Interleukin-4 inducing immunoglobulin-binding domain DUF3678 PF12435.8 ORF133707 - 0.035 13.5 1.4 2.3 7.6 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) DUF4599 PF15371.6 ORF133443 - 0.06 13.9 2.1 5.8 7.5 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4599) DUF2441 PF10386.9 ORF133257 - 0.049 13.6 0.9 0.086 12.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2441) zf_CCCH_4 PF18345.1 ORF132566 - 1.1e-07 31.6 1.4 2.1e-07 30.8 1.4 1.5 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 ORF132566 - 3.3e-07 30.1 0.1 5.9e-07 29.2 0.1 1.5 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF132566 - 0.00014 21.6 0.2 0.00014 21.6 0.2 1.7 2 0 0 2 2 2 1 CCCH-type zinc finger Torus PF16131.5 ORF132566 - 0.00098 19.8 0.0 0.0012 19.5 0.0 1.2 1 0 0 1 1 1 1 Torus domain zf-CCCH_2 PF14608.6 ORF132566 - 0.0037 17.7 0.0 0.0061 17.0 0.0 1.4 1 0 0 1 1 1 1 RNA-binding, Nab2-type zinc finger zf-CCCH_3 PF15663.5 ORF132566 - 0.0088 16.3 0.1 0.012 15.8 0.1 1.2 1 0 0 1 1 1 1 Zinc-finger containing family Allantoicase PF03561.15 ORF132443 - 0.1 12.6 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Allantoicase repeat DUF2684 PF10885.8 ORF131004 - 0.042 14.0 1.6 0.066 13.3 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) K_channel_TID PF07941.11 ORF130705 - 0.34 11.4 10.2 0.79 10.2 10.2 1.6 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain Ada_Zn_binding PF02805.16 ORF130211 - 0.56 10.3 4.0 3.4 7.8 0.2 2.3 2 0 0 2 2 2 0 Metal binding domain of Ada FGFR3_TM PF18123.1 ORF130211 - 0.92 9.1 10.2 0.54 9.8 3.4 2.5 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Capsid-VNN PF11729.8 ORF130211 - 8.8 5.2 6.5 7.8 5.4 0.1 2.0 2 0 0 2 2 2 0 nodavirus capsid protein HycA_repressor PF11046.8 ORF12917 - 0.0093 16.2 0.5 0.011 16.0 0.5 1.1 1 0 0 1 1 1 1 Transcriptional repressor of hyc and hyp operons DUF2340 PF10209.9 ORF12917 - 0.022 15.2 0.2 0.027 14.9 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2340) Orf78 PF06024.12 ORF12874 - 0.072 13.4 0.6 0.11 12.8 0.6 1.3 1 0 0 1 1 1 0 Orf78 (ac78) CvfB_WH PF17783.1 ORF128263 - 0.0078 16.0 0.2 0.015 15.1 0.2 1.4 1 0 0 1 1 1 1 CvfB-like winged helix domain Lectin_N PF03954.14 ORF128263 - 0.046 13.5 0.3 0.06 13.1 0.3 1.1 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain PROL5-SMR PF15621.6 ORF126721 - 0.98 10.0 14.5 1.5 9.3 14.5 1.3 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Fer4_4 PF12800.7 ORF126586 - 1.2 9.8 12.7 1.3 9.7 2.4 3.0 3 1 0 3 3 3 0 4Fe-4S binding domain Fer4_3 PF12798.7 ORF126586 - 3.1 8.9 10.6 4.6 8.4 4.2 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain BRI3BP PF14965.6 ORF126167 - 0.66 9.5 6.6 0.82 9.2 6.6 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 TnsD PF15978.5 ORF126151 - 0.077 12.0 0.0 0.077 12.0 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D COR PF16095.5 ORF125872 - 0.013 15.4 1.8 0.015 15.1 1.8 1.1 1 0 0 1 1 1 0 C-terminal of Roc, COR, domain Nucleoporin_FG2 PF15967.5 ORF125698 - 0.57 8.7 4.6 0.57 8.6 4.6 1.0 1 0 0 1 1 1 0 Nucleoporin FG repeated region P3A PF08727.11 ORF125524 - 0.083 12.3 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 Poliovirus 3A protein like zf-RING-like PF08746.11 ORF125237 - 1.9 8.9 12.0 5.5 7.4 5.5 2.2 1 1 1 2 2 2 0 RING-like domain DUF1499 PF07386.11 ORF125173 - 0.007 16.9 0.0 0.0088 16.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) HPTransfase PF10090.9 ORF125017 - 0.093 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Histidine phosphotransferase C-terminal domain DUF4227 PF14004.6 ORF124971 - 0.11 12.5 3.5 0.15 12.1 2.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) DUF2232 PF09991.9 ORF123233 - 0.0043 16.3 0.2 0.0053 16.0 0.2 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2232) 7tm_1 PF00001.21 ORF123233 - 0.011 15.0 0.4 0.012 14.9 0.4 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) Sigma_reg_N PF13800.6 ORF123233 - 0.47 10.8 2.7 0.51 10.7 2.1 1.4 1 1 0 1 1 1 0 Sigma factor regulator N-terminal DUF3543 PF12063.8 ORF123013 - 0.0079 15.6 0.4 0.008 15.6 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3543) HEPN_RiboL-PSP PF18735.1 ORF123013 - 0.078 12.9 4.6 0.079 12.9 4.6 1.1 1 0 0 1 1 1 0 RiboL-PSP-HEPN Terminase_5 PF06056.12 ORF122875 - 0.12 12.3 0.2 0.31 11.0 0.1 1.7 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) Protein_K PF12283.8 ORF122568 - 0.0084 16.3 0.0 0.011 15.9 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage protein K LAM_C PF12544.8 ORF121464 - 0.0038 17.4 0.1 0.004 17.3 0.1 1.2 1 0 0 1 1 1 1 Lysine-2,3-aminomutase IncE PF17627.2 ORF121170 - 0.1 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Inclusion membrane protein E DUF1746 PF08508.10 ORF120712 - 0.098 13.0 3.1 0.13 12.6 3.1 1.2 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1746) DUF1658 PF07871.11 ORF118915 - 1.2 9.2 10.7 0.58 10.2 2.9 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) DUF5318 PF17249.2 ORF11692 - 0.054 13.3 0.1 0.067 13.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5318) DUF2484 PF10658.9 ORF116151 - 0.033 14.5 0.4 0.083 13.2 0.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2484) MAP65_ASE1 PF03999.12 ORF115505 - 3.8 6.1 4.7 4.1 6.0 4.7 1.0 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) DUF465 PF04325.13 ORF114471 - 0.00033 20.6 7.6 0.025 14.6 2.9 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF465) ADIP PF11559.8 ORF114471 - 0.005 16.9 11.5 0.013 15.6 11.5 1.6 1 1 0 1 1 1 1 Afadin- and alpha -actinin-Binding ABC_tran_CTD PF16326.5 ORF114471 - 0.0061 16.8 4.3 0.011 16.0 4.3 1.4 1 0 0 1 1 1 1 ABC transporter C-terminal domain DUF4201 PF13870.6 ORF114471 - 0.013 15.2 10.1 0.016 14.9 10.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) APG6_N PF17675.1 ORF114471 - 0.014 16.0 10.2 0.015 15.8 10.2 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Gasdermin_C PF17708.1 ORF114471 - 0.025 14.7 2.4 0.029 14.5 2.4 1.0 1 0 0 1 1 1 0 Gasdermin PUB domain Med4 PF10018.9 ORF114471 - 0.029 14.0 9.3 0.06 13.0 9.3 1.6 1 1 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 YvfG PF09628.10 ORF114471 - 0.04 14.3 0.2 0.071 13.5 0.2 1.5 1 1 0 1 1 1 0 YvfG protein KELK PF15796.5 ORF114471 - 0.042 14.3 9.4 0.051 14.0 9.4 1.1 1 0 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase MAD PF05557.13 ORF114471 - 0.047 12.1 10.6 0.053 11.9 10.6 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein PKcGMP_CC PF16808.5 ORF114471 - 0.049 13.5 9.8 0.075 12.9 1.5 3.3 3 1 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase CEP63 PF17045.5 ORF114471 - 0.049 13.5 7.7 0.37 10.7 6.8 1.8 1 1 1 2 2 2 0 Centrosomal protein of 63 kDa GAPT PF11770.8 ORF114471 - 0.051 13.4 3.1 0.058 13.3 3.1 1.1 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) EzrA PF06160.12 ORF114471 - 0.056 11.6 10.7 0.061 11.5 10.7 1.0 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA ZapB PF06005.12 ORF114471 - 0.064 13.7 14.1 2.3 8.7 2.4 2.1 1 1 1 2 2 2 0 Cell division protein ZapB HOOK PF05622.12 ORF114471 - 0.07 11.3 10.8 0.086 11.0 10.8 1.0 1 0 0 1 1 1 0 HOOK protein DivIC PF04977.15 ORF114471 - 0.073 12.8 13.6 0.46 10.3 3.5 2.3 1 1 1 2 2 2 0 Septum formation initiator DUF4686 PF15742.5 ORF114471 - 0.073 12.2 11.5 0.082 12.0 11.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4686) Fmp27_WPPW PF10359.9 ORF114471 - 0.078 11.8 7.1 0.089 11.6 7.1 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain CENP-F_leu_zip PF10473.9 ORF114471 - 0.078 13.0 11.8 0.11 12.5 11.8 1.2 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YabA PF06156.13 ORF114471 - 0.079 13.6 8.9 0.44 11.2 8.9 1.9 1 1 0 1 1 1 0 Initiation control protein YabA DUF3232 PF11554.8 ORF114471 - 0.084 13.3 4.2 0.097 13.0 4.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) Synaptobrevin PF00957.21 ORF114471 - 0.087 12.6 4.0 0.13 12.1 4.0 1.2 1 0 0 1 1 1 0 Synaptobrevin CENP-H PF05837.12 ORF114471 - 0.088 13.2 8.8 0.68 10.4 8.8 1.9 1 1 0 1 1 1 0 Centromere protein H (CENP-H) TPR_MLP1_2 PF07926.12 ORF114471 - 0.095 12.8 10.4 0.1 12.7 9.3 1.6 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Atg14 PF10186.9 ORF114471 - 0.099 11.7 10.9 0.12 11.4 10.9 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FAM76 PF16046.5 ORF114471 - 0.099 12.0 9.5 0.13 11.6 9.5 1.2 1 0 0 1 1 1 0 FAM76 protein Sec34 PF04136.15 ORF114471 - 0.11 12.4 6.2 0.12 12.3 6.2 1.2 1 0 0 1 1 1 0 Sec34-like family LPP PF04728.13 ORF114471 - 0.11 12.9 4.8 0.27 11.7 0.7 2.2 1 1 1 2 2 2 0 Lipoprotein leucine-zipper HMMR_N PF15905.5 ORF114471 - 0.12 11.9 12.7 0.13 11.7 12.7 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal SlyX PF04102.12 ORF114471 - 0.12 13.0 5.3 0.17 12.5 4.9 1.6 1 1 0 1 1 1 0 SlyX DUF4795 PF16043.5 ORF114471 - 0.12 12.0 10.9 0.25 10.9 10.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) Laminin_I PF06008.14 ORF114471 - 0.13 12.0 10.5 0.24 11.1 10.5 1.5 1 1 0 1 1 1 0 Laminin Domain I Cep57_CLD_2 PF14197.6 ORF114471 - 0.13 12.4 9.5 3 8.0 8.7 2.3 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 Mod_r PF07200.13 ORF114471 - 0.14 12.3 9.7 0.24 11.5 9.7 1.4 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein DUF724 PF05266.14 ORF114471 - 0.16 11.8 8.1 0.24 11.2 8.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF724) CC2-LZ PF16516.5 ORF114471 - 0.17 12.3 11.6 0.59 10.5 1.6 2.2 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator MPS2 PF17060.5 ORF114471 - 0.18 11.1 7.3 0.26 10.5 7.3 1.2 1 0 0 1 1 1 0 Monopolar spindle protein 2 DUF3080 PF11279.8 ORF114471 - 0.22 10.7 4.2 0.26 10.5 4.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3080) DHR10 PF18595.1 ORF114471 - 0.23 11.6 10.1 0.29 11.2 10.1 1.2 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain BRE1 PF08647.11 ORF114471 - 0.23 11.6 12.0 0.1 12.7 3.7 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase PRKG1_interact PF15898.5 ORF114471 - 0.24 12.3 8.7 3.8 8.5 0.7 2.1 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain TolA_bind_tri PF16331.5 ORF114471 - 0.24 11.5 5.9 0.26 11.4 4.2 1.4 1 1 0 1 1 1 0 TolA binding protein trimerisation bZIP_1 PF00170.21 ORF114471 - 0.28 11.3 10.6 1.4 9.0 1.8 2.3 1 1 1 2 2 2 0 bZIP transcription factor DUF1515 PF07439.11 ORF114471 - 0.28 11.2 2.1 0.35 10.9 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) ATG16 PF08614.11 ORF114471 - 0.31 11.2 11.5 0.43 10.8 11.5 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Tropomyosin_1 PF12718.7 ORF114471 - 0.34 11.1 13.7 0.66 10.1 13.7 1.5 1 1 0 1 1 1 0 Tropomyosin like Spc7 PF08317.11 ORF114471 - 0.41 9.5 11.3 1.5 7.6 11.5 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein UPF0242 PF06785.11 ORF114471 - 0.42 10.7 10.2 0.51 10.4 10.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus KLRAQ PF10205.9 ORF114471 - 0.43 10.9 9.0 0.57 10.5 9.0 1.2 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein Prefoldin_2 PF01920.20 ORF114471 - 0.45 10.5 13.2 2.6 8.1 1.8 2.0 1 1 1 2 2 2 0 Prefoldin subunit Cnn_1N PF07989.11 ORF114471 - 0.47 10.6 10.0 3.8 7.7 9.7 2.2 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 CEP209_CC5 PF16574.5 ORF114471 - 0.49 10.6 10.0 0.05 13.8 3.2 2.0 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 DUF745 PF05335.13 ORF114471 - 0.54 10.0 3.7 0.61 9.8 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF745) DUF4407 PF14362.6 ORF114471 - 0.54 9.6 5.3 0.7 9.2 5.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GAS PF13851.6 ORF114471 - 0.54 9.6 13.7 0.73 9.1 13.7 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Herpes_UL6 PF01763.16 ORF114471 - 0.58 8.6 6.7 0.68 8.4 6.7 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like FlaC_arch PF05377.11 ORF114471 - 0.6 10.5 12.6 3.1 8.3 2.6 2.2 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Csm1_N PF18504.1 ORF114471 - 0.61 10.5 12.0 0.3 11.4 3.8 2.2 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF3450 PF11932.8 ORF114471 - 0.65 9.2 9.9 4.1 6.6 9.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Fib_alpha PF08702.10 ORF114471 - 0.66 10.1 11.0 1.3 9.2 2.4 2.0 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF812 PF05667.11 ORF114471 - 0.83 8.5 11.6 0.94 8.3 11.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF641 PF04859.12 ORF114471 - 0.84 10.0 8.1 0.83 10.0 1.4 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Swi5 PF07061.11 ORF114471 - 0.95 9.6 9.8 6 7.0 2.5 2.2 1 1 1 2 2 2 0 Swi5 GrpE PF01025.19 ORF114471 - 1 9.0 11.3 41 3.8 11.3 2.0 1 1 0 1 1 1 0 GrpE Seryl_tRNA_N PF02403.22 ORF114471 - 1.1 9.6 11.6 0.88 9.8 2.3 2.0 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Spc24 PF08286.11 ORF114471 - 1.1 9.5 10.9 4.8 7.5 4.6 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 BST2 PF16716.5 ORF114471 - 1.2 9.7 10.4 1.8 9.2 10.4 1.3 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 TMF_DNA_bd PF12329.8 ORF114471 - 1.7 8.7 16.6 7.9 6.6 14.4 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding V_ATPase_I PF01496.19 ORF114471 - 1.9 6.3 6.9 2 6.3 6.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TSC22 PF01166.18 ORF114471 - 2.6 8.4 8.6 4.2 7.7 1.1 2.9 2 1 2 4 4 3 0 TSC-22/dip/bun family TMPIT PF07851.13 ORF114471 - 3 7.0 7.4 3.6 6.7 7.4 1.1 1 0 0 1 1 1 0 TMPIT-like protein Pox_A_type_inc PF04508.12 ORF114471 - 5.2 7.1 9.7 6 6.9 0.3 3.8 4 0 0 4 4 4 0 Viral A-type inclusion protein repeat DUF4116 PF13475.6 ORF114105 - 0.065 13.0 0.1 0.1 12.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) Reoviridae_Vp9 PF08978.10 ORF112821 - 0.03 13.5 0.0 0.038 13.2 0.0 1.1 1 0 0 1 1 1 0 Reoviridae VP9 YscO PF07321.12 ORF112252 - 0.00038 20.4 0.3 0.00045 20.2 0.3 1.2 1 0 0 1 1 1 1 Type III secretion protein YscO ZapB PF06005.12 ORF112252 - 0.0017 18.8 6.9 0.0032 17.9 6.9 1.5 1 0 0 1 1 1 1 Cell division protein ZapB Cnn_1N PF07989.11 ORF112252 - 0.0027 17.8 0.8 0.005 17.0 0.8 1.4 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 bZIP_1 PF00170.21 ORF112252 - 0.0029 17.7 3.5 0.0051 16.9 3.5 1.4 1 0 0 1 1 1 1 bZIP transcription factor TMF_DNA_bd PF12329.8 ORF112252 - 0.0031 17.5 4.5 0.0051 16.8 4.5 1.4 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding KLRAQ PF10205.9 ORF112252 - 0.0043 17.2 1.3 0.0054 16.9 1.1 1.4 1 1 0 1 1 1 1 Predicted coiled-coil domain-containing protein TPR_MLP1_2 PF07926.12 ORF112252 - 0.0049 16.9 2.6 0.0072 16.4 2.6 1.3 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein CENP-F_N PF10481.9 ORF112252 - 0.0068 16.1 0.0 0.0076 15.9 0.0 1.1 1 0 0 1 1 1 1 Cenp-F N-terminal domain BLOC1_2 PF10046.9 ORF112252 - 0.0092 16.3 0.5 0.091 13.1 0.2 2.0 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 PI3K_P85_iSH2 PF16454.5 ORF112252 - 0.0094 15.6 1.6 0.012 15.2 1.3 1.4 1 1 0 1 1 1 1 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4407 PF14362.6 ORF112252 - 0.011 15.1 0.3 0.011 15.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) GIT_CC PF16559.5 ORF112252 - 0.012 15.4 0.1 0.018 14.9 0.1 1.3 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor Spc7 PF08317.11 ORF112252 - 0.013 14.4 0.7 0.013 14.4 0.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF2730 PF10805.8 ORF112252 - 0.013 15.6 0.8 0.017 15.2 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2730) Ax_dynein_light PF10211.9 ORF112252 - 0.014 15.3 2.0 0.021 14.8 2.0 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain V_ATPase_I PF01496.19 ORF112252 - 0.016 13.2 0.3 0.018 13.0 0.3 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Yuri_gagarin PF15934.5 ORF112252 - 0.016 15.0 0.3 0.016 15.0 0.3 1.0 1 0 0 1 1 1 0 Yuri gagarin GAS PF13851.6 ORF112252 - 0.02 14.3 2.9 0.02 14.3 2.9 1.4 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DivIC PF04977.15 ORF112252 - 0.024 14.4 3.3 0.025 14.3 2.3 1.5 2 0 0 2 2 1 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF112252 - 0.024 14.9 4.7 0.032 14.5 4.7 1.4 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain CLZ PF16526.5 ORF112252 - 0.024 15.0 3.1 0.18 12.2 3.0 1.9 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Shugoshin_N PF07558.11 ORF112252 - 0.026 14.4 5.2 0.86 9.5 2.6 2.3 1 1 1 2 2 2 0 Shugoshin N-terminal coiled-coil region FlaC_arch PF05377.11 ORF112252 - 0.027 14.8 6.1 0.077 13.4 1.9 2.6 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) BST2 PF16716.5 ORF112252 - 0.031 14.9 1.7 0.048 14.2 1.7 1.3 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 GrpE PF01025.19 ORF112252 - 0.031 13.9 5.5 0.049 13.3 4.4 1.8 1 1 0 2 2 2 0 GrpE APG6_N PF17675.1 ORF112252 - 0.031 14.8 5.0 0.038 14.5 5.0 1.3 1 1 0 1 1 1 0 Apg6 coiled-coil region HALZ PF02183.18 ORF112252 - 0.037 14.3 3.4 0.091 13.0 3.5 1.7 1 1 0 1 1 1 0 Homeobox associated leucine zipper CP12 PF02672.15 ORF112252 - 0.042 14.6 0.6 0.042 14.6 0.6 1.7 2 0 0 2 2 2 0 CP12 domain LPP PF04728.13 ORF112252 - 0.05 14.0 1.8 0.1 13.0 1.8 1.5 1 0 0 1 1 1 0 Lipoprotein leucine-zipper bZIP_2 PF07716.15 ORF112252 - 0.1 12.7 5.6 0.2 11.7 5.6 1.5 1 0 0 1 1 1 0 Basic region leucine zipper DivIVA PF05103.13 ORF112252 - 0.12 12.4 3.5 0.099 12.7 2.2 1.5 2 0 0 2 2 1 0 DivIVA protein DUF4337 PF14235.6 ORF112252 - 0.14 12.2 0.1 0.17 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Atg14 PF10186.9 ORF112252 - 0.17 10.9 1.2 0.22 10.6 1.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TSC22 PF01166.18 ORF112252 - 0.24 11.7 3.6 0.48 10.8 3.6 1.6 1 1 0 1 1 1 0 TSC-22/dip/bun family BRI3BP PF14965.6 ORF112252 - 0.25 10.8 0.1 0.31 10.6 0.1 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 Ribosomal_L29 PF00831.23 ORF112252 - 2.6 8.1 6.7 1.9 8.5 4.4 1.9 1 1 1 2 2 2 0 Ribosomal L29 protein PROL5-SMR PF15621.6 ORF111266 - 0.98 10.0 14.5 1.5 9.3 14.5 1.3 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Ribosomal_L33 PF00471.20 ORF110988 - 0.012 16.0 0.1 0.019 15.4 0.1 1.4 1 1 0 1 1 1 0 Ribosomal protein L33 GET2 PF08690.10 ORF108963 - 0.17 11.6 0.1 0.17 11.5 0.1 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 SLM4 PF16818.5 ORF108814 - 0.078 12.9 0.3 0.089 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein SLM4 Pox_L3_FP4 PF03339.14 ORF108578 - 0.17 10.8 0.0 0.18 10.8 0.0 1.1 1 0 0 1 1 1 0 Poxvirus L3/FP4 protein B2-adapt-app_C PF09066.10 ORF10855 - 0.00024 21.2 0.0 0.00028 21.0 0.0 1.0 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain POC1 PF10450.9 ORF108435 - 0.18 10.8 0.3 0.2 10.6 0.3 1.1 1 0 0 1 1 1 0 POC1 chaperone Cdd1 PF11731.8 ORF107856 - 0.1 12.8 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 Pathogenicity locus Tail_VII PF17091.5 ORF107474 - 0.12 12.2 0.9 0.24 11.3 0.9 1.5 1 0 0 1 1 1 0 Inovirus G7P protein Glyco_transf_20 PF00982.21 ORF107258 - 0.18 10.4 0.0 0.22 10.1 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 BRI3BP PF14965.6 ORF107250 - 0.66 9.5 6.6 0.82 9.2 6.6 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 AgrD PF05931.11 ORF106771 - 0.056 13.5 1.2 0.056 13.5 1.2 1.7 2 0 0 2 2 2 0 Staphylococcal AgrD protein Ank_3 PF13606.6 ORF106528 - 0.00013 22.1 0.1 0.00024 21.3 0.1 1.5 1 0 0 1 1 1 1 Ankyrin repeat Ank PF00023.30 ORF106528 - 0.0058 17.0 0.2 0.0099 16.3 0.2 1.4 1 0 0 1 1 1 1 Ankyrin repeat Ank_4 PF13637.6 ORF106528 - 0.006 17.1 0.1 0.0098 16.5 0.1 1.4 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF106528 - 0.007 16.9 0.0 0.01 16.4 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) CLIP1_ZNF PF16641.5 ORF104911 - 0.47 10.4 0.1 0.47 10.4 0.1 2.6 2 1 0 2 2 2 0 CLIP1 zinc knuckle Bcl-2_BAD PF10514.9 ORF104730 - 0.12 12.8 3.3 0.15 12.5 3.3 1.1 1 0 0 1 1 1 0 Pro-apoptotic Bcl-2 protein, BAD XAP5 PF04921.14 ORF102854 - 0.00053 19.9 1.3 0.00067 19.6 1.3 1.0 1 0 0 1 1 1 1 XAP5, circadian clock regulator FANCI_S1-cap PF14674.6 ORF102438 - 0.045 13.8 0.1 0.1 12.7 0.1 1.6 2 0 0 2 2 2 0 FANCI solenoid 1 cap Pap_E4 PF02711.14 ORF102331 - 0.3 12.1 1.6 0.38 11.7 1.6 1.2 1 0 0 1 1 1 0 E4 protein Toxin_28 PF08115.11 ORF101898 - 0.28 11.1 2.8 0.43 10.5 2.8 1.3 1 0 0 1 1 1 0 SFI toxin family Ribosomal_S19 PF00203.21 ORF101552 - 5.1e-36 122.4 0.0 5.8e-36 122.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19 DDE_Tnp_1_2 PF13586.6 ORF101306 - 0.054 13.9 0.8 0.075 13.4 0.8 1.1 1 0 0 1 1 1 0 Transposase DDE domain Methyltransf_20 PF12147.8 ORF101064 - 0.058 12.5 0.0 0.068 12.3 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase EB PF01683.18 ORF101008 - 0.061 13.6 11.9 0.092 13.1 11.9 1.3 1 0 0 1 1 1 0 EB module LSM PF01423.22 ORF100390 - 7.5e-08 32.0 3.2 8e-06 25.5 3.2 2.2 1 1 0 1 1 1 1 LSM domain Gemini_coat PF00844.18 ORF100061 - 0.05 13.0 0.0 0.057 12.9 0.0 1.0 1 0 0 1 1 1 0 Geminivirus coat protein/nuclear export factor BR1 family HemY_N PF07219.13 NODE_60731_length_271_cov_1.059322_g52791_i0forward_frame_1 - 0.0015 18.7 2.4 0.0015 18.7 2.4 1.8 2 0 0 2 2 2 1 HemY protein N-terminus GWT1 PF06423.12 NODE_60731_length_271_cov_1.059322_g52791_i0forward_frame_1 - 0.23 11.6 3.1 0.27 11.4 3.1 1.1 1 0 0 1 1 1 0 GWT1 E1-E2_ATPase PF00122.20 NODE_60731_length_271_cov_1.059322_g52791_i0forward_frame_1 - 1.1 8.7 4.5 1.7 8.1 4.5 1.3 1 1 0 1 1 1 0 E1-E2 ATPase ATP-synt_8 PF00895.20 NODE_60731_length_271_cov_1.059322_g52791_i0forward_frame_1 - 5.9 7.4 8.7 9.9 6.7 1.2 2.5 2 1 1 3 3 3 0 ATP synthase protein 8 FH2 PF02181.23 NODE_60730_length_271_cov_1.093220_g52790_i0reverse_frame_1 - 0.07 12.2 0.3 0.075 12.1 0.3 1.0 1 0 0 1 1 1 0 Formin Homology 2 Domain C2-set PF05790.15 NODE_60728_length_271_cov_1.182203_g52788_i0forward_frame_1 - 0.0021 18.2 1.3 0.0027 17.9 1.3 1.2 1 0 0 1 1 1 1 Immunoglobulin C2-set domain DUF2633 PF11119.8 NODE_60722_length_271_cov_1.347458_g52782_i0forward_frame_1 - 0.046 13.6 0.5 0.07 13.0 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) HisKA_3 PF07730.13 NODE_60721_length_271_cov_1.351695_g52781_i0forward_frame_1 - 0.097 13.2 0.1 0.12 12.9 0.1 1.1 1 0 0 1 1 1 0 Histidine kinase Dynein_attach_N PF15867.5 NODE_60714_length_271_cov_1.508475_g52774_i0forward_frame_1 - 0.099 12.6 0.1 0.15 12.0 0.1 1.2 1 0 0 1 1 1 0 Dynein attachment factor N-terminus AAA_9 PF12781.7 NODE_60709_length_271_cov_1.673729_g52769_i0reverse_frame_1 - 1e-32 113.1 0.2 1.1e-32 113.0 0.2 1.0 1 0 0 1 1 1 1 ATP-binding dynein motor region GGA_N-GAT PF18308.1 NODE_60709_length_271_cov_1.673729_g52769_i0reverse_frame_1 - 0.12 12.1 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 GGA N-GAT domain MORN PF02493.20 NODE_60706_length_271_cov_1.711864_g52766_i0forward_frame_1 - 6.7e-07 28.8 3.2 0.063 13.2 0.6 3.7 3 1 0 3 3 3 3 MORN repeat 53-BP1_Tudor PF09038.10 NODE_60706_length_271_cov_1.711864_g52766_i0forward_frame_1 - 0.0042 17.0 0.6 0.0075 16.2 0.2 1.6 1 1 1 2 2 2 1 Tumour suppressor p53-binding protein-1 Tudor Bcr-Abl_Oligo PF09036.10 NODE_60701_length_271_cov_1.822034_g52761_i0reverse_frame_1 - 1.8 8.6 6.2 2.2 8.3 3.6 2.2 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain DUF743 PF05332.11 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_1 - 0.034 14.2 1.0 0.14 12.2 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF743) Androgen_recep PF02166.16 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_1 - 3.8 6.3 4.7 4.5 6.0 4.7 1.1 1 0 0 1 1 1 0 Androgen receptor TAF PF02969.17 NODE_60698_length_271_cov_1.894068_g52758_i0forward_frame_1 - 0.053 13.7 0.0 0.087 13.0 0.0 1.3 1 0 0 1 1 1 0 TATA box binding protein associated factor (TAF) Tox-SGS PF15651.6 NODE_60696_length_271_cov_1.978814_g52756_i0reverse_frame_1 - 0.031 14.5 0.3 0.47 10.7 0.1 2.1 1 1 0 2 2 2 0 Salivary glad secreted protein domain toxin Sec62 PF03839.16 NODE_60693_length_271_cov_2.059322_g52753_i0forward_frame_1 - 0.14 11.6 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 HTH_28 PF13518.6 NODE_60693_length_271_cov_2.059322_g52753_i0forward_frame_1 - 0.16 12.1 0.1 0.28 11.3 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Antimicrobial19 PF08225.11 NODE_60692_length_271_cov_2.072034_g52752_i0reverse_frame_1 - 0.066 12.8 0.0 0.13 11.9 0.0 1.5 1 0 0 1 1 1 0 Pseudin antimicrobial peptide Corona_NS3b PF03053.14 NODE_60692_length_271_cov_2.072034_g52752_i0forward_frame_1 - 1.5 8.5 6.1 1.6 8.4 6.1 1.0 1 0 0 1 1 1 0 ORF3b coronavirus protein Rxt3 PF08642.10 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 0.0076 17.0 0.2 0.0094 16.7 0.2 1.1 1 0 0 1 1 1 1 Histone deacetylation protein Rxt3 Thg1C PF14413.6 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 0.015 15.5 2.4 0.018 15.2 2.4 1.0 1 0 0 1 1 1 0 Thg1 C terminal domain DUF4834 PF16118.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 0.063 14.3 0.7 0.07 14.1 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Folate_carrier PF01770.18 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 0.43 9.3 1.1 0.48 9.1 1.1 1.0 1 0 0 1 1 1 0 Reduced folate carrier Peptidase_S49_N PF08496.10 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 2.2 8.3 4.3 2.6 8.1 4.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Dicty_REP PF05086.12 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_1 - 4.2 5.2 10.2 4.1 5.2 10.2 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Aminotran_1_2 PF00155.21 NODE_60686_length_271_cov_2.173729_g52746_i0forward_frame_1 - 1.1e-07 31.3 0.0 1.4e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II RRM PF10378.9 NODE_60685_length_271_cov_2.182203_g52745_i0forward_frame_1 - 0.014 15.1 0.2 0.024 14.3 0.2 1.4 1 0 0 1 1 1 0 Putative RRM domain Pacifastin_I PF05375.13 NODE_60682_length_271_cov_2.377119_g52742_i0forward_frame_1 - 0.011 15.4 3.8 0.024 14.4 3.8 1.5 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) DUF4723 PF15851.5 NODE_60681_length_271_cov_2.377119_g52741_i0forward_frame_1 - 0.04 14.1 1.7 0.05 13.7 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4723) E1-N PF14463.6 NODE_60676_length_271_cov_2.525424_g52736_i0forward_frame_1 - 0.055 13.3 0.3 0.067 13.0 0.3 1.1 1 0 0 1 1 1 0 E1 N-terminal domain zf-DNA_Pol PF08996.10 NODE_60676_length_271_cov_2.525424_g52736_i0forward_frame_1 - 6.6 6.4 8.6 1.4e+02 2.1 8.6 2.1 1 1 0 1 1 1 0 DNA Polymerase alpha zinc finger CDtoxinA PF03498.14 NODE_60670_length_271_cov_2.868644_g52730_i0reverse_frame_1 - 0.14 11.7 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Cytolethal distending toxin A/C domain Chordopox_A35R PF05989.12 NODE_60664_length_271_cov_4.207627_g52724_i0reverse_frame_1 - 0.057 13.3 0.3 0.13 12.2 0.2 1.6 1 1 1 2 2 2 0 Chordopoxvirus A35R protein Kelch_4 PF13418.6 NODE_60664_length_271_cov_4.207627_g52724_i0forward_frame_1 - 0.00061 19.8 0.0 0.001 19.1 0.0 1.4 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_60664_length_271_cov_4.207627_g52724_i0forward_frame_1 - 0.0095 15.5 0.0 0.013 15.0 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 NODE_60664_length_271_cov_4.207627_g52724_i0forward_frame_1 - 0.023 15.0 0.0 0.031 14.6 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain CTV_P23 PF04808.12 NODE_60662_length_271_cov_5.190678_g52722_i0reverse_frame_1 - 0.04 13.4 0.1 0.04 13.4 0.1 1.2 1 0 0 1 1 1 0 Citrus tristeza virus (CTV) P23 protein Gln-synt_C-ter PF18318.1 NODE_60660_length_271_cov_5.656780_g52720_i0reverse_frame_1 - 0.0045 16.8 0.2 0.005 16.7 0.2 1.1 1 0 0 1 1 1 1 Glutamine synthetase C-terminal domain DapB_N PF01113.20 NODE_60660_length_271_cov_5.656780_g52720_i0reverse_frame_1 - 0.03 14.4 0.1 0.035 14.2 0.1 1.1 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ETRAMP PF09716.10 NODE_60655_length_271_cov_39.144068_g52715_i0reverse_frame_1 - 0.72 10.0 4.3 0.79 9.8 4.3 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) HemY_N PF07219.13 NODE_60654_length_271_cov_42.673729_g52714_i0forward_frame_1 - 0.092 12.9 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 HemY protein N-terminus SR-25 PF10500.9 NODE_60651_length_271_cov_49.313559_g52711_i0forward_frame_1 - 0.098 12.3 6.1 0.11 12.1 6.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF1430 PF07242.11 NODE_60649_length_271_cov_49.775424_g52709_i0reverse_frame_1 - 0.0038 17.5 0.7 0.0048 17.1 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1430) IPK PF03770.16 NODE_60648_length_271_cov_50.512712_g52708_i0reverse_frame_1 - 0.029 14.2 0.1 0.031 14.1 0.1 1.2 1 0 0 1 1 1 0 Inositol polyphosphate kinase zf-CCHH PF10283.9 NODE_60647_length_271_cov_53.491525_g52707_i0forward_frame_1 - 0.053 13.5 0.1 0.083 12.9 0.1 1.3 1 0 0 1 1 1 0 PBZ domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks292.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks292.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks292.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks292.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Kelch_3 PF13415.6 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 5.3e-09 36.1 1.1 9.7e-09 35.3 0.8 1.5 1 1 1 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 8.2e-07 28.9 0.2 1.1e-05 25.4 0.3 2.0 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 9.6e-05 22.3 0.5 0.01 15.8 0.1 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 0.00015 22.0 0.2 0.00022 21.4 0.2 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 NODE_60638_length_271_cov_61.686441_g52698_i0forward_frame_1 - 0.00036 20.1 0.3 0.00036 20.1 0.3 1.5 2 0 0 2 2 2 1 Kelch motif GRIM-19 PF06212.12 NODE_60637_length_271_cov_62.046610_g52697_i0forward_frame_1 - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 GRIM-19 protein zf-XS PF03470.14 NODE_60631_length_271_cov_73.254237_g52691_i0reverse_frame_1 - 0.058 13.7 0.0 0.058 13.7 0.0 2.3 2 0 0 2 2 2 0 XS zinc finger domain Peptidase_S49_N PF08496.10 NODE_60630_length_271_cov_77.152542_g52690_i0reverse_frame_1 - 0.056 13.5 6.1 0.061 13.4 6.1 1.2 1 1 0 1 1 1 0 Peptidase family S49 N-terminal Pox_Ag35 PF03286.14 NODE_60630_length_271_cov_77.152542_g52690_i0reverse_frame_1 - 0.24 11.2 9.9 0.28 10.9 9.9 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein EMC3_TMCO1 PF01956.16 NODE_60630_length_271_cov_77.152542_g52690_i0reverse_frame_1 - 0.35 10.6 1.8 0.39 10.4 1.8 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like COesterase PF00135.28 NODE_60624_length_271_cov_94.847458_g52684_i0reverse_frame_1 - 0.12 11.3 0.7 0.15 10.9 0.7 1.1 1 0 0 1 1 1 0 Carboxylesterase family B_solenoid_dext PF18841.1 NODE_60623_length_271_cov_99.042373_g52683_i0reverse_frame_1 - 0.09 13.1 0.8 0.16 12.3 0.8 1.4 1 0 0 1 1 1 0 Beta solenoid repeat from Dextranase CCDC106 PF15794.5 NODE_60623_length_271_cov_99.042373_g52683_i0reverse_frame_1 - 3 7.5 17.6 4.3 7.0 17.6 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 TMEM208_SND2 PF05620.11 NODE_60620_length_271_cov_119.330508_g52680_i0reverse_frame_1 - 0.21 11.4 3.0 0.26 11.1 3.0 1.3 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 Gamma-thionin PF00304.20 NODE_60618_length_271_cov_124.889831_g52678_i0forward_frame_1 - 0.06 13.6 0.2 0.097 12.9 0.2 1.3 1 0 0 1 1 1 0 Gamma-thionin family YWFCY PF14293.6 NODE_60613_length_271_cov_165.271186_g52673_i0forward_frame_1 - 0.23 11.8 4.2 0.42 11.0 4.2 1.4 1 0 0 1 1 1 0 YWFCY protein Skp1 PF01466.19 NODE_60609_length_271_cov_311.177966_g52669_i0reverse_frame_1 - 0.0026 17.8 0.3 0.0036 17.4 0.3 1.2 1 0 0 1 1 1 1 Skp1 family, dimerisation domain ORMDL PF04061.14 NODE_60608_length_271_cov_332.843220_g52668_i0forward_frame_1 - 0.0093 15.8 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 ORMDL family DUF2633 PF11119.8 NODE_60602_length_271_cov_81529.114407_g52662_i0reverse_frame_1 - 0.95 9.4 3.4 1.4 8.9 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) DUF4404 PF14357.6 NODE_60599_length_272_cov_1.130802_g52659_i0forward_frame_1 - 0.022 15.4 0.4 0.03 15.0 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) DUF2956 PF11169.8 NODE_60594_length_272_cov_1.265823_g52654_i0reverse_frame_1 - 0.034 14.3 0.1 0.038 14.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2956) DUF2292 PF10055.9 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_1 - 0.053 13.2 0.0 0.075 12.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized small protein (DUF2292) Inhibitor_I68 PF10468.9 NODE_60590_length_272_cov_1.333333_g52650_i0reverse_frame_1 - 0.14 12.6 0.9 0.26 11.7 0.1 1.8 2 0 0 2 2 2 0 Carboxypeptidase inhibitor I68 DUF1322 PF07032.11 NODE_60586_length_272_cov_1.396624_g52646_i0reverse_frame_1 - 0.04 14.4 0.6 0.04 14.4 0.6 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1322) Papilloma_E5 PF03025.14 NODE_60586_length_272_cov_1.396624_g52646_i0forward_frame_1 - 0.79 9.9 13.9 2.1 8.6 6.8 2.2 1 1 1 2 2 2 0 Papillomavirus E5 Herp-Cyclin PF09241.10 NODE_60584_length_272_cov_1.413502_g52644_i0forward_frame_1 - 0.12 13.1 0.5 0.13 12.9 0.5 1.1 1 0 0 1 1 1 0 Herpesviridae viral cyclin F-box_5 PF18511.1 NODE_60578_length_272_cov_1.523207_g52638_i0reverse_frame_1 - 0.0012 18.4 0.2 0.0021 17.6 0.2 1.4 1 0 0 1 1 1 1 F-box HTH_ABP1_N PF18107.1 NODE_60576_length_272_cov_1.594937_g52636_i0forward_frame_1 - 0.016 14.9 0.7 0.59 9.9 0.1 2.1 2 0 0 2 2 2 0 Fission yeast centromere protein N-terminal domain UPF0547 PF10571.9 NODE_60564_length_272_cov_1.729958_g52624_i0forward_frame_1 - 0.011 15.8 0.2 0.027 14.5 0.2 1.7 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 NODE_60564_length_272_cov_1.729958_g52624_i0forward_frame_1 - 0.028 13.8 0.4 0.047 13.1 0.4 1.4 1 0 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 NODE_60564_length_272_cov_1.729958_g52624_i0forward_frame_1 - 0.048 13.2 0.2 0.073 12.6 0.2 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding cNMP_binding PF00027.29 NODE_60563_length_272_cov_1.738397_g52623_i0reverse_frame_1 - 2.5e-16 59.5 0.0 3e-16 59.3 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Cupin_1 PF00190.22 NODE_60563_length_272_cov_1.738397_g52623_i0reverse_frame_1 - 0.066 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Cupin DUF3678 PF12435.8 NODE_60557_length_272_cov_1.856540_g52617_i0reverse_frame_1 - 0.026 13.9 0.2 0.062 12.7 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) ASH PF15780.5 NODE_60557_length_272_cov_1.856540_g52617_i0forward_frame_1 - 0.0043 17.2 0.1 0.0059 16.8 0.1 1.3 1 0 0 1 1 1 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin wnt PF00110.19 NODE_60552_length_272_cov_1.966245_g52612_i0reverse_frame_1 - 1.9 8.0 8.5 2.4 7.7 8.5 1.1 1 0 0 1 1 1 0 wnt family DUF4972 PF16342.5 NODE_60551_length_272_cov_1.970464_g52611_i0forward_frame_1 - 0.26 11.0 2.0 0.43 10.3 1.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4972) MIF4G_like_2 PF09090.11 NODE_60542_length_272_cov_2.130802_g52602_i0forward_frame_1 - 0.082 12.4 0.1 0.087 12.3 0.1 1.1 1 0 0 1 1 1 0 MIF4G like DUF4296 PF14129.6 NODE_60541_length_272_cov_2.143460_g52601_i0reverse_frame_1 - 0.05 14.2 4.8 0.072 13.7 4.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4296) WD40 PF00400.32 NODE_60540_length_272_cov_2.151899_g52600_i0reverse_frame_1 - 1.2e-06 29.1 0.1 1.9e-06 28.5 0.1 1.3 1 0 0 1 1 1 1 WD domain, G-beta repeat NPA PF16469.5 NODE_60540_length_272_cov_2.151899_g52600_i0reverse_frame_1 - 0.014 15.9 3.8 0.017 15.7 3.8 1.1 1 0 0 1 1 1 0 Nematode polyprotein allergen ABA-1 YqgC PF17430.2 NODE_60532_length_272_cov_2.738397_g52592_i0forward_frame_1 - 0.25 11.4 1.7 0.8 9.8 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized YqgC-like DUF5552 PF17706.1 NODE_60528_length_272_cov_2.978903_g52588_i0forward_frame_1 - 0.017 14.9 0.1 0.02 14.7 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5552) DUF2299 PF10061.9 NODE_60528_length_272_cov_2.978903_g52588_i0forward_frame_1 - 0.026 14.3 0.0 0.05 13.3 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2299) RCC1_2 PF13540.6 NODE_60523_length_272_cov_3.502110_g52583_i0forward_frame_1 - 0.0022 17.7 0.3 0.13 12.1 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat GSP_synth PF03738.14 NODE_60520_length_272_cov_3.987342_g52580_i0forward_frame_1 - 0.16 11.1 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Glutathionylspermidine synthase preATP-grasp Hs1pro-1_C PF07014.12 NODE_60518_length_272_cov_4.413502_g52578_i0reverse_frame_1 - 0.041 13.4 0.0 0.041 13.4 0.0 1.1 1 0 0 1 1 1 0 Hs1pro-1 protein C-terminus LptD PF04453.14 NODE_60518_length_272_cov_4.413502_g52578_i0reverse_frame_1 - 0.085 12.1 0.0 0.09 12.0 0.0 1.0 1 0 0 1 1 1 0 LPS transport system D Cyd_oper_YbgE PF09600.10 NODE_60518_length_272_cov_4.413502_g52578_i0forward_frame_1 - 0.08 13.3 0.4 0.13 12.6 0.3 1.6 1 1 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) DUF692 PF05114.13 NODE_60514_length_272_cov_27.008439_g52574_i0forward_frame_1 - 0.027 13.7 0.0 0.027 13.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF692) Connexin PF00029.19 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_1 - 6 6.6 6.4 7.3 6.3 6.4 1.0 1 0 0 1 1 1 0 Connexin CCDC71L PF15374.6 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_1 - 8.4 5.5 12.9 9.5 5.4 12.9 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 71L RB_A PF01858.17 NODE_60507_length_272_cov_41.746835_g52567_i0reverse_frame_1 - 0.017 14.9 0.5 0.018 14.9 0.5 1.0 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain NCOA_u2 PF16665.5 NODE_60507_length_272_cov_41.746835_g52567_i0forward_frame_1 - 0.034 14.5 1.8 0.038 14.3 1.8 1.1 1 0 0 1 1 1 0 Unstructured region on nuclear receptor coactivator protein Lectin_leg-like PF03388.13 NODE_60501_length_272_cov_48.936709_g52561_i0forward_frame_1 - 0.17 11.2 0.1 0.2 11.0 0.1 1.0 1 0 0 1 1 1 0 Legume-like lectin family Squash PF00299.18 NODE_60499_length_272_cov_50.852321_g52559_i0reverse_frame_1 - 0.15 12.1 1.2 0.23 11.5 1.2 1.2 1 0 0 1 1 1 0 Squash family serine protease inhibitor Clr2 PF10383.9 NODE_60498_length_272_cov_50.928270_g52558_i0forward_frame_1 - 0.13 13.1 0.0 0.13 13.0 0.0 1.1 1 0 0 1 1 1 0 Transcription-silencing protein Clr2 Pyr_redox PF00070.27 NODE_60495_length_272_cov_53.945148_g52555_i0forward_frame_1 - 0.0033 18.0 0.0 0.0041 17.6 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pullulanase_Ins PF18494.1 NODE_60493_length_272_cov_59.426160_g52553_i0reverse_frame_1 - 0.11 13.0 0.1 0.15 12.5 0.1 1.2 1 0 0 1 1 1 0 Pullulanase Ins domain DUF2678 PF10856.8 NODE_60492_length_272_cov_59.472574_g52552_i0forward_frame_1 - 4.7 7.2 9.7 18 5.3 9.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2678) C4 PF01413.19 NODE_60487_length_272_cov_63.987342_g52547_i0forward_frame_1 - 0.036 14.4 0.0 0.044 14.2 0.0 1.2 1 0 0 1 1 1 0 C-terminal tandem repeated domain in type 4 procollagen Plant_zn_clust PF10533.9 NODE_60485_length_272_cov_66.902954_g52545_i0reverse_frame_1 - 0.0082 16.1 3.3 0.0082 16.1 3.3 2.2 2 0 0 2 2 2 1 Plant zinc cluster domain BRCA-2_OB3 PF09104.10 NODE_60484_length_272_cov_71.388186_g52544_i0reverse_frame_1 - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 STAT6_C PF14596.6 NODE_60482_length_272_cov_75.430380_g52542_i0forward_frame_1 - 0.079 12.9 0.1 0.086 12.8 0.1 1.1 1 0 0 1 1 1 0 STAT6 C-terminal DUF4820 PF16091.5 NODE_60481_length_272_cov_78.405063_g52541_i0reverse_frame_1 - 0.3 10.4 3.3 0.33 10.3 3.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Stc1 PF12898.7 NODE_60481_length_272_cov_78.405063_g52541_i0forward_frame_1 - 0.052 14.1 0.0 0.095 13.3 0.0 1.4 1 1 0 1 1 1 0 Stc1 domain Apolipoprotein PF01442.18 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.0029 17.5 0.4 0.0034 17.3 0.4 1.1 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain Ground-like PF04155.18 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.0055 17.3 0.2 0.022 15.4 0.1 1.9 1 1 1 2 2 2 1 Ground-like domain PriC PF07445.12 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.0067 16.4 0.4 0.0075 16.2 0.4 1.2 1 0 0 1 1 1 1 Primosomal replication protein priC DUF948 PF06103.11 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.02 15.2 0.6 0.48 10.7 0.6 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Peptidase_M75 PF09375.10 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.065 12.7 0.0 0.077 12.5 0.0 1.1 1 0 0 1 1 1 0 Imelysin DUF465 PF04325.13 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_1 - 0.29 11.2 4.5 0.28 11.2 2.4 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF465) NSP10 PF09401.10 NODE_60478_length_272_cov_87.054852_g52538_i0forward_frame_1 - 0.035 14.2 0.2 0.043 13.9 0.2 1.2 1 0 0 1 1 1 0 RNA synthesis protein NSP10 FNIP PF05725.12 NODE_60476_length_272_cov_89.746835_g52536_i0reverse_frame_1 - 1.9e-08 34.3 1.8 2.8e-08 33.8 1.8 1.2 1 0 0 1 1 1 1 FNIP Repeat Herpeto_peptide PF14409.6 NODE_60476_length_272_cov_89.746835_g52536_i0forward_frame_1 - 3.7 7.9 8.2 8.1 6.8 2.8 2.1 1 1 1 2 2 2 0 Ribosomally synthesized peptide in Herpetosiphon O-antigen_lig PF13425.6 NODE_60466_length_272_cov_122.717300_g52526_i0reverse_frame_1 - 0.0048 15.7 0.9 0.0055 15.6 0.9 1.1 1 0 0 1 1 1 1 O-antigen ligase like membrane protein Sipho_Gp157 PF05565.11 NODE_60466_length_272_cov_122.717300_g52526_i0reverse_frame_1 - 0.0094 16.0 3.8 0.011 15.7 3.8 1.2 1 0 0 1 1 1 1 Siphovirus Gp157 Cytochrom_B559 PF00283.19 NODE_60453_length_272_cov_2527.691983_g52513_i0reverse_frame_1 - 2e-14 52.7 5.4 2.6e-14 52.3 5.4 1.2 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Oleosin PF01277.17 NODE_60453_length_272_cov_2527.691983_g52513_i0reverse_frame_1 - 0.12 12.1 0.5 0.16 11.8 0.5 1.1 1 0 0 1 1 1 0 Oleosin RNase_T PF00929.24 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_1 - 0.0041 17.7 1.7 0.0044 17.6 1.7 1.0 1 0 0 1 1 1 1 Exonuclease PHM7_cyt PF14703.6 NODE_60448_length_273_cov_1.004202_g52508_i0forward_frame_1 - 0.02 15.2 4.0 0.021 15.0 4.0 1.0 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Phe_ZIP PF08916.11 NODE_60448_length_273_cov_1.004202_g52508_i0forward_frame_1 - 0.05 14.3 4.1 0.66 10.7 1.5 2.1 1 1 1 2 2 2 0 Phenylalanine zipper RRP14 PF15459.6 NODE_60448_length_273_cov_1.004202_g52508_i0forward_frame_1 - 0.48 11.1 8.1 1 10.0 8.1 1.5 1 1 0 1 1 1 0 60S ribosome biogenesis protein Rrp14 zf-CCHC_4 PF14392.6 NODE_60444_length_273_cov_1.088235_g52504_i0reverse_frame_1 - 0.00076 19.2 15.5 0.011 15.5 1.2 3.1 2 1 1 3 3 3 2 Zinc knuckle zf-CCHC PF00098.23 NODE_60444_length_273_cov_1.088235_g52504_i0reverse_frame_1 - 0.00089 19.2 16.1 0.00092 19.2 2.3 3.5 3 0 0 3 3 3 2 Zinc knuckle PHD PF00628.29 NODE_60444_length_273_cov_1.088235_g52504_i0reverse_frame_1 - 0.026 14.4 14.6 0.036 14.0 2.2 2.7 1 1 1 2 2 2 0 PHD-finger zf-CCHC_3 PF13917.6 NODE_60444_length_273_cov_1.088235_g52504_i0reverse_frame_1 - 2.4 8.2 16.5 0.42 10.6 0.7 2.8 2 1 1 3 3 3 0 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_60444_length_273_cov_1.088235_g52504_i0reverse_frame_1 - 8.1 6.4 15.6 15 5.5 0.4 3.5 3 0 0 3 3 3 0 Zinc knuckle Toxin_37 PF11415.8 NODE_60441_length_273_cov_1.159664_g52501_i0reverse_frame_1 - 1 9.2 6.1 0.19 11.6 2.0 1.9 2 0 0 2 2 2 0 Antifungal peptide termicin Topo_Zn_Ribbon PF08272.11 NODE_60437_length_273_cov_1.302521_g52497_i0forward_frame_1 - 0.19 11.4 0.1 0.27 10.9 0.1 1.2 1 0 0 1 1 1 0 Topoisomerase I zinc-ribbon-like Acyltransferase PF01553.21 NODE_60434_length_273_cov_1.336134_g52494_i0reverse_frame_1 - 0.084 12.5 0.2 0.19 11.3 0.1 1.6 1 1 1 2 2 2 0 Acyltransferase UPF0300 PF08594.10 NODE_60433_length_273_cov_1.344538_g52493_i0reverse_frame_1 - 0.13 11.6 2.5 0.15 11.3 2.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) UPF0139 PF03669.13 NODE_60433_length_273_cov_1.344538_g52493_i0reverse_frame_1 - 3.9 7.4 6.0 1.8 8.5 3.8 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0139) p450 PF00067.22 NODE_60427_length_273_cov_1.453782_g52487_i0reverse_frame_1 - 4.7e-07 28.9 0.0 4.9e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 UPF0220 PF05255.11 NODE_60427_length_273_cov_1.453782_g52487_i0reverse_frame_1 - 0.16 11.5 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) TRA-1_regulated PF02343.16 NODE_60420_length_273_cov_1.584034_g52480_i0reverse_frame_1 - 0.46 10.5 4.2 0.65 10.1 4.2 1.3 1 0 0 1 1 1 0 TRA-1 regulated protein R03H10.4 Med31 PF05669.12 NODE_60418_length_273_cov_1.634454_g52478_i0forward_frame_1 - 0.12 12.4 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 SOH1 MNSV_P7B PF06692.11 NODE_60417_length_273_cov_1.668067_g52477_i0reverse_frame_1 - 3.2 7.8 8.2 0.42 10.7 1.8 2.5 2 1 1 3 3 3 0 Melon necrotic spot virus P7B protein Spc24 PF08286.11 NODE_60415_length_273_cov_1.680672_g52475_i0forward_frame_1 - 0.045 14.0 0.4 0.048 13.9 0.4 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 BBIP10 PF14777.6 NODE_60414_length_273_cov_1.701681_g52474_i0reverse_frame_1 - 0.08 12.5 0.4 0.12 11.9 0.4 1.2 1 0 0 1 1 1 0 Cilia BBSome complex subunit 10 DUF5089 PF17002.5 NODE_60399_length_273_cov_1.873950_g52459_i0reverse_frame_1 - 0.11 12.4 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5089) AgrB PF04647.15 NODE_60394_length_273_cov_1.983193_g52454_i0reverse_frame_1 - 0.052 12.9 2.1 0.051 12.9 2.1 1.0 1 0 0 1 1 1 0 Accessory gene regulator B ATG22 PF11700.8 NODE_60393_length_273_cov_2.054622_g52453_i0reverse_frame_1 - 0.00025 19.8 2.5 0.00028 19.7 2.5 1.0 1 0 0 1 1 1 1 Vacuole effluxer Atg22 like DUF3290 PF11694.8 NODE_60393_length_273_cov_2.054622_g52453_i0reverse_frame_1 - 0.012 15.6 1.3 0.014 15.4 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DUF1290 PF06947.12 NODE_60393_length_273_cov_2.054622_g52453_i0reverse_frame_1 - 0.053 13.6 1.7 0.073 13.2 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1290) zinc-ribbons_6 PF07191.12 NODE_60393_length_273_cov_2.054622_g52453_i0forward_frame_1 - 0.011 15.7 2.1 0.014 15.3 2.1 1.2 1 0 0 1 1 1 0 zinc-ribbons Gp_dh_C PF02800.20 NODE_60391_length_273_cov_2.096639_g52451_i0reverse_frame_1 - 0.00053 19.6 0.0 0.00073 19.2 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Herpes_UL24 PF01646.16 NODE_60390_length_273_cov_2.117647_g52450_i0forward_frame_1 - 0.021 14.8 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 Herpes virus proteins UL24 and UL76 Centro_C10orf90 PF17730.1 NODE_60371_length_273_cov_3.126050_g52431_i0reverse_frame_1 - 0.093 11.5 0.0 0.11 11.3 0.0 1.0 1 0 0 1 1 1 0 Centrosomal C10orf90 cNMP_binding PF00027.29 NODE_60369_length_273_cov_3.298319_g52429_i0reverse_frame_1 - 5.9e-08 32.7 0.1 4.4e-06 26.7 0.1 2.1 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain DUF5363 PF17320.2 NODE_60366_length_273_cov_3.449580_g52426_i0reverse_frame_1 - 0.061 13.2 0.3 0.76 9.7 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5363) DUF1201 PF06716.11 NODE_60365_length_273_cov_4.058824_g52425_i0reverse_frame_1 - 4.3 7.4 10.5 0.65 10.1 6.3 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1201) Shisa PF13908.6 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_1 - 0.13 12.5 4.3 0.15 12.3 4.3 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF3043 PF11241.8 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_1 - 4.4 7.3 5.6 4.8 7.2 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF2207 PF09972.9 NODE_60363_length_273_cov_4.432773_g52423_i0reverse_frame_1 - 0.38 9.5 0.7 0.36 9.5 0.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TMEM208_SND2 PF05620.11 NODE_60363_length_273_cov_4.432773_g52423_i0forward_frame_1 - 0.042 13.6 0.7 0.069 12.9 0.6 1.5 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 IL3Ra_N PF18611.1 NODE_60363_length_273_cov_4.432773_g52423_i0forward_frame_1 - 0.17 11.9 4.8 0.25 11.3 4.8 1.4 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain YibE_F PF07907.11 NODE_60350_length_273_cov_41.189076_g52410_i0forward_frame_1 - 0.028 13.9 1.3 0.035 13.6 1.3 1.0 1 0 0 1 1 1 0 YibE/F-like protein Peptidase_A24 PF01478.18 NODE_60350_length_273_cov_41.189076_g52410_i0forward_frame_1 - 0.065 13.7 2.5 0.079 13.4 2.5 1.1 1 0 0 1 1 1 0 Type IV leader peptidase family DUF5414 PF17435.2 NODE_60341_length_273_cov_60.205882_g52401_i0forward_frame_1 - 0.091 12.4 0.7 7.7 6.1 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5414) Nod_GRP PF07806.11 NODE_60337_length_273_cov_68.315126_g52397_i0reverse_frame_1 - 0.7 9.8 17.6 0.62 9.9 10.4 2.5 1 1 1 2 2 2 0 Nodule-specific GRP repeat PepSY_TM PF03929.16 NODE_60337_length_273_cov_68.315126_g52397_i0forward_frame_1 - 0.024 14.3 0.1 0.026 14.2 0.1 1.1 1 0 0 1 1 1 0 PepSY-associated TM region TRAM1 PF08390.11 NODE_60331_length_273_cov_85.848739_g52391_i0reverse_frame_1 - 0.41 10.3 3.2 0.54 10.0 3.2 1.2 1 0 0 1 1 1 0 TRAM1-like protein DUF5084 PF16894.5 NODE_60328_length_273_cov_91.247899_g52388_i0forward_frame_1 - 1.1 9.7 6.4 0.79 10.2 1.7 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5084) ubiquitin PF00240.23 NODE_60325_length_273_cov_105.247899_g52385_i0reverse_frame_1 - 0.14 11.9 0.5 0.2 11.4 0.5 1.4 1 1 0 1 1 1 0 Ubiquitin family TFIIB_C_1 PF18542.1 NODE_60324_length_273_cov_106.500000_g52384_i0reverse_frame_1 - 0.086 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 CarbpepA_inh PF02977.15 NODE_60323_length_273_cov_129.247899_g52383_i0reverse_frame_1 - 0.028 14.2 0.1 0.05 13.4 0.1 1.4 1 0 0 1 1 1 0 Carboxypeptidase A inhibitor zf-RanBP PF00641.18 NODE_60320_length_273_cov_141.113445_g52380_i0forward_frame_1 - 0.1 11.9 2.3 0.18 11.2 2.3 1.4 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DUF2975 PF11188.8 NODE_60316_length_273_cov_176.079832_g52376_i0reverse_frame_1 - 0.15 11.9 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) EPF PF17181.4 NODE_60316_length_273_cov_176.079832_g52376_i0reverse_frame_1 - 0.25 11.4 1.9 0.33 11.0 0.3 1.8 1 1 1 2 2 2 0 Epidermal patterning factor proteins PIP49_C PF12260.8 NODE_60309_length_273_cov_519.247899_g52369_i0forward_frame_1 - 0.05 13.2 0.1 0.054 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 DUF2207 PF09972.9 NODE_60306_length_273_cov_1907.680672_g52366_i0reverse_frame_1 - 0.54 9.0 5.9 0.63 8.7 5.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) RCR PF12273.8 NODE_60306_length_273_cov_1907.680672_g52366_i0reverse_frame_1 - 3.4 8.3 5.6 0.37 11.4 0.8 1.7 1 1 1 2 2 2 0 Chitin synthesis regulation, resistance to Congo red DUF2721 PF11026.8 NODE_60302_length_274_cov_0.895397_g52362_i0forward_frame_2 - 1.3 8.9 9.5 2.1 8.3 9.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) Ndc1_Nup PF09531.10 NODE_60300_length_274_cov_1.075314_g52360_i0forward_frame_2 - 0.42 9.2 4.6 0.45 9.1 4.6 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PLL PF18587.1 NODE_60294_length_274_cov_1.401674_g52354_i0forward_frame_2 - 0.058 13.5 0.5 0.069 13.3 0.5 1.1 1 0 0 1 1 1 0 PTX/LNS-Like (PLL) domain IQ PF00612.27 NODE_60293_length_274_cov_1.414226_g52353_i0reverse_frame_3 - 0.032 14.0 0.1 0.087 12.7 0.1 1.8 1 0 0 1 1 1 0 IQ calmodulin-binding motif SHNi-TPR PF10516.9 NODE_60293_length_274_cov_1.414226_g52353_i0reverse_frame_2 - 0.19 11.2 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 SHNi-TPR Sec23_trunk PF04811.15 NODE_60291_length_274_cov_1.451883_g52351_i0forward_frame_3 - 3.3e-10 39.9 0.1 3.8e-10 39.7 0.1 1.1 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain CSTF_C PF14304.6 NODE_60291_length_274_cov_1.451883_g52351_i0forward_frame_3 - 0.036 13.7 0.0 0.05 13.2 0.0 1.2 1 0 0 1 1 1 0 Transcription termination and cleavage factor C-terminal DUF29 PF01724.16 NODE_60289_length_274_cov_1.502092_g52349_i0forward_frame_2 - 0.034 14.4 0.3 0.041 14.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF29 Chordopox_E11 PF06138.12 NODE_60287_length_274_cov_1.506276_g52347_i0reverse_frame_2 - 0.01 16.2 0.2 0.01 16.2 0.2 1.1 1 0 0 1 1 1 0 Chordopoxvirus E11 protein p450 PF00067.22 NODE_60286_length_274_cov_1.569038_g52346_i0reverse_frame_2 - 2e-11 43.3 0.0 2.5e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Choline_transpo PF04515.12 NODE_60286_length_274_cov_1.569038_g52346_i0reverse_frame_2 - 0.026 13.8 0.2 0.06 12.5 0.2 1.6 1 1 0 1 1 1 0 Plasma-membrane choline transporter Imm30 PF15565.6 NODE_60286_length_274_cov_1.569038_g52346_i0reverse_frame_2 - 0.028 14.5 0.0 0.034 14.2 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 30 Terminase_5 PF06056.12 NODE_60283_length_274_cov_1.623431_g52343_i0forward_frame_3 - 0.095 12.6 0.3 0.28 11.1 0.1 1.9 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) Peptidase_M16_C PF05193.21 NODE_60282_length_274_cov_1.635983_g52342_i0forward_frame_3 - 1.3e-05 25.3 0.0 1.4e-05 25.1 0.0 1.0 1 0 0 1 1 1 1 Peptidase M16 inactive domain VHS PF00790.19 NODE_60282_length_274_cov_1.635983_g52342_i0forward_frame_2 - 8.8e-05 22.4 0.3 0.00013 21.8 0.3 1.2 1 0 0 1 1 1 1 VHS domain Fer4_22 PF17179.4 NODE_60282_length_274_cov_1.635983_g52342_i0forward_frame_2 - 0.47 11.3 18.4 0.066 14.1 13.9 1.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Rick_17kDa_Anti PF05433.15 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_3 - 3e-06 27.0 18.8 4.5e-06 26.4 18.8 1.3 1 0 0 1 1 1 1 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_3 - 0.00067 19.6 15.0 0.00089 19.2 15.0 1.2 1 0 0 1 1 1 1 Glycine zipper DUF2076 PF09849.9 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_3 - 0.12 12.5 9.2 0.21 11.6 9.2 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Gly-zipper_YMGG PF13441.6 NODE_60281_length_274_cov_1.652720_g52341_i0reverse_frame_3 - 0.73 9.6 18.5 1.1 9.1 18.5 1.2 1 0 0 1 1 1 0 YMGG-like Gly-zipper Holin_BlyA PF05102.12 NODE_60279_length_274_cov_1.682008_g52339_i0forward_frame_3 - 0.059 13.3 0.3 0.1 12.6 0.3 1.6 1 1 0 1 1 1 0 holin, BlyA family DUF640 PF04852.12 NODE_60278_length_274_cov_1.711297_g52338_i0reverse_frame_3 - 0.062 13.5 0.1 0.075 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF640) DUF3979 PF13141.6 NODE_60277_length_274_cov_1.719665_g52337_i0reverse_frame_3 - 0.095 13.0 0.5 0.12 12.7 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) ARL2_Bind_BART PF11527.8 NODE_60277_length_274_cov_1.719665_g52337_i0reverse_frame_2 - 0.02 15.0 1.0 0.027 14.6 1.0 1.3 1 0 0 1 1 1 0 The ARF-like 2 binding protein BART Rep_fac_C PF08542.11 NODE_60271_length_274_cov_1.861925_g52331_i0reverse_frame_3 - 0.14 12.6 0.0 0.2 12.1 0.0 1.2 1 0 0 1 1 1 0 Replication factor C C-terminal domain Phage_tail_APC PF16778.5 NODE_60271_length_274_cov_1.861925_g52331_i0reverse_frame_2 - 0.079 12.8 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 Phage tail assembly chaperone protein RSN1_7TM PF02714.15 NODE_60268_length_274_cov_1.962343_g52328_i0reverse_frame_3 - 0.00028 20.3 1.0 0.00032 20.1 1.0 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate TMC PF07810.13 NODE_60268_length_274_cov_1.962343_g52328_i0reverse_frame_3 - 0.0089 16.6 0.1 0.01 16.4 0.1 1.1 1 0 0 1 1 1 1 TMC domain Rap1-DNA-bind PF09197.10 NODE_60268_length_274_cov_1.962343_g52328_i0forward_frame_3 - 0.085 13.5 0.3 0.1 13.2 0.3 1.1 1 0 0 1 1 1 0 Rap1, DNA-binding RRXRR PF14239.6 NODE_60267_length_274_cov_2.158996_g52327_i0forward_frame_2 - 0.076 12.9 5.0 0.09 12.6 5.0 1.1 1 0 0 1 1 1 0 RRXRR protein DUF755 PF05501.11 NODE_60266_length_274_cov_2.179916_g52326_i0forward_frame_2 - 0.24 11.7 4.9 0.31 11.3 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) SR-25 PF10500.9 NODE_60266_length_274_cov_2.179916_g52326_i0forward_frame_2 - 0.3 10.7 4.9 0.35 10.5 4.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4618 PF15397.6 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.012 15.0 9.0 0.018 14.4 9.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) SF3A3 PF16837.5 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.022 15.3 0.4 0.028 14.9 0.4 1.2 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 Fe-ADH PF00465.19 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.033 13.0 0.1 0.039 12.8 0.1 1.1 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase DUF2205 PF10224.9 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.043 13.8 3.6 0.92 9.5 0.1 2.2 2 1 0 2 2 2 0 Short coiled-coil protein CorA PF01544.18 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.14 11.5 1.8 0.16 11.2 1.8 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF4413 PF14372.6 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.15 12.4 3.5 0.79 10.1 0.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4413) DUF5082 PF16888.5 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.17 12.2 6.4 0.2 12.0 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) FapA PF03961.13 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.46 9.0 4.8 0.38 9.3 3.0 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A DUF1151 PF06625.11 NODE_60263_length_274_cov_2.267782_g52323_i0reverse_frame_2 - 0.71 9.8 7.4 3.1 7.8 0.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1151) ADK_lid PF05191.14 NODE_60262_length_274_cov_2.322176_g52322_i0forward_frame_3 - 0.27 11.3 0.7 1 9.4 0.0 2.2 3 0 0 3 3 3 0 Adenylate kinase, active site lid AAA_12 PF13087.6 NODE_60261_length_274_cov_2.322176_g52321_i0forward_frame_3 - 0.012 15.2 1.8 0.015 14.9 1.8 1.1 1 0 0 1 1 1 0 AAA domain HPS3_Mid PF14762.6 NODE_60260_length_274_cov_2.326360_g52320_i0forward_frame_3 - 0.042 12.6 1.9 0.071 11.9 0.6 1.7 1 1 1 2 2 2 0 Hermansky-Pudlak syndrome 3, middle region SUR7 PF06687.12 NODE_60257_length_274_cov_2.451883_g52317_i0reverse_frame_2 - 0.058 13.0 0.3 0.064 12.9 0.3 1.0 1 0 0 1 1 1 0 SUR7/PalI family DUF1639 PF07797.14 NODE_60254_length_274_cov_2.506276_g52314_i0reverse_frame_3 - 2 8.5 5.8 3.1 7.9 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) DUF3452 PF11934.8 NODE_60253_length_274_cov_2.527197_g52313_i0reverse_frame_3 - 0.032 13.8 0.2 0.033 13.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) GNVR PF13807.6 NODE_60253_length_274_cov_2.527197_g52313_i0forward_frame_3 - 1.1e-25 89.3 0.3 1.4e-25 89.0 0.3 1.1 1 0 0 1 1 1 1 G-rich domain on putative tyrosine kinase TOM13 PF08219.11 NODE_60253_length_274_cov_2.527197_g52313_i0forward_frame_3 - 0.064 13.2 0.0 0.085 12.8 0.0 1.3 1 0 0 1 1 1 0 Outer membrane protein TOM13 DUF1932 PF09130.11 NODE_60252_length_274_cov_2.539749_g52312_i0forward_frame_3 - 0.21 11.6 0.1 0.35 10.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) DUF3440 PF11922.8 NODE_60249_length_274_cov_2.673640_g52309_i0reverse_frame_3 - 0.14 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) tRNA-synt_2d PF01409.20 NODE_60245_length_274_cov_2.815900_g52305_i0reverse_frame_2 - 1.2e-34 119.9 0.0 1.3e-34 119.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) Pro_sub2 PF18513.1 NODE_60244_length_274_cov_2.874477_g52304_i0forward_frame_2 - 0.081 13.1 0.1 0.13 12.5 0.1 1.4 1 1 0 1 1 1 0 Prodomain subtilisin 2 DUF1027 PF06265.11 NODE_60241_length_274_cov_2.916318_g52301_i0forward_frame_2 - 0.0019 18.1 0.1 0.016 15.2 0.0 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF1027) TrbM PF07424.11 NODE_60240_length_274_cov_2.941423_g52300_i0reverse_frame_2 - 0.69 9.9 4.2 0.81 9.6 4.2 1.1 1 0 0 1 1 1 0 TrbM DUF2625 PF10946.8 NODE_60236_length_274_cov_3.175732_g52296_i0reverse_frame_3 - 5.1e-34 117.2 0.0 5.5e-34 117.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF2625 YrhC PF14143.6 NODE_60235_length_274_cov_3.205021_g52295_i0forward_frame_2 - 0.082 13.0 1.7 0.093 12.8 0.3 1.8 1 1 1 2 2 2 0 YrhC-like protein tRNA-synt_His PF13393.6 NODE_60234_length_274_cov_3.242678_g52294_i0forward_frame_3 - 0.23 10.7 0.1 0.25 10.6 0.1 1.0 1 0 0 1 1 1 0 Histidyl-tRNA synthetase DUF2673 PF10880.8 NODE_60233_length_274_cov_3.309623_g52293_i0reverse_frame_3 - 0.084 13.0 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2673) Complex1_30kDa PF00329.19 NODE_60231_length_274_cov_3.569038_g52291_i0forward_frame_3 - 0.00033 21.3 0.0 0.0004 21.0 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit N_BRCA1_IG PF16158.5 NODE_60223_length_274_cov_8.393305_g52283_i0reverse_frame_2 - 0.00017 22.3 0.0 0.00022 21.9 0.0 1.2 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene RNA_pol_3_Rpc31 PF11705.8 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.023 15.0 5.1 0.028 14.7 5.1 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 Uso1_p115_C PF04871.13 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.049 14.0 2.2 0.057 13.8 2.2 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Tweety PF04906.13 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.16 10.6 1.2 0.18 10.5 1.2 1.0 1 0 0 1 1 1 0 Tweety PdaC PF13739.6 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.27 12.3 3.7 0.35 11.9 3.8 1.3 1 1 0 1 1 1 0 Deacetylase PdaC LMBR1 PF04791.16 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 0.74 8.6 4.3 0.79 8.6 4.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein YSIRK_signal PF04650.17 NODE_60222_length_274_cov_23.866109_g52282_i0reverse_frame_2 - 2.3 8.1 6.0 12 5.9 0.6 2.6 2 0 0 2 2 2 0 YSIRK type signal peptide Oxidored_q2 PF00420.24 NODE_60222_length_274_cov_23.866109_g52282_i0forward_frame_2 - 0.48 10.1 9.4 0.045 13.4 4.9 1.6 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF1298 PF06974.13 NODE_60221_length_274_cov_38.970711_g52281_i0reverse_frame_2 - 0.083 12.9 0.0 0.097 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1298) Arif-1 PF06770.11 NODE_60219_length_274_cov_46.029289_g52279_i0forward_frame_2 - 2.3 7.8 12.8 2.5 7.7 12.8 1.1 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) Mob_synth_C PF06463.13 NODE_60216_length_274_cov_49.305439_g52276_i0reverse_frame_3 - 0.091 12.7 2.9 0.14 12.1 2.9 1.3 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C Ints3 PF10189.9 NODE_60213_length_274_cov_53.786611_g52273_i0forward_frame_3 - 0.025 13.9 1.0 0.03 13.6 1.0 1.0 1 0 0 1 1 1 0 Integrator complex subunit 3 Toxin_8 PF07365.12 NODE_60211_length_274_cov_57.707113_g52271_i0reverse_frame_3 - 0.053 13.7 2.2 0.088 13.0 2.2 1.5 1 0 0 1 1 1 0 Alpha conotoxin precursor SIS_2 PF13580.6 NODE_60208_length_274_cov_58.598326_g52268_i0reverse_frame_2 - 0.00053 20.0 0.1 0.00066 19.7 0.1 1.1 1 0 0 1 1 1 1 SIS domain PhnH PF05845.12 NODE_60208_length_274_cov_58.598326_g52268_i0reverse_frame_2 - 0.074 12.8 0.0 0.08 12.7 0.0 1.0 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnH) RRXRR PF14239.6 NODE_60208_length_274_cov_58.598326_g52268_i0forward_frame_3 - 0.084 12.7 3.8 0.095 12.6 3.8 1.1 1 0 0 1 1 1 0 RRXRR protein PGG PF13962.6 NODE_60206_length_274_cov_63.071130_g52266_i0reverse_frame_2 - 0.12 12.2 0.2 0.14 11.9 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF1180 PF06679.12 NODE_60205_length_274_cov_63.263598_g52265_i0forward_frame_2 - 0.17 12.3 3.6 0.2 12.1 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) RCC1_2 PF13540.6 NODE_60202_length_274_cov_67.259414_g52262_i0forward_frame_2 - 4.4e-06 26.3 0.1 0.04 13.7 0.0 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Myticin-prepro PF10690.9 NODE_60200_length_274_cov_78.238494_g52260_i0reverse_frame_2 - 0.087 13.1 0.2 0.087 13.1 0.2 1.3 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel DUF1729 PF08354.10 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.0067 15.4 0.7 0.0072 15.3 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1729) CRA PF06589.11 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.011 15.8 1.7 0.013 15.6 1.7 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) DUF3338 PF11819.8 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.041 13.9 3.3 0.052 13.5 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3338) TolA_bind_tri PF16331.5 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.061 13.4 3.9 0.19 11.8 1.9 2.0 1 1 1 2 2 2 0 TolA binding protein trimerisation TMPIT PF07851.13 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.096 11.9 3.7 0.1 11.8 3.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein OmpH PF03938.14 NODE_60199_length_274_cov_79.154812_g52259_i0reverse_frame_2 - 0.1 12.9 7.5 0.12 12.8 7.5 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) EVC2_like PF12297.8 NODE_60199_length_274_cov_79.154812_g52259_i0forward_frame_2 - 1.4 7.5 2.3 1.5 7.4 2.3 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Latarcin PF10279.9 NODE_60198_length_274_cov_79.485356_g52258_i0reverse_frame_3 - 0.00019 21.8 0.3 0.00028 21.2 0.3 1.3 1 0 0 1 1 1 1 Latarcin precursor Gmx_para_CXXCG PF09535.10 NODE_60197_length_274_cov_80.523013_g52257_i0forward_frame_3 - 0.046 13.0 0.1 0.052 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) CNPase PF05881.12 NODE_60196_length_274_cov_86.384937_g52256_i0reverse_frame_3 - 0.07 12.7 0.0 0.073 12.6 0.0 1.0 1 0 0 1 1 1 0 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) Lycopene_cycl PF05834.12 NODE_60196_length_274_cov_86.384937_g52256_i0reverse_frame_2 - 0.24 10.4 0.0 0.26 10.3 0.0 1.0 1 0 0 1 1 1 0 Lycopene cyclase protein TMEM190 PF15431.6 NODE_60192_length_274_cov_92.125523_g52252_i0forward_frame_3 - 0.015 15.4 0.8 0.018 15.2 0.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 190 Fer2 PF00111.27 NODE_60191_length_274_cov_93.171548_g52251_i0reverse_frame_3 - 0.045 13.7 1.6 0.045 13.7 1.6 1.7 2 0 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain PTP_N PF12453.8 NODE_60188_length_274_cov_114.715481_g52248_i0forward_frame_2 - 0.17 11.6 0.2 0.36 10.6 0.2 1.5 1 0 0 1 1 1 0 Protein tyrosine phosphatase N terminal OTT_1508_deam PF14441.6 NODE_60180_length_274_cov_167.732218_g52240_i0reverse_frame_2 - 0.078 13.0 0.4 0.11 12.5 0.4 1.2 1 0 0 1 1 1 0 OTT_1508-like deaminase Oberon_cc PF16312.5 NODE_60178_length_274_cov_183.292887_g52238_i0forward_frame_2 - 0.05 13.5 0.3 0.061 13.3 0.3 1.1 1 0 0 1 1 1 0 Coiled-coil region of Oberon PsiA PF06952.11 NODE_60176_length_274_cov_214.451883_g52236_i0forward_frame_3 - 0.059 12.6 0.1 0.062 12.5 0.1 1.1 1 0 0 1 1 1 0 PsiA protein EB_dh PF09459.10 NODE_60174_length_274_cov_261.832636_g52234_i0forward_frame_2 - 0.11 12.4 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 Ethylbenzene dehydrogenase DUF5316 PF17247.2 NODE_60172_length_274_cov_300.117155_g52232_i0reverse_frame_2 - 0.17 11.9 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5316) ETRAMP PF09716.10 NODE_60172_length_274_cov_300.117155_g52232_i0forward_frame_2 - 0.047 13.8 0.0 0.059 13.4 0.0 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) FCH PF00611.23 NODE_60168_length_274_cov_662.556485_g52228_i0forward_frame_3 - 0.33 11.2 6.3 13 6.2 6.3 2.3 1 1 0 1 1 1 0 Fes/CIP4, and EFC/F-BAR homology domain SOCS_box PF07525.16 NODE_60166_length_274_cov_773.104603_g52226_i0reverse_frame_3 - 0.017 15.5 2.6 0.12 12.7 2.6 2.3 1 1 0 1 1 1 0 SOCS box # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks293.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks293.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks293.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks293.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:13:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2012 PF09430.10 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_3 - 7.6e-05 22.8 0.0 8.8e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2012) Y_Y_Y PF07495.13 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_3 - 0.01 15.8 0.1 0.017 15.1 0.1 1.3 1 0 0 1 1 1 0 Y_Y_Y domain CarboxypepD_reg PF13620.6 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_3 - 0.056 13.7 0.0 0.076 13.3 0.0 1.3 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain SdrD_B PF17210.3 NODE_60165_length_274_cov_1275.953975_g52225_i0reverse_frame_3 - 0.13 12.5 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 SdrD B-like domain Lamprin PF06403.11 NODE_60160_length_275_cov_1.083333_g52220_i0forward_frame_2 - 0.044 13.7 0.4 0.051 13.5 0.4 1.1 1 0 0 1 1 1 0 Lamprin Oxysterol_BP PF01237.18 NODE_60155_length_275_cov_1.300000_g52215_i0reverse_frame_2 - 4.4e-10 38.9 0.1 4.8e-10 38.8 0.1 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein DUF1272 PF06906.11 NODE_60155_length_275_cov_1.300000_g52215_i0forward_frame_3 - 0.074 13.2 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) LcrR PF09621.10 NODE_60153_length_275_cov_1.312500_g52213_i0reverse_frame_3 - 0.14 11.6 0.1 0.21 11.0 0.1 1.4 1 1 0 1 1 1 0 Type III secretion system regulator (LcrR) DUF4439 PF14530.6 NODE_60151_length_275_cov_1.325000_g52211_i0forward_frame_3 - 0.18 12.5 0.0 0.21 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4439) Nic96 PF04097.14 NODE_60150_length_275_cov_1.333333_g52210_i0reverse_frame_3 - 0.024 13.1 0.0 0.024 13.1 0.0 1.2 1 0 0 1 1 1 0 Nup93/Nic96 Vps26 PF03643.15 NODE_60150_length_275_cov_1.333333_g52210_i0forward_frame_2 - 0.14 11.1 0.0 0.15 11.1 0.0 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 26 DUF5068 PF16781.5 NODE_60147_length_275_cov_1.341667_g52207_i0forward_frame_2 - 0.066 13.0 0.5 0.072 12.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5068) Somatomedin_B PF01033.17 NODE_60146_length_275_cov_1.420833_g52206_i0forward_frame_3 - 1.9e-06 28.2 16.3 2.6e-06 27.7 16.3 1.2 1 0 0 1 1 1 1 Somatomedin B domain DUF5361 PF17318.2 NODE_60145_length_275_cov_1.450000_g52205_i0forward_frame_3 - 0.098 12.9 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5361) LINES_C PF14695.6 NODE_60144_length_275_cov_1.454167_g52204_i0forward_frame_3 - 0.15 11.5 2.7 0.27 10.7 2.7 1.4 1 0 0 1 1 1 0 Lines C-terminus zinc_ribbon_12 PF11331.8 NODE_60141_length_275_cov_1.537500_g52201_i0forward_frame_3 - 0.0033 17.2 0.5 0.11 12.4 0.1 2.2 2 0 0 2 2 2 2 Probable zinc-ribbon domain DGOK PF05035.12 NODE_60140_length_275_cov_1.550000_g52200_i0forward_frame_2 - 0.095 11.6 0.0 0.095 11.6 0.0 1.1 1 0 0 1 1 1 0 2-keto-3-deoxy-galactonokinase Ig_3 PF13927.6 NODE_60135_length_275_cov_1.650000_g52195_i0reverse_frame_2 - 0.052 14.2 0.0 0.074 13.7 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin domain CtaG_Cox11 PF04442.14 NODE_60132_length_275_cov_1.737500_g52192_i0forward_frame_3 - 0.0069 16.4 0.4 0.0074 16.3 0.4 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 DUF4203 PF13886.6 NODE_60130_length_275_cov_1.758333_g52190_i0reverse_frame_3 - 1.9e-09 37.5 20.6 2.1e-09 37.3 20.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) CPBP PF02517.16 NODE_60130_length_275_cov_1.758333_g52190_i0reverse_frame_3 - 4.1 7.8 8.8 4.7 7.6 8.8 1.1 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease DUF543 PF04418.12 NODE_60130_length_275_cov_1.758333_g52190_i0reverse_frame_3 - 8.1 6.5 7.2 0.67 10.0 1.0 2.2 1 1 2 3 3 3 0 Domain of unknown function (DUF543) AID PF18767.1 NODE_60130_length_275_cov_1.758333_g52190_i0forward_frame_2 - 0.11 12.5 0.4 0.16 12.0 0.4 1.2 1 0 0 1 1 1 0 Activation induced deaminase NIF PF03031.18 NODE_60126_length_275_cov_1.808333_g52186_i0reverse_frame_2 - 2.6e-25 89.0 0.0 2.9e-25 88.9 0.0 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase HAD PF12710.7 NODE_60126_length_275_cov_1.808333_g52186_i0reverse_frame_2 - 0.0061 17.0 0.0 0.0066 16.9 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF220 PF02713.14 NODE_60116_length_275_cov_2.095833_g52176_i0reverse_frame_3 - 0.093 12.8 1.4 0.14 12.3 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF220 SVM_signal PF12113.8 NODE_60116_length_275_cov_2.095833_g52176_i0reverse_frame_2 - 3.7 7.5 7.5 0.72 9.8 0.8 2.8 3 0 0 3 3 3 0 SVM protein signal sequence RINGv PF12906.7 NODE_60109_length_275_cov_2.450000_g52169_i0forward_frame_2 - 1.8e-11 44.0 2.3 4.4e-11 42.7 2.3 1.7 1 1 0 1 1 1 1 RING-variant domain TMEM208_SND2 PF05620.11 NODE_60106_length_275_cov_2.470833_g52166_i0reverse_frame_2 - 0.048 13.4 0.2 0.061 13.1 0.2 1.0 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 CcmD PF04995.14 NODE_60106_length_275_cov_2.470833_g52166_i0forward_frame_2 - 0.026 14.6 0.8 0.053 13.6 0.8 1.4 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) CoA_binding_3 PF13727.6 NODE_60106_length_275_cov_2.470833_g52166_i0forward_frame_2 - 0.049 13.6 0.0 0.051 13.6 0.0 1.1 1 0 0 1 1 1 0 CoA-binding domain AraC_binding PF02311.19 NODE_60105_length_275_cov_2.550000_g52165_i0reverse_frame_3 - 0.05 13.5 0.1 0.063 13.2 0.1 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain Inhibitor_I36 PF03995.13 NODE_60103_length_275_cov_2.658333_g52163_i0forward_frame_2 - 0.29 11.1 0.2 0.29 11.1 0.2 1.8 2 0 0 2 2 2 0 Peptidase inhibitor family I36 CitMHS PF03600.16 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.0041 16.4 0.2 0.0041 16.4 0.2 1.0 1 0 0 1 1 1 1 Citrate transporter Pex24p PF06398.11 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.027 13.5 0.2 0.029 13.3 0.2 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin UPF0542 PF15086.6 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.041 13.8 0.1 0.056 13.4 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 TMEM208_SND2 PF05620.11 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.07 12.9 0.1 0.081 12.7 0.1 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 Baculo_11_kDa PF06143.11 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.081 12.5 0.1 0.081 12.5 0.1 2.5 1 1 1 2 2 2 0 Baculovirus 11 kDa family DUF2207 PF09972.9 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.096 11.4 1.1 0.11 11.3 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) zf-piccolo PF05715.13 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.1 12.7 1.8 0.16 12.1 1.8 1.4 1 0 0 1 1 1 0 Piccolo Zn-finger PulG PF11773.8 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.12 12.2 1.8 0.3 10.9 1.8 1.7 1 1 0 1 1 1 0 Type II secretory pathway pseudopilin Wzy_C PF04932.15 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.13 11.9 0.4 0.13 11.9 0.4 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF5527 PF17665.1 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.14 11.7 0.4 0.15 11.6 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5527) CAAD PF14159.6 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 0.16 11.8 2.8 0.12 12.2 1.6 1.5 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase TMEM154 PF15102.6 NODE_60102_length_275_cov_2.691667_g52162_i0reverse_frame_3 - 3.5 7.5 6.4 2.7 7.9 5.1 1.6 1 1 0 1 1 1 0 TMEM154 protein family Catalase_C PF18011.1 NODE_60100_length_275_cov_2.766667_g52160_i0forward_frame_2 - 8.6e-09 35.2 0.0 9.9e-09 35.0 0.0 1.0 1 0 0 1 1 1 1 C-terminal domain found in long catalases RNA_pol_Rpb4 PF03874.16 NODE_60099_length_275_cov_2.812500_g52159_i0forward_frame_3 - 0.0019 18.5 0.0 0.0021 18.4 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb4 GCR PF02155.15 NODE_60098_length_275_cov_2.812500_g52158_i0reverse_frame_2 - 0.062 12.3 0.0 0.066 12.2 0.0 1.0 1 0 0 1 1 1 0 Glucocorticoid receptor Bax1-I PF01027.20 NODE_60096_length_275_cov_2.941667_g52156_i0reverse_frame_3 - 0.0059 16.4 2.8 0.0065 16.3 2.8 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Involucrin_N PF10583.9 NODE_60095_length_275_cov_2.987500_g52155_i0reverse_frame_3 - 0.028 15.0 0.0 0.04 14.5 0.0 1.3 1 0 0 1 1 1 0 Involucrin of squamous epithelia N-terminus zinc_ribbon_10 PF10058.9 NODE_60092_length_275_cov_3.045833_g52152_i0reverse_frame_2 - 0.017 14.8 3.4 0.02 14.6 1.9 1.9 2 1 1 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein DUF126 PF01989.16 NODE_60092_length_275_cov_3.045833_g52152_i0reverse_frame_2 - 0.071 12.9 0.4 0.18 11.6 0.2 1.7 1 1 1 2 2 2 0 Aconitase X swivel domain WD40 PF00400.32 NODE_60092_length_275_cov_3.045833_g52152_i0forward_frame_3 - 0.0045 17.8 0.6 0.0083 17.0 0.6 1.5 1 1 0 1 1 1 1 WD domain, G-beta repeat CDC45 PF02724.14 NODE_60092_length_275_cov_3.045833_g52152_i0forward_frame_3 - 0.11 10.8 2.8 0.089 11.1 2.8 1.0 1 0 0 1 1 1 0 CDC45-like protein HATPase_c PF02518.26 NODE_60091_length_275_cov_3.091667_g52151_i0forward_frame_2 - 2.4e-08 34.5 0.0 2.7e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 NODE_60091_length_275_cov_3.091667_g52151_i0forward_frame_2 - 9.4e-07 28.7 0.0 1.1e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 NODE_60091_length_275_cov_3.091667_g52151_i0forward_frame_2 - 0.041 13.9 0.0 0.046 13.7 0.0 1.1 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 NODE_60091_length_275_cov_3.091667_g52151_i0forward_frame_2 - 0.065 13.1 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF5374 PF17344.2 NODE_60089_length_275_cov_3.250000_g52149_i0reverse_frame_2 - 0.045 13.7 0.6 0.076 12.9 0.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5374) ACOX PF01756.19 NODE_60082_length_275_cov_21.654167_g52142_i0forward_frame_2 - 8.7e-09 35.2 0.0 9.9e-09 35.0 0.0 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase DUF5609 PF18429.1 NODE_60080_length_275_cov_25.841667_g52140_i0forward_frame_2 - 0.0096 15.7 0.9 0.014 15.1 0.2 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF5609) Rhamno_transf PF11316.8 NODE_60079_length_275_cov_33.666667_g52139_i0forward_frame_3 - 0.026 13.9 0.1 0.032 13.6 0.1 1.1 1 0 0 1 1 1 0 Putative rhamnosyl transferase Serendipity_A PF05482.12 NODE_60078_length_275_cov_37.441667_g52138_i0forward_frame_3 - 0.013 14.2 0.1 0.016 13.9 0.1 1.0 1 0 0 1 1 1 0 Serendipity locus alpha protein (SRY-A) SCAMP PF04144.13 NODE_60077_length_275_cov_38.958333_g52137_i0forward_frame_3 - 0.18 12.1 13.0 0.22 11.8 13.0 1.1 1 0 0 1 1 1 0 SCAMP family DUF809 PF05663.11 NODE_60077_length_275_cov_38.958333_g52137_i0forward_frame_2 - 2.8 8.1 6.1 2.9 8.1 5.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF809) Herpes_LMP1 PF05297.11 NODE_60077_length_275_cov_38.958333_g52137_i0forward_frame_2 - 5.8 6.0 6.3 6.9 5.7 6.3 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF3916 PF13079.6 NODE_60074_length_275_cov_44.570833_g52134_i0reverse_frame_2 - 0.067 13.1 0.3 0.082 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) HXXEE PF13787.6 NODE_60074_length_275_cov_44.570833_g52134_i0forward_frame_3 - 0.026 15.3 2.1 0.03 15.1 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif DUF4750 PF15938.5 NODE_60074_length_275_cov_44.570833_g52134_i0forward_frame_3 - 0.072 12.8 8.8 0.12 12.1 8.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4750) Presenilin PF01080.17 NODE_60074_length_275_cov_44.570833_g52134_i0forward_frame_3 - 0.16 10.7 6.7 0.19 10.4 6.7 1.0 1 0 0 1 1 1 0 Presenilin DUF4116 PF13475.6 NODE_60068_length_275_cov_50.308333_g52128_i0reverse_frame_3 - 1.1e-11 44.3 0.0 2.1e-07 30.5 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4116) EB PF01683.18 NODE_60068_length_275_cov_50.308333_g52128_i0reverse_frame_2 - 0.96 9.8 7.9 4.9 7.5 7.9 2.2 1 1 0 1 1 1 0 EB module DUF483 PF04467.12 NODE_60066_length_275_cov_52.662500_g52126_i0reverse_frame_3 - 0.036 14.1 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF483) Sfi1_C PF10638.9 NODE_60064_length_275_cov_61.350000_g52124_i0reverse_frame_2 - 0.1 13.4 0.1 0.19 12.5 0.1 1.5 1 1 0 1 1 1 0 Spindle body associated protein C-terminus PRIMA1 PF16101.5 NODE_60057_length_275_cov_70.466667_g52117_i0reverse_frame_2 - 0.057 13.5 0.1 0.077 13.0 0.1 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 RTP1_C2 PF10304.9 NODE_60054_length_275_cov_72.954167_g52114_i0reverse_frame_3 - 0.06 13.0 0.0 0.089 12.5 0.0 1.3 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 2 MAGE_N PF12440.8 NODE_60050_length_275_cov_91.525000_g52110_i0forward_frame_2 - 9.7 7.0 12.8 0.91 10.2 8.1 1.7 2 0 0 2 2 2 0 Melanoma associated antigen family N terminal zf-CXXC PF02008.20 NODE_60049_length_275_cov_101.783333_g52109_i0reverse_frame_3 - 3 7.9 14.7 1.2 9.2 10.6 2.0 2 0 0 2 2 2 0 CXXC zinc finger domain Rab_eff_C PF04698.12 NODE_60048_length_275_cov_113.329167_g52108_i0forward_frame_2 - 0.022 13.1 1.2 0.025 12.9 1.2 1.0 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus Mitochondr_Som1 PF11093.8 NODE_60045_length_275_cov_180.875000_g52105_i0reverse_frame_3 - 0.032 14.2 0.2 0.048 13.7 0.2 1.3 1 0 0 1 1 1 0 Mitochondrial export protein Som1 Corona_NS2A PF05213.12 NODE_60040_length_275_cov_553.475000_g52100_i0reverse_frame_2 - 0.061 12.6 0.7 0.071 12.4 0.7 1.1 1 0 0 1 1 1 0 Coronavirus NS2A protein DUF3846 PF12957.7 NODE_60040_length_275_cov_553.475000_g52100_i0reverse_frame_2 - 0.1 12.9 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3846) TadE PF07811.12 NODE_60040_length_275_cov_553.475000_g52100_i0forward_frame_3 - 0.017 15.4 0.1 0.026 14.8 0.1 1.2 1 0 0 1 1 1 0 TadE-like protein SPC22 PF04573.12 NODE_60040_length_275_cov_553.475000_g52100_i0forward_frame_3 - 0.04 13.4 0.2 0.046 13.2 0.2 1.0 1 0 0 1 1 1 0 Signal peptidase subunit ETRAMP PF09716.10 NODE_60040_length_275_cov_553.475000_g52100_i0forward_frame_3 - 0.073 13.1 0.2 0.076 13.1 0.2 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF2633 PF11119.8 NODE_60040_length_275_cov_553.475000_g52100_i0forward_frame_2 - 0.0022 17.9 0.6 0.0032 17.3 0.6 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2633) AI-2E_transport PF01594.16 NODE_60039_length_275_cov_558.137500_g52099_i0forward_frame_2 - 0.21 10.7 6.0 0.25 10.5 6.0 1.0 1 0 0 1 1 1 0 AI-2E family transporter DUF4548 PF15081.6 NODE_60034_length_276_cov_1.066390_g52094_i0forward_frame_3 - 0.023 14.6 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4548) TILa PF12714.7 NODE_60033_length_276_cov_1.082988_g52093_i0forward_frame_2 - 1.2 9.1 12.4 1.8 8.6 12.4 1.3 1 0 0 1 1 1 0 TILa domain DUF809 PF05663.11 NODE_60030_length_276_cov_1.199170_g52090_i0forward_frame_2 - 0.091 12.9 0.3 0.12 12.5 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Nuc_sug_transp PF04142.15 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 2.1e-08 33.7 0.1 2.5e-08 33.4 0.1 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter CRT-like PF08627.10 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 0.00019 20.5 1.0 0.00023 20.3 1.0 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like EamA PF00892.20 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 0.0009 19.4 4.2 0.001 19.2 4.2 1.1 1 0 0 1 1 1 1 EamA-like transporter family TPT PF03151.16 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 0.0045 16.4 0.6 0.0052 16.2 0.6 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family SdpI PF13630.6 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 0.45 10.7 0.1 0.45 10.7 0.1 2.3 2 1 0 2 2 2 0 SdpI/YhfL protein family TrbC PF04956.13 NODE_60029_length_276_cov_1.236515_g52089_i0forward_frame_3 - 1 9.6 7.2 1.5 9.1 7.2 1.5 1 1 0 1 1 1 0 TrbC/VIRB2 family ASH PF15780.5 NODE_60024_length_276_cov_1.290456_g52084_i0forward_frame_3 - 0.12 12.6 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Rubi_NSP_C PF12601.8 NODE_60023_length_276_cov_1.294606_g52083_i0reverse_frame_3 - 0.021 14.9 0.2 0.035 14.2 0.2 1.3 1 0 0 1 1 1 0 Rubivirus non-structural protein Resistin PF06954.11 NODE_60023_length_276_cov_1.294606_g52083_i0forward_frame_3 - 0.11 13.0 0.2 0.12 12.9 0.2 1.1 1 0 0 1 1 1 0 Resistin Flu_B_NS1 PF02942.14 NODE_60022_length_276_cov_1.315353_g52082_i0reverse_frame_3 - 0.12 11.4 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Influenza B non-structural protein (NS1) Ecm33 PF12454.8 NODE_60021_length_276_cov_1.323651_g52081_i0forward_frame_3 - 0.16 12.2 0.2 0.29 11.3 0.2 1.5 1 0 0 1 1 1 0 GPI-anchored cell wall organization protein HAP1_N PF04849.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 7.8e-05 22.0 8.4 9e-05 21.8 8.4 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region DUF3450 PF11932.8 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.00023 20.5 6.0 0.00024 20.5 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) YabA PF06156.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.0029 18.2 6.6 0.0037 17.9 6.6 1.2 1 0 0 1 1 1 1 Initiation control protein YabA Tup_N PF08581.10 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.0056 16.9 1.0 0.0056 16.9 1.0 2.6 1 1 1 2 2 2 1 Tup N-terminal DUF4618 PF15397.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.01 15.2 8.0 0.014 14.8 8.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) DUF3958 PF13125.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.013 15.7 5.7 0.013 15.7 5.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3958) BRE1 PF08647.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.015 15.4 3.4 0.015 15.4 3.4 2.1 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase Use1 PF09753.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.017 14.8 6.8 0.02 14.6 6.8 1.0 1 0 0 1 1 1 0 Membrane fusion protein Use1 bZIP_1 PF00170.21 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.018 15.1 12.6 0.034 14.2 6.4 2.3 1 1 1 2 2 2 0 bZIP transcription factor TMF_TATA_bd PF12325.8 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.019 15.2 9.5 0.03 14.5 4.1 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Rootletin PF15035.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.02 14.9 6.3 0.025 14.6 6.3 1.2 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion XH PF03469.14 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.034 14.1 2.4 0.039 13.9 2.4 1.2 1 0 0 1 1 1 0 XH domain DUF1615 PF07759.12 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.034 13.3 1.4 0.052 12.8 1.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1615) DUF148 PF02520.17 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.048 13.8 7.6 0.056 13.6 7.6 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF148 Baculo_helicase PF04735.12 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.055 11.0 3.1 0.055 11.0 3.1 1.0 1 0 0 1 1 1 0 Baculovirus DNA helicase DUF4407 PF14362.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.062 12.6 3.1 0.073 12.4 3.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CPSase_L_D3 PF02787.19 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.066 13.6 2.7 0.079 13.3 2.7 1.1 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APG6_N PF17675.1 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.066 13.7 11.4 0.087 13.4 11.4 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF2884 PF11101.8 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.069 12.7 4.9 0.087 12.3 4.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) CEP63 PF17045.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.078 12.9 10.2 0.87 9.4 10.1 1.9 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa GlcNAc-1_reg PF18440.1 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.1 12.8 0.8 0.2 11.9 0.8 1.7 1 1 0 1 1 1 0 Putative GlcNAc-1 phosphotransferase regulatory domain Macoilin PF09726.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.1 11.1 7.1 0.12 10.9 7.1 1.1 1 0 0 1 1 1 0 Macoilin family Sds3 PF08598.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.12 12.4 8.9 0.16 12.0 8.9 1.2 1 0 0 1 1 1 0 Sds3-like Helo_like_N PF17111.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.12 11.7 6.6 0.15 11.4 6.6 1.1 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins DUF1843 PF08898.10 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.13 12.8 3.3 4 8.0 0.6 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1843) Laminin_II PF06009.12 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.13 12.3 7.8 0.17 11.9 7.8 1.2 1 0 0 1 1 1 0 Laminin Domain II Exonuc_VII_L PF02601.15 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.13 11.8 4.9 0.15 11.6 4.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit HIP1_clath_bdg PF16515.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.19 12.3 9.7 0.31 11.7 9.7 1.3 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Retrotrans_gag PF03732.17 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.26 11.6 3.2 1 9.7 2.9 1.9 1 1 0 1 1 1 0 Retrotransposon gag protein GBP_C PF02841.14 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.27 10.6 9.5 0.29 10.5 9.5 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain Jnk-SapK_ap_N PF09744.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.31 11.2 11.5 0.71 10.1 11.5 1.6 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Spc7 PF08317.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.32 9.8 10.6 0.37 9.6 10.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4795 PF16043.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.46 10.1 10.3 0.28 10.8 7.4 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) JAKMIP_CC3 PF16034.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.54 10.2 11.8 1.1 9.2 11.8 1.5 1 1 0 1 1 1 0 JAKMIP CC3 domain UPF0242 PF06785.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.58 10.2 10.7 0.83 9.7 10.7 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4164 PF13747.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.58 10.5 11.4 1.2 9.5 8.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) Prefoldin_2 PF01920.20 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.58 10.1 14.0 0.15 12.0 6.3 2.1 1 1 1 2 2 2 0 Prefoldin subunit Ax_dynein_light PF10211.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.65 9.9 11.6 1.1 9.1 11.6 1.3 1 1 0 1 1 1 0 Axonemal dynein light chain Prominin PF05478.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.7 7.8 4.2 0.78 7.6 4.2 1.0 1 0 0 1 1 1 0 Prominin DUF4535 PF15054.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.7 9.7 2.0 14 5.5 0.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4535) PI3K_P85_iSH2 PF16454.5 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.72 9.4 13.7 0.27 10.8 5.8 1.9 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain M PF02370.16 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.75 10.6 6.7 9.7 7.1 0.1 3.3 3 0 0 3 3 3 0 M protein repeat SPATA24 PF15175.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.77 9.6 11.8 1.1 9.1 5.1 2.0 1 1 1 2 2 2 0 Spermatogenesis-associated protein 24 Cluap1 PF10234.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.86 8.9 12.4 3.4 7.0 12.4 1.8 1 1 0 1 1 1 0 Clusterin-associated protein-1 DUF1192 PF06698.11 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 0.99 9.5 9.5 7.5 6.7 0.9 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1192) Csm1_N PF18504.1 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 1.2 9.5 12.8 3.1 8.2 4.3 2.4 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF641 PF04859.12 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 1.2 9.5 9.5 6 7.2 9.5 1.8 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DivIC PF04977.15 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 1.3 8.9 12.8 2.1 8.2 5.9 2.4 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 1.7 7.8 5.4 2 7.5 5.4 1.2 1 0 0 1 1 1 0 TMPIT-like protein TMF_DNA_bd PF12329.8 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2 8.5 18.5 4.4 7.4 15.0 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding TSC22 PF01166.18 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2 8.8 9.0 1.5 9.2 4.2 2.5 1 1 1 2 2 2 0 TSC-22/dip/bun family Fzo_mitofusin PF04799.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2.1 7.9 6.8 4.7 6.7 6.8 1.6 1 1 0 1 1 1 0 fzo-like conserved region FapA PF03961.13 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2.4 6.7 11.0 2.9 6.4 11.0 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A bZIP_2 PF07716.15 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2.8 8.1 13.1 32 4.7 0.4 3.2 1 1 1 2 2 2 0 Basic region leucine zipper AAA_11 PF13086.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 2.9 7.6 8.1 3.5 7.3 8.1 1.0 1 0 0 1 1 1 0 AAA domain zf-C4H2 PF10146.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 3.9 7.7 10.9 4.6 7.5 10.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein DUF4337 PF14235.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 4.5 7.4 7.0 12 6.0 7.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) Atg14 PF10186.9 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 4.6 6.2 9.7 5.3 6.0 9.7 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LMBR1 PF04791.16 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 5.2 5.9 4.8 5.6 5.7 4.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4140 PF13600.6 NODE_60019_length_276_cov_1.348548_g52079_i0reverse_frame_3 - 8.2 6.9 7.5 1.3e+02 3.1 7.5 2.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF3844 PF12955.7 NODE_60018_length_276_cov_1.373444_g52078_i0forward_frame_3 - 0.0019 18.3 0.7 0.002 18.2 0.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3844) Ank_3 PF13606.6 NODE_60015_length_276_cov_1.464730_g52075_i0reverse_frame_3 - 0.003 17.9 0.1 2.4 9.0 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_2 PF12796.7 NODE_60015_length_276_cov_1.464730_g52075_i0reverse_frame_3 - 0.0066 17.0 0.0 0.0081 16.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_60015_length_276_cov_1.464730_g52075_i0reverse_frame_3 - 0.1 13.2 0.1 6.1 7.5 0.0 2.4 1 1 2 3 3 3 0 Ankyrin repeats (many copies) DUF2830 PF11125.8 NODE_60015_length_276_cov_1.464730_g52075_i0forward_frame_2 - 0.23 11.5 0.1 0.23 11.5 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2830) DUF4522 PF15022.6 NODE_60013_length_276_cov_1.502075_g52073_i0reverse_frame_2 - 0.058 13.7 0.0 0.071 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) WASH-7_mid PF14744.6 NODE_60013_length_276_cov_1.502075_g52073_i0forward_frame_2 - 3.8e-17 62.4 0.2 4.1e-17 62.3 0.2 1.0 1 0 0 1 1 1 1 WASH complex subunit 7 Ta0938 PF11494.8 NODE_60012_length_276_cov_1.514523_g52072_i0reverse_frame_2 - 0.032 14.5 0.7 0.04 14.2 0.7 1.2 1 0 0 1 1 1 0 Ta0938 Gpi1 PF05024.15 NODE_60012_length_276_cov_1.514523_g52072_i0reverse_frame_2 - 0.061 13.4 0.1 0.062 13.4 0.1 1.1 1 0 0 1 1 1 0 N-acetylglucosaminyl transferase component (Gpi1) ETRAMP PF09716.10 NODE_60012_length_276_cov_1.514523_g52072_i0reverse_frame_2 - 0.18 11.9 2.8 0.25 11.4 2.8 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF5473 PF17567.2 NODE_60011_length_276_cov_1.526971_g52071_i0reverse_frame_2 - 0.055 13.8 1.3 0.078 13.3 1.0 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5473) Papo_T_antigen PF02380.15 NODE_60010_length_276_cov_1.535270_g52070_i0reverse_frame_2 - 0.0062 16.7 1.0 0.0099 16.0 1.0 1.4 1 0 0 1 1 1 1 T-antigen specific domain Pdase_C33_assoc PF14756.6 NODE_60010_length_276_cov_1.535270_g52070_i0forward_frame_2 - 0.0027 17.6 0.1 0.0032 17.4 0.1 1.2 1 0 0 1 1 1 1 Peptidase_C33-associated domain DUF1741 PF08427.10 NODE_60004_length_276_cov_1.643154_g52064_i0forward_frame_3 - 0.018 14.7 0.1 0.018 14.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1741) DUF4418 PF14387.6 NODE_60003_length_276_cov_1.651452_g52063_i0reverse_frame_3 - 0.11 12.8 4.7 0.7 10.1 4.7 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4418) Lantibiotic_a PF14867.6 NODE_59996_length_276_cov_1.755187_g52056_i0forward_frame_3 - 1.2 8.9 5.0 10 5.9 5.0 2.2 1 1 0 1 1 1 0 Lantibiotic alpha MNSV_P7B PF06692.11 NODE_59995_length_276_cov_1.755187_g52055_i0forward_frame_3 - 0.28 11.2 6.0 0.22 11.5 1.6 2.1 1 1 1 2 2 2 0 Melon necrotic spot virus P7B protein HNHc_6 PF16784.5 NODE_59995_length_276_cov_1.755187_g52055_i0forward_frame_2 - 0.09 12.3 0.4 0.093 12.3 0.4 1.1 1 0 0 1 1 1 0 Putative HNHc nuclease HypA PF01155.19 NODE_59994_length_276_cov_1.759336_g52054_i0forward_frame_3 - 0.22 11.5 2.8 0.33 11.0 2.8 1.5 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AGH PF17558.2 NODE_59993_length_276_cov_1.771784_g52053_i0forward_frame_2 - 0.098 12.8 0.1 0.13 12.4 0.1 1.2 1 0 0 1 1 1 0 Androgenic gland hormone RMP PF14996.6 NODE_59989_length_276_cov_1.850622_g52049_i0reverse_frame_2 - 0.0059 16.8 0.5 0.0061 16.8 0.5 1.1 1 0 0 1 1 1 1 Retinal Maintenance TAT_signal PF10518.9 NODE_59987_length_276_cov_1.896266_g52047_i0forward_frame_3 - 0.36 10.8 1.6 0.64 10.0 1.6 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Response_reg PF00072.24 NODE_59985_length_276_cov_1.946058_g52045_i0forward_frame_3 - 2.4e-09 37.3 0.0 3.2e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain DUF4520 PF15016.6 NODE_59983_length_276_cov_2.041494_g52043_i0reverse_frame_3 - 0.056 13.5 0.6 0.095 12.8 0.6 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4520) YfdX PF10938.8 NODE_59983_length_276_cov_2.041494_g52043_i0reverse_frame_2 - 4.5e-10 39.6 0.1 4.5e-10 39.6 0.1 1.8 2 0 0 2 2 2 1 YfdX protein TarH PF02203.15 NODE_59983_length_276_cov_2.041494_g52043_i0reverse_frame_2 - 0.0028 17.6 2.2 0.0034 17.3 2.2 1.1 1 0 0 1 1 1 1 Tar ligand binding domain homologue Alpha_E1_glycop PF01589.16 NODE_59983_length_276_cov_2.041494_g52043_i0forward_frame_3 - 1.4 7.5 4.1 1.6 7.3 4.1 1.1 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein Cys_rich_KTR PF14205.6 NODE_59982_length_276_cov_2.091286_g52042_i0reverse_frame_2 - 0.064 13.1 0.3 0.097 12.5 0.3 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR GDE_C PF06202.14 NODE_59979_length_276_cov_2.116183_g52039_i0reverse_frame_2 - 0.009 15.0 0.3 0.009 15.0 0.3 1.0 1 0 0 1 1 1 1 Amylo-alpha-1,6-glucosidase FANCI_S1-cap PF14674.6 NODE_59978_length_276_cov_2.149378_g52038_i0reverse_frame_2 - 0.58 10.3 3.3 1.6 8.9 0.3 2.3 2 0 0 2 2 2 0 FANCI solenoid 1 cap CCB1 PF12046.8 NODE_59978_length_276_cov_2.149378_g52038_i0forward_frame_2 - 0.11 11.8 0.5 0.16 11.3 0.5 1.2 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B DUF2149 PF09919.9 NODE_59977_length_276_cov_2.178423_g52037_i0forward_frame_2 - 0.3 11.4 1.5 0.34 11.2 0.7 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2149) Sarcoglycan_1 PF04790.13 NODE_59975_length_276_cov_2.232365_g52035_i0forward_frame_3 - 0.16 11.3 0.4 0.15 11.4 0.4 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein Glycos_transf_1 PF00534.20 NODE_59974_length_276_cov_2.302905_g52034_i0forward_frame_3 - 6.2e-11 42.1 0.0 7.7e-11 41.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 NODE_59974_length_276_cov_2.302905_g52034_i0forward_frame_3 - 0.0007 20.0 0.0 0.001 19.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Pas_Saposin PF09016.10 NODE_59974_length_276_cov_2.302905_g52034_i0forward_frame_3 - 0.074 13.4 0.0 0.14 12.5 0.0 1.5 1 1 0 1 1 1 0 Pas factor saposin fold NEMO PF11577.8 NODE_59971_length_276_cov_2.385892_g52031_i0forward_frame_2 - 0.0083 16.1 1.3 0.011 15.7 1.3 1.1 1 0 0 1 1 1 1 NF-kappa-B essential modulator NEMO PknH_C PF14032.6 NODE_59970_length_276_cov_2.398340_g52030_i0reverse_frame_2 - 0.066 13.1 0.0 0.074 12.9 0.0 1.1 1 0 0 1 1 1 0 PknH-like extracellular domain Colicin_im PF03857.13 NODE_59964_length_276_cov_2.672199_g52024_i0forward_frame_2 - 0.011 15.7 3.3 0.013 15.5 3.3 1.1 1 0 0 1 1 1 0 Colicin immunity protein SCAI PF12070.8 NODE_59963_length_276_cov_2.721992_g52023_i0reverse_frame_2 - 0.017 14.0 4.4 0.019 13.9 4.4 1.1 1 0 0 1 1 1 0 Protein SCAI Thioredoxin_7 PF13899.6 NODE_59960_length_276_cov_2.788382_g52020_i0forward_frame_2 - 0.015 15.5 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like DUF508 PF04370.12 NODE_59956_length_276_cov_2.991701_g52016_i0reverse_frame_3 - 0.32 10.7 2.1 0.37 10.5 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF508) HSBP1 PF06825.12 NODE_59954_length_276_cov_3.165975_g52014_i0forward_frame_2 - 0.36 10.7 0.4 0.36 10.7 0.4 1.8 2 0 0 2 2 2 0 Heat shock factor binding protein 1 Malate_synthase PF01274.22 NODE_59953_length_276_cov_3.186722_g52013_i0reverse_frame_2 - 1.2e-35 122.8 0.1 1.3e-35 122.7 0.1 1.0 1 0 0 1 1 1 1 Malate synthase EFG_II PF14492.6 NODE_59952_length_276_cov_3.286307_g52012_i0reverse_frame_2 - 0.0075 16.3 0.6 0.0096 16.0 0.6 1.2 1 0 0 1 1 1 1 Elongation Factor G, domain II DUF4460 PF14687.6 NODE_59952_length_276_cov_3.286307_g52012_i0reverse_frame_2 - 0.0084 16.2 3.0 0.0094 16.0 2.9 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4460) HOK_GEF PF01848.16 NODE_59951_length_276_cov_3.348548_g52011_i0forward_frame_2 - 1.2e-20 72.6 1.4 1.5e-20 72.3 1.4 1.1 1 0 0 1 1 1 1 Hok/gef family DUF3149 PF11346.8 NODE_59951_length_276_cov_3.348548_g52011_i0forward_frame_2 - 0.1 12.2 0.7 0.21 11.2 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) DUF3656 PF12392.8 NODE_59950_length_276_cov_3.526971_g52010_i0forward_frame_2 - 1.7e-14 54.4 0.0 1.9e-14 54.2 0.0 1.0 1 0 0 1 1 1 1 Collagenase Phage_Gp23 PF10669.9 NODE_59947_length_276_cov_4.547718_g52007_i0forward_frame_3 - 0.021 15.2 0.3 0.032 14.6 0.3 1.2 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) KASH PF10541.9 NODE_59947_length_276_cov_4.547718_g52007_i0forward_frame_2 - 0.15 12.3 1.2 0.15 12.3 1.2 1.8 1 1 1 2 2 2 0 Nuclear envelope localisation domain cNMP_binding PF00027.29 NODE_59943_length_276_cov_20.128631_g52003_i0reverse_frame_2 - 1.7e-10 40.8 0.0 2.6e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain O-antigen_lig PF13425.6 NODE_59942_length_276_cov_33.663900_g52002_i0forward_frame_3 - 0.068 11.9 1.4 0.076 11.8 1.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Pap_E4 PF02711.14 NODE_59942_length_276_cov_33.663900_g52002_i0forward_frame_2 - 0.36 11.8 4.4 0.47 11.4 4.4 1.2 1 0 0 1 1 1 0 E4 protein SR-25 PF10500.9 NODE_59941_length_276_cov_47.489627_g52001_i0reverse_frame_2 - 4 7.0 6.8 3.7 7.1 6.8 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein EGF PF00008.27 NODE_59935_length_276_cov_55.655602_g51995_i0forward_frame_3 - 0.026 14.8 0.3 0.026 14.8 0.3 1.6 2 0 0 2 2 2 0 EGF-like domain Hist_rich_Ca-bd PF10529.9 NODE_59934_length_276_cov_59.589212_g51994_i0forward_frame_2 - 0.3 11.3 2.8 0.51 10.6 2.8 1.4 1 0 0 1 1 1 0 Histidine-rich Calcium-binding repeat region zinc_ribbon_9 PF14369.6 NODE_59931_length_276_cov_61.892116_g51991_i0forward_frame_2 - 0.053 13.8 0.8 0.11 12.8 0.8 1.5 1 0 0 1 1 1 0 zinc-ribbon zf-C6H2 PF15801.5 NODE_59931_length_276_cov_61.892116_g51991_i0forward_frame_2 - 1.7 9.0 8.1 3.9 7.9 4.1 2.2 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding DUF4995 PF16386.5 NODE_59928_length_276_cov_63.730290_g51988_i0reverse_frame_3 - 0.1 12.6 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function Qua1 PF16274.5 NODE_59925_length_276_cov_65.518672_g51985_i0reverse_frame_3 - 0.14 12.0 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Qua1 domain TORC_M PF12885.7 NODE_59925_length_276_cov_65.518672_g51985_i0forward_frame_2 - 0.032 14.1 0.2 0.044 13.7 0.2 1.2 1 0 0 1 1 1 0 Transducer of regulated CREB activity middle domain Plasmid_stab_B PF10784.9 NODE_59922_length_276_cov_67.900415_g51982_i0reverse_frame_3 - 0.16 11.9 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 Plasmid stability protein Pam17 PF08566.10 NODE_59919_length_276_cov_71.614108_g51979_i0forward_frame_3 - 0.059 13.2 0.0 0.065 13.1 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial import protein Pam17 CBM_14 PF01607.24 NODE_59917_length_276_cov_73.248963_g51977_i0reverse_frame_2 - 0.0015 18.6 3.7 0.26 11.5 0.3 2.4 2 1 0 2 2 2 2 Chitin binding Peritrophin-A domain FXa_inhibition PF14670.6 NODE_59917_length_276_cov_73.248963_g51977_i0reverse_frame_2 - 0.1 12.9 0.9 0.1 12.9 0.9 2.4 2 1 0 2 2 2 0 Coagulation Factor Xa inhibitory site EGF PF00008.27 NODE_59917_length_276_cov_73.248963_g51977_i0reverse_frame_2 - 2.7 8.4 8.4 3.8 7.9 0.3 3.1 3 1 0 3 3 3 0 EGF-like domain TM231 PF10149.9 NODE_59912_length_276_cov_77.912863_g51972_i0reverse_frame_3 - 0.062 12.6 0.0 0.068 12.5 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 Sars6 PF12133.8 NODE_59912_length_276_cov_77.912863_g51972_i0forward_frame_2 - 0.043 13.7 0.5 0.071 13.0 0.5 1.3 1 0 0 1 1 1 0 Open reading frame 6 from SARS coronavirus GCH_III PF05165.12 NODE_59910_length_276_cov_79.307054_g51970_i0forward_frame_3 - 0.032 13.5 0.1 0.035 13.4 0.1 1.0 1 0 0 1 1 1 0 GTP cyclohydrolase III LRR_5 PF13306.6 NODE_59909_length_276_cov_80.867220_g51969_i0forward_frame_3 - 0.0044 17.0 0.2 0.0045 16.9 0.2 1.3 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) DUF4152 PF13680.6 NODE_59909_length_276_cov_80.867220_g51969_i0forward_frame_3 - 0.029 13.8 0.0 0.03 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4152) ETRAMP PF09716.10 NODE_59908_length_276_cov_81.443983_g51968_i0forward_frame_3 - 0.94 9.6 3.4 1.4 9.0 3.2 1.6 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Nodulin_late PF07127.11 NODE_59908_length_276_cov_81.443983_g51968_i0forward_frame_2 - 0.036 14.4 0.6 0.16 12.3 0.2 1.9 1 1 1 2 2 2 0 Late nodulin protein Calici_MSP PF05752.11 NODE_59908_length_276_cov_81.443983_g51968_i0forward_frame_2 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Calicivirus minor structural protein DUF3599 PF12206.8 NODE_59905_length_276_cov_92.688797_g51965_i0reverse_frame_2 - 0.067 13.6 0.0 0.078 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3599) RasGAP_C PF03836.15 NODE_59904_length_276_cov_97.020747_g51964_i0reverse_frame_2 - 0.0086 16.2 4.2 0.0097 16.1 4.2 1.0 1 0 0 1 1 1 1 RasGAP C-terminus HHV6-IE PF03753.13 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_3 - 0.16 9.4 9.3 0.18 9.2 9.3 1.0 1 0 0 1 1 1 0 Human herpesvirus 6 immediate early protein DUF4820 PF16091.5 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_3 - 2.7 7.3 9.0 2.9 7.2 9.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) GCIP PF13324.6 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 0.083 12.5 3.5 0.082 12.5 3.5 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting Radial_spoke PF04712.12 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 0.096 11.6 4.8 0.085 11.8 4.8 1.0 1 0 0 1 1 1 0 Radial spokehead-like protein SDA1 PF05285.12 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 0.24 10.8 6.1 0.2 11.0 6.1 1.1 1 0 0 1 1 1 0 SDA1 CDC45 PF02724.14 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 0.49 8.6 5.1 0.4 8.9 5.1 1.0 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 1 7.5 9.6 1 7.5 9.6 1.0 1 0 0 1 1 1 0 Nop14-like family Sporozoite_P67 PF05642.11 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 1.3 7.0 4.8 1.2 7.1 4.8 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Cwf_Cwc_15 PF04889.12 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 1.4 8.6 12.8 1.5 8.5 12.8 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein PBP1_TM PF14812.6 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 1.6 9.1 10.0 2.4 8.6 10.0 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Sigma70_ner PF04546.13 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 3 7.7 10.0 3.2 7.6 10.0 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region PTPRCAP PF15713.5 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 3.3 8.0 11.8 4.4 7.6 11.8 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated DNA_pol_phi PF04931.13 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 4.1 5.4 15.3 4.3 5.3 15.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi CENP-B_dimeris PF09026.10 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 5.1 7.5 19.6 6.6 7.2 19.6 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DUF4611 PF15387.6 NODE_59901_length_276_cov_123.991701_g51961_i0reverse_frame_2 - 8.7 6.6 12.9 14 6.0 12.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) SCAMP PF04144.13 NODE_59901_length_276_cov_123.991701_g51961_i0forward_frame_3 - 0.93 9.8 15.4 1.2 9.5 15.4 1.1 1 0 0 1 1 1 0 SCAMP family Herpes_LMP1 PF05297.11 NODE_59901_length_276_cov_123.991701_g51961_i0forward_frame_3 - 9.6 5.3 9.7 10 5.2 9.7 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) EURL PF06937.11 NODE_59900_length_276_cov_125.842324_g51960_i0forward_frame_3 - 0.2 11.1 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 EURL protein UPF1_Zn_bind PF09416.10 NODE_59897_length_276_cov_134.614108_g51957_i0reverse_frame_3 - 0.061 13.3 0.5 0.062 13.3 0.5 1.1 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) DUF1624 PF07786.12 NODE_59894_length_276_cov_160.132780_g51954_i0reverse_frame_3 - 0.0041 16.7 3.6 0.0048 16.5 3.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) DUF4714 PF15833.5 NODE_59894_length_276_cov_160.132780_g51954_i0reverse_frame_2 - 0.32 10.9 1.9 0.28 11.1 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) DUF4801 PF16059.5 NODE_59894_length_276_cov_160.132780_g51954_i0reverse_frame_2 - 5 7.2 8.2 14 5.7 1.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4801) SRA1 PF07304.11 NODE_59894_length_276_cov_160.132780_g51954_i0forward_frame_3 - 0.02 14.7 0.5 0.023 14.5 0.5 1.1 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) DUF326 PF03860.16 NODE_59893_length_276_cov_174.759336_g51953_i0forward_frame_3 - 0.18 11.9 1.3 0.18 11.9 1.3 2.5 2 0 0 2 2 2 0 Domain of Unknown Function (DUF326) Ribosomal_60s PF00428.19 NODE_59890_length_276_cov_198.410788_g51950_i0forward_frame_2 - 0.19 12.4 3.8 0.3 11.7 3.3 1.5 2 0 0 2 2 2 0 60s Acidic ribosomal protein RPAP2_Rtr1 PF04181.13 NODE_59884_length_276_cov_1215.871369_g51944_i0forward_frame_3 - 0.052 13.9 0.6 0.07 13.5 0.6 1.2 1 0 0 1 1 1 0 Rtr1/RPAP2 family DUF2845 PF11006.8 NODE_59884_length_276_cov_1215.871369_g51944_i0forward_frame_3 - 0.13 12.4 0.2 0.17 12.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2845) Pkinase PF00069.25 ORF99847 - 7.5e-08 32.0 0.4 7.8e-08 32.0 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Seadorna_VP7 PF07387.11 ORF99847 - 0.033 13.2 0.5 0.038 13.1 0.5 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Pox_ser-thr_kin PF05445.11 ORF99847 - 0.042 12.8 0.6 0.043 12.8 0.6 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Kdo PF06293.14 ORF99847 - 0.056 12.8 0.1 0.067 12.5 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF99847 - 0.15 12.0 0.2 0.21 11.5 0.2 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF99847 - 0.16 10.7 0.1 0.14 10.9 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase Holin_9 PF16936.5 ORF99843 - 0.0064 16.6 1.7 0.009 16.1 1.7 1.3 1 0 0 1 1 1 1 Putative holin DUF2838 PF10998.8 ORF99843 - 0.019 15.2 4.0 0.024 14.9 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) PhoR PF11808.8 ORF99843 - 2 8.9 3.8 3.2 8.2 3.8 1.4 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR DUF3734 PF12536.8 ORF98156 - 0.013 15.9 0.8 0.018 15.4 0.8 1.3 1 0 0 1 1 1 0 Patatin phospholipase DUF883 PF05957.13 ORF98156 - 0.019 15.6 0.9 0.021 15.4 0.9 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) TAN PF11640.8 ORF98156 - 0.034 14.3 0.4 0.042 14.0 0.4 1.0 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair Ras PF00071.22 ORF98156 - 0.07 12.7 0.0 0.099 12.2 0.0 1.2 1 0 0 1 1 1 0 Ras family VCX_VCY PF15231.6 ORF95436 - 0.15 12.7 0.7 0.19 12.4 0.7 1.1 1 0 0 1 1 1 0 Variable charge X/Y family RNA_POL_M_15KD PF02150.16 ORF95349 - 0.11 12.4 0.5 0.11 12.4 0.5 1.7 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit PTA_PTB PF01515.19 ORF95328 - 1.9e-24 86.6 0.0 2.4e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase zf-4CXXC_R1 PF10497.9 ORF95304 - 0.018 15.2 1.3 0.026 14.7 1.3 1.3 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Hira PF07569.11 ORF94909 - 0.11 12.2 0.7 0.14 11.8 0.7 1.1 1 0 0 1 1 1 0 TUP1-like enhancer of split Mito_carr PF00153.27 ORF94716 - 1.8e-18 66.3 0.0 2e-18 66.1 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein CFEM PF05730.11 ORF94694 - 0.02 15.0 0.6 0.024 14.7 0.1 1.5 2 0 0 2 2 2 0 CFEM domain TBPIP PF07106.13 ORF94694 - 0.05 13.5 0.0 0.08 12.9 0.0 1.3 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain Molydop_binding PF01568.21 ORF94558 - 4.7e-25 87.8 0.0 5.3e-25 87.6 0.0 1.0 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Syntaxin-6_N PF09177.11 ORF94239 - 0.046 14.3 6.5 0.074 13.6 6.5 1.3 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Fib_alpha PF08702.10 ORF94239 - 0.29 11.3 8.6 0.36 11.0 8.6 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family MetOD2 PF18548.1 ORF94239 - 0.54 10.4 9.9 0.063 13.4 1.8 2.0 1 1 1 2 2 2 0 Metanogen output domain 2 FapA PF03961.13 ORF94239 - 0.69 8.4 12.5 0.72 8.4 12.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 ORF94239 - 1.3 8.0 9.9 1.4 7.9 9.9 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YtxH PF12732.7 ORF94239 - 4.5 7.9 6.9 21 5.7 6.9 1.9 1 1 0 1 1 1 0 YtxH-like protein CMV_1a PF12467.8 ORF93362 - 0.054 13.8 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein family DUF4769 PF15992.5 ORF93171 - 0.01 15.7 2.0 0.01 15.7 2.0 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4769) MtlR PF05068.12 ORF93039 - 0.0039 17.2 0.2 0.0055 16.7 0.2 1.3 1 0 0 1 1 1 1 Mannitol repressor DUF4446 PF14584.6 ORF93039 - 0.23 11.4 3.0 0.28 11.1 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) MtrG PF04210.13 ORF93039 - 0.33 10.8 2.1 0.25 11.2 0.7 1.5 2 0 0 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G XhlA PF10779.9 ORF93039 - 0.6 10.4 5.0 0.18 12.1 1.9 1.6 2 0 0 2 2 2 0 Haemolysin XhlA TMEM18 PF14770.6 ORF92258 - 0.33 10.9 4.0 0.4 10.7 4.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 DUF1298 PF06974.13 ORF91453 - 0.0023 17.9 0.0 0.0028 17.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Prenyltrans PF00432.21 ORF90716 - 0.016 14.9 0.2 0.027 14.2 0.2 1.3 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat Keratin_assoc PF09775.9 ORF90716 - 0.024 14.3 2.4 0.03 14.0 1.8 1.5 1 1 0 1 1 1 0 Keratinocyte-associated protein 2 Aldo_ket_red PF00248.21 ORF90272 - 1.4e-15 57.3 0.0 1.6e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks294.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks294.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks294.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks294.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Rdx PF10262.9 ORF89690 - 4.8e-10 39.5 0.0 5.3e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Rdx family Rsm1 PF08600.10 ORF89498 - 0.056 13.6 2.8 0.099 12.8 2.8 1.5 1 1 0 1 1 1 0 Rsm1-like MMS22L_N PF14910.6 ORF89185 - 0.46 8.9 4.6 0.42 9.0 4.6 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal Rdx PF10262.9 ORF89040 - 4.8e-10 39.5 0.0 5.3e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Rdx family CBM_1 PF00734.18 ORF88252 - 0.14 12.1 0.2 0.22 11.5 0.2 1.3 1 0 0 1 1 1 0 Fungal cellulose binding domain DUF1471 PF07338.13 ORF88049 - 2.8e-19 68.8 0.2 4.1e-19 68.3 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) Trypan_PARP PF05887.11 ORF88049 - 0.12 12.3 0.2 0.18 11.8 0.1 1.3 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) MMS22L_N PF14910.6 ORF87495 - 0.46 8.9 4.6 0.42 9.0 4.6 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal PHM7_cyt PF14703.6 ORF86482 - 0.02 15.1 0.1 0.023 14.9 0.1 1.0 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter DUF4728 PF15860.5 ORF86245 - 0.034 14.8 6.6 0.042 14.5 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4728) SID-1_RNA_chan PF13965.6 ORF86245 - 0.19 10.1 5.0 0.22 9.9 5.0 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 SieB PF14163.6 ORF86245 - 4 6.9 8.1 4.7 6.7 8.1 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B zf-RING_13 PF17977.1 ORF86233 - 2.6 8.3 15.3 12 6.1 15.3 1.9 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Secapin PF17521.2 ORF857 - 0.021 14.6 0.5 3.1 7.6 0.1 2.2 2 0 0 2 2 2 0 Honey bee peptides DUF5433 PF17498.2 ORF8513 - 0.084 13.1 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5433) OrfB_Zn_ribbon PF07282.11 ORF84905 - 2.5 8.1 6.5 4.4 7.3 6.5 1.5 1 1 0 1 1 1 0 Putative transposase DNA-binding domain DUF2951 PF11166.8 ORF84372 - 1.8 8.8 6.7 1.4 9.1 4.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2951) Ion_trans PF00520.31 ORF84080 - 0.00029 20.2 3.6 0.00034 19.9 3.6 1.0 1 0 0 1 1 1 1 Ion transport protein GxGYxYP_N PF16216.5 ORF84080 - 0.13 12.4 0.0 0.15 12.2 0.0 1.0 1 0 0 1 1 1 0 GxGYxY sequence motif in domain of unknown function N-terminal Glu_cyclase_2 PF05096.12 ORF8311 - 0.12 11.8 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Glutamine cyclotransferase OxoGdeHyase_C PF16870.5 ORF82927 - 3.2e-13 49.6 0.2 3.6e-13 49.5 0.2 1.0 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal PLDc_2 PF13091.6 ORF82927 - 0.063 13.2 0.2 0.071 13.0 0.2 1.1 1 0 0 1 1 1 0 PLD-like domain Pentapeptide_4 PF13599.6 ORF81913 - 0.051 13.8 6.2 0.077 13.2 6.2 1.3 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) UT PF03253.14 ORF80802 - 0.039 13.1 1.0 0.047 12.8 1.0 1.1 1 0 0 1 1 1 0 Urea transporter DUF4006 PF13179.6 ORF80240 - 0.026 14.5 3.7 0.041 13.8 3.7 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF4006) Claudin_3 PF06653.11 ORF80240 - 0.15 12.0 16.1 0.18 11.8 16.0 1.3 1 1 0 1 1 1 0 Tight junction protein, Claudin-like Peptidase_C97 PF05903.14 ORF79439 - 0.13 12.1 0.8 0.23 11.3 0.8 1.4 1 0 0 1 1 1 0 PPPDE putative peptidase domain ABC2_membrane PF01061.24 ORF79367 - 1.5 8.2 14.2 1.7 8.0 14.2 1.1 1 0 0 1 1 1 0 ABC-2 type transporter IES5 PF17335.2 ORF79319 - 0.015 15.6 0.1 0.017 15.4 0.1 1.1 1 0 0 1 1 1 0 Ino80 complex subunit 5 Put_Phosphatase PF06888.12 ORF79315 - 0.002 17.6 0.2 0.0021 17.5 0.2 1.1 1 0 0 1 1 1 1 Putative Phosphatase SRP72 PF08492.12 ORF78556 - 1.4e-11 44.7 10.3 1.4e-11 44.7 10.3 1.9 2 1 1 3 3 3 1 SRP72 RNA-binding domain CECR6_TMEM121 PF14997.6 ORF77969 - 0.017 15.0 2.7 0.018 14.8 2.7 1.1 1 0 0 1 1 1 0 CECR6/TMEM121 family DUF4131 PF13567.6 ORF77627 - 0.031 13.9 0.0 0.041 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) NosL PF05573.12 ORF75997 - 0.028 14.8 0.1 0.038 14.3 0.1 1.3 1 1 0 1 1 1 0 NosL DUF4672 PF15716.5 ORF75855 - 0.082 12.5 0.3 0.083 12.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) GP63 PF17471.2 ORF74578 - 0.052 13.7 0.1 0.084 13.0 0.1 1.4 1 0 0 1 1 1 0 Gene product 63 SNAP PF14938.6 ORF74469 - 1.7e-13 50.6 1.6 1.8e-13 50.5 1.6 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP TPR_12 PF13424.6 ORF74469 - 0.017 15.4 0.2 0.17 12.2 0.2 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat SH3BP5 PF05276.14 ORF74469 - 0.087 12.6 0.2 0.09 12.6 0.2 1.1 1 0 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) Death_2 PF14786.6 ORF74469 - 0.12 12.3 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Tube Death domain Copper-fist PF00649.18 ORF73547 - 0.078 12.5 0.5 0.078 12.5 0.5 2.2 3 0 0 3 3 3 0 Copper fist DNA binding domain RP854 PF17460.2 ORF73547 - 0.71 9.6 0.0 0.71 9.6 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein RP854 Sulfatase_C PF14707.6 ORF72065 - 0.022 15.5 0.1 0.027 15.2 0.1 1.2 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase bZIP_1 PF00170.21 ORF71819 - 8.2e-08 32.2 3.8 1.1e-07 31.8 3.8 1.1 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF71819 - 1.4e-06 28.2 1.1 1.8e-06 27.9 1.1 1.1 1 0 0 1 1 1 1 Basic region leucine zipper Copper-fist PF00649.18 ORF71610 - 0.078 12.5 0.5 0.078 12.5 0.5 2.2 3 0 0 3 3 3 0 Copper fist DNA binding domain RP854 PF17460.2 ORF71610 - 0.71 9.6 0.0 0.71 9.6 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein RP854 PH_18 PF18469.1 ORF70578 - 0.043 13.8 0.1 0.058 13.4 0.1 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain TetR_C_29 PF17938.1 ORF70084 - 0.083 13.0 0.9 0.13 12.4 0.7 1.3 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain GMC_oxred_C PF05199.13 ORF69563 - 4e-12 46.9 0.0 4.2e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 GMC oxidoreductase PocR PF10114.9 ORF69133 - 0.025 14.4 0.0 0.027 14.2 0.0 1.1 1 0 0 1 1 1 0 Sensory domain found in PocR ABC2_membrane PF01061.24 ORF67982 - 0.00037 20.0 0.7 0.00037 20.0 0.7 1.8 2 0 0 2 2 2 1 ABC-2 type transporter Ion_trans PF00520.31 ORF67982 - 0.0037 16.5 0.0 0.0044 16.3 0.0 1.1 1 0 0 1 1 1 1 Ion transport protein LPD25 PF18840.1 ORF66802 - 0.0036 17.8 0.8 0.005 17.4 0.8 1.2 1 0 0 1 1 1 1 Large polyvalent protein associated domain 25 KIND PF16474.5 ORF66802 - 0.0082 16.1 0.5 0.012 15.5 0.5 1.2 1 0 0 1 1 1 1 Kinase non-catalytic C-lobe domain Phosducin PF02114.16 ORF66802 - 1.5 7.7 7.3 1.5 7.7 7.3 1.0 1 0 0 1 1 1 0 Phosducin AAA_23 PF13476.6 ORF66802 - 6.7 7.2 11.4 7.7 7.0 11.4 1.0 1 0 0 1 1 1 0 AAA domain Tudor_FRX1 PF18336.1 ORF66526 - 0.053 13.4 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Fragile X mental retardation Tudor domain MscL PF01741.18 ORF65872 - 0.078 13.3 0.1 0.078 13.3 0.1 1.1 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL TMF_DNA_bd PF12329.8 ORF65505 - 0.0088 16.0 0.7 0.0088 16.0 0.7 2.1 3 0 0 3 3 3 1 TATA element modulatory factor 1 DNA binding DUF5344 PF17279.2 ORF65505 - 0.027 15.0 1.6 0.035 14.7 0.6 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5344) Strep_SA_rep PF06696.11 ORF65505 - 0.051 13.6 5.4 0.2 11.7 0.6 2.3 2 0 0 2 2 2 0 Streptococcal surface antigen repeat DUF1844 PF08899.11 ORF65505 - 0.068 13.5 0.5 0.12 12.7 0.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF1844) AJAP1_PANP_C PF15298.6 ORF65505 - 0.074 13.3 0.0 0.093 12.9 0.0 1.3 1 1 0 1 1 1 0 AJAP1/PANP C-terminus Tropomyosin_1 PF12718.7 ORF65505 - 0.08 13.1 3.9 0.092 12.9 3.9 1.1 1 0 0 1 1 1 0 Tropomyosin like GIT_CC PF16559.5 ORF65505 - 0.12 12.2 2.5 0.33 10.9 0.6 2.0 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor bZIP_1 PF00170.21 ORF65505 - 0.22 11.7 4.7 0.94 9.6 0.3 2.2 2 0 0 2 2 2 0 bZIP transcription factor Mto2_bdg PF12808.7 ORF65505 - 0.25 11.7 2.6 1.4 9.3 0.3 2.2 2 0 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region RepA_C PF04796.12 ORF65419 - 0.054 13.5 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Plasmid encoded RepA protein RRM_DME PF15628.6 ORF65419 - 0.092 12.9 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 RRM in Demeter DUF3164 PF11363.8 ORF65353 - 0.039 13.6 0.1 0.042 13.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3164) Rdx PF10262.9 ORF65118 - 4.8e-10 39.5 0.0 5.3e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Rdx family Exonuc_VIII PF06630.11 ORF6507 - 4.8e-58 196.2 0.5 5.3e-58 196.1 0.5 1.0 1 0 0 1 1 1 1 Enterobacterial exodeoxyribonuclease VIII RELT PF12606.8 ORF64517 - 0.025 13.6 0.1 0.043 12.8 0.1 1.3 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 CENP-O PF09496.10 ORF63904 - 0.029 14.3 2.0 0.029 14.3 2.0 1.0 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component YqzE PF14038.6 ORF63904 - 0.15 12.1 0.2 0.27 11.3 0.2 1.4 1 0 0 1 1 1 0 YqzE-like protein DUF779 PF05610.11 ORF63837 - 0.016 15.5 1.0 2.2 8.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF779) RepA_C PF04796.12 ORF63328 - 0.054 13.5 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Plasmid encoded RepA protein RRM_DME PF15628.6 ORF63328 - 0.092 12.9 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 RRM in Demeter MMS22L_N PF14910.6 ORF62708 - 0.46 8.9 4.6 0.42 9.0 4.6 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal MMS22L_N PF14910.6 ORF62020 - 0.46 8.9 4.6 0.42 9.0 4.6 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal ETRAMP PF09716.10 ORF61984 - 0.036 14.1 7.8 0.045 13.8 7.8 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF5532 PF17673.1 ORF61984 - 0.074 13.1 4.2 0.13 12.4 4.2 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5532) TMF_TATA_bd PF12325.8 ORF61664 - 0.00029 21.0 1.7 0.00029 21.0 1.7 2.1 2 1 0 2 2 2 1 TATA element modulatory factor 1 TATA binding TPR_MLP1_2 PF07926.12 ORF61664 - 0.0042 17.1 7.9 0.0054 16.8 7.9 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein Asp_Arg_Hydrox PF05118.15 ORF61664 - 0.044 13.6 1.5 0.051 13.4 1.5 1.1 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase TylF PF05711.11 ORF61664 - 0.045 13.0 1.0 0.049 12.9 1.0 1.0 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) RST PF12174.8 ORF61664 - 0.053 13.5 1.3 0.053 13.5 1.3 2.3 2 1 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain SIL1 PF16782.5 ORF61664 - 0.057 12.6 7.5 0.062 12.5 7.5 1.1 1 0 0 1 1 1 0 Nucleotide exchange factor SIL1 HMMR_C PF15908.5 ORF61664 - 0.062 13.6 10.8 0.34 11.2 2.2 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal DivIC PF04977.15 ORF61664 - 0.089 12.6 12.7 0.21 11.4 3.4 2.2 1 1 1 2 2 2 0 Septum formation initiator DUF148 PF02520.17 ORF61664 - 0.1 12.7 8.6 0.51 10.5 3.7 2.1 1 1 1 2 2 2 0 Domain of unknown function DUF148 BRE1 PF08647.11 ORF61664 - 0.19 11.8 11.4 0.086 12.9 8.3 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase TSC22 PF01166.18 ORF61664 - 0.45 10.9 4.0 0.76 10.1 0.2 2.7 2 1 1 3 3 3 0 TSC-22/dip/bun family FapA PF03961.13 ORF61664 - 0.65 8.5 9.7 0.69 8.4 9.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A TMF_DNA_bd PF12329.8 ORF61664 - 1.3 9.0 12.2 3.6 7.6 12.2 1.8 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding TMPIT PF07851.13 ORF61664 - 3.5 6.8 9.2 0.56 9.4 3.9 1.7 1 1 1 2 2 2 0 TMPIT-like protein Crystall_3 PF08964.10 ORF61260 - 0.24 11.6 0.1 0.33 11.2 0.1 1.1 1 0 0 1 1 1 0 Beta/Gamma crystallin NADH-G_4Fe-4S_3 PF10588.9 ORF60854 - 2.2 7.9 6.4 14 5.3 0.0 3.2 2 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Pkinase PF00069.25 ORF60182 - 8.1e-16 58.2 0.0 9.1e-16 58.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60182 - 0.00098 18.5 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF60182 - 0.044 13.1 0.0 0.049 12.9 0.0 1.1 1 0 0 1 1 1 0 Kinase-like IL3 PF02059.15 ORF60037 - 0.034 14.2 0.4 0.13 12.3 0.4 1.8 1 1 0 1 1 1 0 Interleukin-3 RMI1_C PF16099.5 ORF60037 - 0.039 13.8 0.0 0.043 13.6 0.0 1.2 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold PPDK_N PF01326.19 ORF59305 - 0.084 12.1 2.7 0.082 12.2 2.7 1.1 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Neuregulin PF02158.15 ORF59305 - 0.92 8.8 4.2 0.95 8.7 4.2 1.0 1 0 0 1 1 1 0 Neuregulin intracellular region MADF_DNA_bdg PF10545.9 ORF59305 - 0.93 9.9 6.1 0.23 11.8 1.1 2.0 2 0 0 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like PhrC_PhrF PF11131.8 ORF59113 - 1.3 8.7 5.7 2.7 7.6 0.9 2.6 2 1 0 2 2 2 0 Rap-phr extracellular signalling TPR_MLP1_2 PF07926.12 ORF59005 - 0.0092 16.0 1.1 0.0092 16.0 1.1 1.4 2 0 0 2 2 2 1 TPR/MLP1/MLP2-like protein Plug_translocon PF10559.9 ORF58838 - 0.045 13.6 1.4 0.099 12.5 1.4 1.6 1 0 0 1 1 1 0 Plug domain of Sec61p AA_kinase PF00696.28 ORF58541 - 7.6e-10 38.8 0.0 9.1e-10 38.5 0.0 1.0 1 0 0 1 1 1 1 Amino acid kinase family Rdx PF10262.9 ORF58512 - 4.8e-10 39.5 0.0 5.3e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Rdx family SeqA PF03925.13 ORF58429 - 0.11 12.4 0.1 12 5.9 0.0 2.0 1 1 1 2 2 2 0 SeqA protein C-terminal domain CECR6_TMEM121 PF14997.6 ORF58271 - 0.017 15.0 2.7 0.018 14.8 2.7 1.1 1 0 0 1 1 1 0 CECR6/TMEM121 family DUF997 PF06196.12 ORF57877 - 0.11 12.5 0.2 0.14 12.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF997) RgpF PF05045.12 ORF57589 - 0.013 14.3 0.1 0.015 14.1 0.1 1.0 1 0 0 1 1 1 0 Rhamnan synthesis protein F Crystall_3 PF08964.10 ORF57537 - 0.24 11.6 0.1 0.33 11.2 0.1 1.1 1 0 0 1 1 1 0 Beta/Gamma crystallin DUF5340 PF17275.2 ORF56884 - 0.0017 18.5 0.6 0.0024 18.0 0.6 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5340) BofC_C PF08955.10 ORF56884 - 0.046 13.8 0.3 0.12 12.5 0.3 1.8 1 1 0 1 1 1 0 BofC C-terminal domain PPDK_N PF01326.19 ORF56884 - 0.072 12.3 0.2 0.077 12.3 0.2 1.0 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Marek_A PF02124.15 ORF55822 - 0.096 12.5 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Marek's disease glycoprotein A MORN PF02493.20 ORF55738 - 3.5e-08 32.9 0.3 3.5e-08 32.9 0.3 2.7 3 0 0 3 3 3 1 MORN repeat DUF4211 PF13926.6 ORF54925 - 4.9 7.2 5.0 5.9 6.9 5.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4211) MTHFR_C PF12225.8 ORF54894 - 0.0032 17.1 1.4 0.0053 16.4 0.2 1.7 2 0 0 2 2 2 1 Methylene-tetrahydrofolate reductase C terminal DUF3858 PF12970.7 ORF54682 - 0.026 14.6 1.0 0.035 14.1 0.7 1.4 1 1 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3858) Ribosomal_S8e PF01201.22 ORF54682 - 0.12 12.6 2.8 0.14 12.3 2.8 1.1 1 0 0 1 1 1 0 Ribosomal protein S8e TMEM40 PF15817.5 ORF53619 - 0.055 13.2 6.7 0.064 13.0 6.7 1.2 1 0 0 1 1 1 0 Transmembrane protein 40 family DUF728 PF05304.12 ORF53525 - 0.028 14.3 1.4 0.029 14.2 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) LOH1CR12 PF10158.9 ORF53525 - 0.051 13.6 6.3 0.095 12.7 6.2 1.6 1 1 0 1 1 1 0 Tumour suppressor protein Alpha_kinase PF02816.18 ORF53525 - 0.3 11.2 3.1 0.34 11.0 3.1 1.1 1 0 0 1 1 1 0 Alpha-kinase family FAD_binding_8 PF08022.12 ORF53317 - 0.3 11.2 5.1 0.081 13.0 1.2 1.8 1 1 1 2 2 2 0 FAD-binding domain DUF4440 PF14534.6 ORF52809 - 0.00025 21.4 0.0 0.00026 21.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF52809 - 0.0045 17.6 0.0 0.0053 17.4 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 ORF52809 - 0.13 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like domain RebB PF11747.8 ORF51252 - 0.14 12.3 1.9 0.17 12.0 1.9 1.2 1 0 0 1 1 1 0 Killing trait Toxin_TOLIP PF00087.21 ORF49643 - 0.25 11.6 4.6 3.5 8.0 3.9 2.1 1 1 1 2 2 2 0 Snake toxin and toxin-like protein DUF4728 PF15860.5 ORF49251 - 0.034 14.8 6.6 0.042 14.5 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4728) SID-1_RNA_chan PF13965.6 ORF49251 - 0.19 10.1 5.0 0.22 9.9 5.0 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 SieB PF14163.6 ORF49251 - 4 6.9 8.1 4.7 6.7 8.1 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B zf-CCCH PF00642.24 ORF48425 - 1.6e-07 31.1 1.6 2.2e-07 30.6 1.6 1.2 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF48425 - 0.0015 18.5 1.8 0.0026 17.8 1.8 1.4 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 ORF48425 - 0.013 16.2 0.2 0.018 15.7 0.2 1.3 1 0 0 1 1 1 0 Torus domain zf-CCCH_4 PF18044.1 ORF48425 - 0.27 11.1 3.0 0.4 10.5 3.0 1.3 1 0 0 1 1 1 0 CCCH-type zinc finger YqjK PF13997.6 ORF48030 - 0.035 14.3 0.4 0.55 10.5 0.0 2.2 2 0 0 2 2 2 0 YqjK-like protein GCD14_N PF14801.6 ORF46925 - 0.07 13.0 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit N-term Ras PF00071.22 ORF46862 - 2.4e-24 85.8 0.1 2.6e-24 85.7 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF46862 - 2.2e-18 66.6 0.1 2.4e-18 66.5 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF46862 - 4.1e-06 26.3 0.0 4.2e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF46862 - 0.029 13.9 0.0 0.029 13.9 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF46862 - 0.041 13.2 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Ras PF00071.22 ORF46861 - 2.2e-07 30.6 0.1 3.2e-07 30.1 0.1 1.2 1 0 0 1 1 1 1 Ras family Importin_rep_6 PF18829.1 ORF46861 - 0.078 13.1 0.7 0.13 12.5 0.5 1.4 1 1 0 1 1 1 0 Importin repeat 6 NUDIX PF00293.28 ORF46596 - 0.00039 20.5 0.0 0.00046 20.2 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain DUF4599 PF15371.6 ORF46531 - 0.1 13.2 0.6 0.15 12.6 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4599) ADK_lid PF05191.14 ORF46319 - 0.14 12.1 0.2 0.14 12.1 0.2 2.3 2 0 0 2 2 2 0 Adenylate kinase, active site lid Herpes_UL32 PF06070.11 ORF46318 - 0.39 8.4 1.4 0.4 8.4 1.4 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 HATPase_c PF02518.26 ORF45529 - 2.8e-15 56.8 0.4 3.1e-15 56.6 0.4 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF45529 - 0.0021 17.9 0.1 0.0023 17.8 0.1 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Sec61_beta PF03911.16 ORF45472 - 1.9e-16 59.8 0.2 2.4e-16 59.4 0.2 1.2 1 0 0 1 1 1 1 Sec61beta family FliD_C PF07195.12 ORF45449 - 0.14 11.6 0.1 0.16 11.3 0.1 1.0 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus RepA_C PF04796.12 ORF45258 - 0.054 13.5 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Plasmid encoded RepA protein RRM_DME PF15628.6 ORF45258 - 0.092 12.9 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 RRM in Demeter MORN PF02493.20 ORF45087 - 3.1e-12 45.6 30.2 3.2e-05 23.6 2.8 4.1 4 0 0 4 4 4 3 MORN repeat DUF4931 PF16285.5 ORF44973 - 0.13 11.6 0.3 0.18 11.1 0.3 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4931) COMM_domain PF07258.14 ORF44832 - 0.014 15.5 1.8 0.028 14.5 1.1 1.8 1 1 1 2 2 2 0 COMM domain Consortin_C PF15281.6 ORF44242 - 0.012 15.6 1.0 0.017 15.1 1.0 1.3 1 0 0 1 1 1 0 Consortin C-terminus Rdx PF10262.9 ORF43850 - 4.8e-10 39.5 0.0 5.3e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Rdx family Rit1_C PF17184.4 ORF43028 - 0.084 12.3 0.1 0.12 11.8 0.1 1.2 1 0 0 1 1 1 0 Rit1 N-terminal domain E3_UFM1_ligase PF09743.9 ORF42929 - 0.012 15.3 0.2 0.012 15.3 0.2 1.1 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 DUF4071 PF13281.6 ORF42754 - 0.011 14.8 0.1 0.012 14.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4071) Glyphos_transf PF04464.14 ORF42754 - 0.079 11.9 0.1 0.082 11.9 0.1 1.1 1 0 0 1 1 1 0 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TRAPP PF04051.16 ORF42664 - 0.072 12.8 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Transport protein particle (TRAPP) component CaATP_NAI PF12515.8 ORF42587 - 0.17 11.5 0.2 0.17 11.5 0.2 1.8 2 0 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain EMC3_TMCO1 PF01956.16 ORF42371 - 0.72 9.6 8.3 3.3 7.4 0.8 2.1 1 1 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like VRP3 PF03536.15 ORF42341 - 0.15 11.6 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Salmonella virulence-associated 28kDa protein RBM39linker PF15519.6 ORF42338 - 0.084 14.0 1.2 0.16 13.1 1.2 1.4 1 1 0 1 1 1 0 linker between RRM2 and RRM3 domains in RBM39 protein Herpes_DNAp_acc PF04929.12 ORF41758 - 0.77 8.7 8.0 0.92 8.4 8.0 1.0 1 0 0 1 1 1 0 Herpes DNA replication accessory factor DUF4769 PF15992.5 ORF40960 - 0.01 15.7 2.0 0.01 15.7 2.0 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4769) CxC6 PF18721.1 ORF40412 - 5.4 7.4 8.0 2.5 8.5 2.5 2.3 2 0 0 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases DUF779 PF05610.11 ORF39568 - 0.016 15.5 1.0 2.2 8.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF779) RSRP PF17069.5 ORF39235 - 0.11 12.0 20.8 0.11 12.0 20.8 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 DUF641 PF04859.12 ORF39104 - 0.0017 18.7 1.7 0.0024 18.2 1.7 1.3 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) Csm1_N PF18504.1 ORF39104 - 0.043 14.1 3.4 0.061 13.7 3.0 1.5 1 1 0 1 1 1 0 Csm1 N-terminal domain DivIC PF04977.15 ORF39104 - 0.051 13.3 2.7 0.075 12.8 2.6 1.5 1 1 0 1 1 1 0 Septum formation initiator DUF4709 PF15821.5 ORF39104 - 0.078 13.3 5.5 0.096 13.0 5.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4709) Fzo_mitofusin PF04799.13 ORF39104 - 0.083 12.4 2.1 0.099 12.2 2.1 1.1 1 0 0 1 1 1 0 fzo-like conserved region DUF3987 PF13148.6 ORF39104 - 0.46 9.5 3.2 0.5 9.3 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Cellulose_synt PF03552.14 ORF39104 - 0.46 8.9 2.8 0.44 9.0 2.8 1.0 1 0 0 1 1 1 0 Cellulose synthase Pox_A_type_inc PF04508.12 ORF39104 - 1.5 8.8 5.1 1.7 8.6 0.5 2.9 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat Nodulin_late PF07127.11 ORF38864 - 1.8 8.9 7.8 11 6.5 2.7 2.3 1 1 1 2 2 2 0 Late nodulin protein Fusion_F0 PF13044.6 ORF38792 - 0.017 13.8 0.0 0.019 13.7 0.0 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0, Isavirus UT PF03253.14 ORF38507 - 0.039 13.1 1.0 0.047 12.8 1.0 1.1 1 0 0 1 1 1 0 Urea transporter YfhO PF09586.10 ORF38356 - 6 5.0 10.8 6.5 4.9 10.8 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO HlyIII PF03006.20 ORF38291 - 0.015 15.0 0.3 0.016 14.9 0.3 1.1 1 0 0 1 1 1 0 Haemolysin-III related IL15 PF02372.15 ORF35705 - 0.034 14.1 0.0 0.038 14.0 0.0 1.1 1 0 0 1 1 1 0 Interleukin 15 ACBP PF00887.19 ORF35413 - 4.7e-05 23.5 0.1 7.2e-05 22.9 0.1 1.5 1 0 0 1 1 1 1 Acyl CoA binding protein 7TM_GPCR_Srw PF10324.9 ORF35413 - 0.092 12.0 0.2 0.092 12.0 0.2 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srw ALO PF04030.14 ORF35339 - 7.5e-08 32.5 0.3 8.2e-08 32.4 0.3 1.0 1 0 0 1 1 1 1 D-arabinono-1,4-lactone oxidase MMS22L_N PF14910.6 ORF35313 - 0.46 8.9 4.6 0.42 9.0 4.6 1.0 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal Laminin_N PF00055.17 ORF35130 - 0.21 11.1 0.1 0.31 10.6 0.0 1.3 2 0 0 2 2 2 0 Laminin N-terminal (Domain VI) Vta1 PF04652.16 ORF34461 - 0.00013 21.9 0.2 0.00019 21.4 0.2 1.2 1 0 0 1 1 1 1 Vta1 like UDP-g_GGTase PF06427.11 ORF33521 - 0.13 12.4 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 UDP-glucose:Glycoprotein Glucosyltransferase PGPGW PF09656.10 ORF33227 - 3.9 7.0 6.6 0.29 10.7 1.2 1.8 2 1 0 2 2 2 0 Putative transmembrane protein (PGPGW) RNR_N PF08343.10 ORF33042 - 0.0098 15.9 0.5 0.015 15.3 0.5 1.3 1 0 0 1 1 1 1 Ribonucleotide reductase N-terminal SAS4 PF15460.6 ORF33042 - 0.11 12.6 2.4 0.56 10.3 0.8 2.0 1 1 1 2 2 2 0 Something about silencing, SAS, complex subunit 4 PRC PF05239.16 ORF33019 - 0.052 13.6 0.0 0.078 13.1 0.0 1.3 1 0 0 1 1 1 0 PRC-barrel domain Phytochelatin_C PF09328.10 ORF32719 - 0.0095 15.3 0.1 0.01 15.2 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1984) DUF5447 PF17525.2 ORF32719 - 0.47 10.9 4.5 0.72 10.4 4.4 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5447) Spc7 PF08317.11 ORF32335 - 0.034 13.0 10.5 0.036 12.9 10.5 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Glutaredoxin2_C PF04399.13 ORF32335 - 0.057 13.3 1.0 0.075 12.9 0.8 1.3 1 1 0 1 1 1 0 Glutaredoxin 2, C terminal domain SlyX PF04102.12 ORF32335 - 0.098 13.3 5.6 1.1 9.9 1.9 2.5 1 1 2 3 3 3 0 SlyX BLOC1_2 PF10046.9 ORF32335 - 0.16 12.2 6.6 0.21 11.9 1.9 2.1 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4200 PF13863.6 ORF32335 - 0.38 11.1 13.8 0.51 10.7 13.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) DUF5320 PF17253.2 ORF32335 - 1.2 10.2 6.0 11 7.1 2.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5320) MNSV_P7B PF06692.11 ORF31994 - 5.7 7.0 8.0 2.6 8.1 3.7 2.2 2 2 0 2 2 2 0 Melon necrotic spot virus P7B protein Resistin PF06954.11 ORF31785 - 8.2 7.0 15.7 0.68 10.5 10.2 1.8 1 1 1 2 2 2 0 Resistin Metallophos_C PF14008.6 ORF31624 - 0.002 18.9 0.0 0.0028 18.5 0.0 1.2 1 0 0 1 1 1 1 Iron/zinc purple acid phosphatase-like protein C Ribosomal_S6e PF01092.19 ORF31449 - 0.063 13.3 0.0 0.075 13.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S6e NTR PF01759.21 ORF30166 - 0.13 12.1 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 UNC-6/NTR/C345C module GH-E PF14410.6 ORF30166 - 0.17 12.3 1.4 0.53 10.7 0.1 2.1 2 1 0 2 2 2 0 HNH/ENDO VII superfamily nuclease with conserved GHE residues PBP1_TM PF14812.6 ORF30013 - 0.0018 18.6 0.3 0.0024 18.2 0.3 1.1 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Bac_DnaA_C PF08299.11 ORF30013 - 0.077 13.0 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix Nop10p PF04135.12 ORF29158 - 0.47 10.5 6.5 3.1 7.9 1.0 2.5 1 1 1 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family Corona_3 PF04694.12 ORF28742 - 0.21 12.0 0.0 0.4 11.1 0.0 1.4 1 0 0 1 1 1 0 Coronavirus ORF3 protein Rdx PF10262.9 ORF27694 - 4.8e-10 39.5 0.0 5.3e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Rdx family Barwin PF00967.17 ORF27479 - 0.079 12.8 0.8 0.1 12.4 0.6 1.4 1 1 0 1 1 1 0 Barwin family Tn916-Xis PF09035.10 ORF27479 - 0.17 12.1 0.0 0.22 11.8 0.0 1.2 1 0 0 1 1 1 0 Excisionase from transposon Tn916 Sprouty PF05210.13 ORF26762 - 0.088 13.2 0.1 0.11 12.9 0.1 1.2 1 1 0 1 1 1 0 Sprouty protein (Spry) Phi-29_GP16_7 PF06720.11 ORF24766 - 0.032 14.1 0.3 0.035 14.0 0.3 1.2 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 SesA PF17107.5 ORF24766 - 0.042 14.1 0.1 0.052 13.7 0.1 1.3 1 1 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases zf-Tim10_DDP PF02953.15 ORF24766 - 0.11 12.2 0.6 0.23 11.1 0.2 1.8 2 0 0 2 2 2 0 Tim10/DDP family zinc finger FYVE PF01363.21 ORF24044 - 0.00014 21.9 2.2 0.00018 21.6 2.2 1.2 1 1 0 1 1 1 1 FYVE zinc finger ZZ PF00569.17 ORF24044 - 0.018 14.9 5.6 0.063 13.1 6.0 1.7 2 0 0 2 2 2 0 Zinc finger, ZZ type Tnp_zf-ribbon_2 PF13842.6 ORF24044 - 4.7 8.1 12.9 0.32 11.8 8.1 1.6 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon PhrC_PhrF PF11131.8 ORF22980 - 1.3 8.7 5.7 2.7 7.6 0.9 2.6 2 1 0 2 2 2 0 Rap-phr extracellular signalling C1_2 PF03107.16 ORF21174 - 0.022 15.1 2.2 0.054 13.8 2.2 1.7 1 0 0 1 1 1 0 C1 domain DUF3910 PF13049.6 ORF20323 - 0.2 12.0 0.0 0.25 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3910) ADPRTs_Tse2 PF18648.1 ORF18803 - 0.085 12.9 0.0 0.094 12.8 0.0 1.1 1 0 0 1 1 1 0 Tse2 ADP-ribosyltransferase toxins PBP1_TM PF14812.6 ORF18756 - 0.0018 18.6 0.3 0.0024 18.2 0.3 1.1 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Bac_DnaA_C PF08299.11 ORF18756 - 0.077 13.0 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix Response_reg PF00072.24 ORF18674 - 1.1e-15 57.7 0.2 1.3e-15 57.6 0.2 1.0 1 0 0 1 1 1 1 Response regulator receiver domain NBD94 PF16830.5 ORF18674 - 0.13 12.6 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Nucleotide-Binding Domain 94 of RH FtsJ PF01728.19 ORF18674 - 0.15 12.2 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 FtsJ-like methyltransferase DNA_RNApol_7kD PF03604.13 ORF1747 - 0.00099 18.7 0.8 0.0034 17.0 0.8 2.0 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit Pkinase_fungal PF17667.1 ORF1747 - 0.059 12.1 0.6 0.07 11.9 0.6 1.1 1 0 0 1 1 1 0 Fungal protein kinase Rdx PF10262.9 ORF17306 - 4.8e-10 39.5 0.0 5.3e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Rdx family DUF4367 PF14285.6 ORF1694 - 0.055 13.9 2.6 0.059 13.8 2.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4367) DUF4035 PF13227.6 ORF16477 - 0.015 15.0 0.5 3.4 7.4 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4035) Rdx PF10262.9 ORF15864 - 4.7e-10 39.5 0.0 5.3e-10 39.4 0.0 1.1 1 0 0 1 1 1 1 Rdx family DUF1471 PF07338.13 ORF15628 - 2.4e-13 49.8 0.3 3.3e-13 49.4 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF4156 PF13698.6 ORF15628 - 0.0059 16.9 0.2 0.0077 16.5 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4156) PGM_PMM_II PF02879.16 ORF15628 - 0.012 16.2 0.0 0.014 16.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ferrochelatase PF00762.19 ORF15628 - 0.013 14.6 0.0 0.015 14.4 0.0 1.0 1 0 0 1 1 1 0 Ferrochelatase Acetyltransf_1 PF00583.25 ORF151826 - 1.2e-11 44.8 0.1 1.6e-11 44.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF151826 - 6.4e-08 32.9 0.0 8.1e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF151826 - 1.6e-07 31.3 0.0 1.9e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF151826 - 4.8e-07 29.6 0.1 5.7e-07 29.4 0.1 1.1 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF151826 - 0.00042 20.4 0.0 0.00057 20.0 0.0 1.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 ORF151826 - 0.00056 19.6 0.0 0.00066 19.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF151826 - 0.016 15.4 0.0 0.022 14.9 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 ORF151826 - 0.019 15.6 0.0 0.023 15.4 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Gly_acyl_tr_C PF08444.10 ORF151826 - 0.13 12.5 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region Annexin_like PF18411.1 ORF151469 - 0.033 14.4 0.1 0.036 14.3 0.1 1.2 1 0 0 1 1 1 0 Annexin-like domain DUF2443 PF10398.9 ORF150387 - 0.2 11.7 0.0 0.24 11.5 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2443) TMF_TATA_bd PF12325.8 ORF150130 - 0.00029 21.0 1.7 0.00029 21.0 1.7 2.1 2 1 0 2 2 2 1 TATA element modulatory factor 1 TATA binding TPR_MLP1_2 PF07926.12 ORF150130 - 0.0042 17.1 7.9 0.0054 16.8 7.9 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein Asp_Arg_Hydrox PF05118.15 ORF150130 - 0.044 13.6 1.5 0.051 13.4 1.5 1.1 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase TylF PF05711.11 ORF150130 - 0.045 13.0 1.0 0.049 12.9 1.0 1.0 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) RST PF12174.8 ORF150130 - 0.053 13.5 1.3 0.053 13.5 1.3 2.3 2 1 0 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain SIL1 PF16782.5 ORF150130 - 0.057 12.6 7.5 0.062 12.5 7.5 1.1 1 0 0 1 1 1 0 Nucleotide exchange factor SIL1 HMMR_C PF15908.5 ORF150130 - 0.062 13.6 10.8 0.34 11.2 2.2 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal DivIC PF04977.15 ORF150130 - 0.089 12.6 12.7 0.21 11.4 3.4 2.2 1 1 1 2 2 2 0 Septum formation initiator DUF148 PF02520.17 ORF150130 - 0.1 12.7 8.6 0.51 10.5 3.7 2.1 1 1 1 2 2 2 0 Domain of unknown function DUF148 BRE1 PF08647.11 ORF150130 - 0.19 11.8 11.4 0.086 12.9 8.3 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase TSC22 PF01166.18 ORF150130 - 0.45 10.9 4.0 0.76 10.1 0.2 2.7 2 1 1 3 3 3 0 TSC-22/dip/bun family FapA PF03961.13 ORF150130 - 0.65 8.5 9.7 0.69 8.4 9.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A TMF_DNA_bd PF12329.8 ORF150130 - 1.3 9.0 12.2 3.6 7.6 12.2 1.8 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding TMPIT PF07851.13 ORF150130 - 3.5 6.8 9.2 0.56 9.4 3.9 1.7 1 1 1 2 2 2 0 TMPIT-like protein 4HBT_3 PF13622.6 ORF149230 - 0.016 15.5 0.0 0.018 15.3 0.0 1.0 1 0 0 1 1 1 0 Thioesterase-like superfamily PH_18 PF18469.1 ORF14857 - 0.043 13.8 0.1 0.058 13.4 0.1 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain ATP-synt_I PF03899.15 ORF146466 - 0.083 13.3 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 ATP synthase I chain Ribosomal_TL5_C PF14693.6 ORF146377 - 0.064 13.6 0.0 0.096 13.1 0.0 1.3 1 1 0 1 1 1 0 Ribosomal protein TL5, C-terminal domain MBDa PF16564.5 ORF146377 - 0.37 11.0 2.2 0.39 10.9 0.1 2.0 2 0 0 2 2 2 0 p55-binding region of Methyl-CpG-binding domain proteins MBD Crystall_3 PF08964.10 ORF146161 - 0.24 11.6 0.1 0.33 11.2 0.1 1.1 1 0 0 1 1 1 0 Beta/Gamma crystallin NAGLU_C PF12972.7 ORF145675 - 0.097 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain EF-hand_1 PF00036.32 ORF145563 - 3e-15 54.5 4.0 3.6e-08 32.4 0.3 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF145563 - 5e-12 46.1 3.2 1.7e-06 28.3 0.1 2.0 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF145563 - 2.8e-11 43.1 3.9 7.5e-08 32.1 0.1 2.6 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF145563 - 1.6e-10 40.0 2.9 7.7e-05 22.3 0.3 2.6 2 1 0 2 2 2 2 EF-hand domain EF-hand_9 PF14658.6 ORF145563 - 4.2e-06 27.0 0.0 0.009 16.3 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF145563 - 7.5e-06 25.2 3.0 0.0078 15.7 0.2 2.4 2 0 0 2 2 2 2 EF hand PMBR PF09373.10 ORF145563 - 0.0041 17.2 0.2 1 9.6 0.0 3.1 4 0 0 4 4 4 1 Pseudomurein-binding repeat Staphylokinase PF02821.16 ORF145563 - 0.0071 16.8 0.1 0.0083 16.6 0.1 1.1 1 0 0 1 1 1 1 Staphylokinase/Streptokinase family FlgD PF03963.14 ORF145563 - 0.032 14.5 0.0 0.045 14.1 0.0 1.2 1 0 0 1 1 1 0 Flagellar hook capping protein - N-terminal region SUB1_ProdP9 PF18213.1 ORF145563 - 0.084 12.7 0.5 0.46 10.4 0.0 2.0 1 1 0 2 2 2 0 SUB1 protease Prodomain ProdP9 DUF4441 PF14536.6 ORF144494 - 0.0047 17.1 0.3 0.0078 16.4 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4441) HlyIII PF03006.20 ORF142055 - 0.015 15.0 0.3 0.016 14.9 0.3 1.1 1 0 0 1 1 1 0 Haemolysin-III related DUF4734 PF15881.5 ORF140585 - 0.037 14.2 0.2 0.061 13.5 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4734) Metallophos_2 PF12850.7 ORF140509 - 1.2e-07 32.1 0.0 1.5e-07 31.8 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain TrkA_N PF02254.18 ORF140085 - 0.076 13.3 0.0 0.087 13.1 0.0 1.1 1 0 0 1 1 1 0 TrkA-N domain Glu_synthase PF01645.17 ORF140002 - 0.04 13.0 0.1 0.046 12.9 0.1 1.1 1 0 0 1 1 1 0 Conserved region in glutamate synthase DUF1199 PF06712.11 ORF139602 - 0.058 13.4 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1199) bZIP_1 PF00170.21 ORF139503 - 2.4e-09 37.2 10.5 2.4e-09 37.2 10.5 1.9 1 1 0 2 2 2 1 bZIP transcription factor bZIP_2 PF07716.15 ORF139503 - 7.7e-07 29.1 6.9 1.4e-06 28.3 6.9 1.5 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_Maf PF03131.17 ORF139503 - 0.0011 19.4 5.8 0.0011 19.4 5.8 2.0 1 1 1 2 2 2 1 bZIP Maf transcription factor DUF4748 PF15932.5 ORF139503 - 7.9 6.3 7.9 7.5 6.4 1.5 2.5 1 1 0 2 2 2 0 Domain of unknown function (DUF4748) Chromo PF00385.24 ORF139067 - 1.6e-14 53.5 1.4 2.3e-14 53.0 1.4 1.3 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain MTCP1 PF08991.10 ORF138466 - 0.11 12.8 0.8 0.11 12.8 0.8 2.7 1 1 1 2 2 2 0 Mature-T-Cell Proliferation I type Rdx PF10262.9 ORF138404 - 4.8e-10 39.5 0.0 5.3e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Rdx family BRE1 PF08647.11 ORF137618 - 0.0084 16.2 1.8 0.0092 16.0 1.8 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Plant_NMP1 PF06694.11 ORF137618 - 0.066 12.3 0.1 0.075 12.1 0.1 1.1 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) Acp26Ab PF05777.12 ORF137019 - 1.4 9.6 5.1 2 9.1 5.1 1.2 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) DUF5438 PF17506.2 ORF135310 - 0.28 11.5 3.7 0.33 11.3 3.0 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5438) Ntox8 PF15545.6 ORF134858 - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 8 Phage_Coat_B PF05356.11 ORF134766 - 0.099 12.6 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Phage Coat protein B Auxin_repressed PF05564.12 ORF132980 - 0.052 14.2 0.8 0.059 14.1 0.8 1.1 1 0 0 1 1 1 0 Dormancy/auxin associated protein DUF5592 PF17332.2 ORF132685 - 0.057 14.0 0.9 5.5 7.6 0.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5592) Neurochondrin PF05536.11 ORF132667 - 0.068 11.5 0.0 0.091 11.1 0.0 1.1 1 0 0 1 1 1 0 Neurochondrin DUF2315 PF10231.9 ORF131776 - 0.054 13.6 0.0 0.058 13.5 0.0 1.1 1 0 0 1 1 1 0 Apoptogenic protein 1 Vsr PF03852.15 ORF131417 - 0.12 12.2 1.2 0.18 11.7 1.2 1.4 1 1 0 1 1 1 0 DNA mismatch endonuclease Vsr Med5 PF08689.10 ORF131395 - 0.15 9.9 0.5 0.18 9.6 0.5 1.1 1 0 0 1 1 1 0 Mediator complex subunit Med5 PH_18 PF18469.1 ORF130524 - 0.043 13.8 0.1 0.058 13.4 0.1 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain GPR_Gpa2_C PF11970.8 ORF128004 - 0.15 12.1 1.0 0.47 10.6 0.2 2.0 1 1 1 2 2 2 0 G protein-coupled glucose receptor regulating Gpa2 C-term DUF3781 PF12636.7 ORF127830 - 0.017 15.0 1.1 0.028 14.3 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) DUF503 PF04456.12 ORF127443 - 0.14 12.0 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF503) Mac PF12464.8 ORF127373 - 0.0093 16.2 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 1 Maltose acetyltransferase Armet PF10208.9 ORF127373 - 0.1 12.5 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding APOC4 PF15119.6 ORF127373 - 0.12 12.6 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Apolipoprotein C4 Nbl1_Borealin_N PF10444.9 ORF127158 - 0.06 13.0 0.0 0.098 12.3 0.0 1.3 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Colipase PF01114.18 ORF127013 - 0.01 15.5 0.6 0.025 14.2 0.6 1.7 1 0 0 1 1 1 0 Colipase, N-terminal domain MORN PF02493.20 ORF126878 - 1.6e-07 30.8 5.9 0.0001 21.9 0.2 3.1 3 0 0 3 3 3 2 MORN repeat Rubredoxin_C PF18267.1 ORF126878 - 0.11 12.4 0.2 0.23 11.4 0.1 1.6 1 1 1 2 2 2 0 Rubredoxin NAD+ reductase C-terminal domain SRP72 PF08492.12 ORF12518 - 1.4e-11 44.7 10.3 1.4e-11 44.7 10.3 1.9 2 1 1 3 3 3 1 SRP72 RNA-binding domain E1-E2_ATPase PF00122.20 ORF124633 - 0.52 9.8 3.0 0.65 9.5 3.0 1.1 1 0 0 1 1 1 0 E1-E2 ATPase MOSC PF03473.17 ORF122783 - 4.7e-09 36.4 0.0 5.4e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 MOSC domain CX9C PF16860.5 ORF12159 - 2.9e-07 30.4 0.4 4.2e-07 29.9 0.4 1.2 1 0 0 1 1 1 1 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, BolA PF01722.18 ORF121250 - 5.8e-13 48.9 0.0 7.3e-13 48.6 0.0 1.2 1 0 0 1 1 1 1 BolA-like protein CECR6_TMEM121 PF14997.6 ORF12086 - 0.017 15.0 2.7 0.018 14.8 2.7 1.1 1 0 0 1 1 1 0 CECR6/TMEM121 family CttA_N PF18244.1 ORF120571 - 0.23 11.9 0.0 0.26 11.7 0.0 1.2 1 0 0 1 1 1 0 Cellulose-binding protein CttA N-terminal domain Perilipin PF03036.16 ORF119765 - 0.11 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 Perilipin family SVIP PF15811.5 ORF118959 - 0.00011 22.6 6.4 0.00011 22.6 6.4 1.9 2 0 0 2 2 2 1 Small VCP/p97-interacting protein DUF4441 PF14536.6 ORF118912 - 0.016 15.4 0.6 0.024 14.8 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) Glyco_trans_4_4 PF13579.6 ORF118077 - 0.043 14.3 0.1 0.047 14.1 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain WRC PF08879.10 ORF118077 - 0.072 12.8 5.3 0.17 11.6 0.3 2.3 2 0 0 2 2 2 0 WRC Synapsin_C PF02750.14 ORF118077 - 0.18 11.3 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 Synapsin, ATP binding domain ABC_ATPase PF09818.9 ORF116741 - 0.0084 14.9 0.0 0.0084 14.9 0.0 1.1 1 0 0 1 1 1 1 Predicted ATPase of the ABC class AAA_21 PF13304.6 ORF116741 - 0.066 13.0 0.0 0.078 12.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system DUF4440 PF14534.6 ORF114643 - 0.00025 21.4 0.0 0.00026 21.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF114643 - 0.0045 17.6 0.0 0.0053 17.4 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain SnoaL_3 PF13474.6 ORF114643 - 0.13 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like domain Phospholamban PF04272.14 ORF114027 - 6.1 6.4 8.3 0.99 8.9 0.3 2.3 2 0 0 2 2 2 0 Phospholamban PanZ PF12568.8 ORF113571 - 0.0057 16.4 0.1 2.3 7.9 0.0 2.8 3 0 0 3 3 3 2 Acetyltransferase (GNAT) domain, PanZ Phe_hydrox_dim PF07976.12 ORF113571 - 0.17 11.9 0.5 21 5.1 0.0 2.8 1 1 2 3 3 3 0 Phenol hydroxylase, C-terminal dimerisation domain RL10P_insert PF17777.1 ORF113571 - 0.18 11.8 0.0 17 5.5 0.0 2.1 1 1 1 2 2 2 0 Insertion domain in 60S ribosomal protein L10P RbsD_FucU PF05025.13 ORF11320 - 2.2e-20 73.4 0.4 2.4e-20 73.3 0.4 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family NitrOD5 PF11537.8 ORF11320 - 0.0036 17.4 0.1 0.0047 17.0 0.1 1.1 1 0 0 1 1 1 1 Nitrosopumilus output domain 5 HydF_tetramer PF18133.1 ORF11320 - 0.024 14.4 0.2 0.029 14.1 0.2 1.2 1 0 0 1 1 1 0 Hydrogen maturase F tetramerization domain AlaDh_PNT_C PF01262.21 ORF11320 - 0.059 12.7 0.1 0.07 12.4 0.1 1.1 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Hormone_1 PF00103.20 ORF11320 - 0.098 12.4 0.2 0.16 11.7 0.2 1.3 2 0 0 2 2 2 0 Somatotropin hormone family NosL PF05573.12 ORF112994 - 0.028 14.8 0.1 0.038 14.3 0.1 1.3 1 1 0 1 1 1 0 NosL DUF2847 PF11009.8 ORF112180 - 0.012 15.5 0.8 0.015 15.2 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2847) Iron_traffic PF04362.14 ORF111912 - 2e-40 136.4 1.4 2.2e-40 136.2 1.4 1.0 1 0 0 1 1 1 1 Bacterial Fe(2+) trafficking DUF5412 PF17428.2 ORF111912 - 0.0084 16.0 0.2 0.012 15.5 0.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5412) LicD PF04991.13 ORF111342 - 0.025 14.7 0.1 0.026 14.7 0.1 1.1 1 0 0 1 1 1 0 LicD family KdpA PF03814.15 ORF111342 - 0.035 12.3 0.0 0.037 12.2 0.0 1.0 1 0 0 1 1 1 0 Potassium-transporting ATPase A subunit DUF5527 PF17665.1 ORF110803 - 0.26 10.8 2.0 0.3 10.6 2.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5527) Allexi_40kDa PF05549.11 ORF110635 - 0.049 13.1 0.1 0.053 13.0 0.1 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein DUF4110 PF13422.6 ORF110635 - 0.19 11.8 5.6 0.23 11.6 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4110) Chromo PF00385.24 ORF109795 - 1.4e-13 50.5 0.7 1.9e-13 50.1 0.7 1.2 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain Chromo_shadow PF01393.19 ORF109795 - 0.031 14.4 0.2 0.089 12.9 0.2 1.9 1 1 1 2 2 2 0 Chromo shadow domain Spore_YhaL PF14147.6 ORF109749 - 0.2 11.4 0.0 0.28 10.9 0.0 1.2 1 0 0 1 1 1 0 Sporulation protein YhaL MutS_V PF00488.21 ORF108987 - 5e-07 29.9 0.0 6.9e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 MutS domain V DUF768 PF05589.11 ORF108987 - 0.16 12.0 0.0 0.28 11.2 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF768) DUF4462 PF14692.6 ORF108453 - 0.011 15.2 0.3 0.022 14.2 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) PH_18 PF18469.1 ORF108338 - 0.043 13.8 0.1 0.058 13.4 0.1 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks295.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks295.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks295.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks295.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:15:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Synaptobrevin PF00957.21 ORF107643 - 0.18 11.6 6.0 0.11 12.3 1.2 2.0 2 0 0 2 2 2 0 Synaptobrevin Gemini_mov PF01708.16 ORF107643 - 1.4 8.8 3.9 18 5.2 0.3 2.1 2 0 0 2 2 2 0 Geminivirus putative movement protein DUF5438 PF17506.2 ORF107576 - 0.28 11.5 3.7 0.33 11.3 3.0 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5438) BLOC1_2 PF10046.9 ORF106236 - 0.008 16.5 2.0 0.013 15.8 1.0 1.7 1 1 1 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 FlaC_arch PF05377.11 ORF106236 - 0.032 14.6 3.9 2.1 8.8 0.1 2.2 1 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Desulfoferrod_N PF06397.12 ORF105821 - 0.034 13.8 0.2 0.052 13.2 0.2 1.3 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain Zn_ribbon_17 PF17120.5 ORF105821 - 0.038 13.6 0.3 0.051 13.2 0.3 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Sgf11_N PF18519.1 ORF105639 - 0.14 11.8 0.1 0.29 10.7 0.1 1.5 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain FtsK_4TM PF13491.6 ORF105375 - 0.0049 16.6 0.0 0.0055 16.4 0.0 1.1 1 0 0 1 1 1 1 4TM region of DNA translocase FtsK/SpoIIIE G3P_acyltransf PF02660.15 ORF104766 - 0.31 11.1 4.9 0.31 11.1 4.9 1.2 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase Aldo_ket_red PF00248.21 ORF104619 - 0.041 13.1 0.0 0.042 13.0 0.0 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family DUF2530 PF10745.9 ORF104567 - 0.07 13.4 1.9 0.57 10.4 1.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2530) RRM_2 PF04059.12 ORF104318 - 0.0011 19.1 0.0 0.0016 18.6 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif 2 zf_CCCH_5 PF18384.1 ORF103856 - 3.1 8.0 7.3 0.24 11.6 2.2 1.9 2 0 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) Glyco_hydro_49N PF17433.2 ORF100542 - 0.13 11.9 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 49 N-terminal Ig-like domain Rdx PF10262.9 ORF100434 - 4.8e-10 39.5 0.0 5.3e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Rdx family Cation_ATPase_C PF00689.21 NODE_61210_length_268_cov_1.141631_g53270_i0reverse_frame_1 - 0.014 15.1 0.9 0.017 14.9 0.9 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus rve PF00665.26 NODE_61206_length_268_cov_1.184549_g53266_i0forward_frame_1 - 3.6e-06 27.2 0.0 3.9e-06 27.1 0.0 1.0 1 0 0 1 1 1 1 Integrase core domain Cbl_N3 PF02762.14 NODE_61205_length_268_cov_1.197425_g53265_i0reverse_frame_1 - 0.11 12.4 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, SH2-like domain DUF1478 PF07349.11 NODE_61205_length_268_cov_1.197425_g53265_i0forward_frame_1 - 0.18 11.7 1.7 0.21 11.5 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1478) DUF2774 PF11242.8 NODE_61201_length_268_cov_1.253219_g53261_i0forward_frame_1 - 0.021 15.0 0.2 0.045 13.9 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2774) DUF1414 PF07208.11 NODE_61201_length_268_cov_1.253219_g53261_i0forward_frame_1 - 0.025 14.6 0.1 0.04 13.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1414) DUF3573 PF12097.8 NODE_61187_length_268_cov_1.527897_g53247_i0forward_frame_1 - 0.026 13.4 0.4 0.026 13.4 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) Peptidase_M60_C PF18630.1 NODE_61178_length_268_cov_1.673820_g53238_i0reverse_frame_1 - 0.098 12.8 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Peptidase M60 C-terminal domain QVR PF17064.5 NODE_61178_length_268_cov_1.673820_g53238_i0forward_frame_1 - 0.1 12.8 1.3 0.11 12.8 1.3 1.2 1 0 0 1 1 1 0 Sleepless protein ZYG-11_interact PF05884.12 NODE_61168_length_268_cov_1.914163_g53228_i0forward_frame_1 - 0.083 12.3 0.5 0.084 12.3 0.5 1.1 1 0 0 1 1 1 0 Interactor of ZYG-11 YbhQ PF11076.8 NODE_61166_length_268_cov_1.939914_g53226_i0reverse_frame_1 - 1.2e-16 60.9 5.2 1.7e-16 60.5 5.2 1.2 1 0 0 1 1 1 1 Putative inner membrane protein YbhQ Fusion_F0 PF13044.6 NODE_61166_length_268_cov_1.939914_g53226_i0reverse_frame_1 - 0.0072 15.0 0.0 0.0082 14.8 0.0 1.0 1 0 0 1 1 1 1 Fusion glycoprotein F0, Isavirus Helicase_C PF00271.31 NODE_61160_length_268_cov_2.047210_g53220_i0forward_frame_1 - 2.9e-28 98.4 0.2 3.3e-28 98.3 0.2 1.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 NODE_61160_length_268_cov_2.047210_g53220_i0forward_frame_1 - 0.043 13.0 0.0 0.044 13.0 0.0 1.1 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase DUF918 PF06033.11 NODE_61159_length_268_cov_2.047210_g53219_i0forward_frame_1 - 0.045 13.8 1.2 0.072 13.1 1.2 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF918) HTH_49 PF18010.1 NODE_61158_length_268_cov_2.064378_g53218_i0reverse_frame_1 - 0.2 11.6 0.0 0.28 11.1 0.0 1.2 1 0 0 1 1 1 0 Cry35Ab1 HTH C-terminal domain Kinesin PF00225.23 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_1 - 6.9e-35 120.6 0.3 7.4e-35 120.4 0.3 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_1 - 2.7e-21 76.0 0.1 2.9e-21 76.0 0.1 1.0 1 0 0 1 1 1 1 Microtubule binding Bac_DnaA PF00308.18 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_1 - 0.065 13.1 0.0 0.076 12.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein PIF1 PF05970.14 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_1 - 0.077 12.2 0.1 0.1 11.7 0.1 1.2 1 0 0 1 1 1 0 PIF1-like helicase DUF2756 PF10956.8 NODE_61155_length_268_cov_2.115880_g53215_i0forward_frame_1 - 0.00082 19.8 6.0 0.00092 19.7 6.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2756) SHR-BD PF06650.12 NODE_61152_length_268_cov_2.154506_g53212_i0reverse_frame_1 - 0.036 13.4 0.0 0.038 13.4 0.0 1.0 1 0 0 1 1 1 0 SHR-binding domain of vacuolar-sorting associated protein 13 Podoplanin PF05808.11 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_1 - 0.037 14.1 0.0 0.045 13.9 0.0 1.1 1 0 0 1 1 1 0 Podoplanin ShK PF01549.24 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_1 - 0.34 11.5 9.3 1 9.9 9.3 2.0 1 1 0 1 1 1 0 ShK domain-like Nucleoside_tran PF01733.18 NODE_61148_length_268_cov_2.214592_g53208_i0reverse_frame_1 - 0.00016 21.2 2.9 0.00018 21.0 2.9 1.0 1 0 0 1 1 1 1 Nucleoside transporter V4R PF02830.18 NODE_61143_length_268_cov_2.330472_g53203_i0reverse_frame_1 - 0.054 13.5 3.5 0.58 10.2 0.1 2.9 2 1 1 3 3 3 0 V4R domain Antimicrobial14 PF08109.11 NODE_61143_length_268_cov_2.330472_g53203_i0reverse_frame_1 - 9.2 6.4 8.7 6.2 6.9 1.8 3.0 2 1 1 3 3 3 0 Lactocin 705 family N6_Mtase PF02384.16 NODE_61139_length_268_cov_2.420601_g53199_i0reverse_frame_1 - 0.13 11.5 1.1 0.14 11.4 1.1 1.1 1 0 0 1 1 1 0 N-6 DNA Methylase KaiA PF07688.12 NODE_61138_length_268_cov_2.429185_g53198_i0reverse_frame_1 - 0.0086 16.2 0.1 0.0094 16.1 0.1 1.2 1 0 0 1 1 1 1 KaiA C-terminal domain Radical_SAM_C PF16199.5 NODE_61138_length_268_cov_2.429185_g53198_i0forward_frame_1 - 0.0013 18.7 0.1 0.0016 18.4 0.1 1.2 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Lamprin PF06403.11 NODE_61135_length_268_cov_2.459227_g53195_i0forward_frame_1 - 0.0081 16.1 7.3 0.0095 15.9 7.3 1.1 1 0 0 1 1 1 1 Lamprin WD40 PF00400.32 NODE_61131_length_268_cov_2.510730_g53191_i0forward_frame_1 - 4e-07 30.6 0.0 0.3 12.0 0.0 3.1 3 0 0 3 3 3 3 WD domain, G-beta repeat ArfGap PF01412.18 NODE_61130_length_268_cov_2.583691_g53190_i0reverse_frame_1 - 6.9e-05 22.9 0.0 0.00027 21.0 0.0 1.8 1 1 0 1 1 1 1 Putative GTPase activating protein for Arf JSRP PF15312.6 NODE_61126_length_268_cov_2.819742_g53186_i0forward_frame_1 - 2.2 8.2 5.5 3.8 7.5 5.5 1.4 1 0 0 1 1 1 0 Junctional sarcoplasmic reticulum protein Herpes_UL73 PF03554.13 NODE_61122_length_268_cov_3.163090_g53182_i0reverse_frame_1 - 0.026 14.5 3.7 0.04 13.9 3.7 1.3 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein GMP_synt_C PF00958.22 NODE_61122_length_268_cov_3.163090_g53182_i0forward_frame_1 - 0.057 13.5 0.0 0.069 13.2 0.0 1.3 1 1 0 1 1 1 0 GMP synthase C terminal domain vMSA PF00695.19 NODE_61120_length_268_cov_3.197425_g53180_i0reverse_frame_1 - 0.028 13.5 5.3 0.031 13.4 5.3 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF1891 PF09004.10 NODE_61116_length_268_cov_4.351931_g53176_i0reverse_frame_1 - 2.2 7.9 6.1 0.44 10.2 0.3 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF1891) Peptidase_C92 PF05708.12 NODE_61116_length_268_cov_4.351931_g53176_i0forward_frame_1 - 0.023 14.8 0.0 0.027 14.6 0.0 1.1 1 0 0 1 1 1 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family DUF1302 PF06980.11 NODE_61112_length_268_cov_33.600858_g53172_i0forward_frame_1 - 0.033 12.8 0.4 0.041 12.5 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1302) Poty_PP PF08440.10 NODE_61098_length_268_cov_70.643777_g53158_i0reverse_frame_1 - 0.054 12.6 0.1 0.063 12.4 0.1 1.1 1 0 0 1 1 1 0 Potyviridae polyprotein BCIP PF13862.6 NODE_61098_length_268_cov_70.643777_g53158_i0reverse_frame_1 - 0.1 12.4 0.2 0.11 12.2 0.2 1.1 1 0 0 1 1 1 0 p21-C-terminal region-binding protein TerY_C PF15616.6 NODE_61097_length_268_cov_70.982833_g53157_i0reverse_frame_1 - 0.024 14.8 0.1 0.031 14.4 0.1 1.3 1 0 0 1 1 1 0 TerY-C metal binding domain stn_TNFRSF12A PF12191.8 NODE_61095_length_268_cov_73.004292_g53155_i0forward_frame_1 - 0.0064 16.7 0.1 0.0074 16.5 0.1 1.2 1 0 0 1 1 1 1 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain DUF4839 PF16127.5 NODE_61093_length_268_cov_76.103004_g53153_i0reverse_frame_1 - 0.05 13.7 0.3 0.055 13.6 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4839) NifZ PF04319.13 NODE_61093_length_268_cov_76.103004_g53153_i0reverse_frame_1 - 0.087 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 NifZ domain Ig_6 PF18452.1 NODE_61081_length_268_cov_127.793991_g53141_i0reverse_frame_1 - 0.0015 18.0 2.2 0.0029 17.1 1.6 1.7 2 0 0 2 2 2 1 Immunoglobulin domain AgrB PF04647.15 NODE_61080_length_268_cov_142.334764_g53140_i0reverse_frame_1 - 0.0031 16.9 0.4 0.0037 16.6 0.4 1.1 1 0 0 1 1 1 1 Accessory gene regulator B TMEM164 PF14808.6 NODE_61080_length_268_cov_142.334764_g53140_i0reverse_frame_1 - 0.02 14.2 0.3 0.025 13.9 0.3 1.0 1 0 0 1 1 1 0 TMEM164 family PIG-F PF06699.11 NODE_61080_length_268_cov_142.334764_g53140_i0reverse_frame_1 - 0.074 13.2 0.3 0.082 13.1 0.3 1.1 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F HARP PF07443.13 NODE_61080_length_268_cov_142.334764_g53140_i0reverse_frame_1 - 0.16 11.7 2.4 0.38 10.4 0.8 2.0 2 0 0 2 2 2 0 HepA-related protein (HARP) CPW_WPC PF09717.10 NODE_61074_length_268_cov_284.197425_g53134_i0reverse_frame_1 - 0.012 16.6 0.8 0.012 16.6 0.8 2.0 1 1 1 2 2 2 0 Plasmodium falciparum domain of unknown function (CPW_WPC) VEGF_C PF14554.6 NODE_61074_length_268_cov_284.197425_g53134_i0forward_frame_1 - 0.098 12.8 3.3 0.23 11.6 3.3 1.7 1 1 0 1 1 1 0 VEGF heparin-binding domain Dpy19 PF10034.9 NODE_61070_length_268_cov_587.244635_g53130_i0reverse_frame_1 - 0.062 11.5 7.3 0.065 11.4 7.3 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation GBP_PSP PF02425.15 NODE_61066_length_269_cov_1.021368_g53126_i0forward_frame_1 - 0.11 12.2 0.1 0.19 11.4 0.1 1.4 1 0 0 1 1 1 0 Paralytic/GBP/PSP peptide DUF3504 PF12012.8 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 0.0014 18.6 7.5 0.0016 18.4 7.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3504) RNA_pol_Rpc4 PF05132.14 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 0.15 12.5 10.4 0.15 12.5 10.4 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF4820 PF16091.5 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 0.62 9.4 9.3 0.66 9.3 9.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) SR-25 PF10500.9 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 0.69 9.5 31.1 0.75 9.4 31.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF913 PF06025.12 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 1.5 7.7 7.9 1.7 7.6 7.9 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Mem_trans PF03547.18 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 2.2 6.6 2.8 2.3 6.5 2.8 1.0 1 0 0 1 1 1 0 Membrane transport protein CDC45 PF02724.14 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 2.5 6.3 15.4 2.5 6.3 15.4 1.1 1 0 0 1 1 1 0 CDC45-like protein Med19 PF10278.9 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 2.5 8.0 26.1 3 7.7 26.1 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Zip PF02535.22 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 5.3 6.2 11.9 5.3 6.1 11.9 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Ureide_permease PF07168.11 NODE_61057_length_269_cov_1.183761_g53117_i0reverse_frame_1 - 6.6 5.4 9.5 7.5 5.2 9.5 1.0 1 0 0 1 1 1 0 Ureide permease Toxin_5 PF05294.13 NODE_61055_length_269_cov_1.196581_g53115_i0reverse_frame_1 - 0.0044 17.4 1.1 0.0044 17.4 1.1 1.7 2 0 0 2 2 2 1 Scorpion short toxin DUF2072 PF09845.9 NODE_61055_length_269_cov_1.196581_g53115_i0reverse_frame_1 - 0.057 13.7 0.3 0.065 13.5 0.3 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein DUF4823 PF16105.5 NODE_61051_length_269_cov_1.269231_g53111_i0forward_frame_1 - 0.014 15.3 0.0 0.02 14.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4823) Stomagen PF16851.5 NODE_61046_length_269_cov_1.358974_g53106_i0reverse_frame_1 - 0.02 14.9 0.0 0.028 14.4 0.0 1.2 1 0 0 1 1 1 0 Stomagen Sir1 PF11603.8 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_1 - 0.014 15.9 1.6 0.017 15.6 1.6 1.1 1 0 0 1 1 1 0 Regulatory protein Sir1 Dpy-30 PF05186.13 NODE_61043_length_269_cov_1.384615_g53103_i0reverse_frame_1 - 0.058 13.1 0.0 0.09 12.5 0.0 1.3 1 0 0 1 1 1 0 Dpy-30 motif UT PF03253.14 NODE_61038_length_269_cov_1.491453_g53098_i0forward_frame_1 - 0.075 12.2 0.0 0.084 12.0 0.0 1.1 1 0 0 1 1 1 0 Urea transporter Cyclophil_like2 PF18050.1 NODE_61038_length_269_cov_1.491453_g53098_i0forward_frame_1 - 0.099 12.6 0.2 0.13 12.2 0.2 1.2 1 0 0 1 1 1 0 Cyclophilin-like family SlyX PF04102.12 NODE_61034_length_269_cov_1.529915_g53094_i0reverse_frame_1 - 0.15 12.7 0.7 1.3 9.7 0.1 2.1 1 1 1 2 2 2 0 SlyX BT1 PF03092.16 NODE_61030_length_269_cov_1.589744_g53090_i0forward_frame_1 - 1 7.5 6.3 1.1 7.4 6.3 1.0 1 0 0 1 1 1 0 BT1 family Cation_efflux PF01545.21 NODE_61024_length_269_cov_1.679487_g53084_i0reverse_frame_1 - 0.00018 21.3 5.1 0.00022 21.0 5.1 1.1 1 0 0 1 1 1 1 Cation efflux family GlutR_dimer PF00745.20 NODE_61024_length_269_cov_1.679487_g53084_i0forward_frame_1 - 0.14 12.6 0.1 0.17 12.4 0.1 1.2 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain Glyco_transf_6 PF03414.13 NODE_61024_length_269_cov_1.679487_g53084_i0forward_frame_1 - 0.17 10.7 0.1 0.18 10.6 0.1 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 6 DUF3557 PF12078.8 NODE_61017_length_269_cov_1.739316_g53077_i0forward_frame_1 - 0.012 15.6 0.4 0.015 15.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3557) DUF229 PF02995.17 NODE_61007_length_269_cov_1.816239_g53067_i0forward_frame_1 - 3.3e-06 26.0 0.1 4e-06 25.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) EF-hand_6 PF13405.6 NODE_61005_length_269_cov_1.829060_g53065_i0reverse_frame_1 - 0.00017 21.2 0.1 0.00029 20.5 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_61005_length_269_cov_1.829060_g53065_i0reverse_frame_1 - 0.011 15.2 0.0 0.018 14.5 0.0 1.4 1 0 0 1 1 1 0 EF hand DUF3175 PF11373.8 NODE_61005_length_269_cov_1.829060_g53065_i0reverse_frame_1 - 0.12 12.6 0.1 0.16 12.1 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3175) zf-CRD PF17979.1 NODE_61003_length_269_cov_1.850427_g53063_i0forward_frame_1 - 0.025 14.7 1.6 0.029 14.5 1.6 1.1 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions Pkinase PF00069.25 NODE_61000_length_269_cov_1.905983_g53060_i0forward_frame_1 - 8.2e-09 35.2 0.0 9.6e-09 35.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_61000_length_269_cov_1.905983_g53060_i0forward_frame_1 - 0.04 13.2 0.0 0.049 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase Viral_Hsp90 PF03225.14 NODE_60986_length_269_cov_2.282051_g53046_i0reverse_frame_1 - 0.054 12.0 0.0 0.06 11.9 0.0 1.0 1 0 0 1 1 1 0 Viral heat shock protein Hsp90 homologue LPD22 PF18834.1 NODE_60981_length_269_cov_2.376068_g53041_i0forward_frame_1 - 0.007 16.6 0.1 0.009 16.2 0.1 1.1 1 0 0 1 1 1 1 Large polyvalent protein associated domain 22 MIF PF01187.18 NODE_60980_length_269_cov_2.478632_g53040_i0forward_frame_1 - 0.22 11.8 0.1 0.28 11.5 0.1 1.1 1 0 0 1 1 1 0 Macrophage migration inhibitory factor (MIF) IBR PF01485.21 NODE_60978_length_269_cov_2.534188_g53038_i0forward_frame_1 - 1.8e-05 24.9 4.2 2.7e-05 24.3 4.2 1.3 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain C2 PF00168.30 NODE_60973_length_269_cov_2.649573_g53033_i0reverse_frame_1 - 0.0037 17.5 0.0 0.0054 17.0 0.0 1.3 1 0 0 1 1 1 1 C2 domain TMEM18 PF14770.6 NODE_60973_length_269_cov_2.649573_g53033_i0forward_frame_1 - 0.066 13.2 1.3 0.084 12.9 1.3 1.3 1 0 0 1 1 1 0 Transmembrane protein 18 DUF2012 PF09430.10 NODE_60972_length_269_cov_2.653846_g53032_i0reverse_frame_1 - 0.023 14.8 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2012) TMEM132D_C PF15706.5 NODE_60948_length_269_cov_33.867521_g53008_i0forward_frame_1 - 4.6 7.1 5.1 7.3 6.4 5.1 1.3 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term PBP_sp32 PF07222.12 NODE_60936_length_269_cov_55.495726_g52996_i0forward_frame_1 - 0.31 10.5 5.0 0.44 10.0 5.0 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 EBV-NA3 PF05009.12 NODE_60930_length_269_cov_62.717949_g52990_i0reverse_frame_1 - 0.026 14.0 3.0 0.027 14.0 3.0 1.2 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) TRAM1 PF08390.11 NODE_60924_length_269_cov_73.102564_g52984_i0forward_frame_1 - 0.18 11.5 1.2 0.37 10.5 1.2 1.5 1 0 0 1 1 1 0 TRAM1-like protein Gliadin PF13016.6 NODE_60923_length_269_cov_78.397436_g52983_i0reverse_frame_1 - 0.22 11.9 3.7 1.9 9.0 0.2 2.2 2 0 0 2 2 2 0 Cys-rich Gliadin N-terminal IGFBP PF00219.18 NODE_60920_length_269_cov_94.179487_g52980_i0forward_frame_1 - 0.21 12.3 0.2 0.21 12.3 0.2 2.2 2 0 0 2 2 2 0 Insulin-like growth factor binding protein Glutaredoxin2_C PF04399.13 NODE_60917_length_269_cov_100.358974_g52977_i0reverse_frame_1 - 0.12 12.3 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain PRT_C PF08372.10 NODE_60910_length_269_cov_146.641026_g52970_i0reverse_frame_1 - 0.082 12.7 1.1 0.098 12.4 1.1 1.0 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal UL42 PF17638.2 NODE_60898_length_269_cov_298.034188_g52958_i0forward_frame_1 - 0.094 12.7 1.9 0.12 12.4 1.9 1.2 1 0 0 1 1 1 0 HCMV UL42 Doppel PF11466.8 NODE_60894_length_269_cov_736.470085_g52954_i0forward_frame_1 - 3.6 7.3 7.5 1.3 8.7 4.7 1.6 2 0 0 2 2 2 0 Prion-like protein Doppel Pkinase PF00069.25 NODE_60892_length_269_cov_903.106838_g52952_i0forward_frame_1 - 0.0002 20.8 0.0 0.00025 20.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DUF1593 PF07632.11 NODE_60890_length_269_cov_2078.914530_g52950_i0forward_frame_1 - 0.22 10.9 0.0 0.26 10.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1593) S1-P1_nuclease PF02265.16 NODE_60889_length_269_cov_3564.004274_g52949_i0reverse_frame_1 - 0.00028 20.8 0.0 0.00036 20.4 0.0 1.2 1 0 0 1 1 1 1 S1/P1 Nuclease YflT PF11181.8 NODE_60889_length_269_cov_3564.004274_g52949_i0reverse_frame_1 - 0.06 13.9 0.1 0.073 13.6 0.1 1.2 1 0 0 1 1 1 0 Heat induced stress protein YflT HEV_ORF1 PF02444.16 NODE_60885_length_270_cov_1.021277_g52945_i0reverse_frame_1 - 2.3 8.8 7.5 2.7 8.6 7.5 1.3 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) TMEM37 PF15108.6 NODE_60883_length_270_cov_1.076596_g52943_i0reverse_frame_1 - 0.0037 17.2 0.0 0.0053 16.7 0.0 1.2 1 0 0 1 1 1 1 Voltage-dependent calcium channel gamma-like subunit protein family SBP PF03110.14 NODE_60871_length_270_cov_1.361702_g52931_i0forward_frame_1 - 0.007 16.6 0.2 0.009 16.3 0.2 1.2 1 0 0 1 1 1 1 SBP domain GFO_IDH_MocA PF01408.22 NODE_60869_length_270_cov_1.382979_g52929_i0reverse_frame_1 - 1.1e-09 39.1 0.0 1.4e-09 38.8 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold DUF4567 PF15131.6 NODE_60869_length_270_cov_1.382979_g52929_i0reverse_frame_1 - 0.1 12.6 0.5 0.28 11.2 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4567) TipE PF16972.5 NODE_60868_length_270_cov_1.382979_g52928_i0forward_frame_1 - 0.027 13.7 0.1 0.028 13.6 0.1 1.1 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE Cullin PF00888.22 NODE_60861_length_270_cov_1.574468_g52921_i0reverse_frame_1 - 3.1e-09 36.0 1.4 3.3e-09 35.9 1.4 1.0 1 0 0 1 1 1 1 Cullin family Spike_torovirin PF17072.5 NODE_60855_length_270_cov_1.706383_g52915_i0reverse_frame_1 - 0.029 11.5 0.6 0.034 11.3 0.6 1.0 1 0 0 1 1 1 0 Torovirinae spike glycoprotein FAP PF07174.11 NODE_60849_length_270_cov_1.770213_g52909_i0reverse_frame_1 - 3.2 7.1 12.5 3.5 7.0 12.5 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_60849_length_270_cov_1.770213_g52909_i0forward_frame_1 - 0.13 12.2 5.7 0.4 10.7 5.7 1.8 1 1 0 1 1 1 0 Lamprin Rubredoxin_2 PF18073.1 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 0.039 13.7 3.4 0.039 13.7 3.4 2.9 3 0 0 3 3 3 0 Rubredoxin metal binding domain HypA PF01155.19 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 0.49 10.4 7.9 0.45 10.5 5.1 1.9 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ogr_Delta PF04606.12 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 0.77 9.8 12.5 0.68 10.0 1.4 3.2 3 0 0 3 3 3 0 Ogr/Delta-like zinc finger Zn-ribbon_8 PF09723.10 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 0.99 9.6 14.2 0.58 10.3 0.9 3.3 2 1 2 4 4 4 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 2.4 7.7 12.5 3.6 7.1 0.1 3.7 4 0 0 4 4 4 0 zinc-ribbon domain NMD3 PF04981.13 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 3.3 7.1 5.2 2.9 7.3 0.8 2.0 2 0 0 2 2 2 0 NMD3 family zf-RRN7 PF11781.8 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 5.4 6.8 11.9 6.8 6.5 0.1 3.3 3 1 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 PhnA_Zn_Ribbon PF08274.12 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 9.7 6.3 13.2 0.35 10.8 0.6 2.9 4 0 0 4 4 4 0 PhnA Zinc-Ribbon zinc_ribbon_2 PF13240.6 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_1 - 9.7 6.1 13.5 3.3 7.6 1.1 3.5 4 0 0 4 4 4 0 zinc-ribbon domain AAA_30 PF13604.6 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_1 - 2.6e-09 37.1 0.0 2.7e-09 37.0 0.0 1.0 1 0 0 1 1 1 1 AAA domain PIF1 PF05970.14 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_1 - 0.0018 17.5 0.5 0.0032 16.7 0.5 1.5 1 1 0 1 1 1 1 PIF1-like helicase Peptidase_C92 PF05708.12 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_1 - 0.026 14.6 0.0 0.031 14.4 0.0 1.1 1 0 0 1 1 1 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AAA_19 PF13245.6 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_1 - 0.044 14.1 0.2 0.056 13.8 0.2 1.2 1 0 0 1 1 1 0 AAA domain SBF_like PF13593.6 NODE_60827_length_270_cov_2.225532_g52887_i0reverse_frame_1 - 3.3e-19 69.3 1.7 3.7e-19 69.2 1.7 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) DUF1275 PF06912.11 NODE_60827_length_270_cov_2.225532_g52887_i0reverse_frame_1 - 0.024 14.6 4.4 0.027 14.4 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1275) Tlr3_TMD PF17968.1 NODE_60827_length_270_cov_2.225532_g52887_i0reverse_frame_1 - 7.5 6.8 11.4 4 7.7 0.3 3.1 3 0 0 3 3 3 0 Toll-like receptor 3 trans-membrane domain GASA PF02704.14 NODE_60826_length_270_cov_2.255319_g52886_i0forward_frame_1 - 0.017 15.2 0.6 0.022 14.9 0.6 1.1 1 0 0 1 1 1 0 Gibberellin regulated protein DUF898 PF05987.13 NODE_60823_length_270_cov_2.404255_g52883_i0forward_frame_1 - 9.7e-13 47.9 4.7 1e-12 47.8 4.7 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF898) TfoX_N PF04993.13 NODE_60819_length_270_cov_2.634043_g52879_i0forward_frame_1 - 4.2e-07 30.1 0.1 5.9e-07 29.6 0.1 1.2 1 0 0 1 1 1 1 TfoX N-terminal domain TfoX_C PF04994.13 NODE_60819_length_270_cov_2.634043_g52879_i0forward_frame_1 - 1.2e-06 28.5 0.1 7e-06 26.0 0.0 2.0 2 1 0 2 2 2 1 TfoX C-terminal domain SBP_bac_5 PF00496.22 NODE_60817_length_270_cov_2.672340_g52877_i0reverse_frame_1 - 1e-12 47.7 0.0 1.2e-12 47.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Mucin PF01456.17 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_1 - 0.0086 16.1 13.4 0.013 15.5 13.4 1.2 1 0 0 1 1 1 1 Mucin-like glycoprotein DUF2207 PF09972.9 NODE_60809_length_270_cov_3.000000_g52869_i0forward_frame_1 - 4.5 5.9 6.2 4.7 5.8 6.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Adipokin_hormo PF06377.11 NODE_60802_length_270_cov_3.893617_g52862_i0forward_frame_1 - 0.055 13.8 0.1 0.1 12.9 0.1 1.7 1 0 0 1 1 1 0 Adipokinetic hormone Methyltrn_RNA_4 PF09936.9 NODE_60801_length_270_cov_5.102128_g52861_i0forward_frame_1 - 0.052 13.4 0.0 0.059 13.2 0.0 1.0 1 0 0 1 1 1 0 SAM-dependent RNA methyltransferase Nramp PF01566.18 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_1 - 0.0021 17.1 2.0 0.0024 16.9 2.0 1.1 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein DUF4389 PF14333.6 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_1 - 0.14 12.1 7.7 0.23 11.4 7.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4389) Shisa PF13908.6 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_1 - 1.3 9.2 6.3 1.3 9.2 6.3 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF3357 PF11837.8 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_1 - 1.8 9.1 3.9 2.1 8.9 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) MTABC_N PF16185.5 NODE_60799_length_270_cov_15.774468_g52859_i0reverse_frame_1 - 0.017 14.6 0.1 0.02 14.4 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region zf-H2C2_2 PF13465.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_1 - 0.0024 18.2 3.5 0.0024 18.2 3.5 2.3 3 1 0 3 3 3 1 Zinc-finger double domain YhfH PF14149.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_1 - 0.0025 17.7 1.0 0.0025 17.7 1.0 1.6 2 0 0 2 2 2 1 YhfH-like protein Metallothio_Pro PF02069.16 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_1 - 0.0092 16.2 2.1 0.51 10.6 0.5 2.1 2 0 0 2 2 2 2 Prokaryotic metallothionein DUF4210 PF13915.6 NODE_60794_length_270_cov_44.093617_g52854_i0forward_frame_1 - 0.03 14.9 0.5 0.051 14.2 0.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4210) zf-C3HC4_4 PF15227.6 NODE_60794_length_270_cov_44.093617_g52854_i0forward_frame_1 - 0.38 10.9 9.9 0.12 12.6 4.0 2.4 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING S_4TM PF18159.1 NODE_60791_length_270_cov_46.668085_g52851_i0forward_frame_1 - 0.014 14.7 0.1 0.016 14.6 0.1 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain CsoSCA PF08936.10 NODE_60790_length_270_cov_48.229787_g52850_i0forward_frame_1 - 0.14 10.8 0.2 0.13 10.8 0.2 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase zf-C2H2_3 PF13878.6 NODE_60787_length_270_cov_54.225532_g52847_i0reverse_frame_1 - 0.054 13.3 0.5 0.1 12.4 0.5 1.5 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO Endothelin PF00322.17 NODE_60781_length_270_cov_61.774468_g52841_i0reverse_frame_1 - 1.2 8.8 7.3 1.5 8.5 4.6 2.1 2 0 0 2 2 2 0 Endothelin family zf-HC3 PF16827.5 NODE_60780_length_270_cov_62.157447_g52840_i0forward_frame_1 - 0.0024 18.1 4.6 0.65 10.3 1.6 2.3 2 0 0 2 2 2 2 zinc-finger PhoLip_ATPase_C PF16212.5 NODE_60773_length_270_cov_68.395745_g52833_i0reverse_frame_1 - 0.062 13.0 0.1 0.064 13.0 0.1 1.0 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal DNA_processg_A PF02481.15 NODE_60771_length_270_cov_74.574468_g52831_i0reverse_frame_1 - 0.083 12.1 0.0 0.1 11.8 0.0 1.1 1 0 0 1 1 1 0 DNA recombination-mediator protein A Perm-CXXC PF15629.6 NODE_60763_length_270_cov_94.821277_g52823_i0forward_frame_1 - 0.013 15.7 1.0 0.026 14.8 1.0 1.5 1 0 0 1 1 1 0 Permuted single zf-CXXC unit DUF5426 PF17473.2 NODE_60763_length_270_cov_94.821277_g52823_i0forward_frame_1 - 0.017 15.4 0.1 0.022 15.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5426) FlhE PF06366.13 NODE_60763_length_270_cov_94.821277_g52823_i0forward_frame_1 - 0.083 12.9 0.0 0.09 12.8 0.0 1.1 1 0 0 1 1 1 0 Flagellar protein FlhE DUF3902 PF13042.6 NODE_60760_length_270_cov_114.902128_g52820_i0forward_frame_1 - 0.014 15.0 0.2 0.017 14.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3902) DUF4522 PF15022.6 NODE_60757_length_270_cov_134.561702_g52817_i0reverse_frame_1 - 0.039 14.2 0.0 0.049 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) P5-ATPase PF12409.8 NODE_60752_length_270_cov_182.046809_g52812_i0forward_frame_1 - 0.089 12.9 1.0 0.12 12.4 1.0 1.2 1 0 0 1 1 1 0 P5-type ATPase cation transporter MTBP_mid PF14919.6 NODE_60751_length_270_cov_201.697872_g52811_i0forward_frame_1 - 0.031 13.5 0.0 0.031 13.5 0.0 1.1 1 0 0 1 1 1 0 MDM2-binding RCC1_2 PF13540.6 NODE_60747_length_270_cov_265.280851_g52807_i0reverse_frame_1 - 0.00056 19.6 1.4 0.09 12.6 0.1 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat AFP_2 PF18815.1 NODE_60747_length_270_cov_265.280851_g52807_i0reverse_frame_1 - 0.13 12.5 2.9 0.63 10.3 0.4 2.3 1 1 1 2 2 2 0 Bacterial antifreeze protein repeat PheRS_DBD2 PF18554.1 NODE_60747_length_270_cov_265.280851_g52807_i0reverse_frame_1 - 2.7 8.1 8.1 6.3 6.9 0.8 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Tat PF00539.18 NODE_60744_length_270_cov_311.757447_g52804_i0reverse_frame_1 - 0.077 13.2 2.3 0.17 12.0 2.3 1.7 1 1 0 1 1 1 0 Transactivating regulatory protein (Tat) RNA_pol_Rpb4 PF03874.16 NODE_60740_length_270_cov_518.838298_g52800_i0forward_frame_1 - 0.075 13.4 0.4 0.53 10.6 0.4 1.9 1 1 0 1 1 1 0 RNA polymerase Rpb4 OAD_gamma PF04277.13 NODE_60737_length_270_cov_1207.140426_g52797_i0reverse_frame_1 - 0.54 10.9 2.5 0.85 10.2 2.5 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Ig_6 PF18452.1 NODE_60732_length_271_cov_1.016949_g52792_i0reverse_frame_3 - 0.98 9.0 4.7 10 5.8 0.2 2.2 2 0 0 2 2 2 0 Immunoglobulin domain TMEM51 PF15345.6 NODE_60729_length_271_cov_1.182203_g52789_i0forward_frame_2 - 0.32 10.8 2.8 0.33 10.8 2.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 DUF2616 PF11077.8 NODE_60728_length_271_cov_1.182203_g52788_i0forward_frame_3 - 0.0063 16.2 6.2 0.0072 16.0 6.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2616) AGH PF17558.2 NODE_60726_length_271_cov_1.279661_g52786_i0forward_frame_3 - 0.043 14.0 0.3 0.052 13.7 0.3 1.1 1 0 0 1 1 1 0 Androgenic gland hormone DUF4820 PF16091.5 NODE_60726_length_271_cov_1.279661_g52786_i0forward_frame_3 - 0.07 12.5 1.0 0.084 12.2 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Ndc1_Nup PF09531.10 NODE_60724_length_271_cov_1.330508_g52784_i0reverse_frame_2 - 0.26 9.9 3.7 0.27 9.9 3.7 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Tubulin_C PF03953.17 NODE_60723_length_271_cov_1.338983_g52783_i0reverse_frame_3 - 0.00035 20.7 0.0 0.00045 20.4 0.0 1.2 1 0 0 1 1 1 1 Tubulin C-terminal domain Ligase_CoA PF00549.19 NODE_60718_length_271_cov_1.355932_g52778_i0forward_frame_2 - 2.7e-19 69.5 0.3 2.9e-19 69.4 0.3 1.0 1 0 0 1 1 1 1 CoA-ligase DUF2684 PF10885.8 NODE_60717_length_271_cov_1.398305_g52777_i0forward_frame_3 - 1.4 9.1 6.2 0.31 11.2 2.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2684) DUF1043 PF06295.12 NODE_60717_length_271_cov_1.398305_g52777_i0forward_frame_2 - 0.016 15.2 0.4 0.019 15.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) DUF1029 PF06269.12 NODE_60714_length_271_cov_1.508475_g52774_i0reverse_frame_3 - 0.0029 17.7 0.3 0.0078 16.3 0.3 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1029) DLIC PF05783.11 NODE_60714_length_271_cov_1.508475_g52774_i0forward_frame_2 - 0.15 10.8 0.3 0.19 10.5 0.3 1.0 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) DUF1408 PF07193.11 NODE_60710_length_271_cov_1.656780_g52770_i0forward_frame_2 - 0.043 14.0 0.1 0.072 13.2 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1408) SET PF00856.28 NODE_60710_length_271_cov_1.656780_g52770_i0forward_frame_2 - 0.069 13.5 0.4 0.23 11.8 0.4 1.7 1 1 0 1 1 1 0 SET domain MNSV_P7B PF06692.11 NODE_60703_length_271_cov_1.800847_g52763_i0reverse_frame_3 - 0.075 13.0 5.9 0.23 11.5 0.8 2.1 1 1 1 2 2 2 0 Melon necrotic spot virus P7B protein Glyco_hydro_11 PF00457.17 NODE_60703_length_271_cov_1.800847_g52763_i0reverse_frame_2 - 0.067 12.8 0.6 0.069 12.8 0.6 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 11 His_Phos_2 PF00328.22 NODE_60703_length_271_cov_1.800847_g52763_i0forward_frame_3 - 0.0092 15.4 0.0 0.0092 15.4 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Mo25 PF08569.11 NODE_60702_length_271_cov_1.805085_g52762_i0reverse_frame_3 - 0.0058 16.0 1.4 0.006 16.0 1.4 1.2 1 0 0 1 1 1 1 Mo25-like Ku_C PF03730.14 NODE_60702_length_271_cov_1.805085_g52762_i0reverse_frame_3 - 0.042 14.6 0.0 0.051 14.3 0.0 1.2 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm SNF PF00209.18 NODE_60701_length_271_cov_1.822034_g52761_i0reverse_frame_2 - 0.58 8.8 1.4 0.6 8.7 1.4 1.1 1 0 0 1 1 1 0 Sodium:neurotransmitter symporter family IPK PF03770.16 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_2 - 0.14 12.0 1.1 0.31 10.9 1.1 1.7 1 1 0 1 1 1 0 Inositol polyphosphate kinase Lamprin PF06403.11 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_2 - 0.4 10.6 7.1 0.58 10.1 2.3 2.0 1 1 1 2 2 2 0 Lamprin RAP1 PF07218.11 NODE_60700_length_271_cov_1.838983_g52760_i0forward_frame_2 - 5.1 5.2 4.8 6.3 5.0 4.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) GATA PF00320.27 NODE_60698_length_271_cov_1.894068_g52758_i0reverse_frame_3 - 0.16 11.6 2.1 1.2 8.8 0.1 2.3 2 0 0 2 2 2 0 GATA zinc finger Viral_P18 PF04521.13 NODE_60691_length_271_cov_2.135593_g52751_i0forward_frame_3 - 0.48 10.2 1.8 0.64 9.8 0.2 1.9 1 1 1 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein DUF4441 PF14536.6 NODE_60690_length_271_cov_2.135593_g52750_i0reverse_frame_2 - 0.011 15.9 0.5 0.015 15.5 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) DUF4770 PF15994.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 0.014 15.6 5.9 0.018 15.3 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) Topoisom_I_N PF02919.15 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 0.026 14.0 5.0 0.031 13.8 5.0 1.1 1 0 0 1 1 1 0 Eukaryotic DNA topoisomerase I, DNA binding fragment DUF4834 PF16118.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 0.24 12.4 6.4 0.26 12.3 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Presenilin PF01080.17 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 1.1 7.9 5.1 1.1 7.9 5.1 1.0 1 0 0 1 1 1 0 Presenilin CSG2 PF16965.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 2.6 6.9 5.4 2.9 6.7 5.4 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator Otopetrin PF03189.13 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 4 6.2 8.9 4.5 6.0 8.9 1.0 1 0 0 1 1 1 0 Otopetrin Peptidase_S49_N PF08496.10 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_3 - 8.8 6.4 9.2 11 6.1 9.2 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Ipi1_N PF12333.8 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.041 14.5 3.5 0.045 14.3 3.5 1.1 1 0 0 1 1 1 0 Rix1 complex component involved in 60S ribosome maturation Connexin PF00029.19 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.3 10.8 6.0 0.31 10.8 6.0 1.1 1 0 0 1 1 1 0 Connexin DUF4834 PF16118.5 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.38 11.7 9.0 0.43 11.6 9.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Peptidase_S49_N PF08496.10 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.42 10.7 11.6 0.49 10.5 11.6 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Kei1 PF08552.11 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 0.62 9.9 4.0 0.65 9.9 4.0 1.2 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 Folate_carrier PF01770.18 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 1.2 7.8 7.4 1.3 7.7 7.4 1.0 1 0 0 1 1 1 0 Reduced folate carrier CLN3 PF02487.17 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 1.2 8.1 5.2 1.3 8.0 5.2 1.1 1 0 0 1 1 1 0 CLN3 protein Presenilin PF01080.17 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 2.1 7.0 9.0 2.1 7.0 9.0 1.1 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 2.2 7.4 5.8 2.2 7.4 5.8 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Rsc14 PF08586.10 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 2.7 8.9 12.7 27 5.6 12.7 1.9 1 1 0 1 1 1 0 RSC complex, Rsc14/Ldb7 subunit EIIBC-GUT_N PF03612.14 NODE_60688_length_271_cov_2.165254_g52748_i0reverse_frame_2 - 8.4 6.1 10.3 4 7.1 8.4 1.5 2 0 0 2 2 2 0 Sorbitol phosphotransferase enzyme II N-terminus Orthoreo_P10 PF07204.11 NODE_60688_length_271_cov_2.165254_g52748_i0forward_frame_3 - 4.7 7.2 11.3 10 6.2 11.3 1.8 1 1 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 Glyco_transf_41 PF13844.6 NODE_60687_length_271_cov_2.173729_g52747_i0reverse_frame_2 - 0.15 10.5 0.2 0.16 10.3 0.2 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 41 DUF4167 PF13763.6 NODE_60685_length_271_cov_2.182203_g52745_i0reverse_frame_2 - 0.084 13.0 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4167) Bromo_MP PF01573.16 NODE_60683_length_271_cov_2.372881_g52743_i0forward_frame_2 - 0.0041 16.5 0.7 0.0048 16.3 0.7 1.0 1 0 0 1 1 1 1 Bromovirus movement protein YesK PF14150.6 NODE_60682_length_271_cov_2.377119_g52742_i0reverse_frame_2 - 0.061 13.5 2.1 0.081 13.1 2.1 1.2 1 0 0 1 1 1 0 YesK-like protein DUF202 PF02656.15 NODE_60682_length_271_cov_2.377119_g52742_i0reverse_frame_2 - 0.11 12.9 0.1 0.14 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF202) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks296.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks296.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks296.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks296.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-C6H2 PF15801.5 NODE_60681_length_271_cov_2.377119_g52741_i0reverse_frame_3 - 0.071 13.4 3.3 0.16 12.3 3.3 1.7 1 1 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding EntA_Immun PF08951.10 NODE_60677_length_271_cov_2.487288_g52737_i0forward_frame_2 - 0.0054 17.1 0.8 0.007 16.7 0.8 1.2 1 0 0 1 1 1 1 Enterocin A Immunity DUF1241 PF06840.11 NODE_60677_length_271_cov_2.487288_g52737_i0forward_frame_2 - 0.067 12.8 0.1 0.07 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) Filaggrin PF03516.13 NODE_60676_length_271_cov_2.525424_g52736_i0forward_frame_2 - 3.5 8.4 15.3 4.2 8.2 0.3 2.2 2 0 0 2 2 2 0 Filaggrin DUF2427 PF10348.9 NODE_60674_length_271_cov_2.639831_g52734_i0forward_frame_2 - 0.06 13.1 0.9 0.093 12.5 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2427) NAS PF03059.16 NODE_60673_length_271_cov_2.711864_g52733_i0forward_frame_3 - 0.2 10.9 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Nicotianamine synthase protein DUF1860 PF08949.10 NODE_60671_length_271_cov_2.817797_g52731_i0forward_frame_3 - 0.12 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1860) Spem1 PF15670.5 NODE_60671_length_271_cov_2.817797_g52731_i0forward_frame_3 - 0.42 10.1 4.5 0.42 10.1 4.5 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 RuvA_N PF01330.21 NODE_60669_length_271_cov_2.978814_g52729_i0forward_frame_2 - 2.5e-20 72.3 0.1 3.4e-20 71.9 0.1 1.2 1 0 0 1 1 1 1 RuvA N terminal domain Pkinase PF00069.25 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 2.6e-32 112.3 0.2 2.9e-32 112.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 2e-21 76.5 0.0 2.1e-21 76.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.00028 19.8 0.0 0.00031 19.6 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.0027 17.1 0.1 0.0031 16.9 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.003 16.9 0.0 0.0067 15.8 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Pox_ser-thr_kin PF05445.11 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.017 14.1 0.1 0.018 14.0 0.1 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase YrbL-PhoP_reg PF10707.9 NODE_60667_length_271_cov_3.173729_g52727_i0forward_frame_3 - 0.07 12.7 0.0 0.079 12.5 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL OapA PF04225.12 NODE_60665_length_271_cov_3.733051_g52725_i0forward_frame_2 - 1.9e-28 98.4 0.0 2.2e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 Opacity-associated protein A LysM-like domain IgaA PF07095.11 NODE_60665_length_271_cov_3.733051_g52725_i0forward_frame_2 - 0.11 10.5 0.0 0.11 10.5 0.0 1.0 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA DUF4765 PF15962.5 NODE_60665_length_271_cov_3.733051_g52725_i0forward_frame_2 - 0.16 9.9 0.0 0.18 9.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4765) BAF1_ABF1 PF04684.13 NODE_60662_length_271_cov_5.190678_g52722_i0forward_frame_2 - 0.23 10.5 3.8 0.28 10.2 3.8 1.0 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor DUF669 PF05037.13 NODE_60661_length_271_cov_5.466102_g52721_i0reverse_frame_2 - 0.036 14.2 0.0 0.041 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF669) DUF656 PF04920.12 NODE_60657_length_271_cov_34.868644_g52717_i0forward_frame_2 - 0.11 12.4 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF656) zf-RRN7 PF11781.8 NODE_60657_length_271_cov_34.868644_g52717_i0forward_frame_2 - 0.15 11.7 2.8 0.38 10.5 2.0 2.0 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF3197 PF11432.8 NODE_60656_length_271_cov_38.288136_g52716_i0reverse_frame_3 - 0.12 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3197) IL6Ra-bind PF09240.10 NODE_60656_length_271_cov_38.288136_g52716_i0forward_frame_3 - 0.0074 16.7 0.2 0.0091 16.4 0.2 1.1 1 0 0 1 1 1 1 Interleukin-6 receptor alpha chain, binding Rogdi_lz PF10259.9 NODE_60654_length_271_cov_42.673729_g52714_i0forward_frame_3 - 0.035 13.6 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 Rogdi leucine zipper containing protein DUF1180 PF06679.12 NODE_60652_length_271_cov_49.275424_g52712_i0reverse_frame_3 - 0.033 14.6 0.1 0.036 14.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Holin_SPP1 PF04688.13 NODE_60650_length_271_cov_49.597458_g52710_i0reverse_frame_3 - 0.035 14.3 0.1 0.061 13.5 0.1 1.4 1 0 0 1 1 1 0 SPP1 phage holin CLIP_SPH_mas PF18398.1 NODE_60645_length_271_cov_55.953390_g52705_i0reverse_frame_2 - 0.0077 16.6 0.9 1.1 9.7 0.1 2.4 2 0 0 2 2 2 2 Clip-domain serine protease homolog masquerade ORF11CD3 PF10549.9 NODE_60644_length_271_cov_56.665254_g52704_i0reverse_frame_2 - 0.2 11.8 0.6 0.3 11.2 0.2 1.5 2 0 0 2 2 2 0 ORF11CD3 domain DUF4328 PF14219.6 NODE_60640_length_271_cov_59.902542_g52700_i0reverse_frame_3 - 0.038 13.6 0.0 0.044 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4328) PRA-CH PF01502.18 NODE_60639_length_271_cov_60.406780_g52699_i0reverse_frame_3 - 0.016 15.0 0.5 0.021 14.6 0.5 1.2 1 0 0 1 1 1 0 Phosphoribosyl-AMP cyclohydrolase Neurokinin_B PF03823.14 NODE_60639_length_271_cov_60.406780_g52699_i0reverse_frame_2 - 0.14 12.2 0.1 0.21 11.7 0.1 1.3 1 0 0 1 1 1 0 Neurokinin B DUF1856 PF08983.10 NODE_60639_length_271_cov_60.406780_g52699_i0forward_frame_2 - 0.3 11.3 6.4 0.39 11.0 4.6 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF1856) Tna_leader PF08053.11 NODE_60637_length_271_cov_62.046610_g52697_i0forward_frame_3 - 0.12 12.4 0.9 0.3 11.1 0.9 1.7 1 0 0 1 1 1 0 Tryptophanase operon leader peptide SRP40_C PF05022.12 NODE_60636_length_271_cov_63.177966_g52696_i0forward_frame_2 - 7e-14 52.4 7.3 7e-14 52.4 7.3 1.9 2 0 0 2 2 2 1 SRP40, C-terminal domain Alpha_E1_glycop PF01589.16 NODE_60631_length_271_cov_73.254237_g52691_i0forward_frame_3 - 3.3 6.2 6.1 0.51 8.9 2.2 1.6 2 0 0 2 2 2 0 Alphavirus E1 glycoprotein MYO10_CC PF16735.5 NODE_60630_length_271_cov_77.152542_g52690_i0reverse_frame_2 - 0.003 17.6 0.6 0.0067 16.5 0.2 1.7 2 0 0 2 2 2 1 Unconventional myosin-X coiled coil domain MFS_2 PF13347.6 NODE_60630_length_271_cov_77.152542_g52690_i0reverse_frame_2 - 0.048 12.2 0.2 0.056 12.0 0.2 1.0 1 0 0 1 1 1 0 MFS/sugar transport protein EVC2_like PF12297.8 NODE_60630_length_271_cov_77.152542_g52690_i0forward_frame_3 - 0.1 11.3 0.5 0.1 11.3 0.5 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Sirohm_synth_C PF14823.6 NODE_60627_length_271_cov_84.936441_g52687_i0forward_frame_3 - 0.051 13.2 0.0 0.069 12.8 0.0 1.3 1 0 0 1 1 1 0 Sirohaem biosynthesis protein C-terminal PDGF_N PF04692.13 NODE_60624_length_271_cov_94.847458_g52684_i0reverse_frame_2 - 0.091 13.6 0.0 0.13 13.1 0.0 1.2 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region Phage_tail_NK PF16532.5 NODE_60622_length_271_cov_104.283898_g52682_i0forward_frame_2 - 0.0084 15.8 0.0 0.011 15.4 0.0 1.1 1 0 0 1 1 1 1 Sf6-type phage tail needle knob or tip of some Caudovirales DUF3938 PF13074.6 NODE_60619_length_271_cov_122.889831_g52679_i0reverse_frame_3 - 0.042 14.1 0.4 0.054 13.7 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3938) DsrD PF08679.11 NODE_60619_length_271_cov_122.889831_g52679_i0forward_frame_2 - 0.016 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) SCO1-SenC PF02630.14 NODE_60618_length_271_cov_124.889831_g52678_i0reverse_frame_3 - 0.065 13.1 0.6 0.41 10.6 0.0 1.9 2 0 0 2 2 2 0 SCO1/SenC WBP-1 PF11669.8 NODE_60617_length_271_cov_128.063559_g52677_i0reverse_frame_2 - 0.0099 16.5 1.4 0.012 16.2 1.4 1.3 1 0 0 1 1 1 1 WW domain-binding protein 1 ROS_MUCR PF05443.11 NODE_60617_length_271_cov_128.063559_g52677_i0reverse_frame_2 - 0.067 13.2 0.3 0.1 12.6 0.3 1.2 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein ECSIT_C PF14784.6 NODE_60614_length_271_cov_159.211864_g52674_i0forward_frame_3 - 0.17 12.3 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 C-terminal domain of the ECSIT protein FecCD PF01032.18 NODE_60611_length_271_cov_217.419492_g52671_i0reverse_frame_3 - 0.003 16.6 0.2 0.003 16.6 0.2 1.1 1 0 0 1 1 1 1 FecCD transport family TMEM117 PF15113.6 NODE_60611_length_271_cov_217.419492_g52671_i0reverse_frame_3 - 0.053 12.5 7.9 0.055 12.4 7.9 1.0 1 0 0 1 1 1 0 TMEM117 protein family RAMP4 PF06624.12 NODE_60609_length_271_cov_311.177966_g52669_i0forward_frame_3 - 0.066 13.3 0.2 0.092 12.8 0.2 1.2 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 DUF3343 PF11823.8 NODE_60608_length_271_cov_332.843220_g52668_i0reverse_frame_3 - 0.072 12.6 0.1 0.095 12.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3343) Regulator_TrmB PF11495.8 NODE_60608_length_271_cov_332.843220_g52668_i0reverse_frame_2 - 0.08 12.1 0.1 0.098 11.8 0.1 1.0 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB TAF8_C PF10406.9 NODE_60608_length_271_cov_332.843220_g52668_i0forward_frame_3 - 0.17 12.5 0.0 0.27 11.8 0.0 1.3 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term zf_ZIC PF18366.1 NODE_60608_length_271_cov_332.843220_g52668_i0forward_frame_2 - 0.07 13.3 0.0 0.18 12.0 0.0 1.7 1 0 0 1 1 1 0 Zic proteins zinc finger domain Leg1 PF05612.12 NODE_60604_length_271_cov_1407.004237_g52664_i0forward_frame_2 - 0.067 12.3 1.0 0.078 12.1 1.0 1.0 1 0 0 1 1 1 0 Leg1 Defensin_beta_2 PF13841.6 NODE_60604_length_271_cov_1407.004237_g52664_i0forward_frame_2 - 2.9 8.5 13.0 3.6 8.1 1.6 2.7 3 0 0 3 3 3 0 Beta defensin HMG_box PF00505.19 NODE_60603_length_271_cov_1575.084746_g52663_i0forward_frame_3 - 0.00011 22.6 0.7 0.00016 22.0 0.0 1.6 2 0 0 2 2 2 1 HMG (high mobility group) box DUF4020 PF13212.6 NODE_60598_length_272_cov_1.151899_g52658_i0reverse_frame_2 - 0.11 12.3 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4020) DUF1922 PF09082.10 NODE_60597_length_272_cov_1.164557_g52657_i0reverse_frame_3 - 0.16 12.3 0.1 8.5 6.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1922) DUF4598 PF15370.6 NODE_60595_length_272_cov_1.206751_g52655_i0reverse_frame_2 - 0.03 14.8 2.0 0.036 14.5 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4598) EbsA PF17255.2 NODE_60594_length_272_cov_1.265823_g52654_i0forward_frame_3 - 0.15 12.4 4.3 0.19 12.1 4.3 1.1 1 0 0 1 1 1 0 EbsA-like protein DUF2207 PF09972.9 NODE_60594_length_272_cov_1.265823_g52654_i0forward_frame_3 - 0.93 8.2 2.6 1.1 8.0 2.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2258 PF10015.9 NODE_60592_length_272_cov_1.270042_g52652_i0reverse_frame_3 - 0.057 13.5 0.6 0.41 10.8 0.3 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) DUF3978 PF13123.6 NODE_60592_length_272_cov_1.270042_g52652_i0reverse_frame_2 - 0.037 13.8 1.4 0.045 13.5 1.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3978) PIG-P PF08510.12 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_3 - 0.063 13.2 1.3 0.063 13.2 1.3 2.0 2 0 0 2 2 2 0 PIG-P DUF2973 PF11189.8 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_3 - 1.2 9.3 3.6 0.76 9.9 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2973) DUF2207 PF09972.9 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_3 - 4 6.1 5.2 4.5 5.9 5.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Sigma_reg_N PF13800.6 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_3 - 4.1 7.8 7.5 4.8 7.6 0.5 2.1 2 0 0 2 2 2 0 Sigma factor regulator N-terminal PADR1 PF08063.12 NODE_60592_length_272_cov_1.270042_g52652_i0forward_frame_2 - 0.14 11.9 5.9 0.25 11.2 5.9 1.4 1 0 0 1 1 1 0 PADR1 (NUC008) domain TRP PF06011.12 NODE_60588_length_272_cov_1.358650_g52648_i0reverse_frame_3 - 0.0043 15.8 13.3 0.0048 15.7 13.3 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF2721 PF11026.8 NODE_60588_length_272_cov_1.358650_g52648_i0reverse_frame_3 - 5 7.0 8.2 3.6 7.5 5.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) Glyco_tranf_2_2 PF10111.9 NODE_60588_length_272_cov_1.358650_g52648_i0forward_frame_2 - 0.083 12.4 0.4 0.092 12.2 0.4 1.0 1 0 0 1 1 1 0 Glycosyltransferase like family 2 AvrLm4-7 PF18661.1 NODE_60587_length_272_cov_1.396624_g52647_i0reverse_frame_3 - 0.03 15.4 0.4 1.7 9.7 0.2 2.0 1 1 1 2 2 2 0 Avirulence Effector AvrLm4-7 LRRNT PF01462.18 NODE_60587_length_272_cov_1.396624_g52647_i0reverse_frame_2 - 0.72 9.6 6.6 0.59 9.8 1.0 2.4 2 0 0 2 2 2 0 Leucine rich repeat N-terminal domain RHIM PF12721.7 NODE_60582_length_272_cov_1.472574_g52642_i0reverse_frame_3 - 0.39 11.2 5.4 1.9 9.0 5.4 2.0 1 1 0 1 1 1 0 RIP homotypic interaction motif PFL-like PF02901.15 NODE_60579_length_272_cov_1.518987_g52639_i0forward_frame_2 - 0.052 12.2 0.0 0.052 12.2 0.0 1.1 1 0 0 1 1 1 0 Pyruvate formate lyase-like Pox_A32 PF04665.12 NODE_60578_length_272_cov_1.523207_g52638_i0reverse_frame_3 - 0.7 9.3 4.7 0.83 9.1 4.3 1.3 1 1 0 1 1 1 0 Poxvirus A32 protein Retrotran_gag_2 PF14223.6 NODE_60578_length_272_cov_1.523207_g52638_i0reverse_frame_2 - 0.066 12.9 0.1 0.072 12.8 0.1 1.2 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type CRISPR_Cas9_WED PF18061.1 NODE_60578_length_272_cov_1.523207_g52638_i0reverse_frame_2 - 0.18 11.9 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 CRISPR-Cas9 WED domain WND PF07861.11 NODE_60576_length_272_cov_1.594937_g52636_i0reverse_frame_3 - 0.0069 15.8 0.1 0.0077 15.7 0.1 1.1 1 0 0 1 1 1 1 WisP family N-Terminal Region DUF4046 PF13255.6 NODE_60576_length_272_cov_1.594937_g52636_i0forward_frame_3 - 0.18 12.4 3.3 0.27 11.8 2.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4046) DUF4574 PF15141.6 NODE_60572_length_272_cov_1.607595_g52632_i0reverse_frame_3 - 0.091 12.7 5.1 0.13 12.2 5.1 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 DUF4348 PF14254.6 NODE_60571_length_272_cov_1.637131_g52631_i0reverse_frame_2 - 0.029 13.8 1.6 0.04 13.3 0.7 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4348) Lact-deh-memb PF09330.11 NODE_60569_length_272_cov_1.645570_g52629_i0forward_frame_3 - 0.013 14.9 0.1 0.016 14.5 0.1 1.1 1 0 0 1 1 1 0 D-lactate dehydrogenase, membrane binding Rubredoxin PF00301.20 NODE_60566_length_272_cov_1.683544_g52626_i0forward_frame_3 - 0.046 13.8 0.3 0.13 12.3 0.3 1.8 1 0 0 1 1 1 0 Rubredoxin RB_A PF01858.17 NODE_60563_length_272_cov_1.738397_g52623_i0reverse_frame_2 - 0.029 14.2 1.0 0.044 13.6 1.0 1.2 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain DUF1542 PF07564.11 NODE_60560_length_272_cov_1.805907_g52620_i0reverse_frame_2 - 0.013 15.6 0.9 0.018 15.1 0.9 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1542) DDE_Tnp_IS1 PF03400.13 NODE_60560_length_272_cov_1.805907_g52620_i0reverse_frame_2 - 0.071 13.5 0.7 0.078 13.3 0.7 1.2 1 0 0 1 1 1 0 IS1 transposase Myco_arth_vir_N PF09610.10 NODE_60560_length_272_cov_1.805907_g52620_i0forward_frame_3 - 0.15 12.2 1.2 0.23 11.6 1.2 1.3 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) AAA_lid_7 PF17867.1 NODE_60559_length_272_cov_1.827004_g52619_i0reverse_frame_3 - 0.0045 17.2 0.0 0.0056 16.9 0.0 1.1 1 0 0 1 1 1 1 Midasin AAA lid domain WXG100 PF06013.12 NODE_60559_length_272_cov_1.827004_g52619_i0reverse_frame_3 - 0.01 16.0 0.2 0.013 15.7 0.2 1.1 1 0 0 1 1 1 0 Proteins of 100 residues with WXG DUF2120 PF09893.9 NODE_60559_length_272_cov_1.827004_g52619_i0reverse_frame_3 - 0.045 13.8 1.0 0.95 9.6 0.2 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) Thermopsin PF05317.11 NODE_60558_length_272_cov_1.843882_g52618_i0forward_frame_2 - 0.0047 16.4 0.4 0.0051 16.3 0.4 1.0 1 0 0 1 1 1 1 Thermopsin Nucleos_tra2_C PF07662.13 NODE_60556_length_272_cov_1.877637_g52616_i0forward_frame_2 - 6.2e-08 32.7 0.1 6.2e-08 32.7 0.1 1.4 2 0 0 2 2 2 1 Na+ dependent nucleoside transporter C-terminus Ribosomal_L31 PF01197.18 NODE_60554_length_272_cov_1.940928_g52614_i0forward_frame_2 - 0.064 13.5 0.1 0.094 13.0 0.1 1.4 1 1 0 1 1 1 0 Ribosomal protein L31 vMSA PF00695.19 NODE_60553_length_272_cov_1.940928_g52613_i0forward_frame_3 - 0.031 13.4 2.3 0.037 13.2 2.3 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Ion_trans PF00520.31 NODE_60551_length_272_cov_1.970464_g52611_i0reverse_frame_3 - 0.14 11.4 0.1 0.15 11.3 0.1 1.1 1 0 0 1 1 1 0 Ion transport protein Opy2 PF09463.10 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 0.021 15.1 23.2 0.64 10.4 4.0 3.8 3 1 1 4 4 4 0 Opy2 protein Ephrin_rec_like PF07699.13 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 0.038 13.8 23.8 1.9 8.3 11.9 3.9 1 1 2 3 3 3 0 Putative ephrin-receptor like Dickkopf_N PF04706.12 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 0.18 12.3 15.5 12 6.5 1.8 4.0 1 1 2 3 3 3 0 Dickkopf N-terminal cysteine-rich region zf-MYND PF01753.18 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 0.83 9.8 20.3 1.1 9.3 4.3 3.3 2 2 0 2 2 2 0 MYND finger Lustrin_cystein PF14625.6 NODE_60549_length_272_cov_1.991561_g52609_i0forward_frame_3 - 1.5 9.2 27.7 0.22 11.9 1.6 4.6 1 1 4 5 5 5 0 Lustrin, cysteine-rich repeated domain Thioredoxin PF00085.20 NODE_60547_length_272_cov_2.075949_g52607_i0reverse_frame_3 - 0.074 13.0 1.5 0.088 12.8 1.5 1.2 1 0 0 1 1 1 0 Thioredoxin CD20 PF04103.15 NODE_60546_length_272_cov_2.113924_g52606_i0reverse_frame_2 - 0.031 14.4 1.9 0.034 14.2 1.9 1.1 1 0 0 1 1 1 0 CD20-like family Nif11 PF07862.11 NODE_60546_length_272_cov_2.113924_g52606_i0reverse_frame_2 - 0.15 12.4 0.1 0.24 11.7 0.1 1.3 1 0 0 1 1 1 0 Nif11 domain DUF308 PF03729.13 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 1.8e-12 47.4 15.3 2.1e-12 47.2 15.3 1.1 1 0 0 1 1 1 1 Short repeat of unknown function (DUF308) DUF4386 PF14329.6 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.0062 16.4 5.3 0.0075 16.2 5.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4386) Tmemb_170 PF10190.9 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.015 15.7 3.6 1 9.8 0.5 2.1 1 1 1 2 2 2 0 Putative transmembrane protein 170 DUF3792 PF12670.7 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.029 14.5 7.6 0.035 14.3 7.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) SirB PF04247.12 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.1 12.7 5.2 0.38 10.9 4.8 1.8 1 1 1 2 2 2 0 Invasion gene expression up-regulator, SirB DUF3040 PF11239.8 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.1 12.9 7.3 4.9 7.5 7.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3040) Oxidored_q2 PF00420.24 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.17 11.5 6.0 0.22 11.2 6.0 1.3 1 1 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YfhO PF09586.10 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.18 10.0 3.0 0.21 9.8 3.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Peptidase_M48_N PF16491.5 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.27 11.1 3.3 0.16 11.9 1.4 1.5 1 1 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices LptF_LptG PF03739.14 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.65 8.8 7.4 0.75 8.6 7.4 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG TMEM100 PF16311.5 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 0.93 9.1 2.9 1.3 8.6 2.9 1.2 1 0 0 1 1 1 0 Transmembrane protein 100 DUF3784 PF12650.7 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 2.1 8.6 11.5 0.33 11.2 3.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3784) DUF3810 PF12725.7 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 3.2 7.0 6.2 3.7 6.8 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) COPI_assoc PF08507.10 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 3.2 7.8 13.6 4.3 7.4 2.0 2.4 1 1 1 2 2 2 0 COPI associated protein Phage_holin_3_6 PF07332.11 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 7.4 6.6 11.1 61 3.7 11.1 1.9 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Phage_holin_2_3 PF16080.5 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 7.8 6.4 6.4 0.77 9.6 2.1 1.7 2 0 0 2 2 2 0 Bacteriophage holin family HP1 DUF4131 PF13567.6 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 8.8 6.0 11.6 1e+02 2.5 0.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) DUF2721 PF11026.8 NODE_60544_length_272_cov_2.118143_g52604_i0forward_frame_2 - 9.8 6.1 11.8 7.4 6.5 4.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2721) DUF1564 PF07600.11 NODE_60543_length_272_cov_2.126582_g52603_i0forward_frame_3 - 0.021 14.5 0.5 0.024 14.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) LEA_6 PF10714.9 NODE_60543_length_272_cov_2.126582_g52603_i0forward_frame_2 - 0.044 13.8 0.2 0.06 13.4 0.2 1.2 1 0 0 1 1 1 0 Late embryogenesis abundant protein 18 Rdx PF10262.9 NODE_60536_length_272_cov_2.274262_g52596_i0forward_frame_3 - 0.053 13.7 0.4 0.063 13.5 0.4 1.3 1 1 0 1 1 1 0 Rdx family DUF1072 PF06380.11 NODE_60532_length_272_cov_2.738397_g52592_i0forward_frame_3 - 0.15 11.9 0.2 0.15 11.9 0.2 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1072) Hist_deacetyl PF00850.19 NODE_60529_length_272_cov_2.898734_g52589_i0forward_frame_3 - 9.2e-25 87.7 0.1 9.7e-25 87.7 0.1 1.0 1 0 0 1 1 1 1 Histone deacetylase domain PLDc_2 PF13091.6 NODE_60527_length_272_cov_3.160338_g52587_i0forward_frame_2 - 0.021 14.7 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 PLD-like domain TK PF00265.18 NODE_60525_length_272_cov_3.392405_g52585_i0forward_frame_2 - 6.9e-20 71.6 0.0 8e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 Thymidine kinase Not3 PF04065.15 NODE_60519_length_272_cov_4.383966_g52579_i0reverse_frame_3 - 0.015 14.7 1.3 0.016 14.6 1.3 1.1 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component Alfin PF12165.8 NODE_60519_length_272_cov_4.383966_g52579_i0reverse_frame_3 - 0.052 13.2 0.0 0.054 13.1 0.0 1.1 1 0 0 1 1 1 0 Alfin Toxin_4 PF00706.17 NODE_60518_length_272_cov_4.413502_g52578_i0reverse_frame_2 - 0.091 13.2 0.1 1.2 9.6 0.0 2.1 2 0 0 2 2 2 0 Anenome neurotoxin ET PF01684.16 NODE_60516_length_272_cov_9.637131_g52576_i0forward_frame_3 - 0.075 13.4 1.1 0.11 12.8 1.1 1.3 1 0 0 1 1 1 0 ET module FAM209 PF15206.6 NODE_60514_length_272_cov_27.008439_g52574_i0forward_frame_2 - 0.012 15.4 8.6 0.015 15.1 8.6 1.1 1 0 0 1 1 1 0 FAM209 family DUF4770 PF15994.5 NODE_60513_length_272_cov_30.561181_g52573_i0forward_frame_2 - 0.012 15.8 5.8 0.015 15.6 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) Zip PF02535.22 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 3.4 6.8 5.9 4 6.5 5.9 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Connexin PF00029.19 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 3.6 7.3 8.0 4.2 7.1 8.0 1.1 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 5.7 5.6 5.6 6 5.5 5.6 1.0 1 0 0 1 1 1 0 Presenilin PPL5 PF18168.1 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 6.2 6.0 8.8 7.3 5.8 8.8 1.0 1 0 0 1 1 1 0 Prim-pol family 5 Sec62 PF03839.16 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 7 6.1 10.3 7.5 6.0 10.3 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 RR_TM4-6 PF06459.12 NODE_60512_length_272_cov_33.320675_g52572_i0forward_frame_3 - 7.6 6.3 13.5 8.2 6.2 13.5 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 ANAPC_CDC26 PF10471.9 NODE_60510_length_272_cov_40.257384_g52570_i0reverse_frame_3 - 0.83 10.5 4.1 1.4 9.8 4.1 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex APC subunit CDC26 NapE PF06796.11 NODE_60508_length_272_cov_41.367089_g52568_i0forward_frame_3 - 0.26 10.8 0.0 0.26 10.8 0.0 1.7 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE Calpain_inhib PF00748.19 NODE_60505_length_272_cov_43.928270_g52565_i0reverse_frame_3 - 0.085 13.4 2.5 0.11 13.1 2.5 1.1 1 0 0 1 1 1 0 Calpain inhibitor Rpr2 PF04032.16 NODE_60502_length_272_cov_46.755274_g52562_i0forward_frame_2 - 8.2e-08 32.4 3.3 8.2e-08 32.4 3.3 1.5 2 0 0 2 2 2 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain MqsA_antitoxin PF15731.5 NODE_60502_length_272_cov_46.755274_g52562_i0forward_frame_2 - 0.0073 16.4 0.3 0.0081 16.3 0.3 1.1 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA RNA_POL_M_15KD PF02150.16 NODE_60502_length_272_cov_46.755274_g52562_i0forward_frame_2 - 0.0096 15.8 2.5 0.034 14.0 0.3 2.2 2 0 0 2 2 2 1 RNA polymerases M/15 Kd subunit DZR PF12773.7 NODE_60502_length_272_cov_46.755274_g52562_i0forward_frame_2 - 0.05 13.6 3.1 0.11 12.6 3.1 1.6 1 1 0 1 1 1 0 Double zinc ribbon zf-C2H2_3 PF13878.6 NODE_60502_length_272_cov_46.755274_g52562_i0forward_frame_2 - 0.23 11.3 2.5 1.3 8.9 0.1 2.4 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO Ogr_Delta PF04606.12 NODE_60502_length_272_cov_46.755274_g52562_i0forward_frame_2 - 0.73 9.9 6.0 24 5.0 6.0 2.2 1 1 0 1 1 1 0 Ogr/Delta-like zinc finger pP_pnuc_2 PF18166.1 NODE_60501_length_272_cov_48.936709_g52561_i0reverse_frame_2 - 0.026 14.6 0.4 0.03 14.4 0.4 1.3 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease ANAPC8 PF04049.13 NODE_60501_length_272_cov_48.936709_g52561_i0reverse_frame_2 - 0.043 13.9 0.4 0.048 13.7 0.4 1.1 1 0 0 1 1 1 0 Anaphase promoting complex subunit 8 / Cdc23 SCRG1 PF15224.6 NODE_60498_length_272_cov_50.928270_g52558_i0forward_frame_3 - 0.062 13.4 5.4 0.084 13.0 5.4 1.2 1 0 0 1 1 1 0 Scrapie-responsive protein 1 OS-D PF03392.13 NODE_60497_length_272_cov_52.565401_g52557_i0forward_frame_3 - 0.073 13.2 0.2 0.091 12.9 0.2 1.1 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D Glyco_tran_WbsX PF14307.6 NODE_60497_length_272_cov_52.565401_g52557_i0forward_frame_2 - 0.069 12.6 0.0 0.079 12.4 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase WbsX O-ag_pol_Wzy PF14296.6 NODE_60495_length_272_cov_53.945148_g52555_i0forward_frame_2 - 0.0038 15.9 0.1 0.0042 15.8 0.1 1.1 1 0 0 1 1 1 1 O-antigen polysaccharide polymerase Wzy Glyco_hydro_4 PF02056.16 NODE_60494_length_272_cov_54.198312_g52554_i0reverse_frame_2 - 0.15 11.6 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase MORN PF02493.20 NODE_60493_length_272_cov_59.426160_g52553_i0reverse_frame_2 - 3.1e-05 23.6 0.6 0.0033 17.2 0.1 2.4 2 0 0 2 2 2 2 MORN repeat 2-ph_phosp PF04029.14 NODE_60493_length_272_cov_59.426160_g52553_i0reverse_frame_2 - 0.12 11.5 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 2-phosphosulpholactate phosphatase NDUF_B6 PF09782.9 NODE_60493_length_272_cov_59.426160_g52553_i0forward_frame_2 - 0.2 11.8 0.2 0.26 11.4 0.2 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit DUF4607 PF15380.6 NODE_60492_length_272_cov_59.472574_g52552_i0reverse_frame_3 - 0.13 11.8 0.2 0.18 11.2 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4607) NS3_envE PF02723.14 NODE_60492_length_272_cov_59.472574_g52552_i0reverse_frame_2 - 0.081 13.0 0.2 0.11 12.6 0.2 1.3 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E HNH_4 PF13395.6 NODE_60490_length_272_cov_59.915612_g52550_i0reverse_frame_2 - 0.075 13.0 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 HNH endonuclease ATG16 PF08614.11 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.0005 20.4 17.9 0.00056 20.2 17.9 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) SpecificRecomb PF10136.9 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.16 10.2 4.7 0.19 10.0 4.7 1.0 1 0 0 1 1 1 0 Site-specific recombinase TSC22 PF01166.18 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.18 12.1 6.4 0.89 9.9 1.4 2.1 1 1 1 2 2 2 0 TSC-22/dip/bun family DivIC PF04977.15 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.23 11.2 15.4 0.28 11.0 0.7 2.1 1 1 1 2 2 2 0 Septum formation initiator Spc29 PF17082.5 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.67 9.8 7.9 0.059 13.2 1.6 1.7 1 1 1 2 2 2 0 Spindle Pole Component 29 TMF_TATA_bd PF12325.8 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 0.7 10.1 15.3 1.1 9.5 15.3 1.4 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DUF2203 PF09969.9 NODE_60489_length_272_cov_60.004219_g52549_i0forward_frame_2 - 2.7 8.7 8.8 3.4 8.4 8.8 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) CLN6 PF15156.6 NODE_60488_length_272_cov_62.611814_g52548_i0reverse_frame_3 - 0.28 10.4 0.0 0.33 10.2 0.0 1.1 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 6 LCE PF14672.6 NODE_60487_length_272_cov_63.987342_g52547_i0reverse_frame_3 - 2.6 8.7 11.3 4.3 8.0 10.6 1.7 1 1 1 2 2 2 0 Late cornified envelope CRM1_repeat_2 PF18784.1 NODE_60484_length_272_cov_71.388186_g52544_i0reverse_frame_3 - 0.0019 17.8 0.0 0.003 17.2 0.0 1.3 1 0 0 1 1 1 1 CRM1 / Exportin repeat 2 CompInhib_SCIN PF11546.8 NODE_60484_length_272_cov_71.388186_g52544_i0reverse_frame_3 - 0.006 16.6 0.1 0.007 16.4 0.1 1.1 1 0 0 1 1 1 1 Staphylococcal complement inhibitor SCIN DUF4600 PF15372.6 NODE_60484_length_272_cov_71.388186_g52544_i0reverse_frame_3 - 0.043 14.2 0.1 0.048 14.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4600) Kazal_3 PF18434.1 NODE_60480_length_272_cov_79.164557_g52540_i0reverse_frame_2 - 0.035 13.8 0.1 0.065 13.0 0.1 1.4 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain Thioredoxin PF00085.20 NODE_60477_length_272_cov_88.662447_g52537_i0reverse_frame_3 - 0.0028 17.6 0.0 0.0034 17.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin FNIP PF05725.12 NODE_60476_length_272_cov_89.746835_g52536_i0reverse_frame_2 - 7e-09 35.7 0.7 1.2e-08 34.9 0.7 1.4 1 1 0 1 1 1 1 FNIP Repeat Gpr1_Fun34_YaaH PF01184.19 NODE_60475_length_272_cov_93.476793_g52535_i0reverse_frame_3 - 0.2 11.2 4.3 0.23 11.1 4.3 1.2 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family DUF5355 PF17306.2 NODE_60475_length_272_cov_93.476793_g52535_i0forward_frame_2 - 0.044 12.8 4.3 0.046 12.8 4.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5355) TMEM174 PF15029.6 NODE_60475_length_272_cov_93.476793_g52535_i0forward_frame_2 - 0.16 11.7 0.3 0.17 11.6 0.3 1.0 1 0 0 1 1 1 0 Transmembrane protein 174 OAD_gamma PF04277.13 NODE_60475_length_272_cov_93.476793_g52535_i0forward_frame_2 - 0.2 12.3 1.4 0.26 11.9 1.4 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Rep_1 PF01446.17 NODE_60472_length_272_cov_102.569620_g52532_i0reverse_frame_2 - 0.03 13.8 3.1 0.034 13.6 3.1 1.1 1 0 0 1 1 1 0 Replication protein Pyridox_oxase_2 PF12766.7 NODE_60471_length_272_cov_103.367089_g52531_i0reverse_frame_2 - 0.11 13.1 0.0 0.13 12.9 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF3606 PF12244.8 NODE_60469_length_272_cov_113.784810_g52529_i0forward_frame_2 - 0.081 12.9 0.2 0.14 12.1 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3606) SF3A3 PF16837.5 NODE_60468_length_272_cov_115.894515_g52528_i0reverse_frame_2 - 0.028 14.9 5.7 0.062 13.8 5.7 1.5 1 1 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 gerPA PF10676.9 NODE_60463_length_272_cov_142.679325_g52523_i0reverse_frame_2 - 0.12 12.6 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Spore germination protein gerPA/gerPF SLED PF12140.8 NODE_60463_length_272_cov_142.679325_g52523_i0forward_frame_3 - 0.072 13.6 0.0 0.14 12.7 0.0 1.5 1 1 0 1 1 1 0 SLED domain Claudin_3 PF06653.11 NODE_60461_length_272_cov_173.898734_g52521_i0forward_frame_3 - 4.6 7.2 9.9 4.9 7.1 0.9 2.0 1 1 1 2 2 2 0 Tight junction protein, Claudin-like Calpain_III PF01067.22 NODE_60460_length_272_cov_186.202532_g52520_i0reverse_frame_2 - 0.0067 16.7 0.1 0.015 15.6 0.0 1.6 2 0 0 2 2 2 1 Calpain large subunit, domain III Queuosine_synth PF02547.15 NODE_60459_length_272_cov_237.506329_g52519_i0reverse_frame_3 - 0.0074 15.4 0.2 0.0091 15.2 0.2 1.2 1 0 0 1 1 1 1 Queuosine biosynthesis protein FANCA_interact PF15751.5 NODE_60457_length_272_cov_421.489451_g52517_i0reverse_frame_3 - 0.02 15.4 0.4 0.056 13.9 0.3 1.7 1 1 1 2 2 2 0 FAAP20 FANCA interaction domain Ephrin_rec_like PF07699.13 NODE_60457_length_272_cov_421.489451_g52517_i0reverse_frame_2 - 0.0069 16.1 1.7 0.01 15.6 1.7 1.3 1 0 0 1 1 1 1 Putative ephrin-receptor like CLAMP PF14769.6 NODE_60457_length_272_cov_421.489451_g52517_i0reverse_frame_2 - 0.19 12.2 0.0 0.25 11.8 0.0 1.1 1 0 0 1 1 1 0 Flagellar C1a complex subunit C1a-32 Pkinase_C PF00433.24 NODE_60456_length_272_cov_577.320675_g52516_i0reverse_frame_3 - 2.8e-05 24.7 0.7 4.1e-05 24.2 0.7 1.4 1 0 0 1 1 1 1 Protein kinase C terminal domain Chloroa_b-bind PF00504.21 NODE_60454_length_272_cov_2240.303797_g52514_i0reverse_frame_3 - 1.9e-08 35.0 0.2 3.3e-08 34.2 0.2 1.6 1 1 0 1 1 1 1 Chlorophyll A-B binding protein AXE1 PF05448.12 NODE_60454_length_272_cov_2240.303797_g52514_i0forward_frame_2 - 0.11 11.1 0.1 0.14 10.8 0.1 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) OrfB_Zn_ribbon PF07282.11 NODE_60453_length_272_cov_2527.691983_g52513_i0forward_frame_2 - 0.31 11.0 4.4 0.44 10.5 3.6 1.7 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Cytidylate_kin2 PF13189.6 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 0.15 12.2 2.2 16 5.6 3.3 2.0 2 0 0 2 2 2 0 Cytidylate kinase-like family SLY PF12485.8 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 0.39 11.4 7.8 0.48 11.1 7.8 1.0 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein CDC45 PF02724.14 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 0.54 8.5 12.8 0.6 8.3 12.8 1.0 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 0.69 8.0 17.9 0.77 7.8 17.9 1.0 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 1.3 7.2 15.5 1.4 7.1 15.5 1.0 1 0 0 1 1 1 0 Nop14-like family Sporozoite_P67 PF05642.11 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 1.7 6.6 7.8 1.8 6.6 7.8 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Pox_RNA_Pol_19 PF05320.12 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 1.8 8.6 8.2 2.2 8.3 8.2 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit DUF4637 PF15470.6 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 1.9 8.2 11.2 2.1 8.1 11.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF2457 PF10446.9 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 7.4 5.6 18.2 8.4 5.4 18.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Pes-10 PF07149.11 NODE_60451_length_273_cov_0.882353_g52511_i0forward_frame_3 - 8.2 5.4 13.5 9 5.2 13.5 1.0 1 0 0 1 1 1 0 Pes-10 DUF842 PF05811.13 NODE_60450_length_273_cov_0.894958_g52510_i0reverse_frame_2 - 0.08 12.6 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) CHU_C PF13585.6 NODE_60450_length_273_cov_0.894958_g52510_i0forward_frame_2 - 0.053 13.6 0.1 0.082 13.0 0.1 1.2 1 0 0 1 1 1 0 C-terminal domain of CHU protein family DS PF01916.17 NODE_60449_length_273_cov_0.966387_g52509_i0reverse_frame_2 - 0.029 13.6 0.0 0.03 13.6 0.0 1.0 1 0 0 1 1 1 0 Deoxyhypusine synthase Ion_trans PF00520.31 NODE_60448_length_273_cov_1.004202_g52508_i0reverse_frame_2 - 5.6 6.1 14.8 37 3.4 13.4 2.0 1 1 1 2 2 2 0 Ion transport protein DUF2830 PF11125.8 NODE_60448_length_273_cov_1.004202_g52508_i0reverse_frame_2 - 6.7 6.8 7.8 12 6.0 1.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2830) eIF3_N PF09440.10 NODE_60448_length_273_cov_1.004202_g52508_i0forward_frame_2 - 0.069 13.6 0.1 0.077 13.4 0.1 1.1 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain PRY PF13765.6 NODE_60443_length_273_cov_1.105042_g52503_i0forward_frame_2 - 0.073 12.7 0.3 0.19 11.4 0.1 1.7 2 0 0 2 2 2 0 SPRY-associated domain DUF5380 PF17351.2 NODE_60437_length_273_cov_1.302521_g52497_i0reverse_frame_2 - 0.073 12.9 0.0 0.086 12.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5380) C2 PF00168.30 NODE_60436_length_273_cov_1.319328_g52496_i0forward_frame_3 - 0.0033 17.7 0.2 0.0037 17.5 0.2 1.2 1 0 0 1 1 1 1 C2 domain CEP76-C2 PF15627.6 NODE_60436_length_273_cov_1.319328_g52496_i0forward_frame_3 - 0.083 12.5 0.1 0.12 11.9 0.1 1.3 1 1 0 1 1 1 0 CEP76 C2 domain BTB_2 PF02214.22 NODE_60434_length_273_cov_1.336134_g52494_i0reverse_frame_3 - 0.056 13.8 0.5 0.067 13.5 0.5 1.1 1 0 0 1 1 1 0 BTB/POZ domain DUF3437 PF11919.8 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_3 - 0.042 13.8 0.1 0.051 13.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) UPF0242 PF06785.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 4.4e-05 23.7 6.6 5.4e-05 23.4 6.6 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus TMF_DNA_bd PF12329.8 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 4.8e-05 23.3 10.2 4.8e-05 23.3 10.2 1.4 1 1 0 1 1 1 1 TATA element modulatory factor 1 DNA binding SlyX PF04102.12 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00011 22.7 6.0 0.039 14.6 0.5 2.1 1 1 1 2 2 2 2 SlyX FlaC_arch PF05377.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00024 21.4 4.4 0.01 16.2 0.9 2.2 1 1 1 2 2 2 2 Flagella accessory protein C (FlaC) TACC_C PF05010.14 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00042 20.2 1.8 0.0005 19.9 1.8 1.0 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HemX PF04375.14 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00047 19.5 4.0 0.00056 19.3 4.0 1.0 1 0 0 1 1 1 1 HemX, putative uroporphyrinogen-III C-methyltransferase JIP_LZII PF16471.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.00087 19.4 4.4 0.15 12.3 0.7 2.2 1 1 1 2 2 2 2 JNK-interacting protein leucine zipper II HALZ PF02183.18 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0011 19.2 1.4 0.0017 18.6 0.2 1.9 2 0 0 2 2 1 1 Homeobox associated leucine zipper ATG16 PF08614.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0014 18.9 5.8 0.0019 18.5 5.8 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) HOOK PF05622.12 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0016 16.7 4.9 0.0018 16.6 4.9 1.0 1 0 0 1 1 1 1 HOOK protein KLRAQ PF10205.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0022 18.2 5.9 0.0052 17.0 5.1 1.7 1 1 0 1 1 1 1 Predicted coiled-coil domain-containing protein CENP-F_leu_zip PF10473.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0024 17.9 6.6 0.003 17.6 6.6 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ZapB PF06005.12 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0036 17.7 5.6 0.0075 16.7 5.5 1.6 1 1 0 1 1 1 1 Cell division protein ZapB TTKRSYEDQ PF10212.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0037 16.3 2.4 0.0038 16.3 2.4 1.1 1 0 0 1 1 1 1 Predicted coiled-coil domain-containing protein DivIC PF04977.15 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0042 16.8 7.8 0.018 14.8 3.4 2.2 1 1 1 2 2 2 1 Septum formation initiator Jnk-SapK_ap_N PF09744.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.005 17.1 3.8 0.0057 16.9 3.8 1.1 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Cob_adeno_trans PF01923.18 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0052 16.9 0.8 0.0059 16.8 0.8 1.1 1 0 0 1 1 1 1 Cobalamin adenosyltransferase DUF724 PF05266.14 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.007 16.2 2.7 0.008 16.0 2.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF724) HMMR_C PF15908.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0079 16.5 2.0 0.01 16.1 2.0 1.1 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor C-terminal Spc7 PF08317.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.0086 15.0 6.8 0.037 12.9 6.8 1.8 1 1 0 1 1 1 1 Spc7 kinetochore protein Lebercilin PF15619.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.012 15.3 7.5 0.017 14.8 7.5 1.2 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease Flu_NS2 PF00601.19 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.016 15.5 0.7 0.042 14.1 0.4 1.7 1 1 1 2 2 2 0 Influenza non-structural protein (NS2) bZIP_1 PF00170.21 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.018 15.1 2.6 0.097 12.8 0.1 2.1 2 0 0 2 2 2 0 bZIP transcription factor CLZ PF16526.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.021 15.2 5.4 0.6 10.5 1.8 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Fez1 PF06818.15 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.025 15.0 4.4 0.028 14.9 4.4 1.0 1 0 0 1 1 1 0 Fez1 K-box PF01486.17 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.026 14.7 5.6 0.15 12.2 0.3 2.1 1 1 1 2 2 2 0 K-box region Prefoldin_2 PF01920.20 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.03 14.3 6.9 0.073 13.0 1.0 2.1 1 1 1 2 2 2 0 Prefoldin subunit JAKMIP_CC3 PF16034.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.031 14.2 5.9 0.035 14.0 5.9 1.1 1 0 0 1 1 1 0 JAKMIP CC3 domain FlxA PF14282.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.042 13.9 11.5 0.28 11.2 2.2 2.1 1 1 1 2 2 2 0 FlxA-like protein CtIP_N PF10482.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.047 13.7 5.5 0.081 13.0 2.5 2.0 1 1 1 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain Csm1_N PF18504.1 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.05 13.9 6.8 0.46 10.9 1.2 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain ABC_tran_CTD PF16326.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.059 13.6 3.8 0.6 10.4 3.8 2.1 1 1 0 1 1 1 0 ABC transporter C-terminal domain Fungal_TACC PF12709.7 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.088 13.3 5.1 0.17 12.4 0.6 2.1 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins PCRF PF03462.18 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.088 12.7 3.7 0.1 12.4 3.7 1.0 1 0 0 1 1 1 0 PCRF domain Val_tRNA-synt_C PF10458.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.093 13.0 2.3 1.2 9.4 0.1 2.3 1 1 1 2 2 2 0 Valyl tRNA synthetase tRNA binding arm DUF16 PF01519.16 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.095 13.2 4.7 0.19 12.2 4.6 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 TolA_bind_tri PF16331.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.1 12.7 7.3 0.28 11.3 7.3 1.7 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF4407 PF14362.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.13 11.6 3.3 0.21 10.9 3.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Nas2_N PF18265.1 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.13 12.2 4.6 4.3 7.3 0.3 2.2 2 0 0 2 2 2 0 Nas2 N_terminal domain Cep57_CLD_2 PF14197.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.13 12.4 5.6 0.28 11.3 0.6 2.1 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 BST2 PF16716.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.16 12.6 5.4 3.2 8.4 0.6 2.0 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF3450 PF11932.8 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.19 11.0 4.6 0.23 10.7 4.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF948 PF06103.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.2 11.9 1.2 5.4 7.3 0.3 2.1 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF4200 PF13863.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.21 12.0 7.1 1.3 9.5 2.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF1640 PF07798.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.21 11.6 6.4 0.47 10.5 6.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) DUF5094 PF17015.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.27 11.3 4.3 0.33 11.0 4.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) FAM76 PF16046.5 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.28 10.5 5.8 0.36 10.1 5.8 1.3 1 0 0 1 1 1 0 FAM76 protein Macoilin PF09726.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.33 9.5 6.1 0.39 9.2 6.1 1.0 1 0 0 1 1 1 0 Macoilin family Prominin PF05478.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.38 8.6 3.9 0.4 8.6 3.9 1.0 1 0 0 1 1 1 0 Prominin DUF1664 PF07889.12 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.38 10.8 4.7 7.9 6.5 0.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.58 10.6 4.6 7.7 7.0 4.6 2.0 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) XLF PF09302.11 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.83 9.8 9.0 4 7.6 2.4 2.5 1 1 2 3 3 3 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component FliT PF05400.13 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 0.91 10.4 8.5 0.68 10.8 2.3 2.0 1 1 1 2 2 2 0 Flagellar protein FliT Atg14 PF10186.9 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 1.3 8.0 8.4 1.4 7.9 8.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 EMP24_GP25L PF01105.24 NODE_60433_length_273_cov_1.344538_g52493_i0forward_frame_2 - 1.4 8.8 4.4 1 9.3 1.4 1.9 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD 7tm_7 PF08395.12 NODE_60432_length_273_cov_1.344538_g52492_i0reverse_frame_3 - 0.019 14.2 1.2 0.02 14.1 1.2 1.0 1 0 0 1 1 1 0 7tm Chemosensory receptor Toxin_18 PF08087.11 NODE_60431_length_273_cov_1.378151_g52491_i0reverse_frame_3 - 0.0088 16.0 11.0 0.019 15.0 1.9 2.5 2 0 0 2 2 2 2 Conotoxin O-superfamily zf-C3HC4_4 PF15227.6 NODE_60431_length_273_cov_1.378151_g52491_i0forward_frame_3 - 0.31 11.2 10.5 0.53 10.5 9.5 1.9 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Ydr279_N PF17745.1 NODE_60431_length_273_cov_1.378151_g52491_i0forward_frame_2 - 0.1 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Ydr279p protein triple barrel domain DUF2201_N PF13203.6 NODE_60428_length_273_cov_1.436975_g52488_i0forward_frame_3 - 0.15 11.7 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 Putative metallopeptidase domain Phage_FRD3 PF05798.11 NODE_60427_length_273_cov_1.453782_g52487_i0forward_frame_2 - 0.071 13.4 0.0 0.094 13.0 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage FRD3 protein DUF3823 PF12866.7 NODE_60426_length_273_cov_1.470588_g52486_i0forward_frame_2 - 0.025 14.9 0.0 0.027 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3823) N-terminal domain DNA_topoisoIV PF00521.20 NODE_60424_length_273_cov_1.504202_g52484_i0forward_frame_3 - 8.1e-20 71.1 0.3 8.6e-20 71.0 0.3 1.0 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A 7tm_7 PF08395.12 NODE_60423_length_273_cov_1.512605_g52483_i0reverse_frame_2 - 0.036 13.3 0.2 0.04 13.1 0.2 1.0 1 0 0 1 1 1 0 7tm Chemosensory receptor Subtilosin_A PF11420.8 NODE_60421_length_273_cov_1.575630_g52481_i0reverse_frame_3 - 0.048 13.6 0.6 0.074 13.0 0.6 1.3 1 0 0 1 1 1 0 Bacteriocin subtilosin A Amnionless PF14828.6 NODE_60421_length_273_cov_1.575630_g52481_i0forward_frame_3 - 0.36 9.6 4.4 0.45 9.3 4.4 1.0 1 0 0 1 1 1 0 Amnionless PDEase_II PF02112.15 NODE_60420_length_273_cov_1.584034_g52480_i0reverse_frame_2 - 0.083 12.0 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II ACR_tran PF00873.19 NODE_60420_length_273_cov_1.584034_g52480_i0forward_frame_3 - 0.031 12.0 0.6 0.035 11.8 0.6 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family Defensin_beta PF00711.19 NODE_60419_length_273_cov_1.630252_g52479_i0forward_frame_2 - 0.56 10.3 0.2 0.56 10.3 0.2 2.9 3 0 0 3 3 3 0 Beta defensin DUF5076 PF16826.5 NODE_60418_length_273_cov_1.634454_g52478_i0reverse_frame_2 - 0.074 13.0 0.0 0.24 11.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5076) Auxin_inducible PF02519.14 NODE_60418_length_273_cov_1.634454_g52478_i0forward_frame_3 - 0.0071 16.5 0.1 0.0088 16.2 0.1 1.1 1 0 0 1 1 1 1 Auxin responsive protein Exo_endo_phos PF03372.23 NODE_60418_length_273_cov_1.634454_g52478_i0forward_frame_2 - 0.011 15.3 0.0 0.012 15.1 0.0 1.0 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family EF-hand_7 PF13499.6 NODE_60417_length_273_cov_1.668067_g52477_i0forward_frame_2 - 0.00072 20.0 0.2 0.0013 19.2 0.1 1.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_60417_length_273_cov_1.668067_g52477_i0forward_frame_2 - 0.0031 16.9 0.0 0.0056 16.1 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 NODE_60417_length_273_cov_1.668067_g52477_i0forward_frame_2 - 0.042 13.7 0.0 0.064 13.1 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair RICTOR_M PF14666.6 NODE_60415_length_273_cov_1.680672_g52475_i0forward_frame_2 - 0.074 12.8 0.1 0.097 12.4 0.1 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain IL17 PF06083.11 NODE_60414_length_273_cov_1.701681_g52474_i0forward_frame_3 - 0.053 14.0 1.2 0.07 13.6 1.2 1.2 1 0 0 1 1 1 0 Interleukin-17 DUF1187 PF06688.11 NODE_60413_length_273_cov_1.705882_g52473_i0reverse_frame_3 - 0.055 13.8 0.0 0.084 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1187) LepB_GAP_C PF18227.1 NODE_60411_length_273_cov_1.710084_g52471_i0reverse_frame_2 - 0.0024 18.4 0.0 0.0035 17.8 0.0 1.2 1 0 0 1 1 1 1 LepB GAP domain C-terminal subdomain cNMP_binding PF00027.29 NODE_60410_length_273_cov_1.714286_g52470_i0forward_frame_2 - 0.014 15.5 0.0 0.018 15.1 0.0 1.1 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain HSBP1 PF06825.12 NODE_60410_length_273_cov_1.714286_g52470_i0forward_frame_2 - 0.15 11.9 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Heat shock factor binding protein 1 SirB PF04247.12 NODE_60409_length_273_cov_1.752101_g52469_i0reverse_frame_3 - 0.019 15.1 1.1 0.022 14.9 1.1 1.0 1 0 0 1 1 1 0 Invasion gene expression up-regulator, SirB DUF5613 PF18467.1 NODE_60399_length_273_cov_1.873950_g52459_i0forward_frame_3 - 0.0089 16.4 0.5 0.019 15.3 0.2 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF5613) USP8_dimer PF08969.11 NODE_60397_length_273_cov_1.970588_g52457_i0forward_frame_2 - 0.013 15.7 2.3 0.016 15.4 1.8 1.3 1 1 0 1 1 1 0 USP8 dimerisation domain GTP_EFTU_D2 PF03144.25 NODE_60394_length_273_cov_1.983193_g52454_i0forward_frame_2 - 0.01 16.2 0.7 0.014 15.8 0.7 1.2 1 0 0 1 1 1 0 Elongation factor Tu domain 2 Corazonin PF17308.2 NODE_60392_length_273_cov_2.071429_g52452_i0reverse_frame_2 - 0.047 14.1 0.0 0.05 14.0 0.0 1.1 1 0 0 1 1 1 0 Pro-corazonin OST_P2 PF18235.1 NODE_60392_length_273_cov_2.071429_g52452_i0forward_frame_2 - 0.0074 16.2 0.2 0.0089 16.0 0.2 1.1 1 0 0 1 1 1 1 Oligosaccharyltransferase Peripheral 2 domain Sugar_tr PF00083.24 NODE_60390_length_273_cov_2.117647_g52450_i0reverse_frame_2 - 0.00082 18.3 2.0 0.0031 16.4 1.3 1.8 1 1 0 1 1 1 1 Sugar (and other) transporter Fijivirus_P9-2 PF06837.11 NODE_60390_length_273_cov_2.117647_g52450_i0reverse_frame_2 - 0.06 12.8 5.5 0.064 12.7 5.5 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein Lamprin PF06403.11 NODE_60389_length_273_cov_2.130252_g52449_i0forward_frame_2 - 0.072 13.1 1.6 0.08 12.9 1.6 1.2 1 0 0 1 1 1 0 Lamprin Herpes_UL52 PF03121.15 NODE_60388_length_273_cov_2.147059_g52448_i0reverse_frame_3 - 0.1 12.5 1.2 0.23 11.4 1.2 1.8 1 1 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase Cytochrome_C554 PF13435.6 NODE_60388_length_273_cov_2.147059_g52448_i0reverse_frame_2 - 0.76 10.7 10.1 1.2 10.1 10.1 1.3 1 0 0 1 1 1 0 Cytochrome c554 and c-prime FAM176 PF14851.6 NODE_60388_length_273_cov_2.147059_g52448_i0forward_frame_3 - 5.8 6.6 10.7 7.2 6.3 4.7 2.1 1 1 1 2 2 2 0 FAM176 family Rtt106 PF08512.12 NODE_60387_length_273_cov_2.180672_g52447_i0reverse_frame_2 - 0.061 13.7 0.5 0.076 13.4 0.5 1.1 1 0 0 1 1 1 0 Histone chaperone Rttp106-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks297.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks297.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks297.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks297.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L35Ae PF01247.18 NODE_60385_length_273_cov_2.378151_g52445_i0reverse_frame_3 - 0.13 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L35Ae SwrA PF17423.2 NODE_60383_length_273_cov_2.407563_g52443_i0forward_frame_3 - 0.0035 17.3 0.6 0.0042 17.1 0.6 1.2 1 0 0 1 1 1 1 Swarming motility protein DUF1359 PF07097.11 NODE_60382_length_273_cov_2.487395_g52442_i0forward_frame_3 - 0.05 13.8 0.2 0.067 13.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1359) LapA_dom PF06305.11 NODE_60380_length_273_cov_2.546218_g52440_i0forward_frame_3 - 1.7 8.5 4.4 0.36 10.7 1.0 1.6 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain ExsD PF16806.5 NODE_60380_length_273_cov_2.546218_g52440_i0forward_frame_2 - 0.072 13.0 1.8 0.083 12.8 1.8 1.2 1 0 0 1 1 1 0 Antiactivator protein ExsD TetR_C_8 PF14278.6 NODE_60376_length_273_cov_2.651261_g52436_i0reverse_frame_2 - 0.0095 16.0 0.5 0.012 15.7 0.5 1.1 1 0 0 1 1 1 1 Transcriptional regulator C-terminal region Fuseless PF15993.5 NODE_60373_length_273_cov_2.878151_g52433_i0reverse_frame_2 - 0.021 14.1 0.3 0.021 14.1 0.3 1.2 1 0 0 1 1 1 0 Fuseless ATP-synt_F6 PF05511.11 NODE_60373_length_273_cov_2.878151_g52433_i0forward_frame_2 - 0.16 12.4 0.1 0.39 11.2 0.0 1.6 1 1 1 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 Herpes_TK PF00693.18 NODE_60371_length_273_cov_3.126050_g52431_i0reverse_frame_3 - 0.099 11.9 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Thymidine kinase from herpesvirus TMEM213 PF15192.6 NODE_60368_length_273_cov_3.315126_g52428_i0reverse_frame_3 - 0.26 11.3 3.0 0.23 11.4 1.7 1.6 1 1 1 2 2 2 0 TMEM213 family DUF3341 PF11821.8 NODE_60367_length_273_cov_3.403361_g52427_i0forward_frame_3 - 0.016 14.9 0.1 0.02 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) VirB3 PF05101.13 NODE_60365_length_273_cov_4.058824_g52425_i0reverse_frame_3 - 0.055 13.7 1.9 0.066 13.5 1.5 1.4 1 1 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein FA_desaturase PF00487.24 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.016 15.1 2.3 0.018 14.9 2.3 1.0 1 0 0 1 1 1 0 Fatty acid desaturase Wzy_C PF04932.15 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.17 11.5 3.8 0.22 11.2 3.8 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF2207 PF09972.9 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.26 10.0 2.4 0.28 9.9 2.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Glyco_trans_2_3 PF13632.6 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.44 10.4 6.1 0.49 10.3 6.1 1.0 1 0 0 1 1 1 0 Glycosyl transferase family group 2 DUF4191 PF13829.6 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.56 9.5 3.2 0.61 9.4 3.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Ac81 PF05820.11 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 0.96 9.0 6.3 1.1 8.8 6.3 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 SdpI PF13630.6 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_3 - 2.3 8.4 4.6 3.5 7.8 4.6 1.3 1 0 0 1 1 1 0 SdpI/YhfL protein family FSA_C PF10479.9 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_2 - 0.02 13.1 10.4 0.019 13.1 10.4 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Mucin PF01456.17 NODE_60364_length_273_cov_4.264706_g52424_i0reverse_frame_2 - 0.18 11.8 33.4 0.22 11.5 33.4 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein Secretin_N_2 PF07655.13 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 0.0023 18.4 11.7 0.0028 18.2 11.7 1.1 1 0 0 1 1 1 1 Secretin N-terminal domain CDK2AP PF09806.9 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 0.15 12.1 7.6 0.17 11.9 7.6 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein DUF4614 PF15391.6 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 0.26 11.3 10.2 0.26 11.2 10.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) Apt1 PF10351.9 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 0.6 8.9 5.7 0.56 9.0 5.7 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain CCDC24 PF15669.5 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 2.5 7.9 7.6 3 7.7 7.6 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family GP40 PF11025.8 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 2.7 7.7 10.6 3.2 7.5 10.6 1.1 1 0 0 1 1 1 0 Glycoprotein GP40 of Cryptosporidium SSP160 PF06933.11 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 2.8 6.0 20.7 3.2 5.8 20.7 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Macoilin PF09726.9 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 3.7 6.0 9.0 3.6 6.0 9.0 1.0 1 0 0 1 1 1 0 Macoilin family NAM-associated PF14303.6 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 4 8.1 5.9 4.5 8.0 5.9 1.1 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain RSRP PF17069.5 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 4.5 6.8 27.9 5.1 6.6 27.9 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 CCDC106 PF15794.5 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 6.3 6.4 7.7 6.8 6.3 7.7 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 X PF00739.19 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 6.6 6.9 11.3 8.1 6.6 11.3 1.1 1 0 0 1 1 1 0 Trans-activation protein X DUF515 PF04415.12 NODE_60364_length_273_cov_4.264706_g52424_i0forward_frame_3 - 9.9 4.4 17.0 10 4.4 17.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Phage_holin_3_6 PF07332.11 NODE_60363_length_273_cov_4.432773_g52423_i0reverse_frame_3 - 0.11 12.6 1.1 0.12 12.4 1.1 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4834 PF16118.5 NODE_60363_length_273_cov_4.432773_g52423_i0forward_frame_3 - 0.025 15.5 0.2 0.03 15.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) NAD_binding_7 PF13241.6 NODE_60360_length_273_cov_5.247899_g52420_i0reverse_frame_2 - 0.11 13.0 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative NAD(P)-binding dbPDZ_assoc PF16610.5 NODE_60356_length_273_cov_20.516807_g52416_i0reverse_frame_3 - 0.18 12.0 1.2 0.44 10.8 1.2 1.7 1 1 0 1 1 1 0 Unstructured region between two PDZ domains on Dlg5 APC_N_CC PF16689.5 NODE_60356_length_273_cov_20.516807_g52416_i0reverse_frame_3 - 0.18 11.9 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain DHR-2 PF06920.13 NODE_60355_length_273_cov_23.071429_g52415_i0reverse_frame_3 - 0.0077 14.9 0.6 0.0091 14.7 0.6 1.0 1 0 0 1 1 1 1 Dock homology region 2 Myticin-prepro PF10690.9 NODE_60354_length_273_cov_24.348739_g52414_i0reverse_frame_3 - 0.44 10.8 9.0 0.51 10.6 9.0 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel RITA PF17066.5 NODE_60350_length_273_cov_41.189076_g52410_i0reverse_frame_3 - 0.066 12.8 2.8 0.51 9.9 0.1 2.0 1 1 1 2 2 2 0 RBPJ-interacting and tubulin associated protein Rpr2 PF04032.16 NODE_60350_length_273_cov_41.189076_g52410_i0reverse_frame_2 - 0.74 10.1 6.7 1.2 9.5 6.7 1.4 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF5570 PF17731.1 NODE_60349_length_273_cov_47.079832_g52409_i0reverse_frame_2 - 0.0052 16.9 1.9 0.0058 16.7 1.9 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5570) HD_6 PF18019.1 NODE_60347_length_273_cov_54.957983_g52407_i0forward_frame_2 - 0.11 12.5 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 HD domain DUF3336 PF11815.8 NODE_60342_length_273_cov_60.025210_g52402_i0forward_frame_3 - 0.016 14.9 0.4 0.023 14.4 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3336) POM121 PF15229.6 NODE_60341_length_273_cov_60.205882_g52401_i0reverse_frame_2 - 0.32 10.6 1.0 0.35 10.5 1.0 1.0 1 0 0 1 1 1 0 POM121 family Fer4_21 PF14697.6 NODE_60338_length_273_cov_66.777311_g52398_i0reverse_frame_3 - 0.02 15.0 0.7 0.026 14.7 0.7 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain YLP PF02757.17 NODE_60337_length_273_cov_68.315126_g52397_i0forward_frame_3 - 0.058 13.4 4.1 5.2 7.3 0.3 2.3 2 0 0 2 2 2 0 YLP motif DUF1179 PF06678.11 NODE_60337_length_273_cov_68.315126_g52397_i0forward_frame_2 - 5.3 7.1 5.7 7.2 6.6 1.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1179) TTL PF03133.15 NODE_60336_length_273_cov_69.117647_g52396_i0forward_frame_3 - 3.2e-07 29.8 0.1 3.9e-07 29.5 0.1 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family zf-CCCH_6 PF18585.1 NODE_60333_length_273_cov_77.403361_g52393_i0reverse_frame_2 - 0.024 14.5 0.2 0.1 12.5 0.0 1.9 1 1 1 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 DUF2390 PF09523.10 NODE_60333_length_273_cov_77.403361_g52393_i0forward_frame_2 - 0.062 13.6 0.0 0.07 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2390) TMEM40 PF15817.5 NODE_60332_length_273_cov_80.878151_g52392_i0forward_frame_3 - 0.013 15.2 2.3 0.015 15.0 2.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 40 family Borrelia_P83 PF05262.11 NODE_60331_length_273_cov_85.848739_g52391_i0forward_frame_2 - 1.5 7.3 9.3 1.6 7.1 9.3 1.2 1 1 0 1 1 1 0 Borrelia P83/100 protein DAN PF03045.15 NODE_60329_length_273_cov_89.449580_g52389_i0reverse_frame_3 - 0.026 14.5 0.3 0.044 13.8 0.3 1.4 1 0 0 1 1 1 0 DAN domain Arg_repressor_C PF02863.18 NODE_60326_length_273_cov_100.491597_g52386_i0reverse_frame_3 - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Arginine repressor, C-terminal domain Arm_vescicular PF18770.1 NODE_60323_length_273_cov_129.247899_g52383_i0forward_frame_3 - 0.084 12.8 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor Rhabdo_matrix PF03397.14 NODE_60316_length_273_cov_176.079832_g52376_i0reverse_frame_3 - 0.058 13.1 0.0 0.062 13.1 0.0 1.0 1 0 0 1 1 1 0 Rhabdovirus matrix protein zf-RING_4 PF14570.6 NODE_60316_length_273_cov_176.079832_g52376_i0forward_frame_3 - 1.5 8.7 11.3 1.2 9.0 0.5 2.4 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain Phage_T4_Gp30_7 PF06919.11 NODE_60315_length_273_cov_201.840336_g52375_i0reverse_frame_2 - 0.11 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Phage Gp30.7 protein PriCT_2 PF08707.11 NODE_60312_length_273_cov_375.630252_g52372_i0reverse_frame_3 - 0.076 13.4 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Primase C terminal 2 (PriCT-2) ANAPC4 PF12896.7 NODE_60310_length_273_cov_410.378151_g52370_i0forward_frame_3 - 0.035 13.6 0.0 0.044 13.3 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 TA0956 PF11513.8 NODE_60308_length_273_cov_1488.373950_g52368_i0reverse_frame_2 - 0.046 14.0 0.5 0.051 13.8 0.5 1.2 1 0 0 1 1 1 0 Thermoplasma acidophilum protein TA0956 UNC119_bdg PF15435.6 NODE_60304_length_273_cov_9678.827731_g52364_i0forward_frame_2 - 0.019 14.5 0.1 0.025 14.2 0.1 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue DUF1433 PF07252.11 ORF99743 - 0.039 14.2 0.4 0.091 13.0 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1433) KASH PF10541.9 ORF97958 - 0.12 12.6 0.1 0.2 12.0 0.1 1.2 1 0 0 1 1 1 0 Nuclear envelope localisation domain CitG PF01874.16 ORF97958 - 0.17 11.5 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 ATP:dephospho-CoA triphosphoribosyl transferase Saf_2TM PF18303.1 ORF97855 - 0.15 11.7 0.9 0.17 11.5 0.9 1.0 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain SecE PF00584.20 ORF97772 - 6.8 6.7 10.9 5.7 6.9 4.5 2.3 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex DUF4332 PF14229.6 ORF97642 - 0.16 12.2 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) DUF308 PF03729.13 ORF97437 - 0.029 14.7 3.9 0.029 14.7 3.9 1.5 2 0 0 2 2 2 0 Short repeat of unknown function (DUF308) WD40 PF00400.32 ORF96175 - 0.0036 18.1 0.1 0.52 11.3 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat 4HB PF17947.1 ORF96175 - 0.15 12.1 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Four helical bundle domain SieB PF14163.6 ORF9608 - 0.019 14.4 0.6 0.023 14.2 0.6 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B ATF7IP_BD PF16788.5 ORF9563 - 0.26 11.4 0.1 0.27 11.3 0.1 1.0 1 0 0 1 1 1 0 ATF-interacting protein binding domain RINGv PF12906.7 ORF95445 - 0.0099 16.0 0.5 0.021 15.0 0.1 1.7 2 0 0 2 2 2 1 RING-variant domain DUF3774 PF12609.8 ORF95445 - 0.039 15.0 0.2 0.043 14.8 0.2 1.2 1 0 0 1 1 1 0 Wound-induced protein ADAM_CR_2 PF17771.1 ORF9543 - 0.086 13.4 0.1 0.14 12.6 0.1 1.4 1 0 0 1 1 1 0 ADAM cysteine-rich domain DUF2516 PF10724.9 ORF95363 - 0.017 15.4 0.7 0.018 15.3 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2516) zf-RING_2 PF13639.6 ORF94197 - 2.6e-09 37.3 13.8 3.4e-09 36.9 13.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF94197 - 8.6e-07 28.9 8.1 1.2e-06 28.4 8.1 1.2 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF94197 - 5.6e-06 26.1 14.0 7.5e-06 25.7 14.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF94197 - 1.7e-05 24.5 13.5 1.7e-05 24.5 13.5 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF94197 - 0.00029 21.0 13.5 0.00088 19.5 13.5 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF94197 - 0.0012 18.6 15.1 0.0034 17.2 15.1 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF94197 - 0.0065 16.4 12.7 0.0098 15.8 12.7 1.3 1 0 0 1 1 1 1 zinc-RING finger domain FANCL_C PF11793.8 ORF94197 - 0.0087 16.2 13.2 0.023 14.9 13.2 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF94197 - 0.01 15.5 13.4 0.018 14.6 13.4 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF94197 - 0.01 15.9 8.3 0.026 14.6 8.4 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF94197 - 0.039 13.8 10.7 0.056 13.3 10.7 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zf_RING PF16744.5 ORF94197 - 0.12 12.5 1.1 0.12 12.5 1.1 2.4 1 1 1 2 2 2 0 KIAA1045 RING finger zf-C3HC4_4 PF15227.6 ORF94197 - 1.1 9.5 13.3 18 5.6 13.0 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Pyr_redox_2 PF07992.14 ORF94190 - 0.00023 20.5 0.1 0.00025 20.4 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 ORF94190 - 0.14 12.2 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 FAD-NAD(P)-binding RVT_3 PF13456.6 ORF93494 - 0.093 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase-like IGF2_C PF08365.11 ORF93 - 0.11 12.5 2.0 0.82 9.7 1.7 2.2 2 0 0 2 2 2 0 Insulin-like growth factor II E-peptide DUF3984 PF13136.6 ORF90878 - 0.038 13.4 2.5 0.042 13.3 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3984) DUF3079 PF11278.8 ORF90524 - 0.041 13.7 0.4 0.076 12.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3079) LSM PF01423.22 ORF90056 - 1e-17 63.5 0.6 1.3e-17 63.2 0.6 1.2 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 ORF90056 - 0.0023 17.5 0.0 0.003 17.2 0.0 1.3 1 0 0 1 1 1 1 Hfq protein B12D PF06522.11 ORF90028 - 0.14 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit NAD_binding_10 PF13460.6 ORF89494 - 0.0017 18.3 0.0 0.0019 18.1 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Metallothio_Cad PF07846.11 ORF88739 - 0.32 11.1 1.7 20 5.4 0.0 3.1 3 0 0 3 3 3 0 Metallothionein family TSP_1 PF00090.19 ORF88739 - 0.51 10.6 2.9 11 6.3 0.6 2.2 1 1 1 2 2 2 0 Thrombospondin type 1 domain DUF2684 PF10885.8 ORF87776 - 0.056 13.6 0.5 0.076 13.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) SHIPPO-rpt PF07004.12 ORF8720 - 0.02 15.8 0.7 0.036 15.0 0.0 1.8 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat RRM_1 PF00076.22 ORF86767 - 0.2 11.5 0.0 0.35 10.7 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Med27 PF11571.8 ORF86754 - 0.065 13.6 0.4 0.092 13.1 0.4 1.4 1 1 0 1 1 1 0 Mediator complex subunit 27 DUF2949 PF11165.8 ORF86754 - 0.099 13.0 0.1 0.19 12.1 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2949) UFD1 PF03152.14 ORF86321 - 0.045 13.2 0.1 0.046 13.2 0.1 1.1 1 0 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 COX17 PF05051.13 ORF85701 - 3.4e-19 68.9 7.7 3.4e-19 68.9 7.7 2.2 2 1 0 2 2 2 1 Cytochrome C oxidase copper chaperone (COX17) COX7a PF02238.15 ORF85661 - 0.13 12.7 0.6 4.2 7.8 0.5 2.4 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII DUF4054 PF13262.6 ORF84652 - 0.039 14.0 0.1 0.045 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4054) DUF1180 PF06679.12 ORF84148 - 5.2 7.5 6.1 5.7 7.3 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Prok-RING_1 PF14446.6 ORF84085 - 0.0024 17.7 0.8 0.012 15.5 0.1 2.0 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Rpr2 PF04032.16 ORF84085 - 0.038 14.3 0.4 0.048 13.9 0.4 1.2 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain C1_1 PF00130.22 ORF84085 - 0.051 13.5 5.1 1.7 8.6 0.0 2.3 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RING_5 PF14634.6 ORF84085 - 1.1 9.3 6.5 3.3 7.7 6.4 2.0 1 1 0 1 1 1 0 zinc-RING finger domain DUF816 PF05674.12 ORF83904 - 0.014 15.3 0.4 0.015 15.2 0.4 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF816) But2 PF09792.9 ORF83859 - 0.11 12.9 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin 3 binding protein But2 C-terminal domain zf-UBR PF02207.20 ORF83665 - 0.022 14.9 0.3 0.031 14.4 0.3 1.2 1 0 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) GP41 PF00517.17 ORF82722 - 0.074 13.0 0.4 0.08 12.8 0.4 1.1 1 0 0 1 1 1 0 Retroviral envelope protein DUF2671 PF10877.8 ORF81928 - 0.012 15.4 0.1 0.94 9.3 0.0 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2671) BT1 PF03092.16 ORF81780 - 3 6.0 8.4 6.9 4.8 8.1 1.7 1 1 1 2 2 2 0 BT1 family DUF104 PF01954.16 ORF81682 - 0.047 14.1 0.0 0.097 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF104 PIG-H PF10181.9 ORF81074 - 0.0064 16.3 0.0 0.0097 15.8 0.0 1.4 1 0 0 1 1 1 1 GPI-GlcNAc transferase complex, PIG-H component Pro_isomerase PF00160.21 ORF8103 - 0.001 19.4 0.0 0.0012 19.1 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISG65-75 PF11727.8 ORF80961 - 0.024 13.9 0.3 0.026 13.8 0.3 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein Peptidase_C97 PF05903.14 ORF80694 - 1.4e-19 70.4 0.0 1.5e-19 70.3 0.0 1.0 1 0 0 1 1 1 1 PPPDE putative peptidase domain BRX_N PF13713.6 ORF80694 - 0.099 12.4 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Transcription factor BRX N-terminal domain Bac_rhamnosid6H PF17389.2 ORF80523 - 0.042 13.1 0.0 0.048 12.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DUF4462 PF14692.6 ORF79968 - 3.2 7.3 10.1 6 6.4 0.9 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4462) Ndc1_Nup PF09531.10 ORF788 - 9.4 4.8 9.7 9.9 4.7 9.7 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF4400 PF14348.6 ORF78102 - 0.21 11.1 2.0 0.25 10.8 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) DuoxA PF10204.9 ORF77889 - 0.034 13.2 0.0 0.045 12.8 0.0 1.1 1 0 0 1 1 1 0 Dual oxidase maturation factor DUF2569 PF10754.9 ORF77456 - 0.033 14.6 0.2 0.038 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) Herpes_pp85 PF04637.12 ORF76579 - 7.5 4.8 6.5 3.5 5.9 0.7 1.9 1 1 1 2 2 2 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Kisspeptin PF15152.6 ORF76579 - 8 7.3 10.3 2.8 8.8 4.3 2.0 1 1 1 2 2 2 0 Kisspeptin DUF1073 PF06381.11 ORF75892 - 5.2e-25 88.0 0.0 5.6e-25 87.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1073) Nudc_N PF14050.6 ORF75710 - 0.03 14.3 0.2 0.044 13.8 0.2 1.3 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. SOR PF07682.11 ORF74468 - 0.016 14.2 0.5 0.016 14.2 0.5 1.1 1 0 0 1 1 1 0 Sulphur oxygenase reductase Antimicrobial25 PF16839.5 ORF74358 - 0.0074 16.4 1.7 0.014 15.4 1.7 1.5 1 1 0 1 1 1 1 Nematode antimicrobial peptide ACP_PD PF04336.12 ORF73434 - 0.058 13.8 0.0 0.11 12.9 0.0 1.4 1 1 0 1 1 1 0 Acyl carrier protein phosphodiesterase z-alpha PF02295.17 ORF73434 - 0.062 13.3 3.4 0.088 12.9 3.4 1.2 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain RabGAP-TBC PF00566.18 ORF73434 - 0.093 12.4 4.6 0.11 12.1 4.6 1.0 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Lipoprotein_3 PF00938.17 ORF73434 - 0.12 12.5 4.2 0.13 12.5 1.7 2.0 1 1 1 2 2 2 0 Lipoprotein TMPIT PF07851.13 ORF73434 - 0.82 8.9 4.1 0.88 8.8 4.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein Glyco_transf_41 PF13844.6 ORF73364 - 0.052 12.0 0.0 0.058 11.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 41 Herpes_UL49_5 PF05702.11 ORF73317 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein Cys_Knot_tox PF17486.2 ORF72877 - 0.016 15.4 0.4 0.032 14.4 0.1 1.6 1 1 1 2 2 2 0 Cystine knot toxins zf-RING-like PF08746.11 ORF72445 - 0.12 12.7 1.8 0.19 12.0 1.8 1.4 1 0 0 1 1 1 0 RING-like domain Lipoprotein_10 PF03202.13 ORF72392 - 0.088 13.2 0.0 0.1 13.0 0.0 1.0 1 0 0 1 1 1 0 Putative mycoplasma lipoprotein, C-terminal region PFU PF09070.11 ORF72018 - 8.9e-05 22.7 0.2 0.0001 22.6 0.2 1.1 1 0 0 1 1 1 1 PFU (PLAA family ubiquitin binding) Peptidase_C34 PF05413.11 ORF71444 - 0.17 12.2 0.1 3.6 7.9 0.0 2.0 1 1 1 2 2 2 0 Putative closterovirus papain-like endopeptidase LcrV PF04792.12 ORF69001 - 0.038 13.3 0.9 0.039 13.2 0.9 1.1 1 0 0 1 1 1 0 V antigen (LcrV) protein KAR9 PF08580.10 ORF6819 - 0.057 12.0 6.8 0.055 12.0 6.8 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 MgsA_C PF12002.8 ORF6819 - 0.096 12.6 0.2 0.11 12.5 0.2 1.1 1 0 0 1 1 1 0 MgsA AAA+ ATPase C terminal NUDE_C PF04880.13 ORF6819 - 2.8 8.4 7.7 3.2 8.2 7.7 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Ras PF00071.22 ORF68106 - 5.9e-30 104.0 0.4 6.3e-30 103.9 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF68106 - 2.1e-17 63.5 0.2 2.5e-17 63.2 0.2 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF68106 - 2.2e-05 24.0 0.2 2.2e-05 24.0 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF68106 - 0.018 14.6 0.1 0.02 14.4 0.1 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Dynein_light PF01221.18 ORF68052 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF68052 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin Pkinase PF00069.25 ORF68034 - 0.028 13.8 0.0 0.04 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain Herpes_UL49_5 PF05702.11 ORF67998 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein Herpes_UL49_5 PF05702.11 ORF67672 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein Vfa1 PF08432.10 ORF67648 - 0.005 17.2 0.9 0.0067 16.8 0.9 1.2 1 0 0 1 1 1 1 AAA-ATPase Vps4-associated protein 1 KAR9 PF08580.10 ORF66925 - 0.057 12.0 6.8 0.055 12.0 6.8 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 MgsA_C PF12002.8 ORF66925 - 0.096 12.6 0.2 0.11 12.5 0.2 1.1 1 0 0 1 1 1 0 MgsA AAA+ ATPase C terminal NUDE_C PF04880.13 ORF66925 - 2.8 8.4 7.7 3.2 8.2 7.7 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region IL3Ra_N PF18611.1 ORF66849 - 0.11 12.5 2.0 9.2 6.3 0.1 2.2 2 0 0 2 2 2 0 IL-3 receptor alpha chain N-terminal domain PTS-HPr PF00381.19 ORF66751 - 7.9e-23 80.5 0.5 8.6e-23 80.4 0.5 1.0 1 0 0 1 1 1 1 PTS HPr component phosphorylation site zf-Tim10_DDP PF02953.15 ORF65315 - 0.00011 21.7 1.1 0.00015 21.3 1.1 1.4 1 1 0 1 1 1 1 Tim10/DDP family zinc finger DUF3398 PF11878.8 ORF65315 - 0.022 15.2 0.1 0.025 15.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3398) Peptidase_A4 PF01828.17 ORF65238 - 0.11 12.0 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase A4 family Glyco_transf_41 PF13844.6 ORF652 - 0.052 12.0 0.0 0.058 11.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 41 DUF2162 PF09930.9 ORF64800 - 0.041 13.3 9.4 0.047 13.1 9.4 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) DUF2070 PF09843.9 ORF64800 - 1.8 6.8 6.8 1.8 6.7 6.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Antimicrobial25 PF16839.5 ORF64251 - 0.16 12.1 2.3 0.32 11.1 2.4 1.6 1 1 1 2 2 2 0 Nematode antimicrobial peptide DUF2162 PF09930.9 ORF63859 - 0.041 13.3 9.4 0.047 13.1 9.4 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) DUF2070 PF09843.9 ORF63859 - 1.8 6.8 6.8 1.8 6.7 6.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3671 PF12420.8 ORF63822 - 0.065 13.3 7.1 0.065 13.3 5.6 1.8 1 1 0 1 1 1 0 Protein of unknown function Vfa1 PF08432.10 ORF63620 - 0.005 17.2 0.9 0.0067 16.8 0.9 1.2 1 0 0 1 1 1 1 AAA-ATPase Vps4-associated protein 1 DM PF00751.18 ORF62662 - 1.6 8.7 11.7 9.2 6.3 11.7 2.2 1 1 0 1 1 1 0 DM DNA binding domain Cyt_bd_oxida_I PF01654.17 ORF60807 - 0.015 13.9 4.7 0.016 13.8 4.7 1.0 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit I DUF3638 PF12340.8 ORF5934 - 0.011 15.1 0.0 0.012 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3638) Defensin_beta PF00711.19 ORF59223 - 0.012 15.6 0.4 0.012 15.6 0.4 1.7 2 0 0 2 2 2 0 Beta defensin Dynein_light PF01221.18 ORF58676 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF58676 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin LPG_synthase_TM PF03706.13 ORF58393 - 0.056 13.0 0.4 0.062 12.8 0.4 1.0 1 0 0 1 1 1 0 Lysylphosphatidylglycerol synthase TM region RE_HindIII PF09518.10 ORF58231 - 0.0015 17.8 0.5 0.0016 17.7 0.5 1.0 1 0 0 1 1 1 1 HindIII restriction endonuclease T3SS_basalb_I PF17001.5 ORF58231 - 0.032 14.8 0.9 0.049 14.2 0.9 1.4 1 1 0 1 1 1 0 Type III secretion basal body protein I, YscI, HrpB, PscI IRF-2BP1_2 PF11261.8 ORF58231 - 0.13 11.9 0.0 0.49 10.0 0.0 1.8 2 0 0 2 2 2 0 Interferon regulatory factor 2-binding protein zinc finger Fib_alpha PF08702.10 ORF58231 - 0.22 11.7 5.2 0.12 12.5 3.5 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2457 PF10446.9 ORF57848 - 2.6 7.1 4.8 3 6.9 4.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) GST_C PF00043.25 ORF57583 - 0.012 15.9 0.0 0.016 15.4 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain B12D PF06522.11 ORF57381 - 0.14 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Herpes_UL49_5 PF05702.11 ORF57210 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein Dynein_light PF01221.18 ORF55908 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF55908 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin HCV_NS5a PF01506.19 ORF55824 - 0.81 9.6 5.4 0.4 10.6 2.3 2.0 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a protein membrane anchor DUF3993 PF13158.6 ORF55717 - 0.084 13.1 0.2 0.15 12.3 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3993) XPG_N PF00752.17 ORF55717 - 0.11 13.0 0.1 0.19 12.2 0.1 1.5 1 1 0 1 1 1 0 XPG N-terminal domain Receptor_2B4 PF11465.8 ORF55488 - 0.025 14.8 0.3 0.028 14.6 0.3 1.2 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 Bac_rhamnosid6H PF17389.2 ORF55111 - 0.042 13.1 0.0 0.048 12.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain VQ PF05678.14 ORF53721 - 0.13 11.8 1.5 0.28 10.7 1.5 1.5 1 0 0 1 1 1 0 VQ motif zf-C3HC4_3 PF13920.6 ORF53442 - 3.1e-09 36.5 7.7 4.2e-09 36.1 7.7 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF53442 - 6.5e-06 25.9 7.4 9.9e-06 25.3 7.4 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF53442 - 0.00043 20.6 7.6 0.00062 20.0 7.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF53442 - 0.0043 16.9 7.8 0.0072 16.2 7.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF53442 - 0.077 13.0 8.2 0.12 12.4 8.2 1.3 1 0 0 1 1 1 0 zinc-RING finger domain zf-RING_4 PF14570.6 ORF53442 - 0.36 10.7 6.8 0.69 9.8 6.8 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Pyr_redox_2 PF07992.14 ORF52201 - 0.00023 20.5 0.1 0.00025 20.4 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 ORF52201 - 0.14 12.2 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 FAD-NAD(P)-binding Popeye PF04831.13 ORF50858 - 0.12 12.5 1.7 0.15 12.3 1.7 1.1 1 0 0 1 1 1 0 Popeye protein conserved region TAN PF11640.8 ORF50364 - 0.019 15.1 0.4 0.022 14.9 0.4 1.1 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair VASt PF16016.5 ORF50364 - 0.085 13.3 0.1 0.089 13.2 0.1 1.2 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain Meis_PKNOX_N PF16493.5 ORF50297 - 0.26 11.7 2.5 0.39 11.1 2.5 1.4 1 1 0 1 1 1 0 N-terminal of Homeobox Meis and PKNOX1 MIF PF01187.18 ORF49949 - 0.0085 16.4 0.1 0.01 16.1 0.1 1.1 1 0 0 1 1 1 1 Macrophage migration inhibitory factor (MIF) FKBP_C PF00254.28 ORF49881 - 0.0058 16.9 0.0 0.0083 16.4 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Apc13p PF05839.11 ORF49726 - 0.0006 19.9 1.1 0.0011 19.1 1.1 1.5 1 1 0 1 1 1 1 Apc13p protein MORN PF02493.20 ORF49560 - 2e-19 68.2 23.3 7.3e-10 38.2 2.1 4.3 5 0 0 5 5 5 4 MORN repeat V_ATPase_I PF01496.19 ORF48860 - 0.051 11.5 5.5 0.052 11.5 5.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family SWIM PF04434.17 ORF48310 - 0.24 11.1 3.5 2.3 8.0 0.5 2.3 2 0 0 2 2 2 0 SWIM zinc finger Hep_core_N PF08290.11 ORF48310 - 0.35 10.9 4.3 13 5.9 0.3 2.7 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger Herpes_UL49_5 PF05702.11 ORF46132 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein RET_CLD1 PF17756.1 ORF45474 - 0.088 13.1 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 RET Cadherin like domain 1 TNFR_16_TM PF18422.1 ORF44474 - 0.0099 15.8 1.0 0.024 14.6 1.0 1.7 1 0 0 1 1 1 1 Tumor necrosis factor receptor member 16 trans-membrane domain PDZ_1 PF12812.7 ORF44250 - 0.099 12.7 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 PDZ-like domain ATP_synt_H PF05493.13 ORF43635 - 8.1e-19 67.8 0.3 1e-18 67.5 0.3 1.2 1 0 0 1 1 1 1 ATP synthase subunit H DUF4199 PF13858.6 ORF43635 - 0.00036 21.0 0.0 0.0004 20.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4199) DUF1129 PF06570.11 ORF43635 - 0.0019 17.7 0.1 0.0021 17.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) LapA_dom PF06305.11 ORF43635 - 0.0019 18.0 1.3 0.0097 15.7 0.0 2.0 1 1 1 2 2 2 1 Lipopolysaccharide assembly protein A domain Spore_YhaL PF14147.6 ORF43635 - 0.0021 17.7 0.3 0.023 14.4 0.0 2.2 2 0 0 2 2 2 1 Sporulation protein YhaL DUF3169 PF11368.8 ORF43635 - 0.0031 17.1 0.1 0.0037 16.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3169) DER1 PF04511.15 ORF43635 - 0.0089 16.0 0.1 0.01 15.8 0.1 1.1 1 0 0 1 1 1 1 Der1-like family 7tm_3 PF00003.22 ORF43635 - 0.01 15.6 0.4 0.012 15.4 0.4 1.0 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR TMEM171 PF15471.6 ORF43635 - 0.012 14.6 2.4 0.11 11.5 0.0 2.0 1 1 1 2 2 2 0 Transmembrane protein family 171 DHHC PF01529.20 ORF43635 - 0.018 15.2 0.2 0.02 15.0 0.2 1.0 1 0 0 1 1 1 0 DHHC palmitoyltransferase MFS_2 PF13347.6 ORF43635 - 0.019 13.5 0.1 0.02 13.4 0.1 1.0 1 0 0 1 1 1 0 MFS/sugar transport protein DUF1295 PF06966.12 ORF43635 - 0.025 14.1 0.1 0.03 13.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1295) DUF2681 PF10883.8 ORF43635 - 0.054 13.9 0.0 0.073 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) DUF4083 PF13314.6 ORF43635 - 0.11 12.5 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Tetraspanin PF00335.20 ORF43635 - 0.23 11.2 2.1 0.27 10.9 2.1 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF4212 PF13937.6 ORF43635 - 0.37 11.2 4.7 6.2 7.3 4.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4212) DUF4525 PF15027.6 ORF43635 - 0.44 10.3 1.9 6.5 6.5 0.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4525) DUF4234 PF14018.6 ORF43635 - 1.1 9.5 4.4 1.6 8.9 0.3 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4234) DUF3341 PF11821.8 ORF43635 - 4.3 7.0 5.7 2.2 7.9 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3341) p47_phox_C PF08944.11 ORF43392 - 0.092 12.2 1.2 0.18 11.3 0.2 1.9 2 0 0 2 2 2 0 NADPH oxidase subunit p47Phox, C terminal domain DUF3450 PF11932.8 ORF42620 - 0.28 10.5 0.0 0.34 10.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) GalKase_gal_bdg PF10509.9 ORF40459 - 0.08 12.5 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Galactokinase galactose-binding signature PEX11 PF05648.14 ORF39480 - 3.1e-06 26.8 0.0 3.6e-06 26.6 0.0 1.0 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) Goodbye PF17109.5 ORF39480 - 0.084 13.3 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 fungal STAND N-terminal Goodbye domain zf-trcl PF13451.6 ORF38436 - 0.13 12.2 1.1 0.21 11.5 1.1 1.4 1 0 0 1 1 1 0 Probable zinc-ribbon domain COX7B PF05392.11 ORF38405 - 0.015 15.0 0.0 0.02 14.6 0.0 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase chain VIIB zf-RING_5 PF14634.6 ORF37699 - 0.055 13.4 11.6 0.11 12.5 10.2 2.0 2 0 0 2 2 2 0 zinc-RING finger domain Nod1 PF17114.5 ORF37154 - 0.024 14.8 0.9 0.029 14.5 0.9 1.1 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 IZUMO PF15005.6 ORF36966 - 0.017 15.6 1.3 0.019 15.5 1.3 1.1 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated COX7B PF05392.11 ORF36625 - 0.015 15.0 0.0 0.02 14.6 0.0 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase chain VIIB Bud13 PF09736.9 ORF36602 - 1.4 9.3 14.9 1.6 9.1 14.9 1.0 1 0 0 1 1 1 0 Pre-mRNA-splicing factor of RES complex zf-C4_Topoisom PF01396.19 ORF365 - 1.2 9.0 7.0 12 5.8 1.9 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger ArfGap PF01412.18 ORF36411 - 0.26 11.4 0.9 0.36 10.9 0.9 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Bac_rhamnosid6H PF17389.2 ORF35783 - 0.042 13.1 0.0 0.048 12.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain BLOC1_2 PF10046.9 ORF35762 - 0.0007 19.8 4.0 0.00088 19.5 4.0 1.1 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Phage_GP20 PF06810.11 ORF35762 - 0.0072 16.1 7.2 0.17 11.7 7.7 1.9 1 1 1 2 2 2 2 Phage minor structural protein GP20 DUF16 PF01519.16 ORF35762 - 0.011 16.2 3.6 0.014 15.9 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 TACC_C PF05010.14 ORF35762 - 0.011 15.5 6.5 0.049 13.4 6.5 1.7 1 1 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Spc7 PF08317.11 ORF35762 - 0.013 14.4 4.2 0.014 14.3 4.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF3523 PF12037.8 ORF35762 - 0.014 14.8 2.9 0.017 14.5 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3523) Mt_ATP-synt_D PF05873.12 ORF35762 - 0.023 14.6 2.8 0.026 14.4 2.8 1.1 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) Endotoxin_N PF03945.14 ORF35762 - 0.025 14.3 2.2 0.03 14.0 2.2 1.1 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain Nbl1_Borealin_N PF10444.9 ORF35762 - 0.041 13.5 1.5 0.073 12.7 1.5 1.6 1 1 0 1 1 1 0 Nbl1 / Borealin N terminal Med4 PF10018.9 ORF35762 - 0.042 13.5 2.7 0.049 13.3 2.7 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DUF641 PF04859.12 ORF35762 - 0.046 14.0 4.2 0.064 13.6 4.2 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Rad50_zn_hook PF04423.14 ORF35762 - 0.062 13.1 1.3 1.6 8.7 0.1 2.6 2 1 0 2 2 2 0 Rad50 zinc hook motif DUF5082 PF16888.5 ORF35762 - 0.067 13.5 6.3 0.048 13.9 2.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) SpmSyn_N PF17950.1 ORF35762 - 0.082 13.1 1.0 0.11 12.6 0.6 1.5 1 1 0 1 1 1 0 S-adenosylmethionine decarboxylase N -terminal Fzo_mitofusin PF04799.13 ORF35762 - 0.087 12.4 3.1 0.1 12.1 3.1 1.1 1 0 0 1 1 1 0 fzo-like conserved region DUF3560 PF12083.8 ORF35762 - 0.11 12.6 2.9 0.13 12.4 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3560) G_path_suppress PF15991.5 ORF35762 - 0.12 12.5 4.6 0.14 12.2 4.6 1.0 1 0 0 1 1 1 0 G-protein pathway suppressor DUF2911 PF11138.8 ORF35762 - 0.12 12.2 1.2 0.15 11.9 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2911) TPR_MLP1_2 PF07926.12 ORF35762 - 0.13 12.4 6.4 0.16 12.1 6.4 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF5345 PF17280.2 ORF35762 - 0.31 11.0 2.1 5.9 7.0 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5345) XhlA PF10779.9 ORF35762 - 1.7 8.9 9.0 13 6.1 2.7 2.3 1 1 1 2 2 2 0 Haemolysin XhlA KAR9 PF08580.10 ORF35714 - 0.057 12.0 6.8 0.055 12.0 6.8 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 MgsA_C PF12002.8 ORF35714 - 0.096 12.6 0.2 0.11 12.5 0.2 1.1 1 0 0 1 1 1 0 MgsA AAA+ ATPase C terminal NUDE_C PF04880.13 ORF35714 - 2.8 8.4 7.7 3.2 8.2 7.7 1.1 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Trp_oprn_chp PF09534.10 ORF3545 - 0.07 12.9 1.9 0.089 12.6 1.9 1.3 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) PIN_11 PF18479.1 ORF34995 - 0.031 14.5 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 PIN like domain EBA-175_VI PF11556.8 ORF34995 - 0.083 13.2 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 DUF3079 PF11278.8 ORF34957 - 0.041 13.7 0.4 0.076 12.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3079) DUF5357 PF17310.2 ORF33858 - 0.023 13.3 0.9 0.025 13.2 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5357) DUF2515 PF10720.9 ORF32694 - 0.028 13.6 0.1 0.029 13.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2515) Ada_Zn_binding PF02805.16 ORF31977 - 4.3 7.5 8.4 3.6 7.7 1.6 2.2 1 1 1 2 2 2 0 Metal binding domain of Ada Cyt_bd_oxida_I PF01654.17 ORF31928 - 0.015 13.9 4.7 0.016 13.8 4.7 1.0 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit I B12D PF06522.11 ORF31488 - 0.14 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit DUF2599 PF10783.9 ORF31276 - 0.018 15.7 0.1 0.024 15.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2599) V_ATPase_I PF01496.19 ORF30736 - 0.051 11.5 5.5 0.052 11.5 5.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Pullulanase_Ins PF18494.1 ORF30460 - 0.039 14.4 0.2 0.057 13.9 0.2 1.2 1 0 0 1 1 1 0 Pullulanase Ins domain DA1-like PF12315.8 ORF30255 - 0.097 12.0 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein DA1 Xan_ur_permease PF00860.20 ORF28998 - 0.044 12.5 0.0 0.051 12.3 0.0 1.0 1 0 0 1 1 1 0 Permease family PRAI PF00697.22 ORF28261 - 0.047 13.5 0.1 0.048 13.4 0.1 1.2 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Tmemb_9 PF05434.11 ORF27930 - 0.058 13.3 0.0 0.074 13.0 0.0 1.1 1 0 0 1 1 1 0 TMEM9 FHIPEP PF00771.20 ORF27632 - 1.4 7.3 3.6 1.7 7.0 3.6 1.0 1 0 0 1 1 1 0 FHIPEP family CNOT1_HEAT_N PF16419.5 ORF27478 - 0.15 11.8 0.3 0.16 11.6 0.3 1.0 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat LDcluster4 PF18306.1 ORF27084 - 0.057 13.0 0.1 0.06 12.9 0.1 1.1 1 0 0 1 1 1 0 SLOG cluster4 family Herpes_UL49_5 PF05702.11 ORF26877 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein PSI PF01437.25 ORF26455 - 0.00037 21.0 2.8 0.012 16.1 0.1 2.2 2 0 0 2 2 2 2 Plexin repeat DUF2515 PF10720.9 ORF26222 - 0.028 13.6 0.1 0.029 13.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2515) YukD PF08817.10 ORF26098 - 0.0081 16.8 0.0 0.012 16.3 0.0 1.3 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukD TonB_dep_Rec PF00593.24 ORF2552 - 4.4e-08 33.4 0.2 4.9e-08 33.3 0.2 1.0 1 0 0 1 1 1 1 TonB dependent receptor UPF0515 PF15135.6 ORF24725 - 0.015 14.7 2.1 0.018 14.4 2.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 Bac_rhamnosid6H PF17389.2 ORF24379 - 0.042 13.1 0.0 0.048 12.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain BT1 PF03092.16 ORF237 - 0.0033 15.7 0.0 0.0036 15.6 0.0 1.0 1 0 0 1 1 1 1 BT1 family DUF1772 PF08592.11 ORF237 - 0.027 14.8 0.0 0.028 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) APOBEC3 PF18771.1 ORF23446 - 0.12 12.5 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 APOBEC3 ASRT PF07100.11 ORF22817 - 0.025 14.6 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Anabaena sensory rhodopsin transducer Moulting_cycle PF04870.16 ORF21956 - 0.025 13.9 2.9 0.025 13.8 2.9 1.0 1 0 0 1 1 1 0 Moulting cycle Phage_clamp_A PF16790.5 ORF21956 - 0.064 13.7 0.1 0.07 13.6 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage clamp loader A subunit Cupin_8 PF13621.6 ORF2178 - 0.042 13.6 0.2 0.042 13.5 0.2 1.2 1 0 0 1 1 1 0 Cupin-like domain Helicase_C_4 PF13871.6 ORF21116 - 0.21 11.2 0.0 0.25 11.0 0.0 1.0 1 0 0 1 1 1 0 C-terminal domain on Strawberry notch homologue zf-Tim10_DDP PF02953.15 ORF20279 - 3.5e-08 33.0 1.6 4.7e-08 32.6 1.6 1.2 1 0 0 1 1 1 1 Tim10/DDP family zinc finger DUF842 PF05811.13 ORF20279 - 0.001 18.8 0.6 0.0012 18.6 0.6 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF842) PHD PF00628.29 ORF20180 - 0.011 15.6 4.5 0.011 15.6 4.5 2.2 1 1 1 2 2 2 0 PHD-finger zf-RING-like PF08746.11 ORF20180 - 7.3 7.0 15.6 0.78 10.1 4.7 2.1 1 1 1 2 2 2 0 RING-like domain SBF PF01758.16 ORF1960 - 0.15 11.7 1.8 0.18 11.4 1.8 1.2 1 0 0 1 1 1 0 Sodium Bile acid symporter family E_Pc_C PF06752.12 ORF19397 - 0.11 12.6 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 Enhancer of Polycomb C-terminus DUF3938 PF13074.6 ORF19009 - 0.011 15.9 0.3 0.013 15.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3938) Pullulanase_Ins PF18494.1 ORF18973 - 0.039 14.4 0.2 0.057 13.9 0.2 1.2 1 0 0 1 1 1 0 Pullulanase Ins domain DUF3306 PF11748.8 ORF17910 - 0.043 14.7 0.1 0.044 14.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3306) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks298.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks298.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks298.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks298.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AA_permease PF00324.21 ORF17579 - 0.18 10.4 0.1 0.2 10.2 0.1 1.0 1 0 0 1 1 1 0 Amino acid permease Herpes_UL49_5 PF05702.11 ORF16892 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein TOBE_3 PF12857.7 ORF15672 - 0.052 13.5 0.3 0.87 9.5 0.1 2.4 1 1 1 2 2 2 0 TOBE-like domain DUF3950 PF13132.6 ORF15599 - 1.3 8.8 3.5 0.81 9.5 1.1 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3950) Mu-conotoxin PF05374.12 ORF152462 - 0.07 13.2 0.8 0.07 13.2 0.8 1.7 2 0 0 2 2 2 0 Mu-Conotoxin Bac_rhamnosid6H PF17389.2 ORF152159 - 0.042 13.1 0.0 0.048 12.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Elicitin PF00964.17 ORF152105 - 0.00099 19.2 0.1 0.0012 18.9 0.1 1.3 1 0 0 1 1 1 1 Elicitin COG6 PF06419.11 ORF152105 - 0.0029 15.9 0.1 0.0033 15.7 0.1 1.0 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 SAM_2 PF07647.17 ORF152105 - 0.0038 17.3 0.2 0.0058 16.7 0.2 1.5 1 1 0 1 1 1 1 SAM domain (Sterile alpha motif) Annexin PF00191.20 ORF152105 - 0.044 13.9 1.0 0.11 12.5 0.3 1.9 2 0 0 2 2 2 0 Annexin NACHT PF05729.12 ORF152044 - 0.022 14.7 0.2 0.027 14.4 0.2 1.1 1 0 0 1 1 1 0 NACHT domain Dynein_light PF01221.18 ORF151154 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF151154 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin DUF2515 PF10720.9 ORF150903 - 0.028 13.6 0.1 0.029 13.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2515) Sec2p PF06428.11 ORF150632 - 0.048 13.6 3.8 0.1 12.6 3.8 1.5 1 1 0 1 1 1 0 GDP/GTP exchange factor Sec2p YtpI PF14007.6 ORF150140 - 0.024 14.7 3.6 0.038 14.1 3.6 1.3 1 0 0 1 1 1 0 YtpI-like protein LRS4 PF10422.9 ORF149429 - 4.3 6.8 10.4 8 5.9 10.4 1.5 1 1 0 1 1 1 0 Monopolin complex subunit LRS4 DAP10 PF07213.11 ORF14932 - 0.041 13.8 0.7 0.062 13.3 0.7 1.3 1 0 0 1 1 1 0 DAP10 membrane protein NifU PF01106.17 ORF147759 - 0.07 13.3 0.6 0.14 12.3 0.2 1.7 1 1 1 2 2 2 0 NifU-like domain RabGAP-TBC PF00566.18 ORF146711 - 1.8e-06 27.8 0.7 1.8e-06 27.8 0.7 1.6 2 0 0 2 2 2 1 Rab-GTPase-TBC domain DUF2374 PF09574.10 ORF146711 - 0.075 12.9 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (Duf2374) EGF_CA PF07645.15 ORF146017 - 0.009 16.2 0.2 0.02 15.1 0.2 1.5 1 0 0 1 1 1 1 Calcium-binding EGF domain CtIP_N PF10482.9 ORF146017 - 0.18 11.9 2.5 0.2 11.7 2.5 1.2 1 0 0 1 1 1 0 Tumour-suppressor protein CtIP N-terminal domain Uma2 PF05685.12 ORF145389 - 0.13 11.8 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Putative restriction endonuclease CDC50 PF03381.15 ORF144216 - 4.2e-17 62.6 0.5 4.8e-17 62.4 0.5 1.0 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family DcuA_DcuB PF03605.14 ORF143503 - 0.41 9.5 3.6 0.42 9.5 3.6 1.0 1 0 0 1 1 1 0 Anaerobic c4-dicarboxylate membrane transporter AAR2 PF05282.11 ORF143239 - 0.044 13.2 0.1 0.054 12.9 0.1 1.1 1 0 0 1 1 1 0 AAR2 protein Dynein_light PF01221.18 ORF141700 - 6.1e-30 103.4 0.3 6.7e-30 103.3 0.3 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 Vasohibin PF14822.6 ORF141700 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Vasohibin DUF2515 PF10720.9 ORF141524 - 0.028 13.6 0.1 0.029 13.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2515) Fimbrial PF00419.20 ORF140433 - 0.0039 17.5 0.1 0.0042 17.4 0.1 1.0 1 0 0 1 1 1 1 Fimbrial protein DUF498 PF04430.14 ORF140433 - 0.074 13.1 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) GTP_CH_N PF12471.8 ORF140433 - 0.097 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase N terminal DUF2208 PF09973.9 ORF139841 - 0.0085 15.7 0.1 0.0098 15.5 0.1 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) DUF3652 PF12372.8 ORF139287 - 0.44 10.5 3.1 13 5.8 0.0 2.7 3 0 0 3 3 3 0 Huntingtin protein region Pkinase PF00069.25 ORF138832 - 0.00026 20.5 0.0 0.00032 20.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DUF4133 PF13571.6 ORF137780 - 0.46 10.8 3.0 0.75 10.2 3.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4133) DNA_alkylation PF08713.11 ORF136479 - 0.14 11.9 2.8 0.16 11.7 2.8 1.1 1 0 0 1 1 1 0 DNA alkylation repair enzyme Herpes_UL49_5 PF05702.11 ORF136065 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein Kelch_3 PF13415.6 ORF136023 - 0.11 12.8 0.1 0.17 12.2 0.1 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain DUF2721 PF11026.8 ORF135307 - 0.17 11.8 0.1 0.2 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) VQ PF05678.14 ORF135216 - 0.13 11.8 1.5 0.28 10.7 1.5 1.5 1 0 0 1 1 1 0 VQ motif FAST_1 PF06743.15 ORF134840 - 0.19 11.7 0.0 0.27 11.2 0.0 1.3 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 1 Caps_synth PF05704.12 ORF134779 - 0.049 13.0 0.1 0.051 13.0 0.1 1.0 1 0 0 1 1 1 0 Capsular polysaccharide synthesis protein SPC12 PF06645.13 ORF134500 - 9e-21 73.7 0.3 1e-20 73.5 0.3 1.1 1 0 0 1 1 1 1 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF3270 PF11674.8 ORF134500 - 0.057 13.6 0.3 0.083 13.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) MFS_2 PF13347.6 ORF134392 - 0.13 10.8 0.1 0.15 10.6 0.1 1.1 1 0 0 1 1 1 0 MFS/sugar transport protein SapB_1 PF05184.15 ORF134392 - 0.16 12.1 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Saposin-like type B, region 1 AIMP2_LysRS_bd PF16780.5 ORF134309 - 0.062 13.0 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 AIMP2 lysyl-tRNA synthetase binding domain Herpes_UL49_5 PF05702.11 ORF132736 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein XK-related PF09815.9 ORF132111 - 0.067 12.2 5.2 0.082 12.0 5.2 1.0 1 0 0 1 1 1 0 XK-related protein BPL_LplA_LipB_2 PF16917.5 ORF131968 - 0.06 12.9 0.0 0.072 12.6 0.0 1.1 1 0 0 1 1 1 0 Biotin/lipoate A/B protein ligase family DUF3884 PF13024.6 ORF129885 - 0.1 12.2 0.3 0.16 11.5 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3884) SKA2 PF16740.5 ORF127082 - 0.0029 17.4 4.0 0.0034 17.1 4.0 1.1 1 0 0 1 1 1 1 Spindle and kinetochore-associated protein 2 SWIRM-assoc_1 PF16495.5 ORF127082 - 0.0054 16.7 2.4 0.0083 16.1 2.3 1.5 1 1 0 1 1 1 1 SWIRM-associated region 1 APG6_N PF17675.1 ORF127082 - 0.021 15.3 5.2 0.026 15.1 5.2 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF2096 PF09869.9 ORF127082 - 0.022 14.8 2.2 0.026 14.6 2.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2096) DUF5595 PF18077.1 ORF127082 - 0.026 14.6 2.3 0.026 14.6 2.3 1.8 1 1 0 2 2 2 0 Domain of unknown function (DUF5595) 5_nucleotid PF05761.14 ORF127082 - 0.043 12.7 3.0 0.048 12.5 3.0 1.0 1 0 0 1 1 1 0 5' nucleotidase family YlqD PF11068.8 ORF127082 - 0.084 13.3 7.0 0.11 12.9 7.0 1.1 1 0 0 1 1 1 0 YlqD protein Hrs_helical PF12210.8 ORF127082 - 0.16 12.5 6.2 1 10.0 1.1 2.1 1 1 1 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Fungal_trans PF04082.18 ORF127082 - 0.21 10.6 4.8 0.22 10.5 4.8 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain Tropomyosin_1 PF12718.7 ORF127082 - 0.21 11.8 7.8 0.16 12.1 6.5 1.4 1 1 1 2 2 2 0 Tropomyosin like Snapin_Pallidin PF14712.6 ORF127082 - 0.21 12.0 8.4 0.11 12.9 5.7 1.7 1 1 1 2 2 2 0 Snapin/Pallidin JIP_LZII PF16471.5 ORF127082 - 0.21 11.8 7.4 0.34 11.1 5.3 1.9 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II Nbl1_Borealin_N PF10444.9 ORF127082 - 0.25 11.0 5.1 0.1 12.2 1.6 2.0 1 1 1 2 2 2 0 Nbl1 / Borealin N terminal bZIP_1 PF00170.21 ORF127082 - 0.31 11.2 12.2 0.29 11.3 1.1 2.3 2 1 0 2 2 2 0 bZIP transcription factor DUF3450 PF11932.8 ORF127082 - 0.55 9.5 5.1 0.67 9.2 5.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1664 PF07889.12 ORF127082 - 0.79 9.8 4.3 2 8.4 0.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) FapA PF03961.13 ORF127082 - 0.8 8.2 7.1 0.9 8.1 7.1 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A YmgB PF10798.8 ORF127082 - 0.87 9.4 4.3 2.8 7.8 0.2 2.2 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR DASH_Dam1 PF08653.10 ORF127082 - 0.99 9.3 4.2 4.6 7.1 1.4 2.7 2 1 0 2 2 2 0 DASH complex subunit Dam1 DASH_Dad3 PF08656.10 ORF127082 - 4.3 7.5 7.9 7.4 6.7 3.9 2.2 1 1 1 2 2 2 0 DASH complex subunit Dad3 DUF1230 PF06799.11 ORF126704 - 0.14 12.2 3.1 0.17 12.0 3.1 1.2 1 0 0 1 1 1 0 Conserved in the green lineage and diatoms 27 Nudix_N_2 PF14803.6 ORF125570 - 0.016 15.1 3.4 0.053 13.4 0.2 2.4 2 0 0 2 2 2 0 Nudix N-terminal SH3_10 PF17902.1 ORF124957 - 0.029 14.4 0.0 0.038 14.0 0.0 1.2 1 0 0 1 1 1 0 SH3 domain Cys_Knot_tox PF17486.2 ORF124528 - 0.016 15.4 0.4 0.032 14.4 0.1 1.6 1 1 1 2 2 2 0 Cystine knot toxins LPG_synthase_TM PF03706.13 ORF124496 - 0.056 13.0 0.4 0.062 12.8 0.4 1.0 1 0 0 1 1 1 0 Lysylphosphatidylglycerol synthase TM region Fer4_2 PF12797.7 ORF124303 - 0.017 15.2 2.6 0.042 13.9 2.6 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain PNRC PF15365.6 ORF123695 - 0.13 12.1 0.2 0.13 12.1 0.2 2.2 3 0 0 3 3 3 0 Proline-rich nuclear receptor coactivator motif LidA_Long_CC PF18641.1 ORF12349 - 0.032 14.3 0.1 0.043 13.9 0.1 1.1 1 0 0 1 1 1 0 LidA long coiled-coil domain DUF1315 PF07023.12 ORF123096 - 0.1 12.7 0.6 0.13 12.4 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1315) Bac_rhamnosid6H PF17389.2 ORF121499 - 0.042 13.1 0.0 0.048 12.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain PGF-CTERM PF18204.1 ORF12056 - 4.5 7.4 8.6 10 6.2 0.3 2.2 2 0 0 2 2 2 0 PGF-CTERM motif Ribosomal_S21 PF01165.20 ORF119776 - 0.055 13.2 0.0 0.059 13.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S21 LPG_synthase_TM PF03706.13 ORF118944 - 0.056 13.0 0.4 0.062 12.8 0.4 1.0 1 0 0 1 1 1 0 Lysylphosphatidylglycerol synthase TM region UPF0227 PF05728.12 ORF118709 - 0.13 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) PSCyt2 PF07583.11 ORF117152 - 0.057 13.3 0.0 0.31 11.0 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1549) DUF4400 PF14348.6 ORF116444 - 0.21 11.1 2.0 0.25 10.8 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) Vanabin-2 PF11437.8 ORF114397 - 0.23 11.6 12.8 0.27 11.4 12.8 1.1 1 0 0 1 1 1 0 Vanadium-binding protein 2 DUF4529 PF15032.6 ORF114164 - 0.017 14.3 0.1 0.018 14.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) IL3Ra_N PF18611.1 ORF114050 - 0.11 12.5 2.0 9.2 6.3 0.1 2.2 2 0 0 2 2 2 0 IL-3 receptor alpha chain N-terminal domain Ndc1_Nup PF09531.10 ORF11369 - 9.4 4.8 9.7 9.9 4.7 9.7 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Enkurin PF13864.6 ORF11341 - 1.3e-16 60.8 10.1 1.6e-16 60.5 10.1 1.1 1 0 0 1 1 1 1 Calmodulin-binding Inovirus_Gp2 PF11726.8 ORF11341 - 0.019 14.9 0.2 0.021 14.8 0.2 1.0 1 0 0 1 1 1 0 Inovirus Gp2 Synaphin PF05835.12 ORF11341 - 0.021 15.1 5.8 0.023 15.0 5.8 1.0 1 0 0 1 1 1 0 Synaphin protein DUF1572 PF07609.11 ORF11341 - 0.029 14.2 0.7 0.034 13.9 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) Holin_BhlA PF10960.8 ORF11341 - 0.1 12.6 6.5 3.6 7.6 1.9 2.2 2 0 0 2 2 2 0 BhlA holin family DUF2968 PF11180.8 ORF11341 - 0.14 11.8 4.3 0.18 11.4 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Cep57_MT_bd PF06657.13 ORF11341 - 0.17 12.4 4.7 0.19 12.2 4.0 1.4 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 Vfa1 PF08432.10 ORF113187 - 0.005 17.2 0.9 0.0067 16.8 0.9 1.2 1 0 0 1 1 1 1 AAA-ATPase Vps4-associated protein 1 Ribonuc_L-PSP PF01042.21 ORF112248 - 1.3e-15 57.4 0.0 1.5e-15 57.3 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP CD52 PF15116.6 ORF112248 - 0.025 14.6 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 CAMPATH-1 antigen Pex24p PF06398.11 ORF110908 - 2.3 7.1 9.3 2.5 7.0 9.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin CAAX_1 PF15895.5 ORF110459 - 0.15 11.9 6.7 0.17 11.7 6.7 1.2 1 0 0 1 1 1 0 CAAX box cerebral protein 1 Conotoxin PF02950.17 ORF110459 - 1.2 10.2 5.2 0.74 10.9 3.6 1.5 1 1 0 1 1 1 0 Conotoxin CbiK PF06180.11 ORF110438 - 0.084 12.2 0.0 0.099 11.9 0.0 1.1 1 0 0 1 1 1 0 Cobalt chelatase (CbiK) Bac_DNA_binding PF00216.21 ORF110119 - 3.9e-33 113.5 1.5 4.3e-33 113.4 1.5 1.0 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 ORF110119 - 3.5e-08 33.6 0.1 3.7e-08 33.5 0.1 1.0 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 ORF110119 - 6.3e-06 26.0 0.1 8.6e-06 25.5 0.1 1.1 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 ORF110119 - 0.0014 18.8 0.0 0.002 18.3 0.0 1.2 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 ORF110119 - 0.0027 17.8 0.0 0.003 17.7 0.0 1.1 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 DUF2267 PF10025.9 ORF110119 - 0.055 13.7 0.2 0.085 13.1 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) NA37 PF04245.13 ORF110119 - 0.075 12.5 0.1 0.076 12.5 0.1 1.1 1 0 0 1 1 1 0 37-kD nucleoid-associated bacterial protein Guanylin PF02058.15 ORF110007 - 0.085 13.3 0.1 0.1 13.1 0.1 1.2 1 0 0 1 1 1 0 Guanylin precursor zf-RING_2 PF13639.6 ORF108931 - 1.3e-08 35.0 9.9 1.7e-08 34.7 9.9 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF108931 - 2.7e-07 30.2 4.8 2.7e-07 30.2 4.8 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF108931 - 5.3e-06 26.4 0.5 8.7e-06 25.7 0.6 1.4 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF108931 - 0.00015 21.5 9.6 0.00019 21.2 9.6 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF108931 - 0.00038 20.7 9.0 0.00093 19.4 9.0 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF108931 - 0.0007 19.5 11.1 0.00098 19.0 11.1 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF108931 - 0.0013 18.5 10.6 0.002 17.9 10.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF108931 - 0.011 15.3 3.8 0.011 15.3 3.8 2.1 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF108931 - 0.016 15.1 4.8 0.016 15.1 4.8 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4 PF00097.25 ORF108931 - 0.022 14.7 12.5 0.032 14.1 12.5 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF108931 - 0.32 11.1 6.0 1.2 9.2 6.0 1.9 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger PHD PF00628.29 ORF108931 - 0.98 9.4 11.9 2.2 8.2 11.9 1.7 1 1 0 1 1 1 0 PHD-finger Elicitin PF00964.17 ORF108307 - 0.00099 19.2 0.1 0.0012 18.9 0.1 1.3 1 0 0 1 1 1 1 Elicitin COG6 PF06419.11 ORF108307 - 0.0029 15.9 0.1 0.0033 15.7 0.1 1.0 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 SAM_2 PF07647.17 ORF108307 - 0.0038 17.3 0.2 0.0058 16.7 0.2 1.5 1 1 0 1 1 1 1 SAM domain (Sterile alpha motif) Annexin PF00191.20 ORF108307 - 0.044 13.9 1.0 0.11 12.5 0.3 1.9 2 0 0 2 2 2 0 Annexin Pyr_redox_2 PF07992.14 ORF108165 - 3.2e-08 33.2 0.1 3.6e-08 33.0 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GWT1 PF06423.12 ORF107665 - 0.02 15.0 0.4 0.023 14.8 0.4 1.1 1 0 0 1 1 1 0 GWT1 oligo_HPY PF08352.12 ORF107005 - 0.2 12.2 2.4 0.21 12.1 1.7 1.5 1 1 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region Herpes_UL49_5 PF05702.11 ORF106682 - 0.048 13.7 5.2 0.062 13.4 5.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein Sulfotransfer_4 PF17784.1 ORF106333 - 4.6e-15 56.0 0.3 6e-15 55.7 0.3 1.2 1 0 0 1 1 1 1 Sulfotransferase domain Trep_Strep PF09605.10 ORF106290 - 0.23 11.4 6.5 0.25 11.3 6.5 1.0 1 0 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) SLY PF12485.8 ORF105491 - 0.12 13.1 15.7 0.16 12.7 15.7 1.2 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein TMEM71 PF15121.6 ORF105314 - 0.0085 15.8 0.2 0.01 15.5 0.2 1.3 1 1 0 1 1 1 1 TMEM71 protein family zf-RING_4 PF14570.6 ORF105216 - 0.034 13.9 4.0 0.08 12.8 1.5 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain DUF2515 PF10720.9 ORF104737 - 0.028 13.6 0.1 0.029 13.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2515) Polyoma_agno PF01736.16 ORF104646 - 0.41 10.4 0.3 0.41 10.4 0.3 1.9 2 0 0 2 2 2 0 Polyomavirus agnoprotein DUF2515 PF10720.9 ORF104256 - 0.028 13.6 0.1 0.029 13.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2515) PDDEXK_10 PF07788.11 ORF104166 - 0.024 14.5 0.3 0.035 14.0 0.3 1.2 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily DUF816 PF05674.12 ORF103807 - 0.014 15.3 0.4 0.015 15.2 0.4 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF816) TrkH PF02386.16 ORF103158 - 1.8e-21 76.2 9.3 1.9e-21 76.1 9.3 1.0 1 0 0 1 1 1 1 Cation transport protein Argos PF11581.8 ORF103071 - 0.16 12.0 7.2 2 8.4 1.5 2.0 1 1 1 2 2 2 0 Antagonist of EGFR signalling, Argos MPS2 PF17060.5 ORF10236 - 0.037 13.3 1.3 0.037 13.3 1.3 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 ATP-synt_DE PF00401.20 ORF101953 - 3.9e-14 52.6 6.2 5e-14 52.3 6.2 1.2 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ATP-synt_DE_N PF02823.16 ORF101953 - 3e-09 36.7 0.0 5.4e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GnsAB_toxin PF08178.11 ORF101953 - 0.95 9.4 3.4 3.6 7.6 0.5 2.2 2 0 0 2 2 2 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system YhfH PF14149.6 ORF101664 - 0.95 9.5 7.9 0.27 11.2 4.6 1.8 2 0 0 2 2 2 0 YhfH-like protein ATP-grasp PF02222.22 ORF101302 - 0.23 11.0 0.0 0.28 10.8 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain TILa PF12714.7 ORF100411 - 0.17 11.8 5.7 4.1 7.4 0.3 2.2 1 1 1 2 2 2 0 TILa domain Rhomboid_SP PF12595.8 NODE_61723_length_265_cov_0.921739_g53783_i0reverse_frame_1 - 0.039 13.3 0.8 0.053 12.9 0.8 1.1 1 0 0 1 1 1 0 Rhomboid serine protease UPF0492 PF15744.5 NODE_61722_length_265_cov_0.926087_g53782_i0reverse_frame_1 - 0.092 11.9 0.2 0.095 11.9 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0492 YjcB PF15940.5 NODE_61717_length_265_cov_1.060870_g53777_i0reverse_frame_1 - 0.023 14.9 2.9 0.029 14.5 2.9 1.2 1 0 0 1 1 1 0 Family of unknown function ATP-synt PF00231.19 NODE_61707_length_265_cov_1.204348_g53767_i0forward_frame_1 - 1.4e-28 100.4 1.7 1.6e-28 100.3 1.7 1.0 1 0 0 1 1 1 1 ATP synthase BLOC1_2 PF10046.9 NODE_61707_length_265_cov_1.204348_g53767_i0forward_frame_1 - 0.028 14.7 0.1 0.036 14.4 0.1 1.3 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF2826 PF11442.8 NODE_61704_length_265_cov_1.213043_g53764_i0reverse_frame_1 - 0.082 12.7 0.1 0.092 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2826) SHR3_chaperone PF08229.11 NODE_61700_length_265_cov_1.295652_g53760_i0forward_frame_1 - 0.15 11.1 1.7 0.18 10.8 1.7 1.3 1 0 0 1 1 1 0 ER membrane protein SH3 DDE_Tnp_1_4 PF13701.6 NODE_61699_length_265_cov_1.308696_g53759_i0reverse_frame_1 - 0.0085 14.4 0.9 0.0095 14.2 0.9 1.0 1 0 0 1 1 1 1 Transposase DDE domain group 1 PsbL PF02419.17 NODE_61699_length_265_cov_1.308696_g53759_i0forward_frame_1 - 7.3 6.7 8.3 33 4.6 0.6 3.1 3 0 0 3 3 3 0 PsbL protein Chitin_bind_1 PF00187.19 NODE_61694_length_265_cov_1.373913_g53754_i0forward_frame_1 - 0.0057 17.1 5.6 0.011 16.1 5.6 1.6 1 1 0 1 1 1 1 Chitin recognition protein Competence PF03772.16 NODE_61691_length_265_cov_1.382609_g53751_i0reverse_frame_1 - 0.065 12.5 8.1 0.069 12.4 8.1 1.0 1 0 0 1 1 1 0 Competence protein FAM216B PF15107.6 NODE_61689_length_265_cov_1.386957_g53749_i0reverse_frame_1 - 0.012 15.5 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 FAM216B protein family Sel1 PF08238.12 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 2.9e-13 50.0 1.1 1.9e-08 34.7 0.4 2.2 2 0 0 2 2 2 2 Sel1 repeat TPR_1 PF00515.28 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 4.6e-05 23.0 4.1 1.5 8.8 0.0 3.6 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.0019 18.1 0.1 0.69 10.1 0.0 2.5 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.003 17.5 2.4 12 6.3 0.1 3.4 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.012 16.2 0.3 0.096 13.4 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.017 15.2 0.2 0.79 9.8 0.1 2.5 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain TPR_8 PF13181.6 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_1 - 0.044 14.0 6.7 4 7.9 3.6 3.2 2 1 0 2 2 2 0 Tetratricopeptide repeat GerA PF03323.13 NODE_61683_length_265_cov_1.447826_g53743_i0reverse_frame_1 - 0.032 12.7 1.1 0.034 12.6 1.1 1.0 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein Porin_1 PF00267.21 NODE_61680_length_265_cov_1.517391_g53740_i0reverse_frame_1 - 2.3e-24 86.5 1.0 2.6e-24 86.3 1.0 1.0 1 0 0 1 1 1 1 Gram-negative porin Dabb PF07876.12 NODE_61680_length_265_cov_1.517391_g53740_i0forward_frame_1 - 0.043 14.4 0.1 0.046 14.3 0.1 1.1 1 0 0 1 1 1 0 Stress responsive A/B Barrel Domain DUF3435 PF11917.8 NODE_61672_length_265_cov_1.734783_g53732_i0reverse_frame_1 - 0.016 14.2 1.8 0.018 14.0 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) DnaJ PF00226.31 NODE_61672_length_265_cov_1.734783_g53732_i0forward_frame_1 - 7.7e-11 42.0 1.7 1e-10 41.6 1.7 1.1 1 0 0 1 1 1 1 DnaJ domain DDE_Tnp_ISL3 PF01610.17 NODE_61669_length_265_cov_1.765217_g53729_i0reverse_frame_1 - 0.22 11.2 0.1 0.26 10.9 0.1 1.1 1 0 0 1 1 1 0 Transposase DUF1189 PF06691.11 NODE_61669_length_265_cov_1.765217_g53729_i0forward_frame_1 - 0.01 15.4 6.5 0.011 15.3 6.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) FixQ PF05545.11 NODE_61669_length_265_cov_1.765217_g53729_i0forward_frame_1 - 2.6 8.1 5.9 3.9 7.5 5.9 1.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ RTT107_BRCT_6 PF16771.5 NODE_61658_length_265_cov_1.908696_g53718_i0forward_frame_1 - 0.064 13.4 1.1 0.071 13.3 1.1 1.2 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain SR-25 PF10500.9 NODE_61654_length_265_cov_1.991304_g53714_i0forward_frame_1 - 7 6.2 12.2 8.7 5.9 11.9 1.3 1 1 0 1 1 1 0 Nuclear RNA-splicing-associated protein TBPIP PF07106.13 NODE_61649_length_265_cov_2.113043_g53709_i0reverse_frame_1 - 0.078 12.9 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain YqbF PF14553.6 NODE_61648_length_265_cov_2.204348_g53708_i0reverse_frame_1 - 0.066 13.1 0.0 0.092 12.6 0.0 1.2 1 0 0 1 1 1 0 YqbF, hypothetical protein domain HisKA PF00512.25 NODE_61647_length_265_cov_2.213043_g53707_i0reverse_frame_1 - 2.4e-08 33.9 0.3 4.9e-08 32.9 0.2 1.5 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 NODE_61647_length_265_cov_2.213043_g53707_i0reverse_frame_1 - 0.0083 16.5 0.0 0.035 14.5 0.0 2.0 2 0 0 2 2 2 1 HAMP domain DUF643 PF04867.12 NODE_61647_length_265_cov_2.213043_g53707_i0reverse_frame_1 - 0.022 15.4 0.0 0.03 14.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF643) T7SS_ESX_EspC PF10824.8 NODE_61647_length_265_cov_2.213043_g53707_i0reverse_frame_1 - 0.041 14.3 0.1 3 8.4 0.0 2.0 2 0 0 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm F-box-like_2 PF13013.6 NODE_61647_length_265_cov_2.213043_g53707_i0forward_frame_1 - 0.1 12.5 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 F-box-like domain Peptidase_C26 PF07722.13 NODE_61645_length_265_cov_2.334783_g53705_i0forward_frame_1 - 1.6e-18 67.3 0.1 2.1e-18 66.9 0.1 1.2 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 NODE_61645_length_265_cov_2.334783_g53705_i0forward_frame_1 - 6e-05 22.9 0.0 7e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I DUF977 PF06163.11 NODE_61644_length_265_cov_2.378261_g53704_i0reverse_frame_1 - 1.1e-11 44.7 0.1 1.3e-11 44.6 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF977) CbiN PF02553.15 NODE_61644_length_265_cov_2.378261_g53704_i0forward_frame_1 - 0.14 12.1 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Cobalt transport protein component CbiN DUF4006 PF13179.6 NODE_61642_length_265_cov_2.456522_g53702_i0forward_frame_1 - 0.14 12.1 1.6 0.18 11.7 1.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF4006) DUF5090 PF17009.5 NODE_61642_length_265_cov_2.456522_g53702_i0forward_frame_1 - 0.81 9.6 6.1 0.91 9.5 6.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Phage_antitermQ PF06530.12 NODE_61638_length_265_cov_2.547826_g53698_i0reverse_frame_1 - 0.0095 15.8 0.2 0.01 15.8 0.2 1.2 1 0 0 1 1 1 1 Phage antitermination protein Q GerD PF17898.1 NODE_61638_length_265_cov_2.547826_g53698_i0reverse_frame_1 - 0.011 15.6 1.0 0.012 15.5 1.0 1.1 1 0 0 1 1 1 0 Spore germination GerD central core domain SWIM PF04434.17 NODE_61635_length_265_cov_2.600000_g53695_i0reverse_frame_1 - 0.024 14.3 0.2 0.033 13.9 0.2 1.4 1 0 0 1 1 1 0 SWIM zinc finger Peptidase_M24 PF00557.24 NODE_61633_length_265_cov_2.613043_g53693_i0reverse_frame_1 - 0.0051 16.5 0.0 0.0065 16.2 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 COX2 PF00116.20 NODE_61633_length_265_cov_2.613043_g53693_i0forward_frame_1 - 0.093 12.6 0.4 0.12 12.3 0.4 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, periplasmic domain TPP_enzyme_N PF02776.18 NODE_61628_length_265_cov_2.713043_g53688_i0reverse_frame_1 - 1.2e-16 60.8 0.1 1.4e-16 60.6 0.1 1.0 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPAP3_C PF13877.6 NODE_61624_length_265_cov_2.908696_g53684_i0forward_frame_1 - 0.042 14.4 0.1 0.058 13.9 0.1 1.3 1 0 0 1 1 1 0 Potential Monad-binding region of RPAP3 RnaseA PF00074.20 NODE_61622_length_265_cov_3.291304_g53682_i0reverse_frame_1 - 0.026 15.0 4.2 0.032 14.7 4.2 1.1 1 0 0 1 1 1 0 Pancreatic ribonuclease Glyco_transf_9 PF01075.17 NODE_61621_length_265_cov_3.421739_g53681_i0forward_frame_1 - 2.1e-07 30.5 0.0 2.3e-07 30.4 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) DUF5580 PF17743.1 NODE_61621_length_265_cov_3.421739_g53681_i0forward_frame_1 - 0.19 10.2 0.0 0.23 9.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5580) DUF3969 PF13108.6 NODE_61619_length_265_cov_3.991304_g53679_i0reverse_frame_1 - 0.057 13.4 0.0 0.074 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3969) Exo_endo_phos PF03372.23 NODE_61616_length_265_cov_4.513043_g53676_i0forward_frame_1 - 0.0096 15.5 0.0 0.0096 15.5 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_61616_length_265_cov_4.513043_g53676_i0forward_frame_1 - 0.12 12.2 0.0 0.16 11.8 0.0 1.3 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase Cas_Csx8 PF09657.10 NODE_61604_length_265_cov_39.743478_g53664_i0forward_frame_1 - 0.0099 14.9 3.4 0.011 14.8 3.4 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Csx8 (Cas_Csx8) DUF5305 PF17231.2 NODE_61604_length_265_cov_39.743478_g53664_i0forward_frame_1 - 0.036 13.5 0.4 0.039 13.4 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) OAD_gamma PF04277.13 NODE_61604_length_265_cov_39.743478_g53664_i0forward_frame_1 - 0.36 11.4 2.8 0.67 10.6 2.8 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain PRIMA1 PF16101.5 NODE_61602_length_265_cov_44.173913_g53662_i0forward_frame_1 - 0.079 13.0 1.7 0.094 12.8 1.7 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_61602_length_265_cov_44.173913_g53662_i0forward_frame_1 - 0.089 12.3 0.4 0.1 12.1 0.4 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Glycophorin_A PF01102.18 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.001 19.3 0.0 0.0011 19.1 0.0 1.1 1 0 0 1 1 1 1 Glycophorin A VSP PF03302.13 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.0046 15.9 0.4 0.0047 15.8 0.4 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein Mucin15 PF15672.5 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.0053 16.3 0.2 0.0064 16.0 0.2 1.1 1 0 0 1 1 1 1 Cell-membrane associated Mucin15 CD99L2 PF12301.8 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.016 15.5 0.1 0.017 15.4 0.1 1.1 1 0 0 1 1 1 0 CD99 antigen like protein 2 Amnionless PF14828.6 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.038 12.8 0.0 0.038 12.8 0.0 1.0 1 0 0 1 1 1 0 Amnionless DUF4690 PF15756.5 NODE_61588_length_265_cov_76.573913_g53648_i0forward_frame_1 - 0.099 13.3 0.1 0.13 12.9 0.1 1.2 1 0 0 1 1 1 0 Small Novel Rich in Cartilage Cnn_1N PF07989.11 NODE_61586_length_265_cov_85.526087_g53646_i0reverse_frame_1 - 0.11 12.7 0.0 0.21 11.8 0.0 1.6 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 Leu_Phe_trans PF03588.14 NODE_61582_length_265_cov_91.065217_g53642_i0forward_frame_1 - 0.025 14.1 0.3 0.025 14.1 0.3 1.0 1 0 0 1 1 1 0 Leucyl/phenylalanyl-tRNA protein transferase Folate_rec PF03024.14 NODE_61581_length_265_cov_93.834783_g53641_i0forward_frame_1 - 0.0024 17.8 3.1 0.0026 17.6 3.1 1.1 1 0 0 1 1 1 1 Folate receptor family FixS PF03597.15 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.0028 17.3 0.0 0.0044 16.7 0.0 1.3 1 0 0 1 1 1 1 Cytochrome oxidase maturation protein cbb3-type MAP17 PF15807.5 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.012 15.8 0.0 0.015 15.6 0.0 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF3976 PF13121.6 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.029 14.5 0.5 0.049 13.7 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3976) 7TM_GPCR_Srd PF10317.9 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.031 13.5 0.0 0.038 13.2 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd DUF3341 PF11821.8 NODE_61573_length_265_cov_234.808696_g53633_i0reverse_frame_1 - 0.31 10.6 1.1 0.7 9.5 0.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3341) Jak1_Phl PF17887.1 NODE_61570_length_265_cov_340.230435_g53630_i0reverse_frame_1 - 0.06 13.3 0.1 0.063 13.2 0.1 1.2 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain FixS PF03597.15 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.021 14.5 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type DUF3976 PF13121.6 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.037 14.1 1.7 0.066 13.3 1.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3976) MAP17 PF15807.5 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.043 14.0 0.0 0.051 13.8 0.0 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 7TM_GPCR_Srd PF10317.9 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.062 12.5 0.0 0.075 12.2 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd Transport_MerF PF11431.8 NODE_61570_length_265_cov_340.230435_g53630_i0forward_frame_1 - 0.17 11.8 0.7 0.59 10.0 0.1 2.1 2 1 0 2 2 2 0 Membrane transport protein MerF bMG1 PF17970.1 NODE_61565_length_265_cov_532.282609_g53625_i0reverse_frame_1 - 0.082 13.0 0.0 0.098 12.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG1 domain ATPase-cat_bd PF12156.8 NODE_61565_length_265_cov_532.282609_g53625_i0forward_frame_1 - 0.081 13.7 0.1 0.1 13.3 0.1 1.2 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase Tubulin_2 PF13809.6 NODE_61557_length_266_cov_0.974026_g53617_i0forward_frame_1 - 0.18 10.9 0.0 0.24 10.5 0.0 1.1 1 0 0 1 1 1 0 Tubulin like DUF1540 PF07561.11 NODE_61551_length_266_cov_1.203463_g53611_i0forward_frame_1 - 0.091 13.1 1.5 0.21 11.9 0.1 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1540) Benyvirus_14KDa PF07255.11 NODE_61539_length_266_cov_1.393939_g53599_i0reverse_frame_1 - 0.13 12.5 2.1 0.16 12.2 1.7 1.3 1 1 0 1 1 1 0 Benyvirus 14KDa protein Pkinase PF00069.25 NODE_61539_length_266_cov_1.393939_g53599_i0forward_frame_1 - 2.2e-25 89.5 1.5 2.3e-25 89.4 1.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_61539_length_266_cov_1.393939_g53599_i0forward_frame_1 - 1.9e-19 69.9 0.6 2e-19 69.9 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 NODE_61539_length_266_cov_1.393939_g53599_i0forward_frame_1 - 0.07 12.8 0.0 0.083 12.5 0.0 1.3 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 MCM PF00493.23 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 9e-41 139.4 0.4 9.6e-41 139.3 0.4 1.0 1 0 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 7.8e-09 35.2 0.0 9.5e-09 34.9 0.0 1.0 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 0.00027 20.7 0.0 0.0003 20.5 0.0 1.0 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_3 PF07726.11 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 0.00083 19.2 0.0 0.00084 19.2 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 0.075 13.0 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DEAD PF00270.29 NODE_61534_length_266_cov_1.502165_g53594_i0forward_frame_1 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase Crl PF07417.12 NODE_61531_length_266_cov_1.528139_g53591_i0reverse_frame_1 - 0.095 12.8 0.7 0.12 12.5 0.1 1.5 2 0 0 2 2 2 0 Sigma factor-binding transcriptional regulator Crl Orf78 PF06024.12 NODE_61523_length_266_cov_1.670996_g53583_i0forward_frame_1 - 0.014 15.7 0.1 0.016 15.5 0.1 1.1 1 0 0 1 1 1 0 Orf78 (ac78) C8 PF08742.11 NODE_61516_length_266_cov_1.761905_g53576_i0forward_frame_1 - 0.021 15.2 0.2 0.031 14.7 0.2 1.3 1 0 0 1 1 1 0 C8 domain KcnmB2_inactiv PF09303.10 NODE_61515_length_266_cov_1.774892_g53575_i0reverse_frame_1 - 0.052 13.3 0.5 0.099 12.5 0.5 1.4 1 0 0 1 1 1 0 KCNMB2, ball and chain domain E1-N PF14463.6 NODE_61514_length_266_cov_1.787879_g53574_i0forward_frame_1 - 0.011 15.5 0.1 0.012 15.4 0.1 1.2 1 0 0 1 1 1 0 E1 N-terminal domain Mistic PF11458.8 NODE_61510_length_266_cov_1.904762_g53570_i0forward_frame_1 - 0.12 12.3 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Membrane-integrating protein Mistic DUF3271 PF11675.8 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.004 16.4 0.9 0.0048 16.2 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3271) GnsAB_toxin PF08178.11 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.0041 17.0 3.2 0.009 15.9 3.2 1.6 1 1 0 1 1 1 1 GnsA/GnsB toxin of bacterial toxin-antitoxin system RRF PF01765.19 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.0049 16.8 3.1 0.0049 16.8 3.1 1.5 1 1 0 1 1 1 1 Ribosome recycling factor T3SSipB PF16535.5 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.012 16.1 2.5 0.013 16.0 2.5 1.2 1 0 0 1 1 1 0 Type III cell invasion protein SipB DUF2115 PF09888.9 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 0.047 14.2 1.2 0.054 14.0 1.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2115) eIF-4B PF06273.11 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_1 - 2.1 7.3 4.9 2.2 7.2 4.9 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B TCR PF03638.15 NODE_61506_length_266_cov_1.974026_g53566_i0forward_frame_1 - 1 9.7 11.8 65 4.0 1.9 2.4 1 1 1 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain ASFV_J13L PF05568.11 NODE_61502_length_266_cov_2.073593_g53562_i0reverse_frame_1 - 0.26 11.0 1.0 0.3 10.8 1.0 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein DUF1286 PF06939.11 NODE_61502_length_266_cov_2.073593_g53562_i0forward_frame_1 - 0.093 13.0 0.1 0.095 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1286) SH3_5 PF08460.10 NODE_61502_length_266_cov_2.073593_g53562_i0forward_frame_1 - 0.1 12.7 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial SH3 domain DUF4139 PF13598.6 NODE_61501_length_266_cov_2.073593_g53561_i0reverse_frame_1 - 0.043 13.5 0.1 0.05 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) TED_complement PF07678.14 NODE_61486_length_266_cov_2.329004_g53546_i0forward_frame_1 - 0.034 13.2 0.3 0.039 13.0 0.3 1.0 1 0 0 1 1 1 0 A-macroglobulin TED domain Sec39 PF08314.11 NODE_61480_length_266_cov_2.480519_g53540_i0reverse_frame_1 - 0.034 12.6 0.3 0.037 12.5 0.3 1.0 1 0 0 1 1 1 0 Secretory pathway protein Sec39 Exc PF07825.11 NODE_61478_length_266_cov_2.567100_g53538_i0forward_frame_1 - 0.048 13.6 0.0 2.7 8.0 0.0 2.2 2 0 0 2 2 2 0 Excisionase-like protein DUF3963 PF13124.6 NODE_61476_length_266_cov_2.640693_g53536_i0forward_frame_1 - 0.12 12.4 0.3 0.2 11.7 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3963) TxDE PF18711.1 NODE_61473_length_266_cov_2.822511_g53533_i0reverse_frame_1 - 0.03 14.5 0.0 8.7 6.5 0.0 2.2 2 0 0 2 2 2 0 Toxoflavin-degrading enzyme DUF1899 PF08953.11 NODE_61473_length_266_cov_2.822511_g53533_i0reverse_frame_1 - 0.17 11.8 0.0 0.9 9.5 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1899) DUF2318 PF10080.9 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_1 - 0.0097 16.0 0.8 0.016 15.3 0.8 1.4 1 0 0 1 1 1 1 Predicted membrane protein (DUF2318) zf-BED PF02892.15 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_1 - 0.057 13.5 2.0 0.12 12.4 2.0 1.5 1 0 0 1 1 1 0 BED zinc finger CHD5 PF04420.14 NODE_61470_length_266_cov_2.891775_g53530_i0forward_frame_1 - 0.061 13.2 3.3 0.073 12.9 3.3 1.1 1 0 0 1 1 1 0 CHD5-like protein 7TM_GPCR_Sra PF02117.16 NODE_61468_length_266_cov_2.969697_g53528_i0forward_frame_1 - 0.0048 15.8 4.1 0.0057 15.5 4.1 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Sra EF-hand_7 PF13499.6 NODE_61462_length_266_cov_3.939394_g53522_i0reverse_frame_1 - 0.00013 22.4 0.4 0.00018 21.9 0.4 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_61462_length_266_cov_3.939394_g53522_i0reverse_frame_1 - 0.0003 20.6 0.0 0.00042 20.1 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_61462_length_266_cov_3.939394_g53522_i0reverse_frame_1 - 0.00042 19.7 0.1 0.0085 15.6 0.0 2.5 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 NODE_61462_length_266_cov_3.939394_g53522_i0reverse_frame_1 - 0.0052 16.6 0.2 5.3 7.2 0.0 2.5 2 1 0 2 2 2 2 EF-hand domain Gamma_PGA_hydro PF05908.11 NODE_61461_length_266_cov_4.203463_g53521_i0forward_frame_1 - 0.029 13.8 2.7 0.034 13.6 2.7 1.1 1 0 0 1 1 1 0 Poly-gamma-glutamate hydrolase Periviscerokin PF08259.11 NODE_61460_length_266_cov_4.580087_g53520_i0forward_frame_1 - 1.9 9.0 5.3 1e+02 3.7 0.4 3.7 3 0 0 3 3 3 0 Periviscerokinin family TBK1_CCD1 PF18394.1 NODE_61455_length_266_cov_33.705628_g53515_i0reverse_frame_1 - 0.009 15.6 0.9 0.01 15.4 0.9 1.1 1 0 0 1 1 1 1 TANK-binding kinase 1 coiled-coil domain 1 SHIPPO-rpt PF07004.12 NODE_61453_length_266_cov_34.995671_g53513_i0reverse_frame_1 - 0.00038 21.2 0.2 0.48 11.4 0.0 2.4 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat DUF3662 PF12401.8 NODE_61453_length_266_cov_34.995671_g53513_i0reverse_frame_1 - 0.043 14.2 0.0 0.053 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2662) DUF3969 PF13108.6 NODE_61443_length_266_cov_55.636364_g53503_i0reverse_frame_1 - 0.028 14.4 0.1 0.04 13.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3969) DUF4985 PF16373.5 NODE_61440_length_266_cov_57.562771_g53500_i0reverse_frame_1 - 0.022 15.2 0.0 0.029 14.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function Matrilin_ccoil PF10393.9 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.029 14.2 1.9 0.13 12.1 0.2 2.7 3 1 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin Sec20 PF03908.13 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.056 13.4 3.1 0.073 13.0 3.1 1.2 1 0 0 1 1 1 0 Sec20 TMPIT PF07851.13 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.18 11.0 4.4 0.2 10.8 4.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein Laminin_II PF06009.12 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.28 11.2 6.3 0.35 10.9 6.3 1.1 1 0 0 1 1 1 0 Laminin Domain II DUF1690 PF07956.11 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 0.5 10.8 8.0 0.82 10.1 8.0 1.3 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF4446 PF14584.6 NODE_61439_length_266_cov_57.826840_g53499_i0forward_frame_1 - 1.3 9.0 7.1 1.2 9.2 4.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) HIPIP PF01355.17 NODE_61435_length_266_cov_61.558442_g53495_i0forward_frame_1 - 0.42 11.0 3.7 0.37 11.2 1.1 2.2 1 1 1 2 2 2 0 High potential iron-sulfur protein RNase_P_Rpp14 PF01900.19 NODE_61434_length_266_cov_62.129870_g53494_i0reverse_frame_1 - 0.13 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Rpp14/Pop5 family UBA_e1_thiolCys PF10585.9 NODE_61430_length_266_cov_65.359307_g53490_i0forward_frame_1 - 9.1e-07 29.0 0.0 1.3e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-activating enzyme active site ThiF PF00899.21 NODE_61430_length_266_cov_65.359307_g53490_i0forward_frame_1 - 3.2e-05 23.4 0.0 3.2e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 ThiF family PAS_4 PF08448.10 NODE_61429_length_266_cov_65.619048_g53489_i0forward_frame_1 - 0.015 15.5 0.0 0.018 15.3 0.0 1.0 1 0 0 1 1 1 0 PAS fold DHODB_Fe-S_bind PF10418.9 NODE_61428_length_266_cov_69.069264_g53488_i0forward_frame_1 - 0.08 12.8 9.2 0.078 12.8 8.0 1.7 2 0 0 2 2 2 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DUF4250 PF14056.6 NODE_61424_length_266_cov_76.818182_g53484_i0reverse_frame_1 - 0.036 14.0 0.1 0.05 13.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) RF3_C PF16658.5 NODE_61424_length_266_cov_76.818182_g53484_i0reverse_frame_1 - 0.16 11.8 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain ELF PF03317.13 NODE_61421_length_266_cov_85.471861_g53481_i0reverse_frame_1 - 0.04 13.9 0.0 0.047 13.7 0.0 1.1 1 0 0 1 1 1 0 ELF protein IGF2_C PF08365.11 NODE_61415_length_266_cov_93.779221_g53475_i0reverse_frame_1 - 0.088 12.8 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide Rav1p_C PF12234.8 NODE_61415_length_266_cov_93.779221_g53475_i0reverse_frame_1 - 0.16 10.3 0.0 0.18 10.2 0.0 1.0 1 0 0 1 1 1 0 RAVE protein 1 C terminal OmpH PF03938.14 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.0007 19.9 5.3 0.00085 19.7 5.3 1.1 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) DUF1759 PF03564.15 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.004 17.1 2.9 0.0044 17.0 2.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1759) TssO PF17561.2 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.0055 16.8 6.5 0.0061 16.7 6.5 1.0 1 0 0 1 1 1 1 Type VI secretion system, TssO Prominin PF05478.11 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.0058 14.7 3.0 0.0056 14.7 3.0 1.0 1 0 0 1 1 1 1 Prominin Ras PF00071.22 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.0096 15.5 0.2 0.011 15.4 0.2 1.1 1 0 0 1 1 1 1 Ras family AAA_32 PF13654.6 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.023 13.5 3.5 0.026 13.3 3.5 1.0 1 0 0 1 1 1 0 AAA domain FAM76 PF16046.5 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.026 13.9 3.4 0.032 13.6 3.4 1.1 1 0 0 1 1 1 0 FAM76 protein CLZ PF16526.5 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.039 14.3 4.9 0.054 13.8 4.5 1.6 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Ly49 PF08391.10 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.059 13.7 4.3 0.072 13.5 4.3 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region CH_2 PF06294.11 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.083 13.0 2.3 0.21 11.8 2.3 1.7 1 1 0 1 1 1 0 CH-like domain in sperm protein Osmo_CC PF08946.10 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.13 12.6 3.4 0.39 11.0 3.4 1.8 1 1 0 1 1 1 0 Osmosensory transporter coiled coil DUF2175 PF09943.9 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.5 10.7 4.4 0.64 10.3 4.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) Nore1-SARAH PF16517.5 NODE_61413_length_266_cov_100.601732_g53473_i0reverse_frame_1 - 0.51 10.3 3.8 1.7 8.6 1.7 2.5 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Peptidase_U4 PF03419.13 NODE_61413_length_266_cov_100.601732_g53473_i0forward_frame_1 - 0.64 9.2 5.3 0.66 9.2 5.3 1.1 1 0 0 1 1 1 0 Sporulation factor SpoIIGA IFRD PF05004.13 NODE_61409_length_266_cov_106.086580_g53469_i0forward_frame_1 - 0.14 11.3 0.0 0.14 11.3 0.0 1.0 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) DUF4632 PF15451.6 NODE_61407_length_266_cov_123.497835_g53467_i0reverse_frame_1 - 0.038 14.1 0.1 0.066 13.3 0.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4632) REV PF00424.18 NODE_61407_length_266_cov_123.497835_g53467_i0reverse_frame_1 - 3.6 7.7 5.2 1.4 9.0 0.2 2.1 1 1 1 2 2 2 0 REV protein (anti-repression trans-activator protein) DUF4727 PF15856.5 NODE_61406_length_266_cov_146.190476_g53466_i0reverse_frame_1 - 0.066 12.8 0.6 0.074 12.6 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4727) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks299.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks299.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks299.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks299.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:15:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Copine PF07002.16 ORF149104 - 4.1e-70 235.6 0.2 5.3e-70 235.3 0.2 1.1 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF149104 - 4.4e-07 30.2 0.0 1.4e-06 28.5 0.0 1.8 2 0 0 2 2 2 1 vWA found in TerF C terminus DUF4407 PF14362.6 ORF145922 - 0.0052 16.2 1.0 0.0052 16.2 1.0 2.5 2 1 1 3 3 3 1 Domain of unknown function (DUF4407) PI3K_P85_iSH2 PF16454.5 ORF145922 - 0.11 12.1 20.3 0.53 9.9 17.3 2.8 2 1 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Flagellin_N PF00669.20 ORF145922 - 0.14 12.3 5.0 0.33 11.0 5.0 1.6 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region Sec16 PF12932.7 ORF145922 - 0.26 11.9 0.9 2.3 8.8 0.0 2.7 1 1 0 2 2 2 0 Vesicle coat trafficking protein Sec16 mid-region Exonuc_VII_L PF02601.15 ORF145922 - 0.45 10.0 9.2 0.71 9.4 9.2 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit ATG16 PF08614.11 ORF145922 - 0.54 10.5 40.8 0.18 12.0 4.3 3.4 3 1 1 4 4 4 0 Autophagy protein 16 (ATG16) Fez1 PF06818.15 ORF145922 - 2.2 8.7 22.4 2.9 8.3 0.1 2.4 1 1 1 2 2 2 0 Fez1 DUF724 PF05266.14 ORF145922 - 4 7.2 20.8 0.35 10.7 5.4 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF724) CorA PF01544.18 ORF145922 - 7.2 5.8 12.3 13 5.0 11.1 1.9 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein CENP-F_leu_zip PF10473.9 ORF145922 - 7.7 6.5 36.5 1.7 8.7 20.1 3.2 2 1 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Orthopox_F7 PF05813.12 ORF137209 - 0.074 13.2 0.5 1.3 9.2 0.0 2.7 2 0 0 2 2 2 0 Orthopoxvirus F7 protein TPR_12 PF13424.6 ORF136120 - 8.4e-22 77.3 2.1 1.1e-10 41.6 0.0 5.2 4 2 2 6 6 6 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF136120 - 1.6e-10 40.3 4.9 0.0013 18.4 0.0 4.5 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF136120 - 4.9e-08 32.6 2.1 0.11 12.7 0.0 4.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF136120 - 9.3e-08 31.6 9.5 0.16 12.2 0.0 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF136120 - 1.6e-07 30.9 0.7 0.45 10.6 0.0 5.4 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF136120 - 2.8e-07 30.2 15.0 0.036 13.9 0.3 6.6 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF136120 - 7.4e-06 26.4 10.8 0.26 11.8 0.3 4.8 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 ORF136120 - 0.019 14.6 0.5 28 4.5 0.0 4.1 5 0 0 5 5 5 0 TPR repeat ANAPC3 PF12895.7 ORF136120 - 0.027 14.7 0.3 11 6.3 0.1 3.4 1 1 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 ORF136120 - 0.076 13.4 4.1 0.48 10.9 0.0 4.3 6 0 0 6 6 6 0 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF136120 - 0.083 12.3 0.1 2.5 7.5 0.1 2.3 1 1 1 2 2 2 0 Coatomer epsilon subunit TPR_14 PF13428.6 ORF136120 - 0.67 10.9 0.0 0.67 10.9 0.0 6.1 5 2 2 7 7 7 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF136120 - 1.9 9.3 12.5 50 4.8 0.0 5.9 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 ORF136120 - 6 7.8 12.0 36 5.4 0.2 5.5 6 0 0 6 6 5 0 Tetratricopeptide repeat LRR_6 PF13516.6 ORF130278 - 2.4e-14 52.1 17.5 0.0014 18.5 0.4 7.2 8 0 0 8 8 8 5 Leucine Rich repeat LRR_8 PF13855.6 ORF130278 - 0.00023 20.9 18.0 2.8 7.8 0.1 6.4 5 2 1 6 6 6 5 Leucine rich repeat LRR_4 PF12799.7 ORF130278 - 0.0004 20.7 16.1 0.14 12.6 0.7 5.6 3 2 1 5 5 5 3 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF130278 - 0.0088 16.5 4.8 8.4 7.4 1.1 5.8 5 1 0 5 5 5 1 Leucine Rich Repeat 4HBT PF03061.22 ORF125319 - 0.00012 22.3 0.0 0.00023 21.5 0.0 1.4 1 0 0 1 1 1 1 Thioesterase superfamily SHIPPO-rpt PF07004.12 ORF124411 - 4.7e-34 115.7 80.8 0.00035 21.3 2.0 12.6 12 0 0 12 12 12 12 Sperm-tail PG-rich repeat PEP-utilizers_C PF02896.18 ORF117723 - 3.6e-88 295.5 0.3 4.7e-88 295.1 0.3 1.0 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF117723 - 0.056 13.2 1.7 0.14 11.9 0.2 2.3 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain WES_acyltransf PF03007.16 ORF116894 - 4.3e-05 23.4 0.0 6.4e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF116894 - 0.00022 21.2 0.0 0.00059 19.8 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Asp PF00026.23 ORF113994 - 1.1e-39 136.8 1.3 1.5e-39 136.3 1.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF113994 - 0.00037 20.8 1.8 0.14 12.4 0.6 2.5 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF113994 - 0.038 13.8 0.0 0.64 9.8 0.0 2.4 1 1 0 1 1 1 0 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF113994 - 0.15 12.8 0.1 35 5.1 0.0 3.1 2 1 0 2 2 2 0 Aspartyl protease PEP-utilizers_C PF02896.18 ORF111652 - 3.6e-88 295.5 0.3 4.7e-88 295.1 0.3 1.0 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF111652 - 0.056 13.2 1.7 0.14 11.9 0.2 2.3 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain Nucleoside_tran PF01733.18 ORF111495 - 5.2e-31 108.2 9.0 5.2e-31 108.2 9.0 1.9 2 0 0 2 2 2 1 Nucleoside transporter MFS_1 PF07690.16 ORF111495 - 3.4e-08 32.8 27.7 5.2e-06 25.6 2.6 2.1 2 0 0 2 2 2 2 Major Facilitator Superfamily Smr PF01713.21 ORF84367 - 3.2e-09 37.0 0.0 7.6e-09 35.8 0.0 1.7 1 0 0 1 1 1 1 Smr domain TPR_1 PF00515.28 ORF77459 - 1.9e-06 27.4 5.1 0.048 13.5 0.6 5.3 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF77459 - 1.6e-05 24.6 5.6 0.4 10.9 0.3 5.1 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF77459 - 5.1e-05 23.2 3.6 4.1 7.9 0.1 4.7 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF77459 - 0.00032 21.1 0.5 0.26 11.8 0.3 3.3 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF77459 - 0.00032 20.9 0.5 0.083 13.2 0.0 3.5 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF77459 - 0.00034 20.2 0.5 0.016 14.9 0.0 2.9 3 0 0 3 3 3 1 TPR repeat TPR_16 PF13432.6 ORF77459 - 0.074 13.7 0.1 7 7.4 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF77459 - 0.35 11.0 1.4 18 5.6 0.1 4.0 4 1 0 4 4 4 0 Tetratricopeptide repeat GAF PF01590.26 ORF7373 - 1.1e-07 32.6 0.0 0.00032 21.4 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 ORF7373 - 0.0081 16.5 0.0 1.5 9.1 0.0 3.4 2 2 0 2 2 2 1 GAF domain tify PF06200.14 ORF7373 - 0.17 11.3 0.2 0.41 10.0 0.2 1.6 1 0 0 1 1 1 0 tify domain Pepdidase_M14_N PF18027.1 ORF66909 - 4.1e-15 56.1 1.4 2e-14 53.9 1.4 2.0 1 1 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain Peptidase_M14 PF00246.24 ORF66909 - 7.5e-12 45.6 0.1 1.6e-11 44.6 0.0 1.6 2 0 0 2 2 2 1 Zinc carboxypeptidase Pox_Ag35 PF03286.14 ORF66909 - 1.3 8.8 6.8 2.3 8.0 6.8 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Na_H_Exchanger PF00999.21 ORF60521 - 1.1e-44 152.8 23.8 1.3e-44 152.6 23.8 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family LapA_dom PF06305.11 ORF60521 - 0.31 10.9 1.9 0.73 9.7 0.3 2.5 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain ChAPs PF09295.10 ORF57475 - 8.8e-08 31.5 0.7 2.1e-07 30.3 0.3 1.8 2 0 0 2 2 2 1 ChAPs (Chs5p-Arf1p-binding proteins) DAGK_acc PF00609.19 ORF42407 - 9.5e-15 55.3 0.0 4.1e-14 53.2 0.0 2.1 1 1 0 1 1 1 1 Diacylglycerol kinase accessory domain DAGK_cat PF00781.24 ORF42407 - 2.8e-09 36.7 0.0 6.8e-09 35.4 0.0 1.7 1 1 0 1 1 1 1 Diacylglycerol kinase catalytic domain DUF3552 PF12072.8 ORF37055 - 0.0018 17.7 9.7 0.0018 17.7 9.7 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF3552) HemX PF04375.14 ORF37055 - 0.014 14.7 22.6 0.054 12.8 7.0 2.2 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF5082 PF16888.5 ORF37055 - 0.041 14.2 25.6 0.83 9.9 2.2 3.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) DUF966 PF06136.13 ORF37055 - 0.23 11.2 12.2 0.27 10.9 12.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF966) FAM76 PF16046.5 ORF37055 - 0.27 10.6 27.1 2.5 7.4 10.2 2.4 1 1 1 2 2 2 0 FAM76 protein Golgin_A5 PF09787.9 ORF37055 - 0.29 10.6 26.2 0.46 9.9 26.2 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 Spc7 PF08317.11 ORF37055 - 0.51 9.2 32.6 1.6 7.5 13.2 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein Atg14 PF10186.9 ORF37055 - 0.64 9.0 33.6 0.02 14.0 18.4 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 TRAF_BIRC3_bd PF16673.5 ORF37055 - 0.99 9.2 13.4 0.54 10.1 2.5 2.7 1 1 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF724 PF05266.14 ORF37055 - 1.6 8.6 20.3 3.8 7.3 17.5 2.8 2 1 2 4 4 3 0 Protein of unknown function (DUF724) DUF16 PF01519.16 ORF37055 - 1.9 9.0 29.0 0.3 11.6 10.7 4.0 1 1 2 3 3 3 0 Protein of unknown function DUF16 DUF4200 PF13863.6 ORF37055 - 1.9 8.9 29.6 7 7.1 7.7 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) HrpB7 PF09486.10 ORF37055 - 2.2 8.6 18.6 4.1 7.8 5.2 3.1 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) kleA_kleC PF17383.2 ORF37055 - 2.3 8.6 6.9 1.5 9.2 2.3 2.7 1 1 2 3 3 3 0 Uncharacterized KorC regulated protein A DUF3450 PF11932.8 ORF37055 - 3.4 6.9 23.2 8.9 5.5 9.9 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) TMF_DNA_bd PF12329.8 ORF37055 - 4.5 7.3 39.6 0.3 11.1 12.0 4.1 1 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding MCC-bdg_PDZ PF10506.9 ORF37055 - 5.4 7.1 11.7 13 5.9 3.4 3.4 2 1 0 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF2968 PF11180.8 ORF37055 - 6 6.5 19.9 0.5 10.0 11.2 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF2968) UPF0242 PF06785.11 ORF37055 - 6.4 6.8 35.1 1.4 9.0 16.8 2.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus HIP1_clath_bdg PF16515.5 ORF37055 - 9.4 6.9 25.6 0.79 10.4 15.3 2.6 1 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TolA_bind_tri PF16331.5 ORF37055 - 9.4 6.4 22.5 7.3 6.7 4.9 3.4 2 1 2 4 4 3 0 TolA binding protein trimerisation APG6_N PF17675.1 ORF37055 - 9.7 6.7 31.1 2.8 8.5 5.8 2.4 1 1 1 2 2 2 0 Apg6 coiled-coil region Aminotran_5 PF00266.19 ORF3526 - 5.5e-92 308.6 0.0 6.5e-92 308.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 ORF3526 - 9e-07 28.5 0.0 1.4e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 ORF3526 - 3.9e-06 26.4 0.0 5e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase Pyridoxal_deC PF00282.19 ORF3526 - 0.03 13.0 0.0 0.067 11.9 0.0 1.6 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain Pik1 PF11522.8 ORF3526 - 0.089 12.8 0.1 0.2 11.6 0.1 1.6 1 0 0 1 1 1 0 Yeast phosphatidylinositol-4-OH kinase Pik1 MFS_1 PF07690.16 ORF25594 - 7.1e-34 117.3 25.3 1.2e-33 116.5 25.3 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF25594 - 1.9e-07 30.3 24.4 1e-06 28.0 13.5 2.1 1 1 1 2 2 2 2 Sugar (and other) transporter AAA_2 PF07724.14 ORF25150 - 7.8e-52 175.8 0.7 1.2e-42 145.9 0.2 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA PF00004.29 ORF25150 - 2.5e-16 60.3 0.1 7.1e-07 29.7 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF25150 - 8.3e-08 32.3 0.2 3.8e-06 27.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF25150 - 3.1e-07 30.7 0.0 0.00012 22.4 0.0 2.5 2 0 0 2 2 2 1 AAA domain ClpB_D2-small PF10431.9 ORF25150 - 4.2e-06 26.7 0.9 2.4e-05 24.3 0.0 2.5 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein MCM PF00493.23 ORF25150 - 2.6e-05 23.4 0.3 0.0016 17.6 0.0 2.3 2 0 0 2 2 2 1 MCM P-loop domain Mg_chelatase PF01078.21 ORF25150 - 0.0002 20.8 0.3 0.0039 16.6 0.0 2.9 3 1 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 ORF25150 - 0.00023 21.6 1.7 0.00056 20.3 0.6 2.3 2 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF25150 - 0.00057 19.7 0.2 0.059 13.1 0.0 2.8 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 ORF25150 - 0.0011 18.6 0.1 0.019 14.6 0.0 2.6 2 1 0 2 2 2 1 Sigma-54 interaction domain AAA_18 PF13238.6 ORF25150 - 0.0014 19.2 0.1 0.0054 17.3 0.0 2.1 2 0 0 2 2 1 1 AAA domain AAA_14 PF13173.6 ORF25150 - 0.0083 16.2 0.1 2.1 8.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain TniB PF05621.11 ORF25150 - 0.0084 15.5 0.3 0.022 14.2 0.0 2.0 2 0 0 2 2 2 1 Bacterial TniB protein IstB_IS21 PF01695.17 ORF25150 - 0.0089 15.8 0.3 0.032 14.0 0.0 1.9 2 1 0 2 2 2 1 IstB-like ATP binding protein AAA_33 PF13671.6 ORF25150 - 0.013 15.7 0.0 0.026 14.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF25150 - 0.013 15.8 1.6 0.2 11.9 0.2 2.8 2 1 1 3 3 2 0 AAA domain TIP49 PF06068.13 ORF25150 - 0.014 14.6 0.6 0.041 13.1 0.0 1.9 2 0 0 2 2 2 0 TIP49 P-loop domain AAA_24 PF13479.6 ORF25150 - 0.023 14.4 0.2 0.12 12.1 0.2 2.2 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF25150 - 0.043 13.3 0.0 0.13 11.8 0.0 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 ORF25150 - 0.05 13.6 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 ORF25150 - 0.051 13.5 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase DEAD PF00270.29 ORF25150 - 0.064 13.0 0.0 1.3 8.7 0.0 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase SRP54 PF00448.22 ORF25150 - 0.073 12.7 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Zeta_toxin PF06414.12 ORF25150 - 0.074 12.3 0.0 0.15 11.3 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin NTPase_1 PF03266.15 ORF25150 - 0.084 12.8 0.3 1.4 8.8 0.0 2.3 2 0 0 2 2 2 0 NTPase ABC_tran PF00005.27 ORF25150 - 0.1 13.1 0.0 0.31 11.6 0.0 1.8 1 1 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 ORF25150 - 0.11 12.9 0.0 1 9.7 0.0 2.2 2 0 0 2 2 2 0 RNA helicase ATP-synt_ab PF00006.25 ORF25150 - 0.14 11.7 0.0 0.39 10.3 0.0 1.7 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain ResIII PF04851.15 ORF25150 - 0.16 11.9 0.5 1.3 9.0 0.0 2.3 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 ORF25150 - 5 7.4 5.3 5.8 7.2 2.9 2.3 2 1 0 2 2 1 0 AAA domain Bestrophin PF01062.21 ORF24236 - 3.4e-06 26.7 0.2 5.3e-06 26.0 0.2 1.3 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF938 PF06080.12 ORF133182 - 0.072 12.8 0.0 0.92 9.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF938) HipA_C PF07804.12 ORF128446 - 4.3e-20 72.3 0.0 6.1e-20 71.8 0.0 1.2 1 0 0 1 1 1 1 HipA-like C-terminal domain MarR_2 PF12802.7 ORF128446 - 0.087 12.7 0.4 0.45 10.4 0.2 2.2 2 0 0 2 2 2 0 MarR family UIM PF02809.20 ORF122862 - 0.074 13.0 0.3 0.2 11.6 0.3 1.8 1 0 0 1 1 1 0 Ubiquitin interaction motif DUF4407 PF14362.6 ORF122862 - 0.1 11.9 1.4 0.14 11.5 1.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HAP2-GCS1 PF10699.9 ORF122862 - 3 7.9 7.9 20 5.3 0.5 2.7 1 1 1 2 2 2 0 Male gamete fusion factor RsgA_GTPase PF03193.16 ORF112107 - 3.4e-06 27.1 0.6 1.1e-05 25.4 0.0 2.1 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF112107 - 4e-06 26.9 0.1 2.3e-05 24.4 0.1 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 ORF112107 - 1.7e-05 24.6 0.1 0.0014 18.4 0.0 3.0 2 1 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation ResIII PF04851.15 ORF112107 - 4.9e-05 23.4 0.6 0.025 14.6 0.2 2.8 2 1 0 2 2 2 2 Type III restriction enzyme, res subunit ABC_tran PF00005.27 ORF112107 - 0.0017 18.9 0.0 0.0045 17.5 0.0 1.8 2 0 0 2 2 2 1 ABC transporter Septin PF00735.18 ORF112107 - 0.0032 16.8 1.0 0.006 15.9 0.1 2.0 2 1 0 2 2 2 1 Septin AAA_22 PF13401.6 ORF112107 - 0.0063 16.8 0.0 0.028 14.7 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF112107 - 0.0064 16.2 0.0 0.019 14.7 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain FtsK_SpoIIIE PF01580.18 ORF112107 - 0.0073 15.7 0.0 0.017 14.5 0.0 1.5 1 0 0 1 1 1 1 FtsK/SpoIIIE family IIGP PF05049.13 ORF112107 - 0.009 15.1 4.9 0.28 10.2 0.1 3.1 3 0 0 3 3 3 1 Interferon-inducible GTPase (IIGP) GTP_EFTU PF00009.27 ORF112107 - 0.01 15.4 0.0 0.024 14.2 0.0 1.5 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain AAA_7 PF12775.7 ORF112107 - 0.013 15.1 0.0 0.036 13.6 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_18 PF13238.6 ORF112107 - 0.014 16.0 0.4 0.18 12.4 0.0 2.6 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 ORF112107 - 0.016 14.3 0.0 0.027 13.5 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein RNA_helicase PF00910.22 ORF112107 - 0.02 15.3 0.1 0.15 12.5 0.0 2.5 2 0 0 2 2 2 0 RNA helicase AAA_16 PF13191.6 ORF112107 - 0.025 15.0 0.0 0.13 12.7 0.0 2.1 2 1 0 2 2 2 0 AAA ATPase domain dNK PF01712.19 ORF112107 - 0.029 14.2 0.0 0.099 12.5 0.0 1.9 1 0 0 1 1 1 0 Deoxynucleoside kinase Roc PF08477.13 ORF112107 - 0.031 14.5 0.1 0.13 12.4 0.1 2.3 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 ORF112107 - 0.051 13.6 3.3 0.095 12.8 0.0 3.0 3 2 1 4 4 4 0 Dynamin family TniB PF05621.11 ORF112107 - 0.064 12.7 0.4 0.15 11.5 0.0 1.7 2 0 0 2 2 2 0 Bacterial TniB protein TsaE PF02367.17 ORF112107 - 0.12 12.3 0.0 0.38 10.7 0.0 1.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_23 PF13476.6 ORF112107 - 3.4 8.1 15.4 3.8 8.0 5.1 3.6 2 1 1 3 3 3 0 AAA domain Pyr_redox_2 PF07992.14 ORF111861 - 4.4e-08 32.7 0.0 8.1e-05 22.0 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase bZIP_1 PF00170.21 ORF111845 - 7.4e-07 29.2 13.3 7.4e-07 29.2 13.3 3.0 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF111845 - 1.8e-06 28.0 13.4 1.8e-06 28.0 13.4 2.9 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF111845 - 0.053 13.3 1.1 0.1 12.3 1.1 1.4 1 0 0 1 1 1 0 Peptidase M76 family DUF5320 PF17253.2 ORF111845 - 2.6 9.1 5.2 0.85 10.7 1.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5320) TAF PF02969.17 ORF96801 - 1.5e-07 31.5 0.5 6.6e-07 29.4 0.3 2.2 2 0 0 2 2 2 1 TATA box binding protein associated factor (TAF) Histone PF00125.24 ORF96801 - 0.016 15.6 1.8 0.035 14.5 0.1 2.1 2 0 0 2 2 2 0 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF96801 - 0.023 15.0 3.0 0.025 14.8 0.6 2.4 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TAF6_C PF07571.13 ORF96801 - 0.029 14.7 0.0 0.11 12.8 0.0 2.0 2 0 0 2 2 2 0 TAF6 C-terminal HEAT repeat domain TFIID-31kDa PF02291.15 ORF96801 - 0.19 11.8 4.9 0.2 11.8 0.2 2.7 3 0 0 3 3 3 0 Transcription initiation factor IID, 31kD subunit 2OG-FeII_Oxy_3 PF13640.6 ORF91636 - 0.034 15.1 0.0 0.077 13.9 0.0 1.6 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily DUF5485 PF17586.2 ORF85481 - 0.043 14.1 0.0 0.093 13.0 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5485) CRAL_TRIO PF00650.20 ORF78250 - 1.5e-14 54.0 0.1 2.3e-14 53.4 0.1 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF78250 - 0.00016 21.8 0.0 0.00027 21.1 0.0 1.3 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain Ank_2 PF12796.7 ORF73212 - 2.9e-37 127.1 1.3 3.7e-11 43.4 0.0 4.0 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF73212 - 2.9e-19 69.2 0.0 1.3e-08 35.2 0.0 5.0 2 1 4 6 6 6 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF73212 - 2.8e-18 65.7 0.2 3.7e-05 23.9 0.0 5.0 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF73212 - 3.8e-15 55.6 0.0 0.004 17.5 0.0 6.5 6 1 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 ORF73212 - 8.9e-10 38.0 0.0 0.012 16.1 0.0 5.6 6 0 0 6 6 6 2 Ankyrin repeat NIF PF03031.18 ORF72062 - 1.3e-46 158.2 0.8 2.4e-46 157.3 0.8 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase SHIPPO-rpt PF07004.12 ORF6655 - 9.1e-26 89.6 93.5 0.0096 16.8 0.3 13.0 12 1 0 12 12 12 12 Sperm-tail PG-rich repeat PAP2 PF01569.21 ORF5386 - 1.4e-09 37.8 6.0 1.4e-09 37.8 6.0 2.4 2 1 1 3 3 3 1 PAP2 superfamily SNARE PF05739.19 ORF5386 - 2.4 8.2 4.5 1.3 9.0 1.2 2.2 2 0 0 2 2 2 0 SNARE domain Histidinol_dh PF00815.20 ORF29364 - 5.3e-166 552.7 2.1 6.5e-166 552.4 2.1 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase FdhE PF04216.12 ORF29364 - 0.3 10.9 3.6 0.11 12.4 0.7 1.7 2 0 0 2 2 2 0 Protein involved in formate dehydrogenase formation Metalloenzyme PF01676.18 ORF26034 - 6.8e-39 133.7 0.0 1e-38 133.1 0.0 1.3 1 1 0 1 1 1 1 Metalloenzyme superfamily Bac_DNA_binding PF00216.21 ORF26034 - 0.12 12.6 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial DNA-binding protein Phosphodiest PF01663.22 ORF26034 - 0.17 11.5 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase 2OG-FeII_Oxy_3 PF13640.6 ORF23151 - 0.034 15.1 0.0 0.077 13.9 0.0 1.6 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily NIF PF03031.18 ORF146867 - 1.3e-46 158.2 0.8 2.4e-46 157.3 0.8 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase 2OG-FeII_Oxy_3 PF13640.6 ORF14084 - 0.034 15.1 0.0 0.077 13.9 0.0 1.6 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily SHIPPO-rpt PF07004.12 ORF136293 - 4.4e-26 90.5 93.9 0.0049 17.7 0.3 13.1 12 1 0 12 12 12 12 Sperm-tail PG-rich repeat zf-RING_2 PF13639.6 ORF135715 - 8.5e-08 32.4 11.5 8.5e-08 32.4 11.5 2.4 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF135715 - 1.3e-05 25.4 13.2 1.3e-05 25.4 13.2 2.6 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF135715 - 3.2e-05 23.7 12.0 3.2e-05 23.7 12.0 2.3 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF135715 - 0.0047 16.9 5.6 0.018 15.1 5.6 2.0 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 ORF135715 - 0.01 15.5 9.6 0.037 13.8 9.6 2.1 1 0 0 1 1 1 0 RING-like zinc finger zf-C3HC4 PF00097.25 ORF135715 - 0.011 15.6 11.9 0.056 13.3 11.9 2.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF135715 - 0.031 14.3 7.8 0.09 12.8 7.8 1.9 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_5 PF14634.6 ORF135715 - 1.4 8.9 10.2 4.9 7.2 10.2 2.0 1 0 0 1 1 1 0 zinc-RING finger domain MgtE PF01769.16 ORF135715 - 2.9 8.3 12.1 2.1 8.7 2.3 2.2 2 0 0 2 2 2 0 Divalent cation transporter Amidohydro_1 PF01979.20 ORF13451 - 1.5e-53 182.3 0.0 1.8e-53 182.1 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF13451 - 0.0026 17.3 0.1 1.5 8.2 0.0 2.6 3 0 0 3 3 3 2 Amidohydrolase family Transpeptidase PF00905.22 ORF132293 - 3.1e-84 282.8 0.1 3.8e-84 282.5 0.1 1.1 1 0 0 1 1 1 1 Penicillin binding protein transpeptidase domain PBP_dimer PF03717.15 ORF132293 - 7.1e-13 49.3 0.4 3.5e-11 43.8 0.4 2.3 1 1 0 1 1 1 1 Penicillin-binding Protein dimerisation domain DUF1616 PF07760.11 ORF132293 - 0.069 12.5 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1616) Nucleoporin2 PF04096.14 ORF131044 - 8.2e-31 107.1 0.0 1.2e-30 106.5 0.0 1.3 1 0 0 1 1 1 1 Nucleoporin autopeptidase MT PF12777.7 ORF131044 - 3.3e-05 23.1 0.1 4.4e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor UPF0004 PF00919.20 ORF131044 - 0.13 12.4 0.1 4 7.6 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized protein family UPF0004 DUF5485 PF17586.2 ORF123310 - 0.043 14.1 0.0 0.093 13.0 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5485) 2OG-FeII_Oxy_3 PF13640.6 ORF12020 - 0.034 15.1 0.0 0.077 13.9 0.0 1.6 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Sugar_tr PF00083.24 ORF117553 - 3.4e-16 59.2 16.2 4.6e-16 58.7 16.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter HMG_box PF00505.19 ORF114741 - 4.3e-17 62.3 7.7 4.3e-17 62.3 7.7 3.1 3 0 0 3 3 3 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF114741 - 3.2e-11 43.6 7.7 3.2e-11 43.6 7.7 3.9 4 0 0 4 4 4 1 HMG-box domain KH_1 PF00013.29 ORF101253 - 2e-20 72.4 4.0 1.1e-11 44.4 0.1 3.7 4 0 0 4 4 4 2 KH domain KH_2 PF07650.17 ORF101253 - 0.0042 16.9 0.8 0.011 15.5 0.8 1.8 1 0 0 1 1 1 1 KH domain eIF3_N PF09440.10 ORF101253 - 0.014 15.8 5.0 1.9 8.9 0.5 3.0 2 1 0 2 2 2 0 eIF3 subunit 6 N terminal domain Tudor-knot PF11717.8 ORF101253 - 0.062 13.2 1.3 0.16 11.9 0.2 2.4 3 0 0 3 3 3 0 RNA binding activity-knot of a chromodomain Thioesterase PF00975.20 ORF90994 - 7.8e-08 32.7 0.0 1.2e-07 32.2 0.0 1.5 1 1 0 1 1 1 1 Thioesterase domain Abhydrolase_6 PF12697.7 ORF90994 - 2.5e-05 25.0 0.0 5.2e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 Alpha/beta hydrolase family FSH1 PF03959.13 ORF90994 - 0.069 12.8 0.0 0.21 11.2 0.0 1.6 1 1 0 1 1 1 0 Serine hydrolase (FSH1) GTP_EFTU PF00009.27 ORF85098 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF85098 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF85098 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF85098 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF85098 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF85098 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF79710 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF79710 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF79710 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF79710 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF79710 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF79710 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF76059 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF76059 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF76059 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF76059 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF76059 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF76059 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Ank_2 PF12796.7 ORF73739 - 4.4e-20 72.1 0.5 4.7e-08 33.5 0.0 3.8 1 1 3 4 4 4 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF73739 - 1.6e-15 56.9 0.5 3.4e-07 30.4 0.0 4.6 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF73739 - 6.8e-11 42.5 0.0 0.00018 22.0 0.0 4.5 3 2 2 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF73739 - 9.4e-10 38.5 0.6 0.59 10.7 0.1 6.2 6 0 0 6 6 6 3 Ankyrin repeat Ank_3 PF13606.6 ORF73739 - 0.0002 21.5 0.0 4.3 8.2 0.0 4.7 5 0 0 5 5 5 1 Ankyrin repeat GTP_EFTU PF00009.27 ORF69529 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF69529 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF69529 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF69529 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF69529 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF69529 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF68802 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF68802 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF68802 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF68802 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF68802 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF68802 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 MFS_1 PF07690.16 ORF67438 - 1.6e-21 76.7 33.9 1.5e-17 63.5 31.3 2.0 1 1 0 2 2 2 2 Major Facilitator Superfamily SPC25 PF06703.11 ORF67438 - 0.43 10.4 0.0 0.43 10.4 0.0 2.3 3 0 0 3 3 3 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Sigma_reg_N PF13800.6 ORF67438 - 2.8 8.3 6.0 1.4 9.3 0.1 3.3 3 0 0 3 3 3 0 Sigma factor regulator N-terminal GTP_EFTU PF00009.27 ORF52643 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF52643 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF52643 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF52643 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF52643 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF52643 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GXGXG PF01493.19 ORF49848 - 5.5e-67 225.0 10.7 8.1e-67 224.5 10.7 1.2 1 0 0 1 1 1 1 GXGXG motif Glu_synthase PF01645.17 ORF49848 - 8.5e-20 71.2 0.1 1.2e-19 70.8 0.1 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase HU-HIG PF18291.1 ORF49848 - 0.13 12.4 0.0 0.67 10.1 0.0 2.1 2 0 0 2 2 2 0 HU domain fused to wHTH, Ig, or Glycine-rich motif GTP_EFTU PF00009.27 ORF48918 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF48918 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF48918 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF48918 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF48918 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF48918 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Nucleoside_tran PF01733.18 ORF39830 - 1.7e-54 185.3 16.6 2.5e-54 184.8 16.6 1.2 1 0 0 1 1 1 1 Nucleoside transporter EMC3_TMCO1 PF01956.16 ORF39830 - 4.6 6.9 15.1 0.88 9.3 2.0 2.5 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Nup54 PF13874.6 ORF39200 - 6.7e-14 52.2 9.9 6.2e-13 49.1 7.0 2.4 1 1 1 2 2 2 1 Nucleoporin complex subunit 54 UPF0449 PF15136.6 ORF39200 - 0.2 12.2 12.3 0.61 10.6 1.1 2.8 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 Cas6 PF09559.10 ORF39200 - 0.22 11.5 1.7 0.34 10.9 0.6 1.7 2 0 0 2 2 2 0 Cas6 Crispr SlyX PF04102.12 ORF39200 - 0.32 11.6 8.2 2.5 8.8 0.9 3.5 2 1 2 4 4 4 0 SlyX Sec34 PF04136.15 ORF39200 - 0.43 10.5 12.9 0.095 12.6 2.5 3.0 2 1 1 3 3 3 0 Sec34-like family NPV_P10 PF05531.12 ORF39200 - 1.4 9.5 8.2 2.5 8.6 1.0 3.0 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DHR10 PF18595.1 ORF39200 - 1.5 8.9 9.7 9.1 6.4 2.4 2.6 1 1 0 2 2 2 0 Designed helical repeat protein 10 domain CENP-H PF05837.12 ORF39200 - 4.5 7.7 15.3 7.6 7.0 6.8 2.7 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Cytochrom_C_2 PF01322.20 ORF39200 - 8.3 7.3 9.0 1.5 9.7 4.2 2.3 2 1 1 3 3 3 0 Cytochrome C' DUF3533 PF12051.8 ORF39200 - 8.3 5.2 9.6 0.71 8.7 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3533) SKA2 PF16740.5 ORF39200 - 8.7 6.2 12.3 15 5.4 5.6 3.2 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 GTP_EFTU PF00009.27 ORF28882 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF28882 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF28882 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF28882 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF28882 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF28882 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF28502 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF28502 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF28502 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF28502 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF28502 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF28502 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF147262 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF147262 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF147262 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF147262 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF147262 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF147262 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 UCH PF00443.29 ORF145286 - 0.053 13.0 3.6 0.12 11.8 3.6 1.6 1 1 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase GTP_EFTU PF00009.27 ORF140283 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF140283 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF140283 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF140283 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF140283 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF140283 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF13970 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF13970 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF13970 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF13970 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF13970 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF13970 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Glyco_hydro_16 PF00722.21 ORF138493 - 2.9e-06 26.9 0.0 1e-05 25.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolases family 16 PAN_4 PF14295.6 ORF138493 - 0.0015 18.4 1.2 0.0015 18.4 1.2 2.2 2 0 0 2 2 2 1 PAN domain GTP_EFTU PF00009.27 ORF117690 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF117690 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF117690 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF117690 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF117690 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF117690 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 DUF4203 PF13886.6 ORF116948 - 3.8e-13 49.6 15.2 3.8e-13 49.6 15.2 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4203) CIMR PF00878.18 ORF116948 - 1.1e-05 25.5 1.5 0.0077 16.3 0.5 2.5 2 0 0 2 2 2 2 Cation-independent mannose-6-phosphate receptor repeat Pepsin-I3 PF06394.13 ORF110159 - 0.056 13.6 4.9 0.13 12.5 0.4 3.2 3 0 0 3 3 3 0 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF110159 - 5 7.5 11.6 1.1 9.6 0.2 3.8 3 2 1 4 4 4 0 HalX domain GTP_EFTU PF00009.27 ORF107221 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF107221 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF107221 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF107221 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF107221 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF107221 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF103320 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF103320 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF103320 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF103320 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF103320 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF103320 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 ORF102942 - 1.7e-53 181.1 0.0 2.7e-53 180.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF102942 - 1.9e-36 124.8 0.1 5.2e-36 123.4 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF102942 - 9.2e-14 51.6 0.9 2e-13 50.5 0.3 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF102942 - 9.3e-05 22.5 0.2 0.0092 16.1 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 ORF102942 - 0.018 14.2 0.6 0.93 8.6 0.1 2.8 3 0 0 3 3 3 0 G-protein alpha subunit GTP_EFTU_D4 PF14578.6 ORF102942 - 0.059 13.3 0.3 0.18 11.7 0.3 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 DUF4215 PF13948.6 NODE_11028_length_1319_cov_441.147975_g8173_i0forward_frame_1 - 2.7e-08 34.1 13.3 2.7e-08 34.1 13.3 3.2 3 0 0 3 3 3 1 Domain of unknown function (DUF4215) TRP PF06011.12 NODE_11028_length_1319_cov_441.147975_g8173_i0forward_frame_1 - 0.00097 18.0 13.6 0.00097 18.0 13.6 2.5 2 1 0 2 2 2 1 Transient receptor potential (TRP) ion channel FANCI_S3 PF14677.6 NODE_11028_length_1319_cov_441.147975_g8173_i0forward_frame_1 - 0.0019 18.0 0.4 0.0037 17.0 0.4 1.5 1 0 0 1 1 1 1 FANCI solenoid 3 SSPI PF14098.6 NODE_11028_length_1319_cov_441.147975_g8173_i0forward_frame_1 - 0.085 13.0 0.1 0.3 11.3 0.1 1.9 1 0 0 1 1 1 0 Small, acid-soluble spore protein I Peptidase_C1 PF00112.23 ORF97210 - 8.8e-48 163.3 3.4 1.8e-47 162.3 3.4 1.5 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF97210 - 1.4e-07 31.8 0.5 2.7e-07 30.9 0.5 1.4 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF97210 - 0.099 11.4 0.2 8.1 5.1 0.0 2.1 2 0 0 2 2 2 0 Peptidase C1-like family AAA PF00004.29 ORF93623 - 3e-40 137.7 0.0 6.6e-40 136.6 0.0 1.6 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF93623 - 2.3e-09 36.9 0.1 5.5e-09 35.7 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 ORF93623 - 2.6e-05 24.3 0.1 0.00018 21.5 0.0 2.4 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF93623 - 8.5e-05 23.0 0.1 0.0012 19.3 0.0 2.2 1 1 1 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 ORF93623 - 0.00046 20.3 0.0 0.0015 18.6 0.0 1.9 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 ORF93623 - 0.0005 19.3 0.0 0.00091 18.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 ORF93623 - 0.00059 20.1 0.0 0.0087 16.3 0.0 2.3 1 1 1 2 2 2 1 AAA domain RuvB_N PF05496.12 ORF93623 - 0.0024 17.7 0.0 0.0049 16.6 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 ORF93623 - 0.0039 17.7 0.0 0.011 16.3 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF93623 - 0.0078 16.4 0.6 0.012 15.8 0.0 1.6 2 0 0 2 2 1 1 AAA domain AAA_28 PF13521.6 ORF93623 - 0.012 15.9 0.0 0.024 14.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF93623 - 0.017 14.6 0.0 0.041 13.4 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region Mg_chelatase PF01078.21 ORF93623 - 0.023 14.1 0.2 0.066 12.6 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF93623 - 0.026 13.8 0.0 0.046 12.9 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_24 PF13479.6 ORF93623 - 0.041 13.6 0.0 0.16 11.7 0.0 2.0 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF93623 - 0.042 14.2 0.0 0.15 12.5 0.0 1.9 2 0 0 2 2 1 0 RNA helicase Sigma54_activat PF00158.26 ORF93623 - 0.052 13.2 0.0 0.12 12.0 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 ORF93623 - 0.058 13.1 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_3 PF07726.11 ORF93623 - 0.065 13.1 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 ORF93623 - 0.068 13.0 0.3 0.21 11.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 ORF93623 - 0.31 10.9 2.9 2.5 8.0 0.0 2.8 2 1 1 3 3 3 0 ATPase domain predominantly from Archaea NIT PF08376.10 ORF90517 - 3.8e-07 30.8 0.0 9.7e-07 29.5 0.0 1.6 1 1 0 1 1 1 1 Nitrate and nitrite sensing GatB_Yqey PF02637.18 ORF90517 - 0.061 13.2 0.0 3.5 7.5 0.0 2.5 2 0 0 2 2 2 0 GatB domain ENTH PF01417.20 ORF76902 - 0.011 15.7 0.3 0.022 14.8 0.3 1.6 1 0 0 1 1 1 0 ENTH domain AadA_C PF18280.1 ORF76902 - 0.091 12.9 0.0 0.95 9.6 0.0 2.2 2 0 0 2 2 2 0 Aminoglycoside adenyltransferase C-terminal domain eIF-5_eIF-2B PF01873.17 ORF73856 - 8e-23 80.6 0.8 2.5e-22 78.9 0.8 1.9 1 0 0 1 1 1 1 Domain found in IF2B/IF5 W2 PF02020.18 ORF73856 - 8.1e-13 48.3 3.5 7e-12 45.3 3.5 2.7 1 0 0 1 1 1 1 eIF4-gamma/eIF5/eIF2-epsilon Coilin_N PF15862.5 ORF73856 - 9.7e-05 22.2 17.7 0.0016 18.3 1.0 2.7 2 1 0 2 2 2 2 Coilin N-terminus DUF913 PF06025.12 ORF73856 - 0.25 10.3 17.5 0.12 11.4 6.1 2.3 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) CNDH2_C PF16858.5 ORF73856 - 0.68 9.8 25.5 0.4 10.5 3.6 2.4 2 0 0 2 2 2 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term RNA_pol_Rpc4 PF05132.14 ORF73856 - 2.1 8.7 20.9 0.84 10.1 4.7 2.4 2 0 0 2 2 2 0 RNA polymerase III RPC4 SET PF00856.28 ORF73856 - 4.2 7.7 12.5 8.1 6.8 0.3 2.5 2 0 0 2 2 2 0 SET domain Neur_chan_memb PF02932.16 ORF73856 - 7 6.6 14.4 1.1 9.3 1.4 2.1 2 0 0 2 2 2 0 Neurotransmitter-gated ion-channel transmembrane region eIF-3c_N PF05470.12 ORF73856 - 7.9 4.6 33.2 0.37 9.0 13.9 2.1 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus eIF-3_zeta PF05091.12 ORF71008 - 4.3 6.2 9.1 5.9 5.7 9.1 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Sec20 PF03908.13 ORF65319 - 7.8 6.5 7.1 3.4 7.7 0.9 3.2 3 0 0 3 3 3 0 Sec20 MORN PF02493.20 ORF5937 - 2.1e-91 294.6 147.7 1.6e-07 30.8 3.3 18.1 18 0 0 18 18 18 18 MORN repeat His_Phos_2 PF00328.22 ORF37816 - 2.3e-15 56.8 2.3 5.2e-12 45.8 0.7 3.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) DUF866 PF05907.13 ORF37816 - 0.027 14.4 0.4 0.042 13.8 0.4 1.3 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF866) Nuc_sug_transp PF04142.15 ORF25179 - 5.9e-10 38.8 2.0 1.1e-09 37.9 2.0 1.4 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF25179 - 1e-07 32.2 27.1 5.8e-07 29.8 3.3 3.5 3 1 0 3 3 3 2 EamA-like transporter family SLC35F PF06027.12 ORF25179 - 0.00017 21.3 20.9 0.0025 17.4 20.9 2.1 1 1 0 1 1 1 1 Solute carrier family 35 CRT-like PF08627.10 ORF25179 - 0.00028 20.0 8.5 0.00028 20.0 8.5 2.7 2 1 1 3 3 3 2 CRT-like, chloroquine-resistance transporter-like UAA PF08449.11 ORF25179 - 0.01 15.1 17.1 0.022 14.0 4.8 2.5 1 1 2 3 3 3 0 UAA transporter family DMT_6 PF04342.12 ORF25179 - 0.89 9.8 8.0 5.6 7.2 0.5 2.6 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) PrgI PF12666.7 ORF25179 - 5.8 7.7 7.4 17 6.2 1.9 3.4 2 1 1 3 3 3 0 PrgI family protein Nuc_sug_transp PF04142.15 ORF24169 - 6.1e-10 38.8 0.9 6.1e-10 38.8 0.9 1.6 1 1 0 2 2 2 1 Nucleotide-sugar transporter EamA PF00892.20 ORF24169 - 5.1e-08 33.2 26.4 5.8e-07 29.8 3.3 3.4 3 1 0 3 3 3 2 EamA-like transporter family SLC35F PF06027.12 ORF24169 - 0.00025 20.7 21.1 0.0035 16.9 21.1 2.1 1 1 0 1 1 1 1 Solute carrier family 35 CRT-like PF08627.10 ORF24169 - 0.00026 20.1 8.4 0.00026 20.1 8.4 2.7 2 1 1 3 3 3 1 CRT-like, chloroquine-resistance transporter-like UAA PF08449.11 ORF24169 - 0.0052 16.0 17.1 0.022 14.0 4.8 2.5 1 1 2 3 3 3 3 UAA transporter family DMT_6 PF04342.12 ORF24169 - 0.82 9.9 7.9 5.6 7.2 0.5 2.6 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) TPT PF03151.16 ORF24169 - 1.8 7.8 12.3 3.5 6.9 12.3 1.6 1 1 0 1 1 1 0 Triose-phosphate Transporter family PCI PF01399.27 ORF197 - 8.4e-17 61.6 3.4 4.4e-16 59.3 1.8 2.8 3 0 0 3 3 3 1 PCI domain CSN8_PSD8_EIF3K PF10075.9 ORF197 - 0.00019 21.4 0.9 0.00036 20.5 0.9 1.4 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family TPR_7 PF13176.6 ORF197 - 0.0071 16.3 0.3 0.27 11.4 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF197 - 0.027 14.7 1.1 0.12 12.7 0.0 2.6 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2225 PF09986.9 ORF197 - 0.18 11.5 7.9 0.21 11.3 0.4 2.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) SPACA9 PF15120.6 ORF197 - 0.29 10.9 5.4 0.61 9.9 1.4 3.0 2 1 1 3 3 3 0 Sperm acrosome-associated protein 9 IQ PF00612.27 ORF16374 - 0.043 13.6 20.8 0.46 10.4 4.9 4.2 4 0 0 4 4 4 0 IQ calmodulin-binding motif WD40 PF00400.32 ORF15866 - 3.7e-20 71.9 0.4 0.00012 22.8 0.1 4.6 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF15866 - 1.3e-09 38.2 1.0 0.00012 22.3 0.1 3.8 2 2 2 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain PPP5 PF08321.12 ORF15866 - 0.065 13.5 2.1 0.19 12.1 2.1 1.8 1 0 0 1 1 1 0 PPP5 TPR repeat region Ntox50 PF15542.6 ORF15866 - 8.9 7.2 10.6 2.2 9.1 0.2 3.3 2 1 1 3 3 3 0 Bacterial toxin 50 EF-hand_1 PF00036.32 ORF13497 - 2.7e-12 45.3 0.1 5.4e-05 22.5 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF13497 - 4.1e-11 43.2 0.3 6.1e-05 23.4 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF13497 - 1e-10 40.6 0.0 0.00067 19.4 0.1 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF13497 - 6.6e-09 34.9 0.2 0.0019 17.6 0.0 2.8 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF13497 - 0.00017 21.3 0.2 0.079 12.8 0.1 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF13497 - 0.066 13.2 0.7 4.5 7.3 0.0 2.9 2 2 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF13497 - 0.087 12.7 0.0 7 6.6 0.0 2.6 2 0 0 2 2 2 0 EF hand EamA PF00892.20 ORF129698 - 4.9e-05 23.5 11.5 4.9e-05 23.5 11.5 2.8 2 1 1 3 3 3 1 EamA-like transporter family Prion_bPrPp PF11587.8 ORF129698 - 0.067 13.0 2.6 0.58 10.0 0.5 2.6 2 0 0 2 2 2 0 Major prion protein bPrPp - N terminal Clavanin PF05452.11 ORF129698 - 0.07 13.3 0.3 0.31 11.3 0.1 2.1 2 0 0 2 2 2 0 Clavanin EamA PF00892.20 ORF129133 - 4.9e-05 23.5 11.5 4.9e-05 23.5 11.5 2.8 2 1 1 3 3 3 1 EamA-like transporter family Prion_bPrPp PF11587.8 ORF129133 - 0.067 13.0 2.6 0.58 10.0 0.5 2.6 2 0 0 2 2 2 0 Major prion protein bPrPp - N terminal Clavanin PF05452.11 ORF129133 - 0.07 13.3 0.3 0.31 11.3 0.1 2.1 2 0 0 2 2 2 0 Clavanin PCI PF01399.27 ORF123737 - 8.4e-17 61.6 3.4 4.4e-16 59.3 1.8 2.8 3 0 0 3 3 3 1 PCI domain CSN8_PSD8_EIF3K PF10075.9 ORF123737 - 0.00019 21.4 0.9 0.00036 20.5 0.9 1.4 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family TPR_7 PF13176.6 ORF123737 - 0.0071 16.3 0.3 0.27 11.4 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF123737 - 0.027 14.7 1.1 0.12 12.7 0.0 2.6 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2225 PF09986.9 ORF123737 - 0.18 11.5 7.9 0.21 11.3 0.4 2.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) SPACA9 PF15120.6 ORF123737 - 0.29 10.9 5.4 0.61 9.9 1.4 3.0 2 1 1 3 3 3 0 Sperm acrosome-associated protein 9 Circo_capsid PF02443.15 ORF121985 - 0.3 10.7 4.4 0.59 9.7 4.4 1.4 1 0 0 1 1 1 0 Circovirus capsid protein DUF4933 PF16287.5 ORF116257 - 0.045 13.1 0.3 0.077 12.4 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4933) FrhB_FdhB_N PF04422.13 ORF116257 - 0.078 13.1 0.0 0.21 11.7 0.0 1.7 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Peptidase_S49 PF01343.18 ORF116257 - 0.084 12.8 4.1 0.091 12.7 0.6 2.3 2 0 0 2 2 2 0 Peptidase family S49 Tox-REase-3 PF15647.6 ORF116257 - 0.17 12.2 3.8 0.17 12.2 1.3 2.4 2 0 0 2 2 2 0 Restriction endonuclease fold toxin 3 HALZ PF02183.18 ORF116257 - 1.8 8.8 9.3 9.8 6.5 1.0 3.4 3 0 0 3 3 3 0 Homeobox associated leucine zipper Metal_resist PF13801.6 ORF116257 - 4.9 7.4 5.2 9.3 6.5 0.2 2.4 2 0 0 2 2 2 0 Heavy-metal resistance PCI PF01399.27 ORF113024 - 8.4e-17 61.6 3.4 4.4e-16 59.3 1.8 2.8 3 0 0 3 3 3 1 PCI domain CSN8_PSD8_EIF3K PF10075.9 ORF113024 - 0.00019 21.4 0.9 0.00036 20.5 0.9 1.4 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family TPR_7 PF13176.6 ORF113024 - 0.0071 16.3 0.3 0.27 11.4 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF113024 - 0.027 14.7 1.1 0.12 12.7 0.0 2.6 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2225 PF09986.9 ORF113024 - 0.18 11.5 7.9 0.21 11.3 0.4 2.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) SPACA9 PF15120.6 ORF113024 - 0.29 10.9 5.4 0.61 9.9 1.4 3.0 2 1 1 3 3 3 0 Sperm acrosome-associated protein 9 EamA PF00892.20 ORF110831 - 4.9e-05 23.5 11.5 4.9e-05 23.5 11.5 2.8 2 1 1 3 3 3 1 EamA-like transporter family Prion_bPrPp PF11587.8 ORF110831 - 0.067 13.0 2.6 0.58 10.0 0.5 2.6 2 0 0 2 2 2 0 Major prion protein bPrPp - N terminal Clavanin PF05452.11 ORF110831 - 0.07 13.3 0.3 0.31 11.3 0.1 2.1 2 0 0 2 2 2 0 Clavanin TTL PF03133.15 ORF102628 - 1.7e-90 303.1 3.2 2.8e-90 302.5 3.2 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF102628 - 1.1e-08 34.6 0.4 0.00034 20.0 0.0 3.5 3 1 0 3 3 3 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF102628 - 0.00064 19.1 0.1 0.045 13.0 0.0 2.6 2 1 0 2 2 2 2 Sugar-transfer associated ATP-grasp RimK PF08443.11 ORF102628 - 0.035 13.7 0.0 0.46 10.1 0.0 2.3 2 0 0 2 2 2 0 RimK-like ATP-grasp domain Thioredoxin PF00085.20 NODE_11030_length_1319_cov_328.348910_g8175_i0reverse_frame_2 - 1.6e-05 24.8 0.0 3.9e-05 23.6 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin Ion_trans PF00520.31 ORF94204 - 3.9e-14 52.5 7.3 3.9e-14 52.5 7.3 1.5 2 0 0 2 2 2 1 Ion transport protein cNMP_binding PF00027.29 ORF94204 - 5.1e-12 45.7 0.0 8.2e-12 45.0 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Ion_trans_2 PF07885.16 ORF94204 - 4.9e-10 39.2 9.5 1.5e-09 37.7 9.5 1.9 1 1 0 1 1 1 1 Ion channel HCV_NS2 PF01538.18 ORF94204 - 0.0034 17.1 0.0 0.0065 16.1 0.0 1.4 1 1 0 1 1 1 1 Hepatitis C virus non-structural protein NS2 Syntaxin PF00804.25 ORF94204 - 0.018 14.7 1.1 5.3 6.7 0.1 2.3 2 0 0 2 2 2 0 Syntaxin ELFV_dehydrog PF00208.21 ORF94204 - 0.14 11.9 0.2 3.4 7.3 0.0 2.2 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Anoctamin PF04547.12 ORF9199 - 5.9e-08 32.0 7.4 5.9e-08 32.0 7.4 2.5 1 1 1 2 2 2 1 Calcium-activated chloride channel RSN1_7TM PF02714.15 ORF9199 - 0.00025 20.5 16.2 0.0015 18.0 2.3 2.7 2 1 1 3 3 3 2 Calcium-dependent channel, 7TM region, putative phosphate TMC PF07810.13 ORF9199 - 0.016 15.8 0.6 0.016 15.8 0.6 2.5 2 1 0 2 2 2 0 TMC domain zf-C4H2 PF10146.9 ORF9199 - 0.11 12.8 3.5 0.17 12.1 3.5 1.2 1 0 0 1 1 1 0 Zinc finger-containing protein DUF456 PF04306.13 ORF9199 - 1.7 9.0 6.3 0.14 12.4 1.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF456) Amidohydro_1 PF01979.20 ORF83013 - 3.8e-84 282.9 0.0 4.4e-84 282.7 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF83013 - 3.2e-17 63.2 0.0 6.7e-12 45.6 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family Peripla_BP_1 PF00532.21 ORF83013 - 0.049 13.1 0.0 0.077 12.4 0.0 1.3 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family DDE_Tnp_1_7 PF13843.6 ORF77731 - 0.044 13.1 0.1 0.069 12.4 0.1 1.2 1 0 0 1 1 1 0 Transposase IS4 DUF3584 PF12128.8 ORF77731 - 0.42 8.1 14.5 0.17 9.4 9.8 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 ORF77731 - 0.66 9.8 21.8 0.21 11.5 13.6 2.7 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain BshC PF10079.9 ORF77731 - 1.5 7.5 8.4 9.1 4.9 0.1 2.4 2 1 0 2 2 2 0 Bacillithiol biosynthesis BshC Fez1 PF06818.15 ORF77731 - 4.5 7.7 11.1 9.1 6.7 0.0 2.5 2 1 0 2 2 2 0 Fez1 CC2-LZ PF16516.5 ORF77731 - 6 7.3 9.9 1.8 9.0 0.6 3.5 2 2 2 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Exonuc_VII_L PF02601.15 ORF77731 - 6.2 6.3 12.5 50 3.3 12.5 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit Creatinase_N PF01321.18 ORF76658 - 5.1e-16 59.5 0.0 1e-15 58.6 0.0 1.5 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Peptidase_M24 PF00557.24 ORF76658 - 8.4e-15 55.0 0.0 1.2e-14 54.5 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF2935 PF11155.8 ORF7064 - 0.037 14.4 3.8 2.8 8.3 1.0 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF2935) ISG65-75 PF11727.8 ORF7064 - 0.43 9.8 4.5 1.1 8.4 1.6 2.2 1 1 1 2 2 2 0 Invariant surface glycoprotein YtxH PF12732.7 ORF7064 - 1.4 9.5 4.9 7.4 7.2 0.0 3.1 3 0 0 3 3 3 0 YtxH-like protein DUF262 PF03235.14 ORF63939 - 2.6e-15 57.2 0.0 4.9e-15 56.3 0.0 1.6 1 1 0 1 1 1 1 Protein of unknown function DUF262 DUF3459 PF11941.8 ORF58681 - 8.2e-08 32.5 0.0 1.9e-07 31.3 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Alpha-amylase_C PF02806.18 ORF58681 - 3.6e-07 30.5 0.0 6.7e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 ORF58681 - 0.00026 20.7 0.0 0.00061 19.5 0.0 1.6 1 0 0 1 1 1 1 Alpha amylase, catalytic domain RCC1_2 PF13540.6 ORF42835 - 4.7e-22 77.2 8.0 1.3e-08 34.4 0.9 5.4 6 0 0 6 6 6 4 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF42835 - 4.3e-21 75.3 0.6 7.8e-06 26.4 0.0 6.6 6 1 0 6 6 6 3 Regulator of chromosome condensation (RCC1) repeat Pkinase PF00069.25 ORF41318 - 2.2e-45 155.1 0.0 3.2e-45 154.6 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41318 - 2.8e-22 79.3 0.0 3.8e-22 78.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF41318 - 2.1e-08 33.8 0.0 3e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF41318 - 6.2e-06 25.7 0.1 1.4e-05 24.5 0.0 1.6 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF41318 - 0.00038 19.4 0.0 0.00085 18.2 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF41318 - 0.0036 17.3 0.0 0.0089 16.0 0.0 1.6 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF41318 - 0.032 13.2 0.0 0.049 12.6 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain DUF3237 PF11578.8 ORF41318 - 0.14 12.0 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) DUF1043 PF06295.12 ORF18062 - 0.0081 16.2 3.2 0.0081 16.2 3.2 3.1 3 2 0 3 3 3 1 Protein of unknown function (DUF1043) PMD PF10536.9 ORF18062 - 0.38 9.8 3.1 1.3 8.1 0.5 2.3 2 0 0 2 2 2 0 Plant mobile domain DUF3911 PF13050.6 ORF18062 - 5.9 7.1 8.7 7.4 6.8 2.1 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3911) zf-CCCH PF00642.24 ORF17027 - 1.9e-14 53.1 9.7 1.9e-08 34.0 1.0 2.4 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF17027 - 3.1e-07 30.2 14.3 0.00011 22.2 2.9 2.4 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF17027 - 5.3e-06 26.1 8.1 0.00044 20.0 0.8 2.4 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF17027 - 0.036 14.8 10.9 0.12 13.1 0.7 3.5 2 1 1 3 3 3 0 Torus domain DUF2570 PF10828.8 ORF17027 - 0.091 12.6 2.7 0.16 11.8 2.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) zf-CCCH_2 PF14608.6 ORF17027 - 9.4 6.9 15.8 0.59 10.7 0.6 3.3 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger WD40 PF00400.32 ORF16714 - 9.3e-13 48.4 7.6 1.8e-05 25.4 0.7 4.0 4 1 1 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF16714 - 7.8e-06 26.1 0.1 0.068 13.5 0.0 3.5 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF16714 - 0.028 13.1 0.1 0.3 9.7 0.1 2.1 1 1 1 2 2 2 0 Nucleoporin Nup120/160 RRM_1 PF00076.22 ORF149990 - 4.7e-20 71.2 0.6 9e-15 54.3 0.0 4.4 3 2 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF149990 - 1.5e-05 25.0 0.0 8e-05 22.7 0.0 2.2 2 0 0 2 2 2 1 RNA recognition motif CtaG_Cox11 PF04442.14 ORF149526 - 1.2e-44 151.9 0.5 2.3e-44 151.0 0.5 1.5 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 MutL_C PF08676.11 ORF149526 - 0.064 13.0 1.2 0.12 12.1 1.2 1.4 1 0 0 1 1 1 0 MutL C terminal dimerisation domain DUF3459 PF11941.8 ORF145630 - 8.2e-08 32.5 0.0 1.9e-07 31.3 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Alpha-amylase_C PF02806.18 ORF145630 - 3.6e-07 30.5 0.0 6.7e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 ORF145630 - 0.00026 20.7 0.0 0.00061 19.5 0.0 1.6 1 0 0 1 1 1 1 Alpha amylase, catalytic domain Tower PF09121.10 ORF143279 - 0.65 10.2 6.0 2 8.7 6.0 1.8 1 0 0 1 1 1 0 Tower CDC27 PF09507.10 ORF143279 - 0.86 8.9 38.1 0.28 10.5 26.6 2.2 2 0 0 2 2 2 0 DNA polymerase subunit Cdc27 Mur_ligase_M PF08245.12 ORF14142 - 4.1e-08 33.5 0.0 1.6e-07 31.5 0.0 2.0 2 1 0 2 2 2 1 Mur ligase middle domain TIMP PF00965.17 ORF14142 - 0.15 11.9 0.0 0.42 10.4 0.0 1.7 1 0 0 1 1 1 0 Tissue inhibitor of metalloproteinase ABC_transp_aux PF09822.9 ORF139986 - 7.2e-07 28.9 0.2 1e-06 28.4 0.2 1.3 1 0 0 1 1 1 1 ABC-type uncharacterized transport system Use1 PF09753.9 ORF134630 - 5.8 6.5 5.1 4.4 6.9 1.9 2.0 2 0 0 2 2 2 0 Membrane fusion protein Use1 Ion_trans PF00520.31 ORF131210 - 3.9e-14 52.5 7.3 3.9e-14 52.5 7.3 1.5 2 0 0 2 2 2 1 Ion transport protein cNMP_binding PF00027.29 ORF131210 - 5.1e-12 45.7 0.0 8.2e-12 45.0 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Ion_trans_2 PF07885.16 ORF131210 - 4.9e-10 39.2 9.5 1.5e-09 37.7 9.5 1.9 1 1 0 1 1 1 1 Ion channel HCV_NS2 PF01538.18 ORF131210 - 0.0034 17.1 0.0 0.0065 16.1 0.0 1.4 1 1 0 1 1 1 1 Hepatitis C virus non-structural protein NS2 Syntaxin PF00804.25 ORF131210 - 0.018 14.7 1.1 5.3 6.7 0.1 2.3 2 0 0 2 2 2 0 Syntaxin ELFV_dehydrog PF00208.21 ORF131210 - 0.14 11.9 0.2 3.4 7.3 0.0 2.2 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Chloroa_b-bind PF00504.21 ORF11798 - 2e-33 116.2 0.0 3.4e-33 115.5 0.0 1.4 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Rieske PF00355.26 ORF11798 - 5.7e-12 45.4 0.0 1.2e-11 44.4 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF11798 - 1.2e-06 28.4 0.0 2e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Abhydrolase_1 PF00561.20 ORF116448 - 2.6e-16 60.1 0.6 4.9e-12 46.0 0.3 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF116448 - 8.9e-16 57.2 0.0 1.8e-15 56.2 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF116448 - 3.3e-07 29.8 0.0 0.0015 17.8 0.0 2.3 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF116448 - 0.019 14.4 0.4 0.094 12.2 0.1 2.3 3 0 0 3 3 3 0 Prolyl oligopeptidase family FSH1 PF03959.13 ORF116448 - 0.083 12.5 0.0 0.32 10.6 0.0 1.9 3 0 0 3 3 3 0 Serine hydrolase (FSH1) ArfGap PF01412.18 ORF116376 - 1.6e-36 125.0 1.0 1.6e-36 125.0 1.0 2.2 2 0 0 2 2 2 1 Putative GTPase activating protein for Arf DUF3391 PF11871.8 ORF116376 - 0.0064 17.0 2.7 0.013 16.0 2.7 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3391) DUF5102 PF17104.5 ORF116376 - 0.014 15.4 3.6 0.014 15.4 3.6 3.5 1 1 3 4 4 4 0 Domain of unknown function (DUF5102) zf-C4H2 PF10146.9 ORF113122 - 0.0033 17.7 0.8 0.0033 17.7 0.8 2.4 2 1 0 2 2 2 1 Zinc finger-containing protein ERM PF00769.19 ORF113122 - 0.008 16.0 13.5 0.008 16.0 13.5 2.3 2 0 0 2 2 2 1 Ezrin/radixin/moesin family DUF4200 PF13863.6 ORF113122 - 0.01 16.2 2.7 0.01 16.2 2.7 3.5 2 2 1 3 3 3 0 Domain of unknown function (DUF4200) Phage_GPO PF05929.11 ORF113122 - 0.043 13.4 13.9 0.29 10.7 6.8 2.1 2 0 0 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase ADIP PF11559.8 ORF113122 - 0.21 11.7 22.3 0.12 12.5 2.6 2.4 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding FAM76 PF16046.5 ORF113122 - 0.3 10.4 14.0 0.031 13.6 3.6 2.3 2 0 0 2 2 2 0 FAM76 protein HMMR_C PF15908.5 ORF113122 - 0.35 11.1 12.3 0.53 10.5 0.4 3.1 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor C-terminal Cob_adeno_trans PF01923.18 ORF113122 - 0.38 10.9 9.0 0.22 11.6 3.3 2.2 2 0 0 2 2 2 0 Cobalamin adenosyltransferase AAA_13 PF13166.6 ORF113122 - 0.58 8.7 15.8 1.1 7.9 15.8 1.4 1 1 0 1 1 1 0 AAA domain Filament PF00038.21 ORF113122 - 0.62 9.6 21.0 0.26 10.8 9.9 2.8 2 1 0 2 2 2 0 Intermediate filament protein NPV_P10 PF05531.12 ORF113122 - 0.66 10.5 9.5 13 6.3 0.5 3.4 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Muted PF14942.6 ORF113122 - 0.68 10.3 18.5 0.069 13.5 7.3 2.6 3 0 0 3 3 2 0 Organelle biogenesis, Muted-like protein UPF0242 PF06785.11 ORF113122 - 0.79 9.8 20.9 0.38 10.8 8.1 3.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus COG5 PF10392.9 ORF113122 - 0.89 9.7 8.2 0.97 9.6 0.3 2.6 2 1 0 2 2 2 0 Golgi transport complex subunit 5 FlaC_arch PF05377.11 ORF113122 - 1.2 9.6 9.1 1.5 9.3 0.0 4.3 4 1 1 5 5 5 0 Flagella accessory protein C (FlaC) GAS PF13851.6 ORF113122 - 1.2 8.4 28.3 3.5 6.9 13.7 2.8 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding CENP-H PF05837.12 ORF113122 - 1.7 9.1 21.7 0.23 11.9 0.2 2.9 2 1 1 3 3 3 0 Centromere protein H (CENP-H) DUF1664 PF07889.12 ORF113122 - 1.7 8.7 16.7 2.5 8.1 2.4 3.5 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) T3SSipB PF16535.5 ORF113122 - 4.3 7.8 19.0 2.2 8.7 13.0 2.2 2 0 0 2 2 2 0 Type III cell invasion protein SipB DUF16 PF01519.16 ORF113122 - 6 7.4 16.1 10 6.7 0.4 3.8 2 2 0 2 2 2 0 Protein of unknown function DUF16 Spc7 PF08317.11 ORF113122 - 7.4 5.4 23.7 0.77 8.6 12.8 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF113122 - 7.8 6.7 28.2 0.58 10.4 14.1 3.0 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 DUF4349 PF14257.6 ORF113122 - 8.6 5.7 13.5 1.3 8.5 0.3 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4349) Baculo_PEP_C PF04513.12 ORF113122 - 8.8 6.4 9.0 3.2 7.8 1.8 2.9 2 2 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus YabA PF06156.13 ORF113122 - 9.2 7.0 12.9 22 5.8 0.2 3.0 2 1 1 3 3 3 0 Initiation control protein YabA Asp_Arg_Hydrox PF05118.15 ORF108794 - 8.4e-37 126.4 0.0 1.3e-36 125.8 0.0 1.3 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase DUF3459 PF11941.8 ORF104271 - 8.2e-08 32.5 0.0 1.9e-07 31.3 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Alpha-amylase_C PF02806.18 ORF104271 - 3.6e-07 30.5 0.0 6.7e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Alpha-amylase PF00128.24 ORF104271 - 0.00026 20.7 0.0 0.00061 19.5 0.0 1.6 1 0 0 1 1 1 1 Alpha amylase, catalytic domain ARL2_Bind_BART PF11527.8 ORF95036 - 9.2e-38 128.9 3.8 3.3e-37 127.1 3.8 2.0 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART UIM PF02809.20 ORF95036 - 0.0012 18.6 18.4 0.034 14.0 2.4 3.5 3 0 0 3 3 3 2 Ubiquitin interaction motif DUF5362 PF17319.2 ORF95036 - 0.061 13.2 0.3 0.42 10.5 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5362) ADP_ribosyl_GH PF03747.14 ORF81852 - 5.2e-49 167.5 0.0 7.1e-49 167.1 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Gly-zipper_Omp PF13488.6 ORF81852 - 0.51 10.4 3.4 3.2 7.8 0.1 2.3 2 0 0 2 2 2 0 Glycine zipper Gly-zipper_YMGG PF13441.6 ORF81852 - 8.8 6.2 6.7 1.5 8.6 0.3 2.2 2 0 0 2 2 2 0 YMGG-like Gly-zipper Cation_efflux PF01545.21 ORF75472 - 2.2e-23 83.0 1.6 8e-23 81.2 1.6 1.8 1 1 0 1 1 1 1 Cation efflux family FtsL PF04999.13 ORF75472 - 0.035 14.1 0.3 0.19 11.8 0.0 2.3 2 0 0 2 2 2 0 Cell division protein FtsL DUF547 PF04784.14 ORF70503 - 2.2e-14 53.5 0.0 4.4e-14 52.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF547 DEP PF00610.21 ORF70503 - 7e-08 32.4 1.0 1.2e-07 31.7 0.1 1.9 2 0 0 2 2 2 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) DUF5603 PF18231.1 ORF70503 - 0.09 13.1 1.5 0.34 11.2 0.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5603) SBBP PF06739.11 ORF67431 - 9.6e-17 60.7 14.5 0.00091 19.2 0.1 7.2 8 0 0 8 8 8 5 Beta-propeller repeat Reg_prop PF07494.11 ORF67431 - 0.0038 17.3 0.7 81 4.0 0.0 5.1 4 0 0 4 4 4 0 Two component regulator propeller DUF5122 PF17164.4 ORF67431 - 0.0045 17.2 21.9 1 9.7 0.4 6.4 6 0 0 6 6 6 2 Domain of unknown function (DUF5122) beta-propeller PAS_3 PF08447.12 ORF67431 - 0.056 13.7 10.9 7.5 6.9 0.0 5.1 6 0 0 6 6 6 0 PAS fold DUF746 PF05344.11 ORF67431 - 0.099 12.5 1.1 17 5.3 0.1 3.5 4 0 0 4 4 4 0 Domain of Unknown Function (DUF746) TAP_C PF03943.13 ORF67431 - 0.48 10.1 1.4 20 4.9 0.0 3.2 3 0 0 3 3 3 0 TAP C-terminal domain Phage_lysozyme2 PF18013.1 ORF67431 - 7.5 6.6 6.2 16 5.5 0.1 3.6 4 0 0 4 4 4 0 Phage tail lysozyme DUF2207 PF09972.9 ORF65778 - 0.0028 16.5 0.6 0.0028 16.5 0.6 1.5 2 0 0 2 2 2 1 Predicted membrane protein (DUF2207) ThrE PF06738.12 ORF65778 - 0.051 12.9 0.0 0.082 12.3 0.0 1.3 1 0 0 1 1 1 0 Putative threonine/serine exporter Phage_holin_3_6 PF07332.11 ORF65778 - 0.13 12.3 1.7 0.22 11.5 1.7 1.3 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Jiraiya PF15038.6 ORF65778 - 6.4 6.2 5.8 11 5.4 5.8 1.3 1 0 0 1 1 1 0 Jiraiya NTP_transferase PF00483.23 ORF63924 - 2.9e-69 233.4 0.0 3.6e-69 233.1 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 ORF63924 - 3.6e-08 33.9 0.0 6.1e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 ORF63924 - 0.047 12.6 0.0 0.61 9.0 0.1 2.1 2 0 0 2 2 2 0 L-fucokinase Hexapep PF00132.24 ORF63924 - 0.72 9.7 2.7 4.1 7.3 0.0 2.9 2 1 1 3 3 3 0 Bacterial transferase hexapeptide (six repeats) DUF2630 PF10944.8 ORF42052 - 0.02 15.3 6.3 0.65 10.5 0.4 3.8 4 0 0 4 4 4 0 Protein of unknown function (DUF2630) Aminotran_5 PF00266.19 ORF36091 - 9.5e-142 472.3 0.0 1.1e-141 472.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF36091 - 0.0032 16.0 0.0 0.0043 15.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme SelA PF03841.13 ORF36091 - 0.17 10.8 0.0 0.29 10.1 0.0 1.3 1 0 0 1 1 1 0 L-seryl-tRNA selenium transferase ADP_ribosyl_GH PF03747.14 ORF35816 - 5.2e-49 167.5 0.0 7.1e-49 167.1 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Gly-zipper_Omp PF13488.6 ORF35816 - 0.51 10.4 3.4 3.2 7.8 0.1 2.3 2 0 0 2 2 2 0 Glycine zipper Gly-zipper_YMGG PF13441.6 ORF35816 - 8.8 6.2 6.7 1.5 8.6 0.3 2.2 2 0 0 2 2 2 0 YMGG-like Gly-zipper UDPGT PF00201.18 ORF35679 - 1.1e-12 47.6 0.2 2.4e-12 46.4 0.0 1.6 2 1 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF35679 - 1.5e-05 25.0 0.0 2.6e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Nucleoside_tran PF01733.18 ORF28102 - 7.8e-29 101.0 18.6 1.1e-28 100.5 18.6 1.2 1 0 0 1 1 1 1 Nucleoside transporter PPR_2 PF13041.6 ORF27907 - 4e-46 155.0 0.8 8.2e-13 48.3 0.0 7.2 3 1 5 8 8 8 6 PPR repeat family PPR PF01535.20 ORF27907 - 5e-37 123.6 0.1 1.4e-06 28.1 0.0 8.8 9 0 0 9 9 9 5 PPR repeat PPR_1 PF12854.7 ORF27907 - 1.4e-27 95.0 0.0 3.8e-06 26.5 0.0 6.6 6 0 0 6 6 6 5 PPR repeat PPR_3 PF13812.6 ORF27907 - 5e-26 90.6 0.0 1.2e-10 41.3 0.0 5.2 4 1 1 5 5 5 4 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF27907 - 3.5e-16 59.2 2.2 1.5e-11 44.1 0.1 2.8 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP TPR_19 PF14559.6 ORF27907 - 0.0026 18.2 9.2 2.8 8.5 0.0 5.1 4 1 3 7 7 7 3 Tetratricopeptide repeat Wzy_C_2 PF11846.8 ORF27907 - 0.0037 17.2 1.0 2.5 8.0 0.0 3.8 2 2 1 3 3 3 1 Virulence factor membrane-bound polymerase, C-terminal Clathrin PF00637.20 ORF27907 - 0.029 14.2 0.0 19 5.1 0.0 3.8 1 1 1 4 4 4 0 Region in Clathrin and VPS SelB-wing_1 PF09105.10 ORF27907 - 0.06 13.3 0.0 8.9 6.4 0.0 3.1 2 0 0 2 2 2 0 Elongation factor SelB, winged helix NusA_N PF08529.11 ORF27907 - 0.098 13.0 0.0 0.27 11.6 0.0 1.7 1 0 0 1 1 1 0 NusA N-terminal domain SesA PF17107.5 ORF27907 - 2.2 8.5 4.4 8.6 6.6 0.1 3.4 3 1 1 4 4 4 0 N-terminal domain on NACHT_NTPase and P-loop NTPases NIF PF03031.18 ORF15218 - 1.1e-46 158.5 1.4 2e-46 157.6 1.4 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Ank_5 PF13857.6 ORF143537 - 4.1e-05 23.8 0.0 0.00011 22.4 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF143537 - 0.0017 18.7 0.0 0.0098 16.3 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF143537 - 0.0038 17.8 0.0 0.018 15.6 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF143537 - 0.038 14.6 0.0 0.11 13.1 0.0 1.8 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF143537 - 0.042 14.4 0.0 0.12 13.0 0.0 1.8 1 0 0 1 1 1 0 Ankyrin repeat Borrelia_P83 PF05262.11 ORF143537 - 0.5 8.8 19.5 0.61 8.5 19.5 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein PP2C PF00481.21 ORF138286 - 1.8e-56 191.6 0.0 3.8e-56 190.6 0.0 1.5 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF138286 - 3.5e-11 43.2 1.2 8.3e-10 38.6 0.0 2.4 2 1 0 2 2 2 1 Protein phosphatase 2C DUF2052 PF09747.9 ORF138286 - 0.67 10.1 11.8 1.1 9.3 11.8 1.3 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Ion_trans PF00520.31 ORF137654 - 3e-17 62.7 13.3 4.7e-17 62.0 13.3 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF137654 - 0.0016 18.2 0.4 0.0054 16.6 0.4 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF137654 - 0.0071 16.8 0.1 0.015 15.7 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair DUF2818 PF10993.8 ORF133947 - 0.069 13.7 1.8 1.8 9.2 0.1 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2818) Lactonase PF10282.9 ORF1305 - 0.041 13.1 0.5 0.041 13.1 0.5 2.2 2 1 0 2 2 2 0 Lactonase, 7-bladed beta-propeller Syntaxin-6_N PF09177.11 ORF126170 - 0.023 15.3 18.0 3.6 8.2 1.8 4.5 3 1 1 4 4 4 0 Syntaxin 6, N-terminal ApoLp-III PF07464.11 ORF126170 - 0.023 14.8 8.9 0.63 10.1 1.0 2.6 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) LURAP PF14854.6 ORF126170 - 0.04 13.9 3.5 2.4 8.1 0.1 2.5 2 0 0 2 2 2 0 Leucine rich adaptor protein Exonuc_VII_L PF02601.15 ORF126170 - 0.17 11.4 22.5 0.046 13.3 8.4 2.4 1 1 0 2 2 2 0 Exonuclease VII, large subunit CorA PF01544.18 ORF126170 - 0.18 11.1 14.6 1.4 8.1 7.1 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF948 PF06103.11 ORF126170 - 0.32 11.3 5.3 0.72 10.2 0.1 3.2 3 1 0 3 3 2 0 Bacterial protein of unknown function (DUF948) Tweety PF04906.13 ORF126170 - 0.49 9.0 4.7 2.6 6.6 0.2 2.4 2 1 0 2 2 2 0 Tweety TPR_18 PF13512.6 ORF126170 - 0.56 10.3 4.0 0.24 11.5 1.0 1.9 2 1 0 2 2 2 0 Tetratricopeptide repeat Sec8_exocyst PF04048.14 ORF126170 - 1.3 8.9 13.0 6.6 6.6 1.7 3.7 3 1 1 4 4 4 0 Sec8 exocyst complex component specific domain Baculo_PEP_C PF04513.12 ORF126170 - 1.8 8.6 7.5 4.5 7.3 0.3 3.6 2 2 2 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus FAM76 PF16046.5 ORF126170 - 2.1 7.6 14.9 0.34 10.2 7.2 2.2 1 1 0 2 2 2 0 FAM76 protein TMF_DNA_bd PF12329.8 ORF126170 - 2.4 8.2 8.8 0.9 9.6 0.2 3.9 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF1664 PF07889.12 ORF126170 - 3.2 7.8 19.6 3.9 7.5 0.3 4.5 2 2 2 5 5 5 0 Protein of unknown function (DUF1664) OmpH PF03938.14 ORF126170 - 3.3 8.1 17.1 0.47 10.8 3.8 2.9 2 2 0 2 2 2 0 Outer membrane protein (OmpH-like) Phage_GPO PF05929.11 ORF126170 - 4.6 6.8 28.1 4.3 6.9 4.6 3.2 2 1 1 3 3 3 0 Phage capsid scaffolding protein (GPO) serine peptidase LXG PF04740.12 ORF126170 - 5.6 6.6 15.1 0.29 10.8 5.0 2.9 2 1 1 3 3 3 0 LXG domain of WXG superfamily DUF4600 PF15372.6 ORF126170 - 6.2 7.3 14.8 0.2 12.1 3.5 3.4 2 2 1 3 3 3 0 Domain of unknown function (DUF4600) DDE_Tnp_1_7 PF13843.6 ORF117195 - 0.044 13.1 0.1 0.069 12.4 0.1 1.2 1 0 0 1 1 1 0 Transposase IS4 DUF3584 PF12128.8 ORF117195 - 0.42 8.1 14.5 0.17 9.4 9.8 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF3584) Apolipoprotein PF01442.18 ORF117195 - 0.69 9.8 21.9 0.18 11.7 13.7 2.7 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain BshC PF10079.9 ORF117195 - 1.4 7.5 8.4 9.1 4.9 0.1 2.4 2 1 0 2 2 2 0 Bacillithiol biosynthesis BshC Fez1 PF06818.15 ORF117195 - 4.4 7.7 11.1 9.1 6.7 0.0 2.5 2 1 0 2 2 2 0 Fez1 CC2-LZ PF16516.5 ORF117195 - 6.2 7.2 9.9 1.8 9.0 0.6 3.5 2 2 2 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Exonuc_VII_L PF02601.15 ORF117195 - 6.4 6.2 12.5 54 3.2 12.6 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit N-glycanase_C PF09113.10 ORF112377 - 2.4e-27 95.4 0.4 3.7e-27 94.7 0.4 1.3 1 0 0 1 1 1 1 Peptide-N-glycosidase F, C terminal eRF1_2 PF03464.15 ORF105190 - 5.5e-44 149.7 0.0 8.5e-44 149.1 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 ORF105190 - 1.7e-33 115.5 0.0 3.1e-33 114.6 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.15 ORF105190 - 5.2e-17 62.1 0.0 8e-17 61.4 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 1 acVLRF1 PF18859.1 ORF105190 - 2.9e-09 37.3 0.0 4.4e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 ORF105190 - 2.9e-09 37.3 0.0 4.8e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 Abhydrolase_1 PF00561.20 ORF97944 - 5.7e-17 62.2 1.0 9.8e-17 61.4 1.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF97944 - 6.8e-14 51.2 0.5 3.6e-13 48.9 0.1 2.4 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF97944 - 6e-09 35.5 0.0 1.3e-05 24.6 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF97944 - 0.00017 21.1 0.0 0.0082 15.6 0.0 2.6 3 0 0 3 3 3 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF97944 - 0.021 15.4 0.0 0.039 14.5 0.0 1.5 1 1 0 1 1 1 0 Alpha/beta hydrolase family FSH1 PF03959.13 ORF97944 - 0.088 12.5 0.0 0.44 10.2 0.0 1.9 2 0 0 2 2 2 0 Serine hydrolase (FSH1) DUF3098 PF11297.8 ORF97944 - 0.094 12.3 0.0 0.23 11.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3098) MatE PF01554.18 ORF96084 - 1.6e-34 118.9 21.4 5e-19 68.5 2.8 3.4 4 0 0 4 4 4 2 MatE Prok-TraM PF09228.10 ORF9530 - 0.13 12.6 0.1 0.29 11.5 0.1 1.5 1 0 0 1 1 1 0 Prokaryotic Transcriptional repressor TraM WD40 PF00400.32 ORF93924 - 1.4e-16 60.6 11.6 0.00037 21.2 0.0 6.2 5 1 1 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF93924 - 3.9e-10 39.9 4.2 0.00017 21.8 0.1 4.4 2 1 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF93924 - 0.0022 17.9 0.0 0.089 12.7 0.0 2.3 2 0 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 ORF93924 - 0.15 11.0 0.0 0.46 9.4 0.0 1.8 1 1 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein EamA PF00892.20 ORF93768 - 2.5e-05 24.4 11.8 2.5e-05 24.4 11.8 2.8 2 1 0 2 2 2 1 EamA-like transporter family SLC35F PF06027.12 ORF93768 - 0.001 18.7 3.6 0.001 18.7 3.6 2.0 2 1 0 2 2 2 1 Solute carrier family 35 EmrE PF13536.6 ORF93768 - 0.014 15.0 4.4 0.025 14.2 4.4 1.6 1 1 0 1 1 1 0 Putative multidrug resistance efflux transporter TPIP1 PF15338.6 ORF79981 - 0.012 15.6 0.2 0.45 10.6 0.1 2.7 2 1 1 3 3 3 0 p53-regulated apoptosis-inducing protein 1 5_nucleotid_C PF02872.18 ORF74068 - 8.4e-29 100.8 0.0 1.4e-28 100.1 0.0 1.3 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Metallophos PF00149.28 ORF74068 - 1.3e-13 51.9 0.2 1.8e-13 51.5 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF445 PF04286.12 ORF68212 - 0.053 13.3 6.5 0.34 10.7 6.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF445) DUF4090 PF13319.6 ORF68212 - 0.11 12.8 0.0 0.36 11.1 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF4090) Transglut_i_TM PF14400.6 ORF68212 - 0.21 11.6 1.6 0.4 10.7 0.2 2.1 2 0 0 2 2 2 0 Inactive transglutaminase fused to 7 transmembrane helices DUF1619 PF07773.11 ORF5143 - 6.4e-14 52.6 0.0 2.1e-09 37.8 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1619) SCP2 PF02036.17 ORF4719 - 1.9e-19 70.0 0.0 3.7e-19 69.1 0.0 1.5 1 0 0 1 1 1 1 SCP-2 sterol transfer family RCC1_2 PF13540.6 ORF47010 - 2.5e-21 74.9 25.7 0.00046 19.9 0.1 9.4 9 0 0 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF47010 - 0.023 14.6 3.5 17 5.4 0.1 4.4 2 1 2 5 5 5 0 Lipocalin / cytosolic fatty-acid binding protein family Abhydrolase_1 PF00561.20 ORF33557 - 1.1e-16 61.2 0.1 2.5e-12 47.0 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF33557 - 3.1e-13 49.1 0.0 6.6e-13 48.0 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF33557 - 1.1e-06 28.1 0.0 0.019 14.3 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_5 PF12695.7 ORF33557 - 0.00034 20.4 0.0 0.0054 16.5 0.0 2.4 3 0 0 3 3 3 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF33557 - 0.011 15.2 0.4 0.096 12.2 0.0 2.3 2 1 0 2 2 2 0 Prolyl oligopeptidase family FSH1 PF03959.13 ORF33557 - 0.032 13.9 0.0 0.15 11.7 0.0 2.1 3 0 0 3 3 3 0 Serine hydrolase (FSH1) AXE1 PF05448.12 ORF33557 - 0.054 12.2 0.1 0.15 10.7 0.1 1.7 1 1 0 1 1 1 0 Acetyl xylan esterase (AXE1) BAAT_C PF08840.11 ORF33557 - 0.095 12.6 0.0 3.5 7.5 0.0 2.3 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Tubulin-binding PF00418.19 ORF33557 - 1.1 9.4 3.6 12 6.0 0.0 3.0 3 0 0 3 3 3 0 Tau and MAP protein, tubulin-binding repeat FBPase PF00316.20 ORF29261 - 6.1e-85 283.5 0.2 8e-85 283.1 0.2 1.1 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Abhydrolase_1 PF00561.20 ORF24139 - 6.7e-16 58.7 0.1 5.6e-15 55.7 0.1 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF24139 - 1.1e-14 53.7 0.1 6.7e-14 51.2 0.0 2.2 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF24139 - 7.5e-08 31.9 0.0 0.00022 20.6 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF24139 - 0.00062 19.3 0.0 0.0097 15.4 0.0 2.6 3 0 0 3 3 3 1 Prolyl oligopeptidase family FSH1 PF03959.13 ORF24139 - 0.094 12.4 0.0 0.37 10.4 0.0 1.8 2 0 0 2 2 2 0 Serine hydrolase (FSH1) DUF3098 PF11297.8 ORF24139 - 0.096 12.3 0.0 0.23 11.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3098) DUF2615 PF11027.8 ORF21353 - 0.097 12.8 0.1 3.5 7.8 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2615) PIG-F PF06699.11 ORF21353 - 0.71 10.0 7.3 7.4 6.7 7.3 2.2 1 1 0 1 1 1 0 GPI biosynthesis protein family Pig-F GWT1 PF06423.12 ORF21353 - 9.1 6.4 13.8 4.3e+02 1.0 13.8 2.6 1 1 0 1 1 1 0 GWT1 V_ATPase_I PF01496.19 ORF18989 - 0.0017 16.4 8.4 0.0017 16.4 8.4 3.0 1 1 2 3 3 3 2 V-type ATPase 116kDa subunit family Trimer_CC PF08954.11 ORF18989 - 0.013 15.1 0.9 0.013 15.1 0.9 3.8 4 0 0 4 4 4 0 Trimerisation motif AAA_13 PF13166.6 ORF18989 - 1.9 7.1 56.4 0.026 13.2 0.9 3.0 1 1 2 3 3 3 0 AAA domain DUF1664 PF07889.12 ORF18989 - 4 7.5 40.6 0.67 10.0 7.0 4.2 2 1 2 4 4 4 0 Protein of unknown function (DUF1664) DUF4407 PF14362.6 ORF18989 - 7.1 5.9 49.0 0.081 12.3 14.3 3.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF2615 PF11027.8 ORF18201 - 0.12 12.5 1.0 0.29 11.3 1.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) Tetraspanin PF00335.20 ORF135395 - 0.067 12.9 0.1 0.17 11.5 0.1 1.7 1 0 0 1 1 1 0 Tetraspanin family Ion_trans PF00520.31 ORF133813 - 1.1e-17 64.2 27.3 1.4e-17 63.8 27.3 1.1 1 0 0 1 1 1 1 Ion transport protein tRNA-synt_1b PF00579.25 ORF129198 - 7.4e-20 71.4 0.0 4.2e-19 69.0 0.0 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks29.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks29.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks29.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks29.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PTS_2-RNA PF01885.16 ORF88361 - 9.3e-07 29.1 0.0 1.8e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family CLASP_N PF12348.8 ORF13603 - 5.9e-26 91.4 31.8 3.7e-11 43.0 4.0 4.7 4 0 0 4 4 4 4 CLASP N terminal HEAT PF02985.22 ORF13603 - 2.4e-11 42.9 5.8 0.34 11.3 0.2 10.0 12 0 0 12 12 12 2 HEAT repeat HEAT_2 PF13646.6 ORF13603 - 7.8e-05 23.0 0.0 3.8 8.0 0.0 5.6 4 2 3 7 7 7 2 HEAT repeats DUF3437 PF11919.8 ORF13603 - 0.00011 22.1 0.8 0.084 12.8 0.1 4.9 4 1 0 4 4 4 1 Domain of unknown function (DUF3437) Cnd1 PF12717.7 ORF13603 - 0.0002 21.4 44.6 0.024 14.7 3.6 7.6 6 3 2 9 9 9 4 non-SMC mitotic condensation complex subunit 1 Cohesin_HEAT PF12765.7 ORF13603 - 0.054 13.8 1.2 0.3 11.4 0.1 3.0 3 0 0 3 3 3 0 HEAT repeat associated with sister chromatid cohesion RTP1_C1 PF10363.9 ORF13603 - 0.067 13.4 11.4 0.19 11.9 0.1 4.4 5 0 0 5 5 5 0 Required for nuclear transport of RNA pol II C-terminus 1 Vac14_Fab1_bd PF12755.7 ORF13603 - 0.089 13.4 25.8 0.12 13.0 0.6 6.8 7 1 1 8 8 8 0 Vacuolar 14 Fab1-binding region RasGEF_N_2 PF14663.6 ORF13603 - 0.31 11.4 13.8 6.6 7.2 0.2 5.8 5 0 0 5 5 5 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain NUC173 PF08161.12 ORF13603 - 1.6 8.4 7.8 5.5 6.6 0.6 4.4 4 2 1 5 5 5 0 NUC173 domain UCH PF00443.29 ORF124672 - 1.5e-44 152.4 6.4 1.5e-44 152.4 6.4 2.0 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF124672 - 8.6e-26 91.3 7.4 2.6e-25 89.7 7.4 1.9 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase TraO PF10626.9 ORF124672 - 0.11 12.3 0.1 0.34 10.6 0.1 1.8 1 0 0 1 1 1 0 Conjugative transposon protein TraO MTCP1 PF08991.10 ORF124672 - 0.13 12.5 2.6 0.57 10.5 2.6 2.1 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type RVT_1 PF00078.27 ORF21580 - 2.1e-26 92.8 0.0 2.1e-25 89.6 0.0 2.2 1 1 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Exo_endo_phos PF03372.23 ORF21580 - 9.2e-06 25.3 0.0 3.8e-05 23.3 0.0 2.0 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF21580 - 0.003 17.4 0.0 0.0088 15.9 0.0 1.9 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase UCH PF00443.29 ORF21580 - 0.018 14.5 0.4 0.93 8.9 0.0 2.7 1 1 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase zf-C2H2_9 PF16293.5 ORF21580 - 0.036 13.9 1.1 0.11 12.3 0.1 2.5 2 0 0 2 2 2 0 C2H2 type zinc-finger (1 copy) Cys_rich_CPCC PF14206.6 ORF21580 - 0.13 12.1 0.3 1.7 8.5 0.1 2.6 2 0 0 2 2 2 0 Cysteine-rich CPCC zf-C2H2_2 PF12756.7 ORF21580 - 0.28 11.5 9.3 8.5 6.8 1.5 3.5 2 2 2 4 4 4 0 C2H2 type zinc-finger (2 copies) Dynein_C PF18199.1 ORF82199 - 1.2e-110 369.6 0.0 2.8e-109 365.1 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF82199 - 4.2e-81 271.3 0.5 4.2e-81 271.3 0.5 3.5 4 0 0 4 4 4 1 ATP-binding dynein motor region AAA_8 PF12780.7 ORF82199 - 1.3e-71 241.0 3.9 7.9e-71 238.4 0.0 2.6 2 0 0 2 2 2 1 P-loop containing dynein motor region D4 AAA_lid_11 PF18198.1 ORF82199 - 1.1e-57 194.4 0.0 2.9e-57 193.0 0.0 1.8 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain MT PF12777.7 ORF82199 - 2.3e-43 148.6 19.7 4.2e-43 147.7 19.7 1.4 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Dynein_heavy PF03028.15 ORF82199 - 2.8e-41 140.4 0.0 1.2e-40 138.3 0.0 2.2 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain DHR10 PF18595.1 ORF82199 - 0.088 12.9 35.9 0.44 10.6 7.4 5.0 3 2 1 4 4 4 0 Designed helical repeat protein 10 domain ATG16 PF08614.11 ORF82199 - 0.13 12.4 22.3 0.15 12.3 4.7 2.8 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Fez1 PF06818.15 ORF82199 - 0.67 10.4 21.1 0.05 14.1 1.9 3.1 3 0 0 3 3 3 0 Fez1 SKA2 PF16740.5 ORF82199 - 0.78 9.5 11.1 0.69 9.7 0.8 3.4 2 1 0 2 2 2 0 Spindle and kinetochore-associated protein 2 DUF4407 PF14362.6 ORF82199 - 4.6 6.5 12.7 1.3 8.4 5.5 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) GBP PF02263.19 ORF98551 - 1.5e-65 221.1 0.1 1.5e-65 221.1 0.1 5.5 6 1 0 7 7 7 1 Guanylate-binding protein, N-terminal domain GBP_C PF02841.14 ORF98551 - 2.9e-27 95.9 33.9 2.9e-27 95.9 33.9 11.2 1 1 8 11 11 11 1 Guanylate-binding protein, C-terminal domain Fez1 PF06818.15 ORF98551 - 0.0044 17.5 25.4 0.0044 17.5 25.4 10.5 1 1 10 11 11 11 1 Fez1 ATG16 PF08614.11 ORF98551 - 0.0061 16.8 19.1 0.0061 16.8 19.1 11.3 1 1 7 10 10 10 1 Autophagy protein 16 (ATG16) GBP PF02263.19 ORF72818 - 1e-56 192.1 0.4 1e-56 192.1 0.4 5.6 6 1 0 7 7 7 1 Guanylate-binding protein, N-terminal domain GBP_C PF02841.14 ORF72818 - 1.7e-27 96.7 33.1 1.7e-27 96.7 33.1 11.2 1 1 10 11 11 11 1 Guanylate-binding protein, C-terminal domain Fez1 PF06818.15 ORF72818 - 0.0037 17.7 25.2 0.0037 17.7 25.2 10.5 1 1 9 10 10 10 1 Fez1 PTS_2-RNA PF01885.16 ORF58699 - 0.0005 20.2 0.0 0.00091 19.3 0.0 1.4 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family G8 PF10162.9 ORF63400 - 2.7e-20 72.7 0.0 1.2e-19 70.6 0.0 2.2 1 0 0 1 1 1 1 G8 domain Beta_helix PF13229.6 ORF63400 - 1e-06 28.7 13.2 1e-06 28.7 13.2 5.5 4 1 1 5 5 5 2 Right handed beta helix region NosD PF05048.13 ORF63400 - 5.8e-05 22.5 8.5 5.8e-05 22.5 8.5 4.5 4 1 0 4 4 4 1 Periplasmic copper-binding protein (NosD) LRRCT PF01463.24 ORF148839 - 0.006 17.0 0.6 0.098 13.2 0.6 3.3 1 0 0 1 1 1 1 Leucine rich repeat C-terminal domain LRRCT PF01463.24 ORF71655 - 0.0058 17.1 0.6 0.098 13.2 0.6 3.4 1 0 0 1 1 1 1 Leucine rich repeat C-terminal domain Ion_trans PF00520.31 ORF125200 - 1.4e-08 34.3 24.7 1.4e-08 34.3 24.7 3.1 3 1 0 3 3 3 1 Ion transport protein YajC PF02699.15 ORF125200 - 0.34 10.8 1.7 0.9 9.5 0.1 2.7 2 0 0 2 2 2 0 Preprotein translocase subunit HECT PF00632.25 ORF59384 - 6.1e-58 196.7 0.1 6.1e-58 196.7 0.1 2.3 3 0 0 3 3 3 1 HECT-domain (ubiquitin-transferase) zf-RanBP PF00641.18 ORF59384 - 0.025 13.9 3.4 0.055 12.8 3.4 1.6 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others HECT PF00632.25 ORF1386 - 6.1e-58 196.7 0.1 6.1e-58 196.7 0.1 2.3 3 0 0 3 3 3 1 HECT-domain (ubiquitin-transferase) zf-RanBP PF00641.18 ORF1386 - 0.025 13.9 3.4 0.055 12.8 3.4 1.6 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others UQ_con PF00179.26 ORF16924 - 2e-24 85.8 0.1 5e-24 84.6 0.1 1.7 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme LRR_6 PF13516.6 ORF16924 - 2.2e-14 52.2 21.4 0.0016 18.3 0.1 8.8 9 0 0 9 9 9 4 Leucine Rich repeat LRR_4 PF12799.7 ORF16924 - 0.0027 18.1 1.5 0.0027 18.1 1.5 8.5 7 3 3 10 10 10 4 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF16924 - 0.0036 17.6 15.4 14 6.7 0.0 9.3 10 1 0 10 10 10 1 Leucine Rich Repeat RWD PF05773.22 ORF16924 - 0.012 15.9 0.0 0.041 14.2 0.0 1.9 1 0 0 1 1 1 0 RWD domain Phage_glycop_gL PF11108.8 ORF16924 - 0.7 10.0 3.5 0.26 11.4 0.1 2.0 2 0 0 2 2 2 0 Viral glycoprotein L LRR_8 PF13855.6 ORF16924 - 6 6.7 15.3 2.7 7.8 4.1 5.7 3 1 0 4 4 4 0 Leucine rich repeat DUF4199 PF13858.6 ORF18242 - 0.0035 17.8 3.9 0.0035 17.8 3.9 3.3 3 1 0 3 3 3 1 Protein of unknown function (DUF4199) RNA_pol_Rpb2_6 PF00562.28 ORF152289 - 1.4e-161 537.9 0.1 2.5e-160 533.8 0.3 2.3 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 ORF152289 - 1e-58 198.2 0.0 2.5e-58 196.9 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 ORF152289 - 4.2e-31 106.9 0.0 9.1e-31 105.9 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_45 PF10385.9 ORF152289 - 6.7e-29 100.0 1.1 6.8e-28 96.7 0.3 3.0 3 0 0 3 3 3 1 RNA polymerase beta subunit external 1 domain RNA_pol_Rpb2_7 PF04560.20 ORF152289 - 7.7e-28 96.7 0.1 2.1e-27 95.4 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_2 PF04561.14 ORF152289 - 2.2e-25 89.4 0.9 5.8e-15 55.4 0.1 3.2 3 0 0 3 3 3 2 RNA polymerase Rpb2, domain 2 SPG4 PF17325.2 ORF152289 - 0.043 14.9 0.1 0.17 13.0 0.0 2.0 2 0 0 2 2 2 0 Stationary phase protein 4 Spc7 PF08317.11 ORF152289 - 0.87 8.4 5.7 2.1 7.2 5.7 1.5 1 0 0 1 1 1 0 Spc7 kinetochore protein ASH PF15780.5 ORF133484 - 3.2e-31 107.4 13.2 0.0003 20.9 0.0 10.7 11 1 1 12 12 12 7 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Motile_Sperm PF00635.26 ORF133484 - 4.9e-14 52.1 17.4 0.00011 22.0 0.2 8.2 7 0 0 7 7 7 3 MSP (Major sperm protein) domain DUF1573 PF07610.11 ORF133484 - 3.2e-10 39.9 7.7 0.0017 18.3 0.0 8.3 8 1 1 9 9 9 1 Protein of unknown function (DUF1573) MYCBPAP PF14646.6 ORF133484 - 0.00014 21.0 2.6 0.82 8.5 0.1 4.3 4 2 1 5 5 5 2 MYCBP-associated protein family PapD-like PF14874.6 ORF133484 - 0.00079 19.6 0.0 7.1 6.9 0.0 4.2 5 0 0 5 5 5 2 Flagellar-associated PapD-like TMEM131_like PF12371.8 ORF133484 - 0.0015 18.7 8.2 0.98 9.7 0.0 6.2 7 0 0 7 7 7 1 Transmembrane protein 131-like FixG_C PF11614.8 ORF133484 - 0.029 14.6 3.5 4.5 7.5 0.1 4.7 5 0 0 5 5 5 0 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF4402 PF14352.6 ORF133484 - 0.1 13.3 0.0 0.57 10.8 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4402) DUF5001 PF16392.5 ORF133484 - 0.53 10.2 12.9 3.1 7.8 0.1 6.4 7 0 0 7 7 7 0 Ig-like domain DUF916 PF06030.12 ORF133484 - 2.4 8.2 5.4 43 4.2 0.0 4.4 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF916) UQ_con PF00179.26 ORF107018 - 3.6e-14 52.6 0.0 8e-14 51.5 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme LRR_6 PF13516.6 ORF107018 - 2.4e-08 33.4 7.7 4.3 7.6 0.1 7.6 8 0 0 8 8 8 3 Leucine Rich repeat LRR_1 PF00560.33 ORF107018 - 8.6e-05 22.6 14.1 6.4 7.7 0.1 8.6 9 0 0 9 9 9 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF107018 - 0.00011 22.5 17.8 0.64 10.5 0.0 7.5 5 1 2 7 7 7 3 Leucine Rich repeats (2 copies) RRM_1 PF00076.22 ORF107018 - 0.056 13.3 0.3 0.32 10.8 0.3 2.3 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LRR_8 PF13855.6 ORF107018 - 0.27 11.1 17.3 0.64 9.8 0.0 6.0 5 2 1 6 6 6 0 Leucine rich repeat Dynein_C PF18199.1 ORF132572 - 2.1e-108 362.2 0.0 4.5e-108 361.1 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF132572 - 2.5e-77 258.9 1.3 2.5e-77 258.9 1.3 2.8 2 0 0 2 2 2 1 ATP-binding dynein motor region AAA_lid_11 PF18198.1 ORF132572 - 4.1e-56 189.3 0.1 1e-55 188.0 0.1 1.7 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF132572 - 1e-45 154.7 0.0 3.4e-42 143.3 0.1 3.5 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF132572 - 3.2e-28 98.8 3.7 5.6e-28 97.9 3.7 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Laminin_I PF06008.14 ORF132572 - 0.00012 21.9 9.7 0.00012 21.9 9.7 2.0 2 0 0 2 2 1 1 Laminin Domain I Prefoldin PF02996.17 ORF132572 - 0.00079 19.3 3.1 0.00079 19.3 3.1 3.2 2 1 1 3 3 2 1 Prefoldin subunit ATG16 PF08614.11 ORF132572 - 0.0079 16.4 9.5 0.0079 16.4 9.5 2.3 3 0 0 3 3 3 1 Autophagy protein 16 (ATG16) DHR10 PF18595.1 ORF132572 - 0.069 13.2 17.5 0.018 15.1 13.3 2.3 2 0 0 2 2 1 0 Designed helical repeat protein 10 domain Spc7 PF08317.11 ORF132572 - 0.086 11.7 19.0 0.0066 15.4 8.7 3.1 3 0 0 3 3 3 0 Spc7 kinetochore protein BRE1 PF08647.11 ORF132572 - 0.13 12.4 24.4 0.02 15.0 16.2 3.1 2 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase rve_3 PF13683.6 ORF132572 - 0.16 11.8 0.2 0.7 9.7 0.0 2.2 2 0 0 2 2 1 0 Integrase core domain DUF3584 PF12128.8 ORF132572 - 0.21 9.1 16.0 0.14 9.6 8.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) BLOC1_2 PF10046.9 ORF132572 - 0.22 11.8 10.7 0.71 10.2 3.4 3.3 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FERM_M PF00373.18 ORF132572 - 0.24 11.8 0.9 0.64 10.4 0.3 2.2 2 1 0 2 2 1 0 FERM central domain APG17 PF04108.12 ORF132572 - 0.29 10.2 11.5 0.019 14.1 4.3 2.3 3 0 0 3 3 3 0 Autophagy protein Apg17 Laminin_II PF06009.12 ORF132572 - 0.44 10.6 13.2 0.043 13.8 5.5 3.0 3 0 0 3 3 3 0 Laminin Domain II DUF4164 PF13747.6 ORF132572 - 0.48 10.7 7.6 1.9 8.8 7.6 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) MIEAP PF16026.5 ORF132572 - 0.81 9.9 5.0 0.45 10.7 0.8 2.6 3 0 0 3 3 3 0 Mitochondria-eating protein KxDL PF10241.9 ORF132572 - 1.2 9.5 7.5 1.1 9.6 1.5 3.5 2 1 0 2 2 2 0 Uncharacterized conserved protein Sec8_exocyst PF04048.14 ORF132572 - 1.4 8.8 10.7 0.33 10.8 0.4 3.5 2 1 1 3 3 3 0 Sec8 exocyst complex component specific domain Sec34 PF04136.15 ORF132572 - 2.1 8.2 8.3 0.89 9.4 3.2 2.6 2 0 0 2 2 2 0 Sec34-like family DUF948 PF06103.11 ORF132572 - 3.2 8.1 5.0 4.4 7.6 0.7 3.0 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 ORF132572 - 3.3 7.8 7.5 8.5 6.4 1.7 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) AAA_13 PF13166.6 ORF132572 - 3.3 6.2 16.3 7.4 5.1 8.8 3.1 3 0 0 3 3 3 0 AAA domain DUF2229 PF09989.9 ORF132572 - 4.5 6.9 6.9 2 8.0 3.4 2.1 2 0 0 2 2 2 0 CoA enzyme activase uncharacterised domain (DUF2229) DUF3435 PF11917.8 ORF132572 - 4.5 6.1 8.3 8.6 5.2 8.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) DUF4201 PF13870.6 ORF132572 - 5.1 6.8 20.9 0.032 14.0 8.9 2.8 2 1 0 2 2 1 0 Domain of unknown function (DUF4201) Cep57_CLD_2 PF14197.6 ORF132572 - 6.8 6.9 14.7 0.3 11.2 8.5 2.1 2 0 0 2 2 1 0 Centrosome localisation domain of PPC89 AAA_30 PF13604.6 ORF71654 - 7e-15 55.2 0.0 1.4e-14 54.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF71654 - 8.6e-07 28.9 0.5 0.011 15.5 0.0 2.7 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase HNH PF01844.23 ORF71654 - 6.5e-06 26.2 0.0 1.4e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 HNH endonuclease AAA_19 PF13245.6 ORF71654 - 8.2e-05 23.0 0.3 0.0044 17.4 0.3 2.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF71654 - 0.00028 21.3 0.1 0.0012 19.3 0.1 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 ORF71654 - 0.00042 20.2 0.3 0.05 13.4 0.1 2.2 1 1 1 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF71654 - 0.00056 19.4 0.1 0.001 18.5 0.1 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI HNH_5 PF14279.6 ORF71654 - 0.0014 18.4 0.1 0.003 17.4 0.1 1.5 1 0 0 1 1 1 1 HNH endonuclease AAA PF00004.29 ORF71654 - 0.0019 18.6 0.0 0.0039 17.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PIF1 PF05970.14 ORF71654 - 0.0046 16.2 0.0 0.082 12.1 0.0 2.1 2 0 0 2 2 2 1 PIF1-like helicase AAA_22 PF13401.6 ORF71654 - 0.0058 16.9 0.2 0.032 14.5 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF71654 - 0.012 15.7 0.0 0.031 14.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.10 ORF71654 - 0.012 15.0 0.0 0.029 13.8 0.0 1.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 NB-ARC PF00931.22 ORF71654 - 0.014 14.6 0.0 0.025 13.8 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain ATPase PF06745.13 ORF71654 - 0.029 13.7 0.0 0.048 13.0 0.0 1.2 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 ORF71654 - 0.03 14.0 0.0 0.06 13.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 ORF71654 - 0.076 12.2 0.1 0.12 11.6 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 ORF71654 - 0.094 12.6 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 ORF71654 - 0.1 12.6 0.0 0.34 10.9 0.0 1.9 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF71654 - 0.12 13.0 0.1 0.32 11.5 0.1 1.8 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF71654 - 0.17 11.9 0.0 0.36 10.8 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Herpes_Helicase PF02689.14 ORF71654 - 0.29 9.0 0.0 0.56 8.1 0.0 1.3 1 0 0 1 1 1 0 Helicase AAA_30 PF13604.6 ORF148838 - 7e-15 55.2 0.0 1.4e-14 54.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF148838 - 8.6e-07 28.9 0.5 0.011 15.5 0.0 2.7 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase HNH PF01844.23 ORF148838 - 6.5e-06 26.2 0.0 1.4e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 HNH endonuclease AAA_19 PF13245.6 ORF148838 - 8.2e-05 23.0 0.3 0.0044 17.4 0.3 2.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF148838 - 0.00028 21.3 0.1 0.0012 19.3 0.1 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 ORF148838 - 0.00042 20.2 0.3 0.05 13.4 0.1 2.2 1 1 1 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF148838 - 0.00056 19.4 0.1 0.001 18.5 0.1 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI HNH_5 PF14279.6 ORF148838 - 0.0014 18.4 0.1 0.003 17.4 0.1 1.5 1 0 0 1 1 1 1 HNH endonuclease AAA PF00004.29 ORF148838 - 0.0019 18.6 0.0 0.0039 17.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PIF1 PF05970.14 ORF148838 - 0.0046 16.2 0.0 0.082 12.1 0.0 2.1 2 0 0 2 2 2 1 PIF1-like helicase AAA_22 PF13401.6 ORF148838 - 0.0058 16.9 0.2 0.032 14.5 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF148838 - 0.012 15.7 0.0 0.031 14.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.10 ORF148838 - 0.012 15.0 0.0 0.029 13.8 0.0 1.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 NB-ARC PF00931.22 ORF148838 - 0.014 14.6 0.0 0.025 13.8 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain ATPase PF06745.13 ORF148838 - 0.029 13.7 0.0 0.048 13.0 0.0 1.2 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 ORF148838 - 0.03 14.0 0.0 0.06 13.1 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 ORF148838 - 0.076 12.2 0.1 0.12 11.6 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 ORF148838 - 0.094 12.6 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 ORF148838 - 0.1 12.6 0.0 0.34 10.9 0.0 1.9 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF148838 - 0.12 13.0 0.1 0.32 11.5 0.1 1.8 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF148838 - 0.17 11.9 0.0 0.36 10.8 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Herpes_Helicase PF02689.14 ORF148838 - 0.29 9.0 0.0 0.56 8.1 0.0 1.3 1 0 0 1 1 1 0 Helicase ABC_membrane PF00664.23 ORF104514 - 8.8e-90 301.1 29.0 1.5e-49 169.1 4.2 2.1 2 0 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 ORF104514 - 1.4e-72 242.7 0.1 2.6e-37 128.4 0.0 2.9 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 ORF104514 - 1.9e-14 53.7 14.6 1.7e-06 27.7 0.1 4.7 4 2 1 5 5 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF104514 - 4.4e-09 35.9 0.7 0.0012 18.5 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF104514 - 1.3e-08 35.4 0.1 0.01 16.2 0.0 2.9 2 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 ORF104514 - 4e-08 33.6 0.3 0.003 17.8 0.2 4.1 3 1 0 3 3 3 2 AAA domain RsgA_GTPase PF03193.16 ORF104514 - 4e-08 33.3 0.0 0.001 19.0 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_15 PF13175.6 ORF104514 - 2.8e-07 30.6 15.7 0.011 15.4 11.6 3.2 2 1 0 2 2 2 2 AAA ATPase domain SbcCD_C PF13558.6 ORF104514 - 4.1e-06 26.9 4.7 0.024 14.9 0.3 4.1 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 ORF104514 - 5e-06 26.5 4.9 0.085 12.7 0.0 4.1 3 1 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 ORF104514 - 1.7e-05 24.6 0.0 0.12 12.1 0.0 3.4 3 1 0 3 3 3 2 AAA domain G-alpha PF00503.20 ORF104514 - 2.2e-05 23.8 0.3 0.16 11.1 0.1 2.4 2 0 0 2 2 2 2 G-protein alpha subunit AAA_7 PF12775.7 ORF104514 - 2.5e-05 23.9 0.0 0.18 11.3 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region Zeta_toxin PF06414.12 ORF104514 - 0.00014 21.2 3.5 0.12 11.7 0.0 3.4 4 0 0 4 4 4 2 Zeta toxin AAA_18 PF13238.6 ORF104514 - 0.00023 21.7 0.2 1.2 9.7 0.0 3.3 3 0 0 3 3 2 2 AAA domain AAA_33 PF13671.6 ORF104514 - 0.00066 19.9 0.0 0.76 9.9 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 ORF104514 - 0.00066 19.7 0.0 2.5 8.1 0.0 3.4 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) ABC_ATPase PF09818.9 ORF104514 - 0.0012 17.7 0.1 0.79 8.4 0.0 3.2 3 0 0 3 3 3 1 Predicted ATPase of the ABC class Rad17 PF03215.15 ORF104514 - 0.0014 18.6 0.0 0.51 10.2 0.0 2.6 2 0 0 2 2 2 1 Rad17 P-loop domain DUF87 PF01935.17 ORF104514 - 0.0015 18.7 2.1 3.4 7.7 0.0 3.6 3 0 0 3 3 3 1 Helicase HerA, central domain APS_kinase PF01583.20 ORF104514 - 0.0016 18.3 0.0 1.6 8.6 0.0 2.7 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA_25 PF13481.6 ORF104514 - 0.0017 18.0 2.9 5.7 6.5 0.1 4.0 4 0 0 4 4 4 0 AAA domain AAA_10 PF12846.7 ORF104514 - 0.0021 17.0 1.1 0.098 11.6 0.0 3.1 3 0 0 3 3 3 1 AAA-like domain MMR_HSR1 PF01926.23 ORF104514 - 0.003 17.6 0.1 1.6 8.8 0.0 3.3 3 0 0 3 3 3 1 50S ribosome-binding GTPase AAA PF00004.29 ORF104514 - 0.0067 16.9 8.0 1 9.8 0.3 4.6 4 1 0 4 4 3 1 ATPase family associated with various cellular activities (AAA) ATP_bind_1 PF03029.17 ORF104514 - 0.0083 15.9 0.0 3.4 7.4 0.0 2.6 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein DUF365 PF04033.12 ORF104514 - 0.011 16.0 0.0 0.19 12.1 0.0 3.0 3 0 0 3 3 2 0 Domain of unknown function (DUF365) AAA_24 PF13479.6 ORF104514 - 0.016 14.9 3.6 4 7.1 0.0 3.8 4 0 0 4 4 3 0 AAA domain DUF815 PF05673.13 ORF104514 - 0.016 14.4 0.0 3.5 6.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF815) IstB_IS21 PF01695.17 ORF104514 - 0.016 14.9 5.1 18 5.0 0.1 4.4 4 1 0 4 4 4 0 IstB-like ATP binding protein RNA_helicase PF00910.22 ORF104514 - 0.02 15.3 0.2 9.1 6.7 0.0 3.4 3 0 0 3 3 2 0 RNA helicase Gtr1_RagA PF04670.12 ORF104514 - 0.022 14.1 0.0 8.4 5.7 0.0 2.7 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region SRP54 PF00448.22 ORF104514 - 0.044 13.4 0.0 2.5 7.7 0.0 2.7 3 0 0 3 3 2 0 SRP54-type protein, GTPase domain NB-ARC PF00931.22 ORF104514 - 0.052 12.7 0.1 4.5 6.4 0.0 2.6 2 0 0 2 2 2 0 NB-ARC domain PRK PF00485.18 ORF104514 - 0.059 13.1 0.0 5.3 6.7 0.0 2.5 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Roc PF08477.13 ORF104514 - 0.062 13.5 0.0 37 4.6 0.0 3.5 3 0 0 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase MeaB PF03308.16 ORF104514 - 0.084 11.8 0.0 3.2 6.7 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DEAD PF00270.29 ORF104514 - 0.095 12.5 0.2 19 4.9 0.0 3.7 4 0 0 4 4 4 0 DEAD/DEAH box helicase AAA_28 PF13521.6 ORF104514 - 0.11 12.7 0.0 11 6.2 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF104514 - 0.24 11.9 0.1 0.24 11.9 0.1 3.8 3 1 0 3 3 2 0 AAA domain Coilin_N PF15862.5 ORF104514 - 1.4 8.7 6.1 2.8 7.8 6.1 1.4 1 0 0 1 1 1 0 Coilin N-terminus RNA_pol_Rpb1_5 PF04998.17 ORF6024 - 3.2e-78 262.9 0.0 5.1e-78 262.2 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.12 ORF6024 - 1.6e-65 221.5 0.0 2.9e-65 220.7 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 ORF6024 - 1.1e-37 129.8 0.1 3.8e-27 95.5 0.0 2.9 2 1 1 3 3 3 2 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 ORF6024 - 1.9e-27 96.1 0.0 4.6e-27 94.9 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 ORF6024 - 1.3e-18 66.9 0.3 1.3e-18 66.9 0.3 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 Peptidase_M23 PF01551.22 ORF6024 - 0.0065 16.7 0.0 1.5 9.0 0.0 3.8 4 0 0 4 4 4 1 Peptidase family M23 GATase_5 PF13507.6 ORF72903 - 4e-105 350.6 0.0 6.4e-105 349.9 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain FGAR-AT_N PF18076.1 ORF72903 - 2.4e-45 153.2 0.0 5.1e-45 152.2 0.0 1.6 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase N-terminal AIRS_C PF02769.22 ORF72903 - 3.4e-42 144.2 2.0 9.1e-26 90.8 0.0 2.4 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain FGAR-AT_linker PF18072.1 ORF72903 - 1.2e-23 83.4 0.0 4.3e-23 81.6 0.0 2.1 2 0 0 2 2 2 1 Formylglycinamide ribonucleotide amidotransferase linker domain AIRS PF00586.24 ORF72903 - 0.027 15.1 0.6 0.75 10.5 0.0 3.3 3 0 0 3 3 3 0 AIR synthase related protein, N-terminal domain Kinesin PF00225.23 ORF45867 - 5.1e-113 377.4 2.3 5.1e-113 377.4 2.3 5.7 3 2 0 5 5 5 1 Kinesin motor domain Microtub_bd PF16796.5 ORF45867 - 5e-26 91.4 0.1 5e-26 91.4 0.1 6.0 5 1 0 5 5 5 1 Microtubule binding TFCD_C PF12612.8 ORF25884 - 3.5e-44 150.9 0.5 2.1e-42 145.1 0.0 3.3 2 0 0 2 2 2 1 Tubulin folding cofactor D C terminal HEAT PF02985.22 ORF25884 - 1.1e-06 28.4 0.5 0.07 13.4 0.0 6.3 8 0 0 8 8 8 1 HEAT repeat Vac14_Fab1_bd PF12755.7 ORF25884 - 0.0037 17.8 8.4 5.9 7.6 0.0 6.8 6 1 1 7 7 7 2 Vacuolar 14 Fab1-binding region HEAT_2 PF13646.6 ORF25884 - 0.011 16.1 0.0 0.35 11.3 0.0 3.4 4 0 0 4 4 4 0 HEAT repeats RTP1_C1 PF10363.9 ORF25884 - 0.064 13.4 0.0 0.45 10.7 0.0 2.5 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 ABC_tran PF00005.27 ORF38290 - 6e-69 230.9 0.2 6.8e-36 123.8 0.0 2.7 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 ORF38290 - 4e-63 213.6 18.5 2.9e-38 132.1 2.5 2.3 2 0 0 2 2 2 2 ABC transporter transmembrane region SMC_N PF02463.19 ORF38290 - 7.1e-17 61.6 0.6 1.8e-07 30.8 0.0 3.5 3 0 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF38290 - 1.8e-10 41.4 0.7 0.0012 19.2 0.4 3.1 3 1 0 3 3 2 2 AAA ATPase domain AAA_22 PF13401.6 ORF38290 - 1.2e-08 35.3 2.5 0.011 16.0 0.4 4.5 4 1 0 4 4 3 2 AAA domain AAA_29 PF13555.6 ORF38290 - 1.6e-08 34.2 0.3 0.00032 20.4 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF38290 - 1.8e-07 31.2 0.7 0.0045 16.9 0.0 2.8 3 0 0 3 3 2 2 RsgA GTPase AAA_15 PF13175.6 ORF38290 - 1.9e-06 27.8 10.6 0.00089 19.1 8.4 3.1 2 1 0 2 2 2 2 AAA ATPase domain AAA_5 PF07728.14 ORF38290 - 2.6e-06 27.5 0.4 0.095 12.7 0.0 3.9 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 ORF38290 - 8.7e-06 25.1 0.1 0.091 12.0 0.0 2.8 2 0 0 2 2 2 2 Zeta toxin AAA_25 PF13481.6 ORF38290 - 2.4e-05 24.0 0.7 0.4 10.2 0.0 3.5 3 0 0 3 3 3 1 AAA domain DUF815 PF05673.13 ORF38290 - 2.4e-05 23.6 0.0 0.015 14.4 0.0 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF815) SbcCD_C PF13558.6 ORF38290 - 2.9e-05 24.2 2.8 0.23 11.7 0.4 4.1 3 2 0 3 3 2 2 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 ORF38290 - 4.3e-05 23.5 2.0 0.13 12.1 0.1 3.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 ORF38290 - 5.9e-05 23.6 0.1 0.35 11.4 0.0 3.3 3 0 0 3 3 2 2 AAA domain Rad17 PF03215.15 ORF38290 - 7.8e-05 22.7 0.1 0.67 9.8 0.0 2.8 3 0 0 3 3 2 2 Rad17 P-loop domain ABC_ATPase PF09818.9 ORF38290 - 0.00018 20.4 1.0 0.039 12.7 0.0 3.1 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA PF00004.29 ORF38290 - 0.00024 21.5 5.2 3.8 7.9 0.6 4.7 3 2 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 ORF38290 - 0.00064 19.0 0.1 0.11 11.6 0.0 2.3 2 0 0 2 2 2 1 G-protein alpha subunit AAA_30 PF13604.6 ORF38290 - 0.0011 18.7 0.6 0.39 10.4 0.0 3.4 3 1 0 3 3 3 1 AAA domain AAA_24 PF13479.6 ORF38290 - 0.0019 18.0 0.0 1.8 8.2 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 ORF38290 - 0.0024 17.9 0.4 4.3 7.4 0.0 3.7 2 1 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF38290 - 0.0028 18.0 0.7 3.1 8.2 0.0 3.1 3 0 0 3 3 2 1 RNA helicase AAA_7 PF12775.7 ORF38290 - 0.0036 16.8 0.1 2.7 7.4 0.0 2.6 2 0 0 2 2 2 1 P-loop containing dynein motor region PRK PF00485.18 ORF38290 - 0.0048 16.7 1.5 0.19 11.5 0.0 3.0 3 0 0 3 3 2 1 Phosphoribulokinase / Uridine kinase family Viral_helicase1 PF01443.18 ORF38290 - 0.0051 16.6 0.2 1.4 8.6 0.0 2.8 3 0 0 3 3 2 1 Viral (Superfamily 1) RNA helicase AAA_33 PF13671.6 ORF38290 - 0.0052 16.9 0.0 0.85 9.8 0.0 2.7 3 0 0 3 3 2 1 AAA domain MMR_HSR1 PF01926.23 ORF38290 - 0.006 16.7 0.1 1.3 9.1 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP-synt_ab PF00006.25 ORF38290 - 0.012 15.3 0.0 0.71 9.5 0.0 2.6 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_23 PF13476.6 ORF38290 - 0.017 15.7 16.8 0.047 14.2 0.0 4.4 4 1 0 4 4 3 0 AAA domain TniB PF05621.11 ORF38290 - 0.019 14.4 0.7 9.3 5.6 0.1 3.9 4 0 0 4 4 4 0 Bacterial TniB protein MoaE PF02391.17 ORF38290 - 0.039 14.2 0.3 6.4 7.1 0.0 2.7 2 0 0 2 2 2 0 MoaE protein MeaB PF03308.16 ORF38290 - 0.042 12.8 0.2 3.1 6.7 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF87 PF01935.17 ORF38290 - 0.068 13.2 5.3 1.7 8.7 0.1 3.6 5 0 0 5 5 3 0 Helicase HerA, central domain DEAD PF00270.29 ORF38290 - 0.07 12.9 1.8 2.7 7.7 0.1 3.3 3 1 0 3 3 3 0 DEAD/DEAH box helicase NB-ARC PF00931.22 ORF38290 - 0.098 11.8 0.6 14 4.8 0.0 2.9 3 0 0 3 3 3 0 NB-ARC domain TssN PF17555.2 ORF38290 - 0.11 11.8 9.2 1.5 8.1 0.8 3.4 3 0 0 3 3 3 0 Type VI secretion system, TssN AAA_28 PF13521.6 ORF38290 - 0.15 12.3 0.2 32 4.7 0.0 3.4 3 0 0 3 3 3 0 AAA domain ATPase PF06745.13 ORF38290 - 0.31 10.4 3.1 8.2 5.7 0.0 3.1 3 0 0 3 3 3 0 KaiC NTPase_1 PF03266.15 ORF38290 - 0.41 10.5 2.4 7.1 6.5 0.0 3.4 4 0 0 4 4 4 0 NTPase NACHT PF05729.12 ORF38290 - 0.41 10.5 4.2 4.8 7.1 0.0 3.2 4 0 0 4 4 3 0 NACHT domain Mak16 PF04874.14 ORF38290 - 3.8 8.2 12.8 1 10.0 7.4 2.7 2 0 0 2 2 2 0 Mak16 protein C-terminal region CitMHS PF03600.16 ORF38290 - 6.5 5.8 9.0 0.24 10.6 0.4 2.4 2 1 0 2 2 2 0 Citrate transporter ABC_tran PF00005.27 ORF142054 - 6e-69 230.9 0.2 6.8e-36 123.8 0.0 2.7 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 ORF142054 - 4e-63 213.6 18.5 2.9e-38 132.1 2.5 2.3 2 0 0 2 2 2 2 ABC transporter transmembrane region SMC_N PF02463.19 ORF142054 - 7.1e-17 61.6 0.6 1.8e-07 30.8 0.0 3.5 3 0 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF142054 - 1.8e-10 41.4 0.7 0.0012 19.2 0.4 3.1 3 1 0 3 3 2 2 AAA ATPase domain AAA_22 PF13401.6 ORF142054 - 1.2e-08 35.3 2.5 0.011 16.0 0.4 4.5 4 1 0 4 4 3 2 AAA domain AAA_29 PF13555.6 ORF142054 - 1.6e-08 34.2 0.3 0.00032 20.4 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF142054 - 1.8e-07 31.2 0.7 0.0045 16.9 0.0 2.8 3 0 0 3 3 2 2 RsgA GTPase AAA_15 PF13175.6 ORF142054 - 1.9e-06 27.8 10.6 0.00089 19.1 8.4 3.1 2 1 0 2 2 2 2 AAA ATPase domain AAA_5 PF07728.14 ORF142054 - 2.6e-06 27.5 0.4 0.095 12.7 0.0 3.9 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 ORF142054 - 8.7e-06 25.1 0.1 0.091 12.0 0.0 2.8 2 0 0 2 2 2 2 Zeta toxin AAA_25 PF13481.6 ORF142054 - 2.4e-05 24.0 0.7 0.4 10.2 0.0 3.5 3 0 0 3 3 3 1 AAA domain DUF815 PF05673.13 ORF142054 - 2.4e-05 23.6 0.0 0.015 14.4 0.0 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF815) SbcCD_C PF13558.6 ORF142054 - 2.9e-05 24.2 2.8 0.23 11.7 0.4 4.1 3 2 0 3 3 2 2 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 ORF142054 - 4.3e-05 23.5 2.0 0.13 12.1 0.1 3.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 ORF142054 - 5.9e-05 23.6 0.1 0.35 11.4 0.0 3.3 3 0 0 3 3 2 2 AAA domain Rad17 PF03215.15 ORF142054 - 7.8e-05 22.7 0.1 0.67 9.8 0.0 2.8 3 0 0 3 3 2 2 Rad17 P-loop domain ABC_ATPase PF09818.9 ORF142054 - 0.00018 20.4 1.0 0.039 12.7 0.0 3.1 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA PF00004.29 ORF142054 - 0.00024 21.5 5.2 3.8 7.9 0.6 4.7 3 2 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 ORF142054 - 0.00064 19.0 0.1 0.11 11.6 0.0 2.3 2 0 0 2 2 2 1 G-protein alpha subunit AAA_30 PF13604.6 ORF142054 - 0.0011 18.7 0.6 0.39 10.4 0.0 3.4 3 1 0 3 3 3 1 AAA domain AAA_24 PF13479.6 ORF142054 - 0.0019 18.0 0.0 1.8 8.2 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 ORF142054 - 0.0024 17.9 0.4 4.3 7.4 0.0 3.7 2 1 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF142054 - 0.0028 18.0 0.7 3.1 8.2 0.0 3.1 3 0 0 3 3 2 1 RNA helicase AAA_7 PF12775.7 ORF142054 - 0.0036 16.8 0.1 2.7 7.4 0.0 2.6 2 0 0 2 2 2 1 P-loop containing dynein motor region PRK PF00485.18 ORF142054 - 0.0048 16.7 1.5 0.19 11.5 0.0 3.0 3 0 0 3 3 2 1 Phosphoribulokinase / Uridine kinase family Viral_helicase1 PF01443.18 ORF142054 - 0.0051 16.6 0.2 1.4 8.6 0.0 2.8 3 0 0 3 3 2 1 Viral (Superfamily 1) RNA helicase AAA_33 PF13671.6 ORF142054 - 0.0052 16.9 0.0 0.85 9.8 0.0 2.7 3 0 0 3 3 2 1 AAA domain MMR_HSR1 PF01926.23 ORF142054 - 0.006 16.7 0.1 1.3 9.1 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP-synt_ab PF00006.25 ORF142054 - 0.012 15.3 0.0 0.71 9.5 0.0 2.6 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_23 PF13476.6 ORF142054 - 0.017 15.7 16.8 0.047 14.2 0.0 4.4 4 1 0 4 4 3 0 AAA domain TniB PF05621.11 ORF142054 - 0.019 14.4 0.7 9.3 5.6 0.1 3.9 4 0 0 4 4 4 0 Bacterial TniB protein MoaE PF02391.17 ORF142054 - 0.039 14.2 0.3 6.4 7.1 0.0 2.7 2 0 0 2 2 2 0 MoaE protein MeaB PF03308.16 ORF142054 - 0.042 12.8 0.2 3.1 6.7 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF87 PF01935.17 ORF142054 - 0.068 13.2 5.3 1.7 8.7 0.1 3.6 5 0 0 5 5 3 0 Helicase HerA, central domain DEAD PF00270.29 ORF142054 - 0.07 12.9 1.8 2.7 7.7 0.1 3.3 3 1 0 3 3 3 0 DEAD/DEAH box helicase NB-ARC PF00931.22 ORF142054 - 0.098 11.8 0.6 14 4.8 0.0 2.9 3 0 0 3 3 3 0 NB-ARC domain TssN PF17555.2 ORF142054 - 0.11 11.8 9.2 1.5 8.1 0.8 3.4 3 0 0 3 3 3 0 Type VI secretion system, TssN AAA_28 PF13521.6 ORF142054 - 0.15 12.3 0.2 32 4.7 0.0 3.4 3 0 0 3 3 3 0 AAA domain ATPase PF06745.13 ORF142054 - 0.31 10.4 3.1 8.2 5.7 0.0 3.1 3 0 0 3 3 3 0 KaiC NTPase_1 PF03266.15 ORF142054 - 0.41 10.5 2.4 7.1 6.5 0.0 3.4 4 0 0 4 4 4 0 NTPase NACHT PF05729.12 ORF142054 - 0.41 10.5 4.2 4.8 7.1 0.0 3.2 4 0 0 4 4 3 0 NACHT domain Mak16 PF04874.14 ORF142054 - 3.8 8.2 12.8 1 10.0 7.4 2.7 2 0 0 2 2 2 0 Mak16 protein C-terminal region CitMHS PF03600.16 ORF142054 - 6.5 5.8 9.0 0.24 10.6 0.4 2.4 2 1 0 2 2 2 0 Citrate transporter rve PF00665.26 ORF114073 - 0.0015 18.7 0.0 0.0043 17.2 0.0 1.9 1 0 0 1 1 1 1 Integrase core domain RAMP PF04901.13 ORF114073 - 0.061 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Receptor activity modifying family Kinesin PF00225.23 ORF33127 - 3.5e-104 348.3 0.1 3.5e-104 348.3 0.1 2.8 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF33127 - 6.5e-20 71.6 0.1 6.5e-20 71.6 0.1 4.1 3 2 0 3 3 3 1 Microtubule binding Kinesin_assoc PF16183.5 ORF33127 - 5.2e-05 23.5 0.3 5.2e-05 23.5 0.3 5.4 2 2 2 4 4 4 2 Kinesin-associated KIF1B PF12423.8 ORF33127 - 0.0022 18.4 0.1 0.022 15.2 0.1 2.9 1 0 0 1 1 1 1 Kinesin protein 1B EF-hand_1 PF00036.32 ORF91209 - 0.00033 20.0 1.5 0.0016 17.9 0.3 2.9 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF91209 - 0.0018 18.6 0.2 0.0018 18.6 0.2 4.4 4 0 0 4 4 4 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF91209 - 0.0065 16.3 1.2 0.054 13.4 0.1 3.2 3 1 0 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 ORF91209 - 0.0076 15.7 1.1 0.017 14.6 0.1 2.2 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF91209 - 0.014 15.3 0.7 0.12 12.3 0.7 2.7 1 0 0 1 1 1 0 EF-hand domain pair Glyco_hydro_31 PF01055.26 ORF31852 - 4.3e-166 553.5 15.2 5e-121 405.0 7.0 2.5 3 0 0 3 3 3 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF31852 - 2.4e-06 27.8 0.0 1e-05 25.8 0.0 2.2 1 0 0 1 1 1 1 Galactose mutarotase-like NtCtMGAM_N PF16863.5 ORF31852 - 0.0017 18.6 3.0 0.0041 17.3 0.5 2.4 2 0 0 2 2 2 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase TRP_N PF14558.6 ORF31852 - 0.18 12.2 2.0 0.49 10.8 2.0 1.7 1 0 0 1 1 1 0 ML-like domain Glyco_hydro_31 PF01055.26 ORF77691 - 4.4e-166 553.5 15.3 5e-121 405.0 7.0 2.5 3 0 0 3 3 3 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF77691 - 2.5e-06 27.7 0.0 1e-05 25.8 0.0 2.2 1 0 0 1 1 1 1 Galactose mutarotase-like NtCtMGAM_N PF16863.5 ORF77691 - 0.0018 18.5 3.1 0.004 17.3 0.5 2.4 2 0 0 2 2 2 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase TRP_N PF14558.6 ORF77691 - 0.18 12.2 2.0 0.49 10.8 2.0 1.7 1 0 0 1 1 1 0 ML-like domain WD40 PF00400.32 ORF151371 - 2.5e-11 43.9 10.1 2.1e-06 28.3 0.1 6.4 7 0 0 7 7 7 2 WD domain, G-beta repeat Coatomer_WDAD PF04053.14 ORF151371 - 1.2e-08 34.5 7.8 0.0012 18.0 0.2 4.7 4 1 2 6 6 6 3 Coatomer WD associated region ANAPC4_WD40 PF12894.7 ORF151371 - 4.7e-07 30.0 0.1 0.0045 17.3 0.0 5.1 5 1 1 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain Clathrin PF00637.20 ORF151371 - 2.7e-06 27.3 7.5 0.12 12.2 0.1 4.2 2 1 2 4 4 4 3 Region in Clathrin and VPS TPR_2 PF07719.17 ORF151371 - 0.0018 18.3 10.5 10 6.5 1.4 5.7 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF151371 - 0.052 13.6 1.6 5.4 7.3 0.0 4.3 4 2 1 5 5 4 0 Tetratricopeptide repeat WD40_like PF17005.5 ORF151371 - 0.081 12.2 4.2 0.37 10.1 0.5 3.3 2 1 1 3 3 3 0 WD40-like domain SNAP PF14938.6 ORF151371 - 0.089 12.2 4.0 2.8 7.3 0.1 2.5 1 1 0 2 2 2 0 Soluble NSF attachment protein, SNAP WD40_3 PF15911.5 ORF151371 - 0.1 12.6 0.2 2.3 8.3 0.0 3.1 3 0 0 3 3 3 0 WD domain, G-beta repeat ANAPC3 PF12895.7 ORF151371 - 0.54 10.5 8.4 13 6.1 0.2 4.2 3 1 0 4 4 3 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_1 PF00515.28 ORF151371 - 1.4 8.9 12.3 7 6.6 0.3 4.8 4 1 1 5 5 5 0 Tetratricopeptide repeat MIT PF04212.18 ORF151371 - 2.6 8.2 8.1 0.27 11.4 0.3 3.4 4 1 0 4 4 4 0 MIT (microtubule interacting and transport) domain DUF4215 PF13948.6 ORF111871 - 5.3e-09 36.4 34.3 7.7e-06 26.2 14.9 7.6 7 2 1 8 8 8 3 Domain of unknown function (DUF4215) Rad50_zn_hook PF04423.14 ORF111871 - 1.4 8.8 4.1 0.68 9.8 0.1 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif Glyco_hydro_67N PF03648.14 ORF8588 - 0.12 12.7 2.6 0.58 10.5 2.6 2.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 N-terminus RNA_pol_Rpb1_5 PF04998.17 ORF69441 - 4.8e-99 331.1 0.9 1e-98 330.1 0.9 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_6 PF04992.14 ORF69441 - 2.1e-47 161.4 3.7 4.9e-47 160.2 3.7 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 6 RNA_pol_Rpb1_3 PF04983.18 ORF69441 - 2.1e-45 154.5 0.0 8.1e-45 152.6 0.0 2.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 ORF69441 - 3.7e-36 123.4 0.0 1.5e-35 121.4 0.0 2.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_7 PF04990.12 ORF69441 - 1.1e-28 99.9 5.3 1.1e-28 99.9 5.3 2.2 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 7 Dynein_heavy PF03028.15 ORF39045 - 2.3e-05 24.5 0.1 0.00014 22.0 0.1 2.3 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain DUF3258 PF11646.8 ORF39045 - 0.083 13.0 12.0 0.11 12.6 0.1 4.7 4 0 0 4 4 4 0 Protein of unknown function DUF3258 DUF4477 PF14780.6 ORF39045 - 0.42 10.2 4.2 0.26 10.9 0.2 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4477) AAA_9 PF12781.7 ORF3926 - 3.1e-76 255.3 2.7 4.8e-76 254.7 1.8 1.8 2 0 0 2 2 2 1 ATP-binding dynein motor region Dynein_C PF18199.1 ORF3926 - 8.4e-53 179.6 0.2 1.9e-52 178.4 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF3926 - 5e-41 140.2 0.0 1.1e-40 139.1 0.0 1.7 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF3926 - 1.3e-26 93.0 0.0 1.1e-25 90.1 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 ORF3926 - 2.3e-09 36.7 0.1 7.2e-09 35.1 0.0 1.9 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor DUF2854 PF11016.8 ORF44234 - 0.051 13.5 1.2 0.19 11.6 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2854) DUF2576 PF10845.8 ORF44234 - 0.52 9.9 2.7 38 4.0 0.2 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2576) SipA_VBS PF17985.1 ORF44234 - 2 8.5 4.0 3 7.9 0.6 3.2 3 0 0 3 3 3 0 SipA vinculin binding site DASH_Dam1 PF08653.10 ORF44234 - 4.5 7.1 14.9 39 4.1 0.6 6.5 2 2 4 6 6 6 0 DASH complex subunit Dam1 BCSC_C PF05420.11 ORF13897 - 8.7e-118 393.3 12.4 1.8e-117 392.3 12.4 1.6 1 0 0 1 1 1 1 Cellulose synthase operon protein C C-terminus (BCSC_C) TPR_19 PF14559.6 ORF13897 - 1.2e-32 112.2 55.7 7.1e-07 29.6 7.9 11.3 8 2 4 12 12 12 8 Tetratricopeptide repeat TPR_2 PF07719.17 ORF13897 - 8.8e-18 62.9 31.6 9.2e-05 22.3 0.2 11.8 12 0 0 12 12 12 5 Tetratricopeptide repeat TPR_16 PF13432.6 ORF13897 - 3.2e-17 62.9 73.6 1.1e-06 29.2 4.4 11.0 11 1 1 12 12 12 5 Tetratricopeptide repeat TPR_14 PF13428.6 ORF13897 - 3.1e-16 58.7 51.6 0.017 15.9 0.4 14.1 10 4 4 14 14 14 6 Tetratricopeptide repeat TPR_8 PF13181.6 ORF13897 - 1.1e-12 47.0 12.5 1.1e-05 25.2 0.1 9.7 11 0 0 11 11 11 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF13897 - 8.4e-11 42.0 37.8 0.0064 16.8 0.3 10.0 9 1 0 10 10 10 4 Tetratricopeptide repeat TPR_7 PF13176.6 ORF13897 - 5e-10 38.7 21.7 0.00019 21.3 0.1 8.7 10 0 0 10 10 9 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF13897 - 9.7e-09 34.7 21.1 0.00011 21.8 0.1 7.9 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_20 PF14561.6 ORF13897 - 5.2e-07 29.9 32.9 0.00025 21.3 0.8 8.1 7 2 2 9 9 9 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF13897 - 0.00029 20.4 28.1 0.011 15.5 0.2 8.4 9 1 1 10 10 10 3 TPR repeat TPR_15 PF13429.6 ORF13897 - 0.0003 20.1 48.7 0.17 11.1 0.8 6.9 2 1 4 7 7 7 3 Tetratricopeptide repeat RPN7 PF10602.9 ORF13897 - 0.00035 20.3 1.5 0.14 11.8 0.0 3.9 4 1 1 5 5 4 1 26S proteasome subunit RPN7 BTAD PF03704.17 ORF13897 - 0.0011 19.5 0.5 0.0011 19.5 0.5 6.9 6 1 2 8 8 8 1 Bacterial transcriptional activator domain TPR_17 PF13431.6 ORF13897 - 0.0055 17.0 22.3 0.031 14.7 0.1 8.0 10 0 0 10 10 7 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF13897 - 0.0083 16.3 36.5 0.081 13.1 0.2 9.5 5 4 3 9 9 9 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF13897 - 0.028 15.0 52.7 1.5 9.6 0.4 12.0 12 1 0 12 12 12 0 Tetratricopeptide repeat TOM20_plant PF06552.12 ORF13897 - 0.066 13.0 0.4 3.2 7.5 0.0 3.0 1 1 2 3 3 3 0 Plant specific mitochondrial import receptor subunit TOM20 TPR_10 PF13374.6 ORF13897 - 0.072 13.0 43.3 0.07 13.0 1.1 9.9 10 0 0 10 10 10 0 Tetratricopeptide repeat ABC_tran PF00005.27 ORF61214 - 2.8e-54 183.4 2.1 1.1e-32 113.4 0.1 3.2 3 0 0 3 3 3 2 ABC transporter ABC_membrane PF00664.23 ORF61214 - 2.5e-37 129.1 25.9 3.8e-31 108.8 9.4 2.2 2 0 0 2 2 2 2 ABC transporter transmembrane region SMC_N PF02463.19 ORF61214 - 1.2e-09 38.0 15.7 6.9e-05 22.4 3.5 4.2 3 2 0 3 3 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF61214 - 9.5e-08 32.1 0.1 0.03 14.4 0.0 3.5 3 0 0 3 3 2 2 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF61214 - 1.3e-05 24.9 0.9 0.2 11.4 0.3 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF61214 - 4.5e-05 23.4 0.1 0.088 12.7 0.1 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 ORF61214 - 0.0001 22.7 0.6 0.96 9.8 0.0 3.0 3 1 0 3 3 3 2 AAA ATPase domain AAA_21 PF13304.6 ORF61214 - 0.00022 21.2 6.8 2 8.2 0.0 5.1 4 2 1 5 5 5 2 AAA domain, putative AbiEii toxin, Type IV TA system IstB_IS21 PF01695.17 ORF61214 - 0.00066 19.5 0.1 1.2 8.8 0.0 3.0 3 0 0 3 3 3 2 IstB-like ATP binding protein AAA_22 PF13401.6 ORF61214 - 0.00074 19.8 0.9 0.42 10.9 0.0 3.1 2 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 ORF61214 - 0.0032 17.8 0.0 6.2 7.3 0.0 3.3 2 0 0 2 2 2 0 RNA helicase AAA_7 PF12775.7 ORF61214 - 0.0038 16.7 0.1 2.2 7.8 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region FKBP_N_2 PF18023.1 ORF61214 - 0.0041 17.2 2.8 0.017 15.2 2.5 2.1 1 1 1 2 2 2 1 BDBT FKBP like N-terminal Roc PF08477.13 ORF61214 - 0.0079 16.4 0.2 3.1 8.0 0.0 3.2 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA_18 PF13238.6 ORF61214 - 0.01 16.4 0.9 3.6 8.1 0.3 3.3 2 1 0 2 2 2 1 AAA domain GTP_EFTU PF00009.27 ORF61214 - 0.012 15.2 0.3 0.51 9.8 0.0 3.1 3 0 0 3 3 3 0 Elongation factor Tu GTP binding domain AAA_25 PF13481.6 ORF61214 - 0.031 13.8 0.0 4.3 6.9 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 ORF61214 - 0.04 13.6 4.3 2.6 7.7 0.0 2.9 3 1 0 3 3 2 0 AAA domain T2SSE PF00437.20 ORF61214 - 0.046 12.8 0.0 1.7 7.7 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein DUF87 PF01935.17 ORF61214 - 0.051 13.7 0.3 0.051 13.7 0.3 4.0 3 2 1 4 4 4 0 Helicase HerA, central domain Dynamin_N PF00350.23 ORF61214 - 0.061 13.4 0.2 0.061 13.4 0.2 4.0 4 0 0 4 4 3 0 Dynamin family ATP_bind_1 PF03029.17 ORF61214 - 0.1 12.3 0.4 11 5.7 0.1 2.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein TsaE PF02367.17 ORF61214 - 0.11 12.5 0.0 6.1 6.9 0.0 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDC45 PF02724.14 ORF61214 - 0.11 10.7 7.8 2.1 6.5 0.1 2.2 2 0 0 2 2 2 0 CDC45-like protein MeaB PF03308.16 ORF61214 - 0.13 11.2 0.0 3.4 6.6 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP-synt_ab PF00006.25 ORF61214 - 0.15 11.7 0.1 9.6 5.8 0.1 2.3 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain FtsK_SpoIIIE PF01580.18 ORF61214 - 0.17 11.2 0.2 9.7 5.5 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF5507 PF17612.2 ORF61214 - 0.18 11.5 2.9 0.11 12.2 0.4 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5507) DUF1644 PF07800.12 ORF61214 - 0.2 11.7 0.0 0.2 11.7 0.0 2.3 3 0 0 3 3 2 0 Protein of unknown function (DUF1644) AIG1 PF04548.16 ORF61214 - 0.58 9.4 0.0 0.58 9.4 0.0 3.1 3 0 0 3 3 3 0 AIG1 family FAM60A PF15396.6 ORF61214 - 7.4 6.5 10.2 1.2 9.1 1.2 2.5 2 0 0 2 2 2 0 Protein Family FAM60A zf-NF-X1 PF01422.17 ORF22391 - 7.9e-10 38.6 197.2 4.7e-05 23.4 11.4 13.0 12 0 0 12 12 12 8 NF-X1 type zinc finger rve PF00665.26 ORF72286 - 6.3e-10 39.3 0.0 1.6e-09 37.9 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain RVT_2 PF07727.14 ORF72286 - 0.00025 20.8 0.0 0.00045 19.9 0.0 1.3 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) zf-NF-X1 PF01422.17 ORF56523 - 7.6e-10 38.7 197.2 4.7e-05 23.4 11.4 13.0 12 0 0 12 12 12 8 NF-X1 type zinc finger E1-E2_ATPase PF00122.20 ORF107996 - 1e-46 158.7 2.4 7.4e-46 156.0 1.0 2.4 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 ORF107996 - 8.9e-37 126.6 0.0 8.9e-37 126.6 0.0 2.7 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF107996 - 3.1e-19 70.1 0.0 9.4e-10 39.1 0.0 2.6 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 ORF107996 - 4.4e-14 51.9 0.0 1.1e-13 50.6 0.0 1.8 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 ORF107996 - 5.1e-12 45.7 0.1 1.2e-11 44.5 0.1 1.7 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 ORF107996 - 2.1e-07 30.9 7.8 1.1e-05 25.3 1.8 2.9 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase Bac_rhamnosid_N PF08531.10 ORF107996 - 0.013 15.3 0.0 0.027 14.3 0.0 1.4 1 0 0 1 1 1 0 Alpha-L-rhamnosidase N-terminal domain THF_DHG_CYH PF00763.23 ORF107996 - 0.068 13.4 0.1 0.19 12.0 0.1 1.7 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain zf-NF-X1 PF01422.17 ORF56215 - 7.4e-10 38.7 197.2 4.7e-05 23.4 11.4 13.0 12 0 0 12 12 12 8 NF-X1 type zinc finger zf-NF-X1 PF01422.17 ORF144103 - 7.4e-10 38.7 197.2 4.7e-05 23.4 11.4 13.0 12 0 0 12 12 12 8 NF-X1 type zinc finger AAA_30 PF13604.6 ORF142420 - 0.00033 20.4 0.6 0.002 17.9 0.6 2.1 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF142420 - 0.0006 19.6 0.0 0.0036 17.1 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF142420 - 0.0027 18.0 1.6 0.36 11.1 0.3 2.8 2 1 1 3 3 3 1 AAA domain AAA PF00004.29 ORF142420 - 0.0067 16.9 0.0 0.024 15.0 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 ORF142420 - 0.0073 16.1 0.1 0.014 15.2 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_19 PF13245.6 ORF142420 - 0.023 15.0 1.6 1.6 9.1 0.3 2.5 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF142420 - 0.025 15.0 2.7 0.24 11.8 0.6 3.3 2 1 0 2 2 2 0 AAA ATPase domain Zeta_toxin PF06414.12 ORF142420 - 0.041 13.2 0.0 0.24 10.7 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin Sigma54_activ_2 PF14532.6 ORF142420 - 0.041 14.0 0.1 0.1 12.7 0.1 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain Bac_DnaA PF00308.18 ORF142420 - 0.093 12.5 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial dnaA protein Glyco_hydro_67N PF03648.14 ORF115103 - 0.11 12.8 2.6 0.55 10.5 2.6 2.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 N-terminus AAA_30 PF13604.6 ORF67860 - 0.00035 20.3 0.6 0.002 17.9 0.6 2.1 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF67860 - 0.00064 19.5 0.0 0.0036 17.1 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF67860 - 0.0022 18.3 1.0 0.36 11.1 0.3 2.6 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 ORF67860 - 0.0063 16.9 0.0 0.024 15.1 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 ORF67860 - 0.0072 16.1 0.1 0.013 15.2 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_19 PF13245.6 ORF67860 - 0.022 15.1 1.6 1.6 9.1 0.3 2.5 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF67860 - 0.024 15.0 2.6 0.24 11.8 0.6 3.3 2 1 0 2 2 2 0 AAA ATPase domain Sigma54_activ_2 PF14532.6 ORF67860 - 0.041 14.0 0.1 0.1 12.7 0.1 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain Bac_DnaA PF00308.18 ORF67860 - 0.093 12.5 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial dnaA protein Zeta_toxin PF06414.12 ORF67860 - 0.11 11.8 0.0 0.24 10.7 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin He_PIG PF05345.12 ORF79714 - 6.7e-22 77.4 65.1 2.7e-09 37.1 10.1 6.7 6 0 0 6 6 6 4 Putative Ig domain TMEM154 PF15102.6 ORF79714 - 1.3e-05 25.1 1.1 1.3e-05 25.1 1.1 3.9 4 1 0 4 4 3 1 TMEM154 protein family SID-1_RNA_chan PF13965.6 ORF79714 - 0.011 14.1 0.4 0.021 13.3 0.4 1.4 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF5122 PF17164.4 ORF79714 - 0.024 14.9 10.9 9.4 6.6 0.2 6.1 6 0 0 6 6 6 0 Domain of unknown function (DUF5122) beta-propeller LapA_dom PF06305.11 ORF79714 - 0.025 14.4 0.4 0.054 13.3 0.4 1.5 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF5305 PF17231.2 ORF79714 - 0.032 13.6 0.4 0.032 13.6 0.4 3.3 3 0 0 3 3 3 0 Family of unknown function (DUF5305) Cadherin_C_2 PF16492.5 ORF79714 - 0.04 14.6 0.1 2.4 9.0 0.0 3.7 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal EphA2_TM PF14575.6 ORF79714 - 0.069 14.0 0.0 0.069 14.0 0.0 2.6 3 1 0 3 3 1 0 Ephrin type-A receptor 2 transmembrane domain Shisa PF13908.6 ORF79714 - 0.5 10.6 0.0 0.5 10.6 0.0 2.9 3 0 0 3 3 3 0 Wnt and FGF inhibitory regulator Tmemb_9 PF05434.11 ORF79714 - 0.96 9.3 2.7 0.61 10.0 0.1 1.9 2 0 0 2 2 2 0 TMEM9 Cadherin_5 PF17892.1 ORF79714 - 1.7 8.6 38.0 0.16 12.0 2.5 5.7 3 1 2 5 5 5 0 Cadherin-like domain Vpu PF00558.19 ORF79714 - 3 7.7 9.9 0.036 13.8 1.1 2.2 2 0 0 2 2 2 0 Vpu protein DUF2140 PF09911.9 ORF70851 - 0.087 12.4 0.7 0.5 9.9 0.0 2.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) GLEYA PF10528.9 ORF70851 - 0.098 13.1 0.2 3.3 8.2 0.0 3.0 2 0 0 2 2 2 0 GLEYA domain NtA PF03146.15 ORF70851 - 0.17 11.8 0.2 0.45 10.4 0.2 1.7 1 0 0 1 1 1 0 Agrin NtA domain DUF2140 PF09911.9 ORF145470 - 0.088 12.4 0.7 0.5 9.9 0.0 2.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) GLEYA PF10528.9 ORF145470 - 0.098 13.1 0.2 3.3 8.2 0.0 3.0 2 0 0 2 2 2 0 GLEYA domain NtA PF03146.15 ORF145470 - 0.17 11.8 0.2 0.45 10.4 0.2 1.7 1 0 0 1 1 1 0 Agrin NtA domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks2.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks2.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks2.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks2.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:08:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4604 PF15377.6 NODE_61398_length_266_cov_182.229437_g53458_i0reverse_frame_1 - 0.058 13.8 7.5 0.066 13.6 7.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) Tetraspanin PF00335.20 NODE_61398_length_266_cov_182.229437_g53458_i0forward_frame_1 - 3.5 7.3 8.8 3.3 7.3 7.0 1.7 2 0 0 2 2 2 0 Tetraspanin family Phage_holin_3_6 PF07332.11 NODE_61398_length_266_cov_182.229437_g53458_i0forward_frame_1 - 3.8 7.6 10.4 7.2 6.7 10.4 1.6 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III KcnmB2_inactiv PF09303.10 NODE_61395_length_266_cov_226.926407_g53455_i0forward_frame_1 - 0.22 11.3 0.5 0.41 10.5 0.5 1.4 1 0 0 1 1 1 0 KCNMB2, ball and chain domain Synthase_beta PF11421.8 NODE_61395_length_266_cov_226.926407_g53455_i0forward_frame_1 - 1.1 10.0 6.9 0.44 11.3 1.8 2.1 1 1 1 2 2 2 0 ATP synthase F1 beta subunit BLF1 PF17752.1 NODE_61393_length_266_cov_275.415584_g53453_i0reverse_frame_1 - 0.061 12.6 0.0 0.061 12.6 0.0 1.1 1 0 0 1 1 1 0 Burkholderia lethal factor 1 Nramp PF01566.18 NODE_61390_length_266_cov_456.000000_g53450_i0forward_frame_1 - 0.0042 16.1 0.0 0.0042 16.1 0.0 1.2 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein Herpes_capsid PF06112.11 NODE_61390_length_266_cov_456.000000_g53450_i0forward_frame_1 - 0.026 14.6 0.5 0.034 14.2 0.5 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF2079 PF09852.9 NODE_61390_length_266_cov_456.000000_g53450_i0forward_frame_1 - 0.14 10.9 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) RimM PF01782.18 NODE_61386_length_266_cov_644.406926_g53446_i0reverse_frame_1 - 0.077 13.2 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 RimM N-terminal domain Carb_anhydrase PF00194.21 NODE_61381_length_266_cov_1646.593074_g53441_i0forward_frame_1 - 4.8e-09 36.1 0.6 5.3e-09 36.0 0.6 1.0 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase HSP70 PF00012.20 NODE_61378_length_266_cov_7097.112554_g53438_i0reverse_frame_1 - 1.9e-22 79.2 2.4 2e-22 79.1 2.4 1.0 1 0 0 1 1 1 1 Hsp70 protein DIOX_N PF14226.6 NODE_61378_length_266_cov_7097.112554_g53438_i0reverse_frame_1 - 0.059 14.1 0.3 0.066 14.0 0.3 1.1 1 0 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal SHS2_FTSA PF02491.20 NODE_61378_length_266_cov_7097.112554_g53438_i0reverse_frame_1 - 0.13 12.7 0.3 0.18 12.2 0.3 1.3 1 0 0 1 1 1 0 SHS2 domain inserted in FTSA HSP70 PF00012.20 NODE_61377_length_266_cov_10132.147186_g53437_i0reverse_frame_1 - 1.9e-22 79.2 2.4 2e-22 79.1 2.4 1.0 1 0 0 1 1 1 1 Hsp70 protein DIOX_N PF14226.6 NODE_61377_length_266_cov_10132.147186_g53437_i0reverse_frame_1 - 0.059 14.1 0.3 0.066 14.0 0.3 1.1 1 0 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal SHS2_FTSA PF02491.20 NODE_61377_length_266_cov_10132.147186_g53437_i0reverse_frame_1 - 0.13 12.7 0.3 0.18 12.2 0.3 1.3 1 0 0 1 1 1 0 SHS2 domain inserted in FTSA DHODB_Fe-S_bind PF10418.9 NODE_61372_length_267_cov_0.892241_g53432_i0reverse_frame_1 - 0.016 15.0 2.6 0.033 14.0 2.6 1.7 1 1 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Tenui_NCP PF04876.12 NODE_61368_length_267_cov_1.034483_g53428_i0reverse_frame_1 - 0.056 13.0 0.1 0.06 12.9 0.1 1.0 1 0 0 1 1 1 0 Tenuivirus major non-capsid protein MSL2-CXC PF16682.5 NODE_61368_length_267_cov_1.034483_g53428_i0forward_frame_1 - 1.1 9.5 11.5 0.11 12.6 6.8 1.7 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Fer4_24 PF18109.1 NODE_61366_length_267_cov_1.077586_g53426_i0reverse_frame_1 - 0.047 14.0 2.5 0.086 13.1 2.5 1.4 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain PPR_2 PF13041.6 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 2.8e-16 59.4 0.0 3e-09 36.9 0.0 2.7 1 1 2 3 3 3 3 PPR repeat family PPR PF01535.20 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 7.2e-14 51.0 0.0 2.5e-05 24.2 0.0 3.0 3 0 0 3 3 3 2 PPR repeat PPR_3 PF13812.6 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 3.9e-09 36.5 0.0 0.0006 19.8 0.0 2.0 1 1 0 2 2 2 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 3.2e-08 33.1 0.0 0.00022 20.8 0.0 3.3 4 0 0 4 4 4 2 PPR repeat TPR_14 PF13428.6 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 0.0089 16.8 0.6 1.3 10.1 0.1 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat UPF0227 PF05728.12 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 0.0095 15.9 0.0 0.01 15.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) PPR_long PF17177.4 NODE_61362_length_267_cov_1.237069_g53422_i0forward_frame_1 - 0.04 13.3 0.0 0.11 11.8 0.0 1.5 1 1 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP FAD_binding_1 PF00667.20 NODE_61356_length_267_cov_1.383621_g53416_i0forward_frame_1 - 1.2e-14 54.5 0.0 1.3e-14 54.3 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain DUF5549 PF17703.1 NODE_61354_length_267_cov_1.452586_g53414_i0reverse_frame_1 - 0.072 12.7 1.3 0.078 12.6 1.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) RVT_3 PF13456.6 NODE_61353_length_267_cov_1.491379_g53413_i0reverse_frame_1 - 0.088 12.6 0.1 0.1 12.4 0.1 1.1 1 0 0 1 1 1 0 Reverse transcriptase-like Corona_NS2 PF04753.12 NODE_61353_length_267_cov_1.491379_g53413_i0reverse_frame_1 - 0.093 13.3 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 SNAD4 PF18750.1 NODE_61349_length_267_cov_1.564655_g53409_i0forward_frame_1 - 0.092 12.9 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 NAD1 PF18778.1 NODE_61349_length_267_cov_1.564655_g53409_i0forward_frame_1 - 0.14 12.2 0.5 0.3 11.1 0.2 1.6 1 1 1 2 2 2 0 Novel AID APOBEC clade 1 MORN PF02493.20 NODE_61342_length_267_cov_1.724138_g53402_i0forward_frame_1 - 0.075 13.0 3.2 2 8.5 0.4 2.9 3 0 0 3 3 3 0 MORN repeat DUF2815 PF10991.8 NODE_61340_length_267_cov_1.771552_g53400_i0reverse_frame_1 - 0.14 12.1 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2815) TraS PF10624.9 NODE_61340_length_267_cov_1.771552_g53400_i0forward_frame_1 - 0.0073 16.3 2.5 0.0081 16.1 2.5 1.2 1 0 0 1 1 1 1 Plasmid conjugative transfer entry exclusion protein TraS Glyco_transf_20 PF00982.21 NODE_61339_length_267_cov_1.793103_g53399_i0reverse_frame_1 - 1.7e-34 119.3 1.9 1.8e-34 119.2 1.9 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 DUF2947 PF11163.8 NODE_61339_length_267_cov_1.793103_g53399_i0forward_frame_1 - 0.11 12.3 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2947) zf-RING_6 PF14835.6 NODE_61337_length_267_cov_1.818966_g53397_i0reverse_frame_1 - 0.0029 17.4 2.0 0.0029 17.4 2.0 1.8 1 1 1 2 2 2 1 zf-RING of BARD1-type protein PKD_channel PF08016.12 NODE_61334_length_267_cov_1.931034_g53394_i0forward_frame_1 - 0.012 14.3 2.4 0.014 14.1 2.4 1.0 1 0 0 1 1 1 0 Polycystin cation channel YtxC PF08812.11 NODE_61333_length_267_cov_1.935345_g53393_i0forward_frame_1 - 0.049 13.2 0.0 0.058 13.0 0.0 1.0 1 0 0 1 1 1 0 YtxC-like family TB PF00683.17 NODE_61332_length_267_cov_1.935345_g53392_i0reverse_frame_1 - 0.017 14.9 2.5 0.026 14.3 2.5 1.3 1 0 0 1 1 1 0 TB domain APS_kinase PF01583.20 NODE_61325_length_267_cov_1.969828_g53385_i0reverse_frame_1 - 1e-15 58.0 0.0 1.1e-15 57.9 0.0 1.1 1 0 0 1 1 1 1 Adenylylsulphate kinase Radial_spoke_3 PF06098.11 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 0.19 11.0 11.2 0.24 10.6 11.2 1.0 1 0 0 1 1 1 0 Radial spoke protein 3 Dis3l2_C_term PF17877.1 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 0.29 11.5 4.0 0.41 11.0 4.0 1.2 1 0 0 1 1 1 0 DIS3-like exonuclease 2 C terminal EMC3_TMCO1 PF01956.16 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 1.1 9.0 7.3 1.2 8.9 7.3 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like YebO PF13974.6 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 1.1 9.4 7.0 1.4 9.1 7.0 1.2 1 0 0 1 1 1 0 YebO-like protein Ureide_permease PF07168.11 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 1.3 7.7 3.0 1.2 7.8 3.0 1.1 1 0 0 1 1 1 0 Ureide permease 60KD_IMP PF02096.20 NODE_61323_length_267_cov_2.012931_g53383_i0reverse_frame_1 - 5.1 7.0 7.6 6 6.7 7.6 1.1 1 0 0 1 1 1 0 60Kd inner membrane protein TetR_C_8 PF14278.6 NODE_61322_length_267_cov_2.017241_g53382_i0reverse_frame_1 - 0.051 13.7 0.4 0.062 13.4 0.4 1.1 1 0 0 1 1 1 0 Transcriptional regulator C-terminal region ZinT PF09223.11 NODE_61320_length_267_cov_2.030172_g53380_i0reverse_frame_1 - 5.4e-43 147.0 0.5 5.9e-43 146.9 0.5 1.0 1 0 0 1 1 1 1 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment Saw1 PF11561.8 NODE_61320_length_267_cov_2.030172_g53380_i0reverse_frame_1 - 0.026 14.1 0.0 0.03 13.9 0.0 1.0 1 0 0 1 1 1 0 Single strand annealing-weakened 1 COX14 PF14880.6 NODE_61311_length_267_cov_2.176724_g53371_i0reverse_frame_1 - 0.027 14.3 0.7 0.045 13.6 0.7 1.3 1 0 0 1 1 1 0 Cytochrome oxidase c assembly RNase_H PF00075.24 NODE_61306_length_267_cov_2.327586_g53366_i0reverse_frame_1 - 9.6e-15 55.0 0.7 1.2e-14 54.7 0.7 1.1 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.6 NODE_61306_length_267_cov_2.327586_g53366_i0reverse_frame_1 - 6e-08 32.5 0.7 7e-08 32.3 0.7 1.1 1 0 0 1 1 1 1 Reverse transcriptase-like FlpD PF02662.16 NODE_61306_length_267_cov_2.327586_g53366_i0reverse_frame_1 - 0.045 13.8 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit LptF_LptG PF03739.14 NODE_61305_length_267_cov_2.383621_g53365_i0forward_frame_1 - 0.087 11.7 1.1 0.12 11.2 1.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG UL42 PF17638.2 NODE_61304_length_267_cov_2.405172_g53364_i0forward_frame_1 - 0.23 11.4 2.3 2.8 7.9 0.2 2.0 1 1 1 2 2 2 0 HCMV UL42 DUF3984 PF13136.6 NODE_61302_length_267_cov_2.461207_g53362_i0forward_frame_1 - 0.1 12.0 0.6 0.14 11.5 0.4 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3984) FYVE PF01363.21 NODE_61292_length_267_cov_2.818966_g53352_i0reverse_frame_1 - 0.011 15.9 0.1 0.011 15.9 0.1 1.2 1 0 0 1 1 1 0 FYVE zinc finger PDR_CDR PF06422.12 NODE_61285_length_267_cov_3.573276_g53345_i0forward_frame_1 - 1.6 8.7 4.4 3.4 7.6 4.4 1.6 1 1 0 1 1 1 0 CDR ABC transporter Peptidase_S49_N PF08496.10 NODE_61276_length_267_cov_5.512931_g53336_i0reverse_frame_1 - 0.012 15.7 2.6 0.015 15.4 2.6 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal MutH PF02976.15 NODE_61271_length_267_cov_19.870690_g53331_i0reverse_frame_1 - 0.01 15.8 0.4 0.012 15.6 0.4 1.1 1 0 0 1 1 1 0 DNA mismatch repair enzyme MutH PMC2NT PF08066.12 NODE_61271_length_267_cov_19.870690_g53331_i0reverse_frame_1 - 0.022 15.4 0.0 0.11 13.2 0.0 1.9 1 1 1 2 2 2 0 PMC2NT (NUC016) domain Toxin_YhaV PF11663.8 NODE_61271_length_267_cov_19.870690_g53331_i0reverse_frame_1 - 0.063 13.3 0.4 0.076 13.1 0.4 1.1 1 0 0 1 1 1 0 Toxin with endonuclease activity, of toxin-antitoxin system PABP PF00658.18 NODE_61267_length_267_cov_51.814655_g53327_i0reverse_frame_1 - 1.2e-09 38.2 0.1 1.4e-09 37.9 0.1 1.1 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain RRM_1 PF00076.22 NODE_61266_length_267_cov_54.590517_g53326_i0forward_frame_1 - 0.0024 17.7 0.4 0.004 16.9 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glycoprot_B_PH1 PF17416.2 NODE_61266_length_267_cov_54.590517_g53326_i0forward_frame_1 - 0.0085 15.7 0.0 0.0085 15.7 0.0 1.1 1 0 0 1 1 1 1 Herpesvirus Glycoprotein B SNF2_N PF00176.23 NODE_61266_length_267_cov_54.590517_g53326_i0forward_frame_1 - 0.29 9.8 3.5 0.3 9.7 3.5 1.1 1 0 0 1 1 1 0 SNF2 family N-terminal domain DUF3880 PF12996.7 NODE_61262_length_267_cov_61.905172_g53322_i0forward_frame_1 - 0.035 14.2 0.2 0.05 13.7 0.2 1.3 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) DUF1385 PF07136.11 NODE_61262_length_267_cov_61.905172_g53322_i0forward_frame_1 - 0.041 13.2 1.1 0.048 12.9 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) CD52 PF15116.6 NODE_61262_length_267_cov_61.905172_g53322_i0forward_frame_1 - 0.31 11.1 1.0 0.61 10.2 1.0 1.4 1 0 0 1 1 1 0 CAMPATH-1 antigen DUF4579 PF15158.6 NODE_61257_length_267_cov_66.202586_g53317_i0forward_frame_1 - 0.0066 16.2 0.2 0.0076 16.0 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4579) Proton_antipo_C PF01010.19 NODE_61257_length_267_cov_66.202586_g53317_i0forward_frame_1 - 0.084 12.5 2.7 0.098 12.3 2.7 1.1 1 0 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DUF5605 PF18310.1 NODE_61241_length_267_cov_105.762931_g53301_i0forward_frame_1 - 0.028 14.3 0.1 0.049 13.5 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5605) MCPVI PF02993.14 NODE_61241_length_267_cov_105.762931_g53301_i0forward_frame_1 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Minor capsid protein VI RecG_N PF17190.4 NODE_61232_length_267_cov_152.418103_g53292_i0reverse_frame_1 - 0.048 14.4 0.8 0.067 13.9 0.8 1.2 1 0 0 1 1 1 0 RecG N-terminal helical domain Herpes_PAP PF03325.13 NODE_61231_length_267_cov_161.461207_g53291_i0forward_frame_1 - 0.089 12.4 0.1 0.11 12.0 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus polymerase accessory protein Trehalose_PPase PF02358.16 NODE_61226_length_267_cov_274.706897_g53286_i0reverse_frame_1 - 0.087 11.9 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase zf-Dof PF02701.15 NODE_61226_length_267_cov_274.706897_g53286_i0forward_frame_1 - 0.079 13.1 2.1 0.11 12.7 0.1 1.9 2 0 0 2 2 2 0 Dof domain, zinc finger DUF2733 PF10813.8 NODE_61225_length_267_cov_280.474138_g53285_i0forward_frame_1 - 0.76 9.6 3.6 8.1 6.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) Glyco_hydro_38N PF01074.22 NODE_61219_length_267_cov_835.146552_g53279_i0forward_frame_1 - 1.4e-09 37.8 0.5 1.4e-09 37.8 0.5 1.8 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain COX7a PF02238.15 NODE_61219_length_267_cov_835.146552_g53279_i0forward_frame_1 - 0.0061 16.9 0.2 0.018 15.4 0.1 1.8 2 0 0 2 2 2 1 Cytochrome c oxidase subunit VII TPR_10 PF13374.6 NODE_61214_length_268_cov_0.987124_g53274_i0reverse_frame_2 - 0.18 11.7 0.2 0.32 10.9 0.2 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat MANEC PF07502.14 NODE_61213_length_268_cov_1.000000_g53273_i0forward_frame_3 - 0.0033 17.7 1.7 0.0037 17.5 1.7 1.2 1 0 0 1 1 1 1 MANEC domain PAN_4 PF14295.6 NODE_61213_length_268_cov_1.000000_g53273_i0forward_frame_3 - 0.063 13.2 6.8 0.12 12.3 6.8 1.6 1 1 0 1 1 1 0 PAN domain Peptidase_C39_2 PF13529.6 NODE_61209_length_268_cov_1.145923_g53269_i0forward_frame_2 - 0.069 13.7 0.8 0.084 13.4 0.8 1.1 1 0 0 1 1 1 0 Peptidase_C39 like family DUF1106 PF06523.11 NODE_61201_length_268_cov_1.253219_g53261_i0reverse_frame_2 - 0.16 12.0 2.7 0.18 11.9 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1106) AUDH_Cupin PF18637.1 NODE_61199_length_268_cov_1.296137_g53259_i0forward_frame_3 - 0.16 12.0 0.8 0.16 12.0 0.3 1.3 1 1 0 1 1 1 0 Aldos-2-ulose dehydratase/isomerase (AUDH) Cupin domain BASP1 PF05466.12 NODE_61195_length_268_cov_1.467811_g53255_i0forward_frame_2 - 1.9 8.4 8.4 2.2 8.3 8.4 1.1 1 0 0 1 1 1 0 Brain acid soluble protein 1 (BASP1 protein) Tfb2 PF03849.14 NODE_61194_length_268_cov_1.480687_g53254_i0reverse_frame_3 - 0.12 11.3 0.0 0.13 11.2 0.0 1.0 1 0 0 1 1 1 0 Transcription factor Tfb2 Aldo_ket_red PF00248.21 NODE_61194_length_268_cov_1.480687_g53254_i0reverse_frame_2 - 6.6e-08 32.1 0.0 1.3e-07 31.1 0.0 1.5 1 1 0 1 1 1 1 Aldo/keto reductase family DUF240 PF03086.14 NODE_61191_length_268_cov_1.497854_g53251_i0reverse_frame_2 - 0.031 14.2 2.5 0.034 14.1 2.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF240) LEA_6 PF10714.9 NODE_61190_length_268_cov_1.510730_g53250_i0reverse_frame_3 - 0.22 11.6 8.1 6.6 6.9 1.1 2.8 1 1 2 3 3 3 0 Late embryogenesis abundant protein 18 DUF5090 PF17009.5 NODE_61190_length_268_cov_1.510730_g53250_i0forward_frame_3 - 7.2 6.5 11.6 3.2 7.7 8.8 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5090) NusB PF01029.18 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.028 14.6 2.2 0.028 14.6 2.2 1.3 1 1 0 1 1 1 0 NusB family OPA3 PF07047.12 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.034 13.9 0.2 0.043 13.6 0.2 1.1 1 0 0 1 1 1 0 Optic atrophy 3 protein (OPA3) MIT_C PF16565.5 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.076 13.0 1.3 0.11 12.5 0.9 1.4 1 1 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT Selenoprotein_S PF06936.11 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.082 12.7 3.4 0.099 12.4 3.4 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) TMPIT PF07851.13 NODE_61188_length_268_cov_1.515021_g53248_i0forward_frame_3 - 0.7 9.1 6.8 0.79 8.9 6.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein GET2 PF08690.10 NODE_61181_length_268_cov_1.622318_g53241_i0reverse_frame_3 - 0.13 11.9 0.1 0.13 11.9 0.1 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 PAP2 PF01569.21 NODE_61177_length_268_cov_1.708155_g53237_i0forward_frame_3 - 0.029 14.1 0.4 0.078 12.8 0.0 1.7 1 1 1 2 2 2 0 PAP2 superfamily Inhibitor_I68 PF10468.9 NODE_61175_length_268_cov_1.789700_g53235_i0forward_frame_3 - 0.007 16.7 0.1 0.0093 16.3 0.1 1.1 1 0 0 1 1 1 1 Carboxypeptidase inhibitor I68 Spindle_Spc25 PF08234.12 NODE_61174_length_268_cov_1.798283_g53234_i0reverse_frame_2 - 0.034 14.3 0.7 0.048 13.9 0.7 1.3 1 0 0 1 1 1 0 Chromosome segregation protein Spc25 DUF1664 PF07889.12 NODE_61173_length_268_cov_1.811159_g53233_i0reverse_frame_3 - 0.17 11.9 1.4 0.2 11.7 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Arteri_Gl PF00951.18 NODE_61173_length_268_cov_1.811159_g53233_i0forward_frame_3 - 0.16 11.8 5.9 0.18 11.6 5.9 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein YHYH PF14240.6 NODE_61168_length_268_cov_1.914163_g53228_i0reverse_frame_2 - 0.0099 15.8 1.4 0.015 15.3 1.4 1.2 1 0 0 1 1 1 1 YHYH protein NIF3 PF01784.18 NODE_61167_length_268_cov_1.922747_g53227_i0reverse_frame_3 - 0.005 16.5 0.1 0.0053 16.4 0.1 1.1 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) DNA_pol_viral_C PF00336.18 NODE_61167_length_268_cov_1.922747_g53227_i0reverse_frame_3 - 0.11 11.9 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase (viral) C-terminal domain TPR_4 PF07721.14 NODE_61164_length_268_cov_1.957082_g53224_i0reverse_frame_2 - 0.15 12.8 3.4 5.6 7.9 0.2 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat zf-CCCH_7 PF18586.1 NODE_61159_length_268_cov_2.047210_g53219_i0forward_frame_3 - 0.077 13.3 0.3 0.13 12.6 0.1 1.5 2 0 0 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 DUF4215 PF13948.6 NODE_61156_length_268_cov_2.115880_g53216_i0reverse_frame_2 - 0.15 12.5 3.1 0.65 10.5 2.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4215) DUF4605 PF15378.6 NODE_61156_length_268_cov_2.115880_g53216_i0forward_frame_2 - 0.0031 17.3 0.0 0.0055 16.5 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4605) DUF5569 PF17729.1 NODE_61153_length_268_cov_2.141631_g53213_i0reverse_frame_2 - 0.04 13.8 0.1 0.046 13.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5569) Siva PF05458.12 NODE_61153_length_268_cov_2.141631_g53213_i0forward_frame_3 - 0.19 11.4 5.5 0.23 11.1 5.5 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) DUF4164 PF13747.6 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_2 - 0.033 14.5 1.2 0.045 14.0 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Glyco_hydro_76 PF03663.14 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_2 - 0.078 12.5 0.0 0.089 12.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 76 DUF5551 PF17705.1 NODE_61151_length_268_cov_2.175966_g53211_i0reverse_frame_2 - 0.084 12.5 0.2 0.094 12.3 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5551) LRR_1 PF00560.33 NODE_61149_length_268_cov_2.184549_g53209_i0forward_frame_2 - 0.06 13.9 0.6 0.42 11.3 0.2 2.3 2 0 0 2 2 2 0 Leucine Rich Repeat CPSase_L_D3 PF02787.19 NODE_61148_length_268_cov_2.214592_g53208_i0forward_frame_3 - 0.033 14.5 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MFS_1 PF07690.16 NODE_61146_length_268_cov_2.248927_g53206_i0forward_frame_2 - 6.1e-10 38.6 2.1 7.1e-10 38.3 2.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Cg6151-P PF10233.9 NODE_61146_length_268_cov_2.248927_g53206_i0forward_frame_2 - 0.065 13.5 3.7 0.081 13.2 3.7 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein CG6151-P Bindin PF02084.15 NODE_61140_length_268_cov_2.347639_g53200_i0reverse_frame_2 - 0.11 12.7 0.1 0.11 12.7 0.1 1.0 1 0 0 1 1 1 0 Bindin Na_trans_cytopl PF11933.8 NODE_61139_length_268_cov_2.420601_g53199_i0reverse_frame_3 - 0.022 14.6 0.6 0.028 14.2 0.6 1.3 1 1 0 1 1 1 0 Cytoplasmic domain of voltage-gated Na+ ion channel IBV_3A PF03617.13 NODE_61138_length_268_cov_2.429185_g53198_i0forward_frame_3 - 2.3 8.3 10.6 1.3 9.0 3.6 2.2 1 1 1 2 2 2 0 IBV 3A protein NTP_transf_3 PF12804.7 NODE_61137_length_268_cov_2.454936_g53197_i0reverse_frame_3 - 2.3e-06 28.0 0.0 2.5e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain C1_1 PF00130.22 NODE_61137_length_268_cov_2.454936_g53197_i0forward_frame_2 - 0.11 12.4 0.9 0.11 12.4 0.9 2.3 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Lyase_1 PF00206.20 NODE_61134_length_268_cov_2.493562_g53194_i0forward_frame_3 - 0.0043 16.5 0.0 0.0056 16.1 0.0 1.1 1 0 0 1 1 1 1 Lyase Ku_N PF03731.15 NODE_61133_length_268_cov_2.497854_g53193_i0reverse_frame_3 - 0.011 15.5 0.1 0.014 15.2 0.1 1.2 1 0 0 1 1 1 0 Ku70/Ku80 N-terminal alpha/beta domain NOG1 PF06858.14 NODE_61133_length_268_cov_2.497854_g53193_i0reverse_frame_3 - 0.045 13.5 0.0 0.095 12.5 0.0 1.6 1 0 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) Aldedh PF00171.22 NODE_61127_length_268_cov_2.759657_g53187_i0forward_frame_3 - 1.9e-26 92.6 0.0 2e-26 92.5 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family BSD PF03909.17 NODE_61126_length_268_cov_2.819742_g53186_i0reverse_frame_2 - 0.097 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 BSD domain Hit1_C PF18268.1 NODE_61124_length_268_cov_3.042918_g53184_i0forward_frame_3 - 0.02 15.0 0.1 0.23 11.6 0.0 2.3 1 1 1 2 2 2 0 Hit1 C-terminal CDC37_N PF03234.14 NODE_61124_length_268_cov_3.042918_g53184_i0forward_frame_3 - 0.061 14.2 0.8 0.072 14.0 0.8 1.1 1 0 0 1 1 1 0 Cdc37 N terminal kinase binding RNA_pol_Rpb1_5 PF04998.17 NODE_61120_length_268_cov_3.197425_g53180_i0reverse_frame_3 - 0.15 11.4 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 LysR_substrate PF03466.20 NODE_61120_length_268_cov_3.197425_g53180_i0forward_frame_3 - 2.5e-12 46.6 0.0 2.9e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Ank_3 PF13606.6 NODE_61120_length_268_cov_3.197425_g53180_i0forward_frame_3 - 0.08 13.5 0.1 0.23 12.1 0.0 1.8 2 0 0 2 2 2 0 Ankyrin repeat Aminotran_3 PF00202.21 NODE_61119_length_268_cov_3.330472_g53179_i0reverse_frame_2 - 8.8e-40 136.6 0.4 9.4e-40 136.5 0.4 1.0 1 0 0 1 1 1 1 Aminotransferase class-III DUF5484 PF17583.2 NODE_61114_length_268_cov_16.635193_g53174_i0reverse_frame_3 - 0.16 11.7 0.8 0.26 11.0 0.8 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5484) DUF1287 PF06940.11 NODE_61114_length_268_cov_16.635193_g53174_i0reverse_frame_2 - 0.094 12.4 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1287) Med21 PF11221.8 NODE_61113_length_268_cov_31.669528_g53173_i0reverse_frame_3 - 0.36 11.1 4.8 0.52 10.6 4.8 1.2 1 0 0 1 1 1 0 Subunit 21 of Mediator complex DUF2417 PF10329.9 NODE_61113_length_268_cov_31.669528_g53173_i0forward_frame_3 - 2.9 7.2 7.9 2.8 7.3 7.9 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Tmemb_18A PF09771.9 NODE_61105_length_268_cov_45.107296_g53165_i0forward_frame_2 - 0.042 14.2 0.4 0.049 14.0 0.4 1.3 1 0 0 1 1 1 0 Transmembrane protein 188 DUF2744 PF10910.8 NODE_61104_length_268_cov_47.107296_g53164_i0forward_frame_3 - 0.038 14.0 0.7 0.047 13.7 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2744) DUF1195 PF06708.11 NODE_61104_length_268_cov_47.107296_g53164_i0forward_frame_3 - 0.059 13.1 1.2 0.067 13.0 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1195) SSP160 PF06933.11 NODE_61103_length_268_cov_58.845494_g53163_i0reverse_frame_2 - 0.35 9.0 2.6 0.38 8.9 2.6 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Rad60-SLD_2 PF13881.6 NODE_61101_length_268_cov_60.450644_g53161_i0reverse_frame_2 - 0.075 13.1 0.1 0.099 12.8 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Swi3 PF07962.12 NODE_61098_length_268_cov_70.643777_g53158_i0reverse_frame_2 - 0.37 10.8 2.9 0.84 9.7 3.0 1.6 1 1 0 1 1 1 0 Replication Fork Protection Component Swi3 Acyl_transf_3 PF01757.22 NODE_61096_length_268_cov_72.755365_g53156_i0forward_frame_3 - 0.078 12.0 6.0 0.093 11.8 6.0 1.1 1 0 0 1 1 1 0 Acyltransferase family IL2RB_N1 PF18707.1 NODE_61095_length_268_cov_73.004292_g53155_i0reverse_frame_2 - 0.018 15.6 0.9 0.021 15.3 0.9 1.2 1 0 0 1 1 1 0 Interleukin-2 receptor subunit beta N-terminal domain 1 IL12p40_C PF10420.9 NODE_61095_length_268_cov_73.004292_g53155_i0reverse_frame_2 - 0.14 12.6 1.6 0.2 12.2 1.6 1.2 1 0 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus Gram_pos_anchor PF00746.21 NODE_61094_length_268_cov_73.678112_g53154_i0forward_frame_2 - 1.3 9.0 4.9 9.3 6.3 0.0 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif AsiA PF09010.10 NODE_61093_length_268_cov_76.103004_g53153_i0reverse_frame_3 - 0.0033 17.5 0.0 0.0041 17.2 0.0 1.1 1 0 0 1 1 1 1 Anti-Sigma Factor A SprB PF13573.6 NODE_61091_length_268_cov_81.133047_g53151_i0reverse_frame_2 - 0.06 13.1 0.5 0.06 13.1 0.5 1.7 2 0 0 2 2 2 0 SprB repeat DDOST_48kD PF03345.14 NODE_61090_length_268_cov_83.017167_g53150_i0forward_frame_2 - 1.7e-05 23.9 0.0 1.8e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 Oligosaccharyltransferase 48 kDa subunit beta TGT PF01702.18 NODE_61090_length_268_cov_83.017167_g53150_i0forward_frame_2 - 0.13 11.4 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase Pyr_excise PF03013.14 NODE_61088_length_268_cov_89.630901_g53148_i0reverse_frame_2 - 0.063 13.3 0.0 0.075 13.0 0.0 1.1 1 0 0 1 1 1 0 Pyrimidine dimer DNA glycosylase Helicase_C_2 PF13307.6 NODE_61086_length_268_cov_94.343348_g53146_i0reverse_frame_2 - 0.011 15.9 0.0 0.018 15.2 0.0 1.4 1 1 0 1 1 1 0 Helicase C-terminal domain DUF5365 PF17326.2 NODE_61085_length_268_cov_100.944206_g53145_i0reverse_frame_3 - 0.012 16.0 0.1 0.013 15.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5365) SMG1 PF15785.5 NODE_61084_length_268_cov_114.004292_g53144_i0forward_frame_3 - 0.12 10.8 0.0 0.12 10.7 0.0 1.0 1 0 0 1 1 1 0 Serine/threonine-protein kinase smg-1 TMEM126 PF07114.11 NODE_61082_length_268_cov_123.454936_g53142_i0forward_frame_3 - 0.055 12.9 0.2 0.062 12.7 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 126 DUF5131 PF07505.11 NODE_61080_length_268_cov_142.334764_g53140_i0reverse_frame_3 - 0.64 9.4 5.2 2.3 7.6 5.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF5131) Defensin_beta PF00711.19 NODE_61076_length_268_cov_251.051502_g53136_i0forward_frame_3 - 3.9 7.6 7.8 3 7.9 0.9 2.2 2 0 0 2 2 2 0 Beta defensin UPF0524 PF15823.5 NODE_61074_length_268_cov_284.197425_g53134_i0reverse_frame_2 - 0.026 13.9 0.0 0.03 13.7 0.0 1.0 1 0 0 1 1 1 0 UPF0524 of C3orf70 RWP-RK PF02042.15 NODE_61074_length_268_cov_284.197425_g53134_i0reverse_frame_2 - 0.057 13.4 1.8 2.6 8.1 0.0 2.1 2 0 0 2 2 2 0 RWP-RK domain Pkinase_C PF00433.24 NODE_61070_length_268_cov_587.244635_g53130_i0reverse_frame_3 - 2.9e-05 24.7 0.5 3.8e-05 24.3 0.5 1.3 1 0 0 1 1 1 1 Protein kinase C terminal domain BLACT_WH PF17778.1 NODE_61067_length_269_cov_1.012821_g53127_i0reverse_frame_2 - 0.082 12.9 0.2 0.15 12.1 0.2 1.4 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain MRP-S28 PF10213.9 NODE_61063_length_269_cov_1.051282_g53123_i0forward_frame_3 - 0.018 15.4 0.1 0.021 15.2 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit protein DUF1560 PF07597.11 NODE_61063_length_269_cov_1.051282_g53123_i0forward_frame_3 - 0.05 13.6 0.3 0.1 12.6 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1560) zf-HC3 PF16827.5 NODE_61062_length_269_cov_1.055556_g53122_i0forward_frame_3 - 0.029 14.6 1.0 0.043 14.0 1.0 1.5 1 1 0 1 1 1 0 zinc-finger Corona_S2 PF01601.16 NODE_61057_length_269_cov_1.183761_g53117_i0forward_frame_3 - 5.1 5.5 13.1 5.7 5.3 13.1 1.1 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein MA-Mit PF09245.10 NODE_61053_length_269_cov_1.200855_g53113_i0reverse_frame_2 - 0.073 12.5 0.2 0.085 12.3 0.2 1.0 1 0 0 1 1 1 0 Mycoplasma arthritidis-derived mitogen PHM7_cyt PF14703.6 NODE_61051_length_269_cov_1.269231_g53111_i0forward_frame_3 - 0.00017 21.9 0.0 0.00019 21.7 0.0 1.1 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter PAM2 PF07145.15 NODE_61049_length_269_cov_1.324786_g53109_i0reverse_frame_2 - 5.8 6.8 10.8 6.7 6.6 0.1 4.4 4 1 0 4 4 4 0 Ataxin-2 C-terminal region DUF1556 PF07590.11 NODE_61049_length_269_cov_1.324786_g53109_i0reverse_frame_2 - 9.2 6.7 8.0 6.4 7.2 3.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1556) Pkinase PF00069.25 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 3.9e-27 95.3 0.0 4.5e-27 95.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 1.7e-10 40.6 0.0 1.9e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 0.00011 21.6 0.0 0.00011 21.6 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Choline_kinase PF01633.20 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 0.0094 15.6 0.1 0.011 15.4 0.1 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase Kdo PF06293.14 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 0.042 13.2 0.0 0.042 13.2 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family PIP49_C PF12260.8 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 0.058 13.0 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 APH PF01636.23 NODE_61044_length_269_cov_1.367521_g53104_i0forward_frame_2 - 0.16 11.9 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Virul_fac_BrkB PF03631.15 NODE_61042_length_269_cov_1.431624_g53102_i0reverse_frame_3 - 0.0023 17.6 1.8 0.0023 17.6 1.8 1.1 1 0 0 1 1 1 1 Virulence factor BrkB DUF3112 PF11309.8 NODE_61042_length_269_cov_1.431624_g53102_i0reverse_frame_3 - 0.016 14.6 3.2 0.02 14.3 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) DUF3290 PF11694.8 NODE_61042_length_269_cov_1.431624_g53102_i0reverse_frame_3 - 1.8 8.5 5.0 0.48 10.4 0.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3290) DUF2443 PF10398.9 NODE_61042_length_269_cov_1.431624_g53102_i0reverse_frame_2 - 0.011 15.8 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) zf-CCCH_7 PF18586.1 NODE_61041_length_269_cov_1.435897_g53101_i0forward_frame_2 - 0.36 11.2 3.3 0.57 10.5 3.3 1.3 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 FTSW_RODA_SPOVE PF01098.19 NODE_61040_length_269_cov_1.482906_g53100_i0reverse_frame_2 - 0.15 11.0 0.0 0.18 10.8 0.0 1.0 1 0 0 1 1 1 0 Cell cycle protein Nepo_coat PF03391.15 NODE_61039_length_269_cov_1.491453_g53099_i0forward_frame_2 - 0.046 13.2 0.1 0.058 12.9 0.1 1.1 1 0 0 1 1 1 0 Nepovirus coat protein, central domain DUF629 PF04780.12 NODE_61039_length_269_cov_1.491453_g53099_i0forward_frame_2 - 0.13 10.7 2.0 0.14 10.6 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF629) TMC PF07810.13 NODE_61037_length_269_cov_1.495726_g53097_i0forward_frame_2 - 0.062 13.9 1.5 0.062 13.9 1.5 1.5 2 0 0 2 2 2 0 TMC domain Endonuc-PvuII PF09225.10 NODE_61034_length_269_cov_1.529915_g53094_i0reverse_frame_3 - 0.072 12.9 0.0 0.079 12.7 0.0 1.2 1 0 0 1 1 1 0 Restriction endonuclease PvuII FBPase_2 PF06874.11 NODE_61030_length_269_cov_1.589744_g53090_i0reverse_frame_2 - 0.12 10.6 0.0 0.15 10.4 0.0 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase YfiO PF13525.6 NODE_61027_length_269_cov_1.628205_g53087_i0reverse_frame_3 - 2.9e-26 92.5 2.5 3.3e-26 92.3 2.5 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein Peptidase_M15_2 PF05951.13 NODE_61027_length_269_cov_1.628205_g53087_i0reverse_frame_3 - 0.058 13.1 0.1 0.063 12.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF882) Nodulin_late PF07127.11 NODE_61021_length_269_cov_1.705128_g53081_i0reverse_frame_3 - 0.14 12.5 3.7 0.22 11.9 3.7 1.4 1 0 0 1 1 1 0 Late nodulin protein TMEM100 PF16311.5 NODE_61021_length_269_cov_1.705128_g53081_i0forward_frame_3 - 1.4 8.5 4.8 1 9.0 3.8 1.3 1 1 0 1 1 1 0 Transmembrane protein 100 Arg_tRNA_synt_N PF03485.16 NODE_61020_length_269_cov_1.709402_g53080_i0forward_frame_3 - 1.2e-13 51.4 0.3 1.5e-13 51.1 0.3 1.1 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain CCG PF02754.16 NODE_61020_length_269_cov_1.709402_g53080_i0forward_frame_3 - 0.14 12.4 0.0 0.18 12.0 0.0 1.4 1 1 0 1 1 1 0 Cysteine-rich domain Aft1_HRR PF11787.8 NODE_61016_length_269_cov_1.739316_g53076_i0reverse_frame_3 - 0.043 15.0 0.2 0.05 14.8 0.2 1.2 1 0 0 1 1 1 0 Aft1 HRR domain Redoxin PF08534.10 NODE_61012_length_269_cov_1.773504_g53072_i0forward_frame_3 - 0.045 13.5 0.1 0.049 13.3 0.1 1.2 1 0 0 1 1 1 0 Redoxin POC3_POC4 PF10448.9 NODE_61006_length_269_cov_1.829060_g53066_i0reverse_frame_3 - 0.036 14.1 0.1 0.045 13.8 0.1 1.2 1 0 0 1 1 1 0 20S proteasome chaperone assembly proteins 3 and 4 DUF3804 PF12707.7 NODE_61005_length_269_cov_1.829060_g53065_i0forward_frame_3 - 0.0052 16.5 0.2 0.0061 16.3 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3804) KIAA1430 PF13879.6 NODE_61004_length_269_cov_1.833333_g53064_i0forward_frame_3 - 0.00089 20.0 0.4 0.00099 19.8 0.4 1.1 1 0 0 1 1 1 1 KIAA1430 homologue FtsX PF02687.21 NODE_61003_length_269_cov_1.850427_g53063_i0reverse_frame_2 - 0.072 13.6 6.1 0.082 13.4 6.1 1.1 1 0 0 1 1 1 0 FtsX-like permease family Sprouty PF05210.13 NODE_61003_length_269_cov_1.850427_g53063_i0forward_frame_3 - 0.095 13.1 5.8 0.14 12.6 5.6 1.4 1 1 0 1 1 1 0 Sprouty protein (Spry) ETRAMP PF09716.10 NODE_61003_length_269_cov_1.850427_g53063_i0forward_frame_2 - 0.048 13.7 1.0 0.062 13.4 1.0 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Inhibitor_I67 PF11405.8 NODE_61001_length_269_cov_1.880342_g53061_i0reverse_frame_2 - 0.55 10.5 4.5 0.94 9.8 4.5 1.3 1 0 0 1 1 1 0 Bromelain inhibitor VI Herpes_LMP2 PF07415.11 NODE_61000_length_269_cov_1.905983_g53060_i0reverse_frame_2 - 0.072 11.9 4.6 0.081 11.7 4.6 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein SNF2_N PF00176.23 NODE_60999_length_269_cov_1.948718_g53059_i0forward_frame_2 - 0.0003 19.6 0.0 0.00034 19.4 0.0 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF444 PF04285.12 NODE_60999_length_269_cov_1.948718_g53059_i0forward_frame_2 - 0.13 11.4 0.4 0.13 11.3 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF444) FUSC-like PF12805.7 NODE_60992_length_269_cov_2.136752_g53052_i0forward_frame_3 - 2.3e-25 89.2 0.6 2.5e-25 89.1 0.6 1.0 1 0 0 1 1 1 1 FUSC-like inner membrane protein yccS HOCHOB PF17943.1 NODE_60992_length_269_cov_2.136752_g53052_i0forward_frame_3 - 0.057 14.1 0.1 0.066 13.9 0.1 1.1 1 0 0 1 1 1 0 Homeobox-cysteine loop-homeobox DUF1507 PF07408.11 NODE_60990_length_269_cov_2.226496_g53050_i0reverse_frame_3 - 0.24 11.3 0.0 0.29 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1507) DUF2575 PF10837.8 NODE_60988_length_269_cov_2.260684_g53048_i0reverse_frame_3 - 0.07 13.4 0.9 0.1 12.9 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2575) DUF2829 PF11195.8 NODE_60988_length_269_cov_2.260684_g53048_i0reverse_frame_2 - 0.16 12.2 0.1 0.42 10.9 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2829) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks300.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks300.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks300.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks300.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Lysis_col PF02402.16 NODE_60988_length_269_cov_2.260684_g53048_i0forward_frame_2 - 1.6 8.5 3.7 6.2 6.6 2.6 2.0 2 0 0 2 2 2 0 Lysis protein Surface_antigen PF11054.8 NODE_60985_length_269_cov_2.282051_g53045_i0reverse_frame_2 - 0.047 13.4 0.1 0.059 13.0 0.1 1.2 1 0 0 1 1 1 0 Sporozoite TA4 surface antigen EII-GUT PF03608.13 NODE_60985_length_269_cov_2.282051_g53045_i0forward_frame_2 - 5.2e-41 140.3 0.6 5.6e-41 140.2 0.6 1.0 1 0 0 1 1 1 1 PTS system enzyme II sorbitol-specific factor Sigma54_activat PF00158.26 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_3 - 8.6e-34 116.7 0.5 9.4e-34 116.5 0.5 1.0 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_3 - 3.7e-11 43.3 0.0 4.3e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_3 - 0.00065 19.7 0.1 0.0022 18.0 0.1 1.7 1 1 1 2 2 2 1 AAA domain (dynein-related subfamily) AAA_PrkA PF08298.11 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_3 - 0.079 11.9 0.0 0.094 11.6 0.0 1.0 1 0 0 1 1 1 0 PrkA AAA domain HutD PF05962.11 NODE_60983_length_269_cov_2.294872_g53043_i0forward_frame_2 - 0.02 14.9 0.3 0.027 14.5 0.3 1.1 1 0 0 1 1 1 0 HutD TPR_10 PF13374.6 NODE_60981_length_269_cov_2.376068_g53041_i0reverse_frame_2 - 0.047 13.6 0.1 0.087 12.7 0.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Gamma-thionin PF00304.20 NODE_60980_length_269_cov_2.478632_g53040_i0reverse_frame_3 - 9.4 6.6 12.6 0.1 12.8 5.6 1.5 2 0 0 2 2 2 0 Gamma-thionin family Phage_Gp19 PF09355.10 NODE_60980_length_269_cov_2.478632_g53040_i0reverse_frame_2 - 0.15 12.5 0.3 2.8 8.4 0.0 2.0 1 1 1 2 2 2 0 Phage protein Gp19/Gp15/Gp42 KAAG1 PF15354.6 NODE_60979_length_269_cov_2.508547_g53039_i0reverse_frame_2 - 0.11 13.1 1.3 0.16 12.5 1.3 1.3 1 0 0 1 1 1 0 Kidney-associated antigen 1 SAB PF04382.13 NODE_60979_length_269_cov_2.508547_g53039_i0forward_frame_2 - 0.54 10.4 3.1 2.8 8.1 0.0 2.2 2 0 0 2 2 2 0 SAB domain Resolvase PF00239.21 NODE_60978_length_269_cov_2.534188_g53038_i0reverse_frame_2 - 0.17 12.0 0.1 0.19 11.8 0.1 1.2 1 0 0 1 1 1 0 Resolvase, N terminal domain Acid_PPase PF12689.7 NODE_60974_length_269_cov_2.615385_g53034_i0reverse_frame_3 - 0.077 12.8 0.4 0.097 12.5 0.4 1.1 1 0 0 1 1 1 0 Acid Phosphatase Tudor_4 PF18358.1 NODE_60972_length_269_cov_2.653846_g53032_i0forward_frame_3 - 0.026 14.1 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 Histone methyltransferase Tudor domain p450 PF00067.22 NODE_60972_length_269_cov_2.653846_g53032_i0forward_frame_2 - 2.4e-08 33.2 0.0 2.6e-08 33.1 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Inhibitor_I29 PF08246.12 NODE_60971_length_269_cov_2.679487_g53031_i0forward_frame_2 - 0.19 12.2 2.2 0.43 11.0 0.2 2.0 1 1 1 2 2 2 0 Cathepsin propeptide inhibitor domain (I29) AAA_lid_1 PF17857.1 NODE_60970_length_269_cov_2.752137_g53030_i0reverse_frame_3 - 0.04 14.1 1.5 0.1 12.8 1.3 1.7 1 1 1 2 2 2 0 AAA+ lid domain polyprenyl_synt PF00348.17 NODE_60964_length_269_cov_3.004274_g53024_i0reverse_frame_3 - 0.076 12.1 0.0 0.092 11.8 0.0 1.0 1 0 0 1 1 1 0 Polyprenyl synthetase Kelch_5 PF13854.6 NODE_60961_length_269_cov_3.226496_g53021_i0reverse_frame_2 - 0.15 12.1 0.0 0.3 11.1 0.0 1.5 1 0 0 1 1 1 0 Kelch motif UCR_hinge PF02320.16 NODE_60961_length_269_cov_3.226496_g53021_i0forward_frame_2 - 0.0067 16.6 0.1 0.011 15.9 0.1 1.4 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein DUF1673 PF07895.11 NODE_60960_length_269_cov_3.247863_g53020_i0reverse_frame_3 - 8.7 6.0 9.4 0.88 9.2 4.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1673) Antimicrobial_7 PF08102.11 NODE_60960_length_269_cov_3.247863_g53020_i0forward_frame_2 - 0.84 9.9 5.4 2.5 8.4 4.3 2.3 2 1 0 2 2 2 0 Scorpion antimicrobial peptide Peptidase_M28 PF04389.17 NODE_60959_length_269_cov_3.264957_g53019_i0forward_frame_2 - 9.5e-13 48.3 0.1 1.2e-12 48.0 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M42 PF05343.14 NODE_60959_length_269_cov_3.264957_g53019_i0forward_frame_2 - 0.041 12.9 0.0 6.1 5.8 0.0 2.0 2 0 0 2 2 2 0 M42 glutamyl aminopeptidase TraD PF06412.11 NODE_60959_length_269_cov_3.264957_g53019_i0forward_frame_2 - 0.14 12.0 0.4 0.59 10.0 0.3 1.9 1 1 1 2 2 2 0 Conjugal transfer protein TraD zf-CDGSH PF09360.10 NODE_60957_length_269_cov_3.405983_g53017_i0forward_frame_3 - 0.087 13.1 0.1 0.087 13.1 0.1 1.7 2 0 0 2 2 2 0 Iron-binding zinc finger CDGSH type RbsD_FucU PF05025.13 NODE_60957_length_269_cov_3.405983_g53017_i0forward_frame_2 - 1.4e-22 80.6 0.1 1.6e-22 80.3 0.1 1.0 1 0 0 1 1 1 1 RbsD / FucU transport protein family TRIF-NTD PF17798.1 NODE_60956_length_269_cov_3.641026_g53016_i0reverse_frame_2 - 0.092 12.8 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 TRIF N-terminal domain F-box PF00646.33 NODE_60949_length_269_cov_33.824786_g53009_i0reverse_frame_3 - 0.036 14.0 0.2 0.036 14.0 0.2 1.8 2 0 0 2 2 2 0 F-box domain MAP17 PF15807.5 NODE_60948_length_269_cov_33.867521_g53008_i0reverse_frame_3 - 0.29 11.4 8.5 0.34 11.1 8.5 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 POPLD PF08170.12 NODE_60948_length_269_cov_33.867521_g53008_i0reverse_frame_3 - 2.5 8.5 7.0 3.6 8.0 7.0 1.4 1 1 0 1 1 1 0 POPLD (NUC188) domain Presenilin PF01080.17 NODE_60948_length_269_cov_33.867521_g53008_i0reverse_frame_3 - 5.5 5.6 6.2 6.1 5.5 6.2 1.0 1 0 0 1 1 1 0 Presenilin E2F_TDP PF02319.20 NODE_60948_length_269_cov_33.867521_g53008_i0reverse_frame_2 - 0.011 15.8 0.4 0.016 15.2 0.4 1.2 1 0 0 1 1 1 0 E2F/DP family winged-helix DNA-binding domain DUF2527 PF10736.9 NODE_60943_length_269_cov_43.893162_g53003_i0reverse_frame_2 - 0.11 12.3 2.8 0.16 11.8 2.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) Rota_NS6 PF04866.12 NODE_60939_length_269_cov_49.196581_g52999_i0forward_frame_2 - 0.018 15.2 0.5 0.022 14.9 0.3 1.4 1 1 0 1 1 1 0 Rotavirus non-structural protein 6 SnoaL PF07366.12 NODE_60938_length_269_cov_49.320513_g52998_i0reverse_frame_2 - 3.6e-06 26.8 0.2 4.8e-06 26.4 0.2 1.2 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase Pneumo_M2 PF07380.11 NODE_60934_length_269_cov_56.820513_g52994_i0reverse_frame_2 - 0.053 13.8 1.5 0.1 12.9 1.5 1.5 1 1 0 1 1 1 0 Pneumovirus M2 protein Ribosomal_L1 PF00687.21 NODE_60932_length_269_cov_61.196581_g52992_i0reverse_frame_2 - 5.5e-14 52.4 0.4 6e-14 52.3 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family TetR PF13972.6 NODE_60932_length_269_cov_61.196581_g52992_i0reverse_frame_2 - 0.0044 16.7 0.0 0.0052 16.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial transcriptional repressor Ndr PF03096.14 NODE_60932_length_269_cov_61.196581_g52992_i0reverse_frame_2 - 0.052 12.2 0.0 0.053 12.2 0.0 1.1 1 0 0 1 1 1 0 Ndr family Corazonin PF17308.2 NODE_60931_length_269_cov_62.282051_g52991_i0reverse_frame_2 - 0.12 12.7 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Pro-corazonin Rhomboid_SP PF12595.8 NODE_60930_length_269_cov_62.717949_g52990_i0forward_frame_2 - 0.026 13.9 2.8 0.028 13.8 2.8 1.1 1 0 0 1 1 1 0 Rhomboid serine protease DUF2799 PF10973.8 NODE_60928_length_269_cov_67.534188_g52988_i0reverse_frame_2 - 0.14 12.6 0.0 0.18 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2799) SWIRM-assoc_1 PF16495.5 NODE_60927_length_269_cov_67.623932_g52987_i0reverse_frame_2 - 3e-09 36.7 1.6 3e-09 36.7 1.6 1.5 2 0 0 2 2 2 1 SWIRM-associated region 1 FliJ PF02050.16 NODE_60927_length_269_cov_67.623932_g52987_i0reverse_frame_2 - 0.017 15.4 7.3 0.028 14.6 7.3 1.3 1 1 0 1 1 1 0 Flagellar FliJ protein DSPc PF00782.20 NODE_60926_length_269_cov_70.414530_g52986_i0forward_frame_3 - 7.3e-10 38.8 0.1 9.3e-10 38.4 0.1 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_60926_length_269_cov_70.414530_g52986_i0forward_frame_3 - 0.0012 18.4 0.0 0.0014 18.3 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 NODE_60926_length_269_cov_70.414530_g52986_i0forward_frame_3 - 0.044 13.8 0.0 0.047 13.6 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family VirE_N PF08800.10 NODE_60926_length_269_cov_70.414530_g52986_i0forward_frame_3 - 0.061 13.5 0.1 0.071 13.2 0.1 1.1 1 0 0 1 1 1 0 VirE N-terminal domain DUF390 PF04094.14 NODE_60924_length_269_cov_73.102564_g52984_i0forward_frame_3 - 0.034 12.5 0.0 0.036 12.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) DUF4447 PF14590.6 NODE_60922_length_269_cov_83.012821_g52982_i0reverse_frame_3 - 0.096 12.5 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4447) MutS_V PF00488.21 NODE_60922_length_269_cov_83.012821_g52982_i0forward_frame_2 - 1.8e-07 31.3 0.0 2.3e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 MutS domain V Flu_M2 PF00599.17 NODE_60920_length_269_cov_94.179487_g52980_i0reverse_frame_2 - 0.07 13.2 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 Influenza Matrix protein (M2) SpoVS PF04232.12 NODE_60920_length_269_cov_94.179487_g52980_i0forward_frame_3 - 0.22 11.2 0.0 0.29 10.9 0.0 1.1 1 0 0 1 1 1 0 Stage V sporulation protein S (SpoVS) AGTRAP PF06396.11 NODE_60918_length_269_cov_97.106838_g52978_i0reverse_frame_3 - 0.064 13.0 0.0 0.079 12.8 0.0 1.0 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) DUF2929 PF11151.8 NODE_60918_length_269_cov_97.106838_g52978_i0forward_frame_3 - 0.15 12.4 2.7 0.21 11.9 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2929) MAR_sialic_bdg PF10564.9 NODE_60914_length_269_cov_126.076923_g52974_i0reverse_frame_3 - 2.9 8.0 14.6 4.1 7.5 4.1 2.1 1 1 1 2 2 2 0 Sialic-acid binding micronemal adhesive repeat FAF PF11250.8 NODE_60914_length_269_cov_126.076923_g52974_i0reverse_frame_2 - 0.15 12.3 0.6 0.22 11.8 0.6 1.3 1 0 0 1 1 1 0 Fantastic Four meristem regulator MCLC PF05934.11 NODE_60914_length_269_cov_126.076923_g52974_i0forward_frame_3 - 0.13 11.0 0.7 0.13 10.9 0.7 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Rep_1B PF17873.1 NODE_60913_length_269_cov_132.529915_g52973_i0reverse_frame_2 - 0.23 11.3 1.0 1.4 8.9 0.0 2.1 2 0 0 2 2 2 0 Replicase polyprotein 1ab Cadherin_tail PF15974.5 NODE_60912_length_269_cov_141.457265_g52972_i0forward_frame_3 - 1.3 9.3 5.6 1.4 9.2 5.6 1.3 1 1 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region HK_sensor PF16750.5 NODE_60910_length_269_cov_146.641026_g52970_i0reverse_frame_3 - 0.031 14.6 0.0 0.037 14.3 0.0 1.1 1 0 0 1 1 1 0 Sensor domain of 2-component histidine kinase ATP-cone PF03477.16 NODE_60910_length_269_cov_146.641026_g52970_i0reverse_frame_3 - 0.048 14.2 1.4 0.059 14.0 1.4 1.1 1 0 0 1 1 1 0 ATP cone domain SpoVIF PF14069.6 NODE_60910_length_269_cov_146.641026_g52970_i0reverse_frame_3 - 0.065 13.0 2.2 0.089 12.6 2.2 1.4 1 1 0 1 1 1 0 Stage VI sporulation protein F Agouti PF05039.12 NODE_60910_length_269_cov_146.641026_g52970_i0reverse_frame_3 - 5.3 7.8 6.4 18 6.2 6.4 2.0 1 1 0 1 1 1 0 Agouti protein NADH_4Fe-4S PF10589.9 NODE_60902_length_269_cov_198.705128_g52962_i0reverse_frame_3 - 0.056 13.5 0.2 0.065 13.3 0.2 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ctr PF04145.15 NODE_60899_length_269_cov_291.363248_g52959_i0reverse_frame_2 - 0.0094 16.6 0.1 0.011 16.4 0.1 1.0 1 0 0 1 1 1 1 Ctr copper transporter family DUF4834 PF16118.5 NODE_60899_length_269_cov_291.363248_g52959_i0reverse_frame_2 - 0.11 13.5 0.1 0.14 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Nanovirus_coat PF04660.12 NODE_60899_length_269_cov_291.363248_g52959_i0reverse_frame_2 - 0.15 12.1 0.4 0.21 11.6 0.4 1.3 1 0 0 1 1 1 0 Nanovirus coat protein YjcB PF15940.5 NODE_60888_length_270_cov_0.910638_g52948_i0reverse_frame_3 - 0.04 14.1 0.2 0.044 13.9 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function TBCC PF07986.12 NODE_60885_length_270_cov_1.021277_g52945_i0forward_frame_2 - 7.3e-05 22.5 4.4 9.3e-05 22.1 4.4 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor C GPR15L PF15854.5 NODE_60880_length_270_cov_1.127660_g52940_i0forward_frame_3 - 0.15 12.3 1.5 0.23 11.7 1.5 1.3 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 Shisa PF13908.6 NODE_60878_length_270_cov_1.234043_g52938_i0reverse_frame_2 - 0.0096 16.2 3.6 0.012 15.9 3.6 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF2650 PF10853.8 NODE_60878_length_270_cov_1.234043_g52938_i0reverse_frame_2 - 0.021 14.5 5.0 0.032 13.9 5.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) AMP-binding_C PF13193.6 NODE_60874_length_270_cov_1.327660_g52934_i0reverse_frame_3 - 7.4e-16 58.9 0.2 9e-16 58.6 0.2 1.1 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain YrhC PF14143.6 NODE_60873_length_270_cov_1.344681_g52933_i0forward_frame_3 - 0.045 13.8 2.0 0.067 13.3 2.0 1.4 1 0 0 1 1 1 0 YrhC-like protein MBD PF01429.19 NODE_60870_length_270_cov_1.361702_g52930_i0reverse_frame_3 - 0.00072 19.2 0.0 0.001 18.7 0.0 1.2 1 0 0 1 1 1 1 Methyl-CpG binding domain DUF2735 PF10931.8 NODE_60870_length_270_cov_1.361702_g52930_i0reverse_frame_3 - 0.014 16.0 0.3 0.034 14.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2735) SCIFF PF13165.6 NODE_60870_length_270_cov_1.361702_g52930_i0reverse_frame_2 - 0.029 14.3 4.5 0.029 14.3 4.5 1.7 2 0 0 2 2 2 0 Six-cysteine peptide SCIFF DUF3094 PF11293.8 NODE_60863_length_270_cov_1.519149_g52923_i0forward_frame_3 - 0.14 11.9 0.5 0.21 11.3 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) PDE4_UCR PF18100.1 NODE_60862_length_270_cov_1.540426_g52922_i0reverse_frame_3 - 0.1 13.3 0.0 0.47 11.1 0.0 1.8 2 0 0 2 2 2 0 Phosphodiesterase 4 upstream conserved regions (UCR) dDENN PF03455.19 NODE_60862_length_270_cov_1.540426_g52922_i0reverse_frame_2 - 0.09 12.8 0.2 0.09 12.8 0.2 1.8 3 0 0 3 3 3 0 dDENN domain Ephrin_rec_like PF07699.13 NODE_60862_length_270_cov_1.540426_g52922_i0forward_frame_2 - 0.0008 19.1 1.1 0.0017 18.1 1.1 1.6 1 0 0 1 1 1 1 Putative ephrin-receptor like NCD3G PF07562.14 NODE_60862_length_270_cov_1.540426_g52922_i0forward_frame_2 - 0.076 13.0 5.3 0.26 11.3 5.3 1.8 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_60862_length_270_cov_1.540426_g52922_i0forward_frame_2 - 0.1 13.0 4.1 0.19 12.1 1.7 2.2 1 1 0 2 2 2 0 TNFR/NGFR cysteine-rich region DUF2318 PF10080.9 NODE_60862_length_270_cov_1.540426_g52922_i0forward_frame_2 - 0.13 12.3 3.1 0.24 11.5 2.6 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) Tudor_4 PF18358.1 NODE_60860_length_270_cov_1.608511_g52920_i0reverse_frame_2 - 2.9e-05 23.6 1.2 0.0014 18.1 0.1 2.2 2 0 0 2 2 2 2 Histone methyltransferase Tudor domain Tudor-knot PF11717.8 NODE_60860_length_270_cov_1.608511_g52920_i0reverse_frame_2 - 0.0005 19.9 0.1 0.01 15.7 0.0 2.7 2 1 0 2 2 2 1 RNA binding activity-knot of a chromodomain MBT PF02820.18 NODE_60860_length_270_cov_1.608511_g52920_i0reverse_frame_2 - 0.0015 18.8 0.2 0.003 17.9 0.0 1.6 2 0 0 2 2 2 1 mbt repeat SAWADEE PF16719.5 NODE_60860_length_270_cov_1.608511_g52920_i0reverse_frame_2 - 0.0071 16.4 0.1 0.012 15.6 0.0 1.4 1 1 0 1 1 1 1 SAWADEE domain DUF5634_N PF18672.1 NODE_60860_length_270_cov_1.608511_g52920_i0reverse_frame_2 - 0.015 15.0 0.0 0.018 14.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5634) Hfq PF17209.3 NODE_60860_length_270_cov_1.608511_g52920_i0forward_frame_3 - 0.094 12.4 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 Hfq protein Levi_coat PF01819.17 NODE_60858_length_270_cov_1.655319_g52918_i0reverse_frame_3 - 0.011 15.8 0.0 0.013 15.5 0.0 1.0 1 0 0 1 1 1 0 Levivirus coat protein Fungal_KA1 PF16797.5 NODE_60858_length_270_cov_1.655319_g52918_i0reverse_frame_3 - 0.061 13.0 0.0 0.066 12.9 0.0 1.1 1 0 0 1 1 1 0 Fungal kinase associated-1 domain HisKA_7TM PF16927.5 NODE_60858_length_270_cov_1.655319_g52918_i0forward_frame_2 - 0.027 14.5 1.5 0.03 14.3 1.5 1.0 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase HJURP_C PF12347.8 NODE_60856_length_270_cov_1.697872_g52916_i0forward_frame_2 - 0.023 14.7 0.2 0.038 14.0 0.2 1.3 1 0 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat DUF2407_C PF13373.6 NODE_60855_length_270_cov_1.706383_g52915_i0forward_frame_3 - 0.35 11.1 1.3 0.4 10.9 1.3 1.3 1 0 0 1 1 1 0 DUF2407 C-terminal domain Methyltransf_14 PF08484.11 NODE_60854_length_270_cov_1.710638_g52914_i0forward_frame_3 - 0.017 15.0 0.0 0.018 14.9 0.0 1.0 1 0 0 1 1 1 0 C-methyltransferase C-terminal domain zf_Rg PF17915.1 NODE_60852_length_270_cov_1.740426_g52912_i0forward_frame_2 - 0.51 9.8 6.5 0.81 9.1 3.6 2.1 1 1 1 2 2 2 0 Reverse gyrase zinc finger HDAC4_Gln PF12203.8 NODE_60851_length_270_cov_1.761702_g52911_i0reverse_frame_2 - 0.015 15.5 4.9 0.019 15.1 4.9 1.1 1 0 0 1 1 1 0 Glutamine rich N terminal domain of histone deacetylase 4 FAP PF07174.11 NODE_60849_length_270_cov_1.770213_g52909_i0reverse_frame_2 - 1.1 8.6 8.7 1.3 8.4 8.7 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_60849_length_270_cov_1.770213_g52909_i0forward_frame_3 - 0.0079 16.2 4.5 0.0096 15.9 4.5 1.2 1 0 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_60849_length_270_cov_1.770213_g52909_i0forward_frame_2 - 0.03 14.3 7.3 0.069 13.1 7.2 1.5 1 1 0 1 1 1 0 Lamprin Chorion_1 PF01723.16 NODE_60849_length_270_cov_1.770213_g52909_i0forward_frame_2 - 0.71 9.8 6.6 1 9.3 6.6 1.3 1 1 0 1 1 1 0 Chorion protein Ribosomal_L4 PF00573.22 NODE_60848_length_270_cov_1.782979_g52908_i0forward_frame_2 - 0.38 10.4 2.2 0.41 10.3 2.2 1.1 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family FIIND PF13553.6 NODE_60845_length_270_cov_1.834043_g52905_i0forward_frame_3 - 0.055 12.9 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 Function to find TMEM189_B_dmain PF10520.9 NODE_60843_length_270_cov_1.919149_g52903_i0reverse_frame_2 - 0.057 13.5 1.4 0.065 13.4 1.4 1.1 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain DUF4806 PF16064.5 NODE_60839_length_270_cov_2.004255_g52899_i0forward_frame_3 - 0.2 12.0 0.0 0.27 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4806) DUF3645 PF12359.8 NODE_60838_length_270_cov_2.017021_g52898_i0reverse_frame_2 - 0.023 14.1 0.0 0.25 10.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3645) DnaJ PF00226.31 NODE_60838_length_270_cov_2.017021_g52898_i0reverse_frame_2 - 0.034 14.3 0.0 0.047 13.8 0.0 1.2 1 0 0 1 1 1 0 DnaJ domain DUF3391 PF11871.8 NODE_60835_length_270_cov_2.055319_g52895_i0forward_frame_3 - 0.00056 20.5 4.9 0.00063 20.3 4.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3391) MecA PF05389.12 NODE_60835_length_270_cov_2.055319_g52895_i0forward_frame_3 - 0.022 14.4 0.8 0.022 14.4 0.8 1.0 1 0 0 1 1 1 0 Negative regulator of genetic competence (MecA) DAHP_synth_2 PF01474.16 NODE_60833_length_270_cov_2.080851_g52893_i0reverse_frame_2 - 2.4e-06 26.3 0.2 2.5e-06 26.3 0.2 1.1 1 0 0 1 1 1 1 Class-II DAHP synthetase family BCNT PF07572.12 NODE_60833_length_270_cov_2.080851_g52893_i0reverse_frame_2 - 0.017 15.1 0.4 0.024 14.7 0.4 1.2 1 0 0 1 1 1 0 Bucentaur or craniofacial development GldM_N PF12081.8 NODE_60833_length_270_cov_2.080851_g52893_i0reverse_frame_2 - 0.052 13.6 0.1 0.056 13.5 0.1 1.1 1 0 0 1 1 1 0 GldM N-terminal domain Spore_YhaL PF14147.6 NODE_60833_length_270_cov_2.080851_g52893_i0reverse_frame_2 - 0.2 11.4 2.2 11 5.9 0.0 2.6 1 1 2 3 3 3 0 Sporulation protein YhaL Hydantoinase_B PF02538.14 NODE_60832_length_270_cov_2.085106_g52892_i0reverse_frame_3 - 0.06 11.7 0.0 0.074 11.5 0.0 1.1 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase DUF2318 PF10080.9 NODE_60832_length_270_cov_2.085106_g52892_i0forward_frame_2 - 0.014 15.5 0.1 0.016 15.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) DsrC PF04358.13 NODE_60826_length_270_cov_2.255319_g52886_i0forward_frame_2 - 2.1e-34 118.3 0.0 2.2e-34 118.2 0.0 1.0 1 0 0 1 1 1 1 DsrC like protein C2 PF00168.30 NODE_60824_length_270_cov_2.391489_g52884_i0reverse_frame_3 - 2.4e-09 37.4 0.0 2.6e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 C2 domain C2 PF00168.30 NODE_60824_length_270_cov_2.391489_g52884_i0reverse_frame_2 - 2.1e-05 24.7 0.0 2.5e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 C2 domain CRISPR_Cse2 PF09485.10 NODE_60823_length_270_cov_2.404255_g52883_i0reverse_frame_3 - 0.008 16.7 0.0 0.0095 16.5 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Cse2 (CRISPR_cse2) Ribosomal_L11 PF00298.19 NODE_60823_length_270_cov_2.404255_g52883_i0reverse_frame_2 - 0.029 14.9 0.1 0.034 14.6 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain DUF2649 PF10854.8 NODE_60823_length_270_cov_2.404255_g52883_i0forward_frame_2 - 0.0089 16.3 2.5 0.014 15.7 2.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2649) EC042_2821 PF18740.1 NODE_60822_length_270_cov_2.421277_g52882_i0reverse_frame_2 - 0.088 12.7 0.2 0.09 12.7 0.2 1.1 1 0 0 1 1 1 0 EC042_2821-lke REase Pyridoxal_deC PF00282.19 NODE_60822_length_270_cov_2.421277_g52882_i0forward_frame_2 - 0.0059 15.4 0.0 0.0066 15.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain SDF PF00375.18 NODE_60818_length_270_cov_2.655319_g52878_i0forward_frame_3 - 6.9e-21 74.7 2.7 7.4e-21 74.6 2.7 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family TMEMspv1-c74-12 PF11044.8 NODE_60818_length_270_cov_2.655319_g52878_i0forward_frame_3 - 0.48 10.5 2.8 0.72 9.9 2.8 1.4 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein ERp29 PF07749.12 NODE_60816_length_270_cov_2.706383_g52876_i0reverse_frame_2 - 0.23 12.4 3.4 2.1 9.3 0.1 2.0 1 1 1 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain E1_UFD PF09358.10 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_3 - 0.11 13.2 0.0 0.22 12.3 0.0 1.5 1 1 0 1 1 1 0 Ubiquitin fold domain Baculo_PEP_C PF04513.12 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_2 - 0.037 14.1 1.4 0.045 13.8 1.4 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Streptin-Immun PF11083.8 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_2 - 0.044 14.2 2.1 0.16 12.4 0.5 2.1 1 1 1 2 2 2 0 Lantibiotic streptin immunity protein Prominin PF05478.11 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_2 - 0.05 11.6 1.2 0.055 11.4 1.2 1.0 1 0 0 1 1 1 0 Prominin Fib_alpha PF08702.10 NODE_60815_length_270_cov_2.714894_g52875_i0forward_frame_2 - 0.2 11.9 2.0 0.24 11.6 2.0 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family NFACT-R_1 PF05670.13 NODE_60813_length_270_cov_2.757447_g52873_i0reverse_frame_2 - 9.8e-15 55.1 0.0 1.5e-14 54.5 0.0 1.3 1 0 0 1 1 1 1 NFACT protein RNA binding domain BatD PF13584.6 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.0038 16.1 2.5 0.0044 15.9 2.5 1.0 1 0 0 1 1 1 1 Oxygen tolerance TMEM154 PF15102.6 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.0048 16.8 8.2 0.0063 16.4 8.2 1.2 1 0 0 1 1 1 1 TMEM154 protein family DUF2207 PF09972.9 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.0096 14.7 0.3 0.0098 14.7 0.3 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Orf78 PF06024.12 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.078 13.3 0.1 0.12 12.7 0.0 1.3 1 1 0 1 1 1 0 Orf78 (ac78) Stevor PF17410.2 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.12 11.9 3.0 0.15 11.6 3.0 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF3377 PF11857.8 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.17 11.8 6.8 0.063 13.2 2.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) DUF4013 PF13197.6 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.19 11.6 9.4 0.23 11.3 9.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) DUF5305 PF17231.2 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.65 9.4 6.0 0.91 8.9 6.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5305) TMEM251 PF15190.6 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 0.95 9.4 6.8 1.1 9.2 6.8 1.3 1 1 0 1 1 1 0 Transmembrane protein 251 DUF5383 PF17355.2 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 1.5 9.2 4.4 2.3 8.6 4.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5383) Pox_EPC_I2-L1 PF12575.8 NODE_60809_length_270_cov_3.000000_g52869_i0reverse_frame_2 - 3.2 8.0 5.9 1.2 9.5 2.5 2.0 2 0 0 2 2 2 0 Poxvirus entry protein complex L1 and I2 DUF3283 PF11686.8 NODE_60808_length_270_cov_3.123404_g52868_i0forward_frame_2 - 0.072 12.9 0.4 0.099 12.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3283) NDUF_B6 PF09782.9 NODE_60807_length_270_cov_3.225532_g52867_i0reverse_frame_3 - 0.17 12.0 0.5 0.19 11.8 0.5 1.0 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit TIG PF01833.24 NODE_60805_length_270_cov_3.336170_g52865_i0reverse_frame_3 - 0.058 13.5 0.0 0.074 13.1 0.0 1.3 1 0 0 1 1 1 0 IPT/TIG domain DUF4024 PF13216.6 NODE_60805_length_270_cov_3.336170_g52865_i0reverse_frame_3 - 2.3 8.3 6.4 1.1 9.3 3.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4024) DUF334 PF03904.13 NODE_60803_length_270_cov_3.659574_g52863_i0reverse_frame_2 - 0.073 12.6 0.3 0.083 12.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) Gal-3-0_sulfotr PF06990.11 NODE_60802_length_270_cov_3.893617_g52862_i0reverse_frame_3 - 0.074 11.9 0.3 0.09 11.6 0.3 1.1 1 0 0 1 1 1 0 Galactose-3-O-sulfotransferase Autophagy_N PF03986.13 NODE_60802_length_270_cov_3.893617_g52862_i0forward_frame_2 - 0.058 13.3 0.0 0.075 13.0 0.0 1.1 1 0 0 1 1 1 0 Autophagocytosis associated protein (Atg3), N-terminal domain Serglycin PF04360.12 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_3 - 0.044 13.7 0.8 0.046 13.7 0.8 1.1 1 0 0 1 1 1 0 Serglycin DUF508 PF04370.12 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_3 - 0.056 13.2 4.2 0.064 13.0 4.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF508) AF-4 PF05110.13 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_3 - 0.22 9.6 10.3 0.2 9.7 10.3 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein SR-25 PF10500.9 NODE_60800_length_270_cov_8.085106_g52860_i0reverse_frame_3 - 2.6 7.6 18.6 2.8 7.5 18.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Mucin PF01456.17 NODE_60800_length_270_cov_8.085106_g52860_i0forward_frame_2 - 0.25 11.3 20.5 0.27 11.2 20.5 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein SSP160 PF06933.11 NODE_60800_length_270_cov_8.085106_g52860_i0forward_frame_2 - 1.5 7.0 19.2 1.5 6.9 19.2 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 SP24 PF16504.5 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_3 - 0.069 13.2 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 Putative virion membrane protein of plant and insect virus zf-C2H2 PF00096.26 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 6.9e-06 26.2 10.1 0.00066 20.0 3.7 3.0 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 1.5e-05 25.4 7.2 0.0023 18.6 1.0 3.2 2 1 1 3 3 3 2 C2H2-type zinc finger zf-C2H2_2 PF12756.7 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 5.4e-05 23.5 2.3 6.7e-05 23.2 2.3 1.3 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-C2HE PF16278.5 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.0009 19.6 8.2 0.001 19.5 3.1 2.2 1 1 1 2 2 2 1 C2HE / C2H2 / C2HC zinc-binding finger zf-H2C2_5 PF13909.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.00096 18.9 13.8 0.045 13.5 0.1 3.9 4 0 0 4 4 4 3 C2H2-type zinc-finger domain zf-C2H2_11 PF16622.5 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.0032 17.2 1.5 0.073 12.9 0.2 2.6 3 0 0 3 3 3 1 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.058 13.7 6.9 0.058 13.7 6.9 2.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding DM PF00751.18 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 0.083 12.8 6.5 1.3 9.0 6.3 2.3 1 1 0 1 1 1 0 DM DNA binding domain zf-C2H2_6 PF13912.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 1.1 9.3 13.0 0.092 12.8 4.0 2.7 3 0 0 3 3 3 0 C2H2-type zinc finger zf-BED PF02892.15 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 1.7 8.8 14.0 13 5.9 10.9 2.9 1 1 1 2 2 2 0 BED zinc finger zf-H2C2_2 PF13465.6 NODE_60798_length_270_cov_32.731915_g52858_i0reverse_frame_2 - 3.1 8.4 10.8 0.55 10.8 1.3 3.0 3 0 0 3 3 3 0 Zinc-finger double domain SRAP PF02586.14 NODE_60797_length_270_cov_35.068085_g52857_i0forward_frame_2 - 0.14 11.7 0.2 1.6 8.2 0.0 1.9 1 1 1 2 2 2 0 SOS response associated peptidase (SRAP) Focadhesin PF11229.8 NODE_60797_length_270_cov_35.068085_g52857_i0forward_frame_2 - 0.22 9.7 0.0 0.25 9.6 0.0 1.0 1 0 0 1 1 1 0 Focadhesin SNAD3 PF18749.1 NODE_60794_length_270_cov_44.093617_g52854_i0reverse_frame_3 - 0.055 12.6 0.2 0.068 12.3 0.2 1.0 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 3 Golgin_A5 PF09787.9 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.011 15.2 12.8 0.012 15.1 12.8 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 CortBP2 PF09727.9 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.018 15.0 8.4 0.018 15.0 8.4 2.0 1 1 1 2 2 2 0 Cortactin-binding protein-2 UPF0242 PF06785.11 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.045 13.9 11.2 0.05 13.7 11.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Rab5-bind PF09311.11 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.068 12.6 14.4 0.11 11.9 14.4 1.3 1 1 0 1 1 1 0 Rabaptin-like protein DUF473 PF04322.12 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.19 11.6 2.0 0.94 9.3 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF473) LodA_N PF17990.1 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.34 10.8 2.6 0.39 10.6 2.6 1.1 1 0 0 1 1 1 0 L-Lysine epsilon oxidase N-terminal Spc7 PF08317.11 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.39 9.6 16.7 0.48 9.3 16.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein PRKG1_interact PF15898.5 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 0.47 11.4 16.2 0.59 11.1 16.2 1.1 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain COG2 PF06148.11 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 2 8.5 9.3 1.4 9.0 8.0 1.4 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 LRS4 PF10422.9 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 5.1 6.6 16.0 5.5 6.5 16.0 1.1 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 TPD52 PF04201.15 NODE_60793_length_270_cov_45.263830_g52853_i0reverse_frame_2 - 9.6 5.8 17.7 0.2 11.2 6.7 2.0 1 1 1 2 2 2 0 Tumour protein D52 family RHD_DNA_bind PF00554.22 NODE_60792_length_270_cov_46.187234_g52852_i0forward_frame_2 - 0.05 13.5 0.0 0.063 13.2 0.0 1.2 1 0 0 1 1 1 0 Rel homology DNA-binding domain Dor1 PF04124.12 NODE_60791_length_270_cov_46.668085_g52851_i0reverse_frame_3 - 0.082 11.6 0.0 0.082 11.6 0.0 1.1 1 0 0 1 1 1 0 Dor1-like family CPSase_L_D2 PF02786.17 NODE_60789_length_270_cov_48.740426_g52849_i0reverse_frame_2 - 0.067 12.7 0.1 0.074 12.5 0.1 1.0 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain PH PF00169.29 NODE_60787_length_270_cov_54.225532_g52847_i0forward_frame_2 - 0.047 14.2 0.0 0.083 13.4 0.0 1.4 1 0 0 1 1 1 0 PH domain YMF19 PF02326.15 NODE_60784_length_270_cov_58.153191_g52844_i0reverse_frame_3 - 0.16 12.8 3.7 0.21 12.4 3.7 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 Pkinase PF00069.25 NODE_60784_length_270_cov_58.153191_g52844_i0forward_frame_3 - 0.00022 20.7 0.0 0.00026 20.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain SRP40_C PF05022.12 NODE_60783_length_270_cov_60.357447_g52843_i0forward_frame_3 - 0.013 16.3 0.7 0.013 16.3 0.7 1.6 2 0 0 2 2 2 0 SRP40, C-terminal domain PolC_DP2 PF03833.13 NODE_60778_length_270_cov_64.821277_g52838_i0forward_frame_3 - 2.6 5.8 7.4 2.8 5.7 7.4 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF2675 PF11247.8 NODE_60778_length_270_cov_64.821277_g52838_i0forward_frame_2 - 0.16 12.1 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2675) DUF1488 PF07369.11 NODE_60776_length_270_cov_66.480851_g52836_i0reverse_frame_3 - 0.067 13.2 0.2 0.076 13.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1488) LacY_symp PF01306.19 NODE_60776_length_270_cov_66.480851_g52836_i0forward_frame_2 - 0.063 12.1 0.6 0.067 12.0 0.6 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter CHD5 PF04420.14 NODE_60775_length_270_cov_66.753191_g52835_i0forward_frame_3 - 0.057 13.3 0.8 0.075 12.9 0.8 1.2 1 0 0 1 1 1 0 CHD5-like protein DUF4359 PF14271.6 NODE_60775_length_270_cov_66.753191_g52835_i0forward_frame_2 - 0.025 15.3 0.1 0.028 15.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4359) DUF1289 PF06945.13 NODE_60771_length_270_cov_74.574468_g52831_i0reverse_frame_2 - 0.27 11.1 6.3 0.4 10.5 2.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1289) SASRP1 PF15160.6 NODE_60770_length_270_cov_78.208511_g52830_i0reverse_frame_3 - 0.83 9.3 10.0 0.98 9.0 10.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 MORN PF02493.20 NODE_60766_length_270_cov_87.910638_g52826_i0reverse_frame_3 - 1.7e-09 37.0 15.0 4e-05 23.3 1.2 3.5 4 0 0 4 4 4 3 MORN repeat Integrase_H2C2 PF17921.1 NODE_60765_length_270_cov_89.204255_g52825_i0forward_frame_3 - 0.019 15.1 1.0 0.033 14.3 1.0 1.4 1 1 0 1 1 1 0 Integrase zinc binding domain DUF640 PF04852.12 NODE_60764_length_270_cov_93.370213_g52824_i0forward_frame_3 - 0.67 10.1 3.3 0.45 10.7 0.6 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF640) ATP-synt_8 PF00895.20 NODE_60763_length_270_cov_94.821277_g52823_i0reverse_frame_2 - 0.02 15.3 0.7 0.076 13.5 0.1 1.9 2 0 0 2 2 2 0 ATP synthase protein 8 DUF1600 PF07667.11 NODE_60760_length_270_cov_114.902128_g52820_i0reverse_frame_3 - 0.043 14.0 1.1 0.043 14.0 1.1 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF1600) Jacalin PF01419.17 NODE_60760_length_270_cov_114.902128_g52820_i0forward_frame_3 - 9e-07 28.9 0.1 1e-06 28.7 0.1 1.1 1 0 0 1 1 1 1 Jacalin-like lectin domain DNA_RNApol_7kD PF03604.13 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 6.2e-16 57.8 4.9 9.3e-16 57.2 4.9 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_10 PF10058.9 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.011 15.4 0.3 0.1 12.3 0.0 2.2 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-ribbon_3 PF13248.6 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.013 14.8 1.2 0.028 13.8 1.2 1.6 1 1 0 1 1 1 0 zinc-ribbon domain UPF0547 PF10571.9 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.022 14.8 0.6 0.068 13.3 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 MCM_OB PF17207.3 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.037 13.9 0.2 0.046 13.6 0.2 1.1 1 0 0 1 1 1 0 MCM OB domain HypA PF01155.19 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.046 13.7 0.1 0.057 13.5 0.1 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.05 13.6 0.2 0.081 13.0 0.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon Rubredoxin_2 PF18073.1 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.22 11.3 3.8 4.9 7.0 0.4 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain zinc_ribbon_2 PF13240.6 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.27 11.0 4.1 5.6 6.8 3.9 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zinc_ribbon_13 PF09855.9 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.28 11.4 3.4 0.28 11.4 0.1 2.4 2 1 1 3 3 3 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TF_Zn_Ribbon PF08271.12 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 0.58 9.7 3.7 1.6 8.3 0.2 2.4 1 1 2 3 3 2 0 TFIIB zinc-binding Mu-like_Com PF10122.9 NODE_60755_length_270_cov_171.651064_g52815_i0reverse_frame_3 - 1.2 8.6 5.2 2.3 7.7 0.1 2.8 2 1 1 3 3 3 0 Mu-like prophage protein Com DUF749 PF05370.11 NODE_60754_length_270_cov_173.165957_g52814_i0reverse_frame_2 - 0.011 15.8 2.1 0.017 15.2 1.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF749) DctQ PF04290.12 NODE_60750_length_270_cov_209.885106_g52810_i0forward_frame_3 - 0.35 10.8 2.0 0.71 9.8 0.1 1.9 2 0 0 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component Deltaretro_Tax PF05599.11 NODE_60748_length_270_cov_236.489362_g52808_i0reverse_frame_3 - 0.094 13.2 2.1 0.12 12.9 2.1 1.3 1 1 0 1 1 1 0 Deltaretrovirus Tax protein FGFR3_TM PF18123.1 NODE_60747_length_270_cov_265.280851_g52807_i0reverse_frame_2 - 0.58 9.7 14.8 1.2 8.7 3.5 2.7 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain Sel_put PF04328.13 NODE_60747_length_270_cov_265.280851_g52807_i0forward_frame_3 - 0.1 12.7 14.0 0.43 10.7 3.7 2.1 2 0 0 2 2 2 0 Selenoprotein, putative Phe_ZIP PF08916.11 NODE_60747_length_270_cov_265.280851_g52807_i0forward_frame_3 - 0.13 13.0 6.0 3.3 8.5 1.4 2.1 2 0 0 2 2 2 0 Phenylalanine zipper SMI1_KNR4 PF09346.10 NODE_60745_length_270_cov_279.302128_g52805_i0forward_frame_3 - 0.087 13.2 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) PurK_C PF17769.1 NODE_60743_length_270_cov_407.259574_g52803_i0reverse_frame_3 - 0.0082 15.8 0.1 0.012 15.3 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATPase-cat_bd PF12156.8 NODE_60743_length_270_cov_407.259574_g52803_i0reverse_frame_3 - 0.76 10.6 9.4 5.9 7.7 2.5 2.2 1 1 1 2 2 2 0 Putative metal-binding domain of cation transport ATPase ORC4_C PF14629.6 NODE_60743_length_270_cov_407.259574_g52803_i0forward_frame_3 - 0.099 12.0 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus Nrf1_DNA-bind PF10491.9 NODE_60741_length_270_cov_477.548936_g52801_i0reverse_frame_3 - 0.2 11.3 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 TIL PF01826.17 NODE_60741_length_270_cov_477.548936_g52801_i0forward_frame_2 - 0.52 10.6 14.6 1.7 9.0 14.6 2.0 1 1 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain EB PF01683.18 NODE_60741_length_270_cov_477.548936_g52801_i0forward_frame_2 - 1.8 9.0 14.8 44 4.5 14.8 2.2 1 1 0 1 1 1 0 EB module DUF2093 PF09866.9 NODE_60740_length_270_cov_518.838298_g52800_i0reverse_frame_2 - 0.076 12.5 0.2 0.18 11.2 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2093) Mgr1 PF08602.10 NODE_60739_length_270_cov_623.893617_g52799_i0forward_frame_3 - 0.011 14.5 0.4 0.013 14.3 0.4 1.1 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit Avl9 PF09794.9 NODE_60739_length_270_cov_623.893617_g52799_i0forward_frame_3 - 0.44 9.2 4.1 0.48 9.1 4.1 1.0 1 0 0 1 1 1 0 Transport protein Avl9 zf-MIZ PF02891.20 NODE_60738_length_270_cov_1112.617021_g52798_i0forward_frame_3 - 0.051 13.3 2.2 0.25 11.1 0.9 2.0 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger DivIC PF04977.15 ORF99127 - 0.0079 16.0 4.8 0.85 9.4 0.8 2.1 2 0 0 2 2 2 2 Septum formation initiator Chibby PF14645.6 ORF99127 - 0.064 13.7 3.2 0.094 13.1 3.2 1.4 1 1 0 1 1 1 0 Chibby family GIT_SHD PF08518.11 ORF99127 - 0.092 12.4 1.4 0.19 11.4 1.4 1.5 1 0 0 1 1 1 0 Spa2 homology domain (SHD) of GIT DUF2508 PF10704.9 ORF99127 - 0.37 11.0 4.3 0.53 10.5 4.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2508) zf-Tim10_DDP PF02953.15 ORF99053 - 0.0082 15.8 1.6 0.019 14.6 1.7 1.6 1 1 1 2 2 2 1 Tim10/DDP family zinc finger DUF3287 PF11690.8 ORF97761 - 0.035 13.8 0.1 0.05 13.3 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3287) Ribosomal_L2_C PF03947.18 ORF95873 - 6.4e-16 58.7 5.0 8e-16 58.4 5.0 1.1 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain TMEM119 PF15724.5 ORF9580 - 0.06 13.4 1.1 0.074 13.1 1.1 1.1 1 0 0 1 1 1 0 TMEM119 family DUF3265 PF11665.8 ORF94765 - 0.094 12.9 0.4 1.9 8.8 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3265) TLC PF03219.14 ORF94207 - 0.043 12.5 2.0 0.048 12.4 2.0 1.1 1 0 0 1 1 1 0 TLC ATP/ADP transporter COX8 PF02285.15 ORF94207 - 0.11 12.4 0.5 0.34 10.8 0.5 1.9 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII Ribophorin_II PF05817.14 ORF94207 - 1.8 7.0 4.9 2.2 6.7 4.9 1.0 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II SbcCD_C PF13558.6 ORF9336 - 0.0048 17.1 0.0 0.0059 16.8 0.0 1.2 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit ET PF01684.16 ORF92785 - 0.12 12.7 2.9 0.16 12.3 2.9 1.1 1 0 0 1 1 1 0 ET module DUF5585 PF17823.1 ORF89971 - 0.092 11.7 0.4 0.1 11.5 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5585) DUF4954 PF16314.5 ORF89556 - 0.018 13.2 0.1 0.021 13.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) FDX-ACB PF03147.14 ORF89031 - 0.14 12.6 0.3 0.3 11.5 0.1 1.6 2 0 0 2 2 2 0 Ferredoxin-fold anticodon binding domain Chromo_shadow PF01393.19 ORF88775 - 0.011 15.9 0.3 0.019 15.1 0.3 1.4 1 0 0 1 1 1 0 Chromo shadow domain TMEM208_SND2 PF05620.11 ORF88764 - 0.03 14.1 0.3 0.032 14.0 0.3 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 NIF PF03031.18 ORF88759 - 4.4e-21 75.3 0.1 5.1e-21 75.1 0.1 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase VRR_NUC PF08774.11 ORF87977 - 0.19 11.8 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 VRR-NUC domain 5TM-5TMR_LYT PF07694.12 ORF8795 - 0.019 14.4 0.0 0.022 14.3 0.0 1.1 1 0 0 1 1 1 0 5TMR of 5TMR-LYT DM PF00751.18 ORF8739 - 0.47 10.4 8.1 2.5 8.1 0.4 2.5 2 1 0 2 2 2 0 DM DNA binding domain FAM183 PF14886.6 ORF87361 - 8.3e-05 23.3 0.0 9.8e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 FAM183A and FAM183B related Bac_rhamnosid_C PF17390.2 ORF86914 - 0.11 12.3 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase C-terminal domain Lep_receptor_Ig PF06328.11 ORF85685 - 0.087 12.8 0.6 0.41 10.6 0.4 1.8 1 1 1 2 2 2 0 Ig-like C2-type domain PCRF PF03462.18 ORF8555 - 0.057 13.3 1.1 0.06 13.2 1.1 1.1 1 0 0 1 1 1 0 PCRF domain Fringe PF02434.16 ORF8555 - 0.13 11.7 1.0 0.15 11.4 1.0 1.3 1 1 0 1 1 1 0 Fringe-like DUF2070 PF09843.9 ORF85311 - 6.3 5.0 7.7 6.7 4.9 7.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) WRC PF08879.10 ORF83837 - 0.57 9.9 0.0 0.57 9.9 0.0 2.6 3 0 0 3 3 3 0 WRC SET PF00856.28 ORF83238 - 5.6e-15 56.1 0.7 6.7e-15 55.9 0.7 1.1 1 0 0 1 1 1 1 SET domain DUF551 PF04448.12 ORF83160 - 0.00091 20.1 0.1 0.0016 19.3 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF551) Pox_polyA_pol PF03296.13 ORF83063 - 0.039 13.8 1.7 0.34 10.8 0.4 2.0 1 1 1 2 2 2 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain COMM_domain PF07258.14 ORF81747 - 9.6e-09 35.2 0.1 1.2e-08 34.9 0.1 1.2 1 0 0 1 1 1 1 COMM domain ROS_MUCR PF05443.11 ORF81284 - 0.11 12.5 0.7 0.12 12.4 0.7 1.1 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein Chromo_shadow PF01393.19 ORF80527 - 0.011 15.9 0.3 0.019 15.1 0.3 1.4 1 0 0 1 1 1 0 Chromo shadow domain SpoV PF08183.11 ORF80153 - 0.2 11.6 0.1 0.35 10.8 0.1 1.4 1 0 0 1 1 1 0 Stage V sporulation protein family Mating_N PF12731.7 ORF78774 - 0.17 12.0 0.2 7 6.8 0.1 2.1 2 0 0 2 2 2 0 Mating-type protein beta 1 MatP_C PF17414.2 ORF77610 - 6.5e-32 109.5 1.2 1e-31 108.9 1.2 1.3 1 0 0 1 1 1 1 MatP C-terminal ribbon-helix-helix domain MatP PF06303.12 ORF77610 - 7.2e-10 39.3 3.3 1.1e-09 38.7 1.3 2.0 2 0 0 2 2 2 1 MatP N-terminal domain RHH_4 PF13467.6 ORF77610 - 0.00027 20.7 0.2 0.00041 20.2 0.1 1.4 1 1 0 1 1 1 1 Ribbon-helix-helix domain TMF_TATA_bd PF12325.8 ORF77610 - 0.005 17.1 3.9 0.059 13.6 3.9 2.0 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Seryl_tRNA_N PF02403.22 ORF77610 - 0.12 12.6 5.1 0.36 11.1 5.1 1.7 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Oxidored-like PF09791.9 ORF77014 - 1.9 8.2 6.8 3.8 7.3 6.8 1.4 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal OTT_1508_deam PF14441.6 ORF76947 - 0.13 12.3 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase Nrap PF03813.14 ORF76253 - 0.024 14.7 0.1 0.23 11.5 0.0 2.0 1 1 1 2 2 2 0 Nrap protein domain 1 DinI PF06183.13 ORF74154 - 0.097 13.0 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 DinI-like family NICE-3 PF07406.11 ORF73916 - 0.055 13.5 0.1 0.073 13.1 0.1 1.1 1 0 0 1 1 1 0 NICE-3 protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks301.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks301.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks301.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks301.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:18:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cyt_bd_oxida_I PF01654.17 ORF7263 - 0.014 14.0 4.7 0.016 13.9 4.7 1.0 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit I DUF346 PF03984.13 ORF72338 - 0.1 12.4 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Repeat of unknown function (DUF346) Cytochrom_C550 PF14495.6 ORF7170 - 0.2 11.4 0.4 0.26 11.0 0.4 1.2 1 0 0 1 1 1 0 Cytochrome c-550 domain SLC3A2_N PF16028.5 ORF70907 - 8.7 6.0 8.2 2.4 7.8 3.5 2.0 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus AAA_21 PF13304.6 ORF70357 - 0.0022 17.9 0.0 0.0028 17.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF70357 - 0.21 11.0 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Defensin_5 PF18251.1 ORF703 - 0.028 14.5 0.8 0.064 13.3 0.8 1.5 1 0 0 1 1 1 0 Fungal defensin Copsin Shisa PF13908.6 ORF70226 - 0.031 14.5 1.1 0.033 14.4 1.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Peptidase_C74 PF12387.8 ORF68730 - 0.0023 17.5 0.1 0.0025 17.3 0.1 1.0 1 0 0 1 1 1 1 Pestivirus NS2 peptidase Ras PF00071.22 ORF68315 - 2e-10 40.5 0.1 2.5e-10 40.2 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF68315 - 1.2e-07 31.9 0.0 1.6e-07 31.5 0.0 1.3 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 ORF68315 - 0.00072 19.0 0.0 0.00077 18.9 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein Arf PF00025.21 ORF68315 - 0.0015 18.0 0.0 0.0019 17.7 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF68315 - 0.0016 18.5 0.0 0.002 18.2 0.0 1.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 ORF68315 - 0.0059 16.3 0.0 0.96 9.2 0.0 2.1 1 1 1 2 2 2 2 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 ORF68315 - 0.0073 15.8 0.0 0.0082 15.6 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_7 PF12775.7 ORF68315 - 0.011 15.3 0.0 0.013 15.1 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region FeoB_N PF02421.18 ORF68315 - 0.049 13.1 0.0 0.18 11.3 0.0 1.7 1 1 1 2 2 2 0 Ferrous iron transport protein B AAA_22 PF13401.6 ORF68315 - 0.067 13.5 0.0 0.069 13.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF3144 PF11342.8 ORF67951 - 0.15 12.4 0.0 0.19 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3144) Asp2 PF16929.5 ORF67427 - 0.00072 18.7 0.0 0.00078 18.5 0.0 1.0 1 0 0 1 1 1 1 Accessory Sec system GspB-transporter BAAT_C PF08840.11 ORF67427 - 0.071 13.0 0.1 0.076 12.9 0.1 1.1 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Ras PF00071.22 ORF67182 - 2e-10 40.5 0.1 2.5e-10 40.2 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF67182 - 1.2e-07 31.9 0.0 1.6e-07 31.5 0.0 1.3 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 ORF67182 - 0.00072 19.0 0.0 0.00077 18.9 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein Arf PF00025.21 ORF67182 - 0.0015 18.0 0.0 0.0019 17.7 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF67182 - 0.0016 18.5 0.0 0.002 18.2 0.0 1.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 ORF67182 - 0.0059 16.3 0.0 0.96 9.2 0.0 2.1 1 1 1 2 2 2 2 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 ORF67182 - 0.0073 15.8 0.0 0.0082 15.6 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_7 PF12775.7 ORF67182 - 0.011 15.3 0.0 0.013 15.1 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region FeoB_N PF02421.18 ORF67182 - 0.049 13.1 0.0 0.18 11.3 0.0 1.7 1 1 1 2 2 2 0 Ferrous iron transport protein B AAA_22 PF13401.6 ORF67182 - 0.067 13.5 0.0 0.069 13.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain BRE1 PF08647.11 ORF66520 - 3.2e-05 23.9 6.3 3.5e-05 23.8 6.3 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase DUF3450 PF11932.8 ORF66520 - 4.8e-05 22.8 6.0 5.3e-05 22.6 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Spc7 PF08317.11 ORF66520 - 0.00072 18.5 5.9 0.00084 18.3 5.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 ORF66520 - 0.00099 19.6 7.4 0.0012 19.4 7.4 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region Tropomyosin PF00261.20 ORF66520 - 0.0018 17.7 4.8 0.0021 17.5 4.8 1.1 1 0 0 1 1 1 1 Tropomyosin DUF4164 PF13747.6 ORF66520 - 0.0022 18.3 5.1 0.0026 18.0 4.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) Seryl_tRNA_N PF02403.22 ORF66520 - 0.0028 17.8 6.4 0.0035 17.6 6.4 1.1 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain FmiP_Thoc5 PF09766.9 ORF66520 - 0.0038 16.6 1.8 0.0042 16.4 1.8 1.1 1 0 0 1 1 1 1 Fms-interacting protein/Thoc5 YabA PF06156.13 ORF66520 - 0.004 17.8 2.5 0.0047 17.5 2.5 1.1 1 0 0 1 1 1 1 Initiation control protein YabA Muted PF14942.6 ORF66520 - 0.0049 17.2 4.7 0.0056 17.0 4.7 1.0 1 0 0 1 1 1 1 Organelle biogenesis, Muted-like protein TMF_TATA_bd PF12325.8 ORF66520 - 0.0052 17.0 6.3 0.0056 16.9 6.3 1.0 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Atg14 PF10186.9 ORF66520 - 0.0083 15.3 3.0 0.009 15.1 3.0 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3782 PF12644.7 ORF66520 - 0.0096 16.1 1.9 0.016 15.4 1.6 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF3782) FapA PF03961.13 ORF66520 - 0.0098 14.5 4.1 0.011 14.4 4.1 1.0 1 0 0 1 1 1 1 Flagellar Assembly Protein A Tropomyosin_1 PF12718.7 ORF66520 - 0.01 16.0 5.5 0.012 15.8 5.5 1.1 1 0 0 1 1 1 1 Tropomyosin like CEP209_CC5 PF16574.5 ORF66520 - 0.01 16.0 3.6 0.012 15.7 3.6 1.2 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 IFT57 PF10498.9 ORF66520 - 0.011 14.7 4.5 0.012 14.6 4.5 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 JIP_LZII PF16471.5 ORF66520 - 0.011 15.8 4.7 0.011 15.8 4.7 1.8 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II DHR10 PF18595.1 ORF66520 - 0.012 15.7 5.6 0.014 15.5 5.6 1.1 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain HMMR_N PF15905.5 ORF66520 - 0.018 14.5 6.0 0.02 14.4 6.0 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DASH_Dad1 PF08649.10 ORF66520 - 0.02 15.1 0.7 0.02 15.1 0.7 2.5 1 1 2 3 3 3 0 DASH complex subunit Dad1 FemAB PF02388.16 ORF66520 - 0.024 13.5 2.3 0.027 13.3 2.3 1.0 1 0 0 1 1 1 0 FemAB family COG2 PF06148.11 ORF66520 - 0.025 14.6 1.8 0.034 14.2 1.8 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF1664 PF07889.12 ORF66520 - 0.026 14.5 4.2 0.69 10.0 1.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 ORF66520 - 0.033 14.6 1.5 0.044 14.2 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Vta1 PF04652.16 ORF66520 - 0.037 14.0 1.0 0.043 13.8 1.0 1.2 1 0 0 1 1 1 0 Vta1 like SKA2 PF16740.5 ORF66520 - 0.042 13.6 3.4 0.05 13.4 3.4 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 PI3K_P85_iSH2 PF16454.5 ORF66520 - 0.044 13.4 6.9 0.077 12.6 5.9 1.6 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain HemX PF04375.14 ORF66520 - 0.055 12.7 4.3 0.066 12.5 4.3 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Hep_59 PF07052.11 ORF66520 - 0.056 14.2 3.8 0.065 14.0 3.8 1.0 1 0 0 1 1 1 0 Hepatocellular carcinoma-associated antigen 59 Hormone_1 PF00103.20 ORF66520 - 0.056 13.2 1.2 0.063 13.0 1.2 1.1 1 0 0 1 1 1 0 Somatotropin hormone family NPV_P10 PF05531.12 ORF66520 - 0.06 13.8 4.8 0.09 13.3 4.8 1.4 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ABC_tran_CTD PF16326.5 ORF66520 - 0.068 13.4 8.5 0.065 13.5 7.4 1.5 1 1 1 2 2 2 0 ABC transporter C-terminal domain THOC7 PF05615.13 ORF66520 - 0.074 13.3 7.7 0.15 12.4 7.7 1.5 1 1 0 1 1 1 0 Tho complex subunit 7 TMPIT PF07851.13 ORF66520 - 0.084 12.1 3.6 0.096 11.9 3.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein Allexi_40kDa PF05549.11 ORF66520 - 0.091 12.3 1.7 0.1 12.1 1.7 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein CLZ PF16526.5 ORF66520 - 0.1 12.9 5.4 0.42 11.0 3.1 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels CENP-H PF05837.12 ORF66520 - 0.12 12.8 4.8 0.14 12.6 4.8 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Prefoldin PF02996.17 ORF66520 - 0.16 11.9 8.5 0.31 10.9 3.8 2.0 1 1 1 2 2 2 0 Prefoldin subunit DUF724 PF05266.14 ORF66520 - 0.2 11.5 4.8 0.26 11.1 4.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Syntaxin-6_N PF09177.11 ORF66520 - 0.21 12.1 4.3 0.56 10.8 4.4 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF1515 PF07439.11 ORF66520 - 0.23 11.5 1.4 0.28 11.2 1.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) HAUS6_N PF14661.6 ORF66520 - 0.25 10.9 3.2 0.29 10.7 3.2 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus BST2 PF16716.5 ORF66520 - 0.27 11.8 6.1 1.1 9.9 5.8 1.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Spc24 PF08286.11 ORF66520 - 0.32 11.3 7.6 0.76 10.0 7.6 1.6 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 XhlA PF10779.9 ORF66520 - 1.1 9.5 6.3 2.1 8.6 6.2 1.6 1 1 0 1 1 1 0 Haemolysin XhlA DivIC PF04977.15 ORF66520 - 1.9 8.3 7.4 3.9 7.3 7.4 1.7 1 1 0 1 1 1 0 Septum formation initiator DUF4199 PF13858.6 ORF66520 - 3.7 7.9 5.8 5.5 7.4 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) FANCI_HD1 PF14679.6 ORF64537 - 0.025 14.6 0.0 0.032 14.2 0.0 1.2 1 0 0 1 1 1 0 FANCI helical domain 1 DUF4497 PF14924.6 ORF64390 - 0.1 13.1 0.0 0.17 12.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4497) zf-CCCH_6 PF18585.1 ORF64264 - 1.5 8.7 6.1 18 5.3 0.0 2.3 2 0 0 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 ComFB PF10719.9 ORF64089 - 0.081 13.0 0.3 0.18 11.9 0.1 1.7 1 1 1 2 2 2 0 Late competence development protein ComFB vMSA PF00695.19 ORF6400 - 0.13 11.4 0.9 0.13 11.3 0.9 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus TMEM208_SND2 PF05620.11 ORF63066 - 0.03 14.1 0.3 0.032 14.0 0.3 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 TMEM208_SND2 PF05620.11 ORF62495 - 0.03 14.1 0.3 0.032 14.0 0.3 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 TMEMspv1-c74-12 PF11044.8 ORF61832 - 9.3 6.3 13.7 11 6.1 13.1 1.5 1 1 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein RecR PF02132.15 ORF6006 - 0.081 12.5 1.4 0.1 12.2 0.7 1.6 2 0 0 2 2 2 0 RecR protein DUF555 PF04475.12 ORF57974 - 0.006 16.9 0.0 0.0074 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF555) Erf4 PF10256.9 ORF57932 - 0.028 14.5 0.0 0.031 14.4 0.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 7/ERF4 family Cyclophil_like2 PF18050.1 ORF57317 - 0.013 15.5 0.2 0.016 15.2 0.2 1.1 1 0 0 1 1 1 0 Cyclophilin-like family Hol_Tox PF16935.5 ORF56913 - 0.062 13.3 0.0 0.095 12.8 0.0 1.3 1 0 0 1 1 1 0 Putative Holin-like Toxin (Hol-Tox) KH_7 PF17214.3 ORF55834 - 0.025 14.5 0.1 0.031 14.2 0.1 1.2 1 0 0 1 1 1 0 KH domain DNA_pol_A_exo1 PF01612.20 ORF53876 - 0.00025 20.8 0.0 0.00034 20.4 0.0 1.2 1 0 0 1 1 1 1 3'-5' exonuclease FAM70 PF14967.6 ORF53876 - 0.083 12.3 0.0 0.087 12.3 0.0 1.0 1 0 0 1 1 1 0 FAM70 protein TPR_12 PF13424.6 ORF53815 - 7.1e-08 32.6 1.3 8.7e-08 32.4 0.1 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF53815 - 2.6e-05 23.9 0.1 2.6e-05 23.9 0.1 2.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF53815 - 3.4e-05 23.6 0.5 0.00021 21.2 0.1 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF53815 - 0.00045 20.7 0.4 0.039 14.6 0.1 2.6 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF53815 - 0.0026 17.7 1.0 0.0091 16.0 0.2 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF53815 - 0.0053 16.9 0.1 0.0053 16.9 0.1 2.2 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF53815 - 0.0075 16.5 0.1 0.0092 16.2 0.1 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 ORF53815 - 0.016 15.1 1.8 0.044 13.7 0.0 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF53815 - 0.033 14.8 0.2 0.13 12.9 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF333 PF03891.15 ORF53815 - 0.052 13.8 0.0 0.077 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF333) eIF-3c_N PF05470.12 ORF53815 - 0.14 10.5 0.0 0.14 10.5 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus DUF2407 PF10302.9 ORF53809 - 0.017 15.6 0.2 0.021 15.4 0.2 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain BDV_P10 PF06515.11 ORF53759 - 0.023 14.7 1.1 0.027 14.5 1.1 1.2 1 0 0 1 1 1 0 Borna disease virus P10 protein Chlam_OMP3 PF03503.13 ORF53648 - 0.077 13.3 1.2 0.12 12.7 1.2 1.4 1 0 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 3 AAA_21 PF13304.6 ORF53623 - 0.0013 18.6 0.0 0.0022 17.9 0.0 1.4 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 ORF53623 - 0.035 12.8 0.0 0.036 12.7 0.0 1.0 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 ORF53623 - 0.063 13.5 0.2 1.2 9.5 0.1 2.1 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF53623 - 0.11 11.9 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Mt_ATP-synt_B PF05405.14 ORF53019 - 0.03 14.0 0.2 0.038 13.6 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) YqeY PF09424.10 ORF51776 - 0.023 14.8 0.3 0.029 14.4 0.3 1.1 1 0 0 1 1 1 0 Yqey-like protein ThrE_2 PF12821.7 ORF51685 - 0.79 9.9 6.9 1.6 8.9 6.9 1.5 1 1 0 1 1 1 0 Threonine/Serine exporter, ThrE Tex_N PF09371.10 ORF51647 - 0.055 13.1 3.6 0.07 12.8 3.6 1.1 1 0 0 1 1 1 0 Tex-like protein N-terminal domain Ribosomal_L30 PF00327.20 ORF5148 - 0.029 14.3 0.2 0.68 9.9 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein L30p/L7e Oxysterol_BP PF01237.18 ORF50459 - 9.7e-08 31.2 0.5 9.9e-08 31.2 0.5 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Omega_Repress PF07764.11 ORF50459 - 0.032 14.8 0.0 0.044 14.3 0.0 1.2 1 0 0 1 1 1 0 Omega Transcriptional Repressor DUF986 PF06173.12 ORF50274 - 0.01 15.9 3.5 0.011 15.8 3.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF986) EndIII_4Fe-2S PF10576.9 ORF49869 - 0.054 13.9 7.1 2 8.8 0.5 2.8 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III DUF3254 PF11630.8 ORF49361 - 0.11 12.6 0.2 0.2 11.9 0.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3254) Swm2 PF17083.5 ORF49268 - 0.29 11.1 2.1 0.38 10.8 2.1 1.1 1 0 0 1 1 1 0 Nucleolar protein Swm2 EndIII_4Fe-2S PF10576.9 ORF47852 - 0.054 13.9 7.1 2 8.8 0.5 2.8 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III FGFR3_TM PF18123.1 ORF47542 - 0.6 9.7 3.5 0.9 9.1 3.5 1.3 1 0 0 1 1 1 0 Fibroblast growth factor receptor 3 transmembrane domain HTH_AraC PF00165.23 ORF47186 - 0.15 12.2 0.7 0.35 11.0 0.2 1.8 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family ROS_MUCR PF05443.11 ORF46666 - 0.11 12.5 0.7 0.12 12.4 0.7 1.1 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein Tim29 PF10171.9 ORF46581 - 0.059 12.9 0.0 0.11 12.0 0.0 1.4 1 1 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 bZIP_2 PF07716.15 ORF4632 - 0.0084 16.2 0.7 0.58 10.3 0.1 2.2 1 1 1 2 2 2 2 Basic region leucine zipper Pneumovirus_M2 PF06436.11 ORF4632 - 0.018 14.5 5.2 0.021 14.3 5.2 1.1 1 0 0 1 1 1 0 Pneumovirus matrix protein 2 (M2) DUF5082 PF16888.5 ORF4632 - 0.025 14.9 3.9 0.041 14.2 1.5 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) DivIC PF04977.15 ORF4632 - 0.026 14.3 0.9 0.055 13.2 0.4 1.7 1 1 1 2 2 2 0 Septum formation initiator PAN_2 PF08276.11 ORF46269 - 0.015 15.4 0.7 0.018 15.1 0.7 1.2 1 0 0 1 1 1 0 PAN-like domain SAT PF16073.5 ORF45576 - 0.17 11.6 0.0 0.2 11.4 0.0 1.0 1 0 0 1 1 1 0 Starter unit:ACP transacylase in aflatoxin biosynthesis GPR15L PF15854.5 ORF45209 - 0.039 14.2 0.5 0.049 13.9 0.5 1.1 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 YdjO PF14169.6 ORF43188 - 0.086 12.6 0.2 0.14 11.9 0.2 1.3 1 0 0 1 1 1 0 Cold-inducible protein YdjO PCRF PF03462.18 ORF42265 - 0.057 13.3 1.1 0.06 13.2 1.1 1.1 1 0 0 1 1 1 0 PCRF domain Fringe PF02434.16 ORF42265 - 0.13 11.7 1.0 0.15 11.4 1.0 1.3 1 1 0 1 1 1 0 Fringe-like RCR PF12273.8 ORF4208 - 0.007 17.0 0.1 0.0078 16.9 0.1 1.0 1 0 0 1 1 1 1 Chitin synthesis regulation, resistance to Congo red Ribosomal_S15 PF00312.22 ORF4066 - 2.6e-38 130.1 1.5 2.9e-38 129.9 1.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S15 FliJ PF02050.16 ORF4066 - 0.027 14.7 0.3 0.031 14.5 0.3 1.0 1 0 0 1 1 1 0 Flagellar FliJ protein Stirrup PF09061.6 ORF4066 - 0.1 12.8 0.3 0.13 12.4 0.3 1.2 1 1 0 1 1 1 0 Stirrup RNA_pol_Rpc82 PF05645.13 ORF40614 - 0.024 14.4 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 DrrA_P4M PF14860.6 ORF40614 - 0.063 13.1 0.2 0.076 12.9 0.2 1.2 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain MORN PF02493.20 ORF40523 - 6.8e-16 57.1 16.2 5.6e-07 29.1 1.6 4.0 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 ORF40523 - 0.018 14.7 0.3 6.5 6.5 0.1 2.4 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain SPRY PF00622.28 ORF40523 - 0.078 13.1 0.2 0.09 12.9 0.2 1.1 1 0 0 1 1 1 0 SPRY domain zf-RING_2 PF13639.6 ORF40462 - 2.8e-12 46.8 10.5 4.1e-12 46.2 10.5 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF40462 - 3.8e-08 33.2 8.9 5.8e-08 32.6 8.9 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF40462 - 1.3e-07 31.6 6.9 1.6e-07 31.2 4.8 2.0 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF40462 - 1.9e-07 30.7 4.4 3.7e-07 29.8 4.4 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF40462 - 2.7e-07 30.3 9.0 3.5e-07 30.0 9.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF40462 - 6.3e-07 29.1 10.2 1.1e-06 28.4 10.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF40462 - 9.6e-07 29.0 11.0 2.9e-06 27.5 11.0 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain Prok-RING_4 PF14447.6 ORF40462 - 4.1e-06 26.6 6.8 6.2e-06 26.0 6.8 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF40462 - 6.1e-06 26.0 10.4 1.1e-05 25.1 10.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF40462 - 0.0008 19.5 7.0 0.0036 17.4 7.3 1.9 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING U-box PF04564.15 ORF40462 - 0.002 18.2 0.1 0.0036 17.4 0.0 1.5 2 0 0 2 2 2 1 U-box domain zf-ANAPC11 PF12861.7 ORF40462 - 0.0039 17.2 6.0 0.007 16.4 6.0 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Rtf2 PF04641.12 ORF40462 - 0.0039 16.6 0.8 0.0043 16.5 0.8 1.3 1 0 0 1 1 1 1 Rtf2 RING-finger Zn_ribbon_17 PF17120.5 ORF40462 - 0.0075 15.9 8.0 0.011 15.3 8.0 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF40462 - 0.0099 16.0 5.9 0.022 14.9 5.9 1.6 1 1 0 1 1 1 1 RING-variant domain zf-RING-like PF08746.11 ORF40462 - 0.026 14.8 9.5 0.052 13.9 9.5 1.5 1 0 0 1 1 1 0 RING-like domain FANCL_C PF11793.8 ORF40462 - 0.038 14.2 9.3 0.85 9.8 9.3 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain ALG3 PF05208.13 ORF40462 - 0.096 12.1 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 ALG3 protein Prok-RING_1 PF14446.6 ORF40462 - 0.1 12.5 12.0 0.68 9.9 6.6 2.3 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 UPF0547 PF10571.9 ORF40462 - 0.25 11.5 0.8 0.25 11.5 0.8 2.4 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-RING_4 PF14570.6 ORF40462 - 0.81 9.5 15.2 19 5.2 15.0 2.2 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-HIT PF04438.16 ORF40462 - 1 9.3 15.6 1.1 9.2 1.0 3.2 2 1 1 3 3 3 0 HIT zinc finger Zf_RING PF16744.5 ORF40462 - 1.2 9.3 6.4 1.8 8.7 6.4 1.4 1 0 0 1 1 1 0 KIAA1045 RING finger zf-C3H2C3 PF17122.5 ORF40462 - 1.7 8.7 11.0 5.3 7.2 11.0 1.9 1 1 0 1 1 1 0 Zinc-finger AAA_27 PF13514.6 ORF40238 - 0.11 12.1 0.0 0.12 11.9 0.0 1.0 1 0 0 1 1 1 0 AAA domain ubiquitin PF00240.23 ORF40051 - 1e-15 57.2 0.0 1.1e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF40051 - 2e-09 37.1 0.0 2.4e-09 36.9 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF40051 - 2.4e-05 24.7 0.0 0.00017 22.0 0.0 1.9 1 1 0 1 1 1 1 Ubiquitin-like domain DUF3422 PF11902.8 ORF40051 - 0.18 10.9 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3422) HECA PF15353.6 ORF3985 - 0.084 13.1 1.7 0.17 12.1 1.5 1.6 1 1 0 1 1 1 0 Headcase protein family homologue Tetraspanin PF00335.20 ORF39058 - 0.53 10.0 1.9 0.55 9.9 1.9 1.0 1 0 0 1 1 1 0 Tetraspanin family Ac81 PF05820.11 ORF39046 - 0.12 12.0 7.1 0.13 11.8 7.1 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 CBFB_NFYA PF02045.15 ORF38911 - 0.022 15.4 1.1 0.033 14.8 1.1 1.2 1 0 0 1 1 1 0 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B TnpB_IS66 PF05717.13 ORF38911 - 0.073 13.0 0.1 0.27 11.2 0.0 1.8 1 1 1 2 2 2 0 IS66 Orf2 like protein Myticin-prepro PF10690.9 ORF38911 - 7.5 6.9 14.8 6.4 7.1 13.8 1.5 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel BCLP PF12304.8 ORF38767 - 0.11 12.0 0.1 0.12 11.9 0.1 1.0 1 0 0 1 1 1 0 Beta-casein like protein CMD PF02627.20 ORF38668 - 0.14 12.2 0.0 0.74 9.9 0.0 1.9 1 1 1 2 2 2 0 Carboxymuconolactone decarboxylase family Adeno_PV PF03910.13 ORF3786 - 2 7.1 7.3 2.2 6.9 7.3 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV Ribosomal_L30 PF00327.20 ORF37117 - 0.029 14.3 0.2 0.68 9.9 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein L30p/L7e FAM183 PF14886.6 ORF36958 - 8.3e-05 23.3 0.0 9.8e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 FAM183A and FAM183B related KdgT PF03812.13 ORF34855 - 0.054 12.8 0.2 0.065 12.6 0.2 1.0 1 0 0 1 1 1 0 2-keto-3-deoxygluconate permease bHLH-MYC_N PF14215.6 ORF34696 - 0.029 14.7 1.7 0.03 14.6 1.7 1.1 1 0 0 1 1 1 0 bHLH-MYC and R2R3-MYB transcription factors N-terminal AnfG_VnfG PF03139.15 ORF34696 - 0.34 11.0 7.3 0.42 10.7 7.3 1.1 1 0 0 1 1 1 0 Vanadium/alternative nitrogenase delta subunit DM PF00751.18 ORF33738 - 0.47 10.4 8.1 2.5 8.1 0.4 2.5 2 1 0 2 2 2 0 DM DNA binding domain Pacifastin_I PF05375.13 ORF32646 - 0.075 12.8 3.2 0.075 12.8 3.2 1.8 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) SLC3A2_N PF16028.5 ORF32203 - 0.0052 16.3 0.0 0.008 15.7 0.0 1.3 1 0 0 1 1 1 1 Solute carrier family 3 member 2 N-terminus Apt1 PF10351.9 ORF31213 - 0.05 12.5 0.1 0.052 12.4 0.1 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF627 PF04781.12 ORF31213 - 0.081 12.9 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF627) zf-RING_2 PF13639.6 ORF30934 - 2.8e-12 46.8 10.5 4.1e-12 46.2 10.5 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF30934 - 3.8e-08 33.2 8.9 5.8e-08 32.6 8.9 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF30934 - 1.3e-07 31.6 6.9 1.6e-07 31.2 4.8 2.0 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF30934 - 1.9e-07 30.7 4.4 3.7e-07 29.8 4.4 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF30934 - 2.7e-07 30.3 9.0 3.5e-07 30.0 9.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF30934 - 6.3e-07 29.1 10.2 1.1e-06 28.4 10.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF30934 - 9.6e-07 29.0 11.0 2.9e-06 27.5 11.0 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain Prok-RING_4 PF14447.6 ORF30934 - 4.1e-06 26.6 6.8 6.2e-06 26.0 6.8 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF30934 - 6.1e-06 26.0 10.4 1.1e-05 25.1 10.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF30934 - 0.0008 19.5 7.0 0.0036 17.4 7.3 1.9 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING U-box PF04564.15 ORF30934 - 0.002 18.2 0.1 0.0036 17.4 0.0 1.5 2 0 0 2 2 2 1 U-box domain zf-ANAPC11 PF12861.7 ORF30934 - 0.0039 17.2 6.0 0.007 16.4 6.0 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Rtf2 PF04641.12 ORF30934 - 0.0039 16.6 0.8 0.0043 16.5 0.8 1.3 1 0 0 1 1 1 1 Rtf2 RING-finger Zn_ribbon_17 PF17120.5 ORF30934 - 0.0075 15.9 8.0 0.011 15.3 8.0 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF30934 - 0.0099 16.0 5.9 0.022 14.9 5.9 1.6 1 1 0 1 1 1 1 RING-variant domain zf-RING-like PF08746.11 ORF30934 - 0.026 14.8 9.5 0.052 13.9 9.5 1.5 1 0 0 1 1 1 0 RING-like domain FANCL_C PF11793.8 ORF30934 - 0.038 14.2 9.3 0.85 9.8 9.3 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain ALG3 PF05208.13 ORF30934 - 0.096 12.1 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 ALG3 protein Prok-RING_1 PF14446.6 ORF30934 - 0.1 12.5 12.0 0.68 9.9 6.6 2.3 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 UPF0547 PF10571.9 ORF30934 - 0.25 11.5 0.8 0.25 11.5 0.8 2.4 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-RING_4 PF14570.6 ORF30934 - 0.81 9.5 15.2 19 5.2 15.0 2.2 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-HIT PF04438.16 ORF30934 - 1 9.3 15.6 1.1 9.2 1.0 3.2 2 1 1 3 3 3 0 HIT zinc finger Zf_RING PF16744.5 ORF30934 - 1.2 9.3 6.4 1.8 8.7 6.4 1.4 1 0 0 1 1 1 0 KIAA1045 RING finger zf-C3H2C3 PF17122.5 ORF30934 - 1.7 8.7 11.0 5.3 7.2 11.0 1.9 1 1 0 1 1 1 0 Zinc-finger Oxysterol_BP PF01237.18 ORF30440 - 9.7e-08 31.2 0.5 9.9e-08 31.2 0.5 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein Omega_Repress PF07764.11 ORF30440 - 0.032 14.8 0.0 0.044 14.3 0.0 1.2 1 0 0 1 1 1 0 Omega Transcriptional Repressor Subtilosin_A PF11420.8 ORF29674 - 0.18 11.8 2.9 0.32 11.0 2.9 1.3 1 0 0 1 1 1 0 Bacteriocin subtilosin A dsRBD2 PF17842.1 ORF28543 - 0.15 12.2 0.2 0.16 12.2 0.2 1.1 1 0 0 1 1 1 0 Double-stranded RNA binding domain 2 PHD PF00628.29 ORF28053 - 0.011 15.6 2.8 0.011 15.6 2.8 1.8 1 1 1 2 2 2 0 PHD-finger zf-B_box PF00643.24 ORF28053 - 0.23 11.7 6.8 0.34 11.1 6.8 1.3 1 0 0 1 1 1 0 B-box zinc finger Involucrin_N PF10583.9 ORF27048 - 0.0053 17.3 5.3 0.0079 16.8 4.5 1.6 1 1 0 1 1 1 1 Involucrin of squamous epithelia N-terminus PUB_1 PF18486.1 ORF27048 - 0.049 13.5 0.1 0.066 13.1 0.1 1.3 1 0 0 1 1 1 0 PNGase/UBA- or UBX-containing domain PPR_1 PF12854.7 ORF26321 - 2.1 8.1 4.3 1.1 9.0 0.6 2.2 2 0 0 2 2 2 0 PPR repeat Cyclophil_like2 PF18050.1 ORF26308 - 0.013 15.5 0.2 0.016 15.2 0.2 1.1 1 0 0 1 1 1 0 Cyclophilin-like family GlpM PF06942.12 ORF25703 - 0.15 12.5 3.5 0.17 12.3 2.7 1.5 1 1 1 2 2 2 0 GlpM protein LETM1 PF07766.13 ORF25703 - 0.56 9.5 4.9 0.7 9.2 4.9 1.1 1 0 0 1 1 1 0 LETM1-like protein OpuAC PF04069.12 ORF25297 - 1.9e-18 67.0 0.1 2e-18 66.9 0.1 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Kv2channel PF03521.14 ORF24995 - 0.0001 21.8 1.2 0.0001 21.8 1.2 1.1 1 0 0 1 1 1 1 Kv2 voltage-gated K+ channel MMgT PF10270.9 ORF24311 - 0.022 15.1 0.1 0.025 14.9 0.1 1.3 1 0 0 1 1 1 0 Membrane magnesium transporter zf-H2C2_2 PF13465.6 ORF24087 - 0.14 12.6 1.3 1.2 9.7 0.1 2.8 2 0 0 2 2 2 0 Zinc-finger double domain TMEM119 PF15724.5 ORF23944 - 0.06 13.4 1.1 0.074 13.1 1.1 1.1 1 0 0 1 1 1 0 TMEM119 family Adeno_VII PF03228.14 ORF23667 - 0.053 14.2 0.0 0.053 14.2 0.0 1.1 1 0 0 1 1 1 0 Adenoviral core protein VII CMD PF02627.20 ORF23544 - 0.14 12.2 0.0 0.74 9.9 0.0 1.9 1 1 1 2 2 2 0 Carboxymuconolactone decarboxylase family G-gamma PF00631.22 ORF23111 - 0.033 14.2 0.3 0.18 11.8 0.2 2.0 2 0 0 2 2 2 0 GGL domain Lipoprotein_20 PF13942.6 ORF23111 - 0.034 14.1 1.0 0.039 13.9 1.0 1.1 1 0 0 1 1 1 0 YfhG lipoprotein Dynein_light PF01221.18 ORF23007 - 3.2e-42 142.7 2.0 3.5e-42 142.6 2.0 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 SGTA_dimer PF16546.5 ORF23007 - 0.022 14.5 1.1 0.031 14.1 1.1 1.2 1 0 0 1 1 1 0 Homodimerisation domain of SGTA Imm48 PF15574.6 ORF23007 - 0.035 13.9 0.1 0.046 13.5 0.1 1.2 1 0 0 1 1 1 0 Immunity protein 48 NADH_4Fe-4S PF10589.9 ORF22935 - 0.12 12.5 0.1 0.65 10.1 0.1 1.9 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ras PF00071.22 ORF22720 - 2e-10 40.5 0.1 2.5e-10 40.2 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF22720 - 1.2e-07 31.9 0.0 1.6e-07 31.5 0.0 1.3 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 ORF22720 - 0.00072 19.0 0.0 0.00077 18.9 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein Arf PF00025.21 ORF22720 - 0.0015 18.0 0.0 0.0019 17.7 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF22720 - 0.0016 18.5 0.0 0.002 18.2 0.0 1.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 ORF22720 - 0.0059 16.3 0.0 0.96 9.2 0.0 2.1 1 1 1 2 2 2 2 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 ORF22720 - 0.0073 15.8 0.0 0.0082 15.6 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_7 PF12775.7 ORF22720 - 0.011 15.3 0.0 0.013 15.1 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region FeoB_N PF02421.18 ORF22720 - 0.049 13.1 0.0 0.18 11.3 0.0 1.7 1 1 1 2 2 2 0 Ferrous iron transport protein B AAA_22 PF13401.6 ORF22720 - 0.067 13.5 0.0 0.069 13.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF3611 PF12263.8 ORF2200 - 0.062 13.2 0.0 0.073 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) protein_MS5 PF04776.12 ORF21205 - 0.0062 16.6 0.8 0.0065 16.6 0.8 1.1 1 0 0 1 1 1 1 Protein MS5 DUF2284 PF10050.9 ORF21205 - 0.07 12.9 0.2 0.075 12.8 0.2 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Peptidase_M50 PF02163.22 ORF20840 - 3.5e-21 75.6 0.4 4e-21 75.4 0.4 1.0 1 0 0 1 1 1 1 Peptidase family M50 Endonuclease_7 PF02945.15 ORF20546 - 0.85 9.6 4.7 3.1 7.8 1.9 2.1 1 1 1 2 2 2 0 Recombination endonuclease VII Pox_A21 PF05323.12 ORF20304 - 0.23 12.1 5.5 0.32 11.6 5.5 1.3 1 0 0 1 1 1 0 Poxvirus A21 Protein HpuA PF16960.5 ORF20040 - 0.0016 17.7 1.9 0.0019 17.4 1.9 1.0 1 0 0 1 1 1 1 Haemoglobin-haptoglobin utilisation, porphyrin transporter ANAPC3 PF12895.7 ORF19888 - 6.9e-06 26.2 0.1 8.9e-06 25.8 0.1 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 DUF1039 PF06287.11 ORF19888 - 0.00027 21.3 0.0 0.00099 19.5 0.0 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF1039) TPR_8 PF13181.6 ORF19888 - 0.0084 16.2 1.1 0.37 11.1 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF19888 - 0.024 15.2 0.1 0.037 14.5 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat SRP_TPR_like PF17004.5 ORF19888 - 0.061 13.3 0.3 0.07 13.2 0.3 1.2 1 0 0 1 1 1 0 Putative TPR-like repeat DUF2845 PF11006.8 ORF19888 - 0.086 13.0 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2845) EMC3_TMCO1 PF01956.16 ORF19888 - 0.089 12.5 0.1 0.093 12.5 0.1 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like GP40 PF11025.8 ORF19888 - 0.12 12.1 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Glycoprotein GP40 of Cryptosporidium DUF4301 PF14134.6 ORF19365 - 0.022 13.6 0.0 0.023 13.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) Acylphosphatase PF00708.18 ORF18090 - 0.21 12.0 0.3 0.21 12.0 0.3 2.1 2 1 1 3 3 3 0 Acylphosphatase DUF1336 PF07059.12 ORF17941 - 3.6e-06 27.2 0.0 4.9e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1336) Myb_DNA-bind_6 PF13921.6 ORF17528 - 0.12 12.7 1.0 0.19 12.0 1.0 1.3 1 0 0 1 1 1 0 Myb-like DNA-binding domain DUF2613 PF11021.8 ORF16966 - 0.081 13.1 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) DUF5466 PF17554.2 ORF16704 - 0.094 12.9 1.1 0.15 12.3 1.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5466) PGAP1 PF07819.13 ORF16487 - 0.0021 17.8 0.0 0.0026 17.5 0.0 1.2 1 1 0 1 1 1 1 PGAP1-like protein TrbH PF07283.11 ORF16487 - 0.078 13.2 0.0 0.098 12.8 0.0 1.1 1 0 0 1 1 1 0 Conjugal transfer protein TrbH EamA PF00892.20 ORF16236 - 1.3e-10 41.6 8.8 1.4e-10 41.5 8.8 1.0 1 0 0 1 1 1 1 EamA-like transporter family Pox_polyA_pol PF03296.13 ORF16031 - 0.039 13.8 1.7 0.34 10.8 0.4 2.0 1 1 1 2 2 2 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain TctA PF01970.16 ORF15901 - 0.59 8.8 5.7 0.67 8.6 5.7 1.0 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family DUF3357 PF11837.8 ORF15680 - 0.13 12.7 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) PPR_1 PF12854.7 ORF152298 - 2.1 8.1 4.3 1.1 9.0 0.6 2.2 2 0 0 2 2 2 0 PPR repeat DUF5421 PF17458.2 ORF151928 - 0.22 10.9 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5421) DUF1077 PF06417.12 ORF151638 - 0.073 13.1 0.8 0.093 12.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) COMM_domain PF07258.14 ORF151522 - 9.6e-09 35.2 0.1 1.2e-08 34.9 0.1 1.2 1 0 0 1 1 1 1 COMM domain DUF5578 PF17741.1 ORF151268 - 0.03 13.8 0.0 0.034 13.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5578) zf-nanos PF05741.13 ORF148055 - 0.019 15.2 6.9 0.29 11.4 6.9 2.2 1 1 0 1 1 1 0 Nanos RNA binding domain DUF874 PF05917.11 ORF147775 - 7.8 5.4 15.7 8.1 5.4 15.7 1.0 1 0 0 1 1 1 0 Helicobacter pylori protein of unknown function (DUF874) Hanta_G2 PF01561.16 ORF147499 - 0.0026 16.5 1.6 0.0026 16.5 1.6 1.1 1 0 0 1 1 1 1 Hantavirus glycoprotein G2 KCNQ2_u3 PF16642.5 ORF146664 - 0.052 14.5 0.1 0.059 14.4 0.1 1.1 1 0 0 1 1 1 0 Unstructured region on Potassium channel subunit alpha KvLQT2 zf-C2H2_10 PF16588.5 ORF146508 - 0.098 12.4 0.1 0.19 11.5 0.1 1.5 1 0 0 1 1 1 0 C2H2 zinc-finger ROS_MUCR PF05443.11 ORF146194 - 0.11 12.5 0.7 0.12 12.4 0.7 1.1 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein Tmemb_18A PF09771.9 ORF145653 - 0.03 14.7 0.8 0.04 14.3 0.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 188 Flavi_NS4A PF01350.17 ORF145653 - 0.21 11.5 2.1 0.25 11.3 2.1 1.1 1 0 0 1 1 1 0 Flavivirus non-structural protein NS4A DUF267 PF03268.14 ORF14529 - 0.27 10.1 0.2 0.33 9.8 0.2 1.1 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF267 DUF4543 PF15076.6 ORF14516 - 0.055 13.6 2.2 0.076 13.2 1.6 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4543) ADD_ATRX PF17981.1 ORF14516 - 0.18 11.7 1.7 0.43 10.5 0.1 2.3 1 1 2 3 3 3 0 Cysteine Rich ADD domain Polysacc_syn_2C PF08485.10 ORF144840 - 0.028 14.1 0.9 1.6 8.5 0.0 2.3 1 1 1 2 2 2 0 Polysaccharide biosynthesis protein C-terminal DUF1611 PF07755.11 ORF144840 - 0.05 12.9 0.0 0.058 12.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain FLYWCH_N PF15423.6 ORF144087 - 0.013 15.6 0.2 0.015 15.4 0.2 1.1 1 0 0 1 1 1 0 FLYWCH-type zinc finger-containing protein DUF2181 PF10223.9 ORF14388 - 0.2 11.1 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2181) Herpes_US9 PF06072.11 ORF143779 - 0.32 10.9 0.7 0.47 10.4 0.7 1.2 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 zf-RING_2 PF13639.6 ORF143273 - 6.7e-10 39.1 10.6 8.7e-10 38.8 10.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF143273 - 4.8e-06 26.8 11.5 5.9e-05 23.3 11.5 2.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF143273 - 2.4e-05 24.2 8.1 3.2e-05 23.8 8.1 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF143273 - 0.0001 22.1 7.1 0.00018 21.3 7.1 1.4 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF143273 - 0.00032 20.5 6.5 0.0005 19.9 6.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF143273 - 0.0014 18.7 6.1 0.0025 17.9 6.1 1.5 1 1 0 1 1 1 1 RING-variant domain zf-RING_11 PF17123.5 ORF143273 - 0.0046 16.7 8.3 0.0046 16.7 8.3 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF143273 - 0.0052 16.8 4.9 0.0052 16.8 4.9 2.1 2 0 0 2 2 2 1 RING-type zinc-finger zf-P11 PF03854.14 ORF143273 - 0.006 16.2 6.9 0.019 14.6 3.3 2.2 2 0 0 2 2 2 1 P-11 zinc finger zf-C3HC4_2 PF13923.6 ORF143273 - 0.006 16.4 11.9 0.029 14.2 11.9 2.0 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF143273 - 0.01 15.7 11.5 0.41 10.5 11.9 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 Baculo_RING PF05883.11 ORF143273 - 0.013 15.5 0.5 0.017 15.1 0.5 1.3 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain FANCL_C PF11793.8 ORF143273 - 0.021 15.0 8.5 0.19 12.0 8.5 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain zf-ANAPC11 PF12861.7 ORF143273 - 0.05 13.6 6.7 0.087 12.9 6.7 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF143273 - 0.052 13.2 9.3 0.11 12.1 9.3 1.7 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF143273 - 1.6 9.0 9.4 3.1e+02 1.6 9.3 2.5 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Chromo_shadow PF01393.19 ORF143071 - 0.011 15.9 0.3 0.019 15.1 0.3 1.4 1 0 0 1 1 1 0 Chromo shadow domain Inhibitor_I78 PF11720.8 ORF142627 - 0.2 11.7 0.9 0.28 11.3 0.8 1.4 1 1 0 1 1 1 0 Peptidase inhibitor I78 family EF-hand_1 PF00036.32 ORF141501 - 2.6e-13 48.5 1.9 3.8e-07 29.2 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF141501 - 6e-13 49.0 0.2 7.4e-13 48.8 0.2 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF141501 - 4.2e-12 45.0 0.6 9.7e-08 31.4 0.0 2.4 2 1 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF141501 - 1.9e-09 37.2 0.5 1e-05 25.3 0.1 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF141501 - 1.2e-05 24.6 1.7 0.00035 19.9 0.0 2.8 2 1 0 2 2 2 1 EF hand EF-hand_9 PF14658.6 ORF141501 - 0.0001 22.5 0.0 0.00014 22.1 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain Qua1 PF16274.5 ORF141501 - 0.51 10.2 3.8 1.4 8.8 0.4 2.4 2 1 0 2 2 2 0 Qua1 domain DM PF00751.18 ORF140962 - 0.47 10.4 8.1 2.5 8.1 0.4 2.5 2 1 0 2 2 2 0 DM DNA binding domain DUF555 PF04475.12 ORF140350 - 0.006 16.9 0.0 0.0074 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF555) Mltc_N PF11873.8 ORF138789 - 0.11 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Membrane-bound lytic murein transglycosylase C, N-terminal domain NADH_4Fe-4S PF10589.9 ORF137535 - 0.12 12.5 0.1 0.65 10.1 0.1 1.9 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region zf_Rg PF17915.1 ORF137445 - 0.0056 16.0 0.4 0.0092 15.4 0.4 1.3 1 0 0 1 1 1 1 Reverse gyrase zinc finger Defensin_2 PF01097.18 ORF137233 - 0.0048 16.8 0.2 0.0087 16.0 0.2 1.4 1 0 0 1 1 1 1 Arthropod defensin Kinin PF08260.11 ORF136759 - 0.14 12.7 2.5 0.39 11.3 2.5 1.8 1 0 0 1 1 1 0 Insect kinin peptide DUF1449 PF07290.11 ORF136528 - 0.2 11.2 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1449) DUF1010 PF06231.11 ORF136430 - 0.085 13.4 1.6 0.12 12.9 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) GLTT PF01744.20 ORF135822 - 0.12 12.2 4.4 2.3 8.1 0.2 2.7 2 1 0 2 2 2 0 GLTT repeat (6 copies) Antimicrobial18 PF08130.11 ORF133887 - 0.088 12.9 0.1 0.12 12.5 0.1 1.3 1 0 0 1 1 1 0 Type A lantibiotic family DUF1450 PF07293.11 ORF133801 - 0.075 12.9 2.2 0.12 12.2 2.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) 7TMR-DISM_7TM PF07695.11 ORF133486 - 0.018 15.0 2.2 0.02 14.8 2.2 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling Malate_synthase PF01274.22 ORF132887 - 0.19 10.0 0.3 0.22 9.7 0.3 1.1 1 0 0 1 1 1 0 Malate synthase PCRF PF03462.18 ORF132703 - 0.057 13.3 1.1 0.06 13.2 1.1 1.1 1 0 0 1 1 1 0 PCRF domain Fringe PF02434.16 ORF132703 - 0.13 11.7 1.0 0.15 11.4 1.0 1.3 1 1 0 1 1 1 0 Fringe-like DUF3641 PF12345.8 ORF132600 - 0.081 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3641) DUF2358 PF10184.9 ORF132425 - 0.01 16.1 0.9 0.014 15.6 0.9 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2358) AAA_11 PF13086.6 ORF132287 - 0.088 12.6 0.3 0.093 12.5 0.3 1.1 1 0 0 1 1 1 0 AAA domain ParA PF10609.9 ORF131784 - 0.092 12.2 0.0 0.092 12.2 0.0 1.1 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase TLC PF03219.14 ORF131207 - 0.043 12.5 2.0 0.048 12.4 2.0 1.1 1 0 0 1 1 1 0 TLC ATP/ADP transporter COX8 PF02285.15 ORF131207 - 0.11 12.4 0.5 0.34 10.8 0.5 1.9 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII Ribophorin_II PF05817.14 ORF131207 - 1.8 7.0 4.9 2.2 6.7 4.9 1.0 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II XAF1_C PF18608.1 ORF130645 - 0.038 13.5 0.7 0.057 13.0 0.2 1.5 2 0 0 2 2 2 0 XIAP-associated factor 1 C-terminal domain AP1AR PF15745.5 ORF130476 - 0.14 11.8 0.1 0.16 11.6 0.1 1.0 1 0 0 1 1 1 0 AP-1 complex-associated regulatory protein DUF5466 PF17554.2 ORF130436 - 0.094 12.9 1.1 0.15 12.3 1.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5466) Fer4_4 PF12800.7 ORF128992 - 2 9.1 7.2 5.2 7.8 1.0 2.3 1 1 1 2 2 2 0 4Fe-4S binding domain HECA PF15353.6 ORF127681 - 0.084 13.1 1.7 0.17 12.1 1.5 1.6 1 1 0 1 1 1 0 Headcase protein family homologue Chromo_shadow PF01393.19 ORF127147 - 0.011 15.9 0.3 0.019 15.1 0.3 1.4 1 0 0 1 1 1 0 Chromo shadow domain DUF4752 PF15944.5 ORF126916 - 0.041 13.9 1.0 0.043 13.9 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4752) EB PF01683.18 ORF126916 - 2.4 8.5 10.8 46 4.4 11.3 2.0 1 1 1 2 2 2 0 EB module zf-RING_2 PF13639.6 ORF12667 - 3.2e-09 37.0 2.5 5.3e-09 36.3 2.5 1.4 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF12667 - 1.1e-07 32.0 4.7 1.1e-07 32.0 4.7 1.6 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF12667 - 3.2e-06 26.9 2.2 6.4e-06 25.9 2.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF12667 - 2e-05 24.2 1.0 4.1e-05 23.2 1.0 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF12667 - 0.00068 19.4 1.5 0.00068 19.4 1.5 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF12667 - 0.00094 19.2 0.7 0.0015 18.5 0.7 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF12667 - 0.0024 17.8 1.0 0.0024 17.8 1.0 1.8 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF12667 - 0.0046 17.0 2.8 0.0046 17.0 2.8 1.9 2 0 0 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF12667 - 0.0063 16.3 1.1 0.012 15.5 1.1 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF12667 - 0.02 14.5 2.8 0.037 13.7 2.8 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type STAG PF08514.11 ORF125455 - 0.26 11.2 1.0 0.3 11.0 1.0 1.1 1 0 0 1 1 1 0 STAG domain DUF2325 PF10087.9 ORF125139 - 0.038 14.1 0.3 0.048 13.8 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2325) Thioredoxin_2 PF13098.6 ORF124804 - 0.099 13.1 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain CD20 PF04103.15 ORF124415 - 0.019 15.1 1.0 0.023 14.8 1.0 1.1 1 0 0 1 1 1 0 CD20-like family TMEM51 PF15345.6 ORF124415 - 0.033 14.0 0.4 0.04 13.7 0.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 51 DUF417 PF04224.12 ORF124415 - 0.06 12.9 0.0 0.061 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF417 RNHCP PF12647.7 ORF123914 - 0.058 13.4 0.1 0.08 12.9 0.1 1.2 1 0 0 1 1 1 0 RNHCP domain DUF4552 PF15089.6 ORF123337 - 0.018 14.1 0.6 0.021 13.9 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) CusF_Ec PF11604.8 ORF123337 - 0.18 11.8 0.0 0.23 11.4 0.0 1.1 1 0 0 1 1 1 0 Copper binding periplasmic protein CusF SR-25 PF10500.9 ORF123110 - 0.0026 17.4 11.3 0.0029 17.3 11.3 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein DUF4653 PF15546.6 ORF123110 - 0.16 11.6 4.9 0.17 11.4 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4653) PAP1 PF08601.10 ORF123110 - 1 9.0 11.2 1 9.0 11.2 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 DUF966 PF06136.13 ORF122301 - 0.037 13.8 0.0 0.04 13.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Churchill PF06573.11 ORF122301 - 0.059 13.7 0.0 0.087 13.2 0.0 1.3 1 0 0 1 1 1 0 Churchill protein DUF3641 PF12345.8 ORF122290 - 0.081 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3641) DUF5466 PF17554.2 ORF122239 - 0.094 12.9 1.1 0.15 12.3 1.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5466) Corazonin PF17308.2 ORF122230 - 0.066 13.6 0.1 0.074 13.4 0.1 1.1 1 0 0 1 1 1 0 Pro-corazonin zf-CCCH_6 PF18585.1 ORF121342 - 0.025 14.5 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 Thioredoxin_2 PF13098.6 ORF1197 - 0.099 13.1 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Colicin_K PF17500.2 ORF119363 - 0.049 14.2 0.1 0.073 13.6 0.1 1.3 1 1 0 1 1 1 0 Colicin-K YadA_anchor PF03895.15 ORF119361 - 5.4e-21 74.5 8.2 5.4e-21 74.5 8.2 1.4 2 0 0 2 2 2 1 YadA-like membrane anchor domain TRAP-gamma PF07074.12 ORF118529 - 0.71 9.4 3.5 1.3 8.6 3.5 1.6 1 1 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) SPDY PF03771.16 ORF118415 - 0.016 15.1 1.2 0.016 15.1 1.2 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF317) AsiA PF09010.10 ORF117610 - 0.042 13.9 0.0 0.064 13.4 0.0 1.2 1 0 0 1 1 1 0 Anti-Sigma Factor A DUF1286 PF06939.11 ORF116927 - 0.07 13.4 0.2 0.24 11.7 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1286) DUF1283 PF06932.11 ORF116820 - 0.07 13.3 0.1 0.088 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1283) INTS5_N PF14837.6 ORF116660 - 0.0028 17.3 0.2 0.0028 17.3 0.2 1.1 1 0 0 1 1 1 1 Integrator complex subunit 5 N-terminus BAG6 PF12057.8 ORF115966 - 0.18 11.5 0.1 0.28 10.9 0.1 1.4 1 1 0 1 1 1 0 BCL2-associated athanogene 6 DUF295 PF03478.18 ORF11586 - 0.098 12.3 0.3 0.17 11.4 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF295) DUF1286 PF06939.11 ORF115448 - 0.07 13.4 0.2 0.24 11.7 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1286) zf-FLZ PF04570.14 ORF113930 - 0.4 10.2 3.6 0.66 9.5 3.6 1.3 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 DUF1069 PF06370.11 ORF113919 - 0.54 9.8 5.7 0.59 9.7 5.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1069) Hydrophobin_2 PF06766.11 ORF112897 - 0.0091 15.9 0.4 0.013 15.4 0.4 1.2 1 0 0 1 1 1 1 Fungal hydrophobin HECA PF15353.6 ORF111015 - 0.084 13.1 1.7 0.17 12.1 1.5 1.6 1 1 0 1 1 1 0 Headcase protein family homologue Hpre_diP_synt_I PF07456.11 ORF110203 - 0.0003 20.8 4.0 0.00039 20.4 4.0 1.1 1 0 0 1 1 1 1 Heptaprenyl diphosphate synthase component I Arabinose_Iso_C PF11762.8 ORF108347 - 0.12 12.3 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 L-arabinose isomerase C-terminal domain Succ_CoA_lig PF13607.6 ORF108325 - 0.052 13.4 0.1 0.061 13.1 0.1 1.2 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain DUF4846 PF16138.5 ORF108322 - 0.069 12.6 0.0 0.08 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (4846) BPD_transp_1 PF00528.22 ORF108271 - 5.5e-09 36.0 2.7 5.9e-09 35.9 2.7 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component NICE-1 PF15845.5 ORF10748 - 0.17 12.6 9.5 0.18 12.6 9.1 1.3 1 1 0 1 1 1 0 Cysteine-rich C-terminal 1 family DUF423 PF04241.15 ORF107118 - 6.4 7.1 6.4 13 6.1 5.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF423) TMEM208_SND2 PF05620.11 ORF106632 - 0.03 14.1 0.3 0.032 14.0 0.3 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 Zn-ribbon_8 PF09723.10 ORF106292 - 0.33 11.1 1.6 13 6.0 0.2 2.4 1 1 2 3 3 3 0 Zinc ribbon domain zinc_ribbon_11 PF11682.8 ORF105956 - 0.048 13.7 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Probable zinc-ribbon DUF4542 PF15075.6 ORF105686 - 0.039 14.3 0.3 0.05 14.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4542) Peptidase_C1 PF00112.23 ORF10542 - 5.5e-25 88.7 0.1 5.8e-25 88.7 0.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF10542 - 0.00067 18.6 0.1 0.00076 18.4 0.1 1.0 1 0 0 1 1 1 1 Peptidase C1-like family RecR PF02132.15 ORF104927 - 0.081 12.5 1.4 0.1 12.2 0.7 1.6 2 0 0 2 2 2 0 RecR protein DUF2956 PF11169.8 ORF104289 - 0.48 10.6 9.7 0.089 13.0 5.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2956) Tmemb_9 PF05434.11 ORF102120 - 0.11 12.4 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 TMEM9 WRC PF08879.10 ORF102001 - 0.66 9.7 7.7 0.26 11.0 4.9 1.8 2 0 0 2 2 2 0 WRC Kinin PF08260.11 ORF101208 - 0.14 12.7 2.5 0.39 11.3 2.5 1.8 1 0 0 1 1 1 0 Insect kinin peptide DUF5529 PF17669.1 ORF101117 - 0.022 14.8 1.3 0.025 14.6 1.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5529) Enterotoxin_HS1 PF08090.11 NODE_62241_length_262_cov_0.973568_g54301_i0forward_frame_1 - 0.14 12.2 0.1 0.2 11.6 0.1 1.2 1 0 0 1 1 1 0 Heat stable E.coli enterotoxin 1 Spo7_2_N PF15407.6 NODE_62237_length_262_cov_1.057269_g54297_i0forward_frame_1 - 0.0085 15.7 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Sporulation protein family 7 PKI PF02827.16 NODE_62236_length_262_cov_1.079295_g54296_i0reverse_frame_1 - 0.1 12.8 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 cAMP-dependent protein kinase inhibitor zf-CCCH PF00642.24 NODE_62234_length_262_cov_1.101322_g54294_i0forward_frame_1 - 0.13 12.2 1.2 0.13 12.2 1.2 1.9 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_62234_length_262_cov_1.101322_g54294_i0forward_frame_1 - 0.27 11.4 2.0 0.7 10.0 0.6 2.1 2 0 0 2 2 2 0 Zinc finger domain cNMP_binding PF00027.29 NODE_62231_length_262_cov_1.162996_g54291_i0reverse_frame_1 - 3.5e-10 39.8 0.0 4.3e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Adeno_E3_14_5 PF04834.12 NODE_62219_length_262_cov_1.405286_g54279_i0reverse_frame_1 - 0.18 12.4 0.5 0.23 12.0 0.5 1.4 1 0 0 1 1 1 0 Early E3 14.5 kDa protein Imm71 PF15602.6 NODE_62219_length_262_cov_1.405286_g54279_i0forward_frame_1 - 0.19 11.8 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 71 HPIH PF13323.6 NODE_62215_length_262_cov_1.431718_g54275_i0forward_frame_1 - 0.06 13.2 0.3 0.074 12.9 0.3 1.1 1 0 0 1 1 1 0 N-terminal domain with HPIH motif ubiquitin PF00240.23 NODE_62213_length_262_cov_1.488987_g54273_i0reverse_frame_1 - 2.9e-05 23.7 0.1 8.3e-05 22.3 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin family HTH_37 PF13744.6 NODE_62211_length_262_cov_1.497797_g54271_i0reverse_frame_1 - 0.14 12.1 0.1 0.26 11.3 0.0 1.5 2 0 0 2 2 2 0 Helix-turn-helix domain zf-MYST PF17772.1 NODE_62209_length_262_cov_1.515419_g54269_i0forward_frame_1 - 0.057 13.0 0.2 0.057 13.0 0.2 1.9 2 0 0 2 2 2 0 MYST family zinc finger domain NmrA PF05368.13 NODE_62209_length_262_cov_1.515419_g54269_i0forward_frame_1 - 0.088 12.4 0.1 0.094 12.3 0.1 1.1 1 0 0 1 1 1 0 NmrA-like family Connexin40_C PF16791.5 NODE_62201_length_262_cov_1.612335_g54261_i0reverse_frame_1 - 0.029 15.7 0.5 0.039 15.2 0.5 1.3 1 0 0 1 1 1 0 Connexin 40 C-terminal domain 60KD_IMP PF02096.20 NODE_62198_length_262_cov_1.687225_g54258_i0forward_frame_1 - 1.9e-23 83.2 1.5 1.9e-23 83.2 1.5 1.7 2 0 0 2 2 2 1 60Kd inner membrane protein Vpu PF00558.19 NODE_62198_length_262_cov_1.687225_g54258_i0forward_frame_1 - 0.015 15.1 0.1 0.019 14.7 0.1 1.3 1 0 0 1 1 1 0 Vpu protein OAD_beta PF03977.13 NODE_62198_length_262_cov_1.687225_g54258_i0forward_frame_1 - 0.11 11.5 0.1 0.13 11.2 0.1 1.0 1 0 0 1 1 1 0 Na+-transporting oxaloacetate decarboxylase beta subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks302.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks302.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks302.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks302.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PDGF PF00341.17 NODE_62194_length_262_cov_1.775330_g54254_i0reverse_frame_1 - 0.26 11.6 4.2 0.21 11.9 2.4 1.7 1 1 1 2 2 2 0 PDGF/VEGF domain Catalase-rel PF06628.12 NODE_62194_length_262_cov_1.775330_g54254_i0forward_frame_1 - 0.092 13.0 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Catalase-related immune-responsive SEC-C PF02810.15 NODE_62193_length_262_cov_1.788546_g54253_i0reverse_frame_1 - 0.11 12.5 6.1 0.18 11.8 6.1 1.4 1 0 0 1 1 1 0 SEC-C motif Wzz PF02706.15 NODE_62186_length_262_cov_1.903084_g54246_i0reverse_frame_1 - 0.11 12.8 0.2 0.15 12.3 0.2 1.2 1 0 0 1 1 1 0 Chain length determinant protein Orai-1 PF07856.12 NODE_62186_length_262_cov_1.903084_g54246_i0reverse_frame_1 - 0.31 10.7 4.7 2.1 8.0 4.6 1.9 1 1 0 1 1 1 0 Mediator of CRAC channel activity zf-RanBP PF00641.18 NODE_62181_length_262_cov_2.004405_g54241_i0reverse_frame_1 - 5 6.5 10.8 12 5.4 8.7 2.2 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others DUF3785 PF12653.7 NODE_62181_length_262_cov_2.004405_g54241_i0forward_frame_1 - 0.0064 16.6 1.7 0.0079 16.3 1.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3785) DUF5099 PF17025.5 NODE_62181_length_262_cov_2.004405_g54241_i0forward_frame_1 - 0.11 12.9 1.7 0.13 12.7 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5099) Fer2_4 PF13510.6 NODE_62180_length_262_cov_2.013216_g54240_i0forward_frame_1 - 0.084 12.9 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Peripla_BP_4 PF13407.6 NODE_62173_length_262_cov_2.211454_g54233_i0forward_frame_1 - 1.9e-20 73.5 0.0 2.1e-20 73.4 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_6 PF13458.6 NODE_62173_length_262_cov_2.211454_g54233_i0forward_frame_1 - 0.025 14.2 0.1 0.026 14.2 0.1 1.0 1 0 0 1 1 1 0 Periplasmic binding protein HPTransfase PF10090.9 NODE_62167_length_262_cov_2.299559_g54227_i0forward_frame_1 - 0.13 12.0 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Histidine phosphotransferase C-terminal domain DUF2177 PF09945.9 NODE_62162_length_262_cov_2.488987_g54222_i0forward_frame_1 - 0.026 14.6 0.3 0.037 14.1 0.3 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2177) DUF4889 PF16230.5 NODE_62158_length_262_cov_2.590308_g54218_i0reverse_frame_1 - 0.081 13.2 0.2 0.12 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4889) Peptidase_C34 PF05413.11 NODE_62158_length_262_cov_2.590308_g54218_i0forward_frame_1 - 0.025 14.8 0.0 0.028 14.7 0.0 1.1 1 0 0 1 1 1 0 Putative closterovirus papain-like endopeptidase B56 PF01603.20 NODE_62156_length_262_cov_2.612335_g54216_i0forward_frame_1 - 5.4e-22 78.3 2.3 5.8e-22 78.2 2.3 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) DUF1422 PF07226.11 NODE_62152_length_262_cov_2.784141_g54212_i0forward_frame_1 - 0.053 13.5 1.4 0.064 13.3 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1422) Dickkopf_N PF04706.12 NODE_62145_length_262_cov_3.022026_g54205_i0reverse_frame_1 - 0.21 12.1 0.3 0.21 12.1 0.3 2.1 2 1 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region DUF4027 PF13219.6 NODE_62138_length_262_cov_3.867841_g54198_i0reverse_frame_1 - 0.69 9.8 2.5 7.6 6.5 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4027) Acyl_transf_1 PF00698.21 NODE_62137_length_262_cov_3.938326_g54197_i0forward_frame_1 - 0.13 11.7 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 Acyl transferase domain RRM_1 PF00076.22 NODE_62132_length_262_cov_16.863436_g54192_i0reverse_frame_1 - 0.0072 16.1 0.2 0.011 15.5 0.2 1.5 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Prolamin_like PF05617.11 NODE_62124_length_262_cov_43.000000_g54184_i0forward_frame_1 - 0.0027 17.8 0.1 0.0034 17.5 0.1 1.2 1 0 0 1 1 1 1 Prolamin-like zf-C4 PF00105.18 NODE_62121_length_262_cov_45.951542_g54181_i0reverse_frame_1 - 0.081 13.4 5.5 0.11 12.9 5.5 1.3 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) IBV_3B PF03622.13 NODE_62120_length_262_cov_46.330396_g54180_i0reverse_frame_1 - 0.095 12.9 1.0 0.13 12.4 1.0 1.4 1 1 0 1 1 1 0 IBV 3B protein DUF4508 PF14969.6 NODE_62117_length_262_cov_51.497797_g54177_i0forward_frame_1 - 0.011 16.0 0.7 0.015 15.5 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) UBA PF00627.31 NODE_62114_length_262_cov_57.185022_g54174_i0forward_frame_1 - 4e-10 39.4 1.4 6.2e-10 38.8 1.4 1.3 1 0 0 1 1 1 1 UBA/TS-N domain S-antigen PF05756.11 NODE_62108_length_262_cov_71.700441_g54168_i0reverse_frame_1 - 6.6 7.2 12.1 1.8 9.0 2.7 2.1 2 0 0 2 2 2 0 S-antigen protein Methyltransf_30 PF05430.11 NODE_62107_length_262_cov_72.083700_g54167_i0reverse_frame_1 - 0.18 11.7 0.1 0.23 11.3 0.1 1.1 1 0 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase ER_lumen_recept PF00810.18 NODE_62095_length_262_cov_105.885463_g54155_i0forward_frame_1 - 0.1 13.4 2.6 0.12 13.2 2.6 1.0 1 0 0 1 1 1 0 ER lumen protein retaining receptor Chlam_OMP3 PF03503.13 NODE_62093_length_262_cov_111.660793_g54153_i0reverse_frame_1 - 0.0053 17.0 5.7 1.3 9.4 2.3 2.3 2 1 0 2 2 2 2 Chlamydia cysteine-rich outer membrane protein 3 EF-hand_8 PF13833.6 NODE_62085_length_262_cov_142.577093_g54145_i0reverse_frame_1 - 0.0016 18.3 0.2 0.09 12.6 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_62085_length_262_cov_142.577093_g54145_i0reverse_frame_1 - 0.0069 16.2 0.2 2.8 8.1 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 NODE_62085_length_262_cov_142.577093_g54145_i0reverse_frame_1 - 0.032 13.8 0.3 1.7 8.4 0.1 2.3 2 0 0 2 2 2 0 EF hand EF-hand_7 PF13499.6 NODE_62085_length_262_cov_142.577093_g54145_i0reverse_frame_1 - 0.069 13.6 0.4 0.11 13.0 0.4 1.3 1 0 0 1 1 1 0 EF-hand domain pair E7 PF00527.18 NODE_62082_length_262_cov_152.083700_g54142_i0forward_frame_1 - 0.13 12.5 0.1 0.15 12.3 0.1 1.1 1 0 0 1 1 1 0 E7 protein, Early protein Nepo_coat_C PF03688.14 NODE_62077_length_262_cov_240.969163_g54137_i0reverse_frame_1 - 0.033 14.1 0.0 0.036 13.9 0.0 1.0 1 0 0 1 1 1 0 Nepovirus coat protein, C-terminal domain p450 PF00067.22 NODE_62077_length_262_cov_240.969163_g54137_i0forward_frame_1 - 7.9e-13 48.0 0.0 8.5e-13 47.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 PAP_fibrillin PF04755.12 NODE_62072_length_262_cov_577.872247_g54132_i0reverse_frame_1 - 0.014 15.3 0.2 0.016 15.2 0.2 1.1 1 0 0 1 1 1 0 PAP_fibrillin His_biosynth PF00977.21 NODE_62067_length_262_cov_51393.823789_g54127_i0forward_frame_1 - 0.045 13.2 0.1 0.045 13.2 0.1 1.1 1 0 0 1 1 1 0 Histidine biosynthesis protein HycH PF07450.11 NODE_62062_length_263_cov_1.052632_g54122_i0reverse_frame_1 - 0.19 12.1 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 Formate hydrogenlyase maturation protein HycH MFS_1 PF07690.16 NODE_62061_length_263_cov_1.074561_g54121_i0forward_frame_1 - 0.00021 20.3 0.9 0.00024 20.1 0.9 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ABA_WDS PF02496.16 NODE_62056_length_263_cov_1.206140_g54116_i0reverse_frame_1 - 0.024 15.1 1.3 0.031 14.7 0.3 1.7 2 0 0 2 2 2 0 ABA/WDS induced protein Sec1 PF00995.23 NODE_62055_length_263_cov_1.214912_g54115_i0reverse_frame_1 - 1.9e-18 67.0 0.0 2.1e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 Sec1 family ATP-synt_S1 PF05827.12 NODE_62048_length_263_cov_1.280702_g54108_i0forward_frame_1 - 0.64 9.8 4.3 0.91 9.3 4.3 1.3 1 1 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) Gln-synt_N PF03951.19 NODE_62042_length_263_cov_1.350877_g54102_i0reverse_frame_1 - 0.05 13.3 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 Glutamine synthetase, beta-Grasp domain UCH PF00443.29 NODE_62041_length_263_cov_1.364035_g54101_i0forward_frame_1 - 6.4e-11 42.2 0.7 7.3e-11 42.1 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_62041_length_263_cov_1.364035_g54101_i0forward_frame_1 - 0.0013 18.4 0.0 0.0016 18.1 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase SRTM1 PF15872.5 NODE_62040_length_263_cov_1.381579_g54100_i0reverse_frame_1 - 0.088 13.0 0.7 0.11 12.6 0.7 1.2 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 zf-C3HC4 PF00097.25 NODE_62040_length_263_cov_1.381579_g54100_i0forward_frame_1 - 0.083 12.8 0.9 0.083 12.8 0.9 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF588 PF04535.12 NODE_62038_length_263_cov_1.390351_g54098_i0forward_frame_1 - 0.0043 16.9 0.5 0.0052 16.6 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF588) N-glycanase_N PF09112.10 NODE_62037_length_263_cov_1.403509_g54097_i0reverse_frame_1 - 0.029 14.2 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, N terminal NrfD_2 PF14589.6 NODE_62034_length_263_cov_1.416667_g54094_i0forward_frame_1 - 0.065 13.2 0.2 0.072 13.1 0.2 1.1 1 0 0 1 1 1 0 Polysulfide reductase DUF1375 PF07119.12 NODE_62034_length_263_cov_1.416667_g54094_i0forward_frame_1 - 0.083 13.3 0.5 0.14 12.5 0.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1375) Sas6_CC PF18594.1 NODE_62027_length_263_cov_1.517544_g54087_i0reverse_frame_1 - 1.9 8.4 6.1 12 5.8 1.7 2.3 2 0 0 2 2 2 0 Sas6/XLF/XRCC4 coiled-coil domain TNFR_c6 PF00020.18 NODE_62013_length_263_cov_1.754386_g54073_i0forward_frame_1 - 0.1 13.1 4.7 1.8 9.0 3.2 2.6 1 1 1 2 2 2 0 TNFR/NGFR cysteine-rich region Ephrin_rec_like PF07699.13 NODE_62013_length_263_cov_1.754386_g54073_i0forward_frame_1 - 0.59 9.9 12.9 0.12 12.2 5.3 2.8 2 1 1 3 3 3 0 Putative ephrin-receptor like Lustrin_cystein PF14625.6 NODE_62013_length_263_cov_1.754386_g54073_i0forward_frame_1 - 0.67 10.4 12.9 24 5.4 8.3 3.2 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain zf-U1 PF06220.12 NODE_62010_length_263_cov_1.780702_g54070_i0forward_frame_1 - 1 9.2 4.4 3.4 7.5 0.9 2.3 2 0 0 2 2 2 0 U1 zinc finger Indigoidine_A PF04227.12 NODE_62005_length_263_cov_1.912281_g54065_i0reverse_frame_1 - 1.5e-36 126.3 0.2 1.6e-36 126.2 0.2 1.0 1 0 0 1 1 1 1 Indigoidine synthase A like protein DUF1262 PF06880.11 NODE_62005_length_263_cov_1.912281_g54065_i0reverse_frame_1 - 0.12 12.8 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1262) Exo_endo_phos PF03372.23 NODE_61994_length_263_cov_2.153509_g54054_i0reverse_frame_1 - 0.00081 19.0 0.1 0.001 18.6 0.1 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family DUF1364 PF07102.12 NODE_61994_length_263_cov_2.153509_g54054_i0forward_frame_1 - 0.0032 17.3 0.3 0.0038 17.0 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1364) PARP_regulatory PF01358.18 NODE_61984_length_263_cov_2.583333_g54044_i0reverse_frame_1 - 0.017 14.1 0.1 0.017 14.1 0.1 1.1 1 0 0 1 1 1 0 Poly A polymerase regulatory subunit Urm1 PF09138.11 NODE_61984_length_263_cov_2.583333_g54044_i0forward_frame_1 - 0.068 13.5 0.5 0.099 13.0 0.4 1.3 1 1 0 1 1 1 0 Urm1 (Ubiquitin related modifier) GATA PF00320.27 NODE_61983_length_263_cov_2.583333_g54043_i0reverse_frame_1 - 0.039 13.5 3.8 0.53 9.9 0.6 2.4 2 0 0 2 2 2 0 GATA zinc finger VHL PF01847.16 NODE_61980_length_263_cov_2.710526_g54040_i0reverse_frame_1 - 0.074 13.0 0.4 0.11 12.4 0.4 1.2 1 0 0 1 1 1 0 VHL beta domain DUF5464 PF17552.2 NODE_61976_length_263_cov_2.894737_g54036_i0reverse_frame_1 - 0.099 12.9 0.4 0.14 12.4 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5464) FMO-like PF00743.19 NODE_61976_length_263_cov_2.894737_g54036_i0forward_frame_1 - 6.4e-06 24.9 0.0 6.6e-06 24.8 0.0 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 NODE_61976_length_263_cov_2.894737_g54036_i0forward_frame_1 - 0.0027 17.9 0.0 0.0038 17.4 0.0 1.3 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Arm_3 PF16186.5 NODE_61976_length_263_cov_2.894737_g54036_i0forward_frame_1 - 0.062 12.9 0.1 0.087 12.4 0.1 1.3 1 0 0 1 1 1 0 Atypical Arm repeat Humanin PF15040.6 NODE_61975_length_263_cov_2.942982_g54035_i0reverse_frame_1 - 3.8 7.0 7.5 0.45 10.0 0.4 2.3 2 0 0 2 2 2 0 Humanin family DUF809 PF05663.11 NODE_61972_length_263_cov_3.135965_g54032_i0reverse_frame_1 - 0.82 9.8 3.9 0.96 9.6 3.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF809) Imm43 PF15570.6 NODE_61972_length_263_cov_3.135965_g54032_i0reverse_frame_1 - 1.1 9.3 9.6 2.9 7.9 1.1 2.1 1 1 1 2 2 2 0 Immunity protein 43 Spc7 PF08317.11 NODE_61972_length_263_cov_3.135965_g54032_i0forward_frame_1 - 0.013 14.4 2.6 0.015 14.2 2.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein CN_hydrolase PF00795.22 NODE_61966_length_263_cov_3.671053_g54026_i0reverse_frame_1 - 7.3e-08 32.1 0.0 8.7e-08 31.8 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF3385 PF11865.8 NODE_61966_length_263_cov_3.671053_g54026_i0reverse_frame_1 - 0.17 11.8 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) BRD4_CDT PF17105.5 NODE_61966_length_263_cov_3.671053_g54026_i0forward_frame_1 - 0.13 11.9 0.1 0.13 11.9 0.1 1.5 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 ABC_tran PF00005.27 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 4.5e-08 33.7 0.2 8.6e-08 32.8 0.1 1.5 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 6.6e-05 22.4 0.1 7.3e-05 22.3 0.1 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 0.022 15.0 0.0 0.03 14.6 0.0 1.3 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DEAD PF00270.29 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 0.039 13.7 0.0 0.061 13.1 0.0 1.3 1 1 0 1 1 1 0 DEAD/DEAH box helicase MoaE PF02391.17 NODE_61965_length_263_cov_3.679825_g54025_i0reverse_frame_1 - 0.094 13.0 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 MoaE protein DUF5317 PF17248.2 NODE_61965_length_263_cov_3.679825_g54025_i0forward_frame_1 - 0.097 12.7 5.5 0.12 12.4 5.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5317) DUF1496 PF07383.12 NODE_61962_length_263_cov_4.105263_g54022_i0forward_frame_1 - 0.057 13.0 0.4 0.098 12.3 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1496) NETI PF14044.6 NODE_61961_length_263_cov_4.157895_g54021_i0reverse_frame_1 - 0.14 11.9 0.1 2 8.2 0.1 2.1 2 0 0 2 2 2 0 NETI protein Pkinase PF00069.25 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 2.2e-25 89.5 1.2 2.4e-25 89.4 1.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 2.1e-12 46.9 0.2 2.4e-12 46.7 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 4.1e-09 36.1 0.4 4.5e-09 36.0 0.4 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 1e-05 25.6 0.0 1.1e-05 25.4 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 3.7e-05 23.4 0.7 4.3e-05 23.2 0.7 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase EcKinase PF02958.20 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.00021 20.7 0.1 0.00022 20.6 0.1 1.1 1 0 0 1 1 1 1 Ecdysteroid kinase RIO1 PF01163.22 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.002 17.7 0.1 0.0022 17.6 0.1 1.1 1 0 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.0033 16.2 0.2 0.0036 16.1 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.0054 16.4 0.1 0.0064 16.1 0.1 1.2 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 DUF1679 PF07914.11 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.0085 15.0 0.1 0.0093 14.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) YrbL-PhoP_reg PF10707.9 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.029 13.9 0.2 0.032 13.8 0.2 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL WaaY PF06176.11 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.036 13.7 0.1 0.039 13.6 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide core biosynthesis protein (WaaY) Kinase-like PF14531.6 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_1 - 0.053 12.8 0.0 0.053 12.8 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Amnionless PF14828.6 NODE_61959_length_263_cov_4.881579_g54019_i0forward_frame_1 - 3.1 6.5 11.3 3.7 6.3 11.3 1.1 1 0 0 1 1 1 0 Amnionless Cadherin_tail PF15974.5 NODE_61954_length_263_cov_25.232456_g54014_i0reverse_frame_1 - 2 8.7 8.5 2.8 8.3 8.5 1.2 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region DUF5066 PF16728.5 NODE_61953_length_263_cov_28.587719_g54013_i0reverse_frame_1 - 0.062 12.6 0.0 0.063 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5066) Holin_BhlA PF10960.8 NODE_61951_length_263_cov_30.592105_g54011_i0reverse_frame_1 - 0.029 14.3 0.1 0.044 13.8 0.1 1.2 1 0 0 1 1 1 0 BhlA holin family DUF3399 PF11879.8 NODE_61948_length_263_cov_47.894737_g54008_i0reverse_frame_1 - 0.076 13.4 0.3 0.091 13.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) IHO1 PF15771.5 NODE_61946_length_263_cov_48.837719_g54006_i0forward_frame_1 - 0.029 13.2 2.2 0.031 13.0 2.2 1.1 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 Imm71 PF15602.6 NODE_61942_length_263_cov_53.482456_g54002_i0reverse_frame_1 - 0.04 14.0 0.0 0.052 13.6 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 71 TPR_8 PF13181.6 NODE_61940_length_263_cov_59.140351_g54000_i0forward_frame_1 - 0.066 13.5 0.1 0.11 12.7 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat FcoT PF10862.8 NODE_61939_length_263_cov_59.491228_g53999_i0forward_frame_1 - 0.046 13.3 0.0 0.05 13.2 0.0 1.1 1 0 0 1 1 1 0 FcoT-like thioesterase domain Ac81 PF05820.11 NODE_61939_length_263_cov_59.491228_g53999_i0forward_frame_1 - 0.75 9.3 5.4 0.86 9.2 5.4 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 MORN PF02493.20 NODE_61938_length_263_cov_60.578947_g53998_i0forward_frame_1 - 0.00016 21.4 4.7 0.00025 20.8 4.7 1.3 1 0 0 1 1 1 1 MORN repeat Tudor_FRX1 PF18336.1 NODE_61938_length_263_cov_60.578947_g53998_i0forward_frame_1 - 0.32 11.0 1.0 0.35 10.8 0.1 1.5 2 0 0 2 2 2 0 Fragile X mental retardation Tudor domain DUF3292 PF11696.8 NODE_61932_length_263_cov_67.942982_g53992_i0reverse_frame_1 - 0.25 9.7 5.2 0.31 9.4 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) ETRAMP PF09716.10 NODE_61932_length_263_cov_67.942982_g53992_i0forward_frame_1 - 9.3 6.4 5.8 15 5.7 5.8 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) CodY PF06018.14 NODE_61917_length_263_cov_137.048246_g53977_i0reverse_frame_1 - 0.1 12.1 1.8 4.3 6.8 0.3 2.0 1 1 1 2 2 2 0 CodY GAF-like domain Cytochrom_D1 PF02239.16 NODE_61915_length_263_cov_164.320175_g53975_i0reverse_frame_1 - 0.056 12.0 0.0 0.06 11.9 0.0 1.0 1 0 0 1 1 1 0 Cytochrome D1 heme domain TAFA PF12020.8 NODE_61914_length_263_cov_164.596491_g53974_i0forward_frame_1 - 0.85 10.1 6.3 9.9 6.7 2.3 2.1 1 1 1 2 2 2 0 TAFA family MORN PF02493.20 NODE_61909_length_263_cov_254.986842_g53969_i0reverse_frame_1 - 2.2e-21 74.4 31.4 1.1e-06 28.2 2.9 4.1 4 0 0 4 4 4 4 MORN repeat PAP_central PF04928.17 NODE_61908_length_263_cov_295.131579_g53968_i0forward_frame_1 - 0.064 12.2 0.2 0.075 12.0 0.2 1.1 1 0 0 1 1 1 0 Poly(A) polymerase central domain DUF2834 PF11196.8 NODE_61900_length_264_cov_0.947598_g53960_i0reverse_frame_1 - 0.023 15.0 0.3 0.028 14.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2834) PQQ PF01011.21 NODE_61900_length_264_cov_0.947598_g53960_i0forward_frame_1 - 3.1e-05 23.7 0.3 0.0032 17.3 0.0 2.2 2 0 0 2 2 2 2 PQQ enzyme repeat PQQ_3 PF13570.6 NODE_61900_length_264_cov_0.947598_g53960_i0forward_frame_1 - 3.3e-05 24.2 0.0 0.0059 17.1 0.0 2.2 2 0 0 2 2 2 2 PQQ-like domain PQQ_2 PF13360.6 NODE_61900_length_264_cov_0.947598_g53960_i0forward_frame_1 - 0.00012 21.8 0.0 0.00013 21.6 0.0 1.0 1 0 0 1 1 1 1 PQQ-like domain Viral_Beta_CD PF04530.12 NODE_61898_length_264_cov_1.030568_g53958_i0reverse_frame_1 - 0.048 13.9 1.5 0.053 13.8 1.5 1.1 1 0 0 1 1 1 0 Viral Beta C/D like family Baculo_p24 PF05073.12 NODE_61894_length_264_cov_1.048035_g53954_i0reverse_frame_1 - 0.069 12.9 0.0 0.093 12.5 0.0 1.2 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Rer1 PF03248.13 NODE_61894_length_264_cov_1.048035_g53954_i0reverse_frame_1 - 0.076 12.7 0.0 0.1 12.3 0.0 1.3 1 1 0 1 1 1 0 Rer1 family MMR_HSR1 PF01926.23 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 5.5e-17 61.9 0.0 6.2e-17 61.7 0.0 1.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 5.3e-08 32.5 0.0 6.6e-08 32.2 0.0 1.1 1 0 0 1 1 1 1 Ferrous iron transport protein B ABC_tran PF00005.27 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.043 14.3 0.0 0.044 14.3 0.0 1.2 1 0 0 1 1 1 0 ABC transporter AAA PF00004.29 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.057 13.8 0.0 0.057 13.8 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Roc PF08477.13 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.069 13.4 0.0 0.077 13.2 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.14 11.6 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family Dynamin_N PF00350.23 NODE_61894_length_264_cov_1.048035_g53954_i0forward_frame_1 - 0.19 11.8 0.0 0.55 10.3 0.0 1.7 1 1 1 2 2 2 0 Dynamin family PHA_synth_III_E PF09712.10 NODE_61891_length_264_cov_1.144105_g53951_i0forward_frame_1 - 0.084 12.0 0.0 0.084 12.0 0.0 1.1 1 0 0 1 1 1 0 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) Vps36-NZF-N PF16988.5 NODE_61888_length_264_cov_1.209607_g53948_i0reverse_frame_1 - 0.0056 16.1 0.8 0.0076 15.6 0.8 1.3 1 0 0 1 1 1 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain GATase1_like PF07090.11 NODE_61888_length_264_cov_1.209607_g53948_i0reverse_frame_1 - 0.058 12.8 0.1 0.061 12.7 0.1 1.1 1 0 0 1 1 1 0 Putative glutamine amidotransferase zf-RING_2 PF13639.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 1.1e-09 38.5 9.6 1.1e-09 38.5 9.6 1.8 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 1.4e-07 31.3 9.1 1.4e-07 31.3 9.1 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 4e-07 30.2 10.1 1.3e-06 28.6 10.1 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 2.8e-06 27.0 9.9 2.8e-06 27.0 9.9 2.7 3 0 0 3 3 3 1 RING-like zinc finger zf-RING_5 PF14634.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 1.9e-05 24.5 7.6 3.2e-05 23.8 7.6 1.4 1 0 0 1 1 1 1 zinc-RING finger domain FANCL_C PF11793.8 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 2.3e-05 24.5 8.7 7.7e-05 22.8 8.7 1.9 1 1 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 2.8e-05 23.6 6.4 2.8e-05 23.6 6.4 2.0 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 5.8e-05 22.9 10.4 0.00048 19.9 10.3 2.3 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 5.9e-05 23.0 2.4 5.9e-05 23.0 2.4 1.8 2 1 0 2 2 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.00021 21.1 6.5 0.00036 20.3 6.5 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.00052 19.9 6.9 0.0015 18.4 3.1 2.1 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-ANAPC11 PF12861.7 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.00076 19.5 5.0 0.0013 18.7 5.0 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.0029 17.7 7.0 0.0054 16.8 7.0 1.5 1 0 0 1 1 1 1 RING-variant domain PHD PF00628.29 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.0039 17.1 6.1 0.0065 16.3 6.1 1.4 1 0 0 1 1 1 1 PHD-finger Prok-RING_4 PF14447.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.0063 16.3 5.5 0.02 14.7 5.4 1.8 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-HC5HC2H_2 PF13832.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.0074 16.4 3.3 0.0074 16.4 3.3 1.5 1 1 0 1 1 1 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.011 16.0 7.2 0.046 14.0 7.3 1.8 1 1 1 2 2 2 0 PHD-like zinc-binding domain zf-RING-like PF08746.11 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.042 14.2 8.1 0.066 13.5 7.1 2.0 1 1 0 1 1 1 0 RING-like domain zf-UDP PF14569.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.053 13.7 3.5 0.069 13.3 3.5 1.2 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-C3HC4_4 PF15227.6 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.11 12.7 6.7 0.42 10.8 6.7 2.0 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Rtf2 PF04641.12 NODE_61888_length_264_cov_1.209607_g53948_i0forward_frame_1 - 0.14 11.5 1.8 0.16 11.3 1.8 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger DUF1726 PF08351.11 NODE_61876_length_264_cov_1.340611_g53936_i0forward_frame_1 - 0.04 13.9 0.1 0.051 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1726) RNA_pol_Rpb1_1 PF04997.12 NODE_61873_length_264_cov_1.375546_g53933_i0reverse_frame_1 - 0.078 12.3 0.1 0.078 12.3 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 1 NPCC PF08058.11 NODE_61873_length_264_cov_1.375546_g53933_i0reverse_frame_1 - 0.58 10.2 3.8 0.69 10.0 3.8 1.0 1 0 0 1 1 1 0 Nuclear pore complex component DUF5604 PF18300.1 NODE_61869_length_264_cov_1.445415_g53929_i0forward_frame_1 - 0.096 12.7 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5604) Fer4_24 PF18109.1 NODE_61869_length_264_cov_1.445415_g53929_i0forward_frame_1 - 0.14 12.5 0.0 0.24 11.7 0.0 1.3 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain Dynamin_N PF00350.23 NODE_61865_length_264_cov_1.506550_g53925_i0reverse_frame_1 - 3.8e-16 59.6 0.0 4.1e-16 59.5 0.0 1.0 1 0 0 1 1 1 1 Dynamin family Glutaredoxin2_C PF04399.13 NODE_61865_length_264_cov_1.506550_g53925_i0reverse_frame_1 - 0.17 11.7 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain DUF5473 PF17567.2 NODE_61864_length_264_cov_1.554585_g53924_i0forward_frame_1 - 0.048 13.9 4.6 0.24 11.7 0.2 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5473) ERGIC_N PF13850.6 NODE_61857_length_264_cov_1.620087_g53917_i0reverse_frame_1 - 0.021 15.2 0.1 0.023 15.1 0.1 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) CR6_interact PF10147.9 NODE_61854_length_264_cov_1.681223_g53914_i0reverse_frame_1 - 0.066 12.9 0.0 0.077 12.7 0.0 1.1 1 0 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 DNA_pol_viral_C PF00336.18 NODE_61854_length_264_cov_1.681223_g53914_i0forward_frame_1 - 0.057 12.8 0.1 0.057 12.8 0.1 1.2 1 1 0 1 1 1 0 DNA polymerase (viral) C-terminal domain Cyclin_N PF00134.23 NODE_61853_length_264_cov_1.681223_g53913_i0reverse_frame_1 - 2.4e-07 30.6 0.1 3.1e-07 30.2 0.1 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 NODE_61853_length_264_cov_1.681223_g53913_i0reverse_frame_1 - 1.9e-05 25.1 0.0 2.2e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Cyclin Rer1 PF03248.13 NODE_61850_length_264_cov_1.707424_g53910_i0forward_frame_1 - 0.025 14.3 0.6 0.04 13.6 0.6 1.3 1 0 0 1 1 1 0 Rer1 family DUF2529 PF10740.9 NODE_61847_length_264_cov_1.746725_g53907_i0forward_frame_1 - 0.13 11.9 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) Jagunal PF07086.12 NODE_61846_length_264_cov_1.751092_g53906_i0forward_frame_1 - 0.12 12.4 1.9 0.15 12.1 1.9 1.0 1 0 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis Skp1 PF01466.19 NODE_61834_length_264_cov_1.903930_g53894_i0reverse_frame_1 - 0.025 14.7 0.2 0.052 13.7 0.2 1.7 1 1 0 1 1 1 0 Skp1 family, dimerisation domain Phage_integrase PF00589.22 NODE_61832_length_264_cov_1.965066_g53892_i0reverse_frame_1 - 1.2e-24 87.0 0.4 1.3e-24 86.9 0.4 1.0 1 0 0 1 1 1 1 Phage integrase family ADSL_C PF10397.9 NODE_61832_length_264_cov_1.965066_g53892_i0reverse_frame_1 - 0.13 12.8 0.1 0.15 12.6 0.1 1.3 1 1 0 1 1 1 0 Adenylosuccinate lyase C-terminus PapG_C PF03628.13 NODE_61829_length_264_cov_1.995633_g53889_i0forward_frame_1 - 0.091 12.7 0.2 2.1 8.2 0.0 2.0 1 1 0 2 2 2 0 PapG chaperone-binding domain Holin_2-3 PF13272.6 NODE_61828_length_264_cov_2.008734_g53888_i0forward_frame_1 - 0.0023 18.2 1.2 0.0029 17.9 1.2 1.2 1 0 0 1 1 1 1 Putative 2/3 transmembrane domain holin LptF_LptG PF03739.14 NODE_61828_length_264_cov_2.008734_g53888_i0forward_frame_1 - 0.16 10.8 4.7 0.18 10.6 4.7 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Macoilin PF09726.9 NODE_61825_length_264_cov_2.052402_g53885_i0forward_frame_1 - 0.73 8.3 4.6 0.76 8.3 4.6 1.0 1 0 0 1 1 1 0 Macoilin family zf-RING_2 PF13639.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 3.9e-10 39.9 9.4 5.1e-10 39.5 9.4 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 6.3e-08 32.2 9.5 6.3e-08 32.2 9.5 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 1.8e-06 28.1 9.4 4.9e-06 26.7 9.4 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 4.6e-06 26.6 3.9 4.6e-06 26.6 3.9 1.7 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 4.5e-05 23.2 8.3 7.1e-05 22.6 8.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.00013 21.9 7.8 0.00019 21.4 7.8 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.00079 19.0 9.9 0.0021 17.6 9.9 1.8 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.00098 19.1 6.3 0.0022 18.0 6.3 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.0051 17.0 7.8 0.014 15.6 7.8 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.0062 16.4 11.3 0.017 14.9 11.3 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.0073 16.2 13.0 0.0099 15.8 5.4 2.1 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 RINGv PF12906.7 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.0088 16.1 3.7 0.015 15.4 3.7 1.4 1 1 0 1 1 1 1 RING-variant domain zf-HC5HC2H_2 PF13832.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.016 15.4 4.9 0.021 15.0 4.8 1.4 1 1 0 1 1 1 0 PHD-zinc-finger like domain PHD PF00628.29 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.035 14.0 8.0 0.062 13.2 8.0 1.4 1 0 0 1 1 1 0 PHD-finger zf-C3HC4_4 PF15227.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.11 12.7 6.7 0.34 11.1 6.7 1.9 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-HC5HC2H PF13771.6 NODE_61816_length_264_cov_2.209607_g53876_i0reverse_frame_1 - 0.11 12.8 6.0 0.19 12.0 5.9 1.5 1 1 1 2 2 2 0 PHD-like zinc-binding domain DASH_Ask1 PF08655.10 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_1 - 0.056 13.3 0.0 0.083 12.8 0.0 1.3 1 0 0 1 1 1 0 DASH complex subunit Ask1 CAAD PF14159.6 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.0018 18.0 3.2 0.0027 17.5 3.2 1.3 1 0 0 1 1 1 1 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase HemY_N PF07219.13 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.005 17.0 2.5 0.0072 16.5 2.5 1.2 1 0 0 1 1 1 1 HemY protein N-terminus TMEM154 PF15102.6 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.015 15.2 2.2 0.017 15.1 2.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Phlebovirus_G1 PF07243.11 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.04 12.3 2.7 0.038 12.4 2.7 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Protocadherin PF08374.11 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 0.35 10.8 2.6 0.35 10.8 2.6 1.2 1 0 0 1 1 1 0 Protocadherin Baculo_11_kDa PF06143.11 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 1.8 8.2 10.6 1.3 8.6 8.0 2.0 2 0 0 2 2 2 0 Baculovirus 11 kDa family RIFIN PF02009.16 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 2.8 7.8 4.2 3.4 7.5 4.2 1.2 1 0 0 1 1 1 0 Rifin Renin_r PF07850.14 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 3.6 8.3 7.4 3.2 8.4 6.8 1.3 1 1 0 1 1 1 0 Renin receptor-like protein ECSCR PF15820.5 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_1 - 9.1 6.2 10.7 16 5.4 10.7 1.5 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Nucleotid_trans PF03407.16 NODE_61803_length_264_cov_2.475983_g53863_i0forward_frame_1 - 6.1e-07 29.6 0.6 2.8e-05 24.2 0.6 2.0 1 1 0 1 1 1 1 Nucleotide-diphospho-sugar transferase Neisseria_TspB PF05616.13 NODE_61797_length_264_cov_2.589520_g53857_i0forward_frame_1 - 4.4 5.7 8.4 4.6 5.6 8.4 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Kazal_2 PF07648.15 NODE_61794_length_264_cov_2.655022_g53854_i0forward_frame_1 - 0.0019 18.2 3.3 0.003 17.7 3.3 1.4 1 0 0 1 1 1 1 Kazal-type serine protease inhibitor domain DUF3986 PF13143.6 NODE_61794_length_264_cov_2.655022_g53854_i0forward_frame_1 - 0.038 15.0 0.0 0.042 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3986) Peripla_BP_4 PF13407.6 NODE_61788_length_264_cov_3.170306_g53848_i0reverse_frame_1 - 5.9e-21 75.2 2.1 6.3e-21 75.1 2.1 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_3 PF13377.6 NODE_61788_length_264_cov_3.170306_g53848_i0reverse_frame_1 - 0.00033 21.0 0.1 0.00034 21.0 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 NODE_61788_length_264_cov_3.170306_g53848_i0reverse_frame_1 - 0.0011 18.4 0.1 0.0011 18.4 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family PyrBI_leader PF08052.11 NODE_61787_length_264_cov_3.497817_g53847_i0forward_frame_1 - 0.07 13.1 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 PyrBI operon leader peptide DUF4620 PF15399.6 NODE_61782_length_264_cov_5.890830_g53842_i0forward_frame_1 - 0.28 11.5 8.1 0.42 11.0 8.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4620) DUF325 PF03804.13 NODE_61780_length_264_cov_27.179039_g53840_i0forward_frame_1 - 0.031 14.3 0.1 0.048 13.7 0.1 1.5 1 1 0 1 1 1 0 Viral proteins of unknown function Spore-coat_CotD PF11122.8 NODE_61772_length_264_cov_44.755459_g53832_i0reverse_frame_1 - 0.052 14.4 0.4 0.064 14.1 0.4 1.2 1 0 0 1 1 1 0 Inner spore coat protein D Med19 PF10278.9 NODE_61769_length_264_cov_49.886463_g53829_i0reverse_frame_1 - 0.028 14.4 1.5 0.031 14.2 1.5 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF883 PF05957.13 NODE_61769_length_264_cov_49.886463_g53829_i0reverse_frame_1 - 0.095 13.3 4.0 0.12 13.0 4.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) FUSC PF04632.12 NODE_61769_length_264_cov_49.886463_g53829_i0reverse_frame_1 - 0.2 10.1 1.4 0.21 10.1 1.4 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Filo_glycop PF01611.16 NODE_61767_length_264_cov_55.388646_g53827_i0reverse_frame_1 - 0.13 11.2 0.4 0.14 11.1 0.4 1.1 1 0 0 1 1 1 0 Filovirus glycoprotein PDZ_6 PF17820.1 NODE_61764_length_264_cov_56.755459_g53824_i0forward_frame_1 - 0.017 15.0 0.2 0.022 14.6 0.2 1.2 1 0 0 1 1 1 0 PDZ domain DUF3446 PF11928.8 NODE_61758_length_264_cov_62.895197_g53818_i0reverse_frame_1 - 1.9 8.8 7.3 1.1 9.6 5.6 1.5 1 1 0 1 1 1 0 Early growth response N-terminal domain ARF7EP_C PF14949.6 NODE_61758_length_264_cov_62.895197_g53818_i0forward_frame_1 - 2 9.1 8.4 3.1 8.5 8.4 1.2 1 0 0 1 1 1 0 ARF7 effector protein C-terminus BCMA-Tall_bind PF09257.10 NODE_61758_length_264_cov_62.895197_g53818_i0forward_frame_1 - 9 6.5 20.4 5 7.3 8.3 3.1 1 1 2 3 3 3 0 BCMA, TALL-1 binding Mito_carr PF00153.27 NODE_61745_length_264_cov_117.781659_g53805_i0forward_frame_1 - 6e-06 26.1 0.0 8e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein FTZ PF03867.14 NODE_61739_length_264_cov_182.419214_g53799_i0forward_frame_1 - 0.026 14.1 0.0 0.027 14.0 0.0 1.1 1 0 0 1 1 1 0 Fushi tarazu (FTZ), N-terminal region BORCS7 PF16088.5 NODE_61732_length_264_cov_452.467249_g53792_i0forward_frame_1 - 0.15 12.4 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 7 TruD PF01142.18 NODE_61732_length_264_cov_452.467249_g53792_i0forward_frame_1 - 0.17 10.7 0.0 0.19 10.5 0.0 1.0 1 0 0 1 1 1 0 tRNA pseudouridine synthase D (TruD) DUF5570 PF17731.1 NODE_61729_length_264_cov_623.655022_g53789_i0reverse_frame_1 - 0.0033 17.5 1.0 0.0039 17.3 1.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5570) Pox_D3 PF04580.13 NODE_61727_length_264_cov_1546.842795_g53787_i0reverse_frame_1 - 0.0024 17.6 0.2 0.0027 17.4 0.2 1.1 1 0 0 1 1 1 1 Chordopoxvirinae D3 protein GSHPx PF00255.19 NODE_61723_length_265_cov_0.921739_g53783_i0reverse_frame_2 - 0.17 11.5 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Glutathione peroxidase CENP-F_C_Rb_bdg PF10490.9 NODE_61720_length_265_cov_1.013043_g53780_i0reverse_frame_3 - 0.15 11.5 0.0 0.23 10.9 0.0 1.2 1 0 0 1 1 1 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 zf-CHC2 PF01807.20 NODE_61720_length_265_cov_1.013043_g53780_i0forward_frame_2 - 0.088 12.6 0.5 0.12 12.2 0.5 1.2 1 0 0 1 1 1 0 CHC2 zinc finger AAA PF00004.29 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 6.8e-21 75.1 0.0 7.9e-21 74.9 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 5.9e-06 26.1 0.0 7e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0001 21.7 0.0 0.00011 21.5 0.0 1.0 1 0 0 1 1 1 1 TIP49 P-loop domain Parvo_NS1 PF01057.17 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.00015 20.9 0.0 0.00017 20.8 0.0 1.1 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 AAA_22 PF13401.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.00049 20.4 0.0 0.00067 20.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0006 20.2 0.0 0.00061 20.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain RNA_helicase PF00910.22 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.00081 19.8 0.0 0.001 19.4 0.0 1.2 1 0 0 1 1 1 1 RNA helicase Mg_chelatase PF01078.21 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.00094 18.6 0.1 0.0011 18.3 0.1 1.2 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0013 18.5 0.0 0.0016 18.2 0.0 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0019 18.4 0.0 0.0022 18.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0039 17.2 0.0 0.004 17.2 0.0 1.1 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0053 17.3 0.0 0.0062 17.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0055 16.1 0.0 0.0059 16.0 0.0 1.2 1 0 0 1 1 1 1 KaiC AAA_28 PF13521.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0056 16.9 0.0 0.0068 16.7 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0075 16.3 0.0 0.0098 15.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0078 15.7 0.0 0.0078 15.7 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region DUF2075 PF09848.9 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.0085 15.4 0.0 0.0099 15.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_25 PF13481.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.015 14.9 0.0 0.015 14.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.017 14.6 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 PhoH-like protein AAA_3 PF07726.11 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.032 14.1 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.05 13.4 0.0 0.055 13.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.054 12.7 0.0 0.057 12.6 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.056 13.2 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.065 13.7 0.0 0.074 13.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.081 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 NACHT domain Bac_DnaA PF00308.18 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.1 12.4 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein ABC_tran PF00005.27 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.12 12.9 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 ABC transporter Sigma54_activat PF00158.26 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.16 11.7 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_19 PF13245.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.19 12.1 0.0 0.2 12.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.2 10.6 0.0 0.22 10.6 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.6 NODE_61719_length_265_cov_1.030435_g53779_i0forward_frame_3 - 0.24 11.1 0.1 0.3 10.8 0.1 1.2 1 0 0 1 1 1 0 AAA domain Carm_PH PF17888.1 NODE_61717_length_265_cov_1.060870_g53777_i0forward_frame_3 - 0.021 15.2 0.3 0.024 15.0 0.3 1.2 1 0 0 1 1 1 0 Carmil pleckstrin homology domain MBR1 PF17058.5 NODE_61715_length_265_cov_1.069565_g53775_i0reverse_frame_2 - 0.035 14.4 0.6 0.038 14.3 0.6 1.1 1 0 0 1 1 1 0 Mitochondrial biogenesis regulation protein 1 PCO_ADO PF07847.12 NODE_61715_length_265_cov_1.069565_g53775_i0forward_frame_3 - 0.13 11.7 0.2 0.15 11.5 0.2 1.1 1 0 0 1 1 1 0 PCO_ADO Prolamin_like PF05617.11 NODE_61713_length_265_cov_1.086957_g53773_i0forward_frame_3 - 0.16 12.2 3.1 0.31 11.2 3.1 1.4 1 0 0 1 1 1 0 Prolamin-like zf_C2H2_13 PF18508.1 NODE_61710_length_265_cov_1.152174_g53770_i0reverse_frame_2 - 0.023 14.3 0.0 0.041 13.5 0.0 1.4 1 0 0 1 1 1 0 Zinc finger domain Tissue_fac PF01108.17 NODE_61710_length_265_cov_1.152174_g53770_i0forward_frame_2 - 0.13 12.1 0.1 0.16 11.8 0.1 1.1 1 0 0 1 1 1 0 Tissue factor TauE PF01925.19 NODE_61709_length_265_cov_1.173913_g53769_i0forward_frame_3 - 5.8e-06 26.1 2.9 6.3e-06 26.0 2.9 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Atthog PF18800.1 NODE_61709_length_265_cov_1.173913_g53769_i0forward_frame_3 - 0.026 14.4 1.7 0.026 14.4 1.7 1.8 1 1 1 2 2 2 0 Attenuator of Hedgehog 7TM_GPCR_Sru PF10322.9 NODE_61707_length_265_cov_1.204348_g53767_i0reverse_frame_2 - 0.026 13.9 5.6 0.03 13.6 5.6 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru AFG1_ATPase PF03969.16 NODE_61704_length_265_cov_1.213043_g53764_i0forward_frame_3 - 2e-05 23.7 0.0 2.2e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 AFG1-like ATPase TFIID_NTD2 PF04494.15 NODE_61700_length_265_cov_1.295652_g53760_i0reverse_frame_3 - 0.036 14.3 0.5 0.042 14.1 0.5 1.1 1 0 0 1 1 1 0 WD40 associated region in TFIID subunit, NTD2 domain Steroid_dh PF02544.16 NODE_61700_length_265_cov_1.295652_g53760_i0forward_frame_3 - 0.019 15.0 0.9 0.021 14.8 0.9 1.1 1 0 0 1 1 1 0 3-oxo-5-alpha-steroid 4-dehydrogenase cNMP_binding PF00027.29 NODE_61699_length_265_cov_1.308696_g53759_i0reverse_frame_2 - 7.7e-09 35.5 0.0 9.7e-09 35.2 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF1561 PF07598.11 NODE_61699_length_265_cov_1.308696_g53759_i0reverse_frame_2 - 0.015 13.6 0.0 0.015 13.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1561) NAD_synthase PF02540.17 NODE_61697_length_265_cov_1.343478_g53757_i0reverse_frame_2 - 0.14 11.2 0.0 0.14 11.2 0.0 1.0 1 0 0 1 1 1 0 NAD synthase TPP_enzyme_N PF02776.18 NODE_61694_length_265_cov_1.373913_g53754_i0forward_frame_2 - 5.8e-12 45.5 0.0 6.7e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Nbl1_Borealin_N PF10444.9 NODE_61693_length_265_cov_1.378261_g53753_i0reverse_frame_2 - 0.21 11.2 2.1 11 5.8 0.3 2.4 2 0 0 2 2 2 0 Nbl1 / Borealin N terminal Pox_D3 PF04580.13 NODE_61692_length_265_cov_1.378261_g53752_i0forward_frame_3 - 0.0033 17.1 1.5 0.0035 17.0 1.5 1.0 1 0 0 1 1 1 1 Chordopoxvirinae D3 protein SpoIISA_toxin PF14171.6 NODE_61691_length_265_cov_1.382609_g53751_i0forward_frame_3 - 0.047 13.4 1.3 0.053 13.2 1.3 1.0 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system AAL_decarboxy PF03306.13 NODE_61691_length_265_cov_1.382609_g53751_i0forward_frame_3 - 0.073 12.4 0.3 0.085 12.2 0.3 1.1 1 0 0 1 1 1 0 Alpha-acetolactate decarboxylase cNMP_binding PF00027.29 NODE_61686_length_265_cov_1.408696_g53746_i0forward_frame_3 - 2e-06 27.8 0.0 2.5e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain TAXi_N PF14543.6 NODE_61686_length_265_cov_1.408696_g53746_i0forward_frame_2 - 0.6 10.3 4.9 0.61 10.3 4.9 1.2 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal ARF7EP_C PF14949.6 NODE_61685_length_265_cov_1.426087_g53745_i0forward_frame_2 - 1.7 9.3 5.1 2.5 8.8 5.1 1.2 1 0 0 1 1 1 0 ARF7 effector protein C-terminus Smac_DIABLO PF09057.10 NODE_61684_length_265_cov_1.443478_g53744_i0reverse_frame_2 - 0.12 11.7 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 Second Mitochondria-derived Activator of Caspases ABC_tran_Xtn PF12848.7 NODE_61681_length_265_cov_1.517391_g53741_i0reverse_frame_3 - 0.015 15.3 4.4 0.023 14.7 4.4 1.3 1 1 0 1 1 1 0 ABC transporter POTRA_TamA_1 PF17243.2 NODE_61681_length_265_cov_1.517391_g53741_i0reverse_frame_3 - 0.037 14.1 0.3 0.054 13.6 0.3 1.3 1 0 0 1 1 1 0 POTRA domain TamA domain 1 Pox_A_type_inc PF04508.12 NODE_61681_length_265_cov_1.517391_g53741_i0reverse_frame_3 - 0.063 13.1 1.1 0.18 11.7 0.1 2.4 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat MDM10 PF12519.8 NODE_61681_length_265_cov_1.517391_g53741_i0reverse_frame_3 - 1.1 8.1 4.8 1.2 8.0 4.8 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 Dscam_C PF12355.8 NODE_61678_length_265_cov_1.608696_g53738_i0reverse_frame_3 - 0.12 13.3 2.0 0.14 13.1 2.0 1.1 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal Defensin_beta PF00711.19 NODE_61675_length_265_cov_1.713043_g53735_i0reverse_frame_3 - 0.29 11.2 8.7 3.4 7.7 0.2 2.6 2 1 1 3 3 3 0 Beta defensin Mito_fiss_reg PF05308.11 NODE_61672_length_265_cov_1.734783_g53732_i0reverse_frame_3 - 0.42 10.7 6.0 0.45 10.6 6.0 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator Ribosomal_L33 PF00471.20 NODE_61672_length_265_cov_1.734783_g53732_i0forward_frame_2 - 0.41 11.1 3.2 0.6 10.6 3.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L33 Neur_chan_LBD PF02931.23 NODE_61668_length_265_cov_1.795652_g53728_i0reverse_frame_3 - 4.8e-11 42.5 2.4 5.3e-11 42.4 2.4 1.0 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel ligand binding domain KNOX2 PF03791.13 NODE_61667_length_265_cov_1.804348_g53727_i0forward_frame_3 - 0.1 12.1 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 KNOX2 domain MM_CoA_mutase PF01642.22 NODE_61665_length_265_cov_1.834783_g53725_i0reverse_frame_3 - 1.2e-39 136.2 0.2 1.3e-39 136.2 0.2 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase HypA PF01155.19 NODE_61665_length_265_cov_1.834783_g53725_i0reverse_frame_2 - 0.21 11.6 1.9 0.3 11.1 1.9 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Chitin_bind_1 PF00187.19 NODE_61665_length_265_cov_1.834783_g53725_i0forward_frame_3 - 1.4 9.5 13.2 0.37 11.3 6.8 2.4 2 0 0 2 2 2 0 Chitin recognition protein Ploopntkinase2 PF18747.1 NODE_61660_length_265_cov_1.878261_g53720_i0forward_frame_2 - 0.075 12.3 0.0 0.082 12.2 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase2 PH_14 PF17787.1 NODE_61658_length_265_cov_1.908696_g53718_i0forward_frame_2 - 0.08 12.8 0.2 0.099 12.5 0.2 1.1 1 0 0 1 1 1 0 PH domain CstA_5TM PF13722.6 NODE_61657_length_265_cov_1.973913_g53717_i0reverse_frame_3 - 0.099 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 5TM C-terminal transporter carbon starvation CstA RIG-I_C PF18119.1 NODE_61656_length_265_cov_1.982609_g53716_i0forward_frame_3 - 0.082 12.9 0.3 0.1 12.6 0.3 1.1 1 0 0 1 1 1 0 RIG-I receptor C-terminal domain Tombus_P19 PF03220.13 NODE_61655_length_265_cov_1.986957_g53715_i0reverse_frame_2 - 0.12 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Tombusvirus P19 core protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks303.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks303.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks303.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks303.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2490 PF10677.9 NODE_61651_length_265_cov_2.086957_g53711_i0reverse_frame_2 - 0.21 11.5 0.1 0.25 11.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2490) SpmSyn_N PF17950.1 NODE_61651_length_265_cov_2.086957_g53711_i0forward_frame_3 - 0.14 12.4 0.7 0.59 10.4 0.1 1.9 1 1 1 2 2 2 0 S-adenosylmethionine decarboxylase N -terminal DNA_pol_B_exo1 PF03104.19 NODE_61648_length_265_cov_2.204348_g53708_i0reverse_frame_3 - 0.0048 16.1 0.0 0.0055 15.9 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain CTC1 PF15489.6 NODE_61647_length_265_cov_2.213043_g53707_i0forward_frame_3 - 0.037 11.5 2.7 0.039 11.5 2.7 1.0 1 0 0 1 1 1 0 CST, telomere maintenance, complex subunit CTC1 DUF2268 PF10026.9 NODE_61644_length_265_cov_2.378261_g53704_i0forward_frame_2 - 0.21 11.2 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Predicted Zn-dependent protease (DUF2268) zf-C2H2 PF00096.26 NODE_61643_length_265_cov_2.426087_g53703_i0reverse_frame_2 - 0.13 12.7 2.8 0.2 12.2 0.1 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_61643_length_265_cov_2.426087_g53703_i0reverse_frame_2 - 0.52 11.3 0.1 0.52 11.3 0.1 3.2 3 1 0 3 3 3 0 C2H2-type zinc finger Aminotran_5 PF00266.19 NODE_61639_length_265_cov_2.504348_g53699_i0forward_frame_2 - 1.6e-28 99.7 0.0 1.7e-28 99.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 NODE_61639_length_265_cov_2.504348_g53699_i0forward_frame_2 - 0.065 12.4 0.0 0.081 12.1 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II TDP43_N PF18694.1 NODE_61639_length_265_cov_2.504348_g53699_i0forward_frame_2 - 0.15 11.9 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Transactive response DNA-binding protein N-terminal domain Flexi_CP_N PF08358.10 NODE_61635_length_265_cov_2.600000_g53695_i0forward_frame_2 - 0.026 14.5 0.3 1.8 8.6 0.2 2.1 2 0 0 2 2 2 0 Carlavirus coat MatE PF01554.18 NODE_61631_length_265_cov_2.621739_g53691_i0reverse_frame_3 - 3.7e-07 29.9 3.3 3.9e-07 29.9 3.3 1.0 1 0 0 1 1 1 1 MatE BRCC36_C PF18110.1 NODE_61631_length_265_cov_2.621739_g53691_i0reverse_frame_2 - 0.095 12.9 0.3 0.12 12.6 0.3 1.2 1 0 0 1 1 1 0 BRCC36 C-terminal helical domain PGDH_C PF16896.5 NODE_61630_length_265_cov_2.673913_g53690_i0forward_frame_3 - 0.014 15.4 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 Phosphogluconate dehydrogenase (decarboxylating) C-term DUF3847 PF12958.7 NODE_61630_length_265_cov_2.673913_g53690_i0forward_frame_3 - 0.024 14.8 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3847) FlgM PF04316.13 NODE_61629_length_265_cov_2.691304_g53689_i0reverse_frame_2 - 0.0056 17.0 0.5 0.0098 16.2 0.3 1.5 1 1 0 1 1 1 1 Anti-sigma-28 factor, FlgM HEAT_2 PF13646.6 NODE_61629_length_265_cov_2.691304_g53689_i0reverse_frame_2 - 0.014 15.8 0.9 0.02 15.3 0.9 1.2 1 0 0 1 1 1 0 HEAT repeats SpvB PF03534.13 NODE_61629_length_265_cov_2.691304_g53689_i0reverse_frame_2 - 0.22 10.7 0.0 0.25 10.5 0.0 1.0 1 0 0 1 1 1 0 Salmonella virulence plasmid 65kDa B protein FLYWCH_u PF16662.5 NODE_61627_length_265_cov_2.717391_g53687_i0forward_frame_3 - 0.019 15.0 0.2 4.7 7.3 0.0 2.4 2 0 0 2 2 2 0 FLYWCH-type zinc finger-containing protein 1 SpdB PF05122.13 NODE_61626_length_265_cov_2.808696_g53686_i0reverse_frame_3 - 0.13 12.4 4.4 2.1 8.6 2.2 2.3 2 0 0 2 2 2 0 Mobile element transfer protein Baculo_11_kDa PF06143.11 NODE_61625_length_265_cov_2.904348_g53685_i0forward_frame_2 - 0.03 13.9 2.8 0.037 13.6 2.8 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family TCR PF03638.15 NODE_61624_length_265_cov_2.908696_g53684_i0forward_frame_3 - 6.6e-12 45.5 29.6 1.2e-11 44.7 29.6 1.4 1 0 0 1 1 1 1 Tesmin/TSO1-like CXC domain, cysteine-rich domain MSL2-CXC PF16682.5 NODE_61624_length_265_cov_2.908696_g53684_i0forward_frame_3 - 0.14 12.3 26.2 0.5 10.5 26.3 1.9 1 1 0 1 1 1 0 CXC domain of E3 ubiquitin-protein ligase MSL2 MRP-L47 PF06984.13 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_3 - 0.031 14.4 1.1 0.045 13.9 1.1 1.4 1 1 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) NAD_binding_10 PF13460.6 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_2 - 1.2e-05 25.3 0.0 1.4e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_2 - 0.003 16.6 0.0 0.003 16.6 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_2 - 0.0093 15.5 0.0 0.0093 15.5 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 NODE_61623_length_265_cov_3.165217_g53683_i0reverse_frame_2 - 0.011 15.3 0.0 0.012 15.2 0.0 1.1 1 0 0 1 1 1 0 NmrA-like family Rubi_NSP_C PF12601.8 NODE_61622_length_265_cov_3.291304_g53682_i0forward_frame_3 - 0.14 12.3 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Rubivirus non-structural protein Sterol_MT_C PF08498.10 NODE_61621_length_265_cov_3.421739_g53681_i0reverse_frame_3 - 0.036 14.4 0.1 0.047 14.0 0.1 1.2 1 0 0 1 1 1 0 Sterol methyltransferase C-terminal RNA_pol_L_2 PF13656.6 NODE_61619_length_265_cov_3.991304_g53679_i0reverse_frame_3 - 1e-17 63.6 0.0 1.5e-17 63.1 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 NODE_61619_length_265_cov_3.991304_g53679_i0reverse_frame_3 - 0.00054 19.3 0.0 0.00065 19.1 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Nuc_recep-AF1 PF11825.8 NODE_61616_length_265_cov_4.513043_g53676_i0reverse_frame_3 - 0.073 13.1 0.0 0.087 12.9 0.0 1.2 1 0 0 1 1 1 0 Nuclear/hormone receptor activator site AF-1 DOPA_dioxygen PF08883.11 NODE_61616_length_265_cov_4.513043_g53676_i0reverse_frame_2 - 0.033 14.4 0.1 0.043 14.0 0.1 1.2 1 0 0 1 1 1 0 Dopa 4,5-dioxygenase family PetL PF05115.14 NODE_61616_length_265_cov_4.513043_g53676_i0forward_frame_2 - 0.17 11.9 0.6 0.27 11.3 0.6 1.2 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) AAA_lid_4 PF17864.1 NODE_61614_length_265_cov_5.526087_g53674_i0reverse_frame_2 - 0.028 14.2 0.1 0.04 13.7 0.1 1.3 1 0 0 1 1 1 0 RuvB AAA lid domain DUF809 PF05663.11 NODE_61614_length_265_cov_5.526087_g53674_i0forward_frame_3 - 0.49 10.5 1.9 0.64 10.2 1.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF809) DUF3796 PF12676.7 NODE_61607_length_265_cov_38.134783_g53667_i0forward_frame_2 - 0.13 12.7 6.0 0.15 12.5 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) zf_CCCH_4 PF18345.1 NODE_61605_length_265_cov_39.056522_g53665_i0reverse_frame_3 - 0.0021 18.1 0.7 1 9.5 0.2 2.5 2 0 0 2 2 2 2 Zinc finger domain Metallophos PF00149.28 NODE_61600_length_265_cov_50.034783_g53660_i0reverse_frame_2 - 0.003 18.1 0.1 0.0031 18.0 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF809 PF05663.11 NODE_61600_length_265_cov_50.034783_g53660_i0forward_frame_3 - 9.7 6.3 7.5 11 6.1 7.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) SR-25 PF10500.9 NODE_61598_length_265_cov_52.973913_g53658_i0forward_frame_2 - 0.032 13.9 7.7 0.032 13.8 7.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein FANCI_S3 PF14677.6 NODE_61593_length_265_cov_68.782609_g53653_i0reverse_frame_2 - 0.066 12.9 0.0 0.086 12.5 0.0 1.2 1 0 0 1 1 1 0 FANCI solenoid 3 Herpes_UL73 PF03554.13 NODE_61593_length_265_cov_68.782609_g53653_i0forward_frame_3 - 0.2 11.7 0.0 0.3 11.1 0.0 1.2 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein Ribosomal_L7Ae PF01248.26 NODE_61585_length_265_cov_86.700000_g53645_i0reverse_frame_3 - 3.2e-08 33.2 0.0 3.8e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Thx PF17070.5 NODE_61585_length_265_cov_86.700000_g53645_i0forward_frame_2 - 2.2 8.5 7.5 0.62 10.3 3.8 1.9 1 1 1 2 2 2 0 30S ribosomal protein Thx Arm_3 PF16186.5 NODE_61584_length_265_cov_87.282609_g53644_i0forward_frame_2 - 3.8e-06 26.3 0.0 5.4e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Atypical Arm repeat RE_Bpu10I PF09549.10 NODE_61582_length_265_cov_91.065217_g53642_i0forward_frame_3 - 0.036 13.7 0.0 0.036 13.7 0.0 1.1 1 0 0 1 1 1 0 Bpu10I restriction endonuclease MbtH PF03621.13 NODE_61579_length_265_cov_98.365217_g53639_i0forward_frame_3 - 0.00068 19.0 0.0 0.0012 18.2 0.0 1.4 1 1 0 1 1 1 1 MbtH-like protein Pecanex_C PF05041.15 NODE_61575_length_265_cov_157.221739_g53635_i0forward_frame_3 - 0.11 12.1 0.1 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 Pecanex protein (C-terminus) zf-C2H2_4 PF13894.6 NODE_61574_length_265_cov_193.182609_g53634_i0forward_frame_3 - 0.43 11.5 2.9 2 9.5 0.6 2.8 3 0 0 3 3 3 0 C2H2-type zinc finger Herpes_UL3 PF03369.13 NODE_61568_length_265_cov_392.147826_g53628_i0forward_frame_3 - 0.044 14.3 2.6 0.054 14.0 2.6 1.1 1 0 0 1 1 1 0 Herpesvirus UL3 protein zf-NF-X1 PF01422.17 NODE_61567_length_265_cov_396.926087_g53627_i0forward_frame_3 - 5.1 7.2 8.2 1.2 9.2 3.6 1.9 2 0 0 2 2 2 0 NF-X1 type zinc finger DUF5454 PF17535.2 NODE_61567_length_265_cov_396.926087_g53627_i0forward_frame_2 - 0.095 12.1 0.2 0.098 12.0 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5454) DUF2198 PF09964.9 NODE_61565_length_265_cov_532.282609_g53625_i0reverse_frame_2 - 0.032 14.3 0.0 0.047 13.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2198) Prefoldin PF02996.17 NODE_61564_length_265_cov_537.695652_g53624_i0reverse_frame_2 - 8.9e-12 45.0 0.0 9.9e-12 44.8 0.0 1.1 1 0 0 1 1 1 1 Prefoldin subunit STN1_2 PF09170.10 NODE_61564_length_265_cov_537.695652_g53624_i0reverse_frame_2 - 0.056 13.7 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 DUF918 PF06033.11 NODE_61564_length_265_cov_537.695652_g53624_i0forward_frame_2 - 0.027 14.5 0.0 0.033 14.2 0.0 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF918) XPB_DRD PF18458.1 NODE_61562_length_265_cov_24099.817391_g53622_i0forward_frame_3 - 0.18 11.7 0.1 0.25 11.2 0.1 1.3 1 0 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain DUF3482 PF11981.8 NODE_61562_length_265_cov_24099.817391_g53622_i0forward_frame_2 - 0.32 10.4 11.5 0.24 10.8 10.4 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3482) Cytochrom_B558a PF05038.13 NODE_61553_length_266_cov_1.090909_g53613_i0reverse_frame_2 - 0.036 13.6 0.0 0.067 12.8 0.0 1.4 1 1 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit MRP-S24 PF14955.6 NODE_61553_length_266_cov_1.090909_g53613_i0reverse_frame_2 - 0.08 12.9 0.1 0.093 12.7 0.1 1.3 1 1 0 1 1 1 0 Mitochondrial ribosome subunit S24 BATS PF06968.13 NODE_61547_length_266_cov_1.290043_g53607_i0forward_frame_2 - 0.11 12.6 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Biotin and Thiamin Synthesis associated domain cEGF PF12662.7 NODE_61545_length_266_cov_1.333333_g53605_i0reverse_frame_3 - 0.42 10.6 3.0 9.8 6.2 1.2 2.7 2 0 0 2 2 2 0 Complement Clr-like EGF-like RAG2_PHD PF13341.6 NODE_61542_length_266_cov_1.385281_g53602_i0reverse_frame_3 - 0.12 12.5 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 RAG2 PHD domain Lamprin PF06403.11 NODE_61542_length_266_cov_1.385281_g53602_i0forward_frame_3 - 1.9 8.5 6.1 7.2 6.6 0.3 2.0 1 1 1 2 2 2 0 Lamprin DUF2797 PF10977.8 NODE_61541_length_266_cov_1.385281_g53601_i0forward_frame_2 - 1.9 8.3 5.4 2.1 8.2 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) DUF285 PF03382.14 NODE_61539_length_266_cov_1.393939_g53599_i0forward_frame_3 - 0.082 12.7 0.0 0.099 12.4 0.0 1.2 1 0 0 1 1 1 0 Mycoplasma protein of unknown function, DUF285 DUF5374 PF17344.2 NODE_61537_length_266_cov_1.428571_g53597_i0reverse_frame_2 - 0.0094 15.8 0.5 0.037 13.9 0.1 2.0 1 1 1 2 2 2 1 Family of unknown function (DUF5374) C5-epim_C PF06662.13 NODE_61537_length_266_cov_1.428571_g53597_i0reverse_frame_2 - 0.013 15.1 0.4 0.013 15.0 0.4 1.1 1 0 0 1 1 1 0 D-glucuronyl C5-epimerase C-terminus Nup188 PF10487.9 NODE_61536_length_266_cov_1.428571_g53596_i0forward_frame_3 - 0.21 9.5 0.5 0.23 9.3 0.5 1.0 1 0 0 1 1 1 0 Nucleoporin subcomplex protein binding to Pom34 Methyltransf_19 PF04672.12 NODE_61532_length_266_cov_1.515152_g53592_i0reverse_frame_2 - 0.092 12.2 0.0 0.094 12.2 0.0 1.2 1 0 0 1 1 1 0 S-adenosyl methyltransferase DUF3446 PF11928.8 NODE_61532_length_266_cov_1.515152_g53592_i0forward_frame_3 - 0.11 12.8 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Early growth response N-terminal domain Croc_4 PF17691.1 NODE_61531_length_266_cov_1.528139_g53591_i0forward_frame_3 - 0.04 14.0 0.5 0.04 13.9 0.5 1.2 1 0 0 1 1 1 0 Contingent replication of cDNA 4 FeS PF04060.13 NODE_61531_length_266_cov_1.528139_g53591_i0forward_frame_3 - 0.067 12.9 0.9 0.15 11.7 0.9 1.6 1 0 0 1 1 1 0 Putative Fe-S cluster DAO PF01266.24 NODE_61529_length_266_cov_1.558442_g53589_i0reverse_frame_2 - 0.00065 19.4 0.5 0.00094 18.9 0.5 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 NODE_61529_length_266_cov_1.558442_g53589_i0reverse_frame_2 - 0.013 14.8 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_61529_length_266_cov_1.558442_g53589_i0reverse_frame_2 - 0.047 14.3 0.4 0.077 13.6 0.4 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 NODE_61529_length_266_cov_1.558442_g53589_i0reverse_frame_2 - 0.13 11.5 0.1 0.16 11.2 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain Luciferase_3H PF10284.9 NODE_61527_length_266_cov_1.610390_g53587_i0forward_frame_2 - 0.029 14.5 0.1 0.041 14.0 0.1 1.3 1 0 0 1 1 1 0 Luciferase helical bundle domain Exo_endo_phos_2 PF14529.6 NODE_61519_length_266_cov_1.731602_g53579_i0reverse_frame_2 - 0.014 15.2 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Exo_endo_phos PF03372.23 NODE_61519_length_266_cov_1.731602_g53579_i0reverse_frame_2 - 0.051 13.1 0.0 0.051 13.1 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Pannexin_like PF12534.8 NODE_61518_length_266_cov_1.731602_g53578_i0reverse_frame_3 - 0.0045 16.1 2.8 0.0051 16.0 2.8 1.1 1 0 0 1 1 1 1 Pannexin-like TM region of LRRC8 Kelch_4 PF13418.6 NODE_61517_length_266_cov_1.748918_g53577_i0forward_frame_2 - 0.13 12.3 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain DpnI_C PF17726.1 NODE_61515_length_266_cov_1.774892_g53575_i0reverse_frame_2 - 0.063 13.4 0.1 0.1 12.7 0.1 1.4 1 0 0 1 1 1 0 Dam-replacing HTH domain TMPIT PF07851.13 NODE_61515_length_266_cov_1.774892_g53575_i0reverse_frame_2 - 0.1 11.8 0.7 0.11 11.7 0.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein RNase_H PF00075.24 NODE_61512_length_266_cov_1.848485_g53572_i0reverse_frame_2 - 0.25 11.5 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 RNase H Fels1 PF05666.11 NODE_61512_length_266_cov_1.848485_g53572_i0forward_frame_3 - 0.081 12.6 0.7 0.11 12.1 0.1 1.6 2 0 0 2 2 2 0 Fels-1 Prophage Protein-like Haemocyan_bet_s PF14830.6 NODE_61512_length_266_cov_1.848485_g53572_i0forward_frame_2 - 0.084 12.9 0.0 0.084 12.9 0.0 1.2 1 0 0 1 1 1 0 Haemocyanin beta-sandwich PigN PF04987.14 NODE_61510_length_266_cov_1.904762_g53570_i0reverse_frame_3 - 0.06 12.2 0.3 0.07 12.0 0.3 1.1 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) SHQ1 PF04925.15 NODE_61510_length_266_cov_1.904762_g53570_i0reverse_frame_2 - 0.038 13.6 3.4 0.043 13.4 3.4 1.1 1 0 0 1 1 1 0 SHQ1 protein zf-C3HC4_4 PF15227.6 NODE_61509_length_266_cov_1.913420_g53569_i0forward_frame_2 - 0.0044 17.2 2.7 0.008 16.3 2.7 1.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING XPA_C PF05181.12 NODE_61507_length_266_cov_1.956710_g53567_i0forward_frame_2 - 0.009 16.0 1.4 0.012 15.6 0.7 1.7 1 1 0 1 1 1 1 XPA protein C-terminus DHO_dh PF01180.21 NODE_61505_length_266_cov_2.012987_g53565_i0reverse_frame_3 - 1.5e-14 53.9 0.0 1.6e-14 53.9 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase DAHP_synth_2 PF01474.16 NODE_61505_length_266_cov_2.012987_g53565_i0reverse_frame_3 - 0.072 11.6 0.0 0.078 11.5 0.0 1.1 1 0 0 1 1 1 0 Class-II DAHP synthetase family COOH-NH2_lig PF14395.6 NODE_61505_length_266_cov_2.012987_g53565_i0forward_frame_3 - 0.076 12.2 0.0 0.088 12.0 0.0 1.1 1 0 0 1 1 1 0 Phage phiEco32-like COOH.NH2 ligase-type 2 HAP2-GCS1 PF10699.9 NODE_61499_length_266_cov_2.199134_g53559_i0reverse_frame_3 - 0.039 13.9 0.2 0.053 13.5 0.2 1.2 1 0 0 1 1 1 0 Male gamete fusion factor HERV-K_REC PF15695.5 NODE_61499_length_266_cov_2.199134_g53559_i0forward_frame_3 - 0.99 9.5 3.9 0.4 10.8 0.7 1.9 2 1 0 2 2 2 0 Rec (regulator of expression encoded by corf) of HERV-K-113 ABC_tran PF00005.27 NODE_61497_length_266_cov_2.216450_g53557_i0forward_frame_3 - 4.8e-09 36.8 0.0 5.5e-09 36.6 0.0 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_61497_length_266_cov_2.216450_g53557_i0forward_frame_3 - 0.055 13.3 0.0 0.055 13.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system Response_reg PF00072.24 NODE_61496_length_266_cov_2.220779_g53556_i0reverse_frame_2 - 3.2e-18 65.9 0.0 3.5e-18 65.8 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Abhydrolase_1 PF00561.20 NODE_61495_length_266_cov_2.242424_g53555_i0reverse_frame_2 - 9.4e-05 22.2 0.0 0.00011 21.9 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold RRN9 PF10680.9 NODE_61490_length_266_cov_2.290043_g53550_i0reverse_frame_3 - 0.14 12.5 3.1 0.12 12.7 2.2 1.5 1 1 0 1 1 1 0 RNA polymerase I specific transcription initiation factor Med3 PF11593.8 NODE_61490_length_266_cov_2.290043_g53550_i0reverse_frame_3 - 0.75 8.9 4.3 0.67 9.1 4.3 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal TetR_C_20 PF17925.1 NODE_61490_length_266_cov_2.290043_g53550_i0reverse_frame_2 - 0.13 12.6 0.2 0.17 12.2 0.2 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain CEND1 PF15677.5 NODE_61489_length_266_cov_2.294372_g53549_i0forward_frame_2 - 0.042 14.4 0.2 0.05 14.1 0.2 1.1 1 0 0 1 1 1 0 Cell cycle exit and neuronal differentiation protein 1 LpoB PF13036.6 NODE_61482_length_266_cov_2.428571_g53542_i0reverse_frame_3 - 0.00021 21.3 0.0 0.00024 21.1 0.0 1.1 1 0 0 1 1 1 1 Peptidoglycan-synthase activator LpoB RRN9 PF10680.9 NODE_61481_length_266_cov_2.445887_g53541_i0reverse_frame_2 - 0.16 12.2 0.3 0.24 11.7 0.3 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor DUF1293 PF06950.11 NODE_61480_length_266_cov_2.480519_g53540_i0reverse_frame_2 - 0.2 11.8 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1293) CarbpepA_inh PF02977.15 NODE_61479_length_266_cov_2.536797_g53539_i0reverse_frame_2 - 0.032 14.0 0.0 0.29 11.0 0.0 2.0 1 1 0 1 1 1 0 Carboxypeptidase A inhibitor zf-rbx1 PF12678.7 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 1.1e-06 28.7 6.3 1.8e-06 28.1 6.3 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 2.5e-06 27.7 6.7 3.6e-06 27.2 6.7 1.3 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 0.001 19.1 1.9 0.0014 18.7 1.9 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 0.0036 17.1 4.4 0.0055 16.5 4.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 0.015 15.1 5.4 0.025 14.4 5.4 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 0.024 14.5 4.4 0.042 13.7 4.4 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 0.08 12.8 6.6 0.14 12.0 6.6 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf_UBZ PF18439.1 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 0.13 11.9 0.3 0.13 11.9 0.3 2.2 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-RING_11 PF17123.5 NODE_61477_length_266_cov_2.627706_g53537_i0forward_frame_3 - 0.21 11.4 6.0 0.4 10.5 2.3 2.3 2 0 0 2 2 2 0 RING-like zinc finger GP67 PF17634.2 NODE_61476_length_266_cov_2.640693_g53536_i0forward_frame_3 - 0.0031 17.9 7.3 0.0042 17.5 7.3 1.3 1 1 0 1 1 1 1 Gene product 67 Flag1_repress PF03614.13 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_2 - 0.0017 18.2 0.5 0.002 18.0 0.5 1.0 1 0 0 1 1 1 1 Repressor of phase-1 flagellin Herpes_U34 PF04541.13 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_2 - 0.027 13.8 0.3 0.029 13.6 0.3 1.1 1 0 0 1 1 1 0 Herpesvirus virion protein U34 Zf_RING PF16744.5 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_2 - 0.031 14.4 1.2 0.047 13.8 1.2 1.3 1 0 0 1 1 1 0 KIAA1045 RING finger VP9 PF09625.10 NODE_61472_length_266_cov_2.831169_g53532_i0reverse_frame_2 - 0.036 14.2 0.2 0.054 13.7 0.2 1.5 1 1 0 1 1 1 0 VP9 protein Glyco_H_20C_C PF18088.1 NODE_61471_length_266_cov_2.857143_g53531_i0reverse_frame_2 - 0.082 12.8 1.0 0.077 12.8 1.0 1.3 1 1 0 1 1 1 0 Glycoside Hydrolase 20C C-terminal domain MR_MLE_C PF13378.6 NODE_61470_length_266_cov_2.891775_g53530_i0forward_frame_3 - 3.6e-10 39.8 0.0 3.8e-10 39.7 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 NODE_61470_length_266_cov_2.891775_g53530_i0forward_frame_3 - 0.0083 15.3 0.0 0.0083 15.3 0.0 1.0 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus zf-C2H2_7 PF15269.6 NODE_61469_length_266_cov_2.904762_g53529_i0reverse_frame_2 - 0.033 14.3 0.0 0.069 13.2 0.0 1.6 1 0 0 1 1 1 0 Zinc-finger YajC PF02699.15 NODE_61469_length_266_cov_2.904762_g53529_i0forward_frame_3 - 3.4e-09 36.5 0.6 3.4e-09 36.5 0.6 1.6 2 0 0 2 2 2 1 Preprotein translocase subunit SecD-TM1 PF13721.6 NODE_61469_length_266_cov_2.904762_g53529_i0forward_frame_3 - 3.8e-06 27.3 3.0 3.4e-05 24.3 2.4 2.0 2 0 0 2 2 2 1 SecD export protein N-terminal TM region MreC PF04085.14 NODE_61469_length_266_cov_2.904762_g53529_i0forward_frame_3 - 0.012 15.5 0.2 0.015 15.2 0.2 1.3 1 1 0 1 1 1 0 rod shape-determining protein MreC DUF2688 PF10892.8 NODE_61467_length_266_cov_3.155844_g53527_i0forward_frame_3 - 0.045 13.2 0.4 0.085 12.3 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) PapD-like PF14874.6 NODE_61462_length_266_cov_3.939394_g53522_i0forward_frame_3 - 0.16 12.2 0.1 0.19 11.9 0.1 1.3 1 0 0 1 1 1 0 Flagellar-associated PapD-like KASH PF10541.9 NODE_61461_length_266_cov_4.203463_g53521_i0reverse_frame_3 - 0.54 10.6 5.7 0.11 12.8 2.0 1.8 1 1 1 2 2 2 0 Nuclear envelope localisation domain DUF948 PF06103.11 NODE_61461_length_266_cov_4.203463_g53521_i0reverse_frame_3 - 5.5 7.3 5.2 2.9 8.2 0.2 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) GerA PF03323.13 NODE_61461_length_266_cov_4.203463_g53521_i0reverse_frame_2 - 2.4 6.5 5.3 2.6 6.4 5.3 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein DUF365 PF04033.12 NODE_61461_length_266_cov_4.203463_g53521_i0forward_frame_2 - 0.029 14.6 1.4 0.033 14.4 1.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF365) DUF1797 PF08796.10 NODE_61460_length_266_cov_4.580087_g53520_i0reverse_frame_2 - 2.1 8.5 6.2 4.4 7.4 0.4 3.0 2 1 2 4 4 4 0 Protein of unknown function (DUF1797) TRAM_LAG1_CLN8 PF03798.16 NODE_61458_length_266_cov_11.744589_g53518_i0reverse_frame_3 - 0.011 15.5 0.6 0.011 15.5 0.6 1.1 1 0 0 1 1 1 0 TLC domain Chitin_synth_2 PF03142.15 NODE_61456_length_266_cov_18.995671_g53516_i0forward_frame_3 - 4.7e-05 22.2 0.0 4.8e-05 22.2 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 NODE_61456_length_266_cov_18.995671_g53516_i0forward_frame_3 - 0.00049 20.1 0.0 0.0005 20.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 NODE_61456_length_266_cov_18.995671_g53516_i0forward_frame_3 - 0.0011 19.0 0.0 0.0013 18.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 HTH_16 PF12645.7 NODE_61455_length_266_cov_33.705628_g53515_i0reverse_frame_2 - 0.11 12.6 0.0 0.33 11.0 0.0 1.8 1 1 1 2 2 2 0 Helix-turn-helix domain Antimicrobial_5 PF08026.11 NODE_61453_length_266_cov_34.995671_g53513_i0forward_frame_2 - 0.028 14.5 0.9 0.051 13.7 0.9 1.4 1 0 0 1 1 1 0 Bee antimicrobial peptide DUF5400 PF17379.2 NODE_61452_length_266_cov_37.393939_g53512_i0forward_frame_2 - 0.0046 17.4 1.3 0.0057 17.1 0.5 1.5 1 1 1 2 2 2 1 Family of unknown function (DUF5400) Hanta_nucleocap PF00846.18 NODE_61451_length_266_cov_37.658009_g53511_i0reverse_frame_3 - 0.025 13.0 0.5 0.027 12.9 0.5 1.1 1 0 0 1 1 1 0 Hantavirus nucleocapsid protein ANTH PF07651.16 NODE_61446_length_266_cov_48.333333_g53506_i0reverse_frame_3 - 0.087 11.8 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 ANTH domain C2 PF00168.30 NODE_61446_length_266_cov_48.333333_g53506_i0reverse_frame_2 - 0.19 12.1 0.3 0.46 10.8 0.4 1.4 1 1 1 2 2 2 0 C2 domain O-ag_pol_Wzy PF14296.6 NODE_61439_length_266_cov_57.826840_g53499_i0reverse_frame_3 - 0.19 10.3 11.0 0.2 10.3 11.0 1.1 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy Sulfate_transp PF00916.20 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 1.9e-23 82.9 4.7 2.1e-23 82.7 4.7 1.0 1 0 0 1 1 1 1 Sulfate permease family Xan_ur_permease PF00860.20 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 4.7e-05 22.3 7.0 5.3e-05 22.1 7.0 1.0 1 0 0 1 1 1 1 Permease family DUF4010 PF13194.6 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 0.0054 16.4 5.0 0.0064 16.2 5.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4010) MFS_MOT1 PF16983.5 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 0.031 14.7 3.9 0.035 14.5 3.9 1.1 1 0 0 1 1 1 0 Molybdate transporter of MFS superfamily Adeno_GP19K PF04881.13 NODE_61428_length_266_cov_69.069264_g53488_i0reverse_frame_2 - 0.074 13.0 0.1 0.078 13.0 0.1 1.2 1 0 0 1 1 1 0 Adenovirus GP19K CCDC106 PF15794.5 NODE_61426_length_266_cov_73.640693_g53486_i0reverse_frame_2 - 0.28 10.9 3.5 0.29 10.8 3.5 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Atrophin-1 PF03154.15 NODE_61426_length_266_cov_73.640693_g53486_i0reverse_frame_2 - 1.2 7.3 4.3 1.5 7.0 4.3 1.0 1 0 0 1 1 1 0 Atrophin-1 family Nop10p PF04135.12 NODE_61424_length_266_cov_76.818182_g53484_i0reverse_frame_3 - 0.25 11.4 1.8 0.34 11.0 0.7 1.7 1 1 1 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family ATXN-1_C PF12547.8 NODE_61424_length_266_cov_76.818182_g53484_i0forward_frame_3 - 0.035 14.4 0.1 0.23 11.8 0.0 2.0 2 0 0 2 2 2 0 Capicua transcriptional repressor modulator NYAP_C PF15452.6 NODE_61423_length_266_cov_78.090909_g53483_i0forward_frame_3 - 0.034 14.0 0.5 0.037 13.9 0.5 1.0 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter DUF2321 PF10083.9 NODE_61419_length_266_cov_88.675325_g53479_i0reverse_frame_3 - 0.025 14.2 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) Herpes_LAMP2 PF06126.11 NODE_61416_length_266_cov_91.982684_g53476_i0reverse_frame_2 - 0.031 12.9 0.2 0.032 12.9 0.2 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 UPF0524 PF15823.5 NODE_61413_length_266_cov_100.601732_g53473_i0forward_frame_3 - 0.43 9.9 3.1 0.45 9.9 3.1 1.1 1 0 0 1 1 1 0 UPF0524 of C3orf70 DUF4717 PF15838.5 NODE_61413_length_266_cov_100.601732_g53473_i0forward_frame_2 - 0.23 11.5 1.4 0.32 11.0 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4717) EAGR_box PF16713.5 NODE_61412_length_266_cov_102.064935_g53472_i0reverse_frame_3 - 0.16 11.7 0.9 13 5.5 0.0 2.2 2 0 0 2 2 2 0 Enriched in aromatic and glycine Residues box ALS2CR11 PF15729.5 NODE_61411_length_266_cov_102.359307_g53471_i0forward_frame_2 - 0.22 10.6 0.0 0.24 10.5 0.0 1.0 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 candidate 11 Tmem26 PF09772.9 NODE_61409_length_266_cov_106.086580_g53469_i0reverse_frame_2 - 0.21 10.9 0.0 0.22 10.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 26 VBS PF08913.10 NODE_61408_length_266_cov_120.316017_g53468_i0reverse_frame_3 - 0.027 14.9 0.1 0.031 14.7 0.1 1.1 1 0 0 1 1 1 0 Vinculin Binding Site Syntaxin-6_N PF09177.11 NODE_61408_length_266_cov_120.316017_g53468_i0reverse_frame_3 - 0.043 14.4 0.2 0.049 14.2 0.2 1.2 1 0 0 1 1 1 0 Syntaxin 6, N-terminal Rad60-SLD PF11976.8 NODE_61405_length_266_cov_147.008658_g53465_i0forward_frame_3 - 0.027 14.3 0.0 0.035 13.9 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ion_trans_N PF08412.10 NODE_61405_length_266_cov_147.008658_g53465_i0forward_frame_3 - 0.14 11.8 0.0 0.29 10.8 0.0 1.5 1 0 0 1 1 1 0 Ion transport protein N-terminal EcoRII-N PF09217.10 NODE_61400_length_266_cov_172.437229_g53460_i0forward_frame_2 - 0.11 12.2 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease EcoRII, N-terminal PAP1 PF08601.10 NODE_61394_length_266_cov_267.077922_g53454_i0reverse_frame_2 - 0.023 14.4 1.9 0.02 14.6 1.9 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 RBP_receptor PF14752.6 NODE_61387_length_266_cov_636.064935_g53447_i0forward_frame_2 - 0.16 10.6 0.9 0.19 10.3 0.9 1.0 1 0 0 1 1 1 0 Retinol binding protein receptor Ribosomal_S3Ae PF01015.18 NODE_61384_length_266_cov_832.562771_g53444_i0reverse_frame_2 - 5.7e-05 22.8 0.0 8.2e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal S3Ae family Chloroa_b-bind PF00504.21 NODE_61380_length_266_cov_2298.476190_g53440_i0reverse_frame_3 - 3.8e-08 34.0 0.0 3.8e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Chlorophyll A-B binding protein AXE1 PF05448.12 NODE_61380_length_266_cov_2298.476190_g53440_i0forward_frame_2 - 0.11 11.2 0.1 0.13 10.9 0.1 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Corona_NS2 PF04753.12 NODE_61378_length_266_cov_7097.112554_g53438_i0reverse_frame_2 - 0.042 14.4 0.4 0.053 14.1 0.4 1.2 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 HA PF03457.14 NODE_61378_length_266_cov_7097.112554_g53438_i0reverse_frame_2 - 0.19 12.1 0.3 0.24 11.8 0.3 1.2 1 0 0 1 1 1 0 Helicase associated domain NAD-GH PF10712.9 NODE_61378_length_266_cov_7097.112554_g53438_i0forward_frame_3 - 2.6e-12 46.0 8.9 3e-12 45.8 8.9 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase NAD-GH PF10712.9 NODE_61377_length_266_cov_10132.147186_g53437_i0forward_frame_3 - 8.6e-13 47.6 9.1 9.7e-13 47.4 9.1 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase TPR_12 PF13424.6 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 3e-07 30.6 0.3 4.1e-07 30.2 0.3 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.00012 21.8 0.4 0.52 10.3 0.4 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.0008 19.6 0.1 0.00088 19.4 0.1 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 UPF0254 PF06787.11 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.0024 17.7 0.1 0.0032 17.2 0.1 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0254) DUF1666 PF07891.12 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.014 15.1 0.3 0.014 15.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1666) TPR_19 PF14559.6 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.049 14.1 0.1 0.067 13.7 0.1 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.11 13.2 1.6 0.52 11.1 0.7 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_61373_length_266_cov_83308.861472_g53433_i0forward_frame_3 - 0.11 12.3 2.4 0.6 10.0 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF3409 PF11889.8 NODE_61370_length_267_cov_0.956897_g53430_i0reverse_frame_3 - 0.12 12.4 0.5 0.12 12.4 0.5 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3409) BatA PF07584.11 NODE_61369_length_267_cov_0.974138_g53429_i0forward_frame_2 - 0.069 13.5 1.1 0.085 13.2 1.1 1.2 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal WD40 PF00400.32 NODE_61366_length_267_cov_1.077586_g53426_i0reverse_frame_3 - 0.054 14.4 0.0 0.76 10.7 0.0 2.0 2 0 0 2 2 2 0 WD domain, G-beta repeat DUF3641 PF12345.8 NODE_61365_length_267_cov_1.150862_g53425_i0reverse_frame_3 - 0.016 15.2 0.3 0.023 14.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3641) PocR PF10114.9 NODE_61364_length_267_cov_1.168103_g53424_i0forward_frame_2 - 0.33 10.7 2.0 0.33 10.7 2.0 1.1 1 0 0 1 1 1 0 Sensory domain found in PocR DUF2650 PF10853.8 NODE_61361_length_267_cov_1.293103_g53421_i0reverse_frame_2 - 0.15 11.8 0.5 0.15 11.8 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2650) Cadherin_C_2 PF16492.5 NODE_61361_length_267_cov_1.293103_g53421_i0forward_frame_2 - 0.06 14.1 4.5 0.08 13.7 4.5 1.3 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal V_ATPase_I PF01496.19 NODE_61361_length_267_cov_1.293103_g53421_i0forward_frame_2 - 2.2 6.1 8.2 2.4 6.0 8.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family LEAP-2 PF07359.11 NODE_61356_length_267_cov_1.383621_g53416_i0forward_frame_2 - 0.23 11.3 6.5 0.34 10.8 6.5 1.2 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) zf-TRM13_CCCH PF11722.8 NODE_61354_length_267_cov_1.452586_g53414_i0reverse_frame_2 - 0.59 9.9 0.2 0.59 9.9 0.2 3.1 3 1 0 3 3 3 0 CCCH zinc finger in TRM13 protein Glyco_hydro_49N PF17433.2 NODE_61353_length_267_cov_1.491379_g53413_i0forward_frame_3 - 0.19 11.4 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 49 N-terminal Ig-like domain BRCT_2 PF16589.5 NODE_61351_length_267_cov_1.508621_g53411_i0reverse_frame_2 - 1.1e-05 25.7 0.0 1.3e-05 25.5 0.0 1.1 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 NODE_61351_length_267_cov_1.508621_g53411_i0reverse_frame_2 - 0.0011 19.4 0.0 0.0012 19.2 0.0 1.1 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain Fijivirus_P9-2 PF06837.11 NODE_61349_length_267_cov_1.564655_g53409_i0forward_frame_3 - 0.093 12.2 0.2 0.11 12.0 0.2 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein WD40 PF00400.32 NODE_61346_length_267_cov_1.689655_g53406_i0forward_frame_3 - 0.012 16.4 0.0 2.8 9.0 0.0 2.2 2 0 0 2 2 2 0 WD domain, G-beta repeat PQQ_3 PF13570.6 NODE_61346_length_267_cov_1.689655_g53406_i0forward_frame_3 - 0.072 13.6 0.0 0.14 12.7 0.0 1.5 1 0 0 1 1 1 0 PQQ-like domain ANAPC4_WD40 PF12894.7 NODE_61346_length_267_cov_1.689655_g53406_i0forward_frame_3 - 0.16 12.3 0.0 2.5 8.5 0.0 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain EamA PF00892.20 NODE_61345_length_267_cov_1.702586_g53405_i0forward_frame_3 - 0.0012 19.0 0.5 0.0014 18.8 0.5 1.2 1 0 0 1 1 1 1 EamA-like transporter family Mem_trans PF03547.18 NODE_61345_length_267_cov_1.702586_g53405_i0forward_frame_3 - 0.038 12.4 0.1 0.044 12.2 0.1 1.0 1 0 0 1 1 1 0 Membrane transport protein Trp_oprn_chp PF09534.10 NODE_61345_length_267_cov_1.702586_g53405_i0forward_frame_3 - 0.071 12.9 0.1 0.1 12.4 0.1 1.2 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF2670 PF10875.8 NODE_61344_length_267_cov_1.706897_g53404_i0reverse_frame_2 - 0.099 12.7 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) cNMP_binding PF00027.29 NODE_61344_length_267_cov_1.706897_g53404_i0forward_frame_2 - 2.6e-06 27.4 0.0 5.7e-06 26.3 0.0 1.6 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain PDDEXK_3 PF13366.6 NODE_61344_length_267_cov_1.706897_g53404_i0forward_frame_2 - 0.022 15.1 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Tsc35 PF15079.6 NODE_61344_length_267_cov_1.706897_g53404_i0forward_frame_2 - 0.047 13.3 0.1 0.051 13.1 0.1 1.1 1 0 0 1 1 1 0 Testis-specific protein 35 PPARgamma_N PF12577.8 NODE_61344_length_267_cov_1.706897_g53404_i0forward_frame_2 - 0.072 13.7 0.0 0.083 13.5 0.0 1.2 1 0 0 1 1 1 0 PPAR gamma N-terminal region MORN PF02493.20 NODE_61342_length_267_cov_1.724138_g53402_i0forward_frame_2 - 6e-18 63.6 14.6 2.9e-08 33.1 0.1 3.4 4 0 0 4 4 4 3 MORN repeat DUF3048_C PF17479.2 NODE_61342_length_267_cov_1.724138_g53402_i0forward_frame_2 - 0.034 14.5 3.0 0.064 13.6 3.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain MORN_2 PF07661.13 NODE_61342_length_267_cov_1.724138_g53402_i0forward_frame_2 - 0.061 13.6 3.0 0.095 13.0 0.9 2.5 2 0 0 2 2 2 0 MORN repeat variant Herpes_LMP1 PF05297.11 NODE_61338_length_267_cov_1.793103_g53398_i0forward_frame_2 - 1.4 8.0 11.7 1.5 8.0 11.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) PCNA_N PF00705.18 NODE_61337_length_267_cov_1.818966_g53397_i0forward_frame_3 - 0.069 12.9 0.2 0.083 12.6 0.2 1.1 1 0 0 1 1 1 0 Proliferating cell nuclear antigen, N-terminal domain RNHCP PF12647.7 NODE_61336_length_267_cov_1.862069_g53396_i0reverse_frame_2 - 0.032 14.2 1.4 0.087 12.8 1.4 1.8 1 1 0 1 1 1 0 RNHCP domain Ribosomal_L37e PF01907.19 NODE_61336_length_267_cov_1.862069_g53396_i0forward_frame_3 - 0.22 11.7 0.1 0.22 11.7 0.1 2.1 2 0 0 2 2 2 0 Ribosomal protein L37e Rubredoxin_2 PF18073.1 NODE_61336_length_267_cov_1.862069_g53396_i0forward_frame_3 - 0.25 11.1 0.4 0.25 11.1 0.4 2.8 4 0 0 4 4 4 0 Rubredoxin metal binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks304.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks304.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks304.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks304.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SRC-1 PF08832.10 NODE_61331_length_267_cov_1.939655_g53391_i0forward_frame_2 - 0.057 14.5 0.3 0.077 14.1 0.3 1.4 1 1 0 1 1 1 0 Steroid receptor coactivator DUF2339 PF10101.9 NODE_61330_length_267_cov_1.943966_g53390_i0forward_frame_3 - 0.0038 15.9 1.0 0.0038 15.9 1.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2339) DUF1634 PF07843.11 NODE_61329_length_267_cov_1.943966_g53389_i0forward_frame_2 - 0.075 13.1 3.4 0.081 13.0 2.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1634) Spc110_C PF18520.1 NODE_61328_length_267_cov_1.948276_g53388_i0reverse_frame_2 - 0.02 14.5 0.7 0.031 13.9 0.3 1.5 1 1 0 1 1 1 0 Spindle pole body component 110 C-terminal domain TMF_DNA_bd PF12329.8 NODE_61328_length_267_cov_1.948276_g53388_i0reverse_frame_2 - 0.036 14.1 4.4 0.049 13.6 4.4 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Peptidase_C92 PF05708.12 NODE_61324_length_267_cov_2.008621_g53384_i0reverse_frame_2 - 0.055 13.6 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Terminase_5 PF06056.12 NODE_61321_length_267_cov_2.017241_g53381_i0reverse_frame_2 - 0.14 12.1 0.1 0.29 11.0 0.1 1.6 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) TMEM52 PF14979.6 NODE_61319_length_267_cov_2.030172_g53379_i0reverse_frame_3 - 0.014 15.3 2.0 0.017 15.0 1.2 1.6 1 1 0 1 1 1 0 Transmembrane 52 PHM7_cyt PF14703.6 NODE_61318_length_267_cov_2.068966_g53378_i0reverse_frame_2 - 0.0034 17.6 0.0 0.0048 17.2 0.0 1.2 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter DUF1247 PF06851.11 NODE_61307_length_267_cov_2.318966_g53367_i0reverse_frame_2 - 0.016 15.2 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) DUF5010 PF16402.5 NODE_61307_length_267_cov_2.318966_g53367_i0forward_frame_3 - 0.11 11.3 0.0 0.13 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5010) Aldedh PF00171.22 NODE_61305_length_267_cov_2.383621_g53365_i0reverse_frame_2 - 2.5e-29 102.1 0.1 2.7e-29 102.0 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Corona_NS1 PF06145.11 NODE_61301_length_267_cov_2.487069_g53361_i0forward_frame_3 - 0.2 11.2 0.0 0.33 10.5 0.0 1.3 1 0 0 1 1 1 0 Coronavirus nonstructural protein NS1 Topoisom_bac PF01131.20 NODE_61301_length_267_cov_2.487069_g53361_i0forward_frame_3 - 0.21 10.5 0.0 0.23 10.4 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase ATP_synt_H PF05493.13 NODE_61301_length_267_cov_2.487069_g53361_i0forward_frame_2 - 0.0027 18.1 1.9 0.0044 17.4 1.9 1.3 1 0 0 1 1 1 1 ATP synthase subunit H Thiolase_C PF02803.18 NODE_61300_length_267_cov_2.487069_g53360_i0reverse_frame_2 - 0.1 12.3 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Thiolase, C-terminal domain TCR PF03638.15 NODE_61299_length_267_cov_2.538793_g53359_i0reverse_frame_3 - 3.7e-08 33.5 16.0 5.1e-08 33.1 16.0 1.2 1 0 0 1 1 1 1 Tesmin/TSO1-like CXC domain, cysteine-rich domain VESA1_N PF12785.7 NODE_61299_length_267_cov_2.538793_g53359_i0reverse_frame_3 - 0.18 10.8 7.7 0.17 10.8 7.7 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Sec16_C PF12931.7 NODE_61296_length_267_cov_2.659483_g53356_i0reverse_frame_2 - 0.017 14.8 0.0 0.019 14.6 0.0 1.0 1 0 0 1 1 1 0 Sec23-binding domain of Sec16 NCU-G1 PF15065.6 NODE_61296_length_267_cov_2.659483_g53356_i0reverse_frame_2 - 0.022 13.8 0.3 0.024 13.7 0.3 1.0 1 0 0 1 1 1 0 Lysosomal transcription factor, NCU-G1 BLM10_mid PF16507.5 NODE_61296_length_267_cov_2.659483_g53356_i0reverse_frame_2 - 0.027 13.1 0.6 0.03 13.0 0.6 1.0 1 0 0 1 1 1 0 Proteasome-substrate-size regulator, mid region DUF5568 PF17724.1 NODE_61292_length_267_cov_2.818966_g53352_i0forward_frame_2 - 0.093 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5568) FSH1 PF03959.13 NODE_61285_length_267_cov_3.573276_g53345_i0reverse_frame_2 - 0.0023 17.6 0.0 0.0028 17.3 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) FSH1 PF03959.13 NODE_61284_length_267_cov_3.573276_g53344_i0reverse_frame_2 - 8.7e-06 25.5 0.0 1.1e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) RNR_N PF08343.10 NODE_61284_length_267_cov_3.573276_g53344_i0reverse_frame_2 - 0.087 12.9 4.9 0.16 12.0 4.9 1.5 1 1 0 1 1 1 0 Ribonucleotide reductase N-terminal AMH_N PF04709.12 NODE_61279_length_267_cov_4.892241_g53339_i0forward_frame_2 - 0.0087 15.0 0.0 0.01 14.8 0.0 1.0 1 0 0 1 1 1 1 Anti-Mullerian hormone, N terminal region VATC PF18716.1 NODE_61277_length_267_cov_5.034483_g53337_i0reverse_frame_2 - 0.036 13.9 0.2 0.036 13.9 0.2 2.1 2 1 0 2 2 2 0 Vms1-associating treble clef domain DUF2830 PF11125.8 NODE_61272_length_267_cov_17.590517_g53332_i0forward_frame_3 - 2.7 8.0 7.1 1.9 8.6 5.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2830) DUF4491 PF14898.6 NODE_61271_length_267_cov_19.870690_g53331_i0forward_frame_2 - 0.75 10.3 6.8 0.92 10.0 6.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) DUF3043 PF11241.8 NODE_61271_length_267_cov_19.870690_g53331_i0forward_frame_2 - 8.1 6.5 5.2 8.9 6.3 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) tify PF06200.14 NODE_61270_length_267_cov_35.728448_g53330_i0reverse_frame_2 - 0.23 10.8 0.0 0.36 10.2 0.0 1.3 1 0 0 1 1 1 0 tify domain Cytochrom_C552 PF02335.15 NODE_61269_length_267_cov_39.918103_g53329_i0reverse_frame_3 - 0.023 13.6 0.5 0.026 13.4 0.5 1.0 1 0 0 1 1 1 0 Cytochrome c552 DUF4649 PF15507.6 NODE_61269_length_267_cov_39.918103_g53329_i0forward_frame_3 - 0.16 11.9 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4649) zf-C2H2_8 PF15909.5 NODE_61267_length_267_cov_51.814655_g53327_i0reverse_frame_2 - 0.044 14.1 3.1 0.054 13.8 2.9 1.3 1 1 0 1 1 1 0 C2H2-type zinc ribbon Viral_Beta_CD PF04530.12 NODE_61265_length_267_cov_55.633621_g53325_i0forward_frame_2 - 0.057 13.7 1.7 0.068 13.5 1.7 1.2 1 0 0 1 1 1 0 Viral Beta C/D like family FeoB_N PF02421.18 NODE_61258_length_267_cov_64.732759_g53318_i0reverse_frame_2 - 0.051 13.1 0.1 0.086 12.4 0.0 1.4 1 1 0 1 1 1 0 Ferrous iron transport protein B DUF5090 PF17009.5 NODE_61257_length_267_cov_66.202586_g53317_i0reverse_frame_2 - 9 6.2 13.0 10 6.0 13.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF1633 PF07794.11 NODE_61254_length_267_cov_68.241379_g53314_i0forward_frame_3 - 0.082 11.1 3.5 0.089 11.0 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) NIP_1 PF08995.10 NODE_61253_length_267_cov_73.262931_g53313_i0forward_frame_3 - 0.068 13.6 1.2 0.084 13.3 1.2 1.2 1 0 0 1 1 1 0 Necrosis inducing protein-1 PIP49_N PF14875.6 NODE_61252_length_267_cov_74.215517_g53312_i0reverse_frame_3 - 0.36 10.7 6.4 0.58 10.0 6.4 1.3 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 DUF5090 PF17009.5 NODE_61250_length_267_cov_79.646552_g53310_i0forward_frame_2 - 1.4 8.9 9.7 1.9 8.4 9.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Apolipo_F PF15148.6 NODE_61248_length_267_cov_81.172414_g53308_i0forward_frame_3 - 0.028 13.9 0.7 0.03 13.8 0.7 1.1 1 0 0 1 1 1 0 Apolipoprotein F Rubredoxin_2 PF18073.1 NODE_61247_length_267_cov_82.060345_g53307_i0reverse_frame_2 - 0.055 13.2 2.4 0.1 12.4 2.4 1.4 1 0 0 1 1 1 0 Rubredoxin metal binding domain Bacillus_HBL PF05791.11 NODE_61234_length_267_cov_135.017241_g53294_i0forward_frame_3 - 0.016 15.0 1.7 0.02 14.7 1.7 1.1 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) Gag_p30 PF02093.16 NODE_61234_length_267_cov_135.017241_g53294_i0forward_frame_3 - 0.054 13.0 0.0 0.062 12.8 0.0 1.1 1 0 0 1 1 1 0 Gag P30 core shell protein zf-CCCH_3 PF15663.5 NODE_61233_length_267_cov_140.534483_g53293_i0reverse_frame_3 - 1.2 9.4 6.1 2.2 8.6 4.4 1.9 1 1 1 2 2 2 0 Zinc-finger containing family Orf78 PF06024.12 NODE_61232_length_267_cov_152.418103_g53292_i0forward_frame_2 - 0.063 13.6 4.3 0.074 13.4 4.3 1.2 1 0 0 1 1 1 0 Orf78 (ac78) SpvB PF03534.13 NODE_61231_length_267_cov_161.461207_g53291_i0reverse_frame_3 - 0.045 12.9 0.0 0.045 12.9 0.0 1.0 1 0 0 1 1 1 0 Salmonella virulence plasmid 65kDa B protein ArfGap PF01412.18 NODE_61231_length_267_cov_161.461207_g53291_i0reverse_frame_3 - 0.097 12.8 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf DUF4118 PF13493.6 NODE_61230_length_267_cov_175.258621_g53290_i0reverse_frame_3 - 0.052 13.3 2.2 0.069 13.0 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) WD40 PF00400.32 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 1.1e-10 41.9 0.3 1.3e-07 32.2 0.1 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 4.4e-05 23.7 0.0 5.6e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 0.0028 17.6 0.0 0.0029 17.5 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 0.0054 16.1 0.0 0.0061 15.9 0.0 1.0 1 0 0 1 1 1 1 WD40-like domain PALB2_WD40 PF16756.5 NODE_61227_length_267_cov_257.663793_g53287_i0reverse_frame_3 - 0.11 11.4 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Partner and localizer of BRCA2 WD40 domain bacHORMA_2 PF18173.1 NODE_61225_length_267_cov_280.474138_g53285_i0forward_frame_2 - 0.2 11.5 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial HORMA domain 2 E_raikovi_mat PF06360.11 NODE_61224_length_267_cov_283.163793_g53284_i0reverse_frame_3 - 0.059 13.8 1.4 0.096 13.1 1.4 1.3 1 0 0 1 1 1 0 Euplotes raikovi mating pheromone GDP_Man_Dehyd PF16363.5 NODE_61218_length_267_cov_1963.956897_g53278_i0forward_frame_2 - 2e-05 24.2 0.0 2.2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_61218_length_267_cov_1963.956897_g53278_i0forward_frame_2 - 0.0007 19.1 0.0 0.00081 18.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family FeoB_Cyto PF17910.1 NODE_61218_length_267_cov_1963.956897_g53278_i0forward_frame_2 - 0.012 16.2 0.0 0.014 15.9 0.0 1.1 1 0 0 1 1 1 0 FeoB cytosolic helical domain NAD_binding_4 PF07993.12 NODE_61218_length_267_cov_1963.956897_g53278_i0forward_frame_2 - 0.14 11.3 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 Male sterility protein Pet191_N PF10203.9 ORF99320 - 1.2e-10 41.5 6.7 1.5e-10 41.2 6.7 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein PET191 CHCH PF06747.13 ORF99320 - 1.7 8.9 13.1 2.5 8.4 1.4 2.7 2 1 1 3 3 3 0 CHCH domain RIF5_SNase_1 PF18187.1 ORF9807 - 0.077 12.7 0.0 0.08 12.7 0.0 1.1 1 0 0 1 1 1 0 TbRIF5 SNase domain 1 YoeB_toxin PF06769.14 ORF97492 - 0.037 14.0 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 YoeB-like toxin of bacterial type II toxin-antitoxin system CAP PF00188.26 ORF97054 - 0.012 16.5 0.0 0.013 16.3 0.0 1.1 1 0 0 1 1 1 0 Cysteine-rich secretory protein family SecIII_SopE_N PF05364.14 ORF9681 - 0.029 14.4 0.8 0.049 13.7 0.6 1.5 1 1 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Fzo_mitofusin PF04799.13 ORF96680 - 0.017 14.7 0.2 0.017 14.7 0.2 1.1 1 0 0 1 1 1 0 fzo-like conserved region CCDC92 PF14916.6 ORF96680 - 0.05 13.4 2.3 0.12 12.1 2.3 1.7 1 1 0 1 1 1 0 Coiled-coil domain of unknown function DUF2264 PF10022.9 ORF96680 - 0.056 12.5 0.1 0.066 12.3 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2264) PEARLI-4 PF05278.12 ORF96680 - 0.11 12.1 2.5 0.12 12.0 2.5 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) DUF4260 PF14079.6 ORF96524 - 0.052 13.5 0.2 0.072 13.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4260) Clr5 PF14420.6 ORF95823 - 0.071 13.4 0.0 0.11 12.7 0.0 1.5 1 1 0 1 1 1 0 Clr5 domain SecIII_SopE_N PF05364.14 ORF95580 - 0.029 14.4 0.8 0.049 13.7 0.6 1.5 1 1 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Herpes_gI PF01688.17 ORF95372 - 0.077 12.9 0.9 0.083 12.8 0.9 1.1 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein I OstA PF03968.14 ORF95362 - 6.6e-11 42.4 0.1 1e-10 41.8 0.1 1.3 1 0 0 1 1 1 1 OstA-like protein PBECR2 PF18810.1 ORF94489 - 0.048 14.0 0.1 0.051 13.9 0.1 1.1 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2 Hepsin-SRCR PF09272.10 ORF9439 - 0.013 16.0 0.0 0.019 15.5 0.0 1.3 1 0 0 1 1 1 0 Hepsin, SRCR domain zf-Tim10_DDP PF02953.15 ORF94045 - 3.1e-07 29.9 0.3 3.3e-07 29.8 0.3 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger SAVED PF18145.1 ORF92932 - 0.14 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 SMODS-associated and fused to various effectors sensor domain GAS2 PF02187.17 ORF92790 - 4.3e-06 26.7 0.5 7.2e-06 26.0 0.1 1.6 1 1 1 2 2 2 1 Growth-Arrest-Specific Protein 2 Domain Adenine_glyco PF03352.13 ORF92790 - 0.0019 18.0 0.1 0.0019 18.0 0.1 1.0 1 0 0 1 1 1 1 Methyladenine glycosylase DUF4710 PF15828.5 ORF92790 - 0.024 14.7 0.1 0.037 14.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DUF4051 PF13260.6 ORF92790 - 0.082 12.6 0.3 0.14 11.9 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) SecIII_SopE_N PF05364.14 ORF92436 - 0.029 14.4 0.8 0.049 13.7 0.6 1.5 1 1 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Putative_PNPOx PF01243.20 ORF92298 - 0.0089 16.2 0.0 0.011 15.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF2610 PF11020.8 ORF91018 - 0.098 12.5 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) CENP-B_N PF04218.13 ORF90775 - 0.022 14.4 0.1 0.056 13.1 0.0 1.7 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain zf_CopZ PF18423.1 ORF90021 - 0.09 12.7 1.7 0.09 12.7 1.7 1.5 2 0 0 2 2 2 0 Zinc binding domain p47_phox_C PF08944.11 ORF89932 - 0.18 11.3 0.3 0.18 11.3 0.3 2.0 2 1 0 2 2 2 0 NADPH oxidase subunit p47Phox, C terminal domain CFEM PF05730.11 ORF89923 - 0.0024 17.9 4.9 0.0032 17.5 4.9 1.3 1 1 0 1 1 1 1 CFEM domain DUF1368 PF07112.11 ORF87887 - 0.021 13.7 6.3 0.022 13.6 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1368) APOBEC1 PF18769.1 ORF87791 - 0.0095 16.2 0.9 0.012 15.8 0.9 1.1 1 0 0 1 1 1 1 APOBEC1 MCR PF18509.1 ORF87684 - 0.17 11.5 0.5 0.17 11.5 0.5 2.9 3 0 0 3 3 3 0 Magnetochrome domain PDCD2_C PF04194.13 ORF87622 - 4.1e-09 36.7 0.3 7.4e-09 35.9 0.0 1.6 2 0 0 2 2 2 1 Programmed cell death protein 2, C-terminal putative domain ribosomal_L24 PF17136.4 ORF86885 - 0.15 12.5 1.3 0.46 10.9 1.3 1.9 1 1 0 1 1 1 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 CC2D2AN-C2 PF15625.6 ORF86129 - 0.013 15.2 0.4 0.017 14.9 0.4 1.2 1 0 0 1 1 1 0 CC2D2A N-terminal C2 domain HsbA PF12296.8 ORF86129 - 0.02 15.3 0.0 0.024 15.1 0.0 1.1 1 0 0 1 1 1 0 Hydrophobic surface binding protein A CRA PF06589.11 ORF86129 - 0.065 13.3 8.8 0.081 13.0 8.8 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) Ribosomal_L18_c PF14204.6 ORF86129 - 0.099 13.6 7.7 0.11 13.4 7.7 1.2 1 0 0 1 1 1 0 Ribosomal L18 C-terminal region Periviscerokin PF08259.11 ORF85712 - 5.5 7.6 6.7 7.9 7.1 0.5 3.7 3 1 0 3 3 3 0 Periviscerokinin family DUF1364 PF07102.12 ORF8561 - 0.074 12.9 4.5 0.12 12.3 4.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1364) Pkinase PF00069.25 ORF84986 - 1.7e-11 44.0 0.1 1.9e-11 43.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF84986 - 5.1e-06 26.0 0.1 5.2e-06 25.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Tricho_coat PF05892.11 ORF84564 - 0.025 14.3 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 Trichovirus coat protein TOH_N PF12549.8 ORF84402 - 0.13 12.1 0.6 0.13 12.1 0.6 2.3 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal Hep_core_N PF08290.11 ORF83948 - 0.23 11.5 4.0 2 8.5 0.0 2.6 2 1 0 2 2 2 0 Hepatitis core protein, putative zinc finger DUF2990 PF11693.8 ORF83877 - 0.12 12.5 1.1 0.21 11.8 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) zf-ANAPC11 PF12861.7 ORF83787 - 1.6e-28 98.6 12.5 1.7e-28 98.5 12.5 1.0 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 ORF83787 - 2.5e-19 69.3 14.2 3.6e-19 68.8 14.2 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF83787 - 2.9e-06 27.0 12.6 6.9e-06 25.8 12.6 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF83787 - 2.9e-06 27.5 19.4 4.8e-05 23.6 19.4 2.4 1 1 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF83787 - 0.0003 20.8 8.6 0.00056 19.9 8.6 1.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF83787 - 0.00049 20.2 3.0 0.00049 20.2 3.0 2.5 2 1 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF83787 - 0.025 14.4 3.2 0.025 14.4 3.2 2.6 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain DUF2310 PF10071.9 ORF83787 - 0.049 12.9 1.1 0.049 12.9 1.1 1.4 2 0 0 2 2 2 0 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FANCL_C PF11793.8 ORF83787 - 0.078 13.2 13.1 0.27 11.4 13.1 2.0 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_5 PF14634.6 ORF83787 - 0.1 12.6 15.4 0.76 9.8 15.6 2.2 1 1 1 2 2 2 0 zinc-RING finger domain Rad50_zn_hook PF04423.14 ORF83787 - 0.1 12.4 0.1 0.1 12.4 0.1 1.9 3 0 0 3 3 3 0 Rad50 zinc hook motif zf-C3HC4_3 PF13920.6 ORF83787 - 0.23 11.4 15.8 4.9 7.1 14.8 2.4 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF83787 - 0.31 10.9 23.6 2.3e+02 1.7 23.6 3.2 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn-ribbon_8 PF09723.10 ORF83787 - 0.49 10.5 10.8 0.41 10.8 0.9 2.5 2 1 0 2 2 2 0 Zinc ribbon domain zf-RING_11 PF17123.5 ORF83787 - 1.3 8.8 18.0 25 4.7 18.0 2.6 1 1 0 1 1 1 0 RING-like zinc finger zf-HIT PF04438.16 ORF83787 - 6.7 6.7 10.8 2.4 8.1 5.4 2.3 2 1 0 2 2 2 0 HIT zinc finger GCIP PF13324.6 ORF82500 - 0.14 11.8 0.8 0.14 11.7 0.8 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting TraU PF06834.11 ORF8090 - 0.0043 16.4 0.1 0.0043 16.4 0.1 1.0 1 0 0 1 1 1 1 TraU protein PAS_9 PF13426.7 ORF80494 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF80494 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) EFG_C PF00679.24 ORF79967 - 2.1e-26 91.8 0.1 2.3e-26 91.6 0.1 1.0 1 0 0 1 1 1 1 Elongation factor G C-terminus Fumarate_red_C PF02300.17 ORF79845 - 0.038 14.1 1.2 0.042 13.9 1.2 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit C DUF1385 PF07136.11 ORF79845 - 0.046 13.0 4.7 0.05 12.9 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) PGG PF13962.6 ORF79845 - 1.5 8.7 7.0 2.2 8.1 6.9 1.4 1 1 0 1 1 1 0 Domain of unknown function VP40 PF07447.12 ORF7960 - 0.097 11.8 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Matrix protein VP40 GF_recep_IV PF14843.6 ORF79592 - 0.18 11.6 10.4 0.21 11.4 10.4 1.0 1 0 0 1 1 1 0 Growth factor receptor domain IV SF3a60_bindingd PF12108.8 ORF79575 - 0.032 14.1 1.4 0.057 13.3 1.4 1.5 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain Salt_tol_Pase PF09506.10 ORF79575 - 0.16 10.7 3.6 0.15 10.8 3.6 1.0 1 0 0 1 1 1 0 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) Pico_P2A PF00947.19 ORF7867 - 0.024 14.7 1.5 0.027 14.5 1.5 1.1 1 0 0 1 1 1 0 Picornavirus core protein 2A Tricho_coat PF05892.11 ORF78269 - 0.025 14.3 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 Trichovirus coat protein PAS_9 PF13426.7 ORF77313 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF77313 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) GST_C_2 PF13410.6 ORF76839 - 3.1e-05 23.9 0.0 3.8e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF76839 - 4.1e-05 23.3 0.0 5.4e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF76839 - 0.00015 21.9 0.0 0.00017 21.8 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF76839 - 0.0057 16.8 0.0 0.0068 16.6 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain PAS_9 PF13426.7 ORF76569 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF76569 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) PAS_9 PF13426.7 ORF76392 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF76392 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) AP3D1 PF06375.11 ORF75609 - 2.3 8.4 19.1 2.8 8.1 19.1 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF4603 PF15376.6 ORF75609 - 9.1 3.5 14.4 9.3 3.5 14.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) DUF2955 PF11168.8 ORF74759 - 0.055 13.3 0.3 0.065 13.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2955) Fumarate_red_C PF02300.17 ORF7450 - 0.038 14.1 1.2 0.042 13.9 1.2 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit C DUF1385 PF07136.11 ORF7450 - 0.046 13.0 4.7 0.05 12.9 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) PGG PF13962.6 ORF7450 - 1.5 8.7 7.0 2.2 8.1 6.9 1.4 1 1 0 1 1 1 0 Domain of unknown function GST_C_2 PF13410.6 ORF72814 - 0.071 13.1 0.4 0.19 11.7 0.4 1.7 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Transketolase_C PF02780.20 ORF72735 - 2.3e-12 46.9 0.0 2.6e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Transketolase, C-terminal domain KTSC PF13619.6 ORF72534 - 0.18 11.7 0.3 0.18 11.7 0.3 1.5 2 0 0 2 2 2 0 KTSC domain DEP PF00610.21 ORF72189 - 0.16 12.1 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) B-block_TFIIIC PF04182.12 ORF72016 - 0.028 14.6 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC GnsAB_toxin PF08178.11 ORF7168 - 0.0054 16.6 0.1 0.0081 16.1 0.1 1.2 1 0 0 1 1 1 1 GnsA/GnsB toxin of bacterial toxin-antitoxin system MyTH4 PF00784.17 ORF7142 - 0.042 14.3 3.9 0.29 11.6 0.1 2.1 2 0 0 2 2 2 0 MyTH4 domain DUF4257 PF14074.6 ORF71355 - 0.067 13.4 0.2 0.093 13.0 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4257) PmrD PF11183.8 ORF71218 - 1.5e-40 137.2 0.3 1.7e-40 137.0 0.3 1.0 1 0 0 1 1 1 1 Polymyxin resistance protein PmrD Imm42 PF15593.6 ORF70749 - 0.29 11.6 1.7 0.35 11.3 1.7 1.1 1 0 0 1 1 1 0 Immunity protein 42 Topoisom_I_N PF02919.15 ORF70675 - 0.11 12.0 0.3 0.13 11.7 0.3 1.0 1 0 0 1 1 1 0 Eukaryotic DNA topoisomerase I, DNA binding fragment Putative_PNPOx PF01243.20 ORF70516 - 0.0089 16.2 0.0 0.011 15.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase TraS PF10624.9 ORF69472 - 0.058 13.3 0.2 0.064 13.2 0.2 1.1 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS DUF1125 PF06563.11 ORF69472 - 0.16 11.9 0.0 0.25 11.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1125) FAM199X PF15814.5 ORF69396 - 1.3 8.0 7.0 1.5 7.8 7.0 1.0 1 0 0 1 1 1 0 Protein family FAM199X Dynein_light PF01221.18 ORF69212 - 5.8e-27 93.8 0.7 6.2e-27 93.7 0.7 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 DUF3593 PF12159.8 ORF68384 - 0.048 13.7 0.1 0.062 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3593) DUF1270 PF06900.11 ORF68383 - 3.5 8.1 9.5 0.48 10.8 3.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1270) MNSV_P7B PF06692.11 ORF6806 - 0.036 14.0 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Melon necrotic spot virus P7B protein RsbU_N PF08673.10 ORF67789 - 0.055 13.6 0.1 0.07 13.2 0.1 1.1 1 0 0 1 1 1 0 Phosphoserine phosphatase RsbU, N-terminal domain Sigma70_r3 PF04539.16 ORF67554 - 0.0072 16.4 0.0 0.013 15.6 0.0 1.3 1 0 0 1 1 1 1 Sigma-70 region 3 DUF842 PF05811.13 ORF67247 - 0.0043 16.8 3.0 0.0051 16.5 1.5 1.8 1 1 1 2 2 2 1 Eukaryotic protein of unknown function (DUF842) VAPB_antitox PF02697.14 ORF67247 - 0.029 15.2 1.4 0.036 14.8 0.5 1.7 1 1 0 1 1 1 0 Putative antitoxin DDE_Tnp_1_2 PF13586.6 ORF67247 - 0.062 13.7 0.2 0.089 13.2 0.2 1.4 1 1 0 1 1 1 0 Transposase DDE domain OmpH PF03938.14 ORF67247 - 0.071 13.4 13.1 0.16 12.3 12.9 1.7 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Lipoprotein_16 PF03923.13 ORF67247 - 0.094 12.4 2.4 1.7 8.3 0.3 2.0 1 1 1 2 2 2 0 Uncharacterized lipoprotein YabA PF06156.13 ORF67247 - 0.12 13.0 4.7 0.16 12.7 4.7 1.2 1 0 0 1 1 1 0 Initiation control protein YabA DHR10 PF18595.1 ORF67247 - 0.13 12.4 8.7 0.27 11.3 4.1 2.0 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain CotJB PF12652.7 ORF67247 - 0.13 12.5 0.8 0.13 12.5 0.8 2.3 1 1 1 2 2 2 0 CotJB protein DUF2959 PF11172.8 ORF67247 - 0.13 12.3 7.0 0.13 12.3 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2959) Mer2 PF09074.10 ORF67247 - 0.2 11.4 5.6 0.22 11.3 5.6 1.1 1 0 0 1 1 1 0 Mer2 CREPT PF16566.5 ORF67247 - 0.27 11.4 8.0 0.53 10.5 0.7 2.0 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Mod_r PF07200.13 ORF67247 - 0.42 10.7 11.8 3.3 7.8 11.8 2.0 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein DUF4404 PF14357.6 ORF67247 - 0.46 11.2 2.9 0.95 10.1 2.9 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) TMPIT PF07851.13 ORF67247 - 0.49 9.6 8.6 0.52 9.5 8.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein FapA PF03961.13 ORF67247 - 0.9 8.1 9.1 0.92 8.0 9.1 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A BST2 PF16716.5 ORF67247 - 1 10.0 8.0 0.29 11.7 4.1 1.9 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 YtxH PF12732.7 ORF67247 - 1.1 9.9 5.0 13 6.4 5.0 2.3 1 1 0 1 1 1 0 YtxH-like protein TarH PF02203.15 ORF67247 - 1.1 9.1 6.0 1.2 9.0 6.0 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue Exonuc_VII_L PF02601.15 ORF67247 - 1.8 8.1 5.3 1.7 8.1 5.3 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF2408 PF10303.9 ORF67247 - 2.4 8.7 8.1 1.9 9.0 1.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) FlxA PF14282.6 ORF67247 - 5.9 6.9 11.0 16 5.6 10.9 1.8 1 1 1 2 2 2 0 FlxA-like protein Baculo_E56 PF04639.12 ORF65776 - 0.13 11.5 1.4 0.14 11.5 1.4 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope zf-RING_11 PF17123.5 ORF65463 - 0.021 14.5 0.1 0.062 13.1 0.1 1.9 2 0 0 2 2 2 0 RING-like zinc finger Vac14_Fab1_bd PF12755.7 ORF64294 - 0.00074 20.1 0.2 0.0011 19.5 0.2 1.3 1 1 0 1 1 1 1 Vacuolar 14 Fab1-binding region HEAT PF02985.22 ORF64294 - 0.0031 17.6 0.1 0.013 15.7 0.0 2.0 2 0 0 2 2 2 1 HEAT repeat Cys_rich_FGFR PF00839.17 ORF64294 - 0.0032 17.6 0.0 0.011 15.9 0.0 1.7 1 1 1 2 2 2 1 Cysteine rich repeat Adaptin_N PF01602.20 ORF64294 - 0.0044 15.7 0.0 0.0048 15.5 0.0 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Herpes_heli_pri PF05774.11 ORF64294 - 0.028 14.7 0.0 0.032 14.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus helicase-primase complex component UPF0182 PF03699.13 ORF63583 - 0.9 7.6 4.2 1.1 7.4 4.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) Malt_amylase_C PF16657.5 ORF63404 - 8.8e-05 22.5 0.1 0.00011 22.2 0.1 1.2 1 0 0 1 1 1 1 Maltogenic Amylase, C-terminal domain DUF3459 PF11941.8 ORF63404 - 0.0025 18.1 0.0 0.0028 18.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3459) Alpha-amylase_C PF02806.18 ORF63404 - 0.14 12.7 0.4 0.16 12.5 0.4 1.3 1 1 0 1 1 1 0 Alpha amylase, C-terminal all-beta domain Cyc-maltodext_C PF10438.9 ORF63404 - 0.18 11.9 0.1 0.28 11.3 0.1 1.2 1 0 0 1 1 1 0 Cyclo-malto-dextrinase C-terminal domain zf-NOSIP PF15906.5 ORF63080 - 0.18 12.0 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Zinc-finger of nitric oxide synthase-interacting protein Neisseria_TspB PF05616.13 ORF61879 - 0.64 8.4 1.2 0.76 8.2 1.2 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein HisK_sensor PF18698.1 ORF61700 - 0.058 13.8 0.3 0.071 13.5 0.3 1.1 1 0 0 1 1 1 0 Histidine kinase sensor domain DUF2951 PF11166.8 ORF61481 - 0.87 9.8 6.4 2.9 8.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) LRR_6 PF13516.6 ORF61411 - 1.3 9.3 4.5 16 5.9 0.1 2.6 2 0 0 2 2 2 0 Leucine Rich repeat DUF3739 PF12545.8 ORF60215 - 0.081 13.4 0.0 0.098 13.1 0.0 1.3 1 1 0 1 1 1 0 Filamentous haemagglutinin family outer membrane protein DUF3977 PF13122.6 ORF60196 - 0.059 13.6 0.1 0.12 12.6 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3977) CLIP_SPH_mas PF18398.1 ORF59490 - 1.6 9.2 10.1 4.6 7.7 0.6 2.5 2 1 0 2 2 2 0 Clip-domain serine protease homolog masquerade Kinesin PF00225.23 ORF59059 - 6.5e-27 94.3 1.2 7e-27 94.2 1.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Syntaxin-18_N PF10496.9 ORF59059 - 0.059 13.6 0.1 0.078 13.2 0.0 1.3 1 1 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus Topoisom_I_N PF02919.15 ORF57422 - 0.11 12.0 0.3 0.13 11.7 0.3 1.0 1 0 0 1 1 1 0 Eukaryotic DNA topoisomerase I, DNA binding fragment DUF2258 PF10015.9 ORF55741 - 0.095 12.8 0.9 1.7 8.8 0.1 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) zf-4CXXC_R1 PF10497.9 ORF5489 - 0.056 13.7 9.6 0.081 13.2 9.6 1.3 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 MecA_N PF05223.11 ORF54780 - 0.14 12.4 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 NTF2-like N-terminal transpeptidase domain zf-4CXXC_R1 PF10497.9 ORF54616 - 0.056 13.7 9.6 0.081 13.2 9.6 1.3 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Transposase_1 PF01359.18 ORF52153 - 0.025 14.4 0.2 0.039 13.8 0.2 1.2 1 0 0 1 1 1 0 Transposase (partial DDE domain) Use1 PF09753.9 ORF52153 - 0.044 13.5 0.2 0.06 13.1 0.2 1.1 1 0 0 1 1 1 0 Membrane fusion protein Use1 CD45 PF12567.8 ORF52092 - 1.4 9.0 8.2 0.86 9.6 5.8 1.9 1 1 1 2 2 2 0 Leukocyte receptor CD45 DUF1980 PF09323.10 ORF50979 - 0.088 12.7 1.1 0.1 12.5 1.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF2544 PF11245.8 ORF50819 - 0.25 10.7 1.8 1.3 8.4 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2544) Transposase_1 PF01359.18 ORF49822 - 0.025 14.4 0.2 0.039 13.8 0.2 1.2 1 0 0 1 1 1 0 Transposase (partial DDE domain) Use1 PF09753.9 ORF49822 - 0.044 13.5 0.2 0.06 13.1 0.2 1.1 1 0 0 1 1 1 0 Membrane fusion protein Use1 zf-RING_6 PF14835.6 ORF48876 - 0.037 13.9 1.4 0.068 13.1 1.4 1.4 1 0 0 1 1 1 0 zf-RING of BARD1-type protein DUF2951 PF11166.8 ORF4860 - 0.87 9.8 6.4 2.9 8.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) AstA PF04958.12 ORF48082 - 0.063 11.8 0.0 0.068 11.7 0.0 1.1 1 0 0 1 1 1 0 Arginine N-succinyltransferase beta subunit DUF2254 PF10011.9 ORF47104 - 0.093 11.5 0.2 0.11 11.4 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF647 PF04884.14 ORF46387 - 0.05 13.2 0.2 0.064 12.9 0.2 1.1 1 0 0 1 1 1 0 Vitamin B6 photo-protection and homoeostasis DBINO PF13892.6 ORF46071 - 0.061 13.7 5.7 0.073 13.4 5.7 1.1 1 0 0 1 1 1 0 DNA-binding domain PDDEXK_3 PF13366.6 ORF45817 - 0.038 14.3 0.1 0.047 14.0 0.1 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Jak1_Phl PF17887.1 ORF45777 - 0.063 13.2 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain Popeye PF04831.13 ORF45554 - 2 8.6 5.5 1.2 9.3 2.5 1.8 1 1 1 2 2 2 0 Popeye protein conserved region DUF2842 PF11003.8 ORF44693 - 0.74 10.1 10.7 2.4 8.5 1.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2842) Orthopox_A49R PF06489.11 ORF43597 - 0.022 15.0 0.9 0.025 14.8 0.9 1.1 1 0 0 1 1 1 0 Orthopoxvirus A49R protein DUF1981 PF09324.10 ORF43321 - 0.036 13.9 1.1 1.4 8.8 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF1981) Ost5 PF05251.12 ORF43084 - 0.0088 16.3 0.7 0.016 15.5 0.7 1.3 1 0 0 1 1 1 1 Oligosaccharyltransferase subunit 5 Fumarate_red_C PF02300.17 ORF42693 - 0.038 14.1 1.2 0.042 13.9 1.2 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit C DUF1385 PF07136.11 ORF42693 - 0.046 13.0 4.7 0.05 12.9 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) PGG PF13962.6 ORF42693 - 1.5 8.7 7.0 2.2 8.1 6.9 1.4 1 1 0 1 1 1 0 Domain of unknown function LysR_substrate PF03466.20 ORF42387 - 0.025 13.9 0.0 0.029 13.7 0.0 1.1 1 0 0 1 1 1 0 LysR substrate binding domain DUF2824 PF11039.8 ORF4041 - 0.22 11.5 0.0 0.28 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2824) Ntox1 PF15500.6 ORF40013 - 0.37 11.2 1.2 0.45 10.9 1.2 1.2 1 0 0 1 1 1 0 Putative RNase-like toxin, toxin_1 EF-hand_1 PF00036.32 ORF39777 - 1.4e-06 27.4 0.2 3e-06 26.4 0.1 1.6 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF39777 - 3.1e-06 26.7 0.1 7.9e-06 25.4 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF39777 - 0.00053 20.4 0.2 0.0011 19.4 0.0 1.6 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF39777 - 0.00074 18.9 0.4 0.0015 18.0 0.4 1.5 1 0 0 1 1 1 1 EF hand Caleosin PF05042.13 ORF39777 - 0.041 13.8 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Caleosin related protein HCV_NS5a PF01506.19 ORF39767 - 0.13 12.1 1.8 0.13 12.1 1.8 1.9 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a protein membrane anchor DUF5134 PF17197.4 ORF39598 - 0.02 14.8 2.0 0.024 14.6 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5134) Glycoprotein_G PF00802.19 ORF39459 - 2.8 7.2 7.2 4 6.7 7.2 1.2 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G ATG16 PF08614.11 ORF38588 - 0.00054 20.3 1.3 0.00083 19.6 1.3 1.3 1 1 0 1 1 1 1 Autophagy protein 16 (ATG16) FliL PF03748.14 ORF38588 - 0.0026 18.3 2.3 0.0088 16.6 1.1 1.9 1 1 1 2 2 2 1 Flagellar basal body-associated protein FliL LemA PF04011.12 ORF38588 - 0.015 15.1 0.2 0.021 14.7 0.2 1.2 1 0 0 1 1 1 0 LemA family tRNA-synt_1g PF09334.11 ORF38588 - 0.048 12.4 0.2 0.052 12.3 0.2 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) FAD_SOX PF18371.1 ORF38588 - 0.07 13.5 0.1 0.082 13.3 0.1 1.1 1 0 0 1 1 1 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase POTRA PF07244.15 ORF38588 - 0.49 11.0 3.3 7.5 7.2 0.6 2.1 1 1 1 2 2 2 0 Surface antigen variable number repeat DUF5547 PF17701.1 ORF3835 - 0.013 15.4 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Caenor_Her-1 PF09232.10 ORF38013 - 0.041 14.0 0.5 0.045 13.9 0.5 1.1 1 0 0 1 1 1 0 Caenorhabditis elegans Her-1 PHD_2 PF13831.6 ORF37942 - 0.056 13.0 0.2 0.11 12.0 0.2 1.5 1 0 0 1 1 1 0 PHD-finger zf-C3HC4_2 PF13923.6 ORF36561 - 1.6e-08 34.2 5.3 2.3e-08 33.7 5.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF36561 - 5.7e-08 32.5 6.5 9.2e-08 31.8 6.5 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF36561 - 4.2e-07 29.7 4.3 6.1e-07 29.2 4.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF36561 - 9.8e-07 28.6 4.8 1.4e-06 28.2 4.8 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF36561 - 2.7e-06 27.6 4.4 4.2e-06 27.0 4.4 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_6 PF14835.6 ORF36561 - 2.6e-05 24.0 0.3 3.5e-05 23.6 0.3 1.3 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-rbx1 PF12678.7 ORF36561 - 9e-05 22.7 2.8 0.00015 21.9 2.8 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain Prok-RING_4 PF14447.6 ORF36561 - 0.00021 21.1 3.1 0.00031 20.5 3.1 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF36561 - 0.00041 20.3 0.3 0.00041 20.3 0.3 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-P11 PF03854.14 ORF36561 - 0.0023 17.6 1.2 0.0033 17.0 1.2 1.2 1 0 0 1 1 1 1 P-11 zinc finger zf-Nse PF11789.8 ORF36561 - 0.0023 17.7 5.4 0.0023 17.7 5.4 1.8 2 0 0 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_4 PF14570.6 ORF36561 - 0.0033 17.2 3.4 0.0053 16.5 3.4 1.3 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF36561 - 0.0045 17.1 6.2 0.0089 16.2 6.2 1.5 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Med21 PF11221.8 ORF36561 - 0.011 16.0 1.4 0.013 15.7 1.4 1.1 1 0 0 1 1 1 0 Subunit 21 of Mediator complex zf-ANAPC11 PF12861.7 ORF36561 - 0.02 14.9 0.8 0.028 14.5 0.8 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_5 PF17121.5 ORF36561 - 0.29 11.1 5.3 0.82 9.6 5.3 1.7 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF1010 PF06231.11 ORF361 - 1.7 9.2 11.5 0.67 10.5 6.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1010) KapB PF08810.10 ORF35779 - 0.063 13.4 0.2 0.076 13.2 0.2 1.1 1 0 0 1 1 1 0 Kinase associated protein B Noelin-1 PF12308.8 ORF35779 - 0.08 12.9 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Neurogenesis glycoprotein PRMT5_C PF17286.2 ORF35573 - 0.081 12.8 0.5 0.099 12.5 0.5 1.1 1 0 0 1 1 1 0 PRMT5 oligomerisation domain CAP PF00188.26 ORF35425 - 0.012 16.5 0.0 0.013 16.3 0.0 1.1 1 0 0 1 1 1 0 Cysteine-rich secretory protein family CoA_trans PF01144.23 ORF35303 - 0.0014 18.1 0.1 0.0015 17.9 0.1 1.1 1 0 0 1 1 1 1 Coenzyme A transferase betaPIX_CC PF16523.5 ORF35303 - 0.063 13.1 0.1 0.096 12.5 0.1 1.4 1 0 0 1 1 1 0 betaPIX coiled coil 2OG-FeII_Oxy PF03171.20 ORF34342 - 0.022 15.3 0.0 0.029 14.9 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily zf-4CXXC_R1 PF10497.9 ORF33511 - 0.056 13.7 9.6 0.081 13.2 9.6 1.3 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Metallophos PF00149.28 ORF33412 - 4.4e-07 30.6 0.0 4.7e-07 30.5 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PTRF_SDPR PF15237.6 ORF3339 - 0.0037 16.9 4.3 0.0047 16.6 4.3 1.2 1 0 0 1 1 1 1 PTRF/SDPR family TBCA PF02970.16 ORF3339 - 0.009 16.3 3.3 0.016 15.5 3.3 1.4 1 1 0 1 1 1 1 Tubulin binding cofactor A AAA_13 PF13166.6 ORF3339 - 0.013 14.2 2.8 0.015 14.0 2.8 1.0 1 0 0 1 1 1 0 AAA domain CC2-LZ PF16516.5 ORF3339 - 0.03 14.7 3.4 0.035 14.5 3.4 1.2 1 0 0 1 1 1 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF16 PF01519.16 ORF3339 - 0.039 14.4 1.0 0.043 14.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 Spc7 PF08317.11 ORF3339 - 0.043 12.7 4.8 0.045 12.6 4.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF2120 PF09893.9 ORF3339 - 0.06 13.4 0.6 0.063 13.4 0.6 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) TMPIT PF07851.13 ORF3339 - 0.088 12.0 5.9 0.098 11.9 5.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein TMF_DNA_bd PF12329.8 ORF3339 - 0.2 11.7 7.0 0.29 11.2 7.0 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF4201 PF13870.6 ORF3339 - 0.26 11.0 7.9 0.34 10.6 7.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) FCH PF00611.23 ORF3339 - 0.27 11.5 5.2 1.3 9.4 5.2 2.0 1 1 0 1 1 1 0 Fes/CIP4, and EFC/F-BAR homology domain XhlA PF10779.9 ORF3339 - 0.39 11.0 4.6 0.56 10.4 4.6 1.2 1 0 0 1 1 1 0 Haemolysin XhlA Prefoldin_2 PF01920.20 ORF3339 - 0.6 10.1 6.9 4.3 7.3 1.4 2.1 1 1 1 2 2 2 0 Prefoldin subunit SabA_adhesion PF18304.1 ORF3289 - 0.0096 15.2 0.6 0.01 15.1 0.6 1.0 1 0 0 1 1 1 1 SabA N-terminal extracellular adhesion domain DUF4834 PF16118.5 ORF3289 - 0.33 11.9 1.9 0.46 11.5 1.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) RskA PF10099.9 ORF32801 - 0.14 12.5 0.4 0.17 12.2 0.4 1.0 1 0 0 1 1 1 0 Anti-sigma-K factor rskA FAM199X PF15814.5 ORF32020 - 1.3 8.0 7.0 1.5 7.8 7.0 1.0 1 0 0 1 1 1 0 Protein family FAM199X PIEZO PF15917.5 ORF31567 - 0.31 10.5 2.7 0.32 10.4 2.7 1.2 1 0 0 1 1 1 0 Piezo Ras PF00071.22 ORF30962 - 2e-10 40.5 0.1 2.3e-10 40.3 0.1 1.1 1 0 0 1 1 1 1 Ras family Pup_ligase PF03136.15 ORF30522 - 0.1 11.6 0.2 0.1 11.6 0.2 1.0 1 0 0 1 1 1 0 Pup-ligase protein N_methyl PF07963.12 ORF29982 - 9.1 6.0 8.8 2.5 7.8 4.9 2.0 2 0 0 2 2 2 0 Prokaryotic N-terminal methylation motif DUF1479 PF07350.12 ORF29711 - 0.12 11.1 0.1 0.13 10.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) DUF2254 PF10011.9 ORF28995 - 0.087 11.6 0.2 0.096 11.5 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks305.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks305.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks305.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks305.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:15:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PGG PF13962.6 ORF27994 - 0.28 11.0 11.9 0.36 10.6 11.9 1.2 1 0 0 1 1 1 0 Domain of unknown function Dpy19 PF10034.9 ORF27267 - 0.048 11.9 0.0 0.069 11.4 0.0 1.2 1 0 0 1 1 1 0 Q-cell neuroblast polarisation KxDL PF10241.9 ORF270 - 0.014 15.7 0.2 0.018 15.3 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein DUF2408 PF10303.9 ORF270 - 0.037 14.6 0.2 0.043 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) AAA_34 PF13872.6 ORF270 - 0.12 11.2 0.1 0.14 11.0 0.1 1.1 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 Oxidored_q5_N PF01059.17 ORF26356 - 0.0056 16.7 8.5 0.0061 16.6 8.5 1.2 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase chain 4, amino terminus MNSV_P7B PF06692.11 ORF26356 - 0.059 13.4 0.6 0.1 12.6 0.1 1.6 1 1 1 2 2 2 0 Melon necrotic spot virus P7B protein DUF2258 PF10015.9 ORF25722 - 0.095 12.8 0.9 1.7 8.8 0.1 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) Transposase_1 PF01359.18 ORF25510 - 0.025 14.4 0.2 0.039 13.8 0.2 1.2 1 0 0 1 1 1 0 Transposase (partial DDE domain) Use1 PF09753.9 ORF25510 - 0.044 13.5 0.2 0.06 13.1 0.2 1.1 1 0 0 1 1 1 0 Membrane fusion protein Use1 Kinesin PF00225.23 ORF25327 - 6.5e-27 94.3 1.2 7e-27 94.2 1.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Syntaxin-18_N PF10496.9 ORF25327 - 0.059 13.6 0.1 0.078 13.2 0.0 1.3 1 1 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus tRNA-synt_2 PF00152.20 ORF2388 - 0.08 12.0 1.8 0.085 11.9 1.8 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) Fumarate_red_C PF02300.17 ORF2309 - 0.038 14.1 1.2 0.042 13.9 1.2 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit C DUF1385 PF07136.11 ORF2309 - 0.046 13.0 4.7 0.05 12.9 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) PGG PF13962.6 ORF2309 - 1.5 8.7 7.0 2.2 8.1 6.9 1.4 1 1 0 1 1 1 0 Domain of unknown function DGC PF08859.11 ORF23029 - 0.09 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 DGC domain ERCC4 PF02732.15 ORF22042 - 0.02 15.1 2.7 0.024 14.8 2.7 1.3 1 1 0 1 1 1 0 ERCC4 domain SF3A3 PF16837.5 ORF22042 - 0.31 11.6 3.1 0.46 11.0 0.3 2.0 1 1 1 2 2 2 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 Toxin_16 PF07945.11 ORF21705 - 0.066 13.1 5.2 0.14 12.1 5.2 1.5 1 0 0 1 1 1 0 Janus-atracotoxin HscB_4_cys PF18256.1 ORF21511 - 0.25 11.2 0.4 0.25 11.2 0.4 1.6 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif DUF4408 PF14364.6 ORF21311 - 0.096 12.4 0.8 0.096 12.4 0.8 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4408) zf-4CXXC_R1 PF10497.9 ORF19694 - 0.056 13.7 9.6 0.081 13.2 9.6 1.3 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 KASH_CCD PF14662.6 ORF19593 - 0.014 15.3 2.8 0.017 15.0 2.8 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH GIT_CC PF16559.5 ORF19593 - 0.022 14.6 4.3 0.13 12.1 2.2 2.1 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor HALZ PF02183.18 ORF19593 - 0.027 14.7 1.1 0.25 11.6 0.1 2.0 1 1 0 2 2 2 0 Homeobox associated leucine zipper CLZ PF16526.5 ORF19593 - 0.033 14.5 2.3 0.068 13.5 2.2 1.6 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels TSC22 PF01166.18 ORF19593 - 0.035 14.4 0.9 0.054 13.8 0.9 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family PI3K_P85_iSH2 PF16454.5 ORF19593 - 0.037 13.6 2.0 0.043 13.4 2.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF1640 PF07798.11 ORF19593 - 0.051 13.6 2.7 0.065 13.3 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DivIC PF04977.15 ORF19593 - 0.072 12.9 0.2 0.096 12.5 0.2 1.3 1 0 0 1 1 1 0 Septum formation initiator ZapB PF06005.12 ORF19593 - 0.091 13.2 1.9 0.12 12.9 1.9 1.2 1 0 0 1 1 1 0 Cell division protein ZapB bZIP_1 PF00170.21 ORF19593 - 0.097 12.8 1.1 0.27 11.4 0.7 1.7 1 1 1 2 2 2 0 bZIP transcription factor DivIVA PF05103.13 ORF19593 - 0.1 12.7 0.7 0.13 12.4 0.7 1.1 1 0 0 1 1 1 0 DivIVA protein FlaC_arch PF05377.11 ORF19593 - 0.12 12.8 0.4 0.55 10.7 0.2 1.8 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) BRE1 PF08647.11 ORF19593 - 0.14 12.2 3.4 0.17 11.9 3.4 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase Sec2p PF06428.11 ORF19593 - 0.16 11.9 3.5 0.2 11.6 3.5 1.1 1 0 0 1 1 1 0 GDP/GTP exchange factor Sec2p bZIP_2 PF07716.15 ORF19593 - 0.18 11.9 0.5 0.63 10.2 0.4 1.8 1 1 1 2 2 2 0 Basic region leucine zipper DUF588 PF04535.12 ORF18805 - 0.022 14.6 0.1 0.025 14.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF588) CART PF06373.11 ORF18375 - 0.011 15.8 0.3 0.016 15.4 0.3 1.2 1 0 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) PAS_9 PF13426.7 ORF18105 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF18105 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) EF-hand_14 PF17959.1 ORF17584 - 0.0063 16.8 1.4 0.014 15.7 1.4 1.7 1 1 0 1 1 1 1 EF-hand domain Flu_M1 PF00598.19 ORF17584 - 0.02 14.4 4.1 0.047 13.2 0.3 2.0 1 1 1 2 2 2 0 Influenza Matrix protein (M1) Nebulin PF00880.18 ORF17584 - 0.021 14.7 0.2 0.046 13.6 0.2 1.6 1 0 0 1 1 1 0 Nebulin repeat LAGLIDADG_3 PF14528.6 ORF17584 - 0.15 12.4 1.4 0.23 11.8 1.3 1.5 1 1 0 1 1 1 0 LAGLIDADG-like domain MFS_MOT1 PF16983.5 ORF17432 - 0.11 13.0 1.6 0.13 12.7 1.4 1.4 1 1 0 1 1 1 0 Molybdate transporter of MFS superfamily Popeye PF04831.13 ORF17286 - 2 8.6 5.5 1.2 9.3 2.5 1.8 1 1 1 2 2 2 0 Popeye protein conserved region MNSV_P7B PF06692.11 ORF17250 - 0.036 14.0 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Melon necrotic spot virus P7B protein US30 PF17624.2 ORF16552 - 0.07 12.2 0.5 0.079 12.0 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function US6 PF17616.2 ORF15736 - 0.018 15.0 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Viral unique short region 6 DUF2023 PF09633.10 ORF152738 - 0.073 13.2 0.0 0.094 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2023) VHS PF00790.19 ORF151988 - 5.2e-08 32.8 0.2 5.6e-08 32.7 0.2 1.0 1 0 0 1 1 1 1 VHS domain DUF3666 PF12408.8 ORF151988 - 0.041 13.1 0.0 0.071 12.3 0.0 1.4 1 0 0 1 1 1 0 Ribose-5-phosphate isomerase zf-C2H2 PF00096.26 ORF151886 - 4.7e-14 51.9 17.6 6.7e-06 26.3 3.0 3.1 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF151886 - 1.1e-12 47.8 7.4 6.5e-08 32.7 1.8 3.4 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF151886 - 7.1e-11 42.0 14.8 3e-05 24.5 2.5 3.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF151886 - 7.2e-06 25.7 3.5 0.00037 20.2 0.2 2.3 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-H2C2_5 PF13909.6 ORF151886 - 0.00057 19.6 6.5 0.00057 19.6 6.5 4.0 4 1 0 4 4 3 1 C2H2-type zinc-finger domain zf-C2HE PF16278.5 ORF151886 - 0.0007 20.0 3.6 0.0007 20.0 3.6 2.2 1 1 1 2 2 2 1 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_8 PF15909.5 ORF151886 - 0.0046 17.2 1.9 0.0046 17.2 1.9 2.0 1 1 0 1 1 1 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF151886 - 0.0095 16.3 12.9 0.047 14.1 1.5 2.7 3 0 0 3 3 3 2 Zinc-finger of C2H2 type GAGA PF09237.11 ORF151886 - 0.019 14.7 0.3 0.068 13.0 0.1 1.9 2 0 0 2 2 2 0 GAGA factor zf-BED PF02892.15 ORF151886 - 0.019 14.9 12.5 0.24 11.5 3.4 2.7 1 1 2 3 3 3 0 BED zinc finger DUF4764 PF15961.5 ORF151886 - 0.057 12.1 4.1 0.024 13.3 2.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4764) zf-Di19 PF05605.12 ORF151886 - 0.074 13.4 8.0 0.72 10.2 0.9 2.3 1 1 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Elf1 PF05129.13 ORF151886 - 0.1 12.6 4.0 0.19 11.8 4.0 1.5 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zf-C2H2_jaz PF12171.8 ORF151886 - 0.18 12.1 8.3 0.51 10.7 0.3 2.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-MYST PF17772.1 ORF151886 - 0.2 11.3 4.6 4.1 7.1 0.6 2.2 2 0 0 2 2 2 0 MYST family zinc finger domain zinc_ribbon_4 PF13717.6 ORF151886 - 0.22 11.5 3.4 2.2 8.3 0.1 2.6 2 1 1 3 3 3 0 zinc-ribbon domain C1_1 PF00130.22 ORF151886 - 0.24 11.3 6.7 0.21 11.5 4.2 2.3 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) OTT_1508_deam PF14441.6 ORF150957 - 0.49 10.4 3.3 0.89 9.6 3.3 1.5 1 1 0 1 1 1 0 OTT_1508-like deaminase MyTH4 PF00784.17 ORF150788 - 0.042 14.3 3.9 0.29 11.6 0.1 2.1 2 0 0 2 2 2 0 MyTH4 domain DUF809 PF05663.11 ORF150463 - 0.13 12.4 6.3 0.15 12.2 6.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Sigma_reg_N PF13800.6 ORF150463 - 4.1 7.8 8.9 0.14 12.5 0.9 2.0 1 1 1 2 2 2 0 Sigma factor regulator N-terminal Peptidase_C7 PF01830.18 ORF150417 - 0.011 15.2 3.3 0.011 15.2 3.3 1.1 1 0 0 1 1 1 0 Peptidase C7 family PAS_9 PF13426.7 ORF150359 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF150359 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) DUF2972 PF11186.8 ORF150023 - 0.03 14.3 7.5 0.038 13.9 7.5 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2972) tRNA-synt_2 PF00152.20 ORF149918 - 0.08 12.0 1.8 0.085 11.9 1.8 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) DUF3915 PF13054.6 ORF149245 - 2 8.4 5.2 2.6 8.1 5.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF2258 PF10015.9 ORF149001 - 0.095 12.8 0.9 1.7 8.8 0.1 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2258) Arteri_Gl PF00951.18 ORF148304 - 0.011 15.5 1.8 0.012 15.4 1.8 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein Ada_Zn_binding PF02805.16 ORF147991 - 0.00076 19.5 0.3 0.0017 18.4 0.0 1.7 2 1 0 2 2 2 1 Metal binding domain of Ada PAS_9 PF13426.7 ORF147150 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF147150 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) DUF4801 PF16059.5 ORF146494 - 0.09 12.7 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) Glyco_hydro_65m PF03632.15 ORF146 - 0.063 12.1 0.0 0.065 12.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 65 central catalytic domain DUF3586 PF12131.8 ORF146 - 0.47 10.7 7.1 0.092 13.0 1.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3586) SipA_VBS PF17985.1 ORF14501 - 0.1 12.6 0.6 0.2 11.6 0.6 1.5 1 0 0 1 1 1 0 SipA vinculin binding site Lipoprotein_20 PF13942.6 ORF14501 - 0.15 12.0 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 YfhG lipoprotein DUF5350 PF17299.2 ORF144750 - 0.035 14.6 0.1 0.055 14.0 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5350) DUF816 PF05674.12 ORF144493 - 0.032 14.2 0.9 0.037 14.0 0.9 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF816) DUF905 PF06006.12 ORF14336 - 0.11 12.5 0.1 0.18 11.8 0.0 1.5 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF905) YEATS PF03366.16 ORF143245 - 2.1e-12 46.8 0.0 2.6e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 YEATS family DiSB-ORF2_chro PF16506.5 ORF143245 - 0.019 15.0 0.3 0.05 13.6 0.0 1.8 2 0 0 2 2 2 0 Putative virion glycoprotein of insect viruses Alpha-amyl_C PF09071.10 ORF143244 - 0.017 15.0 0.2 0.046 13.6 0.2 1.9 1 1 0 1 1 1 0 Alpha-amylase, C terminal LIM_bind PF01803.16 ORF143091 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 LIM-domain binding protein DUF573 PF04504.14 ORF141607 - 0.17 12.5 3.0 0.19 12.4 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF573 MetOD2 PF18548.1 ORF141466 - 0.014 15.5 1.1 0.016 15.3 0.6 1.5 1 1 0 1 1 1 0 Metanogen output domain 2 zf-TAZ PF02135.16 ORF140122 - 0.022 15.2 1.2 0.034 14.6 0.5 1.6 2 0 0 2 2 2 0 TAZ zinc finger zf-4CXXC_R1 PF10497.9 ORF139423 - 0.056 13.7 9.6 0.081 13.2 9.6 1.3 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 YitT_membrane PF02588.15 ORF138405 - 0.24 10.7 3.2 0.28 10.5 3.2 1.1 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PRMT5_C PF17286.2 ORF138257 - 0.081 12.8 0.5 0.099 12.5 0.5 1.1 1 0 0 1 1 1 0 PRMT5 oligomerisation domain Creatinase_N PF01321.18 ORF138203 - 7.1e-11 42.9 0.0 8.1e-11 42.7 0.0 1.0 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain PALP PF00291.25 ORF137793 - 0.038 13.4 0.1 0.041 13.3 0.1 1.0 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme DCAF17 PF15802.5 ORF137603 - 0.36 9.5 2.5 0.39 9.4 2.5 1.0 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 17 MORN PF02493.20 ORF137420 - 0.022 14.6 1.9 0.84 9.7 0.1 2.9 3 0 0 3 3 3 0 MORN repeat FliC_SP PF12613.8 ORF136560 - 0.34 11.4 0.9 0.62 10.6 0.9 1.5 1 1 0 1 1 1 0 Flagellin structural protein CBM_14 PF01607.24 ORF136133 - 0.006 16.7 3.1 1.1 9.5 0.4 2.1 1 1 1 2 2 2 2 Chitin binding Peritrophin-A domain DUF3915 PF13054.6 ORF135620 - 0.19 11.7 7.3 0.24 11.4 7.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) zf-RING_2 PF13639.6 ORF135520 - 6.6e-14 52.0 4.6 8.7e-14 51.6 4.6 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF135520 - 2.9e-09 36.6 6.1 4e-09 36.2 6.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF135520 - 3.2e-09 36.9 6.0 6e-09 36.1 6.0 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF135520 - 6.3e-08 32.4 4.9 9.3e-08 31.8 4.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF135520 - 1.6e-07 31.1 3.2 2.2e-07 30.6 3.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF135520 - 3.3e-07 30.0 4.8 4.6e-07 29.6 4.8 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 ORF135520 - 4.7e-07 29.4 1.5 8.2e-07 28.7 1.5 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF135520 - 1.5e-06 28.1 4.0 2.9e-06 27.1 4.2 1.4 1 1 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF135520 - 2.8e-06 27.3 4.8 4.4e-06 26.6 4.8 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING-like PF08746.11 ORF135520 - 0.00016 21.9 3.8 0.00023 21.4 3.8 1.3 1 0 0 1 1 1 1 RING-like domain zf-ANAPC11 PF12861.7 ORF135520 - 0.00078 19.4 4.8 0.0059 16.6 4.8 2.1 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF135520 - 0.0023 17.5 5.1 0.004 16.7 5.1 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF135520 - 0.017 15.2 3.5 0.039 14.1 3.5 1.6 1 1 0 1 1 1 0 RING-variant domain Zf_RING PF16744.5 ORF135520 - 0.043 13.9 2.5 0.085 13.0 2.6 1.5 1 1 0 1 1 1 0 KIAA1045 RING finger zf-RING_10 PF16685.5 ORF135520 - 0.063 13.4 3.8 0.083 13.0 3.8 1.1 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-Nse PF11789.8 ORF135520 - 0.064 13.1 1.5 0.087 12.7 1.5 1.2 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_4 PF14570.6 ORF135520 - 0.11 12.3 3.2 0.24 11.2 3.3 1.6 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF135520 - 0.15 12.3 5.9 0.46 10.7 6.0 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 ORF135520 - 0.54 10.5 5.0 1.3 9.3 5.0 1.7 1 1 0 1 1 1 0 FANCL C-terminal domain Glucos_trans_II PF14264.6 ORF135508 - 0.1 12.0 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII DUF2842 PF11003.8 ORF135346 - 0.74 10.1 10.7 2.4 8.5 1.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2842) Na_H_antiport_3 PF07399.11 ORF135023 - 0.48 9.2 6.6 0.51 9.2 6.6 1.0 1 0 0 1 1 1 0 Putative Na+/H+ antiporter DUF3331 PF11811.8 ORF134669 - 0.17 11.7 0.9 0.24 11.3 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) Thyroglob_assoc PF16597.5 ORF134349 - 0.18 12.2 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 Thyroglobulin_1 repeat associated disordered domain CymA PF16941.5 ORF13414 - 0.018 14.3 0.0 0.02 14.1 0.0 1.0 1 0 0 1 1 1 0 Putative cyclodextrin porin SMRP1 PF15181.6 ORF13340 - 0.038 13.6 0.0 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 Spermatid-specific manchette-related protein 1 ZapB PF06005.12 ORF133153 - 0.011 16.1 8.2 0.011 16.1 8.2 1.5 1 1 0 1 1 1 0 Cell division protein ZapB HIP1_clath_bdg PF16515.5 ORF133153 - 0.064 13.9 3.8 0.081 13.5 3.8 1.1 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 EGF_MSP1_1 PF12946.7 ORF132671 - 0.15 12.1 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 MSP1 EGF domain 1 DUF4655 PF15548.6 ORF132158 - 0.11 11.4 0.4 0.11 11.4 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4655) RRM_4 PF10598.9 ORF131698 - 0.07 13.5 0.0 0.096 13.0 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif of the spliceosomal PrP8 YitT_membrane PF02588.15 ORF130919 - 0.015 14.6 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LapA_dom PF06305.11 ORF130620 - 0.041 13.7 4.7 0.042 13.7 0.8 2.1 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DUF3564 PF12087.8 ORF130428 - 0.041 13.8 0.0 0.051 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3564) DUF501 PF04417.12 ORF129007 - 0.11 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF501) PGG PF13962.6 ORF128896 - 0.15 11.9 11.7 0.19 11.6 11.7 1.2 1 0 0 1 1 1 0 Domain of unknown function ATP1G1_PLM_MAT8 PF02038.16 ORF128649 - 0.11 11.9 0.2 0.2 11.1 0.2 1.4 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family DCP1 PF06058.13 ORF128636 - 0.048 13.6 0.1 0.057 13.4 0.1 1.1 1 0 0 1 1 1 0 Dcp1-like decapping family Gp49 PF05973.14 ORF128636 - 0.12 12.5 0.1 0.2 11.8 0.1 1.3 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) TilS_C PF11734.8 ORF128526 - 0.064 12.7 0.0 0.11 11.9 0.0 1.4 1 1 0 1 1 1 0 TilS substrate C-terminal domain DUF968 PF06147.11 ORF127653 - 0.42 10.8 0.8 0.44 10.8 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF968) zf-H2C2_2 PF13465.6 ORF127560 - 4.5e-09 36.3 5.7 3e-07 30.5 2.4 2.2 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF127560 - 4.3e-05 23.7 13.1 0.00038 20.7 7.8 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF127560 - 0.0017 19.0 10.1 0.0073 17.1 6.2 2.4 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF127560 - 0.005 16.6 2.0 0.011 15.4 2.0 1.6 1 0 0 1 1 1 1 zinc-finger C2H2-type DZR PF12773.7 ORF127560 - 0.025 14.6 0.0 0.027 14.5 0.0 1.2 1 0 0 1 1 1 0 Double zinc ribbon PriA_CRR PF18319.1 ORF127560 - 0.62 10.1 9.1 0.11 12.5 4.9 1.8 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain FAM199X PF15814.5 ORF126824 - 1.3 8.0 7.0 1.5 7.8 7.0 1.0 1 0 0 1 1 1 0 Protein family FAM199X Fumarate_red_C PF02300.17 ORF125932 - 0.038 14.1 1.2 0.042 13.9 1.2 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit C DUF1385 PF07136.11 ORF125932 - 0.055 12.7 5.0 0.059 12.7 5.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) PGG PF13962.6 ORF125932 - 1.2 9.0 6.5 1.7 8.5 6.5 1.4 1 1 0 1 1 1 0 Domain of unknown function Glycos_transf_2 PF00535.26 ORF125856 - 0.086 12.6 0.0 0.094 12.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF1700 PF08006.11 ORF125274 - 2.6 7.5 9.4 4.5 6.8 9.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1700) LRRC37AB_C PF14914.6 ORF124960 - 0.0013 18.6 0.3 0.0017 18.3 0.3 1.0 1 0 0 1 1 1 1 LRRC37A/B like protein 1 C-terminal domain DUF2273 PF10031.9 ORF124960 - 0.0066 16.4 0.8 0.0099 15.9 0.8 1.3 1 0 0 1 1 1 1 Small integral membrane protein (DUF2273) DUF3899 PF13038.6 ORF124960 - 0.0091 16.5 0.0 0.011 16.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3899) ETRAMP PF09716.10 ORF124960 - 0.15 12.2 1.0 0.22 11.6 1.0 1.5 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) META PF03724.16 ORF124930 - 0.087 12.8 0.1 0.14 12.1 0.1 1.7 1 1 0 1 1 1 0 META domain Fe-S_biosyn PF01521.20 ORF124046 - 0.043 14.0 0.5 0.05 13.8 0.5 1.2 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis Fe-S_biosyn PF01521.20 ORF123717 - 0.043 14.0 0.5 0.05 13.8 0.5 1.2 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis DUF2574 PF10836.8 ORF123639 - 0.077 12.9 0.0 0.088 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) AD PF09793.9 ORF123031 - 0.025 14.7 0.0 2.2 8.5 0.0 2.1 2 0 0 2 2 2 0 Anticodon-binding domain PAS_9 PF13426.7 ORF122122 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF122122 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) zf-RanBP PF00641.18 ORF121693 - 0.11 11.9 5.5 0.41 10.0 1.2 2.4 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others U71 PF17474.2 ORF121656 - 0.12 12.4 1.1 0.17 11.9 0.1 1.7 2 0 0 2 2 2 0 Tegument protein UL11 homolog MetRS-N PF09635.10 ORF121466 - 0.056 14.0 0.0 0.059 13.9 0.0 1.1 1 0 0 1 1 1 0 MetRS-N binding domain PAS_9 PF13426.7 ORF121439 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF121439 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) GPR15L PF15854.5 ORF121106 - 1.1 9.5 6.5 0.39 11.0 4.3 1.5 2 0 0 2 2 2 0 G-protein coupled receptor ligand 15 Tricho_coat PF05892.11 ORF121006 - 0.025 14.3 0.0 0.029 14.1 0.0 1.2 1 0 0 1 1 1 0 Trichovirus coat protein HMw1_D2 PF18254.1 ORF120996 - 0.062 13.6 0.9 0.54 10.7 0.2 2.0 1 1 1 2 2 2 0 HMW1 domain 2 RmlD_sub_bind PF04321.17 ORF120375 - 0.0027 16.8 0.0 0.0027 16.8 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain PAS_9 PF13426.7 ORF120160 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF2733 PF10813.8 ORF120160 - 0.16 11.7 1.2 0.31 10.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) GHL13 PF14883.6 ORF120076 - 0.036 13.1 0.0 0.04 13.0 0.0 1.0 1 0 0 1 1 1 0 Hypothetical glycosyl hydrolase family 13 G6PD_bact PF10786.9 ORF119397 - 0.095 12.2 2.0 0.11 12.1 2.0 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Kinesin PF00225.23 ORF118752 - 1.1e-15 57.4 0.4 1.2e-15 57.3 0.4 1.0 1 0 0 1 1 1 1 Kinesin motor domain Pox_RNA_pol PF03293.14 ORF118752 - 0.00092 18.9 0.4 0.00092 18.9 0.4 1.1 1 0 0 1 1 1 1 Poxvirus DNA-directed RNA polymerase, 18 kD subunit RA PF00788.23 ORF118752 - 0.0039 17.8 0.1 0.0045 17.6 0.1 1.1 1 0 0 1 1 1 1 Ras association (RalGDS/AF-6) domain GASA PF02704.14 ORF118465 - 0.0083 16.3 0.7 0.0083 16.3 0.7 1.6 2 0 0 2 2 2 1 Gibberellin regulated protein Adeno_E3_15_3 PF03307.14 ORF118074 - 0.16 11.9 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region TMEM52 PF14979.6 ORF117965 - 0.092 12.7 0.0 0.11 12.5 0.0 1.0 1 0 0 1 1 1 0 Transmembrane 52 DHHC PF01529.20 ORF117639 - 0.099 12.8 4.3 0.12 12.5 4.3 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF1700 PF08006.11 ORF117014 - 2.6 7.5 9.4 4.5 6.8 9.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1700) FeThRed_B PF02943.15 ORF116827 - 0.076 13.0 0.2 0.17 11.9 0.2 1.6 1 1 1 2 2 2 0 Ferredoxin thioredoxin reductase catalytic beta chain Curto_V2 PF07325.11 ORF116754 - 0.017 15.0 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Curtovirus V2 protein IL15 PF02372.15 ORF116639 - 0.054 13.5 0.1 0.059 13.4 0.1 1.1 1 0 0 1 1 1 0 Interleukin 15 HYLS1_C PF15311.6 ORF116639 - 0.059 14.1 0.4 0.43 11.3 0.0 2.0 1 1 1 2 2 2 0 Hydrolethalus syndrome protein 1 C-terminus HPS3_N PF14761.6 ORF116639 - 0.068 12.7 0.2 0.08 12.5 0.2 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3 PH_13 PF16652.5 ORF115944 - 0.014 15.2 0.4 0.017 15.0 0.4 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain C2-set PF05790.15 ORF115944 - 0.11 12.7 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Immunoglobulin C2-set domain Imm57 PF15596.6 ORF115743 - 0.12 12.7 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 57 DUF1479 PF07350.12 ORF115359 - 0.12 11.1 0.1 0.13 10.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) Transposase_1 PF01359.18 ORF114110 - 0.025 14.4 0.2 0.039 13.8 0.2 1.2 1 0 0 1 1 1 0 Transposase (partial DDE domain) Use1 PF09753.9 ORF114110 - 0.044 13.5 0.2 0.06 13.1 0.2 1.1 1 0 0 1 1 1 0 Membrane fusion protein Use1 Sgf11 PF08209.11 ORF113267 - 0.12 12.0 2.8 0.38 10.4 0.1 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Glyco_hydro_65m PF03632.15 ORF11269 - 0.063 12.1 0.0 0.065 12.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 65 central catalytic domain DUF3586 PF12131.8 ORF11269 - 0.47 10.7 7.1 0.092 13.0 1.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3586) tRNA-synt_2 PF00152.20 ORF112525 - 0.08 12.0 1.8 0.085 11.9 1.8 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) AD PF09793.9 ORF112429 - 0.025 14.7 0.0 2.2 8.5 0.0 2.1 2 0 0 2 2 2 0 Anticodon-binding domain CRISPR_Cas2 PF09827.9 ORF11213 - 0.097 12.9 0.0 0.15 12.2 0.0 1.5 1 1 0 1 1 1 0 CRISPR associated protein Cas2 zf-4CXXC_R1 PF10497.9 ORF111671 - 0.056 13.7 9.6 0.081 13.2 9.6 1.3 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 DCAF17 PF15802.5 ORF111379 - 0.36 9.5 2.5 0.39 9.4 2.5 1.0 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 17 HRXXH PF13933.6 ORF110828 - 0.11 12.1 1.6 0.13 11.9 1.6 1.0 1 0 0 1 1 1 0 Putative peptidase family CRA PF06589.11 ORF110828 - 0.9 9.7 10.5 0.37 10.9 8.1 1.5 1 1 0 1 1 1 0 Circumsporozoite-related antigen (CRA) PRKCSH-like PF12999.7 ORF110828 - 2.3 8.0 7.6 3.1 7.6 7.6 1.3 1 0 0 1 1 1 0 Glucosidase II beta subunit-like QH-AmDH_gamma PF08992.11 ORF110149 - 0.044 13.8 0.2 0.059 13.4 0.2 1.2 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, gamma subunit ACR_tran PF00873.19 ORF11 - 6.4e-36 123.5 5.5 7e-36 123.3 5.5 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Neurochondrin PF05536.11 ORF10991 - 0.059 11.7 0.0 0.067 11.6 0.0 1.0 1 0 0 1 1 1 0 Neurochondrin RNase_PH_C PF03725.15 ORF108872 - 0.03 14.4 0.2 0.04 14.0 0.2 1.2 1 0 0 1 1 1 0 3' exoribonuclease family, domain 2 tRNA-synt_2 PF00152.20 ORF107426 - 0.08 12.0 1.8 0.085 11.9 1.8 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) Pkinase_Tyr PF07714.17 ORF10727 - 0.0001 21.7 0.2 0.00014 21.2 0.2 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF10727 - 0.00038 19.9 0.0 0.00043 19.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain MukF_M PF17192.4 ORF10727 - 0.12 12.1 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 MukF middle domain Zn_Tnp_IS91 PF14319.6 ORF106278 - 0.0059 16.6 0.9 0.0065 16.5 0.9 1.2 1 0 0 1 1 1 1 Transposase zinc-binding domain Asparaginase_C PF17763.1 ORF106278 - 0.012 15.8 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain CBM53 PF16760.5 ORF106278 - 0.033 14.8 0.1 0.044 14.4 0.1 1.2 1 0 0 1 1 1 0 Starch/carbohydrate-binding module (family 53) DUF2769 PF10967.8 ORF106278 - 0.076 13.7 1.5 0.1 13.3 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2769) ADK_lid PF05191.14 ORF106278 - 0.091 12.8 0.4 0.19 11.7 0.0 1.7 2 0 0 2 2 2 0 Adenylate kinase, active site lid DZR PF12773.7 ORF106278 - 0.17 11.9 2.8 0.42 10.7 2.8 1.7 1 1 0 1 1 1 0 Double zinc ribbon DUF5020 PF16412.5 ORF10554 - 0.14 12.0 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5020) Fe-S_biosyn PF01521.20 ORF104618 - 0.043 14.0 0.5 0.05 13.8 0.5 1.2 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis META PF03724.16 ORF103614 - 0.087 12.8 0.1 0.14 12.1 0.1 1.7 1 1 0 1 1 1 0 META domain SHIPPO-rpt PF07004.12 ORF10347 - 0.0067 17.3 0.0 0.34 11.9 0.0 2.3 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat Med16 PF11635.8 ORF103053 - 0.0078 14.2 1.3 0.008 14.2 1.3 1.0 1 0 0 1 1 1 1 Mediator complex subunit 16 DUF2842 PF11003.8 ORF101467 - 0.74 10.1 10.7 2.4 8.5 1.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2842) META PF03724.16 ORF101319 - 0.087 12.8 0.1 0.14 12.1 0.1 1.7 1 1 0 1 1 1 0 META domain CAAD PF14159.6 NODE_62830_length_259_cov_0.986607_g54889_i0forward_frame_1 - 0.12 12.2 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase F-box PF00646.33 NODE_62829_length_259_cov_1.022321_g54888_i0reverse_frame_1 - 0.55 10.2 5.3 1.9 8.5 1.4 2.3 2 0 0 2 2 2 0 F-box domain Mt_ATP-synt_D PF05873.12 NODE_62828_length_259_cov_1.031250_g54887_i0reverse_frame_1 - 0.018 14.9 2.0 0.02 14.7 2.0 1.1 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) Mfa2 PF08842.10 NODE_62824_length_259_cov_1.066964_g54883_i0forward_frame_1 - 0.012 15.2 2.0 0.014 15.0 2.0 1.0 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 Peptidase_C101 PF16218.5 NODE_62824_length_259_cov_1.066964_g54883_i0forward_frame_1 - 0.064 12.5 0.1 0.073 12.3 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C101 PatG_C PF18065.1 NODE_62809_length_259_cov_1.348214_g54868_i0reverse_frame_1 - 0.0039 17.2 0.0 0.006 16.5 0.0 1.3 1 0 0 1 1 1 1 PatG C-terminal TMEM95 PF15203.6 NODE_62808_length_259_cov_1.348214_g54867_i0forward_frame_1 - 0.024 14.3 4.3 0.028 14.1 4.3 1.1 1 0 0 1 1 1 0 TMEM95 family Rad50_zn_hook PF04423.14 NODE_62808_length_259_cov_1.348214_g54867_i0forward_frame_1 - 0.14 12.0 2.5 0.24 11.3 2.5 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif Sre PF03125.18 NODE_62806_length_259_cov_1.352679_g54865_i0forward_frame_1 - 0.024 13.8 6.3 0.027 13.7 6.3 1.0 1 0 0 1 1 1 0 C. elegans Sre G protein-coupled chemoreceptor GIIM PF08388.11 NODE_62798_length_259_cov_1.424107_g54857_i0reverse_frame_1 - 0.053 13.6 1.5 0.08 13.0 1.5 1.5 1 1 0 1 1 1 0 Group II intron, maturase-specific domain FUN14 PF04930.15 NODE_62787_length_259_cov_1.616071_g54846_i0reverse_frame_1 - 0.054 13.9 0.0 0.071 13.5 0.0 1.1 1 0 0 1 1 1 0 FUN14 family DM PF00751.18 NODE_62785_length_259_cov_1.656250_g54844_i0forward_frame_1 - 0.0079 16.1 4.3 0.016 15.1 4.3 1.5 1 0 0 1 1 1 1 DM DNA binding domain STAG PF08514.11 NODE_62782_length_259_cov_1.687500_g54841_i0reverse_frame_1 - 0.04 13.8 0.3 0.046 13.6 0.3 1.2 1 0 0 1 1 1 0 STAG domain G-7-MTase PF12803.7 NODE_62778_length_259_cov_1.700893_g54837_i0reverse_frame_1 - 0.014 14.6 0.3 0.014 14.6 0.3 1.1 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) zf-LSD1 PF06943.12 NODE_62775_length_259_cov_1.772321_g54834_i0forward_frame_1 - 0.36 10.7 10.8 5.7 6.9 8.0 2.6 2 1 0 2 2 2 0 LSD1 zinc finger Ion_trans PF00520.31 NODE_62771_length_259_cov_1.785714_g54830_i0reverse_frame_1 - 1.2e-05 24.7 2.5 1.4e-05 24.5 2.5 1.0 1 0 0 1 1 1 1 Ion transport protein Uds1 PF15456.6 NODE_62768_length_259_cov_1.834821_g54827_i0reverse_frame_1 - 0.023 14.8 2.6 0.034 14.3 2.6 1.3 1 1 0 1 1 1 0 Up-regulated During Septation Ofd1_CTDD PF10637.9 NODE_62764_length_259_cov_1.883929_g54823_i0forward_frame_1 - 2.3e-12 46.8 0.0 2.5e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Oxoglutarate and iron-dependent oxygenase degradation C-term Stirrup PF09061.6 NODE_62756_length_259_cov_1.968750_g54815_i0reverse_frame_1 - 0.11 12.7 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Stirrup Phage_holin_2_3 PF16080.5 NODE_62756_length_259_cov_1.968750_g54815_i0forward_frame_1 - 0.074 12.8 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage holin family HP1 RecR PF02132.15 NODE_62752_length_259_cov_2.031250_g54811_i0reverse_frame_1 - 0.0097 15.5 0.0 0.025 14.1 0.0 1.7 1 0 0 1 1 1 1 RecR protein SNARE PF05739.19 NODE_62749_length_259_cov_2.093750_g54808_i0reverse_frame_1 - 5.1 7.2 10.3 3.7 7.6 2.3 2.3 2 0 0 2 2 2 0 SNARE domain UPF0180 PF03698.13 NODE_62749_length_259_cov_2.093750_g54808_i0forward_frame_1 - 0.22 11.7 0.6 1.3 9.3 0.1 1.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0180) NOA36 PF06524.12 NODE_62747_length_259_cov_2.183036_g54806_i0reverse_frame_1 - 0.082 12.2 2.2 0.091 12.1 2.2 1.1 1 0 0 1 1 1 0 NOA36 protein Toxin_38 PF14866.6 NODE_62747_length_259_cov_2.183036_g54806_i0forward_frame_1 - 0.006 16.8 0.0 0.01 16.1 0.0 1.4 1 0 0 1 1 1 1 Potassium channel toxin TaqI_C PF12950.7 NODE_62745_length_259_cov_2.209821_g54804_i0reverse_frame_1 - 0.0059 16.7 0.5 0.007 16.4 0.5 1.1 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain zf-RING_5 PF14634.6 NODE_62743_length_259_cov_2.214286_g54802_i0reverse_frame_1 - 0.044 13.8 0.2 0.061 13.3 0.2 1.3 1 0 0 1 1 1 0 zinc-RING finger domain DUF1272 PF06906.11 NODE_62743_length_259_cov_2.214286_g54802_i0forward_frame_1 - 7.7 6.7 13.3 0.7 10.0 4.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) TMEM154 PF15102.6 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 8e-05 22.6 3.1 9.6e-05 22.3 3.1 1.1 1 0 0 1 1 1 1 TMEM154 protein family Glycophorin_A PF01102.18 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.0002 21.5 0.7 0.00023 21.4 0.7 1.0 1 0 0 1 1 1 1 Glycophorin A Podoplanin PF05808.11 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.00066 19.8 6.6 0.00081 19.5 6.6 1.1 1 0 0 1 1 1 1 Podoplanin DUF4711 PF15829.5 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.002 18.1 2.1 0.0022 18.0 2.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4711) MGC-24 PF05283.11 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.005 17.3 6.1 0.0054 17.2 6.1 1.1 1 0 0 1 1 1 1 Multi-glycosylated core protein 24 (MGC-24), sialomucin PIRT PF15099.6 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.042 13.4 1.0 0.053 13.1 1.0 1.3 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family RIFIN PF02009.16 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.045 13.6 0.2 0.055 13.3 0.2 1.1 1 0 0 1 1 1 0 Rifin SSP160 PF06933.11 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.082 11.1 21.4 0.085 11.0 21.4 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Orf78 PF06024.12 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.12 12.7 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Orf78 (ac78) AIF_C PF14721.6 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.13 12.6 0.1 0.23 11.8 0.1 1.5 1 1 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term DUF5383 PF17355.2 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 0.16 12.3 0.1 0.2 12.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5383) FSA_C PF10479.9 NODE_62733_length_259_cov_2.553571_g54792_i0reverse_frame_1 - 2.8 6.0 15.8 2.8 5.9 15.8 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus FMO-like PF00743.19 NODE_62724_length_259_cov_2.803571_g54783_i0reverse_frame_1 - 2.2e-06 26.4 0.0 2.5e-06 26.2 0.0 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like Mqo PF06039.15 NODE_62724_length_259_cov_2.803571_g54783_i0reverse_frame_1 - 0.0017 17.0 0.0 0.0019 16.8 0.0 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) HipA_C PF07804.12 NODE_62724_length_259_cov_2.803571_g54783_i0forward_frame_1 - 0.019 14.7 0.2 0.019 14.6 0.2 1.0 1 0 0 1 1 1 0 HipA-like C-terminal domain DUF5558 PF17713.1 NODE_62720_length_259_cov_3.017857_g54779_i0forward_frame_1 - 0.11 12.9 2.5 1.6 9.1 0.2 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5558) MNSV_P7B PF06692.11 NODE_62719_length_259_cov_3.022321_g54778_i0forward_frame_1 - 0.56 10.2 8.3 0.84 9.7 8.3 1.3 1 0 0 1 1 1 0 Melon necrotic spot virus P7B protein DUF2310 PF10071.9 NODE_62718_length_259_cov_3.156250_g54777_i0forward_frame_1 - 0.0014 18.0 0.1 0.0017 17.7 0.1 1.1 1 0 0 1 1 1 1 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) DUF2733 PF10813.8 NODE_62712_length_259_cov_3.991071_g54771_i0forward_frame_1 - 0.13 12.1 0.6 0.24 11.2 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) DUF2433 PF10360.9 NODE_62698_length_259_cov_30.830357_g54757_i0forward_frame_1 - 0.0023 18.0 0.3 0.0027 17.8 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2433) TMEM100 PF16311.5 NODE_62689_length_259_cov_43.272321_g54748_i0forward_frame_1 - 0.11 12.0 0.4 0.23 11.0 0.4 1.4 1 0 0 1 1 1 0 Transmembrane protein 100 Aph-1 PF06105.12 NODE_62686_length_259_cov_45.062500_g54745_i0forward_frame_1 - 0.13 11.7 2.8 0.15 11.5 2.8 1.0 1 0 0 1 1 1 0 Aph-1 protein KdpC PF02669.15 NODE_62682_length_259_cov_48.535714_g54741_i0reverse_frame_1 - 0.14 12.0 0.3 0.15 11.9 0.3 1.2 1 0 0 1 1 1 0 K+-transporting ATPase, c chain DUF4834 PF16118.5 NODE_62682_length_259_cov_48.535714_g54741_i0reverse_frame_1 - 4 8.5 6.7 4.6 8.3 6.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Herpes_UL52 PF03121.15 NODE_62677_length_259_cov_55.294643_g54736_i0reverse_frame_1 - 0.016 15.2 2.9 0.06 13.3 1.3 2.0 1 1 1 2 2 2 0 Herpesviridae UL52/UL70 DNA primase Pombe_5TM PF09437.10 NODE_62673_length_259_cov_58.821429_g54732_i0forward_frame_1 - 0.14 11.8 3.8 0.16 11.6 3.8 1.1 1 0 0 1 1 1 0 Pombe specific 5TM protein Lipase PF00151.19 NODE_62671_length_259_cov_59.660714_g54730_i0reverse_frame_1 - 0.29 10.4 4.0 0.32 10.3 4.0 1.0 1 0 0 1 1 1 0 Lipase Fanconi_C PF02106.15 NODE_62664_length_259_cov_72.816964_g54723_i0forward_frame_1 - 0.01 14.6 0.2 0.011 14.4 0.2 1.0 1 0 0 1 1 1 0 Fanconi anaemia group C protein CbiC PF02570.15 NODE_62663_length_259_cov_74.116071_g54722_i0reverse_frame_1 - 0.08 12.6 0.0 0.095 12.3 0.0 1.1 1 0 0 1 1 1 0 Precorrin-8X methylmutase DUF2108 PF09881.9 NODE_62661_length_259_cov_75.415179_g54720_i0reverse_frame_1 - 0.002 18.0 0.1 0.0028 17.6 0.1 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2108) zf-Sec23_Sec24 PF04810.15 NODE_62652_length_259_cov_133.508929_g54711_i0reverse_frame_1 - 0.0028 17.7 0.5 0.0028 17.7 0.5 1.5 2 0 0 2 2 2 1 Sec23/Sec24 zinc finger RNA_Me_trans PF04252.13 NODE_62651_length_259_cov_133.959821_g54710_i0forward_frame_1 - 0.0079 15.8 0.3 0.012 15.2 0.2 1.3 1 1 0 1 1 1 1 Predicted SAM-dependent RNA methyltransferase Folate_rec PF03024.14 NODE_62649_length_259_cov_149.959821_g54708_i0forward_frame_1 - 0.0019 18.1 3.5 0.0022 17.9 3.5 1.1 1 0 0 1 1 1 1 Folate receptor family DUF2207 PF09972.9 NODE_62648_length_259_cov_156.053571_g54707_i0reverse_frame_1 - 5 5.8 5.0 5.4 5.7 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) NAR2 PF16974.5 NODE_62646_length_259_cov_161.477679_g54705_i0reverse_frame_1 - 0.05 13.0 0.1 0.066 12.6 0.1 1.2 1 0 0 1 1 1 0 High-affinity nitrate transporter accessory DUF2024 PF09630.10 NODE_62646_length_259_cov_161.477679_g54705_i0reverse_frame_1 - 0.069 13.0 0.4 0.098 12.5 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) DUF4427 PF14468.6 NODE_62635_length_259_cov_731.526786_g54694_i0reverse_frame_1 - 0.21 11.6 0.0 0.26 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4427) ABC_membrane PF00664.23 NODE_62622_length_260_cov_1.066667_g54681_i0forward_frame_1 - 0.00012 21.9 0.0 0.00012 21.9 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Mating_N PF12731.7 NODE_62618_length_260_cov_1.142222_g54677_i0forward_frame_1 - 0.091 12.9 0.0 2 8.6 0.0 2.0 2 0 0 2 2 2 0 Mating-type protein beta 1 Hist_deacetyl PF00850.19 NODE_62610_length_260_cov_1.240000_g54669_i0forward_frame_1 - 0.048 13.1 0.1 2.3 7.6 0.0 1.9 1 1 1 2 2 2 0 Histone deacetylase domain Ion_trans PF00520.31 NODE_62606_length_260_cov_1.266667_g54665_i0reverse_frame_1 - 1.3e-07 31.1 9.1 1.3e-07 31.1 9.1 1.0 1 0 0 1 1 1 1 Ion transport protein CLN3 PF02487.17 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 1.4e-07 30.9 1.4 1.4e-07 30.9 1.4 1.0 1 0 0 1 1 1 1 CLN3 protein DUF4131 PF13567.6 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 0.03 14.0 1.7 0.033 13.8 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Halogen_Hydrol PF10112.9 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 0.1 12.6 2.5 0.12 12.4 2.5 1.1 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein LapA_dom PF06305.11 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 0.12 12.2 2.2 0.25 11.2 2.2 1.6 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Saf_2TM PF18303.1 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 0.21 11.2 4.8 0.66 9.6 0.1 2.0 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain DUF2207 PF09972.9 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_1 - 0.98 8.1 5.8 1.2 7.8 5.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2163 PF09931.9 NODE_62591_length_260_cov_1.422222_g54650_i0forward_frame_1 - 0.13 12.5 0.1 0.24 11.6 0.0 1.4 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2163) Peptidase_M18 PF02127.15 NODE_62590_length_260_cov_1.426667_g54649_i0reverse_frame_1 - 0.16 10.7 0.1 0.18 10.5 0.1 1.0 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) Ribosomal_L21p PF00829.21 NODE_62587_length_260_cov_1.466667_g54646_i0reverse_frame_1 - 0.078 13.2 0.1 0.13 12.5 0.1 1.4 1 1 1 2 2 2 0 Ribosomal prokaryotic L21 protein KCH PF16944.5 NODE_62582_length_260_cov_1.515556_g54641_i0reverse_frame_1 - 0.064 13.0 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 Fungal potassium channel # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks306.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks306.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks306.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks306.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:21:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2052 PF09747.9 NODE_62579_length_260_cov_1.524444_g54638_i0forward_frame_1 - 0.029 14.5 8.2 0.035 14.2 8.2 1.0 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) Connexin PF00029.19 NODE_62579_length_260_cov_1.524444_g54638_i0forward_frame_1 - 1.6 8.5 5.2 1.7 8.4 5.2 1.1 1 0 0 1 1 1 0 Connexin Eapp_C PF10238.9 NODE_62579_length_260_cov_1.524444_g54638_i0forward_frame_1 - 2.3 8.3 6.4 2.9 8.0 6.4 1.2 1 0 0 1 1 1 0 E2F-associated phosphoprotein RR_TM4-6 PF06459.12 NODE_62579_length_260_cov_1.524444_g54638_i0forward_frame_1 - 5.5 6.7 8.7 6 6.6 8.7 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 NODE_62579_length_260_cov_1.524444_g54638_i0forward_frame_1 - 9.6 4.8 8.8 11 4.7 8.8 1.0 1 0 0 1 1 1 0 Presenilin Adhesin_P1 PF03257.13 NODE_62570_length_260_cov_1.600000_g54629_i0forward_frame_1 - 0.0085 16.6 0.5 0.011 16.3 0.5 1.1 1 0 0 1 1 1 1 Mycoplasma adhesin P1 Beta_helix PF13229.6 NODE_62568_length_260_cov_1.653333_g54627_i0reverse_frame_1 - 3.4e-08 33.5 0.6 3.5e-08 33.5 0.6 1.0 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_62568_length_260_cov_1.653333_g54627_i0reverse_frame_1 - 2.3e-06 27.0 0.1 2.3e-06 27.0 0.1 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) JmjC PF02373.22 NODE_62567_length_260_cov_1.680000_g54626_i0reverse_frame_1 - 0.11 13.0 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 JmjC domain, hydroxylase HEAT PF02985.22 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.00075 19.5 0.1 0.0026 17.9 0.1 1.9 2 0 0 2 2 2 1 HEAT repeat HEAT_EZ PF13513.6 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.0013 19.2 0.0 0.0025 18.3 0.0 1.4 1 0 0 1 1 1 1 HEAT-like repeat DUF1351 PF07083.11 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.0054 16.5 0.3 0.0059 16.4 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1351) Cnd1 PF12717.7 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.0066 16.5 0.1 0.0069 16.4 0.1 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.016 15.6 0.0 0.019 15.3 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats RTP1_C1 PF10363.9 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.018 15.2 0.0 0.02 15.0 0.0 1.0 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 Adaptin_N PF01602.20 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.036 12.6 0.0 0.039 12.5 0.0 1.1 1 0 0 1 1 1 0 Adaptin N terminal region RasGEF_N_2 PF14663.6 NODE_62566_length_260_cov_1.697778_g54625_i0forward_frame_1 - 0.049 14.0 0.0 0.056 13.9 0.0 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Defensin_beta_2 PF13841.6 NODE_62557_length_260_cov_1.857778_g54616_i0reverse_frame_1 - 0.68 10.5 4.5 0.43 11.1 1.3 2.2 2 0 0 2 2 2 0 Beta defensin Med21 PF11221.8 NODE_62550_length_260_cov_1.955556_g54609_i0forward_frame_1 - 0.035 14.4 4.6 0.043 14.1 4.6 1.2 1 0 0 1 1 1 0 Subunit 21 of Mediator complex LRR_4 PF12799.7 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 3.2e-08 33.7 1.5 7.1e-07 29.5 0.5 2.3 1 1 1 2 2 2 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 3e-06 26.9 0.2 7.3e-06 25.7 0.2 1.7 1 0 0 1 1 1 1 Leucine rich repeat LRR_9 PF14580.6 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 0.00022 20.8 0.1 0.00026 20.6 0.1 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_6 PF13516.6 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 0.11 12.6 0.8 0.44 10.7 0.1 2.3 3 0 0 3 3 3 0 Leucine Rich repeat LRR_1 PF00560.33 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_1 - 0.13 12.9 1.0 4.9 8.1 0.1 2.9 2 1 0 2 2 2 0 Leucine Rich Repeat Molybdopterin_N PF18364.1 NODE_62547_length_260_cov_2.075556_g54606_i0forward_frame_1 - 0.078 13.0 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin oxidoreductase N-terminal domain ABC2_membrane PF01061.24 NODE_62546_length_260_cov_2.106667_g54605_i0forward_frame_1 - 6.4e-07 29.0 0.1 6.8e-07 28.9 0.1 1.0 1 0 0 1 1 1 1 ABC-2 type transporter DUF3287 PF11690.8 NODE_62538_length_260_cov_2.253333_g54597_i0forward_frame_1 - 0.036 13.8 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) DIM1 PF02966.16 NODE_62537_length_260_cov_2.262222_g54596_i0reverse_frame_1 - 0.02 14.6 0.0 0.022 14.6 0.0 1.3 1 1 0 1 1 1 0 Mitosis protein DIM1 Vac7 PF12751.7 NODE_62530_length_260_cov_2.333333_g54589_i0reverse_frame_1 - 2.6 7.4 4.6 3 7.2 4.6 1.1 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 TcdB_N PF12918.7 NODE_62530_length_260_cov_2.333333_g54589_i0forward_frame_1 - 0.0075 16.5 1.4 0.014 15.7 1.1 1.6 2 0 0 2 2 2 1 TcdB toxin N-terminal helical domain FliJ PF02050.16 NODE_62530_length_260_cov_2.333333_g54589_i0forward_frame_1 - 0.055 13.7 1.3 0.067 13.4 1.3 1.2 1 0 0 1 1 1 0 Flagellar FliJ protein APC_r PF05923.12 NODE_62527_length_260_cov_2.440000_g54586_i0reverse_frame_1 - 0.07 12.9 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 APC repeat Arm_vescicular PF18770.1 NODE_62525_length_260_cov_2.488889_g54584_i0forward_frame_1 - 0.023 14.6 1.4 0.2 11.6 0.8 2.1 2 0 0 2 2 2 0 Armadillo tether-repeat of vescicular transport factor Penicil_amidase PF01804.18 NODE_62524_length_260_cov_2.502222_g54583_i0forward_frame_1 - 4.7e-13 49.0 0.0 5.3e-13 48.8 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase Na_H_antiport_1 PF06965.12 NODE_62523_length_260_cov_2.528889_g54582_i0forward_frame_1 - 2.2e-39 135.4 3.0 2.3e-39 135.3 3.0 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 TMEM239 PF15841.5 NODE_62523_length_260_cov_2.528889_g54582_i0forward_frame_1 - 0.054 13.4 0.2 0.075 12.9 0.2 1.4 1 1 0 1 1 1 0 Transmembrane protein 239 family SecD_SecF PF02355.16 NODE_62523_length_260_cov_2.528889_g54582_i0forward_frame_1 - 0.084 12.2 0.2 0.092 12.1 0.2 1.2 1 0 0 1 1 1 0 Protein export membrane protein DUF420 PF04238.12 NODE_62518_length_260_cov_2.662222_g54577_i0forward_frame_1 - 0.0026 18.0 0.4 0.0029 17.9 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF420) Phage_Coat_A PF05357.13 NODE_62517_length_260_cov_2.684444_g54576_i0forward_frame_1 - 0.08 12.7 0.2 0.22 11.4 0.1 1.7 2 0 0 2 2 2 0 Phage Coat Protein A CCAP PF11105.8 NODE_62514_length_260_cov_2.791111_g54573_i0forward_frame_1 - 0.021 14.8 0.2 0.024 14.6 0.2 1.0 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a PAP2 PF01569.21 NODE_62510_length_260_cov_2.857778_g54569_i0reverse_frame_1 - 7.3e-07 29.0 1.0 7.3e-07 29.0 1.0 1.8 2 0 0 2 2 2 1 PAP2 superfamily Pex24p PF06398.11 NODE_62510_length_260_cov_2.857778_g54569_i0reverse_frame_1 - 0.016 14.2 0.9 0.016 14.2 0.9 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Ge1_WD40 PF16529.5 NODE_62506_length_260_cov_2.964444_g54565_i0reverse_frame_1 - 0.0051 15.8 0.0 0.0051 15.8 0.0 1.1 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Cellulose_synt PF03552.14 NODE_62506_length_260_cov_2.964444_g54565_i0forward_frame_1 - 0.15 10.6 1.1 0.14 10.6 1.1 1.1 1 0 0 1 1 1 0 Cellulose synthase ADAM_CR_2 PF17771.1 NODE_62502_length_260_cov_3.151111_g54561_i0reverse_frame_1 - 0.93 10.1 8.9 0.51 10.9 7.2 1.4 1 1 0 1 1 1 0 ADAM cysteine-rich domain DUF2672 PF10878.8 NODE_62500_length_260_cov_3.480000_g54559_i0forward_frame_1 - 0.078 12.9 0.2 0.098 12.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2672) ADAM_CR PF08516.12 NODE_62499_length_260_cov_3.502222_g54558_i0forward_frame_1 - 0.11 12.9 5.7 0.79 10.1 1.1 2.1 1 1 1 2 2 2 0 ADAM cysteine-rich DUF3439 PF11921.8 NODE_62497_length_260_cov_3.582222_g54556_i0reverse_frame_1 - 1.7 8.7 11.5 2 8.4 11.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) ARL17 PF15840.5 NODE_62493_length_260_cov_4.320000_g54552_i0forward_frame_1 - 0.0022 18.3 0.2 0.0033 17.8 0.2 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor-like protein 17 Gamma_PGA_hydro PF05908.11 NODE_62493_length_260_cov_4.320000_g54552_i0forward_frame_1 - 0.045 13.2 0.0 0.056 12.8 0.0 1.0 1 0 0 1 1 1 0 Poly-gamma-glutamate hydrolase ALC PF17527.2 NODE_62493_length_260_cov_4.320000_g54552_i0forward_frame_1 - 0.085 12.5 0.5 0.1 12.2 0.5 1.1 1 0 0 1 1 1 0 Phage ALC protein DUF728 PF05304.12 NODE_62489_length_260_cov_33.208889_g54548_i0reverse_frame_1 - 0.012 15.5 4.7 0.015 15.2 4.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF728) DUF2304 PF10066.9 NODE_62488_length_260_cov_35.168889_g54547_i0forward_frame_1 - 4.3 7.6 6.0 2.6 8.3 1.4 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Peptidase_C2 PF00648.21 NODE_62486_length_260_cov_37.186667_g54545_i0reverse_frame_1 - 8.4e-15 54.6 0.0 9.1e-15 54.4 0.0 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Mso1_Sec1_bdg PF14475.6 NODE_62484_length_260_cov_40.791111_g54543_i0forward_frame_1 - 0.12 12.0 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Sec1-binding region of Mso1 zf-RING_11 PF17123.5 NODE_62484_length_260_cov_40.791111_g54543_i0forward_frame_1 - 0.12 12.1 0.2 0.31 10.8 0.2 1.7 1 0 0 1 1 1 0 RING-like zinc finger RVT_2 PF07727.14 NODE_62481_length_260_cov_45.635556_g54540_i0reverse_frame_1 - 0.038 13.6 0.0 0.046 13.4 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Ten1_2 PF15490.6 NODE_62480_length_260_cov_46.613333_g54539_i0reverse_frame_1 - 9.8e-08 31.7 0.5 1.2e-07 31.4 0.5 1.1 1 0 0 1 1 1 1 Telomere-capping, CST complex subunit Herpes_Helicase PF02689.14 NODE_62480_length_260_cov_46.613333_g54539_i0forward_frame_1 - 0.11 10.5 0.0 0.11 10.5 0.0 1.1 1 0 0 1 1 1 0 Helicase DUF321 PF03778.13 NODE_62476_length_260_cov_53.937778_g54535_i0reverse_frame_1 - 0.17 11.5 0.1 0.17 11.5 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF321) US22 PF02393.16 NODE_62472_length_260_cov_57.222222_g54531_i0reverse_frame_1 - 0.098 12.9 0.5 0.11 12.8 0.5 1.0 1 0 0 1 1 1 0 US22 like LpxC PF03331.13 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_1 - 0.048 13.1 0.0 0.053 13.0 0.0 1.0 1 0 0 1 1 1 0 UDP-3-O-acyl N-acetylglycosamine deacetylase TetR_C_33 PF13305.6 NODE_62465_length_260_cov_65.586667_g54524_i0forward_frame_1 - 0.029 15.1 0.3 0.034 14.9 0.3 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain IIGP PF05049.13 NODE_62462_length_260_cov_69.208889_g54521_i0reverse_frame_1 - 9.6e-05 21.6 0.0 0.00011 21.4 0.0 1.0 1 0 0 1 1 1 1 Interferon-inducible GTPase (IIGP) DotA PF11388.8 NODE_62453_length_260_cov_87.897778_g54512_i0forward_frame_1 - 0.077 13.2 0.1 0.09 13.0 0.1 1.1 1 0 0 1 1 1 0 Phagosome trafficking protein DotA Lustrin_cystein PF14625.6 NODE_62452_length_260_cov_88.115556_g54511_i0forward_frame_1 - 0.23 11.9 8.6 0.081 13.3 6.0 1.6 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain CxC5 PF18718.1 NODE_62448_length_260_cov_93.288889_g54507_i0reverse_frame_1 - 0.075 13.1 1.8 0.11 12.6 1.8 1.2 1 0 0 1 1 1 0 CxC5 like cysteine cluster associated with KDZ transposases Zemlya PF17646.1 NODE_62448_length_260_cov_93.288889_g54507_i0forward_frame_1 - 0.0069 16.7 0.0 0.0086 16.4 0.0 1.1 1 0 0 1 1 1 1 Closterovirus 1a polyprotein central region ABC_tran PF00005.27 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 9.4e-16 58.6 0.1 1.1e-15 58.4 0.1 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.00049 20.0 0.1 0.00062 19.7 0.1 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.00061 19.5 0.1 0.00081 19.1 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.00071 19.6 0.0 0.00087 19.4 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.00079 20.0 0.2 0.001 19.6 0.2 1.2 1 0 0 1 1 1 1 AAA domain DUF87 PF01935.17 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.0018 18.4 0.1 0.0024 18.0 0.1 1.1 1 0 0 1 1 1 1 Helicase HerA, central domain SMC_N PF02463.19 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.008 15.6 0.0 0.0095 15.4 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.011 16.2 0.0 0.011 16.2 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.015 15.0 0.3 0.018 14.7 0.3 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_30 PF13604.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.02 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.02 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain NB-ARC PF00931.22 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.031 13.5 0.1 0.032 13.4 0.1 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_15 PF13175.6 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.041 13.6 0.2 0.041 13.6 0.2 1.1 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.046 13.6 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase AAA_7 PF12775.7 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.062 12.8 0.0 0.078 12.5 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region FtsK_SpoIIIE PF01580.18 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.072 12.4 0.0 0.072 12.4 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family MeaB PF03308.16 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.089 11.8 0.1 0.091 11.7 0.1 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TrwB_AAD_bind PF10412.9 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.098 11.6 0.4 0.12 11.3 0.4 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DUF815 PF05673.13 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.11 11.7 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) IIGP PF05049.13 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.13 11.2 0.1 0.13 11.2 0.1 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) Roc PF08477.13 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.17 12.1 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.18 11.9 0.1 0.24 11.4 0.1 1.1 1 0 0 1 1 1 0 Dynamin family Gtr1_RagA PF04670.12 NODE_62446_length_260_cov_101.328889_g54505_i0forward_frame_1 - 0.19 11.0 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region DUF1668 PF07893.13 NODE_62443_length_260_cov_111.217778_g54502_i0reverse_frame_1 - 0.04 13.3 0.9 0.042 13.2 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1668) GerE PF00196.19 NODE_62434_length_260_cov_190.937778_g54493_i0reverse_frame_1 - 0.0094 15.5 0.6 0.022 14.3 0.2 1.7 1 1 1 2 2 2 1 Bacterial regulatory proteins, luxR family LNS2 PF08235.13 NODE_62432_length_260_cov_216.191111_g54491_i0forward_frame_1 - 0.02 14.4 0.5 0.022 14.2 0.5 1.1 1 0 0 1 1 1 0 LNS2 (Lipin/Ned1/Smp2) Yos1 PF08571.10 NODE_62429_length_260_cov_290.133333_g44727_i1forward_frame_1 - 3.4e-17 62.5 0.0 4.2e-17 62.2 0.0 1.1 1 0 0 1 1 1 1 Yos1-like ecTbetaR2 PF08917.10 NODE_62428_length_260_cov_343.244444_g54488_i0reverse_frame_1 - 0.12 12.4 1.6 0.14 12.1 1.6 1.1 1 0 0 1 1 1 0 Transforming growth factor beta receptor 2 ectodomain Hemopexin PF00045.19 NODE_62424_length_260_cov_976.804444_g54484_i0reverse_frame_1 - 0.023 14.6 1.8 2.2 8.3 0.1 2.3 2 0 0 2 2 2 0 Hemopexin Tubulin_C PF03953.17 NODE_62419_length_260_cov_5627.622222_g54479_i0forward_frame_1 - 3.1e-30 104.9 0.0 3.3e-30 104.8 0.0 1.0 1 0 0 1 1 1 1 Tubulin C-terminal domain NADHdh-2_N PF12155.8 NODE_62415_length_261_cov_1.061947_g54475_i0reverse_frame_1 - 0.11 12.9 0.7 0.15 12.5 0.7 1.1 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 N-terminal DUF374 PF04028.13 NODE_62412_length_261_cov_1.207965_g54472_i0reverse_frame_1 - 0.035 13.7 0.0 0.046 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF374) ACDC PF14733.6 NODE_62411_length_261_cov_1.207965_g54471_i0forward_frame_1 - 0.045 14.1 0.1 0.058 13.7 0.1 1.1 1 0 0 1 1 1 0 AP2-coincident C-terminal 7TM_transglut PF14402.6 NODE_62410_length_261_cov_1.221239_g54470_i0reverse_frame_1 - 0.021 14.3 3.5 0.023 14.2 3.5 1.0 1 0 0 1 1 1 0 7 transmembrane helices usually fused to an inactive transglutaminase Polyoma_agno PF01736.16 NODE_62405_length_261_cov_1.278761_g54465_i0reverse_frame_1 - 0.18 11.6 0.4 0.29 10.9 0.4 1.4 1 0 0 1 1 1 0 Polyomavirus agnoprotein YhcG_C PF06250.11 NODE_62404_length_261_cov_1.296460_g54464_i0reverse_frame_1 - 0.00032 20.5 0.9 0.0004 20.2 0.9 1.1 1 0 0 1 1 1 1 YhcG PDDEXK nuclease domain DUF1921 PF09081.10 NODE_62399_length_261_cov_1.384956_g54459_i0forward_frame_1 - 0.075 13.3 0.2 0.12 12.6 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1921) RepC PF06504.11 NODE_62397_length_261_cov_1.398230_g54457_i0forward_frame_1 - 0.082 12.1 0.0 0.099 11.8 0.0 1.1 1 0 0 1 1 1 0 Replication protein C (RepC) Dynein_IC2 PF11540.8 NODE_62395_length_261_cov_1.464602_g54455_i0reverse_frame_1 - 0.096 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Cytoplasmic dynein 1 intermediate chain 2 Ank_4 PF13637.6 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 6.7e-14 52.1 1.0 2.3e-10 40.8 0.1 1.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 2.4e-12 46.8 0.1 6.8e-07 29.5 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 1.1e-11 45.1 0.1 1.4e-11 44.8 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 8.9e-10 38.0 0.1 0.0033 17.8 0.0 2.8 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 NODE_62391_length_261_cov_1.526549_g54451_i0forward_frame_1 - 1.6e-08 34.6 0.1 0.00057 20.2 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Orbi_VP1 PF05788.12 NODE_62385_length_261_cov_1.588496_g54445_i0reverse_frame_1 - 0.014 13.1 0.1 0.014 13.0 0.1 1.0 1 0 0 1 1 1 0 Orbivirus RNA-dependent RNA polymerase (VP1) Peptidase_C48 PF02902.19 NODE_62372_length_261_cov_1.827434_g54432_i0forward_frame_1 - 0.037 13.8 0.6 0.038 13.8 0.6 1.1 1 0 0 1 1 1 0 Ulp1 protease family, C-terminal catalytic domain DUF2207 PF09972.9 NODE_62372_length_261_cov_1.827434_g54432_i0forward_frame_1 - 0.17 10.6 0.9 0.2 10.4 0.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Scm3 PF10384.9 NODE_62372_length_261_cov_1.827434_g54432_i0forward_frame_1 - 0.34 10.7 1.1 0.51 10.1 1.1 1.3 1 0 0 1 1 1 0 Centromere protein Scm3 DUF1129 PF06570.11 NODE_62360_length_261_cov_2.035398_g54420_i0reverse_frame_1 - 0.0066 16.0 0.0 0.0075 15.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) KdpC PF02669.15 NODE_62351_length_261_cov_2.203540_g54411_i0forward_frame_1 - 2.5e-27 95.9 0.0 2.7e-27 95.8 0.0 1.0 1 0 0 1 1 1 1 K+-transporting ATPase, c chain OapA_N PF08525.11 NODE_62349_length_261_cov_2.283186_g54409_i0forward_frame_1 - 0.25 11.3 5.6 0.43 10.6 2.0 2.3 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif Peptidase_S66C PF17676.1 NODE_62342_length_261_cov_2.380531_g54402_i0forward_frame_1 - 6.5e-09 36.4 0.0 7.4e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 LD-carboxypeptidase C-terminal domain Glyco_hydro_42C PF08533.10 NODE_62342_length_261_cov_2.380531_g54402_i0forward_frame_1 - 0.076 12.8 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain GRASP55_65 PF04495.14 NODE_62336_length_261_cov_2.429204_g54396_i0forward_frame_1 - 4.3e-10 40.0 0.0 4.7e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain PDZ_2 PF13180.6 NODE_62336_length_261_cov_2.429204_g54396_i0forward_frame_1 - 0.091 13.1 0.1 0.15 12.4 0.1 1.5 1 1 0 1 1 1 0 PDZ domain Usher PF00577.20 NODE_62333_length_261_cov_2.570796_g54393_i0forward_frame_1 - 3.3e-31 108.8 0.4 3.6e-31 108.7 0.4 1.0 1 0 0 1 1 1 1 Outer membrane usher protein DUF945 PF06097.11 NODE_62330_length_261_cov_2.623894_g54390_i0reverse_frame_1 - 6.8e-18 65.0 1.6 7.8e-18 64.8 1.6 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF945) TAT_signal PF10518.9 NODE_62324_length_261_cov_2.676991_g54384_i0reverse_frame_1 - 0.0035 17.1 0.0 0.0054 16.5 0.0 1.3 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence UCR_Fe-S_N PF10399.9 NODE_62324_length_261_cov_2.676991_g54384_i0reverse_frame_1 - 0.04 13.3 0.0 0.071 12.5 0.0 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Homeodomain PF00046.29 NODE_62324_length_261_cov_2.676991_g54384_i0reverse_frame_1 - 0.085 12.7 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Homeodomain Lipocalin_2 PF08212.12 NODE_62322_length_261_cov_2.690265_g54382_i0reverse_frame_1 - 1.1e-06 28.7 0.1 1.4e-06 28.3 0.1 1.2 1 0 0 1 1 1 1 Lipocalin-like domain preSET_CXC PF18264.1 NODE_62322_length_261_cov_2.690265_g54382_i0forward_frame_1 - 5.9 7.5 10.1 0.28 11.7 2.6 2.3 2 1 0 2 2 2 0 CXC domain DUF1351 PF07083.11 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.00043 20.1 1.3 0.0099 15.7 1.0 1.9 1 1 1 2 2 2 2 Protein of unknown function (DUF1351) DUF4200 PF13863.6 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.0043 17.4 0.4 0.0055 17.1 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) Coagulase PF08764.10 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.0078 16.4 0.5 0.0085 16.3 0.5 1.1 1 0 0 1 1 1 1 Staphylococcus aureus coagulase KapB PF08810.10 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.02 15.0 0.5 0.043 14.0 0.5 1.5 1 1 1 2 2 2 0 Kinase associated protein B Cauli_AT PF03233.13 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.032 14.1 1.4 0.042 13.8 1.4 1.3 1 1 0 1 1 1 0 Aphid transmission protein RPN7 PF10602.9 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.051 13.3 0.4 0.072 12.8 0.4 1.2 1 0 0 1 1 1 0 26S proteasome subunit RPN7 Filo_VP35 PF02097.15 NODE_62321_length_261_cov_2.699115_g54381_i0forward_frame_1 - 0.073 12.1 0.0 0.078 12.0 0.0 1.0 1 0 0 1 1 1 0 Filoviridae VP35 Aa_trans PF01490.18 NODE_62320_length_261_cov_2.752212_g54380_i0forward_frame_1 - 4e-12 45.6 1.9 4.2e-12 45.5 1.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein tRNA-synt_2_TM PF16995.5 NODE_62320_length_261_cov_2.752212_g54380_i0forward_frame_1 - 0.0054 16.5 0.3 0.0065 16.2 0.3 1.1 1 0 0 1 1 1 1 Transmembrane region of lysyl-tRNA synthetase DUF202 PF02656.15 NODE_62320_length_261_cov_2.752212_g54380_i0forward_frame_1 - 0.026 15.0 0.2 0.045 14.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF202) ZYG-11_interact PF05884.12 NODE_62316_length_261_cov_2.845133_g54376_i0reverse_frame_1 - 0.00013 21.5 0.0 0.00015 21.3 0.0 1.0 1 0 0 1 1 1 1 Interactor of ZYG-11 GGA_N-GAT PF18308.1 NODE_62316_length_261_cov_2.845133_g54376_i0reverse_frame_1 - 0.0079 15.8 0.2 0.015 14.9 0.2 1.5 1 0 0 1 1 1 1 GGA N-GAT domain DUF2491 PF10679.9 NODE_62315_length_261_cov_2.862832_g54375_i0forward_frame_1 - 1.1e-10 41.1 0.0 1.2e-10 40.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2491) YqbF PF14553.6 NODE_62315_length_261_cov_2.862832_g54375_i0forward_frame_1 - 0.09 12.7 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 YqbF, hypothetical protein domain Spo7_2_N PF15407.6 NODE_62313_length_261_cov_3.115044_g54373_i0forward_frame_1 - 0.19 11.4 0.0 0.35 10.5 0.0 1.4 2 0 0 2 2 2 0 Sporulation protein family 7 MGC-24 PF05283.11 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_1 - 0.95 9.9 24.8 1.3 9.5 24.8 1.2 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin CCDC53 PF10152.9 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_1 - 3.2 8.2 7.1 3.7 7.9 7.1 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex DUF4781 PF16013.5 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_1 - 4.3 6.0 6.9 5 5.8 6.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) TMEM171 PF15471.6 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_1 - 4.6 6.1 7.1 5 6.0 7.1 1.1 1 0 0 1 1 1 0 Transmembrane protein family 171 FAP PF07174.11 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_1 - 5.2 6.4 25.8 5.6 6.3 25.8 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) FAST_1 PF06743.15 NODE_62307_length_261_cov_3.508850_g54367_i0forward_frame_1 - 0.15 12.0 1.5 0.27 11.2 0.6 1.9 1 1 2 3 3 3 0 FAST kinase-like protein, subdomain 1 MBOAT_2 PF13813.6 NODE_62305_length_261_cov_3.628319_g54365_i0forward_frame_1 - 0.0039 17.4 0.9 0.006 16.8 0.9 1.5 1 1 0 1 1 1 1 Membrane bound O-acyl transferase family RVT_2 PF07727.14 NODE_62302_length_261_cov_5.920354_g54362_i0reverse_frame_1 - 0.032 13.9 0.0 0.035 13.8 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Selenoprotein_S PF06936.11 NODE_62302_length_261_cov_5.920354_g54362_i0forward_frame_1 - 0.3 10.9 0.2 0.35 10.7 0.2 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) C12orf66_like PF09404.10 NODE_62301_length_261_cov_11.951327_g54361_i0reverse_frame_1 - 0.22 10.3 0.0 0.25 10.1 0.0 1.0 1 0 0 1 1 1 0 KICSTOR complex C12orf66 like DAG_kinase_N PF14513.6 NODE_62298_length_261_cov_37.256637_g54358_i0reverse_frame_1 - 0.12 12.6 1.4 0.14 12.3 1.4 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus DUF2615 PF11027.8 NODE_62298_length_261_cov_37.256637_g54358_i0forward_frame_1 - 0.024 14.8 0.2 0.028 14.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) Phage_holin_2_3 PF16080.5 NODE_62298_length_261_cov_37.256637_g54358_i0forward_frame_1 - 0.071 12.9 0.2 0.12 12.1 0.2 1.5 1 0 0 1 1 1 0 Bacteriophage holin family HP1 CRA PF06589.11 NODE_62297_length_261_cov_40.358407_g54357_i0reverse_frame_1 - 0.22 11.7 0.0 0.27 11.3 0.0 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) DHC_N2 PF08393.13 NODE_62296_length_261_cov_40.429204_g54356_i0forward_frame_1 - 1.6 7.8 3.2 1.7 7.6 3.2 1.1 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 2 DUF4714 PF15833.5 NODE_62290_length_261_cov_47.389381_g54350_i0reverse_frame_1 - 0.017 15.1 1.7 0.019 14.9 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) Bowman-Birk_leg PF00228.20 NODE_62288_length_261_cov_48.867257_g54348_i0reverse_frame_1 - 0.067 13.6 0.5 0.16 12.4 0.5 1.7 1 0 0 1 1 1 0 Bowman-Birk serine protease inhibitor family PH_15 PF17339.2 NODE_62288_length_261_cov_48.867257_g54348_i0reverse_frame_1 - 0.15 12.0 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 PH domain AAA_29 PF13555.6 NODE_62287_length_261_cov_51.283186_g54347_i0forward_frame_1 - 0.13 12.0 0.3 0.2 11.4 0.3 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain TT_ORF2 PF02957.15 NODE_62287_length_261_cov_51.283186_g54347_i0forward_frame_1 - 0.21 12.5 1.5 0.28 12.1 1.3 1.3 1 1 0 1 1 1 0 TT viral ORF2 PDR_CDR PF06422.12 NODE_62285_length_261_cov_54.199115_g54345_i0forward_frame_1 - 3.2 7.7 7.4 0.36 10.8 2.4 1.9 1 1 1 2 2 2 0 CDR ABC transporter CNDH2_N PF06278.11 NODE_62284_length_261_cov_54.367257_g54344_i0reverse_frame_1 - 0.051 13.8 0.4 0.061 13.5 0.4 1.3 1 1 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, N-terminal Cas6b_C PF17262.2 NODE_62284_length_261_cov_54.367257_g54344_i0reverse_frame_1 - 0.11 12.7 0.2 0.13 12.4 0.2 1.1 1 0 0 1 1 1 0 Cas6b C-terminal domain Mitochondr_Som1 PF11093.8 NODE_62281_length_261_cov_59.238938_g54341_i0reverse_frame_1 - 0.026 14.5 0.3 0.03 14.3 0.3 1.3 1 0 0 1 1 1 0 Mitochondrial export protein Som1 Spore_YabQ PF09578.10 NODE_62279_length_261_cov_60.977876_g54339_i0forward_frame_1 - 0.058 13.6 3.0 0.082 13.1 3.0 1.2 1 0 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) TFIIB_C_1 PF18542.1 NODE_62269_length_261_cov_91.159292_g54329_i0forward_frame_1 - 0.1 12.6 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 DUF777 PF05606.11 NODE_62266_length_261_cov_107.641593_g54326_i0reverse_frame_1 - 0.062 13.1 3.5 0.063 13.0 1.2 1.8 1 1 1 2 2 2 0 Borrelia burgdorferi protein of unknown function (DUF777) Secapin PF17521.2 NODE_62260_length_261_cov_121.938053_g54320_i0reverse_frame_1 - 0.033 14.0 0.2 0.048 13.5 0.2 1.3 1 0 0 1 1 1 0 Honey bee peptides Raftlin PF15250.6 NODE_62257_length_261_cov_162.867257_g54317_i0forward_frame_1 - 0.066 11.9 0.0 0.072 11.8 0.0 1.0 1 0 0 1 1 1 0 Raftlin CoiA PF06054.11 NODE_62241_length_262_cov_0.973568_g54301_i0forward_frame_3 - 0.0049 16.0 0.8 0.0052 16.0 0.8 1.0 1 0 0 1 1 1 1 Competence protein CoiA-like family Tn7_Tnp_TnsA_N PF08722.11 NODE_62241_length_262_cov_0.973568_g54301_i0forward_frame_3 - 0.01 16.0 0.3 0.012 15.8 0.3 1.2 1 0 0 1 1 1 1 TnsA endonuclease N terminal WT1 PF02165.15 NODE_62234_length_262_cov_1.101322_g54294_i0forward_frame_3 - 0.051 12.8 1.0 0.055 12.7 1.0 1.1 1 0 0 1 1 1 0 Wilm's tumour protein zf-CCCH_4 PF18044.1 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 4.4e-05 23.2 4.5 5.9e-05 22.8 4.5 1.2 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 0.00017 21.5 3.2 0.00083 19.3 3.2 1.9 1 1 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 0.0017 18.2 4.0 0.0024 17.7 4.0 1.2 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 0.017 15.5 1.9 0.025 15.0 1.9 1.2 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Torus PF16131.5 NODE_62233_length_262_cov_1.114537_g54293_i0forward_frame_3 - 0.022 15.4 0.1 0.025 15.3 0.1 1.2 1 0 0 1 1 1 0 Torus domain PSA_CBD PF18341.1 NODE_62230_length_262_cov_1.215859_g54290_i0forward_frame_3 - 0.089 12.8 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 PSA endolysin C-terminal cell wall binding domain Arteri_nsp7a PF16749.5 NODE_62229_length_262_cov_1.233480_g54289_i0reverse_frame_2 - 0.054 13.7 0.0 0.065 13.4 0.0 1.1 1 0 0 1 1 1 0 Arterivirus nonstructural protein 7 alpha His_Me_b4a2 PF18275.1 NODE_62223_length_262_cov_1.383260_g54283_i0forward_frame_3 - 0.086 12.9 1.3 0.086 12.9 1.3 2.0 2 0 0 2 2 2 0 His-Me finger endonuclease beta4-alpha2 domain zf-HYPF PF07503.12 NODE_62221_length_262_cov_1.396476_g54281_i0forward_frame_3 - 0.027 14.3 2.2 0.64 9.8 0.1 2.6 2 1 1 3 3 3 0 HypF finger Mob1_phocein PF03637.17 NODE_62217_length_262_cov_1.409692_g54277_i0reverse_frame_2 - 0.061 13.3 3.4 0.077 13.0 3.4 1.1 1 0 0 1 1 1 0 Mob1/phocein family Dev_Cell_Death PF10539.9 NODE_62215_length_262_cov_1.431718_g54275_i0reverse_frame_3 - 0.018 14.9 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Development and cell death domain Ribosomal_S2 PF00318.20 NODE_62215_length_262_cov_1.431718_g54275_i0reverse_frame_3 - 0.1 11.8 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S2 PSI_integrin PF17205.3 NODE_62215_length_262_cov_1.431718_g54275_i0reverse_frame_2 - 0.68 9.7 6.6 1.2 8.9 5.0 2.1 1 1 1 2 2 2 0 Integrin plexin domain GUN4 PF05419.12 NODE_62212_length_262_cov_1.488987_g54272_i0reverse_frame_2 - 0.12 12.5 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 GUN4-like TSC22 PF01166.18 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.00012 22.3 0.6 0.00019 21.7 0.6 1.3 1 0 0 1 1 1 1 TSC-22/dip/bun family SHE3 PF17078.5 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.00087 19.1 1.3 0.00087 19.1 1.3 1.1 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Tup_N PF08581.10 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.0068 16.7 2.3 0.01 16.1 2.3 1.4 1 1 0 1 1 1 1 Tup N-terminal NRBF2 PF08961.10 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.0083 15.7 1.1 0.0094 15.6 1.1 1.3 1 0 0 1 1 1 1 Nuclear receptor-binding factor 2, autophagy regulator bZIP_1 PF00170.21 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.013 15.5 1.9 0.028 14.5 1.9 1.6 1 1 0 1 1 1 0 bZIP transcription factor ZnuA PF01297.17 NODE_62210_length_262_cov_1.502203_g54270_i0reverse_frame_3 - 0.2 11.0 3.6 0.24 10.8 3.6 1.1 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Fructosamin_kin PF03881.14 NODE_62207_length_262_cov_1.546256_g54267_i0forward_frame_3 - 5.3e-25 88.2 0.0 5.6e-25 88.1 0.0 1.0 1 0 0 1 1 1 1 Fructosamine kinase DUF5418 PF17439.2 NODE_62204_length_262_cov_1.577093_g54264_i0forward_frame_3 - 0.0014 18.7 6.5 0.0025 17.9 6.5 1.4 1 1 0 1 1 1 1 Family of unknown function (DUF5418) Pur_ac_phosph_N PF16656.5 NODE_62203_length_262_cov_1.577093_g54263_i0reverse_frame_3 - 0.077 13.6 0.1 0.088 13.4 0.1 1.2 1 0 0 1 1 1 0 Purple acid Phosphatase, N-terminal domain ArfGap PF01412.18 NODE_62201_length_262_cov_1.612335_g54261_i0forward_frame_3 - 5.1 7.2 10.2 5.7 7.1 10.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf DNA_pol_B_2 PF03175.13 NODE_62195_length_262_cov_1.757709_g54255_i0forward_frame_3 - 0.0087 15.0 0.0 0.0098 14.8 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral Transglut_core3 PF13471.6 NODE_62194_length_262_cov_1.775330_g54254_i0forward_frame_2 - 0.014 15.3 1.1 0.019 14.8 1.1 1.3 1 0 0 1 1 1 0 Transglutaminase-like superfamily Cons_hypoth698 PF03601.14 NODE_62192_length_262_cov_1.792952_g54252_i0reverse_frame_3 - 0.051 12.5 0.0 0.07 12.0 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical protein 698 GAT PF03127.14 NODE_62192_length_262_cov_1.792952_g54252_i0reverse_frame_2 - 0.053 13.8 0.1 0.07 13.4 0.1 1.3 1 0 0 1 1 1 0 GAT domain SFTA2 PF15210.6 NODE_62192_length_262_cov_1.792952_g54252_i0forward_frame_2 - 0.066 13.2 0.2 0.066 13.2 0.2 2.5 1 1 2 3 3 3 0 Surfactant-associated protein 2 FAD_binding_4 PF01565.23 NODE_62188_length_262_cov_1.898678_g54248_i0reverse_frame_2 - 2.9e-14 53.0 0.0 3.2e-14 52.8 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain mTERF PF02536.14 NODE_62187_length_262_cov_1.903084_g54247_i0reverse_frame_3 - 0.1 11.5 0.1 0.12 11.3 0.1 1.0 1 0 0 1 1 1 0 mTERF Pepdidase_M14_N PF18027.1 NODE_62185_length_262_cov_1.916300_g54245_i0reverse_frame_3 - 1.4e-13 51.2 0.2 1.5e-13 51.1 0.2 1.0 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain DUF4660 PF15559.6 NODE_62185_length_262_cov_1.916300_g54245_i0reverse_frame_3 - 0.1 12.9 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4660) Auto_anti-p27 PF06677.12 NODE_62183_length_262_cov_1.942731_g54243_i0reverse_frame_2 - 5.4e-14 52.1 4.5 7.8e-14 51.6 4.5 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) AbrB PF05145.12 NODE_62183_length_262_cov_1.942731_g54243_i0forward_frame_2 - 0.05 12.6 0.1 0.055 12.4 0.1 1.0 1 0 0 1 1 1 0 Transition state regulatory protein AbrB QSregVF_b PF12843.7 NODE_62182_length_262_cov_1.991189_g54242_i0forward_frame_2 - 0.025 14.4 0.0 0.036 13.9 0.0 1.3 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor Hep_core_N PF08290.11 NODE_62179_length_262_cov_2.022026_g54239_i0reverse_frame_2 - 0.09 12.8 0.2 0.09 12.8 0.2 1.9 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger MFS_1 PF07690.16 NODE_62177_length_262_cov_2.088106_g54237_i0forward_frame_2 - 4.8e-07 29.0 1.0 5.7e-07 28.8 1.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily NOD2_WH PF17779.1 NODE_62176_length_262_cov_2.101322_g54236_i0forward_frame_3 - 0.098 13.0 2.0 8.8 6.7 1.3 2.1 1 1 1 2 2 2 0 NOD2 winged helix domain PMC2NT PF08066.12 NODE_62175_length_262_cov_2.162996_g54235_i0forward_frame_2 - 0.019 15.6 0.0 0.028 15.1 0.0 1.3 1 0 0 1 1 1 0 PMC2NT (NUC016) domain Mpv17_PMP22 PF04117.12 NODE_62172_length_262_cov_2.220264_g54232_i0reverse_frame_3 - 0.01 16.1 0.4 0.015 15.5 0.4 1.2 1 0 0 1 1 1 0 Mpv17 / PMP22 family Epiglycanin_C PF14654.6 NODE_62171_length_262_cov_2.220264_g54231_i0reverse_frame_3 - 0.031 14.3 0.1 0.044 13.8 0.1 1.3 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region Ly49 PF08391.10 NODE_62171_length_262_cov_2.220264_g54231_i0reverse_frame_2 - 0.09 13.1 2.2 0.11 12.9 2.2 1.2 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region CAAX_1 PF15895.5 NODE_62167_length_262_cov_2.299559_g54227_i0reverse_frame_2 - 0.089 12.7 2.5 0.1 12.5 2.5 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 CX PF01705.19 NODE_62167_length_262_cov_2.299559_g54227_i0forward_frame_2 - 0.032 14.8 0.1 0.053 14.1 0.1 1.4 1 0 0 1 1 1 0 CX module UPF0370 PF13980.6 NODE_62165_length_262_cov_2.370044_g54225_i0reverse_frame_2 - 0.14 12.2 0.2 0.27 11.3 0.2 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0370) DUF1700 PF08006.11 NODE_62165_length_262_cov_2.370044_g54225_i0forward_frame_2 - 0.41 10.2 10.6 0.5 9.9 10.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Pkinase PF00069.25 NODE_62163_length_262_cov_2.458150_g54223_i0forward_frame_3 - 1.6e-19 70.3 1.4 1.7e-19 70.2 1.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_62163_length_262_cov_2.458150_g54223_i0forward_frame_3 - 1.2e-14 54.3 0.4 1.2e-14 54.2 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PsbQ PF05757.11 NODE_62163_length_262_cov_2.458150_g54223_i0forward_frame_3 - 0.08 12.7 0.0 0.097 12.4 0.0 1.2 1 0 0 1 1 1 0 Oxygen evolving enhancer protein 3 (PsbQ) FMO-like PF00743.19 NODE_62162_length_262_cov_2.488987_g54222_i0reverse_frame_2 - 0.00011 20.8 0.0 0.00011 20.8 0.0 1.1 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 NODE_62162_length_262_cov_2.488987_g54222_i0reverse_frame_2 - 0.051 12.8 0.0 0.051 12.8 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF1851 PF08906.11 NODE_62161_length_262_cov_2.533040_g54221_i0reverse_frame_2 - 0.18 11.8 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1851) ISAV_HA PF06215.11 NODE_62152_length_262_cov_2.784141_g54212_i0reverse_frame_3 - 0.02 14.0 0.2 0.023 13.9 0.2 1.0 1 0 0 1 1 1 0 Infectious salmon anaemia virus haemagglutinin Phage_integrase PF00589.22 NODE_62150_length_262_cov_2.867841_g54210_i0reverse_frame_2 - 0.05 13.4 0.0 0.051 13.4 0.0 1.1 1 0 0 1 1 1 0 Phage integrase family ChapFlgA_N PF17656.1 NODE_62149_length_262_cov_2.876652_g54209_i0reverse_frame_3 - 0.13 12.4 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 FlgA N-terminal domain NAD_binding_2 PF03446.15 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.00037 20.7 0.0 0.00043 20.5 0.0 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.00061 19.4 0.0 0.00079 19.0 0.0 1.1 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.011 15.7 0.1 0.013 15.4 0.1 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.023 14.0 0.0 0.024 14.0 0.0 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 NODE_62147_length_262_cov_2.977974_g54207_i0reverse_frame_2 - 0.091 12.1 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 ThiF family Acyl_CoA_thio PF02551.15 NODE_62146_length_262_cov_2.977974_g54206_i0reverse_frame_3 - 0.042 13.7 1.6 0.057 13.3 1.6 1.1 1 0 0 1 1 1 0 Acyl-CoA thioesterase DUF5408 PF17402.2 NODE_62146_length_262_cov_2.977974_g54206_i0reverse_frame_2 - 3.7 7.5 5.9 6 6.8 5.9 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5408) phage_tail_N PF08400.10 NODE_62146_length_262_cov_2.977974_g54206_i0forward_frame_2 - 0.096 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Prophage tail fibre N-terminal SecG PF03840.14 NODE_62145_length_262_cov_3.022026_g54205_i0reverse_frame_3 - 0.16 12.0 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Preprotein translocase SecG subunit ABC2_membrane_3 PF12698.7 NODE_62145_length_262_cov_3.022026_g54205_i0forward_frame_3 - 0.0087 15.2 0.0 0.01 14.9 0.0 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein 12TM_1 PF09847.9 NODE_62145_length_262_cov_3.022026_g54205_i0forward_frame_3 - 0.015 14.4 0.2 0.019 14.1 0.2 1.1 1 0 0 1 1 1 0 Membrane protein of 12 TMs ABC2_membrane_2 PF12679.7 NODE_62145_length_262_cov_3.022026_g54205_i0forward_frame_3 - 0.026 13.8 0.1 0.029 13.7 0.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Dmrt1 PF12374.8 NODE_62143_length_262_cov_3.066079_g54203_i0forward_frame_2 - 0.02 15.3 0.3 0.027 14.9 0.2 1.3 1 1 0 1 1 1 0 Double-sex mab3 related transcription factor 1 Mito_fiss_reg PF05308.11 NODE_62142_length_262_cov_3.123348_g54202_i0reverse_frame_2 - 0.023 14.8 1.2 0.023 14.8 1.2 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator DUF364 PF04016.12 NODE_62142_length_262_cov_3.123348_g54202_i0reverse_frame_2 - 0.16 11.5 0.3 0.21 11.2 0.3 1.1 1 0 0 1 1 1 0 Putative heavy-metal chelation PRIMA1 PF16101.5 NODE_62142_length_262_cov_3.123348_g54202_i0reverse_frame_2 - 0.67 10.0 5.9 0.85 9.7 5.9 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_62142_length_262_cov_3.123348_g54202_i0reverse_frame_2 - 8.6 5.7 9.5 12 5.3 9.5 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF5559 PF17714.1 NODE_62140_length_262_cov_3.718062_g54200_i0forward_frame_3 - 0.33 10.8 0.7 0.4 10.5 0.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5559) Aldo_ket_red PF00248.21 NODE_62139_length_262_cov_3.841410_g54199_i0reverse_frame_3 - 2.6e-15 56.4 0.0 2.6e-15 56.4 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DsrD PF08679.11 NODE_62139_length_262_cov_3.841410_g54199_i0reverse_frame_3 - 0.055 13.7 0.1 0.095 13.0 0.1 1.6 1 1 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) EPF PF17181.4 NODE_62137_length_262_cov_3.938326_g54197_i0reverse_frame_3 - 0.004 17.1 0.7 0.0052 16.7 0.1 1.5 2 0 0 2 2 2 1 Epidermal patterning factor proteins Xlink PF00193.17 NODE_62137_length_262_cov_3.938326_g54197_i0forward_frame_2 - 0.0089 16.4 0.7 0.01 16.2 0.7 1.1 1 0 0 1 1 1 1 Extracellular link domain DUF4318 PF14201.6 NODE_62136_length_262_cov_4.030837_g54196_i0forward_frame_3 - 0.2 12.2 1.5 0.4 11.2 0.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4318) Pyr_redox_dim PF02852.22 NODE_62135_length_262_cov_4.480176_g54195_i0reverse_frame_3 - 0.00017 21.8 0.1 0.00023 21.4 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IFT81_CH PF18383.1 NODE_62134_length_262_cov_6.392070_g54194_i0forward_frame_3 - 0.077 13.3 0.1 0.098 12.9 0.1 1.1 1 0 0 1 1 1 0 Intraflagellar transport 81 calponin homology domain MNSV_P7B PF06692.11 NODE_62134_length_262_cov_6.392070_g54194_i0forward_frame_2 - 1 9.4 0.1 1 9.4 0.1 2.5 2 1 1 3 3 3 0 Melon necrotic spot virus P7B protein Comm PF15957.5 NODE_62132_length_262_cov_16.863436_g54192_i0reverse_frame_3 - 0.13 12.6 1.6 0.15 12.4 1.6 1.1 1 0 0 1 1 1 0 Commissureless Cas9_Topo PF17894.1 NODE_62127_length_262_cov_35.462555_g54187_i0reverse_frame_3 - 0.14 12.2 1.4 1 9.5 0.0 2.1 2 0 0 2 2 2 0 Topo homolgy domain in CRISPR-associated endonuclease Cas9 DUF1609 PF07753.11 NODE_62127_length_262_cov_35.462555_g54187_i0reverse_frame_2 - 1.5 8.3 14.9 1.7 8.1 14.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1609) RNA_pol_A_CTD PF03118.15 NODE_62126_length_262_cov_40.255507_g54186_i0reverse_frame_2 - 0.02 14.7 0.2 0.028 14.2 0.2 1.3 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain VirE1 PF12189.8 NODE_62126_length_262_cov_40.255507_g54186_i0reverse_frame_2 - 0.058 13.5 0.1 0.075 13.1 0.1 1.2 1 0 0 1 1 1 0 Single-strand DNA-binding protein MurJ PF03023.14 NODE_62126_length_262_cov_40.255507_g54186_i0forward_frame_3 - 0.021 13.5 0.5 0.023 13.3 0.5 1.0 1 0 0 1 1 1 0 Lipid II flippase MurJ DUF3746 PF12562.8 NODE_62125_length_262_cov_42.220264_g54185_i0reverse_frame_2 - 0.1 12.5 0.8 0.18 11.7 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3746) DUF2058 PF09831.9 NODE_62123_length_262_cov_43.938326_g54183_i0reverse_frame_2 - 0.0011 19.1 0.2 0.0014 18.8 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2058) RhaT PF06379.12 NODE_62122_length_262_cov_44.414097_g54182_i0reverse_frame_2 - 0.029 13.6 0.2 0.031 13.5 0.2 1.0 1 0 0 1 1 1 0 L-rhamnose-proton symport protein (RhaT) Mrr_cat_2 PF13156.6 NODE_62119_length_262_cov_47.687225_g54179_i0reverse_frame_2 - 0.014 15.3 2.5 0.017 15.0 2.5 1.1 1 0 0 1 1 1 0 Restriction endonuclease DUF365 PF04033.12 NODE_62119_length_262_cov_47.687225_g54179_i0reverse_frame_2 - 0.018 15.3 1.2 0.023 15.0 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF365) LAS2 PF15792.5 NODE_62119_length_262_cov_47.687225_g54179_i0forward_frame_3 - 0.065 13.8 0.6 0.092 13.3 0.6 1.2 1 0 0 1 1 1 0 Lung adenoma susceptibility protein 2 Toxin_2 PF00451.19 NODE_62116_length_262_cov_52.229075_g54176_i0forward_frame_2 - 0.36 11.2 6.2 0.83 10.0 2.8 2.2 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 ARS2 PF04959.13 NODE_62114_length_262_cov_57.185022_g54174_i0reverse_frame_3 - 0.22 11.9 0.3 0.23 11.8 0.3 1.0 1 0 0 1 1 1 0 Arsenite-resistance protein 2 DUF2076 PF09849.9 NODE_62114_length_262_cov_57.185022_g54174_i0reverse_frame_3 - 0.56 10.2 5.7 0.55 10.2 5.7 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Crisp PF08562.10 NODE_62113_length_262_cov_59.339207_g54173_i0forward_frame_2 - 0.045 14.3 3.1 1.5 9.4 0.1 2.3 2 0 0 2 2 2 0 Crisp zf-BED PF02892.15 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.00082 19.3 0.9 0.0021 18.0 0.9 1.8 1 1 0 1 1 1 1 BED zinc finger zf-C2H2_4 PF13894.6 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.001 19.7 0.1 0.001 19.7 0.1 2.7 3 1 0 3 3 3 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.0013 18.9 0.0 0.01 16.1 0.0 2.3 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_2 PF12756.7 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.0093 16.3 0.6 0.0093 16.3 0.6 1.8 1 1 1 2 2 2 1 C2H2 type zinc-finger (2 copies) zf-met PF12874.7 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.011 16.1 0.0 0.031 14.7 0.0 1.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.023 15.1 0.4 0.023 15.1 0.4 2.3 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_12 PF18658.1 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 0.058 13.0 0.9 0.098 12.2 0.9 1.4 1 0 0 1 1 1 0 Zinc-finger C2H2-type zf-C2HE PF16278.5 NODE_62112_length_262_cov_59.925110_g54172_i0reverse_frame_2 - 1 9.8 5.5 2.8 8.5 0.5 2.2 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger HMG_box PF00505.19 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_3 - 9.1e-07 29.2 0.4 1.4e-06 28.6 0.4 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box Protamine_like PF06382.11 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_3 - 0.00031 20.9 0.1 0.00034 20.8 0.1 1.1 1 0 0 1 1 1 1 Protamine and protamine like DUF1644 PF07800.12 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_3 - 0.13 12.3 0.1 0.18 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) Calpain_inhib PF00748.19 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_3 - 0.16 12.5 5.4 0.18 12.3 5.4 1.1 1 0 0 1 1 1 0 Calpain inhibitor Defensin_1 PF00323.19 NODE_62111_length_262_cov_62.867841_g54171_i0reverse_frame_2 - 2 9.0 7.2 0.78 10.3 0.5 2.3 2 0 0 2 2 2 0 Mammalian defensin Malic_M PF03949.15 NODE_62109_length_262_cov_64.449339_g54169_i0forward_frame_2 - 0.025 13.9 0.1 0.028 13.7 0.1 1.0 1 0 0 1 1 1 0 Malic enzyme, NAD binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks307.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks307.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks307.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks307.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AreA_N PF07573.11 NODE_62107_length_262_cov_72.083700_g54167_i0forward_frame_3 - 0.036 14.7 0.1 0.055 14.1 0.1 1.2 1 0 0 1 1 1 0 Nitrogen regulatory protein AreA N terminus Mo25 PF08569.11 NODE_62105_length_262_cov_78.017621_g54165_i0reverse_frame_3 - 0.061 12.7 0.4 0.064 12.6 0.4 1.0 1 0 0 1 1 1 0 Mo25-like DUF5547 PF17701.1 NODE_62104_length_262_cov_78.599119_g54164_i0reverse_frame_3 - 0.13 12.1 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Rhodanese PF00581.20 NODE_62104_length_262_cov_78.599119_g54164_i0reverse_frame_2 - 0.011 16.3 0.0 0.013 16.0 0.0 1.1 1 0 0 1 1 1 0 Rhodanese-like domain DUF3715 PF12509.8 NODE_62102_length_262_cov_86.700441_g54162_i0forward_frame_3 - 0.044 13.8 0.1 0.051 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3715) eIF-3_zeta PF05091.12 NODE_62100_length_262_cov_93.511013_g54160_i0reverse_frame_2 - 2.9e-08 33.2 0.0 3.4e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) PgaPase_1 PF06162.12 NODE_62100_length_262_cov_93.511013_g54160_i0reverse_frame_2 - 0.026 14.3 0.0 0.032 14.0 0.0 1.1 1 0 0 1 1 1 0 Putative pyroglutamyl peptidase PgaPase_1 PAD PF03068.15 NODE_62100_length_262_cov_93.511013_g54160_i0reverse_frame_2 - 0.11 11.5 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) Ras PF00071.22 NODE_62098_length_262_cov_98.162996_g54158_i0forward_frame_2 - 3.6e-06 26.7 0.0 4.3e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_62098_length_262_cov_98.162996_g54158_i0forward_frame_2 - 0.064 13.5 0.0 0.086 13.1 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Endonuclease_7 PF02945.15 NODE_62096_length_262_cov_105.612335_g54156_i0forward_frame_2 - 0.0046 16.8 0.5 0.0058 16.5 0.5 1.1 1 0 0 1 1 1 1 Recombination endonuclease VII zf-RING_7 PF02591.15 NODE_62094_length_262_cov_108.810573_g54154_i0forward_frame_3 - 0.37 11.0 0.0 0.37 11.0 0.0 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain Ras PF00071.22 NODE_62090_length_262_cov_120.678414_g54150_i0reverse_frame_3 - 0.00025 20.7 0.0 0.00033 20.3 0.0 1.1 1 0 0 1 1 1 1 Ras family F_actin_bind PF08919.10 NODE_62087_length_262_cov_138.180617_g54147_i0forward_frame_2 - 0.12 12.5 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 F-actin binding DER1 PF04511.15 NODE_62085_length_262_cov_142.577093_g54145_i0forward_frame_2 - 0.0028 17.6 4.6 0.003 17.5 4.6 1.0 1 0 0 1 1 1 1 Der1-like family MNSV_P7B PF06692.11 NODE_62084_length_262_cov_143.621145_g54144_i0reverse_frame_2 - 1.8 8.6 6.3 0.31 11.1 2.3 1.8 2 0 0 2 2 2 0 Melon necrotic spot virus P7B protein zinc_ribbon_16 PF17034.5 NODE_62082_length_262_cov_152.083700_g54142_i0reverse_frame_3 - 1.4e-14 54.4 5.6 1.6e-14 54.2 5.6 1.1 1 0 0 1 1 1 1 Zinc-ribbon like family Zn_ribbon_17 PF17120.5 NODE_62082_length_262_cov_152.083700_g54142_i0reverse_frame_3 - 8.5e-07 28.5 10.2 1.1e-06 28.1 10.2 1.1 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type DHHC PF01529.20 NODE_62076_length_262_cov_288.713656_g54136_i0reverse_frame_3 - 0.091 12.9 1.9 0.12 12.5 1.9 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase Telomere_Sde2_2 PF13297.6 NODE_62072_length_262_cov_577.872247_g54132_i0reverse_frame_3 - 3.3e-05 23.5 0.0 4.8e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Telomere stability C-terminal eIF3_subunit PF08597.10 NODE_62067_length_262_cov_51393.823789_g54127_i0forward_frame_2 - 0.011 15.6 6.0 0.016 15.2 6.0 1.2 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit OAD_gamma PF04277.13 NODE_62067_length_262_cov_51393.823789_g54127_i0forward_frame_2 - 0.19 12.3 1.7 0.33 11.6 1.7 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain PTN_MK_N PF05196.13 NODE_62064_length_263_cov_1.039474_g54124_i0reverse_frame_3 - 0.064 13.5 0.1 0.096 12.9 0.1 1.3 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, N-terminal domain FdhE PF04216.12 NODE_62064_length_263_cov_1.039474_g54124_i0reverse_frame_2 - 0.13 12.2 4.2 0.14 12.0 4.2 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation Auxin_BP PF02041.16 NODE_62061_length_263_cov_1.074561_g54121_i0reverse_frame_2 - 0.11 12.2 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Auxin binding protein DUF1509 PF07420.11 NODE_62061_length_263_cov_1.074561_g54121_i0forward_frame_3 - 0.64 8.9 3.0 0.72 8.8 3.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) EF-hand_11 PF08976.11 NODE_62061_length_263_cov_1.074561_g54121_i0forward_frame_2 - 0.2 12.6 0.0 0.25 12.2 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain Codanin-1_C PF15296.6 NODE_62060_length_263_cov_1.109649_g54120_i0reverse_frame_2 - 0.042 13.9 0.2 0.056 13.5 0.2 1.1 1 0 0 1 1 1 0 Codanin-1 C-terminus DUF839 PF05787.13 NODE_62060_length_263_cov_1.109649_g54120_i0reverse_frame_2 - 0.17 11.0 0.3 0.17 11.0 0.3 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF839) DUF4125 PF13526.6 NODE_62058_length_263_cov_1.149123_g54118_i0forward_frame_3 - 0.14 11.7 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4125) Sigma_M_inh PF17453.2 NODE_62057_length_263_cov_1.166667_g54117_i0reverse_frame_2 - 0.033 14.6 0.2 0.042 14.3 0.2 1.1 1 0 0 1 1 1 0 Sigma-M inhibitor B9-C2 PF07162.11 NODE_62045_length_263_cov_1.307018_g54105_i0reverse_frame_3 - 7.5e-06 26.2 0.0 8.5e-06 26.1 0.0 1.0 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein MCPVI PF02993.14 NODE_62044_length_263_cov_1.324561_g54104_i0reverse_frame_3 - 0.91 9.3 5.3 1 9.1 5.3 1.0 1 0 0 1 1 1 0 Minor capsid protein VI CSN4_RPN5_eIF3a PF18420.1 NODE_62041_length_263_cov_1.364035_g54101_i0forward_frame_2 - 2.1 8.6 6.3 4.6 7.5 0.2 3.1 3 0 0 3 3 3 0 CSN4/RPN5/eIF3a helix turn helix domain Viral_Rep PF02407.16 NODE_62039_length_263_cov_1.385965_g54099_i0reverse_frame_2 - 0.024 14.9 0.0 0.032 14.5 0.0 1.2 1 0 0 1 1 1 0 Putative viral replication protein DUF5060 PF16586.5 NODE_62039_length_263_cov_1.385965_g54099_i0reverse_frame_2 - 0.055 13.8 0.1 0.072 13.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5060) Seadorna_VP7 PF07387.11 NODE_62032_length_263_cov_1.442982_g54092_i0forward_frame_3 - 0.049 12.7 0.1 0.054 12.5 0.1 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Shisa PF13908.6 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.00049 20.4 0.1 0.00052 20.3 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Cadherin_C_2 PF16492.5 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.0041 17.9 0.1 0.0048 17.6 0.1 1.2 1 0 0 1 1 1 1 Cadherin cytoplasmic C-terminal TMEM154 PF15102.6 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.066 13.1 0.1 0.077 12.9 0.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family LRR19-TM PF15176.6 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.066 13.2 1.1 0.086 12.8 0.9 1.3 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain FAM176 PF14851.6 NODE_62028_length_263_cov_1.486842_g54088_i0forward_frame_2 - 0.067 12.9 0.1 0.07 12.8 0.1 1.1 1 0 0 1 1 1 0 FAM176 family Adeno_terminal PF02459.15 NODE_62023_length_263_cov_1.596491_g54083_i0reverse_frame_3 - 0.14 10.5 0.3 0.15 10.4 0.3 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein Rubredoxin_2 PF18073.1 NODE_62015_length_263_cov_1.697368_g54075_i0forward_frame_2 - 0.064 13.0 4.2 0.064 13.0 4.2 2.5 2 2 0 2 2 2 0 Rubredoxin metal binding domain NRDE-2 PF08424.10 NODE_62013_length_263_cov_1.754386_g54073_i0reverse_frame_2 - 0.062 12.4 0.1 0.065 12.4 0.1 1.1 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference BBS2_C PF14782.6 NODE_62013_length_263_cov_1.754386_g54073_i0reverse_frame_2 - 0.15 10.8 2.2 0.17 10.7 2.2 1.0 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, C-terminal DUF4918 PF16265.5 NODE_62010_length_263_cov_1.780702_g54070_i0forward_frame_3 - 0.014 15.0 1.1 0.016 14.8 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) Zn-ribbon_8 PF09723.10 NODE_62007_length_263_cov_1.899123_g54067_i0reverse_frame_3 - 0.042 14.0 2.2 0.063 13.4 2.2 1.3 1 0 0 1 1 1 0 Zinc ribbon domain Cor1 PF04803.12 NODE_62003_length_263_cov_1.969298_g54063_i0reverse_frame_2 - 0.00021 21.5 3.9 0.00026 21.2 3.9 1.0 1 0 0 1 1 1 1 Cor1/Xlr/Xmr conserved region YkyA PF10368.9 NODE_62003_length_263_cov_1.969298_g54063_i0reverse_frame_2 - 0.0068 16.1 3.2 0.0078 15.9 3.2 1.0 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein LIN52 PF10044.9 NODE_62003_length_263_cov_1.969298_g54063_i0reverse_frame_2 - 0.15 12.8 3.2 0.35 11.6 3.0 1.7 1 1 0 1 1 1 0 Retinal tissue protein bZIP_1 PF00170.21 NODE_62003_length_263_cov_1.969298_g54063_i0reverse_frame_2 - 1.5 9.0 8.4 1.3 9.2 2.5 2.3 2 1 0 2 2 2 0 bZIP transcription factor DUF4834 PF16118.5 NODE_61998_length_263_cov_2.109649_g54058_i0reverse_frame_2 - 0.09 13.8 2.0 0.12 13.4 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF1980 PF09323.10 NODE_61998_length_263_cov_2.109649_g54058_i0reverse_frame_2 - 0.84 9.5 3.3 0.97 9.3 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF2207 PF09972.9 NODE_61998_length_263_cov_2.109649_g54058_i0forward_frame_2 - 0.92 8.2 9.1 1 8.0 9.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MgtE PF01769.16 NODE_61998_length_263_cov_2.109649_g54058_i0forward_frame_2 - 5.7 7.3 10.7 6.8 7.1 10.7 1.2 1 0 0 1 1 1 0 Divalent cation transporter Atracotoxin PF05353.11 NODE_61997_length_263_cov_2.114035_g54057_i0forward_frame_2 - 0.17 12.0 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 Delta Atracotoxin Adeno_E3_CR2 PF02439.15 NODE_61992_length_263_cov_2.223684_g54052_i0reverse_frame_3 - 0.93 9.3 3.3 0.76 9.6 0.8 2.0 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 Fer4_9 PF13187.6 NODE_61992_length_263_cov_2.223684_g54052_i0reverse_frame_3 - 2.2 8.5 10.1 9.9 6.4 10.1 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 NODE_61992_length_263_cov_2.223684_g54052_i0reverse_frame_3 - 2.8 8.5 8.3 7.5 7.2 2.4 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I DUF3847 PF12958.7 NODE_61990_length_263_cov_2.293860_g54050_i0reverse_frame_2 - 0.17 12.0 2.1 0.26 11.5 2.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3847) DZR PF12773.7 NODE_61987_length_263_cov_2.394737_g54047_i0reverse_frame_2 - 0.41 10.7 14.0 0.82 9.8 14.0 1.6 1 1 0 1 1 1 0 Double zinc ribbon CODH_A_N PF18537.1 NODE_61986_length_263_cov_2.543860_g54046_i0forward_frame_2 - 0.0066 16.4 0.0 0.0088 16.0 0.0 1.1 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Folate_rec PF03024.14 NODE_61984_length_263_cov_2.583333_g54044_i0forward_frame_3 - 1.3e-07 31.6 3.9 1.5e-07 31.4 3.9 1.0 1 0 0 1 1 1 1 Folate receptor family Radial_spoke PF04712.12 NODE_61982_length_263_cov_2.609649_g54042_i0forward_frame_3 - 0.00036 19.6 0.2 0.00038 19.6 0.2 1.0 1 0 0 1 1 1 1 Radial spokehead-like protein PhdYeFM_antitox PF02604.19 NODE_61981_length_263_cov_2.618421_g54041_i0reverse_frame_2 - 0.037 13.8 0.0 0.11 12.3 0.0 1.7 2 0 0 2 2 2 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Botulinum_HA-17 PF05588.11 NODE_61978_length_263_cov_2.850877_g54038_i0reverse_frame_2 - 0.016 15.3 0.1 0.017 15.2 0.1 1.2 1 0 0 1 1 1 0 Clostridium botulinum HA-17 domain aGPT-Pplase3 PF18746.1 NODE_61975_length_263_cov_2.942982_g54035_i0forward_frame_3 - 0.1 11.9 0.1 0.1 11.9 0.1 1.0 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 Corona_NS2 PF04753.12 NODE_61971_length_263_cov_3.219298_g54031_i0reverse_frame_3 - 0.055 14.1 0.1 0.069 13.7 0.1 1.3 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 FCSD-flav_bind PF09242.11 NODE_61968_length_263_cov_3.543860_g54028_i0reverse_frame_3 - 6.7 7.1 8.5 0.63 10.4 1.1 2.2 2 0 0 2 2 2 0 Flavocytochrome c sulphide dehydrogenase, flavin-binding Nop16 PF09420.10 NODE_61968_length_263_cov_3.543860_g54028_i0forward_frame_3 - 0.058 13.4 0.3 0.071 13.1 0.3 1.1 1 0 0 1 1 1 0 Ribosome biogenesis protein Nop16 DUF3719 PF12516.8 NODE_61966_length_263_cov_3.671053_g54026_i0forward_frame_2 - 0.15 11.8 0.0 5.7 6.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3719) Ribosomal_L27e PF01777.18 NODE_61960_length_263_cov_4.403509_g54020_i0reverse_frame_2 - 0.0094 16.3 0.2 0.011 16.0 0.2 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family STAG PF08514.11 NODE_61960_length_263_cov_4.403509_g54020_i0forward_frame_2 - 0.0014 18.5 1.4 0.0014 18.5 1.4 1.1 1 0 0 1 1 1 1 STAG domain Complex1_49kDa PF00346.19 NODE_61959_length_263_cov_4.881579_g54019_i0forward_frame_3 - 3.6e-09 36.1 0.0 4.8e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Arrestin_N PF00339.29 NODE_61954_length_263_cov_25.232456_g54014_i0reverse_frame_3 - 0.015 15.3 0.6 0.024 14.7 0.6 1.3 1 0 0 1 1 1 0 Arrestin (or S-antigen), N-terminal domain TLC PF03219.14 NODE_61954_length_263_cov_25.232456_g54014_i0reverse_frame_2 - 0.036 12.8 3.6 0.037 12.8 3.6 1.0 1 0 0 1 1 1 0 TLC ATP/ADP transporter DUF5595 PF18077.1 NODE_61954_length_263_cov_25.232456_g54014_i0reverse_frame_2 - 6.5 6.9 8.3 2.2 8.4 0.1 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF5595) DUF2207 PF09972.9 NODE_61954_length_263_cov_25.232456_g54014_i0forward_frame_3 - 9.5 4.9 11.4 10 4.8 11.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Col_cuticle_N PF01484.17 NODE_61952_length_263_cov_28.969298_g54012_i0forward_frame_2 - 1.2 9.2 7.2 4.1 7.5 2.2 2.2 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain Ion_trans PF00520.31 NODE_61951_length_263_cov_30.592105_g54011_i0forward_frame_2 - 0.015 14.5 1.5 0.016 14.5 1.5 1.1 1 0 0 1 1 1 0 Ion transport protein Herpes_UL73 PF03554.13 NODE_61950_length_263_cov_41.399123_g54010_i0reverse_frame_2 - 0.015 15.3 7.2 0.024 14.7 7.2 1.4 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein Pex24p PF06398.11 NODE_61950_length_263_cov_41.399123_g54010_i0reverse_frame_2 - 0.15 11.0 5.3 0.16 10.9 5.3 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Fer4 PF00037.27 NODE_61948_length_263_cov_47.894737_g54008_i0forward_frame_3 - 1.6 8.6 7.2 0.5 10.3 3.1 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain NADH_B2 PF14813.6 NODE_61947_length_263_cov_48.811404_g54007_i0reverse_frame_3 - 0.068 13.0 0.3 0.22 11.4 0.1 1.8 2 0 0 2 2 2 0 NADH dehydrogenase 1 beta subcomplex subunit 2 IMPDH PF00478.25 NODE_61947_length_263_cov_48.811404_g54007_i0reverse_frame_3 - 0.2 10.6 0.0 0.2 10.6 0.0 1.1 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Sclerostin PF05463.11 NODE_61945_length_263_cov_49.425439_g54005_i0forward_frame_3 - 0.017 14.8 0.0 0.022 14.5 0.0 1.1 1 0 0 1 1 1 0 Sclerostin (SOST) Wzy_C PF04932.15 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.012 15.3 0.1 0.013 15.1 0.1 1.1 1 0 0 1 1 1 0 O-Antigen ligase DUF4834 PF16118.5 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.02 15.9 0.3 0.024 15.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) RXLR PF16810.5 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.024 15.1 0.1 0.027 14.9 0.1 1.1 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity DUF1517 PF07466.11 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.027 14.6 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1517) Peptidase_S49_N PF08496.10 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_3 - 0.044 13.9 1.2 0.055 13.5 1.2 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal OS-D PF03392.13 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_2 - 0.02 15.0 8.2 0.024 14.7 8.2 1.1 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D RNA_pol_Rpb2_7 PF04560.20 NODE_61941_length_263_cov_54.824561_g54001_i0forward_frame_2 - 0.57 10.6 2.5 3.7 8.0 2.5 1.9 1 1 0 1 1 1 0 RNA polymerase Rpb2, domain 7 DUF5096 PF17019.5 NODE_61940_length_263_cov_59.140351_g54000_i0forward_frame_2 - 0.018 14.8 0.1 0.02 14.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5096) FlaG PF03646.15 NODE_61939_length_263_cov_59.491228_g53999_i0reverse_frame_3 - 0.022 14.9 2.3 0.026 14.7 2.3 1.1 1 0 0 1 1 1 0 FlaG protein PHD PF00628.29 NODE_61938_length_263_cov_60.578947_g53998_i0reverse_frame_2 - 0.078 12.9 1.8 0.43 10.5 0.0 2.1 2 0 0 2 2 2 0 PHD-finger zf-HC5HC2H PF13771.6 NODE_61938_length_263_cov_60.578947_g53998_i0reverse_frame_2 - 0.16 12.2 4.7 1.1 9.6 0.9 2.1 2 0 0 2 2 2 0 PHD-like zinc-binding domain Ndc1_Nup PF09531.10 NODE_61935_length_263_cov_64.017544_g53995_i0reverse_frame_3 - 1.2 7.7 9.0 1.5 7.4 9.0 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup YrvL PF14184.6 NODE_61935_length_263_cov_64.017544_g53995_i0reverse_frame_2 - 0.0092 16.1 5.9 0.012 15.7 5.9 1.1 1 0 0 1 1 1 1 Regulatory protein YrvL Daxx PF03344.15 NODE_61935_length_263_cov_64.017544_g53995_i0forward_frame_3 - 0.012 15.7 0.3 0.021 14.9 0.3 1.6 1 1 0 1 1 1 0 Daxx N-terminal Rassf1C-interacting domain RNase_J_C PF17770.1 NODE_61935_length_263_cov_64.017544_g53995_i0forward_frame_2 - 0.076 14.1 0.9 0.12 13.4 0.9 1.4 1 0 0 1 1 1 0 Ribonuclease J C-terminal domain DUF166 PF02593.14 NODE_61934_length_263_cov_64.346491_g53994_i0forward_frame_3 - 0.065 12.8 0.0 0.074 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF4604 PF15377.6 NODE_61932_length_263_cov_67.942982_g53992_i0reverse_frame_3 - 1.4 9.4 10.7 1.7 9.0 10.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) Methyltrans_RNA PF04452.14 NODE_61931_length_263_cov_70.140351_g53991_i0forward_frame_3 - 0.094 12.0 0.0 0.094 12.0 0.0 1.1 1 0 0 1 1 1 0 RNA methyltransferase VPDSG-CTERM PF18205.1 NODE_61929_length_263_cov_74.482456_g53989_i0forward_frame_3 - 2.4 8.1 0.1 2.4 8.1 0.1 2.8 3 0 0 3 3 3 0 VPDSG-CTERM motif DUF4849 PF16141.5 NODE_61927_length_263_cov_76.736842_g53987_i0forward_frame_2 - 0.02 14.2 0.4 0.024 13.9 0.4 1.1 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 DNA_pol_lambd_f PF10391.9 NODE_61927_length_263_cov_76.736842_g53987_i0forward_frame_2 - 0.079 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda CbiG_mid PF11761.8 NODE_61927_length_263_cov_76.736842_g53987_i0forward_frame_2 - 0.089 12.9 0.0 0.25 11.5 0.0 1.7 1 1 0 1 1 1 0 Cobalamin biosynthesis central region HCV_NS2 PF01538.18 NODE_61926_length_263_cov_80.464912_g53986_i0forward_frame_2 - 0.045 13.4 0.0 0.05 13.3 0.0 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 zf-4CXXC_R1 PF10497.9 NODE_61923_length_263_cov_100.057018_g53983_i0forward_frame_2 - 0.017 15.4 0.1 0.02 15.1 0.1 1.2 1 0 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 Secapin PF17521.2 NODE_61922_length_263_cov_101.232456_g53982_i0reverse_frame_3 - 5.1 7.0 7.7 0.62 9.9 0.6 2.7 3 0 0 3 3 3 0 Honey bee peptides Ank_2 PF12796.7 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 1e-07 32.5 0.0 1.2e-07 32.2 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 0.0001 22.5 0.0 0.3 11.4 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 0.00049 20.4 0.1 1.1 9.9 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 0.0054 17.3 0.0 0.0071 16.9 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_61922_length_263_cov_101.232456_g53982_i0forward_frame_3 - 0.0055 17.1 0.0 2.8 8.8 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat PsbH PF00737.20 NODE_61915_length_263_cov_164.320175_g53975_i0forward_frame_2 - 3.6 7.4 5.9 1.3 8.8 0.6 2.2 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein Ank_2 PF12796.7 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 1e-12 48.4 0.0 1.2e-12 48.3 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 4.1e-11 43.2 0.0 5.1e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 2.9e-08 33.3 0.0 0.0002 21.5 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 4.5e-08 33.2 0.0 0.0012 19.2 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 5.5e-08 32.9 0.0 0.00018 21.7 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) DUF1830 PF08865.11 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 0.099 12.7 0.0 0.21 11.6 0.0 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF1830) YlzJ PF14035.6 NODE_61914_length_263_cov_164.596491_g53974_i0reverse_frame_2 - 0.22 11.7 0.0 9.6 6.5 0.0 2.1 1 1 1 2 2 2 0 YlzJ-like protein HHH_6 PF14579.6 NODE_61912_length_263_cov_175.333333_g53972_i0reverse_frame_2 - 0.092 13.0 0.2 13 6.2 0.0 2.1 1 1 1 2 2 2 0 Helix-hairpin-helix motif zf-ANAPC11 PF12861.7 NODE_61911_length_263_cov_221.820175_g53971_i0forward_frame_3 - 0.005 16.9 1.4 0.0062 16.6 1.4 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Neurokinin_B PF03823.14 NODE_61911_length_263_cov_221.820175_g53971_i0forward_frame_3 - 0.037 14.1 0.7 0.062 13.3 0.1 1.6 1 1 1 2 2 2 0 Neurokinin B DNA_pol_phi PF04931.13 NODE_61907_length_263_cov_582.447368_g53967_i0reverse_frame_3 - 5.8 4.9 12.6 6.1 4.8 12.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi SR-25 PF10500.9 NODE_61905_length_263_cov_868.978070_g53965_i0reverse_frame_3 - 0.018 14.7 8.7 0.019 14.6 8.7 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3772 PF12607.8 NODE_61904_length_263_cov_1151.280702_g53964_i0forward_frame_3 - 1.3 8.9 3.3 1.9 8.3 3.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) Phage_tail_L PF05100.12 NODE_61903_length_263_cov_2621.175439_g53963_i0forward_frame_3 - 0.2 10.9 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Phage minor tail protein L DUF4962 PF16332.5 NODE_61901_length_264_cov_0.930131_g53961_i0forward_frame_3 - 0.053 12.0 0.1 0.06 11.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4962) DUF5582 PF17819.1 NODE_61896_length_264_cov_1.043668_g53956_i0forward_frame_3 - 2.6e-05 24.7 0.0 3e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5582) DUF5008 PF16400.5 NODE_61895_length_264_cov_1.048035_g53955_i0reverse_frame_3 - 0.063 13.4 0.0 0.081 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5008) ETRAMP PF09716.10 NODE_61887_length_264_cov_1.218341_g53947_i0reverse_frame_3 - 0.15 12.1 2.1 0.18 11.9 2.1 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF3341 PF11821.8 NODE_61887_length_264_cov_1.218341_g53947_i0forward_frame_3 - 0.033 13.8 1.0 0.043 13.5 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) Tmemb_9 PF05434.11 NODE_61887_length_264_cov_1.218341_g53947_i0forward_frame_3 - 0.54 10.1 2.3 0.73 9.7 2.3 1.2 1 0 0 1 1 1 0 TMEM9 VPS11_C PF12451.8 NODE_61886_length_264_cov_1.222707_g53946_i0reverse_frame_3 - 0.27 11.5 2.2 0.33 11.2 0.2 2.1 2 1 0 2 2 2 0 Vacuolar protein sorting protein 11 C terminal DUF4965 PF16335.5 NODE_61883_length_264_cov_1.240175_g53943_i0forward_frame_2 - 0.0074 16.0 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4965) P22_AR_C PF10548.9 NODE_61882_length_264_cov_1.244541_g53942_i0reverse_frame_2 - 0.055 13.6 0.1 0.63 10.2 0.0 2.0 2 0 0 2 2 2 0 P22AR C-terminal domain Dynein_heavy PF03028.15 NODE_61882_length_264_cov_1.244541_g53942_i0reverse_frame_2 - 0.12 12.5 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Dynein heavy chain region D6 P-loop domain Cytochrome_B PF00033.19 NODE_61877_length_264_cov_1.314410_g53937_i0reverse_frame_2 - 0.03 14.1 0.4 0.033 14.0 0.4 1.1 1 0 0 1 1 1 0 Cytochrome b/b6/petB Toxin_35 PF10530.9 NODE_61876_length_264_cov_1.340611_g53936_i0forward_frame_3 - 0.013 15.5 2.3 0.013 15.5 2.3 1.9 1 1 0 1 1 1 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold zf_CCCH_4 PF18345.1 NODE_61875_length_264_cov_1.366812_g53935_i0reverse_frame_3 - 2.8e-07 30.4 0.8 2.8e-07 30.4 0.8 1.7 2 0 0 2 2 2 1 Zinc finger domain zf-CCCH_3 PF15663.5 NODE_61875_length_264_cov_1.366812_g53935_i0reverse_frame_3 - 2.4e-06 27.7 5.4 3.7e-06 27.1 5.4 1.3 1 0 0 1 1 1 1 Zinc-finger containing family zf-CCCH_4 PF18044.1 NODE_61875_length_264_cov_1.366812_g53935_i0reverse_frame_3 - 8.1e-05 22.3 0.2 0.00016 21.4 0.2 1.5 1 0 0 1 1 1 1 CCCH-type zinc finger Torus PF16131.5 NODE_61875_length_264_cov_1.366812_g53935_i0reverse_frame_3 - 0.00011 22.9 2.9 0.00012 22.7 2.9 1.2 1 0 0 1 1 1 1 Torus domain zf-CCCH PF00642.24 NODE_61875_length_264_cov_1.366812_g53935_i0reverse_frame_3 - 0.0039 17.1 2.9 0.097 12.6 0.1 2.3 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 NODE_61875_length_264_cov_1.366812_g53935_i0reverse_frame_3 - 0.051 14.1 0.7 0.051 14.1 0.7 2.4 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Gyro_capsid PF04162.12 NODE_61874_length_264_cov_1.371179_g53934_i0forward_frame_2 - 0.3 9.5 2.8 0.37 9.2 2.8 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) DUF4077 PF13295.6 NODE_61873_length_264_cov_1.375546_g53933_i0reverse_frame_3 - 0.051 13.5 0.2 0.059 13.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4077) NCD3G PF07562.14 NODE_61872_length_264_cov_1.393013_g53932_i0reverse_frame_2 - 1 9.4 13.6 2.7 8.0 13.6 1.9 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR Cation_ATPase PF13246.6 NODE_61870_length_264_cov_1.401747_g53930_i0forward_frame_2 - 2e-17 63.0 0.0 2.4e-17 62.8 0.0 1.1 1 0 0 1 1 1 1 Cation transport ATPase (P-type) PTP_tm PF18861.1 NODE_61866_length_264_cov_1.502183_g53926_i0reverse_frame_2 - 0.0023 17.9 0.1 0.0025 17.8 0.1 1.0 1 0 0 1 1 1 1 Transmembrane domain of protein tyrosine phosphatase, receptor type J CBM_14 PF01607.24 NODE_61862_length_264_cov_1.572052_g53922_i0reverse_frame_3 - 0.0065 16.6 6.2 2.9 8.1 0.1 3.1 2 1 0 2 2 2 2 Chitin binding Peritrophin-A domain Lustrin_cystein PF14625.6 NODE_61862_length_264_cov_1.572052_g53922_i0reverse_frame_3 - 0.034 14.5 21.2 4.7 7.7 3.5 4.5 1 1 2 3 3 3 0 Lustrin, cysteine-rich repeated domain Dickkopf_N PF04706.12 NODE_61862_length_264_cov_1.572052_g53922_i0reverse_frame_3 - 0.073 13.6 8.2 9.6 6.8 0.6 3.6 2 1 1 3 3 3 0 Dickkopf N-terminal cysteine-rich region RteC PF09357.10 NODE_61861_length_264_cov_1.576419_g53921_i0reverse_frame_3 - 0.0011 18.7 0.2 0.0013 18.5 0.2 1.1 1 0 0 1 1 1 1 RteC protein PAS_8 PF13188.7 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 3.1e-08 33.4 0.0 3.7e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 7.1e-07 29.2 0.0 9.4e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 0.00012 22.3 0.0 0.00014 22.1 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 0.00022 21.4 0.0 0.00025 21.3 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_7 PF12860.7 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 0.004 17.3 0.0 0.0049 17.0 0.0 1.3 1 1 0 1 1 1 1 PAS fold MLTR_LBD PF17765.1 NODE_61858_length_264_cov_1.611354_g53918_i0forward_frame_3 - 0.029 14.5 0.0 0.03 14.5 0.0 1.2 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain Atracotoxin PF05353.11 NODE_61857_length_264_cov_1.620087_g53917_i0forward_frame_2 - 0.032 14.3 0.2 0.048 13.7 0.2 1.3 1 0 0 1 1 1 0 Delta Atracotoxin MKT1_C PF12246.8 NODE_61850_length_264_cov_1.707424_g53910_i0forward_frame_2 - 0.019 14.2 0.0 0.021 14.1 0.0 1.1 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication Lipoprotein_Ltp PF07553.11 NODE_61848_length_264_cov_1.737991_g53908_i0reverse_frame_2 - 0.12 12.7 1.2 0.21 11.9 1.2 1.3 1 0 0 1 1 1 0 Host cell surface-exposed lipoprotein DUF2982 PF11201.8 NODE_61847_length_264_cov_1.746725_g53907_i0forward_frame_2 - 0.1 12.2 1.6 0.12 11.9 1.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2982) LRR_4 PF12799.7 NODE_61841_length_264_cov_1.807860_g53901_i0forward_frame_3 - 0.063 13.7 0.1 0.31 11.5 0.1 2.1 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 NODE_61841_length_264_cov_1.807860_g53901_i0forward_frame_2 - 2.1e-05 24.1 0.6 2.5e-05 23.8 0.6 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 NODE_61841_length_264_cov_1.807860_g53901_i0forward_frame_2 - 2.4e-05 24.6 3.0 3.4e-05 24.1 3.0 1.2 1 0 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_61841_length_264_cov_1.807860_g53901_i0forward_frame_2 - 4.7e-05 23.1 1.5 6e-05 22.7 1.5 1.1 1 0 0 1 1 1 1 Leucine rich repeat SsgA PF04686.12 NODE_61840_length_264_cov_1.816594_g53900_i0forward_frame_3 - 0.13 12.2 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA DUF842 PF05811.13 NODE_61837_length_264_cov_1.838428_g53897_i0reverse_frame_2 - 0.033 13.9 0.1 0.038 13.7 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) SH3-RhoG_link PF16609.5 NODE_61837_length_264_cov_1.838428_g53897_i0forward_frame_2 - 0.00076 19.3 0.9 0.0009 19.1 0.9 1.1 1 0 0 1 1 1 1 SH3-RhoGEF linking unstructured region DUF3122 PF11320.8 NODE_61833_length_264_cov_1.912664_g53893_i0forward_frame_3 - 0.063 13.4 0.0 0.075 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3122) SUIM_assoc PF16619.5 NODE_61831_length_264_cov_1.965066_g53891_i0reverse_frame_3 - 0.16 12.1 3.3 2.6 8.2 1.1 2.1 2 0 0 2 2 2 0 Unstructured region C-term to UIM in Ataxin3 PolyG_pol PF01518.16 NODE_61831_length_264_cov_1.965066_g53891_i0reverse_frame_2 - 0.094 11.4 0.2 0.11 11.2 0.2 1.1 1 0 0 1 1 1 0 Sigma NS protein dsRBD2 PF17842.1 NODE_61828_length_264_cov_2.008734_g53888_i0reverse_frame_2 - 0.026 14.7 0.1 0.034 14.4 0.1 1.1 1 0 0 1 1 1 0 Double-stranded RNA binding domain 2 DUF5314 PF17241.2 NODE_61825_length_264_cov_2.052402_g53885_i0reverse_frame_3 - 0.0065 16.2 3.5 0.0085 15.8 3.5 1.3 1 1 0 1 1 1 1 Family of unknown function (DUF5314) TAL_FSA PF00923.19 NODE_61825_length_264_cov_2.052402_g53885_i0reverse_frame_2 - 1.7e-07 30.9 0.0 1.7e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase EF_assoc_2 PF08356.12 NODE_61824_length_264_cov_2.061135_g53884_i0reverse_frame_3 - 0.026 14.5 0.0 0.04 13.9 0.0 1.3 1 1 0 1 1 1 0 EF hand associated Paired_CXXCH_1 PF09699.10 NODE_61822_length_264_cov_2.104803_g53882_i0forward_frame_3 - 0.006 16.3 0.1 0.0091 15.7 0.1 1.3 1 0 0 1 1 1 1 Doubled CXXCH motif (Paired_CXXCH_1) PqiA PF04403.13 NODE_61822_length_264_cov_2.104803_g53882_i0forward_frame_3 - 0.028 14.2 0.0 0.031 14.1 0.0 1.0 1 0 0 1 1 1 0 Paraquat-inducible protein A AlaDh_PNT_C PF01262.21 NODE_61820_length_264_cov_2.174672_g53880_i0forward_frame_2 - 2.7e-08 33.4 0.0 3.2e-08 33.1 0.0 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain KSHV_K8 PF07188.11 NODE_61820_length_264_cov_2.174672_g53880_i0forward_frame_2 - 0.041 13.3 0.0 0.041 13.3 0.0 1.1 1 0 0 1 1 1 0 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein ANAPC4_WD40 PF12894.7 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_3 - 1.8e-06 28.2 0.0 4e-06 27.0 0.0 1.5 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_3 - 0.0011 19.8 0.0 0.046 14.6 0.0 2.2 2 0 0 2 2 2 1 WD domain, G-beta repeat DUF1964 PF09244.10 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_3 - 0.14 12.6 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1964) Nucleoporin_N PF08801.11 NODE_61812_length_264_cov_2.301310_g53872_i0reverse_frame_3 - 0.15 10.8 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 Nup133 N terminal like DRTGG PF07085.12 NODE_61811_length_264_cov_2.336245_g53871_i0reverse_frame_3 - 0.029 14.1 0.0 0.031 14.1 0.0 1.2 1 0 0 1 1 1 0 DRTGG domain SSP160 PF06933.11 NODE_61810_length_264_cov_2.393013_g53870_i0reverse_frame_3 - 0.019 13.2 3.2 0.02 13.1 3.2 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Sporozoite_P67 PF05642.11 NODE_61810_length_264_cov_2.393013_g53870_i0forward_frame_2 - 0.067 11.3 5.7 0.081 11.0 5.7 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen SSP160 PF06933.11 NODE_61810_length_264_cov_2.393013_g53870_i0forward_frame_2 - 0.28 9.3 18.9 0.28 9.3 18.9 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Mucin PF01456.17 NODE_61810_length_264_cov_2.393013_g53870_i0forward_frame_2 - 1.9 8.5 23.9 3.1 7.8 23.9 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF3439 PF11921.8 NODE_61810_length_264_cov_2.393013_g53870_i0forward_frame_2 - 6.2 6.8 22.1 11 6.0 22.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) DUF1072 PF06380.11 NODE_61809_length_264_cov_2.436681_g53869_i0reverse_frame_3 - 0.065 13.1 0.9 0.065 13.1 0.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) Peptidase_C54 PF03416.19 NODE_61809_length_264_cov_2.436681_g53869_i0forward_frame_2 - 0.12 11.8 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase family C54 Siva PF05458.12 NODE_61806_length_264_cov_2.445415_g53866_i0reverse_frame_2 - 0.015 15.0 2.3 0.017 14.8 2.3 1.0 1 0 0 1 1 1 0 Cd27 binding protein (Siva) DUF4802 PF16060.5 NODE_61806_length_264_cov_2.445415_g53866_i0forward_frame_3 - 0.013 15.7 0.3 0.017 15.2 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4802) Cobl PF09469.10 NODE_61805_length_264_cov_2.458515_g53865_i0reverse_frame_3 - 0.039 14.2 0.0 0.04 14.2 0.0 1.1 1 0 0 1 1 1 0 Cordon-bleu ubiquitin-like domain HTH_38 PF13936.6 NODE_61803_length_264_cov_2.475983_g53863_i0reverse_frame_3 - 0.0063 16.2 0.1 0.0094 15.7 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain DUF5309 PF17236.2 NODE_61802_length_264_cov_2.484716_g53862_i0forward_frame_3 - 0.039 13.3 0.1 0.039 13.3 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5309) PRD PF00874.20 NODE_61800_length_264_cov_2.541485_g53860_i0forward_frame_2 - 7.8e-09 35.7 0.0 8.9e-09 35.5 0.0 1.0 1 0 0 1 1 1 1 PRD domain COPI_C PF06957.11 NODE_61799_length_264_cov_2.541485_g53859_i0reverse_frame_3 - 3.5e-15 55.7 0.6 3.9e-15 55.5 0.6 1.0 1 0 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus zf-CW PF07496.15 NODE_61794_length_264_cov_2.655022_g53854_i0forward_frame_3 - 0.073 13.1 0.2 0.14 12.2 0.2 1.5 1 0 0 1 1 1 0 CW-type Zinc Finger zf-RING_13 PF17977.1 NODE_61794_length_264_cov_2.655022_g53854_i0forward_frame_2 - 0.033 14.3 0.3 0.033 14.3 0.3 1.5 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-AD PF07776.15 NODE_61793_length_264_cov_2.733624_g53853_i0forward_frame_3 - 0.085 13.1 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) DUF3045 PF11243.8 NODE_61793_length_264_cov_2.733624_g53853_i0forward_frame_3 - 0.1 12.7 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3045) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks308.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks308.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks308.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks308.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3302 PF11742.8 NODE_61789_length_264_cov_3.000000_g53849_i0reverse_frame_3 - 0.045 13.9 0.3 0.055 13.6 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3302) Claudin_2 PF13903.6 NODE_61788_length_264_cov_3.170306_g53848_i0reverse_frame_3 - 0.18 11.6 0.2 0.18 11.6 0.2 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction Pkinase PF00069.25 NODE_61787_length_264_cov_3.497817_g53847_i0reverse_frame_2 - 0.00043 19.7 0.0 0.00051 19.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF1962 PF09227.10 NODE_61786_length_264_cov_3.510917_g53846_i0reverse_frame_3 - 1.2 9.5 4.2 37 4.8 0.1 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF1962) Biliv-reduc_cat PF09166.10 NODE_61786_length_264_cov_3.510917_g53846_i0forward_frame_3 - 0.0035 17.6 2.1 0.18 12.1 0.2 2.3 1 1 1 2 2 2 2 Biliverdin reductase, catalytic Tachystatin_B PF11478.8 NODE_61786_length_264_cov_3.510917_g53846_i0forward_frame_3 - 0.059 13.3 0.6 1.7 8.6 0.1 2.3 2 0 0 2 2 2 0 Antimicrobial chitin binding protein tachystatin B DUF979 PF06166.12 NODE_61786_length_264_cov_3.510917_g53846_i0forward_frame_3 - 0.086 12.0 1.3 0.13 11.4 1.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF979) GTP1_OBG PF01018.22 NODE_61784_length_264_cov_5.475983_g53844_i0reverse_frame_2 - 0.023 14.3 0.2 0.023 14.3 0.2 1.5 1 1 0 1 1 1 0 GTP1/OBG RAMP4 PF06624.12 NODE_61778_length_264_cov_29.248908_g53838_i0reverse_frame_3 - 0.22 11.6 0.1 0.22 11.6 0.1 2.2 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 DUF5439 PF17507.2 NODE_61778_length_264_cov_29.248908_g53838_i0reverse_frame_3 - 4.3 7.6 5.8 26 5.1 2.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5439) DUF5501 PF17605.2 NODE_61777_length_264_cov_29.908297_g53837_i0forward_frame_2 - 0.04 14.3 0.1 0.049 14.1 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5501) YidD PF01809.18 NODE_61775_length_264_cov_39.502183_g53835_i0reverse_frame_3 - 0.12 12.3 4.7 0.37 10.7 0.7 2.8 1 1 1 2 2 2 0 Putative membrane protein insertion efficiency factor YtzH PF14165.6 NODE_61775_length_264_cov_39.502183_g53835_i0reverse_frame_2 - 0.012 16.0 0.6 0.016 15.6 0.1 1.5 2 0 0 2 2 2 0 YtzH-like protein Baculo_11_kDa PF06143.11 NODE_61771_length_264_cov_47.554585_g53831_i0forward_frame_3 - 3 7.5 6.0 4.1 7.1 6.0 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family MMM1 PF10296.9 NODE_61770_length_264_cov_47.628821_g53830_i0reverse_frame_3 - 0.25 10.3 4.1 0.31 10.1 4.1 1.0 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 zf_C2H2_6 PF18450.1 NODE_61769_length_264_cov_49.886463_g53829_i0forward_frame_2 - 0.052 13.3 2.0 0.13 12.0 2.0 1.7 1 0 0 1 1 1 0 Zinc Finger domain LIM_bind PF01803.16 NODE_61767_length_264_cov_55.388646_g53827_i0forward_frame_2 - 0.035 13.6 0.2 0.042 13.4 0.2 1.0 1 0 0 1 1 1 0 LIM-domain binding protein Ribosomal_L14 PF00238.19 NODE_61760_length_264_cov_60.227074_g53820_i0reverse_frame_2 - 0.055 13.5 0.0 0.056 13.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L14p/L23e DUF5083 PF16890.5 NODE_61760_length_264_cov_60.227074_g53820_i0forward_frame_2 - 0.14 11.9 3.5 0.23 11.2 3.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF5083) CENP-T_N PF16171.5 NODE_61759_length_264_cov_62.698690_g53819_i0forward_frame_2 - 0.027 13.4 2.8 0.028 13.4 2.8 1.0 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T N-terminus AurF PF11583.8 NODE_61758_length_264_cov_62.895197_g53818_i0forward_frame_2 - 0.051 12.8 0.1 0.06 12.6 0.1 1.1 1 0 0 1 1 1 0 P-aminobenzoate N-oxygenase AurF SR-25 PF10500.9 NODE_61755_length_264_cov_72.585153_g53815_i0forward_frame_3 - 0.0089 15.7 5.9 0.01 15.5 5.9 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein SurA_N PF09312.11 NODE_61754_length_264_cov_78.126638_g53814_i0forward_frame_3 - 0.02 15.0 0.2 0.044 13.8 0.2 1.5 1 1 1 2 2 2 0 SurA N-terminal domain Lipase_GDSL_2 PF13472.6 NODE_61754_length_264_cov_78.126638_g53814_i0forward_frame_3 - 0.02 15.3 0.0 0.022 15.2 0.0 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 NODE_61754_length_264_cov_78.126638_g53814_i0forward_frame_3 - 0.062 13.3 0.0 0.062 13.3 0.0 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase Activator_LAG-3 PF11498.8 NODE_61753_length_264_cov_80.174672_g53813_i0reverse_frame_2 - 0.29 10.1 2.1 0.28 10.1 2.1 1.0 1 0 0 1 1 1 0 Transcriptional activator LAG-3 Comm PF15957.5 NODE_61746_length_264_cov_110.165939_g53806_i0reverse_frame_2 - 0.035 14.5 0.8 0.035 14.5 0.8 1.5 2 0 0 2 2 2 0 Commissureless E3_UFM1_ligase PF09743.9 NODE_61746_length_264_cov_110.165939_g53806_i0forward_frame_2 - 0.018 14.7 0.0 0.021 14.4 0.0 1.1 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 DUF4663 PF15668.5 NODE_61745_length_264_cov_117.781659_g53805_i0forward_frame_2 - 0.016 14.3 0.0 0.018 14.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4663) Ion_trans PF00520.31 NODE_61744_length_264_cov_126.471616_g53804_i0reverse_frame_2 - 2.2e-09 36.9 0.1 2.2e-09 36.9 0.1 1.0 1 0 0 1 1 1 1 Ion transport protein UIM PF02809.20 NODE_61740_length_264_cov_168.362445_g53800_i0reverse_frame_2 - 3.6e-05 23.4 1.6 3.6e-05 23.4 1.6 1.9 2 0 0 2 2 2 1 Ubiquitin interaction motif RE_SinI PF09570.10 NODE_61739_length_264_cov_182.419214_g53799_i0reverse_frame_2 - 0.0098 15.2 0.1 0.011 14.9 0.1 1.1 1 0 0 1 1 1 1 SinI restriction endonuclease UBM PF14377.6 NODE_61739_length_264_cov_182.419214_g53799_i0reverse_frame_2 - 0.055 12.9 0.1 0.082 12.4 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin binding region DUF2733 PF10813.8 NODE_61739_length_264_cov_182.419214_g53799_i0forward_frame_3 - 0.0019 17.9 0.7 0.0042 16.8 0.7 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2733) DUF5357 PF17310.2 NODE_61734_length_264_cov_266.017467_g53794_i0forward_frame_2 - 0.1 11.1 2.0 0.11 11.0 2.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) YrhK PF14145.6 NODE_61733_length_264_cov_399.803493_g53793_i0reverse_frame_2 - 0.073 13.0 0.7 0.1 12.5 0.7 1.2 1 0 0 1 1 1 0 YrhK-like protein Flavi_capsid PF01003.19 NODE_61733_length_264_cov_399.803493_g53793_i0forward_frame_2 - 0.071 12.9 0.1 0.11 12.2 0.0 1.4 1 1 0 1 1 1 0 Flavivirus capsid protein C ArAE_2_N PF10337.9 NODE_61730_length_264_cov_562.965066_g53790_i0forward_frame_3 - 0.26 10.3 0.1 0.31 10.0 0.1 1.0 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal DEK_C PF08766.11 NODE_61729_length_264_cov_623.655022_g53789_i0reverse_frame_3 - 0.09 12.7 0.1 0.14 12.1 0.1 1.4 1 1 0 1 1 1 0 DEK C terminal domain DNA_binding_1 PF01035.20 NODE_61728_length_264_cov_659.218341_g53788_i0reverse_frame_3 - 0.056 13.6 0.1 0.069 13.3 0.1 1.3 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, DNA binding domain TA0956 PF11513.8 NODE_61727_length_264_cov_1546.842795_g53787_i0reverse_frame_2 - 0.051 13.8 0.1 0.06 13.6 0.1 1.2 1 0 0 1 1 1 0 Thermoplasma acidophilum protein TA0956 Popeye PF04831.13 NODE_61727_length_264_cov_1546.842795_g53787_i0forward_frame_3 - 1.6 8.9 9.4 1.9 8.7 9.4 1.2 1 0 0 1 1 1 0 Popeye protein conserved region Methyltransf_1N PF02870.15 ORF99742 - 0.18 12.7 0.0 0.21 12.4 0.0 1.2 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DUF465 PF04325.13 ORF991 - 0.018 15.1 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF465) BBS2_N PF14781.6 ORF991 - 0.12 12.2 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal DUF3290 PF11694.8 ORF98584 - 0.12 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) FAM221 PF14753.6 ORF98541 - 0.052 13.1 0.0 0.072 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein FAM221A/B DM PF00751.18 ORF98475 - 0.34 10.9 11.6 0.59 10.1 1.6 2.5 2 1 1 3 3 3 0 DM DNA binding domain DM PF00751.18 ORF98449 - 7.8 6.5 12.2 6.5 6.7 2.8 2.5 2 1 0 2 2 2 0 DM DNA binding domain PetG PF02529.15 ORF98320 - 0.073 12.9 0.8 0.12 12.2 0.8 1.4 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit 5 Ribosomal_L12 PF00542.19 ORF97940 - 4.3e-20 71.8 6.3 6e-20 71.4 6.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L22 PF00237.19 ORF97940 - 0.11 12.7 0.3 0.2 11.9 0.2 1.6 1 1 0 1 1 1 0 Ribosomal protein L22p/L17e YWFCY PF14293.6 ORF97665 - 1.4 9.2 9.0 0.54 10.6 2.2 2.4 1 1 1 2 2 2 0 YWFCY protein FancD2 PF14631.6 ORF9741 - 0.0047 14.4 0.8 0.0047 14.4 0.8 1.1 1 0 0 1 1 1 1 Fanconi anaemia protein FancD2 nuclease MARVEL PF01284.23 ORF9741 - 0.034 14.2 0.2 0.042 13.9 0.2 1.1 1 0 0 1 1 1 0 Membrane-associating domain DUF1176 PF06674.11 ORF97224 - 0.22 10.9 2.4 0.26 10.7 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1176) DnaJ PF00226.31 ORF9710 - 0.19 11.9 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 DnaJ domain DUF4171 PF13775.6 ORF96760 - 0.044 14.2 11.7 0.05 14.1 11.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4171) Thioredoxin_11 PF18078.1 ORF96710 - 0.12 12.5 5.3 0.034 14.3 2.4 1.6 1 1 1 2 2 2 0 Thioredoxin-like SNTX domain DUF2884 PF11101.8 ORF95969 - 0.021 14.4 0.5 0.023 14.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) FOP_dimer PF09398.10 ORF94473 - 0.017 15.4 0.0 0.02 15.2 0.0 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain DUF717 PF05338.12 ORF94116 - 0.015 15.4 0.0 0.02 15.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF717) BAMBI PF06211.12 ORF93948 - 0.057 13.7 2.1 0.069 13.4 2.1 1.3 1 0 0 1 1 1 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain Pollen_Ole_e_I PF01190.17 ORF93948 - 0.085 13.3 4.7 0.73 10.3 0.3 2.1 1 1 1 2 2 2 0 Pollen proteins Ole e I like Adipogenin PF15202.6 ORF93906 - 0.00029 20.8 0.2 0.00037 20.5 0.2 1.2 1 0 0 1 1 1 1 Adipogenin Peptidase_C101 PF16218.5 ORF93906 - 0.15 11.3 0.1 0.15 11.3 0.1 1.3 1 1 0 1 1 1 0 Peptidase family C101 Oxidored-like PF09791.9 ORF9342 - 0.067 12.9 2.2 0.11 12.2 2.2 1.3 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal Stanniocalcin PF03298.13 ORF92922 - 0.15 11.3 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Stanniocalcin family ExbD PF02472.16 ORF92868 - 0.23 11.6 0.0 0.28 11.4 0.0 1.1 1 0 0 1 1 1 0 Biopolymer transport protein ExbD/TolR Cir_Bir_Yir PF06022.11 ORF92345 - 0.015 14.8 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 Plasmodium variant antigen protein Cir/Yir/Bir Occludin_ELL PF07303.13 ORF92345 - 0.02 15.6 0.1 0.025 15.3 0.1 1.2 1 0 0 1 1 1 0 Occludin homology domain DUF3015 PF11220.8 ORF92154 - 0.15 11.9 0.3 0.24 11.3 0.3 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3015) JAMP PF05571.12 ORF91955 - 1.9 8.0 4.6 0.47 10.0 1.2 1.6 2 0 0 2 2 2 0 JNK1/MAPK8-associated membrane protein DUF4887 PF16228.5 ORF91372 - 0.0028 17.9 0.0 0.0031 17.7 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4887) Ribosomal_L11 PF00298.19 ORF91248 - 4.1e-13 49.6 0.0 4.8e-13 49.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain CorC_HlyC PF03471.17 ORF91248 - 0.037 14.0 0.0 0.047 13.7 0.0 1.2 1 0 0 1 1 1 0 Transporter associated domain CRCB PF02537.15 ORF91193 - 0.0086 16.4 4.0 0.01 16.2 4.0 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) Orthoreo_P10 PF07204.11 ORF91193 - 0.01 15.8 1.8 0.019 14.9 1.8 1.5 1 1 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DinB PF05163.12 ORF90886 - 0.015 15.2 0.1 0.023 14.6 0.1 1.3 1 0 0 1 1 1 0 DinB family BRCT_3 PF18428.1 ORF89013 - 0.018 15.1 0.0 0.021 14.9 0.0 1.2 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain DnaJ PF00226.31 ORF88358 - 0.19 11.9 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 DnaJ domain OrgA_MxiK PF09482.10 ORF88138 - 0.031 14.1 0.1 0.032 14.1 0.1 1.1 1 0 0 1 1 1 0 Bacterial type III secretion apparatus protein (OrgA_MxiK) RINGv PF12906.7 ORF88138 - 0.073 13.2 0.1 0.13 12.4 0.1 1.4 1 0 0 1 1 1 0 RING-variant domain UCR_hinge PF02320.16 ORF88021 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein Spexin PF15171.6 ORF87772 - 0.19 12.0 0.1 0.46 10.7 0.0 1.6 2 0 0 2 2 2 0 Neuropeptide secretory protein family, NPQ, spexin Mannosyl_trans4 PF15971.5 ORF87526 - 0.057 13.3 0.2 0.06 13.2 0.2 1.0 1 0 0 1 1 1 0 DolP-mannose mannosyltransferase PRELI PF04707.14 ORF87445 - 0.077 12.8 0.0 0.079 12.8 0.0 1.0 1 0 0 1 1 1 0 PRELI-like family DUF3974 PF13120.6 ORF87445 - 0.13 12.4 0.4 0.14 12.2 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) TMEM164 PF14808.6 ORF86776 - 0.1 11.9 3.7 0.12 11.7 3.7 1.1 1 0 0 1 1 1 0 TMEM164 family DSPn PF14671.6 ORF86400 - 0.0049 17.3 0.9 0.0056 17.1 0.9 1.4 1 1 0 1 1 1 1 Dual specificity protein phosphatase, N-terminal half DUF1700 PF08006.11 ORF85548 - 0.19 11.3 2.2 0.23 11.0 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) TMEM43 PF07787.12 ORF85548 - 1.5 8.1 4.5 1.9 7.8 4.5 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 OPA3 PF07047.12 ORF85504 - 0.036 13.8 0.9 0.041 13.7 0.9 1.1 1 0 0 1 1 1 0 Optic atrophy 3 protein (OPA3) LAGLIDADG_2 PF03161.13 ORF8530 - 0.0025 17.8 0.0 0.0032 17.5 0.0 1.0 1 0 0 1 1 1 1 LAGLIDADG DNA endonuclease family DUF5389 PF17364.2 ORF83440 - 0.016 15.2 0.4 0.019 15.0 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5389) YAF2_RYBP PF17219.3 ORF82499 - 1.3 8.6 2.9 0.93 9.1 0.2 1.9 2 0 0 2 2 2 0 Yaf2/RYBP C-terminal binding motif CGI-121 PF08617.10 ORF81881 - 0.24 11.5 0.0 0.27 11.3 0.0 1.1 1 0 0 1 1 1 0 Kinase binding protein CGI-121 DNA_ligase_OB_2 PF14743.6 ORF80879 - 4.2e-29 100.4 0.4 5e-29 100.1 0.4 1.1 1 0 0 1 1 1 1 DNA ligase OB-like domain Mannosyl_trans4 PF15971.5 ORF80788 - 0.057 13.3 0.2 0.06 13.2 0.2 1.0 1 0 0 1 1 1 0 DolP-mannose mannosyltransferase Oxidored-like PF09791.9 ORF80787 - 0.067 12.9 2.2 0.11 12.2 2.2 1.3 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal DUF4477 PF14780.6 ORF80762 - 0.0061 16.2 2.1 0.0063 16.2 2.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4477) VTC PF09359.10 ORF80762 - 0.09 12.2 0.1 0.099 12.0 0.1 1.1 1 0 0 1 1 1 0 VTC domain Phage_NinH PF06322.11 ORF79154 - 0.093 12.6 0.6 0.35 10.8 0.1 1.9 2 0 0 2 2 2 0 Phage NinH protein TMEM101 PF15111.6 ORF79154 - 0.096 12.2 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 TMEM101 protein family FAM176 PF14851.6 ORF78811 - 0.11 12.2 0.3 0.13 12.0 0.3 1.1 1 0 0 1 1 1 0 FAM176 family PBP1_TM PF14812.6 ORF78811 - 0.15 12.5 3.7 0.24 11.8 3.7 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal PBP_sp32 PF07222.12 ORF77624 - 0.19 11.2 0.1 0.23 10.9 0.1 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 AAA_10 PF12846.7 ORF7713 - 0.099 11.5 1.0 0.1 11.5 1.0 1.0 1 0 0 1 1 1 0 AAA-like domain COX17 PF05051.13 ORF7713 - 0.24 11.8 2.9 0.21 12.0 1.2 1.7 2 0 0 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) DUF3084 PF11283.8 ORF7713 - 1.9 8.5 6.1 2 8.5 0.5 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3084) EbsA PF17255.2 ORF75828 - 1.2 9.5 10.6 1.5 9.2 10.6 1.3 1 0 0 1 1 1 0 EbsA-like protein Bacillus_HBL PF05791.11 ORF75556 - 0.03 14.1 0.4 0.037 13.9 0.4 1.1 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) BEN PF10523.9 ORF75556 - 0.069 13.4 0.1 0.082 13.1 0.1 1.2 1 0 0 1 1 1 0 BEN domain Ninjurin PF04923.12 ORF75377 - 0.023 14.6 2.5 0.023 14.6 2.5 1.6 1 1 1 2 2 2 0 Ninjurin S10_plectin PF03501.15 ORF75129 - 0.21 11.7 0.0 0.27 11.3 0.0 1.1 1 0 0 1 1 1 0 Plectin/S10 domain B277 PF17623.2 ORF74638 - 6.1 5.8 5.2 1.8 7.6 2.1 1.6 2 0 0 2 2 2 0 Domain of unknown function DUF533 PF04391.12 ORF74412 - 0.19 11.3 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF533) DUF4594 PF15266.6 ORF73762 - 0.0028 18.0 0.0 0.0035 17.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4594) LepB_GAP_N PF18172.1 ORF73737 - 0.013 15.4 1.3 0.015 15.2 1.3 1.0 1 0 0 1 1 1 0 LepB GAP domain N-terminal subdomain Chordopox_A20R PF05941.13 ORF73737 - 0.016 14.2 0.1 0.018 14.1 0.1 1.1 1 0 0 1 1 1 0 Chordopoxvirus A20R protein DUF4242 PF14026.6 ORF73737 - 0.025 14.8 0.1 0.032 14.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4242) START PF01852.19 ORF73691 - 1.4e-10 40.9 0.0 1.6e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 START domain Granulin PF00396.18 ORF73491 - 0.23 11.8 5.3 0.91 9.9 0.1 2.3 2 0 0 2 2 2 0 Granulin dsrm PF00035.26 ORF72700 - 0.15 12.8 0.2 0.29 11.9 0.2 1.6 1 1 0 1 1 1 0 Double-stranded RNA binding motif Prp19 PF08606.11 ORF72617 - 0.015 15.3 0.4 0.027 14.4 0.4 1.4 1 0 0 1 1 1 0 Prp19/Pso4-like KLRAQ PF10205.9 ORF72617 - 0.016 15.4 2.4 0.022 15.0 2.4 1.1 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein DivIC PF04977.15 ORF72617 - 0.023 14.5 2.3 0.023 14.5 2.3 1.8 2 0 0 2 2 2 0 Septum formation initiator Coagulin PF02035.15 ORF72084 - 0.053 13.4 1.9 0.1 12.5 0.9 1.7 1 1 1 2 2 2 0 Coagulin T4SS_TraI PF16932.5 ORF72067 - 0.0085 15.3 0.0 0.0097 15.1 0.0 1.1 1 0 0 1 1 1 1 Type IV secretory system, conjugal DNA-protein transfer LRR19-TM PF15176.6 ORF71993 - 0.051 13.6 0.9 0.059 13.4 0.9 1.3 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain MH1 PF03165.16 ORF71928 - 0.073 13.3 0.1 0.077 13.2 0.1 1.1 1 0 0 1 1 1 0 MH1 domain TA0956 PF11513.8 ORF71915 - 0.22 11.8 0.3 0.36 11.1 0.2 1.5 1 1 1 2 2 2 0 Thermoplasma acidophilum protein TA0956 Cys_rich_VLP PF14194.6 ORF71496 - 0.31 11.2 5.1 0.47 10.6 0.1 2.3 2 1 0 2 2 2 0 Cysteine-rich VLP Nuf2 PF03800.14 ORF71088 - 0.0025 17.9 0.5 0.0028 17.8 0.5 1.1 1 0 0 1 1 1 1 Nuf2 family HHV-1_VABD PF16852.5 ORF70624 - 0.018 15.1 1.0 0.018 15.1 1.0 2.2 2 0 0 2 2 2 0 Herpes viral adaptor-to-host cellular mRNA binding domain TA0956 PF11513.8 ORF70590 - 0.21 11.8 0.3 0.36 11.1 0.2 1.5 1 1 1 2 2 2 0 Thermoplasma acidophilum protein TA0956 dsrm PF00035.26 ORF70551 - 0.15 12.8 0.2 0.29 11.9 0.2 1.6 1 1 0 1 1 1 0 Double-stranded RNA binding motif CD52 PF15116.6 ORF69416 - 0.15 12.1 0.6 0.23 11.5 0.6 1.4 1 0 0 1 1 1 0 CAMPATH-1 antigen DUF2873 PF11395.8 ORF69164 - 0.012 15.4 8.1 0.021 14.7 8.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2873) CD52 PF15116.6 ORF69029 - 0.051 13.6 0.7 0.1 12.6 0.7 1.5 1 0 0 1 1 1 0 CAMPATH-1 antigen DUF2873 PF11395.8 ORF68754 - 0.012 15.4 8.1 0.021 14.7 8.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2873) Ribosomal_S3_C PF00189.20 ORF68711 - 0.097 13.2 0.1 0.15 12.6 0.1 1.4 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain Dynactin_p22 PF07426.11 ORF68706 - 3.7e-06 26.9 1.5 4.6e-06 26.6 1.5 1.1 1 0 0 1 1 1 1 Dynactin subunit p22 LEDGF PF11467.8 ORF68706 - 0.044 13.4 0.2 0.21 11.2 0.2 1.9 1 1 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) UL11 PF11094.8 ORF68524 - 0.1 12.5 0.3 0.17 11.8 0.3 1.3 1 0 0 1 1 1 0 Membrane-associated tegument protein Mg_chelatase PF01078.21 ORF67986 - 0.014 14.8 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF4116 PF13475.6 ORF65824 - 0.15 11.8 5.0 0.25 11.1 5.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4116) ChAPs PF09295.10 ORF6443 - 0.05 12.6 0.1 0.061 12.3 0.1 1.0 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) EVC2_like PF12297.8 ORF64194 - 0.14 10.9 0.5 0.15 10.7 0.5 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein PGC7_Stella PF15549.6 ORF64152 - 0.097 12.7 2.3 0.12 12.3 2.3 1.2 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain zf-LITAF-like PF10601.9 ORF63649 - 1 9.7 7.4 1.8 8.9 7.4 1.4 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain CBP_BcsG PF11658.8 ORF63500 - 0.47 8.8 3.8 0.56 8.5 3.8 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG SAYSvFN PF10260.9 ORF62829 - 0.31 11.0 3.5 0.31 11.0 2.7 1.5 1 1 1 2 2 2 0 Uncharacterized conserved domain (SAYSvFN) DUF2512 PF10710.9 ORF62754 - 0.16 11.7 4.7 0.25 11.0 4.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2512) RabGAP-TBC PF00566.18 ORF62563 - 1.4e-06 28.1 0.1 2e-06 27.6 0.1 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Fer4_7 PF12838.7 ORF61997 - 0.0035 17.9 0.9 0.004 17.7 0.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF61997 - 0.0039 17.6 1.1 0.0043 17.5 1.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF61997 - 0.16 12.1 6.6 0.21 11.8 5.6 1.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 ORF61997 - 0.53 10.2 7.9 0.14 12.0 4.7 1.8 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 ORF61997 - 1 10.5 7.4 2.3 9.4 7.4 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain RRM_1 PF00076.22 ORF61931 - 8.9e-06 25.4 0.0 1.6e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DnaJ PF00226.31 ORF58702 - 0.19 11.9 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 DnaJ domain NTF2 PF02136.20 ORF58451 - 1.2e-15 58.1 0.0 1.4e-15 58.0 0.0 1.0 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain Zn_Tnp_IS91 PF14319.6 ORF56639 - 0.015 15.3 0.8 0.021 14.9 0.8 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain DUF366 PF04017.12 ORF56638 - 0.06 12.8 0.0 0.061 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF366) SH3_15 PF18346.1 ORF55977 - 0.0021 18.3 0.9 0.0057 16.9 0.9 1.7 1 1 0 1 1 1 1 Mind bomb SH3 repeat domain Ferric_reduct PF01794.19 ORF55787 - 0.0044 17.1 0.2 0.0044 17.1 0.2 1.1 1 0 0 1 1 1 1 Ferric reductase like transmembrane component DUF3852 PF12963.7 ORF55787 - 0.12 12.8 0.4 0.15 12.4 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3852) CHORD PF04968.12 ORF55475 - 9.5e-07 29.5 4.4 1.5e-06 28.8 4.4 1.3 1 0 0 1 1 1 1 CHORD CysG_dimeriser PF10414.9 ORF54047 - 3.2 7.6 11.9 68 3.3 11.9 2.2 1 1 0 1 1 1 0 Sirohaem synthase dimerisation region LANC_like PF05147.13 ORF53224 - 0.23 10.0 1.3 0.28 9.7 1.3 1.1 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein AvrM-A PF18241.1 ORF52883 - 0.017 15.5 2.2 0.021 15.2 2.2 1.1 1 0 0 1 1 1 0 Flax-rust effector AvrM-A Inhibitor_G39P PF11417.8 ORF52883 - 0.041 14.4 0.5 0.061 13.9 0.4 1.4 1 1 0 1 1 1 0 Loader and inhibitor of phage G40P eIF-4B PF06273.11 ORF52883 - 0.75 8.8 5.1 0.87 8.6 5.1 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B DUF1589 PF07628.11 ORF52347 - 0.00066 19.9 2.0 0.00081 19.6 2.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1589) Birna_VP3 PF01767.16 ORF52347 - 0.02 15.0 0.1 0.022 14.8 0.1 1.2 1 0 0 1 1 1 0 Birnavirus VP3 protein cNMP_binding PF00027.29 ORF52096 - 2.4e-07 30.7 0.0 2.8e-07 30.5 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain CAF-1_p60_C PF15512.6 ORF51459 - 0.0073 16.8 4.4 0.0082 16.6 4.4 1.0 1 0 0 1 1 1 1 Chromatin assembly factor complex 1 subunit p60, C-terminal RRM_1 PF00076.22 ORF51326 - 0.041 13.7 0.0 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-C2H2 PF00096.26 ORF51167 - 4.2e-10 39.5 7.0 2.7e-05 24.4 0.7 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF51167 - 9e-09 35.5 6.8 3.1e-05 24.5 0.6 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2HC_2 PF13913.6 ORF51167 - 0.0001 22.1 5.1 0.0089 15.9 0.9 2.5 2 0 0 2 2 2 2 zinc-finger of a C2HC-type FOXP-CC PF16159.5 ORF51167 - 0.00023 21.7 2.8 0.12 13.0 0.4 2.1 2 0 0 2 2 2 2 FOXP coiled-coil domain zf-Di19 PF05605.12 ORF51167 - 0.00062 20.0 2.1 0.0019 18.4 0.1 2.1 1 1 1 2 2 2 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_aberr PF17017.5 ORF51167 - 0.0013 18.9 0.5 0.0013 18.9 0.5 1.9 2 0 0 2 2 2 1 Aberrant zinc-finger zf-C2H2_jaz PF12171.8 ORF51167 - 0.0014 18.9 0.3 0.0014 18.9 0.3 2.3 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_2 PF12756.7 ORF51167 - 0.0041 17.4 3.1 0.75 10.2 0.2 2.1 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 ORF51167 - 0.007 16.1 0.7 0.007 16.1 0.7 1.8 2 0 0 2 2 2 1 zinc-finger C2H2-type Zn-ribbon_8 PF09723.10 ORF51167 - 0.0079 16.3 1.6 0.015 15.4 1.6 1.5 1 1 0 1 1 1 1 Zinc ribbon domain zf-C2H2_8 PF15909.5 ORF51167 - 0.0091 16.3 1.5 0.011 16.0 1.5 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-BED PF02892.15 ORF51167 - 0.032 14.3 6.1 0.53 10.4 2.6 2.3 1 1 1 2 2 2 0 BED zinc finger DpnI PF06044.12 ORF51167 - 0.035 13.8 0.6 0.035 13.7 0.6 1.1 1 0 0 1 1 1 0 Dam-replacing family zf-met PF12874.7 ORF51167 - 0.044 14.2 0.8 0.044 14.2 0.8 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-HYPF PF07503.12 ORF51167 - 0.058 13.2 1.1 0.17 11.6 1.1 1.8 1 1 0 1 1 1 0 HypF finger zf-C2H2_9 PF16293.5 ORF51167 - 0.08 12.8 0.3 0.42 10.5 0.0 1.9 2 0 0 2 2 2 0 C2H2 type zinc-finger (1 copy) Ogr_Delta PF04606.12 ORF51167 - 0.11 12.5 0.7 2.3 8.2 0.1 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Arc_trans_TRASH PF08394.10 ORF51167 - 0.19 12.1 2.5 1.2 9.5 0.4 2.2 2 0 0 2 2 2 0 Archaeal TRASH domain Zn_ribbon_SprT PF17283.2 ORF51167 - 0.28 11.1 5.5 2.7 8.0 3.4 2.7 1 1 1 2 2 2 0 SprT-like zinc ribbon domain Rad50_zn_hook PF04423.14 ORF51167 - 0.32 10.9 1.9 1.9 8.4 0.3 2.5 2 1 0 2 2 2 0 Rad50 zinc hook motif DUF2256 PF10013.9 ORF51167 - 0.39 10.9 3.2 7.2 6.8 0.1 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) HNH PF01844.23 ORF51167 - 0.42 10.8 4.5 1.6 9.0 0.5 2.4 2 1 0 2 2 2 0 HNH endonuclease zf-H2C2_2 PF13465.6 ORF51167 - 3 8.5 15.6 0.14 12.7 5.6 2.8 3 0 0 3 3 3 0 Zinc-finger double domain Complex1_LYR PF05347.15 ORF51037 - 0.00034 20.6 0.5 0.00044 20.2 0.5 1.2 1 0 0 1 1 1 1 Complex 1 protein (LYR family) DM PF00751.18 ORF5073 - 7.8 6.5 12.2 6.5 6.7 2.8 2.5 2 1 0 2 2 2 0 DM DNA binding domain YcgR PF07317.12 ORF50268 - 0.05 13.5 0.0 0.065 13.1 0.0 1.1 1 0 0 1 1 1 0 Flagellar regulator YcgR DUF1145 PF06611.12 ORF50137 - 0.055 13.4 8.5 0.092 12.7 8.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1145) TrkA_TMD PF18613.1 ORF50137 - 4.7 6.7 11.0 5.7 6.5 0.9 2.7 2 0 0 2 2 2 0 Tyrosine kinase receptor A trans-membrane domain EspG PF06872.11 ORF49939 - 0.11 11.1 0.0 0.12 10.9 0.0 1.0 1 0 0 1 1 1 0 EspG protein DUF957 PF06117.11 ORF49939 - 0.16 11.6 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 Enterobacterial protein of unknown function (DUF957) DUF1840 PF08895.11 ORF49837 - 0.051 13.9 0.4 0.062 13.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) DUF493 PF04359.14 ORF49534 - 8.7e-29 99.9 0.0 9.7e-29 99.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF493) HisG_C PF08029.11 ORF49534 - 0.0084 16.2 0.1 0.011 15.9 0.1 1.2 1 0 0 1 1 1 1 HisG, C-terminal domain ATP-cone PF03477.16 ORF49380 - 0.013 16.1 2.6 0.085 13.4 0.5 2.5 2 1 0 2 2 2 0 ATP cone domain DUF885 PF05960.11 ORF48990 - 0.29 10.8 0.7 0.34 10.5 0.7 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) DUF4105 PF13387.6 ORF48895 - 0.19 11.4 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4105) Acetyltransf_1 PF00583.25 ORF48009 - 1.8e-09 37.8 0.0 2.5e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF48009 - 0.002 18.5 0.0 0.0028 18.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Sep15_SelM PF08806.11 ORF48009 - 0.039 14.1 0.0 0.053 13.7 0.0 1.2 1 0 0 1 1 1 0 Sep15/SelM redox domain FR47 PF08445.10 ORF48009 - 0.051 13.5 0.0 0.07 13.1 0.0 1.2 1 0 0 1 1 1 0 FR47-like protein TEX13 PF15186.6 ORF47557 - 0.95 9.1 7.6 1 9.0 7.6 1.1 1 0 0 1 1 1 0 Testis-expressed sequence 13 protein family AhpC-TSA PF00578.21 ORF46965 - 0.13 12.2 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 AhpC/TSA family Cys_rich_VLP PF14194.6 ORF46952 - 0.31 11.2 5.1 0.47 10.6 0.1 2.3 2 1 0 2 2 2 0 Cysteine-rich VLP DUF4116 PF13475.6 ORF4674 - 0.27 11.0 3.0 1.2 9.0 1.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4116) Yeast-kill-tox PF09207.11 ORF46520 - 0.099 13.3 0.0 0.13 12.9 0.0 1.1 1 0 0 1 1 1 0 Yeast killer toxin Oxidored-like PF09791.9 ORF45728 - 0.067 12.9 2.2 0.11 12.2 2.2 1.3 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal UCR_hinge PF02320.16 ORF45619 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein BaffR-Tall_bind PF09256.10 ORF43183 - 0.11 12.3 0.1 0.19 11.5 0.1 1.4 1 0 0 1 1 1 0 BAFF-R, TALL-1 binding SLATT_5 PF18160.1 ORF42967 - 0.49 9.7 1.8 0.46 9.8 1.1 1.3 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 LSM PF01423.22 ORF42952 - 6.7e-21 73.8 0.0 7.8e-21 73.5 0.0 1.1 1 0 0 1 1 1 1 LSM domain PEP-CTERM PF07589.11 ORF42202 - 0.083 13.0 0.1 0.15 12.2 0.1 1.4 1 0 0 1 1 1 0 PEP-CTERM motif QIL1 PF15884.5 ORF41794 - 0.074 13.6 0.0 0.1 13.2 0.0 1.2 1 0 0 1 1 1 0 MICOS complex subunit MIC13, QIL1 UCR_hinge PF02320.16 ORF4050 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein WES_acyltransf PF03007.16 ORF4029 - 0.035 13.9 0.0 0.04 13.7 0.0 1.0 1 0 0 1 1 1 0 Wax ester synthase-like Acyl-CoA acyltransferase domain PMP22_Claudin PF00822.20 ORF40191 - 0.011 15.6 0.1 0.013 15.4 0.1 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family MFS_3 PF05977.13 ORF40191 - 0.018 13.4 0.1 0.019 13.4 0.1 1.0 1 0 0 1 1 1 0 Transmembrane secretion effector Band_7 PF01145.25 ORF40086 - 1.1e-13 51.6 0.0 1.1e-13 51.5 0.0 1.0 1 0 0 1 1 1 1 SPFH domain / Band 7 family FANCI_S3 PF14677.6 ORF3862 - 0.03 14.0 0.7 0.032 13.9 0.7 1.1 1 0 0 1 1 1 0 FANCI solenoid 3 PARG_cat PF05028.14 ORF38500 - 0.018 14.3 0.4 0.02 14.2 0.4 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) EAL PF00563.20 ORF37678 - 0.00015 21.4 0.0 0.00017 21.2 0.0 1.0 1 0 0 1 1 1 1 EAL domain DUF5461 PF17545.2 ORF37596 - 0.15 12.4 0.1 0.22 11.9 0.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5461) Tmemb_9 PF05434.11 ORF37391 - 0.1 12.5 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 TMEM9 Centro_C10orf90 PF17730.1 ORF36193 - 0.072 11.9 0.1 0.14 10.9 0.1 1.4 2 0 0 2 2 2 0 Centrosomal C10orf90 zf_C2H2_6 PF18450.1 ORF36063 - 7.4 6.4 10.2 7.3 6.4 1.1 2.6 2 1 0 2 2 2 0 Zinc Finger domain Mg_chelatase PF01078.21 ORF35648 - 0.014 14.8 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ATP-synt_DE PF00401.20 ORF35206 - 3.3e-06 27.3 7.0 4.3e-06 26.9 7.0 1.2 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ptaRNA1_toxin PF12703.7 ORF35206 - 0.015 15.4 0.1 0.03 14.4 0.1 1.5 1 0 0 1 1 1 0 Toxin of toxin-antitoxin type 1 system Exo84_C PF16528.5 ORF35206 - 0.025 14.4 0.6 0.029 14.2 0.6 1.0 1 0 0 1 1 1 0 Exocyst component 84 C-terminal PRIMA1 PF16101.5 ORF34626 - 0.048 13.7 0.2 0.056 13.5 0.2 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Pkr1 PF08636.10 ORF34038 - 0.28 11.3 6.2 0.082 13.1 3.2 1.6 2 0 0 2 2 2 0 ER protein Pkr1 Mso1_C PF14477.6 ORF33559 - 0.1 13.0 0.2 0.17 12.3 0.2 1.3 1 0 0 1 1 1 0 Membrane-polarising domain of Mso1 Bacillus_HBL PF05791.11 ORF33116 - 0.03 14.1 0.4 0.037 13.9 0.4 1.1 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) BEN PF10523.9 ORF33116 - 0.069 13.4 0.1 0.082 13.1 0.1 1.2 1 0 0 1 1 1 0 BEN domain Oxidored-like PF09791.9 ORF32921 - 0.067 12.9 2.2 0.11 12.2 2.2 1.3 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal RWD PF05773.22 ORF31684 - 0.082 13.2 0.0 0.082 13.2 0.0 1.1 1 0 0 1 1 1 0 RWD domain Es2 PF09751.9 ORF31474 - 3.1 7.4 8.9 3.2 7.4 8.9 1.0 1 0 0 1 1 1 0 Nuclear protein Es2 PARP_regulatory PF01358.18 ORF31259 - 0.0034 16.4 0.8 0.0036 16.3 0.8 1.1 1 0 0 1 1 1 1 Poly A polymerase regulatory subunit MlaA PF04333.13 ORF31259 - 0.031 14.0 0.1 0.033 13.9 0.1 1.1 1 0 0 1 1 1 0 MlaA lipoprotein IL3Ra_N PF18611.1 ORF30739 - 0.067 13.2 0.2 0.088 12.8 0.2 1.1 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain Tnp_DNA_bind PF14706.6 ORF30386 - 0.077 12.9 0.4 8.1 6.4 0.0 2.3 2 1 0 2 2 2 0 Transposase DNA-binding DUF5560 PF17715.1 ORF30230 - 0.02 14.4 2.8 0.022 14.2 2.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) LysM PF01476.20 ORF30089 - 0.14 12.3 1.3 0.35 11.0 0.2 2.0 2 1 0 2 2 2 0 LysM domain Baculo_LEF-10 PF07206.11 ORF29389 - 0.2 11.9 0.0 0.51 10.5 0.0 1.6 2 0 0 2 2 2 0 Baculovirus late expression factor 10 (LEF-10) TruB-C_2 PF09157.11 ORF28414 - 0.042 13.9 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Pseudouridine synthase II TruB, C-terminal TBCC PF07986.12 ORF2828 - 0.12 12.1 0.0 0.12 12.1 0.0 1.8 1 1 1 2 2 2 0 Tubulin binding cofactor C CbiQ PF02361.16 ORF28059 - 0.058 13.0 0.3 0.061 12.9 0.3 1.0 1 0 0 1 1 1 0 Cobalt transport protein Disulph_isomer PF06491.11 ORF27823 - 0.057 13.5 0.1 0.067 13.3 0.1 1.2 1 0 0 1 1 1 0 Disulphide isomerase Toxin_27 PF08099.11 ORF25706 - 0.043 13.9 2.5 0.079 13.1 0.4 2.3 2 0 0 2 2 2 0 Scorpion calcine family DMAP1_like PF17024.5 ORF25181 - 0.046 13.9 0.0 0.059 13.5 0.0 1.1 1 0 0 1 1 1 0 Putative DMAP1-like DUF1758 PF05585.12 ORF25100 - 0.096 12.4 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Putative peptidase (DUF1758) DMAP1_like PF17024.5 ORF24170 - 0.046 13.9 0.0 0.059 13.5 0.0 1.1 1 0 0 1 1 1 0 Putative DMAP1-like Anthrax_toxA PF03497.16 ORF23866 - 0.0087 16.2 0.4 0.01 16.0 0.4 1.1 1 0 0 1 1 1 1 Anthrax toxin LF subunit DUF2616 PF11077.8 ORF2359 - 0.0091 15.7 5.8 0.01 15.5 5.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2616) PGC7_Stella PF15549.6 ORF21985 - 0.097 12.7 2.3 0.12 12.3 2.3 1.2 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain O-ag_pol_Wzy PF14296.6 ORF2160 - 0.071 11.8 9.0 0.083 11.5 9.0 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy Mg_chelatase PF01078.21 ORF21524 - 0.014 14.8 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF5541 PF17695.1 ORF20857 - 3.1 8.3 5.3 3.3 8.2 1.1 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5541) PDZ_2 PF13180.6 ORF2011 - 9.2e-05 22.7 0.0 0.00012 22.4 0.0 1.1 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF2011 - 0.048 14.0 0.0 0.06 13.7 0.0 1.3 1 0 0 1 1 1 0 PDZ domain DUF1145 PF06611.12 ORF19228 - 0.11 12.5 0.2 0.16 12.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1145) AhpC-TSA PF00578.21 ORF19189 - 0.13 12.2 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 AhpC/TSA family DUF465 PF04325.13 ORF1811 - 0.018 15.1 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF465) BBS2_N PF14781.6 ORF1811 - 0.12 12.2 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Herpes_UL7 PF01677.16 ORF17527 - 0.025 14.3 0.8 0.028 14.1 0.8 1.1 1 0 0 1 1 1 0 Herpesvirus UL7 like Baculo_11_kDa PF06143.11 ORF16275 - 0.012 15.2 0.2 0.013 15.0 0.2 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family Erg28 PF03694.13 ORF16275 - 0.023 15.1 0.3 0.031 14.7 0.2 1.3 1 1 0 1 1 1 0 Erg28 like protein ELO PF01151.18 ORF16275 - 0.044 13.3 2.3 0.049 13.2 2.3 1.0 1 0 0 1 1 1 0 GNS1/SUR4 family Piezo_RRas_bdg PF12166.8 ORF16275 - 0.051 12.8 0.1 0.051 12.8 0.1 1.0 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain SRTM1 PF15872.5 ORF16275 - 0.084 13.0 0.1 0.09 12.9 0.1 1.2 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 Hydrolase_4 PF12146.8 ORF152960 - 7.3e-08 32.0 0.1 8.9e-08 31.7 0.1 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF152960 - 1.1e-06 28.5 0.0 1.3e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 ORF152960 - 0.0001 22.0 0.1 0.00011 21.9 0.1 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF152960 - 0.0013 18.3 0.1 0.0014 18.1 0.1 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family PhoPQ_related PF10142.9 ORF152960 - 0.0056 15.4 0.0 0.0056 15.4 0.0 1.0 1 0 0 1 1 1 1 PhoPQ-activated pathogenicity-related protein Abhydrolase_2 PF02230.16 ORF152960 - 0.0062 16.4 0.1 0.0076 16.1 0.1 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 ORF152960 - 0.023 14.8 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 TAP-like protein FSH1 PF03959.13 ORF152960 - 0.03 14.0 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Peptidase_S15 PF02129.18 ORF152960 - 0.15 11.6 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Sas6_CC PF18594.1 ORF152638 - 1.8 8.4 5.7 20 5.1 1.7 2.4 2 0 0 2 2 2 0 Sas6/XLF/XRCC4 coiled-coil domain Motile_Sperm PF00635.26 ORF152278 - 0.044 13.6 0.2 0.056 13.3 0.2 1.2 1 0 0 1 1 1 0 MSP (Major sperm protein) domain CD20 PF04103.15 ORF151878 - 0.012 15.7 0.2 0.015 15.3 0.2 1.2 1 0 0 1 1 1 0 CD20-like family CTX_RstB PF07459.11 ORF151831 - 0.063 13.5 0.2 0.18 12.1 0.1 1.7 2 0 0 2 2 2 0 CTX phage RstB protein RAP1 PF07218.11 ORF151831 - 4.4 5.5 4.3 4.6 5.4 4.3 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF4477 PF14780.6 ORF151644 - 0.0061 16.2 2.1 0.0063 16.2 2.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4477) VTC PF09359.10 ORF151644 - 0.09 12.2 0.1 0.099 12.0 0.1 1.1 1 0 0 1 1 1 0 VTC domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks309.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks309.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks309.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks309.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aldedh PF00171.22 ORF122314 - 9e-118 393.7 0.0 1e-117 393.5 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF2239 PF09998.9 ORF119130 - 0.016 15.0 0.1 0.033 14.0 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) MMADHC PF10229.9 ORF115231 - 6.8 6.4 9.4 3.9 7.2 5.4 2.4 2 1 0 2 2 2 0 Methylmalonic aciduria and homocystinuria type D protein Abhydrolase_1 PF00561.20 ORF105402 - 1.1e-16 61.2 0.1 2.5e-12 47.0 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF105402 - 3.1e-13 49.1 0.0 6.6e-13 48.0 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF105402 - 1.1e-06 28.1 0.0 0.019 14.3 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_5 PF12695.7 ORF105402 - 0.00034 20.4 0.0 0.0054 16.5 0.0 2.4 3 0 0 3 3 3 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF105402 - 0.011 15.2 0.4 0.096 12.2 0.0 2.3 2 1 0 2 2 2 0 Prolyl oligopeptidase family FSH1 PF03959.13 ORF105402 - 0.032 13.9 0.0 0.15 11.7 0.0 2.1 3 0 0 3 3 3 0 Serine hydrolase (FSH1) AXE1 PF05448.12 ORF105402 - 0.054 12.2 0.1 0.15 10.7 0.1 1.7 1 1 0 1 1 1 0 Acetyl xylan esterase (AXE1) BAAT_C PF08840.11 ORF105402 - 0.095 12.6 0.0 3.5 7.5 0.0 2.3 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Tubulin-binding PF00418.19 ORF105402 - 1.1 9.4 3.6 12 6.0 0.0 3.0 3 0 0 3 3 3 0 Tau and MAP protein, tubulin-binding repeat DUF2615 PF11027.8 ORF102981 - 0.097 12.8 0.1 3.5 7.8 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2615) PIG-F PF06699.11 ORF102981 - 0.71 10.0 7.3 7.4 6.7 7.3 2.2 1 1 0 1 1 1 0 GPI biosynthesis protein family Pig-F GWT1 PF06423.12 ORF102981 - 9.1 6.4 13.8 4.3e+02 1.0 13.8 2.6 1 1 0 1 1 1 0 GWT1 DNA_ligase_A_N PF04675.14 NODE_11215_length_1311_cov_100.856583_g8316_i0reverse_frame_2 - 2.1e-31 109.5 0.1 4.1e-31 108.6 0.1 1.5 1 0 0 1 1 1 1 DNA ligase N terminus CCDC66 PF15236.6 ORF90646 - 0.073 12.9 5.1 0.18 11.6 5.1 1.6 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 66 TPR_22 PF18833.1 ORF90646 - 0.58 10.3 4.7 2.2 8.5 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat Pribosyltran PF00156.27 ORF88895 - 7.4e-08 32.1 0.0 1.2e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 ORF88895 - 0.0084 15.6 0.0 0.018 14.6 0.0 1.5 2 0 0 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.6 ORF88895 - 0.0091 15.5 0.0 0.015 14.7 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Terminase_5 PF06056.12 ORF88895 - 0.077 12.9 0.1 0.34 10.8 0.0 2.1 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) adh_short PF00106.25 ORF83052 - 1.4e-42 145.4 6.4 2.8e-42 144.4 6.4 1.5 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF83052 - 1.8e-32 112.8 3.0 2.7e-32 112.2 3.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase SCP2 PF02036.17 ORF83052 - 5.2e-18 65.4 0.1 1.2e-17 64.3 0.1 1.5 1 0 0 1 1 1 1 SCP-2 sterol transfer family KR PF08659.10 ORF83052 - 5.8e-17 62.2 1.0 9.4e-17 61.5 1.0 1.3 1 0 0 1 1 1 1 KR domain Alkyl_sulf_C PF14864.6 ORF83052 - 0.00061 20.1 0.0 0.0028 17.9 0.0 2.0 3 0 0 3 3 3 1 Alkyl sulfatase C-terminal DUF3837 PF12939.7 ORF83052 - 0.069 13.6 0.1 2 8.9 0.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) CobN-Mg_chel PF02514.16 ORF83052 - 0.071 10.8 0.0 1.5 6.5 0.0 2.0 2 0 0 2 2 2 0 CobN/Magnesium Chelatase PIG-X PF08320.12 ORF78468 - 0.084 12.8 0.1 0.18 11.7 0.1 1.5 1 0 0 1 1 1 0 PIG-X / PBN1 DUF4116 PF13475.6 ORF77345 - 9.7e-43 143.7 0.0 1.3e-12 47.2 0.0 5.6 4 2 0 4 4 4 4 Domain of unknown function (DUF4116) ubiquitin PF00240.23 ORF77345 - 0.0026 17.5 0.0 0.039 13.7 0.0 2.6 3 0 0 3 3 3 1 Ubiquitin family Glyco_tran_WecB PF03808.13 ORF77345 - 0.016 15.2 0.2 3.2 7.7 0.0 2.9 3 0 0 3 3 3 0 Glycosyl transferase WecB/TagA/CpsF family Spore_SspJ PF09575.10 ORF77345 - 0.17 12.3 3.1 38 4.8 0.1 4.1 4 0 0 4 4 4 0 Small spore protein J (Spore_SspJ) bPH_6 PF10756.9 ORF77345 - 5 7.3 9.4 6.5 6.9 0.0 4.4 3 2 1 4 4 4 0 Bacterial PH domain Sulfotransfer_3 PF13469.6 ORF75940 - 1.5e-08 35.3 0.1 1.7e-06 28.6 0.1 2.4 2 0 0 2 2 2 2 Sulfotransferase family Sulfotransfer_1 PF00685.27 ORF75940 - 1.4e-06 28.0 0.5 5.7e-05 22.7 0.4 2.4 2 0 0 2 2 2 1 Sulfotransferase domain CHDCT2 PF08074.11 ORF75940 - 0.0079 16.4 0.1 0.015 15.5 0.1 1.5 1 0 0 1 1 1 1 CHDCT2 (NUC038) domain DUF2054 PF10218.9 ORF66272 - 0.051 13.7 0.7 0.11 12.6 0.2 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2054) Mak16 PF04874.14 ORF66272 - 0.42 11.2 3.5 1.5 9.5 0.5 2.6 2 0 0 2 2 2 0 Mak16 protein C-terminal region PB1 PF00564.24 ORF54928 - 1.6e-10 40.7 0.0 5.3e-10 39.1 0.0 1.9 1 0 0 1 1 1 1 PB1 domain N_BRCA1_IG PF16158.5 ORF54928 - 4.8e-05 24.0 0.1 0.0001 23.0 0.1 1.5 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene Glyco_transf_41 PF13844.6 ORF54928 - 0.012 14.1 1.8 0.021 13.3 1.8 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 41 Tombus_movement PF05318.12 ORF4939 - 0.39 11.6 4.4 2.6 9.0 0.1 3.0 3 0 0 3 3 3 0 Tombusvirus movement protein Orthopox_F6 PF06601.12 ORF34822 - 0.041 14.1 1.0 0.2 11.8 0.2 2.4 1 1 1 2 2 2 0 Orthopoxvirus F6 protein DUF573 PF04504.14 ORF34822 - 1.4 9.6 9.0 1.3 9.7 0.1 3.6 2 1 1 3 3 3 0 Protein of unknown function, DUF573 MA3 PF02847.17 ORF34690 - 0.046 13.7 0.3 0.096 12.7 0.3 1.4 1 0 0 1 1 1 0 MA3 domain adh_short PF00106.25 ORF145918 - 1.4e-42 145.4 6.4 2.8e-42 144.4 6.4 1.5 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF145918 - 1.8e-32 112.8 3.0 2.7e-32 112.2 3.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase SCP2 PF02036.17 ORF145918 - 5.2e-18 65.4 0.1 1.2e-17 64.3 0.1 1.5 1 0 0 1 1 1 1 SCP-2 sterol transfer family KR PF08659.10 ORF145918 - 5.8e-17 62.2 1.0 9.4e-17 61.5 1.0 1.3 1 0 0 1 1 1 1 KR domain Alkyl_sulf_C PF14864.6 ORF145918 - 0.00061 20.1 0.0 0.0028 17.9 0.0 2.0 3 0 0 3 3 3 1 Alkyl sulfatase C-terminal DUF3837 PF12939.7 ORF145918 - 0.069 13.6 0.1 2 8.9 0.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) CobN-Mg_chel PF02514.16 ORF145918 - 0.071 10.8 0.0 1.5 6.5 0.0 2.0 2 0 0 2 2 2 0 CobN/Magnesium Chelatase DUF4502 PF14950.6 ORF134663 - 0.18 11.2 3.1 0.26 10.7 3.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4502) DUF2054 PF10218.9 ORF13241 - 0.051 13.7 0.7 0.11 12.6 0.2 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2054) Mak16 PF04874.14 ORF13241 - 0.42 11.2 3.5 1.5 9.5 0.5 2.6 2 0 0 2 2 2 0 Mak16 protein C-terminal region Abhydro_lipase PF04083.16 ORF131651 - 1.1e-13 50.5 0.0 2.3e-13 49.5 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF131651 - 2.2e-13 50.5 0.1 9.4e-13 48.4 0.1 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF131651 - 2.9e-07 30.0 0.0 0.00026 20.3 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 ESSS PF10183.9 ORF131651 - 0.073 13.3 0.2 0.23 11.7 0.1 1.8 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) Abhydrolase_2 PF02230.16 ORF131651 - 0.079 12.7 0.0 0.27 11.0 0.0 1.7 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase FSH1 PF03959.13 ORF131651 - 0.13 11.9 0.0 3.2 7.4 0.0 2.1 2 0 0 2 2 2 0 Serine hydrolase (FSH1) Pro_CA PF00484.19 ORF127441 - 2.3e-64 216.4 0.0 6.6e-35 120.7 0.0 2.1 2 0 0 2 2 2 2 Carbonic anhydrase Antimicrobial24 PF16049.5 ORF127441 - 0.38 10.8 1.5 4.2 7.4 0.1 2.4 2 0 0 2 2 2 0 Frog antimicrobial peptide adh_short PF00106.25 ORF118232 - 1.4e-42 145.4 6.4 2.8e-42 144.4 6.4 1.5 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF118232 - 1.8e-32 112.8 3.0 2.7e-32 112.2 3.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase SCP2 PF02036.17 ORF118232 - 5.2e-18 65.4 0.1 1.2e-17 64.3 0.1 1.5 1 0 0 1 1 1 1 SCP-2 sterol transfer family KR PF08659.10 ORF118232 - 5.8e-17 62.2 1.0 9.4e-17 61.5 1.0 1.3 1 0 0 1 1 1 1 KR domain Alkyl_sulf_C PF14864.6 ORF118232 - 0.00061 20.1 0.0 0.0028 17.9 0.0 2.0 3 0 0 3 3 3 1 Alkyl sulfatase C-terminal DUF3837 PF12939.7 ORF118232 - 0.069 13.6 0.1 2 8.9 0.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) CobN-Mg_chel PF02514.16 ORF118232 - 0.071 10.8 0.0 1.5 6.5 0.0 2.0 2 0 0 2 2 2 0 CobN/Magnesium Chelatase Exo_endo_phos PF03372.23 ORF11037 - 6.4e-12 45.5 0.0 2.1e-11 43.8 0.0 1.9 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Abhydro_lipase PF04083.16 ORF104137 - 1.1e-13 50.5 0.0 2.3e-13 49.5 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF104137 - 2.2e-13 50.5 0.1 9.4e-13 48.4 0.1 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF104137 - 2.9e-07 30.0 0.0 0.00026 20.3 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 ESSS PF10183.9 ORF104137 - 0.073 13.3 0.2 0.23 11.7 0.1 1.8 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) Abhydrolase_2 PF02230.16 ORF104137 - 0.079 12.7 0.0 0.27 11.0 0.0 1.7 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase FSH1 PF03959.13 ORF104137 - 0.13 11.9 0.0 3.2 7.4 0.0 2.1 2 0 0 2 2 2 0 Serine hydrolase (FSH1) Abhydro_lipase PF04083.16 ORF9133 - 7.3e-17 60.7 0.2 2.2e-16 59.1 0.0 1.9 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF9133 - 1.9e-14 53.9 0.0 1.5e-13 51.0 0.0 2.0 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF9133 - 2e-05 24.0 0.0 0.00023 20.5 0.0 2.0 2 0 0 2 2 2 1 Serine aminopeptidase, S33 SelA PF03841.13 ORF90156 - 1.2 8.1 5.0 0.93 8.4 2.8 1.8 2 1 1 3 3 3 0 L-seryl-tRNA selenium transferase AKAP7_NLS PF10469.9 ORF90156 - 1.3 8.9 7.0 3.1 7.6 6.8 1.6 1 1 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain FIN1 PF17300.2 ORF90156 - 8.2 5.8 11.9 12 5.3 11.9 1.3 1 0 0 1 1 1 0 Filaments in between nuclei protein-1 DUF1810 PF08837.11 ORF86258 - 7.3e-23 80.9 0.0 1.1e-22 80.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1810) Peptidase_C1 PF00112.23 ORF81519 - 4.5e-13 49.8 0.0 1.1e-12 48.5 0.0 1.7 1 1 0 1 1 1 1 Papain family cysteine protease DUF4175 PF13779.6 ORF81519 - 0.081 10.8 0.0 0.13 10.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) Sel1 PF08238.12 ORF78847 - 1.4e-46 155.8 38.1 2.9e-07 30.9 0.2 10.3 11 0 0 11 11 10 8 Sel1 repeat TPR_7 PF13176.6 ORF78847 - 3.9e-06 26.5 16.5 0.24 11.5 0.1 7.3 7 1 1 8 8 8 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF78847 - 6.4e-05 23.3 24.9 4.1 8.3 0.1 8.5 9 1 0 9 9 9 2 Tetratricopeptide repeat PPR PF01535.20 ORF78847 - 0.00018 21.5 11.1 7.2 7.1 0.0 7.9 9 0 0 9 9 9 1 PPR repeat TPR_3 PF07720.12 ORF78847 - 0.00043 20.2 13.4 2.5 8.2 0.2 5.8 6 0 0 6 6 6 1 Tetratricopeptide repeat Ntox27 PF15531.6 ORF78847 - 0.013 15.3 0.2 1.9 8.4 0.0 3.3 1 1 1 3 3 3 0 Bacterial toxin 27 VIT PF08487.10 ORF78847 - 0.017 15.4 4.5 13 6.1 0.1 4.8 3 2 2 5 5 5 0 Vault protein inter-alpha-trypsin domain ComR_TPR PF18710.1 ORF78847 - 0.088 12.3 1.4 26 4.3 0.0 4.3 4 1 2 6 6 6 0 ComR tetratricopeptide MIT PF04212.18 ORF78847 - 0.13 12.4 8.7 34 4.6 0.2 5.6 5 1 0 5 5 5 0 MIT (microtubule interacting and transport) domain ASXH PF13919.6 ORF78847 - 0.16 12.0 0.1 0.28 11.2 0.1 1.3 1 0 0 1 1 1 0 Asx homology domain GUN4_N PF16416.5 ORF78847 - 0.19 11.8 0.0 8.9 6.4 0.0 3.2 3 1 1 4 4 4 0 ARM-like repeat domain, GUN4-N terminal TPR_14 PF13428.6 ORF78847 - 0.29 12.0 14.9 14 6.9 0.2 6.6 5 2 3 8 8 7 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF78847 - 0.94 9.7 28.9 21 5.6 0.1 8.4 8 1 0 8 8 8 0 Tetratricopeptide repeat zf-C3H2C3 PF17122.5 ORF78165 - 0.0063 16.5 3.5 0.0063 16.5 3.5 3.3 3 0 0 3 3 3 1 Zinc-finger zf-RING_2 PF13639.6 ORF78165 - 0.035 14.4 3.6 0.035 14.4 3.6 2.9 4 0 0 4 4 4 0 Ring finger domain zf-rbx1 PF12678.7 ORF78165 - 0.045 14.0 5.1 0.13 12.6 5.1 1.8 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF78165 - 0.11 12.5 10.0 0.52 10.3 10.0 2.1 1 1 0 1 1 1 0 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF78165 - 2.7 7.9 14.0 0.7 9.8 5.2 2.9 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Abhydro_lipase PF04083.16 ORF58656 - 2.9e-15 55.6 0.0 5.5e-15 54.7 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF58656 - 9.6e-11 41.8 0.4 9.6e-10 38.5 0.4 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF58656 - 0.016 14.5 0.0 0.56 9.4 0.0 2.4 2 1 0 2 2 2 0 Serine aminopeptidase, S33 MurJ PF03023.14 ORF53989 - 1.9e-06 26.8 1.1 1.9e-06 26.8 1.1 2.6 2 1 0 2 2 2 1 Lipid II flippase MurJ MatE PF01554.18 ORF53989 - 2.5e-06 27.3 26.6 8.8e-05 22.2 6.9 3.5 2 1 1 3 3 3 2 MatE Polysacc_synt_C PF14667.6 ORF53989 - 5.7e-06 26.5 0.4 5.7e-06 26.5 0.4 3.9 3 1 1 5 5 5 1 Polysaccharide biosynthesis C-terminal domain DUF2512 PF10710.9 ORF53989 - 0.35 10.5 0.1 0.35 10.5 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2512) HET PF06985.11 ORF53132 - 0.073 13.4 0.0 0.23 11.8 0.0 1.8 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) Aa_trans PF01490.18 ORF48627 - 1.9e-26 92.7 18.1 1.9e-26 92.7 18.1 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein Exo_endo_phos PF03372.23 ORF43144 - 7e-22 78.1 0.1 1.8e-21 76.8 0.1 1.6 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Biotin_carb_C PF02785.19 ORF27971 - 1.9e-38 130.9 0.0 4.9e-38 129.5 0.0 1.7 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain CPSase_L_D2 PF02786.17 ORF27971 - 7.1e-22 77.9 0.0 1.4e-21 77.0 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_lipoyl PF00364.22 ORF27971 - 1.3e-14 53.8 0.3 3.6e-14 52.4 0.3 1.8 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 ORF27971 - 0.00014 21.6 0.3 0.00036 20.3 0.0 1.9 2 0 0 2 2 2 1 Biotin-lipoyl like HlyD_3 PF13437.6 ORF27971 - 0.02 15.6 0.0 0.46 11.2 0.0 2.8 2 1 0 2 2 2 0 HlyD family secretion protein HlyD_D23 PF16576.5 ORF27971 - 0.088 12.0 0.0 0.22 10.7 0.0 1.6 1 1 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion DUF4116 PF13475.6 ORF27956 - 1.1e-54 182.0 0.0 9.7e-10 38.0 0.0 7.1 6 1 1 7 7 7 7 Domain of unknown function (DUF4116) Bestrophin PF01062.21 ORF23040 - 3.3e-29 102.2 0.5 5e-29 101.6 0.5 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF2919 PF11143.8 ORF23040 - 0.017 15.4 0.5 0.042 14.2 0.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2919) zf-C3H2C3 PF17122.5 ORF22572 - 0.0063 16.5 3.5 0.0063 16.5 3.5 3.3 3 0 0 3 3 3 1 Zinc-finger zf-RING_2 PF13639.6 ORF22572 - 0.035 14.4 3.6 0.035 14.4 3.6 2.9 4 0 0 4 4 4 0 Ring finger domain zf-rbx1 PF12678.7 ORF22572 - 0.045 14.0 5.1 0.13 12.6 5.1 1.8 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF22572 - 0.11 12.5 10.0 0.52 10.3 10.0 2.1 1 1 0 1 1 1 0 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF22572 - 2.7 7.9 14.0 0.7 9.8 5.2 2.9 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Acyl_transf_3 PF01757.22 ORF152916 - 4.4e-13 49.0 31.4 5.5e-13 48.7 31.4 1.1 1 0 0 1 1 1 1 Acyltransferase family Glyco_hydro_31 PF01055.26 ORF14901 - 8.2e-59 199.9 0.1 1e-58 199.6 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF14901 - 0.045 14.0 0.0 0.092 13.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) Abhydro_lipase PF04083.16 ORF144616 - 9.4e-17 60.4 1.3 2.2e-16 59.1 0.0 2.3 3 0 0 3 3 3 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF144616 - 6.4e-14 52.2 0.1 5.4e-13 49.2 0.0 2.0 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF144616 - 4.3e-06 26.2 0.0 0.00015 21.2 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 FSH1 PF03959.13 ORF144616 - 0.029 14.0 0.1 0.42 10.2 0.0 2.1 2 0 0 2 2 2 0 Serine hydrolase (FSH1) DUF2576 PF10845.8 ORF137168 - 0.048 13.3 0.2 0.11 12.1 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) betaPIX_CC PF16523.5 ORF137168 - 0.074 12.9 6.0 0.28 11.0 1.6 2.7 1 1 1 2 2 2 0 betaPIX coiled coil NPV_P10 PF05531.12 ORF137168 - 0.074 13.5 1.0 0.33 11.4 0.6 2.4 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Spc7 PF08317.11 ORF137168 - 0.14 11.0 6.5 0.27 10.1 6.5 1.4 1 0 0 1 1 1 0 Spc7 kinetochore protein Na_H_Exchanger PF00999.21 ORF135018 - 6.5e-46 156.8 26.8 9.1e-46 156.4 26.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family MadM PF03818.13 ORF135018 - 0.043 13.7 0.8 0.043 13.7 0.8 4.1 4 1 0 4 4 4 0 Malonate/sodium symporter MadM subunit Aa_trans PF01490.18 ORF125425 - 1.9e-26 92.7 18.1 1.9e-26 92.7 18.1 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein AAA_14 PF13173.6 ORF120894 - 0.0088 16.1 1.1 0.035 14.2 1.1 2.1 1 0 0 1 1 1 1 AAA domain Rotamase_2 PF13145.6 ORF120894 - 0.017 15.9 0.8 1.8 9.4 0.1 2.6 2 0 0 2 2 2 0 PPIC-type PPIASE domain Angiomotin_C PF12240.8 ORF120894 - 0.042 13.4 2.0 0.11 12.0 0.5 2.4 2 1 0 2 2 2 0 Angiomotin C terminal NTP_transf_9 PF04248.12 ORF120894 - 0.078 12.9 0.4 1.5 8.8 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF427) Tup_N PF08581.10 ORF120894 - 2.7 8.3 6.5 3.7 7.9 3.0 2.9 2 1 1 3 3 3 0 Tup N-terminal DUF445 PF04286.12 ORF120894 - 7.4 6.3 11.4 1.6 8.4 7.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF445) Na_H_Exchanger PF00999.21 ORF120687 - 6.5e-46 156.8 26.8 9.1e-46 156.4 26.8 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family MadM PF03818.13 ORF120687 - 0.043 13.7 0.8 0.043 13.7 0.8 4.1 4 1 0 4 4 4 0 Malonate/sodium symporter MadM subunit MJ1316 PF04457.12 ORF110900 - 6.8e-11 42.8 1.0 2.3e-10 41.1 0.1 2.4 2 0 0 2 2 2 1 MJ1316 RNA cyclic group end recognition domain RCC1 PF00415.18 ORF110900 - 5.8e-07 30.0 0.0 1.4e-06 28.9 0.0 1.7 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat SAM_1 PF00536.30 ORF110900 - 1.7e-05 25.2 0.0 3.7e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 ORF110900 - 5.4e-05 23.2 0.0 0.00012 22.1 0.0 1.6 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Hamartin PF04388.12 ORF110900 - 0.021 13.5 4.2 0.029 13.1 4.2 1.1 1 0 0 1 1 1 0 Hamartin protein RCC1_2 PF13540.6 ORF110900 - 0.082 12.7 0.7 6.6 6.7 0.2 3.1 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat Presenilin PF01080.17 ORF110900 - 1.2 7.8 4.7 1.6 7.4 4.7 1.1 1 0 0 1 1 1 0 Presenilin AAA_11 PF13086.6 ORF110900 - 2.1 8.1 8.1 3.8 7.2 8.1 1.4 1 0 0 1 1 1 0 AAA domain Aa_trans PF01490.18 ORF104464 - 9.7e-27 93.7 19.4 9.7e-27 93.7 19.4 1.8 1 1 1 2 2 2 1 Transmembrane amino acid transporter protein Pkinase PF00069.25 NODE_11340_length_1304_cov_319.096927_g8417_i0reverse_frame_3 - 8.9e-57 192.4 0.1 1.3e-56 191.9 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_11340_length_1304_cov_319.096927_g8417_i0reverse_frame_3 - 1.2e-26 93.6 0.0 1.9e-26 92.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_11340_length_1304_cov_319.096927_g8417_i0reverse_frame_3 - 8.4e-08 31.9 0.0 1e-06 28.3 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 NODE_11340_length_1304_cov_319.096927_g8417_i0reverse_frame_3 - 0.00075 18.5 0.0 0.0011 18.0 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 NODE_11340_length_1304_cov_319.096927_g8417_i0reverse_frame_3 - 0.0059 15.4 0.0 0.0099 14.7 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase KA1 PF02149.19 NODE_11340_length_1304_cov_319.096927_g8417_i0reverse_frame_3 - 0.17 11.7 0.1 0.36 10.7 0.1 1.5 1 0 0 1 1 1 0 Kinase associated domain 1 TIP49_C PF17856.1 NODE_11340_length_1304_cov_319.096927_g8417_i0forward_frame_3 - 2.3 8.4 4.9 3.5 7.8 0.1 2.9 3 0 0 3 3 3 0 TIP49 AAA-lid domain Soc PF16855.5 NODE_11340_length_1304_cov_319.096927_g8417_i0forward_frame_2 - 0.09 13.3 0.0 0.2 12.2 0.0 1.6 1 0 0 1 1 1 0 Small outer capsid protein TPP_enzyme_N PF02776.18 ORF82082 - 1.8e-48 164.4 0.0 2.8e-48 163.8 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF82082 - 9.6e-34 116.1 0.0 1.9e-33 115.1 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 ORF82082 - 2.9e-05 23.9 0.2 0.00054 19.8 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO_dh PF02552.16 ORF82082 - 0.013 15.3 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit COX1 PF00115.20 ORF817 - 1.9e-90 303.8 44.1 2.2e-90 303.6 44.1 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I PKD_channel PF08016.12 ORF63780 - 1.9e-10 40.0 18.7 2.2e-10 39.8 18.1 1.4 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF63780 - 2.3e-07 30.3 25.0 2.3e-07 30.3 25.0 1.9 2 1 0 2 2 2 1 Ion transport protein H_PPase PF03030.16 ORF54653 - 2.2e-155 518.9 7.6 2.4e-155 518.8 7.6 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase His_Phos_2 PF00328.22 ORF49590 - 3.4e-15 56.3 12.6 9.7e-13 48.2 5.9 3.9 3 1 0 3 3 3 2 Histidine phosphatase superfamily (branch 2) LPD5 PF18799.1 ORF34153 - 0.23 11.9 4.9 0.41 11.0 4.9 1.4 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 5 HSP70 PF00012.20 ORF22250 - 4.1e-19 68.2 0.0 4.4e-10 38.4 0.0 2.1 2 0 0 2 2 2 2 Hsp70 protein MreB_Mbl PF06723.13 ORF22250 - 3.3e-09 36.0 0.1 2e-06 26.9 0.0 2.2 2 0 0 2 2 2 2 MreB/Mbl protein StbA PF06406.11 ORF22250 - 0.00099 18.4 0.0 0.018 14.3 0.0 2.6 2 1 0 2 2 2 1 StbA protein Ppx-GppA PF02541.16 ORF22250 - 0.026 14.0 0.1 0.056 12.9 0.1 1.4 1 0 0 1 1 1 0 Ppx/GppA phosphatase family DDR PF08841.10 ORF22250 - 0.03 13.3 0.0 0.15 11.0 0.0 1.8 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain MutL PF13941.6 ORF22250 - 0.088 11.4 0.0 0.2 10.2 0.0 1.5 2 0 0 2 2 2 0 MutL protein AnmK PF03702.14 ORF22250 - 0.089 11.9 0.0 0.18 10.8 0.0 1.4 1 0 0 1 1 1 0 Anhydro-N-acetylmuramic acid kinase EutA PF06277.11 ORF22250 - 0.13 11.1 0.0 0.56 9.0 0.0 1.8 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutA FGGY_C PF02782.16 ORF22250 - 0.15 11.8 0.0 0.4 10.4 0.0 1.7 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain Hydantoinase_A PF01968.18 ORF22250 - 0.17 11.1 0.0 0.61 9.3 0.0 1.8 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase ALG3 PF05208.13 ORF21168 - 1.8e-50 172.4 30.5 2.4e-50 172.0 30.5 1.0 1 0 0 1 1 1 1 ALG3 protein His_Phos_2 PF00328.22 ORF20357 - 3.6e-15 56.2 12.3 2.3e-12 47.0 5.7 3.9 3 1 0 3 3 3 2 Histidine phosphatase superfamily (branch 2) TTL PF03133.15 ORF16241 - 3.3e-82 275.9 0.6 5.7e-82 275.2 0.6 1.3 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF16241 - 1e-06 28.2 0.0 5.6e-05 22.5 0.0 2.6 2 1 0 2 2 2 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF16241 - 0.0016 17.8 0.0 0.2 10.9 0.0 2.7 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp NOA36 PF06524.12 ORF16241 - 3.9 6.7 6.3 10 5.3 6.3 1.7 1 0 0 1 1 1 0 NOA36 protein DUF1116 PF06545.11 ORF151687 - 3.7e-99 330.5 1.0 5e-99 330.1 1.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1116) His_Phos_2 PF00328.22 ORF147589 - 3.7e-15 56.2 12.4 2.1e-11 43.8 0.0 3.9 3 1 1 4 4 4 3 Histidine phosphatase superfamily (branch 2) IRK_C PF17655.1 ORF147589 - 0.039 13.5 0.0 0.076 12.6 0.0 1.4 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain ALG3 PF05208.13 ORF146559 - 1.2e-50 173.0 30.3 1.4e-50 172.8 30.3 1.1 1 0 0 1 1 1 1 ALG3 protein Aminotran_1_2 PF00155.21 ORF140724 - 1.4e-38 133.0 0.0 1.8e-38 132.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF140724 - 0.00021 20.4 0.0 0.0005 19.1 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF140724 - 0.0057 15.2 0.0 0.0084 14.7 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme zf-LSD1 PF06943.12 ORF134376 - 0.03 14.1 1.3 0.03 14.1 1.3 4.1 3 0 0 3 3 3 0 LSD1 zinc finger MFS_1 PF07690.16 ORF134302 - 6.7e-36 123.9 32.4 6.7e-36 123.9 32.4 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF134302 - 1.2e-08 34.3 5.6 1.2e-08 34.3 5.6 3.0 2 2 1 3 3 3 2 Sugar (and other) transporter Aminotran_1_2 PF00155.21 ORF133290 - 1.4e-38 133.0 0.0 1.8e-38 132.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF133290 - 0.00021 20.4 0.0 0.0005 19.1 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF133290 - 0.0057 15.2 0.0 0.0084 14.7 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Sulfotransfer_1 PF00685.27 ORF129479 - 2.6e-13 50.1 1.1 3.3e-12 46.5 0.7 2.1 2 0 0 2 2 2 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF129479 - 1.4e-07 32.2 0.1 1.7e-06 28.6 0.1 2.4 3 0 0 3 3 3 1 Sulfotransferase family ABC_membrane PF00664.23 ORF121943 - 1.3e-14 54.5 25.0 1.6e-14 54.2 25.0 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region CcmD PF04995.14 ORF121943 - 0.01 15.9 0.1 0.01 15.9 0.1 2.6 3 0 0 3 3 3 0 Heme exporter protein D (CcmD) Baculo_gp41 PF04700.12 ORF121943 - 0.089 12.6 3.2 3.4 7.4 0.5 3.0 3 0 0 3 3 3 0 Structural glycoprotein p40/gp41 conserved region Cys_Met_Meta_PP PF01053.20 ORF118860 - 2e-141 471.0 0.0 2.3e-141 470.8 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 ORF118860 - 3.5e-07 29.7 0.0 5.1e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF118860 - 0.00051 19.1 0.0 0.00087 18.3 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V SART-1 PF03343.13 ORF111577 - 6.7e-17 61.3 52.4 2e-10 39.9 0.4 2.4 2 1 1 3 3 3 2 SART-1 family YniB PF14002.6 ORF111577 - 7.7 6.3 7.6 3.6 7.3 2.0 2.5 2 0 0 2 2 2 0 YniB-like protein TPP_enzyme_N PF02776.18 ORF106092 - 1.8e-48 164.4 0.0 2.8e-48 163.8 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF106092 - 9.6e-34 116.1 0.0 1.9e-33 115.1 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 ORF106092 - 2.9e-05 23.9 0.2 0.00054 19.8 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO_dh PF02552.16 ORF106092 - 0.013 15.3 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit ALG3 PF05208.13 ORF10323 - 9.4e-57 193.1 21.2 1.1e-56 192.8 21.2 1.1 1 0 0 1 1 1 1 ALG3 protein PseudoU_synth_2 PF00849.22 ORF95155 - 1.6e-16 60.8 0.0 2.2e-16 60.4 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF3035 PF11233.8 ORF94479 - 0.098 12.9 0.0 0.22 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) APG6 PF04111.12 ORF81692 - 0.012 15.6 0.3 0.028 14.4 0.3 1.6 1 0 0 1 1 1 0 Apg6 BARA domain Selenoprotein_S PF06936.11 ORF81692 - 0.056 13.2 0.0 0.17 11.7 0.0 1.8 1 0 0 1 1 1 0 Selenoprotein S (SelS) Pro_isomerase PF00160.21 ORF81482 - 1.8e-44 151.8 0.6 3e-44 151.1 0.1 1.7 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SYF2 PF08231.12 ORF81482 - 7.8e-23 81.6 26.3 7.8e-23 81.6 26.3 3.1 1 1 1 2 2 2 1 SYF2 splicing factor PFO_beta_C PF12367.8 ORF81482 - 0.41 10.8 3.1 0.27 11.4 0.3 2.1 2 0 0 2 2 2 0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal DUF3135 PF11333.8 ORF81482 - 0.62 10.4 5.8 4 7.8 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3135) FYVE_2 PF02318.16 ORF81482 - 6.5 7.0 14.1 3.6 7.8 2.4 2.9 2 1 0 2 2 2 0 FYVE-type zinc finger SBBP PF06739.11 ORF80134 - 8.7e-17 60.8 14.5 0.00089 19.2 0.1 7.2 8 0 0 8 8 8 5 Beta-propeller repeat DUF5122 PF17164.4 ORF80134 - 0.0042 17.3 21.9 1 9.7 0.4 6.4 6 0 0 6 6 6 2 Domain of unknown function (DUF5122) beta-propeller Reg_prop PF07494.11 ORF80134 - 0.015 15.4 2.6 80 4.0 0.0 5.1 5 0 0 5 5 5 0 Two component regulator propeller PAS_3 PF08447.12 ORF80134 - 0.052 13.8 10.9 7.4 6.9 0.0 5.1 6 0 0 6 6 6 0 PAS fold DUF746 PF05344.11 ORF80134 - 0.096 12.5 1.1 17 5.4 0.1 3.5 4 0 0 4 4 4 0 Domain of Unknown Function (DUF746) TAP_C PF03943.13 ORF80134 - 0.46 10.1 1.4 20 4.9 0.0 3.2 3 0 0 3 3 3 0 TAP C-terminal domain Phage_lysozyme2 PF18013.1 ORF80134 - 6.7 6.7 6.1 16 5.5 0.1 3.5 4 0 0 4 4 4 0 Phage tail lysozyme Chal_sti_synt_N PF00195.19 ORF7612 - 0.0074 15.7 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Chalcone and stilbene synthases, N-terminal domain CYTH PF01928.21 ORF62723 - 3.1e-39 134.8 0.0 6e-39 133.8 0.0 1.5 1 0 0 1 1 1 1 CYTH domain DUF758 PF05527.11 ORF62723 - 0.0078 16.2 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF758) EF-hand_13 PF17958.1 ORF62505 - 2.6e-36 123.3 0.1 8.1e-36 121.7 0.1 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF62505 - 9.7e-21 74.0 16.3 1.5e-13 51.0 2.8 4.2 4 2 0 4 4 4 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF62505 - 4.6e-13 47.9 9.4 0.023 14.6 0.1 5.7 5 0 0 5 5 5 4 EF-hand domain EF-hand_1 PF00036.32 ORF62505 - 3.3e-12 45.0 13.3 0.016 14.7 0.1 6.3 6 0 0 6 6 6 4 EF hand EF-hand_8 PF13833.6 ORF62505 - 3.6e-09 36.3 10.5 0.0039 17.0 0.3 5.1 4 1 0 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF62505 - 6.2e-06 25.5 8.1 0.021 14.3 0.1 4.4 4 0 0 4 4 4 3 EF hand NEMP PF10225.9 ORF60683 - 2.2 7.9 6.3 0.57 9.8 0.9 2.4 2 0 0 2 2 2 0 NEMP family kleA_kleC PF17383.2 ORF60683 - 8.9 6.7 12.8 2.2 8.7 2.0 2.9 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A Pkinase PF00069.25 ORF598 - 1.9e-62 211.0 0.6 3e-62 210.4 0.6 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF598 - 4.1e-31 108.2 0.1 6.5e-31 107.5 0.1 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF598 - 1.5e-09 37.6 0.0 1.8e-05 24.2 0.0 2.2 2 0 0 2 2 2 2 Kinase-like Haspin_kinase PF12330.8 ORF598 - 0.0094 14.9 0.4 0.47 9.3 0.0 2.4 2 0 0 2 2 2 1 Haspin like kinase domain Kdo PF06293.14 ORF598 - 0.01 15.2 0.0 0.027 13.9 0.0 1.6 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF598 - 0.15 12.0 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family CD45 PF12567.8 ORF598 - 1.1 9.3 5.0 6.7 6.8 2.4 2.5 2 0 0 2 2 2 0 Leukocyte receptor CD45 DUF2353 PF09789.9 ORF49146 - 0.0022 17.4 0.0 0.0022 17.4 0.0 3.9 2 1 2 4 4 4 1 Uncharacterized coiled-coil protein (DUF2353) DUF4407 PF14362.6 ORF49146 - 0.034 13.5 71.6 1 8.7 28.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) Ten1_2 PF15490.6 ORF49146 - 0.49 10.1 11.7 1.2 8.8 1.6 3.1 2 1 1 3 3 3 0 Telomere-capping, CST complex subunit Ran-binding PF05508.11 ORF49146 - 0.91 8.4 31.7 0.28 10.1 6.1 2.9 1 1 2 3 3 3 0 RanGTP-binding protein DUF724 PF05266.14 ORF49146 - 1.3 8.9 53.9 0.13 12.1 12.2 3.6 2 1 2 4 4 4 0 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF49146 - 6.1 6.9 38.1 7.2 6.7 9.1 3.7 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 ORF49146 - 9.4 6.4 75.9 0.16 12.1 7.9 6.5 3 2 3 6 6 6 0 Centrosome localisation domain of PPC89 MORN PF02493.20 ORF49085 - 1.4e-44 147.4 57.8 4.3e-07 29.4 1.8 10.2 10 0 0 10 10 10 9 MORN repeat Tudor_2 PF18104.1 ORF49085 - 1.9e-06 27.5 8.4 0.42 10.3 0.1 5.5 5 0 0 5 5 5 4 Jumonji domain-containing protein 2A Tudor domain Cation_ATPase_C PF00689.21 ORF38585 - 3e-42 144.4 1.2 3e-42 144.4 1.2 1.9 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF38585 - 4.5e-08 33.6 0.3 2.2e-06 28.1 0.3 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF38585 - 0.0002 21.2 0.4 0.00054 19.8 0.4 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF962 PF06127.11 ORF38585 - 0.22 11.6 0.8 2 8.6 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF962) Pkinase PF00069.25 ORF27339 - 6.5e-74 248.6 0.0 8.4e-74 248.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF27339 - 8.4e-37 126.9 0.0 1.1e-36 126.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF27339 - 0.00017 21.3 0.2 0.17 11.5 0.2 2.3 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF27339 - 0.0053 15.6 0.0 0.0086 14.9 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Na_Ca_ex_C PF16494.5 ORF21284 - 0.64 10.5 3.0 6.1 7.3 0.1 2.5 2 1 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain Cation_ATPase_C PF00689.21 ORF16226 - 4.3e-08 33.1 7.8 4.3e-08 33.1 7.8 1.7 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus DUF2353 PF09789.9 ORF144438 - 0.0022 17.4 0.0 0.0022 17.4 0.0 3.9 2 1 2 4 4 4 1 Uncharacterized coiled-coil protein (DUF2353) DUF4407 PF14362.6 ORF144438 - 0.034 13.5 71.6 1 8.7 28.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) Ten1_2 PF15490.6 ORF144438 - 0.49 10.1 11.7 1.2 8.8 1.6 3.1 2 1 1 3 3 3 0 Telomere-capping, CST complex subunit Ran-binding PF05508.11 ORF144438 - 0.91 8.4 31.7 0.28 10.1 6.1 2.9 1 1 2 3 3 3 0 RanGTP-binding protein DUF724 PF05266.14 ORF144438 - 1.3 8.9 53.9 0.13 12.1 12.2 3.6 2 1 2 4 4 4 0 Protein of unknown function (DUF724) DUF1664 PF07889.12 ORF144438 - 6.1 6.9 38.1 7.2 6.7 9.1 3.7 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 ORF144438 - 9.4 6.4 75.9 0.16 12.1 7.9 6.5 3 2 3 6 6 6 0 Centrosome localisation domain of PPC89 LRR_4 PF12799.7 ORF141841 - 3.9e-18 65.3 29.7 4.1e-05 23.8 4.3 5.0 5 0 0 5 5 5 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF141841 - 1.4e-07 31.2 34.1 0.0071 16.1 2.9 5.1 3 1 3 6 6 6 5 Leucine rich repeat LRR_6 PF13516.6 ORF141841 - 0.00019 21.2 15.2 0.45 10.7 0.5 6.0 6 0 0 6 6 6 2 Leucine Rich repeat LRR_9 PF14580.6 ORF141841 - 0.00046 19.7 19.5 0.0011 18.5 1.2 3.4 1 1 2 3 3 3 3 Leucine-rich repeat Zip PF02535.22 ORF140985 - 0.12 11.6 0.1 0.17 11.0 0.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter RMI1_N PF08585.12 ORF139253 - 1.5e-07 31.4 3.2 3.7e-07 30.1 3.2 1.6 1 0 0 1 1 1 1 RecQ mediated genome instability protein DUF5365 PF17326.2 ORF139253 - 0.16 12.4 12.2 0.25 11.7 0.2 3.2 3 0 0 3 3 3 0 Family of unknown function (DUF5365) Tenui_NCP PF04876.12 ORF139253 - 0.33 10.5 3.3 0.21 11.2 0.5 2.1 2 0 0 2 2 2 0 Tenuivirus major non-capsid protein CPSase_L_D3 PF02787.19 ORF139253 - 1.3 9.4 7.1 0.33 11.3 2.7 2.5 2 2 0 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YjbH PF06082.11 ORF136978 - 5.6e-151 504.6 1.9 6.3e-151 504.4 1.9 1.0 1 0 0 1 1 1 1 Exopolysaccharide biosynthesis protein YbjH Methyltransf_25 PF13649.6 ORF13619 - 1.1e-09 38.8 0.1 3e-09 37.4 0.1 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF13619 - 4e-07 30.6 0.0 1e-06 29.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF13619 - 4.2e-05 23.5 0.0 7.2e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF13619 - 0.00057 19.7 0.0 0.00097 19.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF13619 - 0.00063 20.4 0.0 0.0018 19.0 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF13619 - 0.011 15.3 0.0 0.018 14.7 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Cation_efflux PF01545.21 ORF122343 - 0.048 13.4 0.7 1 9.1 0.0 2.3 2 1 0 2 2 2 0 Cation efflux family Glyco_hydro_14 PF01373.17 ORF122062 - 6.5e-105 351.4 0.5 7.4e-105 351.2 0.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 14 Glyco_hydro_35 PF01301.19 ORF122062 - 0.02 14.5 0.0 0.04 13.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyl hydrolases family 35 Glyco_hydro_42 PF02449.15 ORF122062 - 0.1 11.9 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase Zip PF02535.22 ORF119401 - 0.12 11.6 0.1 0.17 11.0 0.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter DUF5305 PF17231.2 ORF115376 - 0.015 14.7 1.6 2.1 7.7 0.0 3.6 4 0 0 4 4 4 0 Family of unknown function (DUF5305) DUF4577 PF15145.6 ORF115376 - 0.023 14.7 0.1 0.023 14.7 0.1 3.0 4 0 0 4 4 4 0 Domain of unknown function (DUF4577) DUF3328 PF11807.8 ORF115376 - 0.056 13.2 1.2 0.54 10.0 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3328) UL45 PF05473.12 ORF115376 - 0.066 12.8 0.4 13 5.4 0.1 2.4 2 0 0 2 2 2 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF872 PF05915.12 ORF115376 - 0.14 12.3 2.9 2 8.6 0.0 3.1 3 0 0 3 3 3 0 Eukaryotic protein of unknown function (DUF872) SIT PF15330.6 ORF115376 - 0.22 12.0 2.8 9.8 6.7 0.0 3.5 3 0 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT DUF2207 PF09972.9 ORF115376 - 9.6 4.8 23.5 0.74 8.5 0.0 4.0 2 1 1 3 3 3 0 Predicted membrane protein (DUF2207) Abhydro_lipase PF04083.16 ORF109997 - 3.5e-15 55.3 0.2 8.9e-15 54.0 0.0 1.8 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF109997 - 1.7e-14 54.1 0.3 4.8e-13 49.3 0.2 2.1 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF109997 - 0.00082 18.7 0.0 0.002 17.5 0.0 1.6 2 1 0 2 2 2 1 Serine aminopeptidase, S33 Cupin_5 PF06172.11 ORF109997 - 0.15 12.2 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 Cupin superfamily (DUF985) Thiolase_N PF00108.23 ORF10821 - 3.6e-62 210.1 3.7 5.5e-62 209.5 3.7 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF10821 - 1.4e-35 121.6 0.1 1.4e-35 121.6 0.1 2.3 3 0 0 3 3 3 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF10821 - 5e-06 26.3 0.5 1e-05 25.3 0.5 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Zip PF02535.22 ORF105618 - 0.02 14.1 0.1 0.029 13.6 0.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter EF-hand_7 PF13499.6 ORF105103 - 0.03 14.8 0.1 16 6.0 0.0 3.1 3 0 0 3 3 3 0 EF-hand domain pair DUF1397 PF07165.11 ORF97410 - 0.00019 20.9 3.1 0.0003 20.3 0.4 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1397) DUF1322 PF07032.11 ORF97410 - 0.22 12.1 6.3 0.082 13.4 1.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1322) PhoLip_ATPase_C PF16212.5 ORF97024 - 1.7e-69 234.4 32.8 2e-69 234.1 32.8 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase PF00702.26 ORF97024 - 0.018 15.3 0.0 0.028 14.7 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF97024 - 0.042 13.6 1.9 0.043 13.5 0.2 1.7 1 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase DUF2556 PF10831.8 ORF90645 - 0.02 14.8 0.7 0.02 14.8 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2556) ACR_tran PF00873.19 ORF76238 - 2e-171 572.0 0.0 2.3e-171 571.9 0.0 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 ORF76238 - 3.4e-06 26.2 5.4 5.3e-06 25.6 5.4 1.3 1 0 0 1 1 1 1 MMPL family SecD_SecF PF02355.16 ORF76238 - 3.9e-05 23.1 1.2 5.5e-05 22.6 1.2 1.2 1 0 0 1 1 1 1 Protein export membrane protein ADP_ribosyl_GH PF03747.14 ORF69063 - 2.1e-56 191.8 0.9 2.6e-56 191.5 0.9 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase TetR_C_16 PF17920.1 ORF69063 - 0.062 13.5 0.3 4.3 7.6 0.0 2.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TRH PF05438.12 ORF69062 - 0.053 13.3 0.0 0.095 12.4 0.0 1.3 1 0 0 1 1 1 0 Thyrotropin-releasing hormone (TRH) ABC_tran PF00005.27 ORF61759 - 3.7e-14 53.4 0.0 1.8e-13 51.2 0.0 2.1 3 0 0 3 3 3 1 ABC transporter AAA_21 PF13304.6 ORF61759 - 2.6e-10 40.6 0.0 1e-09 38.7 0.0 1.9 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF61759 - 0.00028 20.4 0.2 0.00091 18.7 0.0 1.8 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain FERM_C PF09380.10 ORF61759 - 0.064 13.7 0.1 0.61 10.5 0.0 2.3 2 0 0 2 2 2 0 FERM C-terminal PH-like domain SbcCD_C PF13558.6 ORF61759 - 0.12 12.6 0.0 1.9 8.8 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Glycos_transf_2 PF00535.26 ORF5534 - 0.0019 18.0 0.0 0.29 10.9 0.0 2.2 1 1 1 2 2 2 2 Glycosyl transferase family 2 UPF0121 PF03661.13 ORF52495 - 0.051 13.0 4.2 0.099 12.0 4.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) Sulfotransfer_1 PF00685.27 ORF48112 - 5.2e-11 42.5 0.5 1.9e-10 40.7 0.1 2.0 2 0 0 2 2 2 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF48112 - 3.9e-05 24.2 0.0 0.00014 22.3 0.0 1.9 2 0 0 2 2 2 1 Sulfotransferase family H_PPase PF03030.16 ORF4079 - 2.4e-28 99.2 2.1 3e-28 98.9 2.1 1.1 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase FAM176 PF14851.6 ORF4079 - 0.13 12.0 0.0 0.25 11.0 0.0 1.5 1 0 0 1 1 1 0 FAM176 family Sec62 PF03839.16 ORF4079 - 0.16 11.5 0.2 0.29 10.6 0.2 1.3 1 0 0 1 1 1 0 Translocation protein Sec62 DUF1514 PF07438.11 ORF38608 - 0.052 13.4 0.0 0.17 11.7 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1514) PD40 PF07676.12 ORF36823 - 3.9e-37 125.5 3.2 4.8e-10 39.1 0.1 6.1 6 0 0 6 6 6 4 WD40-like Beta Propeller Repeat TolB_N PF04052.13 ORF36823 - 4.3e-31 107.2 0.0 1.1e-30 105.9 0.0 1.7 1 0 0 1 1 1 1 TolB amino-terminal domain DPPIV_N PF00930.21 ORF36823 - 4.2e-12 45.5 0.0 1.5e-08 33.8 0.0 2.8 1 1 2 3 3 3 3 Dipeptidyl peptidase IV (DPP IV) N-terminal region Pectate_lyase22 PF14583.6 ORF36823 - 9e-10 37.8 0.2 0.00027 19.7 0.0 4.2 3 1 2 5 5 5 3 Oligogalacturonate lyase Gmad1 PF10647.9 ORF36823 - 6.8e-08 32.6 1.5 0.0006 19.6 0.2 3.6 2 1 1 3 3 3 2 Lipoprotein LpqB beta-propeller domain Peptidase_S9_N PF02897.15 ORF36823 - 0.00034 19.5 0.0 0.0024 16.7 0.0 2.0 2 0 0 2 2 2 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Lactonase PF10282.9 ORF36823 - 0.069 12.4 0.1 3.8 6.7 0.0 2.3 1 1 1 2 2 2 0 Lactonase, 7-bladed beta-propeller TcfC PF16967.5 ORF36823 - 0.17 11.4 0.3 4.7 6.8 0.0 2.9 3 0 0 3 3 3 0 E-set like domain Pkinase PF00069.25 ORF36594 - 4e-66 223.1 0.0 5.1e-66 222.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF36594 - 1e-32 113.5 0.0 1.4e-32 113.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF36594 - 0.00025 20.5 0.0 0.00084 18.7 0.0 1.7 1 1 0 2 2 2 1 Kinase-like Seadorna_VP7 PF07387.11 ORF36594 - 0.011 14.8 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Pkinase_fungal PF17667.1 ORF36594 - 0.046 12.5 0.0 0.13 11.0 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase Kdo PF06293.14 ORF36594 - 0.22 10.8 1.0 0.9 8.8 0.1 2.1 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family EF1G PF00647.19 ORF33565 - 0.032 14.3 0.1 0.088 12.9 0.1 1.8 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain Chloroa_b-bind PF00504.21 ORF23365 - 2.3e-51 174.5 1.5 3.1e-27 96.1 0.1 2.2 2 0 0 2 2 2 2 Chlorophyll A-B binding protein TPH PF13868.6 ORF148481 - 0.0021 16.6 94.8 0.0034 15.9 94.8 1.3 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain Adenylsucc_synt PF00709.21 ORF142619 - 1.2e-178 594.4 0.0 1.4e-178 594.2 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase TMEM214 PF10151.9 ORF142018 - 0.11 10.9 0.0 0.15 10.5 0.0 1.1 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator DUF4577 PF15145.6 ORF138158 - 0.1 12.6 0.1 0.1 12.6 0.1 3.2 3 1 1 4 4 4 0 Domain of unknown function (DUF4577) Adipogenin PF15202.6 ORF138158 - 0.52 10.4 5.3 1.3 9.1 0.0 3.8 3 0 0 3 3 3 0 Adipogenin DUF3328 PF11807.8 ORF138158 - 1.4 8.6 3.1 3.4 7.4 0.2 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3328) ABC_tran PF00005.27 ORF131469 - 2.2e-14 54.1 0.0 1.1e-13 51.9 0.0 2.1 3 0 0 3 3 3 1 ABC transporter AAA_21 PF13304.6 ORF131469 - 2.5e-10 40.7 0.0 9.3e-10 38.8 0.0 1.9 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF131469 - 0.00029 20.3 0.2 0.00088 18.8 0.0 1.8 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain FERM_C PF09380.10 ORF131469 - 0.067 13.6 0.1 0.61 10.5 0.0 2.4 2 0 0 2 2 2 0 FERM C-terminal PH-like domain SbcCD_C PF13558.6 ORF131469 - 0.12 12.6 0.0 1.9 8.8 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DAO PF01266.24 ORF130204 - 3.1e-73 247.4 0.4 3.7e-73 247.1 0.4 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF130204 - 1.7e-07 30.8 0.4 0.00029 20.2 0.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF130204 - 2.1e-07 31.4 0.0 6.1e-05 23.5 0.2 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF130204 - 9.3e-07 27.9 0.2 0.009 14.8 0.0 2.6 3 0 0 3 3 3 2 HI0933-like protein FAD_binding_2 PF00890.24 ORF130204 - 1e-06 28.1 2.1 0.015 14.4 1.5 2.3 2 1 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 ORF130204 - 1.5e-06 28.3 0.0 3.1e-05 24.1 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 ORF130204 - 1.4e-05 24.6 0.0 0.0023 17.3 0.0 2.1 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase ApbA PF02558.16 ORF130204 - 4.4e-05 23.2 0.2 9.6e-05 22.1 0.2 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA AlaDh_PNT_C PF01262.21 ORF130204 - 0.00019 20.8 0.1 0.00033 20.0 0.1 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 ORF130204 - 0.00045 19.9 0.1 0.0008 19.0 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pyr_redox_3 PF13738.6 ORF130204 - 0.0011 18.3 0.1 0.78 8.9 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF130204 - 0.0024 17.2 0.7 0.016 14.5 0.2 2.0 2 0 0 2 2 2 1 FAD binding domain Trp_halogenase PF04820.14 ORF130204 - 0.003 16.5 0.2 1.7 7.4 0.3 2.3 2 0 0 2 2 2 2 Tryptophan halogenase 3HCDH_N PF02737.18 ORF130204 - 0.0032 17.4 0.6 0.0065 16.4 0.1 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GDI PF00996.18 ORF130204 - 0.012 14.1 0.0 0.047 12.2 0.0 1.7 2 0 0 2 2 2 0 GDP dissociation inhibitor XdhC_C PF13478.6 ORF130204 - 0.019 15.4 0.0 0.095 13.2 0.0 2.2 3 0 0 3 3 2 0 XdhC Rossmann domain TrkA_N PF02254.18 ORF130204 - 0.039 14.2 0.0 0.077 13.3 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain GIDA PF01134.22 ORF130204 - 0.039 13.0 0.5 0.38 9.8 0.4 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_oxidored PF12831.7 ORF130204 - 0.078 12.3 1.3 4.1 6.6 0.4 2.6 2 1 1 3 3 3 0 FAD dependent oxidoreductase NAD_Gly3P_dh_N PF01210.23 ORF130204 - 0.11 12.4 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 ORF130204 - 0.18 12.4 0.0 0.36 11.4 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 ORF130204 - 0.19 12.0 0.1 0.35 11.1 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF4533 PF15047.6 ORF127356 - 0.011 15.4 1.7 0.011 15.4 1.7 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF4533) Dynactin_p22 PF07426.11 ORF127356 - 0.16 11.8 6.1 0.96 9.3 0.3 3.6 3 1 0 3 3 3 0 Dynactin subunit p22 Wbp11 PF09429.10 ORF127356 - 0.35 11.3 0.0 0.35 11.3 0.0 3.0 3 1 0 3 3 3 0 WW domain binding protein 11 GCN5L1 PF06320.13 ORF127356 - 1.9 8.7 6.2 5.2 7.2 0.1 3.8 3 1 1 4 4 4 0 GCN5-like protein 1 (GCN5L1) Cdh1_DBD_1 PF18196.1 ORF127356 - 4.4 7.6 6.0 6.7 7.1 0.3 3.3 3 0 0 3 3 3 0 Chromodomain helicase DNA-binding domain 1 CdvA PF18822.1 ORF127356 - 4.8 7.0 8.0 3.6 7.4 0.0 3.6 4 0 0 4 4 4 0 CdvA-like coiled-coil domain SKA2 PF16740.5 ORF127356 - 8 6.3 14.0 0.55 10.0 0.7 3.9 4 1 0 4 4 4 0 Spindle and kinetochore-associated protein 2 FAP206 PF12018.8 ORF114972 - 7.1e-57 193.0 0.0 1.2e-56 192.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function WD40 PF00400.32 ORF108050 - 1.5e-69 228.2 17.8 2.5e-10 40.8 0.1 8.1 8 0 0 8 8 8 8 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF108050 - 3.9e-20 72.0 0.4 0.00014 22.1 0.0 7.4 1 1 7 8 8 8 5 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF108050 - 9.6e-10 38.3 3.6 0.14 11.4 0.0 5.2 1 1 2 4 4 4 4 WD40-like domain eIF2A PF08662.11 ORF108050 - 3.6e-09 36.8 4.0 0.0001 22.2 0.1 3.4 1 1 3 4 4 4 4 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 ORF108050 - 2.4e-08 33.3 7.5 0.23 10.4 0.0 5.7 1 1 5 6 6 6 3 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF108050 - 5.4e-07 28.6 4.9 0.21 10.2 0.0 5.5 2 2 4 6 6 6 4 Nucleoporin Nup120/160 CEP19 PF14933.6 ORF108050 - 0.00021 21.6 0.1 0.00031 21.1 0.1 1.2 1 0 0 1 1 1 1 CEP19-like protein WD40_3 PF15911.5 ORF108050 - 0.051 13.6 0.0 29 4.8 0.0 3.2 3 0 0 3 3 3 0 WD domain, G-beta repeat PMI_typeI PF01238.21 ORF102767 - 1.3e-88 297.7 0.9 8.6e-88 295.0 0.9 1.9 1 1 0 1 1 1 1 Phosphomannose isomerase type I Cupin_2 PF07883.11 ORF102767 - 0.011 15.4 0.0 7 6.4 0.0 2.4 2 0 0 2 2 2 0 Cupin domain AraC_binding PF02311.19 ORF102767 - 0.035 14.0 0.0 8.6 6.3 0.0 3.1 3 0 0 3 3 3 0 AraC-like ligand binding domain ATP_bind_3 PF01171.20 ORF101941 - 4.9e-61 205.7 0.0 6.6e-61 205.2 0.0 1.2 1 0 0 1 1 1 1 PP-loop family TilS_C PF11734.8 ORF101941 - 1.4e-26 91.7 0.0 5.2e-26 89.9 0.0 2.0 2 0 0 2 2 2 1 TilS substrate C-terminal domain TilS PF09179.11 ORF101941 - 4.4e-20 71.9 4.2 2.1e-19 69.7 4.2 2.3 1 0 0 1 1 1 1 TilS substrate binding domain tRNA_Me_trans PF03054.16 ORF101941 - 0.00076 18.4 0.0 0.0011 17.9 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase PAPS_reduct PF01507.19 ORF101941 - 0.065 13.3 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family CEP63 PF17045.5 ORF77297 - 0.17 11.8 35.5 0.046 13.6 17.4 2.5 2 1 1 3 3 3 0 Centrosomal protein of 63 kDa DivIC PF04977.15 ORF77297 - 5.5 6.8 36.1 0.22 11.3 4.6 5.2 4 2 1 5 5 5 0 Septum formation initiator PKcGMP_CC PF16808.5 ORF77297 - 10 6.1 14.1 0.75 9.7 4.2 3.8 3 1 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Acyl_transf_3 PF01757.22 ORF73300 - 9.5e-16 57.8 15.7 1.4e-15 57.2 15.7 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF2162 PF09930.9 ORF73300 - 0.047 13.1 0.7 0.11 11.9 0.7 1.6 1 0 0 1 1 1 0 Predicted transporter (DUF2162) 2OG-FeII_Oxy_2 PF13532.6 ORF70028 - 1.3e-16 61.4 0.0 3.3e-16 60.0 0.0 1.6 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily Glyco_transf_8 PF01501.20 ORF70028 - 1.7e-15 57.3 0.0 2.4e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 8 PhoLip_ATPase_C PF16212.5 ORF57352 - 2.5e-70 237.1 30.8 2.9e-70 236.9 30.8 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase_3 PF08282.12 ORF57352 - 0.015 15.1 0.1 0.015 15.1 0.1 2.3 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase DSPc PF00782.20 ORF57352 - 0.089 12.6 0.2 0.24 11.2 0.2 1.7 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain CDC45 PF02724.14 ORF57352 - 0.21 9.8 18.1 0.29 9.4 18.1 1.1 1 0 0 1 1 1 0 CDC45-like protein Hydrolase PF00702.26 ORF57352 - 3.1 8.0 4.8 0.59 10.4 0.1 2.1 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase Mid2 PF04478.12 ORF57137 - 0.18 11.7 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor Urb2 PF10441.9 ORF44631 - 0.073 13.0 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Urb2/Npa2 family DUF2175 PF09943.9 ORF44631 - 0.47 10.8 3.7 0.8 10.0 0.4 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) SNARE_assoc PF09335.11 ORF44099 - 2.9e-19 69.7 8.2 2.9e-19 69.7 8.2 2.2 2 1 0 2 2 2 1 SNARE associated Golgi protein m04gp34like PF12216.8 ORF44099 - 0.014 15.0 0.2 4.4 6.8 0.1 2.4 2 0 0 2 2 2 0 Immune evasion protein Bac_small_YrzI PF09501.10 ORF44099 - 0.17 12.0 5.6 0.31 11.2 1.0 2.9 2 0 0 2 2 2 0 Probable sporulation protein (Bac_small_yrzI) Ammonium_transp PF00909.21 ORF38451 - 1.1e-44 152.7 8.7 6.5e-42 143.6 6.8 2.2 2 0 0 2 2 2 2 Ammonium Transporter Family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks30.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks30.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks30.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks30.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:21:31 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1854 PF08909.11 ORF150172 - 0.06 13.2 0.2 0.071 12.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1854) MOLO1 PF17175.4 ORF150172 - 0.28 11.3 3.7 0.68 10.1 1.8 1.9 1 1 1 2 2 2 0 Modulator of levamisole receptor-1 Coagulin PF02035.15 ORF149380 - 0.053 13.4 1.9 0.1 12.5 0.9 1.7 1 1 1 2 2 2 0 Coagulin DUF5389 PF17364.2 ORF148522 - 0.016 15.3 0.3 0.019 15.0 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5389) Hydrolase_4 PF12146.8 ORF147193 - 7.3e-08 32.0 0.1 8.9e-08 31.7 0.1 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF147193 - 1.1e-06 28.5 0.0 1.3e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 ORF147193 - 0.0001 22.0 0.1 0.00011 21.9 0.1 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF147193 - 0.0013 18.3 0.1 0.0014 18.1 0.1 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family PhoPQ_related PF10142.9 ORF147193 - 0.0056 15.4 0.0 0.0056 15.4 0.0 1.0 1 0 0 1 1 1 1 PhoPQ-activated pathogenicity-related protein Abhydrolase_2 PF02230.16 ORF147193 - 0.0062 16.4 0.1 0.0076 16.1 0.1 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 ORF147193 - 0.023 14.8 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 TAP-like protein FSH1 PF03959.13 ORF147193 - 0.03 14.0 0.1 0.033 13.8 0.1 1.1 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Peptidase_S15 PF02129.18 ORF147193 - 0.15 11.6 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Ac81 PF05820.11 ORF146992 - 0.14 11.7 2.1 0.17 11.5 2.1 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 RDD PF06271.12 ORF146730 - 0.01 16.1 0.3 0.011 15.9 0.3 1.1 1 0 0 1 1 1 0 RDD family DUF1182 PF06681.13 ORF146228 - 0.043 13.4 0.1 0.046 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1182) DUF2256 PF10013.9 ORF146081 - 0.05 13.7 0.5 0.05 13.7 0.5 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) Zf_RING PF16744.5 ORF146081 - 0.054 13.6 0.4 0.07 13.2 0.0 1.5 2 0 0 2 2 2 0 KIAA1045 RING finger Dynein_light PF01221.18 ORF145808 - 8.2e-26 90.2 2.1 8.9e-26 90.0 2.1 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 QIL1 PF15884.5 ORF145808 - 0.009 16.6 0.1 0.013 16.1 0.1 1.2 1 0 0 1 1 1 1 MICOS complex subunit MIC13, QIL1 DUF5314 PF17241.2 ORF145808 - 0.035 13.8 0.6 0.04 13.6 0.6 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5314) Rif1_N PF12231.8 ORF145808 - 0.062 12.3 0.1 0.062 12.3 0.1 1.0 1 0 0 1 1 1 0 Rap1-interacting factor 1 N terminal TcpF PF06340.11 ORF145005 - 0.022 13.7 0.3 0.028 13.3 0.3 1.1 1 0 0 1 1 1 0 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F EF-hand_1 PF00036.32 ORF144899 - 1.2e-12 46.4 1.6 3.1e-07 29.5 0.9 2.3 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 ORF144899 - 2.2e-11 42.7 1.6 4.4e-06 26.0 1.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF144899 - 2.9e-10 40.4 0.1 3.5e-10 40.2 0.1 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF144899 - 1.4e-09 37.1 1.5 0.00017 21.3 0.6 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF144899 - 1.4e-08 34.4 0.3 4.2e-06 26.5 0.1 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF144899 - 0.0071 16.2 0.7 1.6 8.7 0.1 2.2 2 0 0 2 2 2 2 EF hand EF-hand_9 PF14658.6 ORF144899 - 0.048 14.0 0.0 0.061 13.7 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain PGC7_Stella PF15549.6 ORF144556 - 0.097 12.7 2.3 0.12 12.3 2.3 1.2 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain SWIRM PF04433.17 ORF144498 - 0.02 15.2 1.4 0.024 15.0 1.4 1.2 1 0 0 1 1 1 0 SWIRM domain Citrate_synt PF00285.21 ORF144252 - 8.2e-25 87.6 0.1 9e-25 87.5 0.1 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain RNA_pol_Rpb1_2 PF00623.20 ORF144252 - 0.099 12.9 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 2 Amidase PF01425.21 ORF144067 - 1.8e-05 23.9 0.0 2.1e-05 23.7 0.0 1.0 1 0 0 1 1 1 1 Amidase DUF4520 PF15016.6 ORF143952 - 0.021 14.9 0.1 0.035 14.2 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4520) Phage_Gp23 PF10669.9 ORF143934 - 1.5 9.2 3.3 0.5 10.7 0.8 1.5 2 0 0 2 2 2 0 Protein gp23 (Bacteriophage A118) GRIN_C PF15235.6 ORF142436 - 0.14 12.4 3.2 0.16 12.2 3.2 1.2 1 0 0 1 1 1 0 G protein-regulated inducer of neurite outgrowth C-terminus DUF4396 PF14342.6 ORF142311 - 0.078 13.3 3.0 0.23 11.8 3.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4396) RWD PF05773.22 ORF142290 - 0.082 13.2 0.0 0.082 13.2 0.0 1.1 1 0 0 1 1 1 0 RWD domain Sec8_exocyst PF04048.14 ORF142273 - 0.036 14.0 0.3 6 6.8 0.0 2.0 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain PYRIN PF02758.16 ORF142273 - 0.057 13.6 0.0 0.077 13.2 0.0 1.1 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain DUF2370 PF10176.9 ORF142115 - 0.026 14.2 1.3 0.028 14.1 0.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) ALMT PF11744.8 ORF142115 - 0.33 9.7 1.0 0.32 9.8 1.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter zf-CDGSH PF09360.10 ORF141506 - 0.15 12.3 0.4 0.15 12.3 0.4 1.9 2 0 0 2 2 2 0 Iron-binding zinc finger CDGSH type MqsA_antitoxin PF15731.5 ORF141419 - 4.1e-36 124.0 0.1 4.4e-36 123.9 0.1 1.0 1 0 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_3 PF01381.22 ORF141419 - 0.00032 20.7 0.0 0.00047 20.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 ORF141419 - 0.0066 16.8 0.0 0.0081 16.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Tn916-Xis PF09035.10 ORF141419 - 0.039 14.2 0.0 0.055 13.7 0.0 1.2 1 0 0 1 1 1 0 Excisionase from transposon Tn916 NRDE-2 PF08424.10 ORF141002 - 0.15 11.2 0.7 0.16 11.0 0.7 1.0 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference NADH_u_ox_C PF12853.7 ORF14036 - 0.2 11.7 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit Ribosomal_S17 PF00366.20 ORF140315 - 5.1e-08 32.9 0.0 6.2e-08 32.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S17 DUF1661 PF07877.11 ORF140238 - 0.021 14.5 0.1 0.039 13.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1661) DUF5642 PF18702.1 ORF140238 - 0.079 12.7 0.1 0.079 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5642) TPR_12 PF13424.6 ORF140238 - 0.14 12.5 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat IL8 PF00048.20 ORF140165 - 0.074 13.2 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Small cytokines (intecrine/chemokine), interleukin-8 like PMSI1 PF15322.6 ORF139837 - 6 6.2 7.0 6.9 6.0 7.0 1.0 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative eIF-5a PF01287.20 ORF138467 - 0.012 15.7 1.0 0.017 15.2 1.0 1.2 1 0 0 1 1 1 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold ATP-cone PF03477.16 ORF138347 - 0.013 16.1 2.6 0.085 13.4 0.5 2.5 2 1 0 2 2 2 0 ATP cone domain Trns_repr_metal PF02583.17 ORF137523 - 0.037 14.4 0.2 0.042 14.2 0.2 1.2 1 0 0 1 1 1 0 Metal-sensitive transcriptional repressor zf-RING_2 PF13639.6 ORF137460 - 2.5e-15 56.5 8.4 3.2e-15 56.2 8.4 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF137460 - 3.3e-11 43.3 13.2 4.1e-10 39.8 13.2 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF137460 - 7.2e-11 41.8 8.2 1e-10 41.3 8.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF137460 - 3.8e-10 39.3 6.7 3.8e-10 39.3 6.7 1.5 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF137460 - 3.1e-09 36.6 5.2 4.1e-09 36.2 5.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF137460 - 5.2e-09 35.9 8.2 7.3e-09 35.4 8.2 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF137460 - 1.7e-08 34.2 8.0 2.6e-08 33.6 8.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF137460 - 2.2e-07 30.6 8.2 1.5e-06 28.0 9.0 1.8 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF137460 - 4.4e-07 29.9 7.7 2e-06 27.7 7.7 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF137460 - 4.7e-07 29.7 3.5 4.7e-07 29.7 3.5 1.6 1 1 1 2 2 2 1 RING-type zinc-finger Vps39_2 PF10367.9 ORF137460 - 1.1e-05 25.8 2.4 4.8e-05 23.8 0.4 2.0 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 Zn_ribbon_17 PF17120.5 ORF137460 - 2.7e-05 23.7 5.6 3.7e-05 23.3 5.6 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF137460 - 0.00013 22.0 6.3 0.0011 19.1 6.3 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain TerY_C PF15616.6 ORF137460 - 0.00066 19.8 1.7 0.00072 19.7 1.7 1.1 1 0 0 1 1 1 1 TerY-C metal binding domain zf-HC5HC2H_2 PF13832.6 ORF137460 - 0.0018 18.4 1.4 0.0018 18.4 1.4 1.7 1 1 1 2 2 2 1 PHD-zinc-finger like domain zf-RING-like PF08746.11 ORF137460 - 0.0036 17.6 7.2 0.0051 17.1 7.2 1.2 1 0 0 1 1 1 1 RING-like domain Prok-RING_1 PF14446.6 ORF137460 - 0.004 17.1 5.5 0.047 13.6 1.3 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-Nse PF11789.8 ORF137460 - 0.0058 16.4 2.9 0.0091 15.8 2.9 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit RINGv PF12906.7 ORF137460 - 0.0062 16.6 6.0 0.017 15.2 6.0 1.7 1 1 0 1 1 1 1 RING-variant domain zf-C3HC4_4 PF15227.6 ORF137460 - 0.01 16.0 5.0 0.025 14.7 5.0 1.7 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Rtf2 PF04641.12 ORF137460 - 0.014 14.8 1.5 0.021 14.2 1.5 1.4 1 1 0 1 1 1 0 Rtf2 RING-finger zf-RING_4 PF14570.6 ORF137460 - 0.017 14.9 6.5 0.071 12.9 6.3 1.9 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-HC5HC2H PF13771.6 ORF137460 - 0.025 14.8 1.5 0.025 14.8 1.5 2.0 1 1 1 2 2 2 0 PHD-like zinc-binding domain Baculo_RING PF05883.11 ORF137460 - 0.028 14.4 0.3 0.035 14.1 0.3 1.2 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain DUF2175 PF09943.9 ORF137460 - 0.034 14.4 2.2 0.034 14.4 2.2 1.8 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) PHD PF00628.29 ORF137460 - 0.036 14.0 6.1 0.063 13.2 6.1 1.4 1 0 0 1 1 1 0 PHD-finger UPF0547 PF10571.9 ORF137460 - 0.062 13.4 3.9 1.6 8.9 0.1 2.7 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 Kazal_1 PF00050.21 ORF137460 - 0.22 11.6 5.4 0.5 10.4 0.4 2.2 1 1 1 2 2 2 0 Kazal-type serine protease inhibitor domain zf-P11 PF03854.14 ORF137460 - 0.69 9.6 7.1 11 5.7 7.4 2.0 1 1 1 2 2 2 0 P-11 zinc finger zf-C3H2C3 PF17122.5 ORF137460 - 1.7 8.7 9.2 5 7.2 9.2 1.9 1 1 0 1 1 1 0 Zinc-finger DUF836 PF05768.14 ORF136758 - 0.067 13.6 0.6 1.7 9.1 0.1 2.1 2 0 0 2 2 2 0 Glutaredoxin-like domain (DUF836) Adeno_IVa2 PF02456.15 ORF136758 - 0.07 11.9 1.2 0.069 11.9 1.2 1.0 1 0 0 1 1 1 0 Adenovirus IVa2 protein DUF1854 PF08909.11 ORF136704 - 0.06 13.2 0.2 0.071 12.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1854) MOLO1 PF17175.4 ORF136704 - 0.28 11.3 3.7 0.68 10.1 1.8 1.9 1 1 1 2 2 2 0 Modulator of levamisole receptor-1 DUF2370 PF10176.9 ORF136316 - 5.6 6.6 6.3 3 7.4 4.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2370) Ebola_NP PF05505.12 ORF135071 - 0.11 10.8 0.0 0.14 10.5 0.0 1.0 1 0 0 1 1 1 0 Ebola nucleoprotein PGC7_Stella PF15549.6 ORF134731 - 0.097 12.7 2.3 0.12 12.3 2.3 1.2 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain CD52 PF15116.6 ORF134284 - 0.15 12.1 0.6 0.23 11.5 0.6 1.4 1 0 0 1 1 1 0 CAMPATH-1 antigen Gallidermin PF02052.15 ORF133423 - 0.079 13.3 0.3 0.13 12.6 0.3 1.4 1 0 0 1 1 1 0 Gallidermin WD40 PF00400.32 ORF132414 - 2.1e-06 28.3 0.0 0.02 15.7 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat Frtz PF11768.8 ORF132414 - 0.12 10.7 0.0 0.12 10.6 0.0 1.0 1 0 0 1 1 1 0 WD repeat-containing and planar cell polarity effector protein Fritz Pkinase PF00069.25 ORF132291 - 1.8e-27 96.4 0.3 1.9e-27 96.3 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF132291 - 4.4e-19 68.8 0.0 4.6e-19 68.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF132291 - 6.9e-05 22.0 0.1 8.1e-05 21.7 0.1 1.0 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF132291 - 0.00013 21.6 0.0 0.00016 21.4 0.0 1.0 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 ORF132291 - 0.00024 21.1 0.1 0.00058 19.9 0.1 1.5 1 1 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF132291 - 0.0031 16.9 0.0 0.0035 16.7 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF132291 - 0.024 14.2 0.1 0.026 14.1 0.1 1.2 1 1 0 1 1 1 0 Choline/ethanolamine kinase Kinase-like PF14531.6 ORF132291 - 0.094 12.0 0.0 0.098 12.0 0.0 1.1 1 0 0 1 1 1 0 Kinase-like FTA2 PF13095.6 ORF132291 - 0.16 11.6 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 CTX_RstB PF07459.11 ORF132270 - 0.063 13.5 0.2 0.18 12.1 0.1 1.7 2 0 0 2 2 2 0 CTX phage RstB protein RAP1 PF07218.11 ORF132270 - 4.4 5.5 4.3 4.6 5.4 4.3 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) GvpG PF05120.12 ORF131496 - 0.14 12.2 0.5 0.2 11.7 0.5 1.1 1 0 0 1 1 1 0 Gas vesicle protein G MCM_bind PF09739.9 ORF130900 - 0.066 11.7 0.0 0.071 11.6 0.0 1.0 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor DUF349 PF03993.12 ORF130846 - 0.0016 18.7 1.0 0.002 18.4 1.0 1.1 1 0 0 1 1 1 1 Domain of Unknown Function (DUF349) DUF4141 PF13605.6 ORF130846 - 0.018 14.3 1.2 0.025 13.8 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4141) FapA PF03961.13 ORF130846 - 0.32 9.6 3.8 0.33 9.5 3.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A CRCB PF02537.15 ORF130814 - 0.0086 16.4 4.0 0.01 16.2 4.0 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) Orthoreo_P10 PF07204.11 ORF130814 - 0.01 15.8 1.8 0.019 14.9 1.8 1.5 1 1 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 Ribosomal_L40e PF01020.17 ORF130483 - 0.018 14.9 1.5 0.018 14.9 1.5 1.6 2 0 0 2 2 2 0 Ribosomal L40e family Prot_inhib_II PF02428.15 ORF12925 - 0.064 13.7 0.2 0.064 13.7 0.2 1.6 2 0 0 2 2 2 0 Potato type II proteinase inhibitor family GST_C PF00043.25 ORF129067 - 8.8e-11 41.9 0.1 1.1e-10 41.5 0.1 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF129067 - 1.6e-09 37.8 0.1 2e-09 37.5 0.1 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF129067 - 1.4e-07 31.4 0.1 5.7e-07 29.5 0.1 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain CENP-O PF09496.10 ORF128323 - 0.1 12.6 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component DUF4703 PF15775.5 ORF127798 - 0.17 11.7 1.1 0.2 11.4 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4703) OTOS PF15182.6 ORF127263 - 0.049 13.6 0.2 0.13 12.2 0.1 1.7 1 1 1 2 2 2 0 Otospiralin FxsA PF04186.13 ORF127118 - 4.2e-11 42.9 3.1 5.1e-11 42.6 3.1 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein DUF3446 PF11928.8 ORF126955 - 0.5 10.7 14.6 0.63 10.4 14.6 1.2 1 0 0 1 1 1 0 Early growth response N-terminal domain PGC7_Stella PF15549.6 ORF126745 - 0.097 12.7 2.3 0.12 12.3 2.3 1.2 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain Tmemb_55A PF09788.9 ORF126444 - 0.028 13.5 3.0 0.031 13.4 3.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 55A Alpha_adaptin_C PF02296.16 ORF12605 - 0.041 14.1 0.0 0.05 13.8 0.0 1.1 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain BolA PF01722.18 ORF1255 - 1.2e-13 51.1 0.0 1.5e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 BolA-like protein Annexin_like PF18411.1 ORF1255 - 0.12 12.6 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Annexin-like domain DUF2623 PF11115.8 ORF125381 - 0.016 15.3 0.0 0.025 14.7 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2623) Glyco_hydro_36 PF17167.4 ORF125362 - 0.055 12.2 0.0 0.062 12.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase 36 superfamily, catalytic domain PRD_Mga PF08270.11 ORF124970 - 0.0022 17.7 0.2 0.0022 17.7 0.2 1.1 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) PRD domain Herpes_UL20 PF04544.12 ORF124961 - 0.025 15.0 0.5 0.027 14.8 0.5 1.1 1 0 0 1 1 1 0 Herpesvirus egress protein UL20 KH_6 PF15985.5 ORF124178 - 0.15 12.4 0.0 0.26 11.7 0.0 1.4 1 0 0 1 1 1 0 KH domain DUF2690 PF10901.8 ORF123665 - 0.014 15.7 0.2 0.019 15.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2690) Rsm1 PF08600.10 ORF123214 - 0.046 13.9 0.3 0.078 13.1 0.3 1.4 1 0 0 1 1 1 0 Rsm1-like TMEM192 PF14802.6 ORF122973 - 0.15 11.2 5.7 0.18 10.9 5.7 1.0 1 0 0 1 1 1 0 TMEM192 family DASH_Dam1 PF08653.10 ORF122512 - 0.14 11.9 2.9 0.24 11.3 2.9 1.5 1 0 0 1 1 1 0 DASH complex subunit Dam1 UCR_hinge PF02320.16 ORF122183 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein TA0956 PF11513.8 ORF121881 - 0.22 11.7 0.3 0.36 11.1 0.2 1.5 1 1 1 2 2 2 0 Thermoplasma acidophilum protein TA0956 DUF3987 PF13148.6 ORF121205 - 0.0081 15.2 0.0 0.0092 15.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3987) TMEM52 PF14979.6 ORF121126 - 1.7 8.6 9.2 2 8.3 9.2 1.2 1 0 0 1 1 1 0 Transmembrane 52 UCR_hinge PF02320.16 ORF121096 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein Glyco_hydro_36 PF17167.4 ORF119161 - 0.055 12.2 0.0 0.062 12.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase 36 superfamily, catalytic domain DUF2873 PF11395.8 ORF11706 - 0.012 15.4 8.1 0.021 14.7 8.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2873) Shikimate_dh_N PF08501.11 ORF117049 - 0.017 15.4 0.0 0.023 14.9 0.0 1.2 1 0 0 1 1 1 0 Shikimate dehydrogenase substrate binding domain SRP_TPR_like PF17004.5 ORF117049 - 0.025 14.6 0.4 0.029 14.4 0.4 1.1 1 0 0 1 1 1 0 Putative TPR-like repeat HOOK PF05622.12 ORF116939 - 0.00033 19.0 0.3 0.00033 19.0 0.3 1.0 1 0 0 1 1 1 1 HOOK protein Clr5 PF14420.6 ORF116939 - 0.083 13.1 0.7 0.13 12.5 0.7 1.3 1 0 0 1 1 1 0 Clr5 domain NosD PF05048.13 ORF116899 - 7.9e-05 22.0 0.3 8.1e-05 22.0 0.3 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 ORF116899 - 0.01 15.7 0.1 0.012 15.5 0.1 1.1 1 0 0 1 1 1 0 Right handed beta helix region IL8 PF00048.20 ORF116527 - 0.074 13.2 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Small cytokines (intecrine/chemokine), interleukin-8 like Peptidase_S11 PF00768.20 ORF116187 - 1.1e-05 25.0 0.0 1.4e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase KAR PF15222.6 ORF116187 - 0.13 12.6 2.5 0.27 11.5 0.2 1.9 1 1 1 2 2 2 0 Kidney androgen-regulated Ycf70 PF17382.2 ORF115780 - 0.085 13.3 8.3 0.13 12.7 1.3 2.1 1 1 1 2 2 2 0 Uncharacterized Ycf70-like PDR_assoc PF08370.11 ORF115780 - 2.8 7.7 7.1 0.27 11.0 0.8 2.0 1 1 1 2 2 2 0 Plant PDR ABC transporter associated DUF1182 PF06681.13 ORF115655 - 0.04 13.5 0.1 0.043 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1182) YcgR PF07317.12 ORF115559 - 0.05 13.5 0.0 0.065 13.1 0.0 1.1 1 0 0 1 1 1 0 Flagellar regulator YcgR CD52 PF15116.6 ORF115299 - 0.15 12.1 0.6 0.23 11.5 0.6 1.4 1 0 0 1 1 1 0 CAMPATH-1 antigen DUF2764 PF10962.8 ORF115107 - 0.033 13.7 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2764) DinB PF05163.12 ORF115026 - 0.015 15.2 0.1 0.023 14.6 0.1 1.3 1 0 0 1 1 1 0 DinB family PTR2 PF00854.21 ORF115015 - 9.7e-05 21.4 1.0 0.0001 21.3 0.0 1.5 2 0 0 2 2 2 1 POT family Cytochrom_B_C PF00032.17 ORF115015 - 0.13 12.6 3.1 0.23 11.8 3.0 1.7 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD Slx4 PF09494.10 ORF11475 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Slx4 endonuclease Tn7_Tnp_TnsA_C PF08721.11 ORF1147 - 0.018 15.7 0.4 0.025 15.2 0.4 1.2 1 0 0 1 1 1 0 TnsA endonuclease C terminal PGC7_Stella PF15549.6 ORF113516 - 0.097 12.7 2.3 0.12 12.3 2.3 1.2 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain YMF19 PF02326.15 ORF113293 - 0.25 12.2 3.8 0.25 12.1 3.2 1.4 1 1 0 1 1 1 0 Plant ATP synthase F0 Band_7 PF01145.25 ORF113114 - 1.1e-13 51.6 0.0 1.1e-13 51.5 0.0 1.0 1 0 0 1 1 1 1 SPFH domain / Band 7 family Tn7_Tnp_TnsA_C PF08721.11 ORF112954 - 0.018 15.7 0.4 0.025 15.2 0.4 1.2 1 0 0 1 1 1 0 TnsA endonuclease C terminal ADH_N PF08240.12 ORF112578 - 0.72 9.8 3.9 0.52 10.2 2.3 1.6 1 1 1 2 2 2 0 Alcohol dehydrogenase GroES-like domain DUF1768 PF08719.11 ORF112400 - 0.062 13.5 1.0 0.066 13.4 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1768) RWD PF05773.22 ORF111684 - 0.013 15.8 0.5 0.013 15.8 0.5 1.1 1 0 0 1 1 1 0 RWD domain UPF0193 PF05250.11 ORF111411 - 0.0069 16.2 2.2 0.0077 16.1 2.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0193) DnaJ PF00226.31 ORF111122 - 0.19 11.9 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 DnaJ domain Granulin PF00396.18 ORF110881 - 0.23 11.8 5.3 0.91 9.9 0.1 2.3 2 0 0 2 2 2 0 Granulin AUX_IAA PF02309.16 ORF110778 - 0.068 13.0 0.1 0.084 12.7 0.1 1.1 1 0 0 1 1 1 0 AUX/IAA family DUF465 PF04325.13 ORF110739 - 0.018 15.1 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF465) BBS2_N PF14781.6 ORF110739 - 0.12 12.2 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal UQ_con PF00179.26 ORF110206 - 6.3e-27 93.9 0.0 6.9e-27 93.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF1218 PF06749.12 ORF109822 - 0.0021 18.6 0.1 0.0025 18.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1218) Ribosomal_L5 PF00281.19 ORF109582 - 0.0039 17.5 1.0 0.0075 16.6 1.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 DUF465 PF04325.13 ORF10931 - 0.018 15.1 0.0 0.028 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF465) BBS2_N PF14781.6 ORF10931 - 0.12 12.2 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal DUF5090 PF17009.5 ORF109240 - 1.1 9.2 9.9 1.6 8.7 9.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5090) FOP_dimer PF09398.10 ORF109059 - 0.017 15.4 0.0 0.02 15.2 0.0 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain ArsA_ATPase PF02374.15 ORF10733 - 7.2e-29 100.9 0.1 8.4e-29 100.7 0.1 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.6 ORF10733 - 6.8e-09 35.9 0.0 8.4e-09 35.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 ORF10733 - 2.6e-07 30.7 0.0 2.8e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 ORF10733 - 5.3e-05 22.8 0.0 5.5e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NB-ARC PF00931.22 ORF10733 - 0.0001 21.6 0.0 0.00011 21.5 0.0 1.1 1 0 0 1 1 1 1 NB-ARC domain CBP_BcsQ PF06564.12 ORF10733 - 0.00019 21.0 0.0 0.00023 20.7 0.0 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Zeta_toxin PF06414.12 ORF10733 - 0.00072 18.9 0.0 0.00077 18.8 0.0 1.1 1 0 0 1 1 1 1 Zeta toxin ParA PF10609.9 ORF10733 - 0.00096 18.7 0.2 0.0013 18.3 0.2 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase SRP54 PF00448.22 ORF10733 - 0.0032 17.1 0.0 0.0038 16.9 0.0 1.1 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain PhoH PF02562.16 ORF10733 - 0.013 15.0 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 PhoH-like protein AAA_18 PF13238.6 ORF10733 - 0.02 15.4 0.0 0.025 15.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF10733 - 0.057 13.1 0.1 0.071 12.8 0.1 1.1 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF10733 - 0.075 12.0 0.0 0.085 11.8 0.0 1.0 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 ORF10733 - 0.11 12.2 0.2 0.15 11.8 0.2 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein CTP_synth_N PF06418.14 ORF10733 - 0.12 11.7 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 CTP synthase N-terminus AAA_25 PF13481.6 ORF10733 - 0.12 12.0 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 ORF10733 - 0.18 10.9 0.0 0.22 10.7 0.0 1.1 1 0 0 1 1 1 0 PIF1-like helicase Nuf2 PF03800.14 ORF106805 - 0.0025 17.9 0.5 0.0028 17.8 0.5 1.1 1 0 0 1 1 1 1 Nuf2 family Zn_Tnp_IS91 PF14319.6 ORF105820 - 0.015 15.3 0.8 0.021 14.9 0.8 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain MAF_flag10 PF01973.18 ORF105670 - 0.0073 16.0 0.0 0.0096 15.6 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function DUF115 Mso1_C PF14477.6 ORF105404 - 0.1 13.0 0.2 0.17 12.3 0.2 1.3 1 0 0 1 1 1 0 Membrane-polarising domain of Mso1 Rsc14 PF08586.10 ORF104959 - 0.047 14.5 2.2 0.057 14.2 2.2 1.3 1 1 0 1 1 1 0 RSC complex, Rsc14/Ldb7 subunit DUF295 PF03478.18 ORF104639 - 0.03 13.9 2.6 0.094 12.3 0.3 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF295) PTPS PF01242.19 ORF103947 - 2.5e-20 72.7 0.0 2.7e-20 72.5 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Mannosyl_trans4 PF15971.5 ORF102919 - 0.057 13.3 0.2 0.06 13.2 0.2 1.0 1 0 0 1 1 1 0 DolP-mannose mannosyltransferase Nab2p_Zf1 PF18260.1 ORF102776 - 0.45 10.5 7.9 4.5 7.3 0.2 2.5 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 PET117 PF15786.5 ORF102694 - 4.9e-15 55.5 1.0 7e-15 55.1 1.0 1.1 1 0 0 1 1 1 1 PET assembly of cytochrome c oxidase, mitochondrial DUF2681 PF10883.8 ORF102694 - 0.0069 16.8 2.2 0.0092 16.4 2.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2681) Roughex PF06020.11 ORF102694 - 0.058 12.5 1.8 0.056 12.5 1.8 1.1 1 0 0 1 1 1 0 Drosophila roughex protein UCR_hinge PF02320.16 ORF101305 - 0.017 15.3 2.7 0.071 13.3 1.8 2.0 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein PBP_sp32 PF07222.12 ORF101289 - 0.19 11.2 0.1 0.23 10.9 0.1 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Adeno_IVa2 PF02456.15 ORF101207 - 0.029 13.2 1.5 0.032 13.0 1.5 1.0 1 0 0 1 1 1 0 Adenovirus IVa2 protein DUF2589 PF11655.8 ORF101207 - 0.19 12.1 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2589) EIN3 PF04873.13 ORF100644 - 0.084 12.2 0.4 0.083 12.2 0.4 1.1 1 0 0 1 1 1 0 Ethylene insensitive 3 TMEM173 PF15009.6 ORF100373 - 0.25 10.5 1.9 0.27 10.3 1.9 1.0 1 0 0 1 1 1 0 Transmembrane protein 173 FAM222A PF15258.6 NODE_63356_length_256_cov_0.959276_g55415_i0forward_frame_1 - 0.027 13.6 0.1 0.031 13.4 0.1 1.0 1 0 0 1 1 1 0 Protein family of FAM222A DUF3781 PF12636.7 NODE_63355_length_256_cov_0.995475_g55414_i0reverse_frame_1 - 0.014 15.2 1.9 0.022 14.6 1.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3781) DcpS_C PF11969.8 NODE_63353_length_256_cov_1.067873_g55412_i0reverse_frame_1 - 0.027 14.9 1.4 0.036 14.6 1.4 1.2 1 0 0 1 1 1 0 Scavenger mRNA decapping enzyme C-term binding Tmemb_9 PF05434.11 NODE_63350_length_256_cov_1.081448_g55409_i0reverse_frame_1 - 0.28 11.1 0.2 0.28 11.1 0.2 1.5 2 0 0 2 2 2 0 TMEM9 DUF4199 PF13858.6 NODE_63346_length_256_cov_1.085973_g55405_i0forward_frame_1 - 0.021 15.2 4.9 0.032 14.6 4.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) PhoLip_ATPase_C PF16212.5 NODE_63346_length_256_cov_1.085973_g55405_i0forward_frame_1 - 0.05 13.4 4.8 0.054 13.2 4.8 1.0 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal Spo7 PF03907.13 NODE_63346_length_256_cov_1.085973_g55405_i0forward_frame_1 - 0.12 11.8 0.5 0.14 11.6 0.5 1.1 1 0 0 1 1 1 0 Spo7-like protein DUF5373 PF17343.2 NODE_63346_length_256_cov_1.085973_g55405_i0forward_frame_1 - 0.21 11.4 3.2 0.22 11.4 3.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5373) Lipoxygenase PF00305.19 NODE_63336_length_256_cov_1.285068_g55395_i0forward_frame_1 - 0.12 10.8 0.1 0.13 10.7 0.1 1.0 1 0 0 1 1 1 0 Lipoxygenase EbsA PF17255.2 NODE_63334_length_256_cov_1.298643_g55393_i0reverse_frame_1 - 0.012 16.0 0.2 0.013 15.9 0.2 1.1 1 0 0 1 1 1 0 EbsA-like protein Syntaxin_2 PF14523.6 NODE_63334_length_256_cov_1.298643_g55393_i0reverse_frame_1 - 0.018 15.4 0.8 0.021 15.2 0.8 1.1 1 0 0 1 1 1 0 Syntaxin-like protein Streptin-Immun PF11083.8 NODE_63334_length_256_cov_1.298643_g55393_i0reverse_frame_1 - 0.036 14.5 1.7 0.046 14.1 1.7 1.1 1 0 0 1 1 1 0 Lantibiotic streptin immunity protein SWIRM-assoc_2 PF16496.5 NODE_63329_length_256_cov_1.375566_g55388_i0reverse_frame_1 - 1.1 8.0 4.0 1.2 7.9 4.0 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal Shigella_OspC PF06128.11 NODE_63328_length_256_cov_1.380090_g55387_i0reverse_frame_1 - 0.01 15.6 0.5 0.012 15.4 0.5 1.1 1 0 0 1 1 1 0 Shigella flexneri OspC protein Pox_P4A PF03395.14 NODE_63320_length_256_cov_1.457014_g55379_i0reverse_frame_1 - 0.2 9.2 0.0 0.23 9.0 0.0 1.0 1 0 0 1 1 1 0 Poxvirus P4A protein DUF2606 PF10794.9 NODE_63316_length_256_cov_1.538462_g55375_i0reverse_frame_1 - 0.24 11.2 0.5 0.28 10.9 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) Myc_target_1 PF15179.6 NODE_63309_length_256_cov_1.628959_g55368_i0reverse_frame_1 - 0.0081 16.1 0.1 0.0096 15.8 0.1 1.1 1 0 0 1 1 1 1 Myc target protein 1 Oxidored_q4 PF00507.19 NODE_63309_length_256_cov_1.628959_g55368_i0reverse_frame_1 - 0.012 15.8 0.1 0.012 15.8 0.1 1.1 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 zf-CGNR PF11706.8 NODE_63297_length_256_cov_1.977376_g55356_i0reverse_frame_1 - 0.058 13.3 2.2 5 7.1 0.5 2.5 2 1 0 2 2 2 0 CGNR zinc finger zf-nanos PF05741.13 NODE_63297_length_256_cov_1.977376_g55356_i0reverse_frame_1 - 0.082 13.2 0.2 11 6.3 0.2 2.6 2 1 0 2 2 2 0 Nanos RNA binding domain DUF1317 PF07026.11 NODE_63297_length_256_cov_1.977376_g55356_i0forward_frame_1 - 0.051 13.4 0.0 9.8 6.1 0.0 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1317) DNA_ligase_ZBD PF03119.16 NODE_63293_length_256_cov_2.113122_g55352_i0forward_frame_1 - 0.082 12.9 1.4 10 6.3 0.2 2.9 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain NinF PF05810.12 NODE_63289_length_256_cov_2.180995_g55348_i0forward_frame_1 - 0.18 11.7 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 NinF protein C1_1 PF00130.22 NODE_63287_length_256_cov_2.217195_g55346_i0forward_frame_1 - 0.59 10.1 6.5 0.59 10.1 0.5 2.2 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF898 PF05987.13 NODE_63284_length_256_cov_2.262443_g55343_i0reverse_frame_1 - 7.1e-17 61.5 0.4 7.1e-17 61.5 0.4 1.4 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF898) Lambda_Bor PF06291.11 NODE_63284_length_256_cov_2.262443_g55343_i0reverse_frame_1 - 0.0014 18.6 0.9 0.013 15.5 0.4 2.0 2 0 0 2 2 2 1 Bor protein DUF4234 PF14018.6 NODE_63284_length_256_cov_2.262443_g55343_i0reverse_frame_1 - 0.0074 16.4 1.4 0.0074 16.4 1.4 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4234) Metallophos PF00149.28 NODE_63283_length_256_cov_2.271493_g55342_i0forward_frame_1 - 6e-07 30.2 0.1 7.2e-07 29.9 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Birna_VP5 PF03042.14 NODE_63282_length_256_cov_2.285068_g55341_i0reverse_frame_1 - 0.046 13.8 0.3 0.062 13.3 0.3 1.2 1 0 0 1 1 1 0 Birnavirus VP5 protein BssB_TutG PF18512.1 NODE_63281_length_256_cov_2.298643_g55340_i0forward_frame_1 - 0.045 13.6 0.7 0.081 12.8 0.6 1.5 1 1 0 1 1 1 0 Benzylsuccinate synthase beta subunit SlyX PF04102.12 NODE_63280_length_256_cov_2.303167_g55339_i0reverse_frame_1 - 0.00083 19.9 0.6 0.0011 19.5 0.6 1.2 1 0 0 1 1 1 1 SlyX DivIC PF04977.15 NODE_63280_length_256_cov_2.303167_g55339_i0reverse_frame_1 - 0.007 16.1 0.4 0.0094 15.7 0.4 1.2 1 0 0 1 1 1 1 Septum formation initiator DUF1481 PF07356.12 NODE_63279_length_256_cov_2.339367_g55338_i0reverse_frame_1 - 0.078 12.7 0.0 0.092 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1481) Drc1-Sld2 PF11719.8 NODE_63271_length_256_cov_2.506787_g55330_i0forward_frame_1 - 5.3 6.5 5.3 5.7 6.4 5.3 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein OapA_N PF08525.11 NODE_63270_length_256_cov_2.579186_g55329_i0forward_frame_1 - 4.1 7.5 7.8 12 6.0 2.3 2.2 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif DUF5379 PF17350.2 NODE_63266_length_256_cov_2.846154_g55325_i0forward_frame_1 - 0.037 14.3 0.9 0.049 13.9 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5379) FTP PF07504.13 NODE_63264_length_256_cov_2.868778_g55323_i0reverse_frame_1 - 0.082 12.8 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Fungalysin/Thermolysin Propeptide Motif Pkinase PF00069.25 NODE_63264_length_256_cov_2.868778_g55323_i0forward_frame_1 - 1.3e-08 34.6 0.0 1.3e-08 34.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_63264_length_256_cov_2.868778_g55323_i0forward_frame_1 - 0.0029 16.9 0.0 0.0031 16.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase GCHY-1 PF02649.14 NODE_63261_length_256_cov_3.122172_g55320_i0reverse_frame_1 - 0.1 12.1 0.4 0.11 12.0 0.4 1.0 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 DBD_Tnp_Mut PF03108.15 NODE_63257_length_256_cov_3.352941_g55316_i0reverse_frame_1 - 0.16 12.0 3.1 0.22 11.6 3.1 1.3 1 0 0 1 1 1 0 MuDR family transposase Mqo PF06039.15 NODE_63256_length_256_cov_3.542986_g55315_i0forward_frame_1 - 2.4e-29 102.2 0.1 2.6e-29 102.1 0.1 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) FAD_binding_3 PF01494.19 NODE_63256_length_256_cov_3.542986_g55315_i0forward_frame_1 - 0.0068 15.7 0.0 0.0075 15.6 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain DUF1685 PF07939.11 NODE_63250_length_256_cov_4.104072_g55309_i0reverse_frame_1 - 0.043 13.6 0.0 0.075 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) Pep3_Vps18 PF05131.14 NODE_63243_length_256_cov_7.085973_g55302_i0forward_frame_1 - 0.09 12.6 0.1 0.099 12.5 0.1 1.1 1 0 0 1 1 1 0 Pep3/Vps18/deep orange family Glyco_transf_4 PF13439.6 NODE_63239_length_256_cov_37.443439_g55298_i0forward_frame_1 - 0.035 14.1 0.2 0.044 13.8 0.2 1.0 1 0 0 1 1 1 0 Glycosyltransferase Family 4 PDH PF02153.17 NODE_63235_length_256_cov_41.552036_g55294_i0reverse_frame_1 - 0.27 10.2 0.0 0.28 10.1 0.0 1.1 1 0 0 1 1 1 0 Prephenate dehydrogenase Choline_kin_N PF04428.14 NODE_63232_length_256_cov_45.692308_g55291_i0forward_frame_1 - 0.073 12.8 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Choline kinase N terminus zf-UBP PF02148.19 NODE_63225_length_256_cov_59.108597_g55284_i0reverse_frame_1 - 1.4e-10 41.4 0.3 1.4e-10 41.4 0.3 1.5 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein DUF4132 PF13569.6 NODE_63225_length_256_cov_59.108597_g55284_i0reverse_frame_1 - 0.004 17.0 0.0 0.0041 16.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4132) zinc_ribbon_9 PF14369.6 NODE_63225_length_256_cov_59.108597_g55284_i0reverse_frame_1 - 0.008 16.4 0.9 0.008 16.4 0.9 1.5 2 0 0 2 2 2 1 zinc-ribbon DUF4560 PF15118.6 NODE_63223_length_256_cov_63.067873_g55282_i0reverse_frame_1 - 0.057 13.3 0.2 0.1 12.5 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4560) Mo-nitro_C PF06967.11 NODE_63222_length_256_cov_65.045249_g55281_i0reverse_frame_1 - 0.037 14.0 0.2 0.044 13.7 0.2 1.1 1 0 0 1 1 1 0 Mo-dependent nitrogenase C-terminus Allexi_40kDa PF05549.11 NODE_63219_length_256_cov_73.113122_g55278_i0forward_frame_1 - 0.038 13.5 0.1 0.045 13.2 0.1 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein Sec63 PF02889.16 NODE_63218_length_256_cov_75.764706_g55277_i0reverse_frame_1 - 1.8e-19 70.0 0.0 2e-19 69.8 0.0 1.0 1 0 0 1 1 1 1 Sec63 Brl domain DUF3418 PF11898.8 NODE_63218_length_256_cov_75.764706_g55277_i0forward_frame_1 - 0.11 11.2 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3418) Ins_beta PF03488.14 NODE_63214_length_256_cov_84.434389_g55273_i0forward_frame_1 - 0.042 13.9 3.1 0.066 13.2 3.1 1.3 1 0 0 1 1 1 0 Nematode insulin-related peptide beta type ATP-synt_8 PF00895.20 NODE_63211_length_256_cov_98.538462_g55270_i0forward_frame_1 - 0.38 11.2 1.3 0.62 10.6 0.8 1.6 1 1 1 2 2 2 0 ATP synthase protein 8 CRR7 PF12095.8 NODE_63210_length_256_cov_101.443439_g55269_i0forward_frame_1 - 0.022 15.2 0.0 0.026 15.0 0.0 1.1 1 0 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 Rab15_effector PF15208.6 NODE_63197_length_256_cov_137.796380_g55256_i0reverse_frame_1 - 0.11 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Rab15 effector DUF5553 PF17707.1 NODE_63196_length_256_cov_142.515837_g55255_i0reverse_frame_1 - 0.02 14.4 0.6 0.023 14.1 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5553) Hydrophobin_2 PF06766.11 NODE_63192_length_256_cov_240.547511_g55251_i0forward_frame_1 - 0.59 10.1 10.6 0.34 10.9 2.4 2.2 1 1 1 2 2 2 0 Fungal hydrophobin DUF1676 PF07898.13 NODE_63189_length_256_cov_323.628959_g55248_i0forward_frame_1 - 4 7.5 8.7 4 7.4 8.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) EamA PF00892.20 NODE_63182_length_257_cov_0.936937_g55241_i0forward_frame_1 - 2.3e-05 24.6 0.9 2.7e-05 24.4 0.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family RcpC PF16976.5 NODE_63180_length_257_cov_0.977477_g55239_i0reverse_frame_1 - 0.065 13.3 0.7 0.072 13.1 0.7 1.1 1 0 0 1 1 1 0 Flp pilus assembly protein RcpC/CpaB TAF8_C PF10406.9 NODE_63179_length_257_cov_1.004505_g55238_i0reverse_frame_1 - 2.5 8.7 4.7 9.9 6.8 2.4 2.2 1 1 1 2 2 2 0 Transcription factor TFIID complex subunit 8 C-term Shugoshin_N PF07558.11 NODE_63176_length_257_cov_1.072072_g55235_i0reverse_frame_1 - 0.027 14.3 1.1 9.6 6.2 0.1 2.7 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region YabA PF06156.13 NODE_63176_length_257_cov_1.072072_g55235_i0reverse_frame_1 - 0.37 11.4 3.6 11 6.8 3.6 2.4 1 1 0 1 1 1 0 Initiation control protein YabA C4 PF01413.19 NODE_63168_length_257_cov_1.126126_g55227_i0reverse_frame_1 - 0.00018 21.8 0.6 0.00025 21.4 0.6 1.1 1 0 0 1 1 1 1 C-terminal tandem repeated domain in type 4 procollagen DUF1233 PF06806.12 NODE_63162_length_257_cov_1.337838_g55221_i0reverse_frame_1 - 0.016 14.8 0.0 0.02 14.5 0.0 1.1 1 0 0 1 1 1 0 Putative excisionase (DUF1233) Lar_restr_allev PF14354.6 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 6.8e-05 23.2 1.0 8.8e-05 22.8 1.0 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar TFIIS_C PF01096.18 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 8e-05 22.4 1.7 0.00015 21.6 1.7 1.4 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) zf-Dof PF02701.15 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 0.016 15.4 0.7 0.025 14.7 0.7 1.3 1 0 0 1 1 1 0 Dof domain, zinc finger DUF3268 PF11672.8 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 0.053 13.8 0.7 0.068 13.5 0.7 1.1 1 0 0 1 1 1 0 zinc-finger-containing domain Ogr_Delta PF04606.12 NODE_63152_length_257_cov_1.495495_g55211_i0forward_frame_1 - 0.074 13.0 3.7 0.24 11.4 3.7 1.8 1 1 0 1 1 1 0 Ogr/Delta-like zinc finger GerPB PF10803.8 NODE_63148_length_257_cov_1.531532_g55207_i0reverse_frame_1 - 0.067 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Spore germination GerPB FAM209 PF15206.6 NODE_63142_length_257_cov_1.617117_g55201_i0forward_frame_1 - 0.1 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 FAM209 family Orbi_NS1 PF01718.16 NODE_63139_length_257_cov_1.653153_g55198_i0forward_frame_1 - 0.077 11.5 0.4 0.08 11.4 0.4 1.1 1 0 0 1 1 1 0 Orbivirus non-structural protein NS1, or hydrophobic tubular protein Spt20 PF12090.8 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.0012 18.5 3.7 0.0012 18.5 3.7 1.1 1 0 0 1 1 1 1 Spt20 family CbtA PF09490.10 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.0031 17.3 1.1 0.0035 17.1 1.1 1.0 1 0 0 1 1 1 1 Probable cobalt transporter subunit (CbtA) Connexin PF00029.19 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.012 15.4 3.9 0.013 15.3 3.9 1.0 1 0 0 1 1 1 0 Connexin CSG2 PF16965.5 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.017 14.1 0.3 0.018 14.0 0.3 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator Pex14_N PF04695.13 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.019 15.6 1.8 0.023 15.3 1.8 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3675 PF12428.8 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.036 14.6 1.5 0.044 14.3 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) Orf78 PF06024.12 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.051 13.9 4.9 0.16 12.3 4.9 1.7 1 1 0 1 1 1 0 Orf78 (ac78) Ctr PF04145.15 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.074 13.7 3.0 0.085 13.5 3.0 1.1 1 0 0 1 1 1 0 Ctr copper transporter family BatD PF13584.6 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.084 11.7 0.0 0.096 11.5 0.0 1.0 1 0 0 1 1 1 0 Oxygen tolerance DUF4366 PF14283.6 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.095 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) DUF4407 PF14362.6 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.13 11.6 0.6 0.15 11.4 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) OATP PF03137.20 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.15 10.3 0.3 0.16 10.2 0.3 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Zip PF02535.22 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.17 11.1 7.7 0.2 10.8 7.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter CLN3 PF02487.17 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.28 10.2 2.8 0.33 10.0 2.8 1.0 1 0 0 1 1 1 0 CLN3 protein FAM76 PF16046.5 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.34 10.2 10.6 0.4 10.0 10.6 1.0 1 0 0 1 1 1 0 FAM76 protein SelP_N PF04592.14 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 0.73 9.2 26.4 0.86 9.0 26.4 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Endostatin PF06482.11 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 2 7.8 8.4 2.3 7.6 8.4 1.0 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin CAF20 PF17052.5 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_1 - 4.7 7.3 12.3 5.5 7.1 12.3 1.1 1 0 0 1 1 1 0 Cap associated factor Tlr3_TMD PF17968.1 NODE_63134_length_257_cov_1.738739_g55193_i0reverse_frame_1 - 2.1 8.6 6.6 0.54 10.5 3.1 1.8 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain DUF1077 PF06417.12 NODE_63130_length_257_cov_1.792793_g55189_i0reverse_frame_1 - 0.061 13.3 0.1 0.15 12.1 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1077) p450 PF00067.22 NODE_63130_length_257_cov_1.792793_g55189_i0forward_frame_1 - 0.00021 20.2 0.0 0.00023 20.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Ndc1_Nup PF09531.10 NODE_63129_length_257_cov_1.819820_g55188_i0reverse_frame_1 - 0.19 10.4 5.5 0.22 10.2 5.5 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup UbiA PF01040.18 NODE_63125_length_257_cov_1.900901_g55184_i0forward_frame_1 - 0.027 13.8 6.1 0.031 13.6 6.1 1.1 1 0 0 1 1 1 0 UbiA prenyltransferase family DUF3524 PF12038.8 NODE_63121_length_257_cov_1.950450_g55180_i0forward_frame_1 - 0.11 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) MFS_1 PF07690.16 NODE_63120_length_257_cov_1.977477_g55179_i0forward_frame_1 - 6.6e-08 31.9 3.4 6.6e-08 31.9 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_63120_length_257_cov_1.977477_g55179_i0forward_frame_1 - 0.0097 14.8 4.0 0.01 14.7 4.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter FANCL_C PF11793.8 NODE_63111_length_257_cov_2.139640_g55170_i0reverse_frame_1 - 0.11 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 FANCL C-terminal domain nlz1 PF12402.8 NODE_63109_length_257_cov_2.166667_g55168_i0forward_frame_1 - 0.092 13.2 0.1 0.14 12.6 0.1 1.3 1 0 0 1 1 1 0 NocA-like zinc-finger protein 1 HycA_repressor PF11046.8 NODE_63107_length_257_cov_2.225225_g55166_i0reverse_frame_1 - 0.037 14.2 0.3 0.053 13.7 0.1 1.5 1 1 0 1 1 1 0 Transcriptional repressor of hyc and hyp operons Ring_hydroxyl_A PF00848.19 NODE_63098_length_257_cov_2.432432_g55157_i0forward_frame_1 - 1.8e-11 44.4 0.4 1.8e-11 44.4 0.4 1.1 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) EGF_MSP1_1 PF12946.7 NODE_63091_length_257_cov_2.644144_g55150_i0reverse_frame_1 - 0.048 13.7 1.2 0.12 12.4 0.1 2.0 2 0 0 2 2 2 0 MSP1 EGF domain 1 DUF2691 PF10903.8 NODE_63088_length_257_cov_2.693694_g55147_i0reverse_frame_1 - 0.022 14.6 0.6 0.064 13.1 0.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2691) Dickkopf_N PF04706.12 NODE_63081_length_257_cov_3.463964_g55140_i0forward_frame_1 - 0.63 10.6 9.7 0.27 11.7 3.9 2.0 1 1 1 2 2 2 0 Dickkopf N-terminal cysteine-rich region PAS_9 PF13426.7 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 1.7e-11 44.2 0.0 2.1e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 5.9e-10 39.1 0.0 6.4e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 1.4e-05 25.0 0.0 1.7e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 PAS domain PAS_3 PF08447.12 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 0.00012 22.3 0.0 0.00015 21.9 0.0 1.2 1 0 0 1 1 1 1 PAS fold PAS_10 PF13596.6 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 0.0019 18.8 0.0 0.0022 18.6 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_1 - 0.034 14.4 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 PAS fold DUF3979 PF13141.6 NODE_63078_length_257_cov_3.585586_g55137_i0reverse_frame_1 - 0.092 13.0 0.6 0.11 12.8 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) T3SSipB PF16535.5 NODE_63077_length_257_cov_3.603604_g55136_i0forward_frame_1 - 0.0023 18.4 0.1 0.0028 18.1 0.1 1.0 1 0 0 1 1 1 1 Type III cell invasion protein SipB PRCC PF10253.9 NODE_63077_length_257_cov_3.603604_g55136_i0forward_frame_1 - 0.025 15.4 1.0 0.026 15.3 1.0 1.1 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting DUF2520 PF10728.9 NODE_63077_length_257_cov_3.603604_g55136_i0forward_frame_1 - 0.091 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2520) Phage_holin_2_1 PF04971.12 NODE_63074_length_257_cov_4.265766_g55133_i0forward_frame_1 - 0.0015 18.5 0.7 0.0023 17.9 0.7 1.3 1 0 0 1 1 1 1 Bacteriophage P21 holin S TMEM18 PF14770.6 NODE_63070_length_257_cov_17.054054_g55129_i0forward_frame_1 - 8.7 6.4 10.8 7.3 6.6 0.9 2.1 2 0 0 2 2 2 0 Transmembrane protein 18 TMIE PF16038.5 NODE_63066_length_257_cov_29.563063_g55125_i0reverse_frame_1 - 0.074 12.9 0.3 0.11 12.4 0.3 1.4 1 1 0 1 1 1 0 TMIE protein Myticin-prepro PF10690.9 NODE_63059_length_257_cov_53.225225_g55118_i0reverse_frame_1 - 0.34 11.2 3.2 0.43 10.9 3.2 1.2 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel CobT PF06213.12 NODE_63054_length_257_cov_59.914414_g55113_i0forward_frame_1 - 7.4 5.9 17.3 8.2 5.7 17.3 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT zf-RING_2 PF13639.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 3.7e-13 49.6 3.4 5.9e-13 48.9 3.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 3.7e-11 43.1 5.4 3.7e-11 43.1 5.4 2.1 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 3.7e-09 36.3 3.4 3.7e-09 36.3 3.4 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 8.6e-08 32.0 2.8 8.6e-08 32.0 2.8 1.7 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 1.7e-07 31.0 3.2 1.7e-07 31.0 3.2 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 2e-07 30.6 2.0 4.1e-07 29.6 2.0 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 5e-07 29.6 4.2 5e-07 29.6 4.2 1.8 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 6.4e-06 25.9 3.7 2e-05 24.3 3.6 1.8 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 8.2e-06 25.4 1.1 1.3e-05 24.7 1.1 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 1.3e-05 25.1 2.2 2e-05 24.6 2.2 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 3.3e-05 24.0 5.0 5.7e-05 23.2 2.0 2.6 2 1 1 3 3 3 1 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 3.7e-05 23.8 1.1 6.2e-05 23.1 1.1 1.5 1 0 0 1 1 1 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 5.3e-05 23.0 2.7 0.00015 21.5 2.6 1.7 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-Nse PF11789.8 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.0015 18.3 1.0 0.0027 17.5 1.0 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_10 PF16685.5 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.0021 18.2 3.0 0.0027 17.8 3.0 1.1 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-RING-like PF08746.11 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.006 16.9 1.2 0.006 16.9 1.2 1.6 2 1 0 2 2 1 1 RING-like domain U-box PF04564.15 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.025 14.8 0.0 0.056 13.6 0.0 1.7 1 1 0 1 1 1 0 U-box domain Zf_RING PF16744.5 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.045 13.9 1.0 0.08 13.1 1.0 1.5 1 1 0 1 1 1 0 KIAA1045 RING finger Baculo_RING PF05883.11 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.048 13.7 1.0 0.08 12.9 0.8 1.4 1 1 0 1 1 1 0 Baculovirus U-box/Ring-like domain RINGv PF12906.7 NODE_63051_length_257_cov_60.702703_g55110_i0forward_frame_1 - 0.43 10.7 9.0 0.67 10.1 6.4 2.3 2 1 1 3 3 2 0 RING-variant domain Neurensin PF14927.6 NODE_63049_length_257_cov_62.590090_g55108_i0reverse_frame_1 - 0.037 13.7 1.8 0.06 13.1 1.8 1.5 1 1 0 1 1 1 0 Neurensin Pico_P1A PF02226.16 NODE_63048_length_257_cov_66.657658_g55107_i0forward_frame_1 - 0.13 12.3 0.6 0.21 11.7 0.6 1.4 1 0 0 1 1 1 0 Picornavirus coat protein (VP4) Phage_ASH PF10554.9 NODE_63047_length_257_cov_66.972973_g55106_i0forward_frame_1 - 0.081 13.3 0.0 0.082 13.3 0.0 1.1 1 0 0 1 1 1 0 Ash protein family DUF4399 PF14347.6 NODE_63045_length_257_cov_75.067568_g55104_i0reverse_frame_1 - 0.11 12.9 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4399) pKID PF02173.17 NODE_63045_length_257_cov_75.067568_g55104_i0forward_frame_1 - 0.14 11.6 0.1 0.23 10.9 0.1 1.4 1 0 0 1 1 1 0 pKID domain SpoU_methylas_C PF12105.8 NODE_63034_length_257_cov_94.148649_g55093_i0reverse_frame_1 - 0.08 12.6 0.0 5.7 6.7 0.0 2.1 2 0 0 2 2 2 0 SpoU, rRNA methylase, C-terminal Glycos_transf_2 PF00535.26 NODE_63031_length_257_cov_100.481982_g55090_i0forward_frame_1 - 0.016 15.0 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF872 PF05915.12 NODE_63024_length_257_cov_119.247748_g55083_i0forward_frame_1 - 0.05 13.8 0.0 0.055 13.6 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) zinc_ribbon_12 PF11331.8 NODE_63020_length_257_cov_146.387387_g55079_i0forward_frame_1 - 0.04 13.7 0.4 0.04 13.7 0.4 1.6 2 0 0 2 2 2 0 Probable zinc-ribbon domain Spore_YunB PF09560.10 NODE_63019_length_257_cov_165.333333_g55078_i0forward_frame_1 - 0.0062 16.5 0.4 0.0071 16.3 0.4 1.1 1 0 0 1 1 1 1 Sporulation protein YunB (Spo_YunB) Apocytochr_F_N PF16639.5 NODE_63014_length_257_cov_4398.846847_g55073_i0forward_frame_1 - 4.4e-17 62.8 0.0 5.2e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 Apocytochrome F, N-terminal CA_like PF10563.9 NODE_63011_length_257_cov_13470.873874_g55070_i0forward_frame_1 - 0.037 14.0 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 Putative carbonic anhydrase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks310.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks310.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks310.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks310.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:18:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3772 PF12607.8 NODE_63002_length_258_cov_1.076233_g55061_i0reverse_frame_1 - 0.11 12.2 0.1 0.22 11.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) TNFR_16_TM PF18422.1 NODE_62986_length_258_cov_1.434978_g55045_i0reverse_frame_1 - 3.2 7.8 4.5 26 4.9 4.5 2.0 1 1 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain Biopterin_H PF00351.21 NODE_62984_length_258_cov_1.452915_g55043_i0reverse_frame_1 - 0.011 14.8 0.4 0.012 14.7 0.4 1.1 1 0 0 1 1 1 0 Biopterin-dependent aromatic amino acid hydroxylase DUF2721 PF11026.8 NODE_62984_length_258_cov_1.452915_g55043_i0forward_frame_1 - 2.7 7.9 9.7 1.8 8.4 8.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) EF-hand_1 PF00036.32 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 5.7e-06 25.5 0.3 0.00034 20.0 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.00028 21.3 1.1 0.064 13.7 0.4 1.9 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.0044 16.8 0.0 0.021 14.7 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain DUF2610 PF11020.8 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.056 13.3 0.0 4.8 7.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2610) EF-hand_8 PF13833.6 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.082 12.8 0.5 0.27 11.1 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_5 PF13202.6 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.089 12.3 1.3 0.094 12.3 0.0 1.7 2 0 0 2 2 2 0 EF hand NifU_N PF01592.16 NODE_62981_length_258_cov_1.502242_g55040_i0reverse_frame_1 - 0.18 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 NifU-like N terminal domain Crisp PF08562.10 NODE_62978_length_258_cov_1.538117_g55037_i0forward_frame_1 - 1.6 9.4 6.5 3.4 8.3 0.8 2.3 1 1 1 2 2 2 0 Crisp EIN3 PF04873.13 NODE_62975_length_258_cov_1.587444_g55034_i0forward_frame_1 - 0.058 12.7 0.6 0.063 12.6 0.6 1.0 1 0 0 1 1 1 0 Ethylene insensitive 3 MepB PF08877.10 NODE_62973_length_258_cov_1.636771_g55032_i0reverse_frame_1 - 0.026 14.2 0.1 0.03 14.0 0.1 1.1 1 0 0 1 1 1 0 MepB protein PolyG_pol PF01518.16 NODE_62966_length_258_cov_1.730942_g55025_i0reverse_frame_1 - 0.082 11.6 0.0 0.1 11.3 0.0 1.1 1 0 0 1 1 1 0 Sigma NS protein amfpi-1 PF12190.8 NODE_62963_length_258_cov_1.771300_g55022_i0forward_frame_1 - 0.044 14.4 0.2 0.064 13.9 0.2 1.3 1 0 0 1 1 1 0 Fungal protease inhibitor Tcf25 PF04910.14 NODE_62962_length_258_cov_1.775785_g55021_i0forward_frame_1 - 0.086 11.9 1.1 0.11 11.6 1.1 1.1 1 0 0 1 1 1 0 Transcriptional repressor TCF25 UL16 PF17622.2 NODE_62961_length_258_cov_1.780269_g55020_i0forward_frame_1 - 0.11 12.2 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Viral unique long protein 16 Lamprin PF06403.11 NODE_62951_length_258_cov_1.896861_g55010_i0reverse_frame_1 - 1.2 9.1 16.4 0.94 9.4 4.5 2.2 1 1 1 2 2 2 0 Lamprin Spem1 PF15670.5 NODE_62950_length_258_cov_1.937220_g55009_i0forward_frame_1 - 0.2 11.2 0.1 0.27 10.8 0.1 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 CoA_binding_3 PF13727.6 NODE_62948_length_258_cov_1.955157_g55007_i0forward_frame_1 - 0.031 14.3 0.3 0.034 14.2 0.3 1.1 1 0 0 1 1 1 0 CoA-binding domain Olduvai PF06758.13 NODE_62946_length_258_cov_1.991031_g55005_i0forward_frame_1 - 0.06 13.6 0.1 0.076 13.3 0.1 1.2 1 0 0 1 1 1 0 Olduvai domain hSac2 PF12456.8 NODE_62944_length_258_cov_1.995516_g55003_i0reverse_frame_1 - 0.13 12.0 0.1 0.18 11.5 0.1 1.1 1 0 0 1 1 1 0 Inositol phosphatase zf-C2H2_10 PF16588.5 NODE_62936_length_258_cov_2.147982_g54995_i0reverse_frame_1 - 0.0086 15.8 0.8 0.32 10.8 0.1 2.4 2 0 0 2 2 2 2 C2H2 zinc-finger Zf_RING PF16744.5 NODE_62932_length_258_cov_2.197309_g54991_i0forward_frame_1 - 0.58 10.3 5.1 0.76 9.9 0.8 2.1 1 1 1 2 2 2 0 KIAA1045 RING finger Reoviridae_Vp9 PF08978.10 NODE_62928_length_258_cov_2.269058_g54987_i0reverse_frame_1 - 0.081 12.1 0.0 0.092 11.9 0.0 1.1 1 0 0 1 1 1 0 Reoviridae VP9 CX PF01705.19 NODE_62917_length_258_cov_2.502242_g54976_i0reverse_frame_1 - 0.092 13.3 0.0 0.14 12.8 0.0 1.3 1 0 0 1 1 1 0 CX module DUF945 PF06097.11 NODE_62909_length_258_cov_2.726457_g54968_i0reverse_frame_1 - 4.3e-17 62.4 0.1 4.4e-17 62.4 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF945) FTP PF07504.13 NODE_62909_length_258_cov_2.726457_g54968_i0reverse_frame_1 - 0.059 13.2 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Fungalysin/Thermolysin Propeptide Motif SH PF01445.17 NODE_62905_length_258_cov_2.869955_g54964_i0reverse_frame_1 - 5.3 7.1 8.4 14 5.7 0.3 2.2 2 0 0 2 2 2 0 Viral small hydrophobic protein DUF1289 PF06945.13 NODE_62902_length_258_cov_2.937220_g54961_i0forward_frame_1 - 1.5e-09 37.5 4.9 2e-09 37.1 4.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1289) SOCS_box PF07525.16 NODE_62899_length_258_cov_3.228700_g54958_i0forward_frame_1 - 0.13 12.6 5.2 6.9 7.1 1.7 2.4 2 0 0 2 2 2 0 SOCS box DUF5339 PF17274.2 NODE_62897_length_258_cov_3.430493_g54956_i0forward_frame_1 - 0.0069 17.2 0.3 3.7 8.5 0.0 2.1 2 0 0 2 2 2 2 Family of unknown function (DUF5339) DUF1542 PF07564.11 NODE_62897_length_258_cov_3.430493_g54956_i0forward_frame_1 - 0.076 13.1 1.3 1.4 9.0 0.2 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1542) DUF3138 PF11336.8 NODE_62897_length_258_cov_3.430493_g54956_i0forward_frame_1 - 0.14 10.7 0.1 0.16 10.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Anth_synt_I_N PF04715.13 NODE_62894_length_258_cov_3.560538_g54953_i0reverse_frame_1 - 0.16 12.2 0.4 0.21 11.8 0.4 1.2 1 0 0 1 1 1 0 Anthranilate synthase component I, N terminal region Prominin PF05478.11 NODE_62892_length_258_cov_4.309417_g54951_i0reverse_frame_1 - 0.085 10.8 0.1 0.085 10.8 0.1 1.1 1 0 0 1 1 1 0 Prominin DUF4534 PF15049.6 NODE_62890_length_258_cov_4.457399_g54949_i0reverse_frame_1 - 0.022 14.5 4.4 0.028 14.2 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4534) DUF5395 PF17373.2 NODE_62885_length_258_cov_41.677130_g54944_i0forward_frame_1 - 0.034 14.8 0.0 0.039 14.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5395) MORN PF02493.20 NODE_62878_length_258_cov_52.726457_g54937_i0reverse_frame_1 - 4.5e-06 26.2 3.0 0.00077 19.2 0.2 2.7 3 0 0 3 3 3 2 MORN repeat NACHT PF05729.12 NODE_62874_length_258_cov_53.923767_g54933_i0forward_frame_1 - 0.21 11.5 2.5 0.77 9.7 0.5 1.9 1 1 1 2 2 2 0 NACHT domain U1snRNP70_N PF12220.8 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.0075 16.9 5.2 0.035 14.7 0.8 2.0 1 1 1 2 2 2 2 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal MCC-bdg_PDZ PF10506.9 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.05 13.6 0.9 0.3 11.1 0.5 1.9 2 0 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome CCDC-167 PF15188.6 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.053 13.9 0.9 0.077 13.3 0.9 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 eIF3_N PF09440.10 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.06 13.8 0.2 0.063 13.7 0.2 1.1 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain Coatomer_b_Cpla PF14806.6 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.064 13.2 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 Coatomer beta subunit appendage platform RasGAP_C PF03836.15 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.096 12.8 0.3 0.096 12.8 0.3 1.7 2 1 0 2 2 2 0 RasGAP C-terminus AsnC_trans_reg PF01037.21 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.13 12.3 0.3 0.22 11.5 0.2 1.4 2 0 0 2 2 2 0 Lrp/AsnC ligand binding domain DUF460 PF04312.13 NODE_62865_length_258_cov_67.349776_g54924_i0reverse_frame_1 - 0.13 12.0 0.1 0.16 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF460) PCP PF02429.15 NODE_62864_length_258_cov_71.977578_g54923_i0forward_frame_1 - 0.074 13.4 0.2 0.088 13.1 0.2 1.0 1 0 0 1 1 1 0 Peridinin-chlorophyll A binding protein FXR_C1 PF16096.5 NODE_62863_length_258_cov_72.354260_g54922_i0reverse_frame_1 - 1.9 8.7 4.5 2.5 8.4 4.5 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 Toxin_31 PF08119.11 NODE_62863_length_258_cov_72.354260_g54922_i0forward_frame_1 - 0.042 13.6 1.0 0.067 12.9 1.0 1.3 1 0 0 1 1 1 0 Scorpion acidic alpha-KTx toxin family Paramecium_SA PF01508.16 NODE_62860_length_258_cov_72.659193_g54919_i0reverse_frame_1 - 0.021 15.2 1.2 0.021 15.2 1.2 1.4 2 0 0 2 2 2 0 Paramecium surface antigen domain Nodulin_late PF07127.11 NODE_62858_length_258_cov_81.000000_g54917_i0reverse_frame_1 - 6.8 7.1 8.0 0.39 11.1 2.9 1.6 2 0 0 2 2 2 0 Late nodulin protein vATP-synt_E PF01991.18 NODE_62848_length_258_cov_109.811659_g54907_i0reverse_frame_1 - 1.4e-07 31.1 0.6 2e-07 30.6 0.6 1.3 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit LPD7 PF18821.1 NODE_62848_length_258_cov_109.811659_g54907_i0reverse_frame_1 - 0.062 13.4 0.2 0.063 13.4 0.2 1.2 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 7 DUF3189 PF11385.8 NODE_62848_length_258_cov_109.811659_g54907_i0reverse_frame_1 - 0.086 12.7 0.1 0.1 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3189) DMPK_coil PF08826.10 NODE_62846_length_258_cov_112.385650_g54905_i0reverse_frame_1 - 0.065 13.4 10.2 0.2 11.8 10.2 1.9 1 1 0 1 1 1 0 DMPK coiled coil domain like FPP PF05911.11 NODE_62846_length_258_cov_112.385650_g54905_i0reverse_frame_1 - 0.067 11.4 14.1 0.068 11.4 14.1 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil bZIP_2 PF07716.15 NODE_62846_length_258_cov_112.385650_g54905_i0reverse_frame_1 - 1.2 9.3 18.9 0.16 12.1 8.6 2.3 2 0 0 2 2 2 0 Basic region leucine zipper TMEM156 PF15106.6 NODE_62845_length_258_cov_117.887892_g54904_i0reverse_frame_1 - 0.012 15.0 2.0 0.014 14.8 2.0 1.1 1 0 0 1 1 1 0 TMEM156 protein family PEP_mutase PF13714.6 NODE_62840_length_258_cov_141.134529_g54899_i0reverse_frame_1 - 0.04 13.4 0.0 0.043 13.3 0.0 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase RPN2_C PF18004.1 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 0.47 10.4 20.9 0.56 10.1 20.9 1.0 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain LYRIC PF15686.5 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 0.68 9.4 20.4 0.75 9.3 20.4 1.0 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family MRI PF15325.6 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 1 10.5 13.0 0.75 10.9 11.1 1.7 1 1 1 2 2 2 0 Modulator of retrovirus infection DUF4604 PF15377.6 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 1.4 9.4 25.3 1.6 9.1 25.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) Pep1_7 PF17232.2 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 2 8.9 8.4 1.2 9.6 1.6 2.2 2 0 0 2 2 2 0 Elicitor peptide 1-7 DUF3275 PF11679.8 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_1 - 7.9 6.4 11.4 9.5 6.1 11.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) DUF3403 PF11883.8 NODE_62834_length_258_cov_897.421525_g54893_i0forward_frame_1 - 0.09 12.9 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3403) EamA PF00892.20 NODE_62830_length_259_cov_0.986607_g54889_i0forward_frame_3 - 1.7e-11 44.4 5.9 1.9e-11 44.3 5.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family PUNUT PF16913.5 NODE_62830_length_259_cov_0.986607_g54889_i0forward_frame_3 - 0.0031 16.8 4.1 0.0032 16.7 4.1 1.1 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport UAA PF08449.11 NODE_62830_length_259_cov_0.986607_g54889_i0forward_frame_3 - 0.0077 15.5 6.4 0.0076 15.5 6.4 1.0 1 0 0 1 1 1 1 UAA transporter family zinc_ribbon_11 PF11682.8 NODE_62829_length_259_cov_1.022321_g54888_i0forward_frame_2 - 0.085 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Probable zinc-ribbon Cas9_Topo PF17894.1 NODE_62828_length_259_cov_1.031250_g54887_i0reverse_frame_2 - 0.077 13.1 0.3 0.1 12.7 0.3 1.2 1 0 0 1 1 1 0 Topo homolgy domain in CRISPR-associated endonuclease Cas9 UPF0542 PF15086.6 NODE_62827_length_259_cov_1.062500_g54886_i0reverse_frame_3 - 0.12 12.3 3.1 0.2 11.6 3.1 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 NTS_2 PF15448.6 NODE_62825_length_259_cov_1.066964_g54884_i0forward_frame_2 - 0.031 14.6 0.4 0.075 13.4 0.4 1.6 1 0 0 1 1 1 0 N-terminal segments of P. falciparum erythrocyte membrane protein zf-C3HC4_4 PF15227.6 NODE_62820_length_259_cov_1.071429_g54879_i0reverse_frame_3 - 0.12 12.5 2.2 12 6.2 1.1 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 NODE_62820_length_259_cov_1.071429_g54879_i0forward_frame_3 - 0.19 12.1 3.0 0.47 10.8 3.0 1.6 1 1 0 1 1 1 0 Ring finger domain RRM_2 PF04059.12 NODE_62819_length_259_cov_1.089286_g54878_i0reverse_frame_3 - 5e-12 45.9 0.1 7.9e-12 45.2 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 2Fe-2S_thioredx PF01257.19 NODE_62819_length_259_cov_1.089286_g54878_i0reverse_frame_3 - 0.11 12.3 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like [2Fe-2S] ferredoxin UL20 PF17582.2 NODE_62819_length_259_cov_1.089286_g54878_i0forward_frame_2 - 6.6 5.9 8.9 7 5.8 8.9 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL20 DUF5009 PF16401.5 NODE_62818_length_259_cov_1.120536_g54877_i0forward_frame_3 - 0.15 11.6 5.2 0.15 11.5 5.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) Baculo_ME53 PF06061.11 NODE_62817_length_259_cov_1.129464_g54876_i0reverse_frame_3 - 0.0054 16.0 0.6 0.0062 15.8 0.6 1.0 1 0 0 1 1 1 1 Baculoviridae ME53 zf-C2HCIx2C PF10782.9 NODE_62817_length_259_cov_1.129464_g54876_i0reverse_frame_2 - 0.022 14.7 2.3 0.031 14.2 0.4 1.9 2 0 0 2 2 2 0 Zinc-finger WBP-1 PF11669.8 NODE_62810_length_259_cov_1.263393_g54869_i0reverse_frame_2 - 0.089 13.4 5.5 0.1 13.2 5.5 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 HSL_N PF06350.12 NODE_62808_length_259_cov_1.348214_g54867_i0forward_frame_3 - 0.096 11.6 0.1 0.097 11.6 0.1 1.1 1 0 0 1 1 1 0 Hormone-sensitive lipase (HSL) N-terminus DUF3874 PF12990.7 NODE_62808_length_259_cov_1.348214_g54867_i0forward_frame_3 - 0.17 12.3 1.8 1.2 9.5 0.1 2.2 1 1 1 2 2 2 0 Domain of unknonw function from B. Theta Gene description (DUF3874) Choline_kinase PF01633.20 NODE_62806_length_259_cov_1.352679_g54865_i0reverse_frame_2 - 0.016 14.8 0.6 0.02 14.5 0.2 1.4 1 1 0 1 1 1 0 Choline/ethanolamine kinase Ribosomal_L12_N PF16320.5 NODE_62806_length_259_cov_1.352679_g54865_i0reverse_frame_2 - 0.53 10.0 1.2 1.2 8.9 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain ComR_TPR PF18710.1 NODE_62804_length_259_cov_1.397321_g54863_i0reverse_frame_2 - 0.045 13.3 0.2 0.047 13.2 0.2 1.0 1 0 0 1 1 1 0 ComR tetratricopeptide Pyr_redox_2 PF07992.14 NODE_62802_length_259_cov_1.419643_g54861_i0reverse_frame_2 - 0.025 13.8 0.0 0.027 13.7 0.0 1.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ArgJ PF01960.18 NODE_62801_length_259_cov_1.419643_g54860_i0reverse_frame_3 - 1.4e-15 56.9 0.0 1.6e-15 56.8 0.0 1.0 1 0 0 1 1 1 1 ArgJ family Pardaxin PF07425.11 NODE_62801_length_259_cov_1.419643_g54860_i0reverse_frame_3 - 0.034 13.8 0.5 0.053 13.1 0.5 1.3 1 0 0 1 1 1 0 Pardaxin PhaC_N PF07167.13 NODE_62801_length_259_cov_1.419643_g54860_i0forward_frame_2 - 0.18 11.4 0.1 0.24 11.0 0.1 1.1 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus MORN PF02493.20 NODE_62798_length_259_cov_1.424107_g54857_i0reverse_frame_2 - 5.3e-16 57.5 22.5 5.1e-07 29.2 1.9 3.2 3 0 0 3 3 3 3 MORN repeat Catalase PF00199.19 NODE_62795_length_259_cov_1.437500_g54854_i0forward_frame_3 - 1.1e-33 116.9 2.5 1.1e-33 116.9 2.5 1.0 1 0 0 1 1 1 1 Catalase SOXp PF12336.8 NODE_62795_length_259_cov_1.437500_g54854_i0forward_frame_3 - 0.093 13.8 0.1 0.097 13.7 0.1 1.3 1 0 0 1 1 1 0 SOX transcription factor Defensin_beta_2 PF13841.6 NODE_62795_length_259_cov_1.437500_g54854_i0forward_frame_2 - 0.025 15.1 0.8 0.025 15.1 0.8 1.9 2 0 0 2 2 2 0 Beta defensin ORF6C PF10552.9 NODE_62793_length_259_cov_1.513393_g54852_i0reverse_frame_2 - 0.037 14.1 0.3 0.042 13.9 0.3 1.2 1 0 0 1 1 1 0 ORF6C domain Adeno_E1B_55K PF01696.17 NODE_62791_length_259_cov_1.584821_g54850_i0reverse_frame_3 - 0.01 14.6 0.3 0.011 14.5 0.3 1.0 1 0 0 1 1 1 1 Adenovirus EB1 55K protein / large t-antigen DUF4802 PF16060.5 NODE_62791_length_259_cov_1.584821_g54850_i0reverse_frame_3 - 0.13 12.4 0.2 0.21 11.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4802) SID PF11778.8 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_3 - 0.021 14.9 0.2 0.024 14.8 0.2 1.2 1 0 0 1 1 1 0 Septation initiation NMD3 PF04981.13 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_3 - 0.034 13.6 0.0 0.034 13.6 0.0 1.1 1 0 0 1 1 1 0 NMD3 family Thioredoxin_2 PF13098.6 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_3 - 0.04 14.4 0.1 0.055 13.9 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain UCH PF00443.29 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_2 - 0.016 14.7 0.1 0.018 14.6 0.1 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase PRiA4_ORF3 PF07929.11 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_2 - 0.051 13.3 0.0 0.063 13.0 0.0 1.1 1 0 0 1 1 1 0 Plasmid pRiA4b ORF-3-like protein HTH_Tnp_Tc3_1 PF11427.8 NODE_62791_length_259_cov_1.584821_g54850_i0forward_frame_2 - 0.16 11.9 0.1 0.28 11.1 0.1 1.4 1 0 0 1 1 1 0 Tc3 transposase Pox_F15 PF04596.12 NODE_62790_length_259_cov_1.598214_g54849_i0forward_frame_3 - 0.071 12.9 0.3 2.9 7.6 0.1 2.0 2 0 0 2 2 2 0 Poxvirus protein F15 Aldo_ket_red PF00248.21 NODE_62788_length_259_cov_1.607143_g54847_i0reverse_frame_2 - 0.0092 15.2 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family zf-Di19 PF05605.12 NODE_62787_length_259_cov_1.616071_g54846_i0reverse_frame_2 - 0.024 14.9 0.2 0.032 14.5 0.2 1.1 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding ING PF12998.7 NODE_62785_length_259_cov_1.656250_g54844_i0forward_frame_2 - 0.028 15.0 0.5 0.04 14.5 0.5 1.4 1 1 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding DUF1653 PF07866.11 NODE_62784_length_259_cov_1.665179_g54843_i0reverse_frame_3 - 0.1 12.9 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1653) SPECT1 PF18680.1 NODE_62784_length_259_cov_1.665179_g54843_i0forward_frame_2 - 0.13 11.9 1.3 0.15 11.7 1.3 1.0 1 0 0 1 1 1 0 Plasmodium host cell traversal SPECT1 NqrM PF04400.13 NODE_62783_length_259_cov_1.683036_g54842_i0forward_frame_3 - 2.6 7.9 11.2 0.82 9.5 6.2 2.1 1 1 1 2 2 2 0 (Na+)-NQR maturation NqrM zf-FCS PF06467.14 NODE_62780_length_259_cov_1.687500_g54839_i0reverse_frame_3 - 0.09 12.7 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif Inhibitor_Mig-6 PF11555.8 NODE_62779_length_259_cov_1.696429_g54838_i0reverse_frame_2 - 7 6.8 6.6 1 9.5 0.3 2.3 2 1 1 3 3 3 0 EGFR receptor inhibitor Mig-6 DDE_1 PF03184.19 NODE_62779_length_259_cov_1.696429_g54838_i0forward_frame_3 - 0.00023 20.9 0.0 0.00025 20.7 0.0 1.0 1 0 0 1 1 1 1 DDE superfamily endonuclease Pelovaterin PF17859.1 NODE_62777_length_259_cov_1.709821_g54836_i0reverse_frame_3 - 0.16 12.3 5.3 0.29 11.5 5.3 1.4 1 0 0 1 1 1 0 Pelovaterin DUF818 PF05677.12 NODE_62776_length_259_cov_1.732143_g54835_i0forward_frame_3 - 0.37 9.7 2.8 0.37 9.7 2.8 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) CATSPERG PF15064.6 NODE_62776_length_259_cov_1.732143_g54835_i0forward_frame_2 - 0.0093 13.8 1.0 0.011 13.6 1.0 1.0 1 0 0 1 1 1 1 Cation channel sperm-associated protein subunit gamma Defensin_5 PF18251.1 NODE_62774_length_259_cov_1.776786_g54833_i0reverse_frame_3 - 0.0021 18.1 7.0 0.0029 17.6 7.0 1.2 1 0 0 1 1 1 1 Fungal defensin Copsin CxC1 PF18802.1 NODE_62767_length_259_cov_1.852679_g54826_i0forward_frame_2 - 0.019 15.1 0.2 0.023 14.9 0.2 1.2 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases Molybdopterin PF00384.22 NODE_62765_length_259_cov_1.879464_g54824_i0reverse_frame_3 - 0.00081 18.5 0.0 0.00088 18.3 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase ThrE PF06738.12 NODE_62765_length_259_cov_1.879464_g54824_i0forward_frame_3 - 0.21 10.9 0.0 0.27 10.6 0.0 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter zf-TRM13_CCCH PF11722.8 NODE_62764_length_259_cov_1.883929_g54823_i0reverse_frame_3 - 0.73 9.6 4.6 12 5.7 1.1 2.3 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein TBCC PF07986.12 NODE_62759_length_259_cov_1.928571_g54818_i0reverse_frame_3 - 8e-28 96.6 3.0 8.6e-28 96.5 3.0 1.0 1 0 0 1 1 1 1 Tubulin binding cofactor C Spt4 PF06093.13 NODE_62759_length_259_cov_1.928571_g54818_i0reverse_frame_3 - 0.29 11.3 5.2 0.15 12.2 3.4 1.4 1 1 0 1 1 1 0 Spt4/RpoE2 zinc finger zf-RING-like PF08746.11 NODE_62759_length_259_cov_1.928571_g54818_i0reverse_frame_2 - 2.8 8.3 9.0 0.18 12.1 2.5 2.1 2 0 0 2 2 2 0 RING-like domain Ndc80_HEC PF03801.13 NODE_62756_length_259_cov_1.968750_g54815_i0reverse_frame_2 - 0.071 12.7 0.2 0.089 12.4 0.2 1.3 1 1 0 1 1 1 0 HEC/Ndc80p family Golgin_A5 PF09787.9 NODE_62754_length_259_cov_1.986607_g54813_i0reverse_frame_2 - 0.0034 16.9 6.1 0.0035 16.8 6.1 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 PI3K_P85_iSH2 PF16454.5 NODE_62754_length_259_cov_1.986607_g54813_i0reverse_frame_2 - 0.031 13.9 9.0 0.035 13.7 9.0 1.0 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain EamA PF00892.20 NODE_62753_length_259_cov_1.991071_g54812_i0forward_frame_3 - 0.00036 20.7 11.9 0.00041 20.5 11.9 1.1 1 0 0 1 1 1 1 EamA-like transporter family Peptidase_M16_C PF05193.21 NODE_62747_length_259_cov_2.183036_g54806_i0forward_frame_2 - 0.00025 21.1 0.0 0.00027 21.0 0.0 1.0 1 0 0 1 1 1 1 Peptidase M16 inactive domain DUF1759 PF03564.15 NODE_62746_length_259_cov_2.205357_g54805_i0forward_frame_3 - 0.15 12.0 0.0 0.19 11.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1759) Imm27 PF15590.6 NODE_62745_length_259_cov_2.209821_g54804_i0reverse_frame_3 - 0.16 11.7 1.8 0.24 11.2 1.2 1.6 1 1 0 1 1 1 0 Immunity protein 27 Toxin_9 PF02819.15 NODE_62745_length_259_cov_2.209821_g54804_i0reverse_frame_2 - 3.6 7.9 24.8 0.27 11.6 16.6 2.3 1 1 1 2 2 2 0 Spider toxin 7tm_1 PF00001.21 NODE_62745_length_259_cov_2.209821_g54804_i0forward_frame_3 - 0.017 14.5 0.8 0.017 14.5 0.8 1.7 1 1 1 2 2 2 0 7 transmembrane receptor (rhodopsin family) JSRP PF15312.6 NODE_62744_length_259_cov_2.214286_g54803_i0forward_frame_3 - 0.22 11.5 0.4 0.31 11.0 0.0 1.5 2 0 0 2 2 2 0 Junctional sarcoplasmic reticulum protein TPR_2 PF07719.17 NODE_62741_length_259_cov_2.223214_g54800_i0forward_frame_2 - 0.0025 17.8 0.3 0.0091 16.0 0.0 2.1 2 1 0 2 2 2 1 Tetratricopeptide repeat Anp1 PF03452.14 NODE_62741_length_259_cov_2.223214_g54800_i0forward_frame_2 - 0.083 12.3 0.0 0.086 12.2 0.0 1.1 1 0 0 1 1 1 0 Anp1 TPR_14 PF13428.6 NODE_62741_length_259_cov_2.223214_g54800_i0forward_frame_2 - 0.11 13.4 0.0 0.29 12.1 0.0 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat IBD PF10416.9 NODE_62739_length_259_cov_2.294643_g54798_i0reverse_frame_2 - 0.15 12.1 1.1 0.18 11.8 1.1 1.1 1 0 0 1 1 1 0 Transcription-initiator DNA-binding domain IBD Exonuc_VII_L PF02601.15 NODE_62739_length_259_cov_2.294643_g54798_i0forward_frame_2 - 3.3e-08 33.5 11.0 3.8e-08 33.2 11.0 1.0 1 0 0 1 1 1 1 Exonuclease VII, large subunit FYVE_2 PF02318.16 NODE_62734_length_259_cov_2.473214_g54793_i0reverse_frame_3 - 0.004 17.4 2.8 0.0046 17.2 2.8 1.2 1 0 0 1 1 1 1 FYVE-type zinc finger Zn-ribbon_8 PF09723.10 NODE_62734_length_259_cov_2.473214_g54793_i0reverse_frame_3 - 0.29 11.3 3.4 12 6.1 3.4 2.3 1 1 1 2 2 2 0 Zinc ribbon domain Meth_synt_1 PF08267.12 NODE_62734_length_259_cov_2.473214_g54793_i0reverse_frame_2 - 0.022 14.3 0.0 0.026 14.0 0.0 1.1 1 0 0 1 1 1 0 Cobalamin-independent synthase, N-terminal domain Shisa PF13908.6 NODE_62733_length_259_cov_2.553571_g54792_i0forward_frame_3 - 0.027 14.7 4.1 0.033 14.4 4.1 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF975 PF06161.11 NODE_62733_length_259_cov_2.553571_g54792_i0forward_frame_3 - 0.23 11.2 10.3 0.26 11.0 10.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF975) DUF4349 PF14257.6 NODE_62733_length_259_cov_2.553571_g54792_i0forward_frame_3 - 0.39 10.1 5.4 0.44 9.9 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DegT_DnrJ_EryC1 PF01041.17 NODE_62731_length_259_cov_2.633929_g54790_i0forward_frame_2 - 2.7e-36 125.7 2.0 2.8e-36 125.6 2.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family MSSP PF03940.13 NODE_62729_length_259_cov_2.656250_g54788_i0forward_frame_2 - 0.059 13.0 29.4 0.092 12.4 29.4 1.4 1 1 0 1 1 1 0 Male specific sperm protein DUF498 PF04430.14 NODE_62726_length_259_cov_2.732143_g54785_i0reverse_frame_3 - 0.036 14.1 0.0 0.038 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) DAO PF01266.24 NODE_62725_length_259_cov_2.785714_g54784_i0forward_frame_3 - 3.9e-05 23.4 0.0 4e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase IL13 PF03487.13 NODE_62721_length_259_cov_3.008929_g54780_i0forward_frame_3 - 0.021 14.6 0.3 0.021 14.6 0.3 1.1 1 0 0 1 1 1 0 Interleukin-13 Mo-co_dimer PF03404.16 NODE_62718_length_259_cov_3.156250_g54777_i0reverse_frame_2 - 0.079 13.0 0.0 0.091 12.8 0.0 1.1 1 0 0 1 1 1 0 Mo-co oxidoreductase dimerisation domain Peptidase_M15_3 PF08291.11 NODE_62718_length_259_cov_3.156250_g54777_i0forward_frame_3 - 0.065 13.3 0.0 0.076 13.1 0.0 1.2 1 0 0 1 1 1 0 Peptidase M15 SK_channel PF03530.14 NODE_62717_length_259_cov_3.290179_g54776_i0reverse_frame_3 - 0.046 13.7 0.3 0.054 13.5 0.3 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel DUF2457 PF10446.9 NODE_62715_length_259_cov_3.455357_g54774_i0reverse_frame_3 - 0.094 11.9 2.4 0.1 11.8 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Pox_TAP PF03355.14 NODE_62711_length_259_cov_4.075893_g54770_i0forward_frame_3 - 0.11 12.1 3.6 0.11 12.0 3.6 1.1 1 0 0 1 1 1 0 Viral Trans-Activator Protein Aida_C2 PF14186.6 NODE_62710_length_259_cov_4.098214_g54769_i0reverse_frame_3 - 0.19 11.3 0.5 0.21 11.2 0.5 1.2 1 0 0 1 1 1 0 Cytoskeletal adhesion Flt3_lig PF02947.14 NODE_62707_length_259_cov_4.821429_g54766_i0reverse_frame_2 - 0.073 13.3 0.4 0.09 13.0 0.4 1.1 1 0 0 1 1 1 0 flt3 ligand PH PF00169.29 NODE_62705_length_259_cov_10.080357_g54764_i0forward_frame_2 - 1.1e-05 25.8 0.5 1.6e-05 25.3 0.5 1.2 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 NODE_62705_length_259_cov_10.080357_g54764_i0forward_frame_2 - 0.042 14.1 0.3 0.059 13.6 0.3 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain Adeno_E3_CR2 PF02439.15 NODE_62704_length_259_cov_19.660714_g54763_i0reverse_frame_2 - 0.28 11.0 1.4 0.46 10.3 1.4 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 FSAP_sig_propep PF03032.15 NODE_62703_length_259_cov_20.937500_g54762_i0forward_frame_2 - 1.2 9.2 5.5 2.6 8.1 5.5 1.5 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide DHHC PF01529.20 NODE_62699_length_259_cov_28.955357_g54758_i0reverse_frame_2 - 0.013 15.7 0.1 0.016 15.3 0.1 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase RRM_1 PF00076.22 NODE_62695_length_259_cov_33.669643_g54754_i0forward_frame_2 - 2.2e-07 30.6 0.3 3.9e-07 29.8 0.1 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 NODE_62695_length_259_cov_33.669643_g54754_i0forward_frame_2 - 2e-05 24.2 0.0 2.2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 NODE_62695_length_259_cov_33.669643_g54754_i0forward_frame_2 - 0.0016 18.3 0.0 0.0021 17.9 0.0 1.2 1 0 0 1 1 1 1 Occluded RNA-recognition motif Limkain-b1 PF11608.8 NODE_62695_length_259_cov_33.669643_g54754_i0forward_frame_2 - 0.0029 17.6 0.4 0.006 16.6 0.1 1.6 1 1 0 2 2 2 1 Limkain b1 KCT2 PF17818.1 NODE_62693_length_259_cov_35.035714_g54752_i0forward_frame_2 - 0.63 10.1 1.4 0.95 9.6 1.4 1.2 1 0 0 1 1 1 0 Keratinocyte-associated gene product PqiA PF04403.13 NODE_62692_length_259_cov_35.049107_g54751_i0forward_frame_3 - 0.016 15.0 0.2 0.016 15.0 0.2 1.1 1 0 0 1 1 1 0 Paraquat-inducible protein A BrnT_toxin PF04365.13 NODE_62685_length_259_cov_46.138393_g54744_i0reverse_frame_3 - 0.15 12.4 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system FeoC PF09012.10 NODE_62683_length_259_cov_47.772321_g54742_i0reverse_frame_2 - 1.4 9.0 8.0 0.5 10.5 2.5 2.1 1 1 1 2 2 2 0 FeoC like transcriptional regulator SR-25 PF10500.9 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 0.044 13.4 25.1 0.047 13.3 25.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein STAC2_u1 PF16664.5 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 0.57 10.6 9.6 0.67 10.4 9.6 1.1 1 0 0 1 1 1 0 Unstructured on SH3 and cysteine-rich domain-containing protein 2 Vfa1 PF08432.10 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 1.2 9.4 19.9 1.3 9.3 19.9 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 PBP_sp32 PF07222.12 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 4 6.8 13.5 4.3 6.7 13.5 1.0 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Coilin_N PF15862.5 NODE_62682_length_259_cov_48.535714_g54741_i0forward_frame_2 - 4.3 7.2 21.1 4.9 6.9 21.1 1.1 1 0 0 1 1 1 0 Coilin N-terminus 2OG-FeII_Oxy_3 PF13640.6 NODE_62680_length_259_cov_52.334821_g54739_i0reverse_frame_3 - 0.056 14.3 0.0 0.071 14.0 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Corona_I PF03187.14 NODE_62676_length_259_cov_55.959821_g54735_i0reverse_frame_3 - 0.02 14.5 0.0 0.026 14.2 0.0 1.1 1 0 0 1 1 1 0 Corona nucleocapsid I protein GGN PF15685.5 NODE_62674_length_259_cov_57.892857_g54733_i0reverse_frame_3 - 0.23 10.5 3.5 0.26 10.3 3.5 1.0 1 0 0 1 1 1 0 Gametogenetin PolyG_pol PF01518.16 NODE_62673_length_259_cov_58.821429_g54732_i0reverse_frame_2 - 0.018 13.7 0.1 0.02 13.6 0.1 1.0 1 0 0 1 1 1 0 Sigma NS protein ubiquitin PF00240.23 NODE_62667_length_259_cov_68.517857_g54726_i0reverse_frame_3 - 1.2e-08 34.5 0.0 1.7e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_62667_length_259_cov_68.517857_g54726_i0reverse_frame_3 - 0.037 13.8 0.0 0.06 13.2 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like UPF0231 PF06062.11 NODE_62667_length_259_cov_68.517857_g54726_i0reverse_frame_3 - 0.046 14.0 0.0 0.057 13.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0231) TBK1_ULD PF18396.1 NODE_62667_length_259_cov_68.517857_g54726_i0reverse_frame_3 - 0.22 11.5 0.0 0.25 11.3 0.0 1.1 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain BTP PF05232.12 NODE_62665_length_259_cov_71.919643_g54724_i0forward_frame_3 - 0.0039 17.2 3.3 0.0067 16.5 3.3 1.4 1 1 0 1 1 1 1 Chlorhexidine efflux transporter GSK-3_bind PF05350.12 NODE_62664_length_259_cov_72.816964_g54723_i0forward_frame_3 - 0.028 13.8 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding Stomoxyn PF11585.8 NODE_62663_length_259_cov_74.116071_g54722_i0forward_frame_3 - 0.0016 18.4 0.1 0.0024 17.9 0.1 1.2 1 0 0 1 1 1 1 Insect antimicrobial peptide, stomoxyn TMEM154 PF15102.6 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 1.4e-05 25.0 0.0 1.7e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 TMEM154 protein family TMEM51 PF15345.6 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.00074 19.4 0.0 0.00081 19.3 0.0 1.0 1 0 0 1 1 1 1 Transmembrane protein 51 Herpes_gE PF02480.16 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.00075 18.4 0.0 0.00078 18.3 0.0 1.0 1 0 0 1 1 1 1 Alphaherpesvirus glycoprotein E DUF4448 PF14610.6 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.0016 18.3 0.0 0.002 18.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4448) UPF0560 PF10577.9 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.0042 15.7 0.0 0.0048 15.5 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0560 VSP PF03302.13 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.0046 15.9 0.0 0.0051 15.7 0.0 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein DUF5305 PF17231.2 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.011 15.1 0.0 0.012 15.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF3827 PF12877.7 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.013 14.0 0.0 0.014 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) DUF2207 PF09972.9 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.015 14.1 0.0 0.015 14.0 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Podoplanin PF05808.11 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.017 15.2 0.1 0.021 14.9 0.1 1.1 1 0 0 1 1 1 0 Podoplanin Orf78 PF06024.12 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.018 15.4 0.0 0.021 15.1 0.0 1.1 1 0 0 1 1 1 0 Orf78 (ac78) Tweety PF04906.13 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.031 13.0 0.0 0.037 12.7 0.0 1.0 1 0 0 1 1 1 0 Tweety Prominin PF05478.11 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.034 12.1 0.0 0.034 12.1 0.0 1.0 1 0 0 1 1 1 0 Prominin RIFIN PF02009.16 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.044 13.7 0.0 0.051 13.5 0.0 1.0 1 0 0 1 1 1 0 Rifin DUF3377 PF11857.8 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.057 13.3 0.6 0.093 12.7 0.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3377) Peptidase_M56 PF05569.11 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.067 12.4 0.0 0.079 12.1 0.0 1.0 1 0 0 1 1 1 0 BlaR1 peptidase M56 CrgA PF06781.12 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 0.1 12.7 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Cell division protein CrgA SKG6 PF08693.10 NODE_62661_length_259_cov_75.415179_g54720_i0forward_frame_3 - 5.7 6.4 13.0 0.35 10.3 5.1 2.2 1 1 1 2 2 2 0 Transmembrane alpha-helix domain TRAP_alpha PF03896.16 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 0.76 8.9 7.9 0.75 8.9 7.9 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Nop14 PF04147.12 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 2.3 6.4 15.6 2.4 6.3 15.6 1.0 1 0 0 1 1 1 0 Nop14-like family DUF4746 PF15928.5 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 3 7.2 11.7 3.4 7.0 11.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Zip PF02535.22 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 4.1 6.5 3.6 4 6.6 3.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter RRN3 PF05327.11 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 4.6 5.7 8.7 4.8 5.6 8.7 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 RNA_pol_3_Rpc31 PF11705.8 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 7.3 6.8 20.7 11 6.2 20.7 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DNA_pol_phi PF04931.13 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 7.4 4.5 16.1 7.5 4.5 16.1 1.2 1 0 0 1 1 1 0 DNA polymerase phi Pes-10 PF07149.11 NODE_62657_length_259_cov_92.031250_g54716_i0reverse_frame_3 - 9.1 5.2 13.8 9.2 5.2 13.8 1.0 1 0 0 1 1 1 0 Pes-10 COX14 PF14880.6 NODE_62657_length_259_cov_92.031250_g54716_i0forward_frame_3 - 0.25 11.2 4.4 0.59 10.0 4.4 1.7 1 1 0 1 1 1 0 Cytochrome oxidase c assembly PLDc_3 PF13918.6 NODE_62656_length_259_cov_92.794643_g54715_i0reverse_frame_3 - 0.18 11.5 0.1 0.21 11.2 0.1 1.1 1 0 0 1 1 1 0 PLD-like domain zf-TRM13_CCCH PF11722.8 NODE_62653_length_259_cov_129.491071_g54712_i0forward_frame_3 - 0.04 13.7 1.5 0.098 12.4 1.5 1.7 1 0 0 1 1 1 0 CCCH zinc finger in TRM13 protein Peptidase_C101 PF16218.5 NODE_62648_length_259_cov_156.053571_g54707_i0forward_frame_3 - 0.007 15.7 0.1 0.0074 15.6 0.1 1.0 1 0 0 1 1 1 1 Peptidase family C101 DUF728 PF05304.12 NODE_62648_length_259_cov_156.053571_g54707_i0forward_frame_3 - 0.63 9.9 3.8 0.83 9.5 3.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF728) RP854 PF17460.2 NODE_62645_length_259_cov_166.901786_g54704_i0reverse_frame_2 - 0.11 12.3 0.4 0.13 12.0 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein RP854 DNA_processg_A PF02481.15 NODE_62637_length_259_cov_591.736607_g54696_i0reverse_frame_3 - 0.14 11.4 0.0 0.16 11.2 0.0 1.2 1 1 0 1 1 1 0 DNA recombination-mediator protein A Antistasin PF02822.14 NODE_62635_length_259_cov_731.526786_g54694_i0reverse_frame_3 - 0.011 16.4 7.5 0.027 15.1 7.5 1.7 1 0 0 1 1 1 0 Antistasin family Prion_bPrPp PF11587.8 NODE_62635_length_259_cov_731.526786_g54694_i0forward_frame_2 - 0.11 12.4 0.2 0.2 11.5 0.2 1.4 1 0 0 1 1 1 0 Major prion protein bPrPp - N terminal URO-D PF01208.17 NODE_62630_length_260_cov_0.853333_g54689_i0forward_frame_2 - 0.1 11.7 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) Filo_VP24 PF06389.11 NODE_62626_length_260_cov_1.017778_g54685_i0forward_frame_3 - 0.03 13.8 0.1 0.032 13.7 0.1 1.1 1 0 0 1 1 1 0 Filovirus membrane-associated protein VP24 ArAE_2 PF10334.9 NODE_62618_length_260_cov_1.142222_g54677_i0reverse_frame_2 - 0.017 14.9 0.2 0.02 14.7 0.2 1.0 1 0 0 1 1 1 0 Aromatic acid exporter family member 2 DUF621 PF04789.15 NODE_62617_length_260_cov_1.155556_g54676_i0forward_frame_3 - 0.046 12.9 0.3 0.046 12.9 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF621) HEAT PF02985.22 NODE_62616_length_260_cov_1.164444_g54675_i0reverse_frame_3 - 0.071 13.4 0.1 13 6.4 0.0 2.8 2 1 1 3 3 3 0 HEAT repeat HEAT_2 PF13646.6 NODE_62616_length_260_cov_1.164444_g54675_i0reverse_frame_3 - 0.075 13.4 0.0 0.091 13.2 0.0 1.3 1 0 0 1 1 1 0 HEAT repeats SLT_L PF14718.6 NODE_62612_length_260_cov_1.235556_g54671_i0reverse_frame_3 - 0.023 14.8 0.2 0.032 14.3 0.2 1.3 1 0 0 1 1 1 0 Soluble lytic murein transglycosylase L domain DUF3232 PF11554.8 NODE_62612_length_260_cov_1.235556_g54671_i0reverse_frame_3 - 0.039 14.3 0.3 0.046 14.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) TMEM208_SND2 PF05620.11 NODE_62612_length_260_cov_1.235556_g54671_i0forward_frame_2 - 0.035 13.9 2.2 0.04 13.7 2.2 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 MREG PF15812.5 NODE_62611_length_260_cov_1.240000_g54670_i0forward_frame_2 - 0.089 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Melanoregulin V-ATPase_H_N PF03224.14 NODE_62609_length_260_cov_1.244444_g54668_i0forward_frame_2 - 0.014 14.7 0.6 0.016 14.5 0.6 1.1 1 0 0 1 1 1 0 V-ATPase subunit H 2TM PF13239.6 NODE_62605_length_260_cov_1.271111_g54664_i0forward_frame_3 - 0.11 12.8 0.4 0.14 12.5 0.4 1.2 1 0 0 1 1 1 0 2TM domain Lamprin PF06403.11 NODE_62604_length_260_cov_1.271111_g54663_i0forward_frame_3 - 0.15 12.1 5.7 0.17 11.8 5.7 1.2 1 0 0 1 1 1 0 Lamprin Alveol-reg_P311 PF11092.8 NODE_62602_length_260_cov_1.302222_g54661_i0reverse_frame_2 - 0.11 12.7 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Neuronal protein 3.1 (p311) DUF4797 PF16051.5 NODE_62599_length_260_cov_1.324444_g54658_i0forward_frame_3 - 0.041 13.8 0.1 0.069 13.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4797) CLIP_SPH_mas PF18398.1 NODE_62597_length_260_cov_1.391111_g54656_i0reverse_frame_3 - 0.086 13.3 0.0 0.16 12.4 0.0 1.4 1 0 0 1 1 1 0 Clip-domain serine protease homolog masquerade VKG_Carbox PF05090.14 NODE_62594_length_260_cov_1.413333_g54653_i0reverse_frame_3 - 0.0055 15.6 1.1 0.0061 15.4 1.1 1.0 1 0 0 1 1 1 1 Vitamin K-dependent gamma-carboxylase LCCL PF03815.19 NODE_62594_length_260_cov_1.413333_g54653_i0reverse_frame_3 - 0.047 13.8 1.1 0.054 13.6 1.1 1.1 1 0 0 1 1 1 0 LCCL domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks311.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks311.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks311.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks311.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pkinase PF00069.25 NODE_62589_length_260_cov_1.448889_g54648_i0forward_frame_3 - 4.8e-14 52.4 0.0 4.8e-14 52.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_62589_length_260_cov_1.448889_g54648_i0forward_frame_3 - 1.2e-09 37.9 0.0 1.2e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Arm PF00514.23 NODE_62587_length_260_cov_1.466667_g54646_i0reverse_frame_2 - 0.0012 18.8 0.0 0.0021 18.0 0.0 1.3 1 0 0 1 1 1 1 Armadillo/beta-catenin-like repeat RsfS PF02410.15 NODE_62584_length_260_cov_1.497778_g54643_i0reverse_frame_2 - 0.021 15.2 0.0 0.03 14.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal silencing factor during starvation DUF5631 PF18645.1 NODE_62584_length_260_cov_1.497778_g54643_i0forward_frame_3 - 0.02 15.3 0.0 0.023 15.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5631) PPL5 PF18168.1 NODE_62579_length_260_cov_1.524444_g54638_i0forward_frame_3 - 1.7 7.9 4.5 2 7.7 4.5 1.0 1 0 0 1 1 1 0 Prim-pol family 5 Eapp_C PF10238.9 NODE_62579_length_260_cov_1.524444_g54638_i0forward_frame_3 - 5.2 7.1 9.0 9.1 6.4 9.0 1.4 1 1 0 1 1 1 0 E2F-associated phosphoprotein AP3D1 PF06375.11 NODE_62579_length_260_cov_1.524444_g54638_i0forward_frame_2 - 0.64 10.2 4.6 0.72 10.1 4.6 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Knl1_RWD_C PF18210.1 NODE_62578_length_260_cov_1.555556_g54637_i0forward_frame_2 - 0.024 15.1 0.1 0.024 15.1 0.1 1.2 1 0 0 1 1 1 0 Knl1 RWD C-terminal domain DUF1450 PF07293.11 NODE_62577_length_260_cov_1.555556_g54636_i0forward_frame_3 - 0.0083 15.9 1.3 0.011 15.6 1.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1450) CD225 PF04505.12 NODE_62574_length_260_cov_1.564444_g54633_i0reverse_frame_3 - 8.3 6.6 11.6 0.26 11.4 1.0 2.2 1 1 1 2 2 2 0 Interferon-induced transmembrane protein V-ATPase_H_C PF11698.8 NODE_62574_length_260_cov_1.564444_g54633_i0forward_frame_2 - 0.085 13.0 0.1 0.098 12.8 0.1 1.1 1 0 0 1 1 1 0 V-ATPase subunit H Cornichon PF03311.14 NODE_62573_length_260_cov_1.564444_g54632_i0reverse_frame_2 - 0.0084 16.4 1.4 0.048 14.0 0.6 2.0 1 1 1 2 2 2 1 Cornichon protein DUF1980 PF09323.10 NODE_62573_length_260_cov_1.564444_g54632_i0forward_frame_3 - 0.44 10.5 5.8 0.53 10.2 5.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF3671 PF12420.8 NODE_62573_length_260_cov_1.564444_g54632_i0forward_frame_3 - 1.2 9.2 7.8 2 8.5 7.8 1.4 1 1 0 1 1 1 0 Protein of unknown function UBA_3 PF09288.10 NODE_62571_length_260_cov_1.600000_g54630_i0reverse_frame_3 - 0.021 14.6 1.2 5.3 6.9 0.1 2.2 2 0 0 2 2 2 0 Fungal ubiquitin-associated domain DUF2678 PF10856.8 NODE_62571_length_260_cov_1.600000_g54630_i0forward_frame_2 - 6.2 6.8 10.1 1.3 9.0 3.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2678) SLC3A2_N PF16028.5 NODE_62563_length_260_cov_1.773333_g54622_i0reverse_frame_2 - 0.17 11.5 0.4 0.26 10.9 0.4 1.4 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Spt4 PF06093.13 NODE_62558_length_260_cov_1.831111_g54617_i0forward_frame_2 - 6.2e-16 58.3 2.1 8.5e-16 57.8 2.1 1.2 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger TBCC PF07986.12 NODE_62558_length_260_cov_1.831111_g54617_i0forward_frame_2 - 0.011 15.5 0.3 0.013 15.2 0.3 1.1 1 0 0 1 1 1 0 Tubulin binding cofactor C DUF892 PF05974.12 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 4.6e-23 82.0 0.3 4.9e-23 81.9 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) DUF871 PF05913.11 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.00015 21.1 0.1 0.00015 21.1 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF871) THOC7 PF05615.13 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.0048 17.2 1.4 0.0057 16.9 1.4 1.1 1 0 0 1 1 1 1 Tho complex subunit 7 Tektin PF03148.14 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.0073 15.1 1.0 0.0073 15.1 1.0 1.1 1 0 0 1 1 1 1 Tektin family HR1 PF02185.16 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.013 15.6 1.1 0.018 15.1 0.9 1.3 1 1 0 1 1 1 0 Hr1 repeat IDO PF01231.18 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.024 13.4 0.4 0.027 13.3 0.4 1.0 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase LemA PF04011.12 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.061 13.2 0.1 0.063 13.1 0.1 1.3 1 0 0 1 1 1 0 LemA family GatB_Yqey PF02637.18 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.068 13.0 0.2 0.083 12.8 0.2 1.3 1 1 0 1 1 1 0 GatB domain DNA_repr_REX1B PF14966.6 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.079 13.6 0.3 0.095 13.4 0.3 1.1 1 0 0 1 1 1 0 DNA repair REX1-B DUF883 PF05957.13 NODE_62552_length_260_cov_1.911111_g54611_i0reverse_frame_2 - 0.13 12.9 0.2 0.2 12.3 0.2 1.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CxC2 PF18803.1 NODE_62550_length_260_cov_1.955556_g54609_i0forward_frame_2 - 0.14 12.3 1.5 4 7.6 0.2 2.0 1 1 1 2 2 2 0 CxC2 like cysteine cluster associated with KDZ transposases DUF3685 PF12452.8 NODE_62548_length_260_cov_2.031111_g54607_i0forward_frame_2 - 0.038 13.7 0.1 0.038 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) Phe_ZIP PF08916.11 NODE_62547_length_260_cov_2.075556_g54606_i0forward_frame_3 - 0.31 11.8 7.2 0.42 11.4 7.2 1.2 1 0 0 1 1 1 0 Phenylalanine zipper Pardaxin PF07425.11 NODE_62547_length_260_cov_2.075556_g54606_i0forward_frame_2 - 0.9 9.2 3.6 0.35 10.5 0.4 2.0 2 0 0 2 2 2 0 Pardaxin Fanconi_A_N PF15865.5 NODE_62544_length_260_cov_2.128889_g54603_i0reverse_frame_2 - 0.092 12.1 0.5 0.11 11.8 0.5 1.0 1 0 0 1 1 1 0 Fanconi anaemia group A protein N terminus Reticulon PF02453.17 NODE_62541_length_260_cov_2.195556_g54600_i0reverse_frame_3 - 0.0079 16.2 0.3 0.0088 16.0 0.3 1.1 1 0 0 1 1 1 1 Reticulon ArsP_2 PF11449.8 NODE_62541_length_260_cov_2.195556_g54600_i0reverse_frame_3 - 0.084 12.1 0.3 0.097 11.9 0.3 1.0 1 0 0 1 1 1 0 Putative, 10TM heavy-metal exporter DUF3223 PF11523.8 NODE_62539_length_260_cov_2.235556_g54598_i0forward_frame_2 - 1.9e-16 60.6 0.9 2.6e-16 60.2 0.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3223) DUF5101 PF17031.5 NODE_62539_length_260_cov_2.235556_g54598_i0forward_frame_2 - 0.013 15.6 0.2 0.018 15.1 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) DUF4120 PF13496.6 NODE_62539_length_260_cov_2.235556_g54598_i0forward_frame_2 - 0.13 12.6 0.7 0.48 10.8 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4120) fn3_4 PF16794.5 NODE_62534_length_260_cov_2.293333_g54593_i0forward_frame_3 - 0.11 12.4 0.3 0.14 12.1 0.3 1.1 1 0 0 1 1 1 0 Fibronectin-III type domain Kinesin PF00225.23 NODE_62532_length_260_cov_2.302222_g54591_i0reverse_frame_3 - 9.4e-16 57.6 2.0 1.1e-15 57.4 2.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain RPT PF13446.6 NODE_62532_length_260_cov_2.302222_g54591_i0reverse_frame_3 - 0.011 15.7 0.1 0.016 15.1 0.1 1.4 1 1 0 1 1 1 0 A repeated domain in UCH-protein MFS_3 PF05977.13 NODE_62532_length_260_cov_2.302222_g54591_i0reverse_frame_3 - 0.027 12.9 0.1 0.03 12.7 0.1 1.0 1 0 0 1 1 1 0 Transmembrane secretion effector YuiB PF14068.6 NODE_62532_length_260_cov_2.302222_g54591_i0forward_frame_3 - 0.012 16.2 0.1 0.012 16.2 0.1 1.9 1 1 1 2 2 2 0 Putative membrane protein Inhibitor_I67 PF11405.8 NODE_62531_length_260_cov_2.320000_g54590_i0forward_frame_3 - 0.044 14.0 0.1 0.07 13.4 0.1 1.3 1 0 0 1 1 1 0 Bromelain inhibitor VI Uteroglobin PF01099.17 NODE_62529_length_260_cov_2.386667_g54588_i0reverse_frame_2 - 0.098 13.0 0.0 0.22 11.9 0.0 1.5 1 1 1 2 2 2 0 Uteroglobin family MFS_1 PF07690.16 NODE_62526_length_260_cov_2.453333_g54585_i0forward_frame_3 - 0.00056 18.9 9.6 0.00066 18.7 9.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ITAM_Cys-rich PF10538.9 NODE_62518_length_260_cov_2.662222_g54577_i0reverse_frame_2 - 0.13 12.0 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Immunoreceptor tyrosine-based activation motif UPF0181 PF03701.14 NODE_62517_length_260_cov_2.684444_g54576_i0forward_frame_2 - 1.7e-13 50.0 1.8 2.4e-13 49.5 1.8 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0181) zf-C2H2_7 PF15269.6 NODE_62515_length_260_cov_2.786667_g54574_i0reverse_frame_2 - 0.16 12.1 1.1 0.69 10.0 0.1 2.0 1 1 1 2 2 2 0 Zinc-finger Exo_endo_phos PF03372.23 NODE_62512_length_260_cov_2.822222_g54571_i0reverse_frame_3 - 0.012 15.2 0.1 0.021 14.3 0.1 1.4 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Nudix_N_2 PF14803.6 NODE_62512_length_260_cov_2.822222_g54571_i0forward_frame_2 - 0.033 14.1 0.8 0.11 12.5 0.2 2.1 2 0 0 2 2 2 0 Nudix N-terminal Ferritin PF00210.24 NODE_62511_length_260_cov_2.857778_g54570_i0reverse_frame_2 - 1.3e-14 54.3 0.0 1.5e-14 54.1 0.0 1.0 1 0 0 1 1 1 1 Ferritin-like domain MATalpha_HMGbox PF04769.12 NODE_62511_length_260_cov_2.857778_g54570_i0reverse_frame_2 - 0.035 13.4 0.0 0.037 13.3 0.0 1.1 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box RE_Alw26IDE PF09665.10 NODE_62510_length_260_cov_2.857778_g54569_i0reverse_frame_2 - 0.1 11.7 0.6 0.11 11.7 0.6 1.0 1 0 0 1 1 1 0 Type II restriction endonuclease (RE_Alw26IDE) SHIPPO-rpt PF07004.12 NODE_62507_length_260_cov_2.915556_g54566_i0reverse_frame_2 - 0.0045 17.8 1.9 0.0083 17.0 1.9 1.5 1 0 0 1 1 1 1 Sperm-tail PG-rich repeat BTK PF00779.19 NODE_62506_length_260_cov_2.964444_g54565_i0reverse_frame_3 - 0.057 13.2 1.2 0.057 13.2 1.2 3.1 3 0 0 3 3 3 0 BTK motif Circo_capsid PF02443.15 NODE_62503_length_260_cov_3.111111_g54562_i0reverse_frame_3 - 6.9 6.2 15.5 6.9 6.2 15.5 1.1 1 0 0 1 1 1 0 Circovirus capsid protein DUF2222 PF09984.9 NODE_62502_length_260_cov_3.151111_g54561_i0reverse_frame_2 - 0.0043 16.9 0.9 0.0051 16.7 0.9 1.0 1 0 0 1 1 1 1 Uncharacterised signal transduction histidine kinase domain (DUF2222) DUF4857 PF16149.5 NODE_62502_length_260_cov_3.151111_g54561_i0reverse_frame_2 - 0.018 14.3 0.1 0.024 13.9 0.0 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4857) Disaggr_assoc PF08480.10 NODE_62501_length_260_cov_3.253333_g54560_i0reverse_frame_2 - 0.032 14.1 0.0 0.032 14.1 0.0 1.2 1 0 0 1 1 1 0 Disaggregatase related Bacteroid_pep PF14406.6 NODE_62501_length_260_cov_3.253333_g54560_i0reverse_frame_2 - 0.087 13.2 0.2 0.15 12.4 0.1 1.6 1 1 0 1 1 1 0 Ribosomally synthesized peptide in Bacteroidetes zinc_ribbon_12 PF11331.8 NODE_62500_length_260_cov_3.480000_g54559_i0forward_frame_2 - 0.054 13.3 0.1 0.054 13.3 0.1 2.4 2 1 0 2 2 2 0 Probable zinc-ribbon domain IFR3_antag PF14754.6 NODE_62500_length_260_cov_3.480000_g54559_i0forward_frame_2 - 0.13 11.4 1.1 0.17 11.1 1.1 1.1 1 0 0 1 1 1 0 Papain-like auto-proteinase AzlC PF03591.14 NODE_62499_length_260_cov_3.502222_g54558_i0forward_frame_3 - 1.7e-14 54.5 1.2 1.8e-14 54.4 1.2 1.0 1 0 0 1 1 1 1 AzlC protein Glyco_tran_WecB PF03808.13 NODE_62499_length_260_cov_3.502222_g54558_i0forward_frame_3 - 0.058 13.3 0.1 0.069 13.1 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family DNAJ_related PF12339.8 NODE_62498_length_260_cov_3.506667_g54557_i0reverse_frame_2 - 0.019 15.2 0.3 0.026 14.8 0.3 1.1 1 0 0 1 1 1 0 DNA-J related protein Glucos_trans_II PF14264.6 NODE_62497_length_260_cov_3.582222_g54556_i0reverse_frame_2 - 0.007 15.8 5.2 0.0082 15.5 5.2 1.0 1 0 0 1 1 1 1 Glucosyl transferase GtrII DUF2650 PF10853.8 NODE_62497_length_260_cov_3.582222_g54556_i0reverse_frame_2 - 2.2 8.0 9.0 0.23 11.2 2.8 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2650) Prion_bPrPp PF11587.8 NODE_62494_length_260_cov_3.897778_g54553_i0forward_frame_3 - 0.91 9.4 4.9 1.5 8.7 4.9 1.3 1 0 0 1 1 1 0 Major prion protein bPrPp - N terminal cIII PF08134.11 NODE_62493_length_260_cov_4.320000_g54552_i0reverse_frame_3 - 0.02 14.6 1.3 0.037 13.8 1.3 1.4 1 0 0 1 1 1 0 cIII protein family HALZ PF02183.18 NODE_62490_length_260_cov_19.031111_g54549_i0forward_frame_3 - 0.043 14.1 0.5 0.063 13.5 0.5 1.3 1 0 0 1 1 1 0 Homeobox associated leucine zipper DUF1461 PF07314.11 NODE_62489_length_260_cov_33.208889_g54548_i0forward_frame_2 - 0.3 11.0 10.5 0.48 10.3 10.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1461) MORN PF02493.20 NODE_62488_length_260_cov_35.168889_g54547_i0reverse_frame_2 - 4.6e-10 38.8 14.0 0.00012 21.7 2.7 3.3 3 0 0 3 3 3 3 MORN repeat Antirestrict PF03230.13 NODE_62488_length_260_cov_35.168889_g54547_i0reverse_frame_2 - 0.16 12.0 0.2 1.2 9.2 0.2 1.9 1 1 1 2 2 2 0 Antirestriction protein ImmE5 PF11480.8 NODE_62488_length_260_cov_35.168889_g54547_i0reverse_frame_2 - 0.45 11.0 5.5 6 7.4 0.5 2.1 1 1 1 2 2 2 0 Colicin-E5 Imm protein PsiB PF06290.11 NODE_62487_length_260_cov_36.737778_g54546_i0reverse_frame_2 - 0.18 11.3 0.0 0.26 10.7 0.0 1.3 1 1 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) PDR_assoc PF08370.11 NODE_62485_length_260_cov_38.813333_g54544_i0forward_frame_3 - 0.1 12.4 0.6 2.2 8.1 0.2 2.1 1 1 1 2 2 2 0 Plant PDR ABC transporter associated CMS1 PF14617.6 NODE_62484_length_260_cov_40.791111_g54543_i0reverse_frame_3 - 0.13 11.5 0.0 0.14 11.5 0.0 1.0 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit ATP-synt_8 PF00895.20 NODE_62483_length_260_cov_42.746667_g54542_i0forward_frame_2 - 8.8 6.9 6.4 6.8 7.2 4.2 1.9 1 1 2 3 3 3 0 ATP synthase protein 8 Tetraspanin PF00335.20 NODE_62482_length_260_cov_45.280000_g54541_i0reverse_frame_3 - 0.65 9.7 4.2 0.67 9.6 4.2 1.0 1 0 0 1 1 1 0 Tetraspanin family SWIM PF04434.17 NODE_62482_length_260_cov_45.280000_g54541_i0forward_frame_2 - 0.025 14.2 2.5 0.025 14.2 2.5 2.0 2 0 0 2 2 2 0 SWIM zinc finger DUF4379 PF14311.6 NODE_62478_length_260_cov_47.706667_g54537_i0reverse_frame_2 - 0.0068 16.8 2.6 0.0096 16.3 2.6 1.4 1 0 0 1 1 1 1 Probable Zinc-ribbon domain YfhO PF09586.10 NODE_62478_length_260_cov_47.706667_g54537_i0forward_frame_3 - 3.8 5.6 7.5 4 5.6 7.5 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Methyltrn_RNA_2 PF04013.12 NODE_62477_length_260_cov_48.013333_g54536_i0reverse_frame_2 - 0.0046 16.7 0.0 0.0061 16.3 0.0 1.1 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase Levi_coat PF01819.17 NODE_62477_length_260_cov_48.013333_g54536_i0forward_frame_3 - 0.18 11.8 1.6 0.22 11.5 1.6 1.1 1 0 0 1 1 1 0 Levivirus coat protein DUF1361 PF07099.11 NODE_62476_length_260_cov_53.937778_g54535_i0reverse_frame_3 - 0.13 12.2 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1361) Comm PF15957.5 NODE_62476_length_260_cov_53.937778_g54535_i0reverse_frame_3 - 0.15 12.4 0.1 0.16 12.3 0.1 1.1 1 0 0 1 1 1 0 Commissureless DUF645 PF04875.12 NODE_62476_length_260_cov_53.937778_g54535_i0reverse_frame_2 - 0.047 13.7 0.2 0.25 11.4 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function, DUF645 Ornatin PF02088.15 NODE_62476_length_260_cov_53.937778_g54535_i0reverse_frame_2 - 0.057 13.2 1.4 0.11 12.4 1.4 1.4 1 0 0 1 1 1 0 Ornatin Cation_ATPase_C PF00689.21 NODE_62476_length_260_cov_53.937778_g54535_i0forward_frame_3 - 1.8 8.2 7.9 2 8.1 7.9 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus TerY_C PF15616.6 NODE_62472_length_260_cov_57.222222_g54531_i0forward_frame_3 - 0.12 12.4 1.4 0.18 11.9 1.5 1.3 1 1 0 1 1 1 0 TerY-C metal binding domain CCT PF06203.14 NODE_62471_length_260_cov_57.853333_g54530_i0reverse_frame_2 - 0.0012 18.8 2.8 0.0012 18.8 2.8 2.6 2 1 0 2 2 2 1 CCT motif Mucin PF01456.17 NODE_62469_length_260_cov_60.977778_g54528_i0reverse_frame_3 - 4.8 7.2 6.8 10 6.1 6.8 1.6 1 1 0 1 1 1 0 Mucin-like glycoprotein Kelch_1 PF01344.25 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 1.1e-13 50.5 0.0 1.1e-13 50.5 0.0 1.5 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 2.7e-10 40.2 0.0 3.4e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 3e-09 36.7 0.0 3.8e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 2.3e-07 30.9 0.8 3.6e-07 30.3 0.2 1.6 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 4.1e-06 26.5 0.1 1.5e-05 24.7 0.1 1.8 1 1 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 NODE_62466_length_260_cov_64.048889_g54525_i0forward_frame_2 - 0.05 13.6 0.3 0.11 12.5 0.0 1.8 2 0 0 2 2 2 0 Kelch motif TBPIP_N PF15517.6 NODE_62464_length_260_cov_65.702222_g54523_i0reverse_frame_2 - 0.063 13.3 0.0 0.072 13.1 0.0 1.1 1 0 0 1 1 1 0 TBP-interacting protein N-terminus DUF4462 PF14692.6 NODE_62463_length_260_cov_66.453333_g54522_i0reverse_frame_2 - 0.15 11.5 0.9 0.24 10.9 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) zf-TRAF_2 PF15965.5 NODE_62462_length_260_cov_69.208889_g54521_i0reverse_frame_2 - 0.0091 16.4 1.6 0.0091 16.4 1.6 1.6 1 1 1 2 2 2 1 TRAF-like zinc-finger Med2 PF11214.8 NODE_62456_length_260_cov_76.693333_g54515_i0forward_frame_3 - 0.069 13.3 0.1 0.082 13.1 0.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 2 Adeno_E3_CR2 PF02439.15 NODE_62454_length_260_cov_82.746667_g54513_i0reverse_frame_3 - 0.096 12.5 1.3 0.21 11.4 1.3 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 DUF1952 PF09189.10 NODE_62452_length_260_cov_88.115556_g54511_i0reverse_frame_3 - 0.13 12.2 0.1 0.16 11.9 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1952) Copine PF07002.16 NODE_62449_length_260_cov_91.524444_g54508_i0reverse_frame_3 - 0.16 11.4 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 Copine DUF1534 PF07551.11 NODE_62448_length_260_cov_93.288889_g54507_i0forward_frame_2 - 0.076 12.8 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1534) Adeno_E3_CR1 PF02440.15 NODE_62446_length_260_cov_101.328889_g54505_i0reverse_frame_3 - 0.12 12.2 0.5 0.14 12.0 0.5 1.2 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 Ribosomal_S30 PF04758.14 NODE_62445_length_260_cov_105.626667_g54504_i0reverse_frame_2 - 6.2e-21 74.3 9.7 6.2e-21 74.3 9.7 2.1 2 0 0 2 2 2 1 Ribosomal protein S30 RNase_E_G PF10150.9 NODE_62445_length_260_cov_105.626667_g54504_i0forward_frame_2 - 0.098 12.1 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease E/G family PRMT5_C PF17286.2 NODE_62442_length_260_cov_112.026667_g54501_i0reverse_frame_3 - 0.02 14.8 0.3 0.022 14.6 0.3 1.2 1 0 0 1 1 1 0 PRMT5 oligomerisation domain Clc-like PF07062.12 NODE_62442_length_260_cov_112.026667_g54501_i0reverse_frame_2 - 0.021 14.3 3.8 0.023 14.2 3.8 1.1 1 0 0 1 1 1 0 Clc-like TPR_9 PF13371.6 NODE_62440_length_260_cov_122.835556_g54499_i0reverse_frame_2 - 0.08 13.1 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Chaperone_III PF07824.12 NODE_62440_length_260_cov_122.835556_g54499_i0forward_frame_3 - 0.025 14.8 0.0 0.029 14.6 0.0 1.1 1 0 0 1 1 1 0 Type III secretion chaperone domain TRL PF13146.6 NODE_62439_length_260_cov_130.151111_g54498_i0forward_frame_2 - 0.094 13.0 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 TRL-like protein family Mpv17_PMP22 PF04117.12 NODE_62438_length_260_cov_132.573333_g54497_i0reverse_frame_2 - 1e-08 35.3 0.0 1.5e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 Mpv17 / PMP22 family NCE101 PF11654.8 NODE_62436_length_260_cov_138.906667_g54495_i0forward_frame_3 - 0.093 12.5 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Non-classical export protein 1 Integrase_1 PF12835.7 NODE_62435_length_260_cov_139.853333_g54494_i0reverse_frame_3 - 0.005 16.9 0.1 0.005 16.9 0.1 1.2 1 0 0 1 1 1 1 Integrase Rota_Capsid_VP6 PF00980.17 NODE_62434_length_260_cov_190.937778_g54493_i0reverse_frame_3 - 0.15 11.0 0.1 0.15 10.9 0.1 1.0 1 0 0 1 1 1 0 Rotavirus major capsid protein VP6 zf-CDGSH PF09360.10 NODE_62431_length_260_cov_225.062222_g54490_i0reverse_frame_2 - 0.0079 16.4 0.3 0.0079 16.4 0.3 1.8 2 1 0 2 2 2 1 Iron-binding zinc finger CDGSH type VitD-bind_III PF09164.10 NODE_62430_length_260_cov_240.777778_g54489_i0forward_frame_2 - 0.0018 18.3 0.2 0.0024 17.8 0.2 1.2 1 0 0 1 1 1 1 Vitamin D binding protein, domain III DUF1182 PF06681.13 NODE_62428_length_260_cov_343.244444_g54488_i0reverse_frame_2 - 0.055 13.1 0.2 0.063 12.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1182) WH2 PF02205.20 NODE_62427_length_260_cov_428.786667_g54487_i0reverse_frame_2 - 0.056 13.3 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 WH2 motif Fer4_6 PF12837.7 NODE_62427_length_260_cov_428.786667_g54487_i0reverse_frame_2 - 5.3 7.3 7.9 0.3 11.2 0.9 2.3 3 0 0 3 3 3 0 4Fe-4S binding domain IMS_HHH PF11798.8 NODE_62424_length_260_cov_976.804444_g54484_i0reverse_frame_2 - 0.056 13.8 0.1 0.55 10.7 0.0 2.0 1 1 1 2 2 2 0 IMS family HHH motif TSGP1 PF07771.11 NODE_62422_length_260_cov_2816.097778_g54482_i0forward_frame_2 - 0.00064 19.9 0.2 0.00072 19.7 0.2 1.1 1 0 0 1 1 1 1 Tick salivary peptide group 1 TSGP1 PF07771.11 NODE_62421_length_260_cov_2816.173333_g54481_i0reverse_frame_2 - 0.014 15.5 0.1 0.016 15.3 0.1 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 DUF4834 PF16118.5 NODE_62415_length_261_cov_1.061947_g54475_i0reverse_frame_2 - 0.0019 19.1 0.0 0.0025 18.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) TssO PF17561.2 NODE_62415_length_261_cov_1.061947_g54475_i0reverse_frame_2 - 0.026 14.6 0.1 0.029 14.5 0.1 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO Connexin PF00029.19 NODE_62415_length_261_cov_1.061947_g54475_i0reverse_frame_2 - 0.03 14.1 0.0 0.033 13.9 0.0 1.0 1 0 0 1 1 1 0 Connexin C12orf66_like PF09404.10 NODE_62414_length_261_cov_1.061947_g54474_i0forward_frame_3 - 0.039 12.8 6.5 0.042 12.7 6.5 1.0 1 0 0 1 1 1 0 KICSTOR complex C12orf66 like Autophagy_C PF10381.9 NODE_62414_length_261_cov_1.061947_g54474_i0forward_frame_3 - 4.2 7.0 8.3 14 5.3 0.1 4.3 4 0 0 4 4 4 0 Autophagocytosis associated protein C-terminal DUF2512 PF10710.9 NODE_62414_length_261_cov_1.061947_g54474_i0forward_frame_3 - 7.6 6.2 7.8 6.1 6.5 1.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2512) DUF2644 PF10841.8 NODE_62411_length_261_cov_1.207965_g54471_i0reverse_frame_3 - 0.69 10.2 3.6 5.8 7.2 1.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2644) TTL PF03133.15 NODE_62408_length_261_cov_1.238938_g54468_i0reverse_frame_2 - 6.6e-10 38.6 0.1 8.7e-10 38.2 0.1 1.2 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family zf-CHY PF05495.12 NODE_62407_length_261_cov_1.238938_g54467_i0forward_frame_3 - 1.1e-12 48.2 24.5 1.5e-12 47.8 24.5 1.2 1 0 0 1 1 1 1 CHY zinc finger zf-BED PF02892.15 NODE_62407_length_261_cov_1.238938_g54467_i0forward_frame_3 - 0.92 9.6 20.7 0.41 10.7 0.8 3.0 1 1 2 3 3 3 0 BED zinc finger PRNT PF15174.6 NODE_62406_length_261_cov_1.252212_g54466_i0reverse_frame_3 - 0.074 13.1 0.1 7.4 6.7 0.0 2.2 2 0 0 2 2 2 0 Prion-related protein testis-specific V4R PF02830.18 NODE_62406_length_261_cov_1.252212_g54466_i0reverse_frame_2 - 0.054 13.5 0.1 0.078 13.0 0.1 1.2 1 0 0 1 1 1 0 V4R domain Retrotran_gag_2 PF14223.6 NODE_62405_length_261_cov_1.278761_g54465_i0forward_frame_2 - 0.055 13.1 0.1 0.07 12.8 0.1 1.2 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type UPF0052 PF01933.18 NODE_62404_length_261_cov_1.296460_g54464_i0reverse_frame_3 - 0.014 14.6 0.0 0.015 14.6 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0052 DUF1499 PF07386.11 NODE_62400_length_261_cov_1.367257_g54460_i0forward_frame_2 - 1.5e-09 38.4 0.0 1.8e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) SID PF11778.8 NODE_62399_length_261_cov_1.384956_g54459_i0forward_frame_2 - 0.064 13.4 0.4 0.082 13.0 0.4 1.1 1 0 0 1 1 1 0 Septation initiation SP_C-Propep PF08999.10 NODE_62399_length_261_cov_1.384956_g54459_i0forward_frame_2 - 0.11 12.2 1.6 0.15 11.8 1.6 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF1392 PF07154.11 NODE_62397_length_261_cov_1.398230_g54457_i0reverse_frame_3 - 0.013 15.6 0.0 0.017 15.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1392) DUF3335 PF11814.8 NODE_62394_length_261_cov_1.486726_g54454_i0reverse_frame_2 - 0.11 12.0 0.4 0.13 11.8 0.4 1.0 1 0 0 1 1 1 0 Peptidase_C39 like family DUF3810 PF12725.7 NODE_62393_length_261_cov_1.517699_g54453_i0reverse_frame_3 - 1 8.6 4.8 1 8.6 4.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Rh5 PF18515.1 NODE_62393_length_261_cov_1.517699_g54453_i0forward_frame_2 - 0.029 13.7 5.4 0.031 13.6 5.4 1.0 1 0 0 1 1 1 0 Rh5 coiled-coil domain DUF4549 PF15082.6 NODE_62386_length_261_cov_1.588496_g54446_i0forward_frame_2 - 0.33 10.7 4.0 2.9 7.7 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4549) BT1 PF03092.16 NODE_62381_length_261_cov_1.628319_g54441_i0forward_frame_3 - 0.0037 15.6 0.0 0.0045 15.3 0.0 1.2 1 0 0 1 1 1 1 BT1 family MFS_1 PF07690.16 NODE_62379_length_261_cov_1.690265_g54439_i0forward_frame_3 - 0.00016 20.7 1.8 0.00017 20.7 1.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1672 PF07901.11 NODE_62376_length_261_cov_1.712389_g54436_i0forward_frame_2 - 0.18 11.1 0.0 0.21 10.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1672) Arcadin_1 PF18653.1 NODE_62372_length_261_cov_1.827434_g54432_i0reverse_frame_2 - 0.078 13.1 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 Arcadin 1 DUF1609 PF07753.11 NODE_62369_length_261_cov_1.862832_g54429_i0reverse_frame_3 - 0.088 12.3 0.0 7.8 6.0 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1609) Herpes_UL95 PF03038.14 NODE_62367_length_261_cov_1.889381_g54427_i0forward_frame_3 - 0.089 11.9 0.3 0.091 11.9 0.3 1.1 1 0 0 1 1 1 0 UL95 family Alpha-amylase PF00128.24 NODE_62366_length_261_cov_1.929204_g54426_i0forward_frame_3 - 2.1e-05 24.3 2.0 0.00024 20.8 2.0 1.9 1 1 0 1 1 1 1 Alpha amylase, catalytic domain PALP PF00291.25 NODE_62363_length_261_cov_1.969027_g54423_i0reverse_frame_3 - 1.5e-07 31.1 0.0 1.9e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF2951 PF11166.8 NODE_62359_length_261_cov_2.044248_g54419_i0reverse_frame_3 - 0.12 12.6 1.5 0.14 12.4 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) YMF19 PF02326.15 NODE_62359_length_261_cov_2.044248_g54419_i0forward_frame_2 - 1.4 9.8 7.7 2 9.3 7.5 1.4 1 1 0 1 1 1 0 Plant ATP synthase F0 Cbl_N2 PF02761.14 NODE_62357_length_261_cov_2.123894_g54417_i0forward_frame_3 - 0.021 15.5 0.1 0.028 15.1 0.1 1.3 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, EF hand-like domain Colicin_V PF02674.16 NODE_62356_length_261_cov_2.123894_g54416_i0reverse_frame_3 - 0.0054 16.7 0.1 0.0063 16.5 0.1 1.1 1 0 0 1 1 1 1 Colicin V production protein ERGIC_N PF13850.6 NODE_62356_length_261_cov_2.123894_g54416_i0reverse_frame_3 - 0.071 13.5 0.4 0.09 13.1 0.4 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4083 PF13314.6 NODE_62356_length_261_cov_2.123894_g54416_i0reverse_frame_3 - 0.085 12.8 2.7 0.11 12.5 2.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Orf78 PF06024.12 NODE_62356_length_261_cov_2.123894_g54416_i0reverse_frame_3 - 0.2 12.0 0.7 0.25 11.7 0.7 1.2 1 0 0 1 1 1 0 Orf78 (ac78) Zip PF02535.22 NODE_62356_length_261_cov_2.123894_g54416_i0reverse_frame_3 - 0.36 10.0 2.0 0.41 9.8 2.0 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF5416 PF17437.2 NODE_62356_length_261_cov_2.123894_g54416_i0forward_frame_3 - 0.15 11.9 0.1 0.16 11.7 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5416) ANTH PF07651.16 NODE_62353_length_261_cov_2.181416_g54413_i0reverse_frame_2 - 0.0016 17.5 0.2 0.0018 17.4 0.2 1.0 1 0 0 1 1 1 1 ANTH domain Glutaredoxin PF00462.24 NODE_62353_length_261_cov_2.181416_g54413_i0forward_frame_3 - 5.2e-07 29.8 0.0 7.5e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin Fer4_14 PF13394.6 NODE_62353_length_261_cov_2.181416_g54413_i0forward_frame_3 - 0.15 12.2 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S single cluster domain Notch PF00066.17 NODE_62352_length_261_cov_2.194690_g54412_i0reverse_frame_2 - 0.081 13.4 1.8 0.081 13.4 1.8 1.8 2 0 0 2 2 2 0 LNR domain Suppressor_P21 PF11479.8 NODE_62348_length_261_cov_2.283186_g54408_i0forward_frame_3 - 0.032 14.4 0.3 0.041 14.1 0.3 1.4 1 1 0 1 1 1 0 RNA silencing suppressor P21 C-terminal domain RdRP PF05183.12 NODE_62344_length_261_cov_2.327434_g54404_i0forward_frame_3 - 2.5e-14 52.9 0.0 2.6e-14 52.8 0.0 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase Actin PF00022.19 NODE_62343_length_261_cov_2.331858_g54403_i0reverse_frame_2 - 2.4e-18 65.9 0.0 3.4e-18 65.5 0.0 1.3 1 1 0 1 1 1 1 Actin ERGIC_N PF13850.6 NODE_62332_length_261_cov_2.601770_g54392_i0forward_frame_3 - 0.0022 18.3 0.1 0.0026 18.1 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Herpes_LMP1 PF05297.11 NODE_62329_length_261_cov_2.623894_g54389_i0forward_frame_3 - 3.8 6.6 7.7 4.2 6.5 7.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Ku_C PF03730.14 NODE_62325_length_261_cov_2.663717_g54385_i0forward_frame_2 - 0.039 14.7 1.8 0.16 12.7 0.1 2.0 1 1 1 2 2 2 0 Ku70/Ku80 C-terminal arm LAGLIDADG_1 PF00961.19 NODE_62323_length_261_cov_2.690265_g54383_i0reverse_frame_3 - 0.021 15.8 0.9 0.022 15.7 0.9 1.1 1 0 0 1 1 1 0 LAGLIDADG endonuclease Kinesin PF00225.23 NODE_62323_length_261_cov_2.690265_g54383_i0reverse_frame_2 - 2e-22 79.6 0.0 2.1e-22 79.5 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_62323_length_261_cov_2.690265_g54383_i0reverse_frame_2 - 8.2e-12 45.3 0.0 1e-11 45.0 0.0 1.1 1 0 0 1 1 1 1 Microtubule binding SUR7 PF06687.12 NODE_62321_length_261_cov_2.699115_g54381_i0reverse_frame_2 - 0.2 11.3 7.7 0.24 11.0 7.7 1.2 1 0 0 1 1 1 0 SUR7/PalI family DUF5472 PF17566.2 NODE_62314_length_261_cov_2.946903_g54374_i0reverse_frame_3 - 0.016 15.1 0.2 0.023 14.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) UBM PF14377.6 NODE_62310_length_261_cov_3.194690_g54370_i0reverse_frame_3 - 0.0027 17.1 0.0 0.0037 16.6 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin binding region BDHCT PF08072.11 NODE_62310_length_261_cov_3.194690_g54370_i0forward_frame_2 - 0.036 14.2 0.0 0.089 12.9 0.0 1.6 1 0 0 1 1 1 0 BDHCT (NUC031) domain FKS1_dom1 PF14288.6 NODE_62310_length_261_cov_3.194690_g54370_i0forward_frame_2 - 0.19 12.0 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 Integrase_Zn PF02022.19 NODE_62309_length_261_cov_3.283186_g54369_i0reverse_frame_2 - 0.12 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Integrase Zinc binding domain Mucin PF01456.17 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_3 - 1.4 9.0 14.7 1.5 8.8 14.7 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein CPSF100_C PF13299.6 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_3 - 2 8.6 9.4 2.1 8.5 9.4 1.1 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal RPN2_C PF18004.1 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_2 - 0.025 14.5 18.1 0.027 14.4 18.1 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain CobT PF06213.12 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_2 - 6.6 6.0 28.2 6.9 6.0 28.2 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT R_equi_Vir PF05526.11 NODE_62308_length_261_cov_3.314159_g54368_i0reverse_frame_2 - 7.6 6.3 8.2 8.3 6.2 8.2 1.2 1 0 0 1 1 1 0 Rhodococcus equi virulence-associated protein ABC2_membrane_3 PF12698.7 NODE_62307_length_261_cov_3.508850_g54367_i0forward_frame_2 - 5.3e-13 48.8 2.8 5.8e-13 48.7 2.8 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein Mem_trans PF03547.18 NODE_62307_length_261_cov_3.508850_g54367_i0forward_frame_2 - 0.064 11.6 1.0 0.064 11.6 1.0 1.3 1 1 0 1 1 1 0 Membrane transport protein Fusion_F0 PF13044.6 NODE_62305_length_261_cov_3.628319_g54365_i0forward_frame_2 - 0.02 13.5 1.6 0.024 13.3 1.6 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0, Isavirus IgaA PF07095.11 NODE_62303_length_261_cov_3.942478_g54363_i0forward_frame_3 - 0.038 12.0 0.4 0.044 11.8 0.4 1.0 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA Zn_protease PF05618.11 NODE_62302_length_261_cov_5.920354_g54362_i0reverse_frame_2 - 0.004 17.0 0.1 0.0044 16.9 0.1 1.1 1 0 0 1 1 1 1 Putative ATP-dependant zinc protease YitT_membrane PF02588.15 NODE_62300_length_261_cov_32.393805_g54360_i0forward_frame_3 - 0.035 13.5 0.2 0.044 13.1 0.2 1.0 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Peptidase_C1 PF00112.23 NODE_62300_length_261_cov_32.393805_g54360_i0forward_frame_2 - 5.1e-11 43.1 2.4 5.9e-11 42.9 2.4 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_62300_length_261_cov_32.393805_g54360_i0forward_frame_2 - 0.00048 19.0 0.9 0.00063 18.6 0.9 1.1 1 0 0 1 1 1 1 Peptidase C1-like family TPR_MLP1_2 PF07926.12 NODE_62299_length_261_cov_34.438053_g54359_i0reverse_frame_3 - 0.00065 19.8 9.3 0.00088 19.3 9.3 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein CCDC85 PF10226.9 NODE_62299_length_261_cov_34.438053_g54359_i0reverse_frame_3 - 0.11 12.2 5.4 0.13 11.9 5.4 1.1 1 0 0 1 1 1 0 CCDC85 family OrfA PF17495.2 NODE_62298_length_261_cov_37.256637_g54358_i0forward_frame_2 - 0.014 15.6 0.1 0.017 15.3 0.1 1.1 1 0 0 1 1 1 0 Vpr-like OrfA Ank_5 PF13857.6 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 0.0037 17.5 0.0 0.0054 17.0 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 0.015 15.7 0.4 0.033 14.6 0.0 1.7 2 0 0 2 2 2 0 Ankyrin repeat Ank_2 PF12796.7 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 0.029 14.9 0.0 0.068 13.8 0.0 1.3 1 1 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 0.058 14.0 0.0 0.14 12.8 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeat DUF4266 PF14086.6 NODE_62297_length_261_cov_40.358407_g54357_i0forward_frame_3 - 5.5 8.0 8.7 13 6.8 8.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4266) SWIRM-assoc_2 PF16496.5 NODE_62292_length_261_cov_44.646018_g54352_i0reverse_frame_3 - 1.6 7.5 3.2 1.8 7.4 3.2 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal YajC PF02699.15 NODE_62289_length_261_cov_48.141593_g54349_i0forward_frame_3 - 0.21 11.5 2.0 0.34 10.8 0.2 1.9 2 0 0 2 2 2 0 Preprotein translocase subunit Renin_r PF07850.14 NODE_62289_length_261_cov_48.141593_g54349_i0forward_frame_2 - 0.006 17.1 0.1 0.0069 17.0 0.1 1.2 1 0 0 1 1 1 1 Renin receptor-like protein Aa_trans PF01490.18 NODE_62289_length_261_cov_48.141593_g54349_i0forward_frame_2 - 0.046 12.4 0.1 0.056 12.1 0.1 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Adeno_E3_15_3 PF03307.14 NODE_62288_length_261_cov_48.867257_g54348_i0reverse_frame_2 - 0.044 13.7 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region Myb_DNA-binding PF00249.31 NODE_62286_length_261_cov_52.557522_g54346_i0forward_frame_3 - 2.7e-09 37.1 0.0 3.4e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_62286_length_261_cov_52.557522_g54346_i0forward_frame_3 - 9.3e-05 22.6 0.0 0.00012 22.2 0.0 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain UPF1_Zn_bind PF09416.10 NODE_62283_length_261_cov_56.101770_g54343_i0reverse_frame_3 - 0.0034 17.4 1.2 0.0036 17.3 1.2 1.1 1 0 0 1 1 1 1 RNA helicase (UPF2 interacting domain) SPACA7 PF15307.6 NODE_62283_length_261_cov_56.101770_g54343_i0reverse_frame_2 - 0.086 13.1 0.7 0.093 13.0 0.7 1.0 1 0 0 1 1 1 0 Sperm acrosome-associated protein 7 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks312.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks312.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks312.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks312.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4122 PF13498.6 NODE_62279_length_261_cov_60.977876_g54339_i0forward_frame_3 - 0.22 11.2 3.0 0.25 11.0 3.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4122) DUF2117 PF09890.9 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_3 - 0.039 13.4 0.4 0.044 13.3 0.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2117) GerPC PF10737.9 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_2 - 0.0036 17.4 2.8 0.0041 17.2 2.8 1.1 1 0 0 1 1 1 1 Spore germination protein GerPC DUF1690 PF07956.11 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_2 - 0.01 16.3 5.9 0.012 16.0 5.9 1.2 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) DUF883 PF05957.13 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_2 - 0.095 13.3 0.9 0.12 13.0 0.9 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) DMPK_coil PF08826.10 NODE_62278_length_261_cov_61.371681_g54338_i0reverse_frame_2 - 0.13 12.4 4.2 0.31 11.2 1.7 2.1 1 1 1 2 2 2 0 DMPK coiled coil domain like DsbB PF02600.16 NODE_62275_length_261_cov_67.477876_g54335_i0forward_frame_2 - 0.032 14.7 0.2 0.034 14.6 0.2 1.2 1 0 0 1 1 1 0 Disulfide bond formation protein DsbB FoP_duplication PF13865.6 NODE_62274_length_261_cov_71.761062_g54334_i0reverse_frame_2 - 2.4 8.7 9.3 3.5 8.2 4.4 2.1 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 SSI PF00720.17 NODE_62273_length_261_cov_77.084071_g54333_i0forward_frame_3 - 0.076 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Subtilisin inhibitor-like Carb_bind PF10645.9 NODE_62273_length_261_cov_77.084071_g54333_i0forward_frame_2 - 0.062 13.5 0.3 0.11 12.8 0.3 1.4 1 0 0 1 1 1 0 Carbohydrate binding Ribosomal_L37e PF01907.19 NODE_62272_length_261_cov_84.460177_g54332_i0forward_frame_2 - 0.085 13.0 7.4 0.044 13.9 5.8 1.5 1 1 0 1 1 1 0 Ribosomal protein L37e Asp4 PF16996.5 NODE_62270_length_261_cov_90.101770_g54330_i0forward_frame_3 - 0.12 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ribosomal_L2 PF00181.23 NODE_62268_length_261_cov_94.261062_g54328_i0forward_frame_2 - 0.023 14.6 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal Proteins L2, RNA binding domain Msg2_C PF12373.8 NODE_62266_length_261_cov_107.641593_g54326_i0reverse_frame_2 - 0.21 11.0 0.1 0.36 10.3 0.1 1.4 1 0 0 1 1 1 0 Major surface glycoprotein 2 C terminal Chordopox_L2 PF05803.12 NODE_62266_length_261_cov_107.641593_g54326_i0reverse_frame_2 - 0.27 11.1 10.3 0.38 10.6 10.3 1.3 1 0 0 1 1 1 0 Chordopoxvirus L2 protein MORN PF02493.20 NODE_62266_length_261_cov_107.641593_g54326_i0forward_frame_3 - 1.2e-05 24.9 19.8 9e-05 22.1 1.7 4.5 4 1 0 4 4 4 3 MORN repeat Hypoth_Ymh PF09509.10 NODE_62265_length_261_cov_109.818584_g54325_i0reverse_frame_3 - 0.0094 15.8 0.0 0.011 15.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (Hypoth_ymh) Copper-fist PF00649.18 NODE_62264_length_261_cov_111.703540_g54324_i0forward_frame_3 - 0.025 14.1 1.4 0.044 13.3 1.4 1.4 1 0 0 1 1 1 0 Copper fist DNA binding domain NBD_C PF17042.5 NODE_62263_length_261_cov_114.960177_g54323_i0forward_frame_2 - 0.17 12.4 0.0 0.19 12.2 0.0 1.1 1 0 0 1 1 1 0 Nucleotide-binding C-terminal domain DUF3145 PF11343.8 NODE_62261_length_261_cov_119.845133_g54321_i0reverse_frame_3 - 0.037 13.6 0.0 0.042 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3145) Trp_leader2 PF08056.11 NODE_62261_length_261_cov_119.845133_g54321_i0forward_frame_3 - 0.099 12.6 2.5 0.15 12.1 2.5 1.2 1 0 0 1 1 1 0 Tryptophan operon leader peptide RD3 PF14473.6 NODE_62260_length_261_cov_121.938053_g54320_i0forward_frame_2 - 0.084 12.7 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 RD3 protein DUF1106 PF06523.11 NODE_62257_length_261_cov_162.867257_g54317_i0forward_frame_2 - 0.085 12.9 0.1 0.12 12.5 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1106) DDE_3 PF13358.6 NODE_62252_length_261_cov_236.973451_g54312_i0forward_frame_3 - 0.097 12.4 0.1 0.24 11.2 0.0 1.6 2 0 0 2 2 2 0 DDE superfamily endonuclease GCP5-Mod21 PF14609.6 NODE_62251_length_261_cov_239.389381_g54311_i0forward_frame_3 - 0.04 12.3 0.0 0.048 12.0 0.0 1.0 1 0 0 1 1 1 0 gamma-Tubulin ring complex non-core subunit mod21 AP3D1 PF06375.11 NODE_62249_length_261_cov_299.362832_g54309_i0reverse_frame_3 - 0.043 14.1 5.1 0.038 14.2 5.1 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF3915 PF13054.6 NODE_62249_length_261_cov_299.362832_g54309_i0reverse_frame_3 - 0.3 11.1 3.0 12 5.9 3.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3915) DUF4710 PF15828.5 NODE_62249_length_261_cov_299.362832_g54309_i0reverse_frame_3 - 3.7 7.7 16.6 5.1 7.3 16.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) SR-25 PF10500.9 NODE_62249_length_261_cov_299.362832_g54309_i0reverse_frame_3 - 9.7 5.7 16.4 12 5.4 16.4 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein ETRAMP PF09716.10 NODE_62245_length_261_cov_392.774336_g54305_i0forward_frame_2 - 1.1 9.4 3.3 0.56 10.3 0.2 1.9 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) GDP_Man_Dehyd PF16363.5 NODE_62243_length_261_cov_1108.991150_g54303_i0reverse_frame_2 - 9.3e-06 25.3 0.1 1e-05 25.2 0.1 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_62243_length_261_cov_1108.991150_g54303_i0reverse_frame_2 - 0.00024 20.6 0.0 0.00028 20.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family FeoB_Cyto PF17910.1 NODE_62243_length_261_cov_1108.991150_g54303_i0reverse_frame_2 - 0.017 15.7 0.0 0.021 15.4 0.0 1.2 1 0 0 1 1 1 0 FeoB cytosolic helical domain NAD_binding_4 PF07993.12 NODE_62243_length_261_cov_1108.991150_g54303_i0reverse_frame_2 - 0.031 13.5 0.0 0.036 13.2 0.0 1.1 1 0 0 1 1 1 0 Male sterility protein RE_Eco29kI PF09517.10 ORF98999 - 0.044 13.4 0.8 0.049 13.3 0.8 1.2 1 0 0 1 1 1 0 Eco29kI restriction endonuclease DUF5564 PF17719.1 ORF98999 - 0.054 13.6 3.8 0.065 13.4 3.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5564) Dynein_light PF01221.18 ORF98425 - 7.9e-27 93.4 0.1 8.8e-27 93.3 0.1 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 DUF639 PF04842.12 ORF98391 - 0.0096 15.4 0.7 0.0096 15.4 0.7 1.0 1 0 0 1 1 1 1 Plant protein of unknown function (DUF639) HR_lesion PF05514.11 ORF98391 - 0.069 13.3 0.2 0.078 13.2 0.2 1.1 1 0 0 1 1 1 0 HR-like lesion-inducing Cbl_N2 PF02761.14 ORF98256 - 0.025 15.3 1.2 0.034 14.9 1.2 1.1 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, EF hand-like domain KRBA1 PF15287.6 ORF98180 - 0.16 11.7 0.8 0.33 10.7 0.1 1.9 2 0 0 2 2 2 0 KRBA1 family repeat Peptidase_S55 PF05580.12 ORF97666 - 0.053 13.5 0.0 0.061 13.3 0.0 1.1 1 0 0 1 1 1 0 SpoIVB peptidase S55 DUF4260 PF14079.6 ORF97415 - 0.067 13.1 0.5 0.082 12.9 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4260) NS3_envE PF02723.14 ORF97415 - 0.1 12.7 4.5 0.055 13.5 2.6 1.6 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E BACK PF07707.15 ORF96443 - 0.00033 20.7 0.5 0.005 16.9 0.1 2.0 1 1 1 2 2 2 1 BTB And C-terminal Kelch BTB PF00651.31 ORF96443 - 0.031 14.5 0.2 0.14 12.4 0.1 2.0 1 1 1 2 2 2 0 BTB/POZ domain Adeno_E4_34 PF04528.13 ORF95704 - 0.06 13.2 0.2 0.072 12.9 0.2 1.1 1 0 0 1 1 1 0 Adenovirus early E4 34 kDa protein conserved region ToxS PF17323.2 ORF93953 - 0.1 12.2 0.1 9.4 5.9 0.1 2.0 1 1 1 2 2 2 0 Trans-membrane regulatory protein ToxS TBP PF00352.21 ORF93797 - 0.02 14.9 0.0 0.025 14.5 0.0 1.2 1 0 0 1 1 1 0 Transcription factor TFIID (or TATA-binding protein, TBP) E1_UFD PF09358.10 ORF93797 - 0.12 13.1 0.0 0.13 13.0 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin fold domain MtN3_slv PF03083.16 ORF91628 - 0.042 13.9 1.3 1.2 9.2 0.2 2.1 1 1 1 2 2 2 0 Sugar efflux transporter for intercellular exchange DUF4265 PF14085.6 ORF9151 - 0.18 11.8 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4265) KLRAQ PF10205.9 ORF91388 - 0.057 13.7 0.0 0.081 13.2 0.0 1.2 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein Neuroparsin PF07327.11 ORF90067 - 0.0085 16.5 4.5 0.0097 16.3 4.5 1.1 1 0 0 1 1 1 1 Neuroparsin SCRG1 PF15224.6 ORF90067 - 0.16 12.1 6.2 0.065 13.4 4.0 1.5 2 0 0 2 2 2 0 Scrapie-responsive protein 1 COP-gamma_platf PF08752.10 ORF9002 - 1.4e-07 31.7 0.0 1.9e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Coatomer gamma subunit appendage platform subdomain DUF1856 PF08983.10 ORF89904 - 0.79 10.0 10.0 0.16 12.2 6.3 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF1856) Nucleocapsid-N PF11030.8 ORF8868 - 0.075 13.0 0.0 0.091 12.7 0.0 1.1 1 0 0 1 1 1 0 Nucleocapsid protein N CKS PF01111.19 ORF88383 - 2.8e-36 123.6 1.7 3.2e-36 123.4 1.7 1.0 1 0 0 1 1 1 1 Cyclin-dependent kinase regulatory subunit MucBP_2 PF17965.1 ORF8819 - 0.022 15.3 0.3 0.027 15.0 0.3 1.2 1 0 0 1 1 1 0 Mucin binding domain Pcc1 PF09341.10 ORF87792 - 1.7e-12 47.3 0.1 1.9e-12 47.1 0.1 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF4424 PF14415.6 ORF87792 - 0.025 13.9 0.1 0.027 13.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4424) PdaC PF13739.6 ORF87792 - 0.038 15.0 0.6 0.046 14.7 0.6 1.3 1 0 0 1 1 1 0 Deacetylase PdaC DUF3379 PF11859.8 ORF87792 - 0.067 12.5 0.2 0.069 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) zf-H2C2 PF09337.10 ORF87309 - 0.086 13.1 0.3 0.2 11.9 0.3 1.6 1 0 0 1 1 1 0 H2C2 zinc finger His_Me_b4a2 PF18275.1 ORF87286 - 0.38 10.9 3.5 0.73 10.0 3.5 1.4 1 0 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain DUF2207 PF09972.9 ORF8707 - 9.1 4.9 5.6 8 5.1 5.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ATP-synt_8 PF00895.20 ORF86687 - 1.1 9.8 7.7 0.74 10.3 1.3 2.2 1 1 1 2 2 2 0 ATP synthase protein 8 dUTPase PF00692.19 ORF86497 - 6.7e-31 106.7 0.0 7.3e-31 106.5 0.0 1.0 1 0 0 1 1 1 1 dUTPase Herpes_ORF11 PF04797.13 ORF86497 - 0.18 10.6 0.0 0.2 10.4 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus dUTPase protein Imm31 PF15591.6 ORF86377 - 0.14 12.0 1.5 0.24 11.3 1.5 1.3 1 0 0 1 1 1 0 Immunity protein 31 CdiI_4 PF18624.1 ORF86084 - 0.063 13.8 0.0 0.074 13.5 0.0 1.1 1 0 0 1 1 1 0 CDI immunity protein Ribosomal_S4e PF00900.20 ORF85622 - 0.027 14.4 0.0 0.032 14.1 0.0 1.1 1 0 0 1 1 1 0 Ribosomal family S4e DUF2981 PF11200.8 ORF83860 - 0.57 9.9 2.1 0.56 9.9 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) KLRAQ PF10205.9 ORF83817 - 0.057 13.7 0.0 0.081 13.2 0.0 1.2 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein DUF5547 PF17701.1 ORF83209 - 0.028 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Snurportin1 PF11538.8 ORF83209 - 0.052 13.7 2.2 0.052 13.7 2.2 1.6 2 0 0 2 2 2 0 Snurportin1 T2SS_PulS_OutS PF09691.10 ORF82928 - 0.048 13.8 0.0 0.055 13.6 0.0 1.2 1 0 0 1 1 1 0 Type II secretion system pilotin lipoprotein (PulS_OutS) DUF5407 PF17401.2 ORF82835 - 0.0039 17.4 0.1 0.007 16.6 0.1 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5407) OAF PF14941.6 ORF82486 - 0.028 13.9 1.9 0.028 13.9 1.9 1.1 1 0 0 1 1 1 0 Transcriptional regulator, Out at first WBP-1 PF11669.8 ORF82096 - 0.025 15.2 5.9 0.03 15.0 5.9 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 UCH_C PF18031.1 ORF81282 - 0.03 14.2 1.4 0.03 14.2 1.4 1.8 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolases Dynamin_N PF00350.23 ORF80594 - 4.8e-10 39.7 0.5 7.3e-10 39.2 0.5 1.3 1 0 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.23 ORF80594 - 0.039 14.0 0.1 0.061 13.4 0.1 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase ABC_tran PF00005.27 ORF80594 - 0.082 13.4 0.1 0.14 12.7 0.0 1.3 1 1 0 1 1 1 0 ABC transporter Dor1 PF04124.12 ORF80258 - 0.22 10.2 4.1 0.048 12.3 1.0 1.5 2 0 0 2 2 2 0 Dor1-like family DUF2981 PF11200.8 ORF7936 - 0.57 9.9 2.1 0.56 9.9 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) ELMO_CED12 PF04727.13 ORF7915 - 0.82 9.8 3.6 0.95 9.5 3.6 1.1 1 0 0 1 1 1 0 ELMO/CED-12 family DUF4227 PF14004.6 ORF78501 - 6.3 6.9 8.5 0.27 11.2 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4227) APOBEC_N PF08210.11 ORF78286 - 0.19 11.6 1.4 0.21 11.5 1.4 1.1 1 0 0 1 1 1 0 APOBEC-like N-terminal domain DSHCT PF08148.12 ORF76796 - 1e-12 48.1 0.1 1.2e-12 47.8 0.1 1.1 1 0 0 1 1 1 1 DSHCT (NUC185) domain Adeno_E4_34 PF04528.13 ORF75977 - 0.06 13.2 0.2 0.072 12.9 0.2 1.1 1 0 0 1 1 1 0 Adenovirus early E4 34 kDa protein conserved region muHD PF10291.9 ORF75904 - 0.017 14.5 0.0 0.02 14.3 0.0 1.0 1 0 0 1 1 1 0 Muniscin C-terminal mu homology domain Glyco_hydro81C PF17652.1 ORF75747 - 0.056 12.7 0.0 0.059 12.6 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 81 C-terminal domain KLRAQ PF10205.9 ORF75657 - 0.057 13.7 0.0 0.081 13.2 0.0 1.2 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein NCOA_u2 PF16665.5 ORF75109 - 0.047 14.0 1.0 0.065 13.5 1.0 1.2 1 0 0 1 1 1 0 Unstructured region on nuclear receptor coactivator protein Lipoxygenase PF00305.19 ORF74775 - 0.24 9.8 0.0 0.24 9.7 0.0 1.0 1 0 0 1 1 1 0 Lipoxygenase Epiglycanin_TR PF05647.11 ORF73468 - 0.34 10.8 11.1 0.48 10.4 11.1 1.2 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like CDH-cyt PF16010.5 ORF72757 - 0.071 12.8 0.9 0.081 12.6 0.9 1.1 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase Sugarporin_N PF11471.8 ORF72333 - 0.0031 17.4 0.1 0.051 13.5 0.1 2.2 2 0 0 2 2 2 1 Maltoporin periplasmic N-terminal extension HU-CCDC81_bac_2 PF18175.1 ORF72333 - 0.021 14.7 0.1 0.048 13.5 0.1 1.6 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 LPD1 PF18796.1 ORF72333 - 0.066 13.3 0.1 0.078 13.1 0.1 1.2 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 1 MinE PF03776.14 ORF72333 - 0.12 12.4 0.5 0.72 9.9 0.1 2.0 2 0 0 2 2 2 0 Septum formation topological specificity factor MinE CAP-ZIP_m PF15255.6 ORF71507 - 0.024 14.9 0.1 0.038 14.2 0.0 1.4 1 1 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region YtpI PF14007.6 ORF71507 - 0.059 13.5 0.1 0.093 12.9 0.1 1.4 1 0 0 1 1 1 0 YtpI-like protein Vps54 PF07928.12 ORF7127 - 3.4 8.1 6.9 2.7 8.5 4.7 1.7 1 1 1 2 2 2 0 Vps54-like protein DUF2151 PF10221.9 ORF70615 - 0.036 12.7 0.2 0.041 12.5 0.2 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator Arf PF00025.21 ORF69760 - 2.2e-17 63.0 0.0 2.6e-17 62.8 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family DUF2628 PF10947.8 ORF69121 - 0.11 12.9 0.8 0.15 12.5 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) UPF0242 PF06785.11 ORF69121 - 4.4 7.4 6.4 5.1 7.2 6.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus AWS PF17907.1 ORF69011 - 0.04 14.0 2.1 0.98 9.5 1.1 2.3 2 0 0 2 2 2 0 AWS domain Ureide_permease PF07168.11 ORF67842 - 4.7 5.9 4.5 5.1 5.7 4.5 1.0 1 0 0 1 1 1 0 Ureide permease Bunya_NS-S PF01104.17 ORF67428 - 0.023 14.5 3.4 0.088 12.6 1.6 2.0 1 1 1 2 2 2 0 Bunyavirus non-structural protein NS-s DUF1505 PF07403.11 ORF67428 - 0.059 13.6 0.4 0.066 13.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) Acetyltransf_13 PF13880.6 ORF67428 - 0.1 12.6 0.1 0.17 11.9 0.1 1.4 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase FGFR3_TM PF18123.1 ORF67141 - 3.5 7.2 9.4 2.6 7.6 0.5 2.4 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain SpmSyn_N PF17950.1 ORF67031 - 0.043 14.0 0.0 0.051 13.8 0.0 1.1 1 0 0 1 1 1 0 S-adenosylmethionine decarboxylase N -terminal 7TM_GPCR_Srv PF10323.9 ORF66848 - 0.016 14.5 0.6 0.019 14.3 0.6 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srv VASt PF16016.5 ORF66378 - 0.15 12.5 0.0 0.18 12.2 0.0 1.2 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain UPRTase PF14681.6 ORF65702 - 0.015 14.8 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase GFA PF04828.14 ORF65702 - 0.015 15.6 1.1 0.02 15.2 1.1 1.2 1 0 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme CooC_C PF15976.5 ORF65702 - 0.036 14.1 0.0 0.052 13.6 0.0 1.3 1 0 0 1 1 1 0 CS1-pili formation C-terminal DUF2723 PF11028.8 ORF65469 - 0.3 11.0 6.3 0.34 10.8 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) DUF5382 PF17354.2 ORF65392 - 0.023 13.5 0.2 0.025 13.4 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5382) GM_CSF PF01109.17 ORF65392 - 0.14 12.4 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 Granulocyte-macrophage colony-stimulating factor OAF PF14941.6 ORF63451 - 0.028 13.9 1.9 0.028 13.9 1.9 1.1 1 0 0 1 1 1 0 Transcriptional regulator, Out at first Lipoprotein_19 PF13617.6 ORF63251 - 0.094 12.5 0.5 0.14 11.9 0.5 1.3 1 0 0 1 1 1 0 YnbE-like lipoprotein Ad_cyc_g-alpha PF08509.11 ORF63243 - 0.089 12.5 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Adenylate cyclase G-alpha binding domain HTH_11 PF08279.12 ORF62527 - 0.13 12.3 0.1 0.19 11.7 0.1 1.2 1 0 0 1 1 1 0 HTH domain KRBA1 PF15287.6 ORF62395 - 0.16 11.7 0.8 0.33 10.7 0.1 1.9 2 0 0 2 2 2 0 KRBA1 family repeat HR1 PF02185.16 ORF6208 - 0.065 13.4 0.7 0.079 13.1 0.7 1.2 1 0 0 1 1 1 0 Hr1 repeat KIAA1430 PF13879.6 ORF61975 - 3.9e-11 43.6 9.3 5.3e-11 43.2 9.3 1.2 1 0 0 1 1 1 1 KIAA1430 homologue Ycf70 PF17382.2 ORF61546 - 0.25 11.8 0.2 0.25 11.8 0.2 1.9 1 1 2 3 3 3 0 Uncharacterized Ycf70-like Neuropep_like PF15161.6 ORF60473 - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Neuropeptide-like TA0956 PF11513.8 ORF5947 - 0.087 13.1 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Thermoplasma acidophilum protein TA0956 Pcc1 PF09341.10 ORF593 - 1.7e-12 47.3 0.1 1.9e-12 47.1 0.1 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF4424 PF14415.6 ORF593 - 0.025 13.9 0.1 0.027 13.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4424) PdaC PF13739.6 ORF593 - 0.038 15.0 0.6 0.046 14.7 0.6 1.3 1 0 0 1 1 1 0 Deacetylase PdaC DUF3379 PF11859.8 ORF593 - 0.067 12.5 0.2 0.069 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) CDPS PF16715.5 ORF5843 - 0.023 14.3 0.2 0.027 14.1 0.2 1.0 1 0 0 1 1 1 0 Cyclodipeptide synthase Mito_carr PF00153.27 ORF5759 - 0.0047 16.8 0.0 0.0051 16.7 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein RhlB PF12300.8 ORF57542 - 0.068 13.3 3.8 0.073 13.2 3.8 1.1 1 0 0 1 1 1 0 ATP-dependent RNA helicase RhlB Hum_adeno_E3A PF05393.11 ORF57471 - 5.4 7.1 8.4 2 8.4 3.2 1.9 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein Sfi1_C PF10638.9 ORF57439 - 0.082 13.7 1.2 0.093 13.5 1.2 1.1 1 0 0 1 1 1 0 Spindle body associated protein C-terminus UL17 PF17640.2 ORF57259 - 0.59 10.2 6.9 0.11 12.6 1.6 2.0 1 1 1 2 2 2 0 Uncharacterized UL17 EF-hand_8 PF13833.6 ORF56947 - 0.00051 19.8 0.7 0.023 14.6 0.1 2.6 2 1 1 3 3 3 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF56947 - 0.0011 19.3 0.4 0.0038 17.6 0.4 1.8 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF56947 - 0.0098 15.8 2.2 7.8 6.7 0.0 3.0 2 1 0 2 2 2 2 EF-hand domain UNC45-central PF11701.8 ORF56947 - 0.1 12.5 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Myosin-binding striated muscle assembly central Ion_trans PF00520.31 ORF56870 - 2.1 7.5 5.0 3.1 6.9 5.0 1.5 1 1 0 1 1 1 0 Ion transport protein DUF5547 PF17701.1 ORF56865 - 0.028 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Snurportin1 PF11538.8 ORF56865 - 0.052 13.7 2.2 0.052 13.7 2.2 1.6 2 0 0 2 2 2 0 Snurportin1 DUF678 PF05077.12 ORF56611 - 0.0037 17.4 1.2 0.01 16.0 0.5 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF678) RE_HpaII PF09561.10 ORF56389 - 0.035 13.5 0.1 0.035 13.5 0.1 1.1 1 0 0 1 1 1 0 HpaII restriction endonuclease C_tripleX PF02363.19 ORF56379 - 4.5 7.8 7.9 35 5.0 0.1 2.2 2 0 0 2 2 2 0 Cysteine rich repeat DnaJ_CXXCXGXG PF00684.19 ORF55838 - 0.0081 16.5 1.2 0.01 16.1 1.2 1.2 1 0 0 1 1 1 1 DnaJ central domain TspO_MBR PF03073.15 ORF55103 - 0.15 12.1 1.5 0.2 11.7 1.5 1.2 1 0 0 1 1 1 0 TspO/MBR family FGFR3_TM PF18123.1 ORF55103 - 0.42 10.2 6.6 3 7.5 0.8 3.0 2 1 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain CTD_bind PF04818.13 ORF54612 - 0.031 15.1 0.1 5.2 8.0 0.0 2.4 2 1 0 2 2 2 0 RNA polymerase II-binding domain. CmlA_N PF18456.1 ORF54612 - 0.057 12.7 0.0 0.065 12.5 0.0 1.1 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain Baculo_11_kDa PF06143.11 ORF54404 - 0.0026 17.3 4.0 0.0032 17.0 4.0 1.2 1 0 0 1 1 1 1 Baculovirus 11 kDa family DUF1189 PF06691.11 ORF54404 - 0.0081 15.7 2.5 0.0085 15.7 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1189) UL45 PF05473.12 ORF54404 - 0.089 12.4 3.3 0.098 12.3 3.3 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF4349 PF14257.6 ORF54404 - 0.28 10.6 0.9 0.34 10.3 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Use1 PF09753.9 ORF54404 - 1.1 8.9 2.5 1.2 8.8 2.5 1.1 1 0 0 1 1 1 0 Membrane fusion protein Use1 DUF1700 PF08006.11 ORF54404 - 1.4 8.5 10.6 1.5 8.4 10.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) CTU2 PF10288.9 ORF53773 - 0.0098 16.1 1.5 0.011 16.0 1.5 1.2 1 0 0 1 1 1 1 Cytoplasmic tRNA 2-thiolation protein 2 CDRT4 PF15213.6 ORF53773 - 0.037 14.6 0.8 0.039 14.6 0.8 1.1 1 0 0 1 1 1 0 CMT1A duplicated region transcript 4 protein CBP4 PF07960.11 ORF53773 - 0.065 13.1 2.2 0.1 12.4 2.2 1.5 1 1 0 1 1 1 0 CBP4 Bcl-2_BAD PF10514.9 ORF53669 - 0.00064 20.2 2.8 0.00074 20.0 2.8 1.1 1 0 0 1 1 1 1 Pro-apoptotic Bcl-2 protein, BAD ActA PF05058.12 ORF52762 - 0.059 11.7 0.5 0.061 11.7 0.5 1.0 1 0 0 1 1 1 0 ActA Protein UCH_C PF18031.1 ORF52211 - 0.03 14.2 1.4 0.03 14.2 1.4 1.8 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolases DUF523 PF04463.12 ORF50643 - 0.14 12.2 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF523) Prominin PF05478.11 ORF50307 - 4 5.3 4.0 4.6 5.1 4.0 1.0 1 0 0 1 1 1 0 Prominin UQ_con PF00179.26 ORF48758 - 3.8e-16 59.0 0.0 4.5e-16 58.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 ORF48758 - 0.022 15.1 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 RWD domain DUF4219 PF13961.6 ORF48758 - 0.039 13.6 0.0 0.061 13.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4219) DUF3261 PF11659.8 ORF46169 - 0.2 11.5 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3261) DUF5547 PF17701.1 ORF46002 - 0.028 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Snurportin1 PF11538.8 ORF46002 - 0.052 13.7 2.2 0.052 13.7 2.2 1.6 2 0 0 2 2 2 0 Snurportin1 DUF823 PF05689.11 ORF45967 - 0.057 13.2 0.7 0.079 12.7 0.1 1.5 1 1 1 2 2 2 0 Salmonella repeat of unknown function (DUF823) DUF3524 PF12038.8 ORF45578 - 0.0032 17.3 0.0 0.0037 17.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3524) Usp PF00582.26 ORF44940 - 5.4e-18 65.8 0.3 5.7e-18 65.8 0.3 1.0 1 0 0 1 1 1 1 Universal stress protein family UCR_UQCRX_QCR9 PF05365.12 ORF44655 - 2.7e-11 43.2 0.3 3.5e-11 42.9 0.3 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like PPR PF01535.20 ORF44655 - 0.031 14.5 0.1 0.049 13.9 0.1 1.3 1 0 0 1 1 1 0 PPR repeat ABC2_membrane_2 PF12679.7 ORF42854 - 0.14 11.5 4.9 0.14 11.5 4.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4207 PF13904.6 ORF42333 - 0.5 10.0 28.3 1.5 8.4 28.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4207) Rtt102p PF09510.10 ORF42333 - 1.6 9.0 12.2 2 8.6 12.2 1.2 1 0 0 1 1 1 0 Rtt102p-like transcription regulator protein DUF3437 PF11919.8 ORF42005 - 0.099 12.6 0.1 0.17 11.8 0.0 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3437) UCR_UQCRX_QCR9 PF05365.12 ORF4115 - 2.7e-11 43.2 0.3 3.5e-11 42.9 0.3 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like PPR PF01535.20 ORF4115 - 0.031 14.5 0.1 0.049 13.9 0.1 1.3 1 0 0 1 1 1 0 PPR repeat Spec3 PF15795.5 ORF40880 - 2.3e-09 37.7 20.1 7.9e-08 32.7 20.1 2.1 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein Sp38 PF07354.12 ORF40880 - 0.034 13.6 0.0 0.039 13.4 0.0 1.1 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) DUF228 PF02989.14 ORF40880 - 0.14 11.9 0.4 0.28 11.0 0.1 1.5 1 1 1 2 2 2 0 Lyme disease proteins of unknown function DUF5547 PF17701.1 ORF40728 - 0.028 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Snurportin1 PF11538.8 ORF40728 - 0.052 13.7 2.2 0.052 13.7 2.2 1.6 2 0 0 2 2 2 0 Snurportin1 DUF523 PF04463.12 ORF39994 - 0.14 12.2 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF523) ABC1 PF03109.16 ORF39356 - 0.054 13.7 0.1 0.21 11.8 0.0 1.7 1 1 1 2 2 2 0 ABC1 family GCM PF03615.15 ORF39338 - 0.0087 15.9 0.1 0.01 15.7 0.1 1.2 1 0 0 1 1 1 1 GCM motif protein Herpes_capsid PF06112.11 ORF39302 - 1.3 9.1 9.2 1.5 8.8 9.2 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein zf-met PF12874.7 ORF39024 - 0.017 15.5 1.8 0.017 15.5 1.8 2.0 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 ORF39024 - 0.025 15.0 2.3 0.025 15.0 2.3 2.5 3 0 0 3 3 3 0 Zinc finger, C2H2 type DEC-1_N PF04625.13 ORF39024 - 0.032 13.3 0.3 0.036 13.1 0.3 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region zf-C2H2_6 PF13912.6 ORF39024 - 0.041 13.9 2.1 0.071 13.1 2.1 1.4 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_4 PF13894.6 ORF39024 - 0.52 11.3 5.6 0.53 11.3 1.3 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger ACT_5 PF13710.6 ORF38784 - 0.84 9.5 5.9 0.18 11.7 1.3 1.9 2 0 0 2 2 2 0 ACT domain TctB PF07331.11 ORF38411 - 0.032 14.5 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family MFMR_assoc PF16596.5 ORF38411 - 0.09 13.2 1.3 0.11 12.9 1.3 1.1 1 0 0 1 1 1 0 Disordered region downstream of MFMR O-antigen_lig PF13425.6 ORF38411 - 4.3 6.0 5.6 1.1 8.0 2.8 1.4 1 1 0 1 1 1 0 O-antigen ligase like membrane protein LSR PF05624.14 ORF38411 - 5.8 7.0 8.5 8.1 6.5 8.5 1.2 1 0 0 1 1 1 0 Lipolysis stimulated receptor (LSR) Croc_4 PF17691.1 ORF38011 - 0.5 10.4 6.2 0.57 10.2 6.2 1.2 1 0 0 1 1 1 0 Contingent replication of cDNA 4 Ank_2 PF12796.7 ORF37302 - 0.00097 19.7 0.0 0.0023 18.5 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF37302 - 0.0015 19.1 0.1 0.0035 17.9 0.1 1.7 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF37302 - 0.0026 18.0 0.1 0.0037 17.5 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF37302 - 0.015 15.8 0.0 0.059 13.9 0.0 1.9 2 0 0 2 2 2 0 Ankyrin repeat Xpo1 PF08389.12 ORF37131 - 0.004 17.2 0.0 0.096 12.7 0.0 1.9 1 1 1 2 2 2 2 Exportin 1-like protein Cse1 PF08506.10 ORF37131 - 0.028 13.2 0.0 0.04 12.7 0.0 1.2 1 0 0 1 1 1 0 Cse1 SgrT PF15894.5 ORF36448 - 0.024 14.6 0.1 0.047 13.7 0.1 1.6 1 1 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT Alpha_kinase PF02816.18 ORF36109 - 4.3e-15 56.3 0.1 5e-15 56.1 0.1 1.0 1 0 0 1 1 1 1 Alpha-kinase family RhgB_N PF09284.10 ORF34775 - 0.022 14.3 1.0 0.023 14.2 1.0 1.0 1 0 0 1 1 1 0 Rhamnogalacturonan lyase B, N-terminal Legionella_OMP PF05150.12 ORF34638 - 0.16 10.9 0.3 0.16 10.8 0.3 1.0 1 0 0 1 1 1 0 Legionella pneumophila major outer membrane protein precursor Plant_all_beta PF10532.9 ORF34638 - 0.2 11.9 0.0 0.24 11.7 0.0 1.1 1 0 0 1 1 1 0 Plant specific N-all beta domain Spermine_synth PF01564.17 ORF32223 - 0.036 13.5 0.1 0.04 13.3 0.1 1.0 1 0 0 1 1 1 0 Spermine/spermidine synthase domain Arg_decarbox_C PF17944.1 ORF31688 - 0.16 12.6 0.0 0.23 12.1 0.0 1.5 1 1 0 1 1 1 0 Arginine decarboxylase C-terminal helical extension Baculo_p24 PF05073.12 ORF31023 - 0.1 12.4 1.8 0.14 11.9 1.8 1.2 1 0 0 1 1 1 0 Baculovirus P24 capsid protein TFIID-31kDa PF02291.15 ORF30210 - 0.055 13.6 0.1 0.064 13.3 0.1 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit DUF2628 PF10947.8 ORF30117 - 0.18 12.1 2.7 0.23 11.8 2.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) Herpes_UL4 PF03277.13 ORF30055 - 0.026 14.1 0.1 0.03 13.9 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus UL4 family FAM72 PF14976.6 ORF29965 - 0.0037 17.4 0.3 0.0055 16.9 0.3 1.3 1 0 0 1 1 1 1 FAM72 protein OS-D PF03392.13 ORF29965 - 0.04 14.0 0.7 0.05 13.7 0.7 1.1 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D DUF523 PF04463.12 ORF29859 - 0.14 12.2 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF523) PPI_Ypi1 PF07491.11 ORF29597 - 0.039 13.8 0.1 0.22 11.4 0.0 2.0 2 0 0 2 2 2 0 Protein phosphatase inhibitor MtN3_slv PF03083.16 ORF28123 - 0.042 13.9 1.3 1.2 9.2 0.2 2.1 1 1 1 2 2 2 0 Sugar efflux transporter for intercellular exchange Sfi1_C PF10638.9 ORF2761 - 0.082 13.7 1.2 0.093 13.5 1.2 1.1 1 0 0 1 1 1 0 Spindle body associated protein C-terminus DUF1096 PF06493.11 ORF27572 - 0.22 12.0 7.3 0.32 11.5 7.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1096) DUF1324 PF07038.11 ORF26668 - 5.7 7.3 12.4 0.63 10.3 6.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1324) HOIP-UBA PF16678.5 ORF26556 - 0.1 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 HOIP UBA domain pair 2Fe-2S_Ferredox PF11591.8 ORF2561 - 0.14 12.1 4.8 2.5 8.0 0.2 2.5 2 0 0 2 2 2 0 Ferredoxin chloroplastic transit peptide CLIP_SPH_Scar PF18399.1 ORF2408 - 0.098 12.8 0.6 0.14 12.2 0.1 1.6 2 0 0 2 2 2 0 Clip-domain serine protease homolog Scarface EBA-175_VI PF11556.8 ORF2239 - 0.092 13.1 1.1 0.092 13.1 1.1 2.0 1 1 1 2 2 2 0 Erythrocyte binding antigen 175 DUF326 PF03860.16 ORF20921 - 0.11 12.5 1.7 0.19 11.8 1.7 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF326) Bacteriocin_IIc PF10439.9 ORF19518 - 0.013 15.6 0.2 0.019 15.1 0.2 1.2 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide Ribosomal_L44 PF00935.19 ORF19077 - 5.3e-20 71.7 8.8 5.3e-20 71.7 8.8 1.7 1 1 1 2 2 2 1 Ribosomal protein L44 YyzF PF14116.6 ORF19077 - 0.083 12.9 0.3 0.14 12.2 0.3 1.3 1 0 0 1 1 1 0 YyzF-like protein Caudo_TAP PF02413.17 ORF18908 - 7.8e-16 58.4 0.6 9.8e-16 58.1 0.6 1.1 1 0 0 1 1 1 1 Caudovirales tail fibre assembly protein, lambda gpK DUF1155 PF06633.11 ORF18841 - 0.27 10.7 1.0 0.5 9.9 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1155) DUF5547 PF17701.1 ORF18777 - 0.028 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Snurportin1 PF11538.8 ORF18777 - 0.052 13.7 2.2 0.052 13.7 2.2 1.6 2 0 0 2 2 2 0 Snurportin1 TMEM251 PF15190.6 ORF17438 - 0.041 13.8 4.3 0.049 13.6 4.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 251 Phageshock_PspD PF09584.10 ORF17160 - 0.19 11.8 4.0 0.95 9.5 0.4 2.2 2 0 0 2 2 2 0 Phage shock protein PspD (Phageshock_PspD) PRRSV_2b PF07069.11 ORF17160 - 0.43 11.1 1.8 14 6.3 0.4 2.1 2 0 0 2 2 2 0 Porcine reproductive and respiratory syndrome virus 2b Codanin-1_C PF15296.6 ORF15978 - 0.059 13.4 0.3 0.072 13.2 0.3 1.1 1 0 0 1 1 1 0 Codanin-1 C-terminus Molybdopterin_N PF18364.1 ORF15958 - 0.025 14.6 0.0 0.039 14.0 0.0 1.2 1 0 0 1 1 1 0 Molybdopterin oxidoreductase N-terminal domain Herpes_PAP PF03325.13 ORF1566 - 0.0097 15.5 0.2 0.0099 15.5 0.2 1.1 1 0 0 1 1 1 1 Herpesvirus polymerase accessory protein CDPS PF16715.5 ORF15460 - 0.023 14.3 0.2 0.027 14.1 0.2 1.0 1 0 0 1 1 1 0 Cyclodipeptide synthase NUDE_C PF04880.13 ORF152593 - 4.6 7.7 5.1 5.9 7.3 5.1 1.2 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Pkinase PF00069.25 ORF152420 - 6.9e-16 58.4 0.1 7.1e-16 58.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF152420 - 4e-06 26.3 0.0 4.5e-06 26.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF152420 - 0.008 16.1 0.0 0.011 15.7 0.0 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF152420 - 0.016 14.5 0.0 0.022 14.1 0.0 1.2 1 1 0 1 1 1 0 Kinase-like PPR_2 PF13041.6 ORF152315 - 1.9e-09 37.5 0.0 0.0012 19.0 0.0 2.1 2 0 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF152315 - 7.1e-06 26.0 0.0 1.4e-05 25.1 0.0 1.5 1 1 0 1 1 1 1 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF152315 - 0.054 12.8 0.0 0.06 12.7 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF152315 - 0.081 12.6 3.8 1.4 8.7 0.2 3.2 3 0 0 3 3 3 0 PPR repeat DUF3256 PF11644.8 ORF151860 - 0.0021 17.6 1.2 0.0024 17.4 1.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3256) DUF3456 PF11938.8 ORF151860 - 0.11 13.1 4.1 0.12 12.9 4.1 1.0 1 0 0 1 1 1 0 TLR4 regulator and MIR-interacting MSAP DUF5547 PF17701.1 ORF151662 - 0.028 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Snurportin1 PF11538.8 ORF151662 - 0.052 13.7 2.2 0.052 13.7 2.2 1.6 2 0 0 2 2 2 0 Snurportin1 Comm PF15957.5 ORF151354 - 0.066 13.6 1.3 0.066 13.6 1.3 1.5 1 1 0 1 1 1 0 Commissureless zf-H2C2 PF09337.10 ORF151011 - 0.086 13.1 0.3 0.2 11.9 0.3 1.6 1 0 0 1 1 1 0 H2C2 zinc finger FRG1 PF06229.12 ORF150600 - 0.032 14.0 0.0 0.037 13.7 0.0 1.0 1 0 0 1 1 1 0 FRG1-like domain YopE PF03545.13 ORF15035 - 0.15 12.3 1.0 7.9 6.7 0.0 2.1 1 1 1 2 2 2 0 Yersinia virulence determinant (YopE) zinc_ribbon_4 PF13717.6 ORF150315 - 2.3 8.2 7.8 18 5.4 7.8 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Uroplakin_II PF07353.12 ORF149874 - 0.081 12.4 2.5 0.086 12.3 2.5 1.2 1 0 0 1 1 1 0 Uroplakin II Pcc1 PF09341.10 ORF149657 - 1.7e-12 47.3 0.1 1.9e-12 47.1 0.1 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF4424 PF14415.6 ORF149657 - 0.025 13.9 0.1 0.027 13.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4424) PdaC PF13739.6 ORF149657 - 0.038 15.0 0.6 0.046 14.7 0.6 1.3 1 0 0 1 1 1 0 Deacetylase PdaC DUF3379 PF11859.8 ORF149657 - 0.067 12.5 0.2 0.069 12.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) Takusan PF04822.13 ORF149239 - 0.026 14.4 0.5 0.044 13.7 0.3 1.5 1 1 0 1 1 1 0 Takusan SWIM PF04434.17 ORF148866 - 0.23 11.2 4.2 1.5 8.6 0.1 2.3 2 0 0 2 2 2 0 SWIM zinc finger DUF2618 PF10940.8 ORF148677 - 0.52 10.2 11.0 0.19 11.6 5.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2618) DUF1977 PF09320.11 ORF148553 - 0.035 14.4 0.5 0.052 13.8 0.0 1.5 1 1 0 2 2 2 0 Domain of unknown function (DUF1977) WRW PF10206.9 ORF146966 - 0.12 12.7 0.6 0.15 12.5 0.6 1.2 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f UCH_C PF18031.1 ORF146192 - 0.03 14.2 1.4 0.03 14.2 1.4 1.8 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolases # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks313.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks313.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks313.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks313.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2981 PF11200.8 ORF145647 - 0.57 9.9 2.1 0.56 9.9 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) Doppel PF11466.8 ORF145093 - 0.058 13.1 1.0 0.058 13.1 1.0 2.6 2 1 1 3 3 3 0 Prion-like protein Doppel Ureidogly_lyase PF04115.12 ORF145022 - 9.6e-21 74.4 0.0 1.1e-20 74.2 0.0 1.0 1 0 0 1 1 1 1 Ureidoglycolate lyase AAA_21 PF13304.6 ORF144907 - 3.6e-06 27.0 0.5 4.9e-06 26.6 0.5 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 ORF144907 - 0.001 17.8 0.0 0.001 17.8 0.0 1.0 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 ORF144907 - 0.0025 17.3 0.1 0.003 17.0 0.1 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF144907 - 0.0066 16.2 0.8 0.0088 15.8 0.8 1.1 1 0 0 1 1 1 1 AAA ATPase domain DUF2326 PF10088.9 ORF144907 - 0.14 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2326) DUF4750 PF15938.5 ORF144743 - 3.7 7.3 6.2 1.7 8.4 1.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4750) Imm57 PF15596.6 ORF144473 - 0.057 13.8 0.2 0.086 13.2 0.1 1.3 1 1 0 1 1 1 0 Immunity protein 57 ORC6 PF05460.13 ORF144303 - 0.051 12.9 1.7 0.057 12.7 1.7 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) YMF19 PF02326.15 ORF143976 - 0.61 10.9 2.8 0.54 11.1 2.0 1.4 1 1 1 2 2 2 0 Plant ATP synthase F0 SBF2 PF12335.8 ORF143451 - 0.015 14.9 0.4 0.017 14.7 0.4 1.0 1 0 0 1 1 1 0 Myotubularin protein Vps39_2 PF10367.9 ORF143405 - 0.0013 19.2 0.7 0.0014 19.0 0.7 1.1 1 0 0 1 1 1 1 Vacuolar sorting protein 39 domain 2 C1_1 PF00130.22 ORF143405 - 0.066 13.1 0.8 0.18 11.8 0.8 1.7 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2070 PF09843.9 ORF14243 - 6.1 5.0 10.7 6.6 4.9 10.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2238 PF09997.9 ORF142269 - 2.6e-22 79.1 2.5 3.5e-22 78.7 2.5 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2238) PIG-Y PF15159.6 ORF142269 - 0.06 14.3 0.5 0.074 14.0 0.5 1.1 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF4538 PF15061.6 ORF142269 - 0.59 9.9 2.2 0.65 9.8 0.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) GP3 PF03076.14 ORF142023 - 0.029 14.4 0.0 0.03 14.4 0.0 1.1 1 0 0 1 1 1 0 Equine arteritis virus GP3 Rsa3 PF14615.6 ORF142023 - 0.17 11.5 0.1 2.9 7.5 0.0 2.1 1 1 1 2 2 2 0 Ribosome-assembly protein 3 Cbl_N2 PF02761.14 ORF141543 - 0.025 15.3 1.2 0.034 14.9 1.2 1.1 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, EF hand-like domain bZIP_1 PF00170.21 ORF140939 - 0.0046 17.0 0.6 0.0093 16.0 0.6 1.5 1 0 0 1 1 1 1 bZIP transcription factor NPV_P10 PF05531.12 ORF140939 - 0.0076 16.7 0.1 0.011 16.1 0.1 1.2 1 0 0 1 1 1 1 Nucleopolyhedrovirus P10 protein HAP1_N PF04849.13 ORF140939 - 0.016 14.4 0.5 0.016 14.4 0.5 1.1 1 0 0 1 1 1 0 HAP1 N-terminal conserved region Shugoshin_N PF07558.11 ORF140939 - 0.051 13.5 0.7 0.051 13.5 0.7 1.9 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region bZIP_2 PF07716.15 ORF140939 - 0.06 13.4 1.2 0.095 12.8 1.2 1.4 1 0 0 1 1 1 0 Basic region leucine zipper NYD-SP28_assoc PF14775.6 ORF140939 - 0.13 12.4 2.7 0.19 11.9 1.1 1.9 2 0 0 2 2 2 0 Sperm tail C-terminal domain GIT_CC PF16559.5 ORF140939 - 0.22 11.4 4.5 0.14 12.1 2.1 1.9 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Lebercilin PF15619.6 ORF140826 - 7.6e-08 32.2 19.5 8.2e-08 32.1 19.5 1.0 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease PAS_10 PF13596.6 ORF140826 - 0.095 13.3 0.4 0.11 13.1 0.4 1.1 1 0 0 1 1 1 0 PAS domain Adeno_PV PF03910.13 ORF140826 - 0.12 11.0 1.6 0.13 11.0 1.6 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV Allexi_40kDa PF05549.11 ORF140826 - 0.48 9.9 3.8 0.48 9.9 3.8 1.1 1 0 0 1 1 1 0 Allexivirus 40kDa protein Atg14 PF10186.9 ORF140826 - 0.8 8.7 9.6 0.82 8.7 9.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3450 PF11932.8 ORF140826 - 5.3 6.3 12.8 11 5.3 12.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Get5_C PF18514.1 ORF140452 - 0.19 11.4 0.3 7.6 6.3 0.2 2.3 2 0 0 2 2 2 0 Get5 C-terminal domain CTU2 PF10288.9 ORF140146 - 0.0098 16.1 1.5 0.011 16.0 1.5 1.2 1 0 0 1 1 1 1 Cytoplasmic tRNA 2-thiolation protein 2 CDRT4 PF15213.6 ORF140146 - 0.037 14.6 0.8 0.039 14.6 0.8 1.1 1 0 0 1 1 1 0 CMT1A duplicated region transcript 4 protein CBP4 PF07960.11 ORF140146 - 0.065 13.1 2.2 0.1 12.4 2.2 1.5 1 1 0 1 1 1 0 CBP4 S_2TMBeta PF18153.1 ORF139855 - 0.058 13.2 1.3 0.075 12.8 1.3 1.2 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain Kelch_3 PF13415.6 ORF138568 - 0.0037 17.5 0.2 0.0059 16.9 0.2 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain DUF4559 PF15112.6 ORF138543 - 0.13 11.9 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Pex2_Pex12 PF04757.14 ORF137906 - 0.036 13.7 0.0 0.052 13.1 0.0 1.3 1 1 0 1 1 1 0 Pex2 / Pex12 amino terminal region Doppel PF11466.8 ORF137892 - 0.058 13.1 1.0 0.058 13.1 1.0 2.6 2 1 1 3 3 3 0 Prion-like protein Doppel DUF5473 PF17567.2 ORF137147 - 0.089 13.1 0.1 0.089 13.1 0.1 1.3 2 0 0 2 2 2 0 Family of unknown function (DUF5473) C1_2 PF03107.16 ORF136598 - 0.00046 20.4 10.1 0.00046 20.4 10.1 2.0 2 1 0 2 2 2 1 C1 domain zf-B_box PF00643.24 ORF136598 - 0.98 9.6 12.9 13 6.1 7.9 2.6 2 2 0 2 2 2 0 B-box zinc finger bZIP_1 PF00170.21 ORF136545 - 4.9e-08 32.9 10.7 4.9e-08 32.9 10.7 2.1 1 1 1 2 2 2 1 bZIP transcription factor bZIP_2 PF07716.15 ORF136545 - 3.6e-05 23.8 11.3 3.6e-05 23.8 11.3 2.2 2 0 0 2 2 2 1 Basic region leucine zipper TSC22 PF01166.18 ORF136545 - 0.024 15.0 1.0 0.024 15.0 1.0 1.6 2 0 0 2 2 2 0 TSC-22/dip/bun family TrbI_Ftype PF09677.10 ORF136545 - 0.078 13.3 0.8 0.098 13.0 0.8 1.2 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) GvpL_GvpF PF06386.11 ORF136545 - 1.5 8.7 9.0 1.6 8.6 9.0 1.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF FapA PF03961.13 ORF136545 - 1.7 7.1 15.5 2.1 6.9 15.5 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4094 PF13334.6 ORF136545 - 2 8.9 6.5 2.8 8.4 6.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) Med19 PF10278.9 ORF136545 - 2.1 8.2 22.2 2.4 8.1 22.2 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Vfa1 PF08432.10 ORF136545 - 5.4 7.3 20.3 6.1 7.1 20.3 1.0 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF4407 PF14362.6 ORF136545 - 8.3 5.7 7.8 9.5 5.5 7.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Mit_KHE1 PF10173.9 ORF136545 - 8.7 6.4 8.0 9.8 6.2 8.0 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Thioesterase PF00975.20 ORF136467 - 0.14 12.2 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Thioesterase domain Anti-adapt_IraP PF10796.9 ORF135411 - 5.2e-32 110.2 1.6 5.8e-32 110.1 1.6 1.0 1 0 0 1 1 1 1 Sigma-S stabilisation anti-adaptor protein DUF2594 PF10769.9 ORF135411 - 0.00058 19.9 0.9 0.00083 19.3 0.7 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2594) SepF PF04472.12 ORF135411 - 0.0099 16.1 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 1 Cell division protein SepF DUF5547 PF17701.1 ORF135279 - 0.028 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Snurportin1 PF11538.8 ORF135279 - 0.052 13.7 2.2 0.052 13.7 2.2 1.6 2 0 0 2 2 2 0 Snurportin1 PBC PF03792.13 ORF134571 - 0.0017 18.2 0.7 0.0022 17.8 0.7 1.1 1 0 0 1 1 1 1 PBC domain DUF2254 PF10011.9 ORF134571 - 0.19 10.5 0.0 0.24 10.2 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) FXMR_C2 PF16098.5 ORF13320 - 0.12 12.9 0.1 0.17 12.4 0.1 1.3 1 0 0 1 1 1 0 Fragile X-related mental retardation protein C-terminal region 2 MACPF PF01823.19 ORF13320 - 0.13 12.4 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 MAC/Perforin domain BRCT_assoc PF12820.7 ORF13314 - 0.023 14.5 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Serine-rich domain associated with BRCT DUF1324 PF07038.11 ORF133030 - 5.7 7.3 12.4 0.63 10.3 6.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1324) Imm42 PF15593.6 ORF133000 - 0.059 13.8 0.3 0.072 13.6 0.3 1.1 1 0 0 1 1 1 0 Immunity protein 42 DnaJ_CXXCXGXG PF00684.19 ORF132713 - 1e-06 29.0 12.1 1e-06 29.0 12.1 1.5 1 1 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 ORF132713 - 0.012 15.5 1.1 0.012 15.5 1.1 2.3 1 1 1 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF5547 PF17701.1 ORF131328 - 0.028 14.3 0.0 0.029 14.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Snurportin1 PF11538.8 ORF131328 - 0.052 13.7 2.2 0.052 13.7 2.2 1.6 2 0 0 2 2 2 0 Snurportin1 PRIMA1 PF16101.5 ORF130595 - 0.015 15.3 0.9 0.016 15.2 0.9 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Yae1_N PF09811.9 ORF129219 - 0.028 14.1 5.1 0.26 11.0 3.3 2.9 2 1 0 2 2 2 0 Essential protein Yae1, N terminal SOCS_box PF07525.16 ORF128554 - 0.35 11.3 3.9 0.86 10.0 3.7 1.8 1 1 0 1 1 1 0 SOCS box PT PF04886.12 ORF127782 - 0.0082 15.7 4.9 0.011 15.2 3.1 1.9 2 0 0 2 2 2 1 PT repeat Ribosomal_L38e PF01781.18 ORF127700 - 1.6e-20 73.0 3.1 1.9e-20 72.7 3.1 1.1 1 0 0 1 1 1 1 Ribosomal L38e protein family Myc_target_1 PF15179.6 ORF126131 - 1.3 8.9 6.6 1.6 8.6 6.6 1.1 1 0 0 1 1 1 0 Myc target protein 1 TerY_C PF15616.6 ORF125493 - 0.091 12.9 2.1 0.13 12.4 2.1 1.2 1 0 0 1 1 1 0 TerY-C metal binding domain UPF0547 PF10571.9 ORF125493 - 0.38 10.9 5.7 1.2 9.3 5.7 1.8 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 CKS PF01111.19 ORF125405 - 0.082 13.2 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit Pox_T4_N PF04491.12 ORF124811 - 0.087 12.7 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 Poxvirus T4 protein, N terminus LPP PF04728.13 ORF12466 - 2.2e-13 50.4 4.5 2.7e-13 50.1 4.5 1.1 1 0 0 1 1 1 1 Lipoprotein leucine-zipper Cluap1 PF10234.9 ORF12466 - 0.00063 19.2 0.1 0.00073 19.0 0.1 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 CLZ PF16526.5 ORF12466 - 0.0022 18.3 0.4 0.0032 17.8 0.4 1.3 1 1 0 1 1 1 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ZapB PF06005.12 ORF12466 - 0.0049 17.3 2.6 0.0067 16.8 2.6 1.1 1 0 0 1 1 1 1 Cell division protein ZapB DUF16 PF01519.16 ORF12466 - 0.007 16.8 0.0 0.0082 16.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF16 DUF1993 PF09351.10 ORF12466 - 0.012 15.8 0.1 0.013 15.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1993) Tropomyosin_1 PF12718.7 ORF12466 - 0.016 15.4 0.1 0.019 15.1 0.1 1.0 1 0 0 1 1 1 0 Tropomyosin like DivIC PF04977.15 ORF12466 - 0.016 15.0 0.2 0.019 14.7 0.2 1.2 1 0 0 1 1 1 0 Septum formation initiator DUF4201 PF13870.6 ORF12466 - 0.016 14.9 0.3 0.021 14.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) DUF2353 PF09789.9 ORF12466 - 0.018 14.4 0.1 0.02 14.2 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized coiled-coil protein (DUF2353) Alanine_zipper PF11839.8 ORF12466 - 0.019 15.3 2.0 0.024 15.0 1.6 1.4 1 1 0 1 1 1 0 Alanine-zipper, major outer membrane lipoprotein CCDC144C PF14915.6 ORF12466 - 0.019 14.1 0.6 0.024 13.7 0.6 1.0 1 0 0 1 1 1 0 CCDC144C protein coiled-coil region Lebercilin PF15619.6 ORF12466 - 0.021 14.5 0.9 0.026 14.2 0.9 1.1 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease DUF5082 PF16888.5 ORF12466 - 0.025 14.9 0.8 0.033 14.5 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) PI3K_P85_iSH2 PF16454.5 ORF12466 - 0.035 13.7 0.0 0.037 13.6 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain CENP-F_N PF10481.9 ORF12466 - 0.036 13.7 0.1 0.042 13.5 0.1 1.0 1 0 0 1 1 1 0 Cenp-F N-terminal domain Glutaredoxin2_C PF04399.13 ORF12466 - 0.045 13.6 0.0 0.052 13.4 0.0 1.1 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain Lzipper-MIP1 PF14389.6 ORF12466 - 0.046 14.0 0.0 0.056 13.7 0.0 1.2 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 TMF_DNA_bd PF12329.8 ORF12466 - 0.065 13.2 1.3 0.082 12.9 1.3 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DLP_helical PF18709.1 ORF12466 - 0.079 12.1 0.4 0.094 11.9 0.4 1.0 1 0 0 1 1 1 0 Dynamin-like helical domain DUF3138 PF11336.8 ORF12466 - 0.082 11.5 0.5 0.08 11.6 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) SlyX PF04102.12 ORF12466 - 0.097 13.3 1.1 0.12 13.0 1.1 1.1 1 0 0 1 1 1 0 SlyX ABC_tran_CTD PF16326.5 ORF12466 - 0.12 12.7 0.7 0.16 12.3 0.7 1.2 1 0 0 1 1 1 0 ABC transporter C-terminal domain Vac_Fusion PF02346.16 ORF12466 - 0.14 11.8 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 Chordopoxvirus multifunctional envelope protein A27 DUF4988 PF16378.5 ORF12466 - 0.16 11.6 0.3 0.2 11.3 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function XhlA PF10779.9 ORF12466 - 2.4 8.4 3.9 0.71 10.1 0.3 1.9 2 1 1 3 3 2 0 Haemolysin XhlA DUF4407 PF14362.6 ORF12466 - 2.6 7.3 9.1 0.61 9.4 3.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DASH_Dad4 PF08650.10 ORF12453 - 0.11 12.5 0.7 12 6.0 0.3 2.1 1 1 1 2 2 2 0 DASH complex subunit Dad4 TFIIF_beta PF02270.15 ORF124035 - 0.062 13.5 0.3 0.11 12.6 0.3 1.4 1 1 0 1 1 1 0 TFIIF, beta subunit HTH domain YtpI PF14007.6 ORF124035 - 0.19 11.9 4.1 0.5 10.5 3.2 1.9 1 1 1 2 2 2 0 YtpI-like protein EF-hand_5 PF13202.6 ORF122802 - 5.9e-05 22.4 0.1 0.00017 21.0 0.1 1.8 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF122802 - 7.6e-05 22.3 0.1 0.00025 20.7 0.1 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF122802 - 0.00019 21.8 0.5 0.00025 21.4 0.5 1.3 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF122802 - 0.00088 18.7 0.1 0.0021 17.5 0.1 1.7 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF122802 - 0.0052 16.6 0.3 0.01 15.7 0.3 1.6 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF120840 - 1.1e-05 24.7 0.1 1.8e-05 24.0 0.1 1.3 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF120840 - 3e-05 23.3 0.0 4.9e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF120840 - 0.00011 21.9 0.1 0.00019 21.1 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF120840 - 0.0024 18.3 0.0 0.003 18.0 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF120840 - 0.0059 16.4 0.0 0.0082 16.0 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair Ldh_1_C PF02866.18 ORF118736 - 1.3e-17 64.3 0.0 1.4e-17 64.2 0.0 1.0 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain RE_HpaII PF09561.10 ORF117682 - 0.035 13.5 0.1 0.035 13.5 0.1 1.1 1 0 0 1 1 1 0 HpaII restriction endonuclease UPF0242 PF06785.11 ORF116097 - 0.062 13.4 2.3 0.066 13.3 2.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DIL PF01843.19 ORF115727 - 0.1 12.9 0.2 0.11 12.7 0.2 1.2 1 0 0 1 1 1 0 DIL domain Stm1_N PF09598.10 ORF11491 - 0.28 12.1 4.8 0.37 11.7 4.8 1.1 1 0 0 1 1 1 0 Stm1 EcpB_C PF18649.1 ORF114874 - 0.089 12.8 1.4 0.092 12.7 0.6 1.6 1 1 0 1 1 1 0 EcpB C-terminal domain Defensin_5 PF18251.1 ORF114156 - 0.048 13.8 0.0 0.094 12.8 0.0 1.4 1 0 0 1 1 1 0 Fungal defensin Copsin NB-ARC PF00931.22 ORF113794 - 0.027 13.6 0.0 0.032 13.4 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain RelB PF04221.12 ORF113164 - 2.1e-31 107.7 0.2 2.3e-31 107.6 0.2 1.0 1 0 0 1 1 1 1 RelB antitoxin Ribosomal_L23eN PF03939.13 ORF112547 - 0.083 13.1 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain RCDG1 PF15725.5 ORF110177 - 0.035 14.5 3.5 0.047 14.1 3.5 1.1 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein RXLR PF16810.5 ORF110099 - 0.38 11.2 1.6 0.45 11.0 1.6 1.1 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity AWS PF17907.1 ORF109367 - 0.052 13.6 2.3 0.98 9.5 1.1 2.3 2 0 0 2 2 2 0 AWS domain Lipase_bact_N PF12262.8 ORF109367 - 0.092 12.1 0.7 0.11 11.8 0.7 1.0 1 0 0 1 1 1 0 Bacterial virulence factor lipase N-terminal zf-RING_9 PF13901.6 ORF108191 - 0.021 14.8 0.3 0.027 14.5 0.2 1.3 1 1 0 1 1 1 0 Putative zinc-RING and/or ribbon Mtc PF03820.17 ORF108191 - 0.03 13.4 1.3 0.033 13.3 1.3 1.0 1 0 0 1 1 1 0 Tricarboxylate carrier Defensin_5 PF18251.1 ORF107971 - 0.048 13.8 0.0 0.094 12.8 0.0 1.4 1 0 0 1 1 1 0 Fungal defensin Copsin UL17 PF17640.2 ORF103953 - 0.59 10.2 6.9 0.11 12.6 1.6 2.0 1 1 1 2 2 2 0 Uncharacterized UL17 Fer4_9 PF13187.6 ORF103943 - 0.00067 19.8 0.2 0.0011 19.1 0.2 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain ETF_QO PF05187.13 ORF103943 - 0.0011 19.1 0.0 0.0012 19.0 0.0 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_21 PF14697.6 ORF103943 - 0.0014 18.7 0.1 0.0024 17.9 0.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF103943 - 0.0019 18.7 0.3 0.0031 18.1 0.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_19 PF06902.11 ORF103943 - 0.021 14.9 0.0 0.038 14.1 0.0 1.4 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4 PF00037.27 ORF103943 - 0.036 13.9 2.7 0.18 11.7 1.1 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 ORF103943 - 0.039 14.1 2.4 0.039 14.1 2.4 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Rubella_E2 PF05749.11 ORF103943 - 0.05 13.1 0.1 0.051 13.0 0.1 1.1 1 0 0 1 1 1 0 Rubella membrane glycoprotein E2 Fer4_13 PF13370.6 ORF103943 - 0.14 12.7 2.8 2 9.0 1.3 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_10 PF13237.6 ORF103943 - 0.14 12.3 4.1 0.19 11.9 1.6 1.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF103943 - 0.47 11.1 3.6 3.2 8.5 2.9 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 ORF103943 - 1.2 9.4 4.4 5.3 7.3 2.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain MtN3_slv PF03083.16 ORF103543 - 0.042 13.9 1.3 1.2 9.2 0.2 2.1 1 1 1 2 2 2 0 Sugar efflux transporter for intercellular exchange DUF1518 PF07469.12 ORF101960 - 0.47 10.9 5.7 0.36 11.3 3.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF1518) Thionin PF00321.17 ORF101571 - 8.2 7.0 9.9 6.6 7.3 2.4 3.2 3 1 0 3 3 3 0 Plant thionin TMEM100 PF16311.5 ORF101085 - 0.24 11.0 2.0 0.29 10.7 2.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 100 Imm42 PF15593.6 ORF100831 - 0.059 13.8 0.3 0.072 13.6 0.3 1.1 1 0 0 1 1 1 0 Immunity protein 42 RNA_pol_Rpb1_R PF05001.13 NODE_63870_length_253_cov_1.059633_g55929_i0reverse_frame_1 - 0.02 15.2 3.7 1.8 9.0 0.5 2.7 2 0 0 2 2 2 0 RNA polymerase Rpb1 C-terminal repeat DUF823 PF05689.11 NODE_63869_length_253_cov_1.082569_g55928_i0forward_frame_1 - 0.015 15.1 0.1 0.017 14.9 0.1 1.0 1 0 0 1 1 1 0 Salmonella repeat of unknown function (DUF823) Inhibitor_I67 PF11405.8 NODE_63865_length_253_cov_1.096330_g55924_i0reverse_frame_1 - 0.085 13.1 1.4 0.48 10.7 0.7 2.1 2 0 0 2 2 2 0 Bromelain inhibitor VI Peptidase_S74 PF13884.6 NODE_63857_length_253_cov_1.266055_g55916_i0forward_frame_1 - 0.25 11.7 1.5 0.4 11.0 1.5 1.3 1 0 0 1 1 1 0 Chaperone of endosialidase COX15-CtaA PF02628.15 NODE_63853_length_253_cov_1.330275_g55912_i0reverse_frame_1 - 0.07 12.2 0.0 0.077 12.0 0.0 1.0 1 0 0 1 1 1 0 Cytochrome oxidase assembly protein Osw5 PF17062.5 NODE_63851_length_253_cov_1.399083_g55910_i0forward_frame_1 - 1.6 8.9 9.9 0.054 13.6 3.1 2.0 2 1 0 2 2 2 0 Outer spore wall 5 Baculo_LEF5_C PF11792.8 NODE_63848_length_253_cov_1.431193_g55907_i0forward_frame_1 - 0.13 12.0 2.3 0.46 10.2 0.0 2.4 3 0 0 3 3 3 0 Baculoviridae late expression factor 5 C-terminal domain MatE PF01554.18 NODE_63847_length_253_cov_1.431193_g55906_i0reverse_frame_1 - 2.7e-06 27.1 2.7 3.1e-06 26.9 2.7 1.0 1 0 0 1 1 1 1 MatE DUF3332 PF11810.8 NODE_63845_length_253_cov_1.458716_g55904_i0reverse_frame_1 - 0.064 12.9 0.0 0.067 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DUF5480 PF17576.2 NODE_63844_length_253_cov_1.463303_g55903_i0reverse_frame_1 - 0.024 14.6 2.3 0.024 14.6 0.2 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5480) ANAPC3 PF12895.7 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_1 - 0.33 11.2 4.0 0.47 10.7 4.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 AC_N PF16214.5 NODE_63838_length_253_cov_1.545872_g55897_i0reverse_frame_1 - 0.25 10.5 2.7 0.27 10.3 2.7 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region RNase_H PF00075.24 NODE_63834_length_253_cov_1.591743_g55893_i0reverse_frame_1 - 0.00054 20.2 0.1 0.00065 19.9 0.1 1.1 1 0 0 1 1 1 1 RNase H DUF3179 PF11376.8 NODE_63834_length_253_cov_1.591743_g55893_i0reverse_frame_1 - 0.0072 15.7 0.0 0.0091 15.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3179) Shugoshin_N PF07558.11 NODE_63831_length_253_cov_1.646789_g55890_i0forward_frame_1 - 0.11 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region ABC_trans_CmpB PF06541.11 NODE_63827_length_253_cov_1.688073_g55886_i0forward_frame_1 - 0.021 15.0 2.6 0.025 14.8 2.6 1.1 1 0 0 1 1 1 0 Putative ABC-transporter type IV RPAP1_C PF08620.10 NODE_63824_length_253_cov_1.738532_g55883_i0reverse_frame_1 - 0.013 15.6 0.9 0.021 15.0 0.8 1.4 1 1 0 1 1 1 0 RPAP1-like, C-terminal Crust_neurohorm PF01147.17 NODE_63822_length_253_cov_1.788991_g55881_i0reverse_frame_1 - 1.9 8.3 8.7 0.29 11.0 3.0 2.0 1 1 1 2 2 2 0 Crustacean CHH/MIH/GIH neurohormone family Lamprin PF06403.11 NODE_63814_length_253_cov_1.935780_g55873_i0reverse_frame_1 - 0.33 10.9 12.7 1.6 8.6 12.7 1.9 1 1 0 1 1 1 0 Lamprin FAP PF07174.11 NODE_63814_length_253_cov_1.935780_g55873_i0forward_frame_1 - 0.19 11.2 6.7 0.21 11.0 6.7 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Kelch_1 PF01344.25 NODE_63812_length_253_cov_1.986239_g55871_i0forward_frame_1 - 0.017 14.7 1.3 0.025 14.2 1.3 1.2 1 0 0 1 1 1 0 Kelch motif Kelch_4 PF13418.6 NODE_63812_length_253_cov_1.986239_g55871_i0forward_frame_1 - 0.034 14.1 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_63812_length_253_cov_1.986239_g55871_i0forward_frame_1 - 0.049 13.6 0.8 0.097 12.7 0.7 1.6 1 1 0 1 1 1 0 Kelch motif Fimbrial PF00419.20 NODE_63804_length_253_cov_2.128440_g55863_i0forward_frame_1 - 1.6e-07 31.7 0.1 1.8e-07 31.5 0.1 1.0 1 0 0 1 1 1 1 Fimbrial protein MFS_1 PF07690.16 NODE_63799_length_253_cov_2.252294_g55858_i0reverse_frame_1 - 0.0077 15.2 3.7 0.009 15.0 3.7 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily L27_N PF09060.10 NODE_63797_length_253_cov_2.325688_g55856_i0reverse_frame_1 - 0.029 14.4 0.0 0.049 13.7 0.0 1.4 1 0 0 1 1 1 0 L27_N CytB6-F_Fe-S PF08802.10 NODE_63790_length_253_cov_2.458716_g55849_i0reverse_frame_1 - 0.025 14.6 0.8 3.6 7.7 0.0 2.5 1 1 1 2 2 2 0 Cytochrome B6-F complex Fe-S subunit STI1 PF17830.1 NODE_63789_length_253_cov_2.573394_g55848_i0reverse_frame_1 - 0.016 15.1 0.7 0.03 14.3 0.7 1.4 1 0 0 1 1 1 0 STI1 domain HNH_2 PF13391.6 NODE_63783_length_253_cov_2.720183_g55842_i0reverse_frame_1 - 0.093 12.9 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 HNH endonuclease Disintegrin PF00200.23 NODE_63779_length_253_cov_3.009174_g55838_i0forward_frame_1 - 0.027 15.2 1.6 0.18 12.6 0.3 2.0 2 0 0 2 2 2 0 Disintegrin DUF3709 PF12493.8 NODE_63777_length_253_cov_3.050459_g55836_i0reverse_frame_1 - 0.025 14.6 0.2 0.046 13.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3709) WD40 PF00400.32 NODE_63773_length_253_cov_3.633028_g55832_i0forward_frame_1 - 3e-13 50.0 5.0 5.7e-08 33.3 0.7 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF3261 PF11659.8 NODE_63773_length_253_cov_3.633028_g55832_i0forward_frame_1 - 0.017 15.0 0.0 0.12 12.2 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3261) ANAPC4_WD40 PF12894.7 NODE_63773_length_253_cov_3.633028_g55832_i0forward_frame_1 - 0.022 15.1 0.4 0.28 11.5 0.3 1.9 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Ac81 PF05820.11 NODE_63769_length_253_cov_4.500000_g55828_i0reverse_frame_1 - 0.014 14.9 3.7 0.017 14.7 3.7 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 MORN PF02493.20 NODE_63763_length_253_cov_30.220183_g55822_i0reverse_frame_1 - 0.0067 16.2 1.3 0.026 14.4 0.3 2.1 2 0 0 2 2 2 1 MORN repeat TSGP1 PF07771.11 NODE_63756_length_253_cov_40.348624_g55815_i0reverse_frame_1 - 0.028 14.6 2.2 0.034 14.3 2.2 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 DUF743 PF05332.11 NODE_63754_length_253_cov_43.371560_g55813_i0forward_frame_1 - 0.17 11.9 0.2 13 5.9 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF743) Rad9 PF04139.13 NODE_63752_length_253_cov_46.481651_g55811_i0reverse_frame_1 - 0.071 12.5 1.8 0.079 12.4 1.8 1.1 1 0 0 1 1 1 0 Rad9 MCM_bind PF09739.9 NODE_63750_length_253_cov_50.417431_g55809_i0forward_frame_1 - 0.00022 19.8 0.0 0.00026 19.6 0.0 1.0 1 0 0 1 1 1 1 Mini-chromosome maintenance replisome factor DUF3079 PF11278.8 NODE_63747_length_253_cov_63.334862_g55806_i0reverse_frame_1 - 0.11 12.3 0.1 0.23 11.3 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3079) DUF4549 PF15082.6 NODE_63744_length_253_cov_67.000000_g55803_i0reverse_frame_1 - 0.014 15.2 0.0 0.017 14.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4549) CfAFP PF05264.11 NODE_63741_length_253_cov_83.077982_g55800_i0reverse_frame_1 - 0.058 13.4 0.2 0.075 13.0 0.2 1.1 1 0 0 1 1 1 0 Choristoneura fumiferana antifreeze protein (CfAFP) DUF2633 PF11119.8 NODE_63737_length_253_cov_99.610092_g55796_i0reverse_frame_1 - 0.069 13.1 0.2 0.1 12.5 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Calici_MSP PF05752.11 NODE_63736_length_253_cov_101.155963_g55795_i0reverse_frame_1 - 0.19 11.6 0.1 0.22 11.4 0.1 1.1 1 0 0 1 1 1 0 Calicivirus minor structural protein RSS_P20 PF11757.8 NODE_63735_length_253_cov_101.481651_g55794_i0forward_frame_1 - 0.09 13.2 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Suppressor of RNA silencing P21-like N-terminal domain Neuralized PF07177.12 NODE_63725_length_253_cov_174.032110_g55784_i0forward_frame_1 - 7.7e-06 26.0 0.0 8.5e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Neuralized DUF3819 PF12842.7 NODE_63724_length_253_cov_178.862385_g55783_i0reverse_frame_1 - 0.13 12.2 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3819) BatD PF13584.6 NODE_63719_length_253_cov_612.311927_g55778_i0reverse_frame_1 - 0.16 10.8 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Oxygen tolerance BatD PF13584.6 NODE_63718_length_253_cov_664.004587_g55777_i0forward_frame_1 - 0.14 10.9 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Oxygen tolerance hemP PF10636.9 NODE_63714_length_254_cov_0.913242_g55773_i0reverse_frame_1 - 0.13 12.0 4.0 0.22 11.3 4.0 1.3 1 0 0 1 1 1 0 Hemin uptake protein hemP Metallophos PF00149.28 NODE_63712_length_254_cov_0.990868_g55771_i0forward_frame_1 - 1.2e-09 38.9 0.0 1.3e-09 38.9 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Flavodoxin_4 PF12682.7 NODE_63710_length_254_cov_1.063927_g55769_i0reverse_frame_1 - 0.14 11.8 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Flavodoxin SUR7 PF06687.12 NODE_63709_length_254_cov_1.091324_g55768_i0reverse_frame_1 - 0.072 12.7 0.5 0.077 12.6 0.5 1.0 1 0 0 1 1 1 0 SUR7/PalI family TMEM138 PF14935.6 NODE_63706_length_254_cov_1.095890_g55765_i0reverse_frame_1 - 0.017 15.8 0.1 0.02 15.6 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 138 LRR_4 PF12799.7 NODE_63706_length_254_cov_1.095890_g55765_i0forward_frame_1 - 0.043 14.3 6.0 1.7 9.2 3.4 2.3 2 1 0 2 2 2 0 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_63706_length_254_cov_1.095890_g55765_i0forward_frame_1 - 0.05 13.4 3.5 3.9 7.3 0.2 2.6 3 0 0 3 3 3 0 Leucine rich repeat LRR_1 PF00560.33 NODE_63706_length_254_cov_1.095890_g55765_i0forward_frame_1 - 0.098 13.3 6.9 4.8 8.1 0.2 2.6 2 1 0 2 2 2 0 Leucine Rich Repeat DUF3404 PF11884.8 NODE_63703_length_254_cov_1.132420_g55762_i0forward_frame_1 - 1.2 8.3 5.3 1.3 8.2 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) Spt46 PF17734.1 NODE_63702_length_254_cov_1.155251_g55761_i0forward_frame_1 - 0.11 12.3 0.7 0.11 12.3 0.7 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 vMSA PF00695.19 NODE_63701_length_254_cov_1.200913_g55760_i0reverse_frame_1 - 0.16 11.0 0.9 0.18 10.9 0.9 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF3761 PF12587.8 NODE_63689_length_254_cov_1.333333_g55748_i0forward_frame_1 - 0.55 10.7 2.6 0.94 10.0 2.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3761) G_path_suppress PF15991.5 NODE_63680_length_254_cov_1.433790_g55739_i0reverse_frame_1 - 0.038 14.1 0.0 0.041 14.0 0.0 1.0 1 0 0 1 1 1 0 G-protein pathway suppressor SVWC PF15430.6 NODE_63675_length_254_cov_1.461187_g55734_i0forward_frame_1 - 0.073 13.3 0.5 0.096 13.0 0.3 1.4 2 0 0 2 2 2 0 Single domain von Willebrand factor type C TMEM237 PF15383.6 NODE_63672_length_254_cov_1.493151_g55731_i0forward_frame_1 - 0.04 13.0 0.1 0.049 12.7 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 237 Methyltransf_30 PF05430.11 NODE_63670_length_254_cov_1.529680_g55729_i0reverse_frame_1 - 1.4e-27 96.0 0.1 1.6e-27 95.9 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase DUF2973 PF11189.8 NODE_63664_length_254_cov_1.625571_g55723_i0forward_frame_1 - 0.43 10.7 1.7 0.4 10.8 0.7 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2973) CBP_BcsF PF11120.8 NODE_63658_length_254_cov_1.776256_g55717_i0forward_frame_1 - 9.7 6.4 7.9 6.2 7.0 3.7 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsF Neural_ProG_Cyt PF06567.11 NODE_63654_length_254_cov_1.817352_g55713_i0reverse_frame_1 - 0.024 14.9 0.2 0.03 14.6 0.2 1.2 1 0 0 1 1 1 0 Neural chondroitin sulphate proteoglycan cytoplasmic domain Geminin PF07412.12 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 4.6e-06 26.5 4.5 6e-06 26.1 4.5 1.1 1 0 0 1 1 1 1 Geminin DUF2046 PF09755.9 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.0015 17.8 0.8 0.0016 17.7 0.8 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) UPF0242 PF06785.11 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.0016 18.6 1.5 0.0017 18.5 1.5 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF4164 PF13747.6 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.0059 16.9 2.9 0.0081 16.4 2.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4164) KASH_CCD PF14662.6 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.01 15.7 4.2 0.013 15.3 4.2 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DivIC PF04977.15 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.02 14.7 2.0 0.031 14.1 2.0 1.3 1 0 0 1 1 1 0 Septum formation initiator Csm1_N PF18504.1 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.02 15.2 4.1 0.032 14.6 4.1 1.3 1 0 0 1 1 1 0 Csm1 N-terminal domain bZIP_1 PF00170.21 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.028 14.5 3.1 0.028 14.5 3.1 1.7 2 1 0 2 2 2 0 bZIP transcription factor ZapB PF06005.12 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.068 13.6 6.8 0.11 13.0 6.8 1.3 1 0 0 1 1 1 0 Cell division protein ZapB GIT_CC PF16559.5 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.08 12.8 4.8 0.11 12.4 4.8 1.2 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor Cep57_CLD_2 PF14197.6 NODE_63652_length_254_cov_1.821918_g55711_i0reverse_frame_1 - 0.65 10.1 9.0 2.2 8.4 9.0 1.7 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 Baculo_ODV-E27 PF05314.11 NODE_63651_length_254_cov_1.853881_g55710_i0reverse_frame_1 - 0.013 14.7 0.4 0.013 14.7 0.4 1.0 1 0 0 1 1 1 0 Baculovirus occlusion-derived virus envelope protein EC27 FliD_N PF02465.18 NODE_63645_length_254_cov_1.926941_g55704_i0reverse_frame_1 - 0.039 14.7 7.7 0.049 14.3 7.7 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus Microtub_bind PF13931.6 NODE_63645_length_254_cov_1.926941_g55704_i0reverse_frame_1 - 0.22 11.9 7.9 0.32 11.4 7.9 1.4 1 1 0 1 1 1 0 Kinesin-associated microtubule-binding Flavi_M PF01004.19 NODE_63643_length_254_cov_1.995434_g55702_i0reverse_frame_1 - 0.13 12.0 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 Flavivirus envelope glycoprotein M RPEL PF02755.15 NODE_63643_length_254_cov_1.995434_g55702_i0forward_frame_1 - 0.096 12.4 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 RPEL repeat FeS PF04060.13 NODE_63642_length_254_cov_2.004566_g55701_i0reverse_frame_1 - 0.038 13.6 1.0 0.038 13.6 1.0 3.2 3 0 0 3 3 3 0 Putative Fe-S cluster DUF1929 PF09118.11 NODE_63633_length_254_cov_2.283105_g55692_i0forward_frame_1 - 0.013 15.8 0.1 0.018 15.3 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1929) RBD PF02196.15 NODE_63633_length_254_cov_2.283105_g55692_i0forward_frame_1 - 0.087 12.9 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Raf-like Ras-binding domain adh_short_C2 PF13561.6 NODE_63624_length_254_cov_2.817352_g55683_i0forward_frame_1 - 4.6e-16 59.1 0.0 5e-16 59.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 NODE_63624_length_254_cov_2.817352_g55683_i0forward_frame_1 - 1.2e-10 41.2 0.0 1.4e-10 40.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase NLRC4_HD2 PF17776.1 NODE_63622_length_254_cov_3.045662_g55681_i0forward_frame_1 - 0.14 12.7 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 NLRC4 helical domain HD2 zinc_ribbon_10 PF10058.9 NODE_63618_length_254_cov_3.328767_g55677_i0reverse_frame_1 - 0.0049 16.6 0.2 0.0049 16.6 0.2 2.1 2 1 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein DUF1072 PF06380.11 NODE_63616_length_254_cov_3.611872_g55675_i0forward_frame_1 - 0.012 15.5 4.4 0.017 14.9 4.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) 7tm_3 PF00003.22 NODE_63611_length_254_cov_4.739726_g55670_i0forward_frame_1 - 0.025 14.3 0.1 0.027 14.2 0.1 1.1 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR UPF0560 PF10577.9 NODE_63609_length_254_cov_10.671233_g55668_i0forward_frame_1 - 7.8 4.9 4.8 8.6 4.7 4.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 DUF5129 PF17173.4 NODE_63608_length_254_cov_10.926941_g55667_i0reverse_frame_1 - 0.18 10.9 0.6 0.2 10.7 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) FXR_C1 PF16096.5 NODE_63608_length_254_cov_10.926941_g55667_i0forward_frame_1 - 1.5 9.1 7.0 2.1 8.6 7.0 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 DUF3432 PF11914.8 NODE_63601_length_254_cov_38.840183_g55660_i0forward_frame_1 - 0.036 14.3 0.5 0.046 14.0 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) VitD-bind_III PF09164.10 NODE_63601_length_254_cov_38.840183_g55660_i0forward_frame_1 - 0.063 13.3 0.1 0.085 12.9 0.1 1.2 1 0 0 1 1 1 0 Vitamin D binding protein, domain III 2OG-FeII_Oxy_5 PF13759.6 NODE_63598_length_254_cov_47.570776_g55657_i0reverse_frame_1 - 6.7e-09 36.1 0.0 7.2e-09 36.0 0.0 1.2 1 0 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy_3 PF13640.6 NODE_63598_length_254_cov_47.570776_g55657_i0reverse_frame_1 - 0.00056 20.8 0.0 0.00058 20.7 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Nt_Gln_amidase PF09764.9 NODE_63586_length_254_cov_58.945205_g55645_i0forward_frame_1 - 0.023 14.3 1.5 0.024 14.2 1.5 1.1 1 0 0 1 1 1 0 N-terminal glutamine amidase MANEC PF07502.14 NODE_63583_length_254_cov_60.543379_g55642_i0forward_frame_1 - 0.038 14.3 0.4 0.045 14.0 0.4 1.1 1 0 0 1 1 1 0 MANEC domain Yos9_DD PF17880.1 NODE_63581_length_254_cov_62.858447_g55640_i0forward_frame_1 - 0.08 13.1 0.2 0.092 12.9 0.2 1.1 1 0 0 1 1 1 0 Yos9 dimerzation domain Cadherin_tail PF15974.5 NODE_63576_length_254_cov_65.570776_g55635_i0reverse_frame_1 - 0.0072 16.6 0.3 0.0073 16.6 0.3 1.1 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region She9_MDM33 PF05546.11 NODE_63574_length_254_cov_67.794521_g55633_i0reverse_frame_1 - 0.0034 17.2 0.7 0.0034 17.2 0.7 1.3 1 1 0 1 1 1 1 She9 / Mdm33 family DUF3291 PF11695.8 NODE_63574_length_254_cov_67.794521_g55633_i0reverse_frame_1 - 0.026 14.2 0.1 0.037 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3291) Lipoprotein_Ltp PF07553.11 NODE_63571_length_254_cov_72.789954_g55630_i0forward_frame_1 - 0.13 12.5 0.6 0.21 11.9 0.6 1.2 1 0 0 1 1 1 0 Host cell surface-exposed lipoprotein ACDC PF14733.6 NODE_63570_length_254_cov_76.470320_g55629_i0forward_frame_1 - 0.016 15.5 3.2 0.019 15.3 3.2 1.2 1 0 0 1 1 1 0 AP2-coincident C-terminal TMEM174 PF15029.6 NODE_63567_length_254_cov_89.337900_g55626_i0forward_frame_1 - 0.22 11.2 0.4 0.24 11.1 0.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 174 IF3_N PF05198.16 NODE_63565_length_254_cov_91.876712_g55624_i0reverse_frame_1 - 0.085 13.1 0.1 0.099 12.9 0.1 1.2 1 0 0 1 1 1 0 Translation initiation factor IF-3, N-terminal domain HIP1_clath_bdg PF16515.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 3.8e-06 27.4 6.7 4e-06 27.4 6.7 1.1 1 0 0 1 1 1 1 Clathrin-binding domain of Huntingtin-interacting protein 1 IFT57 PF10498.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.0017 17.4 7.2 0.0021 17.1 7.2 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Seryl_tRNA_N PF02403.22 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.0023 18.2 9.8 0.0029 17.8 9.8 1.2 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF1640 PF07798.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.006 16.7 7.3 0.0067 16.5 7.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) RPW8 PF05659.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.0084 15.8 6.7 0.017 14.8 6.7 1.5 1 1 0 1 1 1 1 Arabidopsis broad-spectrum mildew resistance protein RPW8 GlutR_dimer PF00745.20 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.012 16.1 3.6 0.014 15.9 3.6 1.1 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain bZIP_1 PF00170.21 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.013 15.5 14.8 0.021 14.9 2.3 2.2 1 1 1 2 2 2 0 bZIP transcription factor DUF241 PF03087.14 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.015 15.1 3.9 0.017 14.9 3.9 1.0 1 0 0 1 1 1 0 Arabidopsis protein of unknown function Val_tRNA-synt_C PF10458.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.02 15.2 2.5 0.02 15.2 2.5 2.3 2 0 0 2 2 2 0 Valyl tRNA synthetase tRNA binding arm Cluap1 PF10234.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.022 14.1 6.5 0.026 14.0 6.5 1.1 1 0 0 1 1 1 0 Clusterin-associated protein-1 SseC PF04888.12 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.033 13.8 2.4 0.042 13.4 2.4 1.3 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family SlyX PF04102.12 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.036 14.7 6.1 0.32 11.6 5.0 2.1 1 1 1 2 2 2 0 SlyX Phage_GPO PF05929.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.052 13.2 3.0 0.06 13.0 3.0 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Atg14 PF10186.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.065 12.3 7.0 0.075 12.1 7.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 KxDL PF10241.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.067 13.5 5.7 0.094 13.0 5.7 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein Exonuc_VII_L PF02601.15 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.071 12.7 2.6 0.079 12.5 2.6 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit K-box PF01486.17 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.073 13.3 9.4 0.1 12.8 8.5 1.7 1 1 1 2 2 2 0 K-box region BLOC1_2 PF10046.9 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.09 13.1 11.7 0.54 10.6 2.2 2.0 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ABC_tran_CTD PF16326.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.13 12.5 8.1 0.41 10.9 8.1 1.8 1 1 0 1 1 1 0 ABC transporter C-terminal domain DUF948 PF06103.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.14 12.4 4.0 0.21 11.8 3.9 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) bZIP_2 PF07716.15 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.17 12.0 10.7 0.13 12.4 2.9 2.2 2 0 0 2 2 2 0 Basic region leucine zipper DUF4407 PF14362.6 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.2 11.0 3.0 0.22 10.8 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Allexi_40kDa PF05549.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.2 11.1 3.8 0.22 11.0 3.8 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein Fzo_mitofusin PF04799.13 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.32 10.5 4.3 0.39 10.2 4.3 1.2 1 0 0 1 1 1 0 fzo-like conserved region DUF4298 PF14131.6 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.39 10.7 6.5 4.2 7.4 0.9 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4298) DUF641 PF04859.12 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.42 10.9 8.7 1.3 9.3 7.4 1.8 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF4446 PF14584.6 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.47 10.4 5.3 0.73 9.8 5.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) TMPIT PF07851.13 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.49 9.6 4.7 0.51 9.5 4.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein YtxH PF12732.7 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.5 10.9 5.6 1 9.9 5.6 1.6 1 1 0 1 1 1 0 YtxH-like protein CLP_protease PF00574.23 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.79 9.6 3.7 7 6.5 0.6 2.0 1 1 1 2 2 2 0 Clp protease DUF4795 PF16043.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.84 9.2 13.0 1.2 8.7 5.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) VGPC1_C PF16799.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.94 9.5 13.1 1.8 8.6 2.1 2.5 2 1 0 2 2 2 0 C-terminal membrane-localisation domain of ion-channel, VCN1 DUF1664 PF07889.12 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 0.96 9.5 5.8 1.7 8.7 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4337 PF14235.6 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 1.2 9.2 5.6 1.4 9.0 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) V_ATPase_I PF01496.19 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 2.1 6.2 6.2 2.5 5.9 6.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4806 PF16064.5 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 4.1 7.8 7.3 5.5 7.4 1.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4806) DivIC PF04977.15 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 4.2 7.2 12.6 5.2 6.9 2.9 2.1 1 1 1 2 2 2 0 Septum formation initiator eIF-4B PF06273.11 NODE_63558_length_254_cov_129.835616_g55617_i0forward_frame_1 - 4.3 6.3 8.4 4.4 6.2 8.4 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B MerR PF00376.23 NODE_63555_length_254_cov_143.780822_g55614_i0reverse_frame_1 - 0.13 12.1 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 MerR family regulatory protein DUF4611 PF15387.6 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 1.4 9.2 16.0 0.09 13.0 11.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4611) CENP-B_dimeris PF09026.10 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 1.6 9.2 16.5 2.4 8.6 16.5 1.3 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DNA_pol_phi PF04931.13 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 2.3 6.2 12.4 2.1 6.4 12.4 1.1 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 2.7 6.1 14.2 3.1 5.9 14.2 1.0 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 3 6.0 13.4 3.5 5.8 13.4 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF4637 PF15470.6 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 9.3 6.0 10.1 11 5.7 10.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) PTPRCAP PF15713.5 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 9.8 6.4 15.1 11 6.3 15.1 1.0 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated API5 PF05918.11 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_1 - 9.9 4.8 7.4 11 4.7 7.4 1.0 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) Dsh_C PF12316.8 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_1 - 0.15 12.5 15.3 0.18 12.2 15.3 1.0 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Herpes_capsid PF06112.11 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_1 - 0.92 9.5 11.8 1.1 9.3 11.8 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Bac_surface_Ag PF01103.23 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_1 - 4.8 6.6 8.8 9 5.7 1.9 2.0 1 1 1 2 2 2 0 Surface antigen DUF1844 PF08899.11 NODE_63552_length_254_cov_194.397260_g55611_i0reverse_frame_1 - 0.068 13.5 0.0 0.092 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1844) Opiods_neuropep PF01160.18 NODE_63544_length_254_cov_588.584475_g55603_i0forward_frame_1 - 0.74 10.0 5.4 11 6.2 1.1 2.3 1 1 1 2 2 2 0 Vertebrate endogenous opioids neuropeptide Pkinase PF00069.25 NODE_63538_length_254_cov_5334.127854_g55597_i0reverse_frame_1 - 7.5e-15 55.0 0.0 8.3e-15 54.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_63538_length_254_cov_5334.127854_g55597_i0reverse_frame_1 - 9.8e-11 41.4 0.0 1.1e-10 41.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase GTP_EFTU PF00009.27 NODE_63532_length_255_cov_0.909091_g55591_i0forward_frame_1 - 0.001 18.6 0.1 0.0012 18.4 0.1 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain HMG_CoA_synt_C PF08540.10 NODE_63523_length_255_cov_1.136364_g55582_i0reverse_frame_1 - 0.12 11.9 0.0 0.15 11.6 0.0 1.0 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A synthase C terminal Fusion_F0 PF13044.6 NODE_63516_length_255_cov_1.259091_g55575_i0forward_frame_1 - 0.59 8.7 3.0 0.6 8.7 3.0 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0, Isavirus YecR PF13992.6 NODE_63509_length_255_cov_1.377273_g55568_i0reverse_frame_1 - 0.0018 18.6 1.5 0.0024 18.1 1.5 1.2 1 0 0 1 1 1 1 YecR-like lipoprotein HTH_54 PF18607.1 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_1 - 0.093 12.8 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 ParA helix turn helix domain DUF5502 PF17606.2 NODE_63502_length_255_cov_1.440909_g55561_i0forward_frame_1 - 0.02 15.6 0.0 0.026 15.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5502) Gon7 PF08738.10 NODE_63501_length_255_cov_1.450000_g55560_i0reverse_frame_1 - 0.17 12.0 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Gon7 family Fer4_8 PF13183.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_1 - 0.11 13.0 0.3 0.11 13.0 0.3 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain ArsA_ATPase PF02374.15 NODE_63493_length_255_cov_1.495455_g55552_i0reverse_frame_1 - 0.04 13.1 0.0 0.043 13.0 0.0 1.1 1 0 0 1 1 1 0 Anion-transporting ATPase Chitin_synth_1 PF01644.17 NODE_63492_length_255_cov_1.531818_g55551_i0reverse_frame_1 - 4.1e-13 49.6 0.0 4.1e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Chitin synthase Spin-Ssty PF02513.17 NODE_63483_length_255_cov_1.672727_g55542_i0forward_frame_1 - 0.14 11.9 1.9 7.9 6.3 0.6 2.3 1 1 1 2 2 2 0 Spin/Ssty Family Endonuclease_7 PF02945.15 NODE_63481_length_255_cov_1.690909_g55540_i0reverse_frame_1 - 0.0021 17.9 2.2 0.0025 17.7 2.2 1.2 1 0 0 1 1 1 1 Recombination endonuclease VII # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks314.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks314.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks314.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks314.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NDUF_B5 PF09781.9 NODE_63475_length_255_cov_1.777273_g55534_i0forward_frame_1 - 3 7.4 4.8 1.6 8.2 3.3 1.3 1 1 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit EutH PF04346.12 NODE_63472_length_255_cov_1.813636_g55531_i0forward_frame_1 - 0.098 11.8 3.7 0.1 11.8 3.7 1.0 1 0 0 1 1 1 0 Ethanolamine utilisation protein, EutH WD40 PF00400.32 NODE_63469_length_255_cov_1.822727_g55528_i0reverse_frame_1 - 5.1e-09 36.6 0.1 0.00069 20.4 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat WD40_like PF17005.5 NODE_63469_length_255_cov_1.822727_g55528_i0reverse_frame_1 - 0.0019 17.6 0.1 0.0021 17.4 0.1 1.0 1 0 0 1 1 1 1 WD40-like domain DUF776 PF05604.11 NODE_63460_length_255_cov_1.959091_g55519_i0forward_frame_1 - 0.14 12.5 2.0 0.15 12.4 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF776) SecA_PP_bind PF01043.20 NODE_63458_length_255_cov_2.000000_g55517_i0forward_frame_1 - 4.8e-25 88.4 0.0 6.3e-25 88.0 0.0 1.2 1 0 0 1 1 1 1 SecA preprotein cross-linking domain SecA_DEAD PF07517.14 NODE_63458_length_255_cov_2.000000_g55517_i0forward_frame_1 - 8.8e-09 35.1 0.5 1.4e-08 34.4 0.5 1.4 1 1 0 1 1 1 1 SecA DEAD-like domain DUF3810 PF12725.7 NODE_63457_length_255_cov_2.013636_g55516_i0forward_frame_1 - 0.75 9.1 4.2 0.79 9.0 4.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Peptidase_M56 PF05569.11 NODE_63446_length_255_cov_2.372727_g55505_i0reverse_frame_1 - 0.32 10.1 3.4 0.4 9.8 3.4 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 Keratin_B2 PF01500.17 NODE_63436_length_255_cov_2.495455_g55495_i0reverse_frame_1 - 0.021 14.8 7.6 0.045 13.7 7.6 1.6 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Keratin_B2_2 PF13885.6 NODE_63436_length_255_cov_2.495455_g55495_i0reverse_frame_1 - 0.036 14.0 9.6 0.29 11.1 9.6 2.1 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Extensin_2 PF04554.13 NODE_63436_length_255_cov_2.495455_g55495_i0reverse_frame_1 - 2 8.5 29.0 1 9.5 17.4 2.1 1 1 1 2 2 2 0 Extensin-like region ARL2_Bind_BART PF11527.8 NODE_63431_length_255_cov_2.950000_g55490_i0reverse_frame_1 - 0.0011 19.0 0.1 0.0018 18.4 0.1 1.3 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART PsbM PF05151.12 NODE_63431_length_255_cov_2.950000_g55490_i0forward_frame_1 - 0.053 13.3 4.3 0.12 12.2 4.3 1.6 1 0 0 1 1 1 0 Photosystem II reaction centre M protein (PsbM) AA_permease_2 PF13520.6 NODE_63428_length_255_cov_3.172727_g55487_i0reverse_frame_1 - 0.61 8.8 6.8 0.73 8.6 6.8 1.0 1 0 0 1 1 1 0 Amino acid permease APP_Cu_bd PF12924.7 NODE_63424_length_255_cov_3.318182_g55483_i0forward_frame_1 - 0.037 14.8 1.6 0.064 14.0 1.6 1.5 1 0 0 1 1 1 0 Copper-binding of amyloid precursor, CuBD YWFCY PF14293.6 NODE_63418_length_255_cov_3.904545_g55477_i0reverse_frame_1 - 0.19 12.1 1.5 0.23 11.8 0.3 1.8 2 1 0 2 2 2 0 YWFCY protein DUF1652 PF07865.11 NODE_63418_length_255_cov_3.904545_g55477_i0forward_frame_1 - 0.22 11.4 0.4 0.22 11.4 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1652) P5-ATPase PF12409.8 NODE_63414_length_255_cov_11.045455_g55473_i0forward_frame_1 - 0.16 12.1 1.7 0.2 11.8 1.7 1.3 1 0 0 1 1 1 0 P5-type ATPase cation transporter UPF0182 PF03699.13 NODE_63414_length_255_cov_11.045455_g55473_i0forward_frame_1 - 0.87 7.6 4.1 0.9 7.6 4.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) TB PF00683.17 NODE_63413_length_255_cov_14.150000_g55472_i0forward_frame_1 - 0.047 13.4 2.5 0.047 13.4 2.5 2.3 1 1 1 2 2 2 0 TB domain DUF2840 PF11000.8 NODE_63402_length_255_cov_51.763636_g55461_i0forward_frame_1 - 0.033 14.0 0.0 0.038 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2840) DUF3088 PF11287.8 NODE_63401_length_255_cov_53.913636_g55460_i0forward_frame_1 - 0.12 12.2 0.1 0.15 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3088) zf-RanBP PF00641.18 NODE_63401_length_255_cov_53.913636_g55460_i0forward_frame_1 - 2.8 7.3 20.7 4.1 6.8 11.2 3.0 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others CENP-B_dimeris PF09026.10 NODE_63398_length_255_cov_57.618182_g55457_i0reverse_frame_1 - 0.04 14.3 0.2 0.047 14.1 0.2 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DUF3381 PF11861.8 NODE_63398_length_255_cov_57.618182_g55457_i0reverse_frame_1 - 0.27 11.0 15.2 0.29 10.9 15.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) FAM176 PF14851.6 NODE_63398_length_255_cov_57.618182_g55457_i0reverse_frame_1 - 0.74 9.5 4.7 0.8 9.4 4.7 1.1 1 0 0 1 1 1 0 FAM176 family PRA1 PF03208.19 NODE_63398_length_255_cov_57.618182_g55457_i0forward_frame_1 - 0.14 11.8 9.1 0.17 11.5 9.1 1.1 1 0 0 1 1 1 0 PRA1 family protein PNTB_4TM PF12769.7 NODE_63394_length_255_cov_68.227273_g55453_i0forward_frame_1 - 0.046 14.2 0.1 0.054 14.0 0.1 1.2 1 0 0 1 1 1 0 4TM region of pyridine nucleotide transhydrogenase, mitoch Mon2_C PF16206.5 NODE_63388_length_255_cov_91.009091_g55447_i0reverse_frame_1 - 0.042 12.0 0.1 0.044 11.9 0.1 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein RRM_1 PF00076.22 NODE_63387_length_255_cov_97.395455_g55446_i0forward_frame_1 - 8.4e-06 25.5 0.0 1.4e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PsbN PF02468.15 NODE_63387_length_255_cov_97.395455_g55446_i0forward_frame_1 - 0.12 12.3 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre N protein (psbN) Evr1_Alr PF04777.13 NODE_63381_length_255_cov_124.822727_g55440_i0reverse_frame_1 - 0.057 13.9 0.1 0.067 13.7 0.1 1.2 1 0 0 1 1 1 0 Erv1 / Alr family PsbY PF06298.11 NODE_63380_length_255_cov_127.318182_g55439_i0reverse_frame_1 - 0.032 14.1 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 Photosystem II protein Y (PsbY) Diphthami_syn_2 PF01902.17 NODE_63376_length_255_cov_139.618182_g55435_i0forward_frame_1 - 0.027 14.0 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 Diphthamide synthase PsbI PF02532.14 NODE_63376_length_255_cov_139.618182_g55435_i0forward_frame_1 - 0.14 12.1 1.1 0.21 11.6 1.1 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) DDOST_48kD PF03345.14 NODE_63374_length_255_cov_150.450000_g55433_i0forward_frame_1 - 5.2e-09 35.4 0.1 5.2e-09 35.4 0.1 1.3 2 0 0 2 2 2 1 Oligosaccharyltransferase 48 kDa subunit beta PhetRS_B1 PF18262.1 NODE_63372_length_255_cov_172.918182_g55431_i0reverse_frame_1 - 3.2e-10 40.1 1.8 4.5e-10 39.6 1.8 1.3 1 0 0 1 1 1 1 Phe-tRNA synthetase beta subunit B1 domain rve PF00665.26 NODE_63372_length_255_cov_172.918182_g55431_i0reverse_frame_1 - 0.14 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain MORN PF02493.20 NODE_63368_length_255_cov_226.936364_g55427_i0reverse_frame_1 - 3.8e-08 32.8 7.8 0.00014 21.6 0.2 3.6 3 1 0 3 3 3 3 MORN repeat Peptidase_M50 PF02163.22 NODE_63362_length_255_cov_548.772727_g55421_i0reverse_frame_1 - 0.084 12.1 0.0 0.11 11.8 0.0 1.2 1 0 0 1 1 1 0 Peptidase family M50 BrnA_antitoxin PF14384.6 NODE_63361_length_255_cov_747.972727_g55420_i0reverse_frame_1 - 8.3 7.0 7.3 1.5 9.4 2.6 1.8 2 0 0 2 2 2 0 BrnA antitoxin of type II toxin-antitoxin system DUF2102 PF09875.9 NODE_63359_length_255_cov_4286.745455_g55418_i0forward_frame_1 - 0.015 15.0 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) YppG PF14179.6 NODE_63356_length_256_cov_0.959276_g55415_i0forward_frame_2 - 1.1 10.0 5.8 1.5 9.5 5.8 1.3 1 1 0 1 1 1 0 YppG-like protein Pex24p PF06398.11 NODE_63355_length_256_cov_0.995475_g55414_i0forward_frame_2 - 1.4 7.8 4.4 0.3 10.0 1.2 1.4 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin QueF_N PF14819.6 NODE_63353_length_256_cov_1.067873_g55412_i0reverse_frame_3 - 0.046 14.0 0.7 0.068 13.5 0.4 1.4 1 1 0 1 1 1 0 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CxC1 PF18802.1 NODE_63352_length_256_cov_1.072398_g55411_i0forward_frame_2 - 0.1 12.8 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases Toxin_35 PF10530.9 NODE_63343_length_256_cov_1.149321_g55402_i0reverse_frame_3 - 0.087 12.8 3.6 0.12 12.4 3.6 1.2 1 0 0 1 1 1 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold Epiglycanin_C PF14654.6 NODE_63341_length_256_cov_1.221719_g55400_i0reverse_frame_3 - 0.0012 18.9 0.0 0.0014 18.6 0.0 1.1 1 0 0 1 1 1 1 Mucin, catalytic, TM and cytoplasmic tail region OAF PF14941.6 NODE_63341_length_256_cov_1.221719_g55400_i0reverse_frame_2 - 0.026 14.0 0.9 0.028 13.9 0.9 1.0 1 0 0 1 1 1 0 Transcriptional regulator, Out at first SLR1-BP PF07333.12 NODE_63341_length_256_cov_1.221719_g55400_i0reverse_frame_2 - 0.14 12.6 2.9 0.29 11.6 2.9 1.5 1 1 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Retrotrans_gag PF03732.17 NODE_63340_length_256_cov_1.235294_g55399_i0reverse_frame_2 - 0.045 14.0 0.1 0.057 13.7 0.1 1.2 1 0 0 1 1 1 0 Retrotransposon gag protein RHH_7 PF16777.5 NODE_63340_length_256_cov_1.235294_g55399_i0reverse_frame_2 - 0.18 12.2 0.3 0.25 11.7 0.3 1.2 1 0 0 1 1 1 0 Transcriptional regulator, RHH-like, CopG Kinesin PF00225.23 NODE_63338_length_256_cov_1.266968_g55397_i0forward_frame_3 - 1.3e-24 86.8 0.7 1.5e-24 86.5 0.7 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_63338_length_256_cov_1.266968_g55397_i0forward_frame_3 - 1.8e-15 57.2 0.2 2e-15 57.0 0.2 1.0 1 0 0 1 1 1 1 Microtubule binding PIF1 PF05970.14 NODE_63338_length_256_cov_1.266968_g55397_i0forward_frame_3 - 0.03 13.5 0.1 0.035 13.3 0.1 1.2 1 0 0 1 1 1 0 PIF1-like helicase Fijivirus_P9-2 PF06837.11 NODE_63337_length_256_cov_1.266968_g55396_i0reverse_frame_3 - 0.28 10.6 7.4 0.38 10.2 7.4 1.2 1 0 0 1 1 1 0 Fijivirus P9-2 protein EF-hand_12 PF17901.1 NODE_63335_length_256_cov_1.294118_g55394_i0reverse_frame_3 - 0.072 13.6 0.0 0.11 13.0 0.0 1.3 1 0 0 1 1 1 0 EF-hand fold domain zf-CCCH PF00642.24 NODE_63335_length_256_cov_1.294118_g55394_i0reverse_frame_3 - 0.16 11.9 0.3 0.16 11.9 0.3 1.9 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) APT PF03440.14 NODE_63334_length_256_cov_1.298643_g55393_i0reverse_frame_3 - 0.2 11.7 0.5 0.26 11.3 0.5 1.2 1 0 0 1 1 1 0 Aerolysin/Pertussis toxin (APT) domain LisH_2 PF16045.5 NODE_63334_length_256_cov_1.298643_g55393_i0forward_frame_3 - 0.021 13.8 0.5 0.021 13.8 0.5 1.9 2 0 0 2 2 2 0 LisH Vps5 PF09325.10 NODE_63334_length_256_cov_1.298643_g55393_i0forward_frame_3 - 0.1 12.1 0.2 0.11 12.0 0.2 1.0 1 0 0 1 1 1 0 Vps5 C terminal like TF_Otx PF03529.13 NODE_63333_length_256_cov_1.348416_g55392_i0forward_frame_3 - 0.027 14.9 0.3 0.035 14.5 0.3 1.1 1 0 0 1 1 1 0 Otx1 transcription factor Gp37 PF09646.10 NODE_63332_length_256_cov_1.352941_g55391_i0reverse_frame_2 - 0.18 11.6 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 Gp37 protein DUF809 PF05663.11 NODE_63331_length_256_cov_1.352941_g55390_i0reverse_frame_3 - 0.75 9.9 2.8 0.83 9.8 2.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) DUF4215 PF13948.6 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.005 17.2 0.8 0.41 11.1 1.4 2.2 1 1 1 2 2 2 2 Domain of unknown function (DUF4215) FXa_inhibition PF14670.6 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.012 15.8 4.4 0.28 11.5 0.3 2.2 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site cEGF PF12662.7 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.021 14.7 4.5 0.061 13.3 0.4 2.3 2 0 0 2 2 2 0 Complement Clr-like EGF-like TIL PF01826.17 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.069 13.4 1.8 1.2 9.4 0.4 2.1 1 1 1 2 2 2 0 Trypsin Inhibitor like cysteine rich domain Dicty_CTDC PF00526.18 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.1 12.5 1.1 0.1 12.5 1.1 1.8 2 0 0 2 2 2 0 Dictyostelium (slime mold) repeat Antistasin PF02822.14 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.25 12.0 2.0 3.5 8.4 2.0 2.3 1 1 0 1 1 1 0 Antistasin family EGF_CA PF07645.15 NODE_63331_length_256_cov_1.352941_g55390_i0forward_frame_2 - 0.26 11.5 3.2 9.2 6.6 0.7 2.2 1 1 1 2 2 2 0 Calcium-binding EGF domain Pkinase PF00069.25 NODE_63330_length_256_cov_1.371041_g55389_i0reverse_frame_3 - 2.2e-10 40.4 0.0 2.4e-10 40.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_63330_length_256_cov_1.371041_g55389_i0reverse_frame_3 - 6.5e-08 32.2 0.0 7e-08 32.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Lip_prot_lig_C PF10437.9 NODE_63330_length_256_cov_1.371041_g55389_i0reverse_frame_3 - 0.075 13.0 0.9 0.14 12.2 0.2 1.7 1 1 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus Fer4_4 PF12800.7 NODE_63329_length_256_cov_1.375566_g55388_i0forward_frame_2 - 9.3 7.0 10.6 0.2 12.2 2.9 2.4 3 0 0 3 3 3 0 4Fe-4S binding domain Phage_integrase PF00589.22 NODE_63327_length_256_cov_1.384615_g55386_i0reverse_frame_3 - 0.0038 17.1 0.0 0.0039 17.0 0.0 1.1 1 0 0 1 1 1 1 Phage integrase family Intg_mem_TP0381 PF09529.10 NODE_63326_length_256_cov_1.384615_g55385_i0reverse_frame_3 - 0.015 14.8 3.7 0.017 14.7 3.7 1.1 1 0 0 1 1 1 0 Integral membrane protein (intg_mem_TP0381) Tricho_coat PF05892.11 NODE_63326_length_256_cov_1.384615_g55385_i0forward_frame_3 - 0.013 15.2 0.0 0.016 15.0 0.0 1.0 1 0 0 1 1 1 0 Trichovirus coat protein TubC_N PF18563.1 NODE_63323_length_256_cov_1.434389_g55382_i0forward_frame_2 - 0.022 14.7 0.0 0.028 14.4 0.0 1.2 1 0 0 1 1 1 0 TubC N-terminal docking domain zf-PHD-like PF15446.6 NODE_63322_length_256_cov_1.438914_g55381_i0reverse_frame_3 - 0.01 15.4 1.0 0.013 15.2 1.0 1.1 1 0 0 1 1 1 0 PHD/FYVE-zinc-finger like domain DUF4051 PF13260.6 NODE_63322_length_256_cov_1.438914_g55381_i0reverse_frame_2 - 1.5 8.6 4.4 2.7 7.8 4.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4051) DUF1281 PF06924.11 NODE_63311_length_256_cov_1.628959_g55370_i0reverse_frame_2 - 0.19 11.3 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) Cript PF10235.9 NODE_63307_length_256_cov_1.678733_g55366_i0reverse_frame_3 - 0.03 14.9 4.9 0.035 14.7 4.9 1.1 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT LTP_2 PF14368.6 NODE_63306_length_256_cov_1.710407_g55365_i0forward_frame_3 - 0.012 15.7 0.5 0.014 15.4 0.5 1.2 1 0 0 1 1 1 0 Probable lipid transfer PAS PF00989.25 NODE_63306_length_256_cov_1.710407_g55365_i0forward_frame_2 - 1.1e-07 31.8 0.0 1.2e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 NODE_63306_length_256_cov_1.710407_g55365_i0forward_frame_2 - 2.2e-07 31.1 0.0 2.4e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 PAS domain PAS_8 PF13188.7 NODE_63306_length_256_cov_1.710407_g55365_i0forward_frame_2 - 0.05 13.6 0.0 0.058 13.4 0.0 1.1 1 0 0 1 1 1 0 PAS domain Leader_Trp PF08255.11 NODE_63305_length_256_cov_1.773756_g55364_i0forward_frame_3 - 0.036 14.0 1.8 0.036 14.0 1.8 3.3 3 1 0 3 3 3 0 Trp-operon Leader Peptide BPD_transp_1 PF00528.22 NODE_63305_length_256_cov_1.773756_g55364_i0forward_frame_2 - 1.9e-12 47.3 0.9 2.1e-12 47.2 0.9 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SIS_2 PF13580.6 NODE_63297_length_256_cov_1.977376_g55356_i0reverse_frame_3 - 0.0012 18.8 0.3 0.66 10.0 0.1 2.2 1 1 1 2 2 2 2 SIS domain DUF2688 PF10892.8 NODE_63297_length_256_cov_1.977376_g55356_i0reverse_frame_2 - 0.15 11.6 6.5 1 8.9 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) NOB1_Zn_bind PF08772.11 NODE_63297_length_256_cov_1.977376_g55356_i0forward_frame_3 - 0.0011 19.0 4.8 0.064 13.4 2.8 2.3 1 1 1 2 2 2 2 Nin one binding (NOB1) Zn-ribbon like zf-CCHC_6 PF15288.6 NODE_63297_length_256_cov_1.977376_g55356_i0forward_frame_3 - 0.046 13.6 6.8 1.2 9.0 0.2 3.1 2 1 1 3 3 3 0 Zinc knuckle Asp5 PF17000.5 NODE_63297_length_256_cov_1.977376_g55356_i0forward_frame_2 - 0.39 10.9 1.7 14 5.9 0.1 2.2 1 1 0 2 2 2 0 Accessory secretory protein Sec, Asp5 Glyco_hydro_31 PF01055.26 NODE_63295_length_256_cov_2.004525_g55354_i0reverse_frame_3 - 4e-16 59.3 1.9 4e-16 59.2 1.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 CAAX_1 PF15895.5 NODE_63294_length_256_cov_2.004525_g55353_i0reverse_frame_2 - 0.018 15.0 0.6 0.02 14.8 0.6 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 PEP-utilizers_C PF02896.18 NODE_63293_length_256_cov_2.113122_g55352_i0reverse_frame_2 - 0.024 13.7 0.1 0.027 13.6 0.1 1.0 1 0 0 1 1 1 0 PEP-utilising enzyme, TIM barrel domain SnAC PF14619.6 NODE_63292_length_256_cov_2.122172_g55351_i0reverse_frame_3 - 0.034 14.8 0.8 0.048 14.3 0.8 1.3 1 1 0 1 1 1 0 Snf2-ATP coupling, chromatin remodelling complex CagY_I PF14585.6 NODE_63292_length_256_cov_2.122172_g55351_i0reverse_frame_3 - 0.04 14.0 1.1 0.062 13.4 1.1 1.3 1 0 0 1 1 1 0 CagY type 1 repeat DDT PF02791.17 NODE_63291_length_256_cov_2.135747_g55350_i0forward_frame_2 - 0.024 14.9 0.3 0.032 14.5 0.3 1.3 1 0 0 1 1 1 0 DDT domain TRP PF06011.12 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 0.0037 16.1 5.5 0.0043 15.8 5.5 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF3270 PF11674.8 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 0.032 14.4 2.1 0.044 14.0 2.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF4282 PF14110.6 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 0.12 13.1 9.4 0.089 13.5 8.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4282) CrgA PF06781.12 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 4.8 7.3 8.0 0.19 11.8 0.7 2.1 1 1 1 2 2 2 0 Cell division protein CrgA Sarcolipin PF05366.11 NODE_63290_length_256_cov_2.171946_g55349_i0reverse_frame_3 - 8.7 6.1 10.9 1.4 8.7 3.8 2.5 2 0 0 2 2 2 0 Sarcolipin MRP-S35 PF10246.9 NODE_63289_length_256_cov_2.180995_g55348_i0reverse_frame_3 - 0.1 12.5 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein MRP-S35 Scs3p PF10261.9 NODE_63285_length_256_cov_2.230769_g55344_i0reverse_frame_2 - 0.004 16.7 1.1 0.0049 16.4 1.1 1.1 1 0 0 1 1 1 1 Inositol phospholipid synthesis and fat-storage-inducing TM zf-RanBP PF00641.18 NODE_63285_length_256_cov_2.230769_g55344_i0forward_frame_3 - 0.099 12.0 1.9 0.099 12.0 1.9 1.8 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others DUF5433 PF17498.2 NODE_63284_length_256_cov_2.262443_g55343_i0forward_frame_3 - 0.027 14.7 0.2 0.049 13.8 0.2 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5433) Vesiculo_matrix PF06326.12 NODE_63284_length_256_cov_2.262443_g55343_i0forward_frame_2 - 0.019 14.8 0.1 0.021 14.6 0.1 1.0 1 0 0 1 1 1 0 Vesiculovirus matrix protein DUF1972 PF09314.11 NODE_63283_length_256_cov_2.271493_g55342_i0forward_frame_2 - 0.15 11.7 0.1 0.17 11.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1972) DUF1067 PF06362.11 NODE_63282_length_256_cov_2.285068_g55341_i0forward_frame_3 - 0.022 15.5 1.7 0.031 15.1 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1067) Molybdop_Fe4S4 PF04879.16 NODE_63280_length_256_cov_2.303167_g55339_i0forward_frame_2 - 0.029 14.4 0.3 0.051 13.6 0.3 1.4 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain Hydrophob_seed PF14547.6 NODE_63279_length_256_cov_2.339367_g55338_i0reverse_frame_2 - 0.031 14.5 2.9 0.047 13.9 2.9 1.3 1 0 0 1 1 1 0 Hydrophobic seed protein MRF_C1 PF13887.6 NODE_63279_length_256_cov_2.339367_g55338_i0forward_frame_2 - 2.6 7.3 0.0 2.6 7.3 0.0 2.5 3 0 0 3 3 3 0 Myelin gene regulatory factor -C-terminal domain 1 PTPA PF03095.15 NODE_63277_length_256_cov_2.352941_g55336_i0forward_frame_3 - 1.2e-18 67.6 0.0 1.2e-18 67.6 0.0 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein RecG_N PF17190.4 NODE_63277_length_256_cov_2.352941_g55336_i0forward_frame_3 - 0.014 16.1 0.1 0.016 15.9 0.1 1.3 1 1 0 1 1 1 0 RecG N-terminal helical domain Rx_N PF18052.1 NODE_63277_length_256_cov_2.352941_g55336_i0forward_frame_3 - 0.097 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Rx N-terminal domain DUF1572 PF07609.11 NODE_63276_length_256_cov_2.357466_g55335_i0reverse_frame_2 - 0.13 12.1 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) Aldose_epim PF01263.20 NODE_63272_length_256_cov_2.488688_g55331_i0reverse_frame_3 - 5e-08 32.6 0.4 5.8e-08 32.4 0.4 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase DUF3304 PF11745.8 NODE_63272_length_256_cov_2.488688_g55331_i0reverse_frame_2 - 0.092 13.2 0.0 0.098 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3304) Fusion_gly_K PF01621.17 NODE_63272_length_256_cov_2.488688_g55331_i0forward_frame_3 - 0.018 14.1 0.0 0.018 14.1 0.0 1.0 1 0 0 1 1 1 0 Cell fusion glycoprotein K CAP_C PF08603.11 NODE_63268_length_256_cov_2.755656_g55327_i0forward_frame_3 - 0.014 15.0 2.2 0.016 14.8 2.2 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) C terminal DUF4513 PF14983.6 NODE_63268_length_256_cov_2.755656_g55327_i0forward_frame_2 - 0.11 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4513) DUF1409 PF07197.12 NODE_63264_length_256_cov_2.868778_g55323_i0reverse_frame_2 - 0.043 13.7 0.1 0.073 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1409) B12D PF06522.11 NODE_63261_length_256_cov_3.122172_g55320_i0forward_frame_2 - 0.022 14.5 0.2 0.042 13.7 0.2 1.4 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit EcsB PF05975.12 NODE_63259_length_256_cov_3.208145_g55318_i0reverse_frame_2 - 0.0081 15.1 0.5 0.009 14.9 0.5 1.0 1 0 0 1 1 1 1 Bacterial ABC transporter protein EcsB DUF4508 PF14969.6 NODE_63259_length_256_cov_3.208145_g55318_i0forward_frame_2 - 0.15 12.4 0.2 0.19 12.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) GluR_Homer-bdg PF10606.9 NODE_63258_length_256_cov_3.244344_g55317_i0forward_frame_2 - 0.11 12.7 0.3 0.18 12.0 0.2 1.5 1 1 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor PUFD PF16553.5 NODE_63257_length_256_cov_3.352941_g55316_i0forward_frame_3 - 0.11 12.7 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 BCORL-PCGF1-binding domain PAM2 PF07145.15 NODE_63254_length_256_cov_3.601810_g55313_i0reverse_frame_2 - 1.2 9.0 5.4 23 5.0 0.6 3.1 1 1 0 2 2 2 0 Ataxin-2 C-terminal region ABC_tran PF00005.27 NODE_63253_length_256_cov_3.615385_g55312_i0reverse_frame_2 - 1.7e-12 48.0 0.0 1.8e-12 47.9 0.0 1.0 1 0 0 1 1 1 1 ABC transporter Oxidored_nitro PF00148.19 NODE_63253_length_256_cov_3.615385_g55312_i0reverse_frame_2 - 0.044 12.5 0.1 0.051 12.3 0.1 1.0 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase MORN PF02493.20 NODE_63247_length_256_cov_4.502262_g55306_i0reverse_frame_3 - 9.7e-10 37.8 8.0 1.2e-05 24.9 0.3 3.2 3 0 0 3 3 3 3 MORN repeat DUF648 PF04890.13 NODE_63247_length_256_cov_4.502262_g55306_i0forward_frame_3 - 0.034 13.9 0.4 0.053 13.3 0.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF648) DASH_Spc34 PF08657.10 NODE_63246_length_256_cov_4.638009_g55305_i0reverse_frame_2 - 0.0022 17.9 1.1 0.0023 17.8 1.1 1.1 1 0 0 1 1 1 1 DASH complex subunit Spc34 DUF4028 PF13220.6 NODE_63243_length_256_cov_7.085973_g55302_i0reverse_frame_3 - 0.052 13.3 0.1 0.08 12.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) DUF4520 PF15016.6 NODE_63243_length_256_cov_7.085973_g55302_i0reverse_frame_2 - 0.0057 16.7 0.4 0.0071 16.4 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4520) DUF3822 PF12864.7 NODE_63235_length_256_cov_41.552036_g55294_i0reverse_frame_3 - 0.063 12.5 0.0 0.076 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3822) DNA_pol_lambd_f PF10391.9 NODE_63235_length_256_cov_41.552036_g55294_i0forward_frame_3 - 0.056 13.3 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda 2OG-FeII_Oxy_3 PF13640.6 NODE_63233_length_256_cov_44.162896_g55292_i0forward_frame_3 - 0.04 14.8 0.2 0.055 14.4 0.2 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily DUF3802 PF12290.8 NODE_63232_length_256_cov_45.692308_g55291_i0forward_frame_2 - 0.13 12.8 0.5 8.1 7.0 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3802) CPCFC PF17223.3 NODE_63229_length_256_cov_50.176471_g55288_i0reverse_frame_3 - 0.23 11.2 3.4 2.1 8.2 0.1 2.4 2 0 0 2 2 2 0 Cuticle protein CPCFC DUF3225 PF11533.8 NODE_63229_length_256_cov_50.176471_g55288_i0reverse_frame_2 - 0.039 13.7 0.0 0.048 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3225) DUF2200 PF09966.9 NODE_63229_length_256_cov_50.176471_g55288_i0forward_frame_2 - 5.7e-08 32.9 0.1 8.7e-08 32.3 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2200) GP41 PF00517.17 NODE_63227_length_256_cov_52.475113_g55286_i0reverse_frame_2 - 0.077 12.9 0.1 0.077 12.9 0.1 1.1 1 0 0 1 1 1 0 Retroviral envelope protein DUF2269 PF10027.9 NODE_63226_length_256_cov_56.809955_g55285_i0forward_frame_3 - 0.065 13.3 0.0 0.069 13.2 0.0 1.1 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2269) Chordopox_A30L PF06015.12 NODE_63225_length_256_cov_59.108597_g55284_i0reverse_frame_2 - 0.043 13.7 3.1 0.054 13.3 3.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus A30L protein SURF4 PF02077.15 NODE_63223_length_256_cov_63.067873_g55282_i0reverse_frame_3 - 0.056 13.0 0.3 0.062 12.9 0.3 1.0 1 0 0 1 1 1 0 SURF4 family VDE PF07137.11 NODE_63219_length_256_cov_73.113122_g55278_i0forward_frame_2 - 0.073 12.6 0.0 0.084 12.4 0.0 1.0 1 0 0 1 1 1 0 VDE lipocalin domain Sugar_tr PF00083.24 NODE_63216_length_256_cov_77.352941_g55275_i0reverse_frame_3 - 0.049 12.5 0.1 0.049 12.5 0.1 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter HgmA PF04209.13 NODE_63214_length_256_cov_84.434389_g55273_i0reverse_frame_3 - 0.24 10.1 0.0 0.26 10.0 0.0 1.0 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase SpoVIF PF14069.6 NODE_63212_length_256_cov_91.592760_g55271_i0reverse_frame_3 - 0.03 14.1 2.4 0.044 13.6 2.4 1.5 1 1 0 1 1 1 0 Stage VI sporulation protein F ATP-cone PF03477.16 NODE_63212_length_256_cov_91.592760_g55271_i0reverse_frame_3 - 0.04 14.5 1.4 0.051 14.1 1.4 1.2 1 0 0 1 1 1 0 ATP cone domain HK_sensor PF16750.5 NODE_63212_length_256_cov_91.592760_g55271_i0reverse_frame_3 - 0.056 13.7 0.0 0.068 13.5 0.0 1.1 1 0 0 1 1 1 0 Sensor domain of 2-component histidine kinase DUF3704 PF12488.8 NODE_63211_length_256_cov_98.538462_g55270_i0forward_frame_2 - 0.14 11.9 0.6 18 5.1 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3704) ETRAMP PF09716.10 NODE_63211_length_256_cov_98.538462_g55270_i0forward_frame_2 - 0.24 11.5 0.2 0.24 11.5 0.2 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Csa1 PF06023.12 NODE_63210_length_256_cov_101.443439_g55269_i0forward_frame_2 - 0.19 11.1 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated exonuclease Csa1 Sid-5 PF17204.3 NODE_63209_length_256_cov_103.841629_g55268_i0reverse_frame_2 - 0.044 13.9 0.4 0.069 13.3 0.4 1.2 1 0 0 1 1 1 0 Sid-5 family Ufm1 PF03671.14 NODE_63208_length_256_cov_106.895928_g55267_i0reverse_frame_2 - 0.12 12.5 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin fold modifier 1 protein zf-C3HC4_3 PF13920.6 NODE_63205_length_256_cov_111.018100_g55264_i0forward_frame_3 - 0.31 11.0 8.1 2.6 8.0 0.6 2.4 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Spo12 PF05032.12 NODE_63205_length_256_cov_111.018100_g55264_i0forward_frame_3 - 3 7.8 5.3 0.8 9.7 2.2 1.6 2 0 0 2 2 2 0 Spo12 family Say1_Mug180 PF10340.9 NODE_63204_length_256_cov_111.796380_g55263_i0forward_frame_2 - 0.02 13.8 0.1 0.021 13.7 0.1 1.1 1 0 0 1 1 1 0 Steryl acetyl hydrolase KCT2 PF17818.1 NODE_63201_length_256_cov_126.909502_g55260_i0reverse_frame_3 - 0.071 13.2 0.5 0.098 12.8 0.5 1.2 1 0 0 1 1 1 0 Keratinocyte-associated gene product Colipase-like PF15083.6 NODE_63198_length_256_cov_135.805430_g55257_i0forward_frame_3 - 0.069 13.3 2.8 0.1 12.8 2.8 1.3 1 0 0 1 1 1 0 Colipase-like ST7 PF04184.12 NODE_63197_length_256_cov_137.796380_g55256_i0forward_frame_2 - 0.078 11.4 0.1 0.081 11.4 0.1 1.0 1 0 0 1 1 1 0 ST7 protein PPP1R32 PF15691.5 NODE_63196_length_256_cov_142.515837_g55255_i0reverse_frame_3 - 0.15 11.1 0.0 0.17 11.0 0.0 1.0 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 32 MCR_beta PF02241.18 NODE_63192_length_256_cov_240.547511_g55251_i0forward_frame_2 - 0.25 10.9 0.0 0.35 10.4 0.0 1.2 1 0 0 1 1 1 0 Methyl-coenzyme M reductase beta subunit, C-terminal domain RskA PF10099.9 NODE_63189_length_256_cov_323.628959_g55248_i0reverse_frame_3 - 1.8 8.8 8.9 2.3 8.5 8.9 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF3915 PF13054.6 NODE_63189_length_256_cov_323.628959_g55248_i0reverse_frame_3 - 2 8.4 5.8 0.7 9.9 2.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3915) zf-RING_5 PF14634.6 NODE_63189_length_256_cov_323.628959_g55248_i0reverse_frame_2 - 2.1e-05 24.4 1.1 2.9e-05 23.9 1.1 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_63189_length_256_cov_323.628959_g55248_i0reverse_frame_2 - 0.032 14.1 0.4 0.049 13.5 0.4 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_63189_length_256_cov_323.628959_g55248_i0reverse_frame_2 - 0.036 13.9 0.6 0.047 13.6 0.6 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Methyltransf_3 PF01596.17 NODE_63188_length_256_cov_413.927602_g55247_i0reverse_frame_3 - 1.1e-18 67.3 0.1 1.2e-18 67.1 0.1 1.0 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 NODE_63188_length_256_cov_413.927602_g55247_i0reverse_frame_3 - 0.16 13.0 0.0 0.28 12.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain HCV_NS2 PF01538.18 NODE_63186_length_256_cov_1146.954751_g55245_i0forward_frame_2 - 0.0013 18.5 0.6 0.0014 18.3 0.6 1.0 1 0 0 1 1 1 1 Hepatitis C virus non-structural protein NS2 ENOD40 PF08247.11 NODE_63183_length_257_cov_0.837838_g55242_i0reverse_frame_3 - 0.41 10.7 3.9 17 5.7 0.3 2.7 2 0 0 2 2 2 0 ENOD40 protein Peptidase_M16 PF00675.20 NODE_63183_length_257_cov_0.837838_g55242_i0reverse_frame_2 - 9e-24 84.1 0.0 1e-23 84.0 0.0 1.0 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Hemocyanin_C PF03723.14 NODE_63182_length_257_cov_0.936937_g55241_i0forward_frame_3 - 0.02 14.2 0.1 0.023 14.1 0.1 1.1 1 0 0 1 1 1 0 Hemocyanin, ig-like domain DASH_Dam1 PF08653.10 NODE_63181_length_257_cov_0.963964_g55240_i0reverse_frame_3 - 0.0063 16.3 0.1 0.0093 15.7 0.1 1.3 1 0 0 1 1 1 1 DASH complex subunit Dam1 DUF4679 PF15728.5 NODE_63180_length_257_cov_0.977477_g55239_i0forward_frame_3 - 0.27 10.2 1.7 0.32 10.0 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) UCR_hinge PF02320.16 NODE_63172_length_257_cov_1.081081_g55231_i0forward_frame_3 - 0.064 13.5 7.2 0.083 13.1 7.2 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein DNA_pol3_delta2 PF13177.6 NODE_63171_length_257_cov_1.081081_g55230_i0forward_frame_3 - 0.045 13.5 0.0 0.049 13.4 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Phasin_2 PF09361.10 NODE_63168_length_257_cov_1.126126_g55227_i0reverse_frame_2 - 0.045 14.0 0.1 0.068 13.4 0.1 1.2 1 0 0 1 1 1 0 Phasin protein DNA_pol_E_B PF04042.16 NODE_63168_length_257_cov_1.126126_g55227_i0reverse_frame_2 - 0.081 12.3 0.0 0.088 12.1 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B Importin_rep_3 PF18806.1 NODE_63168_length_257_cov_1.126126_g55227_i0reverse_frame_2 - 0.087 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Importin 13 repeat APOBEC4 PF18775.1 NODE_63167_length_257_cov_1.171171_g55226_i0forward_frame_2 - 0.045 13.9 0.3 0.052 13.7 0.3 1.2 1 0 0 1 1 1 0 APOBEC4 CoA_transf_3 PF02515.17 NODE_63166_length_257_cov_1.220721_g55225_i0forward_frame_3 - 2e-11 43.6 0.2 2.3e-11 43.5 0.2 1.0 1 0 0 1 1 1 1 CoA-transferase family III FANC_SAP PF18081.1 NODE_63166_length_257_cov_1.220721_g55225_i0forward_frame_3 - 0.00048 20.2 1.4 0.01 16.0 0.3 2.1 2 0 0 2 2 2 2 Fanconi anemia-associated nuclease SAP domain PIP49_C PF12260.8 NODE_63161_length_257_cov_1.342342_g55220_i0forward_frame_3 - 1 9.0 3.4 1.2 8.8 3.4 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 Phage-tail_3 PF13550.6 NODE_63161_length_257_cov_1.342342_g55220_i0forward_frame_2 - 0.024 14.5 2.4 0.026 14.4 2.4 1.1 1 0 0 1 1 1 0 Putative phage tail protein HECT PF00632.25 NODE_63156_length_257_cov_1.427928_g55215_i0forward_frame_2 - 1.1e-12 48.1 1.5 3.3e-07 30.1 0.1 2.0 1 1 1 2 2 2 2 HECT-domain (ubiquitin-transferase) Tme5_EGF_like PF09064.10 NODE_63153_length_257_cov_1.450450_g55212_i0reverse_frame_2 - 0.019 14.9 3.5 0.033 14.1 3.5 1.3 1 0 0 1 1 1 0 Thrombomodulin like fifth domain, EGF-like FXa_inhibition PF14670.6 NODE_63153_length_257_cov_1.450450_g55212_i0reverse_frame_2 - 0.068 13.5 3.5 0.1 12.9 3.5 1.3 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site E_raikovi_mat PF06360.11 NODE_63153_length_257_cov_1.450450_g55212_i0reverse_frame_2 - 0.29 11.6 2.8 0.44 11.0 2.8 1.2 1 0 0 1 1 1 0 Euplotes raikovi mating pheromone GP40 PF11025.8 NODE_63153_length_257_cov_1.450450_g55212_i0forward_frame_3 - 0.24 11.1 0.0 0.29 10.9 0.0 1.1 1 0 0 1 1 1 0 Glycoprotein GP40 of Cryptosporidium Copper-fist PF00649.18 NODE_63143_length_257_cov_1.563063_g55202_i0forward_frame_2 - 0.11 12.1 0.9 0.11 12.1 0.9 1.6 2 0 0 2 2 2 0 Copper fist DNA binding domain Cyclin PF08613.11 NODE_63141_length_257_cov_1.621622_g55200_i0reverse_frame_2 - 2.9e-05 24.5 0.4 3e-05 24.4 0.4 1.1 1 0 0 1 1 1 1 Cyclin BCL9 PF11502.8 NODE_63141_length_257_cov_1.621622_g55200_i0forward_frame_2 - 0.19 11.5 0.0 0.3 10.9 0.0 1.2 1 0 0 1 1 1 0 B-cell lymphoma 9 protein Imm51 PF15595.6 NODE_63139_length_257_cov_1.653153_g55198_i0forward_frame_3 - 0.0039 17.1 0.5 0.0046 16.9 0.5 1.1 1 0 0 1 1 1 1 Immunity protein 51 ALG3 PF05208.13 NODE_63138_length_257_cov_1.671171_g55197_i0reverse_frame_3 - 8.5e-11 41.9 0.1 9.8e-11 41.7 0.1 1.1 1 0 0 1 1 1 1 ALG3 protein CRF PF00473.17 NODE_63138_length_257_cov_1.671171_g55197_i0reverse_frame_3 - 0.055 13.5 0.0 0.082 13.0 0.0 1.3 1 0 0 1 1 1 0 Corticotropin-releasing factor family Vault_2 PF17794.1 NODE_63137_length_257_cov_1.689189_g55196_i0forward_frame_2 - 0.093 13.1 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Major Vault Protein repeat domain Mito_fiss_reg PF05308.11 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_3 - 0.00047 20.3 3.9 0.00055 20.1 3.9 1.0 1 0 0 1 1 1 1 Mitochondrial fission regulator CAP_N PF01213.19 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_3 - 0.031 13.8 7.4 0.04 13.4 7.4 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal K_channel_TID PF07941.11 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_3 - 10 6.7 20.0 6.1 7.4 1.6 2.2 2 0 0 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain Plant_vir_prot PF01307.17 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_2 - 0.0018 18.5 2.6 0.0032 17.7 2.6 1.4 1 1 0 1 1 1 1 Plant viral movement protein RIFIN PF02009.16 NODE_63135_length_257_cov_1.734234_g55194_i0reverse_frame_2 - 0.24 11.2 3.0 0.3 10.9 3.0 1.1 1 0 0 1 1 1 0 Rifin DUF1676 PF07898.13 NODE_63135_length_257_cov_1.734234_g55194_i0forward_frame_3 - 0.024 14.7 7.2 0.029 14.4 7.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) TraG_N PF07916.11 NODE_63135_length_257_cov_1.734234_g55194_i0forward_frame_3 - 1 8.1 7.8 1.1 8.0 7.8 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF4148 PF13663.6 NODE_63135_length_257_cov_1.734234_g55194_i0forward_frame_2 - 0.55 10.5 8.6 5.9 7.2 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) RFX_DNA_binding PF02257.15 NODE_63134_length_257_cov_1.738739_g55193_i0forward_frame_3 - 0.058 14.0 1.6 3.2 8.5 0.1 2.1 2 0 0 2 2 2 0 RFX DNA-binding domain ABC_tran PF00005.27 NODE_63133_length_257_cov_1.765766_g55192_i0forward_frame_2 - 0.0011 19.5 0.0 0.0018 18.8 0.0 1.3 1 1 0 1 1 1 1 ABC transporter C2-C2_1 PF11618.8 NODE_63130_length_257_cov_1.792793_g55189_i0forward_frame_2 - 0.0037 17.4 0.1 0.004 17.2 0.1 1.0 1 0 0 1 1 1 1 First C2 domain of RPGR-interacting protein 1 DHHC PF01529.20 NODE_63124_length_257_cov_1.905405_g55183_i0forward_frame_2 - 9.9e-26 90.4 0.5 1.1e-25 90.3 0.5 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase PV-1 PF06637.11 NODE_63124_length_257_cov_1.905405_g55183_i0forward_frame_2 - 0.02 13.7 0.1 0.021 13.7 0.1 1.1 1 0 0 1 1 1 0 PV-1 protein (PLVAP) TMEM215 PF15746.5 NODE_63114_length_257_cov_2.072072_g55173_i0reverse_frame_2 - 0.012 15.1 0.1 0.012 15.0 0.1 1.1 1 0 0 1 1 1 0 TMEM215 family MIF4G PF02854.19 NODE_63114_length_257_cov_2.072072_g55173_i0forward_frame_3 - 0.13 11.8 0.9 0.16 11.6 0.9 1.1 1 0 0 1 1 1 0 MIF4G domain YgbA_NO PF11756.8 NODE_63113_length_257_cov_2.090090_g55172_i0reverse_frame_2 - 1.5 9.2 11.7 0.57 10.6 9.3 1.7 1 1 0 1 1 1 0 Nitrous oxide-stimulated promoter PolC_DP2 PF03833.13 NODE_63113_length_257_cov_2.090090_g55172_i0reverse_frame_2 - 4.6 5.0 5.0 4.2 5.1 5.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 SesA PF17107.5 NODE_63106_length_257_cov_2.225225_g55165_i0reverse_frame_2 - 0.0051 17.0 0.1 0.0063 16.7 0.1 1.0 1 0 0 1 1 1 1 N-terminal domain on NACHT_NTPase and P-loop NTPases HemN_C PF06969.16 NODE_63106_length_257_cov_2.225225_g55165_i0forward_frame_2 - 0.037 14.1 0.1 0.062 13.4 0.0 1.5 2 0 0 2 2 2 0 HemN C-terminal domain T2SSS_2 PF16549.5 NODE_63104_length_257_cov_2.279279_g55163_i0reverse_frame_2 - 4.5e-11 42.7 0.2 4.9e-11 42.6 0.2 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS) pilotin, S protein Rib_5-P_isom_A PF06026.14 NODE_63101_length_257_cov_2.297297_g55160_i0reverse_frame_3 - 4.3e-08 33.0 0.1 5.4e-08 32.6 0.1 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 NODE_63101_length_257_cov_2.297297_g55160_i0reverse_frame_3 - 0.00026 21.0 0.0 0.00028 20.9 0.0 1.2 1 0 0 1 1 1 1 DeoR C terminal sensor domain Sugar-bind PF04198.13 NODE_63101_length_257_cov_2.297297_g55160_i0reverse_frame_3 - 0.053 12.7 0.1 0.053 12.7 0.1 1.1 1 0 0 1 1 1 0 Putative sugar-binding domain S1 PF00575.23 NODE_63099_length_257_cov_2.418919_g55158_i0reverse_frame_2 - 5.9e-10 39.4 0.0 7e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 S1 RNA binding domain PilZ PF07238.14 NODE_63099_length_257_cov_2.418919_g55158_i0reverse_frame_2 - 0.021 15.1 0.0 0.021 15.1 0.0 1.3 1 0 0 1 1 1 0 PilZ domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks315.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks315.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks315.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks315.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Glyco_hydro_53 PF07745.13 NODE_63091_length_257_cov_2.644144_g55150_i0reverse_frame_2 - 0.23 10.4 0.0 0.27 10.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 53 Entericidin PF08085.11 NODE_63090_length_257_cov_2.666667_g55149_i0reverse_frame_3 - 0.064 13.3 0.1 0.064 13.3 0.1 1.6 2 0 0 2 2 2 0 Entericidin EcnA/B family NTP_transf_3 PF12804.7 NODE_63090_length_257_cov_2.666667_g55149_i0reverse_frame_2 - 0.088 13.2 0.0 0.1 12.9 0.0 1.0 1 0 0 1 1 1 0 MobA-like NTP transferase domain 7tm_7 PF08395.12 NODE_63084_length_257_cov_3.067568_g55143_i0reverse_frame_3 - 0.018 14.3 0.2 0.019 14.2 0.2 1.0 1 0 0 1 1 1 0 7tm Chemosensory receptor DUF2254 PF10011.9 NODE_63084_length_257_cov_3.067568_g55143_i0reverse_frame_3 - 0.061 12.1 0.3 0.063 12.1 0.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) YlaH PF14036.6 NODE_63084_length_257_cov_3.067568_g55143_i0reverse_frame_3 - 0.088 13.1 1.8 1.3 9.4 1.7 2.0 1 1 0 1 1 1 0 YlaH-like protein ATP_synt_H PF05493.13 NODE_63084_length_257_cov_3.067568_g55143_i0reverse_frame_2 - 0.24 11.9 2.2 0.34 11.4 2.2 1.3 1 0 0 1 1 1 0 ATP synthase subunit H ATP-grasp_2 PF08442.10 NODE_63083_length_257_cov_3.184685_g55142_i0reverse_frame_3 - 2.6e-36 125.1 0.2 2.8e-36 125.0 0.2 1.0 1 0 0 1 1 1 1 ATP-grasp domain DUF1664 PF07889.12 NODE_63083_length_257_cov_3.184685_g55142_i0forward_frame_2 - 0.025 14.6 0.1 0.051 13.6 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) UPF0506 PF11703.8 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_3 - 2.5 8.5 17.6 0.9 10.0 10.5 2.2 1 1 1 2 2 2 0 UPF0506 Omega-toxin PF06357.11 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_3 - 3.2 7.6 11.9 1.2 9.0 6.8 2.4 2 0 0 2 2 2 0 Omega-atracotoxin Dickkopf_N PF04706.12 NODE_63080_length_257_cov_3.490991_g55139_i0reverse_frame_3 - 5.4 7.6 17.4 0.2 12.2 9.9 2.1 2 1 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region ESR1_C PF12743.7 NODE_63074_length_257_cov_4.265766_g55133_i0forward_frame_3 - 0.23 11.3 0.8 20 5.1 0.2 2.1 2 0 0 2 2 2 0 Oestrogen-type nuclear receptor final C-terminal Antistasin PF02822.14 NODE_63072_length_257_cov_7.238739_g55131_i0forward_frame_2 - 0.072 13.7 0.0 0.1 13.3 0.0 1.2 1 0 0 1 1 1 0 Antistasin family LRR19-TM PF15176.6 NODE_63070_length_257_cov_17.054054_g55129_i0reverse_frame_2 - 7.6 6.6 6.0 2.2 8.3 2.9 1.7 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain Spore-coat_CotZ PF10612.9 NODE_63070_length_257_cov_17.054054_g55129_i0forward_frame_3 - 0.16 12.1 0.7 0.18 12.0 0.7 1.1 1 0 0 1 1 1 0 Spore coat protein Z YlaC PF10777.9 NODE_63070_length_257_cov_17.054054_g55129_i0forward_frame_3 - 0.2 11.5 5.9 0.24 11.3 5.9 1.2 1 0 0 1 1 1 0 Inner membrane protein YlaC UPF0730 PF15827.5 NODE_63068_length_257_cov_24.648649_g55127_i0reverse_frame_2 - 0.009 15.7 1.1 0.015 15.0 1.1 1.4 1 0 0 1 1 1 1 UPF0730 unknown protein family DUF5039 PF16442.5 NODE_63067_length_257_cov_26.292793_g55126_i0reverse_frame_3 - 0.0085 15.7 1.2 0.0093 15.5 1.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5039) DUF1722 PF08349.11 NODE_63067_length_257_cov_26.292793_g55126_i0reverse_frame_3 - 0.022 15.0 2.2 0.027 14.8 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) IATP PF04568.12 NODE_63067_length_257_cov_26.292793_g55126_i0reverse_frame_3 - 0.22 12.0 1.4 0.36 11.3 1.4 1.3 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP FapA PF03961.13 NODE_63067_length_257_cov_26.292793_g55126_i0reverse_frame_3 - 0.44 9.1 1.8 0.45 9.0 1.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A RIH_assoc PF08454.11 NODE_63066_length_257_cov_29.563063_g55125_i0reverse_frame_3 - 0.022 14.6 1.7 0.037 13.9 1.7 1.3 1 0 0 1 1 1 0 RyR and IP3R Homology associated Auxin_canalis PF05703.11 NODE_63066_length_257_cov_29.563063_g55125_i0reverse_frame_3 - 0.089 12.7 0.3 0.09 12.7 0.3 1.0 1 0 0 1 1 1 0 Auxin canalisation Herpes_UL36 PF03586.13 NODE_63066_length_257_cov_29.563063_g55125_i0reverse_frame_3 - 0.1 11.9 0.2 0.1 11.9 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL36 tegument protein DUF3794 PF12673.7 NODE_63065_length_257_cov_36.153153_g55124_i0forward_frame_2 - 0.084 13.2 0.2 0.1 12.9 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3794) Ion_trans PF00520.31 NODE_63062_length_257_cov_49.243243_g55121_i0reverse_frame_3 - 0.017 14.4 0.2 0.018 14.3 0.2 1.1 1 0 0 1 1 1 0 Ion transport protein CH_2 PF06294.11 NODE_63060_length_257_cov_51.716216_g55119_i0reverse_frame_3 - 8.6e-09 35.4 0.1 1.2e-08 34.9 0.1 1.2 1 0 0 1 1 1 1 CH-like domain in sperm protein Avl9 PF09794.9 NODE_63060_length_257_cov_51.716216_g55119_i0forward_frame_3 - 0.13 10.9 0.1 0.15 10.7 0.1 1.0 1 0 0 1 1 1 0 Transport protein Avl9 Eno-Rase_FAD_bd PF07055.12 NODE_63052_length_257_cov_60.409910_g55111_i0reverse_frame_3 - 0.025 15.0 0.2 0.039 14.4 0.2 1.3 1 0 0 1 1 1 0 Enoyl reductase FAD binding domain XPG_I_2 PF12813.7 NODE_63052_length_257_cov_60.409910_g55111_i0reverse_frame_3 - 0.092 12.2 2.7 0.088 12.3 2.7 1.1 1 0 0 1 1 1 0 XPG domain containing SBDS_C PF09377.10 NODE_63052_length_257_cov_60.409910_g55111_i0reverse_frame_3 - 2.3 8.2 6.9 2.7 8.0 6.9 1.0 1 0 0 1 1 1 0 SBDS protein C-terminal domain Diedel PF13164.6 NODE_63048_length_257_cov_66.657658_g55107_i0forward_frame_2 - 0.055 13.9 0.4 0.067 13.6 0.4 1.1 1 0 0 1 1 1 0 Diedel Fer4_4 PF12800.7 NODE_63047_length_257_cov_66.972973_g55106_i0forward_frame_3 - 6.2 7.6 8.9 12 6.7 4.1 2.3 1 1 1 2 2 2 0 4Fe-4S binding domain DUF4801 PF16059.5 NODE_63040_length_257_cov_83.031532_g55099_i0forward_frame_3 - 0.053 13.5 0.6 0.053 13.5 0.6 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4801) GAD-like PF08887.11 NODE_63033_length_257_cov_94.963964_g55092_i0reverse_frame_2 - 0.13 12.0 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 GAD-like domain Abhydrolase_8 PF06259.12 NODE_63033_length_257_cov_94.963964_g55092_i0forward_frame_2 - 0.044 13.4 0.0 0.048 13.3 0.0 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase zf-RING_4 PF14570.6 NODE_63032_length_257_cov_98.567568_g55091_i0reverse_frame_3 - 0.025 14.3 1.6 0.036 13.9 1.6 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Mei4 PF13971.6 NODE_63031_length_257_cov_100.481982_g55090_i0reverse_frame_3 - 0.23 10.9 1.3 0.25 10.8 1.3 1.0 1 0 0 1 1 1 0 Meiosis-specific protein Mei4 PKD PF00801.20 NODE_63029_length_257_cov_108.270270_g55088_i0reverse_frame_2 - 0.033 14.0 0.7 0.11 12.4 0.5 1.8 1 1 1 2 2 2 0 PKD domain Ependymin PF00811.18 NODE_63029_length_257_cov_108.270270_g55088_i0reverse_frame_2 - 0.086 13.1 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Ependymin DUF4957 PF16318.5 NODE_63029_length_257_cov_108.270270_g55088_i0forward_frame_2 - 0.13 12.2 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) Ycf4 PF02392.16 NODE_63028_length_257_cov_111.977477_g55087_i0reverse_frame_3 - 0.19 11.3 0.1 0.21 11.1 0.1 1.1 1 0 0 1 1 1 0 Ycf4 DUF4633 PF15464.6 NODE_63026_length_257_cov_114.364865_g55085_i0reverse_frame_2 - 0.16 12.2 0.6 0.19 11.8 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4633) DUF2157 PF09925.9 NODE_63025_length_257_cov_117.747748_g55084_i0reverse_frame_2 - 0.045 13.5 0.1 0.059 13.2 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Phage_T7_tail PF03906.14 NODE_63022_length_257_cov_132.085586_g55081_i0reverse_frame_2 - 0.13 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Phage T7 tail fibre protein HAP2-GCS1 PF10699.9 NODE_63022_length_257_cov_132.085586_g55081_i0forward_frame_2 - 0.072 13.1 1.4 0.13 12.3 0.8 1.9 2 1 0 2 2 2 0 Male gamete fusion factor Histone_H2A_C PF16211.5 NODE_63019_length_257_cov_165.333333_g55078_i0forward_frame_3 - 1.6 8.5 6.7 2.8 7.7 6.7 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A Rho_RNA_bind PF07497.12 NODE_63019_length_257_cov_165.333333_g55078_i0forward_frame_2 - 0.079 12.8 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain ARF7EP_C PF14949.6 NODE_63018_length_257_cov_211.711712_g55077_i0reverse_frame_3 - 0.028 15.0 2.5 0.04 14.5 2.5 1.2 1 0 0 1 1 1 0 ARF7 effector protein C-terminus Rtf2 PF04641.12 NODE_63017_length_257_cov_242.963964_g55076_i0forward_frame_2 - 0.48 9.7 2.5 0.44 9.9 2.5 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger oligo_HPY PF08352.12 NODE_63013_length_257_cov_6386.306306_g55072_i0reverse_frame_3 - 0.39 11.3 2.0 1.1 9.9 2.0 2.0 1 1 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region UNC119_bdg PF15435.6 NODE_63012_length_257_cov_8053.288288_g55071_i0forward_frame_2 - 0.066 12.7 0.0 0.093 12.3 0.0 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue He_PIG PF05345.12 NODE_63007_length_258_cov_1.044843_g55066_i0forward_frame_3 - 1.6 8.9 18.2 0.49 10.6 11.0 2.8 1 1 1 2 2 2 0 Putative Ig domain TMIE PF16038.5 NODE_63006_length_258_cov_1.058296_g55065_i0forward_frame_2 - 0.62 9.9 8.8 0.71 9.7 8.6 1.5 1 1 0 1 1 1 0 TMIE protein Ipi1_N PF12333.8 NODE_62998_length_258_cov_1.219731_g55057_i0reverse_frame_3 - 0.02 15.5 0.2 0.057 14.0 0.2 1.8 1 1 0 1 1 1 0 Rix1 complex component involved in 60S ribosome maturation CT47 PF15623.6 NODE_62994_length_258_cov_1.309417_g55053_i0reverse_frame_3 - 0.24 11.2 0.1 0.29 10.9 0.1 1.0 1 0 0 1 1 1 0 Cancer/testis gene family 47 RVT_2 PF07727.14 NODE_62992_length_258_cov_1.354260_g55051_i0reverse_frame_2 - 1.3e-07 31.6 0.0 1.4e-07 31.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) HTH_23 PF13384.6 NODE_62992_length_258_cov_1.354260_g55051_i0reverse_frame_2 - 0.016 15.0 0.0 0.033 14.0 0.0 1.6 2 0 0 2 2 2 0 Homeodomain-like domain TCL1_MTCP1 PF01840.17 NODE_62989_length_258_cov_1.376682_g55048_i0forward_frame_2 - 0.072 12.7 0.2 0.079 12.6 0.2 1.1 1 0 0 1 1 1 0 TCL1/MTCP1 family Ras PF00071.22 NODE_62984_length_258_cov_1.452915_g55043_i0reverse_frame_2 - 3.4e-13 49.5 0.0 5.1e-13 48.9 0.0 1.3 1 0 0 1 1 1 1 Ras family Aa_trans PF01490.18 NODE_62983_length_258_cov_1.457399_g55042_i0forward_frame_3 - 0.0024 16.6 5.4 0.0025 16.6 5.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 NODE_62983_length_258_cov_1.457399_g55042_i0forward_frame_3 - 0.0025 16.9 3.5 0.0029 16.7 3.5 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DHHC PF01529.20 NODE_62983_length_258_cov_1.457399_g55042_i0forward_frame_3 - 0.043 13.9 4.1 0.049 13.7 4.1 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase YrhC PF14143.6 NODE_62982_length_258_cov_1.461883_g55041_i0reverse_frame_3 - 0.097 12.8 0.5 0.14 12.3 0.5 1.2 1 0 0 1 1 1 0 YrhC-like protein SMP_C2CD2L PF18696.1 NODE_62979_length_258_cov_1.533632_g55038_i0reverse_frame_2 - 0.0095 15.8 0.1 0.011 15.6 0.1 1.0 1 0 0 1 1 1 1 Synaptotagmin-like, mitochondrial and lipid-binding domain MMR_HSR1 PF01926.23 NODE_62979_length_258_cov_1.533632_g55038_i0forward_frame_3 - 1.3e-06 28.5 0.0 1.5e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase XTBD PF11952.8 NODE_62979_length_258_cov_1.533632_g55038_i0forward_frame_2 - 0.0091 15.7 0.1 0.0096 15.7 0.1 1.2 1 0 0 1 1 1 1 XRN-Two Binding Domain, XTBD Babuvirus_MP PF07234.11 NODE_62978_length_258_cov_1.538117_g55037_i0reverse_frame_3 - 0.63 10.2 3.2 0.54 10.4 2.0 1.4 1 1 0 1 1 1 0 Movement and RNA silencing protein WD40 PF00400.32 NODE_62971_length_258_cov_1.677130_g55030_i0reverse_frame_3 - 0.00041 21.1 0.1 0.00072 20.3 0.0 1.6 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_62971_length_258_cov_1.677130_g55030_i0reverse_frame_3 - 0.012 15.9 0.0 0.023 15.0 0.0 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain RL PF17797.1 NODE_62971_length_258_cov_1.677130_g55030_i0reverse_frame_3 - 0.041 13.8 0.0 0.12 12.3 0.0 1.7 2 0 0 2 2 2 0 RL domain SPECT1 PF18680.1 NODE_62967_length_258_cov_1.730942_g55026_i0reverse_frame_2 - 0.067 12.9 1.2 0.074 12.7 1.2 1.1 1 0 0 1 1 1 0 Plasmodium host cell traversal SPECT1 HypF_C PF17788.1 NODE_62966_length_258_cov_1.730942_g55025_i0forward_frame_3 - 0.11 13.2 0.0 0.13 13.0 0.0 1.1 1 0 0 1 1 1 0 HypF Kae1-like domain Utp14 PF04615.13 NODE_62964_length_258_cov_1.762332_g55023_i0reverse_frame_3 - 1.5e-07 30.4 1.0 1.7e-07 30.3 1.0 1.0 1 0 0 1 1 1 1 Utp14 protein IL4Ra_N PF09238.10 NODE_62964_length_258_cov_1.762332_g55023_i0forward_frame_3 - 0.097 13.0 1.7 0.12 12.8 1.7 1.2 1 0 0 1 1 1 0 Interleukin-4 receptor alpha chain, N-terminal RR_TM4-6 PF06459.12 NODE_62962_length_258_cov_1.775785_g55021_i0forward_frame_3 - 0.13 12.1 0.2 0.18 11.6 0.2 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Vps23_core PF09454.10 NODE_62962_length_258_cov_1.775785_g55021_i0forward_frame_2 - 0.013 15.5 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 Vps23 core domain CD225 PF04505.12 NODE_62961_length_258_cov_1.780269_g55020_i0reverse_frame_2 - 0.33 11.1 5.5 1.1 9.4 5.5 1.9 1 1 0 1 1 1 0 Interferon-induced transmembrane protein GNAT_like PF18407.1 NODE_62960_length_258_cov_1.784753_g55019_i0reverse_frame_3 - 0.02 15.2 0.8 0.02 15.2 0.8 2.0 1 1 1 2 2 2 0 GCN5-related N-acetyltransferase like domain PAXIP1_C PF15364.6 NODE_62959_length_258_cov_1.811659_g55018_i0reverse_frame_2 - 0.069 13.5 7.3 0.078 13.3 7.3 1.0 1 0 0 1 1 1 0 PAXIP1-associated-protein-1 C term PTIP binding protein Anoctamin PF04547.12 NODE_62956_length_258_cov_1.825112_g55015_i0forward_frame_2 - 0.00028 19.9 0.1 0.00028 19.9 0.1 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel DUF5488 PF17590.2 NODE_62956_length_258_cov_1.825112_g55015_i0forward_frame_2 - 0.023 14.4 0.3 0.17 11.6 0.0 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5488) TMEM18 PF14770.6 NODE_62956_length_258_cov_1.825112_g55015_i0forward_frame_2 - 0.062 13.3 0.2 0.069 13.2 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 DUF3465 PF11948.8 NODE_62956_length_258_cov_1.825112_g55015_i0forward_frame_2 - 0.15 12.0 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3465) DNA_methylase PF00145.17 NODE_62955_length_258_cov_1.847534_g55014_i0reverse_frame_2 - 0.059 12.7 0.0 0.06 12.7 0.0 1.1 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Pox_T4_C PF04490.12 NODE_62953_length_258_cov_1.883408_g55012_i0reverse_frame_3 - 0.079 13.1 0.1 0.099 12.8 0.1 1.2 1 0 0 1 1 1 0 Poxvirus T4 protein, C terminus TMEM154 PF15102.6 NODE_62949_length_258_cov_1.937220_g55008_i0forward_frame_3 - 0.017 15.0 2.7 0.019 14.9 2.7 1.1 1 0 0 1 1 1 0 TMEM154 protein family Peptidase_S74 PF13884.6 NODE_62949_length_258_cov_1.937220_g55008_i0forward_frame_2 - 0.026 14.9 0.7 0.047 14.0 0.7 1.4 1 0 0 1 1 1 0 Chaperone of endosialidase CAP_C PF08603.11 NODE_62948_length_258_cov_1.955157_g55007_i0reverse_frame_3 - 0.011 15.4 0.6 0.013 15.2 0.6 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) C terminal zf-C2H2_12 PF18658.1 NODE_62945_length_258_cov_1.991031_g55004_i0forward_frame_3 - 0.48 10.0 5.4 0.73 9.5 5.4 1.3 1 0 0 1 1 1 0 Zinc-finger C2H2-type Tat PF00539.18 NODE_62944_length_258_cov_1.995516_g55003_i0forward_frame_2 - 0.14 12.3 1.8 0.15 12.3 1.1 1.6 1 1 1 2 2 2 0 Transactivating regulatory protein (Tat) SHQ1 PF04925.15 NODE_62943_length_258_cov_2.013453_g55002_i0forward_frame_2 - 0.13 11.8 0.1 0.16 11.5 0.1 1.1 1 0 0 1 1 1 0 SHQ1 protein DUF3519 PF12033.8 NODE_62942_length_258_cov_2.017937_g55001_i0reverse_frame_3 - 0.043 14.2 1.0 0.061 13.7 1.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3519) Endonuclease_7 PF02945.15 NODE_62942_length_258_cov_2.017937_g55001_i0reverse_frame_2 - 0.018 15.0 0.6 0.019 14.9 0.6 1.2 1 0 0 1 1 1 0 Recombination endonuclease VII Spc7_C2 PF15577.6 NODE_62942_length_258_cov_2.017937_g55001_i0forward_frame_2 - 0.12 12.4 0.1 0.4 10.8 0.0 1.7 2 0 0 2 2 2 0 Spc7_C2 DASH_Dad4 PF08650.10 NODE_62940_length_258_cov_2.053812_g54999_i0reverse_frame_3 - 0.0083 16.1 1.2 0.015 15.3 1.1 1.5 1 1 0 1 1 1 1 DASH complex subunit Dad4 Myelin_PLP PF01275.19 NODE_62938_length_258_cov_2.125561_g54997_i0reverse_frame_3 - 0.089 12.6 1.8 0.1 12.5 1.8 1.1 1 0 0 1 1 1 0 Myelin proteolipid protein (PLP or lipophilin) DUF4596 PF15363.6 NODE_62937_length_258_cov_2.139013_g54996_i0reverse_frame_2 - 0.38 11.0 4.2 0.54 10.5 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4596) HypA PF01155.19 NODE_62937_length_258_cov_2.139013_g54996_i0forward_frame_3 - 0.55 10.3 5.2 0.62 10.1 5.2 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AAA_PrkA PF08298.11 NODE_62936_length_258_cov_2.147982_g54995_i0reverse_frame_2 - 6.8e-37 127.2 0.0 7.3e-37 127.1 0.0 1.0 1 0 0 1 1 1 1 PrkA AAA domain tRNA_bind_2 PF13725.6 NODE_62936_length_258_cov_2.147982_g54995_i0reverse_frame_2 - 0.089 12.5 0.0 3 7.5 0.0 2.0 1 1 1 2 2 2 0 Possible tRNA binding domain DDE_Tnp_1_5 PF13737.6 NODE_62935_length_258_cov_2.147982_g54994_i0reverse_frame_3 - 0.035 14.4 0.1 0.062 13.6 0.0 1.4 2 0 0 2 2 2 0 Transposase DDE domain Glu_cys_ligase PF04262.14 NODE_62933_length_258_cov_2.174888_g54992_i0reverse_frame_2 - 6.4e-32 110.6 0.1 6.9e-32 110.5 0.1 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase Nudc_N PF14050.6 NODE_62933_length_258_cov_2.174888_g54992_i0forward_frame_3 - 0.081 12.9 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. STALD PF18185.1 NODE_62933_length_258_cov_2.174888_g54992_i0forward_frame_2 - 0.03 13.6 0.0 0.032 13.6 0.0 1.0 1 0 0 1 1 1 0 Sir2- and TIR-associating SLOG family PH_17 PF18012.1 NODE_62932_length_258_cov_2.197309_g54991_i0forward_frame_3 - 0.11 12.2 0.3 0.19 11.5 0.3 1.3 1 0 0 1 1 1 0 PH domain Prolamin_like PF05617.11 NODE_62930_length_258_cov_2.228700_g54989_i0forward_frame_2 - 0.021 15.0 0.6 0.021 15.0 0.6 1.5 2 1 0 2 2 2 0 Prolamin-like DUF4271 PF14093.6 NODE_62928_length_258_cov_2.269058_g54987_i0reverse_frame_3 - 0.0071 16.3 5.8 0.0073 16.2 5.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4271) DUF613 PF04764.12 NODE_62926_length_258_cov_2.327354_g54985_i0reverse_frame_2 - 0.0052 16.9 0.7 0.0063 16.6 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF613) DUF4094 PF13334.6 NODE_62925_length_258_cov_2.354260_g54984_i0reverse_frame_2 - 0.025 15.0 0.0 0.033 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) DUF4125 PF13526.6 NODE_62925_length_258_cov_2.354260_g54984_i0reverse_frame_2 - 0.083 12.5 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4125) LapA_dom PF06305.11 NODE_62925_length_258_cov_2.354260_g54984_i0reverse_frame_2 - 2 8.3 5.3 0.96 9.3 0.3 2.1 1 1 1 2 2 2 0 Lipopolysaccharide assembly protein A domain Methyltrans_Mon PF14314.6 NODE_62922_length_258_cov_2.394619_g54981_i0forward_frame_3 - 0.078 11.0 0.1 0.09 10.8 0.1 1.0 1 0 0 1 1 1 0 Virus-capping methyltransferase Hydrolase_like PF13242.6 NODE_62919_length_258_cov_2.475336_g54978_i0forward_frame_3 - 2.7e-17 62.6 0.0 3.2e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 NODE_62919_length_258_cov_2.475336_g54978_i0forward_frame_3 - 1.8e-06 28.2 0.0 2.2e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 NODE_62919_length_258_cov_2.475336_g54978_i0forward_frame_3 - 0.0028 18.0 0.0 0.0034 17.7 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 NODE_62919_length_258_cov_2.475336_g54978_i0forward_frame_3 - 0.11 12.1 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase DrrA_P4M PF14860.6 NODE_62919_length_258_cov_2.475336_g54978_i0forward_frame_3 - 0.22 11.4 0.0 0.28 11.1 0.0 1.2 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain FeS PF04060.13 NODE_62917_length_258_cov_2.502242_g54976_i0forward_frame_3 - 0.077 12.7 0.1 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 Putative Fe-S cluster HECA PF15353.6 NODE_62917_length_258_cov_2.502242_g54976_i0forward_frame_2 - 0.013 15.7 0.1 0.016 15.4 0.1 1.1 1 0 0 1 1 1 0 Headcase protein family homologue Ogr_Delta PF04606.12 NODE_62916_length_258_cov_2.520179_g54975_i0reverse_frame_2 - 0.0072 16.3 1.8 0.017 15.1 1.8 1.6 1 0 0 1 1 1 1 Ogr/Delta-like zinc finger FHIPEP PF00771.20 NODE_62916_length_258_cov_2.520179_g54975_i0forward_frame_2 - 2e-14 53.0 0.0 2.1e-14 53.0 0.0 1.0 1 0 0 1 1 1 1 FHIPEP family Thioredoxin_13 PF18401.1 NODE_62916_length_258_cov_2.520179_g54975_i0forward_frame_2 - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Botulinum_HA-17 PF05588.11 NODE_62915_length_258_cov_2.565022_g54974_i0reverse_frame_3 - 0.053 13.6 0.3 0.085 13.0 0.3 1.3 1 1 0 1 1 1 0 Clostridium botulinum HA-17 domain UBX PF00789.20 NODE_62913_length_258_cov_2.582960_g54972_i0forward_frame_3 - 2.9e-13 49.8 0.0 3.7e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 UBX domain MAT1 PF06391.13 NODE_62912_length_258_cov_2.609865_g54971_i0reverse_frame_3 - 0.01 15.7 1.5 0.011 15.5 1.5 1.0 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 Myticin-prepro PF10690.9 NODE_62912_length_258_cov_2.609865_g54971_i0reverse_frame_2 - 0.85 9.9 9.0 1.1 9.6 9.0 1.3 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel BtrH_N PF14399.6 NODE_62904_length_258_cov_2.896861_g54963_i0reverse_frame_2 - 0.18 12.0 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal DNA_methylase PF00145.17 NODE_62904_length_258_cov_2.896861_g54963_i0forward_frame_2 - 5.9e-08 32.4 0.0 6.9e-08 32.2 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Mqo PF06039.15 NODE_62903_length_258_cov_2.901345_g54962_i0reverse_frame_2 - 8e-45 153.3 0.1 8.6e-45 153.2 0.1 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) Harakiri PF15196.6 NODE_62902_length_258_cov_2.937220_g54961_i0forward_frame_3 - 0.047 14.1 0.2 0.065 13.7 0.2 1.2 1 0 0 1 1 1 0 Activator of apoptosis harakiri FYVE PF01363.21 NODE_62900_length_258_cov_3.147982_g54959_i0reverse_frame_3 - 0.02 15.0 0.6 0.03 14.4 0.6 1.3 1 0 0 1 1 1 0 FYVE zinc finger LcrR PF09621.10 NODE_62900_length_258_cov_3.147982_g54959_i0reverse_frame_3 - 0.11 11.9 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Type III secretion system regulator (LcrR) V4R PF02830.18 NODE_62900_length_258_cov_3.147982_g54959_i0forward_frame_2 - 0.16 12.0 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 V4R domain Herpes_glycop_H PF02489.16 NODE_62898_length_258_cov_3.255605_g54957_i0reverse_frame_2 - 0.21 10.0 0.4 0.2 10.2 0.4 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein H main domain Thioredoxin PF00085.20 NODE_62896_length_258_cov_3.466368_g54955_i0reverse_frame_2 - 0.079 13.0 0.0 0.087 12.8 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin Wzy_C PF04932.15 NODE_62896_length_258_cov_3.466368_g54955_i0forward_frame_3 - 0.0055 16.4 1.3 0.0066 16.1 1.3 1.1 1 0 0 1 1 1 1 O-Antigen ligase DUF1307 PF06998.11 NODE_62895_length_258_cov_3.529148_g54954_i0reverse_frame_3 - 0.059 13.4 0.0 0.063 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) ANP PF00212.18 NODE_62895_length_258_cov_3.529148_g54954_i0forward_frame_2 - 0.013 15.6 1.7 0.026 14.7 0.4 2.0 2 0 0 2 2 2 0 Atrial natriuretic peptide zf-CSL PF05207.13 NODE_62892_length_258_cov_4.309417_g54951_i0reverse_frame_2 - 1.3 8.8 9.1 3.4 7.5 0.3 2.2 1 1 1 2 2 2 0 CSL zinc finger Comm PF15957.5 NODE_62892_length_258_cov_4.309417_g54951_i0forward_frame_3 - 0.079 13.3 0.1 0.094 13.1 0.1 1.1 1 0 0 1 1 1 0 Commissureless Pox_EPC_I2-L1 PF12575.8 NODE_62890_length_258_cov_4.457399_g54949_i0reverse_frame_2 - 0.019 15.2 0.9 0.029 14.6 0.9 1.3 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 Regulator_TrmB PF11495.8 NODE_62885_length_258_cov_41.677130_g54944_i0reverse_frame_2 - 0.09 11.9 0.1 0.098 11.8 0.1 1.1 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB DUF4041 PF13250.6 NODE_62880_length_258_cov_51.641256_g54939_i0forward_frame_2 - 0.27 11.1 3.2 1.2 9.0 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4041) CoxIIa PF08113.11 NODE_62878_length_258_cov_52.726457_g54937_i0forward_frame_3 - 0.13 12.1 0.5 0.21 11.4 0.5 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IIa family DASH_Ask1 PF08655.10 NODE_62870_length_258_cov_60.524664_g54929_i0forward_frame_3 - 0.016 15.1 0.1 0.032 14.1 0.1 1.6 1 1 0 1 1 1 0 DASH complex subunit Ask1 PHF12_MRG_bd PF16737.5 NODE_62870_length_258_cov_60.524664_g54929_i0forward_frame_3 - 0.19 11.5 0.2 0.33 10.7 0.2 1.3 1 0 0 1 1 1 0 PHD finger protein 12 MRG binding domain SVIP PF15811.5 NODE_62869_length_258_cov_60.681614_g54928_i0reverse_frame_3 - 0.014 15.9 1.8 0.02 15.4 1.8 1.4 1 1 0 1 1 1 0 Small VCP/p97-interacting protein zf-4CXXC_R1 PF10497.9 NODE_62867_length_258_cov_65.417040_g54926_i0forward_frame_2 - 0.016 15.4 3.3 0.022 15.0 3.3 1.3 1 1 0 1 1 1 0 Zinc-finger domain of monoamine-oxidase A repressor R1 CPBP PF02517.16 NODE_62866_length_258_cov_67.291480_g54925_i0reverse_frame_3 - 0.11 12.9 2.4 0.16 12.4 2.4 1.3 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease Diphtheria_R PF01324.19 NODE_62865_length_258_cov_67.349776_g54924_i0forward_frame_2 - 0.0063 16.2 0.0 0.0077 15.9 0.0 1.0 1 0 0 1 1 1 1 Diphtheria toxin, R domain HEAT_2 PF13646.6 NODE_62864_length_258_cov_71.977578_g54923_i0reverse_frame_2 - 1.4e-06 28.6 0.2 1.6e-06 28.4 0.2 1.1 1 0 0 1 1 1 1 HEAT repeats HEAT_PBS PF03130.16 NODE_62864_length_258_cov_71.977578_g54923_i0reverse_frame_2 - 9.1e-05 22.8 0.4 0.00021 21.7 0.1 1.8 2 0 0 2 2 2 1 PBS lyase HEAT-like repeat HEAT PF02985.22 NODE_62864_length_258_cov_71.977578_g54923_i0reverse_frame_2 - 0.096 13.0 0.0 14 6.3 0.0 2.3 2 0 0 2 2 2 0 HEAT repeat CEP170_C PF15308.6 NODE_62864_length_258_cov_71.977578_g54923_i0reverse_frame_2 - 0.096 11.2 0.0 0.12 10.9 0.0 1.1 1 0 0 1 1 1 0 CEP170 C-terminus LacY_symp PF01306.19 NODE_62858_length_258_cov_81.000000_g54917_i0reverse_frame_2 - 0.063 12.0 3.1 0.068 11.9 3.1 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter Phage_holin_3_6 PF07332.11 NODE_62858_length_258_cov_81.000000_g54917_i0reverse_frame_2 - 0.22 11.6 3.0 0.29 11.2 3.0 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III NHR2 PF08788.11 NODE_62857_length_258_cov_85.376682_g54916_i0reverse_frame_2 - 0.089 12.6 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 NHR2 domain like DUF1706 PF08020.11 NODE_62857_length_258_cov_85.376682_g54916_i0forward_frame_2 - 0.019 14.9 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1706) Folliculin PF11704.8 NODE_62855_length_258_cov_85.923767_g54914_i0reverse_frame_2 - 0.072 13.0 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport DSPc PF00782.20 NODE_62851_length_258_cov_99.304933_g54910_i0reverse_frame_3 - 1.8e-15 57.0 0.0 2.2e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain DHHC PF01529.20 NODE_62849_length_258_cov_109.013453_g54908_i0forward_frame_3 - 0.01 15.9 0.6 0.01 15.9 0.6 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase Serum_albumin PF00273.20 NODE_62848_length_258_cov_109.811659_g54907_i0reverse_frame_3 - 0.2 11.4 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 Serum albumin family DUF999 PF06198.11 NODE_62846_length_258_cov_112.385650_g54905_i0reverse_frame_3 - 0.14 12.2 0.2 0.14 12.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF999) AAR2 PF05282.11 NODE_62846_length_258_cov_112.385650_g54905_i0forward_frame_2 - 2.4 7.5 4.6 2.4 7.5 4.6 1.1 1 0 0 1 1 1 0 AAR2 protein PP2C PF00481.21 NODE_62844_length_258_cov_120.237668_g54903_i0reverse_frame_2 - 2.3e-08 34.0 0.1 2.6e-08 33.8 0.1 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 NODE_62844_length_258_cov_120.237668_g54903_i0reverse_frame_2 - 0.018 14.9 0.0 0.024 14.5 0.0 1.1 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) Coronavirus_5 PF05528.11 NODE_62840_length_258_cov_141.134529_g54899_i0reverse_frame_3 - 0.075 13.0 0.0 0.098 12.6 0.0 1.3 1 1 0 1 1 1 0 Coronavirus gene 5 protein FoP_duplication PF13865.6 NODE_62838_length_258_cov_157.838565_g54897_i0reverse_frame_3 - 6 7.5 19.7 3.9 8.1 7.8 2.1 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 RsgA_N PF16745.5 NODE_62837_length_258_cov_165.977578_g54896_i0forward_frame_3 - 0.16 11.8 0.1 0.53 10.1 0.1 1.8 1 1 0 1 1 1 0 RsgA N-terminal domain G10 PF01125.17 NODE_62835_length_258_cov_446.318386_g54894_i0reverse_frame_2 - 0.11 12.3 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 G10 protein HSP70 PF00012.20 NODE_62833_length_258_cov_11448.112108_g54892_i0reverse_frame_2 - 2.2e-35 121.9 0.0 2.4e-35 121.8 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein NAD-GH PF10712.9 NODE_62833_length_258_cov_11448.112108_g54892_i0forward_frame_3 - 7.9e-31 107.2 3.5 8.4e-31 107.1 3.5 1.0 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase FTA2 PF13095.6 ORF99848 - 0.00035 20.3 0.2 0.00035 20.3 0.2 1.2 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase PF00069.25 ORF99848 - 0.00074 19.0 0.6 0.00081 18.8 0.6 1.1 1 0 0 1 1 1 1 Protein kinase domain UPF0767 PF15990.5 ORF99020 - 0.36 11.0 3.5 0.41 10.8 3.0 1.4 1 1 0 1 1 1 0 UPF0767 family Peptidase_C3 PF00548.20 ORF99020 - 0.52 10.2 2.8 2.4 8.1 1.5 1.9 1 1 1 2 2 2 0 3C cysteine protease (picornain 3C) 5TM-5TMR_LYT PF07694.12 ORF98995 - 0.025 14.1 0.0 0.025 14.1 0.0 1.1 1 0 0 1 1 1 0 5TMR of 5TMR-LYT TMEM72 PF16054.5 ORF989 - 0.011 15.4 0.6 0.011 15.4 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein family 72 zf-NADH-PPase PF09297.11 ORF98122 - 0.033 13.9 2.0 0.033 13.9 2.0 2.0 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Response_reg PF00072.24 ORF97239 - 1.8e-14 53.9 0.2 1.9e-14 53.8 0.2 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Caf4 PF11615.8 ORF97114 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 CCR4-associated factor 4 EF-hand_9 PF14658.6 ORF96639 - 0.026 14.8 0.0 0.037 14.4 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain Phage_int_SAM_4 PF13495.6 ORF96639 - 0.12 12.9 0.0 0.16 12.5 0.0 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Resistin PF06954.11 ORF96570 - 0.026 15.1 4.1 0.031 14.8 0.7 1.9 1 1 1 2 2 2 0 Resistin Sharpin_PH PF16764.5 ORF96452 - 0.071 12.9 0.1 0.082 12.7 0.1 1.1 1 0 0 1 1 1 0 Sharpin PH domain LAP2alpha PF11560.8 ORF96284 - 0.025 14.0 0.0 0.025 14.0 0.0 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 2 alpha Nucleoside_tran PF01733.18 ORF96160 - 8.1e-16 58.3 0.1 9.1e-16 58.1 0.1 1.0 1 0 0 1 1 1 1 Nucleoside transporter DUF4020 PF13212.6 ORF95391 - 0.069 13.0 0.0 0.072 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4020) DUF4351 PF14261.6 ORF95391 - 5.2 7.2 7.1 47 4.1 6.7 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4351) eIF3m_C_helix PF18005.1 ORF95316 - 0.0047 16.6 0.4 0.0047 16.6 0.4 1.7 2 0 0 2 2 2 1 eIF3 subunit M, C-terminal helix SH3_10 PF17902.1 ORF95089 - 0.53 10.4 3.5 0.19 11.8 1.1 1.8 2 1 0 2 2 2 0 SH3 domain Ceramidase_alk PF04734.13 ORF94899 - 0.022 13.4 0.0 0.023 13.4 0.0 1.0 1 0 0 1 1 1 0 Neutral/alkaline non-lysosomal ceramidase, N-terminal DEAD PF00270.29 ORF93586 - 0.00021 21.1 0.1 0.00034 20.4 0.0 1.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase T2SSE PF00437.20 ORF93586 - 0.058 12.4 0.0 0.06 12.4 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein LapA_dom PF06305.11 ORF91104 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Keratin_2_head PF16208.5 ORF90528 - 2 8.5 8.4 2.2 8.4 8.4 1.1 1 0 0 1 1 1 0 Keratin type II head Baculo_LEF5 PF04838.12 ORF90342 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF90342 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Albumin_I PF08027.11 ORF90101 - 0.0057 16.2 3.6 0.0057 16.2 3.6 1.9 2 0 0 2 2 2 1 Albumin I chain b FN3_7 PF18447.1 ORF90063 - 0.044 14.1 3.8 0.046 14.0 3.8 1.0 1 0 0 1 1 1 0 Fibronectin type III domain Viral_NABP PF05515.11 ORF89606 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Viral nucleic acid binding Baculo_LEF5 PF04838.12 ORF88796 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF88796 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family 7tm_6 PF02949.20 ORF88453 - 0.0018 17.4 1.8 0.0024 17.0 1.8 1.1 1 0 0 1 1 1 1 7tm Odorant receptor DUF1664 PF07889.12 ORF87189 - 0.014 15.4 6.2 0.018 15.1 6.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 ORF87189 - 0.019 15.1 7.3 0.019 15.1 7.3 1.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Nicastrin PF05450.15 ORF87189 - 0.022 14.2 0.7 0.027 13.9 0.7 1.3 1 1 0 1 1 1 0 Nicastrin XkdW PF09636.10 ORF87189 - 0.031 14.4 8.0 0.042 14.0 8.0 1.3 1 0 0 1 1 1 0 XkdW protein Laminin_II PF06009.12 ORF87189 - 0.035 14.1 9.1 0.043 13.8 9.1 1.1 1 0 0 1 1 1 0 Laminin Domain II DUF4250 PF14056.6 ORF87189 - 0.04 13.9 2.3 0.044 13.7 0.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4250) HMMR_N PF15905.5 ORF87189 - 0.044 13.2 20.2 0.047 13.2 20.2 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Lectin_N PF03954.14 ORF87189 - 0.045 13.5 4.8 0.071 12.8 4.8 1.4 1 1 0 1 1 1 0 Hepatic lectin, N-terminal domain TPR_MLP1_2 PF07926.12 ORF87189 - 0.046 13.8 20.1 0.23 11.5 19.5 1.9 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Zmiz1_N PF18028.1 ORF87189 - 0.047 14.0 0.3 0.058 13.7 0.3 1.2 1 0 0 1 1 1 0 Zmiz1 N-terminal tetratricopeptide repeat domain DUF812 PF05667.11 ORF87189 - 0.05 12.5 17.9 0.054 12.4 17.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) CP12 PF02672.15 ORF87189 - 0.05 14.4 7.5 0.05 14.4 7.5 1.9 1 1 1 2 2 2 0 CP12 domain Occludin_ELL PF07303.13 ORF87189 - 0.081 13.7 13.3 0.88 10.3 13.3 1.9 1 1 0 1 1 1 0 Occludin homology domain Jnk-SapK_ap_N PF09744.9 ORF87189 - 0.085 13.1 18.4 0.092 13.0 18.4 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF1633 PF07794.11 ORF87189 - 0.11 10.6 4.3 0.1 10.7 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) DIT1_PvcA PF05141.12 ORF87189 - 0.13 11.7 7.3 0.13 11.7 7.3 1.0 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein COG6 PF06419.11 ORF87189 - 0.13 10.4 10.2 0.15 10.3 10.2 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 HAUS6_N PF14661.6 ORF87189 - 0.16 11.5 11.8 0.18 11.4 11.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Spc7 PF08317.11 ORF87189 - 0.17 10.8 18.2 0.18 10.7 18.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein Golgin_A5 PF09787.9 ORF87189 - 0.26 10.7 16.8 0.27 10.6 16.8 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 SHE3 PF17078.5 ORF87189 - 0.27 10.9 16.7 3.7 7.2 16.1 1.9 1 1 1 2 2 2 0 SWI5-dependent HO expression protein 3 TMPIT PF07851.13 ORF87189 - 0.39 9.9 13.7 0.43 9.8 13.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Fmp27_WPPW PF10359.9 ORF87189 - 0.56 9.0 14.0 0.62 8.9 14.0 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain YlqD PF11068.8 ORF87189 - 0.7 10.3 15.2 0.94 9.9 15.2 1.2 1 0 0 1 1 1 0 YlqD protein Rx_N PF18052.1 ORF87189 - 0.76 10.1 0.1 0.76 10.1 0.1 2.2 2 0 0 2 2 2 0 Rx N-terminal domain MPS2 PF17060.5 ORF87189 - 0.77 9.0 12.6 0.82 8.9 12.6 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 ZapB PF06005.12 ORF87189 - 1.4 9.5 25.2 0.19 12.2 15.2 2.1 1 1 1 2 2 2 0 Cell division protein ZapB XhlA PF10779.9 ORF87189 - 2.3 8.5 12.8 3.1 8.1 10.5 2.1 1 1 1 2 2 2 0 Haemolysin XhlA DUF4407 PF14362.6 ORF87189 - 2.3 7.5 10.2 2.5 7.4 10.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HSP70 PF00012.20 ORF87189 - 2.6 6.1 14.4 2.6 6.1 14.4 1.0 1 0 0 1 1 1 0 Hsp70 protein UPF0242 PF06785.11 ORF87189 - 3.3 7.8 18.7 4.5 7.3 18.7 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 ORF87189 - 3.8 6.0 17.5 4.3 5.8 17.5 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 ORF87189 - 4.1 6.4 14.2 5.3 6.0 14.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 V_ATPase_I PF01496.19 ORF87189 - 4.5 5.1 13.1 4.6 5.0 13.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Exonuc_VII_L PF02601.15 ORF87189 - 6.5 6.2 9.8 7.3 6.1 9.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit YabA PF06156.13 ORF87189 - 7.1 7.3 14.6 34 5.1 14.3 1.9 1 1 1 2 2 2 0 Initiation control protein YabA DUF3498 PF12004.8 ORF87189 - 8.2 5.5 15.2 9.2 5.3 15.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) DUF2408 PF10303.9 ORF87189 - 10 6.7 14.5 2.2e+02 2.4 14.5 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) TMEM173 PF15009.6 ORF86823 - 0.53 9.4 5.8 0.58 9.3 5.8 1.2 1 0 0 1 1 1 0 Transmembrane protein 173 Ank_5 PF13857.6 ORF84762 - 0.046 14.1 0.0 0.07 13.5 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) OapA_N PF08525.11 ORF84386 - 0.015 15.2 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif PAS_2 PF08446.11 ORF84096 - 0.016 15.9 0.0 0.018 15.7 0.0 1.1 1 0 0 1 1 1 0 PAS fold Fe_hyd_SSU PF02256.17 ORF83300 - 0.013 15.6 0.6 0.02 15.0 0.6 1.3 1 0 0 1 1 1 0 Iron hydrogenase small subunit ABC_membrane PF00664.23 ORF83237 - 0.026 14.2 0.6 0.031 13.9 0.6 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region Tax PF02959.16 ORF83237 - 0.071 12.5 0.3 0.081 12.4 0.3 1.2 1 0 0 1 1 1 0 HTLV Tax FANCA_interact PF15751.5 ORF83186 - 0.047 14.2 0.9 0.087 13.3 0.8 1.5 1 1 0 1 1 1 0 FAAP20 FANCA interaction domain Peptidase_M16_M PF16187.5 ORF825 - 0.12 11.6 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Middle or third domain of peptidase_M16 DUF4064 PF13273.6 ORF82277 - 0.054 13.8 2.6 0.075 13.3 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) DUF3316 PF11777.8 ORF81604 - 0.023 14.7 0.2 0.024 14.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3316) Adhesin_P1_N PF18652.1 ORF81604 - 0.15 12.1 2.0 0.21 11.7 0.2 1.9 1 1 1 2 2 2 0 Adhesin P1 N-terminal domain Fijivirus_P9-2 PF06837.11 ORF81339 - 1.7 8.0 6.8 2.8 7.3 6.8 1.5 1 1 0 1 1 1 0 Fijivirus P9-2 protein LapA_dom PF06305.11 ORF81005 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain PTP2 PF17022.5 ORF80779 - 0.098 12.3 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Polar tube protein 2 from Microsporidia Thioredoxin_16 PF18569.1 ORF80493 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain Dicty_CTDC PF00526.18 ORF79268 - 0.085 12.8 1.5 0.085 12.8 1.5 2.3 3 0 0 3 3 3 0 Dictyostelium (slime mold) repeat Sigma70_r1_1 PF03979.14 ORF79076 - 0.22 11.6 0.0 0.31 11.1 0.0 1.2 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 Cryptochrome_C PF12546.8 ORF7856 - 0.06 13.9 0.2 0.078 13.6 0.2 1.1 1 0 0 1 1 1 0 Blue/Ultraviolet sensing protein C terminal Glyco_transf_9 PF01075.17 ORF77475 - 3.5e-21 75.7 0.0 3.9e-21 75.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Baculo_LEF5 PF04838.12 ORF77405 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF77405 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Thioredoxin_16 PF18569.1 ORF77311 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain DUF2101 PF09874.9 ORF77232 - 0.034 13.9 1.1 0.037 13.7 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Campylo_MOMP PF05538.11 ORF76874 - 0.019 14.0 0.2 0.022 13.7 0.2 1.0 1 0 0 1 1 1 0 Campylobacter major outer membrane protein VATC PF18716.1 ORF76625 - 0.68 9.8 4.6 2.5 8.0 0.5 2.4 2 1 0 2 2 2 0 Vms1-associating treble clef domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks316.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks316.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks316.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks316.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:18:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Thioredoxin_16 PF18569.1 ORF76567 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_16 PF18569.1 ORF76390 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain Peptidase_M16_M PF16187.5 ORF75852 - 0.12 11.6 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Middle or third domain of peptidase_M16 DUF3217 PF11506.8 ORF75273 - 0.00012 22.0 0.5 0.00021 21.2 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3217) ABC_tran_CTD PF16326.5 ORF74769 - 0.098 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 ABC transporter C-terminal domain CN_hydrolase PF00795.22 ORF7461 - 0.00051 19.5 0.0 0.00057 19.3 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase eIF2A PF08662.11 ORF7461 - 0.15 11.9 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A DUF5363 PF17320.2 ORF74028 - 0.05 13.5 0.4 0.075 12.9 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5363) Biotin_lipoyl PF00364.22 ORF74002 - 0.075 12.9 0.3 0.093 12.6 0.3 1.2 1 0 0 1 1 1 0 Biotin-requiring enzyme Amdase PF17645.1 ORF73705 - 0.21 11.2 0.9 0.24 11.0 0.9 1.1 1 0 0 1 1 1 0 Arylmalonate decarboxylase BK_channel_a PF03493.18 ORF73540 - 0.098 12.8 0.0 0.16 12.2 0.0 1.4 1 1 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit Resistin PF06954.11 ORF73224 - 0.026 15.1 4.1 0.031 14.8 0.7 1.9 1 1 1 2 2 2 0 Resistin Pox_int_trans PF05718.12 ORF72851 - 0.034 12.8 0.3 0.042 12.6 0.3 1.1 1 0 0 1 1 1 0 Poxvirus intermediate transcription factor CSTF_C PF14304.6 ORF72851 - 0.24 11.0 2.3 4.2 7.0 0.1 2.6 3 0 0 3 3 3 0 Transcription termination and cleavage factor C-terminal Tat PF00539.18 ORF71852 - 0.13 12.5 6.2 0.19 11.9 6.2 1.3 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) DUF5090 PF17009.5 ORF71526 - 0.19 11.7 7.8 0.24 11.3 7.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) LRR19-TM PF15176.6 ORF71526 - 0.33 10.9 1.6 0.51 10.4 1.6 1.3 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Corona_M PF01635.18 ORF71526 - 0.5 9.6 5.9 0.27 10.5 0.9 2.0 1 1 1 2 2 2 0 Coronavirus M matrix/glycoprotein SelB-wing_3 PF09107.11 ORF71299 - 0.087 12.5 0.2 0.12 12.0 0.2 1.2 1 0 0 1 1 1 0 Elongation factor SelB, winged helix Hydrophob_seed PF14547.6 ORF71024 - 0.023 14.9 0.9 0.025 14.8 0.9 1.1 1 0 0 1 1 1 0 Hydrophobic seed protein Baculo_LEF5 PF04838.12 ORF69817 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF69817 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Mem_trans PF03547.18 ORF69549 - 2.4 6.4 7.7 2.8 6.2 7.7 1.0 1 0 0 1 1 1 0 Membrane transport protein US22 PF02393.16 ORF68669 - 0.87 9.9 5.3 2.4 8.5 0.3 2.1 1 1 1 2 2 2 0 US22 like AAA_25 PF13481.6 ORF68538 - 0.14 11.7 0.0 0.3 10.7 0.0 1.5 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 ORF68538 - 0.27 10.5 0.0 0.33 10.3 0.0 1.1 1 0 0 1 1 1 0 KaiC LapA_dom PF06305.11 ORF68475 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain BST2 PF16716.5 ORF68175 - 0.019 15.5 0.7 0.024 15.2 0.7 1.1 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 SUI1 PF01253.22 ORF67720 - 8e-15 55.1 0.0 1.1e-14 54.7 0.0 1.2 1 0 0 1 1 1 1 Translation initiation factor SUI1 ZYG-11_interact PF05884.12 ORF67714 - 0.17 11.3 0.4 0.19 11.1 0.4 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 Tir_receptor_N PF07490.11 ORF67398 - 0.46 10.3 3.4 0.43 10.4 0.3 2.0 1 1 1 2 2 2 0 Translocated intimin receptor (Tir) N-terminus YliH PF10799.8 ORF67267 - 0.22 11.4 1.8 0.3 11.0 1.8 1.5 1 1 0 1 1 1 0 Biofilm formation protein (YliH/bssR) TMEM240 PF15207.6 ORF67114 - 0.083 12.6 0.6 0.094 12.4 0.6 1.2 1 0 0 1 1 1 0 TMEM240 family EI24 PF07264.11 ORF67052 - 1.2 9.4 8.5 1.4 9.2 8.5 1.0 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) HCMV_UL139 PF12507.8 ORF66499 - 0.11 12.9 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Human Cytomegalovirus UL139 protein UPF0688 PF15772.5 ORF66472 - 0.022 15.1 0.5 0.024 14.9 0.5 1.1 1 0 0 1 1 1 0 UPF0688 family Baculo_LEF5 PF04838.12 ORF66332 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF66332 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family BssB_TutG PF18512.1 ORF66257 - 0.39 10.6 3.4 0.37 10.7 0.3 2.0 1 1 1 2 2 2 0 Benzylsuccinate synthase beta subunit Toxin_24 PF08094.11 ORF65377 - 0.0097 15.7 3.9 0.0097 15.7 3.9 3.3 3 0 0 3 3 3 1 Conotoxin TVIIA/GS family LapA_dom PF06305.11 ORF64760 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Molybdop_Fe4S4 PF04879.16 ORF63743 - 0.2 11.7 4.6 0.29 11.1 4.6 1.3 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain Mem_trans PF03547.18 ORF63421 - 0.024 13.1 1.2 0.029 12.8 1.2 1.1 1 0 0 1 1 1 0 Membrane transport protein DUF2256 PF10013.9 ORF63421 - 0.077 13.1 0.7 0.11 12.7 0.7 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF1586 PF07625.11 ORF63118 - 1.4 9.0 4.0 20 5.4 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1586) PMD PF10536.9 ORF62816 - 0.17 11.0 1.8 0.17 11.0 1.8 1.0 1 0 0 1 1 1 0 Plant mobile domain MtrG PF04210.13 ORF62816 - 5.6 6.9 6.2 5.2 7.0 0.7 2.5 2 1 1 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G DUF3452 PF11934.8 ORF62636 - 0.016 14.8 0.1 0.017 14.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) Hydrophob_seed PF14547.6 ORF61662 - 0.023 14.9 0.9 0.025 14.8 0.9 1.1 1 0 0 1 1 1 0 Hydrophobic seed protein Orthopox_F7 PF05813.12 ORF61517 - 0.3 11.2 0.7 0.37 10.9 0.0 1.5 2 0 0 2 2 2 0 Orthopoxvirus F7 protein VATC PF18716.1 ORF60661 - 0.68 9.8 4.6 2.5 8.0 0.5 2.4 2 1 0 2 2 2 0 Vms1-associating treble clef domain STAG PF08514.11 ORF6054 - 0.0018 18.2 2.5 0.0024 17.7 2.5 1.3 1 0 0 1 1 1 1 STAG domain Herpes_UL69 PF05459.12 ORF58682 - 0.0081 15.5 0.3 0.01 15.2 0.3 1.2 1 0 0 1 1 1 1 Herpesvirus transcriptional regulator family Cytochrome-c551 PF10643.9 ORF58678 - 0.58 9.7 6.3 0.76 9.3 6.3 1.3 1 1 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 OapA_N PF08525.11 ORF58378 - 0.015 15.2 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif PilZ PF07238.14 ORF57724 - 0.044 14.1 0.0 0.074 13.4 0.0 1.4 1 1 0 1 1 1 0 PilZ domain 5TM-5TMR_LYT PF07694.12 ORF57391 - 0.025 14.1 0.0 0.025 14.1 0.0 1.1 1 0 0 1 1 1 0 5TMR of 5TMR-LYT HTH_36 PF13730.6 ORF57383 - 0.0082 16.1 0.1 0.02 14.9 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Cytochrome-c551 PF10643.9 ORF56397 - 0.58 9.7 6.3 0.76 9.3 6.3 1.3 1 1 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 Flexi_CP PF00286.20 ORF56392 - 0.038 13.9 0.2 0.043 13.7 0.2 1.2 1 0 0 1 1 1 0 Viral coat protein DUF2101 PF09874.9 ORF56146 - 0.034 13.9 1.1 0.037 13.7 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Sial-lect-inser PF09264.10 ORF56021 - 0.16 11.7 0.0 0.19 11.5 0.0 1.0 1 0 0 1 1 1 0 Vibrio cholerae sialidase, lectin insertion DUF4139 PF13598.6 ORF55988 - 0.58 9.8 7.1 0.64 9.7 7.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) KLRAQ PF10205.9 ORF54447 - 0.00066 19.9 8.9 0.0071 16.6 8.9 2.0 1 1 0 1 1 1 1 Predicted coiled-coil domain-containing protein TSC22 PF01166.18 ORF54447 - 0.039 14.3 4.9 0.47 10.8 0.4 2.4 2 0 0 2 2 2 0 TSC-22/dip/bun family YabA PF06156.13 ORF54447 - 0.12 13.0 8.0 0.049 14.3 4.6 1.8 1 1 1 2 2 2 0 Initiation control protein YabA RNase_E_G PF10150.9 ORF54447 - 0.13 11.7 4.6 0.12 11.7 4.6 1.1 1 0 0 1 1 1 0 Ribonuclease E/G family UPF0449 PF15136.6 ORF54447 - 0.16 12.5 6.6 0.19 12.2 6.6 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 bZIP_1 PF00170.21 ORF54447 - 3 8.0 11.7 0.8 9.8 2.1 2.3 1 1 0 2 2 2 0 bZIP transcription factor COX7a PF02238.15 ORF54299 - 0.17 12.3 0.1 0.24 11.8 0.1 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VII DUF3760 PF12586.8 ORF54097 - 0.075 13.2 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3760) dNK PF01712.19 ORF54097 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Deoxynucleoside kinase GTP_cyclohydro2 PF00925.20 ORF5407 - 0.047 13.3 0.1 0.051 13.2 0.1 1.0 1 0 0 1 1 1 0 GTP cyclohydrolase II Peptidase_S49 PF01343.18 ORF5296 - 3.3e-10 40.1 0.0 4.7e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S49 GCS PF03074.16 ORF52146 - 8.4e-13 48.4 0.0 1e-12 48.2 0.0 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase DUF2477 PF10631.9 ORF52013 - 5 7.8 14.8 6.2 7.5 14.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2477) NPR1_interact PF15699.5 ORF51916 - 0.038 14.6 2.0 0.048 14.3 2.0 1.1 1 0 0 1 1 1 0 NPR1 interacting DUF3671 PF12420.8 ORF51916 - 3.5 7.7 10.2 2.1 8.5 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function CDV3 PF15359.6 ORF51632 - 0.1 13.1 1.8 0.12 12.9 1.8 1.3 1 0 0 1 1 1 0 Carnitine deficiency-associated protein 3 Cas6_N PF17952.1 ORF51426 - 0.022 15.0 2.3 0.025 14.9 2.3 1.0 1 0 0 1 1 1 0 Cas6 N-terminal domain Cytochrome_C7 PF14522.6 ORF51410 - 0.24 11.4 8.7 0.41 10.7 8.7 1.4 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c Rhodanese_C PF12368.8 ORF51410 - 1 9.8 10.2 4.7 7.7 6.8 2.1 1 1 1 2 2 2 0 Rhodanase C-terminal Ycf1 PF05758.12 ORF50724 - 2.4 5.9 7.0 2.6 5.8 7.0 1.0 1 0 0 1 1 1 0 Ycf1 BRF1 PF07741.13 ORF50683 - 0.066 13.6 4.1 0.89 9.9 0.2 2.1 1 1 1 2 2 2 0 Brf1-like TBP-binding domain YliH PF10799.8 ORF50608 - 0.23 11.4 1.8 0.4 10.6 1.8 1.4 1 1 0 1 1 1 0 Biofilm formation protein (YliH/bssR) NUP50 PF08911.11 ORF50302 - 0.062 14.0 0.3 0.089 13.5 0.3 1.3 1 0 0 1 1 1 0 NUP50 (Nucleoporin 50 kDa) AAA_25 PF13481.6 ORF49761 - 0.14 11.7 0.0 0.3 10.7 0.0 1.5 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 ORF49761 - 0.27 10.5 0.0 0.33 10.3 0.0 1.1 1 0 0 1 1 1 0 KaiC ZYG-11_interact PF05884.12 ORF48098 - 0.064 12.7 0.0 0.072 12.5 0.0 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 Spidroin_MaSp PF11260.8 ORF47082 - 0.092 13.1 2.2 0.12 12.7 2.2 1.1 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 CinA_KH PF18146.1 ORF47039 - 0.011 15.9 0.0 0.014 15.5 0.0 1.1 1 0 0 1 1 1 0 Damage-inducible protein CinA KH domain DUF406 PF04175.12 ORF47039 - 0.012 16.1 0.1 0.015 15.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF406) HSCB_C PF07743.13 ORF47039 - 0.034 14.6 0.3 0.048 14.1 0.3 1.2 1 0 0 1 1 1 0 HSCB C-terminal oligomerisation domain Cas6_N PF17952.1 ORF46178 - 0.022 15.0 2.3 0.025 14.9 2.3 1.0 1 0 0 1 1 1 0 Cas6 N-terminal domain DZR PF12773.7 ORF46096 - 0.045 13.8 1.5 0.086 12.9 0.8 1.6 1 1 1 2 2 2 0 Double zinc ribbon zf-P11 PF03854.14 ORF46096 - 0.29 10.8 5.7 0.074 12.7 1.8 1.9 2 0 0 2 2 2 0 P-11 zinc finger DUF872 PF05915.12 ORF45354 - 7.9e-07 29.2 1.7 9.8e-07 28.9 1.7 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) Ost5 PF05251.12 ORF45354 - 0.0052 17.0 0.7 0.013 15.8 0.6 1.7 1 1 1 2 2 2 1 Oligosaccharyltransferase subunit 5 DUF3995 PF13160.6 ORF45354 - 0.022 15.1 0.1 0.026 14.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) TssN PF17555.2 ORF45354 - 0.049 13.0 0.6 0.051 13.0 0.6 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN Claudin_2 PF13903.6 ORF45354 - 0.066 13.0 0.4 0.071 12.8 0.4 1.0 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction 2TM PF13239.6 ORF45354 - 0.073 13.4 0.9 0.086 13.2 0.9 1.1 1 0 0 1 1 1 0 2TM domain DUF3040 PF11239.8 ORF45354 - 0.25 11.6 6.0 0.71 10.2 6.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3040) DUF3043 PF11241.8 ORF45354 - 0.42 10.6 1.3 0.47 10.5 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) COPI_assoc PF08507.10 ORF45354 - 0.73 9.9 5.4 5.7 7.0 5.4 1.9 1 1 0 1 1 1 0 COPI associated protein SdpI PF13630.6 ORF45354 - 1.9 8.7 5.3 2.6 8.2 5.3 1.3 1 0 0 1 1 1 0 SdpI/YhfL protein family Tmemb_161AB PF10268.9 ORF45276 - 0.035 12.8 0.1 0.035 12.8 0.1 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB Methyltransf_18 PF12847.7 ORF45196 - 0.081 12.8 0.0 0.081 12.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain SBF_like PF13593.6 ORF4494 - 0.023 14.0 0.2 0.026 13.9 0.2 1.1 1 0 0 1 1 1 0 SBF-like CPA transporter family (DUF4137) Sars6 PF12133.8 ORF4407 - 0.38 10.7 0.1 0.38 10.7 0.1 2.6 2 1 1 3 3 3 0 Open reading frame 6 from SARS coronavirus DUF5534 PF17686.1 ORF42985 - 0.048 13.9 0.1 0.058 13.7 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5534) DUF3624 PF12292.8 ORF42254 - 0.02 15.3 1.8 0.027 14.9 1.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3624) SH3_2 PF07653.17 ORF41552 - 0.11 12.1 0.6 0.14 11.9 0.3 1.6 1 1 0 1 1 1 0 Variant SH3 domain SLC3A2_N PF16028.5 ORF41544 - 0.17 11.4 0.9 0.22 11.1 0.9 1.2 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus RNA_pol_Rpb1_R PF05001.13 ORF40877 - 0.045 14.1 3.5 2.6 8.6 0.0 2.6 2 0 0 2 2 2 0 RNA polymerase Rpb1 C-terminal repeat DUF3760 PF12586.8 ORF39932 - 0.075 13.2 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3760) dNK PF01712.19 ORF39932 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Deoxynucleoside kinase GRAS PF03514.14 ORF3977 - 0.13 11.1 0.0 0.13 11.1 0.0 1.0 1 0 0 1 1 1 0 GRAS domain family Borrelia_rep PF03183.13 ORF39512 - 8.9 6.5 14.6 0.43 10.6 2.7 3.5 3 0 0 3 3 3 0 Borrelia repeat protein Pox_A32 PF04665.12 ORF38458 - 0.0024 17.4 0.0 0.0025 17.3 0.0 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein AAA_29 PF13555.6 ORF38458 - 0.0057 16.4 0.0 0.008 15.9 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 ORF38458 - 0.049 13.5 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 NACHT domain T2SSE PF00437.20 ORF38458 - 0.072 12.1 0.0 0.075 12.1 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein zf-A20 PF01754.16 ORF3836 - 2e-06 27.6 2.9 2e-06 27.6 2.9 2.1 2 0 0 2 2 2 1 A20-like zinc finger tRNA-synt_1g PF09334.11 ORF3836 - 0.017 13.9 1.2 0.018 13.8 1.2 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (M) zf_C2H2_10 PF18414.1 ORF3836 - 3.4 7.3 5.6 9.4 5.9 0.5 2.3 2 0 0 2 2 2 0 C2H2 type zinc-finger AGH PF17558.2 ORF38075 - 0.0069 16.5 0.3 0.01 16.0 0.3 1.3 1 0 0 1 1 1 1 Androgenic gland hormone Nucleoporin_FG2 PF15967.5 ORF3720 - 0.0016 17.1 0.4 0.0019 16.8 0.4 1.0 1 0 0 1 1 1 1 Nucleoporin FG repeated region Holin_BhlA PF10960.8 ORF3713 - 0.2 11.6 0.0 0.29 11.1 0.0 1.2 1 0 0 1 1 1 0 BhlA holin family MSSP PF03940.13 ORF36973 - 0.29 10.8 18.0 0.56 9.9 18.0 1.5 1 0 0 1 1 1 0 Male specific sperm protein Baculo_LEF5 PF04838.12 ORF36724 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF36724 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family DUF3330 PF11809.8 ORF36617 - 0.031 14.3 0.3 0.048 13.7 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3330) DUF5478 PF17572.2 ORF36292 - 0.068 13.3 0.1 0.088 12.9 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5478) LapA_dom PF06305.11 ORF35513 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain NPR1_interact PF15699.5 ORF34872 - 0.038 14.6 2.0 0.048 14.3 2.0 1.1 1 0 0 1 1 1 0 NPR1 interacting DUF3671 PF12420.8 ORF34872 - 3.5 7.7 10.2 2.1 8.5 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF5090 PF17009.5 ORF34407 - 0.19 11.7 7.8 0.24 11.3 7.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) LRR19-TM PF15176.6 ORF34407 - 0.33 10.9 1.6 0.51 10.4 1.6 1.3 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Corona_M PF01635.18 ORF34407 - 0.5 9.6 5.9 0.27 10.5 0.9 2.0 1 1 1 2 2 2 0 Coronavirus M matrix/glycoprotein Dicty_CTDC PF00526.18 ORF34248 - 0.085 12.8 1.5 0.085 12.8 1.5 2.3 3 0 0 3 3 3 0 Dictyostelium (slime mold) repeat DUF2157 PF09925.9 ORF34206 - 0.12 12.1 4.6 0.1 12.4 3.9 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) Herpes_LMP1 PF05297.11 ORF34206 - 5.7 6.0 6.7 5.6 6.0 6.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) FANC_SAP PF18081.1 ORF33642 - 0.13 12.5 0.6 0.13 12.5 0.6 1.7 2 0 0 2 2 2 0 Fanconi anemia-associated nuclease SAP domain RMMBL PF07521.12 ORF33417 - 0.19 11.7 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain vMSA PF00695.19 ORF33317 - 0.057 12.5 1.2 0.065 12.3 1.2 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus SARS_X4 PF08779.10 ORF33217 - 0.047 13.9 0.1 0.054 13.7 0.1 1.1 1 0 0 1 1 1 0 SARS coronavirus X4 like DUF3297 PF11730.8 ORF31802 - 0.01 15.7 1.6 0.013 15.3 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3297) mRNA_cap_enzyme PF01331.19 ORF31802 - 0.42 10.4 10.9 0.43 10.4 10.9 1.0 1 0 0 1 1 1 0 mRNA capping enzyme, catalytic domain DUF4333 PF14230.6 ORF3160 - 0.047 13.9 0.0 0.058 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4333) Transpos_assoc PF13963.6 ORF3160 - 0.065 13.6 1.1 10 6.5 0.1 2.1 2 0 0 2 2 2 0 Transposase-associated domain Tir_receptor_N PF07490.11 ORF31469 - 0.46 10.3 3.4 0.43 10.4 0.3 2.0 1 1 1 2 2 2 0 Translocated intimin receptor (Tir) N-terminus Ribosomal_L27 PF01016.19 ORF29668 - 6.8e-39 131.8 3.4 7.5e-39 131.6 3.4 1.0 1 0 0 1 1 1 1 Ribosomal L27 protein DUF2284 PF10050.9 ORF29622 - 0.0047 16.7 0.1 0.0051 16.6 0.1 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) Peptidase_C31 PF05410.13 ORF29355 - 0.067 13.3 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 Porcine arterivirus-type cysteine proteinase alpha DUF4171 PF13775.6 ORF28738 - 0.01 16.3 2.9 0.01 16.3 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4171) PXB PF12828.7 ORF2848 - 0.095 12.7 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 PX-associated Zn_Tnp_IS1595 PF12760.7 ORF28097 - 0.033 14.2 2.6 0.067 13.2 2.6 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DUF2544 PF11245.8 ORF28037 - 0.059 12.8 0.0 0.067 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2544) Peptidase_M16_M PF16187.5 ORF27782 - 0.12 11.6 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Middle or third domain of peptidase_M16 Cas6_N PF17952.1 ORF27432 - 0.022 15.0 2.3 0.025 14.9 2.3 1.0 1 0 0 1 1 1 0 Cas6 N-terminal domain ADH_N PF08240.12 ORF26555 - 0.003 17.4 0.0 0.0047 16.8 0.0 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 ORF26555 - 0.0084 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 N-terminal domain of oxidoreductase Nab6_mRNP_bdg PF10567.9 ORF2627 - 0.052 13.0 1.3 0.053 13.0 1.3 1.0 1 0 0 1 1 1 0 RNA-recognition motif Dam PF05869.11 ORF25153 - 0.09 12.3 0.4 0.099 12.2 0.4 1.1 1 0 0 1 1 1 0 DNA N-6-adenine-methyltransferase (Dam) I-EGF_1 PF18372.1 ORF25047 - 0.25 11.4 0.2 0.25 11.4 0.2 3.1 3 1 0 3 3 3 0 Integrin beta epidermal growth factor like domain 1 ESR1_C PF12743.7 ORF24665 - 4.8 7.0 7.1 1.7 8.5 2.2 2.3 3 0 0 3 3 3 0 Oestrogen-type nuclear receptor final C-terminal SKA2 PF16740.5 ORF23648 - 0.00062 19.5 3.5 0.00083 19.1 3.5 1.2 1 0 0 1 1 1 1 Spindle and kinetochore-associated protein 2 DUF5082 PF16888.5 ORF23648 - 0.0022 18.2 1.9 0.0027 18.0 1.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) BRE1 PF08647.11 ORF23648 - 0.0039 17.2 5.3 0.0046 17.0 5.3 1.3 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase RasGAP_C PF03836.15 ORF23648 - 0.0044 17.2 4.3 0.0055 16.9 4.3 1.1 1 0 0 1 1 1 1 RasGAP C-terminus Baculo_PEP_C PF04513.12 ORF23648 - 0.0056 16.7 1.6 0.0065 16.5 1.6 1.1 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus APG6_N PF17675.1 ORF23648 - 0.0077 16.8 2.7 0.0085 16.6 2.7 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region WXG100 PF06013.12 ORF23648 - 0.0097 16.1 2.1 0.049 13.9 0.5 2.2 2 1 0 2 2 2 1 Proteins of 100 residues with WXG DUF4763 PF15960.5 ORF23648 - 0.012 15.0 2.2 0.014 14.7 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Vps51 PF08700.11 ORF23648 - 0.018 15.1 2.9 0.075 13.1 2.9 1.9 1 1 0 1 1 1 0 Vps51/Vps67 DivIC PF04977.15 ORF23648 - 0.019 14.7 5.9 0.022 14.5 4.9 1.7 1 1 0 2 2 2 0 Septum formation initiator HALZ PF02183.18 ORF23648 - 0.023 14.9 2.3 0.046 13.9 2.3 1.5 1 0 0 1 1 1 0 Homeobox associated leucine zipper Tup_N PF08581.10 ORF23648 - 0.024 14.9 5.9 0.27 11.6 4.0 2.1 1 1 1 2 2 2 0 Tup N-terminal FmiP_Thoc5 PF09766.9 ORF23648 - 0.027 13.8 4.9 0.039 13.3 4.9 1.1 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 NPV_P10 PF05531.12 ORF23648 - 0.033 14.7 3.2 0.044 14.2 1.8 1.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Alpha_Helical PF18489.1 ORF23648 - 0.036 14.3 1.5 0.039 14.1 1.5 1.1 1 0 0 1 1 1 0 Alpha helical domain DUF3450 PF11932.8 ORF23648 - 0.042 13.2 2.5 0.043 13.1 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) bZIP_1 PF00170.21 ORF23648 - 0.055 13.6 8.5 0.082 13.0 8.5 1.2 1 0 0 1 1 1 0 bZIP transcription factor Prefoldin PF02996.17 ORF23648 - 0.064 13.2 4.8 0.071 13.0 3.8 1.6 2 0 0 2 2 2 0 Prefoldin subunit ZapB PF06005.12 ORF23648 - 0.067 13.6 6.2 0.11 12.9 6.2 1.4 1 0 0 1 1 1 0 Cell division protein ZapB Prominin PF05478.11 ORF23648 - 0.071 11.1 3.5 0.071 11.1 3.5 1.0 1 0 0 1 1 1 0 Prominin Spc24 PF08286.11 ORF23648 - 0.11 12.8 5.3 0.13 12.5 4.9 1.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 SlyX PF04102.12 ORF23648 - 0.12 13.0 2.6 0.14 12.8 1.9 1.6 1 1 0 1 1 1 0 SlyX PhageMin_Tail PF10145.9 ORF23648 - 0.16 11.8 3.2 0.39 10.6 3.2 1.6 1 1 0 1 1 1 0 Phage-related minor tail protein GrpE PF01025.19 ORF23648 - 0.23 11.1 7.2 0.21 11.2 5.9 1.5 1 1 0 2 2 2 0 GrpE TMF_DNA_bd PF12329.8 ORF23648 - 0.28 11.2 8.8 0.6 10.2 8.8 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding LapA_dom PF06305.11 ORF23066 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain RCC1 PF00415.18 ORF22962 - 0.061 14.0 0.1 0.094 13.4 0.1 1.5 1 1 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat PEGSRP PF07623.11 ORF22734 - 0.35 10.7 5.2 6.7 6.6 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DUF3273 PF11677.8 ORF21715 - 0.033 13.5 0.8 0.037 13.4 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3273) T4SS_CagC PF16943.5 ORF21715 - 0.084 13.0 0.2 0.097 12.9 0.2 1.1 1 0 0 1 1 1 0 Cag pathogenicity island, type IV secretory system HAP2-GCS1 PF10699.9 ORF21137 - 0.049 13.6 0.3 1.5 8.8 0.0 2.2 2 0 0 2 2 2 0 Male gamete fusion factor UCR_TM PF02921.14 ORF2079 - 0.14 12.6 0.1 0.22 12.0 0.1 1.3 1 0 0 1 1 1 0 Ubiquinol cytochrome reductase transmembrane region IncE PF17627.2 ORF20568 - 0.068 13.2 0.2 0.081 12.9 0.2 1.1 1 0 0 1 1 1 0 Inclusion membrane protein E 5TM-5TMR_LYT PF07694.12 ORF19856 - 0.025 14.1 0.0 0.025 14.1 0.0 1.1 1 0 0 1 1 1 0 5TMR of 5TMR-LYT HTH_7 PF02796.15 ORF18913 - 7.7e-12 45.1 0.0 1.1e-11 44.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Resolvase PF00239.21 ORF18913 - 6.8e-06 26.2 1.2 1.3e-05 25.3 0.2 1.8 2 0 0 2 2 2 1 Resolvase, N terminal domain HTH_38 PF13936.6 ORF18913 - 1.6e-05 24.5 0.2 3.1e-05 23.6 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_28 PF13518.6 ORF18913 - 4.6e-05 23.5 0.1 9e-05 22.5 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF18913 - 0.00063 19.5 0.1 0.0011 18.7 0.1 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 ORF18913 - 0.0028 17.7 0.2 0.06 13.4 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix Sigma70_r4 PF04545.16 ORF18913 - 0.0086 15.6 0.1 0.016 14.7 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Tnp_ISL3 PF13542.6 ORF18913 - 0.019 14.4 0.1 0.037 13.5 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_11 PF08279.12 ORF18913 - 0.019 14.9 0.2 0.028 14.4 0.2 1.3 1 0 0 1 1 1 0 HTH domain Sigma70_r4_2 PF08281.12 ORF18913 - 0.055 13.2 0.2 0.11 12.2 0.2 1.6 1 1 0 1 1 1 0 Sigma-70, region 4 LysM PF01476.20 ORF18913 - 0.083 13.0 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 LysM domain Bot1p PF12298.8 ORF18913 - 0.09 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic mitochondrial regulator protein UPF0122 PF04297.14 ORF18913 - 0.095 12.9 0.0 0.16 12.2 0.0 1.4 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_36 PF13730.6 ORF18913 - 0.14 12.1 0.1 0.21 11.6 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain AviRa PF11599.8 ORF18463 - 0.095 12.1 0.0 5 6.5 0.0 2.0 1 1 1 2 2 2 0 RRNA methyltransferase AviRa DCAF15_WD40 PF14939.6 ORF18463 - 0.19 11.4 0.8 9.5 5.8 0.1 2.0 2 0 0 2 2 2 0 DDB1-and CUL4-substrate receptor 15, WD repeat ENOD93 PF03386.14 ORF18463 - 0.19 11.6 0.9 7.3 6.5 0.1 2.1 2 0 0 2 2 2 0 Early nodulin 93 ENOD93 protein TMEM72 PF16054.5 ORF1813 - 0.011 15.4 0.6 0.011 15.4 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein family 72 Thioredoxin_16 PF18569.1 ORF18103 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain Amdase PF17645.1 ORF17571 - 0.21 11.2 0.9 0.24 11.0 0.9 1.1 1 0 0 1 1 1 0 Arylmalonate decarboxylase Peptidase_A22B PF04258.13 ORF16187 - 4e-06 26.6 0.0 4.7e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Signal peptide peptidase DUF2048 PF09752.9 ORF16187 - 0.011 14.9 0.0 0.011 14.9 0.0 1.0 1 0 0 1 1 1 0 Abhydrolase domain containing 18 Campylo_MOMP PF05538.11 ORF16147 - 0.019 14.0 0.2 0.022 13.7 0.2 1.0 1 0 0 1 1 1 0 Campylobacter major outer membrane protein DUF2101 PF09874.9 ORF152864 - 0.034 13.9 1.1 0.037 13.7 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) RPS31 PF17067.5 ORF152217 - 0.37 11.0 3.4 0.49 10.6 3.4 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e ketoacyl-synt PF00109.26 ORF151068 - 0.085 12.4 1.0 0.092 12.3 1.0 1.4 1 1 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain LapA_dom PF06305.11 ORF151045 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Phage_lysozyme2 PF18013.1 ORF150747 - 0.02 14.9 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Phage tail lysozyme Thioredoxin_16 PF18569.1 ORF150361 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain SYS1 PF09801.9 ORF150308 - 8.4e-21 74.6 0.5 9.2e-21 74.5 0.5 1.0 1 0 0 1 1 1 1 Integral membrane protein S linking to the trans Golgi network Coq4 PF05019.13 ORF150308 - 0.081 12.2 0.1 0.092 12.1 0.1 1.1 1 0 0 1 1 1 0 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 HemY_N PF07219.13 ORF150141 - 0.069 13.4 1.4 0.099 12.9 1.4 1.2 1 0 0 1 1 1 0 HemY protein N-terminus zf-C3HC4_4 PF15227.6 ORF150038 - 0.0043 17.2 0.2 0.0065 16.6 0.2 1.2 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Campylo_MOMP PF05538.11 ORF14986 - 0.019 14.0 0.2 0.022 13.7 0.2 1.0 1 0 0 1 1 1 0 Campylobacter major outer membrane protein Crp PF00325.20 ORF14809 - 0.056 13.1 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family Ras PF00071.22 ORF147921 - 3e-15 56.2 0.1 3.5e-15 56.0 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF147921 - 1.6e-11 44.5 0.0 1.8e-11 44.3 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF147921 - 0.0029 17.7 0.0 0.0033 17.5 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase TniB PF05621.11 ORF147921 - 0.0041 16.6 0.0 0.0046 16.4 0.0 1.1 1 0 0 1 1 1 1 Bacterial TniB protein Arf PF00025.21 ORF147921 - 0.032 13.7 0.0 0.035 13.5 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family Tmemb_161AB PF10268.9 ORF147336 - 0.035 12.8 0.1 0.035 12.8 0.1 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB CENP-W PF15510.6 ORF147163 - 0.044 14.0 2.7 0.053 13.8 2.7 1.3 1 0 0 1 1 1 0 CENP-W protein Thioredoxin_16 PF18569.1 ORF147152 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain DUF1077 PF06417.12 ORF146997 - 0.26 11.3 1.8 0.27 11.2 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) DUF3404 PF11884.8 ORF14670 - 0.22 10.7 0.5 0.24 10.6 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) SSFA2_C PF14723.6 ORF1465 - 0.35 10.8 1.9 0.41 10.5 1.9 1.1 1 0 0 1 1 1 0 Sperm-specific antigen 2 C-terminus Baculo_LEF5 PF04838.12 ORF146340 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF146340 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Herpes_UL69 PF05459.12 ORF145631 - 0.0081 15.5 0.3 0.01 15.2 0.3 1.2 1 0 0 1 1 1 1 Herpesvirus transcriptional regulator family Holin_2-3 PF13272.6 ORF145613 - 0.11 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Putative 2/3 transmembrane domain holin tRNA-synt_1c_C PF03950.18 ORF144883 - 0.046 13.6 1.3 0.049 13.5 1.3 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), anti-codon binding domain Phage_holin_3_7 PF05449.11 ORF144791 - 0.037 14.0 1.1 0.051 13.6 1.1 1.1 1 0 0 1 1 1 0 Putative 3TM holin, Phage_holin_3 Transp_cyt_pur PF02133.15 ORF144363 - 0.14 10.9 0.1 0.15 10.8 0.1 1.0 1 0 0 1 1 1 0 Permease for cytosine/purines, uracil, thiamine, allantoin Opy2 PF09463.10 ORF144363 - 0.25 11.7 1.4 20 5.6 0.2 2.2 2 0 0 2 2 2 0 Opy2 protein Metallothio_5 PF02067.15 ORF143785 - 0.19 11.9 12.3 0.34 11.1 12.3 1.4 1 1 0 1 1 1 0 Metallothionein family 5 DUF3446 PF11928.8 ORF143643 - 0.057 13.7 0.9 0.071 13.4 0.9 1.2 1 0 0 1 1 1 0 Early growth response N-terminal domain NP1-WLL PF11733.8 ORF143643 - 0.19 11.5 1.2 0.2 11.4 1.2 1.2 1 0 0 1 1 1 0 Non-capsid protein NP1 FN3_7 PF18447.1 ORF143235 - 0.044 14.1 3.8 0.046 14.0 3.8 1.0 1 0 0 1 1 1 0 Fibronectin type III domain DUF3760 PF12586.8 ORF142864 - 0.075 13.2 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3760) dNK PF01712.19 ORF142864 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Deoxynucleoside kinase zf-RING_2 PF13639.6 ORF142774 - 2e-07 31.2 7.2 2.8e-07 30.8 7.2 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF142774 - 0.00013 21.6 2.4 0.00086 19.0 0.5 2.3 2 0 0 2 2 2 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF142774 - 0.00075 19.1 4.9 0.001 18.7 4.9 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 ORF142774 - 0.001 18.9 8.1 0.0015 18.4 8.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 ORF142774 - 0.014 15.2 1.3 0.021 14.6 1.3 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-rbx1 PF12678.7 ORF142774 - 0.02 15.2 5.7 0.034 14.4 5.7 1.4 1 0 0 1 1 1 0 RING-H2 zinc finger domain Baculo_IE-1 PF05290.11 ORF142774 - 0.036 14.0 0.6 0.049 13.6 0.6 1.2 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) zf-RING_UBOX PF13445.6 ORF142774 - 0.046 13.8 2.1 0.046 13.8 2.1 2.2 2 0 0 2 2 2 0 RING-type zinc-finger Rad50_zn_hook PF04423.14 ORF142774 - 0.05 13.4 0.1 0.93 9.4 0.0 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-C3HC4 PF00097.25 ORF142774 - 0.058 13.3 7.1 0.13 12.1 7.0 1.7 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF2116 PF09889.9 ORF142774 - 0.076 13.0 7.0 0.52 10.3 1.5 2.2 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) zf-C3HC4_3 PF13920.6 ORF142774 - 0.076 12.9 8.6 0.92 9.4 8.7 2.1 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Rtf2 PF04641.12 ORF142774 - 0.11 11.8 0.6 0.14 11.5 0.6 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger zf-RING_6 PF14835.6 ORF142774 - 0.33 10.8 5.7 0.63 9.9 5.9 1.4 1 1 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_5 PF14634.6 ORF142774 - 0.44 10.5 9.1 1.8 8.6 8.8 1.9 1 1 1 2 2 2 0 zinc-RING finger domain Zn-ribbon_8 PF09723.10 ORF142774 - 0.53 10.5 6.2 0.81 9.9 1.8 2.3 1 1 2 3 3 3 0 Zinc ribbon domain ZT_dimer PF16916.5 ORF142442 - 0.0016 18.5 2.4 0.0025 17.9 2.4 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter MerT PF02411.15 ORF142247 - 0.027 14.5 0.1 0.033 14.2 0.1 1.1 1 0 0 1 1 1 0 MerT mercuric transport protein DUF3343 PF11823.8 ORF141769 - 5.5e-11 41.8 0.0 6.8e-11 41.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3343) LapA_dom PF06305.11 ORF141235 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Nucleoporin_FG2 PF15967.5 ORF14106 - 0.0016 17.1 0.4 0.0019 16.8 0.4 1.0 1 0 0 1 1 1 1 Nucleoporin FG repeated region Baculo_LEF5 PF04838.12 ORF138636 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF138636 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family LapA_dom PF06305.11 ORF138439 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Asp PF00026.23 ORF138401 - 9.3e-07 28.6 0.0 1e-06 28.4 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF138401 - 5.9e-05 22.9 0.0 6.9e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal APOBEC1 PF18769.1 ORF138231 - 0.11 12.8 0.5 0.16 12.3 0.5 1.3 1 0 0 1 1 1 0 APOBEC1 PapD_C PF02753.17 ORF137982 - 7.7e-05 23.0 0.1 0.00011 22.5 0.1 1.2 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain DUF2428 PF10350.9 ORF137927 - 0.0081 15.5 3.7 0.0094 15.2 3.7 1.0 1 0 0 1 1 1 1 Putative death-receptor fusion protein (DUF2428) Baculo_LEF5 PF04838.12 ORF137813 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF137813 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Stealth_CR3 PF17102.5 ORF13683 - 0.057 13.3 0.8 0.088 12.7 0.8 1.3 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 DUF3165 PF11364.8 ORF135885 - 0.016 15.5 0.6 0.037 14.4 0.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3165) DUF4020 PF13212.6 ORF135629 - 0.069 13.0 0.0 0.072 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4020) DUF4351 PF14261.6 ORF135629 - 5.2 7.2 7.1 47 4.1 6.7 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4351) GST_C_3 PF14497.6 ORF134776 - 1.7e-12 47.3 0.0 1.9e-12 47.2 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF134776 - 4.2e-07 30.1 0.1 6.7e-07 29.4 0.0 1.4 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF134776 - 4.5e-06 26.6 1.7 8.2e-06 25.8 0.1 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF134776 - 0.045 13.5 0.0 0.055 13.3 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Toxin_19 PF08088.12 ORF133341 - 0.00078 19.5 9.4 0.037 14.2 1.2 2.3 2 0 0 2 2 2 2 Conotoxin I-superfamily Dynein_heavy PF03028.15 ORF13329 - 0.1 12.7 0.5 0.13 12.4 0.5 1.2 1 0 0 1 1 1 0 Dynein heavy chain region D6 P-loop domain Ribosomal_L37e PF01907.19 ORF13292 - 0.17 12.1 0.3 0.17 12.1 0.3 2.1 1 1 1 2 2 2 0 Ribosomal protein L37e Cas6_N PF17952.1 ORF132912 - 0.022 15.0 2.3 0.025 14.9 2.3 1.0 1 0 0 1 1 1 0 Cas6 N-terminal domain DUF3297 PF11730.8 ORF132709 - 0.01 15.7 1.6 0.013 15.3 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3297) mRNA_cap_enzyme PF01331.19 ORF132709 - 0.42 10.4 10.9 0.43 10.4 10.9 1.0 1 0 0 1 1 1 0 mRNA capping enzyme, catalytic domain DUF3297 PF11730.8 ORF131752 - 0.01 15.7 1.6 0.013 15.3 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3297) mRNA_cap_enzyme PF01331.19 ORF131752 - 0.42 10.4 10.9 0.43 10.4 10.9 1.0 1 0 0 1 1 1 0 mRNA capping enzyme, catalytic domain DUF1664 PF07889.12 ORF131682 - 0.0049 16.9 2.9 0.005 16.9 2.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) cwf18 PF08315.12 ORF131682 - 0.023 15.3 2.7 0.026 15.2 2.7 1.1 1 0 0 1 1 1 0 cwf18 pre-mRNA splicing factor SRI PF08236.11 ORF131682 - 0.047 13.9 2.1 0.054 13.7 2.1 1.3 1 1 0 1 1 1 0 SRI (Set2 Rpb1 interacting) domain MAGI_u1 PF16663.5 ORF13141 - 0.78 9.9 3.3 1.5 9.0 3.3 1.5 1 0 0 1 1 1 0 Unstructured region on MAGI LapA_dom PF06305.11 ORF131359 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain EF-hand_6 PF13405.6 ORF130870 - 1.4e-15 55.8 3.9 1.7e-07 30.6 0.8 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF130870 - 3.4e-15 54.4 9.7 2.6e-07 29.7 1.3 2.3 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF130870 - 1.3e-12 48.0 7.9 1.5e-12 47.8 7.9 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF130870 - 1.5e-07 30.6 4.9 8.1e-05 21.9 0.4 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF130870 - 8.3e-07 28.8 10.1 0.00013 21.7 2.0 2.2 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF130870 - 0.00017 21.4 6.6 0.028 14.3 0.3 2.2 1 1 1 2 2 2 2 EF hand DUF3887 PF13026.6 ORF130870 - 0.01 16.6 1.0 0.53 11.1 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3887) Caleosin PF05042.13 ORF130870 - 0.036 14.0 2.5 0.16 11.9 0.6 2.0 1 1 1 2 2 2 0 Caleosin related protein EF-hand_4 PF12763.7 ORF130870 - 0.039 13.9 5.5 0.042 13.8 2.1 1.9 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand TM231 PF10149.9 ORF130784 - 1.3e-10 41.1 1.2 1.5e-10 40.9 1.2 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 DUF2157 PF09925.9 ORF129766 - 0.12 12.1 4.6 0.1 12.4 3.9 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) Herpes_LMP1 PF05297.11 ORF129766 - 5.7 6.0 6.7 5.6 6.0 6.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF3217 PF11506.8 ORF129660 - 0.00012 21.9 0.5 0.00021 21.2 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3217) Syd PF07348.12 ORF129517 - 0.084 12.5 0.0 0.095 12.4 0.0 1.1 1 0 0 1 1 1 0 Syd protein (SUKH-2) HpaB PF03241.13 ORF129249 - 0.014 14.5 0.1 0.016 14.3 0.1 1.0 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase C terminal TTL PF03133.15 ORF129162 - 8.4e-09 35.0 0.0 9.1e-09 34.9 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family LPD3 PF18798.1 ORF12864 - 0.02 15.1 0.2 0.023 14.9 0.2 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 3 DUF3475 PF11961.8 ORF12864 - 0.036 14.1 0.0 0.051 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3475) QueH PF02677.14 ORF12864 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Epoxyqueuosine reductase QueH DASH_Dam1 PF08653.10 ORF128576 - 0.014 15.2 0.3 0.028 14.2 0.3 1.5 1 0 0 1 1 1 0 DASH complex subunit Dam1 LapA_dom PF06305.11 ORF127955 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF2384 PF09722.10 ORF127062 - 0.065 13.3 0.0 0.083 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2384) baeRF_family10 PF18854.1 ORF126136 - 0.0088 16.3 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 PMSR PF01625.21 ORF126090 - 6.1e-23 81.7 0.5 6.8e-23 81.5 0.5 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase DUF3008 PF11450.8 ORF125377 - 0.036 14.2 2.1 0.045 13.9 0.2 1.9 2 0 0 2 2 2 0 Protein of unknwon function (DUF3008) RhoGEF67_u1 PF16615.5 ORF125377 - 0.059 13.9 0.0 0.12 12.9 0.0 1.5 1 0 0 1 1 1 0 Unstructured region one on RhoGEF 6 and 7 Phage-tail_3 PF13550.6 ORF125377 - 0.12 12.2 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Putative phage tail protein eIF3m_C_helix PF18005.1 ORF124067 - 0.0047 16.6 0.4 0.0047 16.6 0.4 1.7 2 0 0 2 2 2 1 eIF3 subunit M, C-terminal helix eIF3m_C_helix PF18005.1 ORF122935 - 0.0047 16.6 0.4 0.0047 16.6 0.4 1.7 2 0 0 2 2 2 1 eIF3 subunit M, C-terminal helix SPATA9 PF15824.5 ORF122730 - 4.5 6.5 7.8 0.74 9.0 1.0 2.0 1 1 1 2 2 2 0 Spermatogenesis-associated protein 9 Latarcin PF10279.9 ORF122610 - 0.0097 16.3 0.7 0.014 15.7 0.7 1.3 1 0 0 1 1 1 1 Latarcin precursor ABC_tran_CTD PF16326.5 ORF122610 - 0.045 14.0 1.3 0.24 11.7 0.7 2.0 1 1 1 2 2 2 0 ABC transporter C-terminal domain SLATT_6 PF18169.1 ORF122610 - 0.048 13.3 2.0 0.055 13.1 2.0 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 Tho2 PF11262.8 ORF122610 - 0.074 12.2 4.9 0.081 12.1 4.9 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Thioredoxin_16 PF18569.1 ORF122120 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain YidD PF01809.18 ORF12205 - 3.5e-31 106.9 0.1 4e-31 106.7 0.1 1.0 1 0 0 1 1 1 1 Putative membrane protein insertion efficiency factor K-box PF01486.17 ORF121530 - 0.011 15.9 2.1 0.016 15.3 2.1 1.4 1 1 0 1 1 1 0 K-box region DUF4509 PF14970.6 ORF121530 - 0.033 14.1 0.3 0.034 14.1 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4509) TMEM37 PF15108.6 ORF121472 - 0.0055 16.6 5.1 0.0076 16.1 4.6 1.5 1 1 0 1 1 1 1 Voltage-dependent calcium channel gamma-like subunit protein family Thioredoxin_16 PF18569.1 ORF121437 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain Peptidase_C70 PF12385.8 ORF120731 - 0.15 12.0 2.3 0.53 10.3 1.6 1.8 1 1 0 1 1 1 0 Papain-like cysteine protease AvrRpt2 Baculo_LEF5 PF04838.12 ORF120493 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF120493 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Thioredoxin_16 PF18569.1 ORF120158 - 0.042 14.0 0.2 0.08 13.1 0.2 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain SH3_2 PF07653.17 ORF119599 - 0.11 12.1 0.6 0.14 11.9 0.3 1.6 1 1 0 1 1 1 0 Variant SH3 domain DHODB_Fe-S_bind PF10418.9 ORF119453 - 0.031 14.1 0.2 0.056 13.3 0.2 1.5 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Spc7 PF08317.11 ORF119367 - 0.005 15.8 10.3 0.0051 15.7 10.3 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Fez1 PF06818.15 ORF119367 - 0.0056 17.2 7.7 0.0067 16.9 7.7 1.2 1 0 0 1 1 1 1 Fez1 Flagellin_C PF00700.21 ORF119367 - 0.0083 16.5 0.2 0.011 16.1 0.2 1.2 1 0 0 1 1 1 1 Bacterial flagellin C-terminal helical region DHR10 PF18595.1 ORF119367 - 0.01 15.9 9.4 0.014 15.4 9.4 1.3 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain BLOC1_2 PF10046.9 ORF119367 - 0.01 16.1 6.1 0.01 16.1 6.1 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ZapB PF06005.12 ORF119367 - 0.017 15.5 14.3 0.74 10.3 5.3 2.8 1 1 1 2 2 2 0 Cell division protein ZapB Occludin_ELL PF07303.13 ORF119367 - 0.035 14.8 9.5 0.041 14.6 9.5 1.1 1 0 0 1 1 1 0 Occludin homology domain HMMR_N PF15905.5 ORF119367 - 0.054 13.0 11.1 0.057 12.9 11.1 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF641 PF04859.12 ORF119367 - 0.059 13.7 4.7 0.069 13.5 4.7 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Prominin PF05478.11 ORF119367 - 0.075 11.0 2.5 0.086 10.8 2.5 1.0 1 0 0 1 1 1 0 Prominin TMPIT PF07851.13 ORF119367 - 0.13 11.5 6.7 0.14 11.4 6.7 1.1 1 0 0 1 1 1 0 TMPIT-like protein Fzo_mitofusin PF04799.13 ORF119367 - 0.16 11.5 1.8 0.25 10.9 1.6 1.4 1 1 0 1 1 1 0 fzo-like conserved region AAA_13 PF13166.6 ORF119367 - 0.19 10.4 8.5 0.19 10.3 8.5 1.0 1 0 0 1 1 1 0 AAA domain DUF724 PF05266.14 ORF119367 - 0.2 11.5 7.6 0.23 11.3 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Exonuc_VII_L PF02601.15 ORF119367 - 0.21 11.1 3.4 0.21 11.1 3.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4094 PF13334.6 ORF119367 - 0.26 11.7 1.2 0.35 11.3 1.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) DivIC PF04977.15 ORF119367 - 0.29 10.9 11.0 1.1 9.1 2.3 2.6 1 1 1 2 2 2 0 Septum formation initiator Prefoldin_2 PF01920.20 ORF119367 - 0.3 11.1 13.6 0.48 10.4 2.6 2.1 1 1 1 2 2 2 0 Prefoldin subunit DUF16 PF01519.16 ORF119367 - 0.37 11.3 6.0 0.44 11.0 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 Cep57_MT_bd PF06657.13 ORF119367 - 0.4 11.2 8.8 0.23 11.9 2.1 2.6 1 1 2 3 3 3 0 Centrosome microtubule-binding domain of Cep57 OmpH PF03938.14 ORF119367 - 0.43 10.9 8.6 0.53 10.6 8.6 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) PCRF PF03462.18 ORF119367 - 0.5 10.2 8.3 0.6 9.9 8.3 1.1 1 0 0 1 1 1 0 PCRF domain Tup_N PF08581.10 ORF119367 - 0.52 10.6 13.3 1.3 9.4 5.6 2.1 1 1 1 2 2 2 0 Tup N-terminal DUF4164 PF13747.6 ORF119367 - 0.7 10.2 8.0 2.2 8.6 4.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) UPF0242 PF06785.11 ORF119367 - 1.2 9.2 10.6 1.6 8.8 10.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Ax_dynein_light PF10211.9 ORF119367 - 1.5 8.7 11.4 1.9 8.4 11.4 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain Phage_Mu_Gam PF07352.12 ORF119367 - 1.5 8.7 10.8 7.7 6.4 10.8 1.8 1 1 0 1 1 1 0 Bacteriophage Mu Gam like protein DUF4407 PF14362.6 ORF119367 - 1.6 8.0 4.6 2.1 7.6 4.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) IFP_35_N PF07334.13 ORF119367 - 3.7 7.7 7.4 3.2 7.9 0.5 2.5 2 1 1 3 3 3 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus FapA PF03961.13 ORF119367 - 7.6 5.0 8.9 7.8 5.0 8.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Caf4 PF11615.8 ORF118378 - 0.13 12.2 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 CCR4-associated factor 4 ATE_N PF04376.13 ORF117982 - 0.018 15.4 0.6 0.026 14.9 0.6 1.3 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, N terminus UPF0506 PF11703.8 ORF116634 - 0.19 12.1 6.2 0.61 10.5 1.7 2.4 1 1 1 2 2 2 0 UPF0506 c-SKI_SMAD_bind PF08782.10 ORF116634 - 1.1 9.5 6.1 0.24 11.7 1.3 2.1 1 1 1 2 2 2 0 c-SKI Smad4 binding domain Apis_Csd PF11671.8 ORF116186 - 0.013 15.6 2.9 0.014 15.4 2.9 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein Linker_histone PF00538.19 ORF116186 - 0.068 13.6 0.4 0.13 12.7 0.2 1.5 1 1 0 1 1 1 0 linker histone H1 and H5 family Baculo_LEF5 PF04838.12 ORF115275 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF115275 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family Ubie_methyltran PF01209.18 ORF11525 - 2.7e-32 112.0 0.1 2.9e-32 111.9 0.1 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PXB PF12828.7 ORF115125 - 0.095 12.7 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 PX-associated preSET_CXC PF18264.1 ORF114335 - 0.15 12.5 1.3 0.15 12.5 1.3 1.9 2 0 0 2 2 2 0 CXC domain Baculo_LEF5 PF04838.12 ORF11388 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF11388 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family ABC_tran_CTD PF16326.5 ORF113823 - 0.093 13.0 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 ABC transporter C-terminal domain DUF641 PF04859.12 ORF113541 - 0.012 15.9 3.6 0.015 15.7 3.6 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) MSA-2c PF12238.8 ORF113541 - 0.1 12.6 3.1 0.11 12.5 3.0 1.3 1 1 0 1 1 1 0 Merozoite surface antigen 2c DUF4407 PF14362.6 ORF113541 - 0.9 8.8 4.6 1.1 8.6 4.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Sid-5 PF17204.3 ORF113159 - 0.065 13.4 0.6 0.12 12.6 0.3 1.6 1 1 1 2 2 2 0 Sid-5 family Folliculin_C PF16692.5 ORF112957 - 0.019 14.7 0.2 0.022 14.5 0.2 1.0 1 0 0 1 1 1 0 Folliculin C-terminal domain LapA_dom PF06305.11 ORF112550 - 0.043 13.6 0.9 0.061 13.1 0.9 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Ion_trans PF00520.31 ORF112017 - 0.13 11.5 0.1 0.13 11.4 0.1 1.0 1 0 0 1 1 1 0 Ion transport protein Baculo_LEF5 PF04838.12 ORF111598 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF111598 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family TMEM72 PF16054.5 ORF110741 - 0.011 15.4 0.6 0.011 15.4 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein family 72 SKG6 PF08693.10 ORF110087 - 6.6 6.2 6.0 17 4.9 0.3 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain TMEM72 PF16054.5 ORF10933 - 0.011 15.4 0.6 0.011 15.4 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein family 72 PRD PF00874.20 ORF109062 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 PRD domain Baculo_LEF5 PF04838.12 ORF108768 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF108768 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family CRAM_rpt PF07016.11 ORF108687 - 0.071 12.9 2.0 0.14 12.0 2.0 1.5 1 0 0 1 1 1 0 Cysteine-rich acidic integral membrane protein precursor Baculo_LEF5 PF04838.12 ORF108388 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 XdhC_CoxI PF02625.16 ORF108388 - 0.19 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 XdhC and CoxI family TMF_TATA_bd PF12325.8 ORF108037 - 0.0017 18.6 4.9 0.0031 17.7 5.0 1.3 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding FlxA PF14282.6 ORF108037 - 0.28 11.2 9.1 0.53 10.3 9.1 1.4 1 1 0 1 1 1 0 FlxA-like protein Peptidase_M16_M PF16187.5 ORF107803 - 0.12 11.6 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Middle or third domain of peptidase_M16 zf-piccolo PF05715.13 ORF106838 - 0.026 14.7 0.2 0.86 9.8 0.0 2.2 2 0 0 2 2 2 0 Piccolo Zn-finger DUF4410 PF14366.6 ORF106838 - 0.084 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4410) DZR PF12773.7 ORF106838 - 0.23 11.5 4.4 0.74 9.9 4.4 1.8 1 1 0 1 1 1 0 Double zinc ribbon zf_UBZ PF18439.1 ORF106838 - 0.84 9.3 0.1 0.84 9.3 0.1 2.0 2 1 1 3 3 3 0 Ubiquitin-Binding Zinc Finger Rubredoxin_2 PF18073.1 ORF106838 - 2.4 8.0 5.7 4.4 7.1 0.4 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain SpdB PF05122.13 ORF106698 - 0.0093 16.1 0.1 0.013 15.7 0.1 1.3 1 0 0 1 1 1 1 Mobile element transfer protein Sulfate_transp PF00916.20 ORF106012 - 0.11 11.2 0.0 0.13 11.0 0.0 1.0 1 0 0 1 1 1 0 Sulfate permease family BROMI PF14961.6 ORF105260 - 0.041 11.3 0.8 0.042 11.3 0.8 1.0 1 0 0 1 1 1 0 Broad-minded protein Herpes_UL69 PF05459.12 ORF104270 - 0.0081 15.5 0.3 0.01 15.2 0.3 1.2 1 0 0 1 1 1 1 Herpesvirus transcriptional regulator family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks317.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks317.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks317.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks317.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Collagen_bind_2 PF12904.7 ORF103745 - 0.13 12.2 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Putative collagen-binding domain of a collagenase WAPL PF07814.13 ORF103216 - 0.025 13.4 0.1 0.031 13.1 0.1 1.1 1 0 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin OapA_N PF08525.11 ORF100715 - 0.015 15.2 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif Zw10 PF06248.13 NODE_64469_length_250_cov_0.893023_g56528_i0reverse_frame_1 - 0.043 12.4 0.0 0.049 12.2 0.0 1.0 1 0 0 1 1 1 0 Centromere/kinetochore Zw10 Helicase_C PF00271.31 NODE_64468_length_250_cov_0.911628_g56527_i0reverse_frame_1 - 8.8e-12 45.4 0.0 9.5e-12 45.2 0.0 1.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain FA_hydroxylase PF04116.13 NODE_64468_length_250_cov_0.911628_g56527_i0forward_frame_1 - 0.01 16.2 0.2 0.012 15.9 0.2 1.1 1 0 0 1 1 1 0 Fatty acid hydroxylase superfamily LRR_4 PF12799.7 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_1 - 0.0001 22.6 0.5 0.00015 22.1 0.5 1.2 1 0 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_1 - 0.0023 18.2 0.2 1.6 9.5 0.0 2.3 2 0 0 2 2 2 2 Leucine Rich Repeat LRR_8 PF13855.6 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_1 - 0.0047 16.7 0.1 0.0066 16.2 0.1 1.2 1 0 0 1 1 1 1 Leucine rich repeat LRR_6 PF13516.6 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_1 - 0.043 13.9 0.9 0.69 10.1 0.2 2.3 2 0 0 2 2 2 0 Leucine Rich repeat Gly_reductase PF09338.11 NODE_64462_length_250_cov_1.046512_g56521_i0forward_frame_1 - 0.074 11.4 0.3 0.083 11.3 0.3 1.0 1 0 0 1 1 1 0 Glycine/sarcosine/betaine reductase component B subunits DUF3018 PF11455.8 NODE_64446_length_250_cov_1.181395_g56505_i0forward_frame_1 - 0.16 11.9 1.4 0.45 10.5 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3018) Metallothio_5 PF02067.15 NODE_64441_length_250_cov_1.288372_g56500_i0forward_frame_1 - 0.065 13.4 11.1 0.065 13.4 11.1 1.9 2 0 0 2 2 2 0 Metallothionein family 5 GSH_synth_ATP PF03917.17 NODE_64437_length_250_cov_1.325581_g56496_i0forward_frame_1 - 0.005 15.7 0.0 0.0055 15.5 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain DUF4896 PF16237.5 NODE_64433_length_250_cov_1.367442_g56492_i0forward_frame_1 - 6.7 6.7 9.5 0.54 10.1 3.6 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4896) Rdx PF10262.9 NODE_64431_length_250_cov_1.395349_g56490_i0forward_frame_1 - 0.049 13.8 0.1 0.07 13.3 0.1 1.3 1 0 0 1 1 1 0 Rdx family YesK PF14150.6 NODE_64431_length_250_cov_1.395349_g56490_i0forward_frame_1 - 0.37 11.0 7.8 0.34 11.1 6.0 1.7 1 1 1 2 2 2 0 YesK-like protein TMIE PF16038.5 NODE_64426_length_250_cov_1.502326_g56485_i0forward_frame_1 - 0.43 10.4 2.0 0.59 10.0 2.0 1.2 1 0 0 1 1 1 0 TMIE protein SprA-related PF12118.8 NODE_64424_length_250_cov_1.511628_g56483_i0reverse_frame_1 - 0.84 8.7 2.7 1 8.5 2.7 1.0 1 0 0 1 1 1 0 SprA-related family ZF-HD_dimer PF04770.12 NODE_64419_length_250_cov_1.576744_g56478_i0reverse_frame_1 - 0.002 18.4 0.8 0.002 18.4 0.8 1.7 1 1 1 2 2 2 1 ZF-HD protein dimerisation region DUF2518 PF10726.9 NODE_64418_length_250_cov_1.576744_g56477_i0forward_frame_1 - 0.67 9.6 6.9 0.79 9.4 6.9 1.2 1 0 0 1 1 1 0 Protein of function (DUF2518) AFOR_C PF01314.18 NODE_64404_length_250_cov_1.767442_g56463_i0forward_frame_1 - 0.13 11.2 0.1 0.15 11.0 0.1 1.0 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Pertussis_S2S3 PF02918.15 NODE_64398_length_250_cov_1.846512_g56457_i0reverse_frame_1 - 0.13 12.2 0.0 0.15 12.0 0.0 1.3 1 1 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain DUF4548 PF15081.6 NODE_64392_length_250_cov_1.972093_g56451_i0forward_frame_1 - 0.03 14.1 0.2 0.034 14.0 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4548) Acetyltransf_2 PF00797.17 NODE_64385_length_250_cov_2.130233_g56444_i0reverse_frame_1 - 5.3e-33 114.8 0.0 5.7e-33 114.7 0.0 1.0 1 0 0 1 1 1 1 N-acetyltransferase Transglut_core PF01841.19 NODE_64385_length_250_cov_2.130233_g56444_i0reverse_frame_1 - 0.11 13.0 0.0 0.13 12.8 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily Pkinase PF00069.25 NODE_64382_length_250_cov_2.241860_g56441_i0forward_frame_1 - 8.3e-09 35.2 0.1 8.6e-09 35.1 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_64382_length_250_cov_2.241860_g56441_i0forward_frame_1 - 4e-07 29.6 0.0 4.2e-07 29.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Toxin_12 PF07740.12 NODE_64377_length_250_cov_2.344186_g56436_i0reverse_frame_1 - 0.44 11.3 8.9 0.84 10.4 8.9 1.5 1 0 0 1 1 1 0 Ion channel inhibitory toxin MIF4G PF02854.19 NODE_64369_length_250_cov_2.530233_g56428_i0reverse_frame_1 - 6.9e-06 25.9 0.5 7.1e-06 25.8 0.5 1.0 1 0 0 1 1 1 1 MIF4G domain Cas_Csn2 PF09711.10 NODE_64364_length_250_cov_2.702326_g56423_i0reverse_frame_1 - 0.016 14.8 3.2 1 9.0 1.9 2.1 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_Csn2) BmKX PF09132.10 NODE_64361_length_250_cov_2.790698_g56420_i0reverse_frame_1 - 1.4 9.0 5.5 3.3 7.8 1.2 2.2 2 0 0 2 2 2 0 BmKX Branch_AA_trans PF05525.13 NODE_64359_length_250_cov_2.879070_g56418_i0reverse_frame_1 - 0.0035 16.3 0.3 0.0035 16.3 0.3 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport protein Oxidored_q2 PF00420.24 NODE_64356_length_250_cov_3.125581_g56415_i0reverse_frame_1 - 0.015 14.9 0.7 0.021 14.5 0.7 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NPCC PF08058.11 NODE_64346_length_250_cov_3.572093_g56405_i0forward_frame_1 - 0.63 10.1 6.6 0.74 9.9 6.6 1.1 1 0 0 1 1 1 0 Nuclear pore complex component UPF0561 PF10573.9 NODE_64341_length_250_cov_7.893023_g56400_i0forward_frame_1 - 0.086 13.0 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 BTK PF00779.19 NODE_64339_length_250_cov_21.423256_g56398_i0forward_frame_1 - 0.26 11.1 8.2 0.76 9.6 2.6 2.2 2 0 0 2 2 2 0 BTK motif Argos PF11581.8 NODE_64337_length_250_cov_23.479070_g56396_i0forward_frame_1 - 0.021 14.8 0.6 0.03 14.3 0.6 1.3 1 1 0 1 1 1 0 Antagonist of EGFR signalling, Argos LuxT_C PF18285.1 NODE_64325_length_250_cov_44.497674_g56384_i0reverse_frame_1 - 0.074 13.6 0.1 0.1 13.2 0.1 1.2 1 0 0 1 1 1 0 Tetracycline repressor LuxT C-terminal domain Fer4_9 PF13187.6 NODE_64324_length_250_cov_51.665116_g56383_i0forward_frame_1 - 0.0066 16.6 0.4 0.013 15.6 0.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain TFIIF_alpha PF05793.12 NODE_64318_length_250_cov_56.595349_g56377_i0reverse_frame_1 - 0.12 11.0 1.4 0.11 11.0 1.4 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) MORN PF02493.20 NODE_64315_length_250_cov_61.706977_g56374_i0reverse_frame_1 - 2.4e-07 30.2 1.0 4.1e-06 26.4 0.1 2.3 2 0 0 2 2 2 2 MORN repeat GPDPase_memb PF10110.9 NODE_64312_length_250_cov_69.613953_g56371_i0forward_frame_1 - 0.013 14.3 2.0 0.015 14.1 2.0 1.0 1 0 0 1 1 1 0 Membrane domain of glycerophosphoryl diester phosphodiesterase IncF PF17626.2 NODE_64306_length_250_cov_80.925581_g56365_i0forward_frame_1 - 0.064 13.6 0.0 0.078 13.3 0.0 1.1 1 0 0 1 1 1 0 Inclusion membrane protein F UTP25 PF06862.12 NODE_64305_length_250_cov_81.525581_g56364_i0reverse_frame_1 - 4e-05 22.6 0.0 4.3e-05 22.5 0.0 1.0 1 0 0 1 1 1 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 Mga PF05043.13 NODE_64298_length_250_cov_97.953488_g56357_i0forward_frame_1 - 0.0037 17.8 3.6 0.21 12.2 1.3 2.1 1 1 1 2 2 2 2 Mga helix-turn-helix domain EVI2A PF05399.11 NODE_64296_length_250_cov_103.320930_g56355_i0reverse_frame_1 - 0.022 14.3 0.8 0.025 14.2 0.8 1.0 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) RNA_pol_Rpb1_1 PF04997.12 NODE_64291_length_250_cov_127.916279_g56350_i0forward_frame_1 - 3.9e-09 36.3 0.2 4.5e-09 36.1 0.2 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 Pepsin-I3 PF06394.13 NODE_64291_length_250_cov_127.916279_g56350_i0forward_frame_1 - 0.021 15.0 0.2 0.92 9.7 0.0 2.2 1 1 1 2 2 2 0 Pepsin inhibitor-3-like repeated domain Prominin PF05478.11 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 0.038 11.9 3.5 0.038 11.9 3.5 1.1 1 0 0 1 1 1 0 Prominin Presenilin PF01080.17 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 0.2 10.4 1.9 0.22 10.2 1.9 1.0 1 0 0 1 1 1 0 Presenilin Branch_AA_trans PF05525.13 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 0.57 9.0 9.0 0.64 8.8 9.0 1.0 1 0 0 1 1 1 0 Branched-chain amino acid transport protein YebO PF13974.6 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 0.77 9.9 2.9 1.3 9.1 2.9 1.3 1 0 0 1 1 1 0 YebO-like protein 2TM PF13239.6 NODE_64290_length_250_cov_137.441860_g56349_i0forward_frame_1 - 2.8 8.3 10.2 0.047 14.0 3.1 1.6 2 0 0 2 2 2 0 2TM domain FixS PF03597.15 NODE_64280_length_250_cov_559.274419_g56339_i0forward_frame_1 - 0.052 13.3 0.0 0.081 12.7 0.0 1.3 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type HIG_1_N PF04588.13 NODE_64280_length_250_cov_559.274419_g56339_i0forward_frame_1 - 0.083 13.1 0.0 0.091 13.0 0.0 1.3 1 0 0 1 1 1 0 Hypoxia induced protein conserved region 7TM_GPCR_Srd PF10317.9 NODE_64280_length_250_cov_559.274419_g56339_i0forward_frame_1 - 0.1 11.8 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd DUF3976 PF13121.6 NODE_64280_length_250_cov_559.274419_g56339_i0forward_frame_1 - 0.12 12.5 1.6 0.22 11.7 1.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3976) ABC_membrane PF00664.23 NODE_64274_length_251_cov_0.819444_g56333_i0forward_frame_1 - 2.6e-11 43.7 1.0 3e-11 43.5 1.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Ku_PK_bind PF08785.11 NODE_64274_length_251_cov_0.819444_g56333_i0forward_frame_1 - 0.1 12.7 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 Ku C terminal domain like Ribosomal_L23eN PF03939.13 NODE_64272_length_251_cov_0.921296_g56331_i0reverse_frame_1 - 0.3 11.3 1.2 0.82 9.9 0.1 2.0 2 0 0 2 2 2 0 Ribosomal protein L23, N-terminal domain DUF5408 PF17402.2 NODE_64272_length_251_cov_0.921296_g56331_i0forward_frame_1 - 2.3 8.1 5.0 1.4 8.8 3.2 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5408) Adeno_E3_CR1 PF02440.15 NODE_64271_length_251_cov_0.981481_g56330_i0reverse_frame_1 - 0.066 13.0 0.9 0.084 12.7 0.9 1.1 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 BTG PF07742.12 NODE_64264_length_251_cov_1.101852_g56323_i0reverse_frame_1 - 0.071 13.0 0.0 0.079 12.8 0.0 1.1 1 0 0 1 1 1 0 BTG family A2L_zn_ribbon PF08792.10 NODE_64253_length_251_cov_1.259259_g56312_i0forward_frame_1 - 0.65 9.8 0.1 0.65 9.8 0.1 2.7 3 0 0 3 3 3 0 A2L zinc ribbon domain Secapin PF17521.2 NODE_64252_length_251_cov_1.268519_g56311_i0forward_frame_1 - 0.027 14.3 0.2 0.049 13.4 0.2 1.4 1 0 0 1 1 1 0 Honey bee peptides S-antigen PF05756.11 NODE_64251_length_251_cov_1.268519_g56310_i0reverse_frame_1 - 0.0027 18.0 0.1 0.0032 17.8 0.1 1.1 1 0 0 1 1 1 1 S-antigen protein DUF1494 PF07379.11 NODE_64243_length_251_cov_1.365741_g56302_i0forward_frame_1 - 0.022 14.6 0.0 0.026 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1494) Protoglobin PF11563.8 NODE_64241_length_251_cov_1.393519_g56300_i0forward_frame_1 - 0.032 14.1 0.7 0.034 14.0 0.7 1.0 1 0 0 1 1 1 0 Protoglobin RLI PF04068.15 NODE_64240_length_251_cov_1.421296_g56299_i0reverse_frame_1 - 0.077 12.8 0.3 16 5.4 0.4 2.9 3 0 0 3 3 3 0 Possible Fer4-like domain in RNase L inhibitor, RLI Transcrip_act PF04949.13 NODE_64226_length_251_cov_1.592593_g56285_i0forward_frame_1 - 0.033 14.1 0.1 0.037 13.9 0.1 1.1 1 0 0 1 1 1 0 Transcriptional activator Tugs PF17840.1 NODE_64223_length_251_cov_1.601852_g56282_i0forward_frame_1 - 0.017 15.3 0.1 0.073 13.3 0.0 1.9 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain Cutinase PF01083.22 NODE_64223_length_251_cov_1.601852_g56282_i0forward_frame_1 - 0.081 12.9 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 Cutinase Chor_lyase PF04345.13 NODE_64217_length_251_cov_1.634259_g56276_i0reverse_frame_1 - 0.099 12.3 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Chorismate lyase FYVE PF01363.21 NODE_64217_length_251_cov_1.634259_g56276_i0forward_frame_1 - 0.095 12.9 4.7 0.13 12.5 4.3 1.5 1 1 0 1 1 1 0 FYVE zinc finger TRIQK PF15168.6 NODE_64216_length_251_cov_1.638889_g56275_i0forward_frame_1 - 0.025 14.4 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family FAM165 PF14981.6 NODE_64214_length_251_cov_1.657407_g56273_i0reverse_frame_1 - 0.15 11.9 0.9 10 6.0 0.1 2.3 2 0 0 2 2 2 0 FAM165 family cNMPbd_u2 PF16643.5 NODE_64207_length_251_cov_1.731481_g56266_i0forward_frame_1 - 3 8.3 9.0 3.5 8.1 9.0 1.1 1 0 0 1 1 1 0 Unstructured region on cNMP-binding protein Desulfoferrod_N PF06397.12 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_1 - 0.051 13.2 3.9 0.051 13.2 3.9 1.9 2 1 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Ribosomal_S27e PF01667.17 NODE_64203_length_251_cov_1.814815_g56262_i0forward_frame_1 - 0.077 12.7 0.1 0.077 12.7 0.1 1.9 2 0 0 2 2 2 0 Ribosomal protein S27 Dynamin_N PF00350.23 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 2.5e-20 73.2 0.0 2.8e-20 73.0 0.0 1.0 1 0 0 1 1 1 1 Dynamin family AAA_15 PF13175.6 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.00091 19.0 0.0 0.0011 18.8 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.0016 18.5 0.0 0.0017 18.4 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_21 PF13304.6 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.0042 16.9 0.1 0.005 16.7 0.1 1.3 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Roc PF08477.13 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.04 14.1 0.0 0.046 13.9 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_29 PF13555.6 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.048 13.4 0.0 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.076 13.2 0.0 0.076 13.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.12 11.8 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain FtsK_SpoIIIE PF01580.18 NODE_64199_length_251_cov_1.837963_g56258_i0forward_frame_1 - 0.15 11.4 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family IMP2_C PF18591.1 NODE_64198_length_251_cov_1.925926_g56257_i0forward_frame_1 - 0.091 12.6 0.0 0.7 9.8 0.0 2.1 2 1 0 2 2 2 0 Immune Mapped Protein 2 (IMP2) C-terminal domain DUF5090 PF17009.5 NODE_64193_length_251_cov_2.023148_g56252_i0reverse_frame_1 - 0.026 14.5 0.9 0.03 14.3 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) PetL PF05115.14 NODE_64192_length_251_cov_2.032407_g56251_i0forward_frame_1 - 0.12 12.4 0.2 0.2 11.7 0.2 1.3 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) TMEM132D_C PF15706.5 NODE_64179_length_251_cov_2.375000_g56238_i0reverse_frame_1 - 8.9 6.2 6.2 15 5.4 6.2 1.4 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term WCOR413 PF05562.11 NODE_64179_length_251_cov_2.375000_g56238_i0forward_frame_1 - 0.055 13.4 0.3 0.066 13.1 0.3 1.1 1 0 0 1 1 1 0 Cold acclimation protein WCOR413 AIF-MLS PF14962.6 NODE_64172_length_251_cov_2.555556_g56231_i0forward_frame_1 - 0.089 12.8 3.7 0.059 13.3 2.4 1.4 1 1 0 1 1 1 0 Mitochondria Localisation Sequence ERbeta_N PF12497.8 NODE_64167_length_251_cov_2.638889_g56226_i0reverse_frame_1 - 0.091 12.6 0.1 0.13 12.1 0.1 1.3 1 1 0 1 1 1 0 Estrogen receptor beta KIAA1430 PF13879.6 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.0021 18.8 8.4 0.0028 18.4 8.4 1.2 1 0 0 1 1 1 1 KIAA1430 homologue DUF4200 PF13863.6 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.024 15.0 6.2 0.044 14.2 6.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) GAS PF13851.6 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.032 13.6 10.7 0.039 13.3 10.7 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding HALZ PF02183.18 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.1 12.9 1.8 0.1 12.9 1.8 2.8 1 1 2 3 3 3 0 Homeobox associated leucine zipper Ly49 PF08391.10 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.31 11.4 5.9 0.34 11.3 5.9 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region UPF0242 PF06785.11 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 0.39 10.8 8.0 0.51 10.4 8.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus NYD-SP28_assoc PF14775.6 NODE_64162_length_251_cov_2.888889_g56221_i0reverse_frame_1 - 9.5 6.4 9.1 37 4.5 7.9 2.1 1 1 1 2 2 2 0 Sperm tail C-terminal domain RICTOR_V PF14668.6 NODE_64154_length_251_cov_3.143519_g56213_i0forward_frame_1 - 0.059 13.6 0.1 0.082 13.2 0.1 1.4 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, domain 5 Prominin PF05478.11 NODE_64142_length_251_cov_4.449074_g56201_i0reverse_frame_1 - 0.09 10.7 0.0 0.093 10.7 0.0 1.1 1 0 0 1 1 1 0 Prominin Cyt_bd_oxida_II PF02322.15 NODE_64137_length_251_cov_11.856481_g56196_i0reverse_frame_1 - 0.014 14.8 5.8 0.015 14.6 5.8 1.1 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit II SSP160 PF06933.11 NODE_64137_length_251_cov_11.856481_g56196_i0forward_frame_1 - 0.72 8.0 17.1 0.75 7.9 17.1 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Mucin PF01456.17 NODE_64137_length_251_cov_11.856481_g56196_i0forward_frame_1 - 6.9 6.6 20.7 9 6.3 20.7 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein zf-RING_2 PF13639.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 7e-15 55.1 5.2 9.1e-15 54.7 5.2 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 1.4e-10 40.7 3.1 2.4e-10 40.0 3.1 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 1e-09 38.1 3.9 1.7e-09 37.4 3.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 4.5e-09 36.0 5.6 7e-09 35.4 5.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 1.4e-08 34.7 3.1 2.3e-08 34.0 3.1 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 6.7e-08 32.4 5.7 9.7e-08 31.9 5.7 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 6.9e-08 32.7 7.3 2.7e-07 30.7 7.3 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 1.3e-07 31.4 4.4 1.7e-07 31.0 4.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 2.1e-07 30.8 3.9 3.7e-07 30.1 3.9 1.5 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 5.8e-07 29.3 6.8 2.5e-06 27.2 6.8 1.8 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 3.9e-06 26.9 6.4 2.3e-05 24.5 6.4 2.0 1 1 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 4.4e-06 26.2 3.5 7.9e-06 25.4 3.5 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 5.1e-06 26.3 5.3 2.2e-05 24.3 0.8 2.1 1 1 1 2 2 2 1 Prokaryotic RING finger family 1 RINGv PF12906.7 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 6.4e-05 23.0 6.3 9.6e-05 22.4 6.3 1.3 1 0 0 1 1 1 1 RING-variant domain PHD PF00628.29 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.00014 21.6 4.4 0.00023 21.0 4.4 1.3 1 0 0 1 1 1 1 PHD-finger zf-RING_4 PF14570.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0004 20.1 3.8 0.00052 19.7 3.8 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0009 19.5 7.2 0.0018 18.5 7.2 1.6 1 1 0 1 1 1 1 RING-like domain Zf_RING PF16744.5 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0015 18.6 0.9 0.0015 18.6 0.9 1.9 1 1 1 2 2 2 1 KIAA1045 RING finger zf-UDP PF14569.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0025 17.9 1.0 0.0035 17.4 1.0 1.2 1 0 0 1 1 1 1 Zinc-binding RING-finger C1_1 PF00130.22 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0027 17.5 6.0 0.02 14.8 2.3 2.1 1 1 1 2 2 2 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-Nse PF11789.8 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0059 16.4 1.6 0.0099 15.7 1.6 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.0089 16.2 1.4 0.023 14.8 1.4 1.7 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_9 PF13901.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.016 15.2 4.2 0.021 14.8 4.2 1.2 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zinc_ribbon_15 PF17032.5 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.017 15.8 3.2 0.029 15.1 3.2 1.3 1 0 0 1 1 1 0 zinc-ribbon family zf-RING_6 PF14835.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.022 14.6 1.2 0.032 14.1 1.2 1.3 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-HC5HC2H_2 PF13832.6 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.061 13.5 1.1 0.061 13.5 1.1 1.9 1 1 1 2 2 2 0 PHD-zinc-finger like domain OrfB_Zn_ribbon PF07282.11 NODE_64132_length_251_cov_36.935185_g56191_i0reverse_frame_1 - 0.074 13.0 5.1 0.22 11.5 0.4 2.2 1 1 1 2 2 2 0 Putative transposase DNA-binding domain PglZ PF08665.12 NODE_64131_length_251_cov_42.500000_g56190_i0reverse_frame_1 - 0.095 12.8 2.3 0.11 12.6 2.3 1.0 1 0 0 1 1 1 0 PglZ domain PhnG PF06754.12 NODE_64131_length_251_cov_42.500000_g56190_i0reverse_frame_1 - 0.22 11.5 3.3 0.3 11.0 3.3 1.2 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG HalX PF08663.10 NODE_64131_length_251_cov_42.500000_g56190_i0reverse_frame_1 - 0.52 10.7 8.5 1.6 9.1 1.6 2.2 1 1 1 2 2 2 0 HalX domain CCDC106 PF15794.5 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_1 - 0.27 10.9 35.3 0.37 10.5 35.3 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 TFIIF_alpha PF05793.12 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_1 - 0.87 8.1 37.6 1 7.9 37.6 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) SR-25 PF10500.9 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_1 - 2.8 7.5 60.7 5 6.7 60.7 1.4 1 1 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3807 PF12720.7 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_1 - 5.7 7.2 29.9 7.4 6.8 29.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) DUF1746 PF08508.10 NODE_64130_length_251_cov_44.291667_g56189_i0forward_frame_1 - 0.22 11.9 6.3 0.25 11.7 6.3 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1746) DUF2207 PF09972.9 NODE_64130_length_251_cov_44.291667_g56189_i0forward_frame_1 - 1.1 8.0 1.9 1.1 7.9 1.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4131 PF13567.6 NODE_64130_length_251_cov_44.291667_g56189_i0forward_frame_1 - 3.7 7.2 5.4 5 6.8 5.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) VWC PF00093.18 NODE_64129_length_251_cov_46.828704_g56188_i0forward_frame_1 - 0.035 14.4 1.4 0.049 14.0 1.4 1.2 1 0 0 1 1 1 0 von Willebrand factor type C domain Bap31 PF05529.12 NODE_64128_length_251_cov_47.023148_g56187_i0forward_frame_1 - 0.034 14.0 0.1 0.041 13.7 0.1 1.1 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region DUF4852 PF16144.5 NODE_64127_length_251_cov_47.828704_g56186_i0forward_frame_1 - 0.18 12.0 3.8 0.21 11.7 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4852) Fungal_TACC PF12709.7 NODE_64124_length_251_cov_49.083333_g56183_i0reverse_frame_1 - 0.028 14.8 2.6 0.079 13.4 0.9 2.2 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins PrgI PF12666.7 NODE_64121_length_251_cov_53.435185_g56180_i0forward_frame_1 - 0.41 11.4 4.4 0.49 11.1 4.4 1.2 1 0 0 1 1 1 0 PrgI family protein KSHV_K1 PF11049.8 NODE_64120_length_251_cov_55.402778_g56179_i0reverse_frame_1 - 0.0035 17.3 2.3 0.028 14.4 0.1 2.0 1 1 1 2 2 2 2 Glycoprotein K1 of Kaposi's sarcoma-associated herpes virus DUF4131 PF13567.6 NODE_64111_length_251_cov_62.958333_g56170_i0forward_frame_1 - 0.13 11.9 2.5 0.15 11.7 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) PhoR PF11808.8 NODE_64111_length_251_cov_62.958333_g56170_i0forward_frame_1 - 3.4 8.1 9.9 1.2 9.6 3.3 2.1 1 1 1 2 2 2 0 Phosphate regulon sensor protein PhoR YihI PF04220.12 NODE_64108_length_251_cov_68.888889_g56167_i0reverse_frame_1 - 0.33 10.6 8.0 0.43 10.3 8.0 1.2 1 0 0 1 1 1 0 Der GTPase activator (YihI) Antimicrobial_7 PF08102.11 NODE_64105_length_251_cov_70.587963_g56164_i0reverse_frame_1 - 0.075 13.3 0.2 0.13 12.6 0.2 1.3 1 0 0 1 1 1 0 Scorpion antimicrobial peptide F-box-like PF12937.7 NODE_64102_length_251_cov_80.810185_g56161_i0forward_frame_1 - 0.044 13.7 0.5 0.061 13.2 0.5 1.3 1 0 0 1 1 1 0 F-box-like Tropomyosin_1 PF12718.7 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.0001 22.5 4.2 0.00012 22.2 4.2 1.1 1 0 0 1 1 1 1 Tropomyosin like FAM76 PF16046.5 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.0046 16.3 1.6 0.0048 16.3 1.6 1.0 1 0 0 1 1 1 1 FAM76 protein ERM PF00769.19 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.0068 16.2 1.6 0.0078 16.1 1.6 1.0 1 0 0 1 1 1 1 Ezrin/radixin/moesin family DUF4094 PF13334.6 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.0098 16.3 1.5 0.013 15.9 1.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4094) Csm1_N PF18504.1 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.031 14.6 4.3 2.7 8.4 0.1 2.3 1 1 1 2 2 2 0 Csm1 N-terminal domain XhlA PF10779.9 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.048 13.9 3.1 0.062 13.5 2.6 1.4 1 1 0 1 1 1 0 Haemolysin XhlA DUF4407 PF14362.6 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.099 12.0 2.3 0.11 11.8 2.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Atg14 PF10186.9 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.17 10.9 3.5 0.18 10.8 3.5 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMPIT PF07851.13 NODE_64095_length_251_cov_98.000000_g56154_i0reverse_frame_1 - 0.46 9.7 2.2 0.47 9.6 2.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein DZR PF12773.7 NODE_64091_length_251_cov_106.125000_g56150_i0reverse_frame_1 - 0.053 13.6 1.7 0.14 12.2 1.7 1.8 1 1 0 1 1 1 0 Double zinc ribbon DUF2264 PF10022.9 NODE_64088_length_251_cov_123.587963_g56147_i0forward_frame_1 - 0.00025 20.3 0.0 0.00027 20.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2264) DUF2116 PF09889.9 NODE_64080_length_251_cov_184.328704_g56139_i0reverse_frame_1 - 0.45 10.5 4.1 0.21 11.6 1.2 1.9 1 1 1 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Ank_2 PF12796.7 NODE_64077_length_251_cov_225.069444_g56136_i0reverse_frame_1 - 0.0038 17.8 0.0 0.0053 17.3 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_64077_length_251_cov_225.069444_g56136_i0reverse_frame_1 - 0.0096 16.2 0.0 0.015 15.6 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_64077_length_251_cov_225.069444_g56136_i0reverse_frame_1 - 0.014 16.0 0.0 0.024 15.2 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) DUF4668 PF15701.5 NODE_64075_length_251_cov_319.879630_g56134_i0forward_frame_1 - 0.31 10.8 8.4 0.39 10.5 8.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) TMIE PF16038.5 NODE_64075_length_251_cov_319.879630_g56134_i0forward_frame_1 - 4.3 7.2 10.1 0.46 10.4 3.3 2.0 1 1 1 2 2 2 0 TMIE protein T2SSE_N PF05157.15 NODE_64067_length_252_cov_0.806452_g56126_i0forward_frame_1 - 7.9e-06 26.1 0.0 8.8e-06 25.9 0.0 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein E, N-terminal domain Maelstrom PF13017.6 NODE_64063_length_252_cov_1.000000_g56122_i0forward_frame_1 - 0.22 11.1 3.0 0.25 11.0 3.0 1.0 1 0 0 1 1 1 0 piRNA pathway germ-plasm component Glycos_transf_1 PF00534.20 NODE_64059_length_252_cov_1.050691_g56118_i0reverse_frame_1 - 0.025 14.1 0.1 0.027 14.0 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 TLP1_add_C PF18313.1 NODE_64059_length_252_cov_1.050691_g56118_i0reverse_frame_1 - 0.048 13.6 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Thiolase-like protein type 1 additional C-terminal domain OATP PF03137.20 NODE_64053_length_252_cov_1.152074_g56112_i0forward_frame_1 - 0.0091 14.3 0.5 0.01 14.2 0.5 1.0 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family DUF1298 PF06974.13 NODE_64051_length_252_cov_1.193548_g56110_i0forward_frame_1 - 5.1e-12 46.0 0.0 5.3e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) DCB PF16213.5 NODE_64044_length_252_cov_1.327189_g56103_i0forward_frame_1 - 0.059 13.0 0.1 0.075 12.7 0.1 1.1 1 0 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 LIP PF03583.14 NODE_64040_length_252_cov_1.364055_g56099_i0forward_frame_1 - 0.1 11.9 0.1 0.12 11.7 0.1 1.0 1 0 0 1 1 1 0 Secretory lipase Tnp_P_element_C PF12596.8 NODE_64039_length_252_cov_1.377880_g56098_i0reverse_frame_1 - 0.045 14.3 0.0 0.048 14.2 0.0 1.1 1 0 0 1 1 1 0 87kDa Transposase HrpB2 PF09487.10 NODE_64039_length_252_cov_1.377880_g56098_i0reverse_frame_1 - 0.059 13.8 1.1 0.07 13.6 1.1 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB2) DUF412 PF04217.13 NODE_64038_length_252_cov_1.382488_g56097_i0reverse_frame_1 - 0.09 12.7 0.0 0.091 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF412 N_Asn_amidohyd PF14736.6 NODE_64037_length_252_cov_1.396313_g56096_i0reverse_frame_1 - 0.61 9.2 1.8 0.77 8.9 1.8 1.1 1 0 0 1 1 1 0 Protein N-terminal asparagine amidohydrolase DUF3395 PF11875.8 NODE_64034_length_252_cov_1.428571_g56093_i0reverse_frame_1 - 0.039 13.8 1.0 0.042 13.7 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3395) Actin PF00022.19 NODE_64020_length_252_cov_1.608295_g56079_i0forward_frame_1 - 1.1e-06 27.6 0.0 1.2e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 Actin Urate_ox_N PF06181.11 NODE_64012_length_252_cov_1.741935_g56071_i0reverse_frame_1 - 0.04 13.3 0.2 0.04 13.3 0.2 1.0 1 0 0 1 1 1 0 Urate oxidase N-terminal EamA PF00892.20 NODE_64012_length_252_cov_1.741935_g56071_i0reverse_frame_1 - 0.1 12.8 5.2 0.23 11.6 5.2 1.5 1 1 0 1 1 1 0 EamA-like transporter family DUF1335 PF07056.11 NODE_64009_length_252_cov_1.774194_g56068_i0reverse_frame_1 - 0.17 12.0 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1335) Tropomodulin PF03250.14 NODE_64008_length_252_cov_1.778802_g56067_i0reverse_frame_1 - 0.023 14.8 0.0 0.033 14.2 0.0 1.2 1 0 0 1 1 1 0 Tropomodulin C1_4 PF07975.12 NODE_64008_length_252_cov_1.778802_g56067_i0forward_frame_1 - 0.29 11.4 2.6 0.46 10.7 1.1 1.9 2 0 0 2 2 2 0 TFIIH C1-like domain Lamprin PF06403.11 NODE_64007_length_252_cov_1.783410_g56066_i0reverse_frame_1 - 4.5 7.2 7.3 6.6 6.7 7.3 1.3 1 1 0 1 1 1 0 Lamprin Pkinase_Tyr PF07714.17 NODE_64005_length_252_cov_1.806452_g56064_i0reverse_frame_1 - 2.6e-09 36.7 0.3 2.9e-09 36.6 0.3 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_64005_length_252_cov_1.806452_g56064_i0reverse_frame_1 - 5e-09 35.9 0.2 5.3e-09 35.8 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain RTBV_P46 PF06216.11 NODE_64004_length_252_cov_1.820276_g56063_i0reverse_frame_1 - 0.0076 15.2 0.1 0.0085 15.0 0.1 1.0 1 0 0 1 1 1 1 Rice tungro bacilliform virus P46 protein PRA1 PF03208.19 NODE_63999_length_252_cov_1.843318_g56058_i0reverse_frame_1 - 0.033 13.8 0.9 0.037 13.6 0.9 1.0 1 0 0 1 1 1 0 PRA1 family protein HisKA_2 PF07568.12 NODE_63996_length_252_cov_1.870968_g56055_i0forward_frame_1 - 0.049 13.7 0.3 0.08 13.0 0.3 1.3 1 0 0 1 1 1 0 Histidine kinase DUF2704 PF10866.8 NODE_63996_length_252_cov_1.870968_g56055_i0forward_frame_1 - 0.074 12.9 0.5 0.085 12.7 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2704) DUF1296 PF06972.11 NODE_63996_length_252_cov_1.870968_g56055_i0forward_frame_1 - 0.11 12.7 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1296) PDR_assoc PF08370.11 NODE_63986_length_252_cov_2.082949_g56045_i0forward_frame_1 - 3.1 7.6 9.2 6.1 6.7 9.2 1.5 1 0 0 1 1 1 0 Plant PDR ABC transporter associated PHD_4 PF16866.5 NODE_63979_length_252_cov_2.161290_g56038_i0reverse_frame_1 - 0.061 13.4 0.3 0.091 12.9 0.3 1.2 1 0 0 1 1 1 0 PHD-finger NCD3G PF07562.14 NODE_63978_length_252_cov_2.216590_g56037_i0reverse_frame_1 - 0.011 15.7 0.3 0.017 15.1 0.3 1.3 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR DUF3730 PF12530.8 NODE_63976_length_252_cov_2.235023_g56035_i0forward_frame_1 - 0.097 12.2 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3730) E1-E2_ATPase PF00122.20 NODE_63975_length_252_cov_2.308756_g56034_i0reverse_frame_1 - 0.18 11.3 0.3 0.21 11.1 0.3 1.1 1 0 0 1 1 1 0 E1-E2 ATPase Requiem_N PF14051.6 NODE_63973_length_252_cov_2.405530_g56032_i0forward_frame_1 - 0.018 15.2 0.0 0.023 14.9 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of DPF2/REQ. DUF5579 PF17742.1 NODE_63972_length_252_cov_2.442396_g56031_i0forward_frame_1 - 0.026 14.1 0.0 0.031 13.8 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5579) Amb_V_allergen PF03913.13 NODE_63970_length_252_cov_2.470046_g56029_i0reverse_frame_1 - 0.78 9.7 7.9 2.1 8.4 0.8 2.6 2 1 0 2 2 2 0 Amb V Allergen zf-C2H2_9 PF16293.5 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_1 - 0.18 11.7 2.8 0.14 12.1 0.9 1.7 1 1 1 2 2 2 0 C2H2 type zinc-finger (1 copy) SelK_SelG PF10961.8 NODE_63962_length_252_cov_2.645161_g56021_i0forward_frame_1 - 0.088 13.4 0.0 0.13 12.9 0.0 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG ZZ PF00569.17 NODE_63960_length_252_cov_2.668203_g56019_i0reverse_frame_1 - 0.034 13.9 0.3 0.055 13.3 0.1 1.5 2 0 0 2 2 2 0 Zinc finger, ZZ type Na_K-ATPase PF00287.18 NODE_63960_length_252_cov_2.668203_g56019_i0forward_frame_1 - 0.034 13.3 1.2 0.037 13.2 1.2 1.0 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Peptidase_C2 PF00648.21 NODE_63956_length_252_cov_2.737327_g56015_i0reverse_frame_1 - 1.2e-17 63.9 0.0 1.4e-17 63.6 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease p53-inducible11 PF14936.6 NODE_63955_length_252_cov_2.792627_g56014_i0forward_frame_1 - 0.095 12.8 2.7 0.11 12.6 2.7 1.1 1 0 0 1 1 1 0 Tumour protein p53-inducible protein 11 DUF354 PF04007.12 NODE_63954_length_252_cov_2.889401_g56013_i0reverse_frame_1 - 0.1 11.6 0.1 0.47 9.5 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF354) PhoLip_ATPase_N PF16209.5 NODE_63952_length_252_cov_2.944700_g56011_i0forward_frame_1 - 0.039 13.6 1.3 0.059 13.1 1.3 1.3 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal MCM_lid PF17855.1 NODE_63947_length_252_cov_3.304147_g56006_i0forward_frame_1 - 2.1e-10 40.9 0.6 1.1e-09 38.5 0.3 1.9 2 0 0 2 2 2 1 MCM AAA-lid domain YxiJ PF14176.6 NODE_63945_length_252_cov_3.635945_g56004_i0forward_frame_1 - 0.032 14.7 0.9 0.04 14.4 0.9 1.2 1 0 0 1 1 1 0 YxiJ-like protein FAD_binding_5 PF00941.21 NODE_63943_length_252_cov_4.617512_g56002_i0reverse_frame_1 - 0.2 11.4 0.0 0.22 11.2 0.0 1.0 1 0 0 1 1 1 0 FAD binding domain in molybdopterin dehydrogenase DUF1738 PF08401.11 NODE_63940_length_252_cov_11.147465_g55999_i0reverse_frame_1 - 0.0027 17.8 1.2 0.0067 16.5 0.0 1.8 1 1 0 2 2 2 1 Domain of unknown function (DUF1738) YibE_F PF07907.11 NODE_63933_length_252_cov_25.691244_g55992_i0forward_frame_1 - 0.21 11.0 12.4 0.25 10.8 12.4 1.0 1 0 0 1 1 1 0 YibE/F-like protein TMCCDC2 PF15844.5 NODE_63933_length_252_cov_25.691244_g55992_i0forward_frame_1 - 0.43 10.5 3.9 0.44 10.4 3.9 1.2 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 Ac81 PF05820.11 NODE_63933_length_252_cov_25.691244_g55992_i0forward_frame_1 - 6.1 6.4 9.0 7.1 6.2 9.0 1.2 1 0 0 1 1 1 0 Baculoviridae AC81 DUF493 PF04359.14 NODE_63930_length_252_cov_39.801843_g55989_i0reverse_frame_1 - 5.4e-05 23.7 0.0 6.7e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF493) ACT_4 PF13291.6 NODE_63930_length_252_cov_39.801843_g55989_i0reverse_frame_1 - 0.047 14.3 0.0 0.061 13.9 0.0 1.1 1 0 0 1 1 1 0 ACT domain Planc_extracel PF07595.12 NODE_63930_length_252_cov_39.801843_g55989_i0forward_frame_1 - 0.024 14.4 0.7 0.024 14.4 0.7 2.0 2 0 0 2 2 2 0 Planctomycete extracellular DUF2284 PF10050.9 NODE_63926_length_252_cov_42.857143_g55985_i0forward_frame_1 - 2.8 7.7 7.9 1.9 8.2 6.8 1.3 1 1 0 1 1 1 0 Predicted metal-binding protein (DUF2284) SNAD1 PF18744.1 NODE_63923_length_252_cov_48.672811_g55982_i0reverse_frame_1 - 0.011 15.6 0.9 0.012 15.5 0.9 1.0 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 1 Glyco_hydro_2 PF00703.21 NODE_63923_length_252_cov_48.672811_g55982_i0reverse_frame_1 - 0.88 10.3 7.9 1 10.0 7.9 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 2 Porin_5 PF16930.5 NODE_63923_length_252_cov_48.672811_g55982_i0reverse_frame_1 - 2.7 6.4 6.9 3.1 6.2 6.9 1.0 1 0 0 1 1 1 0 Putative porin DUF4603 PF15376.6 NODE_63923_length_252_cov_48.672811_g55982_i0reverse_frame_1 - 2.9 5.2 12.9 3.6 4.9 12.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) Ank PF00023.30 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.00028 21.2 0.0 0.00045 20.5 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeat Ank_2 PF12796.7 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.00052 20.5 0.0 0.00059 20.4 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.0076 16.6 0.0 0.011 16.1 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.085 13.5 0.0 0.16 12.6 0.0 1.5 1 0 0 1 1 1 0 Ankyrin repeat Ank_4 PF13637.6 NODE_63920_length_252_cov_50.419355_g55979_i0reverse_frame_1 - 0.092 13.4 0.0 0.15 12.7 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) RRM_1 PF00076.22 NODE_63915_length_252_cov_56.668203_g55974_i0forward_frame_1 - 3.6e-05 23.5 0.0 5.8e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 NODE_63915_length_252_cov_56.668203_g55974_i0forward_frame_1 - 0.00071 19.6 0.0 0.0009 19.3 0.0 1.2 1 0 0 1 1 1 1 Limkain b1 Nup35_RRM_2 PF14605.6 NODE_63915_length_252_cov_56.668203_g55974_i0forward_frame_1 - 0.003 17.5 0.0 0.0049 16.8 0.0 1.3 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif CaATP_NAI PF12515.8 NODE_63912_length_252_cov_63.792627_g55971_i0reverse_frame_1 - 0.11 12.1 1.9 0.17 11.6 1.9 1.2 1 0 0 1 1 1 0 Ca2+-ATPase N terminal autoinhibitory domain DUF4124 PF13511.6 NODE_63904_length_252_cov_72.728111_g55963_i0forward_frame_1 - 0.02 15.2 0.3 0.027 14.8 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4124) Oxidored_q5_N PF01059.17 NODE_63898_length_252_cov_86.018433_g55957_i0reverse_frame_1 - 0.36 10.9 11.4 0.41 10.8 11.4 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus DUF1737 PF08410.10 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_1 - 0.008 16.0 8.1 0.25 11.2 0.1 2.9 3 0 0 3 3 3 2 Domain of unknown function (DUF1737) DUF1999 PF09390.10 NODE_63893_length_252_cov_118.276498_g55952_i0forward_frame_1 - 0.086 12.5 0.0 0.096 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) YidD PF01809.18 NODE_63891_length_252_cov_128.050691_g55950_i0reverse_frame_1 - 0.071 13.0 5.7 0.12 12.3 5.7 1.5 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor FAD-SLDH PF12318.8 NODE_63890_length_252_cov_131.566820_g55949_i0reverse_frame_1 - 0.039 14.0 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase Mononeg_RNA_pol PF00946.19 NODE_63883_length_252_cov_276.179724_g55942_i0forward_frame_1 - 0.081 10.5 0.0 0.085 10.5 0.0 1.0 1 0 0 1 1 1 0 Mononegavirales RNA dependent RNA polymerase AAA_8 PF12780.7 NODE_63880_length_252_cov_1413.870968_g55939_i0forward_frame_1 - 0.044 13.1 0.2 0.044 13.1 0.2 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 DUF2102 PF09875.9 NODE_63877_length_252_cov_4346.142857_g55936_i0reverse_frame_1 - 0.03 14.1 0.0 0.042 13.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) PBP_N PF17093.5 NODE_63871_length_253_cov_1.059633_g55930_i0forward_frame_3 - 0.0091 16.3 0.5 0.0094 16.2 0.5 1.1 1 0 0 1 1 1 1 Penicillin-binding protein N-terminus Glyco_hydro_31 PF01055.26 NODE_63868_length_253_cov_1.087156_g55927_i0reverse_frame_3 - 2.4e-11 43.5 0.1 2.7e-11 43.3 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF348 PF03990.14 NODE_63866_length_253_cov_1.096330_g55925_i0reverse_frame_2 - 0.051 13.3 0.2 0.084 12.6 0.2 1.3 1 0 0 1 1 1 0 G5-linked-Ubiquitin-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks318.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks318.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks318.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks318.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3040 PF11239.8 NODE_63858_length_253_cov_1.238532_g55917_i0reverse_frame_2 - 0.021 15.1 0.2 0.033 14.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3040) PCSK9_C3 PF18463.1 NODE_63858_length_253_cov_1.238532_g55917_i0reverse_frame_2 - 0.053 13.8 1.5 0.14 12.4 1.5 1.7 1 1 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain WBP-1 PF11669.8 NODE_63858_length_253_cov_1.238532_g55917_i0forward_frame_2 - 0.039 14.6 0.5 0.054 14.1 0.5 1.3 1 1 0 1 1 1 0 WW domain-binding protein 1 SK_channel PF03530.14 NODE_63853_length_253_cov_1.330275_g55912_i0reverse_frame_2 - 0.015 15.3 0.1 0.021 14.8 0.1 1.3 1 1 0 1 1 1 0 Calcium-activated SK potassium channel DUF5313 PF17240.2 NODE_63852_length_253_cov_1.334862_g55911_i0reverse_frame_2 - 3.1 8.3 6.0 3.7 8.0 6.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Rtt106_N PF18215.1 NODE_63847_length_253_cov_1.431193_g55906_i0reverse_frame_2 - 0.076 12.8 0.2 0.12 12.1 0.2 1.3 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain Glyco_hydro_47 PF01532.20 NODE_63846_length_253_cov_1.449541_g55905_i0reverse_frame_2 - 0.014 14.3 0.1 0.016 14.2 0.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 47 Sugar_tr PF00083.24 NODE_63844_length_253_cov_1.463303_g55903_i0forward_frame_3 - 6.1e-06 25.4 1.0 7.5e-06 25.1 1.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter VEGFR-2_TMD PF17988.1 NODE_63843_length_253_cov_1.463303_g55902_i0reverse_frame_2 - 0.05 13.0 2.1 2.2 7.8 0.5 2.3 2 0 0 2 2 2 0 VEGFR-2 Transmembrane domain MlaE PF02405.16 NODE_63840_length_253_cov_1.509174_g55899_i0forward_frame_2 - 4.2 7.0 10.9 4.7 6.8 10.9 1.1 1 0 0 1 1 1 0 Permease MlaE Abhydro_lipase PF04083.16 NODE_63839_length_253_cov_1.522936_g55898_i0reverse_frame_3 - 0.065 12.8 0.3 0.089 12.4 0.3 1.4 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region zf-RING_2 PF13639.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 3.5e-07 30.4 2.5 3.5e-07 30.4 2.5 1.4 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 1.1e-05 25.6 1.6 2.3e-05 24.6 1.6 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 5.7e-05 22.9 2.8 0.0001 22.1 2.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 7.4e-05 22.7 1.4 0.00012 22.1 1.4 1.3 1 0 0 1 1 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.00013 21.5 1.9 0.00013 21.5 1.9 1.8 2 1 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.00016 21.4 2.3 0.00016 21.4 2.3 1.9 2 1 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.00025 20.8 2.8 0.00043 20.1 2.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.011 15.8 0.9 0.027 14.6 1.0 1.6 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.02 14.9 1.6 0.031 14.3 1.6 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.044 13.7 1.4 0.075 12.9 1.4 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.061 13.3 2.6 0.12 12.4 2.6 1.5 1 0 0 1 1 1 0 zinc-RING finger domain zf-C3H2C3 PF17122.5 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.063 13.3 1.4 0.063 13.3 1.4 1.6 2 0 0 2 2 2 0 Zinc-finger FANCL_C PF11793.8 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.11 12.6 3.0 0.28 11.4 3.0 1.7 1 1 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 NODE_63839_length_253_cov_1.522936_g55898_i0forward_frame_2 - 0.29 11.3 3.3 0.72 10.0 2.1 2.2 2 1 0 2 2 2 0 RING-variant domain DTW PF03942.15 NODE_63838_length_253_cov_1.545872_g55897_i0forward_frame_3 - 0.32 10.7 2.2 0.19 11.4 0.6 1.4 1 1 0 1 1 1 0 DTW domain CSRNP_N PF16019.5 NODE_63837_length_253_cov_1.550459_g55896_i0forward_frame_3 - 0.15 11.9 8.9 0.18 11.7 8.9 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus TRADD_N PF09034.10 NODE_63837_length_253_cov_1.550459_g55896_i0forward_frame_2 - 0.024 14.7 0.4 0.029 14.4 0.4 1.2 1 0 0 1 1 1 0 TRADD, N-terminal domain BIRC6 PF12356.8 NODE_63830_length_253_cov_1.669725_g55889_i0forward_frame_3 - 0.06 12.8 0.4 0.062 12.7 0.4 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 DUF98 PF01947.16 NODE_63827_length_253_cov_1.688073_g55886_i0reverse_frame_3 - 0.013 15.4 0.0 0.016 15.2 0.0 1.0 1 0 0 1 1 1 0 p-hydroxybenzoic acid synthase Aldo_ket_red PF00248.21 NODE_63827_length_253_cov_1.688073_g55886_i0reverse_frame_2 - 3.5e-11 42.9 0.0 1.2e-10 41.1 0.0 1.7 1 1 0 1 1 1 1 Aldo/keto reductase family IF2_N PF04760.15 NODE_63827_length_253_cov_1.688073_g55886_i0reverse_frame_2 - 0.11 12.3 0.2 0.24 11.2 0.2 1.7 1 1 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region SDH_C PF18317.1 NODE_63827_length_253_cov_1.688073_g55886_i0forward_frame_3 - 0.013 15.3 0.3 1.4 8.7 0.1 2.2 2 0 0 2 2 2 0 Shikimate 5'-dehydrogenase C-terminal domain DUF1912 PF08930.10 NODE_63826_length_253_cov_1.697248_g55885_i0forward_frame_3 - 0.016 15.3 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1912) FliD_N PF02465.18 NODE_63826_length_253_cov_1.697248_g55885_i0forward_frame_3 - 0.056 14.1 0.1 0.066 13.9 0.1 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus MTA_R1 PF17226.2 NODE_63824_length_253_cov_1.738532_g55883_i0reverse_frame_2 - 0.0088 16.2 0.3 0.013 15.7 0.3 1.2 1 0 0 1 1 1 1 MTA R1 domain PMT_4TMC PF16192.5 NODE_63824_length_253_cov_1.738532_g55883_i0forward_frame_3 - 0.0022 17.6 1.7 0.0026 17.4 1.7 1.0 1 0 0 1 1 1 1 C-terminal four TMM region of protein-O-mannosyltransferase CCER1 PF15482.6 NODE_63824_length_253_cov_1.738532_g55883_i0forward_frame_3 - 5.5 6.8 7.1 7.3 6.4 7.1 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF5361 PF17318.2 NODE_63821_length_253_cov_1.802752_g55880_i0reverse_frame_3 - 0.057 13.6 0.0 0.068 13.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5361) hGDE_N PF14699.6 NODE_63821_length_253_cov_1.802752_g55880_i0reverse_frame_2 - 0.061 13.5 0.9 0.17 12.1 0.9 1.8 1 1 0 1 1 1 0 N-terminal domain from the human glycogen debranching enzyme CAML PF14963.6 NODE_63821_length_253_cov_1.802752_g55880_i0reverse_frame_2 - 0.082 13.0 0.1 0.098 12.8 0.1 1.0 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand DUF2689 PF10894.8 NODE_63820_length_253_cov_1.825688_g55879_i0reverse_frame_2 - 0.096 12.5 0.9 0.15 11.9 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2689) a_DG1_N2 PF18424.1 NODE_63818_length_253_cov_1.885321_g55877_i0forward_frame_3 - 0.17 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Alpha-Dystroglycan N-terminal domain 2 MASE4 PF17158.4 NODE_63816_length_253_cov_1.903670_g55875_i0reverse_frame_2 - 0.072 12.3 0.1 0.081 12.2 0.1 1.0 1 0 0 1 1 1 0 Membrane-associated sensor, integral membrane domain Kelch_1 PF01344.25 NODE_63815_length_253_cov_1.926606_g55874_i0reverse_frame_3 - 0.0057 16.2 0.0 0.011 15.3 0.0 1.5 1 0 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 NODE_63815_length_253_cov_1.926606_g55874_i0reverse_frame_3 - 0.099 12.7 0.3 0.34 10.9 0.0 2.0 2 0 0 2 2 2 0 Kelch motif Ig_J_chain PF15097.6 NODE_63815_length_253_cov_1.926606_g55874_i0forward_frame_2 - 0.072 13.0 0.8 0.093 12.6 0.8 1.2 1 0 0 1 1 1 0 Immunoglobulin J chain DEC-1_N PF04625.13 NODE_63814_length_253_cov_1.935780_g55873_i0forward_frame_3 - 0.45 9.5 3.9 0.42 9.6 3.9 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DUF5542 PF17696.1 NODE_63809_length_253_cov_2.009174_g55868_i0forward_frame_2 - 1.1 9.4 6.3 2.5 8.3 6.3 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5542) MSA-2c PF12238.8 NODE_63807_length_253_cov_2.068807_g55866_i0reverse_frame_2 - 4.7 7.2 7.7 5.4 7.0 7.7 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c ATP-synt_8 PF00895.20 NODE_63806_length_253_cov_2.096330_g55865_i0reverse_frame_2 - 4 8.0 10.5 8.5 6.9 2.7 2.1 1 1 1 2 2 2 0 ATP synthase protein 8 DUF5626 PF18540.1 NODE_63806_length_253_cov_2.096330_g55865_i0forward_frame_3 - 0.029 14.9 2.8 0.034 14.7 2.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5626) Chordopox_RPO7 PF05864.12 NODE_63805_length_253_cov_2.110092_g55864_i0reverse_frame_3 - 0.042 14.1 0.4 0.059 13.6 0.4 1.3 1 0 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Corona_M PF01635.18 NODE_63802_length_253_cov_2.197248_g55861_i0forward_frame_2 - 2.6 7.3 8.5 2.8 7.2 8.5 1.0 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein Glyco_hydro_49N PF17433.2 NODE_63800_length_253_cov_2.243119_g55859_i0forward_frame_2 - 0.0077 15.9 0.2 0.009 15.7 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 49 N-terminal Ig-like domain VWC PF00093.18 NODE_63793_length_253_cov_2.412844_g55852_i0reverse_frame_3 - 0.024 15.0 1.5 0.034 14.5 1.5 1.3 1 0 0 1 1 1 0 von Willebrand factor type C domain TILa PF12714.7 NODE_63793_length_253_cov_2.412844_g55852_i0reverse_frame_3 - 0.046 13.7 1.3 0.073 13.0 1.3 1.3 1 0 0 1 1 1 0 TILa domain DUF4558 PF15104.6 NODE_63793_length_253_cov_2.412844_g55852_i0reverse_frame_2 - 0.023 14.7 0.3 0.038 14.0 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4558) DDE_Tnp_IS240 PF13610.6 NODE_63793_length_253_cov_2.412844_g55852_i0reverse_frame_2 - 0.054 13.7 0.1 0.06 13.6 0.1 1.1 1 0 0 1 1 1 0 DDE domain DUF4264 PF14084.6 NODE_63791_length_253_cov_2.440367_g55850_i0reverse_frame_3 - 0.019 14.6 2.4 0.23 11.1 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4264) Stomagen PF16851.5 NODE_63783_length_253_cov_2.720183_g55842_i0forward_frame_2 - 0.00047 20.1 0.4 0.00071 19.5 0.4 1.3 1 0 0 1 1 1 1 Stomagen TMEM251 PF15190.6 NODE_63782_length_253_cov_2.743119_g55841_i0reverse_frame_3 - 0.036 14.0 0.0 0.04 13.9 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 251 DUF5538 PF17692.1 NODE_63782_length_253_cov_2.743119_g55841_i0forward_frame_2 - 0.018 15.1 0.8 0.022 14.8 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) Iso_dh PF00180.20 NODE_63780_length_253_cov_3.009174_g55839_i0forward_frame_3 - 1.3e-07 31.1 0.0 1.4e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DUF3364 PF11844.8 NODE_63780_length_253_cov_3.009174_g55839_i0forward_frame_3 - 0.074 13.3 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) Dickkopf_N PF04706.12 NODE_63779_length_253_cov_3.009174_g55838_i0reverse_frame_3 - 0.042 14.3 1.7 0.043 14.3 0.3 1.7 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region AMP-binding PF00501.28 NODE_63779_length_253_cov_3.009174_g55838_i0forward_frame_2 - 6e-17 61.4 0.1 6.5e-17 61.2 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme YHS PF04945.13 NODE_63777_length_253_cov_3.050459_g55836_i0forward_frame_3 - 0.2 11.8 1.4 0.29 11.3 1.4 1.2 1 0 0 1 1 1 0 YHS domain Phage_30_8 PF06019.11 NODE_63777_length_253_cov_3.050459_g55836_i0forward_frame_2 - 0.16 11.9 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Phage GP30.8 protein DUF3287 PF11690.8 NODE_63776_length_253_cov_3.155963_g55835_i0forward_frame_2 - 0.08 12.7 0.0 0.09 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) MRP-L47 PF06984.13 NODE_63775_length_253_cov_3.174312_g55834_i0reverse_frame_2 - 0.1 12.7 0.1 0.4 10.8 0.0 1.8 2 0 0 2 2 2 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) Mito_carr PF00153.27 NODE_63774_length_253_cov_3.224771_g55833_i0reverse_frame_2 - 0.016 15.1 0.0 0.026 14.5 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial carrier protein DZR PF12773.7 NODE_63773_length_253_cov_3.633028_g55832_i0reverse_frame_3 - 0.15 12.1 1.2 9.2 6.4 0.1 2.1 1 1 1 2 2 2 0 Double zinc ribbon FGAR-AT_N PF18076.1 NODE_63773_length_253_cov_3.633028_g55832_i0forward_frame_2 - 0.43 10.6 3.7 9.4 6.3 0.5 2.1 2 0 0 2 2 2 0 Formylglycinamide ribonucleotide amidotransferase N-terminal T2SSppdC PF12528.8 NODE_63772_length_253_cov_3.857798_g55831_i0forward_frame_3 - 0.05 14.4 0.6 0.069 13.9 0.6 1.1 1 0 0 1 1 1 0 Type II secretion prepilin peptidase dependent protein C CDT1 PF08839.11 NODE_63772_length_253_cov_3.857798_g55831_i0forward_frame_3 - 0.06 13.6 3.5 0.071 13.4 3.5 1.1 1 0 0 1 1 1 0 DNA replication factor CDT1 like Phage_1_1 PF08200.11 NODE_63772_length_253_cov_3.857798_g55831_i0forward_frame_2 - 4.4 7.8 8.2 18 5.8 8.0 2.2 1 1 0 1 1 1 0 Bacteriophage 1.1 Protein Band_3_cyto PF07565.13 NODE_63772_length_253_cov_3.857798_g55831_i0forward_frame_2 - 5.9 6.6 8.3 6.5 6.5 8.3 1.0 1 0 0 1 1 1 0 Band 3 cytoplasmic domain ROK PF00480.20 NODE_63770_length_253_cov_4.266055_g55829_i0reverse_frame_3 - 2.8e-25 89.4 2.7 2.9e-25 89.4 2.7 1.0 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 NODE_63770_length_253_cov_4.266055_g55829_i0reverse_frame_3 - 0.00017 20.7 0.1 0.0002 20.5 0.1 1.0 1 0 0 1 1 1 1 Glucokinase TMEMspv1-c74-12 PF11044.8 NODE_63764_length_253_cov_26.761468_g55823_i0reverse_frame_2 - 0.11 12.5 2.1 0.16 11.9 2.1 1.2 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF4668 PF15701.5 NODE_63761_length_253_cov_34.986239_g55820_i0forward_frame_3 - 0.036 13.9 1.7 0.046 13.6 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) Methyltrn_RNA_3 PF02598.17 NODE_63759_length_253_cov_35.972477_g55818_i0forward_frame_2 - 0.022 14.3 0.3 0.024 14.2 0.3 1.0 1 0 0 1 1 1 0 Putative RNA methyltransferase HIP1_clath_bdg PF16515.5 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.00084 19.9 3.9 0.00084 19.9 3.9 1.6 2 0 0 2 2 2 1 Clathrin-binding domain of Huntingtin-interacting protein 1 GAS PF13851.6 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.0056 16.0 15.3 0.0059 16.0 15.3 1.0 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding CENP-F_leu_zip PF10473.9 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.041 13.9 15.7 0.047 13.7 15.7 1.0 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 V_ATPase_I PF01496.19 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.23 9.3 7.2 0.25 9.2 7.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family UPF0242 PF06785.11 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.57 10.3 11.7 0.63 10.1 11.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus NUDE_C PF04880.13 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 0.61 10.5 11.1 0.17 12.3 5.9 1.9 1 1 1 2 2 2 0 NUDE protein, C-terminal conserved region HSP70 PF00012.20 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 1.2 7.2 8.2 1.3 7.1 8.2 1.0 1 0 0 1 1 1 0 Hsp70 protein Swi5 PF07061.11 NODE_63758_length_253_cov_37.045872_g55817_i0reverse_frame_2 - 7.6 6.7 12.0 1.1 9.4 2.9 2.0 1 1 1 2 2 2 0 Swi5 DUF1133 PF06576.11 NODE_63756_length_253_cov_40.348624_g55815_i0reverse_frame_2 - 8.4e-05 22.0 1.3 9.5e-05 21.9 1.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1133) EamA PF00892.20 NODE_63753_length_253_cov_45.229358_g55812_i0reverse_frame_2 - 0.001 19.2 1.4 0.0012 19.0 1.4 1.1 1 0 0 1 1 1 1 EamA-like transporter family STG PF15809.5 NODE_63749_length_253_cov_58.119266_g55808_i0forward_frame_3 - 0.036 14.2 0.0 0.041 13.9 0.0 1.1 1 0 0 1 1 1 0 Simian taste bud-specific gene product family DUF4064 PF13273.6 NODE_63748_length_253_cov_61.403670_g55807_i0reverse_frame_3 - 0.053 13.8 3.3 0.089 13.1 3.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) UK PF02512.14 NODE_63747_length_253_cov_63.334862_g55806_i0reverse_frame_2 - 0.71 10.4 4.7 15 6.2 0.1 2.1 1 1 1 2 2 2 0 Virulence determinant FLYWCH PF04500.16 NODE_63747_length_253_cov_63.334862_g55806_i0forward_frame_3 - 0.071 13.2 1.1 0.13 12.4 1.1 1.5 1 0 0 1 1 1 0 FLYWCH zinc finger domain Transmemb_17 PF09799.9 NODE_63746_length_253_cov_65.573394_g55805_i0forward_frame_2 - 8.9e-09 35.9 0.2 1e-08 35.7 0.2 1.2 1 0 0 1 1 1 1 Predicted membrane protein HR1 PF02185.16 NODE_63743_length_253_cov_68.463303_g55802_i0forward_frame_2 - 0.014 15.5 1.1 0.014 15.5 1.1 2.1 1 1 1 2 2 2 0 Hr1 repeat Glyco_transf_54 PF04666.13 NODE_63742_length_253_cov_74.481651_g55801_i0forward_frame_3 - 0.085 11.7 0.4 0.098 11.5 0.4 1.0 1 0 0 1 1 1 0 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region Peptidase_C31 PF05410.13 NODE_63742_length_253_cov_74.481651_g55801_i0forward_frame_2 - 0.0023 18.0 0.0 0.0028 17.7 0.0 1.1 1 0 0 1 1 1 1 Porcine arterivirus-type cysteine proteinase alpha Toxin_18 PF08087.11 NODE_63741_length_253_cov_83.077982_g55800_i0reverse_frame_2 - 0.011 15.7 2.2 0.011 15.7 2.2 2.3 2 1 1 3 3 3 0 Conotoxin O-superfamily zf-C4_Topoisom PF01396.19 NODE_63740_length_253_cov_87.247706_g55799_i0forward_frame_3 - 0.048 13.5 1.5 0.076 12.8 1.5 1.3 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Gliadin PF13016.6 NODE_63736_length_253_cov_101.155963_g55795_i0forward_frame_2 - 0.052 14.0 0.2 0.071 13.5 0.2 1.2 1 0 0 1 1 1 0 Cys-rich Gliadin N-terminal G10 PF01125.17 NODE_63731_length_253_cov_122.610092_g55790_i0forward_frame_3 - 3.4 7.4 8.1 0.49 10.2 0.9 2.0 1 1 1 2 2 2 0 G10 protein Ntox28 PF15605.6 NODE_63730_length_253_cov_123.894495_g55789_i0reverse_frame_3 - 0.047 13.9 0.1 0.056 13.7 0.1 1.3 1 1 0 1 1 1 0 Bacterial toxin 28 HTH_9 PF08221.11 NODE_63729_length_253_cov_125.637615_g55788_i0forward_frame_2 - 0.14 12.3 0.0 0.6 10.2 0.0 1.8 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain 2OG-FeII_Oxy_3 PF13640.6 NODE_63727_length_253_cov_159.357798_g55786_i0reverse_frame_2 - 4.2e-06 27.6 0.0 5e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 NODE_63727_length_253_cov_159.357798_g55786_i0reverse_frame_2 - 0.013 15.9 0.0 0.019 15.4 0.0 1.2 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy_4 PF13661.6 NODE_63727_length_253_cov_159.357798_g55786_i0reverse_frame_2 - 0.087 13.5 0.0 0.11 13.2 0.0 1.1 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily DUF5523 PF17661.1 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.23 11.1 13.4 0.25 11.0 13.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5523) CobT PF06213.12 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.33 10.3 15.0 0.33 10.3 15.0 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT SDA1 PF05285.12 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.44 9.9 18.6 0.52 9.7 18.6 1.2 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.57 8.3 20.4 0.6 8.3 20.4 1.0 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 0.7 8.1 15.1 0.7 8.1 15.1 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF913 PF06025.12 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 1 8.3 5.1 1.2 8.1 5.1 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) YL1 PF05764.13 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 1.6 8.8 18.4 1.8 8.6 18.4 1.1 1 0 0 1 1 1 0 YL1 nuclear protein DNA_pol_phi PF04931.13 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 1.7 6.6 23.1 1.8 6.6 23.1 1.0 1 0 0 1 1 1 0 DNA polymerase phi TRAP_alpha PF03896.16 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 3.2 6.9 11.5 3.3 6.8 11.5 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Tim54 PF11711.8 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 3.4 6.4 9.2 3.8 6.2 9.2 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Presenilin PF01080.17 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 8.5 5.0 5.6 8.4 5.0 5.6 1.0 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 8.6 5.5 5.5 8.8 5.4 5.5 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Roughex PF06020.11 NODE_63726_length_253_cov_172.642202_g55785_i0forward_frame_2 - 10 5.1 11.9 11 5.1 11.9 1.1 1 0 0 1 1 1 0 Drosophila roughex protein YqgC PF17430.2 NODE_63719_length_253_cov_612.311927_g55778_i0forward_frame_3 - 0.16 12.1 0.1 0.23 11.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized YqgC-like YqgC PF17430.2 NODE_63718_length_253_cov_664.004587_g55777_i0reverse_frame_3 - 0.16 12.1 0.1 0.23 11.6 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized YqgC-like NinF PF05810.12 NODE_63718_length_253_cov_664.004587_g55777_i0forward_frame_2 - 0.12 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 NinF protein DUF3482 PF11981.8 NODE_63716_length_253_cov_25627.298165_g55775_i0forward_frame_2 - 0.058 12.8 8.7 0.072 12.5 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) DUF3482 PF11981.8 NODE_63715_length_253_cov_25627.458716_g55774_i0forward_frame_2 - 0.057 12.8 8.7 0.072 12.5 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) YqzE PF14038.6 NODE_63711_length_254_cov_1.031963_g55770_i0reverse_frame_3 - 0.00043 20.2 0.7 0.00065 19.6 0.7 1.3 1 0 0 1 1 1 1 YqzE-like protein DUF5456 PF17539.2 NODE_63711_length_254_cov_1.031963_g55770_i0reverse_frame_3 - 0.04 13.8 0.8 0.042 13.7 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5456) Erg28 PF03694.13 NODE_63710_length_254_cov_1.063927_g55769_i0forward_frame_3 - 0.88 10.0 6.9 3.2 8.2 6.9 1.8 1 1 0 1 1 1 0 Erg28 like protein NTS_2 PF15448.6 NODE_63709_length_254_cov_1.091324_g55768_i0reverse_frame_3 - 0.039 14.4 0.4 0.072 13.5 0.4 1.4 1 0 0 1 1 1 0 N-terminal segments of P. falciparum erythrocyte membrane protein TUDOR PF00567.24 NODE_63709_length_254_cov_1.091324_g55768_i0reverse_frame_2 - 0.099 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Tudor domain DsbD PF02683.15 NODE_63707_length_254_cov_1.095890_g55766_i0reverse_frame_2 - 0.041 13.8 0.4 0.043 13.7 0.4 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region FeS PF04060.13 NODE_63707_length_254_cov_1.095890_g55766_i0reverse_frame_2 - 0.37 10.5 5.6 0.84 9.4 5.6 1.5 1 0 0 1 1 1 0 Putative Fe-S cluster DUF2670 PF10875.8 NODE_63707_length_254_cov_1.095890_g55766_i0forward_frame_3 - 0.15 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) DUF4291 PF14124.6 NODE_63706_length_254_cov_1.095890_g55765_i0forward_frame_2 - 0.18 11.6 0.2 0.24 11.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4291) Baculo_p48 PF04878.13 NODE_63705_length_254_cov_1.123288_g55764_i0reverse_frame_3 - 0.037 13.0 0.3 0.044 12.7 0.3 1.0 1 0 0 1 1 1 0 Baculovirus P48 protein DUF1106 PF06523.11 NODE_63703_length_254_cov_1.132420_g55762_i0reverse_frame_3 - 0.079 13.0 0.2 0.11 12.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1106) DUF3876 PF12992.7 NODE_63703_length_254_cov_1.132420_g55762_i0reverse_frame_3 - 0.17 12.0 1.0 15 5.7 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3876) Opiods_neuropep PF01160.18 NODE_63703_length_254_cov_1.132420_g55762_i0reverse_frame_2 - 1.2 9.3 11.2 3.2 7.9 1.7 2.4 2 0 0 2 2 2 0 Vertebrate endogenous opioids neuropeptide zf-C2H2_4 PF13894.6 NODE_63702_length_254_cov_1.155251_g55761_i0reverse_frame_2 - 0.16 12.9 3.2 0.29 12.1 3.2 1.4 1 0 0 1 1 1 0 C2H2-type zinc finger SIL1 PF16782.5 NODE_63700_length_254_cov_1.200913_g55759_i0reverse_frame_3 - 0.024 13.8 0.3 0.025 13.8 0.3 1.1 1 0 0 1 1 1 0 Nucleotide exchange factor SIL1 Methyltrn_RNA_2 PF04013.12 NODE_63700_length_254_cov_1.200913_g55759_i0reverse_frame_2 - 0.13 12.0 0.3 0.17 11.6 0.1 1.4 1 1 0 1 1 1 0 Putative SAM-dependent RNA methyltransferase DM4_12 PF07841.13 NODE_63699_length_254_cov_1.228311_g55758_i0reverse_frame_2 - 0.092 13.4 0.6 0.13 13.0 0.6 1.3 1 0 0 1 1 1 0 DM4/DM12 family Med23 PF11573.8 NODE_63698_length_254_cov_1.237443_g55757_i0forward_frame_2 - 0.017 12.8 0.5 0.018 12.8 0.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 23 TP2 PF01254.18 NODE_63693_length_254_cov_1.305936_g55752_i0forward_frame_3 - 0.2 12.3 4.1 0.24 12.0 4.1 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 Chitin_synth_1 PF01644.17 NODE_63691_length_254_cov_1.324201_g55750_i0reverse_frame_3 - 1.4e-14 54.4 0.0 1.5e-14 54.3 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Tat PF00539.18 NODE_63691_length_254_cov_1.324201_g55750_i0forward_frame_2 - 1.2 9.4 4.5 2.5 8.3 4.6 1.7 1 1 0 1 1 1 0 Transactivating regulatory protein (Tat) FOLN PF09289.10 NODE_63689_length_254_cov_1.333333_g55748_i0reverse_frame_2 - 0.035 14.3 5.1 0.061 13.5 5.1 1.5 1 0 0 1 1 1 0 Follistatin/Osteonectin-like EGF domain DUF2197 PF09963.9 NODE_63687_length_254_cov_1.369863_g55746_i0reverse_frame_3 - 0.057 13.7 0.7 0.098 12.9 0.7 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) DUF1451 PF07295.11 NODE_63687_length_254_cov_1.369863_g55746_i0forward_frame_2 - 0.072 13.1 0.2 0.082 12.9 0.2 1.0 1 0 0 1 1 1 0 Zinc-ribbon containing domain CLZ PF16526.5 NODE_63687_length_254_cov_1.369863_g55746_i0forward_frame_2 - 0.099 13.0 0.3 3.6 8.0 0.0 2.0 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels H2O2_YaaD PF03883.14 NODE_63684_length_254_cov_1.397260_g55743_i0forward_frame_3 - 0.13 11.8 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Peroxide stress protein YaaA Regnase_1_C PF18561.1 NODE_63682_length_254_cov_1.410959_g55741_i0reverse_frame_3 - 0.1 12.3 0.2 0.21 11.4 0.2 1.5 1 1 0 1 1 1 0 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain FhuF_C PF11575.8 NODE_63682_length_254_cov_1.410959_g55741_i0forward_frame_3 - 0.024 14.6 4.4 0.06 13.3 4.4 1.8 1 0 0 1 1 1 0 FhuF 2Fe-2S C-terminal domain MerC PF03203.14 NODE_63681_length_254_cov_1.410959_g55740_i0forward_frame_2 - 0.035 14.6 1.5 0.042 14.3 1.5 1.3 1 1 0 1 1 1 0 MerC mercury resistance protein HBD PF18534.1 NODE_63675_length_254_cov_1.461187_g55734_i0forward_frame_2 - 0.0062 16.6 0.0 0.0074 16.4 0.0 1.1 1 0 0 1 1 1 1 Helical bundle domain FAT PF02259.23 NODE_63673_length_254_cov_1.461187_g55732_i0forward_frame_3 - 0.022 14.0 0.2 0.022 14.0 0.2 1.1 1 0 0 1 1 1 0 FAT domain TGT PF01702.18 NODE_63672_length_254_cov_1.493151_g55731_i0reverse_frame_3 - 0.15 11.2 2.3 0.18 11.0 2.3 1.1 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase RST PF12174.8 NODE_63672_length_254_cov_1.493151_g55731_i0forward_frame_3 - 0.071 13.0 0.2 0.12 12.3 0.2 1.4 1 0 0 1 1 1 0 RCD1-SRO-TAF4 (RST) plant domain DUF3945 PF13101.6 NODE_63671_length_254_cov_1.511416_g55730_i0reverse_frame_3 - 0.073 12.8 0.0 0.091 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3945) ABC_membrane PF00664.23 NODE_63671_length_254_cov_1.511416_g55730_i0forward_frame_3 - 1.4e-06 28.2 0.2 1.5e-06 28.1 0.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region QueF PF14489.6 NODE_63669_length_254_cov_1.552511_g55728_i0forward_frame_3 - 0.017 15.2 0.5 0.083 13.1 0.1 2.0 1 1 1 2 2 2 0 QueF-like protein Clat_adaptor_s PF01217.20 NODE_63669_length_254_cov_1.552511_g55728_i0forward_frame_3 - 0.058 13.3 1.2 0.07 13.1 1.2 1.3 1 1 0 1 1 1 0 Clathrin adaptor complex small chain DUF3310 PF11753.8 NODE_63667_length_254_cov_1.593607_g55726_i0reverse_frame_3 - 0.024 14.8 0.3 0.031 14.5 0.3 1.3 1 0 0 1 1 1 0 Protein of unknwon function (DUF3310) Pes-10 PF07149.11 NODE_63667_length_254_cov_1.593607_g55726_i0reverse_frame_2 - 4.6 6.2 6.1 5.2 6.0 6.1 1.0 1 0 0 1 1 1 0 Pes-10 AFP_2 PF18815.1 NODE_63666_length_254_cov_1.607306_g55725_i0reverse_frame_3 - 0.014 15.7 0.3 0.024 14.9 0.3 1.5 1 0 0 1 1 1 0 Bacterial antifreeze protein repeat 7TMR-DISM_7TM PF07695.11 NODE_63664_length_254_cov_1.625571_g55723_i0forward_frame_3 - 0.082 12.8 2.9 0.092 12.6 2.9 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling DUF3090 PF11290.8 NODE_63655_length_254_cov_1.812785_g55714_i0reverse_frame_2 - 0.092 12.6 0.2 0.11 12.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3090) Prok-RING_1 PF14446.6 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.00026 20.8 4.7 0.00033 20.5 4.7 1.1 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 zf-RING_11 PF17123.5 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.00031 20.4 5.8 0.00054 19.7 5.8 1.4 1 0 0 1 1 1 1 RING-like zinc finger PHD PF00628.29 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.00089 19.1 5.0 0.0012 18.7 5.0 1.2 1 0 0 1 1 1 1 PHD-finger C1_1 PF00130.22 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.0025 17.7 2.5 0.0033 17.3 2.5 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RING_2 PF13639.6 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.0031 17.8 5.8 0.0042 17.4 5.8 1.2 1 0 0 1 1 1 1 Ring finger domain C1_2 PF03107.16 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.0036 17.6 1.7 0.0043 17.3 1.7 1.1 1 0 0 1 1 1 1 C1 domain Zn_ribbon_17 PF17120.5 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.025 14.2 3.4 0.034 13.8 3.4 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type PHD_4 PF16866.5 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.098 12.8 5.7 1 9.5 1.7 2.1 1 1 1 2 2 2 0 PHD-finger Zf_RING PF16744.5 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.11 12.6 3.1 0.16 12.1 3.1 1.4 1 0 0 1 1 1 0 KIAA1045 RING finger zf-C3HC4_2 PF13923.6 NODE_63648_length_254_cov_1.885845_g55707_i0reverse_frame_2 - 0.3 11.0 5.3 0.48 10.3 5.3 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Kisspeptin PF15152.6 NODE_63641_length_254_cov_2.031963_g55700_i0forward_frame_3 - 0.13 13.0 0.2 0.17 12.7 0.2 1.2 1 0 0 1 1 1 0 Kisspeptin PSI_integrin PF17205.3 NODE_63640_length_254_cov_2.041096_g55699_i0reverse_frame_2 - 0.056 13.2 1.9 0.082 12.7 1.9 1.3 1 0 0 1 1 1 0 Integrin plexin domain Peptidase_S21 PF00716.17 NODE_63640_length_254_cov_2.041096_g55699_i0reverse_frame_2 - 0.12 12.0 2.6 0.14 11.8 2.6 1.0 1 0 0 1 1 1 0 Assemblin (Peptidase family S21) zf-U1 PF06220.12 NODE_63640_length_254_cov_2.041096_g55699_i0reverse_frame_2 - 0.3 10.9 3.1 0.68 9.7 0.4 2.2 2 0 0 2 2 2 0 U1 zinc finger Qn_am_d_aII PF14930.6 NODE_63640_length_254_cov_2.041096_g55699_i0forward_frame_2 - 0.042 14.2 0.2 0.048 14.0 0.2 1.1 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain II zf-ANAPC11 PF12861.7 NODE_63638_length_254_cov_2.105023_g55697_i0reverse_frame_2 - 0.4 10.8 8.0 0.7 10.0 8.0 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger SPRR2 PF14820.6 NODE_63638_length_254_cov_2.105023_g55697_i0forward_frame_3 - 7.6 6.7 12.4 0.92 9.6 7.5 1.9 1 1 0 1 1 1 0 Small proline-rich 2 DUF975 PF06161.11 NODE_63637_length_254_cov_2.114155_g55696_i0forward_frame_3 - 0.036 13.8 5.7 0.042 13.6 5.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF975) DUF3599 PF12206.8 NODE_63636_length_254_cov_2.127854_g55695_i0reverse_frame_3 - 0.068 13.5 0.1 0.11 12.8 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3599) Kelch_6 PF13964.6 NODE_63635_length_254_cov_2.168950_g55694_i0forward_frame_3 - 0.059 13.7 0.2 0.1 12.9 0.2 1.4 1 1 0 1 1 1 0 Kelch motif Chrome_Resist PF09828.9 NODE_63635_length_254_cov_2.168950_g55694_i0forward_frame_2 - 0.023 15.1 0.4 0.025 15.0 0.4 1.1 1 0 0 1 1 1 0 Chromate resistance exported protein KASH_CCD PF14662.6 NODE_63632_length_254_cov_2.296804_g55691_i0reverse_frame_2 - 0.044 13.6 8.7 0.3 10.9 8.7 1.9 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH UBN_AB PF14075.6 NODE_63632_length_254_cov_2.296804_g55691_i0reverse_frame_2 - 0.054 13.2 4.4 0.046 13.4 2.3 1.7 1 1 1 2 2 2 0 Ubinuclein conserved middle domain OmpH PF03938.14 NODE_63632_length_254_cov_2.296804_g55691_i0reverse_frame_2 - 0.32 11.3 7.0 0.36 11.2 7.0 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Fungal_TACC PF12709.7 NODE_63632_length_254_cov_2.296804_g55691_i0reverse_frame_2 - 0.37 11.3 8.6 0.42 11.1 3.7 2.1 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins GTPase_binding PF09027.10 NODE_63630_length_254_cov_2.433790_g55689_i0reverse_frame_3 - 0.51 10.4 2.7 8.3 6.5 0.3 2.3 2 0 0 2 2 2 0 GTPase binding Fimbrial PF00419.20 NODE_63630_length_254_cov_2.433790_g55689_i0forward_frame_3 - 2.4e-06 27.9 0.4 2.6e-06 27.8 0.4 1.0 1 0 0 1 1 1 1 Fimbrial protein Cactin_mid PF10312.9 NODE_63628_length_254_cov_2.493151_g55687_i0forward_frame_2 - 0.035 13.8 0.6 0.035 13.8 0.6 1.1 1 0 0 1 1 1 0 Conserved mid region of cactin zf-HC5HC2H_2 PF13832.6 NODE_63624_length_254_cov_2.817352_g55683_i0reverse_frame_2 - 0.0041 17.3 0.2 0.0045 17.1 0.2 1.1 1 0 0 1 1 1 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 NODE_63624_length_254_cov_2.817352_g55683_i0reverse_frame_2 - 0.011 16.0 0.7 0.012 15.8 0.7 1.2 1 0 0 1 1 1 0 PHD-like zinc-binding domain Colipase-like PF15083.6 NODE_63623_length_254_cov_2.945205_g55682_i0forward_frame_3 - 0.037 14.2 0.1 0.04 14.0 0.1 1.2 1 0 0 1 1 1 0 Colipase-like Dicer_dimer PF03368.14 NODE_63623_length_254_cov_2.945205_g55682_i0forward_frame_3 - 0.056 13.6 0.0 0.064 13.4 0.0 1.2 1 0 0 1 1 1 0 Dicer dimerisation domain TfuA PF07812.12 NODE_63621_length_254_cov_3.159817_g55680_i0reverse_frame_3 - 0.065 13.0 0.0 0.075 12.8 0.0 1.3 1 0 0 1 1 1 0 TfuA-like protein zf-C3HC4_3 PF13920.6 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 9.2e-05 22.2 11.0 0.00014 21.6 11.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) TMEM125 PF15109.6 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 0.021 15.2 0.1 0.024 15.0 0.1 1.1 1 0 0 1 1 1 0 TMEM125 protein family zf-C3HC4_4 PF15227.6 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 0.082 13.1 13.2 0.34 11.1 13.2 1.9 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 0.088 12.9 6.6 0.15 12.1 6.6 1.6 1 1 0 1 1 1 0 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 0.21 11.6 11.6 0.17 11.8 9.9 1.7 2 0 0 2 2 2 0 zinc-RING finger domain zf-P11 PF03854.14 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 4.3 7.1 12.8 7 6.4 10.6 2.0 1 1 1 2 2 2 0 P-11 zinc finger MCR PF18509.1 NODE_63618_length_254_cov_3.328767_g55677_i0forward_frame_3 - 7.4 6.2 7.2 0.47 10.1 0.8 2.2 2 0 0 2 2 2 0 Magnetochrome domain Plant_zn_clust PF10533.9 NODE_63616_length_254_cov_3.611872_g55675_i0reverse_frame_2 - 2 8.4 17.1 0.095 12.7 9.9 2.0 2 0 0 2 2 2 0 Plant zinc cluster domain SVM_signal PF12113.8 NODE_63615_length_254_cov_3.721461_g55674_i0forward_frame_3 - 0.47 10.4 9.5 2.1 8.3 1.3 2.4 2 0 0 2 2 2 0 SVM protein signal sequence ARHGEF5_35 PF15441.6 NODE_63614_length_254_cov_3.803653_g55673_i0forward_frame_3 - 0.019 14.0 0.7 0.021 13.9 0.7 1.0 1 0 0 1 1 1 0 Rho guanine nucleotide exchange factor 5/35 DUF4123 PF13503.6 NODE_63614_length_254_cov_3.803653_g55673_i0forward_frame_3 - 0.082 13.3 0.0 0.091 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4123) DUF3453 PF11935.8 NODE_63611_length_254_cov_4.739726_g55670_i0reverse_frame_2 - 0.0049 16.5 0.2 0.0055 16.4 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3453) Rhv PF00073.20 NODE_63607_length_254_cov_22.374429_g55666_i0reverse_frame_2 - 0.095 12.3 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 picornavirus capsid protein Baculo_helicase PF04735.12 NODE_63604_length_254_cov_34.182648_g55663_i0forward_frame_2 - 0.0019 15.9 0.3 0.002 15.8 0.3 1.0 1 0 0 1 1 1 1 Baculovirus DNA helicase FMO-like PF00743.19 NODE_63603_length_254_cov_36.844749_g55662_i0reverse_frame_3 - 0.0085 14.6 0.4 0.01 14.3 0.4 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like RGM_C PF06534.13 NODE_63603_length_254_cov_36.844749_g55662_i0reverse_frame_2 - 0.029 13.9 0.7 0.036 13.6 0.7 1.2 1 0 0 1 1 1 0 Repulsive guidance molecule (RGM) C-terminus Fib_alpha PF08702.10 NODE_63600_length_254_cov_41.401826_g55659_i0reverse_frame_2 - 0.13 12.5 4.4 0.43 10.7 2.6 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Sin3a_C PF16879.5 NODE_63599_length_254_cov_44.506849_g55658_i0reverse_frame_2 - 0.16 11.7 2.3 0.23 11.1 2.3 1.2 1 0 0 1 1 1 0 C-terminal domain of Sin3a protein Sex_peptide PF08138.11 NODE_63598_length_254_cov_47.570776_g55657_i0reverse_frame_3 - 0.13 12.5 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Sex peptide (SP) family Cyclin_C PF02984.19 NODE_63592_length_254_cov_51.689498_g55651_i0reverse_frame_3 - 0.11 12.6 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Cyclin, C-terminal domain TMEM247 PF15444.6 NODE_63592_length_254_cov_51.689498_g55651_i0forward_frame_3 - 0.73 9.8 6.8 1.1 9.3 6.8 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 DHHC PF01529.20 NODE_63586_length_254_cov_58.945205_g55645_i0reverse_frame_2 - 8.2 6.5 16.1 9.4 6.3 16.1 1.0 1 0 0 1 1 1 0 DHHC palmitoyltransferase UPF0254 PF06787.11 NODE_63586_length_254_cov_58.945205_g55645_i0forward_frame_2 - 0.091 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) DUF4734 PF15881.5 NODE_63585_length_254_cov_58.949772_g55644_i0reverse_frame_3 - 0.052 13.7 0.6 0.092 12.9 0.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4734) TMEM187 PF15100.6 NODE_63585_length_254_cov_58.949772_g55644_i0reverse_frame_2 - 0.11 12.1 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 TMEM187 protein family RSN1_TM PF13967.6 NODE_63578_length_254_cov_65.004566_g55637_i0reverse_frame_3 - 0.083 12.6 0.1 0.098 12.4 0.1 1.0 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport Peptidase_S68 PF10461.9 NODE_63575_length_254_cov_66.246575_g55634_i0reverse_frame_3 - 1.8 8.8 0.1 1.8 8.8 0.1 2.3 2 0 0 2 2 2 0 Peptidase S68 R2K_3 PF14243.6 NODE_63571_length_254_cov_72.789954_g55630_i0reverse_frame_2 - 0.16 11.9 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 BssB_TutG PF18512.1 NODE_63571_length_254_cov_72.789954_g55630_i0forward_frame_3 - 0.044 13.7 1.5 1.4 8.8 0.1 2.4 1 1 1 2 2 2 0 Benzylsuccinate synthase beta subunit AAA_lid_2 PF17863.1 NODE_63571_length_254_cov_72.789954_g55630_i0forward_frame_3 - 0.066 13.1 0.2 0.085 12.7 0.2 1.2 1 0 0 1 1 1 0 AAA lid domain FNIP_C PF14638.6 NODE_63570_length_254_cov_76.470320_g55629_i0reverse_frame_3 - 0.049 13.3 0.1 0.063 12.9 0.1 1.1 1 0 0 1 1 1 0 Folliculin-interacting protein C-terminus DUF5448 PF17526.2 NODE_63570_length_254_cov_76.470320_g55629_i0reverse_frame_3 - 0.097 12.9 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5448) EGF_CA PF07645.15 NODE_63570_length_254_cov_76.470320_g55629_i0forward_frame_2 - 2 8.7 14.8 5.1 7.4 14.8 1.8 1 1 0 1 1 1 0 Calcium-binding EGF domain TFB6 PF17110.5 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 0.18 11.5 7.1 0.22 11.3 7.1 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF4574 PF15141.6 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 3.4 7.7 8.8 0.48 10.4 4.7 1.7 1 1 1 2 2 2 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Presenilin PF01080.17 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 4.5 5.9 6.4 4.4 6.0 6.4 1.0 1 0 0 1 1 1 0 Presenilin FAM176 PF14851.6 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 4.5 6.9 9.9 5.5 6.7 9.9 1.2 1 0 0 1 1 1 0 FAM176 family Connexin PF00029.19 NODE_63566_length_254_cov_91.433790_g55625_i0reverse_frame_2 - 6.8 6.4 7.9 7.2 6.3 7.9 1.2 1 0 0 1 1 1 0 Connexin Papo_T_antigen PF02380.15 NODE_63563_length_254_cov_102.333333_g55622_i0reverse_frame_2 - 0.071 13.2 0.3 0.11 12.7 0.3 1.4 1 0 0 1 1 1 0 T-antigen specific domain BA14K PF07886.11 NODE_63563_length_254_cov_102.333333_g55622_i0forward_frame_2 - 0.016 15.0 0.3 0.03 14.2 0.3 1.4 1 0 0 1 1 1 0 BA14K-like protein ADD_DNMT3 PF17980.1 NODE_63562_length_254_cov_105.287671_g55621_i0forward_frame_2 - 0.035 14.1 0.8 0.055 13.5 0.1 1.6 2 0 0 2 2 2 0 Cysteine rich ADD domain in DNMT3 Focadhesin PF11229.8 NODE_63560_length_254_cov_116.050228_g55619_i0reverse_frame_2 - 0.24 9.6 0.0 0.24 9.6 0.0 1.0 1 0 0 1 1 1 0 Focadhesin KASH PF10541.9 NODE_63559_length_254_cov_126.840183_g55618_i0reverse_frame_2 - 0.069 13.4 0.3 0.14 12.4 0.1 1.6 2 0 0 2 2 2 0 Nuclear envelope localisation domain Nodulin_late PF07127.11 NODE_63557_length_254_cov_130.337900_g55616_i0forward_frame_3 - 0.026 14.9 0.3 0.036 14.4 0.3 1.4 1 1 0 1 1 1 0 Late nodulin protein Ly49 PF08391.10 NODE_63555_length_254_cov_143.780822_g55614_i0forward_frame_2 - 0.034 14.5 0.2 0.043 14.2 0.2 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region DUF3915 PF13054.6 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_2 - 5.7 6.9 11.2 4.7 7.2 10.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_63554_length_254_cov_154.579909_g55613_i0reverse_frame_2 - 7.6 4.7 13.9 7.6 4.7 13.9 1.0 1 0 0 1 1 1 0 Atrophin-1 family VEGFR-2_TMD PF17988.1 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_3 - 0.14 11.6 8.9 0.27 10.7 8.9 1.5 1 0 0 1 1 1 0 VEGFR-2 Transmembrane domain DUF1761 PF08570.10 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_3 - 0.39 11.0 8.8 0.57 10.5 8.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1761) DUF2905 PF11146.8 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_3 - 1.2 9.3 20.4 0.075 13.2 7.3 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2905) DUF2070 PF09843.9 NODE_63554_length_254_cov_154.579909_g55613_i0forward_frame_3 - 1.9 6.7 16.7 2.3 6.4 16.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PIF2 PF04631.12 NODE_63553_length_254_cov_155.424658_g55612_i0reverse_frame_2 - 0.19 10.5 0.0 0.23 10.3 0.0 1.1 1 0 0 1 1 1 0 Per os infectivity factor 2 Copper-fist PF00649.18 NODE_63552_length_254_cov_194.397260_g55611_i0reverse_frame_2 - 0.058 12.9 2.2 0.091 12.3 2.2 1.3 1 0 0 1 1 1 0 Copper fist DNA binding domain LysE PF01810.18 NODE_63552_length_254_cov_194.397260_g55611_i0forward_frame_2 - 0.14 11.6 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 LysE type translocator # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks319.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks319.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks319.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks319.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Mid2 PF04478.12 ORF36420 - 0.18 11.7 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor Acyl_transf_3 PF01757.22 ORF35050 - 9.5e-16 57.8 15.7 1.4e-15 57.2 15.7 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF2162 PF09930.9 ORF35050 - 0.047 13.1 0.7 0.11 11.9 0.7 1.6 1 0 0 1 1 1 0 Predicted transporter (DUF2162) PhoLip_ATPase_C PF16212.5 ORF31025 - 2.5e-70 237.1 30.8 2.9e-70 236.9 30.8 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase_3 PF08282.12 ORF31025 - 0.015 15.1 0.1 0.015 15.1 0.1 2.3 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase DSPc PF00782.20 ORF31025 - 0.089 12.6 0.2 0.24 11.2 0.2 1.7 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain CDC45 PF02724.14 ORF31025 - 1.4 7.1 21.0 1.8 6.7 21.0 1.1 1 0 0 1 1 1 0 CDC45-like protein Hydrolase PF00702.26 ORF31025 - 3.1 8.0 4.8 0.59 10.4 0.1 2.1 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase TRP PF06011.12 ORF2814 - 0.0039 16.0 7.1 0.0039 16.0 7.1 2.2 2 0 0 2 2 2 1 Transient receptor potential (TRP) ion channel Bromo_MP PF01573.16 ORF2814 - 0.086 12.2 0.3 0.14 11.5 0.3 1.2 1 0 0 1 1 1 0 Bromovirus movement protein cNMP_binding PF00027.29 ORF19462 - 0.0002 21.4 0.0 0.00032 20.7 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain RecG_N PF17190.4 ORF19462 - 0.04 14.6 11.2 3.1 8.6 0.5 4.2 2 1 1 3 3 3 0 RecG N-terminal helical domain DNA_methylase PF00145.17 ORF16628 - 0.00068 19.1 0.0 0.0009 18.7 0.0 1.3 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase RNase_H_2 PF13482.6 ORF143318 - 6.9e-18 65.2 0.0 1.1e-17 64.6 0.0 1.3 1 0 0 1 1 1 1 RNase_H superfamily LRR_6 PF13516.6 ORF138925 - 1.3e-22 77.9 10.2 0.0027 17.6 0.2 6.8 7 0 0 7 7 7 6 Leucine Rich repeat LRR_4 PF12799.7 ORF138925 - 3.8e-14 52.6 2.6 0.00048 20.5 0.0 4.7 2 2 1 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF138925 - 4.7e-12 45.5 2.6 2.9e-06 27.0 0.0 4.6 2 1 2 4 4 4 2 Leucine rich repeat LRR_1 PF00560.33 ORF138925 - 0.0014 18.9 5.3 2.5 9.0 0.0 6.2 7 1 0 7 7 7 1 Leucine Rich Repeat HECT PF00632.25 ORF138320 - 1.9e-40 139.3 0.0 2.3e-40 139.0 0.0 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Acyl_transf_3 PF01757.22 ORF135260 - 9.5e-16 57.8 15.7 1.4e-15 57.2 15.7 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF2162 PF09930.9 ORF135260 - 0.047 13.1 0.7 0.11 11.9 0.7 1.6 1 0 0 1 1 1 0 Predicted transporter (DUF2162) PUB PF09409.10 ORF134930 - 4.9e-17 61.6 0.0 9.3e-17 60.7 0.0 1.4 1 0 0 1 1 1 1 PUB domain DNA_ligase_A_M PF01068.21 ORF134930 - 0.013 15.2 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 ATP dependent DNA ligase domain Acyl_transf_3 PF01757.22 ORF121641 - 9.5e-16 57.8 15.7 1.4e-15 57.2 15.7 1.2 1 0 0 1 1 1 1 Acyltransferase family DUF2162 PF09930.9 ORF121641 - 0.047 13.1 0.7 0.11 11.9 0.7 1.6 1 0 0 1 1 1 0 Predicted transporter (DUF2162) PIP5K PF01504.18 ORF121366 - 9.7e-83 277.5 11.4 9.7e-83 277.5 11.4 1.5 2 0 0 2 2 2 1 Phosphatidylinositol-4-phosphate 5-Kinase DUF520 PF04461.13 ORF121366 - 0.011 15.9 0.4 0.027 14.6 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF520) DUF3450 PF11932.8 ORF119610 - 0.01 15.2 13.3 0.074 12.3 2.9 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3450) DNase-RNase PF02577.14 ORF119610 - 0.042 13.5 0.0 0.075 12.7 0.0 1.4 1 0 0 1 1 1 0 Bifunctional nuclease TMF_DNA_bd PF12329.8 ORF119610 - 0.051 13.6 0.6 0.051 13.6 0.6 3.9 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Prefoldin_2 PF01920.20 ORF119610 - 0.077 13.0 22.7 1.3 9.0 1.1 3.5 3 0 0 3 3 3 0 Prefoldin subunit OmpH PF03938.14 ORF119610 - 0.1 12.9 16.3 0.46 10.8 9.3 2.4 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF119610 - 0.24 10.7 6.6 0.37 10.1 3.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) FliJ PF02050.16 ORF119610 - 0.28 11.4 12.8 7.8 6.7 9.1 2.6 2 1 0 2 2 2 0 Flagellar FliJ protein T3SSipB PF16535.5 ORF119610 - 0.36 11.3 4.3 0.18 12.3 0.8 2.0 2 0 0 2 2 2 0 Type III cell invasion protein SipB DivIC PF04977.15 ORF119610 - 0.52 10.1 0.1 0.52 10.1 0.1 3.6 2 1 1 3 3 3 0 Septum formation initiator TMPIT PF07851.13 ORF119610 - 0.6 9.3 12.8 0.14 11.4 7.8 2.1 2 0 0 2 2 2 0 TMPIT-like protein DUF2203 PF09969.9 ORF119610 - 0.98 10.2 8.0 2 9.1 3.8 2.6 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF119610 - 1.8 7.6 14.5 0.17 11.0 9.6 1.7 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_MT_bd PF06657.13 ORF119610 - 3 8.3 13.5 0.27 11.7 2.3 3.5 3 1 1 4 4 3 0 Centrosome microtubule-binding domain of Cep57 Syntaxin-6_N PF09177.11 ORF119610 - 5.7 7.6 13.4 1.2 9.8 6.4 2.9 2 1 0 2 2 2 0 Syntaxin 6, N-terminal ATG16 PF08614.11 ORF119610 - 7.4 6.7 21.5 2.2 8.5 8.3 3.1 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) 2OG-FeII_Oxy_3 PF13640.6 ORF118198 - 5.8e-18 65.6 0.0 1.8e-17 64.0 0.0 1.9 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Mid2 PF04478.12 ORF11769 - 0.18 11.7 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor Phage_integrase PF00589.22 ORF116225 - 0.028 14.2 0.0 0.31 10.8 0.0 2.2 1 1 0 1 1 1 0 Phage integrase family Abhydro_lipase PF04083.16 ORF102904 - 6.2e-20 70.5 0.0 1.3e-19 69.5 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF102904 - 7.4e-18 65.1 0.6 4.4e-17 62.6 0.6 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold FSH1 PF03959.13 ORF102904 - 0.003 17.2 0.1 0.12 12.0 0.0 2.2 2 0 0 2 2 2 1 Serine hydrolase (FSH1) Hydrolase_4 PF12146.8 ORF102904 - 0.0064 15.8 0.0 0.074 12.3 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 DUF900 PF05990.12 ORF102904 - 0.024 14.1 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) NOP5NT PF08156.13 ORF102904 - 0.054 13.9 0.1 0.17 12.3 0.1 1.8 1 0 0 1 1 1 0 NOP5NT (NUC127) domain TusA PF01206.17 ORF102904 - 0.058 13.2 0.0 6.3 6.7 0.0 2.7 3 0 0 3 3 3 0 Sulfurtransferase TusA ThiF PF00899.21 ORF101401 - 4.7e-65 219.4 0.0 8.3e-65 218.5 0.0 1.3 1 0 0 1 1 1 1 ThiF family E2_bind PF08825.10 ORF101401 - 4.1e-09 36.5 0.6 7.5e-09 35.6 0.6 1.5 1 0 0 1 1 1 1 E2 binding domain Shikimate_DH PF01488.20 ORF101401 - 0.00041 20.4 0.1 0.0015 18.6 0.0 2.0 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF101401 - 0.013 15.8 0.2 0.17 12.1 0.0 2.4 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 ORF101401 - 0.074 13.5 0.0 0.19 12.2 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding TrkA_N PF02254.18 ORF101401 - 0.093 13.0 0.1 0.19 12.0 0.1 1.5 1 0 0 1 1 1 0 TrkA-N domain Ecm33 PF12454.8 ORF101401 - 0.1 12.8 0.6 0.19 11.9 0.6 1.4 1 0 0 1 1 1 0 GPI-anchored cell wall organization protein DAO PF01266.24 ORF101401 - 0.15 11.6 0.1 0.27 10.8 0.1 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase Abhydro_lipase PF04083.16 ORF101097 - 6.2e-20 70.5 0.0 1.3e-19 69.5 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF101097 - 7.4e-18 65.1 0.6 4.4e-17 62.6 0.6 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold FSH1 PF03959.13 ORF101097 - 0.003 17.2 0.1 0.12 12.0 0.0 2.2 2 0 0 2 2 2 1 Serine hydrolase (FSH1) Hydrolase_4 PF12146.8 ORF101097 - 0.0064 15.8 0.0 0.074 12.3 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 DUF900 PF05990.12 ORF101097 - 0.024 14.1 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) NOP5NT PF08156.13 ORF101097 - 0.054 13.9 0.1 0.17 12.3 0.1 1.8 1 0 0 1 1 1 0 NOP5NT (NUC127) domain TusA PF01206.17 ORF101097 - 0.058 13.2 0.0 6.3 6.7 0.0 2.7 3 0 0 3 3 3 0 Sulfurtransferase TusA DUF229 PF02995.17 ORF98860 - 1.4e-26 93.2 8.2 7.9e-17 61.0 0.2 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF98860 - 3.5e-07 29.9 3.9 1.6e-06 27.7 3.3 2.2 1 1 0 1 1 1 1 Sulfatase Mucin PF01456.17 ORF98819 - 1.1 9.2 24.0 0.14 12.1 14.6 2.4 2 0 0 2 2 2 0 Mucin-like glycoprotein DUF3439 PF11921.8 ORF98819 - 1.7 8.6 21.0 1.2 9.2 14.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) Tir_receptor_C PF07489.11 ORF98819 - 2.1 8.3 15.5 0.15 12.0 8.6 2.1 2 0 0 2 2 2 0 Translocated intimin receptor (Tir) C-terminus DUF2063 PF09836.9 ORF85985 - 0.011 16.0 0.4 0.13 12.5 0.2 2.5 2 0 0 2 2 2 0 Putative DNA-binding domain PP1_inhibitor PF05361.12 ORF85985 - 0.07 13.1 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 PKC-activated protein phosphatase-1 inhibitor AAA PF00004.29 ORF8595 - 8.8e-41 139.4 0.0 2.1e-40 138.2 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 ORF8595 - 2.9e-17 62.4 0.1 5.2e-17 61.6 0.1 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 ORF8595 - 2.3e-12 46.5 1.4 3.1e-12 46.1 0.2 2.0 2 0 0 2 2 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF8595 - 6.5e-05 23.4 0.2 0.0074 16.7 0.0 2.5 1 1 0 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 ORF8595 - 8.3e-05 22.6 1.2 0.00031 20.7 0.1 2.5 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF8595 - 0.00033 21.0 1.2 0.043 14.1 0.0 2.9 2 1 1 3 3 2 1 AAA domain AAA_2 PF07724.14 ORF8595 - 0.00057 20.1 0.4 0.0025 18.0 0.0 2.2 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 ORF8595 - 0.00077 19.6 0.0 0.0023 18.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain Retrotran_gag_2 PF14223.6 ORF8595 - 0.002 17.8 1.6 0.24 11.1 1.0 2.4 2 0 0 2 2 2 1 gag-polypeptide of LTR copia-type Mg_chelatase PF01078.21 ORF8595 - 0.0069 15.8 0.0 0.017 14.5 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Laminin_II PF06009.12 ORF8595 - 0.011 15.7 3.2 0.029 14.4 3.2 1.7 1 0 0 1 1 1 0 Laminin Domain II DUF4600 PF15372.6 ORF8595 - 0.015 15.7 1.4 0.035 14.5 1.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4600) AAA_11 PF13086.6 ORF8595 - 0.017 14.9 2.0 0.23 11.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain RuvB_N PF05496.12 ORF8595 - 0.021 14.6 0.0 0.062 13.0 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 ORF8595 - 0.028 13.6 0.4 0.1 11.8 0.0 2.0 2 0 0 2 2 2 0 TIP49 P-loop domain CPT PF07931.12 ORF8595 - 0.039 13.8 0.0 0.089 12.6 0.0 1.6 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF8595 - 0.046 13.2 0.0 0.099 12.1 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein IstB_IS21 PF01695.17 ORF8595 - 0.052 13.3 0.1 0.12 12.0 0.1 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF812 PF05667.11 ORF8595 - 0.12 11.2 5.7 0.17 10.7 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) YabA PF06156.13 ORF8595 - 2.7 8.7 5.9 4.5 8.0 3.6 2.3 2 0 0 2 2 2 0 Initiation control protein YabA DUF3748 PF12566.8 ORF84251 - 8.7e-57 190.4 4.7 1.5e-55 186.4 1.0 3.5 4 0 0 4 4 4 1 Protein of unknown function (DUF3748) PD40 PF07676.12 ORF84251 - 4.4e-05 23.3 1.9 0.1 12.5 0.1 4.1 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 ORF84251 - 8.2e-05 21.5 0.1 0.69 8.6 0.0 4.0 3 2 1 5 5 5 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region Proteasome_A_N PF10584.9 ORF84251 - 0.11 12.2 0.9 26 4.6 0.0 3.3 3 0 0 3 3 3 0 Proteasome subunit A N-terminal signature WD40 PF00400.32 ORF84251 - 0.4 11.6 4.7 49 5.0 0.1 4.0 3 1 1 4 4 4 0 WD domain, G-beta repeat tRNA-synt_2d PF01409.20 ORF84138 - 4.7e-83 278.4 0.0 6.3e-83 278.0 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) PheRS_DBD3 PF18553.1 ORF84138 - 1.8e-15 56.9 0.3 1.4e-14 54.1 0.0 2.5 2 0 0 2 2 2 1 PheRS DNA binding domain 3 tRNA_synthFbeta PF17759.1 ORF84138 - 3.9e-06 26.4 0.0 0.039 13.4 0.0 2.2 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 ORF84138 - 7.1e-06 25.3 0.6 0.00095 18.3 0.1 2.7 3 0 0 3 3 3 2 tRNA synthetases class II (D, K and N) DUF3474 PF11960.8 ORF77606 - 1.5 9.0 5.1 2.7 8.2 0.5 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3474) PMC2NT PF08066.12 ORF77606 - 3.7 8.3 7.9 0.33 11.7 1.0 2.8 3 0 0 3 3 3 0 PMC2NT (NUC016) domain DUF3474 PF11960.8 ORF74495 - 1.4 9.1 5.1 2.7 8.2 0.5 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3474) PMC2NT PF08066.12 ORF74495 - 4.9 7.9 8.3 0.33 11.7 1.0 2.8 3 0 0 3 3 3 0 PMC2NT (NUC016) domain VWA_3 PF13768.6 ORF73 - 1.4e-26 93.3 0.0 1.9e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF73 - 4.1e-20 72.8 0.7 8.4e-20 71.7 0.2 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF73 - 3.6e-14 53.3 0.0 1.5e-13 51.3 0.0 2.1 2 1 0 2 2 2 1 von Willebrand factor type A domain Pyr_redox_2 PF07992.14 ORF7072 - 2.9e-05 23.4 0.0 0.00053 19.3 0.0 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF7072 - 0.008 16.7 0.2 0.12 12.9 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DUF647 PF04884.14 ORF7072 - 0.22 11.1 0.0 0.33 10.5 0.0 1.2 1 0 0 1 1 1 0 Vitamin B6 photo-protection and homoeostasis FecCD PF01032.18 ORF6574 - 4.9e-90 301.7 33.6 6.4e-90 301.3 33.6 1.0 1 0 0 1 1 1 1 FecCD transport family DUF3474 PF11960.8 ORF59846 - 2.9 8.1 4.8 2.7 8.2 0.5 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3474) PMC2NT PF08066.12 ORF59846 - 7.8 7.3 9.1 0.33 11.7 1.0 2.8 3 0 0 3 3 3 0 PMC2NT (NUC016) domain VWA_3 PF13768.6 ORF58201 - 1.4e-26 93.3 0.0 1.9e-26 92.8 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF58201 - 4.1e-20 72.8 0.7 8.4e-20 71.7 0.2 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF58201 - 3.6e-14 53.3 0.0 1.5e-13 51.3 0.0 2.1 2 1 0 2 2 2 1 von Willebrand factor type A domain Pertactin PF03212.14 ORF56283 - 4.8e-45 152.4 4.8 4.9e-45 152.4 3.0 2.0 2 0 0 2 2 2 1 Pertactin Autotransporter PF03797.19 ORF56283 - 1.1e-42 146.5 22.3 1.1e-42 146.5 22.3 1.9 2 0 0 2 2 2 1 Autotransporter beta-domain Adap_comp_sub PF00928.21 ORF55439 - 4.2e-89 298.4 0.2 6.3e-89 297.8 0.2 1.3 1 0 0 1 1 1 1 Adaptor complexes medium subunit family muHD PF10291.9 ORF55439 - 0.0021 17.6 0.1 0.0055 16.2 0.0 1.7 2 0 0 2 2 2 1 Muniscin C-terminal mu homology domain tRNA-synt_2b PF00587.25 ORF52124 - 6.6e-36 124.0 0.0 9.6e-36 123.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 ORF52124 - 2e-34 118.0 3.5 3.3e-34 117.4 3.5 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Filament PF00038.21 ORF52124 - 0.0036 16.9 0.6 0.0061 16.2 0.6 1.3 1 0 0 1 1 1 1 Intermediate filament protein CENP-F_leu_zip PF10473.9 ORF52124 - 0.034 14.2 1.0 0.42 10.6 0.7 2.4 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.11 ORF52124 - 0.092 11.6 2.0 0.14 11.0 2.0 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Cep57_CLD_2 PF14197.6 ORF52124 - 0.17 12.0 5.4 0.61 10.2 5.4 1.9 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 APG6_N PF17675.1 ORF52124 - 0.3 11.6 3.6 0.75 10.3 3.6 1.6 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF4164 PF13747.6 ORF52124 - 0.37 11.1 4.4 0.89 9.9 4.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) TT_ORF2 PF02957.15 ORF48496 - 0.22 12.4 3.3 0.39 11.6 3.3 1.3 1 0 0 1 1 1 0 TT viral ORF2 DUF3439 PF11921.8 ORF48496 - 4.8 7.2 17.7 1.9 8.5 9.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) AAA PF00004.29 ORF48279 - 8.8e-41 139.4 0.0 2.1e-40 138.2 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 ORF48279 - 2.9e-17 62.4 0.1 5.2e-17 61.6 0.1 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 ORF48279 - 2.3e-12 46.5 1.4 3.1e-12 46.1 0.2 2.0 2 0 0 2 2 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF48279 - 6.5e-05 23.4 0.2 0.0074 16.7 0.0 2.5 1 1 0 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 ORF48279 - 8.3e-05 22.6 1.2 0.00031 20.7 0.1 2.5 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF48279 - 0.00033 21.0 1.2 0.043 14.1 0.0 2.9 2 1 1 3 3 2 1 AAA domain AAA_2 PF07724.14 ORF48279 - 0.00057 20.1 0.4 0.0025 18.0 0.0 2.2 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 ORF48279 - 0.00077 19.6 0.0 0.0023 18.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain Retrotran_gag_2 PF14223.6 ORF48279 - 0.002 17.8 1.6 0.24 11.1 1.0 2.4 2 0 0 2 2 2 1 gag-polypeptide of LTR copia-type Mg_chelatase PF01078.21 ORF48279 - 0.0069 15.8 0.0 0.017 14.5 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Laminin_II PF06009.12 ORF48279 - 0.011 15.7 3.2 0.029 14.4 3.2 1.7 1 0 0 1 1 1 0 Laminin Domain II DUF4600 PF15372.6 ORF48279 - 0.015 15.7 1.4 0.035 14.5 1.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4600) AAA_11 PF13086.6 ORF48279 - 0.017 14.9 2.0 0.23 11.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain RuvB_N PF05496.12 ORF48279 - 0.021 14.6 0.0 0.062 13.0 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 ORF48279 - 0.028 13.6 0.4 0.1 11.8 0.0 2.0 2 0 0 2 2 2 0 TIP49 P-loop domain CPT PF07931.12 ORF48279 - 0.039 13.8 0.0 0.089 12.6 0.0 1.6 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF48279 - 0.046 13.2 0.0 0.099 12.1 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein IstB_IS21 PF01695.17 ORF48279 - 0.052 13.3 0.1 0.12 12.0 0.1 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF812 PF05667.11 ORF48279 - 0.12 11.2 5.7 0.17 10.7 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) YabA PF06156.13 ORF48279 - 2.7 8.7 5.9 4.5 8.0 3.6 2.3 2 0 0 2 2 2 0 Initiation control protein YabA Adap_comp_sub PF00928.21 ORF4648 - 3.1e-87 292.3 0.6 3.9e-87 292.0 0.6 1.1 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 ORF4648 - 0.00052 20.0 1.1 0.0011 18.9 1.1 1.6 1 0 0 1 1 1 1 Clathrin adaptor complex small chain muHD PF10291.9 ORF4648 - 0.023 14.2 0.0 0.044 13.2 0.0 1.4 1 0 0 1 1 1 0 Muniscin C-terminal mu homology domain Thiolase_N PF00108.23 ORF46423 - 9.7e-20 71.0 0.0 1.1e-18 67.6 0.0 2.4 2 1 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF46423 - 2e-12 46.8 0.1 3.1e-11 43.0 0.0 2.8 1 1 2 3 3 3 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF46423 - 0.03 13.9 0.2 0.4 10.2 0.3 2.4 2 1 0 2 2 2 0 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 ORF46423 - 0.091 12.6 0.5 0.66 9.9 0.2 2.4 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Urb2 PF10441.9 ORF42687 - 0.07 13.1 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Urb2/Npa2 family DUF2175 PF09943.9 ORF42687 - 0.57 10.5 2.4 0.79 10.0 0.4 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) OTU PF02338.19 ORF30357 - 0.078 13.5 0.8 0.2 12.1 0.0 2.1 2 1 0 2 2 2 0 OTU-like cysteine protease Peptidase_S10 PF00450.22 ORF22301 - 2.3e-105 353.4 3.6 2.7e-105 353.2 3.6 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase DUF229 PF02995.17 ORF21676 - 1.4e-26 93.2 8.2 7.9e-17 61.0 0.2 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF21676 - 3.5e-07 29.9 3.9 1.6e-06 27.7 3.3 2.2 1 1 0 1 1 1 1 Sulfatase YrzO PF14142.6 ORF20223 - 0.024 14.5 0.2 0.06 13.2 0.2 1.7 1 0 0 1 1 1 0 YrzO-like protein Atrophin-1 PF03154.15 ORF17200 - 0.21 9.9 9.7 0.28 9.4 9.7 1.1 1 0 0 1 1 1 0 Atrophin-1 family CDC45 PF02724.14 ORF17200 - 0.25 9.6 2.6 0.31 9.3 2.6 1.1 1 0 0 1 1 1 0 CDC45-like protein Ank_2 PF12796.7 ORF152345 - 4.2e-17 62.5 0.2 0.0001 22.8 0.0 4.1 1 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF152345 - 1e-12 48.0 5.1 0.043 14.2 0.7 5.0 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF152345 - 1.2e-10 40.6 1.0 0.0013 19.0 0.0 6.0 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF152345 - 5.1e-09 36.2 3.9 0.00053 20.3 0.0 4.7 4 1 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF152345 - 1.9e-07 31.5 0.2 0.00018 22.0 0.1 4.7 3 1 2 5 5 5 3 Ankyrin repeats (many copies) Mucin PF01456.17 ORF14641 - 1.1 9.2 24.0 0.14 12.1 14.6 2.4 2 0 0 2 2 2 0 Mucin-like glycoprotein DUF3439 PF11921.8 ORF14641 - 1.7 8.6 21.0 1.2 9.2 14.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) Tir_receptor_C PF07489.11 ORF14641 - 2.1 8.3 15.5 0.15 12.0 8.6 2.1 2 0 0 2 2 2 0 Translocated intimin receptor (Tir) C-terminus RCC1_2 PF13540.6 ORF143576 - 6.5e-20 70.4 27.2 0.00045 19.9 0.1 9.0 9 0 0 9 9 9 8 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF143576 - 0.016 15.1 3.0 17 5.4 0.0 4.4 2 1 1 4 4 4 0 Lipocalin / cytosolic fatty-acid binding protein family TT_ORF2 PF02957.15 ORF140814 - 0.26 12.2 3.5 0.47 11.4 3.5 1.3 1 0 0 1 1 1 0 TT viral ORF2 DUF3439 PF11921.8 ORF140814 - 5 7.1 17.7 1.9 8.5 9.6 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) Mucin PF01456.17 ORF140814 - 6.6 6.7 21.4 1.3 9.0 11.1 2.4 2 0 0 2 2 2 0 Mucin-like glycoprotein Atrophin-1 PF03154.15 ORF139492 - 0.21 9.9 9.7 0.28 9.4 9.7 1.1 1 0 0 1 1 1 0 Atrophin-1 family CDC45 PF02724.14 ORF139492 - 0.25 9.6 2.6 0.31 9.3 2.6 1.1 1 0 0 1 1 1 0 CDC45-like protein B56 PF01603.20 ORF130401 - 1.1e-102 344.1 19.0 1.4e-102 343.8 19.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) FPL PF09758.9 ORF130401 - 0.084 12.9 7.8 0.27 11.2 3.2 2.5 2 0 0 2 2 2 0 Uncharacterised conserved protein BBS1 PF14779.6 ORF74014 - 1.2e-73 247.7 2.6 3.2e-73 246.3 0.8 1.9 2 0 0 2 2 2 1 Ciliary BBSome complex subunit 1 BBS2_Mid PF14783.6 ORF74014 - 4.1e-08 33.2 2.2 0.01 15.9 0.1 3.7 2 1 1 3 3 3 3 Ciliary BBSome complex subunit 2, middle region PHTB1_N PF14727.6 ORF74014 - 8.4e-06 25.4 0.4 0.18 11.1 0.1 2.8 2 1 1 3 3 3 2 PTHB1 N-terminus Peptidase_S10 PF00450.22 ORF59830 - 1.6e-117 393.5 0.3 2.1e-117 393.1 0.3 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase Acyl-CoA_dh_1 PF00441.24 ORF36517 - 8.9e-34 116.9 1.5 1.4e-33 116.2 1.5 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF36517 - 1.9e-18 66.5 0.3 3.6e-18 65.5 0.3 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 ORF36517 - 2.1e-10 41.2 1.0 1.3e-09 38.7 0.0 2.8 3 1 0 3 3 3 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF36517 - 6e-05 23.3 0.1 0.0001 22.6 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain FATC PF02260.20 ORF36517 - 0.15 11.9 0.0 0.41 10.5 0.0 1.7 2 0 0 2 2 2 0 FATC domain EF-hand_1 PF00036.32 ORF34785 - 2e-14 51.9 7.7 1.8e-05 24.0 0.0 4.0 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF34785 - 2.9e-13 49.4 5.4 1e-08 34.9 2.7 4.0 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_7 PF13499.6 ORF34785 - 4.5e-12 46.2 10.8 3.7e-09 36.9 4.1 4.0 3 1 1 4 4 4 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF34785 - 5.8e-12 44.5 7.5 7.5e-05 22.4 0.1 4.4 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF34785 - 5.3e-07 28.9 9.6 0.0009 18.6 0.1 4.2 5 0 0 5 5 5 2 EF hand EF-hand_11 PF08976.11 ORF34785 - 1.1e-05 26.2 1.5 0.00059 20.7 0.0 2.8 2 0 0 2 2 2 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF34785 - 0.015 15.6 1.0 0.015 15.6 1.0 2.7 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 ORF34785 - 3 7.8 7.7 0.35 10.8 2.1 2.4 3 0 0 3 3 3 0 EF hand EF-hand_14 PF17959.1 ORF34785 - 6.4 7.2 7.6 0.47 10.8 0.1 3.0 3 1 1 4 4 4 0 EF-hand domain TSP_1 PF00090.19 ORF33490 - 0.0019 18.4 21.2 0.0061 16.8 7.8 3.6 3 0 0 3 3 3 2 Thrombospondin type 1 domain LamB PF02264.15 ORF32218 - 1e-84 285.7 20.7 1.1e-84 285.5 20.7 1.0 1 0 0 1 1 1 1 LamB porin Pinin_SDK_memA PF04696.13 ORF29079 - 0.008 16.2 0.4 0.008 16.2 0.4 2.4 2 0 0 2 2 2 1 pinin/SDK/memA/ protein conserved region CS PF04969.16 ORF29079 - 0.028 15.4 0.0 0.059 14.4 0.0 1.6 1 0 0 1 1 1 0 CS domain Rb_C PF08934.10 ORF29079 - 0.12 12.2 0.0 0.3 10.9 0.0 1.6 1 0 0 1 1 1 0 Rb C-terminal domain K_oxygenase PF13434.6 ORF27522 - 1.1e-12 47.8 0.0 3.3e-09 36.3 0.0 2.1 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) FMO-like PF00743.19 ORF27522 - 4.2e-09 35.4 0.0 6.7e-09 34.7 0.0 1.3 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_2 PF07992.14 ORF27522 - 1.1e-05 24.9 0.2 0.028 13.7 0.0 2.6 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF27522 - 0.00022 20.6 0.0 0.0078 15.5 0.0 2.3 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF27522 - 0.0006 20.3 0.0 0.027 15.0 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase WD40 PF00400.32 ORF26523 - 5.8e-19 68.1 16.4 0.017 15.9 0.1 8.1 8 0 0 8 8 8 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF26523 - 5.8e-12 45.8 0.0 0.00069 19.9 0.1 4.8 2 1 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF26523 - 2e-05 24.1 0.2 1.2 8.4 0.0 3.8 2 2 2 4 4 4 2 WD40-like domain Cytochrom_D1 PF02239.16 ORF26523 - 0.0097 14.5 0.9 0.17 10.4 0.0 3.0 2 1 1 3 3 3 1 Cytochrome D1 heme domain Coatomer_WDAD PF04053.14 ORF26523 - 0.01 14.9 0.0 0.031 13.3 0.0 1.8 1 1 0 1 1 1 0 Coatomer WD associated region RAB3GAP2_N PF14655.6 ORF26523 - 0.12 11.6 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit N-terminus DUF3961 PF13106.6 ORF24734 - 0.065 12.9 0.1 0.065 12.9 0.1 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3961) ELK PF03789.13 ORF24734 - 0.081 13.0 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 ELK domain Comm PF15957.5 ORF24734 - 5.6 7.4 5.1 4.9 7.5 0.7 2.6 2 0 0 2 2 2 0 Commissureless Prefoldin_2 PF01920.20 ORF23394 - 0.003 17.5 2.3 0.003 17.5 2.3 4.3 3 2 3 6 6 6 1 Prefoldin subunit Fez1 PF06818.15 ORF23394 - 0.016 15.6 17.6 0.02 15.4 7.3 2.4 2 0 0 2 2 2 0 Fez1 Spc7 PF08317.11 ORF23394 - 0.085 11.7 28.0 0.1 11.5 9.9 2.6 1 1 0 2 2 2 0 Spc7 kinetochore protein COG2 PF06148.11 ORF23394 - 0.17 12.0 15.0 0.085 12.9 1.3 3.6 3 1 0 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 Golgin_A5 PF09787.9 ORF23394 - 0.5 9.8 22.1 0.73 9.2 11.1 2.3 2 0 0 2 2 2 0 Golgin subfamily A member 5 ApoLp-III PF07464.11 ORF23394 - 0.53 10.4 18.1 0.042 13.9 5.8 3.1 3 1 0 3 3 2 0 Apolipophorin-III precursor (apoLp-III) CorA PF01544.18 ORF23394 - 0.66 9.2 5.7 1.5 8.0 1.7 2.2 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein Exonuc_VII_L PF02601.15 ORF23394 - 0.76 9.3 16.9 0.72 9.4 8.5 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit Bacillus_HBL PF05791.11 ORF23394 - 0.88 9.4 10.1 0.15 11.8 1.8 2.6 2 0 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Baculo_PEP_C PF04513.12 ORF23394 - 1 9.4 11.7 1.8 8.6 0.7 3.4 3 2 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4407 PF14362.6 ORF23394 - 1.6 8.0 32.5 0.28 10.5 7.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Folliculin PF11704.8 ORF23394 - 1.6 8.6 6.9 0.63 9.9 1.8 2.2 2 0 0 2 2 2 0 Vesicle coat protein involved in Golgi to plasma membrane transport DUF812 PF05667.11 ORF23394 - 3.4 6.4 28.9 0.028 13.3 14.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Carbpep_Y_N PF05388.11 ORF23394 - 4.4 7.9 8.0 0.65 10.6 0.3 2.9 2 2 1 3 3 3 0 Carboxypeptidase Y pro-peptide BORCS8 PF10167.9 ORF23394 - 7.7 6.5 7.1 22 5.1 0.1 3.4 3 1 0 3 3 3 0 BLOC-1-related complex sub-unit 8 Jnk-SapK_ap_N PF09744.9 ORF23394 - 8.1 6.7 20.8 12 6.1 6.0 2.5 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 AAA PF00004.29 ORF14941 - 6.1e-42 143.2 0.0 1.1e-41 142.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF14941 - 8.3e-14 51.3 0.1 4.8e-13 48.9 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain MIT PF04212.18 ORF14941 - 2.9e-07 30.4 5.7 8.3e-07 29.0 5.7 1.8 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_lid_3 PF17862.1 ORF14941 - 4.2e-06 26.5 0.0 1.3e-05 24.9 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF14941 - 2.3e-05 24.9 0.0 0.00089 19.7 0.0 2.5 1 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF14941 - 7.8e-05 22.5 0.0 0.00014 21.6 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF14941 - 0.00022 21.2 0.0 0.00086 19.3 0.0 2.1 2 0 0 2 2 1 1 AAA domain AAA_5 PF07728.14 ORF14941 - 0.00038 20.5 0.0 0.0016 18.4 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF14941 - 0.0007 19.4 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF14941 - 0.0013 18.4 0.3 0.13 11.9 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF14941 - 0.0015 18.6 0.0 0.0046 17.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF14941 - 0.0017 18.6 0.4 0.046 14.0 0.2 3.0 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF14941 - 0.0042 16.3 0.0 0.007 15.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF14941 - 0.0058 16.8 0.0 0.01 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF14941 - 0.0077 16.6 0.0 0.025 15.0 0.0 2.0 1 0 0 1 1 1 1 RNA helicase AAA_18 PF13238.6 ORF14941 - 0.0077 16.8 0.0 0.02 15.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF14941 - 0.046 13.4 0.0 0.13 12.0 0.0 1.8 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF14941 - 0.054 13.2 0.0 0.68 9.6 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF14941 - 0.059 12.7 0.1 0.12 11.8 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF14941 - 0.074 12.2 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain USP8_dimer PF08969.11 ORF14941 - 0.082 13.1 5.1 0.096 12.9 3.5 2.0 2 0 0 2 2 2 0 USP8 dimerisation domain TPR_8 PF13181.6 ORF14941 - 0.11 12.8 0.9 0.38 11.1 0.3 2.4 2 0 0 2 2 1 0 Tetratricopeptide repeat CPT PF07931.12 ORF14941 - 0.14 12.0 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF14941 - 0.14 11.5 0.0 0.25 10.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF14941 - 0.16 11.5 0.3 0.51 9.8 0.0 2.0 2 1 0 2 2 1 0 P-loop containing dynein motor region Sec5 PF15469.6 ORF14941 - 1.3 8.8 3.8 26 4.6 2.2 2.3 2 0 0 2 2 2 0 Exocyst complex component Sec5 Aminotran_4 PF01063.19 ORF148749 - 4e-22 79.2 0.0 6.8e-22 78.4 0.0 1.2 1 0 0 1 1 1 1 Amino-transferase class IV zf-C3HC4_2 PF13923.6 ORF148749 - 0.047 13.5 3.0 0.16 11.9 3.0 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF148749 - 2.1 8.4 10.0 0.24 11.5 4.3 2.3 2 0 0 2 2 2 0 RING-type zinc-finger LamB PF02264.15 ORF140184 - 3.7e-83 280.5 19.7 4.2e-83 280.3 19.7 1.0 1 0 0 1 1 1 1 LamB porin TSP_1 PF00090.19 ORF139366 - 0.0019 18.4 21.2 0.0061 16.8 7.8 3.6 3 0 0 3 3 3 2 Thrombospondin type 1 domain TSP_1 PF00090.19 ORF136198 - 0.0019 18.4 21.2 0.0061 16.8 7.8 3.6 3 0 0 3 3 3 2 Thrombospondin type 1 domain Metallophos PF00149.28 ORF133668 - 6.1e-17 62.8 4.5 6.1e-17 62.8 4.5 1.5 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF133668 - 0.0038 17.5 0.0 0.031 14.5 0.0 2.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Anoctamin PF04547.12 ORF133499 - 1.7e-36 126.0 3.1 2.1e-36 125.7 3.1 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel PhoR PF11808.8 ORF133499 - 0.12 12.8 0.1 0.12 12.8 0.1 2.6 3 0 0 3 3 3 0 Phosphate regulon sensor protein PhoR EDR1 PF14381.6 ORF131821 - 0.046 13.4 0.9 0.099 12.3 0.9 1.6 1 0 0 1 1 1 0 Ethylene-responsive protein kinase Le-CTR1 Exonuc_VII_L PF02601.15 ORF131821 - 6 6.3 11.8 29 4.1 11.8 1.8 1 1 0 1 1 1 0 Exonuclease VII, large subunit DegQ PF08181.11 ORF131091 - 0.1 12.7 3.8 5.6 7.2 0.2 2.8 3 0 0 3 3 3 0 DegQ (SacQ) family SecD-TM1 PF13721.6 ORF131091 - 0.23 12.0 3.6 0.24 11.9 1.1 2.3 1 1 1 2 2 2 0 SecD export protein N-terminal TM region V-SNARE_C PF12352.8 ORF131091 - 0.79 10.0 7.6 0.81 10.0 1.0 2.8 2 1 0 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus DUF1664 PF07889.12 ORF131091 - 4.5 7.3 8.4 2 8.4 3.5 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) FapA PF03961.13 ORF131091 - 6.8 5.2 16.2 0.19 10.3 5.9 2.2 2 0 0 2 2 2 0 Flagellar Assembly Protein A EphA2_TM PF14575.6 ORF119495 - 0.023 15.5 4.1 8.9 7.3 0.0 4.8 4 2 0 4 4 4 0 Ephrin type-A receptor 2 transmembrane domain TMEM154 PF15102.6 ORF119495 - 2.1 8.2 7.0 1.4 8.8 0.1 3.3 3 0 0 3 3 3 0 TMEM154 protein family DUF4500 PF14937.6 ORF119495 - 4.1 7.5 11.6 3.5 7.7 0.8 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4500) DUF2207 PF09972.9 ORF119495 - 7.5 5.2 15.5 25 3.5 9.5 3.4 1 1 2 3 3 3 0 Predicted membrane protein (DUF2207) ERGIC_N PF13850.6 ORF119495 - 8.1 6.9 11.9 2 8.8 0.0 3.9 2 2 2 4 4 4 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Rcd1 PF04078.13 ORF113367 - 9.1e-102 339.8 7.5 1.2e-101 339.4 7.5 1.1 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like IL7 PF01415.16 ORF113367 - 0.022 14.8 1.2 0.063 13.3 1.2 1.8 1 0 0 1 1 1 0 Interleukin 7/9 family RESP18 PF14948.6 ORF113367 - 0.094 13.0 1.1 0.25 11.7 1.1 1.7 1 0 0 1 1 1 0 RESP18 domain PPL4 PF18188.1 ORF113367 - 0.1 12.6 0.1 0.24 11.3 0.1 1.6 1 0 0 1 1 1 0 Prim-pol 4 Peptidase_S10 PF00450.22 ORF103875 - 1.6e-117 393.5 0.3 2.1e-117 393.1 0.3 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase Sigma54_AID PF00309.20 ORF100382 - 0.32 10.9 1.1 0.87 9.5 0.5 1.9 2 0 0 2 2 2 0 Sigma-54 factor, Activator interacting domain (AID) Metallophos PF00149.28 ORF97991 - 2e-26 93.8 0.3 4.4e-25 89.4 0.3 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Y_phosphatase2 PF03162.13 ORF97991 - 0.25 10.9 0.0 0.4 10.2 0.0 1.3 1 0 0 1 1 1 0 Tyrosine phosphatase family Pkinase PF00069.25 ORF94307 - 5.8e-20 71.8 0.0 1.4e-19 70.5 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94307 - 2.3e-09 36.9 0.5 3.1e-07 29.9 0.2 2.9 2 1 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF94307 - 3.5e-06 27.1 0.7 8.3e-06 25.9 0.7 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF94307 - 0.00011 21.2 0.2 0.00019 20.5 0.2 1.3 1 0 0 1 1 1 1 Haspin like kinase domain EF-hand_7 PF13499.6 ORF94307 - 0.013 16.0 0.0 0.034 14.6 0.0 1.8 1 0 0 1 1 1 0 EF-hand domain pair RIO1 PF01163.22 ORF94307 - 0.047 13.3 0.1 0.11 12.0 0.0 1.7 2 0 0 2 2 2 0 RIO1 family RCC1 PF00415.18 ORF93760 - 4.5e-75 248.1 8.9 2.7e-12 47.1 0.1 7.2 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF93760 - 1.3e-31 107.7 26.6 1.3e-07 31.2 0.1 8.1 8 0 0 8 8 8 7 Regulator of chromosome condensation (RCC1) repeat Peptidase_C25_C PF03785.14 ORF93760 - 0.021 14.7 0.7 5.4 6.9 0.0 3.7 3 1 1 4 4 4 0 Peptidase family C25, C terminal ig-like domain Pepsin-I3 PF06394.13 ORF85904 - 0.053 13.7 4.9 0.12 12.6 0.4 3.2 3 0 0 3 3 3 0 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF85904 - 5.8 7.3 11.2 1 9.8 0.2 3.7 3 2 1 4 4 4 0 HalX domain Pkinase PF00069.25 ORF78515 - 1.2e-58 198.5 1.1 1.7e-58 198.0 1.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78515 - 7.4e-27 94.3 0.4 1.4e-26 93.3 0.2 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF78515 - 6.3e-05 22.4 0.0 0.00062 19.2 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF78515 - 0.00096 18.0 0.0 0.011 14.6 0.0 2.2 1 1 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF78515 - 0.03 13.7 0.0 0.074 12.4 0.0 1.6 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF78515 - 0.2 11.5 0.0 0.32 10.9 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family RPN6_N PF18055.1 ORF6541 - 2.9e-28 98.6 1.1 2.9e-28 98.6 1.1 2.6 2 0 0 2 2 2 1 26S proteasome regulatory subunit RPN6 N-terminal domain PCI PF01399.27 ORF6541 - 9e-16 58.3 0.3 9e-16 58.3 0.3 2.4 3 0 0 3 3 3 1 PCI domain RPN6_C_helix PF18503.1 ORF6541 - 1e-05 25.2 0.1 3.8e-05 23.3 0.0 2.1 2 0 0 2 2 2 1 26S proteasome subunit RPN6 C-terminal helix domain TPR_MalT PF17874.1 ORF6541 - 8.4e-05 22.1 0.1 0.0019 17.7 0.1 2.3 2 0 0 2 2 2 1 MalT-like TPR region TPR_12 PF13424.6 ORF6541 - 0.00011 22.5 0.2 0.016 15.5 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF6541 - 0.0013 19.2 0.0 1.6 9.3 0.0 3.1 4 0 0 4 4 4 2 Tetratricopeptide repeat SNAP PF14938.6 ORF6541 - 0.0013 18.2 0.1 0.02 14.3 0.0 2.6 2 2 0 2 2 2 1 Soluble NSF attachment protein, SNAP TPR_2 PF07719.17 ORF6541 - 0.25 11.5 1.3 4.6 7.6 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat Aminotran_1_2 PF00155.21 ORF63824 - 1.3e-40 139.7 0.0 1.7e-40 139.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF63824 - 0.0021 17.1 0.0 0.0028 16.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF63824 - 0.0058 15.2 0.0 0.0086 14.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 ORF63824 - 0.0063 15.9 0.0 0.0092 15.3 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family PP2C PF00481.21 ORF6213 - 1.2e-56 192.3 0.0 3.5e-56 190.7 0.0 1.7 2 0 0 2 2 2 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF6213 - 2e-11 43.9 1.5 7.8e-10 38.7 0.0 2.4 2 0 0 2 2 2 2 Protein phosphatase 2C Cas_Csy4 PF09618.10 ORF6213 - 0.25 11.5 5.0 0.42 10.8 5.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) Sugar_tr PF00083.24 ORF60895 - 4e-08 32.5 8.1 4e-08 32.5 8.1 2.5 1 1 0 2 2 2 1 Sugar (and other) transporter DUF2615 PF11027.8 ORF60895 - 0.73 10.0 2.7 28 4.9 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2615) Glyco_transf_34 PF05637.12 ORF57555 - 4.2e-09 36.5 0.1 0.00024 20.9 0.0 2.3 1 1 1 2 2 2 2 galactosyl transferase GMA12/MNN10 family RRM_1 PF00076.22 ORF57555 - 0.004 16.9 0.0 0.015 15.1 0.0 1.8 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RunxI PF08504.11 ORF49167 - 2 9.2 8.8 24 5.7 0.4 4.1 3 1 1 4 4 4 0 Runx inhibition domain MORN PF02493.20 ORF45071 - 0.0056 16.5 2.6 0.0056 16.5 2.6 3.5 4 0 0 4 4 4 1 MORN repeat Beta_helix PF13229.6 ORF45071 - 0.21 11.4 10.2 0.095 12.6 6.9 2.0 2 1 0 2 2 2 0 Right handed beta helix region Pepsin-I3 PF06394.13 ORF41169 - 0.053 13.7 4.9 0.12 12.6 0.4 3.2 3 0 0 3 3 3 0 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF41169 - 5.8 7.3 11.2 1 9.8 0.2 3.7 3 2 1 4 4 4 0 HalX domain Elongin_A PF06881.11 ORF38721 - 0.26 11.8 1.7 0.28 11.7 0.1 1.8 2 0 0 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A RCC1_2 PF13540.6 ORF32595 - 3.3e-14 52.2 25.2 0.64 9.9 0.1 9.4 9 0 0 9 9 9 7 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 ORF32595 - 1.7e-06 28.5 0.8 29 5.2 0.0 7.3 8 1 1 9 9 9 0 Spectrin repeat Cas_GSU0053 PF09617.10 ORF32595 - 0.0079 16.2 0.3 22 5.0 0.0 3.6 2 2 2 4 4 4 0 CRISPR-associated protein GSU0053 (Cas_GSU0053) AFP_2 PF18815.1 ORF32595 - 0.036 14.3 14.1 36 4.7 0.0 7.7 4 2 4 8 8 8 0 Bacterial antifreeze protein repeat DUF5616 PF18481.1 ORF32595 - 0.14 12.5 0.0 30 4.9 0.0 3.9 4 1 0 4 4 4 0 Domain of unknown function (DUF5616) Capsule_synth PF05159.14 ORF32595 - 0.15 11.5 0.9 14 5.1 0.0 3.4 2 2 2 4 4 4 0 Capsule polysaccharide biosynthesis protein Methyltransf_29 PF03141.16 ORF32595 - 0.28 9.7 7.7 50 2.3 0.0 5.5 4 3 1 6 6 6 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Equine_IAV_S2 PF06502.11 ORF32595 - 0.41 10.8 0.1 0.41 10.8 0.1 5.3 7 0 0 7 7 7 0 Equine infectious anaemia virus S2 protein Phage_fiber_C PF06820.12 ORF32595 - 6.6 7.2 8.7 8.2 6.9 0.1 4.5 3 2 2 5 5 5 0 Putative prophage tail fibre C-terminus ATP-grasp_2 PF08442.10 ORF25481 - 3.7e-63 212.8 0.1 7.2e-63 211.8 0.0 1.5 2 0 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 ORF25481 - 7e-16 58.4 0.2 1.4e-15 57.5 0.2 1.5 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 ORF25481 - 0.0036 16.8 0.0 0.035 13.6 0.0 2.2 1 1 0 1 1 1 1 ATP-grasp domain Ion_trans PF00520.31 ORF19851 - 4.8e-16 58.7 25.0 6.7e-16 58.2 25.0 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_5 PF13202.6 ORF19851 - 4e-10 38.7 1.3 5.4e-06 25.7 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 ORF19851 - 6.9e-09 34.6 0.9 4.9e-05 22.6 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF19851 - 2.2e-08 33.4 0.2 0.00062 19.5 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF19851 - 2.2e-06 28.0 0.4 6.6e-06 26.5 0.1 2.0 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF19851 - 2.8e-05 23.9 0.1 0.00083 19.2 0.0 2.6 2 0 0 2 2 2 1 EF-hand domain pair PEP-utilizers_C PF02896.18 ORF149546 - 4.1e-74 249.3 0.1 5e-74 249.1 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain Ammonium_transp PF00909.21 ORF147502 - 4e-131 437.4 40.5 4.5e-131 437.2 40.5 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Kelch_2 PF07646.15 ORF146288 - 0.0016 18.4 0.2 21 5.3 0.0 4.1 4 0 0 4 4 4 1 Kelch motif Kelch_6 PF13964.6 ORF146288 - 0.01 16.1 2.1 1.8 8.9 0.2 3.8 4 0 0 4 4 4 0 Kelch motif Kelch_5 PF13854.6 ORF146288 - 0.012 15.6 2.4 13 5.9 0.2 3.4 3 0 0 3 3 3 0 Kelch motif Kelch_3 PF13415.6 ORF146288 - 0.072 13.4 0.0 3.1 8.2 0.0 2.9 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF146288 - 0.11 12.1 0.3 30 4.3 0.0 3.1 3 0 0 3 3 3 0 Kelch motif AA_kinase PF00696.28 ORF144751 - 3.8e-38 131.4 2.4 4.6e-38 131.2 2.4 1.1 1 0 0 1 1 1 1 Amino acid kinase family DHHC PF01529.20 ORF144228 - 9.4e-26 90.5 4.5 9.4e-26 90.5 4.5 2.2 2 1 0 2 2 2 1 DHHC palmitoyltransferase CLPTM1 PF05602.12 ORF13871 - 5.2e-85 286.0 13.0 7.1e-85 285.6 13.0 1.2 1 0 0 1 1 1 1 Cleft lip and palate transmembrane protein 1 (CLPTM1) PQ-loop PF04193.14 ORF13871 - 0.00023 20.9 4.0 0.015 15.1 0.2 2.8 2 1 0 2 2 2 2 PQ loop repeat TMEM208_SND2 PF05620.11 ORF13871 - 1.6 8.5 5.8 13 5.6 0.4 3.2 3 0 0 3 3 3 0 SRP-independent targeting protein 2/TMEM208 CDC45 PF02724.14 ORF13871 - 2.8 6.1 11.0 4.4 5.5 11.0 1.3 1 0 0 1 1 1 0 CDC45-like protein DUF1645 PF07816.11 ORF138444 - 0.021 15.4 0.1 0.033 14.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1645) Methyltransf_24 PF13578.6 ORF134967 - 4.8e-07 30.8 0.0 9.7e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF134967 - 0.13 11.4 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase TryThrA_C PF12319.8 ORF13132 - 0.0055 16.2 3.9 0.013 15.0 3.9 1.6 1 0 0 1 1 1 1 Tryptophan-Threonine-rich plasmodium antigen C terminal DUF1664 PF07889.12 ORF13132 - 0.019 15.0 2.6 0.019 15.0 2.6 4.3 2 2 3 5 5 5 0 Protein of unknown function (DUF1664) NPV_P10 PF05531.12 ORF13132 - 0.13 12.7 7.8 9.3 6.8 0.1 5.3 3 3 2 5 5 5 0 Nucleopolyhedrovirus P10 protein DUF3037 PF11236.8 ORF13132 - 0.14 12.6 0.3 0.14 12.6 0.3 3.5 1 1 3 4 4 4 0 Protein of unknown function (DUF3037) FlaC_arch PF05377.11 ORF13132 - 0.18 12.2 0.2 0.18 12.2 0.2 5.3 5 1 1 6 6 6 0 Flagella accessory protein C (FlaC) Bep_C_terminal PF17841.1 ORF13132 - 0.24 11.7 4.1 4.1 7.7 0.3 3.0 3 0 0 3 3 3 0 BID domain of Bartonella effector protein (Bep) JIP_LZII PF16471.5 ORF13132 - 0.25 11.6 0.1 0.25 11.6 0.1 5.0 4 2 2 6 6 6 0 JNK-interacting protein leucine zipper II DUF1699 PF08004.11 ORF13132 - 0.35 10.6 5.5 0.86 9.3 0.0 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF1699) DUF3287 PF11690.8 ORF13132 - 0.58 9.9 4.5 10 5.9 1.7 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3287) HlyD_2 PF12700.7 ORF13132 - 1.3 7.7 5.5 0.58 8.8 1.7 2.0 2 0 0 2 2 2 0 HlyD family secretion protein Sipho_Gp157 PF05565.11 ORF13132 - 1.8 8.6 13.5 0.4 10.7 1.4 3.4 3 1 1 4 4 4 0 Siphovirus Gp157 EzrA PF06160.12 ORF13132 - 2.1 6.4 16.1 0.018 13.3 5.2 2.4 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA Fib_alpha PF08702.10 ORF13132 - 2.5 8.3 27.6 2.2 8.5 2.3 4.3 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family FPP PF05911.11 ORF13132 - 6.3 4.9 37.4 0.064 11.5 14.0 2.2 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil MatP PF06303.12 ORF13132 - 7.2 7.2 8.5 0.53 10.9 1.2 2.9 2 1 1 3 3 3 0 MatP N-terminal domain Fzo_mitofusin PF04799.13 ORF13132 - 7.6 6.1 28.4 0.86 9.1 1.0 5.6 2 2 4 6 6 6 0 fzo-like conserved region HAD_2 PF13419.6 ORF129105 - 1.7e-25 90.1 0.0 2.3e-25 89.7 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF129105 - 5.9e-16 59.4 0.0 1e-14 55.4 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF129105 - 1e-09 39.1 0.0 1.5e-09 38.6 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF129105 - 3.1e-05 23.9 0.0 0.00013 22.0 0.0 2.0 3 0 0 3 3 3 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 ORF129105 - 0.0007 19.7 0.0 0.0035 17.4 0.0 2.1 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase zf-CCHC PF00098.23 ORF128582 - 1.4e-07 31.2 8.8 6.6e-06 26.0 2.1 4.2 4 0 0 4 4 4 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF128582 - 0.3 10.9 34.8 4 7.2 0.7 5.5 3 1 2 5 5 5 0 Zinc knuckle DUF4407 PF14362.6 ORF128582 - 0.79 9.0 5.4 1.4 8.2 5.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Pepsin-I3 PF06394.13 ORF101240 - 0.053 13.7 4.9 0.12 12.6 0.4 3.2 3 0 0 3 3 3 0 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF101240 - 5.8 7.3 11.2 1 9.8 0.2 3.7 3 2 1 4 4 4 0 HalX domain Topoisom_bac PF01131.20 ORF94430 - 2.1e-22 79.7 0.0 2.1e-22 79.7 0.0 1.8 2 0 0 2 2 2 1 DNA topoisomerase Toprim PF01751.22 ORF94430 - 6.4e-09 36.0 0.6 2e-08 34.4 0.0 2.2 3 1 0 3 3 3 1 Toprim domain Aminotran_1_2 PF00155.21 ORF93945 - 1.7e-50 172.2 0.0 2e-50 172.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 ORF93945 - 2.3e-05 23.1 0.0 4.3e-05 22.2 0.0 1.4 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DUF2322 PF10084.9 ORF93945 - 0.17 11.9 0.8 0.72 9.9 0.0 2.4 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2322) ABC_tran_CTD PF16326.5 ORF89201 - 0.069 13.4 0.2 0.069 13.4 0.2 3.3 4 0 0 4 4 4 0 ABC transporter C-terminal domain DUF4279 PF14106.6 ORF89201 - 0.07 13.3 0.0 0.19 11.9 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4279) PAP2 PF01569.21 ORF86177 - 2.9e-18 65.9 7.8 2.9e-18 65.9 7.8 2.2 2 1 0 2 2 2 1 PAP2 superfamily Plasmod_dom_1 PF09715.10 ORF86177 - 0.51 10.4 4.8 8.8 6.5 0.1 3.9 3 1 1 4 4 4 0 Plasmodium protein of unknown function (Plasmod_dom_1) Arrestin_N PF00339.29 ORF76001 - 3.5e-08 33.6 0.0 1e-07 32.1 0.0 1.8 2 0 0 2 2 2 1 Arrestin (or S-antigen), N-terminal domain Arrestin_C PF02752.22 ORF76001 - 5.2e-08 33.4 0.0 6.4e-06 26.7 0.0 2.2 2 0 0 2 2 2 2 Arrestin (or S-antigen), C-terminal domain UDPGT PF00201.18 ORF74593 - 2.9e-14 52.8 0.0 1.6e-13 50.3 0.0 2.1 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF74593 - 0.0002 21.4 0.0 0.00035 20.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Aminotran_1_2 PF00155.21 ORF71108 - 2.8e-48 164.9 0.0 3.2e-48 164.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 ORF71108 - 2.3e-05 23.1 0.0 5.7e-05 21.8 0.0 1.5 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_4 PF01063.19 ORF43030 - 2.1e-20 73.5 0.0 2.7e-20 73.2 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV zf-RING_2 PF13639.6 ORF27419 - 5.4e-11 42.6 6.3 5.4e-11 42.6 6.3 2.3 2 0 0 2 2 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF27419 - 6.9e-07 28.9 3.6 2.1e-06 27.3 3.6 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF27419 - 1.5e-05 25.1 7.7 7.2e-05 23.0 7.7 2.2 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF27419 - 4.1e-05 23.5 2.3 4.1e-05 23.5 2.3 2.5 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF27419 - 0.00028 20.7 2.4 0.00028 20.7 2.4 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF27419 - 0.00074 19.4 3.6 0.00074 19.4 3.6 2.3 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF27419 - 0.00094 19.0 6.5 0.00094 19.0 6.5 2.1 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) DUF4834 PF16118.5 ORF27419 - 0.0023 18.8 1.5 0.03 15.3 0.1 2.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4834) Mem_trans PF03547.18 ORF27419 - 0.0027 16.2 0.7 0.0049 15.3 0.7 1.5 1 0 0 1 1 1 1 Membrane transport protein zf-C3HC4 PF00097.25 ORF27419 - 0.0054 16.6 6.2 0.0054 16.6 6.2 2.5 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF27419 - 0.0083 15.7 3.5 0.0083 15.7 3.5 2.0 2 0 0 2 2 1 1 Zinc-ribbon, C4HC2 type Shisa PF13908.6 ORF27419 - 0.013 15.7 3.8 0.02 15.1 2.4 1.9 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator zf-ANAPC11 PF12861.7 ORF27419 - 0.016 15.3 4.3 0.074 13.1 4.3 2.1 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger CitMHS PF03600.16 ORF27419 - 0.019 14.1 0.0 0.026 13.7 0.0 1.3 1 0 0 1 1 1 0 Citrate transporter SLAC1 PF03595.17 ORF27419 - 0.024 13.9 15.4 0.035 13.3 15.4 1.1 1 0 0 1 1 1 0 Voltage-dependent anion channel Halogen_Hydrol PF10112.9 ORF27419 - 0.064 13.3 0.1 0.064 13.3 0.1 1.8 2 0 0 2 2 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein RINGv PF12906.7 ORF27419 - 0.071 13.2 7.6 0.18 12.0 7.6 1.7 1 0 0 1 1 1 0 RING-variant domain FANCL_C PF11793.8 ORF27419 - 0.18 12.0 7.0 0.75 10.0 7.0 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain DUF1772 PF08592.11 ORF27419 - 0.21 11.9 0.1 0.21 11.9 0.1 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF1772) Prok-RING_1 PF14446.6 ORF27419 - 0.25 11.3 4.4 0.34 10.9 0.4 2.5 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 DUF5527 PF17665.1 ORF27419 - 0.71 9.4 6.6 0.66 9.5 3.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5527) PAP2_3 PF14378.6 ORF27419 - 4.6 6.9 11.3 3 7.5 0.7 2.4 1 1 0 2 2 2 0 PAP2 superfamily Sigma_reg_N PF13800.6 ORF27419 - 4.7 7.6 9.1 8.4 6.8 0.5 3.3 3 0 0 3 3 3 0 Sigma factor regulator N-terminal UL45 PF05473.12 ORF27419 - 7.8 6.1 8.1 8.3 6.0 0.2 2.6 2 0 0 2 2 2 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF4191 PF13829.6 ORF27419 - 8 5.7 7.6 18 4.6 7.6 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Fer4_11 PF13247.6 ORF26940 - 7.6e-38 128.7 5.9 2e-37 127.3 5.9 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Nitr_red_bet_C PF14711.6 ORF26940 - 2.1e-31 107.4 0.0 4e-31 106.5 0.0 1.5 1 0 0 1 1 1 1 Respiratory nitrate reductase beta C-terminal Fer4_10 PF13237.6 ORF26940 - 9.3e-06 25.7 4.1 9.3e-06 25.7 4.1 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF26940 - 1.2e-05 25.8 5.5 1.2e-05 25.8 5.5 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF26940 - 5.1e-05 23.2 11.5 0.0022 18.0 0.2 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4 PF00037.27 ORF26940 - 5.7 6.9 15.9 1.4 8.9 0.9 4.0 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_4 PF12800.7 ORF26940 - 7.2 7.4 15.6 0.82 10.3 0.9 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_9 PF13187.6 ORF26940 - 7.5 6.8 19.5 3.7 7.8 13.4 3.0 2 1 0 2 2 2 0 4Fe-4S dicluster domain VSP PF03302.13 ORF24503 - 9.9e-07 27.9 19.7 9.9e-07 27.9 19.7 2.3 1 1 1 2 2 2 2 Giardia variant-specific surface protein Dabb PF07876.12 ORF21150 - 0.00017 22.2 4.5 0.4 11.3 0.0 3.5 3 0 0 3 3 3 2 Stress responsive A/B Barrel Domain GRIP PF01465.20 ORF21150 - 0.062 13.2 0.2 0.14 12.0 0.2 1.6 1 0 0 1 1 1 0 GRIP domain bPH_1 PF08000.11 ORF18109 - 5e-06 26.6 3.8 2.1e-05 24.6 3.8 2.1 1 1 0 1 1 1 1 Bacterial PH domain DUF4094 PF13334.6 ORF18109 - 1.8 9.1 3.8 5.9 7.4 0.8 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) NMT PF01233.19 ORF151606 - 6.3e-73 243.9 0.3 2.8e-71 238.5 0.0 2.3 2 0 0 2 2 2 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain NMT_C PF02799.15 ORF151606 - 3.1e-66 222.9 4.8 3.1e-66 222.9 4.8 1.6 2 0 0 2 2 2 1 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain Acetyltransf_9 PF13527.7 ORF151606 - 2.1e-05 24.6 0.0 0.00028 21.0 0.0 2.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF151606 - 0.029 14.6 0.0 0.065 13.5 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family FOP_dimer PF09398.10 ORF151606 - 0.068 13.4 0.4 0.37 11.1 0.1 2.4 1 1 0 1 1 1 0 FOP N terminal dimerisation domain AAA_33 PF13671.6 ORF150776 - 1.5e-15 57.6 3.5 6.7e-08 32.8 0.1 2.9 2 1 1 3 3 3 2 AAA domain La PF05383.17 ORF150776 - 3.1e-15 56.0 0.0 7.3e-15 54.8 0.0 1.6 2 0 0 2 2 2 1 La domain KTI12 PF08433.10 ORF150776 - 0.00089 18.8 0.1 0.55 9.6 0.0 2.3 1 1 1 2 2 2 2 Chromatin associated protein KTI12 AAA_18 PF13238.6 ORF150776 - 0.0018 18.8 0.3 1.3 9.6 0.1 2.6 1 1 1 2 2 2 2 AAA domain AAA_22 PF13401.6 ORF150776 - 0.0043 17.3 0.0 0.056 13.7 0.0 2.5 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 ORF150776 - 0.028 14.8 0.1 6.7 7.1 0.0 2.6 1 1 1 2 2 2 0 AAA domain Ploopntkinase3 PF18751.1 ORF150776 - 0.038 13.9 0.0 0.077 12.9 0.0 1.5 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_28 PF13521.6 ORF150776 - 0.044 14.0 1.9 0.18 12.0 0.8 2.6 1 1 1 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF150776 - 0.13 12.3 0.4 0.4 10.7 0.1 2.0 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF150776 - 3.5 8.0 7.1 9.3 6.6 4.2 2.8 2 1 0 2 2 2 0 AAA ATPase domain DUF664 PF04978.12 ORF150776 - 6.6 7.1 10.1 0.97 9.8 1.7 3.0 3 1 1 4 4 4 0 Protein of unknown function (DUF664) Myb_DNA-bind_3 PF12776.7 ORF146698 - 0.16 13.0 2.7 2.1 9.4 0.5 2.8 3 0 0 3 3 3 0 Myb/SANT-like DNA-binding domain Pkinase_Tyr PF07714.17 ORF143823 - 7.6e-54 182.7 0.0 1.3e-53 181.9 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF143823 - 4e-51 173.9 0.1 7.9e-51 172.9 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Kdo PF06293.14 ORF143823 - 8.9e-05 21.9 0.0 0.00017 21.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF143823 - 0.00011 21.3 0.2 0.00041 19.4 0.0 1.8 2 0 0 2 2 2 1 Haspin like kinase domain RIO1 PF01163.22 ORF143823 - 0.0011 18.6 0.8 0.0016 18.0 0.1 1.6 2 0 0 2 2 2 1 RIO1 family Pkinase_fungal PF17667.1 ORF143823 - 0.0011 17.8 0.2 0.0026 16.6 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase Kinase-like PF14531.6 ORF143823 - 0.003 16.9 0.0 0.0043 16.4 0.0 1.2 1 0 0 1 1 1 1 Kinase-like HAP1_N PF04849.13 ORF143823 - 0.0071 15.6 0.3 0.011 15.0 0.3 1.2 1 0 0 1 1 1 1 HAP1 N-terminal conserved region Pil1 PF13805.6 ORF143823 - 0.022 14.2 3.2 0.045 13.3 1.0 2.1 1 1 1 2 2 2 0 Eisosome component PIL1 DivIC PF04977.15 ORF143823 - 0.023 14.4 0.2 1.7 8.5 0.2 2.5 2 0 0 2 2 2 0 Septum formation initiator Spectrin PF00435.21 ORF143823 - 0.033 14.7 0.7 0.12 12.8 0.3 2.0 2 0 0 2 2 2 0 Spectrin repeat DUF1843 PF08898.10 ORF143823 - 0.034 14.6 0.6 0.034 14.6 0.6 2.7 3 0 0 3 3 2 0 Domain of unknown function (DUF1843) Tup_N PF08581.10 ORF143823 - 0.054 13.8 0.5 8.6 6.7 0.4 2.6 2 0 0 2 2 2 0 Tup N-terminal APH PF01636.23 ORF143823 - 0.085 12.8 0.0 0.2 11.5 0.0 1.6 2 0 0 2 2 2 0 Phosphotransferase enzyme family FlxA PF14282.6 ORF143823 - 0.16 12.0 4.0 0.72 9.9 0.7 2.3 2 0 0 2 2 2 0 FlxA-like protein TSC22 PF01166.18 ORF143823 - 0.23 11.8 1.4 5.1 7.5 0.0 2.9 2 1 0 2 2 2 0 TSC-22/dip/bun family TPR_MLP1_2 PF07926.12 ORF143823 - 0.34 11.0 4.0 2.8 8.0 0.0 2.2 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein Choline_kinase PF01633.20 ORF143823 - 0.48 10.0 2.3 4.3 6.9 0.1 2.2 2 0 0 2 2 2 0 Choline/ethanolamine kinase bZIP_2 PF07716.15 ORF143823 - 1.1 9.4 7.1 6.1 7.0 3.3 2.5 2 0 0 2 2 2 0 Basic region leucine zipper Chloroa_b-bind PF00504.21 ORF143458 - 2.2e-51 174.6 1.5 3.1e-27 96.1 0.1 2.2 2 0 0 2 2 2 2 Chlorophyll A-B binding protein p450 PF00067.22 ORF1322 - 3.8e-45 154.5 0.0 4.5e-45 154.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 PAP2 PF01569.21 ORF129840 - 2.9e-18 65.9 7.8 2.9e-18 65.9 7.8 2.2 2 1 0 2 2 2 1 PAP2 superfamily Plasmod_dom_1 PF09715.10 ORF129840 - 0.51 10.4 4.8 8.8 6.5 0.1 3.9 3 1 1 4 4 4 0 Plasmodium protein of unknown function (Plasmod_dom_1) Zip PF02535.22 ORF12892 - 5.2e-42 144.3 10.1 2.9e-41 141.8 10.1 2.0 1 1 0 1 1 1 1 ZIP Zinc transporter GEMIN8 PF15348.6 ORF12892 - 0.0089 16.4 4.9 0.013 15.8 4.9 1.3 1 0 0 1 1 1 1 Gemini of Cajal bodies-associated protein 8 Pirin PF02678.16 ORF121586 - 5.5e-24 84.2 0.7 9.1e-24 83.5 0.7 1.3 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 ORF121586 - 4.4e-16 59.1 0.0 7.7e-16 58.3 0.0 1.3 1 0 0 1 1 1 1 Pirin C-terminal cupin domain Cornifin PF02389.15 NODE_11859_length_1279_cov_263.308682_g3440_i2reverse_frame_3 - 9.2e-07 29.1 10.9 0.001 19.3 1.4 2.2 1 1 1 2 2 2 2 Cornifin (SPRR) family AAA PF00004.29 ORF9773 - 6e-42 143.2 0.0 1e-41 142.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF9773 - 3e-16 59.1 0.1 1.8e-15 56.7 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain MIT PF04212.18 ORF9773 - 2.7e-07 30.5 5.7 8.2e-07 29.0 5.7 1.9 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_lid_3 PF17862.1 ORF9773 - 4.1e-06 26.5 0.0 1.3e-05 24.9 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF9773 - 2.2e-05 24.9 0.0 0.00088 19.7 0.0 2.6 1 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF9773 - 7.7e-05 22.5 0.0 0.00014 21.6 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF9773 - 0.00022 21.3 0.0 0.00085 19.4 0.0 2.1 2 0 0 2 2 1 1 AAA domain AAA_5 PF07728.14 ORF9773 - 0.00037 20.5 0.0 0.0016 18.5 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF9773 - 0.00069 19.4 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF9773 - 0.0012 18.4 0.3 0.12 11.9 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF9773 - 0.0015 18.7 0.0 0.0045 17.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF9773 - 0.0016 18.7 0.4 0.045 14.0 0.2 3.0 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF9773 - 0.0041 16.3 0.0 0.0069 15.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF9773 - 0.0057 16.8 0.0 0.01 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF9773 - 0.0075 16.6 0.0 0.025 15.0 0.0 2.0 1 0 0 1 1 1 1 RNA helicase AAA_18 PF13238.6 ORF9773 - 0.0076 16.8 0.0 0.02 15.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF9773 - 0.04 13.6 0.0 0.13 12.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF9773 - 0.052 13.2 0.0 0.67 9.6 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF9773 - 0.059 12.8 0.1 0.12 11.8 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF9773 - 0.073 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain USP8_dimer PF08969.11 ORF9773 - 0.08 13.1 5.1 0.095 12.9 3.5 2.0 2 0 0 2 2 2 0 USP8 dimerisation domain TPR_8 PF13181.6 ORF9773 - 0.11 12.8 2.4 0.37 11.1 0.3 2.9 3 0 0 3 3 2 0 Tetratricopeptide repeat CPT PF07931.12 ORF9773 - 0.14 12.0 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF9773 - 0.14 11.6 0.0 0.25 10.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF9773 - 0.15 11.5 0.3 0.5 9.8 0.0 2.0 2 1 0 2 2 2 0 P-loop containing dynein motor region Sec5 PF15469.6 ORF9773 - 1.3 8.8 3.8 26 4.6 2.2 2.3 2 0 0 2 2 2 0 Exocyst complex component Sec5 PEP-utilizers_C PF02896.18 ORF95811 - 2.8e-90 302.4 0.0 3.7e-90 302.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PTS_EIIA_2 PF00359.22 ORF95811 - 1.5e-33 115.8 0.0 2.7e-33 114.9 0.0 1.4 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OSTbeta PF15048.6 ORF93657 - 0.14 12.3 0.1 0.61 10.2 0.0 2.1 2 0 0 2 2 2 0 Organic solute transporter subunit beta protein GpcrRhopsn4 PF10192.9 ORF90442 - 4.2e-48 164.0 20.7 4.2e-48 164.0 20.7 1.6 2 0 0 2 2 2 1 Rhodopsin-like GPCR transmembrane domain Lung_7-TM_R PF06814.13 ORF90442 - 7.5e-05 22.1 14.9 7.5e-05 22.1 14.9 2.1 2 1 1 3 3 3 1 Lung seven transmembrane receptor DUF4271 PF14093.6 ORF90442 - 0.01 15.8 8.3 0.01 15.8 8.3 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4271) YoqO PF14037.6 ORF90442 - 0.016 15.8 1.2 0.016 15.8 1.2 3.7 3 1 2 5 5 5 0 YoqO-like protein DAO PF01266.24 ORF90408 - 1.4e-55 189.3 0.3 1.6e-55 189.1 0.3 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 ORF90408 - 4.9e-07 29.2 0.2 8.5e-07 28.4 0.2 1.4 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.6 ORF90408 - 6.8e-06 26.2 0.7 2.6e-05 24.3 0.7 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 ORF90408 - 1.4e-05 24.6 0.6 1.4e-05 24.6 0.6 1.7 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 ORF90408 - 5.1e-05 22.7 1.7 0.021 14.1 0.2 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF90408 - 8.4e-05 21.8 1.7 0.00014 21.1 1.7 1.3 1 0 0 1 1 1 1 FAD binding domain Amino_oxidase PF01593.24 ORF90408 - 0.00015 21.2 0.5 0.0029 16.9 0.2 2.1 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Pyr_redox_2 PF07992.14 ORF90408 - 0.00017 21.0 0.2 0.00038 19.8 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF90408 - 0.00046 19.4 0.4 0.011 14.8 0.1 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A UDPG_MGDP_dh_N PF03721.14 ORF90408 - 0.00097 18.8 0.4 0.0016 18.0 0.4 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_oxidored PF12831.7 ORF90408 - 0.0047 16.3 0.2 0.0067 15.8 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 ORF90408 - 0.0085 14.8 0.6 0.028 13.1 0.1 1.9 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.27 ORF90408 - 0.0094 16.5 0.3 0.021 15.4 0.3 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 ORF90408 - 0.024 15.1 0.0 0.049 14.1 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding Lycopene_cycl PF05834.12 ORF90408 - 0.041 12.9 2.1 0.041 12.9 0.4 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein ApbA PF02558.16 ORF90408 - 0.056 13.1 0.4 3.8 7.2 0.2 2.2 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Trp_halogenase PF04820.14 ORF90408 - 0.079 11.8 0.1 0.11 11.3 0.1 1.2 1 0 0 1 1 1 0 Tryptophan halogenase 3HCDH_N PF02737.18 ORF90408 - 0.11 12.4 0.6 0.22 11.4 0.6 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 ORF90408 - 0.31 11.0 0.0 0.31 11.0 0.0 2.1 3 0 0 3 3 3 0 FAD-NAD(P)-binding Pkinase PF00069.25 ORF86759 - 4.3e-61 206.6 0.1 8.6e-61 205.6 0.1 1.5 1 0 0 1 1 1 1 Protein kinase domain EF-hand_1 PF00036.32 ORF86759 - 2.5e-30 101.7 15.0 1.5e-08 33.6 1.8 4.7 4 0 0 4 4 4 4 EF hand Pkinase_Tyr PF07714.17 ORF86759 - 2.9e-30 105.4 0.3 5.3e-30 104.6 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF86759 - 2.6e-24 85.4 7.6 1.4e-11 44.6 0.1 3.2 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF86759 - 1.7e-23 81.0 15.8 5e-06 25.8 0.8 4.5 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF86759 - 2.6e-23 79.9 12.1 1.4e-06 27.7 0.4 4.7 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF86759 - 1.7e-15 56.6 13.6 8.2e-07 28.8 3.4 4.5 1 1 3 4 4 4 4 EF-hand domain pair Pkinase_fungal PF17667.1 ORF86759 - 1.5e-08 33.9 0.2 1.4e-07 30.7 0.1 2.0 2 0 0 2 2 2 1 Fungal protein kinase SPARC_Ca_bdg PF10591.9 ORF86759 - 2.5e-07 31.0 1.4 0.0063 16.8 0.2 2.6 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF86759 - 1.3e-06 27.9 0.1 3e-06 26.7 0.1 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family DUF1679 PF07914.11 ORF86759 - 0.00098 18.1 1.8 0.016 14.1 0.1 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF1679) Haemagg_act PF05860.13 ORF86759 - 0.011 15.6 4.3 0.41 10.6 0.3 3.1 1 1 1 2 2 2 0 haemagglutination activity domain YrbL-PhoP_reg PF10707.9 ORF86759 - 0.013 15.0 1.5 0.023 14.2 0.1 2.0 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL EF-hand_4 PF12763.7 ORF86759 - 0.014 15.3 7.3 5.2 7.1 0.0 4.1 1 1 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand RIO1 PF01163.22 ORF86759 - 0.017 14.7 0.5 0.017 14.7 0.5 1.8 2 0 0 2 2 2 0 RIO1 family Zfx_Zfy_act PF04704.13 ORF86759 - 0.018 14.2 0.0 0.031 13.4 0.0 1.3 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region Dockerin_1 PF00404.18 ORF86759 - 0.023 14.9 7.7 1.8 8.8 0.1 4.2 3 1 0 3 3 3 0 Dockerin type I domain Spidroin_N PF16763.5 ORF86759 - 0.026 14.5 0.7 3.1 7.9 0.1 2.7 2 0 0 2 2 2 0 Major ampullate spidroin 1, spider silk protein 1, N-term EcKinase PF02958.20 ORF86759 - 0.037 13.3 0.2 0.037 13.3 0.2 1.7 2 0 0 2 2 2 0 Ecdysteroid kinase APH PF01636.23 ORF86759 - 0.042 13.8 0.0 0.068 13.1 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family EF-hand_9 PF14658.6 ORF86759 - 0.056 13.8 0.8 1.5 9.2 0.2 2.9 2 1 0 3 3 2 0 EF-hand domain Caleosin PF05042.13 ORF86759 - 0.064 13.2 0.5 19 5.1 0.0 3.0 1 1 1 3 3 3 0 Caleosin related protein Phage_int_SAM_5 PF13102.6 ORF86759 - 0.14 12.5 2.1 2.7 8.4 0.6 2.9 2 0 0 2 2 2 0 Phage integrase SAM-like domain CAP PF00188.26 ORF84060 - 2.7e-10 41.1 0.0 0.00014 22.7 0.0 2.3 2 0 0 2 2 2 2 Cysteine-rich secretory protein family Globin PF00042.22 ORF8092 - 0.14 12.7 0.4 12 6.6 0.0 3.5 2 1 2 4 4 4 0 Globin FtsQ PF03799.15 ORF8092 - 0.31 11.9 3.1 27 5.6 0.0 3.2 1 1 1 2 2 2 0 Cell division protein FtsQ PKcGMP_CC PF16808.5 ORF8092 - 0.42 10.5 14.7 0.6 10.0 5.7 3.3 2 1 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase HIP1_clath_bdg PF16515.5 ORF8092 - 0.51 11.0 16.2 0.63 10.7 5.1 3.3 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Lebercilin PF15619.6 ORF8092 - 0.52 9.9 22.1 0.37 10.4 19.5 2.0 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease DUF4407 PF14362.6 ORF8092 - 1.2 8.4 7.9 2.1 7.6 7.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) V_ATPase_I PF01496.19 ORF8092 - 4.7 5.0 9.7 0.61 7.9 3.0 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Fib_alpha PF08702.10 ORF8092 - 7.4 6.8 8.6 20 5.3 3.1 3.2 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 ORF8092 - 9.6 5.7 13.4 58 3.1 13.9 1.9 1 1 1 2 2 2 0 Exonuclease VII, large subunit PAP_assoc PF03828.19 ORF75729 - 2.1e-13 50.3 0.0 3.7e-13 49.5 0.0 1.5 1 0 0 1 1 1 1 Cid1 family poly A polymerase Nucleoside_tran PF01733.18 ORF69980 - 8.7e-22 77.9 3.9 1.4e-21 77.2 3.9 1.3 1 0 0 1 1 1 1 Nucleoside transporter CRAL_TRIO PF00650.20 ORF68726 - 0.0002 21.1 0.0 0.00033 20.4 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain Actin PF00022.19 ORF57331 - 6.2e-114 380.8 0.0 6.9e-114 380.6 0.0 1.0 1 0 0 1 1 1 1 Actin Put_Phosphatase PF06888.12 ORF57331 - 0.0026 17.2 0.6 0.0047 16.3 0.6 1.3 1 0 0 1 1 1 1 Putative Phosphatase DUF1027 PF06265.11 ORF57331 - 0.0049 16.8 0.3 5.7 7.0 0.2 3.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1027) FtsA PF14450.6 ORF57331 - 0.051 14.0 0.2 4.4 7.8 0.0 2.9 3 0 0 3 3 3 0 Cell division protein FtsA MreB_Mbl PF06723.13 ORF57331 - 0.056 12.2 0.0 3.7 6.3 0.0 2.4 2 1 0 2 2 2 0 MreB/Mbl protein DJ-1_PfpI PF01965.24 ORF57331 - 0.08 12.7 0.0 0.45 10.3 0.0 2.2 2 0 0 2 2 2 0 DJ-1/PfpI family WD40 PF00400.32 ORF55291 - 4.6e-23 81.1 8.4 0.0047 17.8 0.1 6.7 6 0 0 6 6 6 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF55291 - 0.0018 18.6 0.1 0.91 9.9 0.0 3.1 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF55291 - 0.0018 17.6 1.0 0.92 8.8 0.1 2.9 2 1 0 3 3 3 2 WD40-like domain E7R PF17467.2 ORF55291 - 0.86 9.8 4.7 0.96 9.6 0.2 3.1 4 0 0 4 4 4 0 Viral Protein E7 MCR_alpha_N PF02745.15 ORF52104 - 0.0042 16.5 0.0 0.0042 16.5 0.0 2.6 3 1 1 4 4 4 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain LAP1C PF05609.12 ORF52104 - 0.14 11.2 33.3 0.92 8.5 29.7 2.1 2 0 0 2 2 2 0 Lamina-associated polypeptide 1C (LAP1C) CrgA PF06781.12 ORF52104 - 1.2 9.2 0.0 1.2 9.2 0.0 2.9 2 1 0 2 2 2 0 Cell division protein CrgA Ion_trans PF00520.31 ORF45012 - 5.4e-17 61.8 20.1 8.2e-17 61.2 20.1 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF45012 - 0.0049 16.7 0.3 0.073 13.0 0.1 2.7 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF45012 - 0.083 12.5 0.1 0.27 10.9 0.1 2.0 1 0 0 1 1 1 0 EF hand AAA PF00004.29 ORF44505 - 6e-42 143.2 0.0 1e-41 142.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF44505 - 3e-16 59.1 0.1 1.8e-15 56.7 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain MIT PF04212.18 ORF44505 - 2.7e-07 30.5 5.7 8.2e-07 29.0 5.7 1.9 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_lid_3 PF17862.1 ORF44505 - 4.1e-06 26.5 0.0 1.3e-05 24.9 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF44505 - 2.2e-05 24.9 0.0 0.00088 19.7 0.0 2.6 1 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF44505 - 7.7e-05 22.5 0.0 0.00014 21.6 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF44505 - 0.00022 21.3 0.0 0.00085 19.4 0.0 2.1 2 0 0 2 2 1 1 AAA domain AAA_5 PF07728.14 ORF44505 - 0.00037 20.5 0.0 0.0016 18.5 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF44505 - 0.00069 19.4 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF44505 - 0.0012 18.4 0.3 0.12 11.9 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF44505 - 0.0015 18.7 0.0 0.0045 17.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF44505 - 0.0016 18.7 0.4 0.045 14.0 0.2 3.0 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF44505 - 0.0041 16.3 0.0 0.0069 15.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF44505 - 0.0057 16.8 0.0 0.01 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF44505 - 0.0075 16.6 0.0 0.025 15.0 0.0 2.0 1 0 0 1 1 1 1 RNA helicase AAA_18 PF13238.6 ORF44505 - 0.0076 16.8 0.0 0.02 15.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF44505 - 0.04 13.6 0.0 0.13 12.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF44505 - 0.052 13.2 0.0 0.67 9.6 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF44505 - 0.059 12.8 0.1 0.12 11.8 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF44505 - 0.073 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain USP8_dimer PF08969.11 ORF44505 - 0.08 13.1 5.1 0.095 12.9 3.5 2.0 2 0 0 2 2 2 0 USP8 dimerisation domain TPR_8 PF13181.6 ORF44505 - 0.11 12.8 2.4 0.37 11.1 0.3 2.9 3 0 0 3 3 2 0 Tetratricopeptide repeat CPT PF07931.12 ORF44505 - 0.14 12.0 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF44505 - 0.14 11.6 0.0 0.25 10.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF44505 - 0.15 11.5 0.3 0.5 9.8 0.0 2.0 2 1 0 2 2 2 0 P-loop containing dynein motor region Sec5 PF15469.6 ORF44505 - 1.3 8.8 3.8 26 4.6 2.2 2.3 2 0 0 2 2 2 0 Exocyst complex component Sec5 CRAL_TRIO PF00650.20 ORF4085 - 0.0002 21.1 0.0 0.00033 20.4 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain PP2C PF00481.21 ORF37073 - 6.2e-37 127.6 0.0 8.9e-37 127.1 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF37073 - 1.3e-05 25.2 0.0 0.11 12.4 0.0 2.2 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) AAA PF00004.29 ORF271 - 6e-42 143.2 0.0 1e-41 142.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF271 - 3e-16 59.1 0.1 1.8e-15 56.7 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain MIT PF04212.18 ORF271 - 2.7e-07 30.5 5.7 8.2e-07 29.0 5.7 1.9 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_lid_3 PF17862.1 ORF271 - 4.1e-06 26.5 0.0 1.3e-05 24.9 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF271 - 2.2e-05 24.9 0.0 0.00088 19.7 0.0 2.6 1 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF271 - 7.7e-05 22.5 0.0 0.00014 21.6 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF271 - 0.00022 21.3 0.0 0.00085 19.4 0.0 2.1 2 0 0 2 2 1 1 AAA domain AAA_5 PF07728.14 ORF271 - 0.00037 20.5 0.0 0.0016 18.5 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF271 - 0.00069 19.4 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF271 - 0.0012 18.4 0.3 0.12 11.9 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF271 - 0.0015 18.7 0.0 0.0045 17.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF271 - 0.0016 18.7 0.4 0.045 14.0 0.2 3.0 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF271 - 0.0041 16.3 0.0 0.0069 15.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF271 - 0.0057 16.8 0.0 0.01 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF271 - 0.0075 16.6 0.0 0.025 15.0 0.0 2.0 1 0 0 1 1 1 1 RNA helicase AAA_18 PF13238.6 ORF271 - 0.0076 16.8 0.0 0.02 15.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF271 - 0.04 13.6 0.0 0.13 12.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF271 - 0.052 13.2 0.0 0.67 9.6 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF271 - 0.059 12.8 0.1 0.12 11.8 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF271 - 0.073 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain USP8_dimer PF08969.11 ORF271 - 0.08 13.1 5.1 0.095 12.9 3.5 2.0 2 0 0 2 2 2 0 USP8 dimerisation domain TPR_8 PF13181.6 ORF271 - 0.11 12.8 2.4 0.37 11.1 0.3 2.9 3 0 0 3 3 2 0 Tetratricopeptide repeat CPT PF07931.12 ORF271 - 0.14 12.0 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF271 - 0.14 11.6 0.0 0.25 10.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF271 - 0.15 11.5 0.3 0.5 9.8 0.0 2.0 2 1 0 2 2 2 0 P-loop containing dynein motor region Sec5 PF15469.6 ORF271 - 1.3 8.8 3.8 26 4.6 2.2 2.3 2 0 0 2 2 2 0 Exocyst complex component Sec5 Myb_DNA-bind_2 PF08914.11 ORF25089 - 0.14 12.4 0.3 0.14 12.4 0.3 2.0 2 0 0 2 2 2 0 Rap1 Myb domain Glyco_hydro_30 PF02055.16 ORF18416 - 1.4e-64 218.3 0.0 3.9e-42 144.5 0.0 2.0 2 0 0 2 2 2 2 Glycosyl hydrolase family 30 TIM-barrel domain Glyco_hydro_30C PF17189.4 ORF18416 - 1.2e-12 47.9 0.0 3.7e-12 46.3 0.0 1.8 2 0 0 2 2 2 1 Glycosyl hydrolase family 30 beta sandwich domain Glyco_hydro_59 PF02057.15 ORF18416 - 1.9e-05 24.1 0.0 2.9e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 59 RNA_pol_Rpb2_4 PF04566.13 ORF13832 - 0.24 11.7 1.2 4 7.8 0.5 2.8 2 0 0 2 2 2 0 RNA polymerase Rpb2, domain 4 Abhydrolase_6 PF12697.7 ORF112599 - 5e-20 73.1 0.0 6.4e-20 72.7 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF112599 - 9.8e-08 31.5 0.2 1.8e-07 30.7 0.2 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF112599 - 1.7e-07 31.1 0.2 1.6e-05 24.7 0.1 2.2 2 0 0 2 2 2 1 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF112599 - 7.4e-07 29.5 0.1 3.2e-06 27.4 0.0 1.9 2 0 0 2 2 2 1 Thioesterase domain Lipase_3 PF01764.25 ORF112599 - 4.9e-06 26.4 0.0 1.1e-05 25.4 0.0 1.6 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 ORF112599 - 0.0059 16.4 0.1 0.013 15.3 0.1 1.5 1 1 0 1 1 1 1 PGAP1-like protein Pro_CA PF00484.19 ORF112599 - 0.013 15.8 1.2 0.036 14.3 0.1 2.3 2 1 1 3 3 3 0 Carbonic anhydrase Abhydrolase_3 PF07859.13 ORF112599 - 0.039 13.8 0.0 0.081 12.8 0.0 1.7 1 1 0 1 1 1 0 alpha/beta hydrolase fold UPF0227 PF05728.12 ORF112599 - 0.072 13.0 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) GAF PF01590.26 ORF109637 - 7.4e-10 39.6 0.0 1.8e-05 25.4 0.0 2.2 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 ORF109637 - 1.9e-07 31.4 0.0 0.0015 18.8 0.0 2.2 2 0 0 2 2 2 2 GAF domain PAS PF00989.25 ORF109637 - 0.0015 18.6 0.0 0.0036 17.3 0.0 1.8 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 ORF109637 - 0.0033 17.7 0.8 0.015 15.6 0.1 2.4 2 1 1 3 3 3 1 PAS domain GAF_3 PF13492.6 ORF109637 - 0.0036 17.6 0.0 1 9.7 0.0 2.4 2 1 0 2 2 2 2 GAF domain DUF2250 PF10007.9 ORF109637 - 2.2 8.5 4.9 2 8.6 0.5 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) AAA PF00004.29 ORF108094 - 6e-42 143.2 0.0 1e-41 142.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF108094 - 3e-16 59.1 0.1 1.8e-15 56.7 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain MIT PF04212.18 ORF108094 - 2.7e-07 30.5 5.7 8.2e-07 29.0 5.7 1.9 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_lid_3 PF17862.1 ORF108094 - 4.1e-06 26.5 0.0 1.3e-05 24.9 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF108094 - 2.2e-05 24.9 0.0 0.00088 19.7 0.0 2.6 1 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF108094 - 7.7e-05 22.5 0.0 0.00014 21.6 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF108094 - 0.00022 21.3 0.0 0.00085 19.4 0.0 2.1 2 0 0 2 2 1 1 AAA domain AAA_5 PF07728.14 ORF108094 - 0.00037 20.5 0.0 0.0016 18.5 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF108094 - 0.00069 19.4 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF108094 - 0.0012 18.4 0.3 0.12 11.9 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF108094 - 0.0015 18.7 0.0 0.0045 17.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF108094 - 0.0016 18.7 0.4 0.045 14.0 0.2 3.0 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF108094 - 0.0041 16.3 0.0 0.0069 15.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF108094 - 0.0057 16.8 0.0 0.01 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF108094 - 0.0075 16.6 0.0 0.025 15.0 0.0 2.0 1 0 0 1 1 1 1 RNA helicase AAA_18 PF13238.6 ORF108094 - 0.0076 16.8 0.0 0.02 15.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF108094 - 0.04 13.6 0.0 0.13 12.0 0.0 1.9 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF108094 - 0.052 13.2 0.0 0.67 9.6 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF108094 - 0.059 12.8 0.1 0.12 11.8 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF108094 - 0.073 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain USP8_dimer PF08969.11 ORF108094 - 0.08 13.1 5.1 0.095 12.9 3.5 2.0 2 0 0 2 2 2 0 USP8 dimerisation domain TPR_8 PF13181.6 ORF108094 - 0.11 12.8 2.4 0.37 11.1 0.3 2.9 3 0 0 3 3 2 0 Tetratricopeptide repeat CPT PF07931.12 ORF108094 - 0.14 12.0 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein PhoH PF02562.16 ORF108094 - 0.14 11.6 0.0 0.25 10.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 ORF108094 - 0.15 11.5 0.3 0.5 9.8 0.0 2.0 2 1 0 2 2 2 0 P-loop containing dynein motor region Sec5 PF15469.6 ORF108094 - 1.3 8.8 3.8 26 4.6 2.2 2.3 2 0 0 2 2 2 0 Exocyst complex component Sec5 UDPG_MGDP_dh_N PF03721.14 ORF105652 - 2.2e-63 213.2 0.2 5.8e-61 205.3 0.0 2.2 2 0 0 2 2 2 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 ORF105652 - 2.8e-27 94.7 0.0 5.3e-27 93.9 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 ORF105652 - 1.7e-18 66.9 0.0 5.4e-18 65.3 0.0 1.8 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 ORF105652 - 1.3e-06 28.7 0.1 1.7e-05 25.1 0.0 2.5 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 ORF105652 - 0.0013 18.1 0.2 0.25 10.7 0.1 2.3 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 ORF105652 - 0.0092 16.2 1.6 0.021 15.1 0.2 2.3 3 0 0 3 3 3 1 TrkA-N domain 3HCDH_N PF02737.18 ORF105652 - 0.012 15.5 0.1 0.026 14.4 0.1 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 ORF105652 - 0.015 14.9 0.2 0.31 10.7 0.1 2.9 2 1 0 2 2 2 0 Ketopantoate reductase PanE/ApbA CIF PF16374.5 ORF105652 - 0.03 14.4 0.0 0.057 13.5 0.0 1.4 1 0 0 1 1 1 0 Cycle inhibiting factor (CIF) NAD_Gly3P_dh_N PF01210.23 ORF105652 - 0.095 12.7 0.3 18 5.3 0.0 2.8 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Asp PF00026.23 ORF99297 - 2e-17 63.6 0.3 2.7e-17 63.2 0.3 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Alpha-amylase PF00128.24 ORF93848 - 6.6e-11 42.4 0.0 7.2e-07 29.1 0.0 2.9 2 1 0 2 2 2 2 Alpha amylase, catalytic domain Alpha-amylase_C PF02806.18 ORF93848 - 1.9e-09 37.8 0.0 4.3e-09 36.7 0.0 1.6 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain DS PF01916.17 ORF8958 - 2.6e-107 358.4 0.1 3.1e-107 358.1 0.1 1.1 1 0 0 1 1 1 1 Deoxyhypusine synthase HAD PF12710.7 ORF8958 - 0.16 12.3 0.0 0.42 11.0 0.0 1.7 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase BRF1 PF07741.13 ORF8611 - 6.6 7.1 19.1 0.74 10.2 6.1 3.3 3 0 0 3 3 3 0 Brf1-like TBP-binding domain SecD-TM1 PF13721.6 ORF73397 - 0.053 14.0 0.2 3.8 8.0 0.0 3.0 2 1 1 3 3 3 0 SecD export protein N-terminal TM region Sugar_tr PF00083.24 ORF62181 - 9.4e-48 163.2 8.4 3.3e-27 95.5 4.9 2.0 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF62181 - 3.3e-20 72.3 0.5 8.1e-20 71.0 0.0 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily Suf PF05843.14 ORF62181 - 0.058 13.4 0.4 0.078 12.9 0.4 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) NIF PF03031.18 ORF58021 - 9.1e-54 181.5 0.6 1.4e-53 180.8 0.6 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF1180 PF06679.12 ORF51730 - 0.031 14.7 0.3 0.062 13.7 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Baculo_11_kDa PF06143.11 ORF51730 - 0.039 13.5 2.1 0.08 12.5 1.4 1.8 2 0 0 2 2 2 0 Baculovirus 11 kDa family SieB PF14163.6 ORF51730 - 0.36 10.3 2.6 1.6 8.2 0.8 2.2 2 0 0 2 2 2 0 Super-infection exclusion protein B SK_channel PF03530.14 ORF51730 - 2.1 8.3 7.9 2.3 8.2 4.6 2.6 2 0 0 2 2 2 0 Calcium-activated SK potassium channel DUF3021 PF11457.8 ORF51730 - 9.8 6.5 9.6 0.17 12.2 1.4 2.2 3 1 0 3 3 3 0 Protein of unknown function (DUF3021) NIF PF03031.18 ORF4946 - 9.1e-54 181.5 0.6 1.4e-53 180.8 0.6 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Aa_trans PF01490.18 ORF45237 - 5.3e-25 88.0 19.8 8.6e-25 87.3 19.8 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein ETRAMP PF09716.10 ORF45237 - 0.012 15.6 0.2 0.062 13.4 0.0 2.3 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks31.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks31.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks31.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks31.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:11:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- C1_2 PF03107.16 NODE_63543_length_254_cov_757.990868_g55602_i0reverse_frame_2 - 0.011 16.0 0.1 0.013 15.8 0.1 1.2 1 0 0 1 1 1 0 C1 domain Melittin PF01372.17 NODE_63539_length_254_cov_2319.242009_g55598_i0forward_frame_2 - 3.2 7.9 5.5 9.2 6.4 0.5 2.4 2 0 0 2 2 2 0 Melittin ANATO PF01821.18 NODE_63538_length_254_cov_5334.127854_g55597_i0reverse_frame_3 - 0.28 12.1 7.2 10 7.1 6.1 2.7 2 1 0 2 2 2 0 Anaphylotoxin-like domain DUF2723 PF11028.8 NODE_63536_length_254_cov_70553.159817_g55595_i0reverse_frame_3 - 0.087 12.7 3.7 0.097 12.6 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) Brr6_like_C_C PF10104.9 NODE_63535_length_254_cov_70713.424658_g55594_i0forward_frame_2 - 2.2 8.1 5.6 2.7 7.8 5.6 1.1 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain GCS2 PF04107.13 NODE_63533_length_255_cov_0.881818_g55592_i0reverse_frame_2 - 0.13 11.6 1.0 0.17 11.2 1.0 1.2 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) HEPN-like_int PF18867.1 NODE_63531_length_255_cov_0.950000_g55590_i0reverse_frame_3 - 0.033 14.1 1.1 0.051 13.5 1.1 1.3 1 1 0 1 1 1 0 HEPN-like integron domain TssO PF17561.2 NODE_63531_length_255_cov_0.950000_g55590_i0forward_frame_3 - 0.0042 17.2 1.6 0.0049 17.0 1.6 1.1 1 0 0 1 1 1 1 Type VI secretion system, TssO Stathmin PF00836.19 NODE_63530_length_255_cov_1.009091_g55589_i0reverse_frame_3 - 0.049 13.6 0.0 0.058 13.4 0.0 1.1 1 0 0 1 1 1 0 Stathmin family DUF3119 PF11317.8 NODE_63529_length_255_cov_1.027273_g55588_i0forward_frame_3 - 0.077 13.3 0.1 0.084 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3119) IceA2 PF05862.11 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_3 - 0.15 12.0 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Helicobacter pylori IceA2 protein zf-C2H2_6 PF13912.6 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.00029 20.8 0.3 0.00046 20.1 0.3 1.4 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_4 PF13894.6 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.00073 20.2 1.7 0.0018 19.0 1.7 1.7 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.002 18.3 0.1 0.0037 17.5 0.1 1.5 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding GAGA PF09237.11 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.026 14.3 0.7 0.034 14.0 0.7 1.2 1 0 0 1 1 1 0 GAGA factor zf-ANAPC11 PF12861.7 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.026 14.6 1.9 1.5 8.9 0.1 2.1 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger FYVE PF01363.21 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.026 14.6 4.2 0.032 14.4 4.2 1.2 1 0 0 1 1 1 0 FYVE zinc finger zf-met PF12874.7 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.027 14.9 1.1 0.053 13.9 0.3 1.9 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Rad50_zn_hook PF04423.14 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.12 12.3 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif UBZ_FAAP20 PF15750.5 NODE_63520_length_255_cov_1.200000_g55579_i0reverse_frame_2 - 0.26 11.3 3.5 0.62 10.1 0.2 2.4 3 0 0 3 3 3 0 Ubiquitin-binding zinc-finger DUF108 PF01958.18 NODE_63520_length_255_cov_1.200000_g55579_i0forward_frame_3 - 0.027 14.9 0.2 0.036 14.4 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF108 LRR_4 PF12799.7 NODE_63518_length_255_cov_1.213636_g55577_i0forward_frame_2 - 1.6e-06 28.3 6.8 0.00014 22.2 1.6 2.5 1 1 2 3 3 3 3 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_63518_length_255_cov_1.213636_g55577_i0forward_frame_2 - 0.00019 21.5 3.5 0.1 13.2 0.2 3.4 2 1 0 2 2 2 2 Leucine Rich Repeat LRR_6 PF13516.6 NODE_63518_length_255_cov_1.213636_g55577_i0forward_frame_2 - 0.0002 21.2 7.3 0.016 15.2 0.2 3.9 4 1 0 4 4 4 2 Leucine Rich repeat LRR_8 PF13855.6 NODE_63518_length_255_cov_1.213636_g55577_i0forward_frame_2 - 0.00066 19.4 5.1 0.43 10.4 0.1 2.9 2 1 0 2 2 2 2 Leucine rich repeat PIN_12 PF16289.5 NODE_63514_length_255_cov_1.272727_g55573_i0forward_frame_3 - 0.021 15.3 0.2 0.022 15.2 0.2 1.0 1 0 0 1 1 1 0 PIN domain Glyoxalase_2 PF12681.7 NODE_63514_length_255_cov_1.272727_g55573_i0forward_frame_3 - 0.042 13.8 0.3 0.049 13.6 0.3 1.2 1 0 0 1 1 1 0 Glyoxalase-like domain DUF86 PF01934.17 NODE_63510_length_255_cov_1.359091_g55569_i0reverse_frame_3 - 0.033 14.0 0.0 0.038 13.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF86 DUF2897 PF11446.8 NODE_63509_length_255_cov_1.377273_g55568_i0reverse_frame_3 - 0.064 13.2 1.2 0.66 9.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2897) Ion_trans PF00520.31 NODE_63509_length_255_cov_1.377273_g55568_i0forward_frame_3 - 8.4e-12 44.8 3.7 9.7e-12 44.6 3.7 1.0 1 0 0 1 1 1 1 Ion transport protein DUF2393 PF09624.10 NODE_63509_length_255_cov_1.377273_g55568_i0forward_frame_3 - 0.092 12.7 0.4 0.11 12.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) DUF3592 PF12158.8 NODE_63509_length_255_cov_1.377273_g55568_i0forward_frame_3 - 0.31 11.1 0.6 0.41 10.7 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) Ten1 PF12658.7 NODE_63508_length_255_cov_1.381818_g55567_i0forward_frame_3 - 0.038 13.9 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Telomere capping, CST complex subunit TOH_N PF12549.8 NODE_63506_length_255_cov_1.431818_g55565_i0reverse_frame_2 - 0.12 12.2 1.5 0.12 12.2 1.5 2.0 2 0 0 2 2 2 0 Tyrosine hydroxylase N terminal DUF3854 PF12965.7 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.0021 18.1 1.3 0.0025 17.8 1.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3854) Stathmin PF00836.19 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.0064 16.5 6.0 0.0077 16.2 6.0 1.1 1 0 0 1 1 1 1 Stathmin family Syntaxin-6_N PF09177.11 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.0089 16.6 1.5 0.011 16.3 1.5 1.2 1 0 0 1 1 1 1 Syntaxin 6, N-terminal Translin PF01997.16 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.023 14.7 1.8 0.026 14.5 1.8 1.0 1 0 0 1 1 1 0 Translin family Histone_HNS PF00816.21 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.027 15.3 2.1 0.027 15.3 2.1 1.6 1 1 1 2 2 2 0 H-NS histone family Allexi_40kDa PF05549.11 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.044 13.3 1.4 0.047 13.2 1.4 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein AIG1 PF04548.16 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.089 12.1 3.0 0.48 9.7 3.0 1.8 1 1 0 1 1 1 0 AIG1 family CotJB PF12652.7 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.12 12.6 0.9 0.15 12.3 0.9 1.1 1 0 0 1 1 1 0 CotJB protein SlyX PF04102.12 NODE_63505_length_255_cov_1.431818_g55564_i0reverse_frame_3 - 0.45 11.2 3.9 2.3 8.9 1.5 2.1 1 1 1 2 2 2 0 SlyX NIF PF03031.18 NODE_63504_length_255_cov_1.440909_g55563_i0reverse_frame_3 - 7e-19 68.1 0.4 8.1e-19 67.9 0.4 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase CLIP_SPH_mas PF18398.1 NODE_63504_length_255_cov_1.440909_g55563_i0reverse_frame_2 - 0.0035 17.7 0.9 0.0035 17.7 0.9 2.4 4 1 0 4 4 4 1 Clip-domain serine protease homolog masquerade ABC_tran PF00005.27 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 7.1e-08 33.1 0.0 8.2e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 9.3e-06 25.6 0.1 1.1e-05 25.4 0.1 1.2 1 0 0 1 1 1 1 RsgA GTPase NACHT PF05729.12 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.00013 21.9 0.0 0.00017 21.6 0.0 1.1 1 0 0 1 1 1 1 NACHT domain cobW PF02492.19 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.00014 21.5 0.0 0.00018 21.2 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.001 18.7 0.0 0.0011 18.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0015 19.0 0.0 0.0016 18.9 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.002 18.2 0.1 0.0031 17.6 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Septin PF00735.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0025 17.1 0.0 0.0034 16.7 0.0 1.3 1 0 0 1 1 1 1 Septin AAA_29 PF13555.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0032 17.2 0.0 0.0043 16.8 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0034 17.5 0.1 0.0048 17.0 0.1 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain RNA_helicase PF00910.22 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0044 17.4 0.0 0.0062 16.9 0.0 1.3 1 0 0 1 1 1 1 RNA helicase T2SSE PF00437.20 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0044 16.1 0.0 0.0046 16.1 0.0 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein PIF1 PF05970.14 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.0056 15.9 0.0 0.0062 15.8 0.0 1.1 1 0 0 1 1 1 1 PIF1-like helicase Zeta_toxin PF06414.12 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.01 15.2 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin IstB_IS21 PF01695.17 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.014 15.1 0.0 0.016 15.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein Roc PF08477.13 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.014 15.6 0.0 0.021 15.1 0.0 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Rad17 PF03215.15 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.016 15.1 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain MobB PF03205.14 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.019 14.8 0.0 0.029 14.3 0.0 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.022 15.3 1.0 0.028 14.9 0.4 1.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.022 15.0 0.0 0.026 14.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.027 14.6 0.0 0.037 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.031 14.0 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.038 14.3 0.0 0.046 14.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.038 13.9 0.0 0.05 13.5 0.0 1.2 1 0 0 1 1 1 0 NTPase AAA_18 PF13238.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.041 14.4 0.0 0.065 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.042 13.9 0.0 0.047 13.7 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.047 13.2 0.0 0.05 13.1 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region PRK PF00485.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.053 13.2 0.0 0.069 12.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.059 13.3 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_24 PF13479.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.062 13.0 0.3 0.1 12.3 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_32 PF13654.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.084 11.6 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.085 12.7 0.0 0.094 12.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein PduV-EutP PF10662.9 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.093 12.5 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ATPase_2 PF01637.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.095 12.6 0.0 0.095 12.6 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Ploopntkinase1 PF18748.1 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.097 12.2 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase1 TrwB_AAD_bind PF10412.9 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.11 11.4 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ATP-synt_ab PF00006.25 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.11 12.1 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_28 PF13521.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.12 12.7 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.14 11.5 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family DUF2791 PF10923.8 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.14 11.0 0.0 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) AAA_35 PF14516.6 NODE_63497_length_255_cov_1.454545_g55556_i0reverse_frame_2 - 0.16 10.8 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain DUF4481 PF14800.6 NODE_63492_length_255_cov_1.531818_g55551_i0reverse_frame_2 - 0.015 14.8 0.3 0.018 14.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) zf-tcix PF14952.6 NODE_63491_length_255_cov_1.550000_g55550_i0forward_frame_2 - 0.1 12.3 3.7 0.47 10.1 1.7 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding DUF5439 PF17507.2 NODE_63490_length_255_cov_1.554545_g55549_i0forward_frame_3 - 0.15 12.3 0.1 0.29 11.4 0.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5439) SOCS_box PF07525.16 NODE_63490_length_255_cov_1.554545_g55549_i0forward_frame_2 - 0.16 12.4 1.0 0.22 11.9 0.7 1.5 1 1 0 1 1 1 0 SOCS box TMPIT PF07851.13 NODE_63487_length_255_cov_1.627273_g55546_i0forward_frame_3 - 0.031 13.5 3.0 0.031 13.5 3.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein DnaT PF17948.1 NODE_63486_length_255_cov_1.627273_g55545_i0reverse_frame_3 - 0.082 12.6 0.0 0.13 12.0 0.0 1.5 1 1 0 1 1 1 0 DnaT DNA-binding domain CcmD PF04995.14 NODE_63486_length_255_cov_1.627273_g55545_i0forward_frame_3 - 4.1 7.6 7.0 6.9 6.8 5.0 2.4 2 1 0 2 2 2 0 Heme exporter protein D (CcmD) DUF333 PF03891.15 NODE_63486_length_255_cov_1.627273_g55545_i0forward_frame_2 - 8.1e-20 70.8 0.1 1e-19 70.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF333) EGF_CA PF07645.15 NODE_63484_length_255_cov_1.663636_g55543_i0forward_frame_2 - 5.4 7.3 10.0 0.46 10.7 5.4 1.7 2 0 0 2 2 2 0 Calcium-binding EGF domain Cas9_PI PF16595.5 NODE_63482_length_255_cov_1.672727_g55541_i0reverse_frame_3 - 0.025 14.4 4.2 0.028 14.3 4.2 1.0 1 0 0 1 1 1 0 PAM-interacting domain of CRISPR-associated endonuclease Cas9 Fimbrial PF00419.20 NODE_63480_length_255_cov_1.727273_g55539_i0forward_frame_3 - 0.0013 19.0 0.2 0.0015 18.9 0.2 1.1 1 0 0 1 1 1 1 Fimbrial protein DUF4581 PF15167.6 NODE_63479_length_255_cov_1.731818_g55538_i0reverse_frame_3 - 0.17 12.1 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4581) ASTN_2_hairpin PF18577.1 NODE_63475_length_255_cov_1.777273_g55534_i0forward_frame_2 - 0.042 13.9 0.6 0.066 13.3 0.6 1.4 1 0 0 1 1 1 0 Astrotactin-2 C-terminal beta-hairpin domain DUF4885 PF16226.5 NODE_63472_length_255_cov_1.813636_g55531_i0reverse_frame_3 - 0.17 10.9 0.0 0.22 10.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4885) DUF809 PF05663.11 NODE_63472_length_255_cov_1.813636_g55531_i0forward_frame_3 - 0.39 10.9 3.0 0.43 10.7 3.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Glyco_transf_34 PF05637.12 NODE_63471_length_255_cov_1.818182_g55530_i0forward_frame_2 - 0.053 13.2 0.0 0.053 13.2 0.0 1.0 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family zn-ribbon_14 PF16503.5 NODE_63470_length_255_cov_1.818182_g55529_i0forward_frame_3 - 0.081 12.5 0.7 0.13 11.8 0.7 1.3 1 0 0 1 1 1 0 Zinc-ribbon DUF5320 PF17253.2 NODE_63470_length_255_cov_1.818182_g55529_i0forward_frame_3 - 0.21 12.6 3.4 0.27 12.3 3.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5320) Transglut_core3 PF13471.6 NODE_63470_length_255_cov_1.818182_g55529_i0forward_frame_2 - 0.48 10.3 5.2 0.56 10.1 5.2 1.2 1 0 0 1 1 1 0 Transglutaminase-like superfamily Ribosomal_L34 PF00468.17 NODE_63469_length_255_cov_1.822727_g55528_i0reverse_frame_3 - 0.2 11.7 0.2 0.2 11.7 0.2 1.8 2 0 0 2 2 2 0 Ribosomal protein L34 DUF3177 PF11375.8 NODE_63469_length_255_cov_1.822727_g55528_i0reverse_frame_2 - 0.017 14.9 2.1 0.019 14.7 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3177) CYSTM PF12734.7 NODE_63468_length_255_cov_1.831818_g55527_i0forward_frame_2 - 0.0094 16.3 0.2 0.056 13.8 0.0 2.1 2 0 0 2 2 2 1 Cysteine-rich TM module stress tolerance Imm65 PF15582.6 NODE_63467_length_255_cov_1.840909_g55526_i0reverse_frame_2 - 0.055 12.3 0.0 0.06 12.2 0.0 1.0 1 0 0 1 1 1 0 Immunity protein 65 ANAPC5 PF12862.7 NODE_63467_length_255_cov_1.840909_g55526_i0forward_frame_3 - 0.025 14.6 0.4 0.048 13.7 0.2 1.5 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 5 FAM76 PF16046.5 NODE_63466_length_255_cov_1.840909_g55525_i0forward_frame_2 - 0.074 12.4 4.8 0.077 12.3 4.8 1.1 1 0 0 1 1 1 0 FAM76 protein Tetraspanin PF00335.20 NODE_63464_length_255_cov_1.863636_g55523_i0reverse_frame_2 - 0.12 12.1 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF4957 PF16318.5 NODE_63463_length_255_cov_1.881818_g55522_i0reverse_frame_2 - 0.006 16.5 0.1 0.0065 16.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4957) DUF4711 PF15829.5 NODE_63455_length_255_cov_2.072727_g55514_i0reverse_frame_3 - 0.0022 18.0 0.4 0.0026 17.8 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4711) ANTAR PF03861.14 NODE_63449_length_255_cov_2.245455_g55508_i0forward_frame_2 - 0.042 13.7 0.9 0.063 13.1 0.9 1.3 1 0 0 1 1 1 0 ANTAR domain VSG_B PF13206.6 NODE_63449_length_255_cov_2.245455_g55508_i0forward_frame_2 - 0.055 12.7 0.1 0.062 12.6 0.1 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain Flg_hook PF02120.16 NODE_63449_length_255_cov_2.245455_g55508_i0forward_frame_2 - 0.12 12.3 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK DUF2357 PF09823.9 NODE_63446_length_255_cov_2.372727_g55505_i0forward_frame_3 - 0.0044 16.3 0.2 0.0053 16.0 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF2357) TetR_C_1 PF02909.17 NODE_63445_length_255_cov_2.400000_g55504_i0reverse_frame_2 - 1.4e-14 54.1 0.1 1.5e-14 54.1 0.1 1.0 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain UPF0561 PF10573.9 NODE_63443_length_255_cov_2.404545_g55502_i0reverse_frame_2 - 0.017 15.3 1.4 0.019 15.1 1.4 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0561 YcxB PF14317.6 NODE_63442_length_255_cov_2.445455_g55501_i0forward_frame_3 - 0.051 13.3 0.0 0.067 12.9 0.0 1.2 1 0 0 1 1 1 0 YcxB-like protein RuvC_1 PF18516.1 NODE_63442_length_255_cov_2.445455_g55501_i0forward_frame_2 - 0.16 11.1 0.0 0.19 10.9 0.0 1.0 1 0 0 1 1 1 0 RuvC nuclease domain DUF4083 PF13314.6 NODE_63438_length_255_cov_2.481818_g55497_i0forward_frame_2 - 0.62 10.0 6.4 0.9 9.5 2.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) DUF4024 PF13216.6 NODE_63437_length_255_cov_2.481818_g55496_i0reverse_frame_3 - 4.5 7.3 9.9 0.7 9.9 5.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4024) DUF2934 PF11154.8 NODE_63436_length_255_cov_2.495455_g55495_i0forward_frame_2 - 1.6 8.4 4.7 12 5.7 0.2 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2934) DUF3344 PF11824.8 NODE_63436_length_255_cov_2.495455_g55495_i0forward_frame_2 - 3.7 7.1 6.0 8.6 5.9 1.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3344) CNH PF00780.22 NODE_63434_length_255_cov_2.709091_g55493_i0reverse_frame_2 - 0.029 14.0 0.1 0.029 14.0 0.1 1.0 1 0 0 1 1 1 0 CNH domain Acyl_transf_3 PF01757.22 NODE_63434_length_255_cov_2.709091_g55493_i0forward_frame_2 - 0.00076 18.6 4.6 0.00081 18.6 4.6 1.1 1 0 0 1 1 1 1 Acyltransferase family SLATT_4 PF18186.1 NODE_63431_length_255_cov_2.950000_g55490_i0forward_frame_2 - 0.0031 17.2 1.2 0.0038 16.9 1.2 1.0 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 4 Choline_kin_N PF04428.14 NODE_63430_length_255_cov_3.059091_g55489_i0reverse_frame_3 - 0.18 11.5 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 Choline kinase N terminus DUF4118 PF13493.6 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_3 - 0.056 13.3 0.0 0.063 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) Rootletin PF15035.6 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.0019 18.3 1.6 0.0022 18.0 1.6 1.1 1 0 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion Cytochrom_C_2 PF01322.20 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.02 15.8 0.2 0.024 15.5 0.2 1.0 1 0 0 1 1 1 0 Cytochrome C' MIP-T3_C PF17749.1 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.027 14.4 2.9 0.037 14.0 2.8 1.2 1 1 0 1 1 1 0 Microtubule-binding protein MIP-T3 C-terminal region Lipoprotein_20 PF13942.6 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.027 14.4 4.2 0.043 13.7 2.4 1.9 1 1 1 2 2 2 0 YfhG lipoprotein Laminin_II PF06009.12 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.057 13.4 2.3 0.079 13.0 2.3 1.3 1 1 0 1 1 1 0 Laminin Domain II Med9 PF07544.13 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.061 13.4 2.0 2.3 8.4 0.2 2.0 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF1664 PF07889.12 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.11 12.6 3.1 0.21 11.6 3.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.24 11.6 3.0 0.31 11.2 3.0 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Synaptobrevin PF00957.21 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.25 11.2 2.9 0.17 11.7 1.4 1.5 2 0 0 2 2 2 0 Synaptobrevin ThylakoidFormat PF11264.8 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.31 10.7 3.5 0.37 10.4 2.8 1.4 1 1 1 2 2 2 0 Thylakoid formation protein FAM76 PF16046.5 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 0.63 9.3 4.2 0.7 9.2 4.2 1.0 1 0 0 1 1 1 0 FAM76 protein YtxH PF12732.7 NODE_63429_length_255_cov_3.122727_g55488_i0reverse_frame_2 - 3.4 8.3 6.3 2.2 8.8 4.8 1.5 2 0 0 2 2 2 0 YtxH-like protein HHH_6 PF14579.6 NODE_63428_length_255_cov_3.172727_g55487_i0forward_frame_2 - 0.0083 16.4 0.0 0.0092 16.2 0.0 1.1 1 0 0 1 1 1 1 Helix-hairpin-helix motif Peptidase_S49_N PF08496.10 NODE_63425_length_255_cov_3.304545_g55484_i0forward_frame_3 - 0.11 12.5 5.7 0.13 12.3 5.7 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF4519 PF15012.6 NODE_63425_length_255_cov_3.304545_g55484_i0forward_frame_3 - 5.8 7.2 8.9 10 6.4 8.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) AP3D1 PF06375.11 NODE_63425_length_255_cov_3.304545_g55484_i0forward_frame_3 - 7.4 6.8 12.0 9 6.5 12.0 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 BLI1 PF17324.2 NODE_63425_length_255_cov_3.304545_g55484_i0forward_frame_2 - 0.068 13.8 1.7 0.085 13.5 1.7 1.2 1 0 0 1 1 1 0 BLOC-1 interactor 1 MFS_1 PF07690.16 NODE_63422_length_255_cov_3.386364_g55481_i0reverse_frame_2 - 1.5e-05 24.1 0.0 1.6e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_63422_length_255_cov_3.386364_g55481_i0reverse_frame_2 - 0.00071 18.6 0.1 0.00077 18.4 0.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Carb_kinase PF01256.17 NODE_63421_length_255_cov_3.450000_g55480_i0reverse_frame_3 - 1.6e-25 90.0 0.0 1.7e-25 89.9 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate kinase PGBA_C PF15437.6 NODE_63420_length_255_cov_3.536364_g55479_i0reverse_frame_2 - 0.021 15.2 0.6 0.026 14.9 0.6 1.2 1 0 0 1 1 1 0 Plasminogen-binding protein pgbA C-terminal SBP56 PF05694.11 NODE_63419_length_255_cov_3.563636_g55478_i0reverse_frame_2 - 0.8 8.5 2.1 0.94 8.2 2.1 1.1 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) O-antigen_lig PF13425.6 NODE_63418_length_255_cov_3.904545_g55477_i0reverse_frame_3 - 0.35 9.6 2.9 0.38 9.5 2.9 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF2678 PF10856.8 NODE_63418_length_255_cov_3.904545_g55477_i0forward_frame_2 - 3.5 7.6 11.4 5.5 6.9 11.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2678) HPD PF05044.12 NODE_63416_length_255_cov_4.727273_g55475_i0forward_frame_2 - 0.065 13.1 4.1 0.078 12.8 4.1 1.0 1 0 0 1 1 1 0 Homeo-prospero domain AIB PF15334.6 NODE_63415_length_255_cov_4.736364_g55474_i0reverse_frame_2 - 0.14 11.4 0.2 0.14 11.4 0.2 1.1 1 0 0 1 1 1 0 Aurora kinase A and ninein interacting protein TIP41 PF04176.13 NODE_63413_length_255_cov_14.150000_g55472_i0forward_frame_3 - 0.19 11.2 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 TIP41-like family TTL PF03133.15 NODE_63411_length_255_cov_25.022727_g55470_i0forward_frame_3 - 1.2e-11 44.3 0.0 1.5e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Dala_Dala_lig_C PF07478.13 NODE_63411_length_255_cov_25.022727_g55470_i0forward_frame_3 - 0.024 14.2 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus ATPgrasp_YheCD PF14398.6 NODE_63411_length_255_cov_25.022727_g55470_i0forward_frame_3 - 0.046 12.9 0.0 0.062 12.5 0.0 1.1 1 0 0 1 1 1 0 YheC/D like ATP-grasp PPTA PF01239.22 NODE_63410_length_255_cov_30.286364_g55469_i0forward_frame_2 - 0.011 15.5 0.2 0.028 14.1 0.2 1.7 1 0 0 1 1 1 0 Protein prenyltransferase alpha subunit repeat zf-C6H2 PF15801.5 NODE_63408_length_255_cov_39.490909_g55467_i0reverse_frame_2 - 0.037 14.3 6.6 0.037 14.3 6.6 2.0 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding E1_UFD PF09358.10 NODE_63406_length_255_cov_48.345455_g55465_i0forward_frame_2 - 0.058 14.1 0.4 0.061 14.0 0.4 1.2 1 0 0 1 1 1 0 Ubiquitin fold domain YhfC PF10086.9 NODE_63404_length_255_cov_50.518182_g55463_i0reverse_frame_3 - 0.0071 15.7 0.0 0.0075 15.7 0.0 1.0 1 0 0 1 1 1 1 YhfC intramembrane metalloprotease Importin_rep_2 PF18786.1 NODE_63403_length_255_cov_51.250000_g55462_i0forward_frame_2 - 0.052 13.4 0.0 0.075 12.9 0.0 1.3 1 0 0 1 1 1 0 Importin 13 repeat DUF237 PF03072.14 NODE_63402_length_255_cov_51.763636_g55461_i0forward_frame_2 - 0.055 13.5 0.2 0.06 13.4 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF237) Ank_5 PF13857.6 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 2.3e-13 50.1 0.7 5.7e-08 32.9 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 2.5e-11 43.5 0.4 3.2e-07 30.5 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 3.1e-10 40.5 0.1 5e-10 39.8 0.1 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 4.8e-06 27.0 0.0 6.5e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_63400_length_255_cov_53.940909_g55459_i0reverse_frame_2 - 4.3e-05 23.6 0.0 0.00041 20.6 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeat COMM_domain PF07258.14 NODE_63399_length_255_cov_53.972727_g55458_i0reverse_frame_3 - 0.0082 16.2 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 1 COMM domain Aida_N PF08910.10 NODE_63398_length_255_cov_57.618182_g55457_i0reverse_frame_2 - 0.49 10.8 4.3 1.5 9.3 3.9 1.7 1 1 1 2 2 2 0 Aida N-terminus RINGv PF12906.7 NODE_63396_length_255_cov_64.954545_g55455_i0forward_frame_3 - 0.002 18.2 1.0 0.002 18.2 1.0 2.2 1 1 1 2 2 2 1 RING-variant domain TadE PF07811.12 NODE_63394_length_255_cov_68.227273_g55453_i0forward_frame_2 - 1.8 8.9 6.9 4.3 7.7 6.9 1.7 1 1 0 1 1 1 0 TadE-like protein DUF1673 PF07895.11 NODE_63394_length_255_cov_68.227273_g55453_i0forward_frame_2 - 3.1 7.4 7.8 3.8 7.1 7.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) zf-LYAR PF08790.11 NODE_63392_length_255_cov_78.890909_g55451_i0forward_frame_2 - 8 6.5 9.8 7.6 6.5 2.2 2.8 2 1 1 3 3 3 0 LYAR-type C2HC zinc finger Cys_rich_KTR PF14205.6 NODE_63390_length_255_cov_83.686364_g55449_i0forward_frame_2 - 0.0026 17.5 0.3 0.13 12.1 0.1 2.1 2 0 0 2 2 2 2 Cysteine-rich KTR DZR PF12773.7 NODE_63390_length_255_cov_83.686364_g55449_i0forward_frame_2 - 0.0075 16.3 1.2 0.017 15.2 1.2 1.5 1 1 0 1 1 1 1 Double zinc ribbon DUF1247 PF06851.11 NODE_63386_length_255_cov_100.427273_g55445_i0reverse_frame_2 - 0.043 13.8 0.2 0.045 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) DUF2797 PF10977.8 NODE_63383_length_255_cov_118.345455_g55442_i0forward_frame_2 - 0.37 10.6 9.5 0.38 10.6 9.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) zf-RanBP PF00641.18 NODE_63383_length_255_cov_118.345455_g55442_i0forward_frame_2 - 5.9 6.3 17.8 2.4 7.6 6.9 2.5 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Ca_hom_mod PF14798.6 NODE_63382_length_255_cov_119.795455_g55441_i0forward_frame_2 - 0.044 12.9 0.1 0.055 12.6 0.1 1.1 1 0 0 1 1 1 0 Calcium homeostasis modulator zf-ANAPC11 PF12861.7 NODE_63381_length_255_cov_124.822727_g55440_i0forward_frame_3 - 0.0038 17.2 0.0 0.0048 16.9 0.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Imm35 PF15567.6 NODE_63381_length_255_cov_124.822727_g55440_i0forward_frame_3 - 0.13 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 35 YrvL PF14184.6 NODE_63380_length_255_cov_127.318182_g55439_i0reverse_frame_3 - 0.0064 16.6 0.0 0.0068 16.5 0.0 1.0 1 0 0 1 1 1 1 Regulatory protein YrvL AceK PF06315.11 NODE_63376_length_255_cov_139.618182_g55435_i0forward_frame_3 - 0.11 11.0 0.1 0.12 10.9 0.1 1.0 1 0 0 1 1 1 0 Isocitrate dehydrogenase kinase/phosphatase (AceK) SLM4 PF16818.5 NODE_63375_length_255_cov_141.981818_g55434_i0reverse_frame_3 - 0.0017 18.3 0.8 0.0018 18.3 0.8 1.1 1 0 0 1 1 1 1 Protein SLM4 HcyBio PF01837.16 NODE_63375_length_255_cov_141.981818_g55434_i0reverse_frame_2 - 0.2 10.4 0.7 0.22 10.3 0.7 1.1 1 0 0 1 1 1 0 Homocysteine biosynthesis enzyme, sulfur-incorporation Keratin_matx PF04579.12 NODE_63371_length_255_cov_175.659091_g55430_i0reverse_frame_2 - 0.017 15.4 2.3 0.027 14.8 2.3 1.3 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein Stealth_CR1 PF17101.5 NODE_63371_length_255_cov_175.659091_g55430_i0forward_frame_3 - 0.32 10.8 0.8 1.6 8.6 0.2 2.0 2 0 0 2 2 2 0 Stealth protein CR1, conserved region 1 DUF1856 PF08983.10 NODE_63369_length_255_cov_191.436364_g55428_i0reverse_frame_3 - 0.46 10.7 4.7 0.44 10.8 3.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF1856) DUF4033 PF13225.6 NODE_63368_length_255_cov_226.936364_g55427_i0reverse_frame_2 - 0.019 14.9 2.6 0.024 14.6 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) IGF2_C PF08365.11 NODE_63366_length_255_cov_286.500000_g55425_i0forward_frame_3 - 0.17 11.9 1.8 0.24 11.5 1.8 1.2 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide Acyl_transf_3 PF01757.22 NODE_63364_length_255_cov_343.686364_g55423_i0reverse_frame_3 - 0.05 12.7 0.0 0.051 12.6 0.0 1.0 1 0 0 1 1 1 0 Acyltransferase family DUF35_N PF12172.8 NODE_63363_length_255_cov_361.331818_g55422_i0forward_frame_3 - 6.5e-05 22.7 0.8 0.00011 22.0 0.8 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) FliW PF02623.15 NODE_63363_length_255_cov_361.331818_g55422_i0forward_frame_3 - 0.24 11.3 0.0 0.28 11.1 0.0 1.1 1 0 0 1 1 1 0 FliW protein Ependymin PF00811.18 NODE_63362_length_255_cov_548.772727_g55421_i0reverse_frame_2 - 0.027 14.7 0.2 0.038 14.3 0.2 1.2 1 0 0 1 1 1 0 Ependymin zf-C2H2 PF00096.26 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 2.3e-13 49.8 5.8 3.8e-07 30.2 2.1 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 3.1e-09 36.9 4.8 0.0002 21.9 1.1 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 3.2e-08 33.6 3.6 1.2e-05 25.5 0.2 2.4 2 0 0 2 2 2 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 7.7e-08 32.0 2.5 7.7e-08 32.0 2.5 2.2 2 0 0 2 2 2 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 1.5e-05 25.2 0.3 1.6e-05 25.1 0.3 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.0014 18.4 0.1 0.003 17.3 0.1 1.5 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.0086 16.1 2.0 0.0086 16.1 2.0 2.3 2 1 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_2 PF12756.7 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.018 15.4 2.3 0.026 14.8 0.9 1.8 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-met PF12874.7 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.18 12.3 3.4 1.3 9.5 1.1 3.0 2 2 0 2 2 2 0 Zinc-finger of C2H2 type zf-BED PF02892.15 NODE_63360_length_255_cov_894.072727_g55419_i0reverse_frame_3 - 0.42 10.7 3.9 0.2 11.7 0.7 1.9 1 1 1 2 2 2 0 BED zinc finger Chloroa_b-bind PF00504.21 NODE_63359_length_255_cov_4286.745455_g55418_i0reverse_frame_3 - 6.3e-08 33.3 0.4 6.8e-08 33.2 0.4 1.3 1 1 0 1 1 1 1 Chlorophyll A-B binding protein AXE1 PF05448.12 NODE_63359_length_255_cov_4286.745455_g55418_i0forward_frame_3 - 0.19 10.4 0.0 0.22 10.1 0.0 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Merozoite_SPAM PF07133.11 ORF98370 - 0.0026 17.8 0.2 0.0029 17.6 0.2 1.0 1 0 0 1 1 1 1 Merozoite surface protein (SPAM) Orthoreo_P10 PF07204.11 ORF97946 - 0.022 14.7 0.2 0.025 14.5 0.2 1.2 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 FeoB_associated PF12669.7 ORF9736 - 0.056 13.8 0.4 0.093 13.1 0.4 1.3 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Rrp44_S1 PF17215.3 ORF97214 - 0.043 13.8 0.0 0.046 13.7 0.0 1.1 1 0 0 1 1 1 0 S1 domain Corona_NS8 PF12093.8 ORF97184 - 0.04 14.5 0.0 0.046 14.3 0.0 1.1 1 0 0 1 1 1 0 Coronavirus NS8 protein Zn_ribbon_SprT PF17283.2 ORF97079 - 0.005 16.7 1.7 0.011 15.7 1.7 1.6 1 0 0 1 1 1 1 SprT-like zinc ribbon domain Elf1 PF05129.13 ORF97079 - 0.073 13.1 1.1 0.11 12.6 1.1 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like BCMA-Tall_bind PF09257.10 ORF95671 - 0.0048 17.0 1.4 0.15 12.2 0.2 2.4 3 0 0 3 3 3 2 BCMA, TALL-1 binding Pox_A14 PF05767.12 ORF95573 - 3 8.1 9.0 3.8 7.7 0.6 2.1 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 Arg_tRNA_synt_N PF03485.16 ORF95519 - 0.0032 18.0 0.0 0.0038 17.8 0.0 1.2 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain RIIa PF02197.17 ORF9482 - 0.14 11.8 1.3 0.2 11.4 0.0 1.9 2 0 0 2 2 2 0 Regulatory subunit of type II PKA R-subunit 2TM PF13239.6 ORF92452 - 0.12 12.7 2.5 0.16 12.3 2.5 1.2 1 0 0 1 1 1 0 2TM domain KNOX2 PF03791.13 ORF92133 - 0.11 12.0 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 KNOX2 domain Cyt-b5 PF00173.28 ORF91906 - 6.2e-23 80.7 0.1 7.2e-23 80.5 0.1 1.0 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain CD52 PF15116.6 ORF91622 - 0.0035 17.3 1.3 0.0069 16.4 1.3 1.5 1 0 0 1 1 1 1 CAMPATH-1 antigen Bestrophin PF01062.21 ORF90608 - 0.13 11.7 4.9 0.13 11.6 4.9 1.0 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel EVI2A PF05399.11 ORF90608 - 7.9 6.0 5.6 2 7.9 3.3 1.3 1 1 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) DUF2838 PF10998.8 ORF90305 - 1.4 9.2 7.8 4.6 7.5 3.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2838) PhoLip_ATPase_C PF16212.5 ORF85081 - 0.044 13.5 0.9 0.046 13.5 0.1 1.4 2 0 0 2 2 2 0 Phospholipid-translocating P-type ATPase C-terminal FlhE PF06366.13 ORF84252 - 0.073 13.1 0.9 0.089 12.8 0.9 1.2 1 0 0 1 1 1 0 Flagellar protein FlhE HATPase_c PF02518.26 ORF8351 - 0.014 15.9 0.1 0.025 15.1 0.1 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Phage_TAC_4 PF08748.11 ORF8351 - 0.032 14.5 0.0 0.036 14.4 0.0 1.1 1 0 0 1 1 1 0 Phage tail assembly chaperone MatE PF01554.18 ORF83391 - 0.022 14.4 0.0 0.029 14.0 0.0 1.1 1 0 0 1 1 1 0 MatE Csm1_N PF18504.1 ORF82996 - 0.00074 19.8 0.7 0.0015 18.8 0.6 1.6 1 1 0 1 1 1 1 Csm1 N-terminal domain Troponin PF00992.20 ORF82996 - 0.0043 17.4 2.5 0.005 17.1 2.5 1.2 1 0 0 1 1 1 1 Troponin ATG16 PF08614.11 ORF82996 - 0.011 15.9 10.9 0.012 15.8 10.9 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) ADIP PF11559.8 ORF82996 - 0.012 15.8 5.2 0.012 15.8 5.2 1.3 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 ORF82996 - 0.02 14.2 8.1 0.02 14.2 8.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Cluap1 PF10234.9 ORF82996 - 0.021 14.2 6.5 0.024 14.1 6.5 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 Spc42p PF11544.8 ORF82996 - 0.022 14.7 0.1 0.037 14.0 0.1 1.5 1 0 0 1 1 1 0 Spindle pole body component Spc42p PI3K_P85_iSH2 PF16454.5 ORF82996 - 0.025 14.2 4.5 0.026 14.1 4.5 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain CENP-Q PF13094.6 ORF82996 - 0.053 13.7 5.9 0.038 14.2 4.0 1.6 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit HALZ PF02183.18 ORF82996 - 0.09 13.0 4.1 0.11 12.8 0.5 2.5 2 2 0 2 2 2 0 Homeobox associated leucine zipper JIP_LZII PF16471.5 ORF82996 - 0.15 12.3 3.1 0.18 12.0 2.5 1.5 1 1 0 1 1 1 0 JNK-interacting protein leucine zipper II DUF2458 PF10454.9 ORF82996 - 0.2 11.3 5.8 0.28 10.8 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2458) DivIC PF04977.15 ORF82996 - 1.8 8.4 6.3 0.34 10.7 2.1 1.9 1 1 1 2 2 2 0 Septum formation initiator TFIIB_C_1 PF18542.1 ORF82882 - 0.11 12.5 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 Bul1_C PF04426.12 ORF81245 - 0.027 13.9 0.2 0.027 13.9 0.2 1.1 1 0 0 1 1 1 0 Bul1 C terminus Tenui_NS3 PF05310.12 ORF80855 - 0.071 13.2 0.0 0.083 13.0 0.0 1.0 1 0 0 1 1 1 0 Tenuivirus movement protein CCER1 PF15482.6 ORF79253 - 0.0086 16.0 3.5 0.0098 15.8 3.5 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing glutamate-rich protein family 1 SLC3A2_N PF16028.5 ORF79139 - 0.1 12.1 1.2 0.13 11.8 1.2 1.4 1 1 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Glyoxalase_2 PF12681.7 ORF77549 - 0.1 12.5 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Glyoxalase-like domain fn2 PF00040.19 ORF77549 - 0.19 12.0 0.9 0.3 11.4 0.9 1.3 1 0 0 1 1 1 0 Fibronectin type II domain GAGA PF09237.11 ORF77185 - 3.4 7.5 5.6 24 4.8 5.6 2.2 1 1 0 1 1 1 0 GAGA factor zf-rbx1 PF12678.7 ORF76549 - 1.2e-07 31.9 5.4 1.2e-07 31.9 5.4 1.8 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF76549 - 1.6e-07 31.6 5.4 2.7e-07 30.8 5.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF76549 - 7.7e-06 25.7 4.3 1.4e-05 24.8 4.3 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF76549 - 4.9e-05 23.3 1.2 7.2e-05 22.8 1.2 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF76549 - 0.00035 20.4 3.8 0.00035 20.4 3.8 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF76549 - 0.00043 20.1 2.0 0.00069 19.4 2.0 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF76549 - 0.00071 19.5 1.7 0.0013 18.6 1.7 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF76549 - 0.00092 19.2 2.4 0.00092 19.2 2.4 2.2 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF76549 - 0.0023 17.7 1.0 0.0035 17.2 1.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Tmpp129 PF10272.9 ORF76549 - 0.0035 16.7 1.4 0.0052 16.1 1.4 1.3 1 0 0 1 1 1 1 Putative transmembrane protein precursor Zn_ribbon_17 PF17120.5 ORF76549 - 0.0064 16.1 4.0 0.0073 15.9 2.8 1.7 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF76549 - 0.04 13.7 3.4 0.04 13.7 3.4 2.1 2 0 0 2 2 2 0 RING-like zinc finger RINGv PF12906.7 ORF76549 - 0.09 12.9 3.7 0.19 11.9 3.7 1.5 1 0 0 1 1 1 0 RING-variant domain Prok-RING_1 PF14446.6 ORF76549 - 0.15 12.0 2.2 0.44 10.5 0.2 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 FANCL_C PF11793.8 ORF76549 - 0.17 12.1 4.9 2.6 8.3 4.2 2.4 1 1 0 1 1 1 0 FANCL C-terminal domain zf-Di19 PF05605.12 ORF76549 - 0.17 12.2 5.3 0.32 11.3 0.4 2.6 2 1 1 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding FA_hydroxylase PF04116.13 ORF76536 - 0.041 14.2 1.4 0.044 14.1 1.4 1.1 1 0 0 1 1 1 0 Fatty acid hydroxylase superfamily Nudc_N PF14050.6 ORF76536 - 0.061 13.3 0.1 0.079 13.0 0.1 1.2 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. HemY_N PF07219.13 ORF75813 - 0.2 11.9 0.2 0.31 11.2 0.2 1.3 1 0 0 1 1 1 0 HemY protein N-terminus Tetraspanin PF00335.20 ORF7581 - 0.02 14.6 1.3 0.023 14.4 1.3 1.0 1 0 0 1 1 1 0 Tetraspanin family GDP_Man_Dehyd PF16363.5 ORF7576 - 0.13 11.6 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase FAD_binding_3 PF01494.19 ORF75389 - 0.062 12.5 0.0 0.074 12.3 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain Nop10p PF04135.12 ORF74818 - 0.09 12.8 1.0 0.14 12.2 1.0 1.3 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family SNRNP27 PF08648.12 ORF74770 - 0.13 12.4 5.6 0.12 12.5 2.9 2.0 1 1 1 2 2 2 0 U4/U6.U5 small nuclear ribonucleoproteins Sporozoite_P67 PF05642.11 ORF74264 - 0.36 8.9 3.2 0.41 8.7 3.2 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF5398 PF17376.2 ORF74008 - 0.00075 20.1 0.2 0.001 19.6 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5398) UPF0449 PF15136.6 ORF74008 - 0.024 15.1 0.2 0.027 14.9 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 DUF1934 PF09148.10 ORF73123 - 0.1 12.6 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1934) Prot_inhib_II PF02428.15 ORF72452 - 0.037 14.5 3.2 0.037 14.5 3.2 1.8 2 1 0 2 2 2 0 Potato type II proteinase inhibitor family DUF4603 PF15376.6 ORF72051 - 0.56 7.5 2.4 0.6 7.4 2.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) Cas_St_Csn2 PF16813.5 ORF71800 - 0.0041 16.3 0.3 0.0048 16.1 0.3 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Csn2 subfamily St NES_C_h PF18208.1 ORF71800 - 0.024 14.9 0.3 0.037 14.3 0.2 1.4 1 1 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain DUF1324 PF07038.11 ORF7162 - 0.065 13.5 0.0 0.09 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1324) HARP PF07443.13 ORF7162 - 0.11 12.2 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 HepA-related protein (HARP) TauD PF02668.16 ORF70331 - 1.1e-08 35.3 0.1 1.2e-08 35.1 0.1 1.1 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family CsiD PF08943.10 ORF70331 - 0.0028 16.8 0.0 0.0033 16.6 0.0 1.0 1 0 0 1 1 1 1 CsiD NADHdh PF00146.21 ORF70310 - 4.1e-05 23.0 8.4 4.3e-05 23.0 8.4 1.1 1 0 0 1 1 1 1 NADH dehydrogenase UbiA PF01040.18 ORF68742 - 0.02 14.2 2.6 0.022 14.1 2.6 1.0 1 0 0 1 1 1 0 UbiA prenyltransferase family DUF4131 PF13567.6 ORF68742 - 0.043 13.5 8.9 0.052 13.2 8.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) TMEM154 PF15102.6 ORF68742 - 0.1 12.5 0.5 0.12 12.3 0.5 1.1 1 0 0 1 1 1 0 TMEM154 protein family TetR_C_12 PF16914.5 ORF68423 - 0.062 13.4 0.0 0.076 13.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial transcriptional repressor C-terminal SH2_2 PF14633.6 ORF68423 - 0.18 11.2 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 SH2 domain Phage_Capsid_P3 PF09018.11 ORF68411 - 0.13 11.0 5.0 0.15 10.9 5.0 1.0 1 0 0 1 1 1 0 P3 major capsid protein SCHIP-1 PF10148.9 ORF68411 - 2 8.0 9.4 2.2 7.8 9.4 1.1 1 0 0 1 1 1 0 Schwannomin-interacting protein 1 DUF4750 PF15938.5 ORF68320 - 0.085 12.5 5.4 0.14 11.8 5.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4750) Vac7 PF12751.7 ORF68320 - 2.4 7.5 3.2 2.5 7.5 3.2 1.0 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 Myotoxins PF00819.17 ORF65775 - 0.043 14.1 0.4 0.066 13.5 0.4 1.2 1 0 0 1 1 1 0 Myotoxin, crotamine RIIa PF02197.17 ORF65719 - 0.11 12.1 0.1 0.31 10.7 0.0 1.7 2 0 0 2 2 2 0 Regulatory subunit of type II PKA R-subunit SLC3A2_N PF16028.5 ORF64895 - 0.1 12.1 1.2 0.13 11.8 1.2 1.4 1 1 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Ezh2_MCSS PF18600.1 ORF64643 - 0.12 12.0 0.5 0.12 12.0 0.5 2.2 2 0 0 2 2 2 0 MCSS domain zf-TFIIB PF13453.6 ORF64190 - 0.018 14.4 0.6 0.031 13.6 0.6 1.4 1 0 0 1 1 1 0 Transcription factor zinc-finger Rtt106_N PF18215.1 ORF63856 - 0.065 13.0 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain DUF3678 PF12435.8 ORF62232 - 2.8 7.4 10.6 5.9 6.4 10.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) PDDEXK_9 PF08011.11 ORF62046 - 0.053 13.4 0.5 0.07 13.0 0.5 1.4 1 1 0 1 1 1 0 PD-(D/E)XK nuclease superfamily DUF5494 PF17598.2 ORF62046 - 0.098 12.8 1.2 0.11 12.7 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5494) DUF4337 PF14235.6 ORF62046 - 0.23 11.6 2.2 0.23 11.6 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Ribosomal_S17 PF00366.20 ORF618 - 1.6e-34 117.8 1.2 1.9e-34 117.6 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Baculo_E56 PF04639.12 ORF61608 - 0.11 11.7 1.2 0.12 11.6 1.2 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope Corona_NS8 PF12093.8 ORF61602 - 0.04 14.5 0.0 0.046 14.3 0.0 1.1 1 0 0 1 1 1 0 Coronavirus NS8 protein DUF3678 PF12435.8 ORF61175 - 2.8 7.4 10.6 5.9 6.4 10.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) LYRIC PF15686.5 ORF61158 - 0.42 10.1 12.1 0.44 10.0 12.1 1.1 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family RRM_1 PF00076.22 ORF61069 - 0.085 12.7 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF2735 PF10931.8 ORF6076 - 0.0058 17.3 0.4 0.013 16.1 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2735) DUF3475 PF11961.8 ORF6064 - 0.02 15.0 0.2 0.035 14.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3475) DUF2572 PF10833.8 ORF6064 - 0.079 12.7 2.2 0.088 12.6 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2572) MitoNEET_N PF10660.9 ORF60474 - 4.3 7.4 7.1 6.2 6.9 1.1 2.2 2 0 0 2 2 2 0 Iron-containing outer mitochondrial membrane protein N-terminus JTB PF05439.12 ORF60474 - 7.6 6.6 9.2 0.62 10.1 0.6 2.0 1 1 1 2 2 2 0 Jumping translocation breakpoint protein (JTB) Hydantoinase_B PF02538.14 ORF60320 - 0.1 11.0 0.0 0.12 10.8 0.0 1.0 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase CD52 PF15116.6 ORF59606 - 0.0035 17.3 1.3 0.0069 16.4 1.3 1.5 1 0 0 1 1 1 1 CAMPATH-1 antigen AUDH_Cupin PF18637.1 ORF58741 - 0.062 13.3 0.8 0.069 13.2 0.6 1.3 1 1 0 1 1 1 0 Aldos-2-ulose dehydratase/isomerase (AUDH) Cupin domain Suc_Fer-like PF06999.12 ORF58660 - 0.032 14.1 1.1 0.033 14.1 1.1 1.1 1 0 0 1 1 1 0 Sucrase/ferredoxin-like Gpr1_Fun34_YaaH PF01184.19 ORF58207 - 0.0067 16.0 3.2 0.0075 15.9 3.2 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DEC-1_N PF04625.13 ORF58153 - 0.015 14.3 0.7 0.015 14.3 0.7 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Uteroglobin PF01099.17 ORF58022 - 0.054 13.8 2.0 0.076 13.4 0.2 1.9 2 0 0 2 2 2 0 Uteroglobin family zf-CCHH PF10283.9 ORF57229 - 0.17 11.9 1.0 0.34 11.0 1.0 1.5 1 0 0 1 1 1 0 PBZ domain DUF1730 PF08331.10 ORF55642 - 0.1 12.6 0.1 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1730) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks320.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks320.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks320.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks320.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:18:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UL141 PF16758.5 ORF53705 - 0.054 13.2 0.0 0.057 13.1 0.0 1.1 1 0 0 1 1 1 0 Herpes-like virus membrane glycoprotein UL141 DUF3475 PF11961.8 ORF53267 - 0.018 15.1 0.2 0.031 14.3 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3475) HigB_toxin PF09907.9 ORF53244 - 0.019 15.2 2.9 0.12 12.6 0.6 2.2 1 1 1 2 2 2 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system MIP PF00230.20 ORF52374 - 0.0017 18.1 0.4 0.0028 17.4 0.4 1.4 1 1 0 1 1 1 1 Major intrinsic protein RecR PF02132.15 ORF51680 - 0.017 14.6 0.8 0.017 14.6 0.8 2.0 2 0 0 2 2 2 0 RecR protein DUF2154 PF09922.9 ORF50545 - 0.15 11.9 0.1 0.22 11.4 0.1 1.2 1 0 0 1 1 1 0 Cell wall-active antibiotics response 4TMS YvqF HAD_SAK_2 PF18143.1 ORF49673 - 1.5e-08 35.1 0.0 1.8e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins Arc_PepC PF06819.11 ORF49673 - 0.11 12.7 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminal Domain Uteroglobin PF01099.17 ORF4947 - 0.054 13.8 2.0 0.076 13.4 0.2 1.9 2 0 0 2 2 2 0 Uteroglobin family CEP44 PF15007.6 ORF49131 - 0.034 14.3 0.2 0.044 14.0 0.2 1.3 1 1 0 1 1 1 0 Centrosomal spindle body, CEP44 TrkA_TMD PF18613.1 ORF4850 - 9.9 5.7 8.1 1.5 8.3 0.4 2.4 2 0 0 2 2 2 0 Tyrosine kinase receptor A trans-membrane domain Smg4_UPF3 PF03467.15 ORF48342 - 0.0047 17.0 0.1 0.005 16.9 0.1 1.2 1 0 0 1 1 1 1 Smg-4/UPF3 family Hydrolase_like PF13242.6 ORF48062 - 5.2e-10 39.2 0.0 1e-09 38.3 0.0 1.5 2 0 0 2 2 2 1 HAD-hyrolase-like HAD_2 PF13419.6 ORF48062 - 5e-05 23.5 0.0 6e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Lenti_VIF_2 PF07401.12 ORF47519 - 0.1 11.9 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein MSL1_dimer PF16801.5 ORF46993 - 2.1 8.2 8.3 1.5 8.6 6.3 1.7 2 0 0 2 2 2 0 Dimerisation domain of Male-specific-Lethal 1 OKR_DC_1_C PF03711.15 ORF46750 - 0.1 12.9 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, C-terminal domain DUF3452 PF11934.8 ORF46735 - 0.23 11.0 2.3 0.26 10.8 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) LMBR1 PF04791.16 ORF46580 - 0.019 13.9 0.6 0.023 13.6 0.6 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein ArfGap PF01412.18 ORF45160 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf GRIP PF01465.20 ORF45 - 0.047 13.6 3.5 0.066 13.1 1.0 2.4 1 1 1 2 2 2 0 GRIP domain Ribosomal_S19e PF01090.19 ORF44454 - 1.1e-23 83.5 0.3 1.2e-23 83.4 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e DUF2062 PF09835.9 ORF43280 - 0.0076 16.1 0.8 0.01 15.7 0.8 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) Bul1_C PF04426.12 ORF43029 - 0.026 13.9 0.2 0.027 13.9 0.2 1.1 1 0 0 1 1 1 0 Bul1 C terminus BioY PF02632.14 ORF42665 - 0.014 15.5 1.5 0.018 15.1 1.5 1.1 1 0 0 1 1 1 0 BioY family SLC3A2_N PF16028.5 ORF41626 - 0.1 12.1 1.2 0.13 11.8 1.2 1.4 1 1 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus zf-C2H2 PF00096.26 ORF41117 - 1.2e-08 34.9 14.8 1.4e-05 25.2 3.7 2.6 3 0 0 3 3 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF41117 - 1.3e-07 31.7 13.2 0.00018 21.8 1.4 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF41117 - 9.9e-06 26.0 18.3 0.001 19.7 3.3 2.9 3 0 0 3 3 3 2 C2H2-type zinc finger zf-met PF12874.7 ORF41117 - 7.7e-05 22.9 10.2 0.074 13.5 3.2 2.8 3 0 0 3 3 3 2 Zinc-finger of C2H2 type C1_1 PF00130.22 ORF41117 - 0.00063 19.6 2.3 0.0014 18.5 2.3 1.6 1 1 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-H2C2_5 PF13909.6 ORF41117 - 0.0052 16.5 3.8 0.0052 16.5 3.8 3.3 4 0 0 4 4 4 1 C2H2-type zinc-finger domain zf-C2H2_11 PF16622.5 ORF41117 - 0.014 15.2 7.2 0.056 13.2 1.1 2.3 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF41117 - 0.047 14.0 10.3 2.1 8.7 0.2 2.5 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-BED PF02892.15 ORF41117 - 0.13 12.3 12.0 0.59 10.2 2.7 2.4 1 1 1 2 2 2 0 BED zinc finger Evr1_Alr PF04777.13 ORF41117 - 0.46 11.0 3.3 15 6.1 3.3 2.1 1 1 0 1 1 1 0 Erv1 / Alr family Zn_Tnp_IS1595 PF12760.7 ORF41117 - 0.52 10.3 8.8 1.8 8.6 7.5 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-C2HE PF16278.5 ORF41117 - 0.93 10.0 6.8 0.32 11.5 3.4 1.9 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger DUF629 PF04780.12 ORF41117 - 3.7 6.0 6.6 11 4.4 2.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF629) Plant_zn_clust PF10533.9 ORF40892 - 1.3 9.1 7.4 0.24 11.4 2.4 2.2 2 0 0 2 2 2 0 Plant zinc cluster domain TMEM192 PF14802.6 ORF40699 - 0.16 11.0 3.7 0.2 10.8 3.7 1.1 1 0 0 1 1 1 0 TMEM192 family MORN PF02493.20 ORF40689 - 7.7e-09 34.9 9.1 0.0003 20.5 1.8 2.6 3 0 0 3 3 3 2 MORN repeat DUF1923 PF09083.10 ORF40689 - 0.27 11.0 1.9 1.7 8.4 1.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF1923) HA PF03457.14 ORF39656 - 0.057 13.8 0.1 0.082 13.3 0.1 1.2 1 0 0 1 1 1 0 Helicase associated domain Endotoxin_N PF03945.14 ORF39414 - 0.028 14.1 0.1 0.028 14.1 0.1 1.1 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain Fer4_24 PF18109.1 ORF39414 - 0.076 13.3 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain DBD_HTH PF18430.1 ORF39070 - 0.14 12.0 0.1 0.21 11.4 0.1 1.2 1 0 0 1 1 1 0 Putative DNA-binding domain TACI-CRD2 PF09305.10 ORF38895 - 1.4 9.0 7.3 0.52 10.4 3.3 2.2 2 0 0 2 2 2 0 TACI, cysteine-rich domain Helicase_RecD PF05127.14 ORF38489 - 0.001 19.0 0.0 0.0011 18.8 0.0 1.1 1 0 0 1 1 1 1 Helicase HTH_Tnp_4 PF13613.6 ORF38489 - 0.088 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease RhlB PF12300.8 ORF38489 - 0.34 11.0 5.8 0.42 10.7 5.8 1.2 1 0 0 1 1 1 0 ATP-dependent RNA helicase RhlB Herpes_LMP1 PF05297.11 ORF37056 - 0.59 9.3 3.4 0.63 9.2 3.4 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) TMEM43 PF07787.12 ORF37056 - 5.9 6.2 5.8 6.7 6.0 5.8 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 DUF2651 PF10852.8 ORF34391 - 0.019 15.6 0.8 0.026 15.1 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2651) TolB_N PF04052.13 ORF33576 - 0.002 18.3 0.0 0.0021 18.2 0.0 1.1 1 0 0 1 1 1 1 TolB amino-terminal domain DEC-1_N PF04625.13 ORF33564 - 0.015 14.3 0.7 0.015 14.3 0.7 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region POM121 PF15229.6 ORF33083 - 0.041 13.5 1.8 0.049 13.3 1.8 1.1 1 0 0 1 1 1 0 POM121 family TcpA PF05946.12 ORF3187 - 0.12 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Toxin-coregulated pilus subunit TcpA Tenui_NCP PF04876.12 ORF31013 - 0.13 11.9 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Tenuivirus major non-capsid protein DUF5438 PF17506.2 ORF30130 - 0.059 13.7 3.7 0.13 12.6 1.6 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5438) PsaF PF17550.2 ORF28753 - 0.013 15.0 0.1 0.013 15.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function DUF551 PF04448.12 ORF28494 - 0.022 15.7 2.3 0.22 12.5 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF551) AHSA1 PF08327.11 ORF28494 - 0.094 13.0 0.1 2.8 8.2 0.0 2.0 2 0 0 2 2 2 0 Activator of Hsp90 ATPase homolog 1-like protein Dam PF05869.11 ORF28494 - 0.11 12.0 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 DNA N-6-adenine-methyltransferase (Dam) SAM_3 PF18016.1 ORF27789 - 0.043 13.6 0.0 0.063 13.1 0.0 1.2 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF4866 PF16160.5 ORF27341 - 0.05 12.9 0.0 0.063 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4866) DUF4453 PF14627.6 ORF26652 - 0.014 15.5 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4453) HTH_CodY PF08222.11 ORF26519 - 0.071 12.7 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 CodY helix-turn-helix domain DUF2097 PF09870.9 ORF2629 - 0.035 14.3 0.5 0.049 13.9 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2097) DUF3837 PF12939.7 ORF25981 - 0.035 14.5 0.0 0.048 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3837) DUF4020 PF13212.6 ORF25981 - 0.077 12.8 0.0 0.077 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4020) Thioredoxin PF00085.20 ORF25931 - 0.13 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin CEP44 PF15007.6 ORF2477 - 0.034 14.3 0.2 0.044 14.0 0.2 1.3 1 1 0 1 1 1 0 Centrosomal spindle body, CEP44 Pelovaterin PF17859.1 ORF2394 - 0.14 12.5 0.9 0.24 11.7 0.5 1.7 1 1 0 1 1 1 0 Pelovaterin RIIa PF02197.17 ORF23693 - 0.11 12.1 0.1 0.31 10.7 0.0 1.7 2 0 0 2 2 2 0 Regulatory subunit of type II PKA R-subunit ACR_tran PF00873.19 ORF23419 - 1.1e-27 96.1 11.8 1.3e-27 96.0 11.8 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Orf78 PF06024.12 ORF23419 - 0.12 12.6 0.1 0.17 12.2 0.1 1.3 1 1 0 1 1 1 0 Orf78 (ac78) EphA2_TM PF14575.6 ORF23419 - 0.28 12.1 0.1 0.28 12.1 0.1 1.5 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain UEV PF05743.13 ORF23116 - 0.027 14.3 0.1 0.084 12.7 0.0 1.7 1 1 1 2 2 2 0 UEV domain PRK PF00485.18 ORF22743 - 0.051 13.3 0.1 0.052 13.3 0.1 1.1 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Stonin2_N PF12016.8 ORF20184 - 0.38 10.1 6.5 0.41 10.0 6.5 1.0 1 0 0 1 1 1 0 Stonin 2 DUF4630 PF15443.6 ORF19310 - 0.024 14.8 0.2 0.025 14.7 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4630) Porphobil_deam PF01379.20 ORF18077 - 0.046 13.2 0.1 0.051 13.1 0.1 1.1 1 0 0 1 1 1 0 Porphobilinogen deaminase, dipyromethane cofactor binding domain Pico_P2A PF00947.19 ORF17726 - 0.25 11.3 3.0 0.66 10.0 3.0 1.6 1 1 0 1 1 1 0 Picornavirus core protein 2A DUF1386 PF07138.11 ORF17544 - 0.11 11.7 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1386) NUMOD1 PF07453.13 ORF17096 - 0.76 10.1 6.4 0.33 11.3 0.5 2.7 3 0 0 3 3 3 0 NUMOD1 domain SUD-M PF11633.8 ORF152805 - 0.066 12.9 0.3 0.072 12.8 0.3 1.2 1 0 0 1 1 1 0 Single-stranded poly(A) binding domain LRAT PF04970.13 ORF152728 - 8.3e-07 29.4 0.6 1.3e-06 28.7 0.3 1.4 1 1 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 ORF152728 - 0.053 13.4 0.8 0.1 12.4 0.8 1.5 1 1 1 2 2 2 0 PPPDE putative peptidase domain Corona_NS8 PF12093.8 ORF152166 - 0.04 14.5 0.0 0.046 14.3 0.0 1.1 1 0 0 1 1 1 0 Coronavirus NS8 protein PAP2 PF01569.21 ORF151792 - 6e-08 32.5 3.2 8.2e-08 32.1 3.2 1.3 1 0 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 ORF151792 - 0.0022 17.7 2.1 0.0031 17.2 2.1 1.2 1 0 0 1 1 1 1 PAP2 superfamily Viral_cys_rich PF08008.12 ORF151646 - 0.069 13.2 2.2 0.92 9.6 0.2 2.1 1 1 1 2 2 2 0 Viral cysteine rich DUF4131 PF13567.6 ORF151607 - 0.3 10.7 1.5 0.34 10.5 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) zf-LITAF-like PF10601.9 ORF15155 - 0.049 13.9 0.7 3 8.2 0.1 2.2 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain DUF1296 PF06972.11 ORF150010 - 0.0024 18.0 0.1 0.0033 17.5 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1296) PDZ_assoc PF10600.9 ORF150010 - 0.015 16.1 1.0 0.021 15.6 1.0 1.3 1 1 0 1 1 1 0 PDZ-associated domain of NMDA receptors DUF3285 PF11688.8 ORF149771 - 0.12 12.3 4.4 0.18 11.7 4.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3285) TraA PF05513.11 ORF1486 - 0.13 12.6 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 TraA ATP_synt_H PF05493.13 ORF148547 - 6.4e-17 61.8 4.4 8.6e-17 61.4 4.4 1.1 1 0 0 1 1 1 1 ATP synthase subunit H Caroten_synth PF04240.12 ORF148547 - 0.0081 16.0 1.4 0.0089 15.9 1.4 1.1 1 0 0 1 1 1 1 Carotenoid biosynthesis protein NADHdh PF00146.21 ORF147882 - 4.1e-05 23.0 8.4 4.3e-05 23.0 8.4 1.1 1 0 0 1 1 1 1 NADH dehydrogenase PGG PF13962.6 ORF147576 - 0.097 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function Corona_5a PF06336.11 ORF146968 - 0.023 14.7 0.0 0.033 14.2 0.0 1.3 1 0 0 1 1 1 0 Coronavirus 5a protein zf-H2C2_2 PF13465.6 ORF145640 - 7.5e-14 51.4 9.5 5.8e-07 29.7 0.7 2.9 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF145640 - 1.8e-13 50.1 16.3 7.1e-07 29.3 0.5 3.6 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF145640 - 4.5e-10 39.5 12.2 0.00027 21.5 0.3 3.2 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF145640 - 1.3e-05 24.9 3.1 0.0017 18.1 0.8 2.3 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF145640 - 6.4e-05 23.1 3.0 0.063 13.6 0.0 2.6 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-Di19 PF05605.12 ORF145640 - 0.00043 20.5 1.3 0.00043 20.5 1.3 1.8 1 1 0 2 2 2 1 Drought induced 19 protein (Di19), zinc-binding zf-AN1 PF01428.16 ORF145640 - 0.023 14.9 1.6 2.3 8.4 0.1 2.3 2 0 0 2 2 2 0 AN1-like Zinc finger zf-BED PF02892.15 ORF145640 - 0.027 14.5 7.3 0.056 13.5 1.1 2.3 1 1 1 2 2 2 0 BED zinc finger zf-C2H2_8 PF15909.5 ORF145640 - 0.036 14.4 2.6 0.047 14.0 2.6 1.4 1 1 0 1 1 1 0 C2H2-type zinc ribbon zf-C2H2_3rep PF18868.1 ORF145640 - 0.039 14.6 2.0 4 8.1 0.3 2.1 1 1 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-C2HC_2 PF13913.6 ORF145640 - 0.085 12.8 1.5 0.085 12.8 1.5 2.7 3 1 0 3 3 3 0 zinc-finger of a C2HC-type Ephrin_rec_like PF07699.13 ORF145640 - 0.11 12.2 1.3 0.44 10.4 1.3 1.8 1 1 0 1 1 1 0 Putative ephrin-receptor like zf-MYST PF17772.1 ORF145640 - 0.15 11.7 1.8 9.3 5.9 0.0 2.2 2 0 0 2 2 2 0 MYST family zinc finger domain zf-H2C2_5 PF13909.6 ORF145640 - 0.21 11.4 0.2 0.21 11.4 0.2 4.2 4 1 0 4 4 4 0 C2H2-type zinc-finger domain zf-met PF12874.7 ORF145640 - 0.21 12.0 5.9 2.6 8.5 0.3 3.1 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 ORF145640 - 0.38 10.8 12.1 1.1 9.4 0.5 3.4 4 0 0 4 4 3 0 C2H2-type zinc finger Zn_Tnp_IS1595 PF12760.7 ORF145640 - 0.61 10.1 4.6 3.5 7.7 4.6 1.9 1 1 0 1 1 1 0 Transposase zinc-ribbon domain zf-C2HE PF16278.5 ORF145640 - 2 8.9 7.3 0.4 11.2 0.5 2.5 1 1 2 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger Dzip-like_N PF13815.6 ORF145562 - 0.0061 16.5 0.2 0.0072 16.3 0.2 1.2 1 0 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal Ank_5 PF13857.6 ORF145323 - 0.00097 19.4 0.0 0.0013 19.0 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF145323 - 0.022 15.4 0.0 0.025 15.2 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF145323 - 0.023 15.3 0.0 0.17 12.5 0.0 1.9 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Ank PF00023.30 ORF145323 - 0.059 13.8 0.0 1.9 9.1 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeat Ndc1_Nup PF09531.10 ORF144919 - 0.46 9.1 5.0 0.48 9.1 5.0 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Pox_P35 PF03213.14 ORF144919 - 0.77 8.9 4.7 0.81 8.8 4.7 1.1 1 0 0 1 1 1 0 Poxvirus P35 protein Baculo_11_kDa PF06143.11 ORF144919 - 1.9 8.1 8.4 2.8 7.6 8.4 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family Herpes_LMP1 PF05297.11 ORF144919 - 5 6.2 7.7 6.2 5.9 7.7 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) EMP24_GP25L PF01105.24 ORF144919 - 6.7 6.6 5.9 8 6.4 5.9 1.1 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Amidase02_C PF12123.8 ORF1446 - 0.16 11.7 0.0 0.32 10.7 0.0 1.5 1 0 0 1 1 1 0 N-acetylmuramoyl-l-alanine amidase WASH-7_mid PF14744.6 ORF143546 - 0.024 13.7 0.1 0.026 13.6 0.1 1.0 1 0 0 1 1 1 0 WASH complex subunit 7 ArfGap PF01412.18 ORF14335 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf LCD1 PF09798.9 ORF142825 - 0.23 10.0 5.7 0.26 9.7 5.7 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein DUF2661 PF10860.8 ORF142366 - 0.052 13.7 1.6 0.057 13.5 0.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2661) DUF2407_C PF13373.6 ORF142287 - 0.16 12.1 0.2 0.18 12.0 0.2 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain HrpE PF06188.12 ORF141864 - 0.15 11.9 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E OKR_DC_1_C PF03711.15 ORF141666 - 0.1 12.9 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, C-terminal domain DEC-1_N PF04625.13 ORF141600 - 0.015 14.3 0.7 0.015 14.3 0.7 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Baculo_E56 PF04639.12 ORF141372 - 0.11 11.7 1.2 0.12 11.6 1.2 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope DFF-C PF09033.10 ORF140754 - 0.025 14.5 0.1 0.027 14.4 0.1 1.1 1 0 0 1 1 1 0 DNA Fragmentation factor 45kDa, C terminal domain NEXCaM_BD PF16644.5 ORF140528 - 0.014 15.7 1.4 0.015 15.5 1.4 1.2 1 0 0 1 1 1 0 Regulatory region of Na+/H+ exchanger NHE binds to calmodulin MAGE PF01454.19 ORF140388 - 0.013 15.3 0.0 0.013 15.2 0.0 1.0 1 0 0 1 1 1 0 MAGE family Isochorismatase PF00857.20 ORF14021 - 0.069 13.3 0.0 0.081 13.1 0.0 1.2 1 0 0 1 1 1 0 Isochorismatase family Corona_NS8 PF12093.8 ORF139893 - 0.04 14.5 0.0 0.046 14.3 0.0 1.1 1 0 0 1 1 1 0 Coronavirus NS8 protein zf-CCHH PF10283.9 ORF139782 - 0.17 11.9 1.0 0.34 11.0 1.0 1.5 1 0 0 1 1 1 0 PBZ domain BCMA-Tall_bind PF09257.10 ORF139531 - 0.0048 17.0 1.4 0.15 12.2 0.2 2.4 3 0 0 3 3 3 2 BCMA, TALL-1 binding Pacifastin_I PF05375.13 ORF139351 - 2.5 7.9 29.1 0.1 12.4 6.7 2.4 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) DUF4234 PF14018.6 ORF138400 - 0.1 12.8 5.0 1.3 9.2 0.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4234) Opy2 PF09463.10 ORF138300 - 0.072 13.4 3.7 0.12 12.7 3.7 1.4 1 0 0 1 1 1 0 Opy2 protein Gyro_capsid PF04162.12 ORF137450 - 0.03 12.8 0.0 0.032 12.7 0.0 1.1 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) ASFV_L11L PF05293.11 ORF137137 - 5.7 7.3 7.9 11 6.4 0.5 2.1 2 0 0 2 2 2 0 African swine fever virus (ASFV) L11L protein COX7a PF02238.15 ORF136633 - 0.017 15.5 3.2 3.5 8.1 0.2 2.3 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII Ezh2_MCSS PF18600.1 ORF135875 - 0.12 12.0 0.5 0.12 12.0 0.5 2.2 2 0 0 2 2 2 0 MCSS domain COG2 PF06148.11 ORF135388 - 0.19 11.8 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Dexa_ind PF15198.6 ORF135294 - 0.18 11.9 7.5 0.079 13.1 5.6 1.4 1 1 0 1 1 1 0 Dexamethasone-induced Tagatose_6_P_K PF08013.11 ORF134943 - 0.036 12.8 0.0 0.041 12.6 0.0 1.1 1 0 0 1 1 1 0 Tagatose 6 phosphate kinase DUF832 PF05734.11 ORF133758 - 0.032 13.7 0.2 0.032 13.7 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) Tenui_NS3 PF05310.12 ORF133750 - 0.071 13.2 0.0 0.083 13.0 0.0 1.0 1 0 0 1 1 1 0 Tenuivirus movement protein ArfGap PF01412.18 ORF133366 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf DUF3086 PF11285.8 ORF131319 - 0.067 12.3 2.9 0.078 12.1 2.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) PVL_ORF50 PF07768.11 ORF131319 - 0.079 13.3 5.2 0.093 13.1 5.2 1.2 1 0 0 1 1 1 0 PVL ORF-50-like family UPF0239 PF06783.11 ORF131319 - 6.9 6.9 8.7 10 6.4 8.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) NADHdh PF00146.21 ORF131141 - 4.1e-05 23.0 8.4 4.3e-05 23.0 8.4 1.1 1 0 0 1 1 1 1 NADH dehydrogenase PDDEXK_6 PF04720.12 ORF131054 - 0.068 13.1 0.5 0.075 13.0 0.5 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function LINES_N PF14694.6 ORF13062 - 0.04 13.4 0.8 0.04 13.4 0.8 1.1 1 0 0 1 1 1 0 Lines N-terminus zf-C5HC2 PF02928.16 ORF129951 - 0.053 13.9 1.3 0.097 13.1 1.3 1.4 1 0 0 1 1 1 0 C5HC2 zinc finger DUF3678 PF12435.8 ORF129194 - 2.8 7.4 10.6 5.9 6.4 10.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) DUF1799 PF08809.11 ORF129118 - 0.14 12.4 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) ArfGap PF01412.18 ORF128586 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf DUF3475 PF11961.8 ORF12749 - 0.018 15.1 0.2 0.031 14.3 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3475) TAN PF11640.8 ORF127211 - 0.052 13.7 1.1 0.063 13.4 1.1 1.0 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair Ribosomal_60s PF00428.19 ORF127001 - 10 6.8 11.4 31 5.3 11.4 1.8 1 1 0 1 1 1 0 60s Acidic ribosomal protein Sin3_corepress PF08295.12 ORF126928 - 0.084 13.0 0.0 0.098 12.7 0.0 1.2 1 0 0 1 1 1 0 Sin3 family co-repressor UPF0179 PF03684.13 ORF126577 - 0.06 13.2 0.2 0.068 13.0 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0179) Vpu PF00558.19 ORF126024 - 0.068 13.0 0.1 0.068 13.0 0.1 1.9 2 0 0 2 2 2 0 Vpu protein Ras PF00071.22 ORF12588 - 1.3e-15 57.4 0.1 1.5e-15 57.2 0.1 1.1 1 0 0 1 1 1 1 Ras family Glyco_transf_54 PF04666.13 ORF12588 - 0.022 13.7 0.0 0.026 13.4 0.0 1.0 1 0 0 1 1 1 0 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region ArfGap PF01412.18 ORF125869 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Syntaxin-6_N PF09177.11 ORF12581 - 0.032 14.8 0.1 0.049 14.2 0.1 1.3 1 0 0 1 1 1 0 Syntaxin 6, N-terminal Sp38 PF07354.12 ORF12581 - 0.041 13.3 0.1 0.046 13.1 0.1 1.1 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) Pico_P2A PF00947.19 ORF124997 - 0.25 11.3 3.0 0.66 10.0 3.0 1.6 1 1 0 1 1 1 0 Picornavirus core protein 2A Claudin_2 PF13903.6 ORF124542 - 0.42 10.3 9.7 0.42 10.3 9.7 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction EVC2_like PF12297.8 ORF124542 - 0.53 8.9 5.6 0.53 8.9 5.6 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Prog_receptor PF02161.15 ORF123752 - 0.011 14.5 0.4 0.011 14.5 0.4 1.0 1 0 0 1 1 1 0 Progesterone receptor TssN PF17555.2 ORF122897 - 0.036 13.5 1.7 0.039 13.4 1.7 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN SCA7 PF08313.12 ORF122873 - 0.0073 16.2 0.0 0.0073 16.2 0.0 1.5 2 0 0 2 2 2 1 SCA7, zinc-binding domain NEXCaM_BD PF16644.5 ORF122805 - 0.014 15.7 1.4 0.015 15.5 1.4 1.2 1 0 0 1 1 1 0 Regulatory region of Na+/H+ exchanger NHE binds to calmodulin Shisa PF13908.6 ORF121657 - 0.26 11.5 0.7 0.33 11.2 0.7 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Fer4_13 PF13370.6 ORF121562 - 0.054 14.0 0.0 0.13 12.8 0.0 1.6 1 0 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I ANAPC4 PF12896.7 ORF120863 - 0.012 15.1 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 Uteroglobin PF01099.17 ORF1202 - 0.054 13.8 2.0 0.076 13.4 0.2 1.9 2 0 0 2 2 2 0 Uteroglobin family Bac_globin PF01152.21 ORF119859 - 0.1 12.7 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial-like globin MIP PF00230.20 ORF119651 - 0.0017 18.1 0.4 0.0028 17.4 0.4 1.4 1 1 0 1 1 1 1 Major intrinsic protein RNase_Zc3h12a_2 PF14626.6 ORF119580 - 0.16 12.2 0.1 0.2 11.9 0.1 1.1 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain CRAL_TRIO PF00650.20 ORF119327 - 1.2e-08 34.9 0.0 1.2e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain DUF2538 PF10804.8 ORF119190 - 0.17 11.7 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2538) zf-MYND PF01753.18 ORF115906 - 9.8e-09 35.2 11.4 1.4e-08 34.7 11.4 1.3 1 0 0 1 1 1 1 MYND finger Ecl1 PF12855.7 ORF115906 - 0.0007 20.8 1.9 0.00092 20.4 1.9 1.3 1 0 0 1 1 1 1 ECL1/2/3 zinc binding proteins Dexa_ind PF15198.6 ORF115809 - 0.18 11.9 7.5 0.079 13.1 5.6 1.4 1 1 0 1 1 1 0 Dexamethasone-induced Gly-rich_Ago1 PF12764.7 ORF11551 - 0.0087 16.8 0.1 0.01 16.6 0.1 1.1 1 0 0 1 1 1 1 Glycine-rich region of argonaut Glyoxalase_5 PF14696.6 ORF114589 - 0.12 12.5 0.0 0.13 12.5 0.0 1.0 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Myticin-prepro PF10690.9 ORF114215 - 0.13 12.5 1.0 0.15 12.3 1.0 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Myticin-prepro PF10690.9 ORF114095 - 0.13 12.5 1.0 0.15 12.3 1.0 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel SNRNP27 PF08648.12 ORF113822 - 0.1 12.7 4.6 0.084 13.0 2.4 1.9 1 1 1 2 2 2 0 U4/U6.U5 small nuclear ribonucleoproteins DUF3198 PF11433.8 ORF113822 - 0.15 12.0 2.8 8.6 6.3 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3198) Plant_zn_clust PF10533.9 ORF113283 - 1.3 9.1 7.4 0.24 11.4 2.4 2.2 2 0 0 2 2 2 0 Plant zinc cluster domain Herpes_LMP1 PF05297.11 ORF112929 - 0.59 9.3 3.4 0.63 9.2 3.4 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) TMEM43 PF07787.12 ORF112929 - 5.9 6.2 5.8 6.7 6.0 5.8 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 ArfGap PF01412.18 ORF112053 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Aa_trans PF01490.18 ORF111009 - 0.06 12.0 1.2 0.062 12.0 1.2 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Tcell_CD4_C PF12104.8 ORF110694 - 0.049 13.5 0.0 0.081 12.9 0.0 1.4 1 0 0 1 1 1 0 T cell CD4 receptor C terminal region NADHdh PF00146.21 ORF108900 - 4.1e-05 23.0 8.4 4.3e-05 23.0 8.4 1.1 1 0 0 1 1 1 1 NADH dehydrogenase BTD PF09270.10 ORF108496 - 0.024 14.9 0.2 0.025 14.8 0.2 1.1 1 0 0 1 1 1 0 Beta-trefoil DNA-binding domain MICSWaP PF17018.5 ORF108496 - 0.072 12.6 3.2 0.087 12.4 3.2 1.0 1 0 0 1 1 1 0 Spore wall protein DUF647 PF04884.14 ORF108496 - 0.14 11.8 1.1 0.14 11.7 1.1 1.1 1 0 0 1 1 1 0 Vitamin B6 photo-protection and homoeostasis zinc-ribbons_6 PF07191.12 ORF107637 - 0.0069 16.4 6.9 0.2 11.6 6.8 2.1 1 1 0 1 1 1 1 zinc-ribbons zf-RING_2 PF13639.6 ORF107637 - 0.034 14.5 10.7 0.049 14.0 10.7 1.3 1 0 0 1 1 1 0 Ring finger domain zf-UDP PF14569.6 ORF107637 - 0.24 11.5 5.5 0.36 11.0 5.5 1.3 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-C3HC4 PF00097.25 ORF107637 - 0.35 10.8 12.2 0.5 10.3 12.2 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF107637 - 0.59 10.0 10.5 0.98 9.3 10.5 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-MIZ PF02891.20 ORF107637 - 0.94 9.3 9.1 0.78 9.5 7.0 1.8 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger zf-RING_4 PF14570.6 ORF107637 - 1.1 9.2 10.1 3.9 7.4 10.1 1.9 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain HypA PF01155.19 ORF107637 - 1.7 8.7 6.0 3.1 7.9 6.0 1.6 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NADHdh PF00146.21 ORF107080 - 4.1e-05 23.0 8.4 4.3e-05 23.0 8.4 1.1 1 0 0 1 1 1 1 NADH dehydrogenase TrbL PF04610.14 ORF106794 - 0.1 12.4 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 TrbL/VirB6 plasmid conjugal transfer protein LCE6A PF15858.5 ORF10543 - 1.2 9.9 12.7 2.8 8.8 12.8 1.7 1 1 0 1 1 1 0 Late cornified envelope protein 6A family DUF3256 PF11644.8 ORF105020 - 0.042 13.4 0.6 0.053 13.0 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3256) NADH_dh_m_C1 PF15088.6 ORF10363 - 0.12 12.0 0.2 0.19 11.4 0.2 1.3 1 0 0 1 1 1 0 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial F-box PF00646.33 ORF103538 - 0.00083 19.2 0.0 0.0012 18.7 0.0 1.2 1 0 0 1 1 1 1 F-box domain PepSY_like PF11396.8 ORF103538 - 0.069 13.7 0.1 0.081 13.5 0.1 1.1 1 0 0 1 1 1 0 Putative beta-lactamase-inhibitor-like, PepSY-like Peptidase_S11 PF00768.20 ORF102825 - 5.8e-05 22.6 0.0 6.7e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase zf-FPG_IleRS PF06827.14 ORF10268 - 0.016 15.0 7.8 0.24 11.3 4.2 2.9 3 1 0 3 3 3 0 Zinc finger found in FPG and IleRS CxxCxxCC PF03692.15 ORF10245 - 1e-06 29.4 5.2 2.9e-06 27.9 5.2 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain Forkhead PF00250.18 ORF101594 - 0.059 13.6 0.1 0.071 13.4 0.1 1.1 1 0 0 1 1 1 0 Forkhead domain DUF4649 PF15507.6 ORF100294 - 0.032 14.2 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4649) SpoVS PF04232.12 NODE_65113_length_247_cov_0.834906_g57172_i0forward_frame_1 - 0.013 15.2 0.0 0.017 14.8 0.0 1.2 1 0 0 1 1 1 0 Stage V sporulation protein S (SpoVS) Phage_tail_S PF05069.13 NODE_65112_length_247_cov_0.882075_g57171_i0forward_frame_1 - 0.047 13.5 0.1 0.053 13.4 0.1 1.1 1 0 0 1 1 1 0 Phage virion morphogenesis family PUF PF00806.19 NODE_65106_length_247_cov_0.966981_g57165_i0reverse_frame_1 - 5.4e-13 47.9 0.1 9.6e-05 21.9 0.0 2.9 3 0 0 3 3 3 2 Pumilio-family RNA binding repeat MoaF_C PF17409.2 NODE_65103_length_247_cov_1.047170_g57162_i0reverse_frame_1 - 0.044 13.5 1.0 0.051 13.2 1.0 1.1 1 0 0 1 1 1 0 MoaF C-terminal domain DUF3915 PF13054.6 NODE_65103_length_247_cov_1.047170_g57162_i0forward_frame_1 - 0.19 11.7 1.4 0.24 11.4 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_65103_length_247_cov_1.047170_g57162_i0forward_frame_1 - 1.7 6.9 5.5 2.2 6.5 5.5 1.2 1 0 0 1 1 1 0 Atrophin-1 family Aa_trans PF01490.18 NODE_65100_length_247_cov_1.108491_g57159_i0reverse_frame_1 - 1.1e-05 24.3 1.8 1.4e-05 24.0 1.8 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 NODE_65100_length_247_cov_1.108491_g57159_i0reverse_frame_1 - 0.00053 19.1 1.6 0.00068 18.8 1.6 1.2 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family 14-3-3 PF00244.20 NODE_65094_length_247_cov_1.132075_g57153_i0forward_frame_1 - 1.1e-13 51.2 0.4 1.4e-13 50.9 0.4 1.1 1 0 0 1 1 1 1 14-3-3 protein L27_N PF09060.10 NODE_65094_length_247_cov_1.132075_g57153_i0forward_frame_1 - 0.024 14.7 0.1 0.046 13.8 0.1 1.4 1 0 0 1 1 1 0 L27_N hSac2 PF12456.8 NODE_65093_length_247_cov_1.132075_g57152_i0forward_frame_1 - 0.042 13.6 0.1 0.055 13.2 0.1 1.2 1 0 0 1 1 1 0 Inositol phosphatase DisA_N PF02457.16 NODE_65090_length_247_cov_1.132075_g57149_i0reverse_frame_1 - 0.081 12.5 0.1 0.11 12.0 0.1 1.4 1 1 0 1 1 1 0 DisA bacterial checkpoint controller nucleotide-binding Arylsulfotrans PF05935.11 NODE_65090_length_247_cov_1.132075_g57149_i0reverse_frame_1 - 0.14 11.0 0.0 0.16 10.8 0.0 1.0 1 0 0 1 1 1 0 Arylsulfotransferase (ASST) CTXphi_pIII-N1 PF16710.5 NODE_65079_length_247_cov_1.316038_g57138_i0forward_frame_1 - 0.01 15.9 1.3 0.011 15.8 1.3 1.2 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII DUF3989 PF13150.6 NODE_65067_length_247_cov_1.419811_g57126_i0reverse_frame_1 - 0.008 15.9 0.1 0.0092 15.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3989) SHP PF03579.13 NODE_65067_length_247_cov_1.419811_g57126_i0forward_frame_1 - 0.027 14.4 0.6 0.04 13.9 0.6 1.3 1 0 0 1 1 1 0 Small hydrophobic protein DUF4345 PF14248.6 NODE_65058_length_247_cov_1.528302_g57117_i0forward_frame_1 - 0.022 14.7 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4345) DUF3951 PF13131.6 NODE_65057_length_247_cov_1.533019_g57116_i0reverse_frame_1 - 0.0089 16.2 0.3 0.015 15.5 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3951) IFRD PF05004.13 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_1 - 0.024 13.7 0.1 0.026 13.7 0.1 1.0 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) Defensin_like PF10868.8 NODE_65047_length_247_cov_1.683962_g57106_i0reverse_frame_1 - 0.033 15.0 2.1 8.1 7.3 1.9 2.2 1 1 1 2 2 2 0 Cysteine-rich antifungal protein 2, defensin-like ZFYVE21_C PF16696.5 NODE_65038_length_247_cov_1.792453_g57097_i0reverse_frame_1 - 0.18 11.7 0.3 0.24 11.2 0.3 1.1 1 0 0 1 1 1 0 Zinc finger FYVE domain-containing protein 21 C-terminus GTP_EFTU PF00009.27 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_1 - 6.4e-28 97.6 0.5 7e-28 97.5 0.5 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Septin PF00735.18 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_1 - 5.7e-05 22.5 0.1 6.5e-05 22.3 0.1 1.0 1 0 0 1 1 1 1 Septin MMR_HSR1 PF01926.23 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_1 - 0.00068 19.7 0.0 0.00072 19.6 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase AIG1 PF04548.16 NODE_65032_length_247_cov_1.867925_g57091_i0forward_frame_1 - 0.0018 17.6 0.0 0.0018 17.6 0.0 1.2 1 0 0 1 1 1 1 AIG1 family Hormone_6 PF00236.18 NODE_65030_length_247_cov_1.877358_g57089_i0reverse_frame_1 - 0.048 13.6 3.5 0.055 13.5 3.2 1.3 1 1 0 1 1 1 0 Glycoprotein hormone Ribosomal_L37ae PF01780.19 NODE_65030_length_247_cov_1.877358_g57089_i0reverse_frame_1 - 0.24 11.5 3.1 0.38 10.8 3.1 1.5 1 1 0 1 1 1 0 Ribosomal L37ae protein family EMC3_TMCO1 PF01956.16 NODE_65027_length_247_cov_1.900943_g57086_i0forward_frame_1 - 0.054 13.2 0.1 0.061 13.0 0.1 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Chitin_bind_1 PF00187.19 NODE_65025_length_247_cov_1.924528_g57084_i0forward_frame_1 - 0.44 11.1 8.8 1.2 9.7 1.2 2.4 2 0 0 2 2 2 0 Chitin recognition protein UPF0139 PF03669.13 NODE_65025_length_247_cov_1.924528_g57084_i0forward_frame_1 - 2.9 7.8 8.1 3 7.8 7.3 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0139) SNARE PF05739.19 NODE_65022_length_247_cov_1.933962_g57081_i0forward_frame_1 - 0.29 11.2 2.1 1.6 8.8 0.2 2.2 2 0 0 2 2 2 0 SNARE domain zf-CCHC PF00098.23 NODE_65020_length_247_cov_1.943396_g57079_i0forward_frame_1 - 1.9e-07 30.9 2.6 3.6e-07 30.0 2.6 1.4 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_4 PF14392.6 NODE_65020_length_247_cov_1.943396_g57079_i0forward_frame_1 - 0.002 17.8 0.5 0.0036 17.0 0.5 1.4 1 0 0 1 1 1 1 Zinc knuckle EF-hand_6 PF13405.6 NODE_65013_length_247_cov_2.056604_g57072_i0forward_frame_1 - 0.00053 19.7 0.1 0.0012 18.7 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_65013_length_247_cov_2.056604_g57072_i0forward_frame_1 - 0.033 13.7 0.5 0.1 12.2 0.0 2.1 2 0 0 2 2 2 0 EF hand EF-hand_11 PF08976.11 NODE_65013_length_247_cov_2.056604_g57072_i0forward_frame_1 - 0.036 14.9 0.2 0.043 14.7 0.2 1.1 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_65013_length_247_cov_2.056604_g57072_i0forward_frame_1 - 0.059 13.8 1.4 0.076 13.5 1.4 1.3 1 0 0 1 1 1 0 EF-hand domain pair DUF5436 PF17504.2 NODE_65010_length_247_cov_2.103774_g57069_i0reverse_frame_1 - 0.27 11.6 4.8 0.1 12.9 2.1 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5436) RCC1 PF00415.18 NODE_65010_length_247_cov_2.103774_g57069_i0forward_frame_1 - 3e-08 34.2 0.0 0.00029 21.4 0.0 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_65010_length_247_cov_2.103774_g57069_i0forward_frame_1 - 0.0022 17.7 0.1 0.0035 17.1 0.1 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat DUF1525 PF07511.11 NODE_65007_length_247_cov_2.193396_g57066_i0reverse_frame_1 - 0.024 14.8 0.1 0.027 14.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1525) S_4TM PF18159.1 NODE_65007_length_247_cov_2.193396_g57066_i0reverse_frame_1 - 0.52 9.6 2.6 0.6 9.4 2.6 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Peptidase_S7 PF00949.21 NODE_65004_length_247_cov_2.273585_g57063_i0forward_frame_1 - 0.059 13.2 0.0 0.066 13.0 0.0 1.1 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease Pkinase PF00069.25 NODE_65000_length_247_cov_2.320755_g57059_i0forward_frame_1 - 7.8e-07 28.7 0.0 8.3e-07 28.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_65000_length_247_cov_2.320755_g57059_i0forward_frame_1 - 0.0036 16.6 0.0 0.0045 16.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Corona_NS1 PF06145.11 NODE_64998_length_247_cov_2.377358_g57057_i0forward_frame_1 - 0.42 10.2 3.7 0.14 11.7 1.0 1.6 2 0 0 2 2 2 0 Coronavirus nonstructural protein NS1 DER1 PF04511.15 NODE_64995_length_247_cov_2.410377_g57054_i0forward_frame_1 - 0.01 15.8 2.0 0.011 15.7 2.0 1.1 1 0 0 1 1 1 0 Der1-like family DUF4850 PF16142.5 NODE_64995_length_247_cov_2.410377_g57054_i0forward_frame_1 - 0.1 12.0 0.3 0.11 12.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4850) COPI_C PF06957.11 NODE_64979_length_247_cov_2.834906_g57038_i0reverse_frame_1 - 0.12 11.1 0.3 0.13 11.0 0.3 1.0 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus Ins145_P3_rec PF08709.11 NODE_64976_length_247_cov_2.976415_g57035_i0forward_frame_1 - 0.023 13.9 0.1 0.023 13.9 0.1 1.2 1 0 0 1 1 1 0 Inositol 1,4,5-trisphosphate/ryanodine receptor FANC_SAP PF18081.1 NODE_64975_length_247_cov_3.033019_g57034_i0forward_frame_1 - 0.0079 16.3 0.6 0.014 15.5 0.6 1.5 1 0 0 1 1 1 1 Fanconi anemia-associated nuclease SAP domain PAP_PilO PF06864.12 NODE_64974_length_247_cov_3.042453_g57033_i0forward_frame_1 - 0.43 9.3 5.4 0.42 9.4 5.4 1.1 1 0 0 1 1 1 0 Pilin accessory protein (PilO) CAP_N PF01213.19 NODE_64974_length_247_cov_3.042453_g57033_i0forward_frame_1 - 9.8 5.6 15.2 10 5.5 15.2 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF697 PF05128.12 NODE_64973_length_247_cov_3.047170_g57032_i0forward_frame_1 - 6.3e-24 84.5 0.0 6.8e-24 84.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF697) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks321.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks321.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks321.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks321.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:07 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PA PF02225.22 NODE_64968_length_247_cov_3.490566_g57027_i0forward_frame_1 - 1.9e-08 34.2 0.0 2.1e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 PA domain DUF2865 PF11064.8 NODE_64964_length_247_cov_4.094340_g57023_i0forward_frame_1 - 0.096 13.1 0.1 0.11 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2865) CNOT11 PF10155.9 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_1 - 0.023 14.9 7.3 0.36 11.0 1.8 2.8 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 11 DUF1272 PF06906.11 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_1 - 0.42 10.7 2.7 0.97 9.6 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) DUF325 PF03804.13 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_1 - 0.46 10.5 10.3 1.9 8.6 2.7 2.8 1 1 2 3 3 3 0 Viral proteins of unknown function EMI PF07546.13 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_1 - 4.6 8.1 11.0 7.1 7.5 3.5 2.1 1 1 1 2 2 2 0 EMI domain Retinal PF15449.6 NODE_64950_length_247_cov_36.183962_g57009_i0reverse_frame_1 - 1 7.0 11.0 1.1 7.0 11.0 1.0 1 0 0 1 1 1 0 Retinal protein CHCH PF06747.13 NODE_64947_length_247_cov_40.584906_g57006_i0forward_frame_1 - 0.0011 19.1 5.5 0.0011 19.1 5.5 1.5 2 0 0 2 2 2 1 CHCH domain NAR2 PF16974.5 NODE_64947_length_247_cov_40.584906_g57006_i0forward_frame_1 - 0.05 13.0 0.6 0.053 12.9 0.6 1.1 1 0 0 1 1 1 0 High-affinity nitrate transporter accessory CX9C PF16860.5 NODE_64947_length_247_cov_40.584906_g57006_i0forward_frame_1 - 0.13 12.3 5.1 0.48 10.5 0.9 2.2 1 1 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, SH3_6 PF12913.7 NODE_64946_length_247_cov_40.745283_g57005_i0reverse_frame_1 - 0.19 11.3 0.4 0.56 9.8 0.1 1.8 2 0 0 2 2 2 0 SH3 domain (SH3b1 type) YlaH PF14036.6 NODE_64944_length_247_cov_43.367925_g57003_i0forward_frame_1 - 0.096 13.0 5.1 0.13 12.6 5.1 1.3 1 0 0 1 1 1 0 YlaH-like protein DAN PF03045.15 NODE_64937_length_247_cov_53.698113_g56996_i0reverse_frame_1 - 0.4 10.7 3.7 0.53 10.3 3.7 1.4 1 1 0 1 1 1 0 DAN domain Defensin_2 PF01097.18 NODE_64936_length_247_cov_55.245283_g56995_i0forward_frame_1 - 0.017 15.0 1.6 0.017 15.0 1.6 1.8 2 0 0 2 2 2 0 Arthropod defensin CDP-OH_P_tran_2 PF08009.11 NODE_64935_length_247_cov_56.221698_g56994_i0reverse_frame_1 - 0.6 10.1 6.5 1.4 8.9 6.5 1.6 1 1 0 1 1 1 0 CDP-alcohol phosphatidyltransferase 2 DUF2830 PF11125.8 NODE_64931_length_247_cov_60.273585_g56990_i0forward_frame_1 - 0.59 10.2 5.0 0.16 12.0 1.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2830) Fer4_2 PF12797.7 NODE_64930_length_247_cov_61.660377_g56989_i0forward_frame_1 - 0.85 9.9 8.9 0.4 10.9 1.3 2.4 2 1 0 2 2 2 0 4Fe-4S binding domain Rpr2 PF04032.16 NODE_64930_length_247_cov_61.660377_g56989_i0forward_frame_1 - 1.4 9.2 6.3 0.74 10.1 2.1 2.0 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain FAM178 PF14816.6 NODE_64927_length_247_cov_64.358491_g56986_i0reverse_frame_1 - 0.049 12.6 0.1 0.055 12.4 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function, FAM178 AmiS_UreI PF02293.15 NODE_64924_length_247_cov_66.094340_g56983_i0reverse_frame_1 - 0.095 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 AmiS/UreI family transporter DUF4637 PF15470.6 NODE_64923_length_247_cov_71.056604_g56982_i0reverse_frame_1 - 0.15 11.8 2.3 0.17 11.6 2.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) GT-D PF08759.11 NODE_64919_length_247_cov_75.433962_g56978_i0reverse_frame_1 - 0.00024 20.8 0.0 0.00028 20.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase GT-D fold PRIMA1 PF16101.5 NODE_64918_length_247_cov_81.783019_g56977_i0forward_frame_1 - 0.23 11.5 7.8 0.25 11.4 7.8 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Mito_fiss_reg PF05308.11 NODE_64918_length_247_cov_81.783019_g56977_i0forward_frame_1 - 7.7 6.5 5.1 8.1 6.4 5.1 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator HTH_36 PF13730.6 NODE_64911_length_247_cov_125.386792_g56970_i0reverse_frame_1 - 0.091 12.7 0.5 0.12 12.4 0.5 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DB PF01682.19 NODE_64911_length_247_cov_125.386792_g56970_i0forward_frame_1 - 0.054 13.8 5.8 0.059 13.7 5.8 1.0 1 0 0 1 1 1 0 DB module DUF2633 PF11119.8 NODE_64903_length_247_cov_653.905660_g56962_i0reverse_frame_1 - 0.18 11.7 3.2 0.29 11.1 3.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Mem_trans PF03547.18 NODE_64901_length_247_cov_5245.358491_g56960_i0forward_frame_1 - 0.00014 20.4 1.0 0.00016 20.2 1.0 1.1 1 0 0 1 1 1 1 Membrane transport protein ApoC-I PF04691.12 NODE_64900_length_247_cov_50511.400943_g56959_i0forward_frame_1 - 0.091 12.7 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 Apolipoprotein C-I (ApoC-1) Hfq PF17209.3 NODE_64899_length_248_cov_0.751174_g56958_i0forward_frame_1 - 0.18 11.4 0.0 0.3 10.7 0.0 1.3 1 0 0 1 1 1 0 Hfq protein Oxidored-like PF09791.9 NODE_64896_length_248_cov_0.924883_g56955_i0forward_frame_1 - 0.14 11.8 2.7 3.5 7.4 0.1 2.3 1 1 1 2 2 2 0 Oxidoreductase-like protein, N-terminal LCIB_C_CA PF18599.1 NODE_64894_length_248_cov_0.938967_g56953_i0reverse_frame_1 - 0.017 14.5 0.0 0.02 14.2 0.0 1.1 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases DUF4667 PF15700.5 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_1 - 0.055 13.6 9.7 0.061 13.4 9.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4667) DUF1072 PF06380.11 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.047 13.6 1.1 0.068 13.0 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) SDA1 PF05285.12 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.067 12.6 5.9 0.056 12.9 5.9 1.0 1 0 0 1 1 1 0 SDA1 CENP-B_dimeris PF09026.10 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.089 13.2 19.7 0.1 13.0 19.7 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain BUD22 PF09073.10 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.11 11.8 3.9 0.091 12.1 3.9 1.0 1 0 0 1 1 1 0 BUD22 Sporozoite_P67 PF05642.11 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 0.22 9.6 4.2 0.23 9.5 4.2 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen GCIP PF13324.6 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 1.6 8.3 8.4 1.7 8.2 8.4 1.2 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting TRAP_alpha PF03896.16 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 2 7.6 4.3 2.1 7.5 4.3 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit eIF-3c_N PF05470.12 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 2.4 6.4 5.0 2.4 6.4 5.0 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus RXT2_N PF08595.11 NODE_64881_length_248_cov_1.136150_g56940_i0forward_frame_1 - 3 7.9 10.1 3.2 7.8 10.1 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal GCHY-1 PF02649.14 NODE_64876_length_248_cov_1.262911_g56935_i0reverse_frame_1 - 0.18 11.3 0.0 0.21 11.1 0.0 1.0 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 FAM70 PF14967.6 NODE_64876_length_248_cov_1.262911_g56935_i0forward_frame_1 - 0.12 11.8 2.3 0.11 11.9 2.3 1.1 1 0 0 1 1 1 0 FAM70 protein PAD_N PF08526.10 NODE_64872_length_248_cov_1.295775_g56931_i0reverse_frame_1 - 0.084 13.3 0.3 0.092 13.1 0.3 1.2 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) N-terminal domain 7TM_GPCR_Sru PF10322.9 NODE_64870_length_248_cov_1.309859_g56929_i0reverse_frame_1 - 0.026 13.9 0.4 0.031 13.6 0.4 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru RINT1_TIP1 PF04437.13 NODE_64867_length_248_cov_1.314554_g56926_i0forward_frame_1 - 0.038 12.9 0.1 0.038 12.9 0.1 1.0 1 0 0 1 1 1 0 RINT-1 / TIP-1 family FYDLN_acid PF09538.10 NODE_64863_length_248_cov_1.394366_g56922_i0reverse_frame_1 - 0.033 14.9 1.7 0.043 14.5 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) Pap_E4 PF02711.14 NODE_64863_length_248_cov_1.394366_g56922_i0reverse_frame_1 - 2.1 9.4 12.2 0.92 10.5 9.7 1.6 1 1 1 2 2 2 0 E4 protein LAT PF15234.6 NODE_64863_length_248_cov_1.394366_g56922_i0forward_frame_1 - 3.7 7.2 4.0 3.9 7.1 4.0 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells TEBP_beta PF07404.11 NODE_64862_length_248_cov_1.399061_g56921_i0reverse_frame_1 - 0.021 14.2 1.2 0.021 14.2 1.2 1.1 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) LAGLIDADG_1 PF00961.19 NODE_64856_length_248_cov_1.478873_g56915_i0forward_frame_1 - 0.024 15.6 0.2 0.03 15.3 0.2 1.1 1 0 0 1 1 1 0 LAGLIDADG endonuclease PEHE PF15275.6 NODE_64855_length_248_cov_1.478873_g56914_i0reverse_frame_1 - 0.045 14.4 0.2 0.047 14.3 0.2 1.1 1 0 0 1 1 1 0 PEHE domain TSR PF18487.1 NODE_64854_length_248_cov_1.483568_g56913_i0reverse_frame_1 - 0.052 13.8 0.0 0.073 13.3 0.0 1.2 1 0 0 1 1 1 0 Thrombospondin type 1 repeat MIT PF04212.18 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.0022 18.0 3.4 0.0027 17.8 3.2 1.3 1 1 0 1 1 1 1 MIT (microtubule interacting and transport) domain TMF_DNA_bd PF12329.8 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.013 15.5 6.5 0.013 15.5 6.5 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Phage_GP20 PF06810.11 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.014 15.2 9.9 0.017 14.9 9.9 1.1 1 0 0 1 1 1 0 Phage minor structural protein GP20 DUF334 PF03904.13 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.022 14.3 9.9 0.027 14.0 9.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) Calpain_inhib PF00748.19 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.031 14.8 1.8 0.034 14.6 1.8 1.1 1 0 0 1 1 1 0 Calpain inhibitor PP2C_C PF07830.13 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.058 13.9 2.0 0.058 13.9 2.0 1.7 1 1 1 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain HAUS6_N PF14661.6 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.1 12.2 5.4 0.11 12.0 5.4 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Mod_r PF07200.13 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.11 12.6 8.2 0.066 13.3 2.1 1.8 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Prominin PF05478.11 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.14 10.1 5.2 0.15 10.0 5.2 1.0 1 0 0 1 1 1 0 Prominin LMBR1 PF04791.16 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.43 9.4 4.4 0.47 9.3 4.4 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4446 PF14584.6 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.54 10.2 5.7 0.68 9.9 5.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF4407 PF14362.6 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.58 9.5 3.4 0.63 9.3 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YabA PF06156.13 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 0.61 10.7 8.2 0.24 12.0 2.1 2.0 1 1 1 2 2 2 0 Initiation control protein YabA Iron_permease PF04120.12 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 1.5 8.6 6.3 3 7.6 6.3 1.5 1 1 0 1 1 1 0 Low affinity iron permease DUF4145 PF13643.6 NODE_64851_length_248_cov_1.492958_g56910_i0reverse_frame_1 - 4.9 7.3 6.3 73 3.6 6.3 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4145) Nitroreductase PF00881.24 NODE_64844_length_248_cov_1.535211_g56903_i0forward_frame_1 - 0.098 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Nitroreductase family YmgB PF10798.8 NODE_64843_length_248_cov_1.563380_g56902_i0reverse_frame_1 - 0.038 13.8 0.4 0.072 12.9 0.4 1.5 1 0 0 1 1 1 0 Biofilm development protein YmgB/AriR WGG PF10273.9 NODE_64843_length_248_cov_1.563380_g56902_i0reverse_frame_1 - 0.14 12.8 0.4 2.1 9.1 0.4 2.0 1 1 0 1 1 1 0 Pre-rRNA-processing protein TSR2 GP3_package PF16677.5 NODE_64838_length_248_cov_1.624413_g56897_i0forward_frame_1 - 0.11 12.6 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 DNA-packaging protein gp3 Maf_N PF08383.11 NODE_64837_length_248_cov_1.624413_g56896_i0forward_frame_1 - 0.18 11.6 0.0 0.24 11.2 0.0 1.2 1 0 0 1 1 1 0 Maf N-terminal region DUF2357 PF09823.9 NODE_64825_length_248_cov_1.779343_g56884_i0reverse_frame_1 - 0.11 11.7 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2357) Guanylate_cyc_2 PF09778.9 NODE_64822_length_248_cov_1.807512_g56881_i0reverse_frame_1 - 0.044 13.2 0.1 0.046 13.1 0.1 1.0 1 0 0 1 1 1 0 Guanylylate cyclase RIFIN PF02009.16 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_1 - 1.5 8.6 8.9 1.6 8.5 8.9 1.0 1 0 0 1 1 1 0 Rifin Promethin PF16015.5 NODE_64820_length_248_cov_1.812207_g56879_i0forward_frame_1 - 1.6 8.7 24.1 2.2 8.2 24.1 1.2 1 0 0 1 1 1 0 Promethin DUF2563 PF10817.8 NODE_64817_length_248_cov_1.826291_g56876_i0reverse_frame_1 - 0.0032 18.1 0.3 0.0038 17.8 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2563) DUF4255 PF14065.6 NODE_64808_length_248_cov_2.051643_g56867_i0reverse_frame_1 - 0.11 12.2 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4255) PUB PF09409.10 NODE_64806_length_248_cov_2.061033_g56865_i0reverse_frame_1 - 0.02 14.8 0.1 0.032 14.2 0.1 1.3 1 0 0 1 1 1 0 PUB domain Sec1 PF00995.23 NODE_64804_length_248_cov_2.098592_g56863_i0forward_frame_1 - 0.0015 17.9 0.1 0.0017 17.7 0.1 1.1 1 0 0 1 1 1 1 Sec1 family DUF2614 PF11023.8 NODE_64801_length_248_cov_2.150235_g56860_i0reverse_frame_1 - 0.33 11.0 5.5 0.36 11.0 5.5 1.0 1 0 0 1 1 1 0 Zinc-ribbon containing domain Leader_Trp PF08255.11 NODE_64799_length_248_cov_2.154930_g56858_i0reverse_frame_1 - 0.084 12.9 1.8 0.084 12.9 1.8 2.7 4 0 0 4 4 4 0 Trp-operon Leader Peptide GerPB PF10803.8 NODE_64797_length_248_cov_2.187793_g56856_i0reverse_frame_1 - 0.0038 17.3 0.0 0.0072 16.4 0.0 1.4 1 0 0 1 1 1 1 Spore germination GerPB UbiA PF01040.18 NODE_64787_length_248_cov_2.305164_g56846_i0reverse_frame_1 - 0.05 12.9 4.2 0.06 12.6 4.2 1.2 1 0 0 1 1 1 0 UbiA prenyltransferase family XhlA PF10779.9 NODE_64783_length_248_cov_2.413146_g56842_i0forward_frame_1 - 0.19 12.0 0.4 0.26 11.5 0.4 1.2 1 0 0 1 1 1 0 Haemolysin XhlA Prok-E2_D PF14460.6 NODE_64776_length_248_cov_2.516432_g56835_i0reverse_frame_1 - 0.055 13.1 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family D Cas_CT1975 PF09344.10 NODE_64769_length_248_cov_2.638498_g56828_i0forward_frame_1 - 0.11 12.0 0.2 0.13 11.7 0.2 1.0 1 0 0 1 1 1 0 CT1975-like protein RCC1_2 PF13540.6 NODE_64762_length_248_cov_2.934272_g56821_i0reverse_frame_1 - 6.8e-06 25.7 0.9 0.063 13.1 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Gifsy-2 PF13856.6 NODE_64756_length_248_cov_3.230047_g56815_i0forward_frame_1 - 0.13 12.6 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 ATP-binding sugar transporter from pro-phage DUF5086 PF16985.5 NODE_64750_length_248_cov_3.502347_g56809_i0reverse_frame_1 - 0.097 12.6 0.3 0.1 12.5 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5086) YyzF PF14116.6 NODE_64742_length_248_cov_26.089202_g56801_i0reverse_frame_1 - 0.12 12.4 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 YyzF-like protein DUF1980 PF09323.10 NODE_64742_length_248_cov_26.089202_g56801_i0forward_frame_1 - 0.16 11.9 3.5 0.19 11.6 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF489 PF04356.12 NODE_64738_length_248_cov_35.629108_g56797_i0reverse_frame_1 - 0.029 14.4 0.4 0.032 14.2 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF489) NRDD PF13597.6 NODE_64737_length_248_cov_37.591549_g56796_i0reverse_frame_1 - 2.6 6.7 7.5 2.7 6.7 7.5 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase Tape_meas_lam_C PF09718.10 NODE_64733_length_248_cov_41.873239_g56792_i0reverse_frame_1 - 0.017 15.2 2.1 0.19 11.9 1.8 2.1 1 1 1 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) Ldl_recept_a PF00057.18 NODE_64730_length_248_cov_45.981221_g56789_i0forward_frame_1 - 0.048 13.9 0.8 0.088 13.0 0.8 1.4 1 0 0 1 1 1 0 Low-density lipoprotein receptor domain class A zf-Sec23_Sec24 PF04810.15 NODE_64728_length_248_cov_47.342723_g56787_i0forward_frame_1 - 0.039 14.0 0.5 0.065 13.3 0.5 1.4 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger TPR_4 PF07721.14 NODE_64725_length_248_cov_49.610329_g56784_i0reverse_frame_1 - 0.017 15.7 1.9 0.051 14.2 1.9 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat Chordopox_RPO7 PF05864.12 NODE_64724_length_248_cov_49.863850_g56783_i0forward_frame_1 - 0.026 14.8 0.1 0.039 14.2 0.1 1.3 1 0 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) zf-C2H2_11 PF16622.5 NODE_64718_length_248_cov_60.154930_g56777_i0reverse_frame_1 - 0.057 13.2 0.5 4.9 7.0 0.2 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type Bystin PF05291.11 NODE_64718_length_248_cov_60.154930_g56777_i0forward_frame_1 - 0.11 11.8 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Bystin Haemocyan_bet_s PF14830.6 NODE_64715_length_248_cov_63.760563_g56774_i0forward_frame_1 - 0.018 15.0 0.0 0.023 14.7 0.0 1.1 1 0 0 1 1 1 0 Haemocyanin beta-sandwich SGP PF17228.2 NODE_64711_length_248_cov_66.915493_g56770_i0forward_frame_1 - 0.0046 17.8 0.4 0.0053 17.6 0.4 1.2 1 0 0 1 1 1 1 Sulphur globule protein PRA1 PF03208.19 NODE_64708_length_248_cov_70.478873_g56767_i0forward_frame_1 - 0.012 15.2 1.7 0.014 15.0 1.7 1.0 1 0 0 1 1 1 0 PRA1 family protein CSD PF00313.22 NODE_64699_length_248_cov_90.413146_g56758_i0reverse_frame_1 - 3.2e-05 23.7 0.0 3.6e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain Keratin_2_head PF16208.5 NODE_64697_length_248_cov_96.159624_g56756_i0forward_frame_1 - 0.58 10.3 14.9 0.63 10.2 14.9 1.1 1 0 0 1 1 1 0 Keratin type II head DUF4215 PF13948.6 NODE_64695_length_248_cov_98.239437_g56754_i0forward_frame_1 - 2.5e-09 37.4 11.2 2.5e-09 37.4 11.2 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4215) PMT_4TMC PF16192.5 NODE_64694_length_248_cov_107.737089_g56753_i0forward_frame_1 - 0.13 11.8 7.6 0.18 11.4 7.6 1.1 1 0 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase ATG27 PF09451.10 NODE_64691_length_248_cov_115.901408_g56750_i0forward_frame_1 - 0.0069 16.3 0.0 0.0079 16.1 0.0 1.1 1 0 0 1 1 1 1 Autophagy-related protein 27 Man-6-P_recep PF02157.15 NODE_64691_length_248_cov_115.901408_g56750_i0forward_frame_1 - 0.14 11.2 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate receptor NodZ PF05830.11 NODE_64684_length_248_cov_160.478873_g56743_i0forward_frame_1 - 0.069 11.9 0.1 0.073 11.9 0.1 1.1 1 0 0 1 1 1 0 Nodulation protein Z (NodZ) DUF2207 PF09972.9 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_1 - 0.3 9.8 8.0 0.32 9.7 8.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Shisa PF13908.6 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_1 - 0.74 10.0 4.0 0.82 9.9 4.0 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Ac81 PF05820.11 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_1 - 7.7 6.0 16.2 8.4 5.9 16.2 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 UNC119_bdg PF15435.6 NODE_64675_length_248_cov_6349.215962_g56734_i0reverse_frame_1 - 0.0022 17.6 0.2 0.0025 17.4 0.2 1.1 1 0 0 1 1 1 1 UNC119-binding protein C5orf30 homologue XPB_DRD PF18458.1 NODE_64673_length_248_cov_26020.586854_g56732_i0reverse_frame_1 - 0.2 11.6 0.2 0.3 11.0 0.2 1.3 1 0 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain RNHCP PF12647.7 NODE_64671_length_248_cov_72524.000000_g56730_i0reverse_frame_1 - 0.034 14.1 1.2 0.037 14.0 0.4 1.5 1 1 0 1 1 1 0 RNHCP domain Paxillin PF03535.13 NODE_64671_length_248_cov_72524.000000_g56730_i0reverse_frame_1 - 0.077 12.9 0.1 0.082 12.8 0.1 1.0 1 0 0 1 1 1 0 Paxillin family DUF2559 PF10832.8 NODE_64666_length_249_cov_1.093458_g56725_i0forward_frame_1 - 0.36 10.9 7.6 0.67 10.1 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2559) FANCL_C PF11793.8 NODE_64665_length_249_cov_1.112150_g56724_i0reverse_frame_1 - 0.028 14.6 1.5 0.033 14.3 1.5 1.1 1 0 0 1 1 1 0 FANCL C-terminal domain NdhL PF10716.9 NODE_64665_length_249_cov_1.112150_g56724_i0reverse_frame_1 - 0.032 14.2 4.6 0.051 13.5 4.6 1.4 1 1 0 1 1 1 0 NADH dehydrogenase transmembrane subunit Kinesin PF00225.23 NODE_64659_length_249_cov_1.130841_g56718_i0reverse_frame_1 - 8.9e-25 87.3 1.2 9.6e-25 87.2 1.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Pkinase PF00069.25 NODE_64656_length_249_cov_1.233645_g56715_i0reverse_frame_1 - 1.5e-10 40.9 0.0 1.6e-10 40.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_64656_length_249_cov_1.233645_g56715_i0reverse_frame_1 - 0.00025 20.4 0.0 0.00026 20.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1295 PF06966.12 NODE_64655_length_249_cov_1.308411_g56714_i0forward_frame_1 - 0.096 12.2 0.1 0.12 11.9 0.1 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1295) Scm3 PF10384.9 NODE_64653_length_249_cov_1.397196_g56712_i0forward_frame_1 - 0.37 10.6 2.4 1.3 8.8 0.7 2.2 2 0 0 2 2 2 0 Centromere protein Scm3 DUF2173 PF09941.9 NODE_64652_length_249_cov_1.397196_g56711_i0reverse_frame_1 - 0.18 12.2 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2173) Ribosomal_S19e PF01090.19 NODE_64650_length_249_cov_1.434579_g56709_i0reverse_frame_1 - 0.013 15.2 0.2 0.014 15.1 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein S19e Peptidase_M49 PF03571.15 NODE_64650_length_249_cov_1.434579_g56709_i0forward_frame_1 - 0.14 10.5 0.0 0.16 10.3 0.0 1.0 1 0 0 1 1 1 0 Peptidase family M49 CLN3 PF02487.17 NODE_64649_length_249_cov_1.457944_g56708_i0forward_frame_1 - 5e-05 22.5 2.4 5.1e-05 22.5 2.4 1.0 1 0 0 1 1 1 1 CLN3 protein Halogen_Hydrol PF10112.9 NODE_64649_length_249_cov_1.457944_g56708_i0forward_frame_1 - 0.4 10.7 2.2 0.46 10.5 2.2 1.0 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein LapA_dom PF06305.11 NODE_64649_length_249_cov_1.457944_g56708_i0forward_frame_1 - 2.3 8.1 4.6 5.1 7.0 4.6 1.7 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain GlgS PF08971.11 NODE_64644_length_249_cov_1.471963_g56703_i0forward_frame_1 - 0.13 12.3 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Glycogen synthesis protein DUF4719 PF15843.5 NODE_64643_length_249_cov_1.481308_g56702_i0forward_frame_1 - 0.012 15.7 0.9 0.016 15.4 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) CBM_14 PF01607.24 NODE_64639_length_249_cov_1.495327_g56698_i0forward_frame_1 - 0.15 12.2 5.8 0.28 11.4 1.7 2.8 2 1 1 3 3 3 0 Chitin binding Peritrophin-A domain CLTH PF10607.9 NODE_64635_length_249_cov_1.546729_g56694_i0reverse_frame_1 - 0.096 12.6 0.3 0.11 12.3 0.3 1.1 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain Dicty_CTDC PF00526.18 NODE_64632_length_249_cov_1.602804_g56691_i0forward_frame_1 - 0.25 11.3 6.0 0.51 10.3 6.0 1.5 1 0 0 1 1 1 0 Dictyostelium (slime mold) repeat ASFV_J13L PF05568.11 NODE_64632_length_249_cov_1.602804_g56691_i0forward_frame_1 - 7.1 6.3 6.9 9.5 5.9 6.9 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Metallothio_6 PF05522.11 NODE_64628_length_249_cov_1.658879_g56687_i0forward_frame_1 - 3.6 8.2 15.1 0.63 10.6 9.3 2.2 1 1 1 2 2 2 0 Metallothionein Tub PF01167.18 NODE_64626_length_249_cov_1.668224_g56685_i0forward_frame_1 - 0.088 12.5 0.0 0.09 12.5 0.0 1.1 1 0 0 1 1 1 0 Tub family Methuselah_N PF06652.12 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_1 - 0.0045 16.9 4.5 0.0053 16.7 4.5 1.0 1 0 0 1 1 1 1 Methuselah N-terminus Meckelin PF09773.9 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_1 - 0.11 10.6 7.5 0.12 10.4 7.5 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) DUF4808 PF16066.5 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_1 - 3.3 8.3 5.9 3.7 8.1 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4808) DUF4094 PF13334.6 NODE_64616_length_249_cov_1.780374_g56675_i0reverse_frame_1 - 0.023 15.1 1.1 0.027 14.9 0.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) DUF3079 PF11278.8 NODE_64612_length_249_cov_1.817757_g56671_i0forward_frame_1 - 0.044 13.6 4.9 0.092 12.6 2.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3079) FYVE PF01363.21 NODE_64598_length_249_cov_1.953271_g56657_i0forward_frame_1 - 5.5e-06 26.4 14.2 7.4e-06 26.0 14.2 1.2 1 0 0 1 1 1 1 FYVE zinc finger Mob_synth_C PF06463.13 NODE_64596_length_249_cov_1.971963_g56655_i0reverse_frame_1 - 0.0077 16.2 3.3 0.0099 15.8 3.3 1.2 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Mvb12 PF09452.10 NODE_64595_length_249_cov_1.981308_g56654_i0reverse_frame_1 - 0.019 15.4 0.5 0.028 14.8 0.4 1.3 1 1 0 1 1 1 0 ESCRT-I subunit Mvb12 I_LWEQ PF01608.17 NODE_64595_length_249_cov_1.981308_g56654_i0reverse_frame_1 - 0.18 12.0 3.7 0.22 11.7 3.7 1.1 1 0 0 1 1 1 0 I/LWEQ domain HET-S PF17108.5 NODE_64594_length_249_cov_1.990654_g56653_i0forward_frame_1 - 0.00057 19.6 0.2 0.0011 18.7 0.2 1.4 1 0 0 1 1 1 1 N-terminal small S protein of HET, non-prionic zf-NOSIP PF15906.5 NODE_64579_length_249_cov_2.238318_g56638_i0reverse_frame_1 - 0.21 11.8 0.7 0.32 11.2 0.1 1.6 1 1 1 2 2 2 0 Zinc-finger of nitric oxide synthase-interacting protein RCC1_2 PF13540.6 NODE_64578_length_249_cov_2.252336_g56637_i0reverse_frame_1 - 6.4e-08 32.2 0.9 0.0089 15.8 0.3 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_64578_length_249_cov_2.252336_g56637_i0reverse_frame_1 - 0.00017 22.1 8.7 0.012 16.2 0.2 3.3 3 1 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat FNIP PF05725.12 NODE_64578_length_249_cov_2.252336_g56637_i0reverse_frame_1 - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 FNIP Repeat Toxin_35 PF10530.9 NODE_64575_length_249_cov_2.392523_g56634_i0reverse_frame_1 - 0.0058 16.6 1.6 0.0082 16.1 1.6 1.2 1 0 0 1 1 1 1 Toxin with inhibitor cystine knot ICK or Knottin scaffold Glyco_hydro_25 PF01183.20 NODE_64573_length_249_cov_2.411215_g56632_i0reverse_frame_1 - 4.6e-20 72.6 0.0 4.8e-20 72.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 MM_CoA_mutase PF01642.22 NODE_64571_length_249_cov_2.560748_g56630_i0reverse_frame_1 - 0.31 9.5 0.0 0.37 9.3 0.0 1.0 1 0 0 1 1 1 0 Methylmalonyl-CoA mutase AraC_N PF06719.13 NODE_64570_length_249_cov_2.584112_g56629_i0forward_frame_1 - 3.7e-14 52.6 0.2 4e-14 52.5 0.2 1.0 1 0 0 1 1 1 1 AraC-type transcriptional regulator N-terminus Pescadillo_N PF06732.11 NODE_64567_length_249_cov_2.663551_g56626_i0forward_frame_1 - 0.034 13.7 0.1 0.039 13.5 0.1 1.0 1 0 0 1 1 1 0 Pescadillo N-terminus Cornifin PF02389.15 NODE_64564_length_249_cov_2.747664_g56623_i0forward_frame_1 - 0.36 11.0 9.0 0.42 10.8 9.0 1.3 1 1 0 1 1 1 0 Cornifin (SPRR) family Papilloma_E5 PF03025.14 NODE_64559_length_249_cov_2.967290_g56618_i0forward_frame_1 - 6 7.1 14.7 2.3 8.5 5.4 2.1 1 1 1 2 2 2 0 Papillomavirus E5 DUF4637 PF15470.6 NODE_64557_length_249_cov_3.252336_g56616_i0reverse_frame_1 - 0.066 13.0 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) PID_2 PF14719.6 NODE_64555_length_249_cov_3.313084_g56614_i0reverse_frame_1 - 0.039 13.8 0.0 0.046 13.6 0.0 1.1 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) DUF5357 PF17310.2 NODE_64555_length_249_cov_3.313084_g56614_i0forward_frame_1 - 0.063 11.8 0.0 0.068 11.7 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) zf-C3HC4_5 PF17121.5 NODE_64547_length_249_cov_18.018692_g56606_i0reverse_frame_1 - 0.16 11.9 10.4 0.36 10.8 0.3 2.2 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) PDE6_gamma PF04868.12 NODE_64545_length_249_cov_21.757009_g56604_i0forward_frame_1 - 0.033 14.4 0.1 0.033 14.4 0.1 1.5 2 0 0 2 2 2 0 Retinal cGMP phosphodiesterase, gamma subunit NinE PF05322.11 NODE_64544_length_249_cov_22.434579_g56603_i0forward_frame_1 - 0.0016 18.3 0.8 0.0016 18.3 0.8 1.7 2 0 0 2 2 2 1 NINE Protein CSN5_C PF18323.1 NODE_64542_length_249_cov_24.985981_g56601_i0reverse_frame_1 - 0.023 15.6 1.3 0.029 15.3 1.3 1.2 1 0 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain LEP503 PF15221.6 NODE_64542_length_249_cov_24.985981_g56601_i0forward_frame_1 - 4.2 7.8 6.7 9.3 6.7 6.2 1.7 2 0 0 2 2 2 0 Lens epithelial cell protein LEP503 GAT PF03127.14 NODE_64540_length_249_cov_28.742991_g56599_i0forward_frame_1 - 0.029 14.7 2.5 3.8 7.9 0.5 2.1 1 1 1 2 2 2 0 GAT domain CCDC71L PF15374.6 NODE_64538_length_249_cov_36.897196_g56597_i0forward_frame_1 - 6 6.0 13.1 6.5 5.9 13.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 71L ParB PF08775.10 NODE_64536_length_249_cov_37.425234_g56595_i0forward_frame_1 - 0.0069 16.9 2.8 0.0074 16.8 2.8 1.1 1 0 0 1 1 1 1 ParB family DUF2628 PF10947.8 NODE_64533_length_249_cov_41.126168_g56592_i0forward_frame_1 - 3.7 8.0 6.2 4.1 7.8 5.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) Lipoprotein_20 PF13942.6 NODE_64532_length_249_cov_41.196262_g56591_i0reverse_frame_1 - 0.0097 15.8 0.1 0.011 15.6 0.1 1.1 1 0 0 1 1 1 1 YfhG lipoprotein LBP_C PF17386.2 NODE_64532_length_249_cov_41.196262_g56591_i0reverse_frame_1 - 0.057 13.3 0.0 0.078 12.9 0.0 1.3 1 0 0 1 1 1 0 Lacto-N-biose phosphorylase C-terminal domain DUF5435 PF17503.2 NODE_64530_length_249_cov_42.929907_g56589_i0forward_frame_1 - 0.46 10.2 2.9 0.55 9.9 2.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5435) DUF2706 PF10913.8 NODE_64529_length_249_cov_43.453271_g56588_i0reverse_frame_1 - 0.072 12.9 0.1 0.18 11.7 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2706) DUF1676 PF07898.13 NODE_64528_length_249_cov_44.121495_g56587_i0reverse_frame_1 - 0.065 13.3 0.1 0.077 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) Sre PF03125.18 NODE_64527_length_249_cov_46.560748_g56586_i0reverse_frame_1 - 0.066 12.3 7.3 0.072 12.2 7.3 1.0 1 0 0 1 1 1 0 C. elegans Sre G protein-coupled chemoreceptor Cadherin_C_2 PF16492.5 NODE_64524_length_249_cov_49.514019_g56583_i0forward_frame_1 - 0.026 15.3 0.4 0.034 14.9 0.4 1.3 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal LexA_DNA_bind PF01726.16 NODE_64524_length_249_cov_49.514019_g56583_i0forward_frame_1 - 0.14 11.9 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 LexA DNA binding domain DUF3410 PF11890.8 NODE_64523_length_249_cov_51.855140_g56582_i0forward_frame_1 - 0.038 13.8 0.2 0.041 13.7 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3410) bPH_3 PF14470.6 NODE_64520_length_249_cov_55.813084_g56579_i0reverse_frame_1 - 0.19 12.1 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial PH domain ATLF PF07737.11 NODE_64519_length_249_cov_57.149533_g56578_i0reverse_frame_1 - 0.013 14.8 0.4 0.014 14.7 0.4 1.0 1 0 0 1 1 1 0 Anthrax toxin lethal factor, N- and C-terminal domain SICA_beta PF12878.7 NODE_64519_length_249_cov_57.149533_g56578_i0reverse_frame_1 - 0.016 15.4 1.8 0.018 15.2 1.8 1.0 1 0 0 1 1 1 0 SICA extracellular beta domain DUF5550 PF17704.1 NODE_64518_length_249_cov_57.649533_g56577_i0reverse_frame_1 - 0.013 15.6 0.2 0.015 15.4 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5550) DUF2521 PF10730.9 NODE_64513_length_249_cov_69.242991_g56572_i0reverse_frame_1 - 0.082 12.9 0.1 0.14 12.2 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2521) Amidase PF01425.21 NODE_64510_length_249_cov_79.957944_g56569_i0reverse_frame_1 - 0.045 12.7 0.0 0.054 12.5 0.0 1.1 1 0 0 1 1 1 0 Amidase PsbP PF01789.16 NODE_64492_length_249_cov_150.350467_g56551_i0reverse_frame_1 - 0.0046 17.1 0.0 0.0051 17.0 0.0 1.1 1 0 0 1 1 1 1 PsbP CTX_RstB PF07459.11 NODE_64492_length_249_cov_150.350467_g56551_i0reverse_frame_1 - 0.0061 16.8 0.0 0.0073 16.5 0.0 1.2 1 0 0 1 1 1 1 CTX phage RstB protein AmpE PF17113.5 NODE_64490_length_249_cov_157.803738_g56549_i0forward_frame_1 - 0.013 14.8 0.0 0.086 12.2 0.0 1.8 1 1 1 2 2 2 0 Regulatory signalling modulator protein AmpE TILa PF12714.7 NODE_64483_length_249_cov_250.887850_g56542_i0reverse_frame_1 - 0.021 14.8 0.5 0.029 14.3 0.5 1.2 1 0 0 1 1 1 0 TILa domain 3HCDH_RFF PF18321.1 NODE_64474_length_250_cov_0.744186_g56533_i0reverse_frame_3 - 0.065 13.7 1.5 9 6.8 0.0 2.3 1 1 1 2 2 2 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain zf-3CxxC PF13695.6 NODE_64472_length_250_cov_0.823256_g56531_i0reverse_frame_3 - 0.0039 17.6 0.9 0.0045 17.4 0.9 1.1 1 0 0 1 1 1 1 Zinc-binding domain ABC_tran PF00005.27 NODE_64471_length_250_cov_0.837209_g56530_i0reverse_frame_2 - 0.0012 19.3 0.1 0.56 10.7 0.0 2.1 2 0 0 2 2 2 2 ABC transporter SbcCD_C PF13558.6 NODE_64471_length_250_cov_0.837209_g56530_i0reverse_frame_2 - 0.0076 16.5 0.0 0.018 15.3 0.0 1.6 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit GCM PF03615.15 NODE_64467_length_250_cov_0.916279_g56526_i0forward_frame_3 - 0.039 13.8 0.3 0.041 13.8 0.3 1.2 1 0 0 1 1 1 0 GCM motif protein STN1_2 PF09170.10 NODE_64466_length_250_cov_0.925581_g56525_i0reverse_frame_2 - 0.028 14.6 0.0 0.03 14.5 0.0 1.1 1 0 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 LRR_4 PF12799.7 NODE_64466_length_250_cov_0.925581_g56525_i0forward_frame_2 - 0.024 15.1 0.7 0.046 14.2 0.7 1.6 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) CHASE3 PF05227.13 NODE_64465_length_250_cov_0.930233_g56524_i0forward_frame_2 - 0.054 13.4 0.2 0.063 13.2 0.2 1.1 1 0 0 1 1 1 0 CHASE3 domain HTH_WhiA PF02650.14 NODE_64463_length_250_cov_1.037209_g56522_i0reverse_frame_3 - 0.12 12.7 0.1 0.16 12.4 0.1 1.3 1 1 0 1 1 1 0 WhiA C-terminal HTH domain BicD PF09730.9 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.026 13.0 0.4 0.027 12.9 0.4 1.0 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D DNA_repr_REX1B PF14966.6 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.043 14.5 0.2 0.75 10.5 0.0 2.0 1 1 1 2 2 2 0 DNA repair REX1-B Fib_alpha PF08702.10 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.047 13.9 0.5 0.054 13.7 0.5 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Prefoldin PF02996.17 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.048 13.6 0.9 0.17 11.8 0.4 1.9 1 1 1 2 2 2 0 Prefoldin subunit DUF3552 PF12072.8 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.056 12.8 0.0 0.058 12.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) YpjP PF14005.6 NODE_64462_length_250_cov_1.046512_g56521_i0reverse_frame_2 - 0.096 12.7 0.1 0.099 12.7 0.1 1.1 1 0 0 1 1 1 0 YpjP-like protein ParB PF08775.10 NODE_64461_length_250_cov_1.093023_g56520_i0reverse_frame_2 - 0.032 14.7 0.0 0.058 13.9 0.0 1.4 1 1 0 1 1 1 0 ParB family CAP160 PF07918.11 NODE_64461_length_250_cov_1.093023_g56520_i0reverse_frame_2 - 0.072 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 CAP160 repeat Ada_Zn_binding PF02805.16 NODE_64461_length_250_cov_1.093023_g56520_i0forward_frame_2 - 0.36 10.9 0.4 0.36 10.9 0.4 2.1 2 0 0 2 2 2 0 Metal binding domain of Ada DUF5516 PF17637.2 NODE_64458_length_250_cov_1.106977_g56517_i0reverse_frame_3 - 0.049 13.4 0.1 0.09 12.5 0.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5516) SelR PF01641.18 NODE_64457_length_250_cov_1.106977_g56516_i0reverse_frame_2 - 3.8e-11 43.1 0.2 8.8e-11 41.9 0.2 1.6 1 1 0 1 1 1 1 SelR domain Yippee-Mis18 PF03226.14 NODE_64457_length_250_cov_1.106977_g56516_i0reverse_frame_2 - 0.13 12.5 0.1 0.17 12.1 0.1 1.5 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF2046 PF09755.9 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.00064 19.1 0.2 0.00068 19.0 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) Tropomyosin_1 PF12718.7 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.0016 18.6 0.1 0.0018 18.5 0.1 1.1 1 0 0 1 1 1 1 Tropomyosin like bZIP_2 PF07716.15 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.0053 16.8 2.9 0.053 13.6 0.7 2.2 2 0 0 2 2 2 1 Basic region leucine zipper BLOC1_2 PF10046.9 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.0073 16.6 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 PspB PF06667.12 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.0075 16.3 0.2 0.045 13.8 0.1 2.0 2 0 0 2 2 2 1 Phage shock protein B PhoU PF01895.19 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.012 16.1 0.0 0.014 15.8 0.0 1.1 1 0 0 1 1 1 0 PhoU domain ZapB PF06005.12 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.022 15.2 3.4 0.036 14.5 3.3 1.3 1 1 0 1 1 1 0 Cell division protein ZapB DASH_Spc19 PF08287.11 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.022 14.6 0.7 0.026 14.4 0.7 1.2 1 0 0 1 1 1 0 Spc19 FliD_C PF07195.12 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.034 13.6 0.2 0.039 13.4 0.2 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus DUF4988 PF16378.5 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.038 13.7 0.0 0.044 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function Acetyltransf_11 PF13720.6 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.075 13.5 0.3 0.098 13.1 0.3 1.3 1 1 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CLZ PF16526.5 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.088 13.2 2.0 0.7 10.3 0.3 2.0 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HSCB_C PF07743.13 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.22 12.0 2.4 0.41 11.2 2.4 1.5 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain SlyX PF04102.12 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 0.33 11.6 6.3 0.75 10.5 6.3 1.7 1 1 0 1 1 1 0 SlyX FlxA PF14282.6 NODE_64456_length_250_cov_1.111628_g56515_i0forward_frame_3 - 7.9 6.5 12.8 12 6.0 8.7 2.0 1 1 1 2 2 2 0 FlxA-like protein RIF5_SNase_2 PF18189.1 NODE_64455_length_250_cov_1.111628_g56514_i0forward_frame_2 - 0.12 12.2 0.0 0.13 12.1 0.0 1.0 1 0 0 1 1 1 0 TbRIF5 SNase domain 2 Glyco_hydro_16 PF00722.21 NODE_64454_length_250_cov_1.111628_g56513_i0forward_frame_3 - 0.1 12.0 0.1 0.14 11.6 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 16 Plug_translocon PF10559.9 NODE_64453_length_250_cov_1.116279_g56512_i0forward_frame_3 - 0.11 12.4 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Plug domain of Sec61p DNA_pol_A_exoN PF18305.1 NODE_64446_length_250_cov_1.181395_g56505_i0forward_frame_3 - 0.16 12.3 0.0 0.2 12.0 0.0 1.1 1 0 0 1 1 1 0 3' to 5' exonuclease C-terminal domain zf-AN1 PF01428.16 NODE_64441_length_250_cov_1.288372_g56500_i0reverse_frame_3 - 0.66 10.2 0.1 0.66 10.2 0.1 2.8 3 0 0 3 3 3 0 AN1-like Zinc finger Tmemb_9 PF05434.11 NODE_64439_length_250_cov_1.302326_g56498_i0forward_frame_3 - 0.83 9.5 4.1 1 9.2 4.1 1.2 1 0 0 1 1 1 0 TMEM9 TMEM72 PF16054.5 NODE_64439_length_250_cov_1.302326_g56498_i0forward_frame_3 - 2 8.1 8.0 2.4 7.8 8.0 1.0 1 0 0 1 1 1 0 Transmembrane protein family 72 s48_45 PF07422.13 NODE_64436_length_250_cov_1.334884_g56495_i0reverse_frame_2 - 0.015 15.8 0.3 0.018 15.6 0.3 1.2 1 0 0 1 1 1 0 Sexual stage antigen s48/45 domain TMEM190 PF15431.6 NODE_64436_length_250_cov_1.334884_g56495_i0forward_frame_2 - 0.064 13.4 0.3 0.064 13.4 0.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 190 DUF1743 PF08489.11 NODE_64435_length_250_cov_1.358140_g56494_i0reverse_frame_2 - 0.12 12.5 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1743) FNIP_N PF14636.6 NODE_64434_length_250_cov_1.362791_g56493_i0forward_frame_3 - 0.18 12.8 3.0 0.29 12.1 3.0 1.3 1 1 0 1 1 1 0 Folliculin-interacting protein N-terminus DUF4046 PF13255.6 NODE_64431_length_250_cov_1.395349_g56490_i0forward_frame_3 - 0.067 13.8 0.1 0.072 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4046) DNA_pol_phi PF04931.13 NODE_64428_length_250_cov_1.469767_g56487_i0forward_frame_2 - 0.28 9.2 3.1 0.31 9.1 3.1 1.0 1 0 0 1 1 1 0 DNA polymerase phi CPCFC PF17223.3 NODE_64427_length_250_cov_1.488372_g56486_i0forward_frame_2 - 0.048 13.4 3.5 0.08 12.7 3.5 1.4 1 0 0 1 1 1 0 Cuticle protein CPCFC DUF3254 PF11630.8 NODE_64425_length_250_cov_1.502326_g56484_i0forward_frame_3 - 0.15 12.3 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3254) DUF2016 PF09436.10 NODE_64425_length_250_cov_1.502326_g56484_i0forward_frame_2 - 0.097 12.5 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) zf-primase PF09329.11 NODE_64420_length_250_cov_1.567442_g56479_i0reverse_frame_3 - 0.075 12.8 4.7 0.15 11.9 4.7 1.5 1 0 0 1 1 1 0 Primase zinc finger TMP-TENI PF02581.17 NODE_64420_length_250_cov_1.567442_g56479_i0forward_frame_3 - 0.16 11.2 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Thiamine monophosphate synthase BssC_TutF PF08201.11 NODE_64419_length_250_cov_1.576744_g56478_i0forward_frame_2 - 0.18 11.9 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 BssC/TutF protein DUF4538 PF15061.6 NODE_64416_length_250_cov_1.595349_g56475_i0forward_frame_2 - 0.49 10.2 2.5 7.6 6.4 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) COX14 PF14880.6 NODE_64416_length_250_cov_1.595349_g56475_i0forward_frame_2 - 7.3 6.5 5.8 2.4 8.0 1.0 2.1 2 0 0 2 2 2 0 Cytochrome oxidase c assembly Plasmid_parti PF01672.16 NODE_64409_length_250_cov_1.702326_g56468_i0reverse_frame_2 - 0.095 13.4 6.2 0.47 11.1 2.3 2.1 1 1 1 2 2 2 0 Putative plasmid partition protein Coilin_N PF15862.5 NODE_64406_length_250_cov_1.739535_g56465_i0reverse_frame_3 - 1.8 8.3 8.6 2.3 8.0 8.6 1.1 1 0 0 1 1 1 0 Coilin N-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks322.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks322.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks322.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks322.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Acatn PF13000.7 NODE_64403_length_250_cov_1.776744_g56462_i0forward_frame_3 - 0.087 11.3 0.9 0.1 11.1 0.9 1.0 1 0 0 1 1 1 0 Acetyl-coenzyme A transporter 1 PyrI_C PF02748.15 NODE_64403_length_250_cov_1.776744_g56462_i0forward_frame_2 - 0.1 12.5 2.3 0.16 11.9 1.2 1.8 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Bap31_Bap29_C PF18035.1 NODE_64401_length_250_cov_1.832558_g56460_i0forward_frame_2 - 0.01 15.8 2.9 0.014 15.4 2.9 1.2 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain Siah-Interact_N PF09032.11 NODE_64401_length_250_cov_1.832558_g56460_i0forward_frame_2 - 0.015 15.6 0.1 0.017 15.4 0.1 1.1 1 0 0 1 1 1 0 Siah interacting protein, N terminal EMP24_GP25L PF01105.24 NODE_64401_length_250_cov_1.832558_g56460_i0forward_frame_2 - 0.024 14.6 0.7 0.03 14.3 0.7 1.1 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD CENP-F_leu_zip PF10473.9 NODE_64401_length_250_cov_1.832558_g56460_i0forward_frame_2 - 0.027 14.5 2.2 0.034 14.2 2.2 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 NODE_64401_length_250_cov_1.832558_g56460_i0forward_frame_2 - 0.053 12.9 2.4 0.063 12.6 2.4 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Spc24 PF08286.11 NODE_64401_length_250_cov_1.832558_g56460_i0forward_frame_2 - 0.06 13.6 0.3 0.069 13.4 0.3 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DivIC PF04977.15 NODE_64401_length_250_cov_1.832558_g56460_i0forward_frame_2 - 0.14 11.9 1.6 0.18 11.6 1.6 1.1 1 0 0 1 1 1 0 Septum formation initiator FlaC_arch PF05377.11 NODE_64401_length_250_cov_1.832558_g56460_i0forward_frame_2 - 0.15 12.5 0.5 0.21 12.0 0.5 1.2 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF745 PF05335.13 NODE_64401_length_250_cov_1.832558_g56460_i0forward_frame_2 - 0.17 11.6 1.7 0.2 11.3 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) Tmemb_9 PF05434.11 NODE_64400_length_250_cov_1.832558_g56459_i0reverse_frame_2 - 0.14 12.1 1.9 0.23 11.3 1.9 1.4 1 0 0 1 1 1 0 TMEM9 DUF4590 PF15257.6 NODE_64397_length_250_cov_1.851163_g56456_i0reverse_frame_2 - 0.025 14.5 0.0 0.032 14.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4590) UreE_C PF05194.12 NODE_64391_length_250_cov_1.981395_g56450_i0forward_frame_3 - 0.16 12.5 0.0 0.2 12.2 0.0 1.2 1 0 0 1 1 1 0 UreE urease accessory protein, C-terminal domain FAD_binding_7 PF03441.14 NODE_64391_length_250_cov_1.981395_g56450_i0forward_frame_2 - 0.082 12.4 0.3 0.11 12.0 0.3 1.2 1 0 0 1 1 1 0 FAD binding domain of DNA photolyase Lamprin PF06403.11 NODE_64390_length_250_cov_2.018605_g56449_i0reverse_frame_3 - 1 9.3 5.2 1.5 8.8 5.2 1.5 1 1 0 1 1 1 0 Lamprin Herpes_US9 PF06072.11 NODE_64387_length_250_cov_2.065116_g56446_i0reverse_frame_3 - 4.5 7.2 7.0 1.9 8.5 3.7 1.9 1 1 1 2 2 2 0 Alphaherpesvirus tegument protein US9 YuiB PF14068.6 NODE_64387_length_250_cov_2.065116_g56446_i0forward_frame_2 - 0.2 12.3 6.5 0.3 11.7 6.5 1.3 1 0 0 1 1 1 0 Putative membrane protein Rad4 PF03835.15 NODE_64384_length_250_cov_2.144186_g56443_i0reverse_frame_3 - 0.19 11.4 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Rad4 transglutaminase-like domain TMEM154 PF15102.6 NODE_64384_length_250_cov_2.144186_g56443_i0forward_frame_2 - 0.0056 16.6 0.2 0.0063 16.4 0.2 1.1 1 0 0 1 1 1 1 TMEM154 protein family PRA1 PF03208.19 NODE_64384_length_250_cov_2.144186_g56443_i0forward_frame_2 - 0.04 13.5 0.3 0.044 13.4 0.3 1.0 1 0 0 1 1 1 0 PRA1 family protein Bac_luciferase PF00296.20 NODE_64383_length_250_cov_2.204651_g56442_i0forward_frame_3 - 0.022 14.2 0.1 0.028 13.9 0.1 1.0 1 0 0 1 1 1 0 Luciferase-like monooxygenase INSC_LBD PF16748.5 NODE_64372_length_250_cov_2.506977_g56431_i0reverse_frame_2 - 0.012 15.0 0.1 0.02 14.4 0.1 1.3 1 0 0 1 1 1 0 Inscuteable LGN-binding domain Synaptobrevin PF00957.21 NODE_64372_length_250_cov_2.506977_g56431_i0forward_frame_2 - 0.019 14.8 2.1 0.034 13.9 1.5 1.6 1 1 1 2 2 2 0 Synaptobrevin V-SNARE_C PF12352.8 NODE_64372_length_250_cov_2.506977_g56431_i0forward_frame_2 - 0.097 13.0 0.2 0.9 9.9 0.1 2.1 1 1 1 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus PIRT PF15099.6 NODE_64371_length_250_cov_2.511628_g56430_i0forward_frame_3 - 0.034 13.7 0.1 0.047 13.3 0.1 1.3 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family CoxIIa PF08113.11 NODE_64370_length_250_cov_2.516279_g56429_i0forward_frame_3 - 0.11 12.3 0.7 0.11 12.3 0.7 2.0 3 0 0 3 3 3 0 Cytochrome c oxidase subunit IIa family SPACA9 PF15120.6 NODE_64369_length_250_cov_2.530233_g56428_i0reverse_frame_2 - 0.08 12.7 0.0 0.092 12.5 0.0 1.1 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 DUF1658 PF07871.11 NODE_64369_length_250_cov_2.530233_g56428_i0reverse_frame_2 - 0.11 12.5 0.3 1 9.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) UPF0203 PF05254.12 NODE_64368_length_250_cov_2.548837_g56427_i0forward_frame_3 - 0.11 12.7 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF2120 PF09893.9 NODE_64365_length_250_cov_2.693023_g56424_i0reverse_frame_2 - 0.0036 17.4 0.1 0.0045 17.1 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2120) FERM_N PF09379.10 NODE_64365_length_250_cov_2.693023_g56424_i0reverse_frame_2 - 0.028 14.4 0.1 0.056 13.4 0.1 1.5 1 1 0 1 1 1 0 FERM N-terminal domain Spermine_synt_N PF17284.2 NODE_64365_length_250_cov_2.693023_g56424_i0forward_frame_3 - 0.048 13.6 0.4 0.071 13.0 0.4 1.3 1 0 0 1 1 1 0 Spermidine synthase tetramerisation domain MR_MLE_C PF13378.6 NODE_64361_length_250_cov_2.790698_g56420_i0reverse_frame_2 - 1.7e-11 44.1 0.0 1.9e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like Thioredoxin_2 PF13098.6 NODE_64360_length_250_cov_2.879070_g56419_i0forward_frame_2 - 0.0025 18.2 0.0 0.003 18.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain P22_AR_C PF10548.9 NODE_64360_length_250_cov_2.879070_g56419_i0forward_frame_2 - 0.098 12.8 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 P22AR C-terminal domain QSOX_Trx1 PF18108.1 NODE_64360_length_250_cov_2.879070_g56419_i0forward_frame_2 - 0.1 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 QSOX Trx-like domain DUF2256 PF10013.9 NODE_64358_length_250_cov_2.902326_g56417_i0reverse_frame_3 - 0.064 13.4 0.3 0.11 12.6 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF1819 PF08849.11 NODE_64357_length_250_cov_3.079070_g56416_i0forward_frame_3 - 0.084 12.7 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Putative inner membrane protein (DUF1819) PMP1_2 PF08114.11 NODE_64356_length_250_cov_3.125581_g56415_i0forward_frame_3 - 0.28 11.0 1.6 0.59 9.9 1.6 1.6 1 1 0 1 1 1 0 ATPase proteolipid family HTH_Tnp_Tc5 PF03221.16 NODE_64351_length_250_cov_3.260465_g56410_i0forward_frame_3 - 0.11 12.5 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain Gln-synt_N PF03951.19 NODE_64348_length_250_cov_3.311628_g56407_i0forward_frame_3 - 2.8e-09 36.6 0.1 3.1e-09 36.4 0.1 1.1 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain TTL PF03133.15 NODE_64347_length_250_cov_3.418605_g56406_i0reverse_frame_2 - 9.9e-28 97.1 0.5 1e-27 97.1 0.5 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family TetR_C_29 PF17938.1 NODE_64344_length_250_cov_4.116279_g56403_i0reverse_frame_3 - 1.8e-17 63.5 0.0 2e-17 63.4 0.0 1.0 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain TetR_C_4 PF08359.11 NODE_64344_length_250_cov_4.116279_g56403_i0reverse_frame_3 - 0.051 13.7 0.0 0.07 13.3 0.0 1.2 1 0 0 1 1 1 0 YsiA-like protein, C-terminal region Gpi1 PF05024.15 NODE_64344_length_250_cov_4.116279_g56403_i0reverse_frame_3 - 0.093 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 N-acetylglucosaminyl transferase component (Gpi1) HNH PF01844.23 NODE_64343_length_250_cov_4.539535_g56402_i0reverse_frame_3 - 0.018 15.2 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 HNH endonuclease Lipocalin_5 PF13924.6 NODE_64342_length_250_cov_4.841860_g56401_i0forward_frame_2 - 0.034 13.9 0.0 0.038 13.8 0.0 1.1 1 0 0 1 1 1 0 Lipocalin-like domain RabGAP-TBC PF00566.18 NODE_64341_length_250_cov_7.893023_g56400_i0forward_frame_2 - 3.8e-09 36.5 2.8 4.5e-09 36.3 2.8 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF390 PF04094.14 NODE_64338_length_250_cov_23.009302_g56397_i0forward_frame_2 - 0.085 11.1 4.8 0.085 11.1 4.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) Pkinase PF00069.25 NODE_64334_length_250_cov_32.362791_g56393_i0forward_frame_3 - 0.00038 19.9 1.7 0.00045 19.7 1.7 1.1 1 0 0 1 1 1 1 Protein kinase domain HHH_3 PF12836.7 NODE_64334_length_250_cov_32.362791_g56393_i0forward_frame_3 - 0.039 14.2 0.1 0.052 13.8 0.1 1.3 1 0 0 1 1 1 0 Helix-hairpin-helix motif LYRIC PF15686.5 NODE_64331_length_250_cov_36.869767_g56390_i0reverse_frame_3 - 0.98 8.9 9.7 1.2 8.6 9.7 1.0 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family nos_propeller PF18764.1 NODE_64331_length_250_cov_36.869767_g56390_i0reverse_frame_2 - 0.045 13.7 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Nitrous oxide reductase propeller repeat DUF2072 PF09845.9 NODE_64331_length_250_cov_36.869767_g56390_i0reverse_frame_2 - 1.3 9.3 9.1 0.17 12.2 5.1 1.5 2 0 0 2 2 2 0 Zn-ribbon containing protein GCP5-Mod21 PF14609.6 NODE_64330_length_250_cov_38.525581_g56389_i0forward_frame_2 - 0.066 11.5 0.6 0.07 11.5 0.6 1.1 1 0 0 1 1 1 0 gamma-Tubulin ring complex non-core subunit mod21 YjhX_toxin PF09857.9 NODE_64327_length_250_cov_42.232558_g56386_i0reverse_frame_2 - 0.053 13.5 0.6 2.3 8.2 0.0 2.1 1 1 1 2 2 2 0 Putative toxin of bacterial toxin-antitoxin pair Lectin_N PF03954.14 NODE_64327_length_250_cov_42.232558_g56386_i0reverse_frame_2 - 0.096 12.4 0.1 0.099 12.4 0.1 1.1 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain SgrT PF15894.5 NODE_64320_length_250_cov_55.297674_g56379_i0forward_frame_2 - 0.012 15.5 0.2 0.019 14.9 0.2 1.3 1 0 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT Stealth_CR3 PF17102.5 NODE_64320_length_250_cov_55.297674_g56379_i0forward_frame_2 - 0.023 14.6 0.0 0.032 14.1 0.0 1.2 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 Fanconi_A PF03511.14 NODE_64313_length_250_cov_68.655814_g56372_i0forward_frame_3 - 0.057 13.3 0.1 0.094 12.6 0.1 1.3 1 0 0 1 1 1 0 Fanconi anaemia group A protein RRP14 PF15459.6 NODE_64309_length_250_cov_74.586047_g56368_i0reverse_frame_2 - 0.009 16.6 0.0 0.013 16.1 0.0 1.2 1 0 0 1 1 1 1 60S ribosome biogenesis protein Rrp14 Dehydrin PF00257.19 NODE_64309_length_250_cov_74.586047_g56368_i0forward_frame_3 - 0.052 14.1 1.1 0.056 14.0 1.1 1.2 1 0 0 1 1 1 0 Dehydrin Kv2channel PF03521.14 NODE_64306_length_250_cov_80.925581_g56365_i0forward_frame_3 - 0.043 13.2 0.1 0.053 12.9 0.1 1.1 1 0 0 1 1 1 0 Kv2 voltage-gated K+ channel FhuF_C PF11575.8 NODE_64303_length_250_cov_88.623256_g56362_i0forward_frame_3 - 0.92 9.5 0.0 0.92 9.5 0.0 3.3 3 0 0 3 3 3 0 FhuF 2Fe-2S C-terminal domain DUF5515 PF17635.2 NODE_64301_length_250_cov_90.893023_g56360_i0forward_frame_2 - 0.1 13.3 0.0 0.2 12.4 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5515) FAST_1 PF06743.15 NODE_64299_length_250_cov_94.088372_g56358_i0forward_frame_2 - 0.013 15.5 0.0 0.017 15.1 0.0 1.1 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 1 SlyX PF04102.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 8.5e-06 26.3 4.5 2.6e-05 24.7 3.1 1.9 1 1 1 2 2 2 1 SlyX TMF_DNA_bd PF12329.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00012 22.0 3.3 0.00012 22.0 3.3 2.0 1 1 1 2 2 2 1 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00012 21.8 2.3 0.00012 21.8 2.3 2.2 1 1 1 2 2 2 1 Septum formation initiator TMF_TATA_bd PF12325.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00018 21.7 4.0 0.00033 20.8 3.8 1.7 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Phage_GP20 PF06810.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00019 21.2 5.3 0.0032 17.3 6.3 1.9 1 1 1 2 2 2 1 Phage minor structural protein GP20 PKcGMP_CC PF16808.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0003 20.6 3.8 0.14 12.1 0.5 3.7 2 1 2 4 4 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase GAS PF13851.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00041 19.8 4.1 0.00047 19.6 4.1 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding ADIP PF11559.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00043 20.4 6.6 0.00047 20.3 6.6 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Tropomyosin_1 PF12718.7 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00068 19.8 5.6 0.0009 19.4 5.6 1.3 1 0 0 1 1 1 1 Tropomyosin like CEP63 PF17045.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00077 19.4 5.4 0.00085 19.3 5.4 1.0 1 0 0 1 1 1 1 Centrosomal protein of 63 kDa Filament PF00038.21 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00078 19.1 5.5 0.00079 19.1 5.5 1.0 1 0 0 1 1 1 1 Intermediate filament protein HMMR_N PF15905.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0009 18.8 6.4 0.0011 18.5 6.4 1.2 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Fez1 PF06818.15 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.00097 19.6 4.1 0.0012 19.3 4.1 1.2 1 0 0 1 1 1 1 Fez1 BST2 PF16716.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0012 19.4 2.2 0.0012 19.4 2.2 1.9 1 1 1 2 2 2 1 Bone marrow stromal antigen 2 DUF948 PF06103.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0012 19.1 0.6 0.0018 18.5 0.6 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) BRE1 PF08647.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0012 18.8 2.6 0.0012 18.8 2.6 1.4 1 1 0 1 1 1 1 BRE1 E3 ubiquitin ligase TPR_MLP1_2 PF07926.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0013 18.8 4.6 0.0014 18.7 4.6 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein Csm1_N PF18504.1 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0017 18.6 9.5 0.003 17.9 1.8 2.9 1 1 2 3 3 3 1 Csm1 N-terminal domain Atg14 PF10186.9 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0018 17.5 5.1 0.0021 17.2 5.1 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 FliD_C PF07195.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0018 17.7 2.9 0.0021 17.5 2.9 1.1 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 C-terminus HrpB7 PF09486.10 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0027 18.1 0.2 0.003 18.0 0.2 1.2 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) Spc7 PF08317.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0033 16.4 6.3 0.0044 16.0 6.3 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein Lebercilin PF15619.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0035 17.0 6.1 0.013 15.2 6.1 1.8 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF812 PF05667.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0036 16.3 5.7 0.004 16.1 5.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) ATG16 PF08614.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0037 17.5 4.9 0.0052 17.0 4.9 1.3 1 1 0 1 1 1 1 Autophagy protein 16 (ATG16) AAA_13 PF13166.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0039 15.9 4.3 0.0043 15.8 4.3 1.0 1 0 0 1 1 1 1 AAA domain UPF0242 PF06785.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0047 17.1 2.5 0.0047 17.1 2.5 1.6 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0242) N-terminus PspA_IM30 PF04012.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.005 16.5 5.2 0.038 13.6 4.9 1.9 1 1 1 2 2 2 2 PspA/IM30 family Rab_bind PF16704.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.005 16.8 1.0 0.0064 16.5 0.4 1.5 1 1 1 2 2 1 1 Rab binding domain TolA_bind_tri PF16331.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0051 16.9 7.8 0.029 14.4 7.7 1.9 1 1 2 3 3 3 1 TolA binding protein trimerisation DUF3552 PF12072.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0054 16.2 4.5 0.0066 15.9 4.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3552) DUF4200 PF13863.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0056 17.1 2.4 0.0056 17.1 2.4 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF4200) Gp58 PF07902.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0056 15.0 3.3 0.0058 15.0 3.3 1.0 1 0 0 1 1 1 1 gp58-like protein Med9 PF07544.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.007 16.4 8.2 0.026 14.6 2.8 2.3 1 1 1 2 2 2 1 RNA polymerase II transcription mediator complex subunit 9 DUF4795 PF16043.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0075 15.9 0.8 0.0075 15.9 0.8 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4795) FlxA PF14282.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.0089 16.0 14.5 0.009 16.0 7.0 2.0 1 1 1 2 2 2 2 FlxA-like protein DUF641 PF04859.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.01 16.2 2.4 0.037 14.4 2.4 2.0 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF1465 PF07323.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.011 15.6 0.8 0.012 15.5 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) LPP PF04728.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.011 16.1 5.0 0.1 13.0 2.2 2.7 1 1 2 3 3 3 0 Lipoprotein leucine-zipper GrpE PF01025.19 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.012 15.3 3.6 0.015 15.0 3.6 1.3 1 0 0 1 1 1 0 GrpE Prefoldin_2 PF01920.20 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.012 15.6 1.4 0.012 15.6 1.4 2.2 1 1 1 2 2 2 0 Prefoldin subunit Cep57_MT_bd PF06657.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.012 16.0 2.4 0.021 15.3 2.5 1.5 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 APG6_N PF17675.1 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.013 16.0 3.4 0.014 15.9 3.4 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region BLOC1_2 PF10046.9 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.014 15.7 3.3 0.026 14.8 2.8 1.9 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CLZ PF16526.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.015 15.7 2.1 0.023 15.0 2.0 1.5 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4618 PF15397.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.015 14.7 4.7 0.029 13.8 2.7 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) CASP_C PF08172.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.016 14.5 4.3 0.099 12.0 1.5 2.0 1 1 1 2 2 2 0 CASP C terminal Spectrin PF00435.21 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.019 15.4 2.2 0.078 13.5 2.1 1.4 1 1 0 1 1 1 0 Spectrin repeat Paralemmin PF03285.15 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.02 14.5 5.2 0.022 14.4 4.9 1.3 1 1 0 1 1 1 0 Paralemmin Tho2 PF11262.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.02 14.1 6.1 0.021 14.0 6.1 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DUF4407 PF14362.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.021 14.2 2.7 0.029 13.7 2.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Fib_alpha PF08702.10 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.023 14.9 2.7 0.023 14.9 2.7 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.023 14.7 3.1 0.05 13.6 3.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) ABC_tran_CTD PF16326.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.024 14.9 3.0 0.17 12.1 2.9 2.3 1 1 0 1 1 1 0 ABC transporter C-terminal domain DUF4164 PF13747.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.027 14.8 2.0 0.066 13.5 2.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4164) Prefoldin PF02996.17 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.027 14.4 5.1 0.039 13.9 1.1 2.2 1 1 1 2 2 2 0 Prefoldin subunit Laminin_II PF06009.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.034 14.2 4.3 0.049 13.6 4.3 1.4 1 1 0 1 1 1 0 Laminin Domain II ZapB PF06005.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.039 14.4 5.4 0.048 14.1 5.0 1.4 1 1 0 1 1 1 0 Cell division protein ZapB Fzo_mitofusin PF04799.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.039 13.5 3.5 0.07 12.7 3.5 1.5 1 1 0 1 1 1 0 fzo-like conserved region DUF3450 PF11932.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.043 13.1 4.2 0.047 13.0 4.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) V_ATPase_I PF01496.19 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.045 11.7 3.4 0.049 11.6 3.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF16 PF01519.16 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.047 14.2 6.6 0.068 13.7 6.6 1.4 1 1 0 1 1 1 0 Protein of unknown function DUF16 Swi5 PF07061.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.049 13.7 4.3 0.4 10.8 4.2 2.2 1 1 1 2 2 2 0 Swi5 FAM76 PF16046.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.054 12.9 6.8 0.062 12.7 6.8 1.0 1 0 0 1 1 1 0 FAM76 protein CENP-H PF05837.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.057 13.8 5.8 0.06 13.8 5.8 1.0 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF5082 PF16888.5 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.062 13.6 8.9 0.33 11.2 8.4 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) NPV_P10 PF05531.12 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.068 13.6 1.3 0.22 12.0 0.6 1.8 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein FlaC_arch PF05377.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.07 13.5 4.9 0.12 12.8 1.3 2.2 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF4140 PF13600.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.076 13.5 3.0 0.11 12.9 2.0 1.8 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Allexi_40kDa PF05549.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.08 12.4 1.3 0.087 12.3 1.3 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein Med4 PF10018.9 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.095 12.4 3.8 0.11 12.2 3.8 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Spc24 PF08286.11 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.1 12.9 4.0 0.14 12.4 4.0 1.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 YlqD PF11068.8 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.11 12.9 7.6 0.22 11.9 7.3 1.6 1 1 1 2 2 2 0 YlqD protein Fmp27_WPPW PF10359.9 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.11 11.3 8.1 0.17 10.7 7.5 1.5 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain YabA PF06156.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.14 12.8 2.4 0.17 12.5 2.4 1.3 1 0 0 1 1 1 0 Initiation control protein YabA DUF4349 PF14257.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.16 11.4 3.3 0.25 10.7 2.4 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4349) DUF5320 PF17253.2 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.17 13.0 3.9 0.24 12.5 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5320) ACCA PF03255.14 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.17 11.7 4.0 0.32 10.9 4.0 1.6 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF4094 PF13334.6 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.23 11.9 4.1 0.85 10.1 0.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) TMPIT PF07851.13 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.24 10.6 4.9 0.26 10.5 4.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein bZIP_2 PF07716.15 NODE_64298_length_250_cov_97.953488_g56357_i0reverse_frame_2 - 0.4 10.8 7.3 0.12 12.4 1.3 2.5 1 1 1 2 2 2 0 Basic region leucine zipper DUF3527 PF12043.8 NODE_64297_length_250_cov_101.758140_g56356_i0reverse_frame_3 - 0.18 11.3 2.5 0.19 11.3 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3527) DUF5097 PF17020.5 NODE_64294_length_250_cov_113.925581_g56353_i0reverse_frame_3 - 0.0023 18.3 0.2 0.0024 18.2 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5097) DUF3767 PF12597.8 NODE_64291_length_250_cov_127.916279_g56350_i0forward_frame_2 - 0.066 13.0 1.3 0.075 12.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) Tom22 PF04281.13 NODE_64290_length_250_cov_137.441860_g56349_i0reverse_frame_2 - 0.014 15.2 0.1 0.016 15.0 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 AAA_7 PF12775.7 NODE_64288_length_250_cov_169.855814_g56347_i0forward_frame_3 - 2.5e-12 46.7 0.0 2.7e-12 46.6 0.0 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region T2SSE PF00437.20 NODE_64288_length_250_cov_169.855814_g56347_i0forward_frame_3 - 0.00036 19.7 0.0 0.00039 19.6 0.0 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein RsgA_GTPase PF03193.16 NODE_64288_length_250_cov_169.855814_g56347_i0forward_frame_3 - 0.06 13.3 0.0 0.064 13.1 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase NB-ARC PF00931.22 NODE_64288_length_250_cov_169.855814_g56347_i0forward_frame_3 - 0.11 11.7 0.0 0.21 10.7 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain PHF5 PF03660.14 NODE_64282_length_250_cov_317.920930_g56341_i0reverse_frame_2 - 0.017 15.3 0.0 0.021 15.0 0.0 1.1 1 0 0 1 1 1 0 PHF5-like protein DUF2388 PF09498.10 NODE_64281_length_250_cov_370.279070_g56340_i0reverse_frame_3 - 0.059 13.4 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2388) RCR PF12273.8 NODE_64279_length_250_cov_703.539535_g56338_i0reverse_frame_2 - 0.075 13.7 0.0 0.077 13.6 0.0 1.1 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red YajC PF02699.15 NODE_64279_length_250_cov_703.539535_g56338_i0reverse_frame_2 - 0.38 10.6 1.0 0.49 10.3 1.0 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit Toxin_32 PF08120.11 NODE_64278_length_250_cov_9558.976744_g56337_i0forward_frame_3 - 0.14 12.0 0.2 0.26 11.2 0.2 1.4 1 0 0 1 1 1 0 Tamulustoxin family Endosulfine PF04667.17 NODE_64278_length_250_cov_9558.976744_g56337_i0forward_frame_2 - 0.16 12.2 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 cAMP-regulated phosphoprotein/endosulfine conserved region COX5B PF01215.19 NODE_64276_length_251_cov_0.740741_g56335_i0forward_frame_3 - 0.23 11.1 0.2 0.29 10.8 0.2 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb GpcrRhopsn4 PF10192.9 NODE_64275_length_251_cov_0.800926_g56334_i0reverse_frame_3 - 5.6e-07 29.2 0.4 6e-07 29.1 0.4 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain Claudin_2 PF13903.6 NODE_64273_length_251_cov_0.921296_g56332_i0reverse_frame_2 - 0.026 14.3 0.2 0.029 14.1 0.2 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction MASE2 PF05230.11 NODE_64271_length_251_cov_0.981481_g56330_i0reverse_frame_2 - 0.068 13.3 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 MASE2 domain Ribosomal_L29e PF01779.17 NODE_64269_length_251_cov_1.018519_g56328_i0reverse_frame_2 - 0.13 12.6 4.0 0.28 11.5 0.0 2.4 2 1 0 2 2 2 0 Ribosomal L29e protein family COX7C PF02935.16 NODE_64267_length_251_cov_1.046296_g56326_i0reverse_frame_3 - 0.032 14.5 0.3 0.061 13.6 0.3 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc Amidoligase_2 PF12224.8 NODE_64267_length_251_cov_1.046296_g56326_i0reverse_frame_3 - 0.046 13.4 0.0 0.049 13.3 0.0 1.0 1 0 0 1 1 1 0 Putative amidoligase enzyme zf-C2H2_7 PF15269.6 NODE_64263_length_251_cov_1.106481_g56322_i0reverse_frame_2 - 0.94 9.6 4.0 2.4 8.3 1.4 2.3 2 1 0 2 2 2 0 Zinc-finger Pim PF16765.5 NODE_64256_length_251_cov_1.236111_g56315_i0reverse_frame_2 - 0.0029 17.7 0.2 0.0034 17.5 0.2 1.3 1 1 0 1 1 1 1 Pesticin immunity protein Nepo_coat PF03391.15 NODE_64255_length_251_cov_1.250000_g56314_i0reverse_frame_3 - 0.0017 17.8 0.0 0.0022 17.5 0.0 1.1 1 0 0 1 1 1 1 Nepovirus coat protein, central domain tRNA_lig_CPD PF08302.11 NODE_64253_length_251_cov_1.259259_g56312_i0reverse_frame_2 - 0.0055 16.2 0.1 0.0055 16.2 0.1 1.1 1 0 0 1 1 1 1 Fungal tRNA ligase phosphodiesterase domain TMEM132D_C PF15706.5 NODE_64251_length_251_cov_1.268519_g56310_i0reverse_frame_2 - 0.0007 19.3 0.6 0.00076 19.2 0.6 1.1 1 0 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term WTF PF03303.13 NODE_64249_length_251_cov_1.296296_g56308_i0forward_frame_2 - 0.14 11.9 5.2 0.13 12.0 5.2 1.1 1 0 0 1 1 1 0 WTF protein MNSV_P7B PF06692.11 NODE_64249_length_251_cov_1.296296_g56308_i0forward_frame_2 - 1.6 8.7 5.1 0.21 11.6 1.3 1.5 2 0 0 2 2 2 0 Melon necrotic spot virus P7B protein SNAD4 PF18750.1 NODE_64247_length_251_cov_1.328704_g56306_i0reverse_frame_3 - 0.022 14.9 0.4 0.022 14.9 0.4 1.5 1 1 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 dCMP_cyt_deam_1 PF00383.23 NODE_64247_length_251_cov_1.328704_g56306_i0reverse_frame_3 - 0.03 14.2 0.5 0.03 14.2 0.5 1.5 1 1 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region NAD1 PF18778.1 NODE_64247_length_251_cov_1.328704_g56306_i0reverse_frame_3 - 0.044 13.9 1.0 0.067 13.3 1.0 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 APOBEC4_like PF18774.1 NODE_64247_length_251_cov_1.328704_g56306_i0reverse_frame_3 - 0.41 10.6 1.9 0.51 10.3 1.9 1.2 1 0 0 1 1 1 0 APOBEC4-like -AID/APOBEC-deaminase Usp PF00582.26 NODE_64247_length_251_cov_1.328704_g56306_i0forward_frame_2 - 7.5e-06 26.5 0.0 8.7e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Universal stress protein family zf-TFIIIC PF12660.7 NODE_64246_length_251_cov_1.328704_g56305_i0reverse_frame_3 - 0.078 12.9 0.5 0.14 12.1 0.2 1.7 1 1 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex PAN_4 PF14295.6 NODE_64246_length_251_cov_1.328704_g56305_i0reverse_frame_2 - 0.07 13.1 0.1 0.07 13.1 0.1 2.0 2 0 0 2 2 2 0 PAN domain DUF2534 PF10749.9 NODE_64245_length_251_cov_1.347222_g56304_i0forward_frame_2 - 0.14 12.3 2.9 0.21 11.8 2.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2534) Fer4_3 PF12798.7 NODE_64241_length_251_cov_1.393519_g56300_i0forward_frame_2 - 0.029 15.3 1.4 0.097 13.6 0.0 2.4 2 2 0 2 2 2 0 4Fe-4S binding domain DUF3079 PF11278.8 NODE_64239_length_251_cov_1.435185_g56298_i0reverse_frame_2 - 0.032 14.0 0.0 0.047 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3079) DUF3746 PF12562.8 NODE_64237_length_251_cov_1.462963_g56296_i0forward_frame_3 - 0.9 9.5 5.7 2.5 8.1 5.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3746) SWIM PF04434.17 NODE_64235_length_251_cov_1.467593_g56294_i0reverse_frame_3 - 0.045 13.4 6.0 0.073 12.8 5.9 1.6 1 1 0 1 1 1 0 SWIM zinc finger His_Me_b4a2 PF18275.1 NODE_64234_length_251_cov_1.476852_g56293_i0reverse_frame_2 - 0.24 11.5 2.2 3 8.0 0.0 2.2 2 0 0 2 2 2 0 His-Me finger endonuclease beta4-alpha2 domain Med21 PF11221.8 NODE_64234_length_251_cov_1.476852_g56293_i0forward_frame_3 - 0.0077 16.5 0.1 0.0081 16.4 0.1 1.2 1 0 0 1 1 1 1 Subunit 21 of Mediator complex Pox_P35 PF03213.14 NODE_64233_length_251_cov_1.476852_g56292_i0reverse_frame_2 - 0.13 11.5 1.0 0.13 11.4 1.0 1.1 1 0 0 1 1 1 0 Poxvirus P35 protein ATP_bind_2 PF03668.15 NODE_64233_length_251_cov_1.476852_g56292_i0forward_frame_2 - 0.029 13.7 0.1 0.034 13.5 0.1 1.1 1 0 0 1 1 1 0 P-loop ATPase protein family LMBR1 PF04791.16 NODE_64233_length_251_cov_1.476852_g56292_i0forward_frame_2 - 0.24 10.2 1.3 0.25 10.2 1.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein API5 PF05918.11 NODE_64232_length_251_cov_1.481481_g56291_i0reverse_frame_2 - 0.053 12.3 0.1 0.053 12.3 0.1 1.1 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) DUF4024 PF13216.6 NODE_64230_length_251_cov_1.500000_g56289_i0reverse_frame_3 - 0.13 12.2 0.3 0.13 12.2 0.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4024) MCR PF18509.1 NODE_64227_length_251_cov_1.546296_g56286_i0forward_frame_3 - 3.7 7.2 10.8 1.4 8.5 0.5 3.1 3 0 0 3 3 3 0 Magnetochrome domain RepB-RCR_reg PF10723.9 NODE_64225_length_251_cov_1.597222_g56284_i0reverse_frame_3 - 0.078 12.9 1.0 0.098 12.6 1.0 1.1 1 0 0 1 1 1 0 Replication regulatory protein RepB CRISPR_Cas9_WED PF18061.1 NODE_64225_length_251_cov_1.597222_g56284_i0reverse_frame_2 - 0.0035 17.4 1.8 0.0039 17.3 1.8 1.0 1 0 0 1 1 1 1 CRISPR-Cas9 WED domain DUF2570 PF10828.8 NODE_64225_length_251_cov_1.597222_g56284_i0reverse_frame_2 - 0.011 15.6 0.9 0.012 15.4 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) LAGLIDADG_WhiA PF14527.6 NODE_64225_length_251_cov_1.597222_g56284_i0reverse_frame_2 - 0.017 15.2 1.8 0.019 15.0 1.8 1.1 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain EIF4E-T PF10477.9 NODE_64225_length_251_cov_1.597222_g56284_i0reverse_frame_2 - 0.14 11.0 2.1 0.14 11.0 2.1 1.0 1 0 0 1 1 1 0 Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E SK_channel PF03530.14 NODE_64225_length_251_cov_1.597222_g56284_i0forward_frame_2 - 0.0059 16.6 3.1 0.0071 16.3 3.1 1.0 1 0 0 1 1 1 1 Calcium-activated SK potassium channel SARS_X4 PF08779.10 NODE_64221_length_251_cov_1.606481_g56280_i0reverse_frame_2 - 0.014 15.6 0.0 0.017 15.3 0.0 1.1 1 0 0 1 1 1 0 SARS coronavirus X4 like GSH_synth_ATP PF03917.17 NODE_64219_length_251_cov_1.629630_g56278_i0reverse_frame_3 - 6.5e-15 54.8 0.0 6.8e-15 54.7 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain MRP PF09387.10 NODE_64216_length_251_cov_1.638889_g56275_i0reverse_frame_3 - 0.058 13.4 0.2 0.074 13.0 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial RNA binding protein MRP K1 PF02960.14 NODE_64216_length_251_cov_1.638889_g56275_i0reverse_frame_3 - 0.058 13.5 0.9 0.06 13.5 0.9 1.1 1 0 0 1 1 1 0 K1 glycoprotein LdpA_C PF12617.8 NODE_64214_length_251_cov_1.657407_g56273_i0forward_frame_3 - 0.16 11.6 0.1 0.25 10.9 0.0 1.3 1 1 1 2 2 2 0 Iron-Sulfur binding protein C terminal Phage_holin_2_3 PF16080.5 NODE_64213_length_251_cov_1.662037_g56272_i0reverse_frame_2 - 2.4 8.0 4.9 7.7 6.4 4.9 2.0 1 1 0 1 1 1 0 Bacteriophage holin family HP1 SLAC1 PF03595.17 NODE_64212_length_251_cov_1.666667_g56271_i0reverse_frame_3 - 0.18 11.1 0.1 0.21 10.8 0.1 1.1 1 0 0 1 1 1 0 Voltage-dependent anion channel Imm30 PF15565.6 NODE_64209_length_251_cov_1.699074_g56268_i0reverse_frame_2 - 0.0036 17.3 0.9 0.0043 17.1 0.9 1.1 1 0 0 1 1 1 1 Immunity protein 30 PurA PF04845.13 NODE_64209_length_251_cov_1.699074_g56268_i0reverse_frame_2 - 0.015 14.7 0.2 0.016 14.5 0.2 1.0 1 0 0 1 1 1 0 PurA ssDNA and RNA-binding protein CBM77 PF18283.1 NODE_64209_length_251_cov_1.699074_g56268_i0forward_frame_3 - 0.013 15.9 0.1 0.018 15.4 0.1 1.3 1 0 0 1 1 1 0 Carbohydrate binding module 77 DUF1871 PF08958.10 NODE_64208_length_251_cov_1.717593_g56267_i0forward_frame_3 - 0.16 12.3 0.1 0.21 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1871) HEAT_UF PF18817.1 NODE_64205_length_251_cov_1.773148_g56264_i0reverse_frame_2 - 0.01 16.1 2.0 0.014 15.6 2.0 1.2 1 0 0 1 1 1 0 Repeat of uncharacterized protein PH0542 Mrpl_C PF18502.1 NODE_64205_length_251_cov_1.773148_g56264_i0reverse_frame_2 - 0.045 14.0 0.1 0.052 13.8 0.1 1.2 1 0 0 1 1 1 0 54S ribosomal protein L8 C-terminal domain Antiterm PF03589.13 NODE_64205_length_251_cov_1.773148_g56264_i0reverse_frame_2 - 0.11 12.9 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Antitermination protein Filament PF00038.21 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.00082 19.1 3.3 0.00095 18.8 3.3 1.0 1 0 0 1 1 1 1 Intermediate filament protein CEP209_CC5 PF16574.5 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.0042 17.3 6.2 0.46 10.7 0.9 2.0 1 1 1 2 2 2 2 Coiled-coil region of centrosome protein CE290 Tropomyosin_1 PF12718.7 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.015 15.5 9.4 0.026 14.7 9.4 1.4 1 1 0 1 1 1 0 Tropomyosin like SlyX PF04102.12 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.015 15.9 4.5 0.024 15.2 1.9 2.0 1 1 0 2 2 2 0 SlyX Exonuc_VII_L PF02601.15 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.025 14.2 3.1 0.03 13.9 3.1 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit YqaH PF17448.2 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.044 14.1 2.7 0.048 14.0 1.1 1.8 1 1 1 2 2 2 0 Uncharacterized YqaH-like DUF1053 PF06327.14 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.044 14.3 7.3 0.055 14.0 7.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1053) LUC7 PF03194.15 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.05 13.3 4.6 0.047 13.3 3.1 1.6 1 1 0 1 1 1 0 LUC7 N_terminus BshC PF10079.9 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.057 12.2 5.6 0.064 12.0 5.6 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC XhlA PF10779.9 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.078 13.2 10.3 0.2 11.9 1.9 2.1 1 1 1 2 2 2 0 Haemolysin XhlA Fib_alpha PF08702.10 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.078 13.2 7.7 0.51 10.5 0.5 2.1 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Baculo_PEP_C PF04513.12 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.081 13.0 1.2 0.096 12.7 1.2 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus HR1 PF02185.16 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.094 12.8 6.6 0.54 10.4 6.6 1.9 1 1 0 1 1 1 0 Hr1 repeat ARD PF03079.14 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.11 12.6 5.3 0.12 12.6 5.3 1.0 1 0 0 1 1 1 0 ARD/ARD' family ING PF12998.7 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.11 13.0 8.3 0.19 12.4 8.3 1.4 1 1 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding Csm1_N PF18504.1 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.16 12.3 8.4 1.6 9.2 1.1 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain ISG65-75 PF11727.8 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.2 10.9 5.8 0.24 10.6 5.8 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein FliD_N PF02465.18 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.23 12.2 6.4 0.6 10.8 6.4 1.6 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus DUF4407 PF14362.6 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.23 10.7 3.1 0.3 10.4 3.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) BLOC1_2 PF10046.9 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.24 11.7 8.5 1.7 9.0 7.8 2.0 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 NPV_P10 PF05531.12 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.24 11.9 4.9 4.9 7.7 1.8 2.1 1 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Prefoldin PF02996.17 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.26 11.2 10.8 2.2 8.2 1.0 2.1 2 0 0 2 2 2 0 Prefoldin subunit Nup88 PF10168.9 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.53 8.0 6.4 0.63 7.8 6.4 1.0 1 0 0 1 1 1 0 Nuclear pore component AI-2E_transport PF01594.16 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.55 9.3 1.3 0.64 9.1 1.3 1.0 1 0 0 1 1 1 0 AI-2E family transporter TMPIT PF07851.13 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.62 9.3 3.5 0.74 9.0 3.5 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4250 PF14056.6 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 0.65 10.0 5.5 0.49 10.4 2.2 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4250) YtxH PF12732.7 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 1.8 9.2 5.9 6.9 7.3 5.9 1.9 1 1 0 1 1 1 0 YtxH-like protein KID PF02524.14 NODE_64204_length_251_cov_1.782407_g56263_i0reverse_frame_2 - 6.7 7.3 6.9 21 5.8 0.1 3.5 3 0 0 3 3 3 0 KID repeat RALF PF05498.11 NODE_64201_length_251_cov_1.833333_g56260_i0reverse_frame_2 - 0.096 13.7 2.7 1.7 9.7 0.0 2.6 2 1 1 3 3 3 0 Rapid ALkalinization Factor (RALF) HNF-1B_C PF04812.13 NODE_64196_length_251_cov_1.967593_g56255_i0forward_frame_3 - 0.12 12.2 0.0 0.13 12.1 0.0 1.0 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus DUF4528 PF15031.6 NODE_64194_length_251_cov_1.990741_g56253_i0forward_frame_3 - 0.11 12.6 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) CAT_RBD PF03123.15 NODE_64192_length_251_cov_2.032407_g56251_i0forward_frame_2 - 1.1 9.2 5.0 0.22 11.5 1.6 1.6 2 0 0 2 2 2 0 CAT RNA binding domain FlxA PF14282.6 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.012 15.5 1.8 0.018 15.0 1.8 1.4 1 1 0 1 1 1 0 FlxA-like protein Prefoldin_2 PF01920.20 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.021 14.8 2.0 0.021 14.8 2.0 1.6 2 0 0 2 2 2 0 Prefoldin subunit Fib_alpha PF08702.10 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.03 14.5 2.4 0.053 13.7 2.4 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family FlaC_arch PF05377.11 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.031 14.6 2.5 0.14 12.6 0.5 2.3 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Spc24 PF08286.11 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.032 14.5 1.7 0.043 14.0 1.7 1.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 Sec34 PF04136.15 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.033 14.1 1.4 19 5.1 0.0 2.0 1 1 0 1 1 1 0 Sec34-like family Baculo_PEP_C PF04513.12 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.042 13.9 1.2 0.057 13.5 1.2 1.3 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus RasGAP_C PF03836.15 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.054 13.6 3.2 0.07 13.3 3.2 1.2 1 0 0 1 1 1 0 RasGAP C-terminus GIT_CC PF16559.5 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.088 12.7 1.5 0.22 11.4 1.5 1.7 1 1 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor H-kinase_dim PF02895.14 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.1 13.0 0.8 0.16 12.4 0.3 1.5 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain DUF2205 PF10224.9 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.2 11.7 3.3 0.23 11.5 2.6 1.5 1 1 0 1 1 1 0 Short coiled-coil protein DUF3573 PF12097.8 NODE_64191_length_251_cov_2.037037_g56250_i0reverse_frame_2 - 0.21 10.4 0.5 0.2 10.4 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DUF2688 PF10892.8 NODE_64191_length_251_cov_2.037037_g56250_i0forward_frame_2 - 0.13 11.7 0.7 0.19 11.2 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) Fmp27 PF10344.9 NODE_64190_length_251_cov_2.055556_g56249_i0reverse_frame_2 - 0.13 10.4 0.1 0.15 10.1 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial protein from FMP27 Malic_M PF03949.15 NODE_64189_length_251_cov_2.069444_g56248_i0forward_frame_3 - 0.19 10.9 0.0 0.23 10.7 0.0 1.0 1 0 0 1 1 1 0 Malic enzyme, NAD binding domain Kelch_5 PF13854.6 NODE_64187_length_251_cov_2.106481_g56246_i0reverse_frame_2 - 2.9e-09 36.7 0.0 4.4e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 NODE_64187_length_251_cov_2.106481_g56246_i0reverse_frame_2 - 6.1e-09 35.3 0.0 7.9e-09 35.0 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_2 PF07646.15 NODE_64187_length_251_cov_2.106481_g56246_i0reverse_frame_2 - 1.5e-08 34.3 0.2 6e-08 32.4 0.0 1.8 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 NODE_64187_length_251_cov_2.106481_g56246_i0reverse_frame_2 - 4.3e-08 33.0 0.0 5.7e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_64187_length_251_cov_2.106481_g56246_i0reverse_frame_2 - 7.1e-08 32.5 0.0 1.2e-07 31.8 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 NODE_64187_length_251_cov_2.106481_g56246_i0reverse_frame_2 - 6.1e-06 26.4 0.0 1e-05 25.6 0.0 1.4 1 0 0 1 1 1 1 Galactose oxidase, central domain zf-B_box PF00643.24 NODE_64185_length_251_cov_2.189815_g56244_i0reverse_frame_2 - 2.2 8.5 9.7 0.19 11.9 1.9 2.2 2 0 0 2 2 2 0 B-box zinc finger Peptidase_A22B PF04258.13 NODE_64184_length_251_cov_2.268519_g56243_i0forward_frame_3 - 7.5e-13 48.6 6.5 7.8e-13 48.6 6.5 1.0 1 0 0 1 1 1 1 Signal peptide peptidase Fimbrillin_C PF15495.6 NODE_64183_length_251_cov_2.273148_g56242_i0reverse_frame_3 - 0.13 12.8 0.1 0.19 12.2 0.1 1.3 1 0 0 1 1 1 0 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal zf-C2H2_4 PF13894.6 NODE_64183_length_251_cov_2.273148_g56242_i0forward_frame_2 - 1.5 9.9 0.1 1.5 9.9 0.1 3.6 4 1 0 4 4 4 0 C2H2-type zinc finger DUF2393 PF09624.10 NODE_64182_length_251_cov_2.310185_g56241_i0reverse_frame_3 - 0.079 13.0 4.7 0.078 13.0 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) Transglut_N PF00868.20 NODE_64182_length_251_cov_2.310185_g56241_i0reverse_frame_3 - 4.2 7.7 9.3 4.3 7.7 1.1 2.2 2 0 0 2 2 2 0 Transglutaminase family YABBY PF04690.13 NODE_64182_length_251_cov_2.310185_g56241_i0reverse_frame_2 - 0.42 11.2 5.7 0.47 11.0 5.7 1.0 1 0 0 1 1 1 0 YABBY protein zf-LITAF-like PF10601.9 NODE_64181_length_251_cov_2.328704_g56240_i0reverse_frame_3 - 2.7 8.3 9.8 1.4 9.2 3.5 2.1 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain zf-AN1 PF01428.16 NODE_64181_length_251_cov_2.328704_g56240_i0forward_frame_3 - 0.013 15.7 1.3 0.024 14.8 1.3 1.4 1 0 0 1 1 1 0 AN1-like Zinc finger Nse5 PF08691.10 NODE_64179_length_251_cov_2.375000_g56238_i0forward_frame_2 - 0.053 12.2 1.7 0.065 11.9 1.7 1.0 1 0 0 1 1 1 0 DNA repair proteins Nse5 and Nse6 ASC PF00858.24 NODE_64174_length_251_cov_2.449074_g56233_i0reverse_frame_3 - 0.0028 16.7 0.2 0.0028 16.7 0.2 1.0 1 0 0 1 1 1 1 Amiloride-sensitive sodium channel SMP_LBD PF17047.5 NODE_64171_length_251_cov_2.587963_g56230_i0reverse_frame_2 - 5.8e-06 25.9 0.0 5.9e-06 25.9 0.0 1.0 1 0 0 1 1 1 1 Synaptotagmin-like mitochondrial-lipid-binding domain HnRNPA1 PF11627.8 NODE_64171_length_251_cov_2.587963_g56230_i0reverse_frame_2 - 0.038 14.2 0.3 0.053 13.7 0.3 1.2 1 0 0 1 1 1 0 Nuclear factor hnRNPA1 Peptidase_U32 PF01136.19 NODE_64171_length_251_cov_2.587963_g56230_i0forward_frame_2 - 0.17 11.0 0.1 0.19 10.8 0.1 1.0 1 0 0 1 1 1 0 Peptidase family U32 DUF4649 PF15507.6 NODE_64169_length_251_cov_2.625000_g56228_i0reverse_frame_3 - 0.088 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4649) DUF483 PF04467.12 NODE_64166_length_251_cov_2.694444_g56225_i0reverse_frame_3 - 0.038 14.0 0.2 0.049 13.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF483) 5-FTHF_cyc-lig PF01812.20 NODE_64165_length_251_cov_2.722222_g56224_i0forward_frame_3 - 0.011 15.6 0.0 0.013 15.3 0.0 1.1 1 0 0 1 1 1 0 5-formyltetrahydrofolate cyclo-ligase family Carb_bind PF10645.9 NODE_64164_length_251_cov_2.805556_g56223_i0reverse_frame_2 - 0.095 12.9 0.2 0.13 12.5 0.2 1.3 1 0 0 1 1 1 0 Carbohydrate binding Ydr279_N PF17745.1 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_3 - 0.16 12.2 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Ydr279p protein triple barrel domain Cep57_CLD_2 PF14197.6 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.008 16.2 0.3 4.4 7.5 0.0 2.2 2 0 0 2 2 2 2 Centrosome localisation domain of PPC89 SIKE PF05769.11 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.015 15.2 0.1 0.022 14.7 0.1 1.3 1 1 0 1 1 1 0 SIKE family Csm1_N PF18504.1 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.026 14.8 0.4 0.039 14.3 0.4 1.3 1 0 0 1 1 1 0 Csm1 N-terminal domain HALZ PF02183.18 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.034 14.4 2.1 0.2 11.9 0.2 2.3 2 0 0 2 2 2 0 Homeobox associated leucine zipper ZapB PF06005.12 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.041 14.3 1.0 0.093 13.2 1.0 1.6 1 1 0 1 1 1 0 Cell division protein ZapB bZIP_1 PF00170.21 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.13 12.4 1.4 1.8 8.7 0.7 2.1 1 1 1 2 2 2 0 bZIP transcription factor TMF_DNA_bd PF12329.8 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.22 11.5 2.5 4.8 7.3 0.2 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 NODE_64163_length_251_cov_2.875000_g56222_i0forward_frame_2 - 0.39 10.5 3.4 5.7 6.8 2.0 2.1 1 1 1 2 2 2 0 Septum formation initiator DUF2934 PF11154.8 NODE_64159_length_251_cov_2.935185_g56218_i0reverse_frame_3 - 4.7 7.0 4.8 9.5 6.0 0.2 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2934) HILPDA PF15220.6 NODE_64159_length_251_cov_2.935185_g56218_i0forward_frame_3 - 0.3 11.3 4.9 2.4 8.4 0.2 2.8 2 1 1 3 3 3 0 Hypoxia-inducible lipid droplet-associated CdiI_2 PF18593.1 NODE_64156_length_251_cov_3.046296_g56215_i0reverse_frame_2 - 0.087 13.5 0.0 0.11 13.2 0.0 1.1 1 0 0 1 1 1 0 CdiI immunity protein TniB PF05621.11 NODE_64155_length_251_cov_3.138889_g56214_i0reverse_frame_2 - 0.23 10.9 0.0 0.24 10.8 0.0 1.0 1 0 0 1 1 1 0 Bacterial TniB protein zf-C2H2_2 PF12756.7 NODE_64145_length_251_cov_3.694444_g56204_i0reverse_frame_3 - 0.069 13.5 0.4 0.074 13.4 0.4 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2H2 PF00096.26 NODE_64143_length_251_cov_4.347222_g56202_i0forward_frame_2 - 4.5e-05 23.7 3.2 4.5e-05 23.7 3.2 2.2 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_64143_length_251_cov_4.347222_g56202_i0forward_frame_2 - 0.0012 19.5 3.0 0.0012 19.5 3.0 2.4 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_64143_length_251_cov_4.347222_g56202_i0forward_frame_2 - 0.02 15.2 0.4 0.02 15.2 0.4 1.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-CSL PF05207.13 NODE_64142_length_251_cov_4.449074_g56201_i0reverse_frame_2 - 1.4 8.7 9.2 3.3 7.5 0.4 2.2 1 1 1 2 2 2 0 CSL zinc finger Comm PF15957.5 NODE_64142_length_251_cov_4.449074_g56201_i0forward_frame_2 - 0.037 14.4 0.1 0.042 14.2 0.1 1.1 1 0 0 1 1 1 0 Commissureless RunxI PF08504.11 NODE_64141_length_251_cov_5.060185_g56200_i0reverse_frame_3 - 0.046 14.4 1.8 0.061 14.0 1.8 1.2 1 0 0 1 1 1 0 Runx inhibition domain DUF2254 PF10011.9 NODE_64133_length_251_cov_33.402778_g56192_i0reverse_frame_3 - 0.47 9.2 0.6 0.52 9.1 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF4681 PF15732.5 NODE_64133_length_251_cov_33.402778_g56192_i0forward_frame_2 - 0.043 14.1 0.1 0.058 13.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4681) DUF4611 PF15387.6 NODE_64130_length_251_cov_44.291667_g56189_i0reverse_frame_3 - 1.4 9.2 11.1 1 9.6 0.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4611) CD20 PF04103.15 NODE_64130_length_251_cov_44.291667_g56189_i0forward_frame_2 - 2.6 8.1 4.8 3.5 7.7 4.2 1.5 1 1 1 2 2 2 0 CD20-like family Ac76 PF05814.11 NODE_64128_length_251_cov_47.023148_g56187_i0reverse_frame_3 - 0.083 12.9 1.8 0.1 12.6 1.8 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) SR-25 PF10500.9 NODE_64128_length_251_cov_47.023148_g56187_i0forward_frame_3 - 0.11 12.1 2.3 0.11 12.1 2.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein BBIP10 PF14777.6 NODE_64127_length_251_cov_47.828704_g56186_i0forward_frame_3 - 0.02 14.5 0.2 0.032 13.8 0.2 1.5 1 0 0 1 1 1 0 Cilia BBSome complex subunit 10 PTPlike_phytase PF14566.6 NODE_64127_length_251_cov_47.828704_g56186_i0forward_frame_3 - 0.041 14.0 1.8 0.049 13.8 1.8 1.0 1 0 0 1 1 1 0 Inositol hexakisphosphate MAT1 PF06391.13 NODE_64121_length_251_cov_53.435185_g56180_i0reverse_frame_2 - 0.48 10.2 10.7 0.52 10.1 10.7 1.0 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 Microvir_H PF04687.12 NODE_64121_length_251_cov_53.435185_g56180_i0reverse_frame_2 - 1.4 8.2 5.0 1.6 8.1 5.0 1.0 1 0 0 1 1 1 0 Microvirus H protein (pilot protein) DUF2206 PF09971.9 NODE_64121_length_251_cov_53.435185_g56180_i0forward_frame_2 - 0.44 9.2 3.7 0.53 9.0 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) BCMA-Tall_bind PF09257.10 NODE_64117_length_251_cov_58.597222_g56176_i0reverse_frame_3 - 0.008 16.3 3.4 0.013 15.6 3.4 1.4 1 0 0 1 1 1 1 BCMA, TALL-1 binding 2-oxoacid_dh PF00198.23 NODE_64115_length_251_cov_59.152778_g56174_i0reverse_frame_2 - 4.3e-12 46.0 0.0 5.2e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SAM_Ste50p PF09235.10 NODE_64113_length_251_cov_61.273148_g56172_i0reverse_frame_2 - 0.055 13.7 0.0 0.078 13.2 0.0 1.3 1 1 0 1 1 1 0 Ste50p, sterile alpha motif Phage_holin_2_1 PF04971.12 NODE_64112_length_251_cov_62.388889_g56171_i0reverse_frame_3 - 0.93 9.5 3.4 1.6 8.8 3.4 1.3 1 0 0 1 1 1 0 Bacteriophage P21 holin S DUF2076 PF09849.9 NODE_64111_length_251_cov_62.958333_g56170_i0reverse_frame_3 - 0.012 15.6 4.0 0.013 15.5 4.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) PKD_channel PF08016.12 NODE_64107_length_251_cov_69.546296_g56166_i0reverse_frame_3 - 0.0096 14.6 2.1 0.01 14.5 2.1 1.0 1 0 0 1 1 1 1 Polycystin cation channel MORN PF02493.20 NODE_64105_length_251_cov_70.587963_g56164_i0reverse_frame_3 - 7.8e-11 41.2 10.5 4.2e-05 23.2 0.1 3.1 3 0 0 3 3 3 2 MORN repeat Memo PF01875.17 NODE_64102_length_251_cov_80.810185_g56161_i0forward_frame_2 - 1.3e-05 24.5 0.0 1.3e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Memo-like protein MRAP PF15183.6 NODE_64097_length_251_cov_96.055556_g56156_i0forward_frame_3 - 0.14 12.1 0.1 0.18 11.8 0.1 1.2 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family DUF1633 PF07794.11 NODE_64097_length_251_cov_96.055556_g56156_i0forward_frame_2 - 0.15 10.2 0.8 0.17 10.0 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) LVIVD PF08309.11 NODE_64095_length_251_cov_98.000000_g56154_i0forward_frame_3 - 0.13 11.6 0.0 0.2 11.0 0.0 1.3 1 0 0 1 1 1 0 LVIVD repeat NACHT PF05729.12 NODE_64094_length_251_cov_100.685185_g56153_i0reverse_frame_3 - 0.057 13.3 0.2 0.058 13.3 0.2 1.2 1 0 0 1 1 1 0 NACHT domain VHP PF02209.19 NODE_64094_length_251_cov_100.685185_g56153_i0forward_frame_2 - 0.98 9.5 5.6 1.3 9.1 5.6 1.2 1 0 0 1 1 1 0 Villin headpiece domain DUF5109 PF17134.4 NODE_64092_length_251_cov_102.101852_g56151_i0forward_frame_2 - 0.14 12.1 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5109) Peptidase_C6 PF00851.18 NODE_64091_length_251_cov_106.125000_g56150_i0reverse_frame_2 - 0.041 12.8 0.3 0.048 12.6 0.3 1.1 1 0 0 1 1 1 0 Helper component proteinase SLC12 PF03522.15 NODE_64090_length_251_cov_111.106481_g56149_i0reverse_frame_3 - 0.067 12.2 0.3 0.08 12.0 0.3 1.0 1 0 0 1 1 1 0 Solute carrier family 12 DUF937 PF06078.11 NODE_64086_length_251_cov_131.138889_g56145_i0forward_frame_3 - 0.045 14.4 0.1 0.072 13.7 0.1 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF937) cwf21 PF08312.12 NODE_64086_length_251_cov_131.138889_g56145_i0forward_frame_3 - 0.25 11.5 5.4 0.64 10.2 0.1 2.2 2 0 0 2 2 2 0 cwf21 domain TPD52 PF04201.15 NODE_64086_length_251_cov_131.138889_g56145_i0forward_frame_3 - 0.25 10.9 9.5 0.34 10.5 8.3 1.7 1 1 1 2 2 2 0 Tumour protein D52 family LZ_Tnp_IS66 PF13007.7 NODE_64086_length_251_cov_131.138889_g56145_i0forward_frame_3 - 0.52 11.1 3.5 1 10.2 3.3 1.7 1 1 0 1 1 1 0 Transposase C of IS166 homeodomain SSFA2_C PF14723.6 NODE_64080_length_251_cov_184.328704_g56139_i0forward_frame_3 - 0.056 13.3 0.0 0.062 13.2 0.0 1.0 1 0 0 1 1 1 0 Sperm-specific antigen 2 C-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks323.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks323.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks323.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks323.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SpaA PF17802.1 NODE_64075_length_251_cov_319.879630_g56134_i0reverse_frame_3 - 0.037 14.4 0.5 0.18 12.2 0.0 1.9 1 1 1 2 2 2 0 Prealbumin-like fold domain HXXEE PF13787.6 NODE_64074_length_251_cov_334.472222_g56133_i0forward_frame_2 - 0.4 11.5 3.5 0.5 11.2 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif SAM_Exu PF18609.1 NODE_64064_length_252_cov_0.986175_g56123_i0reverse_frame_3 - 0.13 12.4 0.7 0.31 11.2 0.7 1.6 1 1 0 1 1 1 0 Exuperantia SAM-like domain DUF261 PF03196.13 NODE_64062_length_252_cov_1.009217_g56121_i0reverse_frame_3 - 0.027 14.6 0.9 0.032 14.3 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF261 NIBRIN_BRCT_II PF16508.5 NODE_64062_length_252_cov_1.009217_g56121_i0reverse_frame_2 - 0.075 13.4 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Second BRCT domain on Nijmegen syndrome breakage protein Adeno_E3_14_5 PF04834.12 NODE_64060_length_252_cov_1.041475_g56119_i0forward_frame_2 - 0.045 14.3 0.0 0.061 13.9 0.0 1.3 1 0 0 1 1 1 0 Early E3 14.5 kDa protein DUF2358 PF10184.9 NODE_64058_length_252_cov_1.096774_g56117_i0reverse_frame_3 - 0.1 12.9 0.7 0.12 12.7 0.7 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2358) Pox_F17 PF04767.12 NODE_64055_length_252_cov_1.105991_g56114_i0reverse_frame_3 - 0.67 10.5 3.5 1.6 9.2 3.1 1.7 1 1 1 2 2 2 0 DNA-binding 11 kDa phosphoprotein Pex2_Pex12 PF04757.14 NODE_64055_length_252_cov_1.105991_g56114_i0reverse_frame_2 - 0.15 11.7 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region Pex2_Pex12 PF04757.14 NODE_64054_length_252_cov_1.133641_g56113_i0reverse_frame_3 - 1.1e-06 28.5 0.1 1.1e-06 28.5 0.1 1.0 1 0 0 1 1 1 1 Pex2 / Pex12 amino terminal region CBAH PF02275.18 NODE_64054_length_252_cov_1.133641_g56113_i0reverse_frame_2 - 0.11 12.1 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Linear amide C-N hydrolases, choloylglycine hydrolase family HTH_41 PF14502.6 NODE_64053_length_252_cov_1.152074_g56112_i0forward_frame_2 - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Keratin_matx PF04579.12 NODE_64051_length_252_cov_1.193548_g56110_i0reverse_frame_2 - 0.06 13.7 1.3 0.066 13.5 1.3 1.1 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein DUF5567 PF17722.1 NODE_64051_length_252_cov_1.193548_g56110_i0forward_frame_2 - 0.066 13.1 0.3 0.066 13.1 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5567) FANCI_HD1 PF14679.6 NODE_64048_length_252_cov_1.281106_g56107_i0forward_frame_3 - 0.05 13.6 0.1 0.063 13.2 0.1 1.3 1 1 0 1 1 1 0 FANCI helical domain 1 DUF1765 PF08578.10 NODE_64046_length_252_cov_1.281106_g56105_i0reverse_frame_3 - 0.083 13.4 1.4 0.083 13.4 1.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1765) Endonuc-FokI_C PF09254.11 NODE_64046_length_252_cov_1.281106_g56105_i0forward_frame_2 - 0.1 11.9 0.0 0.1 11.8 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease FokI, C terminal TMPIT PF07851.13 NODE_64039_length_252_cov_1.377880_g56098_i0forward_frame_2 - 0.031 13.5 0.8 0.039 13.2 0.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein Lig_chan PF00060.26 NODE_64034_length_252_cov_1.428571_g56093_i0forward_frame_2 - 0.38 10.6 1.4 0.51 10.2 1.4 1.2 1 0 0 1 1 1 0 Ligand-gated ion channel DUF327 PF03885.13 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_2 - 0.024 14.6 0.1 0.029 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF327) FANCI_S2 PF14676.6 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_2 - 0.071 13.4 0.4 0.16 12.2 0.4 1.5 1 1 0 1 1 1 0 FANCI solenoid 2 RIX1 PF08167.12 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_2 - 0.08 12.7 0.0 0.092 12.5 0.0 1.1 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis Nop14 PF04147.12 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_2 - 0.12 10.6 0.1 0.13 10.4 0.1 1.0 1 0 0 1 1 1 0 Nop14-like family DUF3222 PF11519.8 NODE_64030_length_252_cov_1.520737_g56089_i0forward_frame_2 - 0.16 12.2 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3222) CbiG_C PF01890.16 NODE_64029_length_252_cov_1.525346_g56088_i0reverse_frame_3 - 0.08 13.5 0.0 0.092 13.3 0.0 1.2 1 0 0 1 1 1 0 Cobalamin synthesis G C-terminus G2F PF07474.12 NODE_64025_length_252_cov_1.543779_g56084_i0reverse_frame_3 - 0.18 11.6 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 G2F domain Trp_Tyr_perm PF03222.13 NODE_64016_length_252_cov_1.658986_g56075_i0forward_frame_3 - 0.044 12.8 2.3 0.048 12.7 2.3 1.0 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family GlnD_UR_UTase PF08335.11 NODE_64015_length_252_cov_1.658986_g56074_i0forward_frame_3 - 0.032 14.3 2.1 0.035 14.2 2.1 1.1 1 0 0 1 1 1 0 GlnD PII-uridylyltransferase Fungal_TACC PF12709.7 NODE_64015_length_252_cov_1.658986_g56074_i0forward_frame_3 - 0.043 14.3 5.0 0.078 13.4 0.7 2.1 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins ASL_C PF08328.11 NODE_64015_length_252_cov_1.658986_g56074_i0forward_frame_3 - 0.062 13.4 0.9 0.075 13.1 0.9 1.2 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal BCL_N PF04714.13 NODE_64015_length_252_cov_1.658986_g56074_i0forward_frame_3 - 0.13 12.4 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 BCL7, N-terminal conserver region Yip1 PF04893.17 NODE_64011_length_252_cov_1.746544_g56070_i0reverse_frame_2 - 0.14 11.9 0.4 0.14 11.9 0.4 1.1 1 0 0 1 1 1 0 Yip1 domain Peripla_BP_7 PF18610.1 NODE_64010_length_252_cov_1.769585_g56069_i0reverse_frame_2 - 0.11 12.6 1.4 0.4 10.8 0.0 2.0 1 1 1 2 2 2 0 Periplasmic binding protein domain Glycoprotein_G PF00802.19 NODE_64008_length_252_cov_1.778802_g56067_i0forward_frame_2 - 4.6 6.5 5.5 5.6 6.3 5.5 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Lamprin PF06403.11 NODE_64007_length_252_cov_1.783410_g56066_i0reverse_frame_3 - 2.2 8.2 12.5 3.5 7.6 8.2 2.0 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_64007_length_252_cov_1.783410_g56066_i0reverse_frame_2 - 8.4 6.4 8.3 77 3.2 8.3 2.1 1 1 0 1 1 1 0 Lamprin RRF_GI PF12614.8 NODE_64006_length_252_cov_1.788018_g56065_i0forward_frame_3 - 0.028 14.6 2.1 0.037 14.2 2.1 1.2 1 0 0 1 1 1 0 Ribosome recycling factor Ribosomal_L37e PF01907.19 NODE_64005_length_252_cov_1.806452_g56064_i0reverse_frame_3 - 0.17 12.0 0.1 0.17 12.0 0.1 2.2 2 0 0 2 2 2 0 Ribosomal protein L37e PIG-P PF08510.12 NODE_64005_length_252_cov_1.806452_g56064_i0forward_frame_2 - 0.016 15.1 2.6 0.019 14.9 2.6 1.1 1 0 0 1 1 1 0 PIG-P RIH_assoc PF08454.11 NODE_64004_length_252_cov_1.820276_g56063_i0forward_frame_2 - 0.063 13.1 0.1 1.3 8.9 0.0 2.0 1 1 1 2 2 2 0 RyR and IP3R Homology associated Imm26 PF15428.6 NODE_64003_length_252_cov_1.829493_g56062_i0reverse_frame_2 - 0.083 13.1 0.4 0.1 12.8 0.4 1.3 1 1 0 1 1 1 0 Immunity protein 26 PGC7_Stella PF15549.6 NODE_64002_length_252_cov_1.838710_g56061_i0forward_frame_3 - 0.14 12.2 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain MscS_TM PF12794.7 NODE_63999_length_252_cov_1.843318_g56058_i0forward_frame_3 - 0.27 10.1 0.0 0.29 10.0 0.0 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Headcase PF16002.5 NODE_63999_length_252_cov_1.843318_g56058_i0forward_frame_2 - 0.12 11.8 6.4 0.12 11.8 6.0 1.3 1 1 0 1 1 1 0 Headcase protein DUF4529 PF15032.6 NODE_63998_length_252_cov_1.866359_g56057_i0reverse_frame_3 - 0.096 11.8 0.1 0.11 11.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) SWIM PF04434.17 NODE_63998_length_252_cov_1.866359_g56057_i0forward_frame_2 - 0.29 10.9 3.2 0.6 9.8 3.2 1.6 1 1 0 1 1 1 0 SWIM zinc finger FliS_cochap PF16522.5 NODE_63995_length_252_cov_1.884793_g56054_i0forward_frame_2 - 0.022 14.7 0.2 0.024 14.6 0.2 1.0 1 0 0 1 1 1 0 Flagellar FLiS export co-chaperone, HP1076 p450 PF00067.22 NODE_63993_length_252_cov_1.917051_g56052_i0reverse_frame_2 - 0.036 12.8 2.3 0.038 12.8 2.3 1.0 1 0 0 1 1 1 0 Cytochrome P450 EF-hand_5 PF13202.6 NODE_63993_length_252_cov_1.917051_g56052_i0reverse_frame_2 - 0.072 12.6 0.7 0.072 12.6 0.7 1.6 2 0 0 2 2 2 0 EF hand SAP PF02037.27 NODE_63992_length_252_cov_1.921659_g56051_i0reverse_frame_3 - 0.13 12.0 0.2 0.4 10.5 0.1 1.8 2 0 0 2 2 2 0 SAP domain Acetyltransf_1 PF00583.25 NODE_63989_length_252_cov_1.958525_g56048_i0forward_frame_3 - 0.038 14.2 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family DUF3013 PF11217.8 NODE_63989_length_252_cov_1.958525_g56048_i0forward_frame_3 - 0.12 12.3 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3013) LRR_adjacent PF08191.11 NODE_63986_length_252_cov_2.082949_g56045_i0reverse_frame_2 - 0.1 12.8 0.2 0.2 11.9 0.2 1.5 1 0 0 1 1 1 0 LRR adjacent Herpes_UL32 PF06070.11 NODE_63982_length_252_cov_2.110599_g56041_i0reverse_frame_3 - 2.9 5.5 5.2 3.3 5.3 5.2 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 WGR PF05406.15 NODE_63982_length_252_cov_2.110599_g56041_i0reverse_frame_2 - 1.4e-09 37.9 0.3 1.9e-09 37.4 0.3 1.2 1 0 0 1 1 1 1 WGR domain DUF5445 PF17520.2 NODE_63979_length_252_cov_2.161290_g56038_i0reverse_frame_2 - 8.4e-31 105.6 4.4 8.4e-31 105.6 4.4 1.5 2 0 0 2 2 2 1 Family of unknown function (DUF5445) zf-C3HC4 PF00097.25 NODE_63977_length_252_cov_2.230415_g56036_i0forward_frame_3 - 0.015 15.1 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) LRR19-TM PF15176.6 NODE_63974_length_252_cov_2.313364_g56033_i0forward_frame_3 - 0.62 10.1 3.3 5.8 7.0 0.2 2.1 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain STAG PF08514.11 NODE_63972_length_252_cov_2.442396_g56031_i0forward_frame_2 - 0.025 14.5 0.5 0.029 14.3 0.5 1.1 1 0 0 1 1 1 0 STAG domain PRANC PF09372.10 NODE_63971_length_252_cov_2.456221_g56030_i0forward_frame_3 - 0.056 13.8 0.3 0.069 13.5 0.3 1.2 1 0 0 1 1 1 0 PRANC domain MFS_1 PF07690.16 NODE_63970_length_252_cov_2.470046_g56029_i0reverse_frame_2 - 1.7e-10 40.3 9.1 1.8e-10 40.3 9.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_63970_length_252_cov_2.470046_g56029_i0reverse_frame_2 - 0.00029 19.8 4.0 0.0003 19.8 4.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter RIFIN PF02009.16 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.013 15.4 5.2 0.013 15.4 5.2 1.5 1 1 1 2 2 2 0 Rifin DUF2417 PF10329.9 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.044 13.2 4.3 0.05 13.0 4.3 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) EphA2_TM PF14575.6 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.056 14.3 1.3 4.1 8.4 0.0 2.1 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF5079 PF16882.5 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.061 13.2 0.9 0.061 13.2 0.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5079) DUF4501 PF14946.6 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.088 12.9 0.1 0.091 12.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) AveC_like PF17198.4 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 0.12 11.8 2.0 0.14 11.6 2.0 1.1 1 0 0 1 1 1 0 Spirocyclase AveC-like COPI_assoc PF08507.10 NODE_63969_length_252_cov_2.516129_g56028_i0forward_frame_2 - 2.2 8.3 11.6 0.49 10.5 4.0 2.1 1 1 1 2 2 2 0 COPI associated protein Herpes_UL3 PF03369.13 NODE_63968_length_252_cov_2.543779_g56027_i0reverse_frame_3 - 0.053 14.1 0.3 0.067 13.7 0.3 1.2 1 0 0 1 1 1 0 Herpesvirus UL3 protein BMFP PF04380.13 NODE_63968_length_252_cov_2.543779_g56027_i0reverse_frame_2 - 5.9e-07 29.9 0.1 7.4e-07 29.6 0.1 1.1 1 0 0 1 1 1 1 Membrane fusogenic activity ApoC-I PF04691.12 NODE_63968_length_252_cov_2.543779_g56027_i0reverse_frame_2 - 0.022 14.7 0.1 0.036 14.0 0.1 1.4 1 0 0 1 1 1 0 Apolipoprotein C-I (ApoC-1) Bac_RepA_C PF18008.1 NODE_63967_length_252_cov_2.548387_g56026_i0forward_frame_2 - 0.044 14.1 0.2 0.056 13.8 0.2 1.1 1 0 0 1 1 1 0 Replication initiator protein A C-terminal domain HTH_49 PF18010.1 NODE_63962_length_252_cov_2.645161_g56021_i0forward_frame_3 - 0.11 12.3 1.3 0.46 10.4 0.1 2.3 3 0 0 3 3 3 0 Cry35Ab1 HTH C-terminal domain Toxin_26 PF08097.11 NODE_63961_length_252_cov_2.654378_g56020_i0reverse_frame_3 - 0.21 12.3 2.3 0.21 12.3 2.3 2.2 2 0 0 2 2 2 0 Conotoxin T-superfamily EF-hand_1 PF00036.32 NODE_63955_length_252_cov_2.792627_g56014_i0forward_frame_3 - 0.00024 20.4 0.4 0.045 13.3 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_63955_length_252_cov_2.792627_g56014_i0forward_frame_3 - 0.0012 18.7 0.1 0.086 12.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_63955_length_252_cov_2.792627_g56014_i0forward_frame_3 - 0.0033 17.2 0.4 0.58 10.2 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 NODE_63955_length_252_cov_2.792627_g56014_i0forward_frame_3 - 0.014 15.9 0.2 0.071 13.6 0.1 1.9 1 1 1 2 2 2 0 EF-hand domain pair Glyco_transf_7N PF13733.6 NODE_63952_length_252_cov_2.944700_g56011_i0forward_frame_3 - 0.084 12.5 0.1 0.11 12.2 0.1 1.3 1 1 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 Fam20C PF06702.12 NODE_63951_length_252_cov_3.004608_g56010_i0reverse_frame_2 - 0.011 15.6 2.4 0.013 15.3 2.4 1.1 1 0 0 1 1 1 0 Golgi casein kinase, C-terminal, Fam20 Aminotran_3 PF00202.21 NODE_63944_length_252_cov_3.940092_g56003_i0reverse_frame_2 - 3.2e-23 82.1 0.0 3.7e-23 81.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III EGF PF00008.27 NODE_63942_length_252_cov_5.105991_g56001_i0reverse_frame_2 - 0.074 13.4 0.7 0.13 12.6 0.7 1.3 1 0 0 1 1 1 0 EGF-like domain DUF2631 PF10939.8 NODE_63934_length_252_cov_23.239631_g55993_i0reverse_frame_3 - 0.14 12.0 0.6 8.4 6.3 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2631) Col_cuticle_N PF01484.17 NODE_63931_length_252_cov_36.686636_g55990_i0forward_frame_2 - 0.61 10.2 1.6 0.9 9.6 0.1 1.9 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain ParBc PF02195.18 NODE_63930_length_252_cov_39.801843_g55989_i0reverse_frame_2 - 0.085 13.2 0.2 6.1 7.2 0.0 2.1 2 0 0 2 2 2 0 ParB-like nuclease domain Axin_b-cat_bind PF08833.10 NODE_63930_length_252_cov_39.801843_g55989_i0reverse_frame_2 - 9.8 6.4 9.3 57 3.9 4.1 2.9 2 1 0 2 2 2 0 Axin beta-catenin binding domain Peptidase_S28 PF05577.12 NODE_63928_length_252_cov_41.115207_g55987_i0forward_frame_3 - 0.019 13.8 0.4 0.02 13.7 0.4 1.0 1 0 0 1 1 1 0 Serine carboxypeptidase S28 PDEase_I PF00233.19 NODE_63924_length_252_cov_46.783410_g55983_i0reverse_frame_3 - 0.071 12.8 0.1 0.077 12.7 0.1 1.1 1 0 0 1 1 1 0 3'5'-cyclic nucleotide phosphodiesterase Protocadherin PF08374.11 NODE_63924_length_252_cov_46.783410_g55983_i0forward_frame_2 - 0.12 12.3 0.2 0.12 12.4 0.2 1.1 1 0 0 1 1 1 0 Protocadherin DUF3678 PF12435.8 NODE_63923_length_252_cov_48.672811_g55982_i0reverse_frame_2 - 8.7 5.8 10.8 2.4 7.6 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3678) KCNQ2_u3 PF16642.5 NODE_63919_length_252_cov_51.594470_g55978_i0reverse_frame_3 - 0.28 12.2 1.9 0.35 11.9 1.9 1.2 1 0 0 1 1 1 0 Unstructured region on Potassium channel subunit alpha KvLQT2 Bap31_Bap29_C PF18035.1 NODE_63919_length_252_cov_51.594470_g55978_i0reverse_frame_3 - 0.34 10.9 10.8 1.8 8.7 10.8 2.1 1 1 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain DUF2070 PF09843.9 NODE_63919_length_252_cov_51.594470_g55978_i0forward_frame_2 - 3.4 5.9 6.9 3.5 5.8 6.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2880 PF11082.8 NODE_63918_length_252_cov_54.069124_g55977_i0reverse_frame_3 - 0.18 12.2 0.2 0.29 11.5 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2880) PBP1_TM PF14812.6 NODE_63914_length_252_cov_59.147465_g55973_i0reverse_frame_2 - 0.85 10.0 7.5 0.27 11.6 5.2 1.4 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF4245 PF14030.6 NODE_63913_length_252_cov_60.857143_g55972_i0forward_frame_2 - 0.035 14.1 0.6 0.037 14.0 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4245) TPX2_importin PF12214.8 NODE_63908_length_252_cov_67.331797_g55967_i0forward_frame_2 - 0.00039 20.7 0.0 0.00039 20.7 0.0 1.1 1 0 0 1 1 1 1 Cell cycle regulated microtubule associated protein Imm30 PF15565.6 NODE_63907_length_252_cov_68.894009_g55966_i0forward_frame_3 - 0.1 12.7 0.2 0.16 12.1 0.2 1.3 1 1 0 1 1 1 0 Immunity protein 30 YbhQ PF11076.8 NODE_63904_length_252_cov_72.728111_g55963_i0reverse_frame_3 - 0.0045 17.0 0.1 0.0055 16.7 0.1 1.1 1 0 0 1 1 1 1 Putative inner membrane protein YbhQ Phageshock_PspG PF09583.10 NODE_63904_length_252_cov_72.728111_g55963_i0reverse_frame_3 - 0.016 15.5 0.4 0.024 14.9 0.4 1.2 1 0 0 1 1 1 0 Phage shock protein G (Phageshock_PspG) ArAE_1 PF06081.11 NODE_63903_length_252_cov_74.981567_g55962_i0reverse_frame_2 - 0.021 15.0 0.0 0.025 14.7 0.0 1.0 1 0 0 1 1 1 0 Aromatic acid exporter family member 1 Sod_Fe_N PF00081.22 NODE_63901_length_252_cov_77.129032_g55960_i0reverse_frame_3 - 0.036 14.5 0.3 0.046 14.2 0.3 1.2 1 0 0 1 1 1 0 Iron/manganese superoxide dismutases, alpha-hairpin domain Vac_Fusion PF02346.16 NODE_63897_length_252_cov_88.829493_g55956_i0reverse_frame_2 - 0.06 13.0 0.3 0.12 12.0 0.0 1.7 2 0 0 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 ECSCR PF15820.5 NODE_63897_length_252_cov_88.829493_g55956_i0reverse_frame_2 - 0.077 12.8 0.1 0.099 12.5 0.1 1.3 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator TMEM52 PF14979.6 NODE_63897_length_252_cov_88.829493_g55956_i0forward_frame_3 - 0.24 11.3 1.4 0.32 10.9 1.4 1.2 1 0 0 1 1 1 0 Transmembrane 52 Ank_5 PF13857.6 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 1.9e-11 44.0 0.0 3e-06 27.4 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 4.2e-10 40.1 0.0 5.6e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 6.3e-07 29.8 0.0 9.7e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 1.3e-06 28.5 0.0 0.0065 16.9 0.0 2.9 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_63896_length_252_cov_89.119816_g55955_i0reverse_frame_2 - 0.00027 21.1 0.0 0.0012 19.2 0.0 2.0 3 0 0 3 3 3 1 Ankyrin repeat UPF0302 PF08864.10 NODE_63889_length_252_cov_131.728111_g55948_i0forward_frame_2 - 0.042 13.9 0.3 0.052 13.6 0.3 1.1 1 0 0 1 1 1 0 UPF0302 domain PPR_2 PF13041.6 NODE_63888_length_252_cov_136.410138_g55947_i0forward_frame_3 - 0.0002 21.5 0.0 0.00029 21.0 0.0 1.2 1 0 0 1 1 1 1 PPR repeat family PPR_long PF17177.4 NODE_63888_length_252_cov_136.410138_g55947_i0forward_frame_3 - 0.0011 18.4 0.0 0.0012 18.3 0.0 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP DnaB_C PF03796.15 NODE_63885_length_252_cov_248.115207_g55944_i0reverse_frame_3 - 0.056 12.8 0.1 0.064 12.6 0.1 1.1 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain SBF2 PF12335.8 NODE_63883_length_252_cov_276.179724_g55942_i0reverse_frame_2 - 0.033 13.8 0.0 0.037 13.6 0.0 1.1 1 0 0 1 1 1 0 Myotubularin protein AXE1 PF05448.12 NODE_63877_length_252_cov_4346.142857_g55936_i0reverse_frame_3 - 0.19 10.4 0.0 0.22 10.2 0.0 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Chloroa_b-bind PF00504.21 NODE_63877_length_252_cov_4346.142857_g55936_i0forward_frame_3 - 7.4e-08 33.1 0.3 7.6e-08 33.0 0.3 1.3 1 1 0 1 1 1 1 Chlorophyll A-B binding protein DUF3399 PF11879.8 NODE_63874_length_252_cov_106982.543779_g55933_i0reverse_frame_2 - 4.2 7.8 6.4 0.32 11.3 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3399) Integrin_alpha2 PF08441.12 ORF98794 - 0.089 11.7 0.1 0.092 11.6 0.1 1.0 1 0 0 1 1 1 0 Integrin alpha Extensin_1 PF02095.15 ORF97096 - 0.19 12.0 0.1 0.19 12.0 0.1 2.2 2 0 0 2 2 2 0 Extensin-like protein repeat Pox_Ag35 PF03286.14 ORF9609 - 0.022 14.5 8.0 0.025 14.4 8.0 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Trypan_PARP PF05887.11 ORF9609 - 0.14 12.1 2.9 0.15 12.0 2.9 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) MIF4G_like_2 PF09090.11 ORF9609 - 0.17 11.3 4.0 0.18 11.2 4.0 1.0 1 0 0 1 1 1 0 MIF4G like DUF4065 PF13274.6 ORF9609 - 0.39 11.6 4.0 0.5 11.3 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4065) TMEM43 PF07787.12 ORF9534 - 0.1 11.9 0.6 0.11 11.9 0.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 G6PD_bact PF10786.9 ORF94266 - 0.17 11.4 0.1 0.21 11.1 0.1 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) LOB PF03195.14 ORF93719 - 0.043 14.4 0.4 0.048 14.2 0.4 1.1 1 0 0 1 1 1 0 Lateral organ boundaries (LOB) domain Thg1 PF04446.12 ORF92193 - 6.6e-32 110.2 0.2 7.3e-32 110.0 0.2 1.0 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Chromo_2 PF18704.1 ORF91841 - 0.083 13.2 0.1 0.2 11.9 0.1 1.6 1 1 1 2 2 2 0 Chromatin organization modifier domain 2 SPATA19 PF15212.6 ORF9054 - 0.15 12.3 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial DUF4293 PF14126.6 ORF89603 - 0.27 11.5 2.2 0.57 10.4 0.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4293) NOA36 PF06524.12 ORF89419 - 0.039 13.3 0.1 0.047 13.0 0.1 1.2 1 0 0 1 1 1 0 NOA36 protein Polyoma_agno PF01736.16 ORF89419 - 0.085 12.6 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Polyomavirus agnoprotein RF-1 PF00472.20 ORF89203 - 0.054 13.4 0.1 0.067 13.1 0.1 1.1 1 0 0 1 1 1 0 RF-1 domain DUF2207 PF09972.9 ORF89121 - 0.085 11.6 0.8 0.098 11.4 0.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3267 PF11667.8 ORF88623 - 0.058 13.7 0.6 0.08 13.2 0.6 1.2 1 0 0 1 1 1 0 Putative zincin peptidase Inv-AAD PF18785.1 ORF8803 - 0.14 12.0 0.2 0.16 11.8 0.2 1.1 1 0 0 1 1 1 0 Invertebrate-AID/APOBEC-deaminase DUF5553 PF17707.1 ORF87478 - 0.21 11.0 0.0 0.23 10.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5553) MlaC PF05494.12 ORF87236 - 0.2 11.4 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 MlaC protein DUF2024 PF09630.10 ORF87128 - 0.0053 16.6 0.1 0.007 16.2 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF2024) SecE PF00584.20 ORF8673 - 8.6e-14 51.2 0.0 1e-13 51.0 0.0 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex C4 PF01413.19 ORF85899 - 0.034 14.5 0.2 0.042 14.2 0.2 1.2 1 0 0 1 1 1 0 C-terminal tandem repeated domain in type 4 procollagen Ribosomal_L37e PF01907.19 ORF85458 - 0.086 13.0 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L37e DUF3450 PF11932.8 ORF84953 - 4e-05 23.0 6.0 4.1e-05 23.0 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) BRE1 PF08647.11 ORF84953 - 4.1e-05 23.6 6.7 4.1e-05 23.6 6.7 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Spc7 PF08317.11 ORF84953 - 0.00062 18.7 5.9 0.00072 18.5 5.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 ORF84953 - 0.00081 19.9 7.4 0.00096 19.7 7.4 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region Tropomyosin PF00261.20 ORF84953 - 0.0015 18.0 4.8 0.0017 17.8 4.8 1.1 1 0 0 1 1 1 1 Tropomyosin DUF4164 PF13747.6 ORF84953 - 0.0017 18.6 5.1 0.0021 18.3 4.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) Seryl_tRNA_N PF02403.22 ORF84953 - 0.0023 18.1 6.4 0.0027 17.9 6.4 1.1 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain TMF_TATA_bd PF12325.8 ORF84953 - 0.0054 16.9 6.4 0.0056 16.9 6.4 1.0 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Muted PF14942.6 ORF84953 - 0.0063 16.9 5.1 0.0066 16.8 5.1 1.0 1 0 0 1 1 1 1 Organelle biogenesis, Muted-like protein CEP209_CC5 PF16574.5 ORF84953 - 0.0076 16.4 3.4 0.0086 16.2 3.4 1.2 1 0 0 1 1 1 1 Coiled-coil region of centrosome protein CE290 DUF3782 PF12644.7 ORF84953 - 0.0078 16.3 1.8 0.013 15.6 1.6 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3782) JIP_LZII PF16471.5 ORF84953 - 0.0092 16.1 4.6 0.0092 16.1 4.6 1.8 1 1 1 2 2 2 1 JNK-interacting protein leucine zipper II DHR10 PF18595.1 ORF84953 - 0.0096 16.0 5.6 0.011 15.8 5.6 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain IFT57 PF10498.9 ORF84953 - 0.0097 14.9 4.5 0.0094 15.0 4.5 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Atg14 PF10186.9 ORF84953 - 0.014 14.5 4.0 0.015 14.4 4.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Tropomyosin_1 PF12718.7 ORF84953 - 0.015 15.5 6.3 0.018 15.2 6.3 1.1 1 0 0 1 1 1 0 Tropomyosin like DASH_Dad1 PF08649.10 ORF84953 - 0.015 15.4 4.1 0.04 14.1 2.1 2.5 1 1 1 2 2 2 0 DASH complex subunit Dad1 FmiP_Thoc5 PF09766.9 ORF84953 - 0.017 14.5 3.9 0.019 14.3 3.9 1.1 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 HMMR_N PF15905.5 ORF84953 - 0.02 14.4 6.2 0.02 14.4 6.2 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal FapA PF03961.13 ORF84953 - 0.02 13.5 5.3 0.022 13.4 5.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A COG2 PF06148.11 ORF84953 - 0.022 14.8 1.7 0.03 14.4 1.7 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF1664 PF07889.12 ORF84953 - 0.023 14.7 4.2 0.58 10.2 1.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 ORF84953 - 0.027 14.9 1.5 0.036 14.5 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) PI3K_P85_iSH2 PF16454.5 ORF84953 - 0.043 13.4 7.2 0.071 12.7 6.0 1.6 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain NPV_P10 PF05531.12 ORF84953 - 0.046 14.2 4.6 0.067 13.7 4.6 1.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Hormone_1 PF00103.20 ORF84953 - 0.047 13.4 1.2 0.053 13.3 1.2 1.1 1 0 0 1 1 1 0 Somatotropin hormone family ABC_tran_CTD PF16326.5 ORF84953 - 0.054 13.7 8.5 0.093 13.0 8.5 1.5 1 1 0 1 1 1 0 ABC transporter C-terminal domain Allexi_40kDa PF05549.11 ORF84953 - 0.081 12.4 1.7 0.085 12.4 1.7 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein THOC7 PF05615.13 ORF84953 - 0.081 13.2 8.2 0.16 12.2 8.2 1.6 1 1 0 1 1 1 0 Tho complex subunit 7 FemAB PF02388.16 ORF84953 - 0.085 11.7 3.4 0.097 11.5 3.4 1.0 1 0 0 1 1 1 0 FemAB family CLZ PF16526.5 ORF84953 - 0.086 13.2 5.4 0.33 11.3 3.1 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF1515 PF07439.11 ORF84953 - 0.1 12.6 0.5 0.13 12.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) Prefoldin PF02996.17 ORF84953 - 0.12 12.3 8.4 0.25 11.3 3.7 2.0 1 1 1 2 2 2 0 Prefoldin subunit Syntaxin-6_N PF09177.11 ORF84953 - 0.16 12.5 4.2 0.38 11.3 4.1 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF84953 - 0.18 11.6 4.9 0.23 11.3 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) TMPIT PF07851.13 ORF84953 - 0.19 11.0 4.8 0.2 10.9 4.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein BST2 PF16716.5 ORF84953 - 0.23 12.1 6.1 0.38 11.4 4.1 1.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 HAUS6_N PF14661.6 ORF84953 - 0.33 10.5 3.8 0.37 10.3 3.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus YabA PF06156.13 ORF84953 - 0.38 11.4 4.7 0.49 11.1 4.7 1.1 1 0 0 1 1 1 0 Initiation control protein YabA Spc24 PF08286.11 ORF84953 - 0.6 10.4 8.3 1.5 9.1 8.3 1.7 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 XhlA PF10779.9 ORF84953 - 0.9 9.8 6.4 1.7 8.9 6.2 1.6 1 1 0 1 1 1 0 Haemolysin XhlA DivIC PF04977.15 ORF84953 - 1.8 8.4 7.6 3.9 7.3 7.6 1.7 1 1 0 1 1 1 0 Septum formation initiator DUF4199 PF13858.6 ORF84953 - 2.5 8.5 4.8 2.9 8.3 4.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) Homeobox_KN PF05920.11 ORF84908 - 5.3e-17 61.4 0.2 9.1e-17 60.7 0.2 1.3 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF84908 - 3.1e-10 39.7 0.4 4.4e-10 39.3 0.4 1.3 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF84908 - 0.00045 20.0 0.0 0.0015 18.3 0.0 1.7 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_3 PF01381.22 ORF84908 - 0.13 12.3 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix zinc-ribbons_6 PF07191.12 ORF84561 - 1.5e-28 98.6 6.9 1.7e-28 98.4 6.9 1.0 1 0 0 1 1 1 1 zinc-ribbons TF_Zn_Ribbon PF08271.12 ORF84561 - 0.00017 21.0 0.3 0.00017 21.0 0.3 2.6 1 1 1 2 2 2 1 TFIIB zinc-binding DZR PF12773.7 ORF84561 - 0.0016 18.4 10.4 0.0058 16.6 10.4 1.9 1 1 0 1 1 1 1 Double zinc ribbon PolC_DP2 PF03833.13 ORF84561 - 0.0079 14.1 2.4 0.0076 14.2 2.4 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 Auto_anti-p27 PF06677.12 ORF84561 - 0.013 15.6 8.7 0.063 13.4 1.1 2.2 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_4 PF13717.6 ORF84561 - 0.014 15.3 9.5 7.7 6.5 4.6 3.6 2 1 0 2 2 2 0 zinc-ribbon domain Ribosomal_L32p PF01783.23 ORF84561 - 0.034 14.4 0.7 0.034 14.4 0.7 2.2 1 1 1 2 2 2 0 Ribosomal L32p protein family DiS_P_DiS PF06750.13 ORF84561 - 0.053 13.6 9.7 0.32 11.2 0.1 2.9 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain zf-RRPl_C4 PF17026.5 ORF84561 - 0.055 13.6 1.4 0.064 13.4 1.4 1.2 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type HypA PF01155.19 ORF84561 - 0.06 13.4 8.1 0.15 12.1 1.9 2.1 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Elf1 PF05129.13 ORF84561 - 0.14 12.2 6.3 0.55 10.3 6.4 2.1 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Glutaredoxin PF00462.24 ORF84561 - 0.18 12.1 1.6 1 9.6 0.5 2.2 2 0 0 2 2 2 0 Glutaredoxin T4_baseplate PF12322.8 ORF84561 - 0.23 10.9 0.8 0.77 9.2 0.1 1.8 2 0 0 2 2 2 0 T4 bacteriophage base plate protein Med27 PF11571.8 ORF84561 - 0.45 10.9 6.8 0.94 9.9 2.3 2.1 1 1 1 2 2 2 0 Mediator complex subunit 27 zf-ribbon_3 PF13248.6 ORF84561 - 0.46 10.0 13.5 0.15 11.5 2.5 3.6 2 1 1 3 3 3 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 ORF84561 - 0.63 10.0 12.4 2.2 8.3 3.8 3.5 1 1 2 3 3 3 0 SprT-like zinc ribbon domain Ribosomal_S27e PF01667.17 ORF84561 - 0.64 9.8 6.0 0.59 9.9 1.0 2.3 1 1 1 2 2 2 0 Ribosomal protein S27 DNA_ligase_ZBD PF03119.16 ORF84561 - 0.68 10.0 11.5 0.42 10.7 0.6 2.7 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain DNA_RNApol_7kD PF03604.13 ORF84561 - 0.97 9.2 8.1 0.43 10.3 1.1 2.8 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.10 ORF84561 - 1.2 9.3 16.4 6.3 7.0 9.8 3.2 2 2 1 3 3 3 0 Zinc ribbon domain RecR PF02132.15 ORF84561 - 1.5 8.4 7.6 14 5.3 4.4 2.3 1 1 1 2 2 2 0 RecR protein Trm112p PF03966.16 ORF84561 - 2.1 9.0 5.0 11 6.6 0.1 2.5 2 1 1 3 3 3 0 Trm112p-like protein DUF35_N PF12172.8 ORF84561 - 4.1 7.4 12.7 1.8 8.5 3.5 3.2 3 1 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-NADH-PPase PF09297.11 ORF84561 - 8.2 6.2 12.6 0.97 9.2 0.2 3.6 4 0 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain SPAR_C PF11881.8 ORF84128 - 0.045 13.7 1.1 0.051 13.5 1.1 1.0 1 0 0 1 1 1 0 C-terminal domain of SPAR protein DUF2737 PF10930.8 ORF83883 - 0.022 14.3 1.2 0.032 13.8 1.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2737) RRM_1 PF00076.22 ORF83500 - 0.066 13.0 0.0 0.24 11.3 0.0 1.8 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Alpha-E PF04168.12 ORF83463 - 0.04 13.7 0.1 0.04 13.7 0.1 1.0 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. HEM4 PF02602.15 ORF82871 - 0.19 11.1 0.0 0.25 10.6 0.0 1.1 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD LEP503 PF15221.6 ORF82020 - 0.053 13.9 0.0 0.068 13.5 0.0 1.2 1 0 0 1 1 1 0 Lens epithelial cell protein LEP503 zf-UDP PF14569.6 ORF81848 - 0.22 11.7 4.7 0.097 12.8 2.5 1.5 1 1 1 2 2 2 0 Zinc-binding RING-finger DSPn PF14671.6 ORF80756 - 0.15 12.5 1.7 0.16 12.4 1.7 1.1 1 0 0 1 1 1 0 Dual specificity protein phosphatase, N-terminal half CENP-I PF07778.11 ORF79668 - 0.041 12.6 0.3 0.044 12.5 0.3 1.0 1 0 0 1 1 1 0 Mis6 CDH-cyt PF16010.5 ORF79159 - 0.026 14.2 0.6 0.028 14.1 0.6 1.1 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase Sarcoglycan_1 PF04790.13 ORF77995 - 0.091 12.1 0.2 0.086 12.2 0.2 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein ARL6IP6 PF15062.6 ORF77689 - 0.023 14.8 0.1 0.025 14.7 0.1 1.1 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix DUF1811 PF08838.10 ORF77678 - 0.011 16.0 0.2 0.011 15.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1811) adh_short_C2 PF13561.6 ORF77665 - 5e-23 81.9 0.0 5.8e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF77665 - 0.001 18.5 0.0 0.0014 18.1 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase DUF2706 PF10913.8 ORF77425 - 0.57 10.1 2.9 0.19 11.6 0.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2706) Tetraspanin PF00335.20 ORF75936 - 0.038 13.7 0.1 0.04 13.6 0.1 1.0 1 0 0 1 1 1 0 Tetraspanin family DUF4032 PF13224.6 ORF74893 - 0.092 12.6 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4032) Baculo_ODV-E27 PF05314.11 ORF7427 - 0.025 13.8 1.0 0.03 13.5 1.0 1.1 1 0 0 1 1 1 0 Baculovirus occlusion-derived virus envelope protein EC27 DUF4388 PF14332.6 ORF73795 - 0.17 12.1 0.2 0.22 11.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4388) zf-RING_2 PF13639.6 ORF73782 - 1.9e-10 40.9 14.3 2.3e-10 40.6 14.3 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF73782 - 5.8e-08 32.5 14.1 7.9e-08 32.0 14.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF73782 - 1.5e-07 31.2 10.3 1.8e-07 30.9 10.3 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF73782 - 2.1e-07 30.7 14.0 3e-07 30.2 14.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF73782 - 4.2e-07 29.8 12.4 5.2e-07 29.5 12.4 1.1 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF73782 - 1.7e-06 28.0 9.4 1.7e-06 28.0 9.4 1.6 1 1 1 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF73782 - 1.8e-05 24.5 10.7 2.6e-05 24.0 10.7 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 ORF73782 - 0.00013 22.2 13.1 0.0003 21.0 13.1 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF73782 - 0.0002 21.0 4.7 0.0002 21.0 4.7 1.6 2 0 0 2 2 1 1 RING-like zinc finger Siva PF05458.12 ORF73782 - 0.018 14.7 3.5 0.019 14.6 3.5 1.0 1 0 0 1 1 1 0 Cd27 binding protein (Siva) zf-C2H2_6 PF13912.6 ORF73782 - 0.024 14.6 0.2 0.024 14.6 0.2 2.0 2 0 0 2 2 2 0 C2H2-type zinc finger Baculo_IE-1 PF05290.11 ORF73782 - 0.063 13.2 5.4 0.082 12.9 5.4 1.1 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) Zn_ribbon_17 PF17120.5 ORF73782 - 0.16 11.6 11.2 0.28 10.8 11.1 1.4 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF73782 - 0.24 11.5 8.2 0.53 10.4 8.3 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 ORF73782 - 0.25 11.5 14.3 1.3 9.2 14.3 2.1 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-met PF12874.7 ORF73782 - 0.31 11.5 9.1 0.54 10.7 0.2 3.3 3 1 0 3 3 3 0 Zinc-finger of C2H2 type zf-RING_10 PF16685.5 ORF73782 - 1 9.6 11.1 1.5 9.0 11.1 1.4 1 1 0 1 1 1 0 zinc RING finger of MSL2 DUF4469 PF14734.6 ORF73654 - 0.16 12.1 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4469) with IG-like fold Fer4_14 PF13394.6 ORF72659 - 0.33 11.1 3.0 0.39 10.9 3.0 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain RRP14 PF15459.6 ORF71663 - 0.27 11.9 7.2 0.11 13.1 4.9 1.6 1 1 1 2 2 2 0 60S ribosome biogenesis protein Rrp14 DUF2207 PF09972.9 ORF70199 - 0.33 9.7 1.1 0.35 9.6 1.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Mqo PF06039.15 ORF6956 - 1e-08 34.2 0.0 1.1e-08 34.1 0.0 1.0 1 0 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) IL12p40_C PF10420.9 ORF68363 - 0.041 14.4 0.8 0.047 14.2 0.8 1.1 1 0 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus zf-C2HC5 PF06221.13 ORF66087 - 0.88 9.6 16.2 0.2 11.7 11.4 2.3 1 1 2 3 3 3 0 Putative zinc finger motif, C2HC5-type Flavi_DEAD PF07652.14 ORF65704 - 0.024 14.6 0.0 0.028 14.4 0.0 1.1 1 0 0 1 1 1 0 Flavivirus DEAD domain Beta-TrCP_D PF12125.8 ORF65676 - 0.06 13.2 0.5 0.15 12.0 0.5 1.7 1 0 0 1 1 1 0 D domain of beta-TrCP HscB_4_cys PF18256.1 ORF65676 - 0.13 12.1 5.7 0.94 9.4 5.7 2.2 1 1 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif Inv-AAD PF18785.1 ORF65348 - 0.73 9.7 7.7 3.2 7.6 0.6 2.5 1 1 1 2 2 2 0 Invertebrate-AID/APOBEC-deaminase APO_RNA-bind PF05634.11 ORF65067 - 0.081 12.3 0.1 0.088 12.2 0.1 1.1 1 0 0 1 1 1 0 APO RNA-binding Csm2_III-A PF03750.13 ORF6369 - 0.045 14.6 1.1 0.05 14.5 1.1 1.1 1 0 0 1 1 1 0 Csm2 Type III-A TPR_5 PF12688.7 ORF63513 - 0.0094 16.2 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 1 Tetratrico peptide repeat DUF3437 PF11919.8 ORF63482 - 0.15 12.0 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DnaA_N PF11638.8 ORF63462 - 0.0024 17.6 0.2 0.13 12.1 0.0 2.3 2 0 0 2 2 2 2 DnaA N-terminal domain DUF4635 PF15466.6 ORF63462 - 0.062 12.8 1.2 0.15 11.6 1.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4635) DUF99 PF01949.16 ORF62298 - 0.012 15.0 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF99 DUF5554 PF17709.1 ORF62202 - 0.049 13.7 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5554) EF-hand_6 PF13405.6 ORF62040 - 0.012 15.5 0.4 0.022 14.7 0.4 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 ORF62040 - 0.068 13.6 0.0 0.071 13.6 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain pair # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks324.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks324.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks324.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks324.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4118 PF13493.6 ORF60901 - 0.22 11.3 3.2 0.25 11.2 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) BslA PF17735.1 ORF60098 - 0.098 12.7 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Biofilm surface layer A DUF4187 PF13821.6 ORF59942 - 0.011 15.5 0.4 0.019 14.7 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) DMA PF03474.14 ORF59299 - 0.1 12.2 0.1 0.25 11.0 0.1 1.8 1 1 0 1 1 1 0 DMRTA motif MREG PF15812.5 ORF59031 - 0.029 14.7 0.0 0.033 14.5 0.0 1.1 1 0 0 1 1 1 0 Melanoregulin IRK PF01007.20 ORF58391 - 0.049 13.5 3.7 0.058 13.2 3.7 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain Ntox28 PF15605.6 ORF58317 - 0.026 14.7 0.5 0.079 13.2 0.2 1.7 1 1 1 2 2 2 0 Bacterial toxin 28 CdiA_C PF18451.1 ORF58317 - 0.045 14.0 1.7 0.06 13.6 1.7 1.3 1 1 0 1 1 1 0 Contact-dependent growth inhibition CdiA C-terminal domain DUF3585 PF12130.8 ORF58309 - 0.051 13.7 0.2 0.057 13.6 0.2 1.1 1 0 0 1 1 1 0 Bivalent Mical/EHBP Rab binding domain PAP_assoc PF03828.19 ORF58053 - 0.03 14.5 0.3 0.045 14.0 0.3 1.4 1 1 0 1 1 1 0 Cid1 family poly A polymerase SMC_N PF02463.19 ORF58037 - 4.1e-17 62.4 0.7 4.9e-17 62.1 0.7 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain p12I PF12233.8 ORF57728 - 0.0051 17.3 1.1 0.0066 16.9 1.1 1.3 1 1 0 1 1 1 1 Human adult T cell leukemia/lymphoma virus protein Fumarate_red_C PF02300.17 ORF57726 - 0.017 15.2 1.9 0.019 15.0 1.9 1.0 1 0 0 1 1 1 0 Fumarate reductase subunit C Orai-1 PF07856.12 ORF57726 - 0.11 12.1 2.7 0.15 11.7 2.7 1.2 1 0 0 1 1 1 0 Mediator of CRAC channel activity Ferlin_C PF16165.5 ORF57726 - 1.7 8.5 5.9 0.33 10.9 2.1 1.7 1 1 1 2 2 2 0 Ferlin C-terminus Nop25 PF09805.9 ORF57401 - 0.61 10.6 14.7 0.66 10.4 14.7 1.1 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) Goodbye PF17109.5 ORF57401 - 0.97 9.9 3.5 0.74 10.3 2.5 1.3 1 1 0 1 1 1 0 fungal STAND N-terminal Goodbye domain Pes-10 PF07149.11 ORF57401 - 5.4 6.0 14.1 6.6 5.7 14.1 1.0 1 0 0 1 1 1 0 Pes-10 Rol_Rep_N PF18106.1 ORF57060 - 0.096 13.0 0.3 0.15 12.4 0.2 1.4 2 0 0 2 2 2 0 Rolling Circle replication initiation protein N-terminal domain cNMP_binding PF00027.29 ORF54166 - 1.5e-14 53.8 0.0 1.9e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain 2TM PF13239.6 ORF53805 - 0.61 10.4 7.8 0.28 11.5 5.8 1.4 2 0 0 2 2 2 0 2TM domain CX9C PF16860.5 ORF53690 - 0.053 13.5 0.0 0.069 13.2 0.0 1.2 1 0 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, IL1 PF00340.19 ORF53542 - 0.05 13.3 0.0 0.32 10.7 0.0 1.9 2 0 0 2 2 2 0 Interleukin-1 / 18 DUF3102 PF11300.8 ORF53304 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3102) DUF3704 PF12488.8 ORF53304 - 0.41 10.3 0.2 0.41 10.3 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3704) IL1 PF00340.19 ORF53150 - 0.05 13.3 0.0 0.32 10.7 0.0 1.9 2 0 0 2 2 2 0 Interleukin-1 / 18 Interfer-bind PF09294.10 ORF53029 - 0.024 14.9 0.6 0.024 14.9 0.6 1.4 2 0 0 2 2 2 0 Interferon-alpha/beta receptor, fibronectin type III Insulin PF00049.18 ORF52935 - 0.002 19.1 0.3 0.002 19.1 0.3 1.6 2 0 0 2 2 2 1 Insulin/IGF/Relaxin family DUF2173 PF09941.9 ORF52935 - 0.15 12.4 1.0 0.16 12.3 1.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2173) SF3b10 PF07189.11 ORF52462 - 1.1e-33 115.2 0.5 1.2e-33 115.1 0.5 1.0 1 0 0 1 1 1 1 Splicing factor 3B subunit 10 (SF3b10) Oxidoreduct_C PF16490.5 ORF52462 - 0.075 12.7 0.2 0.078 12.7 0.2 1.1 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain AdoHcyase_NAD PF00670.21 ORF52462 - 0.13 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain UCR_TM PF02921.14 ORF5225 - 1.7 9.2 4.5 1.6 9.2 0.4 2.2 1 1 1 2 2 2 0 Ubiquinol cytochrome reductase transmembrane region Mtr2 PF10429.9 ORF51546 - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 TMEM43 PF07787.12 ORF51133 - 0.1 11.9 0.6 0.11 11.9 0.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 Elicitin PF00964.17 ORF4880 - 0.0087 16.1 0.7 0.011 15.9 0.7 1.2 1 0 0 1 1 1 1 Elicitin YrvL PF14184.6 ORF48694 - 0.16 12.1 9.2 0.36 10.9 9.1 1.7 1 1 0 1 1 1 0 Regulatory protein YrvL DUF1996 PF09362.10 ORF4746 - 0.06 13.3 0.9 0.063 13.3 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1996) YuiB PF14068.6 ORF46086 - 0.056 14.0 0.1 0.063 13.9 0.1 1.1 1 0 0 1 1 1 0 Putative membrane protein DUF761 PF05553.11 ORF45868 - 5.2 6.7 6.8 16 5.2 0.3 3.0 3 0 0 3 3 3 0 Cotton fibre expressed protein Ion_trans PF00520.31 ORF45780 - 4.5e-07 29.4 2.3 5.8e-07 29.0 2.3 1.2 1 0 0 1 1 1 1 Ion transport protein DUF2976 PF11190.8 ORF45780 - 0.00057 19.6 0.1 0.00064 19.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2976) SieB PF14163.6 ORF45780 - 0.016 14.7 0.3 0.016 14.7 0.3 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B PKD_channel PF08016.12 ORF45780 - 0.1 11.2 2.7 0.12 11.0 2.7 1.1 1 0 0 1 1 1 0 Polycystin cation channel DUF3937 PF13073.6 ORF45641 - 0.029 14.5 0.3 0.053 13.6 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3937) DUF4510 PF14971.6 ORF4543 - 0.0023 18.3 0.4 0.0024 18.2 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4510) FUSC PF04632.12 ORF4543 - 0.046 12.3 1.0 0.047 12.2 1.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Phage_H_T_join PF05521.11 ORF4515 - 0.059 13.9 0.3 0.063 13.8 0.3 1.1 1 0 0 1 1 1 0 Phage head-tail joining protein Sarcoglycan_1 PF04790.13 ORF45108 - 0.029 13.7 1.5 0.034 13.5 1.5 1.0 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein Rad60-SLD PF11976.8 ORF42884 - 3.4e-14 52.4 2.8 1.6e-07 31.0 0.1 2.0 1 1 1 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 ORF42884 - 0.029 14.1 0.2 0.72 9.6 0.2 2.0 1 1 0 1 1 1 0 Ubiquitin family F-box PF00646.33 ORF42419 - 0.019 14.8 0.1 0.037 13.9 0.1 1.5 1 0 0 1 1 1 0 F-box domain Mei5_like PF17021.5 ORF41518 - 0.023 14.7 0.3 0.054 13.5 0.1 1.6 2 0 0 2 2 2 0 Putative double-strand recombination repair-like Rab15_effector PF15208.6 ORF41518 - 0.029 13.7 0.0 0.033 13.5 0.0 1.1 1 0 0 1 1 1 0 Rab15 effector DUF4817 PF16087.5 ORF41274 - 0.039 13.7 0.2 0.073 12.9 0.2 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) SPATA19 PF15212.6 ORF4120 - 0.15 12.3 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial Peptidase_C1 PF00112.23 ORF40893 - 6.2e-16 59.2 0.1 6.7e-16 59.0 0.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease DUF5554 PF17709.1 ORF40491 - 0.049 13.7 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5554) FXa_inhibition PF14670.6 ORF4000 - 0.023 15.0 3.8 0.045 14.0 3.8 1.6 1 1 0 1 1 1 0 Coagulation Factor Xa inhibitory site RSF PF14876.6 ORF39765 - 0.043 12.8 0.7 0.048 12.6 0.7 1.0 1 0 0 1 1 1 0 Respiratory growth transcriptional regulator DUF913 PF06025.12 ORF38664 - 0.069 12.1 4.0 0.075 12.0 4.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Adipogenin PF15202.6 ORF38122 - 0.065 13.3 0.5 2.1 8.4 0.4 2.1 1 1 1 2 2 2 0 Adipogenin RNA_pol_Rpb1_4 PF05000.17 ORF3808 - 0.09 12.7 0.1 0.12 12.3 0.1 1.3 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 4 DUF4364 PF14277.6 ORF3808 - 0.14 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DUF4871 PF16167.5 ORF37599 - 0.094 12.7 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) TFIIF_beta_N PF17683.1 ORF37519 - 0.0011 19.6 0.1 0.0013 19.4 0.1 1.1 1 0 0 1 1 1 1 TFIIF, beta subunit N-terminus DUF2045 PF09741.9 ORF37252 - 0.058 12.8 0.2 0.069 12.5 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2045) DUF4596 PF15363.6 ORF37245 - 0.26 11.6 1.4 0.39 11.0 1.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4596) DUF3432 PF11914.8 ORF36325 - 0.04 14.1 0.6 0.042 14.1 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) Imm39 PF15568.6 ORF36201 - 0.072 13.2 0.1 0.12 12.5 0.1 1.3 1 1 0 1 1 1 0 Immunity protein 39 DUF4871 PF16167.5 ORF36079 - 0.094 12.7 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) Synapsin_N PF10581.9 ORF36050 - 0.33 10.9 0.2 0.33 10.9 0.2 2.4 2 0 0 2 2 2 0 Synapsin N-terminal MTBP_N PF14918.6 ORF35886 - 0.21 11.0 0.0 0.24 10.8 0.0 1.0 1 0 0 1 1 1 0 MDM2-binding DUF1811 PF08838.10 ORF35661 - 0.011 16.0 0.2 0.011 15.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1811) DSPn PF14671.6 ORF35611 - 0.15 12.5 1.7 0.16 12.4 1.7 1.1 1 0 0 1 1 1 0 Dual specificity protein phosphatase, N-terminal half PUF PF00806.19 ORF35350 - 8.9e-08 31.4 0.8 0.00035 20.1 0.1 2.3 2 0 0 2 2 2 2 Pumilio-family RNA binding repeat CdhD PF03599.16 ORF35350 - 0.021 13.6 0.0 0.021 13.6 0.0 1.0 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit DUF2628 PF10947.8 ORF34259 - 0.28 11.6 1.6 0.43 10.9 1.2 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2628) SNN_linker PF09050.10 ORF33818 - 0.025 14.4 0.4 0.025 14.4 0.4 1.9 2 0 0 2 2 2 0 Stannin unstructured linker CCDC85 PF10226.9 ORF33752 - 0.0027 17.4 2.0 0.003 17.3 2.0 1.1 1 0 0 1 1 1 1 CCDC85 family K-box PF01486.17 ORF33752 - 0.0043 17.2 4.7 0.008 16.3 4.7 1.5 1 0 0 1 1 1 1 K-box region DUF1465 PF07323.12 ORF33752 - 0.044 13.6 2.0 0.051 13.4 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Pinin_SDK_memA PF04696.13 ORF33752 - 0.11 12.5 7.6 0.13 12.3 7.6 1.1 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region HAUS6_N PF14661.6 ORF33752 - 0.92 9.0 6.8 1 8.9 6.8 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus YqjK PF13997.6 ORF33178 - 0.08 13.2 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 YqjK-like protein MFS_1 PF07690.16 ORF32844 - 0.061 12.2 5.1 0.062 12.2 5.1 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily RDD PF06271.12 ORF32844 - 0.094 12.9 5.1 0.12 12.6 5.1 1.1 1 0 0 1 1 1 0 RDD family DUF5381 PF17353.2 ORF32844 - 0.35 10.6 8.6 0.41 10.4 8.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5381) DUF872 PF05915.12 ORF32844 - 0.88 9.7 5.0 1.1 9.5 5.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Anth_Ig PF05587.13 ORF32454 - 0.029 14.7 0.1 0.031 14.6 0.1 1.1 1 0 0 1 1 1 0 Anthrax receptor extracellular domain ARL6IP6 PF15062.6 ORF31850 - 0.023 14.8 0.1 0.025 14.7 0.1 1.1 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix Croc_4 PF17691.1 ORF31612 - 0.26 11.3 4.0 0.35 10.9 3.6 1.4 1 1 0 1 1 1 0 Contingent replication of cDNA 4 Ribosomal_S13_N PF08069.12 ORF3133 - 0.46 10.6 5.9 0.88 9.7 0.3 2.4 1 1 1 2 2 2 0 Ribosomal S13/S15 N-terminal domain Prenyltrans PF00432.21 ORF30885 - 1.8e-13 50.0 0.0 2.3e-13 49.6 0.0 1.2 1 0 0 1 1 1 1 Prenyltransferase and squalene oxidase repeat DrsE_2 PF13686.6 ORF30885 - 0.1 12.5 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 DsrE/DsrF/DrsH-like family DUF4395 PF14340.6 ORF30800 - 2.6 8.4 13.6 4.6 7.6 13.4 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4395) DUF2306 PF10067.9 ORF30477 - 0.029 14.6 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2306) Tim29 PF10171.9 ORF30476 - 0.076 12.5 0.1 0.084 12.4 0.1 1.1 1 0 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 MINDY_DUB PF04424.13 ORF30245 - 0.062 13.3 0.1 0.099 12.7 0.1 1.3 1 1 0 1 1 1 0 MINDY deubiquitinase AAA_6 PF12774.7 ORF30206 - 7.8e-18 64.5 0.0 8.4e-18 64.4 0.0 1.0 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region Pox_Ag35 PF03286.14 ORF30146 - 0.045 13.5 4.0 0.052 13.3 4.0 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein MAAL_N PF05034.13 ORF30018 - 0.059 13.0 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus Ribonuc_red_lgN PF00317.21 ORF30018 - 0.099 12.7 0.4 0.13 12.3 0.4 1.2 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain Flavi_DEAD PF07652.14 ORF29977 - 0.024 14.6 0.0 0.028 14.4 0.0 1.1 1 0 0 1 1 1 0 Flavivirus DEAD domain DUF3450 PF11932.8 ORF29835 - 4e-05 23.0 6.0 4.1e-05 23.0 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) BRE1 PF08647.11 ORF29835 - 4.1e-05 23.6 6.7 4.1e-05 23.6 6.7 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Spc7 PF08317.11 ORF29835 - 0.00062 18.7 5.9 0.00072 18.5 5.9 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 ORF29835 - 0.00081 19.9 7.4 0.00096 19.7 7.4 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region Tropomyosin PF00261.20 ORF29835 - 0.0015 18.0 4.8 0.0017 17.8 4.8 1.1 1 0 0 1 1 1 1 Tropomyosin DUF4164 PF13747.6 ORF29835 - 0.0017 18.6 5.1 0.0021 18.3 4.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4164) Seryl_tRNA_N PF02403.22 ORF29835 - 0.0023 18.1 6.4 0.0027 17.9 6.4 1.1 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain TMF_TATA_bd PF12325.8 ORF29835 - 0.0054 16.9 6.4 0.0056 16.9 6.4 1.0 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Muted PF14942.6 ORF29835 - 0.0063 16.9 5.1 0.0066 16.8 5.1 1.0 1 0 0 1 1 1 1 Organelle biogenesis, Muted-like protein CEP209_CC5 PF16574.5 ORF29835 - 0.0076 16.4 3.4 0.0086 16.2 3.4 1.2 1 0 0 1 1 1 1 Coiled-coil region of centrosome protein CE290 DUF3782 PF12644.7 ORF29835 - 0.0078 16.3 1.8 0.013 15.6 1.6 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3782) JIP_LZII PF16471.5 ORF29835 - 0.0092 16.1 4.6 0.0092 16.1 4.6 1.8 1 1 1 2 2 2 1 JNK-interacting protein leucine zipper II DHR10 PF18595.1 ORF29835 - 0.0096 16.0 5.6 0.011 15.8 5.6 1.1 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain IFT57 PF10498.9 ORF29835 - 0.0097 14.9 4.5 0.0094 15.0 4.5 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Atg14 PF10186.9 ORF29835 - 0.014 14.5 4.0 0.015 14.4 4.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Tropomyosin_1 PF12718.7 ORF29835 - 0.015 15.5 6.3 0.018 15.2 6.3 1.1 1 0 0 1 1 1 0 Tropomyosin like DASH_Dad1 PF08649.10 ORF29835 - 0.015 15.4 4.1 0.04 14.1 2.1 2.5 1 1 1 2 2 2 0 DASH complex subunit Dad1 FmiP_Thoc5 PF09766.9 ORF29835 - 0.017 14.5 3.9 0.019 14.3 3.9 1.1 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 HMMR_N PF15905.5 ORF29835 - 0.02 14.4 6.2 0.02 14.4 6.2 1.0 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal FapA PF03961.13 ORF29835 - 0.02 13.5 5.3 0.022 13.4 5.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A COG2 PF06148.11 ORF29835 - 0.022 14.8 1.7 0.03 14.4 1.7 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF1664 PF07889.12 ORF29835 - 0.023 14.7 4.2 0.58 10.2 1.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 ORF29835 - 0.027 14.9 1.5 0.036 14.5 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) PI3K_P85_iSH2 PF16454.5 ORF29835 - 0.043 13.4 7.2 0.071 12.7 6.0 1.6 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain NPV_P10 PF05531.12 ORF29835 - 0.046 14.2 4.6 0.067 13.7 4.6 1.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Hormone_1 PF00103.20 ORF29835 - 0.047 13.4 1.2 0.053 13.3 1.2 1.1 1 0 0 1 1 1 0 Somatotropin hormone family ABC_tran_CTD PF16326.5 ORF29835 - 0.054 13.7 8.5 0.093 13.0 8.5 1.5 1 1 0 1 1 1 0 ABC transporter C-terminal domain Allexi_40kDa PF05549.11 ORF29835 - 0.081 12.4 1.7 0.085 12.4 1.7 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein THOC7 PF05615.13 ORF29835 - 0.081 13.2 8.2 0.16 12.2 8.2 1.6 1 1 0 1 1 1 0 Tho complex subunit 7 FemAB PF02388.16 ORF29835 - 0.085 11.7 3.4 0.097 11.5 3.4 1.0 1 0 0 1 1 1 0 FemAB family CLZ PF16526.5 ORF29835 - 0.086 13.2 5.4 0.33 11.3 3.1 2.1 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF1515 PF07439.11 ORF29835 - 0.1 12.6 0.5 0.13 12.4 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) Prefoldin PF02996.17 ORF29835 - 0.12 12.3 8.4 0.25 11.3 3.7 2.0 1 1 1 2 2 2 0 Prefoldin subunit Syntaxin-6_N PF09177.11 ORF29835 - 0.16 12.5 4.2 0.38 11.3 4.1 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF29835 - 0.18 11.6 4.9 0.23 11.3 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) TMPIT PF07851.13 ORF29835 - 0.19 11.0 4.8 0.2 10.9 4.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein BST2 PF16716.5 ORF29835 - 0.23 12.1 6.1 0.38 11.4 4.1 1.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 HAUS6_N PF14661.6 ORF29835 - 0.33 10.5 3.8 0.37 10.3 3.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus YabA PF06156.13 ORF29835 - 0.38 11.4 4.7 0.49 11.1 4.7 1.1 1 0 0 1 1 1 0 Initiation control protein YabA Spc24 PF08286.11 ORF29835 - 0.6 10.4 8.3 1.5 9.1 8.3 1.7 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 XhlA PF10779.9 ORF29835 - 0.9 9.8 6.4 1.7 8.9 6.2 1.6 1 1 0 1 1 1 0 Haemolysin XhlA DivIC PF04977.15 ORF29835 - 1.8 8.4 7.6 3.9 7.3 7.6 1.7 1 1 0 1 1 1 0 Septum formation initiator DUF4199 PF13858.6 ORF29835 - 2.5 8.5 4.8 2.9 8.3 4.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) RecT PF03837.14 ORF29697 - 0.025 14.1 0.1 0.029 13.8 0.1 1.2 1 0 0 1 1 1 0 RecT family Het-C PF07217.11 ORF29697 - 0.057 12.0 0.0 0.065 11.8 0.0 1.0 1 0 0 1 1 1 0 Heterokaryon incompatibility protein Het-C Gliadin PF13016.6 ORF29193 - 0.4 11.1 9.4 0.73 10.3 9.5 1.4 1 1 0 1 1 1 0 Cys-rich Gliadin N-terminal Mtr2 PF10429.9 ORF29015 - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 Tissue_fac PF01108.17 ORF28980 - 0.093 12.6 0.1 0.096 12.5 0.1 1.1 1 0 0 1 1 1 0 Tissue factor Pombe_5TM PF09437.10 ORF28661 - 0.00041 20.1 3.8 0.00041 20.1 3.8 1.1 1 0 0 1 1 1 1 Pombe specific 5TM protein p31comet PF06581.12 ORF28227 - 0.099 11.8 0.1 0.13 11.4 0.1 1.1 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding LMP PF04778.12 ORF28008 - 0.023 14.6 1.4 0.028 14.3 1.4 1.1 1 0 0 1 1 1 0 LMP repeated region DDA1 PF10172.9 ORF28008 - 0.057 13.7 0.4 0.089 13.1 0.4 1.5 1 1 0 1 1 1 0 Det1 complexing ubiquitin ligase DUF4116 PF13475.6 ORF27505 - 1.1e-38 130.7 0.0 1e-15 57.2 0.0 2.5 1 1 2 3 3 3 3 Domain of unknown function (DUF4116) Fumarate_red_C PF02300.17 ORF27158 - 0.017 15.2 1.9 0.019 15.0 1.9 1.0 1 0 0 1 1 1 0 Fumarate reductase subunit C Orai-1 PF07856.12 ORF27158 - 0.11 12.1 2.7 0.15 11.7 2.7 1.2 1 0 0 1 1 1 0 Mediator of CRAC channel activity Ferlin_C PF16165.5 ORF27158 - 1.7 8.5 5.9 0.33 10.9 2.1 1.7 1 1 1 2 2 2 0 Ferlin C-terminus DUF4428 PF14471.6 ORF26948 - 0.079 12.9 0.5 0.079 12.9 0.5 2.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4428) IL4 PF00727.18 ORF25994 - 0.073 13.3 1.5 0.08 13.2 1.5 1.1 1 0 0 1 1 1 0 Interleukin 4 MARVEL PF01284.23 ORF25584 - 0.0084 16.1 5.5 0.0093 16.0 5.5 1.1 1 0 0 1 1 1 1 Membrane-associating domain DUF4389 PF14333.6 ORF25584 - 0.41 10.6 7.0 0.086 12.8 1.9 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) MRAP PF15183.6 ORF25584 - 3.9 7.5 13.1 1.4 8.9 0.5 2.1 1 1 1 2 2 2 0 Melanocortin-2 receptor accessory protein family SUR7 PF06687.12 ORF25584 - 4.9 6.7 12.9 6 6.4 12.9 1.1 1 0 0 1 1 1 0 SUR7/PalI family Pkr1 PF08636.10 ORF25584 - 6.1 7.1 15.0 2.9 8.1 12.4 1.7 1 1 1 2 2 2 0 ER protein Pkr1 Actin PF00022.19 ORF25074 - 1e-08 34.2 0.0 1e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 Actin Baculo_LEF5_C PF11792.8 ORF25074 - 0.064 12.9 0.1 0.14 11.9 0.1 1.6 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 C-terminal domain DUF1736 PF08409.11 ORF24441 - 0.39 10.7 5.2 0.56 10.2 4.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1736) zf-RING-like PF08746.11 ORF24234 - 0.064 13.6 0.1 0.095 13.0 0.1 1.3 1 0 0 1 1 1 0 RING-like domain SusD-like PF12741.7 ORF24234 - 0.068 12.0 0.1 0.077 11.9 0.1 1.0 1 0 0 1 1 1 0 Susd and RagB outer membrane lipoprotein DUF4196 PF13846.6 ORF23711 - 4.7e-05 23.6 6.6 0.00097 19.3 0.6 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4196) Cellulase PF00150.18 ORF21799 - 0.016 14.7 0.3 0.016 14.7 0.3 1.0 1 0 0 1 1 1 0 Cellulase (glycosyl hydrolase family 5) DUF2045 PF09741.9 ORF21689 - 0.085 12.2 0.2 0.088 12.2 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2045) DUF442 PF04273.13 ORF21629 - 0.36 10.9 1.7 1.3 9.2 1.7 1.8 1 1 0 1 1 1 0 Putative phosphatase (DUF442) YihI PF04220.12 ORF21270 - 0.037 13.7 0.5 0.04 13.6 0.5 1.2 1 0 0 1 1 1 0 Der GTPase activator (YihI) Titin_Ig-rpts PF06582.12 ORF21270 - 0.11 12.4 0.5 0.24 11.3 0.5 1.6 1 0 0 1 1 1 0 Titin repeat RRM_1 PF00076.22 ORF21133 - 4.9e-12 45.5 0.1 7.4e-12 44.9 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 ORF21133 - 0.025 14.6 0.3 0.042 13.8 0.3 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif DUF1242 PF06842.12 ORF21040 - 0.43 10.4 3.9 6.3 6.7 0.6 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1242) DUF2371 PF10177.9 ORF21040 - 9.2 6.4 6.7 3.4 7.8 0.3 2.3 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2371) Tim29 PF10171.9 ORF20713 - 0.076 12.5 0.1 0.084 12.4 0.1 1.1 1 0 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 IceA2 PF05862.11 ORF20226 - 0.1 12.6 0.3 1.4 8.9 0.1 2.2 1 1 1 2 2 2 0 Helicobacter pylori IceA2 protein Methyltr_RsmB-F PF01189.17 ORF19196 - 8.3e-10 38.6 0.1 9.1e-10 38.5 0.1 1.0 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F TSGA13 PF14994.6 ORF19196 - 0.068 12.5 1.6 0.067 12.6 0.8 1.4 1 1 0 1 1 1 0 Testis-specific gene 13 protein Trans_reg_C PF00486.28 ORF19119 - 0.006 16.6 0.0 0.008 16.2 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal UQ_con PF00179.26 ORF18894 - 1.3e-20 73.5 0.0 1.4e-20 73.4 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme BRCA-2_OB3 PF09104.10 ORF18687 - 0.05 13.3 0.1 0.056 13.1 0.1 1.1 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 C1_1 PF00130.22 ORF18400 - 0.059 13.3 6.0 0.089 12.7 6.0 1.5 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF5346 PF17281.2 ORF18034 - 0.11 12.5 0.7 0.13 12.3 0.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5346) Histone_HNS PF00816.21 ORF17892 - 0.16 12.8 0.0 0.19 12.5 0.0 1.2 1 0 0 1 1 1 0 H-NS histone family MtrA PF04208.14 ORF17231 - 0.2 11.3 0.0 0.27 10.9 0.0 1.4 1 1 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit A SelK_SelG PF10961.8 ORF17042 - 1.7e-05 25.3 1.8 2.2e-05 25.0 1.8 1.1 1 0 0 1 1 1 1 Selenoprotein SelK_SelG CaMBD PF02888.16 ORF16212 - 0.046 13.9 1.5 0.065 13.4 1.5 1.3 1 0 0 1 1 1 0 Calmodulin binding domain FtsX PF02687.21 ORF16097 - 0.22 12.0 3.6 0.32 11.5 3.6 1.4 1 1 0 1 1 1 0 FtsX-like permease family DUF442 PF04273.13 ORF15780 - 0.36 10.9 1.7 1.3 9.2 1.7 1.8 1 1 0 1 1 1 0 Putative phosphatase (DUF442) Mito_carr PF00153.27 ORF15754 - 2.8e-15 56.0 0.1 3.1e-15 55.9 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein CxC4 PF18717.1 ORF15594 - 0.064 13.1 2.4 0.08 12.8 2.4 1.1 1 0 0 1 1 1 0 CxC4 like cysteine cluster associated with KDZ transposases Mlo PF03094.15 ORF152886 - 0.057 11.8 2.7 0.06 11.7 2.7 1.0 1 0 0 1 1 1 0 Mlo family Phage_GPA PF05840.13 ORF152671 - 0.027 13.6 0.2 0.027 13.6 0.2 1.1 1 0 0 1 1 1 0 Bacteriophage replication gene A protein (GPA) Med31 PF05669.12 ORF152156 - 0.015 15.3 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 SOH1 DUF2370 PF10176.9 ORF149600 - 0.18 11.4 0.8 0.26 10.9 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) Ezh2_MCSS PF18600.1 ORF149476 - 0.14 11.7 1.7 0.39 10.4 0.7 2.3 2 1 0 2 2 2 0 MCSS domain Lipoprotein_11 PF03260.13 ORF149375 - 0.039 13.3 0.1 0.043 13.2 0.1 1.1 1 0 0 1 1 1 0 Lepidopteran low molecular weight (30 kD) lipoprotein Potass_KdpF PF09604.10 ORF148857 - 0.0001 22.2 6.0 0.00021 21.2 6.0 1.6 1 0 0 1 1 1 1 F subunit of K+-transporting ATPase (Potass_KdpF) HemY_N PF07219.13 ORF148857 - 1.4 9.2 3.3 1.3 9.2 1.6 1.6 2 0 0 2 2 2 0 HemY protein N-terminus PBC PF03792.13 ORF148354 - 0.049 13.4 0.0 0.055 13.2 0.0 1.1 1 0 0 1 1 1 0 PBC domain Reo_P9 PF06043.11 ORF148354 - 0.071 12.5 0.1 0.076 12.4 0.1 1.0 1 0 0 1 1 1 0 Reovirus P9-like family GST_C_2 PF13410.6 ORF148354 - 0.085 12.9 0.0 0.18 11.8 0.0 1.6 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF148354 - 0.1 12.8 0.1 0.18 12.0 0.1 1.5 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain RRP14 PF15459.6 ORF147727 - 0.27 11.9 7.2 0.11 13.1 4.9 1.6 1 1 1 2 2 2 0 60S ribosome biogenesis protein Rrp14 NDUF_B7 PF05676.13 ORF147490 - 0.055 13.2 0.0 0.086 12.6 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) AidB_N PF18158.1 ORF147333 - 0.74 9.7 5.5 0.57 10.1 0.3 2.0 1 1 1 2 2 2 0 Adaptive response protein AidB N-terminal domain DUF3742 PF12553.8 ORF146224 - 0.83 9.8 3.3 0.99 9.5 3.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) YuiB PF14068.6 ORF145958 - 0.0026 18.3 6.5 0.0033 18.0 6.5 1.2 1 0 0 1 1 1 1 Putative membrane protein zf-H2C2_5 PF13909.6 ORF145229 - 0.19 11.5 2.1 0.34 10.7 2.1 1.5 1 0 0 1 1 1 0 C2H2-type zinc-finger domain UPF0167 PF03691.14 ORF143840 - 0.071 12.9 0.0 0.085 12.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0167) Sarcoglycan_1 PF04790.13 ORF143818 - 0.091 12.1 0.2 0.086 12.2 0.2 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein PNRC PF15365.6 ORF143706 - 0.38 10.6 2.4 0.68 9.8 2.4 1.4 1 0 0 1 1 1 0 Proline-rich nuclear receptor coactivator motif START PF01852.19 ORF143172 - 0.082 12.3 0.3 0.1 12.0 0.3 1.1 1 0 0 1 1 1 0 START domain CaMBD PF02888.16 ORF14268 - 0.046 13.9 1.5 0.065 13.4 1.5 1.3 1 0 0 1 1 1 0 Calmodulin binding domain NUDIX PF00293.28 ORF14251 - 0.041 13.9 0.1 0.041 13.9 0.1 1.2 1 0 0 1 1 1 0 NUDIX domain UPF0227 PF05728.12 ORF142392 - 1.2e-23 84.0 0.3 1.3e-23 83.9 0.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) DUF3377 PF11857.8 ORF140087 - 5.7 6.9 6.0 29 4.7 2.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) DUF5554 PF17709.1 ORF139938 - 0.049 13.7 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5554) Toxin_20 PF08089.11 ORF139694 - 0.092 12.9 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 Huwentoxin-II family Peptidase_S9 PF00326.21 ORF139455 - 2e-14 53.6 0.0 2.2e-14 53.4 0.0 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 ORF139455 - 1.5e-06 27.9 0.0 1.7e-06 27.7 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family FSH1 PF03959.13 ORF139455 - 0.00023 20.9 0.0 0.00026 20.7 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Hydrolase_4 PF12146.8 ORF139455 - 0.0047 16.2 0.0 0.0053 16.1 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 ORF139455 - 0.019 14.8 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase MAAL_N PF05034.13 ORF139254 - 0.059 13.0 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase N-terminus Ribonuc_red_lgN PF00317.21 ORF139254 - 0.099 12.7 0.4 0.13 12.3 0.4 1.2 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain DUF4595 PF15283.6 ORF138179 - 0.13 12.3 0.2 0.14 12.2 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4595) with porin-like fold DUF2481 PF10654.9 ORF137806 - 0.11 12.5 2.7 0.12 12.4 1.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2481) Glutaredoxin PF00462.24 ORF137052 - 2.9e-24 85.0 0.0 3.4e-24 84.8 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 ORF137052 - 6.2e-07 29.7 0.0 7.1e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF137052 - 4.7e-05 23.6 0.0 5.8e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain DUF836 PF05768.14 ORF137052 - 0.0006 20.2 0.0 0.0008 19.8 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) SH3BGR PF04908.15 ORF137052 - 0.0022 18.1 0.0 0.0035 17.5 0.0 1.3 1 1 0 1 1 1 1 SH3-binding, glutamic acid-rich protein Thioredoxin_3 PF13192.6 ORF137052 - 0.021 14.9 0.0 0.034 14.2 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin domain GST_N PF02798.20 ORF137052 - 0.021 15.1 0.0 0.024 15.0 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.6 ORF137052 - 0.083 13.4 0.0 0.12 12.8 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_4 PF13462.6 ORF137052 - 0.26 11.4 0.5 7 6.8 0.3 2.0 1 1 1 2 2 2 0 Thioredoxin UL17 PF17640.2 ORF136171 - 0.026 14.6 1.7 0.036 14.1 1.7 1.3 1 0 0 1 1 1 0 Uncharacterized UL17 DUF3399 PF11879.8 ORF135613 - 3.8 7.9 7.0 0.42 10.9 1.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3399) DNA_pol_phi PF04931.13 ORF135245 - 0.12 10.5 7.8 0.12 10.5 7.8 1.0 1 0 0 1 1 1 0 DNA polymerase phi Cwf_Cwc_15 PF04889.12 ORF135245 - 0.15 11.8 8.0 0.15 11.7 8.0 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DUF4820 PF16091.5 ORF135245 - 0.24 10.8 3.2 0.24 10.7 3.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) TAF1_subA PF14929.6 ORF135182 - 0.058 12.8 0.0 0.065 12.6 0.0 1.0 1 0 0 1 1 1 0 TAF RNA Polymerase I subunit A Thg1 PF04446.12 ORF135165 - 6.6e-32 110.2 0.2 7.3e-32 110.0 0.2 1.0 1 0 0 1 1 1 1 tRNAHis guanylyltransferase WBP-1 PF11669.8 ORF134257 - 0.1 13.2 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 DUF3346 PF11826.8 ORF132886 - 0.04 13.7 0.3 0.049 13.4 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3346) Tam41_Mmp37 PF09139.11 ORF132886 - 0.046 13.2 0.0 0.046 13.2 0.0 1.0 1 0 0 1 1 1 0 Phosphatidate cytidylyltransferase, mitochondrial Gemini_AC4_5_2 PF08464.10 ORF132112 - 0.077 12.9 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Geminivirus AC4/5 conserved region PRP38 PF03371.15 ORF130526 - 0.14 12.0 2.1 0.15 11.9 2.1 1.1 1 0 0 1 1 1 0 PRP38 family DUF5378 PF17349.2 ORF130173 - 0.6 9.4 5.0 0.38 10.0 2.6 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5378) Pox_A28 PF04584.14 ORF13015 - 0.15 12.3 0.2 0.21 11.8 0.2 1.3 1 0 0 1 1 1 0 Poxvirus A28 family Transformer PF06495.11 ORF13015 - 0.51 10.4 9.1 0.55 10.3 9.1 1.0 1 0 0 1 1 1 0 Fruit fly transformer protein Stap_Strp_toxin PF01123.20 ORF12950 - 0.091 13.6 0.1 3.4 8.6 0.1 2.2 1 1 0 1 1 1 0 Staphylococcal/Streptococcal toxin, OB-fold domain DUF4212 PF13937.6 ORF128832 - 0.21 12.0 2.7 0.35 11.3 2.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4212) DUF1189 PF06691.11 ORF128827 - 0.017 14.7 2.2 0.019 14.6 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) CxC4 PF18717.1 ORF128725 - 0.064 13.1 2.4 0.08 12.8 2.4 1.1 1 0 0 1 1 1 0 CxC4 like cysteine cluster associated with KDZ transposases LTP_2 PF14368.6 ORF128491 - 0.02 15.0 2.9 0.023 14.8 2.9 1.4 1 1 0 1 1 1 0 Probable lipid transfer GDC-P PF02347.16 ORF128160 - 0.043 12.7 0.2 0.043 12.6 0.2 1.0 1 0 0 1 1 1 0 Glycine cleavage system P-protein DUF5447 PF17525.2 ORF127160 - 0.16 12.5 4.3 0.46 11.0 3.3 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5447) COE1_HLH PF16423.5 ORF125732 - 0.0019 17.8 0.7 0.003 17.2 0.7 1.3 1 0 0 1 1 1 1 Transcription factor COE1 helix-loop-helix domain PhnH PF05845.12 ORF125489 - 0.024 14.4 0.0 0.03 14.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnH) IRK PF01007.20 ORF124494 - 0.049 13.5 3.7 0.058 13.2 3.7 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain Ntox28 PF15605.6 ORF124281 - 0.026 14.7 0.5 0.079 13.2 0.2 1.7 1 1 1 2 2 2 0 Bacterial toxin 28 CdiA_C PF18451.1 ORF124281 - 0.045 14.0 1.7 0.06 13.6 1.7 1.3 1 1 0 1 1 1 0 Contact-dependent growth inhibition CdiA C-terminal domain DUF2740 PF10872.8 ORF124087 - 0.17 11.8 1.0 0.26 11.2 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2740) Aminotran_1_2 PF00155.21 ORF124057 - 2.5e-12 46.7 0.1 2.7e-12 46.5 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Colipase_C PF02740.14 ORF123730 - 0.0042 17.2 4.2 0.09 13.0 0.2 2.3 2 0 0 2 2 2 2 Colipase, C-terminal domain EGF PF00008.27 ORF123730 - 0.088 13.1 1.6 0.088 13.1 1.6 2.4 2 0 0 2 2 2 0 EGF-like domain cEGF PF12662.7 ORF123730 - 0.12 12.4 0.6 0.12 12.4 0.6 2.5 2 0 0 2 2 2 0 Complement Clr-like EGF-like CCDC142 PF14923.6 ORF123669 - 0.017 13.9 1.6 0.019 13.7 1.6 1.0 1 0 0 1 1 1 0 Coiled-coil protein 142 LINES_C PF14695.6 ORF123669 - 0.017 14.5 0.3 0.027 13.9 0.3 1.3 1 0 0 1 1 1 0 Lines C-terminus Ldl_recept_a PF00057.18 ORF12174 - 0.092 13.0 1.8 0.11 12.8 0.6 1.7 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A CtIP_N PF10482.9 ORF121628 - 0.025 14.6 0.1 0.028 14.5 0.1 1.1 1 0 0 1 1 1 0 Tumour-suppressor protein CtIP N-terminal domain PLAC8 PF04749.17 ORF121281 - 0.0055 17.7 2.5 0.006 17.5 2.5 1.1 1 0 0 1 1 1 1 PLAC8 family MSSP PF03940.13 ORF121221 - 0.12 12.0 12.3 0.17 11.5 12.3 1.3 1 0 0 1 1 1 0 Male specific sperm protein WCCH PF03716.14 ORF120441 - 0.076 12.7 3.5 0.076 12.7 3.5 2.1 2 0 0 2 2 2 0 WCCH motif Adipogenin PF15202.6 ORF119953 - 0.065 13.3 0.5 2.1 8.4 0.4 2.1 1 1 1 2 2 2 0 Adipogenin Calcyon PF06387.11 ORF119594 - 0.14 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) IRK PF01007.20 ORF118946 - 0.049 13.5 3.7 0.058 13.2 3.7 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain DUF4395 PF14340.6 ORF118685 - 2.6 8.4 13.6 4.6 7.6 13.4 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4395) CCDC142 PF14923.6 ORF118340 - 0.06 12.1 0.0 0.065 12.0 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil protein 142 zf-HYPF PF07503.12 ORF118282 - 0.02 14.7 0.4 0.23 11.3 0.1 2.2 2 0 0 2 2 2 0 HypF finger Atrophin-1 PF03154.15 ORF116992 - 0.038 12.3 3.5 0.039 12.3 3.5 1.0 1 0 0 1 1 1 0 Atrophin-1 family Med20 PF08612.11 ORF116056 - 0.019 14.3 0.0 0.022 14.1 0.0 1.0 1 0 0 1 1 1 0 TATA-binding related factor (TRF) of subunit 20 of Mediator complex L_lactis_RepB_C PF06430.12 ORF115290 - 0.0036 17.3 0.3 0.0045 17.0 0.3 1.1 1 0 0 1 1 1 1 Lactococcus lactis RepB C-terminus ARGLU PF15346.6 ORF115290 - 0.0053 16.6 19.2 0.0086 16.0 19.2 1.3 1 1 0 1 1 1 1 Arginine and glutamate-rich 1 HSCB_C PF07743.13 ORF115290 - 0.33 11.5 7.4 0.41 11.2 7.4 1.3 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain CHAD PF05235.14 ORF115290 - 0.64 9.9 7.7 1.5 8.7 7.7 1.6 1 1 0 1 1 1 0 CHAD domain VIT1 PF01988.19 ORF115290 - 0.82 9.5 2.7 0.88 9.4 2.7 1.0 1 0 0 1 1 1 0 VIT family SPATA19 PF15212.6 ORF115161 - 0.15 12.3 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial DUF5475 PF17569.2 ORF113826 - 0.036 14.4 0.8 0.057 13.7 0.8 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5475) PigN PF04987.14 ORF113663 - 0.041 12.8 0.2 0.041 12.8 0.2 1.0 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) PUF PF00806.19 ORF113503 - 0.11 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat DUF1461 PF07314.11 ORF111958 - 0.11 12.4 3.4 0.12 12.2 3.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1461) AtpR PF12966.7 ORF1113 - 0.11 12.9 1.9 0.13 12.8 0.4 1.7 1 1 1 2 2 2 0 N-ATPase, AtpR subunit DUF4559 PF15112.6 ORF110691 - 1 9.0 5.0 1.1 8.8 5.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) DUF4522 PF15022.6 ORF108801 - 0.029 14.6 0.1 0.032 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) DUF3119 PF11317.8 ORF107640 - 0.0075 16.5 0.1 0.0075 16.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3119) SRAP PF02586.14 ORF107280 - 0.07 12.7 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 SOS response associated peptidase (SRAP) CyRPA PF18638.1 ORF107017 - 0.029 13.5 0.0 0.032 13.4 0.0 1.0 1 0 0 1 1 1 0 Cysteine-Rich Protective Antigen 6 bladed domain V1R PF03402.14 ORF107017 - 0.096 12.3 0.6 0.1 12.2 0.6 1.1 1 0 0 1 1 1 0 Vomeronasal organ pheromone receptor family, V1R PH PF00169.29 ORF10677 - 3.6e-05 24.2 0.0 4e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF10677 - 0.016 15.5 0.0 0.018 15.3 0.0 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain RRP14 PF15459.6 ORF105749 - 0.27 11.9 7.2 0.11 13.1 4.9 1.6 1 1 1 2 2 2 0 60S ribosome biogenesis protein Rrp14 DUF4871 PF16167.5 ORF105649 - 0.094 12.7 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) Membralin PF09746.9 ORF104109 - 0.00063 18.9 1.3 0.00068 18.8 1.3 1.1 1 0 0 1 1 1 1 Tumour-associated protein DUF4492 PF14899.6 ORF104109 - 0.19 11.7 4.8 0.18 11.8 1.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4492) DUF3810 PF12725.7 ORF104109 - 0.34 10.2 0.9 0.39 10.0 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF2207 PF09972.9 ORF104109 - 0.97 8.1 3.8 0.96 8.1 3.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ac110_PIF PF07280.11 ORF10327 - 0.0031 17.3 0.5 0.0031 17.3 0.5 1.8 1 1 1 2 2 2 1 Per os infectivity factor AC110 CCDC85 PF10226.9 ORF103032 - 0.0078 15.9 1.6 0.0086 15.8 1.6 1.1 1 0 0 1 1 1 1 CCDC85 family DUF1465 PF07323.12 ORF103032 - 0.021 14.7 1.6 0.024 14.5 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) SapB_1 PF05184.15 ORF103032 - 0.91 9.6 3.7 0.88 9.6 0.6 2.3 2 0 0 2 2 2 0 Saposin-like type B, region 1 Sex_peptide PF08138.11 ORF1030 - 0.0013 18.9 0.8 0.37 11.0 0.0 2.2 1 1 1 2 2 2 2 Sex peptide (SP) family Mtr2 PF10429.9 ORF102360 - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 Mtr2 PF10429.9 ORF102275 - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 DNAP_B_exo_N PF08452.10 ORF102134 - 0.11 11.9 0.1 0.22 10.9 0.1 1.4 1 0 0 1 1 1 0 DNA polymerase family B exonuclease domain, N-terminal Aminotran_1_2 PF00155.21 ORF101865 - 0.056 12.6 0.0 0.059 12.5 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II BALF1 PF06861.11 ORF101771 - 0.083 12.5 0.1 0.083 12.5 0.1 1.1 1 0 0 1 1 1 0 BALF1 protein DUF5554 PF17709.1 ORF101035 - 0.049 13.7 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5554) MraZ PF02381.18 NODE_65704_length_244_cov_0.765550_g57763_i0forward_frame_1 - 0.14 12.1 0.1 3.6 7.6 0.1 2.1 2 0 0 2 2 2 0 MraZ protein, putative antitoxin-like DUF2192 PF09958.9 NODE_65696_length_244_cov_1.076555_g57755_i0forward_frame_1 - 0.24 10.9 0.0 0.29 10.6 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2192) Filament_head PF04732.14 NODE_65690_length_244_cov_1.143541_g57749_i0reverse_frame_1 - 0.024 15.5 0.5 0.031 15.1 0.5 1.2 1 0 0 1 1 1 0 Intermediate filament head (DNA binding) region PNTB PF02233.16 NODE_65682_length_244_cov_1.229665_g57741_i0reverse_frame_1 - 0.11 11.3 3.8 0.11 11.4 3.8 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit VWD PF00094.25 NODE_65682_length_244_cov_1.229665_g57741_i0reverse_frame_1 - 0.15 12.3 0.1 0.18 12.0 0.1 1.1 1 0 0 1 1 1 0 von Willebrand factor type D domain Pam17 PF08566.10 NODE_65682_length_244_cov_1.229665_g57741_i0reverse_frame_1 - 0.7 9.7 2.5 0.84 9.5 2.5 1.1 1 0 0 1 1 1 0 Mitochondrial import protein Pam17 DUF4187 PF13821.6 NODE_65679_length_244_cov_1.311005_g57738_i0forward_frame_1 - 0.044 13.6 0.1 0.26 11.1 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4187) DUF4051 PF13260.6 NODE_65678_length_244_cov_1.325359_g57737_i0reverse_frame_1 - 0.29 10.9 3.0 0.55 10.0 3.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) GPI2 PF06432.11 NODE_65676_length_244_cov_1.330144_g57735_i0reverse_frame_1 - 0.068 12.6 0.2 0.066 12.7 0.2 1.1 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks325.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks325.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks325.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks325.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CTV_P6 PF06706.11 NODE_65675_length_244_cov_1.334928_g57734_i0reverse_frame_1 - 0.12 12.1 0.8 0.22 11.2 0.8 1.4 1 0 0 1 1 1 0 Citrus tristeza virus 6-kDa protein DUF1086 PF06461.11 NODE_65673_length_244_cov_1.368421_g57732_i0reverse_frame_1 - 0.17 11.7 0.0 0.36 10.7 0.0 1.4 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1086) Mito_fiss_Elm1 PF06258.11 NODE_65664_length_244_cov_1.492823_g57723_i0reverse_frame_1 - 0.079 12.1 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial fission ELM1 DUF3350 PF11830.8 NODE_65663_length_244_cov_1.511962_g57722_i0reverse_frame_1 - 0.042 14.2 0.0 0.061 13.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3350) RloB PF13707.6 NODE_65660_length_244_cov_1.521531_g57719_i0forward_frame_1 - 0.0051 17.0 0.7 0.0058 16.9 0.7 1.1 1 0 0 1 1 1 1 RloB-like protein MCR PF18509.1 NODE_65655_length_244_cov_1.545455_g57714_i0forward_frame_1 - 2.9 7.5 10.0 2.6 7.7 0.1 2.7 2 1 0 2 2 2 0 Magnetochrome domain Fip1 PF05182.13 NODE_65652_length_244_cov_1.583732_g57711_i0forward_frame_1 - 0.033 13.7 0.7 0.046 13.2 0.0 1.7 2 0 0 2 2 2 0 Fip1 motif HHA PF05321.11 NODE_65649_length_244_cov_1.622010_g57708_i0reverse_frame_1 - 2.6e-27 94.9 0.0 3.1e-27 94.6 0.0 1.1 1 0 0 1 1 1 1 Haemolysin expression modulating protein DUF1877 PF08974.10 NODE_65649_length_244_cov_1.622010_g57708_i0reverse_frame_1 - 0.13 12.3 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1877) DUF4761 PF15958.5 NODE_65631_length_244_cov_1.832536_g57690_i0reverse_frame_1 - 0.034 14.3 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4761) PHD_like PF12910.7 NODE_65623_length_244_cov_2.028708_g57682_i0forward_frame_1 - 0.035 14.1 0.0 0.039 14.0 0.0 1.1 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system UL17 PF17640.2 NODE_65619_length_244_cov_2.066986_g57678_i0reverse_frame_1 - 0.048 13.7 2.7 0.059 13.4 2.7 1.1 1 0 0 1 1 1 0 Uncharacterized UL17 DUF1310 PF07006.11 NODE_65609_length_244_cov_2.157895_g57668_i0reverse_frame_1 - 0.16 11.9 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1310) LRRCT PF01463.24 NODE_65598_length_244_cov_2.267943_g57657_i0forward_frame_1 - 0.043 14.4 0.1 0.14 12.7 0.1 1.9 1 0 0 1 1 1 0 Leucine rich repeat C-terminal domain zf_Rg PF17915.1 NODE_65595_length_244_cov_2.325359_g57654_i0reverse_frame_1 - 0.12 11.8 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Reverse gyrase zinc finger DUF1041 PF06292.17 NODE_65595_length_244_cov_2.325359_g57654_i0forward_frame_1 - 0.051 14.0 0.1 0.062 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1041) DUF4926 PF16277.5 NODE_65595_length_244_cov_2.325359_g57654_i0forward_frame_1 - 0.17 11.3 0.6 18 4.7 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4926) zf-RING_13 PF17977.1 NODE_65593_length_244_cov_2.344498_g57652_i0reverse_frame_1 - 0.021 14.9 0.2 0.033 14.3 0.2 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF4728 PF15860.5 NODE_65581_length_244_cov_2.545455_g57640_i0forward_frame_1 - 0.024 15.3 0.1 0.03 15.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4728) PAP2 PF01569.21 NODE_65580_length_244_cov_2.559809_g57639_i0forward_frame_1 - 0.0037 17.0 0.1 0.0044 16.8 0.1 1.1 1 0 0 1 1 1 1 PAP2 superfamily Baculo_PEP_N PF04512.12 NODE_65580_length_244_cov_2.559809_g57639_i0forward_frame_1 - 0.068 13.5 0.0 0.079 13.2 0.0 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, N terminus FeoB_associated PF12669.7 NODE_65580_length_244_cov_2.559809_g57639_i0forward_frame_1 - 0.078 13.4 0.2 0.46 10.9 0.0 2.0 1 1 1 2 2 2 0 FeoB-associated Cys-rich membrane protein SRP9-21 PF05486.12 NODE_65578_length_244_cov_2.598086_g57637_i0forward_frame_1 - 0.051 14.0 1.1 0.063 13.7 1.1 1.1 1 0 0 1 1 1 0 Signal recognition particle 9 kDa protein (SRP9) MFS_1 PF07690.16 NODE_65576_length_244_cov_2.612440_g57635_i0reverse_frame_1 - 0.00018 20.6 0.1 0.00019 20.5 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PTR2 PF00854.21 NODE_65576_length_244_cov_2.612440_g57635_i0reverse_frame_1 - 0.0025 16.7 0.6 0.0027 16.6 0.6 1.0 1 0 0 1 1 1 1 POT family PSK_trans_fac PF07704.11 NODE_65574_length_244_cov_2.636364_g57633_i0forward_frame_1 - 0.47 11.3 8.1 1.2 10.0 0.9 2.0 1 1 1 2 2 2 0 Rv0623-like transcription factor NAD_binding_7 PF13241.6 NODE_65571_length_244_cov_2.760766_g57630_i0forward_frame_1 - 0.0058 17.1 0.2 0.009 16.4 0.2 1.2 1 0 0 1 1 1 1 Putative NAD(P)-binding Pyr_redox_3 PF13738.6 NODE_65571_length_244_cov_2.760766_g57630_i0forward_frame_1 - 0.012 14.9 0.0 0.012 14.9 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 NODE_65571_length_244_cov_2.760766_g57630_i0forward_frame_1 - 0.047 12.9 0.0 0.047 12.9 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase UL2 PF08196.11 NODE_65570_length_244_cov_2.861244_g57629_i0reverse_frame_1 - 0.086 12.8 1.2 0.13 12.2 1.2 1.4 1 0 0 1 1 1 0 UL2 protein CorC_HlyC PF03471.17 NODE_65569_length_244_cov_2.889952_g57628_i0reverse_frame_1 - 7.5e-18 64.3 0.2 8.3e-18 64.2 0.2 1.0 1 0 0 1 1 1 1 Transporter associated domain SPRR2 PF14820.6 NODE_65566_length_244_cov_2.899522_g57625_i0reverse_frame_1 - 0.12 12.5 12.3 0.15 12.1 12.3 1.1 1 0 0 1 1 1 0 Small proline-rich 2 GP120 PF00516.18 NODE_65566_length_244_cov_2.899522_g57625_i0reverse_frame_1 - 0.48 9.0 5.5 0.51 8.9 5.5 1.1 1 0 0 1 1 1 0 Envelope glycoprotein GP120 ADH_zinc_N PF00107.26 NODE_65564_length_244_cov_3.047847_g57623_i0forward_frame_1 - 0.023 14.7 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 Zinc-binding dehydrogenase TerC PF03741.16 NODE_65564_length_244_cov_3.047847_g57623_i0forward_frame_1 - 0.098 12.3 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Integral membrane protein TerC family RFX5_DNA_bdg PF14621.6 NODE_65562_length_244_cov_3.325359_g57621_i0reverse_frame_1 - 0.15 11.8 1.6 0.16 11.7 1.6 1.1 1 0 0 1 1 1 0 RFX5 DNA-binding domain RVT_1 PF00078.27 NODE_65562_length_244_cov_3.325359_g57621_i0forward_frame_1 - 0.15 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) HTH_33 PF13592.6 NODE_65560_length_244_cov_3.583732_g57619_i0forward_frame_1 - 0.095 12.4 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix Spem1 PF15670.5 NODE_65542_length_244_cov_37.784689_g57601_i0reverse_frame_1 - 5 6.6 10.4 5.8 6.4 10.4 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 Herpes_UL32 PF06070.11 NODE_65542_length_244_cov_37.784689_g57601_i0reverse_frame_1 - 8.9 3.9 8.1 9.6 3.8 8.1 1.0 1 0 0 1 1 1 0 Herpesvirus large structural phosphoprotein UL32 Tmemb_161AB PF10268.9 NODE_65542_length_244_cov_37.784689_g57601_i0forward_frame_1 - 0.0032 16.2 0.8 0.0036 16.0 0.8 1.0 1 0 0 1 1 1 1 Predicted transmembrane protein 161AB GAGE PF05831.11 NODE_65532_length_244_cov_50.043062_g57591_i0reverse_frame_1 - 0.028 14.9 1.6 0.041 14.4 1.6 1.2 1 0 0 1 1 1 0 GAGE protein PDZ_3 PF17815.1 NODE_65532_length_244_cov_50.043062_g57591_i0forward_frame_1 - 0.0033 17.3 0.0 0.0042 16.9 0.0 1.2 1 0 0 1 1 1 1 PDZ domain TMEM192 PF14802.6 NODE_65529_length_244_cov_52.468900_g57588_i0forward_frame_1 - 0.12 11.4 0.4 0.14 11.2 0.4 1.0 1 0 0 1 1 1 0 TMEM192 family F-box-like PF12937.7 NODE_65527_length_244_cov_54.014354_g57586_i0forward_frame_1 - 0.0019 18.0 0.1 0.0027 17.5 0.1 1.3 1 0 0 1 1 1 1 F-box-like PPR PF01535.20 NODE_65525_length_244_cov_57.129187_g57584_i0forward_frame_1 - 0.072 13.4 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 PPR repeat SNF PF00209.18 NODE_65523_length_244_cov_62.909091_g57582_i0reverse_frame_1 - 0.44 9.2 2.4 0.46 9.1 2.4 1.0 1 0 0 1 1 1 0 Sodium:neurotransmitter symporter family Cylicin_N PF15241.6 NODE_65520_length_244_cov_67.622010_g57579_i0forward_frame_1 - 0.1 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Cylicin N-terminus Glyco_transf_56 PF07429.11 NODE_65519_length_244_cov_67.990431_g57578_i0reverse_frame_1 - 0.0047 16.1 0.1 0.0052 16.0 0.1 1.0 1 0 0 1 1 1 1 4-alpha-L-fucosyltransferase glycosyl transferase group 56 FTO_CTD PF12934.7 NODE_65514_length_244_cov_75.339713_g57573_i0reverse_frame_1 - 0.033 13.9 0.1 0.041 13.7 0.1 1.1 1 0 0 1 1 1 0 FTO C-terminal domain Ephrin_rec_like PF07699.13 NODE_65514_length_244_cov_75.339713_g57573_i0reverse_frame_1 - 0.086 12.6 0.3 0.15 11.9 0.0 1.6 2 0 0 2 2 2 0 Putative ephrin-receptor like DUF3899 PF13038.6 NODE_65513_length_244_cov_76.311005_g57572_i0forward_frame_1 - 0.012 16.1 0.6 0.016 15.7 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3899) SVM_signal PF12113.8 NODE_65513_length_244_cov_76.311005_g57572_i0forward_frame_1 - 0.032 14.1 2.5 0.054 13.4 2.5 1.4 1 0 0 1 1 1 0 SVM protein signal sequence Orf78 PF06024.12 NODE_65513_length_244_cov_76.311005_g57572_i0forward_frame_1 - 0.039 14.3 0.2 0.045 14.0 0.2 1.2 1 0 0 1 1 1 0 Orf78 (ac78) ERp29_N PF07912.13 NODE_65513_length_244_cov_76.311005_g57572_i0forward_frame_1 - 0.17 12.0 1.5 0.22 11.7 0.3 1.7 1 1 1 2 2 2 0 ERp29, N-terminal domain UL11 PF11094.8 NODE_65512_length_244_cov_77.373206_g57571_i0forward_frame_1 - 0.67 9.9 3.9 9.6 6.2 0.4 2.2 2 0 0 2 2 2 0 Membrane-associated tegument protein BIRC6 PF12356.8 NODE_65506_length_244_cov_109.598086_g57565_i0reverse_frame_1 - 0.14 11.6 0.2 0.16 11.4 0.2 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 DUF5083 PF16890.5 NODE_65504_length_244_cov_141.081340_g57563_i0reverse_frame_1 - 0.065 13.0 1.3 0.061 13.1 0.5 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF5083) EF-hand_7 PF13499.6 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 9.2e-07 29.2 0.1 1.2e-06 28.8 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 4.2e-06 25.9 0.5 0.00039 19.8 0.2 2.2 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 1.1e-05 25.2 0.2 1.6e-05 24.6 0.2 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 0.00018 21.2 0.2 0.0084 16.0 0.1 2.3 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 NODE_65504_length_244_cov_141.081340_g57563_i0forward_frame_1 - 0.027 14.0 0.1 0.027 14.0 0.1 1.9 2 0 0 2 2 2 0 EF hand Chromadorea_ALT PF05535.12 NODE_65499_length_244_cov_236.832536_g57558_i0forward_frame_1 - 0.23 11.7 4.2 0.38 11.0 4.1 1.5 1 1 0 1 1 1 0 Chromadorea ALT protein Thrombin_light PF09396.10 NODE_65495_length_244_cov_277.703349_g57554_i0forward_frame_1 - 0.061 13.1 0.1 0.09 12.5 0.1 1.3 1 0 0 1 1 1 0 Thrombin light chain p450 PF00067.22 NODE_65494_length_244_cov_845.904306_g57553_i0reverse_frame_1 - 4.6e-10 38.8 0.0 4.7e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Coa1 PF08695.10 NODE_65494_length_244_cov_845.904306_g57553_i0reverse_frame_1 - 0.094 12.5 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 zinc_ribbon_5 PF13719.6 NODE_65489_length_245_cov_0.800000_g57548_i0forward_frame_1 - 0.021 14.6 0.2 4.5 7.1 0.0 2.2 1 1 1 2 2 2 0 zinc-ribbon domain RELT PF12606.8 NODE_65484_length_245_cov_0.957143_g57543_i0forward_frame_1 - 1.3 8.1 4.3 0.24 10.4 0.6 1.6 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 PGA2 PF07543.12 NODE_65479_length_245_cov_1.138095_g57538_i0reverse_frame_1 - 0.011 15.7 7.6 0.014 15.4 7.6 1.0 1 0 0 1 1 1 0 Protein trafficking PGA2 AAR2 PF05282.11 NODE_65478_length_245_cov_1.138095_g57537_i0reverse_frame_1 - 0.0073 15.8 0.2 0.0081 15.6 0.2 1.0 1 0 0 1 1 1 1 AAR2 protein DUF3096 PF11295.8 NODE_65474_length_245_cov_1.171429_g57533_i0reverse_frame_1 - 0.34 10.6 7.1 0.93 9.2 4.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3096) DUF2706 PF10913.8 NODE_65471_length_245_cov_1.228571_g57530_i0forward_frame_1 - 0.075 12.9 0.1 0.11 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2706) DUF4884 PF16225.5 NODE_65466_length_245_cov_1.261905_g57525_i0forward_frame_1 - 0.19 11.8 1.7 0.3 11.2 1.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4884) Complex1_51K PF01512.17 NODE_65463_length_245_cov_1.285714_g57522_i0reverse_frame_1 - 1.1e-20 74.0 0.0 1.2e-20 73.9 0.0 1.0 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase 51 Kd subunit PPV_E1_C PF00519.17 NODE_65458_length_245_cov_1.323810_g57517_i0reverse_frame_1 - 0.0037 16.2 0.1 0.0041 16.0 0.1 1.0 1 0 0 1 1 1 1 Papillomavirus helicase MH2 PF03166.14 NODE_65457_length_245_cov_1.328571_g57516_i0forward_frame_1 - 0.014 15.7 0.1 0.016 15.5 0.1 1.1 1 0 0 1 1 1 0 MH2 domain CD20 PF04103.15 NODE_65456_length_245_cov_1.333333_g57515_i0forward_frame_1 - 0.017 15.2 1.4 0.022 14.9 1.4 1.1 1 0 0 1 1 1 0 CD20-like family Cyclin_C PF02984.19 NODE_65452_length_245_cov_1.380952_g57511_i0reverse_frame_1 - 0.025 14.6 0.2 0.04 14.0 0.2 1.4 1 1 0 1 1 1 0 Cyclin, C-terminal domain DUF4956 PF16316.5 NODE_65452_length_245_cov_1.380952_g57511_i0forward_frame_1 - 1.4 8.5 6.9 0.26 10.9 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4956) Kinesin PF00225.23 NODE_65451_length_245_cov_1.400000_g57510_i0reverse_frame_1 - 1.4e-17 63.7 0.1 1.4e-17 63.6 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_65451_length_245_cov_1.400000_g57510_i0reverse_frame_1 - 0.015 15.2 0.1 0.022 14.7 0.1 1.3 1 0 0 1 1 1 0 Microtubule binding PhnA_Zn_Ribbon PF08274.12 NODE_65447_length_245_cov_1.447619_g57506_i0reverse_frame_1 - 0.066 13.2 1.6 0.066 13.2 1.6 2.6 3 1 0 3 3 3 0 PhnA Zinc-Ribbon Pox_E10 PF04805.12 NODE_65441_length_245_cov_1.519048_g57500_i0forward_frame_1 - 0.041 13.7 0.5 0.066 13.1 0.5 1.4 1 0 0 1 1 1 0 E10-like protein conserved region Alpha_E1_glycop PF01589.16 NODE_65436_length_245_cov_1.552381_g57495_i0forward_frame_1 - 0.038 12.7 1.3 0.044 12.4 1.3 1.1 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein DUF1201 PF06716.11 NODE_65434_length_245_cov_1.580952_g57493_i0forward_frame_1 - 0.00018 21.5 0.3 0.0003 20.7 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1201) Peptidase_S49 PF01343.18 NODE_65429_length_245_cov_1.709524_g57488_i0forward_frame_1 - 4e-26 91.8 0.0 4.5e-26 91.6 0.0 1.0 1 0 0 1 1 1 1 Peptidase family S49 Tudor_2 PF18104.1 NODE_65429_length_245_cov_1.709524_g57488_i0forward_frame_1 - 0.095 12.4 0.1 8.1 6.2 0.0 2.3 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain Pkinase PF00069.25 NODE_65419_length_245_cov_1.828571_g57478_i0forward_frame_1 - 1.1e-16 61.0 0.0 1.2e-16 60.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_65419_length_245_cov_1.828571_g57478_i0forward_frame_1 - 3.6e-05 23.2 0.1 4.1e-05 23.0 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Colipase PF01114.18 NODE_65418_length_245_cov_1.833333_g57477_i0reverse_frame_1 - 1.9 8.2 9.7 4.3 7.1 9.7 1.6 1 0 0 1 1 1 0 Colipase, N-terminal domain Atypical_Card PF18461.1 NODE_65418_length_245_cov_1.833333_g57477_i0forward_frame_1 - 0.058 13.6 1.0 0.072 13.3 1.0 1.1 1 0 0 1 1 1 0 Atypical caspase recruitment domain DUF3583 PF12126.8 NODE_65418_length_245_cov_1.833333_g57477_i0forward_frame_1 - 0.13 11.7 1.2 0.14 11.6 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3583) JAKMIP_CC3 PF16034.5 NODE_65414_length_245_cov_1.890476_g57473_i0forward_frame_1 - 0.042 13.8 0.0 0.051 13.5 0.0 1.1 1 0 0 1 1 1 0 JAKMIP CC3 domain Deltaretro_Tax PF05599.11 NODE_65412_length_245_cov_1.900000_g57471_i0forward_frame_1 - 0.23 12.0 3.3 0.37 11.3 2.9 1.6 1 1 0 1 1 1 0 Deltaretrovirus Tax protein Rep_fac-A_C PF08646.10 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 3.9e-20 72.1 1.6 4e-20 72.0 1.6 1.0 1 0 0 1 1 1 1 Replication factor-A C terminal domain DUF3797 PF12677.7 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.011 15.6 0.1 0.018 14.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) PADR1 PF08063.12 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.02 14.7 3.0 0.048 13.4 3.0 1.6 1 0 0 1 1 1 0 PADR1 (NUC008) domain Ribosomal_L37ae PF01780.19 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.027 14.5 0.4 0.034 14.2 0.4 1.3 1 0 0 1 1 1 0 Ribosomal L37ae protein family TackOD1 PF18551.1 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.031 13.9 0.8 0.036 13.7 0.8 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 CDC24_OB3 PF17244.2 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.053 13.2 0.1 0.056 13.2 0.1 1.0 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 zinc-ribbons_6 PF07191.12 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.071 13.1 2.3 0.097 12.7 2.3 1.3 1 1 0 1 1 1 0 zinc-ribbons zf-TFIIB PF13453.6 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.085 12.2 0.8 0.15 11.4 0.8 1.4 1 0 0 1 1 1 0 Transcription factor zinc-finger CpXC PF14353.6 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.094 12.8 1.8 0.84 9.7 0.1 2.1 1 1 1 2 2 2 0 CpXC protein zf_UBZ PF18439.1 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.62 9.7 3.0 8.7 6.0 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-H2C2_2 PF13465.6 NODE_65406_length_245_cov_2.033333_g57465_i0forward_frame_1 - 0.64 10.5 4.1 7.9 7.1 0.2 2.6 3 0 0 3 3 3 0 Zinc-finger double domain SVA PF05326.11 NODE_65404_length_245_cov_2.104762_g57463_i0forward_frame_1 - 0.35 10.9 3.5 0.41 10.6 3.3 1.4 1 1 0 1 1 1 0 Seminal vesicle autoantigen (SVA) TMIE PF16038.5 NODE_65403_length_245_cov_2.128571_g57462_i0reverse_frame_1 - 1 9.3 5.2 0.42 10.5 2.9 1.6 1 1 1 2 2 2 0 TMIE protein DEAD PF00270.29 NODE_65400_length_245_cov_2.233333_g57459_i0reverse_frame_1 - 9.2e-17 61.4 0.0 1e-16 61.2 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 NODE_65400_length_245_cov_2.233333_g57459_i0reverse_frame_1 - 0.017 15.1 0.0 0.02 14.9 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit SecA_DEAD PF07517.14 NODE_65400_length_245_cov_2.233333_g57459_i0reverse_frame_1 - 0.28 10.5 0.1 0.33 10.2 0.1 1.1 1 0 0 1 1 1 0 SecA DEAD-like domain DUF4483 PF14825.6 NODE_65399_length_245_cov_2.285714_g57458_i0reverse_frame_1 - 0.017 14.9 0.0 0.02 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4483) DUF728 PF05304.12 NODE_65383_length_245_cov_2.661905_g57442_i0reverse_frame_1 - 0.039 13.8 2.1 0.045 13.6 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) DeoRC PF00455.22 NODE_65378_length_245_cov_2.876190_g57437_i0reverse_frame_1 - 3.5e-12 46.5 0.0 4.2e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 NODE_65378_length_245_cov_2.876190_g57437_i0reverse_frame_1 - 0.0059 16.3 0.1 0.0085 15.8 0.1 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain APOBEC3 PF18771.1 NODE_65375_length_245_cov_2.985714_g57434_i0forward_frame_1 - 0.25 11.4 0.2 0.34 11.0 0.2 1.1 1 0 0 1 1 1 0 APOBEC3 CAF1 PF04857.20 NODE_65372_length_245_cov_3.195238_g57431_i0forward_frame_1 - 0.11 11.7 0.5 0.12 11.6 0.5 1.0 1 0 0 1 1 1 0 CAF1 family ribonuclease RGP PF03214.13 NODE_65370_length_245_cov_3.533333_g57429_i0forward_frame_1 - 0.05 12.8 0.0 0.05 12.8 0.0 1.1 1 0 0 1 1 1 0 Reversibly glycosylated polypeptide cEGF PF12662.7 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.0075 16.2 24.0 0.047 13.6 3.2 3.8 3 2 0 3 3 3 2 Complement Clr-like EGF-like MSL2-CXC PF16682.5 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.0095 16.0 28.4 0.083 13.0 9.2 2.2 1 1 1 2 2 2 2 CXC domain of E3 ubiquitin-protein ligase MSL2 DUF4215 PF13948.6 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.055 13.9 9.7 0.055 13.9 9.7 3.5 2 2 1 3 3 3 0 Domain of unknown function (DUF4215) ANATO PF01821.18 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 0.059 14.2 11.3 1.5 9.8 0.4 3.8 3 2 0 3 3 3 0 Anaphylotoxin-like domain DUF1482 PF07358.11 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 2.5 8.1 9.3 5.2 7.0 1.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1482) PknG_rubred PF16919.5 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_1 - 9.3 6.4 11.3 4.7 7.4 2.1 2.1 1 1 1 2 2 2 0 Protein kinase G rubredoxin domain Staphopain_pro PF14731.6 NODE_65361_length_245_cov_18.028571_g57420_i0forward_frame_1 - 0.022 14.8 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 Staphopain proregion DUF3844 PF12955.7 NODE_65360_length_245_cov_23.238095_g57419_i0forward_frame_1 - 0.088 12.9 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) CfAFP PF05264.11 NODE_65358_length_245_cov_27.138095_g57417_i0forward_frame_1 - 0.071 13.1 0.8 0.17 11.9 0.8 1.6 1 1 0 1 1 1 0 Choristoneura fumiferana antifreeze protein (CfAFP) Nodulin_late PF07127.11 NODE_65353_length_245_cov_33.890476_g57412_i0reverse_frame_1 - 0.16 12.3 2.1 9.1 6.7 0.1 2.2 2 0 0 2 2 2 0 Late nodulin protein DPBB_1 PF03330.18 NODE_65349_length_245_cov_39.052381_g57408_i0reverse_frame_1 - 0.012 15.9 0.0 0.015 15.6 0.0 1.2 1 0 0 1 1 1 0 Lytic transglycolase Methyltransf_13 PF08421.11 NODE_65342_length_245_cov_46.304762_g57401_i0reverse_frame_1 - 0.034 14.4 0.0 0.052 13.8 0.0 1.4 1 0 0 1 1 1 0 Putative zinc binding domain DUF5403 PF17395.2 NODE_65341_length_245_cov_50.585714_g57400_i0reverse_frame_1 - 0.15 12.3 0.0 5.2 7.4 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5403) amfpi-1 PF12190.8 NODE_65339_length_245_cov_54.233333_g57398_i0forward_frame_1 - 0.041 14.5 0.2 0.045 14.4 0.2 1.1 1 0 0 1 1 1 0 Fungal protease inhibitor Shisa PF13908.6 NODE_65336_length_245_cov_56.885714_g57395_i0reverse_frame_1 - 0.079 13.2 0.3 0.086 13.1 0.3 1.0 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator IQ PF00612.27 NODE_65331_length_245_cov_61.780952_g57390_i0reverse_frame_1 - 0.00095 18.8 5.3 0.057 13.2 0.0 2.6 3 0 0 3 3 3 2 IQ calmodulin-binding motif DUF5097 PF17020.5 NODE_65331_length_245_cov_61.780952_g57390_i0reverse_frame_1 - 0.022 15.1 0.7 0.026 14.8 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5097) Spin-Ssty PF02513.17 NODE_65321_length_245_cov_83.323810_g57380_i0forward_frame_1 - 0.0088 15.7 0.2 1.2 9.0 0.0 2.2 2 0 0 2 2 2 2 Spin/Ssty Family HmuY PF14064.6 NODE_65320_length_245_cov_86.519048_g57379_i0forward_frame_1 - 0.063 13.5 0.0 0.075 13.3 0.0 1.1 1 0 0 1 1 1 0 HmuY protein zf-LITAF-like PF10601.9 NODE_65318_length_245_cov_98.985714_g57377_i0forward_frame_1 - 1 9.7 6.9 2 8.7 6.9 1.5 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain Tfb4 PF03850.14 NODE_65308_length_245_cov_190.495238_g57367_i0reverse_frame_1 - 0.044 13.3 0.1 0.044 13.3 0.1 1.0 1 0 0 1 1 1 0 Transcription factor Tfb4 SCIMP PF15050.6 NODE_65303_length_245_cov_2418.600000_g57362_i0reverse_frame_1 - 0.027 14.9 0.4 0.038 14.4 0.4 1.2 1 0 0 1 1 1 0 SCIMP protein DUF4440 PF14534.6 NODE_65296_length_246_cov_1.047393_g57355_i0forward_frame_1 - 0.012 16.0 0.0 0.013 15.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) mTERF PF02536.14 NODE_65296_length_246_cov_1.047393_g57355_i0forward_frame_1 - 0.017 14.1 0.0 0.017 14.0 0.0 1.0 1 0 0 1 1 1 0 mTERF DUF3109 PF11307.8 NODE_65288_length_246_cov_1.132701_g57347_i0reverse_frame_1 - 0.051 13.4 0.1 0.076 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3109) DUF1410 PF07198.11 NODE_65286_length_246_cov_1.137441_g57345_i0reverse_frame_1 - 0.28 11.7 1.5 24 5.5 0.2 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1410) DUF1461 PF07314.11 NODE_65279_length_246_cov_1.246445_g57338_i0forward_frame_1 - 0.037 14.0 1.2 0.042 13.8 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) DUF4658 PF15555.6 NODE_65269_length_246_cov_1.412322_g57328_i0forward_frame_1 - 0.07 13.3 1.4 0.095 12.8 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) FAM221 PF14753.6 NODE_65260_length_246_cov_1.516588_g57319_i0forward_frame_1 - 0.23 11.0 9.4 0.26 10.8 9.4 1.1 1 0 0 1 1 1 0 Protein FAM221A/B PH_RBD PF12068.8 NODE_65256_length_246_cov_1.549763_g57315_i0forward_frame_1 - 0.12 11.8 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 Rab-binding domain (RBD) WSC PF01822.19 NODE_65249_length_246_cov_1.592417_g57308_i0forward_frame_1 - 0.045 13.9 0.3 0.068 13.4 0.3 1.3 1 1 0 1 1 1 0 WSC domain 4HPAD_g_N PF18671.1 NODE_65242_length_246_cov_1.777251_g57301_i0reverse_frame_1 - 0.097 12.4 3.5 0.22 11.3 0.5 2.4 2 0 0 2 2 2 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal DUF1746 PF08508.10 NODE_65231_length_246_cov_1.914692_g57290_i0reverse_frame_1 - 0.021 15.2 1.3 0.023 15.1 1.3 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1746) zf-C5HC2 PF02928.16 NODE_65229_length_246_cov_1.933649_g57288_i0reverse_frame_1 - 7.1 7.1 12.0 2.7e+02 2.0 12.0 2.3 1 1 0 1 1 1 0 C5HC2 zinc finger EIAV_GP90 PF00971.18 NODE_65229_length_246_cov_1.933649_g57288_i0forward_frame_1 - 0.045 12.4 0.4 0.048 12.3 0.4 1.1 1 0 0 1 1 1 0 EIAV coat protein, gp90 MRP PF09387.10 NODE_65226_length_246_cov_1.981043_g57285_i0forward_frame_1 - 0.16 11.9 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial RNA binding protein MRP CobT PF06213.12 NODE_65225_length_246_cov_1.995261_g57284_i0reverse_frame_1 - 7.2 5.9 13.3 7.7 5.8 13.3 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT MgtE PF01769.16 NODE_65225_length_246_cov_1.995261_g57284_i0forward_frame_1 - 1.5 9.2 16.1 1.7 9.0 16.1 1.0 1 0 0 1 1 1 0 Divalent cation transporter MIX PF18529.1 NODE_65223_length_246_cov_2.004739_g57282_i0forward_frame_1 - 0.094 12.4 0.1 0.11 12.2 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins RIIa PF02197.17 NODE_65222_length_246_cov_2.014218_g57281_i0forward_frame_1 - 0.04 13.6 0.9 0.067 12.9 0.9 1.4 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit IL6Ra-bind PF09240.10 NODE_65221_length_246_cov_2.037915_g57280_i0forward_frame_1 - 0.039 14.4 0.0 0.042 14.3 0.0 1.1 1 0 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding Macin PF14865.6 NODE_65220_length_246_cov_2.042654_g57279_i0reverse_frame_1 - 0.21 12.2 3.5 0.31 11.6 3.5 1.4 1 0 0 1 1 1 0 Macin DUF1168 PF06658.12 NODE_65217_length_246_cov_2.080569_g57276_i0forward_frame_1 - 0.054 13.3 0.0 0.067 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) RVT_2 PF07727.14 NODE_65208_length_246_cov_2.284360_g57267_i0reverse_frame_1 - 8.1e-11 42.0 0.0 8.4e-11 42.0 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) TMEM71 PF15121.6 NODE_65205_length_246_cov_2.417062_g57264_i0forward_frame_1 - 0.15 11.7 0.2 0.17 11.5 0.2 1.2 1 0 0 1 1 1 0 TMEM71 protein family Lamprin PF06403.11 NODE_65202_length_246_cov_2.469194_g57261_i0forward_frame_1 - 0.044 13.7 0.9 0.06 13.3 0.9 1.2 1 0 0 1 1 1 0 Lamprin PGG PF13962.6 NODE_65193_length_246_cov_2.805687_g57252_i0forward_frame_1 - 0.36 10.7 4.0 0.45 10.4 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function ABC2_membrane_3 PF12698.7 NODE_65191_length_246_cov_2.848341_g57250_i0reverse_frame_1 - 0.099 11.7 4.6 0.11 11.6 4.6 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein RP-C_C PF11800.8 NODE_65191_length_246_cov_2.848341_g57250_i0reverse_frame_1 - 0.5 10.4 3.1 0.57 10.2 3.1 1.0 1 0 0 1 1 1 0 Replication protein C C-terminal region Orf78 PF06024.12 NODE_65191_length_246_cov_2.848341_g57250_i0reverse_frame_1 - 0.82 10.0 3.6 1.3 9.4 3.6 1.4 1 1 0 1 1 1 0 Orf78 (ac78) B277 PF17623.2 NODE_65191_length_246_cov_2.848341_g57250_i0forward_frame_1 - 3.3 6.7 7.8 3.9 6.5 7.8 1.3 1 1 0 1 1 1 0 Domain of unknown function TraV PF09676.10 NODE_65190_length_246_cov_2.886256_g57249_i0forward_frame_1 - 0.13 13.2 0.4 0.18 12.7 0.4 1.2 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) DnaJ PF00226.31 NODE_65182_length_246_cov_3.094787_g57241_i0forward_frame_1 - 2.9e-19 69.0 2.4 4.2e-19 68.4 2.4 1.3 1 0 0 1 1 1 1 DnaJ domain HALZ PF02183.18 NODE_65182_length_246_cov_3.094787_g57241_i0forward_frame_1 - 0.054 13.7 1.6 10 6.4 0.1 2.7 2 1 0 2 2 2 0 Homeobox associated leucine zipper PPO1_DWL PF12142.8 NODE_65182_length_246_cov_3.094787_g57241_i0forward_frame_1 - 0.065 13.0 0.3 0.13 12.1 0.2 1.5 2 0 0 2 2 2 0 Polyphenol oxidase middle domain CPP1-like PF11833.8 NODE_65182_length_246_cov_3.094787_g57241_i0forward_frame_1 - 0.27 10.9 0.6 0.3 10.7 0.6 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF4801 PF16059.5 NODE_65176_length_246_cov_6.056872_g57235_i0reverse_frame_1 - 0.028 14.4 3.7 1.6 8.8 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4801) DUF4547 PF15080.6 NODE_65176_length_246_cov_6.056872_g57235_i0forward_frame_1 - 0.017 14.8 0.3 2.6 7.6 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4547) DUF2157 PF09925.9 NODE_65169_length_246_cov_41.127962_g57228_i0reverse_frame_1 - 0.042 13.6 0.5 0.042 13.6 0.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) AraC_binding_2 PF14525.6 NODE_65166_length_246_cov_44.767773_g57225_i0forward_frame_1 - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 AraC-binding-like domain zf-UDP PF14569.6 NODE_65155_length_246_cov_59.023697_g57214_i0reverse_frame_1 - 0.23 11.6 2.2 0.16 12.1 0.8 1.6 1 1 0 1 1 1 0 Zinc-binding RING-finger Endonuclease_7 PF02945.15 NODE_65155_length_246_cov_59.023697_g57214_i0forward_frame_1 - 0.043 13.7 1.2 0.049 13.6 1.2 1.3 1 0 0 1 1 1 0 Recombination endonuclease VII Amnionless PF14828.6 NODE_65155_length_246_cov_59.023697_g57214_i0forward_frame_1 - 1.3 7.7 5.4 1.9 7.2 5.4 1.2 1 0 0 1 1 1 0 Amnionless VSP PF03302.13 NODE_65149_length_246_cov_66.118483_g57208_i0forward_frame_1 - 0.0004 19.4 1.9 0.00047 19.1 1.9 1.0 1 0 0 1 1 1 1 Giardia variant-specific surface protein N_Asn_amidohyd PF14736.6 NODE_65148_length_246_cov_67.943128_g57207_i0forward_frame_1 - 0.02 14.1 0.0 0.021 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein N-terminal asparagine amidohydrolase ISP1_C PF18161.1 NODE_65142_length_246_cov_75.251185_g57201_i0reverse_frame_1 - 0.033 14.2 0.3 0.039 13.9 0.3 1.1 1 0 0 1 1 1 0 ISP1 C-terminal zf-AN1 PF01428.16 NODE_65140_length_246_cov_79.232227_g57199_i0reverse_frame_1 - 1.3e-06 28.4 5.1 2e-06 27.9 5.1 1.3 1 0 0 1 1 1 1 AN1-like Zinc finger FAM27 PF15832.5 NODE_65136_length_246_cov_92.412322_g57195_i0forward_frame_1 - 1.5 9.4 5.9 0.78 10.3 0.2 2.0 1 1 1 2 2 2 0 FAM27 D and E protein family CoA_binding_3 PF13727.6 NODE_65132_length_246_cov_108.327014_g57191_i0forward_frame_1 - 0.51 10.3 5.4 0.59 10.1 5.4 1.0 1 0 0 1 1 1 0 CoA-binding domain LacY_symp PF01306.19 NODE_65130_length_246_cov_113.369668_g57189_i0forward_frame_1 - 0.31 9.8 1.3 0.33 9.7 1.3 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter DUF4636 PF15468.6 NODE_65128_length_246_cov_141.720379_g57187_i0reverse_frame_1 - 0.13 11.9 0.7 0.15 11.7 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) DUF3446 PF11928.8 NODE_65127_length_246_cov_147.649289_g57186_i0reverse_frame_1 - 0.44 10.9 15.6 0.6 10.4 15.6 1.3 1 0 0 1 1 1 0 Early growth response N-terminal domain SR-25 PF10500.9 NODE_65127_length_246_cov_147.649289_g57186_i0reverse_frame_1 - 9.7 5.7 25.0 11 5.5 25.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3951 PF13131.6 NODE_65126_length_246_cov_157.327014_g57185_i0forward_frame_1 - 0.18 12.1 3.1 0.32 11.2 3.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3951) DUF1211 PF06736.11 NODE_65124_length_246_cov_166.033175_g57183_i0forward_frame_1 - 0.047 14.1 1.0 0.052 14.0 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) DUF1593 PF07632.11 NODE_65119_length_246_cov_2563.758294_g57178_i0reverse_frame_1 - 0.031 13.7 0.0 0.037 13.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1593) Mem_trans PF03547.18 NODE_65117_length_246_cov_3702.625592_g57176_i0reverse_frame_1 - 0.00034 19.1 1.0 0.0004 18.9 1.0 1.1 1 0 0 1 1 1 1 Membrane transport protein DUF702 PF05142.12 NODE_65113_length_247_cov_0.834906_g57172_i0reverse_frame_2 - 0.07 13.6 1.1 2.5 8.6 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF702) Neisseria_TspB PF05616.13 NODE_65111_length_247_cov_0.891509_g57170_i0reverse_frame_2 - 2.4 6.5 3.2 2.7 6.4 3.2 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Peptidase_M14 PF00246.24 NODE_65110_length_247_cov_0.938679_g57169_i0reverse_frame_3 - 0.00058 19.7 0.0 0.00062 19.7 0.0 1.0 1 0 0 1 1 1 1 Zinc carboxypeptidase AstE_AspA PF04952.14 NODE_65110_length_247_cov_0.938679_g57169_i0reverse_frame_3 - 0.0043 16.2 0.0 0.005 16.0 0.0 1.1 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family zf-C5HC2 PF02928.16 NODE_65110_length_247_cov_0.938679_g57169_i0forward_frame_3 - 0.12 12.8 1.9 0.21 12.0 1.9 1.4 1 0 0 1 1 1 0 C5HC2 zinc finger TraS PF10624.9 NODE_65109_length_247_cov_0.938679_g57168_i0reverse_frame_3 - 0.065 13.2 0.0 0.067 13.1 0.0 1.2 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS HEPN_AbiA_CTD PF18732.1 NODE_65108_length_247_cov_0.938679_g57167_i0reverse_frame_3 - 0.0066 16.4 0.7 0.0077 16.2 0.7 1.1 1 0 0 1 1 1 1 HEPN like, Abia C-terminal domain Inhibitor_I36 PF03995.13 NODE_65108_length_247_cov_0.938679_g57167_i0reverse_frame_3 - 0.038 13.9 0.1 0.045 13.7 0.1 1.1 1 0 0 1 1 1 0 Peptidase inhibitor family I36 LPMO_10 PF03067.15 NODE_65106_length_247_cov_0.966981_g57165_i0reverse_frame_2 - 0.14 12.8 0.0 0.16 12.6 0.0 1.1 1 0 0 1 1 1 0 Lytic polysaccharide mono-oxygenase, cellulose-degrading DUF3915 PF13054.6 NODE_65103_length_247_cov_1.047170_g57162_i0forward_frame_3 - 0.071 13.1 1.1 0.08 12.9 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF3915 PF13054.6 NODE_65103_length_247_cov_1.047170_g57162_i0forward_frame_2 - 0.19 11.7 0.8 0.23 11.4 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) SCO1-SenC PF02630.14 NODE_65100_length_247_cov_1.108491_g57159_i0reverse_frame_2 - 0.19 11.7 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 SCO1/SenC Herpes_LAMP2 PF06126.11 NODE_65099_length_247_cov_1.113208_g57158_i0forward_frame_3 - 0.059 12.0 5.7 0.058 12.0 5.7 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 SNURF PF07192.11 NODE_65098_length_247_cov_1.117925_g57157_i0forward_frame_2 - 0.031 14.1 0.1 0.042 13.7 0.1 1.3 1 0 0 1 1 1 0 SNURF/RPN4 protein BRI3BP PF14965.6 NODE_65095_length_247_cov_1.127358_g57154_i0reverse_frame_3 - 0.064 12.8 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 HTH_36 PF13730.6 NODE_65089_length_247_cov_1.141509_g57148_i0reverse_frame_3 - 0.12 12.4 0.2 0.18 11.8 0.2 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain SelK_SelG PF10961.8 NODE_65088_length_247_cov_1.160377_g57147_i0forward_frame_3 - 0.35 11.5 2.5 0.39 11.4 2.5 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG TYA PF01021.19 NODE_65085_length_247_cov_1.165094_g57144_i0forward_frame_2 - 5.6 7.4 9.8 0.87 10.0 3.1 2.0 1 1 1 2 2 2 0 TYA transposon protein Tmp39 PF10271.9 NODE_65079_length_247_cov_1.316038_g57138_i0forward_frame_2 - 0.0079 15.2 2.0 0.0083 15.2 2.0 1.0 1 0 0 1 1 1 1 Putative transmembrane protein DNA_gyraseA_C PF03989.13 NODE_65073_length_247_cov_1.325472_g57132_i0reverse_frame_2 - 0.27 10.7 0.5 0.4 10.2 0.5 1.2 1 0 0 1 1 1 0 DNA gyrase C-terminal domain, beta-propeller DUF4734 PF15881.5 NODE_65072_length_247_cov_1.339623_g57131_i0reverse_frame_2 - 0.23 11.7 3.1 1.5 9.0 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4734) SK_channel PF03530.14 NODE_65071_length_247_cov_1.344340_g57130_i0reverse_frame_3 - 0.077 13.0 3.3 0.085 12.9 3.3 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel Ndc1_Nup PF09531.10 NODE_65067_length_247_cov_1.419811_g57126_i0forward_frame_3 - 0.13 10.9 0.2 0.14 10.8 0.2 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF2101 PF09874.9 NODE_65067_length_247_cov_1.419811_g57126_i0forward_frame_2 - 0.083 12.6 0.6 0.086 12.5 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) U79_P34 PF03064.16 NODE_65066_length_247_cov_1.443396_g57125_i0reverse_frame_3 - 0.054 12.9 10.6 0.062 12.7 10.6 1.1 1 0 0 1 1 1 0 HSV U79 / HCMV P34 BIRC6 PF12356.8 NODE_65066_length_247_cov_1.443396_g57125_i0reverse_frame_3 - 0.35 10.3 1.7 0.4 10.1 1.7 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks326.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks326.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks326.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks326.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ac81 PF05820.11 NODE_65066_length_247_cov_1.443396_g57125_i0forward_frame_3 - 0.96 9.0 5.1 1.1 8.8 5.1 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 GBV-C_env PF12786.7 NODE_65066_length_247_cov_1.443396_g57125_i0forward_frame_3 - 1.3 7.6 3.7 1.4 7.5 3.7 1.1 1 0 0 1 1 1 0 GB virus C genotype envelope MMPL PF03176.15 NODE_65066_length_247_cov_1.443396_g57125_i0forward_frame_3 - 5.3 5.9 8.3 6 5.7 8.3 1.0 1 0 0 1 1 1 0 MMPL family Acetyltransf_16 PF05301.11 NODE_65060_length_247_cov_1.504717_g57119_i0reverse_frame_3 - 0.034 13.9 0.0 0.044 13.5 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 Totivirus_coat PF05518.11 NODE_65059_length_247_cov_1.504717_g57118_i0reverse_frame_2 - 0.063 11.3 0.0 0.066 11.3 0.0 1.0 1 0 0 1 1 1 0 Totivirus coat protein MnhB PF04039.13 NODE_65058_length_247_cov_1.528302_g57117_i0forward_frame_3 - 0.15 12.4 0.1 0.16 12.3 0.1 1.1 1 0 0 1 1 1 0 Domain related to MnhB subunit of Na+/H+ antiporter S-layer PF07752.11 NODE_65057_length_247_cov_1.533019_g57116_i0reverse_frame_3 - 0.14 11.2 0.3 0.16 11.0 0.3 1.0 1 0 0 1 1 1 0 S-layer protein Abp2 PF09441.10 NODE_65057_length_247_cov_1.533019_g57116_i0forward_frame_3 - 0.13 12.4 0.1 0.15 12.1 0.1 1.0 1 0 0 1 1 1 0 ARS binding protein 2 DUF1980 PF09323.10 NODE_65057_length_247_cov_1.533019_g57116_i0forward_frame_2 - 0.13 12.2 0.1 0.15 11.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) rve PF00665.26 NODE_65053_length_247_cov_1.575472_g57112_i0reverse_frame_3 - 5.1e-08 33.1 0.0 6.5e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 NODE_65053_length_247_cov_1.575472_g57112_i0reverse_frame_3 - 0.00051 19.8 0.0 0.00071 19.3 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain DUF2198 PF09964.9 NODE_65052_length_247_cov_1.599057_g57111_i0reverse_frame_3 - 0.15 12.1 10.1 0.23 11.6 3.3 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2198) NB PF04159.13 NODE_65052_length_247_cov_1.599057_g57111_i0reverse_frame_3 - 9.1 6.4 8.5 15 5.7 1.7 2.6 1 1 2 3 3 3 0 NB glycoprotein Beta_helix PF13229.6 NODE_65052_length_247_cov_1.599057_g57111_i0reverse_frame_2 - 0.0061 16.4 2.0 0.0068 16.3 2.0 1.1 1 0 0 1 1 1 1 Right handed beta helix region ABC_tran PF00005.27 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 3.6e-16 59.9 0.0 3.8e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 ABC transporter MMR_HSR1 PF01926.23 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.011 15.8 0.0 0.012 15.7 0.0 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF87 PF01935.17 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.011 15.8 0.1 0.011 15.8 0.1 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_21 PF13304.6 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.014 15.2 0.0 0.016 15.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.029 14.1 0.1 0.043 13.6 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_15 PF13175.6 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.043 13.5 0.1 0.045 13.5 0.1 1.0 1 0 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.047 12.9 0.0 0.054 12.7 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain Gtr1_RagA PF04670.12 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.085 12.2 0.1 0.091 12.1 0.1 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region AAA_10 PF12846.7 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.089 11.7 0.0 0.089 11.7 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain DUF815 PF05673.13 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.14 11.3 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_16 PF13191.6 NODE_65048_length_247_cov_1.665094_g57107_i0reverse_frame_3 - 0.16 12.4 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Mating_N PF12731.7 NODE_65048_length_247_cov_1.665094_g57107_i0forward_frame_3 - 0.035 14.2 0.2 0.045 13.9 0.2 1.3 1 1 0 1 1 1 0 Mating-type protein beta 1 zf-RanBP PF00641.18 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 8.8e-06 24.9 4.4 8.8e-06 24.9 4.4 2.5 2 1 0 2 2 2 1 Zn-finger in Ran binding protein and others Desulfoferrod_N PF06397.12 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 0.0056 16.3 1.3 0.0056 16.3 1.3 2.2 2 1 0 2 2 2 1 Desulfoferrodoxin, N-terminal domain TackOD1 PF18551.1 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 0.0081 15.9 8.7 0.042 13.5 3.9 2.0 1 1 1 2 2 2 2 Thaumarchaeal output domain 1 zf-RING_10 PF16685.5 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 0.06 13.5 4.2 0.25 11.5 0.2 2.2 2 0 0 2 2 2 0 zinc RING finger of MSL2 DZR PF12773.7 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 0.27 11.3 10.6 0.81 9.8 1.4 2.4 1 1 1 2 2 2 0 Double zinc ribbon PHD_2 PF13831.6 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 0.3 10.7 0.3 0.3 10.7 0.3 3.1 4 0 0 4 4 4 0 PHD-finger zf-Sec23_Sec24 PF04810.15 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 1.2 9.3 21.0 5.1 7.2 6.0 3.7 2 1 1 3 3 3 0 Sec23/Sec24 zinc finger PHD PF00628.29 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 1.4 8.9 16.6 6.8 6.7 0.9 3.6 2 1 1 3 3 3 0 PHD-finger Prim_Zn_Ribbon PF08273.12 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 1.5 9.2 13.2 1 9.7 0.2 3.1 4 0 0 4 4 3 0 Zinc-binding domain of primase-helicase Zf_RING PF16744.5 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 2.2 8.4 12.0 0.64 10.2 1.8 2.6 2 1 0 2 2 2 0 KIAA1045 RING finger RecR PF02132.15 NODE_65043_length_247_cov_1.726415_g57102_i0reverse_frame_2 - 6.3 6.4 10.6 6.2 6.5 0.7 2.5 2 1 0 2 2 2 0 RecR protein Fer4_9 PF13187.6 NODE_65038_length_247_cov_1.792453_g57097_i0forward_frame_3 - 0.01 16.0 1.0 0.015 15.4 1.0 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain C_tripleX PF02363.19 NODE_65035_length_247_cov_1.806604_g57094_i0reverse_frame_2 - 0.055 13.8 1.9 0.055 13.8 1.9 2.0 2 0 0 2 2 2 0 Cysteine rich repeat zf-RING_14 PF17978.1 NODE_65031_length_247_cov_1.872642_g57090_i0forward_frame_3 - 0.13 12.7 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Peptidase_S31 PF05578.12 NODE_65030_length_247_cov_1.877358_g57089_i0forward_frame_2 - 0.059 12.9 0.6 0.063 12.8 0.6 1.1 1 0 0 1 1 1 0 Pestivirus NS3 polyprotein peptidase S31 Pkinase PF00069.25 NODE_65029_length_247_cov_1.882075_g57088_i0forward_frame_2 - 0.004 16.6 0.0 0.005 16.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain DUF3097 PF11296.8 NODE_65026_length_247_cov_1.910377_g57085_i0forward_frame_2 - 0.15 11.3 0.0 0.16 11.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3097) KxDL PF10241.9 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.00032 20.9 2.3 0.00035 20.8 2.3 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein Sec8_exocyst PF04048.14 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.003 17.5 0.8 0.0034 17.3 0.8 1.2 1 0 0 1 1 1 1 Sec8 exocyst complex component specific domain TACC_C PF05010.14 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.0038 17.0 3.2 0.0046 16.8 3.1 1.2 1 1 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal GAT PF03127.14 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.022 15.1 3.3 0.029 14.7 3.3 1.2 1 0 0 1 1 1 0 GAT domain PRKG1_interact PF15898.5 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.03 15.2 1.3 0.048 14.6 1.3 1.4 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Phage_Mu_Gam PF07352.12 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.049 13.5 2.6 0.074 13.0 2.6 1.2 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein THP2 PF09432.10 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.083 12.9 2.6 0.096 12.7 2.6 1.2 1 0 0 1 1 1 0 Tho complex subunit THP2 YabA PF06156.13 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.09 13.4 3.5 0.67 10.6 0.1 2.0 1 1 1 2 2 2 0 Initiation control protein YabA Mvb12 PF09452.10 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.13 12.7 3.0 8 7.0 1.6 2.6 1 1 1 2 2 2 0 ESCRT-I subunit Mvb12 TBCA PF02970.16 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.21 11.9 4.5 0.69 10.3 4.5 1.9 1 1 0 1 1 1 0 Tubulin binding cofactor A DUF4407 PF14362.6 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.26 10.6 3.7 0.28 10.5 3.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4094 PF13334.6 NODE_65025_length_247_cov_1.924528_g57084_i0reverse_frame_3 - 0.34 11.4 1.6 0.39 11.1 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) cNMP_binding PF00027.29 NODE_65021_length_247_cov_1.938679_g57080_i0reverse_frame_3 - 3.8e-09 36.5 0.0 4.3e-09 36.3 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain AC_N PF16214.5 NODE_65019_length_247_cov_1.948113_g57078_i0forward_frame_2 - 2.1 7.4 9.6 2.3 7.3 9.6 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF5013 PF16405.5 NODE_65016_length_247_cov_1.976415_g57075_i0forward_frame_3 - 0.048 13.9 0.3 0.056 13.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5013) Pex24p PF06398.11 NODE_65007_length_247_cov_2.193396_g57066_i0forward_frame_2 - 0.81 8.6 4.4 0.9 8.4 4.4 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin CDP-OH_P_transf PF01066.21 NODE_65003_length_247_cov_2.287736_g57062_i0forward_frame_3 - 0.0048 17.6 0.1 0.0076 17.0 0.1 1.4 1 0 0 1 1 1 1 CDP-alcohol phosphatidyltransferase TRF PF08558.10 NODE_65001_length_247_cov_2.311321_g57060_i0reverse_frame_3 - 0.032 13.8 1.3 0.037 13.6 1.3 1.0 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) E1_UFD PF09358.10 NODE_65001_length_247_cov_2.311321_g57060_i0forward_frame_3 - 0.0012 19.5 2.1 0.0014 19.2 2.1 1.1 1 0 0 1 1 1 1 Ubiquitin fold domain LANC_like PF05147.13 NODE_65001_length_247_cov_2.311321_g57060_i0forward_frame_3 - 0.093 11.3 0.2 0.11 11.1 0.2 1.1 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein Pkinase PF00069.25 NODE_65000_length_247_cov_2.320755_g57059_i0forward_frame_2 - 0.025 13.9 0.5 0.033 13.5 0.5 1.1 1 0 0 1 1 1 0 Protein kinase domain LRR19-TM PF15176.6 NODE_64999_length_247_cov_2.325472_g57058_i0reverse_frame_3 - 0.086 12.8 0.3 0.11 12.5 0.3 1.2 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain GCV_H PF01597.19 NODE_64998_length_247_cov_2.377358_g57057_i0reverse_frame_3 - 0.00042 20.2 0.1 0.00069 19.5 0.1 1.4 1 0 0 1 1 1 1 Glycine cleavage H-protein DUF2273 PF10031.9 NODE_64997_length_247_cov_2.382075_g57056_i0reverse_frame_3 - 0.38 10.8 5.4 8.5 6.5 0.2 2.4 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) DUF2603 PF10788.9 NODE_64995_length_247_cov_2.410377_g57054_i0reverse_frame_3 - 0.019 15.0 0.9 0.022 14.8 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2603) ER PF01133.17 NODE_64994_length_247_cov_2.424528_g57053_i0reverse_frame_3 - 4.6e-08 33.0 0.0 1.2e-07 31.7 0.0 1.6 2 0 0 2 2 2 1 Enhancer of rudimentary Microtub_bd PF16796.5 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 3.3e-06 27.1 0.3 3.3e-06 27.1 0.3 1.2 1 0 0 1 1 1 1 Microtubule binding Kinesin PF00225.23 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 3.8e-06 26.1 3.1 4.9e-06 25.7 3.1 1.4 1 1 0 1 1 1 1 Kinesin motor domain AAA_7 PF12775.7 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.0052 16.3 0.2 0.0063 16.0 0.2 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_24 PF13479.6 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.0066 16.2 0.1 0.0081 15.9 0.1 1.1 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.011 16.1 0.2 0.025 15.0 0.0 1.6 2 0 0 2 2 2 0 RNA helicase DUF87 PF01935.17 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.026 14.6 0.0 0.033 14.3 0.0 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain Zeta_toxin PF06414.12 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.028 13.7 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin TrwB_AAD_bind PF10412.9 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.064 12.2 0.1 0.075 11.9 0.1 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 NODE_64993_length_247_cov_2.429245_g57052_i0reverse_frame_2 - 0.13 12.6 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain Lamprin PF06403.11 NODE_64992_length_247_cov_2.466981_g57051_i0forward_frame_3 - 0.2 11.6 8.8 0.075 13.0 2.3 2.0 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_64992_length_247_cov_2.466981_g57051_i0forward_frame_2 - 6.9 6.6 9.9 2.9 7.9 1.4 2.1 1 1 1 2 2 2 0 Lamprin LisH_TPL PF17814.1 NODE_64991_length_247_cov_2.485849_g57050_i0reverse_frame_2 - 0.0087 15.7 0.2 0.016 14.9 0.2 1.4 1 0 0 1 1 1 1 LisH-like dimerisation domain Skp1 PF01466.19 NODE_64990_length_247_cov_2.547170_g57049_i0reverse_frame_2 - 0.12 12.5 1.5 0.19 11.9 0.5 2.0 1 1 1 2 2 2 0 Skp1 family, dimerisation domain DUF1199 PF06712.11 NODE_64989_length_247_cov_2.551887_g57048_i0reverse_frame_3 - 0.039 14.0 0.0 0.076 13.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1199) Papilloma_E5A PF05776.12 NODE_64988_length_247_cov_2.556604_g57047_i0reverse_frame_2 - 0.013 15.9 0.1 0.016 15.6 0.1 1.2 1 0 0 1 1 1 0 Papillomavirus E5A protein Endosulfine PF04667.17 NODE_64986_length_247_cov_2.636792_g57045_i0reverse_frame_3 - 0.11 12.6 0.3 0.2 11.8 0.3 1.4 1 0 0 1 1 1 0 cAMP-regulated phosphoprotein/endosulfine conserved region Defb50 PF17546.2 NODE_64986_length_247_cov_2.636792_g57045_i0reverse_frame_3 - 0.13 12.2 4.2 0.19 11.6 4.2 1.4 1 1 0 1 1 1 0 Beta defensin 50 eIF2A PF08662.11 NODE_64986_length_247_cov_2.636792_g57045_i0reverse_frame_2 - 7.2e-05 22.8 0.7 7.5e-05 22.7 0.7 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A ANAPC4_WD40 PF12894.7 NODE_64986_length_247_cov_2.636792_g57045_i0reverse_frame_2 - 0.0075 16.5 0.8 0.012 15.8 0.3 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 NODE_64986_length_247_cov_2.636792_g57045_i0reverse_frame_2 - 0.0079 17.0 0.1 0.099 13.6 0.0 2.0 2 0 0 2 2 2 1 WD domain, G-beta repeat CytB6-F_Fe-S PF08802.10 NODE_64983_length_247_cov_2.735849_g57042_i0reverse_frame_2 - 0.096 12.7 0.8 0.13 12.3 0.0 1.6 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit ZinT PF09223.11 NODE_64980_length_247_cov_2.820755_g57039_i0forward_frame_3 - 1.1e-31 110.1 2.3 1.2e-31 110.0 2.3 1.0 1 0 0 1 1 1 1 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ACOX PF01756.19 NODE_64979_length_247_cov_2.834906_g57038_i0reverse_frame_3 - 0.00063 19.3 0.1 0.00078 19.1 0.1 1.1 1 0 0 1 1 1 1 Acyl-CoA oxidase FoP_duplication PF13865.6 NODE_64974_length_247_cov_3.042453_g57033_i0reverse_frame_3 - 4.2 8.0 6.9 5.3 7.7 6.9 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 Ac76 PF05814.11 NODE_64966_length_247_cov_3.867925_g57025_i0reverse_frame_3 - 0.059 13.4 2.5 0.072 13.1 2.5 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) Ac81 PF05820.11 NODE_64966_length_247_cov_3.867925_g57025_i0reverse_frame_3 - 0.094 12.3 1.5 0.11 12.1 1.5 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 Ribosomal_L27e PF01777.18 NODE_64966_length_247_cov_3.867925_g57025_i0reverse_frame_2 - 0.037 14.4 0.6 0.056 13.8 0.4 1.4 1 1 0 1 1 1 0 Ribosomal L27e protein family OB_MalK PF17912.1 NODE_64965_length_247_cov_4.070755_g57024_i0reverse_frame_2 - 3.2e-08 34.3 0.1 6.3e-08 33.3 0.0 1.5 2 0 0 2 2 2 1 MalK OB fold domain TOBE_2 PF08402.10 NODE_64965_length_247_cov_4.070755_g57024_i0reverse_frame_2 - 0.0001 22.4 0.0 0.00014 21.9 0.0 1.3 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 NODE_64965_length_247_cov_4.070755_g57024_i0reverse_frame_2 - 0.00013 22.5 0.1 0.00026 21.5 0.0 1.5 2 0 0 2 2 2 1 CysA C-terminal regulatory domain DUF3924 PF13062.6 NODE_64962_length_247_cov_4.283019_g57021_i0reverse_frame_2 - 0.008 16.1 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3924) Phosducin PF02114.16 NODE_64962_length_247_cov_4.283019_g57021_i0reverse_frame_2 - 0.11 11.4 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 Phosducin CNOT11 PF10155.9 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_3 - 0.34 11.1 4.7 4.1 7.6 1.9 2.2 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 11 CNOT11 PF10155.9 NODE_64957_length_247_cov_5.632075_g57016_i0reverse_frame_2 - 0.76 9.9 8.5 2.3 8.4 1.4 2.4 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 11 DUF5092 PF17010.5 NODE_64955_length_247_cov_11.278302_g57014_i0reverse_frame_2 - 0.048 13.6 0.1 0.055 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5092) DnaB PF00772.21 NODE_64955_length_247_cov_11.278302_g57014_i0forward_frame_2 - 0.029 14.4 0.0 0.035 14.2 0.0 1.1 1 0 0 1 1 1 0 DnaB-like helicase N terminal domain BRX PF08381.11 NODE_64954_length_247_cov_18.382075_g57013_i0reverse_frame_2 - 0.13 11.6 1.2 2.7 7.4 1.2 2.0 1 1 1 2 2 2 0 Transcription factor regulating root and shoot growth via Pin3 HTH_23 PF13384.6 NODE_64950_length_247_cov_36.183962_g57009_i0reverse_frame_3 - 0.0096 15.7 0.1 0.038 13.8 0.0 1.9 2 0 0 2 2 2 1 Homeodomain-like domain Sec62 PF03839.16 NODE_64947_length_247_cov_40.584906_g57006_i0reverse_frame_2 - 1.5 8.3 5.0 1.7 8.1 5.0 1.2 1 0 0 1 1 1 0 Translocation protein Sec62 SURF4 PF02077.15 NODE_64941_length_247_cov_50.188679_g57000_i0reverse_frame_3 - 0.0067 16.0 0.4 0.0072 15.9 0.4 1.0 1 0 0 1 1 1 1 SURF4 family DUF1003 PF06210.11 NODE_64939_length_247_cov_52.033019_g56998_i0forward_frame_3 - 0.16 12.1 2.1 0.2 11.8 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1003) Phtf-FEM1B_bdg PF12129.8 NODE_64937_length_247_cov_53.698113_g56996_i0reverse_frame_3 - 0.054 13.3 0.2 0.064 13.1 0.2 1.2 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor CAP_N PF01213.19 NODE_64937_length_247_cov_53.698113_g56996_i0reverse_frame_2 - 0.55 9.7 4.7 0.58 9.6 4.7 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF5528 PF17666.1 NODE_64935_length_247_cov_56.221698_g56994_i0forward_frame_3 - 0.91 9.5 5.9 1.1 9.2 0.7 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5528) TRM13 PF05206.14 NODE_64933_length_247_cov_56.617925_g56992_i0reverse_frame_2 - 3.1e-09 36.8 0.0 3.8e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase TRM13 OAD_gamma PF04277.13 NODE_64929_length_247_cov_63.490566_g56988_i0reverse_frame_3 - 0.0096 16.5 1.0 0.0096 16.5 1.0 1.5 2 0 0 2 2 2 1 Oxaloacetate decarboxylase, gamma chain CopD PF05425.13 NODE_64929_length_247_cov_63.490566_g56988_i0reverse_frame_3 - 0.082 13.3 1.7 0.13 12.7 1.2 1.6 1 1 1 2 2 2 0 Copper resistance protein D RCC1_2 PF13540.6 NODE_64927_length_247_cov_64.358491_g56986_i0reverse_frame_3 - 1.5e-10 40.6 0.6 2.8e-10 39.7 0.6 1.4 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_64927_length_247_cov_64.358491_g56986_i0reverse_frame_3 - 0.019 15.6 0.6 1.7 9.3 0.0 2.3 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat DUF2805 PF10985.8 NODE_64924_length_247_cov_66.094340_g56983_i0reverse_frame_3 - 0.0028 18.0 0.3 0.0037 17.6 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2805) DIMCO_N PF16844.5 NODE_64924_length_247_cov_66.094340_g56983_i0reverse_frame_3 - 0.08 13.3 0.2 0.1 13.0 0.2 1.1 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor, N-terminal RELT PF12606.8 NODE_64924_length_247_cov_66.094340_g56983_i0reverse_frame_2 - 1.3 8.1 3.8 2.1 7.4 3.8 1.3 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 zf-C3HC4_3 PF13920.6 NODE_64923_length_247_cov_71.056604_g56982_i0reverse_frame_3 - 4.8 7.1 21.1 8.9 6.3 0.5 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Pertussis_S2S3 PF02918.15 NODE_64923_length_247_cov_71.056604_g56982_i0reverse_frame_2 - 0.1 12.5 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain TBD PF12845.7 NODE_64922_length_247_cov_72.542453_g56981_i0reverse_frame_3 - 0.16 11.9 0.1 0.22 11.4 0.1 1.2 1 0 0 1 1 1 0 TBD domain DUF1327 PF07041.11 NODE_64922_length_247_cov_72.542453_g56981_i0reverse_frame_2 - 0.044 13.8 0.0 0.051 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1327) Caskin-tail PF16632.5 NODE_64922_length_247_cov_72.542453_g56981_i0reverse_frame_2 - 0.14 12.5 1.2 0.53 10.7 1.2 1.8 1 1 0 1 1 1 0 C-terminal region of Caskin CBP4 PF07960.11 NODE_64917_length_247_cov_81.938679_g56976_i0reverse_frame_3 - 0.089 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 CBP4 tRNA-synt_1g PF09334.11 NODE_64917_length_247_cov_81.938679_g56976_i0reverse_frame_2 - 0.13 11.0 0.3 0.13 11.0 0.3 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (M) Imm57 PF15596.6 NODE_64917_length_247_cov_81.938679_g56976_i0forward_frame_2 - 0.071 13.5 0.0 0.087 13.2 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 57 DUF2859 PF11072.8 NODE_64914_length_247_cov_90.594340_g56973_i0forward_frame_2 - 0.1 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) SVA PF05326.11 NODE_64913_length_247_cov_93.665094_g56972_i0forward_frame_2 - 0.0014 18.6 0.5 0.0017 18.4 0.5 1.1 1 0 0 1 1 1 1 Seminal vesicle autoantigen (SVA) DUF2205 PF10224.9 NODE_64911_length_247_cov_125.386792_g56970_i0forward_frame_3 - 0.028 14.4 0.2 0.037 14.0 0.2 1.2 1 0 0 1 1 1 0 Short coiled-coil protein Nodulin_late PF07127.11 NODE_64911_length_247_cov_125.386792_g56970_i0forward_frame_2 - 0.0047 17.2 1.4 0.16 12.3 0.9 2.2 2 0 0 2 2 2 2 Late nodulin protein KNOX1 PF03790.13 NODE_64908_length_247_cov_134.792453_g56967_i0forward_frame_3 - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 KNOX1 domain DUF1590 PF07629.11 NODE_64905_length_247_cov_245.735849_g56964_i0forward_frame_2 - 0.081 12.7 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1590) CdhC PF03598.15 NODE_64905_length_247_cov_245.735849_g56964_i0forward_frame_2 - 0.2 11.5 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase complex beta subunit DUF3176 PF11374.8 NODE_64903_length_247_cov_653.905660_g56962_i0forward_frame_3 - 0.15 12.2 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3176) DUF5514 PF17633.2 NODE_64900_length_247_cov_50511.400943_g56959_i0forward_frame_3 - 0.016 15.5 0.0 0.018 15.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5514) PADR1 PF08063.12 NODE_64900_length_247_cov_50511.400943_g56959_i0forward_frame_2 - 0.056 13.2 0.7 0.056 13.2 0.7 2.2 1 1 2 3 3 3 0 PADR1 (NUC008) domain zf-C2HC5 PF06221.13 NODE_64900_length_247_cov_50511.400943_g56959_i0forward_frame_2 - 0.074 13.0 5.4 0.11 12.4 5.4 1.4 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type CoA_binding_2 PF13380.6 NODE_64899_length_248_cov_0.751174_g56958_i0forward_frame_2 - 0.099 13.1 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 CoA binding domain rpo30_N PF12410.8 NODE_64895_length_248_cov_0.934272_g56954_i0reverse_frame_2 - 0.0067 16.3 0.2 0.0075 16.2 0.2 1.2 1 0 0 1 1 1 1 Poxvirus DNA dependent RNA polymerase 30kDa subunit Glyco_hydro_28 PF00295.17 NODE_64888_length_248_cov_1.093897_g56947_i0forward_frame_3 - 0.0013 17.8 0.4 0.0015 17.7 0.4 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 BA14K PF07886.11 NODE_64886_length_248_cov_1.122066_g56945_i0forward_frame_2 - 0.037 13.9 0.2 0.037 13.9 0.2 1.9 2 0 0 2 2 2 0 BA14K-like protein Glu_synthase PF01645.17 NODE_64885_length_248_cov_1.126761_g56944_i0reverse_frame_2 - 0.23 10.5 0.0 0.27 10.3 0.0 1.0 1 0 0 1 1 1 0 Conserved region in glutamate synthase TMEM154 PF15102.6 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.0029 17.5 2.9 0.0029 17.5 2.9 1.1 1 0 0 1 1 1 1 TMEM154 protein family RIFIN PF02009.16 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.0088 16.0 3.5 0.0097 15.8 3.5 1.1 1 0 0 1 1 1 1 Rifin vMSA PF00695.19 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.019 14.1 0.8 0.021 13.9 0.8 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Shisa PF13908.6 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.032 14.5 0.4 0.033 14.4 0.4 1.0 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Orf78 PF06024.12 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.042 14.2 2.7 0.054 13.8 2.7 1.2 1 0 0 1 1 1 0 Orf78 (ac78) DUF2207 PF09972.9 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.11 11.3 1.0 0.096 11.4 1.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5383 PF17355.2 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.56 10.6 3.7 0.77 10.1 3.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Stevor PF17410.2 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.56 9.7 4.3 0.66 9.5 4.3 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame EssA PF10661.9 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 0.7 9.7 2.5 0.83 9.5 2.5 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA MMPL PF03176.15 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 1.1 8.2 7.4 1.3 7.9 7.4 1.1 1 0 0 1 1 1 0 MMPL family DUF3377 PF11857.8 NODE_64881_length_248_cov_1.136150_g56940_i0reverse_frame_3 - 3 7.8 14.8 9.5 6.2 14.9 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF3377) GP41 PF00517.17 NODE_64880_length_248_cov_1.164319_g56939_i0forward_frame_2 - 0.27 11.1 2.3 0.3 11.0 2.3 1.1 1 0 0 1 1 1 0 Retroviral envelope protein Antimicrobial12 PF08107.11 NODE_64878_length_248_cov_1.220657_g56937_i0reverse_frame_2 - 0.052 13.3 0.4 2.5 7.9 0.0 2.8 2 1 1 3 3 3 0 Pleurocidin family Kelch_5 PF13854.6 NODE_64876_length_248_cov_1.262911_g56935_i0forward_frame_2 - 4.1e-06 26.6 0.0 6.7e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 NODE_64876_length_248_cov_1.262911_g56935_i0forward_frame_2 - 0.00011 22.2 0.3 0.019 14.9 0.1 2.3 2 1 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_64876_length_248_cov_1.262911_g56935_i0forward_frame_2 - 0.001 19.3 1.4 0.0036 17.6 0.0 2.1 2 1 0 2 2 2 1 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_64876_length_248_cov_1.262911_g56935_i0forward_frame_2 - 0.0023 17.8 0.3 0.67 10.0 0.2 2.3 2 1 0 2 2 2 2 Kelch motif Microvir_J PF04726.13 NODE_64873_length_248_cov_1.291080_g56932_i0reverse_frame_2 - 4.4 7.4 7.1 1.4 8.9 0.2 2.5 3 0 0 3 3 3 0 Microvirus J protein AID PF18767.1 NODE_64872_length_248_cov_1.295775_g56931_i0forward_frame_2 - 0.016 15.2 0.7 0.021 14.8 0.7 1.3 1 0 0 1 1 1 0 Activation induced deaminase Filamin PF00630.19 NODE_64871_length_248_cov_1.305164_g56930_i0reverse_frame_3 - 0.00093 20.0 0.6 0.0011 19.7 0.6 1.1 1 0 0 1 1 1 1 Filamin/ABP280 repeat Invasin_D3 PF09134.10 NODE_64871_length_248_cov_1.305164_g56930_i0reverse_frame_3 - 0.017 15.4 0.1 0.059 13.7 0.1 1.7 1 1 0 1 1 1 0 Invasin, domain 3 DUF5530 PF17670.1 NODE_64870_length_248_cov_1.309859_g56929_i0reverse_frame_2 - 0.11 12.3 0.2 0.14 12.0 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5530) DASH_Dam1 PF08653.10 NODE_64867_length_248_cov_1.314554_g56926_i0reverse_frame_2 - 0.025 14.4 0.2 0.04 13.7 0.2 1.3 1 0 0 1 1 1 0 DASH complex subunit Dam1 Cortexin PF11057.8 NODE_64867_length_248_cov_1.314554_g56926_i0reverse_frame_2 - 0.18 11.7 1.3 0.24 11.3 1.3 1.2 1 0 0 1 1 1 0 Cortexin of kidney zf-CXXC PF02008.20 NODE_64867_length_248_cov_1.314554_g56926_i0forward_frame_3 - 0.053 13.5 8.9 0.12 12.5 3.5 2.3 2 0 0 2 2 2 0 CXXC zinc finger domain Wzy_C PF04932.15 NODE_64865_length_248_cov_1.333333_g56924_i0forward_frame_2 - 0.33 10.6 6.8 0.36 10.4 6.8 1.0 1 0 0 1 1 1 0 O-Antigen ligase AA_permease_C PF13906.6 NODE_64865_length_248_cov_1.333333_g56924_i0forward_frame_2 - 1.6 8.9 12.8 1.9 8.6 4.0 2.4 1 1 1 2 2 2 0 C-terminus of AA_permease DUF4501 PF14946.6 NODE_64864_length_248_cov_1.366197_g56923_i0reverse_frame_2 - 0.088 12.9 0.3 0.093 12.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Reprolysin_3 PF13582.6 NODE_64860_length_248_cov_1.427230_g56919_i0reverse_frame_3 - 0.045 14.3 0.0 0.058 13.9 0.0 1.1 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like ArsA_HSP20 PF17886.1 NODE_64847_length_248_cov_1.502347_g56906_i0reverse_frame_2 - 0.15 11.6 0.0 0.28 10.8 0.0 1.4 1 0 0 1 1 1 0 HSP20-like domain found in ArsA NPP PF08384.10 NODE_64846_length_248_cov_1.502347_g56905_i0reverse_frame_2 - 0.063 13.3 0.0 0.095 12.8 0.0 1.2 1 0 0 1 1 1 0 Pro-opiomelanocortin, N-terminal region MORN PF02493.20 NODE_64846_length_248_cov_1.502347_g56905_i0forward_frame_2 - 8.7e-13 47.3 5.0 2.2e-07 30.4 0.1 4.1 4 0 0 4 4 4 2 MORN repeat NEMP PF10225.9 NODE_64843_length_248_cov_1.563380_g56902_i0forward_frame_3 - 0.14 11.8 2.4 0.15 11.7 2.4 1.0 1 0 0 1 1 1 0 NEMP family Kelch_5 PF13854.6 NODE_64842_length_248_cov_1.572770_g56901_i0forward_frame_2 - 0.16 12.0 0.8 0.31 11.1 0.5 1.8 2 0 0 2 2 2 0 Kelch motif SBDS_C PF09377.10 NODE_64840_length_248_cov_1.605634_g56899_i0reverse_frame_3 - 0.31 11.0 2.0 0.49 10.4 2.0 1.4 1 1 0 1 1 1 0 SBDS protein C-terminal domain Drf_GBD PF06371.13 NODE_64840_length_248_cov_1.605634_g56899_i0reverse_frame_2 - 0.023 14.2 2.8 0.026 14.1 2.8 1.1 1 0 0 1 1 1 0 Diaphanous GTPase-binding Domain PAM2 PF07145.15 NODE_64837_length_248_cov_1.624413_g56896_i0reverse_frame_3 - 0.055 13.2 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 Ataxin-2 C-terminal region PI-PLC-X PF00388.19 NODE_64834_length_248_cov_1.647887_g56893_i0reverse_frame_3 - 0.13 11.8 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-specific phospholipase C, X domain Mito_carr PF00153.27 NODE_64832_length_248_cov_1.690141_g56891_i0reverse_frame_2 - 1e-18 67.0 0.0 1.1e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein DMT_YdcZ PF04657.13 NODE_64832_length_248_cov_1.690141_g56891_i0forward_frame_3 - 0.039 14.2 0.1 0.043 14.1 0.1 1.1 1 0 0 1 1 1 0 Putative inner membrane exporter, YdcZ DUF4364 PF14277.6 NODE_64831_length_248_cov_1.694836_g56890_i0reverse_frame_3 - 0.00019 21.2 0.4 0.0002 21.2 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Rep_1B PF17873.1 NODE_64830_length_248_cov_1.723005_g56889_i0reverse_frame_3 - 0.18 11.7 0.1 0.5 10.3 0.1 1.7 1 1 0 1 1 1 0 Replicase polyprotein 1ab INTAP PF16617.5 NODE_64825_length_248_cov_1.779343_g56884_i0reverse_frame_2 - 0.14 12.5 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region SNARE PF05739.19 NODE_64824_length_248_cov_1.779343_g56883_i0forward_frame_3 - 0.058 13.4 0.5 0.1 12.6 0.5 1.4 1 0 0 1 1 1 0 SNARE domain Exo_endo_phos_2 PF14529.6 NODE_64823_length_248_cov_1.788732_g56882_i0reverse_frame_3 - 0.011 15.6 0.5 0.018 14.9 0.5 1.5 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase RICH PF05062.12 NODE_64823_length_248_cov_1.788732_g56882_i0reverse_frame_3 - 0.018 15.4 1.0 0.028 14.8 1.0 1.3 1 0 0 1 1 1 0 RICH domain Secretin_N_2 PF07655.13 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_3 - 0.41 11.2 10.5 0.51 10.9 10.5 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain TERB2 PF15101.6 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 0.57 10.2 10.3 0.63 10.1 10.3 1.1 1 0 0 1 1 1 0 Telomere-associated protein TERB2 Spt20 PF12090.8 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 0.71 9.4 24.6 0.89 9.1 24.6 1.2 1 0 0 1 1 1 0 Spt20 family Pex14_N PF04695.13 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 1.1 10.0 12.2 1.2 9.7 12.2 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region TFIIA PF03153.13 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 1.3 9.0 23.5 1.4 8.9 23.5 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit eIF-3_zeta PF05091.12 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 1.4 7.8 11.2 1.4 7.8 11.2 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Presenilin PF01080.17 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 1.9 7.2 5.7 2.1 7.1 5.7 1.0 1 0 0 1 1 1 0 Presenilin Gastrin PF00918.17 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 2 9.4 9.3 2.1 9.3 9.3 1.1 1 0 0 1 1 1 0 Gastrin/cholecystokinin family DUF4834 PF16118.5 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 2.1 9.4 7.9 2.5 9.1 7.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Dicty_REP PF05086.12 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 2.4 6.0 6.8 2.6 5.9 6.8 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein DUF2890 PF11081.8 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 5.3 7.1 10.2 5.8 7.0 10.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) DUF2722 PF10846.8 NODE_64820_length_248_cov_1.812207_g56879_i0reverse_frame_2 - 9.3 5.1 20.3 11 4.9 20.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) Cortexin PF11057.8 NODE_64820_length_248_cov_1.812207_g56879_i0forward_frame_2 - 3.4 7.6 8.6 5.6 6.9 8.6 1.5 1 1 0 1 1 1 0 Cortexin of kidney Flavi_NS4B PF01349.17 NODE_64819_length_248_cov_1.816901_g56878_i0forward_frame_2 - 0.056 12.8 0.0 0.062 12.7 0.0 1.0 1 0 0 1 1 1 0 Flavivirus non-structural protein NS4B BH3 PF15285.6 NODE_64819_length_248_cov_1.816901_g56878_i0forward_frame_2 - 0.097 12.5 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 Beclin-1 BH3 domain, Bcl-2-interacting Pterin_bind PF00809.22 NODE_64818_length_248_cov_1.826291_g56877_i0reverse_frame_2 - 0.026 14.2 0.0 0.029 14.0 0.0 1.0 1 0 0 1 1 1 0 Pterin binding enzyme Zf_RING PF16744.5 NODE_64815_length_248_cov_1.849765_g56874_i0reverse_frame_3 - 0.087 13.0 9.9 0.11 12.7 9.9 1.2 1 0 0 1 1 1 0 KIAA1045 RING finger FBA_2 PF07735.17 NODE_64814_length_248_cov_1.859155_g56873_i0reverse_frame_2 - 0.055 13.6 0.6 0.068 13.3 0.6 1.2 1 0 0 1 1 1 0 F-box associated DUF4729 PF15866.5 NODE_64813_length_248_cov_1.887324_g56872_i0reverse_frame_2 - 0.016 14.5 0.4 0.016 14.5 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4729) Tcf25 PF04910.14 NODE_64811_length_248_cov_1.976526_g56870_i0reverse_frame_2 - 2e-15 56.7 0.1 2.3e-15 56.5 0.1 1.1 1 0 0 1 1 1 1 Transcriptional repressor TCF25 PMT_4TMC PF16192.5 NODE_64809_length_248_cov_2.014085_g56868_i0forward_frame_2 - 0.021 14.5 1.1 0.023 14.3 1.1 1.0 1 0 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase DUF4538 PF15061.6 NODE_64809_length_248_cov_2.014085_g56868_i0forward_frame_2 - 0.11 12.3 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) Cue1_U7BR PF18499.1 NODE_64800_length_248_cov_2.154930_g56859_i0reverse_frame_2 - 0.0041 17.1 0.0 0.0069 16.4 0.0 1.4 1 0 0 1 1 1 1 Ubc7p-binding region of Cue1 GCR1_C PF12550.8 NODE_64800_length_248_cov_2.154930_g56859_i0reverse_frame_2 - 0.1 13.0 0.1 0.13 12.6 0.1 1.2 1 0 0 1 1 1 0 Transcriptional activator of glycolytic enzymes GPHR_N PF12537.8 NODE_64800_length_248_cov_2.154930_g56859_i0forward_frame_3 - 0.018 15.1 0.0 0.03 14.4 0.0 1.4 1 0 0 1 1 1 0 The Golgi pH Regulator (GPHR) Family N-terminal Phosphorylase PF00343.20 NODE_64799_length_248_cov_2.154930_g56858_i0reverse_frame_3 - 4.1e-29 101.4 0.0 4.4e-29 101.3 0.0 1.0 1 0 0 1 1 1 1 Carbohydrate phosphorylase Ephrin_rec_like PF07699.13 NODE_64797_length_248_cov_2.187793_g56856_i0reverse_frame_3 - 0.0053 16.5 0.3 0.0072 16.1 0.3 1.2 1 0 0 1 1 1 1 Putative ephrin-receptor like HD_3 PF13023.6 NODE_64797_length_248_cov_2.187793_g56856_i0forward_frame_2 - 0.16 11.9 0.2 0.21 11.5 0.2 1.3 1 1 0 1 1 1 0 HD domain Gp49 PF05973.14 NODE_64796_length_248_cov_2.197183_g56855_i0forward_frame_2 - 0.061 13.5 0.1 0.072 13.2 0.1 1.2 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) PDZ_5 PF17817.1 NODE_64795_length_248_cov_2.201878_g56854_i0reverse_frame_3 - 0.14 12.5 0.1 0.19 12.0 0.1 1.2 1 0 0 1 1 1 0 PDZ domain Poxvirus PF06227.12 NODE_64794_length_248_cov_2.206573_g56853_i0forward_frame_3 - 0.16 11.7 5.4 0.19 11.5 5.4 1.2 1 0 0 1 1 1 0 dsDNA Poxvirus DPBB_1 PF03330.18 NODE_64790_length_248_cov_2.291080_g56849_i0forward_frame_3 - 0.18 12.1 0.0 0.22 11.8 0.0 1.2 1 0 0 1 1 1 0 Lytic transglycolase OTT_1508_deam PF14441.6 NODE_64789_length_248_cov_2.295775_g56848_i0reverse_frame_3 - 0.95 9.5 8.3 3.3 7.8 8.4 2.0 1 1 0 1 1 1 0 OTT_1508-like deaminase Acetyltransf_3 PF13302.7 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 1.1e-13 52.0 0.1 1.3e-13 51.8 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 1.7e-05 25.0 0.1 2e-05 24.8 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 0.00014 22.0 0.1 0.00015 21.9 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 0.00025 20.8 0.0 0.00028 20.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_64789_length_248_cov_2.295775_g56848_i0forward_frame_3 - 0.02 14.8 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 FR47-like protein DUF4385 PF14328.6 NODE_64788_length_248_cov_2.305164_g56847_i0reverse_frame_3 - 0.11 12.6 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4385) Coiled-coil_56 PF09813.9 NODE_64783_length_248_cov_2.413146_g56842_i0forward_frame_3 - 0.074 13.1 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 56 FAD-SLDH PF12318.8 NODE_64782_length_248_cov_2.413146_g56841_i0forward_frame_2 - 0.09 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase Hirudin PF00713.17 NODE_64779_length_248_cov_2.460094_g56838_i0forward_frame_2 - 1 9.7 5.5 1.5 9.2 5.5 1.2 1 0 0 1 1 1 0 Hirudin CsgF PF10614.9 NODE_64778_length_248_cov_2.460094_g56837_i0reverse_frame_3 - 3e-13 50.1 0.9 5e-13 49.4 0.9 1.3 1 0 0 1 1 1 1 Type VIII secretion system (T8SS), CsgF protein c-SKI_SMAD_bind PF08782.10 NODE_64778_length_248_cov_2.460094_g56837_i0forward_frame_3 - 0.031 14.5 0.0 0.041 14.1 0.0 1.2 1 0 0 1 1 1 0 c-SKI Smad4 binding domain Ion_trans PF00520.31 NODE_64775_length_248_cov_2.530516_g56834_i0reverse_frame_3 - 1.8e-05 24.1 5.8 2.1e-05 23.9 5.8 1.1 1 0 0 1 1 1 1 Ion transport protein Fer4_10 PF13237.6 NODE_64775_length_248_cov_2.530516_g56834_i0forward_frame_3 - 0.042 14.0 3.6 0.057 13.6 3.6 1.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Phage_Gp23 PF10669.9 NODE_64767_length_248_cov_2.821596_g56826_i0forward_frame_3 - 0.34 11.2 5.8 0.45 10.9 5.8 1.2 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) Med9 PF07544.13 NODE_64764_length_248_cov_2.896714_g56823_i0forward_frame_2 - 0.054 13.6 0.1 0.095 12.8 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Dpoe2NT PF12213.8 NODE_64761_length_248_cov_2.934272_g56820_i0reverse_frame_3 - 0.029 14.7 0.1 0.041 14.2 0.1 1.3 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal HTH_28 PF13518.6 NODE_64761_length_248_cov_2.934272_g56820_i0reverse_frame_2 - 0.043 14.0 1.2 0.043 14.0 1.2 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain DUF2990 PF11693.8 NODE_64760_length_248_cov_3.075117_g56819_i0reverse_frame_2 - 0.17 12.0 0.0 2.1 8.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2990) NPBW PF15180.6 NODE_64754_length_248_cov_3.253521_g56813_i0reverse_frame_3 - 0.02 14.7 0.1 0.022 14.6 0.1 1.2 1 0 0 1 1 1 0 Neuropeptides B and W ATP13 PF12921.7 NODE_64753_length_248_cov_3.267606_g56812_i0forward_frame_3 - 0.015 15.1 0.1 0.017 15.0 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ATPase expression TMEM169 PF15052.6 NODE_64753_length_248_cov_3.267606_g56812_i0forward_frame_3 - 0.018 15.2 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 TMEM169 protein family Nup88 PF10168.9 NODE_64753_length_248_cov_3.267606_g56812_i0forward_frame_3 - 0.07 10.9 0.2 0.073 10.9 0.2 1.0 1 0 0 1 1 1 0 Nuclear pore component zf-MYST PF17772.1 NODE_64753_length_248_cov_3.267606_g56812_i0forward_frame_2 - 0.028 14.0 0.0 0.055 13.1 0.0 1.5 1 0 0 1 1 1 0 MYST family zinc finger domain PsbK PF02533.15 NODE_64751_length_248_cov_3.370892_g56810_i0reverse_frame_3 - 0.26 11.5 1.1 0.36 11.0 1.1 1.1 1 0 0 1 1 1 0 Photosystem II 4 kDa reaction centre component Enterotoxin_HS1 PF08090.11 NODE_64750_length_248_cov_3.502347_g56809_i0reverse_frame_3 - 0.1 12.6 0.6 0.1 12.6 0.6 2.1 2 0 0 2 2 2 0 Heat stable E.coli enterotoxin 1 DUF2512 PF10710.9 NODE_64744_length_248_cov_18.943662_g56803_i0reverse_frame_3 - 0.039 13.6 3.0 0.18 11.4 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2512) MSA-2c PF12238.8 NODE_64743_length_248_cov_25.070423_g56802_i0reverse_frame_2 - 1.3 9.0 6.2 1.4 8.9 6.2 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c tRNA-synt_1_2 PF13603.6 NODE_64742_length_248_cov_26.089202_g56801_i0reverse_frame_3 - 0.056 12.9 0.9 0.065 12.7 0.9 1.1 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 XET_C PF06955.12 NODE_64742_length_248_cov_26.089202_g56801_i0reverse_frame_2 - 0.052 13.4 0.4 0.052 13.4 0.4 1.8 2 0 0 2 2 2 0 Xyloglucan endo-transglycosylase (XET) C-terminus DUF3671 PF12420.8 NODE_64742_length_248_cov_26.089202_g56801_i0forward_frame_2 - 0.014 15.5 2.5 0.018 15.1 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function DNA_mis_repair PF01119.19 NODE_64740_length_248_cov_30.732394_g56799_i0forward_frame_3 - 0.0034 17.1 0.3 0.0036 16.9 0.3 1.1 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks327.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks327.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks327.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks327.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:38 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Nif11 PF07862.11 NODE_64737_length_248_cov_37.591549_g56796_i0reverse_frame_2 - 0.021 15.1 4.5 0.7 10.2 4.5 2.1 1 1 0 1 1 1 0 Nif11 domain Ribosomal_L36e PF01158.18 NODE_64737_length_248_cov_37.591549_g56796_i0reverse_frame_2 - 0.03 14.5 1.9 0.04 14.2 1.9 1.2 1 0 0 1 1 1 0 Ribosomal protein L36e Vpu PF00558.19 NODE_64735_length_248_cov_39.417840_g56794_i0reverse_frame_3 - 0.0038 17.0 0.4 0.0059 16.3 0.4 1.4 1 0 0 1 1 1 1 Vpu protein YebO PF13974.6 NODE_64735_length_248_cov_39.417840_g56794_i0reverse_frame_3 - 0.034 14.2 0.1 0.039 14.0 0.1 1.2 1 0 0 1 1 1 0 YebO-like protein DUF2140 PF09911.9 NODE_64735_length_248_cov_39.417840_g56794_i0reverse_frame_3 - 0.048 13.2 0.1 0.049 13.2 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2140) DUF485 PF04341.12 NODE_64735_length_248_cov_39.417840_g56794_i0reverse_frame_3 - 0.12 12.3 0.4 0.26 11.3 0.4 1.6 1 1 0 1 1 1 0 Protein of unknown function, DUF485 MTHFR_C PF12225.8 NODE_64735_length_248_cov_39.417840_g56794_i0reverse_frame_2 - 0.029 14.0 4.3 0.029 14.0 4.3 1.1 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal D_CNTX PF17492.2 NODE_64733_length_248_cov_41.873239_g56792_i0reverse_frame_3 - 2.8 8.2 14.2 5 7.4 1.8 2.4 1 1 1 2 2 2 0 Delta Ctenitoxins CENP-M PF11111.8 NODE_64733_length_248_cov_41.873239_g56792_i0forward_frame_3 - 0.0032 16.7 0.1 0.004 16.4 0.1 1.1 1 0 0 1 1 1 1 Centromere protein M (CENP-M) Oxidored-like PF09791.9 NODE_64730_length_248_cov_45.981221_g56789_i0reverse_frame_2 - 0.011 15.4 0.5 0.016 14.9 0.5 1.3 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal TRAPPC9-Trs120 PF08626.11 NODE_64729_length_248_cov_46.746479_g56788_i0forward_frame_3 - 0.21 8.9 0.5 0.22 8.8 0.5 1.0 1 0 0 1 1 1 0 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit OrfB_IS605 PF01385.19 NODE_64725_length_248_cov_49.610329_g56784_i0reverse_frame_3 - 6.4 7.0 7.8 8.9 6.6 7.8 1.2 1 0 0 1 1 1 0 Probable transposase TIMELESS_C PF05029.13 NODE_64725_length_248_cov_49.610329_g56784_i0reverse_frame_2 - 0.14 11.3 6.7 0.14 11.2 6.7 1.0 1 0 0 1 1 1 0 Timeless protein C terminal region Chorion_2 PF03964.15 NODE_64725_length_248_cov_49.610329_g56784_i0forward_frame_3 - 0.11 13.3 6.1 0.14 13.0 6.1 1.2 1 0 0 1 1 1 0 Chorion family 2 AF-4 PF05110.13 NODE_64725_length_248_cov_49.610329_g56784_i0forward_frame_3 - 3.8 5.5 15.0 4 5.4 15.0 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF621 PF04789.15 NODE_64725_length_248_cov_49.610329_g56784_i0forward_frame_2 - 0.05 12.8 0.7 0.065 12.4 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF621) TMCO5 PF14992.6 NODE_64725_length_248_cov_49.610329_g56784_i0forward_frame_2 - 0.27 10.8 0.2 0.28 10.7 0.2 1.1 1 0 0 1 1 1 0 TMCO5 family DUF5079 PF16882.5 NODE_64722_length_248_cov_51.690141_g56781_i0forward_frame_2 - 0.093 12.6 2.7 0.11 12.4 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5079) PSI_integrin PF17205.3 NODE_64721_length_248_cov_52.422535_g56780_i0reverse_frame_2 - 0.35 10.6 9.1 0.77 9.5 9.1 1.6 1 1 0 1 1 1 0 Integrin plexin domain DnaJ PF00226.31 NODE_64719_length_248_cov_56.417840_g56778_i0reverse_frame_3 - 0.00063 19.8 0.1 0.001 19.2 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain DUF932 PF06067.11 NODE_64719_length_248_cov_56.417840_g56778_i0reverse_frame_3 - 0.00099 18.9 0.1 0.001 18.9 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF932) RCC1_2 PF13540.6 NODE_64718_length_248_cov_60.154930_g56777_i0reverse_frame_3 - 3.5e-17 61.7 6.0 4.9e-08 32.6 0.2 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 NODE_64718_length_248_cov_60.154930_g56777_i0reverse_frame_3 - 2.7e-07 31.1 11.0 0.067 13.8 0.3 3.2 2 1 1 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Kelch_5 PF13854.6 NODE_64718_length_248_cov_60.154930_g56777_i0reverse_frame_3 - 0.093 12.7 0.0 2.9 8.0 0.0 2.2 2 0 0 2 2 2 0 Kelch motif Kelch_6 PF13964.6 NODE_64718_length_248_cov_60.154930_g56777_i0reverse_frame_3 - 0.13 12.6 0.1 10 6.6 0.0 2.2 2 0 0 2 2 2 0 Kelch motif Tnp_22_trimer PF17489.2 NODE_64717_length_248_cov_61.201878_g56776_i0reverse_frame_3 - 0.12 12.4 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 L1 transposable element trimerization domain DUF5549 PF17703.1 NODE_64714_length_248_cov_64.478873_g56773_i0reverse_frame_3 - 0.23 11.1 4.0 0.26 10.9 4.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5549) DUF1431 PF07248.12 NODE_64713_length_248_cov_65.178404_g56772_i0reverse_frame_3 - 0.0027 18.0 2.7 0.0031 17.8 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1431) DUF5538 PF17692.1 NODE_64711_length_248_cov_66.915493_g56770_i0forward_frame_2 - 0.056 13.5 2.2 0.064 13.3 2.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) TIP49_C PF17856.1 NODE_64710_length_248_cov_69.248826_g56769_i0forward_frame_2 - 0.13 12.4 0.1 0.23 11.6 0.1 1.3 1 0 0 1 1 1 0 TIP49 AAA-lid domain PIP49_N PF14875.6 NODE_64709_length_248_cov_69.338028_g56768_i0reverse_frame_3 - 0.047 13.6 2.3 0.054 13.4 2.3 1.0 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 Glucan_synthase PF02364.15 NODE_64707_length_248_cov_70.920188_g56766_i0forward_frame_2 - 6.4 4.8 7.1 7.1 4.7 7.1 1.0 1 0 0 1 1 1 0 1,3-beta-glucan synthase component UBA PF00627.31 NODE_64706_length_248_cov_71.643192_g56765_i0reverse_frame_3 - 0.12 12.3 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 UBA/TS-N domain YfhO PF09586.10 NODE_64705_length_248_cov_73.300469_g56764_i0reverse_frame_3 - 7.2 4.7 7.7 8.6 4.4 7.7 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO FeoB_associated PF12669.7 NODE_64705_length_248_cov_73.300469_g56764_i0reverse_frame_2 - 0.075 13.4 2.2 2.7 8.5 0.0 2.2 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein FUSC_2 PF13515.6 NODE_64705_length_248_cov_73.300469_g56764_i0reverse_frame_2 - 0.11 12.6 2.2 0.15 12.2 2.2 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein-like zf-LITAF-like PF10601.9 NODE_64705_length_248_cov_73.300469_g56764_i0reverse_frame_2 - 0.73 10.1 6.0 8.6 6.7 6.0 2.2 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain SR-25 PF10500.9 NODE_64705_length_248_cov_73.300469_g56764_i0forward_frame_2 - 0.069 12.8 6.4 0.08 12.6 6.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Cluap1 PF10234.9 NODE_64702_length_248_cov_78.596244_g56761_i0forward_frame_2 - 1.6e-06 27.7 5.9 1.7e-06 27.6 5.9 1.0 1 0 0 1 1 1 1 Clusterin-associated protein-1 Utp21 PF04192.12 NODE_64702_length_248_cov_78.596244_g56761_i0forward_frame_2 - 0.0055 16.2 0.9 0.006 16.1 0.9 1.0 1 0 0 1 1 1 1 Utp21 specific WD40 associated putative domain L27_1 PF09058.10 NODE_64702_length_248_cov_78.596244_g56761_i0forward_frame_2 - 0.038 14.0 2.0 0.29 11.2 0.0 2.1 1 1 1 2 2 2 0 L27_1 P53 PF00870.18 NODE_64700_length_248_cov_80.873239_g56759_i0reverse_frame_3 - 0.2 11.4 3.7 0.23 11.2 3.7 1.1 1 0 0 1 1 1 0 P53 DNA-binding domain Peptidase_S66 PF02016.15 NODE_64698_length_248_cov_93.793427_g56757_i0reverse_frame_2 - 0.096 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 LD-carboxypeptidase N-terminal domain Ost5 PF05251.12 NODE_64696_length_248_cov_97.286385_g56755_i0reverse_frame_3 - 0.00011 22.4 2.1 0.00018 21.7 2.1 1.3 1 0 0 1 1 1 1 Oligosaccharyltransferase subunit 5 DUF962 PF06127.11 NODE_64695_length_248_cov_98.239437_g56754_i0reverse_frame_3 - 0.08 13.0 2.1 0.1 12.7 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DUF2368 PF10166.9 NODE_64694_length_248_cov_107.737089_g56753_i0reverse_frame_3 - 0.0058 16.3 0.5 0.0064 16.1 0.5 1.1 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2368) DnaB_2 PF07261.11 NODE_64690_length_248_cov_141.755869_g56749_i0reverse_frame_3 - 0.27 11.0 3.9 0.34 10.7 0.3 2.1 1 1 1 2 2 2 0 Replication initiation and membrane attachment MPC PF03650.13 NODE_64689_length_248_cov_142.187793_g56748_i0reverse_frame_3 - 0.035 14.2 0.1 0.045 13.9 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial pyruvate carriers LAM_C PF12544.8 NODE_64689_length_248_cov_142.187793_g56748_i0reverse_frame_2 - 0.24 11.6 0.1 0.26 11.4 0.1 1.1 1 0 0 1 1 1 0 Lysine-2,3-aminomutase DUF2101 PF09874.9 NODE_64687_length_248_cov_144.704225_g56746_i0reverse_frame_3 - 0.63 9.7 6.4 0.74 9.5 6.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Rota_NS6 PF04866.12 NODE_64681_length_248_cov_256.169014_g56740_i0reverse_frame_2 - 0.098 12.9 0.3 0.11 12.7 0.3 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 6 Terminase_3 PF04466.13 NODE_64681_length_248_cov_256.169014_g56740_i0reverse_frame_2 - 0.17 11.4 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Phage terminase large subunit Ribosomal_L39 PF00832.20 NODE_64677_length_248_cov_3128.361502_g56736_i0forward_frame_3 - 2.5e-16 59.0 14.2 3.1e-16 58.7 14.2 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein CxC6 PF18721.1 NODE_64677_length_248_cov_3128.361502_g56736_i0forward_frame_2 - 0.019 15.3 0.1 0.021 15.1 0.1 1.3 1 0 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases DUF2796 PF10986.8 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.0041 17.1 1.4 0.0046 16.9 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2796) DUF4746 PF15928.5 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.025 14.0 2.5 0.027 13.9 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) MAM33 PF02330.16 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.044 13.7 7.3 0.047 13.6 7.3 1.0 1 0 0 1 1 1 0 Mitochondrial glycoprotein Tim54 PF11711.8 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.048 12.4 1.0 0.05 12.4 1.0 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF3464 PF11947.8 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.14 11.9 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 DUF913 PF06025.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.35 9.8 4.2 0.38 9.7 4.2 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) ORC_WH_C PF18137.1 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.45 10.6 4.9 0.55 10.3 4.9 1.1 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal Afi1 PF07792.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.49 10.9 8.8 0.58 10.6 8.8 1.1 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking TRAP_alpha PF03896.16 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 0.78 8.9 12.2 0.87 8.7 12.2 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit SAPS PF04499.15 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 1.4 7.6 5.9 1.6 7.5 5.9 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein BSP_II PF05432.11 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 1.5 8.5 17.3 1.6 8.3 17.3 1.0 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) RPN2_C PF18004.1 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 1.7 8.5 7.4 1.9 8.4 7.4 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain TFB6 PF17110.5 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 1.9 8.2 13.2 2.3 7.9 13.2 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH RRN3 PF05327.11 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 2.3 6.7 15.3 2.4 6.6 15.3 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 GCIP PF13324.6 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 2.3 7.7 11.3 2.9 7.4 11.3 1.2 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting DUF2457 PF10446.9 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 2.5 7.2 31.5 2.7 7.0 31.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DNA_pol_phi PF04931.13 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 2.8 5.9 31.5 3 5.8 31.5 1.0 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 3 6.0 23.4 3.2 5.8 23.4 1.0 1 0 0 1 1 1 0 Nop14-like family Cytomega_UL84 PF06284.11 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 3 6.2 5.9 3.2 6.1 5.9 1.1 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Mpp10 PF04006.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 3.4 6.0 19.8 3.7 5.9 19.8 1.0 1 0 0 1 1 1 0 Mpp10 protein Cwf_Cwc_15 PF04889.12 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_3 - 6.9 6.3 27.2 8.9 6.0 27.2 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Mit_proteolip PF08039.11 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_2 - 0.13 12.7 0.1 0.17 12.3 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial proteolipid VESA1_N PF12785.7 NODE_64676_length_248_cov_3364.920188_g56735_i0reverse_frame_2 - 0.56 9.1 8.4 0.55 9.1 8.4 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Secretin_N_2 PF07655.13 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 0.015 15.8 12.3 0.017 15.7 12.3 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain CCDC24 PF15669.5 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 0.034 14.0 9.1 0.038 13.9 9.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family FliX PF10768.9 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 0.17 12.4 0.4 0.19 12.2 0.4 1.1 1 0 0 1 1 1 0 Class II flagellar assembly regulator Inp1 PF12634.7 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 0.28 11.2 4.3 0.36 10.9 4.3 1.2 1 0 0 1 1 1 0 Inheritance of peroxisomes protein 1 Macoilin PF09726.9 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 2.2 6.7 10.6 2.2 6.7 10.6 1.0 1 0 0 1 1 1 0 Macoilin family NAM-associated PF14303.6 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 2.4 8.9 5.2 2.8 8.6 5.2 1.1 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain SSP160 PF06933.11 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 4 5.5 17.7 3.9 5.6 17.7 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF4614 PF15391.6 NODE_64676_length_248_cov_3364.920188_g56735_i0forward_frame_2 - 7.5 6.5 15.7 9 6.3 15.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) DUF3482 PF11981.8 NODE_64673_length_248_cov_26020.586854_g56732_i0reverse_frame_3 - 0.0034 16.8 5.2 0.0034 16.8 5.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3482) DUF3482 PF11981.8 NODE_64672_length_248_cov_26228.990610_g56731_i0forward_frame_3 - 0.054 12.9 8.7 0.068 12.6 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) TetR_C_6 PF13977.6 NODE_64671_length_248_cov_72524.000000_g56730_i0reverse_frame_3 - 0.02 15.1 0.3 0.027 14.7 0.3 1.2 1 0 0 1 1 1 0 BetI-type transcriptional repressor, C-terminal ADD_DNMT3 PF17980.1 NODE_64670_length_249_cov_0.869159_g56729_i0forward_frame_2 - 0.048 13.7 0.3 0.079 13.0 0.3 1.4 1 0 0 1 1 1 0 Cysteine rich ADD domain in DNMT3 Tmemb_185A PF10269.9 NODE_64669_length_249_cov_0.934579_g56728_i0reverse_frame_3 - 0.00014 21.6 0.7 0.00017 21.4 0.7 1.1 1 0 0 1 1 1 1 Transmembrane Fragile-X-F protein Kinesin PF00225.23 NODE_64668_length_249_cov_0.934579_g56727_i0forward_frame_3 - 3.5e-08 32.7 0.6 3.9e-08 32.6 0.6 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_64668_length_249_cov_0.934579_g56727_i0forward_frame_3 - 0.00016 21.6 1.3 0.00019 21.4 1.3 1.0 1 0 0 1 1 1 1 Microtubule binding NID PF07292.13 NODE_64668_length_249_cov_0.934579_g56727_i0forward_frame_3 - 0.0094 16.6 0.4 0.013 16.1 0.2 1.3 1 1 0 1 1 1 1 Nmi/IFP 35 domain (NID) NIP_1 PF08995.10 NODE_64668_length_249_cov_0.934579_g56727_i0forward_frame_2 - 1.4 9.3 6.4 7.4 7.0 6.4 1.9 1 1 0 1 1 1 0 Necrosis inducing protein-1 Lamprin PF06403.11 NODE_64667_length_249_cov_1.046729_g56726_i0forward_frame_2 - 0.32 10.9 2.7 0.22 11.5 0.4 1.7 1 1 1 2 2 2 0 Lamprin CFC PF09443.10 NODE_64663_length_249_cov_1.116822_g56722_i0forward_frame_2 - 0.066 13.1 0.3 0.13 12.1 0.3 1.5 1 0 0 1 1 1 0 Cripto_Frl-1_Cryptic (CFC) DUF910 PF06014.11 NODE_64660_length_249_cov_1.121495_g56719_i0forward_frame_3 - 0.052 13.6 0.0 0.076 13.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF910) bVLRF1 PF18826.1 NODE_64660_length_249_cov_1.121495_g56719_i0forward_frame_2 - 0.14 12.0 0.2 0.18 11.7 0.2 1.1 1 0 0 1 1 1 0 bacteroidetes VLRF1 release factor DUF4791 PF16039.5 NODE_64659_length_249_cov_1.130841_g56718_i0reverse_frame_2 - 0.0087 15.6 0.1 0.0099 15.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4791) MOR2-PAG1_mid PF14228.6 NODE_64657_length_249_cov_1.224299_g56716_i0forward_frame_3 - 0.12 9.9 0.1 0.14 9.8 0.1 1.0 1 0 0 1 1 1 0 Cell morphogenesis central region BssB_TutG PF18512.1 NODE_64655_length_249_cov_1.308411_g56714_i0forward_frame_2 - 0.45 10.4 3.6 0.51 10.3 1.0 2.0 1 1 1 2 2 2 0 Benzylsuccinate synthase beta subunit Tyr_Deacylase PF02580.16 NODE_64654_length_249_cov_1.331776_g56713_i0forward_frame_2 - 0.065 13.8 0.0 0.072 13.6 0.0 1.1 1 0 0 1 1 1 0 D-Tyr-tRNA(Tyr) deacylase PI_PP_C PF18365.1 NODE_64651_length_249_cov_1.420561_g56710_i0forward_frame_3 - 0.035 14.1 0.2 0.041 13.9 0.2 1.2 1 0 0 1 1 1 0 Phosphoinositide phosphatase C-terminal domain Paramyxo_P_V_N PF13825.6 NODE_64650_length_249_cov_1.434579_g56709_i0reverse_frame_2 - 0.089 12.2 0.1 0.096 12.1 0.1 1.1 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus Got1 PF04178.12 NODE_64649_length_249_cov_1.457944_g56708_i0forward_frame_3 - 0.0074 16.7 4.5 0.011 16.1 4.5 1.2 1 0 0 1 1 1 1 Got1/Sft2-like family Prenyltrans PF00432.21 NODE_64648_length_249_cov_1.462617_g56707_i0forward_frame_3 - 0.068 12.9 0.2 0.11 12.2 0.2 1.3 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat Toxin_28 PF08115.11 NODE_64646_length_249_cov_1.471963_g56705_i0forward_frame_2 - 0.092 12.6 0.3 0.16 11.8 0.3 1.4 1 0 0 1 1 1 0 SFI toxin family zf-HC5HC2H_2 PF13832.6 NODE_64644_length_249_cov_1.471963_g56703_i0forward_frame_3 - 0.018 15.2 0.1 0.018 15.2 0.1 1.1 1 0 0 1 1 1 0 PHD-zinc-finger like domain MATalpha_HMGbox PF04769.12 NODE_64644_length_249_cov_1.471963_g56703_i0forward_frame_2 - 0.061 12.6 0.0 0.07 12.4 0.0 1.1 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box Pox_A21 PF05323.12 NODE_64642_length_249_cov_1.485981_g56701_i0reverse_frame_3 - 4.4 7.9 7.7 4.7 7.8 7.7 1.3 1 1 0 1 1 1 0 Poxvirus A21 Protein TBCA PF02970.16 NODE_64638_length_249_cov_1.495327_g56697_i0forward_frame_2 - 0.21 12.0 6.0 0.3 11.4 6.0 1.4 1 1 0 1 1 1 0 Tubulin binding cofactor A zf-C3HC4_3 PF13920.6 NODE_64637_length_249_cov_1.532710_g56696_i0reverse_frame_2 - 0.00062 19.6 1.4 0.00062 19.6 1.4 2.3 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_64637_length_249_cov_1.532710_g56696_i0reverse_frame_2 - 0.00071 19.7 7.3 0.0016 18.5 3.8 2.6 2 1 1 3 3 3 1 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 NODE_64637_length_249_cov_1.532710_g56696_i0reverse_frame_2 - 0.0026 17.6 6.6 0.0026 17.6 6.6 2.3 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_64637_length_249_cov_1.532710_g56696_i0reverse_frame_2 - 0.0034 17.4 4.2 0.0034 17.4 4.2 2.0 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_64637_length_249_cov_1.532710_g56696_i0reverse_frame_2 - 0.004 17.0 1.3 0.004 17.0 1.3 2.8 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_64637_length_249_cov_1.532710_g56696_i0reverse_frame_2 - 0.0079 16.5 6.2 0.17 12.2 5.5 2.4 1 1 0 1 1 1 1 Ring finger domain DHODB_Fe-S_bind PF10418.9 NODE_64637_length_249_cov_1.532710_g56696_i0reverse_frame_2 - 0.019 14.8 6.6 0.082 12.7 6.6 2.2 1 1 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B zf-RING_5 PF14634.6 NODE_64637_length_249_cov_1.532710_g56696_i0reverse_frame_2 - 0.96 9.5 9.7 0.45 10.5 6.6 2.2 2 1 0 2 2 2 0 zinc-RING finger domain PseudoU_synth_2 PF00849.22 NODE_64636_length_249_cov_1.537383_g56695_i0forward_frame_2 - 5e-11 42.9 0.0 5.6e-11 42.8 0.0 1.0 1 0 0 1 1 1 1 RNA pseudouridylate synthase Glyco_transf_8C PF08437.10 NODE_64635_length_249_cov_1.546729_g56694_i0forward_frame_3 - 0.19 11.8 2.5 0.31 11.1 2.5 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 8 C-terminal DUF5094 PF17015.5 NODE_64632_length_249_cov_1.602804_g56691_i0reverse_frame_2 - 0.059 13.5 0.6 0.071 13.2 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) DUF5383 PF17355.2 NODE_64631_length_249_cov_1.616822_g56690_i0forward_frame_2 - 0.032 14.6 2.0 0.036 14.4 2.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5383) zf-TAZ PF02135.16 NODE_64630_length_249_cov_1.626168_g56689_i0forward_frame_3 - 0.043 14.3 2.8 0.075 13.5 2.8 1.6 1 1 0 1 1 1 0 TAZ zinc finger TAP_C PF03943.13 NODE_64626_length_249_cov_1.668224_g56685_i0reverse_frame_2 - 0.12 12.0 0.3 0.19 11.4 0.3 1.3 1 0 0 1 1 1 0 TAP C-terminal domain Toxin_16 PF07945.11 NODE_64625_length_249_cov_1.668224_g56684_i0reverse_frame_3 - 0.07 13.0 3.6 0.14 12.1 3.6 1.5 1 0 0 1 1 1 0 Janus-atracotoxin zf-C2H2_4 PF13894.6 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.0022 18.7 0.6 0.0061 17.3 0.6 1.8 1 0 0 1 1 1 1 C2H2-type zinc finger zf-Di19 PF05605.12 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.0043 17.3 0.6 0.0074 16.6 0.6 1.4 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding Rhodanese_C PF12368.8 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.018 15.4 0.4 0.023 15.1 0.4 1.3 1 1 0 1 1 1 0 Rhodanase C-terminal zinc-ribbons_6 PF07191.12 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.026 14.5 2.4 0.037 14.0 2.4 1.5 1 1 0 1 1 1 0 zinc-ribbons SyrA PF11089.8 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.056 13.5 0.9 0.08 13.0 0.9 1.2 1 0 0 1 1 1 0 Exopolysaccharide production repressor DUF629 PF04780.12 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.066 11.7 0.5 0.1 11.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF629) zf-H2C2_2 PF13465.6 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.084 13.3 0.5 0.55 10.8 0.3 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_64624_length_249_cov_1.672897_g56683_i0reverse_frame_3 - 0.13 12.8 1.1 0.27 11.8 0.3 2.0 2 0 0 2 2 2 0 Zinc finger, C2H2 type SnoaL PF07366.12 NODE_64624_length_249_cov_1.672897_g56683_i0forward_frame_3 - 0.14 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase Staufen_C PF16482.5 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_3 - 0.034 14.3 1.0 0.042 14.0 1.0 1.2 1 0 0 1 1 1 0 Staufen C-terminal domain DUF4589 PF15252.6 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_2 - 0.013 15.5 4.5 0.014 15.4 4.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) Ten_N PF06484.12 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_2 - 0.099 12.5 2.5 0.12 12.3 2.5 1.0 1 0 0 1 1 1 0 Teneurin Intracellular Region CAP_N PF01213.19 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_2 - 0.21 11.1 2.3 0.22 11.0 2.3 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal CDC45 PF02724.14 NODE_64620_length_249_cov_1.733645_g56679_i0reverse_frame_2 - 0.58 8.4 2.0 0.6 8.3 2.0 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF3689 PF12463.8 NODE_64619_length_249_cov_1.747664_g56678_i0forward_frame_3 - 0.016 14.6 0.1 0.016 14.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3689) NB PF04159.13 NODE_64619_length_249_cov_1.747664_g56678_i0forward_frame_2 - 0.25 11.4 3.7 0.29 11.2 3.7 1.1 1 0 0 1 1 1 0 NB glycoprotein CoA_binding_3 PF13727.6 NODE_64618_length_249_cov_1.757009_g56677_i0forward_frame_3 - 6.8 6.7 8.3 8.1 6.4 8.3 1.1 1 0 0 1 1 1 0 CoA-binding domain Myb_DNA-binding PF00249.31 NODE_64613_length_249_cov_1.813084_g56672_i0reverse_frame_2 - 1.2e-12 47.8 4.0 7.5e-12 45.3 1.4 2.0 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_64613_length_249_cov_1.813084_g56672_i0reverse_frame_2 - 3.5e-10 40.0 2.5 2.7e-09 37.1 0.2 2.0 2 0 0 2 2 2 1 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 NODE_64613_length_249_cov_1.813084_g56672_i0reverse_frame_2 - 0.043 14.0 2.1 1.6 9.0 0.1 2.1 1 1 1 2 2 2 0 SANT/Myb-like domain of DAMP1 HTH_AsnC-type PF13404.6 NODE_64613_length_249_cov_1.813084_g56672_i0reverse_frame_2 - 0.078 12.8 0.1 0.59 10.0 0.0 2.0 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Myb_DNA-bind_5 PF13873.6 NODE_64613_length_249_cov_1.813084_g56672_i0reverse_frame_2 - 0.1 12.7 2.4 7.5 6.7 0.0 2.9 2 1 1 3 3 3 0 Myb/SANT-like DNA-binding domain TMEM251 PF15190.6 NODE_64613_length_249_cov_1.813084_g56672_i0forward_frame_2 - 0.0034 17.4 0.5 0.0037 17.2 0.5 1.1 1 0 0 1 1 1 1 Transmembrane protein 251 zf-C2H2_7 PF15269.6 NODE_64611_length_249_cov_1.827103_g56670_i0reverse_frame_2 - 0.11 12.6 2.7 0.16 12.1 2.7 1.4 1 0 0 1 1 1 0 Zinc-finger DUF2735 PF10931.8 NODE_64608_length_249_cov_1.850467_g56667_i0forward_frame_3 - 0.11 13.2 1.3 0.11 13.2 1.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2735) CCDC53 PF10152.9 NODE_64608_length_249_cov_1.850467_g56667_i0forward_frame_2 - 0.078 13.4 4.2 0.088 13.2 4.2 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex Transglut_prok PF09017.10 NODE_64608_length_249_cov_1.850467_g56667_i0forward_frame_2 - 1.4 8.2 4.0 1.6 8.0 4.0 1.0 1 0 0 1 1 1 0 Microbial transglutaminase FAP PF07174.11 NODE_64608_length_249_cov_1.850467_g56667_i0forward_frame_2 - 2.2 7.7 17.0 2.2 7.6 17.0 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Hydrolase PF00702.26 NODE_64605_length_249_cov_1.864486_g56664_i0reverse_frame_2 - 0.0075 16.6 0.2 0.0075 16.6 0.2 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase zf-HC5HC2H_2 PF13832.6 NODE_64600_length_249_cov_1.925234_g56659_i0reverse_frame_3 - 0.015 15.5 0.1 0.017 15.3 0.1 1.2 1 0 0 1 1 1 0 PHD-zinc-finger like domain LRR_6 PF13516.6 NODE_64599_length_249_cov_1.939252_g56658_i0reverse_frame_3 - 7.4e-05 22.5 0.0 7.4e-05 22.5 0.0 2.4 3 0 0 3 3 3 1 Leucine Rich repeat LRR_4 PF12799.7 NODE_64599_length_249_cov_1.939252_g56658_i0reverse_frame_3 - 0.16 12.5 0.2 0.16 12.5 0.2 2.6 2 1 0 2 2 2 0 Leucine Rich repeats (2 copies) DUF2989 PF11207.8 NODE_64597_length_249_cov_1.957944_g56656_i0forward_frame_2 - 0.071 12.9 0.1 0.079 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2989) Nrap_D6 PF17407.2 NODE_64595_length_249_cov_1.981308_g56654_i0forward_frame_2 - 0.092 13.0 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Nrap protein domain 6 ChaB PF06150.12 NODE_64593_length_249_cov_1.990654_g56652_i0reverse_frame_2 - 2.8e-24 85.5 2.6 3.4e-24 85.2 2.6 1.1 1 0 0 1 1 1 1 ChaB NTS PF15447.6 NODE_64593_length_249_cov_1.990654_g56652_i0reverse_frame_2 - 0.0073 16.8 0.1 0.014 15.9 0.1 1.4 1 0 0 1 1 1 1 N-terminal segments of PfEMP1 DUF1648 PF07853.11 NODE_64591_length_249_cov_2.023364_g56650_i0reverse_frame_2 - 0.089 12.5 0.2 0.13 11.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1648) EF-hand_1 PF00036.32 NODE_64588_length_249_cov_2.107477_g56647_i0forward_frame_2 - 0.016 14.7 0.0 0.088 12.4 0.0 2.1 2 0 0 2 2 2 0 EF hand EF-hand_6 PF13405.6 NODE_64588_length_249_cov_2.107477_g56647_i0forward_frame_2 - 0.016 15.1 0.0 0.49 10.5 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain EF-hand_7 PF13499.6 NODE_64588_length_249_cov_2.107477_g56647_i0forward_frame_2 - 0.021 15.3 0.1 4.6 7.8 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_8 PF13833.6 NODE_64588_length_249_cov_2.107477_g56647_i0forward_frame_2 - 0.032 14.1 0.2 1.3 9.0 0.0 2.7 3 0 0 3 3 3 0 EF-hand domain pair TPR_19 PF14559.6 NODE_64581_length_249_cov_2.186916_g56640_i0forward_frame_2 - 0.0057 17.1 0.6 0.0073 16.8 0.6 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat RPAP2_Rtr1 PF04181.13 NODE_64580_length_249_cov_2.196262_g56639_i0reverse_frame_2 - 0.095 13.0 0.3 0.095 13.0 0.3 1.5 2 0 0 2 2 2 0 Rtr1/RPAP2 family CEP63 PF17045.5 NODE_64577_length_249_cov_2.303738_g56636_i0forward_frame_2 - 0.0048 16.8 7.1 0.0054 16.7 7.1 1.1 1 0 0 1 1 1 1 Centrosomal protein of 63 kDa PI_PP_I PF18363.1 NODE_64577_length_249_cov_2.303738_g56636_i0forward_frame_2 - 0.076 13.2 2.3 0.29 11.4 2.3 1.8 1 1 0 1 1 1 0 Phosphoinositide phosphatase insertion domain Spc7 PF08317.11 NODE_64577_length_249_cov_2.303738_g56636_i0forward_frame_2 - 0.09 11.6 8.4 0.093 11.6 8.4 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein bZIP_1 PF00170.21 NODE_64577_length_249_cov_2.303738_g56636_i0forward_frame_2 - 0.38 10.9 7.3 0.1 12.7 4.5 1.6 2 0 0 2 2 2 0 bZIP transcription factor NblA PF04485.12 NODE_64575_length_249_cov_2.392523_g56634_i0forward_frame_2 - 0.038 14.4 0.1 0.058 13.8 0.1 1.3 1 0 0 1 1 1 0 Phycobilisome degradation protein nblA Fer4 PF00037.27 NODE_64575_length_249_cov_2.392523_g56634_i0forward_frame_2 - 0.22 11.4 2.6 0.36 10.7 2.6 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain SMN PF06003.12 NODE_64574_length_249_cov_2.392523_g56633_i0forward_frame_2 - 0.27 10.5 0.5 0.31 10.2 0.5 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) MdoG PF04349.12 NODE_64571_length_249_cov_2.560748_g56630_i0reverse_frame_2 - 1.2e-33 116.8 0.1 1.3e-33 116.7 0.1 1.0 1 0 0 1 1 1 1 Periplasmic glucan biosynthesis protein, MdoG HRM PF02793.22 NODE_64570_length_249_cov_2.584112_g56629_i0reverse_frame_3 - 0.059 13.7 0.5 0.082 13.2 0.5 1.3 1 0 0 1 1 1 0 Hormone receptor domain DUF4450 PF14614.6 NODE_64570_length_249_cov_2.584112_g56629_i0reverse_frame_3 - 0.1 12.2 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4450) TAT_signal PF10518.9 NODE_64570_length_249_cov_2.584112_g56629_i0forward_frame_3 - 0.13 12.1 0.2 0.13 12.1 0.2 2.3 2 1 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence Peptidase_U4 PF03419.13 NODE_64569_length_249_cov_2.588785_g56628_i0reverse_frame_3 - 0.0088 15.4 1.9 0.01 15.1 1.9 1.0 1 0 0 1 1 1 1 Sporulation factor SpoIIGA DUF2933 PF11666.8 NODE_64569_length_249_cov_2.588785_g56628_i0reverse_frame_3 - 0.026 14.5 1.4 0.026 14.5 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2933) Vsr PF03852.15 NODE_64567_length_249_cov_2.663551_g56626_i0reverse_frame_3 - 0.18 11.7 0.0 0.71 9.8 0.0 1.8 2 0 0 2 2 2 0 DNA mismatch endonuclease Vsr PDDEXK_5 PF11645.8 NODE_64563_length_249_cov_2.757009_g56622_i0reverse_frame_2 - 0.087 12.8 0.0 0.1 12.6 0.0 1.3 1 1 0 1 1 1 0 PD-(D/E)XK endonuclease Herpes_BBRF1 PF04793.12 NODE_64561_length_249_cov_2.873832_g56620_i0reverse_frame_2 - 0.17 10.9 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 BRRF1-like protein Pik1 PF11522.8 NODE_64560_length_249_cov_2.911215_g56619_i0reverse_frame_3 - 0.033 14.1 0.1 0.05 13.6 0.1 1.2 1 0 0 1 1 1 0 Yeast phosphatidylinositol-4-OH kinase Pik1 EzrA PF06160.12 NODE_64559_length_249_cov_2.967290_g56618_i0reverse_frame_2 - 0.0041 15.4 2.2 0.0043 15.3 2.2 1.0 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA Glyco_hydro81C PF17652.1 NODE_64559_length_249_cov_2.967290_g56618_i0reverse_frame_2 - 0.044 13.0 0.0 0.044 13.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 81 C-terminal domain SpoU_methylase PF00588.19 NODE_64558_length_249_cov_3.028037_g56617_i0reverse_frame_2 - 5.4e-11 42.8 0.0 6.7e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family zf-C3H1 PF10650.9 NODE_64558_length_249_cov_3.028037_g56617_i0reverse_frame_2 - 0.051 13.3 0.1 0.084 12.6 0.1 1.4 1 0 0 1 1 1 0 Putative zinc-finger domain TM231 PF10149.9 NODE_64553_length_249_cov_3.434579_g56612_i0reverse_frame_2 - 5.2e-13 49.0 0.3 5.5e-13 48.9 0.3 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 DUF222 PF02720.17 NODE_64552_length_249_cov_3.855140_g56611_i0reverse_frame_2 - 0.04 13.4 0.0 0.043 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF222) Lyase_catalyt PF09093.11 NODE_64552_length_249_cov_3.855140_g56611_i0forward_frame_3 - 0.049 12.8 0.1 0.059 12.5 0.1 1.1 1 0 0 1 1 1 0 Lyase, catalytic Pepsin-I3 PF06394.13 NODE_64551_length_249_cov_4.093458_g56610_i0reverse_frame_3 - 0.094 12.9 0.9 0.14 12.4 0.9 1.2 1 0 0 1 1 1 0 Pepsin inhibitor-3-like repeated domain DUF3822 PF12864.7 NODE_64549_length_249_cov_7.957944_g56608_i0forward_frame_2 - 0.0074 15.5 1.2 0.0077 15.4 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3822) DBD_Tnp_Hermes PF10683.9 NODE_64545_length_249_cov_21.757009_g56604_i0forward_frame_3 - 0.094 12.4 0.3 0.15 11.8 0.3 1.4 1 0 0 1 1 1 0 Hermes transposase DNA-binding domain Imm45 PF15572.6 NODE_64545_length_249_cov_21.757009_g56604_i0forward_frame_3 - 0.13 12.6 0.1 0.22 11.9 0.1 1.4 1 0 0 1 1 1 0 Immunity protein 45 PEX11 PF05648.14 NODE_64545_length_249_cov_21.757009_g56604_i0forward_frame_3 - 0.43 10.0 2.4 0.48 9.9 2.4 1.1 1 0 0 1 1 1 0 Peroxisomal biogenesis factor 11 (PEX11) EB1 PF03271.17 NODE_64543_length_249_cov_24.714953_g56602_i0forward_frame_2 - 0.038 14.2 0.2 0.057 13.7 0.2 1.3 1 0 0 1 1 1 0 EB1-like C-terminal motif Tower PF09121.10 NODE_64542_length_249_cov_24.985981_g56601_i0reverse_frame_3 - 0.27 11.4 2.7 0.32 11.2 0.4 2.0 2 0 0 2 2 2 0 Tower Adhesin_Dr PF04619.12 NODE_64542_length_249_cov_24.985981_g56601_i0reverse_frame_2 - 0.038 13.9 0.1 0.045 13.7 0.1 1.0 1 0 0 1 1 1 0 Dr-family adhesin Tmemb_161AB PF10268.9 NODE_64538_length_249_cov_36.897196_g56597_i0reverse_frame_3 - 0.02 13.6 1.1 0.023 13.4 1.1 1.1 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB Oleosin PF01277.17 NODE_64538_length_249_cov_36.897196_g56597_i0forward_frame_3 - 0.51 10.1 0.8 0.92 9.3 0.1 1.6 1 1 1 2 2 2 0 Oleosin Fucose_iso_N2 PF07882.12 NODE_64538_length_249_cov_36.897196_g56597_i0forward_frame_3 - 8 6.0 7.5 35 3.9 7.5 1.9 1 1 0 1 1 1 0 L-fucose isomerase, second N-terminal domain Zn-ribbon_8 PF09723.10 NODE_64535_length_249_cov_40.158879_g56594_i0forward_frame_2 - 0.063 13.4 1.6 0.12 12.6 1.6 1.5 1 0 0 1 1 1 0 Zinc ribbon domain OPT PF03169.15 NODE_64532_length_249_cov_41.196262_g56591_i0forward_frame_2 - 0.065 11.9 0.4 0.075 11.7 0.4 1.0 1 0 0 1 1 1 0 OPT oligopeptide transporter protein Tht1 PF04163.12 NODE_64531_length_249_cov_42.014019_g56590_i0reverse_frame_3 - 0.044 12.5 0.0 0.049 12.4 0.0 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein CTP_transf_like PF01467.26 NODE_64528_length_249_cov_44.121495_g56587_i0reverse_frame_3 - 0.073 13.3 0.1 0.081 13.1 0.1 1.1 1 0 0 1 1 1 0 Cytidylyltransferase-like PRP3 PF08572.10 NODE_64528_length_249_cov_44.121495_g56587_i0reverse_frame_2 - 0.00047 20.0 5.9 0.00056 19.7 5.9 1.0 1 0 0 1 1 1 1 pre-mRNA processing factor 3 (PRP3) DUF2407 PF10302.9 NODE_64528_length_249_cov_44.121495_g56587_i0reverse_frame_2 - 0.046 14.3 2.8 0.059 13.9 2.8 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain FYVE_2 PF02318.16 NODE_64527_length_249_cov_46.560748_g56586_i0reverse_frame_3 - 0.028 14.6 0.6 0.034 14.4 0.6 1.2 1 0 0 1 1 1 0 FYVE-type zinc finger PHF5 PF03660.14 NODE_64527_length_249_cov_46.560748_g56586_i0reverse_frame_3 - 0.042 14.0 0.7 0.048 13.9 0.7 1.1 1 0 0 1 1 1 0 PHF5-like protein DZR PF12773.7 NODE_64527_length_249_cov_46.560748_g56586_i0reverse_frame_3 - 0.12 12.5 3.7 0.18 11.9 3.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon DUF3593 PF12159.8 NODE_64527_length_249_cov_46.560748_g56586_i0reverse_frame_2 - 0.014 15.4 0.0 0.014 15.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3593) COX7B PF05392.11 NODE_64522_length_249_cov_53.873832_g56581_i0reverse_frame_2 - 0.13 12.0 0.1 0.2 11.4 0.1 1.3 1 1 0 1 1 1 0 Cytochrome C oxidase chain VIIB NACHT PF05729.12 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0001 22.3 0.2 0.00015 21.7 0.2 1.2 1 0 0 1 1 1 1 NACHT domain AAA_33 PF13671.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.00016 21.9 0.2 0.0016 18.6 0.1 2.0 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.00016 21.5 0.3 0.00025 20.9 0.3 1.3 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_16 PF13191.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.00061 20.2 0.0 0.00076 19.9 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain Myosin_head PF00063.21 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0008 17.7 0.1 0.0008 17.7 0.1 1.2 1 0 0 1 1 1 1 Myosin head (motor domain) AAA_19 PF13245.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0011 19.3 0.4 0.0023 18.3 0.1 1.6 1 1 1 2 2 2 1 AAA domain NB-ARC PF00931.22 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0015 17.8 0.0 0.0016 17.7 0.0 1.2 1 0 0 1 1 1 1 NB-ARC domain G-alpha PF00503.20 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0017 17.6 0.2 0.0017 17.6 0.2 1.2 1 0 0 1 1 1 1 G-protein alpha subunit DUF87 PF01935.17 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0017 18.5 0.3 0.0031 17.7 0.3 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain Pox_A32 PF04665.12 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0025 17.3 0.1 0.0042 16.6 0.0 1.4 1 1 0 1 1 1 1 Poxvirus A32 protein RNA_helicase PF00910.22 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0026 18.1 1.3 0.0044 17.4 0.2 1.8 2 0 0 2 2 2 1 RNA helicase Septin PF00735.18 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0029 17.0 0.3 0.0042 16.4 0.1 1.4 1 1 0 1 1 1 1 Septin AAA_22 PF13401.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0034 17.7 0.1 0.0048 17.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.004 16.8 0.3 0.004 16.8 0.3 1.4 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain cobW PF02492.19 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0046 16.6 0.1 0.007 16.0 0.1 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Zeta_toxin PF06414.12 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0048 16.2 0.0 0.0062 15.8 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin Microtub_bd PF16796.5 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0049 16.8 0.1 0.006 16.5 0.1 1.3 1 0 0 1 1 1 1 Microtubule binding TsaE PF02367.17 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.006 16.6 0.1 0.0085 16.1 0.1 1.3 1 1 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0062 17.1 2.1 0.0066 17.0 0.2 1.8 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.0087 15.8 0.7 0.012 15.4 0.2 1.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase 6PF2K PF01591.18 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.011 15.1 0.0 0.015 14.6 0.0 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_24 PF13479.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.012 15.4 0.3 0.019 14.7 0.3 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.014 15.3 0.2 0.023 14.6 0.2 1.4 1 0 0 1 1 1 0 NTPase FtsK_SpoIIIE PF01580.18 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.014 14.8 0.0 0.015 14.7 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family Arf PF00025.21 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.015 14.8 0.1 0.02 14.4 0.1 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family T2SSE PF00437.20 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.018 14.1 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein KAP_NTPase PF07693.14 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.02 14.1 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain MobB PF03205.14 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.021 14.7 1.1 0.031 14.2 0.2 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Mg_chelatase PF01078.21 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.022 14.2 0.0 0.036 13.4 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.028 14.1 0.1 0.035 13.8 0.1 1.2 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.029 14.3 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase KTI12 PF08433.10 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.041 13.3 0.5 0.11 12.0 0.1 1.7 1 1 1 2 2 2 0 Chromatin associated protein KTI12 Roc PF08477.13 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.041 14.1 0.3 0.078 13.2 0.3 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase GTP_EFTU PF00009.27 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.051 13.1 0.4 0.078 12.5 0.1 1.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.061 13.4 0.4 0.13 12.3 0.1 1.6 1 1 1 2 2 2 0 50S ribosome-binding GTPase AAA_14 PF13173.6 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.066 13.3 1.2 0.11 12.6 0.2 1.7 1 1 1 2 2 2 0 AAA domain SMC_N PF02463.19 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_3 - 0.1 12.0 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain PAS PF00989.25 NODE_64522_length_249_cov_53.873832_g56581_i0forward_frame_2 - 0.062 13.3 0.1 0.071 13.1 0.1 1.1 1 0 0 1 1 1 0 PAS fold RNA_pol_Rpa2_4 PF06883.12 NODE_64520_length_249_cov_55.813084_g56579_i0reverse_frame_2 - 0.12 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase I, Rpa2 specific domain SKI PF01202.22 NODE_64520_length_249_cov_55.813084_g56579_i0forward_frame_2 - 0.083 13.0 0.0 0.09 12.9 0.0 1.1 1 0 0 1 1 1 0 Shikimate kinase DDE_Tnp_1_2 PF13586.6 NODE_64519_length_249_cov_57.149533_g56578_i0reverse_frame_2 - 0.012 16.0 1.1 0.013 15.9 0.2 1.5 2 0 0 2 2 2 0 Transposase DDE domain Dsl1_C PF11989.8 NODE_64519_length_249_cov_57.149533_g56578_i0forward_frame_3 - 0.081 12.6 0.2 0.12 12.1 0.2 1.4 1 1 1 2 2 2 0 Retrograde transport protein Dsl1 C terminal zf-RING_2 PF13639.6 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 8.5e-05 22.8 3.7 0.00016 21.9 3.7 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 0.00028 20.8 3.9 0.00057 19.8 3.9 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 0.00078 19.7 4.0 0.00078 19.7 4.0 1.5 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 0.003 17.3 3.5 0.003 17.3 3.5 1.8 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 0.0042 16.9 2.1 0.0042 16.9 2.1 1.5 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_6 PF14835.6 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 0.0093 15.8 0.8 0.015 15.1 0.8 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-ribbon_3 PF13248.6 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 0.013 14.9 0.1 0.026 14.0 0.1 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zf-RING_11 PF17123.5 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 0.013 15.2 3.8 0.015 15.1 0.3 2.3 2 0 0 2 2 2 0 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 0.016 15.0 3.9 0.016 15.0 3.9 1.8 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn-ribbon_8 PF09723.10 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 0.046 13.8 0.3 0.063 13.4 0.3 1.2 1 0 0 1 1 1 0 Zinc ribbon domain zf-RING-like PF08746.11 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 2.7 8.4 8.0 0.76 10.1 5.0 1.6 2 0 0 2 2 2 0 RING-like domain zf-C3H2C3 PF17122.5 NODE_64516_length_249_cov_63.121495_g56575_i0forward_frame_2 - 5.5 7.1 9.9 3.2 7.9 7.3 2.0 2 1 0 2 2 2 0 Zinc-finger PolC_DP2 PF03833.13 NODE_64515_length_249_cov_64.887850_g56574_i0forward_frame_2 - 0.091 10.6 1.6 0.091 10.6 1.6 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Pex26 PF07163.12 NODE_64508_length_249_cov_84.116822_g56567_i0reverse_frame_3 - 0.0036 16.7 4.9 0.0036 16.6 4.9 1.0 1 0 0 1 1 1 1 Pex26 protein PTPS_related PF10131.9 NODE_64508_length_249_cov_84.116822_g56567_i0reverse_frame_3 - 0.014 13.7 4.5 0.015 13.7 4.5 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein TFIIF_alpha PF05793.12 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 0.023 13.3 14.1 0.024 13.2 14.1 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Zip PF02535.22 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 0.9 8.7 2.0 0.95 8.6 2.0 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Connexin PF00029.19 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 1.6 8.4 3.5 1.7 8.3 3.5 1.1 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 3.5 6.3 4.3 3.3 6.4 4.3 1.0 1 0 0 1 1 1 0 Presenilin DTHCT PF08070.11 NODE_64508_length_249_cov_84.116822_g56567_i0forward_frame_2 - 3.8 8.3 26.1 4.5 8.1 26.1 1.1 1 0 0 1 1 1 0 DTHCT (NUC029) region Herpes_U59 PF04529.12 NODE_64505_length_249_cov_97.098131_g56564_i0reverse_frame_2 - 0.19 10.8 0.4 0.21 10.6 0.4 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein Enkurin PF13864.6 NODE_64501_length_249_cov_106.018692_g56560_i0reverse_frame_3 - 5.2e-08 33.2 0.8 7.8e-08 32.7 0.8 1.2 1 0 0 1 1 1 1 Calmodulin-binding Prefoldin_2 PF01920.20 NODE_64501_length_249_cov_106.018692_g56560_i0reverse_frame_3 - 0.034 14.1 0.4 0.045 13.7 0.4 1.1 1 0 0 1 1 1 0 Prefoldin subunit Bcr-Abl_Oligo PF09036.10 NODE_64501_length_249_cov_106.018692_g56560_i0reverse_frame_3 - 0.095 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Bcr-Abl oncoprotein oligomerisation domain Orthopox_B11R PF07033.11 NODE_64499_length_249_cov_109.074766_g56558_i0reverse_frame_3 - 0.15 11.8 0.3 0.26 11.1 0.3 1.3 1 0 0 1 1 1 0 Orthopoxvirus B11R protein DDHD PF02862.17 NODE_64499_length_249_cov_109.074766_g56558_i0reverse_frame_2 - 0.09 12.9 0.0 0.09 12.9 0.0 1.1 1 0 0 1 1 1 0 DDHD domain VirB3 PF05101.13 NODE_64493_length_249_cov_147.523364_g56552_i0forward_frame_2 - 0.072 13.3 0.7 0.094 13.0 0.7 1.2 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein Ribosomal_L4 PF00573.22 NODE_64492_length_249_cov_150.350467_g56551_i0reverse_frame_2 - 0.22 11.2 1.2 0.28 10.8 1.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family Peptidase_C9 PF01707.16 NODE_64490_length_249_cov_157.803738_g56549_i0reverse_frame_2 - 0.096 12.3 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C9 Pneumo_M2 PF07380.11 NODE_64484_length_249_cov_244.915888_g56543_i0reverse_frame_3 - 0.13 12.6 1.0 0.21 11.9 1.0 1.4 1 1 0 1 1 1 0 Pneumovirus M2 protein Enkurin PF13864.6 NODE_64484_length_249_cov_244.915888_g56543_i0forward_frame_3 - 5.2e-08 33.2 0.8 7.8e-08 32.7 0.8 1.2 1 0 0 1 1 1 1 Calmodulin-binding Prefoldin_2 PF01920.20 NODE_64484_length_249_cov_244.915888_g56543_i0forward_frame_3 - 0.034 14.1 0.4 0.045 13.7 0.4 1.1 1 0 0 1 1 1 0 Prefoldin subunit Bcr-Abl_Oligo PF09036.10 NODE_64484_length_249_cov_244.915888_g56543_i0forward_frame_3 - 0.095 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Bcr-Abl oncoprotein oligomerisation domain DUF1418 PF07214.12 NODE_64481_length_249_cov_381.028037_g56540_i0reverse_frame_3 - 0.11 12.4 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) ZZ PF00569.17 NODE_64480_length_249_cov_413.719626_g56539_i0forward_frame_3 - 0.018 14.8 0.1 0.083 12.7 0.0 1.8 2 0 0 2 2 2 0 Zinc finger, ZZ type ERGIC_N PF13850.6 NODE_64480_length_249_cov_413.719626_g56539_i0forward_frame_3 - 0.026 14.8 0.1 0.033 14.5 0.1 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) FTSW_RODA_SPOVE PF01098.19 NODE_64480_length_249_cov_413.719626_g56539_i0forward_frame_3 - 0.12 11.3 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Cell cycle protein Tuberin PF03542.16 NODE_64480_length_249_cov_413.719626_g56539_i0forward_frame_3 - 0.14 11.2 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 Tuberin EF1_GNE PF00736.19 NODE_64479_length_249_cov_475.210280_g56538_i0reverse_frame_3 - 0.03 14.5 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 EF-1 guanine nucleotide exchange domain UNC119_bdg PF15435.6 NODE_64475_length_249_cov_8351.588785_g56534_i0forward_frame_2 - 0.062 12.8 0.0 0.085 12.4 0.0 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue LPD23 PF18838.1 ORF99520 - 0.16 11.8 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 23 Glyco_trans_4_2 PF13477.6 ORF99332 - 0.07 13.2 0.0 0.079 13.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase 4-like ParA PF10609.9 ORF99332 - 0.093 12.2 0.2 0.1 12.0 0.2 1.1 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Pep1_7 PF17232.2 ORF99318 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF99318 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF99318 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF99318 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 BioY PF02632.14 ORF98861 - 0.076 13.1 1.7 0.079 13.0 1.7 1.1 1 0 0 1 1 1 0 BioY family ADAM17_MPD PF16698.5 ORF9862 - 0.043 14.2 2.6 0.043 14.2 2.6 1.6 2 0 0 2 2 2 0 Membrane-proximal domain, switch, for ADAM17 PAN_3 PF08277.12 ORF98348 - 0.47 10.3 9.5 0.46 10.3 7.1 1.9 1 1 1 2 2 2 0 PAN-like domain YrvL PF14184.6 ORF96393 - 0.11 12.6 8.0 0.12 12.5 8.0 1.0 1 0 0 1 1 1 0 Regulatory protein YrvL amfpi-1 PF12190.8 ORF96309 - 0.031 14.9 1.3 0.04 14.5 1.3 1.2 1 0 0 1 1 1 0 Fungal protease inhibitor Hep_core_N PF08290.11 ORF96232 - 2.8 8.0 11.9 1.6 8.8 8.4 2.4 2 1 0 2 2 2 0 Hepatitis core protein, putative zinc finger TALPID3 PF15324.6 ORF96119 - 0.014 13.1 0.3 0.014 13.1 0.3 1.0 1 0 0 1 1 1 0 Hedgehog signalling target DUF4252 PF14060.6 ORF96119 - 0.083 12.8 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) Adaptin_binding PF10199.9 ORF96119 - 0.12 12.9 1.5 0.17 12.5 1.5 1.3 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Vma12 PF11712.8 ORF95830 - 0.38 10.8 2.2 0.46 10.6 2.2 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase E2 PF08199.11 ORF95530 - 0.0034 17.3 7.6 0.01 15.7 7.6 1.9 1 1 0 1 1 1 1 Bacteriophage E2-like protein ACOX PF01756.19 ORF95450 - 0.11 12.0 0.2 0.12 11.9 0.2 1.1 1 0 0 1 1 1 0 Acyl-CoA oxidase AbiJ_NTD3 PF18860.1 ORF95450 - 0.15 11.5 0.1 0.17 11.4 0.1 1.1 1 0 0 1 1 1 0 AbiJ N-terminal domain 3 Ribosomal_S6 PF01250.17 ORF95146 - 5.3e-10 39.4 0.0 6.1e-10 39.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S6 Med17 PF10156.9 ORF94871 - 0.094 11.4 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Subunit 17 of Mediator complex UAF_Rrn10 PF05234.11 ORF94189 - 0.07 13.4 0.0 0.073 13.3 0.0 1.1 1 0 0 1 1 1 0 UAF complex subunit Rrn10 DUF5415 PF17436.2 ORF94189 - 0.096 12.8 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5415) Pep1_7 PF17232.2 ORF94161 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF94161 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF94161 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF94161 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Hit1_C PF18268.1 ORF92786 - 0.011 15.8 0.0 0.013 15.7 0.0 1.2 1 0 0 1 1 1 0 Hit1 C-terminal Baculo_LEF-10 PF07206.11 ORF92622 - 0.23 11.6 1.7 0.32 11.2 0.5 1.8 2 1 0 2 2 2 0 Baculovirus late expression factor 10 (LEF-10) DUF1128 PF06569.11 ORF92622 - 0.48 10.4 5.7 0.11 12.5 1.9 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF1128) NIF PF03031.18 ORF9212 - 4.1e-05 23.4 0.0 4.5e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase SPATA9 PF15824.5 ORF90912 - 0.09 12.0 0.8 0.13 11.6 0.8 1.2 1 1 0 1 1 1 0 Spermatogenesis-associated protein 9 DUF1540 PF07561.11 ORF89852 - 0.0017 18.6 3.3 0.0036 17.6 3.3 1.5 1 1 0 1 1 1 1 Domain of Unknown Function (DUF1540) Pep1_7 PF17232.2 ORF89705 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF89705 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF89705 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF89705 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Bcl-2_BAD PF10514.9 ORF8959 - 0.08 13.4 0.6 0.12 12.9 0.3 1.4 1 1 0 1 1 1 0 Pro-apoptotic Bcl-2 protein, BAD Pep1_7 PF17232.2 ORF89584 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF89584 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF89584 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF89584 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 DDE_3 PF13358.6 ORF89145 - 0.0069 16.1 0.0 0.0088 15.8 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease Pneumovirus_M2 PF06436.11 ORF89107 - 0.013 15.0 0.5 0.014 14.9 0.5 1.1 1 0 0 1 1 1 0 Pneumovirus matrix protein 2 (M2) Peptidase_Prp PF04327.12 ORF89107 - 0.12 12.6 0.2 0.15 12.3 0.2 1.2 1 0 0 1 1 1 0 Cysteine protease Prp SID PF11778.8 ORF88821 - 0.2 11.7 4.7 0.21 11.7 4.7 1.1 1 0 0 1 1 1 0 Septation initiation Topoisom_I PF01028.20 ORF88536 - 0.003 16.8 0.8 0.0053 16.0 0.8 1.5 1 1 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core DnaA_N PF11638.8 ORF88536 - 0.07 12.9 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 DnaA N-terminal domain TOH_N PF12549.8 ORF88473 - 0.16 11.9 0.8 0.16 11.9 0.8 1.7 2 0 0 2 2 2 0 Tyrosine hydroxylase N terminal NOD PF06816.13 ORF88452 - 0.021 14.5 0.2 0.03 14.0 0.2 1.2 1 0 0 1 1 1 0 NOTCH protein HTH_26 PF13443.6 ORF8830 - 0.12 12.9 0.0 0.16 12.5 0.0 1.2 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF2207 PF09972.9 ORF88157 - 0.11 11.2 0.7 0.14 10.9 0.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) GW PF13457.6 ORF88119 - 0.038 14.6 0.5 0.047 14.3 0.5 1.3 1 0 0 1 1 1 0 GW (Gly-Tryp) dipeptide domain Av_adeno_fibre PF06536.11 ORF87868 - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Avian adenovirus fibre, N-terminal BsuBI_PstI_RE PF06616.11 ORF8747 - 0.052 12.8 0.1 0.058 12.7 0.1 1.1 1 0 0 1 1 1 0 BsuBI/PstI restriction endonuclease domain zf-SAP30 PF13866.6 ORF87 - 0.56 10.3 6.3 0.42 10.8 2.1 2.0 2 0 0 2 2 2 0 SAP30 zinc-finger Biliv-reduc_cat PF09166.10 ORF86707 - 0.028 14.8 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 Biliverdin reductase, catalytic Med7 PF05983.11 ORF86665 - 0.034 14.2 2.0 0.041 14.0 2.0 1.1 1 0 0 1 1 1 0 MED7 protein TACI-CRD2 PF09305.10 ORF85938 - 0.038 14.0 0.3 0.038 14.0 0.3 1.6 2 0 0 2 2 2 0 TACI, cysteine-rich domain DUF3397 PF11877.8 ORF84199 - 0.88 9.8 14.7 8.8 6.6 14.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3397) Pep1_7 PF17232.2 ORF83774 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF83774 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF83774 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF83774 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 DUF1158 PF06643.11 ORF82833 - 1.2e-45 153.9 9.1 1.3e-45 153.8 9.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1158) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks328.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks328.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks328.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks328.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5504 PF17608.2 ORF82264 - 0.027 14.6 2.2 0.031 14.4 2.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5504) ERGIC_N PF13850.6 ORF81388 - 0.0036 17.6 0.4 0.0043 17.4 0.4 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Pertussis_S2S3 PF02918.15 ORF81388 - 0.046 13.7 0.0 0.058 13.3 0.0 1.2 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain TALPID3 PF15324.6 ORF81132 - 0.014 13.1 0.3 0.014 13.1 0.3 1.0 1 0 0 1 1 1 0 Hedgehog signalling target DUF4252 PF14060.6 ORF81132 - 0.083 12.8 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) Adaptin_binding PF10199.9 ORF81132 - 0.12 12.9 1.5 0.17 12.5 1.5 1.3 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Med4 PF10018.9 ORF8067 - 0.17 11.6 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 PilN PF05137.13 ORF80520 - 0.039 14.1 0.1 0.049 13.8 0.1 1.1 1 0 0 1 1 1 0 Fimbrial assembly protein (PilN) AA_permease_N PF08403.10 ORF80520 - 0.12 11.9 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Amino acid permease N-terminal DUF3217 PF11506.8 ORF80472 - 0.002 18.1 0.8 0.0026 17.7 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3217) DUF35_N PF12172.8 ORF80109 - 0.13 12.1 0.5 0.13 12.1 0.5 1.6 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Albumin_I PF08027.11 ORF80069 - 0.013 15.1 1.0 0.026 14.1 1.0 1.5 1 0 0 1 1 1 0 Albumin I chain b NOD PF06816.13 ORF79119 - 0.021 14.5 0.2 0.03 14.0 0.2 1.2 1 0 0 1 1 1 0 NOTCH protein DUF2039 PF10217.9 ORF78551 - 0.015 15.6 7.0 0.069 13.5 5.7 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2039) CENP-B_N PF04218.13 ORF78551 - 0.077 12.6 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain 4HPAD_g_N PF18671.1 ORF78526 - 0.049 13.4 0.4 0.094 12.4 0.4 1.4 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal DUF2977 PF11192.8 ORF78063 - 0.041 14.0 1.0 0.058 13.5 1.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2977) DNA_pol3_tau_4 PF12168.8 ORF77847 - 0.051 14.1 2.4 0.063 13.8 2.4 1.2 1 0 0 1 1 1 0 DNA polymerase III subunits tau domain IV DnaB-binding DUF2768 PF10966.8 ORF77160 - 0.099 13.1 2.5 0.27 11.7 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2768) Propeptide_C25 PF08126.11 ORF76418 - 0.035 13.2 0.0 0.036 13.2 0.0 1.1 1 0 0 1 1 1 0 Propeptide_C25 BA14K PF07886.11 ORF76418 - 2.7 7.9 5.9 1.4 8.8 2.3 2.3 1 1 1 2 2 2 0 BA14K-like protein Spexin PF15171.6 ORF76408 - 0.0029 17.8 0.0 0.0036 17.5 0.0 1.2 1 0 0 1 1 1 1 Neuropeptide secretory protein family, NPQ, spexin DUF1656 PF07869.12 ORF76340 - 0.056 13.5 0.9 0.083 12.9 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1656) SHIPPO-rpt PF07004.12 ORF76049 - 0.00053 20.8 3.9 0.047 14.6 3.6 2.3 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat DUF3301 PF11743.8 ORF76049 - 0.19 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) Clr5 PF14420.6 ORF75621 - 0.041 14.1 0.7 0.059 13.6 0.7 1.3 1 0 0 1 1 1 0 Clr5 domain Paramyxo_P_V_N PF13825.6 ORF75057 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus LPAM_2 PF13627.6 ORF74794 - 2.5 8.0 11.8 0.97 9.4 0.7 2.3 2 0 0 2 2 2 0 Prokaryotic lipoprotein-attachment site zf-like PF04071.12 ORF73515 - 0.0091 15.9 0.1 0.014 15.3 0.1 1.4 1 0 0 1 1 1 1 Cysteine-rich small domain ERGIC_N PF13850.6 ORF73359 - 0.031 14.6 0.2 0.037 14.4 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) T4SS_CagC PF16943.5 ORF73359 - 0.065 13.4 0.0 0.073 13.3 0.0 1.1 1 0 0 1 1 1 0 Cag pathogenicity island, type IV secretory system DUF5053 PF16476.5 ORF73359 - 0.099 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5053) Rgp1 PF08737.10 ORF72751 - 0.0064 15.7 0.2 0.0076 15.5 0.2 1.0 1 0 0 1 1 1 1 Rgp1 DUF416 PF04222.12 ORF72170 - 0.13 11.7 2.1 0.15 11.5 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF416) DUF35_N PF12172.8 ORF71837 - 0.21 11.5 1.3 1.9 8.4 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) PSY3 PF16836.5 ORF70927 - 0.16 11.4 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 Shu complex component Psy3, DNA-binding description KxDL PF10241.9 ORF70108 - 0.094 13.0 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein GCHY-1 PF02649.14 ORF69942 - 0.36 10.3 1.9 0.35 10.4 1.9 1.0 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 DUF4516 PF14990.6 ORF69912 - 0.16 11.7 0.4 0.27 11.0 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4516) Pneumovirus_M2 PF06436.11 ORF69569 - 0.025 14.1 0.2 0.027 14.0 0.2 1.1 1 0 0 1 1 1 0 Pneumovirus matrix protein 2 (M2) Paramyxo_P_V_N PF13825.6 ORF69554 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus DAO PF01266.24 ORF68372 - 0.00076 19.2 0.0 0.0009 18.9 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase TerY_C PF15616.6 ORF67973 - 0.13 12.3 0.3 0.17 12.0 0.3 1.2 1 0 0 1 1 1 0 TerY-C metal binding domain Mnd1 PF03962.15 ORF67936 - 0.19 12.1 0.0 0.28 11.5 0.0 1.3 1 0 0 1 1 1 0 Mnd1 HTH domain Pkinase PF00069.25 ORF67252 - 6.4e-05 22.4 0.1 0.0001 21.7 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67252 - 0.065 12.5 0.1 0.09 12.0 0.1 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase DUF3157 PF11355.8 ORF67187 - 0.11 12.1 7.8 0.13 11.9 7.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3157) Med3 PF11593.8 ORF67187 - 0.15 11.3 13.5 0.14 11.3 13.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF5129 PF17173.4 ORF66740 - 0.07 12.2 0.1 0.078 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) TaqI_C PF12950.7 ORF65700 - 0.094 12.8 0.4 0.11 12.5 0.4 1.1 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain DUF1128 PF06569.11 ORF64184 - 0.4 10.7 5.9 0.099 12.6 1.9 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1128) zf-DNL PF05180.12 ORF64003 - 0.096 12.6 6.3 0.15 12.0 6.3 1.4 1 0 0 1 1 1 0 DNL zinc finger CoA_binding_2 PF13380.6 ORF63510 - 0.036 14.6 0.0 0.039 14.4 0.0 1.1 1 0 0 1 1 1 0 CoA binding domain DUF494 PF04361.13 ORF63510 - 0.04 13.8 0.0 0.047 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF494) Fz PF01392.22 ORF63230 - 0.021 15.4 0.9 0.024 15.3 0.9 1.1 1 0 0 1 1 1 0 Fz domain GXWXG PF14231.6 ORF62003 - 0.022 14.8 0.2 0.032 14.3 0.2 1.3 1 0 0 1 1 1 0 GXWXG protein Sclerostin PF05463.11 ORF61579 - 0.012 15.3 0.6 0.013 15.2 0.6 1.1 1 0 0 1 1 1 0 Sclerostin (SOST) NESP55 PF06390.12 ORF61229 - 0.4 10.3 1.4 0.43 10.1 1.4 1.1 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) DUF3086 PF11285.8 ORF59179 - 0.062 12.4 2.3 0.072 12.2 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) PVL_ORF50 PF07768.11 ORF59179 - 0.077 13.3 4.1 0.092 13.1 4.1 1.2 1 0 0 1 1 1 0 PVL ORF-50-like family UPF0239 PF06783.11 ORF59179 - 4.9 7.4 7.5 6.6 7.0 7.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) FAM91_C PF14648.6 ORF5917 - 0.074 11.9 0.0 0.074 11.9 0.0 1.1 1 0 0 1 1 1 0 FAM91 C-terminus CENP-M PF11111.8 ORF59125 - 0.2 10.8 0.2 0.29 10.3 0.2 1.2 1 0 0 1 1 1 0 Centromere protein M (CENP-M) Arnt_C PF18583.1 ORF59069 - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Aminoarabinose transferase C-terminal domain Ribosomal_S16 PF00886.19 ORF58846 - 1.7e-24 85.7 0.0 2e-24 85.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S16 DUF5527 PF17665.1 ORF58659 - 0.056 13.0 0.4 0.093 12.3 0.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5527) TMEM52 PF14979.6 ORF58326 - 0.085 12.8 3.6 0.095 12.6 3.6 1.2 1 0 0 1 1 1 0 Transmembrane 52 Ldr_toxin PF13940.6 ORF5704 - 0.13 12.3 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system DNA_ligase_C PF17879.1 ORF56971 - 0.15 12.1 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 DNA ligase C-terminal domain BRCA-2_OB3 PF09104.10 ORF56750 - 0.011 15.4 0.1 0.011 15.4 0.1 1.1 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 NOD PF06816.13 ORF56466 - 0.021 14.5 0.2 0.03 14.0 0.2 1.2 1 0 0 1 1 1 0 NOTCH protein Ribosomal_L22e PF01776.17 ORF55278 - 0.095 13.1 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal L22e protein family ADP_PFK_GK PF04587.15 ORF5523 - 0.27 9.8 1.6 0.29 9.6 1.6 1.0 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region CBM49 PF09478.10 ORF52759 - 0.017 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate binding domain CBM49 FBPase_2 PF06874.11 ORF52759 - 0.09 11.1 0.5 0.1 10.8 0.5 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase Rad10 PF03834.14 ORF52536 - 0.026 14.6 0.1 0.03 14.3 0.1 1.1 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) IFT46_B_C PF12317.8 ORF51990 - 0.012 15.3 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Intraflagellar transport complex B protein 46 C terminal ODV-E18 PF10717.9 ORF51675 - 0.1 12.5 0.4 0.14 12.0 0.4 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 YqfQ PF14181.6 ORF51278 - 0.015 15.5 0.1 0.017 15.3 0.1 1.0 1 0 0 1 1 1 0 YqfQ-like protein CBM49 PF09478.10 ORF5098 - 0.017 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate binding domain CBM49 FBPase_2 PF06874.11 ORF5098 - 0.09 11.1 0.5 0.1 10.8 0.5 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase Ku_PK_bind PF08785.11 ORF50874 - 0.14 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Ku C terminal domain like FACT-Spt16_Nlob PF14826.6 ORF50300 - 0.07 12.9 3.1 0.091 12.6 3.1 1.1 1 0 0 1 1 1 0 FACT complex subunit SPT16 N-terminal lobe domain DUF3717 PF12512.8 ORF49441 - 0.11 12.4 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3717) MORN PF02493.20 ORF49308 - 1.2e-07 31.2 7.2 0.0007 19.3 1.0 4.1 4 0 0 4 4 4 2 MORN repeat Bactofilin PF04519.13 ORF49308 - 0.049 13.9 0.1 0.058 13.7 0.1 1.1 1 0 0 1 1 1 0 Polymer-forming cytoskeletal FSA_C PF10479.9 ORF48698 - 0.19 9.8 0.4 0.22 9.6 0.4 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Myc_target_1 PF15179.6 ORF48243 - 0.026 14.4 0.7 0.027 14.4 0.7 1.1 1 0 0 1 1 1 0 Myc target protein 1 NS3 PF17530.2 ORF47689 - 0.068 12.7 0.1 0.068 12.7 0.1 1.0 1 0 0 1 1 1 0 Non-structural protein NS3 cNMP_binding PF00027.29 ORF47509 - 0.14 12.3 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Glyco_hydro_98C PF08307.11 ORF47126 - 0.0011 18.5 1.9 0.0011 18.5 1.9 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 98 C-terminal domain Plant_NMP1 PF06694.11 ORF46082 - 0.016 14.3 0.1 0.017 14.2 0.1 1.0 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) UL20 PF17582.2 ORF45937 - 0.35 10.1 4.4 0.29 10.4 4.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 Pico_P2B PF01552.17 ORF44412 - 0.059 13.5 0.0 0.071 13.3 0.0 1.2 1 0 0 1 1 1 0 Picornavirus 2B protein Cation_efflux PF01545.21 ORF43719 - 0.043 13.6 0.2 0.05 13.3 0.2 1.2 1 0 0 1 1 1 0 Cation efflux family Fumarate_red_C PF02300.17 ORF43114 - 0.0041 17.2 0.8 0.0048 17.0 0.8 1.1 1 0 0 1 1 1 1 Fumarate reductase subunit C DUF4232 PF14016.6 ORF42920 - 0.0073 16.4 0.0 0.0086 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4232) PPL4 PF18188.1 ORF42211 - 0.021 14.8 0.1 0.022 14.7 0.1 1.1 1 0 0 1 1 1 0 Prim-pol 4 bZIP_Maf PF03131.17 ORF42116 - 0.086 13.4 1.8 0.11 13.0 1.8 1.1 1 0 0 1 1 1 0 bZIP Maf transcription factor PHD_2 PF13831.6 ORF42093 - 0.019 14.5 0.5 0.019 14.5 0.5 2.1 2 0 0 2 2 2 0 PHD-finger MTA_R1 PF17226.2 ORF42093 - 0.053 13.7 0.0 0.069 13.3 0.0 1.3 1 0 0 1 1 1 0 MTA R1 domain Ketoacyl-synt_C PF02801.22 ORF42093 - 0.056 13.5 0.1 0.096 12.7 0.1 1.4 1 1 1 2 2 2 0 Beta-ketoacyl synthase, C-terminal domain DUF1283 PF06932.11 ORF41732 - 0.13 12.5 2.9 0.51 10.6 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1283) Alkyl_sulf_C PF14864.6 ORF40903 - 0.055 13.7 1.0 0.067 13.5 1.0 1.1 1 0 0 1 1 1 0 Alkyl sulfatase C-terminal Retrotran_gag_2 PF14223.6 ORF40690 - 0.044 13.4 0.0 0.062 13.0 0.0 1.2 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type Peptidase_S78 PF04586.17 ORF40611 - 0.064 13.4 0.0 1.6 8.9 0.0 2.0 2 0 0 2 2 2 0 Caudovirus prohead serine protease Herpes_UL49_2 PF04823.12 ORF39501 - 0.067 13.3 0.1 0.085 13.0 0.1 1.3 1 0 0 1 1 1 0 Herpesvirus UL49 tegument protein CSG2 PF16965.5 ORF39478 - 0.001 18.2 0.3 0.0011 18.0 0.3 1.0 1 0 0 1 1 1 1 Ceramide synthase regulator DUF2528 PF10800.8 ORF38477 - 0.041 14.5 0.2 0.048 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2528) DUF4846 PF16138.5 ORF38128 - 0.0067 16.0 0.0 0.0067 16.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (4846) Kisspeptin PF15152.6 ORF37996 - 0.026 15.3 0.4 0.031 15.0 0.4 1.3 1 0 0 1 1 1 0 Kisspeptin MOZART1 PF12554.8 ORF37440 - 1.7e-21 75.7 0.2 2.4e-21 75.3 0.2 1.2 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated Il13Ra_Ig PF18001.1 ORF36492 - 0.0075 16.3 0.2 0.011 15.8 0.2 1.3 1 0 0 1 1 1 1 Interleukin-13 receptor subunit alpha Ig-like domain AA_permease_C PF13906.6 ORF36402 - 0.0087 16.1 3.5 0.0087 16.1 3.5 1.8 2 0 0 2 2 2 1 C-terminus of AA_permease CATSPERB PF15149.6 ORF36053 - 4.3 5.7 5.6 4.7 5.6 5.6 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit beta protein family DUF4780 PF16012.5 ORF35431 - 0.079 12.4 0.1 0.096 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4780) Tmemb_170 PF10190.9 ORF34782 - 0.034 14.5 3.5 0.042 14.2 3.5 1.3 1 1 0 1 1 1 0 Putative transmembrane protein 170 CTP_synth_N PF06418.14 ORF34241 - 0.029 13.7 0.2 0.032 13.6 0.2 1.0 1 0 0 1 1 1 0 CTP synthase N-terminus MH1 PF03165.16 ORF33835 - 0.0029 17.8 0.4 0.0034 17.6 0.4 1.2 1 0 0 1 1 1 1 MH1 domain Pep1_7 PF17232.2 ORF33790 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF33790 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF33790 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF33790 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 ERGIC_N PF13850.6 ORF33579 - 0.002 18.4 0.1 0.0023 18.2 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Imm17 PF15562.6 ORF33579 - 0.026 14.4 0.4 0.038 13.8 0.4 1.4 1 0 0 1 1 1 0 Immunity protein 17 Herpes_US9 PF06072.11 ORF33579 - 0.1 12.5 0.1 0.14 12.1 0.1 1.3 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 Mt_ATP-synt_B PF05405.14 ORF33066 - 1.1 8.9 3.6 1.4 8.5 3.6 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) zf-TRAF PF02176.18 ORF31237 - 0.026 15.2 4.0 0.037 14.7 4.0 1.2 1 0 0 1 1 1 0 TRAF-type zinc finger 4HPAD_g_N PF18671.1 ORF30977 - 0.048 13.4 0.4 0.094 12.4 0.4 1.4 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal DUF3156 PF11354.8 ORF30938 - 0.092 12.7 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3156) NOD PF06816.13 ORF27486 - 0.021 14.5 0.2 0.03 14.0 0.2 1.2 1 0 0 1 1 1 0 NOTCH protein S1 PF00575.23 ORF27043 - 0.0039 17.5 0.1 0.0047 17.3 0.1 1.2 1 0 0 1 1 1 1 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF27043 - 0.026 14.5 0.1 0.04 13.8 0.1 1.3 1 0 0 1 1 1 0 RNase II-type exonuclease C-terminal S1 domain MGC-24 PF05283.11 ORF26564 - 0.6 10.6 3.4 0.75 10.2 3.4 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin ADP_PFK_GK PF04587.15 ORF26487 - 0.27 9.8 1.6 0.29 9.6 1.6 1.0 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region PHTB1_C PF14728.6 ORF25522 - 0.01 15.0 0.1 0.01 14.9 0.1 1.0 1 0 0 1 1 1 0 PTHB1 C-terminus DUF261 PF03196.13 ORF23370 - 0.16 12.1 3.3 0.22 11.6 2.4 1.6 1 1 1 2 2 2 0 Protein of unknown function, DUF261 NOD PF06816.13 ORF22035 - 0.021 14.5 0.2 0.03 14.0 0.2 1.2 1 0 0 1 1 1 0 NOTCH protein BioY PF02632.14 ORF21677 - 0.076 13.1 1.7 0.079 13.0 1.7 1.1 1 0 0 1 1 1 0 BioY family DUF2528 PF10800.8 ORF20894 - 0.041 14.5 0.2 0.048 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2528) MBDa PF16564.5 ORF20585 - 0.004 17.3 0.9 0.0055 16.9 0.9 1.2 1 0 0 1 1 1 1 p55-binding region of Methyl-CpG-binding domain proteins MBD amfpi-1 PF12190.8 ORF20535 - 0.031 14.9 1.3 0.04 14.5 1.3 1.2 1 0 0 1 1 1 0 Fungal protease inhibitor Spec3 PF15795.5 ORF20293 - 0.00019 21.9 16.2 0.017 15.6 16.2 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein MAGI_u1 PF16663.5 ORF19604 - 0.061 13.4 0.7 0.088 12.9 0.7 1.3 1 0 0 1 1 1 0 Unstructured region on MAGI EcoRII-C PF09019.11 ORF19330 - 0.057 13.5 0.3 0.07 13.2 0.3 1.1 1 0 0 1 1 1 0 EcoRII C terminal Ly49 PF08391.10 ORF17491 - 1.3 9.4 4.6 1.5 9.2 4.6 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region DUF1168 PF06658.12 ORF152786 - 0.056 13.3 2.4 0.055 13.3 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Ribosomal_S27e PF01667.17 ORF152610 - 1.7e-24 85.3 2.1 2e-24 85.0 2.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 ORF152610 - 0.0025 17.3 1.1 0.0025 17.3 1.1 1.5 2 0 0 2 2 2 1 TFIIB zinc-binding zf-ACC PF17848.1 ORF152610 - 0.0029 17.6 3.1 0.71 10.0 0.4 2.2 2 0 0 2 2 2 2 Acetyl-coA carboxylase zinc finger domain DUF1116 PF06545.11 ORF152610 - 0.0079 15.7 0.0 0.0092 15.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1116) zf-ribbon_3 PF13248.6 ORF152610 - 0.0084 15.5 1.1 1.2 8.6 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.6 ORF152610 - 0.018 14.9 2.4 0.54 10.2 2.4 2.3 1 1 0 1 1 1 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF152610 - 0.11 12.5 0.2 0.14 12.1 0.2 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbon domain ZZ PF00569.17 ORF152610 - 0.13 12.1 2.9 0.86 9.5 0.3 2.2 1 1 1 2 2 2 0 Zinc finger, ZZ type TALPID3 PF15324.6 ORF152245 - 0.014 13.1 0.3 0.014 13.1 0.3 1.0 1 0 0 1 1 1 0 Hedgehog signalling target DUF4252 PF14060.6 ORF152245 - 0.083 12.8 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) Adaptin_binding PF10199.9 ORF152245 - 0.12 12.9 1.5 0.17 12.5 1.5 1.3 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 PilN PF05137.13 ORF152162 - 0.039 14.1 0.1 0.049 13.8 0.1 1.1 1 0 0 1 1 1 0 Fimbrial assembly protein (PilN) AA_permease_N PF08403.10 ORF152162 - 0.12 11.9 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Amino acid permease N-terminal Ribosomal_S21e PF01249.18 ORF152155 - 2.3e-30 104.5 0.1 2.5e-30 104.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S21e DUF4995 PF16386.5 ORF152018 - 0.037 14.0 0.1 0.045 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function MOZART1 PF12554.8 ORF151279 - 1.7e-21 75.7 0.2 2.4e-21 75.3 0.2 1.2 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated Arabinose_Isome PF02610.15 ORF151006 - 0.016 14.5 0.1 0.016 14.5 0.1 1.1 1 0 0 1 1 1 0 L-arabinose isomerase Cas6b_N PF17955.1 ORF150858 - 0.048 13.7 2.4 0.2 11.7 0.1 2.0 1 1 1 2 2 2 0 Cas6b N-terminal domain EMC3_TMCO1 PF01956.16 ORF150858 - 7.1 6.3 12.1 5.2 6.8 11.0 1.4 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like NOT2_3_5 PF04153.18 ORF150763 - 8.8e-22 77.6 9.1 9.5e-22 77.5 9.1 1.0 1 0 0 1 1 1 1 NOT2 / NOT3 / NOT5 family DUF3206 PF11472.8 ORF150755 - 0.017 15.1 0.3 0.021 14.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3206) CoA_binding_2 PF13380.6 ORF150430 - 0.036 14.6 0.0 0.039 14.4 0.0 1.1 1 0 0 1 1 1 0 CoA binding domain DUF494 PF04361.13 ORF150430 - 0.04 13.8 0.0 0.047 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF494) DUF2514 PF10721.9 ORF150176 - 0.016 15.3 2.4 0.019 15.0 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2514) Cas_NE0113 PF09623.10 ORF150176 - 0.043 13.5 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) zf-Tim10_DDP PF02953.15 ORF149802 - 5.9e-07 29.0 1.0 8.1e-07 28.6 1.0 1.2 1 0 0 1 1 1 1 Tim10/DDP family zinc finger ER PF01133.17 ORF149802 - 0.0069 16.4 0.1 0.0082 16.1 0.1 1.1 1 0 0 1 1 1 1 Enhancer of rudimentary Flg_bbr_C PF06429.13 ORF148902 - 5e-28 97.1 1.9 5.5e-28 96.9 1.9 1.0 1 0 0 1 1 1 1 Flagellar basal body rod FlgEFG protein C-terminal Acetyltransf_19 PF18015.1 ORF148902 - 0.024 14.9 0.0 0.032 14.5 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF4225 PF13988.6 ORF148404 - 0.053 13.1 0.9 0.057 13.0 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4225) Nucleoside_tran PF01733.18 ORF148213 - 4.1e-15 56.0 0.1 4.7e-15 55.8 0.1 1.0 1 0 0 1 1 1 1 Nucleoside transporter MFS_1 PF07690.16 ORF148213 - 0.031 13.2 0.1 0.035 13.1 0.1 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily Sulf_transp PF04143.14 ORF148213 - 0.04 13.5 0.1 0.043 13.4 0.1 1.0 1 0 0 1 1 1 0 Sulphur transport DUF3449 PF11931.8 ORF147949 - 0.12 12.1 1.6 0.15 11.9 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) DUF2777 PF10949.8 ORF146488 - 0.063 12.9 0.8 0.077 12.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) OS-D PF03392.13 ORF146255 - 0.057 13.5 2.9 0.069 13.3 2.9 1.2 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D Atthog PF18800.1 ORF146220 - 0.0083 16.0 0.8 0.0094 15.9 0.8 1.1 1 0 0 1 1 1 1 Attenuator of Hedgehog BROMI PF14961.6 ORF146144 - 0.023 12.1 0.1 0.023 12.1 0.1 1.0 1 0 0 1 1 1 0 Broad-minded protein Crystall_4 PF17945.1 ORF146144 - 0.072 13.6 0.0 0.096 13.1 0.0 1.2 1 0 0 1 1 1 0 Beta/Gamma crystallin DUF2990 PF11693.8 ORF145235 - 0.012 15.7 0.1 0.017 15.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) Matrilin_ccoil PF10393.9 ORF145235 - 0.022 14.6 0.0 0.029 14.2 0.0 1.2 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin p31comet PF06581.12 ORF144651 - 0.028 13.6 0.0 0.032 13.4 0.0 1.0 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding DUF2367 PF10164.9 ORF144167 - 0.06 13.8 0.1 0.068 13.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) PCM1_C PF15717.5 ORF144005 - 0.074 11.8 0.3 0.079 11.7 0.3 1.0 1 0 0 1 1 1 0 Pericentriolar material 1 C terminus Deltaretro_Tax PF05599.11 ORF142589 - 0.11 13.0 3.3 0.058 13.9 1.2 1.7 1 1 1 2 2 2 0 Deltaretrovirus Tax protein DUF5035 PF16438.5 ORF14209 - 0.012 15.5 0.1 0.013 15.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5035) Pep1_7 PF17232.2 ORF142072 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF142072 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF142072 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF142072 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Kazal_2 PF07648.15 ORF14118 - 0.038 14.1 0.3 0.055 13.6 0.3 1.2 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain AA_permease PF00324.21 ORF14068 - 4.1e-10 38.9 2.7 4.3e-10 38.8 2.7 1.0 1 0 0 1 1 1 1 Amino acid permease DUF2061 PF09834.9 ORF140629 - 0.063 13.8 0.5 0.092 13.3 0.5 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2061) PP-binding PF00550.25 ORF140068 - 4.9e-13 49.2 0.7 5.5e-13 49.1 0.7 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site CBM49 PF09478.10 ORF139740 - 0.017 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate binding domain CBM49 FBPase_2 PF06874.11 ORF139740 - 0.09 11.1 0.5 0.1 10.8 0.5 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase Pep1_7 PF17232.2 ORF139659 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF139659 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF139659 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF139659 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 PROCT PF08084.11 ORF13936 - 7.7e-30 103.4 0.2 8.2e-30 103.3 0.2 1.0 1 0 0 1 1 1 1 PROCT (NUC072) domain CAF1-p150_N PF15557.6 ORF139193 - 0.024 14.6 0.2 0.03 14.2 0.2 1.1 1 0 0 1 1 1 0 CAF1 complex subunit p150, region binding to PCNA SR-25 PF10500.9 ORF139188 - 0.038 13.6 3.3 0.046 13.3 3.3 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein MCC-bdg_PDZ PF10506.9 ORF139122 - 0.081 13.0 0.0 0.12 12.5 0.0 1.3 1 1 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Ku_PK_bind PF08785.11 ORF137472 - 0.14 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Ku C terminal domain like ARTD15_N PF18084.1 ORF136908 - 0.1 12.9 0.1 0.17 12.1 0.1 1.3 1 0 0 1 1 1 0 ARTD15 N-terminal domain DUF2243 PF10002.9 ORF136731 - 0.037 14.1 0.5 0.13 12.4 0.5 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2243) CRF-BP PF05428.11 ORF135792 - 0.083 11.7 0.0 0.083 11.7 0.0 1.1 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) Gag_spuma PF03276.14 ORF135661 - 0.23 9.9 5.8 0.24 9.8 5.8 1.0 1 0 0 1 1 1 0 Spumavirus gag protein Parathyroid PF01279.17 ORF135566 - 0.1 13.2 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 Parathyroid hormone family GRIN_C PF15235.6 ORF135566 - 0.22 11.7 0.1 0.27 11.4 0.1 1.1 1 0 0 1 1 1 0 G protein-regulated inducer of neurite outgrowth C-terminus DUF1706 PF08020.11 ORF135376 - 0.03 14.2 0.2 0.036 14.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1706) DUF2442 PF10387.9 ORF135376 - 0.1 12.9 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2442) NOD PF06816.13 ORF135183 - 0.021 14.5 0.2 0.03 14.0 0.2 1.2 1 0 0 1 1 1 0 NOTCH protein adh_short_C2 PF13561.6 ORF135138 - 1.2e-19 70.8 0.0 1.4e-19 70.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF135138 - 0.00021 20.8 0.0 0.0003 20.3 0.0 1.3 1 0 0 1 1 1 1 short chain dehydrogenase zf-C3HC4_2 PF13923.6 ORF134988 - 9e-07 28.6 11.8 9e-07 28.6 11.8 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF134988 - 0.00037 20.3 15.4 0.0014 18.5 15.4 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 ORF134988 - 0.00094 19.0 7.5 0.0013 18.6 7.5 1.2 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-RING_2 PF13639.6 ORF134988 - 0.0019 18.5 13.3 0.0019 18.5 13.3 1.6 1 1 0 1 1 1 1 Ring finger domain zf-Nse PF11789.8 ORF134988 - 0.089 12.6 8.7 0.12 12.2 8.7 1.2 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Siva PF05458.12 ORF134988 - 0.13 11.9 9.2 0.14 11.8 9.2 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) zf-C3HC4_3 PF13920.6 ORF134988 - 0.46 10.4 16.1 0.3 11.0 14.3 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF134988 - 0.85 9.8 15.6 1.4 9.2 15.6 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING IBR PF01485.21 ORF134988 - 4.5 7.6 16.3 2.8 8.2 10.6 2.2 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain SHIPPO-rpt PF07004.12 ORF134789 - 0.00053 20.8 3.9 0.047 14.6 3.6 2.3 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat DUF3301 PF11743.8 ORF134789 - 0.19 11.5 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) Trm112p PF03966.16 ORF133026 - 1.5e-05 25.5 0.4 2.9e-05 24.6 0.4 1.5 1 1 0 1 1 1 1 Trm112p-like protein TF_Zn_Ribbon PF08271.12 ORF133026 - 0.028 13.9 0.3 0.06 12.9 0.3 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_4 PF13717.6 ORF133026 - 0.062 13.2 1.0 0.093 12.7 0.0 1.7 2 0 0 2 2 2 0 zinc-ribbon domain MORN PF02493.20 ORF132498 - 1.2e-07 31.2 7.2 0.0007 19.3 1.0 4.1 4 0 0 4 4 4 2 MORN repeat Bactofilin PF04519.13 ORF132498 - 0.049 13.9 0.1 0.058 13.7 0.1 1.1 1 0 0 1 1 1 0 Polymer-forming cytoskeletal MtN3_slv PF03083.16 ORF132361 - 0.31 11.1 7.4 0.33 11.0 7.4 1.0 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange DUF3267 PF11667.8 ORF132361 - 0.32 11.3 7.5 0.39 11.0 7.5 1.1 1 0 0 1 1 1 0 Putative zincin peptidase SCAMP PF04144.13 ORF132361 - 3.2 8.0 9.2 5 7.4 6.9 1.8 1 1 1 2 2 2 0 SCAMP family OS-D PF03392.13 ORF131303 - 0.057 13.5 2.9 0.069 13.3 2.9 1.2 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D GPR15L PF15854.5 ORF131108 - 0.074 13.3 5.1 0.18 12.1 0.2 2.1 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 DUF1398 PF07166.11 ORF129813 - 0.03 14.4 0.6 0.031 14.3 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) WzyE PF06899.11 ORF129319 - 0.076 11.9 0.1 0.083 11.8 0.1 1.0 1 0 0 1 1 1 0 WzyE protein, O-antigen assembly polymerase CCDC53 PF10152.9 ORF129279 - 5 7.5 13.0 5.3 7.4 13.0 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex MafB19-deam PF14437.6 ORF128850 - 0.066 13.0 0.0 0.074 12.8 0.0 1.3 1 1 0 1 1 1 0 MafB19-like deaminase ETRAMP PF09716.10 ORF128182 - 0.14 12.2 0.1 0.2 11.8 0.1 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) EF-hand_7 PF13499.6 ORF128178 - 3.2e-09 37.1 0.2 5e-09 36.5 0.2 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF128178 - 1.2e-08 33.9 6.8 0.00082 18.7 0.1 3.4 3 1 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF128178 - 1.7e-06 27.8 5.5 0.0012 18.6 1.4 3.2 1 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF128178 - 4.7e-06 26.1 3.1 0.00032 20.4 0.1 3.0 2 1 0 2 2 2 1 EF-hand domain EF-hand_4 PF12763.7 ORF128178 - 0.012 15.5 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF128178 - 0.019 15.3 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain EF-hand_5 PF13202.6 ORF128178 - 0.07 12.7 10.2 3 7.5 0.0 4.0 2 2 1 3 3 3 0 EF hand NOD PF06816.13 ORF127879 - 0.021 14.5 0.2 0.03 14.0 0.2 1.2 1 0 0 1 1 1 0 NOTCH protein NOD PF06816.13 ORF127264 - 0.021 14.5 0.2 0.03 14.0 0.2 1.2 1 0 0 1 1 1 0 NOTCH protein COPI_assoc PF08507.10 ORF126987 - 0.44 10.6 8.5 0.051 13.6 3.7 1.7 1 1 1 2 2 2 0 COPI associated protein RMF PF04957.12 ORF12641 - 0.064 13.5 1.3 0.097 12.9 1.3 1.3 1 0 0 1 1 1 0 Ribosome modulation factor CLAG PF03805.13 ORF126076 - 0.029 12.0 0.2 0.036 11.6 0.2 1.0 1 0 0 1 1 1 0 Cytoadherence-linked asexual protein Leuk-A4-hydro_C PF09127.11 ORF126076 - 0.11 12.5 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Leukotriene A4 hydrolase, C-terminal Fumarate_red_C PF02300.17 ORF123872 - 0.0041 17.2 0.8 0.0048 17.0 0.8 1.1 1 0 0 1 1 1 1 Fumarate reductase subunit C Av_adeno_fibre PF06536.11 ORF123602 - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Avian adenovirus fibre, N-terminal OTCace PF00185.24 ORF123573 - 3.9e-21 75.7 0.1 4.4e-21 75.6 0.1 1.0 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E2 PF08199.11 ORF123117 - 0.0034 17.3 7.6 0.01 15.7 7.6 1.9 1 1 0 1 1 1 1 Bacteriophage E2-like protein DUF3781 PF12636.7 ORF12287 - 0.042 13.7 0.1 0.058 13.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) Pep1_7 PF17232.2 ORF122793 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF122793 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF122793 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF122793 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Acetyltransf_10 PF13673.7 ORF122618 - 2.9e-13 49.9 0.0 3.1e-13 49.8 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF122618 - 2.8e-10 40.5 0.0 3.5e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF122618 - 3.9e-08 33.5 0.0 5e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 ORF122618 - 2.5e-05 24.1 0.0 7.3e-05 22.7 0.0 1.6 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF122618 - 0.014 15.5 0.0 0.017 15.3 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF122618 - 0.016 15.3 0.0 0.021 14.9 0.0 1.3 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase Pfk_N PF18468.1 ORF122618 - 0.032 14.6 0.0 0.04 14.3 0.0 1.2 1 0 0 1 1 1 0 Phosphofructokinase N-terminal domain yeast PanZ PF12568.8 ORF122618 - 0.067 12.9 0.0 0.078 12.7 0.0 1.2 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ SAMP PF05924.11 ORF121959 - 0.035 13.4 0.0 0.063 12.6 0.0 1.4 1 0 0 1 1 1 0 SAMP Motif Abhydrolase_3 PF07859.13 ORF121207 - 0.19 11.6 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold PrmC_N PF17827.1 ORF12080 - 0.05 14.2 0.1 0.08 13.5 0.1 1.3 1 0 0 1 1 1 0 PrmC N-terminal domain ATLF PF07737.11 ORF12080 - 0.11 11.8 0.1 0.12 11.6 0.1 1.1 1 0 0 1 1 1 0 Anthrax toxin lethal factor, N- and C-terminal domain Tmpp129 PF10272.9 ORF120728 - 0.098 11.9 2.2 0.1 11.9 2.2 1.1 1 0 0 1 1 1 0 Putative transmembrane protein precursor PetN PF03742.14 ORF120540 - 0.076 12.9 1.1 0.18 11.7 1.1 1.7 1 0 0 1 1 1 0 PetN TMEM132D_C PF15706.5 ORF120540 - 0.12 12.2 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term VWC PF00093.18 ORF120528 - 0.033 14.5 4.0 0.049 13.9 4.0 1.3 1 0 0 1 1 1 0 von Willebrand factor type C domain Ribosomal_S13_N PF08069.12 ORF120142 - 0.74 9.9 4.2 0.29 11.2 0.8 2.1 1 1 1 2 2 2 0 Ribosomal S13/S15 N-terminal domain PP2C_2 PF13672.6 ORF119164 - 0.056 13.1 0.0 0.066 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein phosphatase 2C PTS_EIIB PF00367.20 ORF119164 - 0.3 10.6 0.3 0.3 10.6 0.3 1.9 2 0 0 2 2 2 0 phosphotransferase system, EIIB HlyIII PF03006.20 ORF118834 - 1.4e-17 64.2 0.9 1.6e-17 64.0 0.9 1.1 1 0 0 1 1 1 1 Haemolysin-III related Mlo PF03094.15 ORF118353 - 0.0097 14.3 1.3 0.011 14.1 1.3 1.0 1 0 0 1 1 1 1 Mlo family DUF5516 PF17637.2 ORF118166 - 0.11 12.2 0.4 0.31 10.8 0.4 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5516) DUF2528 PF10800.8 ORF118056 - 0.041 14.5 0.2 0.048 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2528) Caudo_bapla16 PF16792.5 ORF11730 - 0.097 11.7 0.4 0.1 11.6 0.4 1.0 1 0 0 1 1 1 0 Phage tail base-plate attachment protein of Caudovirales ORF16 DUF1128 PF06569.11 ORF11730 - 0.45 10.5 5.4 0.097 12.7 1.9 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1128) MCC-bdg_PDZ PF10506.9 ORF116351 - 0.081 13.0 0.0 0.12 12.5 0.0 1.3 1 1 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF2039 PF10217.9 ORF116027 - 0.015 15.6 7.0 0.069 13.5 5.7 2.2 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2039) CENP-B_N PF04218.13 ORF116027 - 0.077 12.6 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain TMEM72 PF16054.5 ORF11567 - 0.076 12.7 0.1 0.099 12.3 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein family 72 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks329.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks329.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks329.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks329.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Asp PF00026.23 ORF4387 - 3e-38 132.0 0.9 4.1e-38 131.6 0.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF4387 - 4.4e-07 29.8 0.0 9.1e-07 28.8 0.0 1.5 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF4387 - 0.00024 21.7 0.0 0.015 15.9 0.0 2.6 2 0 0 2 2 2 1 Aspartyl protease TAXi_N PF14543.6 ORF4387 - 0.0043 17.3 0.3 0.051 13.8 0.1 2.3 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal EphA2_TM PF14575.6 ORF4387 - 0.077 13.9 0.0 0.14 13.0 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ECSCR PF15820.5 ORF4387 - 0.11 12.3 0.3 0.24 11.3 0.3 1.6 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator gag-asp_proteas PF13975.6 ORF4387 - 0.12 13.0 0.0 0.88 10.2 0.0 2.3 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Aa_trans PF01490.18 ORF40004 - 5.3e-25 88.0 19.8 8.6e-25 87.3 19.8 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein ETRAMP PF09716.10 ORF40004 - 0.012 15.6 0.2 0.062 13.4 0.0 2.3 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) DNA_ligase_A_C PF04679.15 ORF39882 - 8e-15 55.2 0.1 2.4e-14 53.7 0.0 1.8 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region DNA_ligase_IV PF11411.8 ORF39882 - 2.2e-05 24.5 0.0 5.1e-05 23.3 0.0 1.7 1 0 0 1 1 1 1 DNA ligase IV BRCT_2 PF16589.5 ORF39882 - 4.6e-05 23.7 0.0 8.2e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain DNA_ligase_A_M PF01068.21 ORF39882 - 0.0043 16.7 0.2 0.0067 16.1 0.2 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain FHA PF00498.26 ORF29430 - 8.4e-14 51.7 0.3 3.3e-12 46.6 0.2 2.6 2 0 0 2 2 2 1 FHA domain RINGv PF12906.7 ORF29430 - 5.1e-11 42.5 9.2 1.3e-10 41.2 9.2 1.8 1 1 0 1 1 1 1 RING-variant domain Yop-YscD_cpl PF16697.5 ORF29430 - 1.7e-08 34.6 0.0 3.6e-06 27.2 0.0 2.4 2 0 0 2 2 2 2 Inner membrane component of T3SS, cytoplasmic domain VGPC1_C PF16799.5 ORF27193 - 0.011 15.7 1.1 0.035 14.1 1.1 1.9 1 0 0 1 1 1 0 C-terminal membrane-localisation domain of ion-channel, VCN1 Exonuc_VII_L PF02601.15 ORF27193 - 0.066 12.8 4.6 0.1 12.2 4.6 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit CDC45 PF02724.14 ORF27193 - 0.11 10.7 9.8 0.15 10.3 9.8 1.3 1 0 0 1 1 1 0 CDC45-like protein Peptidase_A3 PF02160.15 ORF27193 - 0.19 11.2 3.9 0.29 10.6 3.9 1.2 1 0 0 1 1 1 0 Cauliflower mosaic virus peptidase (A3) TFIIA PF03153.13 ORF27193 - 0.34 10.8 14.5 0.53 10.2 14.5 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit MAS20 PF02064.15 ORF27193 - 1.4 9.0 9.0 3.1 7.9 9.0 1.5 1 0 0 1 1 1 0 MAS20 protein import receptor GntP_permease PF02447.16 ORF20318 - 3.2e-164 546.8 39.3 3.5e-164 546.7 39.3 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 ORF20318 - 1e-16 61.0 34.3 1.8e-16 60.3 34.3 1.4 1 0 0 1 1 1 1 Citrate transporter Na_H_antiport_2 PF13726.6 ORF20318 - 0.00025 21.1 4.7 0.00025 21.1 4.7 3.0 3 1 1 4 4 4 1 Na+-H+ antiporter family DUF4017 PF13209.6 ORF20318 - 6.4 6.8 7.4 2.2 8.3 0.4 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF4017) ATP-grasp_3 PF02655.14 ORF14385 - 1.7e-06 28.2 0.0 5.1e-06 26.6 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain PGM1_C PF18105.1 ORF14385 - 0.0034 16.8 0.0 0.0086 15.6 0.0 1.7 1 0 0 1 1 1 1 PGM1 C-terminal domain PhyH PF05721.13 ORF140116 - 6e-08 33.2 0.0 1.5e-07 31.9 0.0 1.7 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Asp PF00026.23 ORF139701 - 3e-38 132.0 0.9 4.1e-38 131.6 0.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF139701 - 4.4e-07 29.8 0.0 9.1e-07 28.8 0.0 1.5 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF139701 - 0.00024 21.7 0.0 0.015 15.9 0.0 2.6 2 0 0 2 2 2 1 Aspartyl protease TAXi_N PF14543.6 ORF139701 - 0.0043 17.3 0.3 0.051 13.8 0.1 2.3 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal EphA2_TM PF14575.6 ORF139701 - 0.077 13.9 0.0 0.14 13.0 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ECSCR PF15820.5 ORF139701 - 0.11 12.3 0.3 0.24 11.3 0.3 1.6 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator gag-asp_proteas PF13975.6 ORF139701 - 0.12 13.0 0.0 0.88 10.2 0.0 2.3 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease FMO-like PF00743.19 ORF137173 - 3.4e-43 147.9 1.4 1e-30 106.7 1.4 2.7 1 1 1 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF137173 - 1.7e-12 47.3 0.0 6.7e-10 38.7 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF137173 - 4.2e-09 36.0 0.0 4e-07 29.5 0.0 2.8 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 ORF137173 - 2.1e-08 33.8 0.0 7.7e-08 31.9 0.0 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF137173 - 5.2e-08 32.9 0.0 0.00014 21.6 0.0 2.9 3 0 0 3 3 3 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF137173 - 7.7e-08 32.5 0.0 1.5e-07 31.5 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 ORF137173 - 0.00043 19.7 0.0 0.02 14.2 0.0 2.1 1 1 0 2 2 2 1 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 ORF137173 - 0.00064 19.7 0.0 0.0065 16.5 0.0 2.4 3 0 0 3 3 3 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF137173 - 0.0032 16.2 0.0 0.0048 15.7 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein Thi4 PF01946.17 ORF137173 - 0.0042 16.4 0.0 0.013 14.7 0.0 1.7 2 0 0 2 2 2 1 Thi4 family Pyr_redox PF00070.27 ORF137173 - 0.019 15.5 0.1 0.15 12.6 0.0 2.4 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF137173 - 0.024 13.7 0.0 0.034 13.2 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain CAP_C PF08603.11 ORF132328 - 7.5e-36 123.1 6.2 1.1e-35 122.5 6.2 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) C terminal CAP_N PF01213.19 ORF132328 - 3.9e-20 72.6 0.0 5e-20 72.2 0.0 1.1 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal TBCC PF07986.12 ORF132328 - 7.2e-09 35.4 4.3 1.2e-08 34.7 4.3 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C NIF PF03031.18 ORF1201 - 9.1e-54 181.5 0.6 1.4e-53 180.8 0.6 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase RCC1 PF00415.18 ORF116309 - 2.9e-41 139.9 13.8 3.4e-09 37.2 0.0 7.3 7 1 0 7 7 7 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF116309 - 4.6e-13 48.6 36.3 0.00017 21.3 0.8 7.4 7 1 0 7 7 7 5 Regulator of chromosome condensation (RCC1) repeat NICE-1 PF15845.5 ORF116309 - 2.8 8.8 8.4 3.5 8.5 0.1 3.3 3 0 0 3 3 3 0 Cysteine-rich C-terminal 1 family GTP_EFTU PF00009.27 ORF114857 - 1.4e-55 187.9 0.2 2e-55 187.4 0.2 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF114857 - 5e-23 81.5 0.0 9.7e-23 80.6 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF114857 - 7e-14 52.0 2.0 1e-13 51.4 0.8 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF114857 - 4.5e-05 23.5 0.1 8.2e-05 22.7 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase cobW PF02492.19 ORF114857 - 0.0091 15.6 0.0 0.026 14.1 0.0 1.7 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 ORF114857 - 0.035 14.0 0.0 0.074 13.0 0.0 1.5 2 0 0 2 2 2 0 RsgA GTPase Glyco_hydro_7 PF00840.20 ORF107319 - 2.2e-10 39.9 1.4 9.4e-05 21.3 0.0 5.0 2 2 2 4 4 4 3 Glycosyl hydrolase family 7 Somatomedin_B PF01033.17 ORF107319 - 1.1e-05 25.7 47.3 0.0007 19.9 19.6 4.2 3 2 1 4 4 4 2 Somatomedin B domain DUF2070 PF09843.9 ORF106969 - 0.0071 14.7 0.4 0.01 14.2 0.4 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) CAP_C PF08603.11 ORF106873 - 7.5e-36 123.1 6.2 1.1e-35 122.5 6.2 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) C terminal CAP_N PF01213.19 ORF106873 - 3.9e-20 72.6 0.0 5e-20 72.2 0.0 1.1 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal TBCC PF07986.12 ORF106873 - 7.2e-09 35.4 4.3 1.2e-08 34.7 4.3 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C Asp PF00026.23 ORF105595 - 3e-38 132.0 0.9 4.1e-38 131.6 0.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF105595 - 4.4e-07 29.8 0.0 9.1e-07 28.8 0.0 1.5 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF105595 - 0.00024 21.7 0.0 0.015 15.9 0.0 2.6 2 0 0 2 2 2 1 Aspartyl protease TAXi_N PF14543.6 ORF105595 - 0.0043 17.3 0.3 0.051 13.8 0.1 2.3 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal EphA2_TM PF14575.6 ORF105595 - 0.077 13.9 0.0 0.14 13.0 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain ECSCR PF15820.5 ORF105595 - 0.11 12.3 0.3 0.24 11.3 0.3 1.6 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator gag-asp_proteas PF13975.6 ORF105595 - 0.12 13.0 0.0 0.88 10.2 0.0 2.3 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease Peptidase_S74 PF13884.6 NODE_11940_length_1275_cov_13.437097_g8885_i0forward_frame_2 - 4.8e-08 33.2 0.0 8.7e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Chaperone of endosialidase CRAL_TRIO PF00650.20 ORF88289 - 2.5e-36 124.8 1.3 3e-36 124.5 0.5 1.5 2 0 0 2 2 2 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF88289 - 4.3e-07 30.0 4.8 1.7e-06 28.1 0.6 3.1 3 0 0 3 3 3 1 CRAL/TRIO, N-terminal domain CRAL_TRIO_2 PF13716.6 ORF88289 - 0.041 14.0 0.0 0.083 13.0 0.0 1.5 1 1 0 1 1 1 0 Divergent CRAL/TRIO domain Hepar_II_III PF07940.13 ORF87570 - 0.024 14.2 0.0 0.043 13.4 0.0 1.3 1 0 0 1 1 1 0 Heparinase II/III-like protein DUF1687 PF07955.11 ORF87570 - 0.18 12.3 0.2 0.32 11.5 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1687) Sulfotransfer_1 PF00685.27 ORF83886 - 1e-16 61.3 1.0 1.2e-15 57.8 1.0 2.2 1 1 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF83886 - 9.9e-10 39.2 0.2 5.1e-09 36.8 0.2 2.0 1 1 0 1 1 1 1 Sulfotransferase family gpD PF02925.16 ORF82365 - 4.5 7.3 5.3 13 5.8 0.2 2.7 3 0 0 3 3 3 0 Bacteriophage scaffolding protein D Ank_2 PF12796.7 ORF75577 - 1.2e-59 198.8 8.2 2.5e-14 53.6 0.2 5.9 1 1 5 6 6 6 6 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF75577 - 1.1e-58 194.9 10.1 1.5e-09 38.2 0.1 9.7 6 2 4 10 10 10 9 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF75577 - 2e-41 139.5 13.2 3.8e-08 33.4 0.0 8.8 4 3 6 10 10 10 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF75577 - 7.8e-39 127.3 9.2 0.0027 18.1 0.0 12.7 13 0 0 13 13 13 7 Ankyrin repeat Ank PF00023.30 ORF75577 - 1.2e-36 123.6 18.3 0.0024 18.3 0.0 11.8 9 3 2 11 11 11 10 Ankyrin repeat DUF4398 PF14346.6 ORF75577 - 0.0051 17.4 0.8 1.7 9.3 0.9 3.6 3 0 0 3 3 3 1 Domain of unknown function (DUF4398) DBD_Tnp_Hermes PF10683.9 ORF75577 - 0.051 13.3 0.0 61 3.4 0.0 4.0 4 0 0 4 4 4 0 Hermes transposase DNA-binding domain Acetyltransf_3 PF13302.7 ORF74285 - 0.0027 18.4 0.0 0.0051 17.5 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain gpD PF02925.16 ORF73643 - 4.5 7.3 5.3 13 5.8 0.2 2.7 3 0 0 3 3 3 0 Bacteriophage scaffolding protein D TRP PF06011.12 ORF7144 - 0.00036 19.4 23.7 0.013 14.2 23.7 2.0 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel LapA_dom PF06305.11 ORF7144 - 0.82 9.5 4.4 0.87 9.4 0.0 2.9 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain DUF1298 PF06974.13 ORF62954 - 2.1e-15 57.0 0.0 4e-15 56.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) BACK PF07707.15 ORF62954 - 0.023 14.8 0.3 1.3 9.2 0.1 2.6 2 0 0 2 2 2 0 BTB And C-terminal Kelch LRR_4 PF12799.7 ORF62954 - 0.1 13.1 0.0 7.6 7.1 0.0 2.5 2 0 0 2 2 2 0 Leucine Rich repeats (2 copies) GAS PF13851.6 ORF62577 - 0.00011 21.6 41.4 0.13 11.6 8.4 4.0 2 1 1 3 3 3 3 Growth-arrest specific micro-tubule binding bZIP_1 PF00170.21 ORF62577 - 0.0027 17.8 36.8 0.0062 16.6 0.1 6.3 4 2 1 6 6 6 2 bZIP transcription factor Spc7 PF08317.11 ORF62577 - 0.0084 15.0 34.2 0.03 13.2 3.7 3.2 3 0 0 3 3 3 2 Spc7 kinetochore protein TMF_DNA_bd PF12329.8 ORF62577 - 0.012 15.6 0.1 0.012 15.6 0.1 4.9 4 2 1 5 5 5 0 TATA element modulatory factor 1 DNA binding ZapB PF06005.12 ORF62577 - 0.012 16.0 5.6 0.012 16.0 5.6 5.7 5 1 0 5 5 4 0 Cell division protein ZapB TMF_TATA_bd PF12325.8 ORF62577 - 0.031 14.5 34.5 0.12 12.6 3.9 4.4 2 1 2 4 4 4 0 TATA element modulatory factor 1 TATA binding GOLGA2L5 PF15070.6 ORF62577 - 0.052 12.2 30.0 0.16 10.6 18.9 2.9 1 1 0 2 2 2 0 Putative golgin subfamily A member 2-like protein 5 CorA PF01544.18 ORF62577 - 0.053 12.8 27.8 0.014 14.7 4.1 2.9 2 1 1 3 3 3 0 CorA-like Mg2+ transporter protein bZIP_2 PF07716.15 ORF62577 - 0.053 13.6 0.1 0.053 13.6 0.1 6.4 4 2 3 7 7 7 0 Basic region leucine zipper Tweety PF04906.13 ORF62577 - 0.15 10.7 5.1 2.4 6.7 1.0 2.4 2 1 0 2 2 2 0 Tweety Fez1 PF06818.15 ORF62577 - 0.17 12.3 35.0 0.11 13.0 7.2 3.3 2 1 0 2 2 2 0 Fez1 KASH_CCD PF14662.6 ORF62577 - 0.2 11.4 42.5 2 8.2 12.2 3.7 1 1 3 4 4 4 0 Coiled-coil region of CCDC155 or KASH Pox_A_type_inc PF04508.12 ORF62577 - 0.23 11.4 0.2 0.23 11.4 0.2 3.8 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat HAP1_N PF04849.13 ORF62577 - 0.33 10.1 39.0 0.056 12.6 19.6 2.9 1 1 1 2 2 2 0 HAP1 N-terminal conserved region ADIP PF11559.8 ORF62577 - 0.36 10.9 36.0 2.3 8.3 5.3 4.1 2 1 2 4 4 4 0 Afadin- and alpha -actinin-Binding CCCAP PF15964.5 ORF62577 - 0.57 8.4 31.7 0.054 11.8 7.8 3.2 1 1 1 3 3 3 0 Centrosomal colon cancer autoantigen protein family CENP-F_leu_zip PF10473.9 ORF62577 - 0.58 10.2 49.6 0.11 12.5 16.6 4.6 4 1 1 5 5 5 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Lebercilin PF15619.6 ORF62577 - 1.7 8.3 34.8 1 9.0 4.6 4.3 2 1 2 4 4 4 0 Ciliary protein causing Leber congenital amaurosis disease DUF724 PF05266.14 ORF62577 - 2.1 8.1 31.4 0.43 10.4 10.6 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF724) Mto2_bdg PF12808.7 ORF62577 - 3.4 8.0 19.0 0.83 10.0 0.1 4.7 5 1 1 6 6 6 0 Micro-tubular organiser Mto1 C-term Mto2-binding region SlyX PF04102.12 ORF62577 - 4.1 8.1 20.0 17 6.1 0.1 6.0 3 2 3 6 6 6 0 SlyX MAD PF05557.13 ORF62577 - 4.4 5.5 40.9 1.4 7.2 5.1 3.4 1 1 2 3 3 3 0 Mitotic checkpoint protein EMP24_GP25L PF01105.24 ORF62577 - 5.4 6.9 21.3 0.94 9.4 4.2 3.1 4 0 0 4 4 4 0 emp24/gp25L/p24 family/GOLD TPR_MLP1_2 PF07926.12 ORF62577 - 6.3 6.9 39.1 0.6 10.2 3.2 4.6 3 1 2 5 5 4 0 TPR/MLP1/MLP2-like protein GA PF01468.17 ORF62577 - 9.8 6.5 8.7 7.5 6.9 0.3 3.2 3 0 0 3 3 3 0 GA module Comm PF15957.5 ORF58524 - 8 6.8 11.7 3.3 8.1 0.1 3.4 3 0 0 3 3 3 0 Commissureless DUF4328 PF14219.6 ORF5391 - 0.0032 17.1 3.4 0.0032 17.1 3.4 2.7 3 0 0 3 3 3 1 Domain of unknown function (DUF4328) DUF4131 PF13567.6 ORF5391 - 0.015 15.0 5.3 1.2 8.8 0.2 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) FtsX PF02687.21 ORF5391 - 0.95 10.0 8.6 16 6.1 2.1 3.4 2 1 0 2 2 2 0 FtsX-like permease family TRP PF06011.12 ORF5280 - 0.00076 18.3 20.4 0.031 13.0 20.4 2.1 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel Abhydrolase_1 PF00561.20 ORF44858 - 2e-20 73.5 0.1 2e-13 50.6 0.1 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF44858 - 8.8e-17 62.4 1.5 8.8e-17 62.4 1.5 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF44858 - 4.2e-14 52.4 0.0 4.4e-13 49.1 0.0 2.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF44858 - 0.0014 18.7 0.0 0.003 17.7 0.0 1.5 1 0 0 1 1 1 1 TAP-like protein BAAT_C PF08840.11 ORF44858 - 0.0019 18.2 0.0 0.0068 16.3 0.0 1.9 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.18 ORF44858 - 0.0022 17.6 0.0 0.043 13.4 0.0 2.2 2 0 0 2 2 2 1 Dienelactone hydrolase family Esterase PF00756.20 ORF44858 - 0.0035 17.0 0.0 0.0072 16.0 0.0 1.5 1 0 0 1 1 1 1 Putative esterase Abhydrolase_2 PF02230.16 ORF44858 - 0.0038 17.1 0.0 0.012 15.4 0.0 1.8 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Thioesterase PF00975.20 ORF44858 - 0.018 15.2 0.1 0.82 9.7 0.0 2.1 2 0 0 2 2 2 0 Thioesterase domain Sdh_cyt PF01127.22 ORF44858 - 0.032 14.3 0.1 0.15 12.1 0.1 2.1 1 1 1 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AXE1 PF05448.12 ORF44858 - 0.049 12.3 0.0 1.8 7.2 0.1 2.5 2 1 0 2 2 2 0 Acetyl xylan esterase (AXE1) Esterase_phd PF10503.9 ORF44858 - 0.12 11.9 0.0 0.29 10.6 0.0 1.6 1 0 0 1 1 1 0 Esterase PHB depolymerase TRP PF06011.12 ORF43915 - 0.00098 18.0 20.4 0.04 12.6 20.4 2.1 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel FYDLN_acid PF09538.10 ORF43915 - 0.53 11.0 5.8 0.84 10.4 5.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) LRR19-TM PF15176.6 ORF43915 - 0.7 9.9 0.0 0.7 9.9 0.0 3.2 3 1 1 4 4 4 0 Leucine-rich repeat family 19 TM domain Raftlin PF15250.6 ORF43915 - 1.3 7.7 5.6 1.8 7.2 5.6 1.1 1 0 0 1 1 1 0 Raftlin SAC3_GANP PF03399.16 ORF40099 - 2.7e-12 46.7 0.7 2.3e-10 40.4 0.7 2.5 1 1 0 1 1 1 1 SAC3/GANP family gpD PF02925.16 ORF38833 - 4.5 7.3 5.3 13 5.8 0.2 2.7 3 0 0 3 3 3 0 Bacteriophage scaffolding protein D HEAT PF02985.22 ORF32531 - 5.5e-07 29.3 0.0 0.076 13.3 0.0 3.3 3 0 0 3 3 3 2 HEAT repeat Cnd1 PF12717.7 ORF32531 - 0.00015 21.9 0.7 0.0048 17.0 0.1 2.8 2 0 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 ORF32531 - 0.0063 17.0 0.0 0.062 13.8 0.0 2.5 1 1 1 2 2 2 1 HEAT-like repeat HEAT_2 PF13646.6 ORF32531 - 0.0079 16.6 0.0 0.065 13.6 0.0 2.4 2 0 0 2 2 2 1 HEAT repeats Arm PF00514.23 ORF32531 - 0.01 15.9 0.0 59 3.9 0.0 4.6 5 0 0 5 5 5 0 Armadillo/beta-catenin-like repeat DUF3361 PF11841.8 ORF32531 - 0.14 12.1 0.8 0.7 9.8 0.2 2.5 2 2 0 2 2 2 0 Domain of unknown function (DUF3361) DUF2838 PF10998.8 ORF28231 - 7.4e-26 90.6 5.2 7.4e-26 90.6 5.2 3.1 3 0 0 3 3 3 1 Protein of unknown function (DUF2838) CdvA PF18822.1 ORF28231 - 0.013 15.3 8.6 0.15 11.8 4.8 2.5 2 1 0 2 2 2 0 CdvA-like coiled-coil domain DUF677 PF05055.12 ORF28231 - 0.034 13.0 2.0 0.35 9.7 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF677) IFT57 PF10498.9 ORF28231 - 0.068 12.1 6.6 0.052 12.5 2.8 2.0 2 0 0 2 2 2 0 Intra-flagellar transport protein 57 Apolipoprotein PF01442.18 ORF28231 - 0.081 12.8 1.1 1 9.2 0.3 2.1 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF28231 - 0.12 12.4 1.9 0.77 9.8 0.2 2.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DLP_helical PF18709.1 ORF28231 - 0.19 10.9 5.6 0.39 9.9 2.7 2.0 2 0 0 2 2 2 0 Dynamin-like helical domain ApoLp-III PF07464.11 ORF28231 - 0.3 11.2 6.4 0.36 10.9 4.1 2.0 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DUF883 PF05957.13 ORF28231 - 0.44 11.2 2.1 4.5 8.0 1.2 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) HSP70 PF00012.20 ORF28231 - 0.51 8.5 5.7 3.1 5.9 3.0 2.0 2 0 0 2 2 2 0 Hsp70 protein DUF1640 PF07798.11 ORF28231 - 1.3 9.0 7.9 3.3 7.7 4.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1640) Asp PF00026.23 ORF27988 - 7.4e-34 117.6 3.4 1e-33 117.1 3.4 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF27988 - 1.6e-16 61.1 1.7 3.3e-16 60.0 1.7 1.5 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF27988 - 6.7e-13 48.7 0.0 2.5e-12 46.9 0.0 1.9 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF27988 - 0.0099 16.5 0.0 1 10.0 0.0 2.4 2 0 0 2 2 2 1 Aspartyl protease gag-asp_proteas PF13975.6 ORF27988 - 0.013 16.0 0.0 0.12 12.9 0.0 2.2 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease His_Phos_2 PF00328.22 ORF26147 - 5.4e-06 26.0 0.0 0.0021 17.4 0.0 2.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) Dpy-30 PF05186.13 ORF24521 - 1.5e-05 24.6 0.0 5.1e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 Dpy-30 motif Comm PF15957.5 ORF143637 - 6.3 7.2 11.3 3.3 8.1 0.1 3.4 3 0 0 3 3 3 0 Commissureless Cullin PF00888.22 ORF131925 - 2.4e-31 109.0 13.1 2.4e-31 109.0 13.1 2.1 1 1 1 2 2 2 1 Cullin family FAM25 PF15825.5 ORF131925 - 0.1 12.9 0.6 4.8 7.6 0.2 2.6 2 0 0 2 2 2 0 FAM25 family Thg1 PF04446.12 ORF131925 - 0.16 12.0 0.0 0.16 12.0 0.0 2.8 3 1 0 3 3 3 0 tRNAHis guanylyltransferase SIT PF15330.6 ORF130063 - 2.4 8.6 6.0 1.3 9.5 2.1 2.2 1 1 1 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT T2SSE PF00437.20 ORF12075 - 0.00062 18.9 0.1 0.039 13.0 0.0 2.3 2 0 0 2 2 2 1 Type II/IV secretion system protein Rhodanese PF00581.20 ORF12075 - 0.0032 17.9 0.0 0.022 15.3 0.0 2.3 1 1 0 1 1 1 1 Rhodanese-like domain AAA_16 PF13191.6 ORF12075 - 0.02 15.3 1.1 0.056 13.8 0.3 2.1 2 1 0 2 2 2 0 AAA ATPase domain DUF3333 PF11812.8 ORF12075 - 0.081 13.1 0.0 0.23 11.6 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3333) AAA_19 PF13245.6 ORF12075 - 0.085 13.2 0.9 2.9 8.2 0.3 2.2 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.6 ORF12075 - 0.09 13.1 0.0 0.21 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF12075 - 0.12 12.9 0.3 0.37 11.3 0.2 1.9 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF12075 - 0.13 12.7 0.0 0.24 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain tRNA-synt_2 PF00152.20 ORF106485 - 1.7e-81 273.8 0.0 1.9e-81 273.5 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF106485 - 0.00019 21.0 0.1 0.0023 17.5 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) F_bP_aldolase PF01116.20 ORF106485 - 0.042 13.3 0.0 0.068 12.6 0.0 1.2 1 0 0 1 1 1 0 Fructose-bisphosphate aldolase class-II gpD PF02925.16 ORF105845 - 4.5 7.3 5.3 13 5.8 0.2 2.7 3 0 0 3 3 3 0 Bacteriophage scaffolding protein D Cadherin-like PF12733.7 ORF105586 - 0.0012 19.4 0.0 0.32 11.5 0.1 3.1 2 2 0 2 2 2 2 Cadherin-like beta sandwich domain Ion_trans PF00520.31 ORF104861 - 3.3e-10 39.6 30.1 3.1e-09 36.4 27.5 2.7 2 1 0 2 2 2 1 Ion transport protein Pho86 PF11124.8 ORF104861 - 0.017 14.6 13.7 1.1 8.6 0.2 3.1 3 0 0 3 3 3 0 Inorganic phosphate transporter Pho86 NPCC PF08058.11 ORF104861 - 0.021 14.9 1.0 0.021 14.9 1.0 2.4 2 0 0 2 2 2 0 Nuclear pore complex component Brr6_like_C_C PF10104.9 ORF104861 - 1.7 8.5 11.1 5.9 6.7 3.1 3.0 2 0 0 2 2 2 0 Di-sulfide bridge nucleocytoplasmic transport domain Pkinase PF00069.25 ORF10239 - 1.8e-67 227.5 0.0 2.2e-67 227.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF10239 - 5.4e-30 104.5 0.0 3.6e-29 101.9 0.0 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF10239 - 2.3e-05 23.9 0.0 4e-05 23.1 0.0 1.6 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 ORF10239 - 0.0026 17.1 0.2 0.0046 16.3 0.2 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF10239 - 0.0029 17.2 0.5 0.034 13.8 0.1 2.3 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Pox_ser-thr_kin PF05445.11 ORF10239 - 0.031 13.3 0.1 0.054 12.5 0.1 1.3 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF10239 - 0.12 11.1 0.1 0.2 10.4 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase DDE_3 PF13358.6 ORF101276 - 0.0043 16.8 0.0 0.0099 15.6 0.0 1.6 1 0 0 1 1 1 1 DDE superfamily endonuclease RNA12 PF10443.9 ORF101276 - 0.088 11.5 0.0 0.16 10.7 0.0 1.3 1 0 0 1 1 1 0 RNA12 protein DUF229 PF02995.17 ORF92661 - 2.2e-27 95.8 14.0 5.4e-20 71.5 3.0 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF92661 - 7e-11 42.1 2.9 1.6e-08 34.3 2.9 2.1 1 1 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF92661 - 0.011 15.4 0.0 0.02 14.5 0.0 1.4 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF835 PF05763.12 ORF92661 - 0.053 13.2 0.4 0.14 11.9 0.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF835) Abhydrolase_2 PF02230.16 ORF79960 - 0.00042 20.2 0.0 0.018 14.8 0.0 2.2 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF79960 - 0.002 18.7 1.7 0.0078 16.8 1.7 2.0 1 1 0 1 1 1 1 Alpha/beta hydrolase family DUF2249 PF10006.9 ORF79960 - 0.036 13.9 0.0 18 5.3 0.0 2.9 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2249) Cutinase PF01083.22 ORF79960 - 0.071 13.1 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Cutinase COesterase PF00135.28 ORF7610 - 4.3e-17 62.2 0.4 2e-16 60.0 0.4 1.8 1 1 0 1 1 1 1 Carboxylesterase family Abhydrolase_3 PF07859.13 ORF7610 - 2.2e-13 50.5 0.2 4.2e-13 49.7 0.1 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 ORF7610 - 6.9e-07 29.0 0.1 0.00082 18.9 0.0 2.3 2 0 0 2 2 2 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF7610 - 0.013 14.8 0.5 0.89 8.8 0.1 2.3 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 ORF7610 - 0.035 13.9 0.0 0.67 9.7 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Ank_2 PF12796.7 ORF64932 - 3.2e-30 104.6 0.3 3e-11 43.7 0.1 3.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF64932 - 1.3e-22 79.9 0.9 1e-07 32.4 0.0 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF64932 - 2.3e-20 72.4 1.6 6.5e-06 26.3 0.1 4.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF64932 - 1.1e-18 65.3 0.7 0.038 14.5 0.0 5.6 5 0 0 5 5 5 5 Ankyrin repeat Ank PF00023.30 ORF64932 - 1.6e-17 63.1 3.2 0.0028 18.0 0.0 5.4 5 0 0 5 5 5 4 Ankyrin repeat Pkinase PF00069.25 ORF62110 - 4e-46 157.5 2.7 7.6e-46 156.6 0.2 2.2 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62110 - 3.2e-33 115.1 0.0 5.2e-33 114.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF62110 - 1.3e-07 31.2 0.0 2.9e-07 30.1 0.0 1.6 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF62110 - 0.00083 18.2 0.0 0.00083 18.2 0.0 1.9 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF62110 - 0.066 12.6 0.0 0.16 11.3 0.0 1.6 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF62110 - 0.11 12.4 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4473 PF14747.6 ORF59621 - 0.074 13.6 0.2 0.17 12.4 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) Pkinase PF00069.25 ORF58921 - 4e-46 157.5 2.7 7.6e-46 156.6 0.2 2.2 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58921 - 3.2e-33 115.1 0.0 5.2e-33 114.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF58921 - 1.3e-07 31.2 0.0 2.9e-07 30.1 0.0 1.6 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF58921 - 0.00083 18.2 0.0 0.00083 18.2 0.0 1.9 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF58921 - 0.066 12.6 0.0 0.16 11.3 0.0 1.6 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF58921 - 0.11 12.4 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family MDD_C PF18376.1 ORF48184 - 3.2e-54 183.5 1.6 6.1e-54 182.6 1.6 1.5 1 0 0 1 1 1 1 Mevalonate 5-diphosphate decarboxylase C-terminal domain GHMP_kinases_N PF00288.26 ORF48184 - 7e-06 26.2 1.5 2e-05 24.7 1.5 1.8 1 0 0 1 1 1 1 GHMP kinases N terminal domain Aa_trans PF01490.18 ORF3992 - 7.1e-32 110.6 30.1 8.5e-32 110.4 30.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF1254 PF06863.12 ORF29055 - 2.1e-25 89.3 0.1 1.7e-24 86.4 0.0 2.2 2 1 1 3 3 3 1 Protein of unknown function (DUF1254) DUF1214 PF06742.11 ORF29055 - 8.4e-23 80.9 0.0 1.9e-22 79.8 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1214) DM13 PF10517.9 ORF29055 - 0.12 13.0 0.0 0.24 12.0 0.0 1.5 1 0 0 1 1 1 0 Electron transfer DM13 SHOCT PF09851.9 ORF24016 - 0.0003 20.4 1.8 0.00076 19.1 1.8 1.7 1 0 0 1 1 1 1 Short C-terminal domain GrpE PF01025.19 ORF24016 - 1.4 8.6 6.7 0.76 9.4 4.0 1.9 2 0 0 2 2 2 0 GrpE MFS_1 PF07690.16 ORF18280 - 9.7e-44 149.7 37.7 9.7e-44 149.7 37.7 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF18280 - 1.1e-12 47.6 6.0 1.1e-12 47.6 6.0 2.7 2 1 0 2 2 2 1 Sugar (and other) transporter TRI12 PF06609.13 ORF18280 - 5.6e-07 28.4 3.3 5.6e-07 28.4 3.3 1.8 1 1 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) CLN3 PF02487.17 ORF18280 - 4.7e-06 25.9 9.9 7.6e-05 21.9 6.2 2.5 3 0 0 3 3 3 2 CLN3 protein DUF3652 PF12372.8 ORF18280 - 0.011 15.6 0.2 4.4 7.3 0.1 2.5 2 0 0 2 2 2 0 Huntingtin protein region MFS_1_like PF12832.7 ORF18280 - 0.18 10.6 12.4 0.056 12.3 0.2 3.0 2 1 1 3 3 3 0 MFS_1 like family MFS_4 PF06779.14 ORF18280 - 0.26 10.6 31.0 0.75 9.0 26.6 2.6 1 1 1 2 2 2 0 Uncharacterised MFS-type transporter YbfB DUF3382 PF11862.8 ORF18280 - 1.9 8.8 12.8 0.99 9.7 0.2 4.5 2 2 2 5 5 5 0 Domain of unknown function (DUF3382) FAD_binding_2 PF00890.24 ORF1597 - 3.9e-68 230.5 1.4 2.2e-67 228.0 0.4 2.0 2 0 0 2 2 2 1 FAD binding domain Succ_DH_flav_C PF02910.20 ORF1597 - 1.3e-38 131.9 1.0 1.9e-38 131.3 1.0 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Peptidase_S10 PF00450.22 ORF152189 - 7.4e-99 332.0 0.3 9.3e-99 331.7 0.3 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase ScsC_N PF18312.1 ORF152189 - 0.44 10.4 1.8 3.8 7.4 0.1 2.4 2 0 0 2 2 2 0 Copper resistance protein ScsC N-terminal domain Dickkopf_N PF04706.12 ORF146086 - 0.00014 22.3 11.3 0.00014 22.3 11.3 4.6 3 1 0 3 3 3 1 Dickkopf N-terminal cysteine-rich region FAD_binding_2 PF00890.24 ORF144639 - 3.9e-68 230.5 1.4 2.2e-67 228.0 0.4 2.0 2 0 0 2 2 2 1 FAD binding domain Succ_DH_flav_C PF02910.20 ORF144639 - 1.3e-38 131.9 1.0 1.9e-38 131.3 1.0 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term CRAL_TRIO PF00650.20 ORF132435 - 1.9e-35 121.9 0.2 3e-35 121.3 0.2 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF132435 - 2.4e-05 24.4 0.3 6.4e-05 23.1 0.3 1.7 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain WYL PF13280.6 ORF118997 - 0.077 13.0 2.7 0.17 11.9 2.7 1.5 1 0 0 1 1 1 0 WYL domain FlaC_arch PF05377.11 ORF118997 - 0.42 11.1 3.1 0.8 10.1 0.1 2.4 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DivIVA PF05103.13 ORF118997 - 5.5 7.1 15.6 11 6.1 13.8 2.3 1 1 1 2 2 2 0 DivIVA protein Kelch_4 PF13418.6 ORF11608 - 1.3e-18 66.7 0.0 0.0003 20.7 0.0 5.9 5 2 1 6 6 6 3 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF11608 - 8e-17 61.1 0.0 1.6e-05 25.1 0.0 5.7 5 0 0 5 5 5 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF11608 - 4.8e-15 55.2 0.0 2.8e-05 24.0 0.0 5.8 6 0 0 6 6 6 2 Kelch motif Kelch_6 PF13964.6 ORF11608 - 2.6e-08 33.9 1.1 0.034 14.4 0.0 5.2 5 1 1 6 6 6 2 Kelch motif Kelch_1 PF01344.25 ORF11608 - 2.7e-06 26.9 1.6 2.8 7.6 0.0 5.5 7 0 0 7 7 7 3 Kelch motif Kelch_2 PF07646.15 ORF11608 - 0.00015 21.6 3.3 26 5.0 0.0 5.8 6 1 0 6 6 6 1 Kelch motif PUNUT PF16913.5 ORF11425 - 3e-11 43.1 4.8 3e-11 43.1 4.8 2.4 2 1 1 3 3 3 1 Purine nucleobase transmembrane transport EamA PF00892.20 ORF11425 - 8.1e-11 42.3 41.4 1.5e-06 28.5 6.3 3.1 3 0 0 3 3 3 2 EamA-like transporter family WBP-1 PF11669.8 ORF11425 - 2.8 8.6 4.7 17 6.1 0.0 3.0 3 0 0 3 3 3 0 WW domain-binding protein 1 DAO PF01266.24 ORF103944 - 4.5e-15 56.1 3.5 1.1e-08 35.0 0.6 2.5 1 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF103944 - 6.2e-10 38.7 2.3 2.6e-07 30.1 0.6 2.3 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 ORF103944 - 7.4e-10 38.1 0.0 5e-07 28.8 0.0 2.1 2 0 0 2 2 2 2 HI0933-like protein FAD_oxidored PF12831.7 ORF103944 - 6.2e-09 35.7 0.0 9.3e-09 35.1 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF103944 - 3.3e-08 33.1 0.0 9.4e-08 31.6 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF103944 - 1.5e-07 31.6 0.1 5.5e-07 29.7 0.1 2.0 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 ORF103944 - 1.7e-07 30.8 0.7 8.3e-07 28.6 0.7 2.2 1 1 0 1 1 1 1 FAD binding domain GIDA PF01134.22 ORF103944 - 5.5e-07 29.0 0.0 1e-05 24.8 0.0 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 ORF103944 - 7.1e-06 25.1 0.2 0.085 11.7 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase Lycopene_cycl PF05834.12 ORF103944 - 1e-05 24.8 1.1 5.2e-05 22.5 1.1 1.9 1 1 0 1 1 1 1 Lycopene cyclase protein Thi4 PF01946.17 ORF103944 - 3.8e-05 23.0 0.0 6.6e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 ORF103944 - 0.00051 19.4 1.7 0.0012 18.2 1.2 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF103944 - 0.01 16.4 0.0 1.3 9.7 0.0 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 ORF103944 - 0.016 15.1 0.0 0.048 13.5 0.0 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 ORF103944 - 0.19 11.4 0.1 0.3 10.7 0.1 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Sec1 PF00995.23 ORF92144 - 3e-53 182.0 0.0 3.3e-53 181.8 0.0 1.0 1 0 0 1 1 1 1 Sec1 family Peptidase_M18 PF02127.15 ORF91107 - 2.8e-135 451.5 0.0 3.4e-135 451.2 0.0 1.1 1 0 0 1 1 1 1 Aminopeptidase I zinc metalloprotease (M18) Peptidase_M42 PF05343.14 ORF91107 - 8.9e-07 28.2 0.0 9.4e-05 21.6 0.0 2.2 2 0 0 2 2 2 2 M42 glutamyl aminopeptidase AP-5_subunit_s1 PF15001.6 ORF91107 - 0.049 13.6 0.2 0.081 12.9 0.2 1.3 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 DUF1840 PF08895.11 ORF91107 - 0.11 12.8 1.0 0.23 11.8 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) Dpoe2NT PF12213.8 ORF88993 - 0.33 11.3 2.7 54 4.2 0.1 3.7 3 0 0 3 3 3 0 DNA polymerases epsilon N terminal IQ PF00612.27 ORF88993 - 1.5 8.8 6.8 0.24 11.3 0.5 3.0 3 0 0 3 3 3 0 IQ calmodulin-binding motif EIF_2_alpha PF07541.12 ORF7553 - 0.28 11.3 0.7 1.3 9.1 0.0 2.2 3 0 0 3 3 3 0 Eukaryotic translation initiation factor 2 alpha subunit Acyl-CoA_dh_1 PF00441.24 ORF7398 - 3.3e-38 131.2 1.6 4.6e-38 130.8 1.6 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF7398 - 8.2e-22 77.2 0.0 1.9e-21 76.1 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 ORF7398 - 2.2e-08 34.4 0.0 3.9e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 ORF7398 - 0.0056 17.3 0.0 0.015 15.9 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Dynein_C PF18199.1 ORF71849 - 2.5e-33 115.6 0.0 3.5e-33 115.1 0.0 1.1 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF71849 - 0.072 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain Polysacc_deac_2 PF04748.13 ORF71849 - 0.1 11.8 0.2 8.7 5.5 0.1 2.3 2 0 0 2 2 2 0 Divergent polysaccharide deacetylase CAF1 PF04857.20 ORF71234 - 1.4e-20 73.7 0.8 2.3e-10 40.2 0.0 3.1 2 1 0 2 2 2 2 CAF1 family ribonuclease Asp PF00026.23 ORF69991 - 1e-38 133.5 3.2 1.5e-38 133.0 3.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF69991 - 6.7e-05 22.7 0.0 0.00013 21.8 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal TAXi_N PF14543.6 ORF69991 - 0.0026 18.0 1.2 0.47 10.7 0.1 2.8 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 ORF69991 - 0.039 14.6 0.0 0.56 10.9 0.0 2.3 2 0 0 2 2 2 0 Aspartyl protease MFS_1 PF07690.16 ORF54173 - 3.1e-13 49.4 18.3 3.1e-13 49.4 18.3 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF3328 PF11807.8 ORF54173 - 2.8 7.6 3.6 1.5 8.5 0.1 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF3328) Nkap_C PF06047.11 ORF51324 - 9.7e-46 154.1 1.6 9.7e-46 154.1 1.6 4.0 2 1 1 3 3 3 1 NF-kappa-B-activating protein C-terminal domain SWI-SNF_Ssr4 PF08549.10 ORF51324 - 1.6 7.3 32.6 2 6.9 32.6 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) mTERF PF02536.14 ORF46669 - 1.6e-31 109.5 0.0 9e-29 100.4 0.0 2.2 1 1 1 2 2 2 2 mTERF DUF1127 PF06568.11 ORF46669 - 0.023 14.4 0.0 13 5.6 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF1127) TAL_effector PF03377.13 ORF46669 - 0.054 13.8 0.1 22 5.4 0.0 3.6 3 0 0 3 3 3 0 TAL effector repeat PI_PP_I PF18363.1 ORF46669 - 0.096 12.9 0.0 3.7 7.8 0.0 2.8 1 1 2 3 3 3 0 Phosphoinositide phosphatase insertion domain Pkinase PF00069.25 ORF4338 - 2e-45 155.3 0.0 2.9e-45 154.7 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4338 - 2.5e-22 79.4 0.0 3.5e-22 78.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF4338 - 1.9e-08 34.0 0.0 2.8e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF4338 - 5.7e-06 25.8 0.1 1.4e-05 24.6 0.0 1.6 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF4338 - 0.00035 19.5 0.0 0.00079 18.3 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF4338 - 0.0033 17.4 0.0 0.0084 16.1 0.0 1.6 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF4338 - 0.03 13.3 0.0 0.047 12.6 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain DUF3237 PF11578.8 ORF4338 - 0.13 12.1 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) REPA_OB_2 PF16900.5 ORF42960 - 6.8e-21 74.0 0.8 4.4e-17 61.8 0.0 2.8 2 0 0 2 2 2 2 Replication protein A OB domain tRNA_anti-codon PF01336.25 ORF42960 - 3.6e-09 36.5 3.2 4.4e-07 29.8 0.1 3.3 3 0 0 3 3 3 2 OB-fold nucleic acid binding domain DUF223 PF02721.14 ORF42960 - 0.00073 19.8 0.7 0.00073 19.8 0.7 1.9 2 0 0 2 2 2 1 Domain of unknown function DUF223 Rep-A_N PF04057.12 ORF42960 - 0.0051 16.8 0.7 0.011 15.7 0.3 1.8 2 0 0 2 2 2 1 Replication factor-A protein 1, N-terminal domain VSP PF03302.13 ORF41908 - 0.00041 19.3 13.5 0.00041 19.3 13.5 5.6 1 1 2 3 3 3 2 Giardia variant-specific surface protein VDE PF07137.11 ORF32568 - 1.5e-31 109.8 0.0 2.5e-31 109.1 0.0 1.3 1 0 0 1 1 1 1 VDE lipocalin domain Pkinase PF00069.25 ORF30489 - 3.1e-43 148.0 0.1 5.6e-43 147.2 0.1 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF30489 - 1.3e-20 73.7 0.0 1.9e-20 73.2 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF30489 - 0.00017 21.0 0.0 0.00024 20.5 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF30489 - 0.0029 16.6 0.0 0.0043 16.0 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF30489 - 0.024 14.0 0.0 0.046 13.1 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Cactin_mid PF10312.9 ORF30489 - 0.12 12.0 2.7 0.92 9.2 0.2 2.3 2 1 0 2 2 2 0 Conserved mid region of cactin Herpes_UL14 PF03580.14 ORF30489 - 0.22 11.8 1.4 0.54 10.5 1.4 1.6 1 0 0 1 1 1 0 Herpesvirus UL14-like protein p450 PF00067.22 ORF24245 - 6.3e-76 256.0 0.0 7.4e-76 255.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 YjbE PF11106.8 ORF16663 - 9.3 6.6 10.8 0.089 13.0 1.9 2.3 3 0 0 3 3 3 0 Exopolysaccharide production protein YjbE DHC_N2 PF08393.13 ORF143958 - 4.8e-105 351.9 13.9 6e-105 351.6 13.9 1.1 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 ERK-JNK_inhib PF15002.6 ORF143958 - 0.24 11.1 0.1 0.24 11.1 0.1 3.1 3 0 0 3 3 3 0 ERK and JNK pathways, inhibitor MBOAT PF03062.19 ORF143211 - 4.3e-30 105.3 16.8 4.3e-30 105.3 16.8 1.6 1 1 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family Ion_trans PF00520.31 ORF138874 - 3.5e-19 69.0 10.8 4.8e-19 68.5 10.8 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF138874 - 5.8e-10 38.0 5.5 1.6e-05 24.1 0.4 3.0 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF138874 - 1.3e-09 38.4 2.4 2.9e-09 37.3 2.3 1.8 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF138874 - 3.3e-09 35.9 2.6 0.00049 19.8 0.2 3.2 2 1 1 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF138874 - 4.6e-09 35.4 0.3 0.00035 19.9 0.3 2.8 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF138874 - 1.2e-07 31.5 2.5 0.0048 16.7 1.1 3.5 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_10 PF14788.6 ORF138874 - 0.16 11.9 1.1 18 5.3 0.0 2.6 1 1 1 2 2 2 0 EF hand EF-hand_4 PF12763.7 ORF138874 - 0.21 11.6 0.4 0.48 10.4 0.1 1.7 2 0 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand TMEM164 PF14808.6 ORF138874 - 4.5 6.5 10.2 0.037 13.4 0.7 2.2 3 0 0 3 3 3 0 TMEM164 family LicD PF04991.13 ORF125392 - 0.011 15.8 0.0 0.14 12.2 0.0 2.1 2 0 0 2 2 2 0 LicD family EF-hand_1 PF00036.32 ORF119757 - 0.0011 18.4 0.3 0.0023 17.4 0.3 1.6 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF119757 - 0.0084 16.5 0.2 0.024 15.1 0.2 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF119757 - 0.02 14.8 0.1 0.055 13.4 0.1 1.8 1 0 0 1 1 1 0 EF-hand domain EF-hand_8 PF13833.6 ORF119757 - 0.18 11.7 1.4 7.6 6.5 0.8 2.5 2 0 0 2 2 2 0 EF-hand domain pair Abhydrolase_3 PF07859.13 ORF101593 - 8.2e-31 107.5 0.0 1.1e-30 107.1 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF101593 - 8.5e-08 31.4 0.1 1.1e-07 31.1 0.1 1.3 1 0 0 1 1 1 1 Steryl acetyl hydrolase COesterase PF00135.28 ORF101593 - 0.009 14.9 0.0 0.021 13.7 0.0 1.5 2 0 0 2 2 2 1 Carboxylesterase family RCC1_2 PF13540.6 NODE_12175_length_1264_cov_91.127746_g9078_i0forward_frame_3 - 0.023 14.5 0.0 0.3 10.9 0.0 2.5 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat HABP4_PAI-RBP1 PF04774.15 ORF97526 - 4.1e-06 27.6 14.5 4.1e-06 27.6 14.5 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family Methyltr_RsmB-F PF01189.17 ORF85418 - 2.3e-69 233.1 0.0 2.3e-69 233.1 0.0 1.9 2 0 0 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 ORF85418 - 1.8e-09 38.0 1.6 2.1e-08 34.5 0.0 2.8 3 0 0 3 3 3 1 N-terminal domain of 16S rRNA methyltransferase RsmF FtsJ PF01728.19 ORF85418 - 0.00028 21.0 0.0 0.00056 20.1 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 ORF85418 - 0.0025 17.6 0.8 0.0039 17.0 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF85418 - 0.012 16.3 0.0 0.028 15.1 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 ORF85418 - 0.071 12.9 0.0 0.17 11.6 0.0 1.6 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Abhydro_lipase PF04083.16 ORF83111 - 1.7e-14 53.1 0.0 4.2e-14 51.9 0.0 1.7 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF83111 - 4.9e-14 52.6 0.3 1e-12 48.3 0.3 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF83111 - 0.0028 17.0 0.0 2.1 7.5 0.0 2.5 2 1 0 2 2 2 2 Serine aminopeptidase, S33 LIDHydrolase PF10230.9 ORF83111 - 0.015 14.8 0.1 0.041 13.4 0.0 1.8 2 0 0 2 2 2 0 Lipid-droplet associated hydrolase PAF-AH_p_II PF03403.13 ORF83111 - 0.053 12.0 0.0 0.078 11.5 0.0 1.2 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II DUF3141 PF11339.8 ORF83111 - 0.089 11.2 0.0 0.15 10.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3141) FSH1 PF03959.13 ORF83111 - 0.09 12.4 0.1 0.25 10.9 0.0 1.7 2 0 0 2 2 2 0 Serine hydrolase (FSH1) DEAD PF00270.29 ORF81772 - 1.1e-45 155.5 0.0 2.2e-44 151.3 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF81772 - 5.4e-30 104.0 0.0 1.4e-28 99.4 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF81772 - 7.5e-06 26.0 0.0 1.3e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 ORF81772 - 0.0037 16.5 0.0 0.0054 16.0 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 ORF81772 - 0.023 14.9 0.1 0.087 13.1 0.1 2.0 1 1 0 1 1 1 0 AAA domain 6PGD PF00393.19 ORF74905 - 0.12 11.7 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 6-phosphogluconate dehydrogenase, C-terminal domain NES_C_h PF18208.1 ORF71268 - 0.011 16.0 2.3 0.011 16.0 2.3 2.8 4 0 0 4 4 4 0 Nicking enzyme C-terminal middle helical domain Thiolase_N PF00108.23 ORF70854 - 5.9e-76 255.3 7.1 9.8e-76 254.5 7.1 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF70854 - 6.5e-50 167.9 1.2 1.3e-49 167.0 0.1 2.1 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF70854 - 0.0045 16.6 2.3 0.012 15.2 0.6 2.5 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III_C PF08541.10 ORF70854 - 0.038 14.2 0.1 0.33 11.1 0.0 2.7 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Polysacc_deac_1 PF01522.21 ORF67970 - 1.1e-09 38.2 0.0 2.1e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Ureidogly_lyase PF04115.12 ORF67970 - 0.0057 16.4 0.0 0.0092 15.8 0.0 1.4 1 0 0 1 1 1 1 Ureidoglycolate lyase DUF2334 PF10096.9 ORF67970 - 0.01 15.5 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2334) Glyco_hydro_57 PF03065.15 ORF67970 - 0.054 12.7 0.0 1.8 7.7 0.0 2.1 1 1 1 2 2 2 0 Glycosyl hydrolase family 57 DUF2020 PF09449.10 ORF67970 - 0.098 12.5 0.2 0.24 11.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF2020) HABP4_PAI-RBP1 PF04774.15 ORF66137 - 4.1e-06 27.6 14.5 4.1e-06 27.6 14.5 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family Aa_trans PF01490.18 ORF6169 - 2.6e-27 95.6 12.0 3.2e-27 95.3 12.0 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Cation_ATPase_C PF00689.21 ORF6169 - 0.0045 16.7 6.8 0.012 15.3 0.5 2.6 2 1 0 2 2 2 2 Cation transporting ATPase, C-terminus Trp_Tyr_perm PF03222.13 ORF6169 - 0.0057 15.7 14.9 0.0098 15.0 14.9 1.5 1 1 0 1 1 1 1 Tryptophan/tyrosine permease family Fumarate_red_C PF02300.17 ORF6169 - 0.21 11.7 2.1 0.23 11.5 0.3 2.1 2 0 0 2 2 2 0 Fumarate reductase subunit C ETRAMP PF09716.10 ORF6169 - 0.79 9.8 0.0 0.79 9.8 0.0 2.9 3 0 0 3 3 3 0 Malarial early transcribed membrane protein (ETRAMP) Pkinase PF00069.25 ORF61326 - 1.8e-67 227.5 0.0 2.2e-67 227.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF61326 - 5.3e-30 104.6 0.0 3.5e-29 101.9 0.0 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF61326 - 2.2e-05 23.9 0.0 3.9e-05 23.1 0.0 1.6 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 ORF61326 - 0.0026 17.2 0.2 0.0046 16.3 0.2 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF61326 - 0.0029 17.3 0.5 0.033 13.8 0.1 2.3 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Pox_ser-thr_kin PF05445.11 ORF61326 - 0.031 13.3 0.1 0.054 12.5 0.1 1.3 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF61326 - 0.12 11.1 0.1 0.2 10.4 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase FlaC_arch PF05377.11 ORF57329 - 0.075 13.4 7.1 0.079 13.4 2.3 3.2 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Myosin_tail_1 PF01576.19 ORF57329 - 0.11 10.2 15.9 0.0041 15.0 9.9 1.5 2 0 0 2 2 2 0 Myosin tail DUF4472 PF14739.6 ORF57329 - 0.19 12.4 8.5 0.35 11.6 5.4 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4472) ATG16 PF08614.11 ORF57329 - 0.21 11.8 10.1 0.081 13.1 4.8 2.2 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) zf_CCCH_4 PF18345.1 ORF57329 - 0.35 11.0 3.1 0.73 10.0 3.1 1.6 1 0 0 1 1 1 0 Zinc finger domain FAM209 PF15206.6 ORF57329 - 0.7 9.7 6.4 0.082 12.7 1.8 1.8 2 0 0 2 2 2 0 FAM209 family Tropomyosin_1 PF12718.7 ORF57329 - 4.6 7.4 17.8 4 7.6 11.0 2.8 2 0 0 2 2 2 0 Tropomyosin like SlyX PF04102.12 ORF57329 - 6.9 7.4 8.4 24 5.6 0.5 3.8 3 1 1 4 4 4 0 SlyX PsaA_PsaB PF00223.19 ORF51232 - 4.3e-41 140.9 22.3 8.2e-29 100.3 10.2 3.9 1 1 2 3 3 3 3 Photosystem I psaA/psaB protein HTH_9 PF08221.11 ORF51232 - 0.005 16.9 1.2 0.25 11.5 1.0 2.5 1 1 1 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF1077 PF06417.12 ORF51232 - 0.16 11.9 1.5 0.57 10.2 0.8 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF1077) CNOT1_TTP_bind PF16417.5 ORF44901 - 4.3e-20 71.7 0.0 7.9e-20 70.8 0.0 1.4 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain Pkinase PF00069.25 ORF40643 - 5.8e-70 235.7 0.5 9.2e-70 235.0 0.5 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF40643 - 2.4e-32 112.2 0.0 3.5e-32 111.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF40643 - 5.2e-08 32.6 0.0 1e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF40643 - 6.9e-06 25.1 0.0 1.2e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF40643 - 0.0007 18.6 3.7 0.0007 18.6 3.7 2.0 2 1 0 2 2 2 1 Haspin like kinase domain Pkinase_C PF00433.24 ORF40643 - 0.0015 19.1 0.4 0.0031 18.2 0.4 1.5 1 0 0 1 1 1 1 Protein kinase C terminal domain Kdo PF06293.14 ORF40643 - 0.0017 17.8 0.0 0.0028 17.0 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF40643 - 0.0039 16.9 2.0 0.4 10.3 0.1 2.4 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Seadorna_VP7 PF07387.11 ORF40643 - 0.008 15.3 1.5 0.025 13.7 1.4 1.7 1 1 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 ORF40643 - 0.19 11.6 0.0 0.28 11.0 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4203 PF13886.6 ORF39942 - 1.3e-23 83.8 37.7 2e-23 83.1 37.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) MFS_1 PF07690.16 ORF23689 - 5.1e-23 81.6 33.2 5.1e-23 81.6 33.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Actin PF00022.19 ORF22717 - 9.9e-85 284.6 0.0 1.6e-84 283.9 0.0 1.3 1 0 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF22717 - 9.7e-05 21.3 0.0 0.069 11.9 0.0 2.3 2 0 0 2 2 2 2 MreB/Mbl protein ANAPC9 PF12856.7 ORF22717 - 0.018 15.2 0.6 0.036 14.2 0.0 1.8 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 9 FtsA PF14450.6 ORF22717 - 0.022 15.2 0.0 0.044 14.2 0.0 1.6 1 1 0 1 1 1 0 Cell division protein FtsA baeRF_family10 PF18854.1 ORF22717 - 0.031 14.5 0.0 0.057 13.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 10 DUF1465 PF07323.12 ORF2162 - 3.9 7.3 8.8 1.8 8.4 4.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1465) HABP4_PAI-RBP1 PF04774.15 ORF16835 - 4.1e-06 27.6 14.5 4.1e-06 27.6 14.5 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family Apolipoprotein PF01442.18 ORF151155 - 0.0034 17.3 0.1 0.0064 16.4 0.1 1.6 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF151155 - 0.016 15.2 1.6 0.016 15.2 1.6 2.6 3 1 1 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus ACCA PF03255.14 ORF151155 - 1.7 8.5 7.4 0.92 9.4 2.4 2.8 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Synaptonemal_3 PF15191.6 ORF151155 - 2.5 7.9 10.5 7.3 6.4 0.7 3.5 2 1 1 3 3 3 0 Synaptonemal complex central element protein 3 DUF1664 PF07889.12 ORF151155 - 4.9 7.2 10.1 6.1 6.9 6.0 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) NPV_P10 PF05531.12 ORF151155 - 6.4 7.3 15.9 18 5.9 1.9 4.5 2 1 2 4 4 4 0 Nucleopolyhedrovirus P10 protein DUF4203 PF13886.6 ORF148913 - 1.3e-23 83.8 37.7 2e-23 83.1 37.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) Asp PF00026.23 ORF138519 - 8.4e-45 153.5 12.5 1.1e-44 153.1 12.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF138519 - 1e-09 38.9 1.4 7.7e-06 26.3 0.2 2.2 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal fragilysinNterm PF16376.5 ORF138519 - 0.00055 19.7 1.8 0.0081 15.9 0.0 2.4 2 0 0 2 2 2 1 N-terminal domain of fragilysin STT3 PF02516.14 ORF136965 - 0.0043 16.1 0.0 0.0054 15.7 0.0 1.1 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit MFS_1 PF07690.16 ORF129348 - 5.1e-23 81.6 33.2 5.1e-23 81.6 33.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Vps54 PF07928.12 ORF128593 - 4.2e-30 104.9 1.4 7.9e-30 104.0 1.4 1.5 1 0 0 1 1 1 1 Vps54-like protein HABP4_PAI-RBP1 PF04774.15 ORF123206 - 4.1e-06 27.6 14.5 4.1e-06 27.6 14.5 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family Lipocalin_2 PF08212.12 ORF12274 - 1.7e-25 89.7 0.0 3.3e-25 88.7 0.0 1.5 1 0 0 1 1 1 1 Lipocalin-like domain adh_short PF00106.25 ORF12274 - 5.3e-07 29.3 0.0 0.011 15.1 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF12274 - 0.00016 21.4 0.0 0.0024 17.5 0.0 2.2 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 ORF12274 - 0.016 14.7 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Amidohydro_2 PF04909.14 ORF12274 - 0.019 14.8 0.0 0.042 13.6 0.0 1.6 2 0 0 2 2 2 0 Amidohydrolase Lig_chan PF00060.26 ORF112901 - 0.0038 17.1 1.3 0.0055 16.6 1.0 1.3 1 1 0 1 1 1 1 Ligand-gated ion channel DUF1646 PF07854.12 ORF112901 - 0.12 11.7 0.1 0.18 11.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1646) DUF4203 PF13886.6 ORF11099 - 1.3e-23 83.8 37.7 2e-23 83.1 37.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) YjcQ PF09639.10 ORF107223 - 0.0036 17.5 0.1 0.15 12.3 0.0 3.1 3 1 0 3 3 3 1 YjcQ protein AP_endonuc_2 PF01261.24 ORF107223 - 0.057 12.9 0.0 0.22 10.9 0.0 1.8 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel Thiolase_N PF00108.23 ORF105366 - 5.9e-76 255.3 7.1 9.8e-76 254.5 7.1 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF105366 - 6.5e-50 167.9 1.2 1.3e-49 167.0 0.1 2.1 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF105366 - 0.0045 16.6 2.3 0.012 15.2 0.6 2.5 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III_C PF08541.10 ORF105366 - 0.038 14.2 0.1 0.33 11.1 0.0 2.7 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal cNMP_binding PF00027.29 ORF104963 - 2.8e-05 24.1 0.0 6e-05 23.0 0.0 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Cyt_bd_oxida_I PF01654.17 ORF102365 - 1.3e-117 393.0 11.5 1.5e-117 392.8 11.5 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit I DUF3099 PF11298.8 ORF102365 - 0.29 11.3 1.7 1.4 9.1 1.7 2.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) FAST_1 PF06743.15 ORF99456 - 8.9e-10 38.4 0.5 0.0018 18.2 0.0 5.3 2 2 5 7 7 7 2 FAST kinase-like protein, subdomain 1 Sin3a_C PF16879.5 ORF91368 - 2.2e-20 73.5 6.0 6.9e-20 71.9 5.9 1.9 1 1 0 1 1 1 1 C-terminal domain of Sin3a protein DUF4179 PF13786.6 ORF91368 - 0.27 11.7 1.0 5.4 7.5 0.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4179) DXP_reductoisom PF02670.16 ORF91350 - 0.22 12.2 0.5 1.1 10.0 0.5 2.1 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Asparaginase_2 PF01112.18 ORF91350 - 8.3 5.3 8.7 0.66 8.9 1.5 2.2 2 0 0 2 2 2 0 Asparaginase COX1 PF00115.20 ORF86514 - 1.7e-90 304.0 44.1 1.9e-90 303.8 44.1 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I PPR_2 PF13041.6 ORF86337 - 1.1e-20 73.5 0.9 1.3e-08 34.9 0.0 7.0 4 2 4 8 8 8 3 PPR repeat family PPR_3 PF13812.6 ORF86337 - 1.2e-13 50.9 0.0 0.00017 21.6 0.0 6.2 6 1 1 7 7 7 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF86337 - 2.4e-10 39.9 3.5 0.013 15.7 0.0 6.7 6 1 0 6 6 6 2 PPR repeat DUF2711 PF10924.8 ORF86337 - 0.041 13.5 0.2 0.54 9.8 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2711) Clathrin PF00637.20 ORF86337 - 0.068 13.0 0.0 16 5.3 0.0 3.9 4 1 1 5 5 5 0 Region in Clathrin and VPS CaATP_NAI PF12515.8 ORF86337 - 0.19 11.3 1.5 7.4 6.3 0.0 3.6 4 0 0 4 4 4 0 Ca2+-ATPase N terminal autoinhibitory domain Tagatose_6_P_K PF08013.11 ORF82098 - 3.8e-199 661.6 0.0 4.3e-199 661.5 0.0 1.0 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase F_bP_aldolase PF01116.20 ORF82098 - 0.00039 20.0 0.0 0.00061 19.4 0.0 1.2 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Prominin PF05478.11 ORF77740 - 0.00041 18.5 12.7 0.00041 18.5 12.7 1.7 2 0 0 2 2 2 1 Prominin DUF3584 PF12128.8 ORF77740 - 0.00053 17.7 23.2 0.00085 17.0 23.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Lebercilin PF15619.6 ORF77740 - 0.0019 17.9 25.2 0.0031 17.2 25.2 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Syntaxin PF00804.25 ORF77740 - 0.003 17.3 7.5 0.003 17.3 7.5 2.9 3 0 0 3 3 3 1 Syntaxin COG5 PF10392.9 ORF77740 - 0.0038 17.4 9.6 0.0038 17.4 9.6 1.8 2 0 0 2 2 1 1 Golgi transport complex subunit 5 PRKCSH_1 PF13015.6 ORF77740 - 0.007 16.1 1.2 0.007 16.1 1.2 2.4 3 1 0 3 3 3 1 Glucosidase II beta subunit-like protein Metal_resist PF13801.6 ORF77740 - 0.011 15.9 1.4 0.017 15.3 0.9 1.5 1 1 0 1 1 1 0 Heavy-metal resistance TolA_bind_tri PF16331.5 ORF77740 - 0.024 14.7 3.3 0.024 14.7 3.3 3.3 1 1 2 3 3 3 0 TolA binding protein trimerisation MbeD_MobD PF04899.12 ORF77740 - 0.041 14.0 0.5 0.32 11.1 1.0 2.2 2 0 0 2 2 2 0 MbeD/MobD like ATG16 PF08614.11 ORF77740 - 0.095 12.9 21.8 0.15 12.3 21.8 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) CALCOCO1 PF07888.11 ORF77740 - 0.099 11.5 19.6 0.27 10.1 19.6 1.6 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Dor1 PF04124.12 ORF77740 - 0.15 10.7 13.1 0.069 11.8 10.5 1.7 2 0 0 2 2 2 0 Dor1-like family Cep57_CLD_2 PF14197.6 ORF77740 - 0.22 11.6 14.0 0.1 12.7 10.8 2.1 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 bZIP_2 PF07716.15 ORF77740 - 0.39 10.8 9.5 1.5 9.0 0.3 2.9 2 1 1 3 3 3 0 Basic region leucine zipper DUF2730 PF10805.8 ORF77740 - 0.42 10.7 6.9 0.46 10.6 5.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Atg14 PF10186.9 ORF77740 - 0.44 9.6 16.2 0.96 8.5 16.2 1.6 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 NPV_P10 PF05531.12 ORF77740 - 0.88 10.1 8.0 0.9 10.0 5.9 2.2 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein MCC-bdg_PDZ PF10506.9 ORF77740 - 0.94 9.5 6.4 0.85 9.7 3.9 2.3 2 0 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome TPR_MLP1_2 PF07926.12 ORF77740 - 1.7 8.7 34.2 0.083 12.9 6.5 3.3 2 1 2 4 4 3 0 TPR/MLP1/MLP2-like protein DASH_Dam1 PF08653.10 ORF77740 - 2.1 8.2 4.7 3.1 7.7 1.3 3.1 1 1 1 2 2 2 0 DASH complex subunit Dam1 DUF812 PF05667.11 ORF77740 - 2.9 6.7 29.2 0.68 8.7 25.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF812) Baculo_PEP_C PF04513.12 ORF77740 - 4.1 7.5 10.3 3.3 7.7 6.6 2.4 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus CENP-F_leu_zip PF10473.9 ORF77740 - 6 6.9 36.8 0.36 10.9 21.5 3.1 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4407 PF14362.6 ORF77740 - 8.4 5.6 16.5 16 4.7 16.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PEP-utilisers_N PF05524.13 ORF77740 - 8.9 6.5 12.7 2.6 8.3 7.2 2.4 1 1 1 2 2 2 0 PEP-utilising enzyme, N-terminal TGT PF01702.18 ORF67500 - 6.6e-135 449.8 0.0 8.1e-135 449.5 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase DASH_Dad3 PF08656.10 ORF61561 - 0.083 13.0 4.1 0.26 11.4 4.1 1.9 1 1 0 1 1 1 0 DASH complex subunit Dad3 ATG16 PF08614.11 ORF61561 - 0.14 12.4 12.3 0.32 11.2 12.3 1.6 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Orn_Arg_deC_N PF02784.16 ORF59357 - 1.1e-69 234.6 0.0 1.4e-69 234.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 ORF59357 - 5.5e-27 93.9 0.0 6.4e-27 93.7 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Band_7 PF01145.25 ORF59264 - 5.3e-22 78.7 2.5 8e-22 78.1 0.1 2.2 1 1 1 2 2 2 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 ORF59264 - 0.011 15.5 0.4 0.011 15.5 0.4 2.6 2 1 0 3 3 3 0 SPFH domain-Band 7 family Carbpep_Y_N PF05388.11 ORF59264 - 0.12 13.0 4.5 0.1 13.1 2.6 1.9 2 0 0 2 2 2 0 Carboxypeptidase Y pro-peptide Pox_A21 PF05323.12 ORF59264 - 0.16 12.6 2.2 0.71 10.5 2.2 2.1 1 0 0 1 1 1 0 Poxvirus A21 Protein DUF948 PF06103.11 ORF59264 - 0.63 10.3 3.4 2 8.7 0.6 2.4 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Chloroa_b-bind PF00504.21 ORF58049 - 3.5e-71 239.0 4.9 1.4e-34 120.0 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF58049 - 0.004 17.4 0.0 8.2 6.7 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF58049 - 0.0061 16.9 0.0 6.9 7.1 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF58049 - 0.014 15.4 0.0 9.1 6.4 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF58049 - 0.045 13.8 0.0 13 5.8 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal TPR_12 PF13424.6 ORF53218 - 1.8e-13 50.6 12.6 0.00047 20.4 0.4 4.8 4 1 0 4 4 4 3 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF53218 - 0.0013 18.7 1.5 2.2 8.4 0.1 3.3 3 0 0 3 3 3 2 Anaphase-promoting complex subunit 5 TPR_2 PF07719.17 ORF53218 - 0.0014 18.6 12.0 16 5.9 0.0 6.6 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF53218 - 0.12 12.5 1.3 43 4.5 0.0 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF53218 - 0.21 11.9 5.1 32 4.8 0.1 4.8 3 3 2 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF53218 - 1.4 9.6 23.6 1.1 10.0 1.0 5.8 5 2 1 6 6 6 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF53218 - 3.5 8.2 11.7 5.3 7.6 0.6 3.9 3 1 1 4 4 4 0 Tetratricopeptide repeat FUSC PF04632.12 ORF52514 - 7.7e-25 87.5 10.7 7.7e-25 87.5 10.7 2.1 1 1 1 2 2 2 2 Fusaric acid resistance protein family FUSC_2 PF13515.6 ORF52514 - 3.6e-09 36.8 11.1 7e-09 35.9 10.7 1.7 1 1 1 2 2 2 1 Fusaric acid resistance protein-like ALMT PF11744.8 ORF52514 - 0.0073 15.2 2.9 0.011 14.6 2.9 1.2 1 0 0 1 1 1 1 Aluminium activated malate transporter ArAE_1 PF06081.11 ORF52514 - 3.1 7.9 6.3 9.9 6.3 6.3 1.9 1 1 0 1 1 1 0 Aromatic acid exporter family member 1 WD40 PF00400.32 ORF49654 - 9e-22 77.0 14.7 0.00026 21.7 0.0 6.1 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF49654 - 6.4e-14 52.0 0.9 0.00026 21.3 0.0 4.7 2 2 3 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF49654 - 4.3e-06 26.7 0.4 0.0016 18.4 0.0 3.0 1 1 2 3 3 3 1 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 ORF49654 - 0.0048 15.9 0.1 0.029 13.3 0.0 2.2 2 0 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein DUF3810 PF12725.7 ORF485 - 6.7e-05 22.4 1.4 6.7e-05 22.4 1.4 2.3 1 1 0 2 2 2 1 Protein of unknown function (DUF3810) BRI3BP PF14965.6 ORF485 - 0.00068 19.2 0.1 0.0016 17.9 0.1 1.6 1 0 0 1 1 1 1 Negative regulator of p53/TP53 DUF4472 PF14739.6 ORF485 - 0.0049 17.6 0.7 0.023 15.4 0.7 2.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4472) LOH1CR12 PF10158.9 ORF485 - 0.0059 16.6 14.2 0.15 12.1 4.7 2.8 3 0 0 3 3 3 2 Tumour suppressor protein THOC7 PF05615.13 ORF485 - 0.0063 16.8 0.2 0.0063 16.8 0.2 2.7 3 1 0 3 3 3 1 Tho complex subunit 7 HEPN_AbiU2 PF18734.1 ORF485 - 0.0087 15.6 0.2 0.0087 15.6 0.2 2.9 3 1 1 4 4 4 1 AbiU2 Apolipoprotein PF01442.18 ORF485 - 0.014 15.3 0.4 4 7.3 0.9 2.4 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF485 - 0.014 15.4 10.3 0.74 9.9 2.9 3.6 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Syntaxin-6_N PF09177.11 ORF485 - 0.039 14.5 6.4 1.3 9.6 1.2 4.1 3 1 1 4 4 4 0 Syntaxin 6, N-terminal PspA_IM30 PF04012.12 ORF485 - 0.087 12.4 0.9 0.2 11.2 0.9 1.6 1 0 0 1 1 1 0 PspA/IM30 family PMEI PF04043.15 ORF485 - 0.11 12.9 3.1 0.12 12.7 0.8 2.2 2 1 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor YtxH PF12732.7 ORF485 - 0.11 13.0 1.5 64 4.2 0.0 4.0 3 3 0 3 3 3 0 YtxH-like protein DivIC PF04977.15 ORF485 - 0.23 11.2 2.0 1.1 9.0 0.3 2.6 1 1 1 2 2 2 0 Septum formation initiator Striatin PF08232.12 ORF485 - 0.37 11.4 4.1 0.15 12.7 1.2 1.8 2 0 0 2 2 2 0 Striatin family FliD_N PF02465.18 ORF485 - 0.56 10.9 5.0 18 6.1 0.1 3.8 3 1 1 4 4 4 0 Flagellar hook-associated protein 2 N-terminus DUF745 PF05335.13 ORF485 - 0.8 9.4 3.5 0.87 9.3 0.5 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF745) LRRFIP PF09738.9 ORF485 - 0.9 9.0 10.3 77 2.6 10.3 2.6 1 1 0 1 1 1 0 LRRFIP family TSC22 PF01166.18 ORF485 - 1.1 9.6 7.8 3.2 8.1 0.3 3.7 2 2 2 4 4 4 0 TSC-22/dip/bun family TMPIT PF07851.13 ORF485 - 1.6 7.9 13.6 0.018 14.3 2.4 2.9 2 1 1 3 3 3 0 TMPIT-like protein HECT PF00632.25 ORF44119 - 9.7e-72 242.0 2.9 1.3e-71 241.6 2.9 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Hist_deacetyl PF00850.19 ORF20325 - 3e-76 256.8 0.0 3.7e-76 256.5 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Ldh_1_N PF00056.23 ORF20195 - 2.2e-36 125.0 0.1 3.5e-36 124.4 0.1 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF20195 - 5.8e-24 84.9 0.0 9.5e-24 84.2 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 ORF20195 - 0.011 15.2 1.5 0.077 12.6 0.3 2.1 1 1 1 2 2 2 0 Family 4 glycosyl hydrolase ABC_tran PF00005.27 ORF148342 - 3.8e-14 53.4 0.0 1.7e-13 51.3 0.0 2.1 3 0 0 3 3 3 1 ABC transporter AAA_21 PF13304.6 ORF148342 - 2.5e-10 40.7 0.0 9.5e-10 38.8 0.0 1.9 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF148342 - 0.00027 20.4 0.2 0.00087 18.8 0.0 1.8 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain FERM_C PF09380.10 ORF148342 - 0.06 13.7 0.1 0.58 10.6 0.0 2.4 2 0 0 2 2 2 0 FERM C-terminal PH-like domain SbcCD_C PF13558.6 ORF148342 - 0.11 12.7 0.0 1.8 8.9 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Amino_oxidase PF01593.24 ORF147715 - 8.2e-18 64.9 0.4 1.4e-17 64.2 0.1 1.5 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase DUF3810 PF12725.7 ORF146218 - 6.7e-05 22.4 1.4 6.7e-05 22.4 1.4 2.3 1 1 0 2 2 2 1 Protein of unknown function (DUF3810) BRI3BP PF14965.6 ORF146218 - 0.00068 19.2 0.1 0.0016 17.9 0.1 1.6 1 0 0 1 1 1 1 Negative regulator of p53/TP53 DUF4472 PF14739.6 ORF146218 - 0.0049 17.6 0.7 0.023 15.4 0.7 2.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4472) LOH1CR12 PF10158.9 ORF146218 - 0.0059 16.6 14.2 0.15 12.1 4.7 2.8 3 0 0 3 3 3 2 Tumour suppressor protein THOC7 PF05615.13 ORF146218 - 0.0063 16.8 0.2 0.0063 16.8 0.2 2.7 3 1 0 3 3 3 1 Tho complex subunit 7 HEPN_AbiU2 PF18734.1 ORF146218 - 0.0087 15.6 0.2 0.0087 15.6 0.2 2.9 3 1 1 4 4 4 1 AbiU2 Apolipoprotein PF01442.18 ORF146218 - 0.014 15.3 0.4 4 7.3 0.9 2.4 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF146218 - 0.014 15.4 10.3 0.74 9.9 2.9 3.6 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Syntaxin-6_N PF09177.11 ORF146218 - 0.039 14.5 6.4 1.3 9.6 1.2 4.1 3 1 1 4 4 4 0 Syntaxin 6, N-terminal PspA_IM30 PF04012.12 ORF146218 - 0.087 12.4 0.9 0.2 11.2 0.9 1.6 1 0 0 1 1 1 0 PspA/IM30 family PMEI PF04043.15 ORF146218 - 0.11 12.9 3.1 0.12 12.7 0.8 2.2 2 1 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor YtxH PF12732.7 ORF146218 - 0.11 13.0 1.5 64 4.2 0.0 4.0 3 3 0 3 3 3 0 YtxH-like protein DivIC PF04977.15 ORF146218 - 0.23 11.2 2.0 1.1 9.0 0.3 2.6 1 1 1 2 2 2 0 Septum formation initiator Striatin PF08232.12 ORF146218 - 0.37 11.4 4.1 0.15 12.7 1.2 1.8 2 0 0 2 2 2 0 Striatin family FliD_N PF02465.18 ORF146218 - 0.56 10.9 5.0 18 6.1 0.1 3.8 3 1 1 4 4 4 0 Flagellar hook-associated protein 2 N-terminus DUF745 PF05335.13 ORF146218 - 0.8 9.4 3.5 0.87 9.3 0.5 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF745) LRRFIP PF09738.9 ORF146218 - 0.9 9.0 10.3 77 2.6 10.3 2.6 1 1 0 1 1 1 0 LRRFIP family TSC22 PF01166.18 ORF146218 - 1.1 9.6 7.8 3.2 8.1 0.3 3.7 2 2 2 4 4 4 0 TSC-22/dip/bun family TMPIT PF07851.13 ORF146218 - 1.6 7.9 13.6 0.018 14.3 2.4 2.9 2 1 1 3 3 3 0 TMPIT-like protein Ion_trans PF00520.31 ORF142832 - 0.0012 18.1 1.0 0.0017 17.6 1.0 1.2 1 0 0 1 1 1 1 Ion transport protein PIEZO PF15917.5 ORF142832 - 0.42 10.1 0.0 0.42 10.1 0.0 2.9 1 1 2 3 3 3 0 Piezo Ion_trans PF00520.31 ORF142831 - 6e-16 58.4 7.4 1.1e-15 57.6 7.4 1.3 1 0 0 1 1 1 1 Ion transport protein cNMP_binding PF00027.29 ORF142831 - 1.3e-13 50.8 0.0 2.3e-13 50.0 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain zf-CCHC PF00098.23 ORF142831 - 0.00011 22.1 0.2 0.00025 21.0 0.2 1.6 1 0 0 1 1 1 1 Zinc knuckle Ion_trans_2 PF07885.16 ORF142831 - 0.00025 20.9 10.0 0.00085 19.2 9.7 2.0 1 1 1 2 2 2 1 Ion channel Thiolase_N PF00108.23 ORF141789 - 1.1e-72 244.6 0.7 1.5e-72 244.1 0.7 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF141789 - 3.3e-47 159.2 0.5 1.4e-46 157.1 0.1 2.0 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF141789 - 0.0046 16.6 0.0 0.02 14.5 0.0 2.1 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III_C PF08541.10 ORF141789 - 0.0069 16.5 0.0 0.033 14.4 0.0 2.2 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Pkinase PF00069.25 ORF136325 - 2.9e-64 217.0 0.1 4.3e-64 216.4 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF136325 - 2e-28 99.4 0.0 3.2e-28 98.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF136325 - 0.045 13.1 0.0 0.083 12.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family MuF_C PF18819.1 ORF136325 - 0.54 10.3 3.2 0.41 10.6 1.0 1.9 2 0 0 2 2 2 0 Phage MuF-C-terminal domain AAA PF00004.29 ORF124707 - 5.8e-42 143.2 0.0 1e-41 142.5 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Vps4_C PF09336.10 ORF124707 - 4.8e-11 42.5 0.0 2.8e-10 40.0 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain MIT PF04212.18 ORF124707 - 2.6e-07 30.6 5.7 8.1e-07 29.0 5.7 1.9 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_lid_3 PF17862.1 ORF124707 - 4e-06 26.5 0.0 1.3e-05 24.9 0.0 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF124707 - 2.1e-05 25.0 0.0 0.00086 19.7 0.0 2.6 1 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF124707 - 7.5e-05 22.5 0.0 0.00014 21.7 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF124707 - 0.00021 21.3 0.0 0.00082 19.4 0.0 2.1 2 0 0 2 2 1 1 AAA domain AAA_5 PF07728.14 ORF124707 - 0.00036 20.5 0.0 0.0015 18.5 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF124707 - 0.00068 19.4 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_25 PF13481.6 ORF124707 - 0.0012 18.5 0.3 0.12 11.9 0.1 2.3 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 ORF124707 - 0.0015 18.7 0.0 0.0044 17.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF124707 - 0.0015 18.8 0.4 0.045 14.0 0.2 3.0 2 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 ORF124707 - 0.004 16.3 0.0 0.0067 15.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 ORF124707 - 0.0056 16.8 0.0 0.0099 16.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF124707 - 0.0073 16.7 0.0 0.024 15.0 0.0 2.0 1 0 0 1 1 1 1 RNA helicase AAA_18 PF13238.6 ORF124707 - 0.0074 16.8 0.0 0.019 15.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF124707 - 0.048 13.4 0.1 0.13 12.0 0.1 1.8 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF124707 - 0.05 13.3 0.0 0.66 9.7 0.0 2.3 1 1 0 1 1 1 0 Sigma-54 interaction domain Mg_chelatase PF01078.21 ORF124707 - 0.057 12.8 0.1 0.11 11.8 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 ORF124707 - 0.072 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain USP8_dimer PF08969.11 ORF124707 - 0.078 13.2 5.1 0.093 12.9 3.5 2.0 2 0 0 2 2 2 0 USP8 dimerisation domain CPT PF07931.12 ORF124707 - 0.14 12.0 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_7 PF12775.7 ORF124707 - 0.15 11.6 0.3 0.49 9.9 0.0 2.0 2 1 0 2 2 2 0 P-loop containing dynein motor region PhoH PF02562.16 ORF124707 - 0.15 11.5 0.1 0.26 10.7 0.1 1.5 1 1 0 1 1 1 0 PhoH-like protein ATPase_2 PF01637.18 ORF124707 - 0.47 10.3 3.2 2.8 7.8 0.0 2.8 2 1 1 3 3 3 0 ATPase domain predominantly from Archaea TPR_8 PF13181.6 ORF124707 - 0.69 10.3 3.9 0.37 11.1 0.3 2.6 3 0 0 3 3 1 0 Tetratricopeptide repeat Sec5 PF15469.6 ORF124707 - 1.2 8.9 3.8 25 4.6 2.2 2.3 2 0 0 2 2 2 0 Exocyst complex component Sec5 COX1 PF00115.20 ORF116793 - 1.7e-90 304.0 44.1 1.9e-90 303.8 44.1 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I s48_45 PF07422.13 ORF10871 - 0.0072 16.9 0.7 0.47 11.1 0.1 2.5 2 0 0 2 2 2 2 Sexual stage antigen s48/45 domain Myc_target_1 PF15179.6 ORF105996 - 0.05 13.5 2.7 0.89 9.4 0.1 2.5 2 0 0 2 2 2 0 Myc target protein 1 DUF3377 PF11857.8 ORF105996 - 0.074 13.0 0.0 0.074 13.0 0.0 4.7 4 1 1 5 5 5 0 Domain of unknown function (DUF3377) DUF1418 PF07214.12 ORF105996 - 0.14 12.1 0.0 0.14 12.1 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1418) Prefoldin_2 PF01920.20 ORF100886 - 0.0028 17.6 2.3 0.0028 17.6 2.3 4.4 3 2 3 6 6 6 1 Prefoldin subunit Fez1 PF06818.15 ORF100886 - 0.017 15.6 17.8 0.018 15.5 7.2 2.4 2 0 0 2 2 2 0 Fez1 Spc7 PF08317.11 ORF100886 - 0.09 11.6 28.2 0.098 11.5 10.0 2.6 1 1 1 2 2 2 0 Spc7 kinetochore protein COG2 PF06148.11 ORF100886 - 0.11 12.6 14.5 0.067 13.3 1.0 3.7 3 1 0 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 Golgin_A5 PF09787.9 ORF100886 - 0.48 9.8 22.2 0.7 9.3 11.1 2.3 2 0 0 2 2 2 0 Golgin subfamily A member 5 CorA PF01544.18 ORF100886 - 0.61 9.4 5.7 1.5 8.1 1.7 2.2 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein Exonuc_VII_L PF02601.15 ORF100886 - 0.68 9.5 16.9 0.77 9.3 8.7 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit Bacillus_HBL PF05791.11 ORF100886 - 0.69 9.7 9.9 0.15 11.9 1.8 2.6 2 0 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Baculo_PEP_C PF04513.12 ORF100886 - 0.69 10.0 11.4 1.8 8.6 0.7 3.5 3 2 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus ApoLp-III PF07464.11 ORF100886 - 0.76 9.9 18.8 0.041 14.0 5.8 3.1 3 1 0 3 3 3 0 Apolipophorin-III precursor (apoLp-III) Folliculin PF11704.8 ORF100886 - 1.5 8.7 6.9 0.61 9.9 1.8 2.2 2 0 0 2 2 2 0 Vesicle coat protein involved in Golgi to plasma membrane transport DUF4407 PF14362.6 ORF100886 - 1.5 8.1 32.6 0.2 11.0 6.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF812 PF05667.11 ORF100886 - 2.9 6.7 28.8 0.025 13.5 14.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Carbpep_Y_N PF05388.11 ORF100886 - 3.6 8.1 7.9 0.63 10.6 0.3 3.0 2 2 1 3 3 3 0 Carboxypeptidase Y pro-peptide BORCS8 PF10167.9 ORF100886 - 6.6 6.7 7.1 21 5.1 0.1 3.4 3 1 0 3 3 3 0 BLOC-1-related complex sub-unit 8 Jnk-SapK_ap_N PF09744.9 ORF100886 - 7.2 6.8 20.8 12 6.1 6.0 2.6 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 F_bP_aldolase PF01116.20 ORF100698 - 7e-86 288.2 0.0 8.2e-86 288.0 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II LRR_9 PF14580.6 ORF100535 - 9.1e-10 38.3 3.0 3.4e-09 36.4 2.9 1.8 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 ORF100535 - 1.2e-08 35.0 10.8 0.0011 19.3 0.8 3.6 1 1 1 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF100535 - 0.00013 21.6 16.8 0.0023 17.7 4.3 3.1 1 1 2 3 3 3 2 Leucine rich repeat DUF3314 PF11771.8 ORF100535 - 0.51 10.5 2.7 1 9.5 2.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3314) LRR_6 PF13516.6 ORF100535 - 2.1 8.6 8.8 39 4.6 0.0 4.0 4 0 0 4 4 4 0 Leucine Rich repeat DUF4188 PF13826.6 ORF84993 - 0.036 14.4 0.0 0.11 12.8 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4188) NFACT-R_1 PF05670.13 ORF82121 - 1.4e-10 41.7 0.0 6.7e-10 39.6 0.0 2.2 1 0 0 1 1 1 1 NFACT protein RNA binding domain Rotamase PF00639.21 ORF79226 - 6.8e-13 49.4 0.0 2.8e-11 44.2 0.0 2.5 2 0 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF79226 - 8.9e-12 45.6 0.0 2e-11 44.5 0.0 1.6 1 0 0 1 1 1 1 PPIC-type PPIASE domain DnaJ PF00226.31 ORF79226 - 3.1e-07 30.4 0.0 4.9e-06 26.6 0.0 2.7 3 0 0 3 3 3 1 DnaJ domain Rotamase_2 PF13145.6 ORF79226 - 0.006 17.4 1.5 0.42 11.4 0.0 2.9 3 0 0 3 3 3 1 PPIC-type PPIASE domain Nuc_sug_transp PF04142.15 ORF64000 - 1.2e-12 47.6 0.1 2.4e-12 46.7 0.1 1.4 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF64000 - 1.6e-07 31.5 24.5 0.00016 21.8 2.9 2.8 2 1 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 ORF64000 - 0.00058 19.2 9.2 0.00058 19.2 9.2 1.6 1 1 0 1 1 1 1 UAA transporter family TMEM234 PF10639.9 ORF64000 - 0.00067 19.7 1.0 0.0017 18.3 1.0 1.7 1 0 0 1 1 1 1 Putative transmembrane family 234 TPT PF03151.16 ORF64000 - 0.011 15.1 1.8 0.011 15.1 1.8 1.8 2 0 0 2 2 2 0 Triose-phosphate Transporter family PhaG_MnhG_YufB PF03334.14 ORF64000 - 0.012 15.8 1.8 0.012 15.8 1.8 3.9 3 1 1 4 4 4 0 Na+/H+ antiporter subunit DMT_6 PF04342.12 ORF64000 - 0.016 15.4 11.4 0.51 10.6 1.0 2.6 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) CRT-like PF08627.10 ORF64000 - 0.16 10.9 18.6 0.78 8.6 10.1 3.0 2 1 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like DUF3935 PF13071.6 ORF64000 - 2.7 8.6 11.6 0.25 11.9 1.3 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3935) Ank_2 PF12796.7 ORF60054 - 5.3e-11 43.0 0.2 5.6e-07 30.1 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF60054 - 3.2e-10 40.0 0.2 1.6e-06 28.2 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF60054 - 8.8e-10 38.9 0.1 1.3e-08 35.2 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF60054 - 1.7e-06 27.9 0.0 0.13 12.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF60054 - 4.3e-06 26.9 0.0 0.0084 16.5 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat RRM_1 PF00076.22 ORF60054 - 0.00058 19.6 0.0 0.0012 18.6 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MCM PF00493.23 ORF55232 - 7.4e-92 306.5 0.0 1e-91 306.0 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 ORF55232 - 3.8e-22 78.5 0.1 8.5e-22 77.4 0.1 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 ORF55232 - 5.3e-12 45.6 0.0 5.1e-08 32.5 0.0 2.7 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 ORF55232 - 6.1e-05 22.9 0.0 0.00016 21.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF55232 - 0.00023 21.2 0.0 0.0013 18.7 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 ORF55232 - 0.0023 17.7 0.1 0.85 9.3 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 ORF55232 - 0.0042 16.8 0.2 0.011 15.4 0.2 1.7 1 0 0 1 1 1 1 AAA domain DUF3987 PF13148.6 ORF55232 - 0.037 13.1 0.1 1.3 8.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) AAA_16 PF13191.6 ORF55232 - 0.061 13.7 0.6 0.31 11.4 0.6 2.5 1 1 0 1 1 1 0 AAA ATPase domain RuvB_N PF05496.12 ORF55232 - 0.085 12.6 0.3 0.66 9.7 0.3 2.4 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF55232 - 0.1 12.9 2.5 2.1 8.6 1.1 3.4 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 ORF55232 - 0.13 12.1 0.3 15 5.5 0.0 3.3 4 0 0 4 4 4 0 NACHT domain DnaI_N PF07319.11 ORF55232 - 0.26 12.0 3.0 8.7 7.1 0.2 3.4 1 1 3 4 4 4 0 Primosomal protein DnaI N-terminus DUF2838 PF10998.8 ORF52554 - 3.8e-23 81.8 11.9 3.8e-23 81.8 11.9 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF2838) MCM PF00493.23 ORF4927 - 7.4e-92 306.5 0.0 1e-91 306.0 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 ORF4927 - 3.8e-22 78.5 0.1 8.5e-22 77.4 0.1 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 ORF4927 - 5.3e-12 45.6 0.0 5.1e-08 32.5 0.0 2.7 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 ORF4927 - 6.1e-05 22.9 0.0 0.00016 21.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF4927 - 0.00023 21.2 0.0 0.0013 18.7 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 ORF4927 - 0.0023 17.7 0.1 0.85 9.3 0.0 2.3 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 ORF4927 - 0.0042 16.8 0.2 0.011 15.4 0.2 1.7 1 0 0 1 1 1 1 AAA domain DUF3987 PF13148.6 ORF4927 - 0.037 13.1 0.1 1.3 8.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) AAA_16 PF13191.6 ORF4927 - 0.061 13.7 0.6 0.31 11.4 0.6 2.5 1 1 0 1 1 1 0 AAA ATPase domain RuvB_N PF05496.12 ORF4927 - 0.085 12.6 0.3 0.66 9.7 0.3 2.4 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF4927 - 0.1 12.9 2.5 2.1 8.6 1.1 3.4 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 ORF4927 - 0.13 12.1 0.3 15 5.5 0.0 3.3 4 0 0 4 4 4 0 NACHT domain DnaI_N PF07319.11 ORF4927 - 0.26 12.0 3.0 8.7 7.1 0.2 3.4 1 1 3 4 4 4 0 Primosomal protein DnaI N-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks32.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks32.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks32.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks32.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NOD PF06816.13 ORF115327 - 0.021 14.5 0.2 0.03 14.0 0.2 1.2 1 0 0 1 1 1 0 NOTCH protein KIAA1430 PF13879.6 ORF115058 - 0.78 10.5 10.1 8.1 7.3 5.5 2.1 1 1 1 2 2 2 0 KIAA1430 homologue T2SSE PF00437.20 ORF114999 - 0.34 9.9 0.8 0.38 9.8 0.8 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein ACOX PF01756.19 ORF11418 - 0.11 12.0 0.2 0.12 11.9 0.2 1.1 1 0 0 1 1 1 0 Acyl-CoA oxidase AbiJ_NTD3 PF18860.1 ORF11418 - 0.15 11.5 0.1 0.17 11.4 0.1 1.1 1 0 0 1 1 1 0 AbiJ N-terminal domain 3 RMF PF04957.12 ORF113361 - 0.064 13.5 1.3 0.097 12.9 1.3 1.3 1 0 0 1 1 1 0 Ribosome modulation factor UL20 PF17582.2 ORF113188 - 0.35 10.1 4.4 0.29 10.4 4.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 Matrilin_ccoil PF10393.9 ORF112473 - 0.071 13.0 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin KASH_CCD PF14662.6 ORF112473 - 0.094 12.5 0.0 0.11 12.4 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH UL20 PF17582.2 ORF112411 - 0.35 10.1 4.4 0.29 10.4 4.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 TraL PF07178.11 ORF112106 - 0.066 13.7 0.3 0.078 13.4 0.3 1.1 1 0 0 1 1 1 0 TraL protein DUF2384 PF09722.10 ORF1120 - 0.16 12.1 0.0 2.2 8.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2384) Matrilin_ccoil PF10393.9 ORF111866 - 0.071 13.0 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin KASH_CCD PF14662.6 ORF111866 - 0.094 12.5 0.0 0.11 12.4 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DUF2061 PF09834.9 ORF111359 - 0.063 13.8 0.5 0.092 13.3 0.5 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2061) Paramyxo_P_V_N PF13825.6 ORF110814 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus DUF848 PF05852.11 ORF110376 - 0.066 13.3 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) MipZ PF09140.11 ORF110192 - 0.027 13.7 0.0 0.027 13.7 0.0 1.1 1 0 0 1 1 1 0 ATPase MipZ Thioredoxin_16 PF18569.1 ORF109917 - 0.072 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain Hydantoinase_B PF02538.14 ORF109917 - 0.13 10.6 0.0 0.13 10.6 0.0 1.0 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase Branch_AA_trans PF05525.13 ORF109635 - 0.17 10.7 1.6 0.2 10.5 1.6 1.0 1 0 0 1 1 1 0 Branched-chain amino acid transport protein MCM_lid PF17855.1 ORF109596 - 0.032 14.6 0.2 0.047 14.1 0.2 1.2 1 0 0 1 1 1 0 MCM AAA-lid domain zf-Tim10_DDP PF02953.15 ORF109301 - 6.6e-09 35.3 3.1 8.8e-09 34.9 3.1 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Atx10homo_assoc PF09759.9 ORF109301 - 0.054 13.5 0.2 0.059 13.4 0.2 1.1 1 0 0 1 1 1 0 Spinocerebellar ataxia type 10 protein domain Hormone_recep PF00104.30 ORF109301 - 0.1 12.2 0.8 0.12 12.0 0.8 1.0 1 0 0 1 1 1 0 Ligand-binding domain of nuclear hormone receptor PMD PF10536.9 ORF108951 - 0.04 13.0 0.0 0.042 13.0 0.0 1.0 1 0 0 1 1 1 0 Plant mobile domain DUF3342 PF11822.8 ORF108951 - 0.049 13.8 0.0 0.063 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3342) YbgT_YccB PF08173.11 ORF108951 - 0.071 13.2 0.2 0.071 13.2 0.2 1.7 2 0 0 2 2 2 0 Membrane bound YbgT-like protein RuvA_N PF01330.21 ORF108819 - 0.046 13.8 0.0 0.063 13.4 0.0 1.4 1 1 0 1 1 1 0 RuvA N terminal domain PHD_2 PF13831.6 ORF107555 - 0.019 14.5 0.5 0.019 14.5 0.5 2.1 2 0 0 2 2 2 0 PHD-finger MTA_R1 PF17226.2 ORF107555 - 0.053 13.7 0.0 0.069 13.3 0.0 1.3 1 0 0 1 1 1 0 MTA R1 domain Ketoacyl-synt_C PF02801.22 ORF107555 - 0.056 13.5 0.1 0.096 12.7 0.1 1.4 1 1 1 2 2 2 0 Beta-ketoacyl synthase, C-terminal domain Pep1_7 PF17232.2 ORF107544 - 0.17 12.4 11.1 0.47 10.9 11.1 1.7 1 1 0 1 1 1 0 Elicitor peptide 1-7 CNDH2_M PF16869.5 ORF107544 - 0.34 11.6 3.1 0.4 11.4 3.1 1.1 1 0 0 1 1 1 0 PF16858 CCDC106 PF15794.5 ORF107544 - 2 8.1 7.7 2.1 8.0 7.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RSRP PF17069.5 ORF107544 - 7.8 6.0 20.9 8.7 5.8 20.9 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Myb_DNA-bind_5 PF13873.6 ORF106421 - 0.025 14.6 2.1 0.032 14.3 2.1 1.1 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain DUF4996 PF16387.5 ORF106015 - 0.028 14.9 0.0 0.031 14.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function Gp-FAR-1 PF05823.12 ORF105591 - 0.034 14.5 1.0 0.039 14.3 1.0 1.1 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) OAF PF14941.6 ORF105222 - 0.11 11.9 4.3 0.14 11.6 4.3 1.1 1 0 0 1 1 1 0 Transcriptional regulator, Out at first Thioredoxin_8 PF13905.6 ORF105158 - 0.015 15.6 0.1 0.024 15.0 0.1 1.4 1 1 0 1 1 1 0 Thioredoxin-like ERGIC_N PF13850.6 ORF104946 - 0.031 14.6 0.2 0.037 14.4 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) T4SS_CagC PF16943.5 ORF104946 - 0.065 13.4 0.0 0.073 13.3 0.0 1.1 1 0 0 1 1 1 0 Cag pathogenicity island, type IV secretory system DUF5053 PF16476.5 ORF104946 - 0.099 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5053) DUF4232 PF14016.6 ORF104577 - 0.0073 16.4 0.0 0.0086 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4232) FlhD PF05247.13 ORF103638 - 0.087 13.1 0.0 0.093 13.0 0.0 1.1 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) Phage_holin_3_6 PF07332.11 ORF103144 - 4.2e-12 46.1 3.0 4.6e-12 46.0 3.0 1.0 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III TMEM220 PF15071.6 ORF103144 - 0.018 15.8 0.1 0.021 15.5 0.1 1.1 1 0 0 1 1 1 0 Transmembrane family 220, helix DUF3043 PF11241.8 ORF103144 - 0.02 14.9 0.9 0.021 14.8 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Tetraspanin PF00335.20 ORF103144 - 0.078 12.7 2.0 0.09 12.5 2.0 1.1 1 0 0 1 1 1 0 Tetraspanin family FixQ PF05545.11 ORF103144 - 0.096 12.7 1.3 0.44 10.6 0.0 2.1 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ DUF373 PF04123.13 ORF103144 - 0.1 12.0 0.3 0.11 11.9 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) FtsX PF02687.21 ORF103144 - 0.15 12.5 4.1 0.19 12.2 4.1 1.2 1 0 0 1 1 1 0 FtsX-like permease family CCB1 PF12046.8 ORF103144 - 0.32 10.3 2.8 0.22 10.8 0.2 1.8 1 1 1 2 2 2 0 Cofactor assembly of complex C subunit B DUF4131 PF13567.6 ORF103144 - 0.32 10.6 2.4 0.33 10.6 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF983 PF06170.12 ORF103144 - 0.37 11.2 3.0 0.45 10.9 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF983) Phage_Gp23 PF10669.9 ORF103144 - 1.9 8.8 4.2 1.2 9.5 0.1 1.9 1 1 1 2 2 2 0 Protein gp23 (Bacteriophage A118) SieB PF14163.6 ORF10243 - 0.72 9.3 4.5 0.83 9.1 4.5 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B ERGIC_N PF13850.6 ORF101107 - 0.003 17.9 0.3 0.0034 17.7 0.3 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Pertussis_S2S3 PF02918.15 ORF101107 - 0.046 13.7 0.0 0.058 13.3 0.0 1.2 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain Diphthamide_syn PF01866.17 NODE_66341_length_241_cov_1.043689_g58400_i0forward_frame_1 - 0.058 12.8 0.5 0.061 12.8 0.5 1.0 1 0 0 1 1 1 0 Putative diphthamide synthesis protein RdRP PF05183.12 NODE_66339_length_241_cov_1.063107_g58398_i0reverse_frame_1 - 6.2e-09 35.0 0.0 6.5e-09 35.0 0.0 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase DUF508 PF04370.12 NODE_66339_length_241_cov_1.063107_g58398_i0forward_frame_1 - 0.083 12.6 0.2 0.092 12.5 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF508) Aa_trans PF01490.18 NODE_66337_length_241_cov_1.140777_g58396_i0reverse_frame_1 - 7.3e-06 24.9 0.4 7.7e-06 24.9 0.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein YesK PF14150.6 NODE_66335_length_241_cov_1.155340_g58394_i0reverse_frame_1 - 0.042 14.0 0.1 0.17 12.1 0.0 1.8 1 1 1 2 2 2 0 YesK-like protein DLP_helical PF18709.1 NODE_66322_length_241_cov_1.325243_g58381_i0forward_frame_1 - 0.014 14.6 0.3 0.047 12.9 0.3 1.8 1 1 0 1 1 1 0 Dynamin-like helical domain Pox_polyA_pol_N PF12630.7 NODE_66322_length_241_cov_1.325243_g58381_i0forward_frame_1 - 0.097 13.0 0.9 0.19 12.1 0.9 1.6 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain Poty_PP PF08440.10 NODE_66321_length_241_cov_1.344660_g58380_i0forward_frame_1 - 0.062 12.4 0.0 0.085 11.9 0.0 1.3 1 1 0 1 1 1 0 Potyviridae polyprotein Branch PF02485.21 NODE_66320_length_241_cov_1.344660_g58379_i0reverse_frame_1 - 0.059 12.9 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 Core-2/I-Branching enzyme DUF2710 PF10921.8 NODE_66320_length_241_cov_1.344660_g58379_i0reverse_frame_1 - 0.063 13.7 0.0 0.065 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2710) DUF1467 PF07330.12 NODE_66320_length_241_cov_1.344660_g58379_i0forward_frame_1 - 2 8.4 4.9 5 7.1 2.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1467) BioY PF02632.14 NODE_66319_length_241_cov_1.354369_g58378_i0forward_frame_1 - 0.11 12.5 0.9 0.13 12.3 0.2 1.4 2 0 0 2 2 2 0 BioY family TMEM247 PF15444.6 NODE_66310_length_241_cov_1.402913_g58369_i0reverse_frame_1 - 1.1 9.2 3.7 1.2 9.1 3.7 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 hEGF PF12661.7 NODE_66306_length_241_cov_1.427184_g58365_i0forward_frame_1 - 0.63 10.8 11.8 1.1 10.0 2.0 2.7 2 0 0 2 2 2 0 Human growth factor-like EGF Med19 PF10278.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_1 - 1.4 8.8 11.4 1.7 8.5 11.4 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Rrn6 PF10214.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_1 - 3.2 6.1 7.4 3 6.2 7.4 1.2 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Spem1 PF15670.5 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_1 - 9.3 5.7 15.0 11 5.5 15.0 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 SelK_SelG PF10961.8 NODE_66303_length_241_cov_1.446602_g58362_i0forward_frame_1 - 1.7 9.3 4.5 2 9.1 4.5 1.3 1 0 0 1 1 1 0 Selenoprotein SelK_SelG DUF390 PF04094.14 NODE_66303_length_241_cov_1.446602_g58362_i0forward_frame_1 - 4.6 5.4 5.8 5.2 5.2 5.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) NCD3G PF07562.14 NODE_66302_length_241_cov_1.446602_g58361_i0forward_frame_1 - 8 6.5 14.9 47 4.0 13.8 2.1 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR 5_nucleotid_C PF02872.18 NODE_66299_length_241_cov_1.480583_g58358_i0reverse_frame_1 - 5.7e-13 49.4 0.0 5.7e-13 49.4 0.0 1.0 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain Orai-1 PF07856.12 NODE_66295_length_241_cov_1.509709_g58354_i0forward_frame_1 - 0.033 13.9 1.9 0.063 13.0 1.9 1.4 1 1 0 1 1 1 0 Mediator of CRAC channel activity BatA PF07584.11 NODE_66293_length_241_cov_1.529126_g58352_i0reverse_frame_1 - 0.079 13.3 1.6 0.11 12.9 0.1 1.8 2 0 0 2 2 2 0 Aerotolerance regulator N-terminal UreE_N PF02814.15 NODE_66283_length_241_cov_1.611650_g58342_i0forward_frame_1 - 0.055 13.1 1.0 0.081 12.5 1.0 1.2 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain TIL PF01826.17 NODE_66276_length_241_cov_1.718447_g58335_i0reverse_frame_1 - 0.082 13.2 2.8 0.15 12.3 2.9 1.5 1 1 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain LytB_WW PF18342.1 NODE_66275_length_241_cov_1.723301_g58334_i0forward_frame_1 - 0.09 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Endo-beta-N-acetylglucosaminidase LytB WW domain E7 PF00527.18 NODE_66270_length_241_cov_1.800971_g58329_i0forward_frame_1 - 0.063 13.5 1.1 0.078 13.2 1.1 1.2 1 0 0 1 1 1 0 E7 protein, Early protein DnaJ PF00226.31 NODE_66267_length_241_cov_1.810680_g58326_i0reverse_frame_1 - 1.4e-07 31.5 0.2 2.2e-07 30.9 0.2 1.2 1 0 0 1 1 1 1 DnaJ domain Med6 PF04934.14 NODE_66266_length_241_cov_1.810680_g58325_i0reverse_frame_1 - 0.04 13.7 1.0 0.25 11.1 0.2 1.9 1 1 1 2 2 2 0 MED6 mediator sub complex component DUF3137 PF11335.8 NODE_66266_length_241_cov_1.810680_g58325_i0reverse_frame_1 - 0.055 13.4 0.2 0.071 13.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3137) DUF1658 PF07871.11 NODE_66263_length_241_cov_1.864078_g58322_i0reverse_frame_1 - 0.089 12.7 0.2 0.2 11.6 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1658) Nodulin_late PF07127.11 NODE_66262_length_241_cov_1.868932_g58321_i0forward_frame_1 - 0.042 14.2 3.3 0.062 13.6 3.3 1.3 1 0 0 1 1 1 0 Late nodulin protein CASP_C PF08172.12 NODE_66262_length_241_cov_1.868932_g58321_i0forward_frame_1 - 1.6 8.0 5.2 0.79 9.0 2.8 1.6 1 1 1 2 2 2 0 CASP C terminal PspB PF06667.12 NODE_66256_length_241_cov_1.912621_g58315_i0forward_frame_1 - 0.91 9.6 4.5 1.1 9.4 4.1 1.4 1 1 0 1 1 1 0 Phage shock protein B ABC_tran PF00005.27 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 3e-09 37.5 0.2 3.3e-09 37.4 0.2 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 8.3e-05 22.3 0.4 9.4e-05 22.1 0.4 1.3 1 1 0 1 1 1 1 P-loop containing region of AAA domain Dynamin_N PF00350.23 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.00029 21.0 0.1 0.00034 20.7 0.1 1.1 1 0 0 1 1 1 1 Dynamin family AAA_23 PF13476.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.00035 21.1 0.4 0.00035 21.1 0.4 1.1 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.00052 19.5 0.1 0.00052 19.5 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF87 PF01935.17 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0012 19.0 0.1 0.0012 19.0 0.1 1.1 1 0 0 1 1 1 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0013 18.2 0.0 0.0015 18.0 0.0 1.1 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_15 PF13175.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0016 18.3 0.7 0.0017 18.1 0.7 1.1 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0017 18.3 0.1 0.0018 18.2 0.1 1.1 1 0 0 1 1 1 1 RsgA GTPase Roc PF08477.13 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0018 18.5 0.0 0.0024 18.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0026 17.8 0.1 0.0034 17.5 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AIG1 PF04548.16 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0042 16.5 0.1 0.0054 16.1 0.1 1.1 1 0 0 1 1 1 1 AIG1 family AAA_7 PF12775.7 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.0074 15.8 0.0 0.0086 15.6 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_25 PF13481.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.013 15.1 0.0 0.014 14.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.035 14.5 0.0 0.035 14.5 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.042 14.2 0.0 0.054 13.9 0.0 1.2 1 0 0 1 1 1 0 RNA helicase AAA_21 PF13304.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.047 13.5 0.2 0.048 13.5 0.2 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_10 PF12846.7 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.062 12.2 0.0 0.067 12.1 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain Pox_A32 PF04665.12 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.067 12.6 0.0 0.069 12.6 0.0 1.1 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_27 PF13514.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.075 12.6 0.0 0.083 12.5 0.0 1.0 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.077 12.2 0.0 0.084 12.0 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain Ras PF00071.22 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.079 12.6 0.0 0.093 12.3 0.0 1.1 1 0 0 1 1 1 0 Ras family AAA_19 PF13245.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.11 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain SH3_2 PF07653.17 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.11 12.2 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Variant SH3 domain NACHT PF05729.12 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 NACHT domain DUF2075 PF09848.9 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.13 11.4 0.0 0.15 11.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.14 12.2 0.2 3.1 7.8 0.0 1.9 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit AAA_22 PF13401.6 NODE_66247_length_241_cov_2.004854_g58306_i0reverse_frame_1 - 0.15 12.3 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain Claudin_3 PF06653.11 NODE_66246_length_241_cov_2.009709_g58305_i0forward_frame_1 - 0.012 15.5 3.4 0.014 15.3 3.4 1.1 1 0 0 1 1 1 0 Tight junction protein, Claudin-like DUF5553 PF17707.1 NODE_66244_length_241_cov_2.024272_g58303_i0forward_frame_1 - 0.068 12.6 1.5 0.49 9.8 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5553) DUF2057 PF09829.9 NODE_66242_length_241_cov_2.043689_g58301_i0reverse_frame_1 - 0.0012 19.1 0.0 0.0012 19.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2057) DUF5488 PF17590.2 NODE_66232_length_241_cov_2.276699_g58291_i0reverse_frame_1 - 0.072 12.8 0.1 0.084 12.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5488) zf-DBF PF07535.12 NODE_66229_length_241_cov_2.320388_g58288_i0reverse_frame_1 - 0.031 14.4 0.4 0.046 13.8 0.4 1.3 1 0 0 1 1 1 0 DBF zinc finger DUF4354 PF14263.6 NODE_66229_length_241_cov_2.320388_g58288_i0reverse_frame_1 - 0.076 12.8 0.0 0.096 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) 7TM_GPCR_Srv PF10323.9 NODE_66209_length_241_cov_2.728155_g58268_i0forward_frame_1 - 0.00069 19.1 1.0 0.00079 18.9 1.0 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srv MukB PF04310.12 NODE_66207_length_241_cov_2.742718_g58266_i0forward_frame_1 - 7e-13 48.9 0.2 8.4e-13 48.6 0.2 1.1 1 0 0 1 1 1 1 MukB N-terminal GRASP55_65 PF04495.14 NODE_66197_length_241_cov_3.111650_g58256_i0forward_frame_1 - 4.2e-09 36.9 0.0 4.5e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain PDZ_6 PF17820.1 NODE_66197_length_241_cov_3.111650_g58256_i0forward_frame_1 - 0.00074 19.3 0.0 0.00095 19.0 0.0 1.2 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 NODE_66197_length_241_cov_3.111650_g58256_i0forward_frame_1 - 0.0067 16.7 0.0 0.0073 16.6 0.0 1.2 1 0 0 1 1 1 1 PDZ domain ALAD PF00490.21 NODE_66197_length_241_cov_3.111650_g58256_i0forward_frame_1 - 0.14 11.3 0.1 0.14 11.3 0.1 1.0 1 0 0 1 1 1 0 Delta-aminolevulinic acid dehydratase FAM222A PF15258.6 NODE_66197_length_241_cov_3.111650_g58256_i0forward_frame_1 - 0.25 10.4 0.0 0.26 10.4 0.0 1.0 1 0 0 1 1 1 0 Protein family of FAM222A DUF2076 PF09849.9 NODE_66185_length_241_cov_28.631068_g58244_i0reverse_frame_1 - 0.015 15.4 0.4 0.017 15.2 0.4 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) Connexin PF00029.19 NODE_66183_length_241_cov_31.567961_g58242_i0reverse_frame_1 - 0.16 11.7 0.2 0.16 11.7 0.2 1.1 1 0 0 1 1 1 0 Connexin zf-RING_11 PF17123.5 NODE_66181_length_241_cov_33.121359_g58240_i0reverse_frame_1 - 0.062 13.1 0.3 0.11 12.2 0.3 1.4 1 0 0 1 1 1 0 RING-like zinc finger CCAP PF11105.8 NODE_66176_length_241_cov_42.383495_g58235_i0forward_frame_1 - 0.053 13.5 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a FerB PF08150.12 NODE_66175_length_241_cov_47.495146_g58234_i0forward_frame_1 - 0.12 12.9 0.2 0.25 12.0 0.1 1.5 2 0 0 2 2 2 0 FerB (NUC096) domain PsbN PF02468.15 NODE_66164_length_241_cov_63.592233_g58223_i0reverse_frame_1 - 0.27 11.1 0.8 0.4 10.6 0.8 1.2 1 0 0 1 1 1 0 Photosystem II reaction centre N protein (psbN) NUC130_3NT PF08158.12 NODE_66158_length_241_cov_67.922330_g58217_i0forward_frame_1 - 0.042 14.2 0.0 0.084 13.2 0.0 1.5 2 0 0 2 2 2 0 NUC130/3NT domain Phe_ZIP PF08916.11 NODE_66156_length_241_cov_73.854369_g58215_i0reverse_frame_1 - 0.4 11.4 7.8 1.4 9.7 1.3 2.1 2 0 0 2 2 2 0 Phenylalanine zipper Sel_put PF04328.13 NODE_66156_length_241_cov_73.854369_g58215_i0reverse_frame_1 - 0.62 10.1 21.8 0.1 12.6 13.2 2.3 1 1 1 2 2 2 0 Selenoprotein, putative RCC1_2 PF13540.6 NODE_66156_length_241_cov_73.854369_g58215_i0forward_frame_1 - 9e-05 22.2 0.3 0.1 12.4 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat Med7 PF05983.11 NODE_66152_length_241_cov_85.645631_g58211_i0forward_frame_1 - 0.082 13.0 0.3 0.11 12.5 0.3 1.1 1 0 0 1 1 1 0 MED7 protein SHR3_chaperone PF08229.11 NODE_66147_length_241_cov_98.116505_g58206_i0forward_frame_1 - 0.53 9.2 2.5 0.67 8.9 2.5 1.2 1 0 0 1 1 1 0 ER membrane protein SH3 p12I PF12233.8 NODE_66140_length_241_cov_139.936893_g58199_i0forward_frame_1 - 0.15 12.6 1.1 0.18 12.3 1.1 1.1 1 0 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein Ery_res_leader1 PF08051.11 NODE_66135_length_241_cov_163.966019_g58194_i0forward_frame_1 - 0.12 12.4 0.1 0.25 11.5 0.1 1.5 1 0 0 1 1 1 0 Erythromycin resistance leader peptide PheRS_DBD2 PF18554.1 NODE_66128_length_241_cov_417.830097_g58187_i0reverse_frame_1 - 0.22 11.5 4.2 2.8 8.0 0.6 2.1 2 0 0 2 2 2 0 PheRS DNA binding domain 2 DUF5560 PF17715.1 NODE_66111_length_242_cov_1.043478_g58170_i0forward_frame_1 - 0.26 10.7 8.7 0.34 10.3 8.7 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5560) Zn_Tnp_IS91 PF14319.6 NODE_66097_length_242_cov_1.159420_g58156_i0reverse_frame_1 - 0.075 13.1 5.1 0.1 12.6 5.1 1.3 1 0 0 1 1 1 0 Transposase zinc-binding domain DUF4348 PF14254.6 NODE_66094_length_242_cov_1.193237_g58153_i0reverse_frame_1 - 0.0035 16.8 1.6 0.004 16.6 1.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4348) Glutaredoxin2_C PF04399.13 NODE_66094_length_242_cov_1.193237_g58153_i0reverse_frame_1 - 0.059 13.2 1.7 0.08 12.8 1.7 1.3 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain BNIP2 PF12496.8 NODE_66094_length_242_cov_1.193237_g58153_i0reverse_frame_1 - 0.073 13.5 3.0 0.074 13.5 3.0 1.1 1 0 0 1 1 1 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 Endosulfine PF04667.17 NODE_66090_length_242_cov_1.299517_g58149_i0forward_frame_1 - 0.069 13.3 0.1 0.099 12.8 0.1 1.3 1 0 0 1 1 1 0 cAMP-regulated phosphoprotein/endosulfine conserved region DUF4220 PF13968.6 NODE_66085_length_242_cov_1.333333_g58144_i0forward_frame_1 - 0.053 12.9 0.5 0.075 12.4 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) Med19 PF10278.9 NODE_66079_length_242_cov_1.463768_g58138_i0forward_frame_1 - 1.5 8.7 9.3 1.9 8.4 9.3 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Pkinase PF00069.25 NODE_66077_length_242_cov_1.478261_g58136_i0reverse_frame_1 - 9.3e-21 74.4 0.0 1e-20 74.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_66077_length_242_cov_1.478261_g58136_i0reverse_frame_1 - 2.7e-10 40.0 0.0 3.1e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase HATPase_c PF02518.26 NODE_66071_length_242_cov_1.507246_g58130_i0forward_frame_1 - 4.9e-07 30.2 0.1 6e-07 30.0 0.1 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF2142 PF09913.9 NODE_66070_length_242_cov_1.507246_g58129_i0reverse_frame_1 - 0.043 12.7 0.1 0.046 12.6 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) OTT_1508_deam PF14441.6 NODE_66070_length_242_cov_1.507246_g58129_i0reverse_frame_1 - 0.75 9.8 6.3 0.98 9.5 6.3 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase Inj_translocase PF16928.5 NODE_66069_length_242_cov_1.512077_g58128_i0forward_frame_1 - 0.036 13.5 0.0 0.04 13.4 0.0 1.0 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome TPK_catalytic PF04263.16 NODE_66069_length_242_cov_1.512077_g58128_i0forward_frame_1 - 0.097 12.7 0.2 0.15 12.2 0.1 1.3 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain Borrelia_orfD PF02999.14 NODE_66066_length_242_cov_1.536232_g58125_i0forward_frame_1 - 0.03 14.6 0.1 0.034 14.5 0.1 1.2 1 0 0 1 1 1 0 Borrelia orf-D family Sec7 PF01369.20 NODE_66059_length_242_cov_1.594203_g58118_i0reverse_frame_1 - 0.012 15.3 0.6 0.012 15.3 0.6 1.1 1 0 0 1 1 1 0 Sec7 domain Caps_synth PF05704.12 NODE_66059_length_242_cov_1.594203_g58118_i0reverse_frame_1 - 0.037 13.4 0.7 0.042 13.2 0.7 1.0 1 0 0 1 1 1 0 Capsular polysaccharide synthesis protein DUF1673 PF07895.11 NODE_66059_length_242_cov_1.594203_g58118_i0forward_frame_1 - 0.019 14.7 2.4 0.021 14.6 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) PARG_cat PF05028.14 NODE_66059_length_242_cov_1.594203_g58118_i0forward_frame_1 - 0.051 12.9 0.6 0.057 12.7 0.6 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) Pkinase PF00069.25 NODE_66057_length_242_cov_1.637681_g58116_i0reverse_frame_1 - 1.6e-14 53.9 0.2 1.6e-14 53.9 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_66057_length_242_cov_1.637681_g58116_i0reverse_frame_1 - 4.1e-10 39.4 0.1 4.3e-10 39.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Tetraspanin PF00335.20 NODE_66057_length_242_cov_1.637681_g58116_i0forward_frame_1 - 0.02 14.6 4.1 0.021 14.5 4.1 1.0 1 0 0 1 1 1 0 Tetraspanin family CEBP_ZZ PF16366.5 NODE_66051_length_242_cov_1.705314_g58110_i0forward_frame_1 - 1.2 9.4 7.9 0.49 10.7 2.7 2.1 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain Nod1 PF17114.5 NODE_66044_length_242_cov_1.821256_g58103_i0reverse_frame_1 - 0.078 13.1 0.3 0.099 12.8 0.3 1.2 1 1 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 Adipogenin PF15202.6 NODE_66044_length_242_cov_1.821256_g58103_i0reverse_frame_1 - 0.18 11.9 1.8 0.22 11.6 1.3 1.4 1 1 0 1 1 1 0 Adipogenin Pox_D3 PF04580.13 NODE_66042_length_242_cov_1.850242_g58101_i0reverse_frame_1 - 0.011 15.3 2.4 0.013 15.2 2.4 1.0 1 0 0 1 1 1 0 Chordopoxvirinae D3 protein CoxIIa PF08113.11 NODE_66039_length_242_cov_1.893720_g58098_i0reverse_frame_1 - 0.09 12.6 5.3 0.24 11.2 5.3 1.8 1 1 0 1 1 1 0 Cytochrome c oxidase subunit IIa family MarR PF01047.22 NODE_66037_length_242_cov_1.922705_g58096_i0forward_frame_1 - 0.018 14.9 0.1 0.025 14.5 0.1 1.3 1 0 0 1 1 1 0 MarR family SNAD4 PF18750.1 NODE_66035_length_242_cov_2.019324_g58094_i0forward_frame_1 - 0.021 15.0 0.1 0.029 14.5 0.1 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 VGLL4 PF15245.6 NODE_66029_length_242_cov_2.120773_g58088_i0reverse_frame_1 - 0.083 13.0 2.0 0.088 12.9 2.0 1.1 1 0 0 1 1 1 0 Transcription cofactor vestigial-like protein 4 EamA PF00892.20 NODE_66029_length_242_cov_2.120773_g58088_i0forward_frame_1 - 3.3e-05 24.1 8.9 0.0084 16.3 1.5 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 NODE_66029_length_242_cov_2.120773_g58088_i0forward_frame_1 - 0.0024 17.3 2.7 0.023 14.1 2.7 1.9 1 1 0 1 1 1 1 Triose-phosphate Transporter family EmrE PF13536.6 NODE_66029_length_242_cov_2.120773_g58088_i0forward_frame_1 - 0.014 15.0 0.3 0.014 15.0 0.3 1.0 1 0 0 1 1 1 0 Putative multidrug resistance efflux transporter Sharpin_PH PF16764.5 NODE_66017_length_242_cov_2.531401_g58076_i0forward_frame_1 - 0.044 13.5 0.1 4 7.2 0.2 2.0 1 1 1 2 2 2 0 Sharpin PH domain zf-HIT PF04438.16 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_1 - 0.1 12.5 2.4 1.7 8.6 0.1 2.2 2 0 0 2 2 2 0 HIT zinc finger Pkinase PF00069.25 NODE_65989_length_242_cov_14.367150_g58048_i0forward_frame_1 - 0.011 15.1 0.0 0.013 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain SR-25 PF10500.9 NODE_65986_length_242_cov_22.512077_g58045_i0forward_frame_1 - 0.0075 15.9 11.0 0.0075 15.9 11.0 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_65986_length_242_cov_22.512077_g58045_i0forward_frame_1 - 0.093 13.4 8.2 0.11 13.2 8.2 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_65985_length_242_cov_26.560386_g58044_i0forward_frame_1 - 0.31 10.6 5.6 0.32 10.6 5.6 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HGAL PF15666.5 NODE_65981_length_242_cov_34.685990_g58040_i0reverse_frame_1 - 0.069 13.3 0.3 0.083 13.0 0.3 1.2 1 0 0 1 1 1 0 Germinal center-associated lymphoma Phage_G PF02306.15 NODE_65978_length_242_cov_39.217391_g58037_i0forward_frame_1 - 0.052 13.3 0.0 0.057 13.1 0.0 1.2 1 0 0 1 1 1 0 Major spike protein (G protein) NTP_transf_2 PF01909.23 NODE_65973_length_242_cov_47.502415_g58032_i0forward_frame_1 - 5.4e-06 26.6 0.0 6e-06 26.5 0.0 1.3 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 NODE_65973_length_242_cov_47.502415_g58032_i0forward_frame_1 - 0.0003 20.8 0.3 0.0011 19.0 0.1 1.8 1 1 1 2 2 2 1 Polymerase beta, Nucleotidyltransferase FixQ PF05545.11 NODE_65970_length_242_cov_51.565217_g58029_i0forward_frame_1 - 0.43 10.6 0.1 0.43 10.6 0.1 2.0 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ DUF1138 PF06592.13 NODE_65961_length_242_cov_61.014493_g58020_i0reverse_frame_1 - 0.074 13.1 0.2 0.1 12.7 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1138) zf-Tim10_DDP PF02953.15 NODE_65959_length_242_cov_61.512077_g58018_i0forward_frame_1 - 0.00055 19.5 1.3 0.00071 19.2 1.3 1.2 1 0 0 1 1 1 1 Tim10/DDP family zinc finger CCDC-167 PF15188.6 NODE_65955_length_242_cov_67.227053_g58014_i0reverse_frame_1 - 0.19 12.1 7.0 0.27 11.6 7.0 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF2677 PF10838.8 NODE_65951_length_242_cov_72.173913_g58010_i0forward_frame_1 - 0.013 15.4 0.1 0.015 15.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2677) Tetrabrachion PF11401.8 NODE_65951_length_242_cov_72.173913_g58010_i0forward_frame_1 - 0.035 14.1 0.0 0.049 13.6 0.0 1.2 1 0 0 1 1 1 0 Tetrabrachion Defensin_big PF14862.6 NODE_65950_length_242_cov_72.975845_g58009_i0forward_frame_1 - 1.1 9.7 8.0 1.2 9.5 7.4 1.5 1 1 1 2 2 2 0 Big defensin TRAM_LAG1_CLN8 PF03798.16 NODE_65947_length_242_cov_80.381643_g58006_i0forward_frame_1 - 0.027 14.2 0.2 0.027 14.2 0.2 1.1 1 0 0 1 1 1 0 TLC domain GBP_PSP PF02425.15 NODE_65937_length_242_cov_117.473430_g57996_i0forward_frame_1 - 0.036 13.7 2.8 0.036 13.7 2.8 2.2 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Nucleoside_tran PF01733.18 NODE_65935_length_242_cov_128.487923_g57994_i0forward_frame_1 - 8.4e-11 41.8 0.7 9.3e-11 41.7 0.7 1.0 1 0 0 1 1 1 1 Nucleoside transporter zinc_ribbon_9 PF14369.6 NODE_65927_length_242_cov_202.801932_g57986_i0forward_frame_1 - 0.1 12.9 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 zinc-ribbon LEAP-2 PF07359.11 NODE_65919_length_242_cov_365.550725_g57978_i0forward_frame_1 - 0.1 12.4 0.4 0.12 12.2 0.4 1.3 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Ribosomal_S30 PF04758.14 NODE_65918_length_242_cov_421.526570_g57977_i0forward_frame_1 - 2e-16 59.9 5.2 3.1e-16 59.3 5.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S30 Ndc80_HEC PF03801.13 NODE_65905_length_243_cov_1.052885_g57964_i0reverse_frame_1 - 0.023 14.3 0.0 0.023 14.3 0.0 1.1 1 0 0 1 1 1 0 HEC/Ndc80p family Mhr1 PF12829.7 NODE_65905_length_243_cov_1.052885_g57964_i0forward_frame_1 - 0.13 12.3 0.7 0.45 10.6 0.1 1.8 1 1 1 2 2 2 0 Transcriptional regulation of mitochondrial recombination Lamprin PF06403.11 NODE_65903_length_243_cov_1.091346_g57962_i0forward_frame_1 - 0.0096 15.9 3.3 0.31 11.0 0.2 2.1 1 1 1 2 2 2 2 Lamprin DUF2960 PF11173.8 NODE_65903_length_243_cov_1.091346_g57962_i0forward_frame_1 - 0.35 11.3 4.2 9.2 6.8 0.4 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2960) MarB PF13999.6 NODE_65902_length_243_cov_1.129808_g57961_i0forward_frame_1 - 0.13 12.1 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 MarB protein Prenyltrans PF00432.21 NODE_65900_length_243_cov_1.149038_g57959_i0forward_frame_1 - 0.065 13.0 1.8 0.11 12.3 1.8 1.4 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat ERGIC_N PF13850.6 NODE_65898_length_243_cov_1.149038_g57957_i0reverse_frame_1 - 0.0078 16.5 3.1 0.0092 16.3 3.1 1.3 1 1 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4083 PF13314.6 NODE_65898_length_243_cov_1.149038_g57957_i0reverse_frame_1 - 0.021 14.8 1.1 0.033 14.1 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) MscL PF01741.18 NODE_65898_length_243_cov_1.149038_g57957_i0reverse_frame_1 - 0.047 14.0 0.1 0.049 13.9 0.1 1.1 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL COX4 PF02936.14 NODE_65898_length_243_cov_1.149038_g57957_i0reverse_frame_1 - 0.11 12.5 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV SSP160 PF06933.11 NODE_65895_length_243_cov_1.153846_g57954_i0reverse_frame_1 - 0.0012 17.2 0.6 0.0014 16.9 0.6 1.0 1 0 0 1 1 1 1 Special lobe-specific silk protein SSP160 zf-C3HC4_4 PF15227.6 NODE_65885_length_243_cov_1.336538_g57944_i0forward_frame_1 - 0.053 13.7 0.8 0.053 13.7 0.8 1.6 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING Phage_integrase PF00589.22 NODE_65883_length_243_cov_1.341346_g57942_i0reverse_frame_1 - 2.7e-18 66.3 2.2 2.9e-18 66.2 2.2 1.0 1 0 0 1 1 1 1 Phage integrase family DUF3763 PF12592.8 NODE_65883_length_243_cov_1.341346_g57942_i0reverse_frame_1 - 0.019 15.0 0.7 0.019 15.0 0.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3763) Cry1Ac_D5 PF17997.1 NODE_65868_length_243_cov_1.524038_g57927_i0forward_frame_1 - 0.7 9.7 3.5 1.3 8.9 3.5 1.5 1 1 0 1 1 1 0 Insecticidal delta-endotoxin CryIA(c) domain 5 VF530 PF09905.9 NODE_65863_length_243_cov_1.548077_g57922_i0reverse_frame_1 - 0.027 14.7 0.2 0.04 14.1 0.2 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 Opiods_neuropep PF01160.18 NODE_65862_length_243_cov_1.557692_g57921_i0forward_frame_1 - 0.028 14.5 0.5 0.057 13.5 0.5 1.5 1 0 0 1 1 1 0 Vertebrate endogenous opioids neuropeptide Fer2 PF00111.27 NODE_65862_length_243_cov_1.557692_g57921_i0forward_frame_1 - 0.031 14.2 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DNA_pol_B_3 PF08408.10 NODE_65861_length_243_cov_1.572115_g57920_i0forward_frame_1 - 0.03 14.5 2.2 0.04 14.1 2.2 1.2 1 0 0 1 1 1 0 DNA polymerase family B viral insert GF_recep_IV PF14843.6 NODE_65856_length_243_cov_1.644231_g57915_i0reverse_frame_1 - 0.0061 16.4 5.9 0.0074 16.1 5.9 1.0 1 0 0 1 1 1 1 Growth factor receptor domain IV HECT PF00632.25 NODE_65855_length_243_cov_1.653846_g57914_i0reverse_frame_1 - 0.1 12.1 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 HECT-domain (ubiquitin-transferase) RCC1_2 PF13540.6 NODE_65847_length_243_cov_1.745192_g57906_i0reverse_frame_1 - 7.8e-07 28.7 0.1 0.029 14.2 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF809 PF05663.11 NODE_65846_length_243_cov_1.754808_g57905_i0reverse_frame_1 - 0.13 12.4 4.8 0.14 12.3 4.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Fur_reg_FbpA PF13076.6 NODE_65846_length_243_cov_1.754808_g57905_i0forward_frame_1 - 0.02 14.6 0.0 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 Fur-regulated basic protein A Harakiri PF15196.6 NODE_65841_length_243_cov_1.802885_g57900_i0reverse_frame_1 - 0.063 13.7 5.7 0.11 13.0 5.7 1.5 1 1 0 1 1 1 0 Activator of apoptosis harakiri T6PP_N PF18572.1 NODE_65836_length_243_cov_1.841346_g57895_i0reverse_frame_1 - 0.036 13.9 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain Viral_P18 PF04521.13 NODE_65822_length_243_cov_2.014423_g57881_i0forward_frame_1 - 0.11 12.3 0.3 0.13 12.1 0.3 1.1 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein EF-hand_7 PF13499.6 NODE_65819_length_243_cov_2.024038_g57878_i0reverse_frame_1 - 0.061 13.8 0.0 0.078 13.4 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair Trans_reg_C PF00486.28 NODE_65811_length_243_cov_2.115385_g57870_i0reverse_frame_1 - 1.7e-10 40.8 0.5 2.1e-10 40.5 0.1 1.4 2 0 0 2 2 2 1 Transcriptional regulatory protein, C terminal MarR_2 PF12802.7 NODE_65811_length_243_cov_2.115385_g57870_i0reverse_frame_1 - 0.05 13.5 0.2 0.12 12.2 0.1 1.7 2 0 0 2 2 2 0 MarR family DUF725 PF05267.12 NODE_65806_length_243_cov_2.230769_g57865_i0forward_frame_1 - 0.089 12.8 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF725) polyprenyl_synt PF00348.17 NODE_65805_length_243_cov_2.254808_g57864_i0forward_frame_1 - 0.027 13.5 0.0 0.03 13.4 0.0 1.0 1 0 0 1 1 1 0 Polyprenyl synthetase 2-Hacid_dh PF00389.30 NODE_65805_length_243_cov_2.254808_g57864_i0forward_frame_1 - 0.048 13.3 0.0 0.049 13.3 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FlaF PF07309.11 NODE_65804_length_243_cov_2.274038_g57863_i0reverse_frame_1 - 0.082 12.9 0.2 0.13 12.2 0.2 1.3 1 0 0 1 1 1 0 Flagellar protein FlaF TGT PF01702.18 NODE_65803_length_243_cov_2.278846_g57862_i0reverse_frame_1 - 0.057 12.6 0.4 0.066 12.4 0.4 1.0 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase DUF3675 PF12428.8 NODE_65803_length_243_cov_2.278846_g57862_i0forward_frame_1 - 0.079 13.5 4.3 0.097 13.2 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) PDU_like PF15953.5 NODE_65800_length_243_cov_2.528846_g57859_i0forward_frame_1 - 0.13 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative propanediol utilisation PFK PF00365.20 NODE_65797_length_243_cov_2.870192_g57856_i0reverse_frame_1 - 0.00027 20.4 0.0 0.00028 20.3 0.0 1.0 1 0 0 1 1 1 1 Phosphofructokinase MinC_N PF05209.13 NODE_65796_length_243_cov_2.956731_g57855_i0forward_frame_1 - 4e-07 29.9 0.0 5.9e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 Septum formation inhibitor MinC, N-terminal domain Fib_alpha PF08702.10 NODE_65788_length_243_cov_4.048077_g57847_i0reverse_frame_1 - 0.91 9.7 4.3 0.27 11.4 1.9 1.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family L27_2 PF09045.10 NODE_65785_length_243_cov_5.024038_g57844_i0reverse_frame_1 - 0.58 10.2 3.5 1.3 9.0 2.9 2.0 2 1 0 2 2 2 0 L27_2 EAP30 PF04157.16 NODE_65784_length_243_cov_5.245192_g57843_i0reverse_frame_1 - 1.1e-08 34.6 0.0 1.2e-08 34.6 0.0 1.0 1 0 0 1 1 1 1 EAP30/Vps36 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks330.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks330.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks330.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks330.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DegT_DnrJ_EryC1 PF01041.17 NODE_65783_length_243_cov_5.663462_g57842_i0reverse_frame_1 - 0.016 14.5 0.1 0.018 14.3 0.1 1.1 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family DHFR_2 PF06442.11 NODE_65781_length_243_cov_10.187500_g57840_i0reverse_frame_1 - 0.033 14.0 0.0 0.034 14.0 0.0 1.2 1 0 0 1 1 1 0 R67 dihydrofolate reductase TMEM247 PF15444.6 NODE_65766_length_243_cov_43.475962_g57825_i0forward_frame_1 - 9.1 6.3 7.1 22 5.0 5.0 1.9 1 1 1 2 2 2 0 Transmembrane protein 247 Endothelin PF00322.17 NODE_65765_length_243_cov_43.956731_g57824_i0forward_frame_1 - 0.0056 16.3 0.2 0.0098 15.5 0.2 1.4 1 0 0 1 1 1 1 Endothelin family DUF3179 PF11376.8 NODE_65763_length_243_cov_46.865385_g57822_i0reverse_frame_1 - 0.032 13.6 0.1 0.033 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3179) V_ATPase_I PF01496.19 NODE_65761_length_243_cov_49.524038_g57820_i0forward_frame_1 - 0.0057 14.6 0.2 0.0067 14.4 0.2 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DRAT PF07357.11 NODE_65758_length_243_cov_50.524038_g57817_i0reverse_frame_1 - 0.071 12.3 0.0 0.071 12.3 0.0 1.1 1 0 0 1 1 1 0 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) Pantoate_ligase PF02569.15 NODE_65757_length_243_cov_51.346154_g57816_i0reverse_frame_1 - 0.22 10.7 0.0 0.22 10.7 0.0 1.0 1 0 0 1 1 1 0 Pantoate-beta-alanine ligase Mrr_cat PF04471.12 NODE_65755_length_243_cov_52.461538_g57814_i0reverse_frame_1 - 0.03 14.4 0.2 0.032 14.3 0.2 1.1 1 0 0 1 1 1 0 Restriction endonuclease Corona_NS3b PF03053.14 NODE_65755_length_243_cov_52.461538_g57814_i0forward_frame_1 - 0.18 11.5 2.1 0.19 11.5 2.1 1.1 1 0 0 1 1 1 0 ORF3b coronavirus protein Pkinase PF00069.25 NODE_65748_length_243_cov_58.937500_g57807_i0reverse_frame_1 - 6.7e-07 28.9 0.0 7.7e-07 28.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_65748_length_243_cov_58.937500_g57807_i0reverse_frame_1 - 0.0089 15.3 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Ank_2 PF12796.7 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 6.3e-06 26.7 0.0 8.2e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 1e-05 25.7 0.0 0.016 15.7 0.1 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 3.5e-05 24.3 0.0 5.9e-05 23.5 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 0.0013 19.1 0.0 0.15 12.7 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank_5 PF13857.6 NODE_65747_length_243_cov_58.980769_g57806_i0forward_frame_1 - 0.064 13.6 0.0 0.091 13.1 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Pro_isomerase PF00160.21 NODE_65743_length_243_cov_70.110577_g57802_i0reverse_frame_1 - 0.00018 21.8 0.0 0.00025 21.4 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PIRT PF15099.6 NODE_65742_length_243_cov_70.610577_g57801_i0forward_frame_1 - 0.0057 16.2 0.3 0.0066 16.0 0.3 1.2 1 0 0 1 1 1 1 Phosphoinositide-interacting protein family DUF676 PF05057.14 NODE_65734_length_243_cov_93.927885_g57793_i0forward_frame_1 - 0.069 12.6 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hit1_C PF18268.1 NODE_65733_length_243_cov_94.519231_g57792_i0reverse_frame_1 - 0.031 14.4 0.1 0.037 14.2 0.1 1.2 1 0 0 1 1 1 0 Hit1 C-terminal Tombus_P33 PF08500.10 NODE_65733_length_243_cov_94.519231_g57792_i0reverse_frame_1 - 0.14 12.2 1.1 0.25 11.3 0.2 1.8 1 1 1 2 2 2 0 Tombusvirus p33 Microvir_J PF04726.13 NODE_65730_length_243_cov_119.475962_g57789_i0reverse_frame_1 - 0.017 15.1 1.7 0.036 14.0 1.7 1.5 1 0 0 1 1 1 0 Microvirus J protein vMSA PF00695.19 NODE_65728_length_243_cov_126.423077_g57787_i0reverse_frame_1 - 3.8 6.5 6.7 4 6.4 6.7 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF452 PF04301.13 NODE_65726_length_243_cov_130.091346_g57785_i0reverse_frame_1 - 0.06 12.9 0.0 0.06 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF452) Cobl PF09469.10 NODE_65726_length_243_cov_130.091346_g57785_i0reverse_frame_1 - 0.14 12.5 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Cordon-bleu ubiquitin-like domain Coilin_N PF15862.5 NODE_65718_length_243_cov_191.562500_g57777_i0reverse_frame_1 - 9.1 6.1 11.5 11 5.8 11.5 1.1 1 0 0 1 1 1 0 Coilin N-terminus HydF_tetramer PF18133.1 NODE_65710_length_243_cov_421.788462_g57769_i0reverse_frame_1 - 0.17 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Hydrogen maturase F tetramerization domain zf-LITAF-like PF10601.9 NODE_65710_length_243_cov_421.788462_g57769_i0reverse_frame_1 - 0.25 11.6 9.2 9 6.6 0.0 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain DUF3482 PF11981.8 NODE_65706_length_243_cov_26859.432692_g57765_i0forward_frame_1 - 0.053 12.9 8.7 0.066 12.6 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) SgrR_N PF12793.7 NODE_65703_length_244_cov_0.837321_g57762_i0forward_frame_2 - 0.014 15.6 0.0 0.017 15.3 0.0 1.2 1 0 0 1 1 1 0 Sugar transport-related sRNA regulator N-term Gmx_para_CXXCG PF09535.10 NODE_65701_length_244_cov_0.875598_g57760_i0forward_frame_3 - 0.089 12.0 0.6 0.096 11.9 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) Ground-like PF04155.18 NODE_65700_length_244_cov_0.942584_g57759_i0forward_frame_2 - 0.021 15.4 0.3 0.021 15.4 0.3 1.5 2 0 0 2 2 2 0 Ground-like domain NPCC PF08058.11 NODE_65699_length_244_cov_0.956938_g57758_i0reverse_frame_2 - 0.028 14.5 0.3 0.043 13.9 0.3 1.3 1 0 0 1 1 1 0 Nuclear pore complex component DUF5310 PF17237.2 NODE_65699_length_244_cov_0.956938_g57758_i0forward_frame_3 - 2 8.3 8.2 0.86 9.5 2.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5310) Rad17 PF03215.15 NODE_65696_length_244_cov_1.076555_g57755_i0reverse_frame_2 - 0.00083 19.3 0.1 0.00096 19.1 0.1 1.0 1 0 0 1 1 1 1 Rad17 P-loop domain Fijivirus_P9-2 PF06837.11 NODE_65691_length_244_cov_1.143541_g57750_i0forward_frame_2 - 4.6 6.6 10.9 4.8 6.6 10.9 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein Ureidogly_lyase PF04115.12 NODE_65690_length_244_cov_1.143541_g57749_i0reverse_frame_3 - 0.065 13.0 1.4 0.073 12.8 1.4 1.0 1 0 0 1 1 1 0 Ureidoglycolate lyase Statherin PF03875.13 NODE_65685_length_244_cov_1.148325_g57744_i0forward_frame_3 - 0.034 14.2 1.1 0.051 13.7 1.1 1.2 1 0 0 1 1 1 0 Statherin Shisa PF13908.6 NODE_65682_length_244_cov_1.229665_g57741_i0forward_frame_3 - 0.0017 18.7 2.8 0.0019 18.5 2.8 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Orf78 PF06024.12 NODE_65682_length_244_cov_1.229665_g57741_i0forward_frame_3 - 0.037 14.3 1.5 0.04 14.2 1.5 1.2 1 0 0 1 1 1 0 Orf78 (ac78) PRIMA1 PF16101.5 NODE_65682_length_244_cov_1.229665_g57741_i0forward_frame_3 - 0.063 13.3 6.2 0.088 12.8 6.2 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 MRI PF15325.6 NODE_65682_length_244_cov_1.229665_g57741_i0forward_frame_2 - 2.2 9.4 5.2 2.7 9.1 5.2 1.1 1 0 0 1 1 1 0 Modulator of retrovirus infection Ephrin_rec_like PF07699.13 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 8.5e-09 35.0 27.9 3.1e-05 23.7 12.9 3.1 1 1 2 3 3 3 3 Putative ephrin-receptor like NCD3G PF07562.14 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 7.4e-05 22.6 12.8 0.0022 17.9 3.8 2.7 1 1 1 2 2 2 2 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 0.00075 19.8 14.0 0.16 12.4 0.1 3.5 1 1 2 3 3 3 3 TNFR/NGFR cysteine-rich region Opy2 PF09463.10 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 0.44 10.9 14.4 0.29 11.5 3.2 3.2 2 1 2 4 4 4 0 Opy2 protein Sp38 PF07354.12 NODE_65681_length_244_cov_1.258373_g57740_i0reverse_frame_2 - 8.8 5.7 13.7 9.9 5.6 7.9 2.0 1 1 1 2 2 2 0 Zona-pellucida-binding protein (Sp38) zf-primase PF09329.11 NODE_65681_length_244_cov_1.258373_g57740_i0forward_frame_3 - 3.6 7.5 12.1 0.88 9.4 2.1 2.3 1 1 1 2 2 2 0 Primase zinc finger RCDG1 PF15725.5 NODE_65680_length_244_cov_1.296651_g57739_i0reverse_frame_3 - 0.13 12.7 0.9 0.17 12.3 0.9 1.1 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein Ras PF00071.22 NODE_65676_length_244_cov_1.330144_g57735_i0forward_frame_3 - 1.5e-26 92.9 0.2 1.6e-26 92.8 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_65676_length_244_cov_1.330144_g57735_i0forward_frame_3 - 2.4e-20 72.9 0.2 2.6e-20 72.8 0.2 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_65676_length_244_cov_1.330144_g57735_i0forward_frame_3 - 5.8e-06 25.9 0.0 6.6e-06 25.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 NODE_65676_length_244_cov_1.330144_g57735_i0forward_frame_3 - 0.11 12.1 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain VESA1_N PF12785.7 NODE_65673_length_244_cov_1.368421_g57732_i0forward_frame_2 - 0.13 11.2 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 DUF1202 PF06717.11 NODE_65671_length_244_cov_1.411483_g57730_i0forward_frame_3 - 3.1e-45 154.9 6.3 3.3e-45 154.8 6.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1202) Creb_binding PF09030.10 NODE_65670_length_244_cov_1.416268_g57729_i0reverse_frame_2 - 0.17 12.6 0.0 0.23 12.1 0.0 1.2 1 0 0 1 1 1 0 Creb binding DHHC PF01529.20 NODE_65669_length_244_cov_1.421053_g57728_i0reverse_frame_3 - 1.4e-05 25.2 0.2 2.2e-05 24.6 0.2 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase Ribosomal_L23eN PF03939.13 NODE_65667_length_244_cov_1.444976_g57726_i0reverse_frame_3 - 0.16 12.2 0.1 0.24 11.6 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain DUF4916 PF16262.5 NODE_65666_length_244_cov_1.478469_g57725_i0reverse_frame_3 - 0.054 13.0 0.0 0.06 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) Macscav_rec PF03523.13 NODE_65665_length_244_cov_1.488038_g57724_i0reverse_frame_3 - 0.15 12.0 0.2 0.22 11.5 0.2 1.2 1 0 0 1 1 1 0 Macrophage scavenger receptor Cation_ATPase PF13246.6 NODE_65661_length_244_cov_1.521531_g57720_i0reverse_frame_3 - 2.4e-08 33.9 0.1 3.9e-08 33.3 0.1 1.3 1 0 0 1 1 1 1 Cation transport ATPase (P-type) DUF269 PF03270.13 NODE_65661_length_244_cov_1.521531_g57720_i0reverse_frame_3 - 0.034 14.2 0.1 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function, DUF269 Pox_ser-thr_kin PF05445.11 NODE_65660_length_244_cov_1.521531_g57719_i0reverse_frame_2 - 0.0083 15.1 1.3 0.0098 14.9 1.3 1.0 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase DUF3262 PF11660.8 NODE_65660_length_244_cov_1.521531_g57719_i0forward_frame_3 - 0.015 15.7 0.2 0.019 15.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3262) WBS28 PF15164.6 NODE_65660_length_244_cov_1.521531_g57719_i0forward_frame_3 - 0.038 13.3 0.5 0.04 13.2 0.5 1.1 1 0 0 1 1 1 0 Williams-Beuren syndrome chromosomal region 28 protein homologue Transpos_assoc PF13963.6 NODE_65657_length_244_cov_1.535885_g57716_i0reverse_frame_2 - 0.055 13.8 0.5 0.094 13.0 0.6 1.7 1 1 0 1 1 1 0 Transposase-associated domain Phage_ABA_S PF18066.1 NODE_65657_length_244_cov_1.535885_g57716_i0reverse_frame_2 - 0.085 13.6 0.0 0.095 13.4 0.0 1.2 1 0 0 1 1 1 0 Phage ABA sandwich domain DUF2071 PF09844.9 NODE_65655_length_244_cov_1.545455_g57714_i0reverse_frame_3 - 0.033 13.8 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (COG2071) PSI PF01437.25 NODE_65655_length_244_cov_1.545455_g57714_i0forward_frame_2 - 0.17 12.5 8.1 0.28 11.7 8.1 1.5 1 1 0 1 1 1 0 Plexin repeat Bacillus_PapR PF05968.11 NODE_65653_length_244_cov_1.569378_g57712_i0reverse_frame_3 - 0.063 13.2 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 Bacillus PapR protein SSI PF00720.17 NODE_65653_length_244_cov_1.569378_g57712_i0reverse_frame_2 - 0.14 12.1 1.9 0.38 10.7 1.1 1.8 1 1 1 2 2 2 0 Subtilisin inhibitor-like MARVEL PF01284.23 NODE_65652_length_244_cov_1.583732_g57711_i0forward_frame_2 - 0.026 14.5 5.2 0.033 14.2 5.2 1.2 1 0 0 1 1 1 0 Membrane-associating domain DUF3810 PF12725.7 NODE_65652_length_244_cov_1.583732_g57711_i0forward_frame_2 - 0.34 10.2 5.5 0.38 10.1 5.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF2039 PF10217.9 NODE_65651_length_244_cov_1.607656_g57710_i0reverse_frame_2 - 0.0087 16.4 7.3 0.0096 16.2 7.3 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2039) zf-C4 PF00105.18 NODE_65651_length_244_cov_1.607656_g57710_i0reverse_frame_2 - 0.039 14.4 2.5 0.051 14.0 2.5 1.1 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) DHHC PF01529.20 NODE_65651_length_244_cov_1.607656_g57710_i0reverse_frame_2 - 0.063 13.4 1.1 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 DHHC palmitoyltransferase zf-C2HCIx2C PF10782.9 NODE_65651_length_244_cov_1.607656_g57710_i0reverse_frame_2 - 0.43 10.5 6.5 0.6 10.1 0.7 2.2 1 1 1 2 2 2 0 Zinc-finger DnaB_2 PF07261.11 NODE_65650_length_244_cov_1.612440_g57709_i0reverse_frame_3 - 0.052 13.3 0.4 0.13 12.1 0.1 1.6 1 1 1 2 2 2 0 Replication initiation and membrane attachment CHASE9 PF17153.4 NODE_65644_length_244_cov_1.698565_g57703_i0reverse_frame_3 - 1e-37 128.8 0.9 1.1e-37 128.7 0.9 1.0 1 0 0 1 1 1 1 Periplasmic sensor domain, extracellular STAS PF01740.21 NODE_65644_length_244_cov_1.698565_g57703_i0reverse_frame_3 - 0.027 14.1 0.0 0.037 13.7 0.0 1.1 1 0 0 1 1 1 0 STAS domain dCache_1 PF02743.18 NODE_65644_length_244_cov_1.698565_g57703_i0reverse_frame_3 - 0.071 12.9 0.1 0.089 12.6 0.1 1.0 1 0 0 1 1 1 0 Cache domain Pes-10 PF07149.11 NODE_65641_length_244_cov_1.722488_g57700_i0reverse_frame_3 - 0.083 11.9 0.1 0.097 11.7 0.1 1.1 1 0 0 1 1 1 0 Pes-10 Spt4 PF06093.13 NODE_65641_length_244_cov_1.722488_g57700_i0reverse_frame_3 - 0.095 12.8 0.5 0.13 12.4 0.5 1.2 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger DUF2627 PF11118.8 NODE_65640_length_244_cov_1.722488_g57699_i0forward_frame_3 - 0.15 12.7 0.5 0.21 12.2 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) Cation_ATPase_C PF00689.21 NODE_65639_length_244_cov_1.722488_g57698_i0reverse_frame_3 - 0.011 15.4 0.0 0.012 15.3 0.0 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF809 PF05663.11 NODE_65639_length_244_cov_1.722488_g57698_i0forward_frame_2 - 0.058 13.5 0.8 0.064 13.4 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF809) TILa PF12714.7 NODE_65638_length_244_cov_1.736842_g57697_i0forward_frame_2 - 0.43 10.6 6.8 0.22 11.5 4.4 1.7 1 1 0 1 1 1 0 TILa domain 3Beta_HSD PF01073.19 NODE_65636_length_244_cov_1.760766_g57695_i0forward_frame_3 - 0.047 12.7 0.0 0.055 12.5 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family PsbN PF02468.15 NODE_65636_length_244_cov_1.760766_g57695_i0forward_frame_2 - 0.089 12.7 3.0 2.4 8.1 0.1 2.2 1 1 1 2 2 2 0 Photosystem II reaction centre N protein (psbN) GPHH PF16905.5 NODE_65629_length_244_cov_1.846890_g57688_i0reverse_frame_3 - 1.5e-06 27.8 0.1 2.3e-06 27.3 0.1 1.2 1 0 0 1 1 1 1 Voltage-dependent L-type calcium channel, IQ-associated Glyco_hydro_67C PF07477.12 NODE_65628_length_244_cov_1.851675_g57687_i0forward_frame_3 - 0.033 13.7 0.0 0.034 13.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 C-terminus DUF1614 PF07758.11 NODE_65628_length_244_cov_1.851675_g57687_i0forward_frame_2 - 0.076 13.0 0.1 0.087 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1614) MatP_C PF17414.2 NODE_65627_length_244_cov_1.904306_g57686_i0forward_frame_3 - 0.034 14.3 0.0 0.056 13.7 0.0 1.3 1 0 0 1 1 1 0 MatP C-terminal ribbon-helix-helix domain Ferric_reduct PF01794.19 NODE_65627_length_244_cov_1.904306_g57686_i0forward_frame_2 - 0.08 13.1 3.4 0.11 12.6 2.6 1.6 1 1 1 2 2 2 0 Ferric reductase like transmembrane component zinc_ribbon_2 PF13240.6 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 5.4e-06 25.9 1.9 1e-05 25.1 1.9 1.5 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 9.9e-05 21.6 1.8 0.00019 20.7 1.8 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.0011 19.0 5.8 0.0017 18.4 5.8 1.4 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.0069 17.1 4.0 0.0087 16.8 4.0 1.2 1 0 0 1 1 1 1 zinc-ribbon family Nudix_N_2 PF14803.6 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.039 13.9 2.1 5.2 7.1 0.1 2.5 2 0 0 2 2 2 0 Nudix N-terminal Vps36-NZF-N PF16988.5 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.093 12.1 3.6 6.8 6.2 3.6 2.2 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Fer4_2 PF12797.7 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.28 11.4 0.2 0.28 11.4 0.2 2.9 2 1 1 3 3 3 0 4Fe-4S binding domain NOB1_Zn_bind PF08772.11 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 0.52 10.5 3.7 1.7 8.8 0.2 2.2 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Ribosomal_L32p PF01783.23 NODE_65626_length_244_cov_1.923445_g57685_i0reverse_frame_2 - 1.4 9.2 4.6 1.3 9.3 2.5 1.9 1 1 1 2 2 2 0 Ribosomal L32p protein family SabA_adhesion PF18304.1 NODE_65626_length_244_cov_1.923445_g57685_i0forward_frame_2 - 0.15 11.2 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 SabA N-terminal extracellular adhesion domain Nop10p PF04135.12 NODE_65624_length_244_cov_2.023923_g57683_i0forward_frame_3 - 0.14 12.3 0.0 0.27 11.3 0.0 1.5 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family HPIH PF13323.6 NODE_65623_length_244_cov_2.028708_g57682_i0reverse_frame_2 - 0.081 12.8 0.0 0.089 12.6 0.0 1.1 1 0 0 1 1 1 0 N-terminal domain with HPIH motif DUF3007 PF11460.8 NODE_65621_length_244_cov_2.028708_g57680_i0forward_frame_2 - 0.15 12.3 0.3 0.17 12.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) Cytomega_UL84 PF06284.11 NODE_65615_length_244_cov_2.095694_g57674_i0forward_frame_2 - 0.03 12.8 0.4 0.034 12.6 0.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Tubulin PF00091.25 NODE_65615_length_244_cov_2.095694_g57674_i0forward_frame_2 - 0.13 12.4 0.0 0.16 12.2 0.0 1.0 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain CENP-B_dimeris PF09026.10 NODE_65613_length_244_cov_2.105263_g57672_i0forward_frame_3 - 0.16 12.4 4.8 0.18 12.2 4.8 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain Gp-FAR-1 PF05823.12 NODE_65610_length_244_cov_2.148325_g57669_i0reverse_frame_2 - 0.056 13.8 0.2 0.057 13.8 0.2 1.2 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) zf-HYPF PF07503.12 NODE_65607_length_244_cov_2.172249_g57666_i0forward_frame_2 - 0.051 13.3 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 HypF finger DEC1 PF15859.5 NODE_65603_length_244_cov_2.205742_g57662_i0reverse_frame_3 - 0.031 14.3 0.0 0.041 13.9 0.0 1.2 1 0 0 1 1 1 0 Deleted in esophageal cancer 1 family Dak1_2 PF13684.6 NODE_65598_length_244_cov_2.267943_g57657_i0reverse_frame_2 - 0.2 10.7 0.2 0.23 10.5 0.2 1.0 1 0 0 1 1 1 0 Dihydroxyacetone kinase family zf-ANAPC11 PF12861.7 NODE_65597_length_244_cov_2.311005_g57656_i0forward_frame_2 - 0.93 9.6 7.3 1.3 9.1 7.3 1.4 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Autoind_bind PF03472.15 NODE_65594_length_244_cov_2.339713_g57653_i0reverse_frame_2 - 0.088 12.3 0.7 0.1 12.1 0.7 1.2 1 0 0 1 1 1 0 Autoinducer binding domain TrbM PF07424.11 NODE_65591_length_244_cov_2.363636_g57650_i0forward_frame_2 - 0.05 13.6 0.1 0.056 13.4 0.1 1.1 1 0 0 1 1 1 0 TrbM Cys_rich_FGFR PF00839.17 NODE_65589_length_244_cov_2.425837_g57648_i0reverse_frame_3 - 0.0089 16.2 1.0 0.013 15.7 1.0 1.3 1 0 0 1 1 1 1 Cysteine rich repeat GGA_N-GAT PF18308.1 NODE_65589_length_244_cov_2.425837_g57648_i0forward_frame_3 - 0.22 11.2 0.1 0.3 10.7 0.1 1.2 1 0 0 1 1 1 0 GGA N-GAT domain DUF3791 PF12668.7 NODE_65586_length_244_cov_2.454545_g57645_i0reverse_frame_2 - 8.5 6.5 11.2 0.56 10.3 2.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3791) Glyco_hydro_20 PF00728.22 NODE_65585_length_244_cov_2.488038_g57644_i0reverse_frame_2 - 4.9e-12 45.9 0.0 5.6e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain Ribosomal_L34e PF01199.18 NODE_65585_length_244_cov_2.488038_g57644_i0forward_frame_3 - 0.23 11.8 5.9 0.25 11.7 5.9 1.1 1 0 0 1 1 1 0 Ribosomal protein L34e ANTH PF07651.16 NODE_65582_length_244_cov_2.540670_g57641_i0forward_frame_2 - 0.07 12.1 0.0 0.07 12.1 0.0 1.2 1 0 0 1 1 1 0 ANTH domain PTR PF12789.7 NODE_65581_length_244_cov_2.545455_g57640_i0forward_frame_2 - 0.056 13.5 3.3 0.089 12.9 2.3 1.8 1 1 1 2 2 2 0 Phage tail repeat like Lung_7-TM_R PF06814.13 NODE_65580_length_244_cov_2.559809_g57639_i0forward_frame_3 - 0.055 12.7 0.1 0.067 12.4 0.1 1.0 1 0 0 1 1 1 0 Lung seven transmembrane receptor CobU PF02283.16 NODE_65580_length_244_cov_2.559809_g57639_i0forward_frame_3 - 0.067 12.8 0.0 0.069 12.7 0.0 1.1 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase Mucin PF01456.17 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 0.29 11.1 46.6 0.38 10.7 46.6 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein NPR3 PF03666.13 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 0.3 9.8 11.9 0.32 9.7 11.9 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 MGC-24 PF05283.11 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 3.1 8.3 28.0 4.1 7.9 28.0 1.2 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin RIFIN PF02009.16 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 6.2 6.6 10.4 6.5 6.6 10.4 1.0 1 0 0 1 1 1 0 Rifin MPM1 PF17234.2 NODE_65579_length_244_cov_2.598086_g57638_i0reverse_frame_3 - 8.9 6.5 14.1 11 6.3 14.1 1.1 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 BRI3BP PF14965.6 NODE_65578_length_244_cov_2.598086_g57637_i0reverse_frame_3 - 0.01 15.4 2.7 0.013 15.0 2.7 1.2 1 0 0 1 1 1 1 Negative regulator of p53/TP53 Autoind_bind PF03472.15 NODE_65578_length_244_cov_2.598086_g57637_i0reverse_frame_2 - 0.12 11.8 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Autoinducer binding domain RINGv PF12906.7 NODE_65574_length_244_cov_2.636364_g57633_i0reverse_frame_2 - 0.84 9.8 5.7 0.24 11.5 1.0 2.2 2 1 0 2 2 2 0 RING-variant domain Spaetzle PF16077.5 NODE_65573_length_244_cov_2.650718_g57632_i0reverse_frame_3 - 0.016 15.7 1.4 0.016 15.7 1.4 1.3 2 0 0 2 2 2 0 Spaetzle MlrC_C PF07171.12 NODE_65569_length_244_cov_2.889952_g57628_i0forward_frame_2 - 0.18 12.0 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 MlrC C-terminus DUF3460 PF11943.8 NODE_65566_length_244_cov_2.899522_g57625_i0reverse_frame_2 - 0.093 13.0 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3460) zf-HIT PF04438.16 NODE_65566_length_244_cov_2.899522_g57625_i0reverse_frame_2 - 6.5 6.7 8.7 1.8 8.5 2.6 2.3 1 1 1 2 2 2 0 HIT zinc finger FAM184 PF15665.5 NODE_65565_length_244_cov_2.942584_g57624_i0forward_frame_3 - 0.098 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B DUF4803 PF16061.5 NODE_65562_length_244_cov_3.325359_g57621_i0forward_frame_3 - 7.1 6.0 12.0 14 5.1 12.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4803) MCM_N PF14551.6 NODE_65561_length_244_cov_3.354067_g57620_i0reverse_frame_3 - 0.0044 17.6 0.4 0.0054 17.3 0.4 1.2 1 0 0 1 1 1 1 MCM N-terminal domain PikAIV_N PF18605.1 NODE_65561_length_244_cov_3.354067_g57620_i0reverse_frame_3 - 0.01 15.4 0.0 0.019 14.6 0.0 1.5 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain DivIC PF04977.15 NODE_65561_length_244_cov_3.354067_g57620_i0reverse_frame_3 - 0.026 14.3 2.2 0.037 13.8 1.9 1.5 1 1 0 1 1 1 0 Septum formation initiator YlqD PF11068.8 NODE_65561_length_244_cov_3.354067_g57620_i0reverse_frame_3 - 0.15 12.4 6.0 0.21 11.9 6.0 1.3 1 1 0 1 1 1 0 YlqD protein Peripla_BP_3 PF13377.6 NODE_65558_length_244_cov_4.454545_g57617_i0forward_frame_2 - 4.8e-14 53.0 0.0 5e-14 53.0 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 NODE_65558_length_244_cov_4.454545_g57617_i0forward_frame_2 - 0.00016 21.2 0.0 0.00019 21.0 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family FR47 PF08445.10 NODE_65558_length_244_cov_4.454545_g57617_i0forward_frame_2 - 0.031 14.2 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 FR47-like protein Mon2_C PF16206.5 NODE_65555_length_244_cov_5.138756_g57614_i0forward_frame_3 - 0.02 13.1 0.9 0.022 12.9 0.9 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein P53_tetramer PF07710.11 NODE_65555_length_244_cov_5.138756_g57614_i0forward_frame_3 - 0.16 11.4 0.0 0.32 10.3 0.0 1.5 1 0 0 1 1 1 0 P53 tetramerisation motif PhoR PF11808.8 NODE_65554_length_244_cov_6.473684_g57613_i0forward_frame_3 - 0.0029 18.0 0.2 0.0035 17.7 0.2 1.2 1 0 0 1 1 1 1 Phosphate regulon sensor protein PhoR Wap1 PF16997.5 NODE_65551_length_244_cov_20.234450_g57610_i0reverse_frame_3 - 0.00024 20.4 2.3 0.00026 20.3 2.3 1.0 1 0 0 1 1 1 1 Wap1 domain Trm112p PF03966.16 NODE_65550_length_244_cov_28.674641_g57609_i0forward_frame_3 - 3.5e-05 24.3 0.2 5.1e-05 23.8 0.2 1.4 1 0 0 1 1 1 1 Trm112p-like protein ADK_lid PF05191.14 NODE_65550_length_244_cov_28.674641_g57609_i0forward_frame_3 - 0.0096 15.9 0.0 0.018 15.0 0.0 1.5 1 0 0 1 1 1 1 Adenylate kinase, active site lid Osmo_MPGsynth PF09488.10 NODE_65550_length_244_cov_28.674641_g57609_i0forward_frame_3 - 0.046 12.4 0.0 0.046 12.4 0.0 1.0 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) HSP90 PF00183.18 NODE_65542_length_244_cov_37.784689_g57601_i0reverse_frame_3 - 0.49 9.2 9.7 0.57 9.0 9.7 1.0 1 0 0 1 1 1 0 Hsp90 protein Fucose_iso_N2 PF07882.12 NODE_65542_length_244_cov_37.784689_g57601_i0reverse_frame_3 - 5.7 6.5 6.7 21 4.6 6.7 1.8 1 1 0 1 1 1 0 L-fucose isomerase, second N-terminal domain YlaC PF10777.9 NODE_65542_length_244_cov_37.784689_g57601_i0forward_frame_3 - 1.2 9.0 7.6 1.4 8.8 7.6 1.0 1 0 0 1 1 1 0 Inner membrane protein YlaC Spore_GerQ PF09671.10 NODE_65539_length_244_cov_40.076555_g57598_i0forward_frame_3 - 0.0063 16.5 0.0 0.01 15.8 0.0 1.4 1 0 0 1 1 1 1 Spore coat protein (Spore_GerQ) KN_motif PF12075.8 NODE_65539_length_244_cov_40.076555_g57598_i0forward_frame_3 - 0.092 12.6 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 KN motif AP3D1 PF06375.11 NODE_65538_length_244_cov_40.875598_g57597_i0reverse_frame_3 - 2.7 8.2 12.0 3.3 7.9 12.0 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Sarcoglycan_1 PF04790.13 NODE_65538_length_244_cov_40.875598_g57597_i0forward_frame_2 - 1.8 7.9 4.0 2.1 7.6 4.0 1.0 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein CBM_19 PF03427.13 NODE_65536_length_244_cov_44.033493_g57595_i0forward_frame_3 - 0.053 13.5 0.1 0.083 12.9 0.1 1.4 1 1 0 1 1 1 0 Carbohydrate binding domain (family 19) DUF1719 PF08224.11 NODE_65536_length_244_cov_44.033493_g57595_i0forward_frame_3 - 0.11 11.6 0.7 0.12 11.5 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) stn_TNFRSF12A PF12191.8 NODE_65534_length_244_cov_48.703349_g57593_i0reverse_frame_3 - 0.085 13.1 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain Nairovirus_M PF07948.11 NODE_65531_length_244_cov_50.641148_g57590_i0forward_frame_2 - 0.05 11.8 0.0 0.054 11.7 0.0 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like PUF PF00806.19 NODE_65527_length_244_cov_54.014354_g57586_i0reverse_frame_3 - 3.5e-05 23.2 0.0 7.6e-05 22.2 0.0 1.6 1 0 0 1 1 1 1 Pumilio-family RNA binding repeat DUF1910 PF08928.10 NODE_65527_length_244_cov_54.014354_g57586_i0reverse_frame_3 - 0.098 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1910) Peptidase_M91 PF14891.6 NODE_65527_length_244_cov_54.014354_g57586_i0reverse_frame_3 - 0.19 12.0 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 Effector protein zf-RING_11 PF17123.5 NODE_65523_length_244_cov_62.909091_g57582_i0reverse_frame_3 - 0.34 10.7 2.8 0.62 9.9 0.1 2.7 3 1 0 3 3 3 0 RING-like zinc finger DUF3219 PF11514.8 NODE_65522_length_244_cov_66.306220_g57581_i0reverse_frame_3 - 0.011 15.7 0.1 0.013 15.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3219) EGF_3 PF12947.7 NODE_65522_length_244_cov_66.306220_g57581_i0forward_frame_3 - 0.045 14.0 3.2 0.078 13.2 3.2 1.4 1 0 0 1 1 1 0 EGF domain PolyA_pol_RNAbd PF12627.7 NODE_65521_length_244_cov_66.866029_g57580_i0reverse_frame_3 - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Probable RNA and SrmB- binding site of polymerase A UT PF03253.14 NODE_65518_length_244_cov_69.315789_g57577_i0forward_frame_3 - 0.046 12.9 4.6 0.051 12.7 4.6 1.0 1 0 0 1 1 1 0 Urea transporter zf-C3Hc3H PF13891.6 NODE_65516_length_244_cov_71.502392_g57575_i0forward_frame_2 - 0.0069 16.7 0.5 0.011 16.1 0.5 1.4 1 1 0 1 1 1 1 Potential DNA-binding domain NOD2_WH PF17779.1 NODE_65514_length_244_cov_75.339713_g57573_i0reverse_frame_3 - 0.11 12.8 1.5 0.16 12.3 1.5 1.2 1 0 0 1 1 1 0 NOD2 winged helix domain Ion_trans PF00520.31 NODE_65509_length_244_cov_89.913876_g57568_i0reverse_frame_2 - 0.0035 16.6 0.8 0.004 16.4 0.8 1.0 1 0 0 1 1 1 1 Ion transport protein AOX PF01786.17 NODE_65508_length_244_cov_105.511962_g57567_i0forward_frame_3 - 0.61 9.6 3.9 0.65 9.5 3.9 1.3 1 1 0 1 1 1 0 Alternative oxidase Fijivirus_P9-2 PF06837.11 NODE_65508_length_244_cov_105.511962_g57567_i0forward_frame_3 - 6.2 6.2 13.6 7.3 6.0 13.6 1.2 1 0 0 1 1 1 0 Fijivirus P9-2 protein FlxA PF14282.6 NODE_65506_length_244_cov_109.598086_g57565_i0forward_frame_2 - 0.0021 18.0 0.9 0.0028 17.6 0.9 1.1 1 0 0 1 1 1 1 FlxA-like protein DUF3381 PF11861.8 NODE_65506_length_244_cov_109.598086_g57565_i0forward_frame_2 - 0.0023 17.8 0.1 0.0023 17.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3381) HTH_Tnp_Tc3_1 PF11427.8 NODE_65506_length_244_cov_109.598086_g57565_i0forward_frame_2 - 0.12 12.3 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 Tc3 transposase UPF0239 PF06783.11 NODE_65506_length_244_cov_109.598086_g57565_i0forward_frame_2 - 0.46 10.7 4.6 0.57 10.4 4.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) DUF5558 PF17713.1 NODE_65500_length_244_cov_195.392344_g57559_i0forward_frame_2 - 0.1 13.0 0.2 0.1 13.0 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5558) CorA PF01544.18 NODE_65493_length_244_cov_904.779904_g57552_i0forward_frame_3 - 0.048 13.0 0.1 0.052 12.9 0.1 1.0 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF5082 PF16888.5 NODE_65493_length_244_cov_904.779904_g57552_i0forward_frame_3 - 0.081 13.2 1.0 5.2 7.4 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) GGA_N-GAT PF18308.1 NODE_65493_length_244_cov_904.779904_g57552_i0forward_frame_2 - 0.12 12.1 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 GGA N-GAT domain HTH_39 PF14090.6 NODE_65487_length_245_cov_0.890476_g57546_i0reverse_frame_2 - 0.017 14.9 0.0 0.028 14.2 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain TetM_leader PF08076.11 NODE_65484_length_245_cov_0.957143_g57543_i0reverse_frame_3 - 4.6 7.1 5.9 4.2 7.2 0.1 2.9 3 0 0 3 3 3 0 Tetracycline resistance determinant leader peptide gag_pre-integrs PF13976.6 NODE_65484_length_245_cov_0.957143_g57543_i0forward_frame_3 - 0.022 14.6 0.2 0.034 14.0 0.1 1.4 1 1 0 1 1 1 0 GAG-pre-integrase domain zf-C3HC4_5 PF17121.5 NODE_65484_length_245_cov_0.957143_g57543_i0forward_frame_2 - 0.031 14.2 3.1 0.06 13.2 0.6 2.2 1 1 2 3 3 3 0 Zinc finger, C3HC4 type (RING finger) SAM_PNT PF02198.16 NODE_65483_length_245_cov_0.990476_g57542_i0forward_frame_3 - 0.012 15.6 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 Sterile alpha motif (SAM)/Pointed domain Clp1 PF06807.14 NODE_65482_length_245_cov_1.085714_g57541_i0forward_frame_3 - 0.1 13.0 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Pre-mRNA cleavage complex II protein Clp1 Phg_2220_C PF09524.10 NODE_65480_length_245_cov_1.138095_g57539_i0forward_frame_3 - 0.11 12.6 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) DUF4570 PF15134.6 NODE_65476_length_245_cov_1.142857_g57535_i0reverse_frame_3 - 0.12 12.4 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4570) GIT1_C PF12205.8 NODE_65475_length_245_cov_1.161905_g57534_i0reverse_frame_3 - 0.12 12.5 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term Pro-MCH PF05824.12 NODE_65474_length_245_cov_1.171429_g57533_i0reverse_frame_3 - 0.17 11.8 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 Pro-melanin-concentrating hormone (Pro-MCH) ATP-synt_C PF00137.21 NODE_65472_length_245_cov_1.219048_g57531_i0reverse_frame_2 - 0.057 13.8 3.7 0.08 13.3 3.7 1.2 1 0 0 1 1 1 0 ATP synthase subunit C PET122 PF05476.11 NODE_65471_length_245_cov_1.228571_g57530_i0reverse_frame_3 - 0.056 12.7 0.3 0.064 12.5 0.3 1.1 1 0 0 1 1 1 0 PET122 CBF PF03914.17 NODE_65471_length_245_cov_1.228571_g57530_i0reverse_frame_2 - 1.1e-12 48.3 0.0 1.4e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 CBF/Mak21 family Hap4_Hap_bind PF10297.9 NODE_65468_length_245_cov_1.247619_g57527_i0reverse_frame_3 - 0.66 10.2 7.0 0.5 10.6 1.4 2.7 2 0 0 2 2 2 0 Minimal binding motif of Hap4 for binding to Hap2/3/5 Importin_rep_3 PF18806.1 NODE_65465_length_245_cov_1.266667_g57524_i0forward_frame_3 - 0.00036 20.5 0.4 0.00046 20.2 0.4 1.2 1 0 0 1 1 1 1 Importin 13 repeat DUF762 PF05555.11 NODE_65464_length_245_cov_1.271429_g57523_i0reverse_frame_2 - 0.16 11.5 0.0 0.18 11.3 0.0 1.0 1 0 0 1 1 1 0 Coxiella burnetii protein of unknown function (DUF762) fn2 PF00040.19 NODE_65462_length_245_cov_1.295238_g57521_i0forward_frame_2 - 0.088 13.1 1.3 6.9 7.0 0.3 2.3 1 1 1 2 2 2 0 Fibronectin type II domain CH PF00307.31 NODE_65456_length_245_cov_1.333333_g57515_i0reverse_frame_3 - 0.049 13.8 0.0 0.049 13.8 0.0 1.2 1 0 0 1 1 1 0 Calponin homology (CH) domain DUF4407 PF14362.6 NODE_65454_length_245_cov_1.342857_g57513_i0reverse_frame_3 - 0.089 12.1 3.8 0.083 12.2 3.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3602 PF12223.8 NODE_65454_length_245_cov_1.342857_g57513_i0reverse_frame_3 - 0.36 11.5 5.5 0.17 12.5 3.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3602) Arm-DNA-bind_5 PF17293.2 NODE_65454_length_245_cov_1.342857_g57513_i0reverse_frame_3 - 0.86 10.1 5.4 1.1 9.8 5.4 1.1 1 0 0 1 1 1 0 Arm DNA-binding domain DPM3 PF08285.11 NODE_65453_length_245_cov_1.357143_g57512_i0reverse_frame_3 - 0.042 14.0 0.6 0.05 13.8 0.6 1.1 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Beta-Casp PF10996.8 NODE_65453_length_245_cov_1.357143_g57512_i0reverse_frame_3 - 0.15 12.4 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 Beta-Casp domain Pox_P4A PF03395.14 NODE_65453_length_245_cov_1.357143_g57512_i0reverse_frame_2 - 3.9 4.9 6.5 4.6 4.7 6.5 1.0 1 0 0 1 1 1 0 Poxvirus P4A protein Ion_trans PF00520.31 NODE_65453_length_245_cov_1.357143_g57512_i0forward_frame_2 - 0.054 12.7 0.0 0.057 12.6 0.0 1.0 1 0 0 1 1 1 0 Ion transport protein NUC130_3NT PF08158.12 NODE_65448_length_245_cov_1.423810_g57507_i0reverse_frame_2 - 0.024 15.0 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 NUC130/3NT domain DAD PF02109.16 NODE_65447_length_245_cov_1.447619_g57506_i0reverse_frame_3 - 0.013 15.8 1.1 0.015 15.6 1.1 1.0 1 0 0 1 1 1 0 DAD family Sipho_tail PF05709.11 NODE_65446_length_245_cov_1.495238_g57505_i0forward_frame_3 - 0.1 12.0 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Phage tail protein FAT PF02259.23 NODE_65445_length_245_cov_1.500000_g57504_i0forward_frame_2 - 9.1e-16 58.0 0.0 9.7e-16 57.9 0.0 1.0 1 0 0 1 1 1 1 FAT domain MuF_C PF18819.1 NODE_65445_length_245_cov_1.500000_g57504_i0forward_frame_2 - 0.0085 16.1 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 Phage MuF-C-terminal domain DUF5329 PF17263.2 NODE_65442_length_245_cov_1.519048_g57501_i0forward_frame_3 - 0.055 13.7 0.1 0.07 13.3 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5329) Colipase PF01114.18 NODE_65441_length_245_cov_1.519048_g57500_i0reverse_frame_2 - 0.024 14.3 1.2 0.024 14.3 1.2 2.2 1 1 1 2 2 2 0 Colipase, N-terminal domain SF3A3 PF16837.5 NODE_65441_length_245_cov_1.519048_g57500_i0forward_frame_2 - 0.1 13.1 1.9 0.15 12.6 1.9 1.4 1 1 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 NA37 PF04245.13 NODE_65433_length_245_cov_1.614286_g57492_i0forward_frame_2 - 0.04 13.4 0.1 0.049 13.1 0.1 1.3 1 1 0 1 1 1 0 37-kD nucleoid-associated bacterial protein DUF5339 PF17274.2 NODE_65431_length_245_cov_1.700000_g57490_i0reverse_frame_2 - 0.051 14.4 0.2 0.11 13.4 0.1 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5339) DUF3128 PF11326.8 NODE_65430_length_245_cov_1.709524_g57489_i0forward_frame_3 - 0.015 15.7 2.3 0.021 15.2 2.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3128) DUF2924 PF11149.8 NODE_65429_length_245_cov_1.709524_g57488_i0forward_frame_3 - 0.11 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2924) EF-hand_6 PF13405.6 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 3.3e-06 26.6 0.1 7e-06 25.6 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 4.7e-06 25.8 0.1 7.6e-06 25.1 0.1 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 7.3e-06 26.3 0.0 8.7e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 4.1e-05 23.4 0.3 6.3e-05 22.7 0.1 1.5 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_65425_length_245_cov_1.747619_g57484_i0reverse_frame_2 - 4.1e-05 22.9 0.1 7.8e-05 22.0 0.1 1.5 1 0 0 1 1 1 1 EF hand RRM_1 PF00076.22 NODE_65424_length_245_cov_1.771429_g57483_i0reverse_frame_3 - 5.1e-16 58.3 0.1 5.8e-16 58.1 0.1 1.0 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF3481 PF11980.8 NODE_65422_length_245_cov_1.804762_g57481_i0forward_frame_2 - 0.11 12.2 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein Mgr1 PF08602.10 NODE_65421_length_245_cov_1.809524_g57480_i0forward_frame_2 - 0.14 10.9 0.2 0.16 10.7 0.2 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit RSV_NS2 PF03113.14 NODE_65418_length_245_cov_1.833333_g57477_i0forward_frame_3 - 0.11 12.5 0.6 0.14 12.2 0.6 1.1 1 0 0 1 1 1 0 Respiratory synctial virus non-structural protein NS2 DUF2733 PF10813.8 NODE_65417_length_245_cov_1.847619_g57476_i0reverse_frame_2 - 0.014 15.2 0.3 0.031 14.1 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) UCH PF00443.29 NODE_65415_length_245_cov_1.876190_g57474_i0reverse_frame_2 - 1.6e-07 31.1 0.3 1.8e-07 30.9 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks331.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks331.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks331.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks331.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Uso1_p115_head PF04869.14 NODE_65415_length_245_cov_1.876190_g57474_i0forward_frame_2 - 0.1 11.7 0.1 0.12 11.5 0.1 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, head region GUB_WAK_bind PF13947.6 NODE_65413_length_245_cov_1.895238_g57472_i0forward_frame_3 - 0.03 15.1 0.8 0.071 13.9 0.3 1.8 1 1 0 2 2 2 0 Wall-associated receptor kinase galacturonan-binding Fels1 PF05666.11 NODE_65411_length_245_cov_1.928571_g57470_i0reverse_frame_3 - 0.061 13.0 0.2 0.097 12.3 0.2 1.2 1 0 0 1 1 1 0 Fels-1 Prophage Protein-like RCC1 PF00415.18 NODE_65410_length_245_cov_1.961905_g57469_i0forward_frame_3 - 4.8e-15 55.9 0.1 2.4e-10 40.9 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_65410_length_245_cov_1.961905_g57469_i0forward_frame_3 - 4.2e-13 48.7 3.9 3.9e-09 36.1 0.0 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat APOBEC1 PF18769.1 NODE_65409_length_245_cov_1.961905_g57468_i0forward_frame_2 - 0.057 13.7 0.2 0.059 13.6 0.2 1.2 1 0 0 1 1 1 0 APOBEC1 NAD_binding_11 PF14833.6 NODE_65404_length_245_cov_2.104762_g57463_i0reverse_frame_3 - 1.3e-12 48.0 0.0 1.4e-12 47.9 0.0 1.0 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DUF3081 PF11280.8 NODE_65404_length_245_cov_2.104762_g57463_i0reverse_frame_3 - 0.074 12.9 0.0 0.098 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3081) Phage_antiter_Q PF06323.11 NODE_65404_length_245_cov_2.104762_g57463_i0reverse_frame_2 - 0.012 15.2 0.6 0.012 15.1 0.6 1.1 1 0 0 1 1 1 0 Phage antitermination protein Q Arteri_nsp7a PF16749.5 NODE_65402_length_245_cov_2.214286_g57461_i0reverse_frame_2 - 0.055 13.7 0.0 0.055 13.7 0.0 1.1 1 0 0 1 1 1 0 Arterivirus nonstructural protein 7 alpha Glycophorin_A PF01102.18 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.0036 17.5 0.2 0.004 17.4 0.2 1.1 1 0 0 1 1 1 1 Glycophorin A Mid2 PF04478.12 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.021 14.6 3.9 0.024 14.5 3.9 1.1 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor TMEM154 PF15102.6 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.025 14.5 1.3 0.027 14.4 1.3 1.1 1 0 0 1 1 1 0 TMEM154 protein family Orf78 PF06024.12 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.036 14.3 0.7 0.041 14.2 0.7 1.1 1 0 0 1 1 1 0 Orf78 (ac78) Shisa PF13908.6 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.038 14.2 1.1 0.042 14.1 1.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator HCMV_UL124 PF17609.2 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.055 13.7 2.1 0.061 13.5 2.1 1.0 1 0 0 1 1 1 0 Family of unknown function Hydrophobin_2 PF06766.11 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.093 12.7 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Fungal hydrophobin EVI2A PF05399.11 NODE_65401_length_245_cov_2.228571_g57460_i0reverse_frame_3 - 0.2 11.2 2.9 0.25 10.9 2.9 1.1 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Atracotoxin PF05353.11 NODE_65399_length_245_cov_2.285714_g57458_i0reverse_frame_3 - 2.6 8.2 10.7 0.095 12.8 4.3 2.0 2 1 0 2 2 2 0 Delta Atracotoxin NdhL PF10716.9 NODE_65398_length_245_cov_2.323810_g57457_i0reverse_frame_2 - 0.0028 17.6 0.9 0.0034 17.3 0.9 1.1 1 0 0 1 1 1 1 NADH dehydrogenase transmembrane subunit Slp PF03843.13 NODE_65395_length_245_cov_2.457143_g57454_i0reverse_frame_2 - 0.0083 15.5 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 Outer membrane lipoprotein Slp family zf-C2HC5 PF06221.13 NODE_65395_length_245_cov_2.457143_g57454_i0forward_frame_2 - 0.0019 18.1 2.7 0.0019 18.1 2.7 1.5 2 0 0 2 2 2 1 Putative zinc finger motif, C2HC5-type Cor1 PF04803.12 NODE_65393_length_245_cov_2.476190_g57452_i0forward_frame_2 - 0.67 10.2 6.6 0.49 10.6 0.8 2.0 1 1 1 2 2 2 0 Cor1/Xlr/Xmr conserved region DUF728 PF05304.12 NODE_65391_length_245_cov_2.500000_g57450_i0reverse_frame_3 - 0.1 12.5 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF728) Asp5 PF17000.5 NODE_65391_length_245_cov_2.500000_g57450_i0forward_frame_3 - 0.043 13.9 0.1 0.078 13.1 0.0 1.5 1 1 0 1 1 1 0 Accessory secretory protein Sec, Asp5 DUF478 PF04334.12 NODE_65389_length_245_cov_2.547619_g57448_i0reverse_frame_3 - 0.017 15.1 0.3 0.025 14.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF478) DUF927 PF06048.11 NODE_65389_length_245_cov_2.547619_g57448_i0reverse_frame_2 - 0.024 14.2 0.3 0.027 14.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF927) DUF3099 PF11298.8 NODE_65389_length_245_cov_2.547619_g57448_i0forward_frame_3 - 0.76 10.0 2.6 1.1 9.4 2.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) CSD PF00313.22 NODE_65388_length_245_cov_2.561905_g57447_i0forward_frame_3 - 1.7e-20 72.6 0.0 2.1e-20 72.3 0.0 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain LPG_synthase_TM PF03706.13 NODE_65386_length_245_cov_2.600000_g57445_i0forward_frame_2 - 2.5e-06 27.3 6.2 2.9e-06 27.1 6.2 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Arfaptin PF06456.13 NODE_65384_length_245_cov_2.619048_g57443_i0forward_frame_3 - 0.048 13.2 0.2 0.058 12.9 0.2 1.1 1 0 0 1 1 1 0 Arfaptin-like domain ATP-grasp_2 PF08442.10 NODE_65382_length_245_cov_2.661905_g57441_i0forward_frame_2 - 6.1e-12 45.5 0.0 6.9e-12 45.3 0.0 1.0 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 NODE_65382_length_245_cov_2.661905_g57441_i0forward_frame_2 - 0.16 11.4 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 ATP-grasp domain Comm PF15957.5 NODE_65381_length_245_cov_2.700000_g57440_i0reverse_frame_2 - 0.33 11.3 4.9 0.34 11.3 4.9 1.2 1 0 0 1 1 1 0 Commissureless RBB1NT PF08169.11 NODE_65381_length_245_cov_2.700000_g57440_i0forward_frame_3 - 0.026 14.7 0.6 0.046 13.9 0.3 1.6 1 1 1 2 2 2 0 RBB1NT (NUC162) domain DUF3452 PF11934.8 NODE_65381_length_245_cov_2.700000_g57440_i0forward_frame_3 - 0.04 13.5 0.2 0.05 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) SurE PF01975.17 NODE_65378_length_245_cov_2.876190_g57437_i0reverse_frame_3 - 0.2 11.4 0.0 0.23 11.2 0.0 1.0 1 0 0 1 1 1 0 Survival protein SurE Suppressor_APC PF11414.8 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.002 18.2 2.2 0.0031 17.5 2.1 1.5 1 1 0 1 1 1 1 Adenomatous polyposis coli tumour suppressor protein DUF5082 PF16888.5 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.018 15.3 8.7 0.18 12.1 2.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Lectin_N PF03954.14 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.025 14.3 1.6 0.03 14.1 1.6 1.2 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain Desmo_N PF06771.11 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.025 14.9 0.9 0.34 11.3 0.1 2.0 1 1 1 2 2 2 0 Viral Desmoplakin N-terminus ADIP PF11559.8 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.027 14.5 9.3 0.031 14.3 9.3 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding AFP_2 PF18815.1 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.11 12.8 2.1 0.59 10.4 0.9 2.2 2 0 0 2 2 2 0 Bacterial antifreeze protein repeat PKcGMP_CC PF16808.5 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.11 12.4 16.1 0.23 11.3 6.1 3.4 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase LMP PF04778.12 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.19 11.6 7.9 0.22 11.4 7.9 1.0 1 0 0 1 1 1 0 LMP repeated region DUF3573 PF12097.8 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.21 10.4 1.1 0.21 10.4 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DUF4094 PF13334.6 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.23 11.9 6.4 1.5 9.3 6.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) YvrJ PF12841.7 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.26 10.8 2.1 0.38 10.3 0.1 2.0 2 0 0 2 2 2 0 YvrJ protein family HXXSHH PF07586.11 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.32 10.5 3.7 0.84 9.2 1.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1552) FlxA PF14282.6 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.35 10.9 7.7 0.48 10.5 7.7 1.2 1 0 0 1 1 1 0 FlxA-like protein Csm1_N PF18504.1 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.39 11.1 12.1 0.67 10.3 4.1 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain FAM76 PF16046.5 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.53 9.6 5.6 0.89 8.9 5.6 1.3 1 1 0 1 1 1 0 FAM76 protein Tho2 PF11262.8 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 0.69 9.1 8.7 0.81 8.8 8.7 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 BST2 PF16716.5 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 1.1 9.9 10.7 5.9 7.6 2.9 2.1 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 V_ATPase_I PF01496.19 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 1.5 6.7 6.7 1.6 6.5 6.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FapA PF03961.13 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 1.9 7.0 10.8 2.2 6.8 10.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 2.2 7.3 8.2 2.2 7.3 8.2 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 XhlA PF10779.9 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 2.3 8.5 8.5 0.86 9.8 1.6 2.2 2 0 0 2 2 2 0 Haemolysin XhlA Spc24 PF08286.11 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 5.3 7.3 11.3 1 9.7 4.5 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 LapA_dom PF06305.11 NODE_65374_length_245_cov_3.019048_g57433_i0reverse_frame_3 - 8.2 6.3 5.5 30 4.5 1.8 2.1 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Neur_chan_memb PF02932.16 NODE_65368_length_245_cov_3.738095_g57427_i0reverse_frame_3 - 8.4e-11 42.4 0.4 9.4e-11 42.2 0.4 1.0 1 0 0 1 1 1 1 Neurotransmitter-gated ion-channel transmembrane region GWT1 PF06423.12 NODE_65368_length_245_cov_3.738095_g57427_i0reverse_frame_3 - 0.074 13.2 0.9 0.073 13.2 0.9 1.1 1 0 0 1 1 1 0 GWT1 L_HMGIC_fpl PF10242.9 NODE_65368_length_245_cov_3.738095_g57427_i0forward_frame_2 - 0.022 15.0 0.1 0.023 14.9 0.1 1.0 1 0 0 1 1 1 0 Lipoma HMGIC fusion partner-like protein Auxin_inducible PF02519.14 NODE_65366_length_245_cov_4.452381_g57425_i0reverse_frame_3 - 0.029 14.5 0.2 0.036 14.2 0.2 1.2 1 0 0 1 1 1 0 Auxin responsive protein Cytokin_check_N PF10407.9 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_2 - 0.058 13.4 0.1 3.6 7.6 0.0 2.1 2 0 0 2 2 2 0 Cdc14 phosphatase binding protein N-terminus DUF3738 PF12543.8 NODE_65364_length_245_cov_5.128571_g57423_i0reverse_frame_2 - 0.31 11.2 5.6 16 5.6 0.3 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3738) SRP68 PF16969.5 NODE_65361_length_245_cov_18.028571_g57420_i0forward_frame_2 - 0.74 8.7 2.4 0.9 8.5 2.4 1.0 1 0 0 1 1 1 0 RNA-binding signal recognition particle 68 Importin_rep PF18773.1 NODE_65354_length_245_cov_31.147619_g57413_i0reverse_frame_2 - 0.099 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Importin 13 repeat Gaa1 PF04114.14 NODE_65352_length_245_cov_35.176190_g57411_i0reverse_frame_2 - 0.17 10.9 0.1 0.15 11.0 0.1 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component FliC_SP PF12613.8 NODE_65352_length_245_cov_35.176190_g57411_i0forward_frame_3 - 1.7 9.2 8.6 0.65 10.5 5.7 1.7 1 1 1 2 2 2 0 Flagellin structural protein UPF0158 PF03682.13 NODE_65350_length_245_cov_37.957143_g57409_i0reverse_frame_3 - 0.01 15.8 0.1 0.013 15.5 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) Chorion_2 PF03964.15 NODE_65347_length_245_cov_42.671429_g57406_i0reverse_frame_2 - 0.27 12.1 12.6 0.9 10.4 12.7 1.7 1 1 0 1 1 1 0 Chorion family 2 DUF2514 PF10721.9 NODE_65347_length_245_cov_42.671429_g57406_i0forward_frame_3 - 0.0051 16.8 1.1 0.0072 16.4 1.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2514) RIG-I_C-RD PF11648.8 NODE_65345_length_245_cov_44.266667_g57404_i0forward_frame_3 - 0.06 13.6 0.0 0.061 13.6 0.0 1.1 1 0 0 1 1 1 0 C-terminal domain of RIG-I Glycos_transf_2 PF00535.26 NODE_65343_length_245_cov_46.166667_g57402_i0forward_frame_3 - 0.17 11.7 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 PUMA PF15826.5 NODE_65341_length_245_cov_50.585714_g57400_i0forward_frame_2 - 0.15 12.2 1.2 0.17 12.0 1.2 1.0 1 0 0 1 1 1 0 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis TrkA_N PF02254.18 NODE_65336_length_245_cov_56.885714_g57395_i0forward_frame_3 - 0.049 13.9 0.0 0.056 13.7 0.0 1.0 1 0 0 1 1 1 0 TrkA-N domain KH_9 PF17904.1 NODE_65334_length_245_cov_58.557143_g57393_i0forward_frame_3 - 0.041 14.2 0.0 0.072 13.5 0.0 1.3 1 0 0 1 1 1 0 FMRP KH0 domain CtIP_N PF10482.9 NODE_65334_length_245_cov_58.557143_g57393_i0forward_frame_3 - 0.17 11.9 0.7 0.2 11.7 0.7 1.2 1 0 0 1 1 1 0 Tumour-suppressor protein CtIP N-terminal domain Herpes_gI PF01688.17 NODE_65332_length_245_cov_60.490476_g57391_i0reverse_frame_2 - 0.034 14.1 0.2 0.04 13.8 0.2 1.1 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein I vMSA PF00695.19 NODE_65332_length_245_cov_60.490476_g57391_i0forward_frame_3 - 0.53 9.3 5.6 0.61 9.1 5.6 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus JmjC PF02373.22 NODE_65332_length_245_cov_60.490476_g57391_i0forward_frame_2 - 4e-06 27.2 0.1 7.2e-06 26.4 0.1 1.4 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_1 PF00190.22 NODE_65332_length_245_cov_60.490476_g57391_i0forward_frame_2 - 0.00055 19.6 0.0 0.00058 19.5 0.0 1.1 1 0 0 1 1 1 1 Cupin Cupin_2 PF07883.11 NODE_65332_length_245_cov_60.490476_g57391_i0forward_frame_2 - 0.01 15.5 0.1 0.017 14.9 0.0 1.4 1 1 0 1 1 1 0 Cupin domain Man-6-P_recep PF02157.15 NODE_65331_length_245_cov_61.780952_g57390_i0forward_frame_3 - 0.76 8.8 2.5 0.91 8.6 2.5 1.0 1 0 0 1 1 1 0 Mannose-6-phosphate receptor CSRNP_N PF16019.5 NODE_65330_length_245_cov_61.852381_g57389_i0reverse_frame_3 - 0.088 12.7 2.3 0.11 12.4 2.3 1.0 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus DUF2939 PF11159.8 NODE_65330_length_245_cov_61.852381_g57389_i0forward_frame_3 - 0.083 13.3 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2939) DUF4051 PF13260.6 NODE_65330_length_245_cov_61.852381_g57389_i0forward_frame_2 - 0.19 11.5 0.3 0.36 10.6 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) Acyl-CoA_ox_N PF14749.6 NODE_65329_length_245_cov_63.452381_g57388_i0forward_frame_3 - 0.022 15.3 0.5 0.025 15.2 0.5 1.1 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal PPV_E1_C PF00519.17 NODE_65325_length_245_cov_67.157143_g57384_i0forward_frame_3 - 0.0039 16.1 0.1 0.0045 15.9 0.1 1.0 1 0 0 1 1 1 1 Papillomavirus helicase RhoGAP PF00620.27 NODE_65325_length_245_cov_67.157143_g57384_i0forward_frame_3 - 0.011 15.6 0.0 0.014 15.2 0.0 1.1 1 0 0 1 1 1 0 RhoGAP domain DUF4611 PF15387.6 NODE_65323_length_245_cov_82.495238_g57382_i0reverse_frame_2 - 0.32 11.2 11.3 0.38 11.0 10.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4611) PBP1_TM PF14812.6 NODE_65323_length_245_cov_82.495238_g57382_i0reverse_frame_2 - 0.41 11.1 4.0 0.54 10.7 4.0 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal TLP-20 PF06088.11 NODE_65323_length_245_cov_82.495238_g57382_i0reverse_frame_2 - 1.9 8.4 4.6 2.1 8.2 4.6 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) CDC45 PF02724.14 NODE_65323_length_245_cov_82.495238_g57382_i0reverse_frame_2 - 5.2 5.2 10.0 5.3 5.2 10.0 1.0 1 0 0 1 1 1 0 CDC45-like protein GAPT PF11770.8 NODE_65323_length_245_cov_82.495238_g57382_i0forward_frame_2 - 7.2 6.5 5.3 3.8 7.4 0.9 2.0 2 0 0 2 2 2 0 GRB2-binding adapter (GAPT) McyA_C PF12593.8 NODE_65314_length_245_cov_130.052381_g57373_i0reverse_frame_3 - 0.0091 15.8 1.1 0.034 13.9 0.0 2.3 3 0 0 3 3 3 1 Microcystin synthetase C terminal AP3D1 PF06375.11 NODE_65313_length_245_cov_131.971429_g57372_i0reverse_frame_3 - 0.11 12.8 7.1 0.12 12.6 7.1 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF4710 PF15828.5 NODE_65313_length_245_cov_131.971429_g57372_i0reverse_frame_2 - 0.16 12.1 11.1 0.23 11.6 11.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) zf-LITAF-like PF10601.9 NODE_65313_length_245_cov_131.971429_g57372_i0forward_frame_3 - 6.4 7.1 5.2 9.1 6.6 5.2 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain Prokineticin PF06607.11 NODE_65312_length_245_cov_134.280952_g57371_i0forward_frame_2 - 0.02 15.2 0.5 0.025 14.9 0.5 1.2 1 0 0 1 1 1 0 Prokineticin DUF1907 PF08925.11 NODE_65309_length_245_cov_167.495238_g57368_i0forward_frame_3 - 0.092 12.2 0.0 0.1 12.0 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1907) CDC37_M PF08565.11 NODE_65307_length_245_cov_200.866667_g57366_i0forward_frame_3 - 0.031 14.2 0.4 0.04 13.8 0.3 1.4 1 1 0 1 1 1 0 Cdc37 Hsp90 binding domain Rbx_binding PF18113.1 NODE_65306_length_245_cov_225.690476_g57365_i0forward_frame_2 - 0.2 11.5 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Rubredoxin binding C-terminal domain zf-RING_6 PF14835.6 NODE_65305_length_245_cov_230.585714_g57364_i0forward_frame_3 - 0.072 13.0 0.8 0.14 12.1 0.1 1.7 1 1 1 2 2 2 0 zf-RING of BARD1-type protein PcrB PF01884.17 NODE_65305_length_245_cov_230.585714_g57364_i0forward_frame_3 - 0.19 11.2 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 PcrB family Colicin_K PF17500.2 NODE_65303_length_245_cov_2418.600000_g57362_i0reverse_frame_3 - 1.6 9.3 10.9 6.2 7.4 10.9 1.8 1 1 0 1 1 1 0 Colicin-K Melittin PF01372.17 NODE_65303_length_245_cov_2418.600000_g57362_i0forward_frame_2 - 3.2 7.9 5.4 8.7 6.5 0.5 2.3 2 0 0 2 2 2 0 Melittin Antistasin PF02822.14 NODE_65302_length_246_cov_0.758294_g57361_i0reverse_frame_3 - 0.16 12.6 2.9 0.16 12.6 2.9 1.8 2 1 0 2 2 2 0 Antistasin family zf-C3Hc3H PF13891.6 NODE_65301_length_246_cov_0.881517_g57360_i0reverse_frame_3 - 0.046 14.1 0.7 0.066 13.6 0.7 1.2 1 0 0 1 1 1 0 Potential DNA-binding domain DUF4525 PF15027.6 NODE_65300_length_246_cov_0.943128_g57359_i0reverse_frame_2 - 0.075 12.8 0.0 0.087 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) SNURF PF07192.11 NODE_65299_length_246_cov_0.947867_g57358_i0forward_frame_2 - 0.059 13.2 1.1 0.087 12.7 1.1 1.2 1 0 0 1 1 1 0 SNURF/RPN4 protein zf_PR_Knuckle PF18445.1 NODE_65297_length_246_cov_1.037915_g57356_i0reverse_frame_2 - 0.16 11.8 0.7 0.16 11.8 0.7 2.5 3 0 0 3 3 3 0 PR zinc knuckle motif Cytochrom_B558a PF05038.13 NODE_65297_length_246_cov_1.037915_g57356_i0forward_frame_3 - 0.043 13.4 0.0 0.046 13.3 0.0 1.0 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit Herpes_IE68 PF02479.16 NODE_65295_length_246_cov_1.056872_g57354_i0forward_frame_3 - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus immediate early protein MFS_1 PF07690.16 NODE_65293_length_246_cov_1.061611_g57352_i0forward_frame_3 - 0.071 12.0 5.8 0.075 11.9 5.8 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF2101 PF09874.9 NODE_65291_length_246_cov_1.104265_g57350_i0forward_frame_2 - 0.036 13.8 0.1 0.043 13.5 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Selenoprotein_S PF06936.11 NODE_65289_length_246_cov_1.132701_g57348_i0reverse_frame_3 - 0.34 10.7 1.7 0.41 10.4 1.7 1.2 1 1 0 1 1 1 0 Selenoprotein S (SelS) DUF1543 PF07566.12 NODE_65289_length_246_cov_1.132701_g57348_i0reverse_frame_2 - 0.04 13.6 0.0 0.053 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1543) Fer4_4 PF12800.7 NODE_65289_length_246_cov_1.132701_g57348_i0forward_frame_3 - 4.8 7.9 8.4 0.85 10.3 3.0 2.4 4 0 0 4 4 4 0 4Fe-4S binding domain WSK PF03832.13 NODE_65287_length_246_cov_1.132701_g57346_i0forward_frame_3 - 0.92 9.3 5.3 1.5 8.6 5.3 1.2 1 0 0 1 1 1 0 WSK motif DUF1098 PF06497.11 NODE_65286_length_246_cov_1.137441_g57345_i0reverse_frame_2 - 0.079 13.4 0.0 0.095 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1098) stn_TNFRSF12A PF12191.8 NODE_65282_length_246_cov_1.175355_g57341_i0reverse_frame_2 - 0.031 14.5 0.0 0.034 14.4 0.0 1.2 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain AA_permease_C PF13906.6 NODE_65279_length_246_cov_1.246445_g57338_i0reverse_frame_2 - 3.1 7.9 6.7 0.2 11.7 1.7 1.7 2 0 0 2 2 2 0 C-terminus of AA_permease Tmemb_55A PF09788.9 NODE_65279_length_246_cov_1.246445_g57338_i0forward_frame_2 - 0.0065 15.6 2.5 0.0072 15.4 2.5 1.1 1 0 0 1 1 1 1 Transmembrane protein 55A Conotoxin_I2 PF17557.2 NODE_65270_length_246_cov_1.383886_g57329_i0reverse_frame_2 - 0.21 11.7 16.5 0.38 10.9 16.5 1.4 1 0 0 1 1 1 0 I2-superfamily conotoxins PPI_Ypi1 PF07491.11 NODE_65264_length_246_cov_1.511848_g57323_i0forward_frame_2 - 0.33 10.8 3.0 0.19 11.6 1.0 1.7 2 0 0 2 2 2 0 Protein phosphatase inhibitor DUF934 PF06073.12 NODE_65261_length_246_cov_1.516588_g57320_i0forward_frame_3 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF934) MORN PF02493.20 NODE_65260_length_246_cov_1.516588_g57319_i0reverse_frame_3 - 1.3e-15 56.3 25.4 2.2e-05 24.1 4.4 4.0 4 0 0 4 4 4 4 MORN repeat ScdA_N PF04405.14 NODE_65258_length_246_cov_1.526066_g57317_i0forward_frame_3 - 2.3 8.0 5.4 2.7 7.7 0.6 2.2 2 0 0 2 2 2 0 Domain of Unknown function (DUF542) DUF5013 PF16405.5 NODE_65258_length_246_cov_1.526066_g57317_i0forward_frame_2 - 0.12 12.6 0.1 0.24 11.7 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5013) DUF1147 PF06615.11 NODE_65258_length_246_cov_1.526066_g57317_i0forward_frame_2 - 0.39 10.8 3.7 0.17 11.9 0.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1147) TF_Zn_Ribbon PF08271.12 NODE_65257_length_246_cov_1.545024_g57316_i0reverse_frame_2 - 0.061 12.9 0.2 0.099 12.2 0.2 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding Apelin PF15360.6 NODE_65254_length_246_cov_1.563981_g57313_i0reverse_frame_2 - 0.042 14.4 0.2 0.064 13.8 0.2 1.3 1 0 0 1 1 1 0 APJ endogenous ligand adh_short_C2 PF13561.6 NODE_65253_length_246_cov_1.563981_g57312_i0forward_frame_2 - 0.2 11.2 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Stb3 PF10330.9 NODE_65252_length_246_cov_1.573460_g57311_i0forward_frame_2 - 0.039 14.0 0.1 0.053 13.6 0.1 1.1 1 0 0 1 1 1 0 Putative Sin3 binding protein RCC1 PF00415.18 NODE_65251_length_246_cov_1.573460_g57310_i0reverse_frame_2 - 2.5e-18 66.4 6.1 1.2e-14 54.6 0.8 2.3 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_65251_length_246_cov_1.573460_g57310_i0reverse_frame_2 - 5.6e-15 54.7 5.4 1e-08 34.7 0.6 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF1181 PF06680.11 NODE_65251_length_246_cov_1.573460_g57310_i0reverse_frame_2 - 0.05 13.4 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1181) DUF3696 PF12476.8 NODE_65251_length_246_cov_1.573460_g57310_i0reverse_frame_2 - 0.15 12.5 0.0 0.21 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3696) Aldo_ket_red PF00248.21 NODE_65249_length_246_cov_1.592417_g57308_i0reverse_frame_3 - 8.8e-10 38.3 0.0 9.1e-10 38.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family RsgA_GTPase PF03193.16 NODE_65246_length_246_cov_1.654028_g57305_i0reverse_frame_3 - 0.14 12.1 0.0 0.15 12.0 0.0 1.0 1 0 0 1 1 1 0 RsgA GTPase ER_lumen_recept PF00810.18 NODE_65244_length_246_cov_1.677725_g57303_i0reverse_frame_3 - 0.0044 17.8 3.7 0.0048 17.7 3.7 1.0 1 0 0 1 1 1 1 ER lumen protein retaining receptor PH_13 PF16652.5 NODE_65243_length_246_cov_1.748815_g57302_i0forward_frame_3 - 0.1 12.4 0.1 0.14 12.0 0.1 1.3 1 1 0 1 1 1 0 Pleckstrin homology domain ArsA_HSP20 PF17886.1 NODE_65240_length_246_cov_1.791469_g57299_i0forward_frame_3 - 0.05 13.2 0.1 0.67 9.6 0.1 2.0 1 1 1 2 2 2 0 HSP20-like domain found in ArsA Herpes_UL51 PF04540.13 NODE_65235_length_246_cov_1.876777_g57294_i0forward_frame_2 - 0.12 12.1 0.0 0.14 11.9 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL51 protein PH_3 PF14593.6 NODE_65234_length_246_cov_1.881517_g57293_i0forward_frame_2 - 0.065 13.3 0.1 0.082 13.0 0.1 1.1 1 0 0 1 1 1 0 PH domain aGPT-Pplase3 PF18746.1 NODE_65234_length_246_cov_1.881517_g57293_i0forward_frame_2 - 0.15 11.4 0.0 0.16 11.3 0.0 1.0 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 Thioesterase PF00975.20 NODE_65233_length_246_cov_1.886256_g57292_i0reverse_frame_3 - 0.17 12.0 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Thioesterase domain 2OG-FeII_Oxy_3 PF13640.6 NODE_65233_length_246_cov_1.886256_g57292_i0forward_frame_3 - 0.0076 17.1 0.0 0.0081 17.0 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily YidD PF01809.18 NODE_65233_length_246_cov_1.886256_g57292_i0forward_frame_2 - 0.052 13.4 1.2 0.11 12.4 1.2 1.6 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor NICE-1 PF15845.5 NODE_65233_length_246_cov_1.886256_g57292_i0forward_frame_2 - 0.11 13.3 9.9 0.083 13.7 8.7 1.4 1 1 0 1 1 1 0 Cysteine-rich C-terminal 1 family UXS1_N PF11803.8 NODE_65231_length_246_cov_1.914692_g57290_i0reverse_frame_3 - 0.043 14.2 0.3 0.052 13.9 0.3 1.1 1 0 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal Colipase PF01114.18 NODE_65230_length_246_cov_1.924171_g57289_i0reverse_frame_2 - 0.16 11.6 2.7 0.37 10.5 2.7 1.6 1 1 0 1 1 1 0 Colipase, N-terminal domain DUF2232 PF09991.9 NODE_65229_length_246_cov_1.933649_g57288_i0forward_frame_3 - 0.15 11.3 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2232) DUF4528 PF15031.6 NODE_65227_length_246_cov_1.976303_g57286_i0forward_frame_3 - 0.051 13.6 0.0 0.054 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) Agenet PF05641.12 NODE_65223_length_246_cov_2.004739_g57282_i0reverse_frame_2 - 0.057 13.9 0.1 0.071 13.6 0.1 1.3 1 0 0 1 1 1 0 Agenet domain Nore1-SARAH PF16517.5 NODE_65223_length_246_cov_2.004739_g57282_i0reverse_frame_2 - 0.091 12.7 3.2 0.15 12.0 3.2 1.3 1 0 0 1 1 1 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain SUIM_assoc PF16619.5 NODE_65221_length_246_cov_2.037915_g57280_i0reverse_frame_3 - 5 7.3 9.6 8 6.6 9.6 1.4 1 0 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 DUF2574 PF10836.8 NODE_65221_length_246_cov_2.037915_g57280_i0reverse_frame_2 - 0.098 12.5 0.2 0.12 12.2 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) C_tripleX PF02363.19 NODE_65220_length_246_cov_2.042654_g57279_i0reverse_frame_3 - 1.3 9.4 16.2 0.44 10.9 12.5 2.1 2 0 0 2 2 2 0 Cysteine rich repeat OmpA PF00691.20 NODE_65219_length_246_cov_2.075829_g57278_i0forward_frame_2 - 0.016 15.6 0.2 0.02 15.2 0.2 1.1 1 0 0 1 1 1 0 OmpA family DUF2529 PF10740.9 NODE_65219_length_246_cov_2.075829_g57278_i0forward_frame_2 - 0.049 13.3 0.0 0.052 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) Calpain_III PF01067.22 NODE_65218_length_246_cov_2.075829_g57277_i0forward_frame_3 - 0.13 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Calpain large subunit, domain III SWIRM PF04433.17 NODE_65213_length_246_cov_2.184834_g57272_i0reverse_frame_3 - 0.036 14.4 0.3 0.051 13.9 0.3 1.3 1 1 0 1 1 1 0 SWIRM domain DUF4191 PF13829.6 NODE_65213_length_246_cov_2.184834_g57272_i0forward_frame_3 - 0.18 11.1 0.1 0.19 11.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) zf-primase PF09329.11 NODE_65212_length_246_cov_2.184834_g57271_i0forward_frame_2 - 0.095 12.5 1.0 0.15 11.9 1.0 1.2 1 0 0 1 1 1 0 Primase zinc finger AA_permease_2 PF13520.6 NODE_65209_length_246_cov_2.279621_g57268_i0forward_frame_3 - 2.8e-12 46.2 7.7 2.9e-12 46.2 7.7 1.0 1 0 0 1 1 1 1 Amino acid permease Anoctamin PF04547.12 NODE_65209_length_246_cov_2.279621_g57268_i0forward_frame_3 - 0.003 16.5 8.0 0.0034 16.3 8.0 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel Glyco_hydro_31 PF01055.26 NODE_65207_length_246_cov_2.322275_g57266_i0forward_frame_2 - 9.4e-22 77.8 0.1 9.4e-22 77.8 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Methyltrn_RNA_2 PF04013.12 NODE_65206_length_246_cov_2.388626_g57265_i0reverse_frame_2 - 0.019 14.7 0.1 0.021 14.5 0.1 1.1 1 0 0 1 1 1 0 Putative SAM-dependent RNA methyltransferase BDV_P10 PF06515.11 NODE_65205_length_246_cov_2.417062_g57264_i0reverse_frame_3 - 0.058 13.4 0.2 0.072 13.1 0.2 1.2 1 0 0 1 1 1 0 Borna disease virus P10 protein MOSC_N PF03476.16 NODE_65205_length_246_cov_2.417062_g57264_i0reverse_frame_2 - 0.11 12.3 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 MOSC N-terminal beta barrel domain Lipin_mid PF16876.5 NODE_65200_length_246_cov_2.535545_g57259_i0reverse_frame_2 - 0.16 12.1 0.5 0.18 12.0 0.5 1.1 1 0 0 1 1 1 0 Lipin/Ned1/Smp2 multi-domain protein middle domain CTK3_C PF12350.8 NODE_65199_length_246_cov_2.568720_g57258_i0forward_frame_2 - 0.11 12.6 2.2 0.17 12.0 2.2 1.3 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 C-terminus WASH-7_mid PF14744.6 NODE_65196_length_246_cov_2.597156_g57255_i0reverse_frame_3 - 4.5e-20 72.0 1.0 4.7e-20 72.0 1.0 1.0 1 0 0 1 1 1 1 WASH complex subunit 7 Globin PF00042.22 NODE_65195_length_246_cov_2.668246_g57254_i0forward_frame_2 - 0.027 15.0 0.1 0.033 14.7 0.1 1.1 1 0 0 1 1 1 0 Globin Tagatose_6_P_K PF08013.11 NODE_65194_length_246_cov_2.725118_g57253_i0forward_frame_3 - 1e-31 110.1 0.2 1.1e-31 110.0 0.2 1.0 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase HCV_NS5a_1a PF08300.13 NODE_65194_length_246_cov_2.725118_g57253_i0forward_frame_2 - 0.23 11.6 2.9 0.27 11.4 2.2 1.5 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a zinc finger domain DUF2207 PF09972.9 NODE_65191_length_246_cov_2.848341_g57250_i0forward_frame_2 - 0.074 11.8 4.5 0.076 11.8 4.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1129 PF06570.11 NODE_65191_length_246_cov_2.848341_g57250_i0forward_frame_2 - 0.22 11.0 4.3 0.22 11.0 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) EMP70 PF02990.16 NODE_65191_length_246_cov_2.848341_g57250_i0forward_frame_2 - 0.32 9.6 4.6 0.36 9.4 4.6 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 Pox_P21 PF05313.12 NODE_65191_length_246_cov_2.848341_g57250_i0forward_frame_2 - 1.7 8.2 8.0 1.6 8.2 8.0 1.1 1 0 0 1 1 1 0 Poxvirus P21 membrane protein Pex24p PF06398.11 NODE_65191_length_246_cov_2.848341_g57250_i0forward_frame_2 - 4.5 6.2 5.5 4.7 6.1 5.5 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin CAMSAP_CKK PF08683.11 NODE_65189_length_246_cov_2.895735_g57248_i0reverse_frame_2 - 2.5e-12 47.0 0.2 2.9e-12 46.8 0.2 1.0 1 0 0 1 1 1 1 Microtubule-binding calmodulin-regulated spectrin-associated DUF2895 PF11444.8 NODE_65187_length_246_cov_2.914692_g57246_i0reverse_frame_2 - 0.094 12.1 0.1 0.095 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2895) TMEM52 PF14979.6 NODE_65183_length_246_cov_3.071090_g57242_i0forward_frame_2 - 0.29 11.1 0.8 0.36 10.7 0.8 1.1 1 0 0 1 1 1 0 Transmembrane 52 Homez PF11569.8 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.00035 20.0 0.2 0.00046 19.6 0.2 1.2 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez HTH_28 PF13518.6 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.031 14.4 0.0 0.046 13.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.038 13.8 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Homeodomain PF00046.29 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.049 13.5 0.1 0.078 12.8 0.1 1.4 1 0 0 1 1 1 0 Homeodomain RepB-RCR_reg PF10723.9 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.086 12.8 0.1 0.14 12.2 0.0 1.5 2 0 0 2 2 2 0 Replication regulatory protein RepB DUF3562 PF12085.8 NODE_65179_length_246_cov_3.436019_g57238_i0forward_frame_2 - 0.17 11.5 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) Laminin_B PF00052.18 NODE_65177_length_246_cov_3.905213_g57236_i0reverse_frame_3 - 0.021 14.7 0.0 0.024 14.5 0.0 1.0 1 0 0 1 1 1 0 Laminin B (Domain IV) DUF3789 PF12664.7 NODE_65176_length_246_cov_6.056872_g57235_i0reverse_frame_3 - 0.0018 17.9 4.4 0.11 12.2 0.2 2.6 3 0 0 3 3 3 2 Protein of unknown function (DUF3789) Asparaginase_C PF17763.1 NODE_65176_length_246_cov_6.056872_g57235_i0reverse_frame_3 - 0.071 13.3 0.1 0.081 13.1 0.1 1.1 1 0 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain Isochorismatase PF00857.20 NODE_65176_length_246_cov_6.056872_g57235_i0reverse_frame_3 - 0.28 11.3 1.3 8.1 6.6 0.0 2.1 2 0 0 2 2 2 0 Isochorismatase family DUF3112 PF11309.8 NODE_65175_length_246_cov_25.535545_g57234_i0forward_frame_3 - 0.041 13.3 0.4 0.047 13.1 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) Pet100 PF09803.9 NODE_65175_length_246_cov_25.535545_g57234_i0forward_frame_2 - 0.00093 19.7 0.3 0.0012 19.3 0.3 1.2 1 0 0 1 1 1 1 Pet100 Ac76 PF05814.11 NODE_65175_length_246_cov_25.535545_g57234_i0forward_frame_2 - 3.5 7.7 7.7 6.1 6.9 7.7 1.5 1 1 0 1 1 1 0 Orf76 (Ac76) Tryp_alpha_amyl PF00234.22 NODE_65174_length_246_cov_25.914692_g57233_i0forward_frame_3 - 0.013 15.9 1.7 0.026 14.9 1.7 1.5 1 1 0 1 1 1 0 Protease inhibitor/seed storage/LTP family Tnp_22_trimer PF17489.2 NODE_65172_length_246_cov_36.796209_g57231_i0reverse_frame_2 - 0.081 12.9 0.7 0.081 12.9 0.7 2.5 3 0 0 3 3 3 0 L1 transposable element trimerization domain FAM199X PF15814.5 NODE_65169_length_246_cov_41.127962_g57228_i0forward_frame_3 - 0.33 10.0 7.8 0.34 9.9 7.8 1.0 1 0 0 1 1 1 0 Protein family FAM199X LZ3wCH PF18517.1 NODE_65166_length_246_cov_44.767773_g57225_i0reverse_frame_2 - 0.18 11.9 0.0 0.26 11.4 0.0 1.2 1 0 0 1 1 1 0 Leucine zipper with capping helix domain MscL PF01741.18 NODE_65164_length_246_cov_46.369668_g57223_i0forward_frame_3 - 0.0091 16.3 0.1 0.0096 16.2 0.1 1.1 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL DUF4083 PF13314.6 NODE_65164_length_246_cov_46.369668_g57223_i0forward_frame_3 - 0.15 12.0 3.2 0.22 11.5 3.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) CHASE3 PF05227.13 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.012 15.5 2.8 0.013 15.5 2.8 1.1 1 0 0 1 1 1 0 CHASE3 domain OST_P2 PF18235.1 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.015 15.3 1.3 0.017 15.1 1.3 1.1 1 0 0 1 1 1 0 Oligosaccharyltransferase Peripheral 2 domain DUF5446 PF17522.2 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.11 12.6 6.4 0.21 11.8 4.0 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5446) DUF1690 PF07956.11 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.13 12.7 7.5 0.14 12.6 7.5 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) UPF0242 PF06785.11 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.41 10.7 11.1 0.46 10.6 11.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 0.44 9.1 9.6 0.48 9.0 9.6 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A YtxH PF12732.7 NODE_65163_length_246_cov_46.919431_g57222_i0forward_frame_3 - 4.8 7.8 8.5 36 5.0 8.5 2.0 1 1 0 1 1 1 0 YtxH-like protein Mtc PF03820.17 NODE_65161_length_246_cov_47.772512_g57220_i0forward_frame_3 - 0.0015 17.7 0.1 0.0017 17.4 0.1 1.1 1 0 0 1 1 1 1 Tricarboxylate carrier DUF5480 PF17576.2 NODE_65156_length_246_cov_57.535545_g57215_i0reverse_frame_2 - 3 7.9 5.9 0.67 10.0 2.1 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5480) M-factor PF03855.13 NODE_65149_length_246_cov_66.118483_g57208_i0forward_frame_2 - 0.027 14.6 0.0 0.039 14.1 0.0 1.3 1 0 0 1 1 1 0 M-factor zf-CCCH_3 PF15663.5 NODE_65148_length_246_cov_67.943128_g57207_i0forward_frame_3 - 0.085 13.1 1.2 0.1 12.8 1.2 1.1 1 0 0 1 1 1 0 Zinc-finger containing family DUF4363 PF14276.6 NODE_65147_length_246_cov_67.995261_g57206_i0reverse_frame_3 - 0.00077 19.6 1.0 0.00089 19.4 1.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4363) YolD PF08863.10 NODE_65147_length_246_cov_67.995261_g57206_i0reverse_frame_3 - 0.054 13.6 2.2 0.16 12.0 2.2 1.7 1 1 0 1 1 1 0 YolD-like protein DUF1827 PF08860.10 NODE_65146_length_246_cov_68.668246_g57205_i0reverse_frame_3 - 0.015 15.5 0.1 0.016 15.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1827) DUF3332 PF11810.8 NODE_65146_length_246_cov_68.668246_g57205_i0reverse_frame_3 - 0.079 12.6 0.0 0.095 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DAHP_synth_2 PF01474.16 NODE_65144_length_246_cov_71.113744_g57203_i0reverse_frame_2 - 3.4e-07 29.1 0.0 3.7e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 Class-II DAHP synthetase family Chordopox_A20R PF05941.13 NODE_65140_length_246_cov_79.232227_g57199_i0reverse_frame_2 - 0.098 11.6 0.1 0.11 11.4 0.1 1.1 1 0 0 1 1 1 0 Chordopoxvirus A20R protein FlaF PF07309.11 NODE_65139_length_246_cov_80.540284_g57198_i0reverse_frame_3 - 0.062 13.3 0.1 0.076 13.0 0.1 1.1 1 0 0 1 1 1 0 Flagellar protein FlaF PLA2_inh PF02988.15 NODE_65137_length_246_cov_90.379147_g57196_i0forward_frame_3 - 0.12 13.0 1.8 0.88 10.3 0.4 2.0 1 1 1 2 2 2 0 Phospholipase A2 inhibitor KdpC PF02669.15 NODE_65135_length_246_cov_100.018957_g57194_i0reverse_frame_2 - 0.099 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 K+-transporting ATPase, c chain Oxidored-like PF09791.9 NODE_65128_length_246_cov_141.720379_g57187_i0reverse_frame_2 - 0.56 9.9 5.4 1.1 9.0 5.4 1.4 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal Alg14 PF08660.11 NODE_65128_length_246_cov_141.720379_g57187_i0forward_frame_3 - 6.4e-06 26.2 0.0 9e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Oligosaccharide biosynthesis protein Alg14 like G10 PF01125.17 NODE_65121_length_246_cov_569.559242_g57180_i0reverse_frame_2 - 0.097 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 G10 protein APOBEC_C PF05240.14 NODE_65117_length_246_cov_3702.625592_g57176_i0forward_frame_2 - 0.072 13.1 0.4 0.14 12.2 0.2 1.5 1 1 0 1 1 1 0 APOBEC-like C-terminal domain TCR PF03638.15 ORF99182 - 0.5 10.7 16.5 0.75 10.1 7.2 2.3 1 1 1 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain Herpes_LMP1 PF05297.11 ORF99049 - 0.0032 16.7 0.5 0.0035 16.6 0.5 1.1 1 0 0 1 1 1 1 Herpesvirus latent membrane protein 1 (LMP1) Amnionless PF14828.6 ORF99049 - 0.092 11.6 0.0 0.092 11.6 0.0 1.1 1 0 0 1 1 1 0 Amnionless Phage_Gp23 PF10669.9 ORF99049 - 1.5 9.2 5.4 0.27 11.6 0.5 1.8 1 1 1 2 2 2 0 Protein gp23 (Bacteriophage A118) Vpu PF00558.19 ORF99049 - 4.4 7.1 10.2 0.53 10.1 3.2 2.0 1 1 1 2 2 2 0 Vpu protein Chloroa_b-bind PF00504.21 ORF98840 - 9.3e-08 32.8 0.0 9.3e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Trefoil PF00088.18 ORF98786 - 0.0046 16.8 0.9 0.011 15.6 0.3 1.8 2 0 0 2 2 2 1 Trefoil (P-type) domain Omega-toxin PF06357.11 ORF98786 - 0.035 13.9 1.1 0.048 13.4 1.1 1.3 1 0 0 1 1 1 0 Omega-atracotoxin Ribosomal_S27 PF01599.19 ORF98786 - 0.078 13.2 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S27a DUF2600 PF10776.9 ORF98570 - 0.041 12.8 0.1 0.041 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2600) Mannosyl_trans PF05007.13 ORF98453 - 0.013 15.4 2.6 0.016 15.1 2.6 1.0 1 0 0 1 1 1 0 Mannosyltransferase (PIG-M) Remorin_C PF03763.13 ORF98120 - 0.079 12.9 3.2 0.093 12.6 3.2 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region Calici_MSP PF05752.11 ORF98044 - 0.08 12.8 0.0 0.08 12.8 0.0 1.1 1 0 0 1 1 1 0 Calicivirus minor structural protein zf-LITAF-like PF10601.9 ORF97777 - 1.2e-11 44.6 9.9 1.4e-11 44.5 9.9 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Rhodanese_C PF12368.8 ORF97777 - 0.027 14.9 6.0 0.028 14.8 0.5 2.1 2 0 0 2 2 2 0 Rhodanase C-terminal Mut7-C PF01927.16 ORF97777 - 0.035 14.2 0.4 0.042 13.9 0.4 1.1 1 0 0 1 1 1 0 Mut7-C RNAse domain UvrB_inter PF17757.1 ORF97777 - 0.05 13.8 0.1 0.058 13.6 0.1 1.1 1 0 0 1 1 1 0 UvrB interaction domain PNP_UDP_1 PF01048.20 ORF97645 - 0.029 13.6 0.0 0.031 13.5 0.0 1.2 1 0 0 1 1 1 0 Phosphorylase superfamily STE PF02200.16 ORF97606 - 0.0019 18.6 0.2 0.0021 18.4 0.2 1.1 1 0 0 1 1 1 1 STE like transcription factor DUF4939 PF16297.5 ORF96902 - 0.013 15.4 0.1 0.015 15.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4939) DUF4219 PF13961.6 ORF96832 - 0.0067 16.1 0.2 0.011 15.4 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4219) UPF0542 PF15086.6 ORF96797 - 0.16 11.9 0.2 0.23 11.4 0.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 DUF2543 PF10820.8 ORF95380 - 9.7e-48 160.3 0.5 1.1e-47 160.2 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2543) NCE101 PF11654.8 ORF94767 - 0.18 11.5 1.7 0.63 9.8 1.7 1.9 1 1 0 1 1 1 0 Non-classical export protein 1 PP-binding PF00550.25 ORF94584 - 1.5e-10 41.3 0.0 1.7e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 Phosphopantetheine attachment site Glutaredoxin PF00462.24 ORF94505 - 0.0075 16.5 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin STE PF02200.16 ORF93972 - 0.0019 18.6 0.2 0.0021 18.4 0.2 1.1 1 0 0 1 1 1 1 STE like transcription factor RPN7 PF10602.9 ORF93607 - 0.053 13.2 2.1 1.4 8.5 0.6 2.1 1 1 1 2 2 2 0 26S proteasome subunit RPN7 DUF1664 PF07889.12 ORF93607 - 0.065 13.3 2.4 0.07 13.2 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Ribosomal_S18 PF01084.20 ORF93215 - 0.15 12.3 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S18 Asp4 PF16996.5 ORF92657 - 0.015 15.1 0.3 4.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 Mucin PF01456.17 ORF9178 - 7.8 6.5 18.9 8.7 6.3 18.9 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF2683 PF10884.8 ORF91169 - 0.078 13.3 0.2 0.1 12.9 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2683) DUF5535 PF17687.1 ORF90715 - 0.041 14.1 0.1 0.053 13.7 0.1 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5535) Flu_C_NS2 PF03555.14 ORF90715 - 0.094 12.9 0.7 0.11 12.7 0.2 1.5 2 0 0 2 2 2 0 Influenza C non-structural protein (NS2) SWIRM-assoc_2 PF16496.5 ORF89483 - 0.018 14.0 0.0 0.023 13.6 0.0 1.2 1 1 0 1 1 1 0 SWIRM-associated domain at the N-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks332.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks332.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks332.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks332.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:15 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Afaf PF15339.6 ORF8927 - 0.085 12.6 0.8 0.094 12.4 0.8 1.1 1 0 0 1 1 1 0 Acrosome formation-associated factor DUF4227 PF14004.6 ORF8927 - 0.3 11.1 2.4 0.49 10.4 2.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) DUF4203 PF13886.6 ORF88771 - 0.0018 18.0 0.1 0.0019 17.9 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) RSV_NS2 PF03113.14 ORF86203 - 0.058 13.4 0.3 0.072 13.1 0.3 1.2 1 1 0 1 1 1 0 Respiratory synctial virus non-structural protein NS2 Sel1 PF08238.12 ORF85926 - 7.1e-14 51.9 0.3 4.6e-06 27.1 0.0 2.1 2 0 0 2 2 2 2 Sel1 repeat TPR_6 PF13174.6 ORF85926 - 0.0049 17.4 0.2 1.3 9.8 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat Peptidase_M36 PF02128.15 ORF85917 - 0.061 12.5 0.0 0.061 12.5 0.0 1.0 1 0 0 1 1 1 0 Fungalysin metallopeptidase (M36) DUF3725 PF12523.8 ORF84204 - 0.097 13.0 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3725) Synaptobrevin PF00957.21 ORF84145 - 0.02 14.7 0.8 0.02 14.7 0.8 1.5 2 0 0 2 2 2 0 Synaptobrevin zf-Tim10_DDP PF02953.15 ORF83302 - 2.1e-05 24.1 1.3 3e-05 23.6 1.3 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Inhibitor_I69 PF13734.6 ORF83227 - 0.035 14.5 0.0 0.038 14.4 0.0 1.1 1 0 0 1 1 1 0 Spi protease inhibitor Deltaretro_Tax PF05599.11 ORF82858 - 0.17 12.4 6.2 0.21 12.1 6.2 1.1 1 0 0 1 1 1 0 Deltaretrovirus Tax protein DUF2182 PF09948.9 ORF82787 - 0.079 12.8 1.1 2.3 8.1 0.3 2.0 2 0 0 2 2 2 0 Predicted metal-binding integral membrane protein (DUF2182) Conotoxin_I2 PF17557.2 ORF82331 - 0.025 14.7 6.9 0.025 14.7 6.9 2.2 2 0 0 2 2 2 0 I2-superfamily conotoxins Glutaredoxin PF00462.24 ORF81583 - 0.0075 16.5 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin DUF3760 PF12586.8 ORF81139 - 0.17 12.1 0.3 0.26 11.5 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3760) DUF2173 PF09941.9 ORF80933 - 0.19 12.0 2.0 0.23 11.8 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2173) DUF3839 PF12943.7 ORF80542 - 0.033 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) Ldr_toxin PF13940.6 ORF80489 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system RHD_dimer PF16179.5 ORF78858 - 0.22 11.5 0.0 0.3 11.1 0.0 1.2 1 0 0 1 1 1 0 Rel homology dimerisation domain MGTL PF17059.5 ORF78172 - 0.068 13.0 0.9 0.068 13.0 0.9 2.0 2 0 0 2 2 2 0 MgtA leader peptide Ldr_toxin PF13940.6 ORF77307 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system DUF1936 PF09151.10 ORF77077 - 0.29 11.1 0.1 0.29 11.1 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) Ldr_toxin PF13940.6 ORF76563 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system DUF810 PF05664.11 ORF76402 - 0.042 12.4 0.0 0.042 12.4 0.0 1.0 1 0 0 1 1 1 0 Plant family of unknown function (DUF810) Ldr_toxin PF13940.6 ORF76386 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system DUF3760 PF12586.8 ORF76355 - 0.17 12.1 0.3 0.26 11.5 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3760) CAAD PF14159.6 ORF76345 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DNA_pol3_a_NI PF14480.6 ORF75920 - 0.1 12.6 0.5 0.23 11.5 0.8 1.4 2 0 0 2 2 2 0 DNA polymerase III polC-type N-terminus I zf-RING_UBOX PF13445.6 ORF75866 - 3.9e-11 42.8 4.5 6.3e-11 42.1 4.5 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_2 PF13639.6 ORF75866 - 8.1e-09 35.7 3.4 1.3e-08 35.1 3.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF75866 - 2.7e-08 33.5 4.0 4.5e-08 32.8 4.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF75866 - 2.1e-07 30.8 5.0 2.8e-07 30.4 5.0 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF75866 - 2.4e-06 27.3 5.1 8.9e-06 25.5 5.1 2.0 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF75866 - 1.7e-05 24.6 4.3 2.4e-05 24.1 4.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF75866 - 1.8e-05 24.8 5.1 5.6e-05 23.2 5.2 1.8 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-rbx1 PF12678.7 ORF75866 - 0.00011 22.4 2.0 0.00022 21.5 2.0 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF75866 - 0.0005 19.7 1.9 0.0005 19.7 1.9 1.7 2 0 0 2 2 2 1 RING-like zinc finger Prok-RING_4 PF14447.6 ORF75866 - 0.00085 19.1 2.7 0.001 18.9 1.7 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF75866 - 0.0019 17.9 5.0 0.0063 16.3 5.2 1.7 1 1 1 2 2 2 1 RING/Ubox like zinc-binding domain zf-RING_6 PF14835.6 ORF75866 - 0.014 15.3 0.7 0.022 14.6 0.7 1.4 1 0 0 1 1 1 0 zf-RING of BARD1-type protein FYVE PF01363.21 ORF75866 - 0.031 14.4 2.5 0.059 13.5 2.5 1.6 1 1 0 1 1 1 0 FYVE zinc finger zf-ANAPC11 PF12861.7 ORF75866 - 0.089 12.9 1.8 0.28 11.2 1.8 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger PHD PF00628.29 ORF75866 - 0.13 12.2 4.2 0.29 11.1 4.2 1.6 1 1 0 1 1 1 0 PHD-finger IBR PF01485.21 ORF75866 - 0.55 10.5 6.1 3.4 8.0 2.8 2.6 2 1 1 3 3 3 0 IBR domain, a half RING-finger domain DUF2417 PF10329.9 ORF75451 - 0.15 11.4 2.6 0.19 11.1 2.6 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF2197 PF09963.9 ORF75153 - 0.09 13.0 2.1 0.55 10.5 0.2 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) Elf1 PF05129.13 ORF74857 - 0.0054 16.7 0.0 1.2 9.2 0.0 2.1 2 0 0 2 2 2 2 Transcription elongation factor Elf1 like zinc_ribbon_4 PF13717.6 ORF74857 - 0.019 14.9 0.6 0.2 11.6 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain NinF PF05810.12 ORF74857 - 0.05 13.5 1.7 0.24 11.3 0.1 2.2 2 0 0 2 2 2 0 NinF protein XAF1_C PF18608.1 ORF74857 - 0.052 13.1 3.5 1 9.0 0.7 2.1 2 0 0 2 2 2 0 XIAP-associated factor 1 C-terminal domain zf-CHCC PF10276.9 ORF74857 - 0.066 13.3 0.1 0.066 13.3 0.1 2.7 3 0 0 3 3 3 0 Zinc-finger domain zf-ribbon_3 PF13248.6 ORF74857 - 0.073 12.5 7.1 0.34 10.4 0.0 2.7 3 0 0 3 3 3 0 zinc-ribbon domain DZR PF12773.7 ORF74857 - 0.086 12.9 4.7 0.6 10.2 4.7 2.1 1 1 0 1 1 1 0 Double zinc ribbon Zn_ribbon_recom PF13408.6 ORF74857 - 8.3 7.0 8.2 8.7 6.9 1.3 2.3 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain Bac_thur_toxin PF01338.18 ORF74692 - 0.11 11.9 3.7 0.11 11.9 3.7 1.1 1 0 0 1 1 1 0 Bacillus thuringiensis toxin AAT PF03417.16 ORF73407 - 0.064 12.9 0.2 0.074 12.7 0.2 1.0 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase DUF2273 PF10031.9 ORF7238 - 0.11 12.6 0.2 0.11 12.6 0.2 2.0 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) EVI2A PF05399.11 ORF70478 - 7.7 6.0 11.7 8.6 5.9 11.7 1.0 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) DUF2833 PF11090.8 ORF69806 - 0.18 12.2 2.6 0.52 10.7 0.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2833) DUF3177 PF11375.8 ORF69660 - 0.096 12.4 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3177) Glutaredoxin PF00462.24 ORF69510 - 0.0075 16.5 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin HlyIII PF03006.20 ORF68908 - 0.033 13.9 0.1 0.033 13.9 0.1 1.1 1 0 0 1 1 1 0 Haemolysin-III related TMEM154 PF15102.6 ORF68908 - 0.062 13.2 0.1 0.064 13.2 0.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family MPS-4 PF17523.2 ORF68686 - 0.0096 16.0 4.8 0.0096 16.0 4.8 1.6 1 1 0 1 1 1 1 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF4716 PF15837.5 ORF67819 - 1.8 8.7 9.6 0.31 11.1 4.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) Fer2_2 PF01799.20 ORF67455 - 0.16 12.0 5.8 0.22 11.6 5.8 1.3 1 0 0 1 1 1 0 [2Fe-2S] binding domain TB PF00683.17 ORF67455 - 0.17 11.7 8.3 0.22 11.3 7.3 1.8 1 1 1 2 2 2 0 TB domain DUF948 PF06103.11 ORF67233 - 0.0012 19.0 8.1 0.0014 18.8 8.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) SSP160 PF06933.11 ORF67233 - 3.7 5.6 17.6 5.1 5.2 17.6 1.3 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF4464 PF14713.6 ORF67208 - 0.26 10.8 0.0 0.28 10.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4464) zf_C2HC_14 PF18574.1 ORF66954 - 0.29 11.0 5.9 0.51 10.2 3.8 2.3 2 1 1 3 3 3 0 C2HC Zing finger domain DUF4226 PF10774.9 ORF66720 - 0.091 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4226) DUF3760 PF12586.8 ORF66651 - 0.17 12.1 0.3 0.26 11.5 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3760) META PF03724.16 ORF64488 - 4.6e-16 58.7 1.9 5.1e-16 58.6 1.9 1.0 1 0 0 1 1 1 1 META domain SR-25 PF10500.9 ORF63762 - 9.2e-05 22.2 33.3 9.6e-05 22.1 33.3 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein PCP_red PF08369.10 ORF63762 - 0.0072 16.5 0.1 0.012 15.8 0.1 1.3 1 0 0 1 1 1 1 Proto-chlorophyllide reductase 57 kD subunit CCDC106 PF15794.5 ORF63762 - 0.04 13.6 21.1 0.042 13.6 21.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 DUF3807 PF12720.7 ORF63762 - 0.17 12.2 18.4 0.18 12.1 18.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Med19 PF10278.9 ORF63762 - 0.4 10.6 26.3 0.44 10.5 26.3 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF4603 PF15376.6 ORF63762 - 0.43 7.9 16.3 0.49 7.7 16.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) RNA_pol_Rpc4 PF05132.14 ORF63762 - 1.6 9.1 16.7 1.8 9.0 16.7 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 SRP-alpha_N PF04086.13 ORF63762 - 1.7 8.5 21.4 1.7 8.5 21.4 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal GAGA_bind PF06217.12 ORF63762 - 1.8 8.7 15.9 1.7 8.8 15.9 1.0 1 0 0 1 1 1 0 GAGA binding protein-like family RNA_polI_A34 PF08208.11 ORF63762 - 2.1 8.4 33.7 2.3 8.3 33.7 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Vfa1 PF08432.10 ORF63762 - 3 8.1 23.3 3.1 8.1 23.3 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 NARP1 PF12569.8 ORF63762 - 4 6.2 18.7 4 6.2 18.7 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Presenilin PF01080.17 ORF63762 - 5 5.8 14.4 5.3 5.7 14.4 1.0 1 0 0 1 1 1 0 Presenilin Tim54 PF11711.8 ORF63762 - 5 5.8 15.3 5.3 5.7 15.3 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF4604 PF15377.6 ORF63762 - 5.3 7.4 29.3 6 7.3 29.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) SspB PF04386.13 ORF63762 - 5.3 6.9 11.0 6.3 6.7 11.0 1.1 1 0 0 1 1 1 0 Stringent starvation protein B Coilin_N PF15862.5 ORF63762 - 6.3 6.6 27.7 7.2 6.4 27.7 1.1 1 0 0 1 1 1 0 Coilin N-terminus SpoIIP PF07454.11 ORF63762 - 6.9 6.0 15.7 7.8 5.9 15.7 1.0 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) Connexin PF00029.19 ORF63762 - 7.1 6.3 13.7 7.6 6.2 13.7 1.0 1 0 0 1 1 1 0 Connexin RR_TM4-6 PF06459.12 ORF63762 - 7.9 6.2 17.6 8.1 6.2 17.6 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PPL5 PF18168.1 ORF63762 - 8.1 5.6 15.1 8.5 5.6 15.1 1.0 1 0 0 1 1 1 0 Prim-pol family 5 DUF4337 PF14235.6 ORF63762 - 8.2 6.5 14.6 8 6.5 14.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Jak1_Phl PF17887.1 ORF63762 - 9.1 6.2 14.9 12 5.9 14.9 1.3 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain DUF2182 PF09948.9 ORF63087 - 0.079 12.8 1.1 2.3 8.1 0.3 2.0 2 0 0 2 2 2 0 Predicted metal-binding integral membrane protein (DUF2182) DUF1951 PF09188.10 ORF62702 - 0.45 10.5 4.0 0.61 10.1 3.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1951) TMEM108 PF15759.5 ORF62617 - 0.079 12.0 4.8 0.086 11.8 4.8 1.0 1 0 0 1 1 1 0 TMEM108 family DUF1719 PF08224.11 ORF62603 - 0.02 14.0 0.1 0.022 13.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) DUF948 PF06103.11 ORF62483 - 0.0012 19.0 8.1 0.0014 18.8 8.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) SSP160 PF06933.11 ORF62483 - 3.7 5.6 17.6 5.1 5.2 17.6 1.3 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 APOBEC1 PF18769.1 ORF62459 - 0.065 13.5 0.5 0.08 13.2 0.5 1.2 1 0 0 1 1 1 0 APOBEC1 ATP-synt_8 PF00895.20 ORF62459 - 0.5 10.9 4.5 0.24 11.9 1.1 2.0 1 1 1 2 2 2 0 ATP synthase protein 8 Eno-Rase_NADH_b PF12242.8 ORF61769 - 0.1 12.4 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase zf-Tim10_DDP PF02953.15 ORF60653 - 2.1e-05 24.1 1.3 3e-05 23.6 1.3 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger DUF2759 PF10958.8 ORF60129 - 0.0026 17.4 1.2 0.0042 16.8 1.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2759) DUF2391 PF09622.10 ORF60129 - 0.031 13.6 0.2 0.035 13.5 0.2 1.1 1 0 0 1 1 1 0 Putative integral membrane protein (DUF2391) YabA PF06156.13 ORF59669 - 0.07 13.8 0.2 0.07 13.8 0.2 1.5 2 0 0 2 2 2 0 Initiation control protein YabA DUF4272 PF14094.6 ORF5945 - 0.19 11.0 0.0 0.19 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4272) Vitelline_membr PF10542.9 ORF5936 - 4.6 7.2 14.8 5.5 7.0 4.1 2.8 1 1 0 2 2 2 0 Vitelline membrane cysteine-rich region SHIPPO-rpt PF07004.12 ORF58745 - 0.00011 22.9 6.8 0.037 15.0 1.8 3.1 3 0 0 3 3 3 2 Sperm-tail PG-rich repeat PA_decarbox PF05870.11 ORF58543 - 0.12 12.0 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Phenolic acid decarboxylase (PAD) Rep_fac-A_C PF08646.10 ORF57298 - 0.0023 17.7 1.4 0.0028 17.4 1.4 1.1 1 0 0 1 1 1 1 Replication factor-A C terminal domain PSI PF01437.25 ORF57089 - 0.27 11.8 8.3 0.5 10.9 8.3 1.5 1 1 0 1 1 1 0 Plexin repeat EF-hand_8 PF13833.6 ORF56596 - 4.2e-14 52.1 4.0 8.4e-11 41.6 0.4 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF56596 - 1.1e-13 49.7 2.8 6.5e-06 25.3 0.2 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF56596 - 1.1e-12 48.2 1.1 1.3e-12 48.0 1.1 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF56596 - 7e-11 41.2 0.2 7.1e-06 25.6 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EFhand_Ca_insen PF08726.10 ORF56596 - 0.00016 21.7 1.5 0.00033 20.7 1.5 1.6 1 1 0 1 1 1 1 Ca2+ insensitive EF hand EF-hand_5 PF13202.6 ORF56596 - 0.00031 20.1 0.3 0.013 14.9 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_9 PF14658.6 ORF56596 - 0.00086 19.6 0.1 0.001 19.3 0.1 1.1 1 0 0 1 1 1 1 EF-hand domain Dockerin_1 PF00404.18 ORF56596 - 0.016 15.4 0.0 0.02 15.1 0.0 1.3 1 0 0 1 1 1 0 Dockerin type I domain SPARC_Ca_bdg PF10591.9 ORF56596 - 0.049 14.0 0.1 0.063 13.6 0.1 1.2 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region FAM165 PF14981.6 ORF55980 - 0.47 10.3 0.1 0.47 10.3 0.1 2.3 3 0 0 3 3 3 0 FAM165 family Gemini_AL2 PF01440.16 ORF55618 - 0.04 14.4 0.2 0.047 14.1 0.2 1.2 1 0 0 1 1 1 0 Geminivirus AL2 protein HSA PF07529.13 ORF54600 - 1.2e-08 35.1 1.1 1.5e-08 34.8 1.1 1.2 1 0 0 1 1 1 1 HSA Spec3 PF15795.5 ORF54221 - 9.9e-12 45.2 11.1 5.2e-10 39.7 11.1 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein Lustrin_cystein PF14625.6 ORF53646 - 2 8.9 12.6 9.6 6.7 6.1 2.4 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain DUF4219 PF13961.6 ORF53178 - 0.0067 16.1 0.2 0.011 15.4 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4219) DUF2745 PF10922.8 ORF52457 - 0.07 13.4 0.0 0.94 9.8 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2745) Sigma_reg_N PF13800.6 ORF52016 - 0.078 13.3 0.2 0.12 12.7 0.2 1.4 1 0 0 1 1 1 0 Sigma factor regulator N-terminal MMS1_N PF10433.9 ORF5179 - 0.031 12.9 0.0 0.031 12.9 0.0 1.0 1 0 0 1 1 1 0 Mono-functional DNA-alkylating methyl methanesulfonate N-term 4HPAD_g_N PF18671.1 ORF5179 - 0.075 12.7 2.0 0.3 10.8 1.1 2.1 2 0 0 2 2 2 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal Formyl_trans_C PF02911.18 ORF50761 - 1.5e-19 70.1 0.0 1.6e-19 70.0 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase, C-terminal domain ProQ_C PF17516.2 ORF50761 - 0.047 13.1 3.0 0.053 12.9 0.3 2.3 2 1 0 2 2 2 0 ProQ C-terminal domain FNIP PF05725.12 ORF49827 - 8e-22 77.1 8.9 4.1e-13 49.3 0.7 2.1 1 1 1 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 ORF49827 - 0.022 14.7 0.1 0.029 14.3 0.1 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) DUF2127 PF09900.9 ORF49724 - 0.011 15.9 0.2 0.015 15.5 0.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2127) RNase_PH PF01138.21 ORF49025 - 0.092 13.3 1.9 0.11 13.0 1.9 1.3 1 1 0 1 1 1 0 3' exoribonuclease family, domain 1 HTH_18 PF12833.7 ORF48756 - 3.7e-20 72.0 0.4 4.2e-20 71.8 0.4 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF48756 - 2.3e-13 49.9 0.8 2.8e-08 33.6 0.0 2.1 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family DUF3474 PF11960.8 ORF48541 - 0.011 15.9 1.1 0.013 15.7 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3474) Atg14 PF10186.9 ORF48541 - 0.1 11.7 8.6 0.11 11.5 8.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 UPF0086 PF01868.16 ORF48505 - 0.018 15.0 0.4 0.022 14.7 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function UPF0086 zf_C2HC_14 PF18574.1 ORF4844 - 0.29 11.0 5.9 0.51 10.2 3.8 2.3 2 1 1 3 3 3 0 C2HC Zing finger domain Type2_restr_D3 PF16902.5 ORF48359 - 0.017 15.0 0.4 0.017 15.0 0.4 1.5 2 0 0 2 2 2 0 Type-2 restriction enzyme D3 domain Fer4_9 PF13187.6 ORF46681 - 0.029 14.5 3.4 0.051 13.8 3.5 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF46681 - 0.15 12.2 4.7 0.29 11.3 4.7 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF46681 - 5.7 7.2 9.5 0.25 11.5 4.1 1.6 2 0 0 2 2 2 0 4Fe-4S binding domain FtsX PF02687.21 ORF46484 - 1.5 9.3 7.8 17 6.0 7.8 2.0 1 1 0 1 1 1 0 FtsX-like permease family Bac_thur_toxin PF01338.18 ORF46176 - 0.11 11.9 3.7 0.11 11.9 3.7 1.1 1 0 0 1 1 1 0 Bacillus thuringiensis toxin Ras PF00071.22 ORF45962 - 2.6e-22 79.1 0.0 2.9e-22 79.0 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF45962 - 2.1e-19 69.9 0.1 2.4e-19 69.7 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF45962 - 4.8e-08 32.7 0.0 4.8e-08 32.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF45962 - 0.0003 20.3 0.0 0.00034 20.1 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 ORF45962 - 0.0022 18.0 0.0 0.0026 17.8 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF45962 - 0.011 15.1 0.0 0.017 14.4 0.0 1.4 1 1 0 1 1 1 0 Gtr1/RagA G protein conserved region AAA_24 PF13479.6 ORF45962 - 0.014 15.1 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 ORF45962 - 0.056 12.9 0.0 0.065 12.6 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein PduV-EutP PF10662.9 ORF45962 - 0.063 13.0 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation GTP_EFTU PF00009.27 ORF45962 - 0.13 11.8 0.0 10 5.6 0.0 2.0 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain Fzo_mitofusin PF04799.13 ORF44666 - 0.0033 17.0 3.1 0.005 16.4 3.1 1.3 1 0 0 1 1 1 1 fzo-like conserved region ATPase PF06745.13 ORF44666 - 0.14 11.5 0.7 0.15 11.4 0.7 1.1 1 0 0 1 1 1 0 KaiC Herpes_gE PF02480.16 ORF44413 - 0.059 12.1 0.2 0.073 11.8 0.2 1.0 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E Defensin_5 PF18251.1 ORF43685 - 0.02 15.0 0.1 0.029 14.5 0.1 1.3 1 0 0 1 1 1 0 Fungal defensin Copsin ColG_sub PF18496.1 ORF43640 - 0.00086 19.4 0.7 0.001 19.2 0.7 1.1 1 0 0 1 1 1 1 Collagenase G catalytic helper subdomain HlyIII PF03006.20 ORF42717 - 0.033 13.9 0.1 0.033 13.9 0.1 1.1 1 0 0 1 1 1 0 Haemolysin-III related TMEM154 PF15102.6 ORF42717 - 0.062 13.2 0.1 0.064 13.2 0.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family EF_TS PF00889.19 ORF42486 - 0.068 12.8 0.0 0.071 12.7 0.0 1.0 1 0 0 1 1 1 0 Elongation factor TS DUF3343 PF11823.8 ORF42486 - 0.089 12.3 0.5 0.23 11.0 0.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3343) Ribosomal_L14e PF01929.17 ORF41514 - 4.2e-26 91.3 6.4 4.2e-26 91.3 6.4 1.9 1 1 1 2 2 2 2 Ribosomal protein L14 Corona_6B_7B PF03262.13 ORF41476 - 0.13 11.7 0.6 0.17 11.3 0.6 1.3 1 1 0 1 1 1 0 Coronavirus 6B/7B protein Thioredoxin PF00085.20 ORF41203 - 0.0053 16.7 0.0 0.0063 16.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin NCD3G PF07562.14 ORF40781 - 0.016 15.2 2.6 1 9.4 0.2 2.2 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR DUF2892 PF11127.8 ORF39522 - 0.036 14.1 0.9 0.036 14.1 0.9 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) Fer2_4 PF13510.6 ORF38865 - 0.16 12.0 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain EF-hand_1 PF00036.32 ORF38359 - 7.2e-05 22.1 0.0 0.00011 21.5 0.0 1.2 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF38359 - 0.0007 19.3 0.0 0.0011 18.8 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF38359 - 0.0028 17.1 0.2 0.004 16.6 0.2 1.2 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF38359 - 0.0099 16.3 0.0 0.011 16.2 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF38359 - 0.021 14.7 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair UPF0014 PF03649.13 ORF37785 - 0.0033 16.8 0.5 0.0036 16.7 0.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) Claudin_3 PF06653.11 ORF37785 - 0.034 14.1 3.5 0.039 13.9 3.5 1.1 1 0 0 1 1 1 0 Tight junction protein, Claudin-like LAX PF15681.5 ORF37785 - 0.19 10.5 0.4 0.22 10.3 0.4 1.1 1 0 0 1 1 1 0 Lymphocyte activation family X DUF2207 PF09972.9 ORF37785 - 0.29 9.8 2.2 0.3 9.8 2.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Bunya_G2 PF03563.13 ORF37484 - 0.12 11.7 1.0 0.12 11.6 1.0 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 IML1 PF12257.8 ORF37284 - 0.048 12.8 1.1 0.049 12.7 1.1 1.0 1 0 0 1 1 1 0 Vacuolar membrane-associated protein Iml1 MraZ PF02381.18 ORF37284 - 0.1 12.6 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like SUZ PF12752.7 ORF36968 - 0.11 13.2 2.0 0.32 11.8 0.3 2.0 2 0 0 2 2 2 0 SUZ domain Glycos_transf_4 PF00953.21 ORF36896 - 0.014 15.4 0.1 0.023 14.7 0.1 1.5 1 1 0 1 1 1 0 Glycosyl transferase family 4 Transmemb_17 PF09799.9 ORF36689 - 0.12 13.0 8.5 0.14 12.8 8.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein Peptidase_C1 PF00112.23 ORF36686 - 8e-23 81.7 0.1 8.6e-23 81.6 0.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF36686 - 3.3e-06 26.2 0.0 3.6e-06 26.0 0.0 1.0 1 0 0 1 1 1 1 Peptidase C1-like family EF-hand_1 PF00036.32 ORF3667 - 3.9e-11 41.7 0.3 1.2e-06 27.6 0.1 2.2 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF3667 - 1.5e-07 30.8 0.0 2e-06 27.3 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF3667 - 1.4e-06 28.7 0.0 0.0018 18.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF3667 - 8.1e-06 25.1 0.1 1.3e-05 24.4 0.1 1.4 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF3667 - 0.00075 19.3 0.3 0.015 15.2 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_4 PF12763.7 ORF3667 - 0.0025 17.7 0.1 0.57 10.2 0.0 2.0 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand tRNA_synt_1c_R1 PF04558.15 ORF3667 - 0.013 15.5 0.0 0.015 15.3 0.0 1.1 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 EF-hand_9 PF14658.6 ORF3667 - 0.04 14.2 0.0 7.7 6.9 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain PP1 PF07430.11 ORF36512 - 0.063 13.3 0.2 0.096 12.8 0.1 1.3 1 1 0 1 1 1 0 Phloem filament protein PP1 cystatin-like domain DUF2318 PF10080.9 ORF35827 - 0.093 12.9 0.0 0.094 12.8 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) Bac_thur_toxin PF01338.18 ORF35801 - 0.11 11.9 3.7 0.11 11.9 3.7 1.1 1 0 0 1 1 1 0 Bacillus thuringiensis toxin Pox_T4_N PF04491.12 ORF35749 - 0.14 12.0 2.1 0.53 10.2 0.2 2.1 2 0 0 2 2 2 0 Poxvirus T4 protein, N terminus CDC37_C PF08564.10 ORF34801 - 0.097 12.8 0.2 0.11 12.6 0.2 1.1 1 0 0 1 1 1 0 Cdc37 C terminal domain Dehydratase_MU PF02288.15 ORF34687 - 0.078 12.9 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 Dehydratase medium subunit BatA PF07584.11 ORF33601 - 0.018 15.4 0.3 0.026 14.9 0.2 1.3 1 1 0 1 1 1 0 Aerotolerance regulator N-terminal ParcG PF10274.9 ORF33601 - 0.069 13.3 0.2 0.077 13.1 0.2 1.0 1 0 0 1 1 1 0 Parkin co-regulated protein DUF2635 PF10948.8 ORF33601 - 0.15 11.8 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2635) IGF2_C PF08365.11 ORF33569 - 0.083 12.9 3.3 0.09 12.8 2.5 1.5 1 1 0 1 1 1 0 Insulin-like growth factor II E-peptide Pap_E4 PF02711.14 ORF33569 - 0.27 12.2 7.9 0.3 12.1 7.9 1.3 1 1 0 1 1 1 0 E4 protein Gemin6 PF06372.12 ORF33484 - 0.014 15.0 0.0 0.017 14.6 0.0 1.1 1 0 0 1 1 1 0 Gemin6 protein DUF2946 PF11162.8 ORF3240 - 0.082 13.6 1.8 0.076 13.7 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) Ephrin_rec_like PF07699.13 ORF32190 - 0.064 13.0 16.5 1.1 9.1 8.8 3.0 1 1 2 3 3 3 0 Putative ephrin-receptor like TNFR_c6 PF00020.18 ORF32190 - 0.066 13.6 8.0 1.5 9.2 4.0 2.5 2 1 0 2 2 2 0 TNFR/NGFR cysteine-rich region CBM_14 PF01607.24 ORF32190 - 1 9.6 8.0 62 3.9 8.0 2.4 1 1 0 1 1 1 0 Chitin binding Peritrophin-A domain Opy2 PF09463.10 ORF32190 - 7.3 7.0 15.0 1.1 9.6 6.2 2.5 2 1 1 3 3 3 0 Opy2 protein zf-C2H2 PF00096.26 ORF31886 - 2.8e-11 43.2 8.7 1e-06 28.9 2.6 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF31886 - 2.4e-07 31.0 7.5 0.00031 21.3 2.0 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF31886 - 0.00028 21.2 0.7 0.00028 21.2 0.7 3.2 3 0 0 3 3 3 1 Zinc-finger double domain zf-met PF12874.7 ORF31886 - 0.00045 20.5 7.7 0.0025 18.2 1.9 2.7 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_aberr PF17017.5 ORF31886 - 0.024 14.8 0.4 0.024 14.8 0.4 2.0 1 1 1 2 2 2 0 Aberrant zinc-finger zf-C2H2_6 PF13912.6 ORF31886 - 0.03 14.3 6.9 0.14 12.2 2.7 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2HE PF16278.5 ORF31886 - 0.03 14.8 2.0 0.03 14.8 2.0 1.7 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_11 PF16622.5 ORF31886 - 0.037 13.8 2.8 0.037 13.8 2.8 1.6 2 0 0 2 2 2 0 zinc-finger C2H2-type FOXP-CC PF16159.5 ORF31886 - 0.038 14.6 4.5 0.16 12.6 4.4 1.9 1 1 1 2 2 2 0 FOXP coiled-coil domain zf-C2HC_2 PF13913.6 ORF31886 - 0.12 12.3 0.2 0.12 12.3 0.2 2.9 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-BED PF02892.15 ORF31886 - 0.21 11.6 7.5 3 7.9 3.3 2.3 1 1 1 2 2 2 0 BED zinc finger zf-LYAR PF08790.11 ORF31886 - 0.43 10.5 3.8 4.7 7.2 0.6 2.3 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger zf-C2H2_2 PF12756.7 ORF31886 - 0.74 10.2 7.1 1.2 9.5 4.0 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) ODV-E18 PF10717.9 ORF3153 - 1.4 8.8 3.6 2 8.3 0.2 2.0 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Baculo_11_kDa PF06143.11 ORF3153 - 8 6.1 12.6 0.16 11.6 5.4 1.8 1 1 1 2 2 2 0 Baculovirus 11 kDa family DUF2992 PF11208.8 ORF30326 - 0.68 10.2 8.6 0.77 10.0 8.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) SHP PF03579.13 ORF30171 - 0.087 12.8 0.0 3 7.9 0.0 2.2 2 0 0 2 2 2 0 Small hydrophobic protein HupF_HypC PF01455.18 ORF30064 - 0.065 13.4 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 HupF/HypC family Chromosome_seg PF13889.6 ORF29681 - 0.082 13.1 0.1 0.089 13.0 0.1 1.2 1 0 0 1 1 1 0 Chromosome segregation during meiosis DUF5363 PF17320.2 ORF29649 - 0.28 11.1 4.2 0.32 10.9 0.3 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5363) SERTA PF06031.13 ORF29361 - 0.033 13.9 0.5 0.079 12.6 0.5 1.7 1 0 0 1 1 1 0 SERTA motif DDE_Tnp_1_7 PF13843.6 ORF28712 - 0.013 14.8 0.1 0.014 14.7 0.1 1.0 1 0 0 1 1 1 0 Transposase IS4 CAAD PF14159.6 ORF27944 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DUF3760 PF12586.8 ORF27900 - 0.17 12.1 0.3 0.26 11.5 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3760) TFIID_20kDa PF03847.13 ORF27163 - 5.7e-13 49.2 0.2 6.4e-13 49.0 0.2 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Histone PF00125.24 ORF27163 - 0.00021 21.7 0.0 0.00023 21.5 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 MCM_lid PF17855.1 ORF27163 - 0.0027 18.1 0.1 0.0039 17.6 0.1 1.3 1 1 0 1 1 1 1 MCM AAA-lid domain TFIID-31kDa PF02291.15 ORF27163 - 0.039 14.0 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Orthoreo_P17 PF07272.11 ORF27163 - 0.081 12.9 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Orthoreovirus P17 protein TFIID-18kDa PF02269.16 ORF27163 - 0.1 12.7 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit DUF2101 PF09874.9 ORF26808 - 3.8 7.2 7.0 4.5 6.9 7.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) TMEM208_SND2 PF05620.11 ORF26808 - 5.4 6.8 5.8 7.2 6.4 5.8 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 Ribosomal_L4 PF00573.22 ORF25666 - 1.8 8.2 5.7 2.2 7.9 5.7 1.1 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family Flavi_glycop_C PF02832.16 ORF25119 - 0.012 15.7 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Flavivirus glycoprotein, immunoglobulin-like domain DUF1430 PF07242.11 ORF24643 - 0.029 14.6 0.2 0.033 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) MPS-4 PF17523.2 ORF23196 - 0.038 14.1 4.1 0.046 13.8 4.1 1.3 1 1 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF4393 PF14337.6 ORF22454 - 0.042 13.7 3.1 0.048 13.5 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4393) DNA_RNApol_7kD PF03604.13 ORF22246 - 2.2 8.1 7.4 3.4 7.4 2.0 2.4 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit HCV_capsid PF01543.17 ORF22162 - 0.014 15.6 2.6 0.017 15.3 2.6 1.1 1 0 0 1 1 1 0 Hepatitis C virus capsid protein TFIID_20kDa PF03847.13 ORF21036 - 5.7e-13 49.2 0.2 6.4e-13 49.0 0.2 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Histone PF00125.24 ORF21036 - 0.00021 21.7 0.0 0.00023 21.5 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 MCM_lid PF17855.1 ORF21036 - 0.0027 18.1 0.1 0.0039 17.6 0.1 1.3 1 1 0 1 1 1 1 MCM AAA-lid domain TFIID-31kDa PF02291.15 ORF21036 - 0.039 14.0 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Orthoreo_P17 PF07272.11 ORF21036 - 0.081 12.9 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Orthoreovirus P17 protein TFIID-18kDa PF02269.16 ORF21036 - 0.1 12.7 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit NiFe_hyd_SSU_C PF14720.6 ORF20613 - 1.1 9.7 10.7 2.2 8.7 10.2 1.8 1 1 0 1 1 1 0 NiFe/NiFeSe hydrogenase small subunit C-terminal Fer4_5 PF12801.7 ORF20409 - 0.11 12.5 3.2 0.35 10.9 3.2 1.8 1 1 0 1 1 1 0 4Fe-4S binding domain Asp4 PF16996.5 ORF2018 - 0.015 15.1 0.3 4.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 O_Spanin_T7 PF17531.2 ORF201 - 0.1 12.6 3.1 2.6 8.2 0.1 2.8 3 0 0 3 3 3 0 outer-membrane spanin sub-unit LZ_Tnp_IS481 PF13011.6 ORF19084 - 0.032 14.7 2.1 0.046 14.3 2.1 1.3 1 1 0 1 1 1 0 leucine-zipper of insertion element IS481 Glucos_trans_II PF14264.6 ORF19083 - 0.54 9.6 9.3 0.56 9.5 9.3 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII CAAD PF14159.6 ORF18958 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Spec3 PF15795.5 ORF18372 - 1e-11 45.2 11.1 5.2e-10 39.7 11.1 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein DUF3736 PF12540.8 ORF18256 - 1.4e-05 25.2 0.4 1.5e-05 25.1 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3736) Asp4 PF16996.5 ORF18188 - 0.015 15.1 0.3 4.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 Ldr_toxin PF13940.6 ORF18099 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system Alpha_GJ PF03229.13 ORF17754 - 0.004 17.7 0.9 0.0049 17.4 0.9 1.2 1 0 0 1 1 1 1 Alphavirus glycoprotein J Ku_PK_bind PF08785.11 ORF171 - 0.14 12.3 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Ku C terminal domain like TFIID_20kDa PF03847.13 ORF16847 - 5.7e-13 49.2 0.2 6.4e-13 49.0 0.2 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Histone PF00125.24 ORF16847 - 0.00021 21.7 0.0 0.00023 21.5 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 MCM_lid PF17855.1 ORF16847 - 0.0027 18.1 0.1 0.0039 17.6 0.1 1.3 1 1 0 1 1 1 1 MCM AAA-lid domain TFIID-31kDa PF02291.15 ORF16847 - 0.039 14.0 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Orthoreo_P17 PF07272.11 ORF16847 - 0.081 12.9 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Orthoreovirus P17 protein TFIID-18kDa PF02269.16 ORF16847 - 0.1 12.7 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit Asp4 PF16996.5 ORF1673 - 0.015 15.1 0.3 4.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 Neil1-DNA_bind PF09292.10 ORF16375 - 0.077 13.0 1.8 0.077 13.0 1.8 2.3 2 1 2 4 4 4 0 Endonuclease VIII-like 1, DNA bind PNPase_C PF12111.8 ORF15320 - 0.057 12.9 0.1 0.08 12.4 0.1 1.2 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal CAAD PF14159.6 ORF15286 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase NCE101 PF11654.8 ORF151477 - 0.18 11.5 1.7 0.63 9.8 1.7 1.9 1 1 0 1 1 1 0 Non-classical export protein 1 DUF4490 PF14892.6 ORF151265 - 2.9e-07 30.5 0.9 5.7e-07 29.5 0.9 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4490) DUF5394 PF17372.2 ORF151265 - 0.024 14.2 0.2 0.028 14.0 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5394) PTPA PF03095.15 ORF151100 - 6.1e-27 94.9 0.1 6.8e-27 94.7 0.1 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein Stig1 PF04885.13 ORF151089 - 0.59 10.6 13.3 0.9 10.0 13.3 1.5 1 1 0 1 1 1 0 Stigma-specific protein, Stig1 zf-CCHC_2 PF13696.6 ORF150882 - 0.11 12.3 3.0 0.22 11.4 0.8 2.3 2 0 0 2 2 2 0 Zinc knuckle DctQ PF04290.12 ORF150882 - 0.17 11.8 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component CPDase PF07823.11 ORF150730 - 0.0072 16.0 0.0 0.0076 16.0 0.0 1.0 1 0 0 1 1 1 1 Cyclic phosphodiesterase-like protein Ldr_toxin PF13940.6 ORF150365 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system OCRE PF17780.1 ORF150336 - 0.041 13.9 0.1 0.068 13.2 0.1 1.4 1 0 0 1 1 1 0 OCRE domain Pkinase PF00069.25 ORF149770 - 5.5e-14 52.2 0.6 6e-14 52.0 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF149770 - 1.1e-08 34.7 0.2 1.2e-08 34.6 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase HGTP_anticodon PF03129.20 ORF149348 - 9.8e-14 51.3 0.0 1.1e-13 51.1 0.0 1.1 1 0 0 1 1 1 1 Anticodon binding domain Fer4_4 PF12800.7 ORF149343 - 1.1 9.9 8.1 2.7 8.7 1.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 ORF149343 - 4.8 7.5 12.9 7.3 6.9 1.9 2.2 1 1 1 2 2 2 0 4Fe-4S binding domain Peptidase_C16 PF01831.17 ORF148582 - 0.047 13.4 0.1 0.05 13.4 0.1 1.0 1 0 0 1 1 1 0 Peptidase C16 family DUF2188 PF09954.9 ORF147924 - 0.0058 16.8 5.7 1.3 9.3 2.8 2.5 2 1 0 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2188) AP2 PF00847.20 ORF147924 - 0.022 15.0 2.6 0.022 15.0 2.6 1.6 2 0 0 2 2 2 0 AP2 domain SPOR PF05036.13 ORF147924 - 0.065 13.6 4.6 0.086 13.2 0.3 2.1 1 1 1 2 2 2 0 Sporulation related domain DUF3721 PF12518.8 ORF147924 - 0.21 11.5 2.9 0.53 10.2 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function Arm-DNA-bind_4 PF14657.6 ORF147924 - 0.9 9.3 10.5 4.7 7.1 2.8 2.6 2 1 0 2 2 2 0 Arm DNA-binding domain SLATT_4 PF18186.1 ORF147709 - 0.22 11.1 0.6 0.24 11.0 0.6 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 Ldr_toxin PF13940.6 ORF147156 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system Synaptobrevin PF00957.21 ORF147133 - 0.02 14.7 0.8 0.02 14.7 0.8 1.5 2 0 0 2 2 2 0 Synaptobrevin Fzo_mitofusin PF04799.13 ORF147119 - 0.0033 17.0 3.1 0.005 16.4 3.1 1.3 1 0 0 1 1 1 1 fzo-like conserved region ATPase PF06745.13 ORF147119 - 0.14 11.5 0.7 0.15 11.4 0.7 1.1 1 0 0 1 1 1 0 KaiC ATG27 PF09451.10 ORF147102 - 8.3 6.2 6.7 8.5 6.1 6.7 1.2 1 0 0 1 1 1 0 Autophagy-related protein 27 SipA_VBS PF17985.1 ORF14668 - 0.28 11.1 2.0 17 5.5 0.6 2.7 2 1 0 2 2 2 0 SipA vinculin binding site RFamide_26RFa PF11109.8 ORF144959 - 0.16 12.5 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 Orexigenic neuropeptide Qrfp/P518 DUF5363 PF17320.2 ORF144427 - 0.28 11.1 4.2 0.32 10.9 0.3 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5363) zf-MYST PF17772.1 ORF144324 - 0.025 14.2 5.0 0.33 10.6 0.2 2.5 2 1 0 2 2 2 0 MYST family zinc finger domain HAP2-GCS1 PF10699.9 ORF143536 - 0.14 12.1 1.4 1 9.4 0.1 2.3 2 0 0 2 2 2 0 Male gamete fusion factor AgrB PF04647.15 ORF143390 - 0.071 12.4 4.1 0.079 12.3 4.1 1.0 1 0 0 1 1 1 0 Accessory gene regulator B CCDC23 PF15674.5 ORF143379 - 0.055 13.5 0.1 0.077 13.0 0.1 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 23 DBD_Tnp_Mut PF03108.15 ORF14250 - 0.1 12.6 0.8 0.16 12.0 0.8 1.4 1 0 0 1 1 1 0 MuDR family transposase SMC_N PF02463.19 ORF142252 - 0.0009 18.7 0.5 0.0011 18.5 0.5 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Spec3 PF15795.5 ORF141924 - 1e-14 54.8 21.6 1.1e-12 48.2 21.6 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein DUF997 PF06196.12 ORF141924 - 1.1 9.3 10.7 2.5 8.2 10.7 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF997) TM2 PF05154.16 ORF141924 - 5.3 7.4 14.3 12 6.3 0.7 2.2 2 0 0 2 2 2 0 TM2 domain Asp4 PF16996.5 ORF141783 - 0.015 15.1 0.3 4.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 Spec3 PF15795.5 ORF141683 - 1.1e-14 54.7 21.0 1.3e-12 48.0 21.0 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein DUF997 PF06196.12 ORF141683 - 2.5 8.2 10.8 5.9 7.0 10.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF997) DUF1201 PF06716.11 ORF141683 - 3.1 7.9 5.6 0.35 10.9 1.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1201) DUF3839 PF12943.7 ORF141459 - 0.033 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) SIKE PF05769.11 ORF141432 - 0.00026 21.0 2.5 0.00031 20.7 2.5 1.1 1 0 0 1 1 1 1 SIKE family YabA PF06156.13 ORF141432 - 0.014 16.0 1.4 0.016 15.8 1.4 1.1 1 0 0 1 1 1 0 Initiation control protein YabA Chordopox_A15 PF05846.12 ORF141432 - 0.061 13.5 0.3 0.067 13.4 0.3 1.1 1 0 0 1 1 1 0 Chordopoxvirus A15 protein APC_N_CC PF16689.5 ORF141432 - 4.2 7.5 8.1 11 6.2 5.9 2.4 1 1 1 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain WW_FCH_linker PF16623.5 ORF140430 - 0.0054 17.5 0.7 0.0077 17.0 0.2 1.6 1 1 1 2 2 2 1 Unstructured linker region between on GAS7 protein ThrE PF06738.12 ORF140193 - 0.086 12.2 0.0 0.1 12.0 0.0 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter Cation_ATPase PF13246.6 ORF139773 - 0.081 13.0 0.4 0.12 12.4 0.4 1.2 1 0 0 1 1 1 0 Cation transport ATPase (P-type) DUF4219 PF13961.6 ORF137397 - 0.0067 16.1 0.2 0.011 15.4 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4219) Herpes_glycop_H PF02489.16 ORF137199 - 0.0094 14.5 0.4 0.0099 14.4 0.4 1.0 1 0 0 1 1 1 1 Herpesvirus glycoprotein H main domain HECW1_helix PF18436.1 ORF137199 - 0.073 13.2 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 PGPGW PF09656.10 ORF137196 - 0.12 11.9 0.3 5.2 6.7 0.1 2.3 2 0 0 2 2 2 0 Putative transmembrane protein (PGPGW) DUF2139 PF09910.9 ORF13650 - 0.15 11.2 0.8 0.14 11.3 0.8 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2139) MTCP1 PF08991.10 ORF136299 - 1.8 8.9 10.4 8.4 6.7 5.0 2.2 1 1 1 2 2 2 0 Mature-T-Cell Proliferation I type Hydrolase_3 PF08282.12 ORF135846 - 1.9e-08 34.4 0.4 2.3e-08 34.1 0.4 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Limkain-b1 PF11608.8 ORF135315 - 0.064 13.3 0.0 0.1 12.7 0.0 1.4 1 1 0 1 1 1 0 Limkain b1 CLIP1_ZNF PF16641.5 ORF135315 - 0.11 12.4 0.1 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 CLIP1 zinc knuckle SpdB PF05122.13 ORF13455 - 0.033 14.3 0.0 0.051 13.7 0.0 1.4 1 0 0 1 1 1 0 Mobile element transfer protein Peptidase_M36 PF02128.15 ORF134007 - 0.061 12.5 0.0 0.061 12.5 0.0 1.0 1 0 0 1 1 1 0 Fungalysin metallopeptidase (M36) IIGP PF05049.13 ORF133984 - 0.0089 15.1 0.1 0.0089 15.1 0.1 1.0 1 0 0 1 1 1 1 Interferon-inducible GTPase (IIGP) FidL_like PF15941.5 ORF133984 - 0.031 14.7 0.4 0.035 14.5 0.4 1.1 1 0 0 1 1 1 0 FidL-like putative membrane protein DUF2417 PF10329.9 ORF133583 - 0.15 11.4 2.6 0.19 11.1 2.6 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Tombus_P19 PF03220.13 ORF133548 - 0.083 12.6 0.0 0.089 12.5 0.0 1.1 1 0 0 1 1 1 0 Tombusvirus P19 core protein zf-RING-like PF08746.11 ORF133548 - 0.089 13.1 1.9 0.16 12.3 1.8 1.4 1 1 0 1 1 1 0 RING-like domain Chromo_shadow PF01393.19 ORF132534 - 0.069 13.3 1.2 0.1 12.7 1.2 1.5 1 1 0 1 1 1 0 Chromo shadow domain Cation_ATPase_N PF00690.26 ORF132337 - 0.0002 21.0 0.2 0.00029 20.4 0.2 1.2 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus DUF5598 PF18127.1 ORF132337 - 0.13 12.7 0.0 0.14 12.6 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5598) UPF0220 PF05255.11 ORF132283 - 0.015 14.9 1.6 0.019 14.5 1.5 1.2 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0220) Ole-e-6 PF09253.10 ORF132265 - 0.21 11.6 5.9 0.34 10.9 5.9 1.3 1 0 0 1 1 1 0 Pollen allergen ole e 6 Ras PF00071.22 ORF131555 - 2.6e-22 79.1 0.0 2.9e-22 79.0 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF131555 - 2.1e-19 69.9 0.1 2.4e-19 69.7 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF131555 - 4.8e-08 32.7 0.0 4.8e-08 32.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF131555 - 0.0003 20.3 0.0 0.00034 20.1 0.0 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 ORF131555 - 0.0022 18.0 0.0 0.0026 17.8 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF131555 - 0.011 15.1 0.0 0.017 14.4 0.0 1.4 1 1 0 1 1 1 0 Gtr1/RagA G protein conserved region AAA_24 PF13479.6 ORF131555 - 0.014 15.1 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 ORF131555 - 0.056 12.9 0.0 0.065 12.6 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein PduV-EutP PF10662.9 ORF131555 - 0.063 13.0 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation GTP_EFTU PF00009.27 ORF131555 - 0.13 11.8 0.0 10 5.6 0.0 2.0 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain DUF1199 PF06712.11 ORF131536 - 0.041 13.9 0.2 0.066 13.3 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1199) Spec3 PF15795.5 ORF13123 - 3.9e-14 52.9 19.0 7.3e-12 45.7 19.0 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein DUF1201 PF06716.11 ORF13123 - 0.076 13.0 1.2 0.076 13.0 1.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1201) DUF1072 PF06380.11 ORF13123 - 0.58 10.1 3.4 0.38 10.7 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) Peptidase_M36 PF02128.15 ORF130404 - 0.061 12.5 0.0 0.061 12.5 0.0 1.0 1 0 0 1 1 1 0 Fungalysin metallopeptidase (M36) CAAD PF14159.6 ORF129949 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Limkain-b1 PF11608.8 ORF12919 - 0.064 13.3 0.0 0.1 12.7 0.0 1.4 1 1 0 1 1 1 0 Limkain b1 CLIP1_ZNF PF16641.5 ORF12919 - 0.11 12.4 0.1 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 CLIP1 zinc knuckle Sin3_corepress PF08295.12 ORF128613 - 0.023 14.7 0.2 0.033 14.3 0.2 1.3 1 0 0 1 1 1 0 Sin3 family co-repressor GTP-bdg_M PF16360.5 ORF128613 - 0.03 14.9 0.9 0.04 14.5 0.9 1.1 1 0 0 1 1 1 0 GTP-binding GTPase Middle Region DUF5500 PF17604.2 ORF127877 - 0.087 12.9 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5500) DUF3839 PF12943.7 ORF127674 - 0.033 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks333.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks333.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks333.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks333.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Synaptobrevin PF00957.21 ORF127459 - 0.02 14.7 0.8 0.02 14.7 0.8 1.5 2 0 0 2 2 2 0 Synaptobrevin PilI PF10623.9 ORF127447 - 0.56 10.4 4.7 0.23 11.6 2.4 1.4 1 1 0 1 1 1 0 Plasmid conjugative transfer protein PilI PLDc_3 PF13918.6 ORF126011 - 0.14 11.8 0.1 0.17 11.5 0.1 1.1 1 0 0 1 1 1 0 PLD-like domain Asp4 PF16996.5 ORF125864 - 0.015 15.1 0.3 4.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 Tub PF01167.18 ORF125234 - 2.4e-29 102.8 0.1 2.6e-29 102.7 0.1 1.0 1 0 0 1 1 1 1 Tub family RRS1 PF04939.12 ORF125234 - 0.069 13.0 0.4 0.076 12.9 0.4 1.1 1 0 0 1 1 1 0 Ribosome biogenesis regulatory protein (RRS1) Sec23_helical PF04815.15 ORF125080 - 0.087 12.7 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Sec23/Sec24 helical domain Ribosomal_S12 PF17487.2 ORF124673 - 0.1 13.4 1.7 0.13 13.1 1.7 1.2 1 0 0 1 1 1 0 Ribosomal protein S12 FtsX PF02687.21 ORF124553 - 1.5 9.3 7.8 17 6.0 7.8 2.0 1 1 0 1 1 1 0 FtsX-like permease family zf-RING_13 PF17977.1 ORF124328 - 0.37 10.9 6.6 5.6 7.2 0.6 2.2 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain Cation_ATPase PF13246.6 ORF123517 - 0.081 13.0 0.4 0.12 12.4 0.4 1.2 1 0 0 1 1 1 0 Cation transport ATPase (P-type) Pkinase PF00069.25 ORF123465 - 5.5e-14 52.2 0.6 6e-14 52.0 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF123465 - 1.1e-08 34.7 0.2 1.2e-08 34.6 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Spec3 PF15795.5 ORF123219 - 3.9e-14 52.9 19.0 7.3e-12 45.7 19.0 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein DUF1201 PF06716.11 ORF123219 - 0.076 13.0 1.2 0.076 13.0 1.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1201) DUF1072 PF06380.11 ORF123219 - 0.58 10.1 3.4 0.38 10.7 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) Tmemb_55A PF09788.9 ORF122231 - 0.069 12.2 0.2 0.11 11.6 0.2 1.3 1 1 0 1 1 1 0 Transmembrane protein 55A Ldr_toxin PF13940.6 ORF122116 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system zf-CSL PF05207.13 ORF121571 - 1.5e-17 63.0 0.4 2e-17 62.7 0.4 1.2 1 0 0 1 1 1 1 CSL zinc finger Ldr_toxin PF13940.6 ORF121433 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system Mannosyl_trans PF05007.13 ORF121118 - 0.013 15.4 2.6 0.016 15.1 2.6 1.0 1 0 0 1 1 1 0 Mannosyltransferase (PIG-M) CTXphi_pIII-N1 PF16710.5 ORF12076 - 0.15 12.2 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII P19Arf_N PF07392.12 ORF120407 - 0.048 14.1 0.8 0.092 13.2 0.3 1.7 1 1 0 1 1 1 0 Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus zf-dskA_traR PF01258.17 ORF120407 - 0.055 13.4 0.5 0.095 12.7 0.5 1.4 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger Ldr_toxin PF13940.6 ORF120154 - 0.055 13.5 1.1 0.1 12.7 0.2 1.8 1 1 1 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system HlyIII PF03006.20 ORF119750 - 0.033 13.9 0.1 0.033 13.9 0.1 1.1 1 0 0 1 1 1 0 Haemolysin-III related TMEM154 PF15102.6 ORF119750 - 0.062 13.2 0.1 0.064 13.2 0.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family McyA_C PF12593.8 ORF119339 - 0.16 11.8 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 Microcystin synthetase C terminal Melittin PF01372.17 ORF1191 - 0.0025 17.6 0.0 0.033 14.1 0.0 2.4 2 0 0 2 2 2 1 Melittin Asp4 PF16996.5 ORF118974 - 0.015 15.1 0.3 4.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 Pkinase PF00069.25 ORF118423 - 0.0019 17.6 0.0 0.0024 17.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF2777 PF10949.8 ORF118423 - 0.016 14.9 0.2 0.017 14.8 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) Lact-deh-memb PF09330.11 ORF117150 - 1.7e-41 142.4 0.3 1.9e-41 142.3 0.3 1.0 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding Bac_RepA_C PF18008.1 ORF116740 - 0.13 12.7 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Replication initiator protein A C-terminal domain Asp4 PF16996.5 ORF116615 - 0.015 15.1 0.3 4.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 US22 PF02393.16 ORF115871 - 0.15 12.3 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 US22 like Ins145_P3_rec PF08709.11 ORF115831 - 1.4e-11 44.0 0.0 1.4e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Inositol 1,4,5-trisphosphate/ryanodine receptor DUF4754 PF15946.5 ORF115406 - 0.094 13.0 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4754) DUF3094 PF11293.8 ORF114795 - 0.29 10.9 3.8 0.45 10.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) CrgA PF06781.12 ORF114795 - 5.4 7.2 6.5 2 8.6 0.2 2.0 1 1 1 2 2 2 0 Cell division protein CrgA ObR_Ig PF18589.1 ORF114599 - 0.0011 19.4 0.5 0.0013 19.1 0.5 1.1 1 0 0 1 1 1 1 Obesity receptor immunoglobulin like domain INCENP_N PF12178.8 ORF114230 - 0.15 12.1 0.7 0.67 10.0 0.2 2.0 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal Myticin-prepro PF10690.9 ORF113003 - 0.63 10.3 6.9 0.68 10.2 6.9 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Urb2 PF10441.9 ORF112116 - 0.051 13.5 0.7 0.06 13.3 0.7 1.0 1 0 0 1 1 1 0 Urb2/Npa2 family DUF5510 PF17629.2 ORF11185 - 0.1 12.5 2.1 0.2 11.6 2.1 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5510) DUF1922 PF09082.10 ORF111338 - 0.11 12.8 0.4 0.15 12.3 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1922) zf_C2HC_14 PF18574.1 ORF110554 - 0.29 11.0 5.9 0.51 10.2 3.8 2.3 2 1 1 3 3 3 0 C2HC Zing finger domain DUF2417 PF10329.9 ORF109593 - 0.15 11.4 2.6 0.19 11.1 2.6 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) PsaD PF02531.16 ORF109115 - 0.19 11.2 0.0 0.22 11.1 0.0 1.0 1 0 0 1 1 1 0 PsaD Limkain-b1 PF11608.8 ORF107571 - 0.064 13.3 0.0 0.1 12.7 0.0 1.4 1 1 0 1 1 1 0 Limkain b1 CLIP1_ZNF PF16641.5 ORF107571 - 0.11 12.4 0.1 0.17 11.8 0.1 1.3 1 0 0 1 1 1 0 CLIP1 zinc knuckle Arena_glycoprot PF00798.18 ORF106894 - 0.041 12.5 0.1 0.041 12.5 0.1 1.0 1 0 0 1 1 1 0 Arenavirus glycoprotein Flavi_glycop_C PF02832.16 ORF10687 - 0.012 15.7 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Flavivirus glycoprotein, immunoglobulin-like domain DUF1685 PF07939.11 ORF106673 - 0.013 15.3 0.0 0.018 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) DUF3839 PF12943.7 ORF106404 - 0.033 13.7 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) Asp4 PF16996.5 ORF106029 - 0.015 15.1 0.3 4.8 7.1 0.0 2.3 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 DUF2182 PF09948.9 ORF105868 - 0.079 12.8 1.1 2.3 8.1 0.3 2.0 2 0 0 2 2 2 0 Predicted metal-binding integral membrane protein (DUF2182) OCRE PF17780.1 ORF105036 - 0.041 13.9 0.1 0.068 13.2 0.1 1.4 1 0 0 1 1 1 0 OCRE domain Hen1_Lam_C PF18441.1 ORF104915 - 0.099 12.5 1.5 6.4 6.6 0.1 2.0 1 1 1 2 2 2 0 Hen1 La-motif C-terminal domain PGM_PMM_IV PF00408.20 ORF103767 - 0.19 11.9 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF948 PF06103.11 ORF103434 - 0.0012 19.0 8.1 0.0014 18.8 8.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) SSP160 PF06933.11 ORF103434 - 3.7 5.6 17.6 5.1 5.2 17.6 1.3 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Ntox17 PF15524.6 ORF102572 - 0.19 12.0 0.0 0.23 11.8 0.0 1.1 1 0 0 1 1 1 0 Novel toxin 17 CAAD PF14159.6 ORF101677 - 0.013 15.3 0.4 0.018 14.9 0.3 1.3 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase FANCL_C PF11793.8 ORF10137 - 0.011 15.8 0.1 0.015 15.4 0.1 1.2 1 0 0 1 1 1 0 FANCL C-terminal domain FKBP_C PF00254.28 ORF101324 - 0.0041 17.4 0.0 0.0051 17.1 0.0 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Ras PF00071.22 ORF100634 - 1.3e-21 76.9 0.1 1.4e-21 76.8 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF100634 - 2.3e-12 47.2 0.0 2.3e-12 47.2 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF100634 - 0.00016 21.2 0.0 0.00017 21.1 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family RNase_P_p30 PF01876.16 NODE_66997_length_238_cov_0.886700_g59056_i0forward_frame_1 - 0.1 12.1 0.2 0.13 11.7 0.2 1.0 1 0 0 1 1 1 0 RNase P subunit p30 RE_EcoO109I PF14511.6 NODE_66987_length_238_cov_1.177340_g59046_i0forward_frame_1 - 0.013 15.1 0.2 0.015 14.9 0.2 1.1 1 0 0 1 1 1 0 Type II restriction endonuclease EcoO109I Phospholip_A2_3 PF09056.11 NODE_66978_length_238_cov_1.241379_g59037_i0forward_frame_1 - 0.025 15.2 0.8 0.026 15.1 0.8 1.1 1 0 0 1 1 1 0 Prokaryotic phospholipase A2 ADK_lid PF05191.14 NODE_66971_length_238_cov_1.325123_g59030_i0forward_frame_1 - 0.0044 17.0 3.8 0.028 14.4 0.1 2.4 2 0 0 2 2 2 2 Adenylate kinase, active site lid DUF3844 PF12955.7 NODE_66971_length_238_cov_1.325123_g59030_i0forward_frame_1 - 0.88 9.7 4.8 1 9.5 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) PP2C PF00481.21 NODE_66959_length_238_cov_1.477833_g59018_i0forward_frame_1 - 3.1e-12 46.7 0.0 3.2e-12 46.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C zf-LITAF-like PF10601.9 NODE_66956_length_238_cov_1.517241_g59015_i0forward_frame_1 - 3.9e-10 39.8 18.1 4.8e-10 39.5 18.1 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain RCC1 PF00415.18 NODE_66953_length_238_cov_1.561576_g59012_i0forward_frame_1 - 1.2e-18 67.4 0.1 3.4e-10 40.4 0.0 2.0 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_66953_length_238_cov_1.561576_g59012_i0forward_frame_1 - 7.3e-14 51.1 4.2 1.2e-10 40.8 1.7 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF2838 PF10998.8 NODE_66950_length_238_cov_1.571429_g59009_i0forward_frame_1 - 1.7 8.9 12.0 1.7 8.9 12.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) CAAX_1 PF15895.5 NODE_66948_length_238_cov_1.576355_g59007_i0forward_frame_1 - 0.046 13.6 3.3 0.052 13.5 3.3 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 Spexin PF15171.6 NODE_66940_length_238_cov_1.635468_g58999_i0forward_frame_1 - 0.11 12.7 0.0 0.17 12.1 0.0 1.4 1 1 0 1 1 1 0 Neuropeptide secretory protein family, NPQ, spexin FerA PF08165.11 NODE_66934_length_238_cov_1.738916_g58993_i0reverse_frame_1 - 0.012 15.6 0.3 0.014 15.3 0.3 1.1 1 0 0 1 1 1 0 FerA (NUC095) domain FhuF_C PF11575.8 NODE_66932_length_238_cov_1.768473_g58991_i0forward_frame_1 - 0.065 13.2 0.3 0.065 13.2 0.3 1.8 2 0 0 2 2 2 0 FhuF 2Fe-2S C-terminal domain GHD PF17834.1 NODE_66931_length_238_cov_1.773399_g58990_i0reverse_frame_1 - 0.052 13.6 0.2 0.064 13.3 0.2 1.1 1 0 0 1 1 1 0 Beta-sandwich domain in beta galactosidase CxC1 PF18802.1 NODE_66918_length_238_cov_1.940887_g58977_i0forward_frame_1 - 0.025 14.7 0.1 0.034 14.3 0.1 1.2 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases PAM2 PF07145.15 NODE_66917_length_238_cov_1.940887_g58976_i0reverse_frame_1 - 9.2 6.2 7.6 21 5.1 0.1 3.7 4 0 0 4 4 4 0 Ataxin-2 C-terminal region Lamprin PF06403.11 NODE_66917_length_238_cov_1.940887_g58976_i0forward_frame_1 - 0.13 12.2 4.5 0.17 11.8 4.5 1.2 1 0 0 1 1 1 0 Lamprin Kelch_2 PF07646.15 NODE_66911_length_238_cov_2.108374_g58970_i0forward_frame_1 - 0.037 14.0 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 Kelch motif CobS_N PF12556.8 NODE_66904_length_238_cov_2.246305_g58963_i0reverse_frame_1 - 0.15 11.8 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Cobaltochelatase CobS subunit N terminal CK_II_beta PF01214.18 NODE_66903_length_238_cov_2.251232_g58962_i0reverse_frame_1 - 0.011 15.6 0.4 0.012 15.5 0.4 1.1 1 0 0 1 1 1 0 Casein kinase II regulatory subunit FlhD PF05247.13 NODE_66896_length_238_cov_2.536946_g58955_i0reverse_frame_1 - 3e-25 88.4 1.1 3.4e-25 88.3 1.1 1.0 1 0 0 1 1 1 1 Flagellar transcriptional activator (FlhD) DUF2857 PF11198.8 NODE_66896_length_238_cov_2.536946_g58955_i0reverse_frame_1 - 0.021 14.6 0.4 0.024 14.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) Croc_4 PF17691.1 NODE_66887_length_238_cov_2.753695_g58946_i0forward_frame_1 - 0.00013 22.1 2.5 0.00015 21.8 2.5 1.0 1 0 0 1 1 1 1 Contingent replication of cDNA 4 Microvir_lysis PF04517.12 NODE_66886_length_238_cov_2.753695_g58945_i0reverse_frame_1 - 0.059 13.3 1.9 0.059 13.3 1.9 1.8 1 1 0 1 1 1 0 Microvirus lysis protein (E), C terminus ADH_zinc_N PF00107.26 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 1.6e-10 41.1 0.4 1.6e-10 41.1 0.4 1.5 2 0 0 2 2 2 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 9.1e-06 25.1 1.3 1.1e-05 24.9 1.3 1.0 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Glu_dehyd_C PF16912.5 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.00078 19.0 0.1 0.00084 18.9 0.1 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus TrkA_N PF02254.18 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.015 15.5 0.3 0.019 15.2 0.3 1.1 1 0 0 1 1 1 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.021 14.4 0.4 0.023 14.3 0.4 1.1 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.023 14.0 0.1 0.025 13.9 0.1 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.025 14.8 0.3 0.029 14.6 0.3 1.1 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ThiF PF00899.21 NODE_66884_length_238_cov_2.847291_g58943_i0reverse_frame_1 - 0.053 12.9 2.6 0.039 13.3 1.5 1.3 2 0 0 2 2 2 0 ThiF family TMEM234 PF10639.9 NODE_66881_length_238_cov_3.054187_g58940_i0forward_frame_1 - 0.032 14.3 0.2 0.039 14.0 0.2 1.3 1 1 0 1 1 1 0 Putative transmembrane family 234 TSGP1 PF07771.11 NODE_66881_length_238_cov_3.054187_g58940_i0forward_frame_1 - 0.16 12.1 0.5 0.16 12.1 0.5 1.5 2 0 0 2 2 2 0 Tick salivary peptide group 1 LAT PF15234.6 NODE_66876_length_238_cov_3.236453_g58935_i0reverse_frame_1 - 0.78 9.4 1.7 0.88 9.3 1.7 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells RPW8 PF05659.11 NODE_66876_length_238_cov_3.236453_g58935_i0forward_frame_1 - 0.03 14.0 0.1 0.037 13.7 0.1 1.1 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Dimer_Tnp_hAT PF05699.14 NODE_66870_length_238_cov_4.133005_g58929_i0reverse_frame_1 - 0.059 13.2 0.1 0.085 12.7 0.1 1.3 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region Cys_rich_CPXG PF14255.6 NODE_66865_length_238_cov_24.088670_g58924_i0forward_frame_1 - 0.014 15.3 2.3 0.014 15.3 2.3 1.5 2 0 0 2 2 2 0 Cysteine-rich CPXCG PPR_2 PF13041.6 NODE_66861_length_238_cov_34.477833_g58920_i0reverse_frame_1 - 0.16 12.2 0.0 0.22 11.8 0.0 1.2 1 0 0 1 1 1 0 PPR repeat family DBD_Tnp_Hermes PF10683.9 NODE_66858_length_238_cov_39.492611_g58917_i0forward_frame_1 - 0.18 11.5 0.3 4.6 7.0 0.3 2.2 2 0 0 2 2 2 0 Hermes transposase DNA-binding domain Na_K-ATPase PF00287.18 NODE_66851_length_238_cov_46.674877_g58910_i0forward_frame_1 - 0.25 10.5 1.5 0.29 10.3 1.5 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain DUF4627 PF15425.6 NODE_66843_length_238_cov_59.689655_g58902_i0reverse_frame_1 - 0.021 14.5 0.2 0.023 14.3 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4627) DUF4813 PF16072.5 NODE_66839_length_238_cov_65.645320_g58898_i0reverse_frame_1 - 0.013 15.2 0.1 0.014 15.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4813) SWIM PF04434.17 NODE_66836_length_238_cov_73.502463_g58895_i0forward_frame_1 - 0.18 11.5 5.9 0.21 11.3 5.4 1.4 1 1 0 1 1 1 0 SWIM zinc finger Glyc_hyd_38C_2 PF18230.1 NODE_66835_length_238_cov_74.945813_g58894_i0forward_frame_1 - 0.016 15.3 0.0 0.018 15.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal sub-domain Nrap PF03813.14 NODE_66834_length_238_cov_75.556650_g58893_i0forward_frame_1 - 0.028 14.5 0.0 0.029 14.4 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 1 SKI PF01202.22 NODE_66834_length_238_cov_75.556650_g58893_i0forward_frame_1 - 0.072 13.2 0.1 0.077 13.1 0.1 1.0 1 0 0 1 1 1 0 Shikimate kinase DUF4333 PF14230.6 NODE_66834_length_238_cov_75.556650_g58893_i0forward_frame_1 - 0.097 12.9 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4333) Tissue_fac PF01108.17 NODE_66821_length_238_cov_145.935961_g58880_i0forward_frame_1 - 0.017 14.9 0.0 0.019 14.8 0.0 1.2 1 0 0 1 1 1 0 Tissue factor DUF5482 PF17579.2 NODE_66819_length_238_cov_152.305419_g58878_i0reverse_frame_1 - 0.065 13.1 0.2 0.069 13.0 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5482) DUF3463 PF11946.8 NODE_66817_length_238_cov_198.359606_g58876_i0reverse_frame_1 - 0.042 13.7 0.0 0.051 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) DUF3562 PF12085.8 NODE_66814_length_238_cov_240.261084_g58873_i0reverse_frame_1 - 0.073 12.7 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) HXXEE PF13787.6 NODE_66811_length_238_cov_355.857143_g58870_i0forward_frame_1 - 0.48 11.2 4.4 0.58 11.0 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif SR1P PF13790.6 NODE_66810_length_238_cov_7198.911330_g58869_i0reverse_frame_1 - 0.078 13.1 0.3 0.18 11.9 0.1 1.8 1 1 1 2 2 2 0 SR1 protein Helicase_C PF00271.31 NODE_66802_length_239_cov_0.980392_g58861_i0forward_frame_1 - 1.6e-08 34.9 1.2 2.9e-08 34.0 1.2 1.4 1 1 0 1 1 1 1 Helicase conserved C-terminal domain DUF3591 PF12157.8 NODE_66802_length_239_cov_0.980392_g58861_i0forward_frame_1 - 0.02 13.6 0.3 0.02 13.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3591) RRM_1 PF00076.22 NODE_66801_length_239_cov_0.980392_g58860_i0forward_frame_1 - 0.0034 17.2 0.1 0.0041 16.9 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CLTH PF10607.9 NODE_66790_length_239_cov_1.132353_g58849_i0reverse_frame_1 - 0.16 11.9 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain lci PF12197.8 NODE_66779_length_239_cov_1.176471_g58838_i0reverse_frame_1 - 0.093 12.5 0.4 0.093 12.5 0.4 2.4 2 1 0 2 2 2 0 Bacillus cereus group antimicrobial protein Keratin_2_head PF16208.5 NODE_66778_length_239_cov_1.176471_g58837_i0forward_frame_1 - 1.3 9.1 8.3 1.5 8.9 8.3 1.0 1 0 0 1 1 1 0 Keratin type II head MarR PF01047.22 NODE_66773_length_239_cov_1.235294_g58832_i0forward_frame_1 - 0.22 11.4 0.5 3.1 7.8 0.1 2.1 2 0 0 2 2 2 0 MarR family DUF4222 PF13973.6 NODE_66772_length_239_cov_1.264706_g58831_i0forward_frame_1 - 0.046 13.3 0.0 0.078 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4222) Slx4 PF09494.10 NODE_66763_length_239_cov_1.367647_g58822_i0forward_frame_1 - 0.056 13.4 0.0 0.061 13.3 0.0 1.1 1 0 0 1 1 1 0 Slx4 endonuclease Mntp PF02659.15 NODE_66762_length_239_cov_1.372549_g58821_i0reverse_frame_1 - 0.13 12.0 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Putative manganese efflux pump DUF3238 PF11579.8 NODE_66761_length_239_cov_1.372549_g58820_i0reverse_frame_1 - 0.012 15.5 0.0 0.013 15.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3238) SIP1 PF04938.12 NODE_66760_length_239_cov_1.372549_g58819_i0forward_frame_1 - 0.066 12.9 0.2 0.082 12.6 0.2 1.0 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) zf-UBP_var PF17807.1 NODE_66759_length_239_cov_1.372549_g58818_i0forward_frame_1 - 0.0085 15.8 0.3 0.012 15.4 0.3 1.2 1 0 0 1 1 1 1 Variant UBP zinc finger DUF5558 PF17713.1 NODE_66758_length_239_cov_1.411765_g58817_i0forward_frame_1 - 0.76 10.2 4.9 0.82 10.1 4.9 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5558) Treacle PF03546.14 NODE_66753_length_239_cov_1.446078_g58812_i0reverse_frame_1 - 0.09 11.6 0.3 0.1 11.4 0.3 1.0 1 0 0 1 1 1 0 Treacher Collins syndrome protein Treacle Lamprin PF06403.11 NODE_66752_length_239_cov_1.450980_g58811_i0reverse_frame_1 - 0.13 12.2 5.9 0.21 11.5 5.9 1.5 1 1 0 1 1 1 0 Lamprin APH PF01636.23 NODE_66747_length_239_cov_1.500000_g58806_i0reverse_frame_1 - 0.02 14.8 0.2 0.036 14.0 0.1 1.5 1 1 1 2 2 2 0 Phosphotransferase enzyme family DUF5616 PF18481.1 NODE_66747_length_239_cov_1.500000_g58806_i0reverse_frame_1 - 0.12 12.8 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5616) HTH_42 PF06224.12 NODE_66746_length_239_cov_1.504902_g58805_i0reverse_frame_1 - 0.029 13.9 0.2 0.035 13.6 0.2 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain HemY_N PF07219.13 NODE_66746_length_239_cov_1.504902_g58805_i0reverse_frame_1 - 0.057 13.6 0.9 0.069 13.3 0.9 1.1 1 0 0 1 1 1 0 HemY protein N-terminus TraE PF05309.11 NODE_66746_length_239_cov_1.504902_g58805_i0reverse_frame_1 - 0.15 11.4 1.5 0.17 11.2 1.5 1.1 1 0 0 1 1 1 0 TraE protein PspB PF06667.12 NODE_66746_length_239_cov_1.504902_g58805_i0reverse_frame_1 - 2.2 8.4 7.1 7.4 6.7 0.0 2.1 1 1 1 2 2 2 0 Phage shock protein B DUF1116 PF06545.11 NODE_66745_length_239_cov_1.509804_g58804_i0reverse_frame_1 - 0.05 13.1 0.1 0.062 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1116) Popeye PF04831.13 NODE_66738_length_239_cov_1.568627_g58797_i0reverse_frame_1 - 0.031 14.4 1.5 0.036 14.2 1.5 1.1 1 0 0 1 1 1 0 Popeye protein conserved region TP6A_N PF04406.14 NODE_66738_length_239_cov_1.568627_g58797_i0forward_frame_1 - 0.07 13.1 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Type IIB DNA topoisomerase PRA1 PF03208.19 NODE_66730_length_239_cov_1.607843_g58789_i0reverse_frame_1 - 0.022 14.4 3.1 0.025 14.2 3.1 1.1 1 0 0 1 1 1 0 PRA1 family protein ITAM_Cys-rich PF10538.9 NODE_66729_length_239_cov_1.607843_g58788_i0forward_frame_1 - 0.063 13.0 0.1 0.063 13.0 0.1 2.2 3 0 0 3 3 3 0 Immunoreceptor tyrosine-based activation motif COX17 PF05051.13 NODE_66725_length_239_cov_1.691176_g58784_i0forward_frame_1 - 0.22 11.9 11.7 0.27 11.6 8.5 2.1 2 0 0 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) DUF3073 PF11273.8 NODE_66720_length_239_cov_1.808824_g58779_i0forward_frame_1 - 0.092 13.5 0.0 0.15 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) UL41A PF17591.2 NODE_66703_length_239_cov_2.107843_g58762_i0forward_frame_1 - 0.037 14.1 0.5 0.045 13.9 0.5 1.2 1 0 0 1 1 1 0 Herpesvirus UL41A DUF2182 PF09948.9 NODE_66701_length_239_cov_2.127451_g58760_i0reverse_frame_1 - 0.051 13.4 1.3 0.054 13.4 1.3 1.0 1 0 0 1 1 1 0 Predicted metal-binding integral membrane protein (DUF2182) CdhC PF03598.15 NODE_66699_length_239_cov_2.176471_g58758_i0forward_frame_1 - 0.055 13.3 0.1 0.065 13.1 0.1 1.0 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase complex beta subunit NaeI PF09126.10 NODE_66696_length_239_cov_2.240196_g58755_i0reverse_frame_1 - 0.021 14.1 0.0 0.025 13.8 0.0 1.0 1 0 0 1 1 1 0 Restriction endonuclease NaeI Adipokin_hormo PF06377.11 NODE_66696_length_239_cov_2.240196_g58755_i0reverse_frame_1 - 0.021 15.1 0.1 0.053 13.9 0.1 1.6 1 1 0 1 1 1 0 Adipokinetic hormone K-box PF01486.17 NODE_66692_length_239_cov_2.303922_g58751_i0reverse_frame_1 - 0.02 15.1 1.6 0.027 14.7 1.6 1.2 1 0 0 1 1 1 0 K-box region GIDA PF01134.22 NODE_66692_length_239_cov_2.303922_g58751_i0reverse_frame_1 - 0.11 11.6 0.3 0.1 11.6 0.3 1.0 1 0 0 1 1 1 0 Glucose inhibited division protein A Zip PF02535.22 NODE_66690_length_239_cov_2.338235_g58749_i0reverse_frame_1 - 1.1e-09 38.0 0.1 1.2e-09 37.8 0.1 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter Pex24p PF06398.11 NODE_66690_length_239_cov_2.338235_g58749_i0reverse_frame_1 - 0.12 11.3 0.2 0.2 10.6 0.2 1.4 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2207 PF09972.9 NODE_66690_length_239_cov_2.338235_g58749_i0reverse_frame_1 - 0.53 9.0 2.3 0.59 8.8 2.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Uricase PF01014.18 NODE_66686_length_239_cov_2.357843_g58745_i0reverse_frame_1 - 0.0068 16.7 0.2 0.0081 16.4 0.2 1.1 1 0 0 1 1 1 1 Uricase DUF1461 PF07314.11 NODE_66685_length_239_cov_2.357843_g58744_i0forward_frame_1 - 0.073 13.0 1.3 0.073 13.0 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) OmpA PF00691.20 NODE_66683_length_239_cov_2.401961_g58742_i0reverse_frame_1 - 1.6e-16 60.4 0.0 1.8e-16 60.3 0.0 1.0 1 0 0 1 1 1 1 OmpA family Nuc_rec_co-act PF08815.10 NODE_66683_length_239_cov_2.401961_g58742_i0reverse_frame_1 - 0.095 12.6 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 Nuclear receptor coactivator AAA PF00004.29 NODE_66683_length_239_cov_2.401961_g58742_i0reverse_frame_1 - 0.11 12.9 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TetR_C_5 PF08360.11 NODE_66680_length_239_cov_2.455882_g58739_i0reverse_frame_1 - 0.0068 16.6 0.4 0.0076 16.4 0.4 1.2 1 0 0 1 1 1 1 QacR-like protein, C-terminal region DUF1664 PF07889.12 NODE_66680_length_239_cov_2.455882_g58739_i0reverse_frame_1 - 0.083 12.9 1.6 0.09 12.8 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Phage_int_SAM_1 PF02899.17 NODE_66678_length_239_cov_2.475490_g58737_i0forward_frame_1 - 0.0052 17.1 0.2 0.0059 16.9 0.2 1.1 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain PTS_EIIC PF02378.18 NODE_66677_length_239_cov_2.504902_g58736_i0forward_frame_1 - 1.8e-18 66.7 0.3 2.1e-18 66.4 0.3 1.1 1 0 0 1 1 1 1 Phosphotransferase system, EIIC Clat_adaptor_s PF01217.20 NODE_66674_length_239_cov_2.549020_g58733_i0forward_frame_1 - 0.079 12.9 1.4 0.092 12.7 1.4 1.1 1 0 0 1 1 1 0 Clathrin adaptor complex small chain DUF4576 PF15144.6 NODE_66673_length_239_cov_2.549020_g58732_i0reverse_frame_1 - 0.35 10.8 1.5 0.51 10.3 1.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4576) Xan_ur_permease PF00860.20 NODE_66669_length_239_cov_2.764706_g58728_i0forward_frame_1 - 3.9e-10 39.0 6.6 4.1e-10 38.9 6.6 1.0 1 0 0 1 1 1 1 Permease family DLL_N PF12413.8 NODE_66668_length_239_cov_2.769608_g58727_i0forward_frame_1 - 0.067 14.4 0.0 0.077 14.2 0.0 1.1 1 0 0 1 1 1 0 Homeobox protein distal-less-like N terminal SDA1 PF05285.12 NODE_66666_length_239_cov_2.877451_g58725_i0reverse_frame_1 - 0.00098 18.6 4.3 0.0016 18.0 2.2 1.9 1 1 1 2 2 2 1 SDA1 DUF4354 PF14263.6 NODE_66663_length_239_cov_3.127451_g58722_i0reverse_frame_1 - 0.026 14.4 0.1 0.031 14.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) CBP_BcsN PF17038.5 NODE_66661_length_239_cov_3.250000_g58720_i0reverse_frame_1 - 0.089 12.2 0.2 0.11 11.9 0.2 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsN Gag_p15 PF08723.10 NODE_66658_length_239_cov_3.485294_g58717_i0reverse_frame_1 - 0.076 13.2 0.0 0.084 13.1 0.0 1.1 1 0 0 1 1 1 0 Gag protein p15 ZapB PF06005.12 NODE_66657_length_239_cov_3.529412_g58716_i0reverse_frame_1 - 0.018 15.5 3.6 0.024 15.1 3.6 1.1 1 0 0 1 1 1 0 Cell division protein ZapB Atg14 PF10186.9 NODE_66657_length_239_cov_3.529412_g58716_i0reverse_frame_1 - 0.018 14.1 1.5 0.019 14.1 1.5 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 SDF PF00375.18 NODE_66654_length_239_cov_3.745098_g58713_i0reverse_frame_1 - 1.9e-20 73.3 6.8 2e-20 73.2 6.8 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family FcoT PF10862.8 NODE_66650_length_239_cov_4.656863_g58709_i0reverse_frame_1 - 0.09 12.4 0.9 0.096 12.3 0.9 1.1 1 0 0 1 1 1 0 FcoT-like thioesterase domain Exo_endo_phos PF03372.23 NODE_66650_length_239_cov_4.656863_g58709_i0forward_frame_1 - 0.00039 20.0 0.0 0.00044 19.8 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family DAHP_synth_2 PF01474.16 NODE_66645_length_239_cov_6.779412_g58704_i0reverse_frame_1 - 0.034 12.7 0.7 0.035 12.6 0.7 1.0 1 0 0 1 1 1 0 Class-II DAHP synthetase family Gpi16 PF04113.14 NODE_66629_length_239_cov_44.446078_g58688_i0reverse_frame_1 - 0.16 10.4 0.0 0.16 10.4 0.0 1.1 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component Terminase_5 PF06056.12 NODE_66624_length_239_cov_46.774510_g58683_i0reverse_frame_1 - 0.087 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) LMP PF04778.12 NODE_66619_length_239_cov_58.107843_g58678_i0reverse_frame_1 - 0.013 15.4 0.0 0.014 15.3 0.0 1.0 1 0 0 1 1 1 0 LMP repeated region DUF4834 PF16118.5 NODE_66615_length_239_cov_64.196078_g58674_i0forward_frame_1 - 6.4 7.8 7.0 9.1 7.3 7.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Zip PF02535.22 NODE_66615_length_239_cov_64.196078_g58674_i0forward_frame_1 - 6.7 5.8 8.5 7.1 5.7 8.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Coilin_N PF15862.5 NODE_66615_length_239_cov_64.196078_g58674_i0forward_frame_1 - 8.2 6.2 11.7 9.5 6.0 11.7 1.1 1 0 0 1 1 1 0 Coilin N-terminus zf_CCCH_4 PF18345.1 NODE_66609_length_239_cov_82.397059_g58668_i0reverse_frame_1 - 0.00062 19.7 1.8 0.0038 17.2 1.8 2.3 1 1 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 NODE_66609_length_239_cov_82.397059_g58668_i0reverse_frame_1 - 0.0049 16.7 1.1 0.018 14.9 1.1 2.1 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_66609_length_239_cov_82.397059_g58668_i0reverse_frame_1 - 0.019 14.8 2.5 0.064 13.1 2.4 1.9 1 1 0 1 1 1 0 CCCH-type zinc finger zf-CCCH_3 PF15663.5 NODE_66609_length_239_cov_82.397059_g58668_i0reverse_frame_1 - 0.021 15.0 1.2 0.021 15.0 1.2 1.2 1 0 0 1 1 1 0 Zinc-finger containing family Ribosomal_S12 PF17487.2 NODE_66605_length_239_cov_93.426471_g58664_i0reverse_frame_1 - 0.097 13.4 0.1 0.12 13.2 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S12 DUF3949 PF13133.6 NODE_66597_length_239_cov_125.647059_g58656_i0reverse_frame_1 - 0.2 12.1 0.9 0.28 11.7 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3949) Plavaka PF18759.1 NODE_66593_length_239_cov_178.549020_g58652_i0reverse_frame_1 - 0.24 10.6 1.6 0.3 10.3 1.6 1.1 1 0 0 1 1 1 0 Plavaka transposase YMF19 PF02326.15 NODE_66592_length_239_cov_193.318627_g58651_i0reverse_frame_1 - 0.064 14.0 0.1 0.07 13.9 0.1 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 DUF543 PF04418.12 NODE_66577_length_240_cov_0.780488_g58636_i0forward_frame_1 - 0.11 12.5 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF543) Peptidase_C2 PF00648.21 NODE_66571_length_240_cov_0.975610_g58630_i0reverse_frame_1 - 4.1e-12 45.7 0.0 4.5e-12 45.6 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease UL11 PF11094.8 NODE_66570_length_240_cov_0.990244_g58629_i0forward_frame_1 - 0.1 12.5 0.1 0.16 11.8 0.1 1.4 1 0 0 1 1 1 0 Membrane-associated tegument protein TIC20 PF16166.5 NODE_66569_length_240_cov_1.039024_g58628_i0reverse_frame_1 - 0.01 15.6 1.4 0.012 15.4 1.4 1.1 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like RCC1_2 PF13540.6 NODE_66566_length_240_cov_1.112195_g58625_i0reverse_frame_1 - 0.015 15.1 0.3 0.025 14.4 0.3 1.4 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat G3P_acyltransf PF02660.15 NODE_66562_length_240_cov_1.156098_g58621_i0forward_frame_1 - 1.8 8.6 11.5 2.2 8.3 11.5 1.0 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase Endothelin PF00322.17 NODE_66558_length_240_cov_1.170732_g58617_i0reverse_frame_1 - 1.5 8.5 10.7 1.6 8.4 4.8 2.2 2 0 0 2 2 2 0 Endothelin family Vps16_C PF04840.12 NODE_66554_length_240_cov_1.248780_g58613_i0forward_frame_1 - 0.016 14.3 0.0 0.018 14.1 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region KIX PF02172.16 NODE_66552_length_240_cov_1.287805_g58611_i0forward_frame_1 - 0.047 14.0 0.4 0.071 13.4 0.4 1.3 1 0 0 1 1 1 0 KIX domain HTH_11 PF08279.12 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.00025 20.9 0.0 0.00035 20.5 0.0 1.2 1 0 0 1 1 1 1 HTH domain Sigma70_r4_2 PF08281.12 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0011 18.6 0.0 0.0017 18.0 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0014 18.4 0.0 0.0019 17.9 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain Phage_terminase PF10668.9 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0023 17.9 0.1 0.0028 17.6 0.1 1.3 1 0 0 1 1 1 1 Phage terminase small subunit Sigma70_r4 PF04545.16 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0032 17.0 0.0 0.0048 16.4 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 DUF1804 PF08822.11 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0058 16.6 0.2 0.007 16.4 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1804) GerE PF00196.19 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.0094 15.5 0.1 0.013 15.0 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_36 PF13730.6 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.022 14.7 0.1 0.034 14.1 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_1 - 0.03 13.9 0.0 0.045 13.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks334.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks334.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks334.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks334.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:21:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RabGAP-TBC PF00566.18 NODE_66529_length_240_cov_1.526829_g58588_i0reverse_frame_1 - 2.3e-17 63.4 1.0 2.7e-17 63.1 1.0 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain LexA_DNA_bind PF01726.16 NODE_66528_length_240_cov_1.531707_g58587_i0reverse_frame_1 - 0.19 11.5 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain RE_R_Pab1 PF09522.10 NODE_66527_length_240_cov_1.541463_g58586_i0reverse_frame_1 - 0.044 13.9 0.1 0.051 13.7 0.1 1.2 1 0 0 1 1 1 0 R.Pab1 restriction endonuclease Fanconi_C PF02106.15 NODE_66523_length_240_cov_1.556098_g58582_i0forward_frame_1 - 0.0045 15.8 0.0 0.0052 15.6 0.0 1.0 1 0 0 1 1 1 1 Fanconi anaemia group C protein DEAD PF00270.29 NODE_66523_length_240_cov_1.556098_g58582_i0forward_frame_1 - 0.081 12.7 0.0 0.51 10.1 0.0 1.9 1 1 1 2 2 2 0 DEAD/DEAH box helicase Urocanase_N PF17391.2 NODE_66523_length_240_cov_1.556098_g58582_i0forward_frame_1 - 0.098 12.3 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Urocanase N-terminal domain Ras PF00071.22 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 5.1e-23 81.5 0.5 5.4e-23 81.4 0.5 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 6e-05 23.2 0.1 0.0001 22.5 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 0.01 15.3 0.1 0.01 15.3 0.1 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 0.043 13.8 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain GTP_EFTU PF00009.27 NODE_66519_length_240_cov_1.609756_g58578_i0reverse_frame_1 - 0.095 12.2 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Ion_trans PF00520.31 NODE_66512_length_240_cov_1.673171_g58571_i0forward_frame_1 - 0.00033 19.9 5.3 0.00042 19.6 5.3 1.0 1 0 0 1 1 1 1 Ion transport protein DUF4062 PF13271.6 NODE_66511_length_240_cov_1.678049_g58570_i0forward_frame_1 - 0.088 13.2 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4062) Vitelline_membr PF10542.9 NODE_66508_length_240_cov_1.697561_g58567_i0reverse_frame_1 - 0.15 12.0 0.3 0.23 11.4 0.3 1.3 1 0 0 1 1 1 0 Vitelline membrane cysteine-rich region DUF1242 PF06842.12 NODE_66507_length_240_cov_1.712195_g58566_i0forward_frame_1 - 0.059 13.2 2.4 0.15 11.9 2.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1242) Tafi-CsgC PF10610.9 NODE_66507_length_240_cov_1.712195_g58566_i0forward_frame_1 - 0.071 13.3 0.3 0.091 13.0 0.3 1.2 1 0 0 1 1 1 0 Thin aggregative fimbriae synthesis protein polyprenyl_synt PF00348.17 NODE_66499_length_240_cov_1.853659_g58558_i0reverse_frame_1 - 0.00091 18.4 0.0 0.001 18.2 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase C1-set PF07654.15 NODE_66489_length_240_cov_1.931707_g58548_i0reverse_frame_1 - 0.067 13.6 0.0 0.088 13.2 0.0 1.1 1 0 0 1 1 1 0 Immunoglobulin C1-set domain DUF4860 PF16152.5 NODE_66486_length_240_cov_1.946341_g58545_i0reverse_frame_1 - 0.054 13.4 0.0 0.06 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4860) CENP-N PF05238.13 NODE_66486_length_240_cov_1.946341_g58545_i0reverse_frame_1 - 0.1 11.9 0.3 0.1 11.9 0.3 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like TRP PF06011.12 NODE_66485_length_240_cov_1.946341_g58544_i0reverse_frame_1 - 6.1e-07 28.5 2.0 6.6e-07 28.4 2.0 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Asparaginase PF00710.20 NODE_66484_length_240_cov_1.946341_g58543_i0reverse_frame_1 - 2.3e-06 27.3 0.2 2.7e-06 27.1 0.2 1.1 1 0 0 1 1 1 1 Asparaginase, N-terminal MASE1 PF05231.14 NODE_66484_length_240_cov_1.946341_g58543_i0reverse_frame_1 - 0.068 12.3 0.4 0.075 12.2 0.4 1.0 1 0 0 1 1 1 0 MASE1 Tic110 PF16940.5 NODE_66484_length_240_cov_1.946341_g58543_i0reverse_frame_1 - 0.17 10.4 0.8 0.17 10.3 0.8 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter Ral PF11058.8 NODE_66481_length_240_cov_2.000000_g58540_i0reverse_frame_1 - 0.036 13.6 0.1 0.05 13.2 0.1 1.2 1 0 0 1 1 1 0 Antirestriction protein Ral Pkinase PF00069.25 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 8.7e-14 51.5 2.0 9.2e-14 51.4 2.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 7.5e-07 28.7 0.2 8.5e-07 28.5 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 0.0047 16.3 0.1 0.0055 16.1 0.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 0.008 15.8 0.3 0.0088 15.7 0.3 1.0 1 0 0 1 1 1 1 RIO1 family Pox_ser-thr_kin PF05445.11 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_1 - 0.012 14.6 1.7 0.012 14.6 1.7 1.6 1 1 0 2 2 2 0 Poxvirus serine/threonine protein kinase DUF2921 PF11145.8 NODE_66474_length_240_cov_2.107317_g58533_i0reverse_frame_1 - 0.11 10.3 0.1 0.13 10.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2921) Mad3_BUB1_I_2 PF17014.5 NODE_66472_length_240_cov_2.121951_g58531_i0reverse_frame_1 - 0.018 15.2 0.2 0.02 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein DUF416 PF04222.12 NODE_66469_length_240_cov_2.136585_g58528_i0forward_frame_1 - 3.3e-30 104.9 0.0 3.5e-30 104.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF416) Folate_rec PF03024.14 NODE_66463_length_240_cov_2.209756_g58522_i0reverse_frame_1 - 0.021 14.7 1.3 0.022 14.6 1.3 1.1 1 0 0 1 1 1 0 Folate receptor family Peptidase_Prp PF04327.12 NODE_66460_length_240_cov_2.253659_g58519_i0reverse_frame_1 - 0.095 13.0 0.0 0.099 12.9 0.0 1.2 1 0 0 1 1 1 0 Cysteine protease Prp DUF4713 PF15831.5 NODE_66458_length_240_cov_2.263415_g58517_i0forward_frame_1 - 0.006 17.0 1.3 0.009 16.4 1.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4713) RVT_1 PF00078.27 NODE_66457_length_240_cov_2.282927_g58516_i0reverse_frame_1 - 7.8e-09 35.4 0.0 8.5e-09 35.2 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4961 PF16328.5 NODE_66455_length_240_cov_2.312195_g58514_i0reverse_frame_1 - 0.13 11.5 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4961) DUF1623 PF07785.11 NODE_66452_length_240_cov_2.375610_g58511_i0forward_frame_1 - 0.09 13.0 0.0 0.099 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1623) Viral_DNA_bp PF00747.17 NODE_66452_length_240_cov_2.375610_g58511_i0forward_frame_1 - 0.094 9.9 0.0 0.098 9.8 0.0 1.0 1 0 0 1 1 1 0 ssDNA binding protein DUF169 PF02596.15 NODE_66451_length_240_cov_2.429268_g58510_i0reverse_frame_1 - 0.0062 16.5 0.0 0.0063 16.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 RICTOR_M PF14666.6 NODE_66443_length_240_cov_2.760976_g58502_i0forward_frame_1 - 0.095 12.5 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain Recombinase PF07508.13 NODE_66442_length_240_cov_2.775610_g58501_i0forward_frame_1 - 4.6e-11 43.0 0.0 5.7e-11 42.7 0.0 1.1 1 0 0 1 1 1 1 Recombinase Vac14_Fab1_bd PF12755.7 NODE_66440_length_240_cov_2.809756_g58499_i0forward_frame_1 - 0.083 13.5 0.1 0.096 13.3 0.1 1.2 1 0 0 1 1 1 0 Vacuolar 14 Fab1-binding region DNA_pol_B_thumb PF14791.6 NODE_66440_length_240_cov_2.809756_g58499_i0forward_frame_1 - 0.13 12.4 0.1 0.15 12.3 0.1 1.1 1 0 0 1 1 1 0 DNA polymerase beta thumb NIR_SIR PF01077.22 NODE_66429_length_240_cov_5.682927_g58488_i0reverse_frame_1 - 0.018 14.6 0.1 0.02 14.4 0.1 1.1 1 0 0 1 1 1 0 Nitrite and sulphite reductase 4Fe-4S domain COP-gamma_platf PF08752.10 NODE_66426_length_240_cov_17.648780_g58485_i0forward_frame_1 - 0.067 13.3 1.0 0.09 12.9 1.0 1.2 1 0 0 1 1 1 0 Coatomer gamma subunit appendage platform subdomain DUF2628 PF10947.8 NODE_66426_length_240_cov_17.648780_g58485_i0forward_frame_1 - 8.4 6.8 7.6 11 6.5 5.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2628) DUF5554 PF17709.1 NODE_66425_length_240_cov_17.775610_g58484_i0forward_frame_1 - 0.078 13.1 3.0 0.11 12.6 3.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5554) TraG_N PF07916.11 NODE_66424_length_240_cov_19.112195_g58483_i0forward_frame_1 - 1.5 7.6 5.0 1.5 7.6 5.0 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region CAP160 PF07918.11 NODE_66423_length_240_cov_28.965854_g58482_i0reverse_frame_1 - 0.18 11.6 0.0 0.26 11.1 0.0 1.1 1 0 0 1 1 1 0 CAP160 repeat Acylphosphatase PF00708.18 NODE_66423_length_240_cov_28.965854_g58482_i0forward_frame_1 - 0.013 15.9 0.2 0.021 15.2 0.2 1.4 1 1 0 1 1 1 0 Acylphosphatase PDH_E1_M PF17831.1 NODE_66423_length_240_cov_28.965854_g58482_i0forward_frame_1 - 0.061 12.8 0.1 0.066 12.7 0.1 1.1 1 0 0 1 1 1 0 Pyruvate dehydrogenase E1 component middle domain DUF5402 PF17393.2 NODE_66423_length_240_cov_28.965854_g58482_i0forward_frame_1 - 0.07 13.1 0.1 0.082 12.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5402) DUF3721 PF12518.8 NODE_66423_length_240_cov_28.965854_g58482_i0forward_frame_1 - 0.14 12.0 0.0 0.29 11.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF4692 PF15763.5 NODE_66421_length_240_cov_30.980488_g58480_i0forward_frame_1 - 0.37 11.3 8.2 0.43 11.0 8.2 1.2 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) SR-25 PF10500.9 NODE_66421_length_240_cov_30.980488_g58480_i0forward_frame_1 - 2.4 7.7 22.0 2.5 7.6 22.0 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CCDC106 PF15794.5 NODE_66421_length_240_cov_30.980488_g58480_i0forward_frame_1 - 6.5 6.4 15.8 7.1 6.3 15.8 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 HGTP_anticodon2 PF12745.7 NODE_66421_length_240_cov_30.980488_g58480_i0forward_frame_1 - 7.4 6.0 11.4 8.1 5.9 11.4 1.0 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs Carla_C4 PF01623.17 NODE_66420_length_240_cov_32.092683_g58479_i0forward_frame_1 - 0.28 11.2 7.2 0.33 10.9 7.2 1.2 1 1 0 1 1 1 0 Carlavirus putative nucleic acid binding protein Kelch_5 PF13854.6 NODE_66419_length_240_cov_32.297561_g58478_i0forward_frame_1 - 0.00041 20.3 0.0 0.00055 19.9 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 NODE_66419_length_240_cov_32.297561_g58478_i0forward_frame_1 - 0.12 12.4 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain Occludin_ELL PF07303.13 NODE_66417_length_240_cov_32.829268_g58476_i0forward_frame_1 - 0.038 14.7 0.8 0.053 14.3 0.8 1.2 1 0 0 1 1 1 0 Occludin homology domain YtxH PF12732.7 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 0.0034 17.9 8.3 0.0044 17.5 8.3 1.1 1 0 0 1 1 1 1 YtxH-like protein RRF PF01765.19 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 0.0038 17.2 6.5 0.0044 17.0 6.5 1.1 1 0 0 1 1 1 1 Ribosome recycling factor DUF883 PF05957.13 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 0.028 15.0 0.6 0.034 14.8 0.6 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) SNARE PF05739.19 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 2.7 8.0 6.9 1.7 8.7 1.4 2.2 2 0 0 2 2 2 0 SNARE domain ETRAMP PF09716.10 NODE_66414_length_240_cov_37.604878_g58473_i0reverse_frame_1 - 4.5 7.4 13.7 1.8e+02 2.2 13.7 2.1 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) SR-25 PF10500.9 NODE_66411_length_240_cov_40.843902_g58470_i0reverse_frame_1 - 0.036 13.7 8.7 0.04 13.5 8.7 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein FA_desaturase PF00487.24 NODE_66408_length_240_cov_43.492683_g58467_i0forward_frame_1 - 0.027 14.3 2.7 0.032 14.1 2.7 1.1 1 0 0 1 1 1 0 Fatty acid desaturase Glutaminase PF04960.15 NODE_66399_length_240_cov_53.043902_g58458_i0reverse_frame_1 - 0.06 12.5 0.0 0.06 12.5 0.0 1.1 1 0 0 1 1 1 0 Glutaminase PHAT PF09246.10 NODE_66398_length_240_cov_53.058537_g58457_i0forward_frame_1 - 0.12 12.2 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 PHAT Glyco_hydro_42C PF08533.10 NODE_66398_length_240_cov_53.058537_g58457_i0forward_frame_1 - 0.13 12.0 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain PaRep2a PF07903.11 NODE_66398_length_240_cov_53.058537_g58457_i0forward_frame_1 - 0.16 11.8 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 PaRep2a protein ORC5_C PF14630.6 NODE_66394_length_240_cov_57.736585_g58453_i0forward_frame_1 - 0.059 12.9 0.2 0.063 12.8 0.2 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus DUF2102 PF09875.9 NODE_66392_length_240_cov_62.107317_g58451_i0reverse_frame_1 - 0.039 13.7 0.6 0.051 13.3 0.6 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) Ntox46 PF15538.6 NODE_66391_length_240_cov_68.682927_g58450_i0reverse_frame_1 - 0.03 14.3 0.4 0.03 14.3 0.4 1.1 1 0 0 1 1 1 0 Bacterial toxin 46 CENP-B_dimeris PF09026.10 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 0.043 14.2 4.1 0.048 14.0 4.1 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain YL1 PF05764.13 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 0.073 13.2 12.9 0.089 12.9 12.9 1.0 1 0 0 1 1 1 0 YL1 nuclear protein DUF4225 PF13988.6 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 0.074 12.6 1.3 0.1 12.1 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4225) VIT1 PF01988.19 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 1.3 8.9 3.1 1.4 8.7 3.1 1.1 1 0 0 1 1 1 0 VIT family CDC45 PF02724.14 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 2 6.6 8.7 2.3 6.4 8.7 1.0 1 0 0 1 1 1 0 CDC45-like protein DivIC PF04977.15 NODE_66385_length_240_cov_79.126829_g58444_i0reverse_frame_1 - 4.6 7.1 8.9 5.9 6.7 8.9 1.1 1 0 0 1 1 1 0 Septum formation initiator DUF2614 PF11023.8 NODE_66385_length_240_cov_79.126829_g58444_i0forward_frame_1 - 0.15 12.2 3.8 0.18 11.9 3.8 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain Coronavirus_5 PF05528.11 NODE_66383_length_240_cov_81.604878_g58442_i0reverse_frame_1 - 0.11 12.5 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Coronavirus gene 5 protein DUF836 PF05768.14 NODE_66383_length_240_cov_81.604878_g58442_i0forward_frame_1 - 0.11 12.9 0.5 0.55 10.7 0.5 1.9 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Lipocalin_2 PF08212.12 NODE_66379_length_240_cov_98.102439_g58438_i0forward_frame_1 - 8.9e-17 61.4 0.0 1e-16 61.2 0.0 1.0 1 0 0 1 1 1 1 Lipocalin-like domain Lipocalin PF00061.23 NODE_66379_length_240_cov_98.102439_g58438_i0forward_frame_1 - 0.0027 17.9 0.0 0.0031 17.7 0.0 1.1 1 0 0 1 1 1 1 Lipocalin / cytosolic fatty-acid binding protein family UBA_6 PF18039.1 NODE_66379_length_240_cov_98.102439_g58438_i0forward_frame_1 - 0.075 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 UBA-like domain Coat_F PF07875.12 NODE_66375_length_240_cov_108.214634_g58434_i0reverse_frame_1 - 0.13 12.6 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Coat F domain MgrB PF13998.6 NODE_66373_length_240_cov_115.760976_g58432_i0forward_frame_1 - 0.013 15.4 0.4 0.027 14.3 0.4 1.6 1 0 0 1 1 1 0 MgrB protein TEX19 PF15553.6 NODE_66363_length_240_cov_158.492683_g58422_i0reverse_frame_1 - 0.032 14.2 0.5 0.032 14.2 0.5 1.1 1 0 0 1 1 1 0 Testis-expressed protein 19 DUF3212 PF11486.8 NODE_66361_length_240_cov_178.248780_g58420_i0reverse_frame_1 - 0.081 13.0 0.4 0.089 12.8 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3212) RCC1_2 PF13540.6 NODE_66360_length_240_cov_221.126829_g58419_i0reverse_frame_1 - 6.4e-05 22.6 0.5 0.35 10.7 0.0 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 NODE_66360_length_240_cov_221.126829_g58419_i0reverse_frame_1 - 0.74 9.9 5.5 3.1 7.8 0.7 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Integrase_Zn PF02022.19 NODE_66360_length_240_cov_221.126829_g58419_i0forward_frame_1 - 0.011 15.7 0.4 3.3 7.7 0.0 2.5 2 1 0 2 2 2 0 Integrase Zinc binding domain Sua5_yciO_yrdC PF01300.18 NODE_66359_length_240_cov_262.258537_g58418_i0forward_frame_1 - 0.075 12.5 0.1 6.9 6.1 0.0 2.0 1 1 0 2 2 2 0 Telomere recombination RdRP PF05183.12 NODE_66339_length_241_cov_1.063107_g58398_i0reverse_frame_3 - 2.7e-05 23.0 0.0 2.8e-05 23.0 0.0 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase DUF4042 PF13251.6 NODE_66338_length_241_cov_1.121359_g58397_i0reverse_frame_3 - 0.016 14.9 0.4 0.017 14.8 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) WCCH PF03716.14 NODE_66338_length_241_cov_1.121359_g58397_i0forward_frame_3 - 0.0079 15.8 0.2 0.013 15.2 0.2 1.3 1 0 0 1 1 1 1 WCCH motif Lys PF00062.20 NODE_66337_length_241_cov_1.140777_g58396_i0forward_frame_2 - 0.018 15.3 0.8 0.031 14.5 0.8 1.5 1 1 0 1 1 1 0 C-type lysozyme/alpha-lactalbumin family Thioredoxin_16 PF18569.1 NODE_66337_length_241_cov_1.140777_g58396_i0forward_frame_2 - 0.054 13.6 0.2 0.061 13.4 0.2 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain SRTM1 PF15872.5 NODE_66335_length_241_cov_1.155340_g58394_i0reverse_frame_2 - 0.0086 16.2 3.2 0.01 16.0 3.2 1.1 1 0 0 1 1 1 1 Serine-rich and transmembrane domain-containing protein 1 FAR1 PF03101.15 NODE_66332_length_241_cov_1.160194_g58391_i0forward_frame_3 - 0.057 14.1 1.1 0.064 13.9 1.1 1.1 1 0 0 1 1 1 0 FAR1 DNA-binding domain MnhB PF04039.13 NODE_66332_length_241_cov_1.160194_g58391_i0forward_frame_2 - 0.1 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain related to MnhB subunit of Na+/H+ antiporter RCC1_2 PF13540.6 NODE_66331_length_241_cov_1.165049_g58390_i0reverse_frame_3 - 0.12 12.3 0.1 0.31 10.9 0.0 1.7 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat PNPase_C PF12111.8 NODE_66331_length_241_cov_1.165049_g58390_i0reverse_frame_2 - 0.052 13.0 0.5 0.097 12.1 0.5 1.5 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal CKS PF01111.19 NODE_66328_length_241_cov_1.165049_g58387_i0reverse_frame_3 - 2.1e-12 47.1 0.9 2.8e-12 46.7 0.9 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase regulatory subunit Gsf2 PF11055.8 NODE_66328_length_241_cov_1.165049_g58387_i0forward_frame_2 - 0.081 11.7 0.2 0.083 11.6 0.2 1.0 1 0 0 1 1 1 0 Glucose signalling factor 2 TBPIP PF07106.13 NODE_66326_length_241_cov_1.247573_g58385_i0reverse_frame_2 - 0.1 12.5 0.1 0.17 11.8 0.1 1.4 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain UPF0093 PF03653.13 NODE_66320_length_241_cov_1.344660_g58379_i0forward_frame_2 - 0.047 13.9 0.0 0.047 13.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) DUF1033 PF06279.11 NODE_66319_length_241_cov_1.354369_g58378_i0reverse_frame_3 - 0.03 14.5 0.6 0.035 14.3 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1033) RPW8 PF05659.11 NODE_66319_length_241_cov_1.354369_g58378_i0reverse_frame_3 - 0.053 13.2 0.1 0.063 13.0 0.1 1.2 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 AAA_6 PF12774.7 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 8.4e-43 146.6 0.2 9e-43 146.5 0.2 1.0 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_5 PF07728.14 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 4.6e-05 23.4 0.0 0.0023 17.9 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.00028 21.3 0.0 0.00032 21.1 0.0 1.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.00053 20.5 0.0 0.00065 20.2 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.018 15.4 0.1 0.034 14.5 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_7 PF12775.7 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.038 13.5 0.0 0.11 11.9 0.0 1.6 1 1 1 2 2 2 0 P-loop containing dynein motor region RNA_helicase PF00910.22 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.04 14.3 0.0 0.048 14.0 0.0 1.2 1 0 0 1 1 1 0 RNA helicase AAA_22 PF13401.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.088 13.1 0.2 0.2 11.9 0.0 1.6 1 1 1 2 2 2 0 AAA domain AAA_28 PF13521.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.089 13.0 0.1 0.097 12.9 0.1 1.3 1 1 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.092 12.5 0.1 0.092 12.5 0.1 1.2 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.12 12.1 0.5 0.35 10.6 0.4 1.6 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 NODE_66315_length_241_cov_1.359223_g58374_i0reverse_frame_2 - 0.12 12.1 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF4632 PF15451.6 NODE_66311_length_241_cov_1.398058_g58370_i0reverse_frame_3 - 0.036 14.1 2.5 5 7.3 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4632) MTHFR_C PF12225.8 NODE_66307_length_241_cov_1.412621_g58366_i0forward_frame_2 - 0.1 12.2 4.6 0.12 12.0 4.6 1.2 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal DUF3008 PF11450.8 NODE_66305_length_241_cov_1.436893_g58364_i0reverse_frame_2 - 0.064 13.4 0.2 0.099 12.8 0.1 1.4 1 1 0 1 1 1 0 Protein of unknwon function (DUF3008) Sas10_Utp3 PF04000.15 NODE_66305_length_241_cov_1.436893_g58364_i0forward_frame_2 - 0.047 14.3 0.1 0.049 14.3 0.1 1.1 1 0 0 1 1 1 0 Sas10/Utp3/C1D family Spc7_N PF15402.6 NODE_66305_length_241_cov_1.436893_g58364_i0forward_frame_2 - 0.2 9.9 4.8 0.22 9.7 4.8 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 Transp_cyt_pur PF02133.15 NODE_66304_length_241_cov_1.441748_g58363_i0forward_frame_2 - 0.61 8.8 7.3 0.64 8.7 7.3 1.0 1 0 0 1 1 1 0 Permease for cytosine/purines, uracil, thiamine, allantoin SR-25 PF10500.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.0066 16.1 22.3 0.0077 15.9 22.3 1.2 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein DUF4604 PF15377.6 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.028 14.9 15.0 0.03 14.7 15.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) AP3D1 PF06375.11 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.048 13.9 18.2 0.052 13.8 18.2 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Med19 PF10278.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.12 12.3 20.5 0.12 12.3 20.5 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF4770 PF15994.5 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.17 12.1 11.0 0.19 12.0 11.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) HA2 PF04408.23 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.19 12.0 3.8 0.23 11.8 3.8 1.1 1 0 0 1 1 1 0 Helicase associated domain (HA2) RNA_polI_A34 PF08208.11 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 0.4 10.7 21.5 0.42 10.7 21.5 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Eapp_C PF10238.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 1.2 9.2 9.0 1.4 9.0 9.0 1.1 1 0 0 1 1 1 0 E2F-associated phosphoprotein EIIBC-GUT_N PF03612.14 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 1.3 8.7 6.7 1.3 8.7 6.7 1.1 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Peptidase_S49_N PF08496.10 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 1.3 9.0 15.7 1.4 8.9 15.7 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Sec62 PF03839.16 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 1.5 8.2 11.5 1.6 8.2 11.5 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Connexin PF00029.19 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 2.1 8.0 10.3 2.3 7.9 10.3 1.1 1 0 0 1 1 1 0 Connexin DUF1682 PF07946.14 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 4.2 6.5 17.7 4.2 6.5 17.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) TMEM214 PF10151.9 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 4.8 5.5 13.4 4.4 5.6 13.4 1.0 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator OAD_gamma PF04277.13 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 6.6 7.4 7.4 11 6.7 7.4 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain O-antigen_lig PF13425.6 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 6.6 5.4 6.4 6.1 5.5 6.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Peroxin-13_N PF04088.13 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 7.1 6.9 6.5 8.5 6.6 6.5 1.1 1 0 0 1 1 1 0 Peroxin 13, N-terminal region MscS_TM PF12794.7 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 7.1 5.4 7.2 8.2 5.2 7.2 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Presenilin PF01080.17 NODE_66303_length_241_cov_1.446602_g58362_i0reverse_frame_3 - 9 4.9 7.4 8.2 5.1 7.4 1.0 1 0 0 1 1 1 0 Presenilin DUF4501 PF14946.6 NODE_66303_length_241_cov_1.446602_g58362_i0forward_frame_3 - 0.11 12.5 0.3 0.12 12.4 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Pex24p PF06398.11 NODE_66303_length_241_cov_1.446602_g58362_i0forward_frame_3 - 3.9 6.4 3.8 4.5 6.2 3.8 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin SUV3_C PF12513.8 NODE_66299_length_241_cov_1.480583_g58358_i0reverse_frame_3 - 0.11 12.5 0.1 0.19 11.7 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial degradasome RNA helicase subunit C terminal Baculo_LEF-2 PF03041.14 NODE_66296_length_241_cov_1.509709_g58355_i0reverse_frame_3 - 0.0038 16.9 2.6 0.0056 16.3 2.6 1.3 1 0 0 1 1 1 1 lef-2 Cytochrom_B562 PF07361.11 NODE_66295_length_241_cov_1.509709_g58354_i0reverse_frame_3 - 0.034 14.8 0.1 0.034 14.8 0.1 1.1 1 0 0 1 1 1 0 Cytochrome b562 TFIIS_M PF07500.14 NODE_66295_length_241_cov_1.509709_g58354_i0reverse_frame_3 - 0.057 13.9 0.1 0.061 13.8 0.1 1.1 1 0 0 1 1 1 0 Transcription factor S-II (TFIIS), central domain Annexin_like PF18411.1 NODE_66295_length_241_cov_1.509709_g58354_i0reverse_frame_3 - 0.12 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Annexin-like domain CUTL PF16557.5 NODE_66293_length_241_cov_1.529126_g58352_i0reverse_frame_3 - 0.05 13.8 0.9 0.063 13.5 0.9 1.2 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB CcmD PF04995.14 NODE_66287_length_241_cov_1.553398_g58346_i0reverse_frame_3 - 0.02 15.0 0.3 0.041 14.0 0.3 1.5 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Tsg PF04668.12 NODE_66287_length_241_cov_1.553398_g58346_i0reverse_frame_2 - 0.016 15.9 0.4 0.019 15.6 0.4 1.1 1 0 0 1 1 1 0 Twisted gastrulation (Tsg) protein conserved region WD40_alt PF14077.6 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.00048 19.9 1.3 0.00091 19.0 1.1 1.6 1 1 0 1 1 1 1 Alternative WD40 repeat motif Prefoldin PF02996.17 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.012 15.5 0.3 0.016 15.1 0.3 1.2 1 0 0 1 1 1 0 Prefoldin subunit SAC3_GANP PF03399.16 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.019 14.4 0.6 0.021 14.2 0.6 1.0 1 0 0 1 1 1 0 SAC3/GANP family NRIP1_repr_4 PF15690.5 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.029 13.7 1.2 0.033 13.5 1.2 1.0 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 4 MAD PF05557.13 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.04 12.3 5.7 0.043 12.2 5.7 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein MbeD_MobD PF04899.12 NODE_66284_length_241_cov_1.592233_g58343_i0reverse_frame_3 - 0.083 13.0 1.2 0.11 12.6 1.2 1.2 1 0 0 1 1 1 0 MbeD/MobD like DUF1980 PF09323.10 NODE_66284_length_241_cov_1.592233_g58343_i0forward_frame_3 - 1.8 8.5 6.6 2.6 7.9 6.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1980) TbpB_C PF17483.2 NODE_66283_length_241_cov_1.611650_g58342_i0reverse_frame_3 - 0.019 15.3 0.0 0.019 15.3 0.0 1.1 1 0 0 1 1 1 0 C-lobe handle domain of Tf-binding protein B RICTOR_M PF14666.6 NODE_66283_length_241_cov_1.611650_g58342_i0reverse_frame_2 - 0.038 13.8 0.1 0.043 13.6 0.1 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain gag_pre-integrs PF13976.6 NODE_66282_length_241_cov_1.616505_g58341_i0reverse_frame_3 - 0.051 13.5 3.0 0.07 13.0 3.0 1.4 1 1 0 1 1 1 0 GAG-pre-integrase domain Fer4_8 PF13183.6 NODE_66276_length_241_cov_1.718447_g58335_i0reverse_frame_3 - 0.0064 16.9 0.0 0.0064 16.9 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain NARP1 PF12569.8 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 2.8e-05 23.3 1.3 2.9e-05 23.2 1.3 1.0 1 0 0 1 1 1 1 NMDA receptor-regulated protein 1 ANAPC3 PF12895.7 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 5.8e-05 23.2 4.4 0.0026 18.0 0.3 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.00048 20.6 1.2 0.00048 20.6 1.2 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.00066 20.2 0.2 0.0084 16.7 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.0019 18.8 0.0 0.016 16.0 0.0 2.1 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.004 16.9 0.4 0.02 14.7 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.013 15.8 0.9 0.11 12.8 0.5 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat UPF0697 PF15117.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.013 15.6 1.5 0.013 15.5 0.8 1.4 1 1 0 1 1 1 0 Uncharacterised protein family UPF0697 TPR_11 PF13414.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.014 15.1 0.2 0.03 14.0 0.2 1.6 1 1 0 1 1 1 0 TPR repeat TPR_2 PF07719.17 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.033 14.3 3.0 0.042 14.0 0.0 2.5 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_20 PF14561.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.14 12.5 1.0 2.8 8.4 0.4 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.36 11.2 0.1 0.36 11.2 0.1 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_66274_length_241_cov_1.723301_g58333_i0forward_frame_3 - 0.61 10.6 3.8 0.7 10.4 0.4 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat Polyoma_agno PF01736.16 NODE_66271_length_241_cov_1.791262_g58330_i0reverse_frame_3 - 0.057 13.1 0.3 9.3 6.1 0.1 2.1 2 0 0 2 2 2 0 Polyomavirus agnoprotein Herpes_UL73 PF03554.13 NODE_66268_length_241_cov_1.805825_g58327_i0reverse_frame_2 - 0.043 13.8 0.0 0.065 13.2 0.0 1.3 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein DUF4749 PF15936.5 NODE_66268_length_241_cov_1.805825_g58327_i0forward_frame_3 - 0.051 14.7 0.1 0.062 14.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4749) Prolactin_RP PF15172.6 NODE_66264_length_241_cov_1.864078_g58323_i0reverse_frame_2 - 0.0062 16.1 0.4 0.011 15.3 0.1 1.6 2 0 0 2 2 2 1 Prolactin-releasing peptide DUF2521 PF10730.9 NODE_66263_length_241_cov_1.864078_g58322_i0reverse_frame_3 - 0.0052 16.8 0.0 0.0056 16.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2521) DUF986 PF06173.12 NODE_66262_length_241_cov_1.868932_g58321_i0forward_frame_3 - 0.019 15.1 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF986) TssO PF17561.2 NODE_66262_length_241_cov_1.868932_g58321_i0forward_frame_2 - 0.019 15.1 0.2 0.023 14.8 0.2 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO PRIMA1 PF16101.5 NODE_66260_length_241_cov_1.878641_g58319_i0forward_frame_3 - 0.094 12.7 4.6 0.1 12.7 4.6 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 bZIP_1 PF00170.21 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 9.3e-12 44.9 9.0 9.3e-12 44.9 9.0 1.4 1 1 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 7e-07 29.2 8.8 2.4e-06 27.5 8.9 1.9 1 1 0 1 1 1 1 Basic region leucine zipper HALZ PF02183.18 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.00092 19.4 3.9 0.0014 18.8 3.9 1.3 1 0 0 1 1 1 1 Homeobox associated leucine zipper DUF4200 PF13863.6 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.01 16.2 7.0 0.01 16.2 7.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) RasGAP_C PF03836.15 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.019 15.1 3.6 0.024 14.8 3.6 1.1 1 0 0 1 1 1 0 RasGAP C-terminus DivIC PF04977.15 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.031 14.0 3.4 0.049 13.4 3.4 1.4 1 0 0 1 1 1 0 Septum formation initiator Shugoshin_N PF07558.11 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.034 14.0 3.0 0.042 13.7 1.3 2.0 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region DUF3450 PF11932.8 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.037 13.3 3.0 0.038 13.3 3.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Herpes_BLRF2 PF05812.12 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.041 14.0 0.5 0.041 14.0 0.5 2.1 1 1 1 2 2 2 0 Herpesvirus BLRF2 protein TSC22 PF01166.18 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.046 14.0 0.3 0.092 13.1 0.3 1.6 1 0 0 1 1 1 0 TSC-22/dip/bun family bZIP_Maf PF03131.17 NODE_66257_length_241_cov_1.907767_g58316_i0reverse_frame_3 - 0.1 13.1 8.4 0.063 13.8 6.6 1.4 1 1 1 2 2 2 0 bZIP Maf transcription factor Glycophorin_A PF01102.18 NODE_66254_length_241_cov_1.927184_g58313_i0reverse_frame_2 - 3.1 8.1 5.4 14 6.0 3.1 2.0 1 1 1 2 2 2 0 Glycophorin A Paramyxo_C PF01692.18 NODE_66254_length_241_cov_1.927184_g58313_i0forward_frame_2 - 0.17 11.2 0.1 0.24 10.8 0.1 1.2 1 0 0 1 1 1 0 Paramyxovirus non-structural protein C MORN PF02493.20 NODE_66251_length_241_cov_1.970874_g58310_i0forward_frame_2 - 7.8e-17 60.1 15.7 4.5e-07 29.4 0.3 4.2 4 0 0 4 4 4 4 MORN repeat Ion_trans PF00520.31 NODE_66248_length_241_cov_1.985437_g58307_i0forward_frame_3 - 3.1e-05 23.3 3.5 3.6e-05 23.1 3.5 1.1 1 0 0 1 1 1 1 Ion transport protein zf-UDP PF14569.6 NODE_66246_length_241_cov_2.009709_g58305_i0reverse_frame_2 - 0.12 12.5 0.2 0.18 11.9 0.1 1.3 1 1 0 1 1 1 0 Zinc-binding RING-finger DUF3270 PF11674.8 NODE_66245_length_241_cov_2.014563_g58304_i0reverse_frame_3 - 0.14 12.3 3.7 0.17 12.1 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) CLZ PF16526.5 NODE_66245_length_241_cov_2.014563_g58304_i0forward_frame_3 - 0.05 14.0 0.8 0.084 13.2 0.1 1.7 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels PBP-Tp47_c PF14888.6 NODE_66243_length_241_cov_2.024272_g58302_i0reverse_frame_3 - 0.037 14.0 0.1 0.044 13.7 0.1 1.0 1 0 0 1 1 1 0 Penicillin-binding protein Tp47 domain C DUF674 PF05056.12 NODE_66243_length_241_cov_2.024272_g58302_i0forward_frame_2 - 4.7 6.0 5.5 5 5.9 5.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF674) Peptidase_M30 PF10460.9 NODE_66242_length_241_cov_2.043689_g58301_i0reverse_frame_3 - 0.11 11.4 0.6 0.14 11.1 0.6 1.0 1 0 0 1 1 1 0 Peptidase M30 DUF3759 PF12585.8 NODE_66238_length_241_cov_2.121359_g58297_i0reverse_frame_2 - 0.051 13.6 0.5 0.088 12.8 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3759) Tap-RNA_bind PF09162.10 NODE_66238_length_241_cov_2.121359_g58297_i0forward_frame_2 - 0.068 13.0 0.0 0.096 12.5 0.0 1.2 1 0 0 1 1 1 0 Tap, RNA-binding Ski_Sno PF02437.17 NODE_66237_length_241_cov_2.126214_g58296_i0reverse_frame_2 - 0.064 13.0 0.6 0.074 12.8 0.6 1.1 1 0 0 1 1 1 0 SKI/SNO/DAC family HECW_N PF16562.5 NODE_66237_length_241_cov_2.126214_g58296_i0forward_frame_3 - 0.011 15.5 0.7 0.015 15.1 0.7 1.2 1 0 0 1 1 1 0 N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2 HATPase_c PF02518.26 NODE_66236_length_241_cov_2.160194_g58295_i0forward_frame_3 - 0.00024 21.6 0.0 0.00036 21.0 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 NODE_66236_length_241_cov_2.160194_g58295_i0forward_frame_3 - 0.061 13.2 0.0 0.077 12.8 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ICMT PF04140.14 NODE_66232_length_241_cov_2.276699_g58291_i0reverse_frame_3 - 0.11 12.9 1.0 0.18 12.3 1.0 1.5 1 1 0 1 1 1 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF2500 PF10694.9 NODE_66230_length_241_cov_2.315534_g58289_i0forward_frame_3 - 0.044 14.3 0.7 0.056 14.0 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) DUF2371 PF10177.9 NODE_66224_length_241_cov_2.427184_g58283_i0reverse_frame_3 - 0.7 10.1 4.4 1.3 9.2 4.4 1.6 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) Aa_trans PF01490.18 NODE_66222_length_241_cov_2.446602_g58281_i0reverse_frame_2 - 5.5e-08 31.9 9.4 6.4e-08 31.7 9.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Sushi_2 PF09014.10 NODE_66222_length_241_cov_2.446602_g58281_i0reverse_frame_2 - 0.036 13.9 0.1 0.043 13.7 0.1 1.2 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain Mg296 PF09644.10 NODE_66219_length_241_cov_2.500000_g58278_i0forward_frame_3 - 0.054 13.6 0.8 0.066 13.4 0.8 1.2 1 0 0 1 1 1 0 Mg296 protein Toxin_11 PF07473.11 NODE_66213_length_241_cov_2.650485_g58272_i0reverse_frame_3 - 1 9.5 10.1 0.13 12.4 6.0 1.7 2 0 0 2 2 2 0 Spasmodic peptide gm9a; conotoxin from Conus species HlyD_2 PF12700.7 NODE_66213_length_241_cov_2.650485_g58272_i0reverse_frame_2 - 0.32 9.7 1.1 0.37 9.5 1.1 1.1 1 0 0 1 1 1 0 HlyD family secretion protein Tmemb_9 PF05434.11 NODE_66212_length_241_cov_2.679612_g58271_i0reverse_frame_2 - 0.039 13.8 0.3 0.044 13.7 0.3 1.1 1 0 0 1 1 1 0 TMEM9 Avl9 PF09794.9 NODE_66210_length_241_cov_2.728155_g58269_i0reverse_frame_3 - 0.091 11.4 0.5 0.1 11.3 0.5 1.0 1 0 0 1 1 1 0 Transport protein Avl9 Adipogenin PF15202.6 NODE_66210_length_241_cov_2.728155_g58269_i0reverse_frame_2 - 0.068 13.2 1.4 0.091 12.8 1.4 1.2 1 0 0 1 1 1 0 Adipogenin Phtf-FEM1B_bdg PF12129.8 NODE_66210_length_241_cov_2.728155_g58269_i0forward_frame_2 - 1.5 8.6 0.0 1.5 8.6 0.0 2.0 1 1 1 2 2 2 0 Male germ-cell putative homeodomain transcription factor VHL PF01847.16 NODE_66208_length_241_cov_2.737864_g58267_i0forward_frame_3 - 0.028 14.3 0.3 0.036 14.0 0.3 1.1 1 0 0 1 1 1 0 VHL beta domain Rad51 PF08423.11 NODE_66207_length_241_cov_2.742718_g58266_i0forward_frame_3 - 0.11 11.7 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Rad51 MukE PF04288.13 NODE_66207_length_241_cov_2.742718_g58266_i0forward_frame_2 - 3.5e-11 42.5 0.2 4.2e-11 42.2 0.2 1.1 1 0 0 1 1 1 1 MukE-like family Luteo_Vpg PF01659.16 NODE_66202_length_241_cov_2.878641_g58261_i0forward_frame_3 - 0.063 13.6 0.1 0.077 13.3 0.1 1.2 1 0 0 1 1 1 0 Luteovirus putative VPg genome linked protein Fis1_TPR_C PF14853.6 NODE_66199_length_241_cov_2.961165_g58258_i0reverse_frame_2 - 0.02 14.9 0.1 0.027 14.5 0.1 1.3 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat GAT PF03127.14 NODE_66199_length_241_cov_2.961165_g58258_i0reverse_frame_2 - 0.1 12.9 0.1 0.18 12.2 0.1 1.4 1 0 0 1 1 1 0 GAT domain DUF3657 PF12394.8 NODE_66199_length_241_cov_2.961165_g58258_i0forward_frame_3 - 0.079 13.5 1.0 0.1 13.1 1.0 1.2 1 0 0 1 1 1 0 Protein FAM135 DUF2207 PF09972.9 NODE_66196_length_241_cov_3.121359_g58255_i0reverse_frame_2 - 0.02 13.7 0.0 0.021 13.6 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5305 PF17231.2 NODE_66196_length_241_cov_3.121359_g58255_i0reverse_frame_2 - 0.022 14.1 0.0 0.025 14.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) SYS1 PF09801.9 NODE_66196_length_241_cov_3.121359_g58255_i0reverse_frame_2 - 0.057 13.6 0.0 0.058 13.5 0.0 1.2 1 0 0 1 1 1 0 Integral membrane protein S linking to the trans Golgi network Saf_2TM PF18303.1 NODE_66196_length_241_cov_3.121359_g58255_i0reverse_frame_2 - 0.083 12.5 0.0 0.092 12.3 0.0 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain TraC PF07820.12 NODE_66195_length_241_cov_3.310680_g58254_i0forward_frame_2 - 0.0021 18.3 0.2 0.0033 17.7 0.1 1.4 1 1 0 1 1 1 1 TraC-like protein DUF35_N PF12172.8 NODE_66191_length_241_cov_3.854369_g58250_i0forward_frame_3 - 0.064 13.1 0.7 2.3 8.2 0.1 2.7 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Pox_F17 PF04767.12 NODE_66189_length_241_cov_5.043689_g58248_i0forward_frame_2 - 0.053 14.0 0.1 0.066 13.7 0.1 1.1 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein PGA2 PF07543.12 NODE_66184_length_241_cov_31.174757_g58243_i0forward_frame_2 - 0.26 11.3 0.9 0.43 10.6 0.9 1.3 1 0 0 1 1 1 0 Protein trafficking PGA2 Yae1_N PF09811.9 NODE_66183_length_241_cov_31.567961_g58242_i0reverse_frame_2 - 0.063 13.0 5.1 0.23 11.2 5.1 2.0 1 1 0 1 1 1 0 Essential protein Yae1, N terminal TMEM223 PF14640.6 NODE_66178_length_241_cov_35.475728_g58237_i0reverse_frame_3 - 0.042 14.0 0.7 0.05 13.8 0.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 223 Herpes_BMRF2 PF04633.12 NODE_66177_length_241_cov_40.199029_g58236_i0forward_frame_2 - 0.011 15.0 4.1 0.013 14.8 4.1 1.0 1 0 0 1 1 1 0 Herpesvirus BMRF2 protein TMEM154 PF15102.6 NODE_66177_length_241_cov_40.199029_g58236_i0forward_frame_2 - 0.13 12.2 0.9 0.13 12.2 0.9 1.6 2 0 0 2 2 2 0 TMEM154 protein family TauD PF02668.16 NODE_66175_length_241_cov_47.495146_g58234_i0forward_frame_3 - 0.021 14.6 0.9 0.028 14.2 0.9 1.1 1 0 0 1 1 1 0 Taurine catabolism dioxygenase TauD, TfdA family DUF5008 PF16400.5 NODE_66174_length_241_cov_47.529126_g58233_i0reverse_frame_3 - 0.029 14.4 0.1 0.032 14.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5008) Pkinase PF00069.25 NODE_66174_length_241_cov_47.529126_g58233_i0reverse_frame_3 - 0.041 13.2 0.1 0.059 12.7 0.1 1.3 1 0 0 1 1 1 0 Protein kinase domain Whi5 PF08528.11 NODE_66169_length_241_cov_54.203883_g58228_i0forward_frame_3 - 9.4 6.0 7.6 9.8 5.9 1.1 2.2 2 0 0 2 2 2 0 Whi5 like DUF5551 PF17705.1 NODE_66166_length_241_cov_55.839806_g58225_i0forward_frame_3 - 0.13 11.9 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5551) zf_C2H2_10 PF18414.1 NODE_66162_length_241_cov_64.058252_g58221_i0reverse_frame_2 - 0.025 14.1 0.1 0.044 13.3 0.1 1.3 1 0 0 1 1 1 0 C2H2 type zinc-finger DUF4305 PF14146.6 NODE_66159_length_241_cov_66.660194_g58218_i0reverse_frame_3 - 0.18 12.0 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4305) CaMBD PF02888.16 NODE_66158_length_241_cov_67.922330_g58217_i0forward_frame_3 - 0.026 14.7 0.0 0.031 14.5 0.0 1.2 1 0 0 1 1 1 0 Calmodulin binding domain Pep1_7 PF17232.2 NODE_66157_length_241_cov_72.699029_g58216_i0reverse_frame_2 - 1.6 9.2 10.9 6.1 7.4 10.8 1.9 1 1 0 1 1 1 0 Elicitor peptide 1-7 PGA2 PF07543.12 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 0.31 11.0 13.6 0.41 10.6 13.6 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 CCDC106 PF15794.5 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 0.33 10.6 15.7 0.39 10.4 15.7 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 YL1 PF05764.13 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 2.3 8.3 27.4 2.7 8.1 27.4 1.0 1 0 0 1 1 1 0 YL1 nuclear protein BUD22 PF09073.10 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 2.7 7.2 29.1 3 7.1 29.1 1.0 1 0 0 1 1 1 0 BUD22 Cwf_Cwc_15 PF04889.12 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 4.7 6.9 26.9 6.5 6.4 26.9 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein CDC45 PF02724.14 NODE_66157_length_241_cov_72.699029_g58216_i0forward_frame_2 - 6.9 4.8 24.1 7.2 4.8 24.1 1.0 1 0 0 1 1 1 0 CDC45-like protein Pepdidase_M14_N PF18027.1 NODE_66155_length_241_cov_73.951456_g58214_i0reverse_frame_3 - 0.05 14.0 0.0 0.05 14.0 0.0 1.2 1 0 0 1 1 1 0 Cytosolic carboxypeptidase N-terminal domain gpUL132 PF11359.8 NODE_66153_length_241_cov_81.053398_g58212_i0reverse_frame_2 - 1.1 8.8 2.4 1.2 8.6 2.4 1.1 1 0 0 1 1 1 0 Glycoprotein UL132 YgbA_NO PF11756.8 NODE_66153_length_241_cov_81.053398_g58212_i0forward_frame_2 - 0.042 14.2 6.5 0.054 13.9 6.4 1.4 1 1 0 1 1 1 0 Nitrous oxide-stimulated promoter Siva PF05458.12 NODE_66152_length_241_cov_85.645631_g58211_i0forward_frame_2 - 0.059 13.1 2.9 0.064 12.9 2.9 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) DUF5415 PF17436.2 NODE_66150_length_241_cov_91.830097_g58209_i0forward_frame_2 - 0.048 13.7 0.0 0.059 13.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5415) Fer4_2 PF12797.7 NODE_66146_length_241_cov_100.223301_g58205_i0reverse_frame_2 - 0.25 11.5 1.1 0.25 11.5 1.1 2.6 3 0 0 3 3 3 0 4Fe-4S binding domain Rhodanese_C PF12368.8 NODE_66146_length_241_cov_100.223301_g58205_i0reverse_frame_2 - 3.2 8.2 12.1 51 4.3 11.6 2.1 1 1 1 2 2 2 0 Rhodanase C-terminal Pombe_5TM PF09437.10 NODE_66143_length_241_cov_115.203883_g58202_i0forward_frame_3 - 0.17 11.5 7.9 0.18 11.4 7.9 1.0 1 0 0 1 1 1 0 Pombe specific 5TM protein FLYWCH PF04500.16 NODE_66141_length_241_cov_130.538835_g58200_i0reverse_frame_2 - 0.011 15.8 0.5 0.018 15.2 0.5 1.4 1 0 0 1 1 1 0 FLYWCH zinc finger domain Ank_4 PF13637.6 NODE_66138_length_241_cov_144.199029_g58197_i0reverse_frame_3 - 0.023 15.2 0.0 0.03 14.9 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 NODE_66138_length_241_cov_144.199029_g58197_i0reverse_frame_3 - 0.025 15.0 0.2 2.2 8.9 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat RyR PF02026.16 NODE_66134_length_241_cov_181.524272_g58193_i0forward_frame_2 - 0.0055 16.9 0.4 0.0068 16.6 0.4 1.1 1 0 0 1 1 1 1 RyR domain G-patch_2 PF12656.7 NODE_66132_length_241_cov_200.325243_g58191_i0reverse_frame_3 - 0.11 12.6 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 G-patch domain CotJA PF11007.8 NODE_66132_length_241_cov_200.325243_g58191_i0forward_frame_2 - 0.0037 17.1 0.0 0.0057 16.4 0.0 1.3 1 0 0 1 1 1 1 Spore coat associated protein JA (CotJA) DUF4752 PF15944.5 NODE_66130_length_241_cov_309.033981_g58189_i0forward_frame_3 - 7.2 6.7 5.7 0.82 9.8 0.3 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4752) CD45 PF12567.8 NODE_66129_length_241_cov_354.873786_g58188_i0reverse_frame_2 - 0.22 11.5 4.2 0.17 11.9 2.4 1.8 1 1 0 1 1 1 0 Leukocyte receptor CD45 DUF4668 PF15701.5 NODE_66126_length_241_cov_603.504854_g58185_i0forward_frame_3 - 0.038 13.8 2.0 0.045 13.6 2.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) CFTR_R PF14396.6 NODE_66125_length_241_cov_770.174757_g58184_i0reverse_frame_2 - 0.029 14.0 0.1 0.033 13.8 0.1 1.0 1 0 0 1 1 1 0 Cystic fibrosis TM conductance regulator (CFTR), regulator domain DUF5542 PF17696.1 NODE_66123_length_242_cov_0.772947_g58182_i0reverse_frame_3 - 0.074 13.2 1.8 0.12 12.6 1.8 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5542) Adeno_E4_ORF3 PF06931.11 NODE_66122_length_242_cov_0.772947_g58181_i0forward_frame_3 - 0.069 13.4 0.1 0.082 13.1 0.1 1.1 1 0 0 1 1 1 0 Mastadenovirus E4 ORF3 protein Shal-type PF11601.8 NODE_66121_length_242_cov_0.772947_g58180_i0forward_frame_3 - 0.099 12.2 0.0 0.24 11.0 0.0 1.6 1 0 0 1 1 1 0 Shal-type voltage-gated potassium channels, N-terminal zf-Paramyx-P PF13008.7 NODE_66119_length_242_cov_0.830918_g58178_i0reverse_frame_3 - 0.018 14.5 1.5 1.3 8.6 0.2 2.2 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein HrpB1_HrpK PF09613.10 NODE_66119_length_242_cov_0.830918_g58178_i0reverse_frame_3 - 0.1 12.2 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB1_HrpK) S4 PF01479.25 NODE_66119_length_242_cov_0.830918_g58178_i0forward_frame_2 - 1 9.1 3.8 25 4.7 0.0 3.1 3 0 0 3 3 3 0 S4 domain MLVIN_C PF18697.1 NODE_66117_length_242_cov_0.961353_g58176_i0forward_frame_2 - 0.032 14.3 0.0 0.041 14.0 0.0 1.1 1 0 0 1 1 1 0 Murine leukemia virus (MLV) integrase (IN) C-terminal domain RsmF_methylt_CI PF17126.5 NODE_66114_length_242_cov_1.014493_g58173_i0forward_frame_3 - 0.086 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 RsmF rRNA methyltransferase first C-terminal domain Cucumopine_C PF18631.1 NODE_66113_length_242_cov_1.014493_g58172_i0forward_frame_2 - 0.014 15.3 0.0 0.017 15.1 0.0 1.1 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain RPW8 PF05659.11 NODE_66113_length_242_cov_1.014493_g58172_i0forward_frame_2 - 0.027 14.1 0.7 0.032 13.9 0.7 1.2 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 YaeQ PF07152.12 NODE_66103_length_242_cov_1.154589_g58162_i0forward_frame_3 - 0.094 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 YaeQ protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks335.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks335.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks335.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks335.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- L27_1 PF09058.10 NODE_66098_length_242_cov_1.159420_g58157_i0forward_frame_2 - 0.064 13.2 0.6 0.11 12.5 0.6 1.3 1 0 0 1 1 1 0 L27_1 NBD_C PF17042.5 NODE_66097_length_242_cov_1.159420_g58156_i0forward_frame_3 - 0.051 14.1 0.2 0.051 14.1 0.2 1.1 1 0 0 1 1 1 0 Nucleotide-binding C-terminal domain Spheroidin PF05541.12 NODE_66097_length_242_cov_1.159420_g58156_i0forward_frame_2 - 1.8 6.3 2.7 1.8 6.3 2.7 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein RhodobacterPufX PF11511.8 NODE_66096_length_242_cov_1.159420_g58155_i0reverse_frame_3 - 0.053 13.1 3.1 0.079 12.6 3.1 1.2 1 0 0 1 1 1 0 Intrinsic membrane protein PufX Amnionless PF14828.6 NODE_66096_length_242_cov_1.159420_g58155_i0reverse_frame_3 - 0.14 11.0 0.1 0.15 10.8 0.1 1.0 1 0 0 1 1 1 0 Amnionless NicO PF03824.16 NODE_66096_length_242_cov_1.159420_g58155_i0forward_frame_3 - 0.1 11.9 0.2 0.11 11.8 0.2 1.0 1 0 0 1 1 1 0 High-affinity nickel-transport protein SSP160 PF06933.11 NODE_66096_length_242_cov_1.159420_g58155_i0forward_frame_2 - 0.69 8.0 8.7 0.72 8.0 8.7 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 ELP6 PF09807.9 NODE_66093_length_242_cov_1.198068_g58152_i0reverse_frame_2 - 0.015 14.7 1.2 0.016 14.6 1.2 1.0 1 0 0 1 1 1 0 Elongation complex protein 6 TPR_1 PF00515.28 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 7.9e-18 63.5 5.4 4.6e-11 42.1 0.4 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 2.7e-16 58.3 2.7 9.4e-09 34.7 0.1 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 6.9e-14 50.8 2.5 3e-09 36.3 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 1.1e-12 48.1 0.9 2.3e-12 47.0 1.0 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 7e-12 44.5 0.1 6.7e-07 28.9 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 2.2e-08 34.2 0.2 8.9e-05 22.9 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 8.5e-08 31.8 0.4 0.00034 20.4 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 2.1e-06 28.2 0.0 2.6e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 1.1e-05 25.9 0.0 0.0084 16.8 0.0 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 2.7e-05 23.8 4.2 0.0035 17.0 0.3 2.8 1 1 2 3 3 3 2 TPR repeat TPR_17 PF13431.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 2.8e-05 24.2 1.1 0.65 10.5 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 5.4e-05 23.8 0.0 0.083 13.6 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 9e-05 22.6 4.2 0.018 15.3 0.3 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.00038 20.5 1.2 0.0069 16.4 0.1 2.2 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat SPO22 PF08631.10 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.001 18.7 0.7 0.2 11.1 0.1 2.0 1 1 1 2 2 2 2 Meiosis protein SPO22/ZIP4 like SNAP PF14938.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.003 17.0 0.9 0.0033 16.9 0.9 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP MIT PF04212.18 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.0039 17.2 2.4 0.15 12.2 0.2 2.1 2 0 0 2 2 2 1 MIT (microtubule interacting and transport) domain TPR_15 PF13429.6 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.019 14.2 0.0 0.023 13.9 0.0 1.0 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF3808 PF10300.9 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.02 13.7 0.5 0.025 13.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3808) Sel1 PF08238.12 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.069 13.9 1.0 1.5 9.6 0.1 2.2 2 0 0 2 2 2 0 Sel1 repeat TPR_3 PF07720.12 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 0.071 13.1 3.8 0.89 9.6 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat NSF PF02071.20 NODE_66087_length_242_cov_1.323671_g58146_i0reverse_frame_3 - 2.3 9.3 5.7 15 6.9 0.3 3.4 3 1 1 4 4 3 0 Aromatic-di-Alanine (AdAR) repeat R3H PF01424.22 NODE_66087_length_242_cov_1.323671_g58146_i0forward_frame_3 - 0.0054 16.7 0.3 0.12 12.4 0.2 2.1 2 0 0 2 2 2 2 R3H domain DUF684 PF05075.14 NODE_66085_length_242_cov_1.333333_g58144_i0reverse_frame_3 - 0.036 13.1 3.4 0.034 13.2 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF684) HR1 PF02185.16 NODE_66085_length_242_cov_1.333333_g58144_i0reverse_frame_3 - 0.051 13.7 0.1 0.066 13.3 0.1 1.2 1 0 0 1 1 1 0 Hr1 repeat WD40 PF00400.32 NODE_66081_length_242_cov_1.376812_g58140_i0reverse_frame_2 - 1.4e-05 25.8 0.9 0.0033 18.2 0.0 3.0 3 0 0 3 3 3 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_66081_length_242_cov_1.376812_g58140_i0reverse_frame_2 - 0.025 14.9 0.1 0.026 14.8 0.1 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain DUF2165 PF09933.9 NODE_66079_length_242_cov_1.463768_g58138_i0reverse_frame_3 - 0.099 12.7 0.2 0.13 12.3 0.2 1.1 1 0 0 1 1 1 0 Predicted small integral membrane protein (DUF2165) DUF4603 PF15376.6 NODE_66078_length_242_cov_1.473430_g58137_i0reverse_frame_3 - 0.23 8.8 0.8 0.26 8.6 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) MASE5 PF17178.4 NODE_66077_length_242_cov_1.478261_g58136_i0reverse_frame_2 - 0.0079 16.0 0.3 0.009 15.9 0.3 1.0 1 0 0 1 1 1 1 Membrane-associated sensor SAC3_GANP PF03399.16 NODE_66077_length_242_cov_1.478261_g58136_i0forward_frame_3 - 0.053 12.9 0.2 0.059 12.8 0.2 1.0 1 0 0 1 1 1 0 SAC3/GANP family DUF3974 PF13120.6 NODE_66074_length_242_cov_1.492754_g58133_i0forward_frame_3 - 0.04 14.0 0.3 0.049 13.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) Urb2 PF10441.9 NODE_66074_length_242_cov_1.492754_g58133_i0forward_frame_2 - 0.15 11.9 1.9 0.15 12.0 1.9 1.1 1 0 0 1 1 1 0 Urb2/Npa2 family LRR_3 PF07725.12 NODE_66074_length_242_cov_1.492754_g58133_i0forward_frame_2 - 2.9 7.9 5.2 1.6 8.7 0.5 2.5 2 0 0 2 2 2 0 Leucine Rich Repeat COX6A PF02046.15 NODE_66071_length_242_cov_1.507246_g58130_i0forward_frame_2 - 0.047 14.2 0.0 0.054 14.0 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa RP-C_C PF11800.8 NODE_66068_length_242_cov_1.516908_g58127_i0reverse_frame_3 - 0.13 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region DUF4801 PF16059.5 NODE_66067_length_242_cov_1.536232_g58126_i0forward_frame_2 - 0.19 11.7 5.8 0.35 10.9 5.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4801) Ppx-GppA PF02541.16 NODE_66065_length_242_cov_1.541063_g58124_i0reverse_frame_2 - 6.5e-08 32.3 0.0 6.8e-08 32.3 0.0 1.0 1 0 0 1 1 1 1 Ppx/GppA phosphatase family Corona_S2 PF01601.16 NODE_66064_length_242_cov_1.545894_g58123_i0reverse_frame_2 - 0.0045 15.5 0.1 0.0045 15.5 0.1 1.1 1 0 0 1 1 1 1 Coronavirus S2 glycoprotein EcoR124_C PF12008.8 NODE_66064_length_242_cov_1.545894_g58123_i0reverse_frame_2 - 0.021 14.5 0.1 0.026 14.2 0.1 1.0 1 0 0 1 1 1 0 Type I restriction and modification enzyme - subunit R C terminal DUF1192 PF06698.11 NODE_66064_length_242_cov_1.545894_g58123_i0reverse_frame_2 - 0.062 13.4 0.2 0.083 13.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) zf-Tim10_DDP PF02953.15 NODE_66063_length_242_cov_1.545894_g58122_i0reverse_frame_3 - 0.038 13.7 0.7 0.056 13.1 0.7 1.3 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Sec-ASP3 PF15432.6 NODE_66063_length_242_cov_1.545894_g58122_i0reverse_frame_3 - 0.11 12.7 0.2 0.13 12.5 0.2 1.0 1 0 0 1 1 1 0 Accessory Sec secretory system ASP3 FecCD PF01032.18 NODE_66062_length_242_cov_1.550725_g58121_i0reverse_frame_2 - 1.2e-24 87.0 0.9 1.2e-24 86.9 0.9 1.0 1 0 0 1 1 1 1 FecCD transport family ChaC PF04752.12 NODE_66062_length_242_cov_1.550725_g58121_i0forward_frame_3 - 0.17 11.9 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 ChaC-like protein RecO_C PF02565.15 NODE_66058_length_242_cov_1.613527_g58117_i0reverse_frame_3 - 0.0057 16.5 3.2 0.048 13.5 0.3 2.0 1 1 1 2 2 2 2 Recombination protein O C terminal YebO PF13974.6 NODE_66058_length_242_cov_1.613527_g58117_i0reverse_frame_2 - 0.0043 17.1 1.1 0.0057 16.7 1.1 1.2 1 0 0 1 1 1 1 YebO-like protein DAP10 PF07213.11 NODE_66058_length_242_cov_1.613527_g58117_i0forward_frame_3 - 0.12 12.4 4.3 0.15 12.1 4.3 1.2 1 0 0 1 1 1 0 DAP10 membrane protein Keratin_B2_2 PF13885.6 NODE_66058_length_242_cov_1.613527_g58117_i0forward_frame_3 - 0.65 10.0 23.5 0.068 13.1 14.1 2.1 1 1 1 2 2 2 0 Keratin, high sulfur B2 protein DJ-1_PfpI PF01965.24 NODE_66055_length_242_cov_1.676329_g58114_i0forward_frame_3 - 0.19 11.5 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 DJ-1/PfpI family ASFV_L11L PF05293.11 NODE_66053_length_242_cov_1.695652_g58112_i0reverse_frame_2 - 0.0082 16.5 1.2 0.0096 16.2 1.2 1.2 1 0 0 1 1 1 1 African swine fever virus (ASFV) L11L protein SMC_N PF02463.19 NODE_66051_length_242_cov_1.705314_g58110_i0reverse_frame_2 - 0.0015 18.0 0.1 0.0017 17.9 0.1 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain RabGAP-TBC PF00566.18 NODE_66050_length_242_cov_1.724638_g58109_i0forward_frame_3 - 2.8e-08 33.7 0.4 2.9e-08 33.6 0.4 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain FixS PF03597.15 NODE_66049_length_242_cov_1.729469_g58108_i0forward_frame_3 - 0.5 10.1 1.9 0.73 9.6 1.9 1.2 1 0 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type Lir1 PF07207.11 NODE_66048_length_242_cov_1.739130_g58107_i0forward_frame_3 - 0.078 13.2 0.0 0.086 13.1 0.0 1.3 1 0 0 1 1 1 0 Light regulated protein Lir1 DNA_photolyase PF00875.18 NODE_66046_length_242_cov_1.787440_g58105_i0reverse_frame_2 - 1.2e-09 38.4 0.3 1.6e-09 38.0 0.3 1.2 1 0 0 1 1 1 1 DNA photolyase Ribosomal_S27 PF01599.19 NODE_66044_length_242_cov_1.821256_g58103_i0forward_frame_3 - 0.078 13.1 1.2 0.16 12.2 1.2 1.4 1 0 0 1 1 1 0 Ribosomal protein S27a MA3 PF02847.17 NODE_66042_length_242_cov_1.850242_g58101_i0reverse_frame_3 - 0.083 12.9 0.3 0.12 12.4 0.3 1.4 1 1 0 1 1 1 0 MA3 domain IL3Ra_N PF18611.1 NODE_66041_length_242_cov_1.850242_g58100_i0forward_frame_3 - 0.13 12.3 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain NACHT_sigma PF17106.5 NODE_66040_length_242_cov_1.864734_g58099_i0forward_frame_3 - 0.11 12.7 0.4 0.18 12.0 0.4 1.2 1 0 0 1 1 1 0 Sigma domain on NACHT-NTPases Fer4_9 PF13187.6 NODE_66040_length_242_cov_1.864734_g58099_i0forward_frame_3 - 0.21 11.8 11.5 0.35 11.1 11.5 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain FlhE PF06366.13 NODE_66038_length_242_cov_1.908213_g58097_i0forward_frame_2 - 0.091 12.8 0.2 0.51 10.4 0.2 1.9 1 1 1 2 2 2 0 Flagellar protein FlhE SBP_bac_8 PF13416.6 NODE_66037_length_242_cov_1.922705_g58096_i0forward_frame_3 - 2.3e-08 34.2 0.0 2.5e-08 34.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 NODE_66037_length_242_cov_1.922705_g58096_i0forward_frame_3 - 3.6e-08 33.7 0.1 3.8e-08 33.6 0.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein LPP PF04728.13 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 8.1e-25 87.0 9.9 9.6e-25 86.7 9.9 1.1 1 0 0 1 1 1 1 Lipoprotein leucine-zipper Alanine_zipper PF11839.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.00012 22.4 9.0 0.00024 21.4 7.5 2.0 1 1 0 1 1 1 1 Alanine-zipper, major outer membrane lipoprotein JIP_LZII PF16471.5 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.00013 22.1 0.2 0.0012 19.0 0.1 1.9 1 1 1 2 2 2 1 JNK-interacting protein leucine zipper II EzrA PF06160.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.00091 17.5 0.4 0.001 17.4 0.4 1.0 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA TMF_DNA_bd PF12329.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0025 17.8 0.4 0.0031 17.5 0.4 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding DUF1664 PF07889.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0028 17.7 0.5 0.0033 17.4 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF4763 PF15960.5 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0042 16.4 1.7 0.0058 16.0 1.7 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4763) DUF948 PF06103.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0044 17.2 0.9 0.0054 17.0 0.9 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) TPR_MLP1_2 PF07926.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0046 17.0 0.6 0.0057 16.7 0.6 1.2 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein ADIP PF11559.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0049 17.0 1.8 0.0065 16.6 1.8 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding YscO PF07321.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0054 16.7 0.7 0.0059 16.6 0.7 1.0 1 0 0 1 1 1 1 Type III secretion protein YscO ZapB PF06005.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0055 17.1 0.2 0.0067 16.8 0.2 1.1 1 0 0 1 1 1 1 Cell division protein ZapB Tropomyosin_1 PF12718.7 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0068 16.6 0.7 0.0083 16.3 0.7 1.1 1 0 0 1 1 1 1 Tropomyosin like CLZ PF16526.5 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0074 16.6 0.5 0.36 11.2 0.1 2.0 1 1 1 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Cluap1 PF10234.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.0095 15.4 1.5 0.012 15.1 1.5 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 EspB_PE PF18625.1 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.012 16.0 1.0 0.016 15.7 1.0 1.2 1 0 0 1 1 1 0 ESX-1 secreted protein B PE domain NPV_P10 PF05531.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.013 16.0 2.0 0.018 15.5 2.0 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF16 PF01519.16 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.013 15.9 0.9 0.022 15.2 0.9 1.3 1 1 0 1 1 1 0 Protein of unknown function DUF16 DivIC PF04977.15 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.017 14.8 0.6 0.024 14.4 0.6 1.3 1 0 0 1 1 1 0 Septum formation initiator TraF_2 PF13729.6 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.018 14.4 0.8 0.02 14.3 0.8 1.0 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein COG6 PF06419.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.019 13.2 1.1 0.022 13.0 1.1 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 Filament PF00038.21 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.023 14.3 0.2 0.025 14.2 0.2 1.0 1 0 0 1 1 1 0 Intermediate filament protein XhlA PF10779.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.024 14.9 2.0 0.13 12.4 2.0 1.9 1 1 0 1 1 1 0 Haemolysin XhlA Jnk-SapK_ap_N PF09744.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.024 14.9 0.3 0.028 14.6 0.3 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 GrpE PF01025.19 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.025 14.2 0.4 0.029 14.0 0.4 1.1 1 0 0 1 1 1 0 GrpE Fusion_gly PF00523.18 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.027 12.7 0.1 0.03 12.6 0.1 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0 DUF3584 PF12128.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.027 12.0 1.1 0.031 11.8 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Tropomyosin PF00261.20 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.033 13.6 0.3 0.038 13.4 0.3 1.0 1 0 0 1 1 1 0 Tropomyosin Spc7 PF08317.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.035 13.0 0.2 0.037 12.9 0.2 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein COG2 PF06148.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.038 14.1 0.2 0.045 13.9 0.2 1.1 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Rab5-bind PF09311.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.039 13.3 0.3 0.045 13.2 0.3 1.0 1 0 0 1 1 1 0 Rabaptin-like protein TolA_bind_tri PF16331.5 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.04 14.0 0.4 0.062 13.4 0.4 1.3 1 0 0 1 1 1 0 TolA binding protein trimerisation Med4 PF10018.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.04 13.6 0.5 0.05 13.3 0.5 1.0 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 COG7 PF10191.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.041 12.1 0.4 0.045 12.0 0.4 1.0 1 0 0 1 1 1 0 Golgi complex component 7 (COG7) Atg14 PF10186.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.043 12.9 0.7 0.05 12.7 0.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 AIP3 PF03915.13 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.043 12.9 0.5 0.045 12.8 0.5 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 HAP1_N PF04849.13 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.047 12.9 0.1 0.051 12.8 0.1 1.0 1 0 0 1 1 1 0 HAP1 N-terminal conserved region DUF3138 PF11336.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.049 12.2 0.3 0.051 12.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) DLP_helical PF18709.1 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.049 12.8 0.7 0.057 12.6 0.7 1.0 1 0 0 1 1 1 0 Dynamin-like helical domain FlaC_arch PF05377.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.053 13.9 0.2 0.075 13.4 0.2 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF4407 PF14362.6 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.054 12.8 1.0 0.061 12.7 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) COG5 PF10392.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.058 13.6 0.2 0.069 13.3 0.2 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 CENP-F_leu_zip PF10473.9 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.065 13.3 0.1 0.08 13.0 0.1 1.1 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 MbeD_MobD PF04899.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.068 13.3 0.6 0.12 12.5 0.4 1.6 1 1 0 1 1 1 0 MbeD/MobD like AKNA PF12443.8 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.078 13.6 0.1 0.095 13.4 0.1 1.2 1 0 0 1 1 1 0 AT-hook-containing transcription factor SlyX PF04102.12 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.14 12.8 1.4 0.21 12.2 1.4 1.3 1 1 0 1 1 1 0 SlyX Surfac_D-trimer PF09006.11 NODE_66032_length_242_cov_2.091787_g58091_i0reverse_frame_2 - 0.2 11.6 0.4 2.4 8.1 0.1 2.2 1 1 1 2 2 2 0 Lung surfactant protein D coiled-coil trimerisation CoA_binding_3 PF13727.6 NODE_66031_length_242_cov_2.096618_g58090_i0reverse_frame_3 - 0.02 15.0 0.5 0.023 14.7 0.5 1.0 1 0 0 1 1 1 0 CoA-binding domain Phage_Gp15 PF06854.11 NODE_66031_length_242_cov_2.096618_g58090_i0reverse_frame_2 - 0.15 12.1 0.6 0.17 11.9 0.6 1.0 1 0 0 1 1 1 0 Bacteriophage Gp15 protein hnRNP_Q_AcD PF18360.1 NODE_66026_length_242_cov_2.202899_g58085_i0reverse_frame_2 - 0.084 12.9 0.3 0.55 10.2 0.0 2.0 1 1 1 2 2 2 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain DUF2613 PF11021.8 NODE_66025_length_242_cov_2.217391_g58084_i0forward_frame_3 - 0.13 12.4 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) MPDZ_u10 PF16667.5 NODE_66022_length_242_cov_2.270531_g58081_i0reverse_frame_3 - 9 7.3 9.3 7.2 7.6 3.0 2.1 1 1 1 2 2 2 0 Unstructured region 10 on multiple PDZ protein TrbC_Ftype PF09673.10 NODE_66019_length_242_cov_2.420290_g58078_i0reverse_frame_3 - 0.11 12.5 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein GnRH PF00446.17 NODE_66017_length_242_cov_2.531401_g58076_i0forward_frame_3 - 0.34 11.4 0.9 0.34 11.4 0.9 2.2 3 0 0 3 3 3 0 Gonadotropin-releasing hormone Kelch_1 PF01344.25 NODE_66013_length_242_cov_2.632850_g58072_i0reverse_frame_3 - 0.023 14.3 0.0 0.25 11.0 0.0 2.1 2 0 0 2 2 2 0 Kelch motif QLQ PF08880.11 NODE_66013_length_242_cov_2.632850_g58072_i0forward_frame_3 - 0.042 13.6 0.1 0.063 13.0 0.1 1.3 1 0 0 1 1 1 0 QLQ VraX PF17412.2 NODE_66012_length_242_cov_2.734300_g58071_i0forward_frame_2 - 0.026 14.2 0.1 0.041 13.5 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function Histone PF00125.24 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 2.2e-07 31.3 0.0 2.9e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 1.6e-06 28.1 0.0 1.8e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 0.00032 21.0 0.0 0.00039 20.8 0.0 1.2 1 0 0 1 1 1 1 CENP-S protein Bromo_TP PF07524.13 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 0.0048 16.9 0.1 0.008 16.2 0.1 1.4 1 1 0 1 1 1 1 Bromodomain associated CBFD_NFYB_HMF PF00808.23 NODE_66011_length_242_cov_2.763285_g58070_i0forward_frame_2 - 0.016 15.5 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Claudin_3 PF06653.11 NODE_66008_length_242_cov_2.869565_g58067_i0forward_frame_2 - 0.00021 21.3 2.0 0.00021 21.3 2.0 1.1 1 0 0 1 1 1 1 Tight junction protein, Claudin-like ABC_tran PF00005.27 NODE_66007_length_242_cov_2.888889_g58066_i0forward_frame_3 - 0.011 16.3 0.0 0.012 16.1 0.0 1.0 1 0 0 1 1 1 0 ABC transporter GSH_synthase PF03199.15 NODE_66004_length_242_cov_3.086957_g58063_i0forward_frame_2 - 3.2e-17 62.9 0.0 4.4e-17 62.4 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase GSH_synth_ATP PF03917.17 NODE_66004_length_242_cov_3.086957_g58063_i0forward_frame_2 - 0.014 14.2 0.0 0.014 14.2 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic glutathione synthase, ATP binding domain CART PF06373.11 NODE_66003_length_242_cov_3.125604_g58062_i0reverse_frame_3 - 0.068 13.4 2.1 0.12 12.6 2.1 1.4 1 1 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) DUF4735 PF15882.5 NODE_66001_length_242_cov_3.251208_g58060_i0forward_frame_2 - 0.027 13.9 0.0 0.028 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4735) LCE PF14672.6 NODE_65999_length_242_cov_3.545894_g58058_i0reverse_frame_2 - 0.015 15.9 5.7 0.017 15.7 5.7 1.2 1 0 0 1 1 1 0 Late cornified envelope CBM_21 PF03370.13 NODE_65998_length_242_cov_3.550725_g58057_i0reverse_frame_2 - 0.03 14.5 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate/starch-binding module (family 21) PhoLip_ATPase_C PF16212.5 NODE_65998_length_242_cov_3.550725_g58057_i0forward_frame_3 - 1.5e-08 34.7 4.8 1.6e-08 34.7 4.8 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal ATP-synt_8 PF00895.20 NODE_65998_length_242_cov_3.550725_g58057_i0forward_frame_3 - 0.059 13.8 4.0 3.3 8.2 0.5 2.1 1 1 1 2 2 2 0 ATP synthase protein 8 Creatininase PF02633.14 NODE_65997_length_242_cov_3.574879_g58056_i0forward_frame_2 - 0.12 11.9 0.0 0.12 11.9 0.0 1.0 1 0 0 1 1 1 0 Creatinine amidohydrolase Fer4_15 PF13459.6 NODE_65996_length_242_cov_3.642512_g58055_i0forward_frame_3 - 0.054 14.2 0.0 0.08 13.7 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain Arteri_env PF01606.16 NODE_65994_length_242_cov_5.903382_g58053_i0forward_frame_3 - 0.26 11.1 6.6 0.32 10.8 6.6 1.0 1 0 0 1 1 1 0 Arterivirus envelope protein DivIC PF04977.15 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.00051 19.7 1.3 0.00071 19.3 1.3 1.3 1 0 0 1 1 1 1 Septum formation initiator ZapB PF06005.12 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.0028 18.0 1.5 0.0045 17.4 1.5 1.2 1 0 0 1 1 1 1 Cell division protein ZapB ADIP PF11559.8 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.0057 16.8 1.5 0.0063 16.6 1.5 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding APG6_N PF17675.1 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.014 16.0 1.1 0.016 15.8 1.1 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region WD40_alt PF14077.6 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.026 14.4 0.6 0.082 12.8 0.6 1.9 1 0 0 1 1 1 0 Alternative WD40 repeat motif bZIP_1 PF00170.21 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.12 12.5 3.6 0.23 11.6 3.6 1.5 1 0 0 1 1 1 0 bZIP transcription factor bZIP_2 PF07716.15 NODE_65993_length_242_cov_7.768116_g58052_i0reverse_frame_3 - 0.62 10.2 5.7 0.94 9.6 0.5 2.6 2 1 1 3 3 3 0 Basic region leucine zipper CLN6 PF15156.6 NODE_65991_length_242_cov_10.077295_g58050_i0forward_frame_3 - 0.025 13.8 0.0 0.028 13.7 0.0 1.0 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 6 Mur_ligase_C PF02875.21 NODE_65990_length_242_cov_10.700483_g58049_i0reverse_frame_3 - 0.18 12.0 0.0 0.23 11.8 0.0 1.1 1 0 0 1 1 1 0 Mur ligase family, glutamate ligase domain Meis_PKNOX_N PF16493.5 NODE_65990_length_242_cov_10.700483_g58049_i0forward_frame_2 - 0.4 11.1 2.8 0.57 10.6 2.8 1.3 1 1 0 1 1 1 0 N-terminal of Homeobox Meis and PKNOX1 DUF5530 PF17670.1 NODE_65989_length_242_cov_14.367150_g58048_i0forward_frame_3 - 0.01 15.6 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5530) Fumarate_red_D PF02313.17 NODE_65989_length_242_cov_14.367150_g58048_i0forward_frame_2 - 0.16 12.1 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit D TNFR_16_TM PF18422.1 NODE_65987_length_242_cov_15.434783_g58046_i0forward_frame_3 - 0.076 13.0 0.3 0.14 12.2 0.3 1.4 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain Pkinase PF00069.25 NODE_65983_length_242_cov_32.975845_g58042_i0reverse_frame_3 - 6.1e-05 22.5 0.0 6.1e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain zf-ribbon_3 PF13248.6 NODE_65983_length_242_cov_32.975845_g58042_i0reverse_frame_2 - 0.2 11.1 5.8 4.1 7.0 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 NODE_65983_length_242_cov_32.975845_g58042_i0reverse_frame_2 - 2.7 7.8 8.4 1.4 8.7 1.1 3.0 2 1 0 2 2 2 0 zinc-ribbon domain DUF5445 PF17520.2 NODE_65982_length_242_cov_33.367150_g58041_i0forward_frame_3 - 0.00014 21.7 0.1 0.00021 21.1 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5445) FA_FANCE PF11510.8 NODE_65973_length_242_cov_47.502415_g58032_i0forward_frame_2 - 0.0018 17.6 2.2 0.0019 17.6 2.2 1.0 1 0 0 1 1 1 1 Fanconi Anaemia group E protein FANCE DUF2790 PF10976.8 NODE_65972_length_242_cov_47.507246_g58031_i0reverse_frame_3 - 0.054 13.5 0.1 0.071 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2790) CrgA PF06781.12 NODE_65968_length_242_cov_52.830918_g58027_i0forward_frame_3 - 0.18 11.9 0.0 0.3 11.2 0.0 1.4 1 1 0 1 1 1 0 Cell division protein CrgA Fer4_13 PF13370.6 NODE_65966_length_242_cov_56.821256_g58025_i0forward_frame_2 - 0.031 14.8 2.8 0.17 12.4 0.2 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Exc PF07825.11 NODE_65965_length_242_cov_57.207729_g58024_i0reverse_frame_2 - 0.08 12.9 0.0 0.15 12.1 0.0 1.5 1 1 1 2 2 2 0 Excisionase-like protein Tsc35 PF15079.6 NODE_65964_length_242_cov_59.164251_g58023_i0reverse_frame_2 - 0.0068 16.0 0.7 0.0088 15.6 0.7 1.1 1 0 0 1 1 1 1 Testis-specific protein 35 Chromo PF00385.24 NODE_65962_length_242_cov_60.420290_g58021_i0forward_frame_3 - 2e-06 27.6 0.2 2e-06 27.6 0.2 1.7 2 0 0 2 2 2 1 Chromo (CHRromatin Organisation MOdifier) domain DUF5570 PF17731.1 NODE_65962_length_242_cov_60.420290_g58021_i0forward_frame_2 - 0.031 14.4 1.6 0.036 14.2 1.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5570) S4 PF01479.25 NODE_65961_length_242_cov_61.014493_g58020_i0reverse_frame_3 - 0.18 11.5 0.1 0.24 11.1 0.1 1.2 1 0 0 1 1 1 0 S4 domain Adhesin_E PF16747.5 NODE_65959_length_242_cov_61.512077_g58018_i0reverse_frame_2 - 0.044 13.8 0.2 0.053 13.6 0.2 1.1 1 0 0 1 1 1 0 Surface-adhesin protein E SCIFF PF13165.6 NODE_65957_length_242_cov_65.019324_g58016_i0forward_frame_2 - 0.02 14.8 8.7 0.028 14.3 8.7 1.2 1 0 0 1 1 1 0 Six-cysteine peptide SCIFF Glyco_trans_1_3 PF13528.6 NODE_65956_length_242_cov_66.937198_g58015_i0forward_frame_2 - 0.094 11.9 0.0 0.094 11.9 0.0 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 1 UAA PF08449.11 NODE_65953_length_242_cov_69.396135_g58012_i0reverse_frame_2 - 0.035 13.3 0.0 0.037 13.2 0.0 1.0 1 0 0 1 1 1 0 UAA transporter family DUF997 PF06196.12 NODE_65953_length_242_cov_69.396135_g58012_i0reverse_frame_2 - 0.072 13.1 3.6 0.091 12.8 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF997) HlyE PF06109.13 NODE_65951_length_242_cov_72.173913_g58010_i0reverse_frame_2 - 0.022 14.1 0.1 0.022 14.1 0.1 1.2 1 0 0 1 1 1 0 Haemolysin E (HlyE) DUF5452 PF17533.2 NODE_65951_length_242_cov_72.173913_g58010_i0forward_frame_2 - 0.067 13.3 0.0 0.077 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5452) DUF3948 PF13134.6 NODE_65951_length_242_cov_72.173913_g58010_i0forward_frame_2 - 2.2 8.1 3.8 5.6 6.8 3.8 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3948) KIAA1430 PF13879.6 NODE_65950_length_242_cov_72.975845_g58009_i0forward_frame_3 - 0.1 13.4 7.2 0.13 13.0 7.2 1.3 1 0 0 1 1 1 0 KIAA1430 homologue EMC3_TMCO1 PF01956.16 NODE_65950_length_242_cov_72.975845_g58009_i0forward_frame_3 - 6.7 6.4 8.4 3.6 7.3 6.9 1.3 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF5570 PF17731.1 NODE_65950_length_242_cov_72.975845_g58009_i0forward_frame_2 - 0.73 9.9 3.6 0.43 10.7 2.2 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5570) TB2_DP1_HVA22 PF03134.19 NODE_65949_length_242_cov_77.801932_g58008_i0forward_frame_2 - 0.014 15.3 1.5 0.014 15.3 1.5 1.7 1 1 1 2 2 2 0 TB2/DP1, HVA22 family DUF4684 PF15736.5 NODE_65946_length_242_cov_81.144928_g58005_i0forward_frame_2 - 0.051 12.2 1.6 0.051 12.3 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4684) MORN PF02493.20 NODE_65944_length_242_cov_87.797101_g58003_i0forward_frame_2 - 1e-10 40.8 10.4 0.0002 21.0 1.6 3.2 3 0 0 3 3 3 3 MORN repeat DUF2573 PF10835.8 NODE_65941_length_242_cov_90.879227_g58000_i0reverse_frame_2 - 0.2 12.0 0.0 0.24 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2573) Tna_leader PF08053.11 NODE_65941_length_242_cov_90.879227_g58000_i0forward_frame_2 - 0.085 12.8 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 Tryptophanase operon leader peptide Cys_rich_CPCC PF14206.6 NODE_65938_length_242_cov_105.903382_g57997_i0reverse_frame_3 - 0.069 13.0 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Cysteine-rich CPCC INSC_LBD PF16748.5 NODE_65938_length_242_cov_105.903382_g57997_i0forward_frame_3 - 0.0029 17.0 0.4 0.0046 16.4 0.4 1.3 1 0 0 1 1 1 1 Inscuteable LGN-binding domain CPW_WPC PF09717.10 NODE_65937_length_242_cov_117.473430_g57996_i0reverse_frame_3 - 0.0036 18.3 0.1 0.0044 18.0 0.1 1.1 1 0 0 1 1 1 1 Plasmodium falciparum domain of unknown function (CPW_WPC) GCK PF07802.11 NODE_65936_length_242_cov_127.975845_g57995_i0reverse_frame_2 - 0.099 13.1 0.1 0.13 12.7 0.1 1.2 1 0 0 1 1 1 0 GCK domain SVM_signal PF12113.8 NODE_65936_length_242_cov_127.975845_g57995_i0forward_frame_2 - 0.12 12.3 0.9 0.12 12.3 0.9 1.9 2 1 0 2 2 2 0 SVM protein signal sequence XPB_DRD PF18458.1 NODE_65930_length_242_cov_150.053140_g57989_i0reverse_frame_3 - 0.038 13.9 0.1 0.097 12.6 0.0 1.6 1 1 1 2 2 2 0 Xeroderma pigmentosum group B helicase damage recognition domain ERGIC_N PF13850.6 NODE_65928_length_242_cov_198.202899_g57987_i0reverse_frame_3 - 0.0047 17.2 0.3 0.0056 17.0 0.3 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TRIC PF05197.13 NODE_65921_length_242_cov_252.705314_g57980_i0reverse_frame_3 - 0.067 12.8 0.0 0.076 12.6 0.0 1.0 1 0 0 1 1 1 0 TRIC channel Pro_3_hydrox_C PF05373.11 NODE_65917_length_242_cov_536.188406_g57976_i0forward_frame_3 - 0.013 15.5 0.2 0.016 15.3 0.2 1.1 1 0 0 1 1 1 0 L-proline 3-hydroxylase, C-terminal DUF898 PF05987.13 NODE_65913_length_242_cov_7082.000000_g57972_i0reverse_frame_2 - 0.05 12.7 0.3 0.05 12.7 0.3 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF3482 PF11981.8 NODE_65912_length_242_cov_26989.217391_g57971_i0forward_frame_3 - 0.052 12.9 8.7 0.064 12.6 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) IpaB_EvcA PF03278.13 NODE_65911_length_243_cov_0.865385_g57970_i0reverse_frame_3 - 0.18 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 IpaB/EvcA family Malate_DH PF12434.8 NODE_65911_length_243_cov_0.865385_g57970_i0reverse_frame_2 - 0.42 10.7 1.5 0.47 10.5 0.4 1.6 2 0 0 2 2 2 0 Malate dehydrogenase enzyme Rhodanese_C PF12368.8 NODE_65911_length_243_cov_0.865385_g57970_i0forward_frame_3 - 0.058 13.8 8.4 0.064 13.6 8.4 1.2 1 0 0 1 1 1 0 Rhodanase C-terminal RuBisCO_small PF00101.20 NODE_65909_length_243_cov_0.942308_g57968_i0reverse_frame_2 - 0.065 13.2 0.0 0.073 13.1 0.0 1.1 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain Glutaminase PF04960.15 NODE_65908_length_243_cov_0.956731_g57967_i0forward_frame_2 - 8.4e-20 71.1 0.1 9e-20 71.0 0.1 1.0 1 0 0 1 1 1 1 Glutaminase He_PIG PF05345.12 NODE_65905_length_243_cov_1.052885_g57964_i0reverse_frame_3 - 0.0067 16.6 0.4 0.016 15.4 0.4 1.7 1 1 0 1 1 1 1 Putative Ig domain zf-met PF12874.7 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 8.6e-05 22.8 4.3 0.025 15.0 0.8 2.4 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.00074 20.2 14.9 0.0024 18.5 2.9 3.0 3 0 0 3 3 3 2 C2H2-type zinc finger zf-Di19 PF05605.12 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.00086 19.5 9.5 0.0018 18.5 7.9 2.0 2 0 0 2 2 2 1 Drought induced 19 protein (Di19), zinc-binding zf-H2C2_2 PF13465.6 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.005 17.2 7.8 0.13 12.7 1.2 2.6 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2_jaz PF12171.8 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.011 16.0 2.5 0.016 15.5 0.2 2.1 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.022 15.2 3.2 0.022 15.2 3.2 2.7 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-C2H2_2 PF12756.7 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.26 11.6 5.9 1.3 9.4 1.0 2.1 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) Terminase_GpA PF05876.12 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 0.59 8.6 4.0 0.65 8.5 4.0 1.0 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) Rad50_zn_hook PF04423.14 NODE_65904_length_243_cov_1.057692_g57963_i0reverse_frame_3 - 2.6 7.9 6.9 2 8.3 0.5 2.2 2 0 0 2 2 2 0 Rad50 zinc hook motif DUF2960 PF11173.8 NODE_65903_length_243_cov_1.091346_g57962_i0forward_frame_3 - 0.033 14.6 3.7 3.6 8.1 0.1 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF2960) Lamprin PF06403.11 NODE_65903_length_243_cov_1.091346_g57962_i0forward_frame_2 - 2.3 8.2 15.9 0.47 10.4 7.7 2.2 1 1 1 2 2 2 0 Lamprin DUF3723 PF12520.8 NODE_65894_length_243_cov_1.153846_g57953_i0forward_frame_3 - 0.054 12.2 0.1 0.06 12.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3723) RuvB_C PF05491.13 NODE_65894_length_243_cov_1.153846_g57953_i0forward_frame_3 - 0.086 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain p31comet PF06581.12 NODE_65894_length_243_cov_1.153846_g57953_i0forward_frame_2 - 0.083 12.0 0.1 0.083 12.0 0.1 1.1 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding cpYpsA PF12694.7 NODE_65892_length_243_cov_1.153846_g57951_i0forward_frame_2 - 0.11 12.3 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Circularly permutated YpsA SLOG family UBM PF14377.6 NODE_65887_length_243_cov_1.288462_g57946_i0reverse_frame_2 - 0.099 12.1 0.2 0.16 11.5 0.2 1.3 1 0 0 1 1 1 0 Ubiquitin binding region PAN_1 PF00024.26 NODE_65884_length_243_cov_1.341346_g57943_i0forward_frame_3 - 0.036 14.0 4.6 0.057 13.4 4.6 1.5 1 1 0 1 1 1 0 PAN domain DUF565 PF04483.12 NODE_65882_length_243_cov_1.346154_g57941_i0forward_frame_2 - 3.9 8.1 5.8 1.1 9.8 0.3 2.5 2 1 0 3 3 3 0 Protein of unknown function (DUF565) DUF4657 PF15552.6 NODE_65880_length_243_cov_1.423077_g57939_i0forward_frame_3 - 0.043 13.4 1.7 0.06 12.9 0.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4657) AvrPtoB_bdg PF16847.5 NODE_65880_length_243_cov_1.423077_g57939_i0forward_frame_3 - 0.1 13.1 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Avirulence AvrPtoB, BAK1-binding domain Clusterin PF01093.17 NODE_65880_length_243_cov_1.423077_g57939_i0forward_frame_2 - 0.11 11.6 0.7 0.1 11.6 0.7 1.1 1 0 0 1 1 1 0 Clusterin MreB_Mbl PF06723.13 NODE_65879_length_243_cov_1.447115_g57938_i0forward_frame_2 - 0.064 12.1 0.0 0.066 12.0 0.0 1.0 1 0 0 1 1 1 0 MreB/Mbl protein NKAIN PF05640.14 NODE_65878_length_243_cov_1.471154_g57937_i0reverse_frame_3 - 0.028 13.7 0.2 0.029 13.6 0.2 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein DUF3810 PF12725.7 NODE_65874_length_243_cov_1.485577_g57933_i0forward_frame_3 - 1.2 8.4 3.8 1.1 8.6 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Croc_4 PF17691.1 NODE_65871_length_243_cov_1.495192_g57930_i0forward_frame_3 - 0.021 14.9 0.6 0.027 14.5 0.6 1.1 1 0 0 1 1 1 0 Contingent replication of cDNA 4 DIM1 PF02966.16 NODE_65867_length_243_cov_1.533654_g57926_i0forward_frame_3 - 0.071 12.9 0.0 0.079 12.7 0.0 1.1 1 0 0 1 1 1 0 Mitosis protein DIM1 MukB PF04310.12 NODE_65863_length_243_cov_1.548077_g57922_i0forward_frame_2 - 7e-34 117.6 0.0 7.6e-34 117.5 0.0 1.0 1 0 0 1 1 1 1 MukB N-terminal KIX PF02172.16 NODE_65863_length_243_cov_1.548077_g57922_i0forward_frame_2 - 0.094 13.0 0.2 0.91 9.8 0.0 2.0 1 1 1 2 2 2 0 KIX domain Ku_N PF03731.15 NODE_65862_length_243_cov_1.557692_g57921_i0forward_frame_2 - 0.02 14.6 0.0 0.02 14.6 0.0 1.1 1 0 0 1 1 1 0 Ku70/Ku80 N-terminal alpha/beta domain DUF412 PF04217.13 NODE_65861_length_243_cov_1.572115_g57920_i0reverse_frame_2 - 0.031 14.2 0.1 0.036 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF412 zf-C3HC4_2 PF13923.6 NODE_65859_length_243_cov_1.576923_g57918_i0reverse_frame_2 - 2.6e-05 24.0 1.0 2.6e-05 24.0 1.0 1.9 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_65859_length_243_cov_1.576923_g57918_i0reverse_frame_2 - 0.0011 18.8 2.3 0.0011 18.8 2.3 2.2 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_65859_length_243_cov_1.576923_g57918_i0reverse_frame_2 - 0.0042 17.1 4.7 0.0067 16.4 4.7 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_2 PF13639.6 NODE_65859_length_243_cov_1.576923_g57918_i0reverse_frame_2 - 0.0069 16.7 4.1 0.0069 16.7 4.1 2.0 1 1 1 2 2 2 1 Ring finger domain zf-C3HC4_4 PF15227.6 NODE_65859_length_243_cov_1.576923_g57918_i0reverse_frame_2 - 0.084 13.0 6.0 0.13 12.5 5.0 1.9 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING SfsA_N PF17746.1 NODE_65850_length_243_cov_1.682692_g57909_i0reverse_frame_2 - 0.077 13.2 0.0 0.094 12.9 0.0 1.2 1 0 0 1 1 1 0 SfsA N-terminal OB domain OrfB_Zn_ribbon PF07282.11 NODE_65848_length_243_cov_1.721154_g57907_i0forward_frame_3 - 0.0071 16.3 5.6 0.012 15.5 5.6 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain C1_1 PF00130.22 NODE_65848_length_243_cov_1.721154_g57907_i0forward_frame_3 - 0.014 15.3 4.1 0.02 14.8 4.1 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF5466 PF17554.2 NODE_65845_length_243_cov_1.754808_g57904_i0forward_frame_2 - 0.28 11.4 5.2 1.7 8.9 5.2 2.1 1 1 0 1 1 1 0 Family of unknown function (DUF5466) CBM49 PF09478.10 NODE_65843_length_243_cov_1.769231_g57902_i0forward_frame_3 - 0.085 13.2 0.0 0.092 13.1 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate binding domain CBM49 NS3_envE PF02723.14 NODE_65843_length_243_cov_1.769231_g57902_i0forward_frame_3 - 0.8 9.8 14.1 1.4 9.1 14.0 1.5 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Prok-RING_2 PF14445.6 NODE_65837_length_243_cov_1.836538_g57896_i0reverse_frame_2 - 0.021 15.0 0.8 0.032 14.4 0.8 1.5 1 1 0 1 1 1 0 Prokaryotic RING finger family 2 TAT_signal PF10518.9 NODE_65837_length_243_cov_1.836538_g57896_i0forward_frame_2 - 0.0038 17.0 1.0 0.0065 16.3 1.0 1.4 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence Tnp_DNA_bind PF14706.6 NODE_65836_length_243_cov_1.841346_g57895_i0reverse_frame_3 - 0.06 13.2 0.0 0.082 12.8 0.0 1.2 1 0 0 1 1 1 0 Transposase DNA-binding FUSC PF04632.12 NODE_65830_length_243_cov_1.918269_g57889_i0reverse_frame_2 - 2.2e-12 46.4 2.1 2.2e-12 46.3 2.1 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family Shisa PF13908.6 NODE_65829_length_243_cov_1.923077_g57888_i0reverse_frame_3 - 0.59 10.3 4.0 0.65 10.2 4.0 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator UL17 PF17640.2 NODE_65820_length_243_cov_2.019231_g57879_i0reverse_frame_3 - 1.8 8.6 5.3 0.9 9.6 1.1 2.0 1 1 1 2 2 2 0 Uncharacterized UL17 DUF4342 PF14242.6 NODE_65818_length_243_cov_2.033654_g57877_i0reverse_frame_3 - 0.096 12.7 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) Methyltransf_22 PF13383.6 NODE_65815_length_243_cov_2.072115_g57874_i0reverse_frame_3 - 0.069 12.7 0.0 0.086 12.4 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Cpn60_TCP1 PF00118.24 NODE_65812_length_243_cov_2.105769_g57871_i0reverse_frame_3 - 0.072 11.7 0.1 0.071 11.7 0.1 1.0 1 0 0 1 1 1 0 TCP-1/cpn60 chaperonin family SET_assoc PF11767.8 NODE_65810_length_243_cov_2.115385_g57869_i0forward_frame_3 - 0.19 11.4 0.1 3.6 7.3 0.0 2.1 1 1 1 2 2 2 0 Histone lysine methyltransferase SET associated Peptidase_S11 PF00768.20 NODE_65807_length_243_cov_2.211538_g57866_i0forward_frame_2 - 0.23 10.9 0.0 0.27 10.6 0.0 1.0 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase PTN_MK_N PF05196.13 NODE_65805_length_243_cov_2.254808_g57864_i0forward_frame_2 - 0.19 12.0 5.8 0.099 12.9 4.2 1.4 1 1 0 1 1 1 0 PTN/MK heparin-binding protein family, N-terminal domain SapA PF02199.15 NODE_65804_length_243_cov_2.274038_g57863_i0reverse_frame_3 - 0.024 14.9 0.2 0.06 13.6 0.2 1.7 1 0 0 1 1 1 0 Saposin A-type domain Feld-I_B PF09252.10 NODE_65803_length_243_cov_2.278846_g57862_i0reverse_frame_3 - 0.08 12.9 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Allergen Fel d I-B chain O-antigen_lig PF13425.6 NODE_65803_length_243_cov_2.278846_g57862_i0reverse_frame_2 - 0.11 11.2 0.4 0.13 11.1 0.4 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Melibiase_2 PF16499.5 NODE_65802_length_243_cov_2.293269_g57861_i0forward_frame_2 - 0.085 12.0 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 Alpha galactosidase A MORN PF02493.20 NODE_65801_length_243_cov_2.442308_g57860_i0forward_frame_2 - 0.00056 19.7 9.7 0.00077 19.2 3.0 3.4 4 0 0 4 4 4 1 MORN repeat Tudor_2 PF18104.1 NODE_65801_length_243_cov_2.442308_g57860_i0forward_frame_2 - 0.0074 15.9 0.1 0.016 14.8 0.1 1.6 1 0 0 1 1 1 1 Jumonji domain-containing protein 2A Tudor domain BALF1 PF06861.11 NODE_65800_length_243_cov_2.528846_g57859_i0reverse_frame_3 - 0.11 12.2 0.2 0.12 12.0 0.2 1.0 1 0 0 1 1 1 0 BALF1 protein CTV_P13 PF06922.11 NODE_65799_length_243_cov_2.572115_g57858_i0reverse_frame_2 - 0.13 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P13 protein Integrin_b_cyt PF08725.11 NODE_65797_length_243_cov_2.870192_g57856_i0reverse_frame_2 - 0.045 13.4 0.5 0.14 11.9 0.1 1.9 2 0 0 2 2 2 0 Integrin beta cytoplasmic domain DUF4783 PF16022.5 NODE_65795_length_243_cov_2.975962_g57854_i0forward_frame_2 - 0.011 15.9 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4783) Pentapeptide_4 PF13599.6 NODE_65792_length_243_cov_3.466346_g57851_i0forward_frame_3 - 0.021 15.0 0.2 0.03 14.5 0.2 1.4 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) GST_N PF02798.20 NODE_65792_length_243_cov_3.466346_g57851_i0forward_frame_2 - 2.5e-08 34.2 0.0 3e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 NODE_65792_length_243_cov_3.466346_g57851_i0forward_frame_2 - 9.6e-07 29.1 0.0 1.2e-06 28.8 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 NODE_65792_length_243_cov_3.466346_g57851_i0forward_frame_2 - 0.00014 22.1 0.0 0.00018 21.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Ig_6 PF18452.1 NODE_65789_length_243_cov_3.951923_g57848_i0reverse_frame_3 - 0.13 11.8 0.8 0.36 10.4 0.1 1.9 1 1 1 2 2 2 0 Immunoglobulin domain UK PF02512.14 NODE_65789_length_243_cov_3.951923_g57848_i0forward_frame_2 - 0.01 16.3 0.1 0.011 16.2 0.1 1.1 1 0 0 1 1 1 0 Virulence determinant Peptidase_M16 PF00675.20 NODE_65788_length_243_cov_4.048077_g57847_i0reverse_frame_2 - 0.00024 21.1 0.0 0.00028 20.9 0.0 1.1 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 NODE_65788_length_243_cov_4.048077_g57847_i0reverse_frame_2 - 0.077 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Peptidase M16 inactive domain ThrE PF06738.12 NODE_65787_length_243_cov_4.394231_g57846_i0reverse_frame_3 - 0.035 13.5 0.1 0.044 13.1 0.1 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter Spp-24 PF07448.11 NODE_65787_length_243_cov_4.394231_g57846_i0forward_frame_3 - 0.17 12.1 4.1 0.28 11.4 4.1 1.4 1 0 0 1 1 1 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain Aminotran_1_2 PF00155.21 NODE_65787_length_243_cov_4.394231_g57846_i0forward_frame_2 - 2.5e-14 53.3 0.0 2.8e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II S_2TMBeta PF18153.1 NODE_65786_length_243_cov_4.572115_g57845_i0reverse_frame_2 - 0.11 12.3 3.1 0.12 12.1 3.1 1.1 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain MMgT PF10270.9 NODE_65785_length_243_cov_5.024038_g57844_i0reverse_frame_2 - 0.11 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Membrane magnesium transporter Sod_Cu PF00080.20 NODE_65780_length_243_cov_12.812500_g57839_i0reverse_frame_3 - 0.0012 19.0 0.4 0.002 18.3 0.2 1.5 2 0 0 2 2 2 1 Copper/zinc superoxide dismutase (SODC) DUF5427 PF10310.9 NODE_65779_length_243_cov_20.014423_g57838_i0reverse_frame_3 - 0.066 12.2 0.1 0.066 12.2 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5427) MBF1 PF08523.10 NODE_65778_length_243_cov_20.653846_g57837_i0reverse_frame_2 - 0.17 12.4 2.6 0.23 12.0 2.6 1.3 1 1 0 1 1 1 0 Multiprotein bridging factor 1 Oxidored_q3 PF00499.20 NODE_65777_length_243_cov_21.552885_g57836_i0forward_frame_3 - 0.15 11.8 4.8 0.16 11.7 4.8 1.0 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GBP_PSP PF02425.15 NODE_65775_length_243_cov_27.524038_g57834_i0reverse_frame_3 - 0.033 13.8 3.3 0.051 13.2 3.3 1.3 1 0 0 1 1 1 0 Paralytic/GBP/PSP peptide Toxin_2 PF00451.19 NODE_65773_length_243_cov_31.870192_g57832_i0forward_frame_2 - 0.026 14.8 0.1 0.047 14.0 0.1 1.4 1 0 0 1 1 1 0 Scorpion short toxin, BmKK2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks336.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks336.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks336.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks336.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Gram_pos_anchor PF00746.21 NODE_65768_length_243_cov_42.149038_g57827_i0reverse_frame_3 - 0.12 12.3 1.6 0.16 11.9 1.6 1.2 1 0 0 1 1 1 0 LPXTG cell wall anchor motif CcmD PF04995.14 NODE_65768_length_243_cov_42.149038_g57827_i0reverse_frame_3 - 1.4 9.0 9.2 1.9 8.6 9.2 1.2 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) RNA_polI_A34 PF08208.11 NODE_65768_length_243_cov_42.149038_g57827_i0forward_frame_2 - 0.015 15.4 13.0 0.018 15.1 13.0 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Ndc1_Nup PF09531.10 NODE_65767_length_243_cov_43.062500_g57826_i0reverse_frame_2 - 0.26 9.9 6.1 0.3 9.7 6.1 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Phage_holin_3_6 PF07332.11 NODE_65767_length_243_cov_43.062500_g57826_i0reverse_frame_2 - 3.1 7.9 9.1 3.5 7.7 9.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III PRP38_assoc PF12871.7 NODE_65767_length_243_cov_43.062500_g57826_i0forward_frame_3 - 0.2 12.3 33.4 0.27 11.9 33.4 1.2 1 0 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term DUF3867 PF12983.7 NODE_65766_length_243_cov_43.475962_g57825_i0reverse_frame_3 - 0.014 15.5 1.1 0.016 15.3 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3867) RecR PF02132.15 NODE_65766_length_243_cov_43.475962_g57825_i0reverse_frame_2 - 0.085 12.4 0.8 0.17 11.5 0.8 1.4 1 0 0 1 1 1 0 RecR protein DUF3265 PF11665.8 NODE_65765_length_243_cov_43.956731_g57824_i0reverse_frame_3 - 0.12 12.6 0.8 0.12 12.6 0.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3265) CRT-like PF08627.10 NODE_65764_length_243_cov_46.466346_g57823_i0reverse_frame_2 - 0.042 12.8 0.5 0.044 12.7 0.5 1.0 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like MRI PF15325.6 NODE_65763_length_243_cov_46.865385_g57822_i0forward_frame_3 - 0.13 13.3 5.1 0.16 13.1 5.1 1.1 1 0 0 1 1 1 0 Modulator of retrovirus infection Rrn6 PF10214.9 NODE_65763_length_243_cov_46.865385_g57822_i0forward_frame_3 - 4.2 5.7 13.9 4.6 5.6 13.9 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor OmdA PF13376.6 NODE_65762_length_243_cov_48.173077_g57821_i0reverse_frame_2 - 3.9e-05 23.6 0.8 5.7e-05 23.0 0.8 1.2 1 0 0 1 1 1 1 Bacteriocin-protection, YdeI or OmpD-Associated zf-DNL PF05180.12 NODE_65757_length_243_cov_51.346154_g57816_i0forward_frame_3 - 0.053 13.5 3.3 0.1 12.6 3.3 1.6 1 1 0 1 1 1 0 DNL zinc finger Peptidase_C107 PF17222.3 NODE_65757_length_243_cov_51.346154_g57816_i0forward_frame_3 - 0.11 11.5 1.8 0.14 11.1 0.9 1.5 1 1 1 2 2 2 0 Viral cysteine endopeptidase C107 Phospholamban PF04272.14 NODE_65756_length_243_cov_51.639423_g57815_i0reverse_frame_3 - 0.014 14.8 0.3 0.014 14.8 0.3 1.6 2 0 0 2 2 2 0 Phospholamban AAA_23 PF13476.6 NODE_65755_length_243_cov_52.461538_g57814_i0reverse_frame_2 - 5.3 7.5 14.7 5.4 7.5 14.7 1.1 1 0 0 1 1 1 0 AAA domain C2-C2_1 PF11618.8 NODE_65752_length_243_cov_55.173077_g57811_i0reverse_frame_2 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 First C2 domain of RPGR-interacting protein 1 DUF5502 PF17606.2 NODE_65748_length_243_cov_58.937500_g57807_i0reverse_frame_2 - 0.038 14.7 0.1 0.045 14.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5502) JAKMIP_CC3 PF16034.5 NODE_65746_length_243_cov_61.504808_g57805_i0reverse_frame_2 - 0.14 12.1 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 JAKMIP CC3 domain DUF2417 PF10329.9 NODE_65745_length_243_cov_65.451923_g57804_i0forward_frame_3 - 7.4 5.9 8.6 7.6 5.9 8.6 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF5363 PF17320.2 NODE_65744_length_243_cov_67.942308_g57803_i0forward_frame_3 - 1.1 9.2 2.7 3.3 7.7 1.2 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5363) TIR PF01582.20 NODE_65741_length_243_cov_72.504808_g57800_i0forward_frame_2 - 0.015 15.1 0.0 0.018 14.8 0.0 1.1 1 0 0 1 1 1 0 TIR domain Cas_APE2256 PF09651.10 NODE_65740_length_243_cov_78.004808_g57799_i0forward_frame_2 - 0.088 12.7 0.0 0.098 12.6 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_APE2256) DUF4224 PF13986.6 NODE_65739_length_243_cov_84.663462_g57798_i0forward_frame_3 - 0.088 12.7 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4224) Prothymosin PF03247.14 NODE_65738_length_243_cov_89.110577_g57797_i0forward_frame_3 - 0.17 12.4 0.2 0.2 12.1 0.2 1.1 1 0 0 1 1 1 0 Prothymosin/parathymosin family ApoO PF09769.9 NODE_65736_length_243_cov_92.879808_g57795_i0forward_frame_2 - 0.018 15.0 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Apolipoprotein O IF3_N PF05198.16 NODE_65732_length_243_cov_99.706731_g57791_i0reverse_frame_2 - 0.25 11.6 3.5 0.35 11.2 3.5 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-3, N-terminal domain Herpes_LMP1 PF05297.11 NODE_65732_length_243_cov_99.706731_g57791_i0forward_frame_2 - 6.8 5.8 9.2 7.9 5.6 9.2 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF3677 PF12432.8 NODE_65729_length_243_cov_119.846154_g57788_i0forward_frame_3 - 0.0087 16.4 0.0 0.01 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3677) KASH PF10541.9 NODE_65727_length_243_cov_126.538462_g57786_i0forward_frame_2 - 0.18 12.1 2.9 11 6.3 0.3 2.1 2 0 0 2 2 2 0 Nuclear envelope localisation domain GATA PF00320.27 NODE_65717_length_243_cov_201.442308_g57776_i0forward_frame_3 - 0.024 14.3 0.4 0.05 13.2 0.4 1.5 1 0 0 1 1 1 0 GATA zinc finger AA_permease PF00324.21 NODE_65716_length_243_cov_250.105769_g57775_i0reverse_frame_3 - 0.084 11.4 0.1 0.089 11.4 0.1 1.0 1 0 0 1 1 1 0 Amino acid permease Chromadorea_ALT PF05535.12 NODE_65715_length_243_cov_294.105769_g57774_i0reverse_frame_3 - 0.0022 18.1 0.6 0.0027 17.8 0.6 1.1 1 0 0 1 1 1 1 Chromadorea ALT protein DUF1631 PF07793.11 NODE_65713_length_243_cov_328.120192_g57772_i0reverse_frame_2 - 0.058 11.8 0.0 0.06 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) JAB PF01398.21 NODE_65713_length_243_cov_328.120192_g57772_i0reverse_frame_2 - 0.087 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 JAB1/Mov34/MPN/PAD-1 ubiquitin protease CtIP_N PF10482.9 ORF98928 - 0.0044 17.0 9.6 0.0053 16.8 9.6 1.1 1 0 0 1 1 1 1 Tumour-suppressor protein CtIP N-terminal domain KELK PF15796.5 ORF98928 - 0.071 13.6 14.6 1.2 9.6 7.1 2.2 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DASH_Dad4 PF08650.10 ORF98928 - 0.16 11.9 5.9 0.29 11.1 0.4 2.1 1 1 1 2 2 2 0 DASH complex subunit Dad4 Ax_dynein_light PF10211.9 ORF98928 - 0.2 11.6 13.5 0.24 11.3 13.5 1.2 1 0 0 1 1 1 0 Axonemal dynein light chain DUF3450 PF11932.8 ORF98928 - 0.24 10.7 7.7 0.25 10.6 7.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ADIP PF11559.8 ORF98928 - 0.26 11.3 13.3 0.3 11.2 13.3 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding L_lactis_ph-MCP PF06673.11 ORF98928 - 0.38 9.7 4.8 0.4 9.6 4.8 1.2 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein YgaB PF14182.6 ORF98928 - 0.46 10.9 10.8 4.1 7.9 10.8 2.0 1 1 0 1 1 1 0 YgaB-like protein NAD_binding_6 PF08030.12 ORF98757 - 0.16 12.1 0.4 0.16 12.1 0.4 1.0 1 0 0 1 1 1 0 Ferric reductase NAD binding domain FAM76 PF16046.5 ORF9797 - 0.045 13.1 0.1 0.046 13.1 0.1 1.0 1 0 0 1 1 1 0 FAM76 protein HemY_N PF07219.13 ORF97619 - 2.3 8.5 4.0 0.48 10.6 1.0 1.4 2 0 0 2 2 2 0 HemY protein N-terminus DUF1324 PF07038.11 ORF97537 - 0.13 12.5 5.5 0.63 10.3 1.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1324) SPC25 PF06703.11 ORF97521 - 0.13 12.0 0.2 0.13 12.0 0.2 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF2368 PF10166.9 ORF97309 - 0.17 11.5 0.6 0.23 11.1 0.5 1.3 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2368) MTCP1 PF08991.10 ORF97082 - 0.071 13.4 1.4 0.11 12.7 1.4 1.3 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type DUF5381 PF17353.2 ORF97073 - 0.082 12.7 3.5 0.089 12.5 3.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) Sigma_reg_N PF13800.6 ORF97073 - 0.14 12.5 2.4 0.19 12.0 2.4 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF5546 PF17700.1 ORF96704 - 0.18 12.1 7.7 0.18 12.1 7.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5546) Med17 PF10156.9 ORF96329 - 0.0053 15.5 0.7 0.0059 15.4 0.7 1.0 1 0 0 1 1 1 1 Subunit 17 of Mediator complex 7TM_transglut PF14402.6 ORF96220 - 0.007 15.9 1.8 0.0081 15.7 1.8 1.0 1 0 0 1 1 1 1 7 transmembrane helices usually fused to an inactive transglutaminase DUF4802 PF16060.5 ORF95088 - 0.14 12.3 1.5 0.48 10.6 0.5 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4802) RIC1 PF07064.13 ORF94845 - 0.02 14.3 2.7 0.021 14.3 2.7 1.1 1 0 0 1 1 1 0 RIC1 NHS PF15273.6 ORF94761 - 0.15 11.1 2.1 0.18 10.9 2.1 1.0 1 0 0 1 1 1 0 NHS-like Bunya_NS-S_2 PF03231.13 ORF94268 - 0.0031 16.4 0.9 0.0035 16.2 0.9 1.0 1 0 0 1 1 1 1 Bunyavirus non-structural protein NS-S ComFB PF10719.9 ORF93458 - 0.098 12.8 0.2 0.11 12.6 0.2 1.2 1 0 0 1 1 1 0 Late competence development protein ComFB Calc_CGRP_IAPP PF00214.19 ORF92589 - 0.02 15.2 0.0 0.021 15.2 0.0 1.1 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family TFIIF_beta PF02270.15 ORF92296 - 0.083 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 TFIIF, beta subunit HTH domain DUF4820 PF16091.5 ORF92232 - 8.4 5.7 11.7 9 5.6 11.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) TFIIB PF00382.19 ORF92049 - 0.00052 20.0 0.4 0.002 18.1 0.1 1.9 2 0 0 2 2 2 1 Transcription factor TFIIB repeat Cyclin_C PF02984.19 ORF92049 - 0.005 16.9 0.1 0.0062 16.6 0.1 1.2 1 0 0 1 1 1 1 Cyclin, C-terminal domain Cyclin_C_2 PF16899.5 ORF92049 - 0.041 14.3 0.8 0.068 13.6 0.8 1.4 1 1 0 1 1 1 0 Cyclin C-terminal domain DUF1534 PF07551.11 ORF91255 - 0.032 14.0 1.3 0.051 13.3 0.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1534) YaaC PF14175.6 ORF90747 - 0.07 12.4 0.0 0.078 12.2 0.0 1.0 1 0 0 1 1 1 0 YaaC-like Protein Vps55 PF04133.14 ORF90390 - 0.058 13.4 0.1 0.081 12.9 0.1 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting 55 FANCI_S2 PF14676.6 ORF90198 - 0.011 16.1 0.7 0.011 16.0 0.7 1.1 1 0 0 1 1 1 0 FANCI solenoid 2 TPK_B1_binding PF04265.14 ORF90051 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Bunya_NS-S_2 PF03231.13 ORF88640 - 0.0031 16.4 0.9 0.0035 16.2 0.9 1.0 1 0 0 1 1 1 1 Bunyavirus non-structural protein NS-S DUF5381 PF17353.2 ORF88284 - 0.13 12.0 3.0 0.14 11.9 3.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) CRT-like PF08627.10 ORF8821 - 0.0033 16.4 0.3 0.0039 16.2 0.3 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like Pilt PF15453.6 ORF88060 - 0.029 13.8 0.5 0.033 13.6 0.5 1.0 1 0 0 1 1 1 0 Protein incorporated later into Tight Junctions DUF1582 PF07621.11 ORF87523 - 0.073 13.0 0.7 0.14 12.1 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1582) Nodulin_late PF07127.11 ORF87276 - 0.021 15.2 1.3 0.031 14.6 1.3 1.3 1 0 0 1 1 1 0 Late nodulin protein zf-Tim10_DDP PF02953.15 ORF87089 - 5.1e-09 35.7 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF87089 - 0.053 14.1 0.1 0.068 13.8 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 fn3_2 PF16893.5 ORF86299 - 0.014 15.5 0.1 0.018 15.2 0.1 1.2 1 0 0 1 1 1 0 Fibronectin type III domain Caudo_TAP PF02413.17 ORF85398 - 0.057 13.6 0.1 0.073 13.2 0.1 1.2 1 0 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK DUF5427 PF10310.9 ORF85214 - 0.16 10.9 0.1 0.17 10.8 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5427) Far-17a_AIG1 PF04750.14 ORF84486 - 0.02 14.2 1.2 0.023 14.0 1.2 1.1 1 0 0 1 1 1 0 FAR-17a/AIG1-like protein DUF3473 PF11959.8 ORF84180 - 0.12 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3473) BofA PF07441.11 ORF84058 - 0.01 16.0 2.3 0.012 15.8 2.3 1.3 1 1 0 1 1 1 0 SigmaK-factor processing regulatory protein BofA DUF4428 PF14471.6 ORF83954 - 0.015 15.2 0.0 0.024 14.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) DUF334 PF03904.13 ORF83725 - 0.046 13.3 0.2 0.048 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) DUF2889 PF11136.8 ORF8316 - 0.047 14.0 1.1 0.054 13.8 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2889) fn3_2 PF16893.5 ORF82760 - 0.014 15.5 0.1 0.018 15.2 0.1 1.2 1 0 0 1 1 1 0 Fibronectin type III domain DUF3704 PF12488.8 ORF82560 - 0.026 14.2 0.1 0.038 13.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3704) KNOX1 PF03790.13 ORF81023 - 0.015 15.0 0.3 0.034 13.9 0.3 1.5 1 0 0 1 1 1 0 KNOX1 domain zf-Tim10_DDP PF02953.15 ORF8 - 7e-09 35.2 8.0 8.9e-09 34.9 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF8 - 0.062 13.9 0.1 0.08 13.5 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 EIID-AGA PF03613.14 ORF79902 - 2.1e-20 73.0 2.5 2.2e-20 72.9 2.5 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component Exo84_C PF16528.5 ORF79604 - 0.091 12.6 1.5 0.1 12.4 1.5 1.1 1 0 0 1 1 1 0 Exocyst component 84 C-terminal PAAR_motif PF05488.13 ORF79516 - 0.036 14.2 0.1 0.059 13.5 0.1 1.3 1 0 0 1 1 1 0 PAAR motif Cpn60_TCP1 PF00118.24 ORF78982 - 3.1e-11 42.6 0.0 3.5e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family YrpD PF15493.6 ORF78763 - 0.12 12.2 0.4 0.14 12.0 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function, YrpD TPK_B1_binding PF04265.14 ORF78531 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain zf-C3HC4_3 PF13920.6 ORF78166 - 0.031 14.1 5.3 0.046 13.6 5.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Gly_acyl_tr_C PF08444.10 ORF77783 - 0.14 12.4 0.7 0.17 12.2 0.7 1.1 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region WHAMM-JMY_N PF15920.5 ORF77294 - 0.16 11.8 1.0 0.26 11.2 1.0 1.3 1 0 0 1 1 1 0 N-terminal of Junction-mediating and WASP homolog-associated zf-C3HC4_2 PF13923.6 ORF76764 - 0.042 13.7 0.0 0.071 13.0 0.0 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF848 PF05852.11 ORF76707 - 0.078 13.1 0.0 0.081 13.0 0.0 1.1 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) DUF3721 PF12518.8 ORF76342 - 0.078 12.8 0.1 9.5 6.2 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function Exonuc_VII_S PF02609.16 ORF76141 - 8.6e-22 76.9 2.8 1.1e-21 76.7 2.8 1.1 1 0 0 1 1 1 1 Exonuclease VII small subunit DUF4164 PF13747.6 ORF76141 - 0.15 12.3 2.6 7 7.0 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) PRD PF00874.20 ORF75993 - 0.15 12.3 5.7 0.23 11.8 5.4 1.5 1 1 0 1 1 1 0 PRD domain DUF763 PF05559.11 ORF75993 - 0.19 10.9 2.1 0.22 10.7 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF763) Tombus_P19 PF03220.13 ORF75074 - 0.015 15.0 0.1 0.015 15.0 0.1 1.2 1 0 0 1 1 1 0 Tombusvirus P19 core protein Opiods_neuropep PF01160.18 ORF75033 - 0.062 13.4 1.0 0.17 12.0 1.0 1.8 1 1 0 1 1 1 0 Vertebrate endogenous opioids neuropeptide MSA-2c PF12238.8 ORF74494 - 0.15 12.0 0.6 0.17 11.8 0.6 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Pex2_Pex12 PF04757.14 ORF7445 - 0.014 15.0 0.3 0.017 14.8 0.3 1.1 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region Comm PF15957.5 ORF74050 - 4.6 7.6 6.1 6.1 7.2 6.1 1.3 1 0 0 1 1 1 0 Commissureless IGFL PF14653.6 ORF7333 - 0.0042 17.0 0.3 0.0059 16.5 0.3 1.3 1 0 0 1 1 1 1 Insulin growth factor-like family TRSP PF12500.8 ORF72575 - 0.15 12.0 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 TRSP domain C terminus to PRTase_2 DUF4572 PF15139.6 ORF72144 - 0.043 13.7 0.0 0.043 13.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4572) zinc_ribbon_6 PF14599.6 ORF71945 - 0.1 12.7 0.1 0.1 12.7 0.1 1.5 2 0 0 2 2 2 0 Zinc-ribbon Mss4 PF04421.13 ORF71945 - 0.11 12.6 0.5 3.9 7.7 0.1 2.1 1 1 1 2 2 2 0 Mss4 protein PRD_Mga PF08270.11 ORF71784 - 0.046 13.4 0.6 0.053 13.2 0.6 1.1 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) PRD domain Fib_alpha PF08702.10 ORF71784 - 0.066 13.4 1.6 0.072 13.3 1.6 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family UBX PF00789.20 ORF71731 - 0.00098 19.3 0.0 0.0012 19.0 0.0 1.2 1 0 0 1 1 1 1 UBX domain Toxin_15 PF07906.13 ORF71066 - 1e-07 31.8 0.0 1.1e-07 31.7 0.0 1.1 1 0 0 1 1 1 1 ShET2 enterotoxin, N-terminal region GldH_lipo PF14109.6 ORF70706 - 0.12 13.2 0.0 0.14 12.9 0.0 1.0 1 0 0 1 1 1 0 GldH lipoprotein GntR PF00392.21 ORF70630 - 0.06 13.0 0.0 0.088 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family SecIII_SopE_N PF05364.14 ORF70422 - 0.074 13.1 0.3 0.11 12.6 0.3 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus DUF3902 PF13042.6 ORF69906 - 0.036 13.7 0.5 0.041 13.5 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3902) YjcZ_2 PF09680.10 ORF69802 - 0.024 14.3 2.6 0.041 13.5 2.6 1.3 1 0 0 1 1 1 0 Family of unknown function BLOC1_2 PF10046.9 ORF69382 - 0.018 15.3 0.1 0.024 14.9 0.1 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Dynamitin PF04912.14 ORF69203 - 0.0068 15.8 6.2 0.0068 15.8 6.2 1.0 1 0 0 1 1 1 1 Dynamitin ZapB PF06005.12 ORF69203 - 0.032 14.7 9.9 0.051 14.0 9.9 1.3 1 0 0 1 1 1 0 Cell division protein ZapB DUF2681 PF10883.8 ORF69203 - 0.24 11.8 5.9 0.3 11.5 5.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) JIP_LZII PF16471.5 ORF69203 - 0.27 11.4 7.7 0.55 10.4 2.7 2.2 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II Tho2 PF11262.8 ORF69203 - 0.71 9.0 4.8 0.83 8.8 4.8 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 DivIC PF04977.15 ORF69203 - 0.81 9.5 11.3 1.5 8.6 8.6 2.0 1 1 1 2 2 2 0 Septum formation initiator DUF5320 PF17253.2 ORF69203 - 1.6 9.8 3.5 0.78 10.8 1.2 1.6 1 1 1 2 2 2 0 Family of unknown function (DUF5320) Toxin_4 PF00706.17 ORF69180 - 0.69 10.4 5.3 1.5 9.3 0.5 2.4 2 1 0 2 2 2 0 Anenome neurotoxin TfoX_C PF04994.13 ORF69093 - 0.055 13.6 0.2 4.2 7.5 0.0 2.1 1 1 1 2 2 2 0 TfoX C-terminal domain Circo_capsid PF02443.15 ORF6901 - 0.017 14.7 2.9 0.017 14.7 2.9 1.1 1 0 0 1 1 1 0 Circovirus capsid protein IncE PF17627.2 ORF6886 - 0.039 14.0 0.1 0.039 14.0 0.1 1.1 1 0 0 1 1 1 0 Inclusion membrane protein E cNMP_binding PF00027.29 ORF6857 - 4.9e-06 26.5 0.0 7.4e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Ras PF00071.22 ORF68107 - 0.00013 21.6 0.1 0.00019 21.1 0.1 1.3 1 0 0 1 1 1 1 Ras family Archease PF01951.16 ORF68107 - 0.011 15.9 0.0 0.016 15.4 0.0 1.2 1 0 0 1 1 1 0 Archease protein family (MTH1598/TM1083) DUF648 PF04890.13 ORF68102 - 0.041 13.6 0.9 0.046 13.5 0.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF648) zf-Tim10_DDP PF02953.15 ORF68012 - 5.2e-09 35.6 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF68012 - 0.057 14.0 0.1 0.073 13.7 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 WRNPLPNID PF15017.6 ORF67602 - 0.03 15.2 1.1 0.037 14.9 1.1 1.1 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box PKS_DE PF18369.1 ORF67351 - 0.06 13.9 0.7 0.083 13.5 0.1 1.5 2 0 0 2 2 2 0 Polyketide synthase dimerisation element domain MORN PF02493.20 ORF66189 - 9.4e-05 22.1 10.5 0.00046 19.9 0.6 3.3 4 0 0 4 4 4 2 MORN repeat DUF5381 PF17353.2 ORF65791 - 0.094 12.5 0.5 0.11 12.2 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5381) DGF-1_C PF11040.8 ORF6551 - 0.011 15.7 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus DUF1720 PF08226.11 ORF64753 - 0.069 13.6 0.6 0.089 13.2 0.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1720) DUF5337 PF17272.2 ORF64162 - 0.0096 15.7 0.1 0.012 15.4 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5337) Glyco_hydro_45 PF02015.16 ORF6379 - 0.073 13.0 0.0 0.079 12.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 45 Rb_C PF08934.10 ORF63412 - 0.005 16.6 0.9 0.0053 16.6 0.9 1.1 1 0 0 1 1 1 1 Rb C-terminal domain Nop14 PF04147.12 ORF63412 - 0.17 10.1 13.8 0.18 10.0 13.8 1.0 1 0 0 1 1 1 0 Nop14-like family DTHCT PF08070.11 ORF63412 - 0.5 11.1 7.1 0.7 10.7 7.1 1.4 1 1 0 1 1 1 0 DTHCT (NUC029) region DUF4594 PF15266.6 ORF63133 - 0.23 11.8 0.8 0.23 11.8 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4594) Trypan_PARP PF05887.11 ORF63133 - 0.7 9.9 8.9 0.79 9.7 8.9 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) NESP55 PF06390.12 ORF62856 - 0.61 9.6 1.9 0.7 9.4 1.9 1.1 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) KNOX1 PF03790.13 ORF61139 - 0.015 15.0 0.3 0.034 13.9 0.3 1.5 1 0 0 1 1 1 0 KNOX1 domain Glyco_hydro81C PF17652.1 ORF61102 - 0.14 11.4 0.0 0.16 11.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 81 C-terminal domain TPK_B1_binding PF04265.14 ORF60978 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain IKKbetaNEMObind PF12179.8 ORF60902 - 0.42 10.7 5.0 0.24 11.4 2.2 2.2 2 1 0 2 2 2 0 I-kappa-kinase-beta NEMO binding domain DUF2682 PF10909.8 ORF60833 - 0.16 12.5 3.9 0.23 12.0 3.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2682) Spec3 PF15795.5 ORF60764 - 1.7e-09 38.1 18.8 3.3e-08 33.9 18.8 2.0 1 1 0 1 1 1 1 Ectodermal ciliogenesis protein TM2 PF05154.16 ORF60764 - 1.4 9.3 14.0 0.51 10.7 6.5 2.2 2 0 0 2 2 2 0 TM2 domain BAH PF01426.18 ORF60564 - 0.12 12.2 0.1 0.15 11.9 0.1 1.1 1 0 0 1 1 1 0 BAH domain DM PF00751.18 ORF60476 - 4.4 7.3 11.4 0.39 10.7 2.6 2.8 3 0 0 3 3 3 0 DM DNA binding domain EF-hand_1 PF00036.32 ORF60327 - 0.048 13.2 0.0 0.1 12.2 0.0 1.6 1 0 0 1 1 1 0 EF hand CDC50 PF03381.15 ORF59822 - 0.073 12.6 0.2 0.073 12.6 0.2 1.1 1 0 0 1 1 1 0 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF5614 PF18474.1 ORF59597 - 0.097 12.0 0.2 0.11 11.7 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5614) DUF507 PF04368.13 ORF58516 - 0.00028 20.9 1.3 0.00029 20.8 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF507) Pex19 PF04614.12 ORF58516 - 0.014 15.2 1.0 0.014 15.1 0.9 1.3 1 1 0 1 1 1 0 Pex19 protein family DUF150_C PF17384.2 ORF58516 - 0.049 13.8 0.3 0.11 12.7 0.3 1.6 1 1 0 1 1 1 0 RimP C-terminal SH3 domain TPK_B1_binding PF04265.14 ORF58347 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain RecR PF02132.15 ORF5786 - 0.36 10.4 4.6 0.23 11.1 0.7 2.2 2 0 0 2 2 2 0 RecR protein V1R PF03402.14 ORF5786 - 0.46 10.1 10.9 0.52 9.9 10.9 1.0 1 0 0 1 1 1 0 Vomeronasal organ pheromone receptor family, V1R DBB PF14545.6 ORF57395 - 0.034 14.1 0.1 0.037 13.9 0.1 1.1 1 0 0 1 1 1 0 Dof, BCAP, and BANK (DBB) motif, DUF3811 PF11656.8 ORF57045 - 0.019 15.4 4.3 0.024 15.0 4.3 1.1 1 0 0 1 1 1 0 YjbD family (DUF3811) Comm PF15957.5 ORF55406 - 4.6 7.6 6.1 6.1 7.2 6.1 1.3 1 0 0 1 1 1 0 Commissureless DEC1 PF15859.5 ORF54708 - 0.16 12.0 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Deleted in esophageal cancer 1 family TFIIF_beta PF02270.15 ORF54269 - 0.083 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 TFIIF, beta subunit HTH domain TTKRSYEDQ PF10212.9 ORF53756 - 0.045 12.8 2.1 0.048 12.7 2.1 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein GATA PF00320.27 ORF52516 - 0.04 13.5 0.7 0.04 13.5 0.7 2.0 3 0 0 3 3 3 0 GATA zinc finger zf-C2H2 PF00096.26 ORF52299 - 1.6e-09 37.7 15.0 6.1e-06 26.4 3.8 2.1 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF52299 - 5.6e-09 36.0 14.9 8.8e-05 22.8 1.8 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF52299 - 3.3e-07 30.6 12.3 0.00028 21.5 1.9 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger PyrI_C PF02748.15 ORF52299 - 0.00014 21.7 3.6 0.086 12.8 0.2 2.2 2 0 0 2 2 2 2 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-H2C2_5 PF13909.6 ORF52299 - 0.00029 20.5 3.4 0.00029 20.5 3.4 2.6 2 1 0 2 2 2 1 C2H2-type zinc-finger domain zf-C2H2_2 PF12756.7 ORF52299 - 0.00038 20.8 4.9 0.062 13.6 0.5 2.0 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-C2H2_6 PF13912.6 ORF52299 - 0.0018 18.2 12.5 0.0096 15.9 1.1 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-BED PF02892.15 ORF52299 - 0.0049 16.9 9.6 0.16 12.0 2.0 2.2 1 1 1 2 2 2 2 BED zinc finger zf-CHCC PF10276.9 ORF52299 - 0.0056 16.7 3.6 0.09 12.8 0.6 2.2 2 0 0 2 2 2 1 Zinc-finger domain zf-AN1 PF01428.16 ORF52299 - 0.0079 16.3 3.3 0.31 11.2 0.5 2.2 2 0 0 2 2 2 1 AN1-like Zinc finger zinc_ribbon_9 PF14369.6 ORF52299 - 0.012 15.8 0.4 2.6 8.4 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon zf-C2H2_3rep PF18868.1 ORF52299 - 0.012 16.2 4.2 0.023 15.4 0.5 2.0 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats LIM PF00412.22 ORF52299 - 0.016 15.4 2.4 3.4 8.0 0.2 2.1 2 0 0 2 2 2 0 LIM domain zf-Di19 PF05605.12 ORF52299 - 0.026 14.8 6.7 0.84 10.0 7.1 2.1 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-Dof PF02701.15 ORF52299 - 0.09 12.9 4.8 1.5 9.1 0.8 2.1 1 1 1 2 2 2 0 Dof domain, zinc finger CpXC PF14353.6 ORF52299 - 0.1 12.7 2.5 2.5 8.2 0.2 2.0 1 1 1 2 2 2 0 CpXC protein Zn-ribbon_8 PF09723.10 ORF52299 - 0.15 12.2 4.0 4.7 7.4 0.1 2.3 2 1 0 2 2 2 0 Zinc ribbon domain DUF1726 PF08351.11 ORF52299 - 0.18 11.8 0.1 0.31 11.0 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1726) zf-C2H2_8 PF15909.5 ORF52299 - 0.26 11.6 6.0 1.4 9.3 5.9 1.9 1 1 0 1 1 1 0 C2H2-type zinc ribbon Actin_micro PF17003.5 ORF52299 - 0.48 9.5 7.0 1.3 8.1 1.5 2.0 1 1 1 2 2 2 0 Putative actin-like family zf-C2H2_jaz PF12171.8 ORF52299 - 0.5 10.7 10.3 0.73 10.2 0.8 2.3 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF52299 - 0.59 10.6 8.0 0.48 10.9 1.5 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type FYVE PF01363.21 ORF52299 - 0.75 10.0 9.1 9.4 6.5 9.3 2.0 1 1 0 1 1 1 0 FYVE zinc finger DUF629 PF04780.12 ORF52299 - 1.3 7.4 5.6 1.2 7.5 0.8 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF629) PI3K_C2 PF00792.24 ORF5180 - 0.02 14.8 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase C2 DUF3270 PF11674.8 ORF51646 - 1.4 9.1 9.7 1.9 8.7 9.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) HGTP_anticodon PF03129.20 ORF50438 - 2.5e-10 40.4 0.0 2.7e-10 40.3 0.0 1.0 1 0 0 1 1 1 1 Anticodon binding domain DUF5119 PF17145.4 ORF50340 - 0.13 12.2 0.1 0.17 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5119) MtN3_slv PF03083.16 ORF50046 - 2e-14 53.4 0.5 2.2e-14 53.3 0.5 1.0 1 0 0 1 1 1 1 Sugar efflux transporter for intercellular exchange Y_phosphatase2 PF03162.13 ORF49767 - 0.037 13.6 1.3 0.045 13.3 0.6 1.5 1 1 1 2 2 2 0 Tyrosine phosphatase family DUF2738 PF10927.8 ORF49767 - 0.047 12.8 0.1 0.051 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2738) Rz1 PF06085.11 ORF49718 - 0.1 12.4 0.4 5.3 6.9 0.0 2.4 2 0 0 2 2 2 0 Lipoprotein Rz1 precursor ASFV_L11L PF05293.11 ORF49445 - 0.035 14.4 2.4 0.052 13.9 2.3 1.5 1 1 0 1 1 1 0 African swine fever virus (ASFV) L11L protein LysR_substrate PF03466.20 ORF49234 - 3.9e-15 55.8 0.1 4.4e-15 55.6 0.1 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Dimerisation PF08100.11 ORF49234 - 0.21 11.6 0.5 0.46 10.5 0.1 1.7 2 0 0 2 2 2 0 Dimerisation domain His_Me_b4a2 PF18275.1 ORF490 - 0.25 11.5 3.3 12 6.0 0.9 2.2 2 0 0 2 2 2 0 His-Me finger endonuclease beta4-alpha2 domain DUF5379 PF17350.2 ORF48573 - 0.06 13.6 0.0 0.062 13.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5379) UBA_5 PF16577.5 ORF48313 - 0.059 13.5 0.0 2 8.6 0.0 2.1 2 0 0 2 2 2 0 UBA domain Clathrin_propel PF01394.20 ORF48158 - 0.098 13.0 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 Clathrin propeller repeat Osmo_CC PF08946.10 ORF47153 - 0.013 15.7 1.0 0.02 15.1 1.0 1.3 1 0 0 1 1 1 0 Osmosensory transporter coiled coil HSP70 PF00012.20 ORF47063 - 8.4e-10 37.5 0.0 1e-09 37.2 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein zf-C2H2_7 PF15269.6 ORF46944 - 0.23 11.6 5.5 0.35 11.0 0.8 2.2 2 0 0 2 2 2 0 Zinc-finger DBD_Tnp_Mut PF03108.15 ORF46662 - 0.059 13.4 0.5 0.088 12.8 0.5 1.3 1 0 0 1 1 1 0 MuDR family transposase LRR_5 PF13306.6 ORF46521 - 0.017 15.1 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) PhoH PF02562.16 ORF46521 - 0.14 11.5 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 PhoH-like protein PXT1 PF15214.6 ORF45662 - 0.028 14.8 0.0 0.063 13.6 0.0 1.5 2 0 0 2 2 2 0 Peroxisomal testis-specific protein 1 SSrecog PF03531.14 ORF45368 - 1.2e-13 50.7 0.0 1.5e-13 50.5 0.0 1.1 1 0 0 1 1 1 1 Structure-specific recognition protein (SSRP1) DUF5640 PF18692.1 ORF45368 - 0.0056 16.7 0.1 0.0064 16.5 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5640) YscK PF06578.12 ORF44998 - 0.026 14.0 0.1 0.029 13.9 0.1 1.1 1 0 0 1 1 1 0 YOP proteins translocation protein K (YscK) NADH_4Fe-4S PF10589.9 ORF44922 - 0.022 14.8 0.5 0.027 14.6 0.1 1.4 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DUF1156 PF06634.12 ORF44799 - 0.0034 17.4 0.0 0.0043 17.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1156) Pox_E10 PF04805.12 ORF44067 - 1.6 8.6 3.3 2.4 8.1 3.3 1.2 1 0 0 1 1 1 0 E10-like protein conserved region Glutaredoxin PF00462.24 ORF44023 - 1.1e-07 31.9 0.1 1.5e-07 31.5 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 ORF44023 - 0.00072 20.0 0.1 0.00077 19.9 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain DUF836 PF05768.14 ORF44023 - 0.0018 18.6 0.1 0.0019 18.6 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) DSBA PF01323.20 ORF44023 - 0.0024 17.7 0.0 0.0024 17.7 0.0 1.1 1 0 0 1 1 1 1 DSBA-like thioredoxin domain SVM_signal PF12113.8 ORF44023 - 6 6.9 9.7 0.96 9.4 0.5 3.1 3 0 0 3 3 3 0 SVM protein signal sequence DUF5546 PF17700.1 ORF43789 - 0.0088 16.4 0.6 0.0096 16.3 0.6 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5546) DUF334 PF03904.13 ORF43400 - 0.046 13.3 0.2 0.048 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) Phlebovirus_NSM PF07246.11 ORF43097 - 0.067 12.6 1.0 0.085 12.2 1.0 1.0 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M Cyclophil_like PF04126.13 ORF43097 - 0.072 12.9 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Cyclophilin-like TPK_B1_binding PF04265.14 ORF42375 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain XPA_N PF01286.18 ORF42297 - 0.84 9.7 2.5 24 5.1 2.5 2.4 1 1 0 1 1 1 0 XPA protein N-terminal zf-Tim10_DDP PF02953.15 ORF41469 - 4.1e-05 23.1 0.7 5.4e-05 22.8 0.7 1.2 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Maf1 PF09174.10 ORF41369 - 0.04 14.1 0.4 0.05 13.8 0.4 1.1 1 0 0 1 1 1 0 Maf1 regulator GluR_Homer-bdg PF10606.9 ORF39137 - 0.15 12.3 0.0 0.71 10.1 0.0 1.8 2 0 0 2 2 2 0 Homer-binding domain of metabotropic glutamate receptor TEX15 PF15326.6 ORF38655 - 0.07 12.8 0.1 0.071 12.8 0.1 1.1 1 0 0 1 1 1 0 Testis expressed sequence 15 Suv3_C_1 PF18147.1 ORF37863 - 0.007 16.2 0.3 0.012 15.4 0.0 1.6 2 0 0 2 2 2 1 Suv3 C-terminal domain 1 BrnT_toxin PF04365.13 ORF37863 - 0.046 14.1 0.1 0.061 13.7 0.1 1.1 1 0 0 1 1 1 0 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system PHB_depo_C PF06850.11 ORF37694 - 0.17 11.3 0.0 0.19 11.2 0.0 1.0 1 0 0 1 1 1 0 PHB de-polymerase C-terminus RE_EcoO109I PF14511.6 ORF37694 - 0.23 11.0 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 Type II restriction endonuclease EcoO109I DUF4763 PF15960.5 ORF37694 - 0.24 10.7 0.5 0.28 10.5 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Cys_rich_FGFR PF00839.17 ORF36210 - 0.042 14.0 0.3 4.3 7.6 0.0 2.2 2 0 0 2 2 2 0 Cysteine rich repeat IP_trans PF02121.18 ORF35793 - 0.083 12.4 0.0 0.094 12.3 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol transfer protein SICA_alpha PF12887.7 ORF35702 - 0.0099 15.8 0.2 0.011 15.6 0.2 1.1 1 0 0 1 1 1 1 SICA extracellular alpha domain YhfH PF14149.6 ORF35702 - 0.016 15.2 0.4 0.031 14.3 0.4 1.5 1 0 0 1 1 1 0 YhfH-like protein HAP1_N PF04849.13 ORF35520 - 0.00047 19.5 0.0 0.0005 19.4 0.0 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region Chibby PF14645.6 ORF35520 - 0.14 12.5 1.3 0.92 9.9 1.1 2.0 1 1 0 1 1 1 0 Chibby family DUF3405 PF11885.8 ORF34786 - 0.036 12.7 0.3 0.034 12.8 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) FANCI_S2 PF14676.6 ORF34743 - 0.011 16.1 0.7 0.011 16.0 0.7 1.1 1 0 0 1 1 1 0 FANCI solenoid 2 Eno-Rase_NADH_b PF12242.8 ORF34609 - 0.24 11.2 0.1 0.24 11.2 0.1 1.7 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase TILa PF12714.7 ORF34094 - 0.65 10.0 7.6 2.6 8.0 2.2 2.2 2 0 0 2 2 2 0 TILa domain DUF4093 PF13331.6 ORF33356 - 0.06 13.8 0.6 0.066 13.7 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) TPK_B1_binding PF04265.14 ORF33301 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Ofd1_CTDD PF10637.9 ORF32523 - 0.018 14.4 0.5 0.018 14.4 0.5 1.1 1 0 0 1 1 1 0 Oxoglutarate and iron-dependent oxygenase degradation C-term Staphopain_pro PF14731.6 ORF32389 - 0.018 15.0 1.2 0.02 14.9 1.2 1.1 1 0 0 1 1 1 0 Staphopain proregion RYDR_ITPR PF01365.21 ORF31455 - 0.048 13.1 1.1 0.047 13.1 1.1 1.0 1 0 0 1 1 1 0 RIH domain OTT_1508_deam PF14441.6 ORF31412 - 0.028 14.4 0.7 0.042 13.9 0.7 1.4 1 1 0 1 1 1 0 OTT_1508-like deaminase DUF5018 PF16410.5 ORF30850 - 0.1 11.3 1.8 0.11 11.2 1.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5018) TPK_B1_binding PF04265.14 ORF30714 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain TrkA_N PF02254.18 ORF30416 - 0.00059 20.1 0.0 0.00089 19.5 0.0 1.3 1 1 0 1 1 1 1 TrkA-N domain Endotoxin_C2 PF18449.1 ORF30416 - 0.12 12.7 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Delta endotoxin Luteo_Vpg PF01659.16 ORF29925 - 0.22 11.9 8.9 0.082 13.2 6.0 1.7 1 1 1 2 2 2 0 Luteovirus putative VPg genome linked protein DUF717 PF05338.12 ORF29475 - 0.055 13.6 0.0 0.075 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF717) SHP PF03579.13 ORF28578 - 1.8 8.6 7.1 0.13 12.2 0.9 2.0 1 1 1 2 2 2 0 Small hydrophobic protein GP4 PF03010.14 ORF2823 - 0.015 15.2 0.1 0.016 15.1 0.1 1.1 1 0 0 1 1 1 0 GP4 Peptidase_M10 PF00413.24 ORF28111 - 0.12 12.2 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Matrixin Tho2 PF11262.8 ORF27993 - 0.28 10.3 2.9 0.31 10.2 2.9 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 HTH_AraC PF00165.23 ORF27166 - 5.4e-13 48.7 0.1 8.4e-13 48.1 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 ORF27166 - 2.9e-10 40.2 0.0 4.9e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MutS_IV PF05190.18 ORF27166 - 0.15 12.4 0.1 0.17 12.3 0.1 1.1 1 0 0 1 1 1 0 MutS family domain IV Clathrin_propel PF01394.20 ORF26846 - 0.098 13.0 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 Clathrin propeller repeat zf-dskA_traR PF01258.17 ORF26681 - 0.0012 18.8 0.1 0.065 13.2 0.1 2.5 2 0 0 2 2 2 2 Prokaryotic dksA/traR C4-type zinc finger DUF4408 PF14364.6 ORF26457 - 0.2 11.5 0.6 0.72 9.6 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4408) FGFR3_TM PF18123.1 ORF26022 - 1.6 8.3 5.9 5.3 6.7 1.3 2.3 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain CMV_1a PF12467.8 ORF25949 - 0.069 13.5 0.0 0.087 13.2 0.0 1.2 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein family Far-17a_AIG1 PF04750.14 ORF24939 - 0.026 13.9 1.0 0.031 13.6 1.0 1.2 1 0 0 1 1 1 0 FAR-17a/AIG1-like protein Cyt-b5 PF00173.28 ORF24381 - 1.9e-05 24.7 0.0 1.9e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Thump_like PF18096.1 ORF23989 - 0.052 13.5 0.1 0.063 13.2 0.1 1.2 1 0 0 1 1 1 0 THUMP domain-like TMA7 PF09072.10 ORF23810 - 8.6 7.3 7.0 10 7.1 0.7 2.3 2 0 0 2 2 2 0 Translation machinery associated TMA7 HECT PF00632.25 ORF23739 - 0.21 11.0 0.2 0.27 10.7 0.2 1.1 1 0 0 1 1 1 0 HECT-domain (ubiquitin-transferase) Toxin_14 PF07829.11 ORF23177 - 0.046 13.7 3.3 0.1 12.5 3.3 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein Zn_ribbon_17 PF17120.5 ORF23131 - 0.28 10.8 4.7 0.14 11.8 1.3 2.1 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type PKI PF02827.16 ORF22928 - 0.21 11.8 0.2 0.3 11.3 0.2 1.2 1 0 0 1 1 1 0 cAMP-dependent protein kinase inhibitor zf-C3HC4_3 PF13920.6 ORF22573 - 0.031 14.1 5.3 0.046 13.6 5.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) CPSase_C PF18302.1 ORF22522 - 0.15 12.5 2.1 16 6.4 0.2 2.6 2 0 0 2 2 2 0 Carbamoyl phosphate synthetase C-terminal domain NNMT_PNMT_TEMT PF01234.17 ORF22240 - 0.019 14.2 0.3 0.022 14.0 0.3 1.1 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family Pep_deformylase PF01327.21 ORF22178 - 0.076 12.6 0.4 0.085 12.5 0.4 1.1 1 0 0 1 1 1 0 Polypeptide deformylase TIP39 PF14980.6 ORF22178 - 0.09 12.7 1.0 0.38 10.7 0.1 2.1 2 0 0 2 2 2 0 TIP39 peptide DUF3937 PF13073.6 ORF21823 - 2.9 8.1 7.0 0.44 10.7 1.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3937) FANCI_S2 PF14676.6 ORF21224 - 0.011 16.1 0.7 0.011 16.0 0.7 1.1 1 0 0 1 1 1 0 FANCI solenoid 2 PqiA PF04403.13 ORF20397 - 0.02 14.8 2.1 0.027 14.3 1.9 1.3 1 1 0 1 1 1 0 Paraquat-inducible protein A PTPS_related PF10131.9 ORF19931 - 3.7 5.8 6.3 3.8 5.7 6.3 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein Maf_N PF08383.11 ORF19537 - 0.011 15.5 0.2 0.017 14.9 0.2 1.3 1 0 0 1 1 1 0 Maf N-terminal region DUF1244 PF06844.11 ORF19304 - 0.011 15.9 0.2 0.016 15.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1244) FixQ PF05545.11 ORF1866 - 1.2 9.1 3.6 2.1 8.4 3.6 1.4 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ GEP5 PF17053.5 ORF18529 - 0.037 13.9 0.0 0.037 13.9 0.0 1.1 1 0 0 1 1 1 0 Genetic interactor of prohibitin 5 PA28_alpha PF02251.18 ORF18529 - 0.098 12.7 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Proteasome activator pa28 alpha subunit DUF5379 PF17350.2 ORF17605 - 0.06 13.6 0.0 0.062 13.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5379) Mononeg_mRNAcap PF14318.6 ORF17203 - 0.0012 18.1 0.1 0.0012 18.1 0.1 1.0 1 0 0 1 1 1 1 Mononegavirales mRNA-capping region V Sec61_beta PF03911.16 ORF16907 - 7.6e-09 35.5 1.5 9.6e-09 35.1 1.5 1.2 1 0 0 1 1 1 1 Sec61beta family Spore_YtfJ PF09579.10 ORF16907 - 0.021 15.0 0.4 0.025 14.7 0.4 1.2 1 0 0 1 1 1 0 Sporulation protein YtfJ (Spore_YtfJ) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks337.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks337.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks337.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks337.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:15 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RNA_pol_Rpc4 PF05132.14 ORF16293 - 2.5e-07 31.2 0.3 6.4e-07 29.9 0.3 1.6 1 1 1 2 2 2 1 RNA polymerase III RPC4 PITH PF06201.13 ORF15792 - 1.4e-12 48.0 0.0 1.6e-12 47.9 0.0 1.0 1 0 0 1 1 1 1 PITH domain Peptidase_M10 PF00413.24 ORF15643 - 0.12 12.2 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Matrixin TPK_B1_binding PF04265.14 ORF15337 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Calsarcin PF05556.11 ORF152445 - 0.032 13.8 0.0 0.034 13.7 0.0 1.0 1 0 0 1 1 1 0 Calcineurin-binding protein (Calsarcin) Ac110_PIF PF07280.11 ORF152275 - 0.057 13.2 0.2 0.093 12.5 0.2 1.3 1 0 0 1 1 1 0 Per os infectivity factor AC110 Paramyxo_C PF01692.18 ORF15206 - 0.12 11.7 0.1 0.14 11.5 0.1 1.1 1 0 0 1 1 1 0 Paramyxovirus non-structural protein C NHS PF15273.6 ORF151472 - 0.15 11.1 2.1 0.18 10.9 2.1 1.0 1 0 0 1 1 1 0 NHS-like Mut7-C PF01927.16 ORF151053 - 0.018 15.1 0.0 0.019 15.1 0.0 1.0 1 0 0 1 1 1 0 Mut7-C RNAse domain Med26 PF08711.11 ORF150698 - 0.01 15.8 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 0 TFIIS helical bundle-like domain FYVE PF01363.21 ORF150510 - 2.8e-14 53.0 15.9 3.4e-14 52.7 15.9 1.1 1 0 0 1 1 1 1 FYVE zinc finger FYVE_2 PF02318.16 ORF150510 - 0.014 15.6 12.9 0.017 15.3 12.9 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger PhnA_Zn_Ribbon PF08274.12 ORF150510 - 2.9 7.9 14.3 0.4 10.7 1.9 2.6 2 1 1 3 3 3 0 PhnA Zinc-Ribbon HopW1-1 PF15457.6 ORF15003 - 0.14 11.4 1.1 0.15 11.3 1.1 1.1 1 0 0 1 1 1 0 Type III T3SS secreted effector HopW1-1/HopPmaA DNA_pol3_theta PF06440.11 ORF148830 - 0.14 11.9 0.8 0.2 11.3 0.8 1.3 1 0 0 1 1 1 0 DNA polymerase III, theta subunit PanZ PF12568.8 ORF148636 - 0.095 12.4 0.2 0.13 12.0 0.2 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ TFIIS_C PF01096.18 ORF146656 - 0.0017 18.1 10.2 0.076 12.9 10.2 2.6 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) TFIIS_M PF07500.14 ORF146656 - 0.11 13.0 2.8 0.13 12.7 2.8 1.2 1 0 0 1 1 1 0 Transcription factor S-II (TFIIS), central domain OrfB_Zn_ribbon PF07282.11 ORF146656 - 1.3 9.0 6.5 3.1 7.8 0.6 2.2 1 1 0 2 2 2 0 Putative transposase DNA-binding domain BppU_N PF10651.9 ORF146259 - 0.13 12.0 1.1 0.27 10.9 0.5 1.7 1 1 1 2 2 2 0 BppU N-terminal domain Resistin PF06954.11 ORF145915 - 4.4 7.9 14.2 4.1 8.0 13.7 1.3 1 1 0 1 1 1 0 Resistin DUF2973 PF11189.8 ORF145198 - 2.6 8.2 7.8 0.3 11.2 2.8 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2973) Myticin-prepro PF10690.9 ORF144563 - 0.018 15.2 6.7 0.023 14.9 6.7 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel DEC1 PF15859.5 ORF143961 - 0.16 12.0 0.1 0.21 11.6 0.1 1.3 1 0 0 1 1 1 0 Deleted in esophageal cancer 1 family Adipogenin PF15202.6 ORF14389 - 1.8 8.7 5.0 0.48 10.5 2.1 1.6 2 0 0 2 2 2 0 Adipogenin ILVD_EDD PF00920.21 ORF143658 - 0.089 11.4 0.4 0.093 11.3 0.4 1.0 1 0 0 1 1 1 0 Dehydratase family DUF2545 PF10810.8 ORF143481 - 2.7e-42 142.8 12.0 2.9e-42 142.7 12.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2545) Aa_trans PF01490.18 ORF143481 - 0.23 10.1 9.4 0.27 9.9 9.4 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein ST7 PF04184.12 ORF143481 - 1.9 6.9 4.2 2.1 6.7 4.2 1.0 1 0 0 1 1 1 0 ST7 protein YecM PF06185.12 ORF142764 - 0.083 12.6 0.2 0.1 12.3 0.2 1.2 1 1 0 1 1 1 0 YecM protein TPK_B1_binding PF04265.14 ORF141998 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain DUF1272 PF06906.11 ORF141572 - 0.61 10.2 5.3 1.2 9.3 5.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) Luteo_Vpg PF01659.16 ORF140809 - 0.22 11.9 8.9 0.082 13.2 6.0 1.7 1 1 1 2 2 2 0 Luteovirus putative VPg genome linked protein DUF1461 PF07314.11 ORF140741 - 0.079 12.9 0.1 0.094 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) SLT_beta PF02258.16 ORF140736 - 0.031 14.3 0.1 0.057 13.4 0.1 1.5 1 0 0 1 1 1 0 Shiga-like toxin beta subunit CreD PF06123.12 ORF140550 - 0.001 18.0 0.1 0.001 18.0 0.1 1.0 1 0 0 1 1 1 1 Inner membrane protein CreD DUF678 PF05077.12 ORF140550 - 0.18 12.0 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF678) DUF4722 PF15849.5 ORF139815 - 0.019 14.7 0.0 0.019 14.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4722) PDR_CDR PF06422.12 ORF139510 - 0.012 15.5 1.1 0.015 15.2 1.1 1.2 1 0 0 1 1 1 0 CDR ABC transporter Bmt2 PF11968.8 ORF139508 - 0.048 13.5 1.4 0.049 13.5 1.4 1.0 1 0 0 1 1 1 0 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 Clathrin_propel PF01394.20 ORF138749 - 0.098 13.0 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 Clathrin propeller repeat zf-Tim10_DDP PF02953.15 ORF138096 - 7.3e-09 35.1 8.1 9.1e-09 34.8 8.1 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger PKI PF02827.16 ORF137528 - 0.21 11.8 0.2 0.3 11.3 0.2 1.2 1 0 0 1 1 1 0 cAMP-dependent protein kinase inhibitor PH_6 PF15406.6 ORF137231 - 0.074 13.3 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain Dynactin_p22 PF07426.11 ORF136851 - 0.031 14.2 0.6 0.033 14.0 0.6 1.2 1 0 0 1 1 1 0 Dynactin subunit p22 efb-c PF12199.8 ORF136694 - 0.092 12.8 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Extracellular fibrinogen binding protein C terminal p31comet PF06581.12 ORF136212 - 0.061 12.5 0.4 0.059 12.5 0.4 1.1 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding Thump_like PF18096.1 ORF135655 - 0.052 13.5 0.1 0.063 13.2 0.1 1.2 1 0 0 1 1 1 0 THUMP domain-like DUF4658 PF15555.6 ORF134396 - 0.03 14.5 0.4 0.038 14.1 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) Phlebovirus_G1 PF07243.11 ORF134396 - 0.33 9.3 4.3 0.33 9.3 4.3 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Glu-tRNAGln PF02686.15 ORF134047 - 0.086 13.2 0.7 0.2 12.0 0.3 1.7 2 0 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit Mntp PF02659.15 ORF133930 - 0.013 15.3 0.7 0.014 15.2 0.7 1.1 1 0 0 1 1 1 0 Putative manganese efflux pump Spidroin_N PF16763.5 ORF133039 - 0.0027 17.7 0.4 0.0036 17.3 0.3 1.3 1 1 0 1 1 1 1 Major ampullate spidroin 1, spider silk protein 1, N-term CREPT PF16566.5 ORF133039 - 0.029 14.6 5.2 0.029 14.5 5.2 1.0 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour TetR_C_13 PF16925.5 ORF133039 - 0.053 13.5 0.2 0.06 13.3 0.2 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain GvpL_GvpF PF06386.11 ORF133039 - 0.1 12.5 2.4 0.1 12.5 2.4 1.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF DUF1640 PF07798.11 ORF133039 - 0.11 12.5 7.3 0.26 11.3 7.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) HU-CCDC81_bac_2 PF18175.1 ORF133039 - 0.25 11.2 2.6 1.6 8.6 0.8 2.1 1 1 1 2 2 2 0 CCDC81-like prokaryotic HU domain 2 DUF4435 PF14491.6 ORF133039 - 0.42 10.5 7.6 0.48 10.3 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) DUF4407 PF14362.6 ORF133039 - 0.56 9.5 5.3 0.61 9.4 5.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YtxH PF12732.7 ORF133039 - 0.57 10.7 9.0 6.3 7.4 7.2 2.0 1 1 0 1 1 1 0 YtxH-like protein PIN_8 PF18476.1 ORF133039 - 0.59 10.0 8.2 0.64 9.8 8.2 1.0 1 0 0 1 1 1 0 PIN like domain ArAE_2_N PF10337.9 ORF133039 - 0.67 8.9 3.3 0.74 8.8 3.3 1.0 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal YkuI_C PF10388.9 ORF133039 - 0.67 9.7 5.9 0.67 9.7 5.5 1.3 1 1 0 1 1 1 0 EAL-domain associated signalling protein domain LMBR1 PF04791.16 ORF133039 - 8.9 5.1 6.6 9.5 5.0 6.6 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein FBP_C PF16571.5 ORF133038 - 0.17 11.4 4.0 1.6 8.2 4.0 1.9 1 1 0 1 1 1 0 FBP C-terminal treble-clef zinc-finger DUF4704 PF15787.5 ORF133009 - 0.33 10.1 6.8 0.17 11.1 1.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4704) fn3_2 PF16893.5 ORF132643 - 0.014 15.5 0.1 0.018 15.2 0.1 1.2 1 0 0 1 1 1 0 Fibronectin type III domain DUF2777 PF10949.8 ORF13224 - 0.041 13.6 0.0 0.056 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) DHNA PF04038.12 ORF131805 - 0.038 14.5 1.6 0.041 14.4 1.6 1.1 1 0 0 1 1 1 0 Dihydroneopterin aldolase PID PF00640.23 ORF131805 - 0.31 11.0 5.9 0.4 10.7 5.9 1.3 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) RHH_1 PF01402.21 ORF130981 - 0.023 14.6 0.4 0.035 14.1 0.4 1.3 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family RHH_3 PF12651.7 ORF130981 - 0.056 13.4 0.2 0.096 12.7 0.2 1.4 1 0 0 1 1 1 0 Ribbon-helix-helix domain GluR_Homer-bdg PF10606.9 ORF130096 - 0.15 12.3 0.0 0.71 10.1 0.0 1.8 2 0 0 2 2 2 0 Homer-binding domain of metabotropic glutamate receptor WBP-1 PF11669.8 ORF129966 - 0.059 14.0 5.9 0.071 13.8 5.9 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 DUF3789 PF12664.7 ORF129562 - 0.41 10.4 2.5 0.59 9.9 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3789) Cytochrome-c551 PF10643.9 ORF129165 - 0.14 11.7 0.5 0.14 11.7 0.5 1.1 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 YccF PF03733.13 ORF129165 - 0.55 11.0 5.8 0.2 12.4 3.0 1.7 1 1 1 2 2 2 0 Inner membrane component domain CBM_14 PF01607.24 ORF129060 - 0.073 13.3 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Chitin binding Peritrophin-A domain TMEM208_SND2 PF05620.11 ORF129027 - 0.066 13.0 0.0 0.081 12.7 0.0 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 WAP PF00095.21 ORF127693 - 0.024 15.0 1.1 0.032 14.6 1.1 1.3 1 0 0 1 1 1 0 WAP-type (Whey Acidic Protein) 'four-disulfide core' Complex1_51K PF01512.17 ORF127467 - 0.11 12.3 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABC_membrane PF00664.23 ORF12739 - 4.4e-11 42.9 5.3 4.6e-11 42.9 5.3 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region BORCS8 PF10167.9 ORF12720 - 0.0078 16.2 0.6 0.0093 15.9 0.6 1.1 1 0 0 1 1 1 1 BLOC-1-related complex sub-unit 8 SKA2 PF16740.5 ORF12720 - 0.15 11.8 5.5 0.14 12.0 2.5 1.9 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 CENP-W PF15510.6 ORF127095 - 0.029 14.6 0.1 0.033 14.4 0.1 1.1 1 0 0 1 1 1 0 CENP-W protein DUF3531 PF12049.8 ORF126781 - 0.22 11.5 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3531) zf-Tim10_DDP PF02953.15 ORF1264 - 5.2e-09 35.6 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF1264 - 0.057 14.0 0.1 0.073 13.7 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 EGF_Tenascin PF18720.1 ORF12633 - 0.061 13.4 1.3 0.061 13.4 1.3 1.7 2 0 0 2 2 2 0 Tenascin EGF domain Mit_KHE1 PF10173.9 ORF125996 - 0.077 13.1 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related PsaF PF17550.2 ORF125756 - 0.017 14.6 0.4 0.022 14.2 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function Gaa1 PF04114.14 ORF124075 - 0.43 9.5 5.1 0.42 9.6 5.1 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component zf-Tim10_DDP PF02953.15 ORF123636 - 5.2e-09 35.6 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF123636 - 0.057 14.0 0.1 0.073 13.7 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 DUF2076 PF09849.9 ORF121044 - 2.9 7.9 4.2 3.1 7.8 4.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DNA_repr_REX1B PF14966.6 ORF120260 - 0.036 14.7 0.6 0.043 14.5 0.6 1.1 1 0 0 1 1 1 0 DNA repair REX1-B P3A PF08727.11 ORF120260 - 0.062 12.7 0.7 0.11 11.9 0.1 1.7 2 0 0 2 2 2 0 Poliovirus 3A protein like BLOC1_2 PF10046.9 ORF119809 - 0.018 15.3 0.1 0.024 14.9 0.1 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TPK_B1_binding PF04265.14 ORF11927 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain TGBp3 PF02495.17 ORF117847 - 0.017 14.7 0.4 0.025 14.2 0.4 1.4 1 0 0 1 1 1 0 Triple gene block 3 DUF805 PF05656.14 ORF116832 - 0.75 10.2 6.5 1 9.8 6.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF805) Pex2_Pex12 PF04757.14 ORF116797 - 0.014 15.0 0.3 0.017 14.8 0.3 1.1 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region Cep3 PF16846.5 ORF1167 - 0.0099 14.4 2.0 0.011 14.2 2.0 1.0 1 0 0 1 1 1 1 Centromere DNA-binding protein complex CBF3 subunit B DUF2848 PF11010.8 ORF116324 - 0.071 12.7 0.0 0.08 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2848) Olduvai PF06758.13 ORF116013 - 0.068 13.4 1.2 0.15 12.4 1.2 1.5 1 0 0 1 1 1 0 Olduvai domain Kelch_6 PF13964.6 ORF116013 - 0.068 13.5 0.3 0.11 12.9 0.2 1.4 1 1 0 1 1 1 0 Kelch motif zf-Tim10_DDP PF02953.15 ORF115933 - 5.2e-09 35.6 8.0 6.5e-09 35.3 8.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Corona_NS2 PF04753.12 ORF115933 - 0.057 14.0 0.1 0.073 13.7 0.1 1.1 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 IRS PF02174.17 ORF115776 - 0.033 14.1 0.6 0.047 13.6 0.5 1.3 1 1 0 1 1 1 0 PTB domain (IRS-1 type) TRPM_tetra PF16519.5 ORF115776 - 0.044 13.9 1.4 0.056 13.6 1.4 1.1 1 0 0 1 1 1 0 Tetramerisation domain of TRPM DUF2116 PF09889.9 ORF115776 - 1.9 8.5 11.3 0.37 10.8 3.4 2.3 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Mei5_like PF17021.5 ORF115343 - 0.012 15.6 2.4 0.015 15.3 2.4 1.1 1 0 0 1 1 1 0 Putative double-strand recombination repair-like Wzy_C PF04932.15 ORF115264 - 0.031 13.9 0.0 0.036 13.7 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase Acyl-CoA_ox_N PF14749.6 ORF115258 - 0.12 13.0 0.1 0.17 12.4 0.1 1.2 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal RasGEF_N_2 PF14663.6 ORF114705 - 0.05 14.0 0.2 0.057 13.8 0.2 1.2 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Maf_N PF08383.11 ORF114451 - 0.011 15.5 0.2 0.017 14.9 0.2 1.3 1 0 0 1 1 1 0 Maf N-terminal region TB2_DP1_HVA22 PF03134.19 ORF113934 - 0.18 11.8 2.5 0.54 10.2 2.5 2.1 1 1 0 1 1 1 0 TB2/DP1, HVA22 family Peptidase_C42 PF05533.12 ORF113323 - 0.019 15.0 0.0 0.022 14.8 0.0 1.1 1 0 0 1 1 1 0 Beet yellows virus-type papain-like endopeptidase C42 PQQ_3 PF13570.6 ORF113047 - 9.7e-05 22.7 0.3 0.014 15.9 0.0 2.7 2 1 1 3 3 3 2 PQQ-like domain DUF5508 PF17621.2 ORF113047 - 0.13 11.4 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5508) L27_2 PF09045.10 ORF112998 - 0.043 13.8 1.5 0.048 13.6 0.1 1.8 2 1 0 2 2 2 0 L27_2 OrfB_Zn_ribbon PF07282.11 ORF112956 - 0.14 12.1 1.3 0.19 11.7 1.3 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain APG9 PF04109.16 ORF112879 - 0.021 13.8 0.1 0.024 13.7 0.1 1.0 1 0 0 1 1 1 0 Autophagy protein Apg9 APG12 PF04110.13 ORF112855 - 0.068 13.6 0.6 0.079 13.4 0.6 1.2 1 0 0 1 1 1 0 Ubiquitin-like autophagy protein Apg12 TMEM52 PF14979.6 ORF112474 - 4.5 7.2 6.4 0.15 12.0 0.7 1.6 2 0 0 2 2 2 0 Transmembrane 52 Luteo_Vpg PF01659.16 ORF111998 - 0.22 11.9 8.9 0.082 13.2 6.0 1.7 1 1 1 2 2 2 0 Luteovirus putative VPg genome linked protein TPK_B1_binding PF04265.14 ORF11198 - 0.024 14.4 0.3 0.18 11.6 0.2 2.1 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain zf-nanos PF05741.13 ORF11187 - 0.15 12.4 1.0 3.8 7.8 0.1 2.1 2 0 0 2 2 2 0 Nanos RNA binding domain TMEM52 PF14979.6 ORF111864 - 4.5 7.2 6.4 0.15 12.0 0.7 1.6 2 0 0 2 2 2 0 Transmembrane 52 DBD_Tnp_Mut PF03108.15 ORF110977 - 0.059 13.4 0.5 0.088 12.8 0.5 1.3 1 0 0 1 1 1 0 MuDR family transposase DUF5588 PF17826.1 ORF110866 - 0.12 11.3 0.7 0.14 11.1 0.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5588) EB_dh PF09459.10 ORF110457 - 0.14 12.1 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 Ethylbenzene dehydrogenase Peptidase_M10 PF00413.24 ORF110221 - 0.12 12.2 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Matrixin UL141 PF16758.5 ORF110089 - 0.019 14.7 0.6 0.022 14.5 0.6 1.1 1 0 0 1 1 1 0 Herpes-like virus membrane glycoprotein UL141 TYW3 PF02676.14 ORF109880 - 0.086 12.2 1.2 0.095 12.0 1.2 1.0 1 0 0 1 1 1 0 Methyltransferase TYW3 DUF4250 PF14056.6 ORF109831 - 0.073 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) DUF5345 PF17280.2 ORF109831 - 1.7 8.7 9.8 2.4 8.2 9.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5345) Imm71 PF15602.6 ORF109177 - 0.23 11.5 1.4 1.9 8.5 0.2 2.0 1 1 1 2 2 2 0 Immunity protein 71 PMAIP1 PF15150.6 ORF108730 - 0.027 14.3 0.0 0.042 13.7 0.0 1.3 1 0 0 1 1 1 0 Phorbol-12-myristate-13-acetate-induced DUF1270 PF06900.11 ORF106779 - 1 9.8 8.8 0.25 11.7 2.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1270) Pro-rich_19 PF15455.6 ORF106652 - 0.26 10.4 6.3 0.3 10.2 6.3 1.0 1 0 0 1 1 1 0 Proline-rich 19 Mntp PF02659.15 ORF106101 - 0.013 15.3 0.7 0.014 15.2 0.7 1.1 1 0 0 1 1 1 0 Putative manganese efflux pump DUF4113 PF13438.6 ORF105064 - 0.056 13.5 0.1 0.094 12.8 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4113) NrfD PF03916.14 ORF103905 - 2.4e-22 80.0 2.4 2.6e-22 79.9 2.4 1.0 1 0 0 1 1 1 1 Polysulphide reductase, NrfD DUF3405 PF11885.8 ORF102893 - 0.33 9.5 4.3 0.37 9.3 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) FANCI_S2 PF14676.6 ORF100785 - 0.0048 17.2 0.4 0.0052 17.1 0.4 1.1 1 0 0 1 1 1 1 FANCI solenoid 2 CPV_Polyhedrin PF17515.2 ORF10015 - 0.14 11.5 0.1 0.16 11.3 0.1 1.0 1 0 0 1 1 1 0 Cypovirus polyhedrin Dsl1_C PF11989.8 NODE_67659_length_235_cov_0.790000_g59718_i0forward_frame_1 - 0.11 12.2 2.4 0.12 12.1 2.4 1.1 1 0 0 1 1 1 0 Retrograde transport protein Dsl1 C terminal DUF929 PF06053.11 NODE_67658_length_235_cov_0.790000_g59717_i0reverse_frame_1 - 0.13 11.5 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) Ephrin_rec_like PF07699.13 NODE_67655_length_235_cov_0.820000_g59714_i0reverse_frame_1 - 0.0008 19.1 1.4 0.0008 19.1 1.4 1.9 2 1 0 2 2 2 1 Putative ephrin-receptor like DUF2318 PF10080.9 NODE_67655_length_235_cov_0.820000_g59714_i0reverse_frame_1 - 0.013 15.6 1.6 0.016 15.3 1.6 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) DUF3797 PF12677.7 NODE_67655_length_235_cov_0.820000_g59714_i0reverse_frame_1 - 0.014 15.2 1.2 0.014 15.2 1.2 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF3797) Sp38 PF07354.12 NODE_67655_length_235_cov_0.820000_g59714_i0reverse_frame_1 - 0.024 14.1 3.0 0.063 12.7 1.6 1.9 2 0 0 2 2 2 0 Zona-pellucida-binding protein (Sp38) TNFR_c6 PF00020.18 NODE_67655_length_235_cov_0.820000_g59714_i0reverse_frame_1 - 0.027 14.8 4.6 0.28 11.6 0.6 2.4 1 1 1 2 2 2 0 TNFR/NGFR cysteine-rich region ApoB100_C PF12491.8 NODE_67653_length_235_cov_0.915000_g59712_i0reverse_frame_1 - 0.0026 17.7 1.0 0.0046 16.9 1.0 1.3 1 0 0 1 1 1 1 Apolipoprotein B100 C terminal DUF4763 PF15960.5 NODE_67653_length_235_cov_0.915000_g59712_i0reverse_frame_1 - 0.048 13.0 0.7 0.053 12.8 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Reo_sigmaC_M PF17750.1 NODE_67652_length_235_cov_0.925000_g59711_i0reverse_frame_1 - 0.1 12.5 0.3 0.18 11.7 0.3 1.4 1 0 0 1 1 1 0 Reovirus sigma C capsid protein triple beta spiral Cys_rich_VLP PF14194.6 NODE_67652_length_235_cov_0.925000_g59711_i0forward_frame_1 - 0.11 12.6 1.8 1.5 9.0 0.1 2.1 2 0 0 2 2 2 0 Cysteine-rich VLP zinc_ribbon_12 PF11331.8 NODE_67645_length_235_cov_0.995000_g59704_i0reverse_frame_1 - 0.07 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Probable zinc-ribbon domain Pkinase PF00069.25 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 3.8e-13 49.4 0.1 4.5e-13 49.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Seadorna_VP7 PF07387.11 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 8.5e-06 25.0 0.0 8.6e-06 25.0 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 4.2e-05 23.6 0.0 4.7e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 4.9e-05 22.7 0.0 4.9e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 0.00079 18.5 0.1 0.00081 18.4 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Choline_kinase PF01633.20 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 0.086 12.4 0.1 0.098 12.2 0.1 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase YrbL-PhoP_reg PF10707.9 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_1 - 0.1 12.1 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Glyco_hydro_42C PF08533.10 NODE_67634_length_235_cov_1.145000_g59693_i0forward_frame_1 - 0.074 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain CBM_2 PF00553.19 NODE_67629_length_235_cov_1.175000_g59688_i0reverse_frame_1 - 0.12 12.7 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Cellulose binding domain Mit_KHE1 PF10173.9 NODE_67628_length_235_cov_1.175000_g59687_i0reverse_frame_1 - 0.029 14.5 0.4 0.032 14.3 0.4 1.0 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related HMG_box PF00505.19 NODE_67616_length_235_cov_1.235000_g59675_i0reverse_frame_1 - 0.051 14.0 0.0 0.063 13.7 0.0 1.1 1 0 0 1 1 1 0 HMG (high mobility group) box LPD39 PF18858.1 NODE_67616_length_235_cov_1.235000_g59675_i0reverse_frame_1 - 0.12 12.5 0.1 0.14 12.3 0.1 1.0 1 0 0 1 1 1 0 Large polyvalent protein associated domain 39 DUF281 PF03436.13 NODE_67615_length_235_cov_1.245000_g59674_i0reverse_frame_1 - 0.073 13.5 0.7 0.14 12.6 0.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF281) PAAR_motif PF05488.13 NODE_67615_length_235_cov_1.245000_g59674_i0reverse_frame_1 - 0.11 12.7 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 PAAR motif Prenylcys_lyase PF07156.14 NODE_67612_length_235_cov_1.260000_g59671_i0forward_frame_1 - 0.095 11.8 0.0 0.1 11.7 0.0 1.0 1 0 0 1 1 1 0 Prenylcysteine lyase GRIM-19 PF06212.12 NODE_67611_length_235_cov_1.265000_g59670_i0reverse_frame_1 - 0.0032 17.4 0.1 0.0039 17.1 0.1 1.0 1 0 0 1 1 1 1 GRIM-19 protein ANAPC4_WD40 PF12894.7 NODE_67603_length_235_cov_1.350000_g59662_i0forward_frame_1 - 0.042 14.1 0.0 0.06 13.7 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 NODE_67603_length_235_cov_1.350000_g59662_i0forward_frame_1 - 0.079 13.9 0.0 0.15 13.0 0.0 1.4 1 0 0 1 1 1 0 WD domain, G-beta repeat NAC PF01849.18 NODE_67599_length_235_cov_1.395000_g59658_i0reverse_frame_1 - 0.0085 16.0 0.1 0.012 15.6 0.1 1.4 1 0 0 1 1 1 1 NAC domain DUF5472 PF17566.2 NODE_67598_length_235_cov_1.420000_g59657_i0reverse_frame_1 - 1 9.3 3.7 0.77 9.8 2.2 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5472) Cyclin PF08613.11 NODE_67596_length_235_cov_1.420000_g59655_i0forward_frame_1 - 0.21 11.9 2.5 0.23 11.8 2.5 1.1 1 0 0 1 1 1 0 Cyclin DUF4637 PF15470.6 NODE_67590_length_235_cov_1.470000_g59649_i0forward_frame_1 - 0.11 12.2 0.2 0.13 12.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF1699 PF08004.11 NODE_67589_length_235_cov_1.470000_g59648_i0forward_frame_1 - 0.018 14.8 0.9 0.022 14.5 0.8 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1699) DUF3970 PF13113.6 NODE_67587_length_235_cov_1.495000_g59646_i0forward_frame_1 - 4.2 7.7 6.5 4.5 7.6 3.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3970) DUF2102 PF09875.9 NODE_67582_length_235_cov_1.545000_g59641_i0reverse_frame_1 - 6.5 6.5 6.4 4 7.2 4.7 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) Saf_2TM PF18303.1 NODE_67581_length_235_cov_1.550000_g59640_i0forward_frame_1 - 0.13 11.9 0.2 0.14 11.8 0.2 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain DUF2270 PF10028.9 NODE_67581_length_235_cov_1.550000_g59640_i0forward_frame_1 - 0.22 11.1 0.5 0.21 11.2 0.5 1.2 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2270) UPF0225 PF17775.1 NODE_67574_length_235_cov_1.600000_g59633_i0reverse_frame_1 - 0.068 14.0 0.0 0.087 13.7 0.0 1.2 1 0 0 1 1 1 0 UPF0225 domain zf-CHC2 PF01807.20 NODE_67570_length_235_cov_1.645000_g59629_i0forward_frame_1 - 0.044 13.6 0.0 0.05 13.4 0.0 1.1 1 0 0 1 1 1 0 CHC2 zinc finger Col_cuticle_N PF01484.17 NODE_67567_length_235_cov_1.685000_g59626_i0forward_frame_1 - 0.3 11.2 6.3 0.72 10.0 6.3 1.7 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain DUF3413 PF11893.8 NODE_67567_length_235_cov_1.685000_g59626_i0forward_frame_1 - 0.33 10.1 5.6 0.57 9.3 5.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3413) DUF11 PF01345.18 NODE_67566_length_235_cov_1.695000_g59625_i0reverse_frame_1 - 0.075 13.3 0.7 0.087 13.1 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF11 Na_Pi_cotrans PF02690.15 NODE_67559_length_235_cov_1.795000_g59618_i0forward_frame_1 - 5.9e-06 26.4 0.2 6.4e-06 26.3 0.2 1.1 1 0 0 1 1 1 1 Na+/Pi-cotransporter TIC20 PF16166.5 NODE_67555_length_235_cov_1.820000_g59614_i0forward_frame_1 - 0.067 13.0 0.2 0.076 12.8 0.2 1.1 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like DUF3267 PF11667.8 NODE_67551_length_235_cov_1.890000_g59610_i0forward_frame_1 - 0.068 13.5 0.3 0.084 13.2 0.3 1.3 1 1 0 1 1 1 0 Putative zincin peptidase Pox_F17 PF04767.12 NODE_67551_length_235_cov_1.890000_g59610_i0forward_frame_1 - 0.096 13.2 0.2 0.12 12.8 0.2 1.2 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein Ion_trans PF00520.31 NODE_67541_length_235_cov_2.075000_g59600_i0forward_frame_1 - 0.0042 16.4 3.8 0.0042 16.4 3.8 1.4 1 1 0 1 1 1 1 Ion transport protein OSTbeta PF15048.6 NODE_67539_length_235_cov_2.095000_g59598_i0forward_frame_1 - 0.23 11.6 0.1 0.3 11.2 0.1 1.1 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein GIT_SHD PF08518.11 NODE_67538_length_235_cov_2.120000_g59597_i0reverse_frame_1 - 0.099 12.3 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Spa2 homology domain (SHD) of GIT Spike_rec_bind PF09408.10 NODE_67537_length_235_cov_2.180000_g59596_i0forward_frame_1 - 0.015 15.1 0.7 0.016 14.9 0.7 1.0 1 0 0 1 1 1 0 Spike receptor binding domain LZ3wCH PF18517.1 NODE_67536_length_235_cov_2.190000_g59595_i0forward_frame_1 - 0.022 14.8 0.1 0.032 14.3 0.1 1.2 1 0 0 1 1 1 0 Leucine zipper with capping helix domain ST7 PF04184.12 NODE_67535_length_235_cov_2.190000_g59594_i0forward_frame_1 - 0.05 12.1 0.2 0.053 12.0 0.2 1.0 1 0 0 1 1 1 0 ST7 protein CUTL PF16557.5 NODE_67535_length_235_cov_2.190000_g59594_i0forward_frame_1 - 0.23 11.7 3.7 0.42 10.8 3.7 1.6 1 1 0 1 1 1 0 CUT1-like DNA-binding domain of SATB DUF4239 PF14023.6 NODE_67532_length_235_cov_2.235000_g59591_i0forward_frame_1 - 0.61 9.8 5.5 0.71 9.6 5.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF390 PF04094.14 NODE_67531_length_235_cov_2.255000_g59590_i0reverse_frame_1 - 0.58 8.4 13.2 0.62 8.3 13.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) Rrn6 PF10214.9 NODE_67531_length_235_cov_2.255000_g59590_i0reverse_frame_1 - 3.8 5.9 7.5 4.3 5.7 7.5 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF3987 PF13148.6 NODE_67531_length_235_cov_2.255000_g59590_i0reverse_frame_1 - 4.3 6.2 11.8 4.9 6.1 11.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) ArAE_2_N PF10337.9 NODE_67526_length_235_cov_2.390000_g59585_i0reverse_frame_1 - 0.03 13.4 0.0 0.03 13.4 0.0 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal ZnuA PF01297.17 NODE_67522_length_235_cov_2.465000_g59581_i0forward_frame_1 - 2e-09 37.3 0.0 2e-09 37.2 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Aldolase_II PF00596.21 NODE_67513_length_235_cov_2.765000_g59572_i0forward_frame_1 - 1.7e-15 57.5 0.6 1.9e-15 57.3 0.6 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain NAT PF04768.13 NODE_67511_length_235_cov_2.790000_g59570_i0reverse_frame_1 - 0.071 12.8 4.4 0.072 12.7 4.4 1.2 1 1 0 1 1 1 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase Guanylate_cyc PF00211.20 NODE_67504_length_235_cov_3.035000_g59563_i0reverse_frame_1 - 0.001 18.7 0.0 0.0011 18.6 0.0 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain CCER1 PF15482.6 NODE_67503_length_235_cov_3.110000_g59562_i0reverse_frame_1 - 0.54 10.1 5.5 0.57 10.0 5.5 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 CHDCT2 PF08074.11 NODE_67493_length_235_cov_14.980000_g59552_i0reverse_frame_1 - 0.037 14.2 0.2 0.043 14.0 0.2 1.0 1 0 0 1 1 1 0 CHDCT2 (NUC038) domain PikAIV_N PF18605.1 NODE_67491_length_235_cov_16.110000_g59550_i0reverse_frame_1 - 1.1 8.9 5.1 0.49 10.0 2.3 1.8 2 0 0 2 2 2 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Opacity PF02462.15 NODE_67491_length_235_cov_16.110000_g59550_i0forward_frame_1 - 0.15 12.2 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Opacity family porin protein PP2C PF00481.21 NODE_67488_length_235_cov_22.110000_g59547_i0reverse_frame_1 - 8.6e-07 28.8 0.0 1e-06 28.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DUF2572 PF10833.8 NODE_67484_length_235_cov_28.490000_g59543_i0reverse_frame_1 - 0.0042 16.9 3.7 0.0049 16.7 3.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2572) DUF2208 PF09973.9 NODE_67484_length_235_cov_28.490000_g59543_i0forward_frame_1 - 4.3 6.9 10.1 4.8 6.7 10.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) DUF4528 PF15031.6 NODE_67480_length_235_cov_34.120000_g59539_i0reverse_frame_1 - 0.086 12.9 0.1 0.1 12.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) Neurokinin_B PF03823.14 NODE_67478_length_235_cov_37.610000_g59537_i0reverse_frame_1 - 0.0018 18.3 0.2 0.003 17.6 0.2 1.4 1 0 0 1 1 1 1 Neurokinin B DUF2890 PF11081.8 NODE_67475_length_235_cov_41.880000_g59534_i0forward_frame_1 - 0.031 14.4 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) PTPS_related PF10131.9 NODE_67471_length_235_cov_44.460000_g59530_i0forward_frame_1 - 0.048 12.0 0.2 0.049 12.0 0.2 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein PilW PF16074.5 NODE_67465_length_235_cov_47.445000_g59524_i0reverse_frame_1 - 0.11 12.4 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Type IV Pilus-assembly protein W DUF2809 PF10990.8 NODE_67462_length_235_cov_48.750000_g59521_i0reverse_frame_1 - 0.096 13.4 0.0 16 6.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2809) TMEM208_SND2 PF05620.11 NODE_67461_length_235_cov_50.875000_g59520_i0forward_frame_1 - 0.053 13.3 0.6 0.066 13.0 0.6 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 PAP2_3 PF14378.6 NODE_67461_length_235_cov_50.875000_g59520_i0forward_frame_1 - 0.063 13.0 2.8 0.069 12.8 2.8 1.1 1 0 0 1 1 1 0 PAP2 superfamily Enterotoxin_b PF01376.18 NODE_67458_length_235_cov_55.750000_g59517_i0reverse_frame_1 - 0.042 14.0 0.0 0.044 14.0 0.0 1.2 1 0 0 1 1 1 0 Heat-labile enterotoxin beta chain Arif-1 PF06770.11 NODE_67457_length_235_cov_57.195000_g59516_i0reverse_frame_1 - 0.15 11.7 0.1 0.16 11.6 0.1 1.0 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) DUF2771 PF10969.8 NODE_67455_length_235_cov_62.260000_g59514_i0reverse_frame_1 - 0.57 10.2 1.8 0.63 10.1 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2771) Wza_C PF18412.1 NODE_67454_length_235_cov_62.570000_g59513_i0forward_frame_1 - 0.19 11.5 0.2 0.27 11.0 0.2 1.3 1 0 0 1 1 1 0 Outer-membrane lipoprotein Wza C-terminal domain HEV_ORF1 PF02444.16 NODE_67449_length_235_cov_67.940000_g59508_i0reverse_frame_1 - 1.7 9.2 8.3 1.9 9.1 8.3 1.2 1 1 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) TBP PF00352.21 NODE_67447_length_235_cov_73.595000_g59506_i0forward_frame_1 - 0.17 11.9 0.1 0.27 11.2 0.1 1.4 1 1 0 1 1 1 0 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3343 PF11823.8 NODE_67446_length_235_cov_73.975000_g59505_i0forward_frame_1 - 0.094 12.2 0.1 0.11 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) DUF755 PF05501.11 NODE_67444_length_235_cov_76.970000_g59503_i0reverse_frame_1 - 0.24 11.7 0.0 0.29 11.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Pex24p PF06398.11 NODE_67441_length_235_cov_82.480000_g59500_i0forward_frame_1 - 0.025 13.6 5.2 0.012 14.6 3.7 1.3 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF334 PF03904.13 NODE_67441_length_235_cov_82.480000_g59500_i0forward_frame_1 - 1.7 8.1 4.8 1.8 8.1 4.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF334) UCH PF00443.29 NODE_67430_length_235_cov_132.600000_g59489_i0reverse_frame_1 - 5.9e-12 45.6 0.5 7.6e-12 45.3 0.5 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Baculo_11_kDa PF06143.11 NODE_67427_length_235_cov_198.665000_g59486_i0forward_frame_1 - 0.072 12.7 1.8 0.12 11.9 0.1 2.0 1 1 1 2 2 2 0 Baculovirus 11 kDa family DUF5436 PF17504.2 NODE_67427_length_235_cov_198.665000_g59486_i0forward_frame_1 - 2.1 8.7 4.7 1.1 9.6 0.3 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5436) Holin_BhlA PF10960.8 NODE_67427_length_235_cov_198.665000_g59486_i0forward_frame_1 - 6.9 6.7 10.8 1 9.4 0.9 2.4 1 1 1 2 2 2 0 BhlA holin family M-factor PF03855.13 NODE_67418_length_235_cov_935.810000_g59477_i0forward_frame_1 - 0.045 13.9 0.1 0.075 13.2 0.1 1.3 1 0 0 1 1 1 0 M-factor zinc_ribbon_9 PF14369.6 NODE_67417_length_235_cov_1384.785000_g59476_i0reverse_frame_1 - 0.14 12.4 3.5 4.1 7.7 0.7 2.5 2 0 0 2 2 2 0 zinc-ribbon zf-C2H2_3 PF13878.6 NODE_67417_length_235_cov_1384.785000_g59476_i0reverse_frame_1 - 0.14 12.0 2.3 3.7 7.5 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO Zn-ribbon_8 PF09723.10 NODE_67417_length_235_cov_1384.785000_g59476_i0reverse_frame_1 - 2.1 8.5 10.7 4.5 7.5 0.0 3.0 2 1 1 3 3 3 0 Zinc ribbon domain TMEM247 PF15444.6 NODE_67409_length_236_cov_0.995025_g59468_i0reverse_frame_1 - 5 7.1 5.5 5.8 6.9 5.5 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 Death_2 PF14786.6 NODE_67407_length_236_cov_1.094527_g59466_i0forward_frame_1 - 0.053 13.5 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 Tube Death domain zf-NPL4 PF05020.15 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_1 - 0.041 14.0 8.7 0.046 13.9 8.7 1.1 1 0 0 1 1 1 0 NPL4 family, putative zinc binding region AID PF18767.1 NODE_67404_length_236_cov_1.144279_g59463_i0forward_frame_1 - 0.18 11.8 1.7 5.6 7.1 0.6 2.2 1 1 1 2 2 2 0 Activation induced deaminase DUF4337 PF14235.6 NODE_67402_length_236_cov_1.174129_g59461_i0reverse_frame_1 - 0.067 13.3 0.9 0.08 13.1 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Rep_1 PF01446.17 NODE_67401_length_236_cov_1.179104_g59460_i0reverse_frame_1 - 1.3 8.4 4.4 1.5 8.3 4.4 1.1 1 0 0 1 1 1 0 Replication protein Antimicrobial_6 PF08036.11 NODE_67401_length_236_cov_1.179104_g59460_i0forward_frame_1 - 0.035 14.2 3.0 0.11 12.6 0.4 2.2 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide AAA_lid_1 PF17857.1 NODE_67391_length_236_cov_1.223881_g59450_i0reverse_frame_1 - 5.1e-06 26.6 0.0 6.1e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 AAA+ lid domain MIF4G PF02854.19 NODE_67387_length_236_cov_1.268657_g59446_i0reverse_frame_1 - 5.8e-06 26.1 0.1 7e-06 25.8 0.1 1.0 1 0 0 1 1 1 1 MIF4G domain MutL PF13941.6 NODE_67387_length_236_cov_1.268657_g59446_i0reverse_frame_1 - 0.04 12.5 0.0 0.042 12.4 0.0 1.0 1 0 0 1 1 1 0 MutL protein ArAE_1_C PF11728.8 NODE_67387_length_236_cov_1.268657_g59446_i0forward_frame_1 - 0.11 12.5 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain PRY PF13765.6 NODE_67384_length_236_cov_1.308458_g59443_i0reverse_frame_1 - 0.053 13.2 0.1 0.11 12.2 0.1 1.4 1 0 0 1 1 1 0 SPRY-associated domain Flavi_propep PF01570.17 NODE_67383_length_236_cov_1.318408_g59442_i0forward_frame_1 - 0.035 14.1 0.2 0.035 14.1 0.2 1.6 2 0 0 2 2 2 0 Flavivirus polyprotein propeptide Dynactin_p22 PF07426.11 NODE_67379_length_236_cov_1.358209_g59438_i0forward_frame_1 - 0.012 15.5 1.2 0.015 15.1 1.2 1.1 1 0 0 1 1 1 0 Dynactin subunit p22 DUF5505 PF17610.2 NODE_67378_length_236_cov_1.368159_g59437_i0reverse_frame_1 - 0.0033 17.4 0.0 0.0035 17.4 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5505) Spc7 PF08317.11 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.001 18.0 5.9 0.001 18.0 5.9 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein KASH_CCD PF14662.6 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.011 15.6 6.4 0.011 15.5 6.4 1.1 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH HrpB7 PF09486.10 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.011 16.2 1.5 0.036 14.4 1.2 1.5 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) DUF4201 PF13870.6 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.011 15.5 8.1 0.012 15.4 8.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) Fez1 PF06818.15 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.011 16.1 4.0 0.012 16.1 4.0 1.1 1 0 0 1 1 1 0 Fez1 DUF3552 PF12072.8 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.023 14.1 6.5 0.025 14.0 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TPR_MLP1_2 PF07926.12 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.028 14.5 7.5 0.046 13.8 7.5 1.4 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein KxDL PF10241.9 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.037 14.3 4.5 0.037 14.3 3.0 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein DUF745 PF05335.13 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.051 13.3 4.4 0.059 13.1 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF745) HNOBA PF07701.14 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.071 12.5 2.2 0.074 12.5 2.2 1.3 1 0 0 1 1 1 0 Heme NO binding associated DUF1664 PF07889.12 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.092 12.8 4.1 0.12 12.4 4.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) CRF PF00473.17 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.093 12.8 0.1 0.18 11.9 0.1 1.5 1 0 0 1 1 1 0 Corticotropin-releasing factor family Exonuc_VII_L PF02601.15 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.13 11.8 3.4 0.12 11.9 3.4 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF948 PF06103.11 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.15 12.3 4.4 0.19 12.0 4.4 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) UPF0184 PF03670.13 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.16 12.4 3.8 0.29 11.5 3.1 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) DUF4407 PF14362.6 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.32 10.3 3.0 0.33 10.3 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) JIP_LZII PF16471.5 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 0.63 10.2 10.4 0.97 9.7 4.5 2.6 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II DivIC PF04977.15 NODE_67375_length_236_cov_1.388060_g59434_i0reverse_frame_1 - 5.9 6.7 6.9 29 4.5 6.9 1.9 1 1 0 1 1 1 0 Septum formation initiator Npa1 PF11707.8 NODE_67370_length_236_cov_1.467662_g59429_i0reverse_frame_1 - 0.025 14.0 0.0 0.028 13.8 0.0 1.1 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal GED PF02212.18 NODE_67364_length_236_cov_1.522388_g59423_i0forward_frame_1 - 0.14 12.3 1.8 0.18 11.9 1.8 1.2 1 0 0 1 1 1 0 Dynamin GTPase effector domain BRI3BP PF14965.6 NODE_67363_length_236_cov_1.527363_g59422_i0forward_frame_1 - 0.0032 17.0 0.4 0.004 16.7 0.4 1.1 1 0 0 1 1 1 1 Negative regulator of p53/TP53 Toxin_TOLIP PF00087.21 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_1 - 0.076 13.3 0.5 0.091 13.0 0.5 1.2 1 0 0 1 1 1 0 Snake toxin and toxin-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks338.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks338.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks338.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks338.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PP2C PF00481.21 NODE_67356_length_236_cov_1.582090_g59415_i0forward_frame_1 - 2.1e-08 34.2 0.1 2.2e-08 34.0 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DEAD PF00270.29 NODE_67355_length_236_cov_1.587065_g59414_i0forward_frame_1 - 1.8e-08 34.3 0.1 2.3e-08 34.0 0.1 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase SspP PF08179.12 NODE_67353_length_236_cov_1.592040_g59412_i0reverse_frame_1 - 0.016 15.6 3.9 0.31 11.5 0.3 2.2 2 0 0 2 2 2 0 Small acid-soluble spore protein P family DUF3875 PF12991.7 NODE_67352_length_236_cov_1.592040_g59411_i0reverse_frame_1 - 0.09 12.7 0.2 0.18 11.8 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3875) ARF7EP_C PF14949.6 NODE_67348_length_236_cov_1.606965_g59407_i0reverse_frame_1 - 0.027 15.1 0.4 0.033 14.8 0.4 1.2 1 0 0 1 1 1 0 ARF7 effector protein C-terminus EamA PF00892.20 NODE_67347_length_236_cov_1.616915_g59406_i0forward_frame_1 - 0.0067 16.6 2.7 0.008 16.4 2.7 1.1 1 0 0 1 1 1 1 EamA-like transporter family Copine PF07002.16 NODE_67341_length_236_cov_1.691542_g59400_i0forward_frame_1 - 6.6e-17 61.7 0.0 6.9e-17 61.6 0.0 1.0 1 0 0 1 1 1 1 Copine DUF4636 PF15468.6 NODE_67339_length_236_cov_1.711443_g59398_i0forward_frame_1 - 0.031 14.0 1.2 0.034 13.9 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) Rhodanese_C PF12368.8 NODE_67339_length_236_cov_1.711443_g59398_i0forward_frame_1 - 0.16 12.4 4.7 0.13 12.7 3.2 1.7 1 1 1 2 2 2 0 Rhodanase C-terminal DNA_meth_N PF18284.1 NODE_67335_length_236_cov_1.761194_g59394_i0forward_frame_1 - 0.047 13.6 0.0 0.078 12.9 0.0 1.4 1 1 0 1 1 1 0 DNA methylase N-terminal domain Pkinase PF00069.25 NODE_67333_length_236_cov_1.766169_g59392_i0forward_frame_1 - 2.1e-16 60.1 0.0 2.4e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67333_length_236_cov_1.766169_g59392_i0forward_frame_1 - 5.9e-08 32.3 0.0 1.3e-07 31.2 0.0 1.5 1 1 0 1 1 1 1 Protein tyrosine kinase MID_pPIWI_RE PF18157.1 NODE_67331_length_236_cov_1.781095_g59390_i0forward_frame_1 - 0.039 14.3 0.3 0.041 14.2 0.3 1.1 1 0 0 1 1 1 0 MID domain of pPIWI_RE WRKY PF03106.15 NODE_67330_length_236_cov_1.786070_g59389_i0reverse_frame_1 - 0.035 14.3 1.1 0.044 14.0 1.1 1.2 1 0 0 1 1 1 0 WRKY DNA -binding domain VP9 PF09625.10 NODE_67327_length_236_cov_1.845771_g59386_i0forward_frame_1 - 0.098 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 VP9 protein IGFL PF14653.6 NODE_67318_length_236_cov_1.985075_g59377_i0reverse_frame_1 - 0.022 14.7 0.1 0.026 14.5 0.1 1.1 1 0 0 1 1 1 0 Insulin growth factor-like family INSC_LBD PF16748.5 NODE_67311_length_236_cov_2.039801_g59370_i0reverse_frame_1 - 0.41 10.1 6.8 0.4 10.2 1.8 2.2 1 1 1 2 2 2 0 Inscuteable LGN-binding domain Corona_nucleoca PF00937.18 NODE_67304_length_236_cov_2.278607_g59363_i0forward_frame_1 - 9.8 5.1 7.9 10 5.0 7.9 1.0 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Tad PF13400.6 NODE_67302_length_236_cov_2.363184_g59361_i0forward_frame_1 - 5.6 7.4 0.0 5.6 7.4 0.0 3.1 3 0 0 3 3 3 0 Putative Flp pilus-assembly TadE/G-like Wzy_C PF04932.15 NODE_67302_length_236_cov_2.363184_g59361_i0forward_frame_1 - 5.7 6.6 9.3 3.3 7.3 6.3 1.8 2 0 0 2 2 2 0 O-Antigen ligase Imm58 PF15581.6 NODE_67300_length_236_cov_2.368159_g59359_i0reverse_frame_1 - 0.085 13.0 0.0 0.099 12.7 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 58 WT1 PF02165.15 NODE_67299_length_236_cov_2.402985_g59358_i0reverse_frame_1 - 0.011 15.1 0.4 0.011 15.0 0.4 1.2 1 0 0 1 1 1 0 Wilm's tumour protein Ndc1_Nup PF09531.10 NODE_67295_length_236_cov_2.482587_g59354_i0forward_frame_1 - 2.4 6.8 7.4 2.7 6.6 7.4 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Exo_endo_phos_2 PF14529.6 NODE_67292_length_236_cov_2.532338_g59351_i0reverse_frame_1 - 0.052 13.4 0.0 0.062 13.2 0.0 1.1 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Orbi_VP7 PF00897.17 NODE_67292_length_236_cov_2.532338_g59351_i0reverse_frame_1 - 0.06 12.3 0.0 0.065 12.2 0.0 1.0 1 0 0 1 1 1 0 Orbivirus inner capsid protein VP7 Nrf1_DNA-bind PF10491.9 NODE_67292_length_236_cov_2.532338_g59351_i0reverse_frame_1 - 0.073 12.8 0.0 0.086 12.5 0.0 1.2 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 Prok-RING_2 PF14445.6 NODE_67292_length_236_cov_2.532338_g59351_i0forward_frame_1 - 0.053 13.7 2.3 7 6.9 0.2 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 2 CTV_P23 PF04808.12 NODE_67291_length_236_cov_2.532338_g59350_i0reverse_frame_1 - 0.065 12.8 0.0 0.068 12.7 0.0 1.1 1 0 0 1 1 1 0 Citrus tristeza virus (CTV) P23 protein Aldedh PF00171.22 NODE_67287_length_236_cov_2.572139_g59346_i0reverse_frame_1 - 0.045 12.3 0.1 0.048 12.2 0.1 1.0 1 0 0 1 1 1 0 Aldehyde dehydrogenase family zf_C2H2_10 PF18414.1 NODE_67286_length_236_cov_2.621891_g59345_i0forward_frame_1 - 0.11 12.1 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger SPATA9 PF15824.5 NODE_67281_length_236_cov_2.786070_g59340_i0reverse_frame_1 - 0.023 14.0 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 9 Cytochrome_CBB3 PF13442.6 NODE_67280_length_236_cov_2.855721_g59339_i0reverse_frame_1 - 0.024 15.0 0.0 0.027 14.8 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III UNC119_bdg PF15435.6 NODE_67280_length_236_cov_2.855721_g59339_i0forward_frame_1 - 0.00071 19.2 1.1 0.00077 19.1 1.0 1.3 1 1 0 1 1 1 1 UNC119-binding protein C5orf30 homologue DUF2374 PF09574.10 NODE_67279_length_236_cov_2.890547_g59338_i0reverse_frame_1 - 0.29 11.0 0.2 0.29 11.0 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (Duf2374) DUF72 PF01904.18 NODE_67279_length_236_cov_2.890547_g59338_i0forward_frame_1 - 1e-07 32.3 0.0 1.2e-07 32.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 Fanconi_C PF02106.15 NODE_67279_length_236_cov_2.890547_g59338_i0forward_frame_1 - 0.063 12.0 0.3 0.08 11.6 0.3 1.1 1 0 0 1 1 1 0 Fanconi anaemia group C protein Secretin_N PF03958.17 NODE_67278_length_236_cov_2.925373_g59337_i0forward_frame_1 - 0.094 13.1 0.1 0.12 12.8 0.1 1.1 1 0 0 1 1 1 0 Bacterial type II/III secretion system short domain Lamprin PF06403.11 NODE_67274_length_236_cov_3.318408_g59333_i0reverse_frame_1 - 0.0035 17.3 0.1 0.0042 17.1 0.1 1.1 1 0 0 1 1 1 1 Lamprin Pkinase_Tyr PF07714.17 NODE_67269_length_236_cov_3.482587_g59328_i0forward_frame_1 - 0.00065 19.1 0.0 0.00075 18.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_67269_length_236_cov_3.482587_g59328_i0forward_frame_1 - 0.027 13.8 0.0 0.029 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Wzy_C_2 PF11846.8 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 0.95 9.4 5.9 0.53 10.2 4.1 1.5 1 1 1 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal Papilloma_E5A PF05776.12 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 1.7 9.0 22.2 2 8.8 22.2 1.1 1 0 0 1 1 1 0 Papillomavirus E5A protein Shisa PF13908.6 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 3.5 7.8 12.1 4.2 7.6 12.1 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Amnionless PF14828.6 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 4.4 6.0 9.8 5.4 5.7 9.8 1.2 1 0 0 1 1 1 0 Amnionless m04gp34like PF12216.8 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_1 - 7.5 6.0 16.0 19 4.7 16.0 1.6 1 1 0 1 1 1 0 Immune evasion protein RIFIN PF02009.16 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 0.037 13.9 0.3 0.038 13.9 0.3 1.0 1 0 0 1 1 1 0 Rifin PMT_2 PF13231.6 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 0.41 10.9 8.1 0.47 10.7 8.1 1.0 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase AJAP1_PANP_C PF15298.6 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 0.53 10.5 16.3 0.59 10.3 16.3 1.3 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF5305 PF17231.2 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 0.73 9.2 7.4 0.8 9.1 7.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) BSP_II PF05432.11 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_1 - 3.6 7.2 12.7 4.1 7.0 12.7 1.0 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) Tra_M PF05261.11 NODE_67244_length_236_cov_48.656716_g59303_i0forward_frame_1 - 0.05 13.6 0.0 0.059 13.3 0.0 1.1 1 0 0 1 1 1 0 TraM protein, DNA-binding zf-RING_2 PF13639.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 7.5e-10 39.0 5.0 1.2e-09 38.4 5.0 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 1.5e-06 28.4 7.5 8e-06 26.1 7.5 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 9.3e-06 25.6 2.3 9.3e-06 25.6 2.3 1.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 1.6e-05 24.6 4.2 3.6e-05 23.5 4.2 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.00017 21.7 7.0 0.0077 16.4 7.0 2.5 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.00029 20.7 2.7 0.00064 19.5 2.7 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.0011 19.0 2.1 0.0011 19.0 2.1 1.5 1 1 0 1 1 1 1 RING-variant domain zf-RING_5 PF14634.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.0013 18.6 4.1 0.0026 17.7 4.1 1.5 1 1 0 1 1 1 1 zinc-RING finger domain zf-Di19 PF05605.12 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.0021 18.3 1.4 1.3 9.4 0.1 2.3 2 0 0 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-RING_11 PF17123.5 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.0022 17.7 0.9 0.0022 17.7 0.9 1.9 2 1 0 2 2 2 1 RING-like zinc finger Prok-RING_4 PF14447.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.0033 17.2 5.2 0.031 14.1 0.9 2.3 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 DNA_ligase_ZBD PF03119.16 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.0079 16.2 0.4 0.92 9.6 0.1 2.2 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain Rad50_zn_hook PF04423.14 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.016 15.1 0.7 2.4 8.1 0.0 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-C3HC4_5 PF17121.5 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.018 14.9 4.7 0.16 11.8 1.7 2.3 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.023 14.5 4.9 0.059 13.2 4.9 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.025 14.5 4.7 0.2 11.6 0.6 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-UDP PF14569.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.036 14.2 3.0 0.055 13.6 3.0 1.3 1 1 0 1 1 1 0 Zinc-binding RING-finger Zn_ribbon_17 PF17120.5 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.062 12.9 3.2 0.11 12.1 3.2 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.075 13.1 4.6 1.3 9.1 4.6 2.7 1 1 0 1 1 1 0 RING-type zinc-finger zinc-ribbons_6 PF07191.12 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.13 12.3 4.9 0.22 11.5 4.0 1.8 1 1 0 1 1 1 0 zinc-ribbons UBZ_FAAP20 PF15750.5 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.13 12.2 1.1 3.8 7.5 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-binding zinc-finger zf-RING_4 PF14570.6 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.16 11.8 5.2 0.25 11.1 5.2 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn-C2H2_12 PF18112.1 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.26 11.8 6.9 5.2 7.6 0.8 2.5 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain DZR PF12773.7 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.3 11.1 5.8 6.3 6.9 5.8 2.2 1 1 0 1 1 1 0 Double zinc ribbon RecR PF02132.15 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.38 10.3 0.2 0.38 10.3 0.2 2.7 3 0 0 3 3 2 0 RecR protein DpnI PF06044.12 NODE_67242_length_236_cov_53.318408_g59301_i0reverse_frame_1 - 0.38 10.4 5.1 0.084 12.5 1.9 1.5 1 1 1 2 2 2 0 Dam-replacing family DUF1610 PF07754.11 NODE_67240_length_236_cov_55.417910_g59299_i0reverse_frame_1 - 0.029 14.3 1.0 0.079 12.9 1.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1610) Neuroparsin PF07327.11 NODE_67240_length_236_cov_55.417910_g59299_i0forward_frame_1 - 0.012 16.0 1.3 0.013 16.0 1.3 1.1 1 0 0 1 1 1 0 Neuroparsin DZR PF12773.7 NODE_67240_length_236_cov_55.417910_g59299_i0forward_frame_1 - 0.12 12.4 7.2 0.17 12.0 7.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon Dynein_AAA_lid PF17852.1 NODE_67239_length_236_cov_56.393035_g59298_i0reverse_frame_1 - 8e-15 55.1 0.1 9.1e-15 54.9 0.1 1.0 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain IL32 PF15225.6 NODE_67235_length_236_cov_59.154229_g59294_i0reverse_frame_1 - 0.05 14.0 0.2 0.055 13.8 0.2 1.2 1 0 0 1 1 1 0 Interleukin 32 Ndufs5 PF10200.9 NODE_67229_length_236_cov_67.855721_g59288_i0reverse_frame_1 - 0.031 14.5 0.0 0.037 14.3 0.0 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa DUF2628 PF10947.8 NODE_67225_length_236_cov_84.398010_g59284_i0forward_frame_1 - 0.0085 16.4 0.5 0.01 16.2 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2628) Na_sulph_symp PF00939.19 NODE_67225_length_236_cov_84.398010_g59284_i0forward_frame_1 - 0.02 13.9 5.5 0.021 13.9 5.5 1.0 1 0 0 1 1 1 0 Sodium:sulfate symporter transmembrane region V-set_2 PF15910.5 NODE_67222_length_236_cov_91.502488_g59281_i0forward_frame_1 - 0.035 14.2 0.6 0.039 14.0 0.6 1.2 1 0 0 1 1 1 0 ICOS V-set domain RMI1_C PF16099.5 NODE_67222_length_236_cov_91.502488_g59281_i0forward_frame_1 - 0.092 12.6 0.1 0.098 12.5 0.1 1.1 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold NB-ARC PF00931.22 NODE_67217_length_236_cov_129.781095_g59276_i0reverse_frame_1 - 0.31 10.2 1.4 24 4.0 0.1 3.0 1 1 2 3 3 3 0 NB-ARC domain DUF2148 PF09918.9 NODE_67217_length_236_cov_129.781095_g59276_i0forward_frame_1 - 0.0036 17.3 0.0 8.7 6.5 0.0 3.1 2 1 1 3 3 3 3 Uncharacterized protein containing a ferredoxin domain (DUF2148) DUF2863 PF11062.8 NODE_67216_length_236_cov_131.885572_g59275_i0forward_frame_1 - 0.078 11.4 0.1 0.096 11.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2863) DUF1068 PF06364.12 NODE_67212_length_236_cov_191.164179_g59271_i0forward_frame_1 - 0.024 14.5 1.0 0.024 14.5 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) DUF1652 PF07865.11 NODE_67212_length_236_cov_191.164179_g59271_i0forward_frame_1 - 0.11 12.3 0.7 0.15 11.9 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) EVC2_like PF12297.8 NODE_67208_length_236_cov_318.895522_g59267_i0forward_frame_1 - 1.3 7.6 4.3 1.3 7.6 4.3 1.1 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein AhpC-TSA PF00578.21 NODE_67207_length_236_cov_328.184080_g59266_i0forward_frame_1 - 0.054 13.4 0.1 0.055 13.4 0.1 1.2 1 0 0 1 1 1 0 AhpC/TSA family Kinase-like PF14531.6 NODE_67207_length_236_cov_328.184080_g59266_i0forward_frame_1 - 0.18 11.1 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Med8 PF10232.9 NODE_67205_length_236_cov_349.398010_g59264_i0forward_frame_1 - 0.058 13.0 2.1 0.07 12.7 2.1 1.1 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 GspL_C PF12693.7 NODE_67205_length_236_cov_349.398010_g59264_i0forward_frame_1 - 0.35 10.7 5.1 0.39 10.5 5.1 1.1 1 0 0 1 1 1 0 GspL periplasmic domain DUF5570 PF17731.1 NODE_67203_length_236_cov_514.592040_g59262_i0forward_frame_1 - 0.0086 16.2 0.6 0.01 16.0 0.6 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5570) NdhL PF10716.9 NODE_67201_length_237_cov_0.787129_g59260_i0reverse_frame_1 - 0.051 13.5 0.8 0.07 13.1 0.8 1.2 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit UPF0542 PF15086.6 NODE_67199_length_237_cov_0.792079_g59258_i0forward_frame_1 - 0.16 11.9 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 RPN5_C PF18098.1 NODE_67197_length_237_cov_0.797030_g59256_i0forward_frame_1 - 0.15 12.2 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN5 C-terminal domain TSC22 PF01166.18 NODE_67191_length_237_cov_0.990099_g59250_i0reverse_frame_1 - 0.065 13.5 0.2 0.29 11.5 0.1 1.9 1 1 1 2 2 2 0 TSC-22/dip/bun family LepB_GAP_N PF18172.1 NODE_67190_length_237_cov_0.990099_g59249_i0reverse_frame_1 - 0.016 15.1 0.0 0.017 15.0 0.0 1.0 1 0 0 1 1 1 0 LepB GAP domain N-terminal subdomain RE_ApaLI PF09499.10 NODE_67190_length_237_cov_0.990099_g59249_i0forward_frame_1 - 0.047 13.4 0.6 0.071 12.8 0.6 1.3 1 1 0 1 1 1 0 ApaLI-like restriction endonuclease DUF1580 PF07618.11 NODE_67187_length_237_cov_1.049505_g59246_i0forward_frame_1 - 0.1 12.3 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) Promethin PF16015.5 NODE_67182_length_237_cov_1.108911_g59241_i0reverse_frame_1 - 4.8 7.1 15.0 5.7 6.9 15.0 1.1 1 0 0 1 1 1 0 Promethin DUF5568 PF17724.1 NODE_67182_length_237_cov_1.108911_g59241_i0forward_frame_1 - 0.072 12.9 9.2 0.083 12.7 9.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5568) UL16 PF17622.2 NODE_67177_length_237_cov_1.183168_g59236_i0reverse_frame_1 - 0.042 13.5 0.0 0.051 13.2 0.0 1.0 1 0 0 1 1 1 0 Viral unique long protein 16 B12D PF06522.11 NODE_67175_length_237_cov_1.183168_g59234_i0reverse_frame_1 - 0.025 14.4 2.0 0.036 13.8 2.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit SLBP_RNA_bind PF15247.6 NODE_67164_length_237_cov_1.227723_g59223_i0reverse_frame_1 - 0.058 13.5 0.6 0.17 12.0 0.1 1.8 2 0 0 2 2 2 0 Histone RNA hairpin-binding protein RNA-binding domain Dmrt1 PF12374.8 NODE_67164_length_237_cov_1.227723_g59223_i0reverse_frame_1 - 0.34 11.4 5.4 0.43 11.1 5.4 1.2 1 0 0 1 1 1 0 Double-sex mab3 related transcription factor 1 Pox_F17 PF04767.12 NODE_67161_length_237_cov_1.306931_g59220_i0reverse_frame_1 - 2.2 8.9 6.6 11 6.5 2.7 2.0 1 1 1 2 2 2 0 DNA-binding 11 kDa phosphoprotein DUF3370 PF11850.8 NODE_67160_length_237_cov_1.306931_g59219_i0reverse_frame_1 - 0.22 10.3 0.1 0.25 10.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3370) Lamprin PF06403.11 NODE_67159_length_237_cov_1.311881_g59218_i0forward_frame_1 - 0.16 11.9 1.1 0.2 11.6 1.1 1.1 1 0 0 1 1 1 0 Lamprin MCM PF00493.23 NODE_67154_length_237_cov_1.386139_g59213_i0reverse_frame_1 - 3e-39 134.5 0.2 3.2e-39 134.4 0.2 1.0 1 0 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 NODE_67154_length_237_cov_1.386139_g59213_i0reverse_frame_1 - 1.6e-05 24.4 0.0 1.7e-05 24.3 0.0 1.0 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 NODE_67154_length_237_cov_1.386139_g59213_i0reverse_frame_1 - 0.0074 16.1 0.0 0.0083 16.0 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 NODE_67154_length_237_cov_1.386139_g59213_i0reverse_frame_1 - 0.0076 16.3 0.0 0.0092 16.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) PEARLI-4 PF05278.12 NODE_67149_length_237_cov_1.425743_g59208_i0reverse_frame_1 - 0.019 14.5 0.1 0.019 14.5 0.1 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) Histone_H2A_C PF16211.5 NODE_67143_length_237_cov_1.470297_g59202_i0reverse_frame_1 - 0.056 13.2 0.3 0.092 12.5 0.1 1.5 2 0 0 2 2 2 0 C-terminus of histone H2A Ribosomal_S17_N PF16205.5 NODE_67140_length_237_cov_1.534653_g59199_i0forward_frame_1 - 0.12 12.7 0.4 1.2 9.6 0.0 2.0 1 1 1 2 2 2 0 Ribosomal_S17 N-terminal CDKN3 PF05706.12 NODE_67138_length_237_cov_1.544554_g59197_i0reverse_frame_1 - 0.38 10.4 4.3 0.73 9.5 2.6 1.8 1 1 1 2 2 2 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Pkinase PF00069.25 NODE_67134_length_237_cov_1.569307_g59193_i0reverse_frame_1 - 7.6e-06 25.5 0.0 7.8e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain FtsK_4TM PF13491.6 NODE_67133_length_237_cov_1.569307_g59192_i0forward_frame_1 - 5.8e-08 32.6 0.4 6.8e-08 32.4 0.4 1.1 1 0 0 1 1 1 1 4TM region of DNA translocase FtsK/SpoIIIE HTH_11 PF08279.12 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_1 - 0.062 13.3 0.5 0.13 12.3 0.0 1.8 2 0 0 2 2 2 0 HTH domain Trp_Tyr_perm PF03222.13 NODE_67124_length_237_cov_1.712871_g59183_i0forward_frame_1 - 2e-10 40.3 1.5 2.1e-10 40.2 1.5 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Pet191_N PF10203.9 NODE_67119_length_237_cov_1.772277_g59178_i0forward_frame_1 - 0.0066 16.7 3.2 0.009 16.3 3.2 1.2 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein PET191 EGF PF00008.27 NODE_67119_length_237_cov_1.772277_g59178_i0forward_frame_1 - 0.32 11.3 3.0 0.48 10.8 3.0 1.3 1 0 0 1 1 1 0 EGF-like domain WG_beta_rep PF14903.6 NODE_67115_length_237_cov_1.797030_g59174_i0reverse_frame_1 - 0.14 12.5 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 WG containing repeat Fijivirus_P9-2 PF06837.11 NODE_67114_length_237_cov_1.797030_g59173_i0forward_frame_1 - 0.16 11.4 0.9 0.18 11.3 0.9 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein Beta_helix PF13229.6 NODE_67107_length_237_cov_1.915842_g59166_i0forward_frame_1 - 0.00014 21.8 0.1 0.00015 21.7 0.1 1.1 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_67107_length_237_cov_1.915842_g59166_i0forward_frame_1 - 0.0019 17.5 0.0 0.0019 17.5 0.0 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Lamprin PF06403.11 NODE_67106_length_237_cov_1.940594_g59165_i0reverse_frame_1 - 0.11 12.4 5.9 0.32 11.0 5.9 1.8 1 1 0 1 1 1 0 Lamprin FAP PF07174.11 NODE_67106_length_237_cov_1.940594_g59165_i0forward_frame_1 - 0.86 9.0 10.0 0.82 9.1 10.0 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Phage_int_SAM_1 PF02899.17 NODE_67103_length_237_cov_1.965347_g59162_i0reverse_frame_1 - 0.023 15.0 0.0 0.028 14.7 0.0 1.1 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Pkinase PF00069.25 NODE_67101_length_237_cov_2.014851_g59160_i0reverse_frame_1 - 8.6e-15 54.8 0.5 9.7e-15 54.6 0.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67101_length_237_cov_2.014851_g59160_i0reverse_frame_1 - 2.3e-06 27.1 0.1 2.4e-06 27.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PsbH PF00737.20 NODE_67100_length_237_cov_2.054455_g59159_i0forward_frame_1 - 0.38 10.5 3.8 0.62 9.8 3.8 1.3 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein NdhL PF10716.9 NODE_67099_length_237_cov_2.059406_g59158_i0forward_frame_1 - 0.096 12.7 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit DUF2225 PF09986.9 NODE_67092_length_237_cov_2.123762_g59151_i0forward_frame_1 - 0.023 14.5 0.1 0.023 14.4 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) SNAD2 PF18745.1 NODE_67092_length_237_cov_2.123762_g59151_i0forward_frame_1 - 0.033 13.9 0.1 0.037 13.7 0.1 1.1 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 2 NR_Repeat PF14046.6 NODE_67089_length_237_cov_2.257426_g59148_i0reverse_frame_1 - 0.055 13.6 0.5 0.083 13.0 0.5 1.3 1 0 0 1 1 1 0 Nuclear receptor repeat DUF4714 PF15833.5 NODE_67088_length_237_cov_2.371287_g59147_i0forward_frame_1 - 0.03 14.3 0.1 0.035 14.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) TRP PF06011.12 NODE_67081_length_237_cov_2.747525_g59140_i0reverse_frame_1 - 0.022 13.5 8.4 0.025 13.3 8.4 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Pescadillo_N PF06732.11 NODE_67072_length_237_cov_3.163366_g59131_i0reverse_frame_1 - 0.12 11.9 0.1 0.13 11.7 0.1 1.0 1 0 0 1 1 1 0 Pescadillo N-terminus Apis_Csd PF11671.8 NODE_67057_length_237_cov_39.861386_g59116_i0forward_frame_1 - 0.57 10.2 7.3 0.74 9.8 7.3 1.2 1 0 0 1 1 1 0 Complementary sex determiner protein Mem_trans PF03547.18 NODE_67057_length_237_cov_39.861386_g59116_i0forward_frame_1 - 1.1 7.6 4.3 1.2 7.4 4.3 1.0 1 0 0 1 1 1 0 Membrane transport protein Selenoprotein_S PF06936.11 NODE_67054_length_237_cov_43.034653_g59113_i0forward_frame_1 - 3.9 7.2 5.2 4.5 7.0 5.2 1.2 1 0 0 1 1 1 0 Selenoprotein S (SelS) MVL PF12151.8 NODE_67051_length_237_cov_45.282178_g59110_i0forward_frame_1 - 0.021 14.7 0.1 0.43 10.5 0.0 2.1 2 0 0 2 2 2 0 Mannan-binding protein Adeno_E4 PF05385.11 NODE_67046_length_237_cov_50.277228_g59105_i0reverse_frame_1 - 0.96 9.6 5.4 0.49 10.5 4.0 1.3 1 1 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein Microvir_lysis PF04517.12 NODE_67026_length_237_cov_88.757426_g59085_i0forward_frame_1 - 0.015 15.2 0.1 0.029 14.3 0.1 1.4 1 0 0 1 1 1 0 Microvirus lysis protein (E), C terminus DUF2218 PF09981.9 NODE_67026_length_237_cov_88.757426_g59085_i0forward_frame_1 - 0.057 13.8 0.1 0.068 13.6 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2218) DUF2972 PF11186.8 NODE_67022_length_237_cov_104.594059_g59081_i0reverse_frame_1 - 0.0064 16.4 1.1 0.0065 16.4 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2972) Not1 PF04054.15 NODE_67022_length_237_cov_104.594059_g59081_i0reverse_frame_1 - 0.056 12.4 1.1 0.058 12.3 1.1 1.0 1 0 0 1 1 1 0 CCR4-Not complex component, Not1 Phi-29_GP4 PF05464.11 NODE_67022_length_237_cov_104.594059_g59081_i0reverse_frame_1 - 0.085 13.1 0.1 0.097 12.9 0.1 1.1 1 0 0 1 1 1 0 Phi-29-like late genes activator (early protein GP4) BT1 PF03092.16 NODE_67022_length_237_cov_104.594059_g59081_i0reverse_frame_1 - 0.088 11.0 0.5 0.091 11.0 0.5 1.0 1 0 0 1 1 1 0 BT1 family Antiterm PF03589.13 NODE_67021_length_237_cov_110.381188_g59080_i0forward_frame_1 - 0.055 13.8 0.0 0.077 13.3 0.0 1.2 1 0 0 1 1 1 0 Antitermination protein DUF678 PF05077.12 NODE_67011_length_237_cov_249.247525_g59070_i0reverse_frame_1 - 0.19 11.9 0.6 0.19 11.9 0.6 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF678) Tnp_zf-ribbon_2 PF13842.6 NODE_67011_length_237_cov_249.247525_g59070_i0reverse_frame_1 - 0.4 11.5 0.7 0.4 11.5 0.7 2.1 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-RING_5 PF14634.6 NODE_67005_length_237_cov_474.306931_g59064_i0forward_frame_1 - 0.014 15.3 1.9 0.029 14.3 1.9 1.5 1 0 0 1 1 1 0 zinc-RING finger domain Tnp_zf-ribbon_2 PF13842.6 NODE_67000_length_238_cov_0.788177_g59059_i0reverse_frame_2 - 0.22 12.3 0.7 0.22 12.3 0.7 2.6 2 1 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-C6H2 PF15801.5 NODE_66998_length_238_cov_0.871921_g59057_i0reverse_frame_2 - 0.12 12.7 4.6 0.27 11.6 0.6 2.6 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding PAC4 PF16093.5 NODE_66997_length_238_cov_0.886700_g59056_i0reverse_frame_3 - 0.49 10.6 10.0 2.4e+02 2.0 9.9 2.9 1 1 0 1 1 1 0 Proteasome assembly chaperone 4 PRP38_assoc PF12871.7 NODE_66997_length_238_cov_0.886700_g59056_i0reverse_frame_2 - 0.026 15.1 18.8 0.026 15.1 18.8 1.8 1 1 1 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Auts2 PF15336.6 NODE_66997_length_238_cov_0.886700_g59056_i0reverse_frame_2 - 2.1 8.4 10.4 2.5 8.1 10.4 1.2 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Apq12 PF12716.7 NODE_66994_length_238_cov_0.980296_g59053_i0reverse_frame_2 - 0.14 12.2 0.1 0.14 12.2 0.1 1.4 2 0 0 2 2 2 0 Nuclear pore assembly and biogenesis zf-SAP30 PF13866.6 NODE_66990_length_238_cov_1.172414_g59049_i0reverse_frame_3 - 0.5 10.5 2.4 10 6.3 0.3 2.4 1 1 1 2 2 2 0 SAP30 zinc-finger HRXXH PF13933.6 NODE_66986_length_238_cov_1.177340_g59045_i0forward_frame_2 - 0.048 13.2 0.1 0.049 13.2 0.1 1.2 1 0 0 1 1 1 0 Putative peptidase family zf-TRAF PF02176.18 NODE_66985_length_238_cov_1.177340_g59044_i0reverse_frame_3 - 0.049 14.3 0.1 0.049 14.3 0.1 2.0 3 0 0 3 3 3 0 TRAF-type zinc finger DUF4305 PF14146.6 NODE_66979_length_238_cov_1.187192_g59038_i0forward_frame_2 - 0.023 14.9 1.0 2.7 8.3 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4305) IMPa_helical PF18642.1 NODE_66977_length_238_cov_1.270936_g59036_i0forward_frame_3 - 0.021 15.2 0.1 0.025 15.0 0.1 1.3 1 1 0 1 1 1 0 Immunomodulating metalloprotease helical domain DUF247 PF03140.15 NODE_66977_length_238_cov_1.270936_g59036_i0forward_frame_3 - 0.023 13.9 0.0 0.024 13.8 0.0 1.0 1 0 0 1 1 1 0 Plant protein of unknown function TERB2 PF15101.6 NODE_66977_length_238_cov_1.270936_g59036_i0forward_frame_3 - 0.07 13.2 1.3 0.087 12.9 1.1 1.3 1 1 0 1 1 1 0 Telomere-associated protein TERB2 DUF1589 PF07628.11 NODE_66977_length_238_cov_1.270936_g59036_i0forward_frame_2 - 0.0081 16.3 0.1 0.0085 16.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1589) Wzy_C PF04932.15 NODE_66975_length_238_cov_1.295567_g59034_i0forward_frame_3 - 0.053 13.2 0.4 0.06 13.0 0.4 1.0 1 0 0 1 1 1 0 O-Antigen ligase DUF5338 PF17273.2 NODE_66974_length_238_cov_1.305419_g59033_i0reverse_frame_3 - 0.056 13.5 0.4 0.056 13.5 0.4 2.3 1 1 0 2 2 2 0 Family of unknown function (DUF5338) EF-hand_14 PF17959.1 NODE_66974_length_238_cov_1.305419_g59033_i0reverse_frame_3 - 0.81 10.1 3.3 1.5 9.2 3.3 1.6 1 1 0 1 1 1 0 EF-hand domain Oxidored-like PF09791.9 NODE_66971_length_238_cov_1.325123_g59030_i0reverse_frame_3 - 0.032 13.9 0.9 0.055 13.2 0.9 1.4 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal BPD_transp_2 PF02653.16 NODE_66971_length_238_cov_1.325123_g59030_i0reverse_frame_2 - 0.00098 18.4 4.1 0.0012 18.1 4.1 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component OFeT_1 PF16955.5 NODE_66971_length_238_cov_1.325123_g59030_i0forward_frame_3 - 0.1 12.3 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter Orbi_VP5 PF00901.17 NODE_66968_length_238_cov_1.374384_g59027_i0reverse_frame_3 - 0.0035 15.8 0.1 0.0035 15.8 0.1 1.1 1 0 0 1 1 1 1 Orbivirus outer capsid protein VP5 Curto_V2 PF07325.11 NODE_66968_length_238_cov_1.374384_g59027_i0reverse_frame_3 - 0.0079 16.1 0.4 0.0086 15.9 0.4 1.1 1 0 0 1 1 1 1 Curtovirus V2 protein FliD_C PF07195.12 NODE_66968_length_238_cov_1.374384_g59027_i0reverse_frame_3 - 0.021 14.3 0.0 0.024 14.0 0.0 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus MRPL52 PF18699.1 NODE_66968_length_238_cov_1.374384_g59027_i0reverse_frame_3 - 0.038 14.2 2.2 0.049 13.8 2.2 1.2 1 0 0 1 1 1 0 Mitoribosomal protein mL52 ACI44 PF15270.6 NODE_66968_length_238_cov_1.374384_g59027_i0reverse_frame_2 - 0.0066 16.6 0.2 0.014 15.6 0.2 1.5 1 0 0 1 1 1 1 Metallo-carboxypeptidase inhibitor DUF640 PF04852.12 NODE_66964_length_238_cov_1.418719_g59023_i0forward_frame_2 - 1.7 8.8 5.2 2.5 8.3 5.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF640) TssN PF17555.2 NODE_66960_length_238_cov_1.467980_g59019_i0reverse_frame_3 - 0.2 11.0 0.2 0.23 10.8 0.2 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN OCD_Mu_crystall PF02423.15 NODE_66958_length_238_cov_1.482759_g59017_i0reverse_frame_2 - 0.1 11.5 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family Herpes_LMP2 PF07415.11 NODE_66956_length_238_cov_1.517241_g59015_i0forward_frame_2 - 0.08 11.7 0.7 0.084 11.6 0.7 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein Nucleoside_tran PF01733.18 NODE_66951_length_238_cov_1.571429_g59010_i0forward_frame_3 - 0.00061 19.3 0.3 0.00066 19.2 0.3 1.1 1 0 0 1 1 1 1 Nucleoside transporter SWIM PF04434.17 NODE_66946_length_238_cov_1.576355_g59005_i0reverse_frame_2 - 1.8 8.3 0.0 1.8 8.3 0.0 2.4 2 0 0 2 2 2 0 SWIM zinc finger Kinesin PF00225.23 NODE_66946_length_238_cov_1.576355_g59005_i0forward_frame_2 - 5.1e-11 42.1 0.1 5.5e-11 42.0 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_66946_length_238_cov_1.576355_g59005_i0forward_frame_2 - 0.017 15.1 0.3 0.017 15.1 0.3 1.1 1 0 0 1 1 1 0 Microtubule binding DUF1896 PF08989.10 NODE_66946_length_238_cov_1.576355_g59005_i0forward_frame_2 - 0.048 13.8 0.0 0.049 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1896) Rotamase_2 PF13145.6 NODE_66945_length_238_cov_1.591133_g59004_i0reverse_frame_2 - 0.0069 17.2 0.4 0.0069 17.2 0.4 1.4 2 0 0 2 2 2 1 PPIC-type PPIASE domain MurJ PF03023.14 NODE_66944_length_238_cov_1.605911_g59003_i0forward_frame_2 - 1.1e-22 80.3 0.3 1.2e-22 80.2 0.3 1.0 1 0 0 1 1 1 1 Lipid II flippase MurJ IFP_35_N PF07334.13 NODE_66943_length_238_cov_1.610837_g59002_i0forward_frame_2 - 0.047 13.8 0.2 0.14 12.3 0.2 1.8 1 1 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus pKID PF02173.17 NODE_66940_length_238_cov_1.635468_g58999_i0reverse_frame_2 - 0.073 12.6 0.4 0.1 12.1 0.4 1.3 1 0 0 1 1 1 0 pKID domain B3R PF17057.5 NODE_66940_length_238_cov_1.635468_g58999_i0forward_frame_2 - 0.25 11.6 2.4 0.27 11.5 0.1 1.8 1 1 1 2 2 2 0 Poxviridae B3 protein Peptidase_S11 PF00768.20 NODE_66939_length_238_cov_1.640394_g58998_i0reverse_frame_2 - 0.0034 16.9 0.0 0.0034 16.9 0.0 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Nab2 PF11517.8 NODE_66937_length_238_cov_1.699507_g58996_i0reverse_frame_2 - 0.19 12.1 0.0 0.22 11.8 0.0 1.1 1 0 0 1 1 1 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) PDGF_N PF04692.13 NODE_66936_length_238_cov_1.699507_g58995_i0reverse_frame_3 - 0.047 14.5 0.1 0.052 14.3 0.1 1.2 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region LRR_RI_capping PF18779.1 NODE_66930_length_238_cov_1.793103_g58989_i0forward_frame_2 - 0.015 14.9 0.1 0.024 14.3 0.1 1.3 1 0 0 1 1 1 0 Capping Ribonuclease inhibitor Leucine Rich Repeat PPR_3 PF13812.6 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 3e-07 30.4 0.1 4.2e-07 29.9 0.1 1.3 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 4.2e-07 30.1 0.0 6.1e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 PPR repeat family PPR_long PF17177.4 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 0.00023 20.6 0.0 0.00028 20.3 0.0 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP Z1 PF10593.9 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 0.049 13.1 0.1 0.063 12.8 0.1 1.1 1 0 0 1 1 1 0 Z1 domain RPN7 PF10602.9 NODE_66928_length_238_cov_1.812808_g58987_i0forward_frame_3 - 0.089 12.5 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 26S proteasome subunit RPN7 DUF3091 PF11291.8 NODE_66925_length_238_cov_1.866995_g58984_i0reverse_frame_3 - 0.045 13.9 3.4 0.053 13.7 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) SSTK-IP PF15836.5 NODE_66924_length_238_cov_1.901478_g58983_i0reverse_frame_2 - 0.009 16.1 0.0 0.01 16.0 0.0 1.0 1 0 0 1 1 1 1 SSTK-interacting protein, TSSK6-activating co-chaperone protein NPP PF08384.10 NODE_66923_length_238_cov_1.906404_g58982_i0reverse_frame_3 - 0.3 11.2 4.3 0.19 11.8 1.5 2.0 2 0 0 2 2 2 0 Pro-opiomelanocortin, N-terminal region E2F_CC-MB PF16421.5 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.0057 17.0 3.4 0.007 16.7 3.4 1.1 1 0 0 1 1 1 1 E2F transcription factor CC-MB domain DUF2103 PF09876.9 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.016 15.2 1.1 0.019 14.9 1.1 1.3 1 1 0 1 1 1 0 Predicted metal-binding protein (DUF2103) Tox-REase-3 PF15647.6 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.028 14.7 7.9 0.047 14.0 7.9 1.5 1 1 0 1 1 1 0 Restriction endonuclease fold toxin 3 RuvX PF03652.15 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.05 14.0 1.5 0.059 13.8 1.5 1.1 1 0 0 1 1 1 0 Holliday junction resolvase Phage_min_cap2 PF06152.11 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.12 11.3 9.2 0.15 10.9 9.2 1.3 1 1 0 1 1 1 0 Phage minor capsid protein 2 Mgr1 PF08602.10 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.4 9.5 6.4 0.42 9.4 6.4 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit DUF4446 PF14584.6 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 0.44 10.5 6.3 0.65 10.0 6.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) FERM_M PF00373.18 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 4.6 7.7 7.0 1.8 9.0 2.2 1.9 1 1 1 2 2 2 0 FERM central domain LMBR1 PF04791.16 NODE_66920_length_238_cov_1.916256_g58979_i0reverse_frame_2 - 7.8 5.3 6.2 8.2 5.2 6.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Lamprin PF06403.11 NODE_66917_length_238_cov_1.940887_g58976_i0forward_frame_2 - 0.0033 17.4 1.5 0.004 17.1 1.5 1.1 1 0 0 1 1 1 1 Lamprin DUF1068 PF06364.12 NODE_66916_length_238_cov_1.985222_g58975_i0reverse_frame_2 - 0.035 14.0 0.7 0.039 13.8 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) AFOR_N PF02730.15 NODE_66915_length_238_cov_2.064039_g58974_i0reverse_frame_3 - 2.5e-17 63.4 0.0 2.9e-17 63.2 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Zn_Tnp_IS1 PF03811.13 NODE_66915_length_238_cov_2.064039_g58974_i0reverse_frame_2 - 0.054 13.2 0.8 0.054 13.2 0.8 2.5 3 0 0 3 3 3 0 InsA N-terminal domain EPSP_synthase PF00275.20 NODE_66911_length_238_cov_2.108374_g58970_i0forward_frame_2 - 9.3e-18 64.1 0.0 1e-17 64.0 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DUF1487 PF07368.11 NODE_66911_length_238_cov_2.108374_g58970_i0forward_frame_2 - 0.09 12.2 0.0 0.095 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) Glucan_synthase PF02364.15 NODE_66907_length_238_cov_2.152709_g58966_i0reverse_frame_2 - 0.018 13.3 0.1 0.018 13.2 0.1 1.0 1 0 0 1 1 1 0 1,3-beta-glucan synthase component TSC22 PF01166.18 NODE_66900_length_238_cov_2.349754_g58959_i0reverse_frame_3 - 0.0067 16.7 2.4 0.01 16.2 0.2 2.1 1 1 1 2 2 2 1 TSC-22/dip/bun family Cyclin PF08613.11 NODE_66897_length_238_cov_2.512315_g58956_i0reverse_frame_2 - 3.8e-14 53.4 0.0 4.4e-14 53.2 0.0 1.0 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 NODE_66897_length_238_cov_2.512315_g58956_i0reverse_frame_2 - 5.7e-08 32.6 0.0 6.4e-08 32.4 0.0 1.0 1 0 0 1 1 1 1 Cyclin, N-terminal domain CD52 PF15116.6 NODE_66893_length_238_cov_2.591133_g58952_i0reverse_frame_3 - 0.14 12.3 0.2 0.23 11.5 0.2 1.3 1 0 0 1 1 1 0 CAMPATH-1 antigen NOA36 PF06524.12 NODE_66887_length_238_cov_2.753695_g58946_i0reverse_frame_3 - 1.1 8.5 5.2 3.8 6.8 0.8 2.0 1 1 1 2 2 2 0 NOA36 protein SMP_2 PF10144.9 NODE_66886_length_238_cov_2.753695_g58945_i0forward_frame_3 - 2.9e-26 92.0 0.1 3.1e-26 91.9 0.1 1.0 1 0 0 1 1 1 1 Bacterial virulence factor haemolysin CHASE8 PF17152.4 NODE_66886_length_238_cov_2.753695_g58945_i0forward_frame_3 - 0.00043 20.5 0.1 0.00058 20.1 0.1 1.3 1 1 0 1 1 1 1 Periplasmic sensor domain Beta_protein PF14350.6 NODE_66886_length_238_cov_2.753695_g58945_i0forward_frame_3 - 0.072 12.5 0.0 0.072 12.5 0.0 1.0 1 0 0 1 1 1 0 Beta protein PCSK9_C2 PF18464.1 NODE_66886_length_238_cov_2.753695_g58945_i0forward_frame_2 - 0.0064 16.5 0.9 0.009 16.0 0.9 1.3 1 0 0 1 1 1 1 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Abhydrolase_1 PF00561.20 NODE_66885_length_238_cov_2.837438_g58944_i0forward_frame_2 - 0.0001 22.0 0.0 0.00011 22.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold LCAT PF02450.15 NODE_66885_length_238_cov_2.837438_g58944_i0forward_frame_2 - 0.0011 18.2 0.0 0.0012 18.0 0.0 1.0 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase Hydrolase_4 PF12146.8 NODE_66885_length_238_cov_2.837438_g58944_i0forward_frame_2 - 0.0083 15.4 0.0 0.0091 15.3 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF1749 PF08538.10 NODE_66885_length_238_cov_2.837438_g58944_i0forward_frame_2 - 0.035 13.2 0.0 0.038 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1749) TROVE PF05731.11 NODE_66884_length_238_cov_2.847291_g58943_i0forward_frame_2 - 0.078 12.0 0.8 0.08 12.0 0.8 1.0 1 0 0 1 1 1 0 TROVE domain HRDC PF00570.23 NODE_66883_length_238_cov_2.866995_g58942_i0forward_frame_3 - 0.052 13.5 0.5 0.083 12.9 0.5 1.3 1 0 0 1 1 1 0 HRDC domain DUF3360 PF11840.8 NODE_66882_length_238_cov_2.896552_g58941_i0reverse_frame_2 - 0.052 12.3 0.0 0.058 12.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3360) Zf_RING PF16744.5 NODE_66881_length_238_cov_3.054187_g58940_i0reverse_frame_3 - 0.037 14.1 0.2 0.068 13.3 0.2 1.5 1 0 0 1 1 1 0 KIAA1045 RING finger DUF5592 PF17332.2 NODE_66881_length_238_cov_3.054187_g58940_i0reverse_frame_3 - 0.088 13.4 0.7 0.11 13.0 0.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5592) Nsp1 PF11501.8 NODE_66878_length_238_cov_3.133005_g58937_i0forward_frame_2 - 0.074 13.1 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 Non structural protein Nsp1 Avian_gp85 PF03708.14 NODE_66872_length_238_cov_3.743842_g58931_i0reverse_frame_3 - 0.061 12.5 1.8 0.067 12.4 1.8 1.0 1 0 0 1 1 1 0 Avian retrovirus envelope protein, gp85 RVT_2 PF07727.14 NODE_66868_length_238_cov_5.798030_g58927_i0reverse_frame_3 - 5.7e-05 22.9 0.0 6.2e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) LEAP-2 PF07359.11 NODE_66867_length_238_cov_14.049261_g58926_i0forward_frame_2 - 0.12 12.2 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) DUF3950 PF13132.6 NODE_66864_length_238_cov_24.655172_g58923_i0forward_frame_2 - 1.8 8.4 6.6 8.8 6.2 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF3950) DUF3499 PF12005.8 NODE_66861_length_238_cov_34.477833_g58920_i0reverse_frame_2 - 0.057 14.0 0.0 0.065 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3499) Herpes_LMP1 PF05297.11 NODE_66860_length_238_cov_34.896552_g58919_i0forward_frame_2 - 0.27 10.4 0.5 0.29 10.3 0.5 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) RRM_1 PF00076.22 NODE_66857_length_238_cov_39.527094_g58916_i0reverse_frame_2 - 0.0017 18.1 0.0 0.0043 16.9 0.0 1.7 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 NODE_66857_length_238_cov_39.527094_g58916_i0reverse_frame_2 - 0.029 14.2 0.0 0.039 13.8 0.0 1.2 1 0 0 1 1 1 0 Occluded RNA-recognition motif SET_assoc PF11767.8 NODE_66857_length_238_cov_39.527094_g58916_i0reverse_frame_2 - 0.029 14.0 0.0 0.039 13.6 0.0 1.2 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated DUF4280 PF14107.6 NODE_66856_length_238_cov_39.748768_g58915_i0reverse_frame_2 - 0.034 15.0 0.3 0.04 14.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4280) CPSase_sm_chain PF00988.22 NODE_66856_length_238_cov_39.748768_g58915_i0reverse_frame_2 - 0.23 11.3 0.0 0.25 11.2 0.0 1.1 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase small chain, CPSase domain GAPT PF11770.8 NODE_66855_length_238_cov_43.354680_g58914_i0forward_frame_3 - 0.0035 17.2 0.4 0.0038 17.1 0.4 1.2 1 0 0 1 1 1 1 GRB2-binding adapter (GAPT) zf-CDGSH PF09360.10 NODE_66853_length_238_cov_45.187192_g58912_i0forward_frame_3 - 0.057 13.6 0.5 0.087 13.1 0.5 1.4 1 1 0 1 1 1 0 Iron-binding zinc finger CDGSH type DUF5304 PF17230.2 NODE_66851_length_238_cov_46.674877_g58910_i0reverse_frame_3 - 0.089 13.0 0.0 0.089 13.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5304) NOB1_Zn_bind PF08772.11 NODE_66851_length_238_cov_46.674877_g58910_i0forward_frame_2 - 0.096 12.9 8.4 0.13 12.4 8.4 1.2 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like VKG_Carbox PF05090.14 NODE_66851_length_238_cov_46.674877_g58910_i0forward_frame_2 - 0.11 11.3 0.0 0.13 11.1 0.0 1.0 1 0 0 1 1 1 0 Vitamin K-dependent gamma-carboxylase Rpn3_C PF08375.11 NODE_66847_length_238_cov_52.965517_g58906_i0reverse_frame_2 - 0.22 12.0 0.8 0.44 11.0 0.1 1.8 1 1 1 2 2 2 0 Proteasome regulatory subunit C-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks339.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks339.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks339.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks339.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UPF0449 PF15136.6 ORF48668 - 0.36 11.3 4.2 0.8 10.2 0.0 2.9 2 1 0 2 2 2 0 Uncharacterised protein family UPF0449 SRP68 PF16969.5 ORF40428 - 3e-35 122.3 0.1 6.5e-27 94.8 0.0 2.0 1 1 1 2 2 2 2 RNA-binding signal recognition particle 68 TPR_12 PF13424.6 ORF40428 - 0.56 10.5 3.8 1.2 9.4 0.5 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat DHHC PF01529.20 ORF36477 - 9.7e-27 93.7 17.6 9.7e-27 93.7 17.6 2.4 2 0 0 2 2 2 1 DHHC palmitoyltransferase UPF0242 PF06785.11 ORF36477 - 0.0013 18.9 1.4 0.0013 18.9 1.4 2.3 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus Cadherin_C_2 PF16492.5 ORF36477 - 1.1 10.1 4.5 5.9 7.7 0.1 3.3 3 1 0 3 3 3 0 Cadherin cytoplasmic C-terminal His_Phos_2 PF00328.22 ORF35342 - 4.6e-19 69.0 0.1 2e-17 63.6 0.2 2.2 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 2) AAA_18 PF13238.6 ORF34848 - 2.8e-05 24.7 6.7 8.4e-05 23.1 0.4 3.3 1 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 ORF34848 - 0.0011 18.3 0.1 0.0086 15.4 0.0 2.5 2 0 0 2 2 2 1 Zeta toxin AAA_17 PF13207.6 ORF34848 - 0.0011 19.4 1.0 0.011 16.2 0.0 2.9 2 1 1 3 3 3 1 AAA domain ADK PF00406.22 ORF34848 - 0.0015 18.6 0.6 0.0081 16.3 0.0 2.4 2 1 0 2 2 2 1 Adenylate kinase AAA_33 PF13671.6 ORF34848 - 0.0053 16.9 0.0 0.022 14.9 0.0 2.2 2 1 0 2 2 2 1 AAA domain Cytidylate_kin PF02224.18 ORF34848 - 0.0053 16.5 0.5 0.015 15.0 0.0 2.1 2 1 0 2 2 2 1 Cytidylate kinase TsaE PF02367.17 ORF34848 - 0.02 14.9 0.0 0.042 13.9 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_29 PF13555.6 ORF34848 - 0.044 13.5 0.0 0.096 12.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF34848 - 0.046 13.6 0.6 0.13 12.2 0.0 2.1 2 0 0 2 2 2 0 RsgA GTPase CPT PF07931.12 ORF34848 - 0.067 13.0 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein SKI PF01202.22 ORF34848 - 0.11 12.7 4.6 0.13 12.3 0.1 3.2 3 1 1 4 4 4 0 Shikimate kinase ABC_tran PF00005.27 ORF34848 - 0.52 10.8 9.9 3.3 8.2 9.8 2.6 1 1 0 1 1 1 0 ABC transporter Ank_2 PF12796.7 ORF31310 - 5.3e-11 43.0 0.2 5.6e-07 30.1 0.1 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF31310 - 3.2e-10 40.0 0.2 1.6e-06 28.2 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF31310 - 8.8e-10 38.9 0.1 1.3e-08 35.2 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF31310 - 1.7e-06 27.9 0.0 0.13 12.9 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF31310 - 4.3e-06 26.9 0.0 0.0084 16.5 0.0 2.5 2 0 0 2 2 2 2 Ankyrin repeat RRM_1 PF00076.22 ORF31310 - 0.00058 19.6 0.0 0.0012 18.6 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Metallophos PF00149.28 ORF29855 - 1.9e-34 119.9 0.2 4.4e-34 118.8 0.1 1.6 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase CCDC-167 PF15188.6 ORF29855 - 0.12 12.7 3.6 16 5.9 0.0 2.5 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 Caveolin PF01146.17 ORF20750 - 3.9 7.4 9.4 0.53 10.2 1.2 2.9 2 1 1 3 3 3 0 Caveolin TRP PF06011.12 ORF151343 - 0.0016 17.3 31.7 0.11 11.2 24.8 3.1 1 1 1 2 2 2 1 Transient receptor potential (TRP) ion channel Peptidase_M41 PF01434.18 ORF142702 - 7.3e-62 208.6 0.0 1.3e-61 207.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 ORF142702 - 1.4e-26 93.5 0.6 2e-25 89.8 0.0 2.7 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF142702 - 1.3e-08 34.5 0.0 3.6e-08 33.1 0.0 1.8 1 0 0 1 1 1 1 AAA+ lid domain SAC3 PF12209.8 ORF142702 - 0.011 15.9 0.6 0.011 15.9 0.6 1.9 2 0 0 2 2 2 0 Leucine permease transcriptional regulator helical domain ECM1 PF05782.11 ORF142702 - 0.24 10.3 2.5 0.34 9.8 2.5 1.1 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) Band_7 PF01145.25 ORF142613 - 9e-30 104.0 1.5 1e-29 103.8 0.6 1.5 1 1 0 1 1 1 1 SPFH domain / Band 7 family HflK_N PF12221.8 ORF142613 - 2.2e-15 56.4 13.5 6.3e-15 54.9 13.5 1.9 1 0 0 1 1 1 1 Bacterial membrane protein N terminal DivIVA PF05103.13 ORF142613 - 0.081 13.0 2.5 0.14 12.2 2.5 1.4 1 0 0 1 1 1 0 DivIVA protein SCAB_CC PF16712.5 ORF142613 - 0.095 12.5 0.4 0.17 11.7 0.4 1.3 1 0 0 1 1 1 0 Coiled-coil regions of plant-specific actin-binding protein GHMP_kinases_C PF08544.13 ORF142613 - 0.23 11.9 0.9 0.71 10.3 0.9 1.8 1 0 0 1 1 1 0 GHMP kinases C terminal cNMP_binding PF00027.29 ORF141940 - 4.2e-41 138.9 0.0 9.2e-21 73.7 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Cupin_2 PF07883.11 ORF141940 - 0.013 15.2 0.0 0.072 12.8 0.0 2.0 2 0 0 2 2 2 0 Cupin domain Vasculin PF15337.6 ORF141940 - 0.15 13.0 4.7 0.43 11.4 4.7 1.8 1 0 0 1 1 1 0 Vascular protein family Vasculin-like 1 DUF3245 PF11595.8 ORF141940 - 0.23 11.9 5.8 0.59 10.6 5.8 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3245) AAA_18 PF13238.6 ORF129413 - 2.8e-05 24.7 6.7 8.4e-05 23.1 0.4 3.3 1 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 ORF129413 - 0.0011 18.3 0.1 0.0086 15.4 0.0 2.5 2 0 0 2 2 2 1 Zeta toxin AAA_17 PF13207.6 ORF129413 - 0.0011 19.4 1.0 0.011 16.2 0.0 2.9 2 1 1 3 3 3 1 AAA domain ADK PF00406.22 ORF129413 - 0.0015 18.6 0.6 0.0081 16.3 0.0 2.4 2 1 0 2 2 2 1 Adenylate kinase AAA_33 PF13671.6 ORF129413 - 0.0053 16.9 0.0 0.022 14.9 0.0 2.2 2 1 0 2 2 2 1 AAA domain Cytidylate_kin PF02224.18 ORF129413 - 0.0053 16.5 0.5 0.015 15.0 0.0 2.1 2 1 0 2 2 2 1 Cytidylate kinase TsaE PF02367.17 ORF129413 - 0.02 14.9 0.0 0.042 13.9 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_29 PF13555.6 ORF129413 - 0.044 13.5 0.0 0.096 12.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF129413 - 0.046 13.6 0.6 0.13 12.2 0.0 2.1 2 0 0 2 2 2 0 RsgA GTPase CPT PF07931.12 ORF129413 - 0.067 13.0 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein SKI PF01202.22 ORF129413 - 0.11 12.7 4.6 0.13 12.3 0.1 3.2 3 1 1 4 4 4 0 Shikimate kinase ABC_tran PF00005.27 ORF129413 - 0.52 10.8 9.9 3.3 8.2 9.8 2.6 1 1 0 1 1 1 0 ABC transporter MS_channel PF00924.18 ORF120025 - 1e-20 74.2 5.7 1.7e-20 73.4 5.7 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel ETRAMP PF09716.10 ORF120025 - 0.049 13.7 0.0 0.13 12.3 0.0 1.7 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Zip PF02535.22 ORF110865 - 5.9e-44 150.6 12.9 8e-44 150.2 12.9 1.2 1 0 0 1 1 1 1 ZIP Zinc transporter Nuc_sug_transp PF04142.15 ORF106313 - 1.2e-12 47.6 0.1 2.4e-12 46.7 0.1 1.4 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF106313 - 1.6e-07 31.5 24.5 0.00016 21.8 2.9 2.8 2 1 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 ORF106313 - 0.00058 19.2 9.2 0.00058 19.2 9.2 1.6 1 1 0 1 1 1 1 UAA transporter family TMEM234 PF10639.9 ORF106313 - 0.00067 19.7 1.0 0.0017 18.3 1.0 1.7 1 0 0 1 1 1 1 Putative transmembrane family 234 TPT PF03151.16 ORF106313 - 0.011 15.1 1.8 0.011 15.1 1.8 1.8 2 0 0 2 2 2 0 Triose-phosphate Transporter family PhaG_MnhG_YufB PF03334.14 ORF106313 - 0.012 15.8 1.8 0.012 15.8 1.8 3.9 3 1 1 4 4 4 0 Na+/H+ antiporter subunit DMT_6 PF04342.12 ORF106313 - 0.016 15.4 11.4 0.51 10.6 1.0 2.6 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) CRT-like PF08627.10 ORF106313 - 0.16 10.9 18.6 0.78 8.6 10.1 3.0 2 1 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like DUF3935 PF13071.6 ORF106313 - 2.7 8.6 11.6 0.25 11.9 1.3 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF3935) Lectin_C PF00059.21 ORF100159 - 7.8e-24 84.5 8.6 1.8e-12 47.9 1.4 2.8 3 0 0 3 3 3 2 Lectin C-type domain UL45 PF05473.12 ORF100159 - 8.1e-06 25.6 0.3 0.041 13.5 0.1 2.5 2 0 0 2 2 2 2 UL45 protein, carbohydrate-binding C-type lectin-like Amino_oxidase PF01593.24 ORF97810 - 8.3e-18 64.9 0.4 1.4e-17 64.2 0.1 1.5 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Cullin PF00888.22 ORF97150 - 0.0061 15.2 0.0 0.008 14.8 0.0 1.1 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 ORF97150 - 0.092 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Cullin protein neddylation domain KIAA1430 PF13879.6 ORF94236 - 2.4e-26 92.4 11.8 2.4e-26 92.4 11.8 3.6 3 1 0 3 3 3 1 KIAA1430 homologue WhiA_N PF10298.9 ORF94236 - 1.2 9.3 3.9 4.1 7.5 0.3 3.0 3 0 0 3 3 3 0 WhiA N-terminal LAGLIDADG-like domain DUF2070 PF09843.9 ORF90939 - 0.66 8.2 9.7 0.95 7.7 9.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) WES_acyltransf PF03007.16 ORF90635 - 7.7e-09 35.7 0.0 1.3e-08 35.0 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF90635 - 7.8e-09 35.6 0.0 1.4e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Band_7_1 PF13421.6 ORF90635 - 0.02 14.6 0.1 0.039 13.6 0.1 1.5 1 0 0 1 1 1 0 SPFH domain-Band 7 family BLIP PF07467.11 ORF90635 - 0.11 13.1 0.2 4.2 8.0 0.0 2.7 3 0 0 3 3 3 0 Beta-lactamase inhibitor (BLIP) Iso_dh PF00180.20 ORF89429 - 1.8e-73 247.7 0.0 2e-73 247.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Phe_ZIP PF08916.11 ORF89429 - 0.032 15.0 0.4 0.15 12.8 0.1 2.2 2 0 0 2 2 2 0 Phenylalanine zipper Peptidase_C13 PF01650.18 ORF87707 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family PP2C PF00481.21 ORF87020 - 4.3e-30 105.2 0.2 5.6e-30 104.8 0.2 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF87020 - 3e-10 40.3 0.7 0.00016 21.7 0.0 2.2 1 1 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) PP2C_2 PF13672.6 ORF87020 - 0.0029 17.3 6.6 0.0051 16.5 5.4 1.9 1 1 1 2 2 2 1 Protein phosphatase 2C Pkinase PF00069.25 ORF86445 - 2.1e-28 99.5 0.2 3e-28 98.9 0.2 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86445 - 9.5e-18 64.4 0.0 1.3e-17 64.0 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF86445 - 1.4e-07 30.7 0.1 1.4e-07 30.7 0.1 1.9 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF86445 - 7.1e-06 26.1 0.0 0.0014 18.6 0.0 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF86445 - 0.0018 17.9 0.1 0.26 10.9 0.0 2.6 2 0 0 2 2 2 1 RIO1 family Kdo PF06293.14 ORF86445 - 0.0059 16.0 0.1 0.011 15.2 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pox_ser-thr_kin PF05445.11 ORF86445 - 0.0092 15.0 0.3 0.017 14.1 0.3 1.4 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase DinB PF05163.12 ORF86445 - 0.087 12.7 0.1 0.14 12.1 0.1 1.3 1 0 0 1 1 1 0 DinB family IQ PF00612.27 ORF84743 - 2.1e-08 33.2 16.4 0.0051 16.5 3.2 4.7 4 0 0 4 4 4 4 IQ calmodulin-binding motif NAD_kinase PF01513.21 ORF74114 - 8.3e-15 54.7 0.0 1.1e-14 54.4 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 ORF74114 - 0.037 13.6 0.0 0.068 12.8 0.0 1.4 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain EF-hand_7 PF13499.6 ORF72913 - 1.1e-12 48.2 10.0 0.00031 21.1 1.8 4.2 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF72913 - 1.7e-11 42.8 15.5 0.021 14.3 2.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF72913 - 1.7e-09 36.8 9.1 0.064 13.2 0.0 5.1 5 0 0 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF72913 - 2.1e-08 33.9 14.2 0.003 17.4 1.9 4.5 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF72913 - 0.014 14.9 7.4 0.72 9.5 0.0 4.1 5 0 0 5 5 5 0 EF hand EF-hand_4 PF12763.7 ORF72913 - 0.051 13.5 8.6 0.071 13.1 0.3 3.5 4 0 0 4 4 4 0 Cytoskeletal-regulatory complex EF hand HGTP_anticodon2 PF12745.7 ORF72913 - 0.088 12.3 0.2 0.19 11.2 0.2 1.5 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs SPARC_Ca_bdg PF10591.9 ORF72913 - 0.11 12.8 0.6 36 4.7 0.1 3.3 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region DUF3515 PF12028.8 ORF72913 - 0.16 11.7 0.0 0.37 10.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3515) Xan_ur_permease PF00860.20 ORF51723 - 1.2e-106 356.7 37.9 1.6e-106 356.3 37.9 1.2 1 0 0 1 1 1 1 Permease family SprB PF13573.6 ORF51723 - 0.032 14.0 0.3 0.066 13.0 0.3 1.5 1 0 0 1 1 1 0 SprB repeat CBP_BcsG PF11658.8 ORF51723 - 0.48 8.7 0.8 0.73 8.2 0.8 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG YtpI PF14007.6 ORF51723 - 0.95 9.6 6.7 0.81 9.9 0.7 3.0 2 0 0 2 2 2 0 YtpI-like protein Nup35_RRM_2 PF14605.6 ORF34370 - 0.013 15.5 0.0 0.028 14.4 0.0 1.6 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_1 PF00076.22 ORF34370 - 0.017 15.0 0.0 0.12 12.2 0.0 2.2 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Peptidase_C13 PF01650.18 ORF34118 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family EF-hand_7 PF13499.6 ORF33667 - 1.1e-12 48.2 10.0 0.00031 21.1 1.8 4.2 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF33667 - 1.7e-11 42.8 15.5 0.021 14.3 2.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF33667 - 1.7e-09 36.8 9.1 0.064 13.2 0.0 5.1 5 0 0 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 ORF33667 - 2.1e-08 33.9 14.2 0.003 17.4 1.9 4.5 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF33667 - 0.014 14.9 7.4 0.72 9.5 0.0 4.1 5 0 0 5 5 5 0 EF hand EF-hand_4 PF12763.7 ORF33667 - 0.051 13.5 8.6 0.071 13.1 0.3 3.5 4 0 0 4 4 4 0 Cytoskeletal-regulatory complex EF hand HGTP_anticodon2 PF12745.7 ORF33667 - 0.088 12.3 0.2 0.19 11.2 0.2 1.5 1 0 0 1 1 1 0 Anticodon binding domain of tRNAs SPARC_Ca_bdg PF10591.9 ORF33667 - 0.11 12.8 0.6 36 4.7 0.1 3.3 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region DUF3515 PF12028.8 ORF33667 - 0.16 11.7 0.0 0.37 10.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3515) THF_DHG_CYH PF00763.23 ORF30862 - 0.001 19.3 0.0 0.0022 18.3 0.0 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DUF3343 PF11823.8 ORF30862 - 0.065 12.7 0.3 0.82 9.2 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) Peptidase_C13 PF01650.18 ORF26302 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family DUF2070 PF09843.9 ORF25303 - 0.66 8.2 9.7 0.95 7.7 9.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ATPgrasp_N PF18130.1 ORF22079 - 1.6e-20 73.4 0.2 6.1e-20 71.6 0.2 2.0 1 0 0 1 1 1 1 ATP-grasp N-terminal domain ATP-grasp_4 PF13535.6 ORF22079 - 8.2e-20 71.0 0.0 6.9e-19 68.0 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 ORF22079 - 2.8e-11 43.7 0.0 5.1e-10 39.6 0.0 2.3 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 ORF22079 - 1e-09 38.2 0.0 0.0011 18.6 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.6 ORF22079 - 3.4e-09 36.5 0.0 1.6e-07 31.1 0.0 2.9 2 1 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.13 ORF22079 - 9e-09 35.2 0.1 0.0017 18.0 0.1 2.7 1 1 0 2 2 2 2 D-ala D-ala ligase C-terminus LAL_C2 PF18603.1 ORF22079 - 2.3e-05 24.5 0.2 8.3e-05 22.7 0.0 2.0 2 0 0 2 2 2 1 L-amino acid ligase C-terminal domain 2 ATP-grasp PF02222.22 ORF22079 - 3e-05 23.7 0.0 0.0078 15.8 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain GARS_A PF01071.19 ORF22079 - 0.00016 21.5 0.1 0.2 11.4 0.0 3.2 3 0 0 3 3 3 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.6 ORF22079 - 0.026 14.0 0.1 0.048 13.1 0.1 1.4 1 0 0 1 1 1 0 ATP-grasp domain RimK PF08443.11 ORF22079 - 0.032 13.8 0.0 0.2 11.2 0.0 2.2 2 0 0 2 2 2 0 RimK-like ATP-grasp domain NIF PF03031.18 ORF19233 - 1.7e-49 167.6 0.2 3.9e-49 166.4 0.2 1.6 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Hist_deacetyl PF00850.19 ORF141351 - 2.6e-19 69.8 0.0 3.6e-19 69.4 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Peptidase_C13 PF01650.18 ORF134802 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family GTP_cyclohydro2 PF00925.20 ORF134377 - 1.1e-18 67.4 0.0 1.6e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 GTP cyclohydrolase II GTP_CH_N PF12471.8 ORF134377 - 3.3e-12 46.5 0.1 1.3e-11 44.6 0.1 1.9 1 1 0 1 1 1 1 GTP cyclohydrolase N terminal DUF5608 PF18356.1 ORF134377 - 0.085 12.9 0.1 1.7 8.7 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5608) Ank_2 PF12796.7 ORF125716 - 2.4e-30 104.9 0.4 2e-12 47.5 0.0 3.9 3 1 1 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF125716 - 6.1e-29 100.0 1.1 1.5e-09 38.2 0.0 4.5 5 0 0 5 5 5 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF125716 - 2.3e-22 78.8 4.9 3.9e-07 30.2 0.0 5.4 2 1 4 6 6 6 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF125716 - 1.5e-21 75.8 6.9 0.00034 20.9 0.0 7.6 7 0 0 7 7 7 4 Ankyrin repeat Ank_3 PF13606.6 ORF125716 - 6.4e-19 66.1 4.2 0.023 15.2 0.0 7.5 7 1 1 8 8 8 5 Ankyrin repeat NAD_binding_1 PF00175.21 ORF12523 - 3.6e-28 98.4 0.3 3.2e-27 95.3 0.1 2.2 2 0 0 2 2 2 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF12523 - 0.0065 16.8 0.0 0.015 15.6 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase FAD-binding domain DUF1451 PF07295.11 ORF12523 - 0.083 12.9 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain Peptidase_C13 PF01650.18 ORF11807 - 3.3e-103 344.6 1.0 3.3e-103 344.6 1.0 1.5 2 0 0 2 2 2 1 Peptidase C13 family Iso_dh PF00180.20 ORF112799 - 1.8e-73 247.7 0.0 2e-73 247.5 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Phe_ZIP PF08916.11 ORF112799 - 0.032 15.0 0.4 0.15 12.8 0.1 2.2 2 0 0 2 2 2 0 Phenylalanine zipper Abhydro_lipase PF04083.16 ORF110585 - 8.4e-19 66.9 0.0 1.6e-18 66.0 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF110585 - 1.4e-11 44.5 0.2 2.5e-11 43.7 0.2 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold Ank_2 PF12796.7 ORF103594 - 4.6e-23 81.6 0.6 2.7e-14 53.5 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF103594 - 1.4e-20 73.0 5.9 1.8e-06 28.1 0.1 5.3 1 1 4 5 5 5 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF103594 - 1.8e-20 73.0 4.0 1.6e-07 31.7 0.1 4.0 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF103594 - 5.1e-17 60.2 3.0 0.009 16.5 0.0 5.6 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF103594 - 1.8e-14 53.4 7.8 0.0033 17.8 0.2 5.4 5 0 0 5 5 5 3 Ankyrin repeat Glycos_transf_1 PF00534.20 ORF103594 - 4.1e-07 29.7 0.2 8.1e-07 28.7 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF103594 - 1.8e-06 28.4 0.2 4.9e-06 27.0 0.2 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 FAD_binding_5 PF00941.21 ORF93647 - 4e-48 163.4 0.0 5.8e-48 162.8 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 ORF93647 - 7.4e-07 29.3 1.5 3.4e-06 27.2 0.6 2.4 2 1 1 3 3 3 1 CO dehydrogenase flavoprotein C-terminal domain bZIP_1 PF00170.21 ORF91934 - 1.1e-07 31.8 3.4 1.1e-07 31.8 3.4 3.5 3 0 0 3 3 3 2 bZIP transcription factor bZIP_2 PF07716.15 ORF91934 - 0.00047 20.2 3.7 0.00047 20.2 3.7 3.2 4 0 0 4 4 4 1 Basic region leucine zipper JIP_LZII PF16471.5 ORF91934 - 0.061 13.5 0.1 0.061 13.5 0.1 2.9 3 0 0 3 3 3 0 JNK-interacting protein leucine zipper II CRIC_ras_sig PF10534.9 ORF91934 - 0.072 13.3 0.1 0.23 11.7 0.1 1.9 1 0 0 1 1 1 0 Connector enhancer of kinase suppressor of ras NPV_P10 PF05531.12 ORF91934 - 1.8 9.1 4.0 5.6 7.5 0.1 3.0 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein ZapB PF06005.12 ORF91934 - 2 8.9 9.0 3.9 8.0 0.0 3.5 3 0 0 3 3 3 0 Cell division protein ZapB DUF2205 PF10224.9 ORF91934 - 4.2 7.4 6.6 0.39 10.8 0.1 2.5 3 0 0 3 3 3 0 Short coiled-coil protein Asp PF00026.23 ORF89828 - 2.4e-45 155.3 12.3 3.2e-45 154.9 12.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF89828 - 3.2e-06 27.5 9.5 0.00024 21.4 0.4 3.0 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF89828 - 0.0078 16.0 0.0 0.015 15.1 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF89828 - 0.023 15.3 0.3 3.7 8.3 0.1 2.9 2 1 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 ORF89828 - 0.054 14.1 0.1 6 7.5 0.0 3.5 3 1 0 3 3 3 0 gag-polyprotein putative aspartyl protease Rubredoxin PF00301.20 ORF63121 - 3.6e-21 74.9 2.5 7.2e-21 74.0 2.5 1.5 1 0 0 1 1 1 1 Rubredoxin Flavodoxin_1 PF00258.25 ORF63121 - 8.3e-13 48.8 0.0 1.2e-12 48.2 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin DnaT PF17948.1 ORF63121 - 0.033 13.9 0.1 0.09 12.5 0.1 1.7 1 0 0 1 1 1 0 DnaT DNA-binding domain CNOT1_TTP_bind PF16417.5 ORF61235 - 4.2e-20 71.7 0.0 7.7e-20 70.9 0.0 1.4 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain Asp PF00026.23 ORF57922 - 2.4e-45 155.3 12.3 3.2e-45 154.9 12.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF57922 - 3.2e-06 27.5 9.5 0.00024 21.4 0.4 3.0 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF57922 - 0.0078 16.0 0.0 0.015 15.1 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF57922 - 0.024 15.3 0.3 3.7 8.3 0.1 2.9 2 1 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 ORF57922 - 0.057 14.0 0.1 6 7.5 0.0 3.5 3 1 0 3 3 3 0 gag-polyprotein putative aspartyl protease TMEM43 PF07787.12 ORF54967 - 8.3e-26 90.9 0.0 1.4e-25 90.1 0.0 1.4 1 1 0 1 1 1 1 Transmembrane protein 43 CrgA PF06781.12 ORF54967 - 1.1 9.4 2.7 2.5 8.2 0.8 2.3 2 0 0 2 2 2 0 Cell division protein CrgA DUF4064 PF13273.6 ORF54967 - 3.1 8.1 5.9 1.3 9.3 0.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) Actin PF00022.19 ORF48592 - 1.8e-86 290.3 0.0 3.5e-84 282.8 0.0 2.0 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF48592 - 0.0067 15.3 0.0 0.67 8.7 0.0 2.2 2 0 0 2 2 2 2 MreB/Mbl protein zf-C3Hc3H PF13891.6 ORF48592 - 0.015 15.7 0.1 0.033 14.6 0.1 1.6 1 0 0 1 1 1 0 Potential DNA-binding domain Chorismate_bind PF00425.18 ORF47461 - 2.4e-82 276.4 0.0 3.1e-82 276.0 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 ORF47461 - 1e-09 38.7 0.2 1e-08 35.5 0.0 2.4 2 0 0 2 2 2 1 Anthranilate synthase component I, N terminal region HalX PF08663.10 ORF47461 - 0.0064 16.8 0.1 0.025 14.9 0.1 1.9 1 0 0 1 1 1 1 HalX domain Flg_hook PF02120.16 ORF47461 - 0.01 15.7 0.1 0.025 14.5 0.1 1.6 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK Lipase_GDSL_3 PF14606.6 ORF47461 - 0.037 14.2 0.0 4.4 7.4 0.0 2.4 2 0 0 2 2 2 0 GDSL-like Lipase/Acylhydrolase family TPR_12 PF13424.6 ORF47211 - 2.9e-12 46.7 3.0 1.5e-06 28.4 0.1 3.8 2 1 3 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF47211 - 5.3e-09 35.6 1.3 0.0066 16.6 0.2 4.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF47211 - 3e-06 26.8 12.9 0.0066 16.2 0.2 5.3 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF47211 - 7.9e-06 25.5 0.7 0.065 13.3 0.0 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF47211 - 0.0002 21.2 4.0 0.031 14.4 0.1 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat DUF410 PF04190.13 ORF47211 - 0.0086 15.9 0.8 0.014 15.2 0.2 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF410) TPR_14 PF13428.6 ORF47211 - 0.013 16.3 0.0 15 6.7 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF47211 - 0.061 14.0 0.0 0.39 11.4 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat ArnB_C PF18677.1 ORF47211 - 0.069 13.3 1.6 0.12 12.5 0.1 2.2 2 1 1 3 3 2 0 Archaellum regulatory network B, C-terminal domain UCH_1 PF13423.6 ORF47211 - 0.076 12.6 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase SURF2 PF05477.11 ORF47211 - 0.11 12.1 3.8 0.21 11.2 3.8 1.4 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) TPR_10 PF13374.6 ORF47211 - 0.12 12.3 0.3 71 3.5 0.0 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF47211 - 0.4 11.2 3.7 49 4.6 0.0 4.7 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF47211 - 0.47 11.2 2.8 2.1 9.2 0.1 3.3 4 1 1 5 5 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF47211 - 1.8 8.3 7.9 2.9 7.7 0.1 4.5 4 2 1 5 5 5 0 TPR repeat GntP_permease PF02447.16 ORF31901 - 7.8e-139 463.2 45.7 9.5e-139 462.9 45.7 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 ORF31901 - 2.9e-11 43.1 57.8 7.5e-11 41.8 57.8 1.5 1 1 0 1 1 1 1 Citrate transporter DctM PF06808.12 ORF31901 - 0.00057 18.8 20.9 0.00057 18.8 20.9 2.1 1 1 1 2 2 2 1 Tripartite ATP-independent periplasmic transporter, DctM component Na_H_antiport_2 PF13726.6 ORF31901 - 0.0033 17.5 11.0 0.0033 17.5 11.0 3.5 4 0 0 4 4 4 2 Na+-H+ antiporter family DUF3007 PF11460.8 ORF31901 - 8.3 6.7 6.4 17 5.7 2.0 3.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3007) bZIP_1 PF00170.21 ORF26603 - 1.1e-07 31.8 3.4 1.1e-07 31.8 3.4 3.5 3 0 0 3 3 3 2 bZIP transcription factor bZIP_2 PF07716.15 ORF26603 - 0.00047 20.2 3.7 0.00047 20.2 3.7 3.2 4 0 0 4 4 4 1 Basic region leucine zipper JIP_LZII PF16471.5 ORF26603 - 0.061 13.5 0.1 0.061 13.5 0.1 2.9 3 0 0 3 3 3 0 JNK-interacting protein leucine zipper II CRIC_ras_sig PF10534.9 ORF26603 - 0.072 13.3 0.1 0.23 11.7 0.1 1.9 1 0 0 1 1 1 0 Connector enhancer of kinase suppressor of ras NPV_P10 PF05531.12 ORF26603 - 1.8 9.1 4.0 5.6 7.5 0.1 3.0 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein ZapB PF06005.12 ORF26603 - 2 8.9 9.0 3.9 8.0 0.0 3.5 3 0 0 3 3 3 0 Cell division protein ZapB DUF2205 PF10224.9 ORF26603 - 4.2 7.4 6.6 0.39 10.8 0.1 2.5 3 0 0 3 3 3 0 Short coiled-coil protein His_Phos_2 PF00328.22 ORF23386 - 7.7e-15 55.1 7.2 9.3e-12 45.0 1.5 3.2 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) Voltage_CLC PF00654.20 ORF22041 - 3.3e-14 52.9 2.9 4.1e-14 52.6 2.9 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel AAA_28 PF13521.6 ORF2137 - 5.1e-29 101.6 0.0 7.5e-29 101.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain HTH_3 PF01381.22 ORF2137 - 1.7e-09 37.6 0.1 5.9e-09 35.9 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 ORF2137 - 6.4e-07 29.6 0.0 1.4e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 ORF2137 - 1.8e-05 24.6 0.0 7.8e-05 22.6 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Citrate_ly_lig PF08218.11 ORF2137 - 0.00072 19.3 0.0 0.022 14.5 0.0 2.6 3 0 0 3 3 3 1 Citrate lyase ligase C-terminal domain HTH_26 PF13443.6 ORF2137 - 0.0011 19.3 0.0 0.0049 17.3 0.0 2.0 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain CTP_transf_like PF01467.26 ORF2137 - 0.0015 18.7 0.1 0.017 15.3 0.0 2.3 2 0 0 2 2 2 1 Cytidylyltransferase-like MMR_HSR1 PF01926.23 ORF2137 - 0.023 14.8 0.3 0.049 13.7 0.3 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase FAD_syn PF06574.12 ORF2137 - 0.037 13.9 0.0 0.23 11.4 0.0 2.3 2 0 0 2 2 2 0 FAD synthetase HTH_37 PF13744.6 ORF2137 - 0.042 13.8 0.1 0.081 12.9 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain ABC_tran PF00005.27 ORF2137 - 0.046 14.2 0.0 0.41 11.2 0.0 2.2 2 0 0 2 2 2 0 ABC transporter AAA_29 PF13555.6 ORF2137 - 0.095 12.5 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Dynamin_N PF00350.23 ORF2137 - 0.2 11.7 0.4 0.41 10.7 0.4 1.5 1 0 0 1 1 1 0 Dynamin family OKR_DC_1 PF01276.20 ORF21216 - 9.8e-88 294.7 0.0 1.2e-87 294.4 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.15 ORF21216 - 2.7e-50 170.1 0.3 2e-49 167.3 0.1 2.4 3 0 0 3 3 3 1 Orn/Lys/Arg decarboxylase, C-terminal domain Nuc_sug_transp PF04142.15 ORF151691 - 5.7e-10 38.9 4.3 9.2e-10 38.2 4.3 1.3 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF151691 - 4e-06 27.0 27.0 7.8e-05 22.9 8.4 3.1 2 2 0 2 2 2 2 EamA-like transporter family CRT-like PF08627.10 ORF151691 - 0.002 17.1 10.1 0.002 17.1 10.1 2.5 2 1 1 3 3 3 2 CRT-like, chloroquine-resistance transporter-like PPTA PF01239.22 ORF14011 - 5.1e-05 22.9 0.7 0.00057 19.5 0.3 2.3 2 0 0 2 2 2 1 Protein prenyltransferase alpha subunit repeat LRR_4 PF12799.7 ORF14011 - 0.0022 18.4 0.0 1 9.9 0.0 3.1 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF14011 - 0.0044 16.7 0.4 0.026 14.3 0.2 2.5 2 1 0 2 2 2 1 Leucine rich repeat UNC45-central PF11701.8 ORF14011 - 0.15 12.0 0.1 0.24 11.3 0.1 1.2 1 0 0 1 1 1 0 Myosin-binding striated muscle assembly central GRDP-like PF07173.12 ORF131085 - 0.00087 20.0 11.4 0.0044 17.7 1.6 2.9 2 1 1 3 3 3 2 Glycine-rich domain-containing protein-like T3SS_needle_reg PF09025.10 ORF130038 - 0.099 12.6 0.0 11 5.9 0.0 2.3 2 0 0 2 2 2 0 YopR, type III needle-polymerisation regulator Renin_r PF07850.14 ORF120125 - 3.5 8.3 6.4 7 7.3 0.3 3.1 2 0 0 2 2 2 0 Renin receptor-like protein Stc1 PF12898.7 ORF119407 - 0.18 12.3 6.8 11 6.6 0.0 4.1 4 1 0 4 4 4 0 Stc1 domain DUF624 PF04854.14 ORF119407 - 2.7 8.2 18.2 13 6.0 0.1 5.7 4 3 3 7 7 7 0 Protein of unknown function, DUF624 Dynamin_M PF01031.20 ORF118661 - 0.00084 18.6 1.1 0.0015 17.9 1.1 1.3 1 0 0 1 1 1 1 Dynamin central region CLASP_N PF12348.8 ORF118661 - 0.015 14.9 0.1 0.026 14.1 0.1 1.3 1 0 0 1 1 1 0 CLASP N terminal Asp PF00026.23 ORF114728 - 2.4e-45 155.3 12.3 3.2e-45 154.9 12.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF114728 - 3.2e-06 27.5 9.5 0.00024 21.4 0.4 3.0 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF114728 - 0.0078 16.0 0.0 0.015 15.1 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 ORF114728 - 0.024 15.3 0.3 3.7 8.3 0.1 2.9 2 1 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 ORF114728 - 0.057 14.0 0.1 6 7.5 0.0 3.5 3 1 0 3 3 3 0 gag-polyprotein putative aspartyl protease DJ-1_PfpI PF01965.24 ORF108406 - 6.1e-36 123.7 0.0 1.5e-17 63.9 0.0 2.1 2 0 0 2 2 2 2 DJ-1/PfpI family GATase_3 PF07685.14 ORF108406 - 6e-05 22.7 0.0 0.12 11.9 0.0 2.2 2 0 0 2 2 2 2 CobB/CobQ-like glutamine amidotransferase domain GATase_5 PF13507.6 ORF108406 - 0.026 13.6 0.0 2.2 7.3 0.0 2.2 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain SNO PF01174.19 ORF108406 - 0.039 13.8 0.1 4 7.2 0.0 2.2 2 0 0 2 2 2 0 SNO glutamine amidotransferase family GATase PF00117.28 ORF108406 - 0.08 12.7 0.0 4.5 7.0 0.0 2.2 2 0 0 2 2 2 0 Glutamine amidotransferase class-I LRR_4 PF12799.7 ORF106066 - 1.3e-09 38.2 12.3 0.0023 18.3 0.3 6.7 6 2 0 6 6 6 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF106066 - 1.1e-07 31.5 14.5 2.9 7.7 0.1 7.9 6 3 1 7 7 7 4 Leucine rich repeat LRR_1 PF00560.33 ORF106066 - 3e-07 30.0 10.9 9 7.3 0.0 7.1 7 0 0 7 7 7 4 Leucine Rich Repeat LRR_6 PF13516.6 ORF106066 - 8.2e-07 28.6 14.5 0.57 10.4 0.0 7.7 8 0 0 8 8 8 2 Leucine Rich repeat zf-RING_2 PF13639.6 ORF105978 - 1.7e-11 44.3 8.2 1.7e-11 44.3 8.2 2.6 2 1 0 2 2 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF105978 - 2.5e-07 30.3 5.6 7.3e-07 28.8 5.6 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF105978 - 6.6e-06 26.3 4.7 6.6e-06 26.3 4.7 2.3 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF105978 - 3.3e-05 23.6 6.1 3.3e-05 23.6 6.1 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF105978 - 0.00028 20.7 4.4 0.00028 20.7 4.4 2.5 3 1 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF105978 - 0.0015 18.5 4.6 0.0015 18.5 4.6 2.1 2 0 0 2 2 1 1 RING-type zinc-finger TMEM52 PF14979.6 ORF105978 - 0.0015 18.4 0.2 0.0015 18.4 0.2 2.2 1 1 1 2 2 2 1 Transmembrane 52 zf-RING_5 PF14634.6 ORF105978 - 0.013 15.5 7.2 0.013 15.5 7.2 2.5 3 0 0 3 3 2 0 zinc-RING finger domain YfhO PF09586.10 ORF105978 - 0.041 12.1 3.9 0.069 11.4 3.9 1.3 1 0 0 1 1 1 0 Bacterial membrane protein YfhO NS3_envE PF02723.14 ORF105978 - 1.6 8.9 9.6 0.24 11.5 4.5 2.2 1 1 1 2 2 2 0 Non-structural protein NS3/Small envelope protein E RINGv PF12906.7 ORF105978 - 3 8.0 14.4 0.19 11.8 8.3 2.2 2 0 0 2 2 2 0 RING-variant domain Glyco_hydro_31 PF01055.26 NODE_12576_length_1246_cov_198.126342_g9401_i0reverse_frame_1 - 1.8e-57 195.5 2.0 2.6e-57 195.0 2.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 SIT PF15330.6 ORF91447 - 0.0024 18.3 2.5 0.84 10.1 0.4 2.7 2 0 0 2 2 2 2 SHP2-interacting transmembrane adaptor protein, SIT DUF3328 PF11807.8 ORF91447 - 0.033 14.0 3.1 1.8 8.3 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3328) G0-G1_switch_2 PF15103.6 ORF91447 - 0.19 12.2 0.5 0.53 10.7 0.5 1.8 1 1 0 1 1 1 0 G0/G1 switch protein 2 TMEM132D_C PF15706.5 ORF91447 - 1.2 9.0 6.4 16 5.4 0.2 2.7 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term XK-related PF09815.9 ORF91447 - 5.9 5.8 28.7 0.048 12.7 5.8 2.8 1 1 1 2 2 2 0 XK-related protein Glyco_hydro_2_C PF02836.17 ORF8454 - 0.024 13.8 2.1 0.018 14.1 0.6 1.6 2 0 0 2 2 2 0 Glycosyl hydrolases family 2, TIM barrel domain EF-hand_1 PF00036.32 ORF81090 - 2.2e-15 54.9 2.4 9.9e-08 31.0 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF81090 - 3.4e-13 49.8 1.0 3.4e-13 49.8 1.0 3.1 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF81090 - 5.8e-11 41.4 3.8 5.5e-05 22.8 0.5 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF81090 - 7.9e-09 34.6 4.2 0.0015 17.9 0.0 3.1 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF81090 - 4.5e-07 29.6 3.9 2.1e-06 27.5 0.0 3.0 2 1 1 3 3 3 2 EF-hand domain pair Dockerin_1 PF00404.18 ORF81090 - 0.001 19.2 0.0 0.0034 17.6 0.0 2.0 1 0 0 1 1 1 1 Dockerin type I domain EF-hand_9 PF14658.6 ORF81090 - 0.0015 18.8 0.1 0.0037 17.6 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain PNK3P PF08645.11 ORF80230 - 3.4e-57 192.7 0.5 3.4e-57 192.7 0.5 1.9 2 0 0 2 2 2 1 Polynucleotide kinase 3 phosphatase AAA_33 PF13671.6 ORF80230 - 3.2e-19 69.5 0.1 2.7e-16 60.0 0.0 2.8 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 ORF80230 - 3e-06 26.6 0.2 0.018 14.3 0.0 2.4 1 1 1 2 2 2 2 Zeta toxin ABC_tran PF00005.27 ORF80230 - 0.0033 17.9 0.0 0.0072 16.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF80230 - 0.004 16.9 0.0 0.19 11.5 0.0 2.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF80230 - 0.0092 16.1 0.9 0.092 12.8 0.1 2.8 2 2 0 2 2 2 1 50S ribosome-binding GTPase RNA_helicase PF00910.22 ORF80230 - 0.017 15.5 0.3 0.75 10.2 0.1 2.6 2 0 0 2 2 2 0 RNA helicase PGP_phosphatase PF09419.10 ORF80230 - 0.017 14.7 0.7 0.16 11.6 0.0 2.4 2 1 1 3 3 3 0 Mitochondrial PGP phosphatase AAA_25 PF13481.6 ORF80230 - 0.075 12.6 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain Ploopntkinase3 PF18751.1 ORF80230 - 0.081 12.8 0.0 0.22 11.4 0.0 1.8 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 RsgA_GTPase PF03193.16 ORF80230 - 0.13 12.2 0.1 0.6 10.0 0.0 2.0 2 1 0 2 2 2 0 RsgA GTPase GIT_CC PF16559.5 ORF77176 - 0.16 11.8 1.5 0.32 10.9 1.5 1.5 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor PV_NSP1 PF12433.8 ORF77176 - 0.91 9.9 5.1 0.49 10.8 0.9 2.4 2 0 0 2 2 2 0 Parvovirus non-structural protein 1 GIT_CC PF16559.5 ORF72968 - 0.16 11.8 1.5 0.32 10.9 1.5 1.5 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor PV_NSP1 PF12433.8 ORF72968 - 0.91 9.9 5.1 0.49 10.8 0.9 2.4 2 0 0 2 2 2 0 Parvovirus non-structural protein 1 MFS_1 PF07690.16 ORF6582 - 2.2e-24 86.0 60.2 1.2e-15 57.3 26.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF6582 - 2.2e-20 72.6 33.9 2.9e-20 72.2 33.9 1.0 1 0 0 1 1 1 1 Transmembrane secretion effector PTR2 PF00854.21 ORF6582 - 0.082 11.7 6.1 2.1 7.1 0.1 2.3 2 0 0 2 2 2 0 POT family Asp PF00026.23 ORF63654 - 9.9e-48 163.2 0.7 1.2e-47 162.9 0.7 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF63654 - 1.1e-10 42.1 0.3 0.00012 22.4 0.1 3.1 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 ORF63654 - 0.024 15.3 0.0 23 5.7 0.0 3.1 2 1 0 2 2 2 0 Aspartyl protease TBCC PF07986.12 ORF58321 - 1.7e-19 69.7 3.7 4.3e-19 68.4 3.7 1.7 1 0 0 1 1 1 1 Tubulin binding cofactor C CAP_C PF08603.11 ORF58321 - 0.00013 21.7 6.0 0.00021 20.9 4.5 2.1 2 0 0 2 2 2 1 Adenylate cyclase associated (CAP) C terminal MukB_hinge PF16330.5 ORF58321 - 0.087 12.5 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 MukB hinge domain DEAD PF00270.29 ORF55645 - 2.6e-42 144.6 0.1 4.7e-42 143.7 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF55645 - 7.1e-31 106.8 0.3 6.4e-30 103.8 0.1 2.4 3 0 0 3 3 3 1 Helicase conserved C-terminal domain tRNA-synt_1b PF00579.25 ORF55645 - 0.00026 20.4 0.0 0.00045 19.6 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) CMS1 PF14617.6 ORF55645 - 0.0042 16.5 0.0 0.012 15.0 0.0 1.7 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit VEG PF06257.11 ORF55645 - 0.11 12.5 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 Biofilm formation stimulator VEG EF-hand_6 PF13405.6 ORF43403 - 2.4e-20 70.7 3.2 4.1e-06 26.3 0.1 3.6 3 0 0 3 3 3 3 EF-hand domain EF-hand_1 PF00036.32 ORF43403 - 8.2e-20 68.8 0.8 1.7e-06 27.2 0.1 3.5 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF43403 - 5.3e-18 65.2 0.2 7.6e-12 45.5 0.0 2.9 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF43403 - 1.3e-12 46.5 2.2 1.6e-05 24.1 0.1 3.5 3 0 0 3 3 3 2 EF hand Exo_endo_phos PF03372.23 ORF43403 - 5.1e-12 45.8 0.2 2.7e-11 43.4 0.2 2.0 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family EF-hand_8 PF13833.6 ORF43403 - 6.3e-12 45.1 0.0 1.5e-05 24.8 0.0 3.6 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF43403 - 0.00035 20.8 0.0 0.33 11.3 0.0 3.1 2 1 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF43403 - 0.00082 19.3 0.3 1 9.4 0.0 3.9 4 0 0 4 4 4 1 Cytoskeletal-regulatory complex EF hand DEAD PF00270.29 ORF21552 - 1.1e-38 132.8 0.1 1.6e-38 132.2 0.1 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF21552 - 8.8e-30 103.3 0.4 5.2e-28 97.6 0.1 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain CMS1 PF14617.6 ORF21552 - 4.7e-05 22.9 0.0 8.3e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit Thioredoxin_6 PF13848.6 ORF21552 - 0.0028 17.6 0.2 0.0075 16.2 0.2 1.8 1 0 0 1 1 1 1 Thioredoxin-like domain GIT_CC PF16559.5 ORF151997 - 0.16 11.8 1.5 0.32 10.9 1.5 1.5 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor PV_NSP1 PF12433.8 ORF151997 - 0.91 9.9 5.1 0.49 10.8 0.9 2.4 2 0 0 2 2 2 0 Parvovirus non-structural protein 1 GAT PF03127.14 ORF151990 - 0.006 16.9 0.4 0.006 16.9 0.4 2.5 3 0 0 3 3 3 1 GAT domain DSX_dimer PF08828.10 ORF148783 - 0.12 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Doublesex dimerisation domain COX3 PF00510.18 ORF148271 - 8e-16 58.6 14.3 8e-16 58.6 14.3 1.5 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III Titin_Ig-rpts PF06582.12 ORF147142 - 0.72 9.8 4.5 1.6 8.7 0.1 2.7 2 0 0 2 2 2 0 Titin repeat Prominin PF05478.11 ORF147142 - 0.85 7.5 6.3 1.4 6.8 6.3 1.2 1 0 0 1 1 1 0 Prominin LCD1 PF09798.9 ORF147142 - 2.2 6.7 10.8 2.7 6.4 10.8 1.2 1 0 0 1 1 1 0 DNA damage checkpoint protein DUF4795 PF16043.5 ORF147142 - 6.9 6.2 27.4 0.58 9.7 13.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) DEAD PF00270.29 ORF142301 - 1.1e-38 132.8 0.1 1.6e-38 132.2 0.1 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF142301 - 8.8e-30 103.3 0.4 5.2e-28 97.6 0.1 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain CMS1 PF14617.6 ORF142301 - 4.7e-05 22.9 0.0 8.3e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit Thioredoxin_6 PF13848.6 ORF142301 - 0.0028 17.6 0.2 0.0075 16.2 0.2 1.8 1 0 0 1 1 1 1 Thioredoxin-like domain Ank_5 PF13857.6 ORF137479 - 6e-08 32.8 0.2 0.095 13.1 0.0 4.2 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF137479 - 3.2e-06 27.6 0.1 0.006 17.1 0.1 2.9 3 0 0 3 3 3 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF137479 - 8.4e-05 22.7 1.8 4.5 8.2 0.1 4.1 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF137479 - 0.0015 19.1 0.1 0.087 13.4 0.0 3.0 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF137479 - 0.016 15.6 0.9 21 5.7 0.2 4.0 4 0 0 4 4 4 0 Ankyrin repeat Iso_dh PF00180.20 ORF12835 - 7.9e-81 271.9 0.0 9.1e-81 271.7 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Stanniocalcin PF03298.13 ORF117305 - 0.074 12.4 4.1 0.074 12.4 1.3 2.0 2 0 0 2 2 2 0 Stanniocalcin family DUF1084 PF06454.11 ORF104414 - 0.18 11.1 0.0 0.26 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) Peptidase_C13 PF01650.18 ORF101261 - 1.9e-103 345.5 0.4 3.1e-103 344.8 0.4 1.3 1 0 0 1 1 1 1 Peptidase C13 family DUF4180 PF13788.6 ORF101261 - 0.11 12.4 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4180) CRISPR_Cse2 PF09485.10 ORF100887 - 0.052 14.1 0.1 11 6.5 0.0 2.3 2 0 0 2 2 2 0 CRISPR-associated protein Cse2 (CRISPR_cse2) SUB1_ProdP9 PF18213.1 NODE_12576_length_1246_cov_198.126342_g9401_i0reverse_frame_2 - 0.19 11.6 2.8 2.4 8.1 0.0 3.0 3 0 0 3 3 3 0 SUB1 protease Prodomain ProdP9 DUF3488 PF11992.8 NODE_12576_length_1246_cov_198.126342_g9401_i0forward_frame_2 - 0.1 11.5 4.6 0.19 10.6 4.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DsbD PF02683.15 ORF9598 - 0.082 12.8 2.0 0.16 11.8 0.6 2.1 2 1 0 2 2 2 0 Cytochrome C biogenesis protein transmembrane region HET PF06985.11 ORF9598 - 0.19 12.0 0.2 0.42 11.0 0.1 1.5 1 1 0 1 1 1 0 Heterokaryon incompatibility protein (HET) Glt_symporter PF03616.14 ORF93564 - 2.7e-164 546.3 24.6 2.7e-164 546.3 24.6 1.3 2 0 0 2 2 2 1 Sodium/glutamate symporter Cation_efflux PF01545.21 ORF91131 - 3.9e-46 157.3 9.7 5.8e-46 156.7 9.7 1.3 1 1 0 1 1 1 1 Cation efflux family Rhamnogal_lyase PF06045.11 ORF90278 - 0.12 11.8 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 Rhamnogalacturonate lyase family Na_Pi_cotrans PF02690.15 ORF90278 - 6.5 6.9 7.8 0.52 10.4 0.3 2.5 2 1 0 2 2 2 0 Na+/Pi-cotransporter DUF4131 PF13567.6 ORF90278 - 7.7 6.1 8.3 6.3 6.4 0.1 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) Ank_2 PF12796.7 ORF8883 - 1.7e-14 54.2 0.4 7.9e-08 32.8 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF8883 - 1.5e-10 40.3 0.2 0.13 12.9 0.0 4.0 4 0 0 4 4 4 3 Ankyrin repeat Ank_4 PF13637.6 ORF8883 - 1.8e-10 41.1 0.0 0.00029 21.3 0.0 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) LRR_8 PF13855.6 ORF8883 - 7.3e-09 35.3 9.3 4.6e-06 26.3 0.8 3.5 2 1 1 3 3 3 2 Leucine rich repeat LRR_4 PF12799.7 ORF8883 - 1.2e-06 28.7 18.8 0.013 15.9 0.1 4.2 1 1 4 5 5 5 5 Leucine Rich repeats (2 copies) Ank PF00023.30 ORF8883 - 4e-06 27.0 0.1 2.4 8.7 0.0 3.8 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF8883 - 6.7e-06 26.3 0.0 0.14 12.5 0.0 2.8 2 0 0 2 2 2 2 Ankyrin repeats (many copies) LRR_1 PF00560.33 ORF8883 - 3.8 8.4 21.0 6.8 7.7 0.5 6.1 5 1 0 5 5 5 0 Leucine Rich Repeat TrwB_AAD_bind PF10412.9 ORF83401 - 0.14 11.0 0.1 0.23 10.3 0.1 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Nuf2 PF03800.14 ORF82416 - 3e-14 53.3 0.1 8.6e-14 51.8 0.1 1.9 1 0 0 1 1 1 1 Nuf2 family Golgin_A5 PF09787.9 ORF82416 - 2.4e-05 24.0 45.3 0.00017 21.2 17.9 2.1 1 1 1 2 2 2 2 Golgin subfamily A member 5 ZapB PF06005.12 ORF82416 - 0.0083 16.6 9.6 0.0083 16.6 9.6 5.4 2 1 2 4 4 4 1 Cell division protein ZapB HMMR_N PF15905.5 ORF82416 - 0.69 9.3 39.9 0.048 13.1 17.6 2.7 1 1 2 3 3 3 0 Hyaluronan mediated motility receptor N-terminal DUF812 PF05667.11 ORF82416 - 2.2 7.0 39.0 0.63 8.8 15.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Baculo_PEP_C PF04513.12 ORF82416 - 3.5 7.7 11.3 0.38 10.8 0.2 3.3 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 ORF82416 - 3.9 7.5 24.0 1.1 9.3 0.6 4.0 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Seryl_tRNA_N PF02403.22 ORF82416 - 7.5 6.8 41.0 5.2 7.3 6.2 4.6 1 1 4 5 5 5 0 Seryl-tRNA synthetase N-terminal domain TPR_MLP1_2 PF07926.12 ORF82416 - 7.6 6.6 58.3 3.3 7.8 16.8 4.0 1 1 3 4 4 4 0 TPR/MLP1/MLP2-like protein CALCOCO1 PF07888.11 ORF82416 - 7.9 5.2 51.2 17 4.1 50.7 1.5 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like Spc7 PF08317.11 ORF82416 - 9.5 5.0 48.1 0.77 8.6 19.1 3.0 1 1 2 3 3 3 0 Spc7 kinetochore protein Pkinase PF00069.25 ORF77791 - 1.8e-70 237.3 0.6 2.4e-70 236.9 0.6 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF77791 - 5.4e-37 127.5 0.0 7.4e-37 127.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF77791 - 1.8e-10 40.6 0.0 8.6e-07 28.5 0.0 2.3 2 0 0 2 2 2 2 Kinase-like Pkinase_fungal PF17667.1 ORF77791 - 0.006 15.4 0.3 0.017 13.9 0.1 1.7 2 0 0 2 2 2 1 Fungal protein kinase Glyco_transf_34 PF05637.12 ORF75809 - 3.6e-15 56.3 0.3 5.1e-10 39.5 0.0 2.4 1 1 1 2 2 2 2 galactosyl transferase GMA12/MNN10 family SAC3 PF12209.8 ORF70952 - 0.047 13.9 1.0 5.9 7.1 0.0 3.2 2 2 1 3 3 3 0 Leucine permease transcriptional regulator helical domain Nucleoside_tran PF01733.18 ORF5021 - 8e-29 101.0 14.2 4.9e-28 98.4 14.2 2.0 1 1 0 1 1 1 1 Nucleoside transporter MbeD_MobD PF04899.12 ORF46648 - 0.023 14.8 2.7 0.031 14.4 0.2 2.5 2 1 0 2 2 2 0 MbeD/MobD like SlyX PF04102.12 ORF46648 - 0.11 13.2 0.4 0.11 13.2 0.4 5.6 4 1 1 5 5 5 0 SlyX Nop52 PF05997.12 ORF45290 - 5.4e-38 130.9 0.2 9.1e-38 130.2 0.2 1.4 1 0 0 1 1 1 1 Nucleolar protein,Nop52 TERB2 PF15101.6 ORF45290 - 2 8.4 5.9 2.5 8.1 5.0 1.5 1 1 0 1 1 1 0 Telomere-associated protein TERB2 Chloroa_b-bind PF00504.21 ORF37144 - 3.3e-71 239.0 4.9 1.3e-34 120.0 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF37144 - 0.004 17.4 0.0 8.1 6.7 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF37144 - 0.0061 16.9 0.0 6.8 7.2 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF37144 - 0.014 15.5 0.0 9 6.4 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF37144 - 0.044 13.8 0.0 12 5.8 0.0 2.2 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal FA_desaturase PF00487.24 ORF2026 - 3.4e-23 82.8 2.4 3.4e-23 82.8 2.4 2.3 1 1 0 2 2 2 1 Fatty acid desaturase DUF5392 PF17370.2 ORF2026 - 0.024 14.7 0.2 0.26 11.4 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5392) Cation_ATPase_C PF00689.21 ORF2026 - 0.21 11.3 6.2 0.36 10.5 0.7 2.7 2 1 0 2 2 2 0 Cation transporting ATPase, C-terminus AgrB PF04647.15 ORF2026 - 0.73 9.1 11.7 2.4 7.4 3.2 3.0 3 0 0 3 3 3 0 Accessory gene regulator B DUF4483 PF14825.6 ORF18702 - 0.004 16.9 0.7 6.5 6.5 0.1 3.3 3 0 0 3 3 3 3 Domain of unknown function (DUF4483) FA_desaturase PF00487.24 ORF17108 - 7e-21 75.2 3.6 7e-21 75.2 3.6 2.4 3 0 0 3 3 3 2 Fatty acid desaturase Pex24p PF06398.11 ORF17108 - 4.4 6.2 8.2 0.69 8.8 2.9 2.1 2 0 0 2 2 2 0 Integral peroxisomal membrane peroxin MFS_1 PF07690.16 ORF148434 - 8.4e-20 71.0 28.7 1.1e-11 44.3 16.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily EMC3_TMCO1 PF01956.16 ORF148434 - 0.097 12.4 2.9 0.25 11.0 2.8 1.8 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DEAD PF00270.29 ORF148346 - 1.9e-40 138.5 0.3 3.1e-40 137.8 0.3 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF148346 - 2.4e-29 101.9 0.5 1.2e-28 99.7 0.1 2.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain CMS1 PF14617.6 ORF148346 - 3.5e-05 23.3 0.1 8e-05 22.1 0.1 1.6 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit TniB PF05621.11 ORF148346 - 0.0011 18.4 0.1 0.0022 17.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial TniB protein Helicase_RecD PF05127.14 ORF148346 - 0.0035 17.2 0.0 0.0059 16.5 0.0 1.3 1 0 0 1 1 1 1 Helicase AAA_30 PF13604.6 ORF148346 - 0.013 15.2 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain tRNA-synt_1b PF00579.25 ORF148346 - 0.024 13.9 0.0 0.042 13.2 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) AAA_19 PF13245.6 ORF148346 - 0.11 12.9 0.4 0.26 11.6 0.4 1.7 1 1 0 1 1 1 0 AAA domain MotB_plug PF13677.6 ORF137753 - 2e-19 68.9 0.3 3.6e-19 68.1 0.3 1.4 1 0 0 1 1 1 1 Membrane MotB of proton-channel complex MotA/MotB OmpA PF00691.20 ORF137753 - 2.2e-12 47.2 0.0 3.9e-12 46.4 0.0 1.4 1 0 0 1 1 1 1 OmpA family GTP_cyclohydro2 PF00925.20 ORF135496 - 8.5e-19 67.7 0.0 1.3e-18 67.2 0.0 1.3 1 0 0 1 1 1 1 GTP cyclohydrolase II GTP_CH_N PF12471.8 ORF135496 - 2.3e-12 47.1 0.1 9.5e-12 45.1 0.1 2.0 1 1 0 1 1 1 1 GTP cyclohydrolase N terminal DUF5608 PF18356.1 ORF135496 - 0.063 13.3 0.1 1.7 8.7 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5608) DUF3450 PF11932.8 ORF135297 - 0.0092 15.3 13.4 0.07 12.4 2.9 2.8 2 1 1 3 3 3 2 Protein of unknown function (DUF3450) C_Hendra PF16821.5 ORF135297 - 0.02 14.7 2.1 0.052 13.4 2.1 1.7 1 0 0 1 1 1 0 C protein from hendra and measles viruses DNase-RNase PF02577.14 ORF135297 - 0.039 13.6 0.0 0.071 12.8 0.0 1.4 1 0 0 1 1 1 0 Bifunctional nuclease TMF_DNA_bd PF12329.8 ORF135297 - 0.048 13.7 0.6 0.048 13.7 0.6 3.9 3 2 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Prefoldin_2 PF01920.20 ORF135297 - 0.065 13.2 22.7 1.2 9.1 1.1 3.5 3 0 0 3 3 3 0 Prefoldin subunit OmpH PF03938.14 ORF135297 - 0.091 13.1 16.3 0.43 10.9 9.3 2.4 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF135297 - 0.16 11.3 6.3 0.28 10.5 2.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) T3SSipB PF16535.5 ORF135297 - 0.27 11.7 4.0 0.17 12.4 0.8 2.1 2 0 0 2 2 2 0 Type III cell invasion protein SipB FliJ PF02050.16 ORF135297 - 0.31 11.3 13.2 7.4 6.8 9.1 2.7 2 1 0 2 2 2 0 Flagellar FliJ protein DivIC PF04977.15 ORF135297 - 0.5 10.2 0.1 0.5 10.2 0.1 3.7 2 1 0 3 3 3 0 Septum formation initiator TMPIT PF07851.13 ORF135297 - 0.69 9.1 13.2 0.13 11.5 7.8 2.1 2 0 0 2 2 2 0 TMPIT-like protein DUF2203 PF09969.9 ORF135297 - 1.1 9.9 8.4 1.2 9.8 3.1 2.7 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF135297 - 1.7 7.7 14.5 0.16 11.1 9.6 1.7 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_MT_bd PF06657.13 ORF135297 - 2.9 8.4 13.7 0.26 11.8 2.3 3.6 3 1 1 4 4 3 0 Centrosome microtubule-binding domain of Cep57 Syntaxin-6_N PF09177.11 ORF135297 - 6 7.5 13.7 1.2 9.8 6.5 2.9 2 1 1 3 3 3 0 Syntaxin 6, N-terminal UPF0242 PF06785.11 ORF135297 - 8.4 6.4 16.4 16 5.5 9.6 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus ISG65-75 PF11727.8 ORF135297 - 9.4 5.4 13.0 2.1 7.5 6.8 2.3 2 0 0 2 2 2 0 Invariant surface glycoprotein DUF3450 PF11932.8 ORF131742 - 0.0092 15.3 13.4 0.07 12.4 2.9 2.8 2 1 1 3 3 3 2 Protein of unknown function (DUF3450) C_Hendra PF16821.5 ORF131742 - 0.02 14.7 2.1 0.052 13.4 2.1 1.7 1 0 0 1 1 1 0 C protein from hendra and measles viruses DNase-RNase PF02577.14 ORF131742 - 0.039 13.6 0.0 0.071 12.8 0.0 1.4 1 0 0 1 1 1 0 Bifunctional nuclease TMF_DNA_bd PF12329.8 ORF131742 - 0.048 13.7 0.6 0.048 13.7 0.6 3.9 3 2 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Prefoldin_2 PF01920.20 ORF131742 - 0.065 13.2 22.7 1.2 9.1 1.1 3.5 3 0 0 3 3 3 0 Prefoldin subunit OmpH PF03938.14 ORF131742 - 0.091 13.1 16.3 0.43 10.9 9.3 2.4 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF131742 - 0.16 11.3 6.3 0.28 10.5 2.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) T3SSipB PF16535.5 ORF131742 - 0.27 11.7 4.0 0.17 12.4 0.8 2.1 2 0 0 2 2 2 0 Type III cell invasion protein SipB FliJ PF02050.16 ORF131742 - 0.31 11.3 13.2 7.4 6.8 9.1 2.7 2 1 0 2 2 2 0 Flagellar FliJ protein DivIC PF04977.15 ORF131742 - 0.5 10.2 0.1 0.5 10.2 0.1 3.7 2 1 0 3 3 3 0 Septum formation initiator TMPIT PF07851.13 ORF131742 - 0.69 9.1 13.2 0.13 11.5 7.8 2.1 2 0 0 2 2 2 0 TMPIT-like protein DUF2203 PF09969.9 ORF131742 - 1.1 9.9 8.4 1.2 9.8 3.1 2.7 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF131742 - 1.7 7.7 14.5 0.16 11.1 9.6 1.7 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_MT_bd PF06657.13 ORF131742 - 2.9 8.4 13.7 0.26 11.8 2.3 3.6 3 1 1 4 4 3 0 Centrosome microtubule-binding domain of Cep57 Syntaxin-6_N PF09177.11 ORF131742 - 5.9 7.5 13.7 1.2 9.8 6.5 3.0 2 1 1 3 3 3 0 Syntaxin 6, N-terminal UPF0242 PF06785.11 ORF131742 - 8.4 6.4 16.4 16 5.5 9.6 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus ISG65-75 PF11727.8 ORF131742 - 9.4 5.4 13.0 2.1 7.5 6.8 2.3 2 0 0 2 2 2 0 Invariant surface glycoprotein Rhamnogal_lyase PF06045.11 ORF11953 - 0.12 11.8 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 Rhamnogalacturonate lyase family Na_Pi_cotrans PF02690.15 ORF11953 - 6.5 6.9 7.8 0.52 10.4 0.3 2.5 2 1 0 2 2 2 0 Na+/Pi-cotransporter DUF4131 PF13567.6 ORF11953 - 7.6 6.1 8.3 6.3 6.4 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) GBP_repeat PF02526.14 ORF118729 - 0.23 11.2 2.9 3.2 7.5 0.1 2.6 2 0 0 2 2 2 0 Glycophorin-binding protein UPF0154 PF03672.13 ORF118729 - 0.52 10.4 1.8 0.8 9.8 0.2 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) SKG6 PF08693.10 ORF117670 - 1.5 8.3 5.4 0.22 11.0 0.4 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Pkinase PF00069.25 ORF115372 - 2e-62 211.0 0.1 2.6e-62 210.6 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF115372 - 2.5e-36 125.3 0.0 3.2e-36 125.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF115372 - 8.2e-05 22.3 0.4 0.18 11.4 0.1 2.5 3 0 0 3 3 3 2 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF115372 - 0.00051 19.4 0.0 0.002 17.5 0.0 1.8 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF115372 - 0.041 12.7 0.0 0.072 11.9 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase DUF2838 PF10998.8 ORF115372 - 0.099 12.9 0.1 0.18 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) APH PF01636.23 ORF115372 - 0.14 12.0 0.0 2.5 7.9 0.0 2.0 2 0 0 2 2 2 0 Phosphotransferase enzyme family PfkB PF00294.24 ORF111538 - 4.1e-62 210.2 0.0 5.5e-62 209.8 0.0 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase DUF4472 PF14739.6 ORF103420 - 0.00065 20.4 17.5 0.00065 20.4 17.5 5.2 2 2 3 5 5 5 1 Domain of unknown function (DUF4472) DUF5053 PF16476.5 ORF103420 - 8.4 6.1 7.2 5.1 6.8 0.1 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF5053) TRP PF06011.12 ORF100062 - 0.013 14.2 13.9 0.075 11.8 1.7 2.3 2 1 0 2 2 2 0 Transient receptor potential (TRP) ion channel Vpu PF00558.19 ORF100062 - 0.016 14.9 3.7 7 6.5 0.0 3.9 4 0 0 4 4 4 0 Vpu protein UPF0542 PF15086.6 ORF100062 - 0.019 14.9 0.2 0.019 14.9 0.2 3.6 3 1 2 5 5 5 0 Uncharacterised protein family UPF0542 DUF2339 PF10101.9 ORF100062 - 0.029 13.0 1.0 0.27 9.8 0.1 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2339) Shisa PF13908.6 ORF100062 - 0.045 14.0 0.5 4.2 7.6 0.2 2.6 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator Herpes_gE PF02480.16 ORF100062 - 0.062 12.0 0.0 5.7 5.6 0.0 2.5 3 0 0 3 3 3 0 Alphaherpesvirus glycoprotein E Endomucin PF07010.12 ORF100062 - 0.14 12.1 0.1 0.33 10.9 0.1 1.5 1 0 0 1 1 1 0 Endomucin ECSCR PF15820.5 ORF100062 - 0.24 11.2 0.0 0.24 11.2 0.0 2.7 3 0 0 3 3 3 0 Endothelial cell-specific chemotaxis regulator PMT_2 PF13231.6 ORF100062 - 0.49 10.6 18.2 0.053 13.7 2.3 3.2 3 1 1 4 4 4 0 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF4834 PF16118.5 ORF100062 - 0.62 11.1 13.0 5.6 8.0 0.1 4.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4834) FeoB_associated PF12669.7 ORF100062 - 1.5 9.3 6.7 4.6 7.7 0.1 3.8 4 0 0 4 4 4 0 FeoB-associated Cys-rich membrane protein LapA_dom PF06305.11 ORF100062 - 2.2 8.2 9.0 0.6 10.0 0.2 3.5 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain COX1 PF00115.20 ORF100062 - 5.9 5.6 9.6 9.2 5.0 0.2 2.4 2 1 0 2 2 2 0 Cytochrome C and Quinol oxidase polypeptide I DUF4064 PF13273.6 ORF100062 - 6.4 7.1 21.7 18 5.6 5.8 4.0 2 2 1 3 3 3 0 Protein of unknown function (DUF4064) DUF2663 PF10864.8 ORF100062 - 9.8 6.6 11.9 9.4 6.7 0.4 3.8 3 2 2 5 5 5 0 Protein of unknown function (DUF2663) PP-binding PF00550.25 ORF93763 - 1.2e-14 54.4 0.1 3e-14 53.1 0.1 1.7 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_12 PF13424.6 ORF93763 - 3.5e-09 36.8 33.2 0.00012 22.3 9.2 4.1 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF93763 - 0.00016 21.2 21.0 0.00061 19.3 9.6 2.3 1 1 1 2 2 2 2 MalT-like TPR region TPR_1 PF00515.28 ORF93763 - 0.00078 19.2 7.7 0.36 10.7 0.9 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF93763 - 0.031 14.5 12.1 0.3 11.4 0.4 5.2 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF93763 - 0.061 13.5 24.7 0.48 10.7 0.2 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat Flavodoxin_4 PF12682.7 ORF93763 - 0.25 11.1 0.2 1.2 8.9 0.0 2.0 2 0 0 2 2 2 0 Flavodoxin Hypoth_Ymh PF09509.10 ORF93763 - 1 9.3 4.1 0.67 9.9 0.8 2.3 3 0 0 3 3 3 0 Protein of unknown function (Hypoth_ymh) ANAPC5 PF12862.7 ORF93763 - 2.1 8.4 5.5 3.7 7.7 0.2 3.0 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 5 rve PF00665.26 ORF85693 - 8.3e-12 45.3 0.0 2.4e-11 43.9 0.0 1.9 1 0 0 1 1 1 1 Integrase core domain Peptidase_M20 PF01546.28 ORF82945 - 6.4e-23 81.5 0.0 9e-23 81.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF82945 - 3e-11 43.2 0.0 7.6e-11 41.9 0.0 1.7 1 0 0 1 1 1 1 Peptidase dimerisation domain Mistic PF11458.8 ORF82945 - 0.043 13.8 0.0 0.17 11.8 0.0 2.0 1 0 0 1 1 1 0 Membrane-integrating protein Mistic Importin_rep_4 PF18808.1 ORF48460 - 0.00057 20.1 1.3 0.0015 18.8 0.4 2.2 2 0 0 2 2 2 1 Importin repeat UME PF08064.13 ORF48460 - 0.0067 16.3 0.5 0.12 12.3 0.1 2.9 2 2 1 3 3 3 1 UME (NUC010) domain SapB_2 PF03489.17 ORF48460 - 0.022 14.9 0.6 2.5 8.3 0.2 3.8 3 0 0 3 3 3 0 Saposin-like type B, region 2 CLASP_N PF12348.8 ORF48460 - 0.023 14.3 0.5 6.3 6.3 0.0 3.5 2 2 1 3 3 3 0 CLASP N terminal HEAT_EZ PF13513.6 ORF48460 - 0.056 14.0 0.0 4.9 7.8 0.0 3.6 4 0 0 4 4 4 0 HEAT-like repeat HEAT PF02985.22 ORF48460 - 0.062 13.6 0.2 0.79 10.1 0.0 3.1 3 0 0 3 3 3 0 HEAT repeat TIP120 PF08623.10 ORF48460 - 0.069 12.9 0.2 1.9 8.2 0.2 2.8 1 1 0 1 1 1 0 TATA-binding protein interacting (TIP20) PPR_2 PF13041.6 ORF41403 - 2e-27 95.1 0.0 2.5e-06 27.6 0.0 8.1 3 3 6 9 9 9 8 PPR repeat family PPR_3 PF13812.6 ORF41403 - 6.6e-19 67.7 0.0 0.0021 18.1 0.0 5.8 5 1 0 5 5 5 5 Pentatricopeptide repeat domain PPR PF01535.20 ORF41403 - 3.4e-12 45.7 7.6 0.16 12.3 0.2 8.6 9 1 0 9 9 9 4 PPR repeat PPR_1 PF12854.7 ORF41403 - 1.2e-09 37.7 0.1 0.75 9.6 0.0 6.4 6 1 0 6 6 6 2 PPR repeat PPR_long PF17177.4 ORF41403 - 0.00042 19.8 0.7 0.032 13.6 0.1 3.1 1 1 2 3 3 3 1 Pentacotripeptide-repeat region of PRORP N36 PF11438.8 ORF41403 - 0.76 9.6 4.8 13 5.7 0.1 4.0 4 0 0 4 4 4 0 36-mer N-terminal peptide of the N protein (N36) HlyD PF00529.20 ORF39803 - 2.7e-13 49.6 0.0 5.4e-13 48.6 0.0 1.5 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS HlyD_D23 PF16576.5 ORF39803 - 2.3e-11 43.3 1.2 2.6e-09 36.6 0.1 2.3 2 0 0 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 ORF39803 - 5e-09 35.8 5.4 2e-07 30.7 0.2 3.6 4 0 0 4 4 4 2 Biotin-lipoyl like HlyD_3 PF13437.6 ORF39803 - 3e-07 31.1 0.9 0.00014 22.5 0.1 2.6 2 2 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl PF00364.22 ORF39803 - 0.009 15.8 0.2 1.4 8.8 0.2 2.6 2 0 0 2 2 2 1 Biotin-requiring enzyme DUF4386 PF14329.6 ORF39803 - 0.015 15.2 0.2 0.03 14.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4386) Leu_zip PF15294.6 ORF39803 - 0.28 10.6 3.8 0.4 10.2 3.8 1.1 1 0 0 1 1 1 0 Leucine zipper TolA_bind_tri PF16331.5 ORF39803 - 0.71 10.0 6.0 0.91 9.6 0.9 2.3 2 0 0 2 2 2 0 TolA binding protein trimerisation DUF2721 PF11026.8 ORF39803 - 2.9 7.8 5.0 0.66 9.9 1.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) zf-C2H2_6 PF13912.6 ORF38857 - 0.0013 18.7 0.9 0.0041 17.1 0.9 1.9 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_4 PF13894.6 ORF38857 - 0.024 15.5 1.4 0.087 13.7 1.4 2.1 1 0 0 1 1 1 0 C2H2-type zinc finger AT_hook PF02178.19 ORF38857 - 0.18 11.8 5.8 0.46 10.5 5.8 1.7 1 0 0 1 1 1 0 AT hook motif DinB_2 PF12867.7 ORF38727 - 0.00062 20.3 0.3 0.0048 17.4 0.1 2.3 2 1 0 2 2 2 1 DinB superfamily Methyltransf_24 PF13578.6 ORF38727 - 0.0011 19.9 0.0 0.0036 18.3 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain ketoacyl-synt PF00109.26 ORF31592 - 1.4e-39 136.2 2.4 2.2e-39 135.6 2.4 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 ORF31592 - 2.9e-30 104.7 0.9 1.1e-29 102.8 0.5 2.2 2 0 0 2 2 2 1 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 ORF31592 - 0.00041 19.8 0.1 0.00075 18.9 0.1 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain KAsynt_C_assoc PF16197.5 ORF31592 - 0.00059 20.3 0.0 0.001 19.5 0.0 1.4 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension KH_1 PF00013.29 ORF2913 - 1.1e-15 57.2 4.2 1.1e-08 34.8 0.6 2.7 3 0 0 3 3 3 2 KH domain HisKA PF00512.25 ORF23287 - 0.0026 17.8 0.0 0.0052 16.8 0.0 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain FtsL PF04999.13 ORF23287 - 0.021 14.8 0.3 0.12 12.4 0.0 2.3 2 0 0 2 2 2 0 Cell division protein FtsL UL41A PF17591.2 ORF21856 - 0.078 13.1 0.6 0.25 11.5 0.6 1.8 1 0 0 1 1 1 0 Herpesvirus UL41A MMR_HSR1 PF01926.23 ORF17460 - 9.4e-17 61.1 0.0 1.9e-16 60.2 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 ORF17460 - 4.5e-07 30.1 0.1 9.7e-07 29.0 0.1 1.6 1 1 0 1 1 1 1 Dynamin family FeoB_N PF02421.18 ORF17460 - 1.1e-05 25.0 1.0 0.0019 17.8 0.0 2.5 2 0 0 2 2 2 2 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF17460 - 0.00051 20.0 0.0 1.2 9.1 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 ORF17460 - 0.028 14.0 0.0 1.7 8.1 0.0 2.3 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain FtsK_SpoIIIE PF01580.18 ORF17460 - 0.034 13.5 0.1 0.065 12.6 0.1 1.6 1 1 0 1 1 1 0 FtsK/SpoIIIE family Arf PF00025.21 ORF17460 - 0.069 12.6 1.5 1.8 8.0 0.0 3.2 4 0 0 4 4 4 0 ADP-ribosylation factor family TctC PF03401.14 ORF17460 - 0.16 11.0 0.4 0.44 9.6 0.1 1.8 2 0 0 2 2 2 0 Tripartite tricarboxylate transporter family receptor Stealth_CR1 PF17101.5 ORF17460 - 0.2 11.4 1.2 0.62 9.9 1.2 1.8 1 0 0 1 1 1 0 Stealth protein CR1, conserved region 1 UL41A PF17591.2 ORF145299 - 0.078 13.1 0.6 0.25 11.5 0.6 1.8 1 0 0 1 1 1 0 Herpesvirus UL41A KH_1 PF00013.29 ORF14307 - 1.1e-15 57.2 4.2 1.1e-08 34.8 0.6 2.7 3 0 0 3 3 3 2 KH domain LRR_6 PF13516.6 ORF140912 - 3.1e-09 36.1 6.4 0.0028 17.6 0.1 4.5 4 0 0 4 4 4 3 Leucine Rich repeat LRR_1 PF00560.33 ORF140912 - 0.009 16.4 7.9 1.8 9.4 0.6 4.9 5 1 0 5 5 5 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF140912 - 0.14 12.6 5.7 0.34 11.4 0.4 3.1 2 1 2 4 4 4 0 Leucine Rich repeats (2 copies) KH_1 PF00013.29 ORF132212 - 1.1e-15 57.2 4.2 1.1e-08 34.8 0.6 2.7 3 0 0 3 3 3 2 KH domain DUF4407 PF14362.6 ORF126163 - 0.22 10.8 11.9 1.1 8.5 11.9 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Jnk-SapK_ap_N PF09744.9 ORF126163 - 0.7 10.1 20.4 0.087 13.0 1.7 3.0 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 HDV_ag PF01517.18 ORF126163 - 1.3 8.7 6.5 0.098 12.4 0.3 2.2 2 1 1 3 3 3 0 Hepatitis delta virus delta antigen ABC2_membrane_3 PF12698.7 ORF126163 - 1.6 7.8 3.3 2.4 7.2 3.3 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein PKcGMP_CC PF16808.5 ORF126163 - 2.4 8.1 9.7 14 5.6 2.1 3.7 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_TATA_bd PF12325.8 ORF126163 - 2.5 8.3 22.2 0.66 10.2 2.7 3.5 4 0 0 4 4 4 0 TATA element modulatory factor 1 TATA binding XH PF03469.14 ORF126163 - 7.7 6.4 11.1 0.1 12.5 2.1 2.5 3 0 0 3 3 3 0 XH domain P4Ha_N PF08336.11 ORF126163 - 9.2 6.3 13.4 8.9 6.3 7.2 3.0 2 1 1 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Csm1_N PF18504.1 ORF126163 - 9.5 6.6 21.9 2.1 8.8 1.7 3.6 3 0 0 3 3 3 0 Csm1 N-terminal domain zf-C3HC4_3 PF13920.6 ORF1250 - 1.5e-14 53.6 10.9 3.1e-14 52.6 10.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF1250 - 8.7e-10 38.3 11.1 2.2e-09 37.1 11.1 1.7 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF1250 - 3.2e-06 27.4 11.5 6.7e-06 26.3 11.5 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF1250 - 6.4e-06 25.9 13.4 1.7e-05 24.6 13.4 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF1250 - 0.00091 19.0 12.8 0.0018 18.1 12.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) VERL PF11386.8 ORF1250 - 0.0046 17.1 0.1 0.01 16.0 0.1 1.5 1 0 0 1 1 1 1 Vitelline envelope receptor for lysin Peptidase_C62 PF12380.8 ORF1250 - 0.0049 16.0 0.1 0.0079 15.3 0.1 1.2 1 0 0 1 1 1 1 Gill-associated viral 3C-like peptidase zf-RING_5 PF14634.6 ORF1250 - 0.012 15.6 11.0 0.027 14.4 11.0 1.6 1 0 0 1 1 1 0 zinc-RING finger domain DUF4980 PF16352.5 ORF1250 - 0.047 13.7 0.9 0.25 11.3 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4980) zf-RING_UBOX PF13445.6 ORF1250 - 0.75 9.9 8.1 0.95 9.5 5.0 2.5 1 1 1 2 2 2 0 RING-type zinc-finger zf-RING_4 PF14570.6 ORF1250 - 1.8 8.4 11.4 14 5.6 11.4 2.5 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Serinc PF03348.15 ORF124905 - 1.1e-74 251.9 21.2 1.3e-74 251.7 21.2 1.0 1 0 0 1 1 1 1 Serine incorporator (Serinc) TIM21 PF08294.11 ORF124905 - 0.023 14.6 0.0 0.099 12.5 0.0 2.1 1 0 0 1 1 1 0 TIM21 DUF3333 PF11812.8 ORF124905 - 0.19 11.9 1.4 0.5 10.6 1.4 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) OAD_gamma PF04277.13 ORF124905 - 6.6 7.4 0.0 6.6 7.4 0.0 4.4 4 0 0 4 4 4 0 Oxaloacetate decarboxylase, gamma chain Methyltransf_4 PF02390.17 ORF122106 - 0.075 12.5 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_25 PF13649.6 ORF122106 - 0.081 13.6 0.0 0.17 12.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Pkinase PF00069.25 ORF119636 - 2.1e-67 227.2 0.0 2.6e-67 227.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF119636 - 2.4e-30 105.7 0.0 1.6e-29 103.0 0.0 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF119636 - 1.6e-05 24.4 0.0 3.2e-05 23.4 0.0 1.6 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF119636 - 0.0027 17.1 0.2 0.0048 16.3 0.2 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF119636 - 0.005 16.5 0.4 0.06 13.0 0.0 2.4 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Pox_ser-thr_kin PF05445.11 ORF119636 - 0.027 13.4 0.1 0.049 12.6 0.1 1.3 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF119636 - 0.12 11.1 0.1 0.21 10.3 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase CCDC92 PF14916.6 ORF118793 - 0.081 12.7 1.5 0.082 12.7 0.1 1.7 2 0 0 2 2 2 0 Coiled-coil domain of unknown function Pkinase PF00069.25 ORF114628 - 1.7e-67 227.6 0.0 2.1e-67 227.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF114628 - 5e-30 104.6 0.0 3.3e-29 101.9 0.0 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF114628 - 2.2e-05 24.0 0.0 3.8e-05 23.2 0.0 1.6 1 1 1 2 2 2 1 Kinase-like FTA2 PF13095.6 ORF114628 - 0.0024 17.5 0.5 0.03 14.0 0.1 2.4 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 ORF114628 - 0.0025 17.2 0.2 0.0045 16.4 0.2 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pox_ser-thr_kin PF05445.11 ORF114628 - 0.029 13.3 0.1 0.053 12.5 0.1 1.3 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF114628 - 0.12 11.2 0.1 0.19 10.4 0.1 1.3 1 0 0 1 1 1 0 Fungal protein kinase SDF PF00375.18 ORF10746 - 3.9e-63 213.8 34.0 4.8e-63 213.5 34.0 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family ACOX PF01756.19 ORF104347 - 3.7e-18 65.7 0.0 6e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_dh_1 PF00441.24 ORF104347 - 0.17 12.1 0.0 0.34 11.1 0.0 1.5 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain Ank_2 PF12796.7 ORF99056 - 2.1e-18 66.7 2.5 2e-06 28.3 1.5 4.0 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF99056 - 9.9e-15 54.4 5.8 0.00027 21.2 0.7 5.1 3 1 2 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF99056 - 6.5e-10 38.4 2.9 2.7 8.8 0.0 6.2 6 0 0 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF99056 - 1.3e-09 38.4 6.0 0.0066 17.0 1.1 5.4 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF99056 - 1.7e-06 28.2 5.7 1.3 9.6 0.6 6.1 5 1 0 5 5 5 1 Ankyrin repeat Peptidase_M48 PF01435.18 ORF97015 - 7.7e-26 91.1 0.3 1.4e-25 90.2 0.3 1.4 1 0 0 1 1 1 1 Peptidase family M48 Alpha_kinase PF02816.18 ORF81231 - 1.2e-42 146.1 0.3 1.6e-42 145.7 0.3 1.2 1 0 0 1 1 1 1 Alpha-kinase family NTP_transf_2 PF01909.23 ORF81231 - 0.00093 19.4 0.0 0.0022 18.3 0.0 1.7 2 0 0 2 2 2 1 Nucleotidyltransferase domain AMP-binding PF00501.28 ORF71935 - 5e-68 229.6 0.1 6.2e-68 229.3 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF71935 - 9e-14 52.2 0.0 2.1e-13 51.1 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding_C_2 PF14535.6 ORF71935 - 0.16 12.3 0.3 0.55 10.6 0.1 2.1 2 0 0 2 2 2 0 AMP-binding enzyme C-terminal domain HTH_15 PF12324.8 ORF69008 - 0.085 12.8 0.0 0.21 11.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase MbeD_MobD PF04899.12 ORF68083 - 0.031 14.4 0.2 0.031 14.4 0.2 2.5 3 1 0 3 3 3 0 MbeD/MobD like SlyX PF04102.12 ORF68083 - 0.11 13.2 0.5 0.11 13.2 0.5 5.7 4 1 1 5 5 5 0 SlyX TMEM43 PF07787.12 ORF6733 - 8.1e-26 90.9 0.0 1.4e-25 90.2 0.0 1.4 1 1 0 1 1 1 1 Transmembrane protein 43 CrgA PF06781.12 ORF6733 - 1.1 9.4 2.7 2.4 8.3 0.8 2.3 2 0 0 2 2 2 0 Cell division protein CrgA DUF4064 PF13273.6 ORF6733 - 5.6 7.3 6.8 1.4 9.2 0.2 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) RIH_assoc PF08454.11 ORF62741 - 4.9e-19 68.1 5.3 1.7e-18 66.3 5.3 1.9 1 0 0 1 1 1 1 RyR and IP3R Homology associated DDT PF02791.17 ORF62741 - 0.09 13.1 0.1 0.19 12.0 0.1 1.5 1 0 0 1 1 1 0 DDT domain WW PF00397.26 ORF62741 - 0.37 10.9 0.1 0.37 10.9 0.1 2.5 3 0 0 3 3 3 0 WW domain Peptidase_M29 PF02073.15 ORF50527 - 0.021 13.6 0.0 0.041 12.6 0.0 1.4 1 0 0 1 1 1 0 Thermophilic metalloprotease (M29) RPW8 PF05659.11 ORF50527 - 0.048 13.4 1.7 0.14 11.9 1.7 1.7 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF1765 PF08578.10 ORF50527 - 0.12 12.8 0.8 0.21 12.0 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1765) EF-hand_7 PF13499.6 ORF46623 - 3.4e-11 43.4 6.6 1.1e-07 32.1 1.7 2.9 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF46623 - 5.4e-10 38.1 2.2 8.6e-06 24.9 0.1 2.8 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF46623 - 8.1e-10 37.8 1.1 1.9e-05 24.2 0.1 3.1 3 0 0 3 3 3 2 EF-hand domain Ion_trans PF00520.31 ORF46623 - 1.5e-08 34.2 9.4 2.6e-08 33.4 9.4 1.4 1 0 0 1 1 1 1 Ion transport protein EF-hand_5 PF13202.6 ORF46623 - 3.7e-06 26.2 0.8 0.00054 19.3 0.3 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF46623 - 2.9e-05 23.8 4.2 0.012 15.5 0.2 3.4 3 0 0 3 3 3 2 EF-hand domain pair Caleosin PF05042.13 ORF46623 - 0.015 15.2 0.3 1.5 8.7 0.1 2.4 2 0 0 2 2 2 0 Caleosin related protein ATP-synt_S1 PF05827.12 ORF46623 - 0.77 9.6 4.2 17 5.2 0.1 2.5 2 0 0 2 2 2 0 Vacuolar ATP synthase subunit S1 (ATP6S1) Thioesterase PF00975.20 ORF40962 - 1.9e-06 28.2 0.0 3.7e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Thioesterase domain FSH1 PF03959.13 ORF40962 - 0.0037 17.0 0.0 0.0093 15.6 0.0 1.7 2 0 0 2 2 2 1 Serine hydrolase (FSH1) Abhydrolase_3 PF07859.13 ORF40962 - 0.11 12.4 0.4 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 alpha/beta hydrolase fold RabGAP-TBC PF00566.18 ORF3673 - 1.5e-39 135.9 0.0 2.1e-39 135.4 0.0 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain zf-RanBP PF00641.18 ORF31572 - 0.0026 17.0 2.5 0.0054 16.0 2.5 1.5 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others SSB PF00436.25 ORF31572 - 0.071 13.2 0.9 7.4 6.7 0.1 2.6 2 0 0 2 2 2 0 Single-strand binding protein family Stc1 PF12898.7 ORF31572 - 0.25 11.9 3.8 0.51 10.9 0.4 2.8 2 0 0 2 2 2 0 Stc1 domain SKIP_SNW PF02731.15 ORF29993 - 1.2e-67 226.6 1.7 1.2e-67 226.6 1.7 2.0 2 0 0 2 2 2 1 SKIP/SNW domain cNMP_binding PF00027.29 ORF29233 - 4.5e-39 132.4 0.0 1.8e-19 69.6 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain DUF5586 PF17824.1 ORF29233 - 0.0034 16.6 0.0 0.0068 15.6 0.0 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5586) GerPC PF10737.9 ORF29233 - 0.015 15.4 1.2 4.4 7.3 0.0 3.0 3 0 0 3 3 3 0 Spore germination protein GerPC Dpy-30 PF05186.13 ORF29233 - 0.039 13.6 0.0 0.076 12.7 0.0 1.5 1 0 0 1 1 1 0 Dpy-30 motif DUF4846 PF16138.5 ORF29233 - 0.088 12.3 0.1 5.6 6.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (4846) ABC_tran_CTD PF16326.5 ORF29233 - 0.097 12.9 3.9 0.31 11.3 0.8 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain Nha1_C PF08619.10 ORF29233 - 0.73 9.0 6.4 1.1 8.4 5.6 1.8 1 1 1 2 2 2 0 Alkali metal cation/H+ antiporter Nha1 C terminus THF_DHG_CYH PF00763.23 ORF2906 - 0.001 19.3 0.0 0.0021 18.3 0.0 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DUF3343 PF11823.8 ORF2906 - 0.059 12.8 0.2 0.79 9.2 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) Pirin PF02678.16 ORF2746 - 2.1e-19 69.5 0.6 6.8e-19 67.8 0.6 1.8 1 1 0 1 1 1 1 Pirin Pirin_C PF05726.13 ORF2746 - 3.2e-17 62.8 0.0 1.2e-16 61.0 0.0 1.9 2 0 0 2 2 2 1 Pirin C-terminal cupin domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks33.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks33.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks33.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks33.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:12:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ShK PF01549.24 NODE_66846_length_238_cov_53.458128_g58905_i0reverse_frame_2 - 0.029 14.9 3.1 0.029 14.9 3.1 2.2 2 0 0 2 2 2 0 ShK domain-like YlaH PF14036.6 NODE_66843_length_238_cov_59.689655_g58902_i0reverse_frame_2 - 0.011 16.0 1.8 0.014 15.7 1.7 1.3 1 1 0 1 1 1 0 YlaH-like protein DUF2070 PF09843.9 NODE_66839_length_238_cov_65.645320_g58898_i0forward_frame_2 - 4.8 5.4 13.2 5.4 5.2 13.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) SelB-wing_1 PF09105.10 NODE_66838_length_238_cov_66.423645_g58897_i0forward_frame_3 - 0.029 14.3 0.2 0.043 13.8 0.2 1.3 1 0 0 1 1 1 0 Elongation factor SelB, winged helix DUF4386 PF14329.6 NODE_66837_length_238_cov_67.862069_g58896_i0reverse_frame_3 - 0.084 12.7 0.0 0.097 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4386) TPR_22 PF18833.1 NODE_66837_length_238_cov_67.862069_g58896_i0reverse_frame_2 - 0.026 14.7 1.4 0.037 14.2 1.4 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat JHBP PF06585.11 NODE_66836_length_238_cov_73.502463_g58895_i0reverse_frame_3 - 0.07 12.3 0.0 0.081 12.1 0.0 1.1 1 0 0 1 1 1 0 Haemolymph juvenile hormone binding protein (JHBP) Pex2_Pex12 PF04757.14 NODE_66836_length_238_cov_73.502463_g58895_i0forward_frame_3 - 0.044 13.4 0.5 0.048 13.2 0.5 1.0 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region Dickkopf_N PF04706.12 NODE_66834_length_238_cov_75.556650_g58893_i0forward_frame_3 - 0.042 14.3 0.1 0.042 14.3 0.1 1.7 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region Ferlin_C PF16165.5 NODE_66832_length_238_cov_92.216749_g58891_i0forward_frame_2 - 0.81 9.6 2.7 0.93 9.4 2.7 1.2 1 0 0 1 1 1 0 Ferlin C-terminus O-ag_pol_Wzy PF14296.6 NODE_66832_length_238_cov_92.216749_g58891_i0forward_frame_2 - 2.4 6.7 12.0 2.6 6.6 12.0 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy MNSV_P7B PF06692.11 NODE_66832_length_238_cov_92.216749_g58891_i0forward_frame_2 - 7.5 6.6 11.4 0.57 10.2 5.2 2.1 2 1 0 2 2 2 0 Melon necrotic spot virus P7B protein DUF4232 PF14016.6 NODE_66830_length_238_cov_98.679803_g58889_i0reverse_frame_2 - 0.027 14.6 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4232) SRP40_C PF05022.12 NODE_66826_length_238_cov_114.216749_g58885_i0reverse_frame_3 - 9.4 7.2 18.5 20 6.1 18.5 1.9 1 1 0 1 1 1 0 SRP40, C-terminal domain TILa PF12714.7 NODE_66824_length_238_cov_121.857143_g58883_i0forward_frame_3 - 0.19 11.7 2.9 0.28 11.2 2.9 1.2 1 0 0 1 1 1 0 TILa domain DUF5436 PF17504.2 NODE_66822_length_238_cov_140.600985_g58881_i0reverse_frame_3 - 3.5 8.0 9.0 20 5.6 9.0 2.0 1 1 0 1 1 1 0 Family of unknown function (DUF5436) Ldl_recept_a PF00057.18 NODE_66821_length_238_cov_145.935961_g58880_i0reverse_frame_3 - 7.7 6.8 8.2 0.7 10.2 1.0 2.4 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A PH_BEACH PF14844.6 NODE_66821_length_238_cov_145.935961_g58880_i0forward_frame_3 - 1.5e-06 28.2 0.0 1.6e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 PH domain associated with Beige/BEACH DUF1676 PF07898.13 NODE_66820_length_238_cov_151.591133_g58879_i0reverse_frame_2 - 0.023 14.8 0.4 0.023 14.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) PIRT PF15099.6 NODE_66816_length_238_cov_202.315271_g58875_i0forward_frame_3 - 0.018 14.6 0.1 0.02 14.5 0.1 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Rhodanese_C PF12368.8 NODE_66814_length_238_cov_240.261084_g58873_i0forward_frame_3 - 0.046 14.1 1.1 0.053 13.9 1.1 1.2 1 0 0 1 1 1 0 Rhodanase C-terminal Pep1_7 PF17232.2 NODE_66809_length_238_cov_76102.477833_g58868_i0reverse_frame_2 - 0.53 10.8 5.7 4 8.0 5.7 2.0 1 1 0 1 1 1 0 Elicitor peptide 1-7 PPDFL PF15060.6 NODE_66809_length_238_cov_76102.477833_g58868_i0forward_frame_3 - 0.17 12.4 0.1 0.22 12.1 0.1 1.1 1 0 0 1 1 1 0 Differentiation and proliferation regulator UPF0102 PF02021.17 NODE_66805_length_239_cov_0.911765_g58864_i0forward_frame_2 - 6.1e-17 61.6 0.0 7e-17 61.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 DUF234 PF03008.14 NODE_66805_length_239_cov_0.911765_g58864_i0forward_frame_2 - 0.0022 18.4 0.1 0.0027 18.1 0.1 1.4 1 1 0 1 1 1 1 Archaea bacterial proteins of unknown function NERD PF08378.11 NODE_66805_length_239_cov_0.911765_g58864_i0forward_frame_2 - 0.0099 16.3 0.0 0.011 16.2 0.0 1.1 1 0 0 1 1 1 1 Nuclease-related domain Hjc PF01870.18 NODE_66805_length_239_cov_0.911765_g58864_i0forward_frame_2 - 0.015 15.3 0.0 0.018 15.0 0.0 1.3 1 1 0 1 1 1 0 Archaeal holliday junction resolvase (hjc) Bromo_TP PF07524.13 NODE_66804_length_239_cov_0.941176_g58863_i0reverse_frame_3 - 0.091 12.8 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Bromodomain associated Med8 PF10232.9 NODE_66802_length_239_cov_0.980392_g58861_i0reverse_frame_2 - 0.052 13.1 0.2 0.054 13.1 0.2 1.1 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 AC_N PF16214.5 NODE_66800_length_239_cov_0.980392_g58859_i0forward_frame_2 - 2.1 7.4 4.2 2.3 7.3 4.2 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region TPR_7 PF13176.6 NODE_66796_length_239_cov_1.019608_g58855_i0reverse_frame_2 - 0.14 12.3 0.4 0.24 11.5 0.2 1.5 2 0 0 2 2 2 0 Tetratricopeptide repeat SMN PF06003.12 NODE_66793_length_239_cov_1.073529_g58852_i0forward_frame_3 - 6.8 5.9 7.8 6.7 5.9 7.8 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) PriA_CRR PF18319.1 NODE_66792_length_239_cov_1.083333_g58851_i0forward_frame_3 - 0.014 15.4 5.2 0.023 14.7 5.2 1.3 1 0 0 1 1 1 0 PriA DNA helicase Cys-rich region (CRR) domain PDCD2_C PF04194.13 NODE_66792_length_239_cov_1.083333_g58851_i0forward_frame_3 - 0.031 14.3 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain Med19 PF10278.9 NODE_66789_length_239_cov_1.132353_g58848_i0reverse_frame_2 - 0.18 11.7 0.0 0.21 11.5 0.0 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 ABC_tran PF00005.27 NODE_66787_length_239_cov_1.147059_g58846_i0reverse_frame_2 - 3.3e-08 34.1 0.0 3.4e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_66787_length_239_cov_1.147059_g58846_i0reverse_frame_2 - 0.00024 21.0 0.1 0.00024 21.0 0.1 1.0 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 NODE_66787_length_239_cov_1.147059_g58846_i0reverse_frame_2 - 0.051 13.0 0.0 0.054 12.9 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Histone PF00125.24 NODE_66781_length_239_cov_1.171569_g58840_i0forward_frame_3 - 0.04 14.3 1.5 0.047 14.0 1.5 1.0 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 Mak10 PF04112.13 NODE_66772_length_239_cov_1.264706_g58831_i0reverse_frame_3 - 0.13 11.7 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Mak10 subunit, NatC N(alpha)-terminal acetyltransferase a_DG1_N2 PF18424.1 NODE_66772_length_239_cov_1.264706_g58831_i0forward_frame_2 - 0.11 12.6 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Alpha-Dystroglycan N-terminal domain 2 Peripla_BP_4 PF13407.6 NODE_66771_length_239_cov_1.264706_g58830_i0reverse_frame_2 - 5.5e-10 39.3 0.4 5.8e-10 39.2 0.4 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Glyco_tran_WecB PF03808.13 NODE_66771_length_239_cov_1.264706_g58830_i0reverse_frame_2 - 0.029 14.3 0.0 0.033 14.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family RHD_dimer PF16179.5 NODE_66771_length_239_cov_1.264706_g58830_i0reverse_frame_2 - 0.079 13.0 0.3 0.1 12.7 0.3 1.1 1 0 0 1 1 1 0 Rel homology dimerisation domain Sarcoglycan_1 PF04790.13 NODE_66766_length_239_cov_1.352941_g58825_i0forward_frame_3 - 0.0095 15.3 1.2 0.01 15.2 1.2 1.1 1 0 0 1 1 1 1 Sarcoglycan complex subunit protein Chlam_PMP PF02415.17 NODE_66766_length_239_cov_1.352941_g58825_i0forward_frame_2 - 0.12 12.9 0.3 0.12 12.9 0.3 4.1 2 2 1 3 3 3 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat PUB PF09409.10 NODE_66762_length_239_cov_1.372549_g58821_i0reverse_frame_2 - 0.066 13.2 0.0 0.083 12.8 0.0 1.2 1 0 0 1 1 1 0 PUB domain F-box PF00646.33 NODE_66761_length_239_cov_1.372549_g58820_i0forward_frame_3 - 0.17 11.8 0.1 0.17 11.8 0.1 2.4 2 1 1 3 3 3 0 F-box domain DUF2418 PF10332.9 NODE_66757_length_239_cov_1.421569_g58816_i0forward_frame_2 - 2 9.0 4.9 2.5 8.7 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) ERK-JNK_inhib PF15002.6 NODE_66755_length_239_cov_1.431373_g58814_i0forward_frame_3 - 0.011 15.4 1.4 0.012 15.3 1.4 1.0 1 0 0 1 1 1 0 ERK and JNK pathways, inhibitor RSN1_7TM PF02714.15 NODE_66755_length_239_cov_1.431373_g58814_i0forward_frame_3 - 0.026 13.8 0.1 0.027 13.8 0.1 1.1 1 0 0 1 1 1 0 Calcium-dependent channel, 7TM region, putative phosphate Rpp20 PF12328.8 NODE_66754_length_239_cov_1.441176_g58813_i0forward_frame_3 - 0.0082 16.1 0.0 0.0094 15.9 0.0 1.0 1 0 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P Lamprin PF06403.11 NODE_66752_length_239_cov_1.450980_g58811_i0reverse_frame_3 - 0.017 15.1 0.7 0.018 15.0 0.7 1.1 1 0 0 1 1 1 0 Lamprin RBR PF17208.3 NODE_66751_length_239_cov_1.450980_g58810_i0reverse_frame_3 - 0.044 14.5 10.7 0.044 14.5 10.7 2.2 1 1 1 2 2 2 0 RNA binding Region DDE_5 PF13546.6 NODE_66751_length_239_cov_1.450980_g58810_i0reverse_frame_3 - 0.6 9.4 7.2 0.67 9.2 7.2 1.2 1 0 0 1 1 1 0 DDE superfamily endonuclease Metallophos PF00149.28 NODE_66745_length_239_cov_1.509804_g58804_i0forward_frame_2 - 1.6e-05 25.5 0.0 1.8e-05 25.4 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Pentaxin PF00354.17 NODE_66744_length_239_cov_1.514706_g58803_i0forward_frame_2 - 0.076 12.7 0.6 1.2 8.7 0.0 2.0 1 1 1 2 2 2 0 Pentaxin family APG6_N PF17675.1 NODE_66743_length_239_cov_1.529412_g58802_i0reverse_frame_2 - 0.019 15.5 1.5 0.022 15.3 1.5 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Metal_resist PF13801.6 NODE_66743_length_239_cov_1.529412_g58802_i0reverse_frame_2 - 0.041 14.1 4.9 0.047 13.9 4.9 1.1 1 0 0 1 1 1 0 Heavy-metal resistance DUF5330 PF17264.2 NODE_66743_length_239_cov_1.529412_g58802_i0forward_frame_3 - 0.014 15.4 0.1 1.1 9.3 0.2 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5330) Papilloma_E5 PF03025.14 NODE_66741_length_239_cov_1.563725_g58800_i0reverse_frame_2 - 0.058 13.6 1.2 0.08 13.1 0.5 1.5 2 0 0 2 2 2 0 Papillomavirus E5 WD40 PF00400.32 NODE_66741_length_239_cov_1.563725_g58800_i0forward_frame_3 - 9.9e-06 26.2 0.3 0.046 14.6 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat EamA PF00892.20 NODE_66739_length_239_cov_1.563725_g58798_i0reverse_frame_3 - 0.00057 20.1 2.8 0.00066 19.9 2.8 1.0 1 0 0 1 1 1 1 EamA-like transporter family T4-Gluco-transf PF09198.10 NODE_66736_length_239_cov_1.568627_g58795_i0forward_frame_2 - 0.052 13.1 0.0 0.087 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase zf-RING_10 PF16685.5 NODE_66734_length_239_cov_1.588235_g58793_i0reverse_frame_3 - 0.092 12.9 1.8 0.14 12.3 1.8 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 LisH_2 PF16045.5 NODE_66733_length_239_cov_1.593137_g58792_i0reverse_frame_3 - 0.11 11.6 0.4 0.18 10.9 0.4 1.4 1 0 0 1 1 1 0 LisH DUF5465 PF17553.2 NODE_66733_length_239_cov_1.593137_g58792_i0forward_frame_3 - 5 7.9 9.2 2.6 8.8 1.4 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5465) HTH_30 PF13556.6 NODE_66732_length_239_cov_1.598039_g58791_i0reverse_frame_2 - 0.13 12.0 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DNA_pol_B_2 PF03175.13 NODE_66730_length_239_cov_1.607843_g58789_i0forward_frame_2 - 0.00013 21.0 2.8 0.00014 20.9 2.8 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral DUF3136 PF11334.8 NODE_66730_length_239_cov_1.607843_g58789_i0forward_frame_2 - 0.085 12.7 0.2 0.15 11.9 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3136) Arm_vescicular PF18770.1 NODE_66729_length_239_cov_1.607843_g58788_i0reverse_frame_3 - 0.086 12.8 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor DUF656 PF04920.12 NODE_66728_length_239_cov_1.622549_g58787_i0forward_frame_2 - 0.024 14.6 0.0 0.027 14.4 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF656) Shugoshin_N PF07558.11 NODE_66727_length_239_cov_1.637255_g58786_i0reverse_frame_2 - 0.018 14.9 0.5 0.018 14.9 0.5 1.7 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region PP2C PF00481.21 NODE_66723_length_239_cov_1.740196_g58782_i0reverse_frame_3 - 0.0065 16.1 0.0 0.0065 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C HTH_36 PF13730.6 NODE_66723_length_239_cov_1.740196_g58782_i0reverse_frame_3 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3796 PF12676.7 NODE_66721_length_239_cov_1.764706_g58780_i0reverse_frame_2 - 0.024 15.0 5.0 0.031 14.7 5.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) DUF5559 PF17714.1 NODE_66720_length_239_cov_1.808824_g58779_i0forward_frame_3 - 0.046 13.6 0.1 0.05 13.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5559) WBP-1 PF11669.8 NODE_66718_length_239_cov_1.848039_g58777_i0reverse_frame_3 - 0.0073 16.9 0.7 0.0079 16.8 0.7 1.1 1 0 0 1 1 1 1 WW domain-binding protein 1 DUF1158 PF06643.11 NODE_66715_length_239_cov_1.901961_g58774_i0reverse_frame_3 - 1.6 9.3 6.2 11 6.6 6.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1158) Adipogenin PF15202.6 NODE_66712_length_239_cov_1.960784_g58771_i0reverse_frame_3 - 2.4 8.2 5.5 0.35 10.9 0.8 1.8 1 1 1 2 2 2 0 Adipogenin QueH PF02677.14 NODE_66712_length_239_cov_1.960784_g58771_i0reverse_frame_2 - 7.4 6.6 7.4 1.5 8.9 2.6 1.8 1 1 1 2 2 2 0 Epoxyqueuosine reductase QueH Pacifastin_I PF05375.13 NODE_66711_length_239_cov_1.970588_g58770_i0reverse_frame_3 - 0.089 12.5 3.5 0.12 12.1 3.5 1.2 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) zf-C2H2_4 PF13894.6 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.00032 21.3 2.7 0.00066 20.3 2.7 1.6 1 0 0 1 1 1 1 C2H2-type zinc finger zf-Di19 PF05605.12 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.00098 19.4 0.4 0.002 18.4 0.4 1.5 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2 PF00096.26 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.011 16.1 2.6 0.02 15.4 2.6 1.4 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.12 12.9 2.8 8.1 7.1 0.4 2.3 2 0 0 2 2 2 0 Zinc-finger double domain zf-H2C2_5 PF13909.6 NODE_66707_length_239_cov_1.990196_g58766_i0forward_frame_3 - 0.46 10.3 5.6 1.5 8.6 5.6 1.8 1 1 0 1 1 1 0 C2H2-type zinc-finger domain Gln_deamidase_2 PF18626.1 NODE_66704_length_239_cov_2.068627_g58763_i0reverse_frame_2 - 0.097 12.9 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Glutaminase RcsF PF16358.5 NODE_66703_length_239_cov_2.107843_g58762_i0forward_frame_2 - 0.14 12.2 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 RcsF lipoprotein zf-C3HC4_4 PF15227.6 NODE_66701_length_239_cov_2.127451_g58760_i0reverse_frame_3 - 0.068 13.3 4.0 0.82 9.9 0.2 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING CotJB PF12652.7 NODE_66701_length_239_cov_2.127451_g58760_i0forward_frame_3 - 0.01 16.0 0.1 0.013 15.7 0.1 1.2 1 0 0 1 1 1 0 CotJB protein Myb_DNA-binding PF00249.31 NODE_66701_length_239_cov_2.127451_g58760_i0forward_frame_2 - 2.9e-08 33.8 0.4 3.6e-08 33.5 0.4 1.1 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_66701_length_239_cov_2.127451_g58760_i0forward_frame_2 - 4.4e-05 23.6 0.7 6.2e-05 23.2 0.7 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain CSTF1_dimer PF16699.5 NODE_66701_length_239_cov_2.127451_g58760_i0forward_frame_2 - 0.1 12.4 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Cleavage stimulation factor subunit 1, dimerisation domain PAS_7 PF12860.7 NODE_66697_length_239_cov_2.200980_g58756_i0forward_frame_3 - 0.13 12.5 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 PAS fold GAF_3 PF13492.6 NODE_66697_length_239_cov_2.200980_g58756_i0forward_frame_2 - 0.015 15.6 0.0 0.016 15.5 0.0 1.1 1 0 0 1 1 1 0 GAF domain YrzO PF14142.6 NODE_66695_length_239_cov_2.245098_g58754_i0reverse_frame_2 - 0.27 11.2 0.9 0.51 10.3 0.9 1.5 1 0 0 1 1 1 0 YrzO-like protein Topoisom_bac PF01131.20 NODE_66695_length_239_cov_2.245098_g58754_i0forward_frame_3 - 4.5e-08 32.5 0.0 4.6e-08 32.5 0.0 1.0 1 0 0 1 1 1 1 DNA topoisomerase Trm112p PF03966.16 NODE_66694_length_239_cov_2.259804_g58753_i0forward_frame_2 - 0.16 12.6 0.1 0.21 12.2 0.1 1.4 1 1 0 1 1 1 0 Trm112p-like protein Neurexophilin PF06312.12 NODE_66692_length_239_cov_2.303922_g58751_i0reverse_frame_2 - 0.063 12.7 3.2 0.061 12.8 3.2 1.0 1 0 0 1 1 1 0 Neurexophilin DUF2407_C PF13373.6 NODE_66691_length_239_cov_2.318627_g58750_i0forward_frame_2 - 0.1 12.8 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain Ocular_alb PF02101.15 NODE_66688_length_239_cov_2.343137_g58747_i0reverse_frame_2 - 0.035 13.0 0.5 0.039 12.9 0.5 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein PDCD7 PF16021.5 NODE_66686_length_239_cov_2.357843_g58745_i0reverse_frame_3 - 0.03 13.4 1.1 0.034 13.3 1.1 1.0 1 0 0 1 1 1 0 Programmed cell death protein 7 VATC PF18716.1 NODE_66686_length_239_cov_2.357843_g58745_i0forward_frame_2 - 1.5 8.7 8.4 6.1 6.8 0.1 2.5 2 0 0 2 2 2 0 Vms1-associating treble clef domain DUF1874 PF08960.10 NODE_66685_length_239_cov_2.357843_g58744_i0forward_frame_3 - 0.12 12.5 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1874) WD40 PF00400.32 NODE_66684_length_239_cov_2.362745_g58743_i0reverse_frame_2 - 2.4e-05 25.0 0.1 0.00015 22.5 0.0 2.0 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_66684_length_239_cov_2.362745_g58743_i0reverse_frame_2 - 0.04 14.2 0.0 0.041 14.2 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Peptidase_S31 PF05578.12 NODE_66683_length_239_cov_2.401961_g58742_i0forward_frame_2 - 0.046 13.2 0.1 0.06 12.9 0.1 1.2 1 0 0 1 1 1 0 Pestivirus NS3 polyprotein peptidase S31 Sugar_tr PF00083.24 NODE_66679_length_239_cov_2.465686_g58738_i0reverse_frame_2 - 3.1e-11 42.8 0.1 3.5e-11 42.6 0.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter PTR2 PF00854.21 NODE_66679_length_239_cov_2.465686_g58738_i0reverse_frame_2 - 0.12 11.2 0.1 0.12 11.2 0.1 1.0 1 0 0 1 1 1 0 POT family Peptidase_C53 PF05550.11 NODE_66676_length_239_cov_2.524510_g58735_i0forward_frame_2 - 0.18 11.5 0.7 0.21 11.3 0.7 1.1 1 0 0 1 1 1 0 Pestivirus Npro endopeptidase C53 RVT_2 PF07727.14 NODE_66672_length_239_cov_2.568627_g58731_i0forward_frame_3 - 1.3e-06 28.3 0.0 1.5e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Cyclin_N PF00134.23 NODE_66671_length_239_cov_2.691176_g58730_i0forward_frame_2 - 1.3e-08 34.7 0.1 1.5e-08 34.5 0.1 1.0 1 0 0 1 1 1 1 Cyclin, N-terminal domain DUF4127 PF13552.6 NODE_66671_length_239_cov_2.691176_g58730_i0forward_frame_2 - 0.044 12.4 0.0 0.046 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4127) Flu_C_NS2 PF03555.14 NODE_66671_length_239_cov_2.691176_g58730_i0forward_frame_2 - 0.05 13.8 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 Influenza C non-structural protein (NS2) Na_K-ATPase PF00287.18 NODE_66670_length_239_cov_2.730392_g58729_i0reverse_frame_3 - 0.021 14.0 0.0 0.024 13.8 0.0 1.0 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain NinD PF17466.2 NODE_66668_length_239_cov_2.769608_g58727_i0forward_frame_2 - 0.16 12.0 0.1 0.23 11.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function LmjF365940-deam PF14421.6 NODE_66667_length_239_cov_2.843137_g58726_i0reverse_frame_2 - 0.16 11.5 0.2 0.14 11.7 0.2 1.1 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases PB1 PF00564.24 NODE_66664_length_239_cov_3.093137_g58723_i0forward_frame_3 - 0.073 13.0 0.0 0.081 12.9 0.0 1.2 1 0 0 1 1 1 0 PB1 domain Peripla_BP_4 PF13407.6 NODE_66664_length_239_cov_3.093137_g58723_i0forward_frame_3 - 0.093 12.3 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 NODE_66664_length_239_cov_3.093137_g58723_i0forward_frame_3 - 0.18 11.2 0.0 0.19 11.1 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family Phage_tail_3 PF08813.11 NODE_66663_length_239_cov_3.127451_g58722_i0forward_frame_2 - 0.11 12.1 0.0 0.12 11.9 0.0 1.0 1 0 0 1 1 1 0 Phage tail tube protein, TTP Gemini_AC4_5 PF04807.12 NODE_66662_length_239_cov_3.151961_g58721_i0forward_frame_3 - 0.087 12.5 0.3 0.2 11.4 0.3 1.6 1 0 0 1 1 1 0 Geminivirus AC4/5 conserved region DUF667 PF05018.13 NODE_66659_length_239_cov_3.421569_g58718_i0reverse_frame_2 - 0.048 13.4 0.0 0.054 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF667) DUF2897 PF11446.8 NODE_66657_length_239_cov_3.529412_g58716_i0reverse_frame_2 - 0.36 10.8 2.7 0.24 11.3 1.2 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) GRDP-like PF07173.12 NODE_66655_length_239_cov_3.696078_g58714_i0reverse_frame_2 - 0.11 13.2 0.2 0.12 13.0 0.2 1.1 1 0 0 1 1 1 0 Glycine-rich domain-containing protein-like DSL PF01414.19 NODE_66651_length_239_cov_4.049020_g58710_i0forward_frame_2 - 0.033 14.5 1.1 0.045 14.0 1.1 1.3 1 0 0 1 1 1 0 Delta serrate ligand LON_substr_bdg PF02190.16 NODE_66649_length_239_cov_4.661765_g58708_i0reverse_frame_2 - 0.0007 19.5 0.5 0.00088 19.2 0.5 1.2 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain NIP_1 PF08995.10 NODE_66644_length_239_cov_17.313725_g58703_i0reverse_frame_3 - 8.7 6.8 10.0 3.1 8.3 3.9 2.2 1 1 1 2 2 2 0 Necrosis inducing protein-1 CaM_binding PF07839.11 NODE_66642_length_239_cov_27.897059_g58701_i0forward_frame_2 - 0.035 14.8 4.5 0.043 14.6 4.5 1.1 1 0 0 1 1 1 0 Plant calmodulin-binding domain SCP2_2 PF13530.6 NODE_66640_length_239_cov_29.720588_g58699_i0reverse_frame_2 - 0.028 14.8 0.0 0.031 14.7 0.0 1.1 1 0 0 1 1 1 0 Sterol carrier protein domain SCP2_2 PF13530.6 NODE_66639_length_239_cov_29.916667_g58698_i0reverse_frame_2 - 0.019 15.3 0.0 0.022 15.2 0.0 1.1 1 0 0 1 1 1 0 Sterol carrier protein domain NTR2 PF15458.6 NODE_66638_length_239_cov_32.367647_g58697_i0forward_frame_3 - 0.052 13.1 3.4 0.058 12.9 3.4 1.0 1 0 0 1 1 1 0 Nineteen complex-related protein 2 Orthoreo_P10 PF07204.11 NODE_66635_length_239_cov_38.691176_g58694_i0forward_frame_2 - 0.023 14.6 1.2 0.03 14.3 1.2 1.3 1 1 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DUF3732 PF12532.8 NODE_66634_length_239_cov_39.333333_g58693_i0forward_frame_3 - 0.04 13.5 1.0 0.045 13.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3732) NUP PF06516.11 NODE_66634_length_239_cov_39.333333_g58693_i0forward_frame_3 - 0.065 12.5 0.1 0.07 12.3 0.1 1.0 1 0 0 1 1 1 0 Purine nucleoside permease (NUP) Holin_BlyA PF05102.12 NODE_66633_length_239_cov_39.558824_g58692_i0forward_frame_2 - 0.032 14.2 1.1 0.044 13.8 1.1 1.3 1 0 0 1 1 1 0 holin, BlyA family Pex24p PF06398.11 NODE_66633_length_239_cov_39.558824_g58692_i0forward_frame_2 - 1.8 7.4 4.7 2 7.3 4.7 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Herpes_DNAp_acc PF04929.12 NODE_66632_length_239_cov_41.681373_g58691_i0reverse_frame_3 - 1.6 7.6 7.7 1.7 7.6 7.7 1.0 1 0 0 1 1 1 0 Herpes DNA replication accessory factor Ras PF00071.22 NODE_66631_length_239_cov_44.014706_g58690_i0reverse_frame_3 - 0.0032 17.1 0.0 0.0048 16.5 0.0 1.3 1 0 0 1 1 1 1 Ras family FKBP_C PF00254.28 NODE_66631_length_239_cov_44.014706_g58690_i0reverse_frame_3 - 0.08 13.3 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 FKBP-type peptidyl-prolyl cis-trans isomerase STOP PF05217.12 NODE_66631_length_239_cov_44.014706_g58690_i0reverse_frame_2 - 0.0093 16.2 1.6 0.0093 16.2 1.6 1.8 2 0 0 2 2 2 1 STOP protein Asp PF00026.23 NODE_66630_length_239_cov_44.210784_g58689_i0forward_frame_2 - 9e-05 22.0 0.0 0.00011 21.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF3188 PF11384.8 NODE_66629_length_239_cov_44.446078_g58688_i0reverse_frame_3 - 0.16 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3188) Glyco_transf_28 PF03033.20 NODE_66629_length_239_cov_44.446078_g58688_i0forward_frame_3 - 0.00027 21.0 0.0 0.00033 20.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain NA37 PF04245.13 NODE_66628_length_239_cov_44.828431_g58687_i0reverse_frame_2 - 0.0048 16.4 1.6 0.006 16.1 1.6 1.0 1 0 0 1 1 1 1 37-kD nucleoid-associated bacterial protein DUF3458_C PF17432.2 NODE_66623_length_239_cov_47.274510_g58682_i0forward_frame_3 - 0.033 13.6 0.0 0.035 13.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3458_C) ARM repeats THP2 PF09432.10 NODE_66623_length_239_cov_47.274510_g58682_i0forward_frame_3 - 0.036 14.1 0.3 0.04 14.0 0.3 1.1 1 0 0 1 1 1 0 Tho complex subunit THP2 FAS_N PF17828.1 NODE_66622_length_239_cov_50.671569_g58681_i0reverse_frame_2 - 0.013 15.5 0.1 0.014 15.4 0.1 1.1 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta DUF1082 PF06449.11 NODE_66621_length_239_cov_52.200980_g58680_i0forward_frame_2 - 0.085 12.7 0.6 0.18 11.6 0.6 1.6 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) APAF1_C PF17908.1 NODE_66618_length_239_cov_58.112745_g58677_i0forward_frame_2 - 0.038 14.0 0.0 0.038 14.0 0.0 1.0 1 0 0 1 1 1 0 APAF-1 helical domain CHAT PF12770.7 NODE_66616_length_239_cov_60.985294_g58675_i0forward_frame_2 - 0.00099 18.6 0.0 0.001 18.5 0.0 1.0 1 0 0 1 1 1 1 CHAT domain Raptor_N PF14538.6 NODE_66616_length_239_cov_60.985294_g58675_i0forward_frame_2 - 0.017 15.1 0.0 0.019 14.9 0.0 1.1 1 0 0 1 1 1 0 Raptor N-terminal CASPase like domain Peptidase_C25 PF01364.18 NODE_66616_length_239_cov_60.985294_g58675_i0forward_frame_2 - 0.029 13.6 0.1 0.032 13.4 0.1 1.0 1 0 0 1 1 1 0 Peptidase family C25 Peptidase_C14 PF00656.22 NODE_66616_length_239_cov_60.985294_g58675_i0forward_frame_2 - 0.13 12.2 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Caspase domain Rod_cone_degen PF15201.6 NODE_66614_length_239_cov_66.529412_g58673_i0reverse_frame_3 - 0.072 13.2 0.2 0.072 13.2 0.2 1.4 2 0 0 2 2 2 0 Progressive rod-cone degeneration Viral_protease PF08715.10 NODE_66609_length_239_cov_82.397059_g58668_i0reverse_frame_3 - 0.064 12.6 0.0 0.064 12.6 0.0 1.0 1 0 0 1 1 1 0 Papain like viral protease Dicty_CTDC PF00526.18 NODE_66598_length_239_cov_121.039216_g58657_i0reverse_frame_3 - 0.3 11.0 3.4 4.8 7.2 0.1 2.5 2 1 0 2 2 2 0 Dictyostelium (slime mold) repeat FBA_2 PF07735.17 NODE_66598_length_239_cov_121.039216_g58657_i0reverse_frame_3 - 0.59 10.3 5.2 2.9 8.1 5.2 2.1 1 1 0 1 1 1 0 F-box associated GAPT PF11770.8 NODE_66597_length_239_cov_125.647059_g58656_i0reverse_frame_2 - 0.1 12.4 0.5 0.12 12.2 0.5 1.1 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) DUF468 PF04318.12 NODE_66596_length_239_cov_140.627451_g58655_i0forward_frame_2 - 0.2 12.4 3.3 0.23 12.2 3.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF468) PRNT PF15174.6 NODE_66591_length_239_cov_194.480392_g58650_i0forward_frame_3 - 0.14 12.2 0.0 0.14 12.2 0.0 1.7 2 0 0 2 2 2 0 Prion-related protein testis-specific FeThRed_B PF02943.15 NODE_66588_length_239_cov_323.333333_g58647_i0reverse_frame_2 - 0.014 15.4 1.5 0.016 15.2 1.5 1.2 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain IL4 PF00727.18 NODE_66587_length_239_cov_337.406863_g58646_i0reverse_frame_2 - 0.0044 17.2 0.5 0.0046 17.2 0.5 1.1 1 0 0 1 1 1 1 Interleukin 4 DUF5626 PF18540.1 NODE_66587_length_239_cov_337.406863_g58646_i0reverse_frame_2 - 0.11 13.1 1.5 0.35 11.4 1.5 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5626) ADD_DNMT3 PF17980.1 NODE_66586_length_239_cov_340.024510_g58645_i0reverse_frame_3 - 0.054 13.5 0.1 0.12 12.4 0.1 1.7 1 0 0 1 1 1 0 Cysteine rich ADD domain in DNMT3 DUF1691 PF07950.11 NODE_66586_length_239_cov_340.024510_g58645_i0reverse_frame_3 - 0.17 12.6 0.0 0.25 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1691) Caskin-Pro-rich PF16907.5 NODE_66585_length_239_cov_370.759804_g58644_i0forward_frame_3 - 8.7 7.0 10.5 51 4.5 10.3 1.9 1 1 0 1 1 1 0 Proline rich region of Caskin proteins MiAMP1 PF09117.10 NODE_66579_length_239_cov_8277.985294_g58638_i0forward_frame_2 - 0.066 13.5 0.0 0.075 13.3 0.0 1.1 1 0 0 1 1 1 0 MiAMP1 Herpes_US9 PF06072.11 NODE_66579_length_239_cov_8277.985294_g58638_i0forward_frame_2 - 0.28 11.1 1.6 1.5 8.8 0.7 2.0 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 JAMP PF05571.12 NODE_66576_length_240_cov_0.780488_g58635_i0forward_frame_2 - 1.3 8.6 3.6 1.3 8.6 3.6 1.1 1 0 0 1 1 1 0 JNK1/MAPK8-associated membrane protein VanY PF02557.17 NODE_66575_length_240_cov_0.897561_g58634_i0forward_frame_2 - 0.11 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase Ribosomal_S21 PF01165.20 NODE_66573_length_240_cov_0.970732_g58632_i0reverse_frame_2 - 0.17 11.6 0.3 0.17 11.6 0.3 2.7 2 2 2 4 4 4 0 Ribosomal protein S21 PRR18 PF15671.5 NODE_66573_length_240_cov_0.970732_g58632_i0forward_frame_2 - 0.18 11.6 9.4 0.19 11.6 9.4 1.0 1 0 0 1 1 1 0 Proline-rich protein family 18 DUF126 PF01989.16 NODE_66572_length_240_cov_0.970732_g58631_i0reverse_frame_2 - 0.11 12.3 0.2 0.21 11.4 0.1 1.6 1 1 0 1 1 1 0 Aconitase X swivel domain Stathmin PF00836.19 NODE_66570_length_240_cov_0.990244_g58629_i0reverse_frame_3 - 0.024 14.6 0.0 0.028 14.4 0.0 1.0 1 0 0 1 1 1 0 Stathmin family Ste5 PF11610.8 NODE_66568_length_240_cov_1.068293_g58627_i0reverse_frame_2 - 0.1 12.5 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Scaffold protein Ste5, Fus3-binding region TilS PF09179.11 NODE_66564_length_240_cov_1.131707_g58623_i0reverse_frame_2 - 0.0022 18.5 0.3 0.0031 18.0 0.3 1.3 1 0 0 1 1 1 1 TilS substrate binding domain Troponin-I_N PF11636.8 NODE_66564_length_240_cov_1.131707_g58623_i0reverse_frame_2 - 0.17 11.8 0.5 0.17 11.8 0.5 2.0 2 0 0 2 2 2 0 Troponin I residues 1-32 Ribosomal_60s PF00428.19 NODE_66562_length_240_cov_1.156098_g58621_i0reverse_frame_3 - 4.8 7.8 10.6 7 7.3 10.6 1.3 1 1 0 1 1 1 0 60s Acidic ribosomal protein NST1 PF13945.6 NODE_66562_length_240_cov_1.156098_g58621_i0reverse_frame_2 - 7.1 6.7 20.8 8.2 6.5 20.8 1.0 1 0 0 1 1 1 0 Salt tolerance down-regulator Menin PF05053.13 NODE_66562_length_240_cov_1.156098_g58621_i0reverse_frame_2 - 8.7 4.6 18.7 9.3 4.5 18.7 1.0 1 0 0 1 1 1 0 Menin DUF2721 PF11026.8 NODE_66562_length_240_cov_1.156098_g58621_i0forward_frame_3 - 5.1 7.0 14.4 6.5 6.7 14.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) EcpB_C PF18649.1 NODE_66557_length_240_cov_1.170732_g58616_i0reverse_frame_2 - 0.083 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 EcpB C-terminal domain SRCR PF00530.18 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 1.5e-11 44.7 0.2 1.7e-11 44.5 0.2 1.0 1 0 0 1 1 1 1 Scavenger receptor cysteine-rich domain SRCR_2 PF15494.6 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 9.3e-08 32.5 0.1 1.1e-07 32.3 0.1 1.2 1 1 0 1 1 1 1 Scavenger receptor cysteine-rich domain Hepsin-SRCR PF09272.10 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 0.0003 21.3 0.0 0.00032 21.2 0.0 1.2 1 0 0 1 1 1 1 Hepsin, SRCR domain Toxin_23 PF08093.11 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 0.012 15.7 0.5 5.6 7.2 0.1 2.6 2 0 0 2 2 2 0 Magi 5 toxic peptide family YecR PF13992.6 NODE_66547_length_240_cov_1.307317_g58606_i0forward_frame_2 - 0.062 13.6 3.3 0.083 13.2 3.3 1.3 1 1 0 1 1 1 0 YecR-like lipoprotein Sarcoglycan_2 PF05510.13 NODE_66546_length_240_cov_1.321951_g58605_i0reverse_frame_3 - 0.0013 17.6 0.3 0.0013 17.6 0.3 1.0 1 0 0 1 1 1 1 Sarcoglycan alpha/epsilon GBP PF02263.19 NODE_66543_length_240_cov_1.360976_g58602_i0forward_frame_3 - 9.4e-23 80.8 0.2 9.8e-23 80.7 0.2 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain RHD3 PF05879.12 NODE_66543_length_240_cov_1.360976_g58602_i0forward_frame_3 - 0.12 10.5 0.0 0.13 10.4 0.0 1.0 1 0 0 1 1 1 0 Root hair defective 3 GTP-binding protein (RHD3) BCAS3 PF12490.8 NODE_66543_length_240_cov_1.360976_g58602_i0forward_frame_3 - 0.16 11.5 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 WYL_3 PF18488.1 NODE_66540_length_240_cov_1.375610_g58599_i0forward_frame_2 - 0.07 13.5 0.0 0.081 13.3 0.0 1.2 1 0 0 1 1 1 0 WYL domain ESAG1 PF03238.13 NODE_66539_length_240_cov_1.375610_g58598_i0reverse_frame_3 - 0.006 16.1 0.4 0.0061 16.0 0.4 1.1 1 0 0 1 1 1 1 ESAG protein Lamprin PF06403.11 NODE_66538_length_240_cov_1.380488_g58597_i0forward_frame_3 - 1.6 8.7 11.4 2.3 8.1 11.4 1.4 1 1 0 1 1 1 0 Lamprin Sporozoite_P67 PF05642.11 NODE_66538_length_240_cov_1.380488_g58597_i0forward_frame_3 - 1.7 6.6 4.3 1.8 6.6 4.3 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Lamprin PF06403.11 NODE_66538_length_240_cov_1.380488_g58597_i0forward_frame_2 - 1.5 8.7 11.2 4.6 7.2 11.2 1.6 1 1 0 1 1 1 0 Lamprin RTT107_BRCT_5 PF16770.5 NODE_66537_length_240_cov_1.400000_g58596_i0reverse_frame_2 - 0.11 12.3 2.4 0.18 11.7 2.4 1.4 1 1 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain Cucumopine_C PF18631.1 NODE_66537_length_240_cov_1.400000_g58596_i0forward_frame_2 - 0.11 12.5 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain TraQ PF09679.10 NODE_66530_length_240_cov_1.517073_g58589_i0reverse_frame_3 - 0.092 12.7 0.5 0.11 12.4 0.5 1.2 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin chaperone (TraQ) F-box-like PF12937.7 NODE_66530_length_240_cov_1.517073_g58589_i0forward_frame_3 - 0.11 12.4 0.3 0.16 11.9 0.3 1.3 1 0 0 1 1 1 0 F-box-like PHD_2 PF13831.6 NODE_66529_length_240_cov_1.526829_g58588_i0reverse_frame_3 - 0.047 13.3 1.4 0.047 13.3 1.4 1.5 2 0 0 2 2 2 0 PHD-finger zf-CCCH_4 PF18044.1 NODE_66528_length_240_cov_1.531707_g58587_i0forward_frame_3 - 0.012 15.4 1.4 0.017 14.9 0.2 1.9 2 0 0 2 2 2 0 CCCH-type zinc finger zf-like PF04071.12 NODE_66525_length_240_cov_1.541463_g58584_i0reverse_frame_3 - 0.2 11.6 3.5 5.2 7.1 0.1 2.1 2 0 0 2 2 2 0 Cysteine-rich small domain MMACHC PF16690.5 NODE_66523_length_240_cov_1.556098_g58582_i0forward_frame_2 - 0.13 11.9 0.1 0.14 11.8 0.1 1.0 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type C family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks340.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks340.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks340.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks340.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Uricase PF01014.18 NODE_66520_length_240_cov_1.585366_g58579_i0reverse_frame_2 - 0.17 12.2 0.0 0.22 11.8 0.0 1.2 1 0 0 1 1 1 0 Uricase LRR_4 PF12799.7 NODE_66517_length_240_cov_1.614634_g58576_i0reverse_frame_3 - 1.6e-12 47.4 27.0 1.6e-07 31.5 10.3 2.1 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 NODE_66517_length_240_cov_1.614634_g58576_i0reverse_frame_3 - 1.6e-06 27.7 1.4 1.8e-06 27.6 1.4 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 NODE_66517_length_240_cov_1.614634_g58576_i0reverse_frame_3 - 1.8e-05 24.4 13.6 0.00016 21.4 13.4 2.3 1 1 0 1 1 1 1 Leucine rich repeat LRR_6 PF13516.6 NODE_66517_length_240_cov_1.614634_g58576_i0reverse_frame_3 - 0.0032 17.4 8.4 0.4 10.9 0.1 3.9 4 0 0 4 4 4 2 Leucine Rich repeat LRR_1 PF00560.33 NODE_66517_length_240_cov_1.614634_g58576_i0reverse_frame_3 - 0.056 14.0 10.9 0.3 11.8 0.3 3.0 3 0 0 3 3 3 0 Leucine Rich Repeat Arm_3 PF16186.5 NODE_66517_length_240_cov_1.614634_g58576_i0reverse_frame_3 - 0.12 11.9 0.1 0.33 10.6 0.0 1.8 1 1 1 2 2 2 0 Atypical Arm repeat DUF5330 PF17264.2 NODE_66516_length_240_cov_1.614634_g58575_i0reverse_frame_2 - 0.12 12.4 0.9 0.2 11.7 0.9 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5330) CarbpepA_inh PF02977.15 NODE_66515_length_240_cov_1.634146_g58574_i0reverse_frame_3 - 0.32 10.8 6.9 0.18 11.6 4.9 1.6 1 1 1 2 2 2 0 Carboxypeptidase A inhibitor 7tm_4 PF13853.6 NODE_66512_length_240_cov_1.673171_g58571_i0reverse_frame_3 - 0.014 15.2 0.1 0.015 15.0 0.1 1.0 1 0 0 1 1 1 0 Olfactory receptor Arabinose_Iso_C PF11762.8 NODE_66512_length_240_cov_1.673171_g58571_i0forward_frame_3 - 0.14 12.0 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 L-arabinose isomerase C-terminal domain F-box PF00646.33 NODE_66511_length_240_cov_1.678049_g58570_i0forward_frame_2 - 0.017 15.0 1.3 0.017 15.0 1.3 1.5 2 0 0 2 2 2 0 F-box domain Methyltransf_13 PF08421.11 NODE_66508_length_240_cov_1.697561_g58567_i0reverse_frame_2 - 0.04 14.2 0.1 0.058 13.6 0.1 1.3 1 0 0 1 1 1 0 Putative zinc binding domain Ac76 PF05814.11 NODE_66505_length_240_cov_1.741463_g58564_i0forward_frame_3 - 1.7 8.7 6.4 2.4 8.2 6.4 1.3 1 0 0 1 1 1 0 Orf76 (Ac76) C1_2 PF03107.16 NODE_66504_length_240_cov_1.746341_g58563_i0forward_frame_2 - 0.042 14.2 3.5 0.042 14.2 3.5 2.3 1 1 1 3 3 3 0 C1 domain Ribosomal_S14 PF00253.21 NODE_66504_length_240_cov_1.746341_g58563_i0forward_frame_2 - 0.55 10.0 8.1 0.3 10.9 5.8 1.8 1 1 1 2 2 2 0 Ribosomal protein S14p/S29e LRRNT PF01462.18 NODE_66502_length_240_cov_1.800000_g58561_i0reverse_frame_3 - 0.16 11.6 5.2 2 8.2 2.4 2.2 2 0 0 2 2 2 0 Leucine rich repeat N-terminal domain Tautomerase PF01361.21 NODE_66501_length_240_cov_1.800000_g58560_i0reverse_frame_2 - 5.2e-10 39.1 0.1 7.4e-10 38.6 0.1 1.2 1 0 0 1 1 1 1 Tautomerase enzyme DUF1682 PF07946.14 NODE_66498_length_240_cov_1.858537_g58557_i0reverse_frame_2 - 0.02 14.1 0.0 0.024 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) STAR_dimer PF16544.5 NODE_66498_length_240_cov_1.858537_g58557_i0reverse_frame_2 - 0.078 12.6 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Homodimerisation region of STAR domain protein Fun_ATP-synt_8 PF05933.13 NODE_66494_length_240_cov_1.887805_g58553_i0reverse_frame_3 - 0.036 14.2 1.4 0.036 14.2 1.4 1.6 2 0 0 2 2 2 0 Fungal ATP synthase protein 8 (A6L) DUF276 PF03434.13 NODE_66493_length_240_cov_1.887805_g58552_i0reverse_frame_2 - 0.012 14.8 0.1 0.014 14.6 0.1 1.1 1 0 0 1 1 1 0 DUF276 TMEM234 PF10639.9 NODE_66493_length_240_cov_1.887805_g58552_i0forward_frame_3 - 0.11 12.6 0.5 0.12 12.4 0.5 1.1 1 0 0 1 1 1 0 Putative transmembrane family 234 DZR PF12773.7 NODE_66492_length_240_cov_1.897561_g58551_i0reverse_frame_3 - 0.0034 17.4 1.1 0.0051 16.8 1.1 1.2 1 0 0 1 1 1 1 Double zinc ribbon Ribosomal_L32p PF01783.23 NODE_66492_length_240_cov_1.897561_g58551_i0reverse_frame_3 - 0.065 13.5 0.2 0.08 13.2 0.2 1.2 1 0 0 1 1 1 0 Ribosomal L32p protein family Gemini_AC4_5 PF04807.12 NODE_66491_length_240_cov_1.902439_g58550_i0reverse_frame_2 - 0.9 9.3 0.1 0.9 9.3 0.1 2.1 3 0 0 3 3 3 0 Geminivirus AC4/5 conserved region RseC_MucC PF04246.12 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.0094 15.9 1.7 0.011 15.7 1.7 1.1 1 0 0 1 1 1 1 Positive regulator of sigma(E), RseC/MucC Na_Ca_ex PF01699.24 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.065 13.2 7.0 0.075 13.0 7.0 1.1 1 0 0 1 1 1 0 Sodium/calcium exchanger protein DUF2208 PF09973.9 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.098 12.3 7.3 0.11 12.1 7.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) Tmemb_55A PF09788.9 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.11 11.5 0.9 0.12 11.5 0.9 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A SLATT_3 PF18184.1 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.14 12.3 0.3 0.17 12.1 0.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 3 DUF2207 PF09972.9 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.27 9.9 3.7 0.28 9.9 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3043 PF11241.8 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.36 10.8 3.4 0.51 10.3 3.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Ac81 PF05820.11 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.39 10.3 5.7 0.46 10.0 5.7 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 YajC PF02699.15 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 0.79 9.6 5.2 0.14 12.0 1.2 1.7 1 1 1 2 2 2 0 Preprotein translocase subunit DUF3687 PF12459.8 NODE_66490_length_240_cov_1.926829_g58549_i0forward_frame_2 - 3.2 7.3 10.9 1.6 8.3 0.6 2.2 1 1 1 2 2 2 0 D-Ala-teichoic acid biosynthesis protein Read-through PF16814.5 NODE_66488_length_240_cov_1.936585_g58547_i0reverse_frame_2 - 0.098 12.4 0.2 0.11 12.2 0.2 1.0 1 0 0 1 1 1 0 Read-through domain Gmad1 PF10647.9 NODE_66488_length_240_cov_1.936585_g58547_i0forward_frame_3 - 0.22 11.2 0.0 0.24 11.1 0.0 1.0 1 0 0 1 1 1 0 Lipoprotein LpqB beta-propeller domain DUF4505 PF14956.6 NODE_66488_length_240_cov_1.936585_g58547_i0forward_frame_2 - 0.31 10.8 3.7 0.38 10.5 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4505) PGM_PMM_III PF02880.16 NODE_66486_length_240_cov_1.946341_g58545_i0forward_frame_3 - 1.1e-13 51.4 0.0 1.3e-13 51.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III P5-ATPase PF12409.8 NODE_66481_length_240_cov_2.000000_g58540_i0reverse_frame_3 - 0.25 11.5 4.9 0.12 12.5 3.0 1.4 1 1 0 1 1 1 0 P5-type ATPase cation transporter T4_baseplate PF12322.8 NODE_66481_length_240_cov_2.000000_g58540_i0reverse_frame_2 - 0.01 15.3 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 0 T4 bacteriophage base plate protein SK_channel PF03530.14 NODE_66481_length_240_cov_2.000000_g58540_i0reverse_frame_2 - 0.037 14.0 0.2 0.039 13.9 0.2 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel CRAL_TRIO PF00650.20 NODE_66481_length_240_cov_2.000000_g58540_i0forward_frame_2 - 2.2e-09 37.2 0.0 2.6e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain Tom6 PF17112.5 NODE_66481_length_240_cov_2.000000_g58540_i0forward_frame_2 - 0.19 11.3 0.1 0.27 10.8 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom6, fungal YbfN PF13982.6 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_3 - 0.22 11.8 2.7 12 6.2 0.9 2.1 1 1 1 2 2 2 0 YbfN-like lipoprotein TNFR_c6 PF00020.18 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.0051 17.2 8.1 0.58 10.6 3.4 2.5 1 1 1 2 2 2 2 TNFR/NGFR cysteine-rich region Opy2 PF09463.10 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.0083 16.4 15.8 0.096 13.0 4.5 2.5 2 0 0 2 2 2 2 Opy2 protein Ephrin_rec_like PF07699.13 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.027 14.2 15.1 0.54 10.1 1.8 2.6 1 1 1 2 2 2 0 Putative ephrin-receptor like Lustrin_cystein PF14625.6 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.13 12.7 14.0 1.5 9.2 4.8 2.6 1 1 1 2 2 2 0 Lustrin, cysteine-rich repeated domain Dickkopf_N PF04706.12 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 0.46 11.0 6.9 6.5 7.3 0.9 2.7 1 1 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region MSC PF09402.10 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 1.2 8.5 4.6 1.4 8.3 4.6 1.1 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain zf-MYND PF01753.18 NODE_66480_length_240_cov_2.029268_g58539_i0reverse_frame_2 - 1.6 8.9 9.0 1.3 9.2 0.9 2.3 2 0 0 2 2 2 0 MYND finger PH_13 PF16652.5 NODE_66480_length_240_cov_2.029268_g58539_i0forward_frame_2 - 0.091 12.6 2.4 0.11 12.4 2.4 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain UPA PF17217.3 NODE_66478_length_240_cov_2.053659_g58537_i0forward_frame_2 - 0.077 12.9 0.1 0.089 12.7 0.1 1.1 1 0 0 1 1 1 0 UPA domain CRM1_C PF08767.11 NODE_66477_length_240_cov_2.053659_g58536_i0reverse_frame_2 - 0.033 13.3 0.4 0.035 13.3 0.4 1.0 1 0 0 1 1 1 0 CRM1 C terminal CT47 PF15623.6 NODE_66473_length_240_cov_2.107317_g58532_i0forward_frame_2 - 0.18 11.6 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Cancer/testis gene family 47 SCO1-SenC PF02630.14 NODE_66472_length_240_cov_2.121951_g58531_i0forward_frame_2 - 0.18 11.7 0.0 0.23 11.4 0.0 1.1 1 0 0 1 1 1 0 SCO1/SenC DHR10 PF18595.1 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.0026 17.8 9.3 0.011 15.7 9.3 1.8 1 1 0 1 1 1 1 Designed helical repeat protein 10 domain DUF1524 PF07510.11 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.039 13.8 5.2 0.044 13.7 5.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1524) DUF16 PF01519.16 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.057 13.9 5.6 0.06 13.8 5.6 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF16 DUF1690 PF07956.11 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.087 13.2 7.1 0.1 13.0 7.1 1.0 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) Wtap PF17098.5 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.11 12.4 8.0 0.084 12.8 5.0 1.8 1 1 1 2 2 2 0 WTAP/Mum2p family Musclin PF11037.8 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.29 11.1 3.2 0.35 10.8 3.2 1.1 1 0 0 1 1 1 0 Insulin-resistance promoting peptide in skeletal muscle TMPIT PF07851.13 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 0.54 9.5 3.9 0.58 9.4 3.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein V_ATPase_I PF01496.19 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 1 7.2 4.4 1 7.2 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Atg14 PF10186.9 NODE_66471_length_240_cov_2.126829_g58530_i0reverse_frame_3 - 1.9 7.5 8.4 2 7.4 8.4 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 RVT_1 PF00078.27 NODE_66466_length_240_cov_2.190244_g58525_i0forward_frame_3 - 6.1e-05 22.6 0.0 6.4e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF223 PF02721.14 NODE_66465_length_240_cov_2.200000_g58524_i0forward_frame_3 - 0.016 15.5 0.1 0.02 15.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF223 RALF PF05498.11 NODE_66465_length_240_cov_2.200000_g58524_i0forward_frame_2 - 0.076 14.0 0.0 0.095 13.7 0.0 1.2 1 0 0 1 1 1 0 Rapid ALkalinization Factor (RALF) DUF1435 PF07256.12 NODE_66464_length_240_cov_2.204878_g58523_i0reverse_frame_2 - 0.14 12.3 0.4 0.14 12.3 0.4 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1435) Tenui_NCP PF04876.12 NODE_66464_length_240_cov_2.204878_g58523_i0forward_frame_2 - 0.02 14.5 0.8 0.025 14.1 0.7 1.3 1 1 0 1 1 1 0 Tenuivirus major non-capsid protein HisG_C PF08029.11 NODE_66462_length_240_cov_2.214634_g58521_i0forward_frame_3 - 0.092 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 HisG, C-terminal domain zf-trcl PF13451.6 NODE_66458_length_240_cov_2.263415_g58517_i0reverse_frame_2 - 0.076 12.9 0.0 0.22 11.4 0.0 1.8 2 0 0 2 2 2 0 Probable zinc-ribbon domain Oxidored-like PF09791.9 NODE_66456_length_240_cov_2.297561_g58515_i0reverse_frame_2 - 0.0028 17.3 1.2 0.0044 16.6 1.2 1.3 1 0 0 1 1 1 1 Oxidoreductase-like protein, N-terminal zf-BED PF02892.15 NODE_66455_length_240_cov_2.312195_g58514_i0forward_frame_2 - 0.065 13.3 1.0 0.1 12.7 0.8 1.5 1 1 0 1 1 1 0 BED zinc finger Vps35 PF03635.17 NODE_66452_length_240_cov_2.375610_g58511_i0forward_frame_3 - 6e-26 91.2 1.3 6.4e-26 91.1 1.3 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 IL34 PF15036.6 NODE_66452_length_240_cov_2.375610_g58511_i0forward_frame_3 - 0.12 12.4 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 Interleukin 34 Glyco_hydro_62 PF03664.13 NODE_66451_length_240_cov_2.429268_g58510_i0reverse_frame_3 - 0.032 13.5 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 62 Zip PF02535.22 NODE_66451_length_240_cov_2.429268_g58510_i0reverse_frame_3 - 0.071 12.3 0.0 0.078 12.2 0.0 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter F-box PF00646.33 NODE_66451_length_240_cov_2.429268_g58510_i0reverse_frame_3 - 0.21 11.5 2.9 0.36 10.8 2.5 1.7 2 0 0 2 2 2 0 F-box domain Lep_receptor_Ig PF06328.11 NODE_66451_length_240_cov_2.429268_g58510_i0reverse_frame_2 - 0.059 13.3 0.5 0.07 13.1 0.5 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain DUF5562 PF17717.1 NODE_66450_length_240_cov_2.463415_g58509_i0forward_frame_3 - 0.14 12.2 0.3 0.17 11.8 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5562) MR_MLE_C PF13378.6 NODE_66448_length_240_cov_2.560976_g58507_i0reverse_frame_3 - 1.5e-11 44.3 0.1 1.5e-11 44.3 0.1 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like MORN PF02493.20 NODE_66445_length_240_cov_2.751220_g58504_i0reverse_frame_3 - 3e-13 48.8 14.0 1.3e-06 27.9 1.2 3.5 4 0 0 4 4 4 2 MORN repeat Tudor_2 PF18104.1 NODE_66445_length_240_cov_2.751220_g58504_i0reverse_frame_3 - 2.2 8.0 6.8 4.2 7.1 0.5 2.7 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain Paz_1 PF18349.1 NODE_66444_length_240_cov_2.751220_g58503_i0reverse_frame_2 - 0.14 12.1 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 PAZ domain FlxA PF14282.6 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.0043 17.0 5.0 0.0054 16.7 5.0 1.1 1 0 0 1 1 1 1 FlxA-like protein DUF4446 PF14584.6 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.025 14.6 1.7 0.026 14.5 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) ETRAMP PF09716.10 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.047 13.7 4.4 0.064 13.3 4.4 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DivIC PF04977.15 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.12 12.1 5.9 0.23 11.2 5.9 1.6 1 1 0 1 1 1 0 Septum formation initiator AI-2E_transport PF01594.16 NODE_66443_length_240_cov_2.760976_g58502_i0reverse_frame_3 - 0.14 11.3 0.3 0.16 11.1 0.3 1.0 1 0 0 1 1 1 0 AI-2E family transporter DUF4829 PF16111.5 NODE_66441_length_240_cov_2.790244_g58500_i0reverse_frame_2 - 0.18 12.6 2.6 0.21 12.4 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4829) 7TM_GPCR_Srsx PF10320.9 NODE_66440_length_240_cov_2.809756_g58499_i0reverse_frame_3 - 0.014 14.8 0.7 0.016 14.6 0.7 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srsx zf-piccolo PF05715.13 NODE_66440_length_240_cov_2.809756_g58499_i0reverse_frame_3 - 0.32 11.2 7.1 0.23 11.6 5.4 1.6 1 1 1 2 2 2 0 Piccolo Zn-finger DUF325 PF03804.13 NODE_66440_length_240_cov_2.809756_g58499_i0forward_frame_2 - 0.34 11.0 1.2 4.2 7.5 0.3 2.1 1 1 0 2 2 2 0 Viral proteins of unknown function HATPase_c PF02518.26 NODE_66439_length_240_cov_2.878049_g58498_i0forward_frame_2 - 2.2e-07 31.4 0.1 2.4e-07 31.2 0.1 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAPT PF11770.8 NODE_66438_length_240_cov_2.902439_g58497_i0forward_frame_2 - 0.059 13.2 0.6 0.065 13.1 0.6 1.1 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) DUF1187 PF06688.11 NODE_66436_length_240_cov_3.278049_g58495_i0forward_frame_2 - 0.095 13.1 0.2 0.21 11.9 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1187) ASFV_L11L PF05293.11 NODE_66435_length_240_cov_3.356098_g58494_i0reverse_frame_2 - 0.16 12.3 1.8 13 6.2 0.1 2.2 1 1 1 2 2 2 0 African swine fever virus (ASFV) L11L protein PTPA PF03095.15 NODE_66435_length_240_cov_3.356098_g58494_i0forward_frame_2 - 3.2e-24 85.9 1.2 3.3e-24 85.9 1.2 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein DUF4164 PF13747.6 NODE_66434_length_240_cov_3.478049_g58493_i0reverse_frame_3 - 0.033 14.5 1.7 0.041 14.1 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Perm-CXXC PF15629.6 NODE_66434_length_240_cov_3.478049_g58493_i0forward_frame_3 - 5.4 7.4 7.1 1.3 9.3 0.7 2.6 3 0 0 3 3 3 0 Permuted single zf-CXXC unit T4_neck-protein PF11649.8 NODE_66433_length_240_cov_3.780488_g58492_i0reverse_frame_3 - 0.023 14.0 0.0 0.026 13.9 0.0 1.0 1 0 0 1 1 1 0 Virus neck protein Herpes_U15 PF05613.11 NODE_66428_length_240_cov_6.795122_g58487_i0forward_frame_3 - 0.016 15.9 0.0 0.018 15.7 0.0 1.1 1 0 0 1 1 1 0 Human herpesvirus U15 protein SPT_ssu-like PF11779.8 NODE_66425_length_240_cov_17.775610_g58484_i0forward_frame_2 - 0.026 14.1 0.8 0.026 14.1 0.8 1.8 1 1 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like Herpes_LMP1 PF05297.11 NODE_66425_length_240_cov_17.775610_g58484_i0forward_frame_2 - 2.3 7.3 3.9 2.4 7.3 3.9 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) ParA PF10609.9 NODE_66423_length_240_cov_28.965854_g58482_i0reverse_frame_3 - 0.11 11.9 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase zinc_ribbon_11 PF11682.8 NODE_66423_length_240_cov_28.965854_g58482_i0forward_frame_3 - 0.024 14.7 0.1 0.034 14.2 0.1 1.2 1 0 0 1 1 1 0 Probable zinc-ribbon TonB_N PF16031.5 NODE_66422_length_240_cov_29.936585_g58481_i0reverse_frame_3 - 4.1 7.9 29.4 7.1 7.2 29.4 1.4 1 1 0 1 1 1 0 TonB polyproline region Serglycin PF04360.12 NODE_66422_length_240_cov_29.936585_g58481_i0forward_frame_3 - 0.034 14.1 0.5 0.04 13.9 0.5 1.1 1 0 0 1 1 1 0 Serglycin Med12-PQL PF12144.8 NODE_66421_length_240_cov_30.980488_g58480_i0forward_frame_2 - 0.11 12.3 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic Mediator 12 catenin-binding domain PH_17 PF18012.1 NODE_66418_length_240_cov_32.707317_g58477_i0forward_frame_2 - 0.042 13.6 0.1 0.069 12.9 0.1 1.4 1 0 0 1 1 1 0 PH domain Gene66 PF02053.15 NODE_66417_length_240_cov_32.829268_g58476_i0reverse_frame_3 - 1.1 8.9 8.1 1.3 8.6 8.1 1.0 1 0 0 1 1 1 0 Gene 66 (IR5) protein PKD_channel PF08016.12 NODE_66417_length_240_cov_32.829268_g58476_i0forward_frame_3 - 1.1 7.9 5.6 1.3 7.6 5.6 1.0 1 0 0 1 1 1 0 Polycystin cation channel PAXNEB PF05625.11 NODE_66410_length_240_cov_41.321951_g58469_i0forward_frame_3 - 0.17 11.0 0.3 0.18 10.9 0.3 1.0 1 0 0 1 1 1 0 PAXNEB protein DUF383 PF04063.14 NODE_66409_length_240_cov_43.404878_g58468_i0reverse_frame_2 - 0.022 14.4 0.1 0.025 14.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF383) SFTA2 PF15210.6 NODE_66408_length_240_cov_43.492683_g58467_i0forward_frame_3 - 0.07 13.1 0.8 0.07 13.1 0.8 2.1 1 1 1 2 2 2 0 Surfactant-associated protein 2 RPN5_C PF18098.1 NODE_66407_length_240_cov_43.517073_g58466_i0reverse_frame_2 - 0.42 10.8 2.9 1.1 9.4 2.9 1.7 1 1 0 1 1 1 0 26S proteasome regulatory subunit RPN5 C-terminal domain Herpes_capsid PF06112.11 NODE_66406_length_240_cov_47.580488_g58465_i0forward_frame_2 - 1.9 8.6 5.8 2.2 8.3 5.8 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein S-antigen PF05756.11 NODE_66404_length_240_cov_49.424390_g58463_i0reverse_frame_3 - 5.3 7.5 7.9 1.2 9.6 4.5 1.6 1 1 1 2 2 2 0 S-antigen protein BCMA-Tall_bind PF09257.10 NODE_66404_length_240_cov_49.424390_g58463_i0reverse_frame_2 - 0.044 13.9 1.1 0.044 13.9 1.1 1.7 2 0 0 2 2 2 0 BCMA, TALL-1 binding NodS PF05401.11 NODE_66404_length_240_cov_49.424390_g58463_i0forward_frame_3 - 0.036 13.7 0.1 0.038 13.6 0.1 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) Rubi_NSP_C PF12601.8 NODE_66403_length_240_cov_49.970732_g58462_i0reverse_frame_3 - 0.1 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Rubivirus non-structural protein VP_N-CPKC PF11475.8 NODE_66403_length_240_cov_49.970732_g58462_i0forward_frame_3 - 0.054 13.4 2.8 0.089 12.7 2.8 1.4 1 0 0 1 1 1 0 Virion protein N terminal domain DDE_2 PF02914.15 NODE_66401_length_240_cov_50.790244_g58460_i0forward_frame_2 - 0.03 14.1 0.1 0.035 13.8 0.1 1.0 1 0 0 1 1 1 0 Bacteriophage Mu transposase DUF4060 PF13269.6 NODE_66401_length_240_cov_50.790244_g58460_i0forward_frame_2 - 0.065 13.3 0.1 0.086 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4060) WavE PF07507.11 NODE_66399_length_240_cov_53.043902_g58458_i0reverse_frame_2 - 0.037 13.2 0.1 0.037 13.2 0.1 1.0 1 0 0 1 1 1 0 WavE lipopolysaccharide synthesis DUF5087 PF17006.5 NODE_66396_length_240_cov_54.000000_g58455_i0reverse_frame_3 - 0.0081 15.7 0.7 0.0081 15.7 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5087) GP41 PF00517.17 NODE_66395_length_240_cov_57.200000_g58454_i0forward_frame_3 - 0.029 14.3 2.0 0.033 14.1 2.0 1.1 1 0 0 1 1 1 0 Retroviral envelope protein PRIMA1 PF16101.5 NODE_66395_length_240_cov_57.200000_g58454_i0forward_frame_3 - 2.3 8.3 9.2 0.85 9.7 5.7 2.0 1 1 1 2 2 2 0 Proline-rich membrane anchor 1 CBFD_NFYB_HMF PF00808.23 NODE_66393_length_240_cov_60.297561_g58452_i0forward_frame_2 - 0.0051 17.1 0.1 0.0079 16.5 0.1 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone DUF3488 PF11992.8 NODE_66391_length_240_cov_68.682927_g58450_i0forward_frame_2 - 0.037 13.0 7.4 0.042 12.8 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF2781 PF10914.8 NODE_66391_length_240_cov_68.682927_g58450_i0forward_frame_2 - 2.4 8.5 13.0 2.8 8.4 13.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) DUF4711 PF15829.5 NODE_66389_length_240_cov_70.565854_g58448_i0forward_frame_2 - 0.98 9.3 3.4 1.1 9.1 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4711) Porin_7 PF16956.5 NODE_66388_length_240_cov_75.702439_g58447_i0reverse_frame_3 - 0.11 12.1 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative general bacterial porin U83 PF17465.2 NODE_66388_length_240_cov_75.702439_g58447_i0forward_frame_2 - 2.7 8.2 6.5 0.32 11.1 1.5 1.8 1 1 1 2 2 2 0 Chemokine-like protein, HHV-6 U83 gene product DUF2644 PF10841.8 NODE_66384_length_240_cov_79.409756_g58443_i0reverse_frame_2 - 0.019 15.2 0.6 0.034 14.4 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) DUF2663 PF10864.8 NODE_66384_length_240_cov_79.409756_g58443_i0reverse_frame_2 - 0.026 14.9 1.1 0.031 14.7 1.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) FeS PF04060.13 NODE_66384_length_240_cov_79.409756_g58443_i0reverse_frame_2 - 0.052 13.2 0.2 0.08 12.6 0.2 1.3 1 0 0 1 1 1 0 Putative Fe-S cluster Chi-conotoxin PF16981.5 NODE_66384_length_240_cov_79.409756_g58443_i0forward_frame_3 - 0.025 14.8 1.0 0.044 14.0 1.0 1.4 1 0 0 1 1 1 0 chi-Conotoxin or t superfamily DUF3232 PF11554.8 NODE_66384_length_240_cov_79.409756_g58443_i0forward_frame_3 - 0.12 12.8 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) FAD_binding_1 PF00667.20 NODE_66384_length_240_cov_79.409756_g58443_i0forward_frame_3 - 0.13 11.8 0.1 0.15 11.6 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain Colipase PF01114.18 NODE_66383_length_240_cov_81.604878_g58442_i0forward_frame_3 - 0.11 12.2 0.6 0.22 11.2 0.1 1.7 2 0 0 2 2 2 0 Colipase, N-terminal domain DUF1467 PF07330.12 NODE_66382_length_240_cov_84.570732_g58441_i0reverse_frame_2 - 0.28 11.2 4.3 0.16 11.9 2.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1467) NR_Repeat PF14046.6 NODE_66381_length_240_cov_88.800000_g58440_i0reverse_frame_3 - 0.0098 16.0 0.1 0.014 15.5 0.1 1.2 1 0 0 1 1 1 1 Nuclear receptor repeat Toxin_16 PF07945.11 NODE_66378_length_240_cov_101.068293_g58437_i0forward_frame_3 - 0.57 10.1 5.9 1.1 9.2 5.9 1.4 1 0 0 1 1 1 0 Janus-atracotoxin YqjK PF13997.6 NODE_66371_length_240_cov_120.429268_g58430_i0forward_frame_3 - 0.073 13.3 0.1 0.095 13.0 0.1 1.2 1 0 0 1 1 1 0 YqjK-like protein Neuraminidase PF18413.1 NODE_66370_length_240_cov_127.239024_g58429_i0reverse_frame_2 - 0.048 13.3 0.7 0.065 12.9 0.7 1.2 1 0 0 1 1 1 0 Neuraminidase-like domain MORN PF02493.20 NODE_66370_length_240_cov_127.239024_g58429_i0forward_frame_2 - 0.00032 20.4 1.5 0.00032 20.4 1.5 1.8 2 0 0 2 2 2 1 MORN repeat Phage_holin_3_6 PF07332.11 NODE_66367_length_240_cov_141.560976_g58426_i0forward_frame_3 - 0.57 10.2 6.8 0.6 10.2 6.8 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cys_rich_CWC PF14375.6 NODE_66365_length_240_cov_149.458537_g58424_i0reverse_frame_2 - 0.099 13.1 6.8 8.6 6.9 6.8 2.1 1 1 0 1 1 1 0 Cysteine-rich CWC Peroxidase_ext PF11895.8 NODE_66365_length_240_cov_149.458537_g58424_i0reverse_frame_2 - 0.14 12.1 1.0 0.2 11.6 1.0 1.4 1 1 0 1 1 1 0 Fungal peroxidase extension region AAA_lid_10 PF17872.1 NODE_66363_length_240_cov_158.492683_g58422_i0reverse_frame_2 - 0.012 15.7 0.2 0.013 15.6 0.2 1.1 1 0 0 1 1 1 0 AAA lid domain GCR PF02155.15 ORF99878 - 0.047 12.7 0.0 0.047 12.7 0.0 1.1 1 0 0 1 1 1 0 Glucocorticoid receptor BspA_v PF18220.1 ORF99575 - 0.058 13.5 0.3 0.062 13.4 0.3 1.2 1 0 0 1 1 1 0 Adhesin BspA variable domain MapZ_EC1 PF18041.1 ORF99328 - 0.0068 16.6 0.4 2.5 8.4 0.1 2.0 1 1 1 2 2 2 2 MapZ extracellular domain 1 HHV-1_VABD PF16852.5 ORF99289 - 0.044 13.8 5.7 0.044 13.8 5.7 1.8 2 0 0 2 2 2 0 Herpes viral adaptor-to-host cellular mRNA binding domain DUF485 PF04341.12 ORF98606 - 0.47 10.4 9.9 0.57 10.2 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF805 PF05656.14 ORF98606 - 1 9.8 8.4 1.3 9.5 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF805) Enkurin PF13864.6 ORF98271 - 1.8e-18 66.7 3.6 2e-18 66.6 3.6 1.0 1 0 0 1 1 1 1 Calmodulin-binding DUF2284 PF10050.9 ORF98271 - 0.086 12.6 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) NuA4 PF09340.10 ORF98271 - 0.22 11.4 4.5 1.7 8.6 0.2 2.1 1 1 1 2 2 2 0 Histone acetyltransferase subunit NuA4 RbcS PF12338.8 ORF9802 - 0.075 13.2 1.6 11 6.3 0.1 2.4 2 1 0 2 2 2 0 Ribulose-1,5-bisphosphate carboxylase small subunit zf-CCCH_7 PF18586.1 ORF98007 - 0.043 14.2 0.2 0.05 13.9 0.2 1.1 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 DPBB_1 PF03330.18 ORF97902 - 0.089 13.1 0.8 0.13 12.6 0.8 1.4 1 1 0 1 1 1 0 Lytic transglycolase DUF267 PF03268.14 ORF97801 - 0.039 12.8 0.0 0.044 12.6 0.0 1.0 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF267 PPR PF01535.20 ORF97711 - 0.064 13.5 1.9 0.77 10.1 0.1 2.5 2 0 0 2 2 2 0 PPR repeat Lipid_DES PF08557.10 ORF97607 - 1.8 8.2 5.0 0.46 10.0 0.4 2.2 2 0 0 2 2 2 0 Sphingolipid Delta4-desaturase (DES) PBP_like PF12727.7 ORF97601 - 0.22 10.6 0.0 0.25 10.4 0.0 1.1 1 0 0 1 1 1 0 PBP superfamily domain DUF485 PF04341.12 ORF96595 - 0.47 10.4 9.9 0.57 10.2 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF805 PF05656.14 ORF96595 - 1 9.8 8.4 1.3 9.5 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF805) CH_2 PF06294.11 ORF96566 - 2.6e-26 91.6 0.3 2.9e-26 91.4 0.3 1.0 1 0 0 1 1 1 1 CH-like domain in sperm protein CAMSAP_CH PF11971.8 ORF96566 - 5.4e-13 48.6 0.0 6.2e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 CAMSAP CH domain CH PF00307.31 ORF96566 - 0.01 16.0 0.0 0.014 15.6 0.0 1.2 1 0 0 1 1 1 0 Calponin homology (CH) domain FGAR-AT_linker PF18072.1 ORF96566 - 0.073 13.6 0.0 1.7 9.3 0.0 2.1 1 1 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase linker domain BHD_2 PF10404.9 ORF96106 - 0.51 11.3 0.1 0.51 11.3 0.1 2.5 1 1 2 3 3 3 0 Rad4 beta-hairpin domain 2 ADP_ribosyl_GH PF03747.14 ORF96006 - 1.3e-10 41.6 0.5 1.5e-10 41.3 0.5 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase zf-3CxxC_2 PF17180.4 ORF95947 - 0.1 13.4 4.8 0.23 12.2 4.9 1.6 1 1 0 1 1 1 0 Zinc-binding domain Ndc1_Nup PF09531.10 ORF95506 - 0.38 9.4 6.9 0.39 9.3 6.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup CBM_10 PF02013.16 ORF94685 - 0.57 10.7 4.5 2 9.0 0.2 2.4 2 0 0 2 2 2 0 Cellulose or protein binding domain zf-C3Hc3H PF13891.6 ORF94168 - 0.21 12.0 2.9 0.7 10.3 0.4 2.1 2 0 0 2 2 2 0 Potential DNA-binding domain DUF4687 PF15747.5 ORF94100 - 0.067 13.7 0.1 0.076 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4687) DUF1308 PF07000.11 ORF94041 - 0.11 12.4 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1308) Lipid_DES PF08557.10 ORF93971 - 1.8 8.2 5.0 0.46 10.0 0.4 2.2 2 0 0 2 2 2 0 Sphingolipid Delta4-desaturase (DES) Orf78 PF06024.12 ORF93800 - 0.016 15.5 1.6 0.026 14.8 1.6 1.3 1 0 0 1 1 1 0 Orf78 (ac78) DUF3139 PF11337.8 ORF93800 - 0.019 15.6 1.2 0.022 15.4 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) Sperm_Ag_HE2 PF05324.13 ORF93432 - 0.16 12.5 1.1 0.23 11.9 1.1 1.2 1 0 0 1 1 1 0 Sperm antigen HE2 DUF3810 PF12725.7 ORF92486 - 1 8.7 3.4 1.1 8.5 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Phospholamban PF04272.14 ORF92486 - 2.1 7.9 7.2 0.42 10.1 2.6 1.9 2 0 0 2 2 2 0 Phospholamban DUF1810 PF08837.11 ORF91630 - 0.041 13.7 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1810) DUF2534 PF10749.9 ORF91630 - 0.055 13.6 0.0 0.12 12.5 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2534) CTP-dep_RFKase PF01982.16 ORF91630 - 0.062 13.4 0.1 0.073 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF120 zf-UDP PF14569.6 ORF91137 - 0.13 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Zinc-binding RING-finger DUF3011 PF11218.8 ORF9013 - 0.011 15.7 0.2 0.014 15.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3011) Cys_rich_CPCC PF14206.6 ORF89462 - 0.0084 15.9 0.3 0.014 15.2 0.3 1.3 1 0 0 1 1 1 1 Cysteine-rich CPCC DUF1815 PF08844.10 ORF89462 - 0.0099 15.8 0.2 0.012 15.6 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1815) Chs7 PF12271.8 ORF89323 - 0.0044 16.4 1.8 0.0047 16.3 1.8 1.0 1 0 0 1 1 1 1 Chitin synthase export chaperone CD225 PF04505.12 ORF89276 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein TB PF00683.17 ORF8885 - 0.53 10.1 10.1 4.3 7.2 4.2 2.2 2 0 0 2 2 2 0 TB domain DUF4863 PF16155.5 ORF88718 - 0.21 11.4 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4863) ErmC PF06308.11 ORF88194 - 0.012 16.0 1.9 0.031 14.6 1.9 1.7 1 0 0 1 1 1 0 23S rRNA methylastransferase leader peptide (ErmCL) DUF16 PF01519.16 ORF88194 - 0.26 11.8 5.9 0.52 10.8 5.9 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 Alg14 PF08660.11 ORF88025 - 0.1 12.5 1.6 0.11 12.5 1.6 1.0 1 0 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like T6SS_VasJ PF16989.5 ORF87998 - 0.0016 18.0 0.1 0.0019 17.8 0.1 1.0 1 0 0 1 1 1 1 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ EBV-NA1 PF02905.14 ORF87217 - 0.065 13.1 0.1 0.07 12.9 0.1 1.1 1 0 0 1 1 1 0 Epstein Barr virus nuclear antigen-1, DNA-binding domain DUF2855 PF11017.8 ORF86858 - 0.21 11.3 0.1 0.21 11.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) RRXRR PF14239.6 ORF86805 - 0.07 13.0 0.0 0.074 12.9 0.0 1.1 1 0 0 1 1 1 0 RRXRR protein FYVE_2 PF02318.16 ORF86650 - 0.026 14.7 2.9 0.028 14.6 2.9 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger Peptidase_C74 PF12387.8 ORF86604 - 0.11 12.0 0.5 0.1 12.1 0.5 1.2 1 0 0 1 1 1 0 Pestivirus NS2 peptidase Reo_sigmaC_M PF17750.1 ORF86582 - 0.035 14.0 1.7 0.087 12.7 1.7 1.7 1 0 0 1 1 1 0 Reovirus sigma C capsid protein triple beta spiral FACT-Spt16_Nlob PF14826.6 ORF86582 - 0.048 13.5 0.1 0.065 13.0 0.1 1.2 1 0 0 1 1 1 0 FACT complex subunit SPT16 N-terminal lobe domain DsbB PF02600.16 ORF85978 - 0.03 14.7 0.2 0.037 14.5 0.2 1.2 1 0 0 1 1 1 0 Disulfide bond formation protein DsbB zf-UDP PF14569.6 ORF85978 - 0.094 12.8 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Zinc-binding RING-finger DUF485 PF04341.12 ORF85536 - 0.47 10.4 9.9 0.57 10.2 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF805 PF05656.14 ORF85536 - 1 9.8 8.4 1.3 9.5 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF805) DUF72 PF01904.18 ORF85151 - 0.023 14.8 0.3 0.023 14.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF72 DUF1218 PF06749.12 ORF8481 - 0.33 11.5 5.6 0.12 12.9 1.2 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1218) Ribosomal_L37e PF01907.19 ORF84538 - 0.18 12.0 0.4 0.18 12.0 0.4 2.1 1 1 1 2 2 2 0 Ribosomal protein L37e ACAS_N PF16177.5 ORF83891 - 0.11 12.5 0.1 0.17 11.8 0.0 1.4 2 0 0 2 2 2 0 Acetyl-coenzyme A synthetase N-terminus DUF3927 PF13064.6 ORF83376 - 0.32 11.0 3.8 10 6.2 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3927) Ribosomal_L38e PF01781.18 ORF83045 - 1.2e-20 73.4 3.2 1.4e-20 73.2 3.2 1.0 1 0 0 1 1 1 1 Ribosomal L38e protein family Zn_ribbon_17 PF17120.5 ORF82908 - 0.026 14.2 2.7 0.033 13.8 2.7 1.1 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type DUF3270 PF11674.8 ORF82065 - 0.059 13.5 3.4 0.081 13.1 3.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) iPGM_N PF06415.13 ORF81353 - 0.027 14.0 0.7 0.029 13.8 0.7 1.0 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) DnaB_bind PF10410.9 ORF81353 - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase DEAD_2 PF06733.15 ORF80847 - 0.0062 16.2 0.0 0.0067 16.1 0.0 1.2 1 0 0 1 1 1 1 DEAD_2 Zn_dep_PLPC PF00882.18 ORF80317 - 0.041 13.9 0.1 0.041 13.9 0.1 1.1 1 0 0 1 1 1 0 Zinc dependent phospholipase C zf-C3HC4_2 PF13923.6 ORF79475 - 0.073 12.9 0.9 0.31 10.9 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) CAGE1 PF15066.6 ORF79282 - 0.016 14.0 0.8 0.018 13.7 0.8 1.0 1 0 0 1 1 1 0 Cancer-associated gene protein 1 family YabA PF06156.13 ORF79282 - 0.021 15.5 0.1 0.021 15.5 0.1 1.5 2 0 0 2 2 2 0 Initiation control protein YabA TSNAXIP1_N PF15739.5 ORF79282 - 0.067 13.6 0.3 0.093 13.1 0.3 1.3 1 1 0 1 1 1 0 Translin-associated factor X-interacting N-terminus Arteri_nucleo PF01481.16 ORF79196 - 0.17 12.2 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 Arterivirus nucleocapsid protein DUF2794 PF10984.8 ORF78645 - 0.052 13.7 0.2 2.3 8.4 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2794) DUF1161 PF06649.12 ORF77726 - 0.071 13.3 0.2 0.15 12.3 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1161) Luciferase_N PF05295.11 ORF7728 - 0.039 14.0 0.4 0.66 10.0 0.4 2.1 1 1 0 1 1 1 0 Luciferase/LBP N-terminal domain Peptidase_C74 PF12387.8 ORF77201 - 0.11 12.0 0.5 0.1 12.1 0.5 1.2 1 0 0 1 1 1 0 Pestivirus NS2 peptidase Phage-tail_3 PF13550.6 ORF76510 - 0.032 14.1 0.1 0.034 14.0 0.1 1.1 1 0 0 1 1 1 0 Putative phage tail protein ACOX PF01756.19 ORF75956 - 0.00074 19.1 0.2 0.00086 18.9 0.2 1.1 1 0 0 1 1 1 1 Acyl-CoA oxidase FixQ PF05545.11 ORF75859 - 0.061 13.3 1.1 0.14 12.1 1.1 1.6 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF21 PF01595.20 ORF75859 - 0.087 12.5 0.3 0.087 12.5 0.3 1.8 1 1 1 2 2 2 0 Cyclin M transmembrane N-terminal domain Glycos_trans_3N PF02885.17 ORF75859 - 0.16 11.8 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain DUF4392 PF14336.6 ORF75565 - 0.36 10.2 0.7 0.39 10.1 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4392) NS3_envE PF02723.14 ORF75565 - 1.7 8.8 12.9 1.2 9.3 11.6 1.6 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E DUF4633 PF15464.6 ORF74672 - 0.085 13.0 4.3 0.12 12.6 3.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4633) Transcript_VP30 PF11507.8 ORF73430 - 0.15 12.1 0.4 0.19 11.8 0.4 1.1 1 0 0 1 1 1 0 Ebola virus-specific transcription factor VP30 DUF346 PF03984.13 ORF72134 - 0.12 12.1 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 Repeat of unknown function (DUF346) DUF5084 PF16894.5 ORF72119 - 0.064 13.7 1.6 0.3 11.5 1.6 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF5084) Oxidored_q5_N PF01059.17 ORF72119 - 0.097 12.8 2.3 0.1 12.7 2.3 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Cys_box PF17869.1 ORF71776 - 0.024 14.8 0.8 0.024 14.8 0.8 1.8 1 1 1 2 2 2 0 Anosmin cysteine rich domain DUF4863 PF16155.5 ORF71488 - 0.21 11.4 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4863) PhdYeFM_antitox PF02604.19 ORF71143 - 0.041 13.7 1.0 0.17 11.7 1.0 1.8 1 1 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Yeast_MT PF11403.8 ORF70705 - 6.1 7.5 11.9 0.28 11.8 3.6 2.1 2 0 0 2 2 2 0 Yeast metallothionein DUF2576 PF10845.8 ORF7041 - 0.13 11.9 0.3 0.22 11.1 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) DUF4674 PF15719.5 ORF69959 - 0.01 15.9 0.1 0.013 15.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4674) Spy1 PF11357.8 ORF68918 - 0.1 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Cell cycle regulatory protein TDA11 PF17084.5 ORF68830 - 0.16 10.9 0.0 0.17 10.8 0.0 1.0 1 0 0 1 1 1 0 Topoisomerase I damage affected protein 11 PRIMA1 PF16101.5 ORF68747 - 0.046 13.7 1.8 0.053 13.6 1.8 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CD225 PF04505.12 ORF68594 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein BaffR-Tall_bind PF09256.10 ORF6684 - 8.5 6.2 9.6 1.2 8.9 0.5 2.8 3 0 0 3 3 3 0 BAFF-R, TALL-1 binding CPP1-like PF11833.8 ORF66707 - 0.18 11.5 0.5 0.21 11.3 0.5 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Sterol-sensing PF12349.8 ORF66562 - 0.26 11.1 10.1 0.32 10.8 10.1 1.2 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation DUF3613 PF12266.8 ORF66394 - 0.048 13.5 0.4 0.066 13.0 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3613) Imm58 PF15581.6 ORF64832 - 0.011 15.8 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 58 SMC_N PF02463.19 ORF64832 - 0.076 12.4 0.8 0.092 12.2 0.8 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Imm58 PF15581.6 ORF64762 - 0.011 15.8 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 58 SMC_N PF02463.19 ORF64762 - 0.076 12.4 0.8 0.092 12.2 0.8 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain U71 PF17474.2 ORF64681 - 0.067 13.1 3.1 4.6 7.3 0.1 2.3 2 0 0 2 2 2 0 Tegument protein UL11 homolog Sars6 PF12133.8 ORF63991 - 0.0087 16.0 0.0 0.013 15.4 0.0 1.3 1 0 0 1 1 1 1 Open reading frame 6 from SARS coronavirus Corazonin PF17308.2 ORF63892 - 0.028 14.8 0.1 0.031 14.6 0.1 1.1 1 0 0 1 1 1 0 Pro-corazonin DUF3805 PF12712.7 ORF62798 - 0.025 14.7 0.0 0.026 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3805) Pkinase PF00069.25 ORF62111 - 2e-06 27.4 0.1 2.4e-06 27.1 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain TFIIB PF00382.19 ORF62111 - 0.0087 16.1 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 Transcription factor TFIIB repeat Pkinase_Tyr PF07714.17 ORF62111 - 0.016 14.5 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase Ribosomal_L24e PF01246.20 ORF61882 - 0.18 12.1 1.6 0.46 10.7 0.2 2.0 1 1 1 2 2 2 0 Ribosomal protein L24e PapC_C PF13953.6 ORF61765 - 3.8e-24 84.3 0.1 4.5e-24 84.0 0.1 1.1 1 0 0 1 1 1 1 PapC C-terminal domain Gemini_AL1 PF00799.20 ORF61607 - 0.12 12.8 1.0 0.16 12.4 1.1 1.3 1 1 0 1 1 1 0 Geminivirus Rep catalytic domain Trimer_CC PF08954.11 ORF6150 - 0.034 13.7 1.6 0.18 11.4 1.6 2.0 1 1 0 1 1 1 0 Trimerisation motif HD_2 PF12917.7 ORF61371 - 0.1 12.3 9.1 0.13 12.0 9.1 1.0 1 0 0 1 1 1 0 HD containing hydrolase-like enzyme Pox_A_type_inc PF04508.12 ORF61371 - 0.33 10.9 4.5 2.3 8.2 0.2 3.4 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat DUF3584 PF12128.8 ORF61371 - 0.6 7.5 14.5 0.62 7.5 14.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) ZYG-11_interact PF05884.12 ORF61371 - 0.6 9.5 2.7 0.6 9.5 2.7 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 DUF4407 PF14362.6 ORF61371 - 0.77 9.1 10.2 0.84 8.9 10.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PNPase PF03726.14 ORF61371 - 1.4 9.4 10.6 1.8 9.1 10.6 1.3 1 1 0 1 1 1 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain DUF2407_C PF13373.6 ORF61371 - 1.4 9.0 4.5 1.6 8.9 4.5 1.1 1 0 0 1 1 1 0 DUF2407 C-terminal domain DUF4337 PF14235.6 ORF61371 - 2.6 8.2 16.1 2.8 8.1 16.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4554 PF15091.6 ORF61371 - 2.9 6.7 8.0 3.3 6.5 8.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) Phage_lysis PF03245.13 ORF61371 - 3.7 7.7 11.9 6.1 7.0 1.9 2.1 1 1 1 2 2 2 0 Bacteriophage Rz lysis protein VPS38 PF17649.1 ORF61371 - 6.3 5.5 13.7 6.3 5.6 13.7 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting 38 DivIC PF04977.15 ORF61371 - 9 6.2 14.3 44 3.9 14.3 2.2 1 1 0 1 1 1 0 Septum formation initiator DUF3450 PF11932.8 ORF61371 - 9.4 5.5 13.4 9.8 5.4 13.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) HNF-1_N PF04814.13 ORF61051 - 0.013 16.1 0.2 0.015 15.9 0.2 1.0 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus RNA_pol_3_Rpc31 PF11705.8 ORF60768 - 0.006 16.9 1.3 0.0078 16.5 1.3 1.1 1 0 0 1 1 1 1 DNA-directed RNA polymerase III subunit Rpc31 zf_CopZ PF18423.1 ORF5961 - 0.011 15.7 0.2 0.017 15.0 0.2 1.3 1 0 0 1 1 1 0 Zinc binding domain Myticin-prepro PF10690.9 ORF59438 - 0.11 12.7 3.0 0.13 12.6 3.0 1.2 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel CD225 PF04505.12 ORF58760 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein CotE PF10628.9 ORF58713 - 0.045 13.4 0.1 0.051 13.2 0.1 1.1 1 0 0 1 1 1 0 Outer spore coat protein E (CotE) oligo_HPY PF08352.12 ORF58640 - 0.018 15.6 0.1 0.024 15.2 0.1 1.4 1 1 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region ComS PF17584.2 ORF58304 - 0.33 10.5 4.4 0.37 10.3 3.6 1.5 1 1 0 1 1 1 0 Bacillus competence protein S STN PF07660.14 ORF58244 - 0.072 12.9 0.1 0.13 12.1 0.1 1.5 1 0 0 1 1 1 0 Secretin and TonB N terminus short domain DUF4799 PF16056.5 ORF58173 - 0.02 14.1 0.1 0.02 14.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4799) PapC_C PF13953.6 ORF57612 - 5.9e-27 93.3 0.0 7.6e-27 92.9 0.0 1.1 1 0 0 1 1 1 1 PapC C-terminal domain Fer4 PF00037.27 ORF57097 - 1.8 8.5 12.4 1 9.3 4.6 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Nodulin_late PF07127.11 ORF56266 - 0.054 13.8 0.2 0.081 13.3 0.2 1.3 1 0 0 1 1 1 0 Late nodulin protein DUF5383 PF17355.2 ORF5578 - 0.26 11.7 5.4 0.34 11.3 5.3 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5383) Phasin PF05597.11 ORF55742 - 0.037 14.0 0.0 0.039 14.0 0.0 1.1 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) YbaB_DNA_bd PF02575.16 ORF55584 - 0.0012 19.0 1.0 0.0015 18.7 1.0 1.2 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family ParB PF08775.10 ORF55584 - 0.089 13.3 3.0 0.096 13.2 3.0 1.1 1 0 0 1 1 1 0 ParB family FeThRed_B PF02943.15 ORF55121 - 0.47 10.5 4.5 1.4 9.0 4.5 1.7 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain YjcB PF15940.5 ORF55034 - 0.018 15.2 0.3 0.023 14.9 0.3 1.3 1 1 0 1 1 1 0 Family of unknown function NSP11 PF06471.12 ORF54879 - 0.14 10.6 1.0 0.14 10.6 1.0 1.0 1 0 0 1 1 1 0 NSP11 DUF4825 PF16107.5 ORF54867 - 0.086 13.0 1.5 0.097 12.8 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4825) FeThRed_B PF02943.15 ORF54535 - 0.47 10.5 4.5 1.4 9.0 4.5 1.7 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain BaffR-Tall_bind PF09256.10 ORF54482 - 8.5 6.2 9.6 1.2 8.9 0.5 2.8 3 0 0 3 3 3 0 BAFF-R, TALL-1 binding PCP_red PF08369.10 ORF5419 - 0.13 12.5 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 Proto-chlorophyllide reductase 57 kD subunit tRNA_synt_1c_R2 PF04557.15 ORF54116 - 0.14 13.1 4.4 0.17 12.9 4.4 1.1 1 0 0 1 1 1 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 p31comet PF06581.12 ORF53018 - 0.047 12.8 0.6 0.055 12.6 0.6 1.0 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding DUF2576 PF10845.8 ORF52865 - 0.13 11.9 0.3 0.22 11.1 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) Mustang PF15682.5 ORF52471 - 0.068 13.3 2.0 0.11 12.6 2.0 1.4 1 0 0 1 1 1 0 Musculoskeletal, temporally activated-embryonic nuclear protein 1 T-box_assoc PF16176.5 ORF52471 - 1.5 8.8 6.4 1.9 8.5 6.4 1.0 1 0 0 1 1 1 0 T-box transcription factor-associated DUF1908 PF08926.11 ORF52392 - 0.098 11.7 0.2 0.1 11.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) CDP-OH_P_tran_2 PF08009.11 ORF52170 - 0.085 12.8 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase 2 ErmC PF06308.11 ORF51915 - 0.012 16.0 1.9 0.031 14.6 1.9 1.7 1 0 0 1 1 1 0 23S rRNA methylastransferase leader peptide (ErmCL) DUF16 PF01519.16 ORF51915 - 0.26 11.8 5.9 0.52 10.8 5.9 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 DAP10 PF07213.11 ORF51214 - 0.0062 16.5 0.1 0.0075 16.2 0.1 1.1 1 0 0 1 1 1 1 DAP10 membrane protein KH_4 PF13083.6 ORF51214 - 0.026 14.4 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 KH domain DUF1389 PF07146.11 ORF51115 - 0.17 11.2 1.3 0.16 11.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1389) DUF2873 PF11395.8 ORF51115 - 1.9 8.4 8.0 0.17 11.8 2.6 2.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2873) CCD48 PF15799.5 ORF51047 - 0.043 12.1 2.6 0.046 12.0 2.6 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 Inhibitor_I29 PF08246.12 ORF51047 - 0.064 13.7 4.5 0.086 13.3 4.5 1.2 1 0 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) DUF3979 PF13141.6 ORF50517 - 0.054 13.8 0.0 0.063 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) INCA1 PF15142.6 ORF50505 - 0.12 12.4 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 INCA1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks341.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks341.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks341.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks341.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:17:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4825 PF16107.5 ORF50205 - 0.086 13.0 1.5 0.097 12.8 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4825) NSP11 PF06471.12 ORF50193 - 0.14 10.6 1.0 0.14 10.6 1.0 1.0 1 0 0 1 1 1 0 NSP11 NTP_transf_5 PF14907.6 ORF49797 - 0.13 11.8 1.5 0.16 11.5 1.5 1.3 1 1 0 1 1 1 0 Uncharacterised nucleotidyltransferase DUF777 PF05606.11 ORF49344 - 0.79 9.5 6.6 0.84 9.4 6.6 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF777) Trimer_CC PF08954.11 ORF48702 - 0.034 13.7 1.6 0.18 11.4 1.6 2.0 1 1 0 1 1 1 0 Trimerisation motif DUF3194 PF11419.8 ORF48690 - 0.00026 21.3 0.3 2.2 8.7 0.0 3.0 1 1 2 3 3 3 3 Protein of unknown function (DUF3194) SASP PF00269.20 ORF48690 - 0.24 11.4 7.7 4.3 7.4 0.8 3.1 3 0 0 3 3 3 0 Small, acid-soluble spore proteins, alpha/beta type RGCC PF15151.6 ORF47833 - 0.16 12.2 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Response gene to complement 32 protein family zf-C3Hc3H PF13891.6 ORF47442 - 0.21 12.0 2.9 0.7 10.3 0.4 2.1 2 0 0 2 2 2 0 Potential DNA-binding domain Peptidase_M48 PF01435.18 ORF47168 - 1.2e-12 48.0 0.0 1.4e-12 47.8 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M48 DUF4835 PF16119.5 ORF47168 - 0.055 12.6 0.0 0.055 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4835) Fijivirus_P9-2 PF06837.11 ORF46909 - 0.32 10.4 5.6 0.36 10.3 5.6 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein zf-C3Hc3H PF13891.6 ORF45631 - 0.21 12.0 2.9 0.7 10.3 0.4 2.1 2 0 0 2 2 2 0 Potential DNA-binding domain DUF2733 PF10813.8 ORF45043 - 0.056 13.2 0.1 0.083 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) Methyltransf_31 PF13847.6 ORF44492 - 0.018 14.8 0.0 0.02 14.7 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain C1_1 PF00130.22 ORF44008 - 2.8 7.9 9.9 10 6.1 0.5 2.5 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Spec3 PF15795.5 ORF43876 - 3.5e-12 46.7 13.4 3.2e-07 30.8 2.9 2.1 1 1 1 2 2 2 2 Ectodermal ciliogenesis protein iPGM_N PF06415.13 ORF43616 - 0.027 14.0 0.7 0.029 13.8 0.7 1.0 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) DnaB_bind PF10410.9 ORF43616 - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase DUF5129 PF17173.4 ORF42842 - 0.16 11.1 0.1 0.14 11.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) PRF PF06875.11 ORF42666 - 0.015 14.7 0.0 0.015 14.7 0.0 1.0 1 0 0 1 1 1 0 Plethodontid receptivity factor PRF DUF3952 PF13130.6 ORF41916 - 0.07 13.3 0.4 0.14 12.3 0.3 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF3952) DUF3511 PF12023.8 ORF41534 - 0.039 13.8 0.1 0.063 13.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3511) LSM PF01423.22 ORF4136 - 1e-18 66.7 0.5 1.2e-18 66.5 0.5 1.0 1 0 0 1 1 1 1 LSM domain motB PF17613.2 ORF41336 - 0.032 14.1 0.1 0.033 14.0 0.1 1.1 1 0 0 1 1 1 0 Modifier of transcription Nodulin_late PF07127.11 ORF40767 - 0.052 13.9 0.3 0.073 13.4 0.3 1.2 1 0 0 1 1 1 0 Late nodulin protein Flavi_capsid PF01003.19 ORF40767 - 0.19 11.5 0.1 0.22 11.3 0.1 1.1 1 0 0 1 1 1 0 Flavivirus capsid protein C STAG PF08514.11 ORF38899 - 0.0001 22.2 0.4 0.00013 21.9 0.4 1.1 1 0 0 1 1 1 1 STAG domain YhhN PF07947.14 ORF38589 - 0.06 13.0 3.2 0.071 12.7 3.2 1.0 1 0 0 1 1 1 0 YhhN family DUF4131 PF13567.6 ORF38589 - 1.3 8.6 3.3 1.7 8.3 3.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Phosducin PF02114.16 ORF37455 - 0.2 10.5 0.3 0.25 10.2 0.3 1.1 1 0 0 1 1 1 0 Phosducin S100PBPR PF15427.6 ORF37434 - 6 6.0 18.9 6.5 5.9 18.9 1.0 1 0 0 1 1 1 0 S100P-binding protein ErmC PF06308.11 ORF34871 - 0.012 16.0 1.9 0.031 14.6 1.9 1.7 1 0 0 1 1 1 0 23S rRNA methylastransferase leader peptide (ErmCL) DUF16 PF01519.16 ORF34871 - 0.26 11.8 5.9 0.52 10.8 5.9 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 CD225 PF04505.12 ORF34499 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein RP-C_C PF11800.8 ORF33944 - 0.0045 17.1 1.6 0.0046 17.1 1.6 1.0 1 0 0 1 1 1 1 Replication protein C C-terminal region DUF3116 PF11313.8 ORF33944 - 0.011 15.6 1.8 0.012 15.5 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) Cas_Cmr5 PF09701.10 ORF33944 - 0.041 14.2 4.3 0.053 13.8 4.3 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr5) DUF1104 PF06518.11 ORF33944 - 0.84 10.0 8.4 1.3 9.4 8.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1104) SPARC_Ca_bdg PF10591.9 ORF33944 - 1 9.7 6.1 1.6 9.0 6.0 1.4 1 1 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region ABC_membrane_3 PF13748.6 ORF33478 - 0.12 11.6 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region FeThRed_B PF02943.15 ORF32415 - 0.47 10.5 4.5 1.4 9.0 4.5 1.7 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain MNNL PF07657.13 ORF32098 - 0.0098 15.9 1.0 0.012 15.7 1.0 1.1 1 0 0 1 1 1 1 N terminus of Notch ligand Transglut_N PF00868.20 ORF31566 - 0.063 13.6 0.0 0.073 13.4 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase family Zn-ribbon_8 PF09723.10 ORF30956 - 6.6 6.9 11.6 8.3 6.6 5.9 2.1 2 0 0 2 2 2 0 Zinc ribbon domain Popeye PF04831.13 ORF30349 - 0.94 9.6 6.7 1.1 9.5 6.7 1.1 1 0 0 1 1 1 0 Popeye protein conserved region ArsD PF06953.11 ORF30116 - 0.009 16.4 0.2 0.0098 16.2 0.2 1.1 1 0 0 1 1 1 1 Arsenical resistance operon trans-acting repressor ArsD SWIB PF02201.18 ORF30116 - 0.03 14.2 3.0 0.96 9.4 0.2 2.1 1 1 1 2 2 2 0 SWIB/MDM2 domain Archaeal_AmoA PF12942.7 ORF29938 - 0.045 13.4 0.5 0.05 13.3 0.5 1.2 1 0 0 1 1 1 0 Archaeal ammonia monooxygenase subunit A (AmoA) 2Fe-2S_Ferredox PF11591.8 ORF29489 - 0.016 15.1 3.8 0.033 14.1 3.8 1.6 1 0 0 1 1 1 0 Ferredoxin chloroplastic transit peptide AdoMetDC_leader PF08132.11 ORF28840 - 0.14 12.1 1.1 2.9 7.9 0.1 2.2 2 0 0 2 2 2 0 S-adenosyl-l-methionine decarboxylase leader peptide P22_Tail-4 PF11650.8 ORF28711 - 0.016 15.1 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 P22 tail accessory factor CD225 PF04505.12 ORF27365 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein Isy1 PF06246.12 ORF27198 - 0.028 14.0 1.1 0.032 13.8 1.1 1.1 1 0 0 1 1 1 0 Isy1-like splicing family TipAS PF07739.13 ORF27198 - 0.077 13.5 0.2 0.083 13.4 0.2 1.2 1 0 0 1 1 1 0 TipAS antibiotic-recognition domain COX17 PF05051.13 ORF27198 - 0.077 13.4 2.8 0.13 12.7 0.2 2.0 1 1 1 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) Tricorn_C1 PF14684.6 ORF27198 - 0.12 12.5 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Tricorn protease C1 domain UPF0203 PF05254.12 ORF27198 - 0.35 11.2 6.4 0.38 11.0 1.0 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0203) ATXN-1_C PF12547.8 ORF27184 - 0.0059 16.9 0.1 0.0085 16.4 0.1 1.2 1 0 0 1 1 1 1 Capicua transcriptional repressor modulator CAP_N PF01213.19 ORF26407 - 5.2 6.5 9.1 5.8 6.3 9.1 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal GYF PF02213.16 ORF26283 - 0.071 12.8 0.4 0.11 12.2 0.4 1.3 1 0 0 1 1 1 0 GYF domain FeThRed_B PF02943.15 ORF26071 - 0.47 10.5 4.5 1.4 9.0 4.5 1.7 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain Phasin PF05597.11 ORF25723 - 0.037 14.0 0.0 0.039 14.0 0.0 1.1 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) GCR PF02155.15 ORF24983 - 0.047 12.7 0.0 0.047 12.7 0.0 1.1 1 0 0 1 1 1 0 Glucocorticoid receptor Suppressor_P21 PF11479.8 ORF24285 - 0.14 12.3 0.1 0.17 12.1 0.1 1.2 1 0 0 1 1 1 0 RNA silencing suppressor P21 C-terminal domain c-SKI_SMAD_bind PF08782.10 ORF23840 - 0.08 13.2 3.2 0.1 12.8 3.2 1.2 1 0 0 1 1 1 0 c-SKI Smad4 binding domain YlaH PF14036.6 ORF23823 - 0.072 13.4 0.6 0.072 13.4 0.6 2.0 2 1 0 2 2 2 0 YlaH-like protein DNA_pol_P_Exo PF18049.1 ORF22323 - 0.068 12.6 0.0 0.07 12.5 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase nu pseudo-exo Atg8 PF02991.16 ORF21811 - 2.1e-21 76.1 0.2 2.3e-21 75.9 0.2 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 ORF21811 - 0.00089 19.6 0.1 0.00095 19.5 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 DUF4661 PF15576.6 ORF2129 - 8.2 6.3 8.2 9.2 6.1 8.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) FYVE PF01363.21 ORF2126 - 1.5 9.0 15.0 0.15 12.2 10.1 1.8 2 0 0 2 2 2 0 FYVE zinc finger Transcript_VP30 PF11507.8 ORF20906 - 0.05 13.7 0.1 0.05 13.7 0.1 1.5 1 1 1 2 2 2 0 Ebola virus-specific transcription factor VP30 DUF2857 PF11198.8 ORF20560 - 0.042 13.6 0.0 0.05 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) CathepsinC_exc PF08773.11 ORF20560 - 0.08 13.2 0.2 0.087 13.1 0.2 1.1 1 0 0 1 1 1 0 Cathepsin C exclusion domain NPBW PF15180.6 ORF20472 - 0.079 12.8 1.3 0.12 12.2 1.3 1.3 1 0 0 1 1 1 0 Neuropeptides B and W DUF908 PF06012.12 ORF18844 - 0.088 12.2 0.2 0.092 12.1 0.2 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) Crystall PF00030.19 ORF18178 - 0.12 12.6 0.0 0.22 11.7 0.0 1.6 1 1 0 1 1 1 0 Beta/Gamma crystallin CD225 PF04505.12 ORF17331 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein DUF4799 PF16056.5 ORF17051 - 0.02 14.1 0.1 0.02 14.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4799) Toxin_34 PF08396.10 ORF16739 - 0.013 16.3 0.6 0.018 15.8 0.6 1.2 1 0 0 1 1 1 0 Spider toxin omega agatoxin/Tx1 family APC_r PF05923.12 ORF16610 - 0.021 14.6 0.4 0.035 13.9 0.4 1.4 1 0 0 1 1 1 0 APC repeat DUF4477 PF14780.6 ORF15818 - 0.15 11.6 0.2 0.18 11.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) DUF5367 PF17329.2 ORF15733 - 0.0087 16.2 3.6 0.012 15.7 3.2 1.4 1 1 1 2 2 2 1 Family of unknown function (DUF5367) DUF2061 PF09834.9 ORF15733 - 0.14 12.6 2.4 0.87 10.1 2.4 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2061) PHR PF08005.12 ORF152440 - 1.5e-06 29.0 1.2 5.2e-06 27.2 1.0 1.8 1 1 0 1 1 1 1 PHR domain TryThrA_C PF12319.8 ORF152135 - 0.016 14.7 0.5 0.017 14.6 0.5 1.1 1 0 0 1 1 1 0 Tryptophan-Threonine-rich plasmodium antigen C terminal PDDEXK_2 PF12784.7 ORF152135 - 0.035 13.6 1.8 0.15 11.5 0.9 1.9 1 1 1 2 2 2 0 PD-(D/E)XK nuclease family transposase DUF2207 PF09972.9 ORF151694 - 0.33 9.7 2.1 0.36 9.5 2.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) UMPH-1 PF05822.12 ORF151026 - 0.084 12.4 1.3 0.09 12.3 1.3 1.1 1 0 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) FeThRed_B PF02943.15 ORF150296 - 0.47 10.5 4.5 1.4 9.0 4.5 1.7 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain PhoLip_ATPase_N PF16209.5 ORF14948 - 0.15 11.7 4.4 0.072 12.8 1.2 2.1 1 1 1 2 2 2 0 Phospholipid-translocating ATPase N-terminal Phasin PF05597.11 ORF149002 - 0.037 14.0 0.0 0.039 14.0 0.0 1.1 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) CD225 PF04505.12 ORF148985 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein MmoB_DmpM PF02406.17 ORF14855 - 0.071 13.3 0.8 0.082 13.1 0.8 1.3 1 0 0 1 1 1 0 MmoB/DmpM family nlz1 PF12402.8 ORF148344 - 0.13 12.7 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 NocA-like zinc-finger protein 1 HCV_NS4a PF01006.20 ORF148237 - 0.013 15.2 2.6 0.019 14.7 1.4 1.9 1 1 1 2 2 2 0 Hepatitis C virus non-structural protein NS4a DUF5558 PF17713.1 ORF1482 - 2.1 8.7 10.5 9.1 6.7 10.5 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5558) DUF3194 PF11419.8 ORF147393 - 0.00026 21.3 0.3 2.2 8.7 0.0 3.0 1 1 2 3 3 3 3 Protein of unknown function (DUF3194) SASP PF00269.20 ORF147393 - 0.24 11.4 7.7 4.3 7.4 0.8 3.1 3 0 0 3 3 3 0 Small, acid-soluble spore proteins, alpha/beta type NOA36 PF06524.12 ORF147280 - 1.1 8.5 9.2 1.3 8.3 9.2 1.0 1 0 0 1 1 1 0 NOA36 protein COX6B PF02297.17 ORF147058 - 2.5e-13 50.0 2.0 2.8e-13 49.9 2.0 1.0 1 0 0 1 1 1 1 Cytochrome oxidase c subunit VIb CID_GANP PF16766.5 ORF146609 - 0.066 13.4 0.4 0.12 12.6 0.4 1.3 1 0 0 1 1 1 0 Binding region of GANP to ENY2 DnaJ_CXXCXGXG PF00684.19 ORF146560 - 0.075 13.4 6.4 0.11 12.9 6.4 1.3 1 0 0 1 1 1 0 DnaJ central domain DUF2618 PF10940.8 ORF146523 - 6.6 6.6 7.0 8.7 6.2 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) Noelin-1 PF12308.8 ORF146200 - 0.0015 18.5 0.3 0.0032 17.4 0.2 1.5 1 1 1 2 2 2 1 Neurogenesis glycoprotein FlxA PF14282.6 ORF146200 - 0.02 14.9 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 FlxA-like protein Tropomyosin PF00261.20 ORF146200 - 0.057 12.8 0.3 0.07 12.5 0.3 1.2 1 0 0 1 1 1 0 Tropomyosin NPV_P10 PF05531.12 ORF146200 - 0.1 13.1 0.2 0.6 10.6 0.2 2.0 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein HisKA_2 PF07568.12 ORF144486 - 0.053 13.6 0.2 0.08 13.0 0.2 1.3 1 0 0 1 1 1 0 Histidine kinase Tafi-CsgC PF10610.9 ORF14406 - 0.1 12.8 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Thin aggregative fimbriae synthesis protein DUF1161 PF06649.12 ORF14390 - 0.071 13.3 0.2 0.15 12.3 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1161) Peptidase_C74 PF12387.8 ORF143730 - 0.11 12.0 0.5 0.1 12.1 0.5 1.2 1 0 0 1 1 1 0 Pestivirus NS2 peptidase SMC_N PF02463.19 ORF143103 - 0.023 14.2 0.3 0.028 13.9 0.3 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Imm58 PF15581.6 ORF143103 - 0.062 13.4 0.0 0.071 13.2 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 58 DUF4863 PF16155.5 ORF142019 - 0.21 11.4 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4863) PaO PF08417.12 ORF142011 - 0.086 13.0 2.9 2.9 8.1 0.0 2.1 1 1 1 2 2 2 0 Pheophorbide a oxygenase Terminase_3 PF04466.13 ORF141427 - 0.044 13.3 0.1 0.049 13.2 0.1 1.0 1 0 0 1 1 1 0 Phage terminase large subunit Kazal_2 PF07648.15 ORF141405 - 0.041 14.0 0.1 0.055 13.6 0.1 1.3 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain Gemini_AL1 PF00799.20 ORF141371 - 0.12 12.8 1.0 0.16 12.4 1.1 1.3 1 1 0 1 1 1 0 Geminivirus Rep catalytic domain Ysc84 PF04366.12 ORF141113 - 0.088 12.6 0.2 0.21 11.3 0.0 1.6 1 1 1 2 2 2 0 Las17-binding protein actin regulator Peptidase_C92 PF05708.12 ORF140199 - 0.043 13.9 0.0 0.046 13.8 0.0 1.2 1 0 0 1 1 1 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family iPGM_N PF06415.13 ORF139883 - 0.027 14.0 0.7 0.029 13.8 0.7 1.0 1 0 0 1 1 1 0 BPG-independent PGAM N-terminus (iPGM_N) DnaB_bind PF10410.9 ORF139883 - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase DUF3379 PF11859.8 ORF139087 - 0.017 14.4 0.0 0.017 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) DNA_ligase_aden PF01653.18 ORF137938 - 0.013 14.6 0.0 0.013 14.6 0.0 1.0 1 0 0 1 1 1 0 NAD-dependent DNA ligase adenylation domain Tfb2_C PF18307.1 ORF136713 - 2.7e-07 30.9 0.0 3.1e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Tfb2 (p52) C-terminal domain T2SSL PF05134.13 ORF136027 - 0.12 11.6 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein L Spike_NTD PF16451.5 ORF135589 - 0.091 12.1 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain LSR PF05624.14 ORF135515 - 0.043 13.8 10.8 0.061 13.3 10.8 1.3 1 0 0 1 1 1 0 Lipolysis stimulated receptor (LSR) 7tm_2 PF00002.24 ORF135090 - 0.036 13.3 0.1 0.04 13.2 0.1 1.1 1 0 0 1 1 1 0 7 transmembrane receptor (Secretin family) ThrE PF06738.12 ORF134545 - 0.023 14.1 1.9 0.026 13.9 1.9 1.1 1 0 0 1 1 1 0 Putative threonine/serine exporter TEA PF01285.18 ORF134219 - 0.16 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 TEA/ATTS domain DUF1106 PF06523.11 ORF134030 - 0.011 15.8 0.2 0.016 15.3 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1106) C1_1 PF00130.22 ORF134030 - 0.014 15.3 1.3 0.021 14.7 1.3 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) FYVE PF01363.21 ORF134030 - 0.017 15.3 1.4 0.019 15.1 1.4 1.2 1 0 0 1 1 1 0 FYVE zinc finger DUF3307 PF11750.8 ORF133415 - 0.068 13.2 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3307) zf-nanos PF05741.13 ORF133110 - 0.13 12.5 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Nanos RNA binding domain Leptin PF02024.15 ORF132333 - 0.017 14.9 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Leptin RNA_pol_Rpb4 PF03874.16 ORF132333 - 0.055 13.8 1.9 0.092 13.1 1.9 1.5 1 1 0 1 1 1 0 RNA polymerase Rpb4 MNHE PF01899.16 ORF132315 - 0.093 12.5 0.3 0.098 12.4 0.3 1.0 1 0 0 1 1 1 0 Na+/H+ ion antiporter subunit zf-CGNR PF11706.8 ORF132263 - 0.057 13.3 0.6 0.089 12.7 0.6 1.2 1 0 0 1 1 1 0 CGNR zinc finger p12I PF12233.8 ORF132263 - 0.16 12.5 0.0 2.6 8.6 0.0 2.0 1 1 1 2 2 2 0 Human adult T cell leukemia/lymphoma virus protein zf-BED PF02892.15 ORF131771 - 0.089 12.8 0.6 0.2 11.7 0.6 1.6 1 0 0 1 1 1 0 BED zinc finger DcuC PF03606.15 ORF131740 - 0.27 9.7 0.0 0.33 9.4 0.0 1.1 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier RMI1_N PF08585.12 ORF130580 - 8.6e-13 48.5 0.1 9.6e-13 48.4 0.1 1.0 1 0 0 1 1 1 1 RecQ mediated genome instability protein Caleosin PF05042.13 ORF130510 - 0.056 13.4 0.8 0.082 12.8 0.6 1.3 1 1 0 1 1 1 0 Caleosin related protein Peptidase_A21 PF03566.13 ORF130463 - 0.15 10.3 0.3 0.14 10.4 0.3 1.0 1 0 0 1 1 1 0 Peptidase family A21 DUF543 PF04418.12 ORF130059 - 0.15 12.1 0.3 0.2 11.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF543) DivIC PF04977.15 ORF129944 - 1.7 8.5 6.0 0.4 10.5 2.1 1.9 2 1 0 2 2 2 0 Septum formation initiator Ribosomal_L38e PF01781.18 ORF129292 - 1.2e-20 73.4 3.2 1.4e-20 73.2 3.2 1.0 1 0 0 1 1 1 1 Ribosomal L38e protein family CRAL_TRIO PF00650.20 ORF128819 - 0.00022 21.0 0.0 0.00029 20.6 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain SLATT_fungal PF18142.1 ORF128717 - 0.17 11.9 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain DUF4268 PF14088.6 ORF127839 - 0.093 12.6 0.0 0.097 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4268) Chalcone PF02431.15 ORF127831 - 0.13 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Chalcone-flavanone isomerase UPF0370 PF13980.6 ORF127831 - 1.6 8.8 4.5 7.6 6.7 3.9 1.9 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0370) FAM199X PF15814.5 ORF126844 - 2.3 7.2 6.6 2.4 7.1 6.6 1.0 1 0 0 1 1 1 0 Protein family FAM199X DUF485 PF04341.12 ORF126357 - 0.47 10.4 9.9 0.57 10.2 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF805 PF05656.14 ORF126357 - 1 9.8 8.4 1.3 9.5 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF805) Ras PF00071.22 ORF12587 - 2.5e-07 30.4 0.0 2.5e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF12587 - 0.0015 18.7 0.0 0.0016 18.7 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase PhoLip_ATPase_N PF16209.5 ORF124432 - 0.1 12.3 0.3 0.1 12.3 0.3 1.9 1 1 1 2 2 2 0 Phospholipid-translocating ATPase N-terminal OpcA_G6PD_assem PF10128.9 ORF124374 - 0.074 12.6 0.0 0.074 12.6 0.0 1.0 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase subunit CD225 PF04505.12 ORF124201 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein ydhR PF08803.11 ORF123860 - 0.025 14.5 0.0 0.031 14.2 0.0 1.2 1 0 0 1 1 1 0 Putative mono-oxygenase ydhR RasGAP_C PF03836.15 ORF123744 - 0.023 14.8 0.4 0.026 14.7 0.4 1.1 1 0 0 1 1 1 0 RasGAP C-terminus CD225 PF04505.12 ORF123376 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein DUF5317 PF17248.2 ORF123111 - 0.037 14.0 0.0 0.042 13.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5317) CALM_bind PF16025.5 ORF123101 - 0.076 13.5 5.8 0.099 13.1 5.8 1.2 1 0 0 1 1 1 0 Calcium-dependent calmodulin binding Antimicrobial25 PF16839.5 ORF122831 - 0.028 14.5 1.5 0.044 13.9 1.5 1.3 1 0 0 1 1 1 0 Nematode antimicrobial peptide Pkinase PF00069.25 ORF122800 - 3.9e-16 59.2 0.0 4.2e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF122800 - 3.3e-07 29.9 0.1 3.3e-07 29.9 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF122800 - 0.096 12.0 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Kinase-like CD225 PF04505.12 ORF122412 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein DUF2207 PF09972.9 ORF12187 - 5.6 5.6 4.9 5.3 5.7 4.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CD225 PF04505.12 ORF121835 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein TMEM239 PF15841.5 ORF121762 - 0.38 10.7 5.0 0.39 10.6 5.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 239 family RPS31 PF17067.5 ORF121697 - 0.095 12.9 2.6 0.1 12.7 2.6 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e Mit_proteolip PF08039.11 ORF120576 - 0.12 12.8 0.3 0.19 12.2 0.3 1.4 1 0 0 1 1 1 0 Mitochondrial proteolipid CopD PF05425.13 ORF119439 - 0.025 14.9 0.4 0.033 14.6 0.4 1.1 1 0 0 1 1 1 0 Copper resistance protein D DUF1892 PF08987.10 ORF119078 - 0.13 12.5 0.1 0.27 11.4 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1892) Mesd PF10185.9 ORF118879 - 0.0072 16.3 0.0 0.009 16.0 0.0 1.0 1 0 0 1 1 1 1 Chaperone for wingless signalling and trafficking of LDL receptor PPTA PF01239.22 ORF118518 - 0.056 13.2 0.7 0.21 11.4 0.1 2.1 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat ERGIC_N PF13850.6 ORF11833 - 0.57 10.6 3.9 0.96 9.8 3.9 1.6 1 1 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) HTH_5 PF01022.20 ORF118231 - 4.1e-15 55.4 0.1 6.3e-15 54.8 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 ORF118231 - 5.2e-09 35.5 0.0 1.1e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 ORF118231 - 5.8e-09 35.7 0.1 7.8e-09 35.3 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 ORF118231 - 7.2e-08 32.4 0.1 8.6e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 ORF118231 - 3.3e-06 26.9 0.0 5.7e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 ORF118231 - 0.00082 19.1 0.3 0.0011 18.7 0.3 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 ORF118231 - 0.0019 18.1 0.3 0.0035 17.3 0.3 1.5 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 ORF118231 - 0.0067 16.7 0.0 0.014 15.8 0.0 1.5 1 1 1 2 2 2 1 Transcriptional regulator HTH_27 PF13463.6 ORF118231 - 0.024 15.1 0.0 0.031 14.8 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain PaaX PF07848.12 ORF118231 - 0.033 14.4 0.0 0.039 14.2 0.0 1.2 1 0 0 1 1 1 0 PaaX-like protein LexA_DNA_bind PF01726.16 ORF118231 - 0.11 12.3 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 LexA DNA binding domain AbiEi_4 PF13338.6 ORF118231 - 0.15 12.3 0.1 0.22 11.7 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin Peptidase_M3 PF01432.20 ORF11787 - 0.083 12.1 0.1 0.083 12.1 0.1 1.0 1 0 0 1 1 1 0 Peptidase family M3 DHHC PF01529.20 ORF117504 - 0.016 15.3 2.6 0.021 14.9 2.6 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase GvpG PF05120.12 ORF117504 - 0.025 14.6 1.0 0.036 14.1 1.0 1.3 1 1 0 1 1 1 0 Gas vesicle protein G ERGIC_N PF13850.6 ORF117504 - 0.036 14.4 0.5 0.044 14.1 0.5 1.3 1 1 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Leptin PF02024.15 ORF117449 - 0.017 14.9 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Leptin RNA_pol_Rpb4 PF03874.16 ORF117449 - 0.055 13.8 1.9 0.092 13.1 1.9 1.5 1 1 0 1 1 1 0 RNA polymerase Rpb4 IFP_35_N PF07334.13 ORF117388 - 0.14 12.2 0.2 0.19 11.8 0.2 1.1 1 0 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus GARS_C PF02843.16 ORF117223 - 0.12 12.7 0.1 0.13 12.5 0.1 1.1 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, C domain EST1_DNA_bind PF10373.9 ORF115515 - 0.088 12.3 0.9 0.1 12.0 0.9 1.0 1 0 0 1 1 1 0 Est1 DNA/RNA binding domain Cytochrom_C PF00034.21 ORF115216 - 0.029 15.5 0.0 0.044 14.9 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c Anophelin PF10731.9 ORF115216 - 0.093 12.6 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Thrombin inhibitor from mosquito MatK_N PF01824.18 ORF114712 - 0.032 13.9 4.2 0.038 13.7 4.2 1.0 1 0 0 1 1 1 0 MatK/TrnK amino terminal region MGC-24 PF05283.11 ORF114377 - 0.091 13.2 6.1 0.094 13.2 6.1 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Mucin PF01456.17 ORF114377 - 1.2 9.1 24.1 1.3 9.0 24.1 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein SPESP1 PF15754.5 ORF114377 - 4.1 6.5 8.0 5 6.2 8.0 1.0 1 0 0 1 1 1 0 Sperm equatorial segment protein 1 DUF1700 PF08006.11 ORF114202 - 0.44 10.0 4.5 0.47 10.0 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF2407_C PF13373.6 ORF114126 - 0.0018 18.4 0.1 0.0019 18.4 0.1 1.1 1 0 0 1 1 1 1 DUF2407 C-terminal domain GST_C_6 PF17171.4 ORF113908 - 0.0087 15.8 0.0 0.012 15.4 0.0 1.4 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain CvfB_WH PF17783.1 ORF113171 - 0.022 14.6 1.2 0.036 13.9 1.2 1.6 1 1 0 1 1 1 0 CvfB-like winged helix domain SIS PF01380.22 ORF113057 - 5e-05 23.1 0.2 6.2e-05 22.9 0.2 1.1 1 0 0 1 1 1 1 SIS domain Glycoprot_B_PH2 PF17417.2 ORF113013 - 0.018 15.3 0.1 0.02 15.2 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus Glycoprotein B PH-like domain FeThRed_B PF02943.15 ORF112728 - 0.47 10.5 4.5 1.4 9.0 4.5 1.7 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain Archaeal_AmoA PF12942.7 ORF11259 - 0.045 13.4 0.5 0.05 13.3 0.5 1.2 1 0 0 1 1 1 0 Archaeal ammonia monooxygenase subunit A (AmoA) DUF2418 PF10332.9 ORF111611 - 0.18 12.3 3.9 0.23 12.0 3.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) Syja_N PF02383.18 ORF1110 - 0.00011 21.7 0.0 0.00012 21.5 0.0 1.0 1 0 0 1 1 1 1 SacI homology domain FeThRed_B PF02943.15 ORF110942 - 0.47 10.5 4.5 1.4 9.0 4.5 1.7 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain DUF591 PF04569.14 ORF108978 - 0.046 13.8 1.4 0.066 13.3 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function Glyco_hydro_67C PF07477.12 ORF10836 - 0.043 13.4 0.0 0.043 13.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 C-terminus Leptin PF02024.15 ORF107496 - 0.017 14.9 0.1 0.018 14.8 0.1 1.2 1 0 0 1 1 1 0 Leptin RNA_pol_Rpb4 PF03874.16 ORF107496 - 0.055 13.8 1.9 0.092 13.1 1.9 1.5 1 1 0 1 1 1 0 RNA polymerase Rpb4 NIPSNAP PF07978.13 ORF106408 - 0.03 14.5 0.0 0.038 14.2 0.0 1.2 1 0 0 1 1 1 0 NIPSNAP PPI_Ypi1 PF07491.11 ORF10632 - 0.32 10.9 1.0 0.45 10.4 1.0 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor PAN_3 PF08277.12 ORF10616 - 0.6 10.0 8.5 0.37 10.6 7.1 1.4 1 1 0 1 1 1 0 PAN-like domain zf-C3Hc3H PF13891.6 ORF106073 - 0.21 12.0 2.9 0.7 10.3 0.4 2.1 2 0 0 2 2 2 0 Potential DNA-binding domain TctA PF01970.16 ORF105447 - 0.3 9.8 1.7 0.31 9.7 1.7 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family zf-LITAF-like PF10601.9 ORF105447 - 4.2 7.7 7.8 7 7.0 7.8 1.6 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain SANT_DAMP1_like PF16282.5 ORF105189 - 0.031 14.5 0.1 0.041 14.1 0.1 1.2 1 0 0 1 1 1 0 SANT/Myb-like domain of DAMP1 CCDC-167 PF15188.6 ORF105189 - 0.032 14.6 1.4 0.039 14.3 1.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 EMC3_TMCO1 PF01956.16 ORF105189 - 0.089 12.5 0.7 0.097 12.4 0.7 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like SMC_N PF02463.19 ORF105097 - 0.0015 18.0 0.1 0.0018 17.8 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain Lpp-LpqN PF10738.9 ORF105097 - 0.13 11.8 0.0 0.14 11.6 0.0 1.1 1 0 0 1 1 1 0 Probable lipoprotein LpqN WRW PF10206.9 ORF104663 - 0.082 13.3 0.2 0.1 13.0 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f Imm58 PF15581.6 ORF104554 - 0.00097 19.2 0.0 0.0011 19.0 0.0 1.1 1 0 0 1 1 1 1 Immunity protein 58 SMC_N PF02463.19 ORF104554 - 0.14 11.5 0.4 0.17 11.3 0.4 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain tRNA_synt_1c_R1 PF04558.15 ORF103892 - 0.0093 16.0 1.5 0.011 15.8 0.8 1.5 1 1 0 1 1 1 1 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 6PGD PF00393.19 ORF103892 - 0.065 12.6 0.3 0.076 12.4 0.3 1.1 1 0 0 1 1 1 0 6-phosphogluconate dehydrogenase, C-terminal domain UPF0147 PF03685.13 ORF103892 - 0.12 12.4 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) Pox_P4B PF03292.14 ORF103705 - 0.033 12.5 0.3 0.033 12.5 0.3 1.0 1 0 0 1 1 1 0 Poxvirus P4B major core protein PDE4_UCR PF18100.1 ORF103441 - 0.026 15.2 0.3 0.033 14.8 0.3 1.1 1 0 0 1 1 1 0 Phosphodiesterase 4 upstream conserved regions (UCR) BNIP2 PF12496.8 ORF103424 - 0.021 15.2 1.6 0.025 15.0 1.6 1.0 1 0 0 1 1 1 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 CD225 PF04505.12 ORF103336 - 0.072 13.2 0.3 0.097 12.8 0.3 1.2 1 0 0 1 1 1 0 Interferon-induced transmembrane protein RRXRR PF14239.6 ORF102636 - 0.07 13.0 0.0 0.074 12.9 0.0 1.1 1 0 0 1 1 1 0 RRXRR protein FeThRed_B PF02943.15 ORF100859 - 0.47 10.5 4.5 1.4 9.0 4.5 1.7 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain Imm58 PF15581.6 ORF100606 - 0.011 15.8 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 58 SMC_N PF02463.19 ORF100606 - 0.076 12.4 0.8 0.092 12.2 0.8 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain DUF5326 PF17260.2 ORF100391 - 0.0073 16.4 1.2 0.011 15.9 1.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5326) ELH PF02323.15 ORF100391 - 1.5 8.1 2.4 1.9 7.8 2.4 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor DUF2722 PF10846.8 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 0.084 11.8 12.9 0.083 11.8 12.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) DUF4834 PF16118.5 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 0.33 11.9 4.8 0.39 11.7 4.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4770 PF15994.5 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 0.49 10.6 8.6 0.53 10.5 8.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) Activator_LAG-3 PF11498.8 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 1 8.2 22.0 1.1 8.1 22.0 1.0 1 0 0 1 1 1 0 Transcriptional activator LAG-3 Androgen_recep PF02166.16 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 1.1 8.0 14.1 1.1 8.0 14.1 1.1 1 0 0 1 1 1 0 Androgen receptor Spt20 PF12090.8 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 1.1 8.8 20.9 1.3 8.6 20.9 1.0 1 0 0 1 1 1 0 Spt20 family TFIIA PF03153.13 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 1.2 9.0 16.4 1.2 9.1 16.4 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Presenilin PF01080.17 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 1.3 7.7 4.8 1.3 7.7 4.8 1.0 1 0 0 1 1 1 0 Presenilin NEMP PF10225.9 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 1.5 8.5 4.0 1.5 8.4 4.0 1.0 1 0 0 1 1 1 0 NEMP family Roughex PF06020.11 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_1 - 3 6.8 7.9 3.1 6.8 7.9 1.0 1 0 0 1 1 1 0 Drosophila roughex protein SLATT_1 PF18181.1 NODE_68398_length_232_cov_0.923858_g60457_i0forward_frame_1 - 0.018 14.9 3.7 0.02 14.8 3.7 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 PDEase_I PF00233.19 NODE_68391_length_232_cov_1.015228_g60450_i0forward_frame_1 - 0.088 12.5 0.2 0.089 12.5 0.2 1.1 1 0 0 1 1 1 0 3'5'-cyclic nucleotide phosphodiesterase UbiD PF01977.16 NODE_68386_length_232_cov_1.111675_g60445_i0reverse_frame_1 - 0.22 10.3 0.0 0.23 10.3 0.0 1.0 1 0 0 1 1 1 0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ADAM17_MPD PF16698.5 NODE_68385_length_232_cov_1.111675_g60444_i0forward_frame_1 - 0.01 16.2 2.7 0.017 15.5 2.7 1.4 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 DUF2284 PF10050.9 NODE_68382_length_232_cov_1.152284_g60441_i0forward_frame_1 - 0.037 13.8 1.0 0.051 13.3 1.0 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) DDE_3 PF13358.6 NODE_68377_length_232_cov_1.203046_g60436_i0reverse_frame_1 - 0.14 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease Pyr_redox_2 PF07992.14 NODE_68372_length_232_cov_1.213198_g60431_i0reverse_frame_1 - 0.026 13.7 0.0 0.026 13.7 0.0 1.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase MPS-4 PF17523.2 NODE_68360_length_232_cov_1.228426_g60419_i0forward_frame_1 - 0.03 14.4 0.8 0.03 14.4 0.8 1.9 1 1 1 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 GWT1 PF06423.12 NODE_68360_length_232_cov_1.228426_g60419_i0forward_frame_1 - 0.092 12.9 0.9 0.1 12.7 0.9 1.1 1 0 0 1 1 1 0 GWT1 Pentapeptide PF00805.22 NODE_68356_length_232_cov_1.284264_g60415_i0reverse_frame_1 - 0.013 15.1 0.0 0.016 14.8 0.0 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (8 copies) Nucleoporin_FG PF13634.6 NODE_68354_length_232_cov_1.350254_g60413_i0reverse_frame_1 - 0.4 11.6 9.1 1.1 10.2 9.1 1.7 1 1 0 1 1 1 0 Nucleoporin FG repeat region Tudor-knot PF11717.8 NODE_68350_length_232_cov_1.380711_g60409_i0forward_frame_1 - 0.42 10.5 2.3 0.86 9.6 0.1 2.0 2 0 0 2 2 2 0 RNA binding activity-knot of a chromodomain EF-hand_7 PF13499.6 NODE_68349_length_232_cov_1.380711_g60408_i0forward_frame_1 - 0.037 14.5 0.1 0.048 14.1 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain pair ALMT PF11744.8 NODE_68344_length_232_cov_1.421320_g60403_i0forward_frame_1 - 0.064 12.1 1.1 0.11 11.3 0.2 1.6 1 1 1 2 2 2 0 Aluminium activated malate transporter zf-UBR PF02207.20 NODE_68337_length_232_cov_1.538071_g60396_i0reverse_frame_1 - 2.4e-16 59.6 10.1 3.4e-16 59.1 10.1 1.2 1 0 0 1 1 1 1 Putative zinc finger in N-recognin (UBR box) zf-dskA_traR PF01258.17 NODE_68337_length_232_cov_1.538071_g60396_i0reverse_frame_1 - 0.26 11.3 9.0 1 9.4 0.2 2.9 3 0 0 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger Abhydrolase_2 PF02230.16 NODE_68337_length_232_cov_1.538071_g60396_i0forward_frame_1 - 0.068 13.0 0.1 0.069 12.9 0.1 1.0 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase CAMSAP_CKK PF08683.11 NODE_68337_length_232_cov_1.538071_g60396_i0forward_frame_1 - 0.11 12.6 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Microtubule-binding calmodulin-regulated spectrin-associated SUD-M PF11633.8 NODE_68334_length_232_cov_1.543147_g60393_i0reverse_frame_1 - 0.11 12.2 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 Single-stranded poly(A) binding domain RAC_head PF16717.5 NODE_68329_length_232_cov_1.583756_g60388_i0forward_frame_1 - 0.045 14.7 0.1 0.05 14.6 0.1 1.1 1 0 0 1 1 1 0 Ribosome-associated complex head domain SPC22 PF04573.12 NODE_68320_length_232_cov_1.624365_g60379_i0forward_frame_1 - 0.018 14.5 0.1 0.021 14.3 0.1 1.0 1 0 0 1 1 1 0 Signal peptidase subunit FixH PF05751.11 NODE_68320_length_232_cov_1.624365_g60379_i0forward_frame_1 - 0.16 12.0 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 FixH RE_HaeIII PF09556.10 NODE_68314_length_232_cov_1.664975_g60373_i0reverse_frame_1 - 0.06 12.4 0.0 0.061 12.4 0.0 1.0 1 0 0 1 1 1 0 HaeIII restriction endonuclease # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks342.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks342.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks342.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks342.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MORN PF02493.20 NODE_68310_length_232_cov_1.685279_g60369_i0reverse_frame_1 - 6.4e-08 32.0 10.4 0.004 17.0 0.2 3.5 4 0 0 4 4 4 3 MORN repeat DUF1304 PF06993.12 NODE_68295_length_232_cov_1.822335_g60354_i0forward_frame_1 - 0.15 12.1 0.0 0.4 10.7 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1304) PAPA-1 PF04795.12 NODE_68288_length_232_cov_1.888325_g60347_i0forward_frame_1 - 0.026 15.3 0.7 0.033 15.0 0.7 1.1 1 0 0 1 1 1 0 PAPA-1-like conserved region CENP-X PF09415.10 NODE_68288_length_232_cov_1.888325_g60347_i0forward_frame_1 - 0.42 10.9 3.0 14 6.1 0.3 2.1 1 1 1 2 2 2 0 CENP-S associating Centromere protein X Ral PF11058.8 NODE_68286_length_232_cov_1.903553_g60345_i0forward_frame_1 - 0.2 11.2 1.0 0.3 10.7 1.0 1.4 1 0 0 1 1 1 0 Antirestriction protein Ral HSM3_N PF18795.1 NODE_68285_length_232_cov_1.908629_g60344_i0reverse_frame_1 - 0.16 11.3 0.0 0.17 11.3 0.0 1.0 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, N terminal domain Pil1 PF13805.6 NODE_68285_length_232_cov_1.908629_g60344_i0reverse_frame_1 - 0.17 11.3 0.0 0.18 11.2 0.0 1.0 1 0 0 1 1 1 0 Eisosome component PIL1 CD36 PF01130.21 NODE_68281_length_232_cov_2.065990_g60340_i0forward_frame_1 - 0.24 9.9 0.0 0.25 9.8 0.0 1.0 1 0 0 1 1 1 0 CD36 family Tubulin PF00091.25 NODE_68278_length_232_cov_2.096447_g60337_i0reverse_frame_1 - 1.1e-09 38.8 0.3 1.3e-09 38.6 0.3 1.1 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain DUF3709 PF12493.8 NODE_68278_length_232_cov_2.096447_g60337_i0forward_frame_1 - 2.2 8.4 9.5 1.4 9.0 6.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3709) Proteasome_A_N PF10584.9 NODE_68277_length_232_cov_2.192893_g60336_i0reverse_frame_1 - 0.063 13.0 0.0 0.088 12.5 0.0 1.3 1 0 0 1 1 1 0 Proteasome subunit A N-terminal signature Swm2 PF17083.5 NODE_68273_length_232_cov_2.269036_g60332_i0forward_frame_1 - 0.028 14.4 0.0 0.032 14.2 0.0 1.0 1 0 0 1 1 1 0 Nucleolar protein Swm2 TK PF00265.18 NODE_68269_length_232_cov_2.324873_g60328_i0forward_frame_1 - 0.024 14.5 0.1 0.027 14.4 0.1 1.0 1 0 0 1 1 1 0 Thymidine kinase DUF3776 PF12618.8 NODE_68262_length_232_cov_2.507614_g60321_i0reverse_frame_1 - 0.054 14.1 0.4 0.064 13.8 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3776) DUF5466 PF17554.2 NODE_68256_length_232_cov_2.609137_g60315_i0reverse_frame_1 - 0.086 13.1 1.4 0.16 12.2 0.3 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5466) FAD_binding_8 PF08022.12 NODE_68250_length_232_cov_2.751269_g60309_i0forward_frame_1 - 0.0016 18.5 0.0 0.0019 18.3 0.0 1.1 1 0 0 1 1 1 1 FAD-binding domain HRM PF02793.22 NODE_68246_length_232_cov_2.812183_g60305_i0reverse_frame_1 - 0.063 13.6 0.1 0.094 13.0 0.1 1.3 1 0 0 1 1 1 0 Hormone receptor domain Trehalose_PPase PF02358.16 NODE_68238_length_232_cov_3.416244_g60297_i0forward_frame_1 - 0.1 11.7 0.1 0.13 11.4 0.1 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase DUF5525 PF17663.1 NODE_68234_length_232_cov_3.680203_g60293_i0reverse_frame_1 - 0.028 12.5 1.3 0.029 12.5 1.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) zf_CCCH_5 PF18384.1 NODE_68227_length_232_cov_4.664975_g60286_i0forward_frame_1 - 0.46 10.6 3.5 2.6 8.2 0.2 2.2 2 0 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) Amastin PF07344.11 NODE_68226_length_232_cov_4.700508_g60285_i0forward_frame_1 - 0.027 14.3 1.1 0.037 13.9 1.1 1.2 1 0 0 1 1 1 0 Amastin surface glycoprotein ELO PF01151.18 NODE_68219_length_232_cov_24.197970_g60278_i0forward_frame_1 - 0.0083 15.7 0.6 0.0087 15.6 0.6 1.0 1 0 0 1 1 1 1 GNS1/SUR4 family Sid-5 PF17204.3 NODE_68218_length_232_cov_26.060914_g60277_i0reverse_frame_1 - 0.024 14.8 0.1 0.029 14.5 0.1 1.2 1 0 0 1 1 1 0 Sid-5 family DUF5477 PF17571.2 NODE_68208_length_232_cov_47.370558_g60267_i0reverse_frame_1 - 0.009 16.2 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5477) TcdB_N PF12918.7 NODE_68201_length_232_cov_55.583756_g60260_i0reverse_frame_1 - 0.044 14.1 0.1 0.068 13.5 0.1 1.2 1 0 0 1 1 1 0 TcdB toxin N-terminal helical domain zf-C3HC4 PF00097.25 NODE_68201_length_232_cov_55.583756_g60260_i0reverse_frame_1 - 1.9 8.4 9.3 1.2 9.1 2.1 2.3 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF572 PF04502.13 NODE_68199_length_232_cov_56.730964_g60258_i0forward_frame_1 - 3e-12 46.8 2.0 3.3e-12 46.7 2.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF572) ABM PF03992.16 NODE_68196_length_232_cov_63.060914_g60255_i0reverse_frame_1 - 0.19 11.9 0.0 0.27 11.4 0.0 1.2 1 0 0 1 1 1 0 Antibiotic biosynthesis monooxygenase F-box-like PF12937.7 NODE_68196_length_232_cov_63.060914_g60255_i0forward_frame_1 - 0.96 9.4 4.6 0.78 9.7 3.5 1.4 1 1 0 1 1 1 0 F-box-like F-box PF00646.33 NODE_68191_length_232_cov_68.984772_g60250_i0forward_frame_1 - 0.13 12.1 1.1 0.2 11.6 1.1 1.5 1 1 0 1 1 1 0 F-box domain PsbH PF00737.20 NODE_68189_length_232_cov_73.654822_g60248_i0reverse_frame_1 - 0.35 10.6 0.8 0.96 9.2 0.0 1.9 1 1 1 2 2 2 0 Photosystem II 10 kDa phosphoprotein zf-RING-like PF08746.11 NODE_68182_length_232_cov_91.670051_g60241_i0forward_frame_1 - 0.071 13.4 0.7 0.12 12.7 0.2 1.6 2 0 0 2 2 2 0 RING-like domain Glyco_hydro_30 PF02055.16 NODE_68170_length_232_cov_146.994924_g60229_i0forward_frame_1 - 0.1 11.5 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 30 TIM-barrel domain ESM4 PF15952.5 NODE_68153_length_233_cov_0.979798_g60212_i0reverse_frame_1 - 0.25 11.8 4.4 0.26 11.7 4.4 1.0 1 0 0 1 1 1 0 Enhancer of split M4 family PAP2 PF01569.21 NODE_68153_length_233_cov_0.979798_g60212_i0forward_frame_1 - 0.024 14.4 1.7 0.026 14.3 1.7 1.0 1 0 0 1 1 1 0 PAP2 superfamily tRNA-synt_2b PF00587.25 NODE_68151_length_233_cov_1.010101_g60210_i0forward_frame_1 - 0.00014 21.9 0.0 0.00016 21.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) MDMPI_C PF07398.11 NODE_68148_length_233_cov_1.070707_g60207_i0forward_frame_1 - 0.38 11.6 5.9 1.2 10.0 5.9 1.7 1 1 0 1 1 1 0 MDMPI C-terminal domain He_PIG PF05345.12 NODE_68147_length_233_cov_1.090909_g60206_i0reverse_frame_1 - 0.001 19.2 0.2 0.0015 18.7 0.2 1.3 1 0 0 1 1 1 1 Putative Ig domain DUF3038 PF11237.8 NODE_68141_length_233_cov_1.171717_g60200_i0forward_frame_1 - 0.12 12.5 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) Peptidase_C48 PF02902.19 NODE_68137_length_233_cov_1.207071_g60196_i0reverse_frame_1 - 0.037 13.8 0.7 0.044 13.6 0.7 1.0 1 0 0 1 1 1 0 Ulp1 protease family, C-terminal catalytic domain SH3_10 PF17902.1 NODE_68136_length_233_cov_1.207071_g60195_i0reverse_frame_1 - 0.017 15.2 0.3 0.057 13.5 0.1 1.8 2 0 0 2 2 2 0 SH3 domain NMDAR2_C PF10565.9 NODE_68134_length_233_cov_1.207071_g60193_i0reverse_frame_1 - 0.58 9.0 5.2 0.62 8.9 5.2 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus PH_2 PF08458.10 NODE_68129_length_233_cov_1.212121_g60188_i0reverse_frame_1 - 0.11 12.9 0.3 0.13 12.7 0.3 1.1 1 0 0 1 1 1 0 Plant pleckstrin homology-like region MEA1 PF06910.11 NODE_68128_length_233_cov_1.212121_g60187_i0reverse_frame_1 - 0.028 15.0 0.1 0.067 13.8 0.0 1.6 1 1 0 1 1 1 0 Male enhanced antigen 1 (MEA1) DUF2188 PF09954.9 NODE_68125_length_233_cov_1.212121_g60184_i0reverse_frame_1 - 0.01 16.0 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2188) DUF4632 PF15451.6 NODE_68121_length_233_cov_1.227273_g60180_i0forward_frame_1 - 0.0059 16.7 2.1 0.0073 16.3 2.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4632) IQCJ-SCHIP1 PF15157.6 NODE_68120_length_233_cov_1.237374_g60179_i0reverse_frame_1 - 0.084 12.7 0.3 0.09 12.6 0.3 1.1 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif GFRP PF06399.13 NODE_68117_length_233_cov_1.262626_g60176_i0forward_frame_1 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) DTW PF03942.15 NODE_68116_length_233_cov_1.272727_g60175_i0forward_frame_1 - 0.015 15.0 1.3 0.016 14.9 1.3 1.1 1 0 0 1 1 1 0 DTW domain zf-C2HE PF16278.5 NODE_68113_length_233_cov_1.333333_g60172_i0reverse_frame_1 - 0.065 13.7 0.9 0.092 13.2 0.9 1.2 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger RP-C_C PF11800.8 NODE_68109_length_233_cov_1.358586_g60168_i0forward_frame_1 - 1.6 8.7 4.2 1.8 8.6 4.2 1.0 1 0 0 1 1 1 0 Replication protein C C-terminal region PRIMA1 PF16101.5 NODE_68106_length_233_cov_1.363636_g60165_i0reverse_frame_1 - 0.24 11.4 4.9 0.31 11.1 4.9 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 PDT PF00800.18 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.0076 16.1 0.6 0.0087 15.9 0.6 1.0 1 0 0 1 1 1 1 Prephenate dehydratase DUF1451 PF07295.11 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.018 15.1 6.2 0.019 15.0 6.2 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Phage_int_SAM_1 PF02899.17 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.045 14.0 0.8 0.1 12.9 0.4 1.7 1 1 1 2 2 2 0 Phage integrase, N-terminal SAM-like domain FAM184 PF15665.5 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.058 13.2 14.6 0.074 12.8 14.6 1.2 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Topoisom_I_N PF02919.15 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.28 10.7 8.7 0.29 10.6 8.7 1.0 1 0 0 1 1 1 0 Eukaryotic DNA topoisomerase I, DNA binding fragment PACT_coil_coil PF10495.9 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.59 10.7 5.4 1 10.0 5.4 1.4 1 1 0 1 1 1 0 Pericentrin-AKAP-450 domain of centrosomal targeting protein DUF4806 PF16064.5 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.59 10.5 7.5 0.43 10.9 4.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4806) YlqD PF11068.8 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 0.79 10.1 14.6 0.95 9.8 14.6 1.1 1 0 0 1 1 1 0 YlqD protein DUF2347 PF09804.9 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 1.1 8.8 4.9 1.1 8.7 4.9 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2347) Exonuc_VII_L PF02601.15 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 5 6.6 8.9 5.6 6.4 8.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit PHM7_cyt PF14703.6 NODE_68100_length_233_cov_1.414141_g60159_i0forward_frame_1 - 6.2 7.0 10.1 7 6.8 3.1 2.1 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter 7tm_3 PF00003.22 NODE_68095_length_233_cov_1.474747_g60154_i0reverse_frame_1 - 0.019 14.7 2.4 0.02 14.6 2.4 1.0 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR TPR_2 PF07719.17 NODE_68088_length_233_cov_1.545455_g60147_i0forward_frame_1 - 5.3e-07 29.3 2.7 0.0018 18.3 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_68088_length_233_cov_1.545455_g60147_i0forward_frame_1 - 2.7e-05 23.8 6.5 0.00033 20.3 0.1 2.5 3 0 0 3 3 3 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 NODE_68088_length_233_cov_1.545455_g60147_i0forward_frame_1 - 0.0078 15.6 0.3 0.017 14.5 0.0 1.7 2 0 0 2 2 2 1 SHNi-TPR TPR_11 PF13414.6 NODE_68088_length_233_cov_1.545455_g60147_i0forward_frame_1 - 0.054 13.2 0.0 0.054 13.2 0.0 2.4 2 1 1 3 3 3 0 TPR repeat DUF913 PF06025.12 NODE_68087_length_233_cov_1.550505_g60146_i0forward_frame_1 - 0.074 12.0 0.1 0.076 12.0 0.1 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF1127 PF06568.11 NODE_68082_length_233_cov_1.606061_g60141_i0reverse_frame_1 - 0.13 12.0 0.3 0.25 11.1 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1127) FYVE PF01363.21 NODE_68082_length_233_cov_1.606061_g60141_i0forward_frame_1 - 0.013 15.7 4.1 0.022 14.9 4.1 1.3 1 0 0 1 1 1 0 FYVE zinc finger Plasmid_parti PF01672.16 NODE_68080_length_233_cov_1.611111_g60139_i0reverse_frame_1 - 0.013 16.1 0.0 0.018 15.7 0.0 1.2 1 0 0 1 1 1 0 Putative plasmid partition protein RAP1 PF07218.11 NODE_68079_length_233_cov_1.611111_g60138_i0reverse_frame_1 - 1.2 7.3 3.9 1.3 7.2 3.9 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Metallophos PF00149.28 NODE_68074_length_233_cov_1.641414_g60133_i0reverse_frame_1 - 0.053 14.0 0.1 0.056 13.9 0.1 1.0 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase TFIIE_beta PF02186.15 NODE_68073_length_233_cov_1.656566_g60132_i0reverse_frame_1 - 0.026 14.8 0.8 3.3 8.0 0.1 2.2 2 0 0 2 2 2 0 TFIIE beta subunit core domain Spc7 PF08317.11 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.014 14.3 4.3 0.014 14.3 4.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4446 PF14584.6 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.26 11.3 2.5 0.3 11.1 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) Sec20 PF03908.13 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.33 10.9 3.8 0.3 11.0 1.8 1.7 1 1 1 2 2 2 0 Sec20 DUF3450 PF11932.8 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.37 10.1 8.7 0.42 9.9 8.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TRAF_BIRC3_bd PF16673.5 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_1 - 0.53 10.1 5.1 1.3 8.9 1.1 2.1 1 1 1 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DHHC PF01529.20 NODE_68063_length_233_cov_1.762626_g60122_i0reverse_frame_1 - 0.00045 20.3 0.3 0.00047 20.3 0.3 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase CAML PF14963.6 NODE_68061_length_233_cov_1.772727_g60120_i0reverse_frame_1 - 0.29 11.2 2.8 0.34 11.0 2.8 1.1 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand ProQ PF04352.13 NODE_68048_length_233_cov_1.969697_g60107_i0reverse_frame_1 - 0.022 14.6 0.3 0.038 13.9 0.1 1.5 2 0 0 2 2 2 0 ProQ/FINO family Phage_cap_P2 PF05125.12 NODE_68047_length_233_cov_1.974747_g60106_i0reverse_frame_1 - 0.12 11.4 0.2 0.13 11.2 0.2 1.0 1 0 0 1 1 1 0 Phage major capsid protein, P2 family Metallophos PF00149.28 NODE_68032_length_233_cov_2.222222_g60091_i0forward_frame_1 - 0.0011 19.5 0.0 0.0012 19.4 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF5408 PF17402.2 NODE_68023_length_233_cov_2.383838_g60082_i0reverse_frame_1 - 0.0013 18.5 0.2 0.0016 18.3 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5408) RasGEF_N PF00618.20 NODE_68023_length_233_cov_2.383838_g60082_i0forward_frame_1 - 0.032 14.5 0.5 0.032 14.4 0.5 1.1 1 0 0 1 1 1 0 RasGEF N-terminal motif DUF999 PF06198.11 NODE_68018_length_233_cov_2.505051_g60077_i0reverse_frame_1 - 0.022 14.7 1.0 0.026 14.5 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF999) Terminase_GpA PF05876.12 NODE_68014_length_233_cov_2.565657_g60073_i0reverse_frame_1 - 0.1 11.1 1.7 0.11 11.1 1.7 1.1 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) DUF782 PF05614.11 NODE_68008_length_233_cov_2.616162_g60067_i0forward_frame_1 - 0.02 15.3 0.2 0.022 15.1 0.2 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) DDT PF02791.17 NODE_68007_length_233_cov_2.621212_g60066_i0forward_frame_1 - 0.028 14.7 3.0 0.054 13.8 3.0 1.7 1 1 0 1 1 1 0 DDT domain CAMSAP_CC1 PF17095.5 NODE_68003_length_233_cov_2.707071_g60062_i0forward_frame_1 - 0.033 14.0 1.4 0.047 13.5 1.4 1.3 1 0 0 1 1 1 0 Spectrin-binding region of Ca2+-Calmodulin SPICE PF15678.5 NODE_68003_length_233_cov_2.707071_g60062_i0forward_frame_1 - 0.034 13.5 4.4 0.034 13.5 4.4 1.0 1 0 0 1 1 1 0 Centriole duplication and mitotic chromosome congression Chitin_synth_2 PF03142.15 NODE_68000_length_233_cov_2.828283_g60059_i0forward_frame_1 - 6.6e-05 21.7 0.1 7.7e-05 21.5 0.1 1.0 1 0 0 1 1 1 1 Chitin synthase Lamprin PF06403.11 NODE_67997_length_233_cov_3.055556_g60056_i0reverse_frame_1 - 0.00054 19.9 2.0 0.00054 19.9 2.0 2.0 1 1 1 2 2 2 1 Lamprin Phage_TAC_6 PF09550.10 NODE_67997_length_233_cov_3.055556_g60056_i0reverse_frame_1 - 2.9 8.4 4.4 9.3 6.8 0.5 2.6 2 1 1 3 3 3 0 Phage tail assembly chaperone protein, TAC Nepo_coat_C PF03688.14 NODE_67991_length_233_cov_4.272727_g60050_i0reverse_frame_1 - 0.071 13.0 0.0 0.099 12.5 0.0 1.2 1 1 0 1 1 1 0 Nepovirus coat protein, C-terminal domain TT_ORF1 PF02956.14 NODE_67989_length_233_cov_4.848485_g60048_i0reverse_frame_1 - 8.5 4.9 8.3 8.5 4.9 8.3 1.0 1 0 0 1 1 1 0 TT viral orf 1 DUF2284 PF10050.9 NODE_67986_length_233_cov_12.318182_g60045_i0forward_frame_1 - 0.006 16.3 0.7 0.0064 16.2 0.7 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) FAM165 PF14981.6 NODE_67982_length_233_cov_25.257576_g60041_i0forward_frame_1 - 0.49 10.2 5.0 0.17 11.7 1.2 1.9 1 1 1 2 2 2 0 FAM165 family Glyco_hydro_97 PF10566.9 NODE_67977_length_233_cov_34.207071_g60036_i0reverse_frame_1 - 0.015 14.6 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 Glycoside hydrolase 97 Baculo_PEP_C PF04513.12 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.00053 20.0 0.1 0.00063 19.8 0.1 1.1 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus EzrA PF06160.12 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.00055 18.3 4.5 0.0012 17.1 4.4 1.5 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA YtxH PF12732.7 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.00065 20.2 2.2 0.00089 19.8 2.2 1.4 1 1 0 1 1 1 1 YtxH-like protein DUF1640 PF07798.11 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.0011 19.1 3.6 0.0012 18.9 3.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) Apolipoprotein PF01442.18 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.011 15.7 0.2 0.011 15.6 0.2 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF883 PF05957.13 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.017 15.7 0.2 0.02 15.5 0.2 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CCDC-167 PF15188.6 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.017 15.4 1.1 0.03 14.6 1.1 1.4 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF2461 PF09365.10 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.02 14.9 1.9 0.057 13.4 1.0 1.8 1 1 1 2 2 2 0 Conserved hypothetical protein (DUF2461) ATP12 PF07542.11 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.02 15.0 0.2 0.021 14.9 0.2 1.2 1 0 0 1 1 1 0 ATP12 chaperone protein FlaC_arch PF05377.11 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.15 12.5 6.7 0.4 11.1 1.8 2.4 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF1910 PF08928.10 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 0.56 10.2 5.7 0.97 9.5 5.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1910) Osmo_CC PF08946.10 NODE_67975_length_233_cov_34.838384_g60034_i0forward_frame_1 - 3.5 7.9 9.1 2.3 8.5 0.4 2.3 1 1 1 2 2 2 0 Osmosensory transporter coiled coil CIA30 PF08547.12 NODE_67962_length_233_cov_56.040404_g60021_i0forward_frame_1 - 0.088 12.8 0.0 0.1 12.6 0.0 1.0 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) Melibiase PF02065.18 NODE_67956_length_233_cov_62.404040_g60015_i0forward_frame_1 - 0.064 12.2 0.3 0.064 12.2 0.3 1.0 1 0 0 1 1 1 0 Melibiase Ank_2 PF12796.7 NODE_67948_length_233_cov_70.166667_g60007_i0reverse_frame_1 - 0.093 13.3 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Phage_CI_repr PF07022.13 NODE_67948_length_233_cov_70.166667_g60007_i0forward_frame_1 - 0.17 12.0 0.2 0.23 11.5 0.2 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain Yippee-Mis18 PF03226.14 NODE_67944_length_233_cov_78.934343_g60003_i0forward_frame_1 - 5.8e-06 26.5 0.7 6.8e-06 26.2 0.5 1.3 1 1 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly PLAT PF01477.23 NODE_67944_length_233_cov_78.934343_g60003_i0forward_frame_1 - 0.025 15.1 0.2 0.029 14.9 0.2 1.1 1 0 0 1 1 1 0 PLAT/LH2 domain DHHC PF01529.20 NODE_67941_length_233_cov_83.767677_g60000_i0forward_frame_1 - 0.016 15.3 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF5572 PF17733.1 NODE_67930_length_233_cov_158.626263_g59989_i0forward_frame_1 - 0.16 11.9 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5572) RNA_pol_Rpb1_R PF05001.13 NODE_67927_length_233_cov_199.767677_g59986_i0reverse_frame_1 - 0.77 10.2 5.2 0.49 10.8 0.7 2.6 3 0 0 3 3 3 0 RNA polymerase Rpb1 C-terminal repeat MORN PF02493.20 NODE_67926_length_233_cov_218.515152_g59985_i0forward_frame_1 - 4.6e-08 32.5 8.9 7.1e-07 28.8 1.1 2.4 2 0 0 2 2 2 2 MORN repeat CaATP_NAI PF12515.8 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_1 - 0.13 11.9 0.0 11 5.7 0.0 2.1 2 0 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain DUF3932 PF13068.6 NODE_67919_length_233_cov_2693.974747_g59978_i0forward_frame_1 - 0.055 13.8 0.0 0.079 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3932) Osw5 PF17062.5 NODE_67917_length_233_cov_4947.525253_g59976_i0forward_frame_1 - 1.3 9.2 17.2 2.3 8.4 17.2 1.4 1 1 0 1 1 1 0 Outer spore wall 5 Gly-rich_Ago1 PF12764.7 NODE_67915_length_233_cov_28215.984848_g59974_i0reverse_frame_1 - 0.14 13.0 2.8 0.16 12.8 2.8 1.1 1 0 0 1 1 1 0 Glycine-rich region of argonaut Zeta_toxin PF06414.12 NODE_67914_length_233_cov_561730.893939_g59973_i0reverse_frame_1 - 0.032 13.5 0.1 0.034 13.4 0.1 1.0 1 0 0 1 1 1 0 Zeta toxin Cue1_U7BR PF18499.1 NODE_67912_length_234_cov_0.879397_g59971_i0reverse_frame_1 - 0.082 13.0 0.2 0.13 12.3 0.2 1.3 1 0 0 1 1 1 0 Ubc7p-binding region of Cue1 DUF4898 PF16239.5 NODE_67912_length_234_cov_0.879397_g59971_i0reverse_frame_1 - 0.087 12.8 0.8 0.18 11.8 0.5 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4898) Pox_polyA_pol_C PF12629.7 NODE_67901_length_234_cov_1.135678_g59960_i0forward_frame_1 - 0.0081 16.0 0.2 0.01 15.7 0.2 1.1 1 0 0 1 1 1 1 Poxvirus poly(A) polymerase C-terminal domain Ribosomal_S3Ae PF01015.18 NODE_67900_length_234_cov_1.140704_g59959_i0reverse_frame_1 - 0.025 14.2 0.1 0.026 14.1 0.1 1.1 1 0 0 1 1 1 0 Ribosomal S3Ae family AAA_lid_1 PF17857.1 NODE_67896_length_234_cov_1.175879_g59955_i0reverse_frame_1 - 0.053 13.7 0.2 0.059 13.6 0.2 1.1 1 0 0 1 1 1 0 AAA+ lid domain SOCS_box PF07525.16 NODE_67889_length_234_cov_1.206030_g59948_i0forward_frame_1 - 0.0021 18.4 2.4 0.0032 17.8 2.4 1.6 1 1 0 1 1 1 1 SOCS box PRIMA1 PF16101.5 NODE_67876_length_234_cov_1.271357_g59935_i0reverse_frame_1 - 1.3 9.1 7.6 1.6 8.7 7.6 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 HPIP_like PF18524.1 NODE_67876_length_234_cov_1.271357_g59935_i0forward_frame_1 - 0.003 17.3 2.1 0.0053 16.5 2.1 1.4 1 0 0 1 1 1 1 High potential iron-sulfur protein like TMEM189_B_dmain PF10520.9 NODE_67859_length_234_cov_1.402010_g59918_i0forward_frame_1 - 0.071 13.2 0.1 0.073 13.2 0.1 1.1 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain zf-CRD PF17979.1 NODE_67859_length_234_cov_1.402010_g59918_i0forward_frame_1 - 0.13 12.3 5.6 0.19 11.8 5.6 1.2 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions Glyc_hyd_38C_2 PF18230.1 NODE_67854_length_234_cov_1.432161_g59913_i0reverse_frame_1 - 0.16 12.1 0.1 0.2 11.8 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal sub-domain Glyco_transf_6 PF03414.13 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_1 - 0.032 13.0 0.0 0.037 12.8 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 6 DUF4029 PF13221.6 NODE_67853_length_234_cov_1.437186_g59912_i0reverse_frame_1 - 0.097 13.3 0.9 0.13 12.9 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4029) Papo_T_antigen PF02380.15 NODE_67851_length_234_cov_1.462312_g59910_i0reverse_frame_1 - 1.3 9.2 9.8 0.78 9.9 2.2 2.2 2 0 0 2 2 2 0 T-antigen specific domain DUF2250 PF10007.9 NODE_67848_length_234_cov_1.492462_g59907_i0reverse_frame_1 - 0.02 15.0 0.0 0.024 14.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Ku_C PF03730.14 NODE_67848_length_234_cov_1.492462_g59907_i0reverse_frame_1 - 0.056 14.1 0.2 0.061 14.0 0.2 1.1 1 0 0 1 1 1 0 Ku70/Ku80 C-terminal arm NADH-G_4Fe-4S_3 PF10588.9 NODE_67847_length_234_cov_1.497487_g59906_i0forward_frame_1 - 6 6.5 6.1 16 5.2 6.1 1.8 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region tRNA-synt_1b PF00579.25 NODE_67846_length_234_cov_1.502513_g59905_i0forward_frame_1 - 8.6e-14 51.5 0.0 8.8e-14 51.5 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) FoP_duplication PF13865.6 NODE_67844_length_234_cov_1.527638_g59903_i0forward_frame_1 - 0.97 10.0 6.6 0.54 10.9 0.5 2.0 1 1 1 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 Glt_symporter PF03616.14 NODE_67833_length_234_cov_1.603015_g59892_i0reverse_frame_1 - 0.0099 14.6 1.2 0.012 14.4 1.2 1.0 1 0 0 1 1 1 1 Sodium/glutamate symporter Strabismus PF06638.11 NODE_67833_length_234_cov_1.603015_g59892_i0reverse_frame_1 - 0.081 11.6 2.5 0.09 11.4 2.5 1.0 1 0 0 1 1 1 0 Strabismus protein Glyco_hydro_3 PF00933.21 NODE_67828_length_234_cov_1.628141_g59887_i0reverse_frame_1 - 0.16 11.4 0.1 0.17 11.2 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 N terminal domain CheR PF01739.18 NODE_67828_length_234_cov_1.628141_g59887_i0forward_frame_1 - 5.7e-26 91.2 0.0 5.9e-26 91.2 0.0 1.0 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain DUF4454 PF14628.6 NODE_67824_length_234_cov_1.648241_g59883_i0reverse_frame_1 - 0.049 13.5 0.1 0.051 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4454) CDC4_D PF16856.5 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_1 - 0.079 12.8 0.1 0.12 12.3 0.1 1.3 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain TEX29 PF15839.5 NODE_67819_length_234_cov_1.743719_g59878_i0reverse_frame_1 - 0.75 10.4 6.5 3.6 8.3 0.4 2.1 1 1 1 2 2 2 0 Testis-expressed sequence 29 protein Folate_rec PF03024.14 NODE_67816_length_234_cov_1.753769_g59875_i0reverse_frame_1 - 0.0068 16.3 9.5 0.0084 16.0 9.5 1.2 1 0 0 1 1 1 1 Folate receptor family SelR PF01641.18 NODE_67816_length_234_cov_1.753769_g59875_i0reverse_frame_1 - 0.02 15.0 2.3 0.45 10.6 0.4 2.1 1 1 1 2 2 2 0 SelR domain DUF3561 PF12084.8 NODE_67812_length_234_cov_1.798995_g59871_i0reverse_frame_1 - 0.032 14.2 4.1 0.037 14.0 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3561) DUF773 PF05600.12 NODE_67809_length_234_cov_1.829146_g59868_i0reverse_frame_1 - 0.018 13.8 0.2 0.02 13.6 0.2 1.1 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 Arm PF00514.23 NODE_67807_length_234_cov_1.834171_g59866_i0reverse_frame_1 - 0.17 12.0 1.9 0.25 11.5 0.2 2.1 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat LRV_FeS PF05484.11 NODE_67799_length_234_cov_1.929648_g59858_i0reverse_frame_1 - 0.0096 15.9 0.6 0.017 15.2 0.6 1.3 1 0 0 1 1 1 1 LRV protein FeS4 cluster O_Spanin_T7 PF17531.2 NODE_67793_length_234_cov_2.000000_g59852_i0reverse_frame_1 - 0.16 12.1 0.1 0.27 11.3 0.1 1.3 1 0 0 1 1 1 0 outer-membrane spanin sub-unit Phage_connector PF05352.12 NODE_67793_length_234_cov_2.000000_g59852_i0forward_frame_1 - 0.04 13.3 0.2 0.043 13.2 0.2 1.1 1 0 0 1 1 1 0 Phage Connector (GP10) Myb_DNA-binding PF00249.31 NODE_67792_length_234_cov_2.030151_g59851_i0reverse_frame_1 - 3.1e-19 68.9 6.6 5.2e-13 49.0 0.2 2.0 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_67792_length_234_cov_2.030151_g59851_i0reverse_frame_1 - 7.5e-17 61.3 3.8 2.1e-14 53.5 1.2 2.0 1 1 1 2 2 2 2 Myb-like DNA-binding domain TBPIP PF07106.13 NODE_67792_length_234_cov_2.030151_g59851_i0reverse_frame_1 - 0.16 11.9 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain Myb_DNA-bind_4 PF13837.6 NODE_67792_length_234_cov_2.030151_g59851_i0reverse_frame_1 - 0.19 12.1 2.8 0.84 10.1 0.8 2.3 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain Ion_trans PF00520.31 NODE_67791_length_234_cov_2.035176_g59850_i0forward_frame_1 - 2.9e-11 43.1 4.2 3.2e-11 42.9 4.2 1.0 1 0 0 1 1 1 1 Ion transport protein DUF5078 PF16877.5 NODE_67790_length_234_cov_2.045226_g59849_i0forward_frame_1 - 0.064 13.7 0.1 0.073 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5078) TFIIA_gamma_N PF02268.16 NODE_67785_length_234_cov_2.155779_g59844_i0reverse_frame_1 - 0.035 14.1 0.9 0.047 13.7 0.1 1.6 2 0 0 2 2 2 0 Transcription initiation factor IIA, gamma subunit, helical domain Pacifastin_I PF05375.13 NODE_67783_length_234_cov_2.175879_g59842_i0reverse_frame_1 - 0.75 9.6 6.0 0.85 9.4 0.4 2.6 2 2 0 2 2 2 0 Pacifastin inhibitor (LCMII) MerB PF03243.15 NODE_67782_length_234_cov_2.185930_g59841_i0reverse_frame_1 - 0.016 15.4 0.0 0.022 14.9 0.0 1.1 1 0 0 1 1 1 0 Alkylmercury lyase LRR_6 PF13516.6 NODE_67779_length_234_cov_2.231156_g59838_i0forward_frame_1 - 2.1e-05 24.2 1.1 0.0056 16.6 0.1 2.3 2 0 0 2 2 2 2 Leucine Rich repeat LRR_4 PF12799.7 NODE_67779_length_234_cov_2.231156_g59838_i0forward_frame_1 - 0.00038 20.8 1.1 0.00061 20.1 1.1 1.4 1 0 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_67779_length_234_cov_2.231156_g59838_i0forward_frame_1 - 0.0013 19.0 0.7 2.1 9.2 0.0 2.4 2 0 0 2 2 2 2 Leucine Rich Repeat LRR_8 PF13855.6 NODE_67779_length_234_cov_2.231156_g59838_i0forward_frame_1 - 0.019 14.7 1.6 0.11 12.3 1.6 2.0 1 1 0 1 1 1 0 Leucine rich repeat P4Ha_N PF08336.11 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.0011 19.0 2.5 0.0011 18.9 2.5 1.1 1 0 0 1 1 1 1 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region PKcGMP_CC PF16808.5 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.009 15.8 0.1 0.009 15.8 0.1 2.3 3 0 0 3 3 3 1 Coiled-coil N-terminus of cGMP-dependent protein kinase FAM76 PF16046.5 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.036 13.4 4.6 0.036 13.4 4.6 1.0 1 0 0 1 1 1 0 FAM76 protein DUF641 PF04859.12 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.052 13.9 3.4 0.068 13.5 3.4 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF16 PF01519.16 NODE_67774_length_234_cov_2.331658_g59833_i0forward_frame_1 - 0.32 11.5 5.0 0.38 11.2 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF16 MmgE_PrpD PF03972.14 NODE_67768_length_234_cov_2.452261_g59827_i0reverse_frame_1 - 5.8e-20 71.3 0.1 6.2e-20 71.2 0.1 1.0 1 0 0 1 1 1 1 MmgE/PrpD family PsiB PF06290.11 NODE_67765_length_234_cov_2.482412_g59824_i0reverse_frame_1 - 0.13 11.7 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) DUF2027 PF09640.10 NODE_67763_length_234_cov_2.567839_g59822_i0forward_frame_1 - 0.017 14.7 0.1 0.019 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2027) DUF3452 PF11934.8 NODE_67758_length_234_cov_2.763819_g59817_i0reverse_frame_1 - 0.0025 17.4 1.8 0.0041 16.7 1.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3452) Patatin PF01734.22 NODE_67756_length_234_cov_2.849246_g59815_i0reverse_frame_1 - 0.0091 16.2 0.0 0.0097 16.1 0.0 1.0 1 0 0 1 1 1 1 Patatin-like phospholipase Usher PF00577.20 NODE_67755_length_234_cov_2.899497_g59814_i0reverse_frame_1 - 1.7e-25 89.9 0.5 1.9e-25 89.8 0.5 1.0 1 0 0 1 1 1 1 Outer membrane usher protein Kei1 PF08552.11 NODE_67755_length_234_cov_2.899497_g59814_i0forward_frame_1 - 0.077 12.9 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 Sugar_tr PF00083.24 NODE_67754_length_234_cov_2.909548_g59813_i0reverse_frame_1 - 6.2e-07 28.6 0.0 6.6e-07 28.5 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter SpoVIF PF14069.6 NODE_67754_length_234_cov_2.909548_g59813_i0reverse_frame_1 - 0.011 15.5 0.4 0.016 15.0 0.4 1.2 1 0 0 1 1 1 0 Stage VI sporulation protein F S_4TM PF18159.1 NODE_67754_length_234_cov_2.909548_g59813_i0reverse_frame_1 - 0.044 13.1 0.0 0.047 13.0 0.0 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF2873 PF11395.8 NODE_67753_length_234_cov_2.949749_g59812_i0reverse_frame_1 - 0.038 13.9 3.1 0.038 13.9 3.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) DUF3981 PF13139.6 NODE_67751_length_234_cov_2.984925_g59810_i0reverse_frame_1 - 0.026 14.9 1.9 0.027 14.8 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3981) Fe_dep_repr_C PF02742.15 NODE_67751_length_234_cov_2.984925_g59810_i0forward_frame_1 - 0.057 13.5 0.2 0.074 13.1 0.2 1.2 1 0 0 1 1 1 0 Iron dependent repressor, metal binding and dimerisation domain Fibrinogen_aC PF12160.8 NODE_67748_length_234_cov_3.231156_g59807_i0reverse_frame_1 - 0.049 13.5 0.1 0.084 12.7 0.1 1.3 1 0 0 1 1 1 0 Fibrinogen alpha C domain Tegument_dsDNA PF12818.7 NODE_67742_length_234_cov_3.733668_g59801_i0reverse_frame_1 - 0.057 12.5 0.0 0.057 12.5 0.0 1.0 1 0 0 1 1 1 0 dsDNA viral tegument protein DUF918 PF06033.11 NODE_67737_length_234_cov_3.969849_g59796_i0reverse_frame_1 - 0.036 14.1 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF918) DUF2607 PF10795.9 NODE_67736_length_234_cov_5.085427_g59795_i0reverse_frame_1 - 0.012 15.7 0.4 0.015 15.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2607) Viral_Beta_CD PF04530.12 NODE_67736_length_234_cov_5.085427_g59795_i0reverse_frame_1 - 0.48 10.7 4.0 0.81 10.0 4.0 1.4 1 1 0 1 1 1 0 Viral Beta C/D like family DUF2076 PF09849.9 NODE_67733_length_234_cov_8.814070_g59792_i0reverse_frame_1 - 0.0097 16.0 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) PAR1 PF06521.11 NODE_67731_length_234_cov_19.467337_g59790_i0reverse_frame_1 - 0.13 11.9 0.1 0.14 11.8 0.1 1.1 1 0 0 1 1 1 0 PAR1 protein TolA_bind_tri PF16331.5 NODE_67728_length_234_cov_30.356784_g59787_i0forward_frame_1 - 0.008 16.2 0.0 0.0098 15.9 0.0 1.1 1 0 0 1 1 1 1 TolA binding protein trimerisation Ins_P5_2-kin PF06090.12 NODE_67727_length_234_cov_30.432161_g59786_i0forward_frame_1 - 0.0022 17.5 0.1 0.0022 17.5 0.1 1.1 1 0 0 1 1 1 1 Inositol-pentakisphosphate 2-kinase Fun_ATP-synt_8 PF05933.13 NODE_67726_length_234_cov_34.366834_g59785_i0forward_frame_1 - 0.16 12.1 0.1 0.16 12.1 0.1 2.2 2 0 0 2 2 2 0 Fungal ATP synthase protein 8 (A6L) PTCRA PF15028.6 NODE_67720_length_234_cov_40.698492_g59779_i0reverse_frame_1 - 0.13 12.0 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Pre-T-cell antigen receptor POTRA_2 PF08479.11 NODE_67720_length_234_cov_40.698492_g59779_i0forward_frame_1 - 0.0034 17.2 0.0 0.0038 17.0 0.0 1.3 1 1 0 1 1 1 1 POTRA domain, ShlB-type TMEM132D_C PF15706.5 NODE_67717_length_234_cov_44.819095_g59776_i0reverse_frame_1 - 1.8 8.4 5.4 2.2 8.1 5.4 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TipE PF16972.5 NODE_67717_length_234_cov_44.819095_g59776_i0reverse_frame_1 - 3.7 6.6 5.7 3.8 6.6 5.7 1.1 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE MORN PF02493.20 NODE_67717_length_234_cov_44.819095_g59776_i0forward_frame_1 - 0.009 15.9 0.1 0.009 15.9 0.1 2.3 2 0 0 2 2 2 1 MORN repeat ERK-JNK_inhib PF15002.6 NODE_67703_length_234_cov_53.989950_g59762_i0forward_frame_1 - 2.7 7.7 10.2 3.3 7.4 10.2 1.1 1 0 0 1 1 1 0 ERK and JNK pathways, inhibitor Cupin_6 PF12852.7 NODE_67702_length_234_cov_55.537688_g59761_i0reverse_frame_1 - 0.16 11.6 0.1 0.2 11.4 0.1 1.1 1 0 0 1 1 1 0 Cupin SHIPPO-rpt PF07004.12 NODE_67701_length_234_cov_57.035176_g59760_i0reverse_frame_1 - 0.011 16.7 0.2 0.024 15.5 0.2 1.9 1 1 0 1 1 1 0 Sperm-tail PG-rich repeat Hum_adeno_E3A PF05393.11 NODE_67694_length_234_cov_64.125628_g59753_i0forward_frame_1 - 0.043 13.8 0.2 0.05 13.6 0.2 1.2 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein TFIID-18kDa PF02269.16 NODE_67694_length_234_cov_64.125628_g59753_i0forward_frame_1 - 0.15 12.1 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit DUF3439 PF11921.8 NODE_67691_length_234_cov_69.145729_g59750_i0reverse_frame_1 - 0.0063 16.5 10.8 0.0076 16.2 10.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3439) SSP160 PF06933.11 NODE_67691_length_234_cov_69.145729_g59750_i0reverse_frame_1 - 0.064 11.5 8.9 0.068 11.4 8.9 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF802 PF05650.11 NODE_67688_length_234_cov_79.030151_g59747_i0reverse_frame_1 - 0.055 13.9 0.1 0.083 13.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF802) NDC10_II PF16787.5 NODE_67687_length_234_cov_80.185930_g59746_i0reverse_frame_1 - 0.063 12.3 0.6 0.074 12.1 0.6 1.0 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit, domain 2 Flu_C_NS2 PF03555.14 NODE_67686_length_234_cov_82.728643_g59745_i0forward_frame_1 - 0.01 15.9 0.2 0.017 15.3 0.2 1.4 1 0 0 1 1 1 0 Influenza C non-structural protein (NS2) DUF755 PF05501.11 NODE_67680_length_234_cov_118.457286_g59739_i0reverse_frame_1 - 0.0079 16.5 6.9 0.0087 16.3 6.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF755) Circo_capsid PF02443.15 NODE_67678_length_234_cov_124.477387_g59737_i0reverse_frame_1 - 0.65 9.5 6.2 0.66 9.5 6.2 1.0 1 0 0 1 1 1 0 Circovirus capsid protein Dishevelled PF02377.15 NODE_67678_length_234_cov_124.477387_g59737_i0reverse_frame_1 - 8.9 6.7 8.5 7 7.1 7.1 1.6 1 1 1 2 2 2 0 Dishevelled specific domain Adeno_E3_CR2 PF02439.15 NODE_67677_length_234_cov_126.728643_g59736_i0forward_frame_1 - 0.012 15.3 3.2 0.022 14.5 3.2 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 NitrOD1 PF18549.1 NODE_67672_length_234_cov_265.984925_g59731_i0forward_frame_1 - 0.087 12.8 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 Nitrosopumilus output domain 1 DUF2678 PF10856.8 NODE_67668_length_234_cov_515.864322_g59727_i0reverse_frame_1 - 0.083 12.8 1.4 0.1 12.5 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) SLC3A2_N PF16028.5 NODE_67667_length_234_cov_971.366834_g59726_i0reverse_frame_1 - 1 8.9 2.6 3 7.5 0.0 2.0 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus EBP PF05241.12 NODE_67663_length_234_cov_3413.236181_g59722_i0reverse_frame_1 - 0.44 10.0 4.8 0.66 9.4 4.8 1.2 1 0 0 1 1 1 0 Emopamil binding protein Curto_V3 PF07436.11 NODE_67658_length_235_cov_0.790000_g59717_i0forward_frame_3 - 0.0057 17.0 0.2 0.0074 16.7 0.2 1.1 1 0 0 1 1 1 1 Curtovirus V3 protein zf-H3C2 PF16721.5 NODE_67656_length_235_cov_0.800000_g59715_i0reverse_frame_3 - 0.12 12.7 1.3 0.21 12.0 0.2 1.8 1 1 1 2 2 2 0 Zinc-finger like, probable DNA-binding DUF1264 PF06884.11 NODE_67655_length_235_cov_0.820000_g59714_i0forward_frame_3 - 0.017 14.7 0.1 0.021 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1264) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks343.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks343.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks343.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks343.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:21:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Macscav_rec PF03523.13 NODE_67653_length_235_cov_0.915000_g59712_i0forward_frame_3 - 0.014 15.3 0.1 0.027 14.4 0.1 1.5 1 0 0 1 1 1 0 Macrophage scavenger receptor Seipin PF06775.14 NODE_67652_length_235_cov_0.925000_g59711_i0forward_frame_2 - 0.052 13.6 0.5 0.078 13.1 0.3 1.4 1 1 1 2 2 2 0 Putative adipose-regulatory protein (Seipin) PNKP-ligase_C PF16536.5 NODE_67651_length_235_cov_0.940000_g59710_i0forward_frame_3 - 0.0052 17.0 0.0 0.0064 16.7 0.0 1.1 1 0 0 1 1 1 1 PNKP adenylyltransferase domain, C-terminal region TAFA PF12020.8 NODE_67651_length_235_cov_0.940000_g59710_i0forward_frame_3 - 0.075 13.5 0.1 0.083 13.4 0.1 1.2 1 0 0 1 1 1 0 TAFA family Cep57_CLD_2 PF14197.6 NODE_67645_length_235_cov_0.995000_g59704_i0forward_frame_3 - 0.022 14.8 0.2 0.03 14.4 0.2 1.1 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 RILP PF11461.8 NODE_67645_length_235_cov_0.995000_g59704_i0forward_frame_3 - 0.03 14.6 0.2 0.065 13.5 0.1 1.7 1 1 1 2 2 2 0 Rab interacting lysosomal protein MPS2 PF17060.5 NODE_67645_length_235_cov_0.995000_g59704_i0forward_frame_3 - 0.17 11.1 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 zf-met PF12874.7 NODE_67644_length_235_cov_1.000000_g59703_i0reverse_frame_3 - 0.95 10.0 3.7 4.7 7.7 0.0 3.1 3 1 1 4 4 4 0 Zinc-finger of C2H2 type SAS-6_N PF16531.5 NODE_67644_length_235_cov_1.000000_g59703_i0reverse_frame_2 - 1.2e-09 38.6 0.4 1.3e-09 38.5 0.4 1.1 1 0 0 1 1 1 1 Centriolar protein SAS N-terminal Csa1 PF06023.12 NODE_67642_length_235_cov_1.000000_g59701_i0forward_frame_3 - 0.16 11.3 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated exonuclease Csa1 Macoilin PF09726.9 NODE_67642_length_235_cov_1.000000_g59701_i0forward_frame_2 - 0.29 9.7 0.6 0.32 9.5 0.6 1.0 1 0 0 1 1 1 0 Macoilin family RINGv PF12906.7 NODE_67641_length_235_cov_1.015000_g59700_i0reverse_frame_3 - 0.0091 16.1 3.4 0.028 14.5 3.4 1.8 1 1 0 1 1 1 1 RING-variant domain Herpes_UL73 PF03554.13 NODE_67639_length_235_cov_1.035000_g59698_i0forward_frame_3 - 4.9 7.2 8.4 7 6.7 2.4 2.2 1 1 1 2 2 2 0 UL73 viral envelope glycoprotein Oleosin PF01277.17 NODE_67638_length_235_cov_1.055000_g59697_i0reverse_frame_2 - 0.074 12.8 0.1 0.11 12.2 0.0 1.3 1 1 0 1 1 1 0 Oleosin Alpha-2-MRAP_C PF06401.11 NODE_67636_length_235_cov_1.110000_g59695_i0forward_frame_2 - 0.0067 16.4 1.0 0.0072 16.3 1.0 1.0 1 0 0 1 1 1 1 Alpha-2-macroglobulin RAP, C-terminal domain Pox_F16 PF04708.12 NODE_67634_length_235_cov_1.145000_g59693_i0reverse_frame_2 - 0.037 13.5 0.1 0.04 13.4 0.1 1.1 1 0 0 1 1 1 0 Poxvirus F16 protein DUF4085 PF13315.6 NODE_67634_length_235_cov_1.145000_g59693_i0forward_frame_3 - 0.016 14.9 0.2 0.017 14.8 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4085) Na_H_Exchanger PF00999.21 NODE_67633_length_235_cov_1.150000_g59692_i0forward_frame_3 - 2.5e-09 36.4 0.9 2.5e-09 36.4 0.9 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Ntox35 PF15534.6 NODE_67630_length_235_cov_1.170000_g59689_i0reverse_frame_2 - 0.082 13.4 0.1 0.1 13.1 0.1 1.2 1 0 0 1 1 1 0 Bacterial toxin 35 DUF818 PF05677.12 NODE_67630_length_235_cov_1.170000_g59689_i0forward_frame_3 - 0.095 11.6 0.4 0.093 11.7 0.4 1.0 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) T6_Ig_like PF18002.1 NODE_67628_length_235_cov_1.175000_g59687_i0reverse_frame_3 - 0.021 14.7 0.1 0.022 14.7 0.1 1.0 1 0 0 1 1 1 0 T6 antigen Ig like domain MutS_I PF01624.20 NODE_67628_length_235_cov_1.175000_g59687_i0reverse_frame_3 - 0.06 13.6 0.1 0.072 13.3 0.1 1.2 1 0 0 1 1 1 0 MutS domain I Mic1 PF07035.12 NODE_67628_length_235_cov_1.175000_g59687_i0forward_frame_2 - 0.022 14.5 0.4 0.024 14.4 0.4 1.1 1 0 0 1 1 1 0 Colon cancer-associated protein Mic1-like PPR_3 PF13812.6 NODE_67626_length_235_cov_1.185000_g59685_i0forward_frame_2 - 0.093 12.8 0.0 0.4 10.8 0.0 1.8 1 1 0 1 1 1 0 Pentatricopeptide repeat domain CAF-1_p150 PF11600.8 NODE_67624_length_235_cov_1.195000_g59683_i0reverse_frame_2 - 6.4 6.5 35.7 6.7 6.4 35.7 1.0 1 0 0 1 1 1 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal Chordopox_RPO7 PF05864.12 NODE_67624_length_235_cov_1.195000_g59683_i0forward_frame_2 - 0.096 13.0 1.5 0.13 12.5 1.5 1.2 1 0 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Agouti PF05039.12 NODE_67620_length_235_cov_1.200000_g59679_i0forward_frame_3 - 0.31 11.8 4.1 0.43 11.3 4.1 1.2 1 0 0 1 1 1 0 Agouti protein Sugar_tr PF00083.24 NODE_67619_length_235_cov_1.200000_g59678_i0forward_frame_3 - 0.0058 15.5 0.2 0.0061 15.5 0.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2079 PF09852.9 NODE_67619_length_235_cov_1.200000_g59678_i0forward_frame_3 - 0.028 13.3 0.2 0.031 13.1 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) DUF772 PF05598.11 NODE_67617_length_235_cov_1.220000_g59676_i0reverse_frame_3 - 0.039 14.0 0.0 0.048 13.7 0.0 1.1 1 0 0 1 1 1 0 Transposase domain (DUF772) HAMP_N3 PF18575.1 NODE_67617_length_235_cov_1.220000_g59676_i0reverse_frame_2 - 0.0073 15.9 0.0 3.7 7.2 0.0 2.2 2 0 0 2 2 2 2 HAMP N-terminal domain 3 MRAP PF15183.6 NODE_67614_length_235_cov_1.245000_g59673_i0forward_frame_2 - 0.034 14.1 0.0 0.039 13.9 0.0 1.1 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family UL45 PF05473.12 NODE_67613_length_235_cov_1.255000_g59672_i0reverse_frame_3 - 0.027 14.1 0.3 0.031 13.9 0.3 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF5383 PF17355.2 NODE_67613_length_235_cov_1.255000_g59672_i0reverse_frame_3 - 0.091 13.1 0.1 0.097 13.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Vma12 PF11712.8 NODE_67613_length_235_cov_1.255000_g59672_i0reverse_frame_3 - 0.34 11.0 1.7 0.38 10.8 1.7 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase TMEM154 PF15102.6 NODE_67612_length_235_cov_1.260000_g59671_i0forward_frame_2 - 0.011 15.7 0.8 0.013 15.4 0.8 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF1147 PF06615.11 NODE_67608_length_235_cov_1.305000_g59667_i0reverse_frame_2 - 0.18 11.9 0.3 6.9 6.8 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1147) DUF2370 PF10176.9 NODE_67606_length_235_cov_1.330000_g59665_i0reverse_frame_2 - 0.025 14.2 1.0 0.029 14.0 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) RE_AccI PF09545.10 NODE_67606_length_235_cov_1.330000_g59665_i0forward_frame_2 - 0.03 13.3 0.5 0.032 13.2 0.5 1.0 1 0 0 1 1 1 0 AccI restriction endonuclease CAP_N PF01213.19 NODE_67604_length_235_cov_1.350000_g59663_i0forward_frame_2 - 0.039 13.4 1.2 0.045 13.2 1.2 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal IBV_3A PF03617.13 NODE_67603_length_235_cov_1.350000_g59662_i0reverse_frame_2 - 0.082 12.9 1.6 0.14 12.1 1.6 1.4 1 0 0 1 1 1 0 IBV 3A protein Prokineticin PF06607.11 NODE_67599_length_235_cov_1.395000_g59658_i0reverse_frame_2 - 0.0054 17.0 0.1 0.0058 16.9 0.1 1.1 1 0 0 1 1 1 1 Prokineticin DUF1431 PF07248.12 NODE_67598_length_235_cov_1.420000_g59657_i0reverse_frame_3 - 0.081 13.2 7.1 0.094 13.0 7.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1431) DUF4446 PF14584.6 NODE_67598_length_235_cov_1.420000_g59657_i0reverse_frame_3 - 0.17 11.9 2.8 0.19 11.7 2.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) YqfQ PF14181.6 NODE_67598_length_235_cov_1.420000_g59657_i0reverse_frame_2 - 5.1 7.3 8.9 5.8 7.1 8.9 1.1 1 0 0 1 1 1 0 YqfQ-like protein Ac76 PF05814.11 NODE_67598_length_235_cov_1.420000_g59657_i0forward_frame_3 - 3.8 7.6 10.3 11 6.2 10.1 1.8 1 1 1 2 2 2 0 Orf76 (Ac76) CPP1-like PF11833.8 NODE_67598_length_235_cov_1.420000_g59657_i0forward_frame_2 - 2 8.0 8.3 2.2 7.9 8.3 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Filament_head PF04732.14 NODE_67593_length_235_cov_1.445000_g59652_i0forward_frame_2 - 0.076 13.9 2.3 0.09 13.7 0.7 1.7 2 0 0 2 2 2 0 Intermediate filament head (DNA binding) region Presenilin PF01080.17 NODE_67589_length_235_cov_1.470000_g59648_i0reverse_frame_2 - 3.2 6.4 7.0 3.2 6.4 7.0 1.0 1 0 0 1 1 1 0 Presenilin Defensin_1 PF00323.19 NODE_67589_length_235_cov_1.470000_g59648_i0forward_frame_3 - 0.0099 16.4 3.5 0.0099 16.4 3.5 3.0 3 1 0 3 3 3 1 Mammalian defensin DUF3796 PF12676.7 NODE_67587_length_235_cov_1.495000_g59646_i0reverse_frame_3 - 2.3 8.7 10.8 0.21 12.0 6.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3796) SUIM_assoc PF16619.5 NODE_67587_length_235_cov_1.495000_g59646_i0forward_frame_3 - 0.00042 20.3 7.4 0.015 15.3 7.4 2.0 1 1 0 1 1 1 1 Unstructured region C-term to UIM in Ataxin3 CSN7a_helixI PF18392.1 NODE_67586_length_235_cov_1.500000_g59645_i0reverse_frame_3 - 0.093 12.7 0.2 0.13 12.2 0.2 1.3 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain Ank_2 PF12796.7 NODE_67586_length_235_cov_1.500000_g59645_i0forward_frame_3 - 0.15 12.7 0.0 0.24 12.0 0.0 1.4 1 1 0 1 1 1 0 Ankyrin repeats (3 copies) Pox_L3_FP4 PF03339.14 NODE_67585_length_235_cov_1.515000_g59644_i0reverse_frame_3 - 0.086 11.8 0.2 0.091 11.7 0.2 1.0 1 0 0 1 1 1 0 Poxvirus L3/FP4 protein Kinesin PF00225.23 NODE_67584_length_235_cov_1.520000_g59643_i0forward_frame_2 - 2.6e-15 56.2 0.2 2.7e-15 56.1 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_67584_length_235_cov_1.520000_g59643_i0forward_frame_2 - 0.00014 21.8 0.1 0.00018 21.5 0.1 1.2 1 0 0 1 1 1 1 Microtubule binding DUF5402 PF17393.2 NODE_67584_length_235_cov_1.520000_g59643_i0forward_frame_2 - 0.095 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5402) DUF2688 PF10892.8 NODE_67582_length_235_cov_1.545000_g59641_i0forward_frame_3 - 0.15 11.6 2.1 0.21 11.1 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) NADH_4Fe-4S PF10589.9 NODE_67582_length_235_cov_1.545000_g59641_i0forward_frame_2 - 0.06 13.4 0.1 0.063 13.4 0.1 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CREPT PF16566.5 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.03 14.5 4.6 0.04 14.1 4.6 1.2 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour ZnuA PF01297.17 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.037 13.4 0.9 0.038 13.4 0.9 1.2 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic Phage_Mu_Gam PF07352.12 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.048 13.6 4.3 0.057 13.3 4.3 1.1 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein DUF1151 PF06625.11 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.055 13.4 6.0 0.061 13.3 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1151) Prefoldin_2 PF01920.20 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.064 13.2 1.6 0.064 13.2 1.6 2.1 1 1 0 2 2 2 0 Prefoldin subunit DUF4337 PF14235.6 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.072 13.2 3.5 0.08 13.1 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) CdvA PF18822.1 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.074 12.9 9.1 0.05 13.4 7.2 1.6 1 1 0 1 1 1 0 CdvA-like coiled-coil domain Snapin_Pallidin PF14712.6 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.11 12.9 5.9 0.14 12.6 5.9 1.2 1 0 0 1 1 1 0 Snapin/Pallidin Atg14 PF10186.9 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.16 11.1 5.4 0.17 10.9 5.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF2203 PF09969.9 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.16 12.7 1.9 0.18 12.5 1.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) CALCOCO1 PF07888.11 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.19 10.6 10.0 0.31 9.9 10.0 1.3 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like PI3K_P85_iSH2 PF16454.5 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.31 10.6 10.7 0.98 9.0 4.5 2.0 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF1003 PF06210.11 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.46 10.6 5.3 0.51 10.5 4.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) FapA PF03961.13 NODE_67581_length_235_cov_1.550000_g59640_i0reverse_frame_3 - 0.84 8.2 7.3 0.93 8.0 7.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A TCR_zetazeta PF11628.8 NODE_67581_length_235_cov_1.550000_g59640_i0forward_frame_3 - 0.43 10.3 5.8 0.77 9.5 5.8 1.5 1 0 0 1 1 1 0 T-cell surface glycoprotein CD3 zeta chain Neisseria_TspB PF05616.13 NODE_67580_length_235_cov_1.565000_g59639_i0forward_frame_2 - 0.1 11.1 0.3 0.1 11.1 0.3 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Pathogen_betaC1 PF09593.10 NODE_67579_length_235_cov_1.570000_g59638_i0reverse_frame_2 - 0.029 14.3 0.1 0.052 13.5 0.1 1.5 1 1 0 1 1 1 0 Beta-satellite pathogenicity beta C1 protein Caveolin PF01146.17 NODE_67577_length_235_cov_1.590000_g59636_i0reverse_frame_3 - 5.7 6.9 6.3 6.4 6.7 6.3 1.1 1 0 0 1 1 1 0 Caveolin DUF2149 PF09919.9 NODE_67574_length_235_cov_1.600000_g59633_i0forward_frame_2 - 0.063 13.5 0.4 0.11 12.8 0.4 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) DEK_C PF08766.11 NODE_67573_length_235_cov_1.620000_g59632_i0reverse_frame_3 - 0.036 14.0 0.8 0.069 13.1 0.8 1.4 1 0 0 1 1 1 0 DEK C terminal domain Tn7_Tnp_TnsA_C PF08721.11 NODE_67573_length_235_cov_1.620000_g59632_i0reverse_frame_2 - 0.057 14.1 0.8 0.064 13.9 0.8 1.1 1 0 0 1 1 1 0 TnsA endonuclease C terminal ABC_tran PF00005.27 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 4e-10 40.3 0.0 5.2e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.00018 21.2 0.0 0.00026 20.7 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.002 18.0 0.1 0.0027 17.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.003 17.5 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.0032 18.0 0.0 0.0042 17.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_27 PF13514.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.01 15.4 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.064 13.0 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.11 12.1 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.14 11.5 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain DUF2813 PF11398.8 NODE_67570_length_235_cov_1.645000_g59629_i0reverse_frame_3 - 0.15 11.3 0.1 0.21 10.8 0.1 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2813) CsoS2_M PF12288.8 NODE_67569_length_235_cov_1.650000_g59628_i0reverse_frame_3 - 0.096 12.1 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Carboxysome shell peptide mid-region YniB PF14002.6 NODE_67569_length_235_cov_1.650000_g59628_i0forward_frame_3 - 1.6e-13 50.7 0.4 5e-13 49.2 0.3 1.7 2 0 0 2 2 2 1 YniB-like protein RseC_MucC PF04246.12 NODE_67569_length_235_cov_1.650000_g59628_i0forward_frame_3 - 0.014 15.4 0.2 0.015 15.2 0.2 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Acyl-CoA_dh_M PF02770.19 NODE_67567_length_235_cov_1.685000_g59626_i0reverse_frame_2 - 0.11 12.7 0.1 0.18 12.0 0.1 1.5 1 1 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain S-AdoMet_synt_M PF02772.16 NODE_67565_length_235_cov_1.700000_g59624_i0reverse_frame_3 - 0.087 13.1 0.2 0.1 12.9 0.2 1.0 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, central domain EamA PF00892.20 NODE_67564_length_235_cov_1.765000_g59623_i0reverse_frame_3 - 0.00048 20.3 0.1 0.00058 20.0 0.1 1.2 1 0 0 1 1 1 1 EamA-like transporter family DUF3524 PF12038.8 NODE_67564_length_235_cov_1.765000_g59623_i0reverse_frame_3 - 0.023 14.5 0.1 0.025 14.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) Actin_micro PF17003.5 NODE_67562_length_235_cov_1.780000_g59621_i0reverse_frame_3 - 0.035 13.3 2.1 0.036 13.2 2.1 1.0 1 0 0 1 1 1 0 Putative actin-like family T4SS-DNA_transf PF02534.14 NODE_67562_length_235_cov_1.780000_g59621_i0reverse_frame_3 - 0.1 11.3 0.7 0.12 11.1 0.7 1.0 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer MutH PF02976.15 NODE_67560_length_235_cov_1.790000_g59619_i0reverse_frame_2 - 0.053 13.5 0.7 0.064 13.3 0.7 1.1 1 0 0 1 1 1 0 DNA mismatch repair enzyme MutH DUF5439 PF17507.2 NODE_67560_length_235_cov_1.790000_g59619_i0reverse_frame_2 - 0.12 12.6 4.5 0.082 13.1 3.2 1.4 1 1 1 2 2 2 0 Family of unknown function (DUF5439) DUF1746 PF08508.10 NODE_67557_length_235_cov_1.800000_g59616_i0reverse_frame_3 - 0.094 13.1 4.2 0.11 12.9 4.2 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1746) HlyE PF06109.13 NODE_67557_length_235_cov_1.800000_g59616_i0forward_frame_2 - 0.00011 21.7 0.0 0.00015 21.2 0.0 1.2 1 0 0 1 1 1 1 Haemolysin E (HlyE) Methyltransf_PK PF05891.12 NODE_67556_length_235_cov_1.805000_g59615_i0reverse_frame_3 - 0.12 11.9 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase CBP4 PF07960.11 NODE_67555_length_235_cov_1.820000_g59614_i0reverse_frame_3 - 0.0048 16.8 0.2 0.0054 16.6 0.2 1.1 1 0 0 1 1 1 1 CBP4 bMG1 PF17970.1 NODE_67555_length_235_cov_1.820000_g59614_i0reverse_frame_3 - 0.13 12.4 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG1 domain Lip_prot_lig_C PF10437.9 NODE_67551_length_235_cov_1.890000_g59610_i0forward_frame_3 - 0.044 13.8 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial lipoate protein ligase C-terminus Lamprin PF06403.11 NODE_67550_length_235_cov_1.895000_g59609_i0forward_frame_3 - 0.0029 17.6 2.3 0.0035 17.3 2.3 1.1 1 0 0 1 1 1 1 Lamprin Sporozoite_P67 PF05642.11 NODE_67550_length_235_cov_1.895000_g59609_i0forward_frame_3 - 0.23 9.5 1.4 0.25 9.4 1.4 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Lamprin PF06403.11 NODE_67550_length_235_cov_1.895000_g59609_i0forward_frame_2 - 0.0084 16.1 0.5 0.0097 15.9 0.5 1.1 1 0 0 1 1 1 1 Lamprin DUF2170 PF09938.9 NODE_67548_length_235_cov_1.955000_g59607_i0reverse_frame_2 - 0.16 11.7 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2170) Homeobox_KN PF05920.11 NODE_67547_length_235_cov_1.960000_g59606_i0reverse_frame_2 - 5.8e-11 42.1 1.3 8.1e-11 41.6 1.3 1.1 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_67547_length_235_cov_1.960000_g59606_i0reverse_frame_2 - 3.2e-07 30.1 0.5 4.4e-07 29.7 0.5 1.2 1 0 0 1 1 1 1 Homeodomain CLIP_SPH_Scar PF18399.1 NODE_67545_length_235_cov_1.985000_g59604_i0forward_frame_2 - 0.003 17.6 0.7 0.0045 17.1 0.7 1.4 1 1 0 1 1 1 1 Clip-domain serine protease homolog Scarface DUF4052 PF13261.6 NODE_67543_length_235_cov_2.015000_g59602_i0forward_frame_3 - 0.048 13.5 0.0 0.052 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4052) FliD_N PF02465.18 NODE_67541_length_235_cov_2.075000_g59600_i0reverse_frame_2 - 0.063 14.0 0.9 2.9 8.6 0.1 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF3810 PF12725.7 NODE_67540_length_235_cov_2.095000_g59599_i0forward_frame_2 - 1.5 8.1 5.2 1.6 8.0 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) ssDNA-exonuc_C PF10141.9 NODE_67539_length_235_cov_2.095000_g59598_i0reverse_frame_3 - 0.16 11.6 0.0 0.17 11.5 0.0 1.0 1 0 0 1 1 1 0 Single-strand DNA-specific exonuclease, C terminal domain ORC4_C PF14629.6 NODE_67535_length_235_cov_2.190000_g59594_i0reverse_frame_3 - 0.22 10.8 0.0 0.29 10.5 0.0 1.1 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus RIB43A PF05914.12 NODE_67532_length_235_cov_2.235000_g59591_i0reverse_frame_2 - 0.0078 15.0 5.3 0.0094 14.7 5.3 1.1 1 0 0 1 1 1 1 RIB43A MtrF PF09472.10 NODE_67532_length_235_cov_2.235000_g59591_i0reverse_frame_2 - 0.051 13.0 0.3 1.1 8.7 0.0 2.1 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Synapsin_N PF10581.9 NODE_67531_length_235_cov_2.255000_g59590_i0forward_frame_2 - 0.29 11.1 3.0 60 3.7 0.0 3.4 2 1 1 3 3 3 0 Synapsin N-terminal Molybdopterin PF00384.22 NODE_67528_length_235_cov_2.355000_g59587_i0forward_frame_3 - 1.6e-08 34.0 0.0 1.8e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fzo_mitofusin PF04799.13 NODE_67527_length_235_cov_2.355000_g59586_i0reverse_frame_3 - 0.54 9.8 2.5 1 8.9 2.2 1.6 1 1 0 1 1 1 0 fzo-like conserved region Peptidase_U4 PF03419.13 NODE_67526_length_235_cov_2.390000_g59585_i0forward_frame_3 - 0.19 11.0 4.5 0.2 10.9 4.5 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA NMD3 PF04981.13 NODE_67522_length_235_cov_2.465000_g59581_i0reverse_frame_2 - 0.12 11.9 0.5 0.11 11.9 0.5 1.1 1 0 0 1 1 1 0 NMD3 family Zn-ribbon_8 PF09723.10 NODE_67522_length_235_cov_2.465000_g59581_i0reverse_frame_2 - 0.14 12.3 1.1 0.21 11.7 1.1 1.2 1 0 0 1 1 1 0 Zinc ribbon domain Shisa PF13908.6 NODE_67522_length_235_cov_2.465000_g59581_i0forward_frame_3 - 0.026 14.8 3.2 0.026 14.8 3.2 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator PALP PF00291.25 NODE_67521_length_235_cov_2.540000_g59580_i0forward_frame_3 - 5.1e-15 55.6 0.0 6e-15 55.4 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HECA PF15353.6 NODE_67521_length_235_cov_2.540000_g59580_i0forward_frame_2 - 0.039 14.2 1.1 0.042 14.1 1.1 1.0 1 0 0 1 1 1 0 Headcase protein family homologue DUF4223 PF13978.6 NODE_67519_length_235_cov_2.540000_g59578_i0reverse_frame_3 - 0.096 12.7 0.3 0.15 12.1 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4223) Ras PF00071.22 NODE_67518_length_235_cov_2.585000_g59577_i0reverse_frame_3 - 0.00093 18.8 0.0 0.00094 18.8 0.0 1.1 1 0 0 1 1 1 1 Ras family Ras PF00071.22 NODE_67518_length_235_cov_2.585000_g59577_i0reverse_frame_2 - 4.8e-12 45.8 0.1 5.7e-12 45.5 0.1 1.0 1 0 0 1 1 1 1 Ras family DNA_pol_E_B PF04042.16 NODE_67518_length_235_cov_2.585000_g59577_i0reverse_frame_2 - 0.019 14.3 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B HTH_45 PF14947.6 NODE_67516_length_235_cov_2.605000_g59575_i0reverse_frame_3 - 0.044 13.8 0.1 0.059 13.4 0.1 1.4 1 1 0 1 1 1 0 Winged helix-turn-helix UNC119_bdg PF15435.6 NODE_67514_length_235_cov_2.730000_g59573_i0reverse_frame_2 - 0.038 13.5 0.1 0.041 13.4 0.1 1.2 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue PAS PF00989.25 NODE_67512_length_235_cov_2.775000_g59571_i0forward_frame_3 - 0.07 13.1 0.0 0.083 12.9 0.0 1.1 1 0 0 1 1 1 0 PAS fold RNA_capsid PF03035.14 NODE_67510_length_235_cov_2.805000_g59569_i0forward_frame_3 - 0.051 13.6 0.0 0.057 13.4 0.0 1.0 1 0 0 1 1 1 0 Calicivirus putative RNA polymerase/capsid protein Sacchrp_dh_NADP PF03435.18 NODE_67508_length_235_cov_2.980000_g59567_i0forward_frame_3 - 0.047 14.0 0.0 0.052 13.8 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain HNH PF01844.23 NODE_67508_length_235_cov_2.980000_g59567_i0forward_frame_2 - 0.088 13.0 2.7 0.15 12.2 2.7 1.4 1 0 0 1 1 1 0 HNH endonuclease Sucrose_synth PF00862.19 NODE_67506_length_235_cov_3.000000_g59565_i0reverse_frame_3 - 0.055 11.8 0.0 0.071 11.4 0.0 1.0 1 0 0 1 1 1 0 Sucrose synthase RE_NgoFVII PF09565.10 NODE_67504_length_235_cov_3.035000_g59563_i0forward_frame_2 - 0.11 11.8 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 NgoFVII restriction endonuclease KGG PF10685.9 NODE_67501_length_235_cov_3.285000_g59560_i0reverse_frame_3 - 0.02 15.2 4.7 0.036 14.4 4.7 1.4 1 0 0 1 1 1 0 Stress-induced bacterial acidophilic repeat motif Mob_synth_C PF06463.13 NODE_67501_length_235_cov_3.285000_g59560_i0forward_frame_2 - 0.064 13.2 1.5 0.077 12.9 1.5 1.1 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C LPP PF04728.13 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.00013 22.3 3.4 0.0044 17.4 0.5 2.1 2 0 0 2 2 2 1 Lipoprotein leucine-zipper HALZ PF02183.18 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.00059 20.0 6.6 0.00068 19.8 3.2 2.2 1 1 1 2 2 2 1 Homeobox associated leucine zipper SPOB_ab PF14682.6 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.0032 17.5 1.8 0.0038 17.3 1.8 1.1 1 0 0 1 1 1 1 Sporulation initiation phospho-transferase B, C-terminal DUF4795 PF16043.5 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.0047 16.5 9.5 0.0051 16.4 9.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) SLIDE PF09111.10 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.0052 16.8 3.0 0.0052 16.8 3.0 1.6 1 1 1 2 2 2 1 SLIDE YkyA PF10368.9 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.011 15.4 14.6 0.012 15.4 14.6 1.1 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein TMPIT PF07851.13 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.011 15.0 8.1 0.011 15.0 8.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein ADIP PF11559.8 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.015 15.4 9.2 0.019 15.0 9.2 1.1 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF2067 PF09840.9 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.017 14.7 1.4 0.018 14.6 1.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) DivIC PF04977.15 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.017 14.9 10.5 0.64 9.8 2.8 2.1 1 1 1 2 2 2 0 Septum formation initiator SPOUT_MTase PF02590.17 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.028 14.4 1.4 0.034 14.1 1.4 1.1 1 0 0 1 1 1 0 Predicted SPOUT methyltransferase NRBF2 PF08961.10 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.033 13.8 2.6 0.033 13.8 2.6 1.9 1 1 1 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator Jnk-SapK_ap_N PF09744.9 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.035 14.3 9.6 0.046 14.0 9.6 1.1 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 bZIP_1 PF00170.21 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.056 13.6 4.2 0.056 13.6 4.2 2.1 1 1 1 2 2 2 0 bZIP transcription factor CALCOCO1 PF07888.11 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.071 12.0 8.6 0.073 11.9 8.6 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Rootletin PF15035.6 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.095 12.7 9.6 0.1 12.6 9.6 1.1 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion DASH_Dam1 PF08653.10 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.11 12.3 4.9 3.1 7.7 0.5 2.4 2 1 0 2 2 2 0 DASH complex subunit Dam1 VPS38 PF17649.1 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.12 11.2 8.5 0.13 11.1 8.5 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting 38 KAR9 PF08580.10 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.14 10.7 6.2 0.14 10.7 6.2 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 Atg14 PF10186.9 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.25 10.4 6.4 0.28 10.2 6.4 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlaC_arch PF05377.11 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.32 11.4 7.6 0.52 10.7 2.1 2.4 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) GrpE PF01025.19 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.36 10.5 9.7 0.44 10.2 9.2 1.4 1 1 0 1 1 1 0 GrpE DUF3450 PF11932.8 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.44 9.8 7.4 0.5 9.6 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ZapB PF06005.12 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 0.49 10.9 10.3 1.8 9.1 10.3 1.8 1 1 0 1 1 1 0 Cell division protein ZapB YabA PF06156.13 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 1.1 9.9 8.8 2.5 8.8 8.8 1.6 1 1 0 1 1 1 0 Initiation control protein YabA DUF724 PF05266.14 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 1.2 8.9 9.3 1.3 8.8 9.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) V_ATPase_I PF01496.19 NODE_67497_length_235_cov_3.725000_g59556_i0forward_frame_2 - 3 5.7 7.4 3.3 5.5 7.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Fer2_3 PF13085.6 NODE_67495_length_235_cov_4.330000_g59554_i0forward_frame_3 - 0.76 9.8 5.6 0.4 10.7 2.9 1.7 1 1 1 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain OTT_1508_deam PF14441.6 NODE_67493_length_235_cov_14.980000_g59552_i0forward_frame_2 - 0.041 13.9 0.6 0.044 13.8 0.6 1.2 1 0 0 1 1 1 0 OTT_1508-like deaminase zf-U1 PF06220.12 NODE_67493_length_235_cov_14.980000_g59552_i0forward_frame_2 - 0.14 11.9 0.9 0.14 11.9 0.9 1.7 2 0 0 2 2 2 0 U1 zinc finger MepB PF08877.10 NODE_67492_length_235_cov_15.730000_g59551_i0forward_frame_3 - 0.02 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 MepB protein Phtf-FEM1B_bdg PF12129.8 NODE_67491_length_235_cov_16.110000_g59550_i0forward_frame_3 - 0.85 9.4 3.9 0.89 9.4 3.9 1.1 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor MORN PF02493.20 NODE_67490_length_235_cov_21.555000_g59549_i0reverse_frame_2 - 0.0051 16.6 1.0 0.024 14.5 0.0 2.4 3 0 0 3 3 3 1 MORN repeat Tudor_4 PF18358.1 NODE_67486_length_235_cov_24.115000_g59545_i0forward_frame_2 - 0.057 13.0 0.1 0.096 12.3 0.1 1.4 1 0 0 1 1 1 0 Histone methyltransferase Tudor domain SUV3_C PF12513.8 NODE_67481_length_235_cov_32.130000_g59540_i0reverse_frame_2 - 2.6e-11 43.3 0.0 3.5e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial degradasome RNA helicase subunit C terminal ELYS PF13934.6 NODE_67480_length_235_cov_34.120000_g59539_i0forward_frame_2 - 0.14 12.1 0.0 0.14 12.1 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore complex assembly DUF1736 PF08409.11 NODE_67479_length_235_cov_36.560000_g59538_i0forward_frame_3 - 0.14 12.1 0.0 0.14 12.1 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1736) Ribosomal_S28e PF01200.18 NODE_67476_length_235_cov_40.900000_g59535_i0forward_frame_2 - 6.4e-22 77.3 0.2 7.9e-22 77.0 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S28e zf-RING_5 PF14634.6 NODE_67474_length_235_cov_42.660000_g59533_i0reverse_frame_3 - 3.5 7.7 10.7 3.5 7.7 0.6 2.3 2 0 0 2 2 2 0 zinc-RING finger domain DUF4216 PF13952.6 NODE_67473_length_235_cov_42.690000_g59532_i0reverse_frame_3 - 0.14 12.5 0.0 0.14 12.5 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4216) C6_DPF PF10170.9 NODE_67465_length_235_cov_47.445000_g59524_i0reverse_frame_2 - 0.021 15.2 0.1 0.022 15.1 0.1 1.2 1 0 0 1 1 1 0 Cysteine-rich domain JSRP PF15312.6 NODE_67465_length_235_cov_47.445000_g59524_i0forward_frame_3 - 0.15 12.0 0.2 0.2 11.6 0.2 1.2 1 0 0 1 1 1 0 Junctional sarcoplasmic reticulum protein DUF4018 PF13210.6 NODE_67463_length_235_cov_48.150000_g59522_i0reverse_frame_3 - 0.46 10.2 4.6 0.56 10.0 4.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) Nodulin_late PF07127.11 NODE_67462_length_235_cov_48.750000_g59521_i0forward_frame_2 - 0.012 15.9 0.4 0.02 15.2 0.4 1.4 1 0 0 1 1 1 0 Late nodulin protein PRAS PF15798.5 NODE_67460_length_235_cov_51.630000_g59519_i0forward_frame_3 - 0.061 13.9 0.0 0.069 13.7 0.0 1.0 1 0 0 1 1 1 0 Proline-rich AKT1 substrate 1 DUF2938 PF11158.8 NODE_67456_length_235_cov_58.785000_g59515_i0reverse_frame_3 - 0.03 13.8 0.0 0.033 13.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2938) cEGF PF12662.7 NODE_67456_length_235_cov_58.785000_g59515_i0forward_frame_2 - 0.05 13.5 0.1 0.092 12.7 0.1 1.5 1 0 0 1 1 1 0 Complement Clr-like EGF-like DUF1068 PF06364.12 NODE_67455_length_235_cov_62.260000_g59514_i0reverse_frame_2 - 0.025 14.5 0.5 0.026 14.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1068) SspH PF08141.12 NODE_67455_length_235_cov_62.260000_g59514_i0reverse_frame_2 - 0.032 14.4 0.1 0.048 13.8 0.1 1.2 1 0 0 1 1 1 0 Small acid-soluble spore protein H family CNOT1_TTP_bind PF16417.5 NODE_67454_length_235_cov_62.570000_g59513_i0reverse_frame_2 - 1.5e-23 83.0 0.5 1.7e-23 82.8 0.5 1.0 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain DUF1178 PF06676.11 NODE_67453_length_235_cov_64.275000_g59512_i0forward_frame_2 - 0.35 11.3 2.6 0.43 11.0 2.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) DUF3974 PF13120.6 NODE_67452_length_235_cov_64.590000_g59511_i0forward_frame_3 - 0.14 12.2 1.2 0.19 11.8 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) SPT_ssu-like PF11779.8 NODE_67450_length_235_cov_65.690000_g59509_i0forward_frame_2 - 0.0094 15.5 1.8 0.013 15.1 1.8 1.2 1 0 0 1 1 1 1 Small subunit of serine palmitoyltransferase-like PilJ PF13675.6 NODE_67445_length_235_cov_75.920000_g59504_i0forward_frame_3 - 0.21 11.6 0.0 0.24 11.5 0.0 1.1 1 0 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term PSI_integrin PF17205.3 NODE_67443_length_235_cov_79.115000_g59502_i0reverse_frame_2 - 0.3 10.9 4.6 0.57 10.0 4.6 1.6 1 1 0 1 1 1 0 Integrin plexin domain Toxin_2 PF00451.19 NODE_67442_length_235_cov_80.935000_g59501_i0reverse_frame_3 - 0.035 14.4 0.7 0.035 14.4 0.7 1.6 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 Antimicrobial_6 PF08036.11 NODE_67438_length_235_cov_92.720000_g59497_i0reverse_frame_3 - 0.07 13.2 1.3 0.17 11.9 1.3 1.7 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide EcpB_C PF18649.1 NODE_67438_length_235_cov_92.720000_g59497_i0reverse_frame_3 - 0.1 12.6 0.2 0.12 12.3 0.2 1.1 1 0 0 1 1 1 0 EcpB C-terminal domain ARL6IP6 PF15062.6 NODE_67438_length_235_cov_92.720000_g59497_i0reverse_frame_2 - 0.017 15.3 0.4 0.036 14.2 0.2 1.6 2 0 0 2 2 2 0 Haemopoietic lineage transmembrane helix HD_3 PF13023.6 NODE_67435_length_235_cov_96.635000_g59494_i0reverse_frame_2 - 0.088 12.7 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 HD domain DUF1641 PF07849.11 NODE_67434_length_235_cov_105.295000_g59493_i0forward_frame_2 - 0.0047 16.8 0.0 0.0079 16.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1641) DEFB136 PF17333.2 NODE_67432_length_235_cov_116.370000_g59491_i0forward_frame_2 - 0.015 15.3 0.4 0.015 15.3 0.4 2.3 2 1 1 3 3 3 0 Beta defensin 136 PCYCGC PF13798.6 NODE_67429_length_235_cov_161.090000_g59488_i0reverse_frame_3 - 0.05 13.5 0.1 0.05 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function with PCYCGC motif MerR PF00376.23 NODE_67429_length_235_cov_161.090000_g59488_i0forward_frame_3 - 0.12 12.2 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 MerR family regulatory protein Mcm10 PF09332.11 NODE_67429_length_235_cov_161.090000_g59488_i0forward_frame_3 - 0.57 9.5 4.4 0.68 9.3 4.4 1.0 1 0 0 1 1 1 0 Mcm10 replication factor DUF2023 PF09633.10 NODE_67429_length_235_cov_161.090000_g59488_i0forward_frame_2 - 0.042 14.0 0.1 0.043 13.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2023) HapK PF11639.8 NODE_67425_length_235_cov_208.650000_g59484_i0reverse_frame_3 - 0.19 12.2 0.0 0.23 11.9 0.0 1.2 1 0 0 1 1 1 0 REDY-like protein HapK ANXA2R PF15721.5 NODE_67425_length_235_cov_208.650000_g59484_i0reverse_frame_2 - 0.0091 16.6 0.0 0.0099 16.4 0.0 1.1 1 0 0 1 1 1 1 Annexin-2 receptor Asp PF00026.23 NODE_67422_length_235_cov_250.030000_g59481_i0reverse_frame_3 - 0.0082 15.6 0.0 0.0099 15.3 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease M-inducer_phosp PF06617.13 NODE_67421_length_235_cov_254.005000_g59480_i0reverse_frame_3 - 0.054 12.8 0.7 0.06 12.6 0.7 1.0 1 0 0 1 1 1 0 M-phase inducer phosphatase Nrap_D6 PF17407.2 NODE_67421_length_235_cov_254.005000_g59480_i0forward_frame_2 - 0.29 11.4 0.7 0.39 10.9 0.7 1.3 1 1 0 1 1 1 0 Nrap protein domain 6 DUF2784 PF10861.8 NODE_67418_length_235_cov_935.810000_g59477_i0forward_frame_3 - 0.062 13.3 0.8 0.077 13.0 0.8 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF2784) DUF4748 PF15932.5 NODE_67417_length_235_cov_1384.785000_g59476_i0reverse_frame_3 - 1.2 9.0 3.2 1.9 8.3 3.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) GED PF02212.18 NODE_67415_length_236_cov_0.766169_g59474_i0forward_frame_2 - 0.011 15.9 0.2 0.017 15.3 0.1 1.3 1 1 0 1 1 1 0 Dynamin GTPase effector domain FYVE_2 PF02318.16 NODE_67407_length_236_cov_1.094527_g59466_i0reverse_frame_3 - 0.053 13.7 0.1 0.061 13.5 0.1 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger Shisa PF13908.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.00088 19.6 2.8 0.00089 19.6 2.8 1.0 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator TMEM154 PF15102.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.0019 18.1 2.0 0.0021 18.0 2.0 1.1 1 0 0 1 1 1 1 TMEM154 protein family LRRC37AB_C PF14914.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.0075 16.2 0.6 0.0082 16.1 0.6 1.1 1 0 0 1 1 1 1 LRRC37A/B like protein 1 C-terminal domain Orthoreo_P10 PF07204.11 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.012 15.6 0.2 0.012 15.5 0.2 1.2 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 Tmemb_cc2 PF10267.9 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.024 13.8 0.2 0.026 13.7 0.2 1.1 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein Adeno_E3_CR2 PF02439.15 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.026 14.3 9.8 0.05 13.4 9.8 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 TMIE PF16038.5 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.048 13.5 5.2 0.062 13.1 5.2 1.3 1 0 0 1 1 1 0 TMIE protein CD34_antigen PF06365.12 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.083 12.5 0.1 0.095 12.3 0.1 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family DUF4051 PF13260.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.23 11.2 3.1 0.33 10.7 3.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) EphA2_TM PF14575.6 NODE_67406_length_236_cov_1.114428_g59465_i0reverse_frame_2 - 0.39 11.6 3.0 0.56 11.1 3.0 1.3 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain 7tm_2 PF00002.24 NODE_67406_length_236_cov_1.114428_g59465_i0forward_frame_3 - 0.012 14.9 2.6 0.014 14.7 2.6 1.2 1 0 0 1 1 1 0 7 transmembrane receptor (Secretin family) Laminin_EGF PF00053.24 NODE_67405_length_236_cov_1.124378_g59464_i0reverse_frame_2 - 0.13 12.4 5.1 0.22 11.7 5.1 1.5 1 1 0 1 1 1 0 Laminin EGF domain DUF2890 PF11081.8 NODE_67405_length_236_cov_1.124378_g59464_i0forward_frame_3 - 0.0029 17.7 0.4 0.0031 17.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2890) BRX_assoc PF16627.5 NODE_67405_length_236_cov_1.124378_g59464_i0forward_frame_2 - 0.0049 17.0 0.1 0.0061 16.7 0.1 1.1 1 0 0 1 1 1 1 Unstructured region between BRX_N and BRX domain SLAIN PF15301.6 NODE_67404_length_236_cov_1.144279_g59463_i0forward_frame_2 - 0.098 11.9 0.1 0.099 11.9 0.1 1.1 1 0 0 1 1 1 0 SLAIN motif-containing family Rsm1 PF08600.10 NODE_67403_length_236_cov_1.174129_g59462_i0forward_frame_3 - 0.17 12.1 0.1 0.18 12.0 0.1 1.1 1 0 0 1 1 1 0 Rsm1-like TMEM189_B_dmain PF10520.9 NODE_67402_length_236_cov_1.174129_g59461_i0forward_frame_3 - 0.029 14.5 0.7 0.035 14.2 0.7 1.1 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain TraY PF05509.11 NODE_67402_length_236_cov_1.174129_g59461_i0forward_frame_3 - 0.6 10.2 2.4 11 6.2 0.2 2.1 1 1 1 2 2 2 0 TraY domain DUF3954 PF13128.6 NODE_67397_length_236_cov_1.194030_g59456_i0forward_frame_3 - 0.046 13.5 0.4 0.073 12.9 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3954) Neuropep_like PF15161.6 NODE_67397_length_236_cov_1.194030_g59456_i0forward_frame_2 - 0.13 11.9 0.0 0.28 10.9 0.0 1.5 1 0 0 1 1 1 0 Neuropeptide-like RELT PF12606.8 NODE_67396_length_236_cov_1.194030_g59455_i0reverse_frame_2 - 0.062 12.3 1.2 0.13 11.2 1.2 1.5 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 PEX-2N PF09263.10 NODE_67394_length_236_cov_1.194030_g59453_i0forward_frame_3 - 0.14 12.5 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 Peroxisome biogenesis factor 1, N-terminal DUF2970 PF11174.8 NODE_67392_length_236_cov_1.223881_g59451_i0forward_frame_2 - 0.075 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2970) acVLRF1 PF18859.1 NODE_67389_length_236_cov_1.228856_g59448_i0reverse_frame_3 - 0.1 12.9 1.1 0.19 12.0 1.1 1.6 1 1 1 2 2 2 0 Actinobacteria/chloroflexi VLRF1 release factor SVM_signal PF12113.8 NODE_67385_length_236_cov_1.298507_g59444_i0reverse_frame_2 - 7e-06 25.8 0.1 7e-06 25.8 0.1 2.6 3 1 0 3 3 3 1 SVM protein signal sequence DUF3648 PF12364.8 NODE_67383_length_236_cov_1.318408_g59442_i0forward_frame_3 - 0.17 12.1 1.8 1.5 9.0 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3648) FlhC PF05280.11 NODE_67381_length_236_cov_1.353234_g59440_i0reverse_frame_3 - 0.22 11.3 5.6 0.25 11.1 5.6 1.1 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhC) Pullulanase_Ins PF18494.1 NODE_67381_length_236_cov_1.353234_g59440_i0reverse_frame_2 - 0.085 13.3 0.0 0.087 13.3 0.0 1.1 1 0 0 1 1 1 0 Pullulanase Ins domain Fer2_BFD PF04324.15 NODE_67380_length_236_cov_1.358209_g59439_i0reverse_frame_3 - 0.019 15.3 0.2 0.036 14.4 0.2 1.5 1 0 0 1 1 1 0 BFD-like [2Fe-2S] binding domain TMEM213 PF15192.6 NODE_67380_length_236_cov_1.358209_g59439_i0forward_frame_2 - 5.2 7.1 8.3 7.3 6.6 2.1 2.1 1 1 1 2 2 2 0 TMEM213 family TTL PF03133.15 NODE_67378_length_236_cov_1.368159_g59437_i0reverse_frame_3 - 9.2e-17 61.1 0.2 1.1e-16 60.9 0.2 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Fijivirus_P9-2 PF06837.11 NODE_67378_length_236_cov_1.368159_g59437_i0forward_frame_2 - 0.078 12.4 1.3 0.087 12.3 1.3 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein Pyridox_oxase_2 PF12766.7 NODE_67376_length_236_cov_1.373134_g59435_i0reverse_frame_2 - 0.053 14.1 0.1 0.062 13.9 0.1 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase Mucin PF01456.17 NODE_67369_length_236_cov_1.472637_g59428_i0reverse_frame_2 - 0.25 11.3 18.5 0.27 11.2 18.5 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein TFIIF_alpha PF05793.12 NODE_67369_length_236_cov_1.472637_g59428_i0reverse_frame_2 - 0.5 8.9 1.1 0.54 8.8 1.1 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) CxC4 PF18717.1 NODE_67368_length_236_cov_1.477612_g59427_i0forward_frame_3 - 0.14 12.0 5.8 0.16 11.8 5.8 1.1 1 0 0 1 1 1 0 CxC4 like cysteine cluster associated with KDZ transposases TNF PF00229.18 NODE_67368_length_236_cov_1.477612_g59427_i0forward_frame_2 - 0.067 13.1 0.0 0.074 13.0 0.0 1.0 1 0 0 1 1 1 0 TNF(Tumour Necrosis Factor) family HJURP_mid PF12346.8 NODE_67366_length_236_cov_1.502488_g59425_i0reverse_frame_3 - 0.021 15.3 0.7 0.023 15.2 0.7 1.1 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat DUF1514 PF07438.11 NODE_67365_length_236_cov_1.507463_g59424_i0reverse_frame_3 - 0.16 11.9 1.7 10 6.1 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1514) Papilloma_E5 PF03025.14 NODE_67363_length_236_cov_1.527363_g59422_i0forward_frame_2 - 3.1 8.0 10.0 0.11 12.7 3.7 1.8 2 0 0 2 2 2 0 Papillomavirus E5 YlaC PF10777.9 NODE_67362_length_236_cov_1.557214_g59421_i0reverse_frame_3 - 1 9.2 6.6 0.82 9.5 5.8 1.3 1 1 0 1 1 1 0 Inner membrane protein YlaC ABC_tran PF00005.27 NODE_67362_length_236_cov_1.557214_g59421_i0forward_frame_3 - 1.8e-05 25.3 0.0 1.9e-05 25.2 0.0 1.0 1 0 0 1 1 1 1 ABC transporter Laminin_II PF06009.12 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.002 18.1 4.4 0.0022 18.0 4.4 1.0 1 0 0 1 1 1 1 Laminin Domain II DUF3450 PF11932.8 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.025 13.9 7.6 0.029 13.7 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Macoilin PF09726.9 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.057 12.0 4.7 0.064 11.8 4.7 1.0 1 0 0 1 1 1 0 Macoilin family DASH_Dam1 PF08653.10 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.1 12.4 4.0 4.9 7.0 0.2 2.2 1 1 1 2 2 2 0 DASH complex subunit Dam1 DivIC PF04977.15 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.34 10.7 9.2 0.19 11.5 2.1 2.0 1 1 1 2 2 2 0 Septum formation initiator WXG100 PF06013.12 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 0.83 9.9 5.6 7.1 6.9 0.7 2.0 1 1 1 2 2 2 0 Proteins of 100 residues with WXG bZIP_1 PF00170.21 NODE_67357_length_236_cov_1.582090_g59416_i0reverse_frame_2 - 1.1 9.5 8.3 2 8.5 6.8 1.8 1 1 1 2 2 2 0 bZIP transcription factor Peptidase_A24 PF01478.18 NODE_67356_length_236_cov_1.582090_g59415_i0reverse_frame_3 - 0.064 13.7 0.3 0.074 13.5 0.3 1.2 1 0 0 1 1 1 0 Type IV leader peptidase family Lectin_N PF03954.14 NODE_67355_length_236_cov_1.587065_g59414_i0forward_frame_2 - 6.1 6.6 8.8 10 5.9 3.3 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain DUF3270 PF11674.8 NODE_67354_length_236_cov_1.592040_g59413_i0reverse_frame_2 - 1.3 9.2 9.2 1.3 9.2 8.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) ETRAMP PF09716.10 NODE_67354_length_236_cov_1.592040_g59413_i0reverse_frame_2 - 2.3 8.4 5.2 0.7 10.0 2.1 1.7 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF92 PF01940.16 NODE_67354_length_236_cov_1.592040_g59413_i0forward_frame_3 - 0.087 12.2 0.3 0.086 12.2 0.3 1.1 1 0 0 1 1 1 0 Integral membrane protein DUF92 TMEM18 PF14770.6 NODE_67354_length_236_cov_1.592040_g59413_i0forward_frame_2 - 0.013 15.5 0.4 0.016 15.2 0.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 ERGIC_N PF13850.6 NODE_67354_length_236_cov_1.592040_g59413_i0forward_frame_2 - 0.058 13.7 3.5 4.2 7.8 1.7 2.1 1 1 1 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) MotB_plug PF13677.6 NODE_67354_length_236_cov_1.592040_g59413_i0forward_frame_2 - 4.3 7.0 5.3 11 5.6 1.2 2.2 2 1 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB DUF4752 PF15944.5 NODE_67352_length_236_cov_1.592040_g59411_i0reverse_frame_3 - 0.087 12.9 0.2 0.13 12.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) PDZ_1 PF12812.7 NODE_67351_length_236_cov_1.592040_g59410_i0reverse_frame_3 - 0.049 13.7 0.0 0.069 13.2 0.0 1.3 1 0 0 1 1 1 0 PDZ-like domain Chitin_bind_1 PF00187.19 NODE_67339_length_236_cov_1.711443_g59398_i0reverse_frame_3 - 0.19 12.2 0.2 0.19 12.2 0.2 2.4 2 0 0 2 2 2 0 Chitin recognition protein Thionin PF00321.17 NODE_67334_length_236_cov_1.766169_g59393_i0reverse_frame_3 - 0.048 14.1 1.7 0.048 14.1 1.7 2.1 1 1 1 2 2 2 0 Plant thionin DUF4347 PF14252.6 NODE_67334_length_236_cov_1.766169_g59393_i0forward_frame_3 - 0.025 14.4 0.0 0.027 14.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4347) ABC_membrane PF00664.23 NODE_67325_length_236_cov_1.895522_g59384_i0reverse_frame_2 - 0.016 14.9 0.1 0.016 14.9 0.1 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region SecY PF00344.20 NODE_67325_length_236_cov_1.895522_g59384_i0reverse_frame_2 - 0.069 12.4 0.1 0.069 12.4 0.1 1.0 1 0 0 1 1 1 0 SecY translocase DuoxA PF10204.9 NODE_67321_length_236_cov_1.950249_g59380_i0reverse_frame_3 - 0.031 13.3 0.3 0.034 13.2 0.3 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor ALG3 PF05208.13 NODE_67320_length_236_cov_1.980100_g59379_i0reverse_frame_2 - 0.00019 21.0 2.5 0.00026 20.6 2.5 1.2 1 0 0 1 1 1 1 ALG3 protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks344.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks344.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks344.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks344.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- F-box-like PF12937.7 NODE_67317_length_236_cov_1.985075_g59376_i0reverse_frame_2 - 0.036 14.0 0.1 0.048 13.5 0.1 1.3 1 0 0 1 1 1 0 F-box-like ASC PF00858.24 NODE_67316_length_236_cov_1.990050_g59375_i0reverse_frame_2 - 0.062 12.2 0.1 0.074 12.0 0.1 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel Amb_V_allergen PF03913.13 NODE_67314_length_236_cov_1.995025_g59373_i0reverse_frame_2 - 0.1 12.5 0.1 0.15 12.0 0.1 1.2 1 0 0 1 1 1 0 Amb V Allergen SecIII_SopE_N PF05364.14 NODE_67310_length_236_cov_2.044776_g59369_i0reverse_frame_2 - 0.079 13.0 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus MTCP1 PF08991.10 NODE_67309_length_236_cov_2.069652_g59368_i0reverse_frame_2 - 0.077 13.2 7.2 0.12 12.6 7.2 1.4 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type DNA_pol_phi PF04931.13 NODE_67309_length_236_cov_2.069652_g59368_i0reverse_frame_2 - 0.17 10.0 1.6 0.19 9.8 1.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi SR-25 PF10500.9 NODE_67309_length_236_cov_2.069652_g59368_i0forward_frame_3 - 0.49 10.0 10.0 0.47 10.0 10.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Spt20 PF12090.8 NODE_67309_length_236_cov_2.069652_g59368_i0forward_frame_2 - 1.9 8.1 12.1 1.8 8.1 12.1 1.1 1 0 0 1 1 1 0 Spt20 family DHO_dh PF01180.21 NODE_67308_length_236_cov_2.104478_g59367_i0forward_frame_3 - 0.064 12.5 0.0 0.074 12.2 0.0 1.1 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase Ins145_P3_rec PF08709.11 NODE_67300_length_236_cov_2.368159_g59359_i0reverse_frame_2 - 0.038 13.2 0.1 0.039 13.1 0.1 1.2 1 0 0 1 1 1 0 Inositol 1,4,5-trisphosphate/ryanodine receptor Pkinase PF00069.25 NODE_67296_length_236_cov_2.467662_g59355_i0reverse_frame_3 - 2.8e-15 56.4 0.1 3e-15 56.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67296_length_236_cov_2.467662_g59355_i0reverse_frame_3 - 1.9e-08 33.9 0.0 2e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase MA3 PF02847.17 NODE_67295_length_236_cov_2.482587_g59354_i0reverse_frame_3 - 0.033 14.2 0.7 0.044 13.8 0.6 1.4 1 1 0 1 1 1 0 MA3 domain 7TM_GPCR_Srsx PF10320.9 NODE_67295_length_236_cov_2.482587_g59354_i0forward_frame_3 - 0.03 13.7 4.2 0.03 13.7 4.2 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srsx Pepdidase_M14_N PF18027.1 NODE_67294_length_236_cov_2.527363_g59353_i0reverse_frame_3 - 1.1e-06 29.0 0.4 1.1e-06 29.0 0.4 1.1 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain ubiquitin PF00240.23 NODE_67291_length_236_cov_2.532338_g59350_i0reverse_frame_2 - 0.067 13.0 0.1 0.083 12.7 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin family TCR PF03638.15 NODE_67291_length_236_cov_2.532338_g59350_i0reverse_frame_2 - 0.084 13.2 6.5 0.084 13.2 6.5 1.7 2 0 0 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain Sugar_tr PF00083.24 NODE_67290_length_236_cov_2.537313_g59349_i0forward_frame_3 - 4.3e-13 48.9 0.0 4.7e-13 48.8 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Lung_7-TM_R PF06814.13 NODE_67289_length_236_cov_2.547264_g59348_i0reverse_frame_3 - 0.0075 15.6 0.1 0.0087 15.3 0.1 1.0 1 0 0 1 1 1 1 Lung seven transmembrane receptor DUF3761 PF12587.8 NODE_67287_length_236_cov_2.572139_g59346_i0forward_frame_3 - 2.2 8.8 7.6 3.4 8.2 7.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3761) DUF5424 PF17462.2 NODE_67286_length_236_cov_2.621891_g59345_i0forward_frame_2 - 0.03 14.3 0.1 0.03 14.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5424) PsiF_repeat PF07769.14 NODE_67282_length_236_cov_2.761194_g59341_i0reverse_frame_3 - 8.9e-11 41.5 3.0 3.2e-10 39.7 2.8 2.0 2 0 0 2 2 2 1 psiF repeat HC2 PF07382.11 NODE_67281_length_236_cov_2.786070_g59340_i0reverse_frame_3 - 0.48 10.5 3.5 1 9.4 3.5 1.5 1 1 0 1 1 1 0 Histone H1-like nucleoprotein HC2 Toprim_N PF08275.11 NODE_67278_length_236_cov_2.925373_g59337_i0reverse_frame_3 - 4.3e-10 39.7 0.0 6e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 DNA primase catalytic core, N-terminal domain SANTA PF09133.10 NODE_67278_length_236_cov_2.925373_g59337_i0reverse_frame_3 - 0.047 14.2 0.0 0.053 14.0 0.0 1.3 1 1 0 1 1 1 0 SANTA (SANT Associated) DUF3482 PF11981.8 NODE_67278_length_236_cov_2.925373_g59337_i0reverse_frame_3 - 0.071 12.5 0.0 0.081 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) Sp38 PF07354.12 NODE_67278_length_236_cov_2.925373_g59337_i0reverse_frame_3 - 0.18 11.2 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) Pox_RNA_pol PF03293.14 NODE_67272_length_236_cov_3.388060_g59331_i0forward_frame_3 - 0.075 12.7 0.1 0.088 12.5 0.1 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 18 kD subunit RSN1_TM PF13967.6 NODE_67272_length_236_cov_3.388060_g59331_i0forward_frame_2 - 0.023 14.5 0.1 0.024 14.4 0.1 1.1 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport HemY_N PF07219.13 NODE_67272_length_236_cov_3.388060_g59331_i0forward_frame_2 - 0.2 11.9 0.6 0.3 11.3 0.6 1.2 1 0 0 1 1 1 0 HemY protein N-terminus MFS_1_like PF12832.7 NODE_67268_length_236_cov_3.572139_g59327_i0forward_frame_3 - 0.011 14.6 0.2 0.012 14.5 0.2 1.0 1 0 0 1 1 1 0 MFS_1 like family SHR3_chaperone PF08229.11 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_3 - 0.029 13.4 0.1 0.029 13.4 0.1 1.2 1 0 0 1 1 1 0 ER membrane protein SH3 Herpes_LMP2 PF07415.11 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_3 - 0.087 11.6 0.1 0.099 11.4 0.1 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein TssO PF17561.2 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_2 - 0.019 15.1 0.9 0.021 14.9 0.9 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO TAP35_44 PF07265.11 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_2 - 0.024 14.6 0.3 0.026 14.5 0.3 1.1 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 Herpes_glycop PF01528.16 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_2 - 0.04 12.8 0.0 0.042 12.7 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus glycoprotein M Mucin PF01456.17 NODE_67266_length_236_cov_3.597015_g59325_i0reverse_frame_2 - 0.32 11.0 1.9 0.38 10.7 1.9 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein Reo_P9 PF06043.11 NODE_67265_length_236_cov_3.676617_g59324_i0reverse_frame_2 - 0.028 13.9 0.0 0.03 13.7 0.0 1.0 1 0 0 1 1 1 0 Reovirus P9-like family MPLKIP PF15502.6 NODE_67262_length_236_cov_5.343284_g59321_i0reverse_frame_3 - 0.047 13.9 1.2 0.053 13.7 0.2 1.6 2 0 0 2 2 2 0 M-phase-specific PLK1-interacting protein SP_C-Propep PF08999.10 NODE_67261_length_236_cov_5.825871_g59320_i0reverse_frame_2 - 0.25 11.1 6.4 0.3 10.9 6.4 1.1 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF4131 PF13567.6 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_2 - 0.0077 15.9 6.9 0.0084 15.8 6.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) Wzy_C PF04932.15 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_2 - 0.24 11.0 2.8 0.26 10.9 2.8 1.2 1 0 0 1 1 1 0 O-Antigen ligase DUF3810 PF12725.7 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_2 - 1.4 8.2 6.5 1.4 8.2 6.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Herpes_LMP1 PF05297.11 NODE_67261_length_236_cov_5.825871_g59320_i0forward_frame_2 - 6.5 5.9 12.2 6.6 5.8 12.2 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF2087 PF09860.9 NODE_67260_length_236_cov_7.179104_g59319_i0reverse_frame_3 - 0.061 13.5 0.2 0.092 12.9 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) NurA PF09376.10 NODE_67258_length_236_cov_26.900498_g59317_i0reverse_frame_3 - 0.032 13.9 0.1 0.036 13.8 0.1 1.0 1 0 0 1 1 1 0 NurA domain UPF0542 PF15086.6 NODE_67258_length_236_cov_26.900498_g59317_i0reverse_frame_3 - 0.069 13.1 2.0 0.079 12.9 1.6 1.4 1 1 0 1 1 1 0 Uncharacterised protein family UPF0542 Adeno_VII PF03228.14 NODE_67258_length_236_cov_26.900498_g59317_i0reverse_frame_2 - 0.078 13.6 0.2 0.088 13.4 0.2 1.1 1 0 0 1 1 1 0 Adenoviral core protein VII EB PF01683.18 NODE_67255_length_236_cov_36.388060_g59314_i0reverse_frame_2 - 0.11 12.8 6.8 0.081 13.2 1.8 2.1 2 0 0 2 2 2 0 EB module Hormone_2 PF00123.20 NODE_67253_length_236_cov_37.353234_g59312_i0reverse_frame_2 - 0.16 11.9 0.9 14 5.7 0.0 2.9 3 0 0 3 3 3 0 Peptide hormone MPS2 PF17060.5 NODE_67252_length_236_cov_37.910448_g59311_i0forward_frame_3 - 0.002 17.5 0.2 0.0021 17.4 0.2 1.0 1 0 0 1 1 1 1 Monopolar spindle protein 2 SlyX PF04102.12 NODE_67252_length_236_cov_37.910448_g59311_i0forward_frame_3 - 0.0048 17.5 0.5 0.0062 17.1 0.5 1.1 1 0 0 1 1 1 1 SlyX FXMR_C2 PF16098.5 NODE_67251_length_236_cov_39.353234_g59310_i0forward_frame_3 - 0.056 13.9 1.7 0.069 13.6 1.7 1.1 1 0 0 1 1 1 0 Fragile X-related mental retardation protein C-terminal region 2 Baculo_p74_N PF08404.10 NODE_67251_length_236_cov_39.353234_g59310_i0forward_frame_2 - 0.18 10.9 0.0 0.21 10.6 0.0 1.1 1 0 0 1 1 1 0 Baculoviridae P74 N-terminal SAUGI PF06106.11 NODE_67250_length_236_cov_40.716418_g59309_i0forward_frame_3 - 0.11 13.0 0.0 0.18 12.4 0.0 1.4 1 0 0 1 1 1 0 S. aureus uracil DNA glycosylase inhibitor Fer4_13 PF13370.6 NODE_67238_length_236_cov_57.353234_g59297_i0reverse_frame_3 - 0.027 15.0 0.1 0.051 14.1 0.1 1.5 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Telomerase_RBD PF12009.8 NODE_67233_length_236_cov_60.855721_g59292_i0forward_frame_2 - 0.11 12.6 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Telomerase ribonucleoprotein complex - RNA binding domain DUF3583 PF12126.8 NODE_67229_length_236_cov_67.855721_g59288_i0reverse_frame_3 - 0.65 9.4 2.1 0.74 9.2 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3583) DUF4492 PF14899.6 NODE_67229_length_236_cov_67.855721_g59288_i0reverse_frame_2 - 0.0019 18.1 4.7 0.0024 17.8 4.7 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4492) Glyco_hydro_59M PF17387.2 NODE_67228_length_236_cov_69.815920_g59287_i0reverse_frame_2 - 0.038 14.1 0.1 0.042 14.0 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 central domain IBV_3A PF03617.13 NODE_67224_length_236_cov_85.318408_g59283_i0forward_frame_2 - 0.05 13.6 0.3 0.071 13.1 0.3 1.2 1 0 0 1 1 1 0 IBV 3A protein SURF2 PF05477.11 NODE_67221_length_236_cov_100.517413_g59280_i0forward_frame_3 - 0.47 10.1 1.2 0.56 9.9 1.2 1.0 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) Fijivirus_P9-2 PF06837.11 NODE_67221_length_236_cov_100.517413_g59280_i0forward_frame_2 - 2.6 7.4 11.0 3 7.3 11.0 1.4 1 1 0 1 1 1 0 Fijivirus P9-2 protein KAR9 PF08580.10 NODE_67220_length_236_cov_109.756219_g59279_i0reverse_frame_3 - 0.12 10.9 0.0 0.13 10.8 0.0 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 PAAR_motif PF05488.13 NODE_67219_length_236_cov_113.263682_g59278_i0reverse_frame_3 - 0.034 14.3 0.1 0.07 13.3 0.0 1.5 1 1 1 2 2 2 0 PAAR motif CIMR PF00878.18 NODE_67217_length_236_cov_129.781095_g59276_i0forward_frame_3 - 0.0042 17.2 0.6 0.0048 17.0 0.6 1.3 1 1 0 1 1 1 1 Cation-independent mannose-6-phosphate receptor repeat HMG_box_2 PF09011.10 NODE_67217_length_236_cov_129.781095_g59276_i0forward_frame_2 - 0.029 15.0 0.1 0.053 14.1 0.1 1.5 1 1 0 1 1 1 0 HMG-box domain P53_C PF11619.8 NODE_67216_length_236_cov_131.885572_g59275_i0reverse_frame_3 - 0.044 13.8 0.1 0.059 13.4 0.1 1.4 1 1 0 1 1 1 0 Transcription factor P53 - C terminal domain DUF4466 PF14725.6 NODE_67216_length_236_cov_131.885572_g59275_i0reverse_frame_3 - 0.071 12.6 0.1 0.08 12.4 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4466) SIC PF03482.13 NODE_67213_length_236_cov_181.407960_g59272_i0reverse_frame_3 - 0.29 11.3 1.0 0.56 10.4 0.1 1.8 2 0 0 2 2 2 0 sic protein repeat TSGP1 PF07771.11 NODE_67208_length_236_cov_318.895522_g59267_i0reverse_frame_3 - 0.12 12.6 4.1 0.14 12.3 4.1 1.2 1 0 0 1 1 1 0 Tick salivary peptide group 1 Med19 PF10278.9 NODE_67208_length_236_cov_318.895522_g59267_i0reverse_frame_3 - 0.25 11.3 10.6 0.3 11.0 10.6 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 CLIP PF12032.8 NODE_67208_length_236_cov_318.895522_g59267_i0reverse_frame_2 - 0.025 14.9 0.3 0.025 14.9 0.3 1.5 2 0 0 2 2 2 0 Regulatory CLIP domain of proteinases FeThRed_B PF02943.15 NODE_67207_length_236_cov_328.184080_g59266_i0reverse_frame_2 - 0.016 15.2 1.2 0.018 15.1 1.2 1.2 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain KASH PF10541.9 NODE_67206_length_236_cov_328.915423_g59265_i0forward_frame_2 - 0.015 15.5 2.7 0.023 15.0 2.7 1.2 1 0 0 1 1 1 0 Nuclear envelope localisation domain PP1 PF07430.11 NODE_67202_length_236_cov_3592.800995_g59261_i0reverse_frame_2 - 0.096 12.7 1.3 0.12 12.4 1.3 1.2 1 0 0 1 1 1 0 Phloem filament protein PP1 cystatin-like domain PDDEXK_6 PF04720.12 NODE_67200_length_237_cov_0.787129_g59259_i0reverse_frame_3 - 0.098 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 PDDEXK-like family of unknown function YMF19 PF02326.15 NODE_67196_length_237_cov_0.900990_g59255_i0reverse_frame_2 - 0.099 13.4 0.3 0.14 13.0 0.3 1.3 1 0 0 1 1 1 0 Plant ATP synthase F0 EBA-175_VI PF11556.8 NODE_67195_length_237_cov_0.905941_g59254_i0reverse_frame_2 - 0.071 13.4 0.1 0.085 13.2 0.1 1.2 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 EB1 PF03271.17 NODE_67189_length_237_cov_1.000000_g59248_i0reverse_frame_3 - 0.15 12.3 0.1 0.22 11.8 0.1 1.3 1 0 0 1 1 1 0 EB1-like C-terminal motif Headcase PF16002.5 NODE_67189_length_237_cov_1.000000_g59248_i0reverse_frame_2 - 0.054 12.9 0.1 0.061 12.8 0.1 1.1 1 0 0 1 1 1 0 Headcase protein OGFr_III PF04680.13 NODE_67187_length_237_cov_1.049505_g59246_i0forward_frame_3 - 0.11 13.1 1.8 5.7 7.7 0.6 2.6 2 0 0 2 2 2 0 Opioid growth factor receptor repeat LRV PF01816.17 NODE_67187_length_237_cov_1.049505_g59246_i0forward_frame_2 - 0.071 13.5 2.9 0.85 10.1 0.9 2.4 2 0 0 2 2 2 0 Leucine rich repeat variant NS3_envE PF02723.14 NODE_67182_length_237_cov_1.108911_g59241_i0forward_frame_3 - 0.03 14.4 3.1 0.039 14.0 3.1 1.1 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E HTH_Tnp_Tc3_2 PF01498.18 NODE_67181_length_237_cov_1.113861_g59240_i0reverse_frame_2 - 0.033 14.4 0.0 0.039 14.2 0.0 1.1 1 0 0 1 1 1 0 Transposase DUF2681 PF10883.8 NODE_67178_length_237_cov_1.183168_g59237_i0forward_frame_3 - 3.1 8.3 13.0 3.7 8.0 13.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) Med19 PF10278.9 NODE_67178_length_237_cov_1.183168_g59237_i0forward_frame_3 - 4.6 7.1 13.7 4.8 7.1 13.7 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 DUF4820 PF16091.5 NODE_67178_length_237_cov_1.183168_g59237_i0forward_frame_2 - 0.39 10.1 5.0 0.42 10.0 5.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Auts2 PF15336.6 NODE_67178_length_237_cov_1.183168_g59237_i0forward_frame_2 - 3.8 7.6 12.7 4.1 7.5 12.7 1.1 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein PX PF00787.24 NODE_67177_length_237_cov_1.183168_g59236_i0forward_frame_2 - 6e-13 48.8 0.2 6.8e-13 48.6 0.2 1.0 1 0 0 1 1 1 1 PX domain DUF4094 PF13334.6 NODE_67176_length_237_cov_1.183168_g59235_i0reverse_frame_2 - 0.046 14.1 0.2 0.056 13.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) MamL-1 PF09596.10 NODE_67172_length_237_cov_1.188119_g59231_i0reverse_frame_3 - 0.065 13.5 0.2 0.082 13.2 0.2 1.2 1 0 0 1 1 1 0 MamL-1 domain BRD4_CDT PF17105.5 NODE_67171_length_237_cov_1.188119_g59230_i0reverse_frame_2 - 3.3 7.4 11.1 17 5.1 0.1 2.4 1 1 1 2 2 2 0 C-terminal domain of bromodomain protein 4 Polysacc_syn_2C PF08485.10 NODE_67169_length_237_cov_1.188119_g59228_i0reverse_frame_3 - 0.37 10.5 3.1 0.52 10.0 2.4 1.6 1 1 1 2 2 2 0 Polysaccharide biosynthesis protein C-terminal Ocular_alb PF02101.15 NODE_67166_length_237_cov_1.212871_g59225_i0reverse_frame_2 - 0.058 12.3 0.5 0.063 12.2 0.5 1.0 1 0 0 1 1 1 0 Ocular albinism type 1 protein Lustrin_cystein PF14625.6 NODE_67165_length_237_cov_1.222772_g59224_i0forward_frame_2 - 0.14 12.5 21.8 0.31 11.5 3.3 3.4 1 1 2 3 3 3 0 Lustrin, cysteine-rich repeated domain Opy2 PF09463.10 NODE_67165_length_237_cov_1.222772_g59224_i0forward_frame_2 - 0.21 12.0 12.7 0.34 11.2 1.5 3.5 2 2 1 3 3 3 0 Opy2 protein Inhibitor_I36 PF03995.13 NODE_67165_length_237_cov_1.222772_g59224_i0forward_frame_2 - 1 9.3 10.2 4.1 7.4 0.5 3.3 3 0 0 3 3 3 0 Peptidase inhibitor family I36 Dickkopf_N PF04706.12 NODE_67165_length_237_cov_1.222772_g59224_i0forward_frame_2 - 2.6 8.6 10.0 1.1e+03 0.1 10.0 3.4 1 1 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region NCD3G PF07562.14 NODE_67162_length_237_cov_1.301980_g59221_i0forward_frame_2 - 0.31 11.1 4.8 1.1 9.2 0.5 2.2 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR DUF3896 PF13035.6 NODE_67152_length_237_cov_1.396040_g59211_i0reverse_frame_2 - 0.014 15.6 0.4 0.017 15.2 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3896) DEC-1_C PF04626.13 NODE_67150_length_237_cov_1.400990_g59209_i0forward_frame_2 - 0.072 13.5 0.1 0.083 13.3 0.1 1.1 1 0 0 1 1 1 0 Dec-1 protein, C terminal region DUF4570 PF15134.6 NODE_67149_length_237_cov_1.425743_g59208_i0reverse_frame_3 - 0.077 13.0 0.0 0.082 12.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4570) MAP1B_neuraxin PF00414.17 NODE_67149_length_237_cov_1.425743_g59208_i0reverse_frame_3 - 0.13 11.9 0.5 0.24 11.0 0.5 1.5 1 0 0 1 1 1 0 Neuraxin and MAP1B repeat Pkr1 PF08636.10 NODE_67149_length_237_cov_1.425743_g59208_i0forward_frame_3 - 0.15 12.2 2.0 0.26 11.5 2.0 1.4 1 1 0 1 1 1 0 ER protein Pkr1 Antimicrobial23 PF16048.5 NODE_67147_length_237_cov_1.440594_g59206_i0reverse_frame_3 - 0.0072 16.0 0.5 0.015 15.0 0.5 1.5 1 0 0 1 1 1 1 Frog antimicrobial peptide Tnp_zf-ribbon_2 PF13842.6 NODE_67145_length_237_cov_1.465347_g59204_i0reverse_frame_3 - 0.015 16.0 2.7 0.028 15.2 2.7 1.5 1 0 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon ZapD PF07072.11 NODE_67145_length_237_cov_1.465347_g59204_i0forward_frame_2 - 0.073 12.8 0.1 0.091 12.5 0.1 1.1 1 0 0 1 1 1 0 Cell division protein PX PF00787.24 NODE_67138_length_237_cov_1.544554_g59197_i0reverse_frame_2 - 9.1e-16 57.8 0.2 9.4e-16 57.8 0.2 1.0 1 0 0 1 1 1 1 PX domain Zincin_2 PF10103.9 NODE_67138_length_237_cov_1.544554_g59197_i0reverse_frame_2 - 0.031 13.6 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Zincin-like metallopeptidase INTS5_N PF14837.6 NODE_67135_length_237_cov_1.549505_g59194_i0reverse_frame_2 - 0.33 10.5 6.7 0.35 10.4 6.7 1.1 1 0 0 1 1 1 0 Integrator complex subunit 5 N-terminus PriCT_1 PF08708.11 NODE_67135_length_237_cov_1.549505_g59194_i0forward_frame_3 - 0.041 13.6 0.0 0.66 9.7 0.0 2.0 2 0 0 2 2 2 0 Primase C terminal 1 (PriCT-1) LRR_12 PF18837.1 NODE_67134_length_237_cov_1.569307_g59193_i0reverse_frame_2 - 0.033 13.8 0.4 0.21 11.3 0.2 2.0 1 1 1 2 2 2 0 Leucine-rich repeat DUF5554 PF17709.1 NODE_67134_length_237_cov_1.569307_g59193_i0forward_frame_2 - 0.18 11.9 3.1 0.23 11.6 3.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5554) DUF2071 PF09844.9 NODE_67132_length_237_cov_1.584158_g59191_i0reverse_frame_3 - 0.016 14.8 0.1 0.017 14.8 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (COG2071) Tail_spike_N PF18668.1 NODE_67132_length_237_cov_1.584158_g59191_i0reverse_frame_2 - 0.061 13.2 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain VirB3 PF05101.13 NODE_67130_length_237_cov_1.608911_g59189_i0reverse_frame_3 - 0.21 11.8 3.2 0.53 10.5 3.2 1.7 1 1 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF1010 PF06231.11 NODE_67129_length_237_cov_1.613861_g59188_i0forward_frame_3 - 0.0025 18.3 3.8 0.0039 17.7 3.8 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1010) Muraidase PF11860.8 NODE_67128_length_237_cov_1.633663_g59187_i0forward_frame_3 - 0.074 13.3 0.3 0.092 13.0 0.3 1.1 1 0 0 1 1 1 0 N-acetylmuramidase RRM_1 PF00076.22 NODE_67128_length_237_cov_1.633663_g59187_i0forward_frame_2 - 0.008 16.0 0.0 0.015 15.1 0.0 1.7 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HU-DNA_bdg PF14848.6 NODE_67128_length_237_cov_1.633663_g59187_i0forward_frame_2 - 0.093 12.7 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 DNA-binding domain DUF3928 PF13065.6 NODE_67128_length_237_cov_1.633663_g59187_i0forward_frame_2 - 0.11 13.2 0.0 0.13 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3928) MDFI PF15316.6 NODE_67127_length_237_cov_1.663366_g59186_i0reverse_frame_3 - 0.095 12.8 5.5 0.15 12.2 5.5 1.3 1 1 0 1 1 1 0 MyoD family inhibitor SBF_like PF13593.6 NODE_67127_length_237_cov_1.663366_g59186_i0forward_frame_3 - 0.024 14.0 1.3 0.026 13.8 1.3 1.0 1 0 0 1 1 1 0 SBF-like CPA transporter family (DUF4137) VIT PF08487.10 NODE_67126_length_237_cov_1.693069_g59185_i0forward_frame_2 - 0.0035 17.5 0.2 0.0046 17.2 0.2 1.2 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain DUF4428 PF14471.6 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 0.0003 20.7 1.9 0.00043 20.1 1.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) zf_UBZ PF18439.1 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 0.0086 15.6 0.9 0.0086 15.6 0.9 2.0 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger zf-C2H2 PF00096.26 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 0.016 15.6 0.4 0.031 14.7 0.4 1.5 1 0 0 1 1 1 0 Zinc finger, C2H2 type NCD3G PF07562.14 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 0.2 11.6 6.1 0.29 11.1 6.0 1.4 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR DUF2116 PF09889.9 NODE_67125_length_237_cov_1.707921_g59184_i0reverse_frame_3 - 4.8 7.2 6.2 23 5.0 6.2 1.9 1 1 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2254 PF10011.9 NODE_67125_length_237_cov_1.707921_g59184_i0forward_frame_3 - 0.36 9.6 1.3 0.41 9.4 1.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Exo_endo_phos_2 PF14529.6 NODE_67123_length_237_cov_1.732673_g59182_i0reverse_frame_2 - 0.064 13.1 0.1 0.072 12.9 0.1 1.3 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase XAF1_C PF18608.1 NODE_67122_length_237_cov_1.752475_g59181_i0reverse_frame_3 - 0.07 12.7 0.4 0.088 12.4 0.4 1.2 1 0 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain NPM1-C PF16276.5 NODE_67121_length_237_cov_1.757426_g59180_i0forward_frame_3 - 0.013 15.4 0.5 0.018 15.0 0.5 1.2 1 0 0 1 1 1 0 Nucleophosmin C-terminal domain DUF424 PF04242.13 NODE_67121_length_237_cov_1.757426_g59180_i0forward_frame_3 - 0.047 14.0 0.4 0.053 13.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF424) rve PF00665.26 NODE_67120_length_237_cov_1.762376_g59179_i0reverse_frame_3 - 0.068 13.4 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Integrase core domain Pox_EPC_I2-L1 PF12575.8 NODE_67119_length_237_cov_1.772277_g59178_i0reverse_frame_3 - 0.061 13.5 1.0 0.074 13.3 0.6 1.4 1 1 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 Orthoreo_P10 PF07204.11 NODE_67119_length_237_cov_1.772277_g59178_i0reverse_frame_3 - 8.3 6.5 8.5 0.67 9.9 2.4 1.9 1 1 1 2 2 2 0 Orthoreovirus membrane fusion protein p10 Mpv17_PMP22 PF04117.12 NODE_67118_length_237_cov_1.772277_g59177_i0forward_frame_2 - 0.085 13.1 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Mpv17 / PMP22 family DUF3798 PF12683.7 NODE_67115_length_237_cov_1.797030_g59174_i0reverse_frame_2 - 0.13 11.7 0.0 0.14 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3798) Papilloma_E5 PF03025.14 NODE_67114_length_237_cov_1.797030_g59173_i0forward_frame_2 - 0.0078 16.3 0.8 0.0099 16.0 0.8 1.2 1 0 0 1 1 1 1 Papillomavirus E5 Perm-CXXC PF15629.6 NODE_67113_length_237_cov_1.826733_g59172_i0reverse_frame_2 - 5.7 7.3 9.9 1.2 9.4 6.1 1.9 2 0 0 2 2 2 0 Permuted single zf-CXXC unit NAD_synthase PF02540.17 NODE_67112_length_237_cov_1.851485_g59171_i0forward_frame_3 - 0.13 11.4 0.6 0.14 11.2 0.6 1.2 1 0 0 1 1 1 0 NAD synthase P53_tetramer PF07710.11 NODE_67111_length_237_cov_1.876238_g59170_i0reverse_frame_3 - 0.13 11.6 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 P53 tetramerisation motif COX14 PF14880.6 NODE_67111_length_237_cov_1.876238_g59170_i0reverse_frame_3 - 0.16 11.8 0.1 0.16 11.8 0.1 2.0 2 0 0 2 2 2 0 Cytochrome oxidase c assembly Glyco_hydro_85 PF03644.13 NODE_67111_length_237_cov_1.876238_g59170_i0reverse_frame_2 - 0.044 13.2 0.1 0.044 13.2 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 85 DDE_Tnp_1_5 PF13737.6 NODE_67110_length_237_cov_1.886139_g59169_i0forward_frame_3 - 0.079 13.3 0.2 0.088 13.1 0.2 1.1 1 0 0 1 1 1 0 Transposase DDE domain MerR-DNA-bind PF09278.11 NODE_67107_length_237_cov_1.915842_g59166_i0forward_frame_2 - 0.16 12.6 0.0 0.24 12.0 0.0 1.2 1 0 0 1 1 1 0 MerR, DNA binding Lamprin PF06403.11 NODE_67106_length_237_cov_1.940594_g59165_i0reverse_frame_3 - 0.73 9.8 5.4 0.89 9.5 5.4 1.3 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_67106_length_237_cov_1.940594_g59165_i0reverse_frame_2 - 0.00054 19.9 8.3 0.00099 19.1 8.3 1.5 1 1 0 1 1 1 1 Lamprin Chorion_1 PF01723.16 NODE_67106_length_237_cov_1.940594_g59165_i0reverse_frame_2 - 0.026 14.5 2.1 0.033 14.2 2.1 1.2 1 0 0 1 1 1 0 Chorion protein DUF3112 PF11309.8 NODE_67100_length_237_cov_2.054455_g59159_i0reverse_frame_2 - 0.017 14.6 1.3 0.017 14.6 1.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) Cu PF17563.2 NODE_67099_length_237_cov_2.059406_g59158_i0reverse_frame_3 - 0.077 13.2 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Cupiennin Wzz PF02706.15 NODE_67090_length_237_cov_2.153465_g59149_i0forward_frame_3 - 6.2e-05 23.2 0.7 9.8e-05 22.6 0.7 1.3 1 0 0 1 1 1 1 Chain length determinant protein IQ PF00612.27 NODE_67086_length_237_cov_2.504950_g59145_i0reverse_frame_3 - 0.027 14.2 0.1 0.07 13.0 0.1 1.7 1 0 0 1 1 1 0 IQ calmodulin-binding motif PDR_CDR PF06422.12 NODE_67086_length_237_cov_2.504950_g59145_i0forward_frame_3 - 9.9 6.1 6.4 0.91 9.5 0.4 1.9 1 1 0 2 2 2 0 CDR ABC transporter DUF5488 PF17590.2 NODE_67085_length_237_cov_2.534653_g59144_i0reverse_frame_3 - 0.01 15.6 0.2 0.012 15.4 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5488) Catalase-rel PF06628.12 NODE_67081_length_237_cov_2.747525_g59140_i0forward_frame_3 - 0.064 13.5 0.0 0.096 12.9 0.0 1.2 1 0 0 1 1 1 0 Catalase-related immune-responsive SRTM1 PF15872.5 NODE_67077_length_237_cov_2.801980_g59136_i0forward_frame_3 - 0.011 15.8 0.6 0.013 15.6 0.6 1.2 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 TAXi_N PF14543.6 NODE_67076_length_237_cov_2.801980_g59135_i0reverse_frame_2 - 2e-07 31.4 0.0 2.2e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Asp PF00026.23 NODE_67076_length_237_cov_2.801980_g59135_i0reverse_frame_2 - 0.00027 20.4 0.0 0.0003 20.3 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Beta_helix PF13229.6 NODE_67075_length_237_cov_2.836634_g59134_i0reverse_frame_3 - 0.034 14.0 0.2 0.038 13.9 0.2 1.0 1 0 0 1 1 1 0 Right handed beta helix region SUa-2TM PF18179.1 NODE_67075_length_237_cov_2.836634_g59134_i0forward_frame_2 - 0.53 9.5 5.6 0.62 9.3 5.6 1.0 1 0 0 1 1 1 0 SMODS- and Ubiquitin system-associated 2TM effector domain DUF3969 PF13108.6 NODE_67072_length_237_cov_3.163366_g59131_i0forward_frame_3 - 0.028 14.4 0.2 0.044 13.8 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3969) ATP-synt_S1 PF05827.12 NODE_67071_length_237_cov_3.287129_g59130_i0forward_frame_2 - 0.0047 16.8 0.8 0.0058 16.5 0.8 1.1 1 0 0 1 1 1 1 Vacuolar ATP synthase subunit S1 (ATP6S1) DHHC PF01529.20 NODE_67070_length_237_cov_3.306931_g59129_i0reverse_frame_2 - 3.3e-22 79.0 14.8 3.6e-22 78.9 14.8 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase zf-AD PF07776.15 NODE_67070_length_237_cov_3.306931_g59129_i0reverse_frame_2 - 0.0092 16.2 2.7 0.011 15.9 2.7 1.2 1 0 0 1 1 1 1 Zinc-finger associated domain (zf-AD) Med27 PF11571.8 NODE_67064_length_237_cov_4.247525_g59123_i0forward_frame_2 - 0.052 13.9 0.0 0.069 13.5 0.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 27 P68HR PF08061.11 NODE_67063_length_237_cov_4.846535_g59122_i0forward_frame_2 - 0.17 12.0 0.7 0.31 11.2 0.7 1.4 1 0 0 1 1 1 0 P68HR (NUC004) repeat TAFII55_N PF04658.13 NODE_67061_length_237_cov_17.148515_g59120_i0forward_frame_2 - 0.029 14.1 0.1 0.035 13.8 0.1 1.1 1 0 0 1 1 1 0 TAFII55 protein conserved region GIIM PF08388.11 NODE_67060_length_237_cov_29.673267_g59119_i0reverse_frame_2 - 0.044 13.8 0.1 0.06 13.4 0.0 1.4 1 1 0 1 1 1 0 Group II intron, maturase-specific domain NAD_binding_1 PF00175.21 NODE_67058_length_237_cov_38.292079_g59117_i0reverse_frame_3 - 7.8e-05 23.3 0.0 0.0001 22.9 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DUF1195 PF06708.11 NODE_67057_length_237_cov_39.861386_g59116_i0reverse_frame_3 - 0.18 11.5 0.1 0.21 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1195) RNA_polI_A34 PF08208.11 NODE_67057_length_237_cov_39.861386_g59116_i0forward_frame_3 - 6.7 6.7 23.0 7.8 6.5 23.0 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 PS_Dcarbxylase PF02666.15 NODE_67056_length_237_cov_41.000000_g59115_i0forward_frame_2 - 6.3e-05 22.6 0.0 6.6e-05 22.5 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase Shadoo PF14999.6 NODE_67055_length_237_cov_41.599010_g59114_i0reverse_frame_2 - 0.007 16.5 0.1 0.0081 16.3 0.1 1.1 1 0 0 1 1 1 1 Shadow of prion protein, neuroprotective Ribosomal_L35Ae PF01247.18 NODE_67054_length_237_cov_43.034653_g59113_i0reverse_frame_3 - 2.1e-19 69.4 0.3 3.1e-19 68.9 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L35Ae DUF2080 PF09853.9 NODE_67054_length_237_cov_43.034653_g59113_i0reverse_frame_3 - 0.049 13.4 0.1 0.096 12.5 0.1 1.5 1 0 0 1 1 1 0 Putative transposon-encoded protein (DUF2080) End3 PF12761.7 NODE_67053_length_237_cov_43.603960_g59112_i0reverse_frame_3 - 0.0024 18.1 0.0 0.0026 18.0 0.0 1.1 1 0 0 1 1 1 1 Actin cytoskeleton-regulatory complex protein END3 EF-hand_4 PF12763.7 NODE_67053_length_237_cov_43.603960_g59112_i0reverse_frame_3 - 0.041 13.8 0.0 0.05 13.6 0.0 1.2 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand Prok-RING_4 PF14447.6 NODE_67051_length_237_cov_45.282178_g59110_i0reverse_frame_3 - 0.01 15.6 1.7 0.016 15.0 1.7 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 ThiS PF02597.20 NODE_67051_length_237_cov_45.282178_g59110_i0forward_frame_2 - 0.054 14.1 0.0 0.068 13.8 0.0 1.2 1 0 0 1 1 1 0 ThiS family Bunya_G2 PF03563.13 NODE_67049_length_237_cov_46.297030_g59108_i0forward_frame_3 - 0.061 12.6 1.7 0.07 12.4 1.7 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 E1-E2_ATPase PF00122.20 NODE_67046_length_237_cov_50.277228_g59105_i0forward_frame_2 - 0.047 13.2 0.1 0.053 13.1 0.1 1.0 1 0 0 1 1 1 0 E1-E2 ATPase ATP-synt_8 PF00895.20 NODE_67046_length_237_cov_50.277228_g59105_i0forward_frame_2 - 1.5 9.3 4.2 1.1 9.8 2.6 1.6 1 1 1 2 2 2 0 ATP synthase protein 8 KAAG1 PF15354.6 NODE_67042_length_237_cov_56.762376_g59101_i0forward_frame_2 - 0.0041 17.6 1.2 0.0055 17.2 1.2 1.2 1 0 0 1 1 1 1 Kidney-associated antigen 1 DUF4834 PF16118.5 NODE_67039_length_237_cov_63.133663_g59098_i0forward_frame_2 - 0.28 12.2 1.3 0.27 12.2 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Peptidase_C16 PF01831.17 NODE_67038_length_237_cov_65.648515_g59097_i0reverse_frame_3 - 0.022 14.5 0.1 0.024 14.4 0.1 1.0 1 0 0 1 1 1 0 Peptidase C16 family Bowman-Birk_leg PF00228.20 NODE_67037_length_237_cov_69.247525_g59096_i0reverse_frame_2 - 0.025 15.0 5.8 0.46 11.0 1.0 2.5 1 1 1 2 2 2 0 Bowman-Birk serine protease inhibitor family QueC PF06508.13 NODE_67037_length_237_cov_69.247525_g59096_i0forward_frame_2 - 0.045 13.2 0.2 0.05 13.1 0.2 1.1 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Rft-1 PF04506.13 NODE_67036_length_237_cov_70.004950_g59095_i0reverse_frame_3 - 0.2 10.4 0.4 0.22 10.2 0.4 1.1 1 0 0 1 1 1 0 Rft protein KCNQ_channel PF03520.14 NODE_67036_length_237_cov_70.004950_g59095_i0forward_frame_3 - 0.021 14.7 0.8 0.023 14.6 0.8 1.1 1 0 0 1 1 1 0 KCNQ voltage-gated potassium channel DUF1229 PF06797.11 NODE_67034_length_237_cov_71.633663_g59093_i0reverse_frame_3 - 1.1 9.4 5.4 15 5.8 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1229) ECM1 PF05782.11 NODE_67034_length_237_cov_71.633663_g59093_i0forward_frame_2 - 0.042 12.8 1.9 0.04 12.9 1.9 1.1 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) Herpes_capsid PF06112.11 NODE_67032_length_237_cov_75.004950_g59091_i0reverse_frame_3 - 0.14 12.2 1.0 0.17 12.0 1.0 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Abhydrolase_6 PF12697.7 NODE_67032_length_237_cov_75.004950_g59091_i0forward_frame_3 - 0.00013 22.7 0.0 0.00014 22.5 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family ecTbetaR2 PF08917.10 NODE_67030_length_237_cov_77.851485_g59089_i0reverse_frame_3 - 0.045 13.7 0.6 0.05 13.5 0.6 1.1 1 0 0 1 1 1 0 Transforming growth factor beta receptor 2 ectodomain DUF2755 PF10954.8 NODE_67030_length_237_cov_77.851485_g59089_i0forward_frame_3 - 0.093 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2755) YMF19 PF02326.15 NODE_67030_length_237_cov_77.851485_g59089_i0forward_frame_2 - 0.056 14.2 0.0 0.058 14.2 0.0 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 CCSMST1 PF15013.6 NODE_67025_length_237_cov_96.400990_g59084_i0forward_frame_3 - 0.072 13.3 0.6 0.1 12.8 0.4 1.3 1 1 0 1 1 1 0 CCSMST1 family PGC7_Stella PF15549.6 NODE_67022_length_237_cov_104.594059_g59081_i0reverse_frame_3 - 2.2 8.3 6.7 2.5 8.1 6.7 1.1 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain SAND PF01342.21 NODE_67020_length_237_cov_110.628713_g59079_i0reverse_frame_3 - 0.28 10.9 3.3 8.5 6.2 0.1 2.2 1 1 1 2 2 2 0 SAND domain DUF3678 PF12435.8 NODE_67018_length_237_cov_115.836634_g59077_i0forward_frame_3 - 0.062 12.7 1.8 0.12 11.8 1.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) Med13_N PF11597.8 NODE_67017_length_237_cov_124.425743_g59076_i0reverse_frame_3 - 0.042 13.2 0.1 0.044 13.2 0.1 1.1 1 0 0 1 1 1 0 Mediator complex subunit 13 N-terminal SCIFF PF13165.6 NODE_67017_length_237_cov_124.425743_g59076_i0forward_frame_3 - 0.022 14.7 3.3 0.034 14.1 3.3 1.3 1 0 0 1 1 1 0 Six-cysteine peptide SCIFF DUF4131 PF13567.6 NODE_67016_length_237_cov_134.306931_g59075_i0reverse_frame_3 - 0.024 14.3 0.0 0.029 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) TRAP-gamma PF07074.12 NODE_67016_length_237_cov_134.306931_g59075_i0reverse_frame_3 - 0.058 13.0 2.9 0.067 12.7 2.9 1.1 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Cadherin_tail PF15974.5 NODE_67016_length_237_cov_134.306931_g59075_i0forward_frame_3 - 0.008 16.5 0.2 0.008 16.5 0.2 1.2 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region YqfD PF06898.11 NODE_67014_length_237_cov_188.910891_g59073_i0reverse_frame_2 - 1.7 7.4 3.1 3.7 6.3 0.0 1.9 2 0 0 2 2 2 0 Putative stage IV sporulation protein YqfD DUF1691 PF07950.11 NODE_67014_length_237_cov_188.910891_g59073_i0forward_frame_2 - 0.049 14.4 0.0 0.055 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1691) SSXRD PF09514.10 NODE_67009_length_237_cov_252.727723_g59068_i0forward_frame_3 - 0.045 13.4 0.1 0.069 12.7 0.1 1.3 1 0 0 1 1 1 0 SSXRD motif SLC3A2_N PF16028.5 NODE_67008_length_237_cov_256.039604_g59067_i0forward_frame_2 - 0.085 12.4 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus TAFII55_N PF04658.13 NODE_67007_length_237_cov_256.059406_g59066_i0reverse_frame_2 - 0.025 14.3 0.1 0.025 14.3 0.1 1.1 1 0 0 1 1 1 0 TAFII55 protein conserved region zf-C2HC5 PF06221.13 NODE_67006_length_237_cov_437.039604_g59065_i0forward_frame_2 - 0.0077 16.2 0.9 3 7.9 0.2 2.1 1 1 1 2 2 2 2 Putative zinc finger motif, C2HC5-type DUF3276 PF11680.8 NODE_67004_length_237_cov_929.272277_g59063_i0forward_frame_3 - 0.22 11.7 0.7 0.27 11.3 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3276) TrbC PF04956.13 NODE_67001_length_237_cov_32943.935644_g59060_i0reverse_frame_2 - 0.078 13.2 4.0 0.094 12.9 4.0 1.1 1 0 0 1 1 1 0 TrbC/VIRB2 family Spidroin_MaSp PF11260.8 NODE_67001_length_237_cov_32943.935644_g59060_i0forward_frame_3 - 0.027 14.7 4.4 0.035 14.4 4.4 1.2 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Adeno_E3_CR2 PF02439.15 ORF9935 - 3.1 7.7 6.9 6.6 6.6 3.0 2.2 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 DUF4131 PF13567.6 ORF9935 - 8.8 6.0 6.8 9.6 5.8 6.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) INSC_LBD PF16748.5 ORF98951 - 0.033 13.6 0.0 0.052 13.0 0.0 1.3 1 0 0 1 1 1 0 Inscuteable LGN-binding domain Albumin_I PF08027.11 ORF98708 - 0.015 14.9 1.2 0.015 14.9 1.2 2.6 2 1 1 3 3 3 0 Albumin I chain b Toxin_25 PF08095.11 ORF98282 - 0.037 14.0 0.1 0.061 13.3 0.1 1.3 1 0 0 1 1 1 0 Hefutoxin family baeRF_family5 PF18846.1 ORF97218 - 0.014 15.6 0.5 0.015 15.5 0.5 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 5 DUF4710 PF15828.5 ORF97218 - 0.65 10.1 5.9 0.61 10.2 5.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4710) SH3_11 PF18103.1 ORF97005 - 0.09 13.0 0.9 0.16 12.2 0.9 1.5 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain Fijivirus_P9-2 PF06837.11 ORF96504 - 0.0083 15.6 0.2 0.0091 15.5 0.2 1.1 1 0 0 1 1 1 1 Fijivirus P9-2 protein Penicillinase_R PF03965.16 ORF96485 - 0.065 13.6 0.0 0.076 13.4 0.0 1.1 1 0 0 1 1 1 0 Penicillinase repressor # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks345.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks345.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks345.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks345.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:21:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RNA_pol_Rpb2_5 PF04567.17 ORF94912 - 0.036 14.6 0.2 0.047 14.2 0.2 1.3 1 1 0 1 1 1 0 RNA polymerase Rpb2, domain 5 zf-like PF04071.12 ORF94795 - 0.026 14.4 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Cysteine-rich small domain NPC1_N PF16414.5 ORF94784 - 0.042 13.4 2.3 0.049 13.2 2.3 1.3 1 1 0 1 1 1 0 Niemann-Pick C1 N terminus Ndc1_Nup PF09531.10 ORF94516 - 4.8 5.7 12.5 5.3 5.6 12.5 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup AsmA_2 PF13502.6 ORF92973 - 4.9e-12 45.9 0.4 5.5e-12 45.7 0.4 1.0 1 0 0 1 1 1 1 AsmA-like C-terminal region FliD_N PF02465.18 ORF92826 - 0.026 15.2 0.6 0.026 15.2 0.6 1.1 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus 7TM_GPCR_Srz PF10325.9 ORF91545 - 0.0084 15.5 1.4 0.0098 15.3 1.4 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srz DUF3984 PF13136.6 ORF91280 - 0.3 10.5 5.9 0.25 10.7 5.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3984) DUF3810 PF12725.7 ORF90032 - 0.054 12.8 2.6 0.055 12.8 2.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF863 PF05904.11 ORF89758 - 0.12 10.7 0.1 0.14 10.6 0.1 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) DUF525 PF04379.14 ORF88848 - 0.036 14.3 0.4 0.052 13.8 0.4 1.2 1 0 0 1 1 1 0 ApaG domain UPF0242 PF06785.11 ORF88455 - 1.7 8.7 4.4 2.1 8.4 4.4 1.3 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus CPP1-like PF11833.8 ORF87962 - 0.38 10.4 2.0 0.46 10.1 2.0 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like SPC25 PF06703.11 ORF87712 - 0.13 12.1 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) 5_nucleotid PF05761.14 ORF87685 - 0.067 12.1 0.0 0.069 12.0 0.0 1.0 1 0 0 1 1 1 0 5' nucleotidase family NDUFA12 PF05071.16 ORF87627 - 0.14 13.0 0.0 0.16 12.9 0.0 1.1 1 0 0 1 1 1 0 NADH ubiquinone oxidoreductase subunit NDUFA12 OKR_DC_1_N PF03709.15 ORF87382 - 0.092 13.0 0.0 0.092 13.0 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain IBV_3A PF03617.13 ORF87289 - 1.2 9.2 10.3 1.6 8.7 9.3 1.7 1 1 0 1 1 1 0 IBV 3A protein FHA PF00498.26 ORF86897 - 3.2e-11 43.4 0.2 4.2e-11 43.0 0.2 1.2 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF86897 - 5.7e-07 29.8 0.0 6.8e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain CBM_26 PF16824.5 ORF86897 - 0.13 12.4 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 C-terminal carbohydrate-binding module FAS_N PF17828.1 ORF86543 - 0.048 13.7 0.1 0.053 13.5 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta Sgf11 PF08209.11 ORF86384 - 0.1 12.2 0.3 0.18 11.4 0.3 1.3 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) Cyclin_N PF00134.23 ORF86320 - 0.039 13.7 0.0 0.047 13.4 0.0 1.1 1 0 0 1 1 1 0 Cyclin, N-terminal domain GCD14 PF08704.10 ORF86318 - 0.16 11.7 8.7 0.15 11.7 8.7 1.0 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Endonuc-BsobI PF09194.10 ORF86318 - 0.23 10.6 6.2 0.24 10.5 6.2 1.1 1 0 0 1 1 1 0 Restriction endonuclease BsobI Peptidase_C7 PF01830.18 ORF86138 - 1.7 8.0 5.2 1.9 7.9 5.2 1.0 1 0 0 1 1 1 0 Peptidase C7 family PP1_bind PF15276.6 ORF85876 - 0.047 14.0 0.1 0.069 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein phosphatase 1 binding zf-B_box PF00643.24 ORF85405 - 0.05 13.8 0.4 0.088 13.0 0.4 1.4 1 0 0 1 1 1 0 B-box zinc finger FEZ PF07763.13 ORF85073 - 0.086 12.6 0.5 0.1 12.3 0.5 1.1 1 0 0 1 1 1 0 FEZ-like protein SYS1 PF09801.9 ORF84565 - 0.044 13.9 0.7 0.049 13.8 0.7 1.1 1 0 0 1 1 1 0 Integral membrane protein S linking to the trans Golgi network Insulin PF00049.18 ORF84135 - 0.022 15.7 1.8 0.029 15.4 1.8 1.2 1 0 0 1 1 1 0 Insulin/IGF/Relaxin family Rxt3 PF08642.10 ORF84135 - 0.28 12.0 1.0 0.32 11.8 1.0 1.1 1 0 0 1 1 1 0 Histone deacetylation protein Rxt3 DDE_Tnp_IS66 PF03050.14 ORF84135 - 0.56 9.6 7.5 0.63 9.5 7.5 1.0 1 0 0 1 1 1 0 Transposase IS66 family DUF1682 PF07946.14 ORF84135 - 9.6 5.3 19.3 12 5.0 19.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) UIM PF02809.20 ORF82118 - 1.5 8.9 4.5 2.1 8.5 3.0 1.9 2 0 0 2 2 2 0 Ubiquitin interaction motif SpoU_sub_bind PF08032.12 ORF82024 - 0.17 12.2 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 RNA 2'-O ribose methyltransferase substrate binding Pkinase PF00069.25 ORF81905 - 0.0064 15.9 0.2 0.044 13.2 0.2 1.9 1 1 0 1 1 1 1 Protein kinase domain BING4CT PF08149.11 ORF81737 - 0.094 12.5 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 BING4CT (NUC141) domain ubiquitin PF00240.23 ORF81453 - 1.4e-06 28.0 0.0 1.6e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF81453 - 8.6e-05 22.9 0.1 0.00027 21.3 0.1 1.7 1 1 0 1 1 1 1 Ubiquitin-like domain DUF5326 PF17260.2 ORF81393 - 0.071 13.3 2.5 0.65 10.2 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5326) BIRC6 PF12356.8 ORF80914 - 0.13 11.7 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Baculoviral IAP repeat-containing protein 6 SYS1 PF09801.9 ORF78270 - 0.044 13.9 0.7 0.049 13.8 0.7 1.1 1 0 0 1 1 1 0 Integral membrane protein S linking to the trans Golgi network DUF2070 PF09843.9 ORF78096 - 9 4.5 8.5 9.2 4.4 8.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) NAT PF04768.13 ORF77890 - 0.022 14.4 0.4 0.026 14.2 0.4 1.0 1 0 0 1 1 1 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase Bromodomain PF00439.25 ORF77890 - 0.047 13.8 0.4 0.058 13.5 0.4 1.2 1 0 0 1 1 1 0 Bromodomain AsmA_2 PF13502.6 ORF76851 - 4.9e-12 45.9 0.4 5.5e-12 45.7 0.4 1.0 1 0 0 1 1 1 1 AsmA-like C-terminal region DUF2713 PF10897.8 ORF76610 - 8.1e-44 150.0 0.7 8.9e-44 149.9 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2713) DUF5401 PF17380.2 ORF75697 - 0.15 10.2 0.0 0.15 10.1 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Toxin_21 PF08091.11 ORF75495 - 0.061 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Spider insecticidal peptide CBM_1 PF00734.18 ORF75370 - 0.0016 18.4 1.8 0.0016 18.4 1.8 1.8 2 0 0 2 2 2 1 Fungal cellulose binding domain DUF2085 PF09858.9 ORF73783 - 0.0017 18.8 0.5 0.0038 17.7 0.3 1.6 1 1 1 2 2 2 1 Predicted membrane protein (DUF2085) Death PF00531.22 ORF73419 - 0.034 14.3 0.0 0.046 13.9 0.0 1.3 1 0 0 1 1 1 0 Death domain SdpA PF17418.2 ORF72480 - 0.052 13.4 0.0 0.064 13.1 0.0 1.1 1 0 0 1 1 1 0 Sporulation delaying protein SdpA Toxin_25 PF08095.11 ORF72355 - 0.037 14.0 0.1 0.061 13.3 0.1 1.3 1 0 0 1 1 1 0 Hefutoxin family FAD-oxidase_C PF02913.19 ORF71685 - 2.6e-20 73.1 0.1 2.9e-20 73.0 0.1 1.0 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain zf-CCCH PF00642.24 ORF70189 - 1.1 9.3 4.9 0.29 11.1 1.3 1.9 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-Tim10_DDP PF02953.15 ORF69948 - 0.16 11.6 6.2 0.032 13.9 2.7 1.6 2 1 0 2 2 2 0 Tim10/DDP family zinc finger PP1_bind PF15276.6 ORF69599 - 0.047 14.0 0.1 0.069 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein phosphatase 1 binding DPM2 PF07297.12 ORF69526 - 0.00015 22.0 3.4 0.00019 21.6 3.4 1.1 1 0 0 1 1 1 1 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Frizzled PF01534.17 ORF69526 - 0.0076 15.3 0.7 0.0079 15.3 0.7 1.1 1 0 0 1 1 1 1 Frizzled/Smoothened family membrane region Phage_holin_3_6 PF07332.11 ORF69526 - 0.012 15.6 3.5 0.014 15.4 3.5 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF202 PF02656.15 ORF69526 - 0.064 13.7 3.6 0.14 12.7 3.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF1230 PF06799.11 ORF69526 - 0.081 13.0 0.2 0.094 12.8 0.2 1.2 1 0 0 1 1 1 0 Conserved in the green lineage and diatoms 27 UPF0242 PF06785.11 ORF69526 - 0.24 11.5 2.7 0.28 11.3 2.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Glycophorin_A PF01102.18 ORF69526 - 0.29 11.4 0.5 0.4 10.9 0.5 1.2 1 0 0 1 1 1 0 Glycophorin A DHHC PF01529.20 ORF69526 - 0.46 10.6 3.6 0.55 10.3 3.6 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF3422 PF11902.8 ORF69526 - 0.84 8.7 2.0 0.99 8.4 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3422) DUF3592 PF12158.8 ORF69526 - 1.1 9.3 4.2 0.5 10.4 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3592) Say1_Mug180 PF10340.9 ORF69122 - 0.05 12.5 0.3 0.055 12.3 0.3 1.0 1 0 0 1 1 1 0 Steryl acetyl hydrolase zf-TRAF PF02176.18 ORF68112 - 0.053 14.2 0.5 0.073 13.8 0.5 1.1 1 0 0 1 1 1 0 TRAF-type zinc finger DUF3150 PF11348.8 ORF68112 - 0.18 11.0 0.1 0.24 10.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) Fer4_8 PF13183.6 ORF67276 - 0.019 15.4 0.4 2.6 8.6 0.0 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain FeoC PF09012.10 ORF67060 - 7.3e-13 48.4 0.4 8.6e-13 48.2 0.4 1.0 1 0 0 1 1 1 1 FeoC like transcriptional regulator TrmB PF01978.19 ORF67060 - 2.1e-06 27.5 0.0 2.8e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 ORF67060 - 0.04 13.5 0.0 0.061 12.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding FAM167 PF11652.8 ORF67060 - 0.043 14.3 0.0 0.046 14.2 0.0 1.1 1 0 0 1 1 1 0 FAM167 Fe_dep_repress PF01325.19 ORF67060 - 0.16 12.2 0.1 0.21 11.8 0.1 1.1 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF5511 PF17630.2 ORF66998 - 0.13 12.5 0.1 0.16 12.2 0.1 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5511) DDE_Tnp_1_4 PF13701.6 ORF66788 - 0.2 9.9 0.0 0.23 9.7 0.0 1.0 1 0 0 1 1 1 0 Transposase DDE domain group 1 Rep_1 PF01446.17 ORF65854 - 7.9 5.9 6.9 9.3 5.6 6.9 1.1 1 0 0 1 1 1 0 Replication protein zf-DBF PF07535.12 ORF64855 - 0.013 15.6 0.4 0.035 14.2 0.4 1.8 1 0 0 1 1 1 0 DBF zinc finger RINGv PF12906.7 ORF64855 - 0.03 14.4 6.5 0.072 13.2 6.5 1.7 1 1 0 1 1 1 0 RING-variant domain zinc_ribbon_12 PF11331.8 ORF64784 - 0.0096 15.7 0.9 0.016 15.0 0.9 1.4 1 0 0 1 1 1 1 Probable zinc-ribbon domain zn-ribbon_14 PF16503.5 ORF64395 - 0.044 13.3 0.8 0.073 12.6 0.8 1.3 1 0 0 1 1 1 0 Zinc-ribbon DUF1512 PF07431.12 ORF63909 - 0.45 9.5 3.4 0.54 9.2 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1512) Oxysterol_BP PF01237.18 ORF63815 - 0.089 11.6 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 Oxysterol-binding protein LisH_2 PF16045.5 ORF6371 - 0.1 11.7 0.2 0.21 10.6 0.0 1.7 2 0 0 2 2 2 0 LisH DUF5544 PF17698.1 ORF63376 - 0.012 15.7 0.9 0.013 15.6 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5544) PPR_2 PF13041.6 ORF63049 - 6.7e-06 26.2 0.1 9.3e-06 25.8 0.1 1.3 1 0 0 1 1 1 1 PPR repeat family PPR_3 PF13812.6 ORF63049 - 0.0016 18.4 0.0 0.003 17.6 0.0 1.5 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 ORF63049 - 0.046 14.0 0.7 0.099 12.9 0.4 1.7 2 0 0 2 2 2 0 PPR repeat GCD14 PF08704.10 ORF6296 - 0.16 11.7 8.7 0.15 11.7 8.7 1.0 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Endonuc-BsobI PF09194.10 ORF6296 - 0.23 10.6 6.2 0.24 10.5 6.2 1.1 1 0 0 1 1 1 0 Restriction endonuclease BsobI ER PF01133.17 ORF62926 - 0.017 15.1 0.1 0.02 14.9 0.1 1.3 1 1 0 1 1 1 0 Enhancer of rudimentary DUF1981 PF09324.10 ORF62926 - 0.062 13.2 0.0 0.074 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1981) Opiods_neuropep PF01160.18 ORF62862 - 0.0054 16.8 2.4 0.0054 16.8 2.4 1.7 2 0 0 2 2 2 1 Vertebrate endogenous opioids neuropeptide NDUFA12 PF05071.16 ORF6247 - 0.14 13.0 0.0 0.16 12.9 0.0 1.1 1 0 0 1 1 1 0 NADH ubiquinone oxidoreductase subunit NDUFA12 Ish1 PF10281.9 ORF62388 - 0.16 12.3 1.9 0.31 11.4 1.9 1.5 1 0 0 1 1 1 0 Putative stress-responsive nuclear envelope protein GAGA PF09237.11 ORF61203 - 0.05 13.4 1.2 0.068 13.0 1.2 1.3 1 0 0 1 1 1 0 GAGA factor MerB PF03243.15 ORF6010 - 0.061 13.5 0.4 0.067 13.3 0.4 1.1 1 0 0 1 1 1 0 Alkylmercury lyase zf-LITAF-like PF10601.9 ORF59272 - 0.13 12.5 4.0 0.1 12.9 3.0 1.5 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain CcmH PF03918.14 ORF584 - 0.0026 17.0 0.2 0.0029 16.9 0.2 1.2 1 0 0 1 1 1 1 Cytochrome C biogenesis protein Ank_5 PF13857.6 ORF58374 - 6.9e-10 39.0 2.8 9.3e-06 25.8 0.5 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF58374 - 1.3e-09 38.5 0.1 1.5e-09 38.3 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF58374 - 7.4e-07 29.3 1.5 0.015 15.7 0.0 2.4 2 1 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF58374 - 8e-06 26.3 0.1 1.2e-05 25.7 0.1 1.4 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF58374 - 0.00013 22.1 0.0 0.84 10.4 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeat NinE PF05322.11 ORF5803 - 0.086 12.7 1.3 0.11 12.4 0.9 1.5 1 1 0 1 1 1 0 NINE Protein DUF3934 PF13070.6 ORF57827 - 0.0055 17.2 0.4 0.0087 16.5 0.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3934) LDcluster4 PF18306.1 ORF5588 - 0.08 12.5 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 SLOG cluster4 family cIII PF08134.11 ORF55862 - 0.13 12.1 0.8 5.8 6.8 0.0 2.2 2 0 0 2 2 2 0 cIII protein family CMV_US PF08001.11 ORF5560 - 0.12 11.6 1.3 0.12 11.6 1.3 1.0 1 0 0 1 1 1 0 CMV US Ldl_recept_a PF00057.18 ORF54422 - 0.0046 17.1 1.2 0.0046 17.1 1.2 2.0 2 0 0 2 2 2 1 Low-density lipoprotein receptor domain class A PTSIIB_sorb PF03830.15 ORF54000 - 0.17 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 PTS system sorbose subfamily IIB component DUF2054 PF10218.9 ORF52151 - 0.016 15.3 1.7 0.019 15.1 1.7 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) TrmO PF01980.16 ORF52079 - 0.066 13.4 0.0 0.072 13.3 0.0 1.1 1 0 0 1 1 1 0 tRNA-methyltransferase O Topo_C_assoc PF14370.6 ORF52079 - 0.088 12.8 0.1 0.13 12.2 0.1 1.4 1 1 0 1 1 1 0 C-terminal topoisomerase domain 7TM_GPCR_Srz PF10325.9 ORF51961 - 0.0084 15.5 1.4 0.0098 15.3 1.4 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srz Pox_F15 PF04596.12 ORF518 - 0.021 14.6 0.3 0.024 14.4 0.3 1.2 1 0 0 1 1 1 0 Poxvirus protein F15 CA_like PF10563.9 ORF51464 - 2.3e-12 47.2 0.2 3e-12 46.8 0.2 1.2 1 0 0 1 1 1 1 Putative carbonic anhydrase FAS_N PF17828.1 ORF51316 - 0.048 13.7 0.1 0.053 13.5 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta Pkinase PF00069.25 ORF50678 - 0.0012 18.3 0.0 0.0013 18.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF3891 PF13030.6 ORF50616 - 0.074 12.8 0.1 0.078 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3891) CMV_US PF08001.11 ORF49577 - 0.12 11.6 1.3 0.12 11.6 1.3 1.0 1 0 0 1 1 1 0 CMV US Phage_terminase PF10668.9 ORF49188 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Phage terminase small subunit Clat_adaptor_s PF01217.20 ORF48788 - 0.58 10.1 4.3 0.66 9.9 4.3 1.0 1 0 0 1 1 1 0 Clathrin adaptor complex small chain Dymeclin PF09742.9 ORF48589 - 1.4e-09 37.0 0.1 1.5e-09 36.9 0.1 1.0 1 0 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein Hid1 PF12722.7 ORF48589 - 8.6e-09 34.1 0.3 8.6e-09 34.1 0.3 1.0 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein CENP-I PF07778.11 ORF48528 - 0.085 11.6 0.7 0.088 11.5 0.7 1.0 1 0 0 1 1 1 0 Mis6 Nodulin_late PF07127.11 ORF48528 - 0.12 12.7 2.3 0.18 12.2 2.2 1.4 1 1 0 1 1 1 0 Late nodulin protein Myb_DNA-binding PF00249.31 ORF48508 - 7.2e-10 38.9 0.4 9.3e-10 38.6 0.4 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF48508 - 7.8e-05 22.8 0.2 0.00013 22.2 0.2 1.5 1 1 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF48508 - 0.00012 21.9 1.4 0.00014 21.6 1.4 1.2 1 0 0 1 1 1 1 Myb DNA-binding like DUF3760 PF12586.8 ORF48123 - 0.011 15.9 0.7 0.017 15.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3760) Smg4_UPF3 PF03467.15 ORF46651 - 0.035 14.1 0.1 0.038 14.0 0.1 1.1 1 0 0 1 1 1 0 Smg-4/UPF3 family DUF863 PF05904.11 ORF45823 - 0.12 10.7 0.1 0.14 10.6 0.1 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) Nucleoside_tran PF01733.18 ORF45775 - 3.6e-13 49.6 0.6 4e-13 49.4 0.6 1.0 1 0 0 1 1 1 1 Nucleoside transporter MAR_sialic_bdg PF10564.9 ORF45147 - 0.0056 16.7 0.3 0.0061 16.6 0.3 1.2 1 0 0 1 1 1 1 Sialic-acid binding micronemal adhesive repeat CHZ PF09649.10 ORF45077 - 0.07 12.6 1.4 0.13 11.8 1.4 1.4 1 0 0 1 1 1 0 Histone chaperone domain CHZ Tmemb_14 PF03647.13 ORF43215 - 3.4e-09 37.3 0.9 3.8e-09 37.2 0.9 1.0 1 0 0 1 1 1 1 Transmembrane proteins 14C Fer4_9 PF13187.6 ORF42294 - 0.011 15.9 3.7 0.015 15.5 3.7 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain TraS PF10624.9 ORF42249 - 0.16 11.9 2.1 0.18 11.7 2.1 1.1 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS GCD14 PF08704.10 ORF41897 - 0.16 11.7 8.7 0.15 11.7 8.7 1.0 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Endonuc-BsobI PF09194.10 ORF41897 - 0.23 10.6 6.2 0.24 10.5 6.2 1.1 1 0 0 1 1 1 0 Restriction endonuclease BsobI YrzK PF17449.2 ORF41464 - 0.083 13.2 0.1 0.12 12.7 0.1 1.4 1 1 0 1 1 1 0 Uncharacterized YrzK-like DUF4893 PF16233.5 ORF41404 - 0.12 12.0 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4893) DUF1065 PF06358.11 ORF41214 - 0.015 15.3 0.2 0.017 15.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1065) Cytochrom_B558a PF05038.13 ORF40394 - 0.49 9.9 2.6 0.47 10.0 2.6 1.1 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit DUF5511 PF17630.2 ORF39816 - 0.13 12.5 0.1 0.16 12.2 0.1 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5511) FtsX PF02687.21 ORF38557 - 0.56 10.7 4.9 0.76 10.3 4.9 1.2 1 0 0 1 1 1 0 FtsX-like permease family Ost5 PF05251.12 ORF38241 - 0.86 9.9 9.0 0.72 10.2 4.2 2.1 2 0 0 2 2 2 0 Oligosaccharyltransferase subunit 5 Opiods_neuropep PF01160.18 ORF38050 - 0.0054 16.8 2.4 0.0054 16.8 2.4 1.7 2 0 0 2 2 2 1 Vertebrate endogenous opioids neuropeptide bZIP_1 PF00170.21 ORF37787 - 0.083 13.0 1.2 0.15 12.2 1.2 1.4 1 0 0 1 1 1 0 bZIP transcription factor DMRL_synthase PF00885.19 ORF36935 - 0.057 13.2 0.0 0.065 13.1 0.0 1.0 1 0 0 1 1 1 0 6,7-dimethyl-8-ribityllumazine synthase Peptidase_M18 PF02127.15 ORF366 - 0.15 10.8 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) ESM4 PF15952.5 ORF35356 - 0.49 10.8 2.7 0.64 10.4 2.7 1.2 1 0 0 1 1 1 0 Enhancer of split M4 family SRTM1 PF15872.5 ORF34976 - 0.15 12.2 0.1 0.15 12.2 0.1 1.5 2 0 0 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 PsbW PF07123.12 ORF34737 - 0.74 9.8 2.3 0.76 9.8 2.3 1.0 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) Spem1 PF15670.5 ORF34737 - 7.1 6.1 10.3 7.8 6.0 10.3 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF2897 PF11446.8 ORF34336 - 0.65 9.9 6.4 0.17 11.8 3.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2897) DUF4886 PF16227.5 ORF34005 - 0.094 11.9 0.1 0.098 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4886) BT1 PF03092.16 ORF33457 - 0.0038 15.5 0.4 0.0045 15.3 0.4 1.0 1 0 0 1 1 1 1 BT1 family DUF5433 PF17498.2 ORF33457 - 0.047 13.9 0.8 0.058 13.6 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5433) DUF1244 PF06844.11 ORF33447 - 0.043 14.0 0.0 0.068 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1244) Abhydrolase_3 PF07859.13 ORF32618 - 8.2e-06 25.8 0.0 3.4e-05 23.8 0.0 1.7 2 0 0 2 2 2 1 alpha/beta hydrolase fold DLH PF01738.18 ORF32618 - 0.027 14.0 0.0 0.027 14.0 0.0 1.0 1 0 0 1 1 1 0 Dienelactone hydrolase family DUF5629 PF18629.1 ORF32374 - 0.15 12.6 0.1 0.21 12.2 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5629) Choline_kin_N PF04428.14 ORF32050 - 0.11 12.2 0.1 0.26 11.0 0.0 1.7 2 0 0 2 2 2 0 Choline kinase N terminus PIG-P PF08510.12 ORF3194 - 0.083 12.8 2.4 0.13 12.2 1.4 1.4 1 1 0 1 1 1 0 PIG-P Peptidase_S11 PF00768.20 ORF31395 - 4.7e-07 29.5 0.0 4.9e-07 29.4 0.0 1.0 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Fe-S_biosyn PF01521.20 ORF30965 - 0.086 13.0 0.0 0.098 12.9 0.0 1.2 1 1 0 1 1 1 0 Iron-sulphur cluster biosynthesis zf-CHCC PF10276.9 ORF30846 - 1.4e-08 34.6 0.5 1.8e-08 34.3 0.5 1.2 1 0 0 1 1 1 1 Zinc-finger domain Katanin_con80 PF13925.6 ORF30026 - 0.11 12.6 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 con80 domain of Katanin TRAM_LAG1_CLN8 PF03798.16 ORF29883 - 0.017 14.9 0.1 0.019 14.7 0.1 1.1 1 0 0 1 1 1 0 TLC domain TetM_leader PF08076.11 ORF28389 - 0.13 12.0 3.9 0.49 10.2 0.3 2.3 2 0 0 2 2 2 0 Tetracycline resistance determinant leader peptide zf-H2C2_2 PF13465.6 ORF28234 - 1.1e-09 38.2 8.6 3.9e-08 33.4 3.3 2.1 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF28234 - 3.1e-06 27.3 4.2 3.1e-06 27.3 4.2 2.1 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF28234 - 0.00058 20.5 2.6 0.00058 20.5 2.6 1.8 2 0 0 2 2 2 1 C2H2-type zinc finger GAGA PF09237.11 ORF28234 - 0.0066 16.2 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 GAGA factor CH_2 PF06294.11 ORF28234 - 0.031 14.4 0.4 0.037 14.1 0.4 1.1 1 0 0 1 1 1 0 CH-like domain in sperm protein FPRL1_inhibitor PF16104.5 ORF28234 - 0.064 13.4 0.5 0.24 11.5 0.3 1.7 1 1 1 2 2 2 0 Formyl peptide receptor-like 1 inhibitory protein zf-C2H2_6 PF13912.6 ORF28234 - 0.065 13.2 1.9 0.1 12.6 1.9 1.3 1 0 0 1 1 1 0 C2H2-type zinc finger zf-CHY PF05495.12 ORF28234 - 0.07 13.6 2.6 0.084 13.4 2.6 1.3 1 1 0 1 1 1 0 CHY zinc finger Cytochrome_C7 PF14522.6 ORF28234 - 0.079 13.0 2.8 0.083 12.9 2.8 1.3 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c zf-BED PF02892.15 ORF28234 - 0.13 12.3 2.9 0.2 11.7 2.9 1.3 1 0 0 1 1 1 0 BED zinc finger zf-met PF12874.7 ORF28234 - 0.15 12.5 1.6 0.15 12.5 1.6 1.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF28234 - 0.45 10.9 5.5 0.23 11.8 2.8 2.0 1 1 1 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-H2C2_5 PF13909.6 ORF28234 - 0.62 9.9 12.2 0.91 9.3 7.5 2.9 2 1 0 2 2 2 0 C2H2-type zinc-finger domain DUF3934 PF13070.6 ORF27722 - 0.0055 17.2 0.4 0.0087 16.5 0.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3934) Clat_adaptor_s PF01217.20 ORF2632 - 0.58 10.1 4.3 0.66 9.9 4.3 1.0 1 0 0 1 1 1 0 Clathrin adaptor complex small chain DUF4969 PF16339.5 ORF26183 - 0.34 11.3 0.7 1 9.8 0.4 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4969) DUF4794 PF16042.5 ORF25784 - 0.068 14.2 0.0 0.11 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4794) FLILHELTA PF10306.9 ORF25716 - 0.13 12.7 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Hypothetical protein FLILHELTA Tet_JBP PF12851.7 ORF24417 - 0.19 11.0 0.3 0.21 10.9 0.3 1.0 1 0 0 1 1 1 0 Oxygenase domain of the 2OGFeDO superfamily DUF5398 PF17376.2 ORF24262 - 0.12 13.0 0.1 0.16 12.6 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5398) BT1 PF03092.16 ORF239 - 0.0038 15.5 0.4 0.0045 15.3 0.4 1.0 1 0 0 1 1 1 1 BT1 family DUF5433 PF17498.2 ORF239 - 0.047 13.9 0.8 0.058 13.6 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5433) KASH PF10541.9 ORF23862 - 0.081 13.2 0.3 0.081 13.2 0.3 1.5 2 0 0 2 2 2 0 Nuclear envelope localisation domain Mpv17_PMP22 PF04117.12 ORF23835 - 2.1e-06 27.9 0.5 3.2e-06 27.3 0.5 1.3 1 0 0 1 1 1 1 Mpv17 / PMP22 family Pro_Al_protease PF02983.14 ORF23783 - 0.016 15.3 0.5 0.038 14.1 0.2 1.7 2 0 0 2 2 2 0 Alpha-lytic protease prodomain DUF4519 PF15012.6 ORF23275 - 9.9 6.4 6.2 0.72 10.1 0.2 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4519) Adeno_E3_CR2 PF02439.15 ORF22659 - 3.1 7.7 6.9 6.6 6.6 3.0 2.2 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 DUF4131 PF13567.6 ORF22659 - 8.8 6.0 6.8 9.6 5.8 6.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) BC10 PF06726.12 ORF22451 - 0.034 14.4 1.5 7.5 6.9 0.1 2.2 2 0 0 2 2 2 0 Bladder cancer-related protein BC10 DUF432 PF04254.13 ORF21989 - 0.024 14.8 0.0 0.028 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF432) DUF5038 PF16441.5 ORF21611 - 0.024 14.6 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5038) 4HBT_2 PF13279.6 ORF21412 - 0.16 12.5 0.0 0.18 12.3 0.0 1.3 1 1 0 1 1 1 0 Thioesterase-like superfamily Tax PF02959.16 ORF20294 - 0.042 13.3 0.2 0.044 13.2 0.2 1.0 1 0 0 1 1 1 0 HTLV Tax Myb_DNA-binding PF00249.31 ORF20265 - 7.2e-10 38.9 0.4 9.3e-10 38.6 0.4 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF20265 - 7.8e-05 22.8 0.2 0.00013 22.2 0.2 1.5 1 1 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF20265 - 0.00012 21.9 1.4 0.00014 21.6 1.4 1.2 1 0 0 1 1 1 1 Myb DNA-binding like Leu_leader PF08054.11 ORF20259 - 0.22 11.1 1.5 5.4 6.7 0.0 2.5 2 0 0 2 2 2 0 Leucine operon leader peptide DUF2093 PF09866.9 ORF20095 - 0.042 13.3 2.7 3.9 7.0 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2093) DUF1441 PF07278.11 ORF19185 - 0.017 15.1 0.1 0.018 15.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1441) zf-C2H2_assoc3 PF16637.5 ORF19185 - 0.05 13.8 1.0 0.068 13.4 1.0 1.2 1 0 0 1 1 1 0 Putative zinc-finger between two C2H2 zinc-fingers on Patz NDT80_PhoG PF05224.12 ORF19068 - 0.23 11.7 0.0 0.23 11.7 0.0 1.1 1 0 0 1 1 1 0 NDT80 / PhoG like DNA-binding family DUF5323 PF17257.2 ORF18614 - 0.15 11.9 0.3 0.22 11.4 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5323) FYVE_2 PF02318.16 ORF18410 - 0.03 14.5 1.5 0.033 14.4 1.5 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger DNA_RNApol_7kD PF03604.13 ORF18410 - 0.64 9.8 5.7 0.14 11.9 1.5 2.1 3 0 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zf-IS66 PF13005.7 ORF18410 - 2.5 8.6 8.8 0.66 10.4 1.7 2.7 2 1 1 3 3 3 0 zinc-finger binding domain of transposase IS66 DUF4886 PF16227.5 ORF18195 - 0.094 11.9 0.1 0.098 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4886) Fer4_21 PF14697.6 ORF17524 - 4.7 7.4 13.3 0.17 12.1 6.0 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF4210 PF13915.6 ORF174 - 0.055 14.1 0.0 0.093 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) DUF3760 PF12586.8 ORF17044 - 0.011 15.9 0.7 0.017 15.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3760) DUF5375 PF17345.2 ORF16831 - 0.079 12.9 0.0 0.099 12.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5375) zn-ribbon_14 PF16503.5 ORF16735 - 0.044 13.3 0.8 0.073 12.6 0.8 1.3 1 0 0 1 1 1 0 Zinc-ribbon DUF2070 PF09843.9 ORF16712 - 0.68 8.1 15.2 0.72 8.1 15.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2847 PF11009.8 ORF16242 - 0.046 13.6 0.7 0.059 13.3 0.6 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2847) NifU PF01106.17 ORF16242 - 0.046 13.9 0.2 0.076 13.2 0.2 1.5 1 1 0 1 1 1 0 NifU-like domain DUF4798 PF16055.5 ORF16242 - 0.052 13.8 0.1 0.059 13.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4798) Thioredoxin_8 PF13905.6 ORF16242 - 0.07 13.5 0.1 0.077 13.3 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like CCDC53 PF10152.9 ORF16242 - 0.16 12.4 0.8 0.2 12.1 0.8 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex NinE PF05322.11 ORF15500 - 0.086 12.7 1.3 0.11 12.4 0.9 1.5 1 1 0 1 1 1 0 NINE Protein Mlo PF03094.15 ORF152761 - 0.019 13.4 0.1 0.024 13.0 0.1 1.1 1 0 0 1 1 1 0 Mlo family Peptidase_S11 PF00768.20 ORF1516 - 4.7e-07 29.5 0.0 4.9e-07 29.4 0.0 1.0 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Peptidase_C5 PF00770.18 ORF151341 - 0.076 12.7 4.6 0.08 12.6 4.6 1.1 1 0 0 1 1 1 0 Adenovirus endoprotease DUF4727 PF15856.5 ORF151341 - 0.33 10.5 6.4 0.16 11.5 4.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4727) zf-Tim10_DDP PF02953.15 ORF150412 - 0.092 12.4 0.3 0.15 11.7 0.3 1.3 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Utp12 PF04003.12 ORF150412 - 0.11 12.8 0.0 0.13 12.6 0.0 1.0 1 0 0 1 1 1 0 Dip2/Utp12 Family Phage_terminase PF10668.9 ORF150110 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Phage terminase small subunit Ribosomal_L22 PF00237.19 ORF149480 - 1.5 9.1 7.2 2.2 8.6 0.5 2.0 1 1 1 2 2 2 0 Ribosomal protein L22p/L17e PKD_3 PF16820.5 ORF148713 - 0.072 12.8 0.0 0.097 12.4 0.0 1.2 1 0 0 1 1 1 0 PKD-like domain ApbA PF02558.16 ORF148279 - 0.11 12.1 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF3891 PF13030.6 ORF148234 - 0.074 12.8 0.1 0.078 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3891) Ribosomal_S10 PF00338.22 ORF148177 - 0.084 13.1 0.0 0.09 13.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S10p/S20e ODV-E18 PF10717.9 ORF147236 - 9.8 6.1 7.4 3.7 7.5 3.4 1.8 1 1 1 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 Gypsy PF07253.11 ORF146789 - 0.009 14.6 0.2 0.011 14.4 0.2 1.1 1 0 0 1 1 1 1 Gypsy protein GBP_PSP PF02425.15 ORF146727 - 0.036 13.7 0.0 0.08 12.6 0.0 1.6 1 0 0 1 1 1 0 Paralytic/GBP/PSP peptide KptA_kDCL PF18176.1 ORF146511 - 0.012 15.5 0.1 0.013 15.4 0.1 1.1 1 0 0 1 1 1 0 KptA in kinetoplastid DICER domain DUF5038 PF16441.5 ORF146390 - 0.024 14.6 0.1 0.025 14.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5038) RBM1CTR PF08081.11 ORF14542 - 0.4 10.8 4.1 0.28 11.3 1.1 1.9 2 0 0 2 2 2 0 RBM1CTR (NUC064) family Pox_A14 PF05767.12 ORF14447 - 0.16 12.1 2.6 0.92 9.7 0.4 2.0 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 ZapD PF07072.11 ORF144243 - 4.3e-17 62.6 0.0 4.9e-17 62.4 0.0 1.0 1 0 0 1 1 1 1 Cell division protein DUF5060 PF16586.5 ORF144243 - 0.081 13.3 0.0 0.25 11.7 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5060) Fer4_9 PF13187.6 ORF144093 - 0.011 15.9 3.7 0.015 15.5 3.7 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF4834 PF16118.5 ORF143711 - 0.39 11.7 0.8 0.42 11.6 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) F_actin_bind PF08919.10 ORF14347 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 F-actin binding COG6 PF06419.11 ORF14347 - 0.21 9.7 0.0 0.21 9.8 0.0 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 Peptidase_M18 PF02127.15 ORF142664 - 0.15 10.8 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) Proteasom_Rpn13 PF04683.13 ORF14231 - 0.096 13.2 0.5 0.18 12.3 0.5 1.4 1 0 0 1 1 1 0 Proteasome complex subunit Rpn13 ubiquitin receptor SapB_2 PF03489.17 ORF142046 - 0.16 12.1 1.5 7 6.9 0.1 2.6 2 1 0 2 2 2 0 Saposin-like type B, region 2 CoA_transf_3 PF02515.17 ORF14191 - 8.2e-06 25.2 0.0 9.6e-06 24.9 0.0 1.1 1 0 0 1 1 1 1 CoA-transferase family III Phage_terminase PF10668.9 ORF141439 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Phage terminase small subunit OTT_1508_deam PF14441.6 ORF141433 - 5.7 7.0 11.5 6.2 6.9 1.1 2.1 1 1 1 2 2 2 0 OTT_1508-like deaminase DUF4522 PF15022.6 ORF140615 - 0.012 15.8 1.3 0.015 15.6 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) CBFB_NFYA PF02045.15 ORF139437 - 0.0031 18.1 3.9 0.0031 18.1 3.9 1.6 2 0 0 2 2 2 1 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B RST PF12174.8 ORF138572 - 0.18 11.7 1.9 0.47 10.4 0.0 2.2 2 1 0 3 3 3 0 RCD1-SRO-TAF4 (RST) plant domain Gp_dh_N PF00044.24 ORF138569 - 0.1 12.9 0.4 0.12 12.7 0.4 1.1 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DUF4441 PF14536.6 ORF138569 - 4.8 7.4 15.9 0.35 11.1 6.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4441) SelK_SelG PF10961.8 ORF138394 - 3.2 8.4 4.3 4.4 8.0 4.3 1.4 1 1 0 1 1 1 0 Selenoprotein SelK_SelG CBP_BcsF PF11120.8 ORF1377 - 0.029 14.5 2.3 3.5 7.8 0.4 2.2 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsF zf-CCCH PF00642.24 ORF137312 - 0.015 15.2 0.3 0.27 11.2 0.2 2.3 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) CagE_TrbE_VirB PF03135.14 ORF136657 - 0.049 13.7 0.1 0.052 13.6 0.1 1.2 1 0 0 1 1 1 0 CagE, TrbE, VirB family, component of type IV transporter system DUF4680 PF15730.5 ORF136555 - 0.09 13.1 2.4 0.12 12.8 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4680) OxoGdeHyase_C PF16870.5 ORF135965 - 1.8e-25 89.4 0.1 1.9e-25 89.3 0.1 1.0 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks346.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks346.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks346.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks346.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2380 PF09533.10 ORF135251 - 0.15 11.6 1.1 0.17 11.5 1.1 1.1 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) DUF4306 PF14154.6 ORF13512 - 0.042 14.0 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4306) Asp_protease_2 PF13650.6 ORF134488 - 0.1 13.3 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 Aspartyl protease zf-Tim10_DDP PF02953.15 ORF134270 - 0.094 12.4 0.2 0.16 11.6 0.2 1.3 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Utp12 PF04003.12 ORF134270 - 0.13 12.6 0.0 0.14 12.5 0.0 1.0 1 0 0 1 1 1 0 Dip2/Utp12 Family zf-Tim10_DDP PF02953.15 ORF134214 - 0.28 10.9 5.8 3.9 7.2 0.5 2.4 2 1 0 2 2 2 0 Tim10/DDP family zinc finger 3-alpha PF03475.14 ORF134133 - 0.0068 16.2 0.2 0.012 15.4 0.2 1.4 1 0 0 1 1 1 1 3-alpha domain DUF3339 PF11820.8 ORF133389 - 0.17 12.1 0.0 0.26 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3339) UPF0515 PF15135.6 ORF13251 - 0.08 12.3 0.0 0.088 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 DUF4522 PF15022.6 ORF132450 - 0.012 15.8 1.3 0.015 15.6 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) TEX19 PF15553.6 ORF131972 - 0.046 13.7 0.2 0.046 13.7 0.2 1.0 1 0 0 1 1 1 0 Testis-expressed protein 19 SelK_SelG PF10961.8 ORF130822 - 3.2 8.4 4.3 4.4 8.0 4.3 1.4 1 1 0 1 1 1 0 Selenoprotein SelK_SelG Ank_2 PF12796.7 ORF129281 - 0.0023 18.5 0.0 0.0027 18.3 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF129281 - 0.01 16.3 0.0 0.1 13.2 0.0 2.3 2 1 1 3 3 3 0 Ankyrin repeat FSAP_sig_propep PF03032.15 ORF128824 - 2.3 8.3 6.6 2.3 8.3 5.3 1.7 1 1 0 1 1 1 0 Frog skin active peptide family signal and propeptide AstA PF04958.12 ORF128152 - 0.068 11.7 0.0 0.089 11.3 0.0 1.1 1 0 0 1 1 1 0 Arginine N-succinyltransferase beta subunit DUF3760 PF12586.8 ORF127853 - 0.011 15.9 0.7 0.017 15.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3760) DrsE PF02635.15 ORF127723 - 0.19 12.1 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 DsrE/DsrF-like family FXa_inhibition PF14670.6 ORF127292 - 0.17 12.2 5.4 0.2 12.0 0.2 2.6 3 0 0 3 3 3 0 Coagulation Factor Xa inhibitory site zf-H3C2 PF16721.5 ORF127208 - 0.053 13.9 2.9 0.064 13.6 2.2 1.5 1 1 0 1 1 1 0 Zinc-finger like, probable DNA-binding YuzL PF14115.6 ORF126452 - 0.073 13.6 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 YuzL-like protein DUF2103 PF09876.9 ORF126327 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2103) Thioredoxin PF00085.20 ORF125688 - 0.051 13.6 0.1 0.061 13.3 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin ThiC-associated PF13667.6 ORF124698 - 0.011 15.5 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 ThiC-associated domain CAP59_mtransfer PF11735.8 ORF12449 - 0.12 12.0 0.1 0.14 11.8 0.1 1.0 1 0 0 1 1 1 0 Cryptococcal mannosyltransferase 1 Leu_leader PF08054.11 ORF123935 - 0.55 9.9 4.0 0.31 10.7 1.9 1.6 2 0 0 2 2 2 0 Leucine operon leader peptide RNA_POL_M_15KD PF02150.16 ORF123852 - 0.0078 16.1 0.9 2.8 7.9 0.0 2.4 2 0 0 2 2 2 2 RNA polymerases M/15 Kd subunit zinc_ribbon_4 PF13717.6 ORF123852 - 0.06 13.3 7.2 0.071 13.0 1.6 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Phage_holin_2_1 PF04971.12 ORF12379 - 0.0086 16.1 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Bacteriophage P21 holin S zf-NADH-PPase PF09297.11 ORF122595 - 0.0048 16.5 0.2 0.048 13.3 0.0 2.1 2 0 0 2 2 2 1 NADH pyrophosphatase zinc ribbon domain zf-LITAF-like PF10601.9 ORF122595 - 0.0067 16.7 0.8 2.5 8.4 0.2 2.1 2 0 0 2 2 2 2 LITAF-like zinc ribbon domain Nudix_N_2 PF14803.6 ORF122595 - 0.02 14.8 2.2 2.9 7.9 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal zf-C4_Topoisom PF01396.19 ORF122595 - 0.026 14.3 2.1 0.13 12.1 0.1 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.6 ORF122595 - 0.029 13.8 2.3 0.21 11.0 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF122595 - 0.042 13.8 1.0 0.3 11.1 0.0 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Auto_anti-p27 PF06677.12 ORF122595 - 0.042 14.0 1.6 2.6 8.3 0.0 2.3 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_9 PF14369.6 ORF122595 - 0.057 13.7 0.8 0.35 11.2 0.1 2.0 2 0 0 2 2 2 0 zinc-ribbon zf-BED PF02892.15 ORF122595 - 0.078 13.0 3.0 3.4 7.8 0.0 2.2 1 1 1 2 2 2 0 BED zinc finger Cys_rich_KTR PF14205.6 ORF122595 - 0.1 12.4 1.2 2 8.3 0.0 2.3 2 1 0 2 2 2 0 Cysteine-rich KTR zf-ACC PF17848.1 ORF122595 - 0.14 12.2 2.7 8.7 6.5 0.1 2.3 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain A2L_zn_ribbon PF08792.10 ORF122595 - 0.15 11.8 0.2 0.15 11.8 0.2 2.0 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-RRN7 PF11781.8 ORF122595 - 0.22 11.2 0.2 0.22 11.2 0.2 2.1 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-C2H2_4 PF13894.6 ORF122595 - 0.37 11.8 2.5 1.1 10.2 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger UPF0102 PF02021.17 ORF12179 - 3.3e-12 46.4 0.1 3.7e-12 46.3 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 Gypsy PF07253.11 ORF121529 - 0.009 14.6 0.2 0.011 14.4 0.2 1.1 1 0 0 1 1 1 1 Gypsy protein SYS1 PF09801.9 ORF121007 - 0.044 13.9 0.7 0.049 13.8 0.7 1.1 1 0 0 1 1 1 0 Integral membrane protein S linking to the trans Golgi network HSCB_C PF07743.13 ORF120767 - 0.0028 18.1 2.7 0.0041 17.6 2.4 1.5 1 1 0 1 1 1 1 HSCB C-terminal oligomerisation domain GIT_CC PF16559.5 ORF120767 - 0.026 14.4 0.5 0.044 13.7 0.5 1.3 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor PLC-beta_C PF08703.10 ORF120767 - 0.1 12.6 6.0 0.44 10.5 1.2 2.0 1 1 1 2 2 2 0 PLC-beta C terminal SAM_1 PF00536.30 ORF120767 - 0.11 13.0 0.2 0.14 12.7 0.2 1.2 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Phage_Mu_Gam PF07352.12 ORF120767 - 0.12 12.3 3.5 0.27 11.1 3.3 1.7 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein XhlA PF10779.9 ORF120767 - 0.22 11.7 6.6 0.26 11.5 4.4 1.8 1 1 1 2 2 2 0 Haemolysin XhlA TMPIT PF07851.13 ORF120767 - 0.24 10.6 0.8 0.23 10.7 0.8 1.1 1 0 0 1 1 1 0 TMPIT-like protein Phytochelatin PF05023.14 ORF11980 - 0.019 14.2 0.0 0.019 14.2 0.0 1.2 1 0 0 1 1 1 0 Phytochelatin synthase TraT PF05818.12 ORF119354 - 0.15 11.7 0.3 0.16 11.7 0.3 1.0 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein Tax PF02959.16 ORF118546 - 0.042 13.3 0.2 0.044 13.2 0.2 1.0 1 0 0 1 1 1 0 HTLV Tax WAP PF00095.21 ORF118337 - 0.24 11.8 13.0 0.1 13.0 9.2 2.0 2 0 0 2 2 2 0 WAP-type (Whey Acidic Protein) 'four-disulfide core' CDO_I PF05995.12 ORF118337 - 0.52 9.6 1.6 4.4 6.6 0.8 1.9 1 1 1 2 2 2 0 Cysteine dioxygenase type I AMP-binding PF00501.28 ORF118316 - 0.064 11.8 0.0 0.071 11.7 0.0 1.0 1 0 0 1 1 1 0 AMP-binding enzyme UL17 PF17640.2 ORF118069 - 0.12 12.4 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized UL17 Pox_F15 PF04596.12 ORF116817 - 0.021 14.6 0.3 0.024 14.4 0.3 1.2 1 0 0 1 1 1 0 Poxvirus protein F15 NDUFA12 PF05071.16 ORF116702 - 0.14 13.0 0.0 0.16 12.9 0.0 1.1 1 0 0 1 1 1 0 NADH ubiquinone oxidoreductase subunit NDUFA12 baeRF_family5 PF18846.1 ORF116586 - 0.014 15.6 0.5 0.015 15.5 0.5 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 5 DUF4710 PF15828.5 ORF116586 - 0.65 10.1 5.9 0.61 10.2 5.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4710) RAMA PF18755.1 ORF116278 - 0.13 12.7 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Restriction Enzyme Adenine Methylase Associated DUF3927 PF13064.6 ORF113854 - 0.17 11.9 1.2 4.2 7.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3927) TEX15 PF15326.6 ORF113655 - 0.046 13.4 0.2 0.057 13.1 0.2 1.0 1 0 0 1 1 1 0 Testis expressed sequence 15 DUF2142 PF09913.9 ORF113655 - 0.16 10.8 2.9 0.15 10.9 2.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) Filament_head PF04732.14 ORF111170 - 0.07 14.0 3.2 0.086 13.7 3.2 1.1 1 0 0 1 1 1 0 Intermediate filament head (DNA binding) region zn-ribbon_14 PF16503.5 ORF110622 - 0.044 13.3 0.8 0.073 12.6 0.8 1.3 1 0 0 1 1 1 0 Zinc-ribbon HIG_1_N PF04588.13 ORF10986 - 0.029 14.6 0.2 0.042 14.1 0.2 1.3 1 0 0 1 1 1 0 Hypoxia induced protein conserved region DUF4400 PF14348.6 ORF109231 - 0.24 10.9 1.5 0.36 10.3 1.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) Ribosomal_L28 PF00830.19 ORF109091 - 1.8e-25 88.9 1.7 2.1e-25 88.7 1.7 1.1 1 0 0 1 1 1 1 Ribosomal L28 family RGS-like PF09128.11 ORF108833 - 0.05 13.3 0.2 0.054 13.2 0.2 1.1 1 0 0 1 1 1 0 Regulator of G protein signalling-like domain zf-C2HC5 PF06221.13 ORF108599 - 0.017 15.1 0.2 0.022 14.8 0.2 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type OrfB_Zn_ribbon PF07282.11 ORF108599 - 0.039 13.9 1.1 0.058 13.3 1.1 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain BLOC1_2 PF10046.9 ORF108557 - 0.036 14.4 1.1 0.084 13.2 0.4 1.8 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ICA69 PF04629.14 ORF108557 - 0.18 12.1 2.6 0.59 10.4 2.6 1.7 1 1 0 1 1 1 0 Islet cell autoantigen ICA69, C-terminal domain TBP PF00352.21 ORF10824 - 7.4e-21 73.9 0.0 8.2e-21 73.8 0.0 1.0 1 0 0 1 1 1 1 Transcription factor TFIID (or TATA-binding protein, TBP) SUA5 PF03481.13 ORF10824 - 0.018 15.6 0.0 0.018 15.6 0.0 1.1 1 0 0 1 1 1 0 Putative GTP-binding controlling metal-binding Pox_A14 PF05767.12 ORF108159 - 0.16 12.1 2.6 0.92 9.7 0.4 2.0 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 DUF5525 PF17663.1 ORF10779 - 0.036 12.2 0.0 0.041 12.0 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) ArenaCapSnatch PF17296.2 ORF107638 - 0.029 13.8 0.1 0.031 13.7 0.1 1.1 1 0 0 1 1 1 0 Arenavirus cap snatching domain DUF3404 PF11884.8 ORF107472 - 2.7 7.1 4.9 3.3 6.8 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) DLH PF01738.18 ORF107373 - 0.013 15.0 0.0 0.014 15.0 0.0 1.0 1 0 0 1 1 1 0 Dienelactone hydrolase family Hydrolase_4 PF12146.8 ORF107373 - 0.091 12.0 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Albumin_I PF08027.11 ORF107165 - 0.015 14.9 1.2 0.015 14.9 1.2 2.6 2 1 1 3 3 3 0 Albumin I chain b SURF4 PF02077.15 ORF106188 - 0.035 13.7 1.4 0.041 13.5 1.4 1.0 1 0 0 1 1 1 0 SURF4 family Adeno_E3_CR2 PF02439.15 ORF105511 - 3.1 7.7 6.9 6.6 6.6 3.0 2.2 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 DUF4131 PF13567.6 ORF105511 - 8.8 6.0 6.8 9.6 5.8 6.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) MerB PF03243.15 ORF104931 - 0.061 13.5 0.4 0.067 13.3 0.4 1.1 1 0 0 1 1 1 0 Alkylmercury lyase CMV_US PF08001.11 ORF104790 - 0.12 11.6 1.3 0.12 11.6 1.3 1.0 1 0 0 1 1 1 0 CMV US Leu_Phe_trans PF03588.14 ORF104724 - 0.056 13.0 1.6 0.066 12.7 1.6 1.0 1 0 0 1 1 1 0 Leucyl/phenylalanyl-tRNA protein transferase AAA_14 PF13173.6 ORF104724 - 0.07 13.2 0.4 0.088 12.9 0.4 1.5 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF104037 - 0.025 15.0 0.5 0.027 14.8 0.5 1.1 1 0 0 1 1 1 0 RNA helicase ATG16 PF08614.11 ORF104016 - 0.0019 18.5 5.4 0.002 18.4 5.4 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) KxDL PF10241.9 ORF104016 - 0.0022 18.2 3.4 0.0028 17.9 3.4 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein DHOase PF12890.7 ORF104016 - 0.1 12.5 0.2 0.12 12.3 0.2 1.2 1 0 0 1 1 1 0 Dihydro-orotase-like SlyX PF04102.12 ORF104016 - 0.22 12.2 2.3 0.35 11.5 2.3 1.4 1 1 0 1 1 1 0 SlyX DUF1664 PF07889.12 ORF104016 - 0.43 10.6 5.3 0.46 10.5 5.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2312 PF10073.9 ORF104016 - 0.85 9.3 7.1 1.8 8.2 3.9 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Saf_2TM PF18303.1 ORF103968 - 0.87 9.2 3.8 0.94 9.1 3.8 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain DUF3487 PF11990.8 ORF103968 - 1.3 8.9 5.3 1.7 8.5 5.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) FtsX PF02687.21 ORF103968 - 1.6 9.3 8.5 2.3 8.8 8.5 1.3 1 0 0 1 1 1 0 FtsX-like permease family DUF4083 PF13314.6 ORF103968 - 2.4 8.2 7.5 1.5 8.8 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) Baculo_LEF-3 PF05847.11 ORF103224 - 0.016 14.4 0.2 0.016 14.4 0.2 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus late expression factor 3 (LEF-3) YhdX PF17444.2 ORF103187 - 0.17 11.8 0.2 0.25 11.2 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized YhdX-like Phage_holin_3_6 PF07332.11 ORF102858 - 0.06 13.4 2.2 0.071 13.2 2.2 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III PDR_assoc PF08370.11 ORF102858 - 0.88 9.4 7.3 5.2 6.9 0.0 2.2 2 0 0 2 2 2 0 Plant PDR ABC transporter associated LptF_LptG PF03739.14 ORF102858 - 2.4 6.9 7.4 2.9 6.7 7.4 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG DUF4131 PF13567.6 ORF102858 - 7.7 6.1 6.1 8.9 5.9 6.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) BLOC1_2 PF10046.9 ORF10179 - 0.036 14.4 1.1 0.084 13.2 0.4 1.8 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ICA69 PF04629.14 ORF10179 - 0.18 12.1 2.6 0.59 10.4 2.6 1.7 1 1 0 1 1 1 0 Islet cell autoantigen ICA69, C-terminal domain 7TM_GPCR_Srz PF10325.9 ORF10050 - 0.0084 15.5 1.4 0.0098 15.3 1.4 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srz Adeno_PV PF03910.13 NODE_69215_length_229_cov_0.819588_g61274_i0reverse_frame_1 - 0.54 8.9 1.3 0.59 8.8 1.3 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV Nab1 PF04902.12 NODE_69211_length_229_cov_0.824742_g61270_i0forward_frame_1 - 0.064 13.7 0.0 0.069 13.6 0.0 1.0 1 0 0 1 1 1 0 Conserved region in Nab1 PspB PF06667.12 NODE_69202_length_229_cov_0.927835_g61261_i0reverse_frame_1 - 0.41 10.7 3.0 0.57 10.3 3.0 1.2 1 0 0 1 1 1 0 Phage shock protein B Pkinase PF00069.25 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 2.9e-10 40.0 0.2 2.9e-10 40.0 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 7.5e-05 22.1 0.1 8.1e-05 22.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 0.00063 19.2 0.4 0.00068 19.1 0.4 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 0.0017 17.2 0.1 0.0017 17.2 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_1 - 0.0061 15.9 0.1 0.0062 15.9 0.1 1.1 1 0 0 1 1 1 1 Kinase-like ARL2_Bind_BART PF11527.8 NODE_69194_length_229_cov_1.030928_g61253_i0reverse_frame_1 - 0.01 15.9 1.1 0.011 15.9 1.1 1.1 1 0 0 1 1 1 0 The ARF-like 2 binding protein BART CCER1 PF15482.6 NODE_69189_length_229_cov_1.139175_g61248_i0forward_frame_1 - 0.11 12.4 0.9 0.12 12.3 0.9 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 Med19 PF10278.9 NODE_69187_length_229_cov_1.175258_g61246_i0reverse_frame_1 - 2.2 8.2 8.7 2.7 7.9 8.7 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 pKID PF02173.17 NODE_69187_length_229_cov_1.175258_g61246_i0forward_frame_1 - 0.058 12.9 1.4 0.058 12.9 1.4 1.7 2 0 0 2 2 2 0 pKID domain DUF4282 PF14110.6 NODE_69185_length_229_cov_1.180412_g61244_i0forward_frame_1 - 0.0099 16.6 1.1 0.012 16.4 1.1 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4282) Lamprin PF06403.11 NODE_69183_length_229_cov_1.201031_g61242_i0reverse_frame_1 - 0.018 15.0 0.1 0.018 15.0 0.1 1.1 1 0 0 1 1 1 0 Lamprin AcylCoA_dehyd_C PF12186.8 NODE_69163_length_229_cov_1.252577_g61222_i0reverse_frame_1 - 0.21 11.7 0.0 0.25 11.5 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase C terminal DUF2576 PF10845.8 NODE_69163_length_229_cov_1.252577_g61222_i0forward_frame_1 - 7.1 6.3 6.3 6.2 6.5 0.8 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF2576) UL45 PF05473.12 NODE_69159_length_229_cov_1.293814_g61218_i0forward_frame_1 - 2.1 7.9 5.2 2.7 7.6 5.2 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF3514 PF12027.8 NODE_69158_length_229_cov_1.293814_g61217_i0reverse_frame_1 - 0.012 15.4 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3514) Kunitz_BPTI PF00014.23 NODE_69158_length_229_cov_1.293814_g61217_i0reverse_frame_1 - 0.098 12.9 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Kunitz/Bovine pancreatic trypsin inhibitor domain POLO_box PF00659.18 NODE_69155_length_229_cov_1.309278_g61214_i0reverse_frame_1 - 0.11 12.7 0.9 0.14 12.4 0.2 1.6 2 0 0 2 2 2 0 POLO box duplicated region SVM_signal PF12113.8 NODE_69155_length_229_cov_1.309278_g61214_i0forward_frame_1 - 0.78 9.7 4.6 0.24 11.3 1.4 1.7 2 0 0 2 2 2 0 SVM protein signal sequence Glyco_trans_1_4 PF13692.6 NODE_69144_length_229_cov_1.386598_g61203_i0forward_frame_1 - 0.0011 19.4 0.0 0.0013 19.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 NODE_69144_length_229_cov_1.386598_g61203_i0forward_frame_1 - 0.15 11.6 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 Pox_A3L PF05288.11 NODE_69142_length_229_cov_1.402062_g61201_i0reverse_frame_1 - 0.11 12.5 0.1 8.1 6.5 0.0 2.1 2 0 0 2 2 2 0 Poxvirus A3L Protein DUF5389 PF17364.2 NODE_69138_length_229_cov_1.412371_g61197_i0forward_frame_1 - 0.0064 16.5 0.2 0.0075 16.3 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5389) DUF4307 PF14155.6 NODE_69137_length_229_cov_1.443299_g61196_i0reverse_frame_1 - 0.052 13.4 0.2 0.077 12.8 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4307) PT PF04886.12 NODE_69135_length_229_cov_1.458763_g61194_i0reverse_frame_1 - 0.049 13.2 7.4 0.081 12.5 7.4 1.3 1 0 0 1 1 1 0 PT repeat DUF4735 PF15882.5 NODE_69135_length_229_cov_1.458763_g61194_i0reverse_frame_1 - 0.13 11.6 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4735) Chordopox_A33R PF05966.12 NODE_69131_length_229_cov_1.479381_g61190_i0reverse_frame_1 - 0.023 14.0 0.3 0.025 13.9 0.3 1.0 1 0 0 1 1 1 0 Chordopoxvirus A33R protein DUF3514 PF12027.8 NODE_69129_length_229_cov_1.500000_g61188_i0reverse_frame_1 - 0.012 15.4 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3514) Kunitz_BPTI PF00014.23 NODE_69129_length_229_cov_1.500000_g61188_i0reverse_frame_1 - 0.093 13.0 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Kunitz/Bovine pancreatic trypsin inhibitor domain zf-C2HC5 PF06221.13 NODE_69128_length_229_cov_1.505155_g61187_i0forward_frame_1 - 0.036 14.0 0.1 0.054 13.5 0.1 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type Nudix_N_2 PF14803.6 NODE_69128_length_229_cov_1.505155_g61187_i0forward_frame_1 - 0.89 9.5 0.1 0.89 9.5 0.1 3.0 4 0 0 4 4 4 0 Nudix N-terminal Pox_EPC_I2-L1 PF12575.8 NODE_69120_length_229_cov_1.608247_g61179_i0forward_frame_1 - 0.053 13.7 0.7 0.063 13.5 0.7 1.1 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 Toxin_19 PF08088.12 NODE_69118_length_229_cov_1.613402_g61177_i0reverse_frame_1 - 0.035 14.2 0.1 0.035 14.2 0.1 1.7 2 1 0 2 2 2 0 Conotoxin I-superfamily DarT PF14487.6 NODE_69111_length_229_cov_1.634021_g61170_i0reverse_frame_1 - 0.057 13.2 0.0 0.063 13.1 0.0 1.2 1 0 0 1 1 1 0 ssDNA thymidine ADP-ribosyltransferase, DarT AMA-1 PF02430.15 NODE_69111_length_229_cov_1.634021_g61170_i0forward_frame_1 - 0.092 11.7 1.1 0.099 11.6 1.1 1.0 1 0 0 1 1 1 0 Apical membrane antigen 1 RVT_1 PF00078.27 NODE_69107_length_229_cov_1.639175_g61166_i0reverse_frame_1 - 2.2e-11 43.7 0.0 2.3e-11 43.7 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) VIT PF08487.10 NODE_69100_length_229_cov_1.649485_g61159_i0reverse_frame_1 - 0.00076 19.7 0.0 0.0009 19.4 0.0 1.1 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain IMPa_helical PF18642.1 NODE_69099_length_229_cov_1.654639_g61158_i0forward_frame_1 - 0.029 14.8 0.1 0.035 14.5 0.1 1.1 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain Pombe_5TM PF09437.10 NODE_69097_length_229_cov_1.695876_g61156_i0reverse_frame_1 - 0.023 14.4 2.8 0.026 14.2 2.8 1.1 1 0 0 1 1 1 0 Pombe specific 5TM protein Phage_holin_T PF11031.8 NODE_69096_length_229_cov_1.695876_g61155_i0reverse_frame_1 - 0.063 12.8 0.6 0.07 12.6 0.6 1.1 1 0 0 1 1 1 0 Bacteriophage T holin BfiI_DBD PF18243.1 NODE_69094_length_229_cov_1.716495_g61153_i0forward_frame_1 - 0.057 13.0 0.5 0.06 12.9 0.5 1.1 1 0 0 1 1 1 0 Metal-independent restriction enzyme BfiI DNA binding domain IMS PF00817.20 NODE_69091_length_229_cov_1.757732_g61150_i0forward_frame_1 - 0.011 15.8 0.1 0.013 15.5 0.1 1.0 1 0 0 1 1 1 0 impB/mucB/samB family LRR_6 PF13516.6 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 4.8e-06 26.2 0.2 0.0066 16.4 0.0 3.1 3 0 0 3 3 3 2 Leucine Rich repeat LRR_4 PF12799.7 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 0.00074 19.9 2.5 0.028 14.9 0.4 2.5 2 0 0 2 2 2 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 0.0047 16.7 2.5 0.3 10.9 0.3 2.4 2 1 0 2 2 2 2 Leucine rich repeat FNIP PF05725.12 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 0.01 16.0 1.4 2 8.6 0.1 3.0 3 0 0 3 3 3 0 FNIP Repeat LRR_1 PF00560.33 NODE_69089_length_229_cov_1.778351_g61148_i0forward_frame_1 - 0.081 13.5 4.3 0.78 10.5 0.6 3.0 2 2 0 2 2 2 0 Leucine Rich Repeat HTH_28 PF13518.6 NODE_69080_length_229_cov_1.829897_g61139_i0reverse_frame_1 - 0.18 11.9 0.2 0.18 11.9 0.2 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain Biopterin_H PF00351.21 NODE_69079_length_229_cov_1.835052_g61138_i0forward_frame_1 - 0.053 12.6 0.1 0.055 12.5 0.1 1.0 1 0 0 1 1 1 0 Biopterin-dependent aromatic amino acid hydroxylase Fam20C PF06702.12 NODE_69075_length_229_cov_1.850515_g61134_i0reverse_frame_1 - 0.042 13.7 0.2 0.048 13.5 0.2 1.0 1 0 0 1 1 1 0 Golgi casein kinase, C-terminal, Fam20 Peptidase_M48 PF01435.18 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 1.2e-19 70.9 0.3 1.3e-19 70.8 0.3 1.0 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 2e-05 23.9 0.0 2e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 BlaR1 peptidase M56 Peptidase_M1 PF01433.20 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 0.0022 17.6 0.0 0.0024 17.5 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M1 domain SprT-like PF10263.9 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 0.057 13.3 0.0 0.064 13.1 0.0 1.1 1 0 0 1 1 1 0 SprT-like family DUF2201_N PF13203.6 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_1 - 0.2 11.2 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain DUF413 PF04219.12 NODE_69070_length_229_cov_1.865979_g61129_i0forward_frame_1 - 0.022 14.8 0.0 0.023 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF Frigida PF07899.11 NODE_69068_length_229_cov_1.891753_g61127_i0reverse_frame_1 - 0.11 11.7 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Frigida-like protein PUF PF00806.19 NODE_69059_length_229_cov_2.005155_g61118_i0reverse_frame_1 - 0.092 12.5 0.2 0.19 11.5 0.2 1.4 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat TMIE PF16038.5 NODE_69056_length_229_cov_2.025773_g61115_i0forward_frame_1 - 0.023 14.5 0.2 0.031 14.1 0.2 1.1 1 0 0 1 1 1 0 TMIE protein Phe_tRNA-synt_N PF02912.18 NODE_69055_length_229_cov_2.030928_g61114_i0forward_frame_1 - 3.1e-16 59.1 3.1 3.9e-16 58.7 3.1 1.1 1 0 0 1 1 1 1 Aminoacyl tRNA synthetase class II, N-terminal domain FAD-oxidase_C PF02913.19 NODE_69055_length_229_cov_2.030928_g61114_i0forward_frame_1 - 0.018 14.7 0.0 0.019 14.6 0.0 1.0 1 0 0 1 1 1 0 FAD linked oxidases, C-terminal domain SCAPER_N PF16501.5 NODE_69054_length_229_cov_2.046392_g61113_i0reverse_frame_1 - 0.23 11.5 0.4 0.25 11.4 0.4 1.2 1 0 0 1 1 1 0 S phase cyclin A-associated protein in the endoplasmic reticulum Tir_receptor_N PF07490.11 NODE_69047_length_229_cov_2.097938_g61106_i0reverse_frame_1 - 0.19 11.5 2.5 0.22 11.3 2.5 1.1 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) N-terminus zf-C2H2_10 PF16588.5 NODE_69041_length_229_cov_2.201031_g61100_i0reverse_frame_1 - 0.065 13.0 0.5 0.13 12.0 0.5 1.5 1 0 0 1 1 1 0 C2H2 zinc-finger MRP-S24 PF14955.6 NODE_69039_length_229_cov_2.231959_g61098_i0forward_frame_1 - 1.2 9.1 5.0 1.4 8.9 5.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S24 TMCO5 PF14992.6 NODE_69034_length_229_cov_2.314433_g61093_i0reverse_frame_1 - 7.4 6.1 6.2 8.3 5.9 6.2 1.2 1 0 0 1 1 1 0 TMCO5 family DUF3427 PF11907.8 NODE_69032_length_229_cov_2.350515_g61091_i0reverse_frame_1 - 0.0065 15.8 0.0 0.0076 15.6 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3427) TRAP_beta PF05753.14 NODE_69032_length_229_cov_2.350515_g61091_i0forward_frame_1 - 0.091 12.2 0.6 0.12 11.7 0.6 1.2 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) Fimbrial PF00419.20 NODE_69030_length_229_cov_2.355670_g61089_i0reverse_frame_1 - 9.4e-07 29.2 0.0 1e-06 29.1 0.0 1.0 1 0 0 1 1 1 1 Fimbrial protein C_LFY_FLO PF17538.2 NODE_69029_length_229_cov_2.463918_g61088_i0reverse_frame_1 - 0.096 12.2 0.1 0.13 11.7 0.1 1.2 1 0 0 1 1 1 0 DNA Binding Domain (C-terminal) Leafy/Floricaula DUF2570 PF10828.8 NODE_69024_length_229_cov_2.680412_g61083_i0reverse_frame_1 - 0.061 13.1 0.1 0.086 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) ENOD40 PF08247.11 NODE_69020_length_229_cov_2.881443_g61079_i0forward_frame_1 - 2 8.6 9.3 3 8.0 0.7 3.3 3 0 0 3 3 3 0 ENOD40 protein PH PF00169.29 NODE_69019_length_229_cov_2.927835_g61078_i0forward_frame_1 - 6.7e-07 29.8 0.4 9.1e-07 29.3 0.4 1.2 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 NODE_69019_length_229_cov_2.927835_g61078_i0forward_frame_1 - 0.014 15.8 0.3 0.018 15.5 0.3 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain Pkinase PF00069.25 NODE_69017_length_229_cov_3.237113_g61076_i0reverse_frame_1 - 7.9e-12 45.1 0.0 8.2e-12 45.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69017_length_229_cov_3.237113_g61076_i0reverse_frame_1 - 0.0047 16.2 0.0 0.0047 16.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_69017_length_229_cov_3.237113_g61076_i0reverse_frame_1 - 0.25 10.6 0.0 0.26 10.6 0.0 1.0 1 0 0 1 1 1 0 Kinase-like HemY_N PF07219.13 NODE_69016_length_229_cov_3.283505_g61075_i0reverse_frame_1 - 0.53 10.5 5.2 0.82 9.9 5.2 1.3 1 0 0 1 1 1 0 HemY protein N-terminus SP_C-Propep PF08999.10 NODE_69016_length_229_cov_3.283505_g61075_i0reverse_frame_1 - 3.2 7.6 11.3 4 7.3 11.2 1.4 1 1 0 1 1 1 0 Surfactant protein C, N terminal propeptide HeH PF12949.7 NODE_69011_length_229_cov_3.530928_g61070_i0reverse_frame_1 - 0.036 13.8 0.0 0.054 13.2 0.0 1.3 1 0 0 1 1 1 0 HeH/LEM domain ChaC PF04752.12 NODE_69010_length_229_cov_3.556701_g61069_i0forward_frame_1 - 0.18 11.9 0.4 0.97 9.5 0.2 1.9 1 1 1 2 2 2 0 ChaC-like protein EccE PF11203.8 NODE_69006_length_229_cov_4.180412_g61065_i0forward_frame_1 - 0.037 14.3 1.4 0.04 14.3 1.4 1.1 1 0 0 1 1 1 0 Putative type VII ESX secretion system translocon, EccE DUF2664 PF10867.8 NODE_69004_length_229_cov_4.747423_g61063_i0forward_frame_1 - 0.081 13.4 0.0 0.11 13.0 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2664) IFT57 PF10498.9 NODE_69003_length_229_cov_5.695876_g61062_i0reverse_frame_1 - 0.049 12.6 0.1 0.059 12.3 0.1 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 IQ PF00612.27 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 3.1e-05 23.4 15.3 0.039 13.7 1.1 3.4 3 0 0 3 3 3 3 IQ calmodulin-binding motif DUF5617 PF18493.1 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 0.017 15.2 0.4 0.021 14.9 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) TIP49 PF06068.13 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 0.11 11.7 3.9 0.11 11.7 3.9 1.0 1 0 0 1 1 1 0 TIP49 P-loop domain PDDEXK_10 PF07788.11 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 0.77 9.7 7.0 4.1 7.4 7.0 2.0 1 1 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Ribosomal_S17 PF00366.20 NODE_69001_length_229_cov_10.922680_g61060_i0forward_frame_1 - 7.1 6.8 11.6 0.77 9.9 4.3 2.1 1 1 1 2 2 2 0 Ribosomal protein S17 TssO PF17561.2 NODE_69000_length_229_cov_30.118557_g61059_i0forward_frame_1 - 0.43 10.7 7.0 0.46 10.6 7.0 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO Pex24p PF06398.11 NODE_68997_length_229_cov_33.819588_g61056_i0forward_frame_1 - 0.078 12.0 0.1 0.095 11.7 0.1 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin R-HINP1I PF11463.8 NODE_68997_length_229_cov_33.819588_g61056_i0forward_frame_1 - 0.14 11.6 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 R.HinP1I restriction endonuclease Transp_Tc5_C PF04236.15 NODE_68994_length_229_cov_36.644330_g61053_i0reverse_frame_1 - 0.054 13.8 0.9 0.079 13.3 0.9 1.3 1 0 0 1 1 1 0 Tc5 transposase C-terminal domain Secretin_N_2 PF07655.13 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_1 - 8.3 7.0 21.8 12 6.6 21.8 1.2 1 0 0 1 1 1 0 Secretin N-terminal domain DUF3301 PF11743.8 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 0.008 15.8 0.4 0.0097 15.6 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3301) DUF4834 PF16118.5 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 0.095 13.7 1.2 0.12 13.3 1.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) HemY_N PF07219.13 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 0.22 11.7 9.0 0.23 11.7 8.4 1.4 1 1 0 1 1 1 0 HemY protein N-terminus DUF2207 PF09972.9 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 0.98 8.1 2.6 0.8 8.4 2.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Babuvirus_MP PF07234.11 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 4.7 7.4 8.2 5.2 7.3 8.2 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein Phage_holin_3_6 PF07332.11 NODE_68991_length_229_cov_37.752577_g61050_i0forward_frame_1 - 7.4 6.7 9.1 9.6 6.3 9.1 1.3 1 1 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Bac_DNA_binding PF00216.21 NODE_68988_length_229_cov_39.701031_g61047_i0forward_frame_1 - 0.0038 17.4 0.3 0.0049 17.0 0.3 1.2 1 0 0 1 1 1 1 Bacterial DNA-binding protein DUF1002 PF06207.11 NODE_68988_length_229_cov_39.701031_g61047_i0forward_frame_1 - 0.006 16.1 1.5 0.0065 16.0 1.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1002) FeoB_C PF07664.12 NODE_68987_length_229_cov_39.948454_g61046_i0reverse_frame_1 - 0.044 13.5 0.3 0.095 12.4 0.0 1.7 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus HrcA_DNA-bdg PF03444.15 NODE_68984_length_229_cov_43.273196_g61043_i0forward_frame_1 - 0.1 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding zf-UBP_var PF17807.1 NODE_68976_length_229_cov_50.505155_g61035_i0forward_frame_1 - 0.0047 16.7 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 Variant UBP zinc finger PCMT PF01135.19 NODE_68974_length_229_cov_51.149485_g61033_i0reverse_frame_1 - 0.06 13.1 0.0 0.067 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) zf-rbx1 PF12678.7 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 6.2e-09 36.0 0.8 1.2e-08 35.1 0.8 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 1.4e-07 31.7 2.0 2.1e-07 31.1 2.0 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 2.9e-05 23.8 0.5 4.2e-05 23.3 0.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 9.2e-05 22.2 0.9 0.00015 21.6 0.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.00018 21.4 0.7 0.00026 20.9 0.7 1.2 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.00035 20.4 0.2 0.0005 19.9 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.00056 19.7 0.2 0.00076 19.3 0.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.00073 19.5 0.8 0.00073 19.5 0.8 1.7 1 1 1 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.0008 19.4 0.2 0.0012 18.8 0.2 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.0032 17.6 0.8 0.0054 16.8 0.8 1.3 1 0 0 1 1 1 1 RING-variant domain Zn_ribbon_17 PF17120.5 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.022 14.4 1.5 0.046 13.4 1.5 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zinc_ribbon_9 PF14369.6 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.039 14.2 0.1 0.055 13.7 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon zf-RING_11 PF17123.5 NODE_68971_length_229_cov_54.113402_g61030_i0reverse_frame_1 - 0.18 11.6 4.9 0.37 10.6 1.5 2.4 2 0 0 2 2 2 0 RING-like zinc finger DuoxA PF10204.9 NODE_68970_length_229_cov_54.283505_g61029_i0forward_frame_1 - 0.15 11.0 1.1 0.17 10.9 1.1 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor Neural_ProG_Cyt PF06567.11 NODE_68962_length_229_cov_65.376289_g61021_i0forward_frame_1 - 0.12 12.6 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Neural chondroitin sulphate proteoglycan cytoplasmic domain Y_phosphatase PF00102.27 NODE_68959_length_229_cov_77.329897_g61018_i0reverse_frame_1 - 6.5e-10 39.0 0.3 7.9e-10 38.7 0.3 1.0 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DUF3006 PF11213.8 NODE_68959_length_229_cov_77.329897_g61018_i0reverse_frame_1 - 0.14 12.4 0.1 0.27 11.5 0.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3006) DUF4118 PF13493.6 NODE_68956_length_229_cov_82.319588_g61015_i0forward_frame_1 - 0.078 12.8 1.2 0.091 12.6 1.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) DUF2631 PF10939.8 NODE_68953_length_229_cov_92.778351_g61012_i0forward_frame_1 - 0.017 14.9 0.7 0.027 14.3 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2631) DUF4641 PF15483.6 NODE_68952_length_229_cov_94.345361_g61011_i0forward_frame_1 - 0.0059 15.8 0.3 0.0066 15.6 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4641) Cnd1_N PF12922.7 NODE_68940_length_229_cov_169.051546_g60999_i0forward_frame_1 - 0.0082 16.0 0.1 0.0084 16.0 0.1 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1, N-term DUF4012 PF13196.6 NODE_68932_length_229_cov_240.824742_g60991_i0reverse_frame_1 - 0.023 15.2 0.0 0.029 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4012) DUF1478 PF07349.11 NODE_68926_length_229_cov_374.005155_g60985_i0reverse_frame_1 - 0.027 14.4 0.1 0.03 14.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1478) DUF1415 PF07209.12 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_1 - 0.0026 17.5 3.8 0.39 10.5 0.3 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1415) Ribonuc_red_2_N PF08471.10 NODE_68917_length_230_cov_0.820513_g60976_i0forward_frame_1 - 0.16 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Class II vitamin B12-dependent ribonucleotide reductase FAM194 PF14977.6 NODE_68915_length_230_cov_0.820513_g60974_i0reverse_frame_1 - 0.053 12.8 0.2 0.056 12.7 0.2 1.1 1 0 0 1 1 1 0 FAM194 protein Atg14 PF10186.9 NODE_68911_length_230_cov_0.938462_g60970_i0reverse_frame_1 - 7.9 5.5 6.0 11 5.0 6.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 EST1 PF10374.9 NODE_68907_length_230_cov_1.025641_g60966_i0reverse_frame_1 - 0.014 16.0 0.4 0.016 15.8 0.4 1.1 1 0 0 1 1 1 0 Telomerase activating protein Est1 SPC12 PF06645.13 NODE_68907_length_230_cov_1.025641_g60966_i0reverse_frame_1 - 0.046 13.8 0.8 0.058 13.5 0.8 1.2 1 0 0 1 1 1 0 Microsomal signal peptidase 12 kDa subunit (SPC12) SET_assoc PF11767.8 NODE_68907_length_230_cov_1.025641_g60966_i0forward_frame_1 - 0.034 13.8 0.3 0.049 13.3 0.3 1.4 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated PHM7_cyt PF14703.6 NODE_68907_length_230_cov_1.025641_g60966_i0forward_frame_1 - 0.042 14.1 0.0 0.057 13.7 0.0 1.2 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Ntox50 PF15542.6 NODE_68907_length_230_cov_1.025641_g60966_i0forward_frame_1 - 0.096 13.5 0.2 0.11 13.3 0.2 1.1 1 0 0 1 1 1 0 Bacterial toxin 50 TPR_2 PF07719.17 NODE_68905_length_230_cov_1.025641_g60964_i0forward_frame_1 - 0.013 15.5 0.0 0.024 14.7 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_68905_length_230_cov_1.025641_g60964_i0forward_frame_1 - 0.02 15.7 0.0 0.029 15.2 0.0 1.4 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_68905_length_230_cov_1.025641_g60964_i0forward_frame_1 - 0.059 13.2 0.3 0.11 12.3 0.1 1.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_68905_length_230_cov_1.025641_g60964_i0forward_frame_1 - 0.098 12.9 0.2 0.48 10.8 0.1 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TP2 PF01254.18 NODE_68898_length_230_cov_1.097436_g60957_i0reverse_frame_1 - 0.63 10.7 14.6 0.8 10.3 14.6 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 YMF19 PF02326.15 NODE_68893_length_230_cov_1.153846_g60952_i0forward_frame_1 - 0.096 13.5 2.0 0.11 13.3 2.0 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 ATP-synt_8 PF00895.20 NODE_68893_length_230_cov_1.153846_g60952_i0forward_frame_1 - 0.48 10.9 2.8 0.89 10.1 2.8 1.4 1 0 0 1 1 1 0 ATP synthase protein 8 PET10 PF17316.2 NODE_68892_length_230_cov_1.169231_g60951_i0forward_frame_1 - 0.034 13.7 0.2 0.038 13.5 0.2 1.0 1 0 0 1 1 1 0 Petite colonies protein 10 Coatamer_beta_C PF07718.12 NODE_68891_length_230_cov_1.169231_g60950_i0forward_frame_1 - 0.018 14.9 0.1 0.026 14.4 0.1 1.3 1 0 0 1 1 1 0 Coatomer beta C-terminal region NDK PF00334.19 NODE_68889_length_230_cov_1.189744_g60948_i0forward_frame_1 - 4.2e-27 94.8 0.1 4.5e-27 94.7 0.1 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L34 PF00468.17 NODE_68867_length_230_cov_1.343590_g60926_i0forward_frame_1 - 0.0039 17.1 0.1 0.0055 16.6 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L34 NBP1 PF08537.10 NODE_68862_length_230_cov_1.364103_g60921_i0reverse_frame_1 - 0.031 13.7 2.5 0.035 13.5 2.5 1.3 1 1 0 1 1 1 0 Fungal Nap binding protein NBP1 Spc7 PF08317.11 NODE_68858_length_230_cov_1.405128_g60917_i0reverse_frame_1 - 0.06 12.2 0.3 0.06 12.2 0.3 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein MbeD_MobD PF04899.12 NODE_68858_length_230_cov_1.405128_g60917_i0reverse_frame_1 - 0.12 12.5 2.4 0.43 10.7 2.4 1.9 1 1 0 1 1 1 0 MbeD/MobD like DUF2206 PF09971.9 NODE_68854_length_230_cov_1.435897_g60913_i0reverse_frame_1 - 0.29 9.8 6.9 0.32 9.7 6.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) Ecm29 PF13001.7 NODE_68854_length_230_cov_1.435897_g60913_i0forward_frame_1 - 0.029 13.1 1.0 0.032 12.9 1.0 1.0 1 0 0 1 1 1 0 Proteasome stabiliser DHHC PF01529.20 NODE_68853_length_230_cov_1.466667_g60912_i0reverse_frame_1 - 9.5e-15 54.9 13.3 1.2e-14 54.5 13.3 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase Med13_C PF06333.12 NODE_68852_length_230_cov_1.482051_g60911_i0reverse_frame_1 - 0.018 14.3 1.2 0.02 14.2 1.2 1.0 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain TEX33 PF15400.6 NODE_68852_length_230_cov_1.482051_g60911_i0forward_frame_1 - 0.1 13.1 0.3 0.11 13.0 0.3 1.1 1 0 0 1 1 1 0 Testis-expressed sequence 33 protein family SAP PF02037.27 NODE_68849_length_230_cov_1.497436_g60908_i0reverse_frame_1 - 0.083 12.7 0.3 0.12 12.1 0.3 1.3 1 0 0 1 1 1 0 SAP domain DUF5318 PF17249.2 NODE_68845_length_230_cov_1.548718_g60904_i0reverse_frame_1 - 0.085 12.6 0.1 0.098 12.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5318) DUF5110 PF17137.4 NODE_68837_length_230_cov_1.635897_g60896_i0reverse_frame_1 - 1.7e-07 31.4 0.9 2.3e-07 31.0 0.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Vac14_Fab1_bd PF12755.7 NODE_68835_length_230_cov_1.641026_g60894_i0forward_frame_1 - 0.01 16.4 0.1 0.024 15.2 0.1 1.7 1 1 0 1 1 1 0 Vacuolar 14 Fab1-binding region HEAT PF02985.22 NODE_68835_length_230_cov_1.641026_g60894_i0forward_frame_1 - 0.05 13.9 0.0 3.1 8.3 0.0 2.7 3 1 1 4 4 4 0 HEAT repeat DUF2774 PF11242.8 NODE_68835_length_230_cov_1.641026_g60894_i0forward_frame_1 - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) DUF1653 PF07866.11 NODE_68825_length_230_cov_1.728205_g60884_i0forward_frame_1 - 0.013 15.8 0.1 0.014 15.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1653) PX PF00787.24 NODE_68821_length_230_cov_1.743590_g60880_i0reverse_frame_1 - 4.4e-14 52.4 3.0 4.4e-14 52.4 3.0 1.0 1 0 0 1 1 1 1 PX domain PBP_sp32 PF07222.12 NODE_68821_length_230_cov_1.743590_g60880_i0forward_frame_1 - 0.15 11.5 2.4 0.16 11.4 2.4 1.0 1 0 0 1 1 1 0 Proacrosin binding protein sp32 BDV_M PF16520.5 NODE_68818_length_230_cov_1.758974_g60877_i0reverse_frame_1 - 0.071 13.5 0.0 0.08 13.3 0.0 1.2 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae SUKH-3 PF14433.6 NODE_68817_length_230_cov_1.758974_g60876_i0reverse_frame_1 - 0.091 13.2 0.1 0.092 13.2 0.1 1.1 1 0 0 1 1 1 0 SUKH-3 immunity protein DUF5408 PF17402.2 NODE_68812_length_230_cov_1.794872_g60871_i0reverse_frame_1 - 0.17 11.8 4.0 0.1 12.5 2.1 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5408) DUF1409 PF07197.12 NODE_68802_length_230_cov_1.938462_g60861_i0reverse_frame_1 - 0.15 11.9 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1409) Aminotran_1_2 PF00155.21 NODE_68793_length_230_cov_2.020513_g60852_i0forward_frame_1 - 4.4e-08 32.7 0.0 4.4e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PGM1_C PF18105.1 NODE_68793_length_230_cov_2.020513_g60852_i0forward_frame_1 - 0.025 14.1 0.0 0.032 13.7 0.0 1.3 1 1 0 1 1 1 0 PGM1 C-terminal domain RuBisCO_small PF00101.20 NODE_68790_length_230_cov_2.046154_g60849_i0reverse_frame_1 - 0.084 12.9 0.0 0.092 12.7 0.0 1.1 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain APC_u5 PF16630.5 NODE_68790_length_230_cov_2.046154_g60849_i0forward_frame_1 - 0.014 16.5 0.0 0.016 16.2 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on APC between 1st and 2nd catenin-bdg motifs ArgJ PF01960.18 NODE_68789_length_230_cov_2.051282_g60848_i0reverse_frame_1 - 6.6e-11 41.6 0.0 7e-11 41.5 0.0 1.0 1 0 0 1 1 1 1 ArgJ family SMC_hinge PF06470.13 NODE_68789_length_230_cov_2.051282_g60848_i0forward_frame_1 - 0.064 13.6 0.0 0.069 13.4 0.0 1.1 1 0 0 1 1 1 0 SMC proteins Flexible Hinge Domain Harakiri PF15196.6 NODE_68782_length_230_cov_2.215385_g60841_i0reverse_frame_1 - 0.014 15.9 0.9 0.016 15.6 0.9 1.1 1 0 0 1 1 1 0 Activator of apoptosis harakiri Abhydrolase_3 PF07859.13 NODE_68781_length_230_cov_2.220513_g60840_i0reverse_frame_1 - 7.1e-05 22.8 0.1 9.5e-05 22.4 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Zf_RING PF16744.5 NODE_68774_length_230_cov_2.348718_g60833_i0reverse_frame_1 - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 KIAA1045 RING finger # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks347.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks347.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks347.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks347.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:21:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- WD40 PF00400.32 NODE_68767_length_230_cov_2.487179_g60826_i0forward_frame_1 - 0.0017 19.1 0.0 0.005 17.7 0.0 1.7 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_68767_length_230_cov_2.487179_g60826_i0forward_frame_1 - 0.029 14.7 0.0 0.035 14.4 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 NODE_68767_length_230_cov_2.487179_g60826_i0forward_frame_1 - 0.14 11.1 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein C1_2 PF03107.16 NODE_68765_length_230_cov_2.569231_g60824_i0forward_frame_1 - 0.00089 19.5 1.3 0.0013 19.0 1.3 1.4 1 0 0 1 1 1 1 C1 domain MORN PF02493.20 NODE_68758_length_230_cov_2.733333_g60817_i0forward_frame_1 - 8.2e-13 47.4 12.2 3.3e-07 29.8 1.3 3.5 4 0 0 4 4 4 3 MORN repeat DHBP_synthase PF00926.19 NODE_68755_length_230_cov_2.820513_g60814_i0forward_frame_1 - 4e-30 104.8 0.1 4.2e-30 104.7 0.1 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase USP7_ICP0_bdg PF12436.8 NODE_68753_length_230_cov_2.830769_g60812_i0reverse_frame_1 - 0.087 12.1 0.0 0.16 11.2 0.0 1.4 1 1 0 1 1 1 0 ICP0-binding domain of Ubiquitin-specific protease 7 DUF4901 PF16244.5 NODE_68750_length_230_cov_3.041026_g60809_i0forward_frame_1 - 0.1 11.9 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4901) Toxin_32 PF08120.11 NODE_68749_length_230_cov_3.169231_g60808_i0forward_frame_1 - 0.052 13.4 0.8 0.095 12.5 0.8 1.5 1 0 0 1 1 1 0 Tamulustoxin family Albumin_I_a PF16720.5 NODE_68740_length_230_cov_4.615385_g60799_i0forward_frame_1 - 0.21 11.5 3.5 0.16 11.9 2.4 1.5 1 1 0 1 1 1 0 Albumin I chain a OAD_gamma PF04277.13 NODE_68734_length_230_cov_21.712821_g60793_i0forward_frame_1 - 0.39 11.3 5.6 0.58 10.8 5.6 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF3739 PF12545.8 NODE_68733_length_230_cov_26.994872_g60792_i0reverse_frame_1 - 0.1 13.1 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 Filamentous haemagglutinin family outer membrane protein YMF19 PF02326.15 NODE_68730_length_230_cov_31.928205_g60789_i0forward_frame_1 - 1.3 9.9 13.3 1.4 9.7 13.3 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 Sugar_transport PF06800.12 NODE_68727_length_230_cov_36.107692_g60786_i0reverse_frame_1 - 0.045 13.1 0.0 0.046 13.1 0.0 1.1 1 0 0 1 1 1 0 Sugar transport protein MTCP1 PF08991.10 NODE_68726_length_230_cov_37.512821_g60785_i0forward_frame_1 - 0.032 14.5 0.6 0.043 14.1 0.6 1.1 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type HIM1 PF08732.10 NODE_68725_length_230_cov_39.246154_g60784_i0forward_frame_1 - 0.043 13.3 0.3 0.055 13.0 0.3 1.1 1 0 0 1 1 1 0 HIM1 Proteasome_A_N PF10584.9 NODE_68724_length_230_cov_43.482051_g60783_i0forward_frame_1 - 0.28 10.9 1.2 0.54 10.0 0.0 2.0 2 0 0 2 2 2 0 Proteasome subunit A N-terminal signature CI-B14_5a PF07347.12 NODE_68722_length_230_cov_45.394872_g60781_i0reverse_frame_1 - 0.025 14.4 0.1 0.036 13.9 0.1 1.3 1 1 0 1 1 1 0 NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) DUF3719 PF12516.8 NODE_68720_length_230_cov_48.892308_g60779_i0forward_frame_1 - 0.0006 19.5 0.6 0.00078 19.1 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3719) AP2 PF00847.20 NODE_68720_length_230_cov_48.892308_g60779_i0forward_frame_1 - 0.12 12.6 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 AP2 domain Auxin_repressed PF05564.12 NODE_68718_length_230_cov_50.220513_g60777_i0forward_frame_1 - 0.022 15.4 0.9 0.024 15.3 0.9 1.1 1 0 0 1 1 1 0 Dormancy/auxin associated protein DUF3510 PF12022.8 NODE_68713_length_230_cov_57.138462_g60772_i0reverse_frame_1 - 0.13 12.7 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3510) Sarcolipin PF05366.11 NODE_68706_length_230_cov_62.605128_g60765_i0reverse_frame_1 - 0.13 12.0 1.0 0.18 11.5 1.0 1.2 1 0 0 1 1 1 0 Sarcolipin Pkinase PF00069.25 NODE_68705_length_230_cov_63.000000_g60764_i0reverse_frame_1 - 4.8e-10 39.2 1.3 4.9e-10 39.2 1.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_68705_length_230_cov_63.000000_g60764_i0reverse_frame_1 - 7.9e-08 31.9 0.6 7.9e-08 31.9 0.6 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase SCAN PF02023.17 NODE_68704_length_230_cov_63.933333_g60763_i0reverse_frame_1 - 0.0027 17.5 0.5 0.0029 17.4 0.5 1.0 1 0 0 1 1 1 1 SCAN domain NPV_P10 PF05531.12 NODE_68703_length_230_cov_64.600000_g60762_i0reverse_frame_1 - 0.01 16.2 0.0 0.013 15.9 0.0 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein UPF0051 PF01458.17 NODE_68700_length_230_cov_70.492308_g60759_i0forward_frame_1 - 0.0084 15.8 0.1 0.0093 15.7 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Gram_pos_anchor PF00746.21 NODE_68695_length_230_cov_76.246154_g60754_i0forward_frame_1 - 3 7.9 9.3 0.43 10.5 4.1 2.1 2 0 0 2 2 2 0 LPXTG cell wall anchor motif DUF1936 PF09151.10 NODE_68694_length_230_cov_77.153846_g60753_i0reverse_frame_1 - 2 8.4 6.1 17 5.5 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) S-AdoMet_synt_N PF00438.20 NODE_68692_length_230_cov_78.558974_g60751_i0reverse_frame_1 - 4.2e-29 101.1 0.2 4.8e-29 100.9 0.2 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 NODE_68692_length_230_cov_78.558974_g60751_i0reverse_frame_1 - 0.0046 15.8 0.0 0.0046 15.8 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) Sigma70_ECF PF07638.11 NODE_68688_length_230_cov_89.317949_g60747_i0reverse_frame_1 - 0.044 13.7 2.5 0.053 13.4 2.5 1.1 1 0 0 1 1 1 0 ECF sigma factor DUF3847 PF12958.7 NODE_68674_length_230_cov_134.184615_g60733_i0forward_frame_1 - 0.034 14.3 0.0 0.041 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3847) TSR PF18487.1 NODE_68673_length_230_cov_134.830769_g60732_i0forward_frame_1 - 0.02 15.1 0.8 3.5 7.9 0.1 2.3 2 0 0 2 2 2 0 Thrombospondin type 1 repeat Erg28 PF03694.13 NODE_68667_length_230_cov_422.769231_g60726_i0reverse_frame_1 - 0.021 15.2 1.1 0.024 15.0 1.1 1.1 1 0 0 1 1 1 0 Erg28 like protein Pex2_Pex12 PF04757.14 NODE_68666_length_230_cov_535.456410_g60725_i0reverse_frame_1 - 4.9 6.7 9.3 3.1 7.3 1.2 2.0 1 1 1 2 2 2 0 Pex2 / Pex12 amino terminal region DUF1415 PF07209.12 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_1 - 0.0033 17.2 3.7 0.37 10.5 0.3 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1415) DUF3307 PF11750.8 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_1 - 0.076 13.1 0.1 6 7.0 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3307) SH3_16 PF18348.1 NODE_68661_length_230_cov_1230.820513_g60720_i0reverse_frame_1 - 0.14 11.9 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial dipeptidyl-peptidase Sh3 domain S-AdoMet_synt_M PF02772.16 NODE_68661_length_230_cov_1230.820513_g60720_i0forward_frame_1 - 7.7e-06 26.2 0.1 9.6e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain AAA_lid_3 PF17862.1 NODE_68661_length_230_cov_1230.820513_g60720_i0forward_frame_1 - 0.15 11.9 0.3 0.36 10.7 0.0 1.7 2 0 0 2 2 2 0 AAA+ lid domain S-AdoMet_synt_M PF02772.16 NODE_68659_length_230_cov_5646.887179_g60718_i0reverse_frame_1 - 7.7e-06 26.2 0.1 9.6e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain AAA_lid_3 PF17862.1 NODE_68659_length_230_cov_5646.887179_g60718_i0reverse_frame_1 - 0.15 11.9 0.3 0.36 10.7 0.0 1.7 2 0 0 2 2 2 0 AAA+ lid domain DUF1648 PF07853.11 NODE_68651_length_231_cov_0.913265_g60710_i0reverse_frame_1 - 0.11 12.2 0.1 0.17 11.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1648) Toxin_TOLIP PF00087.21 NODE_68649_length_231_cov_0.933673_g60708_i0reverse_frame_1 - 0.011 16.0 1.8 0.013 15.7 1.8 1.2 1 0 0 1 1 1 0 Snake toxin and toxin-like protein DUF2229 PF09989.9 NODE_68648_length_231_cov_0.959184_g60707_i0reverse_frame_1 - 0.083 12.5 0.0 2.6 7.7 0.0 2.0 1 1 1 2 2 2 0 CoA enzyme activase uncharacterised domain (DUF2229) TT_ORF1 PF02956.14 NODE_68645_length_231_cov_1.020408_g60704_i0reverse_frame_1 - 1.3 7.6 5.5 1.3 7.6 5.5 1.0 1 0 0 1 1 1 0 TT viral orf 1 SR-25 PF10500.9 NODE_68645_length_231_cov_1.020408_g60704_i0forward_frame_1 - 0.096 12.3 2.1 0.095 12.3 2.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein NMU PF02070.15 NODE_68640_length_231_cov_1.071429_g60699_i0forward_frame_1 - 0.1 12.5 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Neuromedin U DUF747 PF05346.11 NODE_68635_length_231_cov_1.183673_g60694_i0reverse_frame_1 - 0.025 14.1 0.3 0.025 14.0 0.3 1.1 1 0 0 1 1 1 0 Eukaryotic membrane protein family DUF1967 PF09269.11 NODE_68631_length_231_cov_1.204082_g60690_i0forward_frame_1 - 0.1 12.5 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) PAC4 PF16093.5 NODE_68630_length_231_cov_1.209184_g60689_i0reverse_frame_1 - 0.13 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 YacG PF03884.14 NODE_68610_length_231_cov_1.311224_g60669_i0reverse_frame_1 - 0.087 12.6 0.4 0.13 12.0 0.4 1.3 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG SHQ1 PF04925.15 NODE_68606_length_231_cov_1.336735_g60665_i0reverse_frame_1 - 0.019 14.5 0.4 0.022 14.3 0.4 1.0 1 0 0 1 1 1 0 SHQ1 protein Tom7 PF08038.12 NODE_68604_length_231_cov_1.341837_g60663_i0reverse_frame_1 - 0.13 11.9 0.0 0.26 11.0 0.0 1.5 1 0 0 1 1 1 0 TOM7 family DUF2706 PF10913.8 NODE_68594_length_231_cov_1.464286_g60653_i0forward_frame_1 - 0.24 11.3 0.2 0.24 11.3 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2706) Ni_hydr_CYTB PF01292.20 NODE_68591_length_231_cov_1.474490_g60650_i0reverse_frame_1 - 0.16 11.6 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 zf-CCHC_2 PF13696.6 NODE_68587_length_231_cov_1.551020_g60646_i0forward_frame_1 - 0.074 12.9 2.6 0.16 11.9 2.6 1.6 1 0 0 1 1 1 0 Zinc knuckle Saf_2TM PF18303.1 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.0058 16.2 0.9 0.006 16.2 0.9 1.0 1 0 0 1 1 1 1 SAVED-fused 2TM effector domain DuoxA PF10204.9 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.023 13.7 0.4 0.023 13.7 0.4 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor MFS_4 PF06779.14 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.027 13.8 0.4 0.03 13.6 0.4 1.0 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB DUF2721 PF11026.8 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.044 13.7 2.1 0.053 13.4 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Cellulose_synt PF03552.14 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.063 11.8 0.7 0.067 11.7 0.7 1.0 1 0 0 1 1 1 0 Cellulose synthase Anoctamin PF04547.12 NODE_68586_length_231_cov_1.561224_g60645_i0forward_frame_1 - 0.073 11.9 0.4 0.076 11.8 0.4 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel PRA1 PF03208.19 NODE_68585_length_231_cov_1.571429_g60644_i0reverse_frame_1 - 0.065 12.9 0.0 0.075 12.7 0.0 1.1 1 0 0 1 1 1 0 PRA1 family protein Ribosomal_L10 PF00466.20 NODE_68584_length_231_cov_1.581633_g60643_i0reverse_frame_1 - 9e-05 22.5 0.1 0.00013 22.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L10 V-ATPase_H_N PF03224.14 NODE_68582_length_231_cov_1.591837_g60641_i0reverse_frame_1 - 0.1 11.8 1.1 0.1 11.9 1.1 1.1 1 0 0 1 1 1 0 V-ATPase subunit H TonB_dep_Rec PF00593.24 NODE_68568_length_231_cov_1.688776_g60627_i0forward_frame_1 - 0.0056 16.6 0.9 0.0058 16.6 0.9 1.0 1 0 0 1 1 1 1 TonB dependent receptor PBP_sp32 PF07222.12 NODE_68552_length_231_cov_1.913265_g60611_i0forward_frame_1 - 1.6 8.2 6.9 1.8 8.0 6.9 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 DUF1376 PF07120.11 NODE_68550_length_231_cov_1.933673_g60609_i0reverse_frame_1 - 0.13 12.6 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1376) DDE_Tnp_IS1595 PF12762.7 NODE_68549_length_231_cov_1.933673_g60608_i0reverse_frame_1 - 0.0055 16.7 0.0 0.0063 16.5 0.0 1.1 1 0 0 1 1 1 1 ISXO2-like transposase domain AgrB PF04647.15 NODE_68546_length_231_cov_1.969388_g60605_i0reverse_frame_1 - 0.046 13.0 1.2 0.049 12.9 1.2 1.1 1 0 0 1 1 1 0 Accessory gene regulator B Ribonuc_P_40 PF08584.11 NODE_68538_length_231_cov_2.045918_g60597_i0reverse_frame_1 - 0.13 11.5 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease P 40kDa (Rpp40) subunit MarC PF01914.17 NODE_68535_length_231_cov_2.112245_g60594_i0forward_frame_1 - 3.6e-27 95.1 4.7 3.9e-27 95.0 4.7 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein PAS_5 PF07310.13 NODE_68530_length_231_cov_2.132653_g60589_i0forward_frame_1 - 0.37 10.6 1.3 15 5.4 0.2 2.1 1 1 1 2 2 2 0 PAS domain DUF2960 PF11173.8 NODE_68530_length_231_cov_2.132653_g60589_i0forward_frame_1 - 1.4 9.4 2.9 6 7.4 0.1 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF2960) Desulfoferrod_N PF06397.12 NODE_68521_length_231_cov_2.229592_g60580_i0reverse_frame_1 - 0.16 11.6 0.5 0.25 11.0 0.5 1.3 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain AA_permease_2 PF13520.6 NODE_68521_length_231_cov_2.229592_g60580_i0forward_frame_1 - 0.29 9.9 7.2 0.31 9.8 7.2 1.0 1 0 0 1 1 1 0 Amino acid permease ABC2_membrane_3 PF12698.7 NODE_68521_length_231_cov_2.229592_g60580_i0forward_frame_1 - 0.33 10.0 5.4 0.41 9.7 5.4 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein Conotoxin PF02950.17 NODE_68518_length_231_cov_2.270408_g60577_i0reverse_frame_1 - 0.43 11.6 8.8 0.56 11.3 8.8 1.3 1 0 0 1 1 1 0 Conotoxin TGS PF02824.21 NODE_68516_length_231_cov_2.275510_g60575_i0forward_frame_1 - 5e-11 42.5 0.0 6.2e-11 42.2 0.0 1.1 1 0 0 1 1 1 1 TGS domain DUF4131 PF13567.6 NODE_68513_length_231_cov_2.326531_g60572_i0reverse_frame_1 - 4.8 6.8 6.3 6.9 6.3 6.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Pkinase PF00069.25 NODE_68512_length_231_cov_2.357143_g60571_i0forward_frame_1 - 0.05 13.0 0.1 0.053 12.9 0.1 1.0 1 0 0 1 1 1 0 Protein kinase domain DUF1661 PF07877.11 NODE_68502_length_231_cov_2.505102_g60561_i0reverse_frame_1 - 0.31 10.8 1.5 0.62 9.8 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1661) DUF2871 PF11070.8 NODE_68496_length_231_cov_2.653061_g60555_i0reverse_frame_1 - 0.051 13.9 0.2 0.058 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2871) Antimicrobial24 PF16049.5 NODE_68492_length_231_cov_2.857143_g60551_i0reverse_frame_1 - 0.067 13.2 0.4 0.11 12.5 0.4 1.3 1 0 0 1 1 1 0 Frog antimicrobial peptide Cas9_b_hairpin PF17893.1 NODE_68491_length_231_cov_2.867347_g60550_i0forward_frame_1 - 0.11 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated endonuclease Cas9 beta-hairpin domain FAST_1 PF06743.15 NODE_68490_length_231_cov_2.918367_g60549_i0forward_frame_1 - 0.081 12.9 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 1 zf_CCCH_5 PF18384.1 NODE_68488_length_231_cov_3.000000_g60547_i0forward_frame_1 - 0.02 15.0 4.2 2.4 8.3 1.6 2.3 2 0 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) DUF3973 PF13119.6 NODE_68488_length_231_cov_3.000000_g60547_i0forward_frame_1 - 0.17 12.0 0.3 0.17 12.0 0.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3973) Rad50_zn_hook PF04423.14 NODE_68486_length_231_cov_3.051020_g60545_i0reverse_frame_1 - 0.048 13.5 0.2 0.069 13.0 0.2 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif RecR PF02132.15 NODE_68486_length_231_cov_3.051020_g60545_i0reverse_frame_1 - 0.13 11.9 0.1 0.17 11.5 0.1 1.2 1 0 0 1 1 1 0 RecR protein HTH_IclR PF09339.10 NODE_68476_length_231_cov_4.423469_g60535_i0reverse_frame_1 - 5.2e-05 23.0 0.0 8.3e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain Sde2_N_Ubi PF13019.6 NODE_68476_length_231_cov_4.423469_g60535_i0forward_frame_1 - 0.053 13.4 0.2 0.058 13.2 0.2 1.1 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain DUF834 PF05754.14 NODE_68476_length_231_cov_4.423469_g60535_i0forward_frame_1 - 0.13 12.4 0.2 0.17 11.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF834) DUF1231 PF06802.11 NODE_68473_length_231_cov_6.596939_g60532_i0reverse_frame_1 - 0.29 10.2 10.3 0.084 12.0 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1231) DUF373 PF04123.13 NODE_68473_length_231_cov_6.596939_g60532_i0reverse_frame_1 - 2.7 7.3 5.1 2.9 7.3 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) GPI2 PF06432.11 NODE_68473_length_231_cov_6.596939_g60532_i0forward_frame_1 - 4.2 6.7 9.3 4.4 6.7 9.3 1.1 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase Glyco_hydro_42 PF02449.15 NODE_68464_length_231_cov_36.576531_g60523_i0forward_frame_1 - 0.061 12.6 0.0 0.068 12.5 0.0 1.0 1 0 0 1 1 1 0 Beta-galactosidase AhpC-TSA_2 PF13911.6 NODE_68462_length_231_cov_38.438776_g60521_i0reverse_frame_1 - 0.085 13.0 0.0 0.091 12.9 0.0 1.1 1 0 0 1 1 1 0 AhpC/TSA antioxidant enzyme zf-C4H2 PF10146.9 NODE_68439_length_231_cov_61.341837_g60498_i0forward_frame_1 - 0.0069 16.7 6.5 0.0074 16.6 6.5 1.0 1 0 0 1 1 1 1 Zinc finger-containing protein Histone_H2A_C PF16211.5 NODE_68435_length_231_cov_66.979592_g60494_i0reverse_frame_1 - 2.5 7.9 5.3 4.6 7.1 5.3 1.4 1 0 0 1 1 1 0 C-terminus of histone H2A MKT1_C PF12246.8 NODE_68435_length_231_cov_66.979592_g60494_i0forward_frame_1 - 0.041 13.1 0.0 0.041 13.1 0.0 1.0 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication DUF3301 PF11743.8 NODE_68435_length_231_cov_66.979592_g60494_i0forward_frame_1 - 0.097 12.4 0.5 0.15 11.7 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) FYVE PF01363.21 NODE_68435_length_231_cov_66.979592_g60494_i0forward_frame_1 - 0.48 10.6 10.3 0.15 12.3 7.5 1.5 1 1 0 1 1 1 0 FYVE zinc finger DUF3902 PF13042.6 NODE_68420_length_231_cov_137.469388_g60479_i0reverse_frame_1 - 0.01 15.4 0.6 0.013 15.1 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3902) RisS_PPD PF16524.5 NODE_68418_length_231_cov_196.857143_g60477_i0reverse_frame_1 - 0.11 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Periplasmic domain of Sensor histidine kinase RisS Pkinase PF00069.25 NODE_68418_length_231_cov_196.857143_g60477_i0forward_frame_1 - 2.4e-11 43.5 0.0 2.5e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_68418_length_231_cov_196.857143_g60477_i0forward_frame_1 - 0.00011 21.6 0.0 0.00011 21.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase PIF1 PF05970.14 NODE_68418_length_231_cov_196.857143_g60477_i0forward_frame_1 - 0.11 11.6 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 PIF1-like helicase DUF2663 PF10864.8 NODE_68411_length_231_cov_707.571429_g60470_i0reverse_frame_1 - 0.0076 16.7 2.2 0.0082 16.5 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2663) Defb50 PF17546.2 NODE_68409_length_231_cov_884.122449_g60468_i0forward_frame_1 - 0.14 12.1 1.6 8.2 6.4 0.3 2.1 1 1 1 2 2 2 0 Beta defensin 50 Selenoprotein_S PF06936.11 NODE_68407_length_232_cov_0.796954_g60466_i0forward_frame_2 - 0.13 12.1 0.5 0.18 11.6 0.5 1.1 1 0 0 1 1 1 0 Selenoprotein S (SelS) Herpes_HEPA PF03324.14 NODE_68404_length_232_cov_0.812183_g60463_i0reverse_frame_2 - 0.088 13.3 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus DNA helicase/primase complex associated protein Mon2_C PF16206.5 NODE_68404_length_232_cov_0.812183_g60463_i0forward_frame_2 - 0.061 11.5 0.1 0.07 11.3 0.1 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein Cation_efflux PF01545.21 NODE_68403_length_232_cov_0.812183_g60462_i0forward_frame_2 - 1.7e-14 54.0 0.2 1.9e-14 53.9 0.2 1.0 1 0 0 1 1 1 1 Cation efflux family Secretin_N_2 PF07655.13 NODE_68398_length_232_cov_0.923858_g60457_i0reverse_frame_2 - 0.13 12.9 9.5 0.14 12.7 9.5 1.1 1 0 0 1 1 1 0 Secretin N-terminal domain KASH PF10541.9 NODE_68397_length_232_cov_0.928934_g60456_i0forward_frame_2 - 3.6 7.9 10.3 0.93 9.8 7.0 1.7 1 1 1 2 2 2 0 Nuclear envelope localisation domain KCH PF16944.5 NODE_68393_length_232_cov_0.989848_g60452_i0forward_frame_3 - 0.0081 16.0 3.3 0.009 15.8 3.3 1.0 1 0 0 1 1 1 1 Fungal potassium channel Mito_carr PF00153.27 NODE_68391_length_232_cov_1.015228_g60450_i0forward_frame_3 - 1.3e-15 57.0 0.0 1.5e-15 56.9 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF5621 PF18532.1 NODE_68387_length_232_cov_1.106599_g60446_i0reverse_frame_3 - 0.023 14.6 0.1 0.026 14.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5621) DUF1980 PF09323.10 NODE_68384_length_232_cov_1.131980_g60443_i0forward_frame_2 - 0.046 13.6 1.5 0.054 13.4 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) EGF PF00008.27 NODE_68382_length_232_cov_1.152284_g60441_i0forward_frame_3 - 0.21 12.0 6.5 4.7 7.6 1.6 2.7 2 1 1 3 3 3 0 EGF-like domain Fer4_20 PF14691.6 NODE_68381_length_232_cov_1.167513_g60440_i0reverse_frame_2 - 0.0058 16.4 0.1 0.0066 16.2 0.1 1.1 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Arteri_Gl PF00951.18 NODE_68381_length_232_cov_1.167513_g60440_i0reverse_frame_2 - 0.057 13.2 0.6 0.065 13.0 0.6 1.2 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF1664 PF07889.12 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.013 15.5 2.5 0.018 15.1 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Pox_A11 PF05061.13 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.019 14.3 0.9 0.022 14.1 0.9 1.0 1 0 0 1 1 1 0 Poxvirus A11 Protein XhlA PF10779.9 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.027 14.6 3.6 0.052 13.8 0.7 2.3 1 1 1 2 2 2 0 Haemolysin XhlA DUF2203 PF09969.9 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.046 14.4 0.6 0.054 14.2 0.6 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) ATP-synt_F6 PF05511.11 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.066 13.6 0.2 0.077 13.4 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase coupling factor 6 BLOC1_2 PF10046.9 NODE_68381_length_232_cov_1.167513_g60440_i0forward_frame_2 - 0.093 13.0 1.0 0.14 12.5 1.0 1.2 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DEC-1_N PF04625.13 NODE_68379_length_232_cov_1.177665_g60438_i0forward_frame_3 - 1.2 8.0 6.2 0.97 8.4 6.2 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Mannosyl_trans PF05007.13 NODE_68370_length_232_cov_1.213198_g60429_i0reverse_frame_3 - 0.035 14.0 1.5 0.033 14.1 1.5 1.1 1 0 0 1 1 1 0 Mannosyltransferase (PIG-M) Calpain_u2 PF16648.5 NODE_68367_length_232_cov_1.218274_g60426_i0forward_frame_2 - 0.17 12.4 0.1 0.26 11.8 0.1 1.3 1 0 0 1 1 1 0 Unstructured region on Calpain-3 GAT PF03127.14 NODE_68365_length_232_cov_1.218274_g60424_i0reverse_frame_2 - 0.049 13.9 1.3 0.11 12.8 0.7 1.7 1 1 1 2 2 2 0 GAT domain Protamine_like PF06382.11 NODE_68359_length_232_cov_1.248731_g60418_i0reverse_frame_2 - 0.025 14.7 0.2 0.028 14.6 0.2 1.1 1 0 0 1 1 1 0 Protamine and protamine like FANCI_S1 PF14675.6 NODE_68355_length_232_cov_1.350254_g60414_i0reverse_frame_2 - 0.011 15.3 0.1 0.012 15.2 0.1 1.0 1 0 0 1 1 1 0 FANCI solenoid 1 DUF2718 PF10918.8 NODE_68354_length_232_cov_1.350254_g60413_i0forward_frame_3 - 0.47 11.0 1.5 3.5 8.1 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2718) Microcin PF03526.13 NODE_68354_length_232_cov_1.350254_g60413_i0forward_frame_3 - 2.1 8.2 4.7 8.6 6.3 0.8 2.3 2 0 0 2 2 2 0 Colicin E1 (microcin) immunity protein S_4TM PF18159.1 NODE_68354_length_232_cov_1.350254_g60413_i0forward_frame_2 - 2.7 7.2 6.0 3.3 6.9 5.7 1.4 1 1 0 1 1 1 0 SMODS-associating 4TM effector domain Protamine_3 PF08188.11 NODE_68352_length_232_cov_1.360406_g60411_i0reverse_frame_2 - 0.057 13.6 1.3 0.079 13.2 1.3 1.2 1 0 0 1 1 1 0 Spermatozal protamine family Orf78 PF06024.12 NODE_68346_length_232_cov_1.416244_g60405_i0forward_frame_3 - 0.28 11.5 2.2 0.31 11.3 2.2 1.1 1 0 0 1 1 1 0 Orf78 (ac78) DUF2430 PF10353.9 NODE_68344_length_232_cov_1.421320_g60403_i0forward_frame_2 - 0.48 10.8 9.5 0.78 10.2 9.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2430) VIT1 PF01988.19 NODE_68342_length_232_cov_1.451777_g60401_i0forward_frame_3 - 0.1 12.5 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 VIT family Paramyxo_NS_C PF02725.14 NODE_68341_length_232_cov_1.477157_g60400_i0forward_frame_2 - 0.072 13.2 0.1 0.093 12.8 0.1 1.1 1 0 0 1 1 1 0 Non-structural protein C DUF3342 PF11822.8 NODE_68335_length_232_cov_1.538071_g60394_i0reverse_frame_3 - 7.9e-08 32.4 0.1 1.5e-07 31.5 0.0 1.4 2 0 0 2 2 2 1 Domain of unknown function (DUF3342) GTP_EFTU PF00009.27 NODE_68333_length_232_cov_1.553299_g60392_i0forward_frame_2 - 0.031 13.8 0.0 0.038 13.5 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain ERGIC_N PF13850.6 NODE_68333_length_232_cov_1.553299_g60392_i0forward_frame_2 - 0.061 13.7 0.0 0.063 13.6 0.0 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) OAD_gamma PF04277.13 NODE_68333_length_232_cov_1.553299_g60392_i0forward_frame_2 - 0.091 13.4 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF3641 PF12345.8 NODE_68330_length_232_cov_1.583756_g60389_i0forward_frame_2 - 0.081 13.0 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3641) YmcE_antitoxin PF15939.5 NODE_68329_length_232_cov_1.583756_g60388_i0reverse_frame_3 - 0.015 15.5 3.8 0.018 15.2 3.8 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system APOBEC4 PF18775.1 NODE_68320_length_232_cov_1.624365_g60379_i0forward_frame_2 - 0.028 14.6 0.5 0.041 14.0 0.5 1.4 1 1 0 1 1 1 0 APOBEC4 Homoserine_dh PF00742.19 NODE_68318_length_232_cov_1.634518_g60377_i0forward_frame_2 - 0.21 11.5 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 Homoserine dehydrogenase MerE PF05052.12 NODE_68316_length_232_cov_1.654822_g60375_i0reverse_frame_3 - 0.14 12.1 0.1 0.24 11.4 0.1 1.4 1 0 0 1 1 1 0 MerE protein Myosin_head PF00063.21 NODE_68314_length_232_cov_1.664975_g60373_i0forward_frame_2 - 0.097 10.9 0.0 0.1 10.8 0.0 1.1 1 0 0 1 1 1 0 Myosin head (motor domain) COX7C PF02935.16 NODE_68311_length_232_cov_1.685279_g60370_i0forward_frame_2 - 0.09 13.0 1.5 0.12 12.6 1.5 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc EF-hand_6 PF13405.6 NODE_68309_length_232_cov_1.695431_g60368_i0forward_frame_3 - 0.0068 16.3 0.8 0.016 15.1 0.1 1.9 1 1 1 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 NODE_68309_length_232_cov_1.695431_g60368_i0forward_frame_3 - 0.013 15.3 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 NODE_68309_length_232_cov_1.695431_g60368_i0forward_frame_3 - 0.066 12.8 0.3 0.13 11.8 0.2 1.6 1 1 0 1 1 1 0 EF hand Flp_N PF03930.14 NODE_68307_length_232_cov_1.705584_g60366_i0reverse_frame_3 - 0.0084 16.1 0.5 0.012 15.5 0.5 1.2 1 0 0 1 1 1 1 Recombinase Flp protein N-terminus DUF5418 PF17439.2 NODE_68307_length_232_cov_1.705584_g60366_i0reverse_frame_2 - 0.017 15.2 3.2 0.019 15.0 3.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5418) Rtf2 PF04641.12 NODE_68306_length_232_cov_1.720812_g60365_i0reverse_frame_3 - 0.033 13.5 0.2 0.035 13.5 0.2 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger Ribosomal_L11 PF00298.19 NODE_68306_length_232_cov_1.720812_g60365_i0reverse_frame_3 - 0.084 13.4 0.4 0.11 13.1 0.4 1.2 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain DUF4211 PF13926.6 NODE_68306_length_232_cov_1.720812_g60365_i0reverse_frame_2 - 1.8 8.6 5.7 2 8.5 5.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4211) DUF3149 PF11346.8 NODE_68305_length_232_cov_1.725888_g60364_i0reverse_frame_2 - 0.14 11.8 4.2 0.21 11.2 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) DotA PF11388.8 NODE_68303_length_232_cov_1.776650_g60362_i0reverse_frame_2 - 0.013 15.7 0.1 0.015 15.5 0.1 1.2 1 0 0 1 1 1 0 Phagosome trafficking protein DotA MUG113 PF13455.6 NODE_68303_length_232_cov_1.776650_g60362_i0forward_frame_2 - 0.0024 18.5 0.1 0.0038 17.9 0.1 1.3 1 0 0 1 1 1 1 Meiotically up-regulated gene 113 T5orf172 PF10544.9 NODE_68303_length_232_cov_1.776650_g60362_i0forward_frame_2 - 0.0094 16.5 0.2 0.016 15.8 0.2 1.4 1 0 0 1 1 1 1 T5orf172 domain Cellulase PF00150.18 NODE_68302_length_232_cov_1.781726_g60361_i0forward_frame_2 - 0.23 10.9 0.0 0.23 10.9 0.0 1.1 1 0 0 1 1 1 0 Cellulase (glycosyl hydrolase family 5) DUF2752 PF10825.8 NODE_68301_length_232_cov_1.802030_g60360_i0reverse_frame_2 - 1.2 9.2 3.8 1 9.5 0.2 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2752) zf-CCCH_4 PF18044.1 NODE_68298_length_232_cov_1.812183_g60357_i0reverse_frame_3 - 0.2 11.5 0.2 0.2 11.5 0.2 1.7 2 0 0 2 2 2 0 CCCH-type zinc finger Defensin_3 PF08131.11 NODE_68295_length_232_cov_1.822335_g60354_i0forward_frame_3 - 0.017 15.3 0.3 0.029 14.6 0.3 1.4 1 0 0 1 1 1 0 Defensin-like peptide family DUF4462 PF14692.6 NODE_68291_length_232_cov_1.873096_g60350_i0forward_frame_2 - 0.17 11.4 0.6 3.5 7.2 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4462) Bacteriocin_IIi PF11758.8 NODE_68290_length_232_cov_1.873096_g60349_i0reverse_frame_3 - 0.2 11.5 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 Aureocin-like type II bacteriocin MSP1a PF11670.8 NODE_68281_length_232_cov_2.065990_g60340_i0reverse_frame_3 - 0.67 9.2 5.9 0.84 8.9 5.9 1.2 1 1 0 1 1 1 0 Major surface protein 1a (MSP1a) DUF5360 PF17314.2 NODE_68280_length_232_cov_2.071066_g60339_i0reverse_frame_3 - 0.0095 16.0 1.4 0.0099 15.9 1.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5360) AA_permease_N PF08403.10 NODE_68280_length_232_cov_2.071066_g60339_i0forward_frame_2 - 0.11 12.0 0.0 0.11 12.0 0.0 1.3 2 0 0 2 2 2 0 Amino acid permease N-terminal Defensin_beta_2 PF13841.6 NODE_68277_length_232_cov_2.192893_g60336_i0reverse_frame_3 - 0.53 10.8 9.0 0.51 10.9 7.7 1.7 2 0 0 2 2 2 0 Beta defensin DUF2799 PF10973.8 NODE_68276_length_232_cov_2.192893_g60335_i0reverse_frame_3 - 2.1e-13 50.5 0.3 2.3e-13 50.3 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2799) DUF1240 PF06836.12 NODE_68276_length_232_cov_2.192893_g60335_i0forward_frame_3 - 0.00076 20.0 0.6 0.00088 19.8 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1240) MOR2-PAG1_N PF14222.6 NODE_68273_length_232_cov_2.269036_g60332_i0reverse_frame_3 - 0.0093 15.0 0.0 0.0093 15.0 0.0 1.0 1 0 0 1 1 1 1 Cell morphogenesis N-terminal HEAT PF02985.22 NODE_68273_length_232_cov_2.269036_g60332_i0reverse_frame_3 - 0.016 15.4 0.0 0.033 14.4 0.0 1.6 1 0 0 1 1 1 0 HEAT repeat Arm PF00514.23 NODE_68273_length_232_cov_2.269036_g60332_i0reverse_frame_3 - 0.052 13.6 0.1 0.17 11.9 0.0 1.8 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat MbeB_N PF04837.12 NODE_68271_length_232_cov_2.294416_g60330_i0reverse_frame_2 - 0.083 13.2 0.4 0.1 12.9 0.4 1.2 1 0 0 1 1 1 0 MbeB-like, N-term conserved region Osw5 PF17062.5 NODE_68269_length_232_cov_2.324873_g60328_i0reverse_frame_3 - 0.018 15.1 2.5 0.025 14.7 2.5 1.3 1 0 0 1 1 1 0 Outer spore wall 5 Gp5_C PF06715.12 NODE_68267_length_232_cov_2.345178_g60326_i0reverse_frame_3 - 0.049 13.8 1.4 0.23 11.6 0.4 2.4 1 1 1 2 2 2 0 Gp5 C-terminal repeat (3 copies) F420_oxidored PF03807.17 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.00027 21.4 0.2 0.00039 20.9 0.2 1.2 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.24 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.00048 20.6 0.1 0.00054 20.4 0.1 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain K_oxygenase PF13434.6 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.022 13.9 0.0 0.023 13.9 0.0 1.0 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) GFO_IDH_MocA PF01408.22 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.029 15.2 0.1 0.036 14.9 0.1 1.1 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.041 13.2 0.0 0.041 13.2 0.0 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.045 13.0 0.0 0.046 13.0 0.0 1.0 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.05 12.8 0.0 0.05 12.8 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Ldh_1_N PF00056.23 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.066 13.3 0.1 0.085 12.9 0.1 1.2 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain CoA_binding PF02629.19 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.092 13.4 0.1 0.11 13.2 0.1 1.1 1 0 0 1 1 1 0 CoA binding domain FMO-like PF00743.19 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.17 10.3 0.0 0.18 10.2 0.0 1.0 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Sacchrp_dh_NADP PF03435.18 NODE_68267_length_232_cov_2.345178_g60326_i0forward_frame_3 - 0.18 12.1 0.1 0.21 11.9 0.1 1.1 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF5431 PF17496.2 NODE_68265_length_232_cov_2.431472_g60324_i0reverse_frame_3 - 0.25 11.5 0.2 0.37 11.0 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5431) Ribosomal_S12 PF17487.2 NODE_68262_length_232_cov_2.507614_g60321_i0forward_frame_3 - 0.014 16.1 4.9 0.016 16.0 4.9 1.1 1 0 0 1 1 1 0 Ribosomal protein S12 NPCC PF08058.11 NODE_68262_length_232_cov_2.507614_g60321_i0forward_frame_3 - 0.64 10.1 2.6 0.73 9.9 2.6 1.1 1 0 0 1 1 1 0 Nuclear pore complex component ABC_tran PF00005.27 NODE_68259_length_232_cov_2.517766_g60318_i0reverse_frame_2 - 0.0012 19.4 0.0 0.0018 18.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_13 PF13166.6 NODE_68259_length_232_cov_2.517766_g60318_i0reverse_frame_2 - 0.038 12.6 0.1 0.042 12.5 0.1 1.0 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 NODE_68259_length_232_cov_2.517766_g60318_i0reverse_frame_2 - 0.086 12.2 0.3 0.095 12.1 0.3 1.1 1 0 0 1 1 1 0 Bacterial TniB protein ADK PF00406.22 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 1.7e-31 109.4 0.2 1.8e-31 109.2 0.2 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 1.6e-18 67.4 0.3 1.7e-18 67.3 0.3 1.0 1 0 0 1 1 1 1 AAA domain Hydin_ADK PF17213.3 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.00071 19.9 0.6 0.036 14.4 0.0 2.0 1 1 1 2 2 2 1 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.012 15.8 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.025 15.1 0.0 0.028 14.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.046 13.4 0.1 0.066 12.9 0.1 1.4 1 1 0 1 1 1 0 Cytidylate kinase Thymidylate_kin PF02223.17 NODE_68256_length_232_cov_2.609137_g60315_i0forward_frame_3 - 0.047 13.4 0.0 0.058 13.1 0.0 1.1 1 0 0 1 1 1 0 Thymidylate kinase ANAPC4_WD40 PF12894.7 NODE_68255_length_232_cov_2.634518_g60314_i0reverse_frame_3 - 0.083 13.2 0.0 0.2 12.0 0.0 1.6 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Mtp PF03821.16 NODE_68255_length_232_cov_2.634518_g60314_i0reverse_frame_2 - 0.065 12.8 0.6 0.062 12.9 0.6 1.2 1 0 0 1 1 1 0 Golgi 4-transmembrane spanning transporter ATP-grasp_6 PF18419.1 NODE_68254_length_232_cov_2.644670_g60313_i0forward_frame_2 - 0.095 12.3 0.2 0.19 11.4 0.1 1.5 2 0 0 2 2 2 0 ATP-grasp-like domain SIKE PF05769.11 NODE_68253_length_232_cov_2.659898_g60312_i0reverse_frame_2 - 0.0031 17.5 0.6 0.0045 16.9 0.6 1.2 1 0 0 1 1 1 1 SIKE family DUF3906 PF13046.6 NODE_68251_length_232_cov_2.680203_g60310_i0reverse_frame_2 - 0.13 12.4 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3906) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks348.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks348.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks348.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks348.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DuoxA PF10204.9 NODE_68249_length_232_cov_2.766497_g60308_i0forward_frame_2 - 0.015 14.3 2.1 0.017 14.1 2.1 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor NYD-SP12_N PF15015.6 NODE_68245_length_232_cov_2.868020_g60304_i0reverse_frame_3 - 0.13 10.7 0.0 0.13 10.6 0.0 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated, N-terminal Corona_NSP4_C PF16348.5 NODE_68243_length_232_cov_3.187817_g60302_i0reverse_frame_3 - 0.086 13.7 1.2 0.1 13.4 1.2 1.1 1 0 0 1 1 1 0 Coronavirus nonstructural protein 4 C-terminus DicB PF05358.11 NODE_68243_length_232_cov_3.187817_g60302_i0forward_frame_2 - 0.058 13.6 0.1 0.069 13.3 0.1 1.2 1 0 0 1 1 1 0 DicB protein Peptidase_M56 PF05569.11 NODE_68242_length_232_cov_3.218274_g60301_i0reverse_frame_2 - 0.11 11.7 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 BlaR1 peptidase M56 Carla_C4 PF01623.17 NODE_68240_length_232_cov_3.228426_g60299_i0reverse_frame_3 - 0.25 11.3 8.8 0.3 11.1 8.5 1.3 1 1 0 1 1 1 0 Carlavirus putative nucleic acid binding protein Ig_6 PF18452.1 NODE_68233_length_232_cov_3.725888_g60292_i0reverse_frame_3 - 0.09 12.4 0.9 0.09 12.4 0.9 1.6 2 0 0 2 2 2 0 Immunoglobulin domain ATE_C PF04377.15 NODE_68233_length_232_cov_3.725888_g60292_i0forward_frame_3 - 0.039 14.6 0.0 0.049 14.3 0.0 1.1 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, C terminus EGF PF00008.27 NODE_68232_length_232_cov_3.741117_g60291_i0forward_frame_2 - 0.0088 16.3 1.2 0.015 15.6 1.2 1.3 1 0 0 1 1 1 1 EGF-like domain cEGF PF12662.7 NODE_68232_length_232_cov_3.741117_g60291_i0forward_frame_2 - 0.035 14.0 1.4 0.054 13.4 1.4 1.4 1 0 0 1 1 1 0 Complement Clr-like EGF-like EGF_3 PF12947.7 NODE_68232_length_232_cov_3.741117_g60291_i0forward_frame_2 - 0.058 13.6 0.9 0.09 13.0 0.9 1.3 1 0 0 1 1 1 0 EGF domain TssO PF17561.2 NODE_68230_length_232_cov_3.939086_g60289_i0reverse_frame_3 - 0.032 14.3 1.1 0.046 13.8 1.1 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO DUF4083 PF13314.6 NODE_68230_length_232_cov_3.939086_g60289_i0reverse_frame_2 - 0.058 13.3 0.8 0.099 12.6 0.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) CAF20 PF17052.5 NODE_68229_length_232_cov_4.106599_g60288_i0reverse_frame_2 - 0.016 15.4 1.4 0.016 15.3 1.4 1.2 1 0 0 1 1 1 0 Cap associated factor Jagunal PF07086.12 NODE_68229_length_232_cov_4.106599_g60288_i0forward_frame_3 - 0.017 15.2 0.1 0.017 15.2 0.1 1.1 1 0 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis PCDO_beta_N PF12391.8 NODE_68227_length_232_cov_4.664975_g60286_i0reverse_frame_3 - 0.013 15.1 0.8 1.6 8.4 0.1 2.3 2 0 0 2 2 2 0 Protocatechuate 3,4-dioxygenase beta subunit N terminal Ycf15 PF10705.9 NODE_68226_length_232_cov_4.700508_g60285_i0reverse_frame_3 - 0.15 12.3 0.0 0.16 12.1 0.0 1.3 1 1 0 1 1 1 0 Chloroplast protein precursor Ycf15 putative CLP_protease PF00574.23 NODE_68226_length_232_cov_4.700508_g60285_i0forward_frame_3 - 8.7e-06 25.7 0.0 1.1e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Clp protease MSA-2c PF12238.8 NODE_68225_length_232_cov_6.000000_g60284_i0reverse_frame_3 - 8.6 6.3 5.8 9.9 6.1 5.8 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Mid2 PF04478.12 NODE_68224_length_232_cov_10.157360_g60283_i0reverse_frame_3 - 1.9 8.3 8.1 1.2 8.9 1.2 2.0 1 1 1 2 2 2 0 Mid2 like cell wall stress sensor Adeno_shaft PF00608.17 NODE_68223_length_232_cov_12.700508_g60282_i0forward_frame_2 - 0.16 11.8 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 Adenoviral fibre protein (repeat/shaft region) BCCT PF02028.17 NODE_68222_length_232_cov_13.908629_g60281_i0forward_frame_2 - 0.022 13.3 3.4 0.024 13.1 3.4 1.0 1 0 0 1 1 1 0 BCCT, betaine/carnitine/choline family transporter Med19 PF10278.9 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_3 - 1.2 9.0 23.2 1.2 9.0 23.2 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 CCDC106 PF15794.5 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_3 - 3 7.5 19.3 3.5 7.3 19.3 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 GAGA_bind PF06217.12 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_3 - 3.3 7.9 15.4 3.4 7.9 15.4 1.0 1 0 0 1 1 1 0 GAGA binding protein-like family RNA_polI_A34 PF08208.11 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_3 - 3.4 7.7 30.8 3.6 7.6 30.8 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF5553 PF17707.1 NODE_68221_length_232_cov_16.456853_g60280_i0reverse_frame_2 - 3.1 7.2 6.6 3.2 7.1 6.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5553) L_HMGIC_fpl PF10242.9 NODE_68221_length_232_cov_16.456853_g60280_i0forward_frame_3 - 0.95 9.6 13.7 1.1 9.5 13.7 1.0 1 0 0 1 1 1 0 Lipoma HMGIC fusion partner-like protein RasGEF PF00617.19 NODE_68219_length_232_cov_24.197970_g60278_i0reverse_frame_3 - 0.078 13.2 0.1 0.098 12.8 0.1 1.1 1 0 0 1 1 1 0 RasGEF domain ABC2_membrane_3 PF12698.7 NODE_68219_length_232_cov_24.197970_g60278_i0reverse_frame_2 - 0.044 12.9 2.9 0.044 12.9 2.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2633 PF11119.8 NODE_68219_length_232_cov_24.197970_g60278_i0reverse_frame_2 - 7.7 6.5 8.5 2 8.4 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2633) F_actin_cap_B PF01115.17 NODE_68218_length_232_cov_26.060914_g60277_i0reverse_frame_3 - 0.02 14.5 0.2 0.022 14.4 0.2 1.1 1 0 0 1 1 1 0 F-actin capping protein, beta subunit Dimerisation PF08100.11 NODE_68215_length_232_cov_32.969543_g60274_i0reverse_frame_2 - 0.025 14.6 0.0 0.034 14.2 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain zf-CGNR PF11706.8 NODE_68213_length_232_cov_39.492386_g60272_i0reverse_frame_2 - 0.021 14.7 0.1 0.033 14.0 0.1 1.4 1 0 0 1 1 1 0 CGNR zinc finger STAG PF08514.11 NODE_68211_length_232_cov_41.680203_g60270_i0reverse_frame_3 - 0.061 13.2 2.2 0.076 12.9 2.2 1.1 1 0 0 1 1 1 0 STAG domain CC2-LZ PF16516.5 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.00028 21.2 3.7 0.00036 20.8 3.7 1.1 1 0 0 1 1 1 1 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator V-SNARE PF05008.15 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.0019 18.5 2.7 0.0028 18.0 2.7 1.3 1 1 0 1 1 1 1 Vesicle transport v-SNARE protein N-terminus PKcGMP_CC PF16808.5 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.0022 17.8 0.6 0.0045 16.8 0.6 1.5 1 0 0 1 1 1 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Atg14 PF10186.9 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.042 12.9 3.7 0.046 12.8 3.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LcrG PF07216.12 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.071 13.0 0.2 0.098 12.6 0.2 1.2 1 0 0 1 1 1 0 LcrG protein NYD-SP28 PF14772.6 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.082 13.0 5.7 0.094 12.8 5.2 1.5 1 1 0 1 1 1 0 Sperm tail UPF0242 PF06785.11 NODE_68209_length_232_cov_46.583756_g60268_i0reverse_frame_3 - 0.14 12.3 4.0 0.18 11.9 4.0 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus zinc_ribbon_12 PF11331.8 NODE_68207_length_232_cov_47.751269_g60266_i0reverse_frame_3 - 0.1 12.5 0.4 0.1 12.5 0.4 1.8 3 0 0 3 3 3 0 Probable zinc-ribbon domain FAM60A PF15396.6 NODE_68207_length_232_cov_47.751269_g60266_i0reverse_frame_3 - 0.21 11.6 3.3 0.26 11.3 3.3 1.1 1 0 0 1 1 1 0 Protein Family FAM60A MerT PF02411.15 NODE_68206_length_232_cov_48.847716_g60265_i0reverse_frame_3 - 0.2 11.7 0.5 0.26 11.3 0.5 1.1 1 0 0 1 1 1 0 MerT mercuric transport protein Orf78 PF06024.12 NODE_68205_length_232_cov_51.583756_g60264_i0reverse_frame_3 - 0.047 14.0 0.0 0.077 13.3 0.0 1.3 1 0 0 1 1 1 0 Orf78 (ac78) DUF3899 PF13038.6 NODE_68205_length_232_cov_51.583756_g60264_i0reverse_frame_3 - 0.14 12.6 0.4 0.21 12.1 0.2 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3899) CagD PF16567.5 NODE_68205_length_232_cov_51.583756_g60264_i0reverse_frame_2 - 0.04 13.7 0.1 0.045 13.5 0.1 1.1 1 0 0 1 1 1 0 Pathogenicity island component CagD DUF3267 PF11667.8 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 0.032 14.5 10.0 0.04 14.2 10.0 1.1 1 0 0 1 1 1 0 Putative zincin peptidase DUF5383 PF17355.2 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 0.035 14.5 0.2 0.051 14.0 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5383) SPC25 PF06703.11 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 0.2 11.4 3.7 0.21 11.3 3.7 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Orf78 PF06024.12 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 0.57 10.5 8.2 0.044 14.1 3.4 1.6 1 1 1 2 2 2 0 Orf78 (ac78) DHHC PF01529.20 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 1 9.4 12.4 1.2 9.3 12.4 1.0 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF3488 PF11992.8 NODE_68205_length_232_cov_51.583756_g60264_i0forward_frame_3 - 3.6 6.4 8.3 4.4 6.2 8.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) Myticin-prepro PF10690.9 NODE_68204_length_232_cov_53.842640_g60263_i0reverse_frame_2 - 0.015 15.6 1.7 0.017 15.4 1.7 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel DUF5445 PF17520.2 NODE_68201_length_232_cov_55.583756_g60260_i0forward_frame_3 - 0.0088 15.9 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5445) BAMBI PF06211.12 NODE_68200_length_232_cov_55.873096_g60259_i0reverse_frame_2 - 0.049 13.9 1.4 0.061 13.6 1.4 1.2 1 0 0 1 1 1 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain AAA_7 PF12775.7 NODE_68197_length_232_cov_59.705584_g60256_i0forward_frame_3 - 8.6e-16 58.0 0.9 9.2e-16 57.9 0.9 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_22 PF13401.6 NODE_68197_length_232_cov_59.705584_g60256_i0forward_frame_3 - 0.032 14.5 0.1 0.032 14.5 0.1 1.0 1 0 0 1 1 1 0 AAA domain NLRC4_HD PF17889.1 NODE_68197_length_232_cov_59.705584_g60256_i0forward_frame_2 - 0.099 13.0 0.4 0.13 12.6 0.4 1.2 1 0 0 1 1 1 0 NLRC4 helical domain ETRAMP PF09716.10 NODE_68196_length_232_cov_63.060914_g60255_i0forward_frame_3 - 0.72 10.0 2.2 0.84 9.7 2.2 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) WWE PF02825.20 NODE_68195_length_232_cov_63.162437_g60254_i0reverse_frame_3 - 1.4e-06 28.8 0.3 1.6e-06 28.6 0.3 1.1 1 0 0 1 1 1 1 WWE domain NHase_alpha PF02979.16 NODE_68193_length_232_cov_65.360406_g60252_i0reverse_frame_3 - 0.034 13.5 0.1 0.22 10.8 0.1 1.9 1 1 1 2 2 2 0 Nitrile hydratase, alpha chain Resistin PF06954.11 NODE_68189_length_232_cov_73.654822_g60248_i0reverse_frame_3 - 0.0099 16.4 1.7 0.012 16.1 1.7 1.1 1 0 0 1 1 1 1 Resistin Laminin_B PF00052.18 NODE_68188_length_232_cov_75.091371_g60247_i0forward_frame_3 - 0.14 12.1 0.0 0.21 11.5 0.0 1.3 1 1 0 1 1 1 0 Laminin B (Domain IV) FliM PF02154.15 NODE_68187_length_232_cov_76.258883_g60246_i0forward_frame_2 - 0.026 14.4 0.1 0.029 14.3 0.1 1.0 1 0 0 1 1 1 0 Flagellar motor switch protein FliM DUF1828 PF08861.10 NODE_68185_length_232_cov_84.426396_g60244_i0reverse_frame_3 - 0.12 12.6 2.0 0.45 10.8 2.0 1.8 1 1 0 1 1 1 0 Domain of unknown function DUF1828 DUF4776 PF16003.5 NODE_68185_length_232_cov_84.426396_g60244_i0reverse_frame_3 - 0.34 9.9 11.1 0.38 9.7 11.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4776) V-set PF07686.17 NODE_68185_length_232_cov_84.426396_g60244_i0reverse_frame_2 - 0.071 13.3 2.8 0.079 13.1 2.8 1.2 1 0 0 1 1 1 0 Immunoglobulin V-set domain VF530 PF09905.9 NODE_68184_length_232_cov_84.969543_g60243_i0forward_frame_3 - 0.076 13.2 0.4 0.1 12.8 0.4 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 VirB3 PF05101.13 NODE_68183_length_232_cov_88.913706_g60242_i0reverse_frame_2 - 3.9 7.8 7.1 6.1 7.2 7.1 1.6 1 1 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein DUF4938 PF16292.5 NODE_68181_length_232_cov_93.796954_g60240_i0forward_frame_3 - 0.012 15.0 0.0 0.013 14.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4938) LIM PF00412.22 NODE_68178_length_232_cov_96.786802_g60237_i0forward_frame_3 - 0.084 13.1 1.8 0.12 12.7 1.8 1.3 1 0 0 1 1 1 0 LIM domain DUF543 PF04418.12 NODE_68175_length_232_cov_109.096447_g60234_i0reverse_frame_3 - 0.23 11.5 1.3 2.1 8.4 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF543) Dynein_light PF01221.18 NODE_68171_length_232_cov_131.984772_g60230_i0forward_frame_3 - 0.014 15.7 0.1 0.018 15.4 0.1 1.2 1 0 0 1 1 1 0 Dynein light chain type 1 RRP14 PF15459.6 NODE_68168_length_232_cov_230.365482_g60227_i0reverse_frame_2 - 0.0037 17.8 0.1 0.0048 17.5 0.1 1.1 1 0 0 1 1 1 1 60S ribosome biogenesis protein Rrp14 cNMP_binding PF00027.29 NODE_68163_length_233_cov_0.797980_g60222_i0forward_frame_2 - 3.5e-07 30.2 0.0 3.8e-07 30.1 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain GRAB PF10375.9 NODE_68162_length_233_cov_0.803030_g60221_i0reverse_frame_3 - 6.1 6.9 8.3 0.54 10.2 3.7 1.7 2 0 0 2 2 2 0 GRIP-related Arf-binding domain PAC4 PF16093.5 NODE_68158_length_233_cov_0.808081_g60217_i0reverse_frame_3 - 0.084 13.1 0.0 0.095 12.9 0.0 1.2 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 DUF2671 PF10877.8 NODE_68158_length_233_cov_0.808081_g60217_i0forward_frame_2 - 0.17 11.7 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2671) GSK-3_bind PF05350.12 NODE_68157_length_233_cov_0.863636_g60216_i0forward_frame_3 - 0.059 12.7 0.2 0.065 12.5 0.2 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding FlaC_arch PF05377.11 NODE_68152_length_233_cov_1.010101_g60211_i0reverse_frame_3 - 0.0047 17.3 0.7 0.0047 17.3 0.7 1.8 2 0 0 2 2 2 1 Flagella accessory protein C (FlaC) Hemocyanin_M PF00372.19 NODE_68152_length_233_cov_1.010101_g60211_i0reverse_frame_3 - 0.11 11.7 0.1 0.11 11.6 0.1 1.0 1 0 0 1 1 1 0 Hemocyanin, copper containing domain SNARE PF05739.19 NODE_68152_length_233_cov_1.010101_g60211_i0reverse_frame_3 - 0.12 12.4 1.0 0.2 11.7 1.0 1.4 1 0 0 1 1 1 0 SNARE domain bZIP_1 PF00170.21 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.0086 16.2 0.1 0.024 14.8 0.0 1.7 1 1 0 1 1 1 1 bZIP transcription factor FlaC_arch PF05377.11 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.036 14.5 0.1 0.11 12.9 0.0 1.7 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) LPP PF04728.13 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.038 14.4 0.2 1.8 9.0 0.1 2.1 1 1 1 2 2 2 0 Lipoprotein leucine-zipper Prefoldin_2 PF01920.20 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.053 13.5 0.0 0.067 13.1 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit Pox_A_type_inc PF04508.12 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.09 12.7 1.4 40 4.3 0.1 3.2 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat AIP3 PF03915.13 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.14 11.2 0.0 0.16 11.1 0.0 1.0 1 0 0 1 1 1 0 Actin interacting protein 3 Tektin PF03148.14 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.17 10.6 0.2 0.2 10.4 0.2 1.0 1 0 0 1 1 1 0 Tektin family Prefoldin PF02996.17 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.2 11.6 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit HALZ PF02183.18 NODE_68150_length_233_cov_1.055556_g60209_i0reverse_frame_2 - 0.3 11.3 2.9 4.1 7.7 0.2 2.6 2 1 1 3 3 3 0 Homeobox associated leucine zipper zf-SAP30 PF13866.6 NODE_68148_length_233_cov_1.070707_g60207_i0reverse_frame_2 - 0.037 14.1 0.4 0.037 14.1 0.4 2.0 2 1 0 2 2 2 0 SAP30 zinc-finger DUF5439 PF17507.2 NODE_68147_length_233_cov_1.090909_g60206_i0reverse_frame_2 - 0.0036 17.5 0.2 0.0045 17.2 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5439) DUF3947 PF13135.6 NODE_68146_length_233_cov_1.106061_g60205_i0forward_frame_2 - 0.0018 18.4 0.1 0.0022 18.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3947) FMO-like PF00743.19 NODE_68142_length_233_cov_1.166667_g60201_i0forward_frame_3 - 1.9e-06 26.6 0.3 1.9e-06 26.6 0.3 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like K_oxygenase PF13434.6 NODE_68142_length_233_cov_1.166667_g60201_i0forward_frame_3 - 0.013 14.6 0.4 0.014 14.6 0.4 1.0 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) BAP PF06639.11 NODE_68140_length_233_cov_1.196970_g60199_i0reverse_frame_2 - 4.8 7.6 8.4 6 7.3 8.4 1.3 1 1 0 1 1 1 0 Basal layer antifungal peptide (BAP) UPAR_LY6 PF00021.21 NODE_68140_length_233_cov_1.196970_g60199_i0forward_frame_3 - 0.019 15.6 0.3 0.022 15.5 0.3 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Lamprin PF06403.11 NODE_68139_length_233_cov_1.202020_g60198_i0forward_frame_2 - 0.0045 16.9 0.2 0.0045 16.9 0.2 1.1 1 0 0 1 1 1 1 Lamprin DUF5549 PF17703.1 NODE_68135_length_233_cov_1.207071_g60194_i0reverse_frame_3 - 7.3 6.2 8.9 7.8 6.1 8.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5549) zf-C3HC4_3 PF13920.6 NODE_68133_length_233_cov_1.212121_g60192_i0forward_frame_3 - 0.095 12.6 3.8 0.15 11.9 3.8 1.4 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF4824 PF16106.5 NODE_68130_length_233_cov_1.212121_g60189_i0reverse_frame_2 - 0.099 11.9 0.0 0.099 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4824) PGM_PMM_IV PF00408.20 NODE_68129_length_233_cov_1.212121_g60188_i0reverse_frame_2 - 0.014 15.6 0.0 0.019 15.1 0.0 1.2 1 1 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF2701 PF10857.8 NODE_68126_length_233_cov_1.212121_g60185_i0reverse_frame_2 - 0.16 12.0 0.7 0.16 12.0 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2701) DUF2207 PF09972.9 NODE_68126_length_233_cov_1.212121_g60185_i0reverse_frame_2 - 5.4 5.6 5.7 6.2 5.5 5.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Tudor_2 PF18104.1 NODE_68126_length_233_cov_1.212121_g60185_i0forward_frame_2 - 0.11 12.2 1.0 0.11 12.2 1.0 1.8 2 1 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain DUF4763 PF15960.5 NODE_68124_length_233_cov_1.212121_g60183_i0reverse_frame_2 - 0.077 12.3 2.8 0.1 11.9 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Peptidase_M41 PF01434.18 NODE_68121_length_233_cov_1.227273_g60180_i0forward_frame_3 - 6.9e-05 22.8 0.0 6.9e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M41 Peptidase_M41 PF01434.18 NODE_68121_length_233_cov_1.227273_g60180_i0forward_frame_2 - 0.00078 19.3 0.1 0.0012 18.7 0.1 1.3 1 1 0 1 1 1 1 Peptidase family M41 TM1506 PF08973.10 NODE_68119_length_233_cov_1.242424_g60178_i0reverse_frame_3 - 0.21 11.2 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1893) RVT_3 PF13456.6 NODE_68118_length_233_cov_1.257576_g60177_i0reverse_frame_2 - 0.17 11.7 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase-like DUF4824 PF16106.5 NODE_68114_length_233_cov_1.328283_g60173_i0reverse_frame_3 - 0.17 11.2 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4824) zf-RING_2 PF13639.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.1e-14 54.4 3.7 1.7e-14 53.9 3.7 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 5.5e-10 38.8 2.2 1.1e-09 37.9 2.2 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 6.4e-10 38.7 3.8 9.3e-10 38.2 3.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 3.1e-09 36.5 2.8 5.2e-09 35.8 2.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 7.9e-09 35.3 3.2 1.1e-08 34.9 3.2 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.4e-08 34.4 2.4 2e-08 34.0 2.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.9e-08 34.5 7.4 1e-07 32.1 7.4 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 2.9e-08 33.6 1.8 6.3e-08 32.5 0.4 1.9 1 1 1 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 9.9e-08 31.7 3.0 3.1e-07 30.1 3.3 1.6 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 3.7e-06 26.9 4.7 2e-05 24.6 4.7 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 7.7e-05 22.7 1.7 0.00018 21.6 1.7 1.6 1 1 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.00021 21.4 7.5 0.0096 16.1 7.5 2.4 1 1 0 1 1 1 1 FANCL C-terminal domain zf-RING_4 PF14570.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.00034 20.3 4.1 0.00058 19.6 4.1 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Zn_ribbon_17 PF17120.5 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.00039 20.0 7.3 0.00096 18.7 6.9 1.9 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-UDP PF14569.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.007 16.5 2.7 0.01 15.9 2.7 1.3 1 0 0 1 1 1 1 Zinc-binding RING-finger zf-Nse PF11789.8 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.0092 15.8 1.5 0.011 15.5 1.5 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.021 15.0 3.6 0.064 13.4 3.6 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING DUF1272 PF06906.11 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.022 14.8 2.8 0.022 14.8 2.8 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) Baculo_RING PF05883.11 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.045 13.8 1.2 0.064 13.2 1.2 1.2 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Zf_RING PF16744.5 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.048 13.8 0.4 0.048 13.8 0.4 1.8 1 1 1 2 2 2 0 KIAA1045 RING finger zf-C2HC_2 PF13913.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.069 13.1 1.1 0.069 13.1 1.1 1.9 2 0 0 2 2 1 0 zinc-finger of a C2HC-type zf-RING_6 PF14835.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.081 12.8 2.8 0.23 11.4 2.9 1.7 1 1 0 1 1 1 0 zf-RING of BARD1-type protein zf-Di19 PF05605.12 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.12 12.7 2.3 0.29 11.5 0.5 2.1 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-RING-like PF08746.11 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 0.13 12.6 5.5 0.25 11.7 5.5 1.7 1 1 0 1 1 1 0 RING-like domain zf-C2H2_4 PF13894.6 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.2 10.2 7.3 2 9.5 0.5 3.1 2 2 1 3 3 3 0 C2H2-type zinc finger zf-C3H2C3 PF17122.5 NODE_68111_length_233_cov_1.348485_g60170_i0forward_frame_3 - 1.5 8.9 9.0 0.35 10.9 3.7 2.4 2 1 0 2 2 2 0 Zinc-finger Cyclotide PF03784.13 NODE_68110_length_233_cov_1.353535_g60169_i0forward_frame_3 - 0.12 12.5 2.6 0.16 12.1 2.6 1.2 1 0 0 1 1 1 0 Cyclotide family HPIP PF15226.6 NODE_68110_length_233_cov_1.353535_g60169_i0forward_frame_2 - 0.1 13.0 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family DUF2613 PF11021.8 NODE_68109_length_233_cov_1.358586_g60168_i0reverse_frame_3 - 2 8.6 10.4 3.7 7.7 10.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) HIT PF01230.23 NODE_68109_length_233_cov_1.358586_g60168_i0forward_frame_3 - 0.0042 17.8 0.2 0.0055 17.4 0.2 1.1 1 0 0 1 1 1 1 HIT domain Spt20 PF12090.8 NODE_68109_length_233_cov_1.358586_g60168_i0forward_frame_3 - 0.59 9.7 14.1 0.6 9.7 14.1 1.1 1 0 0 1 1 1 0 Spt20 family Roughex PF06020.11 NODE_68109_length_233_cov_1.358586_g60168_i0forward_frame_3 - 3.6 6.6 5.5 3.5 6.6 5.5 1.0 1 0 0 1 1 1 0 Drosophila roughex protein zf-H2C2_2 PF13465.6 NODE_68108_length_233_cov_1.358586_g60167_i0forward_frame_3 - 0.053 14.0 0.4 0.053 14.0 0.4 2.8 3 1 0 3 3 3 0 Zinc-finger double domain NO_synthase PF02898.15 NODE_68106_length_233_cov_1.363636_g60165_i0forward_frame_2 - 0.14 11.2 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 Nitric oxide synthase, oxygenase domain PetN PF03742.14 NODE_68105_length_233_cov_1.383838_g60164_i0reverse_frame_2 - 3.1 7.8 4.9 7.1 6.6 0.4 2.6 2 1 0 2 2 2 0 PetN Tudor_3 PF18115.1 NODE_68105_length_233_cov_1.383838_g60164_i0forward_frame_3 - 0.11 12.4 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 DNA repair protein Crb2 Tudor domain DASH_Ask1 PF08655.10 NODE_68101_length_233_cov_1.404040_g60160_i0reverse_frame_3 - 0.086 12.7 0.7 0.29 11.0 0.2 1.9 2 0 0 2 2 2 0 DASH complex subunit Ask1 DUF3687 PF12459.8 NODE_68100_length_233_cov_1.414141_g60159_i0reverse_frame_2 - 5.9 6.5 9.2 0.26 10.8 1.8 2.1 1 1 1 2 2 2 0 D-Ala-teichoic acid biosynthesis protein DUF4256 PF14066.6 NODE_68099_length_233_cov_1.424242_g60158_i0reverse_frame_2 - 0.069 12.8 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) HoxA13_N PF12284.8 NODE_68097_length_233_cov_1.449495_g60156_i0reverse_frame_3 - 0.027 15.1 0.2 0.029 15.0 0.2 1.1 1 0 0 1 1 1 0 Hox protein A13 N terminal DUF645 PF04875.12 NODE_68093_length_233_cov_1.525253_g60152_i0reverse_frame_3 - 0.1 12.6 2.6 0.092 12.8 1.2 1.6 1 1 1 2 2 2 0 Protein of unknown function, DUF645 Pyr_redox_2 PF07992.14 NODE_68091_length_233_cov_1.535354_g60150_i0reverse_frame_2 - 0.0015 17.8 0.0 0.0015 17.8 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase IMPa_helical PF18642.1 NODE_68091_length_233_cov_1.535354_g60150_i0reverse_frame_2 - 0.11 12.9 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain CTXphi_pIII-N1 PF16710.5 NODE_68091_length_233_cov_1.535354_g60150_i0forward_frame_3 - 0.019 15.1 0.7 0.028 14.6 0.7 1.3 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII Defensin_5 PF18251.1 NODE_68090_length_233_cov_1.540404_g60149_i0reverse_frame_3 - 0.06 13.4 0.5 0.21 11.7 0.1 1.9 2 0 0 2 2 2 0 Fungal defensin Copsin Herpes_glycop PF01528.16 NODE_68087_length_233_cov_1.550505_g60146_i0reverse_frame_2 - 0.0015 17.4 0.2 0.0016 17.4 0.2 1.1 1 0 0 1 1 1 1 Herpesvirus glycoprotein M BTB PF00651.31 NODE_68087_length_233_cov_1.550505_g60146_i0forward_frame_3 - 5.5e-07 29.8 0.2 6.4e-07 29.6 0.2 1.2 1 0 0 1 1 1 1 BTB/POZ domain 17kDa_Anti_2 PF16998.5 NODE_68083_length_233_cov_1.585859_g60142_i0reverse_frame_2 - 0.36 10.8 1.6 0.44 10.5 1.6 1.1 1 0 0 1 1 1 0 17 kDa outer membrane surface antigen Glyc_hyd_38C_2 PF18230.1 NODE_68081_length_233_cov_1.606061_g60140_i0reverse_frame_3 - 0.11 12.6 0.2 0.15 12.2 0.1 1.3 1 1 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal sub-domain NUSAP PF16006.5 NODE_68081_length_233_cov_1.606061_g60140_i0reverse_frame_3 - 0.12 12.1 0.5 0.14 11.9 0.5 1.0 1 0 0 1 1 1 0 Nucleolar and spindle-associated protein WD40 PF00400.32 NODE_68080_length_233_cov_1.611111_g60139_i0reverse_frame_2 - 2.6e-05 24.9 0.4 7.7e-05 23.4 0.1 1.8 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_68080_length_233_cov_1.611111_g60139_i0reverse_frame_2 - 0.0034 17.7 0.1 0.0037 17.5 0.1 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Nucleoporin_N PF08801.11 NODE_68080_length_233_cov_1.611111_g60139_i0reverse_frame_2 - 0.014 14.2 0.1 0.014 14.2 0.1 1.0 1 0 0 1 1 1 0 Nup133 N terminal like U62_UL91 PF17442.2 NODE_68079_length_233_cov_1.611111_g60138_i0forward_frame_3 - 0.095 12.7 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins SipA PF09052.10 NODE_68076_length_233_cov_1.626263_g60135_i0reverse_frame_2 - 0.096 12.3 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 SipA N-terminal domain LRR_6 PF13516.6 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 4.2e-06 26.4 5.4 0.61 10.3 0.0 3.3 3 0 0 3 3 3 3 Leucine Rich repeat LRR_8 PF13855.6 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 7.8e-05 22.4 5.8 0.095 12.5 1.2 3.0 1 1 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 0.00062 20.1 5.9 0.11 13.0 1.2 2.8 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 0.0016 18.7 4.4 5.4 8.0 1.2 3.2 2 1 0 2 2 2 2 Leucine Rich Repeat LRR_9 PF14580.6 NODE_68076_length_233_cov_1.626263_g60135_i0forward_frame_3 - 0.071 12.6 0.0 3.2 7.2 0.0 2.0 1 1 1 2 2 2 0 Leucine-rich repeat Kringle PF00051.18 NODE_68075_length_233_cov_1.626263_g60134_i0forward_frame_2 - 0.015 15.6 2.1 0.018 15.3 2.1 1.2 1 0 0 1 1 1 0 Kringle domain CxC6 PF18721.1 NODE_68075_length_233_cov_1.626263_g60134_i0forward_frame_2 - 0.11 12.8 4.7 0.31 11.3 4.7 1.7 1 1 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases zinc_ribbon_2 PF13240.6 NODE_68075_length_233_cov_1.626263_g60134_i0forward_frame_2 - 0.96 9.3 0.2 0.96 9.3 0.2 3.3 3 1 1 4 4 4 0 zinc-ribbon domain zf-TRM13_CCCH PF11722.8 NODE_68075_length_233_cov_1.626263_g60134_i0forward_frame_2 - 4.4 7.1 6.7 0.4 10.5 0.4 2.3 2 1 1 3 3 3 0 CCCH zinc finger in TRM13 protein Gemini_mov PF01708.16 NODE_68073_length_233_cov_1.656566_g60132_i0forward_frame_3 - 0.6 9.9 6.5 1 9.2 6.5 1.4 1 0 0 1 1 1 0 Geminivirus putative movement protein Endothelin PF00322.17 NODE_68071_length_233_cov_1.671717_g60130_i0reverse_frame_2 - 0.086 12.5 2.2 0.16 11.6 2.2 1.4 1 0 0 1 1 1 0 Endothelin family Colicin_im PF03857.13 NODE_68070_length_233_cov_1.676768_g60129_i0forward_frame_2 - 0.024 14.6 2.5 0.053 13.5 2.5 1.6 1 1 0 1 1 1 0 Colicin immunity protein CBP_BcsF PF11120.8 NODE_68067_length_233_cov_1.722222_g60126_i0forward_frame_2 - 0.16 12.1 1.3 0.22 11.6 1.3 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF Allene_ox_cyc PF06351.11 NODE_68066_length_233_cov_1.732323_g60125_i0forward_frame_3 - 0.25 11.1 1.5 3 7.5 0.1 2.0 1 1 1 2 2 2 0 Allene oxide cyclase P2X_receptor PF00864.19 NODE_68064_length_233_cov_1.737374_g60123_i0reverse_frame_3 - 0.021 13.9 1.5 0.023 13.8 1.5 1.1 1 0 0 1 1 1 0 ATP P2X receptor Sugar_tr PF00083.24 NODE_68058_length_233_cov_1.797980_g60117_i0reverse_frame_3 - 0.029 13.3 0.1 0.036 12.9 0.1 1.2 1 0 0 1 1 1 0 Sugar (and other) transporter KIAA1430 PF13879.6 NODE_68056_length_233_cov_1.818182_g60115_i0forward_frame_2 - 0.049 14.4 5.4 0.062 14.1 5.4 1.1 1 0 0 1 1 1 0 KIAA1430 homologue WRW PF10206.9 NODE_68055_length_233_cov_1.843434_g60114_i0reverse_frame_2 - 0.016 15.5 1.4 0.018 15.4 1.4 1.1 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f ACOX PF01756.19 NODE_68053_length_233_cov_1.883838_g60112_i0reverse_frame_2 - 0.00032 20.3 0.0 0.00034 20.2 0.0 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase TH1 PF04858.13 NODE_68053_length_233_cov_1.883838_g60112_i0forward_frame_3 - 0.081 11.6 0.0 0.081 11.6 0.0 1.1 1 0 0 1 1 1 0 TH1 protein DUF4993 PF16384.5 NODE_68053_length_233_cov_1.883838_g60112_i0forward_frame_2 - 0.068 12.2 0.4 0.076 12.0 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF5097 PF17020.5 NODE_68053_length_233_cov_1.883838_g60112_i0forward_frame_2 - 0.095 13.0 1.3 0.11 12.9 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5097) NAD_binding_2 PF03446.15 NODE_68047_length_233_cov_1.974747_g60106_i0reverse_frame_3 - 0.0074 16.5 0.0 0.0087 16.2 0.0 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase DUF3482 PF11981.8 NODE_68043_length_233_cov_2.035354_g60102_i0reverse_frame_3 - 0.025 14.0 0.1 0.029 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) RNA_pol_N PF01194.17 NODE_68042_length_233_cov_2.121212_g60101_i0reverse_frame_2 - 0.084 13.2 1.3 0.084 13.2 1.3 2.4 2 1 0 2 2 2 0 RNA polymerases N / 8 kDa subunit zf-BED PF02892.15 NODE_68042_length_233_cov_2.121212_g60101_i0reverse_frame_2 - 0.85 9.7 6.6 9.1 6.4 1.8 2.3 2 0 0 2 2 2 0 BED zinc finger HscB_4_cys PF18256.1 NODE_68036_length_233_cov_2.217172_g60095_i0reverse_frame_2 - 0.086 12.7 0.5 0.086 12.7 0.5 2.9 3 2 1 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif zf-Sec23_Sec24 PF04810.15 NODE_68036_length_233_cov_2.217172_g60095_i0reverse_frame_2 - 0.14 12.3 0.1 0.14 12.3 0.1 2.2 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger NOA36 PF06524.12 NODE_68036_length_233_cov_2.217172_g60095_i0forward_frame_3 - 0.011 15.1 0.2 0.012 14.9 0.2 1.1 1 0 0 1 1 1 0 NOA36 protein SPATA24 PF15175.6 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.0023 17.8 2.9 0.0024 17.8 2.9 1.1 1 0 0 1 1 1 1 Spermatogenesis-associated protein 24 CC2-LZ PF16516.5 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.011 16.1 2.6 0.014 15.8 2.6 1.2 1 0 0 1 1 1 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator PKcGMP_CC PF16808.5 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.013 15.4 5.0 0.058 13.2 5.0 2.3 1 1 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase SF-assemblin PF06705.11 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.013 14.9 6.2 0.022 14.1 6.2 1.3 1 1 0 1 1 1 0 SF-assemblin/beta giardin bZIP_1 PF00170.21 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.023 14.8 0.9 0.023 14.8 0.9 2.3 1 1 1 2 2 2 0 bZIP transcription factor TSC22 PF01166.18 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.025 14.9 0.5 0.044 14.1 0.5 1.5 1 0 0 1 1 1 0 TSC-22/dip/bun family DUF641 PF04859.12 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.026 14.8 1.8 0.033 14.5 1.8 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Shugoshin_N PF07558.11 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.036 13.9 1.5 1.3 9.0 0.1 3.0 2 1 1 3 3 3 0 Shugoshin N-terminal coiled-coil region XhlA PF10779.9 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.12 12.6 4.2 0.22 11.7 4.2 1.6 1 1 0 1 1 1 0 Haemolysin XhlA IMD PF08397.11 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.18 11.2 4.9 0.21 10.9 4.9 1.0 1 0 0 1 1 1 0 IRSp53/MIM homology domain Tho2 PF11262.8 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 0.5 9.5 5.4 0.51 9.5 5.4 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 TMPIT PF07851.13 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 1 8.5 3.0 1.1 8.5 3.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein FlaC_arch PF05377.11 NODE_68034_length_233_cov_2.217172_g60093_i0reverse_frame_2 - 1.2 9.6 6.7 4.7 7.7 1.2 2.5 1 1 2 3 3 3 0 Flagella accessory protein C (FlaC) zf-UBP PF02148.19 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 2.3e-19 69.5 10.3 2.8e-19 69.2 10.3 1.1 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein zinc_ribbon_9 PF14369.6 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 0.0092 16.2 1.2 0.0092 16.2 1.2 3.3 2 1 2 4 4 4 1 zinc-ribbon zf-UBP_var PF17807.1 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 0.017 14.8 1.3 0.032 14.0 1.3 1.6 1 1 0 1 1 1 0 Variant UBP zinc finger zf-HIT PF04438.16 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 0.079 12.8 1.2 0.079 12.8 1.2 1.9 2 0 0 2 2 2 0 HIT zinc finger zf-B_box PF00643.24 NODE_68030_length_233_cov_2.232323_g60089_i0reverse_frame_3 - 0.26 11.5 12.7 0.74 10.0 6.3 2.3 1 1 1 2 2 2 0 B-box zinc finger Arm_vescicular PF18770.1 NODE_68029_length_233_cov_2.242424_g60088_i0forward_frame_3 - 0.02 14.8 0.5 2.3 8.2 0.1 2.4 2 1 0 2 2 2 0 Armadillo tether-repeat of vescicular transport factor CBP_BcsO PF17037.5 NODE_68027_length_233_cov_2.323232_g60086_i0reverse_frame_3 - 0.12 12.5 0.1 0.14 12.3 0.1 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsO Peptidase_C2 PF00648.21 NODE_68026_length_233_cov_2.333333_g60085_i0reverse_frame_3 - 5.6e-16 58.4 0.8 6e-16 58.3 0.8 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease rve PF00665.26 NODE_68022_length_233_cov_2.419192_g60081_i0forward_frame_2 - 0.00094 19.4 0.0 0.0017 18.6 0.0 1.4 1 1 0 1 1 1 1 Integrase core domain Peptidase_S78_2 PF14550.6 NODE_68022_length_233_cov_2.419192_g60081_i0forward_frame_2 - 0.012 15.7 0.0 0.014 15.5 0.0 1.0 1 0 0 1 1 1 0 Putative phage serine protease XkdF HTH_ABP1_N PF18107.1 NODE_68020_length_233_cov_2.479798_g60079_i0forward_frame_2 - 0.024 14.3 0.0 0.034 13.8 0.0 1.2 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain TraT PF05818.12 NODE_68016_length_233_cov_2.535354_g60075_i0reverse_frame_2 - 0.31 10.7 2.1 0.36 10.5 2.1 1.0 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein DnaJ PF00226.31 NODE_68014_length_233_cov_2.565657_g60073_i0reverse_frame_3 - 0.00026 21.0 0.0 0.00036 20.6 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain VARLMGL PF14383.6 NODE_68014_length_233_cov_2.565657_g60073_i0reverse_frame_2 - 0.074 12.6 0.1 0.15 11.6 0.1 1.6 1 0 0 1 1 1 0 DUF761-associated sequence motif T5orf172 PF10544.9 NODE_68013_length_233_cov_2.570707_g60072_i0reverse_frame_2 - 0.047 14.2 0.0 0.056 14.0 0.0 1.3 1 0 0 1 1 1 0 T5orf172 domain DBD_Tnp_Mut PF03108.15 NODE_68013_length_233_cov_2.570707_g60072_i0reverse_frame_2 - 0.049 13.6 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 MuDR family transposase DXP_synthase_N PF13292.6 NODE_68013_length_233_cov_2.570707_g60072_i0reverse_frame_2 - 0.084 12.1 0.4 0.091 12.0 0.4 1.0 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase DUF2109 PF09882.9 NODE_68013_length_233_cov_2.570707_g60072_i0forward_frame_2 - 0.023 14.7 0.4 0.72 9.9 0.1 2.3 1 1 1 2 2 2 0 Predicted membrane protein (DUF2109) Lact-deh-memb PF09330.11 NODE_68012_length_233_cov_2.580808_g60071_i0reverse_frame_3 - 3e-24 85.9 0.0 3.2e-24 85.8 0.0 1.0 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding ApoC-I PF04691.12 NODE_68012_length_233_cov_2.580808_g60071_i0reverse_frame_3 - 0.13 12.2 0.0 0.22 11.5 0.0 1.4 2 0 0 2 2 2 0 Apolipoprotein C-I (ApoC-1) HAD_SAK_1 PF10307.9 NODE_68012_length_233_cov_2.580808_g60071_i0forward_frame_2 - 0.12 12.2 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins Herpes_BBRF1 PF04793.12 NODE_68010_length_233_cov_2.585859_g60069_i0forward_frame_2 - 0.028 13.5 0.3 0.029 13.4 0.3 1.0 1 0 0 1 1 1 0 BRRF1-like protein Mannitol_dh_C PF08125.13 NODE_68009_length_233_cov_2.585859_g60068_i0reverse_frame_3 - 1.2e-38 133.0 0.0 1.3e-38 132.9 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Elf1 PF05129.13 NODE_68008_length_233_cov_2.616162_g60067_i0reverse_frame_3 - 0.21 11.6 4.7 0.31 11.1 4.7 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like COMM_domain PF07258.14 NODE_68007_length_233_cov_2.621212_g60066_i0reverse_frame_3 - 0.06 13.5 0.1 0.098 12.8 0.1 1.3 1 0 0 1 1 1 0 COMM domain DUF4133 PF13571.6 NODE_68005_length_233_cov_2.696970_g60064_i0reverse_frame_3 - 0.082 13.2 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) p47_phox_C PF08944.11 NODE_68004_length_233_cov_2.702020_g60063_i0forward_frame_3 - 3.5e-05 23.1 2.0 8.8e-05 21.8 2.0 1.7 1 0 0 1 1 1 1 NADPH oxidase subunit p47Phox, C terminal domain Lipid_bd PF12888.7 NODE_67997_length_233_cov_3.055556_g60056_i0reverse_frame_3 - 0.2 12.1 0.0 3.5 8.1 0.0 2.0 1 1 1 2 2 2 0 Lipid-binding putative hydrolase DUF3975 PF13126.6 NODE_67995_length_233_cov_3.323232_g60054_i0forward_frame_3 - 0.43 11.1 5.5 4.5 7.8 5.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3975) EssA PF10661.9 NODE_67994_length_233_cov_3.348485_g60053_i0reverse_frame_2 - 0.16 11.8 4.8 0.16 11.8 3.8 1.4 1 1 1 2 2 2 0 WXG100 protein secretion system (Wss), protein EssA DUF2207 PF09972.9 NODE_67992_length_233_cov_3.818182_g60051_i0forward_frame_2 - 0.024 13.4 0.0 0.024 13.4 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) UCH PF00443.29 NODE_67991_length_233_cov_4.272727_g60050_i0reverse_frame_3 - 0.016 14.7 0.0 0.017 14.6 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase DUF3522 PF12036.8 NODE_67990_length_233_cov_4.525253_g60049_i0reverse_frame_2 - 0.012 15.9 2.2 0.014 15.7 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3522) RNHCP PF12647.7 NODE_67988_length_233_cov_5.808081_g60047_i0forward_frame_3 - 0.19 11.7 4.1 5.4 7.1 0.7 2.1 2 0 0 2 2 2 0 RNHCP domain Prok-RING_1 PF14446.6 NODE_67988_length_233_cov_5.808081_g60047_i0forward_frame_3 - 1.3 9.1 5.6 3.1 7.8 0.2 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 DUF723 PF05265.13 NODE_67987_length_233_cov_7.929293_g60046_i0reverse_frame_3 - 0.35 10.8 5.2 0.26 11.2 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF723) DHHC PF01529.20 NODE_67986_length_233_cov_12.318182_g60045_i0forward_frame_3 - 1.2 9.3 11.0 1.9 8.6 11.0 1.4 1 1 0 1 1 1 0 DHHC palmitoyltransferase DDE_Tnp_ISAZ013 PF07592.11 NODE_67981_length_233_cov_26.772727_g60040_i0reverse_frame_3 - 0.031 13.3 3.9 0.037 13.0 3.9 1.0 1 0 0 1 1 1 0 Rhodopirellula transposase DDE domain Gsf2 PF11055.8 NODE_67973_length_233_cov_35.585859_g60032_i0reverse_frame_2 - 0.12 11.1 0.1 0.12 11.1 0.1 1.2 1 0 0 1 1 1 0 Glucose signalling factor 2 ClpS PF02617.17 NODE_67972_length_233_cov_35.808081_g60031_i0reverse_frame_2 - 0.084 12.7 0.0 0.088 12.6 0.0 1.2 1 0 0 1 1 1 0 ATP-dependent Clp protease adaptor protein ClpS Ribosomal_L23eN PF03939.13 NODE_67972_length_233_cov_35.808081_g60031_i0forward_frame_2 - 0.0057 16.8 0.0 0.006 16.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L23, N-terminal domain Herpes_U15 PF05613.11 NODE_67968_length_233_cov_43.565657_g60027_i0reverse_frame_2 - 0.033 14.9 0.3 0.035 14.8 0.3 1.1 1 0 0 1 1 1 0 Human herpesvirus U15 protein ResB PF05140.14 NODE_67968_length_233_cov_43.565657_g60027_i0forward_frame_3 - 7.2 5.2 5.2 4.3 6.0 0.7 1.9 1 1 1 2 2 2 0 ResB-like family Rer1 PF03248.13 NODE_67966_length_233_cov_49.782828_g60025_i0reverse_frame_2 - 0.045 13.5 1.3 0.045 13.5 1.3 1.1 1 0 0 1 1 1 0 Rer1 family Hydrolase_3 PF08282.12 NODE_67959_length_233_cov_58.752525_g60018_i0forward_frame_2 - 2.3e-07 30.8 0.0 3.3e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF3029 PF11230.8 NODE_67959_length_233_cov_58.752525_g60018_i0forward_frame_2 - 0.05 12.0 0.0 0.055 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3029) NTP_transf_3 PF12804.7 NODE_67959_length_233_cov_58.752525_g60018_i0forward_frame_2 - 0.063 13.6 0.0 0.065 13.6 0.0 1.1 1 0 0 1 1 1 0 MobA-like NTP transferase domain SYCP2_SLD PF18584.1 NODE_67957_length_233_cov_59.388889_g60016_i0reverse_frame_3 - 0.042 14.1 1.0 0.051 13.8 1.0 1.1 1 0 0 1 1 1 0 Synaptonemal complex 2 Spt16M-like domain Adipogenin PF15202.6 NODE_67950_length_233_cov_69.136364_g60009_i0forward_frame_3 - 0.035 14.1 0.5 0.054 13.5 0.5 1.3 1 0 0 1 1 1 0 Adipogenin Sigma_reg_N PF13800.6 NODE_67950_length_233_cov_69.136364_g60009_i0forward_frame_2 - 0.33 11.2 4.6 0.49 10.7 0.3 2.1 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF4637 PF15470.6 NODE_67949_length_233_cov_69.141414_g60008_i0reverse_frame_2 - 0.086 12.6 0.7 0.1 12.3 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) TMEM37 PF15108.6 NODE_67948_length_233_cov_70.166667_g60007_i0reverse_frame_3 - 0.42 10.5 2.3 3.3 7.5 2.3 1.9 1 1 0 1 1 1 0 Voltage-dependent calcium channel gamma-like subunit protein family SelP_C PF04593.14 NODE_67948_length_233_cov_70.166667_g60007_i0reverse_frame_2 - 0.024 14.6 0.2 0.027 14.5 0.2 1.1 1 0 0 1 1 1 0 Selenoprotein P, C terminal region HopW1-1 PF15457.6 NODE_67946_length_233_cov_74.909091_g60005_i0reverse_frame_3 - 0.086 12.1 0.0 0.098 11.9 0.0 1.1 1 0 0 1 1 1 0 Type III T3SS secreted effector HopW1-1/HopPmaA MASE5 PF17178.4 NODE_67946_length_233_cov_74.909091_g60005_i0forward_frame_2 - 0.017 15.0 3.2 0.017 14.9 3.2 1.0 1 0 0 1 1 1 0 Membrane-associated sensor HalOD1 PF18545.1 NODE_67945_length_233_cov_75.787879_g60004_i0reverse_frame_3 - 0.038 14.3 0.0 0.051 13.8 0.0 1.1 1 0 0 1 1 1 0 Halobacterial output domain 1 YoeB_toxin PF06769.14 NODE_67945_length_233_cov_75.787879_g60004_i0forward_frame_2 - 0.018 15.0 0.0 0.023 14.7 0.0 1.1 1 0 0 1 1 1 0 YoeB-like toxin of bacterial type II toxin-antitoxin system FUSC PF04632.12 NODE_67945_length_233_cov_75.787879_g60004_i0forward_frame_2 - 0.22 10.0 0.0 0.22 10.0 0.0 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Sushi_2 PF09014.10 NODE_67944_length_233_cov_78.934343_g60003_i0forward_frame_2 - 0.12 12.3 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain Sec62 PF03839.16 NODE_67943_length_233_cov_81.146465_g60002_i0forward_frame_2 - 6 6.3 10.2 6.8 6.1 10.2 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 DUF4483 PF14825.6 NODE_67942_length_233_cov_83.439394_g60001_i0forward_frame_2 - 0.011 15.5 0.4 0.013 15.3 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4483) Aminotran_3 PF00202.21 NODE_67942_length_233_cov_83.439394_g60001_i0forward_frame_2 - 0.034 12.8 0.0 0.04 12.6 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class-III CSN7a_helixI PF18392.1 NODE_67941_length_233_cov_83.767677_g60000_i0reverse_frame_3 - 0.42 10.5 2.9 0.59 10.1 2.9 1.2 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain DBD_Tnp_Mut PF03108.15 NODE_67939_length_233_cov_94.767677_g59998_i0forward_frame_2 - 0.13 12.3 1.5 0.17 11.9 1.5 1.2 1 0 0 1 1 1 0 MuDR family transposase DUF3128 PF11326.8 NODE_67938_length_233_cov_96.797980_g59997_i0reverse_frame_3 - 0.09 13.2 0.2 0.11 12.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3128) DUF2098 PF09871.9 NODE_67938_length_233_cov_96.797980_g59997_i0reverse_frame_2 - 0.066 13.6 0.3 0.091 13.1 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) UL2 PF08196.11 NODE_67934_length_233_cov_126.702020_g59993_i0reverse_frame_3 - 0.16 11.9 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 UL2 protein Ank_4 PF13637.6 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 7.7e-15 55.1 0.1 3.4e-09 37.0 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 6.2e-14 52.4 0.1 9.7e-14 51.7 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 1.9e-11 43.1 0.0 0.00055 20.2 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 7.2e-08 32.6 0.2 0.0011 19.3 0.0 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_67931_length_233_cov_154.914141_g59990_i0reverse_frame_3 - 2e-07 31.2 0.1 0.00015 22.0 0.0 2.6 3 0 0 3 3 3 2 Ankyrin repeat ASFV_360 PF01671.16 NODE_67928_length_233_cov_187.686869_g59987_i0reverse_frame_3 - 0.17 11.4 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 African swine fever virus multigene family 360 protein Thioredoxin_2 PF13098.6 NODE_67924_length_233_cov_288.873737_g59983_i0forward_frame_2 - 0.071 13.6 0.0 0.087 13.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Cys_rich_CPXG PF14255.6 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_3 - 1.8 8.5 5.2 4.6 7.2 0.2 2.5 3 0 0 3 3 3 0 Cysteine-rich CPXCG Ank_2 PF12796.7 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 5.5e-17 62.1 0.0 5.8e-17 62.1 0.0 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 7.7e-13 47.4 0.0 7.8e-06 25.9 0.0 2.3 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 7.5e-12 45.1 0.1 5.2e-05 23.5 0.0 2.4 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 2.1e-10 40.6 0.0 0.00025 21.3 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_67923_length_233_cov_307.303030_g59982_i0reverse_frame_2 - 2.2e-10 40.9 0.0 0.00041 20.9 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) DUF1970 PF09301.10 NODE_67922_length_233_cov_574.939394_g59981_i0reverse_frame_3 - 0.12 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1970) Acetyltransf_14 PF03421.16 NODE_67921_length_233_cov_801.005051_g59980_i0reverse_frame_3 - 0.11 12.5 0.3 0.1 12.6 0.3 1.3 1 1 0 1 1 1 0 YopJ Serine/Threonine acetyltransferase DUF3482 PF11981.8 NODE_67915_length_233_cov_28215.984848_g59974_i0forward_frame_3 - 0.048 13.1 8.7 0.059 12.8 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks349.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks349.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks349.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks349.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:21:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Iso_dh PF00180.20 ORF24991 - 6.9e-98 328.0 0.1 8.4e-98 327.7 0.1 1.1 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase PAP2 PF01569.21 ORF2236 - 7.8e-05 22.5 9.3 0.0014 18.4 9.3 2.5 1 1 0 1 1 1 1 PAP2 superfamily Phage_holin_5_2 PF16079.5 ORF2236 - 4.2 7.8 9.7 2.5 8.5 0.2 3.3 4 0 0 4 4 4 0 Phage holin family Hol44, in holin superfamily V Iso_dh PF00180.20 ORF18535 - 6.9e-98 328.0 0.1 8.4e-98 327.7 0.1 1.1 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase LIAS_N PF16881.5 ORF17003 - 0.1 13.0 0.4 0.1 13.0 0.4 2.8 2 1 1 3 3 3 0 N-terminal domain of lipoyl synthase of Radical_SAM family CDC14 PF08045.11 ORF117276 - 0.0086 15.2 0.1 0.013 14.6 0.1 1.3 1 0 0 1 1 1 1 Cell division control protein 14, SIN component Pkinase PF00069.25 ORF115563 - 2.1e-65 220.7 0.3 4e-65 219.8 0.1 1.5 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF115563 - 3.8e-32 111.6 0.0 5.8e-32 111.0 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF115563 - 9.3e-30 99.9 13.1 8.3e-08 31.3 3.0 4.9 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF115563 - 2.3e-24 83.2 5.9 1.1e-06 28.1 0.1 4.8 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF115563 - 5.6e-23 81.2 5.9 4.1e-11 43.2 1.0 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF115563 - 8.5e-22 75.6 20.3 4.3e-06 26.0 0.1 5.6 4 1 2 6 6 6 4 EF hand EF-hand_8 PF13833.6 ORF115563 - 2.4e-12 46.5 13.8 0.0015 18.3 2.0 4.6 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF115563 - 7.4e-09 35.9 4.6 5.9e-05 23.4 1.5 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF115563 - 3.3e-07 30.2 6.5 0.00025 21.0 1.1 2.9 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand Kinase-like PF14531.6 ORF115563 - 2.2e-05 23.9 0.0 5.1e-05 22.7 0.0 1.6 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF115563 - 2.4e-05 23.8 0.0 5.2e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Dockerin_1 PF00404.18 ORF115563 - 0.0031 17.7 4.4 18 5.6 0.3 4.5 4 1 0 4 4 4 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF115563 - 0.016 15.5 0.0 1.5 9.2 0.0 2.9 2 1 0 2 2 2 0 EF-hand domain APH PF01636.23 ORF115563 - 0.018 15.0 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF2790 PF10976.8 ORF109037 - 0.0038 17.2 0.7 0.052 13.6 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2790) Tubulin PF00091.25 ORF104872 - 3.5e-52 177.5 0.0 5.2e-52 176.9 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF104872 - 9.1e-50 168.0 0.1 1.5e-49 167.3 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF104872 - 0.027 14.2 0.0 0.099 12.3 0.0 2.0 3 0 0 3 3 3 0 Tubulin domain zf-RanBP PF00641.18 ORF10465 - 0.0026 17.0 2.5 0.0054 16.0 2.5 1.5 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others SSB PF00436.25 ORF10465 - 0.071 13.2 0.9 7.4 6.7 0.1 2.6 2 0 0 2 2 2 0 Single-strand binding protein family Stc1 PF12898.7 ORF10465 - 0.25 11.9 3.8 0.51 10.9 0.4 2.8 2 0 0 2 2 2 0 Stc1 domain Pkinase PF00069.25 ORF103287 - 1.2e-68 231.4 0.3 2.2e-68 230.5 0.3 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF103287 - 1.4e-31 109.8 0.0 2.6e-31 108.9 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF103287 - 6.8e-29 97.2 15.3 3.8e-07 29.2 2.2 5.6 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF103287 - 2.4e-24 83.1 10.8 9.2e-06 25.2 0.2 5.6 5 0 0 5 5 5 4 EF-hand domain EF-hand_7 PF13499.6 ORF103287 - 4.7e-23 81.4 13.9 7.5e-12 45.5 0.5 3.5 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF103287 - 2.4e-22 77.3 17.3 3e-06 26.5 0.1 5.6 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF103287 - 2.5e-18 65.7 18.5 6.3e-06 25.9 1.7 6.3 3 1 3 6 6 6 4 EF-hand domain pair Pkinase_fungal PF17667.1 ORF103287 - 5.1e-06 25.5 0.0 8.5e-06 24.8 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase SPARC_Ca_bdg PF10591.9 ORF103287 - 5.2e-06 26.8 10.1 0.00032 21.0 0.6 2.9 2 1 1 3 3 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 ORF103287 - 2.5e-05 23.7 0.1 4.3e-05 23.0 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_9 PF14658.6 ORF103287 - 3.8e-05 23.9 0.4 0.0038 17.5 0.1 2.7 2 0 0 2 2 2 1 EF-hand domain Kinase-like PF14531.6 ORF103287 - 7.5e-05 22.2 0.0 0.00014 21.3 0.0 1.5 1 1 0 1 1 1 1 Kinase-like PMBR PF09373.10 ORF103287 - 0.0049 17.0 0.0 9.3 6.6 0.1 4.4 4 1 0 4 4 3 0 Pseudomurein-binding repeat YrbL-PhoP_reg PF10707.9 ORF103287 - 0.0054 16.3 0.3 0.017 14.7 0.1 1.9 2 0 0 2 2 2 1 PhoP regulatory network protein YrbL tRNA_synt_1c_R1 PF04558.15 ORF103287 - 0.053 13.5 0.9 0.88 9.6 0.1 3.1 3 1 1 4 4 4 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 FliG_N PF14842.6 ORF103287 - 0.088 13.4 2.5 4.6 7.8 0.1 3.7 4 0 0 4 4 4 0 FliG N-terminal domain EF-hand_10 PF14788.6 ORF103287 - 0.16 11.9 0.2 0.16 11.9 0.2 3.6 4 1 0 4 4 4 0 EF hand EF-hand_11 PF08976.11 ORF103287 - 0.19 12.7 0.7 26 5.7 0.1 3.1 1 1 2 3 3 2 0 EF-hand domain EF-hand_4 PF12763.7 ORF103287 - 0.53 10.3 14.1 0.28 11.1 2.2 3.7 2 1 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand MgtE_N PF03448.17 ORF103287 - 3.8 8.2 6.6 29 5.3 0.1 3.4 4 0 0 4 4 3 0 MgtE intracellular N domain DnaJ_C PF01556.18 ORF95550 - 1.6e-37 128.8 1.2 2.3e-37 128.4 1.2 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 ORF95550 - 9e-21 73.8 0.7 2e-20 72.7 0.7 1.6 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 ORF95550 - 6.4e-06 26.4 6.7 1.5e-05 25.2 6.7 1.6 1 0 0 1 1 1 1 DnaJ central domain Glyco_hydro_4 PF02056.16 ORF95550 - 0.095 12.2 0.0 0.21 11.1 0.0 1.5 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase FliG_N PF14842.6 ORF95550 - 0.17 12.4 0.3 0.31 11.6 0.3 1.4 1 0 0 1 1 1 0 FliG N-terminal domain Zip PF02535.22 ORF82501 - 1e-42 146.6 3.0 1.4e-42 146.1 3.0 1.2 1 0 0 1 1 1 1 ZIP Zinc transporter PsbW PF07123.12 ORF82501 - 0.033 14.2 0.0 0.077 13.0 0.0 1.6 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) Cadherin_C_2 PF16492.5 ORF66525 - 1.4 9.7 5.5 1.1 10.1 0.1 2.8 2 1 0 2 2 2 0 Cadherin cytoplasmic C-terminal ERGIC_N PF13850.6 ORF62994 - 0.011 16.0 0.1 0.044 14.1 0.1 2.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Pkinase PF00069.25 ORF61798 - 1.3e-55 188.6 0.0 1.8e-55 188.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF61798 - 5.7e-24 84.8 0.0 9.2e-24 84.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF61798 - 4.8e-05 22.8 0.0 8.7e-05 22.0 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF61798 - 8.9e-05 21.9 0.0 0.00014 21.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF61798 - 0.034 13.7 0.1 0.14 11.7 0.1 1.9 2 0 0 2 2 2 0 Choline/ethanolamine kinase Pkinase_fungal PF17667.1 ORF61798 - 0.071 11.9 0.0 0.13 11.0 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF61798 - 0.073 13.0 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF61798 - 0.11 11.5 0.0 0.2 10.7 0.0 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 Fungal_KA1 PF16797.5 ORF61798 - 0.18 11.5 0.1 0.37 10.5 0.1 1.6 1 0 0 1 1 1 0 Fungal kinase associated-1 domain eIF2A PF08662.11 ORF59274 - 5.2e-08 33.0 6.1 0.003 17.5 0.4 3.8 3 1 1 4 4 4 3 Eukaryotic translation initiation factor eIF2A Exo_endo_phos_2 PF14529.6 ORF59274 - 0.057 13.3 1.5 7.3 6.5 0.1 2.8 1 1 1 2 2 2 0 Endonuclease-reverse transcriptase Transposase_24 PF03004.14 ORF59274 - 1.4 9.0 5.8 3.4 7.8 1.1 2.7 3 0 0 3 3 3 0 Plant transposase (Ptta/En/Spm family) ABC_tran PF00005.27 ORF53266 - 1.1e-30 106.9 0.1 2.1e-30 106.0 0.1 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF53266 - 3.6e-08 33.1 1.0 0.00044 19.8 0.2 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF53266 - 5.9e-06 26.3 1.5 0.0019 18.1 0.9 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF53266 - 0.0032 17.2 0.0 0.0032 17.2 0.0 1.8 2 0 0 2 2 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF53266 - 0.0088 16.1 1.2 0.022 14.8 0.1 2.2 2 1 0 2 2 2 1 50S ribosome-binding GTPase ABC_membrane PF00664.23 ORF53266 - 0.013 15.2 0.9 0.018 14.7 0.9 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region AAA_16 PF13191.6 ORF53266 - 0.028 14.8 0.0 0.071 13.5 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 ORF53266 - 0.033 13.8 0.0 0.07 12.8 0.0 1.5 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_23 PF13476.6 ORF53266 - 0.052 14.0 1.4 0.14 12.7 1.4 1.9 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF53266 - 0.062 13.2 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 ORF53266 - 0.065 13.0 0.1 0.42 10.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 ORF53266 - 0.11 12.2 0.7 0.24 11.1 0.7 1.6 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 ORF53266 - 0.21 11.2 4.8 0.1 12.3 1.3 2.2 2 1 0 2 2 2 0 AAA ATPase domain DUF87 PF01935.17 ORF53266 - 0.21 11.6 2.9 0.31 11.1 0.1 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain Sugar_tr PF00083.24 ORF50614 - 1.3e-21 77.0 16.6 1.6e-21 76.8 16.6 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF50614 - 1.8e-16 60.0 30.4 1.8e-16 60.0 30.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Cation_ATPase_C PF00689.21 ORF50614 - 0.99 9.1 16.7 0.097 12.4 0.9 3.6 3 1 0 3 3 3 0 Cation transporting ATPase, C-terminus DUF2304 PF10066.9 ORF50614 - 6.1 7.1 8.6 9.6 6.5 3.7 3.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2304) ERGIC_N PF13850.6 ORF49280 - 0.011 16.0 0.1 0.044 14.1 0.1 2.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Asp PF00026.23 ORF2270 - 1.7e-39 136.1 0.3 2.1e-39 135.8 0.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF2270 - 6.4e-07 29.8 0.6 3.5e-05 24.1 0.0 2.8 2 1 1 3 3 3 1 Xylanase inhibitor N-terminal Peptidase_M13 PF01431.21 ORF2270 - 0.02 14.5 0.0 0.048 13.2 0.0 1.6 1 0 0 1 1 1 0 Peptidase family M13 PA PF02225.22 ORF17784 - 5.2e-08 32.8 0.0 1.8e-07 31.1 0.0 1.8 2 0 0 2 2 2 1 PA domain Thioredoxin_4 PF13462.6 ORF17784 - 0.067 13.4 0.0 0.15 12.3 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin 7TM_GPCR_Srb PF02175.16 ORF17784 - 0.19 11.5 1.6 0.3 10.8 1.6 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srb DnaJ PF00226.31 ORF142323 - 1.1e-06 28.6 1.6 4.8e-06 26.6 0.0 2.8 3 0 0 3 3 3 1 DnaJ domain DIX PF00778.17 ORF142323 - 0.00076 19.3 0.7 0.0016 18.3 0.7 1.5 1 0 0 1 1 1 1 DIX domain DUF1870 PF08965.10 ORF139993 - 0.00075 19.5 0.1 0.0021 18.1 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1870) Rep_fac_C PF08542.11 ORF139993 - 0.16 12.4 3.7 13 6.3 0.6 2.7 2 1 0 2 2 2 0 Replication factor C C-terminal domain Thioredoxin_6 PF13848.6 ORF133347 - 3.3e-09 36.9 7.4 1.7e-08 34.6 0.6 2.8 2 2 1 3 3 3 2 Thioredoxin-like domain ABC_tran PF00005.27 ORF12748 - 1.7e-30 106.4 0.1 3.2e-30 105.4 0.1 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF12748 - 3.8e-08 33.0 1.0 0.00049 19.6 0.2 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF12748 - 5e-06 26.5 0.7 0.0015 18.4 0.5 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF12748 - 0.0032 17.2 0.0 0.0032 17.2 0.0 1.8 2 0 0 2 2 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF12748 - 0.0055 16.8 0.5 0.021 14.9 0.0 2.2 2 1 0 2 2 2 1 50S ribosome-binding GTPase ABC_membrane PF00664.23 ORF12748 - 0.013 15.2 0.9 0.018 14.7 0.9 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region AAA_16 PF13191.6 ORF12748 - 0.025 15.0 0.0 0.052 13.9 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 ORF12748 - 0.038 13.6 0.0 0.07 12.8 0.0 1.5 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_15 PF13175.6 ORF12748 - 0.041 13.6 2.6 0.053 13.2 0.4 2.3 2 1 0 2 2 2 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF12748 - 0.058 13.3 0.0 0.13 12.1 0.0 1.8 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 ORF12748 - 0.076 12.7 0.2 0.45 10.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF12748 - 0.093 13.2 0.3 0.093 13.2 0.3 1.8 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 ORF12748 - 0.14 11.9 0.9 0.32 10.7 0.9 1.6 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF12748 - 0.3 11.1 3.5 0.31 11.1 0.2 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain Peptidase_C14 PF00656.22 ORF117906 - 3.8e-11 43.4 0.0 9.1e-11 42.2 0.0 1.6 2 0 0 2 2 2 1 Caspase domain DUF4094 PF13334.6 ORF117906 - 0.055 13.9 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) SET PF00856.28 ORF114664 - 9.6e-07 29.3 0.0 2.7e-06 27.9 0.0 1.8 1 1 0 1 1 1 1 SET domain DUF5506 PF17611.2 ORF114664 - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5506) DUF676 PF05057.14 ORF110538 - 7.8e-30 104.0 0.1 1.3e-29 103.3 0.1 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF110538 - 4e-08 33.4 0.0 5.7e-08 32.9 0.0 1.3 1 0 0 1 1 1 1 Palmitoyl protein thioesterase PGAP1 PF07819.13 ORF110538 - 1.3e-06 28.3 0.0 7.4e-06 25.8 0.0 2.4 2 1 0 2 2 2 1 PGAP1-like protein LCAT PF02450.15 ORF110538 - 0.0001 21.6 0.2 0.00019 20.7 0.2 1.5 1 1 0 1 1 1 1 Lecithin:cholesterol acyltransferase Abhydrolase_1 PF00561.20 ORF110538 - 0.0034 17.1 0.1 0.047 13.3 0.0 2.6 1 1 1 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF110538 - 0.035 13.4 0.0 0.098 11.9 0.0 1.7 2 0 0 2 2 2 0 Serine aminopeptidase, S33 DUF900 PF05990.12 ORF110538 - 0.066 12.7 0.0 0.49 9.9 0.0 2.1 1 1 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) MORN PF02493.20 ORF10663 - 3.9e-32 108.2 39.6 1e-05 25.1 2.6 7.3 7 0 0 7 7 7 6 MORN repeat PMR5N PF14416.6 ORF10663 - 1.5 9.2 6.5 37 4.7 0.1 4.4 2 2 3 5 5 5 0 PMR5 N terminal Domain Alpha-mann_mid PF09261.11 NODE_12916_length_1231_cov_718.062709_g9666_i0forward_frame_1 - 2.8e-14 53.0 0.0 5e-14 52.2 0.0 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 NODE_12916_length_1231_cov_718.062709_g9666_i0forward_frame_1 - 8.8e-13 48.3 0.2 1.4e-12 47.6 0.2 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain MLANA PF14991.6 NODE_12880_length_1233_cov_159.076795_g9641_i0reverse_frame_1 - 0.54 10.6 3.0 0.69 10.2 0.5 2.2 2 0 0 2 2 2 0 Protein melan-A VSP PF03302.13 NODE_12880_length_1233_cov_159.076795_g9641_i0reverse_frame_1 - 1.3 7.8 31.9 4.9 5.9 28.4 2.0 1 1 1 2 2 2 0 Giardia variant-specific surface protein Nramp PF01566.18 NODE_12820_length_1235_cov_180.299167_g9597_i0reverse_frame_2 - 2.6e-98 329.3 8.0 2.6e-98 329.3 8.0 1.7 2 0 0 2 2 2 1 Natural resistance-associated macrophage protein DUF4149 PF13664.6 NODE_12820_length_1235_cov_180.299167_g9597_i0reverse_frame_2 - 0.0034 17.7 6.6 0.12 12.8 0.1 3.5 3 1 0 3 3 3 2 Domain of unknown function (DUF4149) 7tm_7 PF08395.12 NODE_12820_length_1235_cov_180.299167_g9597_i0reverse_frame_2 - 0.025 13.8 11.1 0.16 11.1 4.4 2.5 3 0 0 3 3 3 0 7tm Chemosensory receptor Sigma_reg_N PF13800.6 NODE_12820_length_1235_cov_180.299167_g9597_i0reverse_frame_2 - 0.075 13.3 3.3 48 4.3 0.1 3.7 3 0 0 3 3 3 0 Sigma factor regulator N-terminal Cytochrom_B_C PF00032.17 NODE_12820_length_1235_cov_180.299167_g9597_i0reverse_frame_2 - 5.4 7.4 8.1 0.45 10.8 1.3 2.7 2 2 1 3 3 3 0 Cytochrome b(C-terminal)/b6/petD APH PF01636.23 ORF91226 - 0.00057 19.9 0.1 0.0011 19.0 0.1 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF91226 - 0.0037 16.7 0.0 0.0054 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF91226 - 0.0097 15.2 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF91226 - 0.028 13.2 0.0 0.039 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase PAS_9 PF13426.7 ORF89179 - 5.7e-11 42.6 0.0 1.7e-10 41.1 0.0 1.7 2 0 0 2 2 2 1 PAS domain PAS_3 PF08447.12 ORF89179 - 1.4e-05 25.3 0.0 3.4e-05 24.0 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS PF00989.25 ORF89179 - 0.022 14.8 0.0 0.048 13.7 0.0 1.5 1 0 0 1 1 1 0 PAS fold Ribosomal_L4 PF00573.22 ORF85718 - 3.2e-38 131.3 0.2 3.2e-38 131.3 0.2 1.6 2 0 0 2 2 2 1 Ribosomal protein L4/L1 family Ribos_L4_asso_C PF14374.6 ORF85718 - 7e-20 70.9 5.4 7e-20 70.9 5.4 1.9 2 0 0 2 2 2 1 60S ribosomal protein L4 C-terminal domain Cwf_Cwc_15 PF04889.12 ORF85718 - 0.0089 15.8 14.1 0.014 15.2 14.1 1.3 1 0 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein NOA36 PF06524.12 ORF85718 - 0.02 14.2 11.3 0.034 13.5 11.3 1.3 1 0 0 1 1 1 0 NOA36 protein CxC3 PF18804.1 ORF82363 - 0.15 11.9 2.3 0.28 11.0 1.5 1.9 1 1 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases Lipase_3 PF01764.25 ORF77022 - 8.2e-22 77.6 0.0 1.4e-21 76.8 0.0 1.4 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 ORF77022 - 4.4e-05 23.1 0.0 0.00015 21.4 0.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Thioesterase PF00975.20 ORF77022 - 0.04 14.0 0.0 0.059 13.5 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Abhydrolase_6 PF12697.7 ORF77022 - 0.35 11.5 3.3 5.2 7.6 3.6 1.9 1 1 0 1 1 1 0 Alpha/beta hydrolase family Ion_trans PF00520.31 ORF76674 - 0.017 14.4 9.0 0.93 8.7 9.0 2.2 1 1 0 1 1 1 0 Ion transport protein Glucos_trans_II PF14264.6 ORF76674 - 0.017 14.5 4.1 0.084 12.2 4.0 2.0 1 1 0 1 1 1 0 Glucosyl transferase GtrII CxC3 PF18804.1 ORF73641 - 0.15 11.9 2.3 0.28 11.0 1.5 1.9 1 1 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases Codanin-1_C PF15296.6 ORF73010 - 0.19 11.8 0.2 0.19 11.8 0.2 2.0 2 0 0 2 2 2 0 Codanin-1 C-terminus TPH PF13868.6 ORF69025 - 3.3e-49 167.3 149.0 4.1e-49 167.0 149.0 1.1 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain Aminotran_4 PF01063.19 ORF63691 - 1.9e-20 73.7 0.0 2.4e-20 73.4 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV Syndecan PF01034.20 ORF60049 - 0.021 14.7 0.2 0.021 14.7 0.2 1.7 2 0 0 2 2 2 0 Syndecan domain SRTM1 PF15872.5 ORF60049 - 0.036 14.2 3.4 0.49 10.6 0.1 2.7 2 0 0 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 FeoB_associated PF12669.7 ORF60049 - 1 9.8 5.3 5 7.6 1.1 2.7 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein Baculo_11_kDa PF06143.11 ORF60049 - 1.1 8.9 4.5 2.7 7.6 0.7 2.4 2 0 0 2 2 2 0 Baculovirus 11 kDa family Lustrin_cystein PF14625.6 ORF60049 - 3.8 7.9 8.5 1.9 8.9 5.6 2.0 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain Aminotran_5 PF00266.19 ORF56314 - 1.3e-89 300.7 0.0 1.6e-89 300.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 ORF56314 - 3.3e-06 25.9 0.1 7.1e-06 24.8 0.0 1.5 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 ORF56314 - 1.3e-05 24.7 0.1 1.3e-05 24.6 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 ORF56314 - 0.0081 15.5 0.1 0.013 14.8 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pkinase PF00069.25 ORF39725 - 2.7e-53 181.0 0.3 4.6e-53 180.3 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39725 - 5.2e-20 71.8 0.0 1e-19 70.9 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF39725 - 6.5e-18 62.9 7.2 6.6e-05 22.2 0.0 4.8 4 0 0 4 4 4 3 EF hand EF-hand_7 PF13499.6 ORF39725 - 4e-16 59.2 5.4 6.1e-12 45.8 0.1 3.5 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF39725 - 6.6e-15 53.7 5.8 0.00017 21.3 0.1 4.4 4 0 0 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 ORF39725 - 9.7e-14 50.1 3.6 0.00023 20.5 0.0 3.7 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF39725 - 2.4e-10 40.1 4.5 2.3e-08 33.8 0.2 3.6 3 0 0 3 3 3 1 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF39725 - 1.3e-07 31.9 1.3 0.00029 21.1 1.1 3.0 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EFhand_Ca_insen PF08726.10 ORF39725 - 1.1e-05 25.4 0.1 0.00016 21.7 0.0 2.4 2 0 0 2 2 2 1 Ca2+ insensitive EF hand EF-hand_4 PF12763.7 ORF39725 - 0.0018 18.2 0.2 0.012 15.6 0.3 2.3 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand Kdo PF06293.14 ORF39725 - 0.0034 16.7 0.2 0.0087 15.4 0.0 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF39725 - 0.0046 16.9 0.0 0.0081 16.1 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Caleosin PF05042.13 ORF39725 - 0.021 14.8 0.6 2.5 8.0 0.1 3.1 2 2 1 3 3 3 0 Caleosin related protein Kinase-like PF14531.6 ORF39725 - 0.031 13.6 0.0 0.074 12.4 0.0 1.6 1 1 0 1 1 1 0 Kinase-like EF-hand_9 PF14658.6 ORF39725 - 0.044 14.1 0.2 0.34 11.3 0.1 2.5 3 0 0 3 3 3 0 EF-hand domain Sigma70_r1_1 PF03979.14 ORF39725 - 0.051 13.6 0.2 0.36 10.9 0.4 2.4 2 1 0 2 2 2 0 Sigma-70 factor, region 1.1 DUF2073 PF09846.9 ORF39725 - 0.18 11.7 2.6 1.2 9.0 0.2 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2073) CxC3 PF18804.1 ORF38835 - 0.15 11.9 2.3 0.28 11.0 1.5 1.9 1 1 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases His_Phos_2 PF00328.22 ORF29557 - 4.9e-18 65.6 0.4 6.5e-16 58.7 0.3 2.3 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) COX1 PF00115.20 ORF2439 - 1.6e-90 304.1 44.1 1.8e-90 303.9 44.1 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I ERGIC_N PF13850.6 ORF21731 - 0.015 15.6 1.2 0.04 14.3 0.3 2.1 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TMCO5 PF14992.6 ORF20496 - 0.0097 15.5 0.1 0.0097 15.5 0.1 2.1 3 0 0 3 3 3 1 TMCO5 family Nuc_sug_transp PF04142.15 ORF18018 - 7.4e-13 48.3 0.3 1.2e-12 47.6 0.3 1.3 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF18018 - 3.7e-05 23.9 28.4 0.0042 17.2 7.1 3.0 2 2 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 ORF18018 - 0.00021 21.3 0.6 0.0007 19.6 0.6 1.9 1 0 0 1 1 1 1 Putative transmembrane family 234 CRT-like PF08627.10 ORF18018 - 0.057 12.4 19.3 1.3 7.9 0.6 3.0 2 1 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like UAA PF08449.11 ORF18018 - 0.066 12.4 16.3 0.0054 16.0 9.2 2.2 1 1 1 2 2 2 0 UAA transporter family DMT_6 PF04342.12 ORF18018 - 0.13 12.4 11.0 2 8.6 1.7 2.7 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) DUF4293 PF14126.6 ORF18018 - 0.22 11.8 7.5 0.065 13.5 1.7 2.9 2 2 0 2 2 2 0 Domain of unknown function (DUF4293) DUF2244 PF10003.9 ORF18018 - 1.7 8.3 0.0 1.7 8.3 0.0 3.0 4 1 0 4 4 4 0 Integral membrane protein (DUF2244) DUF4131 PF13567.6 ORF18018 - 9.8 5.8 6.2 13 5.4 0.1 3.3 2 1 1 4 4 4 0 Domain of unknown function (DUF4131) Nop52 PF05997.12 ORF16679 - 5.3e-38 131.0 0.2 8.9e-38 130.2 0.2 1.4 1 0 0 1 1 1 1 Nucleolar protein,Nop52 TERB2 PF15101.6 ORF16679 - 4.8 7.2 6.9 8.6 6.4 6.9 1.4 1 0 0 1 1 1 0 Telomere-associated protein TERB2 Phage_GPL PF05926.11 ORF163 - 0.077 13.0 0.5 0.15 12.1 0.5 1.4 1 0 0 1 1 1 0 Phage head completion protein (GPL) B56 PF01603.20 ORF151283 - 2.4e-106 356.2 14.3 3.1e-106 355.8 14.3 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) RFC1 PF08519.12 ORF147353 - 1.3e-14 54.6 0.0 2.1e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 Replication factor RFC1 C terminal domain PhyH PF05721.13 ORF141261 - 3.9e-05 24.0 0.7 8.9e-05 22.8 0.7 1.6 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Nuc_sug_transp PF04142.15 ORF140112 - 7.3e-13 48.4 0.3 1.2e-12 47.6 0.3 1.3 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF140112 - 1.7e-05 25.0 30.0 0.0042 17.2 7.1 3.0 2 2 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 ORF140112 - 0.0002 21.3 0.6 0.0007 19.6 0.6 2.0 1 0 0 1 1 1 1 Putative transmembrane family 234 CRT-like PF08627.10 ORF140112 - 0.048 12.6 19.6 0.95 8.3 0.7 3.0 2 1 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like DMT_6 PF04342.12 ORF140112 - 0.1 12.8 11.8 1.4 9.2 2.3 2.7 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) UAA PF08449.11 ORF140112 - 0.18 11.0 18.5 0.013 14.7 10.9 2.2 1 1 1 2 2 2 0 UAA transporter family DUF2244 PF10003.9 ORF140112 - 1.7 8.3 0.0 1.7 8.3 0.0 3.2 4 1 0 4 4 4 0 Integral membrane protein (DUF2244) GST_C_3 PF14497.6 ORF133394 - 1.2e-11 44.6 0.0 8.2e-05 22.7 0.0 2.3 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF133394 - 1.3e-09 38.0 0.7 0.002 18.1 0.2 2.5 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF133394 - 5e-09 36.3 0.0 0.00031 20.9 0.0 2.3 2 0 0 2 2 2 2 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF133394 - 0.00043 20.8 0.0 0.00087 19.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF133394 - 0.047 14.0 0.0 0.2 12.0 0.0 2.0 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain Glutaredoxin2_C PF04399.13 ORF133394 - 0.065 13.1 0.0 0.78 9.6 0.0 2.2 2 0 0 2 2 2 0 Glutaredoxin 2, C terminal domain Nuc_sug_transp PF04142.15 ORF126896 - 7.2e-13 48.4 0.3 1.2e-12 47.6 0.3 1.3 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF126896 - 5.6e-06 26.6 29.8 0.0042 17.2 7.1 3.0 2 2 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 ORF126896 - 0.0002 21.4 0.6 0.0007 19.6 0.6 2.0 1 0 0 1 1 1 1 Putative transmembrane family 234 CRT-like PF08627.10 ORF126896 - 0.017 14.0 19.9 0.31 9.9 0.8 3.0 2 1 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like DMT_6 PF04342.12 ORF126896 - 0.14 12.4 12.2 1.8 8.8 2.6 2.7 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) DUF2975 PF11188.8 ORF126896 - 1.1 9.2 15.7 0.88 9.5 2.0 3.7 3 1 0 3 3 3 0 Protein of unknown function (DUF2975) DUF2244 PF10003.9 ORF126896 - 1.7 8.3 0.0 1.7 8.3 0.0 3.1 4 1 0 4 4 4 0 Integral membrane protein (DUF2244) APH PF01636.23 ORF12386 - 0.00057 19.9 0.1 0.0011 19.0 0.1 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF12386 - 0.0037 16.7 0.0 0.0054 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF12386 - 0.0097 15.2 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF12386 - 0.028 13.2 0.0 0.039 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Fis1_TPR_C PF14853.6 ORF123033 - 0.57 10.3 3.0 0.6 10.2 0.5 2.4 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat Zip PF02535.22 ORF123033 - 3.4 6.8 8.4 0.53 9.5 0.4 2.1 2 0 0 2 2 2 0 ZIP Zinc transporter DUF2400 PF09674.10 ORF123033 - 5.1 7.0 11.1 0.76 9.7 4.7 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2400) Caldesmon PF02029.15 ORF11631 - 0.00071 18.5 5.1 0.00074 18.4 5.1 1.1 1 0 0 1 1 1 1 Caldesmon RPN7 PF10602.9 ORF11631 - 0.38 10.4 8.5 1 9.1 7.5 2.1 2 0 0 2 2 2 0 26S proteasome subunit RPN7 Exonuc_VII_L PF02601.15 ORF11631 - 0.65 9.5 7.8 1 8.9 7.8 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4407 PF14362.6 ORF11631 - 1.7 8.0 6.4 3 7.1 6.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Remorin_C PF03763.13 ORF11631 - 1.9 8.4 14.5 5.9 6.8 14.5 1.9 1 1 0 1 1 1 0 Remorin, C-terminal region DUF1700 PF08006.11 ORF11631 - 2.4 7.6 5.1 6.2 6.3 5.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) COX1 PF00115.20 ORF11625 - 1.6e-90 304.1 44.1 1.8e-90 303.9 44.1 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I EP400_N PF15790.5 ORF11349 - 0.0047 15.8 7.8 0.37 9.6 1.0 2.5 2 0 0 2 2 2 2 E1A-binding protein p400, N-terminal HAP2-GCS1 PF10699.9 ORF11349 - 0.24 11.4 1.6 29 4.8 0.1 2.8 2 0 0 2 2 2 0 Male gamete fusion factor Nuc_sug_transp PF04142.15 ORF110769 - 7.5e-13 48.3 0.3 1.2e-12 47.6 0.3 1.3 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF110769 - 3.7e-05 23.9 28.4 0.0042 17.2 7.1 3.0 2 2 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 ORF110769 - 0.0002 21.3 0.6 0.0007 19.6 0.6 2.0 1 0 0 1 1 1 1 Putative transmembrane family 234 CRT-like PF08627.10 ORF110769 - 0.057 12.4 19.3 1.3 7.9 0.6 3.0 2 1 0 2 2 2 0 CRT-like, chloroquine-resistance transporter-like UAA PF08449.11 ORF110769 - 0.066 12.4 16.3 0.0054 16.0 9.2 2.2 1 1 1 2 2 2 0 UAA transporter family DMT_6 PF04342.12 ORF110769 - 0.13 12.4 11.0 2 8.6 1.7 2.7 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) DUF4293 PF14126.6 ORF110769 - 0.22 11.8 7.5 0.065 13.5 1.7 2.9 2 2 0 2 2 2 0 Domain of unknown function (DUF4293) DUF2244 PF10003.9 ORF110769 - 1.7 8.3 0.0 1.7 8.3 0.0 3.0 4 1 0 4 4 4 0 Integral membrane protein (DUF2244) APH PF01636.23 ORF108342 - 0.00057 19.9 0.1 0.0011 19.0 0.1 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF108342 - 0.0037 16.7 0.0 0.0054 16.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF108342 - 0.0097 15.2 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF108342 - 0.028 13.2 0.0 0.039 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase LRR_8 PF13855.6 ORF105993 - 0.12 12.2 2.8 1.5 8.6 0.1 3.3 3 0 0 3 3 3 0 Leucine rich repeat Mu-like_Pro PF10123.9 ORF105993 - 5.6 6.4 8.1 1.5 8.3 1.7 2.6 2 1 1 3 3 3 0 Mu-like prophage I protein CxC3 PF18804.1 ORF105843 - 0.15 11.9 2.3 0.28 11.0 1.5 1.9 1 1 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases PH_5 PF15405.6 NODE_12939_length_1230_cov_1261.750628_g9022_i1forward_frame_1 - 0.073 13.2 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 Pleckstrin homology domain Abhydro_lipase PF04083.16 ORF9959 - 2.4e-15 55.9 0.1 2.7e-14 52.5 0.1 2.3 1 1 1 2 2 2 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF9959 - 5.1e-13 49.3 0.6 3.8e-08 33.3 0.4 2.6 2 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF9959 - 0.00018 20.9 0.0 4.3 6.5 0.0 4.0 3 1 0 3 3 3 2 Serine aminopeptidase, S33 DLH PF01738.18 ORF9959 - 0.011 15.3 0.0 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 Dienelactone hydrolase family DUF676 PF05057.14 ORF9959 - 0.063 12.8 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Ank_5 PF13857.6 ORF97196 - 3.2e-21 75.1 1.6 2.6e-09 37.1 0.0 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF97196 - 2.2e-20 73.0 1.2 1.5e-13 51.2 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF97196 - 5.9e-19 68.2 4.0 7.5e-13 48.7 0.2 3.7 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF97196 - 8.7e-13 47.2 0.9 0.073 13.7 0.1 4.6 4 0 0 4 4 4 4 Ankyrin repeat Ank PF00023.30 ORF97196 - 1.6e-12 47.3 0.9 0.0019 18.5 0.0 3.8 4 0 0 4 4 4 3 Ankyrin repeat DUF5020 PF16412.5 ORF97196 - 0.17 11.7 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5020) Oxysterol_BP PF01237.18 ORF9672 - 1.1e-17 64.0 0.1 1.6e-17 63.4 0.1 1.3 1 0 0 1 1 1 1 Oxysterol-binding protein AAA_23 PF13476.6 ORF9672 - 0.034 14.7 0.9 0.083 13.4 0.9 1.7 1 0 0 1 1 1 0 AAA domain REC104 PF17378.2 ORF9672 - 0.072 12.9 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 Meiotic recombination protein REC104 Kinesin PF00225.23 ORF94782 - 3.6e-94 315.4 7.4 4.2e-94 315.2 7.4 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF94782 - 1.1e-23 83.9 1.2 3.5e-23 82.2 1.2 1.9 1 0 0 1 1 1 1 Microtubule binding Csd3_N PF18059.1 ORF94782 - 0.086 13.4 0.4 0.34 11.5 0.4 2.0 1 0 0 1 1 1 0 Csd3 N-terminal PAH PF02671.21 ORF94782 - 0.18 12.0 0.9 0.83 9.8 0.3 2.5 4 0 0 4 4 4 0 Paired amphipathic helix repeat Thioesterase PF00975.20 ORF93169 - 5.1e-06 26.8 0.0 9.6e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Thioesterase domain FSH1 PF03959.13 ORF93169 - 0.0037 17.0 0.0 0.0091 15.7 0.0 1.7 2 0 0 2 2 2 1 Serine hydrolase (FSH1) Pkinase PF00069.25 ORF82849 - 1.7e-63 214.4 0.0 2.4e-63 214.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82849 - 1.2e-29 103.5 0.0 1.6e-29 103.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF82849 - 8.1e-05 22.1 0.1 0.00014 21.3 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF82849 - 0.015 15.0 0.5 0.3 10.7 0.1 2.3 1 1 1 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF82849 - 0.062 13.2 0.1 1.2 9.0 0.1 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF82849 - 0.14 11.1 7.2 0.068 12.1 0.2 3.0 2 1 0 3 3 3 0 Haspin like kinase domain Ribosomal_S17 PF00366.20 ORF82849 - 2.1 8.5 4.8 0.75 9.9 0.2 2.3 2 0 0 2 2 2 0 Ribosomal protein S17 Pkinase PF00069.25 ORF6246 - 2.8e-68 230.2 0.0 4.2e-68 229.6 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6246 - 2.7e-30 105.5 0.0 3.2e-29 102.0 0.0 2.1 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF6246 - 1.9e-05 24.1 0.0 3.7e-05 23.2 0.0 1.6 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 ORF6246 - 0.0022 17.4 0.2 0.0044 16.4 0.2 1.6 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF6246 - 0.0024 17.6 0.5 0.027 14.1 0.0 2.5 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF6246 - 0.19 10.5 0.1 0.19 10.5 0.1 1.8 2 0 0 2 2 2 0 Fungal protein kinase NusB PF01029.18 ORF43778 - 0.077 13.2 0.3 0.14 12.4 0.3 1.4 1 0 0 1 1 1 0 NusB family Herpes_LMP1 PF05297.11 ORF43778 - 0.99 8.5 6.1 1.7 7.8 6.1 1.3 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) NAD_binding_1 PF00175.21 ORF40444 - 5.7e-23 81.6 0.0 1.1e-22 80.7 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain UbiD PF01977.16 ORF40444 - 1.1e-17 64.0 3.1 1.3e-17 63.8 1.9 1.7 2 0 0 2 2 2 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FAD_binding_6 PF00970.24 ORF40444 - 3.5e-06 27.3 0.0 6e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF40444 - 0.22 11.6 0.0 0.38 10.9 0.0 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain DUF4148 PF13663.6 ORF37691 - 0.29 11.3 1.8 25 5.2 0.3 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) ERGIC_N PF13850.6 ORF36596 - 0.13 12.7 0.8 0.47 10.8 0.2 2.3 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TIC20 PF16166.5 ORF36596 - 2.7 7.8 4.9 0.73 9.6 0.8 2.0 2 0 0 2 2 2 0 Chloroplast import apparatus Tic20-like HMG_box PF00505.19 ORF35998 - 0.002 18.5 1.3 0.002 18.5 1.3 2.8 2 1 0 2 2 2 1 HMG (high mobility group) box Yae1_N PF09811.9 ORF35998 - 0.11 12.2 2.8 0.2 11.4 0.1 2.2 2 0 0 2 2 2 0 Essential protein Yae1, N terminal XG_FTase PF03254.13 ORF32178 - 0.13 10.8 0.0 0.2 10.2 0.0 1.2 1 0 0 1 1 1 0 Xyloglucan fucosyltransferase ABC_tran PF00005.27 ORF15872 - 1e-29 103.8 0.1 1.8e-29 103.0 0.1 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF15872 - 3.7e-07 30.1 1.9 5.9e-07 29.4 1.9 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF15872 - 1.6e-06 27.7 4.0 8.2e-05 22.1 1.6 2.4 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF15872 - 0.002 18.0 0.2 0.47 10.2 0.0 2.3 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 ORF15872 - 0.003 18.0 0.6 0.88 10.0 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 ORF15872 - 0.0049 16.9 0.6 0.012 15.6 0.5 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF87 PF01935.17 ORF15872 - 0.005 17.0 0.0 0.014 15.5 0.0 1.7 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_24 PF13479.6 ORF15872 - 0.0054 16.5 0.0 0.011 15.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 ORF15872 - 0.031 14.2 1.0 0.1 12.5 0.1 2.1 2 0 0 2 2 2 0 NTPase AAA_18 PF13238.6 ORF15872 - 0.035 14.6 0.0 0.065 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF15872 - 0.042 13.6 0.2 0.18 11.6 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF15872 - 0.051 13.9 0.2 0.2 11.9 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF15872 - 0.061 13.1 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MeaB PF03308.16 ORF15872 - 0.082 11.9 0.0 0.14 11.1 0.0 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB T2SSE PF00437.20 ORF15872 - 0.095 11.7 0.4 0.32 10.0 0.0 2.0 2 1 1 3 3 3 0 Type II/IV secretion system protein DDRGK PF09756.9 ORF15872 - 0.11 12.1 0.3 0.19 11.3 0.3 1.3 1 0 0 1 1 1 0 DDRGK domain AAA_16 PF13191.6 ORF15872 - 0.11 12.8 0.0 0.2 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 ORF15872 - 0.13 11.9 0.0 0.42 10.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF15872 - 0.14 12.6 1.4 0.42 11.1 1.4 1.7 1 1 0 1 1 1 0 AAA domain PPR_3 PF13812.6 ORF150969 - 3.3e-08 33.5 0.0 0.0009 19.3 0.0 3.8 5 0 0 5 5 5 2 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF150969 - 3.4e-07 29.8 0.0 0.0037 16.7 0.0 2.3 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_2 PF13041.6 ORF150969 - 5.2e-07 29.8 0.0 0.061 13.5 0.0 4.3 3 1 2 5 5 5 3 PPR repeat family Amidase_3 PF01520.18 ORF150969 - 0.014 15.5 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase PPR PF01535.20 ORF150969 - 0.019 15.2 5.9 9.1 6.8 0.0 4.6 5 0 0 5 5 5 0 PPR repeat Arrestin_N PF00339.29 ORF138567 - 4e-13 49.7 0.0 6.9e-13 48.9 0.0 1.4 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Glyco_transf_34 PF05637.12 ORF133836 - 5e-08 33.0 0.1 0.00022 21.0 0.0 2.2 1 1 1 2 2 2 2 galactosyl transferase GMA12/MNN10 family RRM_1 PF00076.22 ORF133836 - 0.0036 17.1 0.0 0.014 15.2 0.0 1.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2OG-FeII_Oxy_3 PF13640.6 ORF12662 - 9.7e-10 39.2 0.1 2.5e-09 37.9 0.0 1.7 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily DIOX_N PF14226.6 ORF11884 - 3.2e-24 85.9 0.0 4.7e-24 85.4 0.0 1.2 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal 2OG-FeII_Oxy PF03171.20 ORF11884 - 1.1e-20 74.0 0.0 2.7e-20 72.7 0.0 1.7 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily zf-C3HC4_3 PF13920.6 ORF117454 - 6.3e-07 29.2 11.0 1.5e-06 28.0 11.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF117454 - 2.2e-06 27.4 11.3 9.1e-05 22.2 12.2 2.7 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF117454 - 4.6e-06 26.9 13.7 1.4e-05 25.3 13.7 1.9 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF117454 - 6.3e-06 25.9 14.8 1.3e-05 24.9 14.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF117454 - 0.001 19.2 13.5 0.0041 17.2 13.6 2.1 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 ORF117454 - 0.0031 17.4 14.5 0.0084 16.0 14.5 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF117454 - 0.011 15.7 14.2 0.16 12.0 14.5 2.5 1 1 1 2 2 2 0 zinc-RING finger domain zf-rbx1 PF12678.7 ORF117454 - 0.012 15.9 10.3 0.042 14.1 10.3 2.0 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF117454 - 0.073 13.1 11.7 0.42 10.7 11.7 2.3 1 1 0 1 1 1 0 RING-type zinc-finger FYVE PF01363.21 ORF117454 - 0.32 11.1 11.4 0.87 9.8 11.4 1.7 1 0 0 1 1 1 0 FYVE zinc finger zf-B_box PF00643.24 ORF117454 - 1.5 9.1 12.4 0.16 12.2 7.2 2.0 2 0 0 2 2 2 0 B-box zinc finger Ank_2 PF12796.7 ORF113999 - 2.4e-30 104.9 0.3 2.9e-11 43.8 0.1 3.5 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF113999 - 1.1e-22 80.0 0.9 9.7e-08 32.4 0.0 4.3 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF113999 - 1e-20 73.5 1.5 3.9e-06 27.0 0.1 4.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF113999 - 1.1e-18 65.3 0.7 0.036 14.6 0.0 5.5 5 0 0 5 5 5 5 Ankyrin repeat Ank PF00023.30 ORF113999 - 1.3e-17 63.3 3.2 0.0027 18.1 0.0 5.4 5 0 0 5 5 5 4 Ankyrin repeat Melibiase_2 PF16499.5 ORF112028 - 1.1e-123 411.9 2.4 1.4e-123 411.6 2.4 1.1 1 0 0 1 1 1 1 Alpha galactosidase A Melibiase_C PF17801.1 ORF112028 - 8.3e-09 35.4 0.3 2.9e-08 33.7 0.0 2.0 2 0 0 2 2 2 1 Alpha galactosidase C-terminal beta sandwich domain Melibiase_2_C PF17450.2 ORF112028 - 1e-05 25.7 0.0 1.9e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Alpha galactosidase A C-terminal beta sandwich domain Melibiase PF02065.18 ORF112028 - 0.0038 16.2 0.0 0.007 15.4 0.0 1.3 1 0 0 1 1 1 1 Melibiase Glyco_hydro_97 PF10566.9 ORF112028 - 0.074 12.3 0.0 0.15 11.3 0.0 1.4 2 0 0 2 2 2 0 Glycoside hydrolase 97 Na_Ca_ex PF01699.24 ORF110293 - 6.7e-37 126.8 30.4 7.5e-22 77.9 13.7 2.2 2 0 0 2 2 2 2 Sodium/calcium exchanger protein DPM3 PF08285.11 ORF110293 - 0.04 14.1 0.1 0.04 14.1 0.1 2.3 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF485 PF04341.12 ORF110293 - 0.17 11.9 4.5 1.1 9.2 1.8 2.8 2 0 0 2 2 2 0 Protein of unknown function, DUF485 zf-U1 PF06220.12 ORF102910 - 5.9 6.7 11.1 0.094 12.5 1.8 2.7 3 0 0 3 3 3 0 U1 zinc finger PHD_4 PF16866.5 NODE_12939_length_1230_cov_1261.750628_g9022_i1forward_frame_3 - 0.016 15.3 1.0 0.035 14.2 1.0 1.5 1 0 0 1 1 1 0 PHD-finger WD40 PF00400.32 ORF9979 - 0.0047 17.7 0.0 0.44 11.5 0.0 3.4 3 1 0 3 3 3 1 WD domain, G-beta repeat CDP-OH_P_transf PF01066.21 ORF99433 - 1e-14 55.0 0.2 1e-14 55.0 0.2 3.4 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF4200 PF13863.6 ORF94955 - 0.0064 16.9 25.9 0.0064 16.9 25.9 4.9 2 2 2 4 4 4 1 Domain of unknown function (DUF4200) Pox_A_type_inc PF04508.12 ORF94955 - 0.011 15.6 8.5 1.5 8.8 0.0 4.9 5 0 0 5 5 5 0 Viral A-type inclusion protein repeat APC_N_CC PF16689.5 ORF94955 - 0.085 12.9 12.3 10 6.3 0.2 4.6 4 0 0 4 4 4 0 Coiled-coil N-terminus of APC, dimerisation domain Golgin_A5 PF09787.9 ORF94955 - 0.85 9.0 55.3 0.23 10.9 31.7 3.1 2 1 1 3 3 3 0 Golgin subfamily A member 5 Fez1 PF06818.15 ORF94955 - 4.1 7.8 60.5 1.8 9.0 18.3 3.5 1 1 3 4 4 4 0 Fez1 Fib_alpha PF08702.10 ORF94955 - 4.6 7.4 24.9 1.3 9.2 0.6 4.3 2 2 3 5 5 5 0 Fibrinogen alpha/beta chain family MAD PF05557.13 ORF94955 - 4.7 5.5 54.1 0.39 9.0 33.0 3.0 2 1 1 3 3 3 0 Mitotic checkpoint protein bZIP_1 PF00170.21 ORF94580 - 0.0011 19.0 3.9 0.0011 19.0 3.9 4.0 5 0 0 5 5 5 1 bZIP transcription factor Pil1 PF13805.6 ORF94580 - 0.0068 15.9 1.1 0.0068 15.9 1.1 2.6 2 1 0 2 2 2 1 Eisosome component PIL1 Sugarporin_N PF11471.8 ORF94580 - 0.033 14.1 0.0 0.065 13.2 0.0 1.5 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension bZIP_2 PF07716.15 ORF94580 - 0.034 14.2 3.1 0.034 14.2 3.1 3.5 3 0 0 3 3 3 0 Basic region leucine zipper TRAF_BIRC3_bd PF16673.5 ORF94580 - 0.046 13.5 2.2 0.15 11.9 0.4 2.7 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF4094 PF13334.6 ORF94580 - 0.78 10.2 6.6 0.13 12.7 1.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) FAD_binding_4 PF01565.23 ORF90172 - 3.9e-16 59.1 0.0 7e-16 58.2 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain ERGIC_N PF13850.6 ORF89341 - 0.048 14.0 1.4 0.14 12.5 0.3 2.3 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DDE_Tnp_1_assoc PF13808.6 ORF88538 - 5.6e-33 112.8 0.0 1.1e-32 111.8 0.0 1.6 1 0 0 1 1 1 1 DDE_Tnp_1-associated DDE_Tnp_1 PF01609.21 ORF88538 - 5.4e-29 101.4 1.0 6e-29 101.2 0.3 1.4 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_4 PF13701.6 ORF88538 - 0.0012 17.2 0.0 0.44 8.7 0.0 2.3 2 0 0 2 2 2 2 Transposase DDE domain group 1 GCV_T PF01571.21 ORF86711 - 8e-83 277.7 0.2 1e-82 277.4 0.2 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 ORF86711 - 2.9e-13 49.6 0.1 5.7e-13 48.6 0.1 1.4 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain POPLD PF08170.12 ORF86711 - 0.0018 18.6 0.0 0.0036 17.6 0.0 1.5 1 0 0 1 1 1 1 POPLD (NUC188) domain CHORD PF04968.12 ORF78052 - 0.0007 20.3 10.3 0.002 18.8 6.0 2.8 2 0 0 2 2 2 1 CHORD Iwr1 PF08574.10 ORF78052 - 2.1 9.4 6.2 26 5.9 0.1 3.2 3 0 0 3 3 3 0 Transcription factor Iwr1 bZIP_2 PF07716.15 ORF78052 - 2.4 8.3 8.5 3.4 7.8 3.4 2.9 2 0 0 2 2 2 0 Basic region leucine zipper ERGIC_N PF13850.6 ORF77098 - 0.08 13.3 0.2 0.22 11.9 0.2 1.8 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Arrestin_N PF00339.29 ORF75548 - 5.9e-13 49.1 0.1 1e-12 48.3 0.1 1.3 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Arrestin_C PF02752.22 ORF75548 - 2.2e-07 31.4 0.0 0.00052 20.5 0.0 2.3 2 0 0 2 2 2 2 Arrestin (or S-antigen), C-terminal domain zf-RING_2 PF13639.6 ORF70387 - 8.6e-09 35.6 5.4 8.6e-09 35.6 5.4 2.1 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF70387 - 6.3e-07 29.2 6.0 1.4e-06 28.0 6.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF70387 - 6.8e-07 29.0 4.4 1.6e-06 27.8 4.4 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF70387 - 2.3e-06 27.4 4.9 6.1e-06 26.1 4.9 1.8 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF70387 - 3.4e-06 26.8 4.4 7.9e-06 25.6 4.4 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF70387 - 1.3e-05 25.0 4.6 3.1e-05 23.7 4.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF70387 - 3.4e-05 23.4 2.8 3.4e-05 23.4 2.8 1.8 2 0 0 2 2 1 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF70387 - 0.00012 21.8 3.7 0.00031 20.4 3.7 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF70387 - 0.00027 21.1 7.0 0.00027 21.1 7.0 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF70387 - 0.00041 20.3 4.2 0.0012 18.8 4.2 1.8 1 0 0 1 1 1 1 RING-type zinc-finger Rtf2 PF04641.12 ORF70387 - 0.00057 19.3 0.4 0.00076 18.9 0.4 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-ANAPC11 PF12861.7 ORF70387 - 0.0089 16.1 1.0 0.0089 16.1 1.0 1.8 2 0 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-UDP PF14569.6 ORF70387 - 0.061 13.4 1.8 0.16 12.1 1.8 1.6 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-RING_9 PF13901.6 ORF70387 - 0.1 12.6 3.0 0.16 12.0 3.0 1.3 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon C1_1 PF00130.22 ORF70387 - 0.18 11.7 3.2 0.097 12.6 0.8 1.8 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Vps39_2 PF10367.9 ORF70387 - 0.24 11.9 3.5 0.16 12.4 0.4 2.2 3 0 0 3 3 3 0 Vacuolar sorting protein 39 domain 2 7tm_1 PF00001.21 ORF70387 - 0.32 10.3 10.7 2.1 7.6 10.7 2.1 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) DUF4834 PF16118.5 ORF70387 - 0.67 10.9 0.0 0.67 10.9 0.0 3.2 4 0 0 4 4 3 0 Domain of unknown function (DUF4834) zf-RING-like PF08746.11 ORF70387 - 1.4 9.3 9.4 0.13 12.6 4.2 2.1 2 1 0 2 2 2 0 RING-like domain Sugar_tr PF00083.24 ORF67273 - 1.6e-21 76.7 16.9 1.9e-21 76.4 16.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF67273 - 3.4e-16 59.1 30.6 3.4e-16 59.1 30.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Cation_ATPase_C PF00689.21 ORF67273 - 0.58 9.8 16.0 0.096 12.4 0.9 3.6 3 1 0 3 3 3 0 Cation transporting ATPase, C-terminus DUF2304 PF10066.9 ORF67273 - 5.7 7.2 8.6 8.7 6.6 3.7 3.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2304) NIF PF03031.18 ORF57796 - 9.1e-20 71.0 0.8 2.3e-19 69.7 0.1 2.0 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase Hydrolase PF00702.26 ORF57796 - 0.0019 18.5 0.0 0.0039 17.5 0.0 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase 5_nucleotid PF05761.14 ORF57796 - 0.0061 15.5 0.1 0.0061 15.5 0.1 2.0 3 0 0 3 3 3 1 5' nucleotidase family HAD_2 PF13419.6 ORF57796 - 0.02 15.0 0.7 0.02 15.0 0.7 1.9 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase DDE_Tnp_1_assoc PF13808.6 ORF45042 - 5.6e-33 112.8 0.0 1.1e-32 111.8 0.0 1.6 1 0 0 1 1 1 1 DDE_Tnp_1-associated DDE_Tnp_1 PF01609.21 ORF45042 - 5.4e-29 101.4 1.0 6e-29 101.2 0.3 1.4 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1_4 PF13701.6 ORF45042 - 0.0012 17.2 0.0 0.44 8.7 0.0 2.3 2 0 0 2 2 2 2 Transposase DDE domain group 1 APS_kinase PF01583.20 ORF44715 - 0.18 11.7 0.1 0.3 11.0 0.1 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase Jacalin PF01419.17 ORF36801 - 0.0024 17.8 0.2 9.1 6.2 0.0 4.0 4 0 0 4 4 4 2 Jacalin-like lectin domain Kelch_1 PF01344.25 ORF36801 - 0.079 12.6 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 Kelch motif Pkinase PF00069.25 ORF36266 - 7.7e-68 228.7 0.0 1.1e-67 228.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF36266 - 9.6e-31 107.0 0.0 1.5e-29 103.1 0.0 2.1 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF36266 - 1.5e-05 24.5 0.0 3.4e-05 23.3 0.0 1.6 1 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF36266 - 0.0024 17.3 0.2 0.0046 16.3 0.2 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF36266 - 0.0043 16.7 0.4 0.059 13.0 0.0 2.5 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Pkinase PF00069.25 ORF152878 - 7.7e-68 228.7 0.0 1.1e-67 228.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF152878 - 9.6e-31 107.0 0.0 1.5e-29 103.1 0.0 2.1 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF152878 - 1.5e-05 24.5 0.0 3.4e-05 23.3 0.0 1.6 1 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF152878 - 0.0024 17.3 0.2 0.0046 16.3 0.2 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF152878 - 0.0043 16.7 0.4 0.059 13.0 0.0 2.5 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Jacalin PF01419.17 ORF105475 - 0.0024 17.8 0.2 9.1 6.2 0.0 4.0 4 0 0 4 4 4 2 Jacalin-like lectin domain Kelch_1 PF01344.25 ORF105475 - 0.079 12.6 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 Kelch motif Asp PF00026.23 ORF91617 - 6.1e-45 154.0 6.2 8.1e-45 153.6 6.2 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF91617 - 2.5e-09 37.6 0.1 0.00044 20.5 0.0 2.6 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal N_methyl PF07963.12 ORF7827 - 9.2e-09 34.5 0.6 1.6e-08 33.7 0.6 1.4 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif TTL PF03133.15 ORF76627 - 3.8e-64 216.7 3.8 5.3e-64 216.2 3.8 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF76627 - 1.2e-08 34.6 0.2 4.5e-06 26.1 0.1 3.1 2 1 1 3 3 3 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF76627 - 8.4e-08 31.8 0.0 0.0002 20.7 0.1 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 ORF76627 - 2.5e-05 24.4 0.0 0.0014 18.7 0.0 2.5 2 1 0 2 2 2 1 ATP-grasp domain RimK PF08443.11 ORF76627 - 0.013 15.1 0.1 0.051 13.2 0.0 1.9 3 0 0 3 3 3 0 RimK-like ATP-grasp domain DUF3336 PF11815.8 ORF76627 - 0.12 12.1 0.7 1.5 8.5 0.4 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF3336) zf-BED PF02892.15 ORF76627 - 3.6 7.7 5.5 9.3 6.4 2.6 2.7 2 1 0 2 2 2 0 BED zinc finger GGDEF PF00990.21 ORF76266 - 4.4e-45 153.3 0.4 6.9e-45 152.7 0.4 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain CHASE8 PF17152.4 ORF76266 - 1.6e-30 105.3 0.0 4.4e-30 103.9 0.0 1.8 1 0 0 1 1 1 1 Periplasmic sensor domain Med29 PF11568.8 ORF76266 - 0.0092 16.2 0.0 0.017 15.3 0.0 1.4 1 0 0 1 1 1 1 Mediator complex subunit 29 LapD_MoxY_N PF16448.5 ORF76266 - 0.024 14.5 0.4 0.054 13.4 0.1 1.8 2 0 0 2 2 2 0 LapD/MoxY periplasmic domain RPE65 PF03055.15 ORF7382 - 4e-81 273.6 0.0 4.8e-81 273.3 0.0 1.0 1 0 0 1 1 1 1 Retinal pigment epithelial membrane protein AA_permease PF00324.21 ORF73706 - 2.3e-108 362.8 37.8 2.6e-108 362.7 37.8 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF73706 - 7.2e-42 143.7 42.4 8.6e-42 143.4 42.4 1.1 1 0 0 1 1 1 1 Amino acid permease HATPase_c PF02518.26 ORF71584 - 8.7e-21 74.5 0.9 3e-20 72.8 0.1 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YfhO PF09586.10 ORF71584 - 0.025 12.8 2.9 0.033 12.4 2.9 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO SHMT PF00464.19 ORF66607 - 2.2e-176 586.4 0.0 2.5e-176 586.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 ORF66607 - 0.0016 17.8 0.0 0.0027 17.0 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase Rieske_2 PF13806.6 ORF65462 - 2.5e-13 49.8 0.0 2e-12 46.9 0.0 2.1 1 1 0 1 1 1 1 Rieske-like [2Fe-2S] domain Rieske PF00355.26 ORF65462 - 2.7e-13 49.6 0.0 7e-13 48.3 0.0 1.7 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain ERGIC_N PF13850.6 ORF64525 - 0.1 13.0 0.2 0.3 11.5 0.2 1.8 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TTL PF03133.15 ORF60659 - 3.8e-64 216.7 3.8 5.3e-64 216.2 3.8 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF60659 - 1.2e-08 34.6 0.2 4.5e-06 26.1 0.1 3.1 2 1 1 3 3 3 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF60659 - 8.4e-08 31.8 0.0 0.0002 20.7 0.1 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 ORF60659 - 2.5e-05 24.4 0.0 0.0014 18.7 0.0 2.5 2 1 0 2 2 2 1 ATP-grasp domain RimK PF08443.11 ORF60659 - 0.013 15.1 0.1 0.051 13.2 0.0 1.9 3 0 0 3 3 3 0 RimK-like ATP-grasp domain DUF3336 PF11815.8 ORF60659 - 0.12 12.1 0.7 1.5 8.5 0.4 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF3336) zf-BED PF02892.15 ORF60659 - 3.6 7.7 5.5 9.3 6.4 2.6 2.7 2 1 0 2 2 2 0 BED zinc finger ERGIC_N PF13850.6 ORF55781 - 0.088 13.2 0.4 0.45 10.9 0.1 2.2 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Defensin_RK-1 PF17860.1 ORF55781 - 6.5 7.3 5.7 0.38 11.3 0.3 1.8 2 0 0 2 2 2 0 RK-1-like defensin FdhE PF04216.12 ORF50009 - 3.3e-117 391.5 0.4 3.9e-117 391.2 0.4 1.0 1 0 0 1 1 1 1 Protein involved in formate dehydrogenase formation DZR PF12773.7 ORF50009 - 0.027 14.5 7.1 0.59 10.2 2.9 2.9 1 1 1 2 2 2 0 Double zinc ribbon Elf1 PF05129.13 ORF50009 - 0.22 11.6 4.1 2 8.5 1.4 2.7 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zf-ribbon_3 PF13248.6 ORF50009 - 0.42 10.1 0.1 0.42 10.1 0.1 3.6 4 0 0 4 4 4 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF50009 - 0.53 10.3 5.4 0.92 9.5 0.3 2.6 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_15 PF17032.5 ORF50009 - 0.76 10.6 5.1 1.8 9.4 5.1 1.7 1 1 0 1 1 1 0 zinc-ribbon family zf-IS66 PF13005.7 ORF50009 - 1.1 9.7 7.0 11 6.5 3.9 2.9 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zinc_ribbon_6 PF14599.6 ORF50009 - 1.3 9.1 5.3 1.3 9.1 1.7 2.6 2 0 0 2 2 2 0 Zinc-ribbon DnaJ_CXXCXGXG PF00684.19 ORF50009 - 2.9 8.3 8.1 0.76 10.2 3.8 2.0 1 1 1 2 2 2 0 DnaJ central domain HypA PF01155.19 ORF50009 - 3.3 7.8 8.0 6.9 6.7 4.2 2.6 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-met PF12874.7 ORF48958 - 1.5e-12 47.5 8.1 1.7e-10 40.9 5.3 2.5 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF48958 - 6.5e-11 42.2 10.5 2.4e-10 40.4 7.4 2.6 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_2 PF12756.7 ORF48958 - 2.3e-09 37.5 5.9 0.00054 20.3 1.4 3.3 3 0 0 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 ORF48958 - 1.4e-08 34.9 4.3 0.0012 19.5 1.1 3.1 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF48958 - 9e-08 32.2 5.7 0.0038 17.6 2.1 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-DBF PF07535.12 ORF48958 - 0.00014 21.9 3.8 0.00015 21.8 1.6 2.1 2 0 0 2 2 2 1 DBF zinc finger zf-C2H2_6 PF13912.6 ORF48958 - 0.0015 18.5 9.0 0.014 15.4 3.9 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-U1 PF06220.12 ORF48958 - 0.011 15.5 0.5 0.028 14.2 0.5 1.6 1 0 0 1 1 1 0 U1 zinc finger zf-BED PF02892.15 ORF48958 - 0.073 13.1 0.5 9.7 6.3 0.3 2.4 2 0 0 2 2 2 0 BED zinc finger SAS4 PF15460.6 ORF46600 - 0.021 14.9 4.4 0.57 10.3 0.6 2.7 2 0 0 2 2 2 0 Something about silencing, SAS, complex subunit 4 SHMT PF00464.19 ORF45495 - 2.2e-176 586.4 0.0 2.5e-176 586.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 ORF45495 - 0.0016 17.8 0.0 0.0027 17.0 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase PMT PF02366.18 ORF40672 - 4.9e-19 68.9 9.0 4.9e-19 68.9 9.0 3.2 4 0 0 4 4 4 1 Dolichyl-phosphate-mannose-protein mannosyltransferase SHMT PF00464.19 ORF38031 - 2.2e-176 586.4 0.0 2.5e-176 586.2 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 ORF38031 - 0.0016 17.8 0.0 0.0027 17.0 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase GLE1 PF07817.13 ORF37066 - 0.038 13.2 3.2 0.06 12.5 3.2 1.3 1 0 0 1 1 1 0 GLE1-like protein MFS_1 PF07690.16 ORF26769 - 3.2e-13 49.3 39.2 4.3e-13 48.9 39.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1435 PF07256.12 ORF26769 - 0.015 15.3 2.9 0.043 13.9 1.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1435) ERGIC_N PF13850.6 ORF145321 - 0.11 12.9 0.2 0.3 11.5 0.2 1.8 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) zf-CCCH PF00642.24 ORF143150 - 3.1e-09 36.5 3.7 7.5e-09 35.3 3.7 1.7 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF143150 - 6.6e-06 26.0 5.3 1.7e-05 24.7 5.3 1.7 1 0 0 1 1 1 1 Zinc finger domain zf-RING_5 PF14634.6 ORF143150 - 0.00058 19.8 10.2 0.0012 18.7 10.2 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-CCCH_4 PF18044.1 ORF143150 - 0.0011 18.7 3.4 0.0011 18.7 3.4 2.2 2 0 0 2 2 2 1 CCCH-type zinc finger zf-C3HC4_3 PF13920.6 ORF143150 - 0.0018 18.1 7.8 0.0045 16.8 7.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-CCCH_2 PF14608.6 ORF143150 - 0.012 16.1 2.3 0.026 15.0 2.3 1.6 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger zf-RING_2 PF13639.6 ORF143150 - 0.013 15.9 10.1 0.033 14.5 10.1 1.8 1 0 0 1 1 1 0 Ring finger domain zf-C3HC4_2 PF13923.6 ORF143150 - 0.028 14.2 8.8 0.11 12.3 8.8 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF143150 - 0.035 14.1 7.0 0.092 12.8 7.0 1.7 1 0 0 1 1 1 0 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF143150 - 0.42 10.5 8.2 1.6 8.7 8.3 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF143150 - 1.5 9.0 8.3 0.21 11.8 3.0 2.3 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-P11 PF03854.14 ORF143150 - 2.1 8.1 5.2 4.7 6.9 5.2 1.5 1 0 0 1 1 1 0 P-11 zinc finger Choline_transpo PF04515.12 ORF140196 - 5.1e-59 200.1 14.6 5.1e-59 200.1 14.6 1.4 2 0 0 2 2 2 1 Plasma-membrane choline transporter PTR2 PF00854.21 ORF137389 - 3.5e-94 315.9 13.1 4.3e-94 315.6 13.1 1.0 1 0 0 1 1 1 1 POT family MFS_1 PF07690.16 ORF137389 - 8.8e-08 31.4 34.9 8.8e-08 31.4 34.9 2.4 2 1 0 2 2 2 1 Major Facilitator Superfamily Tmemb_14 PF03647.13 ORF137389 - 0.035 14.8 1.0 0.035 14.8 1.0 4.0 4 3 0 4 4 4 0 Transmembrane proteins 14C DUF3094 PF11293.8 ORF137389 - 0.27 11.0 0.9 1.2 9.0 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) DUF3290 PF11694.8 ORF137389 - 0.93 9.5 2.7 0.59 10.1 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) DUF2070 PF09843.9 ORF137389 - 7.2 4.8 11.9 5.2 5.2 10.3 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) TssN PF17555.2 ORF137389 - 8.3 5.7 10.5 0.22 10.9 4.0 1.8 2 0 0 2 2 2 0 Type VI secretion system, TssN Mpv17_PMP22 PF04117.12 ORF129829 - 4e-13 49.4 1.4 9.1e-13 48.2 1.4 1.7 1 0 0 1 1 1 1 Mpv17 / PMP22 family Aldedh PF00171.22 ORF123029 - 6.2e-157 522.8 0.0 7e-157 522.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Methyltransf_24 PF13578.6 ORF122484 - 4.4e-07 30.9 0.0 8.9e-07 29.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF122484 - 0.13 11.4 0.0 0.19 10.9 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase LAP1C PF05609.12 ORF119137 - 0.43 9.6 28.0 0.64 9.0 28.0 1.3 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) SOBP PF15279.6 ORF119137 - 1.3 9.5 15.4 0.34 11.5 11.3 1.9 2 0 0 2 2 2 0 Sine oculis-binding protein Peptidase_S49 PF01343.18 ORF117603 - 7e-06 26.1 0.0 1.7e-05 24.8 0.0 1.5 2 0 0 2 2 2 1 Peptidase family S49 U-box PF04564.15 ORF114321 - 3.8e-14 52.6 0.0 7.4e-14 51.7 0.0 1.4 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF114321 - 0.0047 17.0 0.0 0.0092 16.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein zf-Nse PF11789.8 ORF114321 - 0.04 13.8 0.0 0.083 12.7 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Aldedh PF00171.22 ORF112427 - 6.2e-157 522.8 0.0 7e-157 522.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ORC5_C PF14630.6 ORF93669 - 8.9e-10 38.5 0.2 1.5e-09 37.8 0.2 1.4 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 5 C-terminus Phage_integrase PF00589.22 ORF93006 - 0.0067 16.2 0.1 0.023 14.5 0.1 1.8 1 1 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 ORF93006 - 0.081 13.2 0.3 0.45 10.9 0.0 2.3 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 ORF93006 - 0.14 12.6 0.1 0.56 10.7 0.0 2.0 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain TTL PF03133.15 ORF68942 - 1.3e-98 329.8 0.8 1.8e-98 329.3 0.8 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF68942 - 5.3e-07 29.2 0.0 0.00023 20.5 0.0 2.5 2 1 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF68942 - 0.00041 19.7 0.0 0.0042 16.4 0.0 2.4 3 0 0 3 3 3 1 Sugar-transfer associated ATP-grasp PSS PF03034.15 ORF60472 - 1.1e-57 195.9 12.1 5.7e-56 190.3 12.1 2.2 1 1 0 1 1 1 1 Phosphatidyl serine synthase AAA_2 PF07724.14 ORF57452 - 4.8e-21 75.6 0.1 1.4e-20 74.1 0.0 1.8 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF57452 - 6.9e-21 74.1 0.1 1.4e-20 73.2 0.1 1.5 1 0 0 1 1 1 1 AAA lid domain ClpB_D2-small PF10431.9 ORF57452 - 2.6e-20 72.2 0.0 9.7e-20 70.4 0.0 2.0 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 ORF57452 - 3.1e-07 30.9 0.0 1.4e-06 28.7 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF2283 PF10049.9 ORF57452 - 0.012 15.8 4.5 2.2 8.6 0.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2283) TniB PF05621.11 ORF57452 - 0.014 14.8 0.0 0.028 13.8 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein zf-C3HC4_3 PF13920.6 ORF567 - 1.5e-14 53.6 10.9 3e-14 52.6 10.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF567 - 8.4e-10 38.4 11.1 2.1e-09 37.1 11.1 1.7 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF567 - 3.1e-06 27.4 11.5 6.6e-06 26.4 11.5 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF567 - 6.2e-06 26.0 13.4 1.6e-05 24.6 13.4 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF567 - 0.00089 19.1 12.8 0.0017 18.1 12.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) VERL PF11386.8 ORF567 - 0.0045 17.1 0.1 0.0099 16.0 0.1 1.5 1 0 0 1 1 1 1 Vitelline envelope receptor for lysin zf-RING_5 PF14634.6 ORF567 - 0.011 15.6 11.0 0.026 14.5 11.0 1.6 1 0 0 1 1 1 0 zinc-RING finger domain Peptidase_C62 PF12380.8 ORF567 - 0.012 14.7 0.1 0.019 14.1 0.1 1.2 1 0 0 1 1 1 0 Gill-associated viral 3C-like peptidase DUF4980 PF16352.5 ORF567 - 0.037 14.0 1.2 0.24 11.4 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4980) zf-RING_UBOX PF13445.6 ORF567 - 0.7 10.0 8.0 0.93 9.6 5.0 2.5 1 1 1 2 2 2 0 RING-type zinc-finger zf-RING_4 PF14570.6 ORF567 - 1.7 8.5 11.4 13 5.7 11.4 2.5 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain PAN_1 PF00024.26 ORF52044 - 4.3e-19 68.2 20.0 6.5e-07 29.2 2.7 3.3 3 0 0 3 3 3 3 PAN domain PAN_4 PF14295.6 ORF52044 - 1.5e-13 50.4 18.1 6.5e-06 26.0 1.8 3.6 3 0 0 3 3 3 3 PAN domain PAN_2 PF08276.11 ORF52044 - 0.0058 16.7 16.6 0.27 11.4 0.8 3.7 3 0 0 3 3 3 3 PAN-like domain MANEC PF07502.14 ORF52044 - 0.063 13.6 12.6 1.2 9.5 0.4 3.6 3 0 0 3 3 3 0 MANEC domain Pkinase PF00069.25 ORF51306 - 7.6e-72 241.8 0.0 1.3e-71 241.1 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF51306 - 1.3e-36 126.2 0.0 1.9e-36 125.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_C PF00433.24 ORF51306 - 0.00088 19.9 1.7 0.002 18.8 1.7 1.6 1 0 0 1 1 1 1 Protein kinase C terminal domain FHA PF00498.26 ORF48791 - 3.5e-08 33.7 0.1 1.1e-07 32.1 0.1 1.9 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF48791 - 3.6e-05 24.0 0.0 0.00011 22.4 0.0 1.8 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FlgI PF02119.16 ORF48791 - 0.26 10.2 3.0 0.33 9.8 0.2 2.1 1 1 0 2 2 2 0 Flagellar P-ring protein YqfQ PF14181.6 ORF48791 - 8.8 6.5 14.8 0.17 12.1 2.3 2.8 3 0 0 3 3 3 0 YqfQ-like protein DUF4695 PF15766.5 ORF42534 - 4.2 7.6 15.7 0.35 11.1 9.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4695) ALG3 PF05208.13 ORF40569 - 5.3e-126 420.8 27.4 6.2e-126 420.6 27.4 1.0 1 0 0 1 1 1 1 ALG3 protein UPF0370 PF13980.6 ORF40569 - 0.1 12.6 2.4 0.63 10.1 0.9 2.9 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0370) GRDP-like PF07173.12 ORF40377 - 0.00043 20.9 11.6 0.0036 18.0 1.4 2.9 2 1 1 3 3 3 2 Glycine-rich domain-containing protein-like Ras_bdg_2 PF14847.6 ORF40377 - 2.2 8.7 7.0 4.4 7.7 0.4 3.1 3 0 0 3 3 3 0 Ras-binding domain of Byr2 DUF229 PF02995.17 ORF35200 - 9e-30 103.7 10.5 2.1e-28 99.2 10.5 2.6 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF35200 - 1.1e-06 28.2 2.9 3.5e-06 26.7 2.8 1.5 1 1 0 1 1 1 1 Sulfatase DUF3232 PF11554.8 ORF35200 - 0.033 14.6 0.2 0.063 13.7 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) WD40 PF00400.32 ORF33283 - 1.5e-14 54.1 22.0 0.00022 22.0 0.1 7.1 8 0 0 8 8 8 3 WD domain, G-beta repeat Nup160 PF11715.8 ORF33283 - 8.2e-07 28.0 8.3 0.043 12.5 1.1 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 ZapB PF06005.12 ORF33283 - 0.21 12.1 0.2 0.33 11.4 0.2 1.2 1 0 0 1 1 1 0 Cell division protein ZapB DUF4618 PF15397.6 ORF33283 - 0.24 10.8 0.0 0.35 10.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Ge1_WD40 PF16529.5 ORF33283 - 0.27 10.2 5.3 1.3 7.9 1.3 2.9 2 1 1 3 3 3 0 WD40 region of Ge1, enhancer of mRNA-decapping protein PALB2_WD40 PF16756.5 ORF33283 - 0.93 8.3 9.3 2.2 7.1 0.2 4.4 2 2 4 6 6 6 0 Partner and localizer of BRCA2 WD40 domain DUF547 PF04784.14 ORF31690 - 4.3e-17 62.3 0.0 2.1e-16 60.1 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function, DUF547 Metal_resist PF13801.6 ORF31690 - 0.039 14.1 0.4 16 5.7 0.0 2.9 2 0 0 2 2 2 0 Heavy-metal resistance Cyclin_N PF00134.23 ORF30799 - 0.0044 16.8 4.5 0.028 14.2 0.1 3.3 3 1 0 3 3 3 1 Cyclin, N-terminal domain FidL_like PF15941.5 ORF30799 - 1.7 9.2 5.5 7.5 7.1 0.2 3.4 3 1 0 3 3 3 0 FidL-like putative membrane protein Amidase PF01425.21 ORF28601 - 0.21 10.5 0.4 0.32 9.9 0.4 1.2 1 0 0 1 1 1 0 Amidase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks34.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks34.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks34.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks34.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:23:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TPR_12 PF13424.6 NODE_67904_length_234_cov_1.070352_g59963_i0reverse_frame_3 - 0.017 15.4 0.3 0.14 12.4 0.3 1.9 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_67904_length_234_cov_1.070352_g59963_i0reverse_frame_3 - 0.18 12.0 3.5 4.7 7.6 0.0 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat Hit1_C PF18268.1 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_3 - 0.019 15.1 0.0 0.02 15.1 0.0 1.2 1 0 0 1 1 1 0 Hit1 C-terminal DUF4156 PF13698.6 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_3 - 0.11 12.9 0.2 0.12 12.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) DUF728 PF05304.12 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_3 - 0.12 12.2 2.3 0.15 11.9 2.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF728) DDE_Tnp_1_2 PF13586.6 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_2 - 0.038 14.4 1.0 0.046 14.1 1.0 1.1 1 0 0 1 1 1 0 Transposase DDE domain AP_endonuc_2 PF01261.24 NODE_67903_length_234_cov_1.105528_g59962_i0forward_frame_2 - 0.15 11.5 0.3 0.17 11.3 0.3 1.1 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Defensin_beta PF00711.19 NODE_67902_length_234_cov_1.110553_g59961_i0reverse_frame_2 - 0.034 14.2 3.0 1.4 9.0 1.3 2.2 2 0 0 2 2 2 0 Beta defensin MadM PF03818.13 NODE_67902_length_234_cov_1.110553_g59961_i0forward_frame_3 - 0.15 12.0 0.1 0.25 11.2 0.1 1.3 1 0 0 1 1 1 0 Malonate/sodium symporter MadM subunit DUF4217 PF13959.6 NODE_67901_length_234_cov_1.135678_g59960_i0reverse_frame_2 - 5.8e-18 64.9 0.1 7e-18 64.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) zf-C2H2_11 PF16622.5 NODE_67901_length_234_cov_1.135678_g59960_i0forward_frame_3 - 0.038 13.8 1.1 0.071 12.9 1.1 1.5 1 0 0 1 1 1 0 zinc-finger C2H2-type TRP PF06011.12 NODE_67900_length_234_cov_1.140704_g59959_i0forward_frame_2 - 0.17 10.6 2.5 0.2 10.4 2.5 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF4116 PF13475.6 NODE_67899_length_234_cov_1.165829_g59958_i0reverse_frame_3 - 0.16 11.7 0.0 0.28 11.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) DUF4733 PF15878.5 NODE_67899_length_234_cov_1.165829_g59958_i0forward_frame_2 - 0.027 15.0 0.0 0.028 14.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4733) PRIMA1 PF16101.5 NODE_67895_length_234_cov_1.175879_g59954_i0reverse_frame_2 - 9.3 6.3 10.1 11 6.1 10.1 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 MetJ PF01340.20 NODE_67894_length_234_cov_1.190955_g59953_i0reverse_frame_3 - 0.068 13.2 0.0 0.083 12.9 0.0 1.1 1 0 0 1 1 1 0 Met Apo-repressor, MetJ DUF1281_C PF18406.1 NODE_67894_length_234_cov_1.190955_g59953_i0reverse_frame_3 - 0.095 12.4 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein LRR_4 PF12799.7 NODE_67893_length_234_cov_1.195980_g59952_i0forward_frame_3 - 9.8e-05 22.6 0.0 0.088 13.3 0.0 2.2 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_67893_length_234_cov_1.195980_g59952_i0forward_frame_3 - 0.00058 20.1 0.2 0.15 12.7 0.1 2.6 2 1 0 2 2 2 2 Leucine Rich Repeat GARS_A PF01071.19 NODE_67892_length_234_cov_1.201005_g59951_i0forward_frame_2 - 1.1e-17 64.4 0.0 1.2e-17 64.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SH3BGR PF04908.15 NODE_67890_length_234_cov_1.201005_g59949_i0forward_frame_3 - 0.064 13.4 0.0 0.068 13.3 0.0 1.1 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein Perm-CXXC PF15629.6 NODE_67888_length_234_cov_1.206030_g59947_i0forward_frame_3 - 0.03 14.6 1.8 0.045 14.0 1.8 1.3 1 0 0 1 1 1 0 Permuted single zf-CXXC unit MCM_OB PF17207.3 NODE_67885_length_234_cov_1.206030_g59944_i0reverse_frame_2 - 7.9e-26 90.4 1.2 8.5e-26 90.3 1.2 1.0 1 0 0 1 1 1 1 MCM OB domain EF1G PF00647.19 NODE_67879_length_234_cov_1.226131_g59938_i0reverse_frame_3 - 0.06 13.4 0.9 0.07 13.2 0.9 1.1 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain Synaptobrevin PF00957.21 NODE_67875_length_234_cov_1.276382_g59934_i0forward_frame_3 - 0.59 10.0 4.6 0.85 9.5 4.6 1.3 1 0 0 1 1 1 0 Synaptobrevin UPF0242 PF06785.11 NODE_67874_length_234_cov_1.281407_g59933_i0reverse_frame_3 - 0.062 13.4 2.1 0.063 13.4 2.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5409 PF17421.2 NODE_67868_length_234_cov_1.341709_g59927_i0reverse_frame_2 - 0.041 14.6 0.0 0.05 14.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Ubiquitin_4 PF18036.1 NODE_67867_length_234_cov_1.346734_g59926_i0forward_frame_3 - 0.049 13.7 0.3 0.049 13.7 0.3 1.2 1 0 0 1 1 1 0 Ubiquitin-like domain MipZ PF09140.11 NODE_67867_length_234_cov_1.346734_g59926_i0forward_frame_2 - 0.061 12.6 0.1 0.066 12.5 0.1 1.0 1 0 0 1 1 1 0 ATPase MipZ SAB PF04382.13 NODE_67867_length_234_cov_1.346734_g59926_i0forward_frame_2 - 0.1 12.7 0.1 0.18 11.9 0.1 1.5 1 1 0 1 1 1 0 SAB domain PknG_TPR PF16918.5 NODE_67867_length_234_cov_1.346734_g59926_i0forward_frame_2 - 0.16 10.7 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat RapA_C PF12137.8 NODE_67865_length_234_cov_1.371859_g59924_i0forward_frame_2 - 0.018 14.0 0.8 0.02 13.9 0.8 1.0 1 0 0 1 1 1 0 RNA polymerase recycling family C-terminal Peptidase_S11 PF00768.20 NODE_67864_length_234_cov_1.386935_g59923_i0forward_frame_2 - 3.5e-10 39.7 0.1 4.5e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase US30 PF17624.2 NODE_67862_length_234_cov_1.396985_g59921_i0forward_frame_2 - 0.11 11.6 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function DUF2880 PF11082.8 NODE_67861_length_234_cov_1.396985_g59920_i0forward_frame_2 - 0.15 12.4 0.0 0.22 11.8 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2880) PHM7_cyt PF14703.6 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 5.4e-06 26.8 0.3 6.5e-06 26.5 0.3 1.0 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter RRM_1 PF00076.22 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 0.0057 16.4 0.1 0.0071 16.1 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 0.0092 16.0 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 Limkain b1 SET_assoc PF11767.8 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 0.056 13.1 0.1 0.072 12.7 0.1 1.4 1 1 0 1 1 1 0 Histone lysine methyltransferase SET associated LEA_4 PF02987.16 NODE_67854_length_234_cov_1.432161_g59913_i0forward_frame_3 - 0.078 13.1 2.7 0.19 11.9 1.3 2.2 2 1 0 2 2 2 0 Late embryogenesis abundant protein Rap_GAP PF02145.15 NODE_67850_length_234_cov_1.472362_g59909_i0reverse_frame_2 - 0.02 14.4 0.1 0.022 14.3 0.1 1.0 1 0 0 1 1 1 0 Rap/ran-GAP UvrD_C PF13361.6 NODE_67850_length_234_cov_1.472362_g59909_i0reverse_frame_2 - 0.05 13.0 0.1 0.051 12.9 0.1 1.0 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain DUF3989 PF13150.6 NODE_67850_length_234_cov_1.472362_g59909_i0forward_frame_3 - 0.0055 16.4 1.0 0.0088 15.8 1.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3989) DUF5090 PF17009.5 NODE_67850_length_234_cov_1.472362_g59909_i0forward_frame_2 - 0.019 14.9 6.1 0.023 14.7 6.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Porin_10 PF14121.6 NODE_67848_length_234_cov_1.492462_g59907_i0forward_frame_2 - 0.036 12.6 0.1 0.039 12.5 0.1 1.1 1 0 0 1 1 1 0 Putative porin DUF1158 PF06643.11 NODE_67843_length_234_cov_1.532663_g59902_i0forward_frame_3 - 0.68 10.5 3.9 0.23 12.0 1.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1158) Pkinase PF00069.25 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 1.4e-23 83.6 0.1 1.5e-23 83.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 3.4e-13 49.5 0.0 3.9e-13 49.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 0.00024 20.0 0.2 0.00032 19.6 0.2 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 0.061 12.6 0.0 0.092 12.0 0.0 1.3 1 1 0 1 1 1 0 Kinase-like Kdo PF06293.14 NODE_67838_length_234_cov_1.587940_g59897_i0forward_frame_3 - 0.071 12.5 0.2 0.087 12.2 0.2 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family L_biotic_typeA PF04604.13 NODE_67836_length_234_cov_1.587940_g59895_i0reverse_frame_3 - 0.11 12.3 0.2 0.22 11.4 0.2 1.5 1 0 0 1 1 1 0 Type-A lantibiotic Radial_spoke PF04712.12 NODE_67836_length_234_cov_1.587940_g59895_i0forward_frame_2 - 0.021 13.8 0.0 0.022 13.7 0.0 1.1 1 0 0 1 1 1 0 Radial spokehead-like protein CD225 PF04505.12 NODE_67835_length_234_cov_1.592965_g59894_i0forward_frame_2 - 2.9 8.1 7.0 13 6.0 0.7 2.2 2 0 0 2 2 2 0 Interferon-induced transmembrane protein Abhydrolase_8 PF06259.12 NODE_67834_length_234_cov_1.603015_g59893_i0forward_frame_2 - 0.018 14.7 0.1 0.02 14.5 0.1 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase Hepcidin PF06446.12 NODE_67831_length_234_cov_1.608040_g59890_i0forward_frame_3 - 0.042 14.2 0.3 0.042 14.2 0.3 1.6 2 0 0 2 2 2 0 Hepcidin DUF2457 PF10446.9 NODE_67831_length_234_cov_1.608040_g59890_i0forward_frame_2 - 4.7 6.2 4.9 4.7 6.2 4.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Fer4 PF00037.27 NODE_67830_length_234_cov_1.608040_g59889_i0reverse_frame_3 - 0.19 11.6 5.2 5.4 7.0 0.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Ketoacyl-synt_2 PF13723.6 NODE_67826_length_234_cov_1.638191_g59885_i0forward_frame_3 - 0.013 15.2 0.2 0.014 15.1 0.2 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain RTA1 PF04479.13 NODE_67822_length_234_cov_1.673367_g59881_i0forward_frame_2 - 0.0055 16.3 0.1 0.0058 16.3 0.1 1.0 1 0 0 1 1 1 1 RTA1 like protein Shisa PF13908.6 NODE_67822_length_234_cov_1.673367_g59881_i0forward_frame_2 - 0.0056 16.9 0.3 0.0064 16.8 0.3 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Sigma_reg_N PF13800.6 NODE_67822_length_234_cov_1.673367_g59881_i0forward_frame_2 - 0.045 14.0 0.9 0.064 13.6 0.9 1.3 1 0 0 1 1 1 0 Sigma factor regulator N-terminal TMEM132D_C PF15706.5 NODE_67822_length_234_cov_1.673367_g59881_i0forward_frame_2 - 0.15 11.9 1.6 0.19 11.5 1.6 1.4 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Glycophorin_A PF01102.18 NODE_67822_length_234_cov_1.673367_g59881_i0forward_frame_2 - 0.16 12.2 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Glycophorin A DUF3035 PF11233.8 NODE_67821_length_234_cov_1.688442_g59880_i0reverse_frame_2 - 0.027 14.7 4.0 0.033 14.5 4.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) ABC_tran PF00005.27 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 7.6e-13 49.2 0.1 8.3e-13 49.0 0.1 1.0 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.00021 21.2 0.1 0.00022 21.2 0.1 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.00026 21.6 0.1 0.00026 21.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.0017 18.8 0.1 0.0017 18.8 0.1 1.1 1 0 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.0022 18.0 0.1 0.0026 17.8 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.0062 16.3 0.1 0.0085 15.8 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.013 15.3 0.3 0.013 15.3 0.3 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_13 PF13166.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.017 13.8 0.0 0.019 13.6 0.0 1.0 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.018 15.0 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain MobB PF03205.14 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.027 14.3 0.1 0.032 14.1 0.1 1.2 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_21 PF13304.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.03 14.1 0.4 0.03 14.1 0.4 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.042 13.5 0.0 0.042 13.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.052 13.1 0.1 0.06 12.9 0.1 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.085 12.4 0.3 0.13 11.8 0.3 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B cobW PF02492.19 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.086 12.4 0.1 0.09 12.4 0.1 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.22 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.088 12.0 0.1 0.099 11.8 0.1 1.2 1 1 0 1 1 1 0 NB-ARC domain AAA_22 PF13401.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.1 12.8 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.13 11.5 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin T2SSE PF00437.20 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.16 11.0 0.2 0.17 10.9 0.2 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein TsaE PF02367.17 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.17 11.9 0.2 0.21 11.6 0.2 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_35 PF14516.6 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.21 10.4 0.0 0.21 10.4 0.0 1.0 1 0 0 1 1 1 0 AAA-like domain dNK PF01712.19 NODE_67820_length_234_cov_1.718593_g59879_i0forward_frame_2 - 0.28 11.0 0.6 0.39 10.5 0.6 1.2 1 0 0 1 1 1 0 Deoxynucleoside kinase Rz1 PF06085.11 NODE_67817_length_234_cov_1.753769_g59876_i0reverse_frame_2 - 0.016 14.9 1.3 0.058 13.1 0.0 2.0 2 0 0 2 2 2 0 Lipoprotein Rz1 precursor RseC_MucC PF04246.12 NODE_67814_length_234_cov_1.773869_g59873_i0reverse_frame_3 - 2.9 7.9 5.1 3 7.8 5.0 1.3 1 1 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DuoxA PF10204.9 NODE_67811_length_234_cov_1.804020_g59870_i0reverse_frame_3 - 0.25 10.3 2.8 0.25 10.3 2.8 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor DUF805 PF05656.14 NODE_67811_length_234_cov_1.804020_g59870_i0reverse_frame_2 - 0.23 11.9 1.9 0.29 11.6 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF805) CCDC144C PF14915.6 NODE_67809_length_234_cov_1.829146_g59868_i0reverse_frame_3 - 0.0052 15.9 1.5 0.0059 15.8 1.5 1.0 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region CRISPR_Cas9_WED PF18061.1 NODE_67809_length_234_cov_1.829146_g59868_i0reverse_frame_3 - 0.016 15.3 0.5 0.016 15.3 0.5 1.1 1 0 0 1 1 1 0 CRISPR-Cas9 WED domain L27_1 PF09058.10 NODE_67809_length_234_cov_1.829146_g59868_i0reverse_frame_3 - 0.036 14.1 0.0 0.048 13.6 0.0 1.3 1 0 0 1 1 1 0 L27_1 Endothelin PF00322.17 NODE_67809_length_234_cov_1.829146_g59868_i0forward_frame_3 - 0.054 13.1 1.3 0.054 13.1 1.3 2.4 2 0 0 2 2 2 0 Endothelin family DUF5332 PF17266.2 NODE_67808_length_234_cov_1.834171_g59867_i0forward_frame_2 - 0.0091 15.7 1.8 0.01 15.5 1.8 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5332) Ank_5 PF13857.6 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 7.9e-11 42.0 0.4 2.3e-05 24.6 0.0 2.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 1.9e-09 38.0 0.0 4.5e-09 36.8 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 3.5e-09 36.2 0.2 0.00066 19.9 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 2.1e-08 34.6 0.1 3.2e-05 24.4 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 7.6e-08 32.5 0.3 0.013 15.9 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat DUF3700 PF12481.8 NODE_67807_length_234_cov_1.834171_g59866_i0forward_frame_2 - 0.13 11.7 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 Aluminium induced protein Amelogenin PF02948.15 NODE_67803_length_234_cov_1.884422_g59862_i0reverse_frame_3 - 0.017 15.8 4.4 0.018 15.7 4.4 1.1 1 0 0 1 1 1 0 Amelogenin Collagen PF01391.18 NODE_67803_length_234_cov_1.884422_g59862_i0forward_frame_3 - 0.018 14.8 6.4 0.024 14.4 6.4 1.2 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) Collagen PF01391.18 NODE_67803_length_234_cov_1.884422_g59862_i0forward_frame_2 - 0.0028 17.4 0.6 0.0052 16.5 0.6 1.3 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) DUF2800 PF10926.8 NODE_67799_length_234_cov_1.929648_g59858_i0reverse_frame_3 - 0.15 11.3 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2800) NQRA_SLBB PF11973.8 NODE_67799_length_234_cov_1.929648_g59858_i0reverse_frame_2 - 0.072 13.7 0.0 0.095 13.3 0.0 1.1 1 0 0 1 1 1 0 NQRA C-terminal domain PID PF00640.23 NODE_67798_length_234_cov_1.959799_g59857_i0reverse_frame_3 - 0.089 12.8 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) MSV199 PF10553.9 NODE_67793_length_234_cov_2.000000_g59852_i0reverse_frame_3 - 0.04 14.2 0.7 0.052 13.8 0.7 1.3 1 1 0 1 1 1 0 MSV199 domain Myb_DNA-bind_7 PF15963.5 NODE_67793_length_234_cov_2.000000_g59852_i0reverse_frame_3 - 0.049 13.5 0.1 0.054 13.4 0.1 1.0 1 0 0 1 1 1 0 Myb DNA-binding like Myb_DNA-bind_6 PF13921.6 NODE_67793_length_234_cov_2.000000_g59852_i0reverse_frame_3 - 0.078 13.2 0.0 0.096 13.0 0.0 1.3 1 1 0 1 1 1 0 Myb-like DNA-binding domain HILPDA PF15220.6 NODE_67785_length_234_cov_2.155779_g59844_i0reverse_frame_2 - 0.026 14.6 0.0 0.033 14.3 0.0 1.2 1 0 0 1 1 1 0 Hypoxia-inducible lipid droplet-associated AFOR_N PF02730.15 NODE_67784_length_234_cov_2.165829_g59843_i0forward_frame_2 - 0.13 12.1 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, N-terminal domain Transglut_core2 PF13369.6 NODE_67782_length_234_cov_2.185930_g59841_i0reverse_frame_2 - 0.063 12.8 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily Dzip-like_N PF13815.6 NODE_67781_length_234_cov_2.206030_g59840_i0forward_frame_2 - 0.0002 21.3 0.2 0.00027 20.9 0.2 1.2 1 0 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal Dicty_REP PF05086.12 NODE_67780_length_234_cov_2.206030_g59839_i0forward_frame_3 - 0.074 11.0 1.3 0.073 11.1 1.3 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein SpoU_methylase PF00588.19 NODE_67770_length_234_cov_2.407035_g59829_i0forward_frame_2 - 2.7e-05 24.4 0.1 4.4e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 SpoU rRNA Methylase family NumbF PF06311.12 NODE_67768_length_234_cov_2.452261_g59827_i0reverse_frame_2 - 0.044 14.3 0.2 0.05 14.2 0.2 1.1 1 0 0 1 1 1 0 NUMB domain ADAM17_MPD PF16698.5 NODE_67767_length_234_cov_2.457286_g59826_i0forward_frame_3 - 0.035 14.5 0.2 0.046 14.1 0.2 1.1 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 Spy1 PF11357.8 NODE_67765_length_234_cov_2.482412_g59824_i0forward_frame_3 - 0.02 15.2 0.0 0.021 15.1 0.0 1.1 1 0 0 1 1 1 0 Cell cycle regulatory protein Radical_SAM PF04055.21 NODE_67765_length_234_cov_2.482412_g59824_i0forward_frame_2 - 2.8e-07 31.0 0.0 3.2e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 Radical SAM superfamily Phage_antiter_Q PF06323.11 NODE_67763_length_234_cov_2.567839_g59822_i0reverse_frame_2 - 1 8.8 4.3 1.2 8.7 4.3 1.1 1 0 0 1 1 1 0 Phage antitermination protein Q BROMI PF14961.6 NODE_67763_length_234_cov_2.567839_g59822_i0reverse_frame_2 - 3.4 5.0 8.1 3.4 5.0 8.1 1.0 1 0 0 1 1 1 0 Broad-minded protein EHD_N PF16880.5 NODE_67763_length_234_cov_2.567839_g59822_i0forward_frame_2 - 0.034 14.0 0.0 0.065 13.1 0.0 1.4 1 0 0 1 1 1 0 N-terminal EH-domain containing protein DUF2808 PF10989.8 NODE_67762_length_234_cov_2.572864_g59821_i0reverse_frame_3 - 0.14 12.1 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2808) zf-BED PF02892.15 NODE_67762_length_234_cov_2.572864_g59821_i0reverse_frame_2 - 0.0059 16.6 0.1 0.0082 16.1 0.1 1.2 1 0 0 1 1 1 1 BED zinc finger zf-FLZ PF04570.14 NODE_67762_length_234_cov_2.572864_g59821_i0reverse_frame_2 - 0.14 11.7 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 PSI_8 PF00796.18 NODE_67761_length_234_cov_2.623116_g59820_i0reverse_frame_2 - 0.35 10.7 3.3 0.63 9.9 3.3 1.3 1 0 0 1 1 1 0 Photosystem I reaction centre subunit VIII CLIP_1 PF18322.1 NODE_67760_length_234_cov_2.643216_g59819_i0reverse_frame_2 - 0.077 13.1 0.9 0.077 13.1 0.9 1.5 2 0 0 2 2 2 0 Serine protease Clip domain PPAF-2 Pox_A3L PF05288.11 NODE_67757_length_234_cov_2.798995_g59816_i0reverse_frame_2 - 0.14 12.2 0.4 0.21 11.6 0.0 1.4 2 0 0 2 2 2 0 Poxvirus A3L Protein RepA1_leader PF08048.12 NODE_67754_length_234_cov_2.909548_g59813_i0forward_frame_3 - 0.024 14.9 1.3 0.051 13.8 1.3 1.6 1 0 0 1 1 1 0 Tap RepA1 leader peptide Herpes_capsid PF06112.11 NODE_67746_length_234_cov_3.351759_g59805_i0forward_frame_3 - 7.5 6.6 8.7 7.9 6.5 8.7 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein IL1 PF00340.19 NODE_67743_length_234_cov_3.708543_g59802_i0forward_frame_2 - 0.043 13.5 0.1 0.06 13.0 0.1 1.2 1 0 0 1 1 1 0 Interleukin-1 / 18 UPF0164 PF03687.13 NODE_67738_length_234_cov_3.964824_g59797_i0forward_frame_3 - 0.043 12.6 0.0 0.049 12.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0164) MutH PF02976.15 NODE_67736_length_234_cov_5.085427_g59795_i0forward_frame_2 - 0.082 12.9 0.3 0.13 12.3 0.2 1.4 1 1 0 1 1 1 0 DNA mismatch repair enzyme MutH AA_permease_C PF13906.6 NODE_67736_length_234_cov_5.085427_g59795_i0forward_frame_2 - 0.21 11.7 0.4 0.21 11.7 0.4 1.8 2 1 0 2 2 2 0 C-terminus of AA_permease Pap_E4 PF02711.14 NODE_67735_length_234_cov_5.100503_g59794_i0reverse_frame_3 - 1.3 10.1 11.6 2.3 9.2 11.6 1.4 1 1 0 1 1 1 0 E4 protein FAM76 PF16046.5 NODE_67735_length_234_cov_5.100503_g59794_i0reverse_frame_3 - 6.2 6.1 12.2 6.5 6.0 12.2 1.0 1 0 0 1 1 1 0 FAM76 protein CEND1 PF15677.5 NODE_67735_length_234_cov_5.100503_g59794_i0reverse_frame_2 - 0.53 10.8 3.0 0.57 10.7 3.0 1.1 1 0 0 1 1 1 0 Cell cycle exit and neuronal differentiation protein 1 VEGFR-2_TMD PF17988.1 NODE_67735_length_234_cov_5.100503_g59794_i0forward_frame_2 - 1.9 8.0 8.0 1.8 8.1 6.2 2.0 1 1 0 1 1 1 0 VEGFR-2 Transmembrane domain DUF733 PF05306.11 NODE_67734_length_234_cov_7.346734_g59793_i0reverse_frame_2 - 0.018 15.3 1.1 0.025 14.9 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF733) wnt PF00110.19 NODE_67734_length_234_cov_7.346734_g59793_i0forward_frame_3 - 5.4 6.5 6.1 7.8 6.0 0.7 2.0 1 1 1 2 2 2 0 wnt family DUF5056 PF16479.5 NODE_67733_length_234_cov_8.814070_g59792_i0forward_frame_3 - 0.15 12.3 0.7 0.2 11.9 0.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF5056) MNE1 PF13762.6 NODE_67732_length_234_cov_11.994975_g59791_i0reverse_frame_2 - 0.029 14.4 1.1 0.031 14.3 1.1 1.1 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component TMEM135_C_rich PF15982.5 NODE_67730_length_234_cov_29.346734_g59789_i0forward_frame_3 - 0.072 13.7 0.4 0.084 13.5 0.4 1.1 1 0 0 1 1 1 0 N-terminal cysteine-rich region of Transmembrane protein 135 RCDG1 PF15725.5 NODE_67729_length_234_cov_29.693467_g59788_i0reverse_frame_2 - 1.1 9.8 8.2 1.3 9.5 8.2 1.3 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein Rubella_E2 PF05749.11 NODE_67729_length_234_cov_29.693467_g59788_i0reverse_frame_2 - 5.3 6.4 9.7 6.2 6.2 9.7 1.0 1 0 0 1 1 1 0 Rubella membrane glycoprotein E2 LacY_symp PF01306.19 NODE_67727_length_234_cov_30.432161_g59786_i0reverse_frame_2 - 0.14 10.9 13.3 0.14 10.9 13.3 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter DUF3290 PF11694.8 NODE_67727_length_234_cov_30.432161_g59786_i0reverse_frame_2 - 1.8 8.5 5.0 2.1 8.3 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) Transport_MerF PF11431.8 NODE_67725_length_234_cov_35.391960_g59784_i0reverse_frame_2 - 4.3 7.3 10.3 0.23 11.4 2.9 2.2 1 1 1 2 2 2 0 Membrane transport protein MerF DUF1392 PF07154.11 NODE_67725_length_234_cov_35.391960_g59784_i0forward_frame_3 - 0.033 14.3 0.8 0.039 14.1 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1392) CbtA_toxin PF06755.12 NODE_67720_length_234_cov_40.698492_g59779_i0reverse_frame_2 - 0.12 12.4 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 CbtA_toxin of type IV toxin-antitoxin system Ribosomal_L40e PF01020.17 NODE_67720_length_234_cov_40.698492_g59779_i0reverse_frame_2 - 0.18 11.7 1.5 1.4 8.8 0.0 2.1 2 0 0 2 2 2 0 Ribosomal L40e family Rsd_AlgQ PF04353.13 NODE_67720_length_234_cov_40.698492_g59779_i0forward_frame_3 - 0.09 12.7 0.1 0.1 12.6 0.1 1.1 1 0 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Chordopox_A30L PF06015.12 NODE_67719_length_234_cov_42.175879_g59778_i0forward_frame_3 - 0.019 14.8 3.2 0.019 14.8 3.2 1.6 1 1 1 2 2 2 0 Chordopoxvirus A30L protein Ubiquitin_4 PF18036.1 NODE_67719_length_234_cov_42.175879_g59778_i0forward_frame_2 - 0.013 15.5 2.5 0.014 15.4 2.5 1.3 1 1 0 1 1 1 0 Ubiquitin-like domain HAP1_N PF04849.13 NODE_67714_length_234_cov_48.311558_g59773_i0reverse_frame_2 - 0.0016 17.7 1.1 0.0019 17.5 1.1 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region SlyX PF04102.12 NODE_67714_length_234_cov_48.311558_g59773_i0reverse_frame_2 - 0.046 14.3 1.7 0.062 13.9 1.7 1.2 1 0 0 1 1 1 0 SlyX SLATT_4 PF18186.1 NODE_67713_length_234_cov_48.984925_g59772_i0reverse_frame_3 - 0.019 14.6 0.1 0.02 14.5 0.1 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 DUF2516 PF10724.9 NODE_67713_length_234_cov_48.984925_g59772_i0reverse_frame_3 - 0.023 14.9 0.3 0.031 14.6 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2516) UL11 PF11094.8 NODE_67710_length_234_cov_49.894472_g59769_i0reverse_frame_2 - 0.07 13.0 1.4 0.11 12.3 1.4 1.4 1 0 0 1 1 1 0 Membrane-associated tegument protein BOF PF04076.13 NODE_67709_length_234_cov_50.296482_g59768_i0forward_frame_3 - 0.015 15.4 0.0 0.017 15.2 0.0 1.0 1 0 0 1 1 1 0 Bacterial OB fold (BOF) protein Pox_Rif PF03340.13 NODE_67708_length_234_cov_50.452261_g59767_i0reverse_frame_2 - 0.023 13.1 0.1 0.023 13.1 0.1 1.1 1 0 0 1 1 1 0 Poxvirus rifampicin resistance protein CBP_CCPA PF17040.5 NODE_67707_length_234_cov_50.944724_g59766_i0forward_frame_3 - 0.13 12.8 0.2 0.15 12.7 0.2 1.1 1 0 0 1 1 1 0 Cellulose-complementing protein A Caldesmon PF02029.15 NODE_67704_length_234_cov_53.778894_g59763_i0reverse_frame_3 - 0.042 12.6 21.6 0.043 12.6 21.6 1.0 1 0 0 1 1 1 0 Caldesmon DUF5401 PF17380.2 NODE_67704_length_234_cov_53.778894_g59763_i0reverse_frame_3 - 5.1 5.0 19.7 5.1 5.0 19.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF1148 PF06618.11 NODE_67704_length_234_cov_53.778894_g59763_i0forward_frame_3 - 0.024 14.8 1.6 0.026 14.7 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1148) MAGE PF01454.19 NODE_67703_length_234_cov_53.989950_g59762_i0forward_frame_2 - 0.069 12.8 0.9 0.075 12.7 0.9 1.2 1 0 0 1 1 1 0 MAGE family Trypan_PARP PF05887.11 NODE_67699_length_234_cov_59.326633_g59758_i0reverse_frame_3 - 0.17 11.9 1.5 0.18 11.8 1.5 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) ADAM17_MPD PF16698.5 NODE_67697_length_234_cov_60.804020_g59756_i0reverse_frame_2 - 0.14 12.6 4.8 0.18 12.2 4.8 1.2 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 RRM_2 PF04059.12 NODE_67692_length_234_cov_68.733668_g59751_i0forward_frame_3 - 6e-07 29.6 0.0 8.2e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif 2 CitMHS PF03600.16 NODE_67691_length_234_cov_69.145729_g59750_i0forward_frame_2 - 0.017 14.3 0.7 0.019 14.2 0.7 1.1 1 0 0 1 1 1 0 Citrate transporter ECSCR PF15820.5 NODE_67691_length_234_cov_69.145729_g59750_i0forward_frame_2 - 0.2 11.5 2.8 0.22 11.3 2.8 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF2628 PF10947.8 NODE_67691_length_234_cov_69.145729_g59750_i0forward_frame_2 - 1.7 9.0 9.3 10 6.5 9.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) XkdW PF09636.10 NODE_67689_length_234_cov_78.125628_g59748_i0reverse_frame_3 - 0.045 13.8 0.0 0.046 13.8 0.0 1.2 1 0 0 1 1 1 0 XkdW protein Vma12 PF11712.8 NODE_67689_length_234_cov_78.125628_g59748_i0forward_frame_3 - 0.08 13.0 2.0 0.095 12.8 2.0 1.2 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Myf5 PF12232.8 NODE_67688_length_234_cov_79.030151_g59747_i0reverse_frame_3 - 0.39 11.5 4.6 1.2 9.9 4.6 2.0 1 1 0 1 1 1 0 Myogenic determination factor 5 CEBP_ZZ PF16366.5 NODE_67688_length_234_cov_79.030151_g59747_i0forward_frame_3 - 0.024 14.9 3.3 0.032 14.5 3.3 1.2 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-C3HC4_3 PF13920.6 NODE_67688_length_234_cov_79.030151_g59747_i0forward_frame_2 - 0.17 11.8 11.9 0.33 10.8 11.9 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Crisp PF08562.10 NODE_67685_length_234_cov_87.854271_g59744_i0reverse_frame_2 - 0.038 14.6 1.4 0.14 12.8 1.8 1.7 1 1 1 2 2 2 0 Crisp AAA_lid_11 PF18198.1 NODE_67685_length_234_cov_87.854271_g59744_i0forward_frame_2 - 0.11 12.3 0.2 0.14 12.0 0.2 1.1 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain Pox_RNA_Pol_19 PF05320.12 NODE_67683_length_234_cov_92.507538_g59742_i0forward_frame_3 - 0.69 9.9 13.8 0.76 9.7 13.8 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit HXXEE PF13787.6 NODE_67681_length_234_cov_113.170854_g59740_i0forward_frame_3 - 0.079 13.8 2.2 0.089 13.6 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif Pkinase PF00069.25 NODE_67680_length_234_cov_118.457286_g59739_i0reverse_frame_3 - 9.8e-09 34.9 0.7 1.1e-08 34.8 0.1 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_67680_length_234_cov_118.457286_g59739_i0reverse_frame_3 - 0.033 13.5 0.0 0.051 12.8 0.0 1.3 1 1 0 1 1 1 0 Protein tyrosine kinase Edc3_linker PF16598.5 NODE_67679_length_234_cov_121.472362_g59738_i0forward_frame_2 - 0.028 15.1 0.2 0.031 14.9 0.2 1.2 1 0 0 1 1 1 0 Linker region of enhancer of mRNA-decapping protein 3 DprA_WH PF17782.1 NODE_67678_length_234_cov_124.477387_g59737_i0reverse_frame_3 - 0.026 14.6 1.1 0.043 13.9 1.1 1.5 1 1 0 1 1 1 0 DprA winged helix domain DEC-1_N PF04625.13 NODE_67678_length_234_cov_124.477387_g59737_i0reverse_frame_3 - 0.65 8.9 3.4 0.58 9.1 3.4 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Rad10 PF03834.14 NODE_67675_length_234_cov_174.140704_g59734_i0reverse_frame_3 - 0.04 13.9 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) DNApol_Exo PF18136.1 NODE_67673_length_234_cov_190.251256_g59732_i0forward_frame_2 - 0.12 11.5 0.3 0.15 11.2 0.3 1.1 1 0 0 1 1 1 0 DNA mitochondrial polymerase exonuclease domain zf-primase PF09329.11 NODE_67670_length_234_cov_299.658291_g59729_i0reverse_frame_3 - 0.03 14.1 0.1 0.041 13.7 0.1 1.2 1 0 0 1 1 1 0 Primase zinc finger YchF-GTPase_C PF06071.13 NODE_67668_length_234_cov_515.864322_g59727_i0reverse_frame_3 - 0.03 14.5 0.0 0.04 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF933) Rop PF01815.16 NODE_67667_length_234_cov_971.366834_g59726_i0reverse_frame_3 - 0.16 11.8 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Rop protein LMBR1 PF04791.16 NODE_67666_length_234_cov_1847.864322_g59725_i0forward_frame_3 - 1.8 7.4 8.9 1.8 7.3 8.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4532 PF15046.6 NODE_67665_length_234_cov_2021.733668_g59724_i0forward_frame_2 - 0.061 12.5 4.3 0.067 12.4 4.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4532) Biopterin_H PF00351.21 NODE_67661_length_234_cov_96636.241206_g59720_i0forward_frame_3 - 0.083 11.9 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Biopterin-dependent aromatic amino acid hydroxylase DUF3874 PF12990.7 ORF99924 - 0.055 13.8 0.0 0.074 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknonw function from B. Theta Gene description (DUF3874) OppC_N PF12911.7 ORF99799 - 0.00025 20.9 0.9 0.12 12.3 0.1 2.1 2 0 0 2 2 2 2 N-terminal TM domain of oligopeptide transport permease C ubiquitin PF00240.23 ORF99190 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF99190 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF99190 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF99190 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF99190 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF99190 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF99190 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF99190 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF99190 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain LexA_DNA_bind PF01726.16 ORF98525 - 0.13 12.1 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 LexA DNA binding domain DUF4219 PF13961.6 ORF96806 - 0.071 12.8 0.4 0.12 12.1 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4219) DUF1380 PF07128.12 ORF96788 - 0.14 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1380) SLATT_5 PF18160.1 ORF96629 - 0.0038 16.6 1.1 0.0047 16.3 1.1 1.0 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 5 TMEM208_SND2 PF05620.11 ORF96189 - 0.56 10.0 2.8 0.61 9.9 2.8 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 Popeye PF04831.13 ORF96071 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region PhdYeFM_antitox PF02604.19 ORF95936 - 0.092 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system RCC1_2 PF13540.6 ORF9545 - 0.0012 18.5 3.2 0.48 10.3 0.2 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF1509 PF07420.11 ORF9545 - 0.11 11.5 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Roughex PF06020.11 ORF95278 - 0.094 11.8 2.7 0.097 11.8 2.7 1.0 1 0 0 1 1 1 0 Drosophila roughex protein RBM1CTR PF08081.11 ORF95167 - 0.17 12.0 0.1 0.17 12.0 0.1 2.3 3 0 0 3 3 3 0 RBM1CTR (NUC064) family Halogen_Hydrol PF10112.9 ORF94781 - 0.0005 20.2 0.8 0.00054 20.0 0.8 1.1 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein PriC PF07445.12 ORF94781 - 0.019 14.9 0.2 0.022 14.7 0.2 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC Remorin_C PF03763.13 ORF94781 - 0.03 14.2 2.1 0.037 13.9 2.1 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region MetOD2 PF18548.1 ORF94781 - 0.075 13.2 2.1 0.16 12.1 2.1 1.7 1 1 0 1 1 1 0 Metanogen output domain 2 HTH_Tnp_Tc3_1 PF11427.8 ORF94781 - 0.085 12.7 0.3 0.21 11.4 0.1 1.6 1 1 1 2 2 2 0 Tc3 transposase Orn_DAP_Arg_deC PF00278.22 ORF94754 - 0.063 13.5 0.1 0.064 13.5 0.1 1.2 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Popeye PF04831.13 ORF94718 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region GDP_Man_Dehyd PF16363.5 ORF9467 - 0.012 15.0 0.0 0.013 15.0 0.0 1.1 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase HigB_toxin PF09907.9 ORF94278 - 0.05 13.8 0.1 0.07 13.4 0.1 1.4 1 0 0 1 1 1 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system BLOC1S3 PF15753.5 ORF94278 - 0.12 12.5 1.1 0.13 12.4 1.1 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 Ntox34 PF15606.6 ORF93806 - 0.13 12.4 0.5 0.48 10.6 0.3 1.7 1 1 1 2 2 2 0 Bacterial toxin 34 Fer4_NifH PF00142.18 ORF93689 - 0.2 11.1 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DUF3579 PF12112.8 ORF93589 - 0.13 12.8 0.0 0.33 11.5 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3579) CxC7 PF18866.1 ORF93440 - 0.053 13.7 0.5 0.069 13.3 0.5 1.2 1 0 0 1 1 1 0 CxC7 like cysteine cluster associated with KDZ transposases DUF3073 PF11273.8 ORF93041 - 0.11 13.3 0.1 0.14 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) ADH_zinc_N_2 PF13602.6 ORF92432 - 0.0016 19.5 0.0 0.0016 19.5 0.0 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Importin_rep PF18773.1 ORF92432 - 0.19 11.5 0.5 0.39 10.5 0.5 1.5 1 1 0 1 1 1 0 Importin 13 repeat zf-C2HC5 PF06221.13 ORF92333 - 0.027 14.5 0.9 0.044 13.8 0.9 1.4 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type Halogen_Hydrol PF10112.9 ORF91998 - 0.0005 20.2 0.8 0.00054 20.0 0.8 1.1 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein PriC PF07445.12 ORF91998 - 0.019 14.9 0.2 0.022 14.7 0.2 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC Remorin_C PF03763.13 ORF91998 - 0.03 14.2 2.1 0.037 13.9 2.1 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region MetOD2 PF18548.1 ORF91998 - 0.075 13.2 2.1 0.16 12.1 2.1 1.7 1 1 0 1 1 1 0 Metanogen output domain 2 HTH_Tnp_Tc3_1 PF11427.8 ORF91998 - 0.085 12.7 0.3 0.21 11.4 0.1 1.6 1 1 1 2 2 2 0 Tc3 transposase DUF1403 PF07183.11 ORF91946 - 0.15 11.6 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1403) Rep_trans PF02486.19 ORF91890 - 0.024 14.4 0.4 0.025 14.3 0.4 1.0 1 0 0 1 1 1 0 Replication initiation factor T2SSppdC PF12528.8 ORF91339 - 0.015 16.0 0.5 0.016 15.9 0.5 1.1 1 0 0 1 1 1 0 Type II secretion prepilin peptidase dependent protein C Phage_AlpA PF05930.12 ORF89832 - 0.017 14.9 0.1 0.21 11.4 0.1 2.5 2 1 1 3 3 3 0 Prophage CP4-57 regulatory protein (AlpA) JHY PF15261.6 ORF88777 - 0.012 16.4 2.4 0.039 14.7 2.4 1.8 1 1 0 1 1 1 0 Jhy protein FhuF_C PF11575.8 ORF88290 - 0.024 14.6 0.4 0.6 10.1 0.0 2.4 2 0 0 2 2 2 0 FhuF 2Fe-2S C-terminal domain CitMHS_2 PF16980.5 ORF88233 - 0.018 13.7 0.0 0.02 13.5 0.0 1.0 1 0 0 1 1 1 0 Putative citrate transport TERT_thumb PF17984.1 ORF87889 - 0.03 14.2 0.2 0.03 14.2 0.2 1.2 1 0 0 1 1 1 0 Telomerase reverse transcriptase thumb DNA binding domain Renin_r PF07850.14 ORF87889 - 0.045 14.3 0.1 0.056 14.0 0.1 1.2 1 0 0 1 1 1 0 Renin receptor-like protein RRM_7 PF16367.5 ORF87605 - 0.13 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif zf-RING_14 PF17978.1 ORF8703 - 0.056 13.9 2.3 0.075 13.5 2.3 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Raf1_HTH PF18579.1 ORF86969 - 0.12 12.1 0.1 0.18 11.5 0.1 1.3 1 0 0 1 1 1 0 Rubisco accumulation factor 1 helix turn helix domain APC_basic PF05956.11 ORF86694 - 0.021 14.3 4.2 0.021 14.3 4.2 1.0 1 0 0 1 1 1 0 APC basic domain Transposase_23 PF03017.14 ORF86388 - 0.083 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 TNP1/EN/SPM transposase Ribosomal_L35Ae PF01247.18 ORF86030 - 0.091 12.9 0.0 0.88 9.8 0.0 2.0 2 0 0 2 2 2 0 Ribosomal protein L35Ae ubiquitin PF00240.23 ORF85973 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF85973 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF85973 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF85973 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF85973 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF85973 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF85973 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF85973 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF85973 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain DUF3906 PF13046.6 ORF85728 - 0.027 14.6 0.0 0.033 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3906) Img2 PF05046.14 ORF85728 - 0.16 12.3 0.0 0.19 12.1 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Herpes_capsid PF06112.11 ORF8545 - 6.2 6.9 20.7 6.6 6.8 20.7 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Cation_ATPase_C PF00689.21 ORF84860 - 0.12 12.0 0.1 0.15 11.8 0.1 1.1 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF4258 PF14076.6 ORF84860 - 0.13 12.7 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4258) ubiquitin PF00240.23 ORF84151 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF84151 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF84151 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF84151 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF84151 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF84151 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF84151 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF84151 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF84151 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain ubiquitin PF00240.23 ORF84007 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF84007 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF84007 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF84007 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF84007 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF84007 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF84007 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF84007 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF84007 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain PNP_phzG_C PF10590.9 ORF83898 - 0.96 9.6 6.5 21 5.3 0.0 2.5 2 1 1 3 3 3 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ApbA PF02558.16 ORF81248 - 0.0037 16.9 0.0 0.004 16.8 0.0 1.0 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA DUF3925 PF13063.6 ORF81248 - 0.023 14.9 0.0 0.025 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3925) DUF730 PF05325.11 ORF81190 - 0.022 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF730) DPM3 PF08285.11 ORF80856 - 0.27 11.4 4.2 0.31 11.3 4.2 1.1 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF2718 PF10918.8 ORF80856 - 0.57 10.7 3.7 0.65 10.5 3.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2718) RPM2 PF08579.11 ORF80479 - 0.031 14.7 0.2 0.034 14.6 0.2 1.0 1 0 0 1 1 1 0 Mitochondrial ribonuclease P subunit (RPM2) Chal_sti_synt_N PF00195.19 ORF80479 - 0.41 10.0 1.8 0.42 10.0 1.8 1.0 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain DUF723 PF05265.13 ORF80014 - 0.074 13.0 0.1 0.11 12.4 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF723) DUF4707 PF15806.5 ORF79786 - 0.019 14.0 0.1 0.02 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4707) Baculo_p24 PF05073.12 ORF79786 - 0.045 13.5 0.3 0.049 13.4 0.3 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Kelch_3 PF13415.6 ORF79478 - 0.00013 22.1 0.3 0.00087 19.5 0.2 2.0 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF79478 - 0.00022 21.1 0.5 1.1 9.3 0.0 2.9 2 1 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 ORF79478 - 0.00029 20.7 0.4 0.0046 16.9 0.5 2.1 2 0 0 2 2 2 1 Kelch motif Kelch_1 PF01344.25 ORF79478 - 0.055 13.0 0.9 0.4 10.3 0.5 2.1 2 0 0 2 2 2 0 Kelch motif Kelch_4 PF13418.6 ORF79478 - 0.12 12.4 0.8 0.5 10.4 0.8 1.8 2 0 0 2 2 2 0 Galactose oxidase, central domain MsyB PF13984.6 ORF79390 - 1e-40 138.9 9.5 1.1e-40 138.8 9.5 1.0 1 0 0 1 1 1 1 MsyB protein RET_CLD1 PF17756.1 ORF78985 - 0.13 12.6 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 RET Cadherin like domain 1 SNARE PF05739.19 ORF77996 - 0.37 10.8 5.2 0.58 10.2 5.2 1.4 1 0 0 1 1 1 0 SNARE domain Coilin_N PF15862.5 ORF77926 - 0.038 13.8 0.5 0.048 13.5 0.5 1.1 1 0 0 1 1 1 0 Coilin N-terminus Popeye PF04831.13 ORF77589 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks350.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks350.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks350.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks350.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1700 PF08006.11 ORF767 - 0.14 11.7 2.3 0.16 11.5 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Questin_oxidase PF14027.6 ORF767 - 0.3 10.6 0.8 0.33 10.4 0.8 1.0 1 0 0 1 1 1 0 Questin oxidase-like DUF5553 PF17707.1 ORF76665 - 0.035 13.5 0.8 0.036 13.5 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5553) S-AdoMet_synt_C PF02773.16 ORF75183 - 1.7e-07 31.3 0.0 2.2e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain HU-CCDC81_euk_2 PF18289.1 ORF75183 - 0.17 12.1 0.0 5.1 7.3 0.0 2.1 2 0 0 2 2 2 0 CCDC81 eukaryotic HU domain 2 Helo_like_N PF17111.5 ORF74903 - 0.032 13.6 0.1 0.035 13.5 0.1 1.1 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins SpecificRecomb PF10136.9 ORF74368 - 0.058 11.7 4.0 0.064 11.6 4.0 1.0 1 0 0 1 1 1 0 Site-specific recombinase CD99L2 PF12301.8 ORF74368 - 0.13 12.6 0.7 0.13 12.5 0.7 1.1 1 0 0 1 1 1 0 CD99 antigen like protein 2 GWT1 PF06423.12 ORF74368 - 0.16 12.1 3.1 0.19 11.8 3.1 1.0 1 0 0 1 1 1 0 GWT1 Ribosomal_S12 PF17487.2 ORF74072 - 0.02 15.6 10.0 0.032 15.0 9.0 1.7 1 1 1 2 2 2 0 Ribosomal protein S12 RexB PF15968.5 ORF74072 - 1.3 9.4 8.5 3 8.3 8.4 1.6 1 1 0 1 1 1 0 Membrane-anchored ion channel, Abi component Spore_YhaL PF14147.6 ORF74072 - 4 7.2 6.4 7.6 6.3 2.5 2.2 1 1 1 2 2 2 0 Sporulation protein YhaL Imm6 PF14434.6 ORF73062 - 0.0039 17.1 0.1 0.0044 16.9 0.1 1.3 1 1 0 1 1 1 1 Immunity protein Imm6 zf-CCCH_6 PF18585.1 ORF73062 - 0.063 13.2 0.1 0.12 12.3 0.1 1.6 1 1 1 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 FAD_binding_5 PF00941.21 ORF73062 - 0.14 11.9 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain in molybdopterin dehydrogenase DUF668 PF05003.12 ORF7296 - 0.54 10.8 2.8 2.7 8.5 2.8 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF668) LRRNT_2 PF08263.12 ORF72433 - 0.38 11.1 0.6 0.38 11.1 0.6 2.6 3 0 0 3 3 3 0 Leucine rich repeat N-terminal domain 7tm_1 PF00001.21 ORF70924 - 0.091 12.1 3.9 0.034 13.5 1.6 1.4 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) DUF4051 PF13260.6 ORF70924 - 0.85 9.4 6.9 7.8 6.3 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) DUF3139 PF11337.8 ORF70924 - 3.3 8.4 6.6 4.3 8.0 6.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) Spore_YabQ PF09578.10 ORF70906 - 0.08 13.2 1.0 0.1 12.8 0.9 1.3 1 1 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) BC10 PF06726.12 ORF7058 - 0.25 11.6 10.3 0.066 13.5 4.6 2.0 1 1 1 2 2 2 0 Bladder cancer-related protein BC10 DUF4181 PF13789.6 ORF68816 - 0.099 12.9 0.2 0.12 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) CPSase_L_D2 PF02786.17 ORF67742 - 0.15 11.5 0.2 0.24 10.9 0.2 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Ribosomal_L29 PF00831.23 ORF67642 - 0.12 12.4 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Ribosomal L29 protein DUF848 PF05852.11 ORF66615 - 0.062 13.4 0.1 0.071 13.2 0.1 1.0 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Myosin_TH1 PF06017.13 ORF66451 - 2.2e-10 40.5 2.2 2.3e-10 40.5 2.2 1.0 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding hSac2 PF12456.8 ORF66451 - 0.025 14.3 0.2 0.033 13.9 0.2 1.4 1 1 0 1 1 1 0 Inositol phosphatase Sugar_transport PF06800.12 ORF66451 - 0.055 12.8 0.6 0.063 12.6 0.6 1.1 1 0 0 1 1 1 0 Sugar transport protein WBS_methylT PF12589.8 ORF66451 - 0.058 14.2 0.5 0.073 13.8 0.5 1.1 1 0 0 1 1 1 0 Methyltransferase involved in Williams-Beuren syndrome ubiquitin PF00240.23 ORF66285 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF66285 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF66285 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF66285 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF66285 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF66285 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF66285 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF66285 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF66285 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain Sec62 PF03839.16 ORF65160 - 0.0079 15.7 2.4 0.0096 15.5 2.4 1.0 1 0 0 1 1 1 1 Translocation protein Sec62 Toxin_7 PF05980.12 ORF65089 - 0.13 12.5 1.1 0.13 12.5 1.1 2.2 2 0 0 2 2 2 0 Toxin 7 DUF554 PF04474.12 ORF6497 - 0.028 13.9 0.2 0.032 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF554) MNE1 PF13762.6 ORF64459 - 0.048 13.7 0.2 0.057 13.4 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component Alpha-amylase_C PF02806.18 ORF63919 - 0.00049 20.5 0.0 0.0006 20.2 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Med7 PF05983.11 ORF63104 - 1.2e-08 35.2 2.9 1.5e-08 35.0 2.9 1.0 1 0 0 1 1 1 1 MED7 protein SPOUT_MTase_2 PF14419.6 ORF63104 - 0.06 12.7 0.3 0.066 12.6 0.3 1.0 1 0 0 1 1 1 0 AF2226-like SPOUT RNA Methylase fused to THUMP Sod_Fe_C PF02777.18 ORF62913 - 0.045 13.9 0.0 0.15 12.3 0.0 1.7 1 1 1 2 2 2 0 Iron/manganese superoxide dismutases, C-terminal domain UPF0253 PF06786.12 ORF62913 - 0.1 12.9 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0253) Gp_dh_C PF02800.20 ORF6239 - 1.5e-11 44.2 0.0 2e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Furin-like_2 PF15913.5 ORF6223 - 0.042 14.0 0.3 0.046 13.9 0.3 1.1 1 0 0 1 1 1 0 Furin-like repeat, cysteine-rich MTA_R1 PF17226.2 ORF61293 - 0.33 11.1 3.9 0.4 10.8 3.9 1.5 1 1 0 1 1 1 0 MTA R1 domain Ribosomal_S12 PF17487.2 ORF61131 - 0.02 15.6 10.0 0.032 15.0 9.0 1.7 1 1 1 2 2 2 0 Ribosomal protein S12 RexB PF15968.5 ORF61131 - 1.3 9.4 8.5 3 8.3 8.4 1.6 1 1 0 1 1 1 0 Membrane-anchored ion channel, Abi component Spore_YhaL PF14147.6 ORF61131 - 4 7.2 6.4 7.6 6.3 2.5 2.2 1 1 1 2 2 2 0 Sporulation protein YhaL Stealth_CR3 PF17102.5 ORF6096 - 2.9 7.9 5.7 0.34 10.8 1.6 1.6 2 0 0 2 2 2 0 Stealth protein CR3, conserved region 3 ubiquitin PF00240.23 ORF60882 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF60882 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF60882 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF60882 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF60882 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF60882 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF60882 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF60882 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF60882 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain DUF5488 PF17590.2 ORF60652 - 0.087 12.6 0.1 0.2 11.4 0.0 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5488) DUF116 PF01976.17 ORF60330 - 0.7 9.4 4.6 0.91 9.0 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF116 DUF4400 PF14348.6 ORF60277 - 0.023 14.2 2.0 0.024 14.2 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) CPSase_L_D2 PF02786.17 ORF60023 - 0.15 11.5 0.2 0.24 10.9 0.2 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain UPF0515 PF15135.6 ORF59860 - 0.093 12.1 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 PyrI_C PF02748.15 ORF59860 - 0.1 12.6 1.1 1.5 8.7 0.1 2.2 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain SLATT_5 PF18160.1 ORF59024 - 0.0038 16.6 1.1 0.0047 16.3 1.1 1.0 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 5 ubiquitin PF00240.23 ORF58331 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF58331 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF58331 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF58331 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF58331 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF58331 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF58331 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF58331 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF58331 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain Torus PF16131.5 ORF58312 - 0.016 15.9 0.9 0.019 15.6 0.9 1.1 1 0 0 1 1 1 0 Torus domain PP2C PF00481.21 ORF58093 - 7e-10 39.0 0.1 7.5e-10 38.9 0.1 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C ubiquitin PF00240.23 ORF57972 - 4.9e-34 115.9 0.9 5.4e-34 115.8 0.9 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF57972 - 2.2e-16 59.4 1.4 2.4e-16 59.3 1.4 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF57972 - 5.4e-06 26.8 0.2 2.2e-05 24.8 0.2 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF57972 - 0.00053 20.0 0.4 0.5 10.4 0.1 2.0 2 0 0 2 2 2 2 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF57972 - 0.0011 18.8 0.1 0.0012 18.7 0.1 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF57972 - 0.002 18.2 0.1 0.0044 17.1 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF57972 - 0.0026 18.1 0.1 0.0029 17.9 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF57972 - 0.009 16.6 0.1 0.01 16.4 0.1 1.1 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF57972 - 0.1 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain ubiquitin PF00240.23 ORF57864 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF57864 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF57864 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF57864 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF57864 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF57864 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF57864 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF57864 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF57864 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain PhdYeFM_antitox PF02604.19 ORF57818 - 0.092 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system MTA_R1 PF17226.2 ORF57522 - 0.33 11.1 3.9 0.4 10.8 3.9 1.5 1 1 0 1 1 1 0 MTA R1 domain RMI1_C PF16099.5 ORF57326 - 0.0079 16.0 0.0 0.0079 16.0 0.0 1.1 1 0 0 1 1 1 1 Recq-mediated genome instability protein 1, C-terminal OB-fold VP7 PF00434.18 ORF56867 - 1.4 8.0 2.9 1.5 7.9 2.9 1.0 1 0 0 1 1 1 0 Glycoprotein VP7 Rab_eff_C PF04698.12 ORF55886 - 0.31 9.3 0.1 0.34 9.1 0.1 1.0 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus DUF3461 PF11944.8 ORF55438 - 0.0011 19.1 2.3 0.0012 18.9 2.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3461) Gp_dh_C PF02800.20 ORF54988 - 1.5e-11 44.2 0.0 2e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CitMHS_2 PF16980.5 ORF54917 - 0.018 13.7 0.0 0.02 13.5 0.0 1.0 1 0 0 1 1 1 0 Putative citrate transport DUF3073 PF11273.8 ORF54620 - 0.11 13.3 0.1 0.14 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3073) V-ATPase_G PF03179.15 ORF54483 - 0.022 15.3 0.1 0.024 15.2 0.1 1.0 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit Sod_Fe_C PF02777.18 ORF54227 - 0.045 13.9 0.0 0.15 12.3 0.0 1.7 1 1 1 2 2 2 0 Iron/manganese superoxide dismutases, C-terminal domain UPF0253 PF06786.12 ORF54227 - 0.1 12.9 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0253) Fijivirus_P9-2 PF06837.11 ORF53853 - 4.3 6.7 9.2 4.3 6.8 9.2 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein E1-E2_ATPase PF00122.20 ORF51847 - 0.42 10.1 2.1 0.36 10.3 1.2 1.5 1 1 1 2 2 2 0 E1-E2 ATPase Gly-zipper_YMGG PF13441.6 ORF51571 - 4e-09 36.1 52.0 6.7e-06 25.7 16.3 2.3 1 1 1 2 2 2 2 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 ORF51571 - 8.4e-06 25.7 36.6 0.0019 18.2 17.9 2.1 1 1 1 2 2 2 2 Glycine zipper Gly-zipper_OmpA PF13436.6 ORF51571 - 0.0002 21.1 35.6 0.017 14.9 15.8 2.9 1 1 2 3 3 3 3 Glycine-zipper domain Rick_17kDa_Anti PF05433.15 ORF51571 - 0.0084 15.9 40.9 0.062 13.2 19.6 2.8 1 1 1 2 2 2 2 Glycine zipper 2TM domain DUF456 PF04306.13 ORF51571 - 0.38 11.0 11.1 0.62 10.4 11.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF456) Romo1 PF10247.9 ORF51571 - 0.53 10.7 20.4 0.5 10.8 2.4 3.1 2 1 1 3 3 3 0 Reactive mitochondrial oxygen species modulator 1 DUF1269 PF06897.12 ORF51571 - 2 8.8 21.5 0.18 12.1 8.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1269) GPI2 PF06432.11 ORF51042 - 0.058 12.8 0.1 0.059 12.8 0.1 1.0 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase DUF3687 PF12459.8 ORF50483 - 0.062 12.8 0.1 0.089 12.3 0.1 1.2 1 0 0 1 1 1 0 D-Ala-teichoic acid biosynthesis protein MPS-4 PF17523.2 ORF50049 - 1.7 8.8 6.6 2.1 8.5 6.6 1.2 1 1 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Cytadhesin_P30 PF07271.11 ORF48838 - 1.1 8.7 12.7 1.2 8.6 12.7 1.2 1 0 0 1 1 1 0 Cytadhesin P30/P32 MPS-4 PF17523.2 ORF48809 - 1.1 9.4 11.4 0.084 13.0 5.3 1.9 1 1 1 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF3927 PF13064.6 ORF48809 - 1.3 9.0 7.3 1.3 9.0 3.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3927) DUF5408 PF17402.2 ORF48809 - 7.8 6.5 10.9 0.89 9.5 2.9 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5408) HopA1 PF17914.1 ORF48516 - 0.019 14.7 0.0 0.35 10.6 0.0 2.0 1 1 1 2 2 2 0 HopA1 effector protein family DUF4380 PF14315.6 ORF48297 - 0.053 12.4 0.0 0.056 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4380) MauJ PF17419.2 ORF48297 - 0.13 11.7 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Methylamine utilization protein MauJ DUF1057 PF06342.12 ORF48215 - 0.072 12.1 3.7 0.071 12.1 3.7 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) MAP17 PF15807.5 ORF48215 - 9.6 6.5 7.2 11 6.2 7.2 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF3481 PF11980.8 ORF47960 - 0.75 9.5 0.0 0.75 9.5 0.0 2.7 1 1 2 3 3 3 0 C-terminal domain of neuropilin glycoprotein Neurensin PF14927.6 ORF46070 - 0.054 13.2 0.0 0.059 13.1 0.0 1.1 1 0 0 1 1 1 0 Neurensin PKD_channel PF08016.12 ORF46018 - 7.5e-06 24.9 0.9 7.7e-06 24.8 0.9 1.0 1 0 0 1 1 1 1 Polycystin cation channel COX2_TM PF02790.15 ORF45648 - 0.033 14.3 1.2 0.036 14.2 1.2 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain DUF1251 PF06856.11 ORF44958 - 0.015 15.0 0.1 0.016 14.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1251) VEGF_C PF14554.6 ORF44477 - 0.0049 16.9 0.3 0.0088 16.1 0.3 1.5 1 0 0 1 1 1 1 VEGF heparin-binding domain BRCA-2_OB3 PF09104.10 ORF44203 - 0.026 14.2 0.2 0.026 14.2 0.2 1.1 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 IQ PF00612.27 ORF43752 - 0.04 13.7 0.3 0.04 13.7 0.3 2.3 2 0 0 2 2 2 0 IQ calmodulin-binding motif zf-RRN7 PF11781.8 ORF43155 - 0.037 13.7 0.6 0.065 12.9 0.6 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Nitroreductase PF00881.24 ORF43111 - 8.6e-09 35.7 0.0 1e-08 35.4 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 ORF43111 - 7.1e-06 25.8 0.0 7.7e-06 25.6 0.0 1.0 1 0 0 1 1 1 1 Putative TM nitroreductase Glyco_transf_6 PF03414.13 ORF42935 - 0.12 11.1 0.5 0.15 10.8 0.5 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 6 ubiquitin PF00240.23 ORF42804 - 7.3e-23 80.1 0.7 7.8e-23 80.0 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF42804 - 2.6e-13 49.6 1.4 2.9e-13 49.4 1.4 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF42804 - 0.00035 20.9 0.5 0.0004 20.7 0.5 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF42804 - 0.0016 18.5 0.0 0.0034 17.5 0.0 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF42804 - 0.0019 18.6 0.4 0.0084 16.5 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF42804 - 0.019 15.5 0.0 0.023 15.3 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF4309 PF14172.6 ORF42804 - 0.037 14.0 0.1 0.043 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) MORN PF02493.20 ORF41993 - 3.3e-08 33.0 13.0 7.3e-05 22.4 3.9 3.2 3 0 0 3 3 3 3 MORN repeat DUF448 PF04296.13 ORF41993 - 0.12 12.3 0.2 0.3 11.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF448) DUF1184 PF06683.11 ORF41735 - 0.091 12.3 0.1 0.1 12.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1184) EF-hand_6 PF13405.6 ORF41489 - 0.14 12.2 0.1 0.23 11.5 0.1 1.4 1 0 0 1 1 1 0 EF-hand domain ubiquitin PF00240.23 ORF41383 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF41383 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF41383 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF41383 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF41383 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF41383 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF41383 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF41383 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF41383 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain DUF3649 PF12365.8 ORF41231 - 0.031 14.0 0.4 0.06 13.1 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3649) IspA PF04279.15 ORF41028 - 0.015 15.5 0.3 0.016 15.4 0.3 1.0 1 0 0 1 1 1 0 Intracellular septation protein A U-box PF04564.15 ORF40858 - 6.7e-13 48.6 0.1 8e-13 48.4 0.1 1.1 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 ORF40858 - 0.025 14.4 0.2 0.17 11.7 0.1 2.2 2 1 1 3 3 3 0 Zinc-finger of the MIZ type in Nse subunit Herpes_LMP1 PF05297.11 ORF40308 - 4.6 6.3 4.3 4.8 6.3 4.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) GWT1 PF06423.12 ORF39763 - 0.16 12.1 4.5 0.19 11.8 4.5 1.3 1 1 0 1 1 1 0 GWT1 DUF730 PF05325.11 ORF39419 - 0.022 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF730) Herpes_BLRF2 PF05812.12 ORF39317 - 0.031 14.4 0.3 0.038 14.1 0.3 1.3 1 1 0 1 1 1 0 Herpesvirus BLRF2 protein MTCP1 PF08991.10 ORF39315 - 0.57 10.5 5.1 3.3 8.0 0.2 2.1 1 1 1 2 2 2 0 Mature-T-Cell Proliferation I type DUF4219 PF13961.6 ORF37222 - 0.071 12.8 0.4 0.12 12.1 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4219) DUF730 PF05325.11 ORF37168 - 0.022 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF730) DUF2208 PF09973.9 ORF37096 - 0.0072 16.0 1.4 0.0081 15.8 1.4 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) SIT PF15330.6 ORF37096 - 0.023 15.1 0.5 3.1 8.3 0.0 2.0 1 1 1 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT Bax1-I PF01027.20 ORF37096 - 0.053 13.3 0.3 0.059 13.2 0.3 1.1 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 FixQ PF05545.11 ORF37096 - 0.09 12.8 0.1 2.4 8.2 0.1 2.1 1 1 1 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ TMEM190 PF15431.6 ORF37096 - 0.1 12.8 1.5 0.13 12.4 1.5 1.3 1 1 0 1 1 1 0 Transmembrane protein 190 EphA2_TM PF14575.6 ORF37096 - 0.11 13.4 1.6 3.2 8.7 0.1 2.1 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF4500 PF14937.6 ORF37096 - 0.74 9.9 3.2 0.42 10.7 0.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4500) PRIMA1 PF16101.5 ORF37096 - 1.9 8.5 3.9 0.47 10.5 0.3 1.7 1 1 1 2 2 2 0 Proline-rich membrane anchor 1 Hep_core_N PF08290.11 ORF36940 - 0.27 11.2 3.3 0.56 10.2 3.3 1.5 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger PhdYeFM_antitox PF02604.19 ORF34099 - 0.092 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system RS4NT PF08071.12 ORF3364 - 0.026 14.6 0.6 0.1 12.7 0.0 2.1 2 0 0 2 2 2 0 RS4NT (NUC023) domain DUF3289 PF11692.8 ORF3364 - 0.049 13.2 0.0 0.05 13.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3289) p25-alpha PF05517.12 ORF33197 - 0.0054 16.9 0.4 0.046 13.9 0.4 1.9 1 1 0 1 1 1 1 p25-alpha Sulphotransf PF09037.10 ORF33197 - 0.0096 15.5 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 1 Stf0 sulphotransferase EF-hand_1 PF00036.32 ORF33197 - 0.27 10.9 0.1 0.27 10.9 0.1 2.1 3 0 0 3 3 3 0 EF hand IQ PF00612.27 ORF33139 - 0.03 14.1 1.3 0.044 13.6 0.1 1.9 2 0 0 2 2 2 0 IQ calmodulin-binding motif Gene66 PF02053.15 ORF32399 - 0.066 12.8 0.2 0.081 12.6 0.2 1.0 1 0 0 1 1 1 0 Gene 66 (IR5) protein PhdYeFM_antitox PF02604.19 ORF3176 - 0.092 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system DUF3100 PF11299.8 ORF3072 - 0.015 14.7 0.0 0.016 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3100) zf-RING_5 PF14634.6 ORF3043 - 1.1 9.3 5.5 1 9.4 1.6 2.2 2 1 0 2 2 2 0 zinc-RING finger domain DUF3496 PF12001.8 ORF30145 - 0.12 12.8 6.7 0.14 12.6 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) TraF PF13728.6 ORF29919 - 0.14 11.9 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein Metallothi_Euk2 PF12809.7 ORF29708 - 0.015 15.6 8.7 0.021 15.1 8.7 1.2 1 0 0 1 1 1 0 Eukaryotic metallothionein Ins_beta PF03488.14 ORF29708 - 1.5 8.9 13.5 3.5 7.7 0.7 2.2 2 0 0 2 2 2 0 Nematode insulin-related peptide beta type Pur_DNA_glyco PF02245.16 ORF29393 - 0.071 12.5 0.4 0.3 10.5 0.0 1.8 1 1 1 2 2 2 0 Methylpurine-DNA glycosylase (MPG) PDR_assoc PF08370.11 ORF29289 - 0.11 12.3 3.9 3.4 7.5 1.2 2.1 1 1 1 2 2 2 0 Plant PDR ABC transporter associated DUF2568 PF10823.8 ORF29066 - 0.05 13.9 0.0 0.064 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2568) DUF2207 PF09972.9 ORF28721 - 9.6 4.8 5.6 11 4.7 5.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) NifU PF01106.17 ORF28655 - 1.7e-26 92.1 0.1 1.9e-26 92.0 0.1 1.0 1 0 0 1 1 1 1 NifU-like domain DUF4046 PF13255.6 ORF28491 - 0.15 12.6 0.2 0.2 12.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4046) YqgB PF11036.8 ORF27510 - 1 9.2 2.9 6.5 6.6 1.2 2.1 2 0 0 2 2 2 0 Virulence promoting factor DUF3039 PF11238.8 ORF27083 - 0.088 12.6 0.1 0.12 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3039) zf-AN1 PF01428.16 ORF26809 - 0.6 10.3 5.6 0.14 12.4 1.6 1.9 2 0 0 2 2 2 0 AN1-like Zinc finger ubiquitin PF00240.23 ORF26499 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF26499 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF26499 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF26499 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF26499 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF26499 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF26499 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF26499 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF26499 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain Peptidase_C3G PF12381.8 ORF26224 - 0.11 12.0 0.3 0.12 11.8 0.3 1.0 1 0 0 1 1 1 0 Tungro spherical virus-type peptidase MORN PF02493.20 ORF26089 - 1.8e-12 46.4 15.4 1e-05 25.1 0.1 4.1 4 0 0 4 4 4 3 MORN repeat GH-E PF14410.6 ORF26089 - 0.0024 18.3 1.8 0.0026 18.1 1.3 1.4 1 1 1 2 2 2 1 HNH/ENDO VII superfamily nuclease with conserved GHE residues Tudor_2 PF18104.1 ORF26089 - 1.5 8.6 5.4 3.3 7.5 0.1 3.1 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain V-SNARE PF05008.15 ORF25914 - 7e-06 26.3 0.3 1.2e-05 25.6 0.3 1.5 1 1 0 1 1 1 1 Vesicle transport v-SNARE protein N-terminus DHR10 PF18595.1 ORF25914 - 0.14 12.3 0.2 4 7.5 0.0 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain AFG1_ATPase PF03969.16 ORF25849 - 1.3e-31 109.9 1.2 1.4e-31 109.7 1.2 1.0 1 0 0 1 1 1 1 AFG1-like ATPase Pox_A14 PF05767.12 ORF25392 - 0.034 14.3 0.2 0.037 14.2 0.2 1.2 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 DUF4046 PF13255.6 ORF24654 - 0.15 12.6 0.2 0.2 12.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4046) vMSA PF00695.19 ORF23685 - 0.071 12.2 0.2 0.081 12.0 0.2 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF2441 PF10386.9 ORF23685 - 0.12 12.3 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2441) HPS3_Mid PF14762.6 ORF23398 - 0.062 12.0 0.8 0.061 12.1 0.8 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3, middle region DUF3098 PF11297.8 ORF22697 - 0.095 12.3 0.0 0.2 11.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) RhoGEF67_u1 PF16615.5 ORF22643 - 4.9 7.7 8.6 0.31 11.6 2.4 2.1 2 1 1 3 3 3 0 Unstructured region one on RhoGEF 6 and 7 DUF5492 PF17596.2 ORF22583 - 0.085 13.2 2.4 0.097 13.0 2.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5492) Glyco_tranf_2_4 PF13704.6 ORF22382 - 0.009 16.5 0.0 0.0097 16.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 ApbA PF02558.16 ORF2233 - 0.036 13.7 0.0 0.041 13.5 0.0 1.0 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA PhdYeFM_antitox PF02604.19 ORF22186 - 0.092 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system SNARE PF05739.19 ORF22163 - 0.17 11.9 2.2 8.5 6.5 0.2 2.2 2 0 0 2 2 2 0 SNARE domain MNE1 PF13762.6 ORF21667 - 0.048 13.7 0.2 0.057 13.4 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component SHP PF03579.13 ORF2087 - 0.07 13.1 5.7 0.099 12.6 5.7 1.3 1 0 0 1 1 1 0 Small hydrophobic protein RabGAP-TBC PF00566.18 ORF18344 - 0.24 11.0 3.8 0.27 10.9 3.8 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain A_deaminase_N PF08451.11 ORF17546 - 0.0088 16.3 0.2 0.0096 16.2 0.2 1.3 1 0 0 1 1 1 1 Adenosine/AMP deaminase N-terminal TetR_C_12 PF16914.5 ORF16690 - 0.11 12.6 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Bacterial transcriptional repressor C-terminal DUF1979 PF09322.10 ORF16690 - 0.2 11.6 0.1 1.2 9.0 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1979) CDC4_D PF16856.5 ORF16620 - 0.0051 16.7 0.4 0.0083 16.0 0.3 1.5 1 1 0 1 1 1 1 Cell division control protein 4 dimerisation domain sCache_like PF16736.5 ORF16124 - 0.0063 16.6 1.1 0.0065 16.5 1.1 1.1 1 0 0 1 1 1 1 Single Cache-like DUF4707 PF15806.5 ORF15717 - 0.019 14.0 0.1 0.02 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4707) Baculo_p24 PF05073.12 ORF15717 - 0.045 13.5 0.3 0.049 13.4 0.3 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Bmt2 PF11968.8 ORF15541 - 0.13 12.1 0.3 0.15 11.9 0.3 1.1 1 0 0 1 1 1 0 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 PBP1_TM PF14812.6 ORF152995 - 0.018 15.4 4.2 0.022 15.1 4.2 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal CATSPERB PF15149.6 ORF152975 - 0.19 10.2 0.1 0.2 10.2 0.1 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit beta protein family Cytochrom_B559 PF00283.19 ORF152896 - 3e-07 29.8 1.2 4.7e-07 29.1 1.2 1.3 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Cytochrom_B559a PF00284.20 ORF152896 - 0.004 16.9 0.0 0.0063 16.2 0.0 1.3 1 0 0 1 1 1 1 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit Sdh_cyt PF01127.22 ORF152505 - 0.049 13.7 1.0 0.063 13.3 1.0 1.2 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PBP3 PF18056.1 ORF152384 - 0.092 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Penicillin Binding Protein 3 Domain SBF2 PF12335.8 ORF152230 - 0.027 14.1 0.0 0.032 13.9 0.0 1.1 1 0 0 1 1 1 0 Myotubularin protein PhdYeFM_antitox PF02604.19 ORF152073 - 0.092 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Scaffolding_pro PF11418.8 ORF151517 - 0.041 14.5 0.0 0.052 14.1 0.0 1.1 1 0 0 1 1 1 0 Phi29 scaffolding protein DivIC PF04977.15 ORF151517 - 0.057 13.2 0.1 0.08 12.7 0.1 1.3 1 0 0 1 1 1 0 Septum formation initiator Glyco_transf_6 PF03414.13 ORF151225 - 0.12 11.1 0.5 0.15 10.8 0.5 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 6 Halogen_Hydrol PF10112.9 ORF151173 - 0.0005 20.2 0.8 0.00054 20.0 0.8 1.1 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein PriC PF07445.12 ORF151173 - 0.019 14.9 0.2 0.022 14.7 0.2 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC Remorin_C PF03763.13 ORF151173 - 0.03 14.2 2.1 0.037 13.9 2.1 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region MetOD2 PF18548.1 ORF151173 - 0.075 13.2 2.1 0.16 12.1 2.1 1.7 1 1 0 1 1 1 0 Metanogen output domain 2 HTH_Tnp_Tc3_1 PF11427.8 ORF151173 - 0.085 12.7 0.3 0.21 11.4 0.1 1.6 1 1 1 2 2 2 0 Tc3 transposase PhdYeFM_antitox PF02604.19 ORF151 - 0.092 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Stc1 PF12898.7 ORF150785 - 0.016 15.7 1.2 0.86 10.2 0.2 2.1 2 0 0 2 2 2 0 Stc1 domain zinc_ribbon_12 PF11331.8 ORF150785 - 0.057 13.2 2.9 0.11 12.3 0.2 2.2 2 0 0 2 2 2 0 Probable zinc-ribbon domain Bowman-Birk_leg PF00228.20 ORF150785 - 0.34 11.4 6.7 3.7 8.0 0.7 2.7 2 0 0 2 2 2 0 Bowman-Birk serine protease inhibitor family PKD_channel PF08016.12 ORF150132 - 7.5e-06 24.9 0.9 7.7e-06 24.8 0.9 1.0 1 0 0 1 1 1 1 Polycystin cation channel Stc1 PF12898.7 ORF149979 - 0.026 15.0 0.0 0.046 14.3 0.0 1.3 1 1 0 1 1 1 0 Stc1 domain Ribosomal_S14 PF00253.21 ORF149979 - 0.035 13.9 1.3 2.8 7.8 0.2 2.3 2 0 0 2 2 2 0 Ribosomal protein S14p/S29e DUF2752 PF10825.8 ORF149979 - 0.11 12.6 0.0 1 9.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) SIMPL PF04402.14 ORF148927 - 0.0016 18.9 0.2 0.0017 18.8 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF541) SVIP PF15811.5 ORF148927 - 0.045 14.2 8.1 0.067 13.7 8.1 1.4 1 1 0 1 1 1 0 Small VCP/p97-interacting protein BmKX PF09132.10 ORF148337 - 0.09 12.8 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 BmKX DUF569 PF04601.13 ORF148223 - 0.015 15.0 0.0 0.015 15.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF569) FdhE PF04216.12 ORF148223 - 0.072 13.0 0.1 0.072 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation Paired_CXXCH_1 PF09699.10 ORF148181 - 0.044 13.5 4.7 1 9.1 0.4 2.2 2 0 0 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) DZR PF12773.7 ORF148181 - 0.11 12.6 4.3 0.34 11.0 4.3 1.8 1 1 0 1 1 1 0 Double zinc ribbon Prok-RING_1 PF14446.6 ORF148181 - 0.41 10.6 4.6 1.4 8.9 4.6 1.9 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-RRN7 PF11781.8 ORF146528 - 0.037 13.7 0.6 0.065 12.9 0.6 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 MTA_R1 PF17226.2 ORF146175 - 0.33 11.1 3.9 0.4 10.8 3.9 1.5 1 1 0 1 1 1 0 MTA R1 domain Fer4_20 PF14691.6 ORF145949 - 0.022 14.5 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GSHPx PF00255.19 ORF145912 - 0.0032 17.0 0.2 0.0082 15.7 0.1 1.7 2 0 0 2 2 2 1 Glutathione peroxidase Arm PF00514.23 ORF145819 - 0.13 12.4 0.3 8.2 6.6 0.1 2.5 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat Glu_synthase PF01645.17 ORF14543 - 0.23 10.6 2.1 0.25 10.4 2.1 1.0 1 0 0 1 1 1 0 Conserved region in glutamate synthase Halogen_Hydrol PF10112.9 ORF144816 - 0.0005 20.2 0.8 0.00054 20.0 0.8 1.1 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein PriC PF07445.12 ORF144816 - 0.019 14.9 0.2 0.022 14.7 0.2 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC Remorin_C PF03763.13 ORF144816 - 0.03 14.2 2.1 0.037 13.9 2.1 1.1 1 0 0 1 1 1 0 Remorin, C-terminal region MetOD2 PF18548.1 ORF144816 - 0.075 13.2 2.1 0.16 12.1 2.1 1.7 1 1 0 1 1 1 0 Metanogen output domain 2 HTH_Tnp_Tc3_1 PF11427.8 ORF144816 - 0.085 12.7 0.3 0.21 11.4 0.1 1.6 1 1 1 2 2 2 0 Tc3 transposase SNARE PF05739.19 ORF143819 - 0.37 10.8 5.2 0.58 10.2 5.2 1.4 1 0 0 1 1 1 0 SNARE domain KAR9 PF08580.10 ORF143807 - 8 4.9 8.7 7.8 4.9 8.7 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 GerPE PF10970.8 ORF143500 - 0.0058 16.8 0.5 0.0069 16.6 0.5 1.1 1 0 0 1 1 1 1 Spore germination protein GerPE DUF4947 PF16305.5 ORF143029 - 0.099 12.6 0.3 0.11 12.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4947) CDC24_OB3 PF17244.2 ORF142569 - 0.097 12.4 4.4 0.11 12.3 4.4 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 ACBP PF00887.19 ORF141729 - 0.0082 16.3 0.1 0.013 15.6 0.1 1.4 1 1 0 1 1 1 1 Acyl CoA binding protein SUB1_ProdP9 PF18213.1 ORF141500 - 0.00098 18.9 0.9 0.0011 18.7 0.9 1.2 1 0 0 1 1 1 1 SUB1 protease Prodomain ProdP9 EF-hand_8 PF13833.6 ORF141500 - 0.046 13.6 0.7 0.092 12.6 0.3 1.7 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF141500 - 0.053 13.5 0.4 1 9.5 0.2 2.9 2 1 0 2 2 2 0 EF-hand domain DUF3008 PF11450.8 ORF141500 - 0.1 12.8 0.8 0.17 12.1 0.8 1.4 1 0 0 1 1 1 0 Protein of unknwon function (DUF3008) Cytochrom_B559 PF00283.19 ORF140850 - 3e-07 29.8 1.2 4.7e-07 29.1 1.2 1.3 1 0 0 1 1 1 1 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Cytochrom_B559a PF00284.20 ORF140850 - 0.004 16.9 0.0 0.0063 16.2 0.0 1.3 1 0 0 1 1 1 1 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit Comm PF15957.5 ORF140807 - 1 9.7 5.0 1.2 9.4 5.0 1.1 1 0 0 1 1 1 0 Commissureless SRTM1 PF15872.5 ORF14019 - 6.5 7.0 8.1 29 4.9 8.6 1.7 1 1 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 Transferrin PF00405.17 ORF139540 - 0.019 14.2 0.1 0.021 14.0 0.1 1.0 1 0 0 1 1 1 0 Transferrin UPF0515 PF15135.6 ORF138979 - 0.093 12.1 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 PyrI_C PF02748.15 ORF138979 - 0.1 12.6 1.1 1.5 8.7 0.1 2.2 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain ubiquitin PF00240.23 ORF138431 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF138431 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF138431 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF138431 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF138431 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF138431 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF138431 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF138431 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF138431 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain Col_cuticle_N PF01484.17 ORF137937 - 0.16 12.0 0.2 0.29 11.2 0.1 1.5 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain ubiquitin PF00240.23 ORF137858 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF137858 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF137858 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF137858 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF137858 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF137858 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF137858 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF137858 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF137858 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain PipA PF07108.11 ORF137104 - 0.074 12.6 0.1 0.088 12.3 0.1 1.1 1 0 0 1 1 1 0 PipA protein CBP_BcsF PF11120.8 ORF137044 - 0.083 13.0 0.4 1.8 8.7 0.0 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsF FGGY_N PF00370.21 ORF136850 - 0.088 12.4 0.0 0.092 12.3 0.0 1.0 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain Phi29_Phage_SSB PF17427.2 ORF136710 - 0.023 14.9 0.0 0.024 14.8 0.0 1.1 1 0 0 1 1 1 0 Phage Single-stranded DNA-binding protein DUF2777 PF10949.8 ORF136710 - 0.13 11.9 0.7 0.16 11.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) Herpes_UL73 PF03554.13 ORF136710 - 0.33 11.0 9.8 0.65 10.0 3.6 2.0 1 1 1 2 2 2 0 UL73 viral envelope glycoprotein DUF3173 PF11372.8 ORF136274 - 0.03 14.2 0.0 0.04 13.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3173) DUF5345 PF17280.2 ORF135917 - 1.8 8.6 2.7 2.5 8.2 2.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5345) ABC_tran_Xtn PF12848.7 ORF135838 - 0.067 13.2 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_21 PF13304.6 ORF135838 - 0.082 12.7 0.1 0.1 12.4 0.1 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system PhetRS_B1 PF18262.1 ORF135838 - 0.12 12.6 0.0 0.4 10.9 0.0 1.7 2 0 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain Cytomega_TRL10 PF06084.11 ORF135503 - 0.36 10.8 2.0 0.42 10.6 2.0 1.2 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein DUF3762 PF12591.8 ORF135149 - 0.027 14.7 0.5 0.034 14.4 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3762) PcF PF09461.10 ORF134945 - 0.018 15.4 1.7 0.027 14.8 0.5 1.9 1 1 1 2 2 2 0 Phytotoxin PcF protein STIL_N PF15253.6 ORF133950 - 0.16 10.9 0.1 0.17 10.8 0.1 1.0 1 0 0 1 1 1 0 SCL-interrupting locus protein N-terminus DPM3 PF08285.11 ORF133751 - 0.27 11.4 4.2 0.31 11.3 4.2 1.1 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF2718 PF10918.8 ORF133751 - 0.57 10.7 3.7 0.65 10.5 3.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2718) SPC25 PF06703.11 ORF133458 - 0.11 12.3 0.9 0.12 12.1 0.9 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) EMP24_GP25L PF01105.24 ORF132719 - 1.4e-05 25.1 0.0 1.7e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Imm17 PF15562.6 ORF132446 - 0.022 14.6 0.2 0.031 14.1 0.2 1.3 1 0 0 1 1 1 0 Immunity protein 17 DUF5100 PF17029.5 ORF130452 - 0.16 11.8 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5100) DUF986 PF06173.12 ORF129320 - 0.011 15.8 0.2 0.011 15.8 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF986) ERGIC_N PF13850.6 ORF128888 - 0.066 13.6 0.7 0.074 13.4 0.7 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Tnp_DNA_bind PF14706.6 ORF12862 - 0.025 14.5 0.3 0.032 14.1 0.3 1.2 1 0 0 1 1 1 0 Transposase DNA-binding Orn_DAP_Arg_deC PF00278.22 ORF127294 - 0.063 13.5 0.1 0.064 13.5 0.1 1.2 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHY PF15261.6 ORF127149 - 0.012 16.4 2.4 0.039 14.7 2.4 1.8 1 1 0 1 1 1 0 Jhy protein EF-hand_1 PF00036.32 ORF125414 - 3.6e-20 70.0 5.8 7.1e-10 37.7 0.1 2.1 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF125414 - 1.4e-16 58.9 1.6 4.9e-10 38.5 0.1 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF125414 - 1.8e-15 57.1 0.2 2.1e-15 56.9 0.2 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF125414 - 3.7e-13 49.1 3.5 1.6e-08 34.3 0.3 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF125414 - 7.6e-13 47.3 6.0 1.5e-06 27.4 0.3 2.3 2 0 0 2 2 2 2 EF hand EF-hand_9 PF14658.6 ORF125414 - 3.4e-08 33.7 0.1 5.2e-08 33.1 0.0 1.3 1 1 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF125414 - 7.7e-05 22.6 0.3 0.00024 21.0 0.3 1.6 1 1 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF125414 - 0.0011 19.2 0.0 0.0014 19.0 0.0 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF125414 - 0.033 14.4 1.4 0.078 13.2 1.5 1.6 1 1 1 2 2 2 0 Dockerin type I domain UPF0154 PF03672.13 ORF125414 - 0.12 12.5 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) L-fibroin PF05849.11 ORF124923 - 0.02 14.2 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 Fibroin light chain (L-fibroin) RRM_1 PF00076.22 ORF12438 - 5.1e-14 51.8 0.0 6.1e-14 51.6 0.0 1.0 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Requiem_N PF14051.6 ORF12438 - 0.074 13.3 0.0 0.097 12.9 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of DPF2/REQ. adh_short PF00106.25 ORF12438 - 0.11 11.9 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 short chain dehydrogenase RRM_5 PF13893.6 ORF12438 - 0.16 11.6 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF2721 PF11026.8 ORF124081 - 0.11 12.3 4.4 0.13 12.1 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) dCMP_cyt_deam_1 PF00383.23 ORF123968 - 0.27 11.1 3.6 0.33 10.8 3.6 1.2 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region DUF3810 PF12725.7 ORF121514 - 2.9 7.1 6.2 3.2 7.0 6.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Phi29_Phage_SSB PF17427.2 ORF121026 - 0.023 14.9 0.0 0.024 14.8 0.0 1.1 1 0 0 1 1 1 0 Phage Single-stranded DNA-binding protein DUF2777 PF10949.8 ORF121026 - 0.13 11.9 0.7 0.16 11.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) Herpes_UL73 PF03554.13 ORF121026 - 0.33 11.0 9.8 0.65 10.0 3.6 2.0 1 1 1 2 2 2 0 UL73 viral envelope glycoprotein Cu-oxidase_4 PF02578.15 ORF120567 - 0.051 13.2 0.1 0.055 13.1 0.1 1.0 1 0 0 1 1 1 0 Multi-copper polyphenol oxidoreductase laccase XK-related PF09815.9 ORF120437 - 0.19 10.8 0.3 0.19 10.7 0.3 1.0 1 0 0 1 1 1 0 XK-related protein S-AdoMet_synt_M PF02772.16 ORF119566 - 0.055 13.7 0.0 0.056 13.7 0.0 1.0 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, central domain TGF_beta PF00019.20 ORF118967 - 0.022 15.7 2.6 0.024 15.6 2.6 1.1 1 0 0 1 1 1 0 Transforming growth factor beta like domain DCA16 PF15349.6 ORF118041 - 0.014 15.0 0.1 0.015 14.8 0.1 1.1 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 Tat PF00539.18 ORF118041 - 0.14 12.3 2.9 0.34 11.1 2.1 1.9 1 1 1 2 2 2 0 Transactivating regulatory protein (Tat) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks351.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks351.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks351.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks351.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HopA1 PF17914.1 ORF117409 - 0.019 14.7 0.0 0.35 10.6 0.0 2.0 1 1 1 2 2 2 0 HopA1 effector protein family zf-C2HE PF16278.5 ORF116290 - 0.036 14.5 1.0 0.046 14.2 1.0 1.3 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger Ribosomal_L23eN PF03939.13 ORF115361 - 2.2e-08 34.2 2.0 3.5e-08 33.5 2.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L23, N-terminal domain Ribosomal_L23 PF00276.20 ORF115361 - 0.00022 21.5 0.1 0.00047 20.5 0.0 1.5 2 0 0 2 2 2 1 Ribosomal protein L23 Ribonuc_2-5A PF06479.12 ORF115037 - 0.00089 19.4 0.2 0.0011 19.2 0.2 1.1 1 0 0 1 1 1 1 Ribonuclease 2-5A SinI PF08671.10 ORF114531 - 0.0058 16.4 2.4 0.55 10.1 0.1 2.3 2 0 0 2 2 2 2 Anti-repressor SinI LigT_PEase PF02834.16 ORF114491 - 6e-08 32.8 0.0 8.5e-08 32.3 0.0 1.4 1 1 0 1 1 1 1 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 ORF114491 - 0.017 15.1 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 2'-5' RNA ligase superfamily zf-UBP_var PF17807.1 ORF114325 - 0.2 11.4 4.0 0.47 10.2 0.6 2.2 2 0 0 2 2 2 0 Variant UBP zinc finger ATXN-1_C PF12547.8 ORF113720 - 3.5 8.0 9.1 0.22 11.9 1.7 2.1 2 0 0 2 2 2 0 Capicua transcriptional repressor modulator Ammonium_transp PF00909.21 ORF113243 - 0.15 10.7 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Ammonium Transporter Family KAsynt_C_assoc PF16197.5 ORF112482 - 0.00058 20.3 0.0 0.00073 20.0 0.0 1.2 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension Iron_permease PF04120.12 ORF112142 - 0.087 12.6 0.9 0.11 12.3 0.9 1.3 1 0 0 1 1 1 0 Low affinity iron permease Adenosine_kin PF04008.14 ORF112076 - 0.007 16.2 0.1 0.0083 15.9 0.1 1.1 1 0 0 1 1 1 1 Adenosine specific kinase CD4-extracel PF09191.10 ORF111463 - 0.11 13.0 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 CD4, extracellular Haem_bd PF14376.6 ORF111189 - 0.062 13.2 0.0 0.066 13.2 0.0 1.1 1 0 0 1 1 1 0 Haem-binding domain Phi29_Phage_SSB PF17427.2 ORF110344 - 0.023 14.9 0.0 0.024 14.8 0.0 1.1 1 0 0 1 1 1 0 Phage Single-stranded DNA-binding protein DUF2777 PF10949.8 ORF110344 - 0.13 11.9 0.7 0.16 11.6 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) Herpes_UL73 PF03554.13 ORF110344 - 0.33 11.0 9.8 0.65 10.0 3.6 2.0 1 1 1 2 2 2 0 UL73 viral envelope glycoprotein DUF730 PF05325.11 ORF110235 - 0.022 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF730) SinI PF08671.10 ORF109713 - 0.0058 16.4 2.4 0.55 10.1 0.1 2.3 2 0 0 2 2 2 2 Anti-repressor SinI DUF3169 PF11368.8 ORF108851 - 0.062 12.8 3.6 0.072 12.6 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) DUF261 PF03196.13 ORF108851 - 0.38 10.8 6.5 0.56 10.3 6.5 1.3 1 1 0 1 1 1 0 Protein of unknown function, DUF261 Metallothio_11 PF02066.15 ORF108844 - 0.041 14.1 0.1 0.055 13.6 0.1 1.2 1 0 0 1 1 1 0 Metallothionein family 11 TraY PF05509.11 ORF108756 - 1.5 8.9 6.3 2.2 8.4 6.3 1.2 1 0 0 1 1 1 0 TraY domain Popeye PF04831.13 ORF108481 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region DUF3437 PF11919.8 ORF107049 - 0.067 13.1 0.3 0.085 12.8 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) MDFI PF15316.6 ORF10589 - 0.076 13.1 2.5 0.088 12.9 2.5 1.1 1 0 0 1 1 1 0 MyoD family inhibitor DUF4637 PF15470.6 ORF10495 - 0.04 13.6 0.1 0.045 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) ESM4 PF15952.5 ORF104809 - 0.19 12.2 0.1 0.2 12.1 0.1 1.1 1 0 0 1 1 1 0 Enhancer of split M4 family Myc_target_1 PF15179.6 ORF10401 - 0.032 14.1 2.1 0.034 14.1 2.1 1.1 1 0 0 1 1 1 0 Myc target protein 1 Ldt_C PF17969.1 ORF10401 - 0.093 13.5 0.2 0.14 12.9 0.2 1.4 1 1 0 1 1 1 0 L,D-transpeptidase C-terminal domain Herpes_pp85 PF04637.12 ORF103757 - 7.8 4.8 8.1 8.4 4.7 8.1 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Popeye PF04831.13 ORF103725 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region Popeye PF04831.13 ORF103722 - 0.26 11.4 5.6 0.3 11.2 5.6 1.2 1 1 0 1 1 1 0 Popeye protein conserved region HTH_17 PF12728.7 ORF103390 - 0.044 14.0 0.1 1.1 9.5 0.0 2.3 2 1 1 3 3 3 0 Helix-turn-helix domain Tub PF01167.18 ORF102772 - 4.8e-07 29.8 0.3 5.2e-07 29.7 0.3 1.2 1 1 0 1 1 1 1 Tub family Ank_2 PF12796.7 ORF102214 - 0.00014 22.4 0.0 0.00022 21.8 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF102214 - 0.0055 17.3 0.0 0.0074 16.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF102214 - 0.081 13.3 0.1 0.29 11.5 0.1 1.8 1 1 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 ORF102214 - 0.13 12.8 0.0 0.23 12.0 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeat HTH_WhiA PF02650.14 ORF102020 - 0.018 15.3 1.2 0.027 14.8 0.8 1.5 1 1 0 1 1 1 0 WhiA C-terminal HTH domain DUF1640 PF07798.11 ORF102020 - 0.11 12.5 6.6 0.13 12.3 6.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) Exonuc_VII_L PF02601.15 ORF102020 - 0.19 11.2 5.9 0.21 11.1 5.9 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF5447 PF17525.2 ORF101543 - 0.026 15.0 0.4 0.033 14.6 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5447) Hydrolase_3 PF08282.12 ORF10101 - 7.6e-07 29.1 0.1 9.3e-07 28.8 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase ubiquitin PF00240.23 ORF100406 - 1.5e-25 88.8 0.7 1.6e-25 88.6 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF100406 - 1.7e-15 56.6 1.1 1.9e-15 56.4 1.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF100406 - 7e-05 23.2 0.4 0.00033 21.0 0.4 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF100406 - 0.0001 22.6 0.4 0.00011 22.5 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF100406 - 0.00035 20.7 0.1 0.00079 19.5 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF100406 - 0.018 15.6 0.0 0.021 15.4 0.0 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain DUF1681 PF07933.14 ORF100406 - 0.043 13.5 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) CLU_N PF15044.6 ORF100406 - 0.093 13.1 0.2 0.47 10.9 0.2 1.9 1 1 1 2 2 2 0 Mitochondrial function, CLU-N-term Ubiquitin_4 PF18036.1 ORF100406 - 0.12 12.5 0.3 1.2 9.2 0.0 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain DUF1974 PF09317.11 ORF100327 - 0.1 12.1 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) Methyltransf_34 PF11312.8 ORF100327 - 0.11 11.8 0.2 0.12 11.6 0.2 1.0 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase HTH_48 PF17906.1 ORF100124 - 0.037 14.2 0.6 0.069 13.3 0.0 1.7 2 0 0 2 2 2 0 HTH domain in Mos1 transposase PaaX PF07848.12 ORF100043 - 0.0081 16.4 0.1 0.012 15.8 0.1 1.2 1 0 0 1 1 1 1 PaaX-like protein RNA_replicase_B PF03431.13 NODE_70044_length_226_cov_0.832461_g62103_i0reverse_frame_1 - 8.1 4.8 10.1 8.1 4.8 10.1 1.0 1 0 0 1 1 1 0 RNA replicase, beta-chain DHODB_Fe-S_bind PF10418.9 NODE_70043_length_226_cov_0.832461_g62102_i0forward_frame_1 - 4 7.3 8.3 7.2 6.5 4.3 2.7 2 1 1 3 3 3 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Pentapeptide_3 PF13576.6 NODE_70042_length_226_cov_0.832461_g62101_i0forward_frame_1 - 0.06 13.5 0.1 0.076 13.2 0.1 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) IMP2_C PF18591.1 NODE_70039_length_226_cov_0.837696_g62098_i0reverse_frame_1 - 0.18 11.7 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 Immune Mapped Protein 2 (IMP2) C-terminal domain Xylo_C PF12529.8 NODE_70039_length_226_cov_0.837696_g62098_i0reverse_frame_1 - 0.18 11.4 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Xylosyltransferase C terminal MMU163 PF17119.5 NODE_70035_length_226_cov_0.973822_g62094_i0forward_frame_1 - 0.67 9.1 2.4 0.73 8.9 2.4 1.1 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis AsnC_trans_reg2 PF17805.1 NODE_70018_length_226_cov_1.109948_g62077_i0reverse_frame_1 - 0.077 13.2 0.0 0.083 13.1 0.0 1.1 1 0 0 1 1 1 0 AsnC-like ligand binding domain ASH PF15780.5 NODE_70018_length_226_cov_1.109948_g62077_i0forward_frame_1 - 3.5e-07 30.4 0.6 3.9e-07 30.2 0.6 1.0 1 0 0 1 1 1 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Motile_Sperm PF00635.26 NODE_70018_length_226_cov_1.109948_g62077_i0forward_frame_1 - 0.0038 17.0 0.1 0.0039 17.0 0.1 1.1 1 0 0 1 1 1 1 MSP (Major sperm protein) domain TMEM131_like PF12371.8 NODE_70018_length_226_cov_1.109948_g62077_i0forward_frame_1 - 0.0052 17.0 0.9 0.0063 16.7 0.9 1.1 1 0 0 1 1 1 1 Transmembrane protein 131-like GrpE PF01025.19 NODE_70016_length_226_cov_1.146597_g62075_i0reverse_frame_1 - 0.016 14.9 0.0 0.028 14.1 0.0 1.3 1 1 0 1 1 1 0 GrpE Trefoil PF00088.18 NODE_70016_length_226_cov_1.146597_g62075_i0reverse_frame_1 - 0.026 14.4 0.4 0.065 13.1 0.4 1.8 1 1 0 1 1 1 0 Trefoil (P-type) domain TMEMspv1-c74-12 PF11044.8 NODE_70016_length_226_cov_1.146597_g62075_i0forward_frame_1 - 0.27 11.2 3.2 0.49 10.4 3.2 1.3 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF865 PF05906.11 NODE_70015_length_226_cov_1.151832_g62074_i0forward_frame_1 - 2.6 7.9 6.9 3.4 7.5 2.5 2.2 2 0 0 2 2 2 0 Herpesvirus-7 repeat of unknown function (DUF865) DUF3464 PF11947.8 NODE_70011_length_226_cov_1.167539_g62070_i0reverse_frame_1 - 0.64 9.8 3.3 0.76 9.5 2.6 1.5 1 1 0 1 1 1 0 Photosynthesis affected mutant 68 Lamprin PF06403.11 NODE_70010_length_226_cov_1.172775_g62069_i0forward_frame_1 - 0.11 12.5 7.8 0.19 11.7 8.0 1.3 1 1 0 1 1 1 0 Lamprin DUF2654 PF10849.8 NODE_70009_length_226_cov_1.178010_g62068_i0forward_frame_1 - 0.13 12.5 3.5 0.18 12.1 3.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2654) Competence PF03772.16 NODE_70008_length_226_cov_1.183246_g62067_i0forward_frame_1 - 0.025 13.9 3.6 0.028 13.7 3.6 1.1 1 0 0 1 1 1 0 Competence protein DiS_P_DiS PF06750.13 NODE_70007_length_226_cov_1.188482_g62066_i0forward_frame_1 - 0.018 15.1 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain zf-Tim10_DDP PF02953.15 NODE_70004_length_226_cov_1.235602_g62063_i0forward_frame_1 - 0.034 13.8 0.2 0.043 13.5 0.2 1.4 1 1 0 1 1 1 0 Tim10/DDP family zinc finger DUF1314 PF07013.11 NODE_70003_length_226_cov_1.246073_g62062_i0forward_frame_1 - 0.12 12.2 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1314) SCP2_2 PF13530.6 NODE_69999_length_226_cov_1.251309_g62058_i0reverse_frame_1 - 0.099 13.1 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Sterol carrier protein domain HIF-1a_CTAD PF08778.10 NODE_69997_length_226_cov_1.256545_g62056_i0forward_frame_1 - 0.11 12.1 0.1 0.42 10.3 0.0 1.9 2 0 0 2 2 2 0 HIF-1 alpha C terminal transactivation domain DUF4705 PF15788.5 NODE_69993_length_226_cov_1.256545_g62052_i0forward_frame_1 - 0.053 13.8 0.4 0.095 13.0 0.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4705) Hydrolase_6 PF13344.6 NODE_69992_length_226_cov_1.256545_g62051_i0reverse_frame_1 - 0.2 11.8 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase ShK PF01549.24 NODE_69991_length_226_cov_1.272251_g62050_i0reverse_frame_1 - 0.54 10.9 13.3 1.8 9.2 1.2 2.9 2 1 0 2 2 2 0 ShK domain-like CbtA_toxin PF06755.12 NODE_69991_length_226_cov_1.272251_g62050_i0forward_frame_1 - 0.0036 17.3 0.0 0.0038 17.2 0.0 1.0 1 0 0 1 1 1 1 CbtA_toxin of type IV toxin-antitoxin system DUF4722 PF15849.5 NODE_69987_length_226_cov_1.319372_g62046_i0forward_frame_1 - 0.034 13.9 0.1 0.037 13.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4722) Ribosomal_S10 PF00338.22 NODE_69987_length_226_cov_1.319372_g62046_i0forward_frame_1 - 0.094 13.0 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S10p/S20e DUF3514 PF12027.8 NODE_69973_length_226_cov_1.486911_g62032_i0forward_frame_1 - 0.011 15.5 1.6 0.012 15.3 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3514) DUF4748 PF15932.5 NODE_69967_length_226_cov_1.534031_g62026_i0forward_frame_1 - 0.11 12.3 1.0 0.34 10.7 1.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4748) XylR_N PF06505.11 NODE_69966_length_226_cov_1.554974_g62025_i0reverse_frame_1 - 0.0073 16.0 0.0 0.017 14.9 0.0 1.5 2 0 0 2 2 2 1 Activator of aromatic catabolism Vma12 PF11712.8 NODE_69964_length_226_cov_1.575916_g62023_i0reverse_frame_1 - 0.047 13.8 2.5 0.05 13.7 2.5 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase CIMR PF00878.18 NODE_69962_length_226_cov_1.602094_g62021_i0forward_frame_1 - 0.099 12.7 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 Cation-independent mannose-6-phosphate receptor repeat UPF0126 PF03458.13 NODE_69960_length_226_cov_1.623037_g62019_i0reverse_frame_1 - 0.047 13.6 0.0 0.078 12.9 0.0 1.4 1 0 0 1 1 1 0 UPF0126 domain Keratin PF02422.16 NODE_69959_length_226_cov_1.628272_g62018_i0reverse_frame_1 - 0.11 12.3 0.2 0.13 12.0 0.2 1.2 1 0 0 1 1 1 0 Keratin Popeye PF04831.13 NODE_69959_length_226_cov_1.628272_g62018_i0forward_frame_1 - 0.14 12.3 0.9 0.14 12.3 0.9 1.1 1 0 0 1 1 1 0 Popeye protein conserved region ABC_tran_CTD PF16326.5 NODE_69958_length_226_cov_1.633508_g62017_i0forward_frame_1 - 0.00073 19.7 1.0 0.0009 19.4 1.0 1.2 1 0 0 1 1 1 1 ABC transporter C-terminal domain DUF16 PF01519.16 NODE_69958_length_226_cov_1.633508_g62017_i0forward_frame_1 - 0.024 15.1 0.4 0.026 15.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 Nsp1_C PF05064.13 NODE_69958_length_226_cov_1.633508_g62017_i0forward_frame_1 - 0.031 14.1 1.2 0.036 13.9 1.2 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region Swi5 PF07061.11 NODE_69958_length_226_cov_1.633508_g62017_i0forward_frame_1 - 0.088 12.9 3.2 0.12 12.5 3.2 1.2 1 0 0 1 1 1 0 Swi5 XhlA PF10779.9 NODE_69958_length_226_cov_1.633508_g62017_i0forward_frame_1 - 0.55 10.5 4.9 0.69 10.2 1.3 1.9 1 1 1 2 2 2 0 Haemolysin XhlA TPR_1 PF00515.28 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 1.7e-08 33.9 1.2 3.4e-08 33.0 0.8 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 3.1e-08 33.1 0.5 6.5e-08 32.1 0.4 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 4.1e-07 29.7 0.3 7.8e-07 28.8 0.3 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 9e-06 26.1 0.1 1.3e-05 25.6 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 1.5e-05 25.0 2.8 0.042 14.2 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.00016 21.9 0.3 0.00029 21.0 0.1 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.00016 22.3 0.0 0.00032 21.3 0.0 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.00025 21.5 0.9 0.00038 20.9 0.9 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.00095 19.4 0.0 0.0012 19.1 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.0017 18.0 0.7 0.015 14.9 0.0 2.1 1 1 1 2 2 2 1 TPR repeat Fis1_TPR_C PF14853.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.019 15.0 1.0 0.35 11.0 0.1 2.1 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 NODE_69955_length_226_cov_1.643979_g62014_i0forward_frame_1 - 0.024 14.7 0.0 0.045 13.8 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Tox-REase-9 PF15650.6 NODE_69947_length_226_cov_1.675393_g62006_i0reverse_frame_1 - 0.086 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 9 Castor1_N PF18700.1 NODE_69940_length_226_cov_1.727749_g61999_i0reverse_frame_1 - 0.0053 16.5 0.3 0.0077 16.0 0.3 1.2 1 0 0 1 1 1 1 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Peptidase_M61 PF05299.12 NODE_69940_length_226_cov_1.727749_g61999_i0reverse_frame_1 - 0.013 15.8 0.0 0.015 15.7 0.0 1.1 1 0 0 1 1 1 0 M61 glycyl aminopeptidase Tox-WTIP PF15654.6 NODE_69940_length_226_cov_1.727749_g61999_i0forward_frame_1 - 0.048 14.1 0.3 0.072 13.5 0.3 1.2 1 0 0 1 1 1 0 Toxin with a conserved tryptophan and TIP tripeptide motif S1-P1_nuclease PF02265.16 NODE_69935_length_226_cov_1.785340_g61994_i0reverse_frame_1 - 0.073 12.9 0.1 0.073 12.9 0.1 1.0 1 0 0 1 1 1 0 S1/P1 Nuclease DHHC PF01529.20 NODE_69931_length_226_cov_1.806283_g61990_i0reverse_frame_1 - 1.2 9.3 10.1 0.12 12.5 5.1 1.8 2 0 0 2 2 2 0 DHHC palmitoyltransferase CheX PF13690.6 NODE_69931_length_226_cov_1.806283_g61990_i0forward_frame_1 - 0.0043 17.2 0.0 0.005 17.0 0.0 1.1 1 0 0 1 1 1 1 Chemotaxis phosphatase CheX Imm5 PF14423.6 NODE_69931_length_226_cov_1.806283_g61990_i0forward_frame_1 - 0.14 12.4 0.4 0.15 12.2 0.4 1.1 1 0 0 1 1 1 0 Immunity protein Imm5 SBDS_C PF09377.10 NODE_69925_length_226_cov_1.884817_g61984_i0forward_frame_1 - 0.01 15.8 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 0 SBDS protein C-terminal domain Rubredoxin_2 PF18073.1 NODE_69924_length_226_cov_1.890052_g61983_i0forward_frame_1 - 0.021 14.5 0.7 0.041 13.6 0.7 1.5 1 0 0 1 1 1 0 Rubredoxin metal binding domain APS-reductase_C PF12139.8 NODE_69923_length_226_cov_1.905759_g61982_i0forward_frame_1 - 0.16 12.2 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Adenosine-5'-phosphosulfate reductase beta subunit BBP2 PF07642.11 NODE_69922_length_226_cov_1.910995_g61981_i0reverse_frame_1 - 0.15 11.2 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative beta-barrel porin-2, OmpL-like. bbp2 WD40 PF00400.32 NODE_69920_length_226_cov_1.947644_g61979_i0reverse_frame_1 - 2.8e-08 34.3 0.0 6e-06 26.9 0.1 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat Ge1_WD40 PF16529.5 NODE_69920_length_226_cov_1.947644_g61979_i0reverse_frame_1 - 0.0008 18.5 0.0 0.0008 18.5 0.0 1.2 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 NODE_69920_length_226_cov_1.947644_g61979_i0reverse_frame_1 - 0.0014 18.9 0.0 0.22 11.9 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Phage_holin_7_1 PF16081.5 NODE_69919_length_226_cov_1.958115_g61978_i0forward_frame_1 - 2.7 8.2 11.7 4.9 7.3 0.7 3.0 1 1 2 3 3 3 0 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family BK_channel_a PF03493.18 NODE_69916_length_226_cov_2.000000_g61975_i0forward_frame_1 - 0.03 14.5 0.1 0.034 14.3 0.1 1.1 1 0 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit tRNA-synt_2b PF00587.25 NODE_69914_length_226_cov_2.041885_g61973_i0forward_frame_1 - 0.064 13.2 0.0 0.072 13.0 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) IBB PF01749.20 NODE_69912_length_226_cov_2.109948_g61971_i0forward_frame_1 - 0.029 14.8 0.1 0.034 14.6 0.1 1.2 1 0 0 1 1 1 0 Importin beta binding domain Flp_Fap PF04964.14 NODE_69899_length_226_cov_2.319372_g61958_i0reverse_frame_1 - 0.18 11.6 0.2 0.29 11.0 0.2 1.3 1 0 0 1 1 1 0 Flp/Fap pilin component Cyd_oper_YbgE PF09600.10 NODE_69898_length_226_cov_2.366492_g61957_i0reverse_frame_1 - 0.029 14.7 0.2 0.059 13.7 0.1 1.5 1 1 1 2 2 2 0 Cyd operon protein YbgE (Cyd_oper_YbgE) CCDC24 PF15669.5 NODE_69894_length_226_cov_2.492147_g61953_i0reverse_frame_1 - 0.1 12.5 2.1 0.11 12.3 2.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family FecCD PF01032.18 NODE_69894_length_226_cov_2.492147_g61953_i0forward_frame_1 - 3.3e-13 49.3 1.0 3.4e-13 49.3 1.0 1.0 1 0 0 1 1 1 1 FecCD transport family DUF3606 PF12244.8 NODE_69893_length_226_cov_2.539267_g61952_i0forward_frame_1 - 0.056 13.4 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3606) TMF_DNA_bd PF12329.8 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 8.6e-05 22.5 13.8 0.01 15.8 4.8 2.0 1 1 1 2 2 2 2 TATA element modulatory factor 1 DNA binding TRAF_BIRC3_bd PF16673.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.00044 20.0 5.0 0.0054 16.5 0.3 2.4 1 1 1 2 2 2 1 TNF receptor-associated factor BIRC3 binding domain DUF4201 PF13870.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.0077 16.0 7.5 0.29 10.8 7.5 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) DUF5082 PF16888.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.0078 16.5 7.9 0.065 13.5 2.3 2.1 1 1 0 2 2 2 1 Domain of unknown function (DUF5082) Fcf2 PF08698.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.021 15.2 0.1 0.024 15.0 0.1 1.2 1 0 0 1 1 1 0 Fcf2 pre-rRNA processing ABC_tran_CTD PF16326.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.022 15.0 9.4 0.1 12.8 4.6 2.5 1 1 1 2 2 2 0 ABC transporter C-terminal domain CEP209_CC5 PF16574.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.028 14.6 6.7 0.08 13.1 6.7 1.7 1 1 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 BLOC1_2 PF10046.9 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.046 14.0 7.1 0.27 11.6 6.8 1.9 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Peptidase_S46 PF10459.9 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.05 12.3 0.5 0.051 12.2 0.5 1.0 1 0 0 1 1 1 0 Peptidase S46 DUF465 PF04325.13 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.057 13.5 0.5 0.057 13.5 0.5 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF465) DUF1192 PF06698.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.059 13.4 1.0 0.059 13.4 1.0 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1192) Prefoldin PF02996.17 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.084 12.8 6.6 0.077 12.9 2.2 2.0 1 1 1 2 2 2 0 Prefoldin subunit FAM76 PF16046.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.095 12.0 3.4 0.13 11.6 3.4 1.3 1 1 0 1 1 1 0 FAM76 protein DUF641 PF04859.12 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.12 12.7 4.7 0.27 11.5 4.7 1.6 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) FlxA PF14282.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.13 12.3 6.6 0.19 11.7 6.6 1.4 1 1 0 1 1 1 0 FlxA-like protein DivIC PF04977.15 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.15 11.8 7.7 0.14 11.9 2.4 2.1 1 1 1 2 2 2 0 Septum formation initiator Trimer_CC PF08954.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.16 11.6 3.2 2.2 7.9 1.1 2.1 2 0 0 2 2 2 0 Trimerisation motif DUF724 PF05266.14 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.16 11.8 4.0 0.22 11.3 4.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ACCA PF03255.14 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.17 11.7 2.5 0.24 11.3 2.5 1.3 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JIP_LZII PF16471.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.19 11.9 8.0 0.69 10.1 1.9 2.1 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II PKcGMP_CC PF16808.5 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.2 11.5 6.5 1.3 9.0 2.5 3.1 2 1 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF16 PF01519.16 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.22 12.0 4.4 0.88 10.1 4.4 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 UPF0242 PF06785.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.23 11.6 6.8 0.38 10.8 6.8 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ADIP PF11559.8 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.28 11.3 7.5 4.5 7.3 7.4 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding SlyX PF04102.12 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.29 11.8 5.0 0.43 11.2 2.7 2.2 1 1 1 2 2 2 0 SlyX Prefoldin_2 PF01920.20 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.32 11.0 9.9 0.24 11.4 3.4 2.1 1 1 1 2 2 2 0 Prefoldin subunit DUF4094 PF13334.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.38 11.2 6.5 3.8 8.0 6.5 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4094) Csm1_N PF18504.1 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.44 10.9 7.1 0.76 10.2 1.9 2.3 1 1 1 2 2 2 0 Csm1 N-terminal domain LapA_dom PF06305.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.62 9.9 6.5 3.1 7.7 0.5 2.5 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain CENP-Q PF13094.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.63 10.2 5.8 1.2 9.4 4.5 1.8 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit FlaC_arch PF05377.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 0.63 10.5 9.3 0.48 10.9 2.9 2.1 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Fib_alpha PF08702.10 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 1 9.5 5.8 2.7 8.2 5.8 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DP PF08781.10 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 1.2 9.0 7.1 1 9.2 1.1 2.0 1 1 1 2 2 2 0 Transcription factor DP DUF4200 PF13863.6 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 1.2 9.5 9.9 18 5.8 9.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Spc24 PF08286.11 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_1 - 1.4 9.2 7.3 1 9.6 2.1 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Lamprin PF06403.11 NODE_69889_length_226_cov_2.670157_g61948_i0forward_frame_1 - 0.0095 15.9 2.9 0.011 15.6 2.9 1.1 1 0 0 1 1 1 1 Lamprin Albumin_I PF08027.11 NODE_69883_length_226_cov_2.743455_g61942_i0reverse_frame_1 - 0.029 14.0 0.8 0.048 13.3 0.1 1.8 2 0 0 2 2 2 0 Albumin I chain b FeThRed_B PF02943.15 NODE_69883_length_226_cov_2.743455_g61942_i0reverse_frame_1 - 0.098 12.7 0.7 0.15 12.1 0.7 1.5 1 1 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain DUF2259 PF10016.9 NODE_69881_length_226_cov_2.764398_g61940_i0forward_frame_1 - 0.003 17.5 0.0 0.0032 17.4 0.0 1.1 1 0 0 1 1 1 1 Predicted secreted protein (DUF2259) FERM_F1 PF18379.1 NODE_69880_length_226_cov_2.874346_g61939_i0reverse_frame_1 - 0.075 13.1 0.1 0.095 12.7 0.1 1.1 1 0 0 1 1 1 0 FERM F1 ubiquitin-like domain Ferrochelatase PF00762.19 NODE_69878_length_226_cov_2.916230_g61937_i0reverse_frame_1 - 0.21 10.6 0.0 0.21 10.6 0.0 1.0 1 0 0 1 1 1 0 Ferrochelatase PGM1_C PF18105.1 NODE_69876_length_226_cov_2.963351_g61935_i0forward_frame_1 - 0.13 11.8 0.1 0.17 11.4 0.1 1.3 1 0 0 1 1 1 0 PGM1 C-terminal domain SpecificRecomb PF10136.9 NODE_69874_length_226_cov_3.109948_g61933_i0reverse_frame_1 - 0.12 10.7 0.0 0.12 10.6 0.0 1.0 1 0 0 1 1 1 0 Site-specific recombinase DUF3930 PF13067.6 NODE_69869_length_226_cov_3.827225_g61928_i0reverse_frame_1 - 0.079 13.2 0.9 0.11 12.7 0.5 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3930) Peptidase_M13_N PF05649.13 NODE_69866_length_226_cov_4.486911_g61925_i0forward_frame_1 - 0.19 11.4 0.4 0.22 11.1 0.4 1.1 1 0 0 1 1 1 0 Peptidase family M13 YccF PF03733.13 NODE_69865_length_226_cov_4.523560_g61924_i0forward_frame_1 - 0.42 11.4 5.7 0.58 10.9 5.7 1.2 1 0 0 1 1 1 0 Inner membrane component domain Lamprin PF06403.11 NODE_69858_length_226_cov_21.643979_g61917_i0forward_frame_1 - 0.0045 16.9 0.4 0.0051 16.8 0.4 1.1 1 0 0 1 1 1 1 Lamprin ETRAMP PF09716.10 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_1 - 1.7 8.8 10.0 2.8 8.1 10.0 1.4 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) NodA PF02474.15 NODE_69848_length_226_cov_39.617801_g61907_i0reverse_frame_1 - 0.049 13.3 0.0 0.053 13.2 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein A (NodA) SprB PF13573.6 NODE_69845_length_226_cov_42.172775_g61904_i0forward_frame_1 - 0.11 12.3 3.7 0.16 11.8 3.7 1.3 1 0 0 1 1 1 0 SprB repeat Spore_permease PF03845.13 NODE_69844_length_226_cov_42.832461_g61903_i0forward_frame_1 - 0.0082 15.0 4.8 0.0091 14.9 4.8 1.0 1 0 0 1 1 1 1 Spore germination protein Ribosomal_L5e PF17144.4 NODE_69837_length_226_cov_49.722513_g61896_i0forward_frame_1 - 0.078 13.0 0.6 0.086 12.8 0.6 1.1 1 0 0 1 1 1 0 Ribosomal large subunit proteins 60S L5, and 50S L18 Metalloenzyme PF01676.18 NODE_69823_length_226_cov_60.554974_g61882_i0reverse_frame_1 - 0.081 12.3 0.0 0.084 12.2 0.0 1.0 1 0 0 1 1 1 0 Metalloenzyme superfamily Chromo PF00385.24 NODE_69819_length_226_cov_71.089005_g61878_i0reverse_frame_1 - 5e-13 48.7 0.5 6.1e-13 48.5 0.5 1.1 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain ZF-HD_dimer PF04770.12 NODE_69815_length_226_cov_80.890052_g61874_i0forward_frame_1 - 1.5 9.2 7.3 4.1 7.8 1.9 2.3 2 0 0 2 2 2 0 ZF-HD protein dimerisation region DUF2458 PF10454.9 NODE_69814_length_226_cov_81.769634_g61873_i0reverse_frame_1 - 0.0085 15.8 1.1 0.0089 15.7 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2458) DUF3760 PF12586.8 NODE_69813_length_226_cov_81.984293_g61872_i0reverse_frame_1 - 0.15 12.2 0.4 0.65 10.2 0.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3760) Fanconi_A PF03511.14 NODE_69810_length_226_cov_86.926702_g61869_i0forward_frame_1 - 0.066 13.1 2.8 0.11 12.4 2.8 1.4 1 1 0 1 1 1 0 Fanconi anaemia group A protein TSR PF18487.1 NODE_69802_length_226_cov_137.617801_g61861_i0forward_frame_1 - 0.011 15.9 0.9 3.5 7.9 0.1 2.3 2 0 0 2 2 2 0 Thrombospondin type 1 repeat Dicty_CTDC PF00526.18 NODE_69799_length_226_cov_192.109948_g61858_i0forward_frame_1 - 0.3 11.0 2.1 0.57 10.1 2.1 1.4 1 0 0 1 1 1 0 Dictyostelium (slime mold) repeat DUF782 PF05614.11 NODE_69797_length_226_cov_204.136126_g61856_i0forward_frame_1 - 0.052 13.9 0.0 0.065 13.6 0.0 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) Rdx PF10262.9 NODE_69796_length_226_cov_211.502618_g61855_i0reverse_frame_1 - 0.0062 16.7 0.0 0.011 15.9 0.0 1.4 1 1 0 1 1 1 1 Rdx family CK_II_beta PF01214.18 NODE_69796_length_226_cov_211.502618_g61855_i0reverse_frame_1 - 0.048 13.5 1.4 0.048 13.5 1.4 1.1 1 0 0 1 1 1 0 Casein kinase II regulatory subunit Zfx_Zfy_act PF04704.13 NODE_69795_length_226_cov_326.497382_g61854_i0forward_frame_1 - 0.18 10.9 0.2 0.19 10.8 0.2 1.0 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region DUF3828 PF12883.7 NODE_69783_length_227_cov_0.833333_g61842_i0forward_frame_1 - 0.2 12.0 0.0 0.22 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3828) Clat_adaptor_s PF01217.20 NODE_69782_length_227_cov_0.833333_g61841_i0reverse_frame_1 - 0.036 14.0 0.3 0.04 13.8 0.3 1.0 1 0 0 1 1 1 0 Clathrin adaptor complex small chain CLAMP PF14769.6 NODE_69780_length_227_cov_0.833333_g61839_i0reverse_frame_1 - 0.019 15.4 0.0 0.02 15.4 0.0 1.2 1 0 0 1 1 1 0 Flagellar C1a complex subunit C1a-32 Y_phosphatase2 PF03162.13 NODE_69778_length_227_cov_0.875000_g61837_i0reverse_frame_1 - 0.13 11.9 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family DUF4959 PF16323.5 NODE_69775_length_227_cov_0.921875_g61834_i0forward_frame_1 - 0.0038 17.5 0.0 0.0049 17.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4959) Dpy19 PF10034.9 NODE_69773_length_227_cov_0.942708_g61832_i0forward_frame_1 - 5.1 5.2 8.2 5.3 5.1 8.2 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation CD45 PF12567.8 NODE_69768_length_227_cov_0.994792_g61827_i0reverse_frame_1 - 0.068 13.2 1.2 0.08 12.9 0.1 1.6 2 0 0 2 2 2 0 Leukocyte receptor CD45 FPP PF05911.11 NODE_69768_length_227_cov_0.994792_g61827_i0reverse_frame_1 - 0.076 11.2 0.1 0.092 10.9 0.1 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil DUF1540 PF07561.11 NODE_69765_length_227_cov_1.036458_g61824_i0reverse_frame_1 - 0.065 13.5 0.7 0.065 13.5 0.7 1.7 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1540) DUF4637 PF15470.6 NODE_69763_length_227_cov_1.046875_g61822_i0reverse_frame_1 - 0.17 11.6 1.5 0.21 11.3 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Op_neuropeptide PF08035.11 NODE_69745_length_227_cov_1.250000_g61804_i0reverse_frame_1 - 0.13 12.1 0.5 0.13 12.1 0.5 1.8 2 0 0 2 2 2 0 Opioids neuropeptide CCER1 PF15482.6 NODE_69744_length_227_cov_1.250000_g61803_i0forward_frame_1 - 3.3 7.6 13.9 3.6 7.4 13.9 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF5345 PF17280.2 NODE_69742_length_227_cov_1.250000_g61801_i0reverse_frame_1 - 0.047 13.7 0.2 0.067 13.2 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5345) PDEase_I PF00233.19 NODE_69739_length_227_cov_1.296875_g61798_i0reverse_frame_1 - 2.7e-22 79.7 0.6 2.7e-22 79.7 0.6 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Nuc_H_symport PF03825.16 NODE_69739_length_227_cov_1.296875_g61798_i0forward_frame_1 - 0.024 13.6 0.1 0.026 13.5 0.1 1.1 1 0 0 1 1 1 0 Nucleoside H+ symporter LPP20 PF02169.16 NODE_69738_length_227_cov_1.317708_g61797_i0forward_frame_1 - 0.089 13.1 1.8 0.1 13.0 1.8 1.1 1 0 0 1 1 1 0 LPP20 lipoprotein TMEM135_C_rich PF15982.5 NODE_69736_length_227_cov_1.322917_g61795_i0reverse_frame_1 - 0.019 15.6 0.7 0.021 15.4 0.7 1.0 1 0 0 1 1 1 0 N-terminal cysteine-rich region of Transmembrane protein 135 Mad3_BUB1_I PF08311.12 NODE_69730_length_227_cov_1.375000_g61789_i0reverse_frame_1 - 0.028 14.4 0.2 0.034 14.1 0.2 1.1 1 0 0 1 1 1 0 Mad3/BUB1 homology region 1 Homez PF11569.8 NODE_69728_length_227_cov_1.395833_g61787_i0forward_frame_1 - 0.34 10.4 1.5 0.56 9.7 1.5 1.4 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez IMS_HHH PF11798.8 NODE_69727_length_227_cov_1.416667_g61786_i0forward_frame_1 - 0.027 14.8 0.1 0.06 13.7 0.1 1.6 1 0 0 1 1 1 0 IMS family HHH motif RCC1 PF00415.18 NODE_69725_length_227_cov_1.416667_g61784_i0reverse_frame_1 - 9.3e-11 42.2 0.2 6.3e-08 33.1 0.0 2.0 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_69725_length_227_cov_1.416667_g61784_i0reverse_frame_1 - 4.8e-06 26.2 1.5 7.8e-06 25.6 0.2 1.9 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat DUF4736 PF15883.5 NODE_69721_length_227_cov_1.453125_g61780_i0reverse_frame_1 - 0.043 13.5 0.0 0.046 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) YMF19 PF02326.15 NODE_69721_length_227_cov_1.453125_g61780_i0forward_frame_1 - 0.078 13.8 0.2 0.09 13.6 0.2 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 IglC PF11550.8 NODE_69720_length_227_cov_1.458333_g61779_i0forward_frame_1 - 0.0021 17.5 0.0 0.0024 17.4 0.0 1.0 1 0 0 1 1 1 1 Intracellular growth locus C protein Endopep_inhib PF16800.5 NODE_69719_length_227_cov_1.463542_g61778_i0reverse_frame_1 - 0.00097 19.1 0.1 0.001 19.0 0.1 1.1 1 0 0 1 1 1 1 IseA DL-endopeptidase inhibitor DUF1882 PF08966.11 NODE_69716_length_227_cov_1.510417_g61775_i0forward_frame_1 - 1.7 8.9 6.3 16 5.8 0.0 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF1882) HTH_1 PF00126.27 NODE_69714_length_227_cov_1.541667_g61773_i0reverse_frame_1 - 5e-07 29.6 0.1 1.2e-06 28.3 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF1182 PF06681.13 NODE_69714_length_227_cov_1.541667_g61773_i0forward_frame_1 - 0.041 13.5 1.2 0.04 13.5 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1182) Cyclotide PF03784.13 NODE_69712_length_227_cov_1.552083_g61771_i0reverse_frame_1 - 0.12 12.5 4.9 0.3 11.2 4.9 1.6 1 0 0 1 1 1 0 Cyclotide family zf-AN1 PF01428.16 NODE_69708_length_227_cov_1.588542_g61767_i0reverse_frame_1 - 0.012 15.7 1.1 0.02 15.1 1.1 1.4 1 0 0 1 1 1 0 AN1-like Zinc finger Pkinase PF00069.25 NODE_69707_length_227_cov_1.588542_g61766_i0reverse_frame_1 - 3.5e-12 46.2 0.0 3.7e-12 46.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69707_length_227_cov_1.588542_g61766_i0reverse_frame_1 - 4.8e-05 22.8 0.0 5.3e-05 22.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Lactococcin_972 PF09683.10 NODE_69705_length_227_cov_1.588542_g61764_i0forward_frame_1 - 0.015 15.8 0.1 0.025 15.1 0.1 1.3 1 0 0 1 1 1 0 Bacteriocin (Lactococcin_972) V_ATPase_I PF01496.19 NODE_69703_length_227_cov_1.604167_g61762_i0forward_frame_1 - 2.1e-07 29.3 0.1 2.4e-07 29.1 0.1 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family DUF2701 PF10857.8 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 0.21 11.6 5.7 0.29 11.2 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) DUF4191 PF13829.6 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 0.46 9.8 4.2 0.5 9.7 4.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF2254 PF10011.9 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 0.93 8.2 4.2 1 8.1 4.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF2207 PF09972.9 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 1.3 7.7 5.0 1.4 7.6 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MMPL PF03176.15 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 2.7 6.8 6.0 3 6.7 6.0 1.0 1 0 0 1 1 1 0 MMPL family DUF4229 PF14012.6 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 5.3 7.2 14.6 6.8 6.9 14.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) Ac81 PF05820.11 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 5.9 6.4 7.9 7 6.2 7.9 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 DUF818 PF05677.12 NODE_69698_length_227_cov_1.645833_g61757_i0reverse_frame_1 - 8.5 5.2 7.6 10 5.0 7.6 1.2 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) Collagen PF01391.18 NODE_69697_length_227_cov_1.645833_g61756_i0forward_frame_1 - 0.0042 16.8 4.1 0.18 11.5 0.8 2.1 2 0 0 2 2 2 2 Collagen triple helix repeat (20 copies) MARVEL PF01284.23 NODE_69690_length_227_cov_1.708333_g61749_i0reverse_frame_1 - 0.0074 16.3 0.5 0.015 15.3 0.5 1.6 1 1 0 1 1 1 1 Membrane-associating domain ARL2_Bind_BART PF11527.8 NODE_69689_length_227_cov_1.708333_g61748_i0forward_frame_1 - 0.047 13.8 0.3 0.062 13.4 0.3 1.2 1 0 0 1 1 1 0 The ARF-like 2 binding protein BART DUF5527 PF17665.1 NODE_69678_length_227_cov_1.796875_g61737_i0forward_frame_1 - 0.047 13.2 0.1 0.057 13.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5527) FAM181 PF15238.6 NODE_69677_length_227_cov_1.807292_g61736_i0forward_frame_1 - 0.79 9.5 5.8 0.89 9.3 5.8 1.1 1 0 0 1 1 1 0 FAM181 DUF485 PF04341.12 NODE_69664_length_227_cov_1.901042_g61723_i0forward_frame_1 - 0.014 15.3 0.4 0.019 14.9 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 TMEM43 PF07787.12 NODE_69662_length_227_cov_1.927083_g61721_i0forward_frame_1 - 2.3 7.5 5.7 2.8 7.3 5.7 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 Pns11_12 PF17464.2 NODE_69656_length_227_cov_2.046875_g61715_i0reverse_frame_1 - 1.4 8.6 3.3 1.6 8.4 3.3 1.0 1 0 0 1 1 1 0 Non-structural protein 11 and 12 Mdv1 PF11542.8 NODE_69655_length_227_cov_2.057292_g61714_i0reverse_frame_1 - 0.022 14.7 0.3 0.037 14.0 0.3 1.3 1 0 0 1 1 1 0 Mitochondrial division protein 1 DUF1489 PF07370.11 NODE_69655_length_227_cov_2.057292_g61714_i0reverse_frame_1 - 0.072 12.8 0.0 0.083 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1489) WaaY PF06176.11 NODE_69653_length_227_cov_2.062500_g61712_i0reverse_frame_1 - 2.7e-36 125.3 2.4 3e-36 125.2 2.4 1.0 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) Hpr_kinase_C PF07475.12 NODE_69653_length_227_cov_2.062500_g61712_i0reverse_frame_1 - 0.075 12.5 0.0 0.077 12.5 0.0 1.0 1 0 0 1 1 1 0 HPr Serine kinase C-terminal domain E3_UFM1_ligase PF09743.9 NODE_69642_length_227_cov_2.182292_g61701_i0reverse_frame_1 - 0.083 12.5 0.2 0.093 12.3 0.2 1.0 1 0 0 1 1 1 0 E3 UFM1-protein ligase 1 ASF1_hist_chap PF04729.13 NODE_69642_length_227_cov_2.182292_g61701_i0forward_frame_1 - 0.041 13.8 0.0 0.048 13.6 0.0 1.1 1 0 0 1 1 1 0 ASF1 like histone chaperone Vma12 PF11712.8 NODE_69640_length_227_cov_2.223958_g61699_i0forward_frame_1 - 1.4 9.0 3.1 1.7 8.7 3.1 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Phage_tail_L PF05100.12 NODE_69637_length_227_cov_2.244792_g61696_i0reverse_frame_1 - 0.024 13.9 0.0 0.1 11.9 0.0 1.7 1 1 1 2 2 2 0 Phage minor tail protein L SWC7 PF17330.2 NODE_69629_length_227_cov_2.453125_g61688_i0reverse_frame_1 - 0.0087 16.1 1.4 0.39 10.8 0.1 2.1 1 1 1 2 2 2 2 SWR1 chromatin-remodelling complex, sub-unit Swc7 STAG PF08514.11 NODE_69629_length_227_cov_2.453125_g61688_i0forward_frame_1 - 0.21 11.5 1.6 0.22 11.4 0.7 1.4 1 1 0 1 1 1 0 STAG domain Taxilin PF09728.9 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.0075 15.5 8.4 0.0079 15.4 8.4 1.0 1 0 0 1 1 1 1 Myosin-like coiled-coil protein FlaC_arch PF05377.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.0096 16.3 6.7 0.076 13.4 1.8 2.1 1 1 1 2 2 2 2 Flagella accessory protein C (FlaC) Prefoldin_3 PF13758.6 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.017 15.2 4.0 0.021 14.9 3.8 1.3 1 1 0 1 1 1 0 Prefoldin subunit ATG16 PF08614.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.03 14.5 4.8 0.038 14.2 4.8 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) SpoIISA_toxin PF14171.6 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.065 12.9 3.2 0.072 12.8 3.2 1.0 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system HrpB7 PF09486.10 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.076 13.4 1.4 0.19 12.1 1.0 1.6 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) Atg14 PF10186.9 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.089 11.9 6.8 0.1 11.7 6.8 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FlgN PF05130.12 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.1 13.1 4.7 0.13 12.8 4.7 1.1 1 0 0 1 1 1 0 FlgN protein Laminin_II PF06009.12 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.14 12.2 6.7 0.15 12.0 6.7 1.0 1 0 0 1 1 1 0 Laminin Domain II KELK PF15796.5 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.18 12.3 9.5 0.71 10.4 9.5 1.9 1 1 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF641 PF04859.12 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.22 11.9 6.2 0.3 11.4 6.2 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF1664 PF07889.12 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.29 11.2 5.6 0.39 10.8 5.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.3 9.9 8.9 0.31 9.9 8.9 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF948 PF06103.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.59 10.4 4.2 0.86 9.9 4.2 1.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Bcr-Abl_Oligo PF09036.10 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 0.6 10.1 3.8 3.2 7.8 0.3 2.1 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain UPF0242 PF06785.11 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 1.9 8.6 9.3 2.1 8.4 9.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMPIT PF07851.13 NODE_69621_length_227_cov_2.656250_g61680_i0reverse_frame_1 - 2.6 7.2 6.2 3 7.0 6.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein WD40 PF00400.32 NODE_69620_length_227_cov_2.656250_g61679_i0forward_frame_1 - 2.4e-05 25.0 0.0 0.35 11.8 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_69620_length_227_cov_2.656250_g61679_i0forward_frame_1 - 0.00059 20.1 0.0 0.36 11.2 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain KRTAP PF11759.8 NODE_69616_length_227_cov_2.744792_g61675_i0reverse_frame_1 - 0.053 14.1 13.3 0.066 13.8 13.3 1.1 1 0 0 1 1 1 0 Keratin-associated matrix Keratin_B2_2 PF13885.6 NODE_69615_length_227_cov_2.812500_g61674_i0forward_frame_1 - 0.027 14.4 3.2 0.027 14.4 3.2 2.0 2 1 0 2 2 2 0 Keratin, high sulfur B2 protein Rh5 PF18515.1 NODE_69606_length_227_cov_3.041667_g61665_i0reverse_frame_1 - 0.12 11.6 0.0 0.15 11.4 0.0 1.0 1 0 0 1 1 1 0 Rh5 coiled-coil domain CKS PF01111.19 NODE_69601_length_227_cov_3.520833_g61660_i0forward_frame_1 - 9.6e-05 22.6 0.3 0.00015 21.9 0.3 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase regulatory subunit CxxCxxCC PF03692.15 NODE_69596_length_227_cov_4.463542_g61655_i0forward_frame_1 - 0.01 16.5 0.7 0.013 16.2 0.7 1.3 1 1 0 1 1 1 0 Putative zinc- or iron-chelating domain RPGR1_C PF18111.1 NODE_69592_length_227_cov_5.958333_g61651_i0forward_frame_1 - 0.0076 16.2 0.5 0.0086 16.0 0.5 1.1 1 0 0 1 1 1 1 Retinitis pigmentosa G-protein regulator interacting C-terminal SDF PF00375.18 NODE_69586_length_227_cov_26.000000_g61645_i0forward_frame_1 - 0.11 11.4 2.2 0.14 11.2 2.2 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family ABC2_membrane_3 PF12698.7 NODE_69586_length_227_cov_26.000000_g61645_i0forward_frame_1 - 10 5.1 11.1 11 5.0 11.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein CREPT PF16566.5 NODE_69583_length_227_cov_30.791667_g61642_i0forward_frame_1 - 0.016 15.4 0.2 0.019 15.1 0.2 1.1 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour IML1 PF12257.8 NODE_69583_length_227_cov_30.791667_g61642_i0forward_frame_1 - 0.02 14.0 0.2 0.021 14.0 0.2 1.1 1 0 0 1 1 1 0 Vacuolar membrane-associated protein Iml1 DUF1980 PF09323.10 NODE_69582_length_227_cov_30.828125_g61641_i0reverse_frame_1 - 0.77 9.7 2.9 0.88 9.5 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) TMEM138 PF14935.6 NODE_69581_length_227_cov_31.583333_g61640_i0reverse_frame_1 - 0.023 15.3 1.7 0.027 15.1 1.7 1.1 1 0 0 1 1 1 0 Transmembrane protein 138 Toxin_3 PF00537.18 NODE_69577_length_227_cov_36.390625_g61636_i0forward_frame_1 - 0.013 15.7 0.8 0.017 15.3 0.8 1.2 1 0 0 1 1 1 0 Scorpion toxin-like domain TPT PF03151.16 NODE_69577_length_227_cov_36.390625_g61636_i0forward_frame_1 - 0.066 12.5 0.0 0.074 12.4 0.0 1.0 1 0 0 1 1 1 0 Triose-phosphate Transporter family KIAA1430 PF13879.6 NODE_69575_length_227_cov_38.182292_g61634_i0forward_frame_1 - 0.0017 19.1 4.4 0.0019 18.9 4.4 1.2 1 0 0 1 1 1 1 KIAA1430 homologue FAM194 PF14977.6 NODE_69575_length_227_cov_38.182292_g61634_i0forward_frame_1 - 0.044 13.1 0.8 0.045 13.1 0.8 1.0 1 0 0 1 1 1 0 FAM194 protein MgtC PF02308.16 NODE_69573_length_227_cov_39.104167_g61632_i0reverse_frame_1 - 0.013 15.8 0.0 0.016 15.6 0.0 1.0 1 0 0 1 1 1 0 MgtC family Frizzled PF01534.17 NODE_69573_length_227_cov_39.104167_g61632_i0reverse_frame_1 - 0.18 10.8 0.0 0.18 10.8 0.0 1.1 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region Soyouz_module PF14313.6 NODE_69572_length_227_cov_39.182292_g61631_i0reverse_frame_1 - 0.046 13.5 0.1 0.065 13.0 0.1 1.2 1 0 0 1 1 1 0 N-terminal region of Paramyxovirinae phosphoprotein (P) DUF3649 PF12365.8 NODE_69561_length_227_cov_49.812500_g61620_i0forward_frame_1 - 0.0078 15.9 0.1 0.017 14.8 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3649) YuiB PF14068.6 NODE_69557_length_227_cov_52.145833_g61616_i0forward_frame_1 - 0.14 12.8 0.0 0.15 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative membrane protein YpmT PF17431.2 NODE_69551_length_227_cov_56.005208_g61610_i0reverse_frame_1 - 0.054 13.5 0.7 0.094 12.8 0.7 1.4 1 0 0 1 1 1 0 Uncharacterized YmpT-like Meckelin PF09773.9 NODE_69551_length_227_cov_56.005208_g61610_i0forward_frame_1 - 3.8 5.5 11.0 4.3 5.3 11.0 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) zinc-ribbons_6 PF07191.12 NODE_69550_length_227_cov_56.515625_g61609_i0forward_frame_1 - 0.0089 16.0 0.4 0.014 15.4 0.4 1.3 1 0 0 1 1 1 1 zinc-ribbons C1_1 PF00130.22 NODE_69550_length_227_cov_56.515625_g61609_i0forward_frame_1 - 0.017 15.0 0.9 0.024 14.5 0.9 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) HNH_5 PF14279.6 NODE_69550_length_227_cov_56.515625_g61609_i0forward_frame_1 - 0.044 13.6 2.3 0.77 9.7 0.2 2.2 1 1 1 2 2 2 0 HNH endonuclease DZR PF12773.7 NODE_69550_length_227_cov_56.515625_g61609_i0forward_frame_1 - 0.18 11.9 4.0 0.51 10.4 3.8 1.8 1 1 1 2 2 2 0 Double zinc ribbon PSCyt2 PF07583.11 NODE_69550_length_227_cov_56.515625_g61609_i0forward_frame_1 - 1.9 8.4 3.8 2.9 7.8 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1549) Cript PF10235.9 NODE_69546_length_227_cov_59.781250_g61605_i0forward_frame_1 - 0.024 15.2 8.4 0.032 14.8 8.4 1.2 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT DUF2883 PF11097.8 NODE_69533_length_227_cov_80.947917_g61592_i0forward_frame_1 - 0.068 13.3 0.0 0.78 9.9 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2883) Lamprin PF06403.11 NODE_69532_length_227_cov_83.468750_g61591_i0forward_frame_1 - 0.24 11.4 10.5 0.4 10.6 10.5 1.4 1 1 0 1 1 1 0 Lamprin TrbE PF11100.8 NODE_69531_length_227_cov_85.104167_g61590_i0reverse_frame_1 - 0.0064 16.7 2.1 0.01 16.1 2.1 1.3 1 0 0 1 1 1 1 Conjugal transfer protein TrbE Ank_2 PF12796.7 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 1.5e-13 51.1 0.0 1.8e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 7.3e-10 39.2 0.0 1.1e-09 38.6 0.0 1.3 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 6.2e-09 35.9 0.0 8.5e-05 22.8 0.0 2.1 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 6.5e-09 35.9 0.0 6.8e-05 23.1 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_3 PF13606.6 NODE_69530_length_227_cov_94.114583_g61589_i0forward_frame_1 - 3.4e-08 33.1 0.0 0.00011 22.4 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Roc PF08477.13 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 8.7e-08 32.4 0.0 1.2e-07 32.0 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 1.5e-06 27.9 0.0 2e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Ras family Arf PF00025.21 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 5.5e-05 22.7 0.0 6.4e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.0058 16.1 0.0 0.0068 15.8 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit FtsK_SpoIIIE PF01580.18 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.016 14.5 0.0 0.016 14.5 0.0 1.0 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_7 PF12775.7 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.018 14.6 0.0 0.02 14.4 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region TniB PF05621.11 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.024 14.0 0.0 0.026 14.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein Dynamin_N PF00350.23 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.063 13.3 0.0 0.086 12.9 0.0 1.2 1 0 0 1 1 1 0 Dynamin family T2SSE PF00437.20 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.099 11.7 0.0 0.1 11.6 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF4180 PF13788.6 NODE_69527_length_227_cov_113.031250_g61586_i0forward_frame_1 - 0.11 12.4 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4180) RCC1_2 PF13540.6 NODE_69524_length_227_cov_117.703125_g61583_i0forward_frame_1 - 0.00037 20.2 0.6 0.57 10.1 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PheRS_DBD2 PF18554.1 NODE_69524_length_227_cov_117.703125_g61583_i0forward_frame_1 - 6.2 6.9 7.9 14 5.7 1.2 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 DndB PF14072.6 NODE_69523_length_227_cov_117.890625_g61582_i0reverse_frame_1 - 0.033 13.4 0.1 0.036 13.3 0.1 1.0 1 0 0 1 1 1 0 DNA-sulfur modification-associated SPO11_like PF03533.14 NODE_69523_length_227_cov_117.890625_g61582_i0reverse_frame_1 - 0.14 12.3 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 SPO11 homologue LRR_9 PF14580.6 NODE_69523_length_227_cov_117.890625_g61582_i0forward_frame_1 - 0.083 12.4 0.3 0.098 12.2 0.3 1.0 1 0 0 1 1 1 0 Leucine-rich repeat GREB1 PF15782.5 NODE_69514_length_227_cov_202.505208_g61573_i0forward_frame_1 - 0.092 9.9 0.5 0.11 9.6 0.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer RseC_MucC PF04246.12 NODE_69513_length_227_cov_209.786458_g61572_i0forward_frame_1 - 0.024 14.6 0.6 0.03 14.3 0.6 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC SR-25 PF10500.9 NODE_69510_length_227_cov_247.729167_g61569_i0forward_frame_1 - 0.051 13.2 11.0 0.056 13.0 11.0 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein PolC_DP2 PF03833.13 NODE_69510_length_227_cov_247.729167_g61569_i0forward_frame_1 - 0.29 8.9 4.7 0.3 8.9 4.7 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 NOB1_Zn_bind PF08772.11 NODE_69510_length_227_cov_247.729167_g61569_i0forward_frame_1 - 0.48 10.6 8.8 0.64 10.2 8.8 1.1 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like UPF0020 PF01170.18 NODE_69508_length_227_cov_334.807292_g61567_i0forward_frame_1 - 7.7e-10 38.8 0.0 7.8e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 AviRa PF11599.8 NODE_69508_length_227_cov_334.807292_g61567_i0forward_frame_1 - 0.052 13.0 0.0 0.056 12.9 0.0 1.0 1 0 0 1 1 1 0 RRNA methyltransferase AviRa Methyltransf_11 PF08241.12 NODE_69508_length_227_cov_334.807292_g61567_i0forward_frame_1 - 0.096 13.3 0.2 0.17 12.5 0.2 1.6 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_69508_length_227_cov_334.807292_g61567_i0forward_frame_1 - 0.11 12.2 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Methyltransferase domain FNIP PF05725.12 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_1 - 1.4e-22 79.6 11.3 1.4e-11 44.3 1.5 2.0 2 0 0 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_1 - 4.8e-05 23.3 0.2 5.7e-05 23.1 0.2 1.2 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) Glyco_hydro_65C PF03633.15 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_1 - 0.035 14.0 0.9 31 4.6 0.0 3.6 4 0 0 4 4 4 0 Glycosyl hydrolase family 65, C-terminal domain LRR_11 PF18831.1 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_1 - 2.3 7.9 14.0 9.4 5.9 0.7 3.8 3 1 0 3 3 3 0 Leucine-rich repeat DUF1476 PF07345.11 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_1 - 0.17 12.3 3.1 27 5.2 0.1 3.0 1 1 2 3 3 3 0 ATPase inhibitor subunit zeta Glyco_transf_54 PF04666.13 NODE_69502_length_228_cov_0.823834_g61561_i0reverse_frame_1 - 0.0085 15.0 0.8 0.0092 14.9 0.8 1.0 1 0 0 1 1 1 1 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region Borrelia_orfD PF02999.14 NODE_69502_length_228_cov_0.823834_g61561_i0reverse_frame_1 - 0.07 13.4 0.2 0.1 12.9 0.2 1.3 1 0 0 1 1 1 0 Borrelia orf-D family Spt20 PF12090.8 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 0.082 12.5 16.2 0.087 12.4 16.2 1.0 1 0 0 1 1 1 0 Spt20 family Roughex PF06020.11 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 0.25 10.4 4.8 0.26 10.3 4.8 1.0 1 0 0 1 1 1 0 Drosophila roughex protein DUF2722 PF10846.8 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 0.6 9.0 12.5 0.58 9.0 12.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) TERB2 PF15101.6 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 3.4 7.7 8.3 3.2 7.7 8.3 1.0 1 0 0 1 1 1 0 Telomere-associated protein TERB2 TFIIA PF03153.13 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_1 - 4.6 7.1 15.9 4.4 7.2 15.9 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Snf7 PF03357.21 NODE_69497_length_228_cov_0.829016_g61556_i0reverse_frame_1 - 0.47 10.0 4.4 0.59 9.7 4.4 1.2 1 0 0 1 1 1 0 Snf7 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks352.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks352.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks352.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks352.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:23:21 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FAM70 PF14967.6 NODE_69485_length_228_cov_1.031088_g61544_i0forward_frame_1 - 0.065 12.7 0.5 0.072 12.5 0.5 1.0 1 0 0 1 1 1 0 FAM70 protein TIP39 PF14980.6 NODE_69485_length_228_cov_1.031088_g61544_i0forward_frame_1 - 0.18 11.7 0.1 0.27 11.2 0.1 1.2 1 0 0 1 1 1 0 TIP39 peptide oligo_HPY PF08352.12 NODE_69482_length_228_cov_1.036269_g61541_i0forward_frame_1 - 0.06 13.9 0.3 0.069 13.7 0.3 1.1 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region IL4Ra_N PF09238.10 NODE_69481_length_228_cov_1.046632_g61540_i0reverse_frame_1 - 0.006 16.9 5.6 0.0071 16.7 5.6 1.1 1 0 0 1 1 1 1 Interleukin-4 receptor alpha chain, N-terminal Prenylcys_lyase PF07156.14 NODE_69480_length_228_cov_1.056995_g61539_i0reverse_frame_1 - 0.12 11.5 0.1 0.12 11.5 0.1 1.0 1 0 0 1 1 1 0 Prenylcysteine lyase Pkinase PF00069.25 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 7.7e-23 81.2 0.3 8.2e-23 81.1 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 1.1e-17 64.3 0.1 1.1e-17 64.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.00017 21.6 0.0 0.00017 21.6 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.00092 18.1 0.2 0.00093 18.1 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.0012 18.2 0.0 0.0013 18.1 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.0029 16.6 0.0 0.0033 16.4 0.0 1.0 1 0 0 1 1 1 1 Haspin like kinase domain YrbL-PhoP_reg PF10707.9 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.0069 15.9 0.1 0.0075 15.8 0.1 1.1 1 0 0 1 1 1 1 PhoP regulatory network protein YrbL Choline_kinase PF01633.20 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.0074 15.9 0.1 0.011 15.3 0.2 1.3 1 1 0 1 1 1 1 Choline/ethanolamine kinase RIO1 PF01163.22 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.011 15.3 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 0 RIO1 family FTA2 PF13095.6 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.037 13.6 0.1 0.037 13.6 0.1 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Seadorna_VP7 PF07387.11 NODE_69478_length_228_cov_1.139896_g61537_i0forward_frame_1 - 0.062 12.3 0.1 0.065 12.3 0.1 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Enterotoxin_HS1 PF08090.11 NODE_69473_length_228_cov_1.186528_g61532_i0reverse_frame_1 - 0.019 14.9 0.4 0.14 12.2 0.2 2.0 2 0 0 2 2 2 0 Heat stable E.coli enterotoxin 1 DUF2753 PF10952.8 NODE_69467_length_228_cov_1.207254_g61526_i0reverse_frame_1 - 0.033 14.3 0.3 0.038 14.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2753) Oxidored_q4 PF00507.19 NODE_69466_length_228_cov_1.212435_g61525_i0reverse_frame_1 - 0.025 14.7 8.8 0.031 14.4 8.8 1.2 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DUF5337 PF17272.2 NODE_69466_length_228_cov_1.212435_g61525_i0reverse_frame_1 - 0.58 10.0 2.4 0.58 10.0 0.5 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5337) SID-1_RNA_chan PF13965.6 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 0.16 10.3 4.8 0.17 10.3 4.8 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Zip PF02535.22 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 0.2 10.8 4.6 0.22 10.7 4.6 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF4834 PF16118.5 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 0.21 12.6 6.9 0.29 12.1 6.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) MAP17 PF15807.5 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 0.26 11.5 4.9 0.27 11.5 4.9 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 MDFI PF15316.6 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 0.27 11.3 7.9 0.28 11.2 7.9 1.0 1 0 0 1 1 1 0 MyoD family inhibitor OATP PF03137.20 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 0.54 8.5 3.0 0.61 8.3 3.0 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family MMM1 PF10296.9 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 0.6 9.1 7.3 0.63 9.0 7.3 1.0 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Connexin PF00029.19 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 1 9.1 4.6 1.1 9.0 4.6 1.0 1 0 0 1 1 1 0 Connexin CLN3 PF02487.17 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 1.1 8.2 3.6 1.2 8.1 3.6 1.0 1 0 0 1 1 1 0 CLN3 protein CSG2 PF16965.5 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 1.5 7.7 3.9 1.5 7.7 3.9 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator Kei1 PF08552.11 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 2 8.3 4.0 2.1 8.2 4.0 1.1 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 Presenilin PF01080.17 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 3.3 6.4 10.9 3.4 6.3 10.9 1.1 1 0 0 1 1 1 0 Presenilin TMPIT PF07851.13 NODE_69466_length_228_cov_1.212435_g61525_i0forward_frame_1 - 3.8 6.7 7.4 4.1 6.6 7.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein DCP1 PF06058.13 NODE_69464_length_228_cov_1.227979_g61523_i0reverse_frame_1 - 0.03 14.3 0.4 0.035 14.0 0.4 1.1 1 0 0 1 1 1 0 Dcp1-like decapping family Adeno_PIX PF03955.14 NODE_69459_length_228_cov_1.238342_g61518_i0reverse_frame_1 - 0.46 10.7 10.4 0.55 10.4 10.4 1.2 1 0 0 1 1 1 0 Adenovirus hexon-associated protein (IX) Sporozoite_P67 PF05642.11 NODE_69459_length_228_cov_1.238342_g61518_i0reverse_frame_1 - 0.89 7.6 6.4 1 7.4 6.4 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen SSP160 PF06933.11 NODE_69459_length_228_cov_1.238342_g61518_i0reverse_frame_1 - 2.2 6.4 21.2 2.5 6.2 21.2 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Tic110 PF16940.5 NODE_69459_length_228_cov_1.238342_g61518_i0reverse_frame_1 - 2.7 6.4 4.0 2.8 6.3 4.0 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter TAF4 PF05236.14 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_1 - 0.77 9.4 14.8 0.82 9.4 14.8 1.0 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family DUF1635 PF07795.11 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_1 - 4.3 7.1 16.1 4.5 7.1 16.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) FAM199X PF15814.5 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_1 - 8.7 5.3 18.3 9 5.3 18.3 1.1 1 0 0 1 1 1 0 Protein family FAM199X RSRP PF17069.5 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_1 - 8.9 5.8 23.5 9.2 5.7 23.5 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 zf-TFIIIC PF12660.7 NODE_69457_length_228_cov_1.238342_g61516_i0reverse_frame_1 - 0.084 12.8 0.0 0.094 12.7 0.0 1.2 1 0 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex Matrilin_ccoil PF10393.9 NODE_69451_length_228_cov_1.243523_g61510_i0reverse_frame_1 - 0.23 11.3 0.3 0.33 10.8 0.3 1.2 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin MORN PF02493.20 NODE_69449_length_228_cov_1.243523_g61508_i0reverse_frame_1 - 2.4e-09 36.5 3.2 2.1e-05 24.1 0.6 2.4 2 0 0 2 2 2 2 MORN repeat Poxvirus_B22R_C PF13168.6 NODE_69443_length_228_cov_1.274611_g61502_i0reverse_frame_1 - 0.043 13.3 0.1 0.048 13.2 0.1 1.0 1 0 0 1 1 1 0 Poxvirus B22R protein C-terminal SKICH PF17751.1 NODE_69439_length_228_cov_1.310881_g61498_i0forward_frame_1 - 0.047 14.2 0.0 0.058 14.0 0.0 1.2 1 0 0 1 1 1 0 SKICH domain DUF3915 PF13054.6 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 0.00066 19.6 5.5 0.00073 19.5 5.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 0.13 10.6 13.2 0.13 10.5 13.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family Conotoxin PF02950.17 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 0.18 12.8 0.8 0.24 12.5 0.8 1.2 1 0 0 1 1 1 0 Conotoxin Phage_Gp23 PF10669.9 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 0.62 10.4 5.0 0.68 10.3 5.0 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) PRP38_assoc PF12871.7 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_1 - 5.6 7.6 20.5 8.5 7.1 20.5 1.3 1 0 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Ribosomal_S28e PF01200.18 NODE_69421_length_228_cov_1.445596_g61480_i0reverse_frame_1 - 0.14 12.2 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S28e YccF PF03733.13 NODE_69420_length_228_cov_1.445596_g61479_i0forward_frame_1 - 0.0078 16.9 0.0 0.012 16.3 0.0 1.3 1 0 0 1 1 1 1 Inner membrane component domain RPA_interact_C PF14768.6 NODE_69418_length_228_cov_1.450777_g61477_i0reverse_frame_1 - 0.027 15.0 1.1 0.041 14.5 1.1 1.4 1 1 0 1 1 1 0 Replication protein A interacting C-terminal DUF3431 PF11913.8 NODE_69417_length_228_cov_1.455959_g61476_i0reverse_frame_1 - 0.14 11.9 0.1 0.16 11.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3431) GlyL_C PF12524.8 NODE_69417_length_228_cov_1.455959_g61476_i0reverse_frame_1 - 0.17 12.1 2.0 0.3 11.3 2.0 1.5 1 1 0 1 1 1 0 dsDNA virus glycoprotein L C terminal Zn_peptidase_2 PF04298.12 NODE_69414_length_228_cov_1.481865_g61473_i0reverse_frame_1 - 0.47 9.8 2.4 0.49 9.8 2.4 1.1 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase DUF3987 PF13148.6 NODE_69406_length_228_cov_1.601036_g61465_i0reverse_frame_1 - 0.089 11.8 1.5 0.096 11.7 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Pox_A11 PF05061.13 NODE_69406_length_228_cov_1.601036_g61465_i0reverse_frame_1 - 0.12 11.6 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 Poxvirus A11 Protein PARP PF00644.20 NODE_69402_length_228_cov_1.621762_g61461_i0forward_frame_1 - 0.2 11.2 0.1 0.21 11.2 0.1 1.1 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain DNA_ligase_IV PF11411.8 NODE_69396_length_228_cov_1.647668_g61455_i0reverse_frame_1 - 0.53 10.5 2.3 1 9.5 2.3 1.4 1 0 0 1 1 1 0 DNA ligase IV YccF PF03733.13 NODE_69393_length_228_cov_1.709845_g61452_i0reverse_frame_1 - 2.3e-17 63.4 12.9 2.7e-17 63.2 12.9 1.1 1 0 0 1 1 1 1 Inner membrane component domain DUF5362 PF17319.2 NODE_69393_length_228_cov_1.709845_g61452_i0reverse_frame_1 - 0.0015 18.3 0.4 0.0017 18.2 0.4 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5362) DUF2207 PF09972.9 NODE_69393_length_228_cov_1.709845_g61452_i0reverse_frame_1 - 0.62 8.8 2.5 0.7 8.6 2.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ATE_C PF04377.15 NODE_69392_length_228_cov_1.715026_g61451_i0reverse_frame_1 - 0.15 12.7 0.0 0.15 12.6 0.0 1.1 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, C terminus RVT_1 PF00078.27 NODE_69389_length_228_cov_1.782383_g61448_i0forward_frame_1 - 1.3e-08 34.7 0.0 1.4e-08 34.5 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) RCC1 PF00415.18 NODE_69386_length_228_cov_1.839378_g61445_i0forward_frame_1 - 3.7e-14 53.1 0.0 5.3e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_69386_length_228_cov_1.839378_g61445_i0forward_frame_1 - 9e-06 25.4 1.0 0.0033 17.2 0.0 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF5465 PF17553.2 NODE_69382_length_228_cov_1.854922_g61441_i0forward_frame_1 - 3.8 8.3 9.6 7.6 7.4 0.4 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5465) TusA PF01206.17 NODE_69378_length_228_cov_1.870466_g61437_i0forward_frame_1 - 0.03 14.2 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 Sulfurtransferase TusA AAA_33 PF13671.6 NODE_69378_length_228_cov_1.870466_g61437_i0forward_frame_1 - 0.14 12.3 0.0 0.15 12.2 0.0 1.0 1 0 0 1 1 1 0 AAA domain Apo-CIII PF05778.12 NODE_69376_length_228_cov_1.911917_g61435_i0forward_frame_1 - 0.17 11.6 0.7 5.6 6.7 0.1 2.1 2 0 0 2 2 2 0 Apolipoprotein CIII (Apo-CIII) START PF01852.19 NODE_69374_length_228_cov_1.922280_g61433_i0forward_frame_1 - 0.0026 17.2 0.0 0.0032 16.9 0.0 1.1 1 0 0 1 1 1 1 START domain DUF4912 PF16258.5 NODE_69374_length_228_cov_1.922280_g61433_i0forward_frame_1 - 0.084 13.1 0.0 0.088 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4912) Imm10 PF15588.6 NODE_69371_length_228_cov_1.963731_g61430_i0reverse_frame_1 - 0.17 12.0 0.0 0.22 11.7 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 10 Neisseria_TspB PF05616.13 NODE_69362_length_228_cov_2.051813_g61421_i0reverse_frame_1 - 2.1 6.7 8.1 2.3 6.6 8.1 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Ephrin_rec_like PF07699.13 NODE_69358_length_228_cov_2.077720_g61417_i0forward_frame_1 - 4.5e-11 42.3 25.0 7.5e-06 25.6 7.3 2.8 1 1 0 2 2 2 2 Putative ephrin-receptor like NCD3G PF07562.14 NODE_69358_length_228_cov_2.077720_g61417_i0forward_frame_1 - 3.5e-05 23.7 15.7 0.0006 19.7 2.8 2.9 1 1 1 3 3 3 3 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_69358_length_228_cov_2.077720_g61417_i0forward_frame_1 - 0.013 15.9 15.7 24 5.4 8.6 4.0 1 1 1 2 2 2 0 TNFR/NGFR cysteine-rich region Metallothio_Euk PF12749.7 NODE_69358_length_228_cov_2.077720_g61417_i0forward_frame_1 - 9.3 6.5 23.9 6.3 7.0 9.1 2.1 1 1 1 2 2 2 0 Eukaryotic metallothionein RCSD PF05177.12 NODE_69355_length_228_cov_2.108808_g61414_i0reverse_frame_1 - 0.044 14.7 2.3 1.4 9.9 1.6 2.0 1 1 1 2 2 2 0 RCSD region Peptidase_C33 PF05412.12 NODE_69354_length_228_cov_2.113990_g61413_i0reverse_frame_1 - 0.024 14.6 0.3 0.027 14.5 0.3 1.1 1 0 0 1 1 1 0 Equine arterivirus Nsp2-type cysteine proteinase OAF PF14941.6 NODE_69354_length_228_cov_2.113990_g61413_i0forward_frame_1 - 0.023 14.2 2.8 0.026 14.0 2.8 1.0 1 0 0 1 1 1 0 Transcriptional regulator, Out at first Phage_BR0599 PF09356.10 NODE_69354_length_228_cov_2.113990_g61413_i0forward_frame_1 - 0.048 14.0 1.7 0.1 12.9 1.7 1.5 1 1 0 1 1 1 0 Phage conserved hypothetical protein BR0599 DUF1658 PF07871.11 NODE_69351_length_228_cov_2.160622_g61410_i0reverse_frame_1 - 0.063 13.2 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1658) ACT_3 PF10000.9 NODE_69340_length_228_cov_2.238342_g61399_i0reverse_frame_1 - 0.16 11.9 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 ACT domain CssAB PF16831.5 NODE_69339_length_228_cov_2.243523_g61398_i0reverse_frame_1 - 0.051 13.9 0.8 0.057 13.8 0.8 1.1 1 0 0 1 1 1 0 CS6 fimbrial subunits A and B, Coli surface antigen 6 zf_ZIC PF18366.1 NODE_69334_length_228_cov_2.279793_g61393_i0reverse_frame_1 - 0.053 13.6 0.1 0.068 13.3 0.1 1.2 1 0 0 1 1 1 0 Zic proteins zinc finger domain BNR_3 PF13859.6 NODE_69326_length_228_cov_2.404145_g61385_i0reverse_frame_1 - 0.086 12.1 0.0 0.086 12.1 0.0 1.1 1 0 0 1 1 1 0 BNR repeat-like domain ISP1_C PF18161.1 NODE_69321_length_228_cov_2.455959_g61380_i0reverse_frame_1 - 0.014 15.3 1.3 0.017 15.1 1.3 1.0 1 0 0 1 1 1 0 ISP1 C-terminal Headcase PF16002.5 NODE_69310_length_228_cov_2.880829_g61369_i0forward_frame_1 - 0.03 13.8 0.5 0.03 13.8 0.5 1.1 1 0 0 1 1 1 0 Headcase protein DASH_Dad2 PF08654.10 NODE_69307_length_228_cov_2.994819_g61366_i0reverse_frame_1 - 0.016 15.6 0.3 0.019 15.4 0.3 1.1 1 0 0 1 1 1 0 DASH complex subunit Dad2 DUF4642 PF15484.6 NODE_69307_length_228_cov_2.994819_g61366_i0reverse_frame_1 - 0.019 15.2 0.9 0.023 15.0 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4642) zf_C2H2_10 PF18414.1 NODE_69305_length_228_cov_3.051813_g61364_i0reverse_frame_1 - 0.078 12.5 0.3 0.15 11.6 0.3 1.4 1 0 0 1 1 1 0 C2H2 type zinc-finger MCC-bdg_PDZ PF10506.9 NODE_69305_length_228_cov_3.051813_g61364_i0forward_frame_1 - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF872 PF05915.12 NODE_69302_length_228_cov_3.108808_g61361_i0forward_frame_1 - 0.057 13.6 0.1 0.067 13.4 0.1 1.2 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) DUF2380 PF09533.10 NODE_69301_length_228_cov_3.145078_g61360_i0reverse_frame_1 - 0.027 14.1 3.6 0.032 13.9 3.6 1.1 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) DUF4928 PF16280.5 NODE_69299_length_228_cov_3.518135_g61358_i0forward_frame_1 - 0.15 11.3 0.1 0.16 11.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4928) Orexin PF02072.15 NODE_69290_length_228_cov_4.430052_g61349_i0forward_frame_1 - 0.11 12.5 0.5 0.13 12.2 0.5 1.1 1 0 0 1 1 1 0 Prepro-orexin DUF2670 PF10875.8 NODE_69276_length_228_cov_41.989637_g61335_i0reverse_frame_1 - 0.056 13.6 0.1 0.06 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) Hva1_TUDOR PF11160.8 NODE_69275_length_228_cov_43.606218_g61334_i0forward_frame_1 - 0.36 11.0 3.6 1.3 9.2 3.6 1.9 1 1 0 1 1 1 0 Hypervirulence associated proteins TUDOR domain Alpha_GJ PF03229.13 NODE_69271_length_228_cov_44.414508_g61330_i0reverse_frame_1 - 0.044 14.4 0.8 0.055 14.0 0.8 1.2 1 0 0 1 1 1 0 Alphavirus glycoprotein J DUF842 PF05811.13 NODE_69271_length_228_cov_44.414508_g61330_i0forward_frame_1 - 0.022 14.4 0.9 0.026 14.2 0.9 1.0 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) Viral_NABP PF05515.11 NODE_69260_length_228_cov_55.626943_g61319_i0reverse_frame_1 - 0.022 14.6 0.2 0.026 14.4 0.2 1.3 1 1 0 1 1 1 0 Viral nucleic acid binding CxC1 PF18802.1 NODE_69258_length_228_cov_56.932642_g61317_i0forward_frame_1 - 0.22 11.7 2.2 0.26 11.4 2.2 1.1 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases ECSCR PF15820.5 NODE_69256_length_228_cov_60.269430_g61315_i0forward_frame_1 - 0.073 12.9 0.3 0.074 12.9 0.3 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Orf78 PF06024.12 NODE_69256_length_228_cov_60.269430_g61315_i0forward_frame_1 - 0.69 10.2 4.8 0.59 10.5 4.2 1.4 1 1 0 1 1 1 0 Orf78 (ac78) zf-LITAF-like PF10601.9 NODE_69255_length_228_cov_60.554404_g61314_i0forward_frame_1 - 0.074 13.3 0.8 0.074 13.3 0.8 1.7 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain zf-P11 PF03854.14 NODE_69244_length_228_cov_69.932642_g61303_i0reverse_frame_1 - 0.21 11.2 0.0 0.28 10.9 0.0 1.3 1 0 0 1 1 1 0 P-11 zinc finger GAPT PF11770.8 NODE_69239_length_228_cov_103.113990_g61298_i0reverse_frame_1 - 0.057 13.3 0.1 0.065 13.1 0.1 1.1 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) RCR PF12273.8 NODE_69235_length_228_cov_122.227979_g61294_i0forward_frame_1 - 0.032 14.9 0.0 0.038 14.6 0.0 1.0 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red Microvir_J PF04726.13 NODE_69235_length_228_cov_122.227979_g61294_i0forward_frame_1 - 0.04 13.9 0.3 0.058 13.4 0.3 1.2 1 0 0 1 1 1 0 Microvirus J protein Phage_DsbA PF11126.8 NODE_69231_length_228_cov_139.523316_g61290_i0reverse_frame_1 - 0.023 14.9 0.1 0.031 14.5 0.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator DsbA DUF2016 PF09436.10 NODE_69230_length_228_cov_165.025907_g61289_i0forward_frame_1 - 0.029 14.2 0.0 0.043 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) SecE PF00584.20 NODE_69224_length_228_cov_253.259067_g61283_i0forward_frame_1 - 0.059 13.3 0.2 0.16 11.9 0.1 1.7 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex DUF5478 PF17572.2 NODE_69218_length_228_cov_432.544041_g61277_i0reverse_frame_1 - 0.095 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5478) FNIP PF05725.12 NODE_69217_length_228_cov_907.683938_g61276_i0reverse_frame_1 - 4.1e-22 78.1 10.7 1.2e-11 44.6 1.9 2.0 1 1 1 2 2 2 2 FNIP Repeat LRR_5 PF13306.6 NODE_69217_length_228_cov_907.683938_g61276_i0reverse_frame_1 - 0.023 14.6 0.1 0.028 14.4 0.1 1.2 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) KH_4 PF13083.6 NODE_69217_length_228_cov_907.683938_g61276_i0forward_frame_1 - 0.019 14.8 1.3 4.8 7.1 0.1 2.1 2 0 0 2 2 2 0 KH domain Matrilin_ccoil PF10393.9 NODE_69217_length_228_cov_907.683938_g61276_i0forward_frame_1 - 0.22 11.4 1.1 16 5.4 0.1 2.1 1 1 1 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin HEAT PF02985.22 NODE_69215_length_229_cov_0.819588_g61274_i0forward_frame_3 - 0.034 14.4 0.1 0.11 12.8 0.1 1.8 1 0 0 1 1 1 0 HEAT repeat DUF5583 PF17821.1 NODE_69215_length_229_cov_0.819588_g61274_i0forward_frame_2 - 0.05 13.6 0.2 0.1 12.6 0.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5583) ABC_tran PF00005.27 NODE_69214_length_229_cov_0.824742_g61273_i0reverse_frame_2 - 1.2e-07 32.3 0.0 1.2e-07 32.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter DUF2791 PF10923.8 NODE_69212_length_229_cov_0.824742_g61271_i0forward_frame_2 - 0.16 10.7 0.0 0.2 10.4 0.0 1.0 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) Phage_holin_3_5 PF16085.5 NODE_69211_length_229_cov_0.824742_g61270_i0forward_frame_2 - 0.04 14.1 1.9 0.044 13.9 1.9 1.1 1 0 0 1 1 1 0 Bacteriophage holin Hol, superfamily III Lep_receptor_Ig PF06328.11 NODE_69210_length_229_cov_0.824742_g61269_i0reverse_frame_3 - 0.061 13.3 0.7 0.069 13.1 0.7 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain DUF3135 PF11333.8 NODE_69210_length_229_cov_0.824742_g61269_i0reverse_frame_2 - 0.15 12.3 0.9 0.19 12.0 0.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3135) DUF2721 PF11026.8 NODE_69210_length_229_cov_0.824742_g61269_i0forward_frame_2 - 0.33 10.8 3.6 0.39 10.6 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Lamprin PF06403.11 NODE_69209_length_229_cov_0.840206_g61268_i0forward_frame_3 - 7.9 6.4 7.9 2.4 8.1 5.0 1.6 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_69209_length_229_cov_0.840206_g61268_i0forward_frame_2 - 0.0022 18.0 2.1 0.0023 17.9 2.1 1.1 1 0 0 1 1 1 1 Lamprin RVT_3 PF13456.6 NODE_69208_length_229_cov_0.865979_g61267_i0reverse_frame_3 - 0.1 12.4 0.1 2.1 8.1 0.1 2.0 1 1 1 2 2 2 0 Reverse transcriptase-like Glyphos_transf PF04464.14 NODE_69206_length_229_cov_0.917526_g61265_i0reverse_frame_3 - 0.0098 14.9 0.0 0.011 14.7 0.0 1.0 1 0 0 1 1 1 1 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase IL4Ra_N PF09238.10 NODE_69204_length_229_cov_0.922680_g61263_i0forward_frame_2 - 0.088 13.2 2.6 0.11 12.9 2.6 1.1 1 0 0 1 1 1 0 Interleukin-4 receptor alpha chain, N-terminal LRR_6 PF13516.6 NODE_69202_length_229_cov_0.927835_g61261_i0forward_frame_3 - 0.086 12.9 0.4 0.17 12.0 0.4 1.5 1 0 0 1 1 1 0 Leucine Rich repeat PIN_6 PF17146.4 NODE_69202_length_229_cov_0.927835_g61261_i0forward_frame_2 - 1.2e-06 28.9 0.0 2e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 PIN domain of ribonuclease DbpA PF03880.15 NODE_69201_length_229_cov_0.943299_g61260_i0reverse_frame_3 - 0.049 13.6 0.1 0.068 13.2 0.1 1.3 1 1 0 1 1 1 0 DbpA RNA binding domain FeThRed_B PF02943.15 NODE_69200_length_229_cov_0.979381_g61259_i0forward_frame_2 - 2.5 8.1 6.5 3.1 7.9 6.5 1.1 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain DUF1435 PF07256.12 NODE_69198_length_229_cov_1.020619_g61257_i0reverse_frame_2 - 0.014 15.5 0.2 0.022 14.9 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1435) Ponericin PF07442.11 NODE_69195_length_229_cov_1.025773_g61254_i0reverse_frame_2 - 0.17 11.9 0.5 0.28 11.2 0.5 1.3 1 0 0 1 1 1 0 Ponericin TT_ORF1 PF02956.14 NODE_69195_length_229_cov_1.025773_g61254_i0reverse_frame_2 - 8.3 5.0 16.3 8.8 4.9 16.3 1.0 1 0 0 1 1 1 0 TT viral orf 1 DUF5359 PF17313.2 NODE_69194_length_229_cov_1.030928_g61253_i0forward_frame_2 - 0.39 10.7 10.0 1.5 8.8 1.6 2.6 2 1 1 3 3 3 0 Family of unknown function (DUF5359) GIIM PF08388.11 NODE_69192_length_229_cov_1.072165_g61251_i0reverse_frame_2 - 0.074 13.1 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Group II intron, maturase-specific domain Toxin_14 PF07829.11 NODE_69189_length_229_cov_1.139175_g61248_i0forward_frame_2 - 4.5 7.3 11.4 0.53 10.3 4.3 2.3 2 0 0 2 2 2 0 Alpha-A conotoxin PIVA-like protein DUF2976 PF11190.8 NODE_69188_length_229_cov_1.149485_g61247_i0forward_frame_2 - 0.1 12.4 0.4 0.13 12.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) Sec62 PF03839.16 NODE_69188_length_229_cov_1.149485_g61247_i0forward_frame_2 - 3.4 7.1 4.4 4.3 6.8 4.4 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Elf1 PF05129.13 NODE_69187_length_229_cov_1.175258_g61246_i0reverse_frame_2 - 0.08 13.0 1.7 0.13 12.3 1.7 1.4 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like HEAT PF02985.22 NODE_69186_length_229_cov_1.180412_g61245_i0forward_frame_2 - 0.06 13.6 0.5 0.17 12.2 0.0 2.1 3 0 0 3 3 3 0 HEAT repeat MAT1 PF06391.13 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.0065 16.3 4.4 0.0073 16.2 4.4 1.0 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 MIF4G_like_2 PF09090.11 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.091 12.2 4.7 0.11 11.9 4.7 1.0 1 0 0 1 1 1 0 MIF4G like APG6_N PF17675.1 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.096 13.2 8.9 0.12 12.9 8.9 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region YabA PF06156.13 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.098 13.3 2.4 0.12 13.0 2.4 1.0 1 0 0 1 1 1 0 Initiation control protein YabA Fib_alpha PF08702.10 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.12 12.5 1.1 0.36 11.0 1.1 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Lipoprotein_20 PF13942.6 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.12 12.3 4.9 0.2 11.6 4.9 1.4 1 1 0 1 1 1 0 YfhG lipoprotein Spc24 PF08286.11 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.18 12.1 5.9 0.91 9.8 1.8 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 TBCA PF02970.16 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.18 12.1 6.6 1.3 9.4 1.7 2.1 1 1 0 2 2 2 0 Tubulin binding cofactor A GTP-bdg_M PF16360.5 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.29 11.8 7.5 4 8.1 0.6 2.2 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region cwf21 PF08312.12 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.43 10.8 4.7 2.2 8.5 4.8 2.2 1 1 0 1 1 1 0 cwf21 domain Sugarporin_N PF11471.8 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 0.67 10.0 13.5 3.1 7.8 0.4 2.2 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension KfrA_N PF11740.8 NODE_69176_length_229_cov_1.231959_g61235_i0forward_frame_2 - 2.3 8.9 13.4 5.9 7.6 13.4 1.6 1 1 0 1 1 1 0 Plasmid replication region DNA-binding N-term AA_permease_C PF13906.6 NODE_69175_length_229_cov_1.231959_g61234_i0reverse_frame_2 - 0.4 10.8 3.1 0.39 10.8 1.8 1.7 1 1 0 1 1 1 0 C-terminus of AA_permease Ion_trans PF00520.31 NODE_69175_length_229_cov_1.231959_g61234_i0forward_frame_2 - 8.5e-07 28.4 0.7 8.6e-07 28.4 0.7 1.0 1 0 0 1 1 1 1 Ion transport protein Tmemb_161AB PF10268.9 NODE_69175_length_229_cov_1.231959_g61234_i0forward_frame_2 - 0.072 11.7 0.3 0.079 11.6 0.3 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB RIC3 PF15361.6 NODE_69174_length_229_cov_1.237113_g61233_i0forward_frame_2 - 0.059 13.8 0.1 0.059 13.8 0.1 1.2 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 NiFe_hyd_SSU_C PF14720.6 NODE_69172_length_229_cov_1.237113_g61231_i0reverse_frame_2 - 0.025 15.0 1.6 0.03 14.7 1.6 1.2 1 0 0 1 1 1 0 NiFe/NiFeSe hydrogenase small subunit C-terminal Aa_trans PF01490.18 NODE_69171_length_229_cov_1.237113_g61230_i0forward_frame_3 - 0.00012 21.0 1.0 0.00012 21.0 1.0 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein ECH_2 PF16113.5 NODE_69168_length_229_cov_1.237113_g61227_i0reverse_frame_3 - 1.5e-15 57.6 0.0 1.5e-15 57.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 NODE_69168_length_229_cov_1.237113_g61227_i0reverse_frame_3 - 0.00063 19.1 0.0 0.00065 19.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Trp_leader1 PF08055.11 NODE_69167_length_229_cov_1.237113_g61226_i0reverse_frame_3 - 2 8.2 5.7 0.21 11.4 1.3 1.6 2 0 0 2 2 2 0 Tryptophan leader peptide CCER1 PF15482.6 NODE_69167_length_229_cov_1.237113_g61226_i0forward_frame_3 - 0.11 12.4 6.1 0.12 12.2 6.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 T4BSS_DotH_IcmK PF12293.8 NODE_69163_length_229_cov_1.252577_g61222_i0reverse_frame_3 - 0.17 11.1 0.0 0.18 11.0 0.0 1.1 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion DUF4520 PF15016.6 NODE_69161_length_229_cov_1.273196_g61220_i0reverse_frame_3 - 0.087 12.9 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4520) GPR15L PF15854.5 NODE_69161_length_229_cov_1.273196_g61220_i0reverse_frame_3 - 0.12 12.7 3.4 0.15 12.3 3.4 1.4 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 TPR_1 PF00515.28 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 3.4e-06 26.6 0.8 8.2e-06 25.4 0.7 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 0.00033 20.5 0.2 0.00056 19.8 0.2 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 0.0017 18.4 0.4 0.0026 17.9 0.4 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat MIT PF04212.18 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 0.0058 16.7 0.2 0.008 16.2 0.2 1.2 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain TPR_12 PF13424.6 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 0.016 15.5 0.0 0.021 15.1 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_69156_length_229_cov_1.304124_g61215_i0reverse_frame_2 - 7.1 6.4 7.0 0.83 9.4 0.3 2.6 3 1 0 3 3 3 0 TPR repeat DnaB PF00772.21 NODE_69155_length_229_cov_1.309278_g61214_i0reverse_frame_3 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 DnaB-like helicase N terminal domain C2 PF00168.30 NODE_69149_length_229_cov_1.371134_g61208_i0forward_frame_3 - 1.6e-10 41.2 0.1 1.9e-10 40.9 0.1 1.1 1 0 0 1 1 1 1 C2 domain RELT PF12606.8 NODE_69143_length_229_cov_1.402062_g61202_i0reverse_frame_2 - 0.18 10.8 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 PRA1 PF03208.19 NODE_69143_length_229_cov_1.402062_g61202_i0forward_frame_3 - 0.56 9.8 7.4 0.59 9.8 7.4 1.1 1 0 0 1 1 1 0 PRA1 family protein UPF0182 PF03699.13 NODE_69143_length_229_cov_1.402062_g61202_i0forward_frame_3 - 1.1 7.3 4.2 1.1 7.2 4.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) LPD24 PF18839.1 NODE_69138_length_229_cov_1.412371_g61197_i0reverse_frame_3 - 0.056 13.7 0.5 0.073 13.3 0.5 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 24 CNOT1_HEAT PF16418.5 NODE_69138_length_229_cov_1.412371_g61197_i0reverse_frame_2 - 0.12 12.4 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat DUF1419 PF07215.11 NODE_69134_length_229_cov_1.474227_g61193_i0reverse_frame_2 - 0.12 12.5 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1419) MatP PF06303.12 NODE_69134_length_229_cov_1.474227_g61193_i0forward_frame_2 - 0.053 14.1 1.2 0.06 13.9 1.2 1.1 1 0 0 1 1 1 0 MatP N-terminal domain ThrE PF06738.12 NODE_69134_length_229_cov_1.474227_g61193_i0forward_frame_2 - 0.14 11.5 0.9 0.15 11.4 0.9 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter FHA PF00498.26 NODE_69131_length_229_cov_1.479381_g61190_i0reverse_frame_3 - 7.8e-05 22.9 0.1 9.9e-05 22.6 0.1 1.3 1 1 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_69131_length_229_cov_1.479381_g61190_i0reverse_frame_3 - 0.068 13.5 0.0 0.07 13.4 0.0 1.2 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain CDKN3 PF05706.12 NODE_69130_length_229_cov_1.494845_g61189_i0reverse_frame_2 - 0.016 14.9 0.1 0.019 14.6 0.1 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Abhydro_lipase PF04083.16 NODE_69130_length_229_cov_1.494845_g61189_i0forward_frame_3 - 3.8e-13 48.8 0.1 5.5e-13 48.3 0.1 1.2 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region PDGF PF00341.17 NODE_69122_length_229_cov_1.561856_g61181_i0forward_frame_2 - 0.1 12.9 0.1 0.14 12.5 0.1 1.2 1 0 0 1 1 1 0 PDGF/VEGF domain DUF1347 PF07079.11 NODE_69120_length_229_cov_1.608247_g61179_i0reverse_frame_3 - 0.0022 16.6 0.1 0.0023 16.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1347) p450 PF00067.22 NODE_69120_length_229_cov_1.608247_g61179_i0reverse_frame_2 - 0.005 15.6 0.0 0.0058 15.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 zf-RING_2 PF13639.6 NODE_69120_length_229_cov_1.608247_g61179_i0forward_frame_3 - 0.11 12.9 3.8 0.16 12.3 3.8 1.3 1 0 0 1 1 1 0 Ring finger domain TRAM_LAG1_CLN8 PF03798.16 NODE_69118_length_229_cov_1.613402_g61177_i0forward_frame_2 - 2.4e-08 33.9 7.7 2.6e-08 33.9 7.7 1.0 1 0 0 1 1 1 1 TLC domain ATP-synt_C PF00137.21 NODE_69114_length_229_cov_1.634021_g61173_i0reverse_frame_3 - 0.13 12.7 2.0 9.4 6.7 0.5 2.2 2 0 0 2 2 2 0 ATP synthase subunit C cNMP_binding PF00027.29 NODE_69111_length_229_cov_1.634021_g61170_i0forward_frame_3 - 2.4e-07 30.7 0.0 2.5e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain NosD PF05048.13 NODE_69109_length_229_cov_1.639175_g61168_i0reverse_frame_3 - 1.8e-09 37.2 6.2 1.9e-09 37.1 6.2 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 NODE_69109_length_229_cov_1.639175_g61168_i0reverse_frame_3 - 4.7e-08 33.0 7.1 5.2e-08 32.9 7.1 1.1 1 0 0 1 1 1 1 Right handed beta helix region DUF1565 PF07602.11 NODE_69109_length_229_cov_1.639175_g61168_i0reverse_frame_3 - 0.0028 17.0 2.1 0.004 16.5 2.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1565) 2TM PF13239.6 NODE_69101_length_229_cov_1.649485_g61160_i0reverse_frame_3 - 0.033 14.5 0.1 0.039 14.3 0.1 1.2 1 1 0 1 1 1 0 2TM domain DUF2572 PF10833.8 NODE_69099_length_229_cov_1.654639_g61158_i0forward_frame_3 - 0.0051 16.6 3.8 0.0058 16.4 3.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2572) RNase_H PF00075.24 NODE_69098_length_229_cov_1.659794_g61157_i0reverse_frame_2 - 1e-06 29.0 0.1 1.3e-06 28.7 0.1 1.1 1 0 0 1 1 1 1 RNase H U71 PF17474.2 NODE_69097_length_229_cov_1.695876_g61156_i0reverse_frame_2 - 5.8 6.9 9.6 1.6 8.7 4.2 2.1 2 0 0 2 2 2 0 Tegument protein UL11 homolog PAN_2 PF08276.11 NODE_69096_length_229_cov_1.695876_g61155_i0forward_frame_2 - 0.00075 19.6 0.4 0.00086 19.4 0.4 1.2 1 0 0 1 1 1 1 PAN-like domain MarC PF01914.17 NODE_69094_length_229_cov_1.716495_g61153_i0reverse_frame_3 - 0.049 13.0 0.9 0.058 12.8 0.9 1.1 1 0 0 1 1 1 0 MarC family integral membrane protein NIL PF09383.10 NODE_69094_length_229_cov_1.716495_g61153_i0reverse_frame_2 - 8.3e-15 54.4 0.1 9e-15 54.3 0.1 1.0 1 0 0 1 1 1 1 NIL domain HPS3_N PF14761.6 NODE_69093_length_229_cov_1.731959_g61152_i0reverse_frame_3 - 0.038 13.5 0.1 0.039 13.5 0.1 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3 PEPcase PF00311.17 NODE_69092_length_229_cov_1.747423_g61151_i0reverse_frame_3 - 0.0054 14.9 0.2 0.0054 14.9 0.2 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase RNase_P_p30 PF01876.16 NODE_69092_length_229_cov_1.747423_g61151_i0reverse_frame_3 - 0.042 13.3 0.0 0.046 13.2 0.0 1.0 1 0 0 1 1 1 0 RNase P subunit p30 zf-C3HC4_5 PF17121.5 NODE_69091_length_229_cov_1.757732_g61150_i0reverse_frame_2 - 0.025 14.4 0.0 0.048 13.6 0.0 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Vitellogenin_N PF01347.22 NODE_69082_length_229_cov_1.804124_g61141_i0reverse_frame_2 - 0.019 13.4 0.0 0.022 13.2 0.0 1.0 1 0 0 1 1 1 0 Lipoprotein amino terminal region PRNT PF15174.6 NODE_69074_length_229_cov_1.850515_g61133_i0reverse_frame_2 - 0.0018 18.3 0.4 0.0028 17.6 0.4 1.3 1 0 0 1 1 1 1 Prion-related protein testis-specific Ribosomal_L20 PF00453.18 NODE_69066_length_229_cov_1.912371_g61125_i0forward_frame_3 - 5.6e-07 29.6 0.1 1e-06 28.7 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L20 Suv3_N PF18114.1 NODE_69064_length_229_cov_1.917526_g61123_i0reverse_frame_3 - 0.23 11.6 2.6 0.26 11.4 2.6 1.0 1 0 0 1 1 1 0 Suv3 helical N-terminal domain MutS_I PF01624.20 NODE_69064_length_229_cov_1.917526_g61123_i0forward_frame_3 - 0.0097 16.1 3.4 0.026 14.8 3.4 1.6 1 1 0 1 1 1 1 MutS domain I Pkinase_fungal PF17667.1 NODE_69061_length_229_cov_1.943299_g61120_i0forward_frame_2 - 0.043 12.6 0.0 0.054 12.3 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase RPW8 PF05659.11 NODE_69058_length_229_cov_2.005155_g61117_i0reverse_frame_2 - 0.035 13.8 0.4 0.038 13.7 0.4 1.0 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF4522 PF15022.6 NODE_69058_length_229_cov_2.005155_g61117_i0forward_frame_3 - 0.23 11.7 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) Fusion_F0 PF13044.6 NODE_69057_length_229_cov_2.015464_g61116_i0forward_frame_3 - 0.022 13.4 0.2 0.022 13.4 0.2 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0, Isavirus DUF4798 PF16055.5 NODE_69055_length_229_cov_2.030928_g61114_i0forward_frame_2 - 0.027 14.7 4.4 0.032 14.5 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4798) TMEM187 PF15100.6 NODE_69050_length_229_cov_2.061856_g61109_i0forward_frame_3 - 0.018 14.6 0.1 0.019 14.6 0.1 1.0 1 0 0 1 1 1 0 TMEM187 protein family DUF1287 PF06940.11 NODE_69047_length_229_cov_2.097938_g61106_i0forward_frame_3 - 0.25 11.0 0.5 0.29 10.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1287) SpoVAD PF07451.11 NODE_69047_length_229_cov_2.097938_g61106_i0forward_frame_3 - 0.42 9.3 3.0 0.11 11.2 0.4 1.3 2 0 0 2 2 2 0 Stage V sporulation protein AD (SpoVAD) Aa_trans PF01490.18 NODE_69045_length_229_cov_2.164948_g61104_i0forward_frame_2 - 0.0041 15.9 0.3 0.0041 15.9 0.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Herpes_UL24 PF01646.16 NODE_69043_length_229_cov_2.195876_g61102_i0reverse_frame_2 - 0.055 13.4 0.1 0.065 13.2 0.1 1.0 1 0 0 1 1 1 0 Herpes virus proteins UL24 and UL76 Mfp-3 PF04202.13 NODE_69041_length_229_cov_2.201031_g61100_i0forward_frame_2 - 2.3 8.6 5.8 3.2 8.2 5.8 1.3 1 0 0 1 1 1 0 Foot protein 3 TMEM82 PF15816.5 NODE_69039_length_229_cov_2.231959_g61098_i0forward_frame_3 - 0.0033 16.4 6.7 0.0039 16.2 6.7 1.0 1 0 0 1 1 1 1 Transmembrane protein 82 Phage_holin_3_1 PF05106.12 NODE_69038_length_229_cov_2.237113_g61097_i0forward_frame_2 - 0.056 13.9 0.3 0.068 13.6 0.3 1.1 1 0 0 1 1 1 0 Phage holin family (Lysis protein S) Herpes_UL4 PF03277.13 NODE_69038_length_229_cov_2.237113_g61097_i0forward_frame_2 - 0.14 11.8 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL4 family DUF3270 PF11674.8 NODE_69037_length_229_cov_2.237113_g61096_i0reverse_frame_3 - 0.75 10.0 2.8 0.97 9.7 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF1514 PF07438.11 NODE_69037_length_229_cov_2.237113_g61096_i0reverse_frame_3 - 1.5 8.8 9.7 2.2 8.2 2.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1514) DUF2701 PF10857.8 NODE_69037_length_229_cov_2.237113_g61096_i0reverse_frame_3 - 3.5 7.7 7.3 7.5 6.7 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2701) DUF1514 PF07438.11 NODE_69037_length_229_cov_2.237113_g61096_i0reverse_frame_2 - 1.1 9.1 5.6 9.6 6.2 5.6 2.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1514) ATP_bind_1 PF03029.17 NODE_69036_length_229_cov_2.268041_g61095_i0reverse_frame_3 - 0.12 12.2 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Herpes_UL52 PF03121.15 NODE_69036_length_229_cov_2.268041_g61095_i0reverse_frame_2 - 0.019 14.9 0.3 0.041 13.8 0.1 1.6 2 0 0 2 2 2 0 Herpesviridae UL52/UL70 DNA primase Bunya_NS-S PF01104.17 NODE_69033_length_229_cov_2.345361_g61092_i0reverse_frame_3 - 0.021 14.6 0.2 0.034 13.9 0.2 1.3 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s Ints3 PF10189.9 NODE_69033_length_229_cov_2.345361_g61092_i0reverse_frame_2 - 3.9e-13 49.2 0.1 4e-13 49.2 0.1 1.0 1 0 0 1 1 1 1 Integrator complex subunit 3 Spem1 PF15670.5 NODE_69029_length_229_cov_2.463918_g61088_i0forward_frame_2 - 0.51 9.9 4.7 1.3 8.6 4.7 1.6 1 1 0 1 1 1 0 Spermatid maturation protein 1 CitT PF12431.8 NODE_69028_length_229_cov_2.484536_g61087_i0reverse_frame_3 - 7.3 7.1 5.8 3.7 8.0 0.2 2.5 2 1 1 3 3 3 0 Transcriptional regulator DUF249 PF03158.13 NODE_69027_length_229_cov_2.525773_g61086_i0forward_frame_2 - 0.07 12.8 0.2 0.072 12.8 0.2 1.1 1 0 0 1 1 1 0 Multigene family 530 protein cNMP_binding PF00027.29 NODE_69023_length_229_cov_2.695876_g61082_i0reverse_frame_2 - 0.0021 18.1 0.0 0.0033 17.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Whib PF02467.16 NODE_69022_length_229_cov_2.706186_g61081_i0reverse_frame_2 - 0.0015 19.0 0.5 0.0025 18.4 0.5 1.3 1 0 0 1 1 1 1 Transcription factor WhiB DUF2949 PF11165.8 NODE_69017_length_229_cov_3.237113_g61076_i0reverse_frame_2 - 0.16 12.3 1.0 0.33 11.3 0.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2949) SSP160 PF06933.11 NODE_69016_length_229_cov_3.283505_g61075_i0reverse_frame_3 - 0.2 9.8 11.9 0.21 9.8 11.9 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 FSA_C PF10479.9 NODE_69016_length_229_cov_3.283505_g61075_i0forward_frame_3 - 8.4 4.4 9.9 8.8 4.3 9.9 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus DUF202 PF02656.15 NODE_69015_length_229_cov_3.329897_g61074_i0reverse_frame_3 - 0.62 10.5 4.5 0.92 10.0 4.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF202) Imm43 PF15570.6 NODE_69014_length_229_cov_3.402062_g61073_i0reverse_frame_2 - 0.058 13.4 0.1 0.067 13.2 0.1 1.1 1 0 0 1 1 1 0 Immunity protein 43 Bac_transf PF02397.16 NODE_69013_length_229_cov_3.505155_g61072_i0reverse_frame_2 - 8e-18 64.7 0.0 8.1e-18 64.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial sugar transferase zf-C2HC5 PF06221.13 NODE_69012_length_229_cov_3.510309_g61071_i0forward_frame_2 - 0.02 14.9 6.5 0.029 14.4 6.5 1.3 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type RIF5_SNase_1 PF18187.1 NODE_69011_length_229_cov_3.530928_g61070_i0reverse_frame_3 - 0.14 11.9 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 TbRIF5 SNase domain 1 Aminotran_1_2 PF00155.21 NODE_69010_length_229_cov_3.556701_g61069_i0forward_frame_2 - 0.00035 19.9 0.0 0.00037 19.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Flg_bb_rod PF00460.20 NODE_69006_length_229_cov_4.180412_g61065_i0reverse_frame_3 - 3.6 7.6 4.9 16 5.6 0.3 2.3 2 0 0 2 2 2 0 Flagella basal body rod protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks353.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks353.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks353.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks353.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LAL_C2 PF18603.1 NODE_69006_length_229_cov_4.180412_g61065_i0forward_frame_3 - 0.44 10.7 3.8 0.24 11.6 0.6 1.9 1 1 1 2 2 2 0 L-amino acid ligase C-terminal domain 2 Fer4_10 PF13237.6 NODE_69006_length_229_cov_4.180412_g61065_i0forward_frame_2 - 0.28 11.3 9.5 0.45 10.7 9.5 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain FpoO PF10621.9 NODE_69006_length_229_cov_4.180412_g61065_i0forward_frame_2 - 0.33 11.3 5.5 0.49 10.7 5.5 1.2 1 0 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO Fer4 PF00037.27 NODE_69006_length_229_cov_4.180412_g61065_i0forward_frame_2 - 2.1 8.3 11.5 2.3 8.2 1.8 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain MSG PF02349.15 NODE_69004_length_229_cov_4.747423_g61063_i0reverse_frame_2 - 0.058 13.6 0.3 0.073 13.3 0.3 1.1 1 0 0 1 1 1 0 Major surface glycoprotein DUF2417 PF10329.9 NODE_68998_length_229_cov_31.932990_g61057_i0reverse_frame_3 - 0.1 12.0 2.7 0.11 11.8 2.7 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) NMT_C PF02799.15 NODE_68996_length_229_cov_36.288660_g61055_i0reverse_frame_3 - 0.017 14.7 0.2 0.017 14.6 0.2 1.1 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain zf-C3HC4_3 PF13920.6 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 2.3e-07 30.5 2.5 3.6e-07 29.9 2.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 4.8e-06 26.8 4.7 6.8e-06 26.3 4.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 2.3e-05 24.1 4.1 3.5e-05 23.6 4.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 5.2e-05 23.0 3.9 9.2e-05 22.2 3.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.0001 22.1 2.0 0.00016 21.5 2.0 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.00011 22.4 4.3 0.00018 21.7 4.3 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zinc-ribbons_6 PF07191.12 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.0066 16.4 0.3 0.008 16.1 0.3 1.2 1 0 0 1 1 1 1 zinc-ribbons DZR PF12773.7 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.0091 16.0 0.4 0.013 15.5 0.4 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-C3HC4_4 PF15227.6 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.014 15.5 4.2 0.036 14.2 4.3 1.6 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Baculo_RING PF05883.11 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.016 15.2 2.5 0.018 15.0 2.5 1.1 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-RING_5 PF14634.6 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.024 14.6 3.8 0.042 13.8 3.8 1.4 1 0 0 1 1 1 0 zinc-RING finger domain HypA PF01155.19 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.041 13.9 0.4 0.052 13.6 0.4 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RING_4 PF14570.6 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.042 13.7 3.5 0.061 13.1 3.5 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF1258 PF06869.12 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.048 13.1 0.2 0.048 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) zf-RING_UBOX PF13445.6 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 0.14 12.3 5.5 0.44 10.6 5.5 1.8 1 1 1 2 2 2 0 RING-type zinc-finger IBR PF01485.21 NODE_68995_length_229_cov_36.577320_g61054_i0reverse_frame_2 - 6.9 7.0 11.0 2.4 8.5 7.5 2.0 2 1 1 3 3 3 0 IBR domain, a half RING-finger domain SelP_N PF04592.14 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 0.29 10.5 30.3 0.29 10.5 30.3 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region DUF3306 PF11748.8 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 0.48 11.3 13.8 0.56 11.1 13.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3306) RR_TM4-6 PF06459.12 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 3.1 7.5 12.9 3.2 7.5 12.9 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 OATP PF03137.20 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 4.5 5.4 11.3 5.3 5.2 11.3 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Pex14_N PF04695.13 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 5.4 7.7 20.0 5.7 7.6 20.0 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Presenilin PF01080.17 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 6.4 5.4 17.5 6.7 5.4 17.5 1.0 1 0 0 1 1 1 0 Presenilin BORG_CEP PF14957.6 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 7.8 7.7 11.8 8.6 7.5 11.8 1.1 1 0 0 1 1 1 0 Cdc42 effector DUF4638 PF15472.6 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_3 - 9.2 5.9 14.4 9.5 5.9 14.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4638) PRIMA1 PF16101.5 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 0.0012 18.9 3.0 0.0012 18.8 3.0 1.1 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 0.0082 15.7 4.2 0.0088 15.6 4.2 1.1 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 0.089 12.9 3.0 0.087 12.9 3.0 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator Mucin PF01456.17 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 0.11 12.5 28.4 0.12 12.4 28.4 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein MGC-24 PF05283.11 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 0.43 11.0 13.1 0.46 10.9 13.1 1.2 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF844 PF05815.11 NODE_68992_length_229_cov_36.958763_g61051_i0reverse_frame_2 - 1.4 8.1 3.8 1.6 7.9 3.8 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF844) DUF1118 PF06549.12 NODE_68992_length_229_cov_36.958763_g61051_i0forward_frame_2 - 0.21 11.9 6.4 0.27 11.6 6.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1118) Med26 PF08711.11 NODE_68976_length_229_cov_50.505155_g61035_i0reverse_frame_3 - 0.00047 20.1 0.3 0.00075 19.5 0.3 1.3 1 0 0 1 1 1 1 TFIIS helical bundle-like domain OmdA PF13376.6 NODE_68974_length_229_cov_51.149485_g61033_i0reverse_frame_2 - 0.1 12.7 0.2 0.17 11.9 0.2 1.4 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated AbfB PF05270.13 NODE_68969_length_229_cov_56.520619_g61028_i0reverse_frame_2 - 0.063 13.3 0.1 0.54 10.2 0.0 1.9 1 1 1 2 2 2 0 Alpha-L-arabinofuranosidase B (ABFB) domain DUF4454 PF14628.6 NODE_68968_length_229_cov_59.427835_g61027_i0forward_frame_2 - 0.024 14.5 0.0 0.025 14.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4454) bacHORMA_2 PF18173.1 NODE_68968_length_229_cov_59.427835_g61027_i0forward_frame_2 - 0.077 12.8 0.0 0.087 12.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial HORMA domain 2 MCR_D PF02505.14 NODE_68967_length_229_cov_59.943299_g61026_i0reverse_frame_3 - 0.00039 20.3 0.1 0.00041 20.2 0.1 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D DinI PF06183.13 NODE_68967_length_229_cov_59.943299_g61026_i0reverse_frame_2 - 0.033 14.5 0.1 0.047 14.0 0.1 1.4 1 1 0 1 1 1 0 DinI-like family DUF2985 PF11204.8 NODE_68967_length_229_cov_59.943299_g61026_i0forward_frame_3 - 0.62 10.3 6.1 0.36 11.0 1.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2985) MGS PF02142.22 NODE_68965_length_229_cov_62.221649_g61024_i0forward_frame_2 - 0.083 13.1 0.0 0.098 12.9 0.0 1.0 1 0 0 1 1 1 0 MGS-like domain DUF4821 PF16092.5 NODE_68963_length_229_cov_63.582474_g61022_i0forward_frame_2 - 0.12 11.9 0.1 0.13 11.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4821) Prot_inhib_II PF02428.15 NODE_68959_length_229_cov_77.329897_g61018_i0reverse_frame_3 - 0.0091 16.4 0.4 0.015 15.8 0.4 1.3 1 0 0 1 1 1 1 Potato type II proteinase inhibitor family ERF PF04404.12 NODE_68956_length_229_cov_82.319588_g61015_i0reverse_frame_3 - 0.018 14.9 0.8 0.023 14.6 0.8 1.2 1 0 0 1 1 1 0 ERF superfamily Pep1_7 PF17232.2 NODE_68956_length_229_cov_82.319588_g61015_i0forward_frame_2 - 0.054 14.0 0.4 0.083 13.4 0.4 1.3 1 0 0 1 1 1 0 Elicitor peptide 1-7 EspF PF04806.12 NODE_68953_length_229_cov_92.778351_g61012_i0reverse_frame_3 - 0.022 15.2 3.8 0.029 14.8 3.8 1.2 1 0 0 1 1 1 0 EspF protein repeat RNA_bind PF08675.11 NODE_68950_length_229_cov_94.989691_g61009_i0reverse_frame_2 - 0.13 12.3 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 RNA binding domain TGT PF01702.18 NODE_68950_length_229_cov_94.989691_g61009_i0forward_frame_2 - 2.7e-20 72.8 4.4 3.3e-20 72.5 4.4 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase Prok-RING_2 PF14445.6 NODE_68948_length_229_cov_125.649485_g61007_i0forward_frame_2 - 0.075 13.2 0.3 0.075 13.2 0.3 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 2 GlgX_C PF18390.1 NODE_68947_length_229_cov_130.242268_g61006_i0reverse_frame_3 - 0.16 11.8 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Glycogen debranching enzyme C-terminal domain Yos1 PF08571.10 NODE_68946_length_229_cov_131.427835_g61005_i0reverse_frame_3 - 0.015 15.5 0.0 0.017 15.4 0.0 1.1 1 0 0 1 1 1 0 Yos1-like DUF2647 PF10839.8 NODE_68946_length_229_cov_131.427835_g61005_i0reverse_frame_3 - 0.039 14.0 0.5 0.072 13.2 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2647) Lustrin_cystein PF14625.6 NODE_68944_length_229_cov_132.376289_g61003_i0reverse_frame_3 - 0.038 14.4 1.3 0.07 13.5 1.3 1.4 1 0 0 1 1 1 0 Lustrin, cysteine-rich repeated domain SWIM PF04434.17 NODE_68944_length_229_cov_132.376289_g61003_i0reverse_frame_2 - 2.8e-08 33.3 0.1 4.6e-08 32.6 0.1 1.4 1 0 0 1 1 1 1 SWIM zinc finger VESA1_N PF12785.7 NODE_68944_length_229_cov_132.376289_g61003_i0forward_frame_3 - 0.097 11.6 6.9 0.11 11.5 6.9 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 AOX PF01786.17 NODE_68943_length_229_cov_139.396907_g61002_i0forward_frame_3 - 0.68 9.5 1.9 0.82 9.2 1.9 1.1 1 0 0 1 1 1 0 Alternative oxidase zf-C3HC4_3 PF13920.6 NODE_68941_length_229_cov_146.206186_g61000_i0reverse_frame_2 - 0.028 14.3 0.2 0.039 13.8 0.2 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Tweety PF04906.13 NODE_68935_length_229_cov_207.123711_g60994_i0forward_frame_3 - 0.023 13.3 0.5 0.028 13.1 0.5 1.1 1 0 0 1 1 1 0 Tweety zinc_ribbon_12 PF11331.8 NODE_68935_length_229_cov_207.123711_g60994_i0forward_frame_2 - 0.096 12.5 0.8 0.16 11.8 0.8 1.4 1 0 0 1 1 1 0 Probable zinc-ribbon domain DHODB_Fe-S_bind PF10418.9 NODE_68930_length_229_cov_267.113402_g60989_i0reverse_frame_3 - 0.0047 16.7 2.9 0.0047 16.7 2.9 1.7 2 0 0 2 2 2 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B zf-C2HC5 PF06221.13 NODE_68928_length_229_cov_295.701031_g60987_i0reverse_frame_3 - 0.32 11.0 5.9 1.4 8.9 0.4 2.2 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type Zap1_zf2 PF18217.1 NODE_68928_length_229_cov_295.701031_g60987_i0forward_frame_3 - 0.098 12.7 0.9 0.098 12.7 0.9 1.6 2 0 0 2 2 2 0 Zap1 zinc finger 2 YMF19 PF02326.15 NODE_68926_length_229_cov_374.005155_g60985_i0reverse_frame_3 - 0.0014 19.3 0.4 0.0017 19.1 0.4 1.1 1 0 0 1 1 1 1 Plant ATP synthase F0 DUF2614 PF11023.8 NODE_68926_length_229_cov_374.005155_g60985_i0reverse_frame_2 - 0.0031 17.6 1.5 0.0037 17.3 1.5 1.1 1 0 0 1 1 1 1 Zinc-ribbon containing domain Comm PF15957.5 NODE_68926_length_229_cov_374.005155_g60985_i0reverse_frame_2 - 0.38 11.1 2.8 0.43 10.9 2.8 1.1 1 0 0 1 1 1 0 Commissureless ETRAMP PF09716.10 NODE_68926_length_229_cov_374.005155_g60985_i0forward_frame_2 - 0.0046 17.0 0.3 0.0053 16.8 0.3 1.1 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Ribosomal_L1 PF00687.21 NODE_68926_length_229_cov_374.005155_g60985_i0forward_frame_2 - 0.025 14.3 0.1 0.029 14.1 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L1p/L10e family Zfx_Zfy_act PF04704.13 NODE_68925_length_229_cov_436.376289_g60984_i0reverse_frame_2 - 0.014 14.6 0.8 0.014 14.5 0.8 1.1 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region Phage_min_tail PF05939.13 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_3 - 0.0006 20.2 2.7 0.3 11.5 0.2 2.1 1 1 1 2 2 2 2 Phage minor tail protein DUF5126 PF17166.4 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_3 - 0.023 14.6 0.1 4.4 7.2 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5126) Ac76 PF05814.11 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_3 - 0.29 11.2 3.4 5.8 7.0 0.2 2.0 2 0 0 2 2 2 0 Orf76 (Ac76) Gram_pos_anchor PF00746.21 NODE_68924_length_229_cov_538.283505_g60983_i0reverse_frame_2 - 0.32 11.0 8.8 2.9 7.9 1.3 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Pex2_Pex12 PF04757.14 NODE_68924_length_229_cov_538.283505_g60983_i0forward_frame_3 - 1.4 8.5 9.1 2.9 7.4 1.2 2.0 1 1 1 2 2 2 0 Pex2 / Pex12 amino terminal region DUF4440 PF14534.6 NODE_68922_length_229_cov_1562.551546_g60981_i0reverse_frame_3 - 0.00061 20.2 0.0 0.00063 20.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4440) DUF4530 PF15039.6 NODE_68921_length_230_cov_0.810256_g60980_i0reverse_frame_2 - 0.081 13.1 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4530) UBM PF14377.6 NODE_68921_length_230_cov_0.810256_g60980_i0forward_frame_2 - 0.13 11.8 1.0 0.18 11.3 1.0 1.2 1 0 0 1 1 1 0 Ubiquitin binding region Peptidase_C14 PF00656.22 NODE_68920_length_230_cov_0.810256_g60979_i0reverse_frame_2 - 0.014 15.3 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Caspase domain Lamprin PF06403.11 NODE_68918_length_230_cov_0.820513_g60977_i0forward_frame_3 - 0.25 11.3 3.2 0.28 11.2 3.2 1.1 1 0 0 1 1 1 0 Lamprin Rer1 PF03248.13 NODE_68907_length_230_cov_1.025641_g60966_i0reverse_frame_3 - 0.12 12.1 2.6 0.13 12.0 2.6 1.1 1 0 0 1 1 1 0 Rer1 family Pox_L3_FP4 PF03339.14 NODE_68906_length_230_cov_1.025641_g60965_i0reverse_frame_2 - 0.1 11.6 4.9 0.11 11.5 4.9 1.0 1 0 0 1 1 1 0 Poxvirus L3/FP4 protein Transpos_assoc PF13963.6 NODE_68903_length_230_cov_1.025641_g60962_i0forward_frame_3 - 0.25 11.7 1.2 5.1 7.5 0.1 2.0 1 1 1 2 2 2 0 Transposase-associated domain DUF802 PF05650.11 NODE_68902_length_230_cov_1.025641_g60961_i0reverse_frame_3 - 0.11 13.0 1.2 0.17 12.4 1.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF802) Caa3_CtaG PF09678.10 NODE_68898_length_230_cov_1.097436_g60957_i0forward_frame_2 - 0.065 12.7 0.1 0.071 12.6 0.1 1.0 1 0 0 1 1 1 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) Pox_I6 PF04595.13 NODE_68896_length_230_cov_1.123077_g60955_i0reverse_frame_3 - 0.00027 20.0 1.6 0.00028 19.9 1.6 1.0 1 0 0 1 1 1 1 Poxvirus I6-like family TMEM206 PF15122.6 NODE_68896_length_230_cov_1.123077_g60955_i0reverse_frame_3 - 0.011 14.9 1.1 0.012 14.8 1.1 1.0 1 0 0 1 1 1 0 TMEM206 protein family DUF4500 PF14937.6 NODE_68896_length_230_cov_1.123077_g60955_i0reverse_frame_3 - 0.024 14.7 0.2 0.031 14.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4500) TERF2_RBM PF16772.5 NODE_68896_length_230_cov_1.123077_g60955_i0reverse_frame_3 - 0.25 10.8 0.7 0.43 10.0 0.7 1.3 1 0 0 1 1 1 0 Telomeric repeat-binding factor 2 Rap1-binding motif MAS20 PF02064.15 NODE_68891_length_230_cov_1.169231_g60950_i0reverse_frame_2 - 0.06 13.4 0.3 0.073 13.2 0.3 1.1 1 0 0 1 1 1 0 MAS20 protein import receptor HIPIP PF01355.17 NODE_68890_length_230_cov_1.184615_g60949_i0reverse_frame_2 - 0.17 12.2 0.0 0.24 11.8 0.0 1.2 1 0 0 1 1 1 0 High potential iron-sulfur protein BCHF PF07284.11 NODE_68885_length_230_cov_1.210256_g60944_i0forward_frame_2 - 0.024 14.6 3.3 0.027 14.5 3.3 1.1 1 0 0 1 1 1 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) Tat PF00539.18 NODE_68883_length_230_cov_1.225641_g60942_i0reverse_frame_2 - 0.1 12.8 0.9 0.41 10.8 0.2 2.0 1 1 1 2 2 2 0 Transactivating regulatory protein (Tat) SWIM PF04434.17 NODE_68882_length_230_cov_1.225641_g60941_i0reverse_frame_2 - 0.078 12.7 0.2 0.13 11.9 0.2 1.4 1 0 0 1 1 1 0 SWIM zinc finger TIR_3 PF18567.1 NODE_68882_length_230_cov_1.225641_g60941_i0forward_frame_3 - 0.039 14.0 2.0 0.048 13.7 2.0 1.0 1 0 0 1 1 1 0 Toll/interleukin-1 receptor domain RIH_assoc PF08454.11 NODE_68880_length_230_cov_1.230769_g60939_i0reverse_frame_2 - 1.2e-11 44.3 1.1 2e-11 43.6 1.1 1.4 1 0 0 1 1 1 1 RyR and IP3R Homology associated DTC PF18102.1 NODE_68880_length_230_cov_1.230769_g60939_i0reverse_frame_2 - 0.091 12.9 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 Deltex C-terminal domain PRIMA1 PF16101.5 NODE_68879_length_230_cov_1.230769_g60938_i0reverse_frame_2 - 2.3 8.3 9.1 2.4 8.2 8.6 1.3 1 1 0 1 1 1 0 Proline-rich membrane anchor 1 DUF5516 PF17637.2 NODE_68879_length_230_cov_1.230769_g60938_i0forward_frame_3 - 0.0046 16.7 0.4 0.0067 16.2 0.4 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5516) Herpes_glycop_D PF01537.17 NODE_68877_length_230_cov_1.230769_g60936_i0forward_frame_2 - 0.077 13.2 0.2 0.1 12.8 0.2 1.2 1 0 0 1 1 1 0 Herpesvirus glycoprotein D/GG/GX domain DUF2391 PF09622.10 NODE_68871_length_230_cov_1.271795_g60930_i0forward_frame_3 - 0.039 13.3 0.0 0.041 13.2 0.0 1.0 1 0 0 1 1 1 0 Putative integral membrane protein (DUF2391) AAA_19 PF13245.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 7.6e-08 32.8 0.0 9.2e-08 32.5 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 2.2e-07 30.8 0.0 2.4e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 8.2e-05 22.5 0.0 9.4e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.00021 21.3 0.0 0.00022 21.2 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_16 PF13191.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.00065 20.1 0.0 0.00065 20.1 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.013 15.0 0.0 0.014 14.9 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.021 15.1 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.023 15.3 0.8 1.2 9.7 0.9 2.1 1 1 1 2 2 2 0 AAA domain AAA PF00004.29 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.045 14.2 0.1 0.05 14.0 0.1 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TrwB_AAD_bind PF10412.9 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.051 12.5 0.0 0.063 12.2 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain DAP3 PF10236.9 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.062 12.5 0.0 0.065 12.4 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_33 PF13671.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.071 13.3 0.3 0.32 11.1 0.3 1.9 1 1 1 2 2 2 0 AAA domain AAA_24 PF13479.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.11 12.2 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.16 11.5 0.1 0.24 10.9 0.1 1.4 1 1 1 2 2 2 0 AAA domain NTPase_1 PF03266.15 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.17 11.8 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 NTPase UvrD-helicase PF00580.21 NODE_68868_length_230_cov_1.307692_g60927_i0forward_frame_3 - 0.21 11.1 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain DNA_methylase PF00145.17 NODE_68867_length_230_cov_1.343590_g60926_i0reverse_frame_3 - 0.26 10.6 0.0 0.26 10.6 0.0 1.1 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase HSP70 PF00012.20 NODE_68866_length_230_cov_1.348718_g60925_i0reverse_frame_3 - 4.8e-09 35.0 0.0 4.8e-09 35.0 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein M16C_assoc PF08367.11 NODE_68863_length_230_cov_1.358974_g60922_i0forward_frame_3 - 0.53 9.4 2.1 4.1 6.4 0.2 1.9 1 1 1 2 2 2 0 Peptidase M16C associated Bunya_G2 PF03563.13 NODE_68861_length_230_cov_1.369231_g60920_i0reverse_frame_2 - 0.059 12.6 3.6 0.061 12.6 3.6 1.1 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 YacG PF03884.14 NODE_68858_length_230_cov_1.405128_g60917_i0reverse_frame_2 - 0.14 11.9 0.9 0.14 11.9 0.9 2.3 3 0 0 3 3 3 0 DNA gyrase inhibitor YacG DUF2227 PF09988.9 NODE_68858_length_230_cov_1.405128_g60917_i0reverse_frame_2 - 5 7.0 8.8 2.5 7.9 6.0 1.8 1 1 1 2 2 2 0 Uncharacterized metal-binding protein (DUF2227) PRTase_3 PF15610.6 NODE_68855_length_230_cov_1.435897_g60914_i0forward_frame_2 - 0.002 17.4 0.5 0.0023 17.2 0.5 1.0 1 0 0 1 1 1 1 PRTase ComF-like Baculo_LEF5 PF04838.12 NODE_68855_length_230_cov_1.435897_g60914_i0forward_frame_2 - 0.029 14.4 1.3 0.031 14.3 1.3 1.0 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 Endotoxin_N PF03945.14 NODE_68855_length_230_cov_1.435897_g60914_i0forward_frame_2 - 0.057 13.1 1.0 0.06 13.1 1.0 1.0 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain GreA_GreB_N PF03449.15 NODE_68854_length_230_cov_1.435897_g60913_i0forward_frame_3 - 0.15 12.3 2.7 0.17 12.0 2.7 1.2 1 0 0 1 1 1 0 Transcription elongation factor, N-terminal EIIC-GAT PF03611.14 NODE_68852_length_230_cov_1.482051_g60911_i0reverse_frame_3 - 3.2e-05 23.2 0.1 3.3e-05 23.2 0.1 1.0 1 0 0 1 1 1 1 PTS system sugar-specific permease component zf_Rg PF17915.1 NODE_68852_length_230_cov_1.482051_g60911_i0reverse_frame_2 - 0.067 12.6 1.9 0.1 12.1 1.9 1.3 1 0 0 1 1 1 0 Reverse gyrase zinc finger RRM_5 PF13893.6 NODE_68850_length_230_cov_1.492308_g60909_i0forward_frame_3 - 0.19 11.3 2.4 0.21 11.2 2.4 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MORN PF02493.20 NODE_68850_length_230_cov_1.492308_g60909_i0forward_frame_2 - 1.3e-15 56.3 16.5 2e-06 27.3 1.9 3.6 4 0 0 4 4 4 3 MORN repeat DUF3048_C PF17479.2 NODE_68850_length_230_cov_1.492308_g60909_i0forward_frame_2 - 0.00065 20.1 2.0 0.0037 17.6 0.2 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF3048) C-terminal domain Drf_FH3 PF06367.16 NODE_68849_length_230_cov_1.497436_g60908_i0forward_frame_3 - 0.14 11.8 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Diaphanous FH3 Domain HATPase_c PF02518.26 NODE_68846_length_230_cov_1.548718_g60905_i0reverse_frame_2 - 1.9e-08 34.8 0.2 2.1e-08 34.6 0.2 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 NODE_68846_length_230_cov_1.548718_g60905_i0reverse_frame_2 - 0.053 13.4 0.1 0.053 13.4 0.1 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Glyco_transf_22 PF03901.17 NODE_68844_length_230_cov_1.553846_g60903_i0reverse_frame_3 - 0.032 13.5 2.4 0.032 13.4 2.4 1.0 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family Pes-10 PF07149.11 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.042 12.9 6.1 0.048 12.7 6.1 1.0 1 0 0 1 1 1 0 Pes-10 NPV_P10 PF05531.12 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.061 13.8 0.8 0.072 13.6 0.8 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Glyco_hydro_25 PF01183.20 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.074 13.2 0.6 0.085 13.0 0.6 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 25 Trp_syntA PF00290.20 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.1 11.5 0.4 0.12 11.2 0.4 1.1 1 0 0 1 1 1 0 Tryptophan synthase alpha chain RuvX PF03652.15 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.1 13.0 2.0 0.12 12.7 2.0 1.1 1 0 0 1 1 1 0 Holliday junction resolvase Transferase PF02458.15 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.13 10.9 1.8 0.13 10.9 1.8 1.0 1 0 0 1 1 1 0 Transferase family DAP3 PF10236.9 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.14 11.3 3.4 0.37 9.9 1.2 1.9 1 1 1 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 ThrE PF06738.12 NODE_68844_length_230_cov_1.553846_g60903_i0forward_frame_2 - 0.22 10.8 0.2 0.24 10.8 0.2 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF5536 PF17688.1 NODE_68841_length_230_cov_1.600000_g60900_i0forward_frame_2 - 0.013 15.4 0.6 0.015 15.2 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5536) F-112 PF09645.10 NODE_68839_length_230_cov_1.610256_g60898_i0reverse_frame_3 - 0.05 13.7 3.1 0.059 13.5 3.1 1.0 1 0 0 1 1 1 0 F-112 protein DUF1148 PF06618.11 NODE_68837_length_230_cov_1.635897_g60896_i0forward_frame_3 - 0.03 14.5 0.3 0.033 14.4 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1148) MPS-4 PF17523.2 NODE_68835_length_230_cov_1.641026_g60894_i0reverse_frame_3 - 0.077 13.1 2.1 0.099 12.8 2.1 1.2 1 1 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Ribosomal_S21 PF01165.20 NODE_68834_length_230_cov_1.641026_g60893_i0reverse_frame_2 - 0.03 14.0 0.1 0.041 13.6 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein S21 Tfb5 PF06331.12 NODE_68834_length_230_cov_1.641026_g60893_i0forward_frame_3 - 0.039 14.0 0.0 0.053 13.5 0.0 1.2 1 0 0 1 1 1 0 Transcription factor TFIIH complex subunit Tfb5 Bunya_NS-S_2 PF03231.13 NODE_68832_length_230_cov_1.671795_g60891_i0forward_frame_2 - 0.085 11.6 0.1 0.085 11.6 0.1 1.1 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-S Kinesin PF00225.23 NODE_68829_length_230_cov_1.702564_g60888_i0forward_frame_3 - 0.061 12.2 0.4 0.07 12.0 0.4 1.0 1 0 0 1 1 1 0 Kinesin motor domain Keratin_B2_2 PF13885.6 NODE_68829_length_230_cov_1.702564_g60888_i0forward_frame_3 - 0.13 12.2 10.4 0.18 11.7 10.4 1.2 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein RPAP1_N PF08621.10 NODE_68826_length_230_cov_1.723077_g60885_i0reverse_frame_3 - 0.095 12.5 0.1 0.26 11.1 0.0 1.7 2 0 0 2 2 2 0 RPAP1-like, N-terminal DUF1146 PF06612.11 NODE_68826_length_230_cov_1.723077_g60885_i0reverse_frame_2 - 0.39 10.8 2.0 1.4 9.0 2.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1146) Nodulin PF02451.15 NODE_68825_length_230_cov_1.728205_g60884_i0reverse_frame_3 - 0.008 15.7 1.5 0.0082 15.6 1.5 1.0 1 0 0 1 1 1 1 Nodulin KIAA1430 PF13879.6 NODE_68824_length_230_cov_1.733333_g60883_i0reverse_frame_2 - 0.0012 19.6 1.0 0.0012 19.6 1.0 1.9 1 1 1 2 2 2 2 KIAA1430 homologue Ank_4 PF13637.6 NODE_68816_length_230_cov_1.764103_g60875_i0forward_frame_3 - 0.058 14.0 0.0 0.087 13.4 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) GSAP-16 PF14959.6 NODE_68813_length_230_cov_1.794872_g60872_i0reverse_frame_3 - 0.086 12.7 0.1 0.091 12.6 0.1 1.1 1 0 0 1 1 1 0 gamma-Secretase-activating protein C-term baeRF_family12 PF18856.1 NODE_68813_length_230_cov_1.794872_g60872_i0forward_frame_2 - 0.0094 16.5 0.1 0.0099 16.5 0.1 1.0 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 12 ComR_TPR PF18710.1 NODE_68801_length_230_cov_1.943590_g60860_i0reverse_frame_3 - 0.041 13.4 0.2 0.057 13.0 0.2 1.2 1 0 0 1 1 1 0 ComR tetratricopeptide DUF1475 PF07343.11 NODE_68798_length_230_cov_1.979487_g60857_i0forward_frame_2 - 0.015 15.1 1.2 0.015 15.1 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1475) Amidase PF01425.21 NODE_68796_length_230_cov_2.005128_g60855_i0forward_frame_2 - 2.8e-12 46.3 0.1 3.1e-12 46.2 0.1 1.0 1 0 0 1 1 1 1 Amidase PP2C PF00481.21 NODE_68795_length_230_cov_2.010256_g60854_i0reverse_frame_2 - 1.7e-20 73.8 0.1 1.8e-20 73.7 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C AAA_lid_2 PF17863.1 NODE_68794_length_230_cov_2.020513_g60853_i0reverse_frame_3 - 0.023 14.5 0.1 0.031 14.1 0.1 1.3 1 0 0 1 1 1 0 AAA lid domain DUF2182 PF09948.9 NODE_68793_length_230_cov_2.020513_g60852_i0reverse_frame_2 - 0.15 11.9 0.1 0.15 11.9 0.1 1.0 1 0 0 1 1 1 0 Predicted metal-binding integral membrane protein (DUF2182) Prok-RING_1 PF14446.6 NODE_68793_length_230_cov_2.020513_g60852_i0forward_frame_3 - 0.23 11.4 4.8 0.31 11.0 4.8 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 RSN1_TM PF13967.6 NODE_68790_length_230_cov_2.046154_g60849_i0forward_frame_2 - 0.032 14.0 0.5 0.033 13.9 0.5 1.1 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport DUF2873 PF11395.8 NODE_68787_length_230_cov_2.087179_g60846_i0forward_frame_2 - 0.0014 18.4 0.2 0.0022 17.8 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2873) Acyl-CoA_dh_N PF02771.16 NODE_68784_length_230_cov_2.128205_g60843_i0forward_frame_3 - 2.1e-09 38.0 0.0 2.3e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Bestrophin PF01062.21 NODE_68783_length_230_cov_2.164103_g60842_i0reverse_frame_3 - 0.08 12.3 1.4 0.083 12.3 1.4 1.0 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel AUDH_Cupin PF18637.1 NODE_68782_length_230_cov_2.215385_g60841_i0reverse_frame_3 - 0.019 15.0 0.7 0.02 14.9 0.7 1.1 1 0 0 1 1 1 0 Aldos-2-ulose dehydratase/isomerase (AUDH) Cupin domain CtsR_C PF17727.1 NODE_68779_length_230_cov_2.256410_g60838_i0reverse_frame_2 - 0.014 15.5 1.0 0.019 15.1 1.0 1.2 1 0 0 1 1 1 0 CtsR C-terminal dimerization domain Arg_decarbox_C PF17944.1 NODE_68779_length_230_cov_2.256410_g60838_i0reverse_frame_2 - 0.022 15.3 0.1 0.061 13.9 0.0 1.7 2 0 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension DUF1010 PF06231.11 NODE_68774_length_230_cov_2.348718_g60833_i0reverse_frame_2 - 0.068 13.7 0.1 0.078 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) DUF1700 PF08006.11 NODE_68772_length_230_cov_2.446154_g60831_i0reverse_frame_3 - 0.57 9.7 12.6 0.63 9.6 12.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Spt20 PF12090.8 NODE_68772_length_230_cov_2.446154_g60831_i0forward_frame_2 - 0.3 10.7 8.9 0.34 10.5 8.9 1.1 1 0 0 1 1 1 0 Spt20 family Stevor PF17410.2 NODE_68770_length_230_cov_2.456410_g60829_i0reverse_frame_2 - 0.65 9.5 2.1 0.8 9.2 2.1 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Omega_Repress PF07764.11 NODE_68770_length_230_cov_2.456410_g60829_i0forward_frame_2 - 0.093 13.3 0.8 3.6 8.2 0.1 2.1 1 1 1 2 2 2 0 Omega Transcriptional Repressor NADH_dehy_S2_C PF06444.11 NODE_68763_length_230_cov_2.630769_g60822_i0forward_frame_2 - 0.014 15.9 0.6 0.028 14.9 0.6 1.5 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus RANK_CRD_2 PF18278.1 NODE_68761_length_230_cov_2.687179_g60820_i0forward_frame_3 - 0.17 12.1 1.8 0.34 11.1 1.8 1.5 1 0 0 1 1 1 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 UPA_2 PF17809.1 NODE_68760_length_230_cov_2.697436_g60819_i0forward_frame_3 - 0.081 12.7 0.3 0.093 12.6 0.3 1.1 1 0 0 1 1 1 0 UPA domain Collagen PF01391.18 NODE_68760_length_230_cov_2.697436_g60819_i0forward_frame_2 - 0.032 14.0 4.3 0.057 13.2 3.0 1.8 2 0 0 2 2 2 0 Collagen triple helix repeat (20 copies) P_C10 PF14974.6 NODE_68759_length_230_cov_2.707692_g60818_i0reverse_frame_3 - 0.16 12.1 0.0 0.19 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein C10 DUF3270 PF11674.8 NODE_68758_length_230_cov_2.733333_g60817_i0reverse_frame_3 - 2.1 8.6 10.7 1.7 8.8 9.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) DUF3905 PF13045.6 NODE_68753_length_230_cov_2.830769_g60812_i0forward_frame_3 - 0.15 12.1 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3905) LRR_9 PF14580.6 NODE_68752_length_230_cov_2.856410_g60811_i0forward_frame_2 - 3.6e-11 42.9 0.1 4.2e-11 42.7 0.1 1.1 1 0 0 1 1 1 1 Leucine-rich repeat DEAD_assoc PF08494.11 NODE_68751_length_230_cov_3.015385_g60810_i0forward_frame_3 - 1.6e-22 80.3 0.0 1.7e-22 80.1 0.0 1.0 1 0 0 1 1 1 1 DEAD/H associated DUF4028 PF13220.6 NODE_68749_length_230_cov_3.169231_g60808_i0forward_frame_2 - 0.043 13.6 0.6 0.057 13.2 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) DUF3641 PF12345.8 NODE_68747_length_230_cov_3.271795_g60806_i0forward_frame_3 - 0.067 13.2 0.7 0.12 12.5 0.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3641) ACT_4 PF13291.6 NODE_68743_length_230_cov_3.876923_g60802_i0forward_frame_3 - 8.2e-07 29.5 0.2 1e-06 29.2 0.2 1.1 1 0 0 1 1 1 1 ACT domain Spermine_synth PF01564.17 NODE_68741_length_230_cov_4.287179_g60800_i0reverse_frame_2 - 6.5e-19 68.1 0.0 7e-19 68.0 0.0 1.0 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Response_reg PF00072.24 NODE_68740_length_230_cov_4.615385_g60799_i0forward_frame_2 - 1.2e-20 73.7 0.0 1.3e-20 73.7 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain YojJ PF10372.9 NODE_68739_length_230_cov_5.261538_g60798_i0reverse_frame_3 - 0.064 13.3 0.9 0.17 12.0 0.0 1.9 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus RPEL PF02755.15 NODE_68734_length_230_cov_21.712821_g60793_i0reverse_frame_3 - 0.098 12.4 0.1 4.9 7.0 0.1 2.2 2 0 0 2 2 2 0 RPEL repeat NIP_1 PF08995.10 NODE_68733_length_230_cov_26.994872_g60792_i0reverse_frame_3 - 0.047 14.1 1.0 0.078 13.4 1.0 1.3 1 0 0 1 1 1 0 Necrosis inducing protein-1 SelK_SelG PF10961.8 NODE_68733_length_230_cov_26.994872_g60792_i0forward_frame_3 - 0.11 13.2 0.3 0.13 12.9 0.3 1.1 1 0 0 1 1 1 0 Selenoprotein SelK_SelG Peptidase_S41 PF03572.18 NODE_68732_length_230_cov_29.338462_g60791_i0reverse_frame_3 - 0.16 11.5 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Peptidase family S41 Polbeta PF18765.1 NODE_68731_length_230_cov_30.015385_g60790_i0forward_frame_2 - 0.012 15.7 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase LRR_8 PF13855.6 NODE_68730_length_230_cov_31.928205_g60789_i0reverse_frame_3 - 0.012 15.4 1.5 0.016 15.0 1.5 1.2 1 0 0 1 1 1 0 Leucine rich repeat RbpA PF13397.6 NODE_68728_length_230_cov_35.656410_g60787_i0reverse_frame_3 - 0.11 13.1 0.2 0.12 13.0 0.2 1.1 1 0 0 1 1 1 0 RNA polymerase-binding protein RseC_MucC PF04246.12 NODE_68726_length_230_cov_37.512821_g60785_i0reverse_frame_3 - 0.035 14.1 0.2 0.037 14.0 0.2 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF2894 PF11445.8 NODE_68723_length_230_cov_45.230769_g60782_i0reverse_frame_2 - 0.021 15.3 0.6 0.024 15.1 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) UPF0524 PF15823.5 NODE_68722_length_230_cov_45.394872_g60781_i0forward_frame_3 - 0.1 12.0 1.1 0.11 11.8 1.1 1.0 1 0 0 1 1 1 0 UPF0524 of C3orf70 zf_UBZ PF18439.1 NODE_68719_length_230_cov_50.010256_g60778_i0forward_frame_2 - 0.02 14.5 2.0 0.031 13.9 2.0 1.3 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger DDE_Tnp_1_3 PF13612.6 NODE_68716_length_230_cov_51.076923_g60775_i0reverse_frame_3 - 0.028 14.4 2.4 0.03 14.3 2.4 1.0 1 0 0 1 1 1 0 Transposase DDE domain FtsX PF02687.21 NODE_68716_length_230_cov_51.076923_g60775_i0forward_frame_2 - 1.9 9.0 12.2 2.3 8.8 12.2 1.1 1 0 0 1 1 1 0 FtsX-like permease family Sec63 PF02889.16 NODE_68714_length_230_cov_56.158974_g60773_i0forward_frame_3 - 2.6e-08 33.3 0.0 3e-08 33.1 0.0 1.0 1 0 0 1 1 1 1 Sec63 Brl domain UL42 PF17638.2 NODE_68713_length_230_cov_57.138462_g60772_i0reverse_frame_2 - 0.0037 17.2 0.3 0.0059 16.6 0.3 1.3 1 0 0 1 1 1 1 HCMV UL42 IlvGEDA_leader PF08046.11 NODE_68713_length_230_cov_57.138462_g60772_i0forward_frame_2 - 0.1 12.1 0.7 0.16 11.5 0.1 1.7 2 0 0 2 2 2 0 IlvGEDA operon leader peptide 7tm_6 PF02949.20 NODE_68712_length_230_cov_57.753846_g60771_i0reverse_frame_2 - 6.3 5.8 13.3 6.7 5.7 13.3 1.0 1 0 0 1 1 1 0 7tm Odorant receptor IL2RB_N1 PF18707.1 NODE_68708_length_230_cov_62.230769_g60767_i0reverse_frame_3 - 0.044 14.3 3.6 0.054 14.0 3.6 1.1 1 0 0 1 1 1 0 Interleukin-2 receptor subunit beta N-terminal domain 1 UPF0242 PF06785.11 NODE_68707_length_230_cov_62.507692_g60766_i0reverse_frame_2 - 1.5 8.9 3.8 1.6 8.8 3.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Antimicrobial_6 PF08036.11 NODE_68707_length_230_cov_62.507692_g60766_i0forward_frame_2 - 0.081 13.0 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide Antimicrobial_6 PF08036.11 NODE_68706_length_230_cov_62.605128_g60765_i0reverse_frame_2 - 0.77 9.9 3.7 0.78 9.9 0.6 2.1 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide PgaD PF13994.6 NODE_68706_length_230_cov_62.605128_g60765_i0forward_frame_3 - 0.029 14.4 0.0 0.032 14.3 0.0 1.1 1 0 0 1 1 1 0 PgaD-like protein MerT PF02411.15 NODE_68702_length_230_cov_64.810256_g60761_i0forward_frame_2 - 0.03 14.4 0.4 0.033 14.2 0.4 1.1 1 0 0 1 1 1 0 MerT mercuric transport protein TB PF00683.17 NODE_68699_length_230_cov_71.512821_g60758_i0reverse_frame_2 - 0.92 9.3 9.4 0.18 11.6 3.3 2.3 2 1 0 2 2 2 0 TB domain LAGLIDADG_WhiA PF14527.6 NODE_68696_length_230_cov_75.866667_g60755_i0reverse_frame_3 - 0.057 13.5 4.5 0.07 13.2 4.5 1.1 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain FANCAA PF15146.6 NODE_68696_length_230_cov_75.866667_g60755_i0reverse_frame_3 - 0.82 8.7 5.0 0.97 8.5 5.0 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated RRN3 PF05327.11 NODE_68696_length_230_cov_75.866667_g60755_i0reverse_frame_2 - 0.7 8.4 13.7 0.78 8.2 13.7 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 SR-25 PF10500.9 NODE_68695_length_230_cov_76.246154_g60754_i0forward_frame_2 - 0.33 10.5 7.8 0.45 10.1 7.8 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Lep_receptor_Ig PF06328.11 NODE_68693_length_230_cov_78.333333_g60752_i0forward_frame_2 - 0.02 14.8 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain STAG PF08514.11 NODE_68690_length_230_cov_84.010256_g60749_i0reverse_frame_2 - 0.1 12.5 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 STAG domain DUF5365 PF17326.2 NODE_68689_length_230_cov_89.307692_g60748_i0reverse_frame_3 - 0.016 15.6 0.3 0.018 15.4 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5365) Fimbrial_PilY2 PF14481.6 NODE_68689_length_230_cov_89.307692_g60748_i0reverse_frame_3 - 0.12 12.1 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Type 4 fimbrial biogenesis protein PilY2 ZZ PF00569.17 NODE_68687_length_230_cov_91.241026_g60746_i0forward_frame_2 - 0.0021 17.8 1.3 0.0046 16.7 1.3 1.5 1 1 0 1 1 1 1 Zinc finger, ZZ type zf-UBR PF02207.20 NODE_68687_length_230_cov_91.241026_g60746_i0forward_frame_2 - 0.0077 16.4 1.0 0.01 16.0 1.0 1.1 1 0 0 1 1 1 1 Putative zinc finger in N-recognin (UBR box) PAS_5 PF07310.13 NODE_68685_length_230_cov_94.835897_g60744_i0reverse_frame_2 - 0.15 11.9 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 PAS domain PRANC PF09372.10 NODE_68684_length_230_cov_95.235897_g60743_i0forward_frame_2 - 0.024 15.0 2.4 0.027 14.8 2.4 1.1 1 0 0 1 1 1 0 PRANC domain Na_sulph_symp PF00939.19 NODE_68682_length_230_cov_101.723077_g60741_i0reverse_frame_2 - 5.4e-16 58.7 3.7 5.8e-16 58.6 3.7 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region DUF2729 PF10870.8 NODE_68682_length_230_cov_101.723077_g60741_i0forward_frame_2 - 0.093 12.6 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2729) PPR_2 PF13041.6 NODE_68680_length_230_cov_101.943590_g60739_i0reverse_frame_2 - 4.9e-08 33.1 0.0 5.9e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 PPR repeat family PPR PF01535.20 NODE_68680_length_230_cov_101.943590_g60739_i0reverse_frame_2 - 0.00084 19.4 0.2 0.11 12.7 0.0 2.2 2 0 0 2 2 2 2 PPR repeat PPR_3 PF13812.6 NODE_68680_length_230_cov_101.943590_g60739_i0reverse_frame_2 - 0.0031 17.6 0.0 0.0041 17.2 0.0 1.1 1 0 0 1 1 1 1 Pentatricopeptide repeat domain zf-RING_UBOX PF13445.6 NODE_68680_length_230_cov_101.943590_g60739_i0forward_frame_2 - 0.018 15.0 0.8 0.027 14.5 0.8 1.3 1 0 0 1 1 1 0 RING-type zinc-finger NCE101 PF11654.8 NODE_68678_length_230_cov_110.107692_g60737_i0reverse_frame_3 - 0.13 12.0 0.1 0.21 11.3 0.1 1.3 1 0 0 1 1 1 0 Non-classical export protein 1 Avl9 PF09794.9 NODE_68678_length_230_cov_110.107692_g60737_i0forward_frame_2 - 0.031 13.0 1.4 0.033 12.9 1.4 1.0 1 0 0 1 1 1 0 Transport protein Avl9 MRP-L47 PF06984.13 NODE_68677_length_230_cov_112.682051_g60736_i0reverse_frame_2 - 0.05 13.7 0.4 0.076 13.1 0.4 1.3 1 0 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) DUF4656 PF15551.6 NODE_68676_length_230_cov_124.625641_g60735_i0reverse_frame_3 - 0.16 11.5 3.5 0.17 11.4 3.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) DUF4010 PF13194.6 NODE_68676_length_230_cov_124.625641_g60735_i0reverse_frame_3 - 0.22 11.2 0.0 0.26 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4010) CotJA PF11007.8 NODE_68674_length_230_cov_134.184615_g60733_i0reverse_frame_3 - 0.0048 16.7 0.0 0.19 11.6 0.0 2.3 2 0 0 2 2 2 2 Spore coat associated protein JA (CotJA) FixQ PF05545.11 NODE_68674_length_230_cov_134.184615_g60733_i0reverse_frame_2 - 0.049 13.6 0.0 0.072 13.1 0.0 1.2 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ TSR PF18487.1 NODE_68673_length_230_cov_134.830769_g60732_i0forward_frame_3 - 0.9 9.8 5.0 0.52 10.6 1.0 2.2 2 1 0 2 2 2 0 Thrombospondin type 1 repeat Phage_tail_S PF05069.13 NODE_68670_length_230_cov_206.528205_g60729_i0forward_frame_2 - 0.016 15.1 0.3 0.018 14.9 0.3 1.0 1 0 0 1 1 1 0 Phage virion morphogenesis family Colicin_K PF17500.2 NODE_68667_length_230_cov_422.769231_g60726_i0forward_frame_3 - 0.079 13.5 0.0 0.09 13.3 0.0 1.1 1 0 0 1 1 1 0 Colicin-K # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks354.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks354.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks354.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks354.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Phage_min_tail PF05939.13 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_3 - 0.00099 19.5 2.0 0.34 11.3 0.2 2.1 1 1 1 2 2 2 2 Phage minor tail protein DUF5126 PF17166.4 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_3 - 0.088 12.7 0.0 3.8 7.4 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5126) Ac76 PF05814.11 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_3 - 0.55 10.3 2.6 5.8 7.0 0.2 2.0 2 0 0 2 2 2 0 Orf76 (Ac76) Gram_pos_anchor PF00746.21 NODE_68666_length_230_cov_535.456410_g60725_i0forward_frame_2 - 0.32 11.0 8.8 2.9 7.9 1.3 2.3 2 0 0 2 2 2 0 LPXTG cell wall anchor motif Pyrophosphatase PF00719.19 NODE_68662_length_230_cov_1192.697436_g60721_i0reverse_frame_3 - 0.031 14.1 1.5 0.031 14.1 1.5 1.1 1 0 0 1 1 1 0 Inorganic pyrophosphatase Adhesin_P1 PF03257.13 NODE_68661_length_230_cov_1230.820513_g60720_i0reverse_frame_2 - 0.18 12.3 1.4 0.22 12.0 0.2 1.8 1 1 1 2 2 2 0 Mycoplasma adhesin P1 S_4TM PF18159.1 NODE_68656_length_231_cov_0.816327_g60715_i0reverse_frame_3 - 6.1 6.0 6.0 6.5 6.0 6.0 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain PDGF_N PF04692.13 NODE_68656_length_231_cov_0.816327_g60715_i0reverse_frame_2 - 0.041 14.7 1.4 0.051 14.4 1.4 1.2 1 0 0 1 1 1 0 Platelet-derived growth factor, N terminal region DUF2796 PF10986.8 NODE_68656_length_231_cov_0.816327_g60715_i0reverse_frame_2 - 3.6 7.5 15.8 3.9 7.4 15.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2796) Tmemb_9 PF05434.11 NODE_68656_length_231_cov_0.816327_g60715_i0forward_frame_3 - 0.00055 19.8 1.7 0.00066 19.6 1.7 1.1 1 0 0 1 1 1 1 TMEM9 DUF1676 PF07898.13 NODE_68656_length_231_cov_0.816327_g60715_i0forward_frame_3 - 0.017 15.2 0.4 0.017 15.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) Dev_Cell_Death PF10539.9 NODE_68651_length_231_cov_0.913265_g60710_i0forward_frame_3 - 0.095 12.6 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Development and cell death domain Plant_zn_clust PF10533.9 NODE_68650_length_231_cov_0.933673_g60709_i0forward_frame_2 - 0.38 10.8 2.6 0.31 11.1 1.3 1.5 1 1 0 1 1 1 0 Plant zinc cluster domain Importin_rep_4 PF18808.1 NODE_68645_length_231_cov_1.020408_g60704_i0reverse_frame_2 - 0.026 14.8 0.3 0.03 14.6 0.3 1.1 1 0 0 1 1 1 0 Importin repeat UPF0167 PF03691.14 NODE_68645_length_231_cov_1.020408_g60704_i0forward_frame_2 - 0.29 10.9 4.8 1.3 8.7 0.1 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0167) YuiB PF14068.6 NODE_68638_length_231_cov_1.127551_g60697_i0reverse_frame_2 - 0.0029 18.2 2.4 0.0033 18.0 2.4 1.1 1 0 0 1 1 1 1 Putative membrane protein FSAP_sig_propep PF03032.15 NODE_68631_length_231_cov_1.204082_g60690_i0reverse_frame_2 - 0.11 12.6 2.2 0.11 12.6 2.2 1.7 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide Myosin_tail_1 PF01576.19 NODE_68629_length_231_cov_1.214286_g60688_i0reverse_frame_3 - 0.065 11.0 0.1 0.073 10.9 0.1 1.0 1 0 0 1 1 1 0 Myosin tail YrhC PF14143.6 NODE_68626_length_231_cov_1.214286_g60685_i0forward_frame_3 - 0.067 13.3 1.8 0.49 10.5 0.5 2.2 1 1 1 2 2 2 0 YrhC-like protein DUF4215 PF13948.6 NODE_68626_length_231_cov_1.214286_g60685_i0forward_frame_2 - 1.6e-09 38.0 27.3 2.7e-07 30.9 27.3 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4215) WLM PF08325.10 NODE_68624_length_231_cov_1.219388_g60683_i0reverse_frame_3 - 0.025 14.7 0.7 0.038 14.1 0.7 1.4 1 1 0 1 1 1 0 WLM domain RCC1 PF00415.18 NODE_68624_length_231_cov_1.219388_g60683_i0reverse_frame_2 - 0.0023 18.5 0.0 0.0027 18.3 0.0 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat PTN_MK_N PF05196.13 NODE_68624_length_231_cov_1.219388_g60683_i0reverse_frame_2 - 0.099 12.9 2.6 0.13 12.5 2.6 1.3 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, N-terminal domain Glyco_transf_15 PF01793.16 NODE_68624_length_231_cov_1.219388_g60683_i0forward_frame_2 - 0.00059 19.2 0.0 0.00059 19.2 0.0 1.0 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase Capsid_N PF16903.5 NODE_68623_length_231_cov_1.219388_g60682_i0forward_frame_3 - 0.028 14.1 0.7 0.03 14.0 0.7 1.1 1 0 0 1 1 1 0 Major capsid protein N-terminus PI_PP_I PF18363.1 NODE_68623_length_231_cov_1.219388_g60682_i0forward_frame_2 - 0.068 13.4 0.5 0.15 12.3 0.5 1.6 1 1 0 1 1 1 0 Phosphoinositide phosphatase insertion domain BAR_2 PF10455.9 NODE_68622_length_231_cov_1.219388_g60681_i0reverse_frame_3 - 0.0092 15.2 1.4 0.011 14.8 1.4 1.2 1 0 0 1 1 1 1 Bin/amphiphysin/Rvs domain for vesicular trafficking NPV_P10 PF05531.12 NODE_68622_length_231_cov_1.219388_g60681_i0reverse_frame_3 - 0.026 15.0 0.1 0.033 14.6 0.1 1.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein HTH_57 PF18679.1 NODE_68622_length_231_cov_1.219388_g60681_i0reverse_frame_3 - 0.034 14.4 0.4 0.043 14.1 0.4 1.1 1 0 0 1 1 1 0 ThcOx helix turn helix domain RPW8 PF05659.11 NODE_68622_length_231_cov_1.219388_g60681_i0reverse_frame_3 - 0.058 13.1 2.4 0.13 12.0 2.4 1.5 1 1 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DivIC PF04977.15 NODE_68622_length_231_cov_1.219388_g60681_i0reverse_frame_3 - 0.86 9.4 5.2 6.2 6.7 0.9 2.1 1 1 1 2 2 2 0 Septum formation initiator Adeno_IVa2 PF02456.15 NODE_68622_length_231_cov_1.219388_g60681_i0forward_frame_2 - 0.072 11.9 1.2 0.068 11.9 1.2 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein GP79 PF17463.2 NODE_68620_length_231_cov_1.224490_g60679_i0forward_frame_2 - 0.26 11.3 2.5 0.42 10.7 0.4 2.2 2 1 0 2 2 2 0 Gene product 79 DUF971 PF06155.12 NODE_68618_length_231_cov_1.224490_g60677_i0forward_frame_2 - 0.084 13.5 0.3 0.094 13.4 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF971) Nucleos_tra2_C PF07662.13 NODE_68613_length_231_cov_1.260204_g60672_i0reverse_frame_2 - 0.015 15.2 0.3 0.017 15.0 0.3 1.0 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus Septin PF00735.18 NODE_68612_length_231_cov_1.275510_g60671_i0reverse_frame_3 - 0.11 11.8 0.2 0.11 11.8 0.2 1.1 1 0 0 1 1 1 0 Septin FLYWCH_u PF16662.5 NODE_68611_length_231_cov_1.306122_g60670_i0forward_frame_3 - 0.001 19.1 0.3 0.002 18.1 0.3 1.5 1 0 0 1 1 1 1 FLYWCH-type zinc finger-containing protein 1 PRR18 PF15671.5 NODE_68609_length_231_cov_1.311224_g60668_i0reverse_frame_3 - 0.065 13.1 7.5 0.066 13.1 7.5 1.0 1 0 0 1 1 1 0 Proline-rich protein family 18 rve PF00665.26 NODE_68609_length_231_cov_1.311224_g60668_i0forward_frame_3 - 0.0004 20.6 0.0 0.00046 20.4 0.0 1.1 1 0 0 1 1 1 1 Integrase core domain Glycos_transf_4 PF00953.21 NODE_68601_length_231_cov_1.392857_g60660_i0reverse_frame_3 - 7.5e-06 26.0 2.7 8.7e-06 25.8 2.7 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 4 FAM70 PF14967.6 NODE_68597_length_231_cov_1.428571_g60656_i0forward_frame_3 - 0.001 18.6 2.2 0.0011 18.5 2.2 1.0 1 0 0 1 1 1 1 FAM70 protein DUF4457 PF14652.6 NODE_68597_length_231_cov_1.428571_g60656_i0forward_frame_2 - 8.6e-07 28.5 0.0 8.8e-07 28.5 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4457) zf-CpG_bind_C PF12269.8 NODE_68594_length_231_cov_1.464286_g60653_i0reverse_frame_3 - 0.096 12.5 1.6 0.1 12.4 1.6 1.0 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain DUF4446 PF14584.6 NODE_68594_length_231_cov_1.464286_g60653_i0reverse_frame_3 - 0.16 11.9 1.7 0.18 11.8 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) DUF5310 PF17237.2 NODE_68589_length_231_cov_1.479592_g60648_i0forward_frame_2 - 0.4 10.6 6.4 0.34 10.8 1.2 2.7 2 1 1 3 3 3 0 Family of unknown function (DUF5310) DUF3099 PF11298.8 NODE_68588_length_231_cov_1.505102_g60647_i0reverse_frame_3 - 0.055 13.6 0.4 0.068 13.3 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3099) GASA PF02704.14 NODE_68588_length_231_cov_1.505102_g60647_i0forward_frame_3 - 0.16 12.1 7.3 0.027 14.6 3.2 1.8 1 1 1 2 2 2 0 Gibberellin regulated protein UPF0160 PF03690.13 NODE_68588_length_231_cov_1.505102_g60647_i0forward_frame_3 - 0.21 11.2 0.0 0.23 11.0 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0160) HCV_NS4a PF01006.20 NODE_68587_length_231_cov_1.551020_g60646_i0reverse_frame_3 - 0.17 11.6 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS4a DUF1364 PF07102.12 NODE_68585_length_231_cov_1.571429_g60644_i0forward_frame_3 - 0.047 13.5 0.8 0.057 13.3 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1364) Jas PF16135.5 NODE_68581_length_231_cov_1.602041_g60640_i0forward_frame_3 - 0.022 14.9 0.1 0.025 14.7 0.1 1.2 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling FPL PF09758.9 NODE_68574_length_231_cov_1.632653_g60633_i0reverse_frame_2 - 0.073 13.1 0.0 0.083 12.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein zf-SAP30 PF13866.6 NODE_68572_length_231_cov_1.663265_g60631_i0reverse_frame_3 - 0.0035 17.4 0.1 0.0053 16.8 0.1 1.3 1 0 0 1 1 1 1 SAP30 zinc-finger ZF-HD_dimer PF04770.12 NODE_68572_length_231_cov_1.663265_g60631_i0reverse_frame_2 - 0.97 9.8 6.3 0.21 11.9 1.3 2.0 1 1 1 2 2 2 0 ZF-HD protein dimerisation region YopE PF03545.13 NODE_68572_length_231_cov_1.663265_g60631_i0forward_frame_3 - 0.04 14.1 0.0 0.051 13.7 0.0 1.3 1 0 0 1 1 1 0 Yersinia virulence determinant (YopE) Lyase_1 PF00206.20 NODE_68565_length_231_cov_1.724490_g60624_i0reverse_frame_3 - 1e-20 74.4 0.1 1.1e-20 74.3 0.1 1.0 1 0 0 1 1 1 1 Lyase NADH_4Fe-4S PF10589.9 NODE_68564_length_231_cov_1.729592_g60623_i0forward_frame_3 - 0.049 13.7 0.1 0.069 13.2 0.1 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ParD_antitoxin PF03693.14 NODE_68563_length_231_cov_1.734694_g60622_i0reverse_frame_2 - 0.11 12.9 0.3 0.16 12.4 0.3 1.2 1 0 0 1 1 1 0 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH Glyco_transf_41 PF13844.6 NODE_68562_length_231_cov_1.734694_g60621_i0forward_frame_3 - 0.083 11.3 0.0 0.089 11.2 0.0 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 41 Zn_Tnp_IS91 PF14319.6 NODE_68556_length_231_cov_1.872449_g60615_i0forward_frame_3 - 0.16 12.0 3.5 0.27 11.3 3.5 1.4 1 0 0 1 1 1 0 Transposase zinc-binding domain AAA_33 PF13671.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 2.5e-10 40.7 0.2 5.3e-05 23.4 0.0 2.0 1 1 1 2 2 2 2 AAA domain Zeta_toxin PF06414.12 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 9e-05 21.8 0.2 0.13 11.5 0.1 2.0 1 1 1 2 2 2 2 Zeta toxin MMR_HSR1 PF01926.23 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.0027 17.8 0.1 0.003 17.6 0.1 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.0051 16.1 0.1 0.022 14.1 0.1 1.8 1 1 0 1 1 1 1 6-phosphofructo-2-kinase RNA_helicase PF00910.22 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.0086 16.5 0.0 0.011 16.2 0.0 1.2 1 0 0 1 1 1 1 RNA helicase AAA_29 PF13555.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.01 15.6 0.0 0.033 13.9 0.0 1.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain Viral_helicase1 PF01443.18 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.011 15.5 0.0 0.012 15.4 0.0 1.3 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_18 PF13238.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.014 16.0 0.1 0.098 13.2 0.1 1.9 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.014 14.6 0.0 0.02 14.1 0.0 1.3 1 1 0 1 1 1 0 NB-ARC domain AAA_22 PF13401.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.014 15.6 0.0 0.14 12.4 0.0 1.8 1 1 1 2 2 2 0 AAA domain KTI12 PF08433.10 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.015 14.8 0.0 0.023 14.2 0.0 1.3 1 1 0 1 1 1 0 Chromatin associated protein KTI12 Ploopntkinase3 PF18751.1 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.019 14.9 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 ABC_tran PF00005.27 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.021 15.3 0.0 0.022 15.2 0.0 1.3 1 1 0 1 1 1 0 ABC transporter AAA_25 PF13481.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.029 14.0 0.0 0.055 13.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.03 14.3 0.0 0.11 12.4 0.0 1.7 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.18 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.04 13.3 0.1 0.16 11.3 0.0 1.8 1 1 1 2 2 2 0 FtsK/SpoIIIE family AAA_28 PF13521.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.054 13.7 0.0 0.074 13.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.055 13.9 0.0 0.055 13.9 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 NODE_68555_length_231_cov_1.887755_g60614_i0reverse_frame_2 - 0.11 12.4 0.0 0.13 12.1 0.0 1.3 1 1 0 1 1 1 0 RsgA GTPase Enolase_C PF00113.22 NODE_68552_length_231_cov_1.913265_g60611_i0forward_frame_2 - 6e-31 107.8 0.9 6.2e-31 107.7 0.9 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain MR_MLE_C PF13378.6 NODE_68552_length_231_cov_1.913265_g60611_i0forward_frame_2 - 0.055 13.0 0.0 0.058 13.0 0.0 1.0 1 0 0 1 1 1 0 Enolase C-terminal domain-like MAAL_C PF07476.11 NODE_68552_length_231_cov_1.913265_g60611_i0forward_frame_2 - 0.072 12.2 0.7 0.084 12.0 0.7 1.0 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus DUF530 PF04409.12 NODE_68549_length_231_cov_1.933673_g60608_i0reverse_frame_3 - 0.087 11.2 0.1 0.096 11.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF530) HECW1_helix PF18436.1 NODE_68549_length_231_cov_1.933673_g60608_i0reverse_frame_3 - 0.14 12.3 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 MraZ PF02381.18 NODE_68547_length_231_cov_1.959184_g60606_i0reverse_frame_3 - 0.026 14.5 0.0 0.037 14.0 0.0 1.3 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Myotub-related PF06602.14 NODE_68544_length_231_cov_2.000000_g60603_i0reverse_frame_2 - 1.1e-30 106.7 0.0 1.2e-30 106.7 0.0 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain Y_phosphatase PF00102.27 NODE_68544_length_231_cov_2.000000_g60603_i0reverse_frame_2 - 0.00051 19.7 0.0 0.00064 19.4 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.20 NODE_68544_length_231_cov_2.000000_g60603_i0reverse_frame_2 - 0.002 17.9 0.0 0.0031 17.3 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 NODE_68544_length_231_cov_2.000000_g60603_i0reverse_frame_2 - 0.014 15.4 0.0 0.019 15.0 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family Y_phosphatase2 PF03162.13 NODE_68544_length_231_cov_2.000000_g60603_i0reverse_frame_2 - 0.17 11.5 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family Sep15_SelM PF08806.11 NODE_68543_length_231_cov_2.005102_g60602_i0forward_frame_2 - 0.11 12.7 0.3 5.1 7.3 0.3 2.1 1 1 0 1 1 1 0 Sep15/SelM redox domain DUF5346 PF17281.2 NODE_68541_length_231_cov_2.020408_g60600_i0forward_frame_3 - 0.051 13.6 0.2 0.075 13.1 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5346) SH3-RhoG_link PF16609.5 NODE_68537_length_231_cov_2.102041_g60596_i0forward_frame_3 - 0.43 10.3 1.6 0.5 10.1 1.6 1.1 1 0 0 1 1 1 0 SH3-RhoGEF linking unstructured region SMN PF06003.12 NODE_68537_length_231_cov_2.102041_g60596_i0forward_frame_3 - 2.6 7.3 5.0 2.7 7.2 5.0 1.2 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) BTK PF00779.19 NODE_68535_length_231_cov_2.112245_g60594_i0reverse_frame_3 - 0.0073 16.1 1.3 0.0073 16.1 1.3 1.8 2 0 0 2 2 2 1 BTK motif Wzz PF02706.15 NODE_68531_length_231_cov_2.132653_g60590_i0reverse_frame_2 - 1.1e-18 67.3 0.2 1.3e-18 67.1 0.2 1.0 1 0 0 1 1 1 1 Chain length determinant protein Lamprin PF06403.11 NODE_68530_length_231_cov_2.132653_g60589_i0forward_frame_3 - 0.87 9.5 8.4 2.5 8.0 4.7 2.4 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_68530_length_231_cov_2.132653_g60589_i0forward_frame_2 - 0.36 10.8 2.5 1 9.3 1.4 1.9 1 1 1 2 2 2 0 Lamprin DUF2960 PF11173.8 NODE_68530_length_231_cov_2.132653_g60589_i0forward_frame_2 - 0.65 10.5 4.2 14 6.2 0.8 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2960) EpoR_lig-bind PF09067.10 NODE_68528_length_231_cov_2.142857_g60587_i0forward_frame_3 - 0.21 11.8 1.5 0.33 11.2 1.5 1.5 1 1 0 1 1 1 0 Erythropoietin receptor, ligand binding UPF0547 PF10571.9 NODE_68528_length_231_cov_2.142857_g60587_i0forward_frame_3 - 0.24 11.5 3.4 0.3 11.2 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Propeptide_C1 PF08127.13 NODE_68522_length_231_cov_2.214286_g60581_i0forward_frame_2 - 0.082 12.8 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Peptidase family C1 propeptide IRF-2BP1_2 PF11261.8 NODE_68519_length_231_cov_2.260204_g60578_i0forward_frame_2 - 0.0069 15.9 0.1 0.013 15.1 0.1 1.4 1 0 0 1 1 1 1 Interferon regulatory factor 2-binding protein zinc finger MmgE_PrpD PF03972.14 NODE_68518_length_231_cov_2.270408_g60577_i0reverse_frame_3 - 0.15 10.6 0.3 0.15 10.6 0.3 1.0 1 0 0 1 1 1 0 MmgE/PrpD family zf-CCHC PF00098.23 NODE_68518_length_231_cov_2.270408_g60577_i0reverse_frame_2 - 1.6e-06 27.9 5.2 2.5e-06 27.3 5.2 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_68518_length_231_cov_2.270408_g60577_i0reverse_frame_2 - 0.0066 16.2 4.1 0.01 15.6 4.1 1.3 1 0 0 1 1 1 1 Zinc knuckle Na_Ca_ex PF01699.24 NODE_68518_length_231_cov_2.270408_g60577_i0forward_frame_3 - 0.032 14.2 0.6 0.035 14.1 0.6 1.0 1 0 0 1 1 1 0 Sodium/calcium exchanger protein CAF1C_H4-bd PF12265.8 NODE_68518_length_231_cov_2.270408_g60577_i0forward_frame_2 - 0.063 13.5 0.0 0.084 13.2 0.0 1.3 1 0 0 1 1 1 0 Histone-binding protein RBBP4 or subunit C of CAF1 complex UBA_3 PF09288.10 NODE_68517_length_231_cov_2.275510_g60576_i0reverse_frame_3 - 0.034 14.0 0.2 0.043 13.6 0.2 1.2 1 0 0 1 1 1 0 Fungal ubiquitin-associated domain NOA36 PF06524.12 NODE_68517_length_231_cov_2.275510_g60576_i0forward_frame_2 - 0.056 12.8 0.6 0.064 12.6 0.6 1.0 1 0 0 1 1 1 0 NOA36 protein IRK_N PF08466.10 NODE_68515_length_231_cov_2.316327_g60574_i0forward_frame_2 - 0.057 13.6 0.1 0.08 13.1 0.1 1.3 1 0 0 1 1 1 0 Inward rectifier potassium channel N-terminal RepA_N PF06970.11 NODE_68514_length_231_cov_2.316327_g60573_i0forward_frame_3 - 0.026 14.4 0.1 0.04 13.8 0.1 1.3 1 0 0 1 1 1 0 Replication initiator protein A (RepA) N-terminus ANAPC4 PF12896.7 NODE_68513_length_231_cov_2.326531_g60572_i0forward_frame_3 - 0.021 14.3 0.1 0.025 14.1 0.1 1.0 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 APOBEC_C PF05240.14 NODE_68513_length_231_cov_2.326531_g60572_i0forward_frame_3 - 0.064 13.2 0.2 0.07 13.1 0.2 1.3 1 1 0 1 1 1 0 APOBEC-like C-terminal domain Pkinase PF00069.25 NODE_68512_length_231_cov_2.357143_g60571_i0forward_frame_2 - 0.0016 17.8 0.4 0.0017 17.8 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_68512_length_231_cov_2.357143_g60571_i0forward_frame_2 - 0.011 15.0 0.1 0.012 15.0 0.1 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase AFP PF02420.15 NODE_68510_length_231_cov_2.382653_g60569_i0forward_frame_3 - 0.013 15.7 3.5 1.4 9.5 0.1 2.5 2 0 0 2 2 2 0 Insect antifreeze protein repeat RVT_1 PF00078.27 NODE_68508_length_231_cov_2.408163_g60567_i0forward_frame_2 - 0.028 14.0 0.0 0.03 13.8 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) LIP1 PF15904.5 NODE_68508_length_231_cov_2.408163_g60567_i0forward_frame_2 - 0.15 12.5 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 pKID PF02173.17 NODE_68507_length_231_cov_2.433673_g60566_i0reverse_frame_3 - 0.063 12.8 0.1 0.11 12.0 0.1 1.4 1 0 0 1 1 1 0 pKID domain TACI-CRD2 PF09305.10 NODE_68505_length_231_cov_2.484694_g60564_i0forward_frame_3 - 0.038 14.0 0.2 5.8 7.0 0.0 2.2 2 0 0 2 2 2 0 TACI, cysteine-rich domain PX PF00787.24 NODE_68499_length_231_cov_2.581633_g60558_i0forward_frame_3 - 3.4e-07 30.2 0.1 3.7e-07 30.1 0.1 1.1 1 0 0 1 1 1 1 PX domain GCIP PF13324.6 NODE_68499_length_231_cov_2.581633_g60558_i0forward_frame_3 - 0.12 12.0 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting Dor1 PF04124.12 NODE_68495_length_231_cov_2.734694_g60554_i0forward_frame_2 - 0.017 13.8 0.1 0.019 13.7 0.1 1.0 1 0 0 1 1 1 0 Dor1-like family Lipoprotein_3 PF00938.17 NODE_68495_length_231_cov_2.734694_g60554_i0forward_frame_2 - 0.038 14.2 0.4 0.05 13.8 0.4 1.2 1 0 0 1 1 1 0 Lipoprotein Fur_reg_FbpB PF13040.6 NODE_68495_length_231_cov_2.734694_g60554_i0forward_frame_2 - 0.061 12.9 1.2 3.2 7.4 0.3 2.2 2 0 0 2 2 2 0 Fur-regulated basic protein B UBA_3 PF09288.10 NODE_68494_length_231_cov_2.739796_g60553_i0forward_frame_3 - 0.9 9.4 5.1 7.2 6.5 0.7 2.3 2 0 0 2 2 2 0 Fungal ubiquitin-associated domain DUF4706 PF15797.5 NODE_68492_length_231_cov_2.857143_g60551_i0forward_frame_3 - 0.0011 19.5 3.4 0.0013 19.2 3.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4706) UPF0564 PF10595.9 NODE_68492_length_231_cov_2.857143_g60551_i0forward_frame_2 - 2.5e-07 30.1 2.8 3e-07 29.9 2.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0564 CRC_subunit PF08624.10 NODE_68491_length_231_cov_2.867347_g60550_i0reverse_frame_2 - 0.22 11.9 0.0 0.24 11.8 0.0 1.1 1 0 0 1 1 1 0 Chromatin remodelling complex Rsc7/Swp82 subunit RRM_1 PF00076.22 NODE_68489_length_231_cov_2.928571_g60548_i0reverse_frame_3 - 0.071 12.9 0.0 0.089 12.6 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TPIP1 PF15338.6 NODE_68486_length_231_cov_3.051020_g60545_i0reverse_frame_2 - 0.0023 18.0 1.8 0.0029 17.7 1.8 1.1 1 0 0 1 1 1 1 p53-regulated apoptosis-inducing protein 1 Nucleoside_tran PF01733.18 NODE_68484_length_231_cov_3.056122_g60543_i0forward_frame_3 - 3e-08 33.4 1.3 3.2e-08 33.3 1.3 1.0 1 0 0 1 1 1 1 Nucleoside transporter ADH_N PF08240.12 NODE_68481_length_231_cov_3.234694_g60540_i0reverse_frame_2 - 2.8e-13 49.7 0.1 3e-13 49.6 0.1 1.0 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain zf-C3HC4_3 PF13920.6 NODE_68480_length_231_cov_3.280612_g60539_i0reverse_frame_3 - 0.0038 17.1 2.7 0.0046 16.8 2.7 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_68480_length_231_cov_3.280612_g60539_i0reverse_frame_3 - 0.0049 16.7 3.5 0.0066 16.3 3.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_68480_length_231_cov_3.280612_g60539_i0reverse_frame_3 - 0.067 13.1 3.1 0.09 12.6 3.1 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) AZUL PF16558.5 NODE_68479_length_231_cov_3.484694_g60538_i0reverse_frame_3 - 0.049 13.9 0.2 0.068 13.4 0.2 1.2 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A zf-3CxxC_2 PF17180.4 NODE_68479_length_231_cov_3.484694_g60538_i0forward_frame_3 - 0.021 15.5 0.1 0.03 15.0 0.1 1.2 1 0 0 1 1 1 0 Zinc-binding domain Gtr1_RagA PF04670.12 NODE_68476_length_231_cov_4.423469_g60535_i0reverse_frame_3 - 0.029 13.7 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Toxin_33 PF08121.11 NODE_68476_length_231_cov_4.423469_g60535_i0forward_frame_3 - 2.6 7.9 6.8 2.1 8.2 2.6 2.1 2 0 0 2 2 2 0 Waglerin family FAM199X PF15814.5 NODE_68475_length_231_cov_4.959184_g60534_i0reverse_frame_3 - 0.071 12.2 1.1 0.071 12.2 1.1 1.0 1 0 0 1 1 1 0 Protein family FAM199X RNase_PH PF01138.21 NODE_68473_length_231_cov_6.596939_g60532_i0reverse_frame_3 - 0.022 15.3 0.1 0.026 15.0 0.1 1.1 1 0 0 1 1 1 0 3' exoribonuclease family, domain 1 AAA_assoc PF14363.6 NODE_68473_length_231_cov_6.596939_g60532_i0reverse_frame_3 - 0.16 12.3 0.9 0.2 12.0 0.9 1.4 1 1 0 1 1 1 0 Domain associated at C-terminal with AAA SpvD PF05563.12 NODE_68473_length_231_cov_6.596939_g60532_i0reverse_frame_3 - 3.8 7.1 8.1 3.8 7.1 7.3 1.4 1 1 0 1 1 1 0 Salmonella plasmid virulence protein SpvD C6_DPF PF10170.9 NODE_68472_length_231_cov_14.352041_g60531_i0forward_frame_3 - 0.06 13.7 2.0 0.071 13.5 2.0 1.3 1 1 0 1 1 1 0 Cysteine-rich domain NinF PF05810.12 NODE_68469_length_231_cov_23.882653_g60528_i0reverse_frame_2 - 0.028 14.3 0.1 0.041 13.8 0.1 1.3 1 0 0 1 1 1 0 NinF protein DiS_P_DiS PF06750.13 NODE_68469_length_231_cov_23.882653_g60528_i0reverse_frame_2 - 0.068 13.3 0.5 0.074 13.2 0.5 1.2 1 1 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain DUF948 PF06103.11 NODE_68467_length_231_cov_33.897959_g60526_i0reverse_frame_2 - 0.031 14.5 0.0 0.037 14.3 0.0 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Ribophorin_II PF05817.14 NODE_68465_length_231_cov_35.030612_g60524_i0forward_frame_2 - 3.6 6.0 7.0 4 5.9 7.0 1.0 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II Treslin_N PF15292.6 NODE_68464_length_231_cov_36.576531_g60523_i0reverse_frame_2 - 0.088 11.1 0.0 0.098 11.0 0.0 1.0 1 0 0 1 1 1 0 Treslin N-terminus Adeno_52K PF03052.15 NODE_68464_length_231_cov_36.576531_g60523_i0reverse_frame_2 - 0.15 11.5 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa DUF1140 PF06600.11 NODE_68464_length_231_cov_36.576531_g60523_i0forward_frame_2 - 0.012 16.0 0.4 0.014 15.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1140) Cadherin_tail PF15974.5 NODE_68462_length_231_cov_38.438776_g60521_i0reverse_frame_3 - 2.9 8.2 9.4 7.8 6.8 9.4 1.7 1 1 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region FBP_C PF16571.5 NODE_68459_length_231_cov_40.974490_g60518_i0reverse_frame_2 - 0.066 12.7 0.2 0.078 12.5 0.2 1.1 1 0 0 1 1 1 0 FBP C-terminal treble-clef zinc-finger TIR_2 PF13676.6 NODE_68458_length_231_cov_41.678571_g60517_i0reverse_frame_2 - 0.0025 18.4 0.0 0.0029 18.2 0.0 1.0 1 0 0 1 1 1 1 TIR domain TIR PF01582.20 NODE_68458_length_231_cov_41.678571_g60517_i0reverse_frame_2 - 0.04 13.7 0.0 0.045 13.6 0.0 1.1 1 0 0 1 1 1 0 TIR domain CTV_P23 PF04808.12 NODE_68457_length_231_cov_41.846939_g60516_i0forward_frame_3 - 0.12 11.9 0.2 0.15 11.6 0.2 1.1 1 0 0 1 1 1 0 Citrus tristeza virus (CTV) P23 protein DUF3398 PF11878.8 NODE_68456_length_231_cov_45.209184_g60515_i0reverse_frame_2 - 0.045 14.2 1.3 0.048 14.1 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3398) CedA PF10729.9 NODE_68454_length_231_cov_46.816327_g60513_i0reverse_frame_3 - 0.027 14.3 0.0 0.032 14.0 0.0 1.1 1 0 0 1 1 1 0 Cell division activator CedA DUF2574 PF10836.8 NODE_68453_length_231_cov_47.015306_g60512_i0forward_frame_2 - 0.0021 17.9 0.2 0.0025 17.7 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2574) DUF1096 PF06493.11 NODE_68453_length_231_cov_47.015306_g60512_i0forward_frame_2 - 0.7 10.4 7.5 3.8 8.0 7.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1096) SNAD1 PF18744.1 NODE_68451_length_231_cov_48.653061_g60510_i0forward_frame_3 - 3 7.7 8.5 0.095 12.6 2.0 1.6 1 1 1 2 2 2 0 Secreted Novel AID/APOBEC-like Deaminase 1 DUF2628 PF10947.8 NODE_68451_length_231_cov_48.653061_g60510_i0forward_frame_2 - 0.087 13.2 6.2 0.1 12.9 6.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) LHC PF00556.20 NODE_68450_length_231_cov_53.163265_g60509_i0reverse_frame_2 - 0.21 11.8 0.3 0.32 11.3 0.3 1.2 1 0 0 1 1 1 0 Antenna complex alpha/beta subunit AIF-MLS PF14962.6 NODE_68449_length_231_cov_53.913265_g60508_i0reverse_frame_2 - 3.6 7.5 13.9 3.8 7.4 13.9 1.0 1 0 0 1 1 1 0 Mitochondria Localisation Sequence Pirin PF02678.16 NODE_68447_length_231_cov_54.372449_g60506_i0forward_frame_2 - 0.13 12.2 0.1 0.19 11.7 0.1 1.1 1 0 0 1 1 1 0 Pirin DUF454 PF04304.13 NODE_68444_length_231_cov_59.270408_g60503_i0forward_frame_2 - 0.032 14.2 0.1 0.032 14.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF454) HCV_NS2 PF01538.18 NODE_68441_length_231_cov_60.173469_g60500_i0reverse_frame_3 - 0.14 11.8 0.2 0.14 11.8 0.2 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 Filament PF00038.21 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.00062 19.4 6.7 0.00064 19.4 6.7 1.0 1 0 0 1 1 1 1 Intermediate filament protein CLZ PF16526.5 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0015 18.9 6.4 0.0072 16.7 3.0 2.0 2 0 0 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Tropomyosin PF00261.20 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0023 17.3 7.4 0.0032 16.9 7.4 1.2 1 0 0 1 1 1 1 Tropomyosin BicD PF09730.9 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0043 15.6 6.4 0.0051 15.3 6.4 1.0 1 0 0 1 1 1 1 Microtubule-associated protein Bicaudal-D SHE3 PF17078.5 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0049 16.6 4.8 0.0069 16.1 4.8 1.1 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 FliD_C PF07195.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0069 15.8 2.8 0.0069 15.8 2.8 1.4 1 1 0 1 1 1 1 Flagellar hook-associated protein 2 C-terminus Phage_GP20 PF06810.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0092 15.8 5.9 0.011 15.6 5.9 1.1 1 0 0 1 1 1 1 Phage minor structural protein GP20 CC2-LZ PF16516.5 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.0093 16.3 7.7 0.027 14.8 7.8 1.7 1 1 0 1 1 1 1 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF812 PF05667.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.012 14.5 5.4 0.013 14.4 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Gp-FAR-1 PF05823.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.012 15.9 1.9 0.015 15.7 1.9 1.2 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) TPR_MLP1_2 PF07926.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.016 15.3 10.0 0.054 13.6 5.6 2.0 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF3584 PF12128.8 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.018 12.6 5.8 0.021 12.4 5.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DHR10 PF18595.1 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.028 14.5 6.5 0.028 14.5 6.5 2.0 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain TMPIT PF07851.13 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.028 13.7 5.2 0.033 13.5 5.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein Fib_alpha PF08702.10 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.043 14.0 5.6 0.16 12.2 5.6 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Herpes_UL14 PF03580.14 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.044 14.0 2.7 0.05 13.9 2.7 1.1 1 0 0 1 1 1 0 Herpesvirus UL14-like protein FlxA PF14282.6 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.048 13.7 10.7 0.092 12.7 10.7 1.5 1 1 0 1 1 1 0 FlxA-like protein Laminin_II PF06009.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.053 13.5 3.9 0.046 13.7 2.3 1.5 1 1 0 1 1 1 0 Laminin Domain II DASH_Dam1 PF08653.10 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.058 13.2 1.6 1.9 8.4 0.4 2.2 2 0 0 2 2 2 0 DASH complex subunit Dam1 Cas_DxTHG PF09455.10 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.063 12.8 1.6 0.061 12.9 1.6 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family Fmp27_WPPW PF10359.9 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.074 11.9 5.9 0.082 11.8 5.9 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain ACCA PF03255.14 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.078 12.9 4.3 0.095 12.6 4.3 1.1 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Baculo_PEP_C PF04513.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.079 13.0 0.3 0.098 12.7 0.3 1.2 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus CdvA PF18822.1 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.09 12.6 9.2 0.86 9.4 9.0 2.3 1 1 1 2 2 2 0 CdvA-like coiled-coil domain COG2 PF06148.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.098 12.7 5.2 0.28 11.3 5.2 1.6 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 ApoO PF09769.9 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.1 12.6 0.7 0.19 11.7 0.6 1.6 1 1 0 1 1 1 0 Apolipoprotein O TSC22 PF01166.18 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.12 12.7 5.5 0.36 11.2 0.7 2.4 1 1 1 2 2 2 0 TSC-22/dip/bun family OmpH PF03938.14 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.13 12.6 7.5 0.17 12.2 7.5 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.16 11.3 2.8 0.21 10.9 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) MbeB_N PF04837.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.17 12.2 7.5 0.51 10.7 2.1 2.9 1 1 2 3 3 3 0 MbeB-like, N-term conserved region DivIC PF04977.15 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.18 11.6 12.1 0.28 11.0 1.8 2.7 1 1 2 3 3 3 0 Septum formation initiator P35 PF02331.15 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.2 11.0 1.7 0.22 10.9 0.6 1.5 1 1 1 2 2 2 0 Apoptosis preventing protein FliD_N PF02465.18 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.25 12.1 4.5 0.32 11.7 4.5 1.2 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus FapA PF03961.13 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.26 9.9 5.7 0.28 9.7 5.7 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF1515 PF07439.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.27 11.3 2.8 0.41 10.7 2.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1515) Fzo_mitofusin PF04799.13 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.27 10.7 4.5 0.6 9.6 4.7 1.5 1 1 0 1 1 1 0 fzo-like conserved region SlyX PF04102.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.37 11.5 8.8 0.64 10.7 3.0 2.4 1 1 1 2 2 2 0 SlyX TolA_bind_tri PF16331.5 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.41 10.8 10.6 4.3 7.5 4.0 2.2 1 1 1 2 2 2 0 TolA binding protein trimerisation Lectin_N PF03954.14 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.5 10.1 6.1 0.78 9.5 1.9 2.0 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Csm1_N PF18504.1 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.53 10.7 9.6 3.5 8.0 2.7 2.2 1 1 1 2 2 2 0 Csm1 N-terminal domain YtxH PF12732.7 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.58 10.7 6.0 3.5 8.2 6.0 1.9 1 1 0 1 1 1 0 YtxH-like protein Exonuc_VII_L PF02601.15 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.59 9.7 4.1 0.61 9.6 4.1 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Tho2 PF11262.8 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 0.84 8.8 5.4 0.93 8.6 5.4 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Pox_A_type_inc PF04508.12 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 1.1 9.2 8.0 1.1 9.3 0.4 3.1 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat Swi5 PF07061.11 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 1.1 9.3 8.1 0.91 9.7 5.2 2.0 1 1 1 2 2 2 0 Swi5 XhlA PF10779.9 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 1.4 9.2 8.6 1.2 9.3 6.0 2.0 1 1 1 2 2 2 0 Haemolysin XhlA 60KD_IMP PF02096.20 NODE_68441_length_231_cov_60.173469_g60500_i0forward_frame_2 - 4.1 7.3 5.6 5.6 6.8 0.1 2.1 1 1 1 2 2 2 0 60Kd inner membrane protein DUF1967 PF09269.11 NODE_68439_length_231_cov_61.341837_g60498_i0forward_frame_2 - 0.12 12.3 0.3 0.17 11.9 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1967) Tombus_P33 PF08500.10 NODE_68438_length_231_cov_61.484694_g60497_i0forward_frame_2 - 0.1 12.5 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Tombusvirus p33 DUF1540 PF07561.11 NODE_68436_length_231_cov_64.331633_g60495_i0reverse_frame_2 - 0.94 9.8 5.2 0.43 10.9 0.7 2.3 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1540) CGI-121 PF08617.10 NODE_68435_length_231_cov_66.979592_g60494_i0reverse_frame_2 - 0.023 14.8 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 Kinase binding protein CGI-121 DUF294 PF03445.13 NODE_68434_length_231_cov_72.974490_g60493_i0reverse_frame_3 - 0.085 12.7 0.2 0.1 12.4 0.2 1.1 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 DUF1036 PF06282.11 NODE_68434_length_231_cov_72.974490_g60493_i0reverse_frame_2 - 0.075 13.6 0.0 0.077 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1036) ArsP_2 PF11449.8 NODE_68434_length_231_cov_72.974490_g60493_i0forward_frame_2 - 0.09 12.0 0.4 0.09 12.0 0.4 1.1 1 0 0 1 1 1 0 Putative, 10TM heavy-metal exporter DUF1644 PF07800.12 NODE_68430_length_231_cov_82.882653_g60489_i0reverse_frame_2 - 0.067 13.3 0.1 0.071 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) DUF2785 PF10978.8 NODE_68430_length_231_cov_82.882653_g60489_i0reverse_frame_2 - 0.14 11.9 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2785) Adeno_E4 PF05385.11 NODE_68426_length_231_cov_90.806122_g60485_i0forward_frame_3 - 0.025 14.7 0.4 0.026 14.6 0.4 1.1 1 0 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein Membralin PF09746.9 NODE_68425_length_231_cov_96.612245_g60484_i0forward_frame_3 - 0.052 12.6 0.0 0.057 12.5 0.0 1.1 1 0 0 1 1 1 0 Tumour-associated protein DUF1242 PF06842.12 NODE_68424_length_231_cov_100.739796_g60483_i0reverse_frame_3 - 0.2 11.5 2.0 0.34 10.8 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1242) Toxin_16 PF07945.11 NODE_68424_length_231_cov_100.739796_g60483_i0forward_frame_2 - 0.019 14.8 2.1 0.027 14.4 2.1 1.3 1 0 0 1 1 1 0 Janus-atracotoxin Jacalin PF01419.17 NODE_68420_length_231_cov_137.469388_g60479_i0reverse_frame_3 - 2.3e-07 30.8 0.1 2.5e-07 30.7 0.1 1.0 1 0 0 1 1 1 1 Jacalin-like lectin domain DUF1600 PF07667.11 NODE_68420_length_231_cov_137.469388_g60479_i0forward_frame_3 - 0.017 15.3 0.5 0.02 15.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) Keratin_assoc PF09775.9 NODE_68418_length_231_cov_196.857143_g60477_i0reverse_frame_2 - 0.035 13.7 0.6 0.04 13.6 0.6 1.2 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 OFeT_1 PF16955.5 NODE_68411_length_231_cov_707.571429_g60470_i0reverse_frame_3 - 0.1 12.3 0.3 0.1 12.3 0.3 1.1 1 0 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter DUF588 PF04535.12 NODE_68410_length_231_cov_778.142857_g60469_i0reverse_frame_2 - 0.033 14.0 0.5 0.038 13.8 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF588) Elicitin PF00964.17 ORF99604 - 0.0061 16.6 0.4 0.0073 16.4 0.4 1.2 1 0 0 1 1 1 1 Elicitin DUF2206 PF09971.9 ORF9952 - 0.14 10.9 3.3 0.15 10.8 3.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) CotE PF10628.9 ORF98938 - 0.16 11.6 0.1 0.17 11.5 0.1 1.1 1 0 0 1 1 1 0 Outer spore coat protein E (CotE) UDPGP PF01704.18 ORF98696 - 0.21 10.2 0.7 0.22 10.1 0.7 1.0 1 0 0 1 1 1 0 UTP--glucose-1-phosphate uridylyltransferase DUF4773 PF15998.5 ORF97435 - 0.048 14.2 0.0 0.059 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4773) CbbQ_C PF08406.10 ORF96833 - 0.048 13.9 0.0 0.059 13.6 0.0 1.2 1 0 0 1 1 1 0 CbbQ/NirQ/NorQ C-terminal Mit_KHE1 PF10173.9 ORF96077 - 1 9.4 3.7 1 9.4 3.7 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related DUF1151 PF06625.11 ORF95532 - 0.053 13.5 0.1 0.069 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1151) Syntaxin-18_N PF10496.9 ORF94209 - 0.18 12.1 0.2 2.2 8.6 0.0 2.4 2 1 1 3 3 3 0 SNARE-complex protein Syntaxin-18 N-terminus v110 PF01639.17 ORF94010 - 0.011 15.6 0.7 0.013 15.4 0.7 1.1 1 0 0 1 1 1 0 Viral family 110 C6_DPF PF10170.9 ORF94010 - 1.7 9.1 9.5 19 5.7 6.8 2.1 1 1 1 2 2 2 0 Cysteine-rich domain TGF_beta_GS PF08515.12 ORF93927 - 0.14 11.7 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Transforming growth factor beta type I GS-motif ALIX_LYPXL_bnd PF13949.6 ORF92545 - 0.048 12.9 0.1 0.057 12.7 0.1 1.0 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV Toxin_16 PF07945.11 ORF92394 - 0.086 12.7 3.1 0.086 12.7 3.1 2.4 3 0 0 3 3 3 0 Janus-atracotoxin DUF1604 PF07713.13 ORF92056 - 0.0084 15.9 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1604) SPK PF04435.18 ORF91269 - 0.082 13.3 0.2 0.11 13.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF545) DUF465 PF04325.13 ORF91115 - 0.03 14.4 0.6 0.03 14.4 0.6 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF465) EIF_2_alpha PF07541.12 ORF91115 - 0.063 13.4 1.0 0.15 12.2 1.0 1.6 1 1 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit DUF3551 PF12071.8 ORF90502 - 0.075 13.1 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3551) DUF5341 PF17276.2 ORF90502 - 0.1 12.8 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5341) Keratin_B2_2 PF13885.6 ORF90098 - 1.9 8.5 10.7 11 6.0 10.7 2.1 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Pescadillo_N PF06732.11 ORF90004 - 1.4e-26 93.7 1.3 1.5e-26 93.5 1.3 1.0 1 0 0 1 1 1 1 Pescadillo N-terminus Fer4_4 PF12800.7 ORF89925 - 0.0023 18.3 0.7 0.0023 18.3 0.7 1.8 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 ORF89925 - 0.0062 16.6 3.0 0.0062 16.6 3.0 1.8 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 ORF89925 - 0.9 9.7 5.0 0.24 11.6 2.1 1.6 2 0 0 2 2 2 0 4Fe-4S binding domain LGT PF01790.18 ORF89149 - 0.067 12.4 0.0 0.067 12.4 0.0 1.1 1 0 0 1 1 1 0 Prolipoprotein diacylglyceryl transferase PAGK PF15284.6 ORF88298 - 0.0014 18.5 0.1 0.0019 18.0 0.1 1.3 1 0 0 1 1 1 1 Phage-encoded virulence factor DcuC PF03606.15 ORF87397 - 0.059 11.8 0.1 0.059 11.8 0.1 1.0 1 0 0 1 1 1 0 C4-dicarboxylate anaerobic carrier TMIE PF16038.5 ORF86357 - 0.0011 18.7 0.3 0.0013 18.6 0.3 1.1 1 0 0 1 1 1 1 TMIE protein Rep_fac-A_3 PF08661.11 ORF86080 - 0.11 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Replication factor A protein 3 MORN PF02493.20 ORF85896 - 3.4e-15 54.9 5.8 4.3e-08 32.6 0.3 2.8 3 0 0 3 3 3 2 MORN repeat PATR PF12951.7 ORF85896 - 0.023 14.8 0.0 0.05 13.7 0.0 1.6 1 0 0 1 1 1 0 Passenger-associated-transport-repeat CDC4_D PF16856.5 ORF85893 - 0.027 14.3 0.1 0.046 13.6 0.1 1.5 1 1 0 1 1 1 0 Cell division control protein 4 dimerisation domain HD-ZIP_N PF04618.12 ORF85235 - 0.018 15.6 0.8 0.018 15.5 0.8 1.0 1 0 0 1 1 1 0 HD-ZIP protein N terminus Toxin_16 PF07945.11 ORF85172 - 0.086 12.7 3.1 0.086 12.7 3.1 2.4 3 0 0 3 3 3 0 Janus-atracotoxin Alba PF01918.21 ORF83104 - 0.001 18.9 1.5 0.0015 18.3 1.5 1.4 1 1 0 1 1 1 1 Alba Pro_racemase PF05544.11 ORF83104 - 0.028 13.5 0.7 0.03 13.4 0.7 1.0 1 0 0 1 1 1 0 Proline racemase EspF PF04806.12 ORF82717 - 0.024 15.1 1.4 0.04 14.3 1.4 1.4 1 0 0 1 1 1 0 EspF protein repeat Prenyltrans PF00432.21 ORF82697 - 0.069 12.9 0.4 0.095 12.5 0.4 1.4 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat Holin_BlyA PF05102.12 ORF82339 - 0.0061 16.5 0.2 0.0088 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family DUF3551 PF12071.8 ORF82007 - 0.075 13.1 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3551) DUF5341 PF17276.2 ORF82007 - 0.1 12.8 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5341) DUF3965 PF13112.6 ORF81246 - 0.0063 15.8 0.1 0.0072 15.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3965) Rhomboid PF01694.22 ORF81150 - 0.00097 19.2 3.7 0.0011 19.0 0.3 1.9 1 1 1 2 2 2 1 Rhomboid family DUF3099 PF11298.8 ORF81150 - 0.021 14.9 0.6 0.028 14.5 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) OTT_1508_deam PF14441.6 ORF80610 - 0.098 12.7 1.5 0.14 12.2 1.5 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase RRM_2 PF04059.12 ORF80172 - 1.5e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 NETI PF14044.6 ORF79868 - 0.089 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 NETI protein Glyco_hydro_85 PF03644.13 ORF79571 - 0.055 12.9 1.0 0.054 12.9 1.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 85 PRIMA1 PF16101.5 ORF79548 - 2.8 8.0 9.0 3.2 7.8 9.0 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 PPV_E2_C PF00511.17 ORF79363 - 0.042 14.0 1.6 0.061 13.5 1.6 1.3 1 0 0 1 1 1 0 E2 (early) protein, C terminal DUF2197 PF09963.9 ORF79302 - 0.13 12.5 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) DUF4760 PF15956.5 ORF77180 - 0.13 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4760) NADH_dehy_S2_C PF06444.11 ORF7711 - 0.1 13.1 2.4 0.18 12.3 2.4 1.5 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus DUF3989 PF13150.6 ORF77054 - 0.21 11.4 0.2 0.41 10.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) Pentapeptide_3 PF13576.6 ORF76999 - 0.0061 16.7 6.0 0.0077 16.4 6.0 1.2 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) tRNA_int_endo PF01974.17 ORF76775 - 0.05 13.7 0.0 0.053 13.6 0.0 1.1 1 0 0 1 1 1 0 tRNA intron endonuclease, catalytic C-terminal domain Circo_capsid PF02443.15 ORF75962 - 2 7.9 4.7 2 7.9 4.7 1.0 1 0 0 1 1 1 0 Circovirus capsid protein DUF1082 PF06449.11 ORF753 - 0.28 11.1 3.9 0.76 9.7 0.2 2.2 1 1 1 2 2 2 0 Mitochondrial domain of unknown function (DUF1082) DUF2767 PF10965.8 ORF75110 - 2.5e-34 117.1 1.7 2.8e-34 116.9 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2767) ParcG PF10274.9 ORF74750 - 2.7e-29 102.6 0.1 3e-29 102.4 0.1 1.0 1 0 0 1 1 1 1 Parkin co-regulated protein KleE PF17394.2 ORF74686 - 0.028 14.6 0.1 0.033 14.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein Vma12 PF11712.8 ORF74252 - 7.8 6.6 5.7 11 6.1 5.7 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks355.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks355.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks355.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks355.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Tme5_EGF_like PF09064.10 ORF73139 - 2 8.3 5.2 0.33 10.9 1.2 1.8 2 1 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like zf-CCHC_6 PF15288.6 ORF72003 - 0.0068 16.2 0.3 0.011 15.6 0.3 1.3 1 0 0 1 1 1 1 Zinc knuckle PAD_M PF08527.10 ORF71904 - 0.12 12.0 0.1 0.14 11.8 0.1 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain TBCC PF07986.12 ORF71509 - 0.025 14.3 0.6 0.03 14.0 0.6 1.2 1 0 0 1 1 1 0 Tubulin binding cofactor C dDENN PF03455.19 ORF71194 - 0.0015 18.5 0.8 0.0028 17.6 0.4 1.6 2 0 0 2 2 2 1 dDENN domain TSLP PF15216.6 ORF70795 - 0.007 16.6 0.0 0.007 16.6 0.0 1.1 1 0 0 1 1 1 1 Thymic stromal lymphopoietin DUF3332 PF11810.8 ORF7071 - 5.8 6.5 6.0 7.1 6.2 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) Phospholamban PF04272.14 ORF7071 - 8 6.0 11.7 9.9 5.7 7.3 2.2 2 0 0 2 2 2 0 Phospholamban Na_H_Exchanger PF00999.21 ORF7044 - 0.0038 16.1 0.4 0.0041 16.0 0.4 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Spp-24 PF07448.11 ORF70235 - 1.1 9.4 6.8 0.9 9.8 5.5 1.5 1 1 0 1 1 1 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain DSPc PF00782.20 ORF69940 - 0.0022 17.8 0.0 0.0023 17.8 0.0 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Castor1_N PF18700.1 ORF69846 - 0.008 16.0 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain UPF1_Zn_bind PF09416.10 ORF6949 - 9.1e-21 74.4 4.3 1e-20 74.3 4.3 1.0 1 0 0 1 1 1 1 RNA helicase (UPF2 interacting domain) GPHH PF16905.5 ORF69340 - 0.1 12.4 0.1 0.21 11.4 0.1 1.5 1 0 0 1 1 1 0 Voltage-dependent L-type calcium channel, IQ-associated AAL_decarboxy PF03306.13 ORF68176 - 0.023 14.0 0.5 0.024 14.0 0.5 1.0 1 0 0 1 1 1 0 Alpha-acetolactate decarboxylase Cas6b_C PF17262.2 ORF68176 - 0.047 13.8 0.4 0.051 13.7 0.4 1.0 1 0 0 1 1 1 0 Cas6b C-terminal domain Terminase_2 PF03592.16 ORF68145 - 0.012 16.1 0.1 0.015 15.8 0.1 1.2 1 0 0 1 1 1 0 Terminase small subunit HCMV_UL139 PF12507.8 ORF68086 - 0.12 12.7 1.2 0.14 12.5 1.2 1.2 1 0 0 1 1 1 0 Human Cytomegalovirus UL139 protein RCC1_2 PF13540.6 ORF67560 - 2.3e-05 24.1 1.6 0.034 14.0 0.1 2.2 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF67560 - 0.022 14.8 0.1 5.2 7.1 0.0 2.0 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 PLN_propep PF16485.5 ORF67560 - 0.048 13.4 0.1 0.072 12.8 0.1 1.2 1 0 0 1 1 1 0 Protealysin propeptide RCC1 PF00415.18 ORF67560 - 3.1 8.5 5.8 9.8 6.9 0.6 2.9 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat NOP5NT PF08156.13 ORF67234 - 0.00016 21.9 1.6 0.0002 21.7 0.1 1.9 2 1 0 2 2 2 1 NOP5NT (NUC127) domain HIG_1_N PF04588.13 ORF67223 - 0.044 14.0 0.6 0.065 13.5 0.6 1.3 1 0 0 1 1 1 0 Hypoxia induced protein conserved region p450 PF00067.22 ORF67191 - 2.3e-12 46.4 0.0 2.4e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Adeno_E1A PF02703.14 ORF66110 - 0.32 10.6 4.3 0.33 10.5 4.3 1.0 1 0 0 1 1 1 0 Early E1A protein Ldl_recept_a PF00057.18 ORF66110 - 0.55 10.5 0.3 0.55 10.5 0.3 2.7 3 1 0 3 3 3 0 Low-density lipoprotein receptor domain class A BTK PF00779.19 ORF65956 - 1.9 8.4 7.6 5.1 7.0 0.1 3.4 4 0 0 4 4 4 0 BTK motif Polyoma_agno PF01736.16 ORF64529 - 1.8 8.4 4.1 1.4 8.7 0.7 2.0 1 1 1 2 2 2 0 Polyomavirus agnoprotein DUF2470 PF10615.9 ORF64373 - 4.5e-08 33.6 0.0 5.8e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2470) hGDE_N PF14699.6 ORF64265 - 0.013 15.6 0.0 0.014 15.5 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain from the human glycogen debranching enzyme GCSF PF16647.5 ORF64048 - 0.04 13.8 0.1 0.048 13.5 0.1 1.0 1 0 0 1 1 1 0 Granulocyte colony-stimulating factor MycE_N PF17843.1 ORF64048 - 0.16 12.5 0.0 0.19 12.2 0.0 1.1 1 0 0 1 1 1 0 MycE methyltransferase N-terminal MORN PF02493.20 ORF63959 - 3.5e-14 51.8 26.4 1.3e-07 31.1 2.6 4.1 4 0 0 4 4 4 4 MORN repeat SID-1_RNA_chan PF13965.6 ORF63688 - 0.12 10.7 0.0 0.15 10.5 0.0 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 COX17 PF05051.13 ORF63128 - 1.3e-19 70.2 7.7 2.1e-19 69.6 7.7 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase copper chaperone (COX17) TetR_C_36 PF18598.1 ORF62344 - 0.042 13.8 0.2 0.047 13.6 0.2 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain UBA_4 PF14555.6 ORF62344 - 0.06 13.2 0.0 0.13 12.1 0.0 1.5 2 0 0 2 2 2 0 UBA-like domain BRCT PF00533.26 ORF62344 - 0.069 13.5 0.0 0.082 13.3 0.0 1.1 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 ORF62344 - 0.15 12.5 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 BRCT domain, a BRCA1 C-terminus domain Fer4_3 PF12798.7 ORF62221 - 1.1 10.4 8.6 0.8 10.8 5.2 2.4 2 1 0 2 2 2 0 4Fe-4S binding domain DUF4821 PF16092.5 ORF61887 - 0.071 12.7 0.4 0.079 12.6 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4821) DUF3134 PF11332.8 ORF61627 - 0.12 12.7 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3134) INTS5_C PF14838.6 ORF60744 - 0.017 13.8 2.2 0.017 13.8 2.2 1.0 1 0 0 1 1 1 0 Integrator complex subunit 5 C-terminus B2-adapt-app_C PF09066.10 ORF60744 - 0.039 14.0 0.2 0.042 13.9 0.2 1.0 1 0 0 1 1 1 0 Beta2-adaptin appendage, C-terminal sub-domain PRIMA1 PF16101.5 ORF60699 - 2.8 8.0 9.0 3.2 7.8 9.0 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 UCH_N PF16674.5 ORF60621 - 0.018 15.0 0.4 0.02 14.8 0.3 1.3 1 1 0 1 1 1 0 N-terminal of ubiquitin carboxyl-terminal hydrolase 37 DUF515 PF04415.12 ORF60480 - 0.21 10.0 6.8 0.22 9.9 6.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) ssDBP PF17878.1 ORF60329 - 0.17 12.1 1.2 0.24 11.7 1.2 1.2 1 0 0 1 1 1 0 Single-stranded DNA-binding protein zf-C3HC4_3 PF13920.6 ORF60195 - 1.1e-08 34.8 9.2 2e-08 33.9 9.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF60195 - 1.3e-07 31.4 12.9 1.3e-07 31.4 12.9 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF60195 - 3.9e-06 26.8 9.0 3.9e-06 26.8 9.0 1.9 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_2 PF13639.6 ORF60195 - 1.6e-05 25.1 11.7 1.6e-05 25.1 11.7 1.7 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 ORF60195 - 1.7e-05 24.7 11.9 1.7e-05 24.7 11.9 1.9 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF60195 - 4.3e-05 23.3 12.1 4.3e-05 23.3 12.1 2.0 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF60195 - 7.7e-05 22.5 7.2 7.7e-05 22.5 7.2 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 ORF60195 - 9.8e-05 22.6 6.3 0.00019 21.6 6.3 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF60195 - 0.00032 20.8 10.1 0.00032 20.8 10.1 1.8 2 1 0 2 2 2 1 zinc finger of C3HC4-type, RING ASFV_p27 PF06556.11 ORF60195 - 0.9 9.7 3.8 1.3 9.2 3.8 1.4 1 1 0 1 1 1 0 IAP-like protein p27 C-terminus Peptidase_C7 PF01830.18 ORF5918 - 0.066 12.6 0.1 0.07 12.5 0.1 1.1 1 0 0 1 1 1 0 Peptidase C7 family v110 PF01639.17 ORF58651 - 0.17 11.7 10.1 0.27 11.1 10.2 1.5 1 1 0 1 1 1 0 Viral family 110 DUF1201 PF06716.11 ORF5737 - 2.2 8.4 12.7 3.8 7.6 0.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1201) TrmO PF01980.16 ORF57360 - 0.034 14.4 0.2 0.038 14.2 0.2 1.3 1 1 0 1 1 1 0 tRNA-methyltransferase O ABC2_membrane_3 PF12698.7 ORF57349 - 0.85 8.7 8.9 0.85 8.7 8.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Peptidase_C47 PF05543.13 ORF56784 - 0.0011 18.6 0.0 0.0013 18.4 0.0 1.0 1 0 0 1 1 1 1 Staphopain peptidase C47 DUF1289 PF06945.13 ORF56784 - 0.035 13.9 3.1 0.035 13.9 3.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1289) Myticin-prepro PF10690.9 ORF56784 - 0.97 9.7 5.2 5.4 7.3 5.2 1.9 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel IFT57 PF10498.9 ORF56612 - 0.0057 15.7 5.2 0.006 15.6 5.2 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF2935 PF11155.8 ORF56612 - 0.012 15.9 1.4 0.015 15.7 1.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) HAUS-augmin3 PF14932.6 ORF56612 - 0.012 15.2 2.9 0.014 15.0 2.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Spc7 PF08317.11 ORF56612 - 0.019 13.8 3.1 0.021 13.7 3.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein SLATT_5 PF18160.1 ORF56612 - 0.02 14.2 4.7 0.024 14.0 4.7 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 RmuC PF02646.16 ORF56612 - 0.023 13.8 1.0 0.024 13.8 1.0 1.0 1 0 0 1 1 1 0 RmuC family DUF1664 PF07889.12 ORF56612 - 0.028 14.5 1.3 0.031 14.3 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) PMSR PF01625.21 ORF56612 - 0.03 14.5 0.2 0.034 14.3 0.2 1.1 1 0 0 1 1 1 0 Peptide methionine sulfoxide reductase YlqD PF11068.8 ORF56612 - 0.035 14.5 4.2 0.043 14.2 4.2 1.1 1 0 0 1 1 1 0 YlqD protein Spc24 PF08286.11 ORF56612 - 0.037 14.3 3.1 0.042 14.1 3.1 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Fib_alpha PF08702.10 ORF56612 - 0.038 14.2 6.2 0.065 13.4 6.2 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Med9 PF07544.13 ORF56612 - 0.046 13.8 2.2 0.068 13.3 2.2 1.3 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 GrpE PF01025.19 ORF56612 - 0.055 13.1 3.6 0.066 12.9 3.6 1.1 1 0 0 1 1 1 0 GrpE SOGA PF11365.8 ORF56612 - 0.067 14.3 3.6 0.076 14.2 3.6 1.0 1 0 0 1 1 1 0 Protein SOGA DUF4239 PF14023.6 ORF56612 - 0.1 12.3 0.8 0.11 12.2 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF2090 PF09863.9 ORF56612 - 0.1 11.6 0.1 0.1 11.6 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2090) Phlebovirus_G1 PF07243.11 ORF56499 - 5.6 5.2 6.3 6.5 5.0 6.3 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Lantibiotic_a PF14867.6 ORF56422 - 7.6 6.4 9.0 0.79 9.5 2.1 2.3 2 0 0 2 2 2 0 Lantibiotic alpha Phlebovirus_G1 PF07243.11 ORF55613 - 5.6 5.2 6.3 6.5 5.0 6.3 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Spp-24 PF07448.11 ORF55539 - 1.1 9.4 6.8 0.9 9.8 5.5 1.5 1 1 0 1 1 1 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain GAPT PF11770.8 ORF55359 - 0.054 13.3 0.8 0.059 13.2 0.8 1.2 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) DUF1981 PF09324.10 ORF55318 - 0.13 12.1 0.4 0.15 11.9 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1981) LBR_tudor PF09465.10 ORF55318 - 0.2 11.5 0.0 0.4 10.5 0.0 1.5 1 0 0 1 1 1 0 Lamin-B receptor of TUDOR domain DUF1068 PF06364.12 ORF54950 - 7.6 6.4 11.7 16 5.3 11.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1068) F-box-like PF12937.7 ORF54561 - 0.00023 21.0 0.0 0.00037 20.3 0.0 1.3 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 ORF54561 - 0.11 12.5 0.1 0.28 11.1 0.0 1.6 2 0 0 2 2 2 0 F-box domain Baculo_LEF-11 PF06385.12 ORF54195 - 0.035 14.6 0.0 0.041 14.4 0.0 1.1 1 0 0 1 1 1 0 Baculovirus LEF-11 protein Phage_ABA_S PF18066.1 ORF53846 - 0.066 13.9 0.0 0.078 13.7 0.0 1.1 1 0 0 1 1 1 0 Phage ABA sandwich domain Holin_SPP1 PF04688.13 ORF53697 - 0.21 11.8 2.1 0.26 11.5 2.1 1.1 1 0 0 1 1 1 0 SPP1 phage holin RseA_C PF03873.13 ORF53647 - 1.7e-19 69.8 4.5 1.7e-19 69.8 4.5 1.9 2 0 0 2 2 2 1 Anti sigma-E protein RseA, C-terminal domain Suppressor_APC PF11414.8 ORF53647 - 0.043 13.9 5.7 0.054 13.6 5.7 1.1 1 0 0 1 1 1 0 Adenomatous polyposis coli tumour suppressor protein Nitrate_red_gam PF02665.14 ORF53447 - 0.059 12.9 1.8 0.067 12.7 1.8 1.0 1 0 0 1 1 1 0 Nitrate reductase gamma subunit CbbQ_C PF08406.10 ORF53179 - 0.048 13.9 0.0 0.059 13.6 0.0 1.2 1 0 0 1 1 1 0 CbbQ/NirQ/NorQ C-terminal Pax2_C PF12403.8 ORF52812 - 0.017 15.2 0.0 0.017 15.2 0.0 1.1 1 0 0 1 1 1 0 Paired-box protein 2 C terminal Dr_adhesin PF12393.8 ORF52812 - 1.3 9.5 6.2 0.51 10.7 0.8 2.7 3 0 0 3 3 3 0 Dr family adhesin FCD PF07729.12 ORF52717 - 0.088 13.2 0.0 0.098 13.1 0.0 1.1 1 0 0 1 1 1 0 FCD domain Holin_BlyA PF05102.12 ORF5212 - 0.0061 16.5 0.2 0.0088 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family zf-C2H2_aberr PF17017.5 ORF52014 - 0.068 13.3 0.2 0.069 13.3 0.2 1.0 1 0 0 1 1 1 0 Aberrant zinc-finger ERGIC_N PF13850.6 ORF51801 - 0.083 13.2 0.2 0.11 12.9 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Requiem_N PF14051.6 ORF51698 - 0.098 12.9 2.5 0.14 12.4 2.5 1.2 1 0 0 1 1 1 0 N-terminal domain of DPF2/REQ. Ebola_NP PF05505.12 ORF5138 - 0.1 10.9 1.5 0.11 10.8 1.5 1.0 1 0 0 1 1 1 0 Ebola nucleoprotein Astro_capsid_p PF12226.8 ORF5138 - 0.12 11.5 3.2 0.12 11.5 3.2 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein COMMD1_N PF17221.3 ORF5108 - 0.0025 18.1 0.4 0.0027 18.0 0.4 1.1 1 0 0 1 1 1 1 COMMD1 N-terminal domain ZapB PF06005.12 ORF5108 - 0.033 14.6 0.6 0.033 14.6 0.6 1.4 2 0 0 2 2 2 0 Cell division protein ZapB DUF4131 PF13567.6 ORF50970 - 0.14 11.8 1.7 0.17 11.6 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF4760 PF15956.5 ORF50116 - 0.13 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4760) IFT57 PF10498.9 ORF49575 - 0.0057 15.7 5.2 0.006 15.6 5.2 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF2935 PF11155.8 ORF49575 - 0.012 15.9 1.4 0.015 15.7 1.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) HAUS-augmin3 PF14932.6 ORF49575 - 0.012 15.2 2.9 0.014 15.0 2.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Spc7 PF08317.11 ORF49575 - 0.019 13.8 3.1 0.021 13.7 3.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein SLATT_5 PF18160.1 ORF49575 - 0.02 14.2 4.7 0.024 14.0 4.7 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 RmuC PF02646.16 ORF49575 - 0.023 13.8 1.0 0.024 13.8 1.0 1.0 1 0 0 1 1 1 0 RmuC family DUF1664 PF07889.12 ORF49575 - 0.028 14.5 1.3 0.031 14.3 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) PMSR PF01625.21 ORF49575 - 0.03 14.5 0.2 0.034 14.3 0.2 1.1 1 0 0 1 1 1 0 Peptide methionine sulfoxide reductase YlqD PF11068.8 ORF49575 - 0.035 14.5 4.2 0.043 14.2 4.2 1.1 1 0 0 1 1 1 0 YlqD protein Spc24 PF08286.11 ORF49575 - 0.037 14.3 3.1 0.042 14.1 3.1 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Fib_alpha PF08702.10 ORF49575 - 0.038 14.2 6.2 0.065 13.4 6.2 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Med9 PF07544.13 ORF49575 - 0.046 13.8 2.2 0.068 13.3 2.2 1.3 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 GrpE PF01025.19 ORF49575 - 0.055 13.1 3.6 0.066 12.9 3.6 1.1 1 0 0 1 1 1 0 GrpE SOGA PF11365.8 ORF49575 - 0.067 14.3 3.6 0.076 14.2 3.6 1.0 1 0 0 1 1 1 0 Protein SOGA DUF4239 PF14023.6 ORF49575 - 0.1 12.3 0.8 0.11 12.2 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF2090 PF09863.9 ORF49575 - 0.1 11.6 0.1 0.1 11.6 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2090) PIF PF05092.12 ORF49327 - 0.24 10.1 0.0 0.26 10.0 0.0 1.0 1 0 0 1 1 1 0 Per os infectivity zf-MIZ PF02891.20 ORF48950 - 0.12 12.1 0.1 0.12 12.1 0.1 2.5 2 1 0 2 2 2 0 MIZ/SP-RING zinc finger IFT46_B_C PF12317.8 ORF48661 - 0.061 13.0 0.5 0.063 13.0 0.5 1.0 1 0 0 1 1 1 0 Intraflagellar transport complex B protein 46 C terminal SUR7 PF06687.12 ORF47264 - 0.095 12.3 3.5 0.096 12.3 3.5 1.1 1 0 0 1 1 1 0 SUR7/PalI family Toxin_24 PF08094.11 ORF4683 - 6.7 6.6 11.3 0.47 10.3 1.8 2.6 3 0 0 3 3 3 0 Conotoxin TVIIA/GS family Peptidase_C74 PF12387.8 ORF46459 - 0.28 10.7 1.5 0.3 10.6 1.5 1.1 1 0 0 1 1 1 0 Pestivirus NS2 peptidase CFC PF09443.10 ORF46421 - 0.026 14.4 2.9 0.053 13.4 2.9 1.6 1 0 0 1 1 1 0 Cripto_Frl-1_Cryptic (CFC) KleE PF17394.2 ORF46170 - 0.028 14.6 0.1 0.033 14.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein Condensin2nSMC PF12422.8 ORF46081 - 0.064 13.4 2.9 0.074 13.2 2.9 1.0 1 0 0 1 1 1 0 Condensin II non structural maintenance of chromosomes subunit Biotin_lipoyl PF00364.22 ORF46045 - 4.7e-12 45.6 0.5 5.3e-12 45.4 0.5 1.1 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 ORF46045 - 0.00019 21.2 0.0 0.0082 16.0 0.0 2.1 1 1 1 2 2 2 2 Biotin-lipoyl like IFT57 PF10498.9 ORF45909 - 0.0057 15.7 5.2 0.006 15.6 5.2 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF2935 PF11155.8 ORF45909 - 0.012 15.9 1.4 0.015 15.7 1.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) HAUS-augmin3 PF14932.6 ORF45909 - 0.012 15.2 2.9 0.014 15.0 2.9 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Spc7 PF08317.11 ORF45909 - 0.019 13.8 3.1 0.021 13.7 3.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein SLATT_5 PF18160.1 ORF45909 - 0.02 14.2 4.7 0.024 14.0 4.7 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 RmuC PF02646.16 ORF45909 - 0.023 13.8 1.0 0.024 13.8 1.0 1.0 1 0 0 1 1 1 0 RmuC family DUF1664 PF07889.12 ORF45909 - 0.028 14.5 1.3 0.031 14.3 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) PMSR PF01625.21 ORF45909 - 0.03 14.5 0.2 0.034 14.3 0.2 1.1 1 0 0 1 1 1 0 Peptide methionine sulfoxide reductase YlqD PF11068.8 ORF45909 - 0.035 14.5 4.2 0.043 14.2 4.2 1.1 1 0 0 1 1 1 0 YlqD protein Spc24 PF08286.11 ORF45909 - 0.037 14.3 3.1 0.042 14.1 3.1 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Fib_alpha PF08702.10 ORF45909 - 0.038 14.2 6.2 0.065 13.4 6.2 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Med9 PF07544.13 ORF45909 - 0.046 13.8 2.2 0.068 13.3 2.2 1.3 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 GrpE PF01025.19 ORF45909 - 0.055 13.1 3.6 0.066 12.9 3.6 1.1 1 0 0 1 1 1 0 GrpE SOGA PF11365.8 ORF45909 - 0.067 14.3 3.6 0.076 14.2 3.6 1.0 1 0 0 1 1 1 0 Protein SOGA DUF4239 PF14023.6 ORF45909 - 0.1 12.3 0.8 0.11 12.2 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF2090 PF09863.9 ORF45909 - 0.1 11.6 0.1 0.1 11.6 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2090) Pox_A9 PF04835.12 ORF4452 - 1.1 9.4 4.2 8.7 6.6 0.0 2.7 2 1 0 2 2 2 0 A9 protein conserved region CsoS2_M PF12288.8 ORF4440 - 0.056 12.8 0.0 0.061 12.7 0.0 1.0 1 0 0 1 1 1 0 Carboxysome shell peptide mid-region Antimicrobial19 PF08225.11 ORF44208 - 0.19 11.4 1.1 1.1 9.0 0.1 2.2 1 1 1 2 2 2 0 Pseudin antimicrobial peptide TMEM132D_C PF15706.5 ORF44208 - 0.52 10.1 1.4 0.68 9.8 1.4 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term GLYCAM-1 PF05242.11 ORF43401 - 0.028 14.6 0.6 0.035 14.2 0.6 1.1 1 0 0 1 1 1 0 Glycosylation-dependent cell adhesion molecule 1 (GlyCAM-1) B12-binding PF02310.19 ORF43367 - 0.19 11.8 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 B12 binding domain IMPa_helical PF18642.1 ORF43312 - 0.07 13.6 0.7 0.083 13.3 0.7 1.1 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain SID-1_RNA_chan PF13965.6 ORF43033 - 0.12 10.7 0.0 0.15 10.5 0.0 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Glyco_tranf_2_2 PF10111.9 ORF42638 - 0.03 13.8 0.2 0.031 13.8 0.2 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family 2 FAM167 PF11652.8 ORF42548 - 0.013 16.0 0.7 0.016 15.6 0.7 1.3 1 1 0 1 1 1 0 FAM167 bPH_4 PF06713.11 ORF42548 - 0.038 14.1 0.2 0.047 13.8 0.2 1.2 1 0 0 1 1 1 0 Bacterial PH domain Arm-DNA-bind_2 PF12167.8 ORF42548 - 0.14 12.1 1.8 0.17 11.8 1.4 1.5 1 1 0 1 1 1 0 Arm DNA-binding domain Keratin_B2_2 PF13885.6 ORF41764 - 0.86 9.6 10.0 1.6 8.8 5.0 2.2 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein RRM_2 PF04059.12 ORF41508 - 1.5e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 NB PF04159.13 ORF41126 - 0.78 9.8 6.9 0.82 9.7 6.9 1.1 1 0 0 1 1 1 0 NB glycoprotein DUF1869 PF08956.10 ORF41093 - 1.2e-31 108.4 1.7 1.4e-31 108.2 1.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1869) DUF11 PF01345.18 ORF41093 - 0.15 12.4 3.5 0.18 12.1 2.9 1.4 1 1 1 2 2 2 0 Domain of unknown function DUF11 Orthoreo_P10 PF07204.11 ORF41064 - 0.055 13.4 0.1 0.088 12.8 0.1 1.3 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 LMBR1 PF04791.16 ORF40497 - 0.26 10.2 2.1 0.25 10.2 2.1 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF295 PF03478.18 ORF39958 - 0.087 12.4 0.5 0.11 12.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF295) MipZ PF09140.11 ORF39805 - 0.06 12.6 0.1 0.06 12.6 0.1 1.1 1 0 0 1 1 1 0 ATPase MipZ DUF4131 PF13567.6 ORF39751 - 3.8 7.1 13.0 4.4 6.9 13.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2304 PF10066.9 ORF39479 - 0.015 15.5 3.3 0.018 15.3 3.3 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) PetN PF03742.14 ORF39479 - 1.2 9.0 5.7 2 8.4 3.3 2.1 2 0 0 2 2 2 0 PetN Transposase_20 PF02371.16 ORF39454 - 0.78 10.1 4.8 1.2 9.5 2.6 1.9 1 1 1 2 2 2 0 Transposase IS116/IS110/IS902 family Gly-rich_Ago1 PF12764.7 ORF39178 - 0.015 16.1 3.4 0.016 16.0 3.4 1.1 1 0 0 1 1 1 0 Glycine-rich region of argonaut DUF2417 PF10329.9 ORF38804 - 0.34 10.3 9.7 0.37 10.2 9.7 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Pox_P21 PF05313.12 ORF38804 - 0.41 10.2 7.1 0.41 10.2 7.1 1.0 1 0 0 1 1 1 0 Poxvirus P21 membrane protein Fis1_TPR_N PF14852.6 ORF38245 - 0.059 13.1 0.6 0.091 12.5 0.6 1.3 1 0 0 1 1 1 0 Fis1 N-terminal tetratricopeptide repeat SID-1_RNA_chan PF13965.6 ORF36990 - 0.12 10.7 0.0 0.15 10.5 0.0 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 TetR_C_31 PF17940.1 ORF36556 - 0.085 13.1 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF903 PF06004.12 ORF36089 - 4.8e-25 87.2 4.8 5.7e-25 87.0 4.8 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF903) Pirin PF02678.16 ORF36089 - 0.12 12.4 0.1 0.13 12.2 0.1 1.3 1 1 0 1 1 1 0 Pirin EF-hand_7 PF13499.6 ORF35987 - 8.6e-11 42.1 0.2 1.2e-10 41.7 0.2 1.2 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF35987 - 1.8e-09 36.4 1.8 0.0013 18.1 0.2 2.6 2 1 1 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF35987 - 6.3e-08 32.4 1.5 1.8e-07 30.9 0.2 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF35987 - 6.5e-08 31.9 2.1 0.0022 17.8 0.2 2.5 2 1 1 3 3 3 2 EF-hand domain EF-hand_9 PF14658.6 ORF35987 - 3.5e-05 24.0 0.0 4.4e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF35987 - 0.001 18.5 3.1 0.26 10.9 0.1 3.0 2 1 1 3 3 3 2 EF hand KleE PF17394.2 ORF35795 - 0.028 14.6 0.1 0.033 14.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein zf-TRM13_CCCH PF11722.8 ORF35668 - 0.023 14.4 0.1 0.056 13.2 0.1 1.7 1 0 0 1 1 1 0 CCCH zinc finger in TRM13 protein Toxin_11 PF07473.11 ORF34722 - 0.012 15.6 1.2 0.02 15.0 1.2 1.3 1 0 0 1 1 1 0 Spasmodic peptide gm9a; conotoxin from Conus species Gaa1 PF04114.14 ORF3451 - 0.018 14.1 0.6 0.02 13.9 0.6 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component ER_lumen_recept PF00810.18 ORF3451 - 0.032 15.1 1.4 0.036 14.9 1.4 1.1 1 0 0 1 1 1 0 ER lumen protein retaining receptor EF-hand_1 PF00036.32 ORF34340 - 6.5e-18 62.9 1.1 1.5e-09 36.7 0.3 2.2 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF34340 - 2.3e-15 55.2 1.3 1.5e-06 27.6 0.0 2.6 1 1 2 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF34340 - 1.3e-14 52.9 2.5 2.6e-06 26.7 0.2 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF34340 - 5.5e-14 52.4 0.2 6.9e-14 52.1 0.2 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF34340 - 4.4e-11 42.5 1.3 3e-07 30.2 0.2 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF34340 - 4.4e-05 23.4 0.1 4.6e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF34340 - 0.00016 21.9 0.0 0.00021 21.5 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF34340 - 0.0029 17.9 0.0 0.0039 17.5 0.0 1.3 1 1 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region DUF4309 PF14172.6 ORF34340 - 0.072 13.1 0.0 0.087 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) Dockerin_1 PF00404.18 ORF34340 - 0.078 13.2 0.4 1.2 9.4 0.5 2.1 1 1 0 1 1 1 0 Dockerin type I domain EF-hand_10 PF14788.6 ORF34340 - 0.11 12.3 0.1 0.18 11.7 0.0 1.4 1 1 0 1 1 1 0 EF hand Defensin_1 PF00323.19 ORF34247 - 0.36 11.4 9.5 5.4 7.7 0.3 2.4 2 0 0 2 2 2 0 Mammalian defensin GrpE PF01025.19 ORF32341 - 0.08 12.6 3.0 0.099 12.3 3.0 1.1 1 0 0 1 1 1 0 GrpE Med25 PF11232.8 ORF32258 - 0.0068 16.4 1.5 0.0071 16.3 1.5 1.0 1 0 0 1 1 1 1 Mediator complex subunit 25 PTOV activation and synapsin 2 DUF3970 PF13113.6 ORF32258 - 0.12 12.6 0.1 0.36 11.1 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3970) EI24 PF07264.11 ORF3209 - 3.9e-10 40.3 0.1 4.6e-10 40.0 0.1 1.1 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) DUF2678 PF10856.8 ORF3209 - 0.052 13.5 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) PdxJ PF03740.13 ORF31763 - 3.9e-32 111.2 1.1 4.3e-32 111.1 1.1 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthesis protein PdxJ Flexi_CP PF00286.20 ORF31374 - 0.17 11.8 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Viral coat protein DUF1270 PF06900.11 ORF31307 - 0.047 14.1 0.1 0.081 13.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1270) DUF4139 PF13598.6 ORF31246 - 0.04 13.6 0.0 0.042 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) DUF3880 PF12996.7 ORF31246 - 0.068 13.2 0.0 0.073 13.2 0.0 1.3 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) ABC2_membrane_3 PF12698.7 ORF31028 - 0.85 8.7 8.9 0.85 8.7 8.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein CIA30 PF08547.12 ORF30845 - 0.071 13.1 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) REGB_T4 PF10715.9 ORF30534 - 0.003 17.8 0.2 0.0034 17.6 0.2 1.0 1 0 0 1 1 1 1 T4-page Endoribonuclease RegB Sensor_TM1 PF13755.6 ORF30053 - 0.022 14.5 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain Noelin-1 PF12308.8 ORF30053 - 0.13 12.3 3.9 0.14 12.1 3.9 1.1 1 0 0 1 1 1 0 Neurogenesis glycoprotein P35 PF02331.15 ORF30053 - 0.15 11.4 2.6 0.16 11.3 2.6 1.0 1 0 0 1 1 1 0 Apoptosis preventing protein DUF902 PF06001.13 ORF28436 - 0.16 12.5 6.0 0.23 11.9 2.1 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF902) SYCE1 PF15233.6 ORF28194 - 0.076 13.1 5.0 0.61 10.1 2.6 2.0 1 1 1 2 2 2 0 Synaptonemal complex central element protein 1 Antimicrobial19 PF08225.11 ORF27624 - 0.19 11.4 1.1 1.1 9.0 0.1 2.2 1 1 1 2 2 2 0 Pseudin antimicrobial peptide TMEM132D_C PF15706.5 ORF27624 - 0.52 10.1 1.4 0.68 9.8 1.4 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term RNA_capsid PF03035.14 ORF27242 - 0.031 14.3 0.3 0.038 14.0 0.3 1.2 1 0 0 1 1 1 0 Calicivirus putative RNA polymerase/capsid protein LPP PF04728.13 ORF27242 - 0.2 12.1 1.7 0.3 11.5 1.7 1.6 1 1 0 1 1 1 0 Lipoprotein leucine-zipper Transposon_TraM PF12508.8 ORF25869 - 0.12 12.0 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Conjugative transposon, TraM Adeno_PV PF03910.13 ORF25094 - 0.013 14.2 0.1 0.013 14.2 0.1 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV DUF1247 PF06851.11 ORF24875 - 0.23 11.4 3.9 0.33 10.9 3.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1247) TRH PF05438.12 ORF24626 - 0.11 12.3 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Thyrotropin-releasing hormone (TRH) NeuB PF03102.14 ORF24314 - 0.063 12.7 0.0 0.068 12.6 0.0 1.0 1 0 0 1 1 1 0 NeuB family v110 PF01639.17 ORF24160 - 0.011 15.6 0.7 0.013 15.4 0.7 1.1 1 0 0 1 1 1 0 Viral family 110 C6_DPF PF10170.9 ORF24160 - 1.7 9.1 9.5 19 5.7 6.8 2.1 1 1 1 2 2 2 0 Cysteine-rich domain CBF PF03914.17 ORF23870 - 0.029 14.4 0.4 0.031 14.3 0.4 1.1 1 0 0 1 1 1 0 CBF/Mak21 family Meleagrin PF08189.11 ORF23550 - 0.92 9.3 7.1 0.33 10.7 4.0 1.8 2 0 0 2 2 2 0 Meleagrin/Cygnin family Utp13 PF08625.11 ORF23034 - 0.00018 21.4 0.3 0.00028 20.8 0.3 1.3 1 0 0 1 1 1 1 Utp13 specific WD40 associated domain Sas6_CC PF18594.1 ORF23034 - 0.9 9.4 5.5 1.3 8.8 2.1 2.4 2 0 0 2 2 2 0 Sas6/XLF/XRCC4 coiled-coil domain COX7a PF02238.15 ORF2289 - 0.048 14.1 0.6 0.53 10.7 0.2 2.0 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII Ribosomal_S7 PF00177.21 ORF22837 - 0.12 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S7p/S5e Toxin_16 PF07945.11 ORF22487 - 0.086 12.7 3.1 0.086 12.7 3.1 2.4 3 0 0 3 3 3 0 Janus-atracotoxin CDC24 PF06395.11 ORF22177 - 0.11 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 CDC24 Calponin DUF2163 PF09931.9 ORF22161 - 0.0012 19.1 0.4 0.0013 18.9 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2163) FAM199X PF15814.5 ORF21773 - 9.7 5.1 10.9 10 5.1 10.9 1.0 1 0 0 1 1 1 0 Protein family FAM199X FSA_C PF10479.9 ORF21773 - 10 4.1 8.2 10 4.1 8.2 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus NOD PF06816.13 ORF21319 - 0.038 13.6 0.1 0.051 13.2 0.1 1.1 1 0 0 1 1 1 0 NOTCH protein DUF5091 PF17012.5 ORF21170 - 0.057 13.7 0.2 0.057 13.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5091) Exo_endo_phos PF03372.23 ORF20552 - 0.024 14.1 0.3 0.027 14.0 0.3 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Colicin PF01024.19 ORF19795 - 0.23 11.4 1.0 0.25 11.2 1.0 1.0 1 0 0 1 1 1 0 Colicin pore forming domain Glyco_hydro_127 PF07944.12 ORF19446 - 0.19 10.2 0.2 0.18 10.3 0.2 1.0 1 0 0 1 1 1 0 Beta-L-arabinofuranosidase, GH127 Holin_BlyA PF05102.12 ORF19262 - 0.0061 16.5 0.2 0.0088 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family UQ_con PF00179.26 ORF18646 - 0.00018 21.2 0.0 0.00021 20.9 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme zf-FLZ PF04570.14 ORF18646 - 0.077 12.5 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 DUF2206 PF09971.9 ORF18579 - 0.14 10.9 3.3 0.15 10.8 3.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) RITA PF17066.5 ORF18446 - 0.004 16.8 0.1 0.004 16.8 0.1 1.2 1 0 0 1 1 1 1 RBPJ-interacting and tubulin associated protein GTP_cyclohydro2 PF00925.20 ORF18325 - 0.15 11.6 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase II V1R PF03402.14 ORF18154 - 0.13 11.9 0.0 0.14 11.7 0.0 1.0 1 0 0 1 1 1 0 Vomeronasal organ pheromone receptor family, V1R CIA30 PF08547.12 ORF17863 - 0.071 13.1 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Complex I intermediate-associated protein 30 (CIA30) MORN PF02493.20 ORF17487 - 0.14 12.2 1.2 0.14 12.1 0.1 1.6 2 0 0 2 2 2 0 MORN repeat DUF3446 PF11928.8 ORF1739 - 0.017 15.4 3.7 0.02 15.2 3.7 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain ADP_PFK_GK PF04587.15 ORF16800 - 0.08 11.5 0.1 0.088 11.4 0.1 1.0 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region TPK_catalytic PF04263.16 ORF152640 - 0.051 13.6 0.0 0.055 13.5 0.0 1.2 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain Cdc13_OB2 PF18691.1 ORF152372 - 0.029 14.5 4.1 0.063 13.3 4.1 1.6 1 1 0 1 1 1 0 Cell division control protein 13, OB2 domain DUF1548 PF07579.11 ORF152171 - 0.059 13.7 0.1 0.068 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) DUF3551 PF12071.8 ORF151927 - 0.075 13.1 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3551) DUF5341 PF17276.2 ORF151927 - 0.1 12.8 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5341) zf-CCCH PF00642.24 ORF150986 - 7.8e-13 48.0 8.5 3e-09 36.5 0.7 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF150986 - 4.2e-07 29.8 14.8 2e-05 24.5 1.9 2.2 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF150986 - 6.2e-05 22.7 11.7 0.0005 19.8 1.3 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_2 PF14608.6 ORF150986 - 0.0073 16.7 12.1 0.046 14.2 0.9 2.6 2 1 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Torus PF16131.5 ORF150986 - 0.027 15.2 7.1 0.069 13.9 0.6 2.1 1 1 1 2 2 2 0 Torus domain PRIMA1 PF16101.5 ORF150614 - 2.8 8.0 9.0 3.2 7.8 9.0 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 NSP11 PF06471.12 ORF150503 - 0.14 10.6 0.1 0.13 10.7 0.1 1.0 1 0 0 1 1 1 0 NSP11 Phage_P2_GpU PF06995.11 ORF150467 - 0.075 12.6 0.2 0.087 12.4 0.2 1.0 1 0 0 1 1 1 0 Phage P2 GpU GrpE PF01025.19 ORF149841 - 0.08 12.6 3.0 0.099 12.3 3.0 1.1 1 0 0 1 1 1 0 GrpE DUF1068 PF06364.12 ORF149355 - 7.6 6.4 11.7 16 5.3 11.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1068) Ribosomal_L32p PF01783.23 ORF149068 - 0.0088 16.3 0.5 0.013 15.8 0.5 1.2 1 0 0 1 1 1 1 Ribosomal L32p protein family SCHIP-1 PF10148.9 ORF148497 - 7.6 6.1 6.6 7.7 6.0 6.6 1.1 1 0 0 1 1 1 0 Schwannomin-interacting protein 1 SAPI PF16560.5 ORF14848 - 0.12 11.9 0.1 0.13 11.8 0.1 1.0 1 0 0 1 1 1 0 Putative mobile pathogenicity island Colicin PF01024.19 ORF147803 - 0.23 11.4 1.0 0.25 11.2 1.0 1.0 1 0 0 1 1 1 0 Colicin pore forming domain Herpes_UL4 PF03277.13 ORF147275 - 0.014 15.0 0.1 0.016 14.8 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus UL4 family Calsequestrin PF01216.17 ORF147192 - 0.12 11.4 0.1 0.13 11.2 0.1 1.0 1 0 0 1 1 1 0 Calsequestrin Bunya_NS-S_2 PF03231.13 ORF14585 - 0.064 12.0 0.0 0.067 12.0 0.0 1.0 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-S Peptidase_C7 PF01830.18 ORF145758 - 0.066 12.6 0.1 0.07 12.5 0.1 1.1 1 0 0 1 1 1 0 Peptidase C7 family DUF4051 PF13260.6 ORF14434 - 0.007 16.1 2.0 0.0099 15.6 2.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4051) CagS PF16707.5 ORF14434 - 0.04 13.9 0.1 0.047 13.7 0.1 1.0 1 0 0 1 1 1 0 Cag pathogenicity island protein S of Helicobacter pylori PufQ PF05398.11 ORF14434 - 0.052 13.7 0.1 0.062 13.4 0.1 1.1 1 0 0 1 1 1 0 PufQ cytochrome subunit CENP-H PF05837.12 ORF144091 - 0.0005 20.5 1.5 0.00054 20.3 1.5 1.1 1 0 0 1 1 1 1 Centromere protein H (CENP-H) TolA_bind_tri PF16331.5 ORF144091 - 0.00067 19.7 0.2 0.0013 18.7 0.1 1.5 1 1 0 1 1 1 1 TolA binding protein trimerisation ZapB PF06005.12 ORF144091 - 0.00073 19.9 1.1 0.00092 19.6 1.1 1.2 1 0 0 1 1 1 1 Cell division protein ZapB bZIP_1 PF00170.21 ORF144091 - 0.0024 17.9 0.9 0.0024 17.9 0.9 1.8 1 1 1 2 2 2 1 bZIP transcription factor CASP_C PF08172.12 ORF144091 - 0.0076 15.6 0.4 0.0084 15.5 0.4 1.0 1 0 0 1 1 1 1 CASP C terminal Spc7 PF08317.11 ORF144091 - 0.009 14.9 1.7 0.0099 14.8 1.7 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Anillin_N PF16018.5 ORF144091 - 0.013 16.0 0.2 0.029 15.0 0.0 1.6 2 0 0 2 2 2 0 Anillin N-terminus YabA PF06156.13 ORF144091 - 0.014 16.0 1.7 0.016 15.9 1.7 1.1 1 0 0 1 1 1 0 Initiation control protein YabA Herpes_UL6 PF01763.16 ORF144091 - 0.022 13.3 1.2 0.023 13.2 1.2 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like FlaC_arch PF05377.11 ORF144091 - 0.027 14.9 1.9 0.029 14.8 0.4 1.7 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DivIC PF04977.15 ORF144091 - 0.036 13.9 0.5 0.043 13.6 0.5 1.2 1 0 0 1 1 1 0 Septum formation initiator TSC22 PF01166.18 ORF144091 - 0.051 13.9 0.4 0.078 13.3 0.3 1.4 1 1 0 1 1 1 0 TSC-22/dip/bun family Nbas_N PF15492.6 ORF143767 - 0.02 14.2 0.0 0.022 14.1 0.0 1.0 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal Topo-VIb_trans PF09239.11 ORF143663 - 0.034 14.0 0.3 0.041 13.7 0.3 1.0 1 0 0 1 1 1 0 Topoisomerase VI B subunit, transducer Resistin PF06954.11 ORF142747 - 0.071 13.7 2.5 0.077 13.6 0.5 1.9 1 1 1 2 2 2 0 Resistin HpaP PF09483.10 ORF142673 - 0.013 15.7 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Type III secretion protein (HpaP) Adeno_PV PF03910.13 ORF142673 - 0.15 10.7 0.6 0.15 10.7 0.6 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV RecO_C PF02565.15 ORF141723 - 0.57 10.0 1.9 0.66 9.8 1.9 1.1 1 0 0 1 1 1 0 Recombination protein O C terminal DUF1039 PF06287.11 ORF141722 - 0.089 13.2 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1039) Zn_peptidase_2 PF04298.12 ORF141722 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase DUF489 PF04356.12 ORF140591 - 0.0023 17.9 0.0 0.0025 17.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF489) BAR PF03114.18 ORF140591 - 0.0052 16.5 0.0 0.006 16.3 0.0 1.2 1 0 0 1 1 1 1 BAR domain ING PF12998.7 ORF140591 - 0.025 15.2 0.0 0.028 15.0 0.0 1.1 1 0 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding Occludin_ELL PF07303.13 ORF140591 - 0.046 14.4 0.0 0.052 14.3 0.0 1.1 1 0 0 1 1 1 0 Occludin homology domain Bac_RepA_C PF18008.1 ORF140591 - 0.057 13.8 0.0 0.065 13.6 0.0 1.1 1 0 0 1 1 1 0 Replication initiator protein A C-terminal domain Spectrin PF00435.21 ORF140591 - 0.13 12.8 0.0 0.15 12.6 0.0 1.0 1 0 0 1 1 1 0 Spectrin repeat Endothelin PF00322.17 ORF140156 - 0.47 10.1 2.1 0.67 9.6 2.1 1.2 1 0 0 1 1 1 0 Endothelin family DUF4820 PF16091.5 ORF140089 - 0.029 13.8 0.5 0.03 13.7 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) TRAM1 PF08390.11 ORF139610 - 0.0076 15.9 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 TRAM1-like protein DUF1773 PF08593.10 ORF139277 - 0.088 13.9 0.0 0.15 13.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function Antimicrobial_5 PF08026.11 ORF139177 - 0.043 13.9 1.1 0.064 13.3 1.1 1.3 1 0 0 1 1 1 0 Bee antimicrobial peptide CbbQ_C PF08406.10 ORF137398 - 0.048 13.9 0.0 0.059 13.6 0.0 1.2 1 0 0 1 1 1 0 CbbQ/NirQ/NorQ C-terminal Dimer_Tnp_hAT PF05699.14 ORF137291 - 0.7 9.7 7.7 0.073 12.9 3.2 1.6 2 0 0 2 2 2 0 hAT family C-terminal dimerisation region Holin_BlyA PF05102.12 ORF136277 - 0.0061 16.5 0.2 0.0088 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family Ribosomal_L13e PF01294.18 ORF135527 - 0.00058 19.8 0.5 0.00064 19.6 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L13e NADH_4Fe-4S PF10589.9 ORF135416 - 0.062 13.4 3.4 0.087 12.9 3.4 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TMEM132D_C PF15706.5 ORF135248 - 0.0017 18.1 0.5 0.0025 17.6 0.3 1.3 1 1 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF1180 PF06679.12 ORF135248 - 9.7 6.6 7.2 11 6.4 7.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) PRIMA1 PF16101.5 ORF134647 - 2.8 8.0 9.0 3.2 7.8 9.0 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 RRM_2 PF04059.12 ORF134438 - 1.5e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 zf-C6H2 PF15801.5 ORF134339 - 0.32 11.4 0.2 0.32 11.4 0.2 1.7 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding CENP-P PF13096.6 ORF134260 - 0.038 13.7 0.3 0.038 13.7 0.3 1.1 1 0 0 1 1 1 0 CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P P66_CC PF16563.5 ORF133478 - 0.068 12.8 8.0 1.3 8.7 0.7 2.9 3 0 0 3 3 3 0 Coiled-coil and interaction region of P66A and P66B with MBD2 HSA PF07529.13 ORF132894 - 0.017 15.4 0.3 0.017 15.4 0.3 1.9 2 0 0 2 2 2 0 HSA DUF3106 PF11304.8 ORF132894 - 0.039 14.4 0.2 0.053 14.0 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3106) Phe_tRNA-synt_N PF02912.18 ORF132894 - 0.067 13.1 1.9 0.22 11.5 0.1 2.0 2 0 0 2 2 2 0 Aminoacyl tRNA synthetase class II, N-terminal domain DSPc PF00782.20 ORF13250 - 1.7e-06 27.9 0.0 1.9e-06 27.7 0.0 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 ORF13250 - 6.8e-06 26.2 0.0 7.3e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 ORF13250 - 0.0036 16.9 0.0 0.0039 16.8 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase2 PF03162.13 ORF13250 - 0.026 14.1 0.0 0.029 14.0 0.0 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family Syntaxin-18_N PF10496.9 ORF131205 - 0.18 12.1 0.2 2.2 8.6 0.0 2.4 2 1 1 3 3 3 0 SNARE-complex protein Syntaxin-18 N-terminus BRCA-2_OB3 PF09104.10 ORF129988 - 0.048 13.3 0.1 0.062 13.0 0.1 1.2 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 LysR_substrate PF03466.20 ORF129521 - 0.11 11.9 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 LysR substrate binding domain zinc_ribbon_4 PF13717.6 ORF129334 - 0.047 13.6 0.3 0.076 13.0 0.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain HCV_NS1 PF01560.17 ORF129334 - 0.058 12.1 0.3 0.067 11.9 0.3 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein E2/NS1 F-box-like PF12937.7 ORF128919 - 0.00023 21.0 0.0 0.00037 20.3 0.0 1.3 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 ORF128919 - 0.11 12.5 0.1 0.28 11.1 0.0 1.6 2 0 0 2 2 2 0 F-box domain PIF PF05092.12 ORF128856 - 0.24 10.1 0.0 0.26 10.0 0.0 1.0 1 0 0 1 1 1 0 Per os infectivity Holin_SPP1 PF04688.13 ORF128295 - 0.21 11.8 2.1 0.26 11.5 2.1 1.1 1 0 0 1 1 1 0 SPP1 phage holin Thionin PF00321.17 ORF127913 - 1.2 9.7 7.6 17 6.0 0.2 2.6 2 1 0 2 2 2 0 Plant thionin DUF5405 PF17399.2 ORF127411 - 0.068 13.4 0.2 0.081 13.2 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5405) DUF2206 PF09971.9 ORF127362 - 0.14 10.9 3.3 0.15 10.8 3.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) Ig_6 PF18452.1 ORF126343 - 0.1 12.2 0.5 0.2 11.2 0.5 1.4 1 0 0 1 1 1 0 Immunoglobulin domain B12-binding PF02310.19 ORF125666 - 0.19 11.8 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 B12 binding domain RXLR_WY PF18634.1 ORF124870 - 0.055 13.4 0.7 0.11 12.5 0.0 1.8 2 0 0 2 2 2 0 RXLR phytopathogen effector protein WY-domain STAG PF08514.11 ORF124867 - 0.42 10.5 3.9 0.2 11.6 1.1 1.7 1 1 0 2 2 2 0 STAG domain Stevor PF17410.2 ORF123739 - 0.0053 16.4 0.1 0.0053 16.4 0.1 1.1 1 0 0 1 1 1 1 Subtelomeric Variable Open Reading frame Rsm22 PF09243.10 ORF12316 - 2.4 7.4 4.3 2.6 7.3 4.3 1.1 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 SAPI PF16560.5 ORF123076 - 0.12 11.9 0.1 0.13 11.8 0.1 1.0 1 0 0 1 1 1 0 Putative mobile pathogenicity island DUF1512 PF07431.12 ORF123071 - 0.2 10.6 3.1 0.21 10.6 3.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1512) Holin_BlyA PF05102.12 ORF122983 - 0.0061 16.5 0.2 0.0088 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family Molydop_binding PF01568.21 ORF121493 - 1.5e-13 50.7 0.0 1.7e-13 50.5 0.0 1.0 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Holin_BlyA PF05102.12 ORF121371 - 0.0061 16.5 0.2 0.0088 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family DUF432 PF04254.13 ORF120812 - 0.064 13.4 0.0 0.073 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF432) Leader_CPA1 PF08252.11 ORF120752 - 0.066 12.6 1.3 0.14 11.6 1.3 1.5 1 0 0 1 1 1 0 arg-2/CPA1 leader peptide Microvir_lysis PF04517.12 ORF119898 - 1.5 8.8 6.6 0.26 11.2 1.4 2.0 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus Toxin_16 PF07945.11 ORF119661 - 0.086 12.7 3.1 0.086 12.7 3.1 2.4 3 0 0 3 3 3 0 Janus-atracotoxin Aa_trans PF01490.18 ORF119598 - 0.0052 15.5 0.0 0.0058 15.4 0.0 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein FAM209 PF15206.6 ORF119598 - 0.034 14.0 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 FAM209 family MRP-S28 PF10213.9 ORF11917 - 0.022 15.2 0.1 0.023 15.1 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit protein AAA_26 PF13500.6 ORF118469 - 0.0036 17.2 0.0 0.0047 16.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain Holin_SPP1 PF04688.13 ORF117203 - 0.21 11.8 2.1 0.26 11.5 2.1 1.1 1 0 0 1 1 1 0 SPP1 phage holin HTH_50 PF18024.1 ORF11716 - 0.13 11.9 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF35_N PF12172.8 ORF11716 - 3.7 7.5 10.2 3.8 7.5 0.1 2.8 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) NiFe_hyd_SSU_C PF14720.6 ORF116772 - 0.007 16.7 1.1 0.011 16.1 1.1 1.3 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal Peptidase_C13 PF01650.18 ORF116772 - 0.03 13.8 0.2 0.03 13.8 0.2 1.0 1 0 0 1 1 1 0 Peptidase C13 family AWPM-19 PF05512.11 ORF116764 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 AWPM-19-like family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks356.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks356.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks356.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks356.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:23:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Tho2 PF11262.8 ORF116343 - 0.17 11.1 1.6 0.17 11.1 1.6 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 GN3L_Grn1 PF08701.11 ORF115545 - 0.31 11.2 9.6 0.4 10.8 9.6 1.2 1 0 0 1 1 1 0 GNL3L/Grn1 putative GTPase NosD PF05048.13 ORF11527 - 9.1e-06 25.1 2.7 9.7e-06 25.0 2.7 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 ORF11527 - 0.00016 21.5 5.1 0.015 15.1 0.9 1.7 1 1 1 2 2 2 2 Right handed beta helix region ADP_PFK_GK PF04587.15 ORF115185 - 0.08 11.5 0.1 0.088 11.4 0.1 1.0 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region DUF1548 PF07579.11 ORF114434 - 0.059 13.7 0.1 0.068 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) DUF2206 PF09971.9 ORF114226 - 0.14 10.9 3.3 0.15 10.8 3.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) US2 PF02476.15 ORF113806 - 0.02 15.6 0.0 0.034 14.8 0.0 1.4 1 0 0 1 1 1 0 US2 family Sec62 PF03839.16 ORF113439 - 4.2 6.8 9.5 4.8 6.6 9.5 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Zn_peptidase_2 PF04298.12 ORF113439 - 5.9 6.2 4.7 7.2 6.0 4.7 1.1 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase SCP2 PF02036.17 ORF113157 - 1.9e-06 28.3 0.0 3.3e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 SCP-2 sterol transfer family DUF903 PF06004.12 ORF113125 - 0.047 13.6 2.0 0.047 13.6 2.0 2.2 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF903) DUF1796 PF08795.10 ORF113125 - 0.057 13.4 0.3 0.062 13.3 0.3 1.0 1 0 0 1 1 1 0 Putative papain-like cysteine peptidase (DUF1796) DUF3332 PF11810.8 ORF113125 - 0.06 13.0 0.7 0.064 12.9 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) MPS2 PF17060.5 ORF112060 - 0.061 12.6 0.3 0.067 12.4 0.3 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 Ribophorin_II PF05817.14 ORF112010 - 4.6 5.7 7.9 4.5 5.7 7.9 1.0 1 0 0 1 1 1 0 Oligosaccharyltransferase subunit Ribophorin II Phytochelatin PF05023.14 ORF111755 - 9.7e-24 83.8 0.0 1.1e-23 83.6 0.0 1.0 1 0 0 1 1 1 1 Phytochelatin synthase NADH_dehy_S2_C PF06444.11 ORF111636 - 0.1 13.1 2.4 0.18 12.3 2.4 1.5 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus Ku_C PF03730.14 ORF111271 - 0.007 17.0 0.1 0.0077 16.9 0.1 1.1 1 0 0 1 1 1 1 Ku70/Ku80 C-terminal arm Metal_resist PF13801.6 ORF110152 - 0.19 11.9 6.0 0.043 14.0 3.1 1.4 2 0 0 2 2 2 0 Heavy-metal resistance CDP-OH_P_tran_2 PF08009.11 ORF109912 - 0.092 12.7 0.2 0.13 12.2 0.2 1.2 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase 2 UPF0139 PF03669.13 ORF109634 - 1.5 8.7 8.6 2.2 8.2 7.8 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0139) YgaB PF14182.6 ORF109241 - 0.0093 16.3 0.6 0.01 16.2 0.6 1.1 1 0 0 1 1 1 1 YgaB-like protein DUF5082 PF16888.5 ORF108603 - 0.024 14.9 2.0 0.029 14.7 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) PND PF17949.1 ORF108430 - 0.035 14.3 0.5 0.045 14.0 0.5 1.1 1 0 0 1 1 1 0 FANCM pseudonuclease domain DUF1548 PF07579.11 ORF108414 - 0.059 13.7 0.1 0.068 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1548) Ank_2 PF12796.7 ORF10837 - 2.5e-14 53.6 0.4 1e-11 45.3 0.1 1.9 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF10837 - 2e-12 47.1 2.0 2.3e-08 34.1 0.6 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF10837 - 6.9e-11 42.5 0.5 7.3e-05 23.2 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF10837 - 3.2e-09 36.8 2.4 0.008 16.6 0.2 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF10837 - 5.3e-08 32.5 0.1 0.002 18.5 0.0 3.1 3 0 0 3 3 3 2 Ankyrin repeat cNMP_binding PF00027.29 ORF10774 - 2.9e-11 43.3 0.0 3.3e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Adeno_E1A PF02703.14 ORF107730 - 0.32 10.6 4.3 0.33 10.5 4.3 1.0 1 0 0 1 1 1 0 Early E1A protein Ldl_recept_a PF00057.18 ORF107730 - 0.55 10.5 0.3 0.55 10.5 0.3 2.7 3 1 0 3 3 3 0 Low-density lipoprotein receptor domain class A YqhR PF11085.8 ORF107608 - 0.059 13.3 0.1 0.066 13.1 0.1 1.1 1 0 0 1 1 1 0 Conserved membrane protein YqhR SPA PF08616.10 ORF107225 - 0.017 15.1 0.1 0.021 14.8 0.1 1.2 1 0 0 1 1 1 0 Stabilization of polarity axis RRM_2 PF04059.12 ORF107056 - 1.5e-08 34.8 0.0 2.2e-08 34.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 DUF1580 PF07618.11 ORF106598 - 0.15 11.7 2.1 0.26 11.0 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1580) NS3_envE PF02723.14 ORF105779 - 0.079 13.0 3.4 0.1 12.7 3.4 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Glyco_transf_11 PF01531.16 ORF105769 - 0.042 13.0 0.1 0.043 13.0 0.1 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 11 Holin_BlyA PF05102.12 ORF105056 - 0.0061 16.5 0.2 0.0088 16.0 0.2 1.3 1 0 0 1 1 1 1 holin, BlyA family DUF295 PF03478.18 ORF104682 - 0.087 12.4 0.5 0.11 12.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF295) Glycoprotein_G PF00802.19 ORF104073 - 0.3 10.4 3.1 0.36 10.1 3.1 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G MSA-2c PF12238.8 ORF103505 - 8.9 6.3 8.3 8.7 6.3 8.3 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c DUF1069 PF06370.11 ORF101861 - 0.074 12.6 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1069) PrsW-protease PF13367.6 ORF101792 - 0.043 13.3 0.0 0.049 13.1 0.0 1.0 1 0 0 1 1 1 0 PrsW family intramembrane metalloprotease NOB1_Zn_bind PF08772.11 ORF101510 - 0.0064 16.6 0.9 0.0077 16.4 0.9 1.2 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like PAP_central PF04928.17 ORF100274 - 0.33 9.9 0.9 0.36 9.8 0.9 1.1 1 0 0 1 1 1 0 Poly(A) polymerase central domain zf-CCCH_2 PF14608.6 NODE_70896_length_223_cov_0.840426_g62955_i0forward_frame_1 - 1.2 9.7 6.0 2.1 8.9 0.1 3.2 3 1 0 3 3 3 0 RNA-binding, Nab2-type zinc finger Tmemb_40 PF10160.9 NODE_70886_length_223_cov_0.851064_g62945_i0forward_frame_1 - 0.048 13.1 0.1 0.057 12.9 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein A_amylase_inhib PF01356.19 NODE_70881_length_223_cov_0.882979_g62940_i0forward_frame_1 - 0.069 13.2 1.3 0.1 12.6 1.3 1.3 1 0 0 1 1 1 0 Alpha amylase inhibitor Fer4_23 PF18009.1 NODE_70868_length_223_cov_1.053191_g62927_i0reverse_frame_1 - 0.034 14.5 0.1 0.046 14.1 0.1 1.3 1 0 0 1 1 1 0 4Fe-4S iron-sulfur cluster binding domain SNF5 PF04855.12 NODE_70866_length_223_cov_1.063830_g62925_i0reverse_frame_1 - 0.13 12.0 8.3 0.14 11.9 8.3 1.0 1 0 0 1 1 1 0 SNF5 / SMARCB1 / INI1 PIEZO PF15917.5 NODE_70866_length_223_cov_1.063830_g62925_i0reverse_frame_1 - 5.7 6.4 13.6 6.5 6.2 13.6 1.0 1 0 0 1 1 1 0 Piezo Pyridox_ox_2 PF12900.7 NODE_70864_length_223_cov_1.079787_g62923_i0reverse_frame_1 - 0.021 14.8 0.0 0.024 14.6 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase Metallothio_Pro PF02069.16 NODE_70863_length_223_cov_1.127660_g62922_i0forward_frame_1 - 0.0021 18.3 0.1 0.0037 17.5 0.1 1.4 1 0 0 1 1 1 1 Prokaryotic metallothionein Ecl1 PF12855.7 NODE_70863_length_223_cov_1.127660_g62922_i0forward_frame_1 - 0.072 14.2 0.0 0.084 14.0 0.0 1.1 1 0 0 1 1 1 0 ECL1/2/3 zinc binding proteins Sulfatase PF00884.23 NODE_70854_length_223_cov_1.202128_g62913_i0forward_frame_1 - 0.023 14.1 0.1 0.024 14.0 0.1 1.0 1 0 0 1 1 1 0 Sulfatase AA_permease_2 PF13520.6 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.13 11.0 10.0 0.12 11.1 10.0 1.0 1 0 0 1 1 1 0 Amino acid permease AmpE PF17113.5 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.15 11.4 4.7 0.16 11.3 4.7 1.1 1 0 0 1 1 1 0 Regulatory signalling modulator protein AmpE 7TMR-DISM_7TM PF07695.11 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.2 11.5 7.9 0.25 11.2 7.9 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling CBP_BcsG PF11658.8 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.43 8.9 3.3 0.39 9.1 3.3 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG DUF2207 PF09972.9 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 0.44 9.2 5.0 0.43 9.3 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Pex24p PF06398.11 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 4.9 6.0 7.6 5 6.0 7.6 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin EphA2_TM PF14575.6 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_1 - 9.6 7.2 14.4 0.42 11.5 4.0 2.1 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Comm PF15957.5 NODE_70841_length_223_cov_1.265957_g62900_i0reverse_frame_1 - 0.047 14.0 5.3 0.049 14.0 5.3 1.2 1 0 0 1 1 1 0 Commissureless FGGY_N PF00370.21 NODE_70833_length_223_cov_1.276596_g62892_i0reverse_frame_1 - 3.3e-14 53.1 0.0 3.8e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain GDC-P PF02347.16 NODE_70831_length_223_cov_1.276596_g62890_i0reverse_frame_1 - 1.8e-34 119.3 0.2 1.9e-34 119.2 0.2 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein Whib PF02467.16 NODE_70825_length_223_cov_1.372340_g62884_i0reverse_frame_1 - 0.69 10.5 2.9 0.34 11.5 0.5 1.7 1 1 1 2 2 2 0 Transcription factor WhiB DUF716 PF04819.12 NODE_70823_length_223_cov_1.382979_g62882_i0forward_frame_1 - 0.054 13.1 2.2 0.058 13.0 2.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF716) Lambda_CIII PF02061.16 NODE_70819_length_223_cov_1.409574_g62878_i0reverse_frame_1 - 0.046 13.8 0.6 4.5 7.4 0.1 2.9 1 1 2 3 3 3 0 Lambda Phage CIII DUF3102 PF11300.8 NODE_70809_length_223_cov_1.489362_g62868_i0reverse_frame_1 - 0.16 12.2 0.0 0.18 12.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3102) NAS PF03059.16 NODE_70799_length_223_cov_1.537234_g62858_i0forward_frame_1 - 0.066 12.5 0.0 0.068 12.5 0.0 1.0 1 0 0 1 1 1 0 Nicotianamine synthase protein LytTR PF04397.15 NODE_70796_length_223_cov_1.590426_g62855_i0forward_frame_1 - 0.035 14.3 0.1 0.049 13.8 0.1 1.3 1 1 0 1 1 1 0 LytTr DNA-binding domain DUF3045 PF11243.8 NODE_70789_length_223_cov_1.638298_g62848_i0forward_frame_1 - 0.28 11.4 0.5 0.36 11.0 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3045) DUF4637 PF15470.6 NODE_70789_length_223_cov_1.638298_g62848_i0forward_frame_1 - 4 7.1 7.3 4.9 6.9 7.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Msap1 PF17077.5 NODE_70788_length_223_cov_1.638298_g62847_i0reverse_frame_1 - 0.022 13.9 0.0 0.024 13.8 0.0 1.0 1 0 0 1 1 1 0 Mitotic spindle associated protein SHE1 Clc-like PF07062.12 NODE_70787_length_223_cov_1.654255_g62846_i0reverse_frame_1 - 0.11 11.9 5.2 0.12 11.8 5.2 1.1 1 0 0 1 1 1 0 Clc-like ZapD PF07072.11 NODE_70785_length_223_cov_1.675532_g62844_i0reverse_frame_1 - 0.16 11.7 1.2 0.18 11.5 1.2 1.0 1 0 0 1 1 1 0 Cell division protein COA2 PF17051.5 NODE_70784_length_223_cov_1.686170_g62843_i0reverse_frame_1 - 0.21 11.7 1.9 0.24 11.5 0.9 1.6 1 1 1 2 2 2 0 Cytochrome C oxidase assembly factor 2 NTP_transferase PF00483.23 NODE_70779_length_223_cov_1.696809_g62838_i0forward_frame_1 - 0.13 11.8 0.9 0.16 11.6 0.9 1.0 1 0 0 1 1 1 0 Nucleotidyl transferase DUF5320 PF17253.2 NODE_70779_length_223_cov_1.696809_g62838_i0forward_frame_1 - 0.41 11.7 2.1 0.36 11.9 1.0 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5320) Ly49 PF08391.10 NODE_70779_length_223_cov_1.696809_g62838_i0forward_frame_1 - 1.4 9.3 7.4 1.5 9.2 7.4 1.0 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region DUF3430 PF11912.8 NODE_70778_length_223_cov_1.696809_g62837_i0forward_frame_1 - 0.042 13.9 0.6 0.057 13.5 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3430) DUF1656 PF07869.12 NODE_70777_length_223_cov_1.696809_g62836_i0reverse_frame_1 - 0.043 13.8 4.8 0.062 13.3 4.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1656) HHH_3 PF12836.7 NODE_70774_length_223_cov_1.702128_g62833_i0reverse_frame_1 - 0.032 14.5 0.1 0.036 14.3 0.1 1.2 1 0 0 1 1 1 0 Helix-hairpin-helix motif YjhX_toxin PF09857.9 NODE_70774_length_223_cov_1.702128_g62833_i0reverse_frame_1 - 0.046 13.7 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Putative toxin of bacterial toxin-antitoxin pair IBV_3C PF03620.13 NODE_70771_length_223_cov_1.739362_g62830_i0reverse_frame_1 - 0.1 13.1 0.1 0.13 12.7 0.1 1.1 1 0 0 1 1 1 0 IBV 3C protein DAGK_acc PF00609.19 NODE_70763_length_223_cov_1.840426_g62822_i0reverse_frame_1 - 4.7e-06 27.0 0.1 5.9e-06 26.7 0.1 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain Baculo_RING PF05883.11 NODE_70756_length_223_cov_1.968085_g62815_i0forward_frame_1 - 0.13 12.3 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain UPF0515 PF15135.6 NODE_70755_length_223_cov_1.994681_g62814_i0reverse_frame_1 - 0.28 10.5 4.1 0.33 10.3 4.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 AAA_assoc PF14363.6 NODE_70753_length_223_cov_2.010638_g62812_i0reverse_frame_1 - 0.012 15.9 0.2 0.014 15.7 0.2 1.2 1 0 0 1 1 1 0 Domain associated at C-terminal with AAA DUF3316 PF11777.8 NODE_70753_length_223_cov_2.010638_g62812_i0reverse_frame_1 - 0.069 13.2 0.7 0.084 12.9 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3316) DUF5578 PF17741.1 NODE_70748_length_223_cov_2.042553_g62807_i0forward_frame_1 - 0.11 11.9 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5578) WRC PF08879.10 NODE_70748_length_223_cov_2.042553_g62807_i0forward_frame_1 - 0.19 11.5 1.0 0.24 11.1 0.1 1.7 2 0 0 2 2 2 0 WRC DUF433 PF04255.14 NODE_70747_length_223_cov_2.053191_g62806_i0forward_frame_1 - 0.15 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF433) PI31_Prot_N PF11566.8 NODE_70744_length_223_cov_2.079787_g62803_i0reverse_frame_1 - 0.13 12.0 0.1 0.15 11.9 0.1 1.1 1 0 0 1 1 1 0 PI31 proteasome regulator N-terminal ChAPs PF09295.10 NODE_70741_length_223_cov_2.127660_g62800_i0forward_frame_1 - 0.13 11.2 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) DUF4934 PF16288.5 NODE_70741_length_223_cov_2.127660_g62800_i0forward_frame_1 - 0.14 12.1 0.2 0.19 11.7 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4934) Lamprin PF06403.11 NODE_70737_length_223_cov_2.212766_g62796_i0forward_frame_1 - 0.52 10.3 5.2 0.9 9.5 5.2 1.6 1 1 0 1 1 1 0 Lamprin KSHV_K1 PF11049.8 NODE_70729_length_223_cov_2.372340_g62788_i0forward_frame_1 - 0.093 12.7 0.1 0.4 10.7 0.1 1.9 1 1 0 1 1 1 0 Glycoprotein K1 of Kaposi's sarcoma-associated herpes virus KIX_2 PF16987.5 NODE_70717_length_223_cov_2.611702_g62776_i0reverse_frame_1 - 0.0065 16.4 0.2 0.0085 16.1 0.2 1.3 1 0 0 1 1 1 1 KIX domain Abhydrolase_3 PF07859.13 NODE_70715_length_223_cov_2.648936_g62774_i0forward_frame_1 - 7.7e-06 25.9 0.0 8.1e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Vac_Fusion PF02346.16 NODE_70714_length_223_cov_2.654255_g62773_i0reverse_frame_1 - 0.0091 15.6 0.1 0.012 15.2 0.1 1.3 1 0 0 1 1 1 1 Chordopoxvirus multifunctional envelope protein A27 FBA_2 PF07735.17 NODE_70714_length_223_cov_2.654255_g62773_i0reverse_frame_1 - 0.033 14.3 0.8 0.058 13.5 0.4 1.6 1 1 0 1 1 1 0 F-box associated Acyltransferase PF01553.21 NODE_70712_length_223_cov_2.670213_g62771_i0forward_frame_1 - 9.4e-07 28.5 0.0 1.1e-06 28.4 0.0 1.0 1 0 0 1 1 1 1 Acyltransferase HU-CCDC81_euk_2 PF18289.1 NODE_70707_length_223_cov_2.877660_g62766_i0reverse_frame_1 - 0.064 13.4 0.0 0.08 13.1 0.0 1.2 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 FPL PF09758.9 NODE_70702_length_223_cov_3.191489_g62761_i0reverse_frame_1 - 0.021 14.8 1.4 0.023 14.7 1.4 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein MmoB_DmpM PF02406.17 NODE_70697_length_223_cov_3.877660_g62756_i0forward_frame_1 - 0.13 12.4 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 MmoB/DmpM family SSrecog PF03531.14 NODE_70695_length_223_cov_4.154255_g62754_i0forward_frame_1 - 0.033 14.1 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 Structure-specific recognition protein (SSRP1) DUF4589 PF15252.6 NODE_70695_length_223_cov_4.154255_g62754_i0forward_frame_1 - 0.083 12.9 0.2 0.084 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) DUF3578 PF12102.8 NODE_70675_length_223_cov_36.712766_g62734_i0reverse_frame_1 - 0.012 15.3 0.3 0.013 15.1 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3578) DUF333 PF03891.15 NODE_70673_length_223_cov_37.632979_g62732_i0reverse_frame_1 - 0.068 13.4 0.2 0.1 12.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF333) DUF2633 PF11119.8 NODE_70671_length_223_cov_42.223404_g62730_i0reverse_frame_1 - 0.02 14.8 0.1 0.032 14.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) zf-met PF12874.7 NODE_70667_length_223_cov_45.574468_g62726_i0reverse_frame_1 - 0.32 11.4 4.2 0.38 11.2 1.4 2.1 2 0 0 2 2 2 0 Zinc-finger of C2H2 type DUF4710 PF15828.5 NODE_70665_length_223_cov_49.191489_g62724_i0reverse_frame_1 - 0.77 9.9 9.0 1.2 9.3 9.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) TSGP1 PF07771.11 NODE_70665_length_223_cov_49.191489_g62724_i0reverse_frame_1 - 5.4 7.2 12.0 8.6 6.5 12.0 1.4 1 1 0 1 1 1 0 Tick salivary peptide group 1 MRAP PF15183.6 NODE_70664_length_223_cov_50.898936_g62723_i0forward_frame_1 - 0.22 11.5 0.0 0.3 11.1 0.0 1.2 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Str_synth PF03088.16 NODE_70663_length_223_cov_51.111702_g62722_i0forward_frame_1 - 0.18 11.9 0.0 0.22 11.6 0.0 1.1 1 0 0 1 1 1 0 Strictosidine synthase DUF2515 PF10720.9 NODE_70661_length_223_cov_51.765957_g62720_i0reverse_frame_1 - 0.093 11.9 0.0 0.093 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2515) RtcB PF01139.17 NODE_70655_length_223_cov_59.904255_g62714_i0forward_frame_1 - 0.013 14.7 0.0 0.013 14.7 0.0 1.0 1 0 0 1 1 1 0 tRNA-splicing ligase RtcB DUF779 PF05610.11 NODE_70655_length_223_cov_59.904255_g62714_i0forward_frame_1 - 0.097 12.9 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF779) RNase_E_G PF10150.9 NODE_70648_length_223_cov_68.021277_g62707_i0forward_frame_1 - 0.075 12.4 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Ribonuclease E/G family DUF3860 PF12976.7 NODE_70648_length_223_cov_68.021277_g62707_i0forward_frame_1 - 0.098 12.7 0.0 0.098 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3860) Stc1 PF12898.7 NODE_70644_length_223_cov_78.808511_g62703_i0reverse_frame_1 - 0.053 14.1 4.4 0.075 13.6 4.4 1.2 1 0 0 1 1 1 0 Stc1 domain DUF4590 PF15257.6 NODE_70643_length_223_cov_79.420213_g62702_i0forward_frame_1 - 0.051 13.5 1.2 0.056 13.4 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4590) Coq4 PF05019.13 NODE_70640_length_223_cov_91.313830_g62699_i0reverse_frame_1 - 0.0018 17.6 0.0 0.0023 17.3 0.0 1.0 1 0 0 1 1 1 1 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 Sulfate_transp PF00916.20 NODE_70640_length_223_cov_91.313830_g62699_i0forward_frame_1 - 0.071 11.9 0.0 0.079 11.7 0.0 1.0 1 0 0 1 1 1 0 Sulfate permease family DUF2700 PF10912.8 NODE_70636_length_223_cov_102.521277_g62695_i0forward_frame_1 - 0.05 13.6 2.5 0.053 13.6 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2700) SMC_ScpA PF02616.14 NODE_70633_length_223_cov_113.941489_g62692_i0reverse_frame_1 - 0.17 11.8 2.2 0.2 11.5 2.2 1.0 1 0 0 1 1 1 0 Segregation and condensation protein ScpA FAM176 PF14851.6 NODE_70633_length_223_cov_113.941489_g62692_i0reverse_frame_1 - 0.22 11.1 3.3 0.24 11.1 3.3 1.1 1 0 0 1 1 1 0 FAM176 family DUF4611 PF15387.6 NODE_70633_length_223_cov_113.941489_g62692_i0reverse_frame_1 - 0.58 10.4 7.2 0.83 9.9 7.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) DUF2459 PF09601.10 NODE_70628_length_223_cov_155.196809_g62687_i0reverse_frame_1 - 0.15 11.9 0.3 0.16 11.8 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2459) DUF5477 PF17571.2 NODE_70627_length_223_cov_163.617021_g62686_i0forward_frame_1 - 0.061 13.5 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5477) Miga PF10265.9 NODE_70622_length_223_cov_182.095745_g62681_i0reverse_frame_1 - 0.024 13.7 1.1 0.029 13.4 1.1 1.0 1 0 0 1 1 1 0 Mitoguardin NLRC4_HD2 PF17776.1 NODE_70622_length_223_cov_182.095745_g62681_i0forward_frame_1 - 0.13 12.8 0.1 0.13 12.8 0.1 1.1 1 0 0 1 1 1 0 NLRC4 helical domain HD2 Autophagy_C PF10381.9 NODE_70621_length_223_cov_238.569149_g62680_i0forward_frame_1 - 0.21 11.2 0.0 25 4.5 0.0 2.2 2 0 0 2 2 2 0 Autophagocytosis associated protein C-terminal DICT PF10069.9 NODE_70619_length_223_cov_371.547872_g62678_i0forward_frame_1 - 0.14 12.0 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Sensory domain in DIguanylate Cyclases and Two-component system Mt_ATP-synt_B PF05405.14 NODE_70619_length_223_cov_371.547872_g62678_i0forward_frame_1 - 0.15 11.6 1.0 0.19 11.3 1.0 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) TPR_1 PF00515.28 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 3.6e-06 26.6 1.0 0.00074 19.2 0.1 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.00039 20.3 0.7 0.029 14.5 0.1 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.0013 18.6 0.1 0.26 11.4 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat Sel1 PF08238.12 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.0066 17.1 0.2 0.14 12.8 0.0 2.4 2 0 0 2 2 2 1 Sel1 repeat TPR_8 PF13181.6 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.0098 16.0 1.0 0.25 11.7 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.01 16.1 0.2 0.032 14.5 0.1 1.8 1 1 0 1 1 1 0 Tetratricopeptide repeat ComFB PF10719.9 NODE_70615_length_224_cov_0.846561_g62674_i0reverse_frame_1 - 0.15 12.2 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Late competence development protein ComFB TPR_12 PF13424.6 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 1.2e-13 51.1 0.1 1.6e-08 34.7 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 6.2e-13 48.2 0.0 1.5e-08 34.2 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 0.0055 16.7 0.1 0.0091 16.0 0.1 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 0.062 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF1358 PF07096.11 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 0.11 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1358) TPR_7 PF13176.6 NODE_70614_length_224_cov_0.846561_g62673_i0reverse_frame_1 - 0.15 12.2 0.0 0.3 11.2 0.0 1.5 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF1736 PF08409.11 NODE_70610_length_224_cov_0.846561_g62669_i0reverse_frame_1 - 0.024 14.6 0.4 0.044 13.8 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1736) Tcf25 PF04910.14 NODE_70604_length_224_cov_0.947090_g62663_i0forward_frame_1 - 0.069 12.2 0.0 0.069 12.2 0.0 1.0 1 0 0 1 1 1 0 Transcriptional repressor TCF25 Tox-SGS PF15651.6 NODE_70590_length_224_cov_1.058201_g62649_i0reverse_frame_1 - 0.013 15.7 0.3 0.015 15.5 0.3 1.0 1 0 0 1 1 1 0 Salivary glad secreted protein domain toxin DUF547 PF04784.14 NODE_70579_length_224_cov_1.179894_g62638_i0forward_frame_1 - 0.062 13.3 0.1 0.067 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF547 Nbl1_Borealin_N PF10444.9 NODE_70577_length_224_cov_1.222222_g62636_i0forward_frame_1 - 0.054 13.1 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Nucleoplasmin PF03066.15 NODE_70571_length_224_cov_1.259259_g62630_i0reverse_frame_1 - 0.014 15.8 0.3 0.017 15.6 0.3 1.2 1 0 0 1 1 1 0 Nucleoplasmin/nucleophosmin domain UPF0561 PF10573.9 NODE_70571_length_224_cov_1.259259_g62630_i0reverse_frame_1 - 0.035 14.2 1.5 0.82 9.8 1.5 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0561 Lipase_chap PF03280.14 NODE_70571_length_224_cov_1.259259_g62630_i0reverse_frame_1 - 0.68 9.9 13.9 0.75 9.7 13.9 1.1 1 0 0 1 1 1 0 Proteobacterial lipase chaperone protein TPR_10 PF13374.6 NODE_70570_length_224_cov_1.259259_g62629_i0reverse_frame_1 - 4.6e-19 67.7 0.0 8.4e-10 38.2 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_70570_length_224_cov_1.259259_g62629_i0reverse_frame_1 - 3.2e-16 59.4 0.8 1.4e-10 41.3 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat NuDC PF16273.5 NODE_70570_length_224_cov_1.259259_g62629_i0reverse_frame_1 - 0.033 14.7 0.7 3.2 8.3 0.1 2.1 2 0 0 2 2 2 0 Nuclear distribution C domain FixQ PF05545.11 NODE_70566_length_224_cov_1.264550_g62625_i0reverse_frame_1 - 1.3 9.1 6.4 2.1 8.4 6.4 1.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DDT PF02791.17 NODE_70565_length_224_cov_1.264550_g62624_i0reverse_frame_1 - 0.031 14.6 0.2 0.055 13.8 0.2 1.5 1 0 0 1 1 1 0 DDT domain Acyl-CoA_dh_C PF12806.7 NODE_70565_length_224_cov_1.264550_g62624_i0reverse_frame_1 - 0.11 12.6 0.1 0.14 12.3 0.1 1.1 1 0 0 1 1 1 0 Acetyl-CoA dehydrogenase C-terminal like Ribosomal_S8e PF01201.22 NODE_70563_length_224_cov_1.269841_g62622_i0forward_frame_1 - 0.12 12.5 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein S8e DUF3898 PF13037.6 NODE_70562_length_224_cov_1.269841_g62621_i0forward_frame_1 - 0.045 13.9 0.0 0.063 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3898) DivIC PF04977.15 NODE_70555_length_224_cov_1.280423_g62614_i0forward_frame_1 - 1.4 8.7 7.2 0.5 10.2 3.6 1.8 1 1 1 2 2 2 0 Septum formation initiator DUF2418 PF10332.9 NODE_70554_length_224_cov_1.296296_g62613_i0forward_frame_1 - 0.55 10.8 4.1 0.61 10.7 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) CLIP PF12032.8 NODE_70543_length_224_cov_1.407407_g62602_i0reverse_frame_1 - 0.037 14.3 0.0 0.055 13.7 0.0 1.3 1 0 0 1 1 1 0 Regulatory CLIP domain of proteinases zf_CCCH_5 PF18384.1 NODE_70539_length_224_cov_1.444444_g62598_i0forward_frame_1 - 0.026 14.7 1.0 0.026 14.7 1.0 2.1 2 0 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) Chlam_PMP PF02415.17 NODE_70525_length_224_cov_1.587302_g62584_i0reverse_frame_1 - 0.44 11.1 10.0 14 6.5 1.4 3.3 3 0 0 3 3 3 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat DUF3913 PF13052.6 NODE_70521_length_224_cov_1.608466_g62580_i0forward_frame_1 - 0.15 12.3 0.0 0.2 12.0 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3913) zf-C2H2_4 PF13894.6 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_1 - 0.0018 18.9 5.1 0.069 14.0 0.3 2.5 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_1 - 0.0035 17.7 0.2 0.0035 17.7 0.2 2.5 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_1 - 0.0045 17.3 0.1 0.0045 17.3 0.1 2.3 2 1 0 2 2 2 1 Zinc-finger double domain zf-C2H2_8 PF15909.5 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_1 - 0.012 15.9 0.2 0.013 15.8 0.2 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon zf-AN1 PF01428.16 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_1 - 1.1 9.4 5.5 8.1 6.7 3.6 2.3 1 1 1 2 2 2 0 AN1-like Zinc finger Chlam_OMP6 PF03504.13 NODE_70510_length_224_cov_1.687831_g62569_i0forward_frame_1 - 0.11 12.8 0.1 0.12 12.7 0.1 1.2 1 1 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 6 TetR_C_7 PF14246.6 NODE_70508_length_224_cov_1.724868_g62567_i0reverse_frame_1 - 0.085 12.9 0.1 0.088 12.8 0.1 1.1 1 0 0 1 1 1 0 AefR-like transcriptional repressor, C-terminal domain DUF1158 PF06643.11 NODE_70504_length_224_cov_1.783069_g62563_i0forward_frame_1 - 0.068 13.7 0.2 0.081 13.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1158) HisKA PF00512.25 NODE_70500_length_224_cov_1.825397_g62559_i0reverse_frame_1 - 0.0045 17.0 1.7 0.03 14.4 1.7 1.9 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain DUF3915 PF13054.6 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_1 - 0.00028 20.9 8.3 0.00035 20.5 8.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_1 - 0.34 9.2 5.3 0.33 9.2 5.3 1.1 1 0 0 1 1 1 0 Atrophin-1 family Laminin_EGF PF00053.24 NODE_70495_length_224_cov_1.920635_g62554_i0reverse_frame_1 - 0.11 12.7 3.5 0.15 12.2 3.5 1.5 1 1 0 1 1 1 0 Laminin EGF domain TPR_2 PF07719.17 NODE_70493_length_224_cov_1.941799_g62552_i0reverse_frame_1 - 0.032 14.3 0.0 0.059 13.5 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_70493_length_224_cov_1.941799_g62552_i0reverse_frame_1 - 0.11 12.3 0.1 0.2 11.5 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DNA_methylase PF00145.17 NODE_70492_length_224_cov_1.947090_g62551_i0forward_frame_1 - 0.15 11.4 0.0 0.18 11.1 0.0 1.0 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Connexin PF00029.19 NODE_70487_length_224_cov_2.015873_g62546_i0reverse_frame_1 - 0.018 14.8 0.0 0.019 14.8 0.0 1.0 1 0 0 1 1 1 0 Connexin zf-CCCH_6 PF18585.1 NODE_70487_length_224_cov_2.015873_g62546_i0reverse_frame_1 - 0.025 14.4 0.0 0.034 14.0 0.0 1.2 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 Cytochrom_B558a PF05038.13 NODE_70479_length_224_cov_2.195767_g62538_i0reverse_frame_1 - 0.029 14.0 0.3 0.03 13.9 0.3 1.1 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit Proton_antipo_N PF00662.20 NODE_70479_length_224_cov_2.195767_g62538_i0forward_frame_1 - 0.13 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E_raikovi_mat PF06360.11 NODE_70476_length_224_cov_2.248677_g62535_i0reverse_frame_1 - 0.071 13.5 0.6 0.071 13.5 0.6 1.9 2 0 0 2 2 2 0 Euplotes raikovi mating pheromone RNA12 PF10443.9 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 0.25 10.0 6.8 0.27 9.9 6.8 1.0 1 0 0 1 1 1 0 RNA12 protein TMPIT PF07851.13 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 3.2 6.9 9.8 3.2 6.9 9.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein DDRGK PF09756.9 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 4.5 6.8 21.5 4.9 6.7 21.5 1.0 1 0 0 1 1 1 0 DDRGK domain DUF2203 PF09969.9 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 5.3 7.8 11.5 6.6 7.5 11.5 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF724 PF05266.14 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 5.4 6.8 14.7 5.9 6.7 14.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) CIAPIN1 PF05093.13 NODE_70475_length_224_cov_2.264550_g62534_i0reverse_frame_1 - 8.1 7.0 8.7 9.5 6.8 8.7 1.1 1 0 0 1 1 1 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis Lamprin PF06403.11 NODE_70471_length_224_cov_2.317460_g62530_i0forward_frame_1 - 0.57 10.1 7.2 0.7 9.9 7.2 1.2 1 0 0 1 1 1 0 Lamprin Bradykinin PF06753.12 NODE_70470_length_224_cov_2.322751_g62529_i0reverse_frame_1 - 0.015 14.9 0.1 0.028 14.1 0.1 1.4 1 0 0 1 1 1 0 Bradykinin Chromo_2 PF18704.1 NODE_70469_length_224_cov_2.322751_g62528_i0reverse_frame_1 - 0.05 13.9 0.3 0.078 13.2 0.3 1.3 1 0 0 1 1 1 0 Chromatin organization modifier domain 2 DUF1327 PF07041.11 NODE_70468_length_224_cov_2.328042_g62527_i0forward_frame_1 - 8e-28 96.7 0.0 9e-28 96.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1327) DUF874 PF05917.11 NODE_70465_length_224_cov_2.375661_g62524_i0reverse_frame_1 - 0.15 11.0 0.0 0.17 10.9 0.0 1.0 1 0 0 1 1 1 0 Helicobacter pylori protein of unknown function (DUF874) DUF3449 PF11931.8 NODE_70460_length_224_cov_2.465608_g62519_i0reverse_frame_1 - 0.044 13.6 0.0 0.048 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) MFS_1 PF07690.16 NODE_70459_length_224_cov_2.534392_g62518_i0reverse_frame_1 - 4.7e-08 32.3 2.6 5.1e-08 32.2 2.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1 PF07690.16 NODE_70447_length_224_cov_2.825397_g62506_i0forward_frame_1 - 8.2e-06 25.0 0.1 9e-06 24.8 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ATG22 PF11700.8 NODE_70447_length_224_cov_2.825397_g62506_i0forward_frame_1 - 0.055 12.1 0.2 0.06 12.0 0.2 1.0 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like Tox-MPTase2 PF15638.6 NODE_70446_length_224_cov_2.830688_g62505_i0reverse_frame_1 - 0.19 11.5 0.0 0.21 11.3 0.0 1.0 1 0 0 1 1 1 0 Metallopeptidase toxin 2 DUF3915 PF13054.6 NODE_70445_length_224_cov_2.830688_g62504_i0reverse_frame_1 - 4.7 7.2 34.7 3.6 7.6 16.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3915) ORC5_C PF14630.6 NODE_70445_length_224_cov_2.830688_g62504_i0reverse_frame_1 - 7.2 6.0 9.6 10 5.6 9.2 1.4 1 1 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus SLC3A2_N PF16028.5 NODE_70444_length_224_cov_2.888889_g62503_i0reverse_frame_1 - 0.05 13.1 0.2 0.078 12.5 0.1 1.3 1 1 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus BPD_transp_1 PF00528.22 NODE_70442_length_224_cov_2.989418_g62501_i0reverse_frame_1 - 1.5e-09 37.9 4.2 1.6e-09 37.8 4.2 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 4.5e-08 33.7 0.1 6.6e-08 33.2 0.1 1.3 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.00083 19.1 0.0 0.0011 18.7 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.0014 18.6 0.1 0.0023 17.9 0.1 1.4 1 1 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.0098 16.3 0.0 0.015 15.7 0.0 1.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_25 PF13481.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.015 14.9 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.018 15.0 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain NB-ARC PF00931.22 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.026 13.7 0.0 0.031 13.5 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_22 PF13401.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.055 13.7 0.2 0.082 13.2 0.2 1.3 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.067 13.7 0.0 0.08 13.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 NODE_70434_length_224_cov_3.354497_g62493_i0forward_frame_1 - 0.13 12.0 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF3403 PF11883.8 NODE_70433_length_224_cov_3.460317_g62492_i0reverse_frame_1 - 0.044 13.9 0.0 0.066 13.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3403) DUF166 PF02593.14 NODE_70405_length_224_cov_43.248677_g62464_i0forward_frame_1 - 0.095 12.2 0.0 0.098 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function Atx10homo_assoc PF09759.9 NODE_70401_length_224_cov_46.513228_g62460_i0forward_frame_1 - 0.2 11.7 0.0 0.26 11.3 0.0 1.1 1 0 0 1 1 1 0 Spinocerebellar ataxia type 10 protein domain UCH PF00443.29 NODE_70394_length_224_cov_53.756614_g62453_i0reverse_frame_1 - 0.0017 17.9 0.3 0.0018 17.8 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 NODE_70382_length_224_cov_67.174603_g62441_i0reverse_frame_1 - 0.62 10.4 6.6 2.5 8.5 6.6 1.9 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein TMEM18 PF14770.6 NODE_70381_length_224_cov_67.433862_g62440_i0forward_frame_1 - 0.01 15.9 0.6 0.01 15.9 0.6 1.1 1 0 0 1 1 1 1 Transmembrane protein 18 CCDC106 PF15794.5 NODE_70380_length_224_cov_68.333333_g62439_i0reverse_frame_1 - 1.4 8.6 9.9 1.5 8.5 9.9 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Zip PF02535.22 NODE_70380_length_224_cov_68.333333_g62439_i0reverse_frame_1 - 1.6 7.9 4.0 1.6 7.9 4.0 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter CobT PF06213.12 NODE_70380_length_224_cov_68.333333_g62439_i0reverse_frame_1 - 2.3 7.5 8.7 2.5 7.4 8.7 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Presenilin PF01080.17 NODE_70380_length_224_cov_68.333333_g62439_i0reverse_frame_1 - 2.8 6.6 5.8 2.7 6.7 5.8 1.0 1 0 0 1 1 1 0 Presenilin tRNA_lig_CPD PF08302.11 NODE_70379_length_224_cov_73.238095_g62438_i0forward_frame_1 - 8.2e-07 28.7 0.0 8.8e-07 28.6 0.0 1.0 1 0 0 1 1 1 1 Fungal tRNA ligase phosphodiesterase domain Myticin-prepro PF10690.9 NODE_70377_length_224_cov_76.894180_g62436_i0reverse_frame_1 - 4.4 7.6 7.5 0.81 10.0 0.8 1.9 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel DUF5522 PF17653.1 NODE_70370_length_224_cov_101.888889_g62429_i0forward_frame_1 - 0.077 13.0 1.8 0.077 13.0 1.8 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5522) PocR PF10114.9 NODE_70368_length_224_cov_108.153439_g62427_i0reverse_frame_1 - 0.041 13.7 1.0 0.047 13.5 1.0 1.0 1 0 0 1 1 1 0 Sensory domain found in PocR Albumin_I PF08027.11 NODE_70361_length_224_cov_167.280423_g62420_i0reverse_frame_1 - 0.045 13.4 0.1 8.6 6.1 0.0 2.3 2 0 0 2 2 2 0 Albumin I chain b ETRAMP PF09716.10 NODE_70360_length_224_cov_171.317460_g62419_i0reverse_frame_1 - 0.16 12.1 0.5 0.15 12.1 0.5 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Ferlin_C PF16165.5 NODE_70356_length_224_cov_214.851852_g62415_i0reverse_frame_1 - 0.025 14.5 0.7 0.029 14.3 0.7 1.1 1 0 0 1 1 1 0 Ferlin C-terminus RAMP4 PF06624.12 NODE_70355_length_224_cov_215.597884_g62414_i0forward_frame_1 - 1.4 9.1 5.6 2.2 8.4 5.6 1.3 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Dimer_Tnp_hAT PF05699.14 NODE_70345_length_224_cov_532.137566_g62404_i0reverse_frame_1 - 0.16 11.8 0.4 0.24 11.2 0.2 1.4 1 1 0 1 1 1 0 hAT family C-terminal dimerisation region Ank_4 PF13637.6 NODE_70345_length_224_cov_532.137566_g62404_i0forward_frame_1 - 0.00021 21.8 0.3 0.15 12.7 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_70345_length_224_cov_532.137566_g62404_i0forward_frame_1 - 0.00024 21.6 0.1 0.00038 21.0 0.1 1.3 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_70345_length_224_cov_532.137566_g62404_i0forward_frame_1 - 0.00052 20.2 0.5 0.063 13.9 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat HyaE PF07449.11 NODE_70337_length_225_cov_0.842105_g62396_i0forward_frame_1 - 0.039 13.9 0.0 0.045 13.7 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks357.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks357.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks357.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks357.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- HnRNP_M PF11532.8 NODE_70327_length_225_cov_0.921053_g62386_i0reverse_frame_1 - 3.2 8.1 10.1 0.3 11.3 4.2 2.1 2 1 0 2 2 2 0 Heterogeneous nuclear ribonucleoprotein M Guanylate_cyc PF00211.20 NODE_70321_length_225_cov_1.005263_g62380_i0forward_frame_1 - 8.5e-08 32.0 0.0 9e-08 32.0 0.0 1.0 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Defb50 PF17546.2 NODE_70318_length_225_cov_1.047368_g62377_i0reverse_frame_1 - 0.0025 17.7 1.7 0.21 11.5 0.1 2.3 2 0 0 2 2 2 2 Beta defensin 50 RWP-RK PF02042.15 NODE_70318_length_225_cov_1.047368_g62377_i0forward_frame_1 - 0.091 12.8 0.3 12 6.0 0.2 2.2 2 0 0 2 2 2 0 RWP-RK domain DUF5570 PF17731.1 NODE_70315_length_225_cov_1.052632_g62374_i0reverse_frame_1 - 0.037 14.1 0.2 0.043 13.9 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5570) Sgf11 PF08209.11 NODE_70307_length_225_cov_1.121053_g62366_i0reverse_frame_1 - 0.014 14.9 0.1 0.026 14.1 0.1 1.4 1 0 0 1 1 1 0 Sgf11 (transcriptional regulation protein) PTN_MK_C PF01091.18 NODE_70289_length_225_cov_1.263158_g62348_i0forward_frame_1 - 0.044 14.2 0.9 0.06 13.7 0.9 1.2 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, C-terminal domain Tmp39 PF10271.9 NODE_70283_length_225_cov_1.263158_g62342_i0forward_frame_1 - 0.03 13.3 2.0 0.035 13.1 2.0 1.0 1 0 0 1 1 1 0 Putative transmembrane protein DUF3593 PF12159.8 NODE_70279_length_225_cov_1.294737_g62338_i0forward_frame_1 - 0.33 11.0 3.8 0.42 10.7 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3593) Viral_coat PF00729.18 NODE_70278_length_225_cov_1.315789_g62337_i0forward_frame_1 - 0.08 12.8 0.0 0.097 12.5 0.0 1.1 1 0 0 1 1 1 0 Viral coat protein (S domain) Avl9 PF09794.9 NODE_70275_length_225_cov_1.336842_g62334_i0reverse_frame_1 - 2.1e-08 33.3 0.0 2.2e-08 33.2 0.0 1.0 1 0 0 1 1 1 1 Transport protein Avl9 SPA PF08616.10 NODE_70275_length_225_cov_1.336842_g62334_i0reverse_frame_1 - 0.00019 21.4 0.0 0.00022 21.2 0.0 1.1 1 0 0 1 1 1 1 Stabilization of polarity axis IRK PF01007.20 NODE_70273_length_225_cov_1.363158_g62332_i0reverse_frame_1 - 0.035 13.9 1.6 0.04 13.7 1.6 1.0 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain RNA_pol_Rpb2_5 PF04567.17 NODE_70272_length_225_cov_1.363158_g62331_i0reverse_frame_1 - 1.4e-11 44.7 0.0 1.4e-11 44.7 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 CALM_bind PF16025.5 NODE_70270_length_225_cov_1.368421_g62329_i0reverse_frame_1 - 0.061 13.8 0.2 0.086 13.3 0.2 1.2 1 0 0 1 1 1 0 Calcium-dependent calmodulin binding Receptor_2B4 PF11465.8 NODE_70266_length_225_cov_1.378947_g62325_i0forward_frame_1 - 0.0021 18.2 2.5 0.0024 18.0 2.5 1.1 1 0 0 1 1 1 1 Natural killer cell receptor 2B4 DUF1241 PF06840.11 NODE_70262_length_225_cov_1.400000_g62321_i0reverse_frame_1 - 0.0007 19.3 0.0 0.00079 19.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1241) Ank_2 PF12796.7 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 1.1e-11 45.2 0.2 1e-10 42.0 0.2 2.0 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 1.1e-10 41.9 0.5 7.7e-07 29.6 0.1 2.9 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 2.9e-09 36.4 0.8 0.004 17.5 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 2.2e-08 34.1 0.1 0.023 15.1 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 1.3e-05 25.3 0.1 0.00057 20.1 0.0 2.6 1 1 2 3 3 3 2 Ankyrin repeats (many copies) DUF3447 PF11929.8 NODE_70245_length_225_cov_1.505263_g62304_i0reverse_frame_1 - 0.024 14.6 1.2 0.036 14.0 1.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3447) NinF PF05810.12 NODE_70241_length_225_cov_1.547368_g62300_i0forward_frame_1 - 0.052 13.4 0.3 0.62 10.0 0.0 2.1 2 0 0 2 2 2 0 NinF protein DUF5423 PF17461.2 NODE_70238_length_225_cov_1.573684_g62297_i0reverse_frame_1 - 0.051 12.4 0.0 0.058 12.2 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5423) EamA PF00892.20 NODE_70237_length_225_cov_1.578947_g62296_i0forward_frame_1 - 0.0051 17.0 3.4 0.0058 16.8 3.4 1.2 1 0 0 1 1 1 1 EamA-like transporter family ABC2_membrane_5 PF13346.6 NODE_70237_length_225_cov_1.578947_g62296_i0forward_frame_1 - 0.038 13.6 6.1 0.04 13.5 6.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF417 PF04224.12 NODE_70237_length_225_cov_1.578947_g62296_i0forward_frame_1 - 0.26 10.8 3.7 1.9 8.0 3.7 1.9 1 1 0 1 1 1 0 Protein of unknown function, DUF417 TPM_phosphatase PF04536.14 NODE_70234_length_225_cov_1.589474_g62293_i0forward_frame_1 - 0.07 13.3 0.0 0.076 13.2 0.0 1.1 1 0 0 1 1 1 0 TPM domain DXP_synthase_N PF13292.6 NODE_70233_length_225_cov_1.594737_g62292_i0forward_frame_1 - 1.9e-32 112.6 0.4 2e-32 112.5 0.4 1.0 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 NODE_70233_length_225_cov_1.594737_g62292_i0forward_frame_1 - 0.00016 20.7 0.1 0.00016 20.7 0.1 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 NODE_70233_length_225_cov_1.594737_g62292_i0forward_frame_1 - 0.00092 19.0 0.3 0.001 18.9 0.3 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SpoVS PF04232.12 NODE_70233_length_225_cov_1.594737_g62292_i0forward_frame_1 - 0.058 13.1 0.4 0.074 12.8 0.4 1.1 1 0 0 1 1 1 0 Stage V sporulation protein S (SpoVS) SecY PF00344.20 NODE_70231_length_225_cov_1.605263_g62290_i0reverse_frame_1 - 0.23 10.7 5.1 0.24 10.6 5.1 1.1 1 0 0 1 1 1 0 SecY translocase Tad PF13400.6 NODE_70231_length_225_cov_1.605263_g62290_i0reverse_frame_1 - 2.2 8.7 5.3 3.5 8.0 5.3 1.3 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like Baculo_11_kDa PF06143.11 NODE_70231_length_225_cov_1.605263_g62290_i0reverse_frame_1 - 8.8 6.0 12.0 12 5.5 12.0 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family TetR_C_3 PF08362.11 NODE_70226_length_225_cov_1.626316_g62285_i0forward_frame_1 - 8.5e-22 77.6 0.0 9.3e-22 77.5 0.0 1.0 1 0 0 1 1 1 1 YcdC-like protein, C-terminal region Tfb2_C PF18307.1 NODE_70221_length_225_cov_1.652632_g62280_i0reverse_frame_1 - 0.047 14.1 0.4 0.047 14.1 0.4 1.4 2 0 0 2 2 2 0 Transcription factor Tfb2 (p52) C-terminal domain PDR_CDR PF06422.12 NODE_70220_length_225_cov_1.652632_g62279_i0reverse_frame_1 - 0.1 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 CDR ABC transporter DUF4713 PF15831.5 NODE_70220_length_225_cov_1.652632_g62279_i0reverse_frame_1 - 1.1 9.7 11.1 15 6.1 11.8 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4713) Androgen_recep PF02166.16 NODE_70220_length_225_cov_1.652632_g62279_i0forward_frame_1 - 0.31 9.9 1.2 0.35 9.7 1.2 1.0 1 0 0 1 1 1 0 Androgen receptor Aromatic_hydrox PF11723.8 NODE_70218_length_225_cov_1.663158_g62277_i0reverse_frame_1 - 0.17 11.3 0.1 0.19 11.2 0.1 1.0 1 0 0 1 1 1 0 Homotrimeric ring hydroxylase zf-RING_UBOX PF13445.6 NODE_70217_length_225_cov_1.668421_g62276_i0forward_frame_1 - 1.9 8.6 7.0 15 5.7 6.9 2.1 1 1 0 1 1 1 0 RING-type zinc-finger ATP-synt_8 PF00895.20 NODE_70213_length_225_cov_1.684211_g62272_i0reverse_frame_1 - 2.9 8.4 7.5 0.4 11.2 3.1 1.8 1 1 1 2 2 2 0 ATP synthase protein 8 OTU PF02338.19 NODE_70211_length_225_cov_1.705263_g62270_i0reverse_frame_1 - 1.5e-07 32.0 0.0 1.9e-07 31.6 0.0 1.1 1 0 0 1 1 1 1 OTU-like cysteine protease Tagatose_6_P_K PF08013.11 NODE_70208_length_225_cov_1.736842_g62267_i0forward_frame_1 - 2.7e-27 95.5 0.0 2.9e-27 95.4 0.0 1.0 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase DUF1509 PF07420.11 NODE_70202_length_225_cov_1.826316_g62261_i0forward_frame_1 - 0.085 11.8 0.5 0.087 11.8 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Ephrin_rec_like PF07699.13 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 5.1e-06 26.2 25.1 7.6e-05 22.4 16.6 2.8 2 2 0 2 2 2 2 Putative ephrin-receptor like TNFR_c6 PF00020.18 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 0.00097 19.5 15.0 0.0033 17.8 6.2 3.3 2 1 1 3 3 3 2 TNFR/NGFR cysteine-rich region CBM_14 PF01607.24 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 0.24 11.6 10.0 2.6 8.3 0.5 3.1 1 1 1 2 2 2 0 Chitin binding Peritrophin-A domain Dickkopf_N PF04706.12 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 0.76 10.3 9.8 2.3 8.8 1.9 3.2 1 1 2 3 3 3 0 Dickkopf N-terminal cysteine-rich region Opy2 PF09463.10 NODE_70201_length_225_cov_1.836842_g62260_i0forward_frame_1 - 1.4 9.3 18.3 36 4.8 15.5 3.3 1 1 1 2 2 2 0 Opy2 protein DUF1955 PF09205.10 NODE_70196_length_225_cov_1.889474_g62255_i0reverse_frame_1 - 0.058 13.1 0.8 0.058 13.1 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) Cytochrome-c551 PF10643.9 NODE_70196_length_225_cov_1.889474_g62255_i0reverse_frame_1 - 0.65 9.5 5.2 0.72 9.4 5.2 1.0 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 CAP PF00188.26 NODE_70194_length_225_cov_1.905263_g62253_i0reverse_frame_1 - 6.1e-05 23.9 0.0 7.2e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Cysteine-rich secretory protein family TFIIE_beta PF02186.15 NODE_70194_length_225_cov_1.905263_g62253_i0reverse_frame_1 - 0.1 12.9 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 TFIIE beta subunit core domain B1 PF02246.15 NODE_70194_length_225_cov_1.905263_g62253_i0reverse_frame_1 - 0.12 12.5 0.1 0.22 11.6 0.1 1.4 1 1 0 1 1 1 0 Protein L b1 domain Aph-1 PF06105.12 NODE_70193_length_225_cov_1.910526_g62252_i0forward_frame_1 - 0.063 12.7 0.1 0.069 12.5 0.1 1.0 1 0 0 1 1 1 0 Aph-1 protein E1-E2_ATPase PF00122.20 NODE_70175_length_225_cov_2.242105_g62234_i0forward_frame_1 - 0.12 11.9 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 E1-E2 ATPase Papilloma_E5A PF05776.12 NODE_70173_length_225_cov_2.247368_g62232_i0reverse_frame_1 - 0.23 11.9 3.1 0.16 12.4 1.5 1.5 2 0 0 2 2 2 0 Papillomavirus E5A protein DUF4738 PF15889.5 NODE_70172_length_225_cov_2.247368_g62231_i0forward_frame_1 - 0.0099 15.7 0.1 0.012 15.5 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4738) Takusan PF04822.13 NODE_70169_length_225_cov_2.294737_g62228_i0forward_frame_1 - 0.014 15.2 6.0 0.11 12.3 0.4 2.2 2 0 0 2 2 2 0 Takusan Put_Phosphatase PF06888.12 NODE_70169_length_225_cov_2.294737_g62228_i0forward_frame_1 - 0.032 13.6 0.0 0.034 13.6 0.0 1.1 1 0 0 1 1 1 0 Putative Phosphatase DUF4140 PF13600.6 NODE_70169_length_225_cov_2.294737_g62228_i0forward_frame_1 - 1.4 9.4 4.1 6.6 7.2 1.1 2.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DBC1 PF14443.6 NODE_70168_length_225_cov_2.310526_g62227_i0reverse_frame_1 - 0.13 12.2 0.2 0.18 11.8 0.2 1.1 1 0 0 1 1 1 0 DBC1 DUF1479 PF07350.12 NODE_70162_length_225_cov_2.373684_g62221_i0forward_frame_1 - 0.13 11.0 0.0 0.14 10.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) PhnA_Zn_Ribbon PF08274.12 NODE_70153_length_225_cov_2.610526_g62212_i0reverse_frame_1 - 0.0077 16.2 1.5 0.0077 16.2 1.5 2.4 4 0 0 4 4 4 1 PhnA Zinc-Ribbon IBR PF01485.21 NODE_70153_length_225_cov_2.610526_g62212_i0reverse_frame_1 - 0.011 16.0 7.6 0.015 15.5 7.6 1.3 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain DMAP1_like PF17024.5 NODE_70152_length_225_cov_2.647368_g62211_i0reverse_frame_1 - 0.0033 17.5 1.2 0.0041 17.2 1.2 1.2 1 0 0 1 1 1 1 Putative DMAP1-like Abhydro_lipase PF04083.16 NODE_70147_length_225_cov_2.694737_g62206_i0forward_frame_1 - 0.019 14.5 0.0 0.025 14.2 0.0 1.2 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region DUF705 PF05152.12 NODE_70146_length_225_cov_2.742105_g62205_i0forward_frame_1 - 0.15 11.5 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF705) OST3_OST6 PF04756.13 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_1 - 0.023 14.0 0.0 0.028 13.8 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family WASH-7_C PF14746.6 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_1 - 0.03 14.0 2.0 0.035 13.8 2.0 1.0 1 0 0 1 1 1 0 WASH complex subunit 7, C-terminal 7TM_GPCR_Srab PF10292.9 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_1 - 0.12 11.3 6.6 0.14 11.1 6.6 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor Peptidase_S41 PF03572.18 NODE_70140_length_225_cov_3.021053_g62199_i0reverse_frame_1 - 4.5e-16 58.9 0.0 5e-16 58.7 0.0 1.0 1 0 0 1 1 1 1 Peptidase family S41 NLBH PF05211.12 NODE_70140_length_225_cov_3.021053_g62199_i0reverse_frame_1 - 0.12 11.9 0.1 0.13 11.8 0.1 1.0 1 0 0 1 1 1 0 Neuraminyllactose-binding hemagglutinin precursor (NLBH) Atrophin-1 PF03154.15 NODE_70139_length_225_cov_3.068421_g62198_i0reverse_frame_1 - 0.066 11.5 3.2 0.057 11.7 3.2 1.1 1 0 0 1 1 1 0 Atrophin-1 family NTP_transferase PF00483.23 NODE_70138_length_225_cov_3.073684_g62197_i0forward_frame_1 - 0.0011 18.6 0.0 0.0011 18.6 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase RNase_PH_C PF03725.15 NODE_70133_length_225_cov_3.252632_g62192_i0reverse_frame_1 - 0.035 14.1 0.0 0.045 13.8 0.0 1.2 1 0 0 1 1 1 0 3' exoribonuclease family, domain 2 Asp_protease_2 PF13650.6 NODE_70133_length_225_cov_3.252632_g62192_i0reverse_frame_1 - 0.056 14.1 0.0 0.07 13.8 0.0 1.2 1 0 0 1 1 1 0 Aspartyl protease gag-asp_proteas PF13975.6 NODE_70133_length_225_cov_3.252632_g62192_i0reverse_frame_1 - 0.15 12.6 0.0 0.19 12.3 0.0 1.2 1 0 0 1 1 1 0 gag-polyprotein putative aspartyl protease DUF2663 PF10864.8 NODE_70125_length_225_cov_3.978947_g62184_i0reverse_frame_1 - 0.06 13.8 1.2 0.063 13.7 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Phage_Gp23 PF10669.9 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_1 - 0.28 11.5 6.2 0.33 11.3 6.2 1.3 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) DUF3915 PF13054.6 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_1 - 4.5 7.3 8.1 5.2 7.1 7.4 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3915) MAP65_ASE1 PF03999.12 NODE_70122_length_225_cov_5.457895_g62181_i0forward_frame_1 - 0.17 10.5 0.2 0.15 10.7 0.2 1.0 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) ABC2_membrane_3 PF12698.7 NODE_70119_length_225_cov_19.947368_g62178_i0reverse_frame_1 - 0.48 9.5 19.7 0.54 9.3 19.7 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein LisH PF08513.11 NODE_70116_length_225_cov_23.784211_g62175_i0reverse_frame_1 - 0.0072 16.2 0.3 0.0099 15.8 0.3 1.3 1 0 0 1 1 1 1 LisH FOP_dimer PF09398.10 NODE_70116_length_225_cov_23.784211_g62175_i0reverse_frame_1 - 0.097 12.9 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain FANCI_S1 PF14675.6 NODE_70114_length_225_cov_29.452632_g62173_i0reverse_frame_1 - 0.031 13.8 0.6 0.04 13.5 0.6 1.2 1 0 0 1 1 1 0 FANCI solenoid 1 Myco_arth_vir_N PF09610.10 NODE_70112_length_225_cov_32.894737_g62171_i0forward_frame_1 - 5.1 7.3 12.5 4.5 7.4 5.6 2.4 2 0 0 2 2 2 0 Mycoplasma virulence signal region (Myco_arth_vir_N) Peptidase_C31 PF05410.13 NODE_70098_length_225_cov_52.226316_g62157_i0forward_frame_1 - 0.11 12.5 0.1 0.39 10.8 0.1 1.8 1 1 0 1 1 1 0 Porcine arterivirus-type cysteine proteinase alpha DUF1065 PF06358.11 NODE_70097_length_225_cov_55.031579_g62156_i0reverse_frame_1 - 0.14 12.1 0.1 0.17 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1065) AbLIM_anchor PF16182.5 NODE_70092_length_225_cov_58.300000_g62151_i0reverse_frame_1 - 0.02 14.8 0.5 0.022 14.6 0.5 1.1 1 0 0 1 1 1 0 Putative adherens-junction anchoring region of AbLIM zf-UBR PF02207.20 NODE_70084_length_225_cov_69.415789_g62143_i0forward_frame_1 - 4.8e-06 26.6 1.7 6.7e-06 26.2 1.7 1.3 1 0 0 1 1 1 1 Putative zinc finger in N-recognin (UBR box) Tnp_zf-ribbon_2 PF13842.6 NODE_70084_length_225_cov_69.415789_g62143_i0forward_frame_1 - 0.0043 17.8 0.3 0.0092 16.8 0.3 1.6 1 1 0 1 1 1 1 DDE_Tnp_1-like zinc-ribbon zf-B_box PF00643.24 NODE_70084_length_225_cov_69.415789_g62143_i0forward_frame_1 - 0.076 13.2 6.2 0.24 11.6 1.4 2.2 2 0 0 2 2 2 0 B-box zinc finger ETRAMP PF09716.10 NODE_70082_length_225_cov_71.878947_g62141_i0forward_frame_1 - 3.9 7.6 4.1 6.4 6.9 4.1 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) RE_Eco47II PF09553.10 NODE_70079_length_225_cov_81.505263_g62138_i0forward_frame_1 - 0.11 12.0 0.1 0.13 11.8 0.1 1.1 1 0 0 1 1 1 0 Eco47II restriction endonuclease zf_C2HC_14 PF18574.1 NODE_70075_length_225_cov_88.657895_g62134_i0forward_frame_1 - 0.15 11.9 0.1 0.23 11.3 0.1 1.2 1 0 0 1 1 1 0 C2HC Zing finger domain V_ATPase_I PF01496.19 NODE_70060_length_225_cov_133.452632_g62119_i0forward_frame_1 - 1.9 6.3 3.5 2.2 6.1 3.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CelTOS PF18659.1 NODE_70058_length_225_cov_159.194737_g62117_i0reverse_frame_1 - 0.096 13.1 1.3 0.11 13.0 1.3 1.1 1 0 0 1 1 1 0 Cell-traversal protein for ookinetes and sporozoites TMEM247 PF15444.6 NODE_70057_length_225_cov_167.294737_g62116_i0reverse_frame_1 - 0.45 10.5 3.3 0.52 10.3 3.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 DUF702 PF05142.12 NODE_70055_length_225_cov_198.531579_g62114_i0forward_frame_1 - 0.015 15.8 5.4 0.019 15.5 5.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF702) amfpi-1 PF12190.8 NODE_70053_length_225_cov_246.905263_g62112_i0forward_frame_1 - 0.036 14.7 3.8 0.041 14.5 3.8 1.1 1 0 0 1 1 1 0 Fungal protease inhibitor MORN PF02493.20 NODE_70050_length_225_cov_412.800000_g62109_i0reverse_frame_1 - 0.0037 17.1 9.2 0.0087 15.9 1.8 3.4 3 1 0 3 3 3 2 MORN repeat DUF1391 PF07151.12 NODE_70050_length_225_cov_412.800000_g62109_i0reverse_frame_1 - 0.067 13.0 0.1 0.092 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1391) Glyco_hydro_127 PF07944.12 NODE_70047_length_225_cov_1355.284211_g62106_i0forward_frame_1 - 0.25 9.8 1.5 0.3 9.5 1.5 1.1 1 0 0 1 1 1 0 Beta-L-arabinofuranosidase, GH127 DUF2703 PF10865.8 NODE_70043_length_226_cov_0.832461_g62102_i0forward_frame_2 - 0.19 11.9 0.2 0.19 11.9 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2703) zf_PR_Knuckle PF18445.1 NODE_70039_length_226_cov_0.837696_g62098_i0forward_frame_3 - 0.043 13.6 0.4 0.066 13.0 0.2 1.4 1 1 0 1 1 1 0 PR zinc knuckle motif Shisa PF13908.6 NODE_70037_length_226_cov_0.837696_g62096_i0reverse_frame_3 - 0.16 12.2 0.1 0.19 11.9 0.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator 2TM PF13239.6 NODE_70024_length_226_cov_1.083770_g62083_i0forward_frame_2 - 0.08 13.3 2.0 0.099 13.0 2.0 1.1 1 0 0 1 1 1 0 2TM domain Exo84_C PF16528.5 NODE_70024_length_226_cov_1.083770_g62083_i0forward_frame_2 - 0.09 12.6 0.5 0.1 12.4 0.5 1.1 1 0 0 1 1 1 0 Exocyst component 84 C-terminal Pannexin_like PF12534.8 NODE_70022_length_226_cov_1.089005_g62081_i0forward_frame_2 - 0.0083 15.2 1.9 0.0088 15.2 1.9 1.0 1 0 0 1 1 1 1 Pannexin-like TM region of LRRC8 Trypan_PARP PF05887.11 NODE_70021_length_226_cov_1.094241_g62080_i0reverse_frame_3 - 0.078 13.0 5.1 0.078 13.0 5.1 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) FA_desaturase PF00487.24 NODE_70021_length_226_cov_1.094241_g62080_i0forward_frame_2 - 4.2 7.1 5.2 4.1 7.2 5.2 1.0 1 0 0 1 1 1 0 Fatty acid desaturase PyocinActivator PF11112.8 NODE_70016_length_226_cov_1.146597_g62075_i0reverse_frame_3 - 0.034 14.3 0.1 0.054 13.6 0.1 1.3 1 0 0 1 1 1 0 Pyocin activator protein PrtN partial_CstF PF15861.5 NODE_70015_length_226_cov_1.151832_g62074_i0reverse_frame_3 - 0.004 16.9 0.0 0.0049 16.6 0.0 1.1 1 0 0 1 1 1 1 Partial cleavage stimulation factor domain Granulin PF00396.18 NODE_70013_length_226_cov_1.151832_g62072_i0reverse_frame_2 - 0.023 15.0 2.2 0.023 15.0 2.2 1.6 2 0 0 2 2 2 0 Granulin Chor_lyase PF04345.13 NODE_70013_length_226_cov_1.151832_g62072_i0forward_frame_3 - 0.011 15.4 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Chorismate lyase Lamprin PF06403.11 NODE_70010_length_226_cov_1.172775_g62069_i0forward_frame_3 - 0.14 12.1 4.3 0.3 11.1 4.3 1.6 1 1 0 1 1 1 0 Lamprin Popeye PF04831.13 NODE_70009_length_226_cov_1.178010_g62068_i0reverse_frame_2 - 1.1 9.4 5.4 1.4 9.1 5.4 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Emaravirus_P4 PF16505.5 NODE_70009_length_226_cov_1.178010_g62068_i0forward_frame_2 - 0.12 11.4 0.1 0.12 11.4 0.1 1.1 1 0 0 1 1 1 0 P4 movement protein of Emaravirus, and the 30K superfamily Glyco_transf_36 PF06165.11 NODE_70008_length_226_cov_1.183246_g62067_i0reverse_frame_3 - 0.1 12.0 0.0 0.1 12.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 36 Tnp_DNA_bind PF14706.6 NODE_70004_length_226_cov_1.235602_g62063_i0forward_frame_2 - 0.33 10.8 3.5 0.38 10.6 1.2 2.0 2 0 0 2 2 2 0 Transposase DNA-binding MarR PF01047.22 NODE_70001_length_226_cov_1.246073_g62060_i0reverse_frame_3 - 0.031 14.2 0.1 0.049 13.6 0.1 1.3 1 0 0 1 1 1 0 MarR family DUF1712 PF08217.11 NODE_70000_length_226_cov_1.251309_g62059_i0forward_frame_3 - 0.056 11.9 0.1 0.062 11.8 0.1 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1712) dCMP_cyt_deam_2 PF08211.12 NODE_69998_length_226_cov_1.251309_g62057_i0reverse_frame_2 - 0.18 12.0 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region Mtd_N PF18454.1 NODE_69997_length_226_cov_1.256545_g62056_i0reverse_frame_2 - 0.0028 17.6 0.0 0.0044 17.0 0.0 1.3 1 0 0 1 1 1 1 Major tropism determinant N-terminal domain DUF5555 PF17710.1 NODE_69997_length_226_cov_1.256545_g62056_i0forward_frame_3 - 0.0063 16.1 1.0 0.0064 16.1 1.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5555) WD40 PF00400.32 NODE_69996_length_226_cov_1.256545_g62055_i0forward_frame_3 - 1.7e-15 57.2 3.0 4.5e-10 39.9 0.5 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_69996_length_226_cov_1.256545_g62055_i0forward_frame_3 - 0.018 15.3 0.0 0.16 12.3 0.0 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 NODE_69996_length_226_cov_1.256545_g62055_i0forward_frame_3 - 0.019 13.9 0.0 0.98 8.3 0.0 2.0 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein FliO PF04347.13 NODE_69993_length_226_cov_1.256545_g62052_i0forward_frame_3 - 0.15 12.4 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Flagellar biosynthesis protein, FliO Ku_PK_bind PF08785.11 NODE_69988_length_226_cov_1.293194_g62047_i0reverse_frame_2 - 0.045 13.9 0.2 0.064 13.4 0.2 1.3 1 0 0 1 1 1 0 Ku C terminal domain like ApoM PF11032.8 NODE_69986_length_226_cov_1.345550_g62045_i0reverse_frame_3 - 0.069 12.8 0.3 0.072 12.8 0.3 1.1 1 0 0 1 1 1 0 ApoM domain Ovate PF04844.13 NODE_69986_length_226_cov_1.345550_g62045_i0forward_frame_2 - 0.063 13.3 0.0 0.088 12.8 0.0 1.2 1 0 0 1 1 1 0 Transcriptional repressor, ovate Pox_E10 PF04805.12 NODE_69984_length_226_cov_1.356021_g62043_i0reverse_frame_3 - 0.24 11.3 0.1 0.31 10.9 0.1 1.1 1 0 0 1 1 1 0 E10-like protein conserved region DUF3709 PF12493.8 NODE_69981_length_226_cov_1.429319_g62040_i0forward_frame_3 - 2.8 8.0 6.9 0.18 11.8 1.2 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3709) MFS_1 PF07690.16 NODE_69980_length_226_cov_1.429319_g62039_i0forward_frame_3 - 2.5e-06 26.7 0.4 3.3e-06 26.3 0.4 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily TILa PF12714.7 NODE_69978_length_226_cov_1.439791_g62037_i0reverse_frame_3 - 6.6 6.8 9.5 1.9 8.5 5.2 2.2 1 1 1 2 2 2 0 TILa domain MPC PF03650.13 NODE_69973_length_226_cov_1.486911_g62032_i0forward_frame_2 - 0.11 12.7 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 Mitochondrial pyruvate carriers DUF1514 PF07438.11 NODE_69972_length_226_cov_1.492147_g62031_i0forward_frame_2 - 0.32 10.9 4.9 0.49 10.3 3.4 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1514) zf_UBZ PF18439.1 NODE_69971_length_226_cov_1.507853_g62030_i0reverse_frame_3 - 0.21 11.2 0.7 0.3 10.7 0.7 1.2 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger DUF236 PF03057.14 NODE_69971_length_226_cov_1.507853_g62030_i0forward_frame_3 - 0.2 11.7 0.1 0.26 11.3 0.1 1.1 1 0 0 1 1 1 0 DUF236 repeat APC1_C PF18122.1 NODE_69968_length_226_cov_1.528796_g62027_i0reverse_frame_3 - 0.035 14.1 1.6 0.038 13.9 1.6 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex sub unit 1 C-terminal domain RED_N PF07808.13 NODE_69968_length_226_cov_1.528796_g62027_i0forward_frame_3 - 0.045 13.3 0.1 0.051 13.2 0.1 1.1 1 0 0 1 1 1 0 RED-like protein N-terminal region LRV PF01816.17 NODE_69965_length_226_cov_1.565445_g62024_i0forward_frame_2 - 0.058 13.8 0.5 0.058 13.8 0.5 2.1 2 0 0 2 2 2 0 Leucine rich repeat variant DUF4407 PF14362.6 NODE_69964_length_226_cov_1.575916_g62023_i0forward_frame_3 - 0.17 11.2 0.3 0.2 11.0 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Dicty_CTDC PF00526.18 NODE_69956_length_226_cov_1.638743_g62015_i0reverse_frame_2 - 2.5 8.1 5.6 9 6.3 0.4 2.6 2 1 0 2 2 2 0 Dictyostelium (slime mold) repeat FAM196 PF15265.6 NODE_69956_length_226_cov_1.638743_g62015_i0forward_frame_3 - 0.23 10.9 0.3 0.31 10.5 0.3 1.2 1 0 0 1 1 1 0 FAM196 family F-box-like PF12937.7 NODE_69956_length_226_cov_1.638743_g62015_i0forward_frame_2 - 0.034 14.0 0.6 0.056 13.3 0.6 1.6 1 1 0 1 1 1 0 F-box-like DUF2153 PF09921.9 NODE_69956_length_226_cov_1.638743_g62015_i0forward_frame_2 - 0.086 12.7 0.1 0.1 12.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2153) HTH_Tnp_Tc3_1 PF11427.8 NODE_69954_length_226_cov_1.643979_g62013_i0forward_frame_3 - 2.2 8.2 5.3 15 5.6 1.8 2.2 2 0 0 2 2 2 0 Tc3 transposase Bac_rhodopsin PF01036.18 NODE_69948_length_226_cov_1.675393_g62007_i0reverse_frame_2 - 0.083 12.5 0.4 0.096 12.3 0.4 1.0 1 0 0 1 1 1 0 Bacteriorhodopsin-like protein MOZART2 PF12926.7 NODE_69948_length_226_cov_1.675393_g62007_i0forward_frame_3 - 0.071 12.7 0.1 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 Mitotic-spindle organizing gamma-tubulin ring associated Ion_trans PF00520.31 NODE_69941_length_226_cov_1.722513_g62000_i0forward_frame_2 - 0.045 13.0 2.2 0.05 12.8 2.2 1.1 1 0 0 1 1 1 0 Ion transport protein UDPG_MGDP_dh_N PF03721.14 NODE_69939_length_226_cov_1.738220_g61998_i0forward_frame_2 - 0.048 13.2 0.1 0.055 13.0 0.1 1.1 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Inhibitor_I29 PF08246.12 NODE_69937_length_226_cov_1.753927_g61996_i0reverse_frame_3 - 0.03 14.8 1.3 0.042 14.3 1.3 1.2 1 0 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) ABC2_membrane_3 PF12698.7 NODE_69927_length_226_cov_1.874346_g61986_i0reverse_frame_2 - 3.5e-05 23.1 0.3 3.5e-05 23.1 0.3 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein EptA_B_N PF08019.12 NODE_69927_length_226_cov_1.874346_g61986_i0reverse_frame_2 - 0.061 13.2 0.1 0.067 13.1 0.1 1.0 1 0 0 1 1 1 0 Phosphoethanolamine transferase EptA/EptB DUF809 PF05663.11 NODE_69927_length_226_cov_1.874346_g61986_i0forward_frame_3 - 0.35 11.0 0.8 0.51 10.5 0.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF809) DUF4305 PF14146.6 NODE_69926_length_226_cov_1.879581_g61985_i0reverse_frame_2 - 0.096 12.9 1.7 0.18 12.0 1.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4305) Imm32 PF15566.6 NODE_69924_length_226_cov_1.890052_g61983_i0forward_frame_2 - 0.013 15.3 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 32 Porin_10 PF14121.6 NODE_69923_length_226_cov_1.905759_g61982_i0reverse_frame_2 - 0.0025 16.5 0.3 0.0025 16.5 0.3 1.0 1 0 0 1 1 1 1 Putative porin Borrelia_orfX PF04160.12 NODE_69920_length_226_cov_1.947644_g61979_i0forward_frame_2 - 0.01 15.9 0.7 0.01 15.8 0.7 1.1 1 0 0 1 1 1 0 Orf-X protein Hist_deacetyl PF00850.19 NODE_69918_length_226_cov_1.979058_g61977_i0forward_frame_2 - 5.4e-22 78.6 0.0 5.7e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain PspC PF04024.12 NODE_69917_length_226_cov_1.979058_g61976_i0forward_frame_3 - 0.1 12.4 0.3 0.14 12.0 0.3 1.2 1 0 0 1 1 1 0 PspC domain DUF3099 PF11298.8 NODE_69913_length_226_cov_2.089005_g61972_i0reverse_frame_3 - 0.012 15.8 0.0 0.019 15.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) UPF0114 PF03350.16 NODE_69911_length_226_cov_2.146597_g61970_i0forward_frame_2 - 0.076 13.2 0.1 0.088 13.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein family, UPF0114 DUF5433 PF17498.2 NODE_69910_length_226_cov_2.172775_g61969_i0forward_frame_2 - 0.13 12.5 10.2 0.24 11.6 1.5 2.9 1 1 2 3 3 3 0 Family of unknown function (DUF5433) PsbT PF01405.17 NODE_69908_length_226_cov_2.188482_g61967_i0reverse_frame_2 - 0.071 12.9 0.4 0.12 12.2 0.4 1.4 1 0 0 1 1 1 0 Photosystem II reaction centre T protein AChE_tetra PF08674.10 NODE_69907_length_226_cov_2.193717_g61966_i0forward_frame_3 - 0.044 13.5 1.8 0.13 11.9 1.2 2.0 1 1 1 2 2 2 0 Acetylcholinesterase tetramerisation domain Ribonuc_red_sm PF00268.21 NODE_69904_length_226_cov_2.235602_g61963_i0reverse_frame_3 - 1.7e-12 47.4 0.4 1.8e-12 47.3 0.4 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Ubiquitin_4 PF18036.1 NODE_69900_length_226_cov_2.298429_g61959_i0forward_frame_2 - 0.017 15.1 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin-like domain CDP-OH_P_transf PF01066.21 NODE_69899_length_226_cov_2.319372_g61958_i0forward_frame_3 - 0.041 14.6 0.2 0.055 14.3 0.2 1.3 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase DHO_dh PF01180.21 NODE_69896_length_226_cov_2.413613_g61955_i0forward_frame_3 - 5e-14 52.2 0.0 5.4e-14 52.1 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase DUF2401 PF10287.9 NODE_69896_length_226_cov_2.413613_g61955_i0forward_frame_2 - 0.044 13.4 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 Putative TOS1-like glycosyl hydrolase (DUF2401) FdhE PF04216.12 NODE_69895_length_226_cov_2.465969_g61954_i0reverse_frame_3 - 0.022 14.7 1.9 0.024 14.5 1.9 1.0 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation DUF2109 PF09882.9 NODE_69895_length_226_cov_2.465969_g61954_i0forward_frame_2 - 0.84 9.7 8.3 1.4 9.0 7.4 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2109) H2O2_YaaD PF03883.14 NODE_69894_length_226_cov_2.492147_g61953_i0forward_frame_3 - 0.2 11.2 0.0 0.2 11.1 0.0 1.0 1 0 0 1 1 1 0 Peroxide stress protein YaaA Peptidase_S28 PF05577.12 NODE_69891_length_226_cov_2.612565_g61950_i0reverse_frame_3 - 0.16 10.7 3.0 0.17 10.7 3.0 1.0 1 0 0 1 1 1 0 Serine carboxypeptidase S28 Pkinase PF00069.25 NODE_69888_length_226_cov_2.675393_g61947_i0reverse_frame_2 - 0.0059 16.0 0.0 0.0067 15.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pox_TAA1 PF03295.14 NODE_69887_length_226_cov_2.712042_g61946_i0reverse_frame_3 - 0.0016 18.3 0.0 0.0022 17.9 0.0 1.2 1 0 0 1 1 1 1 Poxvirus trans-activator protein A1 C-terminal HTH_OrfB_IS605 PF12323.8 NODE_69887_length_226_cov_2.712042_g61946_i0reverse_frame_3 - 0.038 13.5 0.3 0.053 13.0 0.3 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain MFS_1 PF07690.16 NODE_69883_length_226_cov_2.743455_g61942_i0reverse_frame_2 - 4.3e-08 32.5 0.2 4.8e-08 32.3 0.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Raf1_HTH PF18579.1 NODE_69883_length_226_cov_2.743455_g61942_i0reverse_frame_2 - 0.011 15.4 0.0 0.017 14.8 0.0 1.3 1 0 0 1 1 1 0 Rubisco accumulation factor 1 helix turn helix domain Eclosion PF04736.12 NODE_69883_length_226_cov_2.743455_g61942_i0forward_frame_3 - 0.032 13.9 0.3 0.049 13.3 0.3 1.3 1 0 0 1 1 1 0 Eclosion hormone AAA PF00004.29 NODE_69882_length_226_cov_2.748691_g61941_i0forward_frame_2 - 3.2e-16 60.0 0.1 3.6e-16 59.8 0.1 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF3437 PF11919.8 NODE_69880_length_226_cov_2.874346_g61939_i0reverse_frame_2 - 0.067 13.1 0.0 0.074 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) DUF3379 PF11859.8 NODE_69879_length_226_cov_2.884817_g61938_i0forward_frame_3 - 0.084 12.2 0.1 0.1 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) IF2_N PF04760.15 NODE_69879_length_226_cov_2.884817_g61938_i0forward_frame_3 - 0.098 12.5 0.3 3.1 7.7 0.1 2.2 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region Lipid_bd PF12888.7 NODE_69878_length_226_cov_2.916230_g61937_i0reverse_frame_2 - 0.03 14.7 0.1 0.035 14.5 0.1 1.1 1 0 0 1 1 1 0 Lipid-binding putative hydrolase tRNA-synt_2_TM PF16995.5 NODE_69876_length_226_cov_2.963351_g61935_i0reverse_frame_3 - 0.041 13.6 0.9 0.045 13.4 0.9 1.1 1 0 0 1 1 1 0 Transmembrane region of lysyl-tRNA synthetase Fer4_21 PF14697.6 NODE_69876_length_226_cov_2.963351_g61935_i0reverse_frame_2 - 0.011 15.9 0.1 0.014 15.5 0.1 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.27 NODE_69876_length_226_cov_2.963351_g61935_i0reverse_frame_2 - 0.027 14.3 0.9 0.039 13.8 0.9 1.3 1 0 0 1 1 1 0 4Fe-4S binding domain Rad54_N PF08658.10 NODE_69868_length_226_cov_4.261780_g61927_i0forward_frame_3 - 0.16 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Rad54 N terminal IMD PF08397.11 NODE_69867_length_226_cov_4.329843_g61926_i0reverse_frame_2 - 0.044 13.2 1.6 0.046 13.1 1.6 1.1 1 0 0 1 1 1 0 IRSp53/MIM homology domain Flu_B_M2 PF04772.12 NODE_69867_length_226_cov_4.329843_g61926_i0reverse_frame_2 - 0.05 13.8 1.2 0.094 13.0 1.2 1.5 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) TMCO5 PF14992.6 NODE_69867_length_226_cov_4.329843_g61926_i0reverse_frame_2 - 0.052 13.1 3.5 0.053 13.1 3.5 1.0 1 0 0 1 1 1 0 TMCO5 family Clathrin-link PF09268.10 NODE_69867_length_226_cov_4.329843_g61926_i0forward_frame_3 - 0.15 11.5 0.1 0.2 11.0 0.1 1.2 1 0 0 1 1 1 0 Clathrin, heavy-chain linker MpPF26 PF07666.11 NODE_69866_length_226_cov_4.486911_g61925_i0forward_frame_3 - 0.05 13.7 2.3 0.062 13.4 2.3 1.0 1 0 0 1 1 1 0 M penetrans paralogue family 26 Spike_torovirin PF17072.5 NODE_69866_length_226_cov_4.486911_g61925_i0forward_frame_3 - 0.063 10.4 0.7 0.071 10.3 0.7 1.0 1 0 0 1 1 1 0 Torovirinae spike glycoprotein DSL PF01414.19 NODE_69860_length_226_cov_19.916230_g61919_i0reverse_frame_3 - 0.039 14.2 0.4 0.053 13.8 0.4 1.2 1 0 0 1 1 1 0 Delta serrate ligand ChAPs PF09295.10 NODE_69858_length_226_cov_21.643979_g61917_i0reverse_frame_3 - 0.18 10.7 0.0 0.19 10.7 0.0 1.0 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) IL3Ra_N PF18611.1 NODE_69857_length_226_cov_22.675393_g61916_i0reverse_frame_3 - 0.29 11.2 4.0 6.6 6.8 1.8 2.2 1 1 1 2 2 2 0 IL-3 receptor alpha chain N-terminal domain GlyL_C PF12524.8 NODE_69857_length_226_cov_22.675393_g61916_i0forward_frame_2 - 0.46 10.7 4.6 0.92 9.7 2.1 2.0 1 1 1 2 2 2 0 dsDNA virus glycoprotein L C terminal zf-rbx1 PF12678.7 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 5.4e-07 29.8 2.2 7.9e-07 29.3 2.2 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 1.2e-06 28.8 3.2 1.5e-06 28.4 3.2 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 2.3e-06 27.3 4.0 3.3e-06 26.8 4.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 0.00015 21.7 1.9 0.00022 21.1 1.9 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 0.00039 20.2 4.3 0.00066 19.5 4.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 0.0033 17.3 1.7 0.0051 16.6 1.7 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 0.0095 16.0 0.5 0.013 15.6 0.5 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING-like PF08746.11 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 0.012 16.0 3.6 0.019 15.3 3.6 1.4 1 0 0 1 1 1 0 RING-like domain zf-Nse PF11789.8 NODE_69853_length_226_cov_32.565445_g61912_i0reverse_frame_3 - 0.18 11.7 2.6 0.29 11.0 2.6 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit His_Phos_1 PF00300.22 NODE_69850_length_226_cov_38.664921_g61909_i0reverse_frame_3 - 0.0049 16.6 0.0 0.0049 16.6 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks358.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks358.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks358.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks358.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:21:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-FPG_IleRS PF06827.14 NODE_69844_length_226_cov_42.832461_g61903_i0reverse_frame_2 - 0.074 12.9 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS HNH_2 PF13391.6 NODE_69844_length_226_cov_42.832461_g61903_i0forward_frame_3 - 0.89 9.7 4.6 3.1 8.0 0.2 2.3 1 1 1 2 2 2 0 HNH endonuclease DUF765 PF05570.11 NODE_69842_length_226_cov_44.392670_g61901_i0reverse_frame_3 - 0.093 12.9 0.5 0.093 12.9 0.5 2.2 2 0 0 2 2 2 0 Circovirus protein of unknown function (DUF765) UB2H PF14814.6 NODE_69842_length_226_cov_44.392670_g61901_i0forward_frame_2 - 0.093 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain zf-U1 PF06220.12 NODE_69840_length_226_cov_46.910995_g61899_i0reverse_frame_2 - 0.025 14.3 0.5 0.19 11.5 0.2 2.1 2 0 0 2 2 2 0 U1 zinc finger zf-TFIIIC PF12660.7 NODE_69838_length_226_cov_49.005236_g61897_i0forward_frame_3 - 0.061 13.3 0.1 0.087 12.8 0.1 1.2 1 0 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex Rsm1 PF08600.10 NODE_69838_length_226_cov_49.005236_g61897_i0forward_frame_3 - 0.093 12.9 0.7 0.16 12.2 0.7 1.4 1 1 0 1 1 1 0 Rsm1-like TMEM213 PF15192.6 NODE_69837_length_226_cov_49.722513_g61896_i0forward_frame_3 - 0.023 14.7 3.2 0.023 14.7 3.2 1.4 1 1 0 1 1 1 0 TMEM213 family PhoLip_ATPase_N PF16209.5 NODE_69835_length_226_cov_50.570681_g61894_i0reverse_frame_3 - 1.8 8.3 8.5 0.46 10.2 0.5 2.4 1 1 1 2 2 2 0 Phospholipid-translocating ATPase N-terminal Tsc35 PF15079.6 NODE_69832_length_226_cov_52.549738_g61891_i0reverse_frame_2 - 0.089 12.4 0.0 0.089 12.4 0.0 1.0 1 0 0 1 1 1 0 Testis-specific protein 35 VQ PF05678.14 NODE_69828_length_226_cov_57.157068_g61887_i0reverse_frame_2 - 0.088 12.3 0.1 0.17 11.4 0.1 1.4 1 0 0 1 1 1 0 VQ motif EF-hand_8 PF13833.6 NODE_69827_length_226_cov_57.193717_g61886_i0reverse_frame_2 - 0.00065 19.5 1.0 0.00076 19.3 1.0 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 NODE_69827_length_226_cov_57.193717_g61886_i0reverse_frame_2 - 0.047 14.1 0.3 0.053 14.0 0.3 1.1 1 0 0 1 1 1 0 EF-hand domain pair Peptidase_C1 PF00112.23 NODE_69826_length_226_cov_57.575916_g61885_i0forward_frame_3 - 3.5e-08 33.8 0.5 3.8e-08 33.7 0.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 NODE_69826_length_226_cov_57.575916_g61885_i0forward_frame_3 - 0.0018 17.1 0.4 0.0019 17.1 0.4 1.0 1 0 0 1 1 1 1 Peptidase C1-like family MPM1 PF17234.2 NODE_69825_length_226_cov_58.827225_g61884_i0forward_frame_3 - 0.14 12.4 0.1 0.16 12.2 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 Herpes_U30 PF04523.13 NODE_69821_length_226_cov_66.015707_g61880_i0forward_frame_2 - 0.9 7.3 3.5 0.95 7.3 3.5 1.0 1 0 0 1 1 1 0 Herpes virus tegument protein U30 Retrotran_gag_2 PF14223.6 NODE_69819_length_226_cov_71.089005_g61878_i0reverse_frame_2 - 0.064 12.9 0.2 0.074 12.7 0.2 1.1 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type tRNA_U5-meth_tr PF05958.11 NODE_69815_length_226_cov_80.890052_g61874_i0forward_frame_2 - 1.5e-05 24.2 0.0 1.9e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase DUF2706 PF10913.8 NODE_69814_length_226_cov_81.769634_g61873_i0forward_frame_3 - 1.7 8.5 6.9 1.3 9.0 5.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2706) DUF3409 PF11889.8 NODE_69810_length_226_cov_86.926702_g61869_i0forward_frame_2 - 0.089 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3409) DUF2859 PF11072.8 NODE_69809_length_226_cov_90.643979_g61868_i0forward_frame_3 - 0.096 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2859) Herpes_IE68 PF02479.16 NODE_69807_length_226_cov_92.465969_g61866_i0reverse_frame_2 - 0.079 12.6 0.1 0.086 12.4 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus immediate early protein Gamma-thionin PF00304.20 NODE_69807_length_226_cov_92.465969_g61866_i0forward_frame_3 - 0.03 14.6 0.4 0.04 14.2 0.4 1.2 1 0 0 1 1 1 0 Gamma-thionin family SWIM PF04434.17 NODE_69806_length_226_cov_97.465969_g61865_i0reverse_frame_2 - 0.071 12.8 1.6 0.12 12.0 1.6 1.4 1 0 0 1 1 1 0 SWIM zinc finger UL40 PF10682.9 NODE_69803_length_226_cov_120.057592_g61862_i0reverse_frame_3 - 0.0073 16.0 4.4 0.0083 15.8 4.4 1.0 1 0 0 1 1 1 1 Glycoprotein of human cytomegalovirus HHV-5 UPF0731 PF14982.6 NODE_69803_length_226_cov_120.057592_g61862_i0forward_frame_3 - 0.15 12.3 0.1 0.19 11.9 0.1 1.1 1 0 0 1 1 1 0 UPF0731 family TSR PF18487.1 NODE_69802_length_226_cov_137.617801_g61861_i0forward_frame_3 - 0.81 10.0 5.3 0.42 10.9 0.9 2.4 2 1 1 3 3 3 0 Thrombospondin type 1 repeat PPR_2 PF13041.6 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.0004 20.5 0.0 0.051 13.8 0.0 2.4 1 1 1 2 2 2 2 PPR repeat family PPR PF01535.20 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.00052 20.1 0.0 0.027 14.7 0.0 2.2 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.0021 17.7 0.0 0.13 12.0 0.0 2.6 3 0 0 3 3 3 1 PPR repeat PPR_3 PF13812.6 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.0037 17.3 0.0 0.53 10.4 0.0 2.2 1 1 1 2 2 2 2 Pentatricopeptide repeat domain TPR_8 PF13181.6 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.056 13.7 0.7 0.16 12.2 0.1 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_69798_length_226_cov_199.319372_g61857_i0forward_frame_2 - 0.35 11.5 3.7 3 8.6 0.4 2.3 1 1 1 2 2 2 0 Tetratricopeptide repeat Glyco_transf_5 PF08323.11 NODE_69797_length_226_cov_204.136126_g61856_i0reverse_frame_3 - 0.0093 15.7 0.0 0.0095 15.7 0.0 1.0 1 0 0 1 1 1 1 Starch synthase catalytic domain IQCJ-SCHIP1 PF15157.6 NODE_69797_length_226_cov_204.136126_g61856_i0forward_frame_3 - 0.21 11.4 0.1 0.21 11.4 0.1 1.1 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif DUF4520 PF15016.6 NODE_69797_length_226_cov_204.136126_g61856_i0forward_frame_2 - 0.097 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4520) HTS PF04204.16 NODE_69796_length_226_cov_211.502618_g61855_i0reverse_frame_2 - 0.18 10.7 0.0 0.21 10.5 0.0 1.0 1 0 0 1 1 1 0 Homoserine O-succinyltransferase SecIII_SopE_N PF05364.14 NODE_69796_length_226_cov_211.502618_g61855_i0forward_frame_3 - 0.096 12.8 0.8 0.12 12.4 0.8 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus NdhL PF10716.9 NODE_69796_length_226_cov_211.502618_g61855_i0forward_frame_2 - 6 6.9 7.2 8.7 6.4 7.2 1.3 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit Lambda_CIII PF02061.16 NODE_69786_length_227_cov_0.828125_g61845_i0reverse_frame_2 - 0.04 14.0 0.2 0.069 13.2 0.2 1.4 1 0 0 1 1 1 0 Lambda Phage CIII HTH_51 PF18558.1 NODE_69783_length_227_cov_0.833333_g61842_i0forward_frame_2 - 0.17 11.8 0.0 0.2 11.6 0.0 1.0 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1911 PF08929.10 NODE_69782_length_227_cov_0.833333_g61841_i0reverse_frame_2 - 0.096 13.5 1.5 0.12 13.2 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1911) zf_C2H2_13 PF18508.1 NODE_69778_length_227_cov_0.875000_g61837_i0reverse_frame_3 - 0.062 12.9 0.1 0.092 12.3 0.1 1.2 1 0 0 1 1 1 0 Zinc finger domain Caskin-Pro-rich PF16907.5 NODE_69778_length_227_cov_0.875000_g61837_i0forward_frame_3 - 0.12 12.9 0.4 0.14 12.7 0.4 1.0 1 0 0 1 1 1 0 Proline rich region of Caskin proteins DUF4513 PF14983.6 NODE_69776_length_227_cov_0.901042_g61835_i0reverse_frame_2 - 0.12 12.5 0.0 0.14 12.3 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4513) DUF3552 PF12072.8 NODE_69773_length_227_cov_0.942708_g61832_i0forward_frame_3 - 0.18 11.2 17.6 0.21 11.0 17.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) MPS2 PF17060.5 NODE_69773_length_227_cov_0.942708_g61832_i0forward_frame_3 - 0.32 10.2 8.9 0.38 10.0 8.9 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 Atg14 PF10186.9 NODE_69773_length_227_cov_0.942708_g61832_i0forward_frame_3 - 0.89 8.6 10.6 0.97 8.5 10.6 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 AAA_23 PF13476.6 NODE_69773_length_227_cov_0.942708_g61832_i0forward_frame_3 - 7.8 6.9 13.7 8.3 6.9 13.7 1.1 1 0 0 1 1 1 0 AAA domain zf-CXXC PF02008.20 NODE_69770_length_227_cov_0.973958_g61829_i0reverse_frame_2 - 0.034 14.2 2.1 0.034 14.2 2.1 1.5 2 0 0 2 2 2 0 CXXC zinc finger domain Herpes_UL16 PF03044.14 NODE_69769_length_227_cov_0.989583_g61828_i0forward_frame_2 - 0.083 12.2 0.0 0.092 12.0 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family B3R PF17057.5 NODE_69767_length_227_cov_1.036458_g61826_i0forward_frame_3 - 0.15 12.3 0.1 0.18 12.0 0.1 1.1 1 0 0 1 1 1 0 Poxviridae B3 protein DSL PF01414.19 NODE_69765_length_227_cov_1.036458_g61824_i0reverse_frame_2 - 0.052 13.8 2.0 0.065 13.5 2.0 1.2 1 0 0 1 1 1 0 Delta serrate ligand CxC6 PF18721.1 NODE_69764_length_227_cov_1.041667_g61823_i0reverse_frame_3 - 0.084 13.1 0.2 0.1 12.9 0.2 1.2 1 0 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases SWIM PF04434.17 NODE_69764_length_227_cov_1.041667_g61823_i0reverse_frame_2 - 0.01 15.5 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 0 SWIM zinc finger T4-Gluco-transf PF09198.10 NODE_69762_length_227_cov_1.119792_g61821_i0forward_frame_3 - 0.026 14.1 0.0 0.052 13.2 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase Paramyxo_NS_C PF02725.14 NODE_69760_length_227_cov_1.151042_g61819_i0forward_frame_3 - 0.33 11.1 2.9 0.36 10.9 2.9 1.1 1 0 0 1 1 1 0 Non-structural protein C DUF3716 PF12511.8 NODE_69758_length_227_cov_1.218750_g61817_i0reverse_frame_2 - 0.52 10.4 6.4 2.4 8.3 6.4 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) PIN_12 PF16289.5 NODE_69757_length_227_cov_1.229167_g61816_i0forward_frame_2 - 0.041 14.4 0.3 0.045 14.2 0.3 1.0 1 0 0 1 1 1 0 PIN domain Med10 PF09748.9 NODE_69750_length_227_cov_1.244792_g61809_i0forward_frame_3 - 0.019 15.0 0.1 0.02 14.9 0.1 1.0 1 0 0 1 1 1 0 Transcription factor subunit Med10 of Mediator complex PPDK_N PF01326.19 NODE_69750_length_227_cov_1.244792_g61809_i0forward_frame_3 - 0.15 11.3 0.1 0.17 11.1 0.1 1.0 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Svf1_C PF17187.4 NODE_69750_length_227_cov_1.244792_g61809_i0forward_frame_2 - 0.059 13.2 0.3 0.063 13.1 0.3 1.1 1 0 0 1 1 1 0 Svf1-like C-terminal lipocalin-like domain DUF3039 PF11238.8 NODE_69745_length_227_cov_1.250000_g61804_i0reverse_frame_2 - 0.038 13.8 0.8 0.038 13.8 0.8 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) DUF3439 PF11921.8 NODE_69744_length_227_cov_1.250000_g61803_i0reverse_frame_3 - 0.16 11.9 3.4 0.18 11.7 3.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) RPN1_C PF18051.1 NODE_69744_length_227_cov_1.250000_g61803_i0forward_frame_3 - 0.14 12.3 0.7 0.19 11.8 0.7 1.3 1 0 0 1 1 1 0 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal Adeno_PV PF03910.13 NODE_69744_length_227_cov_1.250000_g61803_i0forward_frame_3 - 0.18 10.5 0.2 0.22 10.2 0.2 1.0 1 0 0 1 1 1 0 Adenovirus minor core protein PV PIP49_C PF12260.8 NODE_69742_length_227_cov_1.250000_g61801_i0reverse_frame_2 - 0.031 13.9 1.4 0.038 13.6 1.4 1.0 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 WBP-1 PF11669.8 NODE_69741_length_227_cov_1.260417_g61800_i0forward_frame_3 - 1.7 9.3 5.2 2.5 8.8 5.2 1.3 1 0 0 1 1 1 0 WW domain-binding protein 1 DUF2070 PF09843.9 NODE_69736_length_227_cov_1.322917_g61795_i0reverse_frame_3 - 0.13 10.6 5.9 0.14 10.5 5.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF1231 PF06802.11 NODE_69736_length_227_cov_1.322917_g61795_i0forward_frame_3 - 0.13 11.4 3.7 0.13 11.4 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1231) Fer4_10 PF13237.6 NODE_69733_length_227_cov_1.343750_g61792_i0forward_frame_3 - 0.025 14.7 2.7 0.046 13.8 2.7 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain HEAT_2 PF13646.6 NODE_69731_length_227_cov_1.354167_g61790_i0forward_frame_3 - 0.0015 18.9 0.3 0.0019 18.5 0.3 1.2 1 0 0 1 1 1 1 HEAT repeats HEAT_PBS PF03130.16 NODE_69731_length_227_cov_1.354167_g61790_i0forward_frame_3 - 0.088 13.5 0.8 0.088 13.5 0.8 2.0 2 0 0 2 2 2 0 PBS lyase HEAT-like repeat DUF2054 PF10218.9 NODE_69730_length_227_cov_1.375000_g61789_i0reverse_frame_3 - 0.0059 16.7 0.5 0.0069 16.5 0.5 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2054) DUF3938 PF13074.6 NODE_69729_length_227_cov_1.385417_g61788_i0forward_frame_2 - 0.11 12.7 2.7 0.17 12.2 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3938) ARL2_Bind_BART PF11527.8 NODE_69728_length_227_cov_1.395833_g61787_i0reverse_frame_2 - 8.3e-05 22.7 0.5 0.00012 22.2 0.5 1.3 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART Terpene_synth PF01397.21 NODE_69728_length_227_cov_1.395833_g61787_i0reverse_frame_2 - 0.012 15.3 1.4 0.012 15.3 1.4 1.0 1 0 0 1 1 1 0 Terpene synthase, N-terminal domain DUF2791 PF10923.8 NODE_69728_length_227_cov_1.395833_g61787_i0reverse_frame_2 - 0.22 10.4 0.5 0.24 10.2 0.5 1.0 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) Imm17 PF15562.6 NODE_69725_length_227_cov_1.416667_g61784_i0forward_frame_3 - 0.064 13.1 3.4 0.066 13.1 2.7 1.5 1 1 0 1 1 1 0 Immunity protein 17 CdiI_N PF18228.1 NODE_69723_length_227_cov_1.447917_g61782_i0reverse_frame_2 - 0.029 14.2 0.1 0.038 13.8 0.1 1.2 1 0 0 1 1 1 0 CdiI N-terminal domain Fer4_8 PF13183.6 NODE_69721_length_227_cov_1.453125_g61780_i0reverse_frame_3 - 0.019 15.4 0.2 0.025 15.0 0.2 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain SLATT_5 PF18160.1 NODE_69721_length_227_cov_1.453125_g61780_i0reverse_frame_2 - 0.1 11.9 4.3 0.12 11.7 4.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 HTH_54 PF18607.1 NODE_69721_length_227_cov_1.453125_g61780_i0forward_frame_3 - 0.033 14.2 0.1 0.052 13.6 0.1 1.4 1 1 0 1 1 1 0 ParA helix turn helix domain Chisel PF15355.6 NODE_69717_length_227_cov_1.510417_g61776_i0reverse_frame_2 - 0.082 13.1 0.0 0.092 13.0 0.0 1.1 1 0 0 1 1 1 0 Stretch-responsive small skeletal muscle X protein, Chisel Dexa_ind PF15198.6 NODE_69716_length_227_cov_1.510417_g61775_i0reverse_frame_3 - 0.51 10.5 2.3 0.38 10.9 0.3 1.7 1 1 1 2 2 2 0 Dexamethasone-induced DUF3721 PF12518.8 NODE_69715_length_227_cov_1.520833_g61774_i0forward_frame_2 - 0.06 13.2 0.4 0.086 12.7 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function Acyltransferase PF01553.21 NODE_69713_length_227_cov_1.552083_g61772_i0reverse_frame_3 - 8.1e-10 38.4 0.0 8.6e-10 38.4 0.0 1.0 1 0 0 1 1 1 1 Acyltransferase Disulph_isomer PF06491.11 NODE_69712_length_227_cov_1.552083_g61771_i0forward_frame_3 - 0.032 14.3 0.2 0.032 14.3 0.2 1.0 1 0 0 1 1 1 0 Disulphide isomerase zf-CCHC_4 PF14392.6 NODE_69712_length_227_cov_1.552083_g61771_i0forward_frame_2 - 0.0014 18.4 1.3 0.002 17.8 1.3 1.3 1 0 0 1 1 1 1 Zinc knuckle Baculo_11_kDa PF06143.11 NODE_69711_length_227_cov_1.552083_g61770_i0forward_frame_3 - 0.0028 17.2 0.4 0.0034 16.9 0.4 1.2 1 0 0 1 1 1 1 Baculovirus 11 kDa family Shisa PF13908.6 NODE_69711_length_227_cov_1.552083_g61770_i0forward_frame_3 - 0.0067 16.7 0.0 0.0069 16.6 0.0 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator Sigma_reg_N PF13800.6 NODE_69711_length_227_cov_1.552083_g61770_i0forward_frame_3 - 0.066 13.5 0.4 0.086 13.1 0.4 1.3 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF4834 PF16118.5 NODE_69711_length_227_cov_1.552083_g61770_i0forward_frame_3 - 0.067 14.2 0.0 0.082 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4359 PF14271.6 NODE_69710_length_227_cov_1.578125_g61769_i0reverse_frame_2 - 0.026 15.3 0.2 0.026 15.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4359) MotB_plug PF13677.6 NODE_69710_length_227_cov_1.578125_g61769_i0forward_frame_2 - 0.23 11.1 0.3 0.37 10.4 0.3 1.2 1 0 0 1 1 1 0 Membrane MotB of proton-channel complex MotA/MotB DUF1375 PF07119.12 NODE_69709_length_227_cov_1.578125_g61768_i0forward_frame_2 - 0.051 14.0 0.2 0.067 13.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1375) Toxin_25 PF08095.11 NODE_69707_length_227_cov_1.588542_g61766_i0forward_frame_2 - 0.031 14.2 0.2 0.06 13.3 0.2 1.5 1 0 0 1 1 1 0 Hefutoxin family DUF565 PF04483.12 NODE_69704_length_227_cov_1.593750_g61763_i0forward_frame_2 - 3.9 8.1 7.0 4 8.1 1.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF565) Wound_ind PF08186.11 NODE_69703_length_227_cov_1.604167_g61762_i0reverse_frame_3 - 0.086 13.3 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 Wound-inducible basic protein family Ubiq_cyt_C_chap PF03981.12 NODE_69702_length_227_cov_1.614583_g61761_i0reverse_frame_2 - 0.12 12.5 0.5 0.14 12.3 0.5 1.0 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone DUF2009 PF09418.10 NODE_69701_length_227_cov_1.619792_g61760_i0reverse_frame_2 - 0.19 10.8 0.1 0.23 10.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2009) DUF2089 PF09862.9 NODE_69700_length_227_cov_1.630208_g61759_i0forward_frame_2 - 0.0077 16.3 0.5 0.0087 16.1 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2089) GLE1 PF07817.13 NODE_69700_length_227_cov_1.630208_g61759_i0forward_frame_2 - 0.049 12.8 3.2 0.049 12.8 3.2 1.0 1 0 0 1 1 1 0 GLE1-like protein MLD PF11647.8 NODE_69700_length_227_cov_1.630208_g61759_i0forward_frame_2 - 0.068 13.5 0.1 0.1 12.9 0.1 1.4 1 0 0 1 1 1 0 Membrane Localization Domain TPP_enzyme_C PF02775.21 NODE_69700_length_227_cov_1.630208_g61759_i0forward_frame_2 - 0.11 12.3 0.2 0.11 12.3 0.2 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain zf-NADH-PPase PF09297.11 NODE_69697_length_227_cov_1.645833_g61756_i0forward_frame_3 - 0.13 11.9 7.6 0.3 10.8 1.1 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain BaffR-Tall_bind PF09256.10 NODE_69697_length_227_cov_1.645833_g61756_i0forward_frame_3 - 0.28 11.0 2.7 0.65 9.8 0.1 2.2 2 0 0 2 2 2 0 BAFF-R, TALL-1 binding Ion_trans PF00520.31 NODE_69697_length_227_cov_1.645833_g61756_i0forward_frame_2 - 0.15 11.3 1.4 1 8.6 0.1 2.0 1 1 1 2 2 2 0 Ion transport protein Bac_DnaA_C PF08299.11 NODE_69694_length_227_cov_1.666667_g61753_i0forward_frame_2 - 0.033 14.2 0.4 0.12 12.5 0.1 1.9 1 1 1 2 2 2 0 Bacterial dnaA protein helix-turn-helix PHD PF00628.29 NODE_69694_length_227_cov_1.666667_g61753_i0forward_frame_2 - 0.072 13.0 3.8 0.097 12.6 3.8 1.4 1 1 0 1 1 1 0 PHD-finger CsiV PF10972.8 NODE_69692_length_227_cov_1.692708_g61751_i0reverse_frame_2 - 0.025 14.3 0.0 0.025 14.3 0.0 1.0 1 0 0 1 1 1 0 Peptidoglycan-binding protein, CsiV FAD_SOX PF18371.1 NODE_69690_length_227_cov_1.708333_g61749_i0forward_frame_2 - 0.091 13.1 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase DUF815 PF05673.13 NODE_69682_length_227_cov_1.776042_g61741_i0reverse_frame_3 - 0.023 13.9 0.1 0.025 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) EbsA PF17255.2 NODE_69681_length_227_cov_1.776042_g61740_i0reverse_frame_3 - 0.1 13.0 1.1 0.12 12.7 1.1 1.1 1 0 0 1 1 1 0 EbsA-like protein zf-RING_UBOX PF13445.6 NODE_69681_length_227_cov_1.776042_g61740_i0forward_frame_2 - 0.00035 20.5 4.1 0.00065 19.7 4.1 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_69681_length_227_cov_1.776042_g61740_i0forward_frame_2 - 0.044 13.7 12.9 0.063 13.2 12.9 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_69681_length_227_cov_1.776042_g61740_i0forward_frame_2 - 0.24 11.7 11.9 0.35 11.2 11.9 1.3 1 0 0 1 1 1 0 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_69681_length_227_cov_1.776042_g61740_i0forward_frame_2 - 0.25 11.2 9.6 0.43 10.5 9.6 1.5 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_69681_length_227_cov_1.776042_g61740_i0forward_frame_2 - 0.44 10.7 8.3 0.94 9.7 8.3 1.7 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING MinC_C PF03775.16 NODE_69677_length_227_cov_1.807292_g61736_i0forward_frame_3 - 2.9e-06 27.2 0.0 3.9e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Septum formation inhibitor MinC, C-terminal domain Exo_endo_phos PF03372.23 NODE_69676_length_227_cov_1.812500_g61735_i0forward_frame_2 - 8.7e-06 25.4 0.0 9.1e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_69676_length_227_cov_1.812500_g61735_i0forward_frame_2 - 0.051 13.4 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Zn_ribbon_recom PF13408.6 NODE_69673_length_227_cov_1.822917_g61732_i0forward_frame_3 - 0.54 10.8 7.8 0.76 10.3 7.8 1.2 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain Pkinase PF00069.25 NODE_69672_length_227_cov_1.822917_g61731_i0reverse_frame_2 - 1.7e-06 27.6 0.0 1.7e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69672_length_227_cov_1.822917_g61731_i0reverse_frame_2 - 0.008 15.5 0.0 0.0087 15.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2054 PF10218.9 NODE_69671_length_227_cov_1.828125_g61730_i0forward_frame_3 - 0.019 15.0 1.0 0.023 14.8 1.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) BPD_transp_1 PF00528.22 NODE_69670_length_227_cov_1.833333_g61729_i0reverse_frame_2 - 1.3e-13 51.1 0.3 1.3e-13 51.1 0.3 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DUF4485 PF14846.6 NODE_69669_length_227_cov_1.843750_g61728_i0reverse_frame_3 - 0.075 13.1 0.3 0.075 13.1 0.3 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4485) Pox_polyA_pol PF03296.13 NODE_69669_length_227_cov_1.843750_g61728_i0forward_frame_3 - 0.029 14.2 0.8 0.037 13.9 0.9 1.4 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain Hist_deacetyl PF00850.19 NODE_69668_length_227_cov_1.854167_g61727_i0reverse_frame_3 - 2.1e-06 27.4 0.0 2.1e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Radical_SAM PF04055.21 NODE_69666_length_227_cov_1.869792_g61725_i0reverse_frame_3 - 0.1 13.0 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Radical SAM superfamily Ank_5 PF13857.6 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 1.5e-07 31.5 0.0 2.7e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 1.3e-06 28.2 0.0 3.7e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 1.6e-05 25.1 0.0 3.4e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeat Ank_4 PF13637.6 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 0.00035 21.1 0.1 0.23 12.1 0.0 2.6 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_69665_length_227_cov_1.875000_g61724_i0reverse_frame_2 - 0.00082 19.9 0.0 0.003 18.1 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) MAP PF03642.13 NODE_69660_length_227_cov_1.979167_g61719_i0reverse_frame_2 - 0.041 14.2 0.1 0.05 13.9 0.1 1.1 1 0 0 1 1 1 0 MAP domain Cas9_Topo PF17894.1 NODE_69660_length_227_cov_1.979167_g61719_i0forward_frame_2 - 0.11 12.6 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Topo homolgy domain in CRISPR-associated endonuclease Cas9 TerY_C PF15616.6 NODE_69655_length_227_cov_2.057292_g61714_i0reverse_frame_3 - 0.045 13.8 0.4 0.049 13.7 0.4 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain Imm_superinfect PF14373.6 NODE_69654_length_227_cov_2.062500_g61713_i0reverse_frame_2 - 3.1 7.8 9.4 0.73 9.8 6.0 1.7 1 1 0 1 1 1 0 Superinfection immunity protein Wzy_C PF04932.15 NODE_69649_length_227_cov_2.083333_g61708_i0forward_frame_3 - 4.3 7.0 6.3 4.4 6.9 6.3 1.0 1 0 0 1 1 1 0 O-Antigen ligase Sterol-sensing PF12349.8 NODE_69649_length_227_cov_2.083333_g61708_i0forward_frame_2 - 0.018 14.9 0.8 0.022 14.6 0.8 1.1 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation Ras PF00071.22 NODE_69644_length_227_cov_2.171875_g61703_i0forward_frame_3 - 0.0001 21.9 0.1 0.00012 21.8 0.1 1.1 1 0 0 1 1 1 1 Ras family Pkinase PF00069.25 NODE_69643_length_227_cov_2.177083_g61702_i0reverse_frame_3 - 5.4e-16 58.7 0.7 5.7e-16 58.7 0.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_69643_length_227_cov_2.177083_g61702_i0reverse_frame_3 - 1.9e-07 30.7 0.2 1.9e-07 30.6 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Keratin_B2_2 PF13885.6 NODE_69642_length_227_cov_2.182292_g61701_i0forward_frame_3 - 3.3 7.8 15.0 8 6.5 15.0 1.7 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Cupredoxin_1 PF13473.6 NODE_69641_length_227_cov_2.187500_g61700_i0reverse_frame_3 - 0.0094 16.1 0.0 0.011 15.9 0.0 1.2 1 0 0 1 1 1 1 Cupredoxin-like domain hGDE_N PF14699.6 NODE_69641_length_227_cov_2.187500_g61700_i0reverse_frame_3 - 0.031 14.4 0.1 0.035 14.2 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain from the human glycogen debranching enzyme AlcCBM31 PF11606.8 NODE_69641_length_227_cov_2.187500_g61700_i0forward_frame_2 - 0.17 12.1 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Family 31 carbohydrate binding protein LZ3wCH PF18517.1 NODE_69638_length_227_cov_2.239583_g61697_i0forward_frame_3 - 0.0059 16.7 0.2 0.0076 16.3 0.2 1.3 1 0 0 1 1 1 1 Leucine zipper with capping helix domain DUF5344 PF17279.2 NODE_69638_length_227_cov_2.239583_g61697_i0forward_frame_3 - 0.013 16.1 0.8 0.022 15.3 0.4 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5344) TssC PF17541.2 NODE_69638_length_227_cov_2.239583_g61697_i0forward_frame_3 - 0.073 11.9 0.4 0.08 11.8 0.4 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssC, VipB Vac_Fusion PF02346.16 NODE_69638_length_227_cov_2.239583_g61697_i0forward_frame_3 - 0.092 12.4 0.4 1.1 9.0 0.1 2.2 1 1 1 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 DUF1474 PF07342.11 NODE_69638_length_227_cov_2.239583_g61697_i0forward_frame_3 - 0.097 13.2 0.5 0.18 12.4 0.3 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1474) KGG PF10685.9 NODE_69625_length_227_cov_2.541667_g61684_i0reverse_frame_3 - 0.16 12.3 0.1 0.3 11.4 0.1 1.5 1 0 0 1 1 1 0 Stress-induced bacterial acidophilic repeat motif Molybdop_Fe4S4 PF04879.16 NODE_69623_length_227_cov_2.635417_g61682_i0reverse_frame_3 - 1.2 9.1 4.9 0.47 10.5 0.5 2.0 2 0 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain NPR3 PF03666.13 NODE_69616_length_227_cov_2.744792_g61675_i0forward_frame_3 - 0.82 8.4 12.9 0.84 8.4 12.9 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Mucin PF01456.17 NODE_69616_length_227_cov_2.744792_g61675_i0forward_frame_3 - 2.4 8.1 47.1 2.8 7.9 47.1 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein MGC-24 PF05283.11 NODE_69616_length_227_cov_2.744792_g61675_i0forward_frame_3 - 8.5 6.8 28.0 10 6.6 28.0 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Nodulin_late PF07127.11 NODE_69612_length_227_cov_2.890625_g61671_i0forward_frame_3 - 0.022 15.1 3.8 0.03 14.7 3.8 1.2 1 0 0 1 1 1 0 Late nodulin protein zinc_ribbon_12 PF11331.8 NODE_69608_length_227_cov_2.984375_g61667_i0reverse_frame_3 - 0.19 11.6 3.1 2.1 8.2 0.2 2.3 2 0 0 2 2 2 0 Probable zinc-ribbon domain DUF4510 PF14971.6 NODE_69608_length_227_cov_2.984375_g61667_i0forward_frame_2 - 0.051 13.9 0.1 0.052 13.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4510) RLAN PF14401.6 NODE_69607_length_227_cov_3.000000_g61666_i0reverse_frame_2 - 0.02 14.5 0.4 0.022 14.4 0.4 1.1 1 0 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain PHM7_cyt PF14703.6 NODE_69607_length_227_cov_3.000000_g61666_i0reverse_frame_2 - 0.034 14.4 0.7 0.036 14.3 0.7 1.0 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter RNB PF00773.19 NODE_69606_length_227_cov_3.041667_g61665_i0forward_frame_3 - 8.3e-09 35.2 0.0 8.5e-09 35.2 0.0 1.0 1 0 0 1 1 1 1 RNB domain JAMP PF05571.12 NODE_69606_length_227_cov_3.041667_g61665_i0forward_frame_2 - 0.11 12.1 2.1 0.12 12.0 2.1 1.1 1 0 0 1 1 1 0 JNK1/MAPK8-associated membrane protein Bunya_NS-S PF01104.17 NODE_69604_length_227_cov_3.328125_g61663_i0reverse_frame_3 - 0.13 12.1 1.4 0.16 11.8 0.4 1.6 2 0 0 2 2 2 0 Bunyavirus non-structural protein NS-s HTH_Tnp_Tc3_1 PF11427.8 NODE_69603_length_227_cov_3.328125_g61662_i0reverse_frame_3 - 0.082 12.8 0.1 0.12 12.3 0.1 1.4 1 1 0 1 1 1 0 Tc3 transposase UPF0176_N PF17773.1 NODE_69603_length_227_cov_3.328125_g61662_i0reverse_frame_2 - 5.3e-14 52.3 0.0 5.8e-14 52.2 0.0 1.0 1 0 0 1 1 1 1 UPF0176 acylphosphatase like domain PTS_EIIC PF02378.18 NODE_69602_length_227_cov_3.348958_g61661_i0reverse_frame_3 - 6.5e-06 25.4 0.2 6.9e-06 25.3 0.2 1.0 1 0 0 1 1 1 1 Phosphotransferase system, EIIC tRNA_NucTransf2 PF09249.11 NODE_69602_length_227_cov_3.348958_g61661_i0reverse_frame_2 - 0.023 14.9 0.0 0.024 14.9 0.0 1.2 1 0 0 1 1 1 0 tRNA nucleotidyltransferase, second domain Defensin_beta PF00711.19 NODE_69596_length_227_cov_4.463542_g61655_i0reverse_frame_2 - 0.07 13.2 1.3 0.25 11.4 0.1 2.1 2 0 0 2 2 2 0 Beta defensin YqfD PF06898.11 NODE_69596_length_227_cov_4.463542_g61655_i0reverse_frame_2 - 0.45 9.3 1.5 0.49 9.2 1.5 1.1 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD Toxin_5 PF05294.13 NODE_69596_length_227_cov_4.463542_g61655_i0forward_frame_3 - 0.12 12.8 3.6 0.12 12.8 3.6 1.6 2 0 0 2 2 2 0 Scorpion short toxin Chorismate_synt PF01264.21 NODE_69596_length_227_cov_4.463542_g61655_i0forward_frame_2 - 0.076 11.7 0.0 0.076 11.7 0.0 1.0 1 0 0 1 1 1 0 Chorismate synthase DUF4171 PF13775.6 NODE_69595_length_227_cov_4.593750_g61654_i0forward_frame_3 - 0.032 14.7 3.6 0.034 14.6 3.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4171) SYS1 PF09801.9 NODE_69594_length_227_cov_4.869792_g61653_i0reverse_frame_3 - 0.032 14.4 0.0 0.04 14.1 0.0 1.1 1 0 0 1 1 1 0 Integral membrane protein S linking to the trans Golgi network YojJ PF10372.9 NODE_69593_length_227_cov_4.895833_g61652_i0reverse_frame_3 - 0.061 13.4 0.9 0.16 12.0 0.0 1.9 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus ADAM17_MPD PF16698.5 NODE_69591_length_227_cov_12.359375_g61650_i0forward_frame_3 - 0.014 15.8 0.7 0.023 15.0 0.7 1.4 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 T3SS_ExsE PF18286.1 NODE_69590_length_227_cov_12.739583_g61649_i0reverse_frame_2 - 0.065 13.2 0.0 0.093 12.7 0.0 1.3 1 0 0 1 1 1 0 Type III secretion system ExsE DUF4972 PF16342.5 NODE_69587_length_227_cov_24.312500_g61646_i0reverse_frame_2 - 0.02 14.6 1.1 0.026 14.2 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) RHH_6 PF16762.5 NODE_69587_length_227_cov_24.312500_g61646_i0reverse_frame_2 - 0.11 13.1 1.5 0.13 12.8 0.8 1.5 2 0 0 2 2 2 0 Ribbon-helix-helix domain DUF2393 PF09624.10 NODE_69587_length_227_cov_24.312500_g61646_i0forward_frame_3 - 1.2 9.2 5.2 1.3 9.0 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) DUF1509 PF07420.11 NODE_69586_length_227_cov_26.000000_g61645_i0reverse_frame_3 - 1.7 7.5 6.7 1.8 7.5 6.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) SlyX PF04102.12 NODE_69586_length_227_cov_26.000000_g61645_i0reverse_frame_2 - 0.0068 17.0 1.0 0.0084 16.7 1.0 1.2 1 0 0 1 1 1 1 SlyX XhlA PF10779.9 NODE_69586_length_227_cov_26.000000_g61645_i0reverse_frame_2 - 0.037 14.2 0.3 0.062 13.5 0.3 1.3 1 0 0 1 1 1 0 Haemolysin XhlA Swi5 PF07061.11 NODE_69586_length_227_cov_26.000000_g61645_i0reverse_frame_2 - 0.3 11.2 5.6 0.52 10.4 5.6 1.5 1 1 0 1 1 1 0 Swi5 AbiH PF14253.6 NODE_69584_length_227_cov_30.348958_g61643_i0forward_frame_3 - 0.014 15.3 0.0 0.014 15.2 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage abortive infection AbiH Maf1 PF09174.10 NODE_69582_length_227_cov_30.828125_g61641_i0reverse_frame_3 - 0.031 14.4 0.2 0.032 14.4 0.2 1.2 1 0 0 1 1 1 0 Maf1 regulator Tn7_Tnp_TnsA_C PF08721.11 NODE_69581_length_227_cov_31.583333_g61640_i0forward_frame_2 - 0.034 14.8 0.2 0.048 14.3 0.2 1.3 1 1 0 1 1 1 0 TnsA endonuclease C terminal Totivirus_coat PF05518.11 NODE_69579_length_227_cov_34.791667_g61638_i0reverse_frame_3 - 3.7 5.5 6.1 4.2 5.3 6.1 1.0 1 0 0 1 1 1 0 Totivirus coat protein Flagellin_N PF00669.20 NODE_69578_length_227_cov_35.859375_g61637_i0reverse_frame_3 - 0.043 13.9 0.2 0.054 13.6 0.2 1.2 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region DNA_pol_phi PF04931.13 NODE_69578_length_227_cov_35.859375_g61637_i0reverse_frame_3 - 0.9 7.6 12.2 0.98 7.4 12.2 1.0 1 0 0 1 1 1 0 DNA polymerase phi Drc1-Sld2 PF11719.8 NODE_69578_length_227_cov_35.859375_g61637_i0reverse_frame_3 - 2 7.9 11.1 2.1 7.8 11.1 1.0 1 0 0 1 1 1 0 DNA replication and checkpoint protein Gar1 PF04410.14 NODE_69578_length_227_cov_35.859375_g61637_i0reverse_frame_3 - 6.3 6.5 8.8 11 5.8 8.8 1.6 1 1 0 1 1 1 0 Gar1/Naf1 RNA binding region TT_ORF1 PF02956.14 NODE_69578_length_227_cov_35.859375_g61637_i0reverse_frame_2 - 8.7 4.9 13.8 8.6 4.9 13.8 1.0 1 0 0 1 1 1 0 TT viral orf 1 SSFA2_C PF14723.6 NODE_69578_length_227_cov_35.859375_g61637_i0forward_frame_2 - 2.7 7.9 4.8 2.9 7.8 4.8 1.1 1 0 0 1 1 1 0 Sperm-specific antigen 2 C-terminus DUF5023 PF16426.5 NODE_69577_length_227_cov_36.390625_g61636_i0reverse_frame_3 - 0.056 13.1 0.0 0.062 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5023) DUF3973 PF13119.6 NODE_69577_length_227_cov_36.390625_g61636_i0forward_frame_2 - 0.03 14.4 0.3 0.047 13.8 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) DUF4979 PF16351.5 NODE_69576_length_227_cov_37.411458_g61635_i0reverse_frame_2 - 0.027 14.7 0.0 0.029 14.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4979) DUF3450 PF11932.8 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.00024 20.5 1.1 0.0003 20.2 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) RNA_pol_A_CTD PF03118.15 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.00052 19.7 1.0 0.00067 19.4 1.0 1.2 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain DUF2570 PF10828.8 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.00092 19.0 2.2 0.00098 18.9 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2570) DUF641 PF04859.12 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.0013 19.0 1.1 0.0016 18.8 1.1 1.1 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) ATG16 PF08614.11 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.0048 17.2 0.6 0.0056 16.9 0.6 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) Spc7 PF08317.11 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.0052 15.7 5.2 0.0054 15.7 5.2 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein APG6_N PF17675.1 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.016 15.7 2.6 0.018 15.5 2.6 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Cdh1_DBD_1 PF18196.1 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.028 14.7 3.1 0.032 14.6 3.1 1.0 1 0 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 DUF16 PF01519.16 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.043 14.3 4.8 0.049 14.1 4.8 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 DUF1664 PF07889.12 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.044 13.8 1.0 0.066 13.3 0.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) TcdB_N PF12918.7 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.067 13.5 5.4 0.069 13.4 4.7 1.4 1 1 0 1 1 1 0 TcdB toxin N-terminal helical domain DivIC PF04977.15 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 0.1 12.4 2.6 0.17 11.7 2.2 1.6 1 1 1 2 2 2 0 Septum formation initiator Tnp_22_trimer PF17489.2 NODE_69571_length_227_cov_39.375000_g61630_i0forward_frame_2 - 5.1 7.1 9.2 0.51 10.3 0.6 2.1 2 0 0 2 2 2 0 L1 transposable element trimerization domain TM231 PF10149.9 NODE_69569_length_227_cov_40.645833_g61628_i0reverse_frame_3 - 0.27 10.5 2.3 0.38 10.0 2.3 1.2 1 0 0 1 1 1 0 Transmembrane protein 231 HAP2-GCS1 PF10699.9 NODE_69568_length_227_cov_42.838542_g61627_i0forward_frame_3 - 0.046 13.7 1.7 0.07 13.1 1.7 1.3 1 0 0 1 1 1 0 Male gamete fusion factor 4HPAD_g_N PF18671.1 NODE_69567_length_227_cov_45.442708_g61626_i0reverse_frame_2 - 0.035 13.8 0.2 0.057 13.1 0.2 1.3 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal Pox_P21 PF05313.12 NODE_69567_length_227_cov_45.442708_g61626_i0forward_frame_3 - 0.0057 16.3 0.8 0.0065 16.1 0.8 1.0 1 0 0 1 1 1 1 Poxvirus P21 membrane protein RNA_pol_Rpb1_5 PF04998.17 NODE_69566_length_227_cov_47.390625_g61625_i0reverse_frame_2 - 0.061 12.7 0.0 0.074 12.5 0.0 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 HOOK PF05622.12 NODE_69566_length_227_cov_47.390625_g61625_i0forward_frame_3 - 0.13 10.3 0.1 0.14 10.2 0.1 1.0 1 0 0 1 1 1 0 HOOK protein zf-LITAF-like PF10601.9 NODE_69566_length_227_cov_47.390625_g61625_i0forward_frame_2 - 0.0042 17.3 0.7 0.0054 17.0 0.7 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain OSK PF17182.4 NODE_69564_length_227_cov_48.239583_g61623_i0reverse_frame_3 - 0.018 14.3 0.2 0.019 14.2 0.2 1.0 1 0 0 1 1 1 0 OSK domain EVI2A PF05399.11 NODE_69564_length_227_cov_48.239583_g61623_i0forward_frame_2 - 0.19 11.3 0.5 0.22 11.1 0.5 1.1 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) eIF_4EBP PF05456.11 NODE_69561_length_227_cov_49.812500_g61620_i0reverse_frame_2 - 0.016 15.2 0.3 0.018 15.0 0.3 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) ETRAMP PF09716.10 NODE_69557_length_227_cov_52.145833_g61616_i0forward_frame_2 - 4.9 7.3 6.3 9.5 6.4 6.3 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) zf-HC5HC2H PF13771.6 NODE_69555_length_227_cov_52.895833_g61614_i0forward_frame_2 - 0.01 16.1 2.0 0.01 16.1 2.0 1.1 1 0 0 1 1 1 0 PHD-like zinc-binding domain Vault_4 PF17796.1 NODE_69551_length_227_cov_56.005208_g61610_i0reverse_frame_3 - 0.0011 19.0 0.0 0.0014 18.6 0.0 1.1 1 0 0 1 1 1 1 Major Vault Protein repeat domain Histone_H2A_C PF16211.5 NODE_69551_length_227_cov_56.005208_g61610_i0reverse_frame_2 - 1.9 8.3 4.9 4.2 7.2 4.9 1.6 1 0 0 1 1 1 0 C-terminus of histone H2A EpsG PF14897.6 NODE_69550_length_227_cov_56.515625_g61609_i0reverse_frame_2 - 0.15 11.4 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 EpsG family MTP18 PF10558.9 NODE_69547_length_227_cov_59.760417_g61606_i0reverse_frame_2 - 0.11 12.4 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial 18 KDa protein (MTP18) KN_motif PF12075.8 NODE_69545_length_227_cov_63.984375_g61604_i0forward_frame_3 - 0.066 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 KN motif EBP PF05241.12 NODE_69544_length_227_cov_65.125000_g61603_i0reverse_frame_3 - 0.07 12.6 4.7 0.041 13.3 3.4 1.3 1 1 0 1 1 1 0 Emopamil binding protein Ran_BP1 PF00638.18 NODE_69543_length_227_cov_65.536458_g61602_i0forward_frame_3 - 0.087 13.1 0.0 0.096 13.0 0.0 1.0 1 0 0 1 1 1 0 RanBP1 domain zf-SAP30 PF13866.6 NODE_69541_length_227_cov_65.640625_g61600_i0reverse_frame_2 - 0.096 12.8 4.7 2.5 8.3 0.1 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger Tcp10_C PF07202.13 NODE_69540_length_227_cov_69.020833_g61599_i0forward_frame_2 - 2.6e-09 37.3 2.3 2.6e-09 37.3 2.3 1.1 1 0 0 1 1 1 1 T-complex protein 10 C-terminus DUF5421 PF17458.2 NODE_69534_length_227_cov_77.161458_g61593_i0reverse_frame_2 - 0.081 12.3 0.0 0.082 12.3 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5421) Sensor_TM1 PF13755.6 NODE_69534_length_227_cov_77.161458_g61593_i0forward_frame_3 - 0.66 9.7 4.3 1 9.1 4.3 1.4 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain DUF4501 PF14946.6 NODE_69534_length_227_cov_77.161458_g61593_i0forward_frame_3 - 0.71 9.9 2.6 0.84 9.7 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Lamprin PF06403.11 NODE_69532_length_227_cov_83.468750_g61591_i0forward_frame_3 - 0.84 9.6 7.9 5 7.1 6.6 1.9 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_69532_length_227_cov_83.468750_g61591_i0forward_frame_2 - 0.012 15.5 13.0 0.029 14.3 13.0 1.6 1 1 0 1 1 1 0 Lamprin NatB_MDM20 PF09797.9 NODE_69531_length_227_cov_85.104167_g61590_i0forward_frame_3 - 0.014 14.4 0.7 0.016 14.2 0.7 1.0 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit DUF4061 PF13270.6 NODE_69531_length_227_cov_85.104167_g61590_i0forward_frame_3 - 0.052 13.9 0.2 0.064 13.6 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4061) Rad4 PF03835.15 NODE_69524_length_227_cov_117.703125_g61583_i0reverse_frame_2 - 0.0041 16.8 0.0 0.0053 16.4 0.0 1.2 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain Phe_ZIP PF08916.11 NODE_69524_length_227_cov_117.703125_g61583_i0reverse_frame_2 - 0.093 13.5 0.6 0.27 12.0 0.1 1.8 2 0 0 2 2 2 0 Phenylalanine zipper DnaJ PF00226.31 NODE_69521_length_227_cov_126.875000_g61580_i0forward_frame_3 - 0.17 12.0 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 DnaJ domain DUF1298 PF06974.13 NODE_69520_length_227_cov_127.328125_g61579_i0forward_frame_3 - 1e-05 25.5 0.0 1.3e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) YwhD PF08741.10 NODE_69520_length_227_cov_127.328125_g61579_i0forward_frame_3 - 0.063 13.0 0.1 0.071 12.8 0.1 1.1 1 0 0 1 1 1 0 YwhD family UPF0147 PF03685.13 NODE_69518_length_227_cov_146.609375_g61577_i0reverse_frame_2 - 0.071 13.2 0.0 0.095 12.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) CobW_C PF07683.14 NODE_69516_length_227_cov_179.692708_g61575_i0reverse_frame_3 - 0.00092 19.1 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain PRP9_N PF16958.5 NODE_69513_length_227_cov_209.786458_g61572_i0reverse_frame_3 - 0.00058 19.9 3.4 0.00061 19.8 3.4 1.1 1 0 0 1 1 1 1 Pre-mRNA-splicing factor PRP9 N-terminus DUF2325 PF10087.9 NODE_69513_length_227_cov_209.786458_g61572_i0reverse_frame_3 - 0.14 12.3 6.0 0.049 13.8 2.8 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) p31comet PF06581.12 NODE_69510_length_227_cov_247.729167_g61569_i0forward_frame_2 - 0.15 11.2 1.7 0.15 11.2 1.7 1.0 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding E3_UbLigase_EDD PF11547.8 NODE_69509_length_227_cov_253.838542_g61568_i0forward_frame_3 - 0.1 12.3 0.6 0.14 11.8 0.6 1.2 1 0 0 1 1 1 0 E3 ubiquitin ligase EDD DSL PF01414.19 NODE_69505_length_227_cov_621.046875_g61564_i0reverse_frame_3 - 0.0045 17.2 0.7 0.0045 17.2 0.7 1.5 2 0 0 2 2 2 1 Delta serrate ligand HU-CCDC81_bac_1 PF18174.1 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_3 - 0.043 13.7 0.4 59 3.6 0.0 3.0 3 0 0 3 3 3 0 CCDC81-like prokaryotic HU domain 1 OGFr_III PF04680.13 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_3 - 2.6 8.8 6.2 1.2e+02 3.5 0.1 3.6 4 0 0 4 4 4 0 Opioid growth factor receptor repeat GSu_C4xC__C2xCH PF09698.10 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_2 - 1.8 9.4 15.7 9.1 7.2 0.2 3.6 4 0 0 4 4 4 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) zf-TAZ PF02135.16 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_2 - 1.9 9.0 8.3 2.9 8.4 0.8 2.0 1 1 0 2 2 2 0 TAZ zinc finger DUF1376 PF07120.11 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_2 - 2 8.8 4.8 21 5.5 0.9 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1376) RNA_POL_M_15KD PF02150.16 NODE_69504_length_227_cov_680.052083_g61563_i0reverse_frame_2 - 5.2 7.0 11.8 22 5.0 0.1 4.0 4 0 0 4 4 4 0 RNA polymerases M/15 Kd subunit KH_4 PF13083.6 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_3 - 0.011 15.6 2.3 4.7 7.2 0.1 3.0 3 0 0 3 3 3 0 KH domain A1_Propeptide PF07966.12 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_3 - 0.088 12.7 0.0 1.2e+02 2.6 0.0 3.7 4 0 0 4 4 4 0 A1 Propeptide GvpH PF05455.11 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_3 - 0.11 12.5 0.7 32 4.5 0.0 2.8 1 1 2 3 3 3 0 GvpH lci PF12197.8 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_2 - 0.22 11.4 7.9 5 7.0 0.1 3.8 4 0 0 4 4 4 0 Bacillus cereus group antimicrobial protein DUF1902 PF08972.11 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_2 - 2.2 8.4 3.6 57 3.8 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1902) DOG1 PF14144.6 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_2 - 2.4 8.4 5.1 78 3.6 0.1 3.0 2 1 1 3 3 3 0 Seed dormancy control Herpeto_peptide PF14409.6 NODE_69504_length_227_cov_680.052083_g61563_i0forward_frame_2 - 2.6 8.3 21.3 5.1 7.4 1.9 3.1 1 1 2 3 3 3 0 Ribosomally synthesized peptide in Herpetosiphon # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks359.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks359.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks359.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks359.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF229 PF02995.17 ORF27480 - 9e-30 103.7 10.5 2.1e-28 99.2 10.5 2.6 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF27480 - 1.1e-06 28.2 2.9 3.5e-06 26.7 2.8 1.5 1 1 0 1 1 1 1 Sulfatase DUF3232 PF11554.8 ORF27480 - 0.033 14.6 0.2 0.063 13.7 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) FHA PF00498.26 ORF2635 - 3.4e-08 33.7 0.1 1.1e-07 32.1 0.1 1.9 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF2635 - 3.6e-05 24.0 0.0 0.00011 22.4 0.0 1.8 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FlgI PF02119.16 ORF2635 - 0.25 10.3 3.0 0.33 9.8 0.2 2.2 1 1 0 2 2 2 0 Flagellar P-ring protein DUF229 PF02995.17 ORF26175 - 9e-30 103.7 10.5 2.1e-28 99.2 10.5 2.6 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF26175 - 1.1e-06 28.2 2.9 3.5e-06 26.7 2.8 1.5 1 1 0 1 1 1 1 Sulfatase DUF3232 PF11554.8 ORF26175 - 0.033 14.6 0.2 0.063 13.7 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) Dickkopf_N PF04706.12 ORF26112 - 6.3e-05 23.4 6.6 6.3e-05 23.4 6.6 4.0 2 1 0 2 2 2 1 Dickkopf N-terminal cysteine-rich region Ribosomal_S2 PF00318.20 ORF146453 - 6.2e-93 310.0 0.0 7.6e-93 309.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S2 Rotamase PF00639.21 ORF141330 - 2.2e-08 35.0 0.0 8.1e-08 33.1 0.0 2.0 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF141330 - 2.5e-06 28.0 0.0 6.7e-05 23.4 0.0 2.2 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF141330 - 0.00054 20.8 0.2 0.0013 19.5 0.0 1.8 2 0 0 2 2 2 1 PPIC-type PPIASE domain Ion_trans_2 PF07885.16 ORF13631 - 3.2e-13 49.5 8.0 3.2e-13 49.5 8.0 2.6 3 0 0 3 3 3 1 Ion channel Lig_chan PF00060.26 ORF13631 - 0.0074 16.1 2.6 0.0074 16.1 2.6 2.1 1 1 1 2 2 2 1 Ligand-gated ion channel Ion_trans PF00520.31 ORF13631 - 3.3 6.9 22.6 42 3.2 22.6 2.2 1 1 0 1 1 1 0 Ion transport protein Transp_cyt_pur PF02133.15 ORF13389 - 5.7e-14 51.7 43.4 7.6e-14 51.3 43.4 1.2 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin EF-hand_6 PF13405.6 ORF132071 - 4.8e-05 23.0 0.2 0.00017 21.2 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF132071 - 0.00015 21.1 1.0 0.00047 19.5 1.0 1.9 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF132071 - 0.0026 17.6 0.6 0.0074 16.1 0.6 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF132071 - 0.0037 17.7 0.3 0.009 16.4 0.3 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF132071 - 0.37 10.4 1.3 0.73 9.4 1.3 1.5 1 0 0 1 1 1 0 EF hand MFS_1 PF07690.16 ORF128472 - 6e-22 78.0 60.9 3.4e-17 62.4 24.6 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF128472 - 0.002 17.1 34.9 0.2 10.5 13.4 3.2 2 1 1 3 3 3 3 Sugar (and other) transporter DUF2207 PF09972.9 ORF122623 - 0.022 13.5 0.0 0.022 13.5 0.0 1.8 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) EcoRI_methylase PF13651.6 ORF122623 - 0.18 11.0 0.2 0.29 10.3 0.2 1.2 1 0 0 1 1 1 0 Adenine-specific methyltransferase EcoRI Ank_2 PF12796.7 ORF119497 - 6.6e-21 74.7 0.0 1.2e-10 41.8 0.0 3.4 3 1 1 4 4 4 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF119497 - 1.7e-16 60.4 0.4 0.00035 21.1 0.0 5.3 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF119497 - 5.7e-13 48.8 0.3 0.0048 17.2 0.1 4.9 4 2 1 5 5 5 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF119497 - 4.4e-09 35.9 0.6 0.0045 17.4 0.0 5.7 5 1 1 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF119497 - 2.3e-08 34.1 3.3 0.54 10.8 0.0 4.8 4 2 1 5 5 5 3 Ankyrin repeat p31comet PF06581.12 ORF119497 - 0.18 11.0 0.8 1.6 7.8 0.0 2.2 2 0 0 2 2 2 0 Mad1 and Cdc20-bound-Mad2 binding Cyclin_N PF00134.23 ORF118684 - 0.0044 16.8 4.5 0.028 14.2 0.1 3.3 3 1 0 3 3 3 1 Cyclin, N-terminal domain FidL_like PF15941.5 ORF118684 - 1.7 9.2 5.5 7.5 7.1 0.2 3.4 3 1 0 3 3 3 0 FidL-like putative membrane protein PMG PF05287.12 NODE_13255_length_1217_cov_229.398477_g1699_i2forward_frame_1 - 0.0018 18.4 8.1 0.39 10.7 2.1 2.7 1 1 2 3 3 3 3 PMG protein Glyoxalase PF00903.25 ORF98190 - 2.2e-35 121.6 0.0 2.5e-18 66.5 0.0 2.5 2 1 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 ORF98190 - 2e-11 44.1 0.1 0.00085 19.6 0.1 3.9 2 2 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 ORF98190 - 0.00066 20.4 0.0 0.28 12.0 0.0 3.5 2 2 0 2 2 2 1 Glyoxalase-like domain CppA_N PF14506.6 ORF98190 - 0.0053 16.8 0.0 0.67 10.0 0.0 2.3 2 0 0 2 2 2 2 CppA N-terminal Glyoxalase_3 PF13468.6 ORF98190 - 0.18 11.9 0.0 0.95 9.6 0.0 2.1 2 0 0 2 2 2 0 Glyoxalase-like domain Myb_DNA-binding PF00249.31 ORF82894 - 1.4e-13 50.8 0.4 2.6e-13 49.9 0.4 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF82894 - 0.00022 21.4 0.7 0.0011 19.2 0.3 2.4 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF82894 - 0.54 10.2 8.2 0.034 14.0 1.7 2.5 2 1 0 2 2 2 0 Myb DNA-binding like Tombus_movement PF05318.12 ORF82894 - 4.8 8.1 9.5 0.69 10.8 4.2 2.3 2 0 0 2 2 2 0 Tombusvirus movement protein EB PF01683.18 ORF8076 - 0.044 14.1 25.9 0.21 11.9 6.5 3.9 2 1 0 2 2 2 0 EB module MFS_1 PF07690.16 ORF78382 - 2.2e-22 79.5 25.8 3.3e-22 78.9 25.8 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF5423 PF17461.2 ORF78382 - 5.7 5.7 5.1 2.9 6.7 0.8 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5423) 2OG-FeII_Oxy PF03171.20 ORF78334 - 2.1e-12 47.4 0.0 3.9e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DIOX_N PF14226.6 ORF78334 - 0.0033 18.2 0.0 0.0063 17.3 0.0 1.4 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal GTP_cyclohydro2 PF00925.20 ORF67259 - 1.4e-53 180.8 0.0 2.3e-53 180.1 0.0 1.2 1 0 0 1 1 1 1 GTP cyclohydrolase II DMRL_synthase PF00885.19 ORF67259 - 3.4e-30 104.7 0.0 5.4e-30 104.1 0.0 1.3 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Octopine_DH PF02317.17 ORF59065 - 1e-34 119.8 0.0 1.4e-34 119.4 0.0 1.2 1 0 0 1 1 1 1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Pkinase PF00069.25 ORF57117 - 1.3e-64 218.1 0.0 1.8e-64 217.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57117 - 8.5e-35 120.3 0.0 1.1e-34 119.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF57117 - 7.4e-05 22.2 0.0 0.00011 21.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF57117 - 0.056 12.4 0.0 0.085 11.8 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain CDC45 PF02724.14 ORF57117 - 6.8 4.9 7.9 7.8 4.6 7.9 1.1 1 0 0 1 1 1 0 CDC45-like protein WH1 PF00568.23 ORF56162 - 1.9e-09 37.4 1.7 6.5e-08 32.5 0.4 2.7 2 0 0 2 2 2 1 WH1 domain Totivirus_coat PF05518.11 ORF56162 - 0.37 8.8 1.3 0.49 8.4 1.3 1.1 1 0 0 1 1 1 0 Totivirus coat protein PBD PF00786.28 ORF56162 - 0.77 10.2 0.0 0.77 10.2 0.0 3.1 3 1 1 4 4 4 0 P21-Rho-binding domain Pyr_redox_2 PF07992.14 ORF40910 - 1.4e-51 175.4 1.0 2.4e-51 174.7 1.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 ORF40910 - 8.9e-29 100.0 0.1 2.5e-28 98.5 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 ORF40910 - 2.4e-10 40.2 0.1 3.5e-10 39.6 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF40910 - 9.2e-10 39.0 0.7 3.1e-09 37.3 0.7 1.9 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF40910 - 0.022 13.5 0.0 4.3 5.9 0.0 2.2 2 0 0 2 2 2 0 HI0933-like protein Bcl-2_3 PF15286.6 ORF40910 - 0.066 13.9 0.1 0.28 11.9 0.0 2.0 2 0 0 2 2 2 0 Apoptosis regulator M11, B cell 2 leukaemia/lymphoma like BTHB PF18410.1 ORF40910 - 0.19 11.6 0.3 5.4 6.9 0.0 2.9 3 0 0 3 3 3 0 Basic tilted helix bundle domain CAMSAP_CH PF11971.8 ORF34627 - 0.15 11.9 2.1 0.66 9.9 0.8 2.4 1 1 1 2 2 2 0 CAMSAP CH domain DUF2628 PF10947.8 ORF34627 - 3.6 8.0 10.0 3.9 7.9 6.4 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF2628) zf-RING_2 PF13639.6 ORF23682 - 3.9e-09 36.7 7.6 3.9e-09 36.7 7.6 3.0 3 0 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF23682 - 6.4e-06 25.8 5.1 6.4e-06 25.8 5.1 2.2 2 0 0 2 2 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF23682 - 1.3e-05 25.4 6.3 1.3e-05 25.4 6.3 2.4 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF23682 - 1.5e-05 24.8 7.0 1.5e-05 24.8 7.0 2.7 4 0 0 4 4 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF23682 - 4.5e-05 23.4 3.9 0.00017 21.5 3.9 2.1 1 0 0 1 1 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF23682 - 0.00028 20.4 4.7 0.00028 20.4 4.7 2.6 3 0 0 3 3 3 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF23682 - 0.00071 19.5 6.2 0.00071 19.5 6.2 2.7 3 0 0 3 3 2 1 zinc-RING finger domain FANCL_C PF11793.8 ORF23682 - 0.0019 18.4 4.6 0.0019 18.4 4.6 2.5 2 0 0 2 2 2 1 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 ORF23682 - 0.0027 17.5 7.4 0.0027 17.5 7.4 2.4 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF23682 - 0.0057 16.7 2.1 0.0057 16.7 2.1 2.2 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger TssO PF17561.2 ORF23682 - 0.0062 16.6 0.2 0.0062 16.6 0.2 2.5 2 0 0 2 2 2 1 Type VI secretion system, TssO Prok-RING_1 PF14446.6 ORF23682 - 0.009 15.9 2.3 0.009 15.9 2.3 3.0 3 1 1 4 4 3 1 Prokaryotic RING finger family 1 AC_N PF16214.5 ORF23682 - 0.02 14.0 2.0 0.059 12.5 0.8 1.9 2 0 0 2 2 2 0 Adenylyl cyclase N-terminal extracellular and transmembrane region MpPF26 PF07666.11 ORF23682 - 0.042 14.0 0.6 0.11 12.6 0.6 1.6 1 0 0 1 1 1 0 M penetrans paralogue family 26 Comm PF15957.5 ORF23682 - 0.58 10.5 4.0 1.7 9.0 3.8 2.1 1 1 0 1 1 1 0 Commissureless GWT1 PF06423.12 ORF23682 - 2.1 8.5 9.0 2.1 8.5 2.7 2.4 1 1 1 2 2 2 0 GWT1 DUF3391 PF11871.8 ORF23682 - 5 7.7 5.9 17 5.9 0.4 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) Pkinase PF00069.25 ORF21050 - 7.4e-34 117.3 0.4 7.4e-34 117.3 0.4 2.1 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF21050 - 1.3e-23 83.6 0.0 2.9e-17 62.8 0.0 2.3 1 1 1 2 2 2 2 Protein tyrosine kinase Kdo PF06293.14 ORF21050 - 5.9e-05 22.5 0.2 0.00011 21.7 0.2 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF21050 - 0.0064 15.8 0.0 0.012 15.0 0.0 1.4 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF21050 - 0.019 14.9 0.0 0.03 14.3 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family HV_small_capsid PF17086.5 ORF21050 - 0.13 12.6 0.0 0.13 12.6 0.0 2.2 3 0 0 3 3 3 0 Small capsid protein of Herpesviridae PNISR PF15996.5 ORF21050 - 1.6 8.9 13.8 2.8 8.2 13.8 1.4 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR Presenilin PF01080.17 ORF21050 - 3.6 6.3 7.8 4.8 5.8 7.8 1.3 1 0 0 1 1 1 0 Presenilin PX PF00787.24 ORF15889 - 2.3e-20 72.7 1.7 6.4e-20 71.2 1.7 1.7 1 0 0 1 1 1 1 PX domain Herpes_BLRF2 PF05812.12 ORF15889 - 0.014 15.6 0.1 0.014 15.6 0.1 2.3 3 0 0 3 3 3 0 Herpesvirus BLRF2 protein APG6_N PF17675.1 ORF15889 - 4.1 7.9 15.6 3.5 8.1 6.9 2.6 2 0 0 2 2 2 0 Apg6 coiled-coil region zf-CCCH_4 PF18044.1 ORF133695 - 0.019 14.7 0.2 0.019 14.7 0.2 2.0 2 0 0 2 2 2 0 CCCH-type zinc finger zf_CCCH_4 PF18345.1 ORF133695 - 4.1 7.6 8.7 1 9.5 0.7 3.1 3 0 0 3 3 3 0 Zinc finger domain TAXi_N PF14543.6 ORF133695 - 5 7.3 11.4 0.2 11.8 2.6 2.4 1 1 0 2 2 2 0 Xylanase inhibitor N-terminal 3HCDH_N PF02737.18 ORF130043 - 9.1e-56 188.6 0.1 1.3e-55 188.0 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 ORF130043 - 7.5e-36 122.6 1.3 7.5e-26 90.6 0.1 3.1 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DFP PF04127.15 ORF109100 - 1.9e-73 246.3 3.1 3.4e-73 245.5 0.3 2.1 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 ORF109100 - 2.3e-42 144.4 0.1 3.8e-42 143.7 0.1 1.4 1 0 0 1 1 1 1 Flavoprotein PALP PF00291.25 ORF109100 - 0.078 12.4 1.7 0.099 12.0 0.2 1.9 2 1 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme Glyco_trans_4_4 PF13579.6 ORF109100 - 3 8.3 7.7 5.6 7.4 2.6 2.6 1 1 2 3 3 3 0 Glycosyl transferase 4-like domain PH_5 PF15405.6 NODE_13296_length_1215_cov_1350.239831_g9022_i2forward_frame_1 - 0.072 13.2 0.1 0.15 12.2 0.1 1.4 1 0 0 1 1 1 0 Pleckstrin homology domain Pentapeptide_2 PF01469.18 NODE_13255_length_1217_cov_229.398477_g1699_i2forward_frame_3 - 0.26 11.2 15.6 0.28 11.1 4.8 2.7 1 1 1 2 2 2 0 Pentapeptide repeats (8 copies) zf-RING_2 PF13639.6 ORF98254 - 1.6e-09 37.9 9.5 1.6e-09 37.9 9.5 2.7 2 0 0 2 2 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF98254 - 5.7e-06 26.0 6.7 2e-05 24.2 6.7 2.1 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF98254 - 1.9e-05 24.5 8.5 1.9e-05 24.5 8.5 2.7 3 0 0 3 3 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF98254 - 5.7e-05 23.3 8.5 5.7e-05 23.3 8.5 2.3 2 1 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF98254 - 0.00016 21.5 9.6 0.00016 21.5 9.6 2.8 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF98254 - 0.00019 21.4 5.8 0.00019 21.4 5.8 2.1 2 0 0 2 2 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF98254 - 0.00027 20.5 10.1 0.00027 20.5 10.1 2.3 2 1 1 3 3 3 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF98254 - 0.00028 21.0 7.5 0.00028 21.0 7.5 2.7 3 0 0 3 3 3 1 FANCL C-terminal domain zf-ANAPC11 PF12861.7 ORF98254 - 0.00042 20.3 3.2 0.00042 20.3 3.2 1.8 2 0 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Rad50_zn_hook PF04423.14 ORF98254 - 0.0022 17.8 0.3 0.0051 16.6 0.3 1.5 1 0 0 1 1 1 1 Rad50 zinc hook motif zf-C3HC4_2 PF13923.6 ORF98254 - 0.0042 16.9 8.8 0.0042 16.9 8.8 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 ORF98254 - 0.0067 16.3 4.4 0.0067 16.3 4.4 2.9 2 1 1 3 3 3 1 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 ORF98254 - 0.012 15.5 7.4 0.012 15.5 7.4 2.8 3 0 0 3 3 1 0 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF98254 - 2.4 8.3 15.8 0.1 12.7 8.3 2.6 2 0 0 2 2 2 0 RING-variant domain EamA PF00892.20 ORF90764 - 1.9e-05 24.9 11.9 1.9e-05 24.9 11.9 2.8 2 2 0 2 2 2 1 EamA-like transporter family SLC35F PF06027.12 ORF90764 - 0.001 18.6 3.9 0.001 18.6 3.9 2.0 2 1 0 2 2 2 1 Solute carrier family 35 EmrE PF13536.6 ORF90764 - 0.12 12.0 7.7 0.022 14.4 4.5 1.6 2 1 0 2 2 2 0 Putative multidrug resistance efflux transporter NIP_1 PF08995.10 ORF89655 - 0.043 14.2 0.1 0.15 12.4 0.1 1.9 1 0 0 1 1 1 0 Necrosis inducing protein-1 GAS PF13851.6 ORF8482 - 0.0047 16.3 11.0 0.0047 16.3 11.0 4.0 3 1 1 4 4 4 1 Growth-arrest specific micro-tubule binding DUF4164 PF13747.6 ORF8482 - 0.015 15.6 4.3 0.015 15.6 4.3 3.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4164) DUF883 PF05957.13 ORF8482 - 4.7 7.9 15.0 1.2 9.8 2.2 3.4 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF883) WES_acyltransf PF03007.16 ORF83236 - 3.7e-12 46.6 0.0 5.3e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF83236 - 1e-08 35.3 0.1 1.8e-08 34.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) EF-hand_6 PF13405.6 ORF73510 - 9.5e-18 62.6 7.7 3.8e-05 23.3 0.0 6.3 6 0 0 6 6 6 5 EF-hand domain EF-hand_7 PF13499.6 ORF73510 - 8.7e-17 61.3 7.0 1.4e-06 28.7 0.0 4.0 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF73510 - 3e-15 54.5 7.4 4.1e-05 22.8 0.0 6.1 6 0 0 6 6 6 4 EF hand EF-hand_5 PF13202.6 ORF73510 - 3.1e-06 26.4 3.8 1.4e-05 24.4 0.1 3.1 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF73510 - 3.4e-06 26.8 8.7 0.02 14.7 0.1 4.5 4 1 1 5 5 5 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF73510 - 0.00025 21.3 0.4 0.0098 16.2 0.0 2.6 2 1 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF73510 - 0.001 19.0 8.3 4.7 7.2 0.1 5.2 2 2 4 6 6 6 1 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF73510 - 0.015 15.6 0.6 1.7 9.0 0.0 2.6 2 0 0 2 2 2 0 EF-hand domain Lzipper-MIP1 PF14389.6 ORF73510 - 0.03 14.6 1.3 0.42 11.0 0.2 2.6 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 Cir_Bir_Yir PF06022.11 ORF69905 - 0.0025 17.3 7.5 0.0025 17.3 7.5 1.9 2 0 0 2 2 2 1 Plasmodium variant antigen protein Cir/Yir/Bir zf-HC5HC2H_2 PF13832.6 ORF66758 - 0.0094 16.1 0.0 0.018 15.2 0.0 1.6 1 0 0 1 1 1 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 ORF66758 - 0.05 13.9 0.1 0.14 12.4 0.0 1.7 2 0 0 2 2 2 0 PHD-like zinc-binding domain Ion_trans PF00520.31 ORF58817 - 1.8e-24 86.3 17.6 2.3e-24 86.0 17.6 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF58817 - 0.11 11.2 20.7 0.18 10.4 12.0 2.1 2 0 0 2 2 2 0 Polycystin cation channel HisKA PF00512.25 ORF56423 - 0.0002 21.3 0.0 0.00038 20.4 0.0 1.4 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain DUF223 PF02721.14 ORF56423 - 0.09 13.1 0.5 0.35 11.2 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function DUF223 DUF373 PF04123.13 ORF56423 - 0.39 10.1 2.6 0.59 9.5 2.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF373) TMEM52 PF14979.6 ORF53578 - 0.043 13.7 1.4 0.43 10.5 0.0 2.6 2 0 0 2 2 2 0 Transmembrane 52 PRIMA1 PF16101.5 ORF53578 - 0.1 12.7 0.2 0.1 12.7 0.2 2.2 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 Shisa PF13908.6 ORF53578 - 0.26 11.5 0.9 1.5 9.0 0.2 2.4 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator Flu_M2 PF00599.17 ORF53578 - 0.3 11.2 0.1 0.3 11.2 0.1 3.2 3 0 0 3 3 3 0 Influenza Matrix protein (M2) Ni_hydr_CYTB PF01292.20 ORF53578 - 0.41 10.2 10.2 0.5 10.0 0.3 3.3 2 1 0 2 2 2 0 Prokaryotic cytochrome b561 TRP PF06011.12 ORF53578 - 0.85 8.3 38.5 0.096 11.4 33.3 2.0 2 1 0 2 2 2 0 Transient receptor potential (TRP) ion channel DUF2339 PF10101.9 ORF53578 - 1.5 7.3 7.2 0.69 8.4 2.4 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2339) OAD_gamma PF04277.13 ORF53578 - 8 7.1 0.0 8 7.1 0.0 3.5 4 0 0 4 4 4 0 Oxaloacetate decarboxylase, gamma chain RRM_1 PF00076.22 ORF40383 - 2.9e-39 132.7 0.0 1.7e-16 59.8 0.0 3.2 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF40383 - 7.1e-07 29.3 0.0 0.0073 16.4 0.0 3.5 3 1 0 3 3 3 1 RNA recognition motif RRM_5 PF13893.6 ORF40383 - 2.7e-06 27.0 0.0 0.055 13.1 0.0 3.1 2 1 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF40383 - 7.2e-06 26.0 0.0 0.023 14.7 0.0 2.5 2 0 0 2 2 2 2 RNA binding motif Nup35_RRM_2 PF14605.6 ORF40383 - 0.00023 21.1 0.0 0.2 11.7 0.0 2.6 2 0 0 2 2 2 2 Nup53/35/40-type RNA recognition motif BRAP2 PF07576.12 ORF40383 - 0.024 14.8 0.0 0.81 9.9 0.0 2.4 2 0 0 2 2 2 0 BRCA1-associated protein 2 Nuc_sug_transp PF04142.15 ORF25875 - 7.4e-10 38.5 0.6 1.3e-09 37.7 0.6 1.5 1 1 0 1 1 1 1 Nucleotide-sugar transporter CRT-like PF08627.10 ORF25875 - 1.7e-07 30.5 2.5 2.5e-07 30.0 2.5 1.2 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like PUNUT PF16913.5 ORF25875 - 2.2e-07 30.5 0.4 4.5e-07 29.4 0.4 1.5 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport SLC35F PF06027.12 ORF25875 - 4.8e-07 29.6 3.2 7.8e-07 28.9 3.2 1.3 1 0 0 1 1 1 1 Solute carrier family 35 EamA PF00892.20 ORF25875 - 2.1e-06 28.0 5.4 2.1e-06 28.0 5.4 2.4 2 1 0 2 2 2 1 EamA-like transporter family TPT PF03151.16 ORF25875 - 0.0014 18.1 2.4 0.0014 18.1 2.4 1.8 1 1 0 1 1 1 1 Triose-phosphate Transporter family UAA PF08449.11 ORF25875 - 0.0035 16.6 2.8 0.0055 15.9 2.8 1.2 1 0 0 1 1 1 1 UAA transporter family Cytochrom_B_C PF00032.17 ORF25875 - 0.57 10.5 4.4 0.35 11.2 1.6 2.3 2 1 0 2 2 2 0 Cytochrome b(C-terminal)/b6/petD YnfE PF17452.2 ORF21171 - 0.13 12.5 0.1 0.34 11.2 0.1 1.6 1 0 0 1 1 1 0 Uncharacterized YnfE-like mRNA_decap_C PF16741.5 ORF21171 - 0.31 10.4 1.1 17 4.8 0.1 2.4 1 1 1 2 2 2 0 mRNA-decapping enzyme C-terminus SNARE_assoc PF09335.11 ORF149654 - 2.3e-07 31.3 0.2 2.3e-07 31.3 0.2 2.8 3 0 0 3 3 3 1 SNARE associated Golgi protein Peptidase_M56 PF05569.11 ORF149654 - 0.029 13.6 0.6 0.053 12.7 0.6 1.4 1 0 0 1 1 1 0 BlaR1 peptidase M56 Wzy_C PF04932.15 ORF149654 - 0.048 13.3 0.2 7.1 6.2 0.0 2.8 2 1 0 2 2 2 0 O-Antigen ligase DUF3322 PF11795.8 ORF148542 - 0.041 13.9 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) Aa_trans PF01490.18 ORF147522 - 0.027 13.2 0.4 0.043 12.5 0.4 1.2 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein Ribosomal_S16 PF00886.19 ORF145722 - 0.0097 16.0 0.0 7.6 6.7 0.0 2.4 2 0 0 2 2 2 2 Ribosomal protein S16 AA_permease_2 PF13520.6 ORF145102 - 3.8e-27 95.2 46.5 3.8e-27 95.2 46.5 1.8 1 1 1 2 2 2 1 Amino acid permease AA_permease PF00324.21 ORF145102 - 1.7e-22 79.7 46.2 3.2e-22 78.8 46.2 1.4 1 1 0 1 1 1 1 Amino acid permease DUF5345 PF17280.2 ORF144866 - 0.21 11.6 0.1 0.21 11.6 0.1 3.5 4 0 0 4 4 4 0 Family of unknown function (DUF5345) PHO4 PF01384.20 ORF144866 - 1.3 8.0 3.5 0.86 8.6 1.5 1.6 1 1 1 2 2 2 0 Phosphate transporter family LRR_6 PF13516.6 ORF144780 - 9.7e-11 40.8 4.5 0.00049 19.9 0.2 3.7 4 0 0 4 4 4 2 Leucine Rich repeat LRR_4 PF12799.7 ORF144780 - 0.00019 21.7 1.0 0.0013 19.1 0.8 2.4 2 1 1 3 3 3 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF144780 - 0.0018 18.0 1.2 0.068 13.0 0.9 2.8 2 1 0 2 2 2 1 Leucine rich repeat AMH_N PF04709.12 ORF144780 - 0.12 11.3 1.9 0.13 11.2 0.4 1.7 2 0 0 2 2 2 0 Anti-Mullerian hormone, N terminal region LRR_1 PF00560.33 ORF144780 - 0.58 10.9 6.6 3.3 8.6 0.1 4.0 4 0 0 4 4 4 0 Leucine Rich Repeat zf-RING_2 PF13639.6 ORF141541 - 1.6e-09 37.9 9.5 1.6e-09 37.9 9.5 2.7 2 0 0 2 2 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF141541 - 5.7e-06 26.0 6.7 2e-05 24.2 6.7 2.1 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF141541 - 1.9e-05 24.5 8.5 1.9e-05 24.5 8.5 2.7 3 0 0 3 3 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF141541 - 5.7e-05 23.3 8.5 5.7e-05 23.3 8.5 2.3 2 1 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF141541 - 0.00016 21.5 9.6 0.00016 21.5 9.6 2.8 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF141541 - 0.00019 21.4 5.8 0.00019 21.4 5.8 2.1 2 0 0 2 2 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF141541 - 0.00027 20.5 10.1 0.00027 20.5 10.1 2.3 2 1 1 3 3 3 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF141541 - 0.00028 21.0 7.5 0.00028 21.0 7.5 2.7 3 0 0 3 3 3 1 FANCL C-terminal domain zf-ANAPC11 PF12861.7 ORF141541 - 0.00042 20.3 3.2 0.00042 20.3 3.2 1.8 2 0 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Rad50_zn_hook PF04423.14 ORF141541 - 0.0022 17.8 0.3 0.0051 16.6 0.3 1.5 1 0 0 1 1 1 1 Rad50 zinc hook motif zf-C3HC4_2 PF13923.6 ORF141541 - 0.0042 16.9 8.8 0.0042 16.9 8.8 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 ORF141541 - 0.0067 16.3 4.4 0.0067 16.3 4.4 2.9 2 1 1 3 3 3 1 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 ORF141541 - 0.012 15.5 7.4 0.012 15.5 7.4 2.8 3 0 0 3 3 1 0 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF141541 - 2.4 8.3 15.8 0.1 12.7 8.3 2.6 2 0 0 2 2 2 0 RING-variant domain RINGv PF12906.7 ORF13797 - 6.1e-12 45.5 9.1 1.9e-11 43.9 9.1 1.9 1 1 0 1 1 1 1 RING-variant domain FHA PF00498.26 ORF13797 - 1.1e-10 41.7 3.5 9.9e-10 38.6 0.2 3.3 2 1 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 ORF13797 - 4e-07 30.3 0.4 1.2e-05 25.5 0.0 2.8 3 0 0 3 3 3 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 ORF13797 - 0.00016 21.8 6.1 0.00057 20.0 6.1 2.0 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF13797 - 0.037 14.4 13.0 0.27 11.6 13.0 2.4 1 1 0 1 1 1 0 Ring finger domain PHD PF00628.29 ORF13797 - 0.21 11.5 11.8 0.82 9.6 11.8 2.1 1 1 0 1 1 1 0 PHD-finger Nmad2 PF18753.1 ORF131286 - 0.0092 15.5 1.5 0.02 14.3 1.5 1.6 1 0 0 1 1 1 1 Nucleotide modification associated domain 2 Cys_Met_Meta_PP PF01053.20 ORF1281 - 6.6e-142 472.5 0.0 7.6e-142 472.4 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 ORF1281 - 9.9e-08 31.5 0.0 1.4e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF1281 - 2.1e-07 30.3 0.1 0.00016 20.8 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Met_gamma_lyase PF06838.11 ORF1281 - 0.00012 20.7 0.0 0.00015 20.4 0.0 1.2 1 0 0 1 1 1 1 Methionine gamma-lyase SepSecS PF05889.13 ORF1281 - 0.14 10.8 0.0 0.24 10.0 0.0 1.4 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Beta_elim_lyase PF01212.21 ORF1281 - 0.15 11.4 0.1 0.24 10.6 0.1 1.4 1 1 0 1 1 1 0 Beta-eliminating lyase Peptidase_C26 PF07722.13 ORF115997 - 5.3e-35 121.1 0.0 3.9e-34 118.3 0.0 2.1 2 1 0 2 2 2 1 Peptidase C26 GATase PF00117.28 ORF115997 - 7e-07 29.2 0.0 1.1e-06 28.5 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Abhydrolase_1 PF00561.20 ORF113795 - 6.2e-10 39.2 0.0 1.2e-09 38.2 0.0 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF113795 - 1.2e-09 37.8 0.0 1.8e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 VirJ PF06057.11 ORF113795 - 0.0039 17.1 0.0 0.0075 16.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial virulence protein (VirJ) DUF915 PF06028.11 ORF113795 - 0.0064 15.9 0.0 0.0096 15.3 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF915) DUF726 PF05277.12 ORF113795 - 0.092 11.7 0.0 2.4 7.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF726) DUF900 PF05990.12 ORF113795 - 0.13 11.7 0.0 0.22 11.0 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) zf-HC5HC2H_2 PF13832.6 ORF111060 - 0.0094 16.1 0.0 0.018 15.2 0.0 1.6 1 0 0 1 1 1 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 ORF111060 - 0.05 13.9 0.1 0.14 12.4 0.0 1.7 2 0 0 2 2 2 0 PHD-like zinc-binding domain SbcCD_C PF13558.6 ORF108464 - 1.3e-05 25.3 0.1 0.00011 22.3 0.0 2.3 1 1 1 2 2 2 1 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF108464 - 2.7e-05 23.7 0.1 3.2e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF108464 - 4.6e-05 23.4 0.0 0.00014 21.8 0.0 1.7 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Baculo_PEP_C PF04513.12 ORF108464 - 0.0063 16.6 0.1 0.093 12.8 0.0 2.6 3 0 0 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus AAA_15 PF13175.6 ORF108464 - 0.057 13.1 2.1 0.91 9.2 2.1 2.2 1 1 0 1 1 1 0 AAA ATPase domain DUF4392 PF14336.6 ORF108464 - 0.14 11.5 0.5 0.27 10.6 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4392) AAA_23 PF13476.6 ORF108464 - 0.56 10.7 13.1 0.047 14.2 7.1 2.2 2 0 0 2 2 2 0 AAA domain Rx_N PF18052.1 ORF108464 - 0.89 9.9 8.8 0.29 11.4 3.8 2.5 1 1 1 2 2 2 0 Rx N-terminal domain Exonuc_VII_L PF02601.15 ORF108464 - 1.3 8.5 14.2 1.9 8.0 13.1 1.7 1 1 1 2 2 2 0 Exonuclease VII, large subunit DUF1043 PF06295.12 ORF108464 - 1.4 8.9 6.4 1.4 9.0 4.8 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) Noelin-1 PF12308.8 ORF108464 - 1.7 8.7 5.3 7.4 6.6 0.1 3.3 4 0 0 4 4 4 0 Neurogenesis glycoprotein Spc7 PF08317.11 ORF108464 - 2.1 7.1 21.3 1.6 7.6 6.9 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein OmpH PF03938.14 ORF108464 - 2.2 8.6 18.7 4.9 7.5 3.9 2.7 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) THOC7 PF05615.13 ORF108464 - 2.9 8.2 16.8 0.69 10.2 5.2 2.7 1 1 1 2 2 2 0 Tho complex subunit 7 Csm1_N PF18504.1 ORF108464 - 3.3 8.1 13.6 7.8 6.9 1.7 3.9 1 1 2 3 3 3 0 Csm1 N-terminal domain CorA PF01544.18 ORF108464 - 4.2 6.6 9.0 6.3 6.0 8.2 1.6 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein Cep57_CLD_2 PF14197.6 ORF108464 - 4.7 7.4 16.9 1.1 9.4 7.9 2.7 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 FadA PF09403.10 ORF108464 - 5.6 7.5 15.1 2.6 8.6 8.5 3.3 2 1 1 3 3 3 0 Adhesion protein FadA DUF4094 PF13334.6 ORF108464 - 7 7.2 8.1 8 7.0 3.4 2.9 2 2 1 3 3 3 0 Domain of unknown function (DUF4094) T3SSipB PF16535.5 ORF108464 - 8.3 6.9 12.2 22 5.5 8.0 2.6 1 1 2 3 3 3 0 Type III cell invasion protein SipB FapA PF03961.13 ORF108464 - 8.4 4.9 9.4 8.2 4.9 2.8 1.5 1 1 1 2 2 2 0 Flagellar Assembly Protein A LETM1 PF07766.13 ORF10645 - 1.6e-13 50.7 2.0 1.6e-13 50.7 2.0 2.4 2 1 1 3 3 3 1 LETM1-like protein NUMOD1 PF07453.13 ORF10645 - 0.05 13.9 0.5 0.22 11.8 0.1 2.3 2 0 0 2 2 2 0 NUMOD1 domain OmpH PF03938.14 ORF10645 - 0.41 11.0 10.9 0.084 13.2 2.7 2.8 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) PHD_4 PF16866.5 NODE_13296_length_1215_cov_1350.239831_g9022_i2forward_frame_3 - 0.016 15.3 1.0 0.034 14.2 1.0 1.5 1 0 0 1 1 1 0 PHD-finger Homeodomain PF00046.29 ORF98557 - 0.016 15.0 0.7 0.045 13.6 0.7 1.8 1 0 0 1 1 1 0 Homeodomain zf-RING_2 PF13639.6 ORF96140 - 8.4e-11 42.0 5.6 8.4e-11 42.0 5.6 2.4 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF96140 - 1.2e-08 34.6 5.3 1.2e-08 34.6 5.3 2.3 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF96140 - 2.2e-08 34.2 6.6 7.4e-08 32.6 6.6 1.9 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF96140 - 1.1e-05 25.0 3.4 4.9e-05 23.0 3.4 2.2 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF96140 - 3.7e-05 23.7 1.9 9.9e-05 22.3 1.9 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF96140 - 8e-05 22.4 3.8 8e-05 22.4 3.8 2.1 2 1 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF96140 - 0.00036 20.4 5.1 0.00036 20.4 5.1 2.4 2 1 0 2 2 1 1 zinc-RING finger domain RINGv PF12906.7 ORF96140 - 0.00046 20.3 6.9 0.00095 19.2 6.9 1.5 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4 PF00097.25 ORF96140 - 0.0065 16.3 6.7 0.0065 16.3 6.7 3.2 3 1 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) Ribosomal_S13 PF00416.22 ORF96140 - 0.0098 16.3 0.3 0.02 15.3 0.3 1.5 1 0 0 1 1 1 1 Ribosomal protein S13/S18 zf-ANAPC11 PF12861.7 ORF96140 - 8.1 6.6 13.9 0.11 12.6 5.4 2.2 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Pkinase PF00069.25 ORF85507 - 3.6e-40 138.0 0.1 1e-39 136.5 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85507 - 2.1e-13 50.1 0.2 1.1e-12 47.9 0.0 2.1 2 0 0 2 2 2 1 Protein tyrosine kinase Choline_kinase PF01633.20 ORF85507 - 0.0027 17.3 0.5 0.0027 17.3 0.5 2.7 2 1 1 3 3 3 1 Choline/ethanolamine kinase APH PF01636.23 ORF85507 - 0.0046 16.9 0.0 0.0075 16.2 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF85507 - 0.014 14.7 0.2 0.22 10.9 0.1 2.1 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 ORF85507 - 0.027 14.0 0.0 0.077 12.5 0.0 1.7 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL ECH_2 PF16113.5 ORF84621 - 4.3e-100 335.4 0.0 5e-100 335.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 ORF84621 - 2.1e-23 82.9 0.0 9.8e-21 74.2 0.0 2.1 2 0 0 2 2 2 2 Enoyl-CoA hydratase/isomerase DUF3116 PF11313.8 ORF83243 - 0.11 12.4 0.2 0.28 11.1 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) VirB3 PF05101.13 ORF83243 - 2.9 8.2 6.8 0.24 11.6 1.0 2.0 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein Pkinase PF00069.25 ORF79993 - 5.1e-45 153.9 0.0 7.9e-45 153.3 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF79993 - 4.2e-22 78.7 0.1 5.9e-22 78.2 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_5 PF13202.6 ORF79993 - 6.1e-19 66.6 5.5 6.6e-06 25.4 0.1 4.0 4 0 0 4 4 4 3 EF hand EF-hand_1 PF00036.32 ORF79993 - 3.1e-18 63.9 3.7 0.0001 21.6 0.2 4.3 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF79993 - 1e-16 59.3 3.2 6.7e-05 22.5 0.0 4.3 5 0 0 5 5 5 3 EF-hand domain EF-hand_7 PF13499.6 ORF79993 - 3.5e-16 59.4 7.0 2.6e-09 37.4 0.2 3.4 2 2 1 3 3 3 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF79993 - 3.2e-11 42.9 3.0 0.0023 17.8 0.4 4.6 5 0 0 5 5 5 3 EF-hand domain pair EF-hand_4 PF12763.7 ORF79993 - 1.7e-05 24.7 0.1 0.097 12.6 0.1 3.0 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF79993 - 5.1e-05 23.6 0.0 0.018 15.3 0.0 2.6 1 1 2 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF79993 - 0.0069 16.6 0.0 0.64 10.2 0.0 2.6 3 0 0 3 3 3 1 Dockerin type I domain Pkinase_fungal PF17667.1 ORF79993 - 0.0081 15.0 0.0 0.013 14.3 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Flu_C_NS2 PF03555.14 ORF79993 - 0.1 12.8 0.2 0.36 11.0 0.0 2.0 2 0 0 2 2 2 0 Influenza C non-structural protein (NS2) YrbL-PhoP_reg PF10707.9 ORF79993 - 0.13 11.8 0.0 0.33 10.5 0.0 1.6 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Vesiculo_matrix PF06326.12 ORF79993 - 0.13 12.0 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Vesiculovirus matrix protein Oxysterol_BP PF01237.18 ORF77908 - 4.6e-31 108.0 0.1 6.4e-31 107.5 0.1 1.1 1 0 0 1 1 1 1 Oxysterol-binding protein UDPGT PF00201.18 ORF74338 - 1e-16 60.8 0.0 2.1e-16 59.8 0.0 1.4 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF74338 - 3e-07 30.6 0.0 5.1e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Pkinase PF00069.25 ORF71476 - 3.6e-40 138.0 0.1 1e-39 136.5 0.0 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF71476 - 2.1e-13 50.1 0.2 1.1e-12 47.9 0.0 2.1 2 0 0 2 2 2 1 Protein tyrosine kinase Choline_kinase PF01633.20 ORF71476 - 0.0027 17.3 0.5 0.0027 17.3 0.5 2.7 2 1 1 3 3 3 1 Choline/ethanolamine kinase APH PF01636.23 ORF71476 - 0.0046 16.9 0.0 0.0075 16.2 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF71476 - 0.014 14.7 0.2 0.22 10.9 0.1 2.1 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 ORF71476 - 0.027 14.0 0.0 0.077 12.5 0.0 1.7 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Cation_efflux PF01545.21 ORF67011 - 1.5e-28 99.9 9.8 1.9e-28 99.6 9.8 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 ORF67011 - 1.8e-08 34.4 0.0 3.3e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter tRNA-synt_1d PF00750.19 ORF64076 - 5.6e-66 222.9 0.0 7.1e-66 222.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 ORF64076 - 0.00023 21.7 0.0 0.0005 20.6 0.0 1.6 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF64076 - 0.01 15.2 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain Rotamase_2 PF13145.6 ORF64076 - 0.023 15.6 0.1 1 10.2 0.1 2.1 2 0 0 2 2 2 0 PPIC-type PPIASE domain DUF4298 PF14131.6 ORF64076 - 0.084 12.8 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Lentiviral_Tat PF02998.14 ORF64076 - 6.5 6.9 9.0 0.22 11.6 2.5 2.1 2 0 0 2 2 2 0 Lentiviral Tat protein Abhydrolase_1 PF00561.20 ORF60650 - 8.9e-22 78.0 0.2 6e-21 75.3 0.2 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF60650 - 3.6e-14 53.9 0.0 4.5e-14 53.6 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF60650 - 1.7e-11 43.8 0.0 2.9e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 LIDHydrolase PF10230.9 ORF60650 - 2.2e-05 24.2 0.0 3.3e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Abhydrolase_5 PF12695.7 ORF60650 - 0.0093 15.7 0.0 0.023 14.5 0.0 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_8 PF06259.12 ORF60650 - 0.028 14.1 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase Ndr PF03096.14 ORF60650 - 0.12 11.0 0.0 0.17 10.6 0.0 1.2 1 0 0 1 1 1 0 Ndr family DUF493 PF04359.14 ORF6033 - 0.053 14.1 0.1 7.3 7.2 0.1 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF493) Aldo_ket_red PF00248.21 ORF5996 - 3.1e-41 141.5 0.0 1.9e-39 135.6 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family SbmA_BacA PF05992.12 ORF59492 - 1.3e-126 422.3 5.2 1.5e-126 422.1 5.2 1.0 1 0 0 1 1 1 1 SbmA/BacA-like family ABC_membrane_2 PF06472.15 ORF59492 - 3.2e-14 53.0 2.6 3e-13 49.8 2.6 2.3 1 1 0 1 1 1 1 ABC transporter transmembrane region 2 DUF4257 PF14074.6 ORF55695 - 2.2 8.5 7.6 0.56 10.5 1.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF4257) TAXi_C PF14541.6 ORF49452 - 1.1e-19 70.7 0.0 5e-19 68.6 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Asp PF00026.23 ORF49452 - 1.3e-18 67.5 0.0 1.7e-18 67.1 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease HATPase_c PF02518.26 ORF48190 - 3.7e-22 79.0 0.1 7.4e-22 78.0 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF48190 - 1.7e-13 50.4 0.0 3.6e-13 49.3 0.0 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF48190 - 0.016 15.0 0.0 0.039 13.8 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase zf-CRD PF17979.1 ORF46700 - 0.018 15.1 3.6 0.24 11.5 0.2 2.4 2 0 0 2 2 2 0 Cysteine rich domain with multizinc binding regions Ferrochelatase PF00762.19 ORF46098 - 1.6e-92 310.0 0.0 1.9e-92 309.7 0.0 1.1 1 0 0 1 1 1 1 Ferrochelatase Phage_gp53 PF11246.8 ORF46098 - 0.019 14.7 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 Base plate wedge protein 53 DnaG_DnaB_bind PF08278.11 ORF46098 - 0.019 15.6 0.0 0.18 12.4 0.0 2.2 2 0 0 2 2 2 0 DNA primase DnaG DnaB-binding CbiX PF01903.17 ORF46098 - 0.11 12.9 0.0 11 6.5 0.0 2.3 2 0 0 2 2 2 0 CbiX Sgf11_N PF18519.1 ORF33580 - 0.089 12.4 0.2 0.2 11.2 0.2 1.5 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain MCR_alpha PF02249.17 ORF33580 - 0.21 12.0 1.0 0.48 10.9 0.2 1.9 2 0 0 2 2 2 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain Ribosomal_L3 PF00297.22 ORF25531 - 7.7e-165 548.3 12.7 8.8e-165 548.1 12.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 M16C_assoc PF08367.11 ORF24773 - 5e-10 38.9 0.5 1e-09 37.9 0.5 1.5 1 0 0 1 1 1 1 Peptidase M16C associated Peptidase_M16_C PF05193.21 ORF24773 - 0.00014 21.9 0.7 0.0011 19.1 0.1 2.5 3 0 0 3 3 3 1 Peptidase M16 inactive domain Asp_Arg_Hydrox PF05118.15 ORF2189 - 3.2e-14 53.0 0.0 6.1e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase TPR_2 PF07719.17 ORF2189 - 0.013 15.6 0.5 0.039 14.1 0.5 1.9 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF2189 - 0.037 14.5 1.5 0.083 13.4 0.5 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Cupin_2 PF07883.11 ORF2189 - 0.043 13.5 0.0 0.093 12.5 0.0 1.5 1 0 0 1 1 1 0 Cupin domain TPR_12 PF13424.6 ORF2189 - 0.055 13.8 0.4 0.14 12.4 0.4 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat CDO_I PF05995.12 ORF2189 - 0.059 12.7 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Cysteine dioxygenase type I TPR_14 PF13428.6 ORF2189 - 0.12 13.3 4.2 0.45 11.5 1.8 3.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF2189 - 0.5 11.1 3.9 0.74 10.5 1.9 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat cNMP_binding PF00027.29 ORF21876 - 2.8e-05 24.1 0.0 5.7e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain tRNA-synt_1d PF00750.19 ORF147398 - 5.6e-66 222.9 0.0 7.1e-66 222.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 ORF147398 - 0.00023 21.7 0.0 0.0005 20.6 0.0 1.6 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF147398 - 0.01 15.2 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain Rotamase_2 PF13145.6 ORF147398 - 0.023 15.6 0.1 1 10.2 0.1 2.1 2 0 0 2 2 2 0 PPIC-type PPIASE domain DUF4298 PF14131.6 ORF147398 - 0.084 12.8 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Lentiviral_Tat PF02998.14 ORF147398 - 6.5 6.9 9.0 0.22 11.6 2.5 2.1 2 0 0 2 2 2 0 Lentiviral Tat protein EssA PF10661.9 ORF138930 - 0.00057 19.7 2.8 0.00057 19.7 2.8 2.2 2 1 1 3 3 3 1 WXG100 protein secretion system (Wss), protein EssA DUF1418 PF07214.12 ORF138930 - 0.63 9.9 0.0 0.63 9.9 0.0 2.7 3 1 0 3 3 3 0 Protein of unknown function (DUF1418) PHO4 PF01384.20 ORF138930 - 0.87 8.6 7.3 0.33 10.0 4.3 1.8 2 0 0 2 2 2 0 Phosphate transporter family Citrate_synt PF00285.21 ORF132853 - 7.2e-92 308.2 0.0 8.2e-92 308.0 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Dynein_C PF18199.1 ORF131506 - 2.5e-109 365.2 0.0 2.9e-109 365.0 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF131506 - 3.8e-30 104.8 0.0 9.6e-30 103.6 0.0 1.7 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain tRNA-synt_1d PF00750.19 ORF125264 - 5.6e-66 222.9 0.0 7.1e-66 222.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 ORF125264 - 0.00023 21.7 0.0 0.0005 20.6 0.0 1.6 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF125264 - 0.01 15.2 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain Rotamase_2 PF13145.6 ORF125264 - 0.023 15.6 0.1 1 10.2 0.1 2.1 2 0 0 2 2 2 0 PPIC-type PPIASE domain DUF4298 PF14131.6 ORF125264 - 0.084 12.8 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Lentiviral_Tat PF02998.14 ORF125264 - 6.5 6.9 9.0 0.22 11.6 2.5 2.1 2 0 0 2 2 2 0 Lentiviral Tat protein Ion_trans PF00520.31 ORF12015 - 4e-16 59.0 25.0 5.7e-16 58.5 25.0 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF12015 - 0.079 12.9 0.0 0.28 11.2 0.0 2.0 1 0 0 1 1 1 0 EF-hand domain Hpt PF01627.23 ORF12015 - 0.11 12.7 0.0 0.25 11.6 0.0 1.6 1 0 0 1 1 1 0 Hpt domain EF-hand_5 PF13202.6 ORF12015 - 0.13 11.8 1.6 0.21 11.2 0.1 2.1 2 0 0 2 2 2 0 EF hand EF-hand_1 PF00036.32 ORF12015 - 0.17 11.5 0.7 0.43 10.2 0.1 2.1 2 0 0 2 2 2 0 EF hand F_bP_aldolase PF01116.20 ORF11913 - 6.2e-86 288.4 0.0 7.1e-86 288.1 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Torsin PF06309.11 ORF11913 - 0.19 11.9 0.0 0.96 9.6 0.0 2.0 2 0 0 2 2 2 0 Torsin zf-RING_2 PF13639.6 ORF115544 - 7.2e-11 42.2 9.1 1.2e-10 41.5 9.1 1.4 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF115544 - 1.3e-08 35.0 6.6 3.1e-08 33.8 6.6 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF115544 - 1.2e-07 31.5 9.2 2.2e-07 30.6 9.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF115544 - 2.2e-07 30.5 6.5 5e-07 29.3 6.5 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF115544 - 2.9e-06 27.0 8.4 5.1e-06 26.2 8.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF115544 - 5.2e-05 23.0 6.2 9.2e-05 22.2 6.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF115544 - 0.00015 21.7 5.8 0.00045 20.2 5.8 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF115544 - 0.00041 20.2 8.2 0.00072 19.5 8.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF115544 - 0.00053 19.9 8.1 0.0013 18.7 8.1 1.7 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF115544 - 0.0062 16.4 7.9 0.011 15.6 7.9 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 FAM176 PF14851.6 ORF115544 - 0.01 15.5 2.0 0.68 9.6 0.0 2.5 2 0 0 2 2 2 0 FAM176 family Zn_ribbon_17 PF17120.5 ORF115544 - 0.038 13.6 5.6 0.074 12.7 5.6 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF115544 - 0.039 14.1 8.4 0.074 13.2 8.4 1.5 1 0 0 1 1 1 0 RING-variant domain zf-C3HC4_4 PF15227.6 ORF115544 - 0.05 13.8 5.6 0.12 12.5 5.6 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Baculo_IE-1 PF05290.11 ORF115544 - 0.05 13.6 2.6 0.08 12.9 2.6 1.3 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) DUF4834 PF16118.5 ORF115544 - 0.28 12.2 10.6 12 6.9 0.2 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) zf-Nse PF11789.8 ORF115544 - 0.42 10.5 3.6 0.78 9.6 3.6 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit FANCL_C PF11793.8 ORF115544 - 0.53 10.5 8.5 1.8 8.8 8.5 2.0 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING-like PF08746.11 ORF115544 - 1.6 9.1 4.8 3.5 8.0 4.8 1.6 1 1 0 1 1 1 0 RING-like domain DUF4710 PF15828.5 ORF115544 - 4.6 7.4 8.7 6.4 7.0 7.5 1.8 2 0 0 2 2 1 0 Domain of unknown function (DUF4710) PHD PF00628.29 ORF115544 - 6.2 6.8 7.7 12 5.9 7.7 1.5 1 0 0 1 1 1 0 PHD-finger UQ_con PF00179.26 ORF107164 - 2.4e-07 30.5 0.1 7.9e-07 28.8 0.1 1.8 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF2670 PF10875.8 ORF107164 - 9.3e-06 25.8 1.8 1.6e-05 25.1 1.3 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2670) AcylCoA_dehyd_C PF12186.8 ORF107164 - 0.029 14.5 2.3 0.032 14.4 0.7 1.9 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase C terminal Wbp11 PF09429.10 ORF107164 - 0.041 14.3 3.2 0.16 12.4 3.2 2.0 1 0 0 1 1 1 0 WW domain binding protein 11 tRNA-synt_1d PF00750.19 ORF102340 - 5.6e-66 222.9 0.0 7.1e-66 222.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) Arg_tRNA_synt_N PF03485.16 ORF102340 - 0.00023 21.7 0.0 0.0005 20.6 0.0 1.6 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 ORF102340 - 0.01 15.2 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain Rotamase_2 PF13145.6 ORF102340 - 0.023 15.6 0.1 1 10.2 0.1 2.1 2 0 0 2 2 2 0 PPIC-type PPIASE domain DUF4298 PF14131.6 ORF102340 - 0.084 12.8 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Lentiviral_Tat PF02998.14 ORF102340 - 6.5 6.9 9.0 0.22 11.6 2.5 2.1 2 0 0 2 2 2 0 Lentiviral Tat protein RSN1_7TM PF02714.15 ORF101453 - 0.04 13.2 0.1 0.087 12.1 0.0 1.7 2 0 0 2 2 2 0 Calcium-dependent channel, 7TM region, putative phosphate Anoctamin PF04547.12 ORF101453 - 0.1 11.4 1.8 0.15 10.9 0.0 2.0 2 0 0 2 2 2 0 Calcium-activated chloride channel RR_TM4-6 PF06459.12 ORF101453 - 0.11 12.3 14.7 0.17 11.7 14.7 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF3767 PF12597.8 ORF101453 - 0.99 9.3 4.2 1.1 9.1 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) SprA-related PF12118.8 ORF101453 - 1.9 7.5 10.2 2.6 7.1 10.2 1.1 1 0 0 1 1 1 0 SprA-related family Kinase-PPPase PF03618.14 ORF9256 - 2.5e-72 243.7 0.0 3.7e-72 243.2 0.0 1.3 1 0 0 1 1 1 1 Kinase/pyrophosphorylase Hydrolase_4 PF12146.8 ORF80700 - 9.3e-08 31.6 0.0 1.2e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF80700 - 3.5e-06 26.8 0.4 4.9e-05 23.1 0.4 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF900 PF05990.12 ORF80700 - 0.00082 18.9 0.0 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) DUF676 PF05057.14 ORF80700 - 0.0031 17.1 0.1 0.005 16.4 0.1 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF915 PF06028.11 ORF80700 - 0.0058 16.0 0.0 0.0098 15.3 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF915) Abhydrolase_6 PF12697.7 ORF80700 - 0.01 16.5 0.0 0.015 15.9 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Kinesin PF00225.23 ORF75917 - 3.4e-94 315.5 7.4 3.9e-94 315.3 7.4 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF75917 - 1e-23 83.9 1.2 3.3e-23 82.3 1.2 1.9 1 0 0 1 1 1 1 Microtubule binding Csd3_N PF18059.1 ORF75917 - 0.084 13.4 0.4 0.33 11.5 0.4 2.0 1 0 0 1 1 1 0 Csd3 N-terminal PAH PF02671.21 ORF75917 - 0.16 12.1 1.5 0.82 9.9 0.3 2.8 4 0 0 4 4 4 0 Paired amphipathic helix repeat FAD_binding_3 PF01494.19 ORF7526 - 1.8e-11 43.9 1.0 1e-10 41.4 1.0 1.9 1 1 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF7526 - 0.012 14.6 0.0 0.32 10.0 0.0 2.1 2 0 0 2 2 2 0 Squalene epoxidase cobW PF02492.19 ORF74222 - 2.2e-59 200.0 2.2 2.9e-59 199.6 2.2 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF74222 - 1.3e-18 66.7 0.0 2.6e-18 65.7 0.0 1.5 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain RsgA_GTPase PF03193.16 ORF74222 - 0.00059 19.8 0.1 0.23 11.3 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 ORF74222 - 0.001 18.6 3.9 0.0043 16.6 3.7 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 ORF74222 - 0.011 15.8 1.2 0.13 12.4 1.2 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase ATPase_2 PF01637.18 ORF74222 - 0.021 14.7 0.0 0.04 13.8 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_16 PF13191.6 ORF74222 - 0.031 14.6 0.1 0.053 13.9 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 ORF74222 - 0.084 12.9 0.0 0.19 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 ORF74222 - 0.09 12.7 0.4 0.28 11.1 0.4 1.8 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B TsaE PF02367.17 ORF74222 - 0.1 12.6 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Viral_helicase1 PF01443.18 ORF74222 - 0.12 12.1 0.0 0.25 11.0 0.0 1.6 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 ORF74222 - 0.12 12.6 0.0 0.29 11.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF74222 - 0.12 12.1 0.0 0.34 10.7 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain NACHT PF05729.12 ORF74222 - 0.15 12.0 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_23 PF13476.6 ORF74222 - 0.94 9.9 3.7 2.3 8.7 3.7 1.9 1 1 0 1 1 1 0 AAA domain TRP PF06011.12 ORF67919 - 0.0006 18.7 29.8 0.0006 18.7 29.8 2.5 2 1 0 2 2 2 1 Transient receptor potential (TRP) ion channel Cadherin_C_2 PF16492.5 ORF67919 - 0.082 13.7 0.2 0.082 13.7 0.2 2.7 2 1 1 3 3 3 0 Cadherin cytoplasmic C-terminal Ank_2 PF12796.7 ORF45950 - 1.4e-17 64.0 0.6 5.5e-08 33.3 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF45950 - 5.8e-13 49.1 4.7 6.4e-05 23.4 0.2 5.8 3 1 3 6 6 6 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF45950 - 3.2e-11 42.4 1.1 5.7e-05 23.2 0.0 5.0 4 0 0 4 4 4 2 Ankyrin repeat Ank PF00023.30 ORF45950 - 5.8e-11 42.3 2.0 0.00085 19.7 0.0 4.8 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF45950 - 2.3e-08 34.1 6.1 0.00059 20.1 0.1 5.0 3 1 2 5 5 5 2 Ankyrin repeats (many copies) DUF3447 PF11929.8 ORF45950 - 0.01 15.8 0.0 0.83 9.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3447) MFS_1 PF07690.16 ORF15296 - 3.9e-13 49.1 16.2 3.9e-13 49.1 16.2 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF15296 - 2.2e-08 33.4 23.8 7.9e-07 28.3 23.8 3.0 1 1 0 1 1 1 1 Sugar (and other) transporter Peptidase_M20 PF01546.28 ORF1460 - 9.4e-24 84.3 0.0 1.5e-23 83.5 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF1460 - 1.7e-17 63.3 0.0 3.2e-17 62.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain GTP-bdg_N PF13167.6 ORF144905 - 6.2e-31 106.9 0.0 1.7e-30 105.5 0.0 1.8 2 0 0 2 2 1 1 GTP-binding GTPase N-terminal GTP-bdg_M PF16360.5 ORF144905 - 3e-29 101.4 11.4 3e-29 101.4 11.4 1.8 2 0 0 2 2 1 1 GTP-binding GTPase Middle Region MMR_HSR1 PF01926.23 ORF144905 - 3.2e-22 78.8 0.1 1.2e-21 76.9 0.1 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF144905 - 5.3e-08 32.5 0.0 8.5e-08 31.9 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF144905 - 1.6e-06 28.1 0.1 0.05 13.5 0.1 2.3 2 0 0 2 2 2 2 RsgA GTPase Arf PF00025.21 ORF144905 - 1.4e-05 24.6 0.7 8.9e-05 22.0 0.7 2.0 1 1 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF144905 - 3.5e-05 23.4 0.3 0.03 13.9 0.3 2.5 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 ORF144905 - 0.0022 18.0 0.0 0.0047 16.9 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Dynamin_N PF00350.23 ORF144905 - 0.0026 17.8 0.2 0.2 11.7 0.0 2.4 1 1 1 2 2 2 1 Dynamin family Roc PF08477.13 ORF144905 - 0.0027 17.9 0.1 0.99 9.6 0.0 2.3 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF144905 - 0.0035 17.1 0.3 0.014 15.2 0.1 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein cobW PF02492.19 ORF144905 - 0.0039 16.8 2.1 0.31 10.6 0.5 2.5 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain TniB PF05621.11 ORF144905 - 0.0045 16.4 0.1 0.014 14.8 0.1 1.8 2 0 0 2 2 2 1 Bacterial TniB protein SRPRB PF09439.10 ORF144905 - 0.0068 15.9 0.0 0.012 15.1 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF144905 - 0.022 14.3 0.0 0.067 12.8 0.0 1.8 1 1 0 1 1 1 0 Ras family ABC_tran PF00005.27 ORF144905 - 0.025 15.1 0.0 0.17 12.4 0.0 2.3 1 1 1 2 2 2 0 ABC transporter G-alpha PF00503.20 ORF144905 - 0.048 12.8 0.3 4.7 6.3 0.0 2.5 2 1 0 2 2 2 0 G-protein alpha subunit MnmE_helical PF12631.7 ORF144905 - 0.059 13.5 0.1 0.1 12.8 0.1 1.4 1 0 0 1 1 1 0 MnmE helical domain DUF4011 PF13195.6 ORF144905 - 0.11 12.4 0.1 0.29 11.1 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4011) bZIP_1 PF00170.21 ORF139860 - 0.038 14.1 1.9 0.038 14.1 1.9 1.9 2 0 0 2 2 2 0 bZIP transcription factor Helitron_like_N PF14214.6 ORF136992 - 1.7e-15 57.8 0.0 6.1e-15 55.9 0.0 1.9 2 0 0 2 2 2 1 Helitron helicase-like domain at N-terminus Acyl-CoA_dh_1 PF00441.24 ORF129557 - 3e-38 131.4 1.6 4.2e-38 130.9 1.6 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF129557 - 7.5e-22 77.4 0.0 1.7e-21 76.2 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 ORF129557 - 2.1e-08 34.5 0.0 3.5e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 ORF129557 - 0.0052 17.4 0.0 0.014 16.0 0.0 1.8 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Peptidase_S11 PF00768.20 ORF106223 - 2e-101 338.5 0.1 2.6e-101 338.1 0.1 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase PBP5_C PF07943.13 ORF106223 - 1.1e-24 86.5 0.0 1.9e-24 85.7 0.0 1.4 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain Beta-lactamase2 PF13354.6 ORF106223 - 7.9e-06 25.6 0.0 1.2e-05 25.1 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family Dr_adhesin PF12393.8 ORF106223 - 0.69 10.3 2.9 1.9 8.9 2.9 1.8 1 0 0 1 1 1 0 Dr family adhesin TPR_2 PF07719.17 ORF103044 - 0.18 12.0 4.0 3.2 8.1 0.0 3.5 3 1 1 4 4 4 0 Tetratricopeptide repeat AAA_11 PF13086.6 NODE_13555_length_1205_cov_87.341880_g10154_i0reverse_frame_1 - 0.96 9.2 8.6 1.5 8.5 8.6 1.2 1 0 0 1 1 1 0 AAA domain DUF4317 PF14199.6 ORF98574 - 3.3e-05 23.2 0.1 6.5e-05 22.3 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4317) Hydrolase_4 PF12146.8 ORF95662 - 9.2e-08 31.6 0.0 1.2e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF95662 - 3.5e-06 26.9 0.4 4.9e-05 23.1 0.4 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF900 PF05990.12 ORF95662 - 0.00082 18.9 0.0 0.0016 18.0 0.0 1.5 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) DUF676 PF05057.14 ORF95662 - 0.0031 17.1 0.1 0.005 16.4 0.1 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF915 PF06028.11 ORF95662 - 0.0057 16.0 0.0 0.0097 15.3 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF915) Abhydrolase_6 PF12697.7 ORF95662 - 0.01 16.5 0.0 0.015 15.9 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family AAA_21 PF13304.6 ORF81618 - 4.5e-08 33.3 0.0 7.1e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF81618 - 9.8e-07 29.4 0.1 3.4e-06 27.6 0.0 1.9 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF81618 - 0.0016 18.0 0.0 0.0021 17.5 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF81618 - 0.11 12.8 0.1 0.49 10.7 0.1 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF3697 PF12478.8 ORF6512 - 0.084 13.0 1.6 16 5.7 0.0 2.7 3 0 0 3 3 3 0 Ubiquitin-associated protein 2 UQ_con PF00179.26 ORF57497 - 0.0064 16.1 0.4 0.019 14.6 0.0 1.9 2 0 0 2 2 2 1 Ubiquitin-conjugating enzyme RsmJ PF04378.13 ORF57497 - 0.099 11.8 0.1 0.17 11.1 0.1 1.5 1 0 0 1 1 1 0 Ribosomal RNA large subunit methyltransferase D, RlmJ # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks35.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks35.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks35.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks35.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:14:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Chordopox_L2 PF05803.12 NODE_69501_length_228_cov_0.823834_g61560_i0reverse_frame_3 - 0.062 13.1 0.6 0.07 13.0 0.6 1.1 1 0 0 1 1 1 0 Chordopoxvirus L2 protein Mucin PF01456.17 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_3 - 0.41 10.6 19.5 0.39 10.7 19.5 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein FSA_C PF10479.9 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_3 - 4 5.4 10.0 4 5.4 10.0 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Brr6_like_C_C PF10104.9 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_2 - 0.05 13.4 5.2 0.057 13.2 5.2 1.0 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain IMUP PF15761.5 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_2 - 0.12 13.1 5.1 0.15 12.8 5.1 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein MRI PF15325.6 NODE_69501_length_228_cov_0.823834_g61560_i0forward_frame_2 - 4.5 8.4 6.7 21 6.3 0.0 2.0 1 1 1 2 2 2 0 Modulator of retrovirus infection Ac81 PF05820.11 NODE_69499_length_228_cov_0.829016_g61558_i0forward_frame_2 - 0.27 10.8 6.8 0.17 11.5 4.5 1.7 1 1 1 2 2 2 0 Baculoviridae AC81 DUF2484 PF10658.9 NODE_69492_length_228_cov_0.958549_g61551_i0reverse_frame_3 - 0.0017 18.6 0.0 0.0023 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2484) Rad50_zn_hook PF04423.14 NODE_69490_length_228_cov_0.994819_g61549_i0reverse_frame_2 - 0.039 13.8 0.0 0.051 13.4 0.0 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif MULE PF10551.9 NODE_69488_length_228_cov_1.015544_g61547_i0reverse_frame_3 - 0.11 13.0 0.7 0.14 12.6 0.7 1.1 1 0 0 1 1 1 0 MULE transposase domain Herpes_LP PF03363.13 NODE_69487_length_228_cov_1.025907_g61546_i0forward_frame_2 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus leader protein OAD_gamma PF04277.13 NODE_69484_length_228_cov_1.036269_g61543_i0forward_frame_2 - 0.72 10.5 2.3 1 10.0 2.3 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain EamA PF00892.20 NODE_69482_length_228_cov_1.036269_g61541_i0reverse_frame_3 - 1.4e-06 28.6 2.2 1.7e-06 28.3 2.2 1.0 1 0 0 1 1 1 1 EamA-like transporter family ECM1 PF05782.11 NODE_69482_length_228_cov_1.036269_g61541_i0reverse_frame_2 - 0.025 13.5 3.6 0.029 13.3 3.6 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) Tsg PF04668.12 NODE_69480_length_228_cov_1.056995_g61539_i0reverse_frame_2 - 0.24 12.1 6.8 0.31 11.7 4.9 1.8 1 1 1 2 2 2 0 Twisted gastrulation (Tsg) protein conserved region GNAT_acetyltr_2 PF13718.6 NODE_69479_length_228_cov_1.082902_g61538_i0forward_frame_2 - 0.36 10.2 0.7 0.39 10.1 0.7 1.0 1 0 0 1 1 1 0 GNAT acetyltransferase 2 3A PF00803.18 NODE_69475_length_228_cov_1.176166_g61534_i0forward_frame_3 - 0.043 13.1 0.0 0.043 13.1 0.0 1.1 1 0 0 1 1 1 0 3A/RNA2 movement protein family HEV_ORF1 PF02444.16 NODE_69474_length_228_cov_1.186528_g61533_i0forward_frame_3 - 0.0093 16.5 2.6 0.012 16.2 2.6 1.1 1 0 0 1 1 1 1 Hepatitis E virus ORF-2 (Putative capsid protein) T3SS_ATPase_C PF18269.1 NODE_69470_length_228_cov_1.202073_g61529_i0reverse_frame_2 - 0.11 12.4 0.0 0.16 11.8 0.0 1.4 1 1 0 1 1 1 0 T3SS EscN ATPase C-terminal domain Vps54_N PF10475.9 NODE_69468_length_228_cov_1.202073_g61527_i0reverse_frame_2 - 0.028 13.7 0.1 0.031 13.6 0.1 1.1 1 0 0 1 1 1 0 Vacuolar-sorting protein 54, of GARP complex SNARE PF05739.19 NODE_69467_length_228_cov_1.207254_g61526_i0forward_frame_3 - 0.077 13.0 0.6 0.13 12.3 0.6 1.4 1 0 0 1 1 1 0 SNARE domain Cmyb_C PF09316.10 NODE_69464_length_228_cov_1.227979_g61523_i0reverse_frame_3 - 0.062 13.0 0.1 0.07 12.8 0.1 1.1 1 0 0 1 1 1 0 C-myb, C-terminal DUF5585 PF17823.1 NODE_69463_length_228_cov_1.233161_g61522_i0forward_frame_2 - 0.11 11.4 2.0 0.13 11.2 2.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5585) Spt20 PF12090.8 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_3 - 0.55 9.8 9.9 0.57 9.7 9.9 1.0 1 0 0 1 1 1 0 Spt20 family ODV-E18 PF10717.9 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.0039 17.0 6.4 0.0039 17.0 6.4 1.9 1 1 0 2 2 2 1 Occlusion-derived virus envelope protein ODV-E18 Shisa PF13908.6 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.0044 17.3 0.7 0.0059 16.9 0.7 1.3 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator SARAF PF06682.12 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.027 14.1 0.4 0.032 13.9 0.4 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Amnionless PF14828.6 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.03 13.2 1.2 0.03 13.2 1.2 1.0 1 0 0 1 1 1 0 Amnionless Orf78 PF06024.12 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.046 14.0 4.7 0.1 12.9 4.7 1.6 1 1 0 1 1 1 0 Orf78 (ac78) Baculo_11_kDa PF06143.11 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.058 13.0 0.8 0.058 13.0 0.8 1.7 2 0 0 2 2 2 0 Baculovirus 11 kDa family RIFIN PF02009.16 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.081 12.8 2.6 0.1 12.5 2.6 1.2 1 0 0 1 1 1 0 Rifin Peptidase_M56 PF05569.11 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.085 12.0 2.3 0.085 12.0 2.3 1.0 1 0 0 1 1 1 0 BlaR1 peptidase M56 Gemini_mov PF01708.16 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.2 11.4 2.8 0.28 11.0 2.8 1.2 1 0 0 1 1 1 0 Geminivirus putative movement protein DUF2615 PF11027.8 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.37 11.0 3.3 0.72 10.0 3.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) TMEM154 PF15102.6 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.37 10.7 3.2 0.2 11.5 1.6 1.4 1 1 1 2 2 2 0 TMEM154 protein family DUF3357 PF11837.8 NODE_69459_length_228_cov_1.238342_g61518_i0forward_frame_2 - 0.56 10.7 8.3 0.82 10.2 8.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3357) HpaP PF09483.10 NODE_69456_length_228_cov_1.238342_g61515_i0forward_frame_2 - 0.074 13.3 0.2 0.089 13.0 0.2 1.3 1 1 0 1 1 1 0 Type III secretion protein (HpaP) Pkr1 PF08636.10 NODE_69456_length_228_cov_1.238342_g61515_i0forward_frame_2 - 0.11 12.6 0.3 0.11 12.6 0.3 2.4 1 1 2 3 3 3 0 ER protein Pkr1 Uso1_p115_head PF04869.14 NODE_69451_length_228_cov_1.243523_g61510_i0forward_frame_3 - 0.12 11.5 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, head region PBP_sp32 PF07222.12 NODE_69450_length_228_cov_1.243523_g61509_i0forward_frame_2 - 0.51 9.8 2.0 0.59 9.6 2.0 1.1 1 0 0 1 1 1 0 Proacrosin binding protein sp32 MORN PF02493.20 NODE_69449_length_228_cov_1.243523_g61508_i0reverse_frame_3 - 7.4e-07 28.7 2.2 7.8e-06 25.5 0.2 3.1 3 0 0 3 3 3 1 MORN repeat UPF0640 PF15114.6 NODE_69446_length_228_cov_1.243523_g61505_i0reverse_frame_3 - 0.063 13.1 0.5 0.088 12.6 0.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0640 STAT_bind PF02864.15 NODE_69443_length_228_cov_1.274611_g61502_i0reverse_frame_2 - 0.11 13.0 0.1 0.13 12.8 0.1 1.0 1 0 0 1 1 1 0 STAT protein, DNA binding domain DUF639 PF04842.12 NODE_69443_length_228_cov_1.274611_g61502_i0forward_frame_2 - 0.085 12.3 0.2 0.085 12.3 0.2 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) GASA PF02704.14 NODE_69441_length_228_cov_1.284974_g61500_i0forward_frame_3 - 0.96 9.6 17.3 1.9 8.7 17.4 1.6 1 1 0 1 1 1 0 Gibberellin regulated protein WAP PF00095.21 NODE_69439_length_228_cov_1.310881_g61498_i0forward_frame_3 - 2.3 8.7 12.3 0.5 10.8 7.7 2.1 2 0 0 2 2 2 0 WAP-type (Whey Acidic Protein) 'four-disulfide core' DUF5445 PF17520.2 NODE_69438_length_228_cov_1.310881_g61497_i0forward_frame_2 - 0.065 13.1 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5445) NAR2 PF16974.5 NODE_69436_length_228_cov_1.331606_g61495_i0reverse_frame_2 - 0.043 13.2 4.3 0.045 13.2 4.3 1.0 1 0 0 1 1 1 0 High-affinity nitrate transporter accessory WAP PF00095.21 NODE_69435_length_228_cov_1.341969_g61494_i0forward_frame_3 - 2.4 8.6 9.3 13 6.2 9.3 2.0 1 1 0 1 1 1 0 WAP-type (Whey Acidic Protein) 'four-disulfide core' Imm70 PF15601.6 NODE_69433_length_228_cov_1.352332_g61492_i0forward_frame_2 - 0.25 10.9 0.0 0.29 10.7 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 70 DUF3915 PF13054.6 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_3 - 0.04 13.9 7.2 0.053 13.5 7.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_3 - 0.24 9.7 11.4 0.22 9.8 11.4 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_2 - 0.0012 18.8 2.2 0.0013 18.7 2.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_2 - 0.012 13.9 9.7 0.013 13.8 9.7 1.0 1 0 0 1 1 1 0 Atrophin-1 family Apis_Csd PF11671.8 NODE_69430_length_228_cov_1.373057_g61489_i0reverse_frame_2 - 0.65 10.0 4.6 0.75 9.8 4.6 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein Nore1-SARAH PF16517.5 NODE_69429_length_228_cov_1.373057_g61488_i0reverse_frame_3 - 0.053 13.4 0.8 0.17 11.8 0.4 1.9 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Polysacc_synt_3 PF13440.6 NODE_69429_length_228_cov_1.373057_g61488_i0forward_frame_3 - 0.06 12.6 0.1 0.067 12.4 0.1 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Cas_Csn2 PF09711.10 NODE_69428_length_228_cov_1.378238_g61487_i0reverse_frame_2 - 0.0089 15.7 2.9 0.0096 15.6 2.9 1.1 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csn2) FtsL PF04999.13 NODE_69427_length_228_cov_1.383420_g61486_i0reverse_frame_2 - 0.16 12.0 1.1 0.2 11.7 1.1 1.2 1 0 0 1 1 1 0 Cell division protein FtsL DUF3721 PF12518.8 NODE_69423_length_228_cov_1.414508_g61482_i0reverse_frame_2 - 0.21 11.5 0.5 0.33 10.8 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function Ac81 PF05820.11 NODE_69420_length_228_cov_1.445596_g61479_i0forward_frame_3 - 0.018 14.6 2.4 0.02 14.5 2.4 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 p12I PF12233.8 NODE_69418_length_228_cov_1.450777_g61477_i0reverse_frame_2 - 0.018 15.6 0.6 0.021 15.3 0.6 1.1 1 0 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein Fer4_10 PF13237.6 NODE_69418_length_228_cov_1.450777_g61477_i0forward_frame_2 - 0.00071 19.6 1.2 0.0012 18.9 1.2 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_69418_length_228_cov_1.450777_g61477_i0forward_frame_2 - 0.0026 17.9 1.2 0.004 17.3 1.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 NODE_69418_length_228_cov_1.450777_g61477_i0forward_frame_2 - 0.057 14.0 2.0 0.11 13.1 2.0 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.27 NODE_69418_length_228_cov_1.450777_g61477_i0forward_frame_2 - 0.059 13.2 3.4 1.3 9.0 1.7 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain ETF_QO PF05187.13 NODE_69418_length_228_cov_1.450777_g61477_i0forward_frame_2 - 0.062 13.4 0.6 0.065 13.4 0.6 1.2 1 0 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_11 PF13247.6 NODE_69418_length_228_cov_1.450777_g61477_i0forward_frame_2 - 0.079 13.1 2.8 0.2 11.8 2.9 1.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Integrase_Zn PF02022.19 NODE_69418_length_228_cov_1.450777_g61477_i0forward_frame_2 - 0.13 12.2 0.1 0.13 12.2 0.1 1.9 2 0 0 2 2 2 0 Integrase Zinc binding domain TPR_MLP1_2 PF07926.12 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.015 15.3 1.4 0.019 15.0 1.4 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein CCDC-167 PF15188.6 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.023 15.0 1.1 0.031 14.6 1.1 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Atg14 PF10186.9 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.029 13.5 3.0 0.033 13.3 3.0 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LPP PF04728.13 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.042 14.2 0.6 0.065 13.6 0.6 1.3 1 0 0 1 1 1 0 Lipoprotein leucine-zipper Vps51 PF08700.11 NODE_69414_length_228_cov_1.481865_g61473_i0forward_frame_2 - 0.047 13.8 1.8 0.06 13.4 0.9 1.7 2 0 0 2 2 2 0 Vps51/Vps67 Nup188 PF10487.9 NODE_69413_length_228_cov_1.528497_g61472_i0forward_frame_3 - 0.1 10.5 0.0 0.1 10.5 0.0 1.0 1 0 0 1 1 1 0 Nucleoporin subcomplex protein binding to Pom34 Ank_2 PF12796.7 NODE_69413_length_228_cov_1.528497_g61472_i0forward_frame_2 - 0.009 16.6 0.0 0.014 16.0 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_69413_length_228_cov_1.528497_g61472_i0forward_frame_2 - 0.02 15.4 0.1 0.03 14.9 0.0 1.5 1 1 0 1 1 1 0 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_69413_length_228_cov_1.528497_g61472_i0forward_frame_2 - 0.033 14.7 0.1 0.05 14.2 0.1 1.3 1 0 0 1 1 1 0 Ankyrin repeat Ank_5 PF13857.6 NODE_69413_length_228_cov_1.528497_g61472_i0forward_frame_2 - 0.071 13.4 0.0 0.1 12.9 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) MFS_1 PF07690.16 NODE_69410_length_228_cov_1.554404_g61469_i0reverse_frame_3 - 2.3e-07 30.0 7.7 2.9e-07 29.8 7.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_4 PF06779.14 NODE_69410_length_228_cov_1.554404_g61469_i0reverse_frame_3 - 3.9e-06 26.4 1.5 4e-06 26.4 1.5 1.0 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB A2L_zn_ribbon PF08792.10 NODE_69410_length_228_cov_1.554404_g61469_i0forward_frame_2 - 0.0083 15.8 2.4 0.021 14.5 2.4 1.7 1 0 0 1 1 1 1 A2L zinc ribbon domain NDUF_C2 PF06374.11 NODE_69408_length_228_cov_1.580311_g61467_i0forward_frame_3 - 0.072 13.2 0.1 0.083 13.0 0.1 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) G3P_antiterm PF04309.12 NODE_69407_length_228_cov_1.585492_g61466_i0reverse_frame_2 - 0.057 12.8 0.0 0.07 12.5 0.0 1.1 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator Colipase PF01114.18 NODE_69406_length_228_cov_1.601036_g61465_i0forward_frame_2 - 0.069 12.8 6.0 0.2 11.3 0.3 2.4 2 0 0 2 2 2 0 Colipase, N-terminal domain HTH_Tnp_Tc3_2 PF01498.18 NODE_69405_length_228_cov_1.606218_g61464_i0forward_frame_3 - 0.13 12.5 0.1 0.21 11.9 0.1 1.4 1 0 0 1 1 1 0 Transposase DUF2254 PF10011.9 NODE_69400_length_228_cov_1.632124_g61459_i0forward_frame_3 - 1.1 8.0 4.1 1.2 7.8 4.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Baculo_PP31 PF05311.11 NODE_69400_length_228_cov_1.632124_g61459_i0forward_frame_2 - 0.075 12.5 0.3 0.094 12.2 0.3 1.1 1 0 0 1 1 1 0 Baculovirus 33KDa late protein (PP31) RRM_Rrp7 PF17799.1 NODE_69399_length_228_cov_1.637306_g61458_i0forward_frame_2 - 0.013 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Rrp7 RRM-like N-terminal domain TRAF_BIRC3_bd PF16673.5 NODE_69399_length_228_cov_1.637306_g61458_i0forward_frame_2 - 0.033 14.0 0.4 0.1 12.4 0.4 1.8 1 1 0 1 1 1 0 TNF receptor-associated factor BIRC3 binding domain ARA70 PF12489.8 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_3 - 0.021 15.0 0.8 0.025 14.7 0.8 1.0 1 0 0 1 1 1 0 Nuclear coactivator AAA_11 PF13086.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 1.3e-18 67.7 0.0 1.4e-18 67.7 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 1.4e-08 35.2 0.0 1.6e-08 35.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 5.1e-06 26.3 0.0 5.6e-06 26.2 0.0 1.0 1 0 0 1 1 1 1 AAA domain UvrD-helicase PF00580.21 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.00043 19.9 0.0 0.00052 19.6 0.0 1.0 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain PhoH PF02562.16 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.0014 18.1 0.0 0.0014 18.1 0.0 1.0 1 0 0 1 1 1 1 PhoH-like protein Helicase_RecD PF05127.14 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.0089 15.9 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 Helicase NACHT PF05729.12 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.013 15.4 0.0 0.015 15.2 0.0 1.1 1 0 0 1 1 1 0 NACHT domain DEAD PF00270.29 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.02 14.7 0.0 0.023 14.5 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase IstB_IS21 PF01695.17 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.023 14.5 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein ResIII PF04851.15 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.026 14.6 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_22 PF13401.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.032 14.5 0.0 0.035 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.033 14.6 0.0 0.039 14.4 0.0 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.058 13.3 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain Adeno_IVa2 PF02456.15 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.11 11.2 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_25 PF13481.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.12 11.9 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.13 11.5 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.16 12.4 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain RuvB_N PF05496.12 NODE_69394_length_228_cov_1.683938_g61453_i0reverse_frame_2 - 0.19 11.5 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain TILa PF12714.7 NODE_69393_length_228_cov_1.709845_g61452_i0forward_frame_3 - 0.002 18.0 3.9 0.0026 17.7 3.9 1.2 1 0 0 1 1 1 1 TILa domain MORN PF02493.20 NODE_69392_length_228_cov_1.715026_g61451_i0reverse_frame_2 - 1.4e-14 53.0 33.4 1.1e-09 37.6 5.3 4.4 5 0 0 5 5 5 4 MORN repeat SUR7 PF06687.12 NODE_69392_length_228_cov_1.715026_g61451_i0forward_frame_3 - 3 7.4 11.7 3.4 7.3 11.7 1.0 1 0 0 1 1 1 0 SUR7/PalI family Hexapep PF00132.24 NODE_69385_length_228_cov_1.839378_g61444_i0reverse_frame_3 - 0.0013 18.4 0.1 0.041 13.6 0.2 2.1 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Gram_pos_anchor PF00746.21 NODE_69385_length_228_cov_1.839378_g61444_i0reverse_frame_2 - 0.014 15.4 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Cadherin_C_2 PF16492.5 NODE_69385_length_228_cov_1.839378_g61444_i0reverse_frame_2 - 0.11 13.2 0.5 0.14 13.0 0.5 1.2 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal IQ PF00612.27 NODE_69384_length_228_cov_1.839378_g61443_i0forward_frame_2 - 0.016 15.0 0.2 0.045 13.5 0.1 1.9 2 0 0 2 2 2 0 IQ calmodulin-binding motif BET PF17035.5 NODE_69382_length_228_cov_1.854922_g61441_i0reverse_frame_2 - 0.0078 16.4 0.6 0.012 15.8 0.3 1.5 1 1 0 1 1 1 1 Bromodomain extra-terminal - transcription regulation CSTF2_hinge PF14327.6 NODE_69382_length_228_cov_1.854922_g61441_i0reverse_frame_2 - 0.082 13.4 0.3 0.11 13.0 0.3 1.3 1 0 0 1 1 1 0 Hinge domain of cleavage stimulation factor subunit 2 TEX12 PF15219.6 NODE_69379_length_228_cov_1.865285_g61438_i0reverse_frame_3 - 0.061 13.6 0.0 0.07 13.5 0.0 1.2 1 0 0 1 1 1 0 Testis-expressed 12 VitD-bind_III PF09164.10 NODE_69376_length_228_cov_1.911917_g61435_i0reverse_frame_3 - 0.067 13.2 0.3 11 6.1 0.1 2.1 2 0 0 2 2 2 0 Vitamin D binding protein, domain III Glyco_trans_4_4 PF13579.6 NODE_69376_length_228_cov_1.911917_g61435_i0forward_frame_3 - 0.074 13.5 0.3 0.084 13.3 0.3 1.0 1 0 0 1 1 1 0 Glycosyl transferase 4-like domain RVT_1 PF00078.27 NODE_69372_length_228_cov_1.943005_g61431_i0forward_frame_3 - 0.058 12.9 0.0 0.065 12.7 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) zf-CCCH PF00642.24 NODE_69368_length_228_cov_2.005181_g61427_i0reverse_frame_3 - 5.3e-09 35.8 1.2 9.1e-09 35.0 1.2 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_69368_length_228_cov_2.005181_g61427_i0reverse_frame_3 - 1.3e-05 25.1 2.2 2.3e-05 24.3 2.2 1.4 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 NODE_69368_length_228_cov_2.005181_g61427_i0reverse_frame_3 - 0.00016 21.4 1.3 0.00022 20.9 1.3 1.2 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_2 PF14608.6 NODE_69368_length_228_cov_2.005181_g61427_i0reverse_frame_3 - 0.012 16.1 2.9 0.021 15.3 2.9 1.5 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger DUF4957 PF16318.5 NODE_69367_length_228_cov_2.015544_g61426_i0forward_frame_2 - 0.011 15.7 0.2 0.012 15.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) Xpo1 PF08389.12 NODE_69363_length_228_cov_2.051813_g61422_i0reverse_frame_3 - 0.027 14.5 0.4 0.029 14.4 0.4 1.0 1 0 0 1 1 1 0 Exportin 1-like protein DUF5445 PF17520.2 NODE_69363_length_228_cov_2.051813_g61422_i0reverse_frame_2 - 0.059 13.2 0.3 0.079 12.8 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5445) Latarcin PF10279.9 NODE_69363_length_228_cov_2.051813_g61422_i0forward_frame_3 - 0.15 12.5 0.1 0.21 12.0 0.1 1.2 1 0 0 1 1 1 0 Latarcin precursor SLATT_5 PF18160.1 NODE_69363_length_228_cov_2.051813_g61422_i0forward_frame_2 - 0.021 14.2 0.7 0.024 14.0 0.7 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 DUF4499 PF14934.6 NODE_69361_length_228_cov_2.056995_g61420_i0forward_frame_3 - 0.058 13.7 0.2 0.51 10.7 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4499) Mannitol_dh_C PF08125.13 NODE_69360_length_228_cov_2.067358_g61419_i0forward_frame_3 - 2.3e-12 47.0 0.0 2.4e-12 46.9 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase C-terminal domain Fer4_21 PF14697.6 NODE_69354_length_228_cov_2.113990_g61413_i0forward_frame_2 - 6.5 7.0 15.3 0.17 12.0 7.0 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Lamprin PF06403.11 NODE_69349_length_228_cov_2.165803_g61408_i0reverse_frame_3 - 2 8.4 8.1 0.81 9.6 2.1 2.0 1 1 1 2 2 2 0 Lamprin Helicase_C PF00271.31 NODE_69344_length_228_cov_2.196891_g61403_i0forward_frame_2 - 2.6e-06 27.7 0.0 5.1e-06 26.8 0.0 1.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain RB_A PF01858.17 NODE_69341_length_228_cov_2.238342_g61400_i0reverse_frame_2 - 0.039 13.8 0.0 0.044 13.6 0.0 1.0 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain zf-HIT PF04438.16 NODE_69341_length_228_cov_2.238342_g61400_i0forward_frame_3 - 1.5 8.8 5.2 4.7 7.2 0.1 2.6 3 0 0 3 3 3 0 HIT zinc finger E1_4HB PF16191.5 NODE_69340_length_228_cov_2.238342_g61399_i0forward_frame_3 - 0.043 14.0 0.1 0.059 13.6 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle Orf78 PF06024.12 NODE_69338_length_228_cov_2.243523_g61397_i0forward_frame_3 - 0.023 15.0 0.5 0.024 14.9 0.5 1.2 1 0 0 1 1 1 0 Orf78 (ac78) FtsL PF04999.13 NODE_69338_length_228_cov_2.243523_g61397_i0forward_frame_3 - 0.053 13.5 0.1 0.058 13.4 0.1 1.1 1 0 0 1 1 1 0 Cell division protein FtsL zf-UDP PF14569.6 NODE_69336_length_228_cov_2.259067_g61395_i0forward_frame_3 - 0.12 12.5 1.9 0.15 12.2 1.9 1.2 1 0 0 1 1 1 0 Zinc-binding RING-finger CrgA PF06781.12 NODE_69334_length_228_cov_2.279793_g61393_i0reverse_frame_2 - 0.073 13.1 0.0 0.088 12.9 0.0 1.1 1 0 0 1 1 1 0 Cell division protein CrgA MORN_2 PF07661.13 NODE_69334_length_228_cov_2.279793_g61393_i0reverse_frame_2 - 0.086 13.1 0.6 0.15 12.3 0.6 1.4 1 0 0 1 1 1 0 MORN repeat variant ATG27 PF09451.10 NODE_69334_length_228_cov_2.279793_g61393_i0forward_frame_3 - 0.3 10.9 0.5 0.36 10.6 0.5 1.1 1 0 0 1 1 1 0 Autophagy-related protein 27 XET_C PF06955.12 NODE_69333_length_228_cov_2.279793_g61392_i0reverse_frame_3 - 0.016 15.1 0.2 0.027 14.3 0.2 1.4 1 0 0 1 1 1 0 Xyloglucan endo-transglycosylase (XET) C-terminus Crisp PF08562.10 NODE_69333_length_228_cov_2.279793_g61392_i0reverse_frame_3 - 0.061 13.9 7.1 0.21 12.2 7.1 1.9 1 1 0 1 1 1 0 Crisp SNAD4 PF18750.1 NODE_69333_length_228_cov_2.279793_g61392_i0forward_frame_2 - 0.0061 16.7 0.3 0.0069 16.5 0.3 1.1 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 BC10 PF06726.12 NODE_69333_length_228_cov_2.279793_g61392_i0forward_frame_2 - 0.0066 16.7 0.5 0.0089 16.2 0.5 1.3 1 0 0 1 1 1 1 Bladder cancer-related protein BC10 APOBEC1 PF18769.1 NODE_69333_length_228_cov_2.279793_g61392_i0forward_frame_2 - 0.0084 16.3 1.5 0.0091 16.2 1.5 1.1 1 0 0 1 1 1 1 APOBEC1 APOBEC4 PF18775.1 NODE_69333_length_228_cov_2.279793_g61392_i0forward_frame_2 - 0.12 12.6 0.6 0.68 10.1 0.1 2.0 1 1 1 2 2 2 0 APOBEC4 DUF1995 PF09353.10 NODE_69326_length_228_cov_2.404145_g61385_i0reverse_frame_2 - 0.098 12.7 0.0 0.099 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1995) GspL_C PF12693.7 NODE_69325_length_228_cov_2.414508_g61384_i0reverse_frame_3 - 1.5e-14 54.2 0.0 1.7e-14 53.9 0.0 1.0 1 0 0 1 1 1 1 GspL periplasmic domain LINES_N PF14694.6 NODE_69324_length_228_cov_2.424870_g61383_i0reverse_frame_3 - 0.0093 15.5 0.8 0.011 15.3 0.8 1.0 1 0 0 1 1 1 1 Lines N-terminus UPF0139 PF03669.13 NODE_69324_length_228_cov_2.424870_g61383_i0forward_frame_3 - 0.15 12.0 1.3 0.2 11.6 0.9 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0139) SPECT1 PF18680.1 NODE_69323_length_228_cov_2.440415_g61382_i0reverse_frame_3 - 0.083 12.6 0.0 0.09 12.4 0.0 1.0 1 0 0 1 1 1 0 Plasmodium host cell traversal SPECT1 TAFH PF07531.14 NODE_69322_length_228_cov_2.440415_g61381_i0reverse_frame_3 - 0.022 14.8 0.1 0.032 14.3 0.1 1.4 1 0 0 1 1 1 0 NHR1 homology to TAF DUF326 PF03860.16 NODE_69321_length_228_cov_2.455959_g61380_i0reverse_frame_2 - 0.017 15.1 6.1 0.025 14.6 6.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF326) ADK_lid PF05191.14 NODE_69319_length_228_cov_2.481865_g61378_i0forward_frame_3 - 1.4e-13 50.5 0.1 2e-13 50.0 0.1 1.2 1 0 0 1 1 1 1 Adenylate kinase, active site lid ADK PF00406.22 NODE_69319_length_228_cov_2.481865_g61378_i0forward_frame_3 - 2.4e-13 50.4 0.0 2.4e-13 50.4 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 NODE_69319_length_228_cov_2.481865_g61378_i0forward_frame_3 - 0.00052 20.4 0.0 0.0006 20.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain Rota_NS53 PF00981.17 NODE_69306_length_228_cov_2.994819_g61365_i0reverse_frame_3 - 7.9 5.2 6.1 9 5.0 6.1 1.0 1 0 0 1 1 1 0 Rotavirus RNA-binding Protein 53 (NS53) Pkinase PF00069.25 NODE_69302_length_228_cov_3.108808_g61361_i0reverse_frame_3 - 9.7e-06 25.1 0.0 9.9e-06 25.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Cu-binding_MopE PF11617.8 NODE_69302_length_228_cov_3.108808_g61361_i0reverse_frame_3 - 1.1 9.5 5.0 2.5 8.3 0.1 2.4 2 1 0 2 2 2 0 Putative metal-binding motif DUF2744 PF10910.8 NODE_69299_length_228_cov_3.518135_g61358_i0reverse_frame_2 - 0.035 14.1 0.2 0.052 13.5 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2744) RRXRR PF14239.6 NODE_69299_length_228_cov_3.518135_g61358_i0forward_frame_3 - 0.43 10.4 5.1 0.45 10.3 5.1 1.1 1 0 0 1 1 1 0 RRXRR protein Gaa1 PF04114.14 NODE_69294_length_228_cov_3.989637_g61353_i0reverse_frame_2 - 4.8 6.1 7.1 5.4 5.9 7.1 1.1 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component Keratin_2_head PF16208.5 NODE_69292_length_228_cov_4.404145_g61351_i0reverse_frame_2 - 9.2 6.4 30.9 13 5.9 30.9 1.3 1 0 0 1 1 1 0 Keratin type II head Bac_globin PF01152.21 NODE_69292_length_228_cov_4.404145_g61351_i0forward_frame_2 - 0.18 11.9 4.9 0.21 11.7 4.9 1.3 1 1 0 1 1 1 0 Bacterial-like globin PRY PF13765.6 NODE_69290_length_228_cov_4.430052_g61349_i0forward_frame_3 - 0.14 11.8 0.4 3.4 7.4 0.0 2.4 1 1 1 2 2 2 0 SPRY-associated domain Cyd_oper_YbgE PF09600.10 NODE_69288_length_228_cov_6.082902_g61347_i0forward_frame_3 - 0.0089 16.4 0.2 0.014 15.7 0.2 1.4 1 0 0 1 1 1 1 Cyd operon protein YbgE (Cyd_oper_YbgE) DUF5554 PF17709.1 NODE_69288_length_228_cov_6.082902_g61347_i0forward_frame_3 - 0.82 9.8 5.3 1.1 9.4 3.4 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5554) TRIC PF05197.13 NODE_69287_length_228_cov_14.637306_g61346_i0forward_frame_3 - 0.051 13.1 2.1 0.051 13.2 2.1 1.1 1 0 0 1 1 1 0 TRIC channel Opy2 PF09463.10 NODE_69284_length_228_cov_25.331606_g61343_i0reverse_frame_3 - 0.21 11.9 3.1 0.23 11.8 1.6 1.7 2 0 0 2 2 2 0 Opy2 protein UCH PF00443.29 NODE_69282_length_228_cov_33.098446_g61341_i0reverse_frame_2 - 1.6e-09 37.7 0.1 1.6e-09 37.7 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Herpes_UL95 PF03038.14 NODE_69281_length_228_cov_36.544041_g61340_i0reverse_frame_3 - 0.15 11.2 0.3 0.16 11.1 0.3 1.1 1 0 0 1 1 1 0 UL95 family YrvL PF14184.6 NODE_69280_length_228_cov_36.808290_g61339_i0reverse_frame_3 - 0.086 12.9 10.0 0.13 12.4 10.0 1.3 1 1 0 1 1 1 0 Regulatory protein YrvL Pkinase PF00069.25 NODE_69280_length_228_cov_36.808290_g61339_i0forward_frame_3 - 9.7e-05 21.9 1.2 0.00011 21.7 1.2 1.1 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 NODE_69280_length_228_cov_36.808290_g61339_i0forward_frame_3 - 0.00084 19.0 0.3 0.00094 18.9 0.3 1.0 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 REC104 PF17378.2 NODE_69280_length_228_cov_36.808290_g61339_i0forward_frame_2 - 0.0074 16.1 0.5 0.0081 16.0 0.5 1.0 1 0 0 1 1 1 1 Meiotic recombination protein REC104 Spore_GerAC PF05504.11 NODE_69279_length_228_cov_39.093264_g61338_i0reverse_frame_2 - 0.046 13.9 0.1 0.048 13.9 0.1 1.0 1 0 0 1 1 1 0 Spore germination B3/ GerAC like, C-terminal Roc PF08477.13 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 7.8e-07 29.3 0.0 1e-06 28.9 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 4.7e-06 26.3 0.1 6.4e-06 25.9 0.1 1.2 1 0 0 1 1 1 1 Ras family AAA_7 PF12775.7 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.0022 17.5 0.1 0.0026 17.3 0.1 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region SRPRB PF09439.10 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.0067 15.9 0.0 0.008 15.6 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.0098 15.4 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family DUF4180 PF13788.6 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.036 14.0 0.0 0.043 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4180) RB_A PF01858.17 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.045 13.6 0.0 0.045 13.6 0.0 1.1 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain TniB PF05621.11 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.051 13.0 0.0 0.055 12.9 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein T2SSE PF00437.20 NODE_69277_length_228_cov_39.336788_g61336_i0reverse_frame_2 - 0.12 11.4 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein Sec8_exocyst PF04048.14 NODE_69271_length_228_cov_44.414508_g61330_i0reverse_frame_2 - 0.14 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain DUF5534 PF17686.1 NODE_69270_length_228_cov_44.590674_g61329_i0reverse_frame_2 - 0.00072 19.9 0.2 0.00079 19.7 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5534) Asp_Arg_Hydrox PF05118.15 NODE_69268_length_228_cov_47.243523_g61327_i0reverse_frame_3 - 8.6e-14 51.7 0.1 1.1e-13 51.3 0.1 1.2 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase OEP PF02321.18 NODE_69266_length_228_cov_48.430052_g61325_i0reverse_frame_3 - 0.0038 17.1 4.1 0.0046 16.8 4.1 1.0 1 0 0 1 1 1 1 Outer membrane efflux protein Citrate_bind PF16114.5 NODE_69266_length_228_cov_48.430052_g61325_i0reverse_frame_3 - 0.053 13.0 0.1 0.053 13.0 0.1 1.2 1 0 0 1 1 1 0 ATP citrate lyase citrate-binding Toprim_C_rpt PF13368.6 NODE_69266_length_228_cov_48.430052_g61325_i0reverse_frame_3 - 0.29 11.2 2.6 0.52 10.3 2.6 1.7 1 1 0 1 1 1 0 Topoisomerase C-terminal repeat DUF2547 PF10818.8 NODE_69265_length_228_cov_48.911917_g61324_i0forward_frame_2 - 0.14 13.1 0.1 0.17 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) DZR PF12773.7 NODE_69264_length_228_cov_49.290155_g61323_i0reverse_frame_2 - 0.36 10.9 8.7 3.9 7.6 7.1 2.1 1 1 1 2 2 2 0 Double zinc ribbon zf-UDP PF14569.6 NODE_69264_length_228_cov_49.290155_g61323_i0reverse_frame_2 - 0.7 10.1 6.9 7.3 6.8 0.2 2.1 1 1 1 2 2 2 0 Zinc-binding RING-finger Oxidored_q5_N PF01059.17 NODE_69261_length_228_cov_54.725389_g61320_i0forward_frame_3 - 0.026 14.6 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Ydc2-catalyt PF09159.10 NODE_69260_length_228_cov_55.626943_g61319_i0forward_frame_2 - 0.18 11.5 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 Gliadin PF13016.6 NODE_69259_length_228_cov_56.544041_g61318_i0reverse_frame_3 - 0.08 13.4 1.2 0.09 13.2 1.2 1.1 1 0 0 1 1 1 0 Cys-rich Gliadin N-terminal VHS PF00790.19 NODE_69258_length_228_cov_56.932642_g61317_i0reverse_frame_3 - 0.023 14.5 0.4 0.025 14.4 0.4 1.1 1 0 0 1 1 1 0 VHS domain KinB_sensor PF16767.5 NODE_69255_length_228_cov_60.554404_g61314_i0reverse_frame_2 - 0.047 14.1 0.0 0.048 14.1 0.0 1.1 1 0 0 1 1 1 0 Sensor domain of alginate biosynthesis sensor protein KinB DUF5319 PF17252.2 NODE_69254_length_228_cov_61.740933_g61313_i0reverse_frame_2 - 1.2 9.4 2.8 16 5.7 0.1 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5319) DDT PF02791.17 NODE_69254_length_228_cov_61.740933_g61313_i0forward_frame_3 - 0.023 15.0 2.1 0.031 14.6 2.1 1.3 1 0 0 1 1 1 0 DDT domain DUF1280 PF06918.14 NODE_69254_length_228_cov_61.740933_g61313_i0forward_frame_2 - 0.0045 16.6 0.5 0.0047 16.5 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1280) Sm_like PF16243.5 NODE_69253_length_228_cov_62.305699_g61312_i0reverse_frame_3 - 0.09 12.9 0.2 0.37 11.0 0.2 1.9 1 1 0 1 1 1 0 Sm_like domain Replicase PF03090.17 NODE_69249_length_228_cov_66.626943_g61308_i0forward_frame_3 - 0.062 13.1 0.0 0.065 13.1 0.0 1.1 1 0 0 1 1 1 0 Replicase family V-set_2 PF15910.5 NODE_69245_length_228_cov_69.663212_g61304_i0reverse_frame_3 - 0.0062 16.6 0.7 0.0067 16.5 0.7 1.1 1 0 0 1 1 1 1 ICOS V-set domain DUF3199 PF11436.8 NODE_69245_length_228_cov_69.663212_g61304_i0forward_frame_3 - 0.0041 17.1 0.1 0.0046 17.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3199) E_raikovi_mat PF06360.11 NODE_69244_length_228_cov_69.932642_g61303_i0reverse_frame_3 - 0.035 14.5 0.8 0.035 14.5 0.8 1.5 2 0 0 2 2 2 0 Euplotes raikovi mating pheromone CoA_binding_2 PF13380.6 NODE_69238_length_228_cov_110.512953_g61297_i0reverse_frame_2 - 0.15 12.6 0.0 0.18 12.3 0.0 1.1 1 0 0 1 1 1 0 CoA binding domain MORN PF02493.20 NODE_69238_length_228_cov_110.512953_g61297_i0forward_frame_2 - 0.00056 19.6 1.6 0.0014 18.4 0.4 2.1 2 0 0 2 2 2 1 MORN repeat S1-P1_nuclease PF02265.16 NODE_69232_length_228_cov_138.227979_g61291_i0reverse_frame_2 - 4.5e-09 36.5 0.0 5.1e-09 36.3 0.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Oxidored_q5_N PF01059.17 NODE_69232_length_228_cov_138.227979_g61291_i0forward_frame_3 - 0.066 13.3 2.7 0.085 12.9 2.7 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus GCM PF03615.15 NODE_69232_length_228_cov_138.227979_g61291_i0forward_frame_2 - 0.029 14.2 0.0 0.036 14.0 0.0 1.1 1 0 0 1 1 1 0 GCM motif protein Hydrophobin_2 PF06766.11 NODE_69227_length_228_cov_208.512953_g61286_i0reverse_frame_2 - 0.024 14.6 0.8 0.024 14.6 0.8 2.1 2 0 0 2 2 2 0 Fungal hydrophobin She9_MDM33 PF05546.11 NODE_69220_length_228_cov_337.041451_g61279_i0reverse_frame_3 - 0.025 14.4 0.2 0.03 14.1 0.2 1.0 1 0 0 1 1 1 0 She9 / Mdm33 family Med2 PF11214.8 NODE_69220_length_228_cov_337.041451_g61279_i0reverse_frame_3 - 0.033 14.3 0.2 0.037 14.2 0.2 1.2 1 0 0 1 1 1 0 Mediator complex subunit 2 ARL17 PF15840.5 NODE_69218_length_228_cov_432.544041_g61277_i0reverse_frame_3 - 0.041 14.3 0.1 0.06 13.7 0.1 1.4 1 0 0 1 1 1 0 ADP-ribosylation factor-like protein 17 DUF1476 PF07345.11 NODE_69217_length_228_cov_907.683938_g61276_i0forward_frame_2 - 0.097 13.1 0.4 4 7.9 0.0 2.1 1 1 1 2 2 2 0 ATPase inhibitor subunit zeta Thioredoxin_3 PF13192.6 ORF99907 - 0.014 15.4 0.0 0.022 14.8 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin domain PEGSRP PF07623.11 ORF99821 - 3.8 7.4 8.5 4.8 7.1 0.9 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1584) ATXN-1_C PF12547.8 ORF99277 - 0.11 12.9 1.9 0.24 11.8 1.9 1.5 1 0 0 1 1 1 0 Capicua transcriptional repressor modulator BsuBI_PstI_RE PF06616.11 ORF98562 - 0.066 12.5 0.0 0.073 12.4 0.0 1.1 1 0 0 1 1 1 0 BsuBI/PstI restriction endonuclease domain Glyco_hydro_67C PF07477.12 ORF97698 - 0.12 11.8 1.2 0.14 11.7 1.2 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 C-terminus FGFR3_TM PF18123.1 ORF97587 - 3.6 7.2 12.0 1.1 8.8 2.4 2.4 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain ATP-synt_10 PF05176.14 ORF97307 - 0.17 11.1 0.1 0.18 11.0 0.1 1.0 1 0 0 1 1 1 0 ATP10 protein DUF4306 PF14154.6 ORF96644 - 0.064 13.4 0.1 0.076 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4306) L31 PF09784.9 ORF95432 - 0.02 15.3 1.1 0.023 15.1 1.1 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 Img2 PF05046.14 ORF95432 - 0.033 14.5 0.1 0.04 14.2 0.1 1.3 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) IBV_3B PF03622.13 ORF9504 - 0.0038 17.3 0.1 0.0046 17.1 0.1 1.3 1 1 0 1 1 1 1 IBV 3B protein SLIDE PF09111.10 ORF94208 - 0.025 14.6 0.1 0.029 14.4 0.1 1.1 1 0 0 1 1 1 0 SLIDE Psm4 PF17063.5 ORF93767 - 1.5 9.6 7.2 2.3 9.0 0.3 3.2 2 1 1 3 3 3 0 Phenol-soluble modulin alpha 4 peptide TPP_enzyme_N PF02776.18 ORF93189 - 0.13 11.9 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Form-deh_trans PF09163.11 ORF92956 - 0.017 14.9 0.0 2.6 7.9 0.1 2.1 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Sulfotransfer_1 PF00685.27 ORF92390 - 0.039 13.4 0.6 0.042 13.3 0.6 1.0 1 0 0 1 1 1 0 Sulfotransferase domain HeLo PF14479.6 ORF92306 - 0.032 14.1 0.0 0.042 13.7 0.0 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation ENOD40 PF08247.11 ORF92262 - 0.022 14.7 0.9 0.022 14.7 0.9 2.9 3 0 0 3 3 3 0 ENOD40 protein GHMP_kinases_N PF00288.26 ORF91648 - 0.094 13.0 0.2 0.12 12.6 0.2 1.2 1 0 0 1 1 1 0 GHMP kinases N terminal domain TMC PF07810.13 ORF90773 - 0.02 15.4 1.7 0.022 15.3 0.8 1.5 1 1 0 1 1 1 0 TMC domain UPF0060 PF02694.15 ORF90477 - 0.027 14.7 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family Cys_Knot_tox PF17486.2 ORF90407 - 0.082 13.1 3.7 0.1 12.8 3.7 1.2 1 0 0 1 1 1 0 Cystine knot toxins SH3_10 PF17902.1 ORF90246 - 0.072 13.2 0.4 0.11 12.6 0.3 1.5 1 1 0 1 1 1 0 SH3 domain DUF4312 PF14189.6 ORF90093 - 0.039 13.9 1.3 0.045 13.8 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) Fumerase PF05681.14 ORF88484 - 0.00037 20.0 0.0 0.00039 19.9 0.0 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) MCPVI PF02993.14 ORF88316 - 0.047 13.5 0.9 0.053 13.4 0.9 1.1 1 0 0 1 1 1 0 Minor capsid protein VI Ribosomal_S18 PF01084.20 ORF88054 - 7.5e-25 86.9 0.5 9.8e-25 86.5 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein S18 Rhodanese PF00581.20 ORF87838 - 9.9e-08 32.5 0.0 1.1e-07 32.4 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain PDR_CDR PF06422.12 ORF87692 - 5.5 7.0 8.6 9.8 6.2 8.5 1.7 1 1 0 1 1 1 0 CDR ABC transporter UXS1_N PF11803.8 ORF86669 - 0.029 14.7 0.2 0.074 13.4 0.0 1.7 1 1 1 2 2 2 0 UDP-glucuronate decarboxylase N-terminal DUF4713 PF15831.5 ORF86575 - 7.4 7.1 14.2 11 6.6 14.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) RCC1_2 PF13540.6 ORF86421 - 5.7e-05 22.8 2.7 0.088 12.6 0.2 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat SIS_2 PF13580.6 ORF86421 - 0.0033 17.4 1.5 0.041 13.9 0.3 2.0 1 1 1 2 2 2 2 SIS domain K_channel_TID PF07941.11 ORF86421 - 1.5 9.3 4.7 1.8 9.1 3.2 1.8 1 1 1 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain Dpy-30 PF05186.13 ORF86383 - 1.1e-14 53.8 0.6 1.4e-14 53.5 0.6 1.1 1 0 0 1 1 1 1 Dpy-30 motif Harakiri PF15196.6 ORF86014 - 0.011 16.1 2.2 0.013 16.0 1.7 1.4 1 1 0 1 1 1 0 Activator of apoptosis harakiri C1_2 PF03107.16 ORF85760 - 0.12 12.7 2.6 9.5 6.6 2.6 2.3 1 1 0 1 1 1 0 C1 domain MCU PF04678.13 ORF85345 - 0.93 9.6 4.4 0.96 9.5 4.4 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter DUF2427 PF10348.9 ORF85074 - 0.00094 18.9 1.6 0.0013 18.5 1.6 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF2427) Pep1_7 PF17232.2 ORF84198 - 0.16 12.4 0.3 0.23 12.0 0.3 1.2 1 0 0 1 1 1 0 Elicitor peptide 1-7 DUF3931 PF13082.6 ORF83950 - 0.1 12.8 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3931) COA2 PF17051.5 ORF8385 - 0.0054 16.8 0.1 0.0065 16.5 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase assembly factor 2 zf-CCHC_6 PF15288.6 ORF81830 - 0.027 14.3 0.8 0.027 14.3 0.8 1.7 2 1 0 2 2 2 0 Zinc knuckle TOBE_2 PF08402.10 ORF81645 - 6.6e-16 58.3 0.0 7.5e-16 58.1 0.0 1.0 1 0 0 1 1 1 1 TOBE domain TOBE_3 PF12857.7 ORF81645 - 0.046 13.6 0.0 0.072 13.0 0.0 1.4 1 1 0 1 1 1 0 TOBE-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks360.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks360.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks360.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks360.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:03 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Methyltrans_SAM PF10672.9 ORF8108 - 0.013 14.7 0.0 0.015 14.5 0.0 1.0 1 0 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase Ank PF00023.30 ORF8108 - 0.088 13.3 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 Ankyrin repeat Rapsyn_N PF10579.9 ORF81058 - 0.14 12.3 0.2 9.6 6.4 0.0 2.1 2 0 0 2 2 2 0 Rapsyn N-terminal myristoylation and linker region DUF4202 PF13875.6 ORF80921 - 0.0005 20.0 0.6 0.00057 19.8 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4202) DUF5449 PF17528.2 ORF80921 - 0.012 15.4 0.2 0.014 15.2 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5449) DUF413 PF04219.12 ORF80921 - 0.082 12.9 0.8 0.11 12.5 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function, DUF DUF1897 PF09005.10 ORF80202 - 0.18 11.3 0.1 0.27 10.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1897) DHHC PF01529.20 ORF79995 - 5e-20 72.0 13.6 6.1e-20 71.7 13.6 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase Transglut_core3 PF13471.6 ORF79995 - 0.034 14.0 0.3 0.038 13.9 0.3 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily QueC PF06508.13 ORF79995 - 0.14 11.6 2.9 0.16 11.5 2.9 1.1 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Humanin PF15040.6 ORF79183 - 0.062 12.7 0.2 0.1 12.1 0.2 1.3 1 0 0 1 1 1 0 Humanin family Herpes_glycop PF01528.16 ORF78873 - 0.074 11.9 0.1 0.074 11.9 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein M ATG22 PF11700.8 ORF78873 - 0.09 11.4 0.6 0.09 11.4 0.6 1.1 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like PC4 PF02229.16 ORF7864 - 4.5e-20 71.0 0.2 5.5e-20 70.7 0.2 1.1 1 0 0 1 1 1 1 Transcriptional Coactivator p15 (PC4) ICMT PF04140.14 ORF77661 - 0.049 14.1 0.8 0.057 13.9 0.8 1.2 1 0 0 1 1 1 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Glyco_hydro_67C PF07477.12 ORF77123 - 0.12 11.8 1.2 0.14 11.7 1.2 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 C-terminus HeLo PF14479.6 ORF7700 - 0.032 14.1 0.0 0.042 13.7 0.0 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation YbhQ PF11076.8 ORF76548 - 0.018 15.0 0.3 0.02 14.9 0.3 1.1 1 0 0 1 1 1 0 Putative inner membrane protein YbhQ CRT-like PF08627.10 ORF76548 - 0.024 13.6 0.9 0.025 13.5 0.9 1.0 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like LrgA PF03788.14 ORF75910 - 0.065 13.2 0.0 0.065 13.2 0.0 1.1 1 0 0 1 1 1 0 LrgA family Sugar_tr PF00083.24 ORF75448 - 5.1e-06 25.6 0.2 5.3e-06 25.6 0.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter Spo0A_C PF08769.11 ORF75198 - 0.042 13.9 0.0 0.056 13.5 0.0 1.2 1 0 0 1 1 1 0 Sporulation initiation factor Spo0A C terminal Phe_ZIP PF08916.11 ORF74459 - 0.017 15.8 2.4 2.2 9.1 0.4 2.1 2 0 0 2 2 2 0 Phenylalanine zipper BPD_transp_1 PF00528.22 ORF74003 - 9.2e-08 32.0 1.5 9.8e-08 31.9 1.5 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DeoRC PF00455.22 ORF72767 - 1.9e-10 40.9 0.5 2.3e-10 40.7 0.5 1.1 1 0 0 1 1 1 1 DeoR C terminal sensor domain DPRP PF04244.13 ORF7219 - 0.0032 17.3 0.2 0.0034 17.3 0.2 1.0 1 0 0 1 1 1 1 Deoxyribodipyrimidine photo-lyase-related protein TRI12 PF06609.13 ORF71934 - 0.13 10.7 0.1 0.13 10.6 0.1 1.0 1 0 0 1 1 1 0 Fungal trichothecene efflux pump (TRI12) MBOAT PF03062.19 ORF70944 - 1.2e-17 64.4 12.3 1.3e-17 64.2 12.3 1.0 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family ATP-synt_C PF00137.21 ORF70314 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF70314 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 CLAMP PF14769.6 ORF70077 - 0.0077 16.7 0.1 0.0082 16.6 0.1 1.1 1 0 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 Dexa_ind PF15198.6 ORF70006 - 0.087 12.9 0.0 0.087 12.9 0.0 1.2 1 0 0 1 1 1 0 Dexamethasone-induced DUF4801 PF16059.5 ORF69424 - 0.35 10.9 6.4 0.48 10.4 6.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) CBM_5_12 PF02839.14 ORF6931 - 0.064 13.9 1.7 0.11 13.1 0.1 2.1 2 0 0 2 2 2 0 Carbohydrate binding domain DUF3844 PF12955.7 ORF69171 - 0.021 14.9 0.1 0.023 14.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) TMEM95 PF15203.6 ORF69171 - 0.023 14.3 0.1 0.023 14.3 0.1 1.1 1 0 0 1 1 1 0 TMEM95 family CDC13_N PF16853.5 ORF68985 - 0.07 12.6 0.5 0.076 12.5 0.5 1.0 1 0 0 1 1 1 0 Cell division control protein 13 N-terminus Herpes_gI PF01688.17 ORF67072 - 0.075 12.9 0.4 0.13 12.2 0.4 1.4 1 1 0 1 1 1 0 Alphaherpesvirus glycoprotein I GBP_repeat PF02526.14 ORF65325 - 0.027 14.2 0.2 0.052 13.3 0.2 1.4 1 0 0 1 1 1 0 Glycophorin-binding protein FAM117 PF15388.6 ORF64604 - 0.009 15.5 0.5 0.009 15.5 0.5 1.0 1 0 0 1 1 1 1 Protein Family FAM117 RNA_pol_Rpb8 PF03870.15 ORF6447 - 0.17 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb8 Neurensin PF14927.6 ORF63209 - 0.11 12.1 2.4 0.13 11.9 2.4 1.1 1 0 0 1 1 1 0 Neurensin Vac14_Fig4_bd PF11916.8 ORF63209 - 0.31 10.7 3.2 0.34 10.6 3.2 1.1 1 0 0 1 1 1 0 Vacuolar protein 14 C-terminal Fig4p binding PSGP PF07276.11 ORF63205 - 1.2 9.6 3.4 3 8.4 0.4 2.2 2 0 0 2 2 2 0 Apopolysialoglycoprotein (PSGP) Hydrophob_seed PF14547.6 ORF62105 - 0.01 16.0 0.4 0.012 15.8 0.4 1.1 1 0 0 1 1 1 0 Hydrophobic seed protein Lipase_3 PF01764.25 ORF61689 - 6.8e-05 22.8 0.0 7.6e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_5 PF12695.7 ORF61689 - 0.0097 15.7 0.0 0.0097 15.7 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.7 ORF61689 - 0.044 14.4 0.0 0.044 14.4 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF676 PF05057.14 ORF61689 - 0.093 12.2 0.0 0.093 12.2 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Abhydrolase_1 PF00561.20 ORF61689 - 0.12 12.0 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF61689 - 0.17 11.1 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Serine aminopeptidase, S33 VPS28 PF03997.12 ORF61686 - 0.16 11.6 0.0 0.18 11.5 0.0 1.0 1 0 0 1 1 1 0 VPS28 protein GAS PF13851.6 ORF60922 - 0.0039 16.6 6.9 0.0055 16.1 6.9 1.3 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding Helo_like_N PF17111.5 ORF60922 - 0.0093 15.4 0.8 0.55 9.6 0.2 2.0 1 1 1 2 2 2 1 Fungal N-terminal domain of STAND proteins DUF4407 PF14362.6 ORF60922 - 0.0099 15.3 0.3 0.011 15.1 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) BRE1 PF08647.11 ORF60922 - 0.01 15.9 6.4 0.013 15.6 6.4 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase Prefoldin PF02996.17 ORF60922 - 0.025 14.5 3.6 1.9 8.4 0.2 2.0 2 0 0 2 2 2 0 Prefoldin subunit Ribosomal_L29 PF00831.23 ORF60922 - 0.036 14.0 3.3 0.16 12.0 3.0 2.1 1 1 0 1 1 1 0 Ribosomal L29 protein PCRF PF03462.18 ORF60922 - 0.046 13.6 1.5 0.15 11.9 1.5 1.7 1 1 0 1 1 1 0 PCRF domain Stealth_CR3 PF17102.5 ORF60922 - 0.053 13.4 0.0 0.079 12.9 0.0 1.3 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 TMF_TATA_bd PF12325.8 ORF60922 - 0.064 13.5 2.2 0.083 13.1 2.2 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Val_tRNA-synt_C PF10458.9 ORF60922 - 0.091 13.1 5.3 19 5.7 5.3 2.4 1 1 0 1 1 1 0 Valyl tRNA synthetase tRNA binding arm Snapin_Pallidin PF14712.6 ORF60922 - 0.12 12.9 3.9 0.16 12.4 3.9 1.2 1 0 0 1 1 1 0 Snapin/Pallidin Com_YlbF PF06133.11 ORF60922 - 0.13 12.9 5.0 0.25 12.0 5.0 1.5 1 1 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA CREPT PF16566.5 ORF60922 - 0.16 12.1 3.3 0.26 11.5 3.3 1.3 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour IFP_35_N PF07334.13 ORF60922 - 0.89 9.7 4.8 4.6 7.4 1.3 2.1 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Prefoldin_2 PF01920.20 ORF60922 - 1.3 9.0 8.3 6.4 6.8 1.2 2.1 1 1 0 2 2 2 0 Prefoldin subunit KTSC PF13619.6 ORF60892 - 0.11 12.4 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 KTSC domain NRDE-2 PF08424.10 ORF60634 - 0.039 13.1 0.2 0.04 13.0 0.2 1.0 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference FXa_inhibition PF14670.6 ORF6015 - 0.025 14.9 4.8 0.13 12.6 4.8 2.1 1 1 0 1 1 1 0 Coagulation Factor Xa inhibitory site Fusion_gly PF00523.18 ORF6015 - 0.034 12.4 1.4 0.038 12.2 1.4 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0 DUF2142 PF09913.9 ORF60076 - 0.036 12.9 0.5 0.043 12.7 0.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) DUF835 PF05763.12 ORF60076 - 0.06 13.1 2.4 0.17 11.6 0.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF835) FGFR3_TM PF18123.1 ORF60024 - 3.6 7.2 12.0 1.1 8.8 2.4 2.4 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain DUF3155 PF11352.8 ORF59936 - 0.057 13.8 0.0 0.065 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3155) Rad51 PF08423.11 ORF59773 - 0.15 11.3 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Rad51 CRISPR_Cas9_WED PF18061.1 ORF59664 - 0.057 13.5 3.5 0.11 12.5 3.5 1.5 1 1 0 1 1 1 0 CRISPR-Cas9 WED domain SPG48 PF14764.6 ORF59664 - 0.07 13.6 0.1 0.079 13.4 0.1 1.1 1 0 0 1 1 1 0 AP-5 complex subunit, vesicle trafficking Pox_F15 PF04596.12 ORF59554 - 0.022 14.5 0.4 0.026 14.3 0.4 1.2 1 0 0 1 1 1 0 Poxvirus protein F15 DUF3080 PF11279.8 ORF59303 - 0.061 12.5 0.1 0.072 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3080) ICMT PF04140.14 ORF59161 - 0.049 14.1 0.8 0.057 13.9 0.8 1.2 1 0 0 1 1 1 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family MerT PF02411.15 ORF58580 - 0.064 13.3 1.1 0.075 13.1 1.1 1.1 1 0 0 1 1 1 0 MerT mercuric transport protein MMR_HSR1_C PF08438.10 ORF58360 - 0.054 14.1 0.0 0.058 14.0 0.0 1.1 1 0 0 1 1 1 0 GTPase of unknown function C-terminal DUF4924 PF16271.5 ORF58360 - 0.07 13.1 0.1 0.075 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4924) DUF1509 PF07420.11 ORF58307 - 0.093 11.7 1.0 0.11 11.5 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) DUF1188 PF06690.11 ORF58111 - 0.049 13.2 0.2 0.053 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) TRM13 PF05206.14 ORF58111 - 0.096 12.2 0.1 0.11 12.0 0.1 1.0 1 0 0 1 1 1 0 Methyltransferase TRM13 Sugar_tr PF00083.24 ORF57813 - 5.1e-06 25.6 0.2 5.3e-06 25.6 0.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter EF-hand_6 PF13405.6 ORF56597 - 3.1e-11 42.2 1.0 4.4e-08 32.4 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF56597 - 3.7e-10 38.6 2.4 6.6e-06 25.3 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF56597 - 2.4e-09 37.5 0.3 3.4e-09 37.0 0.3 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF56597 - 1.4e-08 34.4 1.1 4.2e-07 29.7 0.2 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF56597 - 5.4e-06 26.6 0.0 8e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF56597 - 2.3e-05 23.7 2.6 0.011 15.2 0.1 2.5 2 0 0 2 2 2 2 EF hand EF-hand_14 PF17959.1 ORF56597 - 0.025 14.9 0.0 0.033 14.5 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain Toxin_34 PF08396.10 ORF56480 - 0.26 12.1 7.8 1.9 9.3 8.1 1.9 1 1 1 2 2 2 0 Spider toxin omega agatoxin/Tx1 family DUF4847 PF16139.5 ORF55303 - 0.037 13.9 0.1 0.041 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4847) Toxin_16 PF07945.11 ORF55054 - 0.0034 17.2 3.5 0.0066 16.3 3.5 1.4 1 0 0 1 1 1 1 Janus-atracotoxin NP1-WLL PF11733.8 ORF54922 - 1.9 8.2 5.6 2.1 8.0 5.6 1.1 1 0 0 1 1 1 0 Non-capsid protein NP1 QueT PF06177.11 ORF54338 - 0.037 14.4 0.3 0.041 14.2 0.3 1.1 1 0 0 1 1 1 0 QueT transporter Ank_5 PF13857.6 ORF54262 - 0.00064 20.0 0.1 0.0029 17.9 0.0 1.8 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF54262 - 0.0014 19.2 0.6 0.026 15.1 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF54262 - 0.0067 17.0 0.0 0.0082 16.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) DUF1858 PF08984.11 ORF54262 - 0.062 13.5 0.0 0.1 12.8 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1858) PKcGMP_CC PF16808.5 ORF5375 - 0.00022 21.0 4.1 0.00035 20.4 4.1 1.3 1 0 0 1 1 1 1 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF2117 PF09890.9 ORF5375 - 0.027 14.0 0.1 0.028 13.9 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2117) DUF5562 PF17717.1 ORF53548 - 0.096 12.7 0.3 0.12 12.3 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5562) RD3 PF14473.6 ORF52835 - 0.018 14.9 0.1 0.019 14.8 0.1 1.1 1 0 0 1 1 1 0 RD3 protein Reo_sigmaC_M PF17750.1 ORF52802 - 0.051 13.4 5.1 0.073 12.9 0.0 2.3 2 0 0 2 2 2 0 Reovirus sigma C capsid protein triple beta spiral Cyc-maltodext_N PF09087.11 ORF52728 - 0.089 13.1 1.4 0.091 13.1 1.4 1.1 1 0 0 1 1 1 0 Cyclomaltodextrinase, N-terminal WBP-1 PF11669.8 ORF52728 - 0.11 13.1 0.1 0.12 13.0 0.1 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 HigB_toxin PF09907.9 ORF52569 - 0.049 13.8 0.6 0.31 11.3 0.1 1.9 2 0 0 2 2 2 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system Gamma-thionin PF00304.20 ORF52083 - 0.17 12.1 5.3 0.23 11.7 5.3 1.2 1 0 0 1 1 1 0 Gamma-thionin family REC104 PF17378.2 ORF5201 - 0.026 14.3 0.6 0.029 14.2 0.6 1.0 1 0 0 1 1 1 0 Meiotic recombination protein REC104 DUF5087 PF17006.5 ORF51926 - 0.036 13.6 1.5 0.039 13.5 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5087) GUB_WAK_bind PF13947.6 ORF51433 - 0.028 15.2 0.2 0.03 15.1 0.2 1.1 1 0 0 1 1 1 0 Wall-associated receptor kinase galacturonan-binding CH_2 PF06294.11 ORF50166 - 1.4e-20 73.2 0.5 1.5e-20 73.1 0.5 1.0 1 0 0 1 1 1 1 CH-like domain in sperm protein CAMSAP_CH PF11971.8 ORF50166 - 3.7e-13 49.1 0.1 4.2e-13 48.9 0.1 1.1 1 0 0 1 1 1 1 CAMSAP CH domain CH PF00307.31 ORF50166 - 0.013 15.7 0.1 0.013 15.7 0.1 1.1 1 0 0 1 1 1 0 Calponin homology (CH) domain RsbRD_N PF14361.6 ORF50166 - 0.092 13.4 0.0 0.092 13.4 0.0 1.1 1 0 0 1 1 1 0 RsbT co-antagonist protein rsbRD N-terminal domain PknG_rubred PF16919.5 ORF50095 - 0.0045 17.1 0.1 0.005 17.0 0.1 1.1 1 0 0 1 1 1 1 Protein kinase G rubredoxin domain Wzy_C_2 PF11846.8 ORF49932 - 0.15 12.0 0.0 0.16 11.9 0.0 1.0 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal DUF236 PF03057.14 ORF48875 - 0.14 12.1 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 DUF236 repeat DUF3739 PF12545.8 ORF48357 - 0.073 13.6 0.0 0.089 13.3 0.0 1.0 1 0 0 1 1 1 0 Filamentous haemagglutinin family outer membrane protein Myelin_MBP PF01669.17 ORF4759 - 0.042 14.5 0.1 0.05 14.2 0.1 1.0 1 0 0 1 1 1 0 Myelin basic protein Acetyltransf_1 PF00583.25 ORF47534 - 2.1e-10 40.9 0.2 2.4e-10 40.6 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF47534 - 6.1e-07 29.8 0.2 7.4e-07 29.5 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF47534 - 1e-06 28.7 0.0 1e-06 28.7 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF47534 - 9.9e-05 22.4 0.0 0.00013 22.0 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 ORF47534 - 0.00012 22.0 0.0 0.00015 21.7 0.0 1.1 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF47534 - 0.023 14.8 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 ORF47534 - 0.03 13.9 0.0 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_4 PF13420.7 ORF47534 - 0.04 14.1 0.0 0.042 14.0 0.0 1.0 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 ORF47534 - 0.14 12.8 0.0 0.16 12.6 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Herpes_IE1 PF07340.11 ORF47202 - 0.29 10.0 1.3 0.29 10.0 1.3 1.0 1 0 0 1 1 1 0 Cytomegalovirus IE1 protein Nucleoporin_N PF08801.11 ORF47014 - 0.025 13.3 0.2 0.025 13.3 0.2 1.0 1 0 0 1 1 1 0 Nup133 N terminal like NRDE-2 PF08424.10 ORF46670 - 0.04 13.0 0.2 0.046 12.8 0.2 1.0 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference FKS1_dom1 PF14288.6 ORF45133 - 0.023 15.1 1.0 0.025 14.9 1.0 1.1 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 T2SSB PF16537.5 ORF45133 - 0.12 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Type II secretion system protein B Rhodanese_C PF12368.8 ORF44912 - 0.31 11.4 11.0 2.1 8.8 11.0 1.9 1 1 0 1 1 1 0 Rhodanase C-terminal TMEM71 PF15121.6 ORF44870 - 0.089 12.5 0.1 0.089 12.5 0.1 1.2 1 0 0 1 1 1 0 TMEM71 protein family ATP-synt_ab PF00006.25 ORF44509 - 3.1e-16 59.7 0.1 3.3e-16 59.6 0.1 1.0 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain RNF220 PF15926.5 ORF44276 - 0.4 10.3 8.3 0.42 10.2 8.3 1.0 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase RNF220 Staphostatin_B PF09023.10 ORF44165 - 0.069 13.2 0.2 0.15 12.2 0.1 1.5 1 1 0 1 1 1 0 Staphostatin B Ammonium_transp PF00909.21 ORF43601 - 0.14 10.8 0.0 0.17 10.6 0.0 1.1 1 0 0 1 1 1 0 Ammonium Transporter Family AAA_11 PF13086.6 ORF4325 - 0.056 13.2 0.0 0.056 13.2 0.0 1.0 1 0 0 1 1 1 0 AAA domain CAMP_factor PF07373.11 ORF41730 - 0.098 12.2 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 CAMP factor (Cfa) GPR15L PF15854.5 ORF41016 - 0.4 11.0 7.2 0.51 10.6 7.2 1.2 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 Calreticulin PF00262.18 ORF40857 - 0.15 10.9 0.7 0.15 10.9 0.7 1.1 1 0 0 1 1 1 0 Calreticulin family DUF2661 PF10860.8 ORF40697 - 0.019 15.1 0.8 0.022 14.8 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2661) MCM_OB PF17207.3 ORF3984 - 0.069 13.0 0.2 0.073 12.9 0.2 1.1 1 0 0 1 1 1 0 MCM OB domain FMP23 PF17315.2 ORF39679 - 0.074 13.2 0.1 0.09 12.9 0.1 1.2 1 0 0 1 1 1 0 Found in mitochondrial proteome Competence PF03772.16 ORF39101 - 0.0097 15.2 0.2 0.01 15.2 0.2 1.0 1 0 0 1 1 1 1 Competence protein PRIMA1 PF16101.5 ORF38923 - 0.11 12.6 5.3 0.13 12.3 5.3 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 EMG1 PF03587.14 ORF37679 - 0.13 11.9 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 EMG1/NEP1 methyltransferase DUF1414 PF07208.11 ORF37663 - 1.3e-24 85.9 0.8 1.8e-24 85.4 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1414) DUF1002 PF06207.11 ORF37663 - 0.058 12.9 0.2 0.063 12.8 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) DEAD_2 PF06733.15 ORF37663 - 0.072 12.7 0.0 0.075 12.7 0.0 1.0 1 0 0 1 1 1 0 DEAD_2 Vta1 PF04652.16 ORF37663 - 0.075 13.0 0.1 0.079 12.9 0.1 1.1 1 0 0 1 1 1 0 Vta1 like O_Spanin_T7 PF17531.2 ORF37663 - 0.29 11.2 1.3 4 7.6 1.0 2.1 2 0 0 2 2 2 0 outer-membrane spanin sub-unit DUF3977 PF13122.6 ORF37661 - 0.016 15.4 0.2 0.021 15.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3977) BC10 PF06726.12 ORF37540 - 0.088 13.0 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Bladder cancer-related protein BC10 Ninjurin PF04923.12 ORF37309 - 0.013 15.5 0.1 0.015 15.2 0.1 1.1 1 0 0 1 1 1 0 Ninjurin Peptidase_M24 PF00557.24 ORF35970 - 2.3e-06 27.5 0.0 2.5e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF1499 PF07386.11 ORF35914 - 1.2e-07 32.3 0.0 1.5e-07 31.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1499) FPN1 PF06963.12 ORF35905 - 0.033 12.8 0.0 0.039 12.5 0.0 1.0 1 0 0 1 1 1 0 Ferroportin1 (FPN1) adh_short_C2 PF13561.6 ORF35357 - 8.3e-09 35.3 0.0 9.9e-09 35.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase zf-MYND PF01753.18 ORF34651 - 0.017 15.2 2.9 0.1 12.7 0.8 2.1 2 0 0 2 2 2 0 MYND finger RRM_DME PF15628.6 ORF34027 - 0.12 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 RRM in Demeter Endotoxin_N PF03945.14 ORF31588 - 0.017 14.8 1.1 0.018 14.8 1.1 1.1 1 0 0 1 1 1 0 delta endotoxin, N-terminal domain Phage_TAC_12 PF12363.8 ORF31588 - 0.032 14.7 0.6 0.038 14.4 0.6 1.0 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC bZIP_1 PF00170.21 ORF31588 - 0.11 12.6 0.6 0.24 11.5 0.6 1.6 1 0 0 1 1 1 0 bZIP transcription factor DUF3021 PF11457.8 ORF31260 - 0.054 13.8 5.8 0.064 13.6 5.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) STAT1_TAZ2bind PF12162.8 ORF29871 - 0.012 15.2 0.6 0.023 14.2 0.6 1.5 1 0 0 1 1 1 0 STAT1 TAZ2 binding domain C1_2 PF03107.16 ORF2952 - 0.026 14.8 7.3 0.026 14.8 7.3 2.1 1 1 1 2 2 2 0 C1 domain Zn_Tnp_IS91 PF14319.6 ORF2952 - 0.11 12.6 0.5 0.11 12.6 0.5 2.0 1 1 1 2 2 2 0 Transposase zinc-binding domain zf-HIT PF04438.16 ORF2952 - 2.1 8.3 11.0 0.55 10.2 6.2 2.3 2 1 0 2 2 2 0 HIT zinc finger Zn-ribbon_8 PF09723.10 ORF2952 - 2.2 8.4 8.7 1.4 9.1 0.5 2.4 2 1 0 2 2 2 0 Zinc ribbon domain NPBW PF15180.6 ORF28445 - 0.068 13.0 0.8 0.11 12.4 0.7 1.5 1 1 1 2 2 2 0 Neuropeptides B and W Helicase_PWI PF18149.1 ORF2834 - 0.011 15.9 0.3 0.014 15.6 0.3 1.1 1 0 0 1 1 1 0 N-terminal helicase PWI domain CBM_5_12 PF02839.14 ORF28160 - 0.064 13.9 1.7 0.11 13.1 0.1 2.1 2 0 0 2 2 2 0 Carbohydrate binding domain UCR_hinge PF02320.16 ORF27934 - 0.059 13.6 1.8 0.092 13.0 1.0 1.7 1 1 1 2 2 2 0 Ubiquinol-cytochrome C reductase hinge protein MVP_shoulder PF11978.8 ORF27466 - 0.076 13.0 0.2 0.085 12.9 0.2 1.2 1 0 0 1 1 1 0 Shoulder domain DUF4922 PF16269.5 ORF27203 - 0.027 14.3 0.6 0.029 14.2 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4922) NCD3G PF07562.14 ORF27120 - 0.0041 17.1 0.1 0.0075 16.2 0.0 1.6 2 0 0 2 2 2 1 Nine Cysteines Domain of family 3 GPCR ERGIC_N PF13850.6 ORF26656 - 1.9e-14 53.7 0.0 2.2e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) K-cyclin_vir_C PF09080.10 ORF26656 - 0.061 13.8 0.1 0.075 13.5 0.1 1.2 1 0 0 1 1 1 0 K cyclin, C terminal DUF5527 PF17665.1 ORF26656 - 0.063 12.8 0.3 0.075 12.6 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5527) PrsW-protease PF13367.6 ORF25581 - 0.12 11.8 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 PrsW family intramembrane metalloprotease DUF639 PF04842.12 ORF24839 - 0.1 12.0 0.0 0.1 12.0 0.0 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) DUF4801 PF16059.5 ORF23624 - 0.35 10.9 6.4 0.48 10.4 6.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) DUF412 PF04217.13 ORF23511 - 0.02 14.8 0.1 0.021 14.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF412 ATP-synt_ab PF00006.25 ORF22728 - 3.1e-16 59.7 0.1 3.3e-16 59.6 0.1 1.0 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain HJURP_mid PF12346.8 ORF22016 - 0.047 14.2 3.2 4 7.9 0.3 2.0 2 0 0 2 2 2 0 Holliday junction recognition protein-associated repeat SPRR2 PF14820.6 ORF21777 - 0.037 14.1 0.2 0.051 13.7 0.2 1.3 1 0 0 1 1 1 0 Small proline-rich 2 Calponin PF00402.18 ORF19879 - 0.086 12.5 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 Calponin family repeat HGTP_anticodon2 PF12745.7 ORF19247 - 0.0053 16.3 0.2 0.0058 16.2 0.2 1.0 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs RseC_MucC PF04246.12 ORF1920 - 0.18 11.8 0.8 0.21 11.5 0.8 1.0 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC OAD_gamma PF04277.13 ORF18898 - 0.14 12.7 0.0 0.23 12.1 0.0 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain SAGA-Tad1 PF12767.7 ORF18800 - 0.091 12.5 0.0 0.093 12.5 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit Spo7 PF03907.13 ORF18784 - 0.064 12.7 0.1 0.066 12.7 0.1 1.1 1 0 0 1 1 1 0 Spo7-like protein Phenol_monoox PF04663.12 ORF17723 - 0.098 12.8 0.6 0.14 12.3 0.6 1.2 1 0 0 1 1 1 0 Phenol hydroxylase conserved region Flu_PB1 PF00602.17 ORF17619 - 0.048 11.8 3.1 0.048 11.8 3.1 1.0 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PB1 CfAFP PF05264.11 ORF17619 - 0.053 13.5 0.8 0.058 13.4 0.8 1.0 1 0 0 1 1 1 0 Choristoneura fumiferana antifreeze protein (CfAFP) Holin_BhlA PF10960.8 ORF17619 - 0.29 11.1 5.7 4.9 7.2 0.3 2.1 2 0 0 2 2 2 0 BhlA holin family Pet191_N PF10203.9 ORF17022 - 4.8e-11 42.8 1.2 4.8e-11 42.8 1.2 1.5 2 0 0 2 2 2 1 Cytochrome c oxidase assembly protein PET191 DUF4818 PF16089.5 ORF1697 - 0.012 16.1 1.4 0.013 16.0 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) TMEM173 PF15009.6 ORF1697 - 0.025 13.8 2.0 0.025 13.7 2.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 173 GPR15L PF15854.5 ORF1697 - 0.2 11.9 2.0 0.25 11.6 2.0 1.2 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 Vac7 PF12751.7 ORF1697 - 0.67 9.3 2.5 0.74 9.2 2.5 1.0 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 Dicer_dimer PF03368.14 ORF16633 - 0.02 15.1 0.1 0.026 14.7 0.1 1.3 1 0 0 1 1 1 0 Dicer dimerisation domain Glyco_hydro_99 PF16317.5 ORF16301 - 1.5e-15 57.2 0.2 1.6e-15 57.1 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 99 Glyco_tran_WbsX PF14307.6 ORF16301 - 0.0015 18.1 0.0 0.0021 17.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase WbsX Glyco_hydro_71 PF03659.14 ORF16301 - 0.051 12.4 0.3 0.053 12.3 0.3 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 71 Herpes_pp85 PF04637.12 ORF16219 - 3.6 5.9 4.1 4.1 5.7 4.1 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF3913 PF13052.6 ORF1611 - 0.015 15.6 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3913) ETF_QO PF05187.13 ORF152664 - 8.5e-29 99.7 2.8 9.6e-29 99.6 2.8 1.0 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_7 PF12838.7 ORF152664 - 0.0016 19.0 1.6 0.0021 18.6 1.6 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF152664 - 0.0026 17.9 1.0 0.0032 17.6 1.0 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF152664 - 0.0031 17.6 1.9 0.0046 17.1 1.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF152664 - 0.0098 16.4 1.0 0.012 16.1 1.0 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF152664 - 0.022 14.8 0.6 0.022 14.8 0.6 1.9 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 ORF152664 - 0.023 14.8 3.2 0.032 14.4 3.2 1.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF152664 - 0.036 14.1 2.2 0.053 13.6 0.7 1.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 ORF152664 - 0.25 11.9 3.5 0.43 11.2 1.4 2.0 2 0 0 2 2 2 0 4Fe-4S binding domain DUF1636 PF07845.11 ORF15245 - 0.0024 18.3 0.1 0.0036 17.7 0.0 1.3 1 1 0 2 2 2 1 Protein of unknown function (DUF1636) NPBW PF15180.6 ORF152149 - 0.068 13.0 0.8 0.11 12.4 0.7 1.5 1 1 1 2 2 2 0 Neuropeptides B and W Trp_leader2 PF08056.11 ORF151685 - 0.043 13.8 0.9 1.9 8.5 0.0 2.1 2 0 0 2 2 2 0 Tryptophan operon leader peptide SH3_10 PF17902.1 ORF151412 - 0.072 13.2 0.4 0.11 12.6 0.3 1.5 1 1 0 1 1 1 0 SH3 domain DUF3847 PF12958.7 ORF150100 - 0.14 12.3 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3847) MCH PF02289.16 ORF149994 - 0.2 10.9 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Cyclohydrolase (MCH) TFIIS_C PF01096.18 ORF149330 - 0.086 12.7 3.1 0.45 10.4 0.9 2.5 1 1 1 2 2 2 0 Transcription factor S-II (TFIIS) GEP5 PF17053.5 ORF149325 - 0.0016 18.3 0.5 0.0018 18.2 0.5 1.0 1 0 0 1 1 1 1 Genetic interactor of prohibitin 5 Hydrophob_seed PF14547.6 ORF149270 - 0.01 16.0 0.4 0.012 15.8 0.4 1.1 1 0 0 1 1 1 0 Hydrophobic seed protein Transposase_20 PF02371.16 ORF149020 - 0.073 13.4 0.3 0.1 12.9 0.3 1.3 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family Semialdhyde_dhC PF02774.18 ORF14833 - 0.066 13.3 0.0 0.073 13.1 0.0 1.1 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, dimerisation domain ATP-synt_C PF00137.21 ORF147886 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF147886 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 Pox_G7 PF05503.12 ORF14728 - 0.17 10.8 1.5 0.19 10.7 1.5 1.0 1 0 0 1 1 1 0 Poxvirus G7-like zf-ribbon_3 PF13248.6 ORF146979 - 1.6 8.3 7.6 8.2 6.0 0.2 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF146979 - 7.7 6.6 13.1 1.9 8.6 3.0 2.6 2 1 0 2 2 2 0 Transposase zinc-ribbon domain TMEM132D_C PF15706.5 ORF146810 - 0.028 14.2 0.0 0.036 13.9 0.0 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF2207 PF09972.9 ORF146800 - 0.75 8.5 5.0 0.75 8.5 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Sigma_reg_N PF13800.6 ORF146543 - 2.9 8.3 6.4 13 6.1 3.4 2.0 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF3847 PF12958.7 ORF14624 - 0.14 12.3 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3847) GYF_2 PF14237.6 ORF145627 - 2.3e-06 27.3 0.2 3.6e-05 23.5 0.0 2.1 2 0 0 2 2 2 1 GYF domain 2 RIH_assoc PF08454.11 ORF145199 - 0.031 14.1 0.3 0.033 14.0 0.3 1.1 1 0 0 1 1 1 0 RyR and IP3R Homology associated UPF0060 PF02694.15 ORF144382 - 0.027 14.7 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family Med11 PF10280.9 ORF143771 - 0.12 12.9 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 Mediator complex protein Elf1 PF05129.13 ORF14376 - 4.4e-11 42.7 0.0 5.8e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like zf-met PF12874.7 ORF14376 - 0.029 14.8 0.1 0.044 14.2 0.1 1.3 1 0 0 1 1 1 0 Zinc-finger of C2H2 type Pkinase PF00069.25 ORF143260 - 4.1e-08 32.9 0.0 4.2e-08 32.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Glyco_hydro_67C PF07477.12 ORF142363 - 0.12 11.8 1.2 0.14 11.7 1.2 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 C-terminus Adeno_E3_14_5 PF04834.12 ORF142226 - 0.097 13.2 0.0 0.11 13.1 0.0 1.1 1 0 0 1 1 1 0 Early E3 14.5 kDa protein DUF4818 PF16089.5 ORF14206 - 0.012 16.1 1.4 0.013 16.0 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) TMEM173 PF15009.6 ORF14206 - 0.025 13.8 2.0 0.025 13.7 2.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 173 GPR15L PF15854.5 ORF14206 - 0.2 11.9 2.0 0.25 11.6 2.0 1.2 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 Vac7 PF12751.7 ORF14206 - 0.67 9.3 2.5 0.74 9.2 2.5 1.0 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 Jas PF16135.5 ORF141806 - 0.067 13.4 0.0 0.083 13.1 0.0 1.1 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling Defensin_beta_2 PF13841.6 ORF141380 - 0.025 15.0 0.6 0.025 15.0 0.6 1.6 2 0 0 2 2 2 0 Beta defensin TcpE PF12648.7 ORF141119 - 0.38 11.3 4.4 0.41 11.2 4.4 1.2 1 0 0 1 1 1 0 TcpE family UL2 PF08196.11 ORF141119 - 1.8 8.6 6.4 0.75 9.8 1.3 2.2 1 1 1 2 2 2 0 UL2 protein Tektin PF03148.14 ORF141054 - 0.0013 17.6 3.4 0.0014 17.5 3.4 1.0 1 0 0 1 1 1 1 Tektin family CENP-F_leu_zip PF10473.9 ORF141054 - 0.0033 17.4 5.3 0.0043 17.1 5.3 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TMF_TATA_bd PF12325.8 ORF141054 - 0.0037 17.5 2.5 0.0045 17.2 2.5 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding HAP1_N PF04849.13 ORF141054 - 0.0068 15.7 3.2 0.0074 15.5 3.2 1.2 1 0 0 1 1 1 1 HAP1 N-terminal conserved region FapA PF03961.13 ORF141054 - 0.0073 15.0 2.2 0.0082 14.8 2.2 1.0 1 0 0 1 1 1 1 Flagellar Assembly Protein A Scaffolding_pro PF11418.8 ORF141054 - 0.0076 16.8 0.7 0.0084 16.6 0.7 1.1 1 0 0 1 1 1 1 Phi29 scaffolding protein GAS PF13851.6 ORF141054 - 0.0085 15.5 5.0 0.011 15.1 5.0 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding DUF2968 PF11180.8 ORF141054 - 0.0089 15.7 3.7 0.0095 15.6 3.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2968) APG6_N PF17675.1 ORF141054 - 0.009 16.5 2.6 0.01 16.3 2.6 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region DUF5082 PF16888.5 ORF141054 - 0.0092 16.3 3.0 0.013 15.8 3.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) DUF3450 PF11932.8 ORF141054 - 0.017 14.4 2.8 0.017 14.4 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1465 PF07323.12 ORF141054 - 0.019 14.8 1.0 0.033 14.0 0.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1465) Fib_alpha PF08702.10 ORF141054 - 0.019 15.1 3.7 0.021 15.0 3.7 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family ZapB PF06005.12 ORF141054 - 0.027 14.9 5.5 0.036 14.5 5.5 1.3 1 0 0 1 1 1 0 Cell division protein ZapB DUF724 PF05266.14 ORF141054 - 0.05 13.4 2.2 0.059 13.2 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) His_binding PF02098.16 ORF141054 - 0.063 13.3 0.3 0.067 13.2 0.3 1.1 1 0 0 1 1 1 0 Tick histamine binding protein FlaC_arch PF05377.11 ORF141054 - 0.082 13.3 2.9 0.34 11.3 3.0 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Macoilin PF09726.9 ORF141054 - 0.1 11.1 5.7 0.11 11.0 5.7 1.0 1 0 0 1 1 1 0 Macoilin family XhlA PF10779.9 ORF141054 - 0.21 11.8 4.1 0.29 11.4 2.9 1.7 1 1 1 2 2 2 0 Haemolysin XhlA DUF5320 PF17253.2 ORF141054 - 0.27 12.3 0.9 0.3 12.2 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5320) DivIC PF04977.15 ORF141054 - 0.91 9.3 8.0 3.7 7.4 7.6 2.0 1 1 0 1 1 1 0 Septum formation initiator GIT_CC PF16559.5 ORF141054 - 1.5 8.7 11.1 2.7 7.9 8.2 2.2 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor bZIP_2 PF07716.15 ORF141054 - 5.3 7.2 9.9 2.7 8.1 7.1 2.0 2 1 0 2 2 2 0 Basic region leucine zipper BMF PF15185.6 ORF140817 - 0.21 11.3 1.5 0.48 10.1 1.5 1.6 1 1 0 1 1 1 0 Bcl-2-modifying factor, apoptosis ICMT PF04140.14 ORF140272 - 0.049 14.1 0.8 0.057 13.9 0.8 1.2 1 0 0 1 1 1 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Mut7-C PF01927.16 ORF139163 - 0.019 15.1 0.9 0.02 15.0 0.9 1.0 1 0 0 1 1 1 0 Mut7-C RNAse domain Orthopox_B11R PF07033.11 ORF139163 - 0.13 12.1 1.8 0.29 10.9 1.8 1.7 1 1 0 1 1 1 0 Orthopoxvirus B11R protein Pkinase PF00069.25 ORF138831 - 6e-16 58.6 0.1 6.5e-16 58.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF138831 - 7.8e-09 35.2 0.1 8.4e-09 35.1 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF138831 - 0.00011 22.2 0.0 0.00011 22.2 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF138831 - 0.0011 18.6 0.1 0.0011 18.6 0.1 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase YrbL-PhoP_reg PF10707.9 ORF138831 - 0.0046 16.5 0.0 0.0053 16.3 0.0 1.1 1 0 0 1 1 1 1 PhoP regulatory network protein YrbL Kdo PF06293.14 ORF138831 - 0.013 14.9 0.0 0.013 14.8 0.0 1.0 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF138831 - 0.013 15.1 0.0 0.014 15.0 0.0 1.1 1 0 0 1 1 1 0 RIO1 family Pox_ser-thr_kin PF05445.11 ORF138831 - 0.022 13.7 0.1 0.022 13.7 0.1 1.0 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Conotoxin PF02950.17 ORF138468 - 0.071 14.1 0.9 0.087 13.8 0.9 1.1 1 0 0 1 1 1 0 Conotoxin DUF5018 PF16410.5 ORF138247 - 0.047 12.4 0.0 0.049 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5018) DUF5074 PF16819.5 ORF137929 - 0.093 12.8 0.2 0.096 12.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5074) ESAG1 PF03238.13 ORF137829 - 0.095 12.1 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 ESAG protein DUF1492 PF07374.11 ORF137757 - 0.079 13.1 1.1 0.13 12.5 1.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) RseC_MucC PF04246.12 ORF137270 - 0.017 15.1 3.3 0.02 14.8 3.3 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC IL4_i_Ig PF18258.1 ORF137185 - 0.0028 17.8 0.1 0.0033 17.6 0.1 1.0 1 0 0 1 1 1 1 Interleukin-4 inducing immunoglobulin-binding domain DUF4010 PF13194.6 ORF13651 - 0.032 13.9 1.9 0.031 14.0 1.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4010) Complex1_LYR PF05347.15 ORF135854 - 0.015 15.3 2.5 0.025 14.6 2.4 1.6 1 1 0 1 1 1 0 Complex 1 protein (LYR family) ETF_QO PF05187.13 ORF135854 - 0.056 13.6 0.1 0.061 13.5 0.1 1.1 1 0 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S USP8_interact PF08941.10 ORF135713 - 0.03 14.1 0.0 0.031 14.1 0.0 1.1 1 0 0 1 1 1 0 USP8 interacting GlcNAc-1_reg PF18440.1 ORF135153 - 0.054 13.7 1.7 0.065 13.5 1.5 1.2 1 1 0 1 1 1 0 Putative GlcNAc-1 phosphotransferase regulatory domain DUF5539 PF17693.1 ORF134514 - 0.0079 15.9 0.3 0.0099 15.6 0.3 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5539) GF_recep_IV PF14843.6 ORF134334 - 0.012 15.5 5.5 0.013 15.3 5.5 1.1 1 0 0 1 1 1 0 Growth factor receptor domain IV APOBEC1 PF18769.1 ORF13402 - 0.026 14.8 0.4 0.03 14.5 0.4 1.3 1 1 0 1 1 1 0 APOBEC1 DUF2661 PF10860.8 ORF133479 - 0.019 15.1 0.8 0.022 14.8 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2661) Stealth_CR3 PF17102.5 ORF132670 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 DUF5450 PF17529.2 ORF131782 - 0.35 11.0 2.1 0.35 11.0 2.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5450) TK PF00265.18 ORF131775 - 0.047 13.6 0.0 0.05 13.5 0.0 1.0 1 0 0 1 1 1 0 Thymidine kinase HI0933_like PF03486.14 ORF131775 - 0.069 11.8 0.1 0.072 11.8 0.1 1.0 1 0 0 1 1 1 0 HI0933-like protein IBV_3B PF03622.13 ORF131710 - 0.0038 17.3 0.1 0.0046 17.1 0.1 1.3 1 1 0 1 1 1 1 IBV 3B protein FeoA PF04023.14 ORF131683 - 3.1e-08 33.7 0.0 3.5e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 FeoA domain HeLo PF14479.6 ORF131556 - 0.032 14.1 0.0 0.042 13.7 0.0 1.1 1 0 0 1 1 1 0 Prion-inhibition and propagation FKS1_dom1 PF14288.6 ORF131284 - 0.023 15.1 1.0 0.025 14.9 1.0 1.1 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 T2SSB PF16537.5 ORF131284 - 0.12 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Type II secretion system protein B SLIDE PF09111.10 ORF131206 - 0.025 14.6 0.1 0.029 14.4 0.1 1.1 1 0 0 1 1 1 0 SLIDE DUF4812 PF16071.5 ORF131177 - 0.18 11.6 0.0 0.24 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4812) ATP-synt_C PF00137.21 ORF131137 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF131137 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 TAXi_N PF14543.6 ORF13096 - 0.54 10.5 9.9 0.56 10.4 9.9 1.0 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal FAM117 PF15388.6 ORF129746 - 0.009 15.5 0.5 0.009 15.5 0.5 1.0 1 0 0 1 1 1 1 Protein Family FAM117 NifU PF01106.17 ORF12966 - 1.9e-26 92.0 0.1 2.2e-26 91.8 0.1 1.0 1 0 0 1 1 1 1 NifU-like domain MCM_OB PF17207.3 ORF127682 - 0.069 13.0 0.2 0.073 12.9 0.2 1.1 1 0 0 1 1 1 0 MCM OB domain CLIP PF12032.8 ORF127532 - 0.014 15.7 0.0 0.015 15.6 0.0 1.2 1 0 0 1 1 1 0 Regulatory CLIP domain of proteinases BMP2K_C PF15282.6 ORF126713 - 0.025 14.5 0.2 0.027 14.4 0.2 1.1 1 0 0 1 1 1 0 BMP-2-inducible protein kinase C-terminus PSII PF00421.19 ORF126527 - 1.1 7.8 4.2 1.2 7.8 4.2 1.0 1 0 0 1 1 1 0 Photosystem II protein TFIIS_C PF01096.18 ORF126270 - 0.086 12.7 3.1 0.45 10.4 0.9 2.5 1 1 1 2 2 2 0 Transcription factor S-II (TFIIS) GP67 PF17634.2 ORF126188 - 0.15 12.5 3.5 0.095 13.1 1.5 1.6 1 1 1 2 2 2 0 Gene product 67 RE_HpaII PF09561.10 ORF126188 - 1.5 8.1 8.4 1.8 7.9 8.4 1.0 1 0 0 1 1 1 0 HpaII restriction endonuclease YpjP PF14005.6 ORF126188 - 5.7 7.0 7.7 6 6.9 7.7 1.0 1 0 0 1 1 1 0 YpjP-like protein DUF3977 PF13122.6 ORF125960 - 0.016 15.4 0.2 0.021 15.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3977) RRM_DME PF15628.6 ORF125614 - 0.12 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 RRM in Demeter DUF2706 PF10913.8 ORF124937 - 0.05 13.5 0.5 0.16 11.8 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2706) OAR PF03826.17 ORF124937 - 0.92 9.4 6.1 12 5.9 0.4 3.0 2 1 1 3 3 3 0 OAR domain Methyltransf_23 PF13489.6 ORF124862 - 3.8e-06 26.8 0.0 3.9e-06 26.8 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF124862 - 6.1e-06 26.9 0.0 7.2e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF124862 - 0.00038 21.0 0.0 0.00046 20.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF124862 - 0.00083 20.0 0.0 0.001 19.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain DPRP PF04244.13 ORF123089 - 0.0032 17.3 0.2 0.0034 17.3 0.2 1.0 1 0 0 1 1 1 1 Deoxyribodipyrimidine photo-lyase-related protein DUF1067 PF06362.11 ORF123030 - 0.072 13.9 1.5 0.099 13.4 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1067) DnaT PF17948.1 ORF123030 - 0.091 12.5 0.9 0.091 12.5 0.9 1.5 1 1 1 2 2 2 0 DnaT DNA-binding domain Fam20C PF06702.12 ORF122478 - 0.0043 16.9 2.0 0.005 16.7 2.0 1.1 1 0 0 1 1 1 1 Golgi casein kinase, C-terminal, Fam20 Cyclin PF08613.11 ORF122228 - 0.005 17.2 0.2 0.006 17.0 0.2 1.1 1 0 0 1 1 1 1 Cyclin MatE PF01554.18 ORF121560 - 0.047 13.3 0.0 0.051 13.2 0.0 1.1 1 0 0 1 1 1 0 MatE DUF1188 PF06690.11 ORF12137 - 0.086 12.4 0.1 0.095 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) APOC4 PF15119.6 ORF121046 - 0.012 15.9 1.2 0.015 15.5 1.2 1.4 1 1 0 1 1 1 0 Apolipoprotein C4 Bac_globin PF01152.21 ORF120725 - 0.093 12.9 0.6 0.1 12.7 0.6 1.2 1 0 0 1 1 1 0 Bacterial-like globin EGF_3 PF12947.7 ORF119858 - 1.4 9.2 8.4 2.8 8.2 1.6 2.9 3 0 0 3 3 3 0 EGF domain DUF3446 PF11928.8 ORF118251 - 4.6 7.6 12.6 0.7 10.2 8.4 1.7 1 1 1 2 2 2 0 Early growth response N-terminal domain DUF4083 PF13314.6 ORF117634 - 0.48 10.4 8.6 0.88 9.6 8.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) DUF2207 PF09972.9 ORF117634 - 4.6 5.9 6.4 4.7 5.8 6.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1199 PF06712.11 ORF11752 - 0.17 11.9 2.7 0.31 11.1 2.5 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1199) Pap_E4 PF02711.14 ORF11752 - 0.29 12.1 1.7 0.33 12.0 1.7 1.1 1 0 0 1 1 1 0 E4 protein RDV-p3 PF09231.10 ORF117284 - 0.011 13.5 0.2 0.012 13.4 0.2 1.0 1 0 0 1 1 1 0 Rice dwarf virus p3 Cmc1 PF08583.10 ORF117280 - 0.026 14.6 0.7 0.049 13.7 0.7 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like DUF4515 PF14988.6 ORF116999 - 0.018 14.9 8.1 0.019 14.8 8.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4515) Tropomyosin_1 PF12718.7 ORF116999 - 0.019 15.1 2.5 0.019 15.1 2.5 1.7 1 1 1 2 2 2 0 Tropomyosin like Med21 PF11221.8 ORF116999 - 0.023 15.0 1.7 0.026 14.8 1.7 1.1 1 0 0 1 1 1 0 Subunit 21 of Mediator complex Mago_nashi PF02792.14 ORF116999 - 0.13 12.4 3.4 0.16 12.1 3.4 1.1 1 0 0 1 1 1 0 Mago nashi protein DUF641 PF04859.12 ORF116999 - 0.19 12.1 4.7 0.4 11.0 4.7 1.5 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) MORN PF02493.20 ORF115419 - 4.1e-15 54.7 20.5 9.2e-07 28.4 0.6 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF115419 - 0.095 12.4 3.3 6.9 6.4 0.0 2.8 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain DUF3048_C PF17479.2 ORF115419 - 0.38 11.2 5.9 0.29 11.5 1.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks361.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks361.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks361.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks361.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Birna_VP3 PF01767.16 ORF114799 - 0.016 15.4 2.3 0.016 15.4 2.3 1.0 1 0 0 1 1 1 0 Birnavirus VP3 protein Mpp10 PF04006.12 ORF114799 - 0.63 8.4 6.7 0.58 8.5 6.7 1.0 1 0 0 1 1 1 0 Mpp10 protein Lir1 PF07207.11 ORF114462 - 0.091 13.0 0.0 0.12 12.6 0.0 1.3 1 1 0 1 1 1 0 Light regulated protein Lir1 GPHR_N PF12537.8 ORF114058 - 0.023 14.8 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 The Golgi pH Regulator (GPHR) Family N-terminal DUF3447 PF11929.8 ORF114026 - 0.012 15.6 0.1 0.017 15.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3447) DUF3847 PF12958.7 ORF113833 - 0.14 12.3 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3847) CytoC_RC PF02276.18 ORF113604 - 0.057 12.8 0.0 0.058 12.8 0.0 1.0 1 0 0 1 1 1 0 Photosynthetic reaction centre cytochrome C subunit HTH_Tnp_Mu_2 PF09039.11 ORF113604 - 0.12 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Mu DNA binding, I gamma subdomain GST_C PF00043.25 ORF113592 - 1.5e-06 28.3 0.1 3.3e-06 27.2 0.0 1.5 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF113592 - 6.9e-05 23.0 0.0 9.4e-05 22.5 0.0 1.3 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Phage_XkdX PF09693.10 ORF113592 - 0.0061 16.6 0.0 0.016 15.2 0.0 1.6 1 0 0 1 1 1 1 Phage uncharacterised protein (Phage_XkdX) Phage_rep_org_N PF09681.10 ORF113592 - 0.022 14.7 0.7 0.025 14.5 0.7 1.2 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) CCT PF06203.14 ORF113555 - 6.7e-05 22.9 12.4 9.8e-05 22.3 12.4 1.3 1 0 0 1 1 1 1 CCT motif DUF4603 PF15376.6 ORF113555 - 0.49 7.7 3.6 0.51 7.7 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) Antimicrobial14 PF08109.11 ORF113473 - 0.17 12.0 0.1 0.39 10.8 0.0 1.7 2 0 0 2 2 2 0 Lactocin 705 family preSET_CXC PF18264.1 ORF11303 - 0.091 13.2 1.8 0.2 12.2 1.8 1.5 1 0 0 1 1 1 0 CXC domain DUF1067 PF06362.11 ORF112428 - 0.072 13.9 1.5 0.099 13.4 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1067) DnaT PF17948.1 ORF112428 - 0.091 12.5 0.9 0.091 12.5 0.9 1.5 1 1 1 2 2 2 0 DnaT DNA-binding domain PC4 PF02229.16 ORF112383 - 4.5e-20 71.0 0.2 5.5e-20 70.7 0.2 1.1 1 0 0 1 1 1 1 Transcriptional Coactivator p15 (PC4) MinE PF03776.14 ORF11235 - 0.0099 15.9 3.4 0.38 10.8 0.6 2.1 1 1 1 2 2 2 2 Septum formation topological specificity factor MinE zf-TFIIIC PF12660.7 ORF112082 - 0.11 12.5 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex DND1_DSRM PF14709.7 ORF112080 - 0.13 12.6 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 double strand RNA binding domain from DEAD END PROTEIN 1 Arv1 PF04161.13 ORF112049 - 0.22 11.7 7.0 0.21 11.7 7.0 1.0 1 0 0 1 1 1 0 Arv1-like family MCM_OB PF17207.3 ORF111016 - 0.069 13.0 0.2 0.073 12.9 0.2 1.1 1 0 0 1 1 1 0 MCM OB domain Paired_CXXCH_1 PF09699.10 ORF110637 - 0.0069 16.1 3.3 0.06 13.1 3.3 2.1 1 1 0 1 1 1 1 Doubled CXXCH motif (Paired_CXXCH_1) Fer4_2 PF12797.7 ORF110637 - 0.02 15.0 0.7 0.02 15.0 0.7 2.5 1 1 1 2 2 2 0 4Fe-4S binding domain zinc-ribbons_6 PF07191.12 ORF110637 - 0.12 12.4 6.8 0.18 11.8 6.9 1.5 1 1 0 1 1 1 0 zinc-ribbons zf-A20 PF01754.16 ORF110637 - 0.37 10.8 11.4 0.44 10.5 0.3 3.1 3 0 0 3 3 3 0 A20-like zinc finger Fer4_9 PF13187.6 ORF110637 - 1.2 9.4 8.4 4.2 7.6 7.7 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF110637 - 1.3 10.2 9.6 0.95 10.6 0.7 3.1 3 1 0 3 3 3 0 4Fe-4S binding domain PPI_Ypi1 PF07491.11 ORF110267 - 7.1 6.6 9.7 4.4 7.2 7.5 1.7 1 1 1 2 2 2 0 Protein phosphatase inhibitor ACT_7 PF13840.6 ORF109287 - 0.0039 17.0 0.1 0.0066 16.2 0.1 1.4 1 0 0 1 1 1 1 ACT domain ATP-synt_C PF00137.21 ORF108904 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF108904 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 Chlorophyllase2 PF12740.7 ORF107910 - 0.074 12.0 0.1 0.088 11.7 0.1 1.1 1 0 0 1 1 1 0 Chlorophyllase enzyme Staphostatin_B PF09023.10 ORF107263 - 0.069 13.2 0.2 0.15 12.2 0.1 1.5 1 1 0 1 1 1 0 Staphostatin B ATP-synt_C PF00137.21 ORF107076 - 4.4e-05 23.7 8.5 5.7e-05 23.4 8.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3493 PF11998.8 ORF107076 - 0.027 14.6 0.7 0.036 14.2 0.5 1.4 1 1 0 1 1 1 0 Low psii accumulation1 / Rep27 Ank_5 PF13857.6 ORF106527 - 0.0029 17.9 0.0 0.004 17.4 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF106527 - 0.0093 16.4 0.2 0.028 14.9 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 ORF106527 - 0.071 13.7 0.0 0.13 12.9 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF106527 - 0.077 13.6 0.0 0.088 13.4 0.0 1.2 1 1 0 1 1 1 0 Ankyrin repeats (3 copies) C1_2 PF03107.16 ORF106405 - 0.026 14.8 7.3 0.026 14.8 7.3 2.1 1 1 1 2 2 2 0 C1 domain Zn_Tnp_IS91 PF14319.6 ORF106405 - 0.11 12.6 0.5 0.11 12.6 0.5 2.0 1 1 1 2 2 2 0 Transposase zinc-binding domain zf-HIT PF04438.16 ORF106405 - 2.1 8.3 11.0 0.55 10.2 6.2 2.3 2 1 0 2 2 2 0 HIT zinc finger Zn-ribbon_8 PF09723.10 ORF106405 - 2.2 8.4 8.7 1.4 9.1 0.5 2.4 2 1 0 2 2 2 0 Zinc ribbon domain Peptidase_C54 PF03416.19 ORF10617 - 4.7e-09 36.1 0.1 5.3e-09 35.9 0.1 1.1 1 0 0 1 1 1 1 Peptidase family C54 VGCC_alpha2 PF08473.11 ORF106074 - 0.039 12.7 0.1 0.043 12.6 0.1 1.0 1 0 0 1 1 1 0 Neuronal voltage-dependent calcium channel alpha 2acd SNAPc19 PF15497.6 ORF105797 - 0.019 15.4 4.8 0.024 15.1 4.8 1.1 1 0 0 1 1 1 0 snRNA-activating protein complex subunit 19, SNAPc subunit 19 Enolase_C PF00113.22 ORF105706 - 8.6e-36 123.7 0.4 9.3e-36 123.6 0.4 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain DUF868 PF05910.12 ORF105540 - 0.037 13.6 0.0 0.043 13.5 0.0 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF868) Ribosomal_L18_c PF14204.6 ORF105540 - 0.063 14.2 0.2 0.071 14.0 0.2 1.2 1 1 0 1 1 1 0 Ribosomal L18 C-terminal region EspG PF06872.11 ORF104992 - 0.14 10.7 0.2 0.14 10.7 0.2 1.0 1 0 0 1 1 1 0 EspG protein PDH PF02153.17 ORF104894 - 0.14 11.2 1.3 0.42 9.6 0.1 1.9 1 1 1 2 2 2 0 Prephenate dehydrogenase Rapsyn_N PF10579.9 ORF10477 - 0.14 12.3 0.2 9.6 6.4 0.0 2.1 2 0 0 2 2 2 0 Rapsyn N-terminal myristoylation and linker region CHORD PF04968.12 ORF104768 - 1.3e-25 89.9 7.7 1.4e-25 89.7 7.7 1.0 1 0 0 1 1 1 1 CHORD zf_CopZ PF18423.1 ORF104768 - 0.02 14.9 0.8 0.039 13.9 0.8 1.6 1 0 0 1 1 1 0 Zinc binding domain PT-TG PF14449.6 ORF104389 - 0.068 13.1 0.2 0.11 12.4 0.2 1.3 1 0 0 1 1 1 0 Pre-toxin TG NinE PF05322.11 ORF104192 - 8.4e-05 22.4 0.4 0.00011 22.0 0.4 1.1 1 0 0 1 1 1 1 NINE Protein Cloacin_immun PF03513.14 ORF104192 - 0.14 12.5 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Cloacin immunity protein DUF3913 PF13052.6 ORF10380 - 0.015 15.6 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3913) DUF2706 PF10913.8 ORF103623 - 0.05 13.5 0.5 0.16 11.8 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2706) OAR PF03826.17 ORF103623 - 0.92 9.4 6.1 12 5.9 0.4 3.0 2 1 1 3 3 3 0 OAR domain Prominin PF05478.11 ORF10228 - 4.4 5.1 5.1 4.3 5.2 5.1 1.1 1 0 0 1 1 1 0 Prominin EPF PF17181.4 ORF102069 - 0.12 12.4 10.1 0.16 11.9 9.6 1.6 1 1 0 1 1 1 0 Epidermal patterning factor proteins DEC-1_N PF04625.13 ORF101954 - 2.2 7.2 7.4 2.2 7.2 7.4 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region TMEM154 PF15102.6 NODE_71842_length_220_cov_0.848649_g63901_i0reverse_frame_1 - 9.2 6.2 7.7 10 6.1 7.7 1.1 1 0 0 1 1 1 0 TMEM154 protein family Dicty_REP PF05086.12 NODE_71842_length_220_cov_0.848649_g63901_i0reverse_frame_1 - 9.9 4.0 9.8 9.1 4.1 9.8 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein CSG2 PF16965.5 NODE_71840_length_220_cov_0.859459_g63899_i0reverse_frame_1 - 0.15 11.0 0.0 0.18 10.7 0.0 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator Integrase_1 PF12835.7 NODE_71837_length_220_cov_0.864865_g63896_i0forward_frame_1 - 0.03 14.4 0.3 0.032 14.3 0.3 1.2 1 0 0 1 1 1 0 Integrase ICL PF00463.21 NODE_71833_length_220_cov_0.864865_g63892_i0forward_frame_1 - 0.00025 19.7 0.0 0.00026 19.6 0.0 1.0 1 0 0 1 1 1 1 Isocitrate lyase family Antimicrobial25 PF16839.5 NODE_71823_length_220_cov_0.945946_g63882_i0forward_frame_1 - 0.0043 17.1 0.3 0.0063 16.6 0.3 1.3 1 0 0 1 1 1 1 Nematode antimicrobial peptide Cys_rich_VLP PF14194.6 NODE_71810_length_220_cov_1.059459_g63869_i0forward_frame_1 - 0.2 11.8 4.4 0.32 11.2 4.4 1.3 1 0 0 1 1 1 0 Cysteine-rich VLP TRM13 PF05206.14 NODE_71803_length_220_cov_1.118919_g63862_i0reverse_frame_1 - 0.16 11.4 3.8 0.17 11.4 3.8 1.0 1 0 0 1 1 1 0 Methyltransferase TRM13 DUF723 PF05265.13 NODE_71802_length_220_cov_1.151351_g63861_i0reverse_frame_1 - 0.23 11.4 0.2 0.23 11.4 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF723) BRCT_2 PF16589.5 NODE_71802_length_220_cov_1.151351_g63861_i0forward_frame_1 - 0.027 14.9 0.4 1.5 9.3 0.1 2.1 1 1 1 2 2 2 0 BRCT domain, a BRCA1 C-terminus domain ApbA PF02558.16 NODE_71791_length_220_cov_1.237838_g63850_i0reverse_frame_1 - 0.047 13.3 0.0 0.062 12.9 0.0 1.2 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pro_3_hydrox_C PF05373.11 NODE_71785_length_220_cov_1.275676_g63844_i0reverse_frame_1 - 0.031 14.4 0.0 0.035 14.2 0.0 1.1 1 0 0 1 1 1 0 L-proline 3-hydroxylase, C-terminal PSII PF00421.19 NODE_71783_length_220_cov_1.286486_g63842_i0forward_frame_1 - 0.0031 16.3 0.0 0.0032 16.2 0.0 1.0 1 0 0 1 1 1 1 Photosystem II protein cNMP_binding PF00027.29 NODE_71782_length_220_cov_1.286486_g63841_i0forward_frame_1 - 0.016 15.3 0.0 0.016 15.2 0.0 1.1 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain TerY_C PF15616.6 NODE_71781_length_220_cov_1.291892_g63840_i0forward_frame_1 - 0.096 12.8 1.6 0.1 12.7 1.6 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain Glu_cys_ligase PF04262.14 NODE_71775_length_220_cov_1.297297_g63834_i0reverse_frame_1 - 0.0028 16.3 0.2 0.0033 16.1 0.2 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase DUF3993 PF13158.6 NODE_71747_length_220_cov_1.410811_g63806_i0forward_frame_1 - 0.14 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3993) Sec15 PF04091.12 NODE_71744_length_220_cov_1.421622_g63803_i0forward_frame_1 - 0.0062 16.0 0.1 0.0071 15.8 0.1 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DUF3309 PF11752.8 NODE_71742_length_220_cov_1.432432_g63801_i0forward_frame_1 - 0.14 12.2 0.1 0.25 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3309) FA_synthesis PF02504.15 NODE_71740_length_220_cov_1.443243_g63799_i0reverse_frame_1 - 3.5e-18 65.7 0.0 3.8e-18 65.6 0.0 1.0 1 0 0 1 1 1 1 Fatty acid synthesis protein CaATP_NAI PF12515.8 NODE_71736_length_220_cov_1.486486_g63795_i0reverse_frame_1 - 0.1 12.2 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Ca2+-ATPase N terminal autoinhibitory domain RL10P_insert PF17777.1 NODE_71731_length_220_cov_1.513514_g63790_i0reverse_frame_1 - 0.11 12.5 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Insertion domain in 60S ribosomal protein L10P Urotensin_II PF02083.15 NODE_71728_length_220_cov_1.518919_g63787_i0reverse_frame_1 - 0.031 14.0 3.9 0.074 12.8 3.9 1.7 1 0 0 1 1 1 0 Urotensin II zf-CXXC PF02008.20 NODE_71728_length_220_cov_1.518919_g63787_i0reverse_frame_1 - 0.097 12.7 2.0 0.097 12.7 2.0 2.4 3 0 0 3 3 3 0 CXXC zinc finger domain Fer4_2 PF12797.7 NODE_71728_length_220_cov_1.518919_g63787_i0reverse_frame_1 - 0.3 11.3 5.9 0.39 10.9 0.8 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain EF1G PF00647.19 NODE_71726_length_220_cov_1.529730_g63785_i0reverse_frame_1 - 0.05 13.7 1.5 0.059 13.4 1.5 1.0 1 0 0 1 1 1 0 Elongation factor 1 gamma, conserved domain DUF3561 PF12084.8 NODE_71711_length_220_cov_1.675676_g63770_i0reverse_frame_1 - 0.031 14.3 0.0 0.035 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3561) U3snoRNP10 PF12397.8 NODE_71711_length_220_cov_1.675676_g63770_i0reverse_frame_1 - 0.08 13.3 0.0 0.08 13.3 0.0 1.2 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 10 Jagunal PF07086.12 NODE_71699_length_220_cov_1.724324_g63758_i0forward_frame_1 - 0.23 11.5 4.5 0.23 11.5 4.5 1.0 1 0 0 1 1 1 0 Jagunal, ER re-organisation during oogenesis Pkinase PF00069.25 NODE_71691_length_220_cov_1.762162_g63750_i0forward_frame_1 - 1.3e-07 31.3 0.0 1.3e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Glyoxalase PF00903.25 NODE_71691_length_220_cov_1.762162_g63750_i0forward_frame_1 - 0.077 13.2 0.0 0.089 13.0 0.0 1.1 1 0 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Pkinase_Tyr PF07714.17 NODE_71691_length_220_cov_1.762162_g63750_i0forward_frame_1 - 0.13 11.5 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase RecU PF03838.14 NODE_71686_length_220_cov_1.810811_g63745_i0reverse_frame_1 - 0.055 13.5 1.4 0.065 13.2 1.4 1.1 1 0 0 1 1 1 0 Recombination protein U CNOT1_TTP_bind PF16417.5 NODE_71686_length_220_cov_1.810811_g63745_i0reverse_frame_1 - 0.068 12.3 2.3 0.073 12.3 2.3 1.0 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Astro_capsid_p PF12226.8 NODE_71684_length_220_cov_1.837838_g63743_i0forward_frame_1 - 0.27 10.4 0.8 0.3 10.2 0.8 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF2721 PF11026.8 NODE_71682_length_220_cov_1.848649_g63741_i0forward_frame_1 - 0.011 15.6 0.3 0.014 15.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Baculo_11_kDa PF06143.11 NODE_71682_length_220_cov_1.848649_g63741_i0forward_frame_1 - 0.35 10.5 3.7 0.5 10.0 3.7 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family KASH PF10541.9 NODE_71679_length_220_cov_1.908108_g63738_i0reverse_frame_1 - 0.046 14.0 4.3 0.063 13.6 4.3 1.2 1 0 0 1 1 1 0 Nuclear envelope localisation domain Ly49 PF08391.10 NODE_71679_length_220_cov_1.908108_g63738_i0reverse_frame_1 - 0.094 13.1 0.6 0.1 12.9 0.6 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region RVT_1 PF00078.27 NODE_71676_length_220_cov_1.940541_g63735_i0reverse_frame_1 - 0.0004 20.0 0.1 0.00041 19.9 0.1 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) ErmC PF06308.11 NODE_71671_length_220_cov_2.016216_g63730_i0forward_frame_1 - 0.095 13.1 1.1 0.16 12.3 1.1 1.3 1 0 0 1 1 1 0 23S rRNA methylastransferase leader peptide (ErmCL) Tox-REase-2 PF15646.6 NODE_71665_length_220_cov_2.048649_g63724_i0reverse_frame_1 - 0.037 14.2 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 Multi_Drug_Res PF00893.19 NODE_71663_length_220_cov_2.064865_g63722_i0forward_frame_1 - 1.7e-24 86.3 1.9 1.8e-24 86.2 1.9 1.0 1 0 0 1 1 1 1 Small Multidrug Resistance protein Flg_bb_rod PF00460.20 NODE_71660_length_220_cov_2.086486_g63719_i0forward_frame_1 - 0.053 13.5 0.6 1.2 9.1 0.2 2.1 2 0 0 2 2 2 0 Flagella basal body rod protein zf_PR_Knuckle PF18445.1 NODE_71649_length_220_cov_2.205405_g63708_i0forward_frame_1 - 0.036 13.9 0.9 0.057 13.2 0.3 1.6 2 0 0 2 2 2 0 PR zinc knuckle motif NR_Repeat PF14046.6 NODE_71648_length_220_cov_2.232432_g63707_i0reverse_frame_1 - 0.9 9.7 6.0 6.5 7.0 1.1 2.3 2 0 0 2 2 2 0 Nuclear receptor repeat CFC PF09443.10 NODE_71640_length_220_cov_2.329730_g63699_i0forward_frame_1 - 0.072 13.0 2.1 0.25 11.2 0.5 2.1 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) Gly_transf_sug PF04488.15 NODE_71637_length_220_cov_2.378378_g63696_i0reverse_frame_1 - 2e-05 25.2 0.0 2.3e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase sugar-binding region containing DXD motif LRR_5 PF13306.6 NODE_71626_length_220_cov_2.545946_g63685_i0forward_frame_1 - 0.024 14.6 3.2 0.025 14.5 3.2 1.0 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) Transformer PF06495.11 NODE_71615_length_220_cov_2.810811_g63674_i0forward_frame_1 - 0.0011 19.1 0.5 0.0011 19.1 0.5 1.0 1 0 0 1 1 1 1 Fruit fly transformer protein DUF3677 PF12432.8 NODE_71611_length_220_cov_2.983784_g63670_i0reverse_frame_1 - 0.0021 18.3 0.6 0.0027 18.0 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3677) Importin_rep_4 PF18808.1 NODE_71607_length_220_cov_3.167568_g63666_i0forward_frame_1 - 5.8e-08 32.9 0.3 5.9e-08 32.9 0.3 1.1 1 0 0 1 1 1 1 Importin repeat DUF807 PF05660.11 NODE_71585_length_220_cov_14.837838_g63644_i0reverse_frame_1 - 0.025 14.6 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 Coxiella burnetii protein of unknown function (DUF807) Ribosomal_S11 PF00411.19 NODE_71577_length_220_cov_24.659459_g63636_i0forward_frame_1 - 0.00095 19.5 0.1 0.0015 18.9 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S11 AAA_lid_4 PF17864.1 NODE_71574_length_220_cov_30.086486_g63633_i0forward_frame_1 - 0.3 10.9 5.2 6.1 6.7 1.5 2.1 1 1 1 2 2 2 0 RuvB AAA lid domain DUF410 PF04190.13 NODE_71569_length_220_cov_36.924324_g63628_i0reverse_frame_1 - 5.8e-05 23.0 0.3 7.1e-05 22.7 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF410) EFG_IV PF03764.18 NODE_71566_length_220_cov_41.313514_g63625_i0reverse_frame_1 - 0.13 12.0 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Elongation factor G, domain IV DUF2838 PF10998.8 NODE_71565_length_220_cov_41.686486_g63624_i0forward_frame_1 - 0.13 12.5 6.8 0.19 12.0 6.8 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2838) PL48 PF15903.5 NODE_71563_length_220_cov_42.464865_g63622_i0forward_frame_1 - 0.19 10.6 0.0 0.22 10.4 0.0 1.1 1 0 0 1 1 1 0 Filopodia upregulated, FAM65 FXR_C1 PF16096.5 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 0.09 13.0 5.1 0.12 12.6 5.0 1.4 1 1 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 DTHCT PF08070.11 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 0.13 13.1 17.8 0.17 12.7 17.8 1.2 1 0 0 1 1 1 0 DTHCT (NUC029) region RNA_polI_A34 PF08208.11 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 0.91 9.6 18.1 1.1 9.3 18.1 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 YqfQ PF14181.6 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 5.8 7.1 10.0 6.7 6.9 10.0 1.2 1 0 0 1 1 1 0 YqfQ-like protein CDC45 PF02724.14 NODE_71562_length_220_cov_42.529730_g63621_i0forward_frame_1 - 6.1 5.0 14.8 6.8 4.8 14.8 1.0 1 0 0 1 1 1 0 CDC45-like protein ThiF PF00899.21 NODE_71555_length_220_cov_48.227027_g63614_i0forward_frame_1 - 0.028 13.8 0.4 0.033 13.5 0.4 1.1 1 0 0 1 1 1 0 ThiF family Gemin7 PF11095.8 NODE_71547_length_220_cov_56.972973_g63606_i0reverse_frame_1 - 0.12 12.3 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Gem-associated protein 7 (Gemin7) HCV_NS5a_1a PF08300.13 NODE_71546_length_220_cov_57.124324_g63605_i0forward_frame_1 - 0.038 14.1 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a zinc finger domain zinc_ribbon_12 PF11331.8 NODE_71546_length_220_cov_57.124324_g63605_i0forward_frame_1 - 0.046 13.5 0.1 0.072 12.9 0.1 1.3 1 0 0 1 1 1 0 Probable zinc-ribbon domain DUF485 PF04341.12 NODE_71539_length_220_cov_65.081081_g63598_i0reverse_frame_1 - 0.063 13.2 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 YajC PF02699.15 NODE_71539_length_220_cov_65.081081_g63598_i0reverse_frame_1 - 0.07 13.0 1.3 0.091 12.7 1.3 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit LacY_symp PF01306.19 NODE_71528_length_220_cov_82.502703_g63587_i0reverse_frame_1 - 0.089 11.6 0.8 0.1 11.4 0.8 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter Ribosomal_S27e PF01667.17 NODE_71523_length_220_cov_104.945946_g63582_i0forward_frame_1 - 0.0064 16.2 0.4 0.0064 16.2 0.4 1.6 2 0 0 2 2 2 1 Ribosomal protein S27 Dicty_spore_N PF04562.12 NODE_71516_length_220_cov_223.329730_g63575_i0forward_frame_1 - 0.0061 17.2 3.7 0.0063 17.2 3.7 1.1 1 0 0 1 1 1 1 Dictyostelium spore coat protein, N terminus NECFESHC PF16621.5 NODE_71501_length_221_cov_0.860215_g63560_i0forward_frame_1 - 3.4 7.7 6.9 2.9 7.9 0.6 2.2 2 0 0 2 2 2 0 SH3 terminal domain of 2nd SH3 on Neutrophil cytosol factor 1 DUF1450 PF07293.11 NODE_71495_length_221_cov_0.962366_g63554_i0reverse_frame_1 - 0.23 11.3 4.7 0.33 10.8 4.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) DUF910 PF06014.11 NODE_71487_length_221_cov_1.064516_g63546_i0forward_frame_1 - 0.024 14.6 1.7 1.4 9.0 0.2 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF910) Ion_trans PF00520.31 NODE_71481_length_221_cov_1.080645_g63540_i0reverse_frame_1 - 4.4e-10 39.2 0.8 4.6e-10 39.1 0.8 1.0 1 0 0 1 1 1 1 Ion transport protein Nodulin_late PF07127.11 NODE_71480_length_221_cov_1.086022_g63539_i0forward_frame_1 - 0.012 15.9 5.2 0.99 9.8 0.3 2.1 1 1 1 2 2 2 0 Late nodulin protein FBA_2 PF07735.17 NODE_71470_length_221_cov_1.236559_g63529_i0reverse_frame_1 - 0.24 11.5 0.8 0.53 10.4 0.8 1.8 1 1 0 1 1 1 0 F-box associated LptF_LptG PF03739.14 NODE_71467_length_221_cov_1.252688_g63526_i0forward_frame_1 - 1.2e-12 47.4 1.2 1.3e-12 47.2 1.2 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG PTS_EIIC_2 PF13303.6 NODE_71467_length_221_cov_1.252688_g63526_i0forward_frame_1 - 0.00023 20.3 1.3 0.00025 20.2 1.3 1.0 1 0 0 1 1 1 1 Phosphotransferase system, EIIC EMP70 PF02990.16 NODE_71467_length_221_cov_1.252688_g63526_i0forward_frame_1 - 0.11 11.1 1.4 0.12 11.0 1.4 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 ketoacyl-synt PF00109.26 NODE_71458_length_221_cov_1.284946_g63517_i0reverse_frame_1 - 0.0077 15.8 0.0 0.0084 15.7 0.0 1.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain MetRS-N PF09635.10 NODE_71453_length_221_cov_1.290323_g63512_i0reverse_frame_1 - 0.086 13.4 0.1 0.09 13.3 0.1 1.1 1 0 0 1 1 1 0 MetRS-N binding domain DUF3464 PF11947.8 NODE_71453_length_221_cov_1.290323_g63512_i0forward_frame_1 - 0.039 13.7 0.5 0.05 13.3 0.5 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 PsbL PF02419.17 NODE_71453_length_221_cov_1.290323_g63512_i0forward_frame_1 - 0.37 10.8 3.5 0.67 10.0 3.5 1.4 1 0 0 1 1 1 0 PsbL protein Omega-toxin PF06357.11 NODE_71451_length_221_cov_1.290323_g63510_i0forward_frame_1 - 0.0032 17.2 5.7 0.0053 16.5 5.7 1.4 1 0 0 1 1 1 1 Omega-atracotoxin Toxin_21 PF08091.11 NODE_71451_length_221_cov_1.290323_g63510_i0forward_frame_1 - 0.0092 15.9 7.3 0.015 15.2 7.3 1.4 1 0 0 1 1 1 1 Spider insecticidal peptide UPF0506 PF11703.8 NODE_71451_length_221_cov_1.290323_g63510_i0forward_frame_1 - 0.19 12.2 9.1 0.35 11.3 9.1 1.5 1 1 0 1 1 1 0 UPF0506 Conotoxin_I2 PF17557.2 NODE_71451_length_221_cov_1.290323_g63510_i0forward_frame_1 - 0.58 10.3 10.2 0.18 12.0 7.7 1.5 2 0 0 2 2 2 0 I2-superfamily conotoxins IMUP PF15761.5 NODE_71449_length_221_cov_1.290323_g63508_i0reverse_frame_1 - 0.74 10.5 12.5 0.82 10.4 12.5 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_71449_length_221_cov_1.290323_g63508_i0reverse_frame_1 - 2.1 7.9 15.3 2.1 7.9 15.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Cytochrom_C1 PF02167.15 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_1 - 0.00075 19.3 0.1 0.00081 19.2 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C1 family GCV_H PF01597.19 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_1 - 0.02 14.8 0.2 0.027 14.4 0.2 1.2 1 0 0 1 1 1 0 Glycine cleavage H-protein DUF1514 PF07438.11 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_1 - 0.073 13.0 0.3 8.9 6.3 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1514) Peptidase_S49 PF01343.18 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_1 - 0.1 12.6 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Peptidase family S49 TFB6 PF17110.5 NODE_71435_length_221_cov_1.338710_g63494_i0reverse_frame_1 - 0.04 13.7 0.9 0.05 13.3 0.9 1.1 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF2544 PF11245.8 NODE_71431_length_221_cov_1.370968_g63490_i0forward_frame_1 - 0.089 12.2 0.0 0.093 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2544) TMPIT PF07851.13 NODE_71424_length_221_cov_1.408602_g63483_i0reverse_frame_1 - 0.038 13.2 0.0 0.041 13.1 0.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein Cytochrom_CIII PF02085.16 NODE_71416_length_221_cov_1.467742_g63475_i0forward_frame_1 - 0.037 14.4 0.0 0.038 14.3 0.0 1.1 1 0 0 1 1 1 0 Class III cytochrome C family Baculo_LEF-2 PF03041.14 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_1 - 0.041 13.5 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 lef-2 DUF2034 PF10356.9 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_1 - 0.049 13.1 3.2 0.053 13.0 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2034) Vps39_2 PF10367.9 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_1 - 0.06 13.8 2.0 0.068 13.6 2.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 Eapp_C PF10238.9 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_1 - 0.23 11.5 4.0 0.26 11.4 4.0 1.0 1 0 0 1 1 1 0 E2F-associated phosphoprotein Ost4 PF10215.9 NODE_71415_length_221_cov_1.467742_g63474_i0forward_frame_1 - 0.061 13.2 0.4 0.13 12.1 0.4 1.6 1 0 0 1 1 1 0 Oligosaccaryltransferase DUF4661 PF15576.6 NODE_71413_length_221_cov_1.500000_g63472_i0reverse_frame_1 - 0.014 15.4 1.5 0.017 15.0 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) GMC_oxred_N PF00732.19 NODE_71411_length_221_cov_1.516129_g63470_i0reverse_frame_1 - 9e-11 41.7 0.0 9.6e-11 41.6 0.0 1.0 1 0 0 1 1 1 1 GMC oxidoreductase MSP1_C PF07462.11 NODE_71408_length_221_cov_1.548387_g63467_i0reverse_frame_1 - 0.81 8.3 1.9 0.88 8.2 1.9 1.0 1 0 0 1 1 1 0 Merozoite surface protein 1 (MSP1) C-terminus DUF192 PF02643.15 NODE_71405_length_221_cov_1.559140_g63464_i0reverse_frame_1 - 0.0069 16.5 0.1 0.007 16.5 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized ACR, COG1430 DUF4118 PF13493.6 NODE_71403_length_221_cov_1.580645_g63462_i0forward_frame_1 - 0.061 13.1 0.1 0.08 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) DUF3331 PF11811.8 NODE_71400_length_221_cov_1.602151_g63459_i0forward_frame_1 - 0.033 14.0 1.9 0.039 13.8 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) MCU PF04678.13 NODE_71399_length_221_cov_1.618280_g63458_i0reverse_frame_1 - 0.0064 16.6 0.6 0.0078 16.3 0.6 1.1 1 0 0 1 1 1 1 Mitochondrial calcium uniporter DUF2487 PF10673.9 NODE_71399_length_221_cov_1.618280_g63458_i0reverse_frame_1 - 0.05 13.6 0.2 0.056 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2487) LpxC PF03331.13 NODE_71396_length_221_cov_1.655914_g63455_i0forward_frame_1 - 0.087 12.3 0.1 0.095 12.2 0.1 1.0 1 0 0 1 1 1 0 UDP-3-O-acyl N-acetylglycosamine deacetylase CobW_C PF07683.14 NODE_71389_length_221_cov_1.715054_g63448_i0forward_frame_1 - 4.5e-08 32.9 0.0 1.7e-07 31.1 0.0 1.7 2 0 0 2 2 2 1 Cobalamin synthesis protein cobW C-terminal domain RRM_DME PF15628.6 NODE_71388_length_221_cov_1.715054_g63447_i0forward_frame_1 - 0.073 13.2 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 RRM in Demeter DUF627 PF04781.12 NODE_71383_length_221_cov_1.720430_g63442_i0forward_frame_1 - 0.15 12.1 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF627) Lamprin PF06403.11 NODE_71381_length_221_cov_1.720430_g63440_i0forward_frame_1 - 0.21 11.5 1.8 0.24 11.3 1.8 1.1 1 0 0 1 1 1 0 Lamprin TCL1_MTCP1 PF01840.17 NODE_71371_length_221_cov_1.827957_g63430_i0reverse_frame_1 - 0.18 11.4 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 TCL1/MTCP1 family LtuA PF17446.2 NODE_71366_length_221_cov_1.860215_g63425_i0forward_frame_1 - 1.5 9.3 4.6 8.6 6.9 0.4 2.2 2 0 0 2 2 2 0 Late transcription unit A p47_phox_C PF08944.11 NODE_71357_length_221_cov_1.946237_g63416_i0reverse_frame_1 - 0.042 13.3 0.1 0.065 12.7 0.1 1.3 1 0 0 1 1 1 0 NADPH oxidase subunit p47Phox, C terminal domain DUF919 PF06034.11 NODE_71357_length_221_cov_1.946237_g63416_i0forward_frame_1 - 0.081 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF919) MbtH PF03621.13 NODE_71349_length_221_cov_2.112903_g63408_i0forward_frame_1 - 0.065 12.7 1.3 0.81 9.2 0.0 2.2 2 0 0 2 2 2 0 MbtH-like protein Toxin_14 PF07829.11 NODE_71349_length_221_cov_2.112903_g63408_i0forward_frame_1 - 0.23 11.4 4.6 3.1 7.8 0.7 2.5 2 0 0 2 2 2 0 Alpha-A conotoxin PIVA-like protein VWA_N PF08399.11 NODE_71347_length_221_cov_2.123656_g63406_i0forward_frame_1 - 0.05 14.1 0.0 0.063 13.8 0.0 1.2 1 0 0 1 1 1 0 VWA N-terminal SPT16 PF08644.11 NODE_71342_length_221_cov_2.145161_g63401_i0forward_frame_1 - 0.015 15.4 0.7 0.017 15.3 0.7 1.0 1 0 0 1 1 1 0 FACT complex subunit (SPT16/CDC68) SLATT_5 PF18160.1 NODE_71342_length_221_cov_2.145161_g63401_i0forward_frame_1 - 0.049 13.0 0.8 0.054 12.8 0.8 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Pkinase PF00069.25 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 2e-22 79.9 0.0 2.3e-22 79.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 6.8e-13 48.5 0.0 7.7e-13 48.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 0.0055 15.5 0.0 0.006 15.4 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 0.011 14.7 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 0.025 14.5 0.1 0.032 14.2 0.1 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kinase-like PF14531.6 NODE_71341_length_221_cov_2.150538_g63400_i0reverse_frame_1 - 0.11 11.8 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Kinase-like AAA_30 PF13604.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 2.4e-07 30.7 0.0 2.4e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 6.6e-07 29.8 0.0 6.7e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 1.7e-05 25.2 0.0 1.7e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 7e-05 22.7 0.0 7e-05 22.7 0.0 1.0 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0002 21.3 0.0 0.00023 21.1 0.0 1.2 1 0 0 1 1 1 1 NTPase ATPase_2 PF01637.18 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0016 18.4 0.0 0.0017 18.3 0.0 1.0 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0029 17.9 0.0 0.0029 17.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0031 17.0 0.0 0.0031 17.0 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA PF00004.29 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0037 17.7 0.0 0.0041 17.5 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.0047 17.5 0.0 0.0049 17.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.011 15.0 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MeaB PF03308.16 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.012 14.6 0.0 0.012 14.6 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_33 PF13671.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.012 15.7 0.2 0.019 15.1 0.2 1.4 1 1 0 1 1 1 0 AAA domain AAA_10 PF12846.7 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.014 14.3 0.0 0.015 14.2 0.0 1.0 1 0 0 1 1 1 0 AAA-like domain AAA_29 PF13555.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.02 14.6 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.035 13.7 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.037 13.6 0.0 0.049 13.2 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.046 13.1 0.0 0.046 13.1 0.0 1.1 1 0 0 1 1 1 0 KaiC AAA_17 PF13207.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.057 13.8 0.1 0.082 13.3 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.059 13.4 0.0 0.071 13.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_28 PF13521.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.069 13.4 0.6 0.078 13.2 0.6 1.3 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.075 11.9 0.0 0.078 11.9 0.0 1.0 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_24 PF13479.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.079 12.7 0.0 0.088 12.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.08 13.3 0.0 0.1 13.0 0.0 1.2 1 0 0 1 1 1 0 RNA helicase ResIII PF04851.15 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.086 12.8 0.0 0.087 12.8 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit ATP_bind_1 PF03029.17 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.091 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Viral_helicase1 PF01443.18 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.092 12.5 0.1 0.097 12.4 0.1 1.1 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_14 PF13173.6 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.13 12.3 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.15 11.5 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein Zeta_toxin PF06414.12 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.16 11.2 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin UvrD-helicase PF00580.21 NODE_71340_length_221_cov_2.161290_g63399_i0reverse_frame_1 - 0.22 11.0 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain Humanin PF15040.6 NODE_71339_length_221_cov_2.172043_g63398_i0forward_frame_1 - 0.083 12.4 1.6 0.12 11.9 1.6 1.2 1 0 0 1 1 1 0 Humanin family Corona_S2 PF01601.16 NODE_71328_length_221_cov_2.349462_g63387_i0forward_frame_1 - 0.71 8.3 5.5 0.85 8.0 5.5 1.0 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein Bee_toxin PF17454.2 NODE_71328_length_221_cov_2.349462_g63387_i0forward_frame_1 - 1.2 9.2 9.8 0.2 11.7 4.1 2.1 2 0 0 2 2 2 0 Honey bee toxin DUF5053 PF16476.5 NODE_71325_length_221_cov_2.381720_g63384_i0reverse_frame_1 - 0.0047 16.6 0.1 0.0072 16.0 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5053) ERGIC_N PF13850.6 NODE_71325_length_221_cov_2.381720_g63384_i0reverse_frame_1 - 0.076 13.4 0.1 0.096 13.0 0.1 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) HTH_54 PF18607.1 NODE_71324_length_221_cov_2.397849_g63383_i0reverse_frame_1 - 0.00012 22.0 0.0 0.00015 21.7 0.0 1.1 1 0 0 1 1 1 1 ParA helix turn helix domain DEK_C PF08766.11 NODE_71324_length_221_cov_2.397849_g63383_i0reverse_frame_1 - 0.009 15.9 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 DEK C terminal domain RabGAP-TBC PF00566.18 NODE_71320_length_221_cov_2.451613_g63379_i0forward_frame_1 - 0.0019 17.9 0.1 0.0019 17.9 0.1 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF2046 PF09755.9 NODE_71304_length_221_cov_2.924731_g63363_i0reverse_frame_1 - 0.016 14.4 0.1 0.02 14.2 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) DASH_Spc19 PF08287.11 NODE_71304_length_221_cov_2.924731_g63363_i0reverse_frame_1 - 0.062 13.2 0.0 0.086 12.7 0.0 1.1 1 0 0 1 1 1 0 Spc19 CP12 PF02672.15 NODE_71302_length_221_cov_3.091398_g63361_i0reverse_frame_1 - 0.019 15.7 0.1 0.024 15.4 0.1 1.2 1 1 0 1 1 1 0 CP12 domain Peptidase_M50B PF13398.6 NODE_71302_length_221_cov_3.091398_g63361_i0forward_frame_1 - 1.3 8.6 7.8 1.5 8.4 7.8 1.1 1 0 0 1 1 1 0 Peptidase M50B-like LUD_dom PF02589.15 NODE_71298_length_221_cov_3.247312_g63357_i0forward_frame_1 - 0.032 14.0 0.0 0.049 13.4 0.0 1.3 1 0 0 1 1 1 0 LUD domain rve PF00665.26 NODE_71290_length_221_cov_4.435484_g63349_i0forward_frame_1 - 0.013 15.7 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain GILT PF03227.16 NODE_71272_length_221_cov_31.295699_g63331_i0reverse_frame_1 - 0.12 12.6 8.1 0.26 11.5 8.1 1.5 1 1 0 1 1 1 0 Gamma interferon inducible lysosomal thiol reductase (GILT) DUF809 PF05663.11 NODE_71272_length_221_cov_31.295699_g63331_i0forward_frame_1 - 9.5 6.4 6.9 18 5.5 1.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF809) LMF1 PF06762.14 NODE_71271_length_221_cov_31.634409_g63330_i0forward_frame_1 - 2.7 7.0 9.0 2.8 7.0 9.0 1.1 1 0 0 1 1 1 0 Lipase maturation factor RIC1 PF07064.13 NODE_71267_length_221_cov_33.032258_g63326_i0forward_frame_1 - 0.072 12.5 0.0 0.088 12.2 0.0 1.1 1 0 0 1 1 1 0 RIC1 NKAIN PF05640.14 NODE_71266_length_221_cov_33.806452_g63325_i0reverse_frame_1 - 0.0021 17.4 0.6 0.0021 17.4 0.6 1.2 1 0 0 1 1 1 1 Na,K-Atpase Interacting protein PolC_DP2 PF03833.13 NODE_71264_length_221_cov_36.456989_g63323_i0reverse_frame_1 - 0.19 9.5 3.8 0.16 9.8 3.8 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 AmiS_UreI PF02293.15 NODE_71261_length_221_cov_38.354839_g63320_i0reverse_frame_1 - 0.066 13.2 0.0 0.066 13.2 0.0 1.1 1 0 0 1 1 1 0 AmiS/UreI family transporter LtuA PF17446.2 NODE_71260_length_221_cov_41.107527_g63319_i0reverse_frame_1 - 0.15 12.5 0.3 0.35 11.3 0.3 1.6 1 1 0 1 1 1 0 Late transcription unit A # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks362.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks362.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks362.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks362.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4373 PF14297.6 NODE_71258_length_221_cov_42.198925_g63317_i0reverse_frame_1 - 0.036 14.9 0.0 0.036 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4373) PAP1 PF08601.10 NODE_71258_length_221_cov_42.198925_g63317_i0forward_frame_1 - 0.053 13.2 0.2 0.053 13.2 0.2 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 mit_SMPDase PF14724.6 NODE_71251_length_221_cov_49.360215_g63310_i0forward_frame_1 - 0.22 9.4 0.1 0.22 9.4 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial-associated sphingomyelin phosphodiesterase Ins_beta PF03488.14 NODE_71249_length_221_cov_49.586022_g63308_i0forward_frame_1 - 1.5 8.8 8.4 7.9 6.6 8.4 1.9 1 1 0 1 1 1 0 Nematode insulin-related peptide beta type TIM21 PF08294.11 NODE_71247_length_221_cov_51.344086_g63306_i0forward_frame_1 - 0.13 12.2 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 TIM21 Gliadin PF13016.6 NODE_71243_length_221_cov_55.537634_g63302_i0forward_frame_1 - 0.11 12.9 4.1 0.085 13.3 3.2 1.2 1 1 0 1 1 1 0 Cys-rich Gliadin N-terminal MtaB PF12176.8 NODE_71242_length_221_cov_56.005376_g63301_i0forward_frame_1 - 0.06 12.1 0.0 0.065 12.0 0.0 1.0 1 0 0 1 1 1 0 Methanol-cobalamin methyltransferase B subunit UPF0239 PF06783.11 NODE_71238_length_221_cov_58.731183_g63297_i0reverse_frame_1 - 0.0087 16.2 0.1 0.011 15.9 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0239) DUF1043 PF06295.12 NODE_71238_length_221_cov_58.731183_g63297_i0reverse_frame_1 - 0.01 15.8 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) DUF2953 PF11167.8 NODE_71238_length_221_cov_58.731183_g63297_i0reverse_frame_1 - 0.12 12.4 0.7 0.18 11.9 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2953) DNA_ligase_OB_2 PF14743.6 NODE_71231_length_221_cov_70.376344_g63290_i0reverse_frame_1 - 0.038 14.0 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 DNA ligase OB-like domain TEBP_beta PF07404.11 NODE_71224_length_221_cov_80.037634_g63283_i0forward_frame_1 - 0.39 10.0 2.2 0.39 10.0 2.2 1.1 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) DUF3796 PF12676.7 NODE_71213_length_221_cov_173.827957_g63272_i0forward_frame_1 - 0.69 10.4 7.9 0.77 10.2 7.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) SR-25 PF10500.9 NODE_71211_length_221_cov_246.881720_g63270_i0reverse_frame_1 - 0.049 13.2 11.1 0.052 13.2 11.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein NOB1_Zn_bind PF08772.11 NODE_71211_length_221_cov_246.881720_g63270_i0reverse_frame_1 - 0.22 11.7 7.9 0.26 11.5 7.9 1.1 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like PolC_DP2 PF03833.13 NODE_71211_length_221_cov_246.881720_g63270_i0reverse_frame_1 - 0.23 9.3 5.6 0.24 9.2 5.6 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 FAD_binding_6 PF00970.24 NODE_71205_length_221_cov_1636.913978_g63264_i0forward_frame_1 - 5.9e-19 68.3 0.0 6.5e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain sCache_3_3 PF17202.4 NODE_71205_length_221_cov_1636.913978_g63264_i0forward_frame_1 - 0.085 13.3 0.0 0.085 13.3 0.0 1.1 1 0 0 1 1 1 0 Single cache domain 3 RNase_PH PF01138.21 NODE_71204_length_221_cov_1864.236559_g63263_i0forward_frame_1 - 0.039 14.4 0.2 0.045 14.2 0.2 1.1 1 0 0 1 1 1 0 3' exoribonuclease family, domain 1 Mucin PF01456.17 NODE_71200_length_222_cov_0.855615_g63259_i0reverse_frame_1 - 1 9.3 4.8 1 9.3 4.8 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein PCIF1_WW PF12237.8 NODE_71197_length_222_cov_0.855615_g63256_i0forward_frame_1 - 0.032 13.9 0.2 0.032 13.9 0.2 1.1 1 0 0 1 1 1 0 Phosphorylated CTD interacting factor 1 WW domain Prok-RING_1 PF14446.6 NODE_71192_length_222_cov_0.871658_g63251_i0reverse_frame_1 - 0.12 12.3 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Ovate PF04844.13 NODE_71181_length_222_cov_1.064171_g63240_i0forward_frame_1 - 1 9.4 3.8 1.5 8.8 3.8 1.3 1 0 0 1 1 1 0 Transcriptional repressor, ovate ANAPC8 PF04049.13 NODE_71178_length_222_cov_1.069519_g63237_i0forward_frame_1 - 0.012 15.6 0.2 0.013 15.6 0.2 1.1 1 0 0 1 1 1 0 Anaphase promoting complex subunit 8 / Cdc23 EF-hand_8 PF13833.6 NODE_71175_length_222_cov_1.149733_g63234_i0reverse_frame_1 - 0.15 12.0 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair DNA_pol_B_palm PF14792.6 NODE_71174_length_222_cov_1.155080_g63233_i0reverse_frame_1 - 3.6e-16 59.4 0.1 4e-16 59.2 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase beta palm NTP_transf_2 PF01909.23 NODE_71174_length_222_cov_1.155080_g63233_i0reverse_frame_1 - 0.038 14.3 0.0 0.07 13.4 0.0 1.5 1 1 0 1 1 1 0 Nucleotidyltransferase domain HP0268 PF18618.1 NODE_71174_length_222_cov_1.155080_g63233_i0forward_frame_1 - 0.15 12.5 0.0 0.28 11.6 0.0 1.4 1 1 0 1 1 1 0 HP0268 IMPDH PF00478.25 NODE_71170_length_222_cov_1.176471_g63229_i0reverse_frame_1 - 0.041 12.9 0.1 0.046 12.7 0.1 1.0 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Colicin_K PF17500.2 NODE_71169_length_222_cov_1.187166_g63228_i0forward_frame_1 - 0.0089 16.6 2.6 0.01 16.4 2.6 1.1 1 0 0 1 1 1 1 Colicin-K DDE_3 PF13358.6 NODE_71167_length_222_cov_1.192513_g63226_i0reverse_frame_1 - 1.7e-10 40.8 0.0 2e-10 40.6 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease Piezo_RRas_bdg PF12166.8 NODE_71164_length_222_cov_1.197861_g63223_i0reverse_frame_1 - 1.8e-06 27.5 0.0 1.9e-06 27.5 0.0 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain LRR_1 PF00560.33 NODE_71158_length_222_cov_1.262032_g63217_i0forward_frame_1 - 1.1 10.1 7.1 1.7 9.5 2.1 2.5 1 1 1 2 2 2 0 Leucine Rich Repeat Csm4_C PF17953.1 NODE_71156_length_222_cov_1.267380_g63215_i0reverse_frame_1 - 0.1 12.5 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 CRISPR Csm4 C-terminal domain BAG6 PF12057.8 NODE_71156_length_222_cov_1.267380_g63215_i0forward_frame_1 - 0.048 13.3 0.0 0.071 12.8 0.0 1.3 1 0 0 1 1 1 0 BCL2-associated athanogene 6 Mgm101p PF06420.12 NODE_71145_length_222_cov_1.283422_g63204_i0forward_frame_1 - 0.15 11.6 0.1 0.16 11.4 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial genome maintenance MGM101 AbiGi PF10899.8 NODE_71144_length_222_cov_1.283422_g63203_i0reverse_frame_1 - 0.2 11.5 0.1 0.23 11.3 0.1 1.1 1 0 0 1 1 1 0 Putative abortive phage resistance protein AbiGi, antitoxin EamA PF00892.20 NODE_71142_length_222_cov_1.283422_g63201_i0reverse_frame_1 - 0.041 14.1 4.2 0.044 13.9 4.2 1.1 1 0 0 1 1 1 0 EamA-like transporter family DUF4131 PF13567.6 NODE_71142_length_222_cov_1.283422_g63201_i0reverse_frame_1 - 3.5 7.2 5.1 4.4 6.9 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) FixS PF03597.15 NODE_71141_length_222_cov_1.283422_g63200_i0reverse_frame_1 - 0.044 13.5 2.3 0.099 12.4 2.3 1.7 1 1 0 1 1 1 0 Cytochrome oxidase maturation protein cbb3-type Mem_trans PF03547.18 NODE_71141_length_222_cov_1.283422_g63200_i0reverse_frame_1 - 0.47 8.8 5.2 0.47 8.8 5.2 1.0 1 0 0 1 1 1 0 Membrane transport protein IPT PF01745.16 NODE_71134_length_222_cov_1.347594_g63193_i0forward_frame_1 - 0.17 11.2 0.3 0.2 11.0 0.3 1.1 1 0 0 1 1 1 0 Isopentenyl transferase Adaptin_N PF01602.20 NODE_71132_length_222_cov_1.363636_g63191_i0forward_frame_1 - 1.3e-06 27.3 0.4 1.4e-06 27.2 0.4 1.0 1 0 0 1 1 1 1 Adaptin N terminal region IGFL PF14653.6 NODE_71129_length_222_cov_1.395722_g63188_i0reverse_frame_1 - 0.033 14.2 0.2 0.042 13.8 0.2 1.2 1 0 0 1 1 1 0 Insulin growth factor-like family JAB PF01398.21 NODE_71127_length_222_cov_1.406417_g63186_i0reverse_frame_1 - 0.0025 17.8 0.0 0.0026 17.7 0.0 1.1 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease DUF4170 PF13773.6 NODE_71127_length_222_cov_1.406417_g63186_i0reverse_frame_1 - 0.046 13.9 0.0 0.061 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4170) DUF2777 PF10949.8 NODE_71124_length_222_cov_1.411765_g63183_i0forward_frame_1 - 0.032 13.9 0.3 0.035 13.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2777) DUF1003 PF06210.11 NODE_71121_length_222_cov_1.449198_g63180_i0reverse_frame_1 - 0.13 12.4 3.7 0.078 13.1 2.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) ATP-synt_8 PF00895.20 NODE_71121_length_222_cov_1.449198_g63180_i0reverse_frame_1 - 5.8 7.5 6.8 1 9.9 1.4 2.0 2 0 0 2 2 2 0 ATP synthase protein 8 WW_FCH_linker PF16623.5 NODE_71121_length_222_cov_1.449198_g63180_i0forward_frame_1 - 0.0037 18.0 0.4 0.0044 17.7 0.4 1.1 1 0 0 1 1 1 1 Unstructured linker region between on GAS7 protein Il13Ra_Ig PF18001.1 NODE_71117_length_222_cov_1.475936_g63176_i0forward_frame_1 - 0.032 14.3 1.0 0.036 14.2 1.0 1.1 1 0 0 1 1 1 0 Interleukin-13 receptor subunit alpha Ig-like domain DUF249 PF03158.13 NODE_71116_length_222_cov_1.481283_g63175_i0forward_frame_1 - 0.12 12.1 3.9 0.14 11.8 3.9 1.3 1 1 0 1 1 1 0 Multigene family 530 protein ABC2_membrane PF01061.24 NODE_71115_length_222_cov_1.481283_g63174_i0forward_frame_1 - 3.9e-07 29.7 3.8 4.4e-07 29.5 3.8 1.0 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 NODE_71115_length_222_cov_1.481283_g63174_i0forward_frame_1 - 0.019 14.1 4.8 0.022 13.9 4.8 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Ank_4 PF13637.6 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 1.8e-15 57.1 0.0 6e-09 36.3 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 3.6e-12 46.2 0.0 0.002 18.5 0.0 3.0 3 0 0 3 3 3 3 Ankyrin repeat Ank_2 PF12796.7 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 8.3e-12 45.5 0.0 1.5e-11 44.7 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 7.8e-09 35.6 0.3 3.8e-05 23.9 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 9.2e-09 34.9 0.0 0.45 11.2 0.0 3.1 3 0 0 3 3 3 3 Ankyrin repeat Urocanase_N PF17391.2 NODE_71112_length_222_cov_1.497326_g63171_i0reverse_frame_1 - 0.07 12.8 0.0 0.082 12.6 0.0 1.0 1 0 0 1 1 1 0 Urocanase N-terminal domain zf-dskA_traR PF01258.17 NODE_71109_length_222_cov_1.502674_g63168_i0reverse_frame_1 - 0.038 13.9 5.6 0.14 12.1 5.6 1.9 1 1 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger DUF676 PF05057.14 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 7.6e-13 48.5 0.0 8.4e-13 48.3 0.0 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 0.0011 18.7 0.0 0.0011 18.7 0.0 1.1 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 0.0045 16.9 0.0 0.0045 16.9 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Lipase_3 PF01764.25 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 0.02 14.7 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Lipase (class 3) DUF915 PF06028.11 NODE_71108_length_222_cov_1.534759_g63167_i0reverse_frame_1 - 0.021 14.2 0.0 0.025 13.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) Penaeidin PF05927.11 NODE_71105_length_222_cov_1.561497_g63164_i0reverse_frame_1 - 0.049 14.4 0.1 0.06 14.1 0.1 1.1 1 0 0 1 1 1 0 Penaeidin Disintegrin PF00200.23 NODE_71103_length_222_cov_1.577540_g63162_i0forward_frame_1 - 1.2 10.0 6.7 1.4 9.7 6.7 1.2 1 0 0 1 1 1 0 Disintegrin zf-HC5HC2H_2 PF13832.6 NODE_71101_length_222_cov_1.593583_g63160_i0reverse_frame_1 - 0.015 15.4 2.2 0.018 15.2 2.2 1.1 1 0 0 1 1 1 0 PHD-zinc-finger like domain ATP-grasp_2 PF08442.10 NODE_71101_length_222_cov_1.593583_g63160_i0reverse_frame_1 - 0.032 13.8 0.0 0.035 13.7 0.0 1.0 1 0 0 1 1 1 0 ATP-grasp domain DUF2024 PF09630.10 NODE_71101_length_222_cov_1.593583_g63160_i0reverse_frame_1 - 0.28 11.1 2.9 0.5 10.3 1.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF2024) PseudoU_synth_2 PF00849.22 NODE_71100_length_222_cov_1.598930_g63159_i0forward_frame_1 - 2.9e-06 27.4 0.3 3.4e-06 27.2 0.3 1.1 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF1824 PF08854.10 NODE_71096_length_222_cov_1.620321_g63155_i0forward_frame_1 - 0.021 14.8 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1824) ORMDL PF04061.14 NODE_71095_length_222_cov_1.631016_g63154_i0forward_frame_1 - 0.003 17.4 0.0 0.0031 17.3 0.0 1.0 1 0 0 1 1 1 1 ORMDL family ClpS PF02617.17 NODE_71094_length_222_cov_1.647059_g63153_i0forward_frame_1 - 0.094 12.5 0.0 0.15 11.8 0.0 1.4 1 1 1 2 2 2 0 ATP-dependent Clp protease adaptor protein ClpS zf-UBR PF02207.20 NODE_71087_length_222_cov_1.695187_g63146_i0reverse_frame_1 - 0.024 14.8 1.4 0.04 14.1 1.4 1.4 1 1 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) FAM176 PF14851.6 NODE_71085_length_222_cov_1.705882_g63144_i0reverse_frame_1 - 0.072 12.8 0.1 0.074 12.7 0.1 1.0 1 0 0 1 1 1 0 FAM176 family Ribosomal_S12 PF17487.2 NODE_71085_length_222_cov_1.705882_g63144_i0forward_frame_1 - 0.00056 20.6 1.7 0.00059 20.5 1.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S12 Pam16 PF03656.13 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_1 - 0.21 11.6 3.4 0.24 11.4 3.4 1.1 1 0 0 1 1 1 0 Pam16 Syntaxin-18_N PF10496.9 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_1 - 3.1 8.1 7.2 4.8 7.5 7.2 1.3 1 1 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus TSP_1 PF00090.19 NODE_71076_length_222_cov_1.754011_g63135_i0reverse_frame_1 - 0.028 14.6 2.8 0.051 13.8 2.8 1.4 1 0 0 1 1 1 0 Thrombospondin type 1 domain DUF4719 PF15843.5 NODE_71076_length_222_cov_1.754011_g63135_i0forward_frame_1 - 0.063 13.4 0.1 0.071 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) ERGIC_N PF13850.6 NODE_71071_length_222_cov_1.802139_g63130_i0reverse_frame_1 - 0.032 14.6 0.1 0.04 14.3 0.1 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Myc_target_1 PF15179.6 NODE_71071_length_222_cov_1.802139_g63130_i0reverse_frame_1 - 0.077 12.9 0.0 0.079 12.9 0.0 1.1 1 0 0 1 1 1 0 Myc target protein 1 Na_Pi_cotrans PF02690.15 NODE_71068_length_222_cov_1.807487_g63127_i0reverse_frame_1 - 0.0018 18.4 0.1 0.0018 18.4 0.1 1.3 2 0 0 2 2 2 1 Na+/Pi-cotransporter DUF2613 PF11021.8 NODE_71068_length_222_cov_1.807487_g63127_i0reverse_frame_1 - 0.022 14.8 4.1 0.022 14.8 4.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2613) TMIE PF16038.5 NODE_71052_length_222_cov_2.032086_g63111_i0reverse_frame_1 - 2.9 7.8 6.6 1.4 8.9 4.5 1.5 1 1 0 1 1 1 0 TMIE protein BRK PF07533.16 NODE_71049_length_222_cov_2.053476_g63108_i0forward_frame_1 - 0.059 13.0 0.7 0.25 11.0 0.1 2.1 2 1 0 2 2 2 0 BRK domain TYW3 PF02676.14 NODE_71048_length_222_cov_2.053476_g63107_i0reverse_frame_1 - 0.22 10.9 1.3 0.24 10.7 1.3 1.1 1 0 0 1 1 1 0 Methyltransferase TYW3 Toxin_36 PF10550.9 NODE_71042_length_222_cov_2.133690_g63101_i0reverse_frame_1 - 0.86 11.1 4.3 2.1 9.9 0.2 2.3 2 0 0 2 2 2 0 Conantokin-G mollusc-toxin Phage_holin_3_3 PF16083.5 NODE_71032_length_222_cov_2.256684_g63091_i0forward_frame_1 - 0.014 15.5 0.1 0.017 15.2 0.1 1.1 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III Toxin_2 PF00451.19 NODE_71029_length_222_cov_2.283422_g63088_i0reverse_frame_1 - 0.22 11.8 3.2 0.32 11.3 0.5 2.1 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 AstE_AspA PF04952.14 NODE_71024_length_222_cov_2.320856_g63083_i0forward_frame_1 - 1.9e-16 60.0 0.0 2e-16 59.9 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family Tmpp129 PF10272.9 NODE_71023_length_222_cov_2.347594_g63082_i0forward_frame_1 - 0.2 10.9 1.9 0.25 10.6 1.9 1.1 1 0 0 1 1 1 0 Putative transmembrane protein precursor SRTM1 PF15872.5 NODE_71021_length_222_cov_2.352941_g63080_i0reverse_frame_1 - 0.48 10.6 6.4 0.67 10.1 6.3 1.3 1 1 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 SwrA PF17423.2 NODE_71002_length_222_cov_2.962567_g63061_i0forward_frame_1 - 0.077 13.0 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Swarming motility protein zf-TAZ PF02135.16 NODE_71000_length_222_cov_3.048128_g63059_i0forward_frame_1 - 0.014 15.8 1.4 0.018 15.5 1.4 1.2 1 0 0 1 1 1 0 TAZ zinc finger TMEM238 PF15125.6 NODE_70999_length_222_cov_3.106952_g63058_i0reverse_frame_1 - 0.04 14.1 0.6 0.054 13.7 0.6 1.2 1 0 0 1 1 1 0 TMEM238 protein family CytB6-F_Fe-S PF08802.10 NODE_70999_length_222_cov_3.106952_g63058_i0reverse_frame_1 - 0.078 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit DUF3040 PF11239.8 NODE_70999_length_222_cov_3.106952_g63058_i0reverse_frame_1 - 0.1 12.8 0.0 0.16 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) Tnp_22_dsRBD PF17490.2 NODE_70997_length_222_cov_3.213904_g63056_i0reverse_frame_1 - 0.2 11.7 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 L1 transposable element dsRBD-like domain Kinesin PF00225.23 NODE_70991_length_222_cov_3.566845_g63050_i0reverse_frame_1 - 1.2e-15 57.3 0.1 1.2e-15 57.3 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_70991_length_222_cov_3.566845_g63050_i0reverse_frame_1 - 9.2e-05 22.4 0.1 0.00011 22.2 0.1 1.1 1 0 0 1 1 1 1 Microtubule binding 53-BP1_Tudor PF09038.10 NODE_70990_length_222_cov_3.625668_g63049_i0forward_frame_1 - 0.077 13.0 0.0 0.08 12.9 0.0 1.1 1 0 0 1 1 1 0 Tumour suppressor p53-binding protein-1 Tudor MBOAT_2 PF13813.6 NODE_70989_length_222_cov_3.732620_g63048_i0forward_frame_1 - 0.96 9.8 6.0 1.3 9.3 6.0 1.3 1 1 0 1 1 1 0 Membrane bound O-acyl transferase family Na_sulph_symp PF00939.19 NODE_70979_length_222_cov_6.037433_g63038_i0forward_frame_1 - 0.1 11.6 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Sodium:sulfate symporter transmembrane region Bradykinin PF06753.12 NODE_70970_length_222_cov_29.331551_g63029_i0forward_frame_1 - 7.9 6.3 9.7 5.3 6.9 0.4 2.9 3 0 0 3 3 3 0 Bradykinin NPCC PF08058.11 NODE_70963_length_222_cov_35.315508_g63022_i0forward_frame_1 - 0.59 10.2 2.2 0.66 10.0 2.2 1.1 1 0 0 1 1 1 0 Nuclear pore complex component DUF148 PF02520.17 NODE_70962_length_222_cov_38.716578_g63021_i0reverse_frame_1 - 0.0088 16.1 3.4 0.61 10.2 0.2 2.1 1 1 0 1 1 1 1 Domain of unknown function DUF148 DUF3385 PF11865.8 NODE_70962_length_222_cov_38.716578_g63021_i0reverse_frame_1 - 0.067 13.1 0.2 0.077 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) PAS_7 PF12860.7 NODE_70962_length_222_cov_38.716578_g63021_i0reverse_frame_1 - 0.087 13.0 0.0 0.096 12.9 0.0 1.1 1 0 0 1 1 1 0 PAS fold TrkH PF02386.16 NODE_70961_length_222_cov_39.486631_g63020_i0forward_frame_1 - 0.037 12.5 5.2 0.041 12.3 5.2 1.0 1 0 0 1 1 1 0 Cation transport protein DUSP PF06337.12 NODE_70956_length_222_cov_45.219251_g63015_i0reverse_frame_1 - 0.0014 19.2 1.5 0.0017 18.9 0.8 1.5 1 1 0 1 1 1 1 DUSP domain SnoaL PF07366.12 NODE_70953_length_222_cov_46.470588_g63012_i0reverse_frame_1 - 0.091 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 SnoaL-like polyketide cyclase Skp1 PF01466.19 NODE_70952_length_222_cov_46.502674_g63011_i0reverse_frame_1 - 0.039 14.1 0.0 0.057 13.5 0.0 1.3 1 0 0 1 1 1 0 Skp1 family, dimerisation domain DUF2628 PF10947.8 NODE_70952_length_222_cov_46.502674_g63011_i0forward_frame_1 - 1 9.8 5.5 1.1 9.7 5.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) OxoDH_E1alpha_N PF12573.8 NODE_70946_length_222_cov_51.315508_g63005_i0forward_frame_1 - 0.077 12.8 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal Vac_ImportDeg PF09783.9 NODE_70938_length_222_cov_57.491979_g62997_i0forward_frame_1 - 0.18 11.6 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 Vacuolar import and degradation protein UPAR_LY6_2 PF16975.5 NODE_70926_length_222_cov_95.529412_g62985_i0reverse_frame_1 - 0.038 14.2 0.3 0.041 14.1 0.3 1.2 1 0 0 1 1 1 0 Ly6/PLAUR domain-containing protein 6, Lypd6 DUF3339 PF11820.8 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_1 - 0.046 13.9 0.1 0.072 13.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3339) BPD_transp_2 PF02653.16 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_1 - 0.068 12.3 2.0 0.071 12.3 2.0 1.0 1 0 0 1 1 1 0 Branched-chain amino acid transport system / permease component Ribosomal_60s PF00428.19 NODE_70921_length_222_cov_113.379679_g62980_i0forward_frame_1 - 1e-05 26.0 11.6 1e-05 26.0 11.6 1.6 2 0 0 2 2 2 1 60s Acidic ribosomal protein RNA_polI_A34 PF08208.11 NODE_70921_length_222_cov_113.379679_g62980_i0forward_frame_1 - 0.0055 16.8 3.3 0.0055 16.8 3.3 1.1 1 0 0 1 1 1 1 DNA-directed RNA polymerase I subunit RPA34.5 SMC_ScpA PF02616.14 NODE_70920_length_222_cov_114.491979_g62979_i0reverse_frame_1 - 0.11 12.3 2.1 0.13 12.1 2.1 1.0 1 0 0 1 1 1 0 Segregation and condensation protein ScpA FAM176 PF14851.6 NODE_70920_length_222_cov_114.491979_g62979_i0reverse_frame_1 - 0.16 11.6 2.9 0.18 11.5 2.9 1.1 1 0 0 1 1 1 0 FAM176 family DUF4611 PF15387.6 NODE_70920_length_222_cov_114.491979_g62979_i0reverse_frame_1 - 0.76 10.0 7.5 1.1 9.5 7.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) DUF5480 PF17576.2 NODE_70920_length_222_cov_114.491979_g62979_i0forward_frame_1 - 0.77 9.8 4.2 0.21 11.6 1.5 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5480) DarA_N PF18788.1 NODE_70918_length_222_cov_118.877005_g62977_i0reverse_frame_1 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Defence against restriction A N-terminal RCC1_2 PF13540.6 NODE_70918_length_222_cov_118.877005_g62977_i0forward_frame_1 - 0.036 13.9 0.1 0.055 13.3 0.1 1.3 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat DNA_pack_N PF02500.15 NODE_70912_length_222_cov_158.534759_g62971_i0forward_frame_1 - 0.051 13.4 0.1 0.052 13.4 0.1 1.0 1 0 0 1 1 1 0 Probable DNA packing protein, N-terminus Toxin_29 PF08116.11 NODE_70912_length_222_cov_158.534759_g62971_i0forward_frame_1 - 0.28 11.2 0.3 0.28 11.2 0.3 2.5 3 1 0 3 3 3 0 PhTx neurotoxin family Glyco_hydro_31 PF01055.26 NODE_70907_length_222_cov_195.604278_g62966_i0reverse_frame_1 - 0.00039 19.7 0.0 0.00045 19.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 HATPase_c_2 PF13581.6 NODE_70898_length_222_cov_1657.278075_g62957_i0reverse_frame_1 - 0.091 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF4131 PF13567.6 NODE_70898_length_222_cov_1657.278075_g62957_i0forward_frame_1 - 0.15 11.7 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3487 PF11990.8 NODE_70897_length_222_cov_82495.946524_g62956_i0reverse_frame_1 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) V_cholerae_RfbT PF05575.11 NODE_70896_length_223_cov_0.840426_g62955_i0reverse_frame_3 - 0.017 14.4 0.1 0.018 14.3 0.1 1.1 1 0 0 1 1 1 0 Vibrio cholerae RfbT protein HypA PF01155.19 NODE_70894_length_223_cov_0.845745_g62953_i0reverse_frame_3 - 0.071 13.1 0.1 0.073 13.1 0.1 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF5332 PF17266.2 NODE_70893_length_223_cov_0.845745_g62952_i0reverse_frame_3 - 1.1 8.9 9.5 1.2 8.8 9.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5332) RhoGEF67_u1 PF16615.5 NODE_70891_length_223_cov_0.851064_g62950_i0forward_frame_3 - 0.045 14.3 8.2 0.045 14.3 8.2 1.8 2 1 0 2 2 2 0 Unstructured region one on RhoGEF 6 and 7 Rsm1 PF08600.10 NODE_70891_length_223_cov_0.851064_g62950_i0forward_frame_2 - 0.0034 17.5 0.2 0.0038 17.4 0.2 1.2 1 0 0 1 1 1 1 Rsm1-like DUF842 PF05811.13 NODE_70891_length_223_cov_0.851064_g62950_i0forward_frame_2 - 0.28 10.9 3.8 0.6 9.8 3.9 1.5 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) DUF3364 PF11844.8 NODE_70890_length_223_cov_0.851064_g62949_i0reverse_frame_3 - 0.038 14.2 0.2 0.061 13.6 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) Stm1_N PF09598.10 NODE_70889_length_223_cov_0.851064_g62948_i0reverse_frame_3 - 0.064 14.1 2.3 0.078 13.8 2.3 1.1 1 0 0 1 1 1 0 Stm1 Viral_DNA_bp PF00747.17 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_3 - 0.015 12.5 0.3 0.016 12.4 0.3 1.0 1 0 0 1 1 1 0 ssDNA binding protein Zn_ribbon_17 PF17120.5 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_2 - 0.027 14.1 0.9 0.04 13.6 0.9 1.3 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_2 PF13639.6 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_2 - 0.15 12.4 5.3 0.33 11.3 5.5 1.4 1 1 0 1 1 1 0 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_2 - 0.33 10.8 5.8 5.8 6.9 6.9 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C2H2_4 PF13894.6 NODE_70888_length_223_cov_0.851064_g62947_i0reverse_frame_2 - 2 9.5 8.4 0.3 12.0 3.6 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Gemini_AL1_M PF08283.11 NODE_70882_length_223_cov_0.861702_g62941_i0forward_frame_3 - 0.087 12.9 0.3 0.1 12.7 0.3 1.2 1 0 0 1 1 1 0 Geminivirus rep protein central domain CarbpepA_inh PF02977.15 NODE_70880_length_223_cov_0.904255_g62939_i0forward_frame_3 - 0.057 13.2 0.7 0.21 11.4 0.8 1.9 2 0 0 2 2 2 0 Carboxypeptidase A inhibitor PNKP_ligase PF16542.5 NODE_70877_length_223_cov_0.962766_g62936_i0reverse_frame_2 - 0.03 13.8 0.0 0.033 13.7 0.0 1.0 1 0 0 1 1 1 0 PNKP adenylyltransferase domain, ligase domain DUF4031 PF13223.6 NODE_70876_length_223_cov_0.962766_g62935_i0reverse_frame_2 - 0.1 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4031) HTH_Mga PF08280.11 NODE_70871_length_223_cov_1.037234_g62930_i0forward_frame_3 - 0.097 12.7 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain PPTA PF01239.22 NODE_70870_length_223_cov_1.042553_g62929_i0reverse_frame_3 - 6.8e-13 47.9 10.4 8.2e-07 28.6 0.3 3.0 3 0 0 3 3 3 2 Protein prenyltransferase alpha subunit repeat Retrotran_gag_3 PF14244.6 NODE_70870_length_223_cov_1.042553_g62929_i0reverse_frame_3 - 0.087 12.6 0.2 3.6 7.5 0.1 2.2 2 0 0 2 2 2 0 gag-polypeptide of LTR copia-type DUF4219 PF13961.6 NODE_70870_length_223_cov_1.042553_g62929_i0reverse_frame_3 - 0.86 9.3 4.9 12 5.8 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4219) Ssl1 PF04056.14 NODE_70868_length_223_cov_1.053191_g62927_i0reverse_frame_2 - 4.5e-12 46.2 0.1 5e-12 46.0 0.1 1.0 1 0 0 1 1 1 1 Ssl1-like Peptidase_S30 PF01577.16 NODE_70866_length_223_cov_1.063830_g62925_i0reverse_frame_3 - 0.9 9.1 16.3 0.99 9.0 16.3 1.0 1 0 0 1 1 1 0 Potyvirus P1 protease Dpy-30 PF05186.13 NODE_70866_length_223_cov_1.063830_g62925_i0forward_frame_3 - 2.5 7.9 4.0 12 5.7 0.3 2.6 3 0 0 3 3 3 0 Dpy-30 motif Calici_PP_N PF08405.11 NODE_70864_length_223_cov_1.079787_g62923_i0forward_frame_3 - 0.025 13.4 0.2 0.027 13.3 0.2 1.0 1 0 0 1 1 1 0 Viral polyprotein N-terminal Arm PF00514.23 NODE_70863_length_223_cov_1.127660_g62922_i0reverse_frame_3 - 0.02 14.9 0.0 0.056 13.5 0.1 1.7 1 1 1 2 2 2 0 Armadillo/beta-catenin-like repeat Tsi6 PF18660.1 NODE_70855_length_223_cov_1.196809_g62914_i0reverse_frame_3 - 0.16 12.1 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Tsi6 Herpes_UL69 PF05459.12 NODE_70852_length_223_cov_1.228723_g62911_i0reverse_frame_3 - 0.025 13.9 1.2 0.029 13.7 1.2 1.0 1 0 0 1 1 1 0 Herpesvirus transcriptional regulator family DUF1125 PF06563.11 NODE_70851_length_223_cov_1.228723_g62910_i0forward_frame_3 - 0.095 12.6 0.3 0.2 11.6 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1125) DUF5324 PF17258.2 NODE_70845_length_223_cov_1.255319_g62904_i0reverse_frame_3 - 0.041 13.6 0.0 0.043 13.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5324) Alfin PF12165.8 NODE_70845_length_223_cov_1.255319_g62904_i0reverse_frame_2 - 0.12 12.0 0.0 0.17 11.5 0.0 1.3 1 1 0 1 1 1 0 Alfin DUF359 PF04019.12 NODE_70845_length_223_cov_1.255319_g62904_i0reverse_frame_2 - 0.18 11.4 0.0 0.26 10.9 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF359) RXT2_N PF08595.11 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 1 9.4 4.1 1.3 9.1 4.1 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal CDC45 PF02724.14 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 1.7 6.8 4.1 1.5 7.0 4.1 1.0 1 0 0 1 1 1 0 CDC45-like protein NOA36 PF06524.12 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 1.7 7.9 15.3 1.7 7.9 15.3 1.1 1 0 0 1 1 1 0 NOA36 protein FAM176 PF14851.6 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 4.1 7.0 4.6 6.7 6.4 4.6 1.4 1 1 0 1 1 1 0 FAM176 family DUF2076 PF09849.9 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 5.2 7.0 8.4 5.5 7.0 8.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) RNA_pol_3_Rpc31 PF11705.8 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 6.2 7.0 17.9 6.8 6.9 17.9 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 RRN3 PF05327.11 NODE_70844_length_223_cov_1.255319_g62903_i0reverse_frame_2 - 9.1 4.7 6.6 8 4.9 6.6 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Rab_eff_C PF04698.12 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_3 - 0.0026 16.1 1.6 0.0028 16.1 1.6 1.0 1 0 0 1 1 1 1 Rab effector MyRIP/melanophilin C-terminus SR-25 PF10500.9 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_3 - 1.7 8.2 12.4 2.1 7.9 12.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF1180 PF06679.12 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_2 - 0.058 13.8 0.4 0.068 13.6 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) TMEM154 PF15102.6 NODE_70844_length_223_cov_1.255319_g62903_i0forward_frame_2 - 0.14 12.0 4.9 0.17 11.8 4.9 1.1 1 0 0 1 1 1 0 TMEM154 protein family RuBisCO_small PF00101.20 NODE_70843_length_223_cov_1.265957_g62902_i0forward_frame_3 - 0.038 14.0 0.6 0.045 13.8 0.6 1.1 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain Sod_Ni PF09055.11 NODE_70836_length_223_cov_1.271277_g62895_i0forward_frame_3 - 0.034 14.7 0.0 0.037 14.6 0.0 1.1 1 0 0 1 1 1 0 Nickel-containing superoxide dismutase LANC_like PF05147.13 NODE_70833_length_223_cov_1.276596_g62892_i0reverse_frame_3 - 0.069 11.7 1.0 0.061 11.9 1.0 1.1 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein SlyX PF04102.12 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.0083 16.7 4.6 0.0094 16.5 4.6 1.1 1 0 0 1 1 1 1 SlyX DUF4404 PF14357.6 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.011 16.4 1.6 0.013 16.2 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) PKcGMP_CC PF16808.5 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.039 13.8 0.7 1 9.2 0.1 2.1 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Spc42p PF11544.8 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.042 13.8 0.0 0.052 13.6 0.0 1.1 1 0 0 1 1 1 0 Spindle pole body component Spc42p LpoB PF13036.6 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 0.059 13.3 1.0 0.064 13.2 1.0 1.0 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB DUF3138 PF11336.8 NODE_70832_length_223_cov_1.276596_g62891_i0forward_frame_2 - 1.1 7.8 6.1 1.2 7.6 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) Imm70 PF15601.6 NODE_70830_length_223_cov_1.276596_g62889_i0forward_frame_2 - 0.015 14.8 0.0 0.02 14.5 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 70 AZUL PF16558.5 NODE_70829_length_223_cov_1.303191_g62888_i0forward_frame_3 - 4.2 7.7 8.6 4.5 7.6 6.9 1.8 1 1 1 2 2 2 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A Metallophos PF00149.28 NODE_70828_length_223_cov_1.324468_g62887_i0reverse_frame_2 - 2.2e-05 25.0 0.2 2.6e-05 24.8 0.2 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DAO PF01266.24 NODE_70827_length_223_cov_1.329787_g62886_i0reverse_frame_3 - 0.0057 16.3 2.1 0.0069 16.0 2.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 NODE_70827_length_223_cov_1.329787_g62886_i0reverse_frame_3 - 0.0069 15.6 0.0 0.0072 15.6 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase PRESAN PF09687.10 NODE_70827_length_223_cov_1.329787_g62886_i0forward_frame_2 - 0.017 15.7 0.6 0.021 15.4 0.6 1.2 1 0 0 1 1 1 0 Plasmodium RESA N-terminal SoDot-IcmSS PF16848.5 NODE_70824_length_223_cov_1.377660_g62883_i0reverse_frame_3 - 0.081 12.9 0.4 0.083 12.9 0.4 1.1 1 0 0 1 1 1 0 Substrate of the Dot/Icm secretion system, putative CM_1 PF07736.11 NODE_70823_length_223_cov_1.382979_g62882_i0reverse_frame_3 - 0.00066 20.1 0.2 0.0013 19.1 0.2 1.5 1 1 1 2 2 2 1 Chorismate mutase type I Spc7_C2 PF15577.6 NODE_70822_length_223_cov_1.388298_g62881_i0reverse_frame_2 - 0.16 12.1 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Spc7_C2 FAM76 PF16046.5 NODE_70819_length_223_cov_1.409574_g62878_i0forward_frame_2 - 0.033 13.6 0.1 0.035 13.5 0.1 1.0 1 0 0 1 1 1 0 FAM76 protein DUF1759 PF03564.15 NODE_70818_length_223_cov_1.409574_g62877_i0forward_frame_3 - 0.09 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1759) Sialidase PF02973.16 NODE_70812_length_223_cov_1.484043_g62871_i0reverse_frame_2 - 0.16 11.5 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Sialidase, N-terminal domain Mito_carr PF00153.27 NODE_70811_length_223_cov_1.484043_g62870_i0reverse_frame_3 - 1.6e-09 37.6 0.0 2.1e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein Mob1_phocein PF03637.17 NODE_70811_length_223_cov_1.484043_g62870_i0forward_frame_3 - 0.18 11.8 5.2 0.55 10.2 5.3 1.7 1 1 0 1 1 1 0 Mob1/phocein family MMR_HSR1_Xtn PF16897.5 NODE_70810_length_223_cov_1.484043_g62869_i0forward_frame_2 - 0.019 14.9 1.3 0.02 14.9 1.3 1.3 1 1 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Orf78 PF06024.12 NODE_70809_length_223_cov_1.489362_g62868_i0reverse_frame_2 - 0.035 14.4 1.4 0.035 14.4 1.4 1.7 1 1 1 2 2 2 0 Orf78 (ac78) DnaB_2 PF07261.11 NODE_70809_length_223_cov_1.489362_g62868_i0reverse_frame_2 - 0.12 12.2 0.5 0.15 11.8 0.4 1.3 1 1 0 1 1 1 0 Replication initiation and membrane attachment HTH_Tnp_Tc3_1 PF11427.8 NODE_70807_length_223_cov_1.489362_g62866_i0reverse_frame_2 - 0.042 13.7 0.2 0.057 13.3 0.2 1.3 1 1 0 1 1 1 0 Tc3 transposase Chorein_N PF12624.7 NODE_70807_length_223_cov_1.489362_g62866_i0forward_frame_3 - 0.098 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 N-terminal region of Chorein or VPS13 Acyltransferase PF01553.21 NODE_70805_length_223_cov_1.489362_g62864_i0reverse_frame_3 - 0.00066 19.3 0.0 0.0007 19.2 0.0 1.1 1 0 0 1 1 1 1 Acyltransferase DUF4448 PF14610.6 NODE_70803_length_223_cov_1.515957_g62862_i0reverse_frame_2 - 4.1 7.1 5.5 4.8 6.9 5.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) RhodobacterPufX PF11511.8 NODE_70803_length_223_cov_1.515957_g62862_i0reverse_frame_2 - 8.7 6.0 9.4 17 5.1 9.4 1.6 1 1 0 1 1 1 0 Intrinsic membrane protein PufX DUF1636 PF07845.11 NODE_70793_length_223_cov_1.611702_g62852_i0reverse_frame_3 - 0.037 14.5 0.1 0.037 14.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) DUF865 PF05906.11 NODE_70792_length_223_cov_1.617021_g62851_i0reverse_frame_2 - 0.04 13.7 1.9 0.076 12.8 1.9 1.5 1 0 0 1 1 1 0 Herpesvirus-7 repeat of unknown function (DUF865) DUF2610 PF11020.8 NODE_70790_length_223_cov_1.632979_g62849_i0reverse_frame_3 - 0.039 13.8 0.1 0.051 13.5 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) rve PF00665.26 NODE_70786_length_223_cov_1.675532_g62845_i0forward_frame_3 - 2.9e-05 24.2 0.0 3e-05 24.2 0.0 1.0 1 0 0 1 1 1 1 Integrase core domain Utp14 PF04615.13 NODE_70784_length_223_cov_1.686170_g62843_i0forward_frame_3 - 7e-16 58.0 4.4 7.9e-16 57.8 4.4 1.0 1 0 0 1 1 1 1 Utp14 protein Snurportin1 PF11538.8 NODE_70784_length_223_cov_1.686170_g62843_i0forward_frame_3 - 0.64 10.3 8.7 1.1 9.5 8.7 1.4 1 0 0 1 1 1 0 Snurportin1 QWRF PF04484.12 NODE_70782_length_223_cov_1.691489_g62841_i0reverse_frame_3 - 7.4 6.2 8.5 7.5 6.2 8.5 1.1 1 0 0 1 1 1 0 QWRF family F_actin_bund_C PF18060.1 NODE_70782_length_223_cov_1.691489_g62841_i0reverse_frame_2 - 0.12 12.5 1.5 0.13 12.4 1.5 1.1 1 0 0 1 1 1 0 F actin bundling C terminal EB PF01683.18 NODE_70782_length_223_cov_1.691489_g62841_i0forward_frame_2 - 1.9 8.9 12.1 41 4.6 12.1 2.6 1 1 0 1 1 1 0 EB module Toxin_35 PF10530.9 NODE_70782_length_223_cov_1.691489_g62841_i0forward_frame_2 - 2.1 8.4 10.2 0.96 9.5 0.5 2.4 1 1 1 2 2 2 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold P22_Cro PF14549.6 NODE_70781_length_223_cov_1.691489_g62840_i0forward_frame_2 - 0.13 12.1 0.0 7.2 6.5 0.0 2.1 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro DUF3634 PF12321.8 NODE_70775_length_223_cov_1.702128_g62834_i0reverse_frame_3 - 0.05 14.0 0.9 0.1 13.0 0.7 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3634) zf-like PF04071.12 NODE_70775_length_223_cov_1.702128_g62834_i0reverse_frame_2 - 0.011 15.6 3.8 0.015 15.2 3.7 1.3 1 1 0 1 1 1 0 Cysteine-rich small domain Ferlin_C PF16165.5 NODE_70775_length_223_cov_1.702128_g62834_i0forward_frame_3 - 3.4 7.6 4.9 3.8 7.5 4.9 1.1 1 0 0 1 1 1 0 Ferlin C-terminus Ferlin_C PF16165.5 NODE_70774_length_223_cov_1.702128_g62833_i0forward_frame_2 - 7.8 6.4 6.4 9.5 6.1 6.4 1.2 1 0 0 1 1 1 0 Ferlin C-terminus DRIM PF07539.12 NODE_70773_length_223_cov_1.702128_g62832_i0forward_frame_3 - 0.079 11.2 0.0 0.095 11.0 0.0 1.0 1 0 0 1 1 1 0 Down-regulated in metastasis FAM76 PF16046.5 NODE_70771_length_223_cov_1.739362_g62830_i0forward_frame_2 - 0.0035 16.8 1.9 0.0037 16.7 1.9 1.1 1 0 0 1 1 1 1 FAM76 protein DUF4510 PF14971.6 NODE_70771_length_223_cov_1.739362_g62830_i0forward_frame_2 - 0.059 13.7 0.2 0.073 13.4 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4510) GARS_N PF02844.15 NODE_70770_length_223_cov_1.760638_g62829_i0reverse_frame_3 - 0.095 13.5 0.0 0.1 13.4 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, N domain ABC2_membrane_3 PF12698.7 NODE_70769_length_223_cov_1.787234_g62828_i0reverse_frame_3 - 0.11 11.5 13.9 0.12 11.4 13.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Phage_holin_4_1 PF05105.12 NODE_70767_length_223_cov_1.797872_g62826_i0forward_frame_3 - 0.00033 20.8 0.0 0.0004 20.5 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage holin family PI3K_p85B PF02192.16 NODE_70764_length_223_cov_1.824468_g62823_i0forward_frame_3 - 0.15 11.8 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 PI3-kinase family, p85-binding domain RE_SinI PF09570.10 NODE_70763_length_223_cov_1.840426_g62822_i0reverse_frame_3 - 0.016 14.5 0.1 0.019 14.2 0.1 1.0 1 0 0 1 1 1 0 SinI restriction endonuclease Aminotran_1_2 PF00155.21 NODE_70762_length_223_cov_1.845745_g62821_i0forward_frame_2 - 0.026 13.7 0.0 0.026 13.7 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II PH_12 PF16457.5 NODE_70761_length_223_cov_1.851064_g62820_i0forward_frame_3 - 0.01 16.4 0.2 0.011 16.2 0.2 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain DUF4346 PF14251.6 NODE_70761_length_223_cov_1.851064_g62820_i0forward_frame_3 - 0.066 13.3 0.2 0.091 12.8 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4346) DUF1644 PF07800.12 NODE_70759_length_223_cov_1.893617_g62818_i0forward_frame_2 - 0.54 10.3 7.4 0.73 9.9 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) Fijivirus_P9-2 PF06837.11 NODE_70757_length_223_cov_1.909574_g62816_i0forward_frame_3 - 0.015 14.8 0.4 0.016 14.7 0.4 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein UPF0139 PF03669.13 NODE_70753_length_223_cov_2.010638_g62812_i0reverse_frame_2 - 0.12 12.2 0.7 0.17 11.8 0.7 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0139) Herpes_pp85 PF04637.12 NODE_70753_length_223_cov_2.010638_g62812_i0reverse_frame_2 - 0.13 10.7 1.4 0.13 10.7 1.4 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) YWFCY PF14293.6 NODE_70752_length_223_cov_2.015957_g62811_i0reverse_frame_3 - 1.5 9.2 7.0 2.7 8.3 2.3 2.3 1 1 1 2 2 2 0 YWFCY protein IQ PF00612.27 NODE_70752_length_223_cov_2.015957_g62811_i0forward_frame_3 - 5e-05 22.7 0.2 5e-05 22.7 0.2 1.6 2 0 0 2 2 2 1 IQ calmodulin-binding motif DUF5411 PF17424.2 NODE_70752_length_223_cov_2.015957_g62811_i0forward_frame_2 - 0.047 13.6 0.1 0.051 13.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5411) ydhR PF08803.11 NODE_70750_length_223_cov_2.021277_g62809_i0reverse_frame_3 - 0.057 13.3 0.1 0.063 13.2 0.1 1.1 1 0 0 1 1 1 0 Putative mono-oxygenase ydhR TMEM126 PF07114.11 NODE_70750_length_223_cov_2.021277_g62809_i0forward_frame_3 - 0.0097 15.3 0.1 0.011 15.1 0.1 1.1 1 0 0 1 1 1 1 Transmembrane protein 126 DUF202 PF02656.15 NODE_70749_length_223_cov_2.031915_g62808_i0forward_frame_3 - 0.02 15.3 2.2 0.037 14.5 0.4 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF202) COX4 PF02936.14 NODE_70749_length_223_cov_2.031915_g62808_i0forward_frame_3 - 0.18 11.8 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV Pex24p PF06398.11 NODE_70748_length_223_cov_2.042553_g62807_i0reverse_frame_2 - 0.025 13.6 3.1 0.028 13.4 3.1 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin GAPES4 PF17157.4 NODE_70747_length_223_cov_2.053191_g62806_i0reverse_frame_2 - 0.021 15.2 0.1 0.025 15.0 0.1 1.2 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain SNARE PF05739.19 NODE_70747_length_223_cov_2.053191_g62806_i0reverse_frame_2 - 0.086 12.9 0.8 0.14 12.2 0.8 1.3 1 0 0 1 1 1 0 SNARE domain DUF3262 PF11660.8 NODE_70742_length_223_cov_2.106383_g62801_i0reverse_frame_3 - 0.057 13.8 0.9 0.068 13.6 0.9 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3262) Comm PF15957.5 NODE_70742_length_223_cov_2.106383_g62801_i0reverse_frame_3 - 0.17 12.3 1.5 0.19 12.1 1.5 1.2 1 0 0 1 1 1 0 Commissureless Otopetrin PF03189.13 NODE_70742_length_223_cov_2.106383_g62801_i0reverse_frame_3 - 0.17 10.6 3.2 0.17 10.7 3.2 1.0 1 0 0 1 1 1 0 Otopetrin PIP49_N PF14875.6 NODE_70742_length_223_cov_2.106383_g62801_i0reverse_frame_3 - 0.59 10.0 3.4 0.69 9.8 3.4 1.2 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 Baculo_p24 PF05073.12 NODE_70742_length_223_cov_2.106383_g62801_i0reverse_frame_2 - 0.13 12.1 0.1 0.16 11.8 0.1 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein Aa_trans PF01490.18 NODE_70738_length_223_cov_2.186170_g62797_i0forward_frame_3 - 6e-05 21.9 1.6 6.1e-05 21.9 1.6 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein ADD_ATRX PF17981.1 NODE_70738_length_223_cov_2.186170_g62797_i0forward_frame_2 - 0.012 15.4 0.2 0.068 13.1 0.1 1.9 1 1 1 2 2 2 0 Cysteine Rich ADD domain Lamprin PF06403.11 NODE_70737_length_223_cov_2.212766_g62796_i0forward_frame_3 - 0.015 15.2 0.7 0.019 14.9 0.7 1.2 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_70737_length_223_cov_2.212766_g62796_i0forward_frame_2 - 0.00042 20.3 8.2 0.0005 20.0 8.2 1.2 1 0 0 1 1 1 1 Lamprin DUF5360 PF17314.2 NODE_70736_length_223_cov_2.228723_g62795_i0reverse_frame_3 - 0.086 12.9 0.1 0.097 12.7 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5360) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks363.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks363.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks363.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks363.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Conotoxin_I2 PF17557.2 NODE_70734_length_223_cov_2.281915_g62793_i0forward_frame_3 - 0.024 14.8 9.2 0.47 10.6 1.5 2.6 2 0 0 2 2 2 0 I2-superfamily conotoxins F-box PF00646.33 NODE_70734_length_223_cov_2.281915_g62793_i0forward_frame_3 - 0.033 14.1 0.1 0.055 13.4 0.1 1.3 1 0 0 1 1 1 0 F-box domain IL13 PF03487.13 NODE_70734_length_223_cov_2.281915_g62793_i0forward_frame_2 - 0.017 14.9 0.4 0.019 14.7 0.4 1.1 1 0 0 1 1 1 0 Interleukin-13 WD40_like PF17005.5 NODE_70731_length_223_cov_2.329787_g62790_i0forward_frame_3 - 0.017 14.5 1.7 0.019 14.3 1.7 1.0 1 0 0 1 1 1 0 WD40-like domain PTCRA PF15028.6 NODE_70730_length_223_cov_2.340426_g62789_i0reverse_frame_3 - 0.012 15.2 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Pre-T-cell antigen receptor CLIP_SPH_mas PF18398.1 NODE_70730_length_223_cov_2.340426_g62789_i0forward_frame_3 - 0.081 13.3 1.3 0.081 13.3 1.3 1.4 2 0 0 2 2 2 0 Clip-domain serine protease homolog masquerade DUF553 PF04473.12 NODE_70728_length_223_cov_2.388298_g62787_i0forward_frame_2 - 0.083 12.4 0.1 0.098 12.2 0.1 1.2 1 0 0 1 1 1 0 Transglutaminase-like domain IMUP PF15761.5 NODE_70724_length_223_cov_2.500000_g62783_i0reverse_frame_3 - 0.026 15.2 4.1 0.029 15.1 4.1 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_70724_length_223_cov_2.500000_g62783_i0reverse_frame_3 - 0.034 13.7 5.3 0.035 13.7 5.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF5101 PF17031.5 NODE_70723_length_223_cov_2.510638_g62782_i0forward_frame_2 - 0.08 13.0 0.1 0.096 12.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) DIOX_N PF14226.6 NODE_70722_length_223_cov_2.537234_g62781_i0reverse_frame_3 - 0.016 16.0 0.0 0.018 15.8 0.0 1.1 1 0 0 1 1 1 0 non-haem dioxygenase in morphine synthesis N-terminal HK97-gp10_like PF04883.12 NODE_70722_length_223_cov_2.537234_g62781_i0reverse_frame_2 - 0.099 13.6 0.1 0.12 13.4 0.1 1.2 1 0 0 1 1 1 0 Bacteriophage HK97-gp10, putative tail-component DUF624 PF04854.14 NODE_70717_length_223_cov_2.611702_g62776_i0forward_frame_2 - 0.0033 17.5 0.8 0.0056 16.8 0.8 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF624 WLM PF08325.10 NODE_70714_length_223_cov_2.654255_g62773_i0reverse_frame_3 - 0.054 13.5 0.0 0.065 13.3 0.0 1.1 1 0 0 1 1 1 0 WLM domain Meleagrin PF08189.11 NODE_70714_length_223_cov_2.654255_g62773_i0reverse_frame_3 - 1.6 8.5 9.9 0.26 11.0 6.2 1.6 2 0 0 2 2 2 0 Meleagrin/Cygnin family Hemagglutinin PF00509.18 NODE_70714_length_223_cov_2.654255_g62773_i0forward_frame_2 - 1.7 7.0 5.4 1.8 6.9 5.4 1.0 1 0 0 1 1 1 0 Haemagglutinin Viral_cys_rich PF08008.12 NODE_70710_length_223_cov_2.760638_g62769_i0reverse_frame_3 - 0.13 12.3 0.1 0.92 9.6 0.1 1.9 2 0 0 2 2 2 0 Viral cysteine rich Lipoprotein_18 PF06804.11 NODE_70709_length_223_cov_2.792553_g62768_i0reverse_frame_2 - 0.0001 21.5 0.0 0.00012 21.2 0.0 1.1 1 0 0 1 1 1 1 NlpB/DapX lipoprotein PLAC8 PF04749.17 NODE_70707_length_223_cov_2.877660_g62766_i0forward_frame_3 - 0.043 14.8 1.7 0.047 14.7 1.7 1.1 1 0 0 1 1 1 0 PLAC8 family FLILHELTA PF10306.9 NODE_70704_length_223_cov_3.074468_g62763_i0forward_frame_3 - 0.035 14.5 0.1 0.039 14.3 0.1 1.1 1 0 0 1 1 1 0 Hypothetical protein FLILHELTA zf-LITAF-like PF10601.9 NODE_70703_length_223_cov_3.079787_g62762_i0reverse_frame_2 - 0.36 11.1 5.4 0.46 10.8 5.4 1.3 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain DUF5642 PF18702.1 NODE_70703_length_223_cov_3.079787_g62762_i0forward_frame_2 - 0.042 13.6 0.1 0.046 13.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5642) TMEM154 PF15102.6 NODE_70702_length_223_cov_3.191489_g62761_i0forward_frame_3 - 0.034 14.1 2.1 0.041 13.8 2.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF5383 PF17355.2 NODE_70702_length_223_cov_3.191489_g62761_i0forward_frame_3 - 0.09 13.2 0.3 0.11 12.9 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Fer4_8 PF13183.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 1.1e-06 29.0 0.8 1.4e-06 28.6 0.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 6e-06 26.3 0.3 7.9e-06 25.9 0.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 2.8e-05 23.7 2.0 4e-05 23.2 2.0 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 2.9e-05 23.9 2.7 4.5e-05 23.3 2.7 1.3 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_7 PF12838.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.00021 21.8 0.2 0.00022 21.8 0.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.00027 21.2 2.2 0.00039 20.7 2.2 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_9 PF13187.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.00028 21.0 0.1 0.00032 20.8 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.00032 20.6 2.9 0.00047 20.1 2.9 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_17 PF13534.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.0018 18.8 1.8 0.0024 18.4 1.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.0061 17.5 0.1 0.0062 17.4 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.019 15.0 0.8 0.027 14.6 0.8 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.051 14.5 4.2 0.077 14.0 4.2 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_13 PF13370.6 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_3 - 0.094 13.3 3.8 0.15 12.6 3.9 1.3 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Tmemb_55A PF09788.9 NODE_70700_length_223_cov_3.420213_g62759_i0forward_frame_2 - 0.07 12.2 1.2 0.07 12.2 1.2 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A PAPS_reduct PF01507.19 NODE_70699_length_223_cov_3.601064_g62758_i0reverse_frame_2 - 2.7e-22 79.6 0.0 2.9e-22 79.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family LisH PF08513.11 NODE_70699_length_223_cov_3.601064_g62758_i0reverse_frame_2 - 0.024 14.6 0.3 0.046 13.7 0.3 1.5 1 0 0 1 1 1 0 LisH partial_CstF PF15861.5 NODE_70696_length_223_cov_3.962766_g62755_i0reverse_frame_2 - 0.28 11.0 0.2 0.37 10.6 0.2 1.2 1 0 0 1 1 1 0 Partial cleavage stimulation factor domain Thaumatin PF00314.17 NODE_70696_length_223_cov_3.962766_g62755_i0reverse_frame_2 - 4.7 6.8 5.9 7.7 6.1 5.9 1.6 1 1 0 1 1 1 0 Thaumatin family AGA2 PF17366.2 NODE_70694_length_223_cov_4.734043_g62753_i0reverse_frame_2 - 0.12 12.1 0.3 0.22 11.2 0.3 1.4 1 0 0 1 1 1 0 A-agglutinin-binding subunit Aga2 AMP-binding PF00501.28 NODE_70693_length_223_cov_4.845745_g62752_i0forward_frame_3 - 0.0026 16.4 0.0 0.0029 16.3 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme PDDEXK_5 PF11645.8 NODE_70690_length_223_cov_9.648936_g62749_i0forward_frame_3 - 0.055 13.4 0.2 0.07 13.1 0.2 1.2 1 0 0 1 1 1 0 PD-(D/E)XK endonuclease Fer4_10 PF13237.6 NODE_70686_length_223_cov_22.026596_g62745_i0forward_frame_3 - 0.036 14.2 1.8 0.057 13.5 1.8 1.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 NODE_70686_length_223_cov_22.026596_g62745_i0forward_frame_3 - 0.18 12.8 4.3 2.6 9.2 1.0 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain IL3 PF02059.15 NODE_70685_length_223_cov_26.058511_g62744_i0forward_frame_3 - 0.067 13.3 0.4 0.079 13.0 0.4 1.1 1 0 0 1 1 1 0 Interleukin-3 IL2 PF00715.17 NODE_70684_length_223_cov_30.414894_g62743_i0reverse_frame_3 - 0.05 13.5 0.7 0.055 13.4 0.7 1.1 1 0 0 1 1 1 0 Interleukin 2 APC_N_CC PF16689.5 NODE_70684_length_223_cov_30.414894_g62743_i0reverse_frame_3 - 0.3 11.2 3.2 0.63 10.1 3.2 1.5 1 1 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain GCR1_C PF12550.8 NODE_70683_length_223_cov_32.606383_g62742_i0forward_frame_3 - 0.32 11.3 8.0 0.4 11.0 8.0 1.2 1 0 0 1 1 1 0 Transcriptional activator of glycolytic enzymes DUF4304 PF14137.6 NODE_70681_length_223_cov_33.569149_g62740_i0reverse_frame_3 - 0.12 12.6 0.3 0.15 12.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4304) Snf7 PF03357.21 NODE_70675_length_223_cov_36.712766_g62734_i0reverse_frame_3 - 0.2 11.2 2.9 0.24 11.0 2.9 1.0 1 0 0 1 1 1 0 Snf7 DUF621 PF04789.15 NODE_70675_length_223_cov_36.712766_g62734_i0forward_frame_3 - 0.51 9.5 8.1 0.51 9.4 8.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF621) ASXH PF13919.6 NODE_70671_length_223_cov_42.223404_g62730_i0forward_frame_3 - 0.04 13.9 0.0 0.045 13.8 0.0 1.0 1 0 0 1 1 1 0 Asx homology domain Raptor_N PF14538.6 NODE_70670_length_223_cov_44.824468_g62729_i0reverse_frame_2 - 0.087 12.8 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Raptor N-terminal CASPase like domain CHAT PF12770.7 NODE_70670_length_223_cov_44.824468_g62729_i0reverse_frame_2 - 0.21 11.0 0.0 0.21 11.0 0.0 1.0 1 0 0 1 1 1 0 CHAT domain DUF4428 PF14471.6 NODE_70665_length_223_cov_49.191489_g62724_i0forward_frame_3 - 0.023 14.6 0.1 0.028 14.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) DUF4051 PF13260.6 NODE_70665_length_223_cov_49.191489_g62724_i0forward_frame_2 - 5 6.9 7.8 12 5.7 7.8 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) DUF2207 PF09972.9 NODE_70665_length_223_cov_49.191489_g62724_i0forward_frame_2 - 6.3 5.4 6.2 6 5.5 6.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FSH1 PF03959.13 NODE_70661_length_223_cov_51.765957_g62720_i0forward_frame_2 - 0.053 13.2 0.0 0.057 13.1 0.0 1.0 1 0 0 1 1 1 0 Serine hydrolase (FSH1) DUF4219 PF13961.6 NODE_70653_length_223_cov_61.590426_g62712_i0forward_frame_3 - 0.075 12.7 1.3 1.7 8.4 1.3 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4219) Transposase_28 PF04195.12 NODE_70652_length_223_cov_61.686170_g62711_i0reverse_frame_2 - 0.027 14.7 0.1 0.034 14.4 0.1 1.1 1 0 0 1 1 1 0 Putative gypsy type transposon DUF5463 PF17551.2 NODE_70650_length_223_cov_67.531915_g62709_i0reverse_frame_3 - 0.57 10.1 0.2 0.57 10.1 0.2 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5463) Transpos_assoc PF13963.6 NODE_70650_length_223_cov_67.531915_g62709_i0forward_frame_2 - 0.028 14.7 0.3 0.033 14.5 0.3 1.1 1 0 0 1 1 1 0 Transposase-associated domain DUF1856 PF08983.10 NODE_70645_length_223_cov_71.500000_g62704_i0forward_frame_3 - 0.072 13.3 0.5 0.11 12.7 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1856) TGT_C2 PF14810.6 NODE_70642_length_223_cov_87.404255_g62701_i0forward_frame_2 - 0.015 15.4 0.0 3.4 7.9 0.0 2.1 1 1 1 2 2 2 0 Patch-forming domain C2 of tRNA-guanine transglycosylase Peptidase_M60_C PF18630.1 NODE_70642_length_223_cov_87.404255_g62701_i0forward_frame_2 - 0.11 12.7 0.7 2.2 8.5 0.1 2.1 2 0 0 2 2 2 0 Peptidase M60 C-terminal domain PIG-H PF10181.9 NODE_70641_length_223_cov_90.356383_g62700_i0forward_frame_3 - 0.062 13.2 0.0 0.066 13.1 0.0 1.1 1 0 0 1 1 1 0 GPI-GlcNAc transferase complex, PIG-H component IGFBP PF00219.18 NODE_70637_length_223_cov_98.265957_g62696_i0forward_frame_3 - 1.2 9.8 12.5 1.8 9.2 12.5 1.3 1 0 0 1 1 1 0 Insulin-like growth factor binding protein SF3A3 PF16837.5 NODE_70636_length_223_cov_102.521277_g62695_i0reverse_frame_3 - 0.095 13.2 0.9 0.12 13.0 0.7 1.3 1 1 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 S_100 PF01023.19 NODE_70634_length_223_cov_106.303191_g62693_i0reverse_frame_2 - 0.16 11.7 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain DUF3446 PF11928.8 NODE_70633_length_223_cov_113.941489_g62692_i0forward_frame_3 - 0.0085 16.4 11.0 0.0086 16.4 11.0 1.2 1 0 0 1 1 1 1 Early growth response N-terminal domain DUF5480 PF17576.2 NODE_70633_length_223_cov_113.941489_g62692_i0forward_frame_2 - 0.75 9.8 4.2 0.21 11.6 1.5 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5480) DUF4769 PF15992.5 NODE_70631_length_223_cov_125.946809_g62690_i0reverse_frame_2 - 0.028 14.2 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) Ldr_toxin PF13940.6 NODE_70626_length_223_cov_167.106383_g62685_i0reverse_frame_3 - 0.031 14.3 0.1 0.04 14.0 0.1 1.2 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system Choline_kinase PF01633.20 NODE_70625_length_223_cov_167.686170_g62684_i0reverse_frame_3 - 0.12 12.0 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase C1_4 PF07975.12 NODE_70625_length_223_cov_167.686170_g62684_i0forward_frame_3 - 2.2 8.6 6.3 1.2 9.4 3.4 2.0 2 1 0 2 2 2 0 TFIIH C1-like domain DUF1072 PF06380.11 NODE_70623_length_223_cov_175.154255_g62682_i0forward_frame_3 - 0.023 14.6 0.2 0.21 11.5 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1072) Pneumo_ncap PF03246.13 NODE_70623_length_223_cov_175.154255_g62682_i0forward_frame_3 - 0.21 10.3 0.0 0.22 10.3 0.0 1.0 1 0 0 1 1 1 0 Pneumovirus nucleocapsid protein DUF4521 PF15021.6 NODE_70619_length_223_cov_371.547872_g62678_i0reverse_frame_2 - 0.017 15.1 0.1 0.018 15.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4521) DUF3334 PF11813.8 NODE_70612_length_224_cov_0.846561_g62671_i0reverse_frame_2 - 0.098 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3334) zf-C3HC4_3 PF13920.6 NODE_70612_length_224_cov_0.846561_g62671_i0forward_frame_2 - 0.2 11.6 4.8 1.5 8.7 4.8 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Fer4_21 PF14697.6 NODE_70611_length_224_cov_0.846561_g62670_i0forward_frame_3 - 0.049 13.8 0.9 0.055 13.6 0.9 1.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain NPDC1 PF06809.11 NODE_70608_length_224_cov_0.846561_g62667_i0reverse_frame_2 - 0.11 11.6 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Neural proliferation differentiation control-1 protein (NPDC1) YacG PF03884.14 NODE_70606_length_224_cov_0.904762_g62665_i0reverse_frame_3 - 0.026 14.2 1.2 0.039 13.7 1.2 1.3 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG Lamprin PF06403.11 NODE_70605_length_224_cov_0.920635_g62664_i0forward_frame_3 - 3.2 7.7 19.6 1.4 8.9 6.4 2.1 1 1 1 2 2 2 0 Lamprin DUF3331 PF11811.8 NODE_70603_length_224_cov_0.957672_g62662_i0reverse_frame_3 - 0.062 13.2 0.0 0.064 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) Las1 PF04031.13 NODE_70598_length_224_cov_1.031746_g62657_i0forward_frame_3 - 0.07 13.2 0.2 0.076 13.1 0.2 1.1 1 0 0 1 1 1 0 Las1-like MFS_1 PF07690.16 NODE_70597_length_224_cov_1.042328_g62656_i0reverse_frame_2 - 1.9e-07 30.4 0.4 2e-07 30.3 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PriA_C PF18074.1 NODE_70597_length_224_cov_1.042328_g62656_i0forward_frame_3 - 0.028 15.2 0.0 0.03 15.1 0.0 1.2 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain DUF2181 PF10223.9 NODE_70596_length_224_cov_1.042328_g62655_i0reverse_frame_3 - 0.0089 15.5 0.1 0.0099 15.4 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2181) Toxin_22 PF08092.11 NODE_70596_length_224_cov_1.042328_g62655_i0forward_frame_3 - 0.021 14.8 1.0 0.021 14.8 1.0 2.2 2 0 0 2 2 2 0 Magi peptide toxin family Med2 PF11214.8 NODE_70595_length_224_cov_1.052910_g62654_i0forward_frame_2 - 0.031 14.4 0.0 0.039 14.1 0.0 1.1 1 0 0 1 1 1 0 Mediator complex subunit 2 7TMR-DISM_7TM PF07695.11 NODE_70591_length_224_cov_1.058201_g62650_i0forward_frame_3 - 0.021 14.7 0.6 0.024 14.5 0.6 1.0 1 0 0 1 1 1 0 7TM diverse intracellular signalling HEPN_AbiU2 PF18734.1 NODE_70591_length_224_cov_1.058201_g62650_i0forward_frame_3 - 0.073 12.6 0.1 0.11 12.0 0.1 1.3 1 1 0 1 1 1 0 AbiU2 DUF5488 PF17590.2 NODE_70590_length_224_cov_1.058201_g62649_i0forward_frame_2 - 0.12 12.2 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5488) Adeno_IVa2 PF02456.15 NODE_70588_length_224_cov_1.100529_g62647_i0forward_frame_3 - 0.014 14.2 0.1 0.017 13.9 0.1 1.0 1 0 0 1 1 1 0 Adenovirus IVa2 protein DUF5524 PF17662.1 NODE_70588_length_224_cov_1.100529_g62647_i0forward_frame_3 - 0.2 11.0 0.0 0.25 10.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5524) DASH_Spc19 PF08287.11 NODE_70585_length_224_cov_1.111111_g62644_i0reverse_frame_3 - 0.026 14.4 0.1 0.034 14.1 0.1 1.1 1 0 0 1 1 1 0 Spc19 DUF1156 PF06634.12 NODE_70585_length_224_cov_1.111111_g62644_i0forward_frame_2 - 0.16 12.1 2.7 0.19 11.8 2.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1156) Herpes_glycop PF01528.16 NODE_70583_length_224_cov_1.116402_g62642_i0reverse_frame_3 - 0.023 13.6 1.1 0.024 13.5 1.1 1.0 1 0 0 1 1 1 0 Herpesvirus glycoprotein M TMEM247 PF15444.6 NODE_70582_length_224_cov_1.121693_g62641_i0reverse_frame_2 - 2.2 8.3 5.4 2.8 7.9 5.4 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 TOPRIM_C PF16898.5 NODE_70582_length_224_cov_1.121693_g62641_i0forward_frame_3 - 0.03 14.6 0.2 0.036 14.4 0.2 1.0 1 0 0 1 1 1 0 C-terminal associated domain of TOPRIM Sec34 PF04136.15 NODE_70577_length_224_cov_1.222222_g62636_i0forward_frame_2 - 0.0066 16.3 0.7 0.0068 16.3 0.7 1.2 1 0 0 1 1 1 1 Sec34-like family RIX1 PF08167.12 NODE_70577_length_224_cov_1.222222_g62636_i0forward_frame_2 - 0.013 15.2 0.3 0.015 15.0 0.3 1.0 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis Hist_deacetyl PF00850.19 NODE_70574_length_224_cov_1.259259_g62633_i0reverse_frame_2 - 3.2e-18 66.3 0.0 3.4e-18 66.2 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain PEPCK_GTP PF00821.18 NODE_70573_length_224_cov_1.259259_g62632_i0reverse_frame_3 - 0.092 11.6 0.0 0.093 11.5 0.0 1.0 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain GUN4 PF05419.12 NODE_70573_length_224_cov_1.259259_g62632_i0reverse_frame_2 - 0.025 14.7 0.0 0.043 13.9 0.0 1.3 1 1 0 1 1 1 0 GUN4-like LETM1 PF07766.13 NODE_70573_length_224_cov_1.259259_g62632_i0reverse_frame_2 - 0.15 11.4 0.7 0.58 9.5 0.6 1.8 1 1 1 2 2 2 0 LETM1-like protein Spin-Ssty PF02513.17 NODE_70570_length_224_cov_1.259259_g62629_i0forward_frame_3 - 0.15 11.8 0.0 8.8 6.1 0.0 2.1 2 0 0 2 2 2 0 Spin/Ssty Family Phage_spike_2 PF18781.1 NODE_70570_length_224_cov_1.259259_g62629_i0forward_frame_3 - 0.16 12.0 0.0 8.3 6.5 0.0 2.0 2 0 0 2 2 2 0 Phage spike trimer DMA PF03474.14 NODE_70568_length_224_cov_1.259259_g62627_i0reverse_frame_2 - 0.15 11.7 0.4 0.37 10.4 0.4 1.6 1 0 0 1 1 1 0 DMRTA motif Croc_4 PF17691.1 NODE_70567_length_224_cov_1.264550_g62626_i0reverse_frame_3 - 0.029 14.4 3.4 0.13 12.4 0.2 2.0 1 1 1 2 2 2 0 Contingent replication of cDNA 4 Pkinase PF00069.25 NODE_70556_length_224_cov_1.275132_g62615_i0reverse_frame_3 - 8.1e-07 28.7 0.0 1.1e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain UPF0054 PF02130.17 NODE_70552_length_224_cov_1.343915_g62611_i0forward_frame_2 - 0.068 13.0 0.0 0.094 12.5 0.0 1.3 1 1 0 1 1 1 0 Uncharacterized protein family UPF0054 Polo_box_3 PF18544.1 NODE_70551_length_224_cov_1.365079_g62610_i0forward_frame_3 - 6.4e-05 23.5 0.1 7.4e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 Polo box domain POLO_box PF00659.18 NODE_70551_length_224_cov_1.365079_g62610_i0forward_frame_3 - 0.11 12.7 1.8 1.9 8.7 0.2 2.4 1 1 2 3 3 3 0 POLO box duplicated region Ac110_PIF PF07280.11 NODE_70549_length_224_cov_1.370370_g62608_i0forward_frame_3 - 0.037 13.8 0.0 0.059 13.2 0.0 1.3 1 0 0 1 1 1 0 Per os infectivity factor AC110 DUF1619 PF07773.11 NODE_70547_length_224_cov_1.375661_g62606_i0reverse_frame_3 - 0.63 9.9 4.5 0.73 9.7 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1619) Calici_coat PF00915.20 NODE_70547_length_224_cov_1.375661_g62606_i0forward_frame_3 - 0.065 12.1 0.0 0.065 12.1 0.0 1.0 1 0 0 1 1 1 0 Calicivirus coat protein PapG_C PF03628.13 NODE_70546_length_224_cov_1.386243_g62605_i0reverse_frame_2 - 0.013 15.4 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 PapG chaperone-binding domain DER1 PF04511.15 NODE_70544_length_224_cov_1.391534_g62603_i0reverse_frame_3 - 1.9e-13 50.8 1.4 2e-13 50.7 1.4 1.0 1 0 0 1 1 1 1 Der1-like family Rhomboid PF01694.22 NODE_70544_length_224_cov_1.391534_g62603_i0reverse_frame_3 - 0.006 16.6 0.2 0.0096 15.9 0.2 1.3 1 0 0 1 1 1 1 Rhomboid family DUF3767 PF12597.8 NODE_70544_length_224_cov_1.391534_g62603_i0forward_frame_3 - 0.13 12.1 0.2 0.15 11.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) Pox_E6 PF04656.12 NODE_70543_length_224_cov_1.407407_g62602_i0forward_frame_3 - 0.25 9.7 0.0 0.28 9.6 0.0 1.0 1 0 0 1 1 1 0 Pox virus E6 protein Secretogranin_V PF05281.11 NODE_70543_length_224_cov_1.407407_g62602_i0forward_frame_2 - 0.16 11.6 0.1 0.16 11.5 0.1 1.1 1 0 0 1 1 1 0 Neuroendocrine protein 7B2 precursor (Secretogranin V) rve PF00665.26 NODE_70542_length_224_cov_1.407407_g62601_i0reverse_frame_2 - 0.0014 18.8 0.1 0.002 18.3 0.1 1.3 1 1 0 1 1 1 1 Integrase core domain RHH_6 PF16762.5 NODE_70542_length_224_cov_1.407407_g62601_i0reverse_frame_2 - 0.054 14.1 0.0 0.068 13.8 0.0 1.2 1 0 0 1 1 1 0 Ribbon-helix-helix domain AAA_lid_3 PF17862.1 NODE_70539_length_224_cov_1.444444_g62598_i0reverse_frame_2 - 0.0047 16.7 0.5 0.03 14.1 0.0 2.0 2 0 0 2 2 2 1 AAA+ lid domain GATase_5 PF13507.6 NODE_70538_length_224_cov_1.460317_g62597_i0reverse_frame_2 - 0.066 12.3 0.3 0.069 12.2 0.3 1.1 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DUF1043 PF06295.12 NODE_70537_length_224_cov_1.460317_g62596_i0reverse_frame_3 - 0.083 12.9 0.8 0.098 12.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) DUF5408 PF17402.2 NODE_70537_length_224_cov_1.460317_g62596_i0forward_frame_3 - 0.021 14.7 1.5 0.023 14.6 1.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5408) Castor1_N PF18700.1 NODE_70530_length_224_cov_1.550265_g62589_i0forward_frame_3 - 0.045 13.6 0.0 0.063 13.1 0.0 1.2 1 0 0 1 1 1 0 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Ndc1_Nup PF09531.10 NODE_70528_length_224_cov_1.555556_g62587_i0forward_frame_2 - 4 6.0 10.1 4 6.0 10.1 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup InPase PF18823.1 NODE_70523_length_224_cov_1.592593_g62582_i0forward_frame_3 - 0.0015 18.3 0.3 0.0016 18.2 0.3 1.1 1 0 0 1 1 1 1 Inorganic Pyrophosphatase Tmemb_18A PF09771.9 NODE_70522_length_224_cov_1.608466_g62581_i0reverse_frame_2 - 0.18 12.2 5.3 0.21 12.0 5.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 188 Nod1 PF17114.5 NODE_70522_length_224_cov_1.608466_g62581_i0forward_frame_2 - 0.031 14.4 0.3 0.037 14.2 0.3 1.1 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 Glyco_hydro_62 PF03664.13 NODE_70521_length_224_cov_1.608466_g62580_i0reverse_frame_2 - 0.0015 17.9 0.0 0.0017 17.7 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 62 ECR1_N PF14382.6 NODE_70517_length_224_cov_1.650794_g62576_i0reverse_frame_2 - 0.013 15.3 0.1 0.043 13.6 0.1 1.8 1 1 1 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region DUF2630 PF10944.8 NODE_70511_length_224_cov_1.682540_g62570_i0reverse_frame_2 - 2.3 8.7 12.7 0.53 10.8 1.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2630) MFS_1 PF07690.16 NODE_70509_length_224_cov_1.693122_g62568_i0reverse_frame_3 - 0.00021 20.4 0.6 0.00022 20.3 0.6 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3270 PF11674.8 NODE_70509_length_224_cov_1.693122_g62568_i0reverse_frame_3 - 0.21 11.8 1.1 1.1 9.5 0.9 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) COX5B PF01215.19 NODE_70508_length_224_cov_1.724868_g62567_i0forward_frame_3 - 0.012 15.3 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb CHDNT PF08073.12 NODE_70507_length_224_cov_1.735450_g62566_i0forward_frame_3 - 0.0091 15.9 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 CHDNT (NUC034) domain FtsJ PF01728.19 NODE_70505_length_224_cov_1.783069_g62564_i0reverse_frame_3 - 0.021 14.9 0.0 0.022 14.9 0.0 1.0 1 0 0 1 1 1 0 FtsJ-like methyltransferase Helicase_C_2 PF13307.6 NODE_70501_length_224_cov_1.820106_g62560_i0reverse_frame_2 - 6.6e-21 75.2 0.3 6.8e-21 75.2 0.3 1.0 1 0 0 1 1 1 1 Helicase C-terminal domain MutL PF13941.6 NODE_70501_length_224_cov_1.820106_g62560_i0reverse_frame_2 - 0.043 12.4 0.0 0.05 12.2 0.0 1.0 1 0 0 1 1 1 0 MutL protein THB PF18362.1 NODE_70500_length_224_cov_1.825397_g62559_i0forward_frame_2 - 0.13 11.9 0.1 0.18 11.4 0.1 1.3 1 0 0 1 1 1 0 Tri-helix bundle domain FAM27 PF15832.5 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 0.0064 17.0 3.2 0.008 16.7 3.2 1.2 1 0 0 1 1 1 1 FAM27 D and E protein family DUF3915 PF13054.6 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 0.045 13.7 7.6 0.059 13.3 7.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Auts2 PF15336.6 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 0.099 12.8 6.2 0.12 12.4 6.2 1.1 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Atrophin-1 PF03154.15 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 0.27 9.5 13.5 0.33 9.2 13.5 1.1 1 0 0 1 1 1 0 Atrophin-1 family Phage_Gp23 PF10669.9 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_3 - 1.3 9.3 6.2 1.5 9.2 6.2 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) DUF3915 PF13054.6 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_2 - 0.0054 16.7 4.5 0.0073 16.3 4.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_2 - 0.48 8.6 12.1 0.6 8.3 12.1 1.1 1 0 0 1 1 1 0 Atrophin-1 family FAM27 PF15832.5 NODE_70498_length_224_cov_1.894180_g62557_i0forward_frame_2 - 2.4 8.8 13.0 13 6.4 13.0 1.9 1 1 0 1 1 1 0 FAM27 D and E protein family VitD-bind_III PF09164.10 NODE_70493_length_224_cov_1.941799_g62552_i0reverse_frame_3 - 0.021 14.8 0.7 0.035 14.1 0.7 1.4 1 0 0 1 1 1 0 Vitamin D binding protein, domain III CopC PF04234.12 NODE_70490_length_224_cov_1.978836_g62549_i0reverse_frame_2 - 3.2e-12 47.3 0.2 3.9e-12 47.0 0.2 1.1 1 0 0 1 1 1 1 CopC domain FlgD_ig PF13860.6 NODE_70490_length_224_cov_1.978836_g62549_i0reverse_frame_2 - 0.12 12.2 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 FlgD Ig-like domain SKG6 PF08693.10 NODE_70489_length_224_cov_2.000000_g62548_i0forward_frame_3 - 0.93 9.0 8.8 0.099 12.1 2.5 2.1 2 0 0 2 2 2 0 Transmembrane alpha-helix domain DUF4223 PF13978.6 NODE_70488_length_224_cov_2.010582_g62547_i0reverse_frame_3 - 0.062 13.3 0.1 0.093 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4223) Kazal_2 PF07648.15 NODE_70486_length_224_cov_2.037037_g62545_i0forward_frame_2 - 0.0072 16.4 1.0 0.011 15.8 1.0 1.4 1 0 0 1 1 1 1 Kazal-type serine protease inhibitor domain Gal_GalNac_35kD PF17337.2 NODE_70484_length_224_cov_2.063492_g62543_i0forward_frame_2 - 0.017 15.2 0.2 0.019 15.0 0.2 1.1 1 0 0 1 1 1 0 Galactose-inhibitable lectin 35 kDa subunit SBP_bac_5 PF00496.22 NODE_70483_length_224_cov_2.063492_g62542_i0forward_frame_2 - 9.9e-13 47.8 0.1 1.2e-12 47.5 0.1 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Tme5_EGF_like PF09064.10 NODE_70481_length_224_cov_2.137566_g62540_i0forward_frame_2 - 0.061 13.2 0.6 0.09 12.7 0.6 1.2 1 0 0 1 1 1 0 Thrombomodulin like fifth domain, EGF-like Fib_alpha PF08702.10 NODE_70480_length_224_cov_2.164021_g62539_i0reverse_frame_3 - 0.018 15.3 5.4 0.026 14.7 5.4 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Sec8_exocyst PF04048.14 NODE_70480_length_224_cov_2.164021_g62539_i0reverse_frame_3 - 0.037 13.9 1.3 0.047 13.6 1.3 1.1 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain TMPIT PF07851.13 NODE_70480_length_224_cov_2.164021_g62539_i0reverse_frame_3 - 0.064 12.5 1.7 0.068 12.4 1.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein Cytochrom_B558a PF05038.13 NODE_70480_length_224_cov_2.164021_g62539_i0reverse_frame_3 - 0.15 11.6 0.1 0.18 11.4 0.1 1.1 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit DUF2370 PF10176.9 NODE_70480_length_224_cov_2.164021_g62539_i0forward_frame_2 - 1.7 8.2 3.3 1.9 8.1 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) DUF1270 PF06900.11 NODE_70476_length_224_cov_2.248677_g62535_i0reverse_frame_2 - 0.019 15.3 0.3 0.025 14.9 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1270) DUF4400 PF14348.6 NODE_70475_length_224_cov_2.264550_g62534_i0forward_frame_2 - 1.5 8.3 4.4 1.7 8.1 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) cNMP_binding PF00027.29 NODE_70472_length_224_cov_2.306878_g62531_i0forward_frame_3 - 4.7e-13 49.0 0.0 5.4e-13 48.8 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Lamprin PF06403.11 NODE_70471_length_224_cov_2.317460_g62530_i0forward_frame_3 - 0.16 11.9 2.7 0.16 11.9 2.7 1.1 1 0 0 1 1 1 0 Lamprin Hirudin PF00713.17 NODE_70470_length_224_cov_2.322751_g62529_i0forward_frame_2 - 0.032 14.6 0.3 0.046 14.0 0.3 1.3 1 0 0 1 1 1 0 Hirudin TraG_N PF07916.11 NODE_70466_length_224_cov_2.370370_g62525_i0reverse_frame_3 - 0.0076 15.1 7.4 0.009 14.9 7.4 1.0 1 0 0 1 1 1 1 TraG-like protein, N-terminal region GerPB PF10803.8 NODE_70466_length_224_cov_2.370370_g62525_i0forward_frame_3 - 0.092 12.9 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Spore germination GerPB FH2 PF02181.23 NODE_70466_length_224_cov_2.370370_g62525_i0forward_frame_2 - 0.0006 19.0 2.5 0.00062 19.0 2.5 1.0 1 0 0 1 1 1 1 Formin Homology 2 Domain MRP-L51 PF10244.9 NODE_70466_length_224_cov_2.370370_g62525_i0forward_frame_2 - 0.059 13.6 0.9 0.077 13.2 0.9 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit PRTP PF01366.18 NODE_70464_length_224_cov_2.375661_g62523_i0reverse_frame_3 - 0.019 13.1 0.2 0.021 12.9 0.2 1.0 1 0 0 1 1 1 0 Herpesvirus processing and transport protein STAT_int PF02865.17 NODE_70464_length_224_cov_2.375661_g62523_i0reverse_frame_3 - 0.032 14.7 0.0 0.039 14.4 0.0 1.1 1 0 0 1 1 1 0 STAT protein, protein interaction domain HS1_rep PF02218.15 NODE_70463_length_224_cov_2.386243_g62522_i0forward_frame_2 - 0.14 12.5 1.1 0.8 10.1 2.1 1.8 2 1 0 2 2 2 0 Repeat in HS1/Cortactin LpoB PF13036.6 NODE_70461_length_224_cov_2.444444_g62520_i0reverse_frame_2 - 0.11 12.4 0.3 0.13 12.2 0.3 1.0 1 0 0 1 1 1 0 Peptidoglycan-synthase activator LpoB ComS PF17584.2 NODE_70455_length_224_cov_2.576720_g62514_i0forward_frame_3 - 0.1 12.2 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacillus competence protein S DUF2079 PF09852.9 NODE_70454_length_224_cov_2.597884_g62513_i0forward_frame_3 - 0.029 13.3 1.6 0.033 13.1 1.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) NdhS PF11623.8 NODE_70451_length_224_cov_2.740741_g62510_i0reverse_frame_2 - 0.032 13.9 0.0 0.04 13.6 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S DUF5090 PF17009.5 NODE_70450_length_224_cov_2.740741_g62509_i0reverse_frame_3 - 1.4 8.8 5.9 1.4 8.8 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Receptor_2B4 PF11465.8 NODE_70449_length_224_cov_2.746032_g62508_i0reverse_frame_2 - 0.013 15.7 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 PhaG_MnhG_YufB PF03334.14 NODE_70446_length_224_cov_2.830688_g62505_i0reverse_frame_2 - 0.048 13.9 0.2 0.15 12.3 0.0 1.8 1 1 0 1 1 1 0 Na+/H+ antiporter subunit EF-hand_7 PF13499.6 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.00043 20.7 0.1 0.00063 20.1 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.00048 19.8 0.0 0.00068 19.4 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.0048 16.4 0.1 0.0074 15.8 0.1 1.3 1 0 0 1 1 1 1 EF hand EF-hand_11 PF08976.11 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.0072 17.2 0.1 0.0091 16.9 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain IF2_N PF04760.15 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.02 14.7 0.1 0.028 14.2 0.1 1.3 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region DUF3890 PF13029.6 NODE_70446_length_224_cov_2.830688_g62505_i0forward_frame_2 - 0.028 14.9 0.0 0.03 14.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3890) PRP38_assoc PF12871.7 NODE_70445_length_224_cov_2.830688_g62504_i0reverse_frame_3 - 6.4 7.5 43.1 2.2e+02 2.5 42.1 2.0 1 1 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term DUF3304 PF11745.8 NODE_70445_length_224_cov_2.830688_g62504_i0reverse_frame_2 - 0.0097 16.3 3.4 0.012 16.0 2.7 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF3304) DUF3915 PF13054.6 NODE_70445_length_224_cov_2.830688_g62504_i0reverse_frame_2 - 1.4 8.9 36.2 0.28 11.2 9.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3915) Orthopox_A5L PF06193.11 NODE_70444_length_224_cov_2.888889_g62503_i0forward_frame_3 - 0.61 9.5 3.5 0.63 9.4 3.5 1.1 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like DUF2249 PF10006.9 NODE_70443_length_224_cov_2.941799_g62502_i0reverse_frame_3 - 0.071 13.0 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) Luteo_coat PF00894.18 NODE_70443_length_224_cov_2.941799_g62502_i0reverse_frame_2 - 0.026 14.4 0.2 0.027 14.3 0.2 1.1 1 0 0 1 1 1 0 Luteovirus coat protein Not1 PF04054.15 NODE_70443_length_224_cov_2.941799_g62502_i0reverse_frame_2 - 0.096 11.6 0.1 0.1 11.5 0.1 1.0 1 0 0 1 1 1 0 CCR4-Not complex component, Not1 ToxB_N PF18224.1 NODE_70442_length_224_cov_2.989418_g62501_i0forward_frame_3 - 0.011 15.6 0.1 0.015 15.2 0.1 1.2 1 0 0 1 1 1 0 ToxB N-terminal domain DUF1730 PF08331.10 NODE_70442_length_224_cov_2.989418_g62501_i0forward_frame_3 - 0.082 12.8 0.0 0.094 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1730) HHH PF00633.23 NODE_70440_length_224_cov_3.031746_g62499_i0reverse_frame_3 - 1.4e-07 31.0 0.0 2.3e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 NODE_70440_length_224_cov_3.031746_g62499_i0reverse_frame_3 - 0.00036 21.1 0.0 0.00051 20.6 0.0 1.2 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 NODE_70440_length_224_cov_3.031746_g62499_i0reverse_frame_3 - 0.0027 17.8 0.0 0.0038 17.3 0.0 1.2 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 NODE_70440_length_224_cov_3.031746_g62499_i0reverse_frame_3 - 0.0052 17.0 0.0 0.0074 16.5 0.0 1.2 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF3272 PF11676.8 NODE_70440_length_224_cov_3.031746_g62499_i0forward_frame_3 - 0.033 14.4 0.0 0.043 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3272) DUF4918 PF16265.5 NODE_70437_length_224_cov_3.174603_g62496_i0forward_frame_3 - 0.15 11.6 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4918) m_DGTX_Dc1a_b_c PF17491.2 NODE_70436_length_224_cov_3.211640_g62495_i0reverse_frame_2 - 0.25 12.0 8.8 0.38 11.4 8.8 1.5 1 1 0 1 1 1 0 Spider Toxins mu-diguetoxin-1 a, b and c DUF5090 PF17009.5 NODE_70435_length_224_cov_3.232804_g62494_i0forward_frame_2 - 0.22 11.5 7.3 0.25 11.3 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) ZFYVE21_C PF16696.5 NODE_70432_length_224_cov_3.576720_g62491_i0reverse_frame_2 - 0.031 14.2 0.4 0.032 14.1 0.4 1.2 1 0 0 1 1 1 0 Zinc finger FYVE domain-containing protein 21 C-terminus TORC_C PF12886.7 NODE_70427_length_224_cov_4.931217_g62486_i0reverse_frame_2 - 0.011 16.2 0.0 0.022 15.3 0.0 1.4 1 0 0 1 1 1 0 Transducer of regulated CREB activity, C terminus DUF2087 PF09860.9 NODE_70426_length_224_cov_5.619048_g62485_i0reverse_frame_3 - 0.053 13.7 0.2 0.084 13.0 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) Waikav_capsid_1 PF12264.8 NODE_70422_length_224_cov_26.074074_g62481_i0reverse_frame_2 - 0.0096 15.4 0.9 0.011 15.3 0.9 1.0 1 0 0 1 1 1 1 Waikavirus capsid protein 1 DUF333 PF03891.15 NODE_70421_length_224_cov_27.391534_g62480_i0reverse_frame_3 - 0.053 13.8 0.1 0.14 12.4 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF333) Acyl-CoA_dh_N PF02771.16 NODE_70421_length_224_cov_27.391534_g62480_i0reverse_frame_2 - 0.042 14.5 0.0 0.052 14.2 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, N-terminal domain Flavodoxin_3 PF12641.7 NODE_70421_length_224_cov_27.391534_g62480_i0forward_frame_3 - 0.14 11.8 0.0 0.15 11.8 0.0 1.0 1 0 0 1 1 1 0 Flavodoxin domain A_deaminase PF00962.22 NODE_70419_length_224_cov_32.338624_g62478_i0forward_frame_3 - 0.036 13.4 0.1 0.036 13.4 0.1 1.0 1 0 0 1 1 1 0 Adenosine/AMP deaminase Actin PF00022.19 NODE_70417_length_224_cov_35.301587_g62476_i0reverse_frame_2 - 5.3e-14 51.6 0.1 6.4e-14 51.4 0.1 1.1 1 0 0 1 1 1 1 Actin Peptidase_C11 PF03415.14 NODE_70409_length_224_cov_41.026455_g62468_i0reverse_frame_2 - 0.044 13.2 0.0 0.045 13.1 0.0 1.0 1 0 0 1 1 1 0 Clostripain family AAA_17 PF13207.6 NODE_70409_length_224_cov_41.026455_g62468_i0reverse_frame_2 - 0.064 13.7 0.1 0.071 13.5 0.1 1.0 1 0 0 1 1 1 0 AAA domain PqqA PF08042.11 NODE_70407_length_224_cov_42.026455_g62466_i0reverse_frame_3 - 0.056 13.5 0.5 0.14 12.2 0.1 1.8 2 0 0 2 2 2 0 PqqA family Pkinase PF00069.25 NODE_70406_length_224_cov_43.052910_g62465_i0reverse_frame_3 - 3e-06 26.8 0.0 3.3e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 NODE_70406_length_224_cov_43.052910_g62465_i0reverse_frame_3 - 0.0082 15.8 0.0 0.0091 15.6 0.0 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 DUF4868 PF16162.5 NODE_70406_length_224_cov_43.052910_g62465_i0reverse_frame_3 - 0.021 14.7 0.5 0.03 14.2 0.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4868) C_Hendra PF16821.5 NODE_70401_length_224_cov_46.513228_g62460_i0reverse_frame_3 - 0.18 11.7 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 C protein from hendra and measles viruses Phage_holin_Dp1 PF16938.5 NODE_70399_length_224_cov_47.232804_g62458_i0forward_frame_2 - 0.018 15.2 0.0 0.023 14.9 0.0 1.1 1 0 0 1 1 1 0 Putative phage holin Dp-1 YfhO PF09586.10 NODE_70398_length_224_cov_48.513228_g62457_i0reverse_frame_2 - 5.4 5.1 9.3 5.9 5.0 9.3 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Phospholamban PF04272.14 NODE_70396_length_224_cov_50.751323_g62455_i0reverse_frame_2 - 0.0028 17.1 3.8 0.0028 17.1 3.8 1.6 2 0 0 2 2 2 1 Phospholamban Spike_NTD PF16451.5 NODE_70396_length_224_cov_50.751323_g62455_i0reverse_frame_2 - 0.023 14.0 0.3 0.024 14.0 0.3 1.0 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain DUF4349 PF14257.6 NODE_70396_length_224_cov_50.751323_g62455_i0reverse_frame_2 - 0.061 12.8 0.0 0.074 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Vpu PF00558.19 NODE_70396_length_224_cov_50.751323_g62455_i0reverse_frame_2 - 7.4 6.4 6.6 3.7 7.4 4.1 1.7 1 1 1 2 2 2 0 Vpu protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks364.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks364.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks364.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks364.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:36:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4995 PF16386.5 NODE_70390_length_224_cov_57.804233_g62449_i0reverse_frame_2 - 0.081 12.9 0.2 0.14 12.1 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function YjcZ PF13990.6 NODE_70388_length_224_cov_59.417989_g62447_i0reverse_frame_2 - 0.016 14.6 0.1 0.018 14.4 0.1 1.0 1 0 0 1 1 1 0 YjcZ-like protein DUF1330 PF07045.11 NODE_70388_length_224_cov_59.417989_g62447_i0forward_frame_3 - 0.12 12.7 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1330) AGT PF11440.8 NODE_70386_length_224_cov_61.809524_g62445_i0forward_frame_2 - 0.043 12.9 0.0 0.044 12.8 0.0 1.1 1 0 0 1 1 1 0 DNA alpha-glucosyltransferase DUF4716 PF15837.5 NODE_70379_length_224_cov_73.238095_g62438_i0reverse_frame_2 - 0.98 9.5 5.9 14 5.9 1.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) TAN PF11640.8 NODE_70376_length_224_cov_78.820106_g62435_i0forward_frame_2 - 0.058 13.5 0.3 0.062 13.4 0.3 1.1 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair DUF3305 PF11749.8 NODE_70375_length_224_cov_79.148148_g62434_i0reverse_frame_3 - 0.018 15.1 0.1 0.02 15.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3305) T6SS_Vgr PF13296.6 NODE_70375_length_224_cov_79.148148_g62434_i0reverse_frame_3 - 0.11 12.6 0.0 0.15 12.2 0.0 1.3 1 1 0 1 1 1 0 Putative type VI secretion system Rhs element Vgr Dicistro_VP4 PF11492.8 NODE_70375_length_224_cov_79.148148_g62434_i0reverse_frame_3 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Cricket paralysis virus, VP4 YqzE PF14038.6 NODE_70375_length_224_cov_79.148148_g62434_i0reverse_frame_3 - 0.95 9.5 7.5 2.4 8.2 1.4 2.1 2 0 0 2 2 2 0 YqzE-like protein DUF4201 PF13870.6 NODE_70374_length_224_cov_80.433862_g62433_i0reverse_frame_3 - 0.00031 20.5 0.6 0.00044 20.0 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) Imm74 PF15603.6 NODE_70374_length_224_cov_80.433862_g62433_i0reverse_frame_3 - 0.062 13.5 0.2 0.075 13.2 0.2 1.1 1 0 0 1 1 1 0 Immunity protein 74 Frag1 PF10277.9 NODE_70371_length_224_cov_101.052910_g62430_i0forward_frame_3 - 4.5 6.8 10.5 23 4.4 10.5 1.8 1 1 0 1 1 1 0 Frag1/DRAM/Sfk1 family PAP2 PF01569.21 NODE_70365_length_224_cov_149.624339_g62424_i0reverse_frame_3 - 0.16 11.7 3.1 0.18 11.6 3.1 1.2 1 0 0 1 1 1 0 PAP2 superfamily Questin_oxidase PF14027.6 NODE_70365_length_224_cov_149.624339_g62424_i0reverse_frame_3 - 0.27 10.7 0.8 0.27 10.8 0.8 1.0 1 0 0 1 1 1 0 Questin oxidase-like PEGA PF08308.11 NODE_70364_length_224_cov_154.862434_g62423_i0reverse_frame_3 - 0.02 14.8 0.0 0.029 14.2 0.0 1.2 1 0 0 1 1 1 0 PEGA domain Ntox46 PF15538.6 NODE_70364_length_224_cov_154.862434_g62423_i0reverse_frame_2 - 0.1 12.6 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 46 PHD PF00628.29 NODE_70364_length_224_cov_154.862434_g62423_i0forward_frame_3 - 0.0005 19.9 1.3 0.0005 19.9 1.3 1.8 2 1 0 2 2 2 1 PHD-finger PHD_2 PF13831.6 NODE_70364_length_224_cov_154.862434_g62423_i0forward_frame_3 - 0.0035 16.9 1.4 0.0035 16.9 1.4 2.0 2 1 0 2 2 2 1 PHD-finger CENP-F_C_Rb_bdg PF10490.9 NODE_70362_length_224_cov_160.698413_g62421_i0reverse_frame_3 - 0.11 11.9 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 Toxin_3 PF00537.18 NODE_70362_length_224_cov_160.698413_g62421_i0forward_frame_2 - 0.025 14.8 0.0 0.035 14.3 0.0 1.3 1 0 0 1 1 1 0 Scorpion toxin-like domain DUF1168 PF06658.12 NODE_70355_length_224_cov_215.597884_g62414_i0reverse_frame_2 - 0.025 14.4 17.2 0.035 13.9 17.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) TipAS PF07739.13 NODE_70355_length_224_cov_215.597884_g62414_i0reverse_frame_2 - 0.16 12.6 6.1 0.19 12.3 6.1 1.2 1 0 0 1 1 1 0 TipAS antibiotic-recognition domain PBECR1 PF18809.1 NODE_70355_length_224_cov_215.597884_g62414_i0reverse_frame_2 - 0.21 12.3 6.4 0.24 12.1 6.4 1.2 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1 Spt5_N PF11942.8 NODE_70355_length_224_cov_215.597884_g62414_i0reverse_frame_2 - 0.86 10.6 7.8 1.1 10.3 7.8 1.2 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal Ndc1_Nup PF09531.10 NODE_70355_length_224_cov_215.597884_g62414_i0forward_frame_2 - 1.8 7.2 8.6 2 7.0 8.6 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup LacY_symp PF01306.19 NODE_70354_length_224_cov_225.460317_g62413_i0reverse_frame_3 - 0.067 12.0 4.6 0.066 12.0 4.6 1.1 1 0 0 1 1 1 0 LacY proton/sugar symporter CagS PF16707.5 NODE_70351_length_224_cov_275.322751_g62410_i0reverse_frame_3 - 0.039 14.0 0.1 0.044 13.8 0.1 1.0 1 0 0 1 1 1 0 Cag pathogenicity island protein S of Helicobacter pylori Histone_H2A_C PF16211.5 NODE_70351_length_224_cov_275.322751_g62410_i0reverse_frame_2 - 0.077 12.7 3.5 0.11 12.2 3.5 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A DZR PF12773.7 NODE_70348_length_224_cov_406.375661_g62407_i0reverse_frame_3 - 0.05 13.6 3.6 0.11 12.6 3.6 1.7 1 1 0 1 1 1 0 Double zinc ribbon UNC119_bdg PF15435.6 NODE_70347_length_224_cov_418.047619_g62406_i0forward_frame_2 - 0.072 12.6 0.2 0.082 12.5 0.2 1.0 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue Peptidase_S8 PF00082.22 NODE_70346_length_224_cov_426.174603_g62405_i0forward_frame_2 - 0.078 12.2 0.0 0.086 12.1 0.0 1.0 1 0 0 1 1 1 0 Subtilase family ScdA_N PF04405.14 NODE_70345_length_224_cov_532.137566_g62404_i0reverse_frame_3 - 0.029 14.0 0.0 0.045 13.4 0.0 1.4 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) Paf1 PF03985.13 NODE_70345_length_224_cov_532.137566_g62404_i0reverse_frame_2 - 0.13 11.2 0.0 0.13 11.2 0.0 1.0 1 0 0 1 1 1 0 Paf1 DUF3823 PF12866.7 NODE_70344_length_224_cov_1389.111111_g62403_i0forward_frame_3 - 0.16 12.2 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3823) N-terminal domain FANCM-MHF_bd PF16783.5 NODE_70341_length_225_cov_0.784211_g62400_i0reverse_frame_2 - 0.077 13.1 0.3 0.097 12.7 0.3 1.2 1 0 0 1 1 1 0 FANCM to MHF binding domain Glyco_hydro_31 PF01055.26 NODE_70341_length_225_cov_0.784211_g62400_i0forward_frame_2 - 9.8e-16 58.0 0.1 9.9e-16 57.9 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Melibiase_2 PF16499.5 NODE_70341_length_225_cov_0.784211_g62400_i0forward_frame_2 - 0.067 12.4 0.0 0.067 12.4 0.0 1.0 1 0 0 1 1 1 0 Alpha galactosidase A DUF1065 PF06358.11 NODE_70340_length_225_cov_0.836842_g62399_i0forward_frame_3 - 0.2 11.6 0.1 0.21 11.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1065) Dendrin PF15498.6 NODE_70339_length_225_cov_0.842105_g62398_i0reverse_frame_2 - 0.022 13.5 1.5 0.024 13.4 1.5 1.0 1 0 0 1 1 1 0 Nephrin and CD2AP-binding protein, Dendrin zf-Tim10_DDP PF02953.15 NODE_70337_length_225_cov_0.842105_g62396_i0forward_frame_3 - 0.028 14.1 0.0 0.042 13.5 0.0 1.4 1 0 0 1 1 1 0 Tim10/DDP family zinc finger DUF996 PF06195.13 NODE_70331_length_225_cov_0.842105_g62390_i0reverse_frame_3 - 0.0068 16.7 1.5 0.0072 16.6 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF996) SpecificRecomb PF10136.9 NODE_70330_length_225_cov_0.878947_g62389_i0reverse_frame_3 - 0.15 10.3 1.1 0.17 10.2 1.1 1.0 1 0 0 1 1 1 0 Site-specific recombinase Cys_knot PF00007.22 NODE_70330_length_225_cov_0.878947_g62389_i0reverse_frame_2 - 0.0047 17.2 2.4 0.0055 17.0 2.4 1.0 1 0 0 1 1 1 1 Cystine-knot domain Phage_holin_3_3 PF16083.5 NODE_70323_length_225_cov_0.963158_g62382_i0reverse_frame_3 - 0.017 15.2 0.1 0.019 15.0 0.1 1.3 1 1 0 1 1 1 0 LydA holin phage, holin superfamily III DUF4905 PF16248.5 NODE_70322_length_225_cov_1.000000_g62381_i0reverse_frame_2 - 0.067 13.1 0.1 0.071 13.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4905) Biopterin_H PF00351.21 NODE_70322_length_225_cov_1.000000_g62381_i0forward_frame_2 - 1.2e-30 106.7 0.0 1.3e-30 106.6 0.0 1.0 1 0 0 1 1 1 1 Biopterin-dependent aromatic amino acid hydroxylase zf-SAP30 PF13866.6 NODE_70321_length_225_cov_1.005263_g62380_i0forward_frame_2 - 0.056 13.6 0.1 0.079 13.1 0.1 1.2 1 0 0 1 1 1 0 SAP30 zinc-finger Thia_YuaJ PF09515.10 NODE_70319_length_225_cov_1.031579_g62378_i0forward_frame_2 - 0.027 14.5 0.2 0.039 14.0 0.2 1.2 1 0 0 1 1 1 0 Thiamine transporter protein (Thia_YuaJ) BSMAP PF12280.8 NODE_70316_length_225_cov_1.052632_g62375_i0forward_frame_3 - 8.1 6.6 5.5 10 6.2 5.5 1.1 1 0 0 1 1 1 0 Brain specific membrane anchored protein CDP-OH_P_transf PF01066.21 NODE_70313_length_225_cov_1.052632_g62372_i0reverse_frame_3 - 0.027 15.3 0.2 0.032 15.0 0.2 1.1 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase Ribosomal_L11 PF00298.19 NODE_70313_length_225_cov_1.052632_g62372_i0forward_frame_3 - 0.0089 16.5 0.2 0.012 16.1 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_S27e PF01667.17 NODE_70312_length_225_cov_1.052632_g62371_i0forward_frame_2 - 0.039 13.7 1.9 0.071 12.8 1.9 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 zinc_ribbon_6 PF14599.6 NODE_70312_length_225_cov_1.052632_g62371_i0forward_frame_2 - 0.05 13.6 2.8 0.11 12.6 2.8 1.7 1 1 0 1 1 1 0 Zinc-ribbon Zn_Tnp_IS91 PF14319.6 NODE_70312_length_225_cov_1.052632_g62371_i0forward_frame_2 - 0.063 13.3 0.8 0.084 12.9 0.8 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain FYVE_2 PF02318.16 NODE_70305_length_225_cov_1.126316_g62364_i0forward_frame_2 - 0.19 11.9 2.8 0.21 11.8 2.8 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger DUF4575 PF15143.6 NODE_70304_length_225_cov_1.126316_g62363_i0reverse_frame_3 - 0.06 13.6 0.1 0.06 13.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4575) zf_Hakai PF18408.1 NODE_70304_length_225_cov_1.126316_g62363_i0forward_frame_2 - 0.058 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 C2H2 Hakai zinc finger domain EIIC-GAT PF03611.14 NODE_70303_length_225_cov_1.147368_g62362_i0forward_frame_3 - 0.049 12.7 0.2 0.05 12.7 0.2 1.0 1 0 0 1 1 1 0 PTS system sugar-specific permease component PRCH PF03967.13 NODE_70303_length_225_cov_1.147368_g62362_i0forward_frame_2 - 0.53 10.5 1.6 0.78 10.0 1.6 1.2 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region DUF4787 PF16029.5 NODE_70302_length_225_cov_1.173684_g62361_i0forward_frame_3 - 0.05 13.7 0.6 0.066 13.3 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4787) DUF5447 PF17525.2 NODE_70301_length_225_cov_1.189474_g62360_i0reverse_frame_2 - 0.051 14.0 0.1 0.06 13.8 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5447) ABC2_membrane_6 PF06182.11 NODE_70300_length_225_cov_1.194737_g62359_i0reverse_frame_3 - 0.38 10.5 8.6 0.38 10.5 0.8 2.0 1 1 1 2 2 2 0 ABC-2 family transporter protein HemY_N PF07219.13 NODE_70300_length_225_cov_1.194737_g62359_i0reverse_frame_3 - 8.1 6.7 7.3 9.8 6.4 3.7 2.0 1 1 1 2 2 2 0 HemY protein N-terminus DUF5460 PF17544.2 NODE_70297_length_225_cov_1.221053_g62356_i0forward_frame_2 - 0.1 11.6 0.1 0.12 11.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5460) zf-C2H2_4 PF13894.6 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.00038 21.1 6.9 0.053 14.4 0.5 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.00075 19.7 3.2 0.091 13.1 0.3 2.5 2 1 0 2 2 2 2 Zinc-finger double-stranded RNA-binding Mut7-C PF01927.16 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.0026 17.8 1.1 0.0029 17.7 1.1 1.1 1 0 0 1 1 1 1 Mut7-C RNAse domain zf_C2H2_ZHX PF18387.1 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.026 14.2 0.7 0.026 14.2 0.7 1.7 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zf-met PF12874.7 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.031 14.7 5.6 0.27 11.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.045 14.2 5.4 0.062 13.8 0.6 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_2 PF12756.7 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 0.75 10.2 4.7 2.5 8.5 0.3 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) FYVE PF01363.21 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 1.8 8.8 11.2 3.5 7.8 1.0 2.1 1 1 1 2 2 2 0 FYVE zinc finger zf-C2H2_11 PF16622.5 NODE_70295_length_225_cov_1.242105_g62354_i0forward_frame_3 - 7.6 6.4 9.1 11 5.9 3.0 2.4 2 1 0 2 2 2 0 zinc-finger C2H2-type Poty_coat PF00767.18 NODE_70293_length_225_cov_1.257895_g62352_i0reverse_frame_2 - 0.0068 16.0 0.1 0.007 16.0 0.1 1.0 1 0 0 1 1 1 1 Potyvirus coat protein Arteri_Gl PF00951.18 NODE_70293_length_225_cov_1.257895_g62352_i0forward_frame_3 - 0.75 9.6 5.5 0.83 9.4 5.5 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein UPF0139 PF03669.13 NODE_70292_length_225_cov_1.257895_g62351_i0forward_frame_3 - 0.058 13.3 0.7 0.058 13.3 0.7 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0139) HEPN PF05168.14 NODE_70292_length_225_cov_1.257895_g62351_i0forward_frame_3 - 0.11 12.7 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 HEPN domain TILa PF12714.7 NODE_70289_length_225_cov_1.263158_g62348_i0reverse_frame_3 - 0.54 10.3 6.9 0.44 10.5 5.5 1.6 1 1 0 1 1 1 0 TILa domain zf-C3H2C3 PF17122.5 NODE_70289_length_225_cov_1.263158_g62348_i0forward_frame_3 - 0.66 10.1 4.4 1.5 8.9 4.5 1.6 1 1 0 1 1 1 0 Zinc-finger PUF PF00806.19 NODE_70288_length_225_cov_1.263158_g62347_i0reverse_frame_3 - 0.075 12.8 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat DUF2000 PF09391.10 NODE_70286_length_225_cov_1.263158_g62345_i0reverse_frame_2 - 0.09 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2000) FAM176 PF14851.6 NODE_70286_length_225_cov_1.263158_g62345_i0forward_frame_2 - 0.55 9.9 1.1 0.63 9.7 1.1 1.1 1 0 0 1 1 1 0 FAM176 family CysG_dimeriser PF10414.9 NODE_70282_length_225_cov_1.268421_g62341_i0reverse_frame_3 - 0.011 15.5 0.1 0.015 15.0 0.1 1.2 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region ADD_DNMT3 PF17980.1 NODE_70282_length_225_cov_1.268421_g62341_i0forward_frame_3 - 0.052 13.6 0.4 0.052 13.6 0.4 1.6 1 1 0 1 1 1 0 Cysteine rich ADD domain in DNMT3 Bactofilin PF04519.13 NODE_70281_length_225_cov_1.273684_g62340_i0forward_frame_3 - 0.0031 17.8 2.6 0.048 13.9 2.6 2.0 1 1 0 1 1 1 1 Polymer-forming cytoskeletal DUF2070 PF09843.9 NODE_70279_length_225_cov_1.294737_g62338_i0forward_frame_2 - 6.1 5.0 8.2 5.9 5.1 8.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) YfhO PF09586.10 NODE_70279_length_225_cov_1.294737_g62338_i0forward_frame_2 - 7.5 4.6 10.3 8 4.5 10.3 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Hexokinase_2 PF03727.16 NODE_70278_length_225_cov_1.315789_g62337_i0forward_frame_3 - 0.053 12.9 0.4 0.053 12.9 0.4 1.1 1 0 0 1 1 1 0 Hexokinase S_locus_glycop PF00954.20 NODE_70277_length_225_cov_1.331579_g62336_i0reverse_frame_3 - 0.21 12.1 3.1 0.29 11.6 3.1 1.4 1 1 0 1 1 1 0 S-locus glycoprotein domain RseC_MucC PF04246.12 NODE_70277_length_225_cov_1.331579_g62336_i0forward_frame_2 - 0.039 13.9 0.2 0.043 13.8 0.2 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF5432 PF17497.2 NODE_70275_length_225_cov_1.336842_g62334_i0forward_frame_2 - 0.13 12.4 0.5 0.13 12.4 0.5 1.7 2 1 0 2 2 2 0 Family of unknown function (DUF5432) WD40 PF00400.32 NODE_70274_length_225_cov_1.347368_g62333_i0forward_frame_2 - 0.0044 17.8 0.4 0.011 16.5 0.2 1.7 2 0 0 2 2 2 1 WD domain, G-beta repeat PQQ_3 PF13570.6 NODE_70274_length_225_cov_1.347368_g62333_i0forward_frame_2 - 0.075 13.5 0.0 1 10.0 0.0 2.0 2 0 0 2 2 2 0 PQQ-like domain Chlam_PMP PF02415.17 NODE_70273_length_225_cov_1.363158_g62332_i0reverse_frame_3 - 0.27 11.8 0.1 0.27 11.8 0.1 2.7 3 0 0 3 3 3 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat NPCC PF08058.11 NODE_70273_length_225_cov_1.363158_g62332_i0forward_frame_2 - 0.056 13.5 1.1 0.066 13.3 1.1 1.1 1 0 0 1 1 1 0 Nuclear pore complex component Lig_chan PF00060.26 NODE_70273_length_225_cov_1.363158_g62332_i0forward_frame_2 - 5 7.0 5.4 22 4.9 1.6 2.1 1 1 1 2 2 2 0 Ligand-gated ion channel RNA_pol_Rpb2_6 PF00562.28 NODE_70272_length_225_cov_1.363158_g62331_i0reverse_frame_2 - 2.6e-07 30.1 0.0 2.7e-07 30.0 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 DUF1934 PF09148.10 NODE_70272_length_225_cov_1.363158_g62331_i0reverse_frame_2 - 0.004 17.1 0.0 0.0043 17.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1934) EpuA PF11772.8 NODE_70270_length_225_cov_1.368421_g62329_i0forward_frame_2 - 0.14 11.8 0.1 0.22 11.3 0.1 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase subunit beta DUF1509 PF07420.11 NODE_70266_length_225_cov_1.378947_g62325_i0forward_frame_2 - 6.2 5.7 12.9 6.9 5.5 12.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Pkinase PF00069.25 NODE_70260_length_225_cov_1.410526_g62319_i0forward_frame_3 - 0.1 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain PNTB PF02233.16 NODE_70257_length_225_cov_1.431579_g62316_i0forward_frame_2 - 0.08 11.9 0.0 0.085 11.8 0.0 1.0 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit Ephrin_rec_like PF07699.13 NODE_70250_length_225_cov_1.473684_g62309_i0reverse_frame_3 - 5.2e-15 54.9 33.4 6.5e-08 32.2 5.5 2.4 1 1 2 3 3 3 3 Putative ephrin-receptor like NCD3G PF07562.14 NODE_70250_length_225_cov_1.473684_g62309_i0reverse_frame_3 - 3.7e-06 26.8 8.8 0.0023 17.9 2.1 2.2 2 0 0 2 2 2 2 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_70250_length_225_cov_1.473684_g62309_i0reverse_frame_3 - 0.00057 20.2 14.6 0.0084 16.5 3.5 3.4 1 1 3 4 4 4 4 TNFR/NGFR cysteine-rich region Neuregulin PF02158.15 NODE_70250_length_225_cov_1.473684_g62309_i0reverse_frame_3 - 0.0043 16.5 1.2 0.0043 16.5 1.2 1.1 1 0 0 1 1 1 1 Neuregulin intracellular region VSP PF03302.13 NODE_70250_length_225_cov_1.473684_g62309_i0reverse_frame_3 - 0.01 14.8 14.2 0.011 14.6 14.2 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein Phage_DsbA PF11126.8 NODE_70248_length_225_cov_1.473684_g62307_i0forward_frame_3 - 0.052 13.7 0.0 0.066 13.4 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator DsbA PAN_4 PF14295.6 NODE_70245_length_225_cov_1.505263_g62304_i0forward_frame_2 - 0.86 9.6 4.5 0.88 9.5 2.9 1.8 1 1 1 2 2 2 0 PAN domain Spermine_synt_N PF17284.2 NODE_70243_length_225_cov_1.521053_g62302_i0forward_frame_3 - 0.0046 16.8 0.0 0.0066 16.3 0.0 1.3 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain LysM PF01476.20 NODE_70240_length_225_cov_1.557895_g62299_i0forward_frame_2 - 0.024 14.7 0.1 0.035 14.2 0.1 1.3 1 0 0 1 1 1 0 LysM domain K1377 PF15352.6 NODE_70240_length_225_cov_1.557895_g62299_i0forward_frame_2 - 0.092 11.0 1.5 0.095 11.0 1.5 1.0 1 0 0 1 1 1 0 Susceptibility to monomelic amyotrophy MCR_C PF04609.12 NODE_70237_length_225_cov_1.578947_g62296_i0forward_frame_3 - 0.028 13.5 0.1 0.032 13.3 0.1 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase operon protein C TraB PF01963.17 NODE_70237_length_225_cov_1.578947_g62296_i0forward_frame_3 - 0.2 11.5 0.0 0.23 11.3 0.0 1.1 1 0 0 1 1 1 0 TraB family RT_RNaseH PF17917.1 NODE_70236_length_225_cov_1.578947_g62295_i0forward_frame_2 - 0.15 12.3 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 RNase H-like domain found in reverse transcriptase Chorion_2 PF03964.15 NODE_70234_length_225_cov_1.589474_g62293_i0reverse_frame_2 - 0.007 17.2 0.5 0.0076 17.1 0.5 1.1 1 0 0 1 1 1 1 Chorion family 2 DBD_Tnp_Mut PF03108.15 NODE_70232_length_225_cov_1.594737_g62291_i0reverse_frame_3 - 1.2 9.2 6.8 0.18 11.8 1.3 2.0 2 0 0 2 2 2 0 MuDR family transposase Fer4 PF00037.27 NODE_70230_length_225_cov_1.610526_g62289_i0forward_frame_2 - 1.2 9.1 9.0 11 6.0 0.2 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_70230_length_225_cov_1.610526_g62289_i0forward_frame_2 - 1.4 9.1 11.6 12 6.2 0.2 3.5 4 0 0 4 4 4 0 4Fe-4S binding domain DDE_Tnp_1_5 PF13737.6 NODE_70227_length_225_cov_1.626316_g62286_i0forward_frame_3 - 0.0045 17.3 0.4 0.0052 17.1 0.4 1.1 1 0 0 1 1 1 1 Transposase DDE domain DUF1631 PF07793.11 NODE_70225_length_225_cov_1.636842_g62284_i0reverse_frame_3 - 0.024 13.1 1.0 0.027 12.9 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) DUF832 PF05734.11 NODE_70223_length_225_cov_1.642105_g62282_i0forward_frame_2 - 0.12 11.8 0.1 0.12 11.8 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) DUF1624 PF07786.12 NODE_70221_length_225_cov_1.652632_g62280_i0reverse_frame_2 - 0.12 12.0 6.1 0.13 11.8 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1624) Cytochrom_C1 PF02167.15 NODE_70219_length_225_cov_1.657895_g62278_i0reverse_frame_2 - 0.025 14.3 0.0 5.6 6.6 0.0 2.0 1 1 1 2 2 2 0 Cytochrome C1 family DUF779 PF05610.11 NODE_70218_length_225_cov_1.663158_g62277_i0reverse_frame_3 - 0.0095 16.2 0.1 0.012 15.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF779) Kelch_1 PF01344.25 NODE_70215_length_225_cov_1.684211_g62274_i0forward_frame_3 - 6.4e-06 25.7 1.0 0.0098 15.5 0.4 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_70215_length_225_cov_1.684211_g62274_i0forward_frame_3 - 9e-05 22.6 0.2 0.025 14.9 0.1 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_70215_length_225_cov_1.684211_g62274_i0forward_frame_3 - 0.00021 21.2 0.5 0.44 10.6 0.0 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_70215_length_225_cov_1.684211_g62274_i0forward_frame_3 - 0.00066 19.9 0.0 0.0024 18.1 0.0 1.8 2 0 0 2 2 2 1 Galactose oxidase, central domain UNC119_bdg PF15435.6 NODE_70214_length_225_cov_1.684211_g62273_i0forward_frame_3 - 0.1 12.1 0.1 0.11 12.0 0.1 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue TIC20 PF16166.5 NODE_70213_length_225_cov_1.684211_g62272_i0reverse_frame_3 - 0.033 14.0 1.2 0.036 13.8 1.2 1.1 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like DUF3677 PF12432.8 NODE_70213_length_225_cov_1.684211_g62272_i0forward_frame_2 - 0.037 14.3 0.5 0.053 13.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3677) OrfB_Zn_ribbon PF07282.11 NODE_70212_length_225_cov_1.689474_g62271_i0reverse_frame_3 - 0.051 13.5 0.3 0.064 13.2 0.3 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Thx PF17070.5 NODE_70208_length_225_cov_1.736842_g62267_i0forward_frame_3 - 0.092 12.9 0.3 0.19 11.9 0.0 1.7 2 0 0 2 2 2 0 30S ribosomal protein Thx PgaD PF13994.6 NODE_70207_length_225_cov_1.736842_g62266_i0forward_frame_3 - 0.068 13.2 0.1 0.074 13.1 0.1 1.1 1 0 0 1 1 1 0 PgaD-like protein DUF4180 PF13788.6 NODE_70205_length_225_cov_1.757895_g62264_i0reverse_frame_2 - 0.022 14.7 0.2 0.024 14.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4180) UCH_N PF16674.5 NODE_70205_length_225_cov_1.757895_g62264_i0forward_frame_2 - 0.0022 17.9 0.0 0.0023 17.8 0.0 1.1 1 0 0 1 1 1 1 N-terminal of ubiquitin carboxyl-terminal hydrolase 37 AflR PF08493.10 NODE_70202_length_225_cov_1.826316_g62261_i0forward_frame_3 - 0.025 14.0 0.4 0.032 13.7 0.4 1.1 1 0 0 1 1 1 0 Aflatoxin regulatory protein Sortase PF04203.13 NODE_70197_length_225_cov_1.884211_g62256_i0reverse_frame_3 - 0.031 14.1 0.0 0.034 14.0 0.0 1.1 1 0 0 1 1 1 0 Sortase domain Kinesin PF00225.23 NODE_70193_length_225_cov_1.910526_g62252_i0forward_frame_3 - 7.4e-20 71.1 0.1 7.7e-20 71.1 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_70193_length_225_cov_1.910526_g62252_i0forward_frame_3 - 2.7e-15 56.6 0.1 3e-15 56.5 0.1 1.0 1 0 0 1 1 1 1 Microtubule binding Bac_DnaA PF00308.18 NODE_70193_length_225_cov_1.910526_g62252_i0forward_frame_3 - 0.023 14.5 0.0 0.025 14.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein DUF2256 PF10013.9 NODE_70191_length_225_cov_1.947368_g62250_i0forward_frame_3 - 0.011 15.9 0.2 0.011 15.9 0.2 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF3365 PF11845.8 NODE_70191_length_225_cov_1.947368_g62250_i0forward_frame_3 - 0.048 14.0 0.1 0.049 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3365) OrfB_Zn_ribbon PF07282.11 NODE_70191_length_225_cov_1.947368_g62250_i0forward_frame_3 - 2.1 8.3 5.3 0.59 10.1 0.7 2.1 1 1 1 2 2 2 0 Putative transposase DNA-binding domain TCR_zetazeta PF11628.8 NODE_70188_length_225_cov_1.957895_g62247_i0reverse_frame_2 - 0.47 10.2 4.5 0.55 10.0 0.1 2.2 2 0 0 2 2 2 0 T-cell surface glycoprotein CD3 zeta chain TIMELESS_C PF05029.13 NODE_70188_length_225_cov_1.957895_g62247_i0forward_frame_2 - 0.05 12.8 0.9 0.059 12.5 0.9 1.0 1 0 0 1 1 1 0 Timeless protein C terminal region RPN6_C_helix PF18503.1 NODE_70186_length_225_cov_2.021053_g62245_i0reverse_frame_2 - 0.28 11.0 1.9 0.53 10.1 0.1 2.2 3 0 0 3 3 3 0 26S proteasome subunit RPN6 C-terminal helix domain SHIPPO-rpt PF07004.12 NODE_70185_length_225_cov_2.052632_g62244_i0reverse_frame_2 - 0.0035 18.2 0.8 0.0079 17.1 0.8 1.6 1 0 0 1 1 1 1 Sperm-tail PG-rich repeat FANCI_HD1 PF14679.6 NODE_70183_length_225_cov_2.068421_g62242_i0forward_frame_2 - 0.075 13.0 0.1 0.099 12.6 0.1 1.2 1 0 0 1 1 1 0 FANCI helical domain 1 Pkinase PF00069.25 NODE_70182_length_225_cov_2.100000_g62241_i0reverse_frame_3 - 0.031 13.7 0.0 0.031 13.7 0.0 1.0 1 0 0 1 1 1 0 Protein kinase domain CRF-BP PF05428.11 NODE_70181_length_225_cov_2.100000_g62240_i0forward_frame_2 - 0.11 11.3 0.1 0.12 11.1 0.1 1.0 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) Pyr_redox_dim PF02852.22 NODE_70177_length_225_cov_2.178947_g62236_i0forward_frame_3 - 3e-12 46.8 0.1 3.6e-12 46.5 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FMO-like PF00743.19 NODE_70176_length_225_cov_2.231579_g62235_i0reverse_frame_3 - 0.065 11.6 0.0 0.066 11.6 0.0 1.0 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like APA3_viroporin PF11289.8 NODE_70174_length_225_cov_2.242105_g62233_i0reverse_frame_3 - 4.2 6.9 7.8 4.6 6.7 7.8 1.1 1 0 0 1 1 1 0 Coronavirus accessory protein 3a zf-RING_14 PF17978.1 NODE_70173_length_225_cov_2.247368_g62232_i0reverse_frame_3 - 0.0024 18.3 1.6 0.0027 18.1 1.6 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain CTK3 PF12243.8 NODE_70172_length_225_cov_2.247368_g62231_i0forward_frame_3 - 0.071 13.1 0.3 0.54 10.3 0.1 2.0 1 1 1 2 2 2 0 CTD kinase subunit gamma CTK3 MdcE PF06833.11 NODE_70170_length_225_cov_2.289474_g62229_i0reverse_frame_3 - 0.17 11.3 0.0 0.2 11.1 0.0 1.0 1 0 0 1 1 1 0 Malonate decarboxylase gamma subunit (MdcE) zf-P11 PF03854.14 NODE_70170_length_225_cov_2.289474_g62229_i0forward_frame_2 - 0.086 12.5 4.5 0.13 11.9 4.5 1.5 1 1 0 1 1 1 0 P-11 zinc finger zf-RING_UBOX PF13445.6 NODE_70168_length_225_cov_2.310526_g62227_i0reverse_frame_3 - 1.6 8.8 7.8 0.1 12.6 1.2 2.3 2 1 0 2 2 2 0 RING-type zinc-finger HCV_NS4a PF01006.20 NODE_70165_length_225_cov_2.326316_g62224_i0forward_frame_3 - 0.069 12.9 0.0 0.074 12.8 0.0 1.2 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS4a Sensor PF13796.6 NODE_70164_length_225_cov_2.331579_g62223_i0reverse_frame_3 - 0.039 14.0 0.0 0.04 14.0 0.0 1.0 1 0 0 1 1 1 0 Putative sensor DER1 PF04511.15 NODE_70162_length_225_cov_2.373684_g62221_i0forward_frame_2 - 0.022 14.7 0.0 0.024 14.6 0.0 1.0 1 0 0 1 1 1 0 Der1-like family Cgr1 PF03879.14 NODE_70160_length_225_cov_2.452632_g62219_i0reverse_frame_2 - 2.4 8.5 13.5 4.2 7.8 13.5 1.5 1 1 0 1 1 1 0 Cgr1 family TRAP-gamma PF07074.12 NODE_70160_length_225_cov_2.452632_g62219_i0reverse_frame_2 - 3.4 7.2 5.6 4 7.0 5.6 1.1 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) ubiquitin PF00240.23 NODE_70159_length_225_cov_2.473684_g62218_i0forward_frame_3 - 7.4e-14 51.3 0.0 9.8e-14 50.9 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_70159_length_225_cov_2.473684_g62218_i0forward_frame_3 - 7.7e-07 28.8 0.0 1e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 NODE_70159_length_225_cov_2.473684_g62218_i0forward_frame_3 - 0.13 12.4 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like zf-met PF12874.7 NODE_70155_length_225_cov_2.536842_g62214_i0reverse_frame_3 - 1.3e-08 34.9 2.2 2.6e-08 34.0 1.5 1.7 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-U1 PF06220.12 NODE_70155_length_225_cov_2.536842_g62214_i0reverse_frame_3 - 0.059 13.2 0.1 0.092 12.5 0.1 1.5 1 0 0 1 1 1 0 U1 zinc finger zf-C2H2_2 PF12756.7 NODE_70155_length_225_cov_2.536842_g62214_i0reverse_frame_3 - 0.083 13.2 1.1 0.1 12.9 1.1 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 NODE_70155_length_225_cov_2.536842_g62214_i0reverse_frame_3 - 1.2 9.5 6.0 2.8 8.3 5.2 2.1 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding Armet PF10208.9 NODE_70153_length_225_cov_2.610526_g62212_i0reverse_frame_3 - 0.0049 16.8 1.3 0.0055 16.6 1.3 1.0 1 0 0 1 1 1 1 Degradation arginine-rich protein for mis-folding SufE PF02657.15 NODE_70153_length_225_cov_2.610526_g62212_i0forward_frame_3 - 0.12 12.3 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Fe-S metabolism associated domain CBM_1 PF00734.18 NODE_70149_length_225_cov_2.668421_g62208_i0forward_frame_3 - 0.41 10.6 4.5 0.16 12.0 1.6 1.8 2 0 0 2 2 2 0 Fungal cellulose binding domain DUF3963 PF13124.6 NODE_70148_length_225_cov_2.678947_g62207_i0reverse_frame_2 - 0.037 14.0 0.3 0.065 13.2 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3963) Glyco_hydro_77 PF02446.17 NODE_70146_length_225_cov_2.742105_g62205_i0reverse_frame_2 - 0.075 11.9 0.0 0.08 11.8 0.0 1.0 1 0 0 1 1 1 0 4-alpha-glucanotransferase Polysacc_deac_1 PF01522.21 NODE_70144_length_225_cov_2.842105_g62203_i0reverse_frame_3 - 0.00016 21.6 0.0 0.00019 21.3 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide deacetylase IceA2 PF05862.11 NODE_70144_length_225_cov_2.842105_g62203_i0reverse_frame_3 - 0.076 12.9 0.0 0.095 12.6 0.0 1.1 1 0 0 1 1 1 0 Helicobacter pylori IceA2 protein Stomoxyn PF11585.8 NODE_70142_length_225_cov_2.978947_g62201_i0forward_frame_3 - 0.012 15.6 0.3 0.017 15.2 0.3 1.3 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn DUF2207 PF09972.9 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_2 - 0.063 12.0 11.9 0.069 11.9 11.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MgtE PF01769.16 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_2 - 0.14 12.6 8.1 0.14 12.6 8.1 1.0 1 0 0 1 1 1 0 Divalent cation transporter Phage_holin_3_6 PF07332.11 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_2 - 0.23 11.5 7.7 0.27 11.3 7.7 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III FA_desaturase PF00487.24 NODE_70141_length_225_cov_3.010526_g62200_i0reverse_frame_2 - 0.31 10.8 3.0 0.31 10.9 3.0 1.0 1 0 0 1 1 1 0 Fatty acid desaturase TRAP_alpha PF03896.16 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_3 - 0.26 10.4 4.1 0.24 10.6 4.1 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit DUF4637 PF15470.6 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_3 - 2 8.1 9.6 2.2 8.0 9.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DNA_pol_phi PF04931.13 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_3 - 3.4 5.7 16.8 3.7 5.5 16.8 1.0 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 NODE_70141_length_225_cov_3.010526_g62200_i0forward_frame_3 - 9.1 5.3 13.6 10 5.2 13.6 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein TraN PF06986.11 NODE_70140_length_225_cov_3.021053_g62199_i0reverse_frame_2 - 0.4 10.3 9.1 0.45 10.2 9.1 1.0 1 0 0 1 1 1 0 Type-1V conjugative transfer system mating pair stabilisation DUF4242 PF14026.6 NODE_70139_length_225_cov_3.068421_g62198_i0reverse_frame_3 - 0.042 14.0 0.2 0.049 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4242) Atrophin-1 PF03154.15 NODE_70139_length_225_cov_3.068421_g62198_i0reverse_frame_2 - 2.8 6.1 9.9 3 6.0 9.9 1.0 1 0 0 1 1 1 0 Atrophin-1 family ZU5 PF00791.20 NODE_70139_length_225_cov_3.068421_g62198_i0forward_frame_3 - 0.19 12.1 0.0 0.22 11.9 0.0 1.2 1 0 0 1 1 1 0 ZU5 domain DUF5544 PF17698.1 NODE_70137_length_225_cov_3.084211_g62196_i0forward_frame_2 - 0.0037 17.4 0.1 0.0043 17.2 0.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5544) Collagen_mid PF15984.5 NODE_70135_length_225_cov_3.178947_g62194_i0forward_frame_2 - 0.024 14.4 0.0 0.03 14.1 0.0 1.0 1 0 0 1 1 1 0 Bacterial collagen, middle region V_ATPase_I PF01496.19 NODE_70130_length_225_cov_3.415789_g62189_i0forward_frame_3 - 8.1e-08 30.7 0.0 8.6e-08 30.6 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family NICE-1 PF15845.5 NODE_70129_length_225_cov_3.494737_g62188_i0reverse_frame_3 - 0.15 12.9 4.2 0.19 12.5 4.2 1.1 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family LIFR_D2 PF17971.1 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_3 - 0.025 14.7 0.2 0.026 14.7 0.2 1.1 1 0 0 1 1 1 0 Leukemia inhibitory factor receptor D2 domain PPDK_N PF01326.19 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 0.18 11.1 3.3 0.21 10.8 3.3 1.0 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DUF1003 PF06210.11 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 0.22 11.6 1.8 0.23 11.6 1.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) DUF1664 PF07889.12 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 0.51 10.4 7.3 0.56 10.2 7.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DivIC PF04977.15 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 2.5 7.9 9.3 1.4 8.8 1.7 2.1 1 1 1 2 2 2 0 Septum formation initiator FAM76 PF16046.5 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 3.3 7.0 9.5 4.1 6.7 9.5 1.0 1 0 0 1 1 1 0 FAM76 protein XhlA PF10779.9 NODE_70128_length_225_cov_3.678947_g62187_i0forward_frame_2 - 3.6 7.9 8.3 0.68 10.2 3.1 1.9 1 1 1 2 2 2 0 Haemolysin XhlA Aminotran_1_2 PF00155.21 NODE_70126_length_225_cov_3.815789_g62185_i0reverse_frame_3 - 4.2e-17 62.4 0.0 4.3e-17 62.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II zf-CCHC PF00098.23 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_3 - 4.2e-07 29.7 0.7 6.8e-07 29.1 0.7 1.4 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_3 - 0.0013 18.5 0.8 0.0027 17.5 0.8 1.6 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_4 PF14392.6 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_3 - 0.11 12.2 0.7 0.18 11.5 0.7 1.3 1 0 0 1 1 1 0 Zinc knuckle WTX PF09422.10 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_2 - 1.1 8.2 3.5 1.1 8.3 3.5 1.0 1 0 0 1 1 1 0 WTX protein DUF2116 PF09889.9 NODE_70125_length_225_cov_3.978947_g62184_i0forward_frame_2 - 2.9 8.0 4.4 6.8 6.8 0.2 2.2 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF782 PF05614.11 NODE_70124_length_225_cov_4.357895_g62183_i0forward_frame_3 - 0.065 13.6 0.1 0.078 13.4 0.1 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) Glyco_hydro_16 PF00722.21 NODE_70123_length_225_cov_4.752632_g62182_i0reverse_frame_3 - 0.089 12.3 0.0 0.089 12.3 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 16 TPR_20 PF14561.6 NODE_70120_length_225_cov_18.857895_g62179_i0reverse_frame_2 - 0.03 14.7 0.0 0.035 14.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Mce4_CUP1 PF11887.8 NODE_70117_length_225_cov_21.631579_g62176_i0reverse_frame_3 - 0.22 11.0 0.4 0.24 10.8 0.4 1.0 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative Vpu PF00558.19 NODE_70113_length_225_cov_32.868421_g62172_i0forward_frame_2 - 0.075 12.8 0.5 0.089 12.6 0.5 1.3 1 1 0 1 1 1 0 Vpu protein HGWP PF03578.15 NODE_70112_length_225_cov_32.894737_g62171_i0forward_frame_3 - 0.057 12.9 0.2 0.089 12.3 0.2 1.3 1 0 0 1 1 1 0 HGWP repeat DUF3509 PF12021.8 NODE_70112_length_225_cov_32.894737_g62171_i0forward_frame_2 - 0.091 12.5 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3509) zf-RING_4 PF14570.6 NODE_70111_length_225_cov_34.415789_g62170_i0forward_frame_2 - 0.062 13.1 0.4 0.062 13.1 0.4 1.7 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Cadherin_tail PF15974.5 NODE_70109_length_225_cov_35.110526_g62168_i0reverse_frame_3 - 0.03 14.7 2.3 0.034 14.5 2.3 1.1 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region OPT PF03169.15 NODE_70109_length_225_cov_35.110526_g62168_i0forward_frame_3 - 0.033 12.8 0.0 0.039 12.6 0.0 1.1 1 0 0 1 1 1 0 OPT oligopeptide transporter protein Seryl_tRNA_N PF02403.22 NODE_70107_length_225_cov_39.347368_g62166_i0reverse_frame_3 - 7.4e-10 39.0 2.6 8.4e-10 38.8 2.6 1.0 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Ank_2 PF12796.7 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 1.7e-06 28.5 0.0 2.1e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 6.5e-06 26.4 0.0 0.00036 20.8 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 3.5e-05 24.3 0.0 4.9e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 0.0053 17.0 0.0 0.006 16.9 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_70102_length_225_cov_50.642105_g62161_i0reverse_frame_3 - 0.0069 16.8 0.0 0.013 16.0 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat XFP_N PF09364.10 NODE_70102_length_225_cov_50.642105_g62161_i0forward_frame_2 - 0.2 10.4 0.0 0.22 10.3 0.0 1.0 1 0 0 1 1 1 0 XFP N-terminal domain ZNRF_3_ecto PF18212.1 NODE_70101_length_225_cov_50.657895_g62160_i0forward_frame_3 - 0.026 14.5 0.0 0.029 14.3 0.0 1.1 1 0 0 1 1 1 0 ZNRF-3 Ectodomain Copine PF07002.16 NODE_70100_length_225_cov_51.500000_g62159_i0forward_frame_3 - 2.3e-08 33.8 0.0 2.7e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 Copine TMEM173 PF15009.6 NODE_70100_length_225_cov_51.500000_g62159_i0forward_frame_3 - 0.039 13.1 0.0 0.044 12.9 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 173 Doppel PF11466.8 NODE_70099_length_225_cov_51.747368_g62158_i0forward_frame_2 - 0.016 14.8 2.0 0.016 14.8 2.0 1.5 2 0 0 2 2 2 0 Prion-like protein Doppel SLR1-BP PF07333.12 NODE_70098_length_225_cov_52.226316_g62157_i0reverse_frame_2 - 0.021 15.3 6.0 0.029 14.8 6.0 1.2 1 0 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Fijivirus_P9-2 PF06837.11 NODE_70096_length_225_cov_55.268421_g62155_i0forward_frame_3 - 6.4 6.2 10.1 7.2 6.0 10.1 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein Y_Y_Y PF07495.13 NODE_70095_length_225_cov_55.326316_g62154_i0reverse_frame_2 - 0.032 14.2 0.2 0.037 14.0 0.2 1.1 1 0 0 1 1 1 0 Y_Y_Y domain Fer2_4 PF13510.6 NODE_70094_length_225_cov_55.873684_g62153_i0reverse_frame_2 - 0.0044 17.0 1.5 0.0056 16.7 1.5 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain DUF4179 PF13786.6 NODE_70094_length_225_cov_55.873684_g62153_i0reverse_frame_2 - 0.61 10.6 3.3 1.5 9.4 3.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4179) TPR_14 PF13428.6 NODE_70093_length_225_cov_56.242105_g62152_i0forward_frame_3 - 0.067 14.0 0.0 0.22 12.4 0.0 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat zf-ribbon_3 PF13248.6 NODE_70093_length_225_cov_56.242105_g62152_i0forward_frame_2 - 0.27 10.7 7.2 0.19 11.2 2.7 2.1 2 0 0 2 2 2 0 zinc-ribbon domain C6_DPF PF10170.9 NODE_70090_length_225_cov_61.515789_g62149_i0reverse_frame_2 - 3.6e-14 52.9 2.7 5.8e-14 52.2 2.7 1.3 1 0 0 1 1 1 1 Cysteine-rich domain DUF1836 PF08876.11 NODE_70086_length_225_cov_68.373684_g62145_i0reverse_frame_3 - 0.023 14.7 3.6 0.026 14.5 3.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1836) DAPDH_C PF16654.5 NODE_70086_length_225_cov_68.373684_g62145_i0reverse_frame_3 - 0.026 14.4 0.2 0.026 14.4 0.2 1.0 1 0 0 1 1 1 0 Diaminopimelic acid dehydrogenase C-terminal domain CxC6 PF18721.1 NODE_70086_length_225_cov_68.373684_g62145_i0reverse_frame_2 - 0.076 13.3 3.0 0.1 12.9 3.0 1.2 1 0 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases DUF2492 PF10678.9 NODE_70085_length_225_cov_69.289474_g62144_i0reverse_frame_3 - 0.043 14.1 0.3 0.061 13.6 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2492) DUF410 PF04190.13 NODE_70082_length_225_cov_71.878947_g62141_i0reverse_frame_3 - 0.055 13.3 0.2 0.063 13.1 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF410) SVWC PF15430.6 NODE_70081_length_225_cov_74.900000_g62140_i0forward_frame_3 - 0.026 14.8 0.3 0.035 14.4 0.3 1.1 1 0 0 1 1 1 0 Single domain von Willebrand factor type C YMF19 PF02326.15 NODE_70081_length_225_cov_74.900000_g62140_i0forward_frame_2 - 0.018 15.8 1.5 0.02 15.7 1.5 1.3 1 1 0 1 1 1 0 Plant ATP synthase F0 ICAP-1_inte_bdg PF10480.9 NODE_70074_length_225_cov_90.526316_g62133_i0forward_frame_2 - 0.43 10.5 8.5 0.51 10.3 8.5 1.1 1 0 0 1 1 1 0 Beta-1 integrin binding protein ATP13 PF12921.7 NODE_70071_length_225_cov_97.605263_g62130_i0reverse_frame_3 - 0.06 13.2 0.1 0.064 13.1 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ATPase expression Ole-e-6 PF09253.10 NODE_70069_length_225_cov_105.731579_g62128_i0forward_frame_2 - 0.085 12.8 0.5 0.14 12.2 0.5 1.4 1 0 0 1 1 1 0 Pollen allergen ole e 6 Glyco_transf_25 PF01755.17 NODE_70068_length_225_cov_112.436842_g62127_i0forward_frame_3 - 3.1e-11 43.5 0.0 3.1e-11 43.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) VESA1_N PF12785.7 NODE_70068_length_225_cov_112.436842_g62127_i0forward_frame_2 - 1.6 7.7 8.6 1.7 7.5 8.6 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 PHD_Oberon PF07227.11 NODE_70065_length_225_cov_114.521053_g62124_i0forward_frame_2 - 0.021 14.7 1.2 0.021 14.7 1.2 1.2 1 0 0 1 1 1 0 PHD - plant homeodomain finger protein Med26 PF08711.11 NODE_70060_length_225_cov_133.452632_g62119_i0forward_frame_3 - 0.17 11.9 0.1 8.6 6.5 0.0 2.1 1 1 1 2 2 2 0 TFIIS helical bundle-like domain WBP-1 PF11669.8 NODE_70058_length_225_cov_159.194737_g62117_i0reverse_frame_2 - 0.016 15.8 2.4 0.021 15.5 2.4 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 ROS_MUCR PF05443.11 NODE_70058_length_225_cov_159.194737_g62117_i0reverse_frame_2 - 0.046 13.8 0.3 0.064 13.3 0.3 1.2 1 0 0 1 1 1 0 ROS/MUCR transcriptional regulator protein BHD_3 PF10405.9 NODE_70054_length_225_cov_199.857895_g62113_i0forward_frame_2 - 0.00044 20.6 0.0 0.00063 20.1 0.0 1.3 1 0 0 1 1 1 1 Rad4 beta-hairpin domain 3 FAO_M PF16350.5 NODE_70053_length_225_cov_246.905263_g62112_i0reverse_frame_3 - 0.03 14.7 0.2 0.049 14.0 0.2 1.4 1 1 0 1 1 1 0 FAD dependent oxidoreductase central domain Mid1 PF12929.7 NODE_70053_length_225_cov_246.905263_g62112_i0forward_frame_3 - 0.084 12.0 1.5 0.088 12.0 1.5 1.0 1 0 0 1 1 1 0 Stretch-activated Ca2+-permeable channel component MaoC_dehydratas PF01575.19 NODE_70047_length_225_cov_1355.284211_g62106_i0reverse_frame_2 - 0.0065 16.0 0.0 0.84 9.2 0.0 2.0 1 1 1 2 2 2 2 MaoC like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks365.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks365.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks365.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks365.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:21:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ETRAMP PF09716.10 NODE_70046_length_225_cov_81283.589474_g62105_i0forward_frame_2 - 0.047 13.8 0.1 0.058 13.5 0.1 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) EGF_Tenascin PF18720.1 ORF99912 - 1.3 9.2 5.8 0.32 11.1 2.6 1.6 2 0 0 2 2 2 0 Tenascin EGF domain DUF2054 PF10218.9 ORF99645 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) SecM PF06558.12 ORF98881 - 2e-20 73.4 0.2 2.2e-20 73.2 0.2 1.0 1 0 0 1 1 1 1 Secretion monitor precursor protein (SecM) RALF PF05498.11 ORF98123 - 0.0062 17.5 0.1 0.0086 17.0 0.1 1.3 1 0 0 1 1 1 1 Rapid ALkalinization Factor (RALF) DUF759 PF05537.11 ORF97921 - 6.4e-05 22.0 0.6 6.8e-05 21.9 0.6 1.0 1 0 0 1 1 1 1 Borrelia burgdorferi protein of unknown function (DUF759) Ribosomal_L40e PF01020.17 ORF97592 - 0.082 12.8 3.6 0.98 9.4 3.8 2.2 2 1 0 2 2 2 0 Ribosomal L40e family LapA_dom PF06305.11 ORF97252 - 0.13 12.1 0.5 0.26 11.1 0.5 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain HIPIP PF01355.17 ORF96554 - 0.073 13.4 1.9 0.096 13.1 1.9 1.2 1 0 0 1 1 1 0 High potential iron-sulfur protein MYO10_CC PF16735.5 ORF96521 - 0.031 14.4 3.5 0.036 14.2 2.9 1.4 1 1 0 1 1 1 0 Unconventional myosin-X coiled coil domain Phage_holin_4_2 PF04020.13 ORF96356 - 0.021 15.5 2.5 0.029 15.0 2.5 1.2 1 0 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV BRCC36_C PF18110.1 ORF96123 - 0.066 13.4 0.2 0.084 13.0 0.2 1.1 1 0 0 1 1 1 0 BRCC36 C-terminal helical domain DUF2054 PF10218.9 ORF9610 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) KCNQC3-Ank-G_bd PF11956.8 ORF95615 - 0.08 13.2 0.0 0.095 13.0 0.0 1.2 1 0 0 1 1 1 0 Ankyrin-G binding motif of KCNQ2-3 HELP PF03451.14 ORF95351 - 0.00052 19.8 0.0 0.00065 19.5 0.0 1.2 1 0 0 1 1 1 1 HELP motif Haem_bd PF14376.6 ORF94957 - 0.033 14.1 0.7 0.035 14.0 0.7 1.0 1 0 0 1 1 1 0 Haem-binding domain UPF0370 PF13980.6 ORF94957 - 0.22 11.6 1.4 0.27 11.3 0.3 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0370) DUF2054 PF10218.9 ORF93493 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) TPR_11 PF13414.6 ORF93077 - 0.079 12.7 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 TPR repeat DUF4762 PF15959.5 ORF9292 - 0.012 15.6 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4762) DUF3951 PF13131.6 ORF92291 - 0.083 13.1 3.5 0.16 12.2 3.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3951) Phage_holin_3_6 PF07332.11 ORF92291 - 0.85 9.7 4.1 1 9.4 4.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2706 PF10913.8 ORF92282 - 0.094 12.6 1.4 0.11 12.4 0.0 1.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2706) TPR_8 PF13181.6 ORF9175 - 0.0012 18.8 0.9 0.077 13.2 0.0 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF9175 - 0.0035 17.2 0.0 0.019 15.0 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF9175 - 0.0044 17.0 1.1 0.19 11.9 0.0 3.0 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF9175 - 0.0086 15.9 5.5 0.14 12.1 0.3 3.7 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF9175 - 0.04 14.5 0.0 0.2 12.4 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF9175 - 0.052 13.9 0.0 0.27 11.7 0.0 2.1 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF2197 PF09963.9 ORF91470 - 0.051 13.8 0.1 0.073 13.3 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) AFP PF02420.15 ORF90492 - 0.14 12.6 0.4 0.14 12.6 0.4 1.6 2 0 0 2 2 2 0 Insect antifreeze protein repeat DUF2430 PF10353.9 ORF8992 - 0.011 16.1 0.9 0.012 16.0 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2430) Comm PF15957.5 ORF8992 - 0.7 10.3 6.5 0.75 10.2 6.5 1.1 1 0 0 1 1 1 0 Commissureless Phage_holin_4_2 PF04020.13 ORF89735 - 0.021 15.5 2.5 0.029 15.0 2.5 1.2 1 0 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV zf-trcl PF13451.6 ORF89628 - 0.08 12.8 0.7 0.12 12.3 0.1 1.6 2 0 0 2 2 2 0 Probable zinc-ribbon domain CSD PF00313.22 ORF8954 - 6.3e-29 99.6 0.2 7.1e-29 99.5 0.2 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF8954 - 0.00086 18.9 0.1 0.0012 18.5 0.1 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain Amidase_6 PF12671.7 ORF8954 - 0.082 13.0 0.0 0.084 13.0 0.0 1.0 1 0 0 1 1 1 0 Putative amidase domain zf-C3H2C3 PF17122.5 ORF89299 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF89299 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family Colipase-like PF15083.6 ORF89244 - 0.08 13.1 3.7 0.096 12.8 3.7 1.2 1 0 0 1 1 1 0 Colipase-like GSAP-16 PF14959.6 ORF88918 - 0.062 13.2 0.2 0.067 13.1 0.2 1.1 1 0 0 1 1 1 0 gamma-Secretase-activating protein C-term CHS5_N PF16892.5 ORF88683 - 0.093 12.7 0.1 0.15 12.0 0.1 1.4 1 0 0 1 1 1 0 Chitin biosynthesis protein CHS5 N-terminus Toxin_5 PF05294.13 ORF88468 - 0.16 12.4 0.4 0.16 12.4 0.4 2.8 2 1 0 2 2 2 0 Scorpion short toxin Orthopox_F8 PF05886.11 ORF87192 - 0.009 16.1 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 Orthopoxvirus F8 protein p47_phox_C PF08944.11 ORF86750 - 0.62 9.5 4.7 2.5 7.6 0.1 2.7 3 0 0 3 3 3 0 NADPH oxidase subunit p47Phox, C terminal domain Benyvirus_P25 PF05744.11 ORF85952 - 0.067 12.5 1.6 0.075 12.3 1.6 1.0 1 0 0 1 1 1 0 Benyvirus P25/P26 protein C4 PF01413.19 ORF85464 - 0.0014 19.0 0.2 0.0017 18.7 0.2 1.1 1 0 0 1 1 1 1 C-terminal tandem repeated domain in type 4 procollagen IFNGR1 PF07140.11 ORF85397 - 0.031 14.4 2.2 0.035 14.2 2.2 1.1 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) WBP-1 PF11669.8 ORF84756 - 0.052 14.2 0.3 0.055 14.1 0.3 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 BKACE PF05853.12 ORF84332 - 0.26 10.6 0.0 0.27 10.5 0.0 1.0 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme US22 PF02393.16 ORF83514 - 0.35 11.1 2.4 0.37 11.0 2.4 1.1 1 0 0 1 1 1 0 US22 like YTH PF04146.15 ORF83392 - 2.5e-13 50.3 0.0 2.7e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 YT521-B-like domain Ntox21 PF15526.6 ORF83026 - 0.063 13.6 0.1 0.071 13.4 0.1 1.1 1 0 0 1 1 1 0 Novel toxin 21 CCER1 PF15482.6 ORF82029 - 0.012 15.5 4.9 0.012 15.5 4.9 1.4 1 1 1 2 2 2 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF2054 PF10218.9 ORF82022 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) DUF3750 PF12570.8 ORF8088 - 0.092 13.4 0.0 0.12 13.0 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3750) CBP_BcsR PF10945.8 ORF80877 - 0.051 13.1 0.0 0.075 12.5 0.0 1.3 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR DUF3244 PF11589.8 ORF80718 - 0.051 13.7 0.1 0.057 13.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3244) DUF3156 PF11354.8 ORF80275 - 0.021 14.7 0.4 0.022 14.7 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3156) RhoGEF67_u2 PF16614.5 ORF80275 - 0.045 13.8 0.7 0.055 13.6 0.7 1.1 1 0 0 1 1 1 0 Unstructured region two on RhoGEF 6 and 7 Reticulon PF02453.17 ORF79763 - 0.2 11.6 5.9 0.25 11.3 5.8 1.2 1 1 0 1 1 1 0 Reticulon DUF2054 PF10218.9 ORF79322 - 0.024 14.8 1.8 0.027 14.6 1.8 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) DNA_ligase_IV PF11411.8 ORF79103 - 1.9e-06 27.9 0.0 2.7e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 DNA ligase IV OmdA PF13376.6 ORF79103 - 0.14 12.2 0.0 10 6.2 0.0 2.4 1 1 1 2 2 2 0 Bacteriocin-protection, YdeI or OmpD-Associated Herpes_pp38 PF04846.13 ORF77950 - 0.55 10.2 2.4 0.38 10.7 0.8 1.6 1 1 1 2 2 2 0 Herpesvirus pp38 phosphoprotein SPT_ssu-like PF11779.8 ORF77916 - 0.012 15.2 0.5 0.021 14.5 0.5 1.4 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like SieB PF14163.6 ORF77916 - 0.04 13.4 0.4 0.04 13.4 0.4 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B DUF2371 PF10177.9 ORF77916 - 0.73 10.0 2.2 1.6 8.9 2.2 1.5 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2371) DUF2418 PF10332.9 ORF77249 - 1.5 9.4 4.7 0.95 10.0 0.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2418) zf-P11 PF03854.14 ORF76338 - 0.033 13.9 1.3 0.033 13.9 1.3 1.7 2 1 0 2 2 2 0 P-11 zinc finger Spc110_C PF18520.1 ORF76338 - 0.15 11.7 0.2 8.8 6.0 0.5 2.2 1 1 1 2 2 2 0 Spindle pole body component 110 C-terminal domain TerY_C PF15616.6 ORF76037 - 0.092 12.9 0.5 0.096 12.8 0.5 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain Cas_csx3 PF09620.10 ORF75693 - 0.11 12.4 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_csx3) NDUF_B7 PF05676.13 ORF75544 - 1.7 8.4 8.3 0.14 11.9 1.8 2.2 2 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Colipase PF01114.18 ORF75335 - 0.015 15.0 0.8 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 Colipase, N-terminal domain Rho_N PF07498.12 ORF75324 - 0.077 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Rho termination factor, N-terminal domain Peptidase_C34 PF05413.11 ORF75324 - 0.16 12.2 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 Putative closterovirus papain-like endopeptidase Phage_holin_4_2 PF04020.13 ORF75267 - 0.021 15.5 2.5 0.029 15.0 2.5 1.2 1 0 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV Toxin_12 PF07740.12 ORF75172 - 0.59 10.9 6.1 1.8 9.3 3.7 2.2 1 1 1 2 2 2 0 Ion channel inhibitory toxin TMEM171 PF15471.6 ORF7498 - 0.062 12.3 0.5 0.08 11.9 0.2 1.4 1 1 0 1 1 1 0 Transmembrane protein family 171 TusA PF01206.17 ORF74543 - 0.084 12.7 0.2 0.2 11.5 0.1 1.6 2 0 0 2 2 2 0 Sulfurtransferase TusA DUF4777 PF16007.5 ORF74543 - 0.22 11.8 2.9 1.5 9.2 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4777) DUF5013 PF16405.5 ORF74472 - 0.085 13.1 0.0 0.089 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5013) Anoct_dimer PF16178.5 ORF74314 - 0.063 13.0 0.0 0.077 12.7 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain of Ca+-activated chloride-channel, anoctamin HMA PF00403.26 ORF7424 - 0.0011 19.4 0.2 0.0014 19.0 0.2 1.3 1 0 0 1 1 1 1 Heavy-metal-associated domain Ldt_C PF17969.1 ORF74239 - 0.11 13.2 1.2 0.16 12.7 1.2 1.5 1 1 0 1 1 1 0 L,D-transpeptidase C-terminal domain DUF2054 PF10218.9 ORF73128 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) DUF2054 PF10218.9 ORF72806 - 0.015 15.4 2.4 0.018 15.2 2.4 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) UvrA_inter PF17760.1 ORF71802 - 0.12 12.5 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 UvrA interaction domain Pox_G7 PF05503.12 ORF71573 - 0.11 11.5 0.1 0.11 11.5 0.1 1.0 1 0 0 1 1 1 0 Poxvirus G7-like Herpes_LMP2 PF07415.11 ORF71267 - 0.59 8.9 8.2 0.67 8.7 8.2 1.0 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein HTH_Tnp_ISL3 PF13542.6 ORF70797 - 0.057 12.8 0.1 0.075 12.5 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 zf-C3HC4_2 PF13923.6 ORF70169 - 0.00034 20.4 1.5 0.00034 20.4 1.5 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF70169 - 0.01 15.6 2.1 0.01 15.6 2.1 2.0 2 0 0 2 2 2 1 RING-like zinc finger Ribosomal_L2_C PF03947.18 ORF70163 - 0.073 13.3 0.3 0.073 13.3 0.3 1.1 1 0 0 1 1 1 0 Ribosomal Proteins L2, C-terminal domain XRN_N PF03159.18 ORF69922 - 0.059 12.8 0.1 0.059 12.8 0.1 1.1 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus Carboxyl_trans PF01039.22 ORF69692 - 0.27 9.8 0.0 0.28 9.7 0.0 1.0 1 0 0 1 1 1 0 Carboxyl transferase domain UPF0029 PF01205.19 ORF69373 - 0.14 12.5 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0029 zf-C3H2C3 PF17122.5 ORF68617 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF68617 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family PH PF00169.29 ORF6831 - 0.0017 18.9 0.1 0.003 18.0 0.1 1.4 1 0 0 1 1 1 1 PH domain PH_6 PF15406.6 ORF6831 - 0.0053 17.0 0.0 0.0084 16.4 0.0 1.3 1 0 0 1 1 1 1 Pleckstrin homology domain PH_3 PF14593.6 ORF6831 - 0.0083 16.2 0.1 0.012 15.7 0.1 1.3 1 0 0 1 1 1 1 PH domain PH_8 PF15409.6 ORF6831 - 0.0091 16.3 0.0 0.016 15.4 0.0 1.5 1 0 0 1 1 1 1 Pleckstrin homology domain Mcp5_PH PF12814.7 ORF6831 - 0.022 14.9 0.0 0.029 14.5 0.0 1.2 1 0 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology rpo30_N PF12410.8 ORF6831 - 0.039 13.8 0.0 0.043 13.7 0.0 1.0 1 0 0 1 1 1 0 Poxvirus DNA dependent RNA polymerase 30kDa subunit PH_11 PF15413.6 ORF6831 - 0.051 14.0 0.2 0.089 13.2 0.1 1.4 2 0 0 2 2 2 0 Pleckstrin homology domain amfpi-1 PF12190.8 ORF68070 - 0.03 14.9 1.4 0.12 13.0 0.1 2.0 2 0 0 2 2 2 0 Fungal protease inhibitor Pns11_12 PF17464.2 ORF67467 - 0.14 11.9 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 Non-structural protein 11 and 12 TPR_8 PF13181.6 ORF67215 - 0.0012 18.8 0.9 0.077 13.2 0.0 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF67215 - 0.0035 17.2 0.0 0.019 15.0 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF67215 - 0.0044 17.0 1.1 0.19 11.9 0.0 3.0 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF67215 - 0.0086 15.9 5.5 0.14 12.1 0.3 3.7 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF67215 - 0.04 14.5 0.0 0.2 12.4 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF67215 - 0.052 13.9 0.0 0.27 11.7 0.0 2.1 2 1 0 2 2 2 0 Tetratricopeptide repeat Adeno_E3 PF06040.11 ORF6672 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Adenovirus E3 protein NDUF_B7 PF05676.13 ORF66164 - 1.7 8.4 8.3 0.14 11.9 1.8 2.2 2 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) JHY PF15261.6 ORF6598 - 0.00024 21.8 0.3 0.00024 21.8 0.3 1.1 1 0 0 1 1 1 1 Jhy protein SMN PF06003.12 ORF65326 - 0.055 12.7 0.0 0.063 12.5 0.0 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) CobW_C PF07683.14 ORF65069 - 4e-09 36.3 0.0 5e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain B3 PF02362.21 ORF64984 - 0.041 13.8 1.2 0.05 13.5 1.2 1.1 1 0 0 1 1 1 0 B3 DNA binding domain HNH_repeat PF18780.1 ORF63915 - 0.2 11.5 2.0 0.28 11.0 2.0 1.2 1 0 0 1 1 1 0 Homing endonuclease repeat DUF2303 PF10065.9 ORF6341 - 0.029 13.5 0.0 0.032 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) Bromo_TP PF07524.13 ORF6341 - 0.046 13.7 0.1 0.07 13.1 0.1 1.3 1 0 0 1 1 1 0 Bromodomain associated YitT_membrane PF02588.15 ORF63309 - 0.0029 17.0 0.9 0.0029 17.0 0.9 1.1 1 0 0 1 1 1 1 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DUF2054 PF10218.9 ORF63159 - 0.018 15.1 1.9 0.021 14.9 1.9 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) Ndc1_Nup PF09531.10 ORF62589 - 8.5 4.9 12.9 9.1 4.8 12.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup MTBP_C PF14920.6 ORF62570 - 0.087 12.6 0.4 0.091 12.5 0.4 1.1 1 0 0 1 1 1 0 MDM2-binding DMT_6 PF04342.12 ORF61925 - 0.01 16.1 1.0 0.012 15.8 1.0 1.1 1 0 0 1 1 1 1 Putative member of DMT superfamily (DUF486) RAI16-like PF10257.9 ORF61925 - 0.029 13.3 0.2 0.029 13.3 0.2 1.0 1 0 0 1 1 1 0 Retinoic acid induced 16-like protein MgtE PF01769.16 ORF61595 - 0.085 13.2 10.5 0.089 13.2 10.5 1.1 1 0 0 1 1 1 0 Divalent cation transporter Ferlin_C PF16165.5 ORF61595 - 4.6 7.2 11.0 6.1 6.8 11.0 1.3 1 0 0 1 1 1 0 Ferlin C-terminus NR_Repeat PF14046.6 ORF61073 - 0.013 15.6 0.1 0.019 15.1 0.1 1.3 1 0 0 1 1 1 0 Nuclear receptor repeat Colipase PF01114.18 ORF61020 - 0.015 15.0 0.8 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 Colipase, N-terminal domain Cupredoxin_1 PF13473.6 ORF6063 - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Cupredoxin-like domain VDE PF07137.11 ORF60495 - 0.051 13.1 0.6 0.051 13.1 0.6 1.1 1 0 0 1 1 1 0 VDE lipocalin domain Methyltransf_13 PF08421.11 ORF60358 - 0.0064 16.7 0.1 0.0084 16.3 0.1 1.2 1 0 0 1 1 1 1 Putative zinc binding domain dsRBD2 PF17842.1 ORF60344 - 0.49 10.6 2.6 0.45 10.7 1.7 1.5 1 1 1 2 2 2 0 Double-stranded RNA binding domain 2 PsbX PF06596.11 ORF60263 - 0.1 12.6 0.9 3.4 7.8 0.3 2.2 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) 4F5 PF04419.14 ORF60170 - 0.00017 22.4 10.7 0.00024 21.9 10.7 1.3 1 0 0 1 1 1 1 4F5 protein family zf-Di19 PF05605.12 ORF60170 - 0.0017 18.6 0.6 0.0026 18.0 0.6 1.3 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-met2 PF12907.7 ORF60170 - 0.0017 18.4 1.0 0.0036 17.4 1.0 1.6 1 0 0 1 1 1 1 Zinc-binding zf-C2H2_4 PF13894.6 ORF60170 - 0.021 15.6 1.1 0.049 14.5 1.1 1.6 1 0 0 1 1 1 0 C2H2-type zinc finger APCDDC PF14921.6 ORF59376 - 0.019 14.4 0.2 0.019 14.4 0.2 1.0 1 0 0 1 1 1 0 Adenomatosis polyposis coli down-regulated 1 RAG2_PHD PF13341.6 ORF59376 - 0.033 14.2 0.1 0.047 13.8 0.1 1.3 1 0 0 1 1 1 0 RAG2 PHD domain zf-C3H2C3 PF17122.5 ORF58784 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF58784 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family CBM32 PF18344.1 ORF58717 - 0.11 12.3 1.3 0.14 12.0 0.6 1.6 1 1 0 1 1 1 0 Carbohydrate binding module family 32 Pet191_N PF10203.9 ORF58029 - 0.038 14.3 5.0 0.038 14.3 5.0 1.9 2 0 0 2 2 2 0 Cytochrome c oxidase assembly protein PET191 DUF892 PF05974.12 ORF58029 - 0.12 12.3 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF892) Cmc1 PF08583.10 ORF57253 - 0.12 12.4 5.9 0.49 10.5 5.9 1.8 1 1 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like CENP-R PF06729.12 ORF57069 - 0.018 15.0 0.2 0.019 14.9 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R ABC_tran_Xtn PF12848.7 ORF57069 - 0.36 10.9 3.4 5.4 7.1 0.4 2.0 1 1 1 2 2 2 0 ABC transporter Acetyltransf_18 PF18014.1 ORF56234 - 0.15 11.9 2.1 0.16 11.8 2.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain MSP1b PF03429.13 ORF56103 - 0.1 10.7 0.0 0.1 10.7 0.0 1.0 1 0 0 1 1 1 0 Major surface protein 1B GTP_EFTU PF00009.27 ORF55950 - 0.035 13.7 0.0 0.047 13.2 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain DUF2857 PF11198.8 ORF5539 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) SRRM_C PF15230.6 ORF54548 - 3.1 8.4 8.4 6.7 7.4 2.3 2.1 1 1 1 2 2 2 0 Serine/arginine repetitive matrix protein C-terminus DUF4110 PF13422.6 ORF54361 - 0.035 14.2 0.1 0.046 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4110) DUF2054 PF10218.9 ORF54254 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) Pex14_N PF04695.13 ORF53599 - 0.12 13.0 1.3 0.13 12.9 1.3 1.1 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region AAA_lid_7 PF17867.1 ORF53555 - 0.075 13.2 0.2 0.088 13.0 0.2 1.3 1 0 0 1 1 1 0 Midasin AAA lid domain GBP_C PF02841.14 ORF53482 - 0.0043 16.5 0.4 0.0043 16.5 0.4 1.1 1 0 0 1 1 1 1 Guanylate-binding protein, C-terminal domain DUF2054 PF10218.9 ORF53339 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) zf-C2H2 PF00096.26 ORF53171 - 2.4e-11 43.4 17.5 3.7e-07 30.2 3.2 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF53171 - 2.7e-10 40.2 13.3 4.8e-05 23.6 0.5 2.5 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF53171 - 3.5e-09 36.7 11.6 2e-05 25.1 1.8 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF53171 - 3e-06 27.1 13.0 4e-06 26.7 0.4 2.7 2 1 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF53171 - 1.4e-05 25.3 10.9 0.0026 18.0 0.8 2.4 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF53171 - 4.2e-05 23.8 8.6 0.00062 20.1 0.7 2.4 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-H2C2_5 PF13909.6 ORF53171 - 0.009 15.8 13.9 0.012 15.3 2.4 2.6 2 0 0 2 2 2 1 C2H2-type zinc-finger domain zf-C2H2_2 PF12756.7 ORF53171 - 0.026 14.9 0.5 0.026 14.9 0.5 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-BED PF02892.15 ORF53171 - 0.031 14.3 9.5 1.7 8.7 5.3 2.3 1 1 1 2 2 2 0 BED zinc finger zf-CHCC PF10276.9 ORF53171 - 0.036 14.1 1.7 1.3 9.1 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger domain VATC PF18716.1 ORF53171 - 0.06 13.2 5.7 2.9 7.8 0.1 2.6 2 1 0 2 2 2 0 Vms1-associating treble clef domain zf-C2H2_11 PF16622.5 ORF53171 - 0.06 13.1 6.4 1.7 8.5 0.2 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type Ribosomal_L37ae PF01780.19 ORF53171 - 0.11 12.6 8.2 0.74 9.9 7.9 1.9 1 1 1 2 2 2 0 Ribosomal L37ae protein family FYVE PF01363.21 ORF53171 - 0.24 11.5 10.7 0.73 10.0 0.6 2.1 1 1 1 2 2 2 0 FYVE zinc finger C5HCH PF17982.1 ORF53171 - 0.87 9.8 7.0 4.4 7.5 0.2 2.4 1 1 1 2 2 2 0 NSD Cys-His rich domain TTL PF03133.15 ORF52976 - 0.00061 19.0 0.0 0.00067 18.9 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family DUF4337 PF14235.6 ORF52959 - 6.6 6.8 7.3 8 6.6 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) MAP17 PF15807.5 ORF52959 - 8.4 6.6 7.0 8.6 6.6 7.0 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF2054 PF10218.9 ORF52518 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) DUF2878 PF11086.8 ORF52026 - 0.082 13.1 2.1 0.23 11.6 2.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2878) MgtE PF01769.16 ORF51124 - 0.085 13.2 10.5 0.089 13.2 10.5 1.1 1 0 0 1 1 1 0 Divalent cation transporter Ferlin_C PF16165.5 ORF51124 - 4.6 7.2 11.0 6.1 6.8 11.0 1.3 1 0 0 1 1 1 0 Ferlin C-terminus Corona_6B_7B PF03262.13 ORF50951 - 0.012 15.1 0.8 0.013 15.0 0.8 1.1 1 0 0 1 1 1 0 Coronavirus 6B/7B protein Bunya_RdRp PF04196.12 ORF50733 - 0.05 12.0 1.7 0.054 11.9 1.7 1.0 1 0 0 1 1 1 0 Bunyavirus RNA dependent RNA polymerase Vasohibin PF14822.6 ORF5014 - 0.03 13.6 0.2 0.033 13.4 0.2 1.0 1 0 0 1 1 1 0 Vasohibin zf-C2H2_assoc PF16606.5 ORF50086 - 0.0048 17.1 2.9 0.0056 16.9 2.9 1.1 1 0 0 1 1 1 1 Unstructured conserved, between two C2H2-type zinc-fingers DUF2838 PF10998.8 ORF49691 - 0.003 17.8 1.8 0.0034 17.6 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2838) DUF4762 PF15959.5 ORF49431 - 0.012 15.6 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4762) VASt PF16016.5 ORF49278 - 0.071 13.5 0.0 0.078 13.4 0.0 1.0 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain DUF3143 PF11341.8 ORF49238 - 0.033 14.5 0.0 0.043 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3143) Phlebovirus_G1 PF07243.11 ORF48709 - 0.18 10.1 0.6 0.21 9.9 0.6 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 ScsC_N PF18312.1 ORF48483 - 0.029 14.2 0.0 0.037 13.8 0.0 1.2 1 0 0 1 1 1 0 Copper resistance protein ScsC N-terminal domain YitT_membrane PF02588.15 ORF47855 - 0.011 15.1 0.2 0.012 15.0 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SICA_alpha PF12887.7 ORF47803 - 0.045 13.6 1.1 0.045 13.6 1.1 1.0 1 0 0 1 1 1 0 SICA extracellular alpha domain DUF4992 PF16383.5 ORF47550 - 0.41 10.1 3.2 0.5 9.9 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function LapA_dom PF06305.11 ORF47407 - 0.13 12.1 0.5 0.26 11.1 0.5 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF5463 PF17551.2 ORF45332 - 0.03 14.2 0.5 0.03 14.2 0.5 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5463) zf-CCCH_4 PF18044.1 ORF45086 - 0.045 13.6 0.3 0.078 12.8 0.3 1.4 1 0 0 1 1 1 0 CCCH-type zinc finger TPMT PF05724.11 ORF44908 - 1.1e-09 38.3 0.0 1.1e-09 38.2 0.0 1.0 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Fer4_6 PF12837.7 ORF4488 - 0.37 11.0 8.5 7 6.9 0.1 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Carla_C4 PF01623.17 ORF4488 - 3.1 7.8 11.3 0.98 9.4 2.4 2.4 1 1 2 3 3 3 0 Carlavirus putative nucleic acid binding protein DUF2054 PF10218.9 ORF44073 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) PspB PF06667.12 ORF44018 - 3.1e-32 110.4 0.5 3.4e-32 110.3 0.5 1.0 1 0 0 1 1 1 1 Phage shock protein B BatA PF07584.11 ORF44018 - 0.0032 17.8 1.0 0.0038 17.6 1.0 1.1 1 0 0 1 1 1 1 Aerotolerance regulator N-terminal DUF3886 PF13025.6 ORF44018 - 0.016 15.3 2.5 0.022 14.9 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3886) P22_AR_C PF10548.9 ORF44018 - 0.052 13.7 0.1 0.052 13.7 0.1 1.7 1 1 1 2 2 2 0 P22AR C-terminal domain YPEB PF14620.6 ORF44018 - 0.091 12.1 0.3 0.097 12.0 0.3 1.0 1 0 0 1 1 1 0 YpeB sporulation Peptidase_S49_N PF08496.10 ORF44018 - 0.098 12.7 0.0 0.11 12.6 0.0 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Cnd3 PF12719.7 ORF4400 - 0.008 15.4 0.3 0.0089 15.3 0.3 1.0 1 0 0 1 1 1 1 Nuclear condensing complex subunits, C-term domain Ibs_toxin PF13956.6 ORF43682 - 2e-10 40.4 6.8 3e-10 39.8 6.8 1.3 1 0 0 1 1 1 1 Toxin Ibs, type I toxin-antitoxin system DUF4992 PF16383.5 ORF43621 - 0.41 10.1 3.2 0.5 9.9 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function ATP_transf PF09830.9 ORF41706 - 0.028 14.6 0.0 0.034 14.3 0.0 1.1 1 0 0 1 1 1 0 ATP adenylyltransferase DUF2054 PF10218.9 ORF41701 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) Tna_leader PF08053.11 ORF41473 - 0.39 10.8 5.7 8.7 6.5 0.1 2.7 2 0 0 2 2 2 0 Tryptophanase operon leader peptide GIT_CC PF16559.5 ORF4146 - 0.018 14.9 0.2 0.026 14.4 0.2 1.3 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF4367 PF14285.6 ORF41458 - 0.15 12.5 3.7 0.16 12.4 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4367) B2 PF11473.8 ORF41410 - 0.091 12.6 0.1 0.24 11.2 0.0 1.7 2 0 0 2 2 2 0 RNA binding protein B2 Chromate_transp PF02417.15 ORF41061 - 3.5 7.7 6.8 4 7.5 6.8 1.1 1 0 0 1 1 1 0 Chromate transporter Hormone_5 PF00184.17 ORF40658 - 0.081 13.8 11.2 0.1 13.4 11.2 1.2 1 0 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain Spc7 PF08317.11 ORF40576 - 0.0056 15.6 9.2 0.0061 15.5 9.2 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein KxDL PF10241.9 ORF40576 - 0.0077 16.5 3.7 0.12 12.7 1.4 2.0 1 1 1 2 2 2 1 Uncharacterized conserved protein THOC7 PF05615.13 ORF40576 - 0.0077 16.5 8.6 0.012 15.9 8.6 1.4 1 1 0 1 1 1 1 Tho complex subunit 7 Strumpellin PF10266.9 ORF40576 - 0.012 13.4 3.5 0.012 13.3 3.5 1.0 1 0 0 1 1 1 0 Hereditary spastic paraplegia protein strumpellin Atg14 PF10186.9 ORF40576 - 0.021 13.9 6.1 0.023 13.8 6.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1664 PF07889.12 ORF40576 - 0.023 14.8 3.5 0.026 14.5 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) ApoLp-III PF07464.11 ORF40576 - 0.024 14.7 4.3 0.031 14.4 4.3 1.2 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DegQ PF08181.11 ORF40576 - 0.035 14.2 2.4 0.035 14.2 2.4 2.1 2 0 0 2 2 2 0 DegQ (SacQ) family Golgin_A5 PF09787.9 ORF40576 - 0.042 13.3 9.0 0.045 13.2 9.0 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF87 PF01935.17 ORF40576 - 0.082 13.0 3.9 0.083 13.0 3.9 1.0 1 0 0 1 1 1 0 Helicase HerA, central domain SWI-SNF_Ssr4 PF08549.10 ORF40576 - 0.14 10.8 3.4 0.13 10.9 3.4 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) CREPT PF16566.5 ORF40576 - 0.15 12.2 6.7 0.23 11.6 6.7 1.4 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour Histidinol_dh PF00815.20 ORF40576 - 0.2 10.6 2.8 0.21 10.5 2.8 1.0 1 0 0 1 1 1 0 Histidinol dehydrogenase Snapin_Pallidin PF14712.6 ORF40576 - 0.25 11.8 6.1 0.38 11.2 6.1 1.3 1 0 0 1 1 1 0 Snapin/Pallidin YtxH PF12732.7 ORF40576 - 0.43 11.1 2.9 1 10.0 2.9 1.7 1 1 0 1 1 1 0 YtxH-like protein FapA PF03961.13 ORF40576 - 0.56 8.7 7.4 0.6 8.7 7.4 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A HR1 PF02185.16 ORF40576 - 0.57 10.3 8.5 3.1 8.0 3.6 2.6 1 1 1 2 2 2 0 Hr1 repeat GrpE PF01025.19 ORF40576 - 0.88 9.2 9.8 7.4 6.2 9.8 1.9 1 1 0 1 1 1 0 GrpE TMPIT PF07851.13 ORF40576 - 0.99 8.6 6.7 1 8.6 6.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein Cgr1 PF03879.14 ORF40576 - 1.8 9.0 8.9 2.5 8.5 8.9 1.3 1 1 0 1 1 1 0 Cgr1 family Rad50_zn_hook PF04423.14 ORF40576 - 2.5 8.0 11.3 2.2 8.2 1.6 3.0 2 1 1 3 3 3 0 Rad50 zinc hook motif DUF4337 PF14235.6 ORF40576 - 3 7.9 6.5 3.5 7.7 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) MTBP_C PF14920.6 ORF40563 - 0.064 13.0 0.8 0.069 12.9 0.8 1.1 1 0 0 1 1 1 0 MDM2-binding Fer4_8 PF13183.6 ORF39004 - 0.048 14.1 8.7 0.08 13.4 8.7 1.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain DUF4606 PF15379.6 ORF38905 - 0.027 14.7 0.3 0.03 14.5 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4606) Defb50 PF17546.2 ORF37552 - 0.014 15.3 0.1 0.032 14.1 0.1 1.6 1 0 0 1 1 1 0 Beta defensin 50 C_tripleX PF02363.19 ORF36694 - 0.99 9.8 14.7 0.18 12.1 9.6 2.1 2 0 0 2 2 2 0 Cysteine rich repeat DUF1636 PF07845.11 ORF35576 - 0.066 13.7 0.1 0.069 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) DUF3333 PF11812.8 ORF35519 - 0.08 13.1 0.2 0.092 12.9 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) CBM32 PF18344.1 ORF35323 - 0.11 12.3 1.3 0.14 12.0 0.6 1.6 1 1 0 1 1 1 0 Carbohydrate binding module family 32 PsbX PF06596.11 ORF35239 - 0.1 12.6 0.9 3.4 7.8 0.3 2.2 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) DUF4037 PF13228.6 ORF34767 - 0.036 14.9 0.2 0.062 14.1 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4037) EF-hand_7 PF13499.6 ORF34682 - 1.1e-05 25.8 0.2 1.4e-05 25.5 0.2 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF34682 - 1.1e-05 25.2 0.2 1.7e-05 24.5 0.2 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF34682 - 0.00025 20.4 0.1 0.001 18.5 0.0 1.9 2 0 0 2 2 2 1 EF hand SPARC_Ca_bdg PF10591.9 ORF34682 - 0.00035 20.9 1.4 0.00041 20.6 1.4 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_6 PF13405.6 ORF34682 - 0.0034 17.2 0.1 0.068 13.1 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain HTH_12 PF08461.10 ORF34682 - 0.019 14.9 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain EF-hand_5 PF13202.6 ORF34682 - 0.033 13.7 0.1 0.13 11.8 0.0 1.9 2 0 0 2 2 2 0 EF hand zf-C3H2C3 PF17122.5 ORF34522 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF34522 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family YqgC PF17430.2 ORF3421 - 0.027 14.5 0.5 0.027 14.5 0.5 1.6 2 0 0 2 2 2 0 Uncharacterized YqgC-like HTH_35 PF13693.6 ORF34037 - 5.3e-23 80.9 0.1 6.1e-23 80.6 0.1 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding CBP PF12192.8 ORF32765 - 0.041 14.1 0.0 0.06 13.6 0.0 1.2 1 0 0 1 1 1 0 Fungal calcium binding protein DUF1233 PF06806.12 ORF3276 - 1.9e-20 72.3 0.1 2.4e-20 71.9 0.1 1.0 1 0 0 1 1 1 1 Putative excisionase (DUF1233) Foie-gras_1 PF11817.8 ORF32720 - 0.054 13.1 0.0 0.054 13.1 0.0 1.1 1 0 0 1 1 1 0 Foie gras liver health family 1 HTH_40 PF14493.6 ORF32587 - 0.089 13.3 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain MPS-4 PF17523.2 ORF31602 - 0.67 10.1 12.0 0.41 10.8 1.5 2.1 1 1 1 2 2 2 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 RRF PF01765.19 ORF31364 - 3e-05 24.0 2.6 3.2e-05 23.9 2.6 1.0 1 0 0 1 1 1 1 Ribosome recycling factor Casc1_N PF15927.5 ORF31364 - 0.0096 15.6 1.2 0.01 15.5 1.2 1.1 1 0 0 1 1 1 1 Cancer susceptibility candidate 1 N-terminus APT PF03440.14 ORF30660 - 0.18 11.8 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Aerolysin/Pertussis toxin (APT) domain CHZ PF09649.10 ORF30604 - 0.17 11.4 0.4 0.26 10.8 0.4 1.3 1 0 0 1 1 1 0 Histone chaperone domain CHZ PPR PF01535.20 ORF30498 - 0.019 15.2 3.8 0.12 12.7 0.1 2.7 2 0 0 2 2 2 0 PPR repeat XisH PF08814.10 ORF30286 - 0.035 14.2 0.1 0.038 14.2 0.1 1.1 1 0 0 1 1 1 0 XisH protein DUF2054 PF10218.9 ORF30191 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) E1-E2_ATPase PF00122.20 ORF30021 - 0.072 12.6 0.1 0.074 12.6 0.1 1.0 1 0 0 1 1 1 0 E1-E2 ATPase SERTA PF06031.13 ORF29992 - 0.12 12.1 0.3 0.33 10.7 0.0 1.9 2 1 0 2 2 2 0 SERTA motif Phage_holin_4_2 PF04020.13 ORF29929 - 0.021 15.5 2.5 0.029 15.0 2.5 1.2 1 0 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV PsbX PF06596.11 ORF29886 - 0.1 12.6 0.9 3.4 7.8 0.3 2.2 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) Herpes_UL16 PF03044.14 ORF29807 - 0.084 12.2 0.0 0.088 12.1 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family NHase_alpha PF02979.16 ORF28608 - 4.5e-17 62.0 0.0 5.1e-17 61.8 0.0 1.0 1 0 0 1 1 1 1 Nitrile hydratase, alpha chain Recombinase PF07508.13 ORF28608 - 0.071 13.5 0.0 0.087 13.2 0.0 1.1 1 0 0 1 1 1 0 Recombinase DUF148 PF02520.17 ORF28091 - 0.016 15.3 1.1 0.024 14.7 1.1 1.3 1 1 0 1 1 1 0 Domain of unknown function DUF148 PRD PF00874.20 ORF28091 - 0.03 14.6 0.3 0.035 14.4 0.3 1.1 1 0 0 1 1 1 0 PRD domain CobW_C PF07683.14 ORF27544 - 9.9e-09 35.0 0.0 1.2e-08 34.8 0.0 1.1 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain zf-like PF04071.12 ORF27415 - 0.79 9.7 12.3 1.1 9.2 12.3 1.3 1 1 0 1 1 1 0 Cysteine-rich small domain zf-C3H2C3 PF17122.5 ORF27388 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF27388 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family Flavodoxin_2 PF02525.17 ORF27264 - 1.5e-07 31.3 0.0 1.7e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Ribosomal_S17 PF00366.20 ORF25756 - 0.93 9.6 7.0 0.16 12.1 2.5 1.9 2 1 0 2 2 2 0 Ribosomal protein S17 CDC48_2 PF02933.17 ORF25025 - 0.008 15.9 0.0 0.0099 15.6 0.0 1.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 VDE PF07137.11 ORF24801 - 0.051 13.1 0.6 0.051 13.1 0.6 1.1 1 0 0 1 1 1 0 VDE lipocalin domain 3A PF00803.18 ORF24740 - 0.1 11.9 0.2 0.12 11.6 0.2 1.1 1 0 0 1 1 1 0 3A/RNA2 movement protein family DUF2054 PF10218.9 ORF2453 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) MR_MLE_C PF13378.6 ORF24465 - 0.13 11.8 0.6 0.14 11.7 0.6 1.0 1 0 0 1 1 1 0 Enolase C-terminal domain-like Ilar_coat PF01787.16 ORF24053 - 0.1 12.4 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Ilarvirus coat protein HA PF03457.14 ORF23609 - 0.031 14.6 0.0 0.042 14.2 0.0 1.2 1 0 0 1 1 1 0 Helicase associated domain DUF4710 PF15828.5 ORF23609 - 0.051 13.7 4.3 0.22 11.6 1.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4710) DUF1418 PF07214.12 ORF23448 - 0.14 12.1 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) bacHORMA_2 PF18173.1 ORF23235 - 0.056 13.3 0.0 0.077 12.8 0.0 1.3 1 1 0 1 1 1 0 Bacterial HORMA domain 2 TMEM37 PF15108.6 ORF23132 - 0.029 14.3 0.1 0.034 14.0 0.1 1.2 1 0 0 1 1 1 0 Voltage-dependent calcium channel gamma-like subunit protein family NifW PF03206.14 ORF22496 - 0.034 14.7 0.4 0.055 14.0 0.4 1.3 1 0 0 1 1 1 0 Nitrogen fixation protein NifW COX6C PF02937.15 ORF22496 - 1.1 9.4 4.8 10 6.3 0.2 2.1 1 1 1 2 2 2 0 Cytochrome c oxidase subunit VIc GPR15L PF15854.5 ORF20933 - 0.033 14.4 0.4 0.037 14.2 0.4 1.1 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 HCV_NS2 PF01538.18 ORF20606 - 0.026 14.2 1.2 0.027 14.2 1.2 1.0 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 zf-AD PF07776.15 ORF20606 - 0.12 12.7 7.0 0.15 12.3 7.0 1.2 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) WGR PF05406.15 ORF20168 - 0.078 13.0 0.0 0.09 12.8 0.0 1.1 1 0 0 1 1 1 0 WGR domain HMG_box_2 PF09011.10 ORF1976 - 0.038 14.6 0.1 0.045 14.4 0.1 1.2 1 0 0 1 1 1 0 HMG-box domain DUF2730 PF10805.8 ORF19611 - 0.059 13.5 0.1 0.084 13.0 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2730) Phage_fiber_C PF06820.12 ORF19577 - 0.094 13.1 0.1 0.17 12.3 0.1 1.4 1 1 0 1 1 1 0 Putative prophage tail fibre C-terminus Colipase PF01114.18 ORF18662 - 0.015 15.0 0.8 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 Colipase, N-terminal domain C_tripleX PF02363.19 ORF18046 - 0.99 9.8 14.7 0.18 12.1 9.6 2.1 2 0 0 2 2 2 0 Cysteine rich repeat CDC24_OB1 PF17246.2 ORF17731 - 0.067 13.3 0.2 0.079 13.1 0.2 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 1 DUF2116 PF09889.9 ORF17731 - 9.5 6.3 8.4 0.28 11.2 1.2 2.2 1 1 2 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) zf-C3H2C3 PF17122.5 ORF17354 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF17354 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family Nrf1_DNA-bind PF10491.9 ORF16941 - 0.13 12.0 0.9 0.15 11.8 0.9 1.1 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 VraX PF17412.2 ORF16191 - 0.0018 17.9 0.2 0.0024 17.5 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function C_tripleX PF02363.19 ORF152820 - 0.99 9.8 14.7 0.18 12.1 9.6 2.1 2 0 0 2 2 2 0 Cysteine rich repeat NDUF_B7 PF05676.13 ORF152030 - 1.7 8.4 8.3 0.14 11.9 1.8 2.2 2 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) RPAP2_Rtr1 PF04181.13 ORF151896 - 0.075 13.4 2.7 0.13 12.6 2.7 1.6 1 1 0 1 1 1 0 Rtr1/RPAP2 family COX2-transmemb PF09125.10 ORF151876 - 0.15 11.9 1.7 0.28 11.0 1.3 1.7 1 1 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane ADP_ribosyl_GH PF03747.14 ORF151314 - 0.00044 20.1 0.2 0.00057 19.7 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Keratin PF02422.16 ORF15118 - 0.064 13.0 0.0 0.13 11.9 0.0 1.6 1 1 1 2 2 2 0 Keratin Tudor_2 PF18104.1 ORF150954 - 0.17 11.6 0.4 0.66 9.7 0.1 1.9 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain MORN PF02493.20 ORF150806 - 1.4e-19 68.8 24.1 7.3e-08 31.9 2.0 4.1 4 0 0 4 4 4 4 MORN repeat Tudor_2 PF18104.1 ORF150806 - 0.044 13.5 4.5 2.7 7.8 0.3 2.6 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain Trehalose_PPase PF02358.16 ORF150604 - 0.091 11.9 0.0 0.091 11.9 0.0 1.1 1 0 0 1 1 1 0 Trehalose-phosphatase Spore_YtfJ PF09579.10 ORF15055 - 0.13 12.4 0.8 0.34 11.1 0.8 1.7 1 1 0 1 1 1 0 Sporulation protein YtfJ (Spore_YtfJ) zf-C3H2C3 PF17122.5 ORF148962 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF148962 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family ECSCR PF15820.5 ORF148701 - 0.35 10.7 3.7 0.4 10.5 3.7 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Phage_holin_3_6 PF07332.11 ORF148701 - 0.68 10.0 15.2 0.86 9.7 15.2 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3742 PF12553.8 ORF148701 - 0.88 9.7 4.7 1 9.5 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) DUF1251 PF06856.11 ORF148211 - 0.028 14.1 0.0 0.03 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1251) Phage_GPD PF05954.11 ORF148164 - 0.037 13.3 0.1 0.037 13.3 0.1 1.1 1 0 0 1 1 1 0 Phage late control gene D protein (GPD) Anoct_dimer PF16178.5 ORF148027 - 0.063 13.0 0.0 0.077 12.7 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain of Ca+-activated chloride-channel, anoctamin ShK PF01549.24 ORF147771 - 0.47 11.0 9.1 2.5 8.7 1.9 2.7 3 0 0 3 3 3 0 ShK domain-like Med19 PF10278.9 ORF147514 - 0.078 12.9 0.3 0.24 11.3 0.1 1.7 1 1 1 2 2 2 0 Mediator of RNA pol II transcription subunit 19 DUF1418 PF07214.12 ORF147179 - 2.8e-15 55.9 0.1 3.4e-15 55.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1418) Tetraspanin PF00335.20 ORF147179 - 0.035 13.8 0.0 0.04 13.6 0.0 1.1 1 0 0 1 1 1 0 Tetraspanin family DUF2054 PF10218.9 ORF146768 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) DHH PF01368.20 ORF145967 - 0.076 13.3 0.6 0.09 13.0 0.6 1.1 1 0 0 1 1 1 0 DHH family DUF5388 PF17363.2 ORF145881 - 0.0044 17.2 0.3 0.0067 16.6 0.3 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5388) LCD1 PF09798.9 ORF145495 - 0.24 9.9 8.7 0.27 9.7 8.7 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein Melittin PF01372.17 ORF14416 - 0.18 11.8 0.4 0.31 11.1 0.4 1.4 1 0 0 1 1 1 0 Melittin PS-DH PF14765.6 ORF144129 - 0.0077 15.5 0.0 0.0085 15.4 0.0 1.1 1 0 0 1 1 1 1 Polyketide synthase dehydratase NhaB PF06450.12 ORF143878 - 0.011 14.6 0.5 0.013 14.4 0.5 1.1 1 0 0 1 1 1 0 Bacterial Na+/H+ antiporter B (NhaB) Vsr PF03852.15 ORF142584 - 0.034 14.0 0.1 0.052 13.4 0.1 1.2 1 0 0 1 1 1 0 DNA mismatch endonuclease Vsr zf-C3H2C3 PF17122.5 ORF142514 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF142514 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family NYD-SP28 PF14772.6 ORF142297 - 0.00087 19.3 12.4 0.0016 18.4 12.4 1.6 1 1 0 1 1 1 1 Sperm tail Nup54 PF13874.6 ORF142297 - 0.026 14.6 8.4 0.028 14.5 8.4 1.0 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 COG6 PF06419.11 ORF142297 - 0.032 12.4 10.2 0.034 12.4 10.2 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 Bacillus_HBL PF05791.11 ORF142297 - 0.047 13.5 8.7 0.05 13.4 8.7 1.0 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) HAP1_N PF04849.13 ORF142297 - 0.17 11.1 13.2 0.19 10.9 13.2 1.0 1 0 0 1 1 1 0 HAP1 N-terminal conserved region HemX PF04375.14 ORF142297 - 0.46 9.7 8.3 0.47 9.7 8.3 1.0 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3552 PF12072.8 ORF142297 - 0.55 9.6 15.1 1.5 8.2 14.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3552) CENP-H PF05837.12 ORF142297 - 0.66 10.4 10.5 0.79 10.2 10.5 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Med9 PF07544.13 ORF142297 - 2.1 8.5 12.8 14 5.8 12.8 2.0 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 UPF0242 PF06785.11 ORF142297 - 2.1 8.4 15.2 2.2 8.4 15.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus OmpH PF03938.14 ORF142297 - 5.5 7.3 14.0 8.6 6.7 14.0 1.3 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) MRPL52 PF18699.1 ORF142297 - 6.6 7.0 11.4 7.6 6.8 10.9 1.4 1 1 0 1 1 1 0 Mitoribosomal protein mL52 Mem_trans PF03547.18 ORF142137 - 7.9e-12 44.3 3.6 8.8e-12 44.1 3.6 1.0 1 0 0 1 1 1 1 Membrane transport protein GBP_C PF02841.14 ORF14120 - 0.0073 15.7 0.3 0.0073 15.7 0.3 1.1 1 0 0 1 1 1 1 Guanylate-binding protein, C-terminal domain DUF5470 PF17564.2 ORF140971 - 0.11 12.7 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5470) Secretogranin_V PF05281.11 ORF140866 - 0.06 13.0 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 Neuroendocrine protein 7B2 precursor (Secretogranin V) Cyclin_C PF02984.19 ORF140381 - 0.075 13.1 0.1 0.075 13.1 0.1 1.3 1 1 0 1 1 1 0 Cyclin, C-terminal domain Syntaxin-5_N PF11416.8 ORF140371 - 0.48 9.7 0.1 0.48 9.7 0.1 1.8 2 0 0 2 2 2 0 Syntaxin-5 N-terminal, Sly1p-binding domain DUF5463 PF17551.2 ORF140018 - 0.03 14.2 0.5 0.03 14.2 0.5 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5463) TRM PF02005.16 ORF139640 - 7.5e-14 51.7 1.2 7.6e-14 51.7 1.2 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase AMOP PF03782.17 ORF139584 - 0.012 15.7 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 0 AMOP domain CNOT11 PF10155.9 ORF13958 - 0.026 14.7 0.6 0.031 14.4 0.6 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 Gsf2 PF11055.8 ORF13954 - 0.054 12.3 0.2 0.054 12.3 0.2 1.1 1 0 0 1 1 1 0 Glucose signalling factor 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks366.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks366.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks366.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks366.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ATP-synt_F PF01990.17 ORF138833 - 0.11 12.8 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 ATP synthase (F/14-kDa) subunit tRNA-synt_2b PF00587.25 ORF138723 - 0.036 14.1 0.0 0.04 13.9 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) DUF1636 PF07845.11 ORF138254 - 0.066 13.7 0.1 0.069 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) DUF2808 PF10989.8 ORF138184 - 0.0026 17.8 0.2 0.003 17.5 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2808) Colipase-like PF15083.6 ORF138141 - 0.08 13.1 3.7 0.096 12.8 3.7 1.2 1 0 0 1 1 1 0 Colipase-like DUF5547 PF17701.1 ORF138014 - 0.1 12.5 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Colipase_C PF02740.14 ORF137456 - 0.31 11.2 1.9 0.54 10.5 1.9 1.3 1 0 0 1 1 1 0 Colipase, C-terminal domain EF-hand_6 PF13405.6 ORF137343 - 7.7e-08 31.7 0.1 0.0049 16.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF137343 - 1.6e-05 24.1 0.0 0.11 12.1 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF137343 - 0.00031 21.1 0.1 0.029 14.8 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF137343 - 0.0035 16.8 0.1 0.99 9.0 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF137343 - 0.0094 15.8 0.1 0.48 10.3 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain pair Antimicrobial_6 PF08036.11 ORF137343 - 0.13 12.4 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Diapausin family of antimicrobial peptide DUF2207 PF09972.9 ORF13700 - 0.9 8.2 6.2 1 8.0 6.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Adipogenin PF15202.6 ORF13700 - 3.7 7.6 8.5 5 7.2 8.5 1.2 1 0 0 1 1 1 0 Adipogenin Pox_P35 PF03213.14 ORF136785 - 0.18 11.0 0.3 0.21 10.8 0.3 1.0 1 0 0 1 1 1 0 Poxvirus P35 protein zf-LITAF-like PF10601.9 ORF136785 - 0.69 10.2 5.2 0.51 10.6 4.0 1.4 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain DUF2873 PF11395.8 ORF136785 - 3.7 7.5 10.1 0.19 11.6 4.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) DUF4363 PF14276.6 ORF136054 - 0.048 13.8 0.3 0.088 12.9 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4363) Ski_Sno PF02437.17 ORF134989 - 0.019 14.7 4.6 0.031 14.0 4.6 1.4 1 1 0 1 1 1 0 SKI/SNO/DAC family zf-TRAF PF02176.18 ORF134989 - 0.031 15.0 15.1 0.031 15.0 15.1 2.1 1 1 1 2 2 2 0 TRAF-type zinc finger Integrase_H2C2 PF17921.1 ORF134989 - 0.53 10.4 10.6 0.17 12.0 4.2 2.2 1 1 1 2 2 2 0 Integrase zinc binding domain zf-C2H2_4 PF13894.6 ORF134989 - 4.9 8.3 11.5 4.2 8.5 2.4 3.0 2 1 0 2 2 2 0 C2H2-type zinc finger zf-BED PF02892.15 ORF134989 - 7.9 6.6 12.3 3.6 7.7 7.1 2.2 1 1 1 2 2 2 0 BED zinc finger CD20 PF04103.15 ORF133299 - 0.039 14.0 6.9 0.043 13.9 6.9 1.0 1 0 0 1 1 1 0 CD20-like family NID PF07292.13 ORF132884 - 0.12 13.0 0.0 0.15 12.8 0.0 1.2 1 0 0 1 1 1 0 Nmi/IFP 35 domain (NID) FAO_M PF16350.5 ORF132407 - 0.12 12.8 0.1 5.5 7.4 0.0 2.1 1 1 1 2 2 2 0 FAD dependent oxidoreductase central domain DUF2054 PF10218.9 ORF132181 - 0.019 15.1 2.5 0.023 14.8 2.5 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) Cys_rich_CWC PF14375.6 ORF131969 - 0.23 11.9 7.2 0.34 11.4 7.2 1.3 1 0 0 1 1 1 0 Cysteine-rich CWC FlaG PF03646.15 ORF131605 - 0.079 13.1 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 FlaG protein DUF4321 PF14209.6 ORF131542 - 0.055 13.3 1.7 1.3 8.9 0.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4321) PRT_C PF08372.10 ORF131542 - 0.13 12.0 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal DUF2982 PF11201.8 ORF13151 - 0.002 17.7 0.1 0.0022 17.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2982) DUF1658 PF07871.11 ORF130310 - 0.083 12.8 3.1 0.083 12.8 3.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) ATP_transf PF09830.9 ORF130306 - 2.4e-14 53.2 0.0 2.8e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 ATP adenylyltransferase Pox_Ag35 PF03286.14 ORF130296 - 0.04 13.7 0.2 0.044 13.6 0.2 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF2054 PF10218.9 ORF130272 - 0.013 15.6 2.2 0.014 15.5 2.2 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) DUF4716 PF15837.5 ORF130225 - 0.39 10.8 6.8 2.7 8.1 0.7 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4716) RuvX PF03652.15 ORF129943 - 3.5e-19 69.5 0.0 3.8e-19 69.4 0.0 1.0 1 0 0 1 1 1 1 Holliday junction resolvase DUF5470 PF17564.2 ORF129818 - 0.11 12.7 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5470) FAF PF11250.8 ORF129782 - 0.12 12.7 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 Fantastic Four meristem regulator HZS_alpha PF18582.1 ORF129469 - 0.42 11.1 4.1 0.99 9.9 3.5 1.7 1 1 1 2 2 2 0 Hydrazine synthase alpha subunit middle domain DUF2214 PF09980.9 ORF129071 - 9.6e-05 22.2 0.6 0.00015 21.6 0.6 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2214) Kelch_5 PF13854.6 ORF128780 - 0.00019 21.4 0.1 0.00026 20.9 0.1 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 ORF128780 - 0.00024 21.3 0.0 0.0003 21.0 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 ORF128780 - 0.002 18.1 0.0 0.0025 17.8 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain DUF1724 PF08350.10 ORF128780 - 0.024 14.7 0.0 0.03 14.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1724) Pmp3 PF01679.17 ORF12866 - 0.1 12.8 1.5 0.16 12.2 1.4 1.5 1 1 0 1 1 1 0 Proteolipid membrane potential modulator Cdc6_C PF09079.11 ORF128176 - 0.066 13.2 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain NDUF_B7 PF05676.13 ORF127469 - 1.7 8.4 8.3 0.14 11.9 1.8 2.2 2 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) zf-C2H2 PF00096.26 ORF127004 - 2.4e-11 43.4 17.5 3.7e-07 30.2 3.2 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF127004 - 2.7e-10 40.2 13.3 4.8e-05 23.6 0.5 2.5 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF127004 - 3.5e-09 36.7 11.6 2e-05 25.1 1.8 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF127004 - 3e-06 27.1 13.0 4e-06 26.7 0.4 2.7 2 1 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF127004 - 1.4e-05 25.3 10.9 0.0026 18.0 0.8 2.4 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF127004 - 4.2e-05 23.8 8.6 0.00062 20.1 0.7 2.4 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-H2C2_5 PF13909.6 ORF127004 - 0.009 15.8 13.9 0.012 15.3 2.4 2.6 2 0 0 2 2 2 1 C2H2-type zinc-finger domain zf-C2H2_2 PF12756.7 ORF127004 - 0.026 14.9 0.5 0.026 14.9 0.5 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-BED PF02892.15 ORF127004 - 0.031 14.3 9.5 1.7 8.7 5.3 2.3 1 1 1 2 2 2 0 BED zinc finger zf-CHCC PF10276.9 ORF127004 - 0.036 14.1 1.7 1.3 9.1 0.2 2.3 2 0 0 2 2 2 0 Zinc-finger domain VATC PF18716.1 ORF127004 - 0.06 13.2 5.7 2.9 7.8 0.1 2.6 2 1 0 2 2 2 0 Vms1-associating treble clef domain zf-C2H2_11 PF16622.5 ORF127004 - 0.06 13.1 6.4 1.7 8.5 0.2 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type Ribosomal_L37ae PF01780.19 ORF127004 - 0.11 12.6 8.2 0.74 9.9 7.9 1.9 1 1 1 2 2 2 0 Ribosomal L37ae protein family FYVE PF01363.21 ORF127004 - 0.24 11.5 10.7 0.73 10.0 0.6 2.1 1 1 1 2 2 2 0 FYVE zinc finger C5HCH PF17982.1 ORF127004 - 0.87 9.8 7.0 4.4 7.5 0.2 2.4 1 1 1 2 2 2 0 NSD Cys-His rich domain Pacifastin_I PF05375.13 ORF126914 - 0.0083 15.8 3.6 0.2 11.4 1.1 2.2 1 1 1 2 2 2 2 Pacifastin inhibitor (LCMII) DUF5090 PF17009.5 ORF125100 - 1.1 9.2 4.7 1.2 9.1 4.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Rubredoxin_2 PF18073.1 ORF124680 - 0.49 10.2 0.2 0.49 10.2 0.2 2.5 3 0 0 3 3 3 0 Rubredoxin metal binding domain DUF4684 PF15736.5 ORF124578 - 0.0037 16.0 1.0 0.0042 15.8 1.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4684) zf-C3H2C3 PF17122.5 ORF124224 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF124224 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family zf-C3H2C3 PF17122.5 ORF123400 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF123400 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family DUF3388 PF11868.8 ORF122915 - 0.16 11.3 0.1 0.16 11.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3388) PsbX PF06596.11 ORF122849 - 0.1 12.6 0.9 3.4 7.8 0.3 2.2 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) HYR PF02494.16 ORF12277 - 0.044 14.1 0.0 0.056 13.8 0.0 1.1 1 0 0 1 1 1 0 HYR domain DUF1340 PF07067.11 ORF122547 - 0.07 12.5 0.0 0.07 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1340) zf-C3H2C3 PF17122.5 ORF122436 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF122436 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family Bim_N PF06773.11 ORF122150 - 1.2 8.9 7.3 0.87 9.3 4.1 2.0 1 1 1 2 2 2 0 Bim protein N-terminus DUF29 PF01724.16 ORF121951 - 0.081 13.1 3.4 0.092 13.0 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF29 Consortin_C PF15281.6 ORF121951 - 0.089 12.8 0.6 0.13 12.3 0.6 1.3 1 0 0 1 1 1 0 Consortin C-terminus FAM199X PF15814.5 ORF121951 - 1.2 8.1 5.1 1.6 7.7 5.1 1.1 1 0 0 1 1 1 0 Protein family FAM199X zf_PR_Knuckle PF18445.1 ORF121909 - 0.035 13.9 3.1 0.062 13.1 3.1 1.5 1 0 0 1 1 1 0 PR zinc knuckle motif zf-C3H2C3 PF17122.5 ORF121812 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF121812 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family Cytochrom_B562 PF07361.11 ORF121730 - 1.8e-22 79.9 1.0 2e-22 79.8 1.0 1.0 1 0 0 1 1 1 1 Cytochrome b562 PSII_Pbs27 PF13326.6 ORF121730 - 0.037 14.3 0.1 0.039 14.3 0.1 1.0 1 0 0 1 1 1 0 Photosystem II Pbs27 PSCyt3 PF07627.11 ORF120803 - 0.33 11.2 1.8 3.5 8.0 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1588) DUF1378 PF07125.11 ORF120467 - 0.084 13.0 1.3 0.12 12.5 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) ASC PF00858.24 ORF120467 - 5 6.0 6.9 5.6 5.8 6.9 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel DUF2249 PF10006.9 ORF120372 - 0.048 13.5 0.1 0.072 13.0 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) DUF2054 PF10218.9 ORF120146 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) YkuD_2 PF13645.6 ORF119664 - 0.15 11.5 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 L,D-transpeptidase catalytic domain Tox-WTIP PF15654.6 ORF119303 - 0.045 14.2 0.7 0.059 13.8 0.7 1.2 1 0 0 1 1 1 0 Toxin with a conserved tryptophan and TIP tripeptide motif HZS_alpha PF18582.1 ORF119060 - 0.42 11.1 4.1 0.99 9.9 3.5 1.7 1 1 1 2 2 2 0 Hydrazine synthase alpha subunit middle domain DUF2054 PF10218.9 ORF119050 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) zf-CCCH_6 PF18585.1 ORF117722 - 0.091 12.7 2.8 0.25 11.3 2.8 1.8 1 1 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 NDUF_B7 PF05676.13 ORF117465 - 1.7 8.4 8.3 0.14 11.9 1.8 2.2 2 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) DUF2684 PF10885.8 ORF117156 - 0.053 13.6 0.9 0.07 13.3 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) COMM_domain PF07258.14 ORF117147 - 0.0043 17.1 0.2 0.0079 16.3 0.2 1.5 1 1 0 1 1 1 1 COMM domain Antimicrobial10 PF08105.11 ORF116937 - 0.47 10.6 0.3 0.47 10.6 0.3 1.5 2 0 0 2 2 2 0 Metchnikowin family hnRNP_Q_AcD PF18360.1 ORF116435 - 0.094 12.7 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain DegT_DnrJ_EryC1 PF01041.17 ORF116341 - 0.048 13.0 0.0 0.062 12.6 0.0 1.1 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family XRN_N PF03159.18 ORF11507 - 0.059 12.8 0.1 0.059 12.8 0.1 1.1 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus DUF1405 PF07187.11 ORF11501 - 0.078 13.0 0.3 0.25 11.3 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1405) DUF3392 PF11872.8 ORF11487 - 0.019 15.2 0.3 0.021 15.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3392) UCH_C PF18031.1 ORF114641 - 0.051 13.5 0.4 1.6 8.7 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolases DUF2661 PF10860.8 ORF114641 - 0.067 13.3 0.0 0.083 13.0 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2661) DUF1378 PF07125.11 ORF114566 - 0.084 13.0 1.3 0.12 12.5 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) ASC PF00858.24 ORF114566 - 5 6.0 6.9 5.6 5.8 6.9 1.1 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel NDUF_B7 PF05676.13 ORF114253 - 1.7 8.4 8.3 0.14 11.9 1.8 2.2 2 1 1 3 3 3 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Herpes_UL7 PF01677.16 ORF114159 - 0.1 12.3 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL7 like DUF1688 PF07958.11 ORF114159 - 0.13 11.0 0.0 0.14 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1688) SecY PF00344.20 ORF113947 - 9.3e-11 41.5 1.7 1.1e-10 41.3 1.7 1.1 1 0 0 1 1 1 1 SecY translocase DUF5079 PF16882.5 ORF113947 - 0.018 14.9 0.8 0.019 14.8 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5079) DUF485 PF04341.12 ORF113947 - 0.21 11.6 2.8 0.22 11.5 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF2603 PF10788.9 ORF113274 - 0.0028 17.7 1.6 0.0035 17.4 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2603) Leu_zip PF15294.6 ORF113274 - 0.012 15.1 5.1 0.015 14.9 5.1 1.0 1 0 0 1 1 1 0 Leucine zipper C_tripleX PF02363.19 ORF112890 - 0.99 9.8 14.7 0.18 12.1 9.6 2.1 2 0 0 2 2 2 0 Cysteine rich repeat DUF2054 PF10218.9 ORF111899 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) Hairy_orange PF07527.13 ORF111701 - 0.047 13.9 0.2 0.083 13.1 0.2 1.5 1 0 0 1 1 1 0 Hairy Orange Curlin_rpt PF07012.12 ORF111668 - 0.11 12.5 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 Curlin associated repeat KH_dom-like PF14714.6 ORF111264 - 0.0087 16.3 0.2 0.011 16.0 0.2 1.1 1 0 0 1 1 1 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FGFR3_TM PF18123.1 ORF111248 - 2.2 7.9 8.1 4.8 6.8 8.1 1.6 1 1 0 1 1 1 0 Fibroblast growth factor receptor 3 transmembrane domain VSP PF03302.13 ORF110827 - 9.9e-05 21.4 6.6 0.0001 21.3 6.6 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein CCER1 PF15482.6 ORF110072 - 0.012 15.5 4.9 0.012 15.5 4.9 1.4 1 1 1 2 2 2 0 Coiled-coil domain-containing glutamate-rich protein family 1 EIAV_GP90 PF00971.18 ORF109826 - 0.017 13.9 0.0 0.017 13.8 0.0 1.0 1 0 0 1 1 1 0 EIAV coat protein, gp90 DUF3545 PF12065.8 ORF109826 - 0.15 12.1 0.8 0.21 11.6 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3545) Defensin_beta PF00711.19 ORF109494 - 0.028 14.4 0.3 0.045 13.8 0.3 1.3 1 0 0 1 1 1 0 Beta defensin AAA_lid_3 PF17862.1 ORF109052 - 6.5e-07 29.1 0.0 9.7e-07 28.5 0.0 1.3 1 1 0 1 1 1 1 AAA+ lid domain Vps4_C PF09336.10 ORF109052 - 0.00026 20.9 0.0 0.0003 20.7 0.0 1.2 1 0 0 1 1 1 1 Vps4 C terminal oligomerisation domain DUF2054 PF10218.9 ORF108796 - 0.021 14.9 2.0 0.025 14.7 2.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2054) Sulfatase PF00884.23 ORF108265 - 0.15 11.5 0.4 0.16 11.3 0.4 1.0 1 0 0 1 1 1 0 Sulfatase zf-C3H2C3 PF17122.5 ORF107793 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF107793 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family Kunitz_BPTI PF00014.23 ORF107308 - 0.043 14.1 1.1 0.055 13.7 1.1 1.2 1 0 0 1 1 1 0 Kunitz/Bovine pancreatic trypsin inhibitor domain TIP_N PF12457.8 ORF10643 - 0.074 13.4 0.6 0.086 13.2 0.6 1.1 1 0 0 1 1 1 0 Tuftelin interacting protein N terminal Vac_Fusion PF02346.16 ORF106302 - 0.059 13.0 0.1 13 5.5 0.0 2.5 2 1 0 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 DUF1590 PF07629.11 ORF105464 - 0.0043 16.8 2.8 0.085 12.7 0.6 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF1590) LAGLIDADG_WhiA PF14527.6 ORF105332 - 0.039 14.0 0.3 0.052 13.6 0.3 1.2 1 0 0 1 1 1 0 WhiA LAGLIDADG-like domain CryBP1 PF07029.11 ORF105243 - 0.035 14.2 0.6 0.037 14.1 0.6 1.1 1 0 0 1 1 1 0 CryBP1 protein PAS_8 PF13188.7 ORF104989 - 0.18 11.9 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 PAS domain HgmA PF04209.13 ORF104821 - 0.19 10.4 0.0 0.22 10.2 0.0 1.0 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase zf-UBP PF02148.19 ORF104518 - 1.3 9.4 7.0 2.8 8.3 7.0 1.6 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein Lar_restr_allev PF14354.6 ORF104443 - 0.05 14.0 0.3 0.079 13.4 0.3 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar Nudix_N_2 PF14803.6 ORF104443 - 1.3 9.0 5.9 3.3 7.7 0.8 2.5 2 1 1 3 3 3 0 Nudix N-terminal DUF2799 PF10973.8 ORF103894 - 0.039 14.4 0.5 0.04 14.3 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2799) SCA7 PF08313.12 ORF103491 - 0.02 14.8 1.2 0.025 14.4 1.2 1.2 1 0 0 1 1 1 0 SCA7, zinc-binding domain zf-C3H2C3 PF17122.5 ORF103359 - 0.02 14.9 3.4 0.028 14.4 3.4 1.3 1 0 0 1 1 1 0 Zinc-finger HPIP PF15226.6 ORF103359 - 0.16 12.4 0.2 0.2 12.1 0.2 1.2 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family TMEM171 PF15471.6 ORF103102 - 0.062 12.3 0.5 0.08 11.9 0.2 1.4 1 1 0 1 1 1 0 Transmembrane protein family 171 DUF2418 PF10332.9 ORF102991 - 1.5 9.4 4.7 0.95 10.0 0.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2418) Tub PF01167.18 ORF102771 - 1e-08 35.3 0.0 1e-08 35.2 0.0 1.0 1 0 0 1 1 1 1 Tub family KAAG1 PF15354.6 ORF102744 - 0.031 14.8 0.2 0.034 14.7 0.2 1.1 1 0 0 1 1 1 0 Kidney-associated antigen 1 DUF5318 PF17249.2 ORF102744 - 0.098 12.4 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5318) FIT1_2 PF17357.2 ORF102744 - 0.11 12.7 0.3 0.13 12.4 0.3 1.1 1 0 0 1 1 1 0 Facilitor Of iron transport 1 and 2 DUF962 PF06127.11 ORF102535 - 0.21 11.7 4.4 0.2 11.8 1.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF962) Flavin_Reduct PF01613.18 ORF101601 - 7.9e-12 45.5 0.1 8.4e-12 45.4 0.1 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Arginase PF00491.21 ORF101601 - 0.16 11.4 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Arginase family ECSCR PF15820.5 ORF101254 - 0.35 10.7 3.7 0.4 10.5 3.7 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Phage_holin_3_6 PF07332.11 ORF101254 - 0.68 10.0 15.2 0.86 9.7 15.2 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3742 PF12553.8 ORF101254 - 0.88 9.7 4.7 1 9.5 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) DUF4605 PF15378.6 ORF10094 - 0.015 15.2 0.3 0.37 10.7 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4605) DUF2621 PF11084.8 ORF100647 - 0.087 12.8 0.2 0.13 12.2 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2621) Sina PF03145.16 ORF100293 - 0.16 11.9 0.5 0.2 11.6 0.5 1.1 1 0 0 1 1 1 0 Seven in absentia protein family ParBc PF02195.18 ORF100221 - 0.015 15.6 0.0 0.018 15.3 0.0 1.1 1 0 0 1 1 1 0 ParB-like nuclease domain Mago_nashi PF02792.14 NODE_72825_length_217_cov_0.818681_g64884_i0reverse_frame_1 - 0.064 13.4 0.1 0.071 13.2 0.1 1.0 1 0 0 1 1 1 0 Mago nashi protein cpYpsA PF12694.7 NODE_72824_length_217_cov_0.868132_g64883_i0forward_frame_1 - 0.091 12.5 0.0 0.1 12.4 0.0 1.0 1 0 0 1 1 1 0 Circularly permutated YpsA SLOG family CwfJ_C_1 PF04677.15 NODE_72819_length_217_cov_0.873626_g64878_i0forward_frame_1 - 1.7e-10 40.8 0.0 1.7e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 KNTase_C PF07827.11 NODE_72813_length_217_cov_0.879121_g64872_i0reverse_frame_1 - 0.032 14.0 0.0 0.035 13.9 0.0 1.0 1 0 0 1 1 1 0 KNTase C-terminal domain CMD PF02627.20 NODE_72811_length_217_cov_0.879121_g64870_i0reverse_frame_1 - 0.017 15.2 0.2 0.017 15.1 0.2 1.1 1 0 0 1 1 1 0 Carboxymuconolactone decarboxylase family Colicin-DNase PF12639.7 NODE_72811_length_217_cov_0.879121_g64870_i0reverse_frame_1 - 0.11 13.3 0.0 0.12 13.3 0.0 1.2 1 0 0 1 1 1 0 DNase/tRNase domain of colicin-like bacteriocin PLA2_inh PF02988.15 NODE_72800_length_217_cov_0.934066_g64859_i0forward_frame_1 - 0.0096 16.6 0.1 0.011 16.4 0.1 1.1 1 0 0 1 1 1 1 Phospholipase A2 inhibitor RasGEF_N_2 PF14663.6 NODE_72800_length_217_cov_0.934066_g64859_i0forward_frame_1 - 0.18 12.2 0.0 0.21 12.0 0.0 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Nse4-Nse3_bdg PF15412.6 NODE_72797_length_217_cov_0.978022_g64856_i0forward_frame_1 - 0.0099 16.0 0.1 0.021 14.9 0.0 1.6 2 1 0 2 2 2 1 Binding domain of Nse4/EID3 to Nse3-MAGE Toxin_14 PF07829.11 NODE_72791_length_217_cov_1.043956_g64850_i0forward_frame_1 - 0.093 12.7 2.9 0.22 11.5 2.9 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein TadE PF07811.12 NODE_72789_length_217_cov_1.071429_g64848_i0reverse_frame_1 - 2.9 8.2 6.3 4.8 7.6 1.5 2.1 2 0 0 2 2 2 0 TadE-like protein Viral_env_E26 PF11050.8 NODE_72788_length_217_cov_1.076923_g64847_i0forward_frame_1 - 0.07 12.5 0.2 0.075 12.4 0.2 1.0 1 0 0 1 1 1 0 Virus envelope protein E26 WD40 PF00400.32 NODE_72787_length_217_cov_1.082418_g64846_i0reverse_frame_1 - 6.7e-06 26.8 0.1 0.18 12.7 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat Roc PF08477.13 NODE_72784_length_217_cov_1.093407_g64843_i0reverse_frame_1 - 0.0018 18.5 0.0 0.0022 18.2 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 NODE_72784_length_217_cov_1.093407_g64843_i0reverse_frame_1 - 0.22 11.1 0.0 0.27 10.8 0.0 1.1 1 0 0 1 1 1 0 Ras family Androgen_recep PF02166.16 NODE_72780_length_217_cov_1.120879_g64839_i0reverse_frame_1 - 0.8 8.5 5.5 0.92 8.3 5.5 1.0 1 0 0 1 1 1 0 Androgen receptor Lactamase_B_4 PF13691.6 NODE_72779_length_217_cov_1.126374_g64838_i0reverse_frame_1 - 2.7e-11 43.0 0.1 3.4e-11 42.7 0.1 1.1 1 0 0 1 1 1 1 tRNase Z endonuclease Syndecan PF01034.20 NODE_72779_length_217_cov_1.126374_g64838_i0forward_frame_1 - 0.016 15.1 0.7 0.025 14.5 0.8 1.4 1 1 0 1 1 1 0 Syndecan domain SVM_signal PF12113.8 NODE_72779_length_217_cov_1.126374_g64838_i0forward_frame_1 - 5.3 7.0 7.9 12 5.8 7.9 1.7 1 1 0 1 1 1 0 SVM protein signal sequence Cuticle_2 PF08184.11 NODE_72775_length_217_cov_1.164835_g64834_i0reverse_frame_1 - 0.029 14.4 0.1 0.051 13.6 0.1 1.4 1 0 0 1 1 1 0 Cuticle protein 7 isoform family DUF3217 PF11506.8 NODE_72775_length_217_cov_1.164835_g64834_i0reverse_frame_1 - 0.039 13.9 0.3 0.06 13.3 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3217) Monellin PF09200.10 NODE_72775_length_217_cov_1.164835_g64834_i0reverse_frame_1 - 0.072 12.9 0.1 1.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Monellin NDC10_II PF16787.5 NODE_72770_length_217_cov_1.208791_g64829_i0reverse_frame_1 - 0.1 11.7 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit, domain 2 TGF_beta_GS PF08515.12 NODE_72760_length_217_cov_1.280220_g64819_i0forward_frame_1 - 0.61 9.6 0.1 0.61 9.6 0.1 2.4 1 1 1 2 2 2 0 Transforming growth factor beta type I GS-motif DUF4630 PF15443.6 NODE_72760_length_217_cov_1.280220_g64819_i0forward_frame_1 - 0.72 10.0 4.7 1.2 9.3 4.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4630) Cgr1 PF03879.14 NODE_72753_length_217_cov_1.313187_g64812_i0reverse_frame_1 - 0.0052 17.2 7.2 0.0059 17.0 7.2 1.1 1 0 0 1 1 1 1 Cgr1 family Herpes_UL82_83 PF05784.11 NODE_72753_length_217_cov_1.313187_g64812_i0reverse_frame_1 - 0.075 11.9 0.2 0.088 11.6 0.2 1.0 1 0 0 1 1 1 0 Betaherpesvirus UL82/83 protein N terminus DUF3630 PF12305.8 NODE_72749_length_217_cov_1.318681_g64808_i0reverse_frame_1 - 0.089 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3630) GGGtGRT PF14057.6 NODE_72747_length_217_cov_1.318681_g64806_i0forward_frame_1 - 0.039 12.9 0.6 0.045 12.7 0.6 1.0 1 0 0 1 1 1 0 GGGtGRT protein Aft1_HRA PF11786.8 NODE_72746_length_217_cov_1.318681_g64805_i0forward_frame_1 - 0.076 13.4 0.1 0.097 13.0 0.1 1.3 1 1 0 1 1 1 0 Aft1 HRA domain DUF2545 PF10810.8 NODE_72745_length_217_cov_1.318681_g64804_i0forward_frame_1 - 0.18 11.9 2.9 1.3 9.2 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2545) BLOC1_2 PF10046.9 NODE_72741_length_217_cov_1.324176_g64800_i0reverse_frame_1 - 0.011 16.0 0.3 0.014 15.7 0.3 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Atg31 PF09795.9 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_1 - 0.016 15.2 1.8 0.017 15.2 1.5 1.3 1 1 0 1 1 1 0 Autophagy-related protein 31 Papo_T_antigen PF02380.15 NODE_72733_length_217_cov_1.373626_g64792_i0reverse_frame_1 - 1 9.5 8.0 0.078 13.1 3.7 1.4 2 0 0 2 2 2 0 T-antigen specific domain IQ PF00612.27 NODE_72730_length_217_cov_1.384615_g64789_i0reverse_frame_1 - 0.036 13.9 0.1 0.036 13.9 0.1 3.3 3 1 0 3 3 3 0 IQ calmodulin-binding motif MBA1 PF07961.11 NODE_72730_length_217_cov_1.384615_g64789_i0reverse_frame_1 - 0.077 12.0 1.0 0.087 11.9 1.0 1.1 1 0 0 1 1 1 0 MBA1-like protein FGAR-AT_N PF18076.1 NODE_72717_length_217_cov_1.478022_g64776_i0forward_frame_1 - 0.025 14.6 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Formylglycinamide ribonucleotide amidotransferase N-terminal LSM_int_assoc PF16605.5 NODE_72715_length_217_cov_1.489011_g64774_i0forward_frame_1 - 0.16 12.1 1.5 0.23 11.6 0.9 1.5 1 1 0 1 1 1 0 LSM-interacting associated unstructured NODP PF07684.12 NODE_72710_length_217_cov_1.538462_g64769_i0reverse_frame_1 - 4.5 7.5 6.0 27 5.0 6.0 2.0 1 1 0 1 1 1 0 NOTCH protein Spt20 PF12090.8 NODE_72710_length_217_cov_1.538462_g64769_i0forward_frame_1 - 4.9 6.7 12.5 5.9 6.4 12.5 1.0 1 0 0 1 1 1 0 Spt20 family Wzy_C_2 PF11846.8 NODE_72703_length_217_cov_1.560440_g64762_i0forward_frame_1 - 0.12 12.3 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal Peptidase_S9_N PF02897.15 NODE_72700_length_217_cov_1.587912_g64759_i0forward_frame_1 - 0.16 10.7 0.2 0.17 10.7 0.2 1.0 1 0 0 1 1 1 0 Prolyl oligopeptidase, N-terminal beta-propeller domain MORN PF02493.20 NODE_72693_length_217_cov_1.642857_g64752_i0reverse_frame_1 - 0.00017 21.2 0.5 0.0004 20.1 0.5 1.6 1 0 0 1 1 1 1 MORN repeat Kinesin PF00225.23 NODE_72687_length_217_cov_1.708791_g64746_i0reverse_frame_1 - 9.3e-09 34.6 0.0 1e-08 34.5 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_72687_length_217_cov_1.708791_g64746_i0reverse_frame_1 - 0.0039 17.1 0.0 0.0061 16.5 0.0 1.3 1 0 0 1 1 1 1 Microtubule binding Metallophos PF00149.28 NODE_72685_length_217_cov_1.719780_g64744_i0forward_frame_1 - 0.063 13.8 0.0 0.074 13.5 0.0 1.0 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase DsrD PF08679.11 NODE_72684_length_217_cov_1.725275_g64743_i0reverse_frame_1 - 0.18 12.1 0.2 9.5 6.6 0.0 2.1 2 0 0 2 2 2 0 Dissimilatory sulfite reductase D (DsrD) zf-C4_Topoisom PF01396.19 NODE_72676_length_217_cov_1.752747_g64735_i0forward_frame_1 - 0.0088 15.8 2.1 0.018 14.8 2.1 1.7 1 1 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger DUF1673 PF07895.11 NODE_72670_length_217_cov_1.752747_g64729_i0reverse_frame_1 - 0.05 13.3 2.2 0.054 13.2 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) Tmemb_9 PF05434.11 NODE_72670_length_217_cov_1.752747_g64729_i0reverse_frame_1 - 0.3 11.0 1.2 0.47 10.4 1.2 1.3 1 0 0 1 1 1 0 TMEM9 PhoQ_Sensor PF08918.10 NODE_72668_length_217_cov_1.758242_g64727_i0forward_frame_1 - 0.068 13.0 0.0 0.079 12.8 0.0 1.1 1 0 0 1 1 1 0 PhoQ Sensor Sclerostin PF05463.11 NODE_72666_length_217_cov_1.758242_g64725_i0forward_frame_1 - 0.34 10.6 4.7 0.59 9.8 4.7 1.4 1 1 0 1 1 1 0 Sclerostin (SOST) TIL PF01826.17 NODE_72660_length_217_cov_1.846154_g64719_i0reverse_frame_1 - 0.0042 17.3 2.6 0.0054 17.0 2.6 1.3 1 0 0 1 1 1 1 Trypsin Inhibitor like cysteine rich domain cEGF PF12662.7 NODE_72660_length_217_cov_1.846154_g64719_i0reverse_frame_1 - 0.2 11.6 2.8 0.49 10.4 2.8 1.7 1 1 0 1 1 1 0 Complement Clr-like EGF-like Med30 PF11315.8 NODE_72657_length_217_cov_1.884615_g64716_i0forward_frame_1 - 0.018 15.3 0.9 0.02 15.1 0.9 1.0 1 0 0 1 1 1 0 Mediator complex subunit 30 Baculo_gp64 PF03273.13 NODE_72649_length_217_cov_1.928571_g64708_i0forward_frame_1 - 0.0089 14.9 0.9 0.0094 14.8 0.9 1.0 1 0 0 1 1 1 1 Baculovirus gp64 envelope glycoprotein family KxDL PF10241.9 NODE_72649_length_217_cov_1.928571_g64708_i0forward_frame_1 - 0.045 14.0 0.5 0.061 13.6 0.5 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein Ribosomal_L44 PF00935.19 NODE_72646_length_217_cov_1.967033_g64705_i0reverse_frame_1 - 2.9 8.5 7.4 5.8 7.5 2.7 2.1 1 1 1 2 2 2 0 Ribosomal protein L44 OapA_N PF08525.11 NODE_72645_length_217_cov_1.967033_g64704_i0reverse_frame_1 - 0.063 13.2 0.6 8 6.5 0.2 2.5 2 0 0 2 2 2 0 Opacity-associated protein A N-terminal motif UPF0014 PF03649.13 NODE_72643_length_217_cov_2.005495_g64702_i0forward_frame_1 - 0.0066 15.8 1.2 0.0078 15.6 1.2 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0014) TMEM125 PF15109.6 NODE_72643_length_217_cov_2.005495_g64702_i0forward_frame_1 - 0.043 14.1 0.4 0.061 13.7 0.2 1.4 1 1 0 1 1 1 0 TMEM125 protein family DUF1987 PF09345.10 NODE_72639_length_217_cov_2.054945_g64698_i0reverse_frame_1 - 0.12 12.1 0.2 0.13 12.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) CDC27 PF09507.10 NODE_72637_length_217_cov_2.065934_g64696_i0reverse_frame_1 - 3.4 7.0 7.1 3.8 6.8 7.1 1.0 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 AA_permease_C PF13906.6 NODE_72634_length_217_cov_2.076923_g64693_i0reverse_frame_1 - 0.049 13.7 0.5 0.3 11.2 0.1 2.1 2 0 0 2 2 2 0 C-terminus of AA_permease PKD_channel PF08016.12 NODE_72632_length_217_cov_2.104396_g64691_i0reverse_frame_1 - 0.048 12.3 0.0 0.054 12.2 0.0 1.1 1 0 0 1 1 1 0 Polycystin cation channel Perm-CXXC PF15629.6 NODE_72632_length_217_cov_2.104396_g64691_i0forward_frame_1 - 0.065 13.5 1.6 0.1 12.9 1.6 1.3 1 0 0 1 1 1 0 Permuted single zf-CXXC unit T4-Gluco-transf PF09198.10 NODE_72631_length_217_cov_2.115385_g64690_i0reverse_frame_1 - 0.19 11.3 0.6 1.1 8.9 0.6 2.1 1 1 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase DUF2594 PF10769.9 NODE_72631_length_217_cov_2.115385_g64690_i0forward_frame_1 - 0.02 14.9 0.3 0.024 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2594) PNRC PF15365.6 NODE_72621_length_217_cov_2.192308_g64680_i0forward_frame_1 - 0.11 12.4 0.5 0.22 11.4 0.5 1.5 1 0 0 1 1 1 0 Proline-rich nuclear receptor coactivator motif RIBIOP_C PF04950.12 NODE_72620_length_217_cov_2.203297_g64679_i0reverse_frame_1 - 2.8e-07 30.2 0.0 3e-07 30.2 0.0 1.0 1 0 0 1 1 1 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal DUF2933 PF11666.8 NODE_72619_length_217_cov_2.302198_g64678_i0forward_frame_1 - 0.18 11.9 0.2 0.73 9.9 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2933) DUF1656 PF07869.12 NODE_72618_length_217_cov_2.307692_g64677_i0reverse_frame_1 - 0.0095 15.9 1.3 0.014 15.4 1.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1656) Peptidase_C41 PF05417.11 NODE_72611_length_217_cov_2.406593_g64670_i0reverse_frame_1 - 0.0028 17.5 0.1 0.0029 17.4 0.1 1.1 1 0 0 1 1 1 1 Hepatitis E cysteine protease zf-C2H2_8 PF15909.5 NODE_72611_length_217_cov_2.406593_g64670_i0reverse_frame_1 - 0.012 15.9 0.2 0.014 15.6 0.2 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon Glyco_transf_9 PF01075.17 NODE_72607_length_217_cov_2.478022_g64666_i0forward_frame_1 - 1.5e-09 37.5 0.0 1.6e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 9 (heptosyltransferase) Aa_trans PF01490.18 NODE_72604_length_217_cov_2.516484_g64663_i0reverse_frame_1 - 0.00038 19.3 0.4 0.0004 19.2 0.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 NODE_72604_length_217_cov_2.516484_g64663_i0reverse_frame_1 - 0.028 13.5 0.2 0.028 13.5 0.2 1.0 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family DUF3188 PF11384.8 NODE_72603_length_217_cov_2.521978_g64662_i0forward_frame_1 - 0.046 13.4 0.1 0.066 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3188) EVI2A PF05399.11 NODE_72602_length_217_cov_2.538462_g64661_i0reverse_frame_1 - 0.26 10.8 1.4 0.45 10.1 1.4 1.3 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) PAN_3 PF08277.12 NODE_72597_length_217_cov_2.620879_g64656_i0reverse_frame_1 - 0.12 12.2 2.8 0.14 12.0 1.5 1.6 1 1 1 2 2 2 0 PAN-like domain PAN_4 PF14295.6 NODE_72597_length_217_cov_2.620879_g64656_i0reverse_frame_1 - 7 6.7 10.4 12 5.9 8.6 2.4 1 1 1 2 2 2 0 PAN domain Glyco_hydro_80 PF13647.6 NODE_72595_length_217_cov_2.626374_g64654_i0reverse_frame_1 - 0.061 12.8 0.0 0.066 12.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A DUF4714 PF15833.5 NODE_72593_length_217_cov_2.736264_g64652_i0reverse_frame_1 - 0.012 15.6 0.1 0.013 15.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) HTH_psq PF05225.16 NODE_72588_length_217_cov_2.780220_g64647_i0reverse_frame_1 - 0.11 12.3 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 helix-turn-helix, Psq domain Mtp PF03821.16 NODE_72583_length_217_cov_2.961538_g64642_i0forward_frame_1 - 0.014 15.0 0.8 0.016 14.8 0.8 1.2 1 0 0 1 1 1 0 Golgi 4-transmembrane spanning transporter DUF5350 PF17299.2 NODE_72582_length_217_cov_2.961538_g64641_i0forward_frame_1 - 0.23 12.0 0.0 0.3 11.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5350) Toxin_13 PF07822.11 NODE_72579_length_217_cov_3.098901_g64638_i0reverse_frame_1 - 0.011 15.8 0.7 0.022 14.9 0.7 1.5 1 0 0 1 1 1 0 Neurotoxin B-IV-like protein OKR_DC_1 PF01276.20 NODE_72578_length_217_cov_3.098901_g64637_i0forward_frame_1 - 1.6e-22 79.8 0.3 1.8e-22 79.7 0.3 1.0 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Sugar_tr PF00083.24 NODE_72574_length_217_cov_3.335165_g64633_i0forward_frame_1 - 0.17 10.7 4.4 0.18 10.6 4.4 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter CK_II_beta PF01214.18 NODE_72572_length_217_cov_3.351648_g64631_i0reverse_frame_1 - 0.04 13.7 0.1 0.048 13.5 0.1 1.1 1 0 0 1 1 1 0 Casein kinase II regulatory subunit AhpC-TSA PF00578.21 NODE_72572_length_217_cov_3.351648_g64631_i0forward_frame_1 - 1.4 8.9 4.3 0.2 11.6 0.5 1.5 2 0 0 2 2 2 0 AhpC/TSA family KH_4 PF13083.6 NODE_72571_length_217_cov_3.423077_g64630_i0reverse_frame_1 - 0.051 13.4 0.0 0.23 11.4 0.1 1.8 2 0 0 2 2 2 0 KH domain Toxin_14 PF07829.11 NODE_72570_length_217_cov_3.461538_g64629_i0reverse_frame_1 - 0.23 11.4 4.7 0.38 10.7 4.7 1.3 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein Bombesin PF02044.17 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_1 - 0.041 14.0 0.2 0.078 13.1 0.2 1.5 1 0 0 1 1 1 0 Bombesin-like peptide Peptidase_S78_2 PF14550.6 NODE_72568_length_217_cov_3.516484_g64627_i0reverse_frame_1 - 0.078 13.1 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 Putative phage serine protease XkdF AmoC PF04896.12 NODE_72564_length_217_cov_4.324176_g64623_i0reverse_frame_1 - 0.082 12.2 0.3 0.086 12.1 0.3 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C DUF743 PF05332.11 NODE_72563_length_217_cov_4.950549_g64622_i0reverse_frame_1 - 0.061 13.4 0.1 0.069 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF743) ACP_PD PF04336.12 NODE_72559_length_217_cov_8.906593_g64618_i0forward_frame_1 - 0.046 14.1 0.0 0.052 14.0 0.0 1.1 1 0 0 1 1 1 0 Acyl carrier protein phosphodiesterase TSGP1 PF07771.11 NODE_72557_length_217_cov_22.285714_g64616_i0forward_frame_1 - 0.0024 18.0 0.0 0.003 17.7 0.0 1.1 1 0 0 1 1 1 1 Tick salivary peptide group 1 Rota_NS6 PF04866.12 NODE_72544_length_217_cov_35.197802_g64603_i0forward_frame_1 - 0.071 13.3 0.0 0.078 13.2 0.0 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 6 META PF03724.16 NODE_72543_length_217_cov_37.609890_g64602_i0reverse_frame_1 - 0.023 14.6 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 META domain SRP14 PF02290.15 NODE_72541_length_217_cov_38.648352_g64600_i0reverse_frame_1 - 4.2e-10 39.8 0.0 4.2e-10 39.8 0.0 1.6 2 0 0 2 2 2 1 Signal recognition particle 14kD protein AKAP7_RIRII_bdg PF10470.9 NODE_72525_length_217_cov_50.560440_g64584_i0forward_frame_1 - 0.096 12.8 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 PKA-RI-RII subunit binding domain of A-kinase anchor protein EMC3_TMCO1 PF01956.16 NODE_72524_length_217_cov_50.972527_g64583_i0reverse_frame_1 - 6.2 6.5 10.1 7 6.3 10.1 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like GST_C_2 PF13410.6 NODE_72512_length_217_cov_69.835165_g64571_i0forward_frame_1 - 0.085 12.9 0.0 0.096 12.7 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain LRR_4 PF12799.7 NODE_72502_length_217_cov_98.670330_g64561_i0forward_frame_1 - 0.05 14.1 0.2 0.18 12.3 0.1 1.9 1 1 1 2 2 2 0 Leucine Rich repeats (2 copies) YMF19 PF02326.15 NODE_72500_length_217_cov_112.719780_g64559_i0reverse_frame_1 - 0.014 16.2 1.6 0.015 16.1 1.6 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 Amnionless PF14828.6 NODE_72498_length_217_cov_123.368132_g64557_i0forward_frame_1 - 0.12 11.2 1.1 0.13 11.1 1.1 1.0 1 0 0 1 1 1 0 Amnionless NapE PF06796.11 NODE_72486_length_217_cov_327.467033_g64545_i0reverse_frame_1 - 0.16 11.5 0.5 0.22 11.0 0.5 1.3 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE Glycolytic PF00274.19 NODE_72484_length_217_cov_9919.653846_g64543_i0forward_frame_1 - 1.7e-21 76.4 0.0 1.8e-21 76.3 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I YfiO PF13525.6 NODE_72484_length_217_cov_9919.653846_g64543_i0forward_frame_1 - 0.15 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Outer membrane lipoprotein Harakiri PF15196.6 NODE_72479_length_218_cov_0.868852_g64538_i0forward_frame_1 - 0.035 14.6 0.1 0.042 14.3 0.1 1.1 1 0 0 1 1 1 0 Activator of apoptosis harakiri GnHR_trans PF12369.8 NODE_72473_length_218_cov_0.874317_g64532_i0reverse_frame_1 - 0.02 15.7 0.0 0.026 15.3 0.0 1.4 1 1 0 1 1 1 0 Gonadotropin hormone receptor transmembrane region GcnA_N PF18229.1 NODE_72472_length_218_cov_0.874317_g64531_i0reverse_frame_1 - 0.02 14.9 0.0 0.022 14.8 0.0 1.1 1 0 0 1 1 1 0 N-acetyl-beta-D-glucosaminidase N-terminal domain TRAPP PF04051.16 NODE_72472_length_218_cov_0.874317_g64531_i0reverse_frame_1 - 0.15 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Transport protein particle (TRAPP) component SelP_N PF04592.14 NODE_72471_length_218_cov_0.874317_g64530_i0forward_frame_1 - 0.23 10.8 10.7 0.26 10.7 10.7 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region WBP-1 PF11669.8 NODE_72471_length_218_cov_0.874317_g64530_i0forward_frame_1 - 4.9 7.9 8.1 12 6.5 8.1 1.7 1 1 0 1 1 1 0 WW domain-binding protein 1 ADH_N PF08240.12 NODE_72468_length_218_cov_0.874317_g64527_i0reverse_frame_1 - 0.09 12.7 0.3 0.1 12.5 0.3 1.1 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain Gpi16 PF04113.14 NODE_72467_length_218_cov_0.874317_g64526_i0forward_frame_1 - 0.078 11.4 0.0 0.078 11.4 0.0 1.1 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component His_Phos_1 PF00300.22 NODE_72466_length_218_cov_0.874317_g64525_i0forward_frame_1 - 0.00054 19.7 0.0 0.00054 19.7 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DUF4833 PF16117.5 NODE_72466_length_218_cov_0.874317_g64525_i0forward_frame_1 - 0.052 13.6 0.1 0.065 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4833) DUF3263 PF11662.8 NODE_72465_length_218_cov_0.874317_g64524_i0reverse_frame_1 - 0.086 12.7 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3263) DUF3804 PF12707.7 NODE_72449_length_218_cov_1.081967_g64508_i0forward_frame_1 - 0.049 13.4 0.3 0.051 13.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3804) DUF1622 PF07784.11 NODE_72441_length_218_cov_1.169399_g64500_i0forward_frame_1 - 0.11 12.5 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1622) AflR PF08493.10 NODE_72432_length_218_cov_1.245902_g64491_i0reverse_frame_1 - 0.094 12.2 3.0 0.12 11.9 3.0 1.0 1 0 0 1 1 1 0 Aflatoxin regulatory protein DUF1075 PF06388.11 NODE_72430_length_218_cov_1.256831_g64489_i0reverse_frame_1 - 0.0045 17.0 0.1 0.005 16.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1075) UPF0220 PF05255.11 NODE_72430_length_218_cov_1.256831_g64489_i0reverse_frame_1 - 0.015 14.8 0.0 0.017 14.7 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks367.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks367.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks367.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks367.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RNase_H PF00075.24 NODE_72421_length_218_cov_1.300546_g64480_i0forward_frame_1 - 2.4e-05 24.6 0.0 3.1e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 RNase H FUSC_2 PF13515.6 NODE_72419_length_218_cov_1.300546_g64478_i0reverse_frame_1 - 0.097 12.8 0.3 0.12 12.4 0.3 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein-like LSM_int_assoc PF16605.5 NODE_72419_length_218_cov_1.300546_g64478_i0forward_frame_1 - 0.22 11.7 2.3 0.18 11.9 0.9 1.7 1 1 1 2 2 2 0 LSM-interacting associated unstructured Leader_CPA1 PF08252.11 NODE_72418_length_218_cov_1.300546_g64477_i0forward_frame_1 - 0.085 12.3 0.1 0.16 11.4 0.1 1.4 1 0 0 1 1 1 0 arg-2/CPA1 leader peptide SirB PF04247.12 NODE_72417_length_218_cov_1.300546_g64476_i0reverse_frame_1 - 0.22 11.6 9.6 0.27 11.3 9.6 1.1 1 0 0 1 1 1 0 Invasion gene expression up-regulator, SirB UL2 PF08196.11 NODE_72391_length_218_cov_1.333333_g64450_i0forward_frame_1 - 0.17 11.9 0.9 0.2 11.6 0.6 1.4 1 1 0 1 1 1 0 UL2 protein DUF5359 PF17313.2 NODE_72391_length_218_cov_1.333333_g64450_i0forward_frame_1 - 5.4 7.1 10.7 8.7 6.4 0.8 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5359) Bap31 PF05529.12 NODE_72390_length_218_cov_1.360656_g64449_i0forward_frame_1 - 0.11 12.4 0.0 0.13 12.1 0.0 1.0 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region zf-C2H2_3 PF13878.6 NODE_72382_length_218_cov_1.404372_g64441_i0reverse_frame_1 - 0.039 13.8 0.5 0.068 13.0 0.5 1.4 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO CTX_RstB PF07459.11 NODE_72382_length_218_cov_1.404372_g64441_i0reverse_frame_1 - 0.06 13.6 0.0 0.068 13.4 0.0 1.1 1 0 0 1 1 1 0 CTX phage RstB protein S_100 PF01023.19 NODE_72379_length_218_cov_1.426230_g64438_i0forward_frame_1 - 0.004 16.8 1.7 0.052 13.3 0.2 2.1 2 0 0 2 2 2 2 S-100/ICaBP type calcium binding domain DUF5329 PF17263.2 NODE_72368_length_218_cov_1.502732_g64427_i0forward_frame_1 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5329) SWC7 PF17330.2 NODE_72361_length_218_cov_1.530055_g64420_i0forward_frame_1 - 0.088 12.9 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 SWR1 chromatin-remodelling complex, sub-unit Swc7 DUF3973 PF13119.6 NODE_72360_length_218_cov_1.530055_g64419_i0reverse_frame_1 - 0.2 11.8 0.0 0.44 10.7 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3973) zf-TRAF PF02176.18 NODE_72359_length_218_cov_1.530055_g64418_i0reverse_frame_1 - 0.025 15.3 8.8 0.042 14.5 8.8 1.5 1 1 0 1 1 1 0 TRAF-type zinc finger MOZ_SAS PF01853.18 NODE_72357_length_218_cov_1.530055_g64416_i0forward_frame_1 - 0.021 14.5 0.2 0.022 14.4 0.2 1.1 1 0 0 1 1 1 0 MOZ/SAS family SCAB_CC PF16712.5 NODE_72357_length_218_cov_1.530055_g64416_i0forward_frame_1 - 0.086 12.7 0.1 0.099 12.5 0.1 1.0 1 0 0 1 1 1 0 Coiled-coil regions of plant-specific actin-binding protein ETRAMP PF09716.10 NODE_72351_length_218_cov_1.562842_g64410_i0reverse_frame_1 - 0.044 13.9 2.2 0.055 13.5 2.2 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Tricho_coat PF05892.11 NODE_72351_length_218_cov_1.562842_g64410_i0forward_frame_1 - 0.087 12.6 0.0 0.091 12.5 0.0 1.1 1 0 0 1 1 1 0 Trichovirus coat protein DUF3452 PF11934.8 NODE_72350_length_218_cov_1.568306_g64409_i0reverse_frame_1 - 0.089 12.3 0.9 0.78 9.3 0.8 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF3452) GPR15L PF15854.5 NODE_72346_length_218_cov_1.628415_g64405_i0forward_frame_1 - 8.5 6.7 10.4 3.5 7.9 8.4 1.4 1 1 0 1 1 1 0 G-protein coupled receptor ligand 15 DUF865 PF05906.11 NODE_72341_length_218_cov_1.644809_g64400_i0forward_frame_1 - 0.012 15.4 3.0 0.033 14.0 3.0 1.8 1 0 0 1 1 1 0 Herpesvirus-7 repeat of unknown function (DUF865) Lamprin PF06403.11 NODE_72335_length_218_cov_1.666667_g64394_i0forward_frame_1 - 3.2 7.7 7.2 19 5.2 7.2 2.0 1 1 0 1 1 1 0 Lamprin YaaC PF14175.6 NODE_72326_length_218_cov_1.732240_g64385_i0forward_frame_1 - 0.017 14.3 2.2 0.018 14.3 2.2 1.0 1 0 0 1 1 1 0 YaaC-like Protein HEPN_LA2681 PF18733.1 NODE_72325_length_218_cov_1.743169_g64384_i0reverse_frame_1 - 0.0031 16.8 3.2 0.0031 16.8 3.2 1.1 1 0 0 1 1 1 1 LA2681-like HEPN LANC_like PF05147.13 NODE_72322_length_218_cov_1.748634_g64381_i0reverse_frame_1 - 0.061 11.9 0.0 0.066 11.8 0.0 1.0 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein Troponin-I_N PF11636.8 NODE_72312_length_218_cov_1.803279_g64371_i0forward_frame_1 - 0.052 13.5 0.4 0.078 12.9 0.4 1.3 1 0 0 1 1 1 0 Troponin I residues 1-32 TMEM237 PF15383.6 NODE_72309_length_218_cov_1.819672_g64368_i0forward_frame_1 - 0.1 11.7 0.2 0.11 11.5 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 237 Cytadhesin_P30 PF07271.11 NODE_72308_length_218_cov_1.836066_g64367_i0forward_frame_1 - 0.64 9.5 5.1 0.69 9.4 5.1 1.0 1 0 0 1 1 1 0 Cytadhesin P30/P32 OKR_DC_1 PF01276.20 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 2e-34 119.1 0.2 2.1e-34 119.0 0.2 1.0 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Beta_elim_lyase PF01212.21 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 0.0009 18.6 0.1 0.0009 18.6 0.1 1.0 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 0.0034 16.4 0.0 0.0036 16.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V NLPC_P60 PF00877.19 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 0.08 13.0 0.0 0.088 12.8 0.0 1.1 1 0 0 1 1 1 0 NlpC/P60 family DUF5590 PF17881.1 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_1 - 0.1 12.7 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5590) DUF2129 PF09902.9 NODE_72295_length_218_cov_1.967213_g64354_i0reverse_frame_1 - 0.039 14.0 0.8 0.053 13.6 0.8 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2129) Holin_BlyA PF05102.12 NODE_72283_length_218_cov_2.169399_g64342_i0forward_frame_1 - 4.1 7.4 11.6 12 5.9 5.6 2.1 1 1 1 2 2 2 0 holin, BlyA family FrhB_FdhB_N PF04422.13 NODE_72282_length_218_cov_2.185792_g64341_i0forward_frame_1 - 0.039 14.1 0.0 0.045 13.9 0.0 1.1 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term UPF0139 PF03669.13 NODE_72276_length_218_cov_2.284153_g64335_i0forward_frame_1 - 0.032 14.1 1.2 0.037 13.9 1.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) DUF2258 PF10015.9 NODE_72270_length_218_cov_2.377049_g64329_i0reverse_frame_1 - 0.12 12.5 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2258) DUF3278 PF11683.8 NODE_72268_length_218_cov_2.393443_g64327_i0reverse_frame_1 - 0.0032 17.5 2.4 0.0038 17.3 2.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3278) DUF2633 PF11119.8 NODE_72268_length_218_cov_2.393443_g64327_i0reverse_frame_1 - 2.6 8.0 6.7 4.8 7.2 6.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Sgf11 PF08209.11 NODE_72263_length_218_cov_2.540984_g64322_i0forward_frame_1 - 0.025 14.1 0.1 0.025 14.1 0.1 1.6 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) XPA_N PF01286.18 NODE_72261_length_218_cov_2.601093_g64320_i0reverse_frame_1 - 0.0053 16.8 0.0 0.0092 16.0 0.0 1.3 1 0 0 1 1 1 1 XPA protein N-terminal Nucleo_LEF-12 PF06256.11 NODE_72261_length_218_cov_2.601093_g64320_i0reverse_frame_1 - 0.017 14.9 0.3 0.02 14.7 0.3 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus LEF-12 protein BCHF PF07284.11 NODE_72259_length_218_cov_2.617486_g64318_i0forward_frame_1 - 0.055 13.5 1.2 0.065 13.3 1.2 1.1 1 0 0 1 1 1 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) CoxIIa PF08113.11 NODE_72259_length_218_cov_2.617486_g64318_i0forward_frame_1 - 0.062 13.1 2.0 0.14 12.0 2.0 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IIa family Dpy19 PF10034.9 NODE_72259_length_218_cov_2.617486_g64318_i0forward_frame_1 - 0.2 9.8 5.9 0.21 9.8 5.9 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation RolB_RolC PF02027.17 NODE_72257_length_218_cov_2.715847_g64316_i0reverse_frame_1 - 0.072 12.8 0.0 0.073 12.7 0.0 1.0 1 0 0 1 1 1 0 RolB/RolC glucosidase family DUF4269 PF14091.6 NODE_72257_length_218_cov_2.715847_g64316_i0forward_frame_1 - 0.03 14.6 0.1 0.035 14.4 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) FGF PF00167.18 NODE_72256_length_218_cov_2.759563_g64315_i0reverse_frame_1 - 0.067 13.3 0.2 0.076 13.1 0.2 1.0 1 0 0 1 1 1 0 Fibroblast growth factor DUF4407 PF14362.6 NODE_72249_length_218_cov_3.027322_g64308_i0reverse_frame_1 - 0.061 12.7 2.3 0.067 12.5 2.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Claudin_2 PF13903.6 NODE_72249_length_218_cov_3.027322_g64308_i0forward_frame_1 - 0.031 14.0 0.1 0.035 13.9 0.1 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction DUF1454 PF07305.12 NODE_72247_length_218_cov_3.109290_g64306_i0reverse_frame_1 - 0.011 15.3 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1454) Rab3-GTPase_cat PF13890.6 NODE_72242_length_218_cov_3.415301_g64301_i0forward_frame_1 - 0.11 12.1 0.0 0.12 12.0 0.0 1.0 1 0 0 1 1 1 0 Rab3 GTPase-activating protein catalytic subunit CRAL_TRIO PF00650.20 NODE_72241_length_218_cov_3.617486_g64300_i0forward_frame_1 - 5.1e-05 23.1 0.0 6.1e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain DUF4634 PF15465.6 NODE_72241_length_218_cov_3.617486_g64300_i0forward_frame_1 - 0.41 10.9 2.8 0.46 10.8 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4634) UCH PF00443.29 NODE_72233_length_218_cov_6.704918_g64292_i0reverse_frame_1 - 4e-12 46.2 0.0 4.6e-12 46.0 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase ArAE_2_N PF10337.9 NODE_72232_length_218_cov_11.655738_g64291_i0forward_frame_1 - 0.086 11.9 0.0 0.087 11.8 0.0 1.0 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal DUF4604 PF15377.6 NODE_72228_length_218_cov_26.617486_g64287_i0reverse_frame_1 - 0.4 11.1 15.4 0.44 11.0 15.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) RNA_polI_A34 PF08208.11 NODE_72228_length_218_cov_26.617486_g64287_i0reverse_frame_1 - 0.43 10.6 16.1 0.51 10.4 16.1 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Copine PF07002.16 NODE_72225_length_218_cov_30.765027_g64284_i0reverse_frame_1 - 0.00054 19.5 0.0 0.00062 19.3 0.0 1.1 1 0 0 1 1 1 1 Copine Cadherin_tail PF15974.5 NODE_72223_length_218_cov_31.224044_g64282_i0reverse_frame_1 - 2 8.7 8.3 2.3 8.5 3.6 1.9 1 1 1 2 2 2 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region FtsX PF02687.21 NODE_72222_length_218_cov_34.142077_g64281_i0reverse_frame_1 - 0.069 13.6 0.0 0.069 13.6 0.0 1.5 2 0 0 2 2 2 0 FtsX-like permease family LAGLIDADG_2 PF03161.13 NODE_72220_length_218_cov_36.306011_g64279_i0reverse_frame_1 - 0.073 13.1 1.9 0.086 12.9 1.9 1.0 1 0 0 1 1 1 0 LAGLIDADG DNA endonuclease family AAA_9 PF12781.7 NODE_72217_length_218_cov_43.803279_g64276_i0forward_frame_1 - 3.8e-22 78.5 0.1 4.5e-22 78.3 0.1 1.0 1 0 0 1 1 1 1 ATP-binding dynein motor region ERGIC_N PF13850.6 NODE_72212_length_218_cov_47.978142_g64271_i0forward_frame_1 - 0.017 15.5 0.0 0.019 15.3 0.0 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Phospholamban PF04272.14 NODE_72212_length_218_cov_47.978142_g64271_i0forward_frame_1 - 0.16 11.5 2.8 0.22 11.0 2.8 1.2 1 0 0 1 1 1 0 Phospholamban SWIM PF04434.17 NODE_72201_length_218_cov_70.349727_g64260_i0forward_frame_1 - 0.0081 15.8 0.1 0.011 15.4 0.1 1.3 1 0 0 1 1 1 1 SWIM zinc finger NIT PF08376.10 NODE_72198_length_218_cov_71.989071_g64257_i0forward_frame_1 - 0.055 13.9 0.0 0.055 13.9 0.0 1.0 1 0 0 1 1 1 0 Nitrate and nitrite sensing LuxT_C PF18285.1 NODE_72195_length_218_cov_91.754098_g64254_i0reverse_frame_1 - 0.061 13.9 0.1 0.081 13.5 0.1 1.2 1 0 0 1 1 1 0 Tetracycline repressor LuxT C-terminal domain DNA_RNApol_7kD PF03604.13 NODE_72191_length_218_cov_111.792350_g64250_i0reverse_frame_1 - 0.36 10.6 5.4 0.35 10.6 2.7 2.0 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Hydrolase_4 PF12146.8 NODE_72187_length_218_cov_157.234973_g64246_i0reverse_frame_1 - 0.11 11.7 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF5434 PF17502.2 NODE_72169_length_219_cov_0.869565_g64228_i0reverse_frame_1 - 0.01 15.8 0.5 0.01 15.8 0.5 1.3 2 0 0 2 2 2 0 Family of unknown function (DUF5434) Cloacin PF03515.14 NODE_72169_length_219_cov_0.869565_g64228_i0reverse_frame_1 - 0.29 10.8 2.2 0.35 10.5 2.2 1.0 1 0 0 1 1 1 0 Colicin-like bacteriocin tRNase domain Carla_C4 PF01623.17 NODE_72169_length_219_cov_0.869565_g64228_i0forward_frame_1 - 1.1 9.3 8.4 1.5 8.9 8.4 1.2 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein ATP-grasp PF02222.22 NODE_72166_length_219_cov_0.869565_g64225_i0reverse_frame_1 - 0.00012 21.6 0.0 0.00013 21.6 0.0 1.0 1 0 0 1 1 1 1 ATP-grasp domain Myticin-prepro PF10690.9 NODE_72165_length_219_cov_0.869565_g64224_i0forward_frame_1 - 0.065 13.5 1.3 0.073 13.3 1.3 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel SAB PF04382.13 NODE_72161_length_219_cov_0.869565_g64220_i0forward_frame_1 - 0.15 12.1 0.1 0.23 11.5 0.1 1.2 1 0 0 1 1 1 0 SAB domain LEA_4 PF02987.16 NODE_72160_length_219_cov_0.869565_g64219_i0reverse_frame_1 - 0.0052 16.8 11.5 0.011 15.9 11.5 1.6 1 0 0 1 1 1 1 Late embryogenesis abundant protein DUF883 PF05957.13 NODE_72160_length_219_cov_0.869565_g64219_i0reverse_frame_1 - 0.011 16.3 5.5 0.013 16.1 5.5 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Flagellin_N PF00669.20 NODE_72160_length_219_cov_0.869565_g64219_i0reverse_frame_1 - 0.041 14.0 2.1 0.048 13.8 2.1 1.2 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region Spore_II_R PF09551.10 NODE_72160_length_219_cov_0.869565_g64219_i0reverse_frame_1 - 0.34 11.4 2.7 0.39 11.2 2.7 1.0 1 0 0 1 1 1 0 Stage II sporulation protein R (spore_II_R) HECT PF00632.25 NODE_72157_length_219_cov_0.951087_g64216_i0reverse_frame_1 - 0.088 12.3 0.0 0.088 12.3 0.0 1.1 1 0 0 1 1 1 0 HECT-domain (ubiquitin-transferase) DUF2039 PF10217.9 NODE_72156_length_219_cov_0.956522_g64215_i0reverse_frame_1 - 0.0092 16.3 1.1 0.0099 16.2 1.1 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2039) zf-C3HC4_2 PF13923.6 NODE_72148_length_219_cov_1.016304_g64207_i0forward_frame_1 - 0.18 11.7 0.5 0.18 11.7 0.5 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF1828 PF08861.10 NODE_72136_length_219_cov_1.086957_g64195_i0forward_frame_1 - 0.084 13.2 0.1 0.11 12.7 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function DUF1828 DUF3120 PF11318.8 NODE_72136_length_219_cov_1.086957_g64195_i0forward_frame_1 - 0.098 13.0 0.0 0.098 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) NnrU PF07298.11 NODE_72127_length_219_cov_1.190217_g64186_i0forward_frame_1 - 0.058 12.9 0.5 0.062 12.8 0.5 1.0 1 0 0 1 1 1 0 NnrU protein DUF244 PF03112.14 NODE_72126_length_219_cov_1.190217_g64185_i0reverse_frame_1 - 0.025 14.5 0.5 0.027 14.3 0.5 1.1 1 0 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF DUF4768 PF15989.5 NODE_72125_length_219_cov_1.201087_g64184_i0reverse_frame_1 - 0.057 13.4 0.7 0.069 13.1 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) PIP49_N PF14875.6 NODE_72121_length_219_cov_1.233696_g64180_i0reverse_frame_1 - 0.022 14.6 0.5 0.022 14.6 0.5 1.0 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 DUF5540 PF17694.1 NODE_72121_length_219_cov_1.233696_g64180_i0reverse_frame_1 - 0.032 14.7 0.2 0.032 14.7 0.2 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5540) Metallothio PF00131.20 NODE_72116_length_219_cov_1.250000_g64175_i0forward_frame_1 - 0.2 11.8 6.1 0.093 12.9 4.0 1.5 1 1 0 1 1 1 0 Metallothionein RRN9 PF10680.9 NODE_72113_length_219_cov_1.282609_g64172_i0reverse_frame_1 - 0.025 14.8 0.3 0.026 14.8 0.3 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor DUF523 PF04463.12 NODE_72111_length_219_cov_1.288043_g64170_i0forward_frame_1 - 0.0078 16.3 0.2 0.009 16.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF523) YabA PF06156.13 NODE_72104_length_219_cov_1.298913_g64163_i0forward_frame_1 - 0.049 14.3 0.4 0.068 13.8 0.4 1.3 1 0 0 1 1 1 0 Initiation control protein YabA Phage-Gp8 PF09215.10 NODE_72102_length_219_cov_1.304348_g64161_i0reverse_frame_1 - 0.039 13.0 0.0 0.041 12.9 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage T4, Gp8 Peptidase_Mx PF15887.5 NODE_72102_length_219_cov_1.304348_g64161_i0reverse_frame_1 - 0.15 11.4 0.0 0.18 11.2 0.0 1.0 1 0 0 1 1 1 0 Putative zinc-binding metallo-peptidase Peptidase_A24 PF01478.18 NODE_72093_length_219_cov_1.304348_g64152_i0forward_frame_1 - 0.036 14.5 0.5 0.044 14.2 0.5 1.1 1 0 0 1 1 1 0 Type IV leader peptidase family DUF2575 PF10837.8 NODE_72084_length_219_cov_1.369565_g64143_i0forward_frame_1 - 0.094 13.0 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2575) Pkinase PF00069.25 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 4.3e-13 49.2 1.7 5.1e-13 49.0 1.7 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 2e-08 33.8 0.4 2.2e-08 33.7 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.024 14.2 0.1 0.025 14.2 0.1 1.0 1 0 0 1 1 1 0 RIO1 family YrbL-PhoP_reg PF10707.9 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.029 13.9 0.1 0.031 13.8 0.1 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Kdo PF06293.14 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.038 13.3 0.0 0.038 13.3 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.039 13.5 2.1 0.29 10.7 0.2 2.0 1 1 1 2 2 2 0 Choline/ethanolamine kinase APH PF01636.23 NODE_72074_length_219_cov_1.407609_g64133_i0reverse_frame_1 - 0.14 12.1 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family TcpE PF12648.7 NODE_72072_length_219_cov_1.418478_g64131_i0reverse_frame_1 - 0.052 14.1 0.1 0.059 13.9 0.1 1.1 1 0 0 1 1 1 0 TcpE family NAD_binding_11 PF14833.6 NODE_72070_length_219_cov_1.418478_g64129_i0reverse_frame_1 - 0.093 13.0 0.0 0.093 13.0 0.0 1.1 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PBP5_C PF07943.13 NODE_72065_length_219_cov_1.456522_g64124_i0reverse_frame_1 - 0.00043 20.5 0.0 0.00059 20.0 0.0 1.2 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain CDPS PF16715.5 NODE_72065_length_219_cov_1.456522_g64124_i0reverse_frame_1 - 0.14 11.8 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Cyclodipeptide synthase EspF PF04806.12 NODE_72064_length_219_cov_1.467391_g64123_i0forward_frame_1 - 0.014 15.8 1.9 0.014 15.8 1.9 1.7 2 0 0 2 2 2 0 EspF protein repeat LRRNT PF01462.18 NODE_72057_length_219_cov_1.500000_g64116_i0forward_frame_1 - 0.02 14.6 5.0 0.029 14.0 5.0 1.3 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain ECM1 PF05782.11 NODE_72052_length_219_cov_1.521739_g64111_i0forward_frame_1 - 0.02 13.9 0.3 0.022 13.7 0.3 1.1 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) YrzO PF14142.6 NODE_72048_length_219_cov_1.543478_g64107_i0forward_frame_1 - 0.056 13.3 0.4 0.087 12.7 0.4 1.4 1 0 0 1 1 1 0 YrzO-like protein PARP PF00644.20 NODE_72046_length_219_cov_1.565217_g64105_i0forward_frame_1 - 0.017 14.7 0.1 0.037 13.6 0.0 1.6 1 1 1 2 2 2 0 Poly(ADP-ribose) polymerase catalytic domain PyrI_C PF02748.15 NODE_72043_length_219_cov_1.570652_g64102_i0reverse_frame_1 - 3 7.8 6.8 1.7 8.6 0.3 2.2 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF3976 PF13121.6 NODE_72039_length_219_cov_1.592391_g64098_i0reverse_frame_1 - 0.12 12.5 0.6 0.2 11.8 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3976) zf-CCCH_8 PF18633.1 NODE_72012_length_219_cov_1.739130_g64071_i0forward_frame_1 - 0.2 11.8 1.3 3.3 7.9 0.0 2.9 3 0 0 3 3 3 0 Zinc-finger antiviral protein (ZAP) zinc finger domain 3 DUF1974 PF09317.11 NODE_72011_length_219_cov_1.739130_g64070_i0forward_frame_1 - 0.01 15.4 0.1 0.011 15.3 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) WHAMM-JMY_N PF15920.5 NODE_72010_length_219_cov_1.750000_g64069_i0reverse_frame_1 - 0.02 14.8 0.1 0.028 14.3 0.1 1.2 1 0 0 1 1 1 0 N-terminal of Junction-mediating and WASP homolog-associated RMF PF04957.12 NODE_72010_length_219_cov_1.750000_g64069_i0reverse_frame_1 - 0.029 14.6 0.1 0.04 14.1 0.1 1.1 1 0 0 1 1 1 0 Ribosome modulation factor Latarcin PF10279.9 NODE_72008_length_219_cov_1.755435_g64067_i0forward_frame_1 - 0.064 13.7 0.1 0.076 13.4 0.1 1.2 1 0 0 1 1 1 0 Latarcin precursor PAPA-1 PF04795.12 NODE_72008_length_219_cov_1.755435_g64067_i0forward_frame_1 - 0.076 13.8 0.1 0.081 13.7 0.1 1.1 1 0 0 1 1 1 0 PAPA-1-like conserved region PspB PF06667.12 NODE_71999_length_219_cov_1.831522_g64058_i0forward_frame_1 - 7.3 6.7 7.2 4 7.6 5.4 1.5 1 1 0 1 1 1 0 Phage shock protein B PfkB PF00294.24 NODE_71984_length_219_cov_1.956522_g64043_i0forward_frame_1 - 5.4e-08 32.5 0.0 5.6e-08 32.4 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 NODE_71984_length_219_cov_1.956522_g64043_i0forward_frame_1 - 0.17 11.2 0.0 0.29 10.5 0.0 1.5 1 1 0 1 1 1 0 Phosphomethylpyrimidine kinase ALG3 PF05208.13 NODE_71981_length_219_cov_2.016304_g64040_i0reverse_frame_1 - 0.00088 18.8 0.8 0.0015 18.0 0.8 1.5 1 1 0 1 1 1 1 ALG3 protein TBX PF12598.8 NODE_71971_length_219_cov_2.163043_g64030_i0reverse_frame_1 - 0.13 13.1 0.7 0.17 12.7 0.7 1.2 1 0 0 1 1 1 0 T-box transcription factor SCRL PF06876.12 NODE_71966_length_219_cov_2.228261_g64025_i0forward_frame_1 - 0.089 13.0 7.8 0.1 12.8 7.8 1.1 1 0 0 1 1 1 0 Plant self-incompatibility response (SCRL) protein Methyltransf_25 PF13649.6 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.0019 18.8 0.0 0.0033 18.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.0052 16.3 0.0 0.0065 16.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.19 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.078 13.1 0.0 0.089 12.9 0.0 1.1 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.092 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_71964_length_219_cov_2.282609_g64023_i0reverse_frame_1 - 0.093 12.6 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain EZH2_N PF18601.1 NODE_71962_length_219_cov_2.309783_g64021_i0reverse_frame_1 - 0.097 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 EZH2 N-terminal domain Adeno_IVa2 PF02456.15 NODE_71961_length_219_cov_2.358696_g64020_i0reverse_frame_1 - 0.056 12.2 0.5 0.062 12.1 0.5 1.0 1 0 0 1 1 1 0 Adenovirus IVa2 protein HEAT_2 PF13646.6 NODE_71961_length_219_cov_2.358696_g64020_i0forward_frame_1 - 3.8e-07 30.4 0.1 2.1e-06 28.1 0.0 1.8 1 1 1 2 2 2 1 HEAT repeats HEAT PF02985.22 NODE_71961_length_219_cov_2.358696_g64020_i0forward_frame_1 - 4.6e-05 23.3 1.9 0.26 11.7 0.0 2.9 3 0 0 3 3 3 2 HEAT repeat HEAT_PBS PF03130.16 NODE_71961_length_219_cov_2.358696_g64020_i0forward_frame_1 - 0.0011 19.5 0.1 0.002 18.6 0.0 1.5 2 0 0 2 2 2 1 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 NODE_71961_length_219_cov_2.358696_g64020_i0forward_frame_1 - 0.0055 17.2 0.1 3.4 8.3 0.0 2.3 2 1 0 2 2 2 2 HEAT-like repeat ketoacyl-synt PF00109.26 NODE_71960_length_219_cov_2.364130_g64019_i0forward_frame_1 - 9.9e-21 74.5 0.6 1e-20 74.4 0.6 1.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Thiolase_N PF00108.23 NODE_71960_length_219_cov_2.364130_g64019_i0forward_frame_1 - 2.1e-07 30.6 0.4 2.5e-07 30.4 0.4 1.0 1 0 0 1 1 1 1 Thiolase, N-terminal domain Bac_small_YrzI PF09501.10 NODE_71958_length_219_cov_2.380435_g64017_i0forward_frame_1 - 0.1 12.8 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 Probable sporulation protein (Bac_small_yrzI) DUF2013 PF09431.10 NODE_71957_length_219_cov_2.391304_g64016_i0reverse_frame_1 - 0.0098 16.1 0.6 0.01 16.0 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2013) WD40 PF00400.32 NODE_71952_length_219_cov_2.652174_g64011_i0reverse_frame_1 - 0.0057 17.5 0.0 0.0094 16.8 0.0 1.5 1 0 0 1 1 1 1 WD domain, G-beta repeat ELYS-bb PF16687.5 NODE_71952_length_219_cov_2.652174_g64011_i0reverse_frame_1 - 0.058 12.0 0.0 0.061 11.9 0.0 1.0 1 0 0 1 1 1 0 beta-propeller of ELYS nucleoporin AgrD PF05931.11 NODE_71949_length_219_cov_2.907609_g64008_i0forward_frame_1 - 0.064 13.3 0.2 0.091 12.8 0.2 1.3 1 0 0 1 1 1 0 Staphylococcal AgrD protein MAS20 PF02064.15 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_1 - 0.42 10.7 8.2 0.64 10.1 8.2 1.3 1 0 0 1 1 1 0 MAS20 protein import receptor cNMP_binding PF00027.29 NODE_71942_length_219_cov_3.309783_g64001_i0reverse_frame_1 - 4.1e-12 46.0 0.1 4.7e-12 45.8 0.1 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Cupin_2 PF07883.11 NODE_71942_length_219_cov_3.309783_g64001_i0reverse_frame_1 - 0.015 15.0 0.3 0.034 13.8 0.3 1.7 1 1 0 1 1 1 0 Cupin domain zf-C3HC4_4 PF15227.6 NODE_71940_length_219_cov_3.407609_g63999_i0reverse_frame_1 - 0.04 14.1 1.4 0.071 13.3 1.4 1.6 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 NODE_71940_length_219_cov_3.407609_g63999_i0reverse_frame_1 - 0.054 13.3 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Ribosomal_S30AE PF02482.19 NODE_71939_length_219_cov_3.434783_g63998_i0forward_frame_1 - 0.11 13.3 0.0 0.12 13.1 0.0 1.1 1 0 0 1 1 1 0 Sigma 54 modulation protein / S30EA ribosomal protein Suv3_N PF18114.1 NODE_71933_length_219_cov_4.168478_g63992_i0forward_frame_1 - 0.15 12.2 0.5 3.9 7.6 0.1 2.0 1 1 1 2 2 2 0 Suv3 helical N-terminal domain Phage_holin_3_6 PF07332.11 NODE_71923_length_219_cov_20.554348_g63982_i0reverse_frame_1 - 0.15 12.1 0.2 0.17 11.9 0.2 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III CofC PF01983.16 NODE_71918_length_219_cov_32.722826_g63977_i0reverse_frame_1 - 0.033 13.4 0.5 0.037 13.2 0.5 1.0 1 0 0 1 1 1 0 Guanylyl transferase CofC like DUF3624 PF12292.8 NODE_71917_length_219_cov_32.853261_g63976_i0forward_frame_1 - 0.0034 17.8 0.9 0.0047 17.3 0.9 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3624) ASXH PF13919.6 NODE_71914_length_219_cov_34.070652_g63973_i0reverse_frame_1 - 0.0072 16.3 0.8 0.0087 16.1 0.8 1.1 1 0 0 1 1 1 1 Asx homology domain MAP17 PF15807.5 NODE_71911_length_219_cov_35.559783_g63970_i0reverse_frame_1 - 0.06 13.6 2.3 0.068 13.4 2.3 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Connexin PF00029.19 NODE_71911_length_219_cov_35.559783_g63970_i0reverse_frame_1 - 0.97 9.1 4.9 1 9.0 4.9 1.0 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_71911_length_219_cov_35.559783_g63970_i0reverse_frame_1 - 1.2 7.8 2.7 1.2 7.8 2.7 1.1 1 0 0 1 1 1 0 Presenilin DUF5560 PF17715.1 NODE_71910_length_219_cov_37.603261_g63969_i0forward_frame_1 - 0.071 12.6 0.9 0.11 12.0 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5560) Ycf70 PF17382.2 NODE_71909_length_219_cov_37.782609_g63968_i0reverse_frame_1 - 0.014 15.8 1.1 0.014 15.8 1.1 1.6 1 1 1 2 2 2 0 Uncharacterized Ycf70-like PDR_CDR PF06422.12 NODE_71909_length_219_cov_37.782609_g63968_i0reverse_frame_1 - 1.3 8.9 7.5 4.4 7.3 1.1 2.1 1 1 1 2 2 2 0 CDR ABC transporter zf-RING_2 PF13639.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 1.9e-13 50.5 9.8 2.4e-13 50.2 9.8 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 1.1e-11 44.4 9.7 1.4e-11 44.0 9.7 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 1.4e-10 41.0 8.7 2e-10 40.5 8.7 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 4.3e-10 39.7 9.6 1.7e-09 37.8 9.6 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-Nse PF11789.8 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 1.9e-09 37.2 5.1 2.3e-09 36.9 5.1 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4 PF00097.25 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 4.1e-09 36.2 10.1 5.6e-09 35.7 10.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 1.9e-07 30.9 7.9 2.5e-07 30.5 7.9 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 5.3e-07 29.4 8.1 7.1e-07 29.0 8.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 4.5e-06 26.7 11.6 6.9e-06 26.1 11.6 1.3 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 7e-06 26.0 2.1 8.5e-06 25.7 2.1 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 7.7e-06 25.7 11.6 6.7e-05 22.7 4.3 2.2 1 1 1 2 2 2 2 Prokaryotic RING finger family 4 U-box PF04564.15 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 8.2e-05 22.7 0.0 0.00012 22.1 0.0 1.3 1 1 0 1 1 1 1 U-box domain Zn_ribbon_17 PF17120.5 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.00093 18.8 5.0 0.0013 18.3 5.0 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.0011 18.7 6.4 0.0021 17.7 6.4 1.5 1 0 0 1 1 1 1 RING-like zinc finger Zn-ribbon_8 PF09723.10 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.0023 18.0 4.4 0.036 14.2 0.8 2.2 2 0 0 2 2 2 1 Zinc ribbon domain Rad50_zn_hook PF04423.14 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.0053 16.6 2.0 1.6 8.7 0.2 2.5 2 0 0 2 2 2 2 Rad50 zinc hook motif zf-RING_6 PF14835.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.017 14.9 4.9 1 9.3 6.3 2.0 1 1 1 2 2 2 0 zf-RING of BARD1-type protein zf-RING_4 PF14570.6 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.049 13.4 9.6 0.16 11.8 2.9 2.1 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain Rtf2 PF04641.12 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.058 12.7 4.9 0.087 12.2 4.9 1.3 1 1 0 1 1 1 0 Rtf2 RING-finger FANCL_C PF11793.8 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.21 11.8 10.1 2.4 8.4 10.1 2.5 1 1 0 1 1 1 0 FANCL C-terminal domain PHD_4 PF16866.5 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.22 11.6 7.7 0.36 10.9 7.7 1.3 1 1 0 1 1 1 0 PHD-finger GAGA PF09237.11 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.26 11.1 3.8 7 6.5 0.1 2.4 2 1 0 2 2 2 0 GAGA factor zf-P11 PF03854.14 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.26 11.0 8.6 2.7 7.7 2.7 2.2 1 1 1 2 2 2 0 P-11 zinc finger Antistasin PF02822.14 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 0.44 11.2 6.8 6.2 7.6 0.3 2.3 2 1 0 2 2 2 0 Antistasin family zf-MIZ PF02891.20 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 3.4 7.5 10.3 17 5.2 10.3 1.9 1 1 0 1 1 1 0 MIZ/SP-RING zinc finger RINGv PF12906.7 NODE_71906_length_219_cov_39.706522_g63965_i0forward_frame_1 - 5.6 7.2 10.3 44 4.3 10.0 2.0 1 1 1 2 2 2 0 RING-variant domain Erg28 PF03694.13 NODE_71897_length_219_cov_44.402174_g63956_i0reverse_frame_1 - 0.0079 16.6 0.4 0.0096 16.3 0.4 1.1 1 0 0 1 1 1 1 Erg28 like protein OrfB_Zn_ribbon PF07282.11 NODE_71896_length_219_cov_48.125000_g63955_i0forward_frame_1 - 3.5 7.6 10.7 0.31 11.0 4.9 1.8 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf-C2HC_2 PF13913.6 NODE_71895_length_219_cov_48.646739_g63954_i0reverse_frame_1 - 0.013 15.4 1.2 0.013 15.4 1.2 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type DUF281 PF03436.13 NODE_71888_length_219_cov_58.760870_g63947_i0forward_frame_1 - 0.029 14.8 0.2 0.057 13.8 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF281) Rtt106_N PF18215.1 NODE_71874_length_219_cov_86.478261_g63933_i0forward_frame_1 - 0.16 11.7 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain Mannosyl_trans PF05007.13 NODE_71870_length_219_cov_92.073826_g63929_i0forward_frame_1 - 0.032 14.1 0.8 0.032 14.1 0.8 1.1 1 0 0 1 1 1 0 Mannosyltransferase (PIG-M) DUF347 PF03988.12 NODE_71866_length_219_cov_118.630435_g63925_i0forward_frame_1 - 0.12 12.6 2.8 0.21 11.8 2.8 1.4 1 0 0 1 1 1 0 Repeat of Unknown Function (DUF347) zf-B_box PF00643.24 NODE_71863_length_219_cov_125.695652_g63922_i0reverse_frame_1 - 0.00023 21.3 2.2 0.00037 20.6 2.2 1.3 1 0 0 1 1 1 1 B-box zinc finger Oxidored-like PF09791.9 NODE_71860_length_219_cov_141.271739_g63919_i0forward_frame_1 - 0.0082 15.8 1.3 0.014 15.1 1.3 1.4 1 0 0 1 1 1 1 Oxidoreductase-like protein, N-terminal Tristanin_u2 PF16638.5 NODE_71858_length_219_cov_143.375000_g63917_i0reverse_frame_1 - 0.19 12.6 7.8 0.27 12.1 7.8 1.3 1 0 0 1 1 1 0 Unstructured region on methyltransferase between zinc-fingers Pept_tRNA_hydro PF01195.19 NODE_71855_length_219_cov_165.907609_g63914_i0reverse_frame_1 - 0.11 12.5 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase Coagulin PF02035.15 NODE_71854_length_219_cov_167.179348_g63913_i0forward_frame_1 - 0.078 12.9 0.1 0.087 12.7 0.1 1.1 1 0 0 1 1 1 0 Coagulin MOZ_SAS PF01853.18 NODE_71845_length_219_cov_126178.125000_g63904_i0reverse_frame_1 - 0.025 14.3 1.8 0.027 14.1 1.8 1.1 1 0 0 1 1 1 0 MOZ/SAS family SP_C-Propep PF08999.10 NODE_71842_length_220_cov_0.848649_g63901_i0forward_frame_3 - 4.9 7.0 12.2 8.6 6.2 12.2 1.5 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide HemY_N PF07219.13 NODE_71842_length_220_cov_0.848649_g63901_i0forward_frame_2 - 0.27 11.4 3.7 0.35 11.1 3.7 1.1 1 0 0 1 1 1 0 HemY protein N-terminus Chromo_2 PF18704.1 NODE_71835_length_220_cov_0.864865_g63894_i0forward_frame_3 - 0.021 15.1 0.0 0.023 15.0 0.0 1.1 1 0 0 1 1 1 0 Chromatin organization modifier domain 2 REV PF00424.18 NODE_71834_length_220_cov_0.864865_g63893_i0reverse_frame_3 - 0.06 13.4 0.8 0.07 13.1 0.8 1.1 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) S4 PF01479.25 NODE_71831_length_220_cov_0.864865_g63890_i0reverse_frame_3 - 0.03 14.0 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 S4 domain Filamin PF00630.19 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 2.6e-05 25.0 0.0 2.9e-05 24.8 0.0 1.1 1 0 0 1 1 1 1 Filamin/ABP280 repeat BclA_C PF18573.1 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 6e-05 22.9 0.9 6.6e-05 22.8 0.9 1.1 1 0 0 1 1 1 1 BclA C-terminal domain Cadherin_5 PF17892.1 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 7.2e-05 22.7 0.4 7.2e-05 22.7 0.4 1.1 1 0 0 1 1 1 1 Cadherin-like domain Invasin_D3 PF09134.10 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 8.3e-05 22.8 0.5 9.7e-05 22.6 0.5 1.1 1 0 0 1 1 1 1 Invasin, domain 3 Big_9 PF17963.1 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_3 - 0.011 16.5 0.9 0.011 16.4 0.9 1.1 1 0 0 1 1 1 0 Bacterial Ig domain Fer4_22 PF17179.4 NODE_71830_length_220_cov_0.864865_g63889_i0reverse_frame_2 - 1.7 9.5 11.5 2.5 9.0 11.5 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain FAM75 PF14650.6 NODE_71826_length_220_cov_0.929730_g63885_i0reverse_frame_3 - 0.0099 15.5 0.9 0.011 15.3 0.9 1.0 1 0 0 1 1 1 1 FAM75 family NICE-1 PF15845.5 NODE_71824_length_220_cov_0.945946_g63883_i0forward_frame_3 - 0.075 13.8 10.7 0.087 13.6 10.7 1.1 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family BAT PF15915.5 NODE_71822_length_220_cov_0.989189_g63881_i0forward_frame_2 - 0.081 12.8 0.0 0.099 12.5 0.0 1.1 1 0 0 1 1 1 0 GAF and HTH_10 associated domain GidB PF02527.15 NODE_71821_length_220_cov_0.994595_g63880_i0forward_frame_3 - 3.9e-20 72.0 0.1 4.2e-20 71.8 0.1 1.0 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G SAWADEE PF16719.5 NODE_71817_length_220_cov_1.027027_g63876_i0forward_frame_2 - 0.16 11.9 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 SAWADEE domain DUF3884 PF13024.6 NODE_71817_length_220_cov_1.027027_g63876_i0forward_frame_2 - 0.3 10.7 0.5 0.42 10.2 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) DUF2062 PF09835.9 NODE_71810_length_220_cov_1.059459_g63869_i0reverse_frame_2 - 0.12 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) FKS1_dom1 PF14288.6 NODE_71806_length_220_cov_1.081081_g63865_i0forward_frame_3 - 0.028 14.7 0.3 0.032 14.6 0.3 1.2 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 Lamprin PF06403.11 NODE_71804_length_220_cov_1.102703_g63863_i0reverse_frame_3 - 0.00096 19.1 4.1 0.00096 19.1 4.1 1.1 1 0 0 1 1 1 1 Lamprin ADH_N_assoc PF13823.6 NODE_71802_length_220_cov_1.151351_g63861_i0reverse_frame_2 - 0.14 12.1 0.1 18 5.4 0.0 2.2 2 0 0 2 2 2 0 Alcohol dehydrogenase GroES-associated Pox_D5 PF03288.16 NODE_71802_length_220_cov_1.151351_g63861_i0forward_frame_2 - 0.027 15.0 0.0 0.028 14.9 0.0 1.1 1 0 0 1 1 1 0 Poxvirus D5 protein-like TPP_enzyme_C PF02775.21 NODE_71797_length_220_cov_1.183784_g63856_i0reverse_frame_2 - 0.062 13.1 0.0 0.08 12.7 0.0 1.2 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SCF PF02404.15 NODE_71795_length_220_cov_1.200000_g63854_i0reverse_frame_3 - 0.0046 16.3 0.2 0.0047 16.3 0.2 1.0 1 0 0 1 1 1 1 Stem cell factor Dioxygenase_C PF00775.21 NODE_71791_length_220_cov_1.237838_g63850_i0reverse_frame_2 - 0.038 13.4 0.0 0.038 13.4 0.0 1.1 1 0 0 1 1 1 0 Dioxygenase GSAP-16 PF14959.6 NODE_71790_length_220_cov_1.243243_g63849_i0forward_frame_2 - 0.015 15.2 0.1 0.018 14.9 0.1 1.2 1 0 0 1 1 1 0 gamma-Secretase-activating protein C-term Ribosomal_L36 PF00444.18 NODE_71787_length_220_cov_1.270270_g63846_i0reverse_frame_3 - 4.4 7.6 8.8 5.6 7.2 1.3 2.2 2 0 0 2 2 2 0 Ribosomal protein L36 DUF4575 PF15143.6 NODE_71786_length_220_cov_1.270270_g63845_i0reverse_frame_3 - 0.0026 17.9 1.2 0.0028 17.9 1.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4575) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks368.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks368.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks368.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks368.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:35:55 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-CHC2 PF01807.20 NODE_71775_length_220_cov_1.297297_g63834_i0forward_frame_2 - 0.0037 17.0 0.1 0.0056 16.5 0.1 1.3 1 0 0 1 1 1 1 CHC2 zinc finger Aconitase PF00330.20 NODE_71771_length_220_cov_1.297297_g63830_i0forward_frame_2 - 0.086 11.8 0.2 0.096 11.7 0.2 1.0 1 0 0 1 1 1 0 Aconitase family (aconitate hydratase) DUF4236 PF14020.6 NODE_71770_length_220_cov_1.297297_g63829_i0reverse_frame_3 - 0.016 15.8 1.2 0.35 11.5 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4236) MbtH PF03621.13 NODE_71767_length_220_cov_1.297297_g63826_i0reverse_frame_3 - 0.078 12.4 0.1 0.13 11.8 0.0 1.4 2 0 0 2 2 2 0 MbtH-like protein DUF3611 PF12263.8 NODE_71761_length_220_cov_1.340541_g63820_i0reverse_frame_2 - 0.024 14.6 0.4 0.028 14.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) HemY_N PF07219.13 NODE_71761_length_220_cov_1.340541_g63820_i0reverse_frame_2 - 0.063 13.5 0.5 0.072 13.3 0.5 1.2 1 0 0 1 1 1 0 HemY protein N-terminus MAPEG PF01124.18 NODE_71761_length_220_cov_1.340541_g63820_i0reverse_frame_2 - 0.17 11.8 0.1 0.2 11.6 0.1 1.1 1 0 0 1 1 1 0 MAPEG family OFeT_1 PF16955.5 NODE_71761_length_220_cov_1.340541_g63820_i0reverse_frame_2 - 0.33 10.6 4.4 0.44 10.2 4.4 1.4 1 1 0 1 1 1 0 Ferrous iron uptake permease, iron-lead transporter DUF2569 PF10754.9 NODE_71761_length_220_cov_1.340541_g63820_i0forward_frame_3 - 0.58 10.6 9.0 0.73 10.3 8.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2569) Peptidase_A24 PF01478.18 NODE_71760_length_220_cov_1.345946_g63819_i0forward_frame_2 - 0.11 12.9 1.7 0.15 12.5 1.7 1.3 1 1 0 1 1 1 0 Type IV leader peptidase family Toxin_3 PF00537.18 NODE_71759_length_220_cov_1.351351_g63818_i0forward_frame_2 - 0.31 11.3 9.2 0.54 10.5 9.2 1.4 1 0 0 1 1 1 0 Scorpion toxin-like domain Thyroglobulin_1 PF00086.18 NODE_71756_length_220_cov_1.356757_g63815_i0forward_frame_3 - 0.14 11.9 1.4 0.18 11.5 1.4 1.2 1 0 0 1 1 1 0 Thyroglobulin type-1 repeat DUF3481 PF11980.8 NODE_71752_length_220_cov_1.389189_g63811_i0reverse_frame_2 - 0.21 11.3 5.7 0.18 11.5 1.2 2.1 2 1 0 2 2 2 0 C-terminal domain of neuropilin glycoprotein DUF2614 PF11023.8 NODE_71752_length_220_cov_1.389189_g63811_i0reverse_frame_2 - 0.57 10.3 4.7 0.4 10.8 3.5 1.3 1 1 0 1 1 1 0 Zinc-ribbon containing domain Na_Ala_symp PF01235.17 NODE_71750_length_220_cov_1.400000_g63809_i0reverse_frame_2 - 0.94 8.7 4.6 1 8.6 4.6 1.0 1 0 0 1 1 1 0 Sodium:alanine symporter family zf-RING_UBOX PF13445.6 NODE_71749_length_220_cov_1.400000_g63808_i0reverse_frame_3 - 0.012 15.6 2.5 0.019 15.0 2.5 1.4 1 0 0 1 1 1 0 RING-type zinc-finger Pox_A14 PF05767.12 NODE_71749_length_220_cov_1.400000_g63808_i0forward_frame_3 - 0.019 15.1 0.7 0.028 14.6 0.5 1.4 1 1 0 1 1 1 0 Poxvirus virion envelope protein A14 SR-25 PF10500.9 NODE_71748_length_220_cov_1.410811_g63807_i0reverse_frame_2 - 0.26 10.9 5.9 0.28 10.8 5.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Herpes_pp85 PF04637.12 NODE_71748_length_220_cov_1.410811_g63807_i0reverse_frame_2 - 0.73 8.2 6.9 0.67 8.3 6.9 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Lamprin PF06403.11 NODE_71746_length_220_cov_1.421622_g63805_i0forward_frame_3 - 0.0062 16.5 1.1 0.0076 16.2 1.1 1.1 1 0 0 1 1 1 1 Lamprin Inhibitor_I68 PF10468.9 NODE_71746_length_220_cov_1.421622_g63805_i0forward_frame_2 - 0.12 12.8 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Carboxypeptidase inhibitor I68 DUF4244 PF14029.6 NODE_71741_length_220_cov_1.443243_g63800_i0reverse_frame_2 - 0.26 10.7 1.8 0.35 10.4 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4244) DUF3045 PF11243.8 NODE_71740_length_220_cov_1.443243_g63799_i0reverse_frame_3 - 0.11 12.6 2.0 0.19 11.9 2.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3045) LSR PF05624.14 NODE_71739_length_220_cov_1.443243_g63798_i0reverse_frame_2 - 2.7 8.0 13.9 0.58 10.2 10.7 1.7 1 1 0 1 1 1 0 Lipolysis stimulated receptor (LSR) GatB_N PF02934.15 NODE_71735_length_220_cov_1.502703_g63794_i0forward_frame_2 - 0.024 14.0 0.2 0.026 13.9 0.2 1.1 1 0 0 1 1 1 0 GatB/GatE catalytic domain Ribosomal_L1 PF00687.21 NODE_71731_length_220_cov_1.513514_g63790_i0reverse_frame_3 - 4.8e-10 39.5 0.0 4.9e-10 39.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family CitMHS PF03600.16 NODE_71729_length_220_cov_1.513514_g63788_i0forward_frame_3 - 0.011 14.9 8.8 0.013 14.7 8.8 1.0 1 0 0 1 1 1 0 Citrate transporter MatC_N PF07158.11 NODE_71729_length_220_cov_1.513514_g63788_i0forward_frame_3 - 0.029 14.4 3.8 0.032 14.3 3.8 1.0 1 0 0 1 1 1 0 Dicarboxylate carrier protein MatC N-terminus FixS PF03597.15 NODE_71729_length_220_cov_1.513514_g63788_i0forward_frame_3 - 8.8 6.1 8.2 0.7 9.6 2.6 2.0 2 1 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type Leader_Trp PF08255.11 NODE_71729_length_220_cov_1.513514_g63788_i0forward_frame_2 - 0.025 14.5 0.9 0.09 12.8 0.9 1.9 1 0 0 1 1 1 0 Trp-operon Leader Peptide UCH PF00443.29 NODE_71725_length_220_cov_1.545946_g63784_i0reverse_frame_2 - 0.052 13.0 0.0 0.052 13.0 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase DUF5548 PF17702.1 NODE_71725_length_220_cov_1.545946_g63784_i0reverse_frame_2 - 0.074 12.8 0.0 0.081 12.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5548) TcpA PF05946.12 NODE_71724_length_220_cov_1.556757_g63783_i0reverse_frame_2 - 0.059 13.5 0.1 0.059 13.5 0.1 1.1 1 0 0 1 1 1 0 Toxin-coregulated pilus subunit TcpA Med6 PF04934.14 NODE_71721_length_220_cov_1.600000_g63780_i0reverse_frame_2 - 0.036 13.9 0.2 0.036 13.9 0.2 1.2 1 0 0 1 1 1 0 MED6 mediator sub complex component FucT_N PF18025.1 NODE_71721_length_220_cov_1.600000_g63780_i0forward_frame_3 - 0.053 14.0 0.2 0.053 14.0 0.2 1.1 1 0 0 1 1 1 0 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain Lamprin PF06403.11 NODE_71719_length_220_cov_1.621622_g63778_i0forward_frame_3 - 0.042 13.8 1.3 0.049 13.6 1.3 1.1 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_71719_length_220_cov_1.621622_g63778_i0forward_frame_2 - 0.0011 18.9 0.0 0.0012 18.8 0.0 1.0 1 0 0 1 1 1 1 Lamprin UPF0093 PF03653.13 NODE_71718_length_220_cov_1.621622_g63777_i0reverse_frame_3 - 0.03 14.6 0.0 0.033 14.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) MATalpha_HMGbox PF04769.12 NODE_71718_length_220_cov_1.621622_g63777_i0forward_frame_3 - 0.01 15.1 0.1 0.012 14.9 0.1 1.1 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box Rdx PF10262.9 NODE_71717_length_220_cov_1.627027_g63776_i0forward_frame_3 - 1.5 9.1 5.4 1.2 9.4 2.9 1.9 1 1 1 2 2 2 0 Rdx family T6SS_VipA PF05591.12 NODE_71717_length_220_cov_1.627027_g63776_i0forward_frame_2 - 9.6e-13 48.2 0.4 9.9e-13 48.2 0.4 1.0 1 0 0 1 1 1 1 Type VI secretion system, VipA, VC_A0107 or Hcp2 F_actin_bind PF08919.10 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.001 19.1 1.1 0.001 19.1 1.1 1.5 1 1 1 2 2 2 1 F-actin binding DivIC PF04977.15 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.0017 18.1 6.2 0.013 15.3 1.9 2.0 1 1 1 2 2 2 1 Septum formation initiator TPR_MLP1_2 PF07926.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.0036 17.3 6.4 0.0044 17.1 6.4 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein DUF5344 PF17279.2 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.0073 16.9 6.1 0.018 15.6 6.1 1.6 1 1 0 1 1 1 1 Family of unknown function (DUF5344) OGG_N PF07934.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.011 15.9 0.7 0.011 15.8 0.7 1.1 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain BRX_N PF13713.6 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.027 14.2 0.0 6.6 6.6 0.0 2.4 2 0 0 2 2 2 0 Transcription factor BRX N-terminal domain Occludin_ELL PF07303.13 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.031 15.0 0.9 0.034 14.9 0.9 1.1 1 0 0 1 1 1 0 Occludin homology domain TcdB_N PF12918.7 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.05 13.9 5.4 0.067 13.5 0.3 2.5 1 1 1 2 2 2 0 TcdB toxin N-terminal helical domain ERp29 PF07749.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.053 14.4 1.9 1.2 10.0 0.2 2.0 2 0 0 2 2 2 0 Endoplasmic reticulum protein ERp29, C-terminal domain FlxA PF14282.6 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.077 13.0 15.0 0.13 12.3 12.1 2.0 1 1 1 2 2 2 0 FlxA-like protein YabA PF06156.13 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.14 12.8 3.4 0.26 11.9 0.9 2.0 1 1 0 1 1 1 0 Initiation control protein YabA ACCA PF03255.14 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.18 11.7 1.6 0.28 11.0 1.6 1.4 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ApbE PF02424.15 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.21 11.1 1.2 0.23 11.0 1.2 1.1 1 0 0 1 1 1 0 ApbE family DUF3450 PF11932.8 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.21 10.9 6.7 0.24 10.7 6.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Mem_trans PF03547.18 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.33 9.3 1.7 0.35 9.2 1.7 1.0 1 0 0 1 1 1 0 Membrane transport protein MbeD_MobD PF04899.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.35 11.0 5.7 0.51 10.5 2.5 2.1 1 1 1 2 2 2 0 MbeD/MobD like LPP PF04728.13 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 0.78 10.2 13.9 12 6.4 0.5 3.0 1 1 1 2 2 2 0 Lipoprotein leucine-zipper SlyX PF04102.12 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 1.3 9.7 5.1 73 4.1 5.1 2.3 1 1 0 1 1 1 0 SlyX TolA_bind_tri PF16331.5 NODE_71715_length_220_cov_1.664865_g63774_i0reverse_frame_2 - 1.9 8.6 9.8 0.63 10.2 3.3 2.3 1 1 1 2 2 2 0 TolA binding protein trimerisation Biliv-reduc_cat PF09166.10 NODE_71715_length_220_cov_1.664865_g63774_i0forward_frame_2 - 0.062 13.6 0.0 0.07 13.4 0.0 1.1 1 0 0 1 1 1 0 Biliverdin reductase, catalytic RAMP4 PF06624.12 NODE_71711_length_220_cov_1.675676_g63770_i0forward_frame_2 - 0.015 15.3 0.0 0.019 15.0 0.0 1.2 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 PRRSV_Env PF02340.15 NODE_71709_length_220_cov_1.686486_g63768_i0forward_frame_3 - 0.0075 15.7 0.4 0.0078 15.6 0.4 1.0 1 0 0 1 1 1 1 PRRSV putative envelope protein BTRD1 PF17660.1 NODE_71708_length_220_cov_1.697297_g63767_i0reverse_frame_3 - 0.14 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial tandem repeat domain 1 APO_RNA-bind PF05634.11 NODE_71702_length_220_cov_1.724324_g63761_i0reverse_frame_3 - 0.047 13.1 0.1 0.047 13.1 0.1 1.0 1 0 0 1 1 1 0 APO RNA-binding DUF3881 PF12997.7 NODE_71701_length_220_cov_1.724324_g63760_i0reverse_frame_3 - 0.0085 15.4 0.1 0.0098 15.2 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function, E. rectale Gene description (DUF3881) GBP PF02263.19 NODE_71693_length_220_cov_1.756757_g63752_i0reverse_frame_2 - 7e-16 58.3 1.2 8.1e-16 58.1 1.2 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain MC1 PF05854.11 NODE_71690_length_220_cov_1.783784_g63749_i0reverse_frame_3 - 0.19 12.1 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 Non-histone chromosomal protein MC1 zf-HYPF PF07503.12 NODE_71689_length_220_cov_1.783784_g63748_i0forward_frame_2 - 0.031 14.0 0.4 0.054 13.3 0.4 1.4 1 0 0 1 1 1 0 HypF finger Rubredoxin_2 PF18073.1 NODE_71689_length_220_cov_1.783784_g63748_i0forward_frame_2 - 1 9.1 7.5 2.3 8.0 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain IBV_3B PF03622.13 NODE_71686_length_220_cov_1.810811_g63745_i0forward_frame_3 - 0.079 13.1 2.3 0.19 11.9 0.5 2.0 1 1 1 2 2 2 0 IBV 3B protein CAF1 PF04857.20 NODE_71684_length_220_cov_1.837838_g63743_i0reverse_frame_3 - 7.2e-05 22.1 0.0 7.5e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 CAF1 family ribonuclease GCH_III PF05165.12 NODE_71676_length_220_cov_1.940541_g63735_i0reverse_frame_3 - 0.18 11.0 0.0 0.21 10.8 0.0 1.0 1 0 0 1 1 1 0 GTP cyclohydrolase III Mod_r PF07200.13 NODE_71675_length_220_cov_1.945946_g63734_i0reverse_frame_2 - 0.012 15.8 0.9 0.012 15.7 0.9 1.0 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Muted PF14942.6 NODE_71675_length_220_cov_1.945946_g63734_i0reverse_frame_2 - 0.033 14.5 0.5 0.038 14.3 0.5 1.0 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Oxidored_molyb PF00174.19 NODE_71674_length_220_cov_1.951351_g63733_i0forward_frame_2 - 0.16 11.6 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain YmaF PF12788.7 NODE_71668_length_220_cov_2.043243_g63727_i0reverse_frame_3 - 0.016 15.7 0.0 0.019 15.5 0.0 1.1 1 0 0 1 1 1 0 YmaF family DUF3995 PF13160.6 NODE_71667_length_220_cov_2.043243_g63726_i0forward_frame_3 - 0.019 15.3 0.7 0.022 15.1 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) SNARE PF05739.19 NODE_71666_length_220_cov_2.043243_g63725_i0forward_frame_3 - 0.11 12.6 4.0 0.15 12.0 4.0 1.3 1 0 0 1 1 1 0 SNARE domain Herpes_U47 PF05467.11 NODE_71666_length_220_cov_2.043243_g63725_i0forward_frame_3 - 0.32 9.1 5.3 0.34 9.0 5.3 1.0 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 zf-C3HC PF07967.13 NODE_71665_length_220_cov_2.048649_g63724_i0forward_frame_2 - 0.028 14.4 0.3 0.03 14.4 0.3 1.1 1 0 0 1 1 1 0 C3HC zinc finger-like GAGBD PF16828.5 NODE_71664_length_220_cov_2.059459_g63723_i0forward_frame_2 - 0.012 15.7 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 0 GAG-binding domain on surface antigen OB_NTP_bind PF07717.16 NODE_71662_length_220_cov_2.075676_g63721_i0reverse_frame_3 - 0.15 12.5 0.0 0.22 11.9 0.0 1.3 1 1 0 1 1 1 0 Oligonucleotide/oligosaccharide-binding (OB)-fold DUF5090 PF17009.5 NODE_71656_length_220_cov_2.113514_g63715_i0forward_frame_2 - 0.036 14.0 0.5 0.041 13.9 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Kdo PF06293.14 NODE_71655_length_220_cov_2.118919_g63714_i0reverse_frame_3 - 0.016 14.5 0.1 0.016 14.5 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF5520 PF17658.1 NODE_71655_length_220_cov_2.118919_g63714_i0reverse_frame_2 - 0.028 13.6 0.1 0.029 13.5 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5520) Conotoxin PF02950.17 NODE_71651_length_220_cov_2.162162_g63710_i0reverse_frame_2 - 0.61 11.1 5.0 0.75 10.8 4.9 1.3 1 1 0 1 1 1 0 Conotoxin Pesticin PF16754.5 NODE_71650_length_220_cov_2.200000_g63709_i0reverse_frame_2 - 0.0086 16.0 0.3 0.0091 16.0 0.3 1.1 1 0 0 1 1 1 1 Bacterial toxin homologue of phage lysozyme, C-term gp45-slide_C PF09116.10 NODE_71650_length_220_cov_2.200000_g63709_i0reverse_frame_2 - 0.0088 16.1 0.3 0.011 15.7 0.3 1.1 1 0 0 1 1 1 1 gp45 sliding clamp, C terminal UPF0556 PF10572.9 NODE_71648_length_220_cov_2.232432_g63707_i0forward_frame_3 - 0.065 12.7 0.1 0.069 12.6 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0556 RTC4 PF14474.6 NODE_71642_length_220_cov_2.318919_g63701_i0reverse_frame_2 - 0.052 13.7 0.0 0.073 13.2 0.0 1.3 1 1 0 1 1 1 0 RTC4-like domain Rubredoxin_2 PF18073.1 NODE_71641_length_220_cov_2.329730_g63700_i0reverse_frame_2 - 0.035 13.8 0.2 0.052 13.3 0.2 1.3 1 0 0 1 1 1 0 Rubredoxin metal binding domain NADH_dehy_S2_C PF06444.11 NODE_71640_length_220_cov_2.329730_g63699_i0forward_frame_2 - 0.55 10.8 8.4 0.49 11.0 7.1 1.5 2 0 0 2 2 2 0 NADH dehydrogenase subunit 2 C-terminus DUF2116 PF09889.9 NODE_71635_length_220_cov_2.421622_g63694_i0reverse_frame_3 - 0.018 15.0 1.9 0.031 14.3 1.9 1.5 1 1 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Yeast_MT PF11403.8 NODE_71634_length_220_cov_2.432432_g63693_i0reverse_frame_2 - 0.13 12.8 0.4 0.13 12.8 0.4 2.3 2 0 0 2 2 2 0 Yeast metallothionein DUF4679 PF15728.5 NODE_71630_length_220_cov_2.454054_g63689_i0reverse_frame_3 - 0.067 12.2 0.1 0.069 12.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) MRP-S26 PF14943.6 NODE_71626_length_220_cov_2.545946_g63685_i0reverse_frame_3 - 6.4 6.6 21.5 7.4 6.4 21.5 1.1 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 DUF4224 PF13986.6 NODE_71620_length_220_cov_2.708108_g63679_i0forward_frame_3 - 0.078 12.9 0.5 0.12 12.3 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4224) NOD PF06816.13 NODE_71616_length_220_cov_2.794595_g63675_i0forward_frame_3 - 0.062 12.9 0.0 0.076 12.6 0.0 1.3 1 0 0 1 1 1 0 NOTCH protein ARF7EP_C PF14949.6 NODE_71615_length_220_cov_2.810811_g63674_i0reverse_frame_3 - 0.14 12.8 1.3 0.16 12.6 1.3 1.1 1 0 0 1 1 1 0 ARF7 effector protein C-terminus SspK PF08176.12 NODE_71615_length_220_cov_2.810811_g63674_i0forward_frame_3 - 0.012 15.9 0.0 0.017 15.4 0.0 1.3 1 0 0 1 1 1 0 Small acid-soluble spore protein K family zf-C3Hc3H PF13891.6 NODE_71614_length_220_cov_2.810811_g63673_i0forward_frame_3 - 0.29 11.5 5.5 0.64 10.4 0.1 2.2 1 1 1 2 2 2 0 Potential DNA-binding domain DUF2589 PF11655.8 NODE_71614_length_220_cov_2.810811_g63673_i0forward_frame_2 - 0.13 12.5 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2589) RabGAP-TBC PF00566.18 NODE_71610_length_220_cov_2.983784_g63669_i0reverse_frame_3 - 6.2e-09 35.8 0.8 6.6e-09 35.7 0.8 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain TRAM1 PF08390.11 NODE_71610_length_220_cov_2.983784_g63669_i0reverse_frame_3 - 0.0077 15.9 0.3 0.013 15.1 0.0 1.6 2 0 0 2 2 2 1 TRAM1-like protein DUF2104 PF09877.9 NODE_71609_length_220_cov_3.016216_g63668_i0reverse_frame_3 - 0.073 13.3 1.2 0.092 13.0 1.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2104) LRR_4 PF12799.7 NODE_71604_length_220_cov_3.502703_g63663_i0reverse_frame_2 - 0.025 15.0 0.3 0.032 14.6 0.3 1.2 1 0 0 1 1 1 0 Leucine Rich repeats (2 copies) DUF3810 PF12725.7 NODE_71603_length_220_cov_3.518919_g63662_i0reverse_frame_2 - 0.23 10.8 6.4 0.24 10.7 6.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DUF4389 PF14333.6 NODE_71603_length_220_cov_3.518919_g63662_i0reverse_frame_2 - 2 8.4 7.5 5.5 7.0 1.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) FKBP_N_2 PF18023.1 NODE_71603_length_220_cov_3.518919_g63662_i0forward_frame_2 - 0.0033 17.5 0.7 0.004 17.2 0.7 1.2 1 1 0 1 1 1 1 BDBT FKBP like N-terminal SMC_N PF02463.19 NODE_71603_length_220_cov_3.518919_g63662_i0forward_frame_2 - 0.0033 16.9 0.6 0.0039 16.7 0.6 1.0 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain PAP2 PF01569.21 NODE_71597_length_220_cov_4.054054_g63656_i0reverse_frame_3 - 0.033 14.0 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 PAP2 superfamily Pkinase_fungal PF17667.1 NODE_71592_length_220_cov_6.621622_g63651_i0forward_frame_3 - 0.00085 18.2 0.0 0.0009 18.1 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Pkinase PF00069.25 NODE_71592_length_220_cov_6.621622_g63651_i0forward_frame_3 - 0.004 16.6 0.0 0.0042 16.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Period_C PF12114.8 NODE_71583_length_220_cov_19.383784_g63642_i0forward_frame_2 - 6.1 6.4 11.6 6.9 6.2 11.6 1.1 1 0 0 1 1 1 0 Period protein 2/3C-terminal region fn2 PF00040.19 NODE_71579_length_220_cov_21.794595_g63638_i0reverse_frame_2 - 0.034 14.4 0.0 0.052 13.8 0.0 1.5 1 1 0 1 1 1 0 Fibronectin type II domain Shadoo PF14999.6 NODE_71578_length_220_cov_24.367568_g63637_i0forward_frame_3 - 1 9.5 12.6 1.3 9.1 12.6 1.3 1 0 0 1 1 1 0 Shadow of prion protein, neuroprotective Ac110_PIF PF07280.11 NODE_71577_length_220_cov_24.659459_g63636_i0reverse_frame_2 - 0.18 11.6 2.1 0.27 11.0 2.1 1.2 1 0 0 1 1 1 0 Per os infectivity factor AC110 FAM209 PF15206.6 NODE_71577_length_220_cov_24.659459_g63636_i0forward_frame_2 - 0.0088 15.8 0.6 0.011 15.6 0.6 1.1 1 0 0 1 1 1 1 FAM209 family Gemini_AC4_5_2 PF08464.10 NODE_71574_length_220_cov_30.086486_g63633_i0reverse_frame_3 - 0.08 12.9 0.2 0.13 12.3 0.2 1.4 1 0 0 1 1 1 0 Geminivirus AC4/5 conserved region DUF2374 PF09574.10 NODE_71572_length_220_cov_33.448649_g63631_i0forward_frame_3 - 0.11 12.3 1.0 0.14 12.0 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (Duf2374) RSN1_7TM PF02714.15 NODE_71571_length_220_cov_35.545946_g63630_i0reverse_frame_2 - 0.06 12.6 4.1 0.067 12.5 4.1 1.1 1 0 0 1 1 1 0 Calcium-dependent channel, 7TM region, putative phosphate Msap1 PF17077.5 NODE_71570_length_220_cov_35.827027_g63629_i0forward_frame_3 - 0.071 12.3 0.1 0.075 12.2 0.1 1.0 1 0 0 1 1 1 0 Mitotic spindle associated protein SHE1 DUF4536 PF15055.6 NODE_71568_length_220_cov_38.589189_g63627_i0reverse_frame_2 - 0.61 10.4 4.6 1.3 9.4 2.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4536) S-antigen PF05756.11 NODE_71567_length_220_cov_39.145946_g63626_i0reverse_frame_2 - 0.038 14.3 1.2 0.046 14.1 1.2 1.1 1 0 0 1 1 1 0 S-antigen protein EFTUD2 PF16004.5 NODE_71566_length_220_cov_41.313514_g63625_i0reverse_frame_2 - 0.078 13.6 0.0 0.098 13.2 0.0 1.2 1 0 0 1 1 1 0 116 kDa U5 small nuclear ribonucleoprotein component N-terminus Lustrin_cystein PF14625.6 NODE_71566_length_220_cov_41.313514_g63625_i0forward_frame_3 - 1.2 9.5 11.7 4.1 7.9 2.7 2.1 1 1 1 2 2 2 0 Lustrin, cysteine-rich repeated domain Bee_toxin PF17454.2 NODE_71565_length_220_cov_41.686486_g63624_i0forward_frame_3 - 0.18 11.9 7.4 0.27 11.3 6.7 1.8 1 1 0 1 1 1 0 Honey bee toxin SmpB PF01668.18 NODE_71564_length_220_cov_42.210811_g63623_i0reverse_frame_3 - 0.038 13.9 0.1 0.04 13.8 0.1 1.1 1 0 0 1 1 1 0 SmpB protein Squash PF00299.18 NODE_71563_length_220_cov_42.464865_g63622_i0forward_frame_2 - 0.022 14.8 4.7 0.022 14.8 4.7 1.7 2 0 0 2 2 2 0 Squash family serine protease inhibitor Phospholamban PF04272.14 NODE_71561_length_220_cov_43.021622_g63620_i0forward_frame_2 - 0.035 13.6 2.5 0.058 12.9 2.5 1.3 1 0 0 1 1 1 0 Phospholamban ecTbetaR2 PF08917.10 NODE_71559_length_220_cov_44.372973_g63618_i0reverse_frame_2 - 0.075 13.0 0.6 0.081 12.9 0.6 1.1 1 0 0 1 1 1 0 Transforming growth factor beta receptor 2 ectodomain VPS9 PF02204.18 NODE_71558_length_220_cov_45.616216_g63617_i0forward_frame_2 - 0.071 13.3 0.2 0.081 13.1 0.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain Lenti_VIF_2 PF07401.12 NODE_71556_length_220_cov_47.772973_g63615_i0forward_frame_3 - 0.015 14.6 0.1 0.018 14.4 0.1 1.1 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein DUF3522 PF12036.8 NODE_71553_length_220_cov_51.151351_g63612_i0forward_frame_3 - 0.0015 18.9 0.4 0.0016 18.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3522) DUF1421 PF07223.11 NODE_71548_length_220_cov_56.016216_g63607_i0forward_frame_2 - 0.23 11.3 0.0 0.35 10.8 0.0 1.2 1 0 0 1 1 1 0 UBA-like domain (DUF1421) ART PF01129.18 NODE_71547_length_220_cov_56.972973_g63606_i0reverse_frame_3 - 0.062 12.6 0.0 0.07 12.4 0.0 1.0 1 0 0 1 1 1 0 NAD:arginine ADP-ribosyltransferase Cys_rich_KTR PF14205.6 NODE_71547_length_220_cov_56.972973_g63606_i0forward_frame_2 - 0.02 14.7 1.5 0.034 14.0 1.5 1.4 1 0 0 1 1 1 0 Cysteine-rich KTR Megourin PF17560.2 NODE_71543_length_220_cov_60.718919_g63602_i0reverse_frame_3 - 0.48 10.7 3.2 14 6.0 0.4 2.1 2 0 0 2 2 2 0 Aphid Megourins CSN7a_helixI PF18392.1 NODE_71542_length_220_cov_63.129730_g63601_i0reverse_frame_3 - 0.05 13.5 1.8 0.071 13.0 1.8 1.2 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain FBPase_3 PF01950.16 NODE_71541_length_220_cov_63.789189_g63600_i0reverse_frame_2 - 0.13 11.4 0.0 0.15 11.2 0.0 1.0 1 0 0 1 1 1 0 Fructose-1,6-bisphosphatase DUF3246 PF11596.8 NODE_71541_length_220_cov_63.789189_g63600_i0forward_frame_2 - 0.029 13.8 0.2 0.032 13.7 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3246) DUF1554 PF07588.11 NODE_71541_length_220_cov_63.789189_g63600_i0forward_frame_2 - 0.18 11.6 0.5 0.22 11.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1554) Agenet PF05641.12 NODE_71535_length_220_cov_68.048649_g63594_i0reverse_frame_2 - 1.9e-06 28.2 0.3 2.2e-06 28.0 0.3 1.1 1 0 0 1 1 1 1 Agenet domain Peptidase_C71 PF12386.8 NODE_71535_length_220_cov_68.048649_g63594_i0reverse_frame_2 - 0.0011 18.6 0.1 0.0012 18.5 0.1 1.2 1 0 0 1 1 1 1 Pseudomurein endo-isopeptidase Pei SAWADEE PF16719.5 NODE_71535_length_220_cov_68.048649_g63594_i0reverse_frame_2 - 0.0019 18.2 0.0 0.0021 18.1 0.0 1.1 1 0 0 1 1 1 1 SAWADEE domain Tudor-knot PF11717.8 NODE_71535_length_220_cov_68.048649_g63594_i0reverse_frame_2 - 0.065 13.1 0.1 0.096 12.6 0.1 1.3 1 0 0 1 1 1 0 RNA binding activity-knot of a chromodomain Cnn_1N PF07989.11 NODE_71533_length_220_cov_72.664865_g63592_i0reverse_frame_2 - 0.064 13.4 0.1 0.086 13.0 0.1 1.1 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 DUF4637 PF15470.6 NODE_71533_length_220_cov_72.664865_g63592_i0forward_frame_2 - 0.074 12.8 0.5 0.088 12.5 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) RACo_linker PF17650.1 NODE_71531_length_220_cov_74.708108_g63590_i0reverse_frame_2 - 0.061 13.2 0.3 0.066 13.1 0.3 1.1 1 0 0 1 1 1 0 RACo linker region IPTL-CTERM PF18203.1 NODE_71531_length_220_cov_74.708108_g63590_i0forward_frame_3 - 1.2 9.1 5.0 2.1 8.3 5.0 1.4 1 0 0 1 1 1 0 IPTL-CTERM motif DUF2415 PF10313.9 NODE_71530_length_220_cov_78.708108_g63589_i0forward_frame_2 - 0.17 11.9 0.2 0.26 11.3 0.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein domain (DUF2415) Bac_RepA_C PF18008.1 NODE_71527_length_220_cov_86.135135_g63586_i0reverse_frame_3 - 0.014 15.8 0.5 0.016 15.5 0.5 1.1 1 0 0 1 1 1 0 Replication initiator protein A C-terminal domain zf-WRNIP1_ubi PF18279.1 NODE_71525_length_220_cov_95.037838_g63584_i0forward_frame_2 - 1.2 9.9 5.6 7.1 7.5 1.4 2.6 1 1 1 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain HpaB_N PF11794.8 NODE_71523_length_220_cov_104.945946_g63582_i0reverse_frame_2 - 0.02 14.5 0.0 0.022 14.4 0.0 1.0 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal zf-C2H2 PF00096.26 NODE_71518_length_220_cov_202.545946_g63577_i0forward_frame_2 - 0.00032 21.0 5.0 0.00063 20.1 3.2 2.4 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_71518_length_220_cov_202.545946_g63577_i0forward_frame_2 - 0.026 15.3 2.7 0.026 15.3 2.7 2.1 2 1 0 2 2 2 0 C2H2-type zinc finger Nodulin_late PF07127.11 NODE_71518_length_220_cov_202.545946_g63577_i0forward_frame_2 - 0.72 10.2 6.6 0.21 12.0 2.5 1.9 2 0 0 2 2 2 0 Late nodulin protein DUF2089 PF09862.9 NODE_71516_length_220_cov_223.329730_g63575_i0reverse_frame_3 - 0.05 13.6 0.2 0.065 13.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) BDHCT PF08072.11 NODE_71516_length_220_cov_223.329730_g63575_i0forward_frame_3 - 0.092 12.8 0.4 0.25 11.4 0.1 1.9 2 0 0 2 2 2 0 BDHCT (NUC031) domain Elf1 PF05129.13 NODE_71516_length_220_cov_223.329730_g63575_i0forward_frame_2 - 0.032 14.3 3.0 0.046 13.8 3.0 1.3 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like CAV_VP3 PF04771.12 NODE_71515_length_220_cov_227.567568_g63574_i0reverse_frame_3 - 0.075 13.2 0.0 0.08 13.1 0.0 1.1 1 0 0 1 1 1 0 Chicken anaemia virus VP-3 protein IpgD PF05925.12 NODE_71512_length_220_cov_345.394595_g63571_i0reverse_frame_2 - 0.18 10.3 0.0 0.2 10.2 0.0 1.0 1 0 0 1 1 1 0 Enterobacterial virulence protein IpgD TMEM138 PF14935.6 NODE_71510_length_220_cov_782.021622_g63569_i0forward_frame_3 - 0.028 15.1 2.6 0.032 14.9 2.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 138 NAD_binding_1 PF00175.21 NODE_71509_length_220_cov_2009.156757_g63568_i0forward_frame_2 - 0.00034 21.2 0.0 0.00034 21.2 0.0 1.2 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain RRN3 PF05327.11 NODE_71504_length_221_cov_0.854839_g63563_i0reverse_frame_2 - 0.22 10.1 0.6 0.22 10.0 0.6 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 zf-NADH-PPase PF09297.11 NODE_71502_length_221_cov_0.860215_g63561_i0forward_frame_3 - 0.15 11.7 2.1 2 8.1 0.2 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF2258 PF10015.9 NODE_71495_length_221_cov_0.962366_g63554_i0reverse_frame_3 - 0.0016 18.5 1.3 0.032 14.3 0.7 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2258) Mod_r PF07200.13 NODE_71495_length_221_cov_0.962366_g63554_i0reverse_frame_3 - 0.027 14.6 2.4 0.027 14.6 2.4 1.0 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein TraF_2 PF13729.6 NODE_71495_length_221_cov_0.962366_g63554_i0reverse_frame_3 - 0.094 12.1 1.5 0.11 11.9 1.5 1.1 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein PanZ PF12568.8 NODE_71494_length_221_cov_0.967742_g63553_i0reverse_frame_3 - 0.066 12.9 0.1 0.074 12.8 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ DUF5040 PF16443.5 NODE_71493_length_221_cov_0.978495_g63552_i0reverse_frame_3 - 0.063 12.7 0.2 0.064 12.6 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5040) ANAPC3 PF12895.7 NODE_71493_length_221_cov_0.978495_g63552_i0forward_frame_3 - 0.02 15.1 0.9 0.027 14.7 0.9 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 Cellulose_synt PF03552.14 NODE_71491_length_221_cov_1.026882_g63550_i0reverse_frame_3 - 1.6 7.1 9.7 1.8 6.9 9.7 1.0 1 0 0 1 1 1 0 Cellulose synthase SUB1_ProdP9 PF18213.1 NODE_71491_length_221_cov_1.026882_g63550_i0forward_frame_2 - 0.043 13.7 0.1 0.053 13.4 0.1 1.1 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 zf-U1 PF06220.12 NODE_71490_length_221_cov_1.053763_g63549_i0forward_frame_2 - 0.74 9.6 5.1 3.9 7.3 0.4 2.3 2 0 0 2 2 2 0 U1 zinc finger NADH_4Fe-4S PF10589.9 NODE_71489_length_221_cov_1.064516_g63548_i0reverse_frame_3 - 0.71 10.0 6.9 3.1 7.9 5.3 2.0 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AKAP7_NLS PF10469.9 NODE_71489_length_221_cov_1.064516_g63548_i0reverse_frame_2 - 0.0069 16.3 0.0 0.0075 16.2 0.0 1.0 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain 2_5_RNA_ligase2 PF13563.6 NODE_71489_length_221_cov_1.064516_g63548_i0reverse_frame_2 - 0.11 12.3 0.0 0.13 12.2 0.0 1.0 1 0 0 1 1 1 0 2'-5' RNA ligase superfamily DUF2946 PF11162.8 NODE_71486_length_221_cov_1.064516_g63545_i0forward_frame_3 - 0.017 15.8 4.2 0.027 15.1 4.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2946) TAF1_subA PF14929.6 NODE_71483_length_221_cov_1.075269_g63542_i0forward_frame_3 - 0.3 10.5 1.6 0.32 10.4 1.6 1.0 1 0 0 1 1 1 0 TAF RNA Polymerase I subunit A Folate_rec PF03024.14 NODE_71481_length_221_cov_1.080645_g63540_i0forward_frame_3 - 0.014 15.2 5.4 0.016 15.1 5.4 1.1 1 0 0 1 1 1 0 Folate receptor family SK_channel PF03530.14 NODE_71481_length_221_cov_1.080645_g63540_i0forward_frame_2 - 0.0041 17.1 0.6 0.0042 17.1 0.6 1.0 1 0 0 1 1 1 1 Calcium-activated SK potassium channel UTP15_C PF09384.10 NODE_71481_length_221_cov_1.080645_g63540_i0forward_frame_2 - 0.1 12.3 0.1 0.13 12.0 0.1 1.3 1 0 0 1 1 1 0 UTP15 C terminal Sec66 PF09802.9 NODE_71478_length_221_cov_1.172043_g63537_i0forward_frame_2 - 0.049 13.2 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit Sec66 TTL PF03133.15 NODE_71477_length_221_cov_1.177419_g63536_i0forward_frame_2 - 1.5e-26 93.3 0.1 1.5e-26 93.2 0.1 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Auxin_BP PF02041.16 NODE_71477_length_221_cov_1.177419_g63536_i0forward_frame_2 - 0.069 12.8 0.0 0.069 12.8 0.0 1.0 1 0 0 1 1 1 0 Auxin binding protein ATP-grasp_3 PF02655.14 NODE_71477_length_221_cov_1.177419_g63536_i0forward_frame_2 - 0.21 11.7 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 ATP-grasp domain Vif PF00559.17 NODE_71471_length_221_cov_1.236559_g63530_i0reverse_frame_3 - 0.12 12.1 1.2 0.12 12.0 1.2 1.1 1 0 0 1 1 1 0 Retroviral Vif (Viral infectivity) protein Cript PF10235.9 NODE_71468_length_221_cov_1.241935_g63527_i0reverse_frame_2 - 0.018 15.6 0.3 0.019 15.5 0.3 1.2 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT DUF1213 PF06740.12 NODE_71466_length_221_cov_1.263441_g63525_i0reverse_frame_2 - 0.11 13.0 0.6 6.6 7.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1213) CCER1 PF15482.6 NODE_71466_length_221_cov_1.263441_g63525_i0forward_frame_2 - 1.5 8.7 11.7 1.6 8.5 11.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 Cullin PF00888.22 NODE_71462_length_221_cov_1.279570_g63521_i0forward_frame_3 - 0.15 10.6 0.0 0.17 10.4 0.0 1.0 1 0 0 1 1 1 0 Cullin family DAN PF03045.15 NODE_71458_length_221_cov_1.284946_g63517_i0forward_frame_2 - 0.0087 16.1 0.3 0.013 15.5 0.3 1.2 1 0 0 1 1 1 1 DAN domain pRN1_helical PF13010.6 NODE_71457_length_221_cov_1.284946_g63516_i0forward_frame_2 - 0.12 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Primase helical domain Toxin_24 PF08094.11 NODE_71455_length_221_cov_1.290323_g63514_i0reverse_frame_3 - 3 7.7 7.0 0.44 10.4 2.6 1.8 2 0 0 2 2 2 0 Conotoxin TVIIA/GS family Cyclin_C PF02984.19 NODE_71454_length_221_cov_1.290323_g63513_i0forward_frame_3 - 5e-06 26.6 0.1 5.5e-06 26.5 0.1 1.1 1 0 0 1 1 1 1 Cyclin, C-terminal domain IRK PF01007.20 NODE_71450_length_221_cov_1.290323_g63509_i0forward_frame_3 - 0.0078 16.0 2.1 0.009 15.8 2.1 1.2 1 0 0 1 1 1 1 Inward rectifier potassium channel transmembrane domain DUF4858 PF16150.5 NODE_71445_length_221_cov_1.290323_g63504_i0reverse_frame_2 - 0.061 13.4 0.1 0.063 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4858) DUF35_N PF12172.8 NODE_71443_length_221_cov_1.306452_g63502_i0reverse_frame_2 - 0.13 12.2 1.1 0.13 12.2 1.1 1.9 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) RANK_CRD_2 PF18278.1 NODE_71440_length_221_cov_1.322581_g63499_i0reverse_frame_3 - 0.0037 17.4 1.9 0.0054 16.9 1.9 1.3 1 0 0 1 1 1 1 Receptor activator of the NF-KB cysteine-rich repeat domain 2 Ribosomal_L12_N PF16320.5 NODE_71436_length_221_cov_1.327957_g63495_i0reverse_frame_3 - 0.0035 17.0 0.5 0.0046 16.6 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L7/L12 dimerisation domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks369.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks369.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks369.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks369.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- IFT57 PF10498.9 ORF52051 - 4.3e-102 341.8 3.4 5e-102 341.6 3.4 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 JIP_LZII PF16471.5 ORF52051 - 0.0024 18.0 0.7 0.0024 18.0 0.7 2.9 2 1 1 3 3 3 1 JNK-interacting protein leucine zipper II Cytochrom_C_2 PF01322.20 ORF52051 - 0.0047 17.8 3.1 0.01 16.7 3.1 1.6 1 0 0 1 1 1 1 Cytochrome C' DUF948 PF06103.11 ORF52051 - 0.0084 16.4 6.0 0.26 11.6 0.2 3.2 1 1 2 3 3 3 1 Bacterial protein of unknown function (DUF948) Exonuc_VII_L PF02601.15 ORF52051 - 0.017 14.7 4.2 0.023 14.3 4.2 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF1664 PF07889.12 ORF52051 - 0.02 14.9 3.7 0.02 14.9 3.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 ORF52051 - 0.031 14.3 11.5 0.2 11.6 9.7 2.2 1 1 1 2 2 2 0 Laminin Domain II SOGA PF11365.8 ORF52051 - 0.039 15.1 4.1 0.039 15.1 4.1 2.0 3 0 0 3 3 1 0 Protein SOGA NPV_P10 PF05531.12 ORF52051 - 0.044 14.2 10.4 2.7 8.5 0.3 3.5 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein Baculo_PEP_C PF04513.12 ORF52051 - 0.069 13.2 1.6 0.33 11.0 0.4 2.3 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus ATG16 PF08614.11 ORF52051 - 0.076 13.2 9.6 0.17 12.1 9.7 1.5 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Jnk-SapK_ap_N PF09744.9 ORF52051 - 0.11 12.8 10.7 0.18 12.0 10.7 1.3 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF2203 PF09969.9 ORF52051 - 0.13 13.0 6.8 0.17 12.6 3.9 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) FlaC_arch PF05377.11 ORF52051 - 0.18 12.2 6.7 9.6 6.7 2.9 3.1 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Snapin_Pallidin PF14712.6 ORF52051 - 0.21 12.0 7.6 2 8.9 1.6 2.6 2 0 0 2 2 2 0 Snapin/Pallidin DUF3450 PF11932.8 ORF52051 - 0.25 10.6 6.9 0.14 11.5 4.6 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF2205 PF10224.9 ORF52051 - 0.35 10.9 9.6 0.93 9.5 1.5 2.8 1 1 2 3 3 3 0 Short coiled-coil protein DUF148 PF02520.17 ORF52051 - 0.41 10.8 8.2 0.17 12.0 1.1 2.4 1 1 1 2 2 2 0 Domain of unknown function DUF148 Allexi_40kDa PF05549.11 ORF52051 - 0.5 9.8 9.3 0.18 11.3 2.0 2.1 1 1 1 2 2 2 0 Allexivirus 40kDa protein Spc7 PF08317.11 ORF52051 - 0.55 9.0 15.1 1.6 7.5 15.1 1.7 1 1 0 1 1 1 0 Spc7 kinetochore protein Occludin_ELL PF07303.13 ORF52051 - 0.63 10.8 10.2 2.5 8.9 6.1 2.4 1 1 1 2 2 2 0 Occludin homology domain Prominin PF05478.11 ORF52051 - 0.67 7.8 5.8 0.95 7.3 5.8 1.2 1 0 0 1 1 1 0 Prominin KxDL PF10241.9 ORF52051 - 1 9.7 8.7 3.5 8.0 0.9 2.9 2 1 1 3 3 2 0 Uncharacterized conserved protein DUF2408 PF10303.9 ORF52051 - 1.1 9.8 10.5 7.2 7.2 4.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) DivIC PF04977.15 ORF52051 - 1.2 9.0 5.3 0.61 9.9 1.7 2.5 1 1 1 2 2 2 0 Septum formation initiator Prefoldin_2 PF01920.20 ORF52051 - 1.3 9.0 12.5 1.4 8.9 2.5 2.7 1 1 0 2 2 2 0 Prefoldin subunit YgaB PF14182.6 ORF52051 - 1.5 9.3 13.1 1.4 9.4 1.1 3.2 2 1 1 3 3 3 0 YgaB-like protein TPR_MLP1_2 PF07926.12 ORF52051 - 1.5 8.9 11.1 6.8 6.8 3.3 2.4 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Tropomyosin_1 PF12718.7 ORF52051 - 1.6 8.9 16.5 0.1 12.7 7.7 2.3 1 1 1 2 2 2 0 Tropomyosin like BLOC1_2 PF10046.9 ORF52051 - 1.9 8.9 8.6 6.8 7.1 5.7 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 V_ATPase_I PF01496.19 ORF52051 - 2.6 5.8 7.3 3.5 5.4 7.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Syntaxin PF00804.25 ORF52051 - 3.3 7.3 13.2 1.8 8.2 3.6 2.3 1 1 1 2 2 2 0 Syntaxin COG5 PF10392.9 ORF52051 - 4.6 7.4 9.1 5 7.3 0.8 2.9 1 1 0 2 2 2 0 Golgi transport complex subunit 5 DUF16 PF01519.16 ORF52051 - 4.9 7.7 10.0 12 6.4 8.7 2.2 1 1 1 2 2 2 0 Protein of unknown function DUF16 Fib_alpha PF08702.10 ORF52051 - 5.4 7.2 12.5 1.4 9.1 4.9 2.3 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family DUF724 PF05266.14 ORF52051 - 6.7 6.5 15.2 3 7.6 10.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) PRKG1_interact PF15898.5 ORF52051 - 6.9 7.6 13.3 2.1 9.3 3.8 2.4 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DUF4407 PF14362.6 ORF52051 - 7.3 5.9 7.5 11 5.3 7.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Uds1 PF15456.6 ORF52051 - 8.9 6.5 10.4 3 8.0 6.6 2.1 2 1 0 2 2 2 0 Up-regulated During Septation COG2 PF06148.11 ORF52051 - 9.1 6.4 11.2 3.8 7.6 1.3 3.3 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 sCache_3_2 PF17203.4 ORF46277 - 2.2e-22 79.7 0.7 4.9e-22 78.6 0.2 1.7 2 0 0 2 2 2 1 Single cache domain 3 PAS PF00989.25 ORF46277 - 3.9e-09 36.5 0.0 7.5e-09 35.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold dCache_1 PF02743.18 ORF46277 - 2.8e-06 27.3 0.1 1.4e-05 25.0 0.0 1.9 2 0 0 2 2 2 1 Cache domain PAS_8 PF13188.7 ORF46277 - 8.3e-06 25.7 0.0 2.2e-05 24.4 0.0 1.7 1 0 0 1 1 1 1 PAS domain dCache_3 PF14827.6 ORF46277 - 0.002 17.8 0.1 0.02 14.6 0.0 2.0 2 0 0 2 2 2 1 Double sensory domain of two-component sensor kinase LrgB PF04172.16 ORF46277 - 0.016 14.8 2.1 0.25 10.8 0.1 2.2 2 0 0 2 2 2 0 LrgB-like family PAS_10 PF13596.6 ORF46277 - 0.016 15.8 0.0 0.056 14.0 0.0 1.8 2 0 0 2 2 2 0 PAS domain sCache_3_3 PF17202.4 ORF46277 - 0.027 14.9 0.0 0.058 13.8 0.0 1.5 1 0 0 1 1 1 0 Single cache domain 3 DUF996 PF06195.13 ORF46277 - 0.031 14.6 4.1 3.7 7.8 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF996) CbtA_toxin PF06755.12 ORF46277 - 0.06 13.4 0.1 0.16 12.0 0.1 1.7 1 0 0 1 1 1 0 CbtA_toxin of type IV toxin-antitoxin system DUF2530 PF10745.9 ORF46277 - 0.14 12.4 0.7 4.3 7.7 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2530) PAS_7 PF12860.7 ORF46277 - 0.15 12.3 0.0 0.3 11.3 0.0 1.5 1 0 0 1 1 1 0 PAS fold EP400_N PF15790.5 ORF43606 - 0.0044 15.9 7.8 0.36 9.6 1.0 2.5 2 0 0 2 2 2 2 E1A-binding protein p400, N-terminal Hydrolase_4 PF12146.8 ORF37094 - 6.8e-08 32.1 0.0 8.9e-08 31.7 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF37094 - 5.4e-06 26.2 0.4 7.2e-05 22.5 0.4 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF900 PF05990.12 ORF37094 - 0.00083 18.9 0.0 0.0017 17.9 0.0 1.6 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) DUF915 PF06028.11 ORF37094 - 0.0059 16.0 0.0 0.0097 15.3 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF915) Abhydrolase_6 PF12697.7 ORF37094 - 0.011 16.3 0.0 0.016 15.8 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF676 PF05057.14 ORF37094 - 0.047 13.2 0.1 0.077 12.5 0.1 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) UQ_con PF00179.26 ORF17070 - 9.8e-09 35.0 0.0 2.3e-08 33.8 0.0 1.7 1 1 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF5475 PF17569.2 ORF150880 - 0.1 12.9 1.2 0.51 10.7 0.3 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5475) DUF1298 PF06974.13 ORF12828 - 6.6e-10 39.1 0.2 1.7e-09 37.8 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF12828 - 5.7e-08 32.8 0.0 8.7e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain SwrA PF17423.2 ORF12828 - 0.029 14.4 1.4 0.043 13.8 0.1 2.0 2 0 0 2 2 2 0 Swarming motility protein GntP_permease PF02447.16 ORF12484 - 9.4e-173 574.9 34.7 1.1e-172 574.7 34.7 1.0 1 0 0 1 1 1 1 GntP family permease CitMHS PF03600.16 ORF12484 - 2.2e-26 92.8 33.4 3e-26 92.3 33.4 1.1 1 0 0 1 1 1 1 Citrate transporter Na_H_antiporter PF03553.14 ORF12484 - 0.00021 20.7 21.2 0.00021 20.7 21.2 2.7 1 1 1 2 2 2 1 Na+/H+ antiporter family DUF3007 PF11460.8 ORF12484 - 0.03 14.6 1.3 0.1 12.8 1.3 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) SpecificRecomb PF10136.9 ORF12484 - 0.34 9.1 3.8 0.66 8.2 3.8 1.4 1 0 0 1 1 1 0 Site-specific recombinase ZZ PF00569.17 ORF124836 - 8.8e-13 47.9 5.1 1.6e-12 47.1 5.1 1.4 1 0 0 1 1 1 1 Zinc finger, ZZ type C1_2 PF03107.16 ORF124836 - 0.12 12.7 5.2 0.3 11.4 5.2 1.7 1 0 0 1 1 1 0 C1 domain zf-C3HC4_2 PF13923.6 ORF111855 - 2.8e-09 36.7 17.1 4.5e-09 36.0 17.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF111855 - 1e-07 31.8 11.5 1e-07 31.8 11.5 1.9 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF111855 - 3.3e-07 30.1 15.6 5.4e-07 29.4 15.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF111855 - 3.4e-07 30.5 15.4 5.4e-07 29.8 15.4 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF111855 - 9.9e-07 28.5 16.4 1.7e-06 27.8 16.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 ORF111855 - 7.9e-06 25.7 7.3 1.4e-05 24.8 7.3 1.3 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-RING_5 PF14634.6 ORF111855 - 0.0001 22.2 14.3 0.00018 21.4 14.3 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF111855 - 0.00023 21.3 16.6 0.00046 20.3 16.6 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING U-box PF04564.15 ORF111855 - 0.00061 19.9 0.0 0.0012 18.9 0.0 1.5 1 0 0 1 1 1 1 U-box domain zf-rbx1 PF12678.7 ORF111855 - 0.0031 17.8 7.7 0.0067 16.7 7.7 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain LON_substr_bdg PF02190.16 ORF111855 - 0.0048 16.8 1.0 0.0055 16.6 0.2 1.6 2 0 0 2 2 2 1 ATP-dependent protease La (LON) substrate-binding domain Prok-RING_4 PF14447.6 ORF111855 - 0.057 13.3 16.7 0.1 12.5 16.7 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_10 PF16685.5 ORF111855 - 0.063 13.4 12.4 0.12 12.6 12.4 1.4 1 0 0 1 1 1 0 zinc RING finger of MSL2 Hydrolase PF00702.26 ORF106887 - 4.5e-08 33.6 0.1 6.8e-08 33.1 0.1 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF106887 - 0.011 15.4 0.1 0.016 14.9 0.1 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase WES_acyltransf PF03007.16 ORF105973 - 2.3e-12 47.2 0.0 3.3e-12 46.7 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF1298 PF06974.13 ORF105973 - 1e-07 32.0 0.5 1.7e-07 31.3 0.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) VWA_3 PF13768.6 ORF10506 - 4.4e-15 55.9 0.1 7.2e-15 55.3 0.1 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF10506 - 2.4e-10 41.0 0.2 4.1e-10 40.2 0.2 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF10506 - 8.4e-07 29.4 0.0 1.3e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 ORF10506 - 1.5e-06 27.8 1.3 2.3e-06 27.2 1.3 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein MatE PF01554.18 ORF104719 - 3.5e-42 143.8 21.1 6.6e-27 94.1 9.1 3.0 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.6 ORF104719 - 9.3e-05 22.5 14.8 9.3e-05 22.5 14.8 3.7 1 1 2 3 3 3 1 Polysaccharide biosynthesis C-terminal domain Pox_A31 PF05771.11 ORF104719 - 0.39 10.7 4.7 3.8 7.6 0.1 2.3 2 0 0 2 2 2 0 Poxvirus A31 protein HipA_C PF07804.12 NODE_13538_length_1205_cov_3163.561538_g3406_i2reverse_frame_3 - 0.063 13.0 0.1 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 HipA-like C-terminal domain DotA PF11388.8 NODE_13538_length_1205_cov_3163.561538_g3406_i2forward_frame_3 - 1.7 8.9 4.3 0.39 10.9 0.2 2.1 3 0 0 3 3 3 0 Phagosome trafficking protein DotA NrfD PF03916.14 ORF98655 - 1.1e-18 68.0 21.9 2.1e-18 67.0 21.9 1.4 1 0 0 1 1 1 1 Polysulphide reductase, NrfD DnaJ PF00226.31 ORF98162 - 2.9e-23 81.8 1.2 1e-22 80.0 1.2 1.9 2 0 0 2 2 2 1 DnaJ domain DnaJ-X PF14308.6 ORF98162 - 8.1e-23 81.0 0.0 1.9e-22 79.8 0.0 1.6 1 1 0 1 1 1 1 X-domain of DnaJ-containing Pyrophosphatase PF00719.19 ORF97515 - 7.1e-45 152.7 0.1 1.5e-44 151.6 0.1 1.6 1 0 0 1 1 1 1 Inorganic pyrophosphatase 3Beta_HSD PF01073.19 ORF90303 - 3.2e-24 85.4 0.0 4.2e-24 85.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF90303 - 1e-22 80.8 0.0 1.7e-22 80.1 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF90303 - 2.7e-18 66.5 0.0 5.5e-18 65.5 0.0 1.4 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF90303 - 1.7e-13 50.4 0.0 2.6e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF90303 - 8.2e-11 42.1 0.0 1.3e-10 41.5 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF90303 - 2.4e-10 40.0 0.0 4e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF90303 - 0.00034 20.6 0.0 0.00072 19.5 0.0 1.5 1 1 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 ORF90303 - 0.011 14.8 0.0 0.022 13.9 0.0 1.5 1 1 0 1 1 1 0 RmlD substrate binding domain adh_short PF00106.25 ORF90303 - 0.012 15.0 0.0 0.046 13.2 0.0 1.8 2 0 0 2 2 2 0 short chain dehydrogenase DapB_N PF01113.20 ORF90303 - 0.059 13.5 0.1 0.92 9.6 0.0 2.2 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus NmrA PF05368.13 ORF90303 - 0.12 11.9 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 NmrA-like family Sacchrp_dh_NADP PF03435.18 ORF90303 - 0.15 12.3 0.0 0.67 10.2 0.0 2.0 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Abhydro_lipase PF04083.16 ORF86891 - 6.2e-18 64.1 0.0 1.2e-17 63.2 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF86891 - 1.3e-07 31.5 0.2 2.3e-07 30.8 0.2 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold DHHA2 PF02833.14 ORF84231 - 1.8e-16 60.6 0.1 4.5e-16 59.3 0.1 1.6 1 0 0 1 1 1 1 DHHA2 domain DHH PF01368.20 ORF84231 - 0.00041 20.5 3.7 0.0019 18.4 3.7 2.0 1 1 0 1 1 1 1 DHH family TPR_1 PF00515.28 ORF8145 - 4.1e-13 48.5 4.0 9.3e-07 28.4 0.0 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF8145 - 4.7e-12 45.1 8.5 5.6e-05 22.9 0.0 4.6 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF8145 - 2.3e-11 44.1 6.9 1e-06 29.3 0.5 4.9 3 1 2 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF8145 - 1.6e-08 34.7 12.2 3.8e-08 33.5 0.9 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF8145 - 8.2e-08 31.9 2.0 0.0043 17.2 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF8145 - 2.5e-05 23.9 1.7 0.68 9.7 0.0 3.5 3 0 0 3 3 3 2 TPR repeat TPR_7 PF13176.6 ORF8145 - 0.0002 21.2 9.0 0.11 12.6 0.0 4.5 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF8145 - 0.00028 21.3 12.4 0.00074 20.0 0.2 3.9 3 2 1 5 5 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF8145 - 0.00049 19.9 5.7 0.089 12.7 0.3 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF8145 - 0.0036 17.4 3.7 0.19 11.9 0.3 3.8 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF8145 - 0.0046 17.5 7.1 2.8 8.8 0.1 5.1 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF8145 - 0.0084 16.4 3.7 0.42 11.1 0.1 3.9 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF8145 - 0.019 15.5 4.3 11 7.0 0.0 5.1 4 0 0 4 4 4 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF8145 - 0.023 14.8 0.0 0.11 12.6 0.0 2.2 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat Rapsyn_N PF10579.9 ORF8145 - 0.027 14.6 0.1 1 9.5 0.0 2.9 1 1 1 2 2 2 0 Rapsyn N-terminal myristoylation and linker region ANAPC3 PF12895.7 ORF8145 - 0.031 14.5 2.1 0.031 14.5 2.1 2.9 2 1 1 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF8145 - 0.12 13.3 16.6 1.1 10.3 0.0 5.5 4 1 2 6 6 4 0 Tetratricopeptide repeat Cytochrom_B562 PF07361.11 ORF8145 - 0.13 12.9 3.4 0.18 12.5 0.0 2.9 4 1 1 5 5 5 0 Cytochrome b562 DUF4363 PF14276.6 ORF8145 - 1 9.5 3.9 2.9 8.1 0.1 3.0 3 1 1 4 4 4 0 Domain of unknown function (DUF4363) NOT2_3_5 PF04153.18 ORF67828 - 1.4e-18 67.3 1.2 1.4e-18 67.3 1.2 2.7 2 1 0 2 2 2 1 NOT2 / NOT3 / NOT5 family Lipoxygenase PF00305.19 ORF63496 - 2.9e-14 52.5 0.0 5.6e-14 51.5 0.0 1.4 1 1 0 1 1 1 1 Lipoxygenase Orn_Arg_deC_N PF02784.16 ORF60815 - 2.9e-73 246.3 0.0 3.6e-73 246.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DUF4091 PF13320.6 ORF60815 - 0.085 13.0 0.0 0.57 10.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4091) DEAD PF00270.29 ORF58552 - 4e-41 140.7 0.1 6.7e-41 140.0 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF58552 - 1.2e-31 109.3 0.1 2.9e-30 104.9 0.0 2.7 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF58552 - 1.2e-05 25.4 0.0 2.2e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 ORF58552 - 0.0087 16.4 0.0 2 8.7 0.0 2.5 2 1 0 2 2 2 2 AAA domain CMS1 PF14617.6 ORF58552 - 0.0097 15.3 0.1 0.081 12.2 0.0 2.1 2 0 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit DHHA2 PF02833.14 ORF58456 - 1.8e-16 60.6 0.1 4.5e-16 59.3 0.1 1.6 1 0 0 1 1 1 1 DHHA2 domain DHH PF01368.20 ORF58456 - 0.00041 20.5 3.7 0.0019 18.4 3.7 2.0 1 1 0 1 1 1 1 DHH family DUF1279 PF06916.13 ORF44682 - 0.25 11.9 1.0 0.64 10.6 1.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1279) WD40_3 PF15911.5 ORF39668 - 0.32 11.0 2.2 1.8 8.6 0.1 3.1 3 1 1 4 4 4 0 WD domain, G-beta repeat Vps23_core PF09454.10 ORF3814 - 6.1e-14 51.7 0.9 3.5e-13 49.3 0.1 2.4 2 0 0 2 2 2 1 Vps23 core domain UEV PF05743.13 ORF3814 - 1.6e-12 47.4 0.7 3e-12 46.5 0.7 1.5 1 0 0 1 1 1 1 UEV domain THOC7 PF05615.13 ORF3814 - 0.018 15.3 3.0 0.038 14.3 3.0 1.5 1 0 0 1 1 1 0 Tho complex subunit 7 Fusion_gly PF00523.18 ORF3814 - 0.028 12.7 2.1 0.03 12.6 0.4 2.0 2 0 0 2 2 2 0 Fusion glycoprotein F0 DUF2222 PF09984.9 ORF3814 - 0.032 14.1 0.8 0.078 12.9 0.8 1.6 1 0 0 1 1 1 0 Uncharacterised signal transduction histidine kinase domain (DUF2222) Osmo_CC PF08946.10 ORF3814 - 4.6 7.6 7.1 3.5 7.9 0.3 2.8 1 1 1 2 2 2 0 Osmosensory transporter coiled coil La PF05383.17 ORF36256 - 2.8e-15 56.1 0.0 6.6e-15 54.9 0.0 1.7 2 0 0 2 2 2 1 La domain AAA_33 PF13671.6 ORF36256 - 4.4e-15 56.1 5.3 6e-08 32.9 0.1 2.9 2 1 1 3 3 3 2 AAA domain KTI12 PF08433.10 ORF36256 - 0.00078 19.0 0.1 0.5 9.8 0.0 2.2 1 1 1 2 2 2 2 Chromatin associated protein KTI12 AAA_18 PF13238.6 ORF36256 - 0.0015 19.1 0.3 1.2 9.7 0.1 2.6 1 1 1 2 2 2 2 AAA domain AAA_28 PF13521.6 ORF36256 - 0.019 15.2 1.8 0.14 12.4 0.0 2.5 1 1 0 2 2 2 0 AAA domain AAA_22 PF13401.6 ORF36256 - 0.023 14.9 0.0 0.072 13.4 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 ORF36256 - 0.027 14.9 0.1 6.2 7.3 0.0 2.5 1 1 1 2 2 2 0 AAA domain Ploopntkinase3 PF18751.1 ORF36256 - 0.034 14.0 0.0 0.071 13.0 0.0 1.5 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_5 PF07728.14 ORF36256 - 0.13 12.3 0.1 0.36 10.8 0.1 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF36256 - 0.67 10.3 3.7 1 9.7 1.3 2.6 2 1 0 2 2 2 0 AAA ATPase domain Ribosomal_L20 PF00453.18 ORF36256 - 0.67 10.1 3.0 18 5.5 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein L20 DUF664 PF04978.12 ORF36256 - 1.3 9.5 7.8 0.49 10.8 1.4 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF664) PTR2 PF00854.21 ORF32716 - 8e-89 298.2 16.8 9.7e-89 297.9 16.8 1.1 1 0 0 1 1 1 1 POT family MFS_1 PF07690.16 ORF32716 - 2.5e-09 36.5 36.9 2.5e-09 36.5 36.9 3.2 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF4271 PF14093.6 ORF32716 - 0.067 13.1 0.1 0.067 13.1 0.1 4.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4271) DAO PF01266.24 ORF17641 - 1.9e-24 86.9 0.1 2.7e-24 86.4 0.1 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase XPC-binding PF09280.11 ORF17641 - 0.082 12.7 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 XPC-binding domain Sortilin_C PF15901.5 ORF1590 - 3.2e-40 138.3 6.2 4.1e-40 137.9 6.2 1.1 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal Sortilin-Vps10 PF15902.5 ORF1590 - 1.6e-25 89.8 0.3 2.2e-25 89.4 0.3 1.2 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, DnaJ PF00226.31 ORF148668 - 1.8e-05 24.8 0.0 1.8e-05 24.8 0.0 2.4 2 1 0 2 2 2 1 DnaJ domain DUF1541 PF07563.11 ORF148668 - 0.028 14.3 0.2 0.028 14.3 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1541) zf_PR_Knuckle PF18445.1 ORF148668 - 1.1 9.1 4.3 27 4.7 0.1 2.5 2 0 0 2 2 2 0 PR zinc knuckle motif Smr PF01713.21 ORF146619 - 5.6e-07 29.8 0.3 1.9e-06 28.1 0.0 2.1 2 0 0 2 2 2 1 Smr domain Enterotoxin_a PF01375.17 ORF136435 - 0.014 15.0 0.2 0.035 13.7 0.2 1.7 1 0 0 1 1 1 0 Heat-labile enterotoxin alpha chain Orn_Arg_deC_N PF02784.16 ORF127249 - 2.9e-73 246.3 0.0 3.6e-73 246.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DUF4091 PF13320.6 ORF127249 - 0.085 13.0 0.0 0.57 10.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4091) MRC1 PF09444.10 ORF111479 - 0.12 12.8 0.0 0.19 12.3 0.0 1.2 1 0 0 1 1 1 0 MRC1-like domain Asp PF00026.23 ORF111447 - 2.4e-05 23.9 0.2 0.0033 16.9 0.0 3.4 1 1 0 2 2 2 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 ORF111447 - 0.0014 19.2 0.3 0.64 10.7 0.0 3.1 2 1 0 2 2 2 2 Aspartyl protease Orn_Arg_deC_N PF02784.16 ORF1006 - 2.9e-73 246.3 0.0 3.6e-73 246.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DUF4091 PF13320.6 ORF1006 - 0.085 13.0 0.0 0.57 10.4 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4091) Pyrophosphatase PF00719.19 ORF90848 - 1.8e-43 148.1 0.2 3.1e-43 147.4 0.2 1.4 1 0 0 1 1 1 1 Inorganic pyrophosphatase Pyr_redox_2 PF07992.14 ORF89237 - 4.6e-52 177.1 0.0 5.6e-52 176.8 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 ORF89237 - 1.3e-21 76.9 0.1 3.2e-21 75.7 0.1 1.7 1 0 0 1 1 1 1 Reductase C-terminal Pyr_redox PF00070.27 ORF89237 - 7e-18 65.0 1.1 3.2e-15 56.4 0.1 2.7 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF89237 - 2e-09 36.7 6.5 0.0057 15.4 0.5 4.1 3 1 1 4 4 4 4 HI0933-like protein NAD_binding_8 PF13450.6 ORF89237 - 2e-07 31.1 0.5 0.0064 16.7 0.0 2.8 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 ORF89237 - 6.1e-07 28.8 1.8 0.1 11.6 0.5 3.1 3 0 0 3 3 3 2 Lycopene cyclase protein Pyr_redox_3 PF13738.6 ORF89237 - 1.4e-06 27.8 0.1 8.2e-05 22.0 0.1 2.6 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF89237 - 2.3e-06 27.0 0.1 0.077 12.1 0.0 2.9 2 1 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 ORF89237 - 4.2e-06 26.8 2.6 2.9 7.9 0.0 4.2 3 1 1 4 4 4 1 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 ORF89237 - 6.3e-06 26.6 0.1 0.027 14.9 0.3 3.0 2 1 1 3 3 3 2 Putative NAD(P)-binding DAO PF01266.24 ORF89237 - 5.7e-05 22.9 9.3 0.018 14.6 1.2 3.9 3 1 1 4 4 4 2 FAD dependent oxidoreductase Trp_halogenase PF04820.14 ORF89237 - 0.0026 16.7 6.3 0.096 11.5 0.1 3.1 3 0 0 3 3 3 1 Tryptophan halogenase GIDA PF01134.22 ORF89237 - 0.0027 16.8 1.9 0.93 8.5 0.8 2.6 2 1 0 2 2 2 2 Glucose inhibited division protein A 3HCDH_N PF02737.18 ORF89237 - 0.0098 15.8 0.1 0.0098 15.8 0.1 1.6 2 0 0 2 2 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Amino_oxidase PF01593.24 ORF89237 - 0.011 15.1 0.0 0.016 14.5 0.0 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase TrkA_N PF02254.18 ORF89237 - 0.013 15.7 5.3 0.076 13.3 0.2 3.1 3 0 0 3 3 3 0 TrkA-N domain Thi4 PF01946.17 ORF89237 - 0.014 14.7 0.9 0.42 9.8 0.1 3.0 3 0 0 3 3 3 0 Thi4 family 2-Hacid_dh_C PF02826.19 ORF89237 - 0.019 14.3 0.2 0.13 11.7 0.0 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF89237 - 0.039 14.0 2.2 4 7.5 0.1 2.5 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase XdhC_C PF13478.6 ORF89237 - 0.041 14.4 0.0 0.39 11.2 0.0 2.2 2 0 0 2 2 2 0 XdhC Rossmann domain FAD_binding_3 PF01494.19 ORF89237 - 0.056 12.7 2.5 2.8 7.1 0.0 2.5 2 1 0 3 3 3 0 FAD binding domain AlaDh_PNT_C PF01262.21 ORF89237 - 0.14 11.4 7.8 0.16 11.2 2.2 2.8 2 1 1 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 ORF89237 - 0.27 10.3 12.5 0.3 10.1 1.9 2.6 3 0 0 3 3 3 0 FAD binding domain Kinesin PF00225.23 ORF88404 - 4.1e-67 226.5 0.0 6.3e-67 225.9 0.0 1.3 1 0 0 1 1 1 1 Kinesin motor domain Abhydro_lipase PF04083.16 ORF7377 - 6.7e-18 64.0 0.0 1.3e-17 63.1 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF7377 - 0.00077 19.2 0.3 0.0014 18.4 0.1 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF49636 - 6.2e-18 64.1 0.0 1.2e-17 63.2 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF49636 - 1.3e-07 31.6 0.2 2.3e-07 30.8 0.2 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold IFT46_B_C PF12317.8 ORF48599 - 7.9e-79 264.3 2.3 7.9e-79 264.3 2.3 1.5 2 0 0 2 2 2 1 Intraflagellar transport complex B protein 46 C terminal Abhydrolase_1 PF00561.20 ORF47232 - 2.3e-16 60.2 0.2 2.6e-09 37.1 0.3 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF47232 - 2.3e-15 57.8 2.2 2.8e-15 57.5 1.0 1.7 2 0 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF47232 - 6.3e-12 45.3 0.0 2.3e-09 36.9 0.0 2.5 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF47232 - 0.0013 18.9 0.0 0.0027 17.8 0.0 1.5 1 0 0 1 1 1 1 TAP-like protein DLH PF01738.18 ORF47232 - 0.0041 16.7 0.0 0.088 12.3 0.0 2.3 2 0 0 2 2 2 1 Dienelactone hydrolase family Thioesterase PF00975.20 ORF47232 - 0.018 15.2 0.1 0.87 9.6 0.0 2.2 2 0 0 2 2 2 0 Thioesterase domain Sdh_cyt PF01127.22 ORF47232 - 0.031 14.3 0.1 0.14 12.2 0.1 2.1 1 1 1 2 2 2 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AXE1 PF05448.12 ORF47232 - 0.11 11.1 0.0 4.7 5.8 0.0 2.5 2 1 0 2 2 2 0 Acetyl xylan esterase (AXE1) Abhydro_lipase PF04083.16 ORF44574 - 2.7e-18 65.3 0.0 5.1e-18 64.4 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF44574 - 1.8e-06 27.8 0.0 2e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF38333 - 6.3e-18 64.1 0.0 1.2e-17 63.2 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF38333 - 1.3e-07 31.6 0.2 2.3e-07 30.8 0.2 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Pkinase PF00069.25 ORF33994 - 1e-69 234.9 0.0 1.7e-69 234.1 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33994 - 5.2e-38 130.8 0.0 7.6e-38 130.3 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF33994 - 1.4e-06 27.8 0.0 2.7e-05 23.6 0.0 2.4 2 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF33994 - 5.1e-05 22.7 0.0 0.00011 21.6 0.0 1.6 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF33994 - 0.00016 21.7 0.0 0.0013 18.7 0.0 1.9 1 1 0 2 2 2 1 Phosphotransferase enzyme family EF-hand_8 PF13833.6 ORF33994 - 0.001 18.9 0.1 0.0033 17.2 0.1 2.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF33994 - 0.0021 17.9 0.4 0.013 15.4 0.4 2.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF33994 - 0.0022 17.4 0.5 0.005 16.3 0.5 1.6 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF33994 - 0.01 16.3 0.4 0.04 14.4 0.1 2.2 2 0 0 2 2 2 0 EF-hand domain pair Choline_kinase PF01633.20 ORF33994 - 0.013 15.1 0.1 0.035 13.7 0.1 1.7 1 0 0 1 1 1 0 Choline/ethanolamine kinase EF-hand_1 PF00036.32 ORF33994 - 0.015 14.8 2.6 0.021 14.4 0.7 2.3 2 0 0 2 2 2 0 EF hand ABC1 PF03109.16 ORF33994 - 0.043 14.0 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 ABC1 family Abhydro_lipase PF04083.16 ORF30173 - 1.5e-19 69.3 0.0 2.9e-19 68.4 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF30173 - 6.2e-06 26.0 0.1 9.7e-06 25.4 0.1 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Vac7 PF12751.7 ORF30173 - 0.15 11.5 0.1 0.23 10.8 0.1 1.1 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 3Beta_HSD PF01073.19 ORF27546 - 9.2e-22 77.4 0.0 1.3e-21 76.8 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF27546 - 2.2e-20 73.2 0.1 5.6e-20 71.8 0.1 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF27546 - 2e-13 50.7 0.0 2.2e-12 47.2 0.0 2.1 1 1 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 ORF27546 - 3.4e-13 49.4 0.0 5.4e-13 48.7 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein GDP_Man_Dehyd PF16363.5 ORF27546 - 2.7e-10 40.2 0.1 6.4e-10 38.9 0.1 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 ORF27546 - 6.8e-07 28.7 0.0 1e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 ORF27546 - 8.8e-06 25.0 0.2 3.4e-05 23.1 0.1 1.9 2 0 0 2 2 2 1 RmlD substrate binding domain KR PF08659.10 ORF27546 - 0.00013 21.9 0.0 0.00034 20.6 0.0 1.7 1 1 0 1 1 1 1 KR domain NmrA PF05368.13 ORF27546 - 0.0085 15.7 0.0 0.023 14.3 0.0 1.7 2 0 0 2 2 2 1 NmrA-like family adh_short PF00106.25 ORF27546 - 0.061 12.8 0.0 0.99 8.8 0.0 2.7 3 1 0 3 3 3 0 short chain dehydrogenase Macro PF01661.21 ORF27546 - 0.074 13.1 0.2 0.18 11.8 0.1 1.7 1 1 0 1 1 1 0 Macro domain Semialdhyde_dh PF01118.24 ORF27546 - 0.092 13.2 0.0 0.21 12.0 0.0 1.7 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain SRP54_N PF02881.19 ORF27546 - 0.72 10.1 3.4 9.1 6.6 0.1 3.5 4 0 0 4 4 3 0 SRP54-type protein, helical bundle domain DNA_pol_alpha_N PF12254.8 ORF27546 - 8 6.6 10.2 10 6.3 3.0 2.7 2 0 0 2 2 2 0 DNA polymerase alpha subunit p180 N terminal Cyt-b5 PF00173.28 ORF25773 - 4.4e-16 58.8 0.0 8.6e-16 57.9 0.0 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ni_hydr_CYTB PF01292.20 ORF25773 - 1.4e-12 47.6 0.2 2.2e-12 47.0 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 ORF25773 - 0.013 15.6 0.2 0.044 13.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) DUF2231 PF09990.9 ORF25773 - 0.029 14.8 0.2 0.063 13.7 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Ferric_reduct PF01794.19 ORF25773 - 2.4 8.3 6.2 2.5 8.3 0.3 2.6 2 1 1 3 3 3 0 Ferric reductase like transmembrane component PCI PF01399.27 ORF21029 - 8e-13 48.8 0.0 1.8e-12 47.7 0.0 1.6 1 0 0 1 1 1 1 PCI domain TRP PF06011.12 ORF19699 - 0.0018 17.1 17.4 0.006 15.4 4.3 2.1 2 0 0 2 2 2 2 Transient receptor potential (TRP) ion channel EI24 PF07264.11 ORF19699 - 0.24 11.7 11.9 0.18 12.1 0.4 2.7 2 1 1 3 3 3 0 Etoposide-induced protein 2.4 (EI24) SIT PF15330.6 ORF19699 - 0.25 11.8 0.1 0.25 11.8 0.1 4.2 5 0 0 5 5 5 0 SHP2-interacting transmembrane adaptor protein, SIT FixQ PF05545.11 ORF19699 - 0.28 11.2 7.2 29 4.7 0.1 3.9 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ TMEM154 PF15102.6 ORF19699 - 0.3 11.0 0.1 0.3 11.0 0.1 3.8 3 2 0 4 4 4 0 TMEM154 protein family Cyt-b5 PF00173.28 ORF148057 - 4.4e-16 58.8 0.0 8.6e-16 57.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ni_hydr_CYTB PF01292.20 ORF148057 - 2.9e-12 46.6 0.2 4.4e-12 46.0 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 ORF148057 - 0.013 15.6 0.2 0.044 13.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) DUF2231 PF09990.9 ORF148057 - 0.028 14.8 0.2 0.063 13.7 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Ferric_reduct PF01794.19 ORF148057 - 2.6 8.2 6.3 2.5 8.3 0.3 2.6 2 1 1 3 3 3 0 Ferric reductase like transmembrane component Kinesin PF00225.23 ORF147529 - 4.1e-67 226.5 0.0 6.3e-67 225.9 0.0 1.3 1 0 0 1 1 1 1 Kinesin motor domain Cyt-b5 PF00173.28 ORF138601 - 4.4e-16 58.8 0.0 8.6e-16 57.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ni_hydr_CYTB PF01292.20 ORF138601 - 7e-13 48.6 0.2 1.1e-12 47.9 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 ORF138601 - 0.016 15.4 0.1 0.05 13.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) DUF2231 PF09990.9 ORF138601 - 0.025 15.0 0.2 0.054 13.9 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Cytochrom_B561 PF03188.16 ORF138601 - 0.039 14.1 0.3 0.059 13.5 0.3 1.3 1 0 0 1 1 1 0 Eukaryotic cytochrome b561 Ferric_reduct PF01794.19 ORF138601 - 2.4 8.3 5.9 3.2 7.9 0.3 2.6 2 1 1 3 3 3 0 Ferric reductase like transmembrane component Symplekin_C PF12295.8 ORF132524 - 2e-18 67.2 0.8 8.2e-13 48.9 0.0 2.7 2 1 1 3 3 3 2 Symplekin tight junction protein C terminal ANAPC4_WD40 PF12894.7 ORF128095 - 5.5e-05 23.4 0.4 0.14 12.5 0.0 3.8 3 1 2 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF128095 - 0.0031 18.3 0.0 3.1 8.8 0.0 2.8 1 1 1 2 2 2 2 WD domain, G-beta repeat DXP_reductoisom PF02670.16 ORF125627 - 6.9e-50 169.1 0.7 6.9e-50 169.1 0.7 1.6 2 0 0 2 2 2 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DXPR_C PF13288.6 ORF125627 - 8.6e-42 142.0 0.2 2.3e-41 140.7 0.2 1.8 1 0 0 1 1 1 1 DXP reductoisomerase C-terminal domain DXP_redisom_C PF08436.12 ORF125627 - 1.4e-36 124.5 0.0 3e-36 123.4 0.0 1.6 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Exc PF07825.11 ORF124129 - 0.0077 16.2 0.1 0.016 15.2 0.1 1.5 1 0 0 1 1 1 1 Excisionase-like protein EF-hand_7 PF13499.6 ORF124129 - 0.23 11.9 0.1 0.56 10.7 0.1 1.6 1 0 0 1 1 1 0 EF-hand domain pair Abhydro_lipase PF04083.16 ORF122038 - 7.1e-19 67.1 0.0 1.4e-18 66.2 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF122038 - 1.1e-06 28.5 0.3 1.9e-06 27.7 0.1 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF122038 - 0.068 12.4 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 CPSase_L_D2 PF02786.17 ORF121066 - 3.6e-05 23.4 0.0 0.073 12.6 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.6 ORF121066 - 0.00087 18.9 0.1 0.014 15.0 0.0 2.6 2 1 0 2 2 2 1 ATP-grasp domain DUF2791 PF10923.8 ORF121066 - 0.037 12.9 0.0 0.067 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) Abhydro_lipase PF04083.16 ORF118265 - 2.3e-19 68.7 0.0 4.2e-19 67.9 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF118265 - 6.4e-06 26.0 1.4 1.4e-05 24.9 1.4 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF118265 - 0.0057 15.9 0.0 0.0084 15.4 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 TMEM154 PF15102.6 ORF115268 - 0.024 14.6 1.2 0.024 14.6 1.2 2.6 2 1 1 3 3 3 0 TMEM154 protein family Abhydro_lipase PF04083.16 ORF112188 - 9.7e-20 69.9 0.0 1.8e-19 69.1 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF112188 - 1.2e-07 31.7 0.1 1.7e-07 31.2 0.1 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Cyt-b5 PF00173.28 ORF111952 - 4.5e-16 58.8 0.0 8.6e-16 57.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ni_hydr_CYTB PF01292.20 ORF111952 - 1.8e-12 47.2 0.2 2.8e-12 46.6 0.2 1.2 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4079 PF13301.6 ORF111952 - 0.015 15.5 0.2 0.044 13.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) DUF2231 PF09990.9 ORF111952 - 0.028 14.9 0.2 0.063 13.7 0.2 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Ferric_reduct PF01794.19 ORF111952 - 3.2 7.9 6.4 2.5 8.3 0.3 2.6 2 1 1 3 3 3 0 Ferric reductase like transmembrane component Neur_chan_memb PF02932.16 ORF108811 - 4.8 7.2 7.0 1.7 8.6 3.6 1.8 2 0 0 2 2 2 0 Neurotransmitter-gated ion-channel transmembrane region MORN PF02493.20 ORF106949 - 4.5e-51 167.8 87.7 4.9e-07 29.3 1.2 10.6 11 0 0 11 11 11 9 MORN repeat IQ PF00612.27 ORF106949 - 3.6e-05 23.2 0.0 7.8e-05 22.1 0.0 1.6 1 0 0 1 1 1 1 IQ calmodulin-binding motif N_NLPC_P60 PF12912.7 ORF100627 - 0.0047 17.3 0.1 0.011 16.1 0.1 1.6 1 0 0 1 1 1 1 NLPC_P60 stabilising domain, N term SURF2 PF05477.11 ORF100627 - 2.1 8.0 6.6 1.7 8.3 5.0 1.6 2 0 0 2 2 2 0 Surfeit locus protein 2 (SURF2) Presenilin PF01080.17 ORF100627 - 2.7 6.7 6.6 3.6 6.3 6.6 1.1 1 0 0 1 1 1 0 Presenilin SAPIS-gp6 PF16722.5 NODE_13717_length_1198_cov_149.327601_g10281_i0reverse_frame_3 - 0.58 10.6 15.5 0.21 12.0 11.7 2.2 1 1 1 2 2 2 0 Pathogenicity island protein gp6 in Staphylococcus zf-RRN7 PF11781.8 NODE_13717_length_1198_cov_149.327601_g10281_i0forward_frame_2 - 0.017 14.8 0.4 0.06 13.0 0.4 2.0 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Pkinase PF00069.25 ORF9424 - 8e-67 225.4 0.0 1.2e-66 224.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9424 - 3.5e-39 134.7 0.0 5.7e-39 134.0 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF9424 - 3.7e-07 29.8 0.0 9e-07 28.5 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF9424 - 4.3e-05 23.0 0.0 8e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF9424 - 0.00039 19.3 0.0 0.0016 17.3 0.0 1.8 2 0 0 2 2 2 1 Fungal protein kinase Choline_kinase PF01633.20 ORF9424 - 0.0016 18.1 0.9 0.01 15.4 0.9 2.2 1 1 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 ORF9424 - 0.085 12.8 0.0 0.28 11.0 0.0 1.7 2 1 0 2 2 2 0 Phosphotransferase enzyme family DUF3539 PF12058.8 ORF84900 - 5.6 7.2 5.9 13 6.0 5.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3539) Uds1 PF15456.6 ORF78942 - 0.0071 16.5 0.7 0.017 15.3 0.7 1.6 1 0 0 1 1 1 1 Up-regulated During Septation Ribosomal_60s PF00428.19 ORF78942 - 0.0075 16.8 4.0 0.023 15.3 4.0 1.8 1 0 0 1 1 1 1 60s Acidic ribosomal protein DUF760 PF05542.11 ORF78942 - 0.17 12.2 0.0 0.98 9.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF760) ApoO PF09769.9 ORF69181 - 0.042 13.8 0.9 0.042 13.8 0.9 2.1 2 0 0 2 2 2 0 Apolipoprotein O DUF4407 PF14362.6 ORF69181 - 0.16 11.3 14.2 0.061 12.7 11.4 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) KLRAQ PF10205.9 ORF69181 - 1.6 9.0 15.8 1 9.6 4.5 3.4 2 1 0 3 3 3 0 Predicted coiled-coil domain-containing protein DUF4419 PF14388.6 ORF63948 - 1e-94 317.4 0.0 1.2e-94 317.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) EphA2_TM PF14575.6 ORF63618 - 1.7 9.6 4.4 1.2 10.1 0.7 2.5 2 2 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Pkinase PF00069.25 ORF62386 - 4.9e-64 216.2 0.4 4.9e-64 216.2 0.4 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62386 - 7.4e-39 133.6 0.1 1e-38 133.1 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF62386 - 4.5e-05 22.4 0.1 0.00017 20.5 0.0 1.8 2 0 0 2 2 2 1 Fungal protein kinase Kinase-like PF14531.6 ORF62386 - 0.0012 18.2 0.0 0.0062 15.9 0.0 2.0 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF62386 - 0.08 12.3 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF62386 - 0.2 11.5 0.0 0.3 11.0 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4419 PF14388.6 ORF62242 - 1e-94 317.4 0.0 1.2e-94 317.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) Pkinase PF00069.25 ORF58892 - 2e-51 174.9 0.0 3.6e-51 174.1 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58892 - 4.8e-19 68.6 0.0 7.2e-19 68.1 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF58892 - 1.8e-10 39.6 0.3 2.3e-06 26.7 0.9 2.8 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF58892 - 2.7e-10 39.3 0.5 0.00019 21.1 0.1 2.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF58892 - 1.7e-08 34.8 2.9 3.2e-08 33.9 0.7 2.4 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF58892 - 2.4e-07 30.5 2.7 2.3e-06 27.4 0.9 2.7 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF58892 - 6.1e-07 28.7 0.1 0.00034 20.0 0.3 2.5 2 0 0 2 2 2 2 EF hand Kinase-like PF14531.6 ORF58892 - 2.8e-06 26.9 0.1 5.9e-06 25.8 0.0 1.6 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF58892 - 0.0017 17.7 0.0 0.0029 17.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF58892 - 0.019 14.9 0.0 0.041 13.8 0.0 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family SPARC_Ca_bdg PF10591.9 ORF58892 - 0.15 12.4 0.6 0.87 9.9 0.1 2.5 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region DUF4203 PF13886.6 ORF5528 - 2.8e-27 95.7 40.8 2.8e-27 95.7 40.8 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4203) ATG27 PF09451.10 ORF5528 - 0.16 11.8 3.4 0.35 10.7 3.3 1.8 1 1 0 1 1 1 0 Autophagy-related protein 27 YfhO PF09586.10 ORF5528 - 0.29 9.3 19.9 0.45 8.7 19.9 1.3 1 0 0 1 1 1 0 Bacterial membrane protein YfhO Aldedh PF00171.22 ORF54776 - 1.5e-152 508.4 0.0 1.7e-152 508.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Ion_trans PF00520.31 ORF48718 - 3e-17 62.7 9.6 3.9e-17 62.3 9.6 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF48718 - 2.8e-11 42.4 0.0 2.1e-05 24.1 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF48718 - 5.1e-11 41.3 0.2 1.7e-05 24.0 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF48718 - 2.2e-07 31.2 0.1 4.4e-07 30.3 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF48718 - 1.7e-06 27.2 0.2 0.0067 15.9 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_4 PF12763.7 ORF48718 - 0.0052 16.7 0.4 1.1 9.3 0.1 2.4 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand DUF1073 PF06381.11 ORF48718 - 0.11 11.3 0.8 0.64 8.7 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1073) DUF5090 PF17009.5 ORF48718 - 2.2 8.2 8.2 2.7 7.9 3.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5090) PKD_channel PF08016.12 ORF48718 - 3 6.4 9.8 33 3.0 9.8 2.0 1 1 0 1 1 1 0 Polycystin cation channel DUF4419 PF14388.6 ORF4739 - 1e-94 317.4 0.0 1.2e-94 317.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) DUF4419 PF14388.6 ORF45029 - 1e-94 317.4 0.0 1.2e-94 317.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) Pkinase PF00069.25 ORF44843 - 4.9e-64 216.2 0.4 4.9e-64 216.2 0.4 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44843 - 7.4e-39 133.6 0.1 1e-38 133.1 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF44843 - 4.5e-05 22.4 0.1 0.00017 20.5 0.0 1.8 2 0 0 2 2 2 1 Fungal protein kinase Kinase-like PF14531.6 ORF44843 - 0.0012 18.2 0.0 0.0062 15.9 0.0 2.0 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF44843 - 0.08 12.3 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF44843 - 0.2 11.5 0.0 0.3 11.0 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Abhydrolase_1 PF00561.20 ORF43716 - 8.4e-11 42.0 0.0 3.2e-08 33.5 0.0 2.3 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF43716 - 3.3e-08 33.1 0.0 4.3e-08 32.7 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF676 PF05057.14 ORF43716 - 0.00081 19.0 0.0 0.0013 18.3 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF915 PF06028.11 ORF43716 - 0.0079 15.6 0.1 0.02 14.2 0.0 1.7 1 1 1 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) LIDHydrolase PF10230.9 ORF43716 - 0.0082 15.7 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Cutinase PF01083.22 ORF43716 - 0.015 15.3 0.0 0.022 14.7 0.0 1.3 1 0 0 1 1 1 0 Cutinase DUF900 PF05990.12 ORF43716 - 0.12 11.9 0.0 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) DUF3530 PF12048.8 ORF43716 - 0.18 11.2 0.0 0.94 8.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3530) Ank_2 PF12796.7 ORF37372 - 2.4e-43 146.6 4.2 2.1e-09 37.8 0.0 5.7 1 1 5 6 6 6 6 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF37372 - 1.1e-31 108.8 7.7 4.8e-09 36.6 0.0 7.4 4 3 3 7 7 7 7 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF37372 - 1.1e-25 89.3 8.5 8.6e-10 38.7 0.1 6.5 4 3 4 8 8 8 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF37372 - 1.6e-24 85.2 5.1 3.3e-05 24.1 0.1 8.7 10 0 0 10 10 10 6 Ankyrin repeat Ank_3 PF13606.6 ORF37372 - 3.4e-22 76.1 5.5 0.0002 21.5 0.1 8.9 10 0 0 10 10 10 5 Ankyrin repeat DUF4419 PF14388.6 ORF35879 - 1e-94 317.4 0.0 1.2e-94 317.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) WD40 PF00400.32 ORF3566 - 5.4e-18 65.0 7.0 0.015 16.1 0.0 6.9 7 0 0 7 7 7 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF3566 - 1.2e-10 41.5 1.2 0.00011 22.4 0.0 5.1 3 1 3 6 6 6 3 Anaphase-promoting complex subunit 4 WD40 domain Lactonase PF10282.9 ORF3566 - 0.0015 17.9 0.1 0.0025 17.2 0.1 1.4 1 0 0 1 1 1 1 Lactonase, 7-bladed beta-propeller Nucleoporin_N PF08801.11 ORF3566 - 0.0021 16.9 0.3 0.12 11.1 0.1 3.0 2 1 0 3 3 3 1 Nup133 N terminal like Ge1_WD40 PF16529.5 ORF3566 - 0.0056 15.7 0.1 1.2 8.0 0.1 2.9 3 0 0 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein BBS2_Mid PF14783.6 ORF3566 - 0.058 13.4 0.1 22 5.2 0.0 3.0 1 1 1 2 2 2 0 Ciliary BBSome complex subunit 2, middle region PSI_PsaF PF02507.15 ORF34593 - 0.06 13.2 0.2 0.54 10.1 0.1 2.4 3 0 0 3 3 3 0 Photosystem I reaction centre subunit III RRM_1 PF00076.22 ORF32140 - 5.4e-28 96.6 0.2 7.3e-14 51.3 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 ORF32140 - 1e-09 38.3 7.2 2.1e-09 37.3 7.2 1.5 1 0 0 1 1 1 1 WW domain RRM_7 PF16367.5 ORF32140 - 0.0015 18.6 0.1 0.52 10.5 0.0 2.7 2 1 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 ORF32140 - 0.043 13.8 0.1 4.5 7.4 0.0 2.4 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif RNA_bind PF08675.11 ORF32140 - 0.066 13.2 0.1 0.33 11.0 0.0 2.1 2 0 0 2 2 2 0 RNA binding domain DUF4419 PF14388.6 ORF25273 - 1e-94 317.4 0.0 1.2e-94 317.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4419) adh_short_C2 PF13561.6 ORF24859 - 1.3e-54 185.3 0.0 1.7e-54 184.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF24859 - 8e-44 149.4 0.0 1.2e-43 148.9 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF24859 - 1.1e-07 31.9 0.0 2.1e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 KR domain UCH PF00443.29 ORF19444 - 2.4e-26 92.8 7.0 3.7e-26 92.2 7.0 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase NPR3 PF03666.13 ORF19444 - 9.4 4.9 18.6 14 4.3 18.6 1.3 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Helicase_C PF00271.31 ORF19186 - 1.6e-12 47.7 0.0 3.4e-12 46.7 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain dsrm PF00035.26 ORF19186 - 7.2e-06 26.6 0.0 2.3e-05 25.0 0.0 2.0 1 0 0 1 1 1 1 Double-stranded RNA binding motif Thioredoxin_8 PF13905.6 ORF19186 - 0.0077 16.5 0.0 0.017 15.5 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like Dicer_dimer PF03368.14 ORF19186 - 0.091 12.9 0.1 1.2 9.3 0.0 2.5 3 0 0 3 3 3 0 Dicer dimerisation domain U-box PF04564.15 ORF17751 - 3.7e-14 52.7 0.0 7.2e-14 51.7 0.0 1.4 1 0 0 1 1 1 1 U-box domain zf-NOSIP PF15906.5 ORF17751 - 0.0046 17.1 0.0 0.0089 16.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein Dehydrin PF00257.19 ORF17751 - 0.038 14.6 3.1 0.077 13.6 3.1 1.6 1 0 0 1 1 1 0 Dehydrin zf-Nse PF11789.8 ORF17751 - 0.038 13.8 0.0 0.08 12.8 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit ubiquitin PF00240.23 ORF150028 - 5.8e-27 93.2 0.2 4.6e-11 42.3 0.1 3.2 3 0 0 3 3 3 3 Ubiquitin family Rad60-SLD PF11976.8 ORF150028 - 3.4e-07 30.0 0.0 0.025 14.4 0.0 3.2 3 0 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF150028 - 0.0031 17.9 0.1 0.31 11.5 0.1 2.8 2 1 0 2 2 2 1 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF150028 - 0.063 13.2 0.2 1.4 8.9 0.3 2.2 2 0 0 2 2 2 0 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF150028 - 0.069 13.5 0.1 1.2 9.6 0.0 2.6 2 1 1 3 3 3 0 Ubiquitin-like domain Glyco_hyd_65N_2 PF14498.6 ORF150028 - 0.16 11.8 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain PAP_central PF04928.17 ORF14656 - 6.4e-82 274.3 0.1 9.5e-82 273.7 0.1 1.2 1 0 0 1 1 1 1 Poly(A) polymerase central domain PAP_RNA-bind PF04926.15 ORF14656 - 1.9e-20 73.2 0.0 5.9e-14 52.1 0.0 2.4 1 1 1 2 2 2 2 Poly(A) polymerase predicted RNA binding domain Nrap_D2 PF17403.2 ORF14656 - 0.00011 22.0 0.0 0.00023 20.9 0.0 1.5 1 0 0 1 1 1 1 Nrap protein PAP/OAS-like domain DUF2240 PF09999.9 ORF14656 - 0.12 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) Pkinase PF00069.25 ORF140328 - 4.9e-64 216.2 0.4 4.9e-64 216.2 0.4 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF140328 - 7.4e-39 133.6 0.1 1e-38 133.1 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF140328 - 4.5e-05 22.4 0.1 0.00017 20.5 0.0 1.8 2 0 0 2 2 2 1 Fungal protein kinase Kinase-like PF14531.6 ORF140328 - 0.0012 18.2 0.0 0.0062 15.9 0.0 2.0 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF140328 - 0.08 12.3 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF140328 - 0.2 11.5 0.0 0.3 11.0 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family PCI PF01399.27 ORF135204 - 1.1e-13 51.6 1.6 1.4e-13 51.2 0.2 1.9 2 0 0 2 2 2 1 PCI domain CSN4_RPN5_eIF3a PF18420.1 ORF135204 - 0.00096 19.3 0.1 0.0027 17.8 0.1 1.8 1 0 0 1 1 1 1 CSN4/RPN5/eIF3a helix turn helix domain DUF3410 PF11890.8 ORF135204 - 0.057 13.2 0.3 0.16 11.8 0.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) Ion_trans PF00520.31 ORF126135 - 7.7e-21 74.4 24.0 9.9e-21 74.1 24.0 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF126135 - 0.024 14.5 0.4 0.069 13.1 0.4 1.8 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 ORF126135 - 0.09 13.2 0.0 0.21 12.1 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair DUF3539 PF12058.8 ORF113240 - 5.6 7.2 5.9 13 6.0 5.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3539) zf-RING_2 PF13639.6 ORF107156 - 1.2e-12 47.9 8.7 1.9e-12 47.3 6.5 2.4 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF107156 - 3.9e-10 39.3 5.8 2.7e-09 36.6 3.2 2.9 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF107156 - 1.7e-08 34.6 5.4 5.6e-08 33.0 5.4 1.9 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF107156 - 3.1e-08 33.4 6.9 3.1e-08 33.4 6.9 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF107156 - 3.6e-08 33.3 4.2 1e-07 31.8 4.2 1.9 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF107156 - 5.3e-08 32.6 6.5 5.3e-08 32.6 6.5 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF107156 - 1.1e-05 25.3 4.9 1.1e-05 25.3 4.9 1.9 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF107156 - 2.4e-05 24.1 4.4 7.9e-05 22.4 4.4 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF107156 - 2.7e-05 24.1 2.0 6.7e-05 22.9 2.0 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF107156 - 0.0017 18.5 5.2 0.014 15.5 5.2 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF107156 - 0.0032 17.1 4.7 0.026 14.1 5.0 2.3 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF107156 - 0.01 15.7 6.6 0.16 11.8 6.7 2.5 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_5 PF17121.5 ORF107156 - 0.014 15.2 4.2 0.051 13.5 4.2 2.0 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Baculo_RING PF05883.11 ORF107156 - 0.016 15.2 1.3 0.034 14.1 1.3 1.5 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Prok-RING_1 PF14446.6 ORF107156 - 0.031 14.2 3.8 0.067 13.1 0.8 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 RINGv PF12906.7 ORF107156 - 0.045 13.9 4.6 0.14 12.3 4.6 1.9 1 0 0 1 1 1 0 RING-variant domain zf-Di19 PF05605.12 ORF107156 - 0.061 13.6 3.6 6.9 7.0 0.6 3.3 2 1 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DUF3074 PF11274.8 ORF107156 - 0.14 12.2 0.3 0.21 11.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3074) zf-Nse PF11789.8 ORF107156 - 0.18 11.7 7.0 0.75 9.7 4.8 2.5 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_4 PF14570.6 ORF107156 - 0.55 10.1 4.8 1.8 8.4 4.8 1.9 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain PolC_DP2 PF03833.13 ORF98385 - 0.18 9.7 0.0 0.23 9.3 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 PDEase_I PF00233.19 ORF97930 - 7.3e-66 222.3 8.9 1.2e-65 221.6 8.9 1.3 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase VPS9 PF02204.18 ORF97930 - 0.031 14.5 0.3 0.068 13.4 0.3 1.6 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain CRAL_TRIO PF00650.20 ORF96412 - 6.3e-21 74.7 0.2 1.1e-20 73.9 0.2 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain TMEM154 PF15102.6 ORF92605 - 5.1 7.0 18.6 6.6 6.6 1.0 4.5 4 1 0 4 4 4 0 TMEM154 protein family DUF2500 PF10694.9 ORF92605 - 6.5 7.3 15.1 0.19 12.3 1.1 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF2500) zf-C2HC_2 PF13913.6 ORF92 - 6.3e-48 159.9 31.2 2.2e-10 40.2 0.8 6.5 7 0 0 7 7 7 6 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF92 - 1.5e-07 31.7 29.1 0.018 15.8 1.0 7.0 6 1 0 6 6 6 3 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF92 - 1.1e-06 28.7 22.1 0.0062 16.9 0.5 6.9 7 0 0 7 7 6 2 Zinc finger, C2H2 type zf-CpG_bind_C PF12269.8 ORF92 - 0.00012 22.0 15.2 0.019 14.8 0.2 5.6 3 1 3 6 6 6 1 CpG binding protein zinc finger C terminal domain OrsD PF12013.8 ORF92 - 0.002 18.6 0.4 23 5.5 0.0 4.9 5 0 0 5 5 5 0 Orsellinic acid/F9775 biosynthesis cluster protein D c-SKI_SMAD_bind PF08782.10 ORF92 - 0.002 18.3 10.8 6.9 7.0 0.1 5.0 5 1 1 6 6 5 1 c-SKI Smad4 binding domain zf-FPG_IleRS PF06827.14 ORF92 - 0.0031 17.3 11.4 0.79 9.6 0.6 3.9 3 0 0 3 3 3 2 Zinc finger found in FPG and IleRS DUF2318 PF10080.9 ORF92 - 0.0046 17.0 14.2 8.3 6.6 0.1 5.7 5 1 1 6 6 6 1 Predicted membrane protein (DUF2318) zf-dskA_traR PF01258.17 ORF92 - 0.0069 16.3 1.1 6.7 6.8 0.0 3.2 2 0 0 2 2 2 2 Prokaryotic dksA/traR C4-type zinc finger Rad50_zn_hook PF04423.14 ORF92 - 0.014 15.2 6.6 0.2 11.5 0.0 4.9 5 0 0 5 5 5 0 Rad50 zinc hook motif Sgf11 PF08209.11 ORF92 - 0.018 14.6 17.3 1.1 8.9 0.2 5.1 6 0 0 6 6 6 0 Sgf11 (transcriptional regulation protein) zf-RING_7 PF02591.15 ORF92 - 0.022 14.9 1.6 8.5 6.7 0.0 3.8 3 0 0 3 3 3 0 C4-type zinc ribbon domain LIAS_N PF16881.5 ORF92 - 0.034 14.5 0.6 3.1 8.3 0.0 3.0 3 0 0 3 3 3 0 N-terminal domain of lipoyl synthase of Radical_SAM family zf_UBZ PF18439.1 ORF92 - 0.064 12.9 13.9 2.8 7.6 0.0 4.7 6 0 0 6 6 5 0 Ubiquitin-Binding Zinc Finger TRAF6_Z2 PF18048.1 ORF92 - 0.077 13.1 2.1 0.58 10.3 0.1 3.3 3 1 1 4 4 3 0 TNF receptor-associated factor 6 zinc finger 2 zf-U11-48K PF05253.12 ORF92 - 0.22 11.5 5.8 31 4.6 0.0 5.0 5 0 0 5 5 5 0 U11-48K-like CHHC zinc finger zf-CSL PF05207.13 ORF92 - 0.47 10.2 7.7 17 5.2 0.2 3.8 3 1 0 3 3 3 0 CSL zinc finger DUF35_N PF12172.8 ORF92 - 1.7 8.6 8.5 19 5.2 0.2 3.6 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF4428 PF14471.6 ORF92 - 8.5 6.4 10.8 22 5.1 0.4 4.4 3 1 1 4 4 4 0 Domain of unknown function (DUF4428) RRM_1 PF00076.22 ORF91880 - 8.1e-21 73.6 0.0 2.5e-09 36.8 0.0 3.2 3 0 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RBM39linker PF15519.6 ORF91880 - 7e-05 23.8 0.0 0.00019 22.5 0.0 1.7 1 0 0 1 1 1 1 linker between RRM2 and RRM3 domains in RBM39 protein RRM_3 PF08777.11 ORF91880 - 0.0031 17.5 0.0 0.014 15.4 0.0 2.0 2 0 0 2 2 2 1 RNA binding motif Nup35_RRM_2 PF14605.6 ORF91880 - 0.0081 16.1 0.1 3.9 7.6 0.0 3.2 3 0 0 3 3 3 1 Nup53/35/40-type RNA recognition motif DUF1866 PF08952.11 ORF91880 - 0.08 12.8 0.0 7.9 6.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1866) Sugar_tr PF00083.24 ORF87883 - 4.8e-81 272.9 25.4 5.4e-81 272.8 25.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF87883 - 9.8e-14 51.0 16.9 9.8e-14 51.0 16.9 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily Wzy_C PF04932.15 ORF87883 - 0.0023 17.6 0.5 0.0023 17.6 0.5 3.2 2 2 0 3 3 3 1 O-Antigen ligase Phage_holin_3_2 PF04550.12 ORF87883 - 3.1 8.4 8.8 1.4 9.5 4.4 2.6 2 1 0 2 2 2 0 Phage holin family 2 TPR_2 PF07719.17 ORF86012 - 2.1e-06 27.4 1.5 0.033 14.3 0.2 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF86012 - 7.1e-05 22.7 0.2 0.01 16.0 0.1 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF86012 - 0.0022 17.7 0.5 3.1 7.8 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF86012 - 0.02 15.0 0.2 1 9.5 0.1 2.4 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_9 PF13371.6 ORF86012 - 0.2 11.8 6.5 0.038 14.1 2.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF4834 PF16118.5 ORF79501 - 0.025 15.6 0.0 0.062 14.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) ABC2_membrane_3 PF12698.7 ORF79501 - 0.15 11.2 0.8 0.25 10.4 0.8 1.4 1 1 0 1 1 1 0 ABC-2 family transporter protein Arrestin_C PF02752.22 ORF79165 - 7.5e-07 29.7 0.0 1.8e-06 28.4 0.0 1.7 2 0 0 2 2 2 1 Arrestin (or S-antigen), C-terminal domain PhoU PF01895.19 ORF78144 - 0.18 12.3 2.6 3.6 8.1 0.1 2.8 2 0 0 2 2 2 0 PhoU domain PDZ_6 PF17820.1 ORF74183 - 4.6e-06 26.4 0.0 2e-05 24.3 0.0 2.0 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF74183 - 0.00066 20.0 0.0 0.0016 18.8 0.0 1.6 1 0 0 1 1 1 1 PDZ domain zf-C2HC_2 PF13913.6 ORF70488 - 6.3e-48 159.9 31.2 2.2e-10 40.2 0.8 6.5 7 0 0 7 7 7 6 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF70488 - 1.5e-07 31.7 29.1 0.018 15.8 1.0 7.0 6 1 0 6 6 6 3 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF70488 - 1.1e-06 28.7 22.1 0.0062 16.9 0.5 6.9 7 0 0 7 7 6 2 Zinc finger, C2H2 type zf-CpG_bind_C PF12269.8 ORF70488 - 0.00012 22.0 15.2 0.019 14.8 0.2 5.6 3 1 3 6 6 6 1 CpG binding protein zinc finger C terminal domain OrsD PF12013.8 ORF70488 - 0.002 18.6 0.4 23 5.5 0.0 4.9 5 0 0 5 5 5 0 Orsellinic acid/F9775 biosynthesis cluster protein D c-SKI_SMAD_bind PF08782.10 ORF70488 - 0.002 18.3 10.8 6.9 7.0 0.1 5.0 5 1 1 6 6 5 1 c-SKI Smad4 binding domain zf-FPG_IleRS PF06827.14 ORF70488 - 0.0031 17.3 11.4 0.79 9.6 0.6 3.9 3 0 0 3 3 3 2 Zinc finger found in FPG and IleRS DUF2318 PF10080.9 ORF70488 - 0.0046 17.0 14.2 8.3 6.6 0.1 5.7 5 1 1 6 6 6 1 Predicted membrane protein (DUF2318) zf-dskA_traR PF01258.17 ORF70488 - 0.0069 16.3 1.1 6.7 6.8 0.0 3.2 2 0 0 2 2 2 2 Prokaryotic dksA/traR C4-type zinc finger Rad50_zn_hook PF04423.14 ORF70488 - 0.014 15.2 6.6 0.2 11.5 0.0 4.9 5 0 0 5 5 5 0 Rad50 zinc hook motif Sgf11 PF08209.11 ORF70488 - 0.018 14.6 17.3 1.1 8.9 0.2 5.1 6 0 0 6 6 6 0 Sgf11 (transcriptional regulation protein) zf-RING_7 PF02591.15 ORF70488 - 0.022 14.9 1.6 8.5 6.7 0.0 3.8 3 0 0 3 3 3 0 C4-type zinc ribbon domain LIAS_N PF16881.5 ORF70488 - 0.034 14.5 0.6 3.1 8.3 0.0 3.0 3 0 0 3 3 3 0 N-terminal domain of lipoyl synthase of Radical_SAM family zf_UBZ PF18439.1 ORF70488 - 0.064 12.9 13.9 2.8 7.6 0.0 4.7 6 0 0 6 6 5 0 Ubiquitin-Binding Zinc Finger TRAF6_Z2 PF18048.1 ORF70488 - 0.077 13.1 2.1 0.58 10.3 0.1 3.3 3 1 1 4 4 3 0 TNF receptor-associated factor 6 zinc finger 2 zf-U11-48K PF05253.12 ORF70488 - 0.22 11.5 5.8 31 4.6 0.0 5.0 5 0 0 5 5 5 0 U11-48K-like CHHC zinc finger zf-CSL PF05207.13 ORF70488 - 0.47 10.2 7.7 17 5.2 0.2 3.8 3 1 0 3 3 3 0 CSL zinc finger DUF35_N PF12172.8 ORF70488 - 1.7 8.6 8.5 19 5.2 0.2 3.6 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF4428 PF14471.6 ORF70488 - 8.5 6.4 10.8 22 5.1 0.4 4.4 3 1 1 4 4 4 0 Domain of unknown function (DUF4428) EP400_N PF15790.5 ORF58050 - 0.0043 16.0 7.8 0.35 9.6 1.0 2.5 2 0 0 2 2 2 2 E1A-binding protein p400, N-terminal HAP2-GCS1 PF10699.9 ORF58050 - 0.21 11.6 1.6 28 4.8 0.1 2.8 2 0 0 2 2 2 0 Male gamete fusion factor Sugar_tr PF00083.24 ORF57144 - 1.2e-79 268.3 24.9 1.3e-79 268.2 24.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF57144 - 1.2e-11 44.2 49.7 7.3e-11 41.6 25.7 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily Wzy_C PF04932.15 ORF57144 - 0.0023 17.6 0.5 0.0023 17.6 0.5 3.4 2 2 0 3 3 3 1 O-Antigen ligase Phage_holin_3_2 PF04550.12 ORF57144 - 0.31 11.6 4.4 1.4 9.5 4.4 2.2 1 0 0 1 1 1 0 Phage holin family 2 DUF1825 PF08855.10 ORF51539 - 0.076 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) Tachystatin_B PF11478.8 ORF50772 - 0.89 9.6 4.3 25 4.9 0.1 2.8 2 0 0 2 2 2 0 Antimicrobial chitin binding protein tachystatin B TMEM154 PF15102.6 ORF40922 - 0.42 10.5 3.3 0.78 9.6 0.1 2.5 1 1 0 2 2 2 0 TMEM154 protein family DNA_methylase PF00145.17 ORF40349 - 7e-14 51.9 0.0 1.4e-13 50.9 0.0 1.4 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase Esterase PF00756.20 ORF32215 - 2.9e-18 66.4 0.0 1.2e-17 64.4 0.0 1.8 1 1 0 1 1 1 1 Putative esterase CBM_48 PF02922.18 ORF32215 - 4.3e-08 33.4 0.1 9.9e-08 32.2 0.1 1.5 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Abhydrolase_2 PF02230.16 ORF32215 - 0.091 12.5 0.0 1.1 9.0 0.0 2.2 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase DUF1825 PF08855.10 ORF29008 - 0.076 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) OmpA PF00691.20 ORF24925 - 5.8e-05 23.4 0.1 0.00051 20.4 0.0 2.4 2 1 0 2 2 2 1 OmpA family PaREP1 PF05942.11 ORF24925 - 0.0031 17.4 0.2 0.011 15.7 0.2 1.9 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family Baculo_PEP_C PF04513.12 ORF24925 - 0.028 14.5 2.0 0.028 14.5 2.0 2.5 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Apo-CIII PF05778.12 ORF24925 - 0.032 13.8 2.4 0.27 10.9 2.3 2.6 1 1 0 1 1 1 0 Apolipoprotein CIII (Apo-CIII) RtcR PF06956.11 ORF24925 - 0.066 12.6 1.7 0.079 12.4 0.1 1.8 2 1 0 2 2 2 0 Regulator of RNA terminal phosphate cyclase REV1_C PF16727.5 ORF24925 - 0.22 11.9 5.7 0.37 11.2 0.1 3.1 3 1 0 3 3 3 0 DNA repair protein REV1 C-terminal domain LPP20 PF02169.16 ORF24925 - 0.34 11.3 4.8 3.1 8.2 5.2 2.4 2 0 0 2 2 2 0 LPP20 lipoprotein Nsp1_C PF05064.13 ORF24925 - 1.8 8.4 11.8 0.31 10.9 3.0 2.5 2 0 0 2 2 2 0 Nsp1-like C-terminal region STAT_int PF02865.17 ORF24925 - 2.5 8.6 10.6 0.11 13.0 2.6 2.3 2 0 0 2 2 2 0 STAT protein, protein interaction domain CcdA PF07362.12 ORF24925 - 2.6 8.6 8.4 0.14 12.7 1.5 2.6 3 0 0 3 3 3 0 Post-segregation antitoxin CcdA ApoLp-III PF07464.11 ORF24925 - 4 7.5 19.3 1 9.4 10.3 2.9 2 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) KELK PF15796.5 ORF24925 - 6.1 7.4 11.5 0.43 11.1 1.2 3.2 3 0 0 3 3 3 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase LMBR1 PF04791.16 ORF24925 - 9.2 5.0 8.5 8.5 5.2 0.1 2.0 1 1 0 2 2 2 0 LMBR1-like membrane protein AIRS_C PF02769.22 ORF21466 - 1.5e-23 83.6 1.5 6.8e-23 81.5 1.5 2.0 1 1 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF21466 - 2.3e-20 73.0 0.2 6.3e-20 71.6 0.2 1.8 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain GPI-anchored PF10342.9 ORF151717 - 1e-05 26.2 0.0 2.2e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family ThrE PF06738.12 ORF145721 - 0.0034 16.8 1.0 2.1 7.6 0.1 2.3 2 0 0 2 2 2 2 Putative threonine/serine exporter TMEM132D_C PF15706.5 ORF145721 - 0.031 14.1 1.7 9.4 6.1 0.1 2.9 3 0 0 3 3 3 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF3493 PF11998.8 ORF145721 - 0.095 12.9 1.5 7.9 6.7 0.1 2.9 3 0 0 3 3 3 0 Low psii accumulation1 / Rep27 PspC PF04024.12 ORF145721 - 7.3 6.5 10.7 9.6 6.1 0.0 3.7 3 0 0 3 3 3 0 PspC domain Esterase PF00756.20 ORF140181 - 2.9e-18 66.4 0.0 1.2e-17 64.4 0.0 1.8 1 1 0 1 1 1 1 Putative esterase CBM_48 PF02922.18 ORF140181 - 4.3e-08 33.4 0.1 9.9e-08 32.2 0.1 1.5 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Abhydrolase_2 PF02230.16 ORF140181 - 0.091 12.5 0.0 1.1 9.0 0.0 2.2 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase Nop14 PF04147.12 ORF139290 - 4.1e-12 45.2 11.2 6.2e-12 44.6 11.2 1.3 1 1 0 1 1 1 1 Nop14-like family LysR_substrate PF03466.20 ORF13387 - 1.6e-24 86.4 0.0 2.4e-24 85.9 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF13387 - 3.3e-15 55.8 0.0 6.1e-15 54.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_23 PF13384.6 ORF13387 - 0.046 13.5 0.0 0.089 12.6 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_30 PF13556.6 ORF13387 - 0.076 12.8 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain PLATZ PF04640.14 ORF13387 - 0.19 12.4 0.3 0.97 10.1 0.2 2.0 2 0 0 2 2 2 0 PLATZ transcription factor RRM_1 PF00076.22 ORF119746 - 8.1e-21 73.6 0.0 2.5e-09 36.8 0.0 3.2 3 0 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RBM39linker PF15519.6 ORF119746 - 7e-05 23.8 0.0 0.00019 22.5 0.0 1.7 1 0 0 1 1 1 1 linker between RRM2 and RRM3 domains in RBM39 protein RRM_3 PF08777.11 ORF119746 - 0.0031 17.5 0.0 0.014 15.4 0.0 2.0 2 0 0 2 2 2 1 RNA binding motif Nup35_RRM_2 PF14605.6 ORF119746 - 0.0081 16.1 0.1 3.9 7.6 0.0 3.2 3 0 0 3 3 3 1 Nup53/35/40-type RNA recognition motif DUF1866 PF08952.11 ORF119746 - 0.08 12.8 0.0 7.9 6.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1866) TMEM154 PF15102.6 ORF118346 - 0.43 10.5 3.3 0.78 9.6 0.1 2.4 1 1 0 2 2 2 0 TMEM154 protein family PolC_DP2 PF03833.13 ORF115956 - 0.18 9.7 0.0 0.23 9.3 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 PDEase_I PF00233.19 ORF110971 - 7.3e-66 222.3 8.9 1.2e-65 221.6 8.9 1.3 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase VPS9 PF02204.18 ORF110971 - 0.031 14.5 0.3 0.068 13.4 0.3 1.6 1 0 0 1 1 1 0 Vacuolar sorting protein 9 (VPS9) domain zf-C2HC_2 PF13913.6 ORF108823 - 6.3e-48 159.9 31.2 2.2e-10 40.2 0.8 6.5 7 0 0 7 7 7 6 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF108823 - 1.5e-07 31.7 29.1 0.018 15.8 1.0 7.0 6 1 0 6 6 6 3 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF108823 - 1.1e-06 28.7 22.1 0.0062 16.9 0.5 6.9 7 0 0 7 7 6 2 Zinc finger, C2H2 type zf-CpG_bind_C PF12269.8 ORF108823 - 0.00012 22.0 15.2 0.019 14.8 0.2 5.6 3 1 3 6 6 6 1 CpG binding protein zinc finger C terminal domain OrsD PF12013.8 ORF108823 - 0.002 18.6 0.4 23 5.5 0.0 4.9 5 0 0 5 5 5 0 Orsellinic acid/F9775 biosynthesis cluster protein D c-SKI_SMAD_bind PF08782.10 ORF108823 - 0.002 18.3 10.8 6.9 7.0 0.1 5.0 5 1 1 6 6 5 1 c-SKI Smad4 binding domain zf-FPG_IleRS PF06827.14 ORF108823 - 0.0031 17.3 11.4 0.79 9.6 0.6 3.9 3 0 0 3 3 3 2 Zinc finger found in FPG and IleRS DUF2318 PF10080.9 ORF108823 - 0.0046 17.0 14.2 8.3 6.6 0.1 5.7 5 1 1 6 6 6 1 Predicted membrane protein (DUF2318) zf-dskA_traR PF01258.17 ORF108823 - 0.0069 16.3 1.1 6.7 6.8 0.0 3.2 2 0 0 2 2 2 2 Prokaryotic dksA/traR C4-type zinc finger Rad50_zn_hook PF04423.14 ORF108823 - 0.014 15.2 6.6 0.2 11.5 0.0 4.9 5 0 0 5 5 5 0 Rad50 zinc hook motif Sgf11 PF08209.11 ORF108823 - 0.018 14.6 17.3 1.1 8.9 0.2 5.1 6 0 0 6 6 6 0 Sgf11 (transcriptional regulation protein) zf-RING_7 PF02591.15 ORF108823 - 0.022 14.9 1.6 8.5 6.7 0.0 3.8 3 0 0 3 3 3 0 C4-type zinc ribbon domain LIAS_N PF16881.5 ORF108823 - 0.034 14.5 0.6 3.1 8.3 0.0 3.0 3 0 0 3 3 3 0 N-terminal domain of lipoyl synthase of Radical_SAM family zf_UBZ PF18439.1 ORF108823 - 0.064 12.9 13.9 2.8 7.6 0.0 4.7 6 0 0 6 6 5 0 Ubiquitin-Binding Zinc Finger TRAF6_Z2 PF18048.1 ORF108823 - 0.077 13.1 2.1 0.58 10.3 0.1 3.3 3 1 1 4 4 3 0 TNF receptor-associated factor 6 zinc finger 2 zf-U11-48K PF05253.12 ORF108823 - 0.22 11.5 5.8 31 4.6 0.0 5.0 5 0 0 5 5 5 0 U11-48K-like CHHC zinc finger zf-CSL PF05207.13 ORF108823 - 0.47 10.2 7.7 17 5.2 0.2 3.8 3 1 0 3 3 3 0 CSL zinc finger DUF35_N PF12172.8 ORF108823 - 1.7 8.6 8.5 19 5.2 0.2 3.6 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF4428 PF14471.6 ORF108823 - 8.5 6.4 10.8 22 5.1 0.4 4.4 3 1 1 4 4 4 0 Domain of unknown function (DUF4428) Spc7 PF08317.11 ORF106510 - 0.024 13.5 19.3 0.019 13.9 16.8 1.9 2 0 0 2 2 2 0 Spc7 kinetochore protein Rpn3_C PF08375.11 ORF106510 - 0.089 13.2 2.5 7.2 7.1 1.2 3.1 2 1 0 2 2 2 0 Proteasome regulatory subunit C-terminal FAD_oxidored PF12831.7 ORF106510 - 0.15 11.4 2.2 0.24 10.7 2.2 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase DUF4897 PF16238.5 ORF106510 - 0.51 10.2 14.7 0.79 9.6 0.6 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4897) ApoO PF09769.9 ORF106510 - 0.62 10.0 1.7 9.2 6.2 0.1 2.5 2 0 0 2 2 2 0 Apolipoprotein O DUF4407 PF14362.6 ORF106510 - 1 8.6 10.6 1.7 7.9 10.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Golgin_A5 PF09787.9 ORF106510 - 5.5 6.4 23.8 0.8 9.1 9.2 2.3 1 1 1 2 2 2 0 Golgin subfamily A member 5 Noelin-1 PF12308.8 ORF106510 - 5.6 7.0 9.6 1.8 8.6 4.2 2.9 2 1 0 2 2 2 0 Neurogenesis glycoprotein TMPIT PF07851.13 ORF106510 - 8.9 5.5 14.2 1.8 7.7 10.0 1.8 1 1 0 1 1 1 0 TMPIT-like protein SbcCD_C PF13558.6 ORF106316 - 6e-16 58.5 0.0 1.3e-15 57.3 0.0 1.6 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 ORF106316 - 0.016 14.9 0.2 0.051 13.3 0.0 1.9 2 0 0 2 2 2 0 AAA domain Atg14 PF10186.9 ORF106316 - 0.25 10.4 4.4 0.34 9.9 4.4 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 ORF106316 - 0.54 9.8 5.1 0.77 9.3 5.1 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit PSD4 PF07631.11 ORF106316 - 0.84 10.2 6.8 3.6 8.2 0.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1592) zf-C4H2 PF10146.9 ORF106316 - 4.1 7.6 7.8 5.8 7.2 7.0 1.6 1 1 0 1 1 1 0 Zinc finger-containing protein zf-C2HC_2 PF13913.6 ORF105226 - 6.3e-48 159.9 31.2 2.2e-10 40.2 0.8 6.5 7 0 0 7 7 7 6 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF105226 - 1.5e-07 31.7 29.1 0.018 15.8 1.0 7.0 6 1 0 6 6 6 3 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF105226 - 1.1e-06 28.7 22.1 0.0062 16.9 0.5 6.9 7 0 0 7 7 6 2 Zinc finger, C2H2 type zf-CpG_bind_C PF12269.8 ORF105226 - 0.00012 22.0 15.2 0.019 14.8 0.2 5.6 3 1 3 6 6 6 1 CpG binding protein zinc finger C terminal domain OrsD PF12013.8 ORF105226 - 0.002 18.6 0.4 23 5.5 0.0 4.9 5 0 0 5 5 5 0 Orsellinic acid/F9775 biosynthesis cluster protein D c-SKI_SMAD_bind PF08782.10 ORF105226 - 0.002 18.3 10.8 6.9 7.0 0.1 5.0 5 1 1 6 6 5 1 c-SKI Smad4 binding domain zf-FPG_IleRS PF06827.14 ORF105226 - 0.0031 17.3 11.4 0.79 9.6 0.6 3.9 3 0 0 3 3 3 2 Zinc finger found in FPG and IleRS DUF2318 PF10080.9 ORF105226 - 0.0046 17.0 14.2 8.3 6.6 0.1 5.7 5 1 1 6 6 6 1 Predicted membrane protein (DUF2318) zf-dskA_traR PF01258.17 ORF105226 - 0.0069 16.3 1.1 6.7 6.8 0.0 3.2 2 0 0 2 2 2 2 Prokaryotic dksA/traR C4-type zinc finger Rad50_zn_hook PF04423.14 ORF105226 - 0.014 15.2 6.6 0.2 11.5 0.0 4.9 5 0 0 5 5 5 0 Rad50 zinc hook motif Sgf11 PF08209.11 ORF105226 - 0.018 14.6 17.3 1.1 8.9 0.2 5.1 6 0 0 6 6 6 0 Sgf11 (transcriptional regulation protein) zf-RING_7 PF02591.15 ORF105226 - 0.022 14.9 1.6 8.5 6.7 0.0 3.8 3 0 0 3 3 3 0 C4-type zinc ribbon domain LIAS_N PF16881.5 ORF105226 - 0.034 14.5 0.6 3.1 8.3 0.0 3.0 3 0 0 3 3 3 0 N-terminal domain of lipoyl synthase of Radical_SAM family zf_UBZ PF18439.1 ORF105226 - 0.064 12.9 13.9 2.8 7.6 0.0 4.7 6 0 0 6 6 5 0 Ubiquitin-Binding Zinc Finger TRAF6_Z2 PF18048.1 ORF105226 - 0.077 13.1 2.1 0.58 10.3 0.1 3.3 3 1 1 4 4 3 0 TNF receptor-associated factor 6 zinc finger 2 zf-U11-48K PF05253.12 ORF105226 - 0.22 11.5 5.8 31 4.6 0.0 5.0 5 0 0 5 5 5 0 U11-48K-like CHHC zinc finger zf-CSL PF05207.13 ORF105226 - 0.47 10.2 7.7 17 5.2 0.2 3.8 3 1 0 3 3 3 0 CSL zinc finger DUF35_N PF12172.8 ORF105226 - 1.7 8.6 8.5 19 5.2 0.2 3.6 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF4428 PF14471.6 ORF105226 - 8.5 6.4 10.8 22 5.1 0.4 4.4 3 1 1 4 4 4 0 Domain of unknown function (DUF4428) SH3_16 PF18348.1 ORF103739 - 0.0099 15.7 0.1 1.8 8.4 0.1 2.6 2 0 0 2 2 2 2 Bacterial dipeptidyl-peptidase Sh3 domain Spectrin PF00435.21 ORF103739 - 0.073 13.6 9.3 0.034 14.6 4.2 2.5 2 0 0 2 2 2 0 Spectrin repeat Mod_r PF07200.13 ORF103739 - 0.66 10.1 9.6 0.17 12.0 3.6 2.3 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein DUF1664 PF07889.12 ORF103739 - 4.9 7.2 5.3 8 6.5 0.8 2.7 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) T2SSF PF00482.23 ORF102557 - 4.5e-54 181.7 7.0 1.5e-29 102.5 0.1 2.4 2 0 0 2 2 2 2 Type II secretion system (T2SS), protein F UPF0093 PF03653.13 ORF102557 - 0.0083 16.4 1.2 0.15 12.3 0.1 2.5 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0093) DUF1825 PF08855.10 ORF102353 - 0.076 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) DUF1825 PF08855.10 ORF102268 - 0.076 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) HABP4_PAI-RBP1 PF04774.15 ORF101972 - 3.9e-06 27.7 14.6 3.9e-06 27.7 14.6 4.3 2 1 1 3 3 3 1 Hyaluronan / mRNA binding family zf-RING_2 PF13639.6 ORF99160 - 2e-06 28.0 6.6 4.3e-06 26.9 6.6 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF99160 - 6.5e-05 22.7 5.9 0.00012 21.8 5.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF99160 - 9e-05 22.7 6.5 0.00023 21.4 6.5 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF99160 - 0.00017 21.3 5.8 0.0003 20.6 5.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF99160 - 0.00076 19.4 6.8 0.0018 18.2 6.8 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF99160 - 0.00097 19.1 8.3 0.0012 18.9 1.2 2.6 2 0 0 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF99160 - 0.0012 18.6 6.2 0.0024 17.7 6.2 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF99160 - 0.0021 17.9 7.8 0.0021 17.9 7.8 2.0 1 1 1 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF99160 - 0.024 14.8 8.5 0.33 11.1 8.8 2.3 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Tudor-knot PF11717.8 ORF99160 - 0.063 13.2 0.6 0.16 11.9 0.6 1.7 1 0 0 1 1 1 0 RNA binding activity-knot of a chromodomain MBT PF02820.18 ORF99160 - 0.11 12.8 0.0 0.23 11.9 0.0 1.5 1 0 0 1 1 1 0 mbt repeat Gemini_AL2 PF01440.16 ORF99160 - 3.4 8.1 14.1 1.6 9.2 1.6 2.5 2 0 0 2 2 2 0 Geminivirus AL2 protein zf-RING_2 PF13639.6 ORF86658 - 8.2e-09 35.7 5.4 8.2e-09 35.7 5.4 2.2 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF86658 - 6e-07 29.2 6.0 1.4e-06 28.1 6.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF86658 - 6.5e-07 29.1 4.4 1.6e-06 27.9 4.4 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF86658 - 2.2e-06 27.5 4.9 5.8e-06 26.2 4.9 1.8 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF86658 - 3.2e-06 26.9 4.4 7.6e-06 25.7 4.4 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF86658 - 1.2e-05 25.0 4.6 3e-05 23.8 4.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF86658 - 3.3e-05 23.4 2.8 3.3e-05 23.4 2.8 1.8 2 0 0 2 2 1 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF86658 - 0.00011 21.8 3.7 0.0003 20.5 3.7 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF86658 - 0.00027 21.2 7.1 0.00027 21.2 7.1 2.2 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF86658 - 0.00039 20.4 4.2 0.0011 18.9 4.2 1.8 1 0 0 1 1 1 1 RING-type zinc-finger Rtf2 PF04641.12 ORF86658 - 0.00064 19.2 0.5 0.00084 18.8 0.5 1.1 1 0 0 1 1 1 1 Rtf2 RING-finger zf-ANAPC11 PF12861.7 ORF86658 - 0.0085 16.1 1.0 0.0085 16.1 1.0 1.8 2 0 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-UDP PF14569.6 ORF86658 - 0.056 13.6 1.8 0.15 12.2 1.8 1.7 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-RING_9 PF13901.6 ORF86658 - 0.094 12.7 3.0 0.15 12.0 3.0 1.3 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon Vps39_2 PF10367.9 ORF86658 - 0.097 13.1 0.2 0.097 13.1 0.2 2.2 3 0 0 3 3 3 0 Vacuolar sorting protein 39 domain 2 C1_1 PF00130.22 ORF86658 - 0.17 11.8 3.2 0.093 12.6 0.8 1.8 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) 7tm_1 PF00001.21 ORF86658 - 0.71 9.2 11.7 4.4 6.5 11.7 2.1 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) zf-RING-like PF08746.11 ORF86658 - 1.3 9.3 9.4 0.13 12.6 4.3 2.1 2 1 0 2 2 2 0 RING-like domain DUF4834 PF16118.5 ORF86658 - 2.4 9.2 0.0 2.4 9.2 0.0 3.2 4 0 0 4 4 3 0 Domain of unknown function (DUF4834) VWA_2 PF13519.6 ORF77764 - 3.1e-08 34.2 0.3 3.1e-06 27.8 0.2 2.8 1 1 1 2 2 2 1 von Willebrand factor type A domain zf-Sec23_Sec24 PF04810.15 ORF77764 - 5.3e-08 32.8 9.4 1e-06 28.7 9.4 2.4 1 1 0 1 1 1 1 Sec23/Sec24 zinc finger VWA PF00092.28 ORF77764 - 4.5e-05 23.8 2.3 0.041 14.1 0.4 3.2 2 1 0 2 2 2 1 von Willebrand factor type A domain Sec23_trunk PF04811.15 ORF77764 - 0.0015 18.1 0.1 0.01 15.4 0.1 2.2 1 1 0 1 1 1 1 Sec23/Sec24 trunk domain DUF4807 PF16065.5 ORF77764 - 0.068 12.8 0.0 0.29 10.8 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4807) DUF1660 PF07874.11 ORF77764 - 0.083 13.4 1.0 0.31 11.6 0.1 2.5 1 1 1 2 2 2 0 Prophage protein (DUF1660) zinc_ribbon_10 PF10058.9 ORF77764 - 0.32 10.8 2.4 12 5.7 0.2 2.6 3 0 0 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein CCT PF06203.14 ORF7240 - 1.8e-07 31.1 9.7 1.8e-07 31.1 9.7 1.8 2 0 0 2 2 2 1 CCT motif rve_2 PF13333.6 ORF7240 - 0.015 15.5 0.1 0.035 14.3 0.1 1.6 1 0 0 1 1 1 0 Integrase core domain Pkinase PF00069.25 ORF7212 - 4.3e-63 213.2 0.0 7.6e-63 212.3 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF7212 - 3.7e-29 101.8 0.1 7.5e-29 100.8 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF7212 - 7.8e-29 99.9 3.4 5.6e-14 52.3 0.8 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF7212 - 8.6e-29 96.9 7.3 4.4e-07 29.0 0.2 4.9 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF7212 - 2.1e-23 80.2 6.0 2.8e-07 29.9 0.3 4.8 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF7212 - 7.1e-21 72.7 8.6 1.1e-05 24.7 0.1 4.7 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF7212 - 3e-15 55.8 10.8 2.3e-06 27.4 0.6 4.6 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF7212 - 5.7e-08 33.1 0.9 0.002 18.4 0.2 2.5 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kinase-like PF14531.6 ORF7212 - 3.7e-07 29.8 0.0 9.8e-07 28.4 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF7212 - 2.6e-06 27.0 0.2 7.2e-06 25.5 0.0 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF7212 - 5.1e-06 26.4 3.3 0.066 13.2 0.1 2.7 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand APH PF01636.23 ORF7212 - 3.8e-05 23.7 0.0 8e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_9 PF14658.6 ORF7212 - 0.0015 18.8 0.0 0.022 15.1 0.0 2.8 2 0 0 2 2 2 1 EF-hand domain DUF5580 PF17743.1 ORF7212 - 0.0016 17.1 0.4 0.0098 14.5 0.0 1.9 1 1 1 2 2 2 1 Family of unknown function (DUF5580) YrbL-PhoP_reg PF10707.9 ORF7212 - 0.014 14.9 0.0 0.35 10.3 0.0 2.3 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF7212 - 0.026 13.3 0.0 0.044 12.6 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase DUF4032 PF13224.6 ORF7212 - 0.091 12.6 0.2 0.28 11.1 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4032) Dockerin_1 PF00404.18 ORF7212 - 0.53 10.5 2.9 3.5 7.9 0.3 3.6 4 1 0 4 4 4 0 Dockerin type I domain FGGY_N PF00370.21 ORF66106 - 3.3e-10 40.0 0.0 1.1e-05 25.1 0.0 2.4 2 1 0 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 ORF66106 - 0.00056 19.7 0.0 0.00094 18.9 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Beta-lactamase PF00144.24 ORF61898 - 3.3e-15 56.2 0.0 5.6e-15 55.4 0.0 1.3 1 1 0 1 1 1 1 Beta-lactamase FAST_1 PF06743.15 ORF57414 - 5.1e-10 39.1 2.3 0.17 11.9 0.0 5.8 1 1 6 7 7 7 5 FAST kinase-like protein, subdomain 1 DUF1601 PF07671.11 ORF57414 - 0.42 10.5 9.2 13 5.8 0.1 5.2 6 0 0 6 6 6 0 Protein of unknown function (DUF1601) TspO_MBR PF03073.15 ORF57414 - 6.6 6.8 8.3 5.1 7.2 0.5 3.1 1 1 1 2 2 2 0 TspO/MBR family Abhydro_lipase PF04083.16 ORF56537 - 6.2e-19 67.3 0.0 1.1e-18 66.5 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF56537 - 0.00061 19.5 0.2 0.0011 18.7 0.2 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold HD_5 PF13487.6 ORF56537 - 0.16 12.3 0.0 0.31 11.3 0.0 1.4 1 0 0 1 1 1 0 HD domain YchF-GTPase_C PF06071.13 ORF55683 - 3.5e-39 132.9 0.0 8.4e-39 131.6 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 ORF55683 - 3.6e-20 72.2 0.0 1.5e-19 70.2 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF55683 - 7.5e-06 25.6 0.0 1.9e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 Ferrous iron transport protein B AAA_18 PF13238.6 ORF55683 - 0.019 15.5 0.2 4.4 7.9 0.0 2.5 2 0 0 2 2 2 0 AAA domain TGS PF02824.21 ORF55683 - 0.093 12.8 0.0 0.28 11.3 0.0 1.8 1 1 0 1 1 1 0 TGS domain Dynamin_N PF00350.23 ORF55683 - 0.13 12.3 0.2 3.9 7.5 0.0 2.8 2 1 1 3 3 3 0 Dynamin family Ketoacyl-synt_C PF02801.22 ORF52880 - 6.2e-27 94.0 0.1 9.9e-27 93.3 0.1 1.3 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ketoacyl-synt PF00109.26 ORF52880 - 0.0029 17.2 0.0 0.0059 16.2 0.0 1.5 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Utp12 PF04003.12 ORF46699 - 6.2e-12 45.8 0.0 1e-11 45.1 0.0 1.4 1 0 0 1 1 1 1 Dip2/Utp12 Family EF1G PF00647.19 ORF4370 - 2.3e-29 101.6 0.1 4.8e-29 100.5 0.1 1.6 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_N PF02798.20 ORF4370 - 1.6e-09 38.0 0.0 3.7e-09 36.8 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF4370 - 1.3e-06 28.7 0.0 3e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF4370 - 1.5e-06 28.3 0.4 8.6e-06 25.9 0.0 2.3 2 1 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF4370 - 0.00015 21.7 0.0 0.00035 20.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF4370 - 0.0002 21.5 1.1 0.00044 20.4 0.0 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF4370 - 0.0044 16.8 0.0 0.0081 15.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF4370 - 0.0088 16.3 0.0 0.019 15.2 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF4370 - 0.074 13.8 0.0 0.19 12.5 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain GluRS_N PF18466.1 ORF4370 - 0.14 12.6 0.3 2.5 8.6 0.0 2.9 3 0 0 3 3 3 0 Glutamate--tRNA ligase N-terminal domain Pkinase_Tyr PF07714.17 ORF42559 - 0.037 13.3 0.0 0.065 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase DUF445 PF04286.12 ORF3759 - 0.035 13.9 11.0 0.058 13.2 11.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF445) DUF16 PF01519.16 ORF3759 - 0.15 12.6 11.3 0.084 13.4 0.9 3.5 3 2 0 3 3 3 0 Protein of unknown function DUF16 DUF3150 PF11348.8 ORF3759 - 0.23 10.6 5.8 0.063 12.5 2.5 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3150) SbsC_C PF18058.1 ORF3759 - 1.1 9.5 10.3 0.17 12.1 1.3 3.2 2 1 1 3 3 3 0 SbsC C-terminal domain GIT1_C PF12205.8 ORF3759 - 3.8 7.7 6.6 24 5.1 0.4 2.9 2 1 1 3 3 3 0 G protein-coupled receptor kinase-interacting protein 1 C term ABC_tran PF00005.27 ORF34042 - 4.1e-31 108.3 0.2 7.6e-31 107.5 0.2 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF34042 - 1.4e-05 24.6 4.3 3.3e-05 23.4 0.5 2.1 1 1 1 2 2 2 1 RecF/RecN/SMC N terminal domain ABC_membrane PF00664.23 ORF34042 - 3.6e-05 23.5 0.5 5e-05 23.1 0.5 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_24 PF13479.6 ORF34042 - 0.0049 16.6 0.1 0.008 15.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 ORF34042 - 0.029 14.5 0.2 0.08 13.0 0.0 1.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase DDRGK PF09756.9 ORF34042 - 0.052 13.1 0.5 0.084 12.5 0.5 1.3 1 0 0 1 1 1 0 DDRGK domain DUF87 PF01935.17 ORF34042 - 0.064 13.3 1.1 0.13 12.4 0.9 1.6 1 1 0 1 1 1 0 Helicase HerA, central domain AAA_29 PF13555.6 ORF34042 - 0.083 12.6 0.2 0.2 11.4 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain NB-ARC PF00931.22 ORF34042 - 0.099 11.8 1.0 2.6 7.1 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain ATP-synt_ab PF00006.25 ORF34042 - 0.11 12.2 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain FKBP_N_2 PF18023.1 ORF34042 - 0.12 12.5 2.0 0.13 12.4 0.9 1.7 2 0 0 2 2 2 0 BDBT FKBP like N-terminal CbiA PF01656.23 ORF34042 - 0.12 12.4 0.3 0.24 11.4 0.1 1.7 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain polyprenyl_synt PF00348.17 ORF29917 - 6.8e-49 166.2 0.1 8.5e-49 165.9 0.1 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks36.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks36.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks36.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks36.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CSN4_RPN5_eIF3a PF18420.1 NODE_71435_length_221_cov_1.338710_g63494_i0forward_frame_2 - 0.0038 17.3 0.9 0.01 16.0 0.9 1.7 1 1 0 1 1 1 1 CSN4/RPN5/eIF3a helix turn helix domain Molybdop_Fe4S4 PF04879.16 NODE_71432_length_221_cov_1.360215_g63491_i0reverse_frame_2 - 0.048 13.7 0.5 0.06 13.3 0.5 1.4 1 1 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain Phtf-FEM1B_bdg PF12129.8 NODE_71432_length_221_cov_1.360215_g63491_i0forward_frame_2 - 3.4 7.5 7.0 1.5 8.6 4.9 1.4 1 1 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor DUF3179 PF11376.8 NODE_71431_length_221_cov_1.370968_g63490_i0reverse_frame_3 - 0.16 11.3 0.4 0.18 11.2 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3179) ORC4_C PF14629.6 NODE_71431_length_221_cov_1.370968_g63490_i0reverse_frame_2 - 0.041 13.2 0.4 0.044 13.2 0.4 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 4 C-terminus Spo7 PF03907.13 NODE_71431_length_221_cov_1.370968_g63490_i0forward_frame_2 - 0.11 12.0 0.3 0.11 11.9 0.3 1.0 1 0 0 1 1 1 0 Spo7-like protein Peptidase_M7 PF02031.16 NODE_71425_length_221_cov_1.408602_g63484_i0reverse_frame_2 - 0.13 12.3 0.8 0.15 12.1 0.8 1.2 1 0 0 1 1 1 0 Streptomyces extracellular neutral proteinase (M7) family HDOD PF08668.12 NODE_71423_length_221_cov_1.419355_g63482_i0forward_frame_3 - 0.098 12.1 0.0 0.098 12.1 0.0 1.1 1 0 0 1 1 1 0 HDOD domain MerC PF03203.14 NODE_71420_length_221_cov_1.446237_g63479_i0reverse_frame_3 - 0.013 15.9 2.8 0.015 15.7 2.8 1.0 1 0 0 1 1 1 0 MerC mercury resistance protein Pns11_12 PF17464.2 NODE_71420_length_221_cov_1.446237_g63479_i0forward_frame_2 - 0.022 14.5 0.4 0.028 14.1 0.4 1.0 1 0 0 1 1 1 0 Non-structural protein 11 and 12 Lgl_C PF08596.10 NODE_71416_length_221_cov_1.467742_g63475_i0forward_frame_3 - 0.06 12.1 0.0 0.063 12.0 0.0 1.0 1 0 0 1 1 1 0 Lethal giant larvae(Lgl) like, C-terminal Thioredoxin_16 PF18569.1 NODE_71416_length_221_cov_1.467742_g63475_i0forward_frame_3 - 0.13 12.4 0.3 0.15 12.2 0.3 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain FAR1 PF03101.15 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_3 - 3.3 8.5 8.9 4.1 8.2 8.9 1.1 1 0 0 1 1 1 0 FAR1 DNA-binding domain T3SS_needle_E PF08988.10 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_2 - 3.2 8.0 6.8 4.5 7.5 6.8 1.2 1 0 0 1 1 1 0 Type III secretion system, cytoplasmic E component of needle DUF3464 PF11947.8 NODE_71415_length_221_cov_1.467742_g63474_i0reverse_frame_2 - 4.3 7.1 7.0 4.6 7.0 7.0 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 NUC202 PF08166.12 NODE_71414_length_221_cov_1.494624_g63473_i0reverse_frame_2 - 0.17 12.0 2.2 0.23 11.6 2.1 1.3 1 1 0 1 1 1 0 NUC202 domain ACTL7A_N PF16840.5 NODE_71410_length_221_cov_1.516129_g63469_i0forward_frame_2 - 0.095 12.8 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Actin-like protein 7A N-terminus IBB PF01749.20 NODE_71401_length_221_cov_1.602151_g63460_i0reverse_frame_2 - 0.028 14.8 1.3 0.029 14.8 1.3 1.2 1 0 0 1 1 1 0 Importin beta binding domain Toxin_28 PF08115.11 NODE_71398_length_221_cov_1.629032_g63457_i0forward_frame_3 - 0.098 12.5 1.2 0.17 11.8 1.2 1.3 1 0 0 1 1 1 0 SFI toxin family DUF4215 PF13948.6 NODE_71395_length_221_cov_1.661290_g63454_i0reverse_frame_2 - 2.4e-07 31.1 15.5 6.4e-07 29.7 7.1 2.4 2 1 0 2 2 2 2 Domain of unknown function (DUF4215) S1FA PF04689.13 NODE_71394_length_221_cov_1.677419_g63453_i0reverse_frame_2 - 0.0075 16.4 0.3 0.012 15.8 0.3 1.4 1 1 0 1 1 1 1 DNA binding protein S1FA Acetyltransf_1 PF00583.25 NODE_71393_length_221_cov_1.688172_g63452_i0forward_frame_2 - 0.1 12.8 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family DUF4684 PF15736.5 NODE_71388_length_221_cov_1.715054_g63447_i0reverse_frame_3 - 0.024 13.3 0.6 0.026 13.2 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4684) OAF PF14941.6 NODE_71384_length_221_cov_1.720430_g63443_i0reverse_frame_3 - 0.094 12.1 1.7 0.11 11.9 1.7 1.0 1 0 0 1 1 1 0 Transcriptional regulator, Out at first Mu-conotoxin PF05374.12 NODE_71383_length_221_cov_1.720430_g63442_i0reverse_frame_3 - 2.3 8.3 10.2 3.6 7.7 10.2 1.2 1 0 0 1 1 1 0 Mu-Conotoxin F-box PF00646.33 NODE_71382_length_221_cov_1.720430_g63441_i0reverse_frame_2 - 0.018 14.9 1.2 0.018 14.9 1.2 1.7 2 0 0 2 2 2 0 F-box domain Terminase_4 PF05119.12 NODE_71382_length_221_cov_1.720430_g63441_i0forward_frame_3 - 0.25 11.8 1.4 9.7 6.7 0.2 2.0 1 1 1 2 2 2 0 Phage terminase, small subunit Lamprin PF06403.11 NODE_71381_length_221_cov_1.720430_g63440_i0forward_frame_2 - 0.028 14.4 2.8 0.03 14.3 2.8 1.2 1 0 0 1 1 1 0 Lamprin PIF PF05092.12 NODE_71380_length_221_cov_1.720430_g63439_i0forward_frame_2 - 0.06 12.1 0.0 0.06 12.1 0.0 1.0 1 0 0 1 1 1 0 Per os infectivity BAR_2 PF10455.9 NODE_71375_length_221_cov_1.790323_g63434_i0reverse_frame_3 - 0.055 12.6 0.0 0.055 12.6 0.0 1.1 1 0 0 1 1 1 0 Bin/amphiphysin/Rvs domain for vesicular trafficking TP2 PF01254.18 NODE_71374_length_221_cov_1.801075_g63433_i0reverse_frame_2 - 0.23 12.0 8.7 0.27 11.8 8.7 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 Afaf PF15339.6 NODE_71370_length_221_cov_1.827957_g63429_i0forward_frame_3 - 0.93 9.2 4.0 1 9.0 4.0 1.1 1 0 0 1 1 1 0 Acrosome formation-associated factor Somatostatin PF03002.15 NODE_71369_length_221_cov_1.844086_g63428_i0reverse_frame_3 - 0.063 13.2 2.3 0.12 12.3 2.3 1.4 1 0 0 1 1 1 0 Somatostatin/Cortistatin family 7tm_1 PF00001.21 NODE_71369_length_221_cov_1.844086_g63428_i0reverse_frame_2 - 0.038 13.3 0.4 0.04 13.2 0.4 1.1 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) MORN PF02493.20 NODE_71367_length_221_cov_1.854839_g63426_i0reverse_frame_3 - 2.7e-06 27.0 2.7 0.012 15.5 0.2 3.3 3 1 0 3 3 3 2 MORN repeat Acyl_transf_3 PF01757.22 NODE_71363_length_221_cov_1.892473_g63422_i0reverse_frame_2 - 2.3e-06 26.9 9.8 2.4e-06 26.9 9.8 1.0 1 0 0 1 1 1 1 Acyltransferase family UPF0016 PF01169.19 NODE_71363_length_221_cov_1.892473_g63422_i0reverse_frame_2 - 0.04 14.2 2.9 3.5 8.0 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized protein family UPF0016 zf-U11-48K PF05253.12 NODE_71360_length_221_cov_1.924731_g63419_i0reverse_frame_3 - 0.026 14.4 0.8 0.038 13.9 0.8 1.3 1 0 0 1 1 1 0 U11-48K-like CHHC zinc finger Med15_fungi PF05397.12 NODE_71359_length_221_cov_1.930108_g63418_i0forward_frame_2 - 0.0067 16.7 0.1 0.0069 16.6 0.1 1.0 1 0 0 1 1 1 1 Mediator complex subunit 15 Ribosomal_L36 PF00444.18 NODE_71358_length_221_cov_1.940860_g63417_i0forward_frame_2 - 0.011 15.9 2.9 0.02 15.1 2.9 1.4 1 0 0 1 1 1 0 Ribosomal protein L36 Crp PF00325.20 NODE_71353_length_221_cov_2.026882_g63412_i0reverse_frame_2 - 0.028 14.0 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family TPR_2 PF07719.17 NODE_71353_length_221_cov_2.026882_g63412_i0forward_frame_3 - 0.0077 16.3 0.0 0.013 15.5 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TMEM210 PF15195.6 NODE_71352_length_221_cov_2.059140_g63411_i0reverse_frame_3 - 0.091 13.2 0.9 0.12 12.8 0.9 1.1 1 0 0 1 1 1 0 TMEM210 family FYVE PF01363.21 NODE_71352_length_221_cov_2.059140_g63411_i0forward_frame_3 - 0.035 14.2 3.4 0.035 14.2 3.4 1.8 1 1 1 2 2 2 0 FYVE zinc finger Zn-ribbon_8 PF09723.10 NODE_71352_length_221_cov_2.059140_g63411_i0forward_frame_3 - 0.46 10.6 4.6 0.29 11.3 1.8 2.0 2 0 0 2 2 2 0 Zinc ribbon domain CI-B14_5a PF07347.12 NODE_71351_length_221_cov_2.096774_g63410_i0forward_frame_2 - 0.018 14.9 0.1 0.021 14.7 0.1 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) Baculo_VP91_N PF08475.10 NODE_71349_length_221_cov_2.112903_g63408_i0reverse_frame_3 - 0.18 11.4 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Viral capsid protein 91 N-terminal LrgA PF03788.14 NODE_71345_length_221_cov_2.139785_g63404_i0forward_frame_3 - 1.1e-13 50.9 3.4 1.6e-13 50.4 3.4 1.2 1 0 0 1 1 1 1 LrgA family Glycoprotein_G PF00802.19 NODE_71345_length_221_cov_2.139785_g63404_i0forward_frame_3 - 0.061 12.7 1.1 0.068 12.5 1.1 1.0 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Herpes_UL37_2 PF07413.11 NODE_71345_length_221_cov_2.139785_g63404_i0forward_frame_3 - 0.11 11.7 1.2 0.13 11.5 1.2 1.0 1 0 0 1 1 1 0 Betaherpesvirus immediate-early glycoprotein UL37 TGBp3 PF02495.17 NODE_71345_length_221_cov_2.139785_g63404_i0forward_frame_3 - 1.1 9.0 5.6 5.8 6.7 5.6 2.0 1 1 0 1 1 1 0 Triple gene block 3 Pro_sub2 PF18513.1 NODE_71342_length_221_cov_2.145161_g63401_i0reverse_frame_2 - 0.31 11.2 1.9 0.45 10.7 1.9 1.2 1 0 0 1 1 1 0 Prodomain subtilisin 2 DUF3139 PF11337.8 NODE_71335_length_221_cov_2.231183_g63394_i0forward_frame_2 - 0.086 13.5 0.2 0.11 13.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) Monooxygenase_B PF04744.12 NODE_71333_length_221_cov_2.268817_g63392_i0forward_frame_3 - 0.15 10.9 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Monooxygenase subunit B protein Nudix_N PF12535.8 NODE_71330_length_221_cov_2.327957_g63389_i0reverse_frame_2 - 0.029 14.0 0.5 0.041 13.5 0.5 1.2 1 0 0 1 1 1 0 Hydrolase of X-linked nucleoside diphosphate N terminal CSS-motif PF12792.7 NODE_71327_length_221_cov_2.360215_g63386_i0reverse_frame_3 - 9.2e-05 22.0 0.2 0.0001 21.9 0.2 1.1 1 0 0 1 1 1 1 CSS motif domain associated with EAL P22_AR_C PF10548.9 NODE_71327_length_221_cov_2.360215_g63386_i0forward_frame_2 - 0.076 13.2 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 P22AR C-terminal domain FeS PF04060.13 NODE_71324_length_221_cov_2.397849_g63383_i0reverse_frame_3 - 0.073 12.7 2.0 0.073 12.7 2.0 2.0 2 1 1 3 3 3 0 Putative Fe-S cluster ArgoN PF16486.5 NODE_71320_length_221_cov_2.451613_g63379_i0reverse_frame_2 - 0.048 14.3 0.0 0.057 14.0 0.0 1.1 1 0 0 1 1 1 0 N-terminal domain of argonaute GST_N PF02798.20 NODE_71319_length_221_cov_2.451613_g63378_i0reverse_frame_2 - 0.00011 22.5 0.0 0.00013 22.3 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Pkinase PF00069.25 NODE_71318_length_221_cov_2.456989_g63377_i0forward_frame_3 - 2.6e-14 53.2 0.0 2.8e-14 53.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_71318_length_221_cov_2.456989_g63377_i0forward_frame_3 - 0.0047 16.3 0.0 0.0048 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4478 PF14793.6 NODE_71315_length_221_cov_2.510753_g63374_i0reverse_frame_2 - 0.11 12.4 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases 3HCDH_N PF02737.18 NODE_71314_length_221_cov_2.532258_g63373_i0forward_frame_2 - 0.12 12.2 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ycf4 PF02392.16 NODE_71314_length_221_cov_2.532258_g63373_i0forward_frame_2 - 0.13 11.8 1.2 0.14 11.7 1.2 1.0 1 0 0 1 1 1 0 Ycf4 Glycos_transf_2 PF00535.26 NODE_71312_length_221_cov_2.661290_g63371_i0forward_frame_2 - 0.007 16.2 0.3 0.017 15.0 0.1 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 2 DegT_DnrJ_EryC1 PF01041.17 NODE_71312_length_221_cov_2.661290_g63371_i0forward_frame_2 - 0.023 14.0 0.0 0.03 13.6 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family G-7-MTase PF12803.7 NODE_71309_length_221_cov_2.806452_g63368_i0reverse_frame_3 - 0.051 12.7 1.0 0.062 12.5 1.0 1.1 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) Cas6b_C PF17262.2 NODE_71309_length_221_cov_2.806452_g63368_i0forward_frame_3 - 0.044 13.9 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 Cas6b C-terminal domain CTD_bind PF04818.13 NODE_71302_length_221_cov_3.091398_g63361_i0reverse_frame_3 - 0.072 13.9 1.7 0.11 13.4 0.4 1.8 2 0 0 2 2 2 0 RNA polymerase II-binding domain. VIT1 PF01988.19 NODE_71302_length_221_cov_3.091398_g63361_i0reverse_frame_3 - 0.41 10.5 0.8 0.4 10.5 0.8 1.0 1 0 0 1 1 1 0 VIT family CLIP_1 PF18322.1 NODE_71302_length_221_cov_3.091398_g63361_i0reverse_frame_2 - 0.003 17.6 0.9 0.0038 17.2 0.9 1.1 1 0 0 1 1 1 1 Serine protease Clip domain PPAF-2 TauE PF01925.19 NODE_71296_length_221_cov_3.387097_g63355_i0reverse_frame_2 - 0.0074 15.9 0.0 0.0077 15.9 0.0 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE RE_NgoPII PF09521.10 NODE_71296_length_221_cov_3.387097_g63355_i0forward_frame_3 - 0.065 12.4 0.0 0.068 12.3 0.0 1.1 1 0 0 1 1 1 0 NgoPII restriction endonuclease PH_3 PF14593.6 NODE_71296_length_221_cov_3.387097_g63355_i0forward_frame_3 - 0.11 12.6 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 PH domain DUF5136 PF17199.4 NODE_71293_length_221_cov_3.865591_g63352_i0forward_frame_2 - 5.4 6.8 9.1 9 6.1 3.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF5136) Cys_rich_KTR PF14205.6 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_3 - 0.019 14.7 0.7 0.033 14.0 0.7 1.5 1 1 0 1 1 1 0 Cysteine-rich KTR Pro_sub2 PF18513.1 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_2 - 0.0082 16.3 0.2 0.0094 16.1 0.2 1.2 1 0 0 1 1 1 1 Prodomain subtilisin 2 YvbH_ext PF11724.8 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_2 - 0.013 15.8 0.2 0.02 15.2 0.2 1.4 1 1 0 1 1 1 0 YvbH-like oligomerisation region Dynactin_p22 PF07426.11 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_2 - 0.047 13.5 0.5 0.055 13.3 0.5 1.1 1 0 0 1 1 1 0 Dynactin subunit p22 Goodbye PF17109.5 NODE_71292_length_221_cov_4.247312_g63351_i0reverse_frame_2 - 0.065 13.7 0.1 0.069 13.6 0.1 1.1 1 0 0 1 1 1 0 fungal STAND N-terminal Goodbye domain ATP-synt_8 PF00895.20 NODE_71292_length_221_cov_4.247312_g63351_i0forward_frame_3 - 0.18 12.3 1.5 0.26 11.8 1.5 1.2 1 0 0 1 1 1 0 ATP synthase protein 8 ILVD_EDD PF00920.21 NODE_71287_length_221_cov_4.795699_g63346_i0reverse_frame_2 - 5.4e-25 88.0 0.0 5.4e-25 88.0 0.0 1.0 1 0 0 1 1 1 1 Dehydratase family DUF1854 PF08909.11 NODE_71283_length_221_cov_12.752688_g63342_i0forward_frame_3 - 0.15 11.9 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1854) SCAI PF12070.8 NODE_71281_length_221_cov_14.623656_g63340_i0forward_frame_2 - 0.022 13.7 1.9 0.023 13.6 1.9 1.0 1 0 0 1 1 1 0 Protein SCAI TRP PF06011.12 NODE_71280_length_221_cov_16.161290_g63339_i0reverse_frame_3 - 0.19 10.4 3.9 0.21 10.3 3.9 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel ID PF18543.1 NODE_71278_length_221_cov_20.392473_g63337_i0reverse_frame_3 - 0.068 13.2 3.3 4.7 7.3 0.1 2.2 1 1 1 2 2 2 0 Intracellular delivery domain VWA_N2 PF16164.5 NODE_71278_length_221_cov_20.392473_g63337_i0reverse_frame_2 - 0.14 12.3 0.7 0.14 12.3 0.7 1.5 1 1 0 1 1 1 0 VWA N-terminal DUF454 PF04304.13 NODE_71276_length_221_cov_25.575269_g63335_i0reverse_frame_3 - 0.1 12.6 2.8 0.27 11.2 2.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF454) DUF3446 PF11928.8 NODE_71273_length_221_cov_30.564516_g63332_i0reverse_frame_3 - 0.05 13.9 0.1 0.061 13.6 0.1 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain Tox-REase-2 PF15646.6 NODE_71270_length_221_cov_31.790323_g63329_i0reverse_frame_2 - 0.036 14.2 0.1 0.041 14.0 0.1 1.0 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 ANATO PF01821.18 NODE_71267_length_221_cov_33.032258_g63326_i0forward_frame_3 - 0.077 13.9 1.8 0.077 13.9 1.8 2.1 2 0 0 2 2 2 0 Anaphylotoxin-like domain HemY_N PF07219.13 NODE_71265_length_221_cov_35.000000_g63324_i0reverse_frame_2 - 0.08 13.1 0.0 0.091 13.0 0.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus SPT16 PF08644.11 NODE_71264_length_221_cov_36.456989_g63323_i0reverse_frame_2 - 0.0023 18.1 5.7 0.0025 18.0 5.7 1.1 1 0 0 1 1 1 1 FACT complex subunit (SPT16/CDC68) LysR_substrate PF03466.20 NODE_71264_length_221_cov_36.456989_g63323_i0forward_frame_3 - 0.15 11.4 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 LysR substrate binding domain DUF2838 PF10998.8 NODE_71263_length_221_cov_36.596774_g63322_i0reverse_frame_3 - 0.14 12.4 8.1 0.17 12.2 8.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) DCX PF03607.17 NODE_71261_length_221_cov_38.354839_g63320_i0reverse_frame_2 - 0.044 13.9 0.1 0.061 13.4 0.1 1.2 1 0 0 1 1 1 0 Doublecortin Alpha-amylase PF00128.24 NODE_71260_length_221_cov_41.107527_g63319_i0forward_frame_3 - 5.7e-06 26.1 0.0 5.8e-06 26.1 0.0 1.0 1 0 0 1 1 1 1 Alpha amylase, catalytic domain HXXEE PF13787.6 NODE_71257_length_221_cov_42.446237_g63316_i0reverse_frame_2 - 0.07 13.9 4.4 0.11 13.3 4.4 1.4 1 1 0 1 1 1 0 Protein of unknown function with HXXEE motif CRA PF06589.11 NODE_71257_length_221_cov_42.446237_g63316_i0forward_frame_2 - 0.097 12.8 7.2 0.099 12.8 7.2 1.1 1 0 0 1 1 1 0 Circumsporozoite-related antigen (CRA) DSPc PF00782.20 NODE_71250_length_221_cov_49.403226_g63309_i0forward_frame_2 - 0.01 15.6 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain HPP PF04982.13 NODE_71243_length_221_cov_55.537634_g63302_i0reverse_frame_3 - 0.038 14.2 0.2 0.043 14.0 0.2 1.1 1 0 0 1 1 1 0 HPP family C_tripleX PF02363.19 NODE_71243_length_221_cov_55.537634_g63302_i0reverse_frame_2 - 1.3 9.5 5.2 8 7.0 0.3 2.2 2 0 0 2 2 2 0 Cysteine rich repeat CxC6 PF18721.1 NODE_71243_length_221_cov_55.537634_g63302_i0forward_frame_2 - 0.082 13.2 0.1 0.095 13.0 0.1 1.2 1 0 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases Headcase PF16002.5 NODE_71242_length_221_cov_56.005376_g63301_i0reverse_frame_3 - 0.0015 18.1 0.5 0.0017 17.8 0.5 1.1 1 0 0 1 1 1 1 Headcase protein zf-C2H2_3 PF13878.6 NODE_71242_length_221_cov_56.005376_g63301_i0forward_frame_3 - 0.23 11.3 0.9 0.29 11.0 0.5 1.4 1 1 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO DUF1279 PF06916.13 NODE_71241_length_221_cov_57.693548_g63300_i0reverse_frame_2 - 0.017 15.7 0.1 0.019 15.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1279) Flu_B_NS1 PF02942.14 NODE_71238_length_221_cov_58.731183_g63297_i0reverse_frame_2 - 0.028 13.5 0.4 0.031 13.3 0.4 1.0 1 0 0 1 1 1 0 Influenza B non-structural protein (NS1) EIIC-GAT PF03611.14 NODE_71238_length_221_cov_58.731183_g63297_i0forward_frame_3 - 0.73 8.9 3.7 0.74 8.9 3.7 1.0 1 0 0 1 1 1 0 PTS system sugar-specific permease component MHC_I_C PF06623.11 NODE_71237_length_221_cov_59.252688_g63296_i0reverse_frame_3 - 0.051 13.5 0.8 0.079 12.9 0.8 1.3 1 0 0 1 1 1 0 MHC_I C-terminus BCMA-Tall_bind PF09257.10 NODE_71237_length_221_cov_59.252688_g63296_i0reverse_frame_3 - 0.094 12.8 6.4 0.17 12.0 6.4 1.4 1 0 0 1 1 1 0 BCMA, TALL-1 binding DUF4718 PF15842.5 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 0.052 13.4 4.8 0.055 13.3 4.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) DUF1168 PF06658.12 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 0.094 12.5 15.0 0.11 12.3 15.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) GATase PF00117.28 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 0.15 11.8 0.4 0.17 11.7 0.4 1.0 1 0 0 1 1 1 0 Glutamine amidotransferase class-I PHC2_SAM_assoc PF16616.5 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 0.17 12.7 11.8 0.19 12.6 11.8 1.1 1 0 0 1 1 1 0 Unstructured region on Polyhomeotic-like protein 1 and 2 DUF755 PF05501.11 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 0.31 11.3 16.1 0.39 11.0 16.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) CMS1 PF14617.6 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 1.5 8.1 9.3 1.6 8.0 9.3 1.2 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit Peptidase_S49_N PF08496.10 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 2.5 8.1 10.3 2.9 7.9 10.3 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal NARP1 PF12569.8 NODE_71236_length_221_cov_59.725806_g63295_i0reverse_frame_2 - 3.7 6.4 13.0 4 6.2 13.0 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TRAF6_Z2 PF18048.1 NODE_71235_length_221_cov_63.139785_g63294_i0reverse_frame_3 - 0.49 10.5 4.0 0.93 9.6 4.0 1.6 1 1 0 1 1 1 0 TNF receptor-associated factor 6 zinc finger 2 PriA_CRR PF18319.1 NODE_71235_length_221_cov_63.139785_g63294_i0forward_frame_3 - 0.66 10.0 5.4 0.8 9.8 0.7 2.4 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain zf-RING_4 PF14570.6 NODE_71235_length_221_cov_63.139785_g63294_i0forward_frame_3 - 0.93 9.3 5.7 0.5 10.2 3.9 1.5 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Trypan_PARP PF05887.11 NODE_71234_length_221_cov_64.182796_g63293_i0forward_frame_3 - 0.099 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) HCV_NS5a_1a PF08300.13 NODE_71231_length_221_cov_70.376344_g63290_i0reverse_frame_2 - 0.6 10.3 4.0 7.1 6.8 0.4 2.5 1 1 1 2 2 2 0 Hepatitis C virus non-structural 5a zinc finger domain DUF2652 PF10851.8 NODE_71228_length_221_cov_76.618280_g63287_i0reverse_frame_3 - 0.0095 16.1 2.5 0.011 15.8 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2652) Aph-1 PF06105.12 NODE_71228_length_221_cov_76.618280_g63287_i0reverse_frame_3 - 0.04 13.3 0.4 0.045 13.1 0.4 1.0 1 0 0 1 1 1 0 Aph-1 protein Init_tRNA_PT PF04179.12 NODE_71228_length_221_cov_76.618280_g63287_i0reverse_frame_3 - 0.14 12.5 2.2 0.16 12.3 2.2 1.1 1 0 0 1 1 1 0 Rit1 DUSP-like domain FLILHELTA PF10306.9 NODE_71226_length_221_cov_77.569892_g63285_i0forward_frame_3 - 0.0047 17.3 0.0 0.0058 17.0 0.0 1.2 1 0 0 1 1 1 1 Hypothetical protein FLILHELTA LYRIC PF15686.5 NODE_71222_length_221_cov_88.150538_g63281_i0reverse_frame_2 - 0.21 11.1 4.5 0.25 10.9 4.5 1.0 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family Kinocilin PF15033.6 NODE_71220_length_221_cov_122.075269_g63279_i0reverse_frame_2 - 0.082 12.6 0.0 0.091 12.4 0.0 1.1 1 0 0 1 1 1 0 Kinocilin protein DNA_ligase_IV PF11411.8 NODE_71218_length_221_cov_122.500000_g63277_i0reverse_frame_2 - 0.055 13.6 0.7 0.1 12.8 0.7 1.4 1 0 0 1 1 1 0 DNA ligase IV Peptidase_M6 PF05547.11 NODE_71218_length_221_cov_122.500000_g63277_i0reverse_frame_2 - 0.57 8.4 5.0 0.64 8.3 5.0 1.0 1 0 0 1 1 1 0 Immune inhibitor A peptidase M6 Presenilin PF01080.17 NODE_71218_length_221_cov_122.500000_g63277_i0forward_frame_2 - 1.8 7.2 9.5 1.9 7.1 9.5 1.0 1 0 0 1 1 1 0 Presenilin Vpu PF00558.19 NODE_71218_length_221_cov_122.500000_g63277_i0forward_frame_2 - 6.9 6.5 9.4 9.5 6.1 9.4 1.3 1 0 0 1 1 1 0 Vpu protein DUF956 PF06115.11 NODE_71217_length_221_cov_134.559140_g63276_i0forward_frame_3 - 0.019 14.7 0.2 0.026 14.2 0.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF956) Herpes_LAMP2 PF06126.11 NODE_71213_length_221_cov_173.827957_g63272_i0reverse_frame_3 - 0.013 14.2 0.6 0.014 14.1 0.6 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 Phage_CRI PF05144.14 NODE_71213_length_221_cov_173.827957_g63272_i0reverse_frame_3 - 0.053 12.8 1.1 0.056 12.8 1.1 1.1 1 0 0 1 1 1 0 Phage replication protein CRI UPF0004 PF00919.20 NODE_71211_length_221_cov_246.881720_g63270_i0reverse_frame_2 - 0.048 13.7 0.4 0.052 13.6 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0004 p31comet PF06581.12 NODE_71211_length_221_cov_246.881720_g63270_i0reverse_frame_2 - 0.12 11.5 1.8 0.13 11.4 1.8 1.0 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding DUF3917 PF13055.6 NODE_71209_length_221_cov_315.865591_g63268_i0reverse_frame_3 - 0.13 12.7 3.2 0.16 12.5 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3917) TMEM71 PF15121.6 NODE_71204_length_221_cov_1864.236559_g63263_i0forward_frame_3 - 0.46 10.2 4.4 0.5 10.0 4.4 1.2 1 0 0 1 1 1 0 TMEM71 protein family DDE_3 PF13358.6 NODE_71203_length_222_cov_0.818182_g63262_i0forward_frame_2 - 3.5e-05 23.6 0.1 5.3e-05 23.0 0.1 1.3 1 1 0 1 1 1 1 DDE superfamily endonuclease hNIFK_binding PF12196.8 NODE_71197_length_222_cov_0.855615_g63256_i0reverse_frame_3 - 2.3 7.7 4.9 0.38 10.3 1.2 1.7 2 0 0 2 2 2 0 FHA Ki67 binding domain of hNIFK CATSPERG PF15064.6 NODE_71197_length_222_cov_0.855615_g63256_i0reverse_frame_2 - 0.12 10.2 0.2 0.12 10.1 0.2 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit gamma PSCyt2 PF07583.11 NODE_71197_length_222_cov_0.855615_g63256_i0forward_frame_3 - 0.11 12.4 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1549) Gp45_2 PF17470.2 NODE_71196_length_222_cov_0.855615_g63255_i0reverse_frame_2 - 0.0078 16.2 0.2 0.012 15.6 0.2 1.3 1 0 0 1 1 1 1 Phage gene product 45.2 GAT PF03127.14 NODE_71196_length_222_cov_0.855615_g63255_i0reverse_frame_2 - 0.062 13.6 0.4 0.086 13.2 0.4 1.4 1 1 0 1 1 1 0 GAT domain DUF4342 PF14242.6 NODE_71196_length_222_cov_0.855615_g63255_i0reverse_frame_2 - 0.13 12.3 0.4 0.17 11.9 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) CENP-I PF07778.11 NODE_71196_length_222_cov_0.855615_g63255_i0forward_frame_3 - 0.026 13.2 0.6 0.028 13.1 0.6 1.0 1 0 0 1 1 1 0 Mis6 R3H PF01424.22 NODE_71193_length_222_cov_0.855615_g63252_i0reverse_frame_2 - 0.0044 17.0 0.0 0.0054 16.7 0.0 1.2 1 0 0 1 1 1 1 R3H domain Mak16 PF04874.14 NODE_71188_length_222_cov_0.941176_g63247_i0reverse_frame_2 - 0.021 15.4 5.7 0.025 15.2 5.7 1.0 1 0 0 1 1 1 0 Mak16 protein C-terminal region LRR19-TM PF15176.6 NODE_71188_length_222_cov_0.941176_g63247_i0reverse_frame_2 - 5.5 7.0 9.0 48 4.0 9.0 1.9 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Vps16_C PF04840.12 NODE_71187_length_222_cov_1.016043_g63246_i0forward_frame_3 - 0.065 12.3 0.2 0.075 12.1 0.2 1.1 1 0 0 1 1 1 0 Vps16, C-terminal region TP1 PF02079.16 NODE_71185_length_222_cov_1.037433_g63244_i0reverse_frame_2 - 0.025 14.5 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 Nuclear transition protein 1 DCX PF03607.17 NODE_71178_length_222_cov_1.069519_g63237_i0forward_frame_3 - 0.12 12.5 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Doublecortin TPR_7 PF13176.6 NODE_71178_length_222_cov_1.069519_g63237_i0forward_frame_2 - 0.086 12.9 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_71178_length_222_cov_1.069519_g63237_i0forward_frame_2 - 0.097 12.8 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat LRR_3 PF07725.12 NODE_71177_length_222_cov_1.117647_g63236_i0reverse_frame_2 - 0.098 12.5 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 Leucine Rich Repeat Rpp20 PF12328.8 NODE_71176_length_222_cov_1.144385_g63235_i0forward_frame_2 - 0.017 15.1 0.4 0.019 14.9 0.4 1.1 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P TraU PF06834.11 NODE_71172_length_222_cov_1.165775_g63231_i0reverse_frame_2 - 0.013 14.8 0.1 0.014 14.7 0.1 1.0 1 0 0 1 1 1 0 TraU protein DUF3902 PF13042.6 NODE_71170_length_222_cov_1.176471_g63229_i0forward_frame_2 - 0.076 12.6 0.3 0.08 12.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3902) CAT PF00302.18 NODE_71169_length_222_cov_1.187166_g63228_i0forward_frame_2 - 0.038 13.9 0.1 0.047 13.6 0.1 1.1 1 0 0 1 1 1 0 Chloramphenicol acetyltransferase Corona_M PF01635.18 NODE_71168_length_222_cov_1.192513_g63227_i0forward_frame_3 - 0.043 13.1 2.5 0.048 13.0 2.5 1.0 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein PCYCGC PF13798.6 NODE_71168_length_222_cov_1.192513_g63227_i0forward_frame_2 - 0.13 12.1 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function with PCYCGC motif RepA1_leader PF08048.12 NODE_71167_length_222_cov_1.192513_g63226_i0forward_frame_3 - 0.059 13.6 1.6 0.059 13.6 1.6 2.1 3 0 0 3 3 3 0 Tap RepA1 leader peptide Aquarius_N PF16399.5 NODE_71165_length_222_cov_1.192513_g63224_i0reverse_frame_3 - 0.0016 16.6 0.2 0.0018 16.5 0.2 1.0 1 0 0 1 1 1 1 Intron-binding protein aquarius N-terminus Baculo_8kDa PF06096.11 NODE_71162_length_222_cov_1.235294_g63221_i0forward_frame_3 - 0.066 13.3 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Baculoviridae 8.2 KDa protein LysE PF01810.18 NODE_71161_length_222_cov_1.240642_g63220_i0reverse_frame_3 - 0.065 12.7 0.0 0.068 12.6 0.0 1.1 1 0 0 1 1 1 0 LysE type translocator DUF5432 PF17497.2 NODE_71158_length_222_cov_1.262032_g63217_i0reverse_frame_3 - 0.0074 16.4 0.7 0.011 15.8 0.7 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5432) SCP-1 PF05483.12 NODE_71158_length_222_cov_1.262032_g63217_i0reverse_frame_2 - 0.0059 14.7 0.6 0.0068 14.5 0.6 1.0 1 0 0 1 1 1 1 Synaptonemal complex protein 1 (SCP-1) DUF2155 PF09923.9 NODE_71154_length_222_cov_1.272727_g63213_i0reverse_frame_2 - 0.15 12.3 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2155) MerE PF05052.12 NODE_71150_length_222_cov_1.278075_g63209_i0forward_frame_3 - 0.067 13.1 1.2 0.09 12.7 1.2 1.2 1 0 0 1 1 1 0 MerE protein DUF5093 PF17011.5 NODE_71141_length_222_cov_1.283422_g63200_i0forward_frame_3 - 0.0062 16.8 0.1 0.0069 16.7 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5093) ALMT PF11744.8 NODE_71137_length_222_cov_1.331551_g63196_i0reverse_frame_3 - 0.23 10.3 0.0 0.27 10.0 0.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Vanabin-2 PF11437.8 NODE_71137_length_222_cov_1.331551_g63196_i0reverse_frame_2 - 0.018 15.2 2.0 0.022 14.9 2.0 1.1 1 0 0 1 1 1 0 Vanadium-binding protein 2 RELT PF12606.8 NODE_71135_length_222_cov_1.342246_g63194_i0reverse_frame_2 - 0.053 12.5 0.0 0.091 11.8 0.0 1.3 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Hex_IIIa PF02455.16 NODE_71134_length_222_cov_1.347594_g63193_i0forward_frame_3 - 0.044 12.6 0.0 0.047 12.5 0.0 1.0 1 0 0 1 1 1 0 Hexon-associated protein (IIIa) Nif11 PF07862.11 NODE_71134_length_222_cov_1.347594_g63193_i0forward_frame_2 - 0.0055 17.0 0.2 0.014 15.7 0.1 1.6 2 0 0 2 2 2 1 Nif11 domain Chlam_PMP PF02415.17 NODE_71131_length_222_cov_1.363636_g63190_i0reverse_frame_3 - 7.7e-05 22.9 9.3 0.0058 17.0 4.0 2.4 2 0 0 2 2 2 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat ApeA_NTD1 PF18862.1 NODE_71131_length_222_cov_1.363636_g63190_i0forward_frame_2 - 0.8 9.2 4.1 0.88 9.1 4.1 1.1 1 0 0 1 1 1 0 ApeA N-terminal domain 1 DUF5546 PF17700.1 NODE_71128_length_222_cov_1.401070_g63187_i0reverse_frame_3 - 0.036 14.4 0.0 0.044 14.1 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5546) AvrLm4-7 PF18661.1 NODE_71128_length_222_cov_1.401070_g63187_i0forward_frame_3 - 0.045 14.8 0.0 0.053 14.5 0.0 1.1 1 0 0 1 1 1 0 Avirulence Effector AvrLm4-7 Sod_Fe_C PF02777.18 NODE_71124_length_222_cov_1.411765_g63183_i0forward_frame_2 - 9.3e-05 22.5 0.3 0.00013 22.1 0.3 1.2 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain BK_channel_a PF03493.18 NODE_71120_length_222_cov_1.465241_g63179_i0reverse_frame_2 - 0.074 13.2 0.8 0.08 13.1 0.8 1.1 1 0 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit zf-LSD1 PF06943.12 NODE_71109_length_222_cov_1.502674_g63168_i0reverse_frame_3 - 0.036 13.9 0.5 0.097 12.5 0.3 1.8 2 0 0 2 2 2 0 LSD1 zinc finger PGAP1 PF07819.13 NODE_71109_length_222_cov_1.502674_g63168_i0reverse_frame_3 - 0.049 13.3 0.0 0.05 13.3 0.0 1.0 1 0 0 1 1 1 0 PGAP1-like protein LRRNT PF01462.18 NODE_71109_length_222_cov_1.502674_g63168_i0reverse_frame_3 - 0.07 12.8 2.4 0.15 11.8 2.4 1.6 1 1 0 1 1 1 0 Leucine rich repeat N-terminal domain Thioredoxin_7 PF13899.6 NODE_71109_length_222_cov_1.502674_g63168_i0reverse_frame_3 - 0.57 10.4 1.9 3.1 8.0 0.7 2.1 1 1 1 2 2 2 0 Thioredoxin-like EBV-NA3 PF05009.12 NODE_71107_length_222_cov_1.534759_g63166_i0reverse_frame_3 - 0.13 11.8 0.2 0.12 11.9 0.2 1.0 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) Nrf1_DNA-bind PF10491.9 NODE_71107_length_222_cov_1.534759_g63166_i0reverse_frame_3 - 0.15 11.8 0.1 0.15 11.8 0.1 1.1 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 DUF4452 PF14618.6 NODE_71107_length_222_cov_1.534759_g63166_i0forward_frame_2 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4452) DUF1410 PF07198.11 NODE_71103_length_222_cov_1.577540_g63162_i0forward_frame_2 - 0.01 16.3 1.5 0.065 13.7 1.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1410) PAE PF03283.13 NODE_71099_length_222_cov_1.598930_g63158_i0forward_frame_3 - 0.0069 15.6 0.1 0.0075 15.4 0.1 1.0 1 0 0 1 1 1 1 Pectinacetylesterase Hexokinase_2 PF03727.16 NODE_71098_length_222_cov_1.598930_g63157_i0forward_frame_3 - 0.21 11.0 0.0 0.25 10.7 0.0 1.0 1 0 0 1 1 1 0 Hexokinase NICE-1 PF15845.5 NODE_71097_length_222_cov_1.604278_g63156_i0forward_frame_3 - 0.21 12.4 9.4 0.28 12.0 9.4 1.1 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family BsuPI PF12690.7 NODE_71095_length_222_cov_1.631016_g63154_i0forward_frame_3 - 0.0059 16.6 0.3 0.0068 16.4 0.3 1.1 1 0 0 1 1 1 1 Intracellular proteinase inhibitor UreE_N PF02814.15 NODE_71094_length_222_cov_1.647059_g63153_i0forward_frame_3 - 0.2 11.3 0.0 0.23 11.1 0.0 1.1 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain Bmt2 PF11968.8 NODE_71094_length_222_cov_1.647059_g63153_i0forward_frame_2 - 0.031 14.1 0.1 0.038 13.8 0.1 1.3 1 1 0 1 1 1 0 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 Mitoc_L55 PF09776.9 NODE_71091_length_222_cov_1.663102_g63150_i0forward_frame_3 - 0.023 14.4 0.4 0.03 14.1 0.4 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L55 DUF2129 PF09902.9 NODE_71091_length_222_cov_1.663102_g63150_i0forward_frame_3 - 0.072 13.2 0.3 8 6.6 0.1 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2129) TatD_DNase PF01026.21 NODE_71086_length_222_cov_1.700535_g63145_i0forward_frame_3 - 0.067 12.6 0.0 0.54 9.6 0.0 1.9 1 1 0 1 1 1 0 TatD related DNase Mucin PF01456.17 NODE_71085_length_222_cov_1.705882_g63144_i0reverse_frame_2 - 3.3 7.7 21.6 3.5 7.6 21.6 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein MAGE_N PF12440.8 NODE_71085_length_222_cov_1.705882_g63144_i0reverse_frame_2 - 8.4 7.2 12.0 10 6.8 12.0 1.3 1 0 0 1 1 1 0 Melanoma associated antigen family N terminal DUF5004 PF16395.5 NODE_71084_length_222_cov_1.705882_g63143_i0forward_frame_2 - 0.11 12.5 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5004) MUG113 PF13455.6 NODE_71083_length_222_cov_1.705882_g63142_i0reverse_frame_2 - 0.13 12.9 0.0 0.15 12.7 0.0 1.2 1 0 0 1 1 1 0 Meiotically up-regulated gene 113 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks370.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks370.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks370.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks370.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:25:06 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ald_deCOase PF11266.8 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_2 - 0.057 13.1 1.1 0.058 13.1 1.1 1.1 1 0 0 1 1 1 0 Long-chain fatty aldehyde decarbonylase Seryl_tRNA_N PF02403.22 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_2 - 0.15 12.3 11.3 0.6 10.4 11.5 1.7 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF641 PF04859.12 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_2 - 0.17 12.3 6.8 0.18 12.1 6.8 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) HlyD_D23 PF16576.5 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_2 - 0.19 11.0 2.0 0.22 10.7 2.0 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion DUF4927 PF16279.5 NODE_71081_length_222_cov_1.711230_g63140_i0forward_frame_2 - 0.35 11.9 7.5 0.42 11.7 7.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4927) Prefoldin_2 PF01920.20 NODE_71078_length_222_cov_1.732620_g63137_i0reverse_frame_3 - 0.016 15.2 1.4 0.021 14.8 1.4 1.3 1 0 0 1 1 1 0 Prefoldin subunit Pkinase PF00069.25 NODE_71074_length_222_cov_1.780749_g63133_i0forward_frame_2 - 8.6e-05 22.0 0.0 0.0001 21.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain UPAR_LY6_2 PF16975.5 NODE_71073_length_222_cov_1.780749_g63132_i0reverse_frame_2 - 0.013 15.7 0.2 0.017 15.3 0.2 1.2 1 0 0 1 1 1 0 Ly6/PLAUR domain-containing protein 6, Lypd6 Ac110_PIF PF07280.11 NODE_71071_length_222_cov_1.802139_g63130_i0reverse_frame_3 - 0.15 11.8 2.8 0.14 11.9 1.5 1.7 2 1 0 2 2 2 0 Per os infectivity factor AC110 DUF356 PF04009.12 NODE_71071_length_222_cov_1.802139_g63130_i0forward_frame_2 - 0.017 15.4 0.1 0.02 15.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF356) TMEM132D_C PF15706.5 NODE_71071_length_222_cov_1.802139_g63130_i0forward_frame_2 - 0.078 12.8 0.0 0.097 12.5 0.0 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Saf_2TM PF18303.1 NODE_71058_length_222_cov_1.983957_g63117_i0reverse_frame_2 - 0.0049 16.5 0.2 0.0049 16.5 0.2 1.2 1 0 0 1 1 1 1 SAVED-fused 2TM effector domain Papo_T_antigen PF02380.15 NODE_71056_length_222_cov_1.989305_g63115_i0reverse_frame_2 - 0.012 15.7 1.0 0.016 15.3 1.0 1.2 1 0 0 1 1 1 0 T-antigen specific domain Chlam_PMP PF02415.17 NODE_71056_length_222_cov_1.989305_g63115_i0forward_frame_3 - 3.9e-05 23.9 12.9 0.0058 17.0 4.0 2.4 2 0 0 2 2 2 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ribosomal_60s PF00428.19 NODE_71048_length_222_cov_2.053476_g63107_i0reverse_frame_2 - 0.022 15.3 0.5 0.028 15.0 0.5 1.1 1 0 0 1 1 1 0 60s Acidic ribosomal protein PCSK9_C1 PF18459.1 NODE_71048_length_222_cov_2.053476_g63107_i0reverse_frame_2 - 0.07 13.3 1.1 0.16 12.2 1.1 1.6 1 1 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain DUF3824 PF12868.7 NODE_71048_length_222_cov_2.053476_g63107_i0reverse_frame_2 - 0.83 10.3 5.6 1 10.0 5.6 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) Arm-DNA-bind_5 PF17293.2 NODE_71046_length_222_cov_2.090909_g63105_i0forward_frame_2 - 0.079 13.4 0.0 0.1 13.1 0.0 1.3 1 1 0 1 1 1 0 Arm DNA-binding domain DUF4350 PF14258.6 NODE_71046_length_222_cov_2.090909_g63105_i0forward_frame_2 - 0.18 12.3 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) PGK PF00162.19 NODE_71044_length_222_cov_2.122995_g63103_i0reverse_frame_2 - 1.9e-13 50.1 0.0 2.2e-13 49.9 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase BLOC1_2 PF10046.9 NODE_71044_length_222_cov_2.122995_g63103_i0reverse_frame_2 - 0.099 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 LPD18 PF18832.1 NODE_71044_length_222_cov_2.122995_g63103_i0forward_frame_3 - 0.17 11.9 0.0 0.28 11.3 0.0 1.4 1 1 0 1 1 1 0 Large polyvalent protein-associated domain 18 EKLF_TAD1 PF16832.5 NODE_71043_length_222_cov_2.133690_g63102_i0forward_frame_3 - 1.4 8.8 6.2 2.2 8.2 0.0 2.3 2 0 0 2 2 2 0 Erythroid krueppel-like transcription factor, transactivation 1 Carb_bind PF10645.9 NODE_71042_length_222_cov_2.133690_g63101_i0forward_frame_2 - 0.018 15.3 0.1 0.027 14.7 0.1 1.3 1 0 0 1 1 1 0 Carbohydrate binding BPD_transp_1 PF00528.22 NODE_71041_length_222_cov_2.139037_g63100_i0forward_frame_2 - 7e-13 48.7 0.1 7.6e-13 48.6 0.1 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component LELP1 PF15042.6 NODE_71039_length_222_cov_2.149733_g63098_i0reverse_frame_3 - 0.16 12.3 6.2 0.19 12.1 6.2 1.0 1 0 0 1 1 1 0 Late cornified envelope-like proline-rich protein 1 Mito_fiss_Elm1 PF06258.11 NODE_71029_length_222_cov_2.283422_g63088_i0reverse_frame_3 - 0.14 11.3 0.1 0.14 11.3 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial fission ELM1 RPA_interact_N PF14766.6 NODE_71029_length_222_cov_2.283422_g63088_i0forward_frame_3 - 0.09 12.4 1.5 0.15 11.7 1.5 1.3 1 0 0 1 1 1 0 Replication protein A interacting N-terminal DHHC PF01529.20 NODE_71028_length_222_cov_2.288770_g63087_i0forward_frame_3 - 0.35 11.0 3.0 0.47 10.6 3.0 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase Late_protein_L1 PF00500.18 NODE_71028_length_222_cov_2.288770_g63087_i0forward_frame_2 - 0.033 13.0 0.1 0.037 12.9 0.1 1.0 1 0 0 1 1 1 0 L1 (late) protein Peptidase_M48_N PF16491.5 NODE_71026_length_222_cov_2.310160_g63085_i0reverse_frame_2 - 0.045 13.6 1.3 0.057 13.3 1.3 1.0 1 0 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices Serglycin PF04360.12 NODE_71025_length_222_cov_2.310160_g63084_i0forward_frame_2 - 0.00068 19.6 0.4 0.00073 19.5 0.4 1.1 1 0 0 1 1 1 1 Serglycin DUF4719 PF15843.5 NODE_71025_length_222_cov_2.310160_g63084_i0forward_frame_2 - 0.045 13.9 0.6 0.048 13.8 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) Proton_antipo_M PF00361.20 NODE_71021_length_222_cov_2.352941_g63080_i0reverse_frame_3 - 0.044 13.0 3.1 0.05 12.8 3.1 1.0 1 0 0 1 1 1 0 Proton-conducting membrane transporter DUF5315 PF17242.2 NODE_71021_length_222_cov_2.352941_g63080_i0forward_frame_2 - 0.025 14.4 0.1 0.032 14.0 0.1 1.1 1 0 0 1 1 1 0 Disordered region of unknown function (DUF5315) KRAB PF01352.27 NODE_71021_length_222_cov_2.352941_g63080_i0forward_frame_2 - 0.038 13.6 0.5 0.056 13.1 0.5 1.2 1 0 0 1 1 1 0 KRAB box CAP_N PF01213.19 NODE_71018_length_222_cov_2.475936_g63077_i0forward_frame_3 - 1.6 8.1 5.8 1.6 8.1 5.8 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal zf-HYPF PF07503.12 NODE_71016_length_222_cov_2.497326_g63075_i0reverse_frame_2 - 0.068 12.9 1.0 0.068 12.9 1.0 1.8 2 0 0 2 2 2 0 HypF finger ALMS_motif PF15309.6 NODE_71014_length_222_cov_2.529412_g63073_i0reverse_frame_3 - 2.4e-06 28.1 1.6 2.4e-06 28.0 1.6 1.1 1 0 0 1 1 1 1 ALMS motif AroM PF07302.11 NODE_71014_length_222_cov_2.529412_g63073_i0reverse_frame_3 - 0.14 11.5 0.0 0.15 11.4 0.0 1.1 1 0 0 1 1 1 0 AroM protein Porin_OmpG PF09381.10 NODE_71012_length_222_cov_2.631016_g63071_i0reverse_frame_2 - 1.6e-17 64.2 0.1 1.9e-17 64.0 0.1 1.0 1 0 0 1 1 1 1 Outer membrane protein G (OmpG) DUF1233 PF06806.12 NODE_71009_length_222_cov_2.828877_g63068_i0reverse_frame_2 - 0.094 12.3 0.4 0.14 11.8 0.1 1.5 2 0 0 2 2 2 0 Putative excisionase (DUF1233) Nramp PF01566.18 NODE_71009_length_222_cov_2.828877_g63068_i0forward_frame_3 - 3.9e-24 85.3 1.7 4.3e-24 85.2 1.7 1.0 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein Requiem_N PF14051.6 NODE_71008_length_222_cov_2.828877_g63067_i0reverse_frame_2 - 0.055 13.7 0.1 0.073 13.3 0.1 1.2 1 0 0 1 1 1 0 N-terminal domain of DPF2/REQ. HTH_1 PF00126.27 NODE_71003_length_222_cov_2.930481_g63062_i0reverse_frame_2 - 8.5e-12 44.8 0.2 1.1e-11 44.5 0.2 1.2 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family Glyco_hydro_14 PF01373.17 NODE_71003_length_222_cov_2.930481_g63062_i0forward_frame_2 - 0.21 10.5 0.4 0.25 10.3 0.4 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 14 CAF1 PF04857.20 NODE_71000_length_222_cov_3.048128_g63059_i0reverse_frame_3 - 1.6e-07 30.8 0.0 1.7e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 CAF1 family ribonuclease PSI_PSAK PF01241.18 NODE_71000_length_222_cov_3.048128_g63059_i0forward_frame_3 - 0.13 12.3 0.0 0.17 11.9 0.0 1.4 1 1 0 1 1 1 0 Photosystem I psaG / psaK TerC PF03741.16 NODE_70999_length_222_cov_3.106952_g63058_i0reverse_frame_2 - 0.031 14.0 0.3 0.031 13.9 0.3 1.1 1 0 0 1 1 1 0 Integral membrane protein TerC family PND PF17949.1 NODE_70998_length_222_cov_3.197861_g63057_i0forward_frame_3 - 0.00078 19.7 0.0 0.00083 19.6 0.0 1.1 1 0 0 1 1 1 1 FANCM pseudonuclease domain Hepatitis_core PF00906.20 NODE_70994_length_222_cov_3.406417_g63053_i0forward_frame_2 - 0.16 11.5 0.1 0.18 11.3 0.1 1.0 1 0 0 1 1 1 0 Hepatitis core antigen Phage_holin_2_2 PF10746.9 NODE_70993_length_222_cov_3.411765_g63052_i0reverse_frame_2 - 0.22 11.2 5.1 1.9 8.2 0.5 2.2 2 0 0 2 2 2 0 Phage holin T7 family, holin superfamily II MLD PF11647.8 NODE_70993_length_222_cov_3.411765_g63052_i0reverse_frame_2 - 0.23 11.7 1.6 15 6.0 0.2 2.1 2 0 0 2 2 2 0 Membrane Localization Domain LRR_6 PF13516.6 NODE_70993_length_222_cov_3.411765_g63052_i0forward_frame_2 - 7.6e-05 22.5 2.2 0.23 11.6 0.0 2.4 2 0 0 2 2 2 2 Leucine Rich repeat LRR_8 PF13855.6 NODE_70993_length_222_cov_3.411765_g63052_i0forward_frame_2 - 0.00013 21.6 3.5 0.01 15.6 3.6 2.2 1 1 0 1 1 1 1 Leucine rich repeat LRR_1 PF00560.33 NODE_70993_length_222_cov_3.411765_g63052_i0forward_frame_2 - 0.00023 21.3 2.2 0.46 11.2 0.2 2.6 2 0 0 2 2 2 2 Leucine Rich Repeat LRR_4 PF12799.7 NODE_70993_length_222_cov_3.411765_g63052_i0forward_frame_2 - 0.0003 21.1 3.8 0.0012 19.2 3.8 1.9 1 1 0 1 1 1 1 Leucine Rich repeats (2 copies) CFEM PF05730.11 NODE_70988_length_222_cov_3.844920_g63047_i0reverse_frame_3 - 0.02 15.0 0.4 0.024 14.7 0.4 1.2 1 0 0 1 1 1 0 CFEM domain COX8 PF02285.15 NODE_70987_length_222_cov_3.925134_g63046_i0reverse_frame_3 - 0.17 11.8 0.5 0.28 11.1 0.5 1.3 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII Zn_Tnp_IS1595 PF12760.7 NODE_70987_length_222_cov_3.925134_g63046_i0reverse_frame_2 - 0.0033 17.4 3.6 0.54 10.3 0.1 2.2 2 0 0 2 2 2 2 Transposase zinc-ribbon domain AMNp_N PF10423.9 NODE_70984_length_222_cov_4.160428_g63043_i0forward_frame_2 - 0.069 12.8 0.0 0.072 12.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial AMP nucleoside phosphorylase N-terminus DEFB136 PF17333.2 NODE_70982_length_222_cov_4.336898_g63041_i0forward_frame_3 - 3.3 7.7 15.4 33 4.5 15.4 2.5 1 1 0 1 1 1 0 Beta defensin 136 Lamprin PF06403.11 NODE_70980_length_222_cov_4.925134_g63039_i0reverse_frame_2 - 1.9 8.4 7.4 5.2 7.0 7.4 1.6 1 1 0 1 1 1 0 Lamprin DUF2116 PF09889.9 NODE_70978_length_222_cov_6.529412_g63037_i0reverse_frame_3 - 0.32 11.0 2.1 0.53 10.3 2.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) TF_AP-2 PF03299.14 NODE_70976_length_222_cov_12.727273_g63035_i0forward_frame_3 - 0.0043 17.0 0.2 0.0045 17.0 0.2 1.1 1 0 0 1 1 1 1 Transcription factor AP-2 HEAT PF02985.22 NODE_70976_length_222_cov_12.727273_g63035_i0forward_frame_3 - 0.026 14.7 0.1 0.064 13.5 0.0 1.7 2 0 0 2 2 2 0 HEAT repeat DUF5049 PF16468.5 NODE_70976_length_222_cov_12.727273_g63035_i0forward_frame_3 - 0.083 12.8 0.0 0.13 12.1 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5049) muHD PF10291.9 NODE_70974_length_222_cov_20.187166_g63033_i0forward_frame_2 - 0.04 13.4 0.2 0.044 13.2 0.2 1.0 1 0 0 1 1 1 0 Muniscin C-terminal mu homology domain Phage_T4_gp36 PF03903.13 NODE_70974_length_222_cov_20.187166_g63033_i0forward_frame_2 - 0.082 12.9 0.0 0.085 12.8 0.0 1.0 1 0 0 1 1 1 0 Phage T4 tail fibre Kinesin_assoc PF16183.5 NODE_70967_length_222_cov_29.732620_g63026_i0reverse_frame_3 - 0.0022 18.2 0.0 0.0023 18.1 0.0 1.1 1 0 0 1 1 1 1 Kinesin-associated DUF3667 PF12412.8 NODE_70967_length_222_cov_29.732620_g63026_i0forward_frame_2 - 0.19 11.2 0.0 0.19 11.2 0.0 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF3667) LapA_dom PF06305.11 NODE_70966_length_222_cov_31.181818_g63025_i0reverse_frame_2 - 0.035 13.9 0.0 0.044 13.6 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Ribosomal_60s PF00428.19 NODE_70964_length_222_cov_33.882353_g63023_i0reverse_frame_3 - 10 6.8 10.9 1.1 9.9 7.0 1.4 2 0 0 2 2 2 0 60s Acidic ribosomal protein CALCOCO1 PF07888.11 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.00074 18.5 9.5 0.00074 18.5 9.5 1.0 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like TPR_MLP1_2 PF07926.12 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.013 15.6 6.9 0.014 15.5 6.9 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein ZapD PF07072.11 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.035 13.8 2.9 0.038 13.7 2.9 1.1 1 0 0 1 1 1 0 Cell division protein DUF4795 PF16043.5 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.058 13.0 7.3 0.064 12.8 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF5082 PF16888.5 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.059 13.6 6.7 0.058 13.7 3.6 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Tho2 PF11262.8 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.073 12.3 8.8 0.083 12.1 8.8 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 AAA_23 PF13476.6 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.075 13.5 12.0 0.079 13.4 12.0 1.0 1 0 0 1 1 1 0 AAA domain DUF1664 PF07889.12 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.1 12.6 3.0 0.12 12.5 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.11 12.9 4.2 0.19 12.2 4.2 1.6 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) GrpE PF01025.19 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.14 11.8 11.3 0.21 11.2 11.3 1.4 1 1 1 2 2 2 0 GrpE Lge1 PF11488.8 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.19 12.0 7.5 0.27 11.4 7.5 1.3 1 1 0 1 1 1 0 Transcriptional regulatory protein LGE1 Spc24 PF08286.11 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.23 11.7 5.1 0.29 11.4 5.1 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF3450 PF11932.8 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.24 10.7 5.8 0.25 10.6 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Prefoldin_2 PF01920.20 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.44 10.5 13.5 0.92 9.5 0.6 2.1 1 1 1 2 2 2 0 Prefoldin subunit DivIC PF04977.15 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.44 10.3 7.8 0.78 9.6 7.8 1.5 1 1 0 1 1 1 0 Septum formation initiator DUF4337 PF14235.6 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.62 10.2 6.9 0.64 10.1 6.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) TMPIT PF07851.13 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.66 9.2 5.0 0.65 9.2 5.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF3847 PF12958.7 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 0.91 9.7 12.4 0.43 10.7 6.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3847) Med21 PF11221.8 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 1 9.6 7.0 1.3 9.3 7.0 1.2 1 0 0 1 1 1 0 Subunit 21 of Mediator complex GTP-bdg_M PF16360.5 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 1.4 9.5 8.9 0.26 11.9 1.8 2.1 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region DUF3987 PF13148.6 NODE_70961_length_222_cov_39.486631_g63020_i0reverse_frame_2 - 1.8 7.5 6.3 2 7.3 6.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) LRRCT PF01463.24 NODE_70954_length_222_cov_46.331551_g63013_i0reverse_frame_3 - 0.045 14.3 0.8 0.6 10.8 0.1 2.7 2 0 0 2 2 2 0 Leucine rich repeat C-terminal domain WSC PF01822.19 NODE_70954_length_222_cov_46.331551_g63013_i0forward_frame_2 - 0.013 15.7 1.6 0.016 15.3 1.6 1.2 1 0 0 1 1 1 0 WSC domain Daxx PF03344.15 NODE_70952_length_222_cov_46.502674_g63011_i0reverse_frame_3 - 0.0089 16.1 1.7 0.01 15.9 1.7 1.3 1 1 0 1 1 1 1 Daxx N-terminal Rassf1C-interacting domain Noggin PF05806.12 NODE_70950_length_222_cov_47.802139_g63009_i0reverse_frame_2 - 0.028 14.4 8.9 0.027 14.4 8.9 1.1 1 0 0 1 1 1 0 Noggin Glyco_transf_36 PF06165.11 NODE_70950_length_222_cov_47.802139_g63009_i0forward_frame_2 - 0.048 13.1 0.0 0.05 13.0 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 36 Myosin_tail_1 PF01576.19 NODE_70944_length_222_cov_53.283422_g63003_i0forward_frame_2 - 0.015 13.2 0.1 0.015 13.2 0.1 1.0 1 0 0 1 1 1 0 Myosin tail Het-C PF07217.11 NODE_70944_length_222_cov_53.283422_g63003_i0forward_frame_2 - 0.089 11.3 0.0 0.095 11.2 0.0 1.0 1 0 0 1 1 1 0 Heterokaryon incompatibility protein Het-C Rbsn PF11464.8 NODE_70944_length_222_cov_53.283422_g63003_i0forward_frame_2 - 0.14 11.9 1.8 0.2 11.4 1.8 1.2 1 0 0 1 1 1 0 Rabenosyn Rab binding domain DUF1263 PF06882.12 NODE_70941_length_222_cov_55.336898_g63000_i0forward_frame_3 - 0.014 15.4 0.0 0.019 15.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1263) FYRN PF05964.14 NODE_70940_length_222_cov_55.893048_g62999_i0reverse_frame_3 - 0.15 11.9 1.6 0.22 11.4 1.6 1.3 1 0 0 1 1 1 0 F/Y-rich N-terminus GPHH PF16905.5 NODE_70939_length_222_cov_55.989305_g62998_i0reverse_frame_2 - 8.5e-09 35.1 0.0 1.1e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 Voltage-dependent L-type calcium channel, IQ-associated EF-hand_1 PF00036.32 NODE_70939_length_222_cov_55.989305_g62998_i0reverse_frame_2 - 0.013 15.0 0.7 0.019 14.5 0.1 1.6 2 0 0 2 2 2 0 EF hand EF-hand_6 PF13405.6 NODE_70939_length_222_cov_55.989305_g62998_i0reverse_frame_2 - 0.039 13.9 0.4 0.097 12.7 0.1 1.8 2 0 0 2 2 2 0 EF-hand domain Ank_2 PF12796.7 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 1.7e-06 28.5 0.1 1.9e-06 28.4 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 8.8e-06 25.9 0.1 1.1e-05 25.6 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 3.9e-05 23.9 0.7 0.00027 21.3 0.1 2.0 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.0023 18.5 0.0 0.0035 17.9 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.0066 16.9 0.2 0.022 15.3 0.1 1.8 2 0 0 2 2 2 1 Ankyrin repeat Asparaginase_II PF06089.12 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.0082 15.2 0.3 0.0092 15.0 0.3 1.0 1 0 0 1 1 1 1 L-asparaginase II PK_C PF02887.16 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.034 14.4 0.1 0.036 14.3 0.1 1.1 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain Protocadherin PF08374.11 NODE_70933_length_222_cov_66.951872_g62992_i0reverse_frame_2 - 0.046 13.7 0.1 0.048 13.6 0.1 1.1 1 0 0 1 1 1 0 Protocadherin Ependymin PF00811.18 NODE_70931_length_222_cov_70.074866_g62990_i0reverse_frame_2 - 0.074 13.3 0.0 0.088 13.1 0.0 1.0 1 0 0 1 1 1 0 Ependymin DUF1980 PF09323.10 NODE_70929_length_222_cov_80.213904_g62988_i0forward_frame_2 - 1.9 8.4 7.0 2.6 7.9 7.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) DUF2441 PF10386.9 NODE_70928_length_222_cov_81.556150_g62987_i0forward_frame_3 - 0.0064 16.5 0.2 0.0085 16.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2441) OmdA PF13376.6 NODE_70928_length_222_cov_81.556150_g62987_i0forward_frame_2 - 0.047 13.7 0.1 0.064 13.3 0.1 1.2 1 0 0 1 1 1 0 Bacteriocin-protection, YdeI or OmpD-Associated Aa_trans PF01490.18 NODE_70927_length_222_cov_94.807487_g62986_i0reverse_frame_3 - 0.023 13.4 6.4 0.025 13.3 6.4 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein ChapFlgA_N PF17656.1 NODE_70925_length_222_cov_100.219251_g62984_i0forward_frame_3 - 0.04 14.1 0.1 0.054 13.7 0.1 1.3 1 0 0 1 1 1 0 FlgA N-terminal domain EGF_3 PF12947.7 NODE_70924_length_222_cov_105.294118_g62983_i0reverse_frame_3 - 0.0048 17.1 2.1 0.0048 17.1 2.1 2.2 2 1 0 2 2 2 1 EGF domain MP PF01107.18 NODE_70924_length_222_cov_105.294118_g62983_i0reverse_frame_3 - 0.2 11.2 0.0 0.27 10.8 0.0 1.1 1 0 0 1 1 1 0 Viral movement protein (MP) PRIMA1 PF16101.5 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_2 - 2.2 8.4 7.9 2.6 8.1 7.9 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_2 - 4.3 6.7 10.5 5 6.5 10.5 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_70921_length_222_cov_113.379679_g62980_i0reverse_frame_2 - 7.2 6.6 6.9 7.9 6.5 6.9 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator DUF3824 PF12868.7 NODE_70921_length_222_cov_113.379679_g62980_i0forward_frame_2 - 0.44 11.2 16.9 0.54 10.9 16.9 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) DUF333 PF03891.15 NODE_70919_length_222_cov_117.524064_g62978_i0forward_frame_2 - 0.04 14.1 0.0 1.2 9.3 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF333) DUF2523 PF10734.9 NODE_70915_length_222_cov_131.588235_g62974_i0reverse_frame_3 - 0.019 15.5 0.0 0.027 15.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2523) Defensin_1 PF00323.19 NODE_70915_length_222_cov_131.588235_g62974_i0forward_frame_3 - 0.033 14.7 1.0 0.064 13.8 1.0 1.5 1 0 0 1 1 1 0 Mammalian defensin MVP_shoulder PF11978.8 NODE_70914_length_222_cov_138.139037_g62973_i0reverse_frame_2 - 0.031 14.3 0.0 0.034 14.2 0.0 1.1 1 0 0 1 1 1 0 Shoulder domain UbiA PF01040.18 NODE_70914_length_222_cov_138.139037_g62973_i0forward_frame_3 - 0.08 12.2 0.1 0.093 12.0 0.1 1.0 1 0 0 1 1 1 0 UbiA prenyltransferase family DUF4560 PF15118.6 NODE_70913_length_222_cov_157.844920_g62972_i0reverse_frame_2 - 0.013 15.3 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4560) DUF2866 PF11065.8 NODE_70910_length_222_cov_174.213904_g62969_i0reverse_frame_3 - 0.069 13.2 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2866) Dpy19 PF10034.9 NODE_70910_length_222_cov_174.213904_g62969_i0forward_frame_2 - 0.021 13.0 0.1 0.023 12.9 0.1 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation TrbM PF07424.11 NODE_70907_length_222_cov_195.604278_g62966_i0forward_frame_2 - 0.16 11.9 0.6 0.21 11.5 0.6 1.2 1 0 0 1 1 1 0 TrbM Prok-JAB PF14464.6 NODE_70904_length_222_cov_241.668449_g62963_i0reverse_frame_3 - 0.0011 18.7 0.1 0.0012 18.6 0.1 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain HSA PF07529.13 NODE_70904_length_222_cov_241.668449_g62963_i0reverse_frame_3 - 0.018 15.4 0.2 0.023 15.0 0.2 1.1 1 0 0 1 1 1 0 HSA DUF3873 PF12989.7 NODE_70903_length_222_cov_252.844920_g62962_i0forward_frame_2 - 0.034 14.5 0.0 0.053 13.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3873) Toxin_23 PF08093.11 NODE_70902_length_222_cov_357.748663_g62961_i0forward_frame_2 - 0.015 15.4 0.6 0.015 15.4 0.6 1.6 2 0 0 2 2 2 0 Magi 5 toxic peptide family FixQ PF05545.11 ORF99943 - 0.16 12.0 2.7 0.23 11.5 2.7 1.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ YqfD PF06898.11 ORF99943 - 1.2 7.9 2.5 1.4 7.7 2.5 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD zf-SAP30 PF13866.6 ORF9986 - 0.17 12.1 4.3 0.95 9.6 0.9 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger Pox_G9-A16 PF03003.16 ORF99298 - 0.015 15.0 0.5 0.016 14.9 0.5 1.1 1 0 0 1 1 1 0 Pox virus entry-fusion-complex G9/A16 zinc-ribbons_6 PF07191.12 ORF99068 - 0.002 18.1 3.0 0.0027 17.6 3.0 1.3 1 0 0 1 1 1 1 zinc-ribbons Gemin6 PF06372.12 ORF98789 - 0.08 12.5 1.1 0.088 12.3 1.1 1.0 1 0 0 1 1 1 0 Gemin6 protein F-box-like PF12937.7 ORF98505 - 0.14 12.0 0.1 0.2 11.6 0.1 1.3 1 0 0 1 1 1 0 F-box-like Nrap_D3 PF17404.2 ORF98488 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF98488 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R DUF3918 PF13056.6 ORF98079 - 0.19 11.3 0.1 0.19 11.3 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) DM13 PF10517.9 ORF97786 - 0.1 13.2 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Electron transfer DM13 DUF2769 PF10967.8 ORF97297 - 0.0049 17.5 4.2 0.011 16.4 4.1 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF2769) UL2 PF08196.11 ORF96918 - 0.036 14.0 0.3 0.067 13.2 0.3 1.5 1 0 0 1 1 1 0 UL2 protein DUF3328 PF11807.8 ORF96783 - 0.67 9.7 4.4 0.7 9.6 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) CrgA PF06781.12 ORF96746 - 0.068 13.2 0.0 0.076 13.1 0.0 1.1 1 0 0 1 1 1 0 Cell division protein CrgA Rad10 PF03834.14 ORF96271 - 0.061 13.4 0.1 0.073 13.1 0.1 1.0 1 0 0 1 1 1 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) Vir_act_alpha_C PF10400.9 ORF95741 - 0.0022 18.6 0.1 0.0028 18.3 0.1 1.2 1 0 0 1 1 1 1 Virulence activator alpha C-term ISP3_C PF18045.1 ORF95140 - 0.013 15.4 0.0 0.013 15.4 0.0 1.1 1 0 0 1 1 1 0 ISP3 C-terminal Nrap_D3 PF17404.2 ORF95078 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF95078 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R Peroxidase_ext PF11895.8 ORF93769 - 0.042 13.8 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 Fungal peroxidase extension region PsaM PF07465.13 ORF92946 - 0.0092 15.7 0.5 0.0092 15.7 0.5 1.8 2 0 0 2 2 2 1 Photosystem I protein M (PsaM) KGK PF08872.10 ORF92749 - 0.021 15.3 0.1 0.023 15.1 0.1 1.1 1 0 0 1 1 1 0 KGK domain Cytochrome_CBB3 PF13442.6 ORF92280 - 0.021 15.1 0.0 0.025 14.9 0.0 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III DUF5409 PF17421.2 ORF92195 - 0.059 14.1 1.6 0.07 13.9 1.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) SIP1 PF04938.12 ORF92195 - 0.1 12.3 0.1 0.8 9.4 0.1 2.0 1 1 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) ubiquitin PF00240.23 ORF91893 - 2e-06 27.5 0.1 7.5e-06 25.6 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF91893 - 1.9e-05 25.0 0.1 0.00011 22.6 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Baculo_RING PF05883.11 ORF91893 - 0.024 14.6 0.5 0.025 14.6 0.5 1.1 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain UN_NPL4 PF11543.8 ORF91893 - 0.072 13.6 0.0 0.087 13.3 0.0 1.2 1 1 0 1 1 1 0 Nuclear pore localisation protein NPL4 MCLC PF05934.11 ORF91289 - 0.58 8.8 2.4 0.56 8.9 2.4 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Vac7 PF12751.7 ORF90970 - 0.003 17.1 0.1 0.0037 16.8 0.1 1.0 1 0 0 1 1 1 1 Vacuolar segregation subunit 7 Spp-24 PF07448.11 ORF90958 - 0.13 12.4 1.4 0.18 12.0 1.4 1.2 1 0 0 1 1 1 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain Peroxidase_ext PF11895.8 ORF90763 - 0.042 13.8 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 Fungal peroxidase extension region Zf_RING PF16744.5 ORF89727 - 0.0044 17.1 0.6 0.0053 16.8 0.6 1.2 1 0 0 1 1 1 1 KIAA1045 RING finger DUF2304 PF10066.9 ORF88148 - 0.2 11.9 8.7 0.23 11.7 8.7 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) Epiglycanin_C PF14654.6 ORF88115 - 1.5 8.9 6.6 0.12 12.5 1.8 1.6 1 1 1 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region IncFII_repA PF02387.15 ORF87650 - 0.17 11.1 0.1 0.19 10.9 0.1 1.1 1 0 0 1 1 1 0 IncFII RepA protein family Prp18 PF02840.15 ORF86560 - 0.1 12.6 0.5 0.13 12.4 0.4 1.3 1 1 0 1 1 1 0 Prp18 domain Keratin_B2_2 PF13885.6 ORF86196 - 3.9 7.5 17.4 1.9 8.5 10.3 2.5 1 1 1 2 2 2 0 Keratin, high sulfur B2 protein MBT PF02820.18 ORF86074 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat Ephrin_rec_like PF07699.13 ORF85775 - 0.012 15.3 1.4 0.022 14.5 0.3 1.9 2 0 0 2 2 2 0 Putative ephrin-receptor like DUF4187 PF13821.6 ORF85679 - 0.0058 16.4 0.3 0.0084 15.9 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4187) RIX1 PF08167.12 ORF85604 - 0.14 11.9 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis HpaB_N PF11794.8 ORF84862 - 0.16 11.6 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal L27_2 PF09045.10 ORF84557 - 0.088 12.8 0.3 0.12 12.4 0.3 1.4 1 0 0 1 1 1 0 L27_2 TIP41 PF04176.13 ORF84557 - 0.099 12.1 0.7 0.11 12.0 0.7 1.1 1 0 0 1 1 1 0 TIP41-like family Pico_P2A PF00947.19 ORF83748 - 0.083 12.9 0.0 0.087 12.9 0.0 1.0 1 0 0 1 1 1 0 Picornavirus core protein 2A Zmiz1_N PF18028.1 ORF83603 - 0.18 12.2 3.9 0.63 10.4 3.9 1.7 1 1 0 1 1 1 0 Zmiz1 N-terminal tetratricopeptide repeat domain PI3K_rbd PF00794.18 ORF83439 - 0.085 13.0 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain DUF1462 PF07315.11 ORF83164 - 0.078 13.3 0.0 0.089 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1462) NOP19 PF10863.8 ORF83147 - 0.073 12.9 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Nucleolar protein 19 Bacillus_PapR PF05968.11 ORF82731 - 0.11 12.4 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Bacillus PapR protein OST-HTH PF12872.7 ORF824 - 0.078 12.8 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 OST-HTH/LOTUS domain PIP5K PF01504.18 ORF81584 - 1.2e-08 34.5 0.1 1.2e-08 34.5 0.1 1.0 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase GARS_C PF02843.16 ORF81156 - 0.1 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, C domain Peroxidase_ext PF11895.8 ORF80955 - 0.042 13.8 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 Fungal peroxidase extension region MBT PF02820.18 ORF80052 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat DUF948 PF06103.11 ORF79910 - 0.012 15.8 3.2 0.015 15.5 3.2 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF5052 PF16475.5 ORF79910 - 0.051 13.2 0.8 0.057 13.0 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5052) SSP160 PF06933.11 ORF79910 - 1.4 7.0 14.9 1.6 6.8 14.9 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Dicty_REP PF05086.12 ORF79910 - 1.5 6.7 5.8 1.5 6.7 5.8 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Pox_F17 PF04767.12 ORF79313 - 0.31 11.6 4.5 0.37 11.3 4.5 1.2 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein MbtH PF03621.13 ORF79039 - 0.026 13.9 0.8 0.035 13.5 0.8 1.2 1 0 0 1 1 1 0 MbtH-like protein MORN PF02493.20 ORF78781 - 1e-09 37.7 8.2 1.5e-06 27.8 1.0 2.4 2 0 0 2 2 2 2 MORN repeat DUF5461 PF17545.2 ORF78127 - 0.011 16.0 0.1 0.013 15.7 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5461) HTH_38 PF13936.6 ORF78127 - 0.032 14.0 0.3 0.047 13.5 0.3 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1757 PF08560.10 ORF78092 - 0.051 13.6 0.0 0.052 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1757) DUF3915 PF13054.6 ORF77587 - 0.11 12.5 1.2 0.13 12.2 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) IQ PF00612.27 ORF77550 - 3.8e-08 32.4 9.6 1.5e-06 27.5 2.0 2.8 3 0 0 3 3 3 2 IQ calmodulin-binding motif LEDGF PF11467.8 ORF7661 - 0.12 11.9 0.1 0.16 11.6 0.1 1.1 1 0 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) Nrap_D3 PF17404.2 ORF76609 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF76609 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R UL20 PF17582.2 ORF76525 - 0.14 11.4 2.6 0.15 11.3 2.6 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 XET_C PF06955.12 ORF7625 - 0.084 12.7 0.1 0.1 12.4 0.1 1.3 1 0 0 1 1 1 0 Xyloglucan endo-transglycosylase (XET) C-terminus DJ-1_PfpI PF01965.24 ORF76145 - 8.9e-09 35.4 0.0 1.1e-08 35.0 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family HCMV_UL139 PF12507.8 ORF76005 - 0.015 15.7 0.2 0.016 15.6 0.2 1.0 1 0 0 1 1 1 0 Human Cytomegalovirus UL139 protein CBM_14 PF01607.24 ORF75867 - 0.034 14.3 0.2 0.056 13.6 0.2 1.3 1 0 0 1 1 1 0 Chitin binding Peritrophin-A domain OST-HTH PF12872.7 ORF75853 - 0.078 12.8 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 OST-HTH/LOTUS domain Nrap_D3 PF17404.2 ORF75628 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF75628 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R SBDS_C PF09377.10 ORF75586 - 0.14 12.2 1.4 0.16 12.0 1.4 1.1 1 0 0 1 1 1 0 SBDS protein C-terminal domain zinc_ribbon_10 PF10058.9 ORF74507 - 0.018 14.8 2.0 0.025 14.3 2.0 1.3 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-Sec23_Sec24 PF04810.15 ORF74200 - 3.4 7.8 9.0 5.7 7.1 1.8 2.4 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger Sec20 PF03908.13 ORF73295 - 2.3e-05 24.2 0.8 2.6e-05 24.1 0.8 1.1 1 0 0 1 1 1 1 Sec20 HPIH PF13323.6 ORF73295 - 0.00066 19.6 0.1 0.0009 19.1 0.1 1.2 1 0 0 1 1 1 1 N-terminal domain with HPIH motif FLILHELTA PF10306.9 ORF73295 - 0.021 15.2 0.1 0.028 14.8 0.1 1.2 1 0 0 1 1 1 0 Hypothetical protein FLILHELTA ATPase_2 PF01637.18 ORF73295 - 0.033 14.1 0.5 0.036 14.0 0.5 1.0 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ABC2_membrane_3 PF12698.7 ORF73295 - 0.04 13.0 0.0 0.043 12.9 0.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF4200 PF13863.6 ORF73295 - 0.049 14.0 2.4 0.063 13.7 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) Ferlin_C PF16165.5 ORF73295 - 0.05 13.5 0.2 0.057 13.4 0.2 1.1 1 0 0 1 1 1 0 Ferlin C-terminus FeoB_associated PF12669.7 ORF73295 - 0.45 11.0 3.3 0.62 10.5 3.3 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Wax2_C PF12076.8 ORF72567 - 0.11 12.2 0.0 0.17 11.6 0.0 1.3 1 1 0 1 1 1 0 WAX2 C-terminal domain CAP-ZIP_m PF15255.6 ORF71441 - 0.026 14.8 0.2 0.027 14.7 0.2 1.2 1 0 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region DUF3091 PF11291.8 ORF69710 - 0.0046 17.1 0.2 0.0046 17.1 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3091) C6_DPF PF10170.9 ORF69637 - 0.048 14.0 0.8 0.048 14.0 0.8 1.4 1 1 0 1 1 1 0 Cysteine-rich domain 8TM_micro PF17028.5 ORF69444 - 0.12 12.1 4.9 0.12 12.1 4.9 1.0 1 0 0 1 1 1 0 8TM Microsporidial transmembrane domain RuvA_C PF07499.13 ORF68995 - 0.15 12.5 1.0 0.34 11.4 1.0 1.6 1 0 0 1 1 1 0 RuvA, C-terminal domain Rap1a PF18602.1 ORF68932 - 0.0051 17.1 0.0 0.0072 16.6 0.0 1.3 1 0 0 1 1 1 1 Rap1a immunity proteins RNA_pol_N PF01194.17 ORF68387 - 5e-29 100.4 1.2 5.8e-29 100.2 1.2 1.1 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.12 ORF68387 - 0.02 15.1 1.0 0.082 13.2 1.0 1.8 1 1 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) NIF PF03031.18 ORF68022 - 7e-15 55.1 0.2 8e-15 54.9 0.2 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF705 PF05152.12 ORF68022 - 0.0036 16.8 0.0 0.0041 16.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF705) Nrap_D3 PF17404.2 ORF6789 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF6789 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R SOBP PF15279.6 ORF67266 - 0.071 13.7 0.4 0.071 13.7 0.4 1.0 1 0 0 1 1 1 0 Sine oculis-binding protein Toxin_19 PF08088.12 ORF66780 - 0.095 12.8 5.8 0.28 11.3 3.4 2.1 2 0 0 2 2 2 0 Conotoxin I-superfamily LPAM_1 PF08139.12 ORF66582 - 0.0025 18.2 1.6 0.0025 18.2 1.6 2.3 2 0 0 2 2 2 1 Prokaryotic membrane lipoprotein lipid attachment site FlaE PF07559.14 ORF66582 - 0.11 13.0 0.0 0.13 12.9 0.0 1.0 1 0 0 1 1 1 0 Flagellar basal body protein FlaE p450 PF00067.22 ORF66097 - 0.0018 17.1 0.1 0.002 17.0 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 LST1 PF05083.13 ORF65834 - 0.0046 17.2 1.1 0.35 11.2 0.1 2.1 2 0 0 2 2 2 2 LST-1 protein SBDS_C PF09377.10 ORF65312 - 0.14 12.2 1.4 0.16 12.0 1.4 1.1 1 0 0 1 1 1 0 SBDS protein C-terminal domain eIF3g PF12353.8 ORF65247 - 0.0026 18.2 0.2 0.0026 18.2 0.2 1.8 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 3 subunit G DUF1761 PF08570.10 ORF64903 - 0.016 15.4 0.3 0.018 15.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1761) Desulfoferrod_N PF06397.12 ORF64862 - 0.0015 18.1 0.6 0.0038 16.8 0.6 1.6 1 0 0 1 1 1 1 Desulfoferrodoxin, N-terminal domain DUF4499 PF14934.6 ORF64862 - 0.042 14.2 4.9 0.044 14.1 4.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4499) CLAMP PF14769.6 ORF64862 - 0.047 14.2 1.2 0.055 13.9 1.2 1.1 1 0 0 1 1 1 0 Flagellar C1a complex subunit C1a-32 DUF4173 PF13777.6 ORF63557 - 0.086 12.3 4.3 0.095 12.1 4.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) TarH PF02203.15 ORF63557 - 0.34 10.8 0.3 0.42 10.5 0.3 1.2 1 0 0 1 1 1 0 Tar ligand binding domain homologue DUF3918 PF13056.6 ORF63233 - 0.19 11.3 0.1 0.19 11.3 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3918) pP_pnuc_1 PF18165.1 ORF63034 - 0.023 14.6 0.6 0.025 14.5 0.6 1.1 1 0 0 1 1 1 0 Predicted pPIWI-associating nuclease DUF1664 PF07889.12 ORF63034 - 0.1 12.6 4.3 0.12 12.4 4.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) cwf21 PF08312.12 ORF63034 - 0.12 12.5 3.4 0.22 11.7 3.4 1.5 1 1 0 1 1 1 0 cwf21 domain YabA PF06156.13 ORF63034 - 0.32 11.7 6.0 0.34 11.6 6.0 1.1 1 0 0 1 1 1 0 Initiation control protein YabA ISG65-75 PF11727.8 ORF63034 - 0.42 9.8 6.5 0.47 9.6 6.5 1.0 1 0 0 1 1 1 0 Invariant surface glycoprotein DUF3573 PF12097.8 ORF63034 - 0.47 9.2 2.2 0.49 9.2 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) YdjO PF14169.6 ORF63 - 0.029 14.1 0.3 0.06 13.1 0.3 1.5 2 0 0 2 2 2 0 Cold-inducible protein YdjO Spheroidin PF05541.12 ORF63 - 1.1 7.0 7.1 1.2 6.9 7.1 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein IncFII_repA PF02387.15 ORF6264 - 0.17 11.1 0.1 0.19 10.9 0.1 1.1 1 0 0 1 1 1 0 IncFII RepA protein family CheY-binding PF09078.11 ORF62433 - 0.77 9.9 3.8 9.5 6.4 2.3 2.2 2 0 0 2 2 2 0 CheY binding Tom5 PF10642.9 ORF62125 - 0.14 12.2 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial import receptor subunit or translocase Antimicrobial25 PF16839.5 ORF62115 - 0.23 11.6 6.9 0.29 11.2 6.9 1.2 1 0 0 1 1 1 0 Nematode antimicrobial peptide MBT PF02820.18 ORF61936 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat NIF PF03031.18 ORF61916 - 7e-15 55.1 0.2 8e-15 54.9 0.2 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF705 PF05152.12 ORF61916 - 0.0036 16.8 0.0 0.0041 16.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF705) Resolvase PF00239.21 ORF60418 - 0.026 14.6 0.1 0.026 14.6 0.1 1.2 1 0 0 1 1 1 0 Resolvase, N terminal domain U-box PF04564.15 ORF60201 - 0.00035 20.7 0.0 0.00042 20.4 0.0 1.1 1 0 0 1 1 1 1 U-box domain Nrap_D3 PF17404.2 ORF59769 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF59769 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R SVM_signal PF12113.8 ORF59536 - 0.19 11.7 0.5 0.19 11.7 0.5 2.4 2 0 0 2 2 2 0 SVM protein signal sequence Innexin PF00876.18 ORF59322 - 0.12 11.7 2.9 0.12 11.7 2.9 1.0 1 0 0 1 1 1 0 Innexin Hepar_II_III_N PF16889.5 ORF58556 - 0.19 10.9 0.0 0.22 10.8 0.0 1.0 1 0 0 1 1 1 0 Heparinase II/III N-terminus ATP_sub_h PF10775.9 ORF58556 - 0.2 11.7 0.1 0.25 11.4 0.1 1.1 1 0 0 1 1 1 0 ATP synthase complex subunit h DUF648 PF04890.13 ORF58394 - 0.26 11.0 2.5 0.3 10.8 2.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF648) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks371.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks371.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks371.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks371.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:36:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5320 PF17253.2 ORF57008 - 0.41 11.7 3.3 0.47 11.5 3.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5320) Nodulin PF02451.15 ORF56948 - 0.022 14.2 2.1 0.023 14.2 2.1 1.1 1 0 0 1 1 1 0 Nodulin Coiled PF05710.12 ORF56948 - 0.81 10.6 9.8 2.7 8.9 2.5 2.1 1 1 1 2 2 2 0 Coiled coil FNIP PF05725.12 ORF56667 - 0.055 13.6 0.1 0.083 13.1 0.1 1.3 1 0 0 1 1 1 0 FNIP Repeat DUF4212 PF13937.6 ORF56007 - 0.11 12.8 5.5 0.13 12.6 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4212) Cu_amine_oxid PF01179.20 ORF55096 - 2.6e-11 43.1 0.1 2.9e-11 42.9 0.1 1.1 1 0 0 1 1 1 1 Copper amine oxidase, enzyme domain Antimicrobial25 PF16839.5 ORF54134 - 0.23 11.6 6.9 0.29 11.2 6.9 1.2 1 0 0 1 1 1 0 Nematode antimicrobial peptide MOSC_N PF03476.16 ORF54031 - 4.8e-06 26.5 0.0 5.9e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain Innexin PF00876.18 ORF54011 - 0.12 11.7 2.9 0.12 11.7 2.9 1.0 1 0 0 1 1 1 0 Innexin zf_C2H2_6 PF18450.1 ORF53279 - 0.0096 15.6 3.2 0.0096 15.6 3.2 2.7 3 0 0 3 3 3 1 Zinc Finger domain Ribosomal_S10 PF00338.22 ORF53250 - 0.072 13.3 0.0 0.076 13.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S10p/S20e DUF3678 PF12435.8 ORF52712 - 0.0079 15.5 7.0 0.38 10.2 0.6 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF3678) zinc-ribbons_6 PF07191.12 ORF52702 - 0.002 18.1 3.0 0.0027 17.6 3.0 1.3 1 0 0 1 1 1 1 zinc-ribbons PsaM PF07465.13 ORF52651 - 0.0092 15.7 0.5 0.0092 15.7 0.5 1.8 2 0 0 2 2 2 1 Photosystem I protein M (PsaM) Neuroparsin PF07327.11 ORF52624 - 0.078 13.4 0.0 0.087 13.3 0.0 1.2 1 0 0 1 1 1 0 Neuroparsin Luciferase_N PF05295.11 ORF52510 - 0.063 13.3 0.1 0.077 13.0 0.1 1.1 1 0 0 1 1 1 0 Luciferase/LBP N-terminal domain Mdv1 PF11542.8 ORF52510 - 0.08 12.9 0.1 0.14 12.2 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial division protein 1 RepA1_leader PF08048.12 ORF52386 - 2.1 8.7 6.9 4.4e+02 1.3 6.9 2.5 1 1 0 1 1 1 0 Tap RepA1 leader peptide YhdB PF14148.6 ORF50964 - 0.0026 17.8 0.0 0.0038 17.3 0.0 1.3 1 0 0 1 1 1 1 YhdB-like protein zf_C2H2_6 PF18450.1 ORF50939 - 0.0096 15.6 3.2 0.0096 15.6 3.2 2.7 3 0 0 3 3 3 1 Zinc Finger domain SapB_2 PF03489.17 ORF50826 - 0.071 13.2 0.6 0.12 12.6 0.2 1.6 2 0 0 2 2 2 0 Saposin-like type B, region 2 DUF3918 PF13056.6 ORF4923 - 0.041 13.5 0.1 0.061 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) Cas_Csy1 PF09611.10 ORF48830 - 0.052 12.6 0.1 0.059 12.4 0.1 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) MATalpha_HMGbox PF04769.12 ORF48232 - 0.064 12.6 0.0 0.073 12.4 0.0 1.1 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box Med16 PF11635.8 ORF47980 - 0.28 9.1 0.8 0.26 9.1 0.8 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 BAMBI PF06211.12 ORF47382 - 0.12 12.6 0.0 0.14 12.4 0.0 1.0 1 0 0 1 1 1 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain SprA-related PF12118.8 ORF46971 - 1.8 7.7 3.5 1.8 7.6 3.5 1.0 1 0 0 1 1 1 0 SprA-related family DUF2105 PF09878.9 ORF46970 - 0.0099 15.6 2.4 0.011 15.4 2.4 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2105) DUF629 PF04780.12 ORF46936 - 1 7.8 9.6 1.2 7.6 9.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) Pox_LP_H2 PF03356.15 ORF46303 - 0.03 14.2 0.0 0.038 13.9 0.0 1.0 1 0 0 1 1 1 0 Viral late protein H2 DNA_primase_lrg PF04104.14 ORF45821 - 0.22 10.9 1.4 0.24 10.8 1.4 1.1 1 0 0 1 1 1 0 Eukaryotic and archaeal DNA primase, large subunit DM13 PF10517.9 ORF45758 - 0.1 13.2 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Electron transfer DM13 YIF1 PF03878.15 ORF44745 - 0.15 11.6 0.1 0.17 11.4 0.1 1.0 1 0 0 1 1 1 0 YIF1 CC2D2AN-C2 PF15625.6 ORF44117 - 0.15 11.8 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 CC2D2A N-terminal C2 domain zf_C2H2_6 PF18450.1 ORF43671 - 0.0096 15.6 3.2 0.0096 15.6 3.2 2.7 3 0 0 3 3 3 1 Zinc Finger domain DUF1590 PF07629.11 ORF43246 - 0.03 14.1 0.1 0.087 12.7 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1590) DUF3270 PF11674.8 ORF42914 - 0.092 12.9 2.1 0.13 12.5 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) N2227 PF07942.12 ORF403 - 0.17 11.0 0.1 0.25 10.5 0.1 1.3 1 1 0 1 1 1 0 N2227-like protein OGG_N PF07934.12 ORF39885 - 4.1e-08 33.3 0.0 4.4e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain DUF2769 PF10967.8 ORF39629 - 0.0049 17.5 4.2 0.011 16.4 4.1 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF2769) Nrap_D3 PF17404.2 ORF39533 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF39533 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R NOP19 PF10863.8 ORF38980 - 0.073 12.9 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Nucleolar protein 19 zf-MYND PF01753.18 ORF38536 - 0.057 13.5 3.3 0.14 12.3 3.3 1.7 1 1 0 1 1 1 0 MYND finger Ribosomal_L32p PF01783.23 ORF38536 - 0.36 11.1 8.2 0.31 11.3 6.4 1.8 1 1 1 2 2 2 0 Ribosomal L32p protein family F420_ligase PF01996.16 ORF38501 - 0.13 11.6 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 F420-0:Gamma-glutamyl ligase SCF PF02404.15 ORF37723 - 0.076 12.3 0.3 0.074 12.4 0.3 1.0 1 0 0 1 1 1 0 Stem cell factor DUF5642 PF18702.1 ORF3747 - 0.04 13.7 3.8 0.059 13.1 3.2 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF5642) IRS PF02174.17 ORF3664 - 0.059 13.2 0.1 0.069 13.0 0.1 1.1 1 0 0 1 1 1 0 PTB domain (IRS-1 type) zf_C2H2_6 PF18450.1 ORF36232 - 0.0096 15.6 3.2 0.0096 15.6 3.2 2.7 3 0 0 3 3 3 1 Zinc Finger domain MADF_DNA_bdg PF10545.9 ORF35263 - 1.7 9.0 7.0 0.42 11.0 2.8 1.8 1 1 1 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like 7TM_GPCR_Sra PF02117.16 ORF34797 - 0.028 13.3 0.4 0.03 13.2 0.4 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sra Prolamin_like PF05617.11 ORF33785 - 0.0017 18.5 0.1 0.002 18.3 0.1 1.2 1 0 0 1 1 1 1 Prolamin-like YbhQ PF11076.8 ORF33328 - 0.049 13.6 1.2 0.051 13.6 1.2 1.0 1 0 0 1 1 1 0 Putative inner membrane protein YbhQ DUF4301 PF14134.6 ORF33234 - 0.052 12.4 0.0 0.059 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) DUF3390 PF11870.8 ORF32614 - 0.092 13.1 0.1 0.1 13.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) SR-25 PF10500.9 ORF32349 - 0.16 11.6 8.1 0.16 11.6 8.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF1201 PF06716.11 ORF32232 - 0.063 13.3 4.3 0.063 13.3 4.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1201) TMCO5 PF14992.6 ORF32199 - 0.17 11.4 0.1 0.21 11.1 0.1 1.0 1 0 0 1 1 1 0 TMCO5 family BRX PF08381.11 ORF32019 - 0.015 14.6 0.0 0.02 14.3 0.0 1.2 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 Ceramidase PF05875.12 ORF31242 - 0.016 14.7 0.1 0.016 14.6 0.1 1.0 1 0 0 1 1 1 0 Ceramidase Tad PF13400.6 ORF31242 - 0.041 14.2 0.9 7.4 7.0 0.0 2.1 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like FixP_N PF14715.6 ORF31172 - 0.13 12.1 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Nrap_D3 PF17404.2 ORF31139 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF31139 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R Innexin PF00876.18 ORF31057 - 0.12 11.7 2.9 0.12 11.7 2.9 1.0 1 0 0 1 1 1 0 Innexin PAP2 PF01569.21 ORF30301 - 0.16 11.7 6.8 0.14 11.9 3.3 1.9 1 1 1 2 2 2 0 PAP2 superfamily UQ_con PF00179.26 ORF30264 - 3.4e-11 42.9 0.1 3.7e-11 42.8 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF30264 - 0.028 14.1 0.2 0.034 13.9 0.2 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family B DUF1899 PF08953.11 ORF29569 - 0.011 15.6 0.2 0.015 15.1 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1899) PRRSV_Env PF02340.15 ORF29419 - 0.0047 16.3 0.1 0.0053 16.2 0.1 1.1 1 0 0 1 1 1 1 PRRSV putative envelope protein PTN13_u3 PF16599.5 ORF28355 - 0.0002 21.5 1.7 0.00023 21.3 1.7 1.0 1 0 0 1 1 1 1 Unstructured linker region on PTN13 protein between PDZ DUF3704 PF12488.8 ORF2782 - 0.086 12.5 3.9 0.15 11.7 3.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3704) OST-HTH PF12872.7 ORF27783 - 0.078 12.8 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 OST-HTH/LOTUS domain Nrap_D3 PF17404.2 ORF2734 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF2734 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R YkuI_C PF10388.9 ORF27157 - 0.065 13.0 0.1 0.078 12.8 0.1 1.1 1 0 0 1 1 1 0 EAL-domain associated signalling protein domain DUF4210 PF13915.6 ORF2682 - 0.14 12.7 2.8 1.3 9.7 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4210) MORN PF02493.20 ORF26580 - 9.5e-16 56.7 16.4 2e-05 24.2 0.6 4.0 4 0 0 4 4 4 4 MORN repeat Phytochelatin_C PF09328.10 ORF26551 - 0.094 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) Phe_ZIP PF08916.11 ORF26509 - 0.053 14.2 4.1 0.39 11.5 0.2 2.0 1 1 1 2 2 2 0 Phenylalanine zipper DUF2970 PF11174.8 ORF26405 - 0.019 14.8 0.1 0.031 14.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2970) CLLAC PF15675.5 ORF26342 - 0.12 11.9 0.8 0.28 10.8 0.8 1.6 1 0 0 1 1 1 0 CLLAC-motif containing domain zf_C2H2_6 PF18450.1 ORF25910 - 0.0096 15.6 3.2 0.0096 15.6 3.2 2.7 3 0 0 3 3 3 1 Zinc Finger domain MYT1 PF08474.11 ORF25422 - 0.056 13.4 0.1 0.059 13.3 0.1 1.0 1 0 0 1 1 1 0 Myelin transcription factor 1 YdjO PF14169.6 ORF24881 - 0.029 14.1 0.3 0.06 13.1 0.3 1.5 2 0 0 2 2 2 0 Cold-inducible protein YdjO Spheroidin PF05541.12 ORF24881 - 1.1 7.0 7.1 1.2 6.9 7.1 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein LRR_4 PF12799.7 ORF24699 - 0.00018 21.8 4.3 0.00019 21.7 1.1 2.3 1 1 2 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF24699 - 0.074 12.8 2.0 0.12 12.2 1.9 1.5 1 1 0 1 1 1 0 Leucine rich repeat Atypical_Card PF18461.1 ORF2468 - 0.1 12.8 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Atypical caspase recruitment domain UvrD_C_2 PF13538.6 ORF24180 - 3.3e-15 55.6 0.2 5.4e-15 55.0 0.2 1.4 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 ORF24180 - 2.7e-06 27.3 0.2 3.2e-06 27.1 0.2 1.1 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase UvrD_C PF13361.6 ORF24180 - 0.00029 20.3 0.2 0.00043 19.8 0.2 1.3 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain PAS_9 PF13426.7 ORF24102 - 0.069 13.4 0.0 0.076 13.3 0.0 1.1 1 0 0 1 1 1 0 PAS domain N2227 PF07942.12 ORF23713 - 0.19 10.9 0.0 0.19 10.9 0.0 1.0 1 0 0 1 1 1 0 N2227-like protein DUF4917 PF16263.5 ORF22372 - 0.079 12.3 0.4 0.078 12.3 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4917) DUF1887 PF09002.11 ORF22115 - 0.017 13.8 0.0 0.02 13.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1887) HSM3_C PF18794.1 ORF21549 - 0.082 12.5 0.3 0.12 11.9 0.3 1.2 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain DUF3830 PF12903.7 ORF21401 - 0.056 13.1 0.0 0.06 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3830) YdjO PF14169.6 ORF21381 - 0.029 14.1 0.3 0.06 13.1 0.3 1.5 2 0 0 2 2 2 0 Cold-inducible protein YdjO Spheroidin PF05541.12 ORF21381 - 1.1 7.0 7.1 1.2 6.9 7.1 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein Porin_6 PF16939.5 ORF21201 - 0.096 11.8 2.6 0.099 11.7 2.6 1.0 1 0 0 1 1 1 0 Putative porin Nrap_D3 PF17404.2 ORF20439 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF20439 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R S1FA PF04689.13 ORF20404 - 0.72 10.0 3.7 0.58 10.3 2.6 1.4 1 1 0 1 1 1 0 DNA binding protein S1FA MarC PF01914.17 ORF20322 - 8.9e-21 74.2 3.7 9.5e-21 74.1 3.7 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein DND1_DSRM PF14709.7 ORF19081 - 0.08 13.2 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 double strand RNA binding domain from DEAD END PROTEIN 1 TPR_MLP1_2 PF07926.12 ORF18848 - 0.0024 18.0 3.6 0.0026 17.8 3.6 1.1 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein GARP PF16731.5 ORF18848 - 0.031 13.9 1.5 0.037 13.7 1.5 1.1 1 0 0 1 1 1 0 Glutamic acid/alanine-rich protein of Trypanosoma FAM86 PF14904.6 ORF18848 - 0.068 13.3 0.6 0.086 12.9 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function Prefoldin_2 PF01920.20 ORF18848 - 0.084 12.8 4.9 0.11 12.5 4.4 1.4 1 1 0 1 1 1 0 Prefoldin subunit DUF4094 PF13334.6 ORF18848 - 0.14 12.6 2.8 0.16 12.4 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) DUF773 PF05600.12 ORF18848 - 0.24 10.1 7.1 0.28 9.9 7.1 1.0 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 DUF4120 PF13496.6 ORF18557 - 0.077 13.4 0.0 0.15 12.5 0.0 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4120) DUF4173 PF13777.6 ORF18111 - 0.086 12.3 4.3 0.095 12.1 4.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) TarH PF02203.15 ORF18111 - 0.34 10.8 0.3 0.42 10.5 0.3 1.2 1 0 0 1 1 1 0 Tar ligand binding domain homologue Zmiz1_N PF18028.1 ORF17651 - 0.18 12.2 3.9 0.63 10.4 3.9 1.7 1 1 0 1 1 1 0 Zmiz1 N-terminal tetratricopeptide repeat domain Phage_holin_1 PF04531.13 ORF17586 - 0.17 12.5 0.8 0.2 12.2 0.8 1.3 1 0 0 1 1 1 0 Bacteriophage holin MYT1 PF08474.11 ORF17184 - 0.056 13.4 0.1 0.059 13.3 0.1 1.0 1 0 0 1 1 1 0 Myelin transcription factor 1 YdjO PF14169.6 ORF16337 - 0.029 14.1 0.3 0.06 13.1 0.3 1.5 2 0 0 2 2 2 0 Cold-inducible protein YdjO Spheroidin PF05541.12 ORF16337 - 1.1 7.0 7.1 1.2 6.9 7.1 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein DM13 PF10517.9 ORF15848 - 0.1 13.2 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Electron transfer DM13 LRR_6 PF13516.6 ORF152881 - 0.059 13.5 0.1 5.4 7.3 0.0 2.2 2 0 0 2 2 2 0 Leucine Rich repeat MBT PF02820.18 ORF152387 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat DUF1590 PF07629.11 ORF151337 - 0.03 14.1 0.1 0.087 12.7 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1590) DUF2946 PF11162.8 ORF151106 - 0.083 13.6 0.1 0.094 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) Ldh_2 PF02615.14 ORF151106 - 0.19 10.8 0.1 0.23 10.6 0.1 1.1 1 0 0 1 1 1 0 Malate/L-lactate dehydrogenase Antifungal_prot PF11402.8 ORF150870 - 0.055 13.7 0.0 0.086 13.1 0.0 1.3 1 0 0 1 1 1 0 Antifungal protein DUF4560 PF15118.6 ORF150810 - 0.0057 16.5 4.5 0.12 12.3 0.9 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4560) Innexin PF00876.18 ORF149570 - 0.12 11.7 2.9 0.12 11.7 2.9 1.0 1 0 0 1 1 1 0 Innexin HEM4 PF02602.15 ORF148815 - 2.6e-07 30.2 0.0 3.1e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Fer4_23 PF18009.1 ORF148348 - 0.075 13.5 0.0 0.081 13.4 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S iron-sulfur cluster binding domain NdhL PF10716.9 ORF148317 - 0.018 15.0 1.6 0.03 14.3 1.6 1.4 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit PL48 PF15903.5 ORF147753 - 0.039 12.9 0.4 0.044 12.8 0.4 1.0 1 0 0 1 1 1 0 Filopodia upregulated, FAM65 ApoO PF09769.9 ORF147593 - 0.12 12.4 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Apolipoprotein O Arteri_env PF01606.16 ORF147411 - 0.53 10.1 8.1 0.55 10.1 8.1 1.0 1 0 0 1 1 1 0 Arterivirus envelope protein MBT PF02820.18 ORF147389 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat TAF1D PF15333.6 ORF146532 - 0.0084 15.9 0.0 0.0089 15.8 0.0 1.0 1 0 0 1 1 1 1 TATA box-binding protein-associated factor 1D NRDE-2 PF08424.10 ORF146532 - 0.014 14.5 0.1 0.015 14.5 0.1 1.0 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference DNA_RNApol_7kD PF03604.13 ORF146009 - 0.057 13.1 1.4 0.095 12.4 0.1 2.0 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit NAD_binding_3 PF03447.16 ORF14448 - 0.17 12.6 0.0 0.18 12.5 0.0 1.0 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Dicty_REP PF05086.12 ORF14374 - 0.0063 14.6 2.0 0.0065 14.5 2.0 1.0 1 0 0 1 1 1 1 Dictyostelium (Slime Mold) REP protein DDR PF08841.10 ORF143226 - 0.1 11.6 0.0 0.1 11.6 0.0 1.0 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain HSM3_C PF18794.1 ORF142304 - 0.082 12.5 0.3 0.12 11.9 0.3 1.2 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain BCHF PF07284.11 ORF142262 - 0.38 10.8 4.9 0.79 9.7 4.9 1.5 1 1 0 1 1 1 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) Nrap_D3 PF17404.2 ORF142167 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF142167 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R DUF2946 PF11162.8 ORF141711 - 0.056 14.1 2.2 0.063 13.9 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) DUF2678 PF10856.8 ORF141603 - 0.0069 16.3 0.3 0.0089 16.0 0.3 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2678) Curto_V2 PF07325.11 ORF141603 - 0.52 10.2 2.1 1 9.2 0.3 1.9 1 1 1 2 2 2 0 Curtovirus V2 protein PsbN PF02468.15 ORF141603 - 1 9.3 3.6 8.4 6.3 1.8 2.6 2 1 0 2 2 2 0 Photosystem II reaction centre N protein (psbN) Fe-ADH PF00465.19 ORF141414 - 0.062 12.1 1.0 0.067 12.0 1.0 1.0 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase Innexin PF00876.18 ORF140641 - 0.12 11.7 2.9 0.12 11.7 2.9 1.0 1 0 0 1 1 1 0 Innexin BDV_G PF06208.11 ORF140256 - 0.036 13.2 0.2 0.038 13.2 0.2 1.0 1 0 0 1 1 1 0 Borna disease virus G protein DUF4711 PF15829.5 ORF139704 - 0.0035 17.3 1.6 0.0043 17.0 1.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4711) DUF3520 PF12034.8 ORF139704 - 0.1 12.7 0.2 0.1 12.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3520) Nudix_N_2 PF14803.6 ORF139209 - 0.045 13.7 0.1 0.069 13.1 0.1 1.3 1 0 0 1 1 1 0 Nudix N-terminal PUNUT PF16913.5 ORF138978 - 0.0032 16.7 2.9 0.0037 16.5 2.9 1.0 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport Bac_export_2 PF01312.19 ORF138978 - 1.3 8.2 4.6 1.3 8.1 4.6 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family Sde2_N_Ubi PF13019.6 ORF138775 - 0.26 11.1 0.0 0.27 11.0 0.0 1.0 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain SF3A3 PF16837.5 ORF137884 - 0.026 15.0 0.4 0.031 14.8 0.4 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 Phage_tail_APC PF16778.5 ORF137884 - 0.18 11.7 0.1 0.21 11.5 0.1 1.4 1 1 0 1 1 1 0 Phage tail assembly chaperone protein Aminotran_MocR PF12897.7 ORF136960 - 0.095 11.5 0.0 0.11 11.3 0.0 1.0 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase DUF5554 PF17709.1 ORF136521 - 0.16 12.1 5.7 0.2 11.8 5.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5554) FERM_F1 PF18379.1 ORF136235 - 0.071 13.1 0.0 0.081 13.0 0.0 1.1 1 0 0 1 1 1 0 FERM F1 ubiquitin-like domain SPX PF03105.19 ORF135960 - 0.0024 17.9 0.1 0.0029 17.6 0.1 1.1 1 0 0 1 1 1 1 SPX domain Myb_DNA-binding PF00249.31 ORF135889 - 0.085 13.1 0.7 0.48 10.7 0.7 2.0 1 1 0 1 1 1 0 Myb-like DNA-binding domain UTP25 PF06862.12 ORF135831 - 0.0048 15.7 0.1 0.005 15.7 0.1 1.0 1 0 0 1 1 1 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 DUF1211 PF06736.11 ORF135831 - 0.044 14.2 0.2 0.087 13.3 0.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1211) zf-XS PF03470.14 ORF135683 - 0.039 14.2 0.0 0.058 13.7 0.0 1.3 1 0 0 1 1 1 0 XS zinc finger domain TMEM51 PF15345.6 ORF135683 - 0.2 11.5 0.6 0.21 11.4 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 RPS31 PF17067.5 ORF135500 - 0.0057 16.8 0.4 0.0078 16.4 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S31e gag_pre-integrs PF13976.6 ORF135487 - 0.0018 18.1 0.2 0.0023 17.8 0.2 1.1 1 0 0 1 1 1 1 GAG-pre-integrase domain DUF5409 PF17421.2 ORF135379 - 0.036 14.8 0.5 0.039 14.7 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Orexin PF02072.15 ORF134917 - 0.032 14.2 0.1 0.034 14.1 0.1 1.1 1 0 0 1 1 1 0 Prepro-orexin FAM72 PF14976.6 ORF133944 - 0.0045 17.1 0.1 0.0047 17.1 0.1 1.0 1 0 0 1 1 1 1 FAM72 protein UPF0547 PF10571.9 ORF132359 - 0.022 14.8 0.7 0.05 13.7 0.7 1.6 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 DUF5491 PF17595.2 ORF132323 - 0.074 13.4 0.0 0.099 13.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5491) Tenui_NCP PF04876.12 ORF132095 - 0.031 13.8 0.0 0.031 13.8 0.0 1.0 1 0 0 1 1 1 0 Tenuivirus major non-capsid protein DUF3685 PF12452.8 ORF131699 - 0.13 11.9 3.4 0.14 11.8 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) LMBR1 PF04791.16 ORF131699 - 0.27 10.1 1.9 0.3 10.0 1.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Vitelline_membr PF10542.9 ORF1316 - 0.063 13.2 5.0 2.9 7.8 1.1 2.2 2 0 0 2 2 2 0 Vitelline membrane cysteine-rich region Nrap_D3 PF17404.2 ORF131343 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF131343 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R HMA PF00403.26 ORF130743 - 9.5e-06 26.0 0.0 1.2e-05 25.6 0.0 1.2 1 0 0 1 1 1 1 Heavy-metal-associated domain Nrap_D3 PF17404.2 ORF130380 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF130380 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R Toxin_28 PF08115.11 ORF129946 - 0.034 14.0 1.3 0.066 13.1 1.3 1.5 1 0 0 1 1 1 0 SFI toxin family TAF1_subA PF14929.6 ORF129817 - 0.03 13.7 0.0 0.034 13.6 0.0 1.0 1 0 0 1 1 1 0 TAF RNA Polymerase I subunit A DUF5554 PF17709.1 ORF129752 - 0.16 12.1 5.7 0.2 11.8 5.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5554) PriA_CRR PF18319.1 ORF128952 - 0.033 14.2 1.9 0.033 14.2 1.9 1.9 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain MBT PF02820.18 ORF128679 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat DUF5391 PF17369.2 ORF127980 - 0.026 14.6 0.2 0.046 13.8 0.1 1.4 1 1 1 2 2 2 0 Family of unknown function (DUF5391) TNFR_16_TM PF18422.1 ORF127980 - 0.14 12.1 1.3 0.14 12.1 1.3 2.2 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain Myco_arth_vir_N PF09610.10 ORF127631 - 0.62 10.2 3.6 0.27 11.4 1.3 1.6 2 0 0 2 2 2 0 Mycoplasma virulence signal region (Myco_arth_vir_N) DUF5554 PF17709.1 ORF127170 - 0.16 12.1 5.7 0.2 11.8 5.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5554) BRX PF08381.11 ORF126826 - 0.015 14.6 0.0 0.02 14.3 0.0 1.2 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 Metal_resist PF13801.6 ORF126723 - 0.23 11.6 0.6 0.36 11.0 0.6 1.3 1 0 0 1 1 1 0 Heavy-metal resistance Spatacsin_C PF14649.6 ORF126124 - 0.083 12.0 0.0 0.09 11.9 0.0 1.1 1 0 0 1 1 1 0 Spatacsin C-terminus Fijivirus_P9-2 PF06837.11 ORF12583 - 3.3 7.1 8.9 3.3 7.1 8.4 1.3 1 1 0 1 1 1 0 Fijivirus P9-2 protein Nrap_D3 PF17404.2 ORF124706 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF124706 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R MBT PF02820.18 ORF124574 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat DUF648 PF04890.13 ORF124497 - 0.26 11.0 2.5 0.3 10.8 2.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF648) LRR_4 PF12799.7 ORF124015 - 0.00018 21.8 4.3 0.00019 21.7 1.1 2.3 1 1 2 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF124015 - 0.074 12.8 2.0 0.12 12.2 1.9 1.5 1 1 0 1 1 1 0 Leucine rich repeat GerE PF00196.19 ORF123638 - 1.1e-25 88.9 0.9 1.2e-25 88.8 0.9 1.0 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 ORF123638 - 3e-08 33.2 0.1 4.5e-08 32.6 0.1 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 ORF123638 - 1.1e-06 28.1 0.5 1.4e-06 27.7 0.5 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 ORF123638 - 3.3e-06 26.7 0.0 4.5e-06 26.3 0.0 1.3 1 1 0 1 1 1 1 Homeodomain-like domain Sigma70_r4 PF04545.16 ORF123638 - 3.8e-06 26.3 0.7 1.2e-05 24.7 0.7 1.8 1 1 0 1 1 1 1 Sigma-70, region 4 HTH_20 PF12840.7 ORF123638 - 0.00013 22.0 0.1 0.00016 21.6 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_10 PF04967.12 ORF123638 - 0.00067 19.4 0.7 0.0061 16.3 0.1 2.0 1 1 1 2 2 2 1 HTH DNA binding domain HTH_11 PF08279.12 ORF123638 - 0.0012 18.7 0.7 0.002 18.1 0.7 1.4 1 1 0 1 1 1 1 HTH domain HTH_28 PF13518.6 ORF123638 - 0.0021 18.2 0.0 0.003 17.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Phage_terminase PF10668.9 ORF123638 - 0.0023 17.9 0.0 0.0036 17.3 0.0 1.3 1 0 0 1 1 1 1 Phage terminase small subunit HTH_38 PF13936.6 ORF123638 - 0.0031 17.3 0.0 0.0054 16.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 ORF123638 - 0.0038 17.2 0.0 0.0054 16.7 0.0 1.4 1 1 0 1 1 1 1 Winged helix-turn helix SAM_DrpA PF18255.1 ORF123638 - 0.0074 16.5 0.1 0.01 16.1 0.1 1.2 1 0 0 1 1 1 1 DNA processing protein A sterile alpha motif domain MarR PF01047.22 ORF123638 - 0.0096 15.8 0.3 0.014 15.3 0.3 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 ORF123638 - 0.013 15.4 0.4 0.016 15.0 0.4 1.2 1 0 0 1 1 1 0 MarR family Trans_reg_C PF00486.28 ORF123638 - 0.015 15.3 1.3 0.11 12.6 1.3 2.0 1 1 0 1 1 1 0 Transcriptional regulatory protein, C terminal HTH_Crp_2 PF13545.6 ORF123638 - 0.019 15.0 0.4 0.14 12.2 0.1 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain RP-C PF03428.13 ORF123638 - 0.033 13.9 0.2 0.048 13.3 0.2 1.4 1 1 0 1 1 1 0 Replication protein C N-terminal domain HTH_40 PF14493.6 ORF123638 - 0.034 14.6 0.1 0.041 14.3 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_ECF PF07638.11 ORF123638 - 0.034 14.0 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 ECF sigma factor HTH_7 PF02796.15 ORF123638 - 0.042 13.9 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase TnsD PF15978.5 ORF123638 - 0.048 12.6 0.1 0.053 12.5 0.1 1.0 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_AsnC-type PF13404.6 ORF123638 - 0.049 13.5 0.0 0.1 12.4 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_12 PF08461.10 ORF123638 - 0.056 13.4 0.1 0.074 13.0 0.1 1.3 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_36 PF13730.6 ORF123638 - 0.075 13.0 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_3 PF01381.22 ORF123638 - 0.076 13.1 0.7 0.1 12.7 0.1 1.5 2 0 0 2 2 1 0 Helix-turn-helix TrpP PF17099.5 ORF122834 - 0.0069 16.2 1.0 0.0072 16.1 1.0 1.0 1 0 0 1 1 1 1 Tryptophan transporter TrpP Antimicrobial25 PF16839.5 ORF122524 - 0.23 11.6 6.9 0.29 11.2 6.9 1.2 1 0 0 1 1 1 0 Nematode antimicrobial peptide Cytochrome_B PF00033.19 ORF121761 - 0.0038 17.1 0.5 0.0039 17.0 0.5 1.0 1 0 0 1 1 1 1 Cytochrome b/b6/petB Nrap_D3 PF17404.2 ORF121289 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF121289 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R N2227 PF07942.12 ORF120677 - 0.0089 15.2 0.8 0.011 15.0 0.8 1.0 1 0 0 1 1 1 1 N2227-like protein Tom5 PF10642.9 ORF120324 - 0.14 12.2 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial import receptor subunit or translocase PsbL PF02419.17 ORF120280 - 0.021 14.8 0.2 0.045 13.7 0.2 1.5 1 0 0 1 1 1 0 PsbL protein Fanconi_A PF03511.14 ORF120280 - 0.024 14.5 0.3 0.033 14.1 0.3 1.3 1 0 0 1 1 1 0 Fanconi anaemia group A protein Ephrin_rec_like PF07699.13 ORF120213 - 0.012 15.3 1.4 0.022 14.5 0.3 1.9 2 0 0 2 2 2 0 Putative ephrin-receptor like ApoO PF09769.9 ORF11935 - 0.12 12.4 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Apolipoprotein O PQ-loop PF04193.14 ORF118957 - 0.044 13.6 0.1 0.069 12.9 0.1 1.2 1 0 0 1 1 1 0 PQ loop repeat DUF648 PF04890.13 ORF118943 - 0.26 11.0 2.5 0.3 10.8 2.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF648) Epiglycanin_C PF14654.6 ORF118583 - 1.5 8.9 6.6 0.12 12.5 1.8 1.6 1 1 1 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region Mito_morph_reg PF14972.6 ORF118063 - 0.025 14.2 0.3 0.031 13.9 0.3 1.1 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator ARTD15_N PF18084.1 ORF117575 - 0.059 13.6 1.2 0.1 12.8 0.1 1.7 1 1 0 2 2 2 0 ARTD15 N-terminal domain HAP1_N PF04849.13 ORF117126 - 0.0047 16.2 2.8 0.0055 16.0 2.8 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region SlyX PF04102.12 ORF117126 - 0.031 14.9 2.0 0.046 14.4 2.0 1.3 1 1 0 1 1 1 0 SlyX TMEM192 PF14802.6 ORF117126 - 0.12 11.5 0.2 0.16 11.0 0.2 1.2 1 0 0 1 1 1 0 TMEM192 family INCENP_ARK-bind PF03941.15 ORF117126 - 1.7 8.6 6.7 9.8 6.2 0.1 2.2 2 0 0 2 2 2 0 Inner centromere protein, ARK binding region IncFII_repA PF02387.15 ORF116725 - 0.17 11.1 0.1 0.19 10.9 0.1 1.1 1 0 0 1 1 1 0 IncFII RepA protein family RRM_7 PF16367.5 ORF11630 - 0.17 12.1 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif TT_ORF2 PF02957.15 ORF116163 - 0.14 13.1 1.3 0.16 12.9 1.3 1.1 1 0 0 1 1 1 0 TT viral ORF2 Spem1 PF15670.5 ORF116121 - 0.28 10.8 0.3 0.33 10.5 0.3 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 YdjO PF14169.6 ORF115046 - 0.029 14.1 0.3 0.06 13.1 0.3 1.5 2 0 0 2 2 2 0 Cold-inducible protein YdjO Spheroidin PF05541.12 ORF115046 - 1.1 7.0 7.1 1.2 6.9 7.1 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein Nrap_D3 PF17404.2 ORF114892 - 0.025 14.7 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 Nrap protein domain 3 CENP-R PF06729.12 ORF114892 - 0.03 14.2 0.2 0.035 14.0 0.2 1.1 1 0 0 1 1 1 0 Kinetochore component, CENP-R NMDAR2_C PF10565.9 ORF11469 - 0.015 14.3 2.4 0.015 14.2 2.4 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus Tat PF00539.18 ORF114504 - 9.5 6.5 7.8 1.7 8.8 3.9 1.7 1 1 1 2 2 2 0 Transactivating regulatory protein (Tat) MBT PF02820.18 ORF114475 - 0.085 13.2 0.3 0.11 12.8 0.3 1.1 1 0 0 1 1 1 0 mbt repeat DUF645 PF04875.12 ORF114404 - 0.027 14.5 0.0 0.036 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF645 SprA-related PF12118.8 ORF114305 - 1.8 7.7 3.5 1.8 7.6 3.5 1.0 1 0 0 1 1 1 0 SprA-related family DUF2105 PF09878.9 ORF114304 - 0.0099 15.6 2.4 0.011 15.4 2.4 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2105) zf-XS PF03470.14 ORF114064 - 0.039 14.2 0.0 0.058 13.7 0.0 1.3 1 0 0 1 1 1 0 XS zinc finger domain TMEM51 PF15345.6 ORF114064 - 0.2 11.5 0.6 0.21 11.4 0.6 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 Med16 PF11635.8 ORF113704 - 0.28 9.1 0.8 0.26 9.1 0.8 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 UPF0300 PF08594.10 ORF113683 - 0.026 13.8 0.0 0.026 13.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) AbrB PF05145.12 ORF11242 - 2.8e-22 79.1 4.9 3e-22 79.0 4.9 1.0 1 0 0 1 1 1 1 Transition state regulatory protein AbrB PriA_CRR PF18319.1 ORF112342 - 0.033 14.2 1.9 0.033 14.2 1.9 1.9 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain DUF1891 PF09004.10 ORF11183 - 0.14 11.8 0.2 0.14 11.8 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1891) Viral_DNA_bi PF02236.17 ORF1116 - 0.096 12.9 0.1 0.14 12.4 0.0 1.4 1 1 0 1 1 1 0 Viral DNA-binding protein, all alpha domain DB_JBP1 PF18526.1 ORF111361 - 0.0028 17.6 0.0 0.0031 17.5 0.0 1.1 1 0 0 1 1 1 1 Thymine dioxygenase JBP1 DNA-binding domain Metal_resist PF13801.6 ORF111268 - 0.24 11.6 0.6 0.36 11.0 0.6 1.3 1 0 0 1 1 1 0 Heavy-metal resistance FoP_duplication PF13865.6 ORF110153 - 0.007 16.9 0.4 0.013 16.0 0.4 1.5 1 0 0 1 1 1 1 C-terminal duplication domain of Friend of PRMT1 AMP-binding_C PF13193.6 ORF109821 - 0.01 16.8 0.4 0.014 16.3 0.4 1.2 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain DIM PF08194.12 ORF109821 - 0.054 13.7 0.0 0.093 12.9 0.0 1.5 1 0 0 1 1 1 0 DIM protein Ephrin_rec_like PF07699.13 ORF109682 - 0.012 15.3 1.4 0.022 14.5 0.3 1.9 2 0 0 2 2 2 0 Putative ephrin-receptor like LysR_substrate PF03466.20 ORF109352 - 0.0093 15.3 0.0 0.01 15.2 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain UPF0300 PF08594.10 ORF109005 - 0.026 13.8 0.0 0.026 13.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) NS3_envE PF02723.14 ORF10849 - 0.018 15.1 0.3 0.022 14.8 0.3 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E DUF3915 PF13054.6 ORF108483 - 0.11 12.5 1.2 0.13 12.2 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) zf-SAP30 PF13866.6 ORF10805 - 0.17 12.1 4.3 0.95 9.6 0.9 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger OST-HTH PF12872.7 ORF107804 - 0.078 12.8 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 OST-HTH/LOTUS domain BppU_N PF10651.9 ORF107582 - 0.0023 17.7 0.3 0.0023 17.6 0.3 1.1 1 0 0 1 1 1 1 BppU N-terminal domain Herpes_U59 PF04529.12 ORF107279 - 0.039 13.0 1.6 0.042 12.9 1.6 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein LAT PF15234.6 ORF107279 - 0.28 10.9 1.6 0.33 10.7 1.6 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells DUF4212 PF13937.6 ORF107139 - 0.11 12.8 5.5 0.13 12.6 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4212) RLI PF04068.15 ORF106729 - 0.042 13.7 0.4 0.059 13.2 0.4 1.2 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI zf-SAP30 PF13866.6 ORF10595 - 0.17 12.1 4.3 0.95 9.6 0.9 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger Thioredoxin_6 PF13848.6 ORF105676 - 0.011 15.6 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin PF00085.20 ORF105675 - 4.5e-05 23.4 0.0 6e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin ERp29_N PF07912.13 ORF105675 - 0.011 15.8 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 0 ERp29, N-terminal domain Thioredoxin_6 PF13848.6 ORF105675 - 0.029 14.3 0.0 0.033 14.1 0.0 1.0 1 0 0 1 1 1 0 Thioredoxin-like domain YdjO PF14169.6 ORF105184 - 0.029 14.1 0.3 0.06 13.1 0.3 1.5 2 0 0 2 2 2 0 Cold-inducible protein YdjO Spheroidin PF05541.12 ORF105184 - 1.1 7.0 7.1 1.2 6.9 7.1 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein zinc_ribbon_13 PF09855.9 ORF104990 - 0.18 12.0 4.4 0.96 9.7 4.4 2.0 1 1 0 1 1 1 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) DM13 PF10517.9 ORF104435 - 0.1 13.2 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Electron transfer DM13 BDV_G PF06208.11 ORF104301 - 0.036 13.2 0.2 0.038 13.2 0.2 1.0 1 0 0 1 1 1 0 Borna disease virus G protein Fijivirus_P9-2 PF06837.11 ORF104216 - 1.8 8.0 10.6 1.9 7.9 10.6 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein DUF3915 PF13054.6 ORF103727 - 0.11 12.5 1.2 0.13 12.2 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF3915 PF13054.6 ORF103720 - 0.11 12.5 1.2 0.13 12.2 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF1180 PF06679.12 ORF103180 - 2.1 8.8 3.4 2.2 8.7 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) zf-SAP30 PF13866.6 ORF102810 - 0.17 12.1 4.3 0.95 9.6 0.9 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger LRR_4 PF12799.7 ORF102705 - 0.00018 21.8 4.3 0.00019 21.7 1.1 2.3 1 1 2 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF102705 - 0.074 12.8 2.0 0.12 12.2 1.9 1.5 1 1 0 1 1 1 0 Leucine rich repeat DUF3256 PF11644.8 ORF102371 - 0.046 13.2 0.2 0.05 13.1 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3256) Carb_kinase PF01256.17 ORF101827 - 0.0021 17.5 0.0 0.0021 17.5 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate kinase Phos_pyr_kin PF08543.12 ORF101827 - 0.099 12.0 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Ribosomal_S26e PF01283.19 ORF101687 - 0.042 14.3 0.3 0.042 14.3 0.3 1.1 1 0 0 1 1 1 0 Ribosomal protein S26e Herpes_U59 PF04529.12 ORF10142 - 0.039 13.0 1.6 0.042 12.9 1.6 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein LAT PF15234.6 ORF10142 - 0.28 10.9 1.6 0.33 10.7 1.6 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells DUF3343 PF11823.8 NODE_73778_length_214_cov_0.888268_g65837_i0reverse_frame_1 - 0.038 13.5 0.0 0.056 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3343) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks372.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks372.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks372.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks372.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SMC_N PF02463.19 NODE_73770_length_214_cov_0.893855_g65829_i0forward_frame_1 - 0.0079 15.7 0.1 0.0085 15.6 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_13 PF13166.6 NODE_73770_length_214_cov_0.893855_g65829_i0forward_frame_1 - 0.038 12.6 0.0 0.038 12.6 0.0 1.0 1 0 0 1 1 1 0 AAA domain UCH PF00443.29 NODE_73768_length_214_cov_0.893855_g65827_i0reverse_frame_1 - 0.01 15.3 0.2 0.01 15.3 0.2 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase zf-like PF04071.12 NODE_73757_length_214_cov_0.988827_g65816_i0forward_frame_1 - 0.17 11.8 5.2 0.18 11.7 5.2 1.1 1 0 0 1 1 1 0 Cysteine-rich small domain DUF3987 PF13148.6 NODE_73744_length_214_cov_1.033520_g65803_i0forward_frame_1 - 0.019 14.0 0.0 0.022 13.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Microvir_lysis PF04517.12 NODE_73743_length_214_cov_1.039106_g65802_i0forward_frame_1 - 0.04 13.9 0.4 0.11 12.4 0.1 1.8 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus AAA_lid_5 PF17865.1 NODE_73735_length_214_cov_1.111732_g65794_i0reverse_frame_1 - 0.16 12.1 1.0 0.28 11.3 1.0 1.5 1 1 0 1 1 1 0 Midasin AAA lid domain Fam20C PF06702.12 NODE_73734_length_214_cov_1.117318_g65793_i0forward_frame_1 - 0.44 10.3 3.4 0.54 10.1 3.4 1.1 1 0 0 1 1 1 0 Golgi casein kinase, C-terminal, Fam20 Toxin_2 PF00451.19 NODE_73733_length_214_cov_1.117318_g65792_i0forward_frame_1 - 0.011 16.0 0.8 0.019 15.2 0.8 1.4 1 0 0 1 1 1 0 Scorpion short toxin, BmKK2 Zn_ribbon_SprT PF17283.2 NODE_73727_length_214_cov_1.223464_g65786_i0reverse_frame_1 - 0.067 13.1 3.7 0.11 12.4 3.7 1.4 1 0 0 1 1 1 0 SprT-like zinc ribbon domain DUF4215 PF13948.6 NODE_73721_length_214_cov_1.268156_g65780_i0reverse_frame_1 - 2.3e-12 47.2 23.0 5.2e-08 33.2 11.5 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4215) ZZ PF00569.17 NODE_73721_length_214_cov_1.268156_g65780_i0reverse_frame_1 - 0.9 9.4 11.1 0.064 13.1 2.9 2.4 1 1 0 2 2 2 0 Zinc finger, ZZ type Alpha_E2_glycop PF00943.19 NODE_73719_length_214_cov_1.284916_g65778_i0forward_frame_1 - 0.17 10.6 0.1 0.19 10.4 0.1 1.0 1 0 0 1 1 1 0 Alphavirus E2 glycoprotein DUF5090 PF17009.5 NODE_73718_length_214_cov_1.284916_g65777_i0forward_frame_1 - 0.018 15.0 0.5 0.021 14.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF3481 PF11980.8 NODE_73718_length_214_cov_1.284916_g65777_i0forward_frame_1 - 0.94 9.2 3.3 10 5.9 0.1 2.1 1 1 1 2 2 2 0 C-terminal domain of neuropilin glycoprotein SH PF01445.17 NODE_73716_length_214_cov_1.290503_g65775_i0forward_frame_1 - 0.7 9.9 9.4 3.9 7.5 2.5 2.2 1 1 0 2 2 2 0 Viral small hydrophobic protein Atrophin-1 PF03154.15 NODE_73715_length_214_cov_1.296089_g65774_i0reverse_frame_1 - 0.059 11.7 6.8 0.06 11.6 6.8 1.0 1 0 0 1 1 1 0 Atrophin-1 family Pex14_N PF04695.13 NODE_73708_length_214_cov_1.335196_g65767_i0reverse_frame_1 - 3.4 8.3 15.8 4.2 8.0 15.8 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF3613 PF12266.8 NODE_73708_length_214_cov_1.335196_g65767_i0reverse_frame_1 - 3.7 7.4 15.0 1.6 8.5 8.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3613) KCNQ2_u3 PF16642.5 NODE_73708_length_214_cov_1.335196_g65767_i0reverse_frame_1 - 9.5 7.3 11.7 12 6.9 11.7 1.2 1 0 0 1 1 1 0 Unstructured region on Potassium channel subunit alpha KvLQT2 DNA_pol_A_exoN PF18305.1 NODE_73707_length_214_cov_1.335196_g65766_i0forward_frame_1 - 0.14 12.4 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 3' to 5' exonuclease C-terminal domain Gamma-thionin PF00304.20 NODE_73703_length_214_cov_1.340782_g65762_i0forward_frame_1 - 0.041 14.1 8.4 0.31 11.3 3.9 2.5 2 1 0 2 2 2 0 Gamma-thionin family DUF1652 PF07865.11 NODE_73702_length_214_cov_1.340782_g65761_i0forward_frame_1 - 0.15 11.9 0.1 0.23 11.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) Transposase_20 PF02371.16 NODE_73694_length_214_cov_1.351955_g65753_i0reverse_frame_1 - 0.16 12.3 0.0 0.2 12.0 0.0 1.1 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family DUF2353 PF09789.9 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.0015 18.0 0.4 0.0015 18.0 0.4 1.0 1 0 0 1 1 1 1 Uncharacterized coiled-coil protein (DUF2353) FliD_N PF02465.18 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.0091 16.7 1.1 0.0098 16.6 1.1 1.1 1 0 0 1 1 1 1 Flagellar hook-associated protein 2 N-terminus Bap31_Bap29_C PF18035.1 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.014 15.4 2.0 0.015 15.2 2.0 1.1 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain Alpha-2-MRAP_C PF06401.11 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.017 15.1 1.1 0.018 15.0 1.1 1.1 1 0 0 1 1 1 0 Alpha-2-macroglobulin RAP, C-terminal domain PI3K_P85_iSH2 PF16454.5 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.019 14.6 4.8 0.022 14.3 4.8 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF3584 PF12128.8 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.034 11.7 0.2 0.034 11.7 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) GrpE PF01025.19 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_1 - 0.036 13.7 0.6 0.036 13.7 0.6 1.1 1 0 0 1 1 1 0 GrpE Pex14_N PF04695.13 NODE_73684_length_214_cov_1.452514_g65743_i0reverse_frame_1 - 0.38 11.4 5.8 0.43 11.2 5.8 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region SPW PF03779.14 NODE_73684_length_214_cov_1.452514_g65743_i0forward_frame_1 - 0.0031 17.1 0.1 0.0049 16.4 0.1 1.2 1 0 0 1 1 1 1 SPW repeat Bunya_G2 PF03563.13 NODE_73683_length_214_cov_1.452514_g65742_i0reverse_frame_1 - 0.19 10.9 5.0 0.2 10.9 5.0 1.1 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 Il2rg PF15874.5 NODE_73683_length_214_cov_1.452514_g65742_i0reverse_frame_1 - 0.33 11.2 1.8 1.2 9.4 0.2 2.0 1 1 0 2 2 2 0 Putative Interleukin 2 receptor, gamma chain STAR_dimer PF16544.5 NODE_73683_length_214_cov_1.452514_g65742_i0forward_frame_1 - 0.12 12.0 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 Homodimerisation region of STAR domain protein SPT_ssu-like PF11779.8 NODE_73680_length_214_cov_1.469274_g65739_i0reverse_frame_1 - 0.11 12.2 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like Cytochrome_C7 PF14522.6 NODE_73654_length_214_cov_1.636872_g65713_i0forward_frame_1 - 0.018 15.0 0.4 0.035 14.1 0.4 1.5 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c Cytochrom_C PF00034.21 NODE_73654_length_214_cov_1.636872_g65713_i0forward_frame_1 - 0.064 14.4 0.8 0.075 14.2 0.8 1.2 1 0 0 1 1 1 0 Cytochrome c Cytochrome_CBB3 PF13442.6 NODE_73654_length_214_cov_1.636872_g65713_i0forward_frame_1 - 2.3 8.6 7.5 3.2 8.2 7.5 1.4 1 1 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III DUF5560 PF17715.1 NODE_73649_length_214_cov_1.709497_g65708_i0reverse_frame_1 - 0.1 12.1 3.8 0.11 12.0 3.8 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5560) DUF2282 PF10048.9 NODE_73648_length_214_cov_1.709497_g65707_i0reverse_frame_1 - 0.062 13.3 4.1 1.3 9.1 0.0 2.2 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2282) DUF4883 PF16224.5 NODE_73647_length_214_cov_1.720670_g65706_i0reverse_frame_1 - 0.017 15.4 2.3 0.018 15.3 2.3 1.0 1 0 0 1 1 1 0 DOmain of unknown function (DUF4883) TMEM234 PF10639.9 NODE_73646_length_214_cov_1.720670_g65705_i0reverse_frame_1 - 0.044 13.8 1.0 0.047 13.7 1.0 1.0 1 0 0 1 1 1 0 Putative transmembrane family 234 UPF0542 PF15086.6 NODE_73642_length_214_cov_1.759777_g65701_i0forward_frame_1 - 5.4 7.0 7.3 0.57 10.2 2.6 1.8 1 1 1 2 2 2 0 Uncharacterised protein family UPF0542 Hfx_Cass5 PF18287.1 NODE_73641_length_214_cov_1.776536_g65700_i0reverse_frame_1 - 0.095 12.9 0.1 0.12 12.6 0.1 1.3 1 0 0 1 1 1 0 Integron Cassette Protein Hfx_Cass5 DUF3270 PF11674.8 NODE_73629_length_214_cov_1.865922_g65688_i0forward_frame_1 - 0.041 14.1 0.7 0.051 13.8 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF3974 PF13120.6 NODE_73626_length_214_cov_1.899441_g65685_i0forward_frame_1 - 0.13 12.3 0.2 0.15 12.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) DUF3384 PF11864.8 NODE_73613_length_214_cov_2.111732_g65672_i0forward_frame_1 - 4.9 5.9 5.6 67 2.2 5.6 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3384) DUF1748 PF08520.10 NODE_73611_length_214_cov_2.134078_g65670_i0forward_frame_1 - 0.073 13.0 0.6 2.8 7.9 0.0 2.1 1 1 1 2 2 2 0 Fungal protein of unknown function (DUF1748) ORF6C PF10552.9 NODE_73603_length_214_cov_2.273743_g65662_i0forward_frame_1 - 0.054 13.6 0.2 0.061 13.4 0.2 1.2 1 0 0 1 1 1 0 ORF6C domain DUF308 PF03729.13 NODE_73596_length_214_cov_2.446927_g65655_i0forward_frame_1 - 0.00016 22.0 2.0 0.00023 21.4 2.0 1.3 1 1 0 1 1 1 1 Short repeat of unknown function (DUF308) Peptidase_S31 PF05578.12 NODE_73596_length_214_cov_2.446927_g65655_i0forward_frame_1 - 0.015 14.8 0.0 0.017 14.6 0.0 1.0 1 0 0 1 1 1 0 Pestivirus NS3 polyprotein peptidase S31 Acyl_transf_3 PF01757.22 NODE_73596_length_214_cov_2.446927_g65655_i0forward_frame_1 - 0.074 12.1 4.3 0.08 12.0 4.3 1.0 1 0 0 1 1 1 0 Acyltransferase family Sugar_tr PF00083.24 NODE_73594_length_214_cov_2.519553_g65653_i0reverse_frame_1 - 0.0045 15.9 0.0 0.0045 15.9 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF4179 PF13786.6 NODE_73594_length_214_cov_2.519553_g65653_i0reverse_frame_1 - 0.017 15.6 0.0 0.023 15.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) SCFA_trans PF02667.14 NODE_73590_length_214_cov_2.625698_g65649_i0forward_frame_1 - 0.04 12.9 0.2 0.044 12.8 0.2 1.0 1 0 0 1 1 1 0 Short chain fatty acid transporter DUF1385 PF07136.11 NODE_73589_length_214_cov_2.636872_g65648_i0forward_frame_1 - 0.066 12.5 1.0 0.072 12.4 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) UPF0259 PF06790.11 NODE_73588_length_214_cov_2.636872_g65647_i0forward_frame_1 - 3.7e-29 102.2 9.8 4e-29 102.1 9.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0259) zf-C2H2 PF00096.26 NODE_73583_length_214_cov_2.826816_g65642_i0reverse_frame_1 - 3.3 8.4 7.3 21 5.8 2.0 2.9 3 0 0 3 3 3 0 Zinc finger, C2H2 type Trefoil PF00088.18 NODE_73579_length_214_cov_3.022346_g65638_i0reverse_frame_1 - 0.16 11.9 4.8 2.8 7.9 0.2 2.4 2 1 0 2 2 2 0 Trefoil (P-type) domain C1_1 PF00130.22 NODE_73576_length_214_cov_3.189944_g65635_i0forward_frame_1 - 0.17 11.8 6.0 0.26 11.2 6.0 1.5 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) KASH PF10541.9 NODE_73564_length_214_cov_4.067039_g65623_i0reverse_frame_1 - 0.24 11.7 2.9 0.24 11.7 2.1 1.3 1 1 0 1 1 1 0 Nuclear envelope localisation domain Fer4_3 PF12798.7 NODE_73562_length_214_cov_5.916201_g65621_i0forward_frame_1 - 0.09 13.8 2.3 0.09 13.8 2.3 3.4 3 1 0 3 3 3 0 4Fe-4S binding domain PG_isomerase_N PF18353.1 NODE_73559_length_214_cov_15.497207_g65618_i0reverse_frame_1 - 0.11 12.9 0.0 0.13 12.7 0.0 1.3 1 1 0 1 1 1 0 Phosphoglucose isomerase N-terminal domain PGM1_C PF18105.1 NODE_73557_length_214_cov_21.709497_g65616_i0reverse_frame_1 - 0.11 12.1 0.2 0.15 11.6 0.2 1.2 1 0 0 1 1 1 0 PGM1 C-terminal domain zf-LITAF-like PF10601.9 NODE_73554_length_214_cov_30.642458_g65613_i0reverse_frame_1 - 0.076 13.3 2.7 0.096 13.0 2.7 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain DIRP PF06584.13 NODE_73549_length_214_cov_36.430168_g65608_i0forward_frame_1 - 0.036 14.3 1.0 0.042 14.0 1.0 1.0 1 0 0 1 1 1 0 DIRP Myb_DNA-bind_3 PF12776.7 NODE_73546_length_214_cov_42.648045_g65605_i0reverse_frame_1 - 0.14 13.1 0.0 0.17 12.9 0.0 1.1 1 0 0 1 1 1 0 Myb/SANT-like DNA-binding domain CD52 PF15116.6 NODE_73545_length_214_cov_44.368715_g65604_i0forward_frame_1 - 0.88 9.7 6.7 1.9 8.6 6.7 1.6 1 0 0 1 1 1 0 CAMPATH-1 antigen C1_2 PF03107.16 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.0055 17.0 6.1 0.0055 17.0 6.1 1.5 1 1 1 2 2 2 1 C1 domain zf-B_box PF00643.24 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.022 14.9 8.4 0.088 13.0 8.4 1.9 1 1 0 1 1 1 0 B-box zinc finger zinc-ribbons_6 PF07191.12 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.1 12.6 5.3 0.4 10.7 5.4 2.1 1 1 0 1 1 1 0 zinc-ribbons HscB_4_cys PF18256.1 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.22 11.3 3.8 0.77 9.6 0.5 2.9 3 1 0 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif YhfH PF14149.6 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.29 11.2 7.7 2 8.5 1.5 2.9 3 1 0 3 3 3 0 YhfH-like protein zf-RING_7 PF02591.15 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 0.85 9.9 0.0 0.85 9.9 0.0 2.6 2 1 0 2 2 2 0 C4-type zinc ribbon domain RNA_POL_M_15KD PF02150.16 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 1.5 8.8 8.1 18 5.3 0.3 3.0 1 1 2 3 3 3 0 RNA polymerases M/15 Kd subunit TF_Zn_Ribbon PF08271.12 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 1.5 8.4 10.6 0.46 10.0 0.6 2.8 1 1 2 3 3 3 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 1.8 8.8 10.8 7.9 6.7 0.3 3.3 1 1 1 2 2 2 0 Zinc ribbon domain zf-C4_Topoisom PF01396.19 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 3.8 7.4 9.1 4 7.3 0.3 2.8 3 1 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.6 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 3.9 7.0 13.9 3 7.4 0.2 3.7 3 1 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 NODE_73544_length_214_cov_45.050279_g65603_i0forward_frame_1 - 4.4 7.1 10.3 4.2 7.2 0.1 3.5 4 0 0 4 4 4 0 zinc-ribbon domain DUF1133 PF06576.11 NODE_73539_length_214_cov_47.569832_g65598_i0reverse_frame_1 - 0.1 12.0 0.4 0.56 9.6 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1133) DiS_P_DiS PF06750.13 NODE_73523_length_214_cov_66.631285_g65582_i0forward_frame_1 - 0.0044 17.1 1.9 0.0053 16.8 1.9 1.1 1 0 0 1 1 1 1 Bacterial Peptidase A24 N-terminal domain Jiraiya PF15038.6 NODE_73522_length_214_cov_66.692737_g65581_i0forward_frame_1 - 0.045 13.2 0.8 0.17 11.3 0.6 1.8 1 1 1 2 2 2 0 Jiraiya SOP4 PF17081.5 NODE_73520_length_214_cov_72.754190_g65579_i0reverse_frame_1 - 0.17 11.4 0.0 0.18 11.3 0.0 1.0 1 0 0 1 1 1 0 Suppressor of PMA 1-7 protein Apocytochr_F_C PF01333.19 NODE_73519_length_214_cov_73.776536_g65578_i0reverse_frame_1 - 0.099 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Apocytochrome F, C-terminal PSCyt1 PF07635.11 NODE_73506_length_214_cov_171.189944_g65565_i0reverse_frame_1 - 0.098 13.3 0.1 0.12 12.9 0.1 1.2 1 0 0 1 1 1 0 Planctomycete cytochrome C LPD30 PF18850.1 NODE_73502_length_214_cov_251.625698_g65561_i0reverse_frame_1 - 0.13 12.0 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein associated domain 30 Peptidase_M41 PF01434.18 NODE_73493_length_215_cov_0.861111_g65552_i0forward_frame_1 - 2.8e-09 37.1 0.0 2.8e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M41 VEG PF06257.11 NODE_73485_length_215_cov_0.883333_g65544_i0forward_frame_1 - 0.043 13.8 0.0 0.074 13.1 0.0 1.3 1 0 0 1 1 1 0 Biofilm formation stimulator VEG DUF5081 PF16887.5 NODE_73484_length_215_cov_0.883333_g65543_i0reverse_frame_1 - 0.017 14.2 0.0 0.018 14.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5081) DUF4881 PF16222.5 NODE_73484_length_215_cov_0.883333_g65543_i0reverse_frame_1 - 0.076 12.8 0.0 0.086 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4881) VDE PF07137.11 NODE_73477_length_215_cov_0.888889_g65536_i0reverse_frame_1 - 0.047 13.2 2.6 0.057 12.9 2.6 1.0 1 0 0 1 1 1 0 VDE lipocalin domain DUF87 PF01935.17 NODE_73473_length_215_cov_0.888889_g65532_i0reverse_frame_1 - 0.014 15.5 0.2 0.014 15.5 0.2 1.0 1 0 0 1 1 1 0 Helicase HerA, central domain Oxidored-like PF09791.9 NODE_73466_length_215_cov_1.000000_g65525_i0reverse_frame_1 - 0.11 12.2 0.2 0.21 11.3 0.2 1.4 1 0 0 1 1 1 0 Oxidoreductase-like protein, N-terminal CYTL1 PF15153.6 NODE_73458_length_215_cov_1.055556_g65517_i0reverse_frame_1 - 0.015 15.3 0.2 0.016 15.1 0.2 1.0 1 0 0 1 1 1 0 Cytokine-like protein 1 CAF1-p150_N PF15557.6 NODE_73454_length_215_cov_1.072222_g65513_i0reverse_frame_1 - 0.015 15.3 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 CAF1 complex subunit p150, region binding to PCNA MFS_1 PF07690.16 NODE_73453_length_215_cov_1.077778_g65512_i0reverse_frame_1 - 6.4e-05 22.0 0.7 6.8e-05 21.9 0.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_73453_length_215_cov_1.077778_g65512_i0reverse_frame_1 - 0.0015 17.5 0.3 0.0016 17.4 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter BT1 PF03092.16 NODE_73453_length_215_cov_1.077778_g65512_i0reverse_frame_1 - 0.018 13.3 0.4 0.019 13.2 0.4 1.0 1 0 0 1 1 1 0 BT1 family DUF4468 PF14730.6 NODE_73442_length_215_cov_1.127778_g65501_i0reverse_frame_1 - 0.055 13.8 0.0 0.063 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold Glycoprotein_G PF00802.19 NODE_73440_length_215_cov_1.138889_g65499_i0forward_frame_1 - 0.071 12.5 0.0 0.085 12.2 0.0 1.0 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G DUF3551 PF12071.8 NODE_73437_length_215_cov_1.188889_g65496_i0forward_frame_1 - 0.017 15.2 3.5 0.023 14.7 3.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3551) Peptidase_C2 PF00648.21 NODE_73432_length_215_cov_1.222222_g65491_i0reverse_frame_1 - 2e-06 27.1 0.0 2e-06 27.0 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Bunya_G2 PF03563.13 NODE_73430_length_215_cov_1.233333_g65489_i0reverse_frame_1 - 0.022 14.0 1.7 0.024 13.9 1.7 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 MPM1 PF17234.2 NODE_73429_length_215_cov_1.250000_g65488_i0reverse_frame_1 - 0.012 15.9 1.5 0.013 15.8 1.5 1.1 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 Sacchrp_dh_NADP PF03435.18 NODE_73427_length_215_cov_1.288889_g65486_i0reverse_frame_1 - 1.1e-06 29.0 0.0 1.1e-06 28.9 0.0 1.0 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DUF1414 PF07208.11 NODE_73423_length_215_cov_1.311111_g65482_i0reverse_frame_1 - 0.14 12.1 0.1 0.2 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1414) Megourin PF17560.2 NODE_73419_length_215_cov_1.322222_g65478_i0reverse_frame_1 - 0.03 14.6 0.5 0.05 13.8 0.5 1.4 1 0 0 1 1 1 0 Aphid Megourins CD47 PF04549.14 NODE_73418_length_215_cov_1.327778_g65477_i0reverse_frame_1 - 0.24 11.6 9.2 0.27 11.4 9.2 1.1 1 0 0 1 1 1 0 CD47 transmembrane region LRRNT PF01462.18 NODE_73417_length_215_cov_1.327778_g65476_i0forward_frame_1 - 0.026 14.1 0.2 0.065 12.9 0.0 1.7 2 0 0 2 2 2 0 Leucine rich repeat N-terminal domain Ufd2P_core PF10408.9 NODE_73412_length_215_cov_1.333333_g65471_i0forward_frame_1 - 2.5e-06 26.4 0.2 2.6e-06 26.4 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin elongating factor core D_CNTX PF17492.2 NODE_73405_length_215_cov_1.394444_g65464_i0forward_frame_1 - 0.0052 16.9 0.6 0.0052 16.9 0.6 1.6 2 0 0 2 2 2 1 Delta Ctenitoxins DNA_primase_S PF01896.19 NODE_73401_length_215_cov_1.416667_g65460_i0forward_frame_1 - 0.15 12.1 0.0 0.16 12.0 0.0 1.0 1 0 0 1 1 1 0 DNA primase small subunit SpoVS PF04232.12 NODE_73399_length_215_cov_1.433333_g65458_i0reverse_frame_1 - 0.00016 21.3 0.0 0.00021 21.0 0.0 1.1 1 0 0 1 1 1 1 Stage V sporulation protein S (SpoVS) oligo_HPY PF08352.12 NODE_73384_length_215_cov_1.505556_g65443_i0reverse_frame_1 - 0.023 15.2 0.0 0.032 14.8 0.0 1.1 1 0 0 1 1 1 0 Oligopeptide/dipeptide transporter, C-terminal region DUF2644 PF10841.8 NODE_73383_length_215_cov_1.511111_g65442_i0reverse_frame_1 - 0.13 12.5 1.2 12 6.2 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2644) ATP1G1_PLM_MAT8 PF02038.16 NODE_73381_length_215_cov_1.527778_g65440_i0reverse_frame_1 - 0.36 10.3 1.3 0.56 9.7 1.3 1.3 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family DUF5505 PF17610.2 NODE_73377_length_215_cov_1.555556_g65436_i0reverse_frame_1 - 0.067 13.2 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5505) Sugar_tr PF00083.24 NODE_73369_length_215_cov_1.616667_g65428_i0reverse_frame_1 - 2.2e-07 30.1 0.2 2.5e-07 29.9 0.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_73369_length_215_cov_1.616667_g65428_i0reverse_frame_1 - 0.0014 17.6 0.1 0.0014 17.6 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Pico_P2B PF01552.17 NODE_73368_length_215_cov_1.622222_g65427_i0reverse_frame_1 - 0.022 14.9 1.9 0.026 14.7 1.9 1.1 1 0 0 1 1 1 0 Picornavirus 2B protein DUF1475 PF07343.11 NODE_73364_length_215_cov_1.638889_g65423_i0reverse_frame_1 - 0.029 14.2 0.1 0.03 14.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1475) Sod_Ni PF09055.11 NODE_73360_length_215_cov_1.666667_g65419_i0forward_frame_1 - 0.0069 16.9 0.2 0.0077 16.8 0.2 1.2 1 0 0 1 1 1 1 Nickel-containing superoxide dismutase Antimicrobial13 PF08108.11 NODE_73354_length_215_cov_1.705556_g65413_i0forward_frame_1 - 0.96 9.6 2.7 29 5.0 0.1 3.2 3 0 0 3 3 3 0 Halocidin family DUF5033 PF16436.5 NODE_73343_length_215_cov_1.766667_g65402_i0reverse_frame_1 - 0.057 13.4 0.0 0.066 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5033) B56 PF01603.20 NODE_73338_length_215_cov_1.783333_g65397_i0reverse_frame_1 - 5e-26 91.6 0.6 5.2e-26 91.6 0.6 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) Fibrillin_U_N PF18193.1 NODE_73337_length_215_cov_1.827778_g65396_i0forward_frame_1 - 0.21 11.8 1.9 0.37 10.9 1.9 1.4 1 0 0 1 1 1 0 Fibrillin 1 unique N-terminal domain CSM2 PF16834.5 NODE_73334_length_215_cov_1.844444_g65393_i0reverse_frame_1 - 0.036 13.7 0.3 0.043 13.5 0.3 1.1 1 0 0 1 1 1 0 Shu complex component Csm2, DNA-binding DUF4791 PF16039.5 NODE_73330_length_215_cov_1.927778_g65389_i0forward_frame_1 - 0.0042 16.6 0.7 0.0045 16.5 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4791) Chlor_dismutase PF06778.12 NODE_73308_length_215_cov_2.211111_g65367_i0forward_frame_1 - 0.0089 15.6 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 Chlorite dismutase BTB PF00651.31 NODE_73306_length_215_cov_2.216667_g65365_i0forward_frame_1 - 5.7e-09 36.2 0.2 6.3e-09 36.0 0.2 1.0 1 0 0 1 1 1 1 BTB/POZ domain DUF2650 PF10853.8 NODE_73304_length_215_cov_2.233333_g65363_i0forward_frame_1 - 0.49 10.1 4.5 0.82 9.4 4.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) Ycf66_N PF07444.11 NODE_73301_length_215_cov_2.294444_g65360_i0reverse_frame_1 - 0.091 12.9 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Ycf66 protein N-terminus DUF4054 PF13262.6 NODE_73295_length_215_cov_2.444444_g65354_i0forward_frame_1 - 0.087 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4054) zf-C2H2_11 PF16622.5 NODE_73295_length_215_cov_2.444444_g65354_i0forward_frame_1 - 0.19 11.5 3.4 0.49 10.2 3.4 1.7 1 0 0 1 1 1 0 zinc-finger C2H2-type PAN_2 PF08276.11 NODE_73291_length_215_cov_2.477778_g65350_i0reverse_frame_1 - 0.0051 16.9 0.4 0.0064 16.6 0.4 1.2 1 0 0 1 1 1 1 PAN-like domain MFS_1 PF07690.16 NODE_73289_length_215_cov_2.511111_g65348_i0forward_frame_1 - 3.7e-05 22.8 0.2 3.7e-05 22.8 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Mad3_BUB1_I_2 PF17014.5 NODE_73289_length_215_cov_2.511111_g65348_i0forward_frame_1 - 0.024 14.8 0.0 0.03 14.4 0.0 1.1 1 0 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein DUF2618 PF10940.8 NODE_73280_length_215_cov_2.938889_g65339_i0forward_frame_1 - 0.15 11.9 1.2 1.5 8.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) Herpes_glycoH_C PF17488.2 NODE_73278_length_215_cov_3.005556_g65337_i0reverse_frame_1 - 0.012 15.4 0.4 0.7 9.7 0.0 2.0 2 0 0 2 2 2 0 Herpesvirus glycoprotein H C-terminal domain zf-CCHC_3 PF13917.6 NODE_73278_length_215_cov_3.005556_g65337_i0forward_frame_1 - 0.7 9.9 10.3 2.8 8.0 0.0 3.2 3 0 0 3 3 3 0 Zinc knuckle DUF3719 PF12516.8 NODE_73271_length_215_cov_3.855556_g65330_i0reverse_frame_1 - 0.11 12.2 0.8 0.14 11.9 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) Inhibitor_I29 PF08246.12 NODE_73266_length_215_cov_4.305556_g65325_i0forward_frame_1 - 5.2e-17 62.0 2.5 6.1e-17 61.8 2.5 1.0 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Glu_dehyd_C PF16912.5 NODE_73266_length_215_cov_4.305556_g65325_i0forward_frame_1 - 0.086 12.3 0.0 0.087 12.3 0.0 1.0 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus Flavi_NS5 PF00972.20 NODE_73265_length_215_cov_4.305556_g65324_i0forward_frame_1 - 0.11 10.6 0.1 0.11 10.6 0.1 1.0 1 0 0 1 1 1 0 Flavivirus RNA-directed RNA polymerase Omega-toxin PF06357.11 NODE_73254_length_215_cov_26.777778_g65313_i0reverse_frame_1 - 0.45 10.3 5.9 0.94 9.3 0.5 2.9 3 0 0 3 3 3 0 Omega-atracotoxin HpcH_HpaI PF03328.14 NODE_73250_length_215_cov_31.344444_g65309_i0reverse_frame_1 - 2.4e-05 23.6 0.0 2.9e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family DXP_reductoisom PF02670.16 NODE_73250_length_215_cov_31.344444_g65309_i0reverse_frame_1 - 0.041 14.6 0.0 0.044 14.5 0.0 1.0 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase DHC_N1 PF08385.12 NODE_73247_length_215_cov_38.205556_g65306_i0reverse_frame_1 - 0.02 13.6 0.1 0.023 13.4 0.1 1.0 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 1 PI_PP_C PF18365.1 NODE_73247_length_215_cov_38.205556_g65306_i0reverse_frame_1 - 0.087 12.8 0.2 0.11 12.5 0.2 1.4 1 1 0 1 1 1 0 Phosphoinositide phosphatase C-terminal domain DUF2477 PF10631.9 NODE_73243_length_215_cov_42.944444_g65302_i0reverse_frame_1 - 0.14 12.8 0.0 0.16 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2477) ETRAMP PF09716.10 NODE_73241_length_215_cov_43.516667_g65300_i0forward_frame_1 - 0.059 13.4 1.4 0.068 13.2 1.4 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Colicin_V PF02674.16 NODE_73239_length_215_cov_44.733333_g65298_i0forward_frame_1 - 0.032 14.2 0.3 0.041 13.8 0.3 1.1 1 0 0 1 1 1 0 Colicin V production protein Rad60-SLD PF11976.8 NODE_73237_length_215_cov_46.466667_g65296_i0reverse_frame_1 - 9.7e-09 34.9 0.1 1.4e-08 34.4 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 NODE_73237_length_215_cov_46.466667_g65296_i0reverse_frame_1 - 0.00061 19.5 0.0 0.00083 19.1 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family SRPRB PF09439.10 NODE_73230_length_215_cov_49.844444_g65289_i0reverse_frame_1 - 0.00028 20.4 0.4 0.00032 20.2 0.4 1.0 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit 7tm_3 PF00003.22 NODE_73227_length_215_cov_52.294444_g65286_i0reverse_frame_1 - 0.069 12.9 1.5 0.069 12.9 1.5 1.0 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR DUF347 PF03988.12 NODE_73225_length_215_cov_54.511111_g65284_i0forward_frame_1 - 0.015 15.5 0.2 0.023 14.9 0.2 1.2 1 0 0 1 1 1 0 Repeat of Unknown Function (DUF347) DUF2733 PF10813.8 NODE_73225_length_215_cov_54.511111_g65284_i0forward_frame_1 - 0.22 11.3 1.1 0.35 10.7 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2733) DUF5527 PF17665.1 NODE_73222_length_215_cov_55.822222_g65281_i0forward_frame_1 - 0.11 12.1 0.5 0.13 11.8 0.5 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5527) CoaE PF01121.20 NODE_73217_length_215_cov_59.016667_g65276_i0reverse_frame_1 - 0.0012 18.6 0.1 0.0015 18.2 0.1 1.2 1 0 0 1 1 1 1 Dephospho-CoA kinase TcdA_TcdB PF12919.7 NODE_73217_length_215_cov_59.016667_g65276_i0reverse_frame_1 - 0.007 15.7 0.2 0.0082 15.5 0.2 1.0 1 0 0 1 1 1 1 TcdA/TcdB catalytic glycosyltransferase domain Vert_HS_TF PF06546.11 NODE_73217_length_215_cov_59.016667_g65276_i0reverse_frame_1 - 0.054 13.1 0.2 0.06 13.0 0.2 1.0 1 0 0 1 1 1 0 Vertebrate heat shock transcription factor DUF354 PF04007.12 NODE_73216_length_215_cov_60.855556_g65275_i0reverse_frame_1 - 0.068 12.2 0.2 0.075 12.1 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF354) DUF601 PF04642.12 NODE_73201_length_215_cov_75.572222_g65260_i0forward_frame_1 - 0.0018 17.9 0.7 0.002 17.7 0.7 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF601 EntA_Immun PF08951.10 NODE_73201_length_215_cov_75.572222_g65260_i0forward_frame_1 - 0.0054 17.1 0.7 0.0071 16.7 0.7 1.3 1 1 0 1 1 1 1 Enterocin A Immunity DUF4298 PF14131.6 NODE_73201_length_215_cov_75.572222_g65260_i0forward_frame_1 - 0.051 13.5 0.7 0.17 11.8 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) HIRAN PF08797.11 NODE_73199_length_215_cov_78.650000_g65258_i0forward_frame_1 - 0.17 11.8 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 HIRAN domain v110 PF01639.17 NODE_73198_length_215_cov_84.966667_g65257_i0reverse_frame_1 - 0.066 13.1 1.1 0.072 13.0 1.1 1.1 1 0 0 1 1 1 0 Viral family 110 zf-RING_10 PF16685.5 NODE_73195_length_215_cov_99.816667_g65254_i0forward_frame_1 - 0.023 14.8 1.6 0.042 14.0 1.6 1.5 1 0 0 1 1 1 0 zinc RING finger of MSL2 Spp-24 PF07448.11 NODE_73190_length_215_cov_134.388889_g65249_i0forward_frame_1 - 0.48 10.6 4.3 0.68 10.2 4.3 1.2 1 0 0 1 1 1 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain Alba PF01918.21 NODE_73177_length_215_cov_316.611111_g65236_i0forward_frame_1 - 0.033 14.0 0.1 0.052 13.4 0.1 1.2 1 0 0 1 1 1 0 Alba Asp PF00026.23 NODE_73175_length_215_cov_795.000000_g65234_i0forward_frame_1 - 3.3e-09 36.6 0.1 3.4e-09 36.5 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease UL97 PF06734.12 NODE_73175_length_215_cov_795.000000_g65234_i0forward_frame_1 - 0.11 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 UL97 CD225 PF04505.12 NODE_73174_length_215_cov_809.933333_g65233_i0reverse_frame_1 - 0.12 12.5 0.4 0.12 12.5 0.4 1.5 2 0 0 2 2 2 0 Interferon-induced transmembrane protein AbfS_sensor PF18225.1 NODE_73174_length_215_cov_809.933333_g65233_i0forward_frame_1 - 0.054 13.4 0.0 0.072 13.0 0.0 1.2 1 0 0 1 1 1 0 Sensor histidine kinase (AbfS) sensor domain S-AdoMet_synt_C PF02773.16 NODE_73172_length_215_cov_13840.916667_g65231_i0forward_frame_1 - 6.4e-19 68.3 0.0 6.8e-19 68.2 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain PRA-CH PF01502.18 NODE_73172_length_215_cov_13840.916667_g65231_i0forward_frame_1 - 0.15 11.9 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-AMP cyclohydrolase Sigma70_r1_1 PF03979.14 NODE_73172_length_215_cov_13840.916667_g65231_i0forward_frame_1 - 0.18 11.9 0.0 0.23 11.5 0.0 1.1 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 Ycf1 PF05758.12 NODE_73169_length_216_cov_0.740331_g65228_i0reverse_frame_1 - 1.2 7.0 8.7 1.3 6.8 8.7 1.0 1 0 0 1 1 1 0 Ycf1 PMT PF02366.18 NODE_73166_length_216_cov_0.872928_g65225_i0reverse_frame_1 - 0.11 12.0 3.4 0.11 12.0 3.4 1.1 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Bunya_NS-S PF01104.17 NODE_73160_length_216_cov_0.883978_g65219_i0reverse_frame_1 - 0.062 13.1 0.1 0.073 12.9 0.1 1.2 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-s OrfB_Zn_ribbon PF07282.11 NODE_73160_length_216_cov_0.883978_g65219_i0forward_frame_1 - 0.048 13.6 0.2 0.078 12.9 0.2 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Dimer_Tnp_Tn5 PF02281.16 NODE_73158_length_216_cov_0.883978_g65217_i0forward_frame_1 - 0.13 11.9 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Transposase Tn5 dimerisation domain Hydrolase PF00702.26 NODE_73151_length_216_cov_0.950276_g65210_i0forward_frame_1 - 0.056 13.7 0.0 0.07 13.4 0.0 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase RhodobacterPufX PF11511.8 NODE_73148_length_216_cov_0.988950_g65207_i0reverse_frame_1 - 0.0072 15.9 2.2 0.0075 15.9 1.6 1.3 1 1 0 1 1 1 1 Intrinsic membrane protein PufX Serine_protease PF18405.1 NODE_73148_length_216_cov_0.988950_g65207_i0reverse_frame_1 - 0.13 11.4 0.4 0.14 11.3 0.4 1.0 1 0 0 1 1 1 0 Gammaproteobacterial serine protease Med25_VWA PF11265.8 NODE_73148_length_216_cov_0.988950_g65207_i0forward_frame_1 - 0.093 12.5 0.3 0.09 12.6 0.3 1.1 1 0 0 1 1 1 0 Mediator complex subunit 25 von Willebrand factor type A Lamprin PF06403.11 NODE_73142_length_216_cov_1.016575_g65201_i0forward_frame_1 - 0.094 12.7 2.4 0.088 12.8 2.4 1.1 1 0 0 1 1 1 0 Lamprin BTB PF00651.31 NODE_73134_length_216_cov_1.093923_g65193_i0reverse_frame_1 - 6.6e-12 45.6 0.0 7.3e-12 45.5 0.0 1.0 1 0 0 1 1 1 1 BTB/POZ domain CactinC_cactus PF09732.9 NODE_73133_length_216_cov_1.099448_g65192_i0forward_frame_1 - 0.061 13.3 0.0 0.064 13.2 0.0 1.0 1 0 0 1 1 1 0 Cactus-binding C-terminus of cactin protein YcgR_2 PF12945.7 NODE_73125_length_216_cov_1.160221_g65184_i0reverse_frame_1 - 0.17 12.0 0.6 0.36 11.0 0.2 1.7 1 1 1 2 2 2 0 Flagellar protein YcgR DUF3684 PF12449.8 NODE_73125_length_216_cov_1.160221_g65184_i0forward_frame_1 - 0.19 9.5 0.3 0.21 9.4 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3684) Microvir_J PF04726.13 NODE_73121_length_216_cov_1.187845_g65180_i0forward_frame_1 - 0.21 11.6 4.3 0.17 11.9 2.8 1.8 1 1 0 1 1 1 0 Microvirus J protein DUF999 PF06198.11 NODE_73112_length_216_cov_1.248619_g65171_i0forward_frame_1 - 0.028 14.4 0.1 0.033 14.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF999) CLTH PF10607.9 NODE_73112_length_216_cov_1.248619_g65171_i0forward_frame_1 - 0.075 12.9 0.1 0.091 12.7 0.1 1.1 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain Rubella_E2 PF05749.11 NODE_73101_length_216_cov_1.303867_g65160_i0reverse_frame_1 - 0.044 13.2 6.1 0.048 13.1 6.1 1.1 1 0 0 1 1 1 0 Rubella membrane glycoprotein E2 Med3 PF11593.8 NODE_73101_length_216_cov_1.303867_g65160_i0reverse_frame_1 - 9.8 5.2 8.5 10 5.2 8.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal zf-CCCH_4 PF18044.1 NODE_73091_length_216_cov_1.325967_g65150_i0forward_frame_1 - 0.13 12.1 2.0 0.2 11.5 2.0 1.3 1 0 0 1 1 1 0 CCCH-type zinc finger VKG_Carbox PF05090.14 NODE_73086_length_216_cov_1.325967_g65145_i0reverse_frame_1 - 0.04 12.7 0.5 0.04 12.7 0.5 1.0 1 0 0 1 1 1 0 Vitamin K-dependent gamma-carboxylase DUF2516 PF10724.9 NODE_73086_length_216_cov_1.325967_g65145_i0reverse_frame_1 - 0.07 13.4 0.4 0.094 13.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2516) RRM PF10378.9 NODE_73079_length_216_cov_1.325967_g65138_i0forward_frame_1 - 0.1 12.3 0.1 0.14 11.9 0.1 1.2 1 0 0 1 1 1 0 Putative RRM domain B12D PF06522.11 NODE_73074_length_216_cov_1.397790_g65133_i0forward_frame_1 - 0.19 11.5 0.3 0.33 10.8 0.3 1.4 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Fis1_TPR_N PF14852.6 NODE_73073_length_216_cov_1.408840_g65132_i0reverse_frame_1 - 0.0074 15.9 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Fis1 N-terminal tetratricopeptide repeat Transposase_22 PF02994.14 NODE_73073_length_216_cov_1.408840_g65132_i0reverse_frame_1 - 0.14 12.4 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 L1 transposable element RBD-like domain DUF587 PF04532.12 NODE_73073_length_216_cov_1.408840_g65132_i0forward_frame_1 - 0.03 13.6 0.2 0.031 13.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF587) Snf7 PF03357.21 NODE_73068_length_216_cov_1.453039_g65127_i0forward_frame_1 - 0.011 15.3 4.7 0.014 15.0 4.7 1.0 1 0 0 1 1 1 0 Snf7 DUF3573 PF12097.8 NODE_73068_length_216_cov_1.453039_g65127_i0forward_frame_1 - 0.043 12.6 2.0 0.048 12.5 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks373.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks373.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks373.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks373.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:35:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TMEM171 PF15471.6 NODE_73064_length_216_cov_1.469613_g65123_i0reverse_frame_1 - 0.096 11.7 0.8 0.1 11.6 0.8 1.0 1 0 0 1 1 1 0 Transmembrane protein family 171 Ras PF00071.22 NODE_73062_length_216_cov_1.524862_g65121_i0forward_frame_1 - 1.7e-16 60.3 0.0 1.8e-16 60.2 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_73062_length_216_cov_1.524862_g65121_i0forward_frame_1 - 8.3e-13 48.6 0.0 8.8e-13 48.5 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_73062_length_216_cov_1.524862_g65121_i0forward_frame_1 - 0.062 12.7 0.0 0.069 12.6 0.0 1.0 1 0 0 1 1 1 0 ADP-ribosylation factor family GTP_EFTU PF00009.27 NODE_73062_length_216_cov_1.524862_g65121_i0forward_frame_1 - 0.17 11.4 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain zf-Dof PF02701.15 NODE_73058_length_216_cov_1.546961_g65117_i0reverse_frame_1 - 0.048 13.8 5.1 0.094 12.9 5.1 1.6 1 1 0 1 1 1 0 Dof domain, zinc finger DUF716 PF04819.12 NODE_73057_length_216_cov_1.552486_g65116_i0reverse_frame_1 - 0.022 14.4 1.0 0.028 14.1 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF716) DUF3951 PF13131.6 NODE_73051_length_216_cov_1.591160_g65110_i0forward_frame_1 - 0.85 9.9 6.3 0.12 12.6 0.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3951) Pericardin_rpt PF07054.11 NODE_73048_length_216_cov_1.651934_g65107_i0reverse_frame_1 - 0.082 13.0 2.1 0.16 12.1 2.1 1.5 1 0 0 1 1 1 0 Pericardin like repeat zf-TRM13_CCCH PF11722.8 NODE_73045_length_216_cov_1.674033_g65104_i0reverse_frame_1 - 0.032 14.0 0.6 0.061 13.1 0.6 1.6 1 0 0 1 1 1 0 CCCH zinc finger in TRM13 protein MYT1 PF08474.11 NODE_73039_length_216_cov_1.718232_g65098_i0reverse_frame_1 - 0.066 13.1 0.0 0.073 13.0 0.0 1.0 1 0 0 1 1 1 0 Myelin transcription factor 1 TGase_elicitor PF16683.5 NODE_73036_length_216_cov_1.740331_g65095_i0reverse_frame_1 - 1.2 7.9 2.7 1.2 7.8 2.7 1.0 1 0 0 1 1 1 0 Transglutaminase elicitor zf-TRAF_2 PF15965.5 NODE_73035_length_216_cov_1.740331_g65094_i0reverse_frame_1 - 0.19 12.2 3.1 0.15 12.5 2.2 1.4 1 1 0 1 1 1 0 TRAF-like zinc-finger AAA PF00004.29 NODE_73035_length_216_cov_1.740331_g65094_i0forward_frame_1 - 2.5e-18 66.8 0.3 2.6e-18 66.7 0.3 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Synthase_beta PF11421.8 NODE_73035_length_216_cov_1.740331_g65094_i0forward_frame_1 - 0.13 13.0 0.4 0.2 12.4 0.4 1.3 1 0 0 1 1 1 0 ATP synthase F1 beta subunit AAA_2 PF07724.14 NODE_73035_length_216_cov_1.740331_g65094_i0forward_frame_1 - 0.13 12.4 0.3 0.76 9.9 0.3 1.9 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) AP2 PF00847.20 NODE_73032_length_216_cov_1.751381_g65091_i0reverse_frame_1 - 0.17 12.2 0.0 0.48 10.7 0.0 1.7 2 0 0 2 2 2 0 AP2 domain Opiods_neuropep PF01160.18 NODE_73031_length_216_cov_1.756906_g65090_i0forward_frame_1 - 0.39 10.8 9.1 0.1 12.7 5.3 2.0 2 0 0 2 2 2 0 Vertebrate endogenous opioids neuropeptide NCD3G PF07562.14 NODE_73030_length_216_cov_1.762431_g65089_i0forward_frame_1 - 0.11 12.5 4.7 3.3 7.7 0.5 2.2 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR MBD PF01429.19 NODE_73027_length_216_cov_1.762431_g65086_i0reverse_frame_1 - 0.035 13.8 1.1 0.044 13.5 1.1 1.1 1 0 0 1 1 1 0 Methyl-CpG binding domain GCP_N_terminal PF17681.1 NODE_73017_length_216_cov_1.806630_g65076_i0reverse_frame_1 - 0.00018 21.3 0.0 0.00018 21.3 0.0 1.1 1 0 0 1 1 1 1 Gamma tubulin complex component N-terminal DUF436 PF04260.12 NODE_73013_length_216_cov_1.856354_g65072_i0reverse_frame_1 - 0.029 14.0 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF436) Plasmod_Pvs28 PF06247.11 NODE_73007_length_216_cov_1.878453_g65066_i0forward_frame_1 - 0.011 16.1 0.2 0.015 15.6 0.2 1.3 1 0 0 1 1 1 0 Pvs28 EGF domain DUF809 PF05663.11 NODE_73005_length_216_cov_1.895028_g65064_i0reverse_frame_1 - 0.11 12.6 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) LMBR1 PF04791.16 NODE_73000_length_216_cov_1.922652_g65059_i0reverse_frame_1 - 3.9e-07 29.4 3.2 3.9e-07 29.4 3.2 1.0 1 0 0 1 1 1 1 LMBR1-like membrane protein Adeno_E3_CR2 PF02439.15 NODE_73000_length_216_cov_1.922652_g65059_i0forward_frame_1 - 0.047 13.5 4.2 0.089 12.6 4.2 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 YbhQ PF11076.8 NODE_72998_length_216_cov_1.928177_g65057_i0reverse_frame_1 - 0.18 11.8 3.6 0.21 11.6 3.6 1.2 1 0 0 1 1 1 0 Putative inner membrane protein YbhQ DUF2417 PF10329.9 NODE_72998_length_216_cov_1.928177_g65057_i0reverse_frame_1 - 7.8 5.8 13.2 8.8 5.7 13.2 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Sporozoite_P67 PF05642.11 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 0.37 8.8 4.9 0.39 8.8 4.9 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Orthopox_A36R PF05950.11 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 0.45 10.7 5.3 0.51 10.5 5.3 1.0 1 0 0 1 1 1 0 Orthopoxvirus A36R protein Zip PF02535.22 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 0.75 9.0 2.3 0.68 9.1 2.3 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter FAM176 PF14851.6 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 0.95 9.1 4.4 1 9.0 4.4 1.1 1 0 0 1 1 1 0 FAM176 family Presenilin PF01080.17 NODE_72998_length_216_cov_1.928177_g65057_i0forward_frame_1 - 0.98 8.1 2.3 0.98 8.1 2.3 1.0 1 0 0 1 1 1 0 Presenilin zf-C2H2 PF00096.26 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 2.6e-11 43.3 10.7 2e-07 31.0 2.7 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 8.3e-10 38.6 4.1 8.3e-10 38.6 4.1 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 3e-07 30.7 9.1 0.00025 21.6 2.3 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_5 PF13909.6 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 0.013 15.3 0.4 0.013 15.3 0.4 2.8 3 0 0 3 3 3 0 C2H2-type zinc-finger domain GAGA PF09237.11 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 0.015 15.1 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 GAGA factor zf-C2H2_8 PF15909.5 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 0.022 15.1 2.6 0.026 14.8 2.6 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon zinc_ribbon_9 PF14369.6 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 0.032 14.5 0.1 0.032 14.5 0.1 2.1 2 1 0 2 2 2 0 zinc-ribbon zf-Di19 PF05605.12 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 0.04 14.2 3.6 0.078 13.3 0.6 2.0 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf_ZIC PF18366.1 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 0.097 12.8 5.1 1.4 9.1 0.2 3.0 1 1 2 3 3 3 0 Zic proteins zinc finger domain zf-C2HC_2 PF13913.6 NODE_72996_length_216_cov_1.972376_g65055_i0reverse_frame_1 - 0.74 9.8 0.1 0.74 9.8 0.1 2.9 4 0 0 4 4 4 0 zinc-finger of a C2HC-type MerE PF05052.12 NODE_72996_length_216_cov_1.972376_g65055_i0forward_frame_1 - 0.068 13.1 0.0 0.08 12.9 0.0 1.2 1 0 0 1 1 1 0 MerE protein SWIM PF04434.17 NODE_72993_length_216_cov_1.988950_g65052_i0reverse_frame_1 - 0.12 12.1 0.3 0.25 11.0 0.2 1.6 2 0 0 2 2 2 0 SWIM zinc finger TGT PF01702.18 NODE_72988_length_216_cov_2.066298_g65047_i0reverse_frame_1 - 0.014 14.6 0.0 0.014 14.6 0.0 1.0 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase NIBRIN_BRCT_II PF16508.5 NODE_72988_length_216_cov_2.066298_g65047_i0reverse_frame_1 - 0.14 12.5 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Second BRCT domain on Nijmegen syndrome breakage protein TMEM239 PF15841.5 NODE_72987_length_216_cov_2.093923_g65046_i0forward_frame_1 - 1.4 8.8 7.2 1.6 8.6 7.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family Death PF00531.22 NODE_72986_length_216_cov_2.099448_g65045_i0reverse_frame_1 - 0.063 13.4 0.2 0.11 12.7 0.1 1.5 2 0 0 2 2 2 0 Death domain HVSL PF09749.9 NODE_72973_length_216_cov_2.193370_g65032_i0reverse_frame_1 - 0.0036 16.8 1.5 0.0041 16.6 1.5 1.0 1 0 0 1 1 1 1 Uncharacterised conserved protein YmcE_antitoxin PF15939.5 NODE_72969_length_216_cov_2.215470_g65028_i0forward_frame_1 - 0.33 11.1 5.2 0.22 11.7 3.9 1.4 1 1 1 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system ARL6IP6 PF15062.6 NODE_72964_length_216_cov_2.276243_g65023_i0reverse_frame_1 - 0.084 13.0 0.4 0.1 12.8 0.4 1.1 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix Ribosomal_S14 PF00253.21 NODE_72961_length_216_cov_2.298343_g65020_i0reverse_frame_1 - 0.24 11.2 4.2 0.41 10.4 4.2 1.3 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e vMSA PF00695.19 NODE_72959_length_216_cov_2.325967_g65018_i0forward_frame_1 - 0.21 10.6 2.7 0.23 10.5 2.7 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus COBRA1 PF06209.13 NODE_72957_length_216_cov_2.342541_g65016_i0reverse_frame_1 - 0.2 10.5 3.2 0.23 10.3 3.2 1.0 1 0 0 1 1 1 0 Cofactor of BRCA1 (COBRA1) Epimerase PF01370.21 NODE_72952_length_216_cov_2.408840_g65011_i0forward_frame_1 - 2.3e-05 24.0 0.0 2.5e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 NODE_72952_length_216_cov_2.408840_g65011_i0forward_frame_1 - 0.00054 19.9 0.0 0.00056 19.8 0.0 1.0 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 NODE_72952_length_216_cov_2.408840_g65011_i0forward_frame_1 - 0.0093 15.0 0.0 0.0096 15.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family DUF716 PF04819.12 NODE_72947_length_216_cov_2.430939_g65006_i0reverse_frame_1 - 0.14 11.8 0.8 0.31 10.7 0.8 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF716) NADH_dehy_S2_C PF06444.11 NODE_72947_length_216_cov_2.430939_g65006_i0forward_frame_1 - 0.059 13.9 1.6 0.13 12.8 1.6 1.5 1 1 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus Caveolin PF01146.17 NODE_72947_length_216_cov_2.430939_g65006_i0forward_frame_1 - 0.07 13.1 1.3 0.077 12.9 1.3 1.1 1 0 0 1 1 1 0 Caveolin RBFA PF02033.18 NODE_72946_length_216_cov_2.453039_g65005_i0forward_frame_1 - 0.011 16.2 0.0 0.013 15.9 0.0 1.2 1 0 0 1 1 1 0 Ribosome-binding factor A Phage_integrase PF00589.22 NODE_72946_length_216_cov_2.453039_g65005_i0forward_frame_1 - 0.077 12.8 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 Phage integrase family FIN1 PF17300.2 NODE_72945_length_216_cov_2.464088_g65004_i0reverse_frame_1 - 0.17 11.3 4.8 0.19 11.2 4.8 1.1 1 0 0 1 1 1 0 Filaments in between nuclei protein-1 DUF4734 PF15881.5 NODE_72942_length_216_cov_2.546961_g65001_i0reverse_frame_1 - 0.036 14.2 0.2 0.04 14.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4734) Ago_N_1 PF18351.1 NODE_72938_length_216_cov_2.624309_g64997_i0reverse_frame_1 - 0.23 11.9 0.0 0.27 11.7 0.0 1.1 1 0 0 1 1 1 0 Fungal Argonaute N-terminal domain hEGF PF12661.7 NODE_72937_length_216_cov_2.646409_g64996_i0reverse_frame_1 - 0.8 10.4 0.2 0.8 10.4 0.2 2.8 4 0 0 4 4 4 0 Human growth factor-like EGF Phage_Mu_Gam PF07352.12 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.0013 18.6 2.1 0.0015 18.5 2.1 1.1 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein Topoisom_I PF01028.20 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.0016 17.7 3.4 0.0018 17.6 3.4 1.0 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core Fzo_mitofusin PF04799.13 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.0052 16.3 4.9 0.0054 16.3 4.9 1.0 1 0 0 1 1 1 1 fzo-like conserved region ATG16 PF08614.11 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.0087 16.3 4.0 0.01 16.1 4.0 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) DUF4298 PF14131.6 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.063 13.2 3.5 0.077 13.0 3.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Nre_C PF04895.12 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.071 13.0 0.3 0.087 12.8 0.3 1.1 1 0 0 1 1 1 0 Archaeal Nre, C-terminal DUF745 PF05335.13 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.15 11.7 2.2 0.16 11.7 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF745) YlqD PF11068.8 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 0.24 11.8 5.7 0.27 11.6 5.7 1.0 1 0 0 1 1 1 0 YlqD protein IKKbetaNEMObind PF12179.8 NODE_72936_length_216_cov_2.651934_g64995_i0forward_frame_1 - 1.1 9.3 4.9 8 6.6 0.5 2.4 2 1 0 2 2 2 0 I-kappa-kinase-beta NEMO binding domain Pox_A12 PF04651.13 NODE_72935_length_216_cov_2.662983_g64994_i0forward_frame_1 - 0.17 11.9 0.0 0.18 11.8 0.0 1.0 1 0 0 1 1 1 0 Poxvirus A12 protein nos_propeller PF18764.1 NODE_72932_length_216_cov_2.690608_g64991_i0forward_frame_1 - 0.04 13.8 0.0 0.055 13.4 0.0 1.1 1 0 0 1 1 1 0 Nitrous oxide reductase propeller repeat LapA_dom PF06305.11 NODE_72928_length_216_cov_2.889503_g64987_i0forward_frame_1 - 0.19 11.5 4.1 0.46 10.3 3.2 1.9 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain EOS1 PF12326.8 NODE_72917_length_216_cov_3.165746_g64976_i0forward_frame_1 - 0.38 10.7 3.6 0.51 10.3 3.6 1.2 1 0 0 1 1 1 0 N-glycosylation protein PGC7_Stella PF15549.6 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_1 - 4.5 7.2 9.1 5 7.1 9.1 1.0 1 0 0 1 1 1 0 PGC7/Stella/Dppa3 domain ABC2_membrane_3 PF12698.7 NODE_72907_length_216_cov_24.635359_g64966_i0forward_frame_1 - 0.016 14.3 0.2 0.017 14.3 0.2 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Pox_E10 PF04805.12 NODE_72907_length_216_cov_24.635359_g64966_i0forward_frame_1 - 0.69 9.8 3.8 0.92 9.4 3.8 1.2 1 0 0 1 1 1 0 E10-like protein conserved region CD24 PF14984.6 NODE_72903_length_216_cov_30.215470_g64962_i0reverse_frame_1 - 0.041 14.1 0.2 0.041 14.1 0.2 1.5 2 0 0 2 2 2 0 CD24 protein UCH PF00443.29 NODE_72895_length_216_cov_39.707182_g64954_i0reverse_frame_1 - 8.6e-12 45.1 0.5 1e-11 44.8 0.5 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF3136 PF11334.8 NODE_72892_length_216_cov_45.635359_g64951_i0reverse_frame_1 - 0.11 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) PAS_3 PF08447.12 NODE_72891_length_216_cov_45.895028_g64950_i0reverse_frame_1 - 0.053 13.8 0.0 1.3 9.3 0.0 2.0 1 1 1 2 2 2 0 PAS fold Colipase PF01114.18 NODE_72884_length_216_cov_52.016575_g64943_i0reverse_frame_1 - 0.015 14.9 3.3 0.015 14.9 3.3 1.7 2 0 0 2 2 2 0 Colipase, N-terminal domain Pkinase PF00069.25 NODE_72883_length_216_cov_52.392265_g64942_i0reverse_frame_1 - 0.021 14.2 0.1 0.022 14.1 0.1 1.0 1 0 0 1 1 1 0 Protein kinase domain KKLCAg1 PF15204.6 NODE_72880_length_216_cov_54.513812_g64939_i0reverse_frame_1 - 0.032 14.3 0.2 0.035 14.2 0.2 1.1 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 Fer4_7 PF12838.7 NODE_72878_length_216_cov_56.353591_g64937_i0forward_frame_1 - 0.021 15.4 3.2 0.036 14.6 1.0 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain SOCS PF12610.8 NODE_72877_length_216_cov_56.696133_g64936_i0forward_frame_1 - 0.036 14.5 1.2 0.061 13.7 1.2 1.3 1 0 0 1 1 1 0 Suppressor of cytokine signalling IlvC PF01450.19 NODE_72874_length_216_cov_60.215470_g64933_i0forward_frame_1 - 0.00013 22.3 0.1 0.00014 22.1 0.1 1.0 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain Tox-SHH PF15652.6 NODE_72874_length_216_cov_60.215470_g64933_i0forward_frame_1 - 0.13 13.2 0.1 0.16 12.9 0.1 1.1 1 0 0 1 1 1 0 HNH/Endo VII superfamily toxin with a SHH signature Yuri_gagarin PF15934.5 NODE_72872_length_216_cov_62.911602_g64931_i0forward_frame_1 - 0.044 13.6 0.2 0.052 13.4 0.2 1.1 1 0 0 1 1 1 0 Yuri gagarin RNA_pol_A_bac PF01000.26 NODE_72869_length_216_cov_68.646409_g64928_i0forward_frame_1 - 1.6e-07 31.7 0.1 2e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain CEBP_ZZ PF16366.5 NODE_72864_length_216_cov_80.762431_g64923_i0reverse_frame_1 - 1 9.7 6.6 0.93 9.8 2.6 2.5 1 1 2 3 3 3 0 Cytoplasmic polyadenylation element-binding protein ZZ domain DUF4732 PF15876.5 NODE_72849_length_216_cov_145.348066_g64908_i0reverse_frame_1 - 0.15 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4732) Evr1_Alr PF04777.13 NODE_72841_length_216_cov_223.497238_g64900_i0reverse_frame_1 - 1.2e-06 28.9 0.0 1.5e-06 28.6 0.0 1.1 1 0 0 1 1 1 1 Erv1 / Alr family Otopetrin PF03189.13 NODE_72840_length_216_cov_240.569061_g64899_i0forward_frame_1 - 0.0047 15.8 0.2 0.0047 15.8 0.2 1.0 1 0 0 1 1 1 1 Otopetrin SieB PF14163.6 NODE_72840_length_216_cov_240.569061_g64899_i0forward_frame_1 - 0.0056 16.2 0.2 0.0058 16.1 0.2 1.0 1 0 0 1 1 1 1 Super-infection exclusion protein B Spo7 PF03907.13 NODE_72840_length_216_cov_240.569061_g64899_i0forward_frame_1 - 0.046 13.2 0.4 0.049 13.1 0.4 1.0 1 0 0 1 1 1 0 Spo7-like protein PMR5N PF14416.6 NODE_72835_length_216_cov_470.790055_g64894_i0reverse_frame_1 - 0.0088 16.3 0.4 0.011 16.1 0.4 1.2 1 0 0 1 1 1 1 PMR5 N terminal Domain Ammonium_transp PF00909.21 NODE_72827_length_216_cov_1262.856354_g64886_i0forward_frame_1 - 5.9e-15 54.9 6.3 6.6e-15 54.7 6.3 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family DUF5516 PF17637.2 NODE_72825_length_217_cov_0.818681_g64884_i0reverse_frame_2 - 0.061 13.1 0.3 0.1 12.3 0.3 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5516) Protamine_P2 PF00841.19 NODE_72822_length_217_cov_0.868132_g64881_i0forward_frame_3 - 0.073 13.6 0.3 0.12 12.8 0.3 1.3 1 0 0 1 1 1 0 Sperm histone P2 Lipid_bd PF12888.7 NODE_72819_length_217_cov_0.873626_g64878_i0reverse_frame_2 - 0.09 13.2 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Lipid-binding putative hydrolase Na_Ca_ex_C PF16494.5 NODE_72818_length_217_cov_0.873626_g64877_i0reverse_frame_3 - 0.064 13.7 0.2 0.081 13.4 0.2 1.2 1 0 0 1 1 1 0 C-terminal extension of sodium/calcium exchanger domain DUF2811 PF10929.8 NODE_72818_length_217_cov_0.873626_g64877_i0reverse_frame_3 - 0.076 13.3 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2811) DUF3938 PF13074.6 NODE_72817_length_217_cov_0.873626_g64876_i0forward_frame_3 - 0.086 13.1 0.0 0.097 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3938) TNFR_16_TM PF18422.1 NODE_72814_length_217_cov_0.879121_g64873_i0reverse_frame_3 - 0.15 12.0 0.3 0.23 11.5 0.3 1.3 1 0 0 1 1 1 0 Tumor necrosis factor receptor member 16 trans-membrane domain Tmemb_9 PF05434.11 NODE_72814_length_217_cov_0.879121_g64873_i0reverse_frame_2 - 0.052 13.4 0.1 0.064 13.1 0.1 1.1 1 0 0 1 1 1 0 TMEM9 Enterotoxin_HS1 PF08090.11 NODE_72812_length_217_cov_0.879121_g64871_i0reverse_frame_2 - 1.3 9.0 15.1 2.1 8.4 4.3 3.1 2 1 0 2 2 2 0 Heat stable E.coli enterotoxin 1 FAM24 PF15193.6 NODE_72811_length_217_cov_0.879121_g64870_i0reverse_frame_3 - 0.064 14.0 10.6 0.085 13.7 10.6 1.3 1 1 0 1 1 1 0 FAM24 family Helicase_IV_N PF12462.8 NODE_72807_length_217_cov_0.879121_g64866_i0reverse_frame_3 - 0.097 12.6 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal CBF PF03914.17 NODE_72803_length_217_cov_0.879121_g64862_i0reverse_frame_2 - 0.0017 18.4 0.3 0.0019 18.3 0.3 1.0 1 0 0 1 1 1 1 CBF/Mak21 family Baculo_p48 PF04878.13 NODE_72803_length_217_cov_0.879121_g64862_i0forward_frame_3 - 0.095 11.6 1.0 0.11 11.5 1.0 1.0 1 0 0 1 1 1 0 Baculovirus P48 protein Ribosomal_S16 PF00886.19 NODE_72801_length_217_cov_0.923077_g64860_i0forward_frame_3 - 0.02 15.0 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S16 Yeast_MT PF11403.8 NODE_72800_length_217_cov_0.934066_g64859_i0forward_frame_2 - 0.14 12.8 6.4 0.21 12.2 6.4 1.4 1 0 0 1 1 1 0 Yeast metallothionein BES1_N PF05687.13 NODE_72797_length_217_cov_0.978022_g64856_i0forward_frame_2 - 0.059 13.8 6.9 0.065 13.6 6.9 1.0 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal DUF4575 PF15143.6 NODE_72794_length_217_cov_1.021978_g64853_i0reverse_frame_2 - 0.02 15.1 1.3 0.023 14.9 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4575) Smoa_sbd PF17885.1 NODE_72793_length_217_cov_1.038462_g64852_i0forward_frame_2 - 0.16 12.1 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Styrene monooxygenase A putative substrate binding domain S1-P1_nuclease PF02265.16 NODE_72790_length_217_cov_1.060440_g64849_i0reverse_frame_3 - 0.00016 21.6 0.0 0.00017 21.5 0.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease GATase_5 PF13507.6 NODE_72786_length_217_cov_1.082418_g64845_i0reverse_frame_3 - 1.3e-16 60.5 0.0 1.5e-16 60.3 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain ORC6 PF05460.13 NODE_72785_length_217_cov_1.087912_g64844_i0reverse_frame_2 - 0.11 11.7 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Ras PF00071.22 NODE_72784_length_217_cov_1.093407_g64843_i0reverse_frame_2 - 0.0006 19.5 0.1 0.0011 18.6 0.1 1.4 1 1 0 1 1 1 1 Ras family Roc PF08477.13 NODE_72784_length_217_cov_1.093407_g64843_i0reverse_frame_2 - 0.016 15.5 1.2 0.039 14.2 1.1 1.8 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Toxin_11 PF07473.11 NODE_72784_length_217_cov_1.093407_g64843_i0forward_frame_2 - 1.1 9.3 6.2 1.5 9.0 0.3 2.3 2 0 0 2 2 2 0 Spasmodic peptide gm9a; conotoxin from Conus species Protamine_P1 PF00260.20 NODE_72782_length_217_cov_1.098901_g64841_i0reverse_frame_3 - 0.41 10.8 14.2 0.62 10.2 14.2 1.3 1 0 0 1 1 1 0 Protamine P1 BCMA-Tall_bind PF09257.10 NODE_72777_length_217_cov_1.148352_g64836_i0reverse_frame_2 - 0.041 14.0 0.8 0.072 13.2 0.8 1.4 1 1 0 1 1 1 0 BCMA, TALL-1 binding U3_assoc_6 PF08640.11 NODE_72773_length_217_cov_1.181319_g64832_i0reverse_frame_3 - 0.00025 21.0 0.7 0.00034 20.6 0.7 1.2 1 0 0 1 1 1 1 U3 small nucleolar RNA-associated protein 6 VasL PF12486.8 NODE_72773_length_217_cov_1.181319_g64832_i0reverse_frame_2 - 0.17 11.7 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, EvfB, or VasL RVT_1 PF00078.27 NODE_72772_length_217_cov_1.197802_g64831_i0reverse_frame_3 - 0.056 12.9 0.0 0.07 12.6 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) BRE1 PF08647.11 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.014 15.5 4.6 0.016 15.3 4.6 1.0 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase SLATT_6 PF18169.1 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.023 14.3 0.1 0.038 13.6 0.1 1.3 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 ATP-synt_D PF01813.17 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.025 14.4 3.9 0.028 14.3 3.9 1.0 1 0 0 1 1 1 0 ATP synthase subunit D KxDL PF10241.9 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.028 14.7 3.2 0.032 14.5 3.2 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein DUF3287 PF11690.8 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.061 13.1 2.0 0.091 12.5 2.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3287) DUF1664 PF07889.12 NODE_72766_length_217_cov_1.252747_g64825_i0reverse_frame_2 - 0.17 11.9 2.6 0.19 11.7 2.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Transposase_22 PF02994.14 NODE_72764_length_217_cov_1.269231_g64823_i0forward_frame_3 - 0.08 13.1 0.0 0.095 12.9 0.0 1.0 1 0 0 1 1 1 0 L1 transposable element RBD-like domain DUF2754 PF10953.8 NODE_72761_length_217_cov_1.274725_g64820_i0reverse_frame_2 - 0.052 13.8 0.1 0.066 13.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) MFS_1 PF07690.16 NODE_72759_length_217_cov_1.313187_g64818_i0forward_frame_3 - 0.00013 21.1 3.4 0.00013 21.0 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily LacY_symp PF01306.19 NODE_72759_length_217_cov_1.313187_g64818_i0forward_frame_3 - 0.0054 15.6 0.2 0.0063 15.3 0.2 1.2 1 0 0 1 1 1 1 LacY proton/sugar symporter Sugar_tr PF00083.24 NODE_72759_length_217_cov_1.313187_g64818_i0forward_frame_3 - 0.013 14.4 1.1 0.014 14.3 1.1 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter RabGGT_insert PF07711.11 NODE_72759_length_217_cov_1.313187_g64818_i0forward_frame_3 - 0.15 12.6 0.0 0.19 12.3 0.0 1.2 1 0 0 1 1 1 0 Rab geranylgeranyl transferase alpha-subunit, insert domain PAP2 PF01569.21 NODE_72758_length_217_cov_1.313187_g64817_i0forward_frame_3 - 0.086 12.6 1.5 0.095 12.5 1.5 1.0 1 0 0 1 1 1 0 PAP2 superfamily Mit_KHE1 PF10173.9 NODE_72757_length_217_cov_1.313187_g64816_i0forward_frame_3 - 0.0099 16.0 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 1 Mitochondrial K+-H+ exchange-related FPRL1_inhibitor PF16104.5 NODE_72757_length_217_cov_1.313187_g64816_i0forward_frame_3 - 0.049 13.8 0.1 0.058 13.5 0.1 1.2 1 1 0 1 1 1 0 Formyl peptide receptor-like 1 inhibitory protein EST1_DNA_bind PF10373.9 NODE_72756_length_217_cov_1.313187_g64815_i0forward_frame_2 - 0.27 10.7 1.9 0.29 10.6 1.9 1.1 1 0 0 1 1 1 0 Est1 DNA/RNA binding domain SNARE PF05739.19 NODE_72755_length_217_cov_1.313187_g64814_i0reverse_frame_3 - 0.99 9.5 2.0 1.8 8.6 2.0 1.4 1 0 0 1 1 1 0 SNARE domain Xol-1_GHMP-like PF09109.10 NODE_72751_length_217_cov_1.313187_g64810_i0forward_frame_2 - 0.16 11.8 0.1 0.19 11.6 0.1 1.2 1 1 0 1 1 1 0 Switch protein XOL-1, GHMP-like MSSP PF03940.13 NODE_72748_length_217_cov_1.318681_g64807_i0forward_frame_3 - 0.018 14.6 5.8 0.018 14.6 5.8 1.9 2 0 0 2 2 2 0 Male specific sperm protein Patched PF02460.18 NODE_72747_length_217_cov_1.318681_g64806_i0reverse_frame_3 - 1.8 6.5 8.7 1.8 6.5 8.7 1.0 1 0 0 1 1 1 0 Patched family LRR_6 PF13516.6 NODE_72745_length_217_cov_1.318681_g64804_i0reverse_frame_2 - 0.011 15.7 0.1 0.084 13.0 0.1 2.3 3 0 0 3 3 3 0 Leucine Rich repeat LRR_8 PF13855.6 NODE_72745_length_217_cov_1.318681_g64804_i0reverse_frame_2 - 0.04 13.7 0.1 0.29 10.9 0.1 2.2 3 0 0 3 3 3 0 Leucine rich repeat LRR_4 PF12799.7 NODE_72745_length_217_cov_1.318681_g64804_i0reverse_frame_2 - 0.046 14.2 1.9 0.5 10.9 1.9 2.3 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) DUF1410 PF07198.11 NODE_72745_length_217_cov_1.318681_g64804_i0reverse_frame_2 - 0.052 14.1 0.9 0.11 13.0 0.1 1.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1410) DUF1430 PF07242.11 NODE_72741_length_217_cov_1.324176_g64800_i0reverse_frame_2 - 0.0098 16.1 0.8 0.014 15.7 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1430) Benyvirus_14KDa PF07255.11 NODE_72740_length_217_cov_1.340659_g64799_i0reverse_frame_2 - 0.11 12.7 0.2 0.12 12.6 0.2 1.1 1 0 0 1 1 1 0 Benyvirus 14KDa protein UME PF08064.13 NODE_72740_length_217_cov_1.340659_g64799_i0forward_frame_3 - 0.094 12.6 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 UME (NUC010) domain THDPS_N PF14790.6 NODE_72735_length_217_cov_1.368132_g64794_i0reverse_frame_3 - 0.0099 15.7 0.0 0.011 15.6 0.0 1.1 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal Zn-C2H2_12 PF18112.1 NODE_72735_length_217_cov_1.368132_g64794_i0forward_frame_3 - 0.0069 16.8 0.1 0.019 15.4 0.1 1.7 1 0 0 1 1 1 1 Autophagy receptor zinc finger-C2H2 domain Lustrin_cystein PF14625.6 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.0028 18.0 16.8 0.32 11.4 4.1 3.2 1 1 2 3 3 3 2 Lustrin, cysteine-rich repeated domain FYRN PF05964.14 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.021 14.7 1.6 0.35 10.8 0.1 2.2 2 0 0 2 2 2 0 F/Y-rich N-terminus Granulin PF00396.18 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.08 13.3 14.0 1.6 9.1 0.8 3.0 1 1 1 2 2 2 0 Granulin Opy2 PF09463.10 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.26 11.6 11.9 4.4 7.7 4.0 3.0 2 1 1 3 3 3 0 Opy2 protein Inhibitor_I36 PF03995.13 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 0.52 10.3 7.6 6.9 6.7 0.2 3.1 3 0 0 3 3 3 0 Peptidase inhibitor family I36 Ephrin_rec_like PF07699.13 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 1.5 8.6 19.0 9.9 6.0 13.0 3.4 1 1 1 2 2 2 0 Putative ephrin-receptor like AidB_N PF18158.1 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_3 - 4.8 7.1 6.5 5.1 7.0 0.7 2.1 2 0 0 2 2 2 0 Adaptive response protein AidB N-terminal domain Frataxin_Cyay PF01491.16 NODE_72734_length_217_cov_1.373626_g64793_i0forward_frame_2 - 0.044 13.9 0.0 0.047 13.8 0.0 1.1 1 0 0 1 1 1 0 Frataxin-like domain Sas10_Utp3 PF04000.15 NODE_72732_length_217_cov_1.379121_g64791_i0reverse_frame_3 - 0.071 13.7 0.2 0.078 13.6 0.2 1.2 1 0 0 1 1 1 0 Sas10/Utp3/C1D family TTL PF03133.15 NODE_72731_length_217_cov_1.379121_g64790_i0forward_frame_2 - 1.5e-20 73.5 1.2 1.8e-20 73.3 1.2 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ODC_AZ PF02100.17 NODE_72730_length_217_cov_1.384615_g64789_i0forward_frame_2 - 0.041 13.9 0.0 0.041 13.9 0.0 1.1 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme CP2 PF04516.15 NODE_72729_length_217_cov_1.423077_g64788_i0reverse_frame_3 - 0.023 14.0 0.2 0.026 13.8 0.2 1.0 1 0 0 1 1 1 0 CP2 transcription factor HTH_26 PF13443.6 NODE_72729_length_217_cov_1.423077_g64788_i0reverse_frame_2 - 0.023 15.1 0.0 0.026 15.0 0.0 1.2 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain Imm-NTF2-2 PF15631.6 NODE_72726_length_217_cov_1.439560_g64785_i0reverse_frame_2 - 0.039 14.2 0.4 0.054 13.8 0.4 1.2 1 0 0 1 1 1 0 NTF2 fold immunity protein TMEM156 PF15106.6 NODE_72726_length_217_cov_1.439560_g64785_i0forward_frame_2 - 0.71 9.3 4.3 0.9 8.9 4.3 1.1 1 0 0 1 1 1 0 TMEM156 protein family FERM_N_2 PF18038.1 NODE_72717_length_217_cov_1.478022_g64776_i0forward_frame_2 - 0.06 14.2 0.0 0.063 14.1 0.0 1.1 1 0 0 1 1 1 0 FERM N-terminal domain Toxin_21 PF08091.11 NODE_72715_length_217_cov_1.489011_g64774_i0forward_frame_3 - 0.78 9.7 5.3 1.8 8.5 5.3 1.7 1 1 0 1 1 1 0 Spider insecticidal peptide LigT_PEase PF02834.16 NODE_72715_length_217_cov_1.489011_g64774_i0forward_frame_2 - 0.049 13.8 0.2 0.081 13.1 0.1 1.6 2 0 0 2 2 2 0 LigT like Phosphoesterase Helo_like_N PF17111.5 NODE_72714_length_217_cov_1.494505_g64773_i0reverse_frame_3 - 0.091 12.1 0.1 0.096 12.0 0.1 1.0 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins PGG PF13962.6 NODE_72707_length_217_cov_1.543956_g64766_i0forward_frame_2 - 0.14 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function MotB_plug PF13677.6 NODE_72705_length_217_cov_1.554945_g64764_i0forward_frame_3 - 0.26 10.9 1.6 0.44 10.2 1.0 1.6 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB RseC_MucC PF04246.12 NODE_72703_length_217_cov_1.560440_g64762_i0reverse_frame_3 - 1.5 8.8 5.6 1.7 8.6 5.6 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC RVT_1 PF00078.27 NODE_72703_length_217_cov_1.560440_g64762_i0forward_frame_2 - 0.0048 16.4 0.0 0.0059 16.1 0.0 1.2 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DAP_B PF07930.12 NODE_72702_length_217_cov_1.565934_g64761_i0reverse_frame_2 - 0.026 14.5 0.0 0.031 14.3 0.0 1.0 1 0 0 1 1 1 0 D-aminopeptidase, domain B Corona_S2 PF01601.16 NODE_72701_length_217_cov_1.587912_g64760_i0forward_frame_3 - 0.2 10.1 1.3 0.19 10.2 1.3 1.0 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein Transket_pyr PF02779.24 NODE_72701_length_217_cov_1.587912_g64760_i0forward_frame_2 - 1.6e-07 31.2 0.0 1.7e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain PET117 PF15786.5 NODE_72700_length_217_cov_1.587912_g64759_i0reverse_frame_3 - 0.07 13.4 0.0 0.084 13.1 0.0 1.2 1 0 0 1 1 1 0 PET assembly of cytochrome c oxidase, mitochondrial Sigma70_r2 PF04542.14 NODE_72699_length_217_cov_1.593407_g64758_i0forward_frame_2 - 0.052 13.3 0.1 0.073 12.8 0.1 1.2 1 0 0 1 1 1 0 Sigma-70 region 2 Nbl1_Borealin_N PF10444.9 NODE_72699_length_217_cov_1.593407_g64758_i0forward_frame_2 - 0.11 12.1 0.2 0.18 11.5 0.2 1.3 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal RNA_pol_N PF01194.17 NODE_72698_length_217_cov_1.609890_g64757_i0forward_frame_2 - 0.052 13.9 2.1 0.092 13.1 2.1 1.6 1 1 0 1 1 1 0 RNA polymerases N / 8 kDa subunit YkuI_C PF10388.9 NODE_72697_length_217_cov_1.620879_g64756_i0reverse_frame_2 - 0.0074 16.1 0.6 0.0082 16.0 0.6 1.1 1 0 0 1 1 1 1 EAL-domain associated signalling protein domain MLIP PF15274.6 NODE_72697_length_217_cov_1.620879_g64756_i0reverse_frame_2 - 0.11 12.4 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Muscular LMNA-interacting protein TPR_2 PF07719.17 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 2.1e-07 30.5 0.0 0.029 14.5 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 7.9e-06 25.5 0.0 0.032 14.1 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.0058 16.7 0.0 2.7 8.4 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.0073 16.9 0.0 1.1 10.0 0.0 2.1 1 1 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.011 16.0 0.1 0.35 11.4 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.015 14.9 0.0 0.018 14.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB1_HrpK) Coatomer_E PF04733.14 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.022 14.2 0.0 0.025 14.0 0.0 1.0 1 0 0 1 1 1 0 Coatomer epsilon subunit TPR_11 PF13414.6 NODE_72695_length_217_cov_1.631868_g64754_i0reverse_frame_2 - 0.028 14.1 0.1 0.51 10.1 0.0 2.6 1 1 2 3 3 3 0 TPR repeat Spike_rec_bind PF09408.10 NODE_72694_length_217_cov_1.637363_g64753_i0forward_frame_3 - 0.13 12.0 0.1 0.15 11.8 0.1 1.1 1 0 0 1 1 1 0 Spike receptor binding domain MORN PF02493.20 NODE_72693_length_217_cov_1.642857_g64752_i0reverse_frame_3 - 0.02 14.8 3.0 0.046 13.6 0.1 2.7 3 0 0 3 3 3 0 MORN repeat DUF1435 PF07256.12 NODE_72693_length_217_cov_1.642857_g64752_i0forward_frame_3 - 0.031 14.4 0.4 0.051 13.7 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1435) Yae1_N PF09811.9 NODE_72691_length_217_cov_1.664835_g64750_i0reverse_frame_3 - 0.074 12.8 1.4 0.11 12.2 1.4 1.2 1 0 0 1 1 1 0 Essential protein Yae1, N terminal CART PF06373.11 NODE_72690_length_217_cov_1.692308_g64749_i0forward_frame_2 - 0.054 13.7 3.2 0.054 13.7 3.2 1.7 1 1 1 2 2 2 0 Cocaine and amphetamine regulated transcript protein (CART) PDGF PF00341.17 NODE_72689_length_217_cov_1.692308_g64748_i0reverse_frame_3 - 0.13 12.6 0.8 0.21 11.9 0.8 1.4 1 1 0 1 1 1 0 PDGF/VEGF domain Herpes_UL55 PF04537.12 NODE_72688_length_217_cov_1.697802_g64747_i0forward_frame_2 - 0.017 15.2 0.1 0.017 15.2 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus UL55 protein Herpes_capsid PF06112.11 NODE_72683_length_217_cov_1.730769_g64742_i0forward_frame_2 - 0.17 11.9 0.9 0.21 11.7 0.9 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF3527 PF12043.8 NODE_72681_length_217_cov_1.736264_g64740_i0reverse_frame_3 - 0.28 10.7 4.9 0.31 10.6 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3527) DUF5409 PF17421.2 NODE_72677_length_217_cov_1.752747_g64736_i0forward_frame_2 - 0.0045 17.7 0.1 0.0055 17.4 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5409) RE_Eco47II PF09553.10 NODE_72677_length_217_cov_1.752747_g64736_i0forward_frame_2 - 0.013 15.1 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Eco47II restriction endonuclease UL45 PF05473.12 NODE_72676_length_217_cov_1.752747_g64735_i0reverse_frame_2 - 0.054 13.1 2.0 0.059 13.0 2.0 1.0 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like Lustrin_cystein PF14625.6 NODE_72675_length_217_cov_1.752747_g64734_i0reverse_frame_3 - 0.78 10.2 5.4 0.23 11.9 2.4 1.7 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain NICE-1 PF15845.5 NODE_72675_length_217_cov_1.752747_g64734_i0reverse_frame_3 - 1.4 9.8 9.6 1.8 9.4 9.6 1.4 1 1 0 1 1 1 0 Cysteine-rich C-terminal 1 family DUF3277 PF11681.8 NODE_72673_length_217_cov_1.752747_g64732_i0reverse_frame_2 - 0.11 12.4 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3277) PPR_long PF17177.4 NODE_72667_length_217_cov_1.758242_g64726_i0forward_frame_2 - 0.02 14.3 0.3 0.022 14.1 0.3 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP IQ PF00612.27 NODE_72667_length_217_cov_1.758242_g64726_i0forward_frame_2 - 0.04 13.7 0.5 0.13 12.1 0.5 1.9 1 0 0 1 1 1 0 IQ calmodulin-binding motif Ribosomal_L31e PF01198.19 NODE_72667_length_217_cov_1.758242_g64726_i0forward_frame_2 - 0.069 13.4 0.6 0.15 12.3 0.6 1.7 1 1 0 1 1 1 0 Ribosomal protein L31e VHL PF01847.16 NODE_72664_length_217_cov_1.763736_g64723_i0reverse_frame_2 - 0.083 12.8 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 VHL beta domain MORN PF02493.20 NODE_72662_length_217_cov_1.818681_g64721_i0reverse_frame_3 - 3.5e-06 26.6 12.2 0.023 14.6 0.9 3.5 3 1 0 3 3 3 3 MORN repeat MSL1_dimer PF16801.5 NODE_72661_length_217_cov_1.818681_g64720_i0forward_frame_2 - 0.0098 15.6 0.1 0.019 14.7 0.1 1.4 1 0 0 1 1 1 1 Dimerisation domain of Male-specific-Lethal 1 PKcGMP_CC PF16808.5 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.0024 17.7 1.1 0.0024 17.7 1.1 3.2 2 2 1 3 3 3 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Phlebovirus_NSM PF07246.11 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.007 15.8 9.7 0.0083 15.5 9.7 1.0 1 0 0 1 1 1 1 Phlebovirus nonstructural protein NS-M TMF_DNA_bd PF12329.8 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.015 15.3 17.7 0.46 10.5 5.5 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding ATG16 PF08614.11 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.02 15.1 10.3 0.022 15.0 10.3 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) HR1 PF02185.16 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.023 14.8 3.9 0.023 14.8 3.9 2.0 1 1 1 2 2 2 0 Hr1 repeat Cut12 PF11500.8 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.028 14.4 5.9 0.029 14.3 5.9 1.2 1 0 0 1 1 1 0 Spindle pole body formation-associated protein Rootletin PF15035.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.084 12.9 10.7 0.18 11.8 2.6 2.0 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion DUF641 PF04859.12 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.099 13.0 8.8 1.8 8.9 1.1 2.0 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Mod_r PF07200.13 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.11 12.6 11.3 0.11 12.6 11.3 1.0 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein BST2 PF16716.5 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.12 13.0 12.7 0.53 10.9 12.6 1.8 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 DUF4200 PF13863.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.2 12.1 14.7 0.21 12.0 14.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) ZapB PF06005.12 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.21 12.1 11.7 28 5.2 11.7 2.0 1 1 0 1 1 1 0 Cell division protein ZapB DUF724 PF05266.14 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.23 11.3 9.3 0.25 11.2 9.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) BRE1 PF08647.11 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.25 11.4 14.1 4.6 7.4 14.1 2.0 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase MPS2 PF17060.5 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.26 10.5 8.0 0.51 9.6 8.0 1.5 1 1 0 1 1 1 0 Monopolar spindle protein 2 DMPK_coil PF08826.10 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.3 11.2 10.7 4 7.6 0.5 2.1 1 1 1 2 2 2 0 DMPK coiled coil domain like Macoilin PF09726.9 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.42 9.1 9.7 0.46 9.0 9.7 1.0 1 0 0 1 1 1 0 Macoilin family Atg14 PF10186.9 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.5 9.4 11.4 0.52 9.3 11.4 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 OmpH PF03938.14 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.65 10.3 10.9 0.72 10.2 10.9 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Csm1_N PF18504.1 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.68 10.3 14.1 0.89 9.9 3.9 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF4407 PF14362.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.7 9.2 5.5 0.72 9.2 5.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 0.79 9.5 15.1 5.2 6.9 2.4 2.4 1 1 1 2 2 2 0 Septum formation initiator XRCC4 PF06632.12 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 1.3 7.8 13.9 1.4 7.7 13.9 1.0 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 Spc24 PF08286.11 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 1.4 9.2 10.7 3.1 8.1 4.5 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Cep57_CLD_2 PF14197.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 1.8 8.7 14.4 11 6.2 14.3 2.3 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 DUF4140 PF13600.6 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 3.2 8.2 7.4 20 5.7 7.4 1.9 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) FapA PF03961.13 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 4.2 5.9 10.9 4.3 5.8 10.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A XhlA PF10779.9 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 5 7.4 11.4 10 6.4 1.7 2.1 1 1 1 2 2 2 0 Haemolysin XhlA TMPIT PF07851.13 NODE_72658_length_217_cov_1.884615_g64717_i0reverse_frame_2 - 7 5.8 7.3 7.5 5.7 7.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF4485 PF14846.6 NODE_72657_length_217_cov_1.884615_g64716_i0forward_frame_2 - 0.11 12.5 0.8 0.66 10.1 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4485) TGBp3 PF02495.17 NODE_72653_length_217_cov_1.901099_g64712_i0forward_frame_2 - 0.011 15.3 0.1 0.017 14.8 0.1 1.2 1 0 0 1 1 1 0 Triple gene block 3 DUF1651 PF07864.11 NODE_72652_length_217_cov_1.912088_g64711_i0reverse_frame_3 - 0.092 13.1 0.6 0.23 11.8 0.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1651) Epimerase PF01370.21 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 1.5e-14 54.1 0.0 1.6e-14 54.0 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 1.2e-13 51.1 0.1 1.3e-13 51.1 0.1 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 0.00073 18.8 0.0 0.00079 18.6 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 0.0052 15.8 0.0 0.0052 15.8 0.0 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Gp_dh_N PF00044.24 NODE_72651_length_217_cov_1.923077_g64710_i0forward_frame_3 - 0.043 14.2 0.0 0.05 14.0 0.0 1.2 1 1 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain zf_C2H2_6 PF18450.1 NODE_72649_length_217_cov_1.928571_g64708_i0forward_frame_3 - 0.084 12.6 3.4 0.14 11.9 1.1 2.2 2 0 0 2 2 2 0 Zinc Finger domain Hydrolase_4 PF12146.8 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 1.9e-12 47.0 0.0 2e-12 46.9 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 6e-05 22.8 0.0 6.1e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Ser_hydrolase PF06821.13 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 0.0011 18.8 0.0 0.0012 18.8 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase Abhydrolase_6 PF12697.7 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 0.0067 17.0 0.0 0.0075 16.9 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 NODE_72647_length_217_cov_1.950549_g64706_i0forward_frame_3 - 0.065 13.0 0.0 0.071 12.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Laminin_II PF06009.12 NODE_72646_length_217_cov_1.967033_g64705_i0reverse_frame_3 - 0.032 14.3 5.1 0.037 14.0 5.1 1.0 1 0 0 1 1 1 0 Laminin Domain II Med4 PF10018.9 NODE_72646_length_217_cov_1.967033_g64705_i0reverse_frame_3 - 0.036 13.7 2.4 0.037 13.7 2.4 1.0 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Csm1_N PF18504.1 NODE_72646_length_217_cov_1.967033_g64705_i0reverse_frame_3 - 0.12 12.7 4.9 0.16 12.3 4.8 1.3 1 1 0 1 1 1 0 Csm1 N-terminal domain Defensin_2 PF01097.18 NODE_72646_length_217_cov_1.967033_g64705_i0reverse_frame_2 - 0.094 12.7 3.4 0.094 12.7 3.4 1.6 2 0 0 2 2 2 0 Arthropod defensin ABC_membrane PF00664.23 NODE_72644_length_217_cov_1.972527_g64703_i0reverse_frame_3 - 0.00049 19.8 0.1 0.00056 19.7 0.1 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region ParB_C PF18064.1 NODE_72644_length_217_cov_1.972527_g64703_i0reverse_frame_3 - 0.16 12.2 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Centromere-binding protein ParB C-terminal He_PIG PF05345.12 NODE_72643_length_217_cov_2.005495_g64702_i0reverse_frame_3 - 6e-05 23.2 6.0 0.00025 21.2 0.5 2.4 3 0 0 3 3 3 2 Putative Ig domain Peptidase_C21 PF05381.12 NODE_72643_length_217_cov_2.005495_g64702_i0forward_frame_3 - 0.011 16.1 0.1 0.011 16.0 0.1 1.1 1 0 0 1 1 1 0 Tymovirus endopeptidase DUF1275 PF06912.11 NODE_72642_length_217_cov_2.027473_g64701_i0reverse_frame_3 - 0.0069 16.3 0.4 0.0076 16.2 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Lantibiotic_a PF14867.6 NODE_72642_length_217_cov_2.027473_g64701_i0forward_frame_3 - 0.021 14.6 0.0 0.042 13.6 0.0 1.5 1 0 0 1 1 1 0 Lantibiotic alpha DUF4806 PF16064.5 NODE_72641_length_217_cov_2.032967_g64700_i0forward_frame_3 - 0.11 12.8 1.6 0.13 12.6 1.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4806) DUF2207 PF09972.9 NODE_72636_length_217_cov_2.071429_g64695_i0reverse_frame_3 - 0.56 8.9 3.7 0.65 8.7 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF5442 PF17514.2 NODE_72636_length_217_cov_2.071429_g64695_i0forward_frame_3 - 0.061 13.5 0.1 0.072 13.3 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5442) Kelch_2 PF07646.15 NODE_72635_length_217_cov_2.076923_g64694_i0reverse_frame_3 - 0.017 15.1 0.0 0.47 10.5 0.0 2.1 2 0 0 2 2 2 0 Kelch motif Kelch_1 PF01344.25 NODE_72635_length_217_cov_2.076923_g64694_i0reverse_frame_3 - 0.044 13.4 0.0 0.061 12.9 0.0 1.3 1 0 0 1 1 1 0 Kelch motif BET PF17035.5 NODE_72632_length_217_cov_2.104396_g64691_i0reverse_frame_2 - 0.061 13.5 0.0 0.081 13.1 0.0 1.2 1 0 0 1 1 1 0 Bromodomain extra-terminal - transcription regulation Rdx PF10262.9 NODE_72631_length_217_cov_2.115385_g64690_i0forward_frame_3 - 0.016 15.4 1.0 0.021 15.0 1.0 1.2 1 0 0 1 1 1 0 Rdx family MASE4 PF17158.4 NODE_72630_length_217_cov_2.120879_g64689_i0forward_frame_3 - 2.6e-13 49.8 6.6 2.9e-13 49.6 6.6 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain Lig_chan PF00060.26 NODE_72630_length_217_cov_2.120879_g64689_i0forward_frame_3 - 2.7 7.8 6.1 5.3 6.9 0.1 2.0 1 1 1 2 2 2 0 Ligand-gated ion channel DUF4131 PF13567.6 NODE_72630_length_217_cov_2.120879_g64689_i0forward_frame_3 - 4.2 7.0 5.8 4.4 6.9 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF243 PF03103.17 NODE_72629_length_217_cov_2.120879_g64688_i0forward_frame_3 - 0.071 13.4 0.2 0.078 13.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF243) DUF924 PF06041.11 NODE_72628_length_217_cov_2.120879_g64687_i0forward_frame_2 - 0.014 15.5 0.1 0.016 15.3 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF924) P53_C PF11619.8 NODE_72628_length_217_cov_2.120879_g64687_i0forward_frame_2 - 0.13 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Transcription factor P53 - C terminal domain CTC1_2 PF15491.6 NODE_72625_length_217_cov_2.142857_g64684_i0reverse_frame_3 - 0.047 13.0 0.1 0.047 13.0 0.1 1.0 1 0 0 1 1 1 0 CST, telomere maintenance, complex subunit CTC1 Adipogenin PF15202.6 NODE_72624_length_217_cov_2.164835_g64683_i0forward_frame_3 - 1.1 9.3 8.1 1.4 9.0 8.1 1.3 1 0 0 1 1 1 0 Adipogenin MG1 PF17790.1 NODE_72623_length_217_cov_2.186813_g64682_i0reverse_frame_2 - 0.12 12.8 0.0 0.13 12.7 0.0 1.0 1 0 0 1 1 1 0 Macroglobulin domain MG1 YjbE PF11106.8 NODE_72618_length_217_cov_2.307692_g64677_i0reverse_frame_3 - 0.0021 18.2 0.3 0.0025 18.0 0.3 1.1 1 0 0 1 1 1 1 Exopolysaccharide production protein YjbE DUF5392 PF17370.2 NODE_72617_length_217_cov_2.340659_g64676_i0reverse_frame_3 - 0.21 11.6 3.1 0.22 11.6 3.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5392) RPN1_RPN2_N PF17781.1 NODE_72617_length_217_cov_2.340659_g64676_i0forward_frame_3 - 0.012 15.0 0.3 0.013 14.9 0.3 1.0 1 0 0 1 1 1 0 RPN1/RPN2 N-terminal domain HALZ PF02183.18 NODE_72617_length_217_cov_2.340659_g64676_i0forward_frame_3 - 0.037 14.3 0.6 0.049 13.9 0.6 1.3 1 0 0 1 1 1 0 Homeobox associated leucine zipper Heliorhodopsin PF18761.1 NODE_72616_length_217_cov_2.368132_g64675_i0forward_frame_2 - 0.039 13.3 0.1 0.043 13.1 0.1 1.1 1 0 0 1 1 1 0 Heliorhodopsin Guanylate_cyc_2 PF09778.9 NODE_72615_length_217_cov_2.373626_g64674_i0forward_frame_3 - 0.057 12.8 0.1 0.058 12.8 0.1 1.0 1 0 0 1 1 1 0 Guanylylate cyclase UPF0556 PF10572.9 NODE_72610_length_217_cov_2.406593_g64669_i0forward_frame_3 - 0.055 13.0 0.0 0.059 12.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0556 ANTH PF07651.16 NODE_72610_length_217_cov_2.406593_g64669_i0forward_frame_3 - 0.074 12.0 0.0 0.074 12.0 0.0 1.0 1 0 0 1 1 1 0 ANTH domain Thymidylate_kin PF02223.17 NODE_72609_length_217_cov_2.417582_g64668_i0forward_frame_3 - 1.3e-14 54.3 0.0 1.3e-14 54.3 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase Rapsyn_N PF10579.9 NODE_72609_length_217_cov_2.417582_g64668_i0forward_frame_2 - 0.045 13.8 0.0 0.063 13.4 0.0 1.2 1 0 0 1 1 1 0 Rapsyn N-terminal myristoylation and linker region ALG3 PF05208.13 NODE_72606_length_217_cov_2.483516_g64665_i0forward_frame_3 - 8e-10 38.7 3.7 8.5e-10 38.6 3.7 1.0 1 0 0 1 1 1 1 ALG3 protein Babuvirus_MP PF07234.11 NODE_72606_length_217_cov_2.483516_g64665_i0forward_frame_3 - 1.1 9.4 4.2 0.33 11.1 0.7 1.7 1 1 1 2 2 2 0 Movement and RNA silencing protein TSSC4 PF15264.6 NODE_72604_length_217_cov_2.516484_g64663_i0reverse_frame_3 - 0.062 13.6 0.3 0.09 13.0 0.3 1.2 1 0 0 1 1 1 0 Tumour suppressing sub-chromosomal transferable candidate 4 Rhodanese PF00581.20 NODE_72603_length_217_cov_2.521978_g64662_i0reverse_frame_2 - 0.00065 20.2 0.0 0.00076 20.0 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain Sp38 PF07354.12 NODE_72601_length_217_cov_2.549451_g64660_i0forward_frame_3 - 0.0066 15.9 0.3 0.0073 15.8 0.3 1.0 1 0 0 1 1 1 1 Zona-pellucida-binding protein (Sp38) Keratin_B2 PF01500.17 NODE_72600_length_217_cov_2.554945_g64659_i0reverse_frame_3 - 0.014 15.4 2.0 0.017 15.1 2.0 1.0 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein NP1-WLL PF11733.8 NODE_72599_length_217_cov_2.604396_g64658_i0reverse_frame_2 - 0.061 13.1 0.3 0.066 13.0 0.3 1.0 1 0 0 1 1 1 0 Non-capsid protein NP1 WD40 PF00400.32 NODE_72598_length_217_cov_2.615385_g64657_i0forward_frame_3 - 7.7e-05 23.4 0.1 0.00046 20.9 0.0 2.1 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_72598_length_217_cov_2.615385_g64657_i0forward_frame_3 - 0.0019 18.4 0.0 0.0021 18.3 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 NODE_72598_length_217_cov_2.615385_g64657_i0forward_frame_3 - 0.0041 16.5 0.0 0.0048 16.3 0.0 1.1 1 0 0 1 1 1 1 WD40-like domain Cytochrom_D1 PF02239.16 NODE_72598_length_217_cov_2.615385_g64657_i0forward_frame_3 - 0.082 11.4 0.0 0.082 11.4 0.0 1.0 1 0 0 1 1 1 0 Cytochrome D1 heme domain MAM PF00629.23 NODE_72597_length_217_cov_2.620879_g64656_i0forward_frame_2 - 0.16 11.9 0.1 0.16 11.9 0.1 1.1 1 0 0 1 1 1 0 MAM domain, meprin/A5/mu # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks374.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks374.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks374.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks374.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-RING_10 PF16685.5 NODE_72595_length_217_cov_2.626374_g64654_i0reverse_frame_2 - 0.51 10.5 4.4 2.9 8.1 0.4 2.0 1 1 1 2 2 2 0 zinc RING finger of MSL2 EMG1 PF03587.14 NODE_72595_length_217_cov_2.626374_g64654_i0forward_frame_3 - 0.05 13.3 0.0 0.076 12.7 0.0 1.2 1 0 0 1 1 1 0 EMG1/NEP1 methyltransferase TOH_N PF12549.8 NODE_72594_length_217_cov_2.681319_g64653_i0forward_frame_3 - 0.64 9.9 0.1 0.64 9.9 0.1 2.0 3 0 0 3 3 3 0 Tyrosine hydroxylase N terminal DUF2947 PF11163.8 NODE_72592_length_217_cov_2.747253_g64651_i0reverse_frame_3 - 0.042 13.7 0.2 0.046 13.6 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2947) PIP5K PF01504.18 NODE_72591_length_217_cov_2.763736_g64650_i0reverse_frame_3 - 0.013 14.7 0.1 0.013 14.7 0.1 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-4-phosphate 5-Kinase RACo_linker PF17650.1 NODE_72586_length_217_cov_2.851648_g64645_i0reverse_frame_2 - 0.035 14.0 0.0 0.041 13.7 0.0 1.1 1 0 0 1 1 1 0 RACo linker region SR-25 PF10500.9 NODE_72585_length_217_cov_2.868132_g64644_i0reverse_frame_3 - 0.57 9.8 5.8 0.61 9.7 5.8 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein ATP1G1_PLM_MAT8 PF02038.16 NODE_72584_length_217_cov_2.868132_g64643_i0reverse_frame_3 - 0.13 11.7 0.9 2 7.9 0.0 2.2 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family Sigma70_r4 PF04545.16 NODE_72584_length_217_cov_2.868132_g64643_i0forward_frame_2 - 0.045 13.3 0.0 0.1 12.2 0.0 1.6 2 0 0 2 2 2 0 Sigma-70, region 4 DUF1664 PF07889.12 NODE_72583_length_217_cov_2.961538_g64642_i0reverse_frame_3 - 0.11 12.5 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Caskin-tail PF16632.5 NODE_72583_length_217_cov_2.961538_g64642_i0reverse_frame_2 - 0.23 11.9 1.4 0.36 11.3 1.4 1.3 1 0 0 1 1 1 0 C-terminal region of Caskin DUF326 PF03860.16 NODE_72583_length_217_cov_2.961538_g64642_i0forward_frame_2 - 0.0042 17.0 0.0 3.6 7.7 0.1 2.7 2 1 0 2 2 2 2 Domain of Unknown Function (DUF326) FCH PF00611.23 NODE_72583_length_217_cov_2.961538_g64642_i0forward_frame_2 - 0.013 15.8 0.2 0.37 11.1 0.3 2.0 1 1 1 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain Mtp PF03821.16 NODE_72583_length_217_cov_2.961538_g64642_i0forward_frame_2 - 0.055 13.1 1.4 0.11 12.1 1.4 1.6 1 1 0 1 1 1 0 Golgi 4-transmembrane spanning transporter Kinesin PF00225.23 NODE_72582_length_217_cov_2.961538_g64641_i0forward_frame_2 - 1.5e-26 93.1 0.0 1.6e-26 93.0 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain HlyD_D23 PF16576.5 NODE_72581_length_217_cov_3.016484_g64640_i0reverse_frame_2 - 0.002 17.4 0.0 0.0027 17.0 0.0 1.2 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion VWA_3_C PF18571.1 NODE_72581_length_217_cov_3.016484_g64640_i0reverse_frame_2 - 0.08 12.8 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 von Willebrand factor type A C-terminal domain DUF2238 PF09997.9 NODE_72580_length_217_cov_3.054945_g64639_i0reverse_frame_3 - 0.15 11.9 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2238) NAGLU PF05089.12 NODE_72579_length_217_cov_3.098901_g64638_i0reverse_frame_2 - 0.065 12.2 0.0 0.068 12.1 0.0 1.0 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain Pescadillo_N PF06732.11 NODE_72577_length_217_cov_3.247253_g64636_i0forward_frame_2 - 0.01 15.4 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 0 Pescadillo N-terminus DiSB-ORF2_chro PF16506.5 NODE_72576_length_217_cov_3.318681_g64635_i0forward_frame_2 - 0.043 13.8 0.6 0.076 13.0 0.6 1.4 1 0 0 1 1 1 0 Putative virion glycoprotein of insect viruses RCC1 PF00415.18 NODE_72573_length_217_cov_3.340659_g64632_i0forward_frame_3 - 0.0019 18.8 0.0 0.0026 18.3 0.0 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Ig_5 PF16681.5 NODE_72572_length_217_cov_3.351648_g64631_i0reverse_frame_3 - 0.081 13.3 0.7 2.6 8.5 0.2 2.0 1 1 1 2 2 2 0 Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain Methyltransf_FA PF12248.8 NODE_72572_length_217_cov_3.351648_g64631_i0forward_frame_2 - 0.074 13.4 0.0 0.1 12.9 0.0 1.3 1 1 0 1 1 1 0 Farnesoic acid 0-methyl transferase BTK PF00779.19 NODE_72570_length_217_cov_3.461538_g64629_i0reverse_frame_3 - 0.048 13.5 0.2 0.048 13.5 0.2 2.2 2 0 0 2 2 2 0 BTK motif Methyltransf_25 PF13649.6 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 1.9e-10 41.3 0.2 2.9e-10 40.7 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 1.1e-08 35.0 0.1 1.3e-08 34.7 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 7e-08 32.5 0.0 7.9e-08 32.3 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 1e-06 29.3 0.1 1.8e-06 28.5 0.1 1.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 1.9e-05 25.3 0.1 2.4e-05 25.0 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 5.7e-05 22.6 0.1 6e-05 22.5 0.1 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_15 PF09445.10 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.00015 21.4 0.0 0.00016 21.3 0.0 1.0 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_18 PF12847.7 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.00023 21.1 0.0 0.00026 20.9 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.00025 20.7 0.1 0.00025 20.7 0.1 1.0 1 0 0 1 1 1 1 Methyltransferase small domain TPMT PF05724.11 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.0016 18.2 0.0 0.0016 18.2 0.0 1.0 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) DREV PF05219.12 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.0026 16.9 0.0 0.0027 16.8 0.0 1.0 1 0 0 1 1 1 1 DREV methyltransferase CMAS PF02353.20 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.0033 16.8 0.1 0.0036 16.6 0.1 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.0094 15.9 0.0 0.0098 15.9 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain UDPG_MGDP_dh_N PF03721.14 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.014 15.0 0.0 0.016 14.7 0.0 1.1 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.088 12.7 0.1 0.095 12.6 0.1 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH_RFF PF18321.1 NODE_72569_length_217_cov_3.472527_g64628_i0reverse_frame_2 - 0.094 13.2 0.1 0.15 12.5 0.1 1.4 1 0 0 1 1 1 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LEM PF03020.15 NODE_72569_length_217_cov_3.472527_g64628_i0forward_frame_2 - 0.33 10.5 0.5 0.59 9.7 0.1 1.6 1 1 0 1 1 1 0 LEM domain NADHdh PF00146.21 NODE_72565_length_217_cov_4.043956_g64624_i0reverse_frame_2 - 2.5e-06 27.0 0.1 2.5e-06 27.0 0.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase YCF90 PF17088.5 NODE_72563_length_217_cov_4.950549_g64622_i0forward_frame_2 - 0.013 14.8 2.4 0.015 14.7 2.4 1.0 1 0 0 1 1 1 0 Uncharacterised protein family PsiB PF06290.11 NODE_72562_length_217_cov_5.351648_g64621_i0forward_frame_2 - 0.088 12.3 0.1 0.11 12.0 0.1 1.1 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) RuBisCO_large_N PF02788.16 NODE_72560_length_217_cov_5.824176_g64619_i0reverse_frame_3 - 3.8e-19 69.0 0.1 4.2e-19 68.9 0.1 1.0 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain DUF1856 PF08983.10 NODE_72559_length_217_cov_8.906593_g64618_i0forward_frame_3 - 0.029 14.6 0.3 0.04 14.2 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1856) HP1451_C PF18472.1 NODE_72559_length_217_cov_8.906593_g64618_i0forward_frame_2 - 0.11 12.5 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 HP1451 C-terminal domain LacY_symp PF01306.19 NODE_72557_length_217_cov_22.285714_g64616_i0reverse_frame_2 - 0.096 11.4 0.5 0.11 11.3 0.5 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter Fer4_3 PF12798.7 NODE_72550_length_217_cov_28.939560_g64609_i0forward_frame_2 - 0.41 11.7 4.7 8.4 7.6 0.9 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain PAN_4 PF14295.6 NODE_72549_length_217_cov_30.186813_g64608_i0forward_frame_3 - 0.04 13.8 0.4 0.055 13.4 0.4 1.2 1 0 0 1 1 1 0 PAN domain CLN3 PF02487.17 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 2.4 7.1 6.9 2.4 7.1 6.9 1.0 1 0 0 1 1 1 0 CLN3 protein Connexin PF00029.19 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 3.8 7.2 13.1 3.9 7.2 13.1 1.1 1 0 0 1 1 1 0 Connexin CobT PF06213.12 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 4.1 6.7 12.1 4.3 6.7 12.1 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Coilin_N PF15862.5 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 4.6 7.0 25.4 6.9 6.5 25.4 1.2 1 0 0 1 1 1 0 Coilin N-terminus DUF4228 PF14009.6 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 4.9 7.5 10.4 5.5 7.3 10.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4228) Afi1 PF07792.12 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 7 7.1 14.7 8 7.0 14.7 1.1 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking Zip PF02535.22 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 7.8 5.6 10.1 8.1 5.6 10.1 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF2201_N PF13203.6 NODE_72548_length_217_cov_30.758242_g64607_i0forward_frame_3 - 8.5 5.9 8.7 9.5 5.7 8.7 1.0 1 0 0 1 1 1 0 Putative metallopeptidase domain MTHFR_C PF12225.8 NODE_72545_length_217_cov_34.697802_g64604_i0reverse_frame_2 - 0.0068 16.0 1.2 0.0081 15.8 1.2 1.2 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal PknG_rubred PF16919.5 NODE_72545_length_217_cov_34.697802_g64604_i0forward_frame_3 - 0.062 13.5 1.9 0.082 13.1 1.9 1.1 1 0 0 1 1 1 0 Protein kinase G rubredoxin domain 2OG-FeII_Oxy_3 PF13640.6 NODE_72543_length_217_cov_37.609890_g64602_i0forward_frame_2 - 0.041 14.8 0.0 0.059 14.3 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily SAD_SRA PF02182.17 NODE_72540_length_217_cov_39.252747_g64599_i0reverse_frame_3 - 0.27 10.9 5.6 0.29 10.8 5.6 1.1 1 0 0 1 1 1 0 SAD/SRA domain ERG2_Sigma1R PF04622.12 NODE_72540_length_217_cov_39.252747_g64599_i0reverse_frame_3 - 0.28 10.5 2.8 0.32 10.3 2.8 1.0 1 0 0 1 1 1 0 ERG2 and Sigma1 receptor like protein DUF4775 PF16001.5 NODE_72540_length_217_cov_39.252747_g64599_i0reverse_frame_3 - 7.3 5.9 18.1 8.3 5.7 18.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4775) Psu PF07455.11 NODE_72536_length_217_cov_40.934066_g64595_i0reverse_frame_3 - 0.087 12.4 0.0 0.091 12.3 0.0 1.1 1 0 0 1 1 1 0 Phage polarity suppression protein (Psu) MTHFR_C PF12225.8 NODE_72532_length_217_cov_42.758242_g64591_i0forward_frame_3 - 0.0063 16.1 7.3 0.008 15.8 7.3 1.3 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal KRAP_IP3R_bind PF14722.6 NODE_72529_length_217_cov_48.000000_g64588_i0reverse_frame_2 - 0.06 13.1 0.5 0.063 13.0 0.5 1.0 1 0 0 1 1 1 0 Ki-ras-induced actin-interacting protein-IP3R-interacting domain IER PF05760.12 NODE_72524_length_217_cov_50.972527_g64583_i0forward_frame_2 - 0.026 14.8 1.7 0.027 14.8 1.7 1.0 1 0 0 1 1 1 0 Immediate early response protein (IER) zf-RING-like PF08746.11 NODE_72524_length_217_cov_50.972527_g64583_i0forward_frame_2 - 1.4 9.3 11.6 0.84 10.0 7.6 2.0 1 1 1 2 2 2 0 RING-like domain DUF4358 PF14270.6 NODE_72523_length_217_cov_51.835165_g64582_i0reverse_frame_2 - 0.032 14.5 0.4 0.038 14.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4358) RSN1_TM PF13967.6 NODE_72522_length_217_cov_52.532967_g64581_i0forward_frame_2 - 2.3 8.0 7.3 0.29 10.9 1.3 1.9 1 1 1 2 2 2 0 Late exocytosis, associated with Golgi transport Plasmid_stab_B PF10784.9 NODE_72520_length_217_cov_54.813187_g64579_i0reverse_frame_3 - 0.11 12.4 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Plasmid stability protein efb-c PF12199.8 NODE_72520_length_217_cov_54.813187_g64579_i0reverse_frame_2 - 0.038 14.0 2.0 0.052 13.6 2.0 1.3 1 0 0 1 1 1 0 Extracellular fibrinogen binding protein C terminal DUF3332 PF11810.8 NODE_72517_length_217_cov_57.335165_g64576_i0reverse_frame_2 - 0.91 9.1 5.7 0.97 9.0 5.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) STAG PF08514.11 NODE_72515_length_217_cov_58.307692_g64574_i0reverse_frame_2 - 0.072 13.0 2.0 0.14 12.1 2.0 1.4 1 1 0 1 1 1 0 STAG domain SLC3A2_N PF16028.5 NODE_72515_length_217_cov_58.307692_g64574_i0forward_frame_2 - 0.08 12.5 0.3 0.11 12.0 0.3 1.2 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Zn_Tnp_IS91 PF14319.6 NODE_72514_length_217_cov_60.807692_g64573_i0forward_frame_3 - 0.0029 17.6 0.2 0.0045 17.0 0.2 1.2 1 0 0 1 1 1 1 Transposase zinc-binding domain DUF1980 PF09323.10 NODE_72514_length_217_cov_60.807692_g64573_i0forward_frame_2 - 0.26 11.2 0.4 0.29 11.0 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) SVWC PF15430.6 NODE_72512_length_217_cov_69.835165_g64571_i0reverse_frame_2 - 0.22 11.8 6.4 0.38 11.1 6.4 1.4 1 1 0 1 1 1 0 Single domain von Willebrand factor type C DUF4668 PF15701.5 NODE_72511_length_217_cov_70.186813_g64570_i0forward_frame_3 - 0.14 12.0 1.1 0.17 11.7 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) HTH_50 PF18024.1 NODE_72510_length_217_cov_70.736264_g64569_i0reverse_frame_2 - 0.041 13.5 1.9 6.1 6.5 0.2 3.0 2 1 0 2 2 2 0 Helix-turn-helix domain DUF899 PF05988.12 NODE_72508_length_217_cov_75.901099_g64567_i0reverse_frame_2 - 0.011 15.3 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) Nucleotid_trans PF03407.16 NODE_72507_length_217_cov_75.972527_g64566_i0reverse_frame_3 - 2.9e-05 24.1 0.1 3.7e-05 23.8 0.1 1.3 1 1 0 1 1 1 1 Nucleotide-diphospho-sugar transferase Dickkopf_N PF04706.12 NODE_72496_length_217_cov_125.302198_g64555_i0reverse_frame_3 - 2.3 8.8 16.5 5.3 7.6 2.3 2.1 1 1 1 2 2 2 0 Dickkopf N-terminal cysteine-rich region DUF2642 PF10842.8 NODE_72495_length_217_cov_142.115385_g64554_i0reverse_frame_3 - 0.25 11.2 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2642) Calsarcin PF05556.11 NODE_72494_length_217_cov_154.225275_g64553_i0reverse_frame_3 - 0.11 12.1 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Calcineurin-binding protein (Calsarcin) CBM_15 PF03426.14 NODE_72485_length_217_cov_451.890110_g64544_i0reverse_frame_2 - 0.14 11.7 0.1 0.16 11.5 0.1 1.1 1 0 0 1 1 1 0 Carbohydrate binding domain (family 15) PWWP PF00855.17 NODE_72482_length_218_cov_0.797814_g64541_i0forward_frame_3 - 0.13 12.7 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 PWWP domain FKBP_N_2 PF18023.1 NODE_72481_length_218_cov_0.846995_g64540_i0reverse_frame_3 - 0.035 14.2 0.0 0.038 14.1 0.0 1.1 1 0 0 1 1 1 0 BDBT FKBP like N-terminal DUF1194 PF06707.11 NODE_72472_length_218_cov_0.874317_g64531_i0reverse_frame_3 - 0.12 11.6 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1194) CAP_N PF01213.19 NODE_72471_length_218_cov_0.874317_g64530_i0forward_frame_3 - 0.22 10.9 10.1 0.23 10.9 10.1 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_72471_length_218_cov_0.874317_g64530_i0forward_frame_3 - 2.1 8.3 9.2 2.2 8.3 9.2 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator Phageshock_PspD PF09584.10 NODE_72468_length_218_cov_0.874317_g64527_i0reverse_frame_2 - 0.034 14.2 0.2 0.055 13.5 0.2 1.4 1 1 0 1 1 1 0 Phage shock protein PspD (Phageshock_PspD) PPE PF00823.19 NODE_72467_length_218_cov_0.874317_g64526_i0forward_frame_3 - 0.023 14.8 0.0 0.029 14.5 0.0 1.0 1 0 0 1 1 1 0 PPE family INCENP_ARK-bind PF03941.15 NODE_72465_length_218_cov_0.874317_g64524_i0reverse_frame_2 - 0.12 12.3 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Inner centromere protein, ARK binding region Sortase PF04203.13 NODE_72457_length_218_cov_0.989071_g64516_i0forward_frame_3 - 0.14 12.0 0.2 0.14 12.0 0.2 1.1 1 0 0 1 1 1 0 Sortase domain DUF2793 PF10983.8 NODE_72455_length_218_cov_1.010929_g64514_i0reverse_frame_2 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2793) MTBP_C PF14920.6 NODE_72455_length_218_cov_1.010929_g64514_i0forward_frame_3 - 0.087 12.6 0.1 0.1 12.4 0.1 1.0 1 0 0 1 1 1 0 MDM2-binding Kelch_4 PF13418.6 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 6e-13 48.6 1.6 2.2e-05 24.4 0.1 2.0 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 3.7e-11 42.8 0.1 3.2e-08 33.4 0.0 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 1.3e-10 41.2 0.3 0.00017 21.7 0.0 2.1 1 1 1 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 8.4e-10 38.7 1.2 0.00039 20.6 0.0 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 1.1e-08 34.5 0.1 0.00025 20.5 0.0 2.2 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 NODE_72454_length_218_cov_1.027322_g64513_i0forward_frame_3 - 3.4e-07 30.0 0.4 0.00036 20.4 0.1 2.2 2 0 0 2 2 2 2 Kelch motif Synapsin_N PF10581.9 NODE_72447_length_218_cov_1.087432_g64506_i0forward_frame_3 - 0.13 12.3 0.1 2.8 8.0 0.0 2.1 2 0 0 2 2 2 0 Synapsin N-terminal zf-CSL PF05207.13 NODE_72444_length_218_cov_1.142077_g64503_i0reverse_frame_2 - 1.2 8.9 4.6 8.2 6.2 4.6 2.1 1 1 0 1 1 1 0 CSL zinc finger DnaB_2 PF07261.11 NODE_72444_length_218_cov_1.142077_g64503_i0forward_frame_2 - 0.11 12.3 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Replication initiation and membrane attachment RhoGAP-FF1 PF16512.5 NODE_72437_length_218_cov_1.213115_g64496_i0reverse_frame_2 - 0.05 14.3 0.0 0.063 14.0 0.0 1.1 1 0 0 1 1 1 0 p190-A and -B Rho GAPs FF domain GerD PF17898.1 NODE_72437_length_218_cov_1.213115_g64496_i0reverse_frame_2 - 0.1 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Spore germination GerD central core domain T4_deiodinase PF00837.17 NODE_72435_length_218_cov_1.224044_g64494_i0forward_frame_3 - 0.093 12.0 0.0 0.099 11.9 0.0 1.1 1 0 0 1 1 1 0 Iodothyronine deiodinase DUF5310 PF17237.2 NODE_72433_length_218_cov_1.245902_g64492_i0reverse_frame_3 - 0.088 12.7 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5310) MOZ_SAS PF01853.18 NODE_72429_length_218_cov_1.278689_g64488_i0reverse_frame_3 - 1.4e-08 34.7 0.2 1.6e-08 34.5 0.2 1.1 1 0 0 1 1 1 1 MOZ/SAS family Hat1_N PF10394.9 NODE_72429_length_218_cov_1.278689_g64488_i0reverse_frame_3 - 0.00062 20.0 0.0 0.00069 19.9 0.0 1.1 1 0 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus DUF3085 PF11284.8 NODE_72428_length_218_cov_1.278689_g64487_i0reverse_frame_2 - 0.037 14.3 0.1 0.039 14.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3085) ExoD PF06055.12 NODE_72428_length_218_cov_1.278689_g64487_i0forward_frame_2 - 0.079 12.3 3.2 0.089 12.2 3.2 1.1 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD Ribosomal_L37ae PF01780.19 NODE_72425_length_218_cov_1.295082_g64484_i0reverse_frame_3 - 0.18 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal L37ae protein family DUF3511 PF12023.8 NODE_72425_length_218_cov_1.295082_g64484_i0reverse_frame_3 - 0.19 11.6 0.1 0.25 11.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3511) Phage_holin_T PF11031.8 NODE_72417_length_218_cov_1.300546_g64476_i0reverse_frame_3 - 0.064 12.7 0.6 0.071 12.6 0.6 1.0 1 0 0 1 1 1 0 Bacteriophage T holin FAM165 PF14981.6 NODE_72416_length_218_cov_1.300546_g64475_i0reverse_frame_2 - 0.0076 16.0 0.1 0.01 15.6 0.1 1.3 1 0 0 1 1 1 1 FAM165 family HECT_2 PF09814.9 NODE_72414_length_218_cov_1.306011_g64473_i0reverse_frame_2 - 0.26 10.1 6.4 0.26 10.1 6.4 1.1 1 0 0 1 1 1 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding SelP_N PF04592.14 NODE_72414_length_218_cov_1.306011_g64473_i0reverse_frame_2 - 7.5 5.9 13.5 8.5 5.7 13.5 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region SdpI PF13630.6 NODE_72414_length_218_cov_1.306011_g64473_i0forward_frame_2 - 0.99 9.6 6.4 1.3 9.2 6.4 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF5592 PF17332.2 NODE_72414_length_218_cov_1.306011_g64473_i0forward_frame_2 - 1.1 9.8 7.7 1.4 9.6 7.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5592) Myotoxins PF00819.17 NODE_72412_length_218_cov_1.306011_g64471_i0forward_frame_3 - 0.081 13.2 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 Myotoxin, crotamine DUF1738 PF08401.11 NODE_72411_length_218_cov_1.306011_g64470_i0reverse_frame_3 - 0.15 12.1 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1738) SGTA_dimer PF16546.5 NODE_72411_length_218_cov_1.306011_g64470_i0forward_frame_3 - 0.18 11.6 0.1 0.74 9.6 0.0 1.8 2 0 0 2 2 2 0 Homodimerisation domain of SGTA Pox_A8 PF04745.12 NODE_72405_length_218_cov_1.311475_g64464_i0forward_frame_3 - 0.03 13.4 0.3 0.033 13.2 0.3 1.0 1 0 0 1 1 1 0 VITF-3 subunit protein Chitin_synth_2 PF03142.15 NODE_72405_length_218_cov_1.311475_g64464_i0forward_frame_3 - 0.058 12.0 0.2 0.066 11.8 0.2 1.1 1 0 0 1 1 1 0 Chitin synthase MHB PF16525.5 NODE_72405_length_218_cov_1.311475_g64464_i0forward_frame_3 - 0.06 13.6 0.0 1.1 9.6 0.1 2.0 2 0 0 2 2 2 0 Haemophore, haem-binding zinc_ribbon_12 PF11331.8 NODE_72401_length_218_cov_1.311475_g64460_i0forward_frame_2 - 0.015 15.1 1.4 0.97 9.3 0.3 2.1 2 0 0 2 2 2 0 Probable zinc-ribbon domain DnaJ_CXXCXGXG PF00684.19 NODE_72400_length_218_cov_1.311475_g64459_i0forward_frame_3 - 0.0069 16.7 0.5 0.0082 16.5 0.5 1.1 1 0 0 1 1 1 1 DnaJ central domain zf-RanBP PF00641.18 NODE_72400_length_218_cov_1.311475_g64459_i0forward_frame_3 - 0.012 14.9 0.2 0.019 14.3 0.2 1.4 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DUF4661 PF15576.6 NODE_72397_length_218_cov_1.311475_g64456_i0reverse_frame_3 - 0.16 11.9 0.3 0.19 11.6 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) ANP PF00212.18 NODE_72396_length_218_cov_1.311475_g64455_i0forward_frame_3 - 0.092 12.9 3.4 0.092 12.9 3.4 2.4 2 1 0 2 2 2 0 Atrial natriuretic peptide DUF4630 PF15443.6 NODE_72396_length_218_cov_1.311475_g64455_i0forward_frame_2 - 0.066 13.4 0.1 0.071 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4630) Kinocilin PF15033.6 NODE_72395_length_218_cov_1.311475_g64454_i0forward_frame_3 - 0.056 13.1 0.3 0.065 12.9 0.3 1.1 1 0 0 1 1 1 0 Kinocilin protein SWIM PF04434.17 NODE_72395_length_218_cov_1.311475_g64454_i0forward_frame_2 - 0.46 10.2 0.3 0.46 10.2 0.3 2.3 2 0 0 2 2 2 0 SWIM zinc finger DUF4367 PF14285.6 NODE_72391_length_218_cov_1.333333_g64450_i0reverse_frame_2 - 0.051 14.0 0.2 0.052 14.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4367) CDC73_C PF05179.14 NODE_72388_length_218_cov_1.377049_g64447_i0reverse_frame_3 - 0.063 13.0 0.4 0.065 12.9 0.4 1.1 1 0 0 1 1 1 0 RNA pol II accessory factor, Cdc73 family, C-terminal UvrC_HhH_N PF08459.11 NODE_72385_length_218_cov_1.382514_g64444_i0reverse_frame_3 - 4.8e-11 42.8 0.0 7.2e-11 42.2 0.0 1.2 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal Kdo_hydroxy PF11004.8 NODE_72385_length_218_cov_1.382514_g64444_i0reverse_frame_3 - 0.022 14.0 0.1 0.026 13.8 0.1 1.0 1 0 0 1 1 1 0 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase PIF PF05092.12 NODE_72385_length_218_cov_1.382514_g64444_i0reverse_frame_3 - 0.047 12.4 0.1 0.05 12.3 0.1 1.0 1 0 0 1 1 1 0 Per os infectivity SNAD4 PF18750.1 NODE_72385_length_218_cov_1.382514_g64444_i0reverse_frame_2 - 0.22 11.7 2.6 0.28 11.3 2.6 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 Ripply PF14998.6 NODE_72385_length_218_cov_1.382514_g64444_i0forward_frame_3 - 0.017 15.8 0.2 0.02 15.5 0.2 1.1 1 0 0 1 1 1 0 Transcription Regulator DUF4939 PF16297.5 NODE_72385_length_218_cov_1.382514_g64444_i0forward_frame_3 - 0.032 14.1 0.0 0.033 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4939) DUF4792 PF16040.5 NODE_72384_length_218_cov_1.393443_g64443_i0forward_frame_2 - 0.086 12.8 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4792) zf-PHD-like PF15446.6 NODE_72380_length_218_cov_1.409836_g64439_i0reverse_frame_3 - 0.15 11.7 2.6 0.17 11.5 2.6 1.1 1 0 0 1 1 1 0 PHD/FYVE-zinc-finger like domain AMH_N PF04709.12 NODE_72378_length_218_cov_1.437158_g64437_i0forward_frame_3 - 0.00022 20.3 0.2 0.00023 20.2 0.2 1.0 1 0 0 1 1 1 1 Anti-Mullerian hormone, N terminal region TPP_enzyme_C PF02775.21 NODE_72375_length_218_cov_1.475410_g64434_i0reverse_frame_2 - 0.0012 18.6 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Shisa PF13908.6 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 5.9e-05 23.4 7.2 6.9e-05 23.2 7.2 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator EphA2_TM PF14575.6 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 0.013 16.3 0.3 0.016 16.0 0.3 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Afaf PF15339.6 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 0.028 14.2 0.0 0.028 14.1 0.0 1.0 1 0 0 1 1 1 0 Acrosome formation-associated factor Protocadherin PF08374.11 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 0.033 14.2 0.0 0.035 14.1 0.0 1.2 1 0 0 1 1 1 0 Protocadherin Prominin PF05478.11 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 0.13 10.2 17.3 0.15 10.0 17.3 1.0 1 0 0 1 1 1 0 Prominin TMEM132D_C PF15706.5 NODE_72373_length_218_cov_1.475410_g64432_i0reverse_frame_3 - 0.21 11.4 2.4 0.24 11.2 2.4 1.1 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF3674 PF12426.8 NODE_72373_length_218_cov_1.475410_g64432_i0forward_frame_3 - 0.023 14.7 0.1 0.033 14.2 0.1 1.3 1 0 0 1 1 1 0 RNA dependent RNA polymerase Tlr3_TMD PF17968.1 NODE_72371_length_218_cov_1.497268_g64430_i0reverse_frame_3 - 0.024 14.8 2.7 0.27 11.5 0.0 2.3 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain DUF722 PF05263.11 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_3 - 0.03 14.6 0.7 0.03 14.5 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF722) Pkinase PF00069.25 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 6.7e-15 55.2 0.2 6.8e-15 55.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 9.7e-06 25.0 0.0 1e-05 25.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.0081 15.8 0.1 0.0087 15.7 0.1 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.028 13.4 0.0 0.032 13.2 0.0 1.0 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.047 13.0 0.0 0.047 13.0 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family CDC4_D PF16856.5 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.12 12.2 0.0 0.35 10.8 0.0 1.7 1 1 0 1 1 1 0 Cell division control protein 4 dimerisation domain APH PF01636.23 NODE_72371_length_218_cov_1.497268_g64430_i0forward_frame_2 - 0.16 11.8 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family Herpes_UL17 PF04559.12 NODE_72369_length_218_cov_1.497268_g64428_i0reverse_frame_3 - 0.052 12.4 0.1 0.057 12.2 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus UL17 protein LppC PF04348.13 NODE_72366_length_218_cov_1.519126_g64425_i0reverse_frame_3 - 0.22 10.3 0.0 0.25 10.1 0.0 1.0 1 0 0 1 1 1 0 LppC putative lipoprotein SMRP1 PF15181.6 NODE_72363_length_218_cov_1.524590_g64422_i0forward_frame_3 - 0.064 12.8 1.0 0.068 12.8 1.0 1.1 1 0 0 1 1 1 0 Spermatid-specific manchette-related protein 1 CheY-binding PF09078.11 NODE_72362_length_218_cov_1.524590_g64421_i0forward_frame_2 - 0.29 11.3 0.0 0.29 11.3 0.0 1.8 2 0 0 2 2 2 0 CheY binding Phospholamban PF04272.14 NODE_72361_length_218_cov_1.530055_g64420_i0forward_frame_2 - 0.044 13.2 3.5 0.069 12.6 3.5 1.3 1 0 0 1 1 1 0 Phospholamban tRNA_int_end_N2 PF12928.7 NODE_72358_length_218_cov_1.530055_g64417_i0forward_frame_3 - 0.19 11.9 0.3 17 5.7 0.1 2.1 2 0 0 2 2 2 0 tRNA-splicing endonuclease subunit sen54 N-term C_LFY_FLO PF17538.2 NODE_72357_length_218_cov_1.530055_g64416_i0reverse_frame_3 - 0.019 14.5 0.1 0.022 14.2 0.1 1.1 1 0 0 1 1 1 0 DNA Binding Domain (C-terminal) Leafy/Floricaula Annexin_like PF18411.1 NODE_72357_length_218_cov_1.530055_g64416_i0forward_frame_3 - 0.055 13.7 0.0 0.061 13.6 0.0 1.2 1 0 0 1 1 1 0 Annexin-like domain zf-RING_2 PF13639.6 NODE_72356_length_218_cov_1.530055_g64415_i0forward_frame_3 - 0.0016 18.7 14.0 0.0016 18.7 14.0 1.8 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 NODE_72356_length_218_cov_1.530055_g64415_i0forward_frame_3 - 0.0026 17.4 5.0 0.0026 17.4 5.0 1.9 2 0 0 2 2 2 1 RING-like zinc finger C1_1 PF00130.22 NODE_72356_length_218_cov_1.530055_g64415_i0forward_frame_3 - 0.0044 16.9 6.2 0.0044 16.9 6.2 3.0 1 1 2 3 3 3 1 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD PF00628.29 NODE_72356_length_218_cov_1.530055_g64415_i0forward_frame_3 - 0.005 16.7 13.6 0.005 16.7 13.6 2.3 2 1 0 2 2 2 1 PHD-finger Sgf11 PF08209.11 NODE_72356_length_218_cov_1.530055_g64415_i0forward_frame_3 - 0.25 10.9 0.3 0.25 10.9 0.3 3.8 4 0 0 4 4 4 0 Sgf11 (transcriptional regulation protein) Zf_RING PF16744.5 NODE_72356_length_218_cov_1.530055_g64415_i0forward_frame_3 - 0.38 10.9 15.8 1.9 8.7 15.8 2.2 1 1 0 1 1 1 0 KIAA1045 RING finger PHD_4 PF16866.5 NODE_72356_length_218_cov_1.530055_g64415_i0forward_frame_3 - 0.66 10.1 19.3 0.39 10.8 9.1 2.8 1 1 1 2 2 2 0 PHD-finger Prok-RING_1 PF14446.6 NODE_72356_length_218_cov_1.530055_g64415_i0forward_frame_3 - 0.77 9.7 18.5 0.29 11.1 13.5 2.5 2 1 0 2 2 2 0 Prokaryotic RING finger family 1 Zn_ribbon_17 PF17120.5 NODE_72356_length_218_cov_1.530055_g64415_i0forward_frame_3 - 2.2 8.0 15.6 0.21 11.2 10.0 2.1 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type Pkinase PF00069.25 NODE_72353_length_218_cov_1.551913_g64412_i0forward_frame_2 - 0.001 18.5 0.4 0.0011 18.4 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72353_length_218_cov_1.551913_g64412_i0forward_frame_2 - 0.01 15.1 0.2 0.011 15.1 0.2 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase zf-RING_2 PF13639.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 5.1e-13 49.1 6.2 6.3e-13 48.8 6.2 1.1 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.4e-09 37.5 7.2 2.8e-09 36.6 7.2 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 7e-09 35.4 6.5 9.4e-09 35.0 6.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.5e-08 34.5 3.7 2.7e-08 33.7 3.7 1.3 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.7e-08 34.6 7.6 4.2e-08 33.4 7.6 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 3.2e-08 33.5 4.1 4.6e-08 33.0 4.1 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 4.3e-08 32.9 6.6 7.5e-08 32.1 6.6 1.4 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 6.4e-08 32.4 5.4 8.3e-08 32.1 5.4 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 3.2e-07 30.1 4.3 3.8e-07 29.9 4.3 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.6e-06 27.7 4.3 2.2e-06 27.2 4.3 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 5.5e-06 26.1 6.6 1.2e-05 25.0 6.7 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 1.1e-05 25.5 2.6 2.1e-05 24.6 2.6 1.5 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING PHD PF00628.29 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00014 21.7 7.5 0.00017 21.4 7.5 1.1 1 0 0 1 1 1 1 PHD-finger RINGv PF12906.7 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00019 21.5 6.9 0.00026 21.0 6.9 1.2 1 0 0 1 1 1 1 RING-variant domain Prok-RING_1 PF14446.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00019 21.3 5.9 0.0017 18.2 1.0 2.1 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-RING_4 PF14570.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00029 20.6 3.7 0.00048 19.9 3.7 1.3 1 1 0 1 1 1 1 RING/Ubox like zinc-binding domain FANCL_C PF11793.8 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00037 20.6 7.2 0.0015 18.7 7.2 1.9 1 1 0 1 1 1 1 FANCL C-terminal domain zf-Nse PF11789.8 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.00082 19.1 2.1 0.0011 18.8 2.1 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zinc_ribbon_15 PF17032.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.0019 18.9 2.7 0.002 18.8 2.7 1.1 1 0 0 1 1 1 1 zinc-ribbon family zf-UDP PF14569.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.0037 17.4 2.5 0.0046 17.1 2.5 1.1 1 0 0 1 1 1 1 Zinc-binding RING-finger C1_1 PF00130.22 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.0077 16.1 7.2 0.012 15.4 2.1 2.1 1 1 1 2 2 2 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Baculo_RING PF05883.11 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.018 15.0 1.5 0.021 14.8 1.5 1.2 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Zf_RING PF16744.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.019 15.1 4.0 0.027 14.6 4.0 1.3 1 1 0 1 1 1 0 KIAA1045 RING finger PHD_4 PF16866.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.046 13.8 10.8 0.47 10.6 10.9 2.0 1 1 1 2 2 2 0 PHD-finger zf-HC5HC2H PF13771.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.05 13.9 5.3 0.18 12.1 5.5 1.7 1 1 0 1 1 1 0 PHD-like zinc-binding domain zf-RING_9 PF13901.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.053 13.5 4.1 0.065 13.2 4.1 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zf-HC5HC2H_2 PF13832.6 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.062 13.5 5.3 0.2 11.8 5.4 1.7 1 1 1 2 2 2 0 PHD-zinc-finger like domain zf-RING-like PF08746.11 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.074 13.4 9.4 0.16 12.3 9.4 1.7 1 1 0 1 1 1 0 RING-like domain zf-C3H2C3 PF17122.5 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.12 12.4 13.0 1.5 8.9 13.1 2.4 1 1 0 1 1 1 0 Zinc-finger Vps39_2 PF10367.9 NODE_72352_length_218_cov_1.562842_g64411_i0reverse_frame_2 - 0.31 11.5 3.9 0.69 10.4 0.7 2.0 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 MIEAP PF16026.5 NODE_72352_length_218_cov_1.562842_g64411_i0forward_frame_3 - 0.013 15.8 0.1 0.013 15.8 0.1 1.1 1 0 0 1 1 1 0 Mitochondria-eating protein DUF4703 PF15775.5 NODE_72352_length_218_cov_1.562842_g64411_i0forward_frame_3 - 0.023 14.5 0.4 0.023 14.5 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4703) Arm_vescicular PF18770.1 NODE_72351_length_218_cov_1.562842_g64410_i0reverse_frame_2 - 0.036 14.0 0.5 0.058 13.3 0.5 1.3 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor Csm1 PF12539.8 NODE_72351_length_218_cov_1.562842_g64410_i0reverse_frame_2 - 0.098 13.3 0.1 0.12 13.0 0.1 1.2 1 0 0 1 1 1 0 Chromosome segregation protein Csm1/Pcs1 LPD11 PF18824.1 NODE_72350_length_218_cov_1.568306_g64409_i0reverse_frame_3 - 0.01 15.9 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 11 HU-CCDC81_bac_2 PF18175.1 NODE_72350_length_218_cov_1.568306_g64409_i0reverse_frame_3 - 0.14 12.0 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 Rad51 PF08423.11 NODE_72349_length_218_cov_1.568306_g64408_i0reverse_frame_2 - 3e-29 102.0 0.3 3.3e-29 101.9 0.3 1.0 1 0 0 1 1 1 1 Rad51 LemA PF04011.12 NODE_72349_length_218_cov_1.568306_g64408_i0reverse_frame_2 - 0.071 13.0 0.0 0.078 12.8 0.0 1.1 1 0 0 1 1 1 0 LemA family Comm PF15957.5 NODE_72347_length_218_cov_1.590164_g64406_i0forward_frame_2 - 0.072 13.4 2.0 0.13 12.6 2.0 1.4 1 0 0 1 1 1 0 Commissureless DUF3810 PF12725.7 NODE_72347_length_218_cov_1.590164_g64406_i0forward_frame_2 - 0.69 9.2 8.4 0.76 9.1 8.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Lamprin PF06403.11 NODE_72335_length_218_cov_1.666667_g64394_i0forward_frame_3 - 1.8 8.5 13.7 5.6 6.9 13.7 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_72335_length_218_cov_1.666667_g64394_i0forward_frame_2 - 2.5 8.1 14.0 18 5.3 14.0 1.9 1 1 0 1 1 1 0 Lamprin CBP_BcsN PF17038.5 NODE_72333_length_218_cov_1.683060_g64392_i0forward_frame_3 - 0.013 14.8 0.2 0.014 14.7 0.2 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsN HigB_toxin PF09907.9 NODE_72333_length_218_cov_1.683060_g64392_i0forward_frame_2 - 0.018 15.2 0.2 0.022 15.0 0.2 1.1 1 0 0 1 1 1 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system Rer1 PF03248.13 NODE_72331_length_218_cov_1.715847_g64390_i0reverse_frame_2 - 0.06 13.1 0.0 0.06 13.1 0.0 1.0 1 0 0 1 1 1 0 Rer1 family ARL2_Bind_BART PF11527.8 NODE_72326_length_218_cov_1.732240_g64385_i0reverse_frame_2 - 0.022 14.9 0.4 0.025 14.7 0.4 1.0 1 0 0 1 1 1 0 The ARF-like 2 binding protein BART IFT57 PF10498.9 NODE_72326_length_218_cov_1.732240_g64385_i0reverse_frame_2 - 0.029 13.3 2.0 0.034 13.1 2.0 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 DUF5567 PF17722.1 NODE_72325_length_218_cov_1.743169_g64384_i0forward_frame_2 - 0.034 14.0 0.3 0.037 13.9 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5567) Castor_Poll_mid PF06241.12 NODE_72323_length_218_cov_1.748634_g64382_i0forward_frame_2 - 0.076 13.0 0.1 0.096 12.7 0.1 1.2 1 0 0 1 1 1 0 Castor and Pollux, part of voltage-gated ion channel TatD_DNase PF01026.21 NODE_72322_length_218_cov_1.748634_g64381_i0forward_frame_3 - 2.9e-08 33.4 0.0 3.4e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase DUF1492 PF07374.11 NODE_72322_length_218_cov_1.748634_g64381_i0forward_frame_3 - 0.14 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) Med11 PF10280.9 NODE_72314_length_218_cov_1.792350_g64373_i0forward_frame_2 - 0.051 14.0 0.1 0.059 13.8 0.1 1.0 1 0 0 1 1 1 0 Mediator complex protein TMEM171 PF15471.6 NODE_72314_length_218_cov_1.792350_g64373_i0forward_frame_2 - 1.1 8.2 5.7 1 8.3 5.7 1.0 1 0 0 1 1 1 0 Transmembrane protein family 171 His_leader PF08047.11 NODE_72311_length_218_cov_1.803279_g64370_i0reverse_frame_2 - 2.2e-08 33.7 20.2 2.2e-08 33.7 20.2 1.6 2 0 0 2 2 2 1 Histidine operon leader peptide DUF2865 PF11064.8 NODE_72307_length_218_cov_1.841530_g64366_i0reverse_frame_2 - 0.018 15.4 0.0 0.021 15.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2865) DUF3854 PF12965.7 NODE_72305_length_218_cov_1.879781_g64364_i0forward_frame_2 - 0.076 13.0 0.3 0.084 12.9 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) Toxin_34 PF08396.10 NODE_72304_length_218_cov_1.907104_g64363_i0reverse_frame_3 - 0.026 15.3 0.7 0.03 15.1 0.7 1.1 1 0 0 1 1 1 0 Spider toxin omega agatoxin/Tx1 family zf-C2H2_8 PF15909.5 NODE_72303_length_218_cov_1.907104_g64362_i0reverse_frame_3 - 0.081 13.2 0.6 0.093 13.0 0.6 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon zf-AN1 PF01428.16 NODE_72301_length_218_cov_1.923497_g64360_i0forward_frame_3 - 3.5 7.9 11.4 0.76 10.0 7.5 2.0 2 1 1 3 3 3 0 AN1-like Zinc finger Cyclin_C PF02984.19 NODE_72295_length_218_cov_1.967213_g64354_i0forward_frame_2 - 1.4e-06 28.4 0.0 1.6e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 Cyclin, C-terminal domain Dus PF01207.17 NODE_72294_length_218_cov_2.021858_g64353_i0reverse_frame_2 - 5.4e-05 22.4 0.0 5.8e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) AfsA PF03756.13 NODE_72293_length_218_cov_2.054645_g64352_i0forward_frame_3 - 0.084 12.9 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 A-factor biosynthesis hotdog domain Pkinase PF00069.25 NODE_72290_length_218_cov_2.092896_g64349_i0forward_frame_2 - 1.9e-14 53.7 0.0 2.1e-14 53.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72290_length_218_cov_2.092896_g64349_i0forward_frame_2 - 3.8e-05 23.1 0.0 4e-05 23.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase MARCKS PF02063.17 NODE_72289_length_218_cov_2.109290_g64348_i0forward_frame_2 - 0.39 10.7 1.1 0.43 10.5 1.1 1.0 1 0 0 1 1 1 0 MARCKS family KAAG1 PF15354.6 NODE_72288_length_218_cov_2.120219_g64347_i0forward_frame_3 - 0.0054 17.2 0.0 0.0055 17.2 0.0 1.2 1 0 0 1 1 1 1 Kidney-associated antigen 1 Lamprin PF06403.11 NODE_72287_length_218_cov_2.136612_g64346_i0forward_frame_3 - 1.3 9.0 6.8 1.5 8.8 6.8 1.2 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_72287_length_218_cov_2.136612_g64346_i0forward_frame_2 - 0.074 13.0 4.0 0.084 12.8 4.0 1.1 1 0 0 1 1 1 0 Lamprin UL73_N PF12522.8 NODE_72285_length_218_cov_2.153005_g64344_i0forward_frame_2 - 1.4 8.7 11.8 2.8 7.8 11.8 1.5 1 0 0 1 1 1 0 Cytomegalovirus glycoprotein N terminal Peptidase_M90 PF06167.12 NODE_72284_length_218_cov_2.158470_g64343_i0reverse_frame_3 - 0.067 12.8 0.0 0.067 12.8 0.0 1.0 1 0 0 1 1 1 0 Glucose-regulated metallo-peptidase M90 ABC_membrane_3 PF13748.6 NODE_72284_length_218_cov_2.158470_g64343_i0forward_frame_3 - 0.034 13.4 1.5 0.036 13.3 1.5 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region MukB PF04310.12 NODE_72282_length_218_cov_2.185792_g64341_i0forward_frame_2 - 0.1 12.4 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 MukB N-terminal Stm1_N PF09598.10 NODE_72280_length_218_cov_2.202186_g64339_i0reverse_frame_3 - 0.13 13.1 7.4 0.22 12.4 7.4 1.3 1 0 0 1 1 1 0 Stm1 MSSP PF03940.13 NODE_72280_length_218_cov_2.202186_g64339_i0forward_frame_3 - 0.094 12.3 2.9 0.15 11.7 2.9 1.3 1 0 0 1 1 1 0 Male specific sperm protein Tubulin PF00091.25 NODE_72279_length_218_cov_2.229508_g64338_i0reverse_frame_3 - 6e-11 42.9 0.1 6.5e-11 42.8 0.1 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 NODE_72279_length_218_cov_2.229508_g64338_i0reverse_frame_3 - 1.1e-06 28.9 0.1 1.3e-06 28.6 0.1 1.1 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain DUF3000 PF11452.8 NODE_72278_length_218_cov_2.256831_g64337_i0forward_frame_3 - 0.2 11.2 1.9 0.23 11.0 1.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3000) EamA PF00892.20 NODE_72276_length_218_cov_2.284153_g64335_i0forward_frame_3 - 6.5e-05 23.1 1.2 6.8e-05 23.1 1.2 1.0 1 0 0 1 1 1 1 EamA-like transporter family Pkinase PF00069.25 NODE_72275_length_218_cov_2.306011_g64334_i0reverse_frame_3 - 1.5e-11 44.2 0.0 1.7e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72275_length_218_cov_2.306011_g64334_i0reverse_frame_3 - 0.00055 19.3 0.0 0.00056 19.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase zf-TAZ PF02135.16 NODE_72271_length_218_cov_2.366120_g64330_i0forward_frame_3 - 0.042 14.3 1.5 0.087 13.3 1.5 1.6 1 1 0 1 1 1 0 TAZ zinc finger Myb_DNA-binding PF00249.31 NODE_72269_length_218_cov_2.382514_g64328_i0forward_frame_2 - 0.088 13.0 0.8 0.3 11.3 0.9 1.9 1 1 1 2 2 2 0 Myb-like DNA-binding domain Chordopox_A15 PF05846.12 NODE_72268_length_218_cov_2.393443_g64327_i0forward_frame_2 - 0.05 13.8 0.1 0.06 13.6 0.1 1.3 1 0 0 1 1 1 0 Chordopoxvirus A15 protein PUNUT PF16913.5 NODE_72260_length_218_cov_2.606557_g64319_i0forward_frame_3 - 0.16 11.2 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Purine nucleobase transmembrane transport LSR PF05624.14 NODE_72259_length_218_cov_2.617486_g64318_i0forward_frame_3 - 2.7 8.1 8.5 3 7.9 3.2 2.1 1 1 1 2 2 2 0 Lipolysis stimulated receptor (LSR) DUF2457 PF10446.9 NODE_72257_length_218_cov_2.715847_g64316_i0reverse_frame_2 - 0.76 8.9 2.0 0.78 8.8 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF4978 PF16349.5 NODE_72256_length_218_cov_2.759563_g64315_i0reverse_frame_2 - 0.11 12.1 0.2 0.13 11.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4978) Vps26 PF03643.15 NODE_72254_length_218_cov_2.775956_g64313_i0reverse_frame_2 - 1.1e-14 54.1 0.1 1.1e-14 54.1 0.1 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 26 EAL PF00563.20 NODE_72249_length_218_cov_3.027322_g64308_i0reverse_frame_3 - 1.1e-18 67.7 0.0 1.1e-18 67.6 0.0 1.0 1 0 0 1 1 1 1 EAL domain Myticin-prepro PF10690.9 NODE_72249_length_218_cov_3.027322_g64308_i0reverse_frame_2 - 0.8 10.0 5.2 0.89 9.8 5.2 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Tyr_Deacylase PF02580.16 NODE_72247_length_218_cov_3.109290_g64306_i0reverse_frame_3 - 0.09 13.3 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 D-Tyr-tRNA(Tyr) deacylase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks375.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks375.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks375.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks375.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:35:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TOBE_2 PF08402.10 NODE_72237_length_218_cov_5.360656_g64296_i0reverse_frame_2 - 1e-05 25.6 0.3 7.3e-05 22.9 0.1 1.9 1 1 1 2 2 2 1 TOBE domain OB_MalK PF17912.1 NODE_72237_length_218_cov_5.360656_g64296_i0reverse_frame_2 - 2.4e-05 25.1 0.1 5e-05 24.0 0.0 1.5 2 0 0 2 2 2 1 MalK OB fold domain TOBE PF03459.17 NODE_72237_length_218_cov_5.360656_g64296_i0reverse_frame_2 - 0.02 15.2 0.8 0.094 13.0 0.2 2.1 2 1 0 2 2 2 0 TOBE domain U3snoRNP10 PF12397.8 NODE_72236_length_218_cov_5.448087_g64295_i0forward_frame_2 - 0.086 13.2 0.1 0.1 13.0 0.1 1.1 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 10 AraC_binding_2 PF14525.6 NODE_72235_length_218_cov_5.568306_g64294_i0forward_frame_2 - 0.04 13.6 0.1 0.044 13.5 0.1 1.0 1 0 0 1 1 1 0 AraC-binding-like domain Rad50_zn_hook PF04423.14 NODE_72232_length_218_cov_11.655738_g64291_i0forward_frame_2 - 0.013 15.3 1.6 0.019 14.8 1.5 1.4 1 1 0 1 1 1 0 Rad50 zinc hook motif zf-P11 PF03854.14 NODE_72232_length_218_cov_11.655738_g64291_i0forward_frame_2 - 0.061 13.0 0.9 0.081 12.6 0.3 1.5 2 0 0 2 2 2 0 P-11 zinc finger OrfB_Zn_ribbon PF07282.11 NODE_72232_length_218_cov_11.655738_g64291_i0forward_frame_2 - 0.14 12.1 0.7 0.16 11.9 0.7 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain SPRY PF00622.28 NODE_72231_length_218_cov_20.377049_g64290_i0forward_frame_3 - 0.062 13.4 0.0 0.11 12.6 0.0 1.4 1 1 0 1 1 1 0 SPRY domain ANATO PF01821.18 NODE_72222_length_218_cov_34.142077_g64281_i0reverse_frame_2 - 0.14 13.0 2.1 0.21 12.5 2.1 1.3 1 0 0 1 1 1 0 Anaphylotoxin-like domain Defensin_5 PF18251.1 NODE_72210_length_218_cov_53.601093_g64269_i0forward_frame_2 - 0.031 14.4 0.3 0.044 13.9 0.3 1.2 1 0 0 1 1 1 0 Fungal defensin Copsin Pex2_Pex12 PF04757.14 NODE_72209_length_218_cov_56.704918_g64268_i0reverse_frame_3 - 0.025 14.2 0.7 0.027 14.0 0.7 1.0 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region DUF3381 PF11861.8 NODE_72209_length_218_cov_56.704918_g64268_i0forward_frame_3 - 0.065 13.0 7.3 0.072 12.9 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) DUF4628 PF15429.6 NODE_72209_length_218_cov_56.704918_g64268_i0forward_frame_3 - 0.087 12.5 3.0 0.091 12.4 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4628) Microtub_bind PF13931.6 NODE_72209_length_218_cov_56.704918_g64268_i0forward_frame_3 - 0.25 11.7 3.4 0.28 11.6 3.4 1.0 1 0 0 1 1 1 0 Kinesin-associated microtubule-binding RNA_polI_A34 PF08208.11 NODE_72209_length_218_cov_56.704918_g64268_i0forward_frame_3 - 0.87 9.6 8.6 1 9.4 8.6 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF4719 PF15843.5 NODE_72206_length_218_cov_60.918033_g64265_i0reverse_frame_3 - 0.084 13.0 0.2 0.088 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) Tryp_inh PF17983.1 NODE_72206_length_218_cov_60.918033_g64265_i0forward_frame_3 - 0.45 10.7 2.7 6.4 7.0 0.1 2.3 2 0 0 2 2 2 0 Trypsin inhibitors 1,2 and 3 Cation_ATPase_N PF00690.26 NODE_72205_length_218_cov_62.278689_g64264_i0forward_frame_3 - 0.0007 19.2 0.0 0.00078 19.1 0.0 1.2 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase PF00702.26 NODE_72205_length_218_cov_62.278689_g64264_i0forward_frame_2 - 0.095 13.0 0.2 0.16 12.2 0.2 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase TIR_3 PF18567.1 NODE_72203_length_218_cov_67.021858_g64262_i0forward_frame_3 - 0.057 13.4 0.6 0.061 13.3 0.6 1.1 1 0 0 1 1 1 0 Toll/interleukin-1 receptor domain DUF5527 PF17665.1 NODE_72203_length_218_cov_67.021858_g64262_i0forward_frame_3 - 0.42 10.1 4.1 0.48 10.0 4.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5527) TMCO5 PF14992.6 NODE_72202_length_218_cov_67.311475_g64261_i0forward_frame_2 - 6.7 6.2 5.4 6.9 6.2 5.4 1.1 1 0 0 1 1 1 0 TMCO5 family PHD PF00628.29 NODE_72198_length_218_cov_71.989071_g64257_i0forward_frame_2 - 0.024 14.6 6.6 0.024 14.6 6.6 1.7 1 1 0 1 1 1 0 PHD-finger Yeast-kill-tox PF09207.11 NODE_72197_length_218_cov_79.382514_g64256_i0forward_frame_2 - 0.17 12.5 6.9 0.13 13.0 5.8 1.5 1 1 0 1 1 1 0 Yeast killer toxin Pacs-1 PF10254.9 NODE_72189_length_218_cov_121.202186_g64248_i0forward_frame_2 - 0.48 9.3 6.1 0.51 9.2 6.1 1.0 1 0 0 1 1 1 0 PACS-1 cytosolic sorting protein SR-25 PF10500.9 NODE_72189_length_218_cov_121.202186_g64248_i0forward_frame_2 - 0.89 9.1 11.5 0.98 9.0 11.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein PPV_E1_N PF00524.18 NODE_72189_length_218_cov_121.202186_g64248_i0forward_frame_2 - 3.1 8.2 7.2 4.8 7.6 7.2 1.5 1 1 0 1 1 1 0 E1 Protein, N terminal domain DUF3368 PF11848.8 NODE_72187_length_218_cov_157.234973_g64246_i0reverse_frame_3 - 0.053 13.3 0.0 0.079 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3368) Cyclin_C PF02984.19 NODE_72186_length_218_cov_164.814208_g64245_i0reverse_frame_3 - 0.09 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Cyclin, C-terminal domain SMI1_KNR4 PF09346.10 NODE_72183_length_218_cov_348.530055_g64242_i0forward_frame_3 - 0.046 14.1 0.0 0.049 14.0 0.0 1.2 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) FAD_binding_8 PF08022.12 NODE_72181_length_218_cov_465.546448_g64240_i0forward_frame_2 - 0.016 15.3 0.3 0.02 15.0 0.3 1.2 1 0 0 1 1 1 0 FAD-binding domain DSPn PF14671.6 NODE_72179_length_218_cov_2337.169399_g64238_i0forward_frame_3 - 0.032 14.7 0.0 0.039 14.4 0.0 1.2 1 0 0 1 1 1 0 Dual specificity protein phosphatase, N-terminal half DUF3482 PF11981.8 NODE_72177_length_218_cov_30286.273224_g64236_i0forward_frame_3 - 0.043 13.2 9.0 0.052 13.0 9.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) SSF PF00474.17 NODE_72172_length_219_cov_0.836957_g64231_i0reverse_frame_3 - 0.03 13.2 0.4 0.033 13.1 0.4 1.0 1 0 0 1 1 1 0 Sodium:solute symporter family Glug PF07581.12 NODE_72172_length_219_cov_0.836957_g64231_i0forward_frame_3 - 7.7 7.2 9.6 43 4.8 2.3 3.4 2 1 0 2 2 2 0 The GLUG motif DotD PF16816.5 NODE_72165_length_219_cov_0.869565_g64224_i0reverse_frame_2 - 0.095 12.7 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 DotD protein zf-FCS PF06467.14 NODE_72164_length_219_cov_0.869565_g64223_i0forward_frame_3 - 0.022 14.7 0.6 0.037 14.0 0.6 1.4 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif INTAP PF16617.5 NODE_72159_length_219_cov_0.869565_g64218_i0reverse_frame_3 - 0.16 12.3 8.6 0.23 11.8 8.7 1.3 1 1 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region DUF1840 PF08895.11 NODE_72156_length_219_cov_0.956522_g64215_i0reverse_frame_3 - 0.077 13.3 0.0 0.098 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) DUF4718 PF15842.5 NODE_72156_length_219_cov_0.956522_g64215_i0reverse_frame_3 - 0.14 11.9 0.1 0.17 11.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) PID_2 PF14719.6 NODE_72156_length_219_cov_0.956522_g64215_i0reverse_frame_2 - 0.016 15.1 0.2 0.017 15.0 0.2 1.1 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) zf-RING_10 PF16685.5 NODE_72155_length_219_cov_0.961957_g64214_i0forward_frame_2 - 0.043 14.0 0.2 0.051 13.7 0.2 1.1 1 0 0 1 1 1 0 zinc RING finger of MSL2 DUF2197 PF09963.9 NODE_72154_length_219_cov_0.972826_g64213_i0reverse_frame_3 - 0.27 11.5 1.8 1.5 9.1 0.5 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) LisH_2 PF16045.5 NODE_72152_length_219_cov_0.994565_g64211_i0reverse_frame_2 - 0.49 9.5 0.1 0.49 9.5 0.1 2.3 3 0 0 3 3 3 0 LisH Pkinase_Tyr PF07714.17 NODE_72152_length_219_cov_0.994565_g64211_i0forward_frame_2 - 4e-09 36.1 0.0 4.6e-09 35.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_72152_length_219_cov_0.994565_g64211_i0forward_frame_2 - 2.2e-08 33.8 0.0 2.2e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 NODE_72152_length_219_cov_0.994565_g64211_i0forward_frame_2 - 0.0026 17.1 0.0 0.0031 16.9 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Elicitin PF00964.17 NODE_72151_length_219_cov_0.994565_g64210_i0reverse_frame_2 - 0.0056 16.7 0.6 0.0074 16.4 0.6 1.3 1 0 0 1 1 1 1 Elicitin SID-1_RNA_chan PF13965.6 NODE_72151_length_219_cov_0.994565_g64210_i0forward_frame_2 - 0.016 13.7 5.6 0.017 13.5 5.6 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 PUCC PF03209.15 NODE_72150_length_219_cov_1.000000_g64209_i0forward_frame_3 - 0.041 12.9 0.2 0.044 12.8 0.2 1.0 1 0 0 1 1 1 0 PUCC protein Toxin_18 PF08087.11 NODE_72150_length_219_cov_1.000000_g64209_i0forward_frame_2 - 0.00048 20.0 0.5 0.00085 19.3 0.5 1.3 1 0 0 1 1 1 1 Conotoxin O-superfamily Kelch_6 PF13964.6 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 1.6e-05 25.0 0.5 0.00011 22.3 0.2 2.0 1 1 1 2 2 2 1 Kelch motif Kelch_3 PF13415.6 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 2.3e-05 24.6 1.6 0.00049 20.3 0.3 2.1 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 7.2e-05 22.7 0.7 0.00032 20.6 0.1 1.9 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 0.0021 18.0 0.3 0.0031 17.5 0.3 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 NODE_72147_length_219_cov_1.021739_g64206_i0reverse_frame_2 - 0.0023 17.5 1.3 0.0073 15.9 0.2 2.0 2 0 0 2 2 2 1 Kelch motif zf-BED PF02892.15 NODE_72146_length_219_cov_1.027174_g64205_i0reverse_frame_2 - 0.052 13.6 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 BED zinc finger ECF_trnsprt PF12822.7 NODE_72144_length_219_cov_1.032609_g64203_i0reverse_frame_3 - 0.027 14.6 0.3 0.032 14.3 0.3 1.1 1 0 0 1 1 1 0 ECF transporter, substrate-specific component PINIT PF14324.6 NODE_72143_length_219_cov_1.038043_g64202_i0forward_frame_3 - 0.069 13.5 0.2 0.072 13.4 0.2 1.3 1 1 0 1 1 1 0 PINIT domain CAAP1 PF15335.6 NODE_72140_length_219_cov_1.081522_g64199_i0forward_frame_2 - 0.074 13.6 0.1 0.096 13.2 0.1 1.2 1 0 0 1 1 1 0 Caspase activity and apoptosis inhibitor 1 FPV060 PF17614.2 NODE_72139_length_219_cov_1.086957_g64198_i0reverse_frame_3 - 0.099 12.0 1.8 0.074 12.4 1.0 1.3 1 1 0 1 1 1 0 Viral CC-type chemokine CxC3 PF18804.1 NODE_72139_length_219_cov_1.086957_g64198_i0forward_frame_2 - 0.035 14.0 0.3 0.041 13.7 0.3 1.1 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases PBP_N PF17093.5 NODE_72137_length_219_cov_1.086957_g64196_i0reverse_frame_2 - 0.024 14.9 0.2 0.028 14.7 0.2 1.0 1 0 0 1 1 1 0 Penicillin-binding protein N-terminus Cas_Csm6 PF09659.10 NODE_72135_length_219_cov_1.086957_g64194_i0forward_frame_3 - 0.078 11.7 0.3 0.085 11.6 0.3 1.0 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csm6) RTT107_BRCT_5 PF16770.5 NODE_72135_length_219_cov_1.086957_g64194_i0forward_frame_3 - 0.089 12.7 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain MORN PF02493.20 NODE_72133_length_219_cov_1.097826_g64192_i0reverse_frame_3 - 0.047 13.6 0.2 0.25 11.3 0.0 2.3 2 1 0 2 2 2 0 MORN repeat EF-hand_1 PF00036.32 NODE_72133_length_219_cov_1.097826_g64192_i0reverse_frame_3 - 0.067 12.8 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 EF hand PgaPase_1 PF06162.12 NODE_72133_length_219_cov_1.097826_g64192_i0forward_frame_2 - 0.006 16.3 0.4 0.0069 16.2 0.4 1.1 1 0 0 1 1 1 1 Putative pyroglutamyl peptidase PgaPase_1 DUF624 PF04854.14 NODE_72133_length_219_cov_1.097826_g64192_i0forward_frame_2 - 0.014 15.5 4.6 0.14 12.3 0.4 2.1 1 1 1 2 2 2 0 Protein of unknown function, DUF624 INTS5_C PF14838.6 NODE_72133_length_219_cov_1.097826_g64192_i0forward_frame_2 - 0.028 13.1 0.1 0.03 13.0 0.1 1.0 1 0 0 1 1 1 0 Integrator complex subunit 5 C-terminus CENP-N PF05238.13 NODE_72133_length_219_cov_1.097826_g64192_i0forward_frame_2 - 0.08 12.2 0.8 0.087 12.1 0.8 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Abhydrolase_6 PF12697.7 NODE_72127_length_219_cov_1.190217_g64186_i0reverse_frame_2 - 0.056 14.0 0.9 0.059 14.0 0.9 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase family AJAP1_PANP_C PF15298.6 NODE_72127_length_219_cov_1.190217_g64186_i0forward_frame_3 - 0.017 15.4 0.1 0.019 15.2 0.1 1.0 1 0 0 1 1 1 0 AJAP1/PANP C-terminus GGA_N-GAT PF18308.1 NODE_72125_length_219_cov_1.201087_g64184_i0forward_frame_2 - 0.4 10.3 4.2 0.76 9.5 0.2 2.4 2 0 0 2 2 2 0 GGA N-GAT domain SE PF08491.10 NODE_72121_length_219_cov_1.233696_g64180_i0forward_frame_2 - 0.026 13.6 0.1 0.029 13.4 0.1 1.0 1 0 0 1 1 1 0 Squalene epoxidase Keratin_B2_2 PF13885.6 NODE_72118_length_219_cov_1.233696_g64177_i0reverse_frame_3 - 0.15 12.0 20.7 0.085 12.8 4.9 2.3 1 1 1 2 2 2 0 Keratin, high sulfur B2 protein PFK PF00365.20 NODE_72118_length_219_cov_1.233696_g64177_i0reverse_frame_2 - 7.6e-10 38.6 0.0 8.8e-10 38.4 0.0 1.0 1 0 0 1 1 1 1 Phosphofructokinase CwsA PF10814.8 NODE_72116_length_219_cov_1.250000_g64175_i0forward_frame_2 - 0.064 13.4 0.2 0.064 13.4 0.2 1.1 1 0 0 1 1 1 0 Cell wall synthesis protein CwsA Cortex-I_coil PF09304.10 NODE_72113_length_219_cov_1.282609_g64172_i0forward_frame_3 - 0.022 14.9 0.0 0.025 14.8 0.0 1.1 1 0 0 1 1 1 0 Cortexillin I, coiled coil RGCC PF15151.6 NODE_72112_length_219_cov_1.282609_g64171_i0forward_frame_3 - 0.093 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Response gene to complement 32 protein family Stress-antifung PF01657.17 NODE_72110_length_219_cov_1.293478_g64169_i0reverse_frame_2 - 0.025 15.2 0.7 0.028 15.0 0.7 1.1 1 0 0 1 1 1 0 Salt stress response/antifungal tRNA-synt_1c_C PF03950.18 NODE_72108_length_219_cov_1.298913_g64167_i0reverse_frame_3 - 7.5e-14 52.0 0.0 8e-14 51.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain Rad21_Rec8 PF04824.16 NODE_72108_length_219_cov_1.298913_g64167_i0forward_frame_2 - 0.046 13.0 0.5 0.071 12.4 0.5 1.3 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein zf-BED PF02892.15 NODE_72093_length_219_cov_1.304348_g64152_i0reverse_frame_3 - 0.059 13.4 0.2 0.097 12.7 0.2 1.4 1 0 0 1 1 1 0 BED zinc finger Kinesin PF00225.23 NODE_72093_length_219_cov_1.304348_g64152_i0reverse_frame_2 - 3.4e-17 62.4 1.7 3.6e-17 62.3 1.7 1.0 1 0 0 1 1 1 1 Kinesin motor domain Phage_GPO PF05929.11 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.019 14.6 0.1 0.021 14.4 0.1 1.0 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF2756 PF10956.8 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.048 14.2 2.9 0.059 13.9 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2756) Csm1_N PF18504.1 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.097 13.0 3.8 0.096 13.0 1.3 1.9 1 1 1 2 2 2 0 Csm1 N-terminal domain YdaS_antitoxin PF15943.5 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.13 12.1 0.4 0.2 11.6 0.1 1.5 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT ORF6C PF10552.9 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.19 11.8 2.2 0.31 11.1 2.0 1.5 1 1 0 1 1 1 0 ORF6C domain FlaC_arch PF05377.11 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.26 11.7 2.2 1.5 9.3 0.2 2.1 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) TolA_bind_tri PF16331.5 NODE_72092_length_219_cov_1.309783_g64151_i0reverse_frame_3 - 0.3 11.2 11.1 1 9.5 5.7 2.3 1 1 1 2 2 2 0 TolA binding protein trimerisation OppC_N PF12911.7 NODE_72088_length_219_cov_1.331522_g64147_i0reverse_frame_3 - 0.072 13.1 1.3 0.072 13.1 1.3 2.2 2 1 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C DDE_Tnp_1 PF01609.21 NODE_72088_length_219_cov_1.331522_g64147_i0reverse_frame_2 - 0.085 12.5 0.4 0.13 11.9 0.4 1.2 1 1 0 1 1 1 0 Transposase DDE domain Gpr1_Fun34_YaaH PF01184.19 NODE_72088_length_219_cov_1.331522_g64147_i0forward_frame_3 - 0.083 12.5 5.5 0.096 12.3 5.5 1.0 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family RusA PF05866.11 NODE_72083_length_219_cov_1.369565_g64142_i0reverse_frame_2 - 0.11 13.0 0.0 0.13 12.8 0.0 1.1 1 0 0 1 1 1 0 Endodeoxyribonuclease RusA DUF43 PF01861.16 NODE_72082_length_219_cov_1.369565_g64141_i0reverse_frame_2 - 0.12 11.5 0.2 0.13 11.5 0.2 1.0 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain PEGSRP PF07623.11 NODE_72081_length_219_cov_1.375000_g64140_i0reverse_frame_3 - 0.04 13.7 2.8 0.2 11.5 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) YtpI PF14007.6 NODE_72080_length_219_cov_1.380435_g64139_i0reverse_frame_3 - 0.049 13.8 0.2 0.066 13.3 0.2 1.3 1 0 0 1 1 1 0 YtpI-like protein Antimicrobial_1 PF08018.11 NODE_72080_length_219_cov_1.380435_g64139_i0reverse_frame_3 - 0.13 12.5 1.1 0.13 12.5 1.1 1.7 2 0 0 2 2 2 0 Frog antimicrobial peptide Phi-29_GP16_7 PF06720.11 NODE_72080_length_219_cov_1.380435_g64139_i0forward_frame_2 - 0.016 15.1 0.0 0.017 14.9 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 Capsid_N PF16903.5 NODE_72075_length_219_cov_1.402174_g64134_i0reverse_frame_3 - 0.054 13.1 0.0 0.056 13.1 0.0 1.0 1 0 0 1 1 1 0 Major capsid protein N-terminus Izumo-Ig PF16706.5 NODE_72075_length_219_cov_1.402174_g64134_i0forward_frame_3 - 0.061 13.4 0.0 0.067 13.3 0.0 1.1 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain Peptidase_C6 PF00851.18 NODE_72072_length_219_cov_1.418478_g64131_i0forward_frame_3 - 0.032 13.2 0.4 0.032 13.2 0.4 1.0 1 0 0 1 1 1 0 Helper component proteinase Mg_trans_NIPA PF05653.14 NODE_72069_length_219_cov_1.418478_g64128_i0reverse_frame_2 - 0.035 13.2 0.1 0.037 13.1 0.1 1.1 1 0 0 1 1 1 0 Magnesium transporter NIPA TMEM100 PF16311.5 NODE_72068_length_219_cov_1.423913_g64127_i0forward_frame_2 - 0.61 9.7 2.3 0.8 9.3 2.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 100 DeoC PF01791.9 NODE_72064_length_219_cov_1.467391_g64123_i0reverse_frame_3 - 1.4e-05 24.8 0.0 1.5e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase RVT_2 PF07727.14 NODE_72061_length_219_cov_1.478261_g64120_i0reverse_frame_2 - 0.14 11.8 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) ATP-synt_A PF00119.20 NODE_72060_length_219_cov_1.483696_g64119_i0reverse_frame_3 - 0.015 15.3 0.0 0.016 15.2 0.0 1.1 1 0 0 1 1 1 0 ATP synthase A chain GFO_IDH_MocA PF01408.22 NODE_72055_length_219_cov_1.505435_g64114_i0reverse_frame_2 - 2.9e-05 24.9 0.1 3.6e-05 24.6 0.1 1.2 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold LRRFIP PF09738.9 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.00027 20.5 3.3 0.00058 19.4 3.3 1.5 1 1 0 1 1 1 1 LRRFIP family BRE1 PF08647.11 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.0022 18.0 2.8 0.0025 17.8 2.8 1.2 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase Spore_YhcN_YlaJ PF09580.10 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.034 14.3 0.4 0.035 14.2 0.4 1.1 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DASH_Dad3 PF08656.10 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.094 12.8 4.1 0.15 12.1 4.1 1.3 1 1 0 1 1 1 0 DASH complex subunit Dad3 DUF1664 PF07889.12 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.39 10.7 3.0 0.47 10.5 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DivIC PF04977.15 NODE_72052_length_219_cov_1.521739_g64111_i0reverse_frame_2 - 0.71 9.7 4.9 2.1 8.2 0.3 2.1 1 1 1 2 2 2 0 Septum formation initiator DUF2897 PF11446.8 NODE_72050_length_219_cov_1.527174_g64109_i0forward_frame_2 - 0.9 9.5 3.9 1.9 8.4 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) Ycf70 PF17382.2 NODE_72048_length_219_cov_1.543478_g64107_i0reverse_frame_2 - 0.074 13.5 1.3 0.084 13.3 1.3 1.1 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Sigma_reg_N PF13800.6 NODE_72048_length_219_cov_1.543478_g64107_i0reverse_frame_2 - 0.13 12.5 0.5 0.17 12.2 0.5 1.1 1 0 0 1 1 1 0 Sigma factor regulator N-terminal RTBV_P46 PF06216.11 NODE_72047_length_219_cov_1.565217_g64106_i0reverse_frame_3 - 0.23 10.3 0.0 0.26 10.1 0.0 1.1 1 0 0 1 1 1 0 Rice tungro bacilliform virus P46 protein Pdase_C33_assoc PF14756.6 NODE_72047_length_219_cov_1.565217_g64106_i0forward_frame_2 - 0.12 12.3 0.1 0.13 12.2 0.1 1.0 1 0 0 1 1 1 0 Peptidase_C33-associated domain DUF5438 PF17506.2 NODE_72042_length_219_cov_1.576087_g64101_i0reverse_frame_2 - 0.06 13.7 0.1 0.12 12.7 0.0 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5438) KH_8 PF17903.1 NODE_72035_length_219_cov_1.625000_g64094_i0forward_frame_2 - 0.097 12.8 0.2 0.16 12.0 0.1 1.5 1 1 0 1 1 1 0 Krr1 KH1 domain Ferlin_C PF16165.5 NODE_72033_length_219_cov_1.625000_g64092_i0reverse_frame_2 - 7.5 6.5 6.9 7.6 6.5 5.6 1.6 1 1 1 2 2 2 0 Ferlin C-terminus Croc_4 PF17691.1 NODE_72031_length_219_cov_1.630435_g64090_i0reverse_frame_3 - 0.0039 17.2 0.3 0.005 16.9 0.3 1.2 1 0 0 1 1 1 1 Contingent replication of cDNA 4 AAA_12 PF13087.6 NODE_72030_length_219_cov_1.635870_g64089_i0reverse_frame_2 - 0.097 12.3 0.2 0.098 12.3 0.2 1.1 1 0 0 1 1 1 0 AAA domain PDH PF02153.17 NODE_72030_length_219_cov_1.635870_g64089_i0forward_frame_3 - 2.1e-06 27.0 0.0 2.4e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Prephenate dehydrogenase ANAPC5 PF12862.7 NODE_72026_length_219_cov_1.673913_g64085_i0forward_frame_3 - 0.096 12.8 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 5 FPN1 PF06963.12 NODE_72020_length_219_cov_1.717391_g64079_i0reverse_frame_3 - 0.012 14.2 4.8 0.013 14.1 4.8 1.0 1 0 0 1 1 1 0 Ferroportin1 (FPN1) Syndecan PF01034.20 NODE_72020_length_219_cov_1.717391_g64079_i0reverse_frame_3 - 0.78 9.7 4.3 1.3 9.0 4.3 1.4 1 0 0 1 1 1 0 Syndecan domain DUF3487 PF11990.8 NODE_72020_length_219_cov_1.717391_g64079_i0reverse_frame_3 - 3.7 7.4 8.6 4.3 7.3 8.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) Pkinase PF00069.25 NODE_72018_length_219_cov_1.733696_g64077_i0forward_frame_3 - 1.3e-05 24.7 0.1 1.3e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_72018_length_219_cov_1.733696_g64077_i0forward_frame_3 - 0.00036 19.9 0.0 0.00039 19.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_72018_length_219_cov_1.733696_g64077_i0forward_frame_2 - 0.00017 21.0 0.0 0.0002 20.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Toxin_24 PF08094.11 NODE_72017_length_219_cov_1.733696_g64076_i0forward_frame_3 - 0.046 13.5 0.8 2 8.3 0.1 2.4 2 0 0 2 2 2 0 Conotoxin TVIIA/GS family AAA_12 PF13087.6 NODE_72014_length_219_cov_1.739130_g64073_i0reverse_frame_3 - 1.9e-27 96.2 0.1 2e-27 96.1 0.1 1.0 1 0 0 1 1 1 1 AAA domain EGF PF00008.27 NODE_72013_length_219_cov_1.739130_g64072_i0reverse_frame_3 - 1.5 9.2 7.1 4.8 7.6 0.1 2.5 3 0 0 3 3 3 0 EGF-like domain OSCP PF00213.18 NODE_72011_length_219_cov_1.739130_g64070_i0reverse_frame_2 - 4.9e-06 26.8 0.1 6e-06 26.5 0.1 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit zf-RING_5 PF14634.6 NODE_71999_length_219_cov_1.831522_g64058_i0reverse_frame_2 - 1.2 9.2 8.2 2.8 8.0 8.2 1.7 1 1 0 1 1 1 0 zinc-RING finger domain MMR_HSR1 PF01926.23 NODE_71997_length_219_cov_1.842391_g64056_i0reverse_frame_2 - 1e-05 25.6 0.0 1.1e-05 25.5 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase Wound_ind PF08186.11 NODE_71996_length_219_cov_1.847826_g64055_i0forward_frame_2 - 1.7 9.2 4.0 0.65 10.5 1.3 1.7 2 0 0 2 2 2 0 Wound-inducible basic protein family LAGLIDADG_2 PF03161.13 NODE_71995_length_219_cov_1.858696_g64054_i0reverse_frame_3 - 0.0049 16.9 1.2 0.0053 16.8 1.2 1.0 1 0 0 1 1 1 1 LAGLIDADG DNA endonuclease family CDC4_D PF16856.5 NODE_71995_length_219_cov_1.858696_g64054_i0forward_frame_3 - 0.52 10.2 2.8 1.6 8.7 0.4 2.2 1 1 1 2 2 2 0 Cell division control protein 4 dimerisation domain DUF2465 PF10239.9 NODE_71995_length_219_cov_1.858696_g64054_i0forward_frame_2 - 0.13 11.5 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2465) RCC1_2 PF13540.6 NODE_71990_length_219_cov_1.907609_g64049_i0forward_frame_3 - 0.0013 18.5 0.1 0.0019 18.0 0.1 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Pepsin-I3 PF06394.13 NODE_71990_length_219_cov_1.907609_g64049_i0forward_frame_3 - 0.073 13.3 0.1 0.27 11.5 0.1 1.8 1 1 1 2 2 2 0 Pepsin inhibitor-3-like repeated domain IAT_beta PF11924.8 NODE_71983_length_219_cov_1.978261_g64042_i0reverse_frame_2 - 4.1e-12 46.1 0.1 4.6e-12 45.9 0.1 1.0 1 0 0 1 1 1 1 Inverse autotransporter, beta-domain ALG3 PF05208.13 NODE_71981_length_219_cov_2.016304_g64040_i0reverse_frame_2 - 0.0077 15.7 0.3 0.0092 15.4 0.3 1.2 1 1 0 1 1 1 1 ALG3 protein DUF4187 PF13821.6 NODE_71980_length_219_cov_2.021739_g64039_i0reverse_frame_2 - 0.15 11.9 2.9 0.24 11.2 2.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) RNB PF00773.19 NODE_71976_length_219_cov_2.103261_g64035_i0reverse_frame_2 - 5.5e-08 32.5 0.2 7.8e-08 32.0 0.2 1.2 1 0 0 1 1 1 1 RNB domain DIM PF08194.12 NODE_71975_length_219_cov_2.130435_g64034_i0reverse_frame_3 - 0.027 14.6 0.9 0.052 13.8 0.9 1.5 1 0 0 1 1 1 0 DIM protein Folliculin PF11704.8 NODE_71974_length_219_cov_2.157609_g64033_i0forward_frame_3 - 0.15 11.9 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport Ntox16 PF15523.6 NODE_71973_length_219_cov_2.157609_g64032_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Novel toxin 16 ROK PF00480.20 NODE_71973_length_219_cov_2.157609_g64032_i0reverse_frame_2 - 0.19 11.2 0.2 0.2 11.1 0.2 1.1 1 0 0 1 1 1 0 ROK family DUF4632 PF15451.6 NODE_71971_length_219_cov_2.163043_g64030_i0reverse_frame_3 - 0.11 12.5 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4632) CLIP_SPH_mas PF18398.1 NODE_71971_length_219_cov_2.163043_g64030_i0forward_frame_3 - 0.11 12.9 1.3 0.11 12.9 1.3 1.7 2 0 0 2 2 2 0 Clip-domain serine protease homolog masquerade DUF4746 PF15928.5 NODE_71970_length_219_cov_2.168478_g64029_i0reverse_frame_3 - 0.02 14.3 0.1 0.022 14.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) RRM_1 PF00076.22 NODE_71969_length_219_cov_2.173913_g64028_i0forward_frame_2 - 2.6e-07 30.3 0.1 5.3e-07 29.4 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 NODE_71969_length_219_cov_2.173913_g64028_i0forward_frame_2 - 0.062 12.9 0.0 0.064 12.8 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 NODE_71969_length_219_cov_2.173913_g64028_i0forward_frame_2 - 0.067 13.2 0.0 0.1 12.7 0.0 1.3 1 1 0 1 1 1 0 RNA binding motif Nup35_RRM_2 PF14605.6 NODE_71969_length_219_cov_2.173913_g64028_i0forward_frame_2 - 0.11 12.5 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif DUF2385 PF09539.10 NODE_71965_length_219_cov_2.233696_g64024_i0reverse_frame_3 - 0.48 11.0 3.4 0.55 10.8 1.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2385) DUF4187 PF13821.6 NODE_71961_length_219_cov_2.358696_g64020_i0forward_frame_2 - 0.48 10.2 2.2 0.69 9.7 1.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4187) Fer4_12 PF13353.6 NODE_71959_length_219_cov_2.380435_g64018_i0forward_frame_3 - 0.085 13.1 0.0 0.098 12.9 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF3342 PF11822.8 NODE_71957_length_219_cov_2.391304_g64016_i0reverse_frame_3 - 0.00039 20.6 0.1 0.00062 19.9 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) Prominin PF05478.11 NODE_71957_length_219_cov_2.391304_g64016_i0reverse_frame_3 - 0.049 11.6 0.1 0.054 11.5 0.1 1.0 1 0 0 1 1 1 0 Prominin DDE_3 PF13358.6 NODE_71956_length_219_cov_2.467391_g64015_i0reverse_frame_2 - 4.1e-06 26.6 0.0 4.7e-06 26.4 0.0 1.0 1 0 0 1 1 1 1 DDE superfamily endonuclease Sedlin_N PF04628.13 NODE_71956_length_219_cov_2.467391_g64015_i0reverse_frame_2 - 0.0072 16.4 0.1 0.0081 16.3 0.1 1.0 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region Aquarius_N PF16399.5 NODE_71948_length_219_cov_2.951087_g64007_i0reverse_frame_2 - 0.044 11.8 0.0 0.047 11.8 0.0 1.0 1 0 0 1 1 1 0 Intron-binding protein aquarius N-terminus Rota_NS26 PF01525.16 NODE_71948_length_219_cov_2.951087_g64007_i0forward_frame_2 - 0.19 11.7 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Rotavirus NS26 MCU PF04678.13 NODE_71944_length_219_cov_3.211957_g64003_i0reverse_frame_3 - 0.71 9.9 2.2 0.82 9.7 2.2 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter DUF4051 PF13260.6 NODE_71944_length_219_cov_3.211957_g64003_i0reverse_frame_3 - 9.1 6.1 5.8 18 5.2 2.1 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4051) Cornifin PF02389.15 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_3 - 0.00068 19.9 1.0 0.00074 19.7 1.0 1.0 1 0 0 1 1 1 1 Cornifin (SPRR) family RskA PF10099.9 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_3 - 0.024 14.9 4.0 0.026 14.8 4.0 1.1 1 0 0 1 1 1 0 Anti-sigma-K factor rskA SR-25 PF10500.9 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_2 - 0.15 11.6 25.4 0.16 11.5 25.4 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_2 - 0.21 11.9 26.6 0.28 11.5 26.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Lin-8 PF03353.15 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_2 - 0.64 9.5 6.7 0.66 9.5 6.7 1.0 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist DUF4718 PF15842.5 NODE_71944_length_219_cov_3.211957_g64003_i0forward_frame_2 - 1.6 8.5 9.0 1.8 8.3 9.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) DUF3511 PF12023.8 NODE_71942_length_219_cov_3.309783_g64001_i0reverse_frame_2 - 0.091 12.6 2.9 0.88 9.4 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3511) TPR_MLP1_2 PF07926.12 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.001 19.1 4.5 0.0011 19.0 4.5 1.0 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein LRS4 PF10422.9 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.0044 16.6 7.3 0.0047 16.5 7.3 1.1 1 0 0 1 1 1 1 Monopolin complex subunit LRS4 Uds1 PF15456.6 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.0053 16.9 2.9 0.007 16.5 2.9 1.2 1 0 0 1 1 1 1 Up-regulated During Septation Cnn_1N PF07989.11 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.0061 16.7 6.6 0.0075 16.4 6.6 1.2 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 BBP1_C PF15272.6 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.0076 16.1 8.4 0.0087 15.9 8.4 1.0 1 0 0 1 1 1 1 Spindle pole body component BBP1, C-terminal Fez1 PF06818.15 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.018 15.5 4.8 0.02 15.4 4.8 1.1 1 0 0 1 1 1 0 Fez1 CREPT PF16566.5 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.026 14.7 2.8 0.031 14.5 2.8 1.2 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour CENP-F_leu_zip PF10473.9 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.026 14.5 5.9 0.38 10.8 5.9 1.9 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cluap1 PF10234.9 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.031 13.7 4.2 0.034 13.5 4.2 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 IFP_35_N PF07334.13 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.068 13.3 0.9 0.068 13.3 0.9 1.6 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF948 PF06103.11 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.089 13.1 0.6 0.11 12.8 0.6 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF4407 PF14362.6 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.14 11.5 2.9 0.14 11.5 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4337 PF14235.6 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.31 11.1 4.2 0.32 11.1 4.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Prefoldin PF02996.17 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.38 10.7 6.5 0.73 9.8 2.0 2.0 1 1 1 2 2 2 0 Prefoldin subunit DUF2205 PF10224.9 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.48 10.5 9.1 0.41 10.7 3.5 2.1 1 1 1 2 2 2 0 Short coiled-coil protein DivIC PF04977.15 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 0.75 9.6 7.9 0.47 10.3 1.4 2.1 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 NODE_71938_length_219_cov_3.614130_g63997_i0reverse_frame_2 - 1.5 8.0 4.0 1.5 8.0 4.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein MtaB PF12176.8 NODE_71936_length_219_cov_3.826087_g63995_i0reverse_frame_3 - 0.15 10.8 0.0 0.16 10.8 0.0 1.0 1 0 0 1 1 1 0 Methanol-cobalamin methyltransferase B subunit zf-RING_7 PF02591.15 NODE_71933_length_219_cov_4.168478_g63992_i0forward_frame_3 - 0.027 14.6 1.0 3.7 7.8 0.1 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain EspB_PE PF18625.1 NODE_71932_length_219_cov_4.326087_g63991_i0forward_frame_3 - 0.091 13.2 0.1 0.1 13.1 0.1 1.3 1 0 0 1 1 1 0 ESX-1 secreted protein B PE domain Meis_PKNOX_N PF16493.5 NODE_71931_length_219_cov_4.445652_g63990_i0forward_frame_3 - 0.13 12.6 0.9 0.19 12.1 0.9 1.2 1 0 0 1 1 1 0 N-terminal of Homeobox Meis and PKNOX1 Pkinase PF00069.25 NODE_71927_length_219_cov_14.423913_g63986_i0forward_frame_2 - 2.3e-05 23.9 0.0 2.4e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain S-antigen PF05756.11 NODE_71925_length_219_cov_15.853261_g63984_i0reverse_frame_3 - 0.2 12.1 5.3 0.28 11.6 5.3 1.3 1 0 0 1 1 1 0 S-antigen protein DLEU7 PF15760.5 NODE_71925_length_219_cov_15.853261_g63984_i0reverse_frame_3 - 2.4 7.6 6.0 2.7 7.5 6.0 1.1 1 0 0 1 1 1 0 Leukemia-associated protein 7 Ax_dynein_light PF10211.9 NODE_71925_length_219_cov_15.853261_g63984_i0reverse_frame_3 - 4.5 7.2 15.1 5 7.0 15.1 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain RseC_MucC PF04246.12 NODE_71925_length_219_cov_15.853261_g63984_i0forward_frame_2 - 8.9 6.3 7.5 10 6.1 7.5 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Enolase_C PF00113.22 NODE_71921_length_219_cov_21.081522_g63980_i0reverse_frame_3 - 2.1e-06 27.2 0.0 2.2e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain DUF1599 PF07659.11 NODE_71919_length_219_cov_31.516304_g63978_i0reverse_frame_3 - 0.012 16.1 0.8 0.017 15.6 0.8 1.3 1 0 0 1 1 1 0 Nucleotide modification associated domain 1 zf-like PF04071.12 NODE_71919_length_219_cov_31.516304_g63978_i0reverse_frame_2 - 0.058 13.3 0.1 0.065 13.2 0.1 1.2 1 0 0 1 1 1 0 Cysteine-rich small domain TYW3 PF02676.14 NODE_71919_length_219_cov_31.516304_g63978_i0forward_frame_3 - 0.35 10.2 0.6 0.51 9.7 0.6 1.2 1 0 0 1 1 1 0 Methyltransferase TYW3 Tox-MPTase4 PF15640.6 NODE_71914_length_219_cov_34.070652_g63973_i0reverse_frame_3 - 0.094 12.6 4.6 0.097 12.6 4.6 1.1 1 0 0 1 1 1 0 Metallopeptidase toxin 4 FmdE PF02663.14 NODE_71914_length_219_cov_34.070652_g63973_i0reverse_frame_3 - 1.2 9.2 4.3 1.3 9.1 4.3 1.1 1 0 0 1 1 1 0 FmdE, Molybdenum formylmethanofuran dehydrogenase operon DUF1600 PF07667.11 NODE_71912_length_219_cov_35.233696_g63971_i0forward_frame_3 - 0.036 14.3 9.3 0.048 13.9 9.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) Lar_restr_allev PF14354.6 NODE_71910_length_219_cov_37.603261_g63969_i0reverse_frame_3 - 0.0077 16.6 2.9 0.01 16.2 2.9 1.1 1 0 0 1 1 1 1 Restriction alleviation protein Lar REV PF00424.18 NODE_71910_length_219_cov_37.603261_g63969_i0reverse_frame_3 - 0.099 12.7 0.7 0.11 12.6 0.7 1.1 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) BSD PF03909.17 NODE_71910_length_219_cov_37.603261_g63969_i0reverse_frame_2 - 8.7e-10 38.5 0.0 1.1e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 BSD domain PQ-loop PF04193.14 NODE_71910_length_219_cov_37.603261_g63969_i0forward_frame_3 - 0.053 13.3 0.1 0.078 12.8 0.1 1.3 1 0 0 1 1 1 0 PQ loop repeat Orf78 PF06024.12 NODE_71909_length_219_cov_37.782609_g63968_i0reverse_frame_2 - 1 9.7 2.8 1.3 9.3 2.8 1.2 1 0 0 1 1 1 0 Orf78 (ac78) CreD PF06123.12 NODE_71908_length_219_cov_38.070652_g63967_i0reverse_frame_3 - 0.86 8.3 6.9 0.83 8.4 6.9 1.1 1 0 0 1 1 1 0 Inner membrane protein CreD DUF3437 PF11919.8 NODE_71908_length_219_cov_38.070652_g63967_i0forward_frame_2 - 0.0073 16.2 0.1 0.0086 16.0 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3437) RAWUL PF16207.5 NODE_71907_length_219_cov_39.701087_g63966_i0forward_frame_2 - 0.12 13.1 0.7 0.18 12.5 0.7 1.3 1 0 0 1 1 1 0 RAWUL domain RING finger- and WD40-associated ubiquitin-like DUF1672 PF07901.11 NODE_71904_length_219_cov_40.951087_g63963_i0reverse_frame_2 - 0.19 11.0 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1672) W2 PF02020.18 NODE_71903_length_219_cov_40.961957_g63962_i0reverse_frame_3 - 0.015 15.4 0.1 0.017 15.2 0.1 1.2 1 0 0 1 1 1 0 eIF4-gamma/eIF5/eIF2-epsilon GNAT_like PF18407.1 NODE_71902_length_219_cov_42.054348_g63961_i0reverse_frame_2 - 0.029 14.7 0.2 0.034 14.5 0.2 1.2 1 0 0 1 1 1 0 GCN5-related N-acetyltransferase like domain ODR4-like PF14778.6 NODE_71901_length_219_cov_42.489130_g63960_i0reverse_frame_2 - 0.077 11.9 1.0 0.076 12.0 1.0 1.0 1 0 0 1 1 1 0 Olfactory receptor 4-like OST3_OST6 PF04756.13 NODE_71899_length_219_cov_44.342391_g63958_i0forward_frame_3 - 0.044 13.1 0.2 0.045 13.1 0.2 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family HMG_box_2 PF09011.10 NODE_71898_length_219_cov_44.369565_g63957_i0reverse_frame_3 - 0.00051 20.6 0.0 0.00051 20.6 0.0 1.6 2 0 0 2 2 2 1 HMG-box domain HMG_box PF00505.19 NODE_71898_length_219_cov_44.369565_g63957_i0reverse_frame_3 - 0.0011 19.4 0.3 0.0011 19.4 0.3 1.7 2 0 0 2 2 2 1 HMG (high mobility group) box IL17 PF06083.11 NODE_71896_length_219_cov_48.125000_g63955_i0reverse_frame_2 - 0.067 13.7 0.6 0.083 13.4 0.6 1.2 1 0 0 1 1 1 0 Interleukin-17 Sec7_N PF12783.7 NODE_71890_length_219_cov_57.684783_g63949_i0reverse_frame_3 - 0.029 14.3 1.7 0.031 14.2 1.7 1.0 1 0 0 1 1 1 0 Guanine nucleotide exchange factor in Golgi transport N-terminal FeoB_associated PF12669.7 NODE_71890_length_219_cov_57.684783_g63949_i0forward_frame_3 - 0.018 15.4 1.1 0.038 14.4 1.1 1.5 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein TRAP-gamma PF07074.12 NODE_71890_length_219_cov_57.684783_g63949_i0forward_frame_2 - 0.077 12.6 0.0 0.085 12.4 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks376.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks376.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks376.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks376.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RINGv PF12906.7 NODE_71884_length_219_cov_60.114130_g63943_i0reverse_frame_2 - 0.011 15.9 0.5 2.7 8.2 0.2 2.1 2 0 0 2 2 2 0 RING-variant domain CPBP PF02517.16 NODE_71883_length_219_cov_67.875000_g63942_i0forward_frame_2 - 0.067 13.6 2.4 0.074 13.4 2.4 1.2 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease zf-rbx1 PF12678.7 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 1.1e-09 38.5 0.1 1.3e-09 38.2 0.1 1.1 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 2.6e-09 37.3 0.0 3.3e-09 36.9 0.0 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 2.5e-07 30.4 0.1 3.4e-07 30.0 0.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 2.6e-07 30.2 0.1 1.1e-06 28.2 0.1 1.9 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 3.8e-07 29.9 0.0 5.1e-07 29.5 0.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 7.3e-06 25.9 0.1 1.1e-05 25.4 0.1 1.3 1 0 0 1 1 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 9.9e-06 25.1 0.3 1.3e-05 24.7 0.3 1.1 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 7.6e-05 22.5 0.0 9.5e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.00053 19.9 0.0 0.00066 19.6 0.0 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.00079 19.4 0.0 0.0009 19.2 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.0025 17.7 0.0 0.003 17.4 0.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.0027 17.8 0.3 0.004 17.3 0.3 1.2 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Gp138_N PF18352.1 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.0034 17.4 0.0 0.0041 17.1 0.0 1.1 1 0 0 1 1 1 1 Phage protein Gp138 N-terminal domain zf-RING-like PF08746.11 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.028 14.7 0.3 0.043 14.1 0.3 1.2 1 0 0 1 1 1 0 RING-like domain Rtf2 PF04641.12 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.046 13.1 0.0 0.05 13.0 0.0 1.1 1 0 0 1 1 1 0 Rtf2 RING-finger RINGv PF12906.7 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.054 13.6 0.2 0.078 13.1 0.2 1.3 1 0 0 1 1 1 0 RING-variant domain zf-RING_4 PF14570.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.055 13.3 0.1 0.069 12.9 0.1 1.1 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-UDP PF14569.6 NODE_71882_length_219_cov_69.347826_g63941_i0forward_frame_3 - 0.064 13.4 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 Zinc-binding RING-finger Herpes_UL3 PF03369.13 NODE_71880_length_219_cov_76.163043_g63939_i0reverse_frame_3 - 0.17 12.4 2.6 0.19 12.2 2.6 1.1 1 0 0 1 1 1 0 Herpesvirus UL3 protein BRD4_CDT PF17105.5 NODE_71878_length_219_cov_77.679348_g63937_i0reverse_frame_3 - 0.028 14.0 0.6 0.081 12.5 0.0 1.8 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 DUF1138 PF06592.13 NODE_71878_length_219_cov_77.679348_g63937_i0reverse_frame_2 - 0.13 12.3 0.3 0.16 12.0 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1138) DUF4606 PF15379.6 NODE_71874_length_219_cov_86.478261_g63933_i0forward_frame_2 - 0.0058 16.9 0.1 0.0065 16.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4606) Autophagy_act_C PF03987.15 NODE_71874_length_219_cov_86.478261_g63933_i0forward_frame_2 - 0.048 14.3 0.3 0.95 10.1 0.2 2.1 2 0 0 2 2 2 0 Autophagocytosis associated protein, active-site domain DUF3716 PF12511.8 NODE_71872_length_219_cov_90.717391_g63931_i0reverse_frame_2 - 0.0078 16.2 0.2 0.014 15.4 0.2 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3716) Thyroglob_assoc PF16597.5 NODE_71871_length_219_cov_90.739130_g63930_i0reverse_frame_3 - 0.022 15.1 0.2 0.034 14.5 0.2 1.3 1 0 0 1 1 1 0 Thyroglobulin_1 repeat associated disordered domain RXT2_N PF08595.11 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.01 15.9 13.4 0.012 15.6 13.4 1.0 1 0 0 1 1 1 1 RXT2-like, N-terminal FAM176 PF14851.6 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.048 13.3 9.1 0.06 13.0 9.1 1.2 1 0 0 1 1 1 0 FAM176 family Pox_Ag35 PF03286.14 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.076 12.8 10.0 0.09 12.6 10.0 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF2457 PF10446.9 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.091 11.9 22.3 0.093 11.9 22.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) NOA36 PF06524.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.16 11.2 20.8 0.18 11.1 20.8 1.1 1 0 0 1 1 1 0 NOA36 protein Rhabdo_ncap PF00945.18 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.21 10.4 7.7 0.22 10.4 7.7 1.0 1 0 0 1 1 1 0 Rhabdovirus nucleocapsid protein Afi1 PF07792.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.29 11.6 9.7 0.29 11.6 9.7 1.0 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking Cwf_Cwc_15 PF04889.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.29 10.8 20.9 0.29 10.8 20.9 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DNA_pol_phi PF04931.13 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.67 8.0 20.3 0.7 7.9 20.3 1.0 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.68 8.1 15.1 0.7 8.0 15.1 1.0 1 0 0 1 1 1 0 Nop14-like family DUF688 PF05097.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.83 8.8 7.7 0.96 8.5 7.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF688) CDC45 PF02724.14 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 0.98 7.6 12.7 1 7.6 12.7 1.0 1 0 0 1 1 1 0 CDC45-like protein RPN2_C PF18004.1 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 1.1 9.1 6.7 1.3 8.9 6.7 1.0 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain TRAP_alpha PF03896.16 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 1.2 8.3 9.0 1.2 8.2 9.0 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit BUD22 PF09073.10 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 1.6 7.9 12.6 1.7 7.9 12.6 1.0 1 0 0 1 1 1 0 BUD22 CENP-B_dimeris PF09026.10 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 2.4 8.6 24.9 3.1 8.3 24.9 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DUF1168 PF06658.12 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 2.4 8.0 11.0 2.8 7.8 11.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) FYDLN_acid PF09538.10 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 2.5 8.8 19.0 2.7 8.7 19.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) DUF5520 PF17658.1 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 3.4 6.7 7.6 3.7 6.6 7.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5520) AIM3 PF17096.5 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 3.8 8.5 6.6 5 8.1 6.6 1.2 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 Tom22 PF04281.13 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 5 6.9 9.7 5.6 6.8 9.7 1.1 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 Sigma70_ner PF04546.13 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 8.2 6.2 15.0 9.4 6.1 15.0 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region DUF4637 PF15470.6 NODE_71870_length_219_cov_92.073826_g63929_i0reverse_frame_3 - 9.2 6.0 9.7 11 5.7 9.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) DUF3446 PF11928.8 NODE_71870_length_219_cov_92.073826_g63929_i0forward_frame_3 - 0.011 16.1 15.0 0.012 15.9 15.0 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain DUF1117 PF06547.12 NODE_71870_length_219_cov_92.073826_g63929_i0forward_frame_3 - 2.7 8.6 7.8 3.3 8.3 7.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) DUF1700 PF08006.11 NODE_71870_length_219_cov_92.073826_g63929_i0forward_frame_2 - 2.3 7.7 17.6 2.6 7.5 17.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Hum_adeno_E3A PF05393.11 NODE_71868_length_219_cov_97.467391_g63927_i0reverse_frame_2 - 0.033 14.2 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein Myelin_PLP PF01275.19 NODE_71867_length_219_cov_108.722826_g63926_i0reverse_frame_2 - 2.4 8.0 11.5 2.7 7.8 11.5 1.1 1 0 0 1 1 1 0 Myelin proteolipid protein (PLP or lipophilin) Pox_RNA_Pol_19 PF05320.12 NODE_71867_length_219_cov_108.722826_g63926_i0forward_frame_3 - 0.047 13.7 10.8 0.052 13.5 10.8 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit DUF4811 PF16069.5 NODE_71865_length_219_cov_120.570652_g63924_i0forward_frame_2 - 0.014 15.3 0.6 0.015 15.1 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4811) Pacs-1 PF10254.9 NODE_71865_length_219_cov_120.570652_g63924_i0forward_frame_2 - 0.93 8.4 6.0 0.91 8.4 6.0 1.0 1 0 0 1 1 1 0 PACS-1 cytosolic sorting protein DUF4716 PF15837.5 NODE_71861_length_219_cov_138.619565_g63920_i0forward_frame_3 - 0.14 12.2 0.9 0.24 11.5 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) Fer4_2 PF12797.7 NODE_71860_length_219_cov_141.271739_g63919_i0forward_frame_2 - 0.04 14.0 2.4 0.059 13.5 2.4 1.3 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_71860_length_219_cov_141.271739_g63919_i0forward_frame_2 - 0.072 13.2 2.0 0.11 12.6 2.0 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain DUF4691 PF15762.5 NODE_71853_length_219_cov_202.701087_g63912_i0forward_frame_2 - 0.013 15.7 1.6 0.014 15.5 1.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4691) DUF2284 PF10050.9 NODE_71851_length_219_cov_236.983696_g63910_i0reverse_frame_3 - 0.0082 15.9 0.6 0.0091 15.7 0.6 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) zn-ribbon_14 PF16503.5 NODE_71850_length_219_cov_457.701087_g63909_i0forward_frame_3 - 0.071 12.6 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 Zinc-ribbon DUF92 PF01940.16 NODE_71849_length_219_cov_473.364130_g63908_i0forward_frame_2 - 0.13 11.6 0.4 0.14 11.6 0.4 1.0 1 0 0 1 1 1 0 Integral membrane protein DUF92 Gamma-thionin PF00304.20 NODE_71847_length_219_cov_3432.331522_g63906_i0forward_frame_3 - 0.52 10.6 6.7 1.1 9.5 6.8 1.8 1 1 0 1 1 1 0 Gamma-thionin family DUF1422 PF07226.11 NODE_71845_length_219_cov_126178.125000_g63904_i0forward_frame_2 - 0.41 10.7 4.2 0.12 12.3 1.5 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1422) LST1 PF05083.13 ORF99964 - 4 7.8 7.3 1.1 9.6 1.7 2.0 1 1 1 2 2 2 0 LST-1 protein CAMSAP_CKK PF08683.11 ORF98650 - 0.021 15.0 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 Microtubule-binding calmodulin-regulated spectrin-associated HTH_29 PF13551.6 ORF98650 - 0.08 13.0 0.4 0.088 12.8 0.4 1.3 1 1 0 1 1 1 0 Winged helix-turn helix Ribosomal_L44 PF00935.19 ORF98508 - 3e-20 72.4 7.6 3.6e-20 72.2 7.6 1.1 1 0 0 1 1 1 1 Ribosomal protein L44 DUF819 PF05684.12 ORF9820 - 9.5e-13 47.9 0.1 1.1e-12 47.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF819) YfdX PF10938.8 ORF98125 - 4e-21 75.5 0.6 4.3e-21 75.4 0.6 1.0 1 0 0 1 1 1 1 YfdX protein Pox_D5 PF03288.16 ORF98022 - 1.4 9.4 3.8 2.2 8.8 3.8 1.6 1 1 0 1 1 1 0 Poxvirus D5 protein-like Peptidase_M7 PF02031.16 ORF97820 - 0.011 15.8 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Streptomyces extracellular neutral proteinase (M7) family Sh_2 PF17512.2 ORF97820 - 0.042 13.6 1.1 0.039 13.7 1.1 1.1 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein Lenti_VIF_2 PF07401.12 ORF97611 - 0.013 14.9 0.0 0.014 14.7 0.0 1.0 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein US10 PF17617.2 ORF9746 - 0.39 10.8 4.9 0.41 10.7 4.5 1.3 1 1 0 1 1 1 0 Viral unique short region 10 Strabismus PF06638.11 ORF9746 - 3.2 6.3 5.3 3.5 6.2 5.3 1.0 1 0 0 1 1 1 0 Strabismus protein DUF2737 PF10930.8 ORF96790 - 0.19 11.3 0.1 0.32 10.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2737) Peptidase_M24_C PF16188.5 ORF96608 - 0.043 13.9 0.1 0.067 13.3 0.1 1.2 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 SPICE PF15678.5 ORF96347 - 0.021 14.2 0.5 0.023 14.0 0.5 1.0 1 0 0 1 1 1 0 Centriole duplication and mitotic chromosome congression DUF4658 PF15555.6 ORF96040 - 0.13 12.4 0.1 0.14 12.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) Zn_ribbon_SprT PF17283.2 ORF95999 - 0.067 13.1 0.5 0.13 12.1 0.5 1.4 1 0 0 1 1 1 0 SprT-like zinc ribbon domain DUF4156 PF13698.6 ORF95491 - 0.13 12.6 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4156) Phtf-FEM1B_bdg PF12129.8 ORF95263 - 0.066 13.0 3.5 0.07 13.0 3.5 1.1 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor DUF5059 PF16502.5 ORF94839 - 0.18 10.5 0.0 0.2 10.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5059) Uma2 PF05685.12 ORF94839 - 0.19 11.3 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative restriction endonuclease MpPF1 PF07668.11 ORF94762 - 0.1 11.9 0.2 0.11 11.8 0.2 1.0 1 0 0 1 1 1 0 M penetrans paralogue family 1 ETRAMP PF09716.10 ORF94723 - 0.33 11.0 0.6 0.41 10.7 0.5 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) ECF-ribofla_trS PF07155.12 ORF94651 - 0.031 14.3 0.1 0.033 14.2 0.1 1.1 1 0 0 1 1 1 0 ECF-type riboflavin transporter, S component Glyco_hydro_16 PF00722.21 ORF94520 - 0.045 13.2 0.2 0.052 13.0 0.2 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 16 Dicty_CAD PF05720.12 ORF9431 - 0.13 12.2 0.1 0.18 11.8 0.1 1.3 1 1 0 1 1 1 0 Cell-cell adhesion domain Acp26Ab PF05777.12 ORF94145 - 0.022 15.4 0.3 0.026 15.1 0.3 1.1 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) Notch PF00066.17 ORF94015 - 0.51 10.8 4.3 0.22 12.0 1.8 1.7 2 0 0 2 2 2 0 LNR domain Lenti_VIF_2 PF07401.12 ORF93967 - 0.013 14.9 0.0 0.014 14.7 0.0 1.0 1 0 0 1 1 1 0 Bovine Lentivirus VIF protein CENP-W PF15510.6 ORF93165 - 5.1 7.4 6.1 1.3 9.3 1.6 1.9 1 1 1 2 2 2 0 CENP-W protein TauE PF01925.19 ORF92847 - 4e-05 23.4 0.4 4e-05 23.4 0.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF2568 PF10823.8 ORF92847 - 0.018 15.3 0.6 0.034 14.4 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2568) Elf4 PF07011.11 ORF92429 - 1.9 8.4 7.8 75 3.3 7.8 2.3 1 1 0 1 1 1 0 Early Flowering 4 domain GPS PF01825.21 ORF92226 - 0.0017 18.9 0.2 0.0023 18.4 0.2 1.3 1 0 0 1 1 1 1 GPCR proteolysis site, GPS, motif CholecysA-Rec_N PF09193.10 ORF92055 - 2.2 8.3 5.0 4.3 7.4 5.0 1.7 1 1 0 1 1 1 0 Cholecystokinin A receptor, N-terminal DUF4187 PF13821.6 ORF91462 - 0.07 12.9 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) IDEAL PF08858.10 ORF91170 - 0.033 13.9 0.8 0.033 13.9 0.8 2.4 2 2 0 2 2 2 0 IDEAL domain GrpE PF01025.19 ORF91170 - 0.05 13.3 1.3 0.049 13.3 1.3 1.0 1 0 0 1 1 1 0 GrpE FAM165 PF14981.6 ORF91078 - 0.096 12.5 0.6 0.41 10.5 0.6 1.9 1 1 0 1 1 1 0 FAM165 family YlqD PF11068.8 ORF91042 - 0.0019 18.6 1.3 0.0019 18.6 1.3 1.0 1 0 0 1 1 1 1 YlqD protein DUF5082 PF16888.5 ORF91042 - 0.004 17.4 4.7 0.0063 16.8 4.7 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF5082) GrpE PF01025.19 ORF91042 - 0.0046 16.6 2.6 0.0048 16.6 2.6 1.2 1 0 0 1 1 1 1 GrpE BshC PF10079.9 ORF91042 - 0.014 14.2 1.3 0.015 14.1 1.3 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC Jnk-SapK_ap_N PF09744.9 ORF91042 - 0.016 15.4 2.2 0.017 15.3 2.2 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 ZapB PF06005.12 ORF91042 - 0.024 15.1 1.8 0.033 14.6 1.8 1.2 1 0 0 1 1 1 0 Cell division protein ZapB PTPS PF01242.19 ORF91042 - 0.031 14.2 0.1 0.036 14.0 0.1 1.1 1 0 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase BLOC1_2 PF10046.9 ORF91042 - 0.044 14.1 4.2 0.076 13.3 4.1 1.3 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Tup_N PF08581.10 ORF91042 - 0.11 12.8 5.3 1.4 9.3 5.3 2.2 1 1 0 1 1 1 0 Tup N-terminal LMP PF04778.12 ORF91042 - 0.13 12.2 8.2 0.06 13.3 4.8 1.8 1 1 1 2 2 2 0 LMP repeated region Cullin PF00888.22 ORF9101 - 0.0082 14.8 0.2 0.0085 14.8 0.2 1.1 1 0 0 1 1 1 1 Cullin family Lipin_N PF04571.14 ORF90637 - 0.095 12.7 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 lipin, N-terminal conserved region EPF PF17181.4 ORF90264 - 0.0094 15.9 0.5 0.015 15.3 0.5 1.3 1 0 0 1 1 1 1 Epidermal patterning factor proteins DUF1247 PF06851.11 ORF90264 - 0.023 14.7 0.5 0.024 14.6 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) EGF_alliinase PF04863.13 ORF89246 - 0.0091 16.4 3.7 0.014 15.8 3.7 1.2 1 0 0 1 1 1 1 Alliinase EGF-like domain DUF5090 PF17009.5 ORF89101 - 5.2 7.0 12.9 5.8 6.8 12.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) VDE PF07137.11 ORF88103 - 0.11 12.0 0.1 0.12 11.8 0.1 1.0 1 0 0 1 1 1 0 VDE lipocalin domain DUF4568 PF15132.6 ORF88058 - 0.072 12.5 0.4 0.099 12.0 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4568) RNA_ligase PF09414.10 ORF88058 - 0.13 12.6 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 RNA ligase DUF3006 PF11213.8 ORF87821 - 0.052 13.8 2.4 0.064 13.5 2.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3006) StbA PF06406.11 ORF87821 - 0.19 10.9 4.0 0.19 10.9 4.0 1.0 1 0 0 1 1 1 0 StbA protein UPF0697 PF15117.6 ORF86672 - 0.0035 17.4 0.0 0.0043 17.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0697 IPI_T4 PF11634.8 ORF86672 - 0.18 11.8 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclease inhibitor from bacteriophage T4 adh_short_C2 PF13561.6 ORF85756 - 2e-08 34.1 0.0 2.2e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Fer4_21 PF14697.6 ORF85440 - 6.8 6.9 11.7 0.63 10.2 6.8 1.8 2 1 0 2 2 2 0 4Fe-4S dicluster domain Glyco_hydro_65C PF03633.15 ORF85415 - 0.099 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain YoaP PF14268.6 ORF84924 - 0.31 10.6 3.7 0.37 10.3 0.2 2.1 1 1 1 2 2 2 0 YoaP-like Diphthamide_syn PF01866.17 ORF84877 - 0.11 11.9 1.1 0.12 11.8 1.1 1.1 1 0 0 1 1 1 0 Putative diphthamide synthesis protein PAD_M PF08527.10 ORF84877 - 0.26 11.0 2.0 0.26 10.9 2.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain FAD_binding_4 PF01565.23 ORF84686 - 0.14 11.9 0.1 0.18 11.6 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain Reovirus_M2 PF05993.12 ORF84223 - 0.18 9.9 0.1 0.19 9.8 0.1 1.0 1 0 0 1 1 1 0 Reovirus major virion structural protein Mu-1/Mu-1C (M2) C5HCH PF17982.1 ORF8374 - 0.99 9.6 11.5 4.2 7.6 4.1 2.2 1 1 1 2 2 2 0 NSD Cys-His rich domain Phosphoprotein PF00922.17 ORF83525 - 0.098 12.2 0.0 0.098 12.2 0.0 1.0 1 0 0 1 1 1 0 Vesiculovirus phosphoprotein DUF4080 PF13311.6 ORF83483 - 0.035 14.3 1.9 0.039 14.2 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4080) Lipoprotein_3 PF00938.17 ORF82968 - 0.018 15.2 0.1 0.024 14.8 0.1 1.3 1 1 0 1 1 1 0 Lipoprotein Trep_Strep PF09605.10 ORF82968 - 0.065 13.2 0.1 0.074 13.0 0.1 1.1 1 0 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) zf-C6H2 PF15801.5 ORF82604 - 4.2e-19 68.6 10.0 5.1e-19 68.3 10.0 1.1 1 0 0 1 1 1 1 zf-MYND-like zinc finger, mRNA-binding zf-MYND PF01753.18 ORF82604 - 0.00013 22.0 4.4 0.00021 21.3 4.4 1.3 1 0 0 1 1 1 1 MYND finger zf-HIT PF04438.16 ORF82604 - 0.059 13.2 6.4 0.095 12.6 6.4 1.4 1 0 0 1 1 1 0 HIT zinc finger PRA1 PF03208.19 ORF81734 - 0.78 9.4 7.5 0.82 9.3 7.5 1.0 1 0 0 1 1 1 0 PRA1 family protein DUF4490 PF14892.6 ORF81315 - 3.6e-13 49.4 1.8 3.8e-13 49.4 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) ThiI PF02568.14 ORF81198 - 0.1 12.2 0.4 0.12 12.0 0.4 1.0 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) TRAPPC10 PF12584.8 ORF81152 - 0.00054 19.7 0.0 0.00056 19.7 0.0 1.0 1 0 0 1 1 1 1 Trafficking protein particle complex subunit 10, TRAPPC10 Gryzun-like PF12742.7 ORF81152 - 0.032 14.2 0.0 0.041 13.9 0.0 1.2 1 0 0 1 1 1 0 Gryzun, putative Golgi trafficking ChitinaseA_N PF08329.10 ORF80557 - 0.07 12.8 0.0 0.075 12.7 0.0 1.1 1 0 0 1 1 1 0 Chitinase A, N-terminal domain MRF_C2 PF13888.6 ORF80557 - 0.096 12.6 0.7 0.11 12.4 0.7 1.1 1 0 0 1 1 1 0 Myelin gene regulatory factor C-terminal domain 2 Cytochrom_c3_2 PF14537.6 ORF80120 - 0.044 14.2 0.1 0.05 14.1 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c3 DUF397 PF04149.12 ORF79946 - 0.046 13.8 2.0 0.078 13.0 2.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF397) DUF4901 PF16244.5 ORF79502 - 0.059 12.7 0.1 0.093 12.1 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4901) fn3_2 PF16893.5 ORF78876 - 0.029 14.5 0.1 0.036 14.2 0.1 1.2 1 0 0 1 1 1 0 Fibronectin type III domain zf-AN1 PF01428.16 ORF78704 - 0.14 12.3 7.9 0.33 11.2 7.9 1.7 1 1 0 1 1 1 0 AN1-like Zinc finger DUF3342 PF11822.8 ORF78053 - 4.9e-22 78.0 0.5 5.4e-22 77.8 0.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) BTB PF00651.31 ORF78053 - 3.9e-05 23.8 0.1 4.1e-05 23.8 0.1 1.0 1 0 0 1 1 1 1 BTB/POZ domain Diphthamide_syn PF01866.17 ORF77822 - 0.11 11.9 1.1 0.12 11.8 1.1 1.1 1 0 0 1 1 1 0 Putative diphthamide synthesis protein PAD_M PF08527.10 ORF77822 - 0.26 11.0 2.0 0.26 10.9 2.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain DUF4797 PF16051.5 ORF77666 - 0.086 12.8 0.2 0.14 12.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4797) Rrp40_N PF18311.1 ORF77666 - 0.17 11.8 0.6 0.17 11.8 0.6 1.2 1 1 0 1 1 1 0 Exosome complex exonuclease Rrp40 N-terminal domain ETRAMP PF09716.10 ORF77581 - 0.33 11.0 0.6 0.41 10.7 0.5 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF2764 PF10962.8 ORF76712 - 0.12 11.9 1.0 0.13 11.7 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2764) FadR_C PF07840.12 ORF76647 - 1.3e-23 83.7 0.0 1.4e-23 83.6 0.0 1.0 1 0 0 1 1 1 1 FadR C-terminal domain UPA PF17217.3 ORF75578 - 0.12 12.2 0.2 0.14 12.0 0.2 1.1 1 0 0 1 1 1 0 UPA domain DUF1601 PF07671.11 ORF75394 - 0.11 12.4 2.6 1.2 9.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1601) DUF397 PF04149.12 ORF75301 - 0.046 13.8 2.0 0.078 13.0 2.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF397) DUF3240 PF11582.8 ORF75053 - 0.054 13.6 0.1 0.067 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3240) IL17R_fnIII_D1 PF16556.5 ORF74901 - 0.058 13.0 0.3 0.08 12.6 0.1 1.4 2 0 0 2 2 2 0 Interleukin-17 receptor, fibronectin-III-like domain 1 DUF3979 PF13141.6 ORF74885 - 0.055 13.7 0.1 0.055 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) ICAM_N PF03921.14 ORF73998 - 0.048 13.3 1.1 0.049 13.3 1.1 1.1 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain XRN_M PF17846.1 ORF73869 - 1.6e-05 24.1 0.5 1.6e-05 24.0 0.5 1.0 1 0 0 1 1 1 1 Xrn1 helical domain DUF5363 PF17320.2 ORF7301 - 0.21 11.5 7.0 0.58 10.1 1.2 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5363) PHD_Oberon PF07227.11 ORF7301 - 2.8 7.8 13.7 3.1 7.7 2.4 2.0 1 1 1 2 2 2 0 PHD - plant homeodomain finger protein Zn_ribbon_SprT PF17283.2 ORF72688 - 0.067 13.1 0.5 0.13 12.1 0.5 1.4 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Pex24p PF06398.11 ORF72148 - 5.9 5.8 9.5 6.5 5.6 9.5 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin NTPase_I-T PF01931.18 ORF71969 - 0.02 14.7 0.0 0.021 14.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF84 DUF3013 PF11217.8 ORF71969 - 0.12 12.2 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3013) NfI_DNAbd_pre-N PF10524.9 ORF71843 - 0.0043 16.9 0.5 0.0094 15.8 0.5 1.5 1 0 0 1 1 1 1 Nuclear factor I protein pre-N-terminus Hep_core_N PF08290.11 ORF71409 - 0.21 11.6 3.8 1.7 8.7 0.3 2.5 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger UPF0697 PF15117.6 ORF71331 - 0.0035 17.4 0.0 0.0043 17.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0697 IPI_T4 PF11634.8 ORF71331 - 0.18 11.8 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclease inhibitor from bacteriophage T4 XPB_DRD PF18458.1 ORF71135 - 0.12 12.3 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain DUF2614 PF11023.8 ORF70692 - 0.1 12.7 0.6 0.12 12.5 0.6 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain MmoB_DmpM PF02406.17 ORF70580 - 0.069 13.4 0.9 0.088 13.0 0.9 1.3 1 1 0 1 1 1 0 MmoB/DmpM family DUF4490 PF14892.6 ORF69732 - 3.6e-13 49.4 1.8 3.8e-13 49.4 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4490) SPATA3 PF15662.5 ORF68398 - 1.4 9.5 7.2 1.5 9.4 7.2 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family TPPK_C PF12555.8 ORF68382 - 0.15 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Thiamine pyrophosphokinase C terminal P66_CC PF16563.5 ORF67479 - 0.11 12.2 1.2 0.11 12.2 1.2 1.9 2 0 0 2 2 2 0 Coiled-coil and interaction region of P66A and P66B with MBD2 PPR_2 PF13041.6 ORF67393 - 0.0089 16.2 0.0 0.013 15.6 0.0 1.3 1 0 0 1 1 1 1 PPR repeat family PPR PF01535.20 ORF67393 - 0.055 13.7 0.0 8.8 6.8 0.0 2.4 2 0 0 2 2 2 0 PPR repeat KAR PF15222.6 ORF67393 - 0.085 13.2 0.0 0.087 13.1 0.0 1.1 1 0 0 1 1 1 0 Kidney androgen-regulated DUF3687 PF12459.8 ORF66569 - 0.0048 16.4 0.1 0.0048 16.4 0.1 1.7 2 0 0 2 2 2 1 D-Ala-teichoic acid biosynthesis protein DUF4529 PF15032.6 ORF66554 - 0.085 12.0 0.1 0.089 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) DUF4734 PF15881.5 ORF66421 - 2 8.7 5.0 13 6.1 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4734) Tmemb_55A PF09788.9 ORF6540 - 0.074 12.1 0.1 0.087 11.9 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 55A zf-Tim10_DDP PF02953.15 ORF65333 - 5.9e-07 29.0 2.5 6.4e-07 28.9 2.5 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Mad3_BUB1_I_2 PF17014.5 ORF65333 - 0.0031 17.6 0.7 0.0037 17.4 0.7 1.1 1 0 0 1 1 1 1 Putative Mad3/BUB1 like region 1 protein PepSY_2 PF13670.6 ORF65237 - 0.22 11.5 0.0 0.27 11.3 0.0 1.1 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain Xol-1_GHMP-like PF09109.10 ORF64486 - 0.47 10.3 3.5 3.1 7.7 3.5 1.9 1 1 0 1 1 1 0 Switch protein XOL-1, GHMP-like HTH_35 PF13693.6 ORF63954 - 0.052 13.6 0.0 0.059 13.4 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Endotoxin_mid PF09131.10 ORF6306 - 0.16 11.6 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Bacillus thuringiensis delta-Endotoxin, middle domain zf-LITAF-like PF10601.9 ORF62999 - 4.4e-10 39.7 15.0 6e-10 39.2 15.0 1.3 1 1 0 1 1 1 1 LITAF-like zinc ribbon domain SUa-2TM PF18179.1 ORF62999 - 0.072 12.4 0.7 0.074 12.3 0.7 1.0 1 0 0 1 1 1 0 SMODS- and Ubiquitin system-associated 2TM effector domain SNARE PF05739.19 ORF62999 - 0.2 11.7 4.8 0.46 10.5 4.8 1.6 1 1 0 1 1 1 0 SNARE domain Wza_C PF18412.1 ORF62605 - 0.22 11.3 0.1 0.22 11.3 0.1 2.1 2 0 0 2 2 2 0 Outer-membrane lipoprotein Wza C-terminal domain DUF3498 PF12004.8 ORF62432 - 0.22 10.7 2.4 0.23 10.6 2.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) p53-inducible11 PF14936.6 ORF6233 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Tumour protein p53-inducible protein 11 Dimerisation2 PF16864.5 ORF61751 - 0.014 15.4 0.9 1.3 9.0 0.1 2.1 2 0 0 2 2 2 0 Dimerisation domain tRNA_NucTransf2 PF09249.11 ORF61248 - 0.048 13.9 0.0 0.053 13.8 0.0 1.1 1 0 0 1 1 1 0 tRNA nucleotidyltransferase, second domain DUF5365 PF17326.2 ORF6117 - 0.062 13.7 0.3 0.072 13.5 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5365) Endosulfine PF04667.17 ORF61164 - 0.002 18.2 1.9 0.0024 18.0 1.9 1.2 1 0 0 1 1 1 1 cAMP-regulated phosphoprotein/endosulfine conserved region PsbN PF02468.15 ORF60713 - 0.75 9.7 3.0 0.94 9.4 1.3 1.9 1 1 1 2 2 2 0 Photosystem II reaction centre N protein (psbN) Fcf1 PF04900.12 ORF6052 - 0.041 14.3 0.2 0.044 14.2 0.2 1.1 1 0 0 1 1 1 0 Fcf1 C5HCH PF17982.1 ORF60403 - 0.99 9.6 11.5 4.2 7.6 4.1 2.2 1 1 1 2 2 2 0 NSD Cys-His rich domain ECSCR PF15820.5 ORF60337 - 0.019 14.8 0.1 0.019 14.8 0.1 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator PMG PF05287.12 ORF59694 - 0.014 15.5 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 PMG protein Spt46 PF17734.1 ORF59229 - 0.14 11.9 0.2 0.17 11.6 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 TFIIB PF00382.19 ORF58922 - 0.0073 16.3 0.0 0.01 15.8 0.0 1.3 1 0 0 1 1 1 1 Transcription factor TFIIB repeat EF-hand_14 PF17959.1 ORF58490 - 0.033 14.5 0.1 0.038 14.3 0.1 1.1 1 0 0 1 1 1 0 EF-hand domain Slx4 PF09494.10 ORF58490 - 0.088 12.8 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Slx4 endonuclease GnsAB_toxin PF08178.11 ORF58490 - 0.11 12.4 4.3 0.16 11.9 0.2 2.1 1 1 1 2 2 2 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system CBFB_NFYA PF02045.15 ORF58246 - 0.019 15.5 4.0 0.025 15.2 4.0 1.2 1 0 0 1 1 1 0 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B DUF5326 PF17260.2 ORF5801 - 0.0057 16.8 1.2 0.0083 16.2 1.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5326) ELH PF02323.15 ORF5801 - 1.1 8.6 2.2 1.4 8.3 2.2 1.1 1 0 0 1 1 1 0 Egg-laying hormone precursor Mtc PF03820.17 ORF57511 - 1.9e-14 53.5 0.0 2e-14 53.3 0.0 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier DCP1 PF06058.13 ORF57511 - 0.14 12.1 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Dcp1-like decapping family Hyccin PF09790.9 ORF56964 - 0.053 12.6 2.9 0.058 12.5 2.9 1.0 1 0 0 1 1 1 0 Hyccin INSC_LBD PF16748.5 ORF56954 - 0.00098 18.5 1.0 0.0016 17.9 1.0 1.3 1 0 0 1 1 1 1 Inscuteable LGN-binding domain DUF2599 PF10783.9 ORF5662 - 0.051 14.2 0.3 0.061 14.0 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2599) EF_assoc_1 PF08355.12 ORF56367 - 0.16 11.6 5.4 0.23 11.1 5.4 1.2 1 0 0 1 1 1 0 EF hand associated DUF1104 PF06518.11 ORF56367 - 5 7.6 15.4 1.5 9.3 12.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1104) Carla_C4 PF01623.17 ORF56345 - 0.055 13.4 7.4 0.42 10.6 5.5 2.0 1 1 1 2 2 2 0 Carlavirus putative nucleic acid binding protein Tmemb_55A PF09788.9 ORF56112 - 0.0033 16.6 0.1 0.0033 16.5 0.1 1.1 1 0 0 1 1 1 1 Transmembrane protein 55A DUF5363 PF17320.2 ORF5579 - 0.21 11.5 7.0 0.58 10.1 1.2 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5363) PHD_Oberon PF07227.11 ORF5579 - 2.8 7.8 13.7 3.1 7.7 2.4 2.0 1 1 1 2 2 2 0 PHD - plant homeodomain finger protein Imm72 PF15584.6 ORF55313 - 0.11 12.6 0.4 0.15 12.2 0.4 1.3 1 1 0 1 1 1 0 Immunity protein 72 TTL PF03133.15 ORF54592 - 9.8e-06 24.9 0.1 1.1e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family DUF2764 PF10962.8 ORF53925 - 0.12 11.9 1.0 0.13 11.7 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2764) HTH_DeoR PF08220.12 ORF53520 - 0.094 12.5 0.5 4.6 7.1 0.0 2.3 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain Sec5 PF15469.6 ORF53410 - 0.05 13.4 0.3 0.056 13.2 0.3 1.1 1 0 0 1 1 1 0 Exocyst complex component Sec5 Spidroin_N PF16763.5 ORF53410 - 0.068 13.2 0.0 0.094 12.7 0.0 1.2 1 0 0 1 1 1 0 Major ampullate spidroin 1, spider silk protein 1, N-term DUF826 PF05696.11 ORF53410 - 0.15 12.1 0.1 0.2 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF826) DUF5635 PF18685.1 ORF53253 - 0.13 12.2 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5635) E3_UbLigase_RBR PF18091.1 ORF53008 - 0.066 13.3 0.1 0.076 13.1 0.1 1.2 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain RIIa PF02197.17 ORF52922 - 1.4e-07 31.0 0.0 2e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit MORN PF02493.20 ORF51910 - 1.7e-16 59.0 21.7 6.7e-07 28.8 0.9 4.0 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 ORF51910 - 1.3 8.7 9.0 12 5.6 0.0 3.2 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain VitD-bind_III PF09164.10 ORF51528 - 0.066 13.2 0.9 0.092 12.7 0.9 1.2 1 0 0 1 1 1 0 Vitamin D binding protein, domain III Diphthamide_syn PF01866.17 ORF51406 - 0.11 11.9 1.1 0.12 11.8 1.1 1.1 1 0 0 1 1 1 0 Putative diphthamide synthesis protein PAD_M PF08527.10 ORF51406 - 0.26 11.0 2.0 0.26 10.9 2.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain vMSA PF00695.19 ORF50898 - 0.33 10.0 10.3 0.34 9.9 10.3 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus FUSC_2 PF13515.6 ORF50898 - 1.1 9.4 6.4 1.9 8.6 3.2 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein-like Fijivirus_P9-2 PF06837.11 ORF50898 - 5.2 6.5 11.5 5.8 6.3 11.5 1.3 1 1 0 1 1 1 0 Fijivirus P9-2 protein Ac81 PF05820.11 ORF50250 - 0.91 9.1 11.0 1.1 8.7 11.0 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 Prok-RING_4 PF14447.6 ORF50140 - 0.063 13.1 2.3 0.098 12.5 2.3 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 ApbA_C PF08546.11 ORF50073 - 5.6e-18 65.3 0.0 6.2e-18 65.2 0.0 1.0 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal DUF1827 PF08860.10 ORF50073 - 0.04 14.2 0.0 0.057 13.7 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1827) DUF3979 PF13141.6 ORF49353 - 0.055 13.7 0.1 0.055 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3979) DUF4738 PF15889.5 ORF48808 - 0.04 13.8 0.0 0.047 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4738) QSregVF_b PF12843.7 ORF48676 - 2.9e-29 100.7 0.3 3.2e-29 100.6 0.3 1.0 1 0 0 1 1 1 1 Putative quorum-sensing-regulated virulence factor Tmemb_55A PF09788.9 ORF4826 - 0.074 12.1 0.1 0.087 11.9 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 55A Myticin-prepro PF10690.9 ORF47346 - 4.4 7.6 8.2 1.3 9.3 4.3 1.8 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel zf-MYND PF01753.18 ORF46634 - 0.34 11.0 3.4 0.5 10.5 3.4 1.2 1 0 0 1 1 1 0 MYND finger RPA_interact_C PF14768.6 ORF46321 - 0.023 15.3 4.0 0.026 15.1 4.0 1.0 1 0 0 1 1 1 0 Replication protein A interacting C-terminal DUF3862 PF12978.7 ORF46243 - 0.023 14.5 0.2 0.026 14.3 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3862) FtsH_ext PF06480.15 ORF46243 - 0.036 14.4 0.3 0.037 14.4 0.3 1.1 1 0 0 1 1 1 0 FtsH Extracellular GreA_GreB_N PF03449.15 ORF46243 - 0.038 14.1 0.0 0.058 13.5 0.0 1.3 1 0 0 1 1 1 0 Transcription elongation factor, N-terminal PRD PF00874.20 ORF46243 - 0.067 13.5 0.1 0.08 13.2 0.1 1.1 1 0 0 1 1 1 0 PRD domain DUF3965 PF13112.6 ORF44889 - 0.058 12.6 0.3 0.062 12.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3965) TraG-D_C PF12696.7 ORF44705 - 0.29 11.1 3.0 0.32 11.0 3.0 1.1 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG DUF5409 PF17421.2 ORF44683 - 0.33 11.7 4.6 0.33 11.7 4.1 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5409) zf-Tim10_DDP PF02953.15 ORF4463 - 5.9e-07 29.0 2.5 6.4e-07 28.9 2.5 1.3 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Mad3_BUB1_I_2 PF17014.5 ORF4463 - 0.0031 17.6 0.7 0.0037 17.4 0.7 1.1 1 0 0 1 1 1 1 Putative Mad3/BUB1 like region 1 protein Hyccin PF09790.9 ORF44516 - 0.053 12.6 2.9 0.058 12.5 2.9 1.0 1 0 0 1 1 1 0 Hyccin DUF674 PF05056.12 ORF43645 - 0.33 9.8 3.6 0.3 9.9 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF674) PRR20 PF15708.5 ORF43550 - 0.099 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Proline-rich protein family 20 zf-CCCH_2 PF14608.6 ORF43519 - 0.3 11.6 1.4 0.3 11.6 1.4 2.6 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger TPR_2 PF07719.17 ORF43495 - 0.11 12.7 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TB2_DP1_HVA22 PF03134.19 ORF42714 - 1.2 9.2 8.2 1.9 8.5 8.2 1.6 1 1 0 1 1 1 0 TB2/DP1, HVA22 family RdRP_5 PF07925.11 ORF42511 - 0.17 9.2 0.5 0.18 9.1 0.5 1.0 1 0 0 1 1 1 0 Reovirus RNA-dependent RNA polymerase lambda 3 Leu_leader PF08054.11 ORF4217 - 0.12 12.0 0.2 0.29 10.8 0.2 1.6 1 0 0 1 1 1 0 Leucine operon leader peptide S-layer PF07752.11 ORF41902 - 0.055 12.5 0.0 0.056 12.5 0.0 1.0 1 0 0 1 1 1 0 S-layer protein CHMI PF02962.15 ORF41638 - 0.058 13.7 0.0 0.073 13.4 0.0 1.1 1 0 0 1 1 1 0 5-carboxymethyl-2-hydroxymuconate isomerase DUF4680 PF15730.5 ORF41638 - 0.14 12.5 0.1 0.17 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4680) DUF1852 PF08908.11 ORF41536 - 0.18 10.7 0.0 0.2 10.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1852) DUF2764 PF10962.8 ORF40828 - 0.12 11.9 1.0 0.13 11.7 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2764) DUF5041 PF16444.5 ORF40117 - 0.0017 18.6 0.1 0.0019 18.5 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5041) LnmK_N_HDF PF18238.1 ORF39542 - 0.083 12.6 0.0 0.088 12.6 0.0 1.0 1 0 0 1 1 1 0 LnmK N-terminal Hot Dog Fold domain TBX PF12598.8 ORF39299 - 0.011 16.5 0.6 0.016 16.0 0.6 1.2 1 0 0 1 1 1 0 T-box transcription factor DUF3810 PF12725.7 ORF38999 - 0.28 10.5 0.9 0.26 10.6 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Myticin-prepro PF10690.9 ORF37843 - 4.4 7.6 8.2 1.3 9.3 4.3 1.8 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel DUF4080 PF13311.6 ORF37823 - 0.035 14.3 1.9 0.039 14.2 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4080) Ribosom_S12_S23 PF00164.25 ORF37273 - 0.029 14.0 0.0 0.032 13.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S12/S23 RCC1_2 PF13540.6 ORF37177 - 7.1e-07 28.9 0.3 1.2e-06 28.2 0.3 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat PH_11 PF15413.6 ORF3650 - 0.021 15.2 0.2 0.021 15.2 0.2 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain Tmemb_55A PF09788.9 ORF36461 - 0.074 12.1 0.1 0.087 11.9 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 55A Sars6 PF12133.8 ORF36142 - 0.12 12.3 2.3 0.13 12.2 0.1 2.0 2 1 0 2 2 2 0 Open reading frame 6 from SARS coronavirus B12D PF06522.11 ORF36142 - 0.15 11.9 0.6 0.74 9.7 0.0 2.1 1 1 1 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Spt46 PF17734.1 ORF36078 - 0.14 11.9 0.2 0.17 11.6 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 PH_11 PF15413.6 ORF36005 - 0.021 15.2 0.2 0.021 15.2 0.2 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain UBM PF14377.6 ORF35380 - 0.0013 18.1 0.0 0.047 13.2 0.0 2.4 2 0 0 2 2 2 1 Ubiquitin binding region Arnt_C PF18583.1 ORF35380 - 0.056 13.1 0.0 0.061 12.9 0.0 1.3 1 0 0 1 1 1 0 Aminoarabinose transferase C-terminal domain Rtt106_N PF18215.1 ORF35380 - 0.13 12.0 0.5 1.9 8.3 0.1 2.5 2 1 1 3 3 3 0 Histone chaperone Rtt106 N-terminal domain Wzy_C PF04932.15 ORF35211 - 0.097 12.3 1.0 0.097 12.3 1.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase MORN PF02493.20 ORF35065 - 4.3e-13 48.3 17.2 9.2e-07 28.4 1.5 3.2 3 0 0 3 3 3 3 MORN repeat DNA_pol_alpha_N PF12254.8 ORF34909 - 0.036 14.1 0.0 0.049 13.7 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal EF-hand_6 PF13405.6 ORF34860 - 2.3e-06 27.1 0.6 4e-06 26.3 0.2 1.6 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF34860 - 4.6e-06 25.8 0.2 8.1e-06 25.0 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF34860 - 1.1e-05 25.8 0.5 2.2e-05 24.8 0.2 1.6 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF34860 - 0.003 17.0 0.5 0.0053 16.2 0.5 1.4 1 0 0 1 1 1 1 EF hand SBDS PF01172.18 ORF34860 - 0.049 13.7 0.1 0.055 13.5 0.1 1.1 1 0 0 1 1 1 0 Shwachman-Bodian-Diamond syndrome (SBDS) protein DUF3149 PF11346.8 ORF34289 - 0.015 14.9 0.2 0.015 14.9 0.2 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF3149) Ninjurin PF04923.12 ORF34227 - 0.023 14.6 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 Ninjurin HemY_N PF07219.13 ORF34227 - 0.064 13.5 0.0 0.069 13.3 0.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus T4SS_CagC PF16943.5 ORF34227 - 0.1 12.8 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 Cag pathogenicity island, type IV secretory system YAF2_RYBP PF17219.3 ORF34175 - 0.019 14.5 0.2 0.031 13.9 0.2 1.3 1 0 0 1 1 1 0 Yaf2/RYBP C-terminal binding motif DUF2797 PF10977.8 ORF3373 - 3.8 7.3 9.8 4.2 7.2 9.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) ACTL7A_N PF16840.5 ORF33191 - 0.077 13.1 0.8 0.099 12.7 0.8 1.3 1 0 0 1 1 1 0 Actin-like protein 7A N-terminus HHV-1_VABD PF16852.5 ORF33014 - 4.7 7.3 11.5 0.58 10.2 6.5 2.1 2 1 1 3 3 3 0 Herpes viral adaptor-to-host cellular mRNA binding domain Toxin_2 PF00451.19 ORF32941 - 0.058 13.7 2.4 5.1 7.5 0.2 2.1 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 Plasmid_parti PF01672.16 ORF32697 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein WRC PF08879.10 ORF32684 - 0.061 13.0 3.5 3.3 7.5 0.7 2.4 2 0 0 2 2 2 0 WRC UNC-50 PF05216.13 ORF32599 - 0.12 12.0 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 UNC-50 family TAS2R PF05296.13 ORF31770 - 0.2 10.8 7.7 0.21 10.6 7.7 1.0 1 0 0 1 1 1 0 Taste receptor protein (TAS2R) DUF2678 PF10856.8 ORF31770 - 0.71 9.8 3.9 0.76 9.7 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) PspB PF06667.12 ORF31770 - 9.6 6.3 6.5 1 9.5 2.0 1.6 1 1 1 2 2 2 0 Phage shock protein B MORN PF02493.20 ORF31577 - 1e-12 47.2 14.8 8.7e-08 31.6 1.6 2.8 3 0 0 3 3 3 2 MORN repeat GED PF02212.18 ORF31368 - 0.029 14.5 0.4 0.045 13.9 0.4 1.3 1 0 0 1 1 1 0 Dynamin GTPase effector domain Myticin-prepro PF10690.9 ORF31274 - 0.8 10.0 7.2 1.5 9.1 7.2 1.5 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel PrmA PF06325.13 ORF3087 - 2.8e-19 69.6 0.0 3e-19 69.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DUF3487 PF11990.8 ORF30802 - 0.38 10.7 2.2 0.43 10.5 1.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3487) DUF4337 PF14235.6 ORF30216 - 0.13 12.3 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) YoaP PF14268.6 ORF2856 - 0.31 10.6 3.7 0.37 10.3 0.2 2.1 1 1 1 2 2 2 0 YoaP-like Sprouty PF05210.13 ORF27880 - 0.052 13.9 0.2 0.056 13.8 0.2 1.1 1 0 0 1 1 1 0 Sprouty protein (Spry) DUF2600 PF10776.9 ORF27748 - 0.0048 15.8 0.4 0.0051 15.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2600) EF-hand_1 PF00036.32 ORF27608 - 8.2e-15 53.2 3.2 1e-06 27.8 0.3 2.2 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF27608 - 1.8e-13 50.8 1.6 2e-13 50.5 1.6 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF27608 - 7.3e-13 47.3 0.9 3e-06 26.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF27608 - 7.7e-09 35.3 3.4 0.00015 21.6 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF27608 - 2.3e-08 33.1 1.5 0.00011 21.5 0.2 2.4 2 0 0 2 2 2 2 EF hand Dockerin_1 PF00404.18 ORF27608 - 2.9e-06 27.4 0.8 0.0007 19.7 0.3 1.7 1 1 1 2 2 2 2 Dockerin type I domain EF-hand_9 PF14658.6 ORF27608 - 0.00016 21.9 0.1 0.0002 21.6 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain DUF2666 PF10869.8 ORF27608 - 0.055 13.7 0.0 0.066 13.4 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2666) EF-hand_4 PF12763.7 ORF27608 - 0.083 12.8 0.9 0.5 10.4 0.9 1.9 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand Flagellin_C PF00700.21 ORF2739 - 0.012 16.0 0.2 0.014 15.7 0.2 1.2 1 0 0 1 1 1 0 Bacterial flagellin C-terminal helical region TMF_DNA_bd PF12329.8 ORF27068 - 0.022 14.8 0.7 0.027 14.5 0.7 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding UPF0242 PF06785.11 ORF27068 - 0.029 14.5 1.2 0.028 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Plasmid_parti PF01672.16 ORF26219 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein UPF0697 PF15117.6 ORF2606 - 0.0035 17.4 0.0 0.0043 17.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0697 IPI_T4 PF11634.8 ORF2606 - 0.18 11.8 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclease inhibitor from bacteriophage T4 Neurokinin_B PF03823.14 ORF25950 - 0.069 13.2 0.3 0.12 12.5 0.2 1.4 1 1 0 1 1 1 0 Neurokinin B PWWP PF00855.17 ORF25226 - 2.9e-12 46.8 0.1 3.3e-12 46.7 0.1 1.1 1 0 0 1 1 1 1 PWWP domain KGK PF08872.10 ORF25090 - 0.24 11.9 0.0 0.26 11.8 0.0 1.0 1 0 0 1 1 1 0 KGK domain Zn_ribbon_SprT PF17283.2 ORF24784 - 0.067 13.1 0.5 0.13 12.1 0.5 1.4 1 0 0 1 1 1 0 SprT-like zinc ribbon domain zf-C2H2_assoc3 PF16637.5 ORF24011 - 0.035 14.3 0.9 0.039 14.1 0.9 1.2 1 0 0 1 1 1 0 Putative zinc-finger between two C2H2 zinc-fingers on Patz CHASE9 PF17153.4 ORF23844 - 0.14 12.3 0.4 0.23 11.6 0.3 1.3 1 1 0 1 1 1 0 Periplasmic sensor domain, extracellular TMIE PF16038.5 ORF23421 - 0.19 11.6 1.4 0.28 11.1 1.4 1.6 1 1 0 1 1 1 0 TMIE protein Elf1 PF05129.13 ORF23045 - 0.02 15.0 0.3 0.023 14.7 0.3 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zf-C2H2_2 PF12756.7 ORF23045 - 0.036 14.4 0.8 0.042 14.2 0.8 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Urotensin_II PF02083.15 ORF23045 - 0.17 11.6 1.5 0.17 11.6 1.5 2.3 3 0 0 3 3 3 0 Urotensin II DUF1658 PF07871.11 ORF22647 - 0.095 12.7 0.7 0.095 12.7 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) INSC_LBD PF16748.5 ORF22630 - 0.00098 18.5 1.0 0.0016 17.9 1.0 1.3 1 0 0 1 1 1 1 Inscuteable LGN-binding domain TEA PF01285.18 ORF2255 - 0.12 12.5 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 TEA/ATTS domain Dus PF01207.17 ORF22109 - 0.038 13.1 0.0 0.042 12.9 0.0 1.0 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) zf-CCCH_7 PF18586.1 ORF21565 - 0.16 12.4 0.3 0.22 11.9 0.3 1.3 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 DUF3604 PF12228.8 ORF21135 - 0.04 12.4 1.1 0.18 10.2 0.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3604) TMEM189_B_dmain PF10520.9 ORF20917 - 0.048 13.8 1.2 0.049 13.8 1.2 1.1 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain Zn_ribbon_SprT PF17283.2 ORF20588 - 0.067 13.1 0.5 0.13 12.1 0.5 1.4 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Arm-DNA-bind_5 PF17293.2 ORF20209 - 0.011 16.1 0.3 0.011 16.1 0.3 1.9 2 0 0 2 2 2 0 Arm DNA-binding domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks377.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks377.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks377.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks377.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:35:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Herpes_ICP4_N PF03584.15 ORF19484 - 0.022 14.6 0.1 0.025 14.4 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus ICP4-like protein N-terminal region CTV_P33 PF07184.11 ORF18577 - 0.14 11.2 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein HemY_N PF07219.13 ORF17451 - 3.6 7.8 5.8 0.59 10.4 2.2 1.6 1 1 1 2 2 2 0 HemY protein N-terminus Ad_cyc_g-alpha PF08509.11 ORF17215 - 0.014 15.1 3.0 0.09 12.5 0.7 2.1 2 0 0 2 2 2 0 Adenylate cyclase G-alpha binding domain zf-trcl PF13451.6 ORF16817 - 0.046 13.6 1.5 15 5.6 0.0 2.9 2 1 1 3 3 3 0 Probable zinc-ribbon domain DUF2690 PF10901.8 ORF16817 - 0.28 11.5 2.9 9.4 6.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2690) zf-MIZ PF02891.20 ORF16814 - 0.24 11.2 3.0 0.31 10.8 3.0 1.5 1 1 0 1 1 1 0 MIZ/SP-RING zinc finger DUF4130 PF13566.6 ORF16532 - 0.047 13.7 0.4 0.047 13.7 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4130 TMF_DNA_bd PF12329.8 ORF16173 - 0.022 14.8 0.7 0.027 14.5 0.7 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding UPF0242 PF06785.11 ORF16173 - 0.029 14.5 1.2 0.028 14.5 1.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4530 PF15039.6 ORF15983 - 0.13 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4530) GTP_EFTU PF00009.27 ORF15522 - 0.00032 20.3 0.3 0.00035 20.2 0.3 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain ClpS PF02617.17 ORF15522 - 0.0092 15.7 0.1 0.011 15.5 0.1 1.2 1 0 0 1 1 1 1 ATP-dependent Clp protease adaptor protein ClpS ATP_bind_1 PF03029.17 ORF15522 - 0.086 12.6 0.1 0.091 12.5 0.1 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein DUF1726 PF08351.11 ORF15522 - 0.087 12.8 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1726) L-fibroin PF05849.11 ORF15522 - 0.11 11.7 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Fibroin light chain (L-fibroin) Cupin_8 PF13621.6 ORF15293 - 0.16 11.7 0.1 0.2 11.4 0.1 1.1 1 0 0 1 1 1 0 Cupin-like domain DUF3212 PF11486.8 ORF152369 - 0.068 13.2 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3212) Feld-I_B PF09252.10 ORF152369 - 0.099 12.6 0.3 3.6 7.6 0.1 2.1 1 1 1 2 2 2 0 Allergen Fel d I-B chain DUF4080 PF13311.6 ORF151752 - 0.035 14.3 1.9 0.039 14.2 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4080) p53-inducible11 PF14936.6 ORF151584 - 0.13 12.3 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Tumour protein p53-inducible protein 11 MpPF1 PF07668.11 ORF151473 - 0.1 11.9 0.2 0.11 11.8 0.2 1.0 1 0 0 1 1 1 0 M penetrans paralogue family 1 Peptidase_M24_C PF16188.5 ORF151064 - 0.043 13.9 0.1 0.067 13.3 0.1 1.2 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 DUF5376 PF17346.2 ORF150953 - 0.055 13.8 0.1 0.062 13.7 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5376) DUF1488 PF07369.11 ORF150953 - 0.13 12.3 0.1 0.17 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1488) Plasmid_parti PF01672.16 ORF150906 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein LysR_substrate PF03466.20 ORF15063 - 1.1e-06 28.1 0.0 1.4e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain DUF2244 PF10003.9 ORF150341 - 0.093 12.4 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) zf-RING_10 PF16685.5 ORF14974 - 0.45 10.7 5.5 0.33 11.1 3.1 1.8 1 1 1 2 2 2 0 zinc RING finger of MSL2 betaPIX_CC PF16523.5 ORF149723 - 0.031 14.1 6.6 0.036 13.9 6.6 1.1 1 0 0 1 1 1 0 betaPIX coiled coil Peptidase_U57 PF05582.12 ORF149645 - 0.048 12.9 0.0 0.048 12.9 0.0 1.1 1 0 0 1 1 1 0 YabG peptidase U57 UPF0086 PF01868.16 ORF149234 - 0.081 12.9 0.3 0.14 12.1 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function UPF0086 Laminin_EGF PF00053.24 ORF149110 - 0.02 15.1 11.6 0.026 14.7 11.6 1.2 1 0 0 1 1 1 0 Laminin EGF domain Acid_PPase PF12689.7 ORF148918 - 6e-12 45.7 0.0 6.5e-12 45.6 0.0 1.0 1 0 0 1 1 1 1 Acid Phosphatase DUF2608 PF11019.8 ORF148918 - 4.1e-05 23.2 0.0 4.6e-05 23.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2608) DUF3880 PF12996.7 ORF148918 - 0.069 13.2 0.0 0.083 13.0 0.0 1.1 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) Xlink PF00193.17 ORF147780 - 0.059 13.8 0.1 0.094 13.1 0.1 1.4 1 1 1 2 2 2 0 Extracellular link domain zinc_ribbon_9 PF14369.6 ORF147780 - 0.28 11.5 3.8 0.44 10.9 3.8 1.4 1 0 0 1 1 1 0 zinc-ribbon YHS PF04945.13 ORF147619 - 0.086 13.0 0.3 0.15 12.2 0.3 1.3 1 0 0 1 1 1 0 YHS domain MORN PF02493.20 ORF147129 - 1.6e-05 24.5 11.8 0.0002 21.0 1.6 4.4 4 1 0 4 4 4 3 MORN repeat Forkhead PF00250.18 ORF146831 - 0.12 12.7 1.2 1.4 9.2 0.1 2.0 2 0 0 2 2 2 0 Forkhead domain Leg1 PF05612.12 ORF145888 - 0.079 12.1 0.3 0.086 12.0 0.3 1.1 1 0 0 1 1 1 0 Leg1 Presenilin PF01080.17 ORF145652 - 2.5 6.8 4.9 2.4 6.8 4.9 1.0 1 0 0 1 1 1 0 Presenilin Pox_D5 PF03288.16 ORF145597 - 1.4 9.4 3.8 2.2 8.8 3.8 1.6 1 1 0 1 1 1 0 Poxvirus D5 protein-like DNA_pol_alpha_N PF12254.8 ORF145146 - 0.036 14.1 0.0 0.049 13.7 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal PPTA PF01239.22 ORF145091 - 0.15 11.8 0.2 0.25 11.2 0.2 1.3 1 0 0 1 1 1 0 Protein prenyltransferase alpha subunit repeat Cation_ATPase_C PF00689.21 ORF14506 - 0.059 13.1 2.5 0.062 13.0 2.5 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus Chorismate_bind PF00425.18 ORF144932 - 0.25 10.9 0.0 0.29 10.7 0.0 1.2 1 0 0 1 1 1 0 chorismate binding enzyme Herpes_LMP1 PF05297.11 ORF144293 - 1.5 7.9 6.2 1.7 7.8 6.2 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) QRPTase_C PF01729.19 ORF14311 - 0.13 12.1 0.3 0.13 12.0 0.3 1.1 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain zf-C3HC4 PF00097.25 ORF143047 - 0.3 11.0 7.0 0.48 10.4 7.0 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Plasmid_parti PF01672.16 ORF141527 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein DUF1054 PF06335.12 ORF14091 - 0.07 13.0 0.0 0.073 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) DUF4675 PF15720.5 ORF140713 - 0.0077 16.0 3.0 0.009 15.8 3.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4675) Ribosomal_L18_c PF14204.6 ORF139071 - 1.1e-05 26.3 5.7 1.1e-05 26.3 5.7 1.7 2 0 0 2 2 2 1 Ribosomal L18 C-terminal region DUF1943 PF09172.11 ORF139071 - 0.65 9.2 5.1 0.72 9.0 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Sec62 PF03839.16 ORF139071 - 7.1 6.1 7.2 7.3 6.0 7.2 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Pectate_lyase_3 PF12708.7 ORF138022 - 0.078 12.8 0.1 0.078 12.8 0.1 1.0 1 0 0 1 1 1 0 Pectate lyase superfamily protein HPS6 PF15702.5 ORF138022 - 0.097 10.6 0.0 0.097 10.6 0.0 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein DUF3410 PF11890.8 ORF136914 - 0.072 12.9 0.0 0.08 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) Sigma_1s PF02454.16 ORF13689 - 0.039 13.9 2.4 0.04 13.9 2.4 1.1 1 0 0 1 1 1 0 Sigma 1s protein Spt46 PF17734.1 ORF136586 - 0.14 11.9 0.2 0.17 11.6 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 DUF825 PF05695.12 ORF136515 - 1.6 5.7 5.7 1.6 5.7 5.7 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF825) ETF_QO PF05187.13 ORF13604 - 0.027 14.6 0.8 0.031 14.4 0.8 1.1 1 0 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S LRR_6 PF13516.6 ORF135979 - 0.086 12.9 4.6 9.4 6.6 0.2 3.1 3 0 0 3 3 3 0 Leucine Rich repeat UL141 PF16758.5 ORF135570 - 0.0056 16.4 0.5 0.0056 16.4 0.5 1.0 1 0 0 1 1 1 1 Herpes-like virus membrane glycoprotein UL141 TraG-D_C PF12696.7 ORF135335 - 0.29 11.1 3.0 0.32 11.0 3.0 1.1 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG PRD1_DD PF11087.8 ORF135282 - 0.12 12.1 1.8 0.21 11.3 1.8 1.4 1 0 0 1 1 1 0 PRD1 phage membrane DNA delivery Xol-1_GHMP-like PF09109.10 ORF135226 - 0.47 10.3 3.5 3.1 7.7 3.5 1.9 1 1 0 1 1 1 0 Switch protein XOL-1, GHMP-like CDC24_OB3 PF17244.2 ORF134639 - 0.07 12.8 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Diphthamide_syn PF01866.17 ORF134106 - 0.11 11.9 1.1 0.12 11.8 1.1 1.1 1 0 0 1 1 1 0 Putative diphthamide synthesis protein PAD_M PF08527.10 ORF134106 - 0.26 11.0 2.0 0.26 10.9 2.0 1.0 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) middle domain DUF4051 PF13260.6 ORF133501 - 0.21 11.3 0.7 3.8 7.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) DUF5435 PF17503.2 ORF133332 - 0.31 10.7 1.1 0.35 10.6 1.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5435) Tmemb_55A PF09788.9 ORF13326 - 0.074 12.1 0.1 0.087 11.9 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 55A RIIa PF02197.17 ORF133200 - 1.4e-07 31.0 0.0 2e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit DUF674 PF05056.12 ORF132830 - 0.33 9.8 3.6 0.3 9.9 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF674) Ninjurin PF04923.12 ORF131549 - 0.023 14.6 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 Ninjurin HemY_N PF07219.13 ORF131549 - 0.064 13.5 0.0 0.069 13.3 0.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus T4SS_CagC PF16943.5 ORF131549 - 0.1 12.8 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 Cag pathogenicity island, type IV secretory system COPI_assoc PF08507.10 ORF131489 - 0.0021 18.1 3.0 0.0025 17.9 3.0 1.2 1 0 0 1 1 1 1 COPI associated protein STAG PF08514.11 ORF131428 - 0.11 12.4 0.7 0.13 12.2 0.7 1.2 1 0 0 1 1 1 0 STAG domain YlbE PF14003.6 ORF131002 - 0.098 13.1 0.1 0.22 12.0 0.0 1.6 2 0 0 2 2 2 0 YlbE-like protein Cnd3 PF12719.7 ORF130859 - 0.0074 15.5 0.3 0.0088 15.3 0.3 1.0 1 0 0 1 1 1 1 Nuclear condensing complex subunits, C-term domain Peptidase_M24_C PF16188.5 ORF130577 - 0.043 13.9 0.1 0.067 13.3 0.1 1.2 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 DUF1601 PF07671.11 ORF130447 - 0.068 13.1 0.4 8.2 6.4 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1601) Mu-conotoxin PF05374.12 ORF130298 - 0.022 14.8 1.9 0.022 14.8 1.9 1.7 2 0 0 2 2 2 0 Mu-Conotoxin DUF5056 PF16479.5 ORF128577 - 3.3 8.0 11.2 4 7.7 11.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5056) UBM PF14377.6 ORF128224 - 0.041 13.3 0.0 0.074 12.5 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin binding region UPF0697 PF15117.6 ORF127616 - 0.0035 17.4 0.0 0.0043 17.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0697 IPI_T4 PF11634.8 ORF127616 - 0.18 11.8 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclease inhibitor from bacteriophage T4 PRT_C PF08372.10 ORF127543 - 1.8 8.3 5.1 2 8.2 5.1 1.2 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal TMEM95 PF15203.6 ORF127037 - 0.065 12.9 0.0 0.068 12.8 0.0 1.1 1 0 0 1 1 1 0 TMEM95 family Serinc PF03348.15 ORF126997 - 2.6e-15 56.3 0.1 2.8e-15 56.2 0.1 1.0 1 0 0 1 1 1 1 Serine incorporator (Serinc) DUF423 PF04241.15 ORF126997 - 0.07 13.3 0.5 0.086 13.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF423) CaATP_NAI PF12515.8 ORF126214 - 0.34 10.6 3.0 0.59 9.8 2.9 1.4 1 1 0 1 1 1 0 Ca2+-ATPase N terminal autoinhibitory domain DSPc PF00782.20 ORF125060 - 0.0022 17.8 0.0 0.0024 17.7 0.0 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain TIP49_C PF17856.1 ORF12497 - 0.0048 17.0 0.2 0.0076 16.4 0.2 1.3 1 0 0 1 1 1 1 TIP49 AAA-lid domain RIIa PF02197.17 ORF124005 - 1.4e-07 31.0 0.0 2e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Regulatory subunit of type II PKA R-subunit AZUL PF16558.5 ORF123169 - 0.066 13.5 0.3 0.15 12.4 0.3 1.5 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A Ad_cyc_g-alpha PF08509.11 ORF122769 - 0.014 15.1 3.0 0.09 12.5 0.7 2.1 2 0 0 2 2 2 0 Adenylate cyclase G-alpha binding domain HSDR_N PF04313.14 ORF122602 - 0.039 13.9 0.2 0.04 13.9 0.2 1.1 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) Phage_TAC_13 PF16459.5 ORF122600 - 0.066 13.7 0.0 0.07 13.6 0.0 1.1 1 0 0 1 1 1 0 Phage tail assembly chaperone, TAC OHA PF14418.6 ORF122600 - 0.12 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 OST-HTH Associated domain IncF PF17626.2 ORF122335 - 0.39 11.1 3.4 6.8 7.1 0.5 2.0 1 1 1 2 2 2 0 Inclusion membrane protein F DUF4179 PF13786.6 ORF122126 - 0.0048 17.3 0.2 0.0058 17.1 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4179) CDC24_OB3 PF17244.2 ORF121423 - 0.099 12.3 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 P3A PF08727.11 ORF121146 - 0.0076 15.6 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 Poliovirus 3A protein like Slx4 PF09494.10 ORF121146 - 0.022 14.7 0.0 0.026 14.5 0.0 1.1 1 0 0 1 1 1 0 Slx4 endonuclease Ish1 PF10281.9 ORF120830 - 0.0035 17.6 3.2 0.27 11.6 1.9 2.2 2 0 0 2 2 2 2 Putative stress-responsive nuclear envelope protein Peptidase_M1 PF01433.20 ORF12062 - 0.0048 16.5 0.0 0.0051 16.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M1 domain EGF_alliinase PF04863.13 ORF120217 - 0.0091 16.4 3.7 0.014 15.8 3.7 1.2 1 0 0 1 1 1 1 Alliinase EGF-like domain Na_trans_cytopl PF11933.8 ORF119892 - 0.0077 16.1 0.5 0.0081 16.0 0.5 1.1 1 0 0 1 1 1 1 Cytoplasmic domain of voltage-gated Na+ ion channel Elf1 PF05129.13 ORF119715 - 0.02 15.0 0.3 0.023 14.7 0.3 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zf-C2H2_2 PF12756.7 ORF119715 - 0.036 14.4 0.8 0.042 14.2 0.8 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Urotensin_II PF02083.15 ORF119715 - 0.17 11.6 1.5 0.17 11.6 1.5 2.3 3 0 0 3 3 3 0 Urotensin II Sperm_Ag_HE2 PF05324.13 ORF119713 - 0.16 12.5 0.3 0.16 12.5 0.3 2.0 1 1 1 2 2 2 0 Sperm antigen HE2 DUF971 PF06155.12 ORF119337 - 6.4 7.5 7.5 16 6.2 7.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF971) DUF4529 PF15032.6 ORF119109 - 0.085 12.0 0.1 0.089 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) Chitin_bind_1 PF00187.19 ORF118862 - 0.083 13.4 0.3 0.11 13.0 0.3 1.2 1 0 0 1 1 1 0 Chitin recognition protein DUF3487 PF11990.8 ORF118687 - 0.38 10.7 2.2 0.43 10.5 1.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3487) TMEM239 PF15841.5 ORF118395 - 0.042 13.8 0.2 0.044 13.7 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family PAN_3 PF08277.12 ORF117895 - 0.068 13.0 0.9 0.082 12.7 0.2 1.5 2 0 0 2 2 2 0 PAN-like domain UPF0697 PF15117.6 ORF117886 - 0.0035 17.4 0.0 0.0043 17.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0697 IPI_T4 PF11634.8 ORF117886 - 0.18 11.8 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Nuclease inhibitor from bacteriophage T4 Atg14 PF10186.9 ORF117320 - 0.014 14.5 0.4 0.014 14.5 0.4 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4407 PF14362.6 ORF117320 - 0.022 14.1 1.9 0.023 14.1 1.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) NTS_2 PF15448.6 ORF117320 - 0.09 13.2 0.1 0.11 12.9 0.1 1.2 1 0 0 1 1 1 0 N-terminal segments of P. falciparum erythrocyte membrane protein CbiQ PF02361.16 ORF116996 - 0.52 9.9 6.0 0.55 9.8 6.0 1.0 1 0 0 1 1 1 0 Cobalt transport protein DUF3453 PF11935.8 ORF116473 - 0.012 15.3 0.0 0.012 15.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3453) RAG2_PHD PF13341.6 ORF115853 - 0.46 10.6 7.2 0.44 10.6 0.7 2.1 1 1 1 2 2 2 0 RAG2 PHD domain TT_ORF2 PF02957.15 ORF115770 - 0.19 12.6 1.1 0.24 12.3 1.1 1.1 1 0 0 1 1 1 0 TT viral ORF2 Lep_receptor_Ig PF06328.11 ORF115546 - 0.018 15.0 1.5 0.021 14.8 1.5 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain PriA_3primeBD PF17764.1 ORF115494 - 0.11 12.4 0.1 0.18 11.7 0.1 1.4 1 1 0 1 1 1 0 3′ DNA-binding domain (3′BD) AGA2 PF17366.2 ORF114813 - 0.022 14.4 1.4 0.026 14.2 0.1 1.7 2 0 0 2 2 2 0 A-agglutinin-binding subunit Aga2 PPP5 PF08321.12 ORF114644 - 0.094 13.0 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 PPP5 TPR repeat region 7TM_GPCR_Srv PF10323.9 ORF114051 - 0.00066 19.1 0.8 0.0007 19.0 0.8 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srv Lig_chan PF00060.26 ORF114051 - 0.086 12.7 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 Ligand-gated ion channel Acetyltransf_1 PF00583.25 ORF113909 - 0.0012 19.1 0.1 0.0014 18.9 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 ORF113909 - 0.0022 18.7 0.1 0.0025 18.5 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF113909 - 0.0086 16.0 0.1 0.01 15.8 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 ORF113909 - 0.02 15.0 0.1 0.023 14.8 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain WRC PF08879.10 ORF113700 - 0.061 13.0 3.5 3.3 7.5 0.7 2.4 2 0 0 2 2 2 0 WRC Cytochrom_c3_2 PF14537.6 ORF112758 - 0.044 14.2 0.1 0.05 14.1 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c3 Cnd1_N PF12922.7 ORF112709 - 1.8 8.4 4.3 12 5.7 0.4 2.0 1 1 1 2 2 2 0 non-SMC mitotic condensation complex subunit 1, N-term MORN PF02493.20 ORF112528 - 4.3e-13 48.3 17.2 9.2e-07 28.4 1.5 3.2 3 0 0 3 3 3 3 MORN repeat Hyccin PF09790.9 ORF112259 - 0.053 12.6 2.9 0.058 12.5 2.9 1.0 1 0 0 1 1 1 0 Hyccin IncF PF17626.2 ORF112178 - 0.39 11.1 3.4 6.8 7.1 0.5 2.0 1 1 1 2 2 2 0 Inclusion membrane protein F Zip PF02535.22 ORF112059 - 6.6 5.8 5.2 7.5 5.7 5.2 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter CDC24_OB3 PF17244.2 ORF11160 - 0.07 12.8 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Tmemb_55A PF09788.9 ORF111175 - 0.074 12.1 0.1 0.087 11.9 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 55A WRC PF08879.10 ORF110967 - 0.061 13.0 3.5 3.3 7.5 0.7 2.4 2 0 0 2 2 2 0 WRC DUF5374 PF17344.2 ORF110660 - 0.053 13.4 0.1 0.084 12.8 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5374) Endosulfine PF04667.17 ORF110452 - 0.002 18.2 1.9 0.0024 18.0 1.9 1.2 1 0 0 1 1 1 1 cAMP-regulated phosphoprotein/endosulfine conserved region DUF4462 PF14692.6 ORF110404 - 0.45 10.0 4.6 0.92 9.0 4.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) DUF2070 PF09843.9 ORF110404 - 1.3 7.3 8.2 1.3 7.2 8.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Arm-DNA-bind_5 PF17293.2 ORF110250 - 0.011 16.1 0.3 0.011 16.1 0.3 1.9 2 0 0 2 2 2 0 Arm DNA-binding domain SQS_PSY PF00494.19 ORF109846 - 0.15 11.5 0.0 0.18 11.3 0.0 1.0 1 0 0 1 1 1 0 Squalene/phytoene synthase CDC24_OB3 PF17244.2 ORF109548 - 0.07 12.8 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 DUF4220 PF13968.6 ORF109504 - 0.017 14.6 0.8 0.018 14.5 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) Cyclin_N PF00134.23 ORF109285 - 3.5e-06 26.8 0.1 4.2e-06 26.5 0.1 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain SDF PF00375.18 ORF108619 - 0.14 11.1 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family ETRAMP PF09716.10 ORF108494 - 0.33 11.0 0.6 0.41 10.7 0.5 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) pP_pnuc_1 PF18165.1 ORF108168 - 0.049 13.5 0.0 0.27 11.1 0.0 1.9 1 1 0 1 1 1 0 Predicted pPIWI-associating nuclease Spt46 PF17734.1 ORF107886 - 0.14 11.9 0.2 0.17 11.6 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 PPR_long PF17177.4 ORF107380 - 0.038 13.4 0.1 0.042 13.2 0.1 1.0 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP RELT PF12606.8 ORF107380 - 0.067 12.2 1.5 0.11 11.5 1.5 1.4 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 DUF2270 PF10028.9 ORF106697 - 0.26 10.9 1.8 0.34 10.5 1.8 1.3 1 1 0 1 1 1 0 Predicted integral membrane protein (DUF2270) MR_MLE_C PF13378.6 ORF106266 - 0.0079 15.8 0.0 0.0085 15.7 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like EGF_alliinase PF04863.13 ORF10594 - 0.0091 16.4 3.7 0.014 15.8 3.7 1.2 1 0 0 1 1 1 1 Alliinase EGF-like domain DUF2244 PF10003.9 ORF105031 - 0.093 12.4 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) CxC6 PF18721.1 ORF104869 - 0.075 13.3 2.4 0.1 12.9 2.4 1.3 1 1 0 1 1 1 0 CxC6 like cysteine cluster associated with KDZ transposases Plasmid_parti PF01672.16 ORF104740 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein Plasmid_parti PF01672.16 ORF104259 - 0.013 16.1 0.0 0.015 16.0 0.0 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein ABC_membrane PF00664.23 ORF104063 - 0.0071 16.0 0.7 0.0074 16.0 0.7 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region COQ7 PF03232.13 ORF104063 - 0.18 11.6 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Ubiquinone biosynthesis protein COQ7 ETRAMP PF09716.10 ORF103735 - 0.33 11.0 0.6 0.41 10.7 0.5 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) ETRAMP PF09716.10 ORF103713 - 0.33 11.0 0.6 0.41 10.7 0.5 1.3 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF4462 PF14692.6 ORF102989 - 0.45 10.0 4.6 0.92 9.0 4.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) DUF2070 PF09843.9 ORF102989 - 1.3 7.3 8.2 1.3 7.2 8.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) HlyIII PF03006.20 ORF102514 - 0.029 14.1 0.4 0.029 14.1 0.4 1.1 1 0 0 1 1 1 0 Haemolysin-III related Colipase PF01114.18 ORF102392 - 0.13 12.0 0.6 0.24 11.1 0.3 1.6 2 0 0 2 2 2 0 Colipase, N-terminal domain ABC2_membrane PF01061.24 ORF102285 - 0.084 12.3 7.6 0.084 12.3 7.6 1.0 1 0 0 1 1 1 0 ABC-2 type transporter Arm-DNA-bind_5 PF17293.2 ORF101949 - 0.011 16.1 0.3 0.011 16.1 0.3 1.9 2 0 0 2 2 2 0 Arm DNA-binding domain DUF4462 PF14692.6 ORF101839 - 0.45 10.0 4.6 0.92 9.0 4.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) DUF2070 PF09843.9 ORF101839 - 1.3 7.3 8.2 1.3 7.2 8.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FG-GAP PF01839.23 ORF101821 - 0.071 13.3 0.0 0.092 12.9 0.0 1.2 1 0 0 1 1 1 0 FG-GAP repeat TraG-D_C PF12696.7 ORF101478 - 0.29 11.1 3.0 0.32 11.0 3.0 1.1 1 0 0 1 1 1 0 TraM recognition site of TraD and TraG ETRAMP PF09716.10 ORF10144 - 6.3 6.9 8.4 16 5.6 2.3 2.1 1 1 1 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) DUF5427 PF10310.9 ORF100570 - 0.13 11.2 0.2 0.15 11.0 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5427) Peptidase_M1_N PF17900.1 NODE_74882_length_211_cov_0.892045_g66941_i0forward_frame_1 - 0.11 12.6 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Peptidase M1 N-terminal domain SASRP1 PF15160.6 NODE_74878_length_211_cov_0.903409_g66937_i0reverse_frame_1 - 0.13 11.9 1.6 0.15 11.7 1.6 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 DUF5582 PF17819.1 NODE_74878_length_211_cov_0.903409_g66937_i0forward_frame_1 - 0.042 14.3 0.0 0.059 13.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5582) DUF5586 PF17824.1 NODE_74878_length_211_cov_0.903409_g66937_i0forward_frame_1 - 0.042 13.0 0.0 0.042 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5586) PNPase_C PF12111.8 NODE_74869_length_211_cov_0.903409_g66928_i0forward_frame_1 - 0.089 12.2 0.2 0.14 11.6 0.2 1.3 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal DUF2487 PF10673.9 NODE_74865_length_211_cov_0.909091_g66924_i0forward_frame_1 - 0.016 15.2 0.0 0.018 15.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2487) hnRNP_Q_AcD PF18360.1 NODE_74851_length_211_cov_0.909091_g66910_i0forward_frame_1 - 0.12 12.3 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain ORMDL PF04061.14 NODE_74850_length_211_cov_0.909091_g66909_i0reverse_frame_1 - 0.041 13.7 0.1 0.057 13.2 0.0 1.3 1 1 0 1 1 1 0 ORMDL family DSL PF01414.19 NODE_74850_length_211_cov_0.909091_g66909_i0forward_frame_1 - 0.14 12.5 4.4 0.17 12.2 4.4 1.3 1 0 0 1 1 1 0 Delta serrate ligand Adeno_E3_CR2 PF02439.15 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.00083 19.1 4.6 0.00083 19.1 4.6 2.2 2 0 0 2 2 2 1 Adenovirus E3 region protein CR2 TMEM154 PF15102.6 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.058 13.3 1.5 0.065 13.1 1.5 1.1 1 0 0 1 1 1 0 TMEM154 protein family HemY_N PF07219.13 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.064 13.5 1.0 0.07 13.3 1.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus RCR PF12273.8 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.11 13.2 2.1 0.15 12.7 2.1 1.3 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red EphA2_TM PF14575.6 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.18 12.7 3.6 0.22 12.4 3.0 1.6 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain ODV-E18 PF10717.9 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 0.57 10.1 3.9 0.73 9.7 3.9 1.1 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Protocadherin PF08374.11 NODE_74848_length_211_cov_0.909091_g66907_i0forward_frame_1 - 5.2 7.0 4.4 6.4 6.7 4.4 1.1 1 0 0 1 1 1 0 Protocadherin Herpes_pp85 PF04637.12 NODE_74847_length_211_cov_0.914773_g66906_i0forward_frame_1 - 0.07 11.5 0.1 0.072 11.5 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) 7TM_GPCR_Sra PF02117.16 NODE_74845_length_211_cov_0.954545_g66904_i0reverse_frame_1 - 0.0096 14.8 1.4 0.011 14.5 1.4 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Sra Glyc_hyd_38C_2 PF18230.1 NODE_74844_length_211_cov_0.965909_g66903_i0forward_frame_1 - 0.067 13.3 0.0 0.084 13.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal sub-domain TM231 PF10149.9 NODE_74834_length_211_cov_1.068182_g66893_i0forward_frame_1 - 0.03 13.6 0.1 0.032 13.6 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 231 Pentapeptide PF00805.22 NODE_74827_length_211_cov_1.107955_g66886_i0reverse_frame_1 - 0.031 13.9 0.1 0.043 13.5 0.1 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (8 copies) Sugar_tr PF00083.24 NODE_74826_length_211_cov_1.107955_g66885_i0forward_frame_1 - 6.3e-07 28.6 1.9 0.0067 15.3 0.5 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 NODE_74826_length_211_cov_1.107955_g66885_i0forward_frame_1 - 0.015 14.3 2.2 0.016 14.1 2.2 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily ThrE_2 PF12821.7 NODE_74826_length_211_cov_1.107955_g66885_i0forward_frame_1 - 0.02 15.0 0.1 0.02 15.0 0.1 1.1 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE Nup88 PF10168.9 NODE_74823_length_211_cov_1.125000_g66882_i0forward_frame_1 - 0.078 10.8 0.0 0.078 10.8 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore component DUF4830 PF16112.5 NODE_74821_length_211_cov_1.130682_g66880_i0reverse_frame_1 - 0.033 14.7 0.0 0.036 14.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Crr6 PF08847.11 NODE_74818_length_211_cov_1.136364_g66877_i0reverse_frame_1 - 0.14 11.8 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Chlororespiratory reduction 6 zf-dskA_traR PF01258.17 NODE_74817_length_211_cov_1.136364_g66876_i0forward_frame_1 - 0.11 12.5 0.6 0.17 11.8 0.1 1.6 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger CtsR_C PF17727.1 NODE_74815_length_211_cov_1.147727_g66874_i0forward_frame_1 - 0.2 11.8 0.0 0.27 11.4 0.0 1.2 1 0 0 1 1 1 0 CtsR C-terminal dimerization domain MipZ PF09140.11 NODE_74806_length_211_cov_1.204545_g66865_i0forward_frame_1 - 0.038 13.3 0.0 0.04 13.2 0.0 1.1 1 0 0 1 1 1 0 ATPase MipZ CAAD PF14159.6 NODE_74806_length_211_cov_1.204545_g66865_i0forward_frame_1 - 0.13 12.1 0.3 0.16 11.8 0.3 1.1 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase nec1 PF10379.9 NODE_74804_length_211_cov_1.215909_g66863_i0forward_frame_1 - 0.051 13.1 0.0 0.053 13.0 0.0 1.1 1 0 0 1 1 1 0 Virulence protein nec1 DUF4672 PF15716.5 NODE_74795_length_211_cov_1.272727_g66854_i0forward_frame_1 - 0.22 11.1 0.2 0.27 10.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) Ig_C17orf99 PF17736.1 NODE_74794_length_211_cov_1.295455_g66853_i0reverse_frame_1 - 0.031 14.3 0.2 0.081 13.0 0.1 1.7 1 1 1 2 2 2 0 C17orf99 Ig domain Ribosomal_L19e PF01280.20 NODE_74791_length_211_cov_1.306818_g66850_i0reverse_frame_1 - 0.0065 16.5 0.0 0.0073 16.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L19e RPAP2_Rtr1 PF04181.13 NODE_74791_length_211_cov_1.306818_g66850_i0reverse_frame_1 - 0.013 15.8 0.0 0.041 14.2 0.0 1.7 1 1 0 1 1 1 0 Rtr1/RPAP2 family HATPase_c_2 PF13581.6 NODE_74782_length_211_cov_1.357955_g66841_i0reverse_frame_1 - 0.061 13.3 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Dmrt1 PF12374.8 NODE_74779_length_211_cov_1.357955_g66838_i0forward_frame_1 - 0.085 13.3 2.8 0.16 12.5 2.8 1.5 1 1 0 1 1 1 0 Double-sex mab3 related transcription factor 1 DUF3629 PF12302.8 NODE_74775_length_211_cov_1.363636_g66834_i0forward_frame_1 - 0.082 12.3 0.2 0.089 12.2 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3629) 7TM_GPCR_Sra PF02117.16 NODE_74769_length_211_cov_1.363636_g66828_i0reverse_frame_1 - 0.051 12.4 4.8 0.056 12.3 4.8 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sra DUF5362 PF17319.2 NODE_74767_length_211_cov_1.363636_g66826_i0reverse_frame_1 - 0.008 16.0 0.1 0.009 15.8 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5362) SecD_SecF PF02355.16 NODE_74766_length_211_cov_1.363636_g66825_i0forward_frame_1 - 0.026 13.9 2.4 0.028 13.8 2.4 1.0 1 0 0 1 1 1 0 Protein export membrane protein PLAC8 PF04749.17 NODE_74763_length_211_cov_1.386364_g66822_i0reverse_frame_1 - 0.038 15.0 2.5 0.041 14.9 2.5 1.1 1 0 0 1 1 1 0 PLAC8 family Peptidase_M44 PF03410.13 NODE_74763_length_211_cov_1.386364_g66822_i0forward_frame_1 - 0.034 12.7 2.1 0.037 12.6 2.1 1.0 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox TMEM70 PF06979.12 NODE_74752_length_211_cov_1.454545_g66811_i0forward_frame_1 - 0.061 13.7 0.2 0.073 13.5 0.2 1.1 1 0 0 1 1 1 0 Assembly, mitochondrial proton-transport ATP synth complex GBR2_CC PF18455.1 NODE_74744_length_211_cov_1.522727_g66803_i0forward_frame_1 - 0.02 15.0 1.0 0.03 14.4 1.0 1.3 1 0 0 1 1 1 0 Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain CaATP_NAI PF12515.8 NODE_74736_length_211_cov_1.556818_g66795_i0forward_frame_1 - 0.16 11.6 1.5 0.17 11.5 0.1 1.7 2 0 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain DUF4519 PF15012.6 NODE_74730_length_211_cov_1.585227_g66789_i0forward_frame_1 - 0.26 11.5 0.3 0.26 11.5 0.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4519) BatA PF07584.11 NODE_74728_length_211_cov_1.590909_g66787_i0forward_frame_1 - 0.048 14.0 0.1 0.056 13.8 0.1 1.1 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal Zip PF02535.22 NODE_74725_length_211_cov_1.607955_g66784_i0forward_frame_1 - 0.012 14.9 6.7 0.013 14.8 6.7 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter V_ATPase_I PF01496.19 NODE_74725_length_211_cov_1.607955_g66784_i0forward_frame_1 - 0.028 12.4 0.8 0.03 12.3 0.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NicO PF03824.16 NODE_74725_length_211_cov_1.607955_g66784_i0forward_frame_1 - 2.2 7.6 14.8 2.6 7.3 14.8 1.2 1 0 0 1 1 1 0 High-affinity nickel-transport protein KRAB PF01352.27 NODE_74717_length_211_cov_1.664773_g66776_i0forward_frame_1 - 0.094 12.4 0.0 0.19 11.4 0.0 1.6 1 0 0 1 1 1 0 KRAB box Myb_DNA-binding PF00249.31 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 4e-16 58.9 0.5 4e-11 42.9 0.1 2.0 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 2.4e-13 50.1 2.7 6.7e-07 29.5 0.2 2.0 1 1 1 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 0.003 17.4 0.4 0.0049 16.7 0.2 1.4 1 1 1 2 2 2 1 Myb DNA-binding like SANT_DAMP1_like PF16282.5 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 0.0072 16.5 0.1 0.0086 16.3 0.1 1.3 1 0 0 1 1 1 1 SANT/Myb-like domain of DAMP1 Myb_DNA-bind_5 PF13873.6 NODE_74716_length_211_cov_1.670455_g66775_i0forward_frame_1 - 0.029 14.5 0.4 0.48 10.5 0.1 2.3 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain PDH_E1_M PF17831.1 NODE_74714_length_211_cov_1.693182_g66773_i0reverse_frame_1 - 0.2 11.2 0.7 0.22 11.0 0.7 1.1 1 0 0 1 1 1 0 Pyruvate dehydrogenase E1 component middle domain Pkinase PF00069.25 NODE_74709_length_211_cov_1.721591_g66768_i0forward_frame_1 - 6e-10 38.9 0.0 6e-10 38.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain UCH PF00443.29 NODE_74703_length_211_cov_1.784091_g66762_i0reverse_frame_1 - 4.5e-10 39.5 0.1 5.7e-10 39.1 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase TRP PF06011.12 NODE_74702_length_211_cov_1.784091_g66761_i0reverse_frame_1 - 0.0052 15.6 1.7 0.0052 15.6 1.7 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF2664 PF10867.8 NODE_74699_length_211_cov_1.795455_g66758_i0reverse_frame_1 - 0.0017 18.8 0.1 0.0017 18.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2664) Neurokinin_B PF03823.14 NODE_74696_length_211_cov_1.806818_g66755_i0forward_frame_1 - 0.0064 16.5 0.1 0.0094 16.0 0.1 1.3 1 0 0 1 1 1 1 Neurokinin B HeH PF12949.7 NODE_74695_length_211_cov_1.806818_g66754_i0reverse_frame_1 - 0.037 13.7 0.1 0.056 13.2 0.1 1.3 1 0 0 1 1 1 0 HeH/LEM domain CRAL_TRIO PF00650.20 NODE_74694_length_211_cov_1.818182_g66753_i0reverse_frame_1 - 1.1e-07 31.7 0.0 1.1e-07 31.7 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain FSA_C PF10479.9 NODE_74692_length_211_cov_1.835227_g66751_i0reverse_frame_1 - 0.49 8.5 8.1 0.51 8.4 8.1 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Mucin PF01456.17 NODE_74692_length_211_cov_1.835227_g66751_i0reverse_frame_1 - 0.96 9.4 19.2 1.2 9.1 19.2 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein COX8 PF02285.15 NODE_74689_length_211_cov_1.869318_g66748_i0reverse_frame_1 - 0.022 14.6 4.0 0.022 14.6 4.0 1.8 2 0 0 2 2 2 0 Cytochrome oxidase c subunit VIII DndE PF08870.11 NODE_74689_length_211_cov_1.869318_g66748_i0reverse_frame_1 - 0.03 14.6 0.0 0.037 14.3 0.0 1.1 1 0 0 1 1 1 0 DNA sulphur modification protein DndE cNMP_binding PF00027.29 NODE_74683_length_211_cov_1.914773_g66742_i0forward_frame_1 - 0.029 14.5 0.0 0.034 14.2 0.0 1.2 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Pkinase PF00069.25 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 2.4e-20 73.0 0.8 2.5e-20 73.0 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 1.1e-14 54.3 0.1 1.3e-14 54.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.0011 18.3 0.1 0.0011 18.3 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.0013 18.1 0.1 0.0013 18.1 0.1 1.0 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.0059 15.4 0.2 0.0061 15.4 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.0073 15.3 0.4 0.0085 15.1 0.4 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 NODE_74681_length_211_cov_1.926136_g66740_i0reverse_frame_1 - 0.023 13.8 0.1 0.023 13.7 0.1 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 DCB PF16213.5 NODE_74680_length_211_cov_1.926136_g66739_i0reverse_frame_1 - 8.4e-06 25.6 0.6 9.7e-06 25.4 0.6 1.0 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 DUF1035 PF06281.12 NODE_74673_length_211_cov_2.000000_g66732_i0forward_frame_1 - 2.9 8.0 8.4 0.8 9.8 4.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1035) DUF5094 PF17015.5 NODE_74672_length_211_cov_2.005682_g66731_i0reverse_frame_1 - 0.11 12.6 1.7 0.12 12.4 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5094) Receptor_IA-2 PF11548.8 NODE_74669_length_211_cov_2.028409_g66728_i0reverse_frame_1 - 0.12 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase receptor IA-2 tRNA_bind_2 PF13725.6 NODE_74667_length_211_cov_2.034091_g66726_i0forward_frame_1 - 0.37 10.5 3.3 0.38 10.4 3.3 1.0 1 0 0 1 1 1 0 Possible tRNA binding domain Ribosomal_L24e PF01246.20 NODE_74663_length_211_cov_2.090909_g66722_i0reverse_frame_1 - 0.026 14.8 0.6 0.036 14.3 0.2 1.5 2 0 0 2 2 2 0 Ribosomal protein L24e Ldr_toxin PF13940.6 NODE_74661_length_211_cov_2.119318_g66720_i0reverse_frame_1 - 0.12 12.5 0.2 0.18 11.9 0.2 1.4 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system PRIMA1 PF16101.5 NODE_74660_length_211_cov_2.119318_g66719_i0forward_frame_1 - 1.7 8.7 6.4 1.8 8.6 6.4 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 THEG4 PF15834.5 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 0.31 11.0 2.5 0.34 10.9 2.5 1.0 1 0 0 1 1 1 0 Testis highly expressed protein 4 DUF1387 PF07139.11 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 4.9 6.8 21.9 5.4 6.7 21.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1387) MscS_TM PF12794.7 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 5.2 5.8 7.1 5.5 5.7 7.1 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 FAM176 PF14851.6 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 6.6 6.4 14.3 7.4 6.2 14.3 1.1 1 0 0 1 1 1 0 FAM176 family DUF3464 PF11947.8 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 6.7 6.5 15.0 6.8 6.4 15.0 1.2 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Eapp_C PF10238.9 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 7.9 6.5 11.2 8.3 6.5 11.2 1.2 1 0 0 1 1 1 0 E2F-associated phosphoprotein AP3D1 PF06375.11 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 8.9 6.5 26.3 10 6.3 26.3 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 MAP17 PF15807.5 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_1 - 9.3 6.5 11.3 9.9 6.4 11.3 1.3 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 WD40 PF00400.32 NODE_74650_length_211_cov_2.232955_g66709_i0forward_frame_1 - 1.2e-06 29.1 0.2 0.06 14.2 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat COG5 PF10392.9 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.019 15.1 0.4 0.023 14.8 0.4 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 UPF0242 PF06785.11 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.021 14.9 0.4 0.047 13.8 0.4 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Fib_alpha PF08702.10 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.026 14.7 1.0 0.066 13.4 1.0 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family Spc42p PF11544.8 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.053 13.5 2.0 6.7 6.8 0.1 2.2 2 0 0 2 2 2 0 Spindle pole body component Spc42p DUF4407 PF14362.6 NODE_74646_length_211_cov_2.255682_g66705_i0reverse_frame_1 - 0.12 11.7 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Peptidase_M1 PF01433.20 NODE_74638_length_211_cov_2.329545_g66697_i0reverse_frame_1 - 8.5e-25 87.6 0.5 8.9e-25 87.5 0.5 1.0 1 0 0 1 1 1 1 Peptidase family M1 domain 7TM_GPCR_Srz PF10325.9 NODE_74638_length_211_cov_2.329545_g66697_i0forward_frame_1 - 0.0014 18.0 0.5 0.0015 17.9 0.5 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srz OSCP PF00213.18 NODE_74637_length_211_cov_2.443182_g66696_i0forward_frame_1 - 9e-09 35.7 0.5 1e-08 35.5 0.5 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit Nucleos_tra2_C PF07662.13 NODE_74634_length_211_cov_2.562500_g66693_i0forward_frame_1 - 9.7e-19 68.0 2.6 1.1e-18 67.9 2.6 1.0 1 0 0 1 1 1 1 Na+ dependent nucleoside transporter C-terminus DUF2686 PF10887.8 NODE_74622_length_211_cov_2.732955_g66681_i0reverse_frame_1 - 0.00015 20.9 0.1 0.00019 20.5 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2686) Lamprin PF06403.11 NODE_74615_length_211_cov_2.863636_g66674_i0forward_frame_1 - 2.8 7.9 7.0 0.38 10.7 2.1 1.8 1 1 1 2 2 2 0 Lamprin PilN_bio_d PF18222.1 NODE_74614_length_211_cov_2.909091_g66673_i0forward_frame_1 - 0.12 12.8 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 PilN biogenesis protein dimerization domain Clc-like PF07062.12 NODE_74614_length_211_cov_2.909091_g66673_i0forward_frame_1 - 0.14 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Clc-like GDP_Man_Dehyd PF16363.5 NODE_74609_length_211_cov_3.181818_g66668_i0reverse_frame_1 - 3.9e-10 39.6 0.0 4.3e-10 39.5 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 NODE_74609_length_211_cov_3.181818_g66668_i0reverse_frame_1 - 1.3e-07 31.4 0.0 1.4e-07 31.2 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 NODE_74609_length_211_cov_3.181818_g66668_i0reverse_frame_1 - 0.12 11.5 0.0 0.14 11.3 0.0 1.0 1 0 0 1 1 1 0 Male sterility protein Mt_ATP-synt_B PF05405.14 NODE_74598_length_211_cov_6.698864_g66657_i0forward_frame_1 - 0.024 14.3 0.2 0.031 13.9 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) RNA_pol_Rpo13 PF12136.8 NODE_74596_length_211_cov_8.267045_g66655_i0forward_frame_1 - 0.084 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpo13 subunit HTH domain DUF448 PF04296.13 NODE_74591_length_211_cov_23.295455_g66650_i0reverse_frame_1 - 0.16 11.8 0.3 0.48 10.3 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF448) RseC_MucC PF04246.12 NODE_74591_length_211_cov_23.295455_g66650_i0reverse_frame_1 - 0.21 11.6 1.2 0.22 11.4 1.2 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC UPF0239 PF06783.11 NODE_74586_length_211_cov_26.750000_g66645_i0reverse_frame_1 - 2.8 8.2 6.5 4.7 7.5 6.5 1.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0239) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks378.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks378.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks378.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks378.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PT PF04886.12 NODE_74577_length_211_cov_37.556818_g66636_i0reverse_frame_1 - 0.022 14.3 1.3 0.038 13.5 1.3 1.4 1 0 0 1 1 1 0 PT repeat EpCAM_N PF18635.1 NODE_74577_length_211_cov_37.556818_g66636_i0reverse_frame_1 - 0.081 13.1 0.3 0.14 12.3 0.0 1.6 2 0 0 2 2 2 0 Epithelial cell adhesion molecule N-terminal domain C_tripleX PF02363.19 NODE_74567_length_211_cov_45.460227_g66626_i0forward_frame_1 - 0.19 12.0 2.5 0.39 11.1 2.5 1.5 1 0 0 1 1 1 0 Cysteine rich repeat Vpu PF00558.19 NODE_74565_length_211_cov_46.511364_g66624_i0reverse_frame_1 - 0.097 12.5 0.1 0.12 12.1 0.1 1.2 1 0 0 1 1 1 0 Vpu protein DUF3716 PF12511.8 NODE_74565_length_211_cov_46.511364_g66624_i0reverse_frame_1 - 0.14 12.2 5.4 0.48 10.5 5.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) S1 PF00575.23 NODE_74545_length_211_cov_69.153409_g66604_i0reverse_frame_1 - 0.059 13.7 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 S1 RNA binding domain CCDC71L PF15374.6 NODE_74541_length_211_cov_71.164773_g66600_i0forward_frame_1 - 0.13 11.5 3.4 0.15 11.3 3.4 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 71L SUIM_assoc PF16619.5 NODE_74541_length_211_cov_71.164773_g66600_i0forward_frame_1 - 1.3 9.2 9.2 0.15 12.1 3.2 1.9 1 1 1 2 2 2 0 Unstructured region C-term to UIM in Ataxin3 JAMP PF05571.12 NODE_74539_length_211_cov_77.551136_g66598_i0reverse_frame_1 - 0.61 9.7 1.0 0.66 9.6 1.0 1.0 1 0 0 1 1 1 0 JNK1/MAPK8-associated membrane protein ADAM17_MPD PF16698.5 NODE_74528_length_211_cov_112.204545_g66587_i0reverse_frame_1 - 0.18 12.2 1.5 0.22 11.9 1.5 1.1 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 DUF434 PF04256.12 NODE_74525_length_211_cov_119.761364_g66584_i0forward_frame_1 - 0.015 14.9 0.0 0.021 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF434) ABC2_membrane_3 PF12698.7 NODE_74519_length_211_cov_162.403409_g66578_i0forward_frame_1 - 0.094 11.8 1.0 0.087 11.9 1.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein PRIMA1 PF16101.5 NODE_74514_length_211_cov_274.193182_g66573_i0forward_frame_1 - 0.042 13.9 1.8 0.062 13.3 1.8 1.3 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Birna_RdRp PF04197.12 NODE_74510_length_211_cov_4309.625000_g66569_i0forward_frame_1 - 0.13 10.6 0.1 0.16 10.3 0.1 1.0 1 0 0 1 1 1 0 Birnavirus RNA dependent RNA polymerase (VP1) ToxB_N PF18224.1 NODE_74504_length_212_cov_0.892655_g66563_i0forward_frame_1 - 0.11 12.4 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 ToxB N-terminal domain YjcB PF15940.5 NODE_74491_length_212_cov_0.903955_g66550_i0reverse_frame_1 - 0.081 13.1 0.0 0.095 12.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function DUF3914 PF13053.6 NODE_74480_length_212_cov_0.903955_g66539_i0reverse_frame_1 - 0.03 14.6 0.1 0.031 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3914) TPP_enzyme_C PF02775.21 NODE_74475_length_212_cov_0.915254_g66534_i0forward_frame_1 - 0.14 11.9 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DUF3530 PF12048.8 NODE_74474_length_212_cov_0.920904_g66533_i0reverse_frame_1 - 0.11 11.9 3.3 0.12 11.7 3.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) DUF2749 PF10907.8 NODE_74474_length_212_cov_0.920904_g66533_i0forward_frame_1 - 4.2 7.6 12.2 8.7 6.6 12.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2749) DUF677 PF05055.12 NODE_74474_length_212_cov_0.920904_g66533_i0forward_frame_1 - 8.3 5.2 6.1 8.2 5.2 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF677) DUF624 PF04854.14 NODE_74470_length_212_cov_0.960452_g66529_i0reverse_frame_1 - 0.23 11.6 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF624 PTN_MK_N PF05196.13 NODE_74466_length_212_cov_1.000000_g66525_i0reverse_frame_1 - 0.0024 18.1 0.8 0.0033 17.6 0.8 1.3 1 0 0 1 1 1 1 PTN/MK heparin-binding protein family, N-terminal domain DUF5009 PF16401.5 NODE_74462_length_212_cov_1.045198_g66521_i0reverse_frame_1 - 0.19 11.2 0.0 0.22 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) zf-C3HC PF07967.13 NODE_74456_length_212_cov_1.107345_g66515_i0forward_frame_1 - 0.011 15.8 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 0 C3HC zinc finger-like Thioredoxin_3 PF13192.6 NODE_74453_length_212_cov_1.124294_g66512_i0reverse_frame_1 - 0.13 12.3 0.0 0.65 10.1 0.0 1.8 2 0 0 2 2 2 0 Thioredoxin domain DUF1478 PF07349.11 NODE_74451_length_212_cov_1.124294_g66510_i0reverse_frame_1 - 0.036 14.0 0.7 0.041 13.8 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1478) DegS PF05384.11 NODE_74449_length_212_cov_1.129944_g66508_i0reverse_frame_1 - 0.021 14.3 0.1 0.023 14.2 0.1 1.0 1 0 0 1 1 1 0 Sensor protein DegS Arylesterase PF01731.20 NODE_74446_length_212_cov_1.129944_g66505_i0forward_frame_1 - 0.015 15.5 0.4 0.017 15.3 0.4 1.2 1 0 0 1 1 1 0 Arylesterase Pombe_5TM PF09437.10 NODE_74446_length_212_cov_1.129944_g66505_i0forward_frame_1 - 0.041 13.5 3.5 0.045 13.4 3.5 1.0 1 0 0 1 1 1 0 Pombe specific 5TM protein DUF2682 PF10909.8 NODE_74446_length_212_cov_1.129944_g66505_i0forward_frame_1 - 0.049 14.1 0.4 0.057 13.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2682) Lamprin PF06403.11 NODE_74444_length_212_cov_1.129944_g66503_i0forward_frame_1 - 0.029 14.3 9.7 0.11 12.4 4.4 2.0 1 1 1 2 2 2 0 Lamprin Chorion_1 PF01723.16 NODE_74444_length_212_cov_1.129944_g66503_i0forward_frame_1 - 0.054 13.5 7.9 0.12 12.3 7.9 1.7 1 1 0 1 1 1 0 Chorion protein Fer4_22 PF17179.4 NODE_74442_length_212_cov_1.129944_g66501_i0reverse_frame_1 - 0.0072 17.1 0.6 0.0079 17.0 0.6 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain zf-RRPl_C4 PF17026.5 NODE_74442_length_212_cov_1.129944_g66501_i0reverse_frame_1 - 0.021 14.9 0.1 0.023 14.8 0.1 1.1 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type DUF267 PF03268.14 NODE_74439_length_212_cov_1.146893_g66498_i0forward_frame_1 - 0.0029 16.5 2.7 0.003 16.5 2.7 1.0 1 0 0 1 1 1 1 Caenorhabditis protein of unknown function, DUF267 DUF3671 PF12420.8 NODE_74439_length_212_cov_1.146893_g66498_i0forward_frame_1 - 0.039 14.0 2.3 0.046 13.8 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function AAA_lid_7 PF17867.1 NODE_74437_length_212_cov_1.152542_g66496_i0forward_frame_1 - 0.096 12.9 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Midasin AAA lid domain 7tm_1 PF00001.21 NODE_74432_length_212_cov_1.214689_g66491_i0forward_frame_1 - 0.045 13.1 0.3 0.047 13.0 0.3 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) T4-Gluco-transf PF09198.10 NODE_74426_length_212_cov_1.254237_g66485_i0forward_frame_1 - 0.035 13.7 0.4 0.051 13.2 0.4 1.3 1 0 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase RadC PF04002.15 NODE_74426_length_212_cov_1.254237_g66485_i0forward_frame_1 - 0.15 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 RadC-like JAB domain Retrotran_gag_2 PF14223.6 NODE_74423_length_212_cov_1.276836_g66482_i0reverse_frame_1 - 7.6e-05 22.4 0.0 8.7e-05 22.2 0.0 1.0 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type Helo_like_N PF17111.5 NODE_74422_length_212_cov_1.322034_g66481_i0forward_frame_1 - 0.079 12.3 1.7 0.14 11.6 1.7 1.4 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins PRT_C PF08372.10 NODE_74406_length_212_cov_1.355932_g66465_i0reverse_frame_1 - 1.1 9.0 4.7 1.2 8.9 4.7 1.1 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal TcdB_N PF12918.7 NODE_74404_length_212_cov_1.355932_g66463_i0forward_frame_1 - 0.0046 17.2 0.6 0.0064 16.8 0.6 1.3 1 0 0 1 1 1 1 TcdB toxin N-terminal helical domain PUB PF09409.10 NODE_74404_length_212_cov_1.355932_g66463_i0forward_frame_1 - 0.055 13.4 0.2 0.066 13.2 0.2 1.1 1 0 0 1 1 1 0 PUB domain JMY PF15871.5 NODE_74404_length_212_cov_1.355932_g66463_i0forward_frame_1 - 0.059 12.7 0.0 0.064 12.6 0.0 1.0 1 0 0 1 1 1 0 Junction-mediating and -regulatory protein Spo7 PF03907.13 NODE_74392_length_212_cov_1.418079_g66451_i0reverse_frame_1 - 0.018 14.5 0.4 0.023 14.2 0.4 1.1 1 0 0 1 1 1 0 Spo7-like protein Tetraspanin PF00335.20 NODE_74390_length_212_cov_1.423729_g66449_i0reverse_frame_1 - 1.4 8.6 5.1 1.5 8.5 5.1 1.1 1 0 0 1 1 1 0 Tetraspanin family TolA_bind_tri PF16331.5 NODE_74381_length_212_cov_1.474576_g66440_i0forward_frame_1 - 2.2e-06 27.6 3.7 3.1e-06 27.2 3.7 1.2 1 0 0 1 1 1 1 TolA binding protein trimerisation zf-C2H2_7 PF15269.6 NODE_74364_length_212_cov_1.576271_g66423_i0forward_frame_1 - 0.12 12.5 0.9 1.1 9.4 0.1 2.2 1 1 1 2 2 2 0 Zinc-finger Borrelia_orfX PF04160.12 NODE_74362_length_212_cov_1.576271_g66421_i0reverse_frame_1 - 0.047 13.7 4.7 0.058 13.4 4.7 1.1 1 0 0 1 1 1 0 Orf-X protein DpnII-MboI PF18742.1 NODE_74362_length_212_cov_1.576271_g66421_i0forward_frame_1 - 0.00017 21.3 0.2 0.00018 21.2 0.2 1.1 1 0 0 1 1 1 1 REase_DpnII-MboI Anthrax_toxA PF03497.16 NODE_74361_length_212_cov_1.576271_g66420_i0forward_frame_1 - 0.2 11.8 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 Anthrax toxin LF subunit HisK_N PF09385.10 NODE_74353_length_212_cov_1.581921_g66412_i0forward_frame_1 - 0.063 13.2 0.5 0.079 12.9 0.5 1.1 1 0 0 1 1 1 0 Histidine kinase N terminal Cyclase PF04199.13 NODE_74348_length_212_cov_1.649718_g66407_i0forward_frame_1 - 0.13 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Putative cyclase PPR PF01535.20 NODE_74343_length_212_cov_1.683616_g66402_i0forward_frame_1 - 0.12 12.7 0.2 0.27 11.6 0.2 1.6 1 0 0 1 1 1 0 PPR repeat COX_ARM PF06481.14 NODE_74340_length_212_cov_1.711864_g66399_i0reverse_frame_1 - 0.036 14.0 0.1 0.048 13.6 0.1 1.1 1 0 0 1 1 1 0 COX Aromatic Rich Motif Flagellar_put PF12611.8 NODE_74340_length_212_cov_1.711864_g66399_i0reverse_frame_1 - 0.093 12.5 0.2 0.14 11.9 0.2 1.3 1 0 0 1 1 1 0 Putative flagellar DUF417 PF04224.12 NODE_74339_length_212_cov_1.717514_g66398_i0forward_frame_1 - 0.077 12.6 0.0 0.078 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF417 PseudoU_synth_2 PF00849.22 NODE_74336_length_212_cov_1.751412_g66395_i0reverse_frame_1 - 8.1e-09 35.8 0.0 8.8e-09 35.7 0.0 1.0 1 0 0 1 1 1 1 RNA pseudouridylate synthase AbiEi_1 PF09407.10 NODE_74334_length_212_cov_1.768362_g66393_i0reverse_frame_1 - 0.095 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 AbiEi antitoxin C-terminal domain Lamprin PF06403.11 NODE_74329_length_212_cov_1.785311_g66388_i0forward_frame_1 - 0.012 15.6 3.8 0.013 15.5 3.8 1.1 1 0 0 1 1 1 0 Lamprin zf_CCCH_4 PF18345.1 NODE_74328_length_212_cov_1.785311_g66387_i0forward_frame_1 - 0.26 11.4 2.7 0.29 11.3 0.9 2.0 2 0 0 2 2 2 0 Zinc finger domain Transketolase_C PF02780.20 NODE_74313_length_212_cov_1.881356_g66372_i0reverse_frame_1 - 0.011 15.6 0.2 0.013 15.3 0.2 1.0 1 0 0 1 1 1 0 Transketolase, C-terminal domain ARA70 PF12489.8 NODE_74312_length_212_cov_1.887006_g66371_i0forward_frame_1 - 0.012 15.8 1.0 0.012 15.8 1.0 1.0 1 0 0 1 1 1 0 Nuclear coactivator FtsL PF04999.13 NODE_74311_length_212_cov_1.898305_g66370_i0reverse_frame_1 - 0.0055 16.7 0.0 0.0063 16.5 0.0 1.0 1 0 0 1 1 1 1 Cell division protein FtsL IlvB_leader PF08049.11 NODE_74306_length_212_cov_1.960452_g66365_i0reverse_frame_1 - 0.093 12.7 2.7 4.7 7.2 0.9 2.3 2 0 0 2 2 2 0 IlvB leader peptide DUF1765 PF08578.10 NODE_74305_length_212_cov_1.983051_g66364_i0reverse_frame_1 - 0.1 13.1 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1765) Flavodoxin_1 PF00258.25 NODE_74303_length_212_cov_1.988701_g66362_i0forward_frame_1 - 0.00058 20.1 0.0 0.00067 19.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin Ninjurin PF04923.12 NODE_74302_length_212_cov_2.005650_g66361_i0reverse_frame_1 - 0.09 12.7 0.4 0.11 12.4 0.4 1.2 1 0 0 1 1 1 0 Ninjurin YhfZ_C PF14503.6 NODE_74301_length_212_cov_2.022599_g66360_i0forward_frame_1 - 0.17 11.4 0.1 0.22 11.1 0.1 1.1 1 0 0 1 1 1 0 YhfZ C-terminal domain YdfZ PF14001.6 NODE_74298_length_212_cov_2.028249_g66357_i0forward_frame_1 - 2.8e-13 50.0 0.1 3.7e-13 49.7 0.1 1.2 1 0 0 1 1 1 1 YdfZ protein RHIM PF12721.7 NODE_74297_length_212_cov_2.045198_g66356_i0forward_frame_1 - 0.028 14.9 0.3 0.041 14.4 0.3 1.3 1 0 0 1 1 1 0 RIP homotypic interaction motif IRK_N PF08466.10 NODE_74295_length_212_cov_2.073446_g66354_i0forward_frame_1 - 0.031 14.4 0.0 0.87 9.8 0.0 2.7 3 1 0 3 3 3 0 Inward rectifier potassium channel N-terminal Phage-A118_gp45 PF10653.9 NODE_74289_length_212_cov_2.107345_g66348_i0forward_frame_1 - 0.17 11.9 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein gp45 of Bacteriophage A118 Ras PF00071.22 NODE_74283_length_212_cov_2.197740_g66342_i0forward_frame_1 - 0.00057 19.5 0.1 0.00057 19.5 0.1 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_74283_length_212_cov_2.197740_g66342_i0forward_frame_1 - 0.059 13.6 0.4 0.47 10.7 0.1 1.9 1 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase CHZ PF09649.10 NODE_74278_length_212_cov_2.254237_g66337_i0forward_frame_1 - 0.071 12.6 0.2 0.1 12.1 0.2 1.2 1 0 0 1 1 1 0 Histone chaperone domain CHZ DUF1952 PF09189.10 NODE_74273_length_212_cov_2.350282_g66332_i0forward_frame_1 - 0.14 12.0 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1952) IQCJ-SCHIP1 PF15157.6 NODE_74272_length_212_cov_2.350282_g66331_i0forward_frame_1 - 0.11 12.4 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif DUF1676 PF07898.13 NODE_74270_length_212_cov_2.463277_g66329_i0reverse_frame_1 - 0.2 11.7 7.3 0.22 11.5 7.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF5090 PF17009.5 NODE_74264_length_212_cov_2.536723_g66323_i0forward_frame_1 - 0.32 10.9 3.7 0.34 10.8 3.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF5470 PF17564.2 NODE_74261_length_212_cov_2.559322_g66320_i0forward_frame_1 - 1.1 9.5 5.2 0.43 10.8 3.1 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5470) SR-25 PF10500.9 NODE_74260_length_212_cov_2.593220_g66319_i0forward_frame_1 - 0.69 9.5 7.4 0.75 9.4 7.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Defensin_big PF14862.6 NODE_74258_length_212_cov_2.615819_g66317_i0reverse_frame_1 - 0.036 14.4 1.4 0.052 13.9 1.1 1.5 1 1 0 1 1 1 0 Big defensin CRIC_ras_sig PF10534.9 NODE_74257_length_212_cov_2.677966_g66316_i0reverse_frame_1 - 0.026 14.7 0.2 0.03 14.5 0.2 1.2 1 0 0 1 1 1 0 Connector enhancer of kinase suppressor of ras Ecm33 PF12454.8 NODE_74254_length_212_cov_2.757062_g66313_i0forward_frame_1 - 1.1 9.5 2.8 1.3 9.2 0.1 2.1 1 1 1 2 2 2 0 GPI-anchored cell wall organization protein Lamprin PF06403.11 NODE_74247_length_212_cov_2.898305_g66306_i0forward_frame_1 - 0.072 13.1 2.5 0.096 12.6 2.5 1.2 1 0 0 1 1 1 0 Lamprin Syntaphilin PF15290.6 NODE_74241_length_212_cov_3.135593_g66300_i0reverse_frame_1 - 0.67 9.5 3.2 0.75 9.4 3.2 1.0 1 0 0 1 1 1 0 Golgi-localised syntaxin-1-binding clamp Lipoprotein_3 PF00938.17 NODE_74224_length_212_cov_17.237288_g66283_i0reverse_frame_1 - 0.15 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Lipoprotein OHCU_decarbox PF09349.10 NODE_74219_length_212_cov_31.988701_g66278_i0reverse_frame_1 - 0.06 13.8 0.1 0.063 13.8 0.1 1.1 1 0 0 1 1 1 0 OHCU decarboxylase ETRAMP PF09716.10 NODE_74212_length_212_cov_38.203390_g66271_i0forward_frame_1 - 0.13 12.4 0.2 0.14 12.3 0.2 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Siva PF05458.12 NODE_74211_length_212_cov_38.384181_g66270_i0forward_frame_1 - 0.025 14.3 12.3 0.024 14.3 12.3 1.0 1 0 0 1 1 1 0 Cd27 binding protein (Siva) zf-LITAF-like PF10601.9 NODE_74210_length_212_cov_39.152542_g66269_i0forward_frame_1 - 0.18 12.1 5.2 0.27 11.5 5.2 1.3 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain PHF12_MRG_bd PF16737.5 NODE_74208_length_212_cov_40.943503_g66267_i0forward_frame_1 - 0.031 14.0 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 PHD finger protein 12 MRG binding domain PAN_3 PF08277.12 NODE_74208_length_212_cov_40.943503_g66267_i0forward_frame_1 - 0.066 13.0 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 PAN-like domain NLRC4_HD2 PF17776.1 NODE_74202_length_212_cov_47.627119_g66261_i0reverse_frame_1 - 0.064 13.8 0.1 0.065 13.8 0.1 1.1 1 0 0 1 1 1 0 NLRC4 helical domain HD2 Ank_5 PF13857.6 NODE_74195_length_212_cov_53.813559_g66254_i0reverse_frame_1 - 0.11 12.8 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (many copies) T2SS-T3SS_pil_N PF13629.6 NODE_74183_length_212_cov_72.745763_g66242_i0forward_frame_1 - 0.14 11.9 0.0 0.23 11.2 0.0 1.3 1 1 0 1 1 1 0 Pilus formation protein N terminal region ATP_Ca_trans_C PF12424.8 NODE_74179_length_212_cov_81.915254_g66238_i0forward_frame_1 - 0.15 12.6 0.0 0.23 11.9 0.0 1.5 2 0 0 2 2 2 0 Plasma membrane calcium transporter ATPase C terminal Salp15 PF12115.8 NODE_74178_length_212_cov_84.836158_g66237_i0reverse_frame_1 - 0.048 14.1 0.4 0.061 13.8 0.4 1.1 1 0 0 1 1 1 0 Salivary protein of 15kDa inhibits CD4+ T cell activation SCO1-SenC PF02630.14 NODE_74178_length_212_cov_84.836158_g66237_i0reverse_frame_1 - 0.061 13.2 0.3 0.076 12.9 0.3 1.1 1 0 0 1 1 1 0 SCO1/SenC DUF5338 PF17273.2 NODE_74177_length_212_cov_85.649718_g66236_i0reverse_frame_1 - 0.19 11.8 0.0 0.26 11.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5338) Transmemb_17 PF09799.9 NODE_74171_length_212_cov_115.508475_g66230_i0forward_frame_1 - 0.05 14.2 1.0 0.067 13.8 1.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein ThiC-associated PF13667.6 NODE_74164_length_212_cov_150.576271_g66223_i0reverse_frame_1 - 0.069 13.0 0.9 0.28 11.1 0.9 1.8 1 1 0 1 1 1 0 ThiC-associated domain DDE_Tnp_1_6 PF13751.6 NODE_74162_length_212_cov_161.926554_g66221_i0reverse_frame_1 - 0.072 13.3 2.7 0.091 13.0 2.7 1.2 1 0 0 1 1 1 0 Transposase DDE domain Glyco_hydro_38N PF01074.22 NODE_74158_length_212_cov_190.429379_g66217_i0reverse_frame_1 - 2.7e-08 33.5 0.4 2.7e-08 33.5 0.4 1.4 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain Mu-like_Com PF10122.9 NODE_74152_length_212_cov_1473.175141_g66211_i0forward_frame_1 - 0.061 12.8 0.4 0.061 12.8 0.4 1.8 2 0 0 2 2 2 0 Mu-like prophage protein Com EpCAM_N PF18635.1 NODE_74151_length_212_cov_1907.367232_g66210_i0reverse_frame_1 - 0.0033 17.6 0.4 0.0033 17.6 0.4 2.0 2 0 0 2 2 2 1 Epithelial cell adhesion molecule N-terminal domain MSV199 PF10553.9 NODE_74148_length_213_cov_0.876404_g66207_i0reverse_frame_1 - 0.043 14.1 1.3 0.046 14.0 1.3 1.1 1 0 0 1 1 1 0 MSV199 domain PilA4 PF18682.1 NODE_74147_length_213_cov_0.876404_g66206_i0forward_frame_1 - 0.16 12.3 0.0 0.2 12.0 0.0 1.1 1 0 0 1 1 1 0 Pilin A4 F-box-like PF12937.7 NODE_74145_length_213_cov_0.893258_g66204_i0reverse_frame_1 - 0.035 14.0 0.7 0.05 13.5 0.7 1.3 1 0 0 1 1 1 0 F-box-like Mito_morph_reg PF14972.6 NODE_74143_length_213_cov_0.893258_g66202_i0forward_frame_1 - 0.026 14.1 0.0 0.029 14.0 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator DUF4215 PF13948.6 NODE_74141_length_213_cov_0.898876_g66200_i0forward_frame_1 - 1.4e-10 41.4 24.6 2.9e-09 37.2 15.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4215) Bclx_interact PF08945.10 NODE_74141_length_213_cov_0.898876_g66200_i0forward_frame_1 - 0.19 11.6 0.1 0.32 10.8 0.1 1.4 1 0 0 1 1 1 0 Bcl-x interacting, BH3 domain Toxin_3 PF00537.18 NODE_74141_length_213_cov_0.898876_g66200_i0forward_frame_1 - 6.1 7.1 15.1 31 4.9 5.3 3.1 1 1 1 2 2 2 0 Scorpion toxin-like domain SPC25 PF06703.11 NODE_74131_length_213_cov_0.898876_g66190_i0reverse_frame_1 - 0.23 11.2 0.0 0.26 11.0 0.0 1.0 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Spin-Ssty PF02513.17 NODE_74129_length_213_cov_0.898876_g66188_i0forward_frame_1 - 0.05 13.3 4.1 0.072 12.8 4.1 1.2 1 0 0 1 1 1 0 Spin/Ssty Family HHH_4 PF14490.6 NODE_74126_length_213_cov_0.898876_g66185_i0forward_frame_1 - 0.19 11.7 0.0 0.24 11.4 0.0 1.1 1 0 0 1 1 1 0 Helix-hairpin-helix containing domain Paired_CXXCH_1 PF09699.10 NODE_74125_length_213_cov_0.898876_g66184_i0forward_frame_1 - 0.011 15.4 0.0 0.019 14.7 0.0 1.4 1 0 0 1 1 1 0 Doubled CXXCH motif (Paired_CXXCH_1) E3_binding PF02817.17 NODE_74121_length_213_cov_0.955056_g66180_i0reverse_frame_1 - 0.034 14.5 0.1 0.15 12.4 0.0 1.8 2 0 0 2 2 2 0 e3 binding domain DUF1366 PF07104.11 NODE_74114_length_213_cov_1.005618_g66173_i0reverse_frame_1 - 0.25 11.1 0.0 0.29 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1366) Hom_end_hint PF05203.16 NODE_74113_length_213_cov_1.022472_g66172_i0reverse_frame_1 - 0.14 12.1 0.5 0.15 12.0 0.5 1.1 1 0 0 1 1 1 0 Hom_end-associated Hint HTH_Tnp_Tc3_1 PF11427.8 NODE_74113_length_213_cov_1.022472_g66172_i0forward_frame_1 - 0.0011 18.8 0.7 0.0017 18.2 0.7 1.3 1 0 0 1 1 1 1 Tc3 transposase Pox_T4_N PF04491.12 NODE_74112_length_213_cov_1.028090_g66171_i0reverse_frame_1 - 0.039 13.8 0.5 0.06 13.2 0.5 1.3 1 0 0 1 1 1 0 Poxvirus T4 protein, N terminus ASPRs PF17641.2 NODE_74105_length_213_cov_1.112360_g66164_i0forward_frame_1 - 0.0091 16.3 0.1 0.01 16.1 0.1 1.0 1 0 0 1 1 1 1 Ancylostoma-associated secreted protein related CusF_Ec PF11604.8 NODE_74103_length_213_cov_1.112360_g66162_i0reverse_frame_1 - 0.052 13.5 0.1 0.32 11.0 0.0 2.0 2 0 0 2 2 2 0 Copper binding periplasmic protein CusF DRTGG PF07085.12 NODE_74102_length_213_cov_1.117978_g66161_i0reverse_frame_1 - 0.15 11.8 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 DRTGG domain Ank_4 PF13637.6 NODE_74102_length_213_cov_1.117978_g66161_i0forward_frame_1 - 0.044 14.4 0.2 0.062 13.9 0.2 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Chloroa_b-bind PF00504.21 NODE_74098_length_213_cov_1.123596_g66157_i0forward_frame_1 - 8.4e-09 36.2 0.0 9.6e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein ASFV_J13L PF05568.11 NODE_74096_length_213_cov_1.123596_g66155_i0forward_frame_1 - 0.19 11.5 0.2 0.17 11.6 0.2 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Sugar_tr PF00083.24 NODE_74083_length_213_cov_1.213483_g66142_i0forward_frame_1 - 3.2e-15 55.9 0.7 3.4e-15 55.9 0.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_74083_length_213_cov_1.213483_g66142_i0forward_frame_1 - 2.7e-13 49.6 0.3 2.9e-13 49.5 0.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_5 PF05631.14 NODE_74083_length_213_cov_1.213483_g66142_i0forward_frame_1 - 0.00019 20.4 0.1 0.0002 20.4 0.1 1.0 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM TRI12 PF06609.13 NODE_74083_length_213_cov_1.213483_g66142_i0forward_frame_1 - 0.0019 16.7 0.1 0.0019 16.7 0.1 1.0 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 NODE_74083_length_213_cov_1.213483_g66142_i0forward_frame_1 - 0.0045 15.6 0.3 0.0045 15.6 0.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Myosin_head PF00063.21 NODE_74082_length_213_cov_1.213483_g66141_i0reverse_frame_1 - 7.7e-12 44.2 0.0 8.5e-12 44.1 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) CHDNT PF08073.12 NODE_74081_length_213_cov_1.230337_g66140_i0reverse_frame_1 - 0.076 13.0 0.1 9.5 6.3 0.0 2.1 2 0 0 2 2 2 0 CHDNT (NUC034) domain TMEM117 PF15113.6 NODE_74070_length_213_cov_1.292135_g66129_i0reverse_frame_1 - 0.49 9.3 5.6 0.51 9.2 5.6 1.0 1 0 0 1 1 1 0 TMEM117 protein family SdpI PF13630.6 NODE_74070_length_213_cov_1.292135_g66129_i0reverse_frame_1 - 0.69 10.1 3.6 2.6 8.3 3.6 1.9 1 1 0 1 1 1 0 SdpI/YhfL protein family NUC173 PF08161.12 NODE_74068_length_213_cov_1.297753_g66127_i0forward_frame_1 - 0.081 12.6 0.4 0.067 12.8 0.4 1.1 1 0 0 1 1 1 0 NUC173 domain Ribosomal_L19 PF01245.20 NODE_74063_length_213_cov_1.337079_g66122_i0reverse_frame_1 - 0.098 12.6 0.1 0.1 12.6 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L19 DUF5408 PF17402.2 NODE_74059_length_213_cov_1.337079_g66118_i0reverse_frame_1 - 0.21 11.5 3.7 0.33 10.9 3.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5408) Ribonuc_red_sm PF00268.21 NODE_74057_length_213_cov_1.342697_g66116_i0reverse_frame_1 - 0.096 12.1 0.3 0.1 12.1 0.3 1.0 1 0 0 1 1 1 0 Ribonucleotide reductase, small chain THEG PF14912.6 NODE_74056_length_213_cov_1.342697_g66115_i0reverse_frame_1 - 0.029 14.8 1.0 0.038 14.4 1.0 1.2 1 0 0 1 1 1 0 Testicular haploid expressed repeat DEFB136 PF17333.2 NODE_74055_length_213_cov_1.342697_g66114_i0forward_frame_1 - 0.072 13.1 2.7 9.1 6.3 1.6 2.2 2 0 0 2 2 2 0 Beta defensin 136 Nefa_Nip30_N PF10187.9 NODE_74039_length_213_cov_1.348315_g66098_i0reverse_frame_1 - 0.021 15.2 0.2 0.026 14.9 0.2 1.1 1 0 0 1 1 1 0 N-terminal domain of NEFA-interacting nuclear protein NIP30 PurS PF02700.14 NODE_74032_length_213_cov_1.370787_g66091_i0reverse_frame_1 - 0.024 14.8 0.0 0.03 14.5 0.0 1.1 1 0 0 1 1 1 0 Phosphoribosylformylglycinamidine (FGAM) synthase Cyclin PF08613.11 NODE_74031_length_213_cov_1.376404_g66090_i0forward_frame_1 - 0.11 12.9 0.2 0.12 12.7 0.2 1.1 1 0 0 1 1 1 0 Cyclin Toxin_23 PF08093.11 NODE_74021_length_213_cov_1.415730_g66080_i0forward_frame_1 - 0.033 14.3 2.1 0.094 12.9 2.1 1.7 1 0 0 1 1 1 0 Magi 5 toxic peptide family RecQ5 PF06959.11 NODE_74020_length_213_cov_1.415730_g66079_i0reverse_frame_1 - 0.099 12.6 1.0 0.11 12.5 1.0 1.1 1 0 0 1 1 1 0 RecQ helicase protein-like 5 (RecQ5) BUD22 PF09073.10 NODE_74020_length_213_cov_1.415730_g66079_i0reverse_frame_1 - 1.2 8.4 6.4 1.2 8.4 6.4 1.0 1 0 0 1 1 1 0 BUD22 AAA_31 PF13614.6 NODE_74015_length_213_cov_1.443820_g66074_i0forward_frame_1 - 0.076 12.9 0.2 0.094 12.6 0.2 1.1 1 0 0 1 1 1 0 AAA domain FOXP-CC PF16159.5 NODE_74014_length_213_cov_1.449438_g66073_i0reverse_frame_1 - 0.039 14.6 1.1 0.065 13.9 1.1 1.4 1 1 0 1 1 1 0 FOXP coiled-coil domain MatE PF01554.18 NODE_74013_length_213_cov_1.460674_g66072_i0reverse_frame_1 - 1.9e-09 37.4 0.1 2.2e-09 37.2 0.1 1.0 1 0 0 1 1 1 1 MatE RAMP4 PF06624.12 NODE_74010_length_213_cov_1.483146_g66069_i0reverse_frame_1 - 0.18 11.9 0.4 0.25 11.5 0.4 1.3 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 OTU PF02338.19 NODE_74009_length_213_cov_1.488764_g66068_i0forward_frame_1 - 2.5e-06 28.0 0.0 2.9e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 OTU-like cysteine protease Tymo_45kd_70kd PF03251.13 NODE_74006_length_213_cov_1.494382_g66065_i0reverse_frame_1 - 0.021 13.8 0.0 0.025 13.6 0.0 1.0 1 0 0 1 1 1 0 Tymovirus 45/70Kd protein Chlorophyllase2 PF12740.7 NODE_74003_length_213_cov_1.511236_g66062_i0reverse_frame_1 - 0.15 11.0 0.2 0.15 10.9 0.2 1.0 1 0 0 1 1 1 0 Chlorophyllase enzyme cNMP_binding PF00027.29 NODE_74002_length_213_cov_1.516854_g66061_i0reverse_frame_1 - 6.4e-11 42.2 0.0 7e-11 42.1 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain LBP_BPI_CETP PF01273.25 NODE_74002_length_213_cov_1.516854_g66061_i0reverse_frame_1 - 0.085 12.5 0.0 0.092 12.3 0.0 1.0 1 0 0 1 1 1 0 LBP / BPI / CETP family, N-terminal domain Phage_holin_3_3 PF16083.5 NODE_74002_length_213_cov_1.516854_g66061_i0forward_frame_1 - 0.057 13.5 0.2 0.074 13.2 0.2 1.2 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III SpoU_sub_bind PF08032.12 NODE_73997_length_213_cov_1.550562_g66056_i0reverse_frame_1 - 0.004 17.4 0.0 0.0049 17.1 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding ZipA_C PF04354.13 NODE_73997_length_213_cov_1.550562_g66056_i0forward_frame_1 - 0.064 13.1 0.0 0.086 12.7 0.0 1.2 1 0 0 1 1 1 0 ZipA, C-terminal FtsZ-binding domain Ank_4 PF13637.6 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 3.8e-08 33.7 0.2 8.6e-05 23.0 0.0 1.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 1.7e-07 31.3 0.1 2.7e-07 30.7 0.1 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 4.9e-05 23.8 0.0 5.6e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 9.6e-05 22.5 0.0 0.006 17.0 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank PF00023.30 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_1 - 0.0014 19.0 0.0 0.021 15.2 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Npa1 PF11707.8 NODE_73984_length_213_cov_1.578652_g66043_i0reverse_frame_1 - 0.046 13.1 1.1 0.051 12.9 1.1 1.0 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal DOG1 PF14144.6 NODE_73984_length_213_cov_1.578652_g66043_i0reverse_frame_1 - 0.27 11.5 1.3 0.36 11.1 1.3 1.2 1 0 0 1 1 1 0 Seed dormancy control Urb2 PF10441.9 NODE_73982_length_213_cov_1.589888_g66041_i0reverse_frame_1 - 0.024 14.6 0.9 0.028 14.3 0.9 1.0 1 0 0 1 1 1 0 Urb2/Npa2 family zf-ANAPC11 PF12861.7 NODE_73980_length_213_cov_1.629213_g66039_i0reverse_frame_1 - 0.012 15.6 2.6 0.018 15.0 2.6 1.3 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Rieske PF00355.26 NODE_73979_length_213_cov_1.634831_g66038_i0reverse_frame_1 - 0.075 13.0 0.6 0.075 13.0 0.6 1.9 1 1 1 2 2 2 0 Rieske [2Fe-2S] domain PPP4R2 PF09184.11 NODE_73973_length_213_cov_1.674157_g66032_i0reverse_frame_1 - 0.0016 18.1 0.5 0.0019 17.9 0.5 1.0 1 0 0 1 1 1 1 PPP4R2 Epsilon_antitox PF08998.11 NODE_73971_length_213_cov_1.685393_g66030_i0reverse_frame_1 - 0.041 14.1 0.1 0.049 13.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial epsilon antitoxin McyA_C PF12593.8 NODE_73956_length_213_cov_1.786517_g66015_i0forward_frame_1 - 0.13 12.0 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 Microcystin synthetase C terminal FliM PF02154.15 NODE_73947_length_213_cov_1.820225_g66006_i0reverse_frame_1 - 0.13 12.2 0.1 0.13 12.1 0.1 1.0 1 0 0 1 1 1 0 Flagellar motor switch protein FliM DUF5475 PF17569.2 NODE_73947_length_213_cov_1.820225_g66006_i0forward_frame_1 - 0.013 15.8 0.4 0.015 15.6 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5475) zf-C2H2_4 PF13894.6 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.00045 20.8 0.5 0.00097 19.8 0.5 1.6 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_6 PF13912.6 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.0015 18.4 0.4 0.0022 18.0 0.4 1.2 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.0074 16.7 0.4 0.013 15.9 0.4 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.019 15.3 0.1 0.042 14.2 0.1 1.6 1 1 0 1 1 1 0 Zinc-finger double-stranded RNA-binding Anti-TRAP PF15777.5 NODE_73946_length_213_cov_1.825843_g66005_i0forward_frame_1 - 0.094 12.7 0.5 0.14 12.2 0.5 1.3 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein SPW PF03779.14 NODE_73943_length_213_cov_1.842697_g66002_i0forward_frame_1 - 0.16 11.6 1.2 0.3 10.7 1.2 1.4 1 0 0 1 1 1 0 SPW repeat NPCC PF08058.11 NODE_73942_length_213_cov_1.842697_g66001_i0reverse_frame_1 - 0.073 13.1 0.5 0.092 12.8 0.2 1.4 1 1 0 1 1 1 0 Nuclear pore complex component zf-C2H2_8 PF15909.5 NODE_73940_length_213_cov_1.882022_g65999_i0reverse_frame_1 - 0.031 14.6 0.5 0.033 14.5 0.5 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon Conotoxin PF02950.17 NODE_73938_length_213_cov_1.904494_g65997_i0forward_frame_1 - 0.2 12.7 7.1 0.28 12.2 7.1 1.2 1 0 0 1 1 1 0 Conotoxin AIG1 PF04548.16 NODE_73925_length_213_cov_2.134831_g65984_i0reverse_frame_1 - 0.00054 19.4 0.1 0.00058 19.3 0.1 1.0 1 0 0 1 1 1 1 AIG1 family Transformer PF06495.11 NODE_73921_length_213_cov_2.185393_g65980_i0reverse_frame_1 - 0.75 9.9 20.4 0.87 9.6 20.4 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein ATG2_CAD PF13329.6 NODE_73920_length_213_cov_2.185393_g65979_i0forward_frame_1 - 0.12 12.1 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Autophagy-related protein 2 CAD motif DUF2779 PF11074.8 NODE_73915_length_213_cov_2.348315_g65974_i0reverse_frame_1 - 0.016 15.7 0.0 0.016 15.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function(DUF2779) Omega-toxin PF06357.11 NODE_73910_length_213_cov_2.404494_g65969_i0reverse_frame_1 - 0.11 12.2 0.1 0.11 12.2 0.1 1.8 2 0 0 2 2 2 0 Omega-atracotoxin DUF2795 PF11387.8 NODE_73909_length_213_cov_2.415730_g65968_i0reverse_frame_1 - 0.077 13.2 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2795) UPF0565 PF10561.9 NODE_73903_length_213_cov_2.567416_g65962_i0forward_frame_1 - 0.51 9.5 2.2 0.5 9.5 2.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Cation_ATPase_C PF00689.21 NODE_73898_length_213_cov_2.674157_g65957_i0forward_frame_1 - 0.012 15.4 0.1 0.012 15.3 0.1 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus 3-alpha PF03475.14 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_1 - 0.059 13.2 0.1 0.1 12.5 0.1 1.4 1 0 0 1 1 1 0 3-alpha domain Herpes_U59 PF04529.12 NODE_73889_length_213_cov_2.893258_g65948_i0reverse_frame_1 - 0.13 11.3 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus U59 protein ADH_N PF08240.12 NODE_73888_length_213_cov_2.938202_g65947_i0reverse_frame_1 - 1.3 9.0 5.8 13 5.7 0.5 2.7 1 1 2 3 3 3 0 Alcohol dehydrogenase GroES-like domain DNA_methylase PF00145.17 NODE_73882_length_213_cov_3.146067_g65941_i0reverse_frame_1 - 7.6e-07 28.8 0.0 8.1e-07 28.7 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks379.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks379.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks379.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks379.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SSP160 PF06933.11 ORF28293 - 3 5.9 16.8 4.5 5.4 16.8 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Glycos_transf_3 PF00591.21 ORF26032 - 2.6e-53 181.2 1.1 4.1e-53 180.6 1.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain PYNP_C PF07831.13 ORF26032 - 3.5e-26 90.7 0.3 6.8e-26 89.7 0.3 1.5 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain Tetraspanin PF00335.20 ORF23422 - 7.9e-12 45.4 6.7 6.1e-10 39.2 5.3 2.6 2 1 0 2 2 2 2 Tetraspanin family SpoIIIAH PF12685.7 ORF23422 - 0.0026 17.6 2.7 0.0047 16.8 2.7 1.3 1 0 0 1 1 1 1 SpoIIIAH-like protein FAM176 PF14851.6 ORF23422 - 0.019 14.6 0.4 0.019 14.6 0.4 2.0 2 0 0 2 2 2 0 FAM176 family SARAF PF06682.12 ORF23422 - 0.069 12.8 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Pkinase PF00069.25 ORF21962 - 4.3e-63 213.2 0.0 7.6e-63 212.3 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF21962 - 3.7e-29 101.8 0.1 7.5e-29 100.8 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF21962 - 7.8e-29 99.9 3.4 5.6e-14 52.3 0.8 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF21962 - 8.6e-29 96.9 7.3 4.4e-07 29.0 0.2 4.9 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF21962 - 2.1e-23 80.2 6.0 2.8e-07 29.9 0.3 4.8 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF21962 - 7.1e-21 72.7 8.6 1.1e-05 24.7 0.1 4.7 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF21962 - 3e-15 55.8 10.8 2.3e-06 27.4 0.6 4.6 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF21962 - 5.7e-08 33.1 0.9 0.002 18.4 0.2 2.5 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kinase-like PF14531.6 ORF21962 - 3.7e-07 29.8 0.0 9.8e-07 28.4 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF21962 - 2.6e-06 27.0 0.2 7.2e-06 25.5 0.0 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF21962 - 5.1e-06 26.4 3.3 0.066 13.2 0.1 2.7 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand APH PF01636.23 ORF21962 - 3.8e-05 23.7 0.0 8e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_9 PF14658.6 ORF21962 - 0.0015 18.8 0.0 0.022 15.1 0.0 2.8 2 0 0 2 2 2 1 EF-hand domain DUF5580 PF17743.1 ORF21962 - 0.0016 17.1 0.4 0.0098 14.5 0.0 1.9 1 1 1 2 2 2 1 Family of unknown function (DUF5580) YrbL-PhoP_reg PF10707.9 ORF21962 - 0.014 14.9 0.0 0.35 10.3 0.0 2.3 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF21962 - 0.026 13.3 0.0 0.044 12.6 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase DUF4032 PF13224.6 ORF21962 - 0.091 12.6 0.2 0.28 11.1 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4032) Dockerin_1 PF00404.18 ORF21962 - 0.53 10.5 2.9 3.5 7.9 0.3 3.6 4 1 0 4 4 4 0 Dockerin type I domain DTC PF18102.1 ORF20562 - 1e-44 151.9 0.1 2.4e-44 150.7 0.1 1.7 2 0 0 2 2 2 1 Deltex C-terminal domain zf-Di19 PF05605.12 ORF20562 - 0.0083 16.4 0.9 1.4 9.3 0.3 2.5 2 0 0 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding Dickkopf_N PF04706.12 ORF15701 - 8.2e-06 26.2 9.6 8.2e-06 26.2 9.6 3.8 3 2 1 4 4 4 2 Dickkopf N-terminal cysteine-rich region Pkinase PF00069.25 ORF147788 - 1.2e-68 231.3 0.1 1.2e-68 231.3 0.1 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF147788 - 3e-38 131.6 0.0 4.4e-38 131.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF147788 - 0.00013 20.9 0.0 0.00028 19.8 0.0 1.5 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF147788 - 0.0028 17.0 0.0 0.0063 15.9 0.0 1.6 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF147788 - 0.12 11.7 2.0 0.26 10.6 0.2 2.1 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family CAP PF00188.26 ORF14194 - 0.012 16.4 0.0 0.14 13.0 0.0 2.4 1 1 0 1 1 1 0 Cysteine-rich secretory protein family Use1 PF09753.9 ORF14194 - 1.7 8.3 7.8 0.89 9.2 2.1 2.1 2 0 0 2 2 2 0 Membrane fusion protein Use1 Ino80_Iec3 PF14612.6 ORF14194 - 2.1 8.9 8.7 0.21 12.2 0.3 2.3 2 1 1 3 3 3 0 IEC3 subunit of the Ino80 complex, chromatin re-modelling Pkinase PF00069.25 ORF135747 - 4.3e-63 213.2 0.0 7.6e-63 212.3 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF135747 - 3.7e-29 101.8 0.1 7.5e-29 100.8 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF135747 - 7.8e-29 99.9 3.4 5.6e-14 52.3 0.8 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF135747 - 8.6e-29 96.9 7.3 4.4e-07 29.0 0.2 4.9 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF135747 - 2.1e-23 80.2 6.0 2.8e-07 29.9 0.3 4.8 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF135747 - 7.1e-21 72.7 8.6 1.1e-05 24.7 0.1 4.7 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF135747 - 3e-15 55.8 10.8 2.3e-06 27.4 0.6 4.6 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF135747 - 5.7e-08 33.1 0.9 0.002 18.4 0.2 2.5 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kinase-like PF14531.6 ORF135747 - 3.7e-07 29.8 0.0 9.8e-07 28.4 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF135747 - 2.6e-06 27.0 0.2 7.2e-06 25.5 0.0 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF135747 - 5.1e-06 26.4 3.3 0.066 13.2 0.1 2.7 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand APH PF01636.23 ORF135747 - 3.8e-05 23.7 0.0 8e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_9 PF14658.6 ORF135747 - 0.0015 18.8 0.0 0.022 15.1 0.0 2.8 2 0 0 2 2 2 1 EF-hand domain DUF5580 PF17743.1 ORF135747 - 0.0016 17.1 0.4 0.0098 14.5 0.0 1.9 1 1 1 2 2 2 1 Family of unknown function (DUF5580) YrbL-PhoP_reg PF10707.9 ORF135747 - 0.014 14.9 0.0 0.35 10.3 0.0 2.3 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF135747 - 0.026 13.3 0.0 0.044 12.6 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase DUF4032 PF13224.6 ORF135747 - 0.091 12.6 0.2 0.28 11.1 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4032) Dockerin_1 PF00404.18 ORF135747 - 0.53 10.5 2.9 3.5 7.9 0.3 3.6 4 1 0 4 4 4 0 Dockerin type I domain Ribosomal_L27A PF00828.19 ORF123286 - 2.2e-10 41.3 0.0 3.9e-10 40.5 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF123286 - 0.14 11.5 0.0 0.26 10.7 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e DTC PF18102.1 ORF122925 - 1e-44 151.9 0.1 2.4e-44 150.7 0.1 1.7 2 0 0 2 2 2 1 Deltex C-terminal domain zf-Di19 PF05605.12 ORF122925 - 0.0083 16.4 0.9 1.4 9.3 0.3 2.5 2 0 0 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding RCC1_2 PF13540.6 ORF120074 - 6.7e-35 118.2 26.6 2.6e-06 27.1 0.1 7.4 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF120074 - 4.1e-12 46.5 17.7 1.6 9.4 0.1 10.1 7 4 1 8 8 8 6 Regulator of chromosome condensation (RCC1) repeat Methyltranf_PUA PF13636.6 ORF120074 - 0.0036 17.3 0.0 1.3 9.1 0.0 3.6 4 0 0 4 4 4 1 RNA-binding PUA-like domain of methyltransferase RsmF FAM35_C PF15793.5 ORF120074 - 0.16 11.3 0.0 20 4.5 0.0 3.0 3 0 0 3 3 3 0 Protein family FAM35, C-terminal Pkinase PF00069.25 ORF113404 - 4.3e-63 213.2 0.0 7.6e-63 212.3 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF113404 - 3.7e-29 101.8 0.1 7.5e-29 100.8 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF113404 - 7.8e-29 99.9 3.4 5.6e-14 52.3 0.8 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF113404 - 8.6e-29 96.9 7.3 4.4e-07 29.0 0.2 4.9 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF113404 - 2.1e-23 80.2 6.0 2.8e-07 29.9 0.3 4.8 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF113404 - 7.1e-21 72.7 8.6 1.1e-05 24.7 0.1 4.7 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF113404 - 3e-15 55.8 10.8 2.3e-06 27.4 0.6 4.6 1 1 3 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF113404 - 5.7e-08 33.1 0.9 0.002 18.4 0.2 2.5 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kinase-like PF14531.6 ORF113404 - 3.7e-07 29.8 0.0 9.8e-07 28.4 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF113404 - 2.6e-06 27.0 0.2 7.2e-06 25.5 0.0 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 ORF113404 - 5.1e-06 26.4 3.3 0.066 13.2 0.1 2.7 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand APH PF01636.23 ORF113404 - 3.8e-05 23.7 0.0 8e-05 22.7 0.0 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family EF-hand_9 PF14658.6 ORF113404 - 0.0015 18.8 0.0 0.022 15.1 0.0 2.8 2 0 0 2 2 2 1 EF-hand domain DUF5580 PF17743.1 ORF113404 - 0.0016 17.1 0.4 0.0098 14.5 0.0 1.9 1 1 1 2 2 2 1 Family of unknown function (DUF5580) YrbL-PhoP_reg PF10707.9 ORF113404 - 0.014 14.9 0.0 0.35 10.3 0.0 2.3 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF113404 - 0.026 13.3 0.0 0.044 12.6 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase DUF4032 PF13224.6 ORF113404 - 0.091 12.6 0.2 0.28 11.1 0.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4032) Dockerin_1 PF00404.18 ORF113404 - 0.53 10.5 2.9 3.5 7.9 0.3 3.6 4 1 0 4 4 4 0 Dockerin type I domain RibD_C PF01872.17 ORF112536 - 4.3e-64 216.0 0.0 5.9e-64 215.6 0.0 1.2 1 0 0 1 1 1 1 RibD C-terminal domain dCMP_cyt_deam_1 PF00383.23 ORF112536 - 8.9e-22 76.9 0.4 1.3e-21 76.3 0.4 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 ORF112536 - 1.2e-12 47.7 0.0 2e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 MafB19-like deaminase Inv-AAD PF18785.1 ORF112536 - 0.0032 17.3 0.1 0.023 14.6 0.1 2.1 1 1 0 1 1 1 1 Invertebrate-AID/APOBEC-deaminase APOBEC_N PF08210.11 ORF112536 - 0.12 12.3 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 APOBEC-like N-terminal domain FGGY_N PF00370.21 ORF107726 - 3.3e-10 40.0 0.0 1.1e-05 25.1 0.0 2.4 2 1 0 2 2 2 2 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 ORF107726 - 0.00056 19.7 0.0 0.00094 18.9 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain Exo_endo_phos PF03372.23 ORF103006 - 0.0043 16.6 0.0 0.0067 16.0 0.0 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family EF1G PF00647.19 ORF101879 - 2.3e-29 101.6 0.1 4.8e-29 100.5 0.1 1.6 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_N PF02798.20 ORF101879 - 1.5e-09 38.0 0.0 3.7e-09 36.8 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF101879 - 1.1e-06 28.7 1.4 2.9e-06 27.4 0.1 2.2 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF101879 - 1.3e-06 28.7 0.0 3e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF101879 - 0.00015 21.7 0.0 0.0003 20.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF101879 - 0.00018 21.6 1.5 0.0003 20.9 0.0 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 ORF101879 - 0.0029 17.4 0.0 0.0054 16.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF101879 - 0.0083 16.4 0.0 0.019 15.2 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF101879 - 0.079 13.7 0.0 0.2 12.4 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain GluRS_N PF18466.1 ORF101879 - 0.14 12.6 0.3 2.5 8.6 0.0 2.9 3 0 0 3 3 3 0 Glutamate--tRNA ligase N-terminal domain Transket_pyr PF02779.24 ORF99995 - 2.5e-31 108.7 0.4 4.6e-31 107.9 0.4 1.5 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF99995 - 5.7e-21 74.7 0.0 9.8e-21 73.9 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain Ras PF00071.22 ORF98561 - 6.4e-42 142.9 0.2 1e-41 142.3 0.2 1.3 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF98561 - 5.7e-21 75.0 0.0 1e-20 74.1 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase DnaJ PF00226.31 ORF98561 - 8.2e-20 70.7 0.6 3e-19 68.9 0.7 2.0 2 0 0 2 2 2 1 DnaJ domain Arf PF00025.21 ORF98561 - 7.5e-10 38.5 0.0 1.3e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family Armet PF10208.9 ORF98561 - 2.5e-05 24.3 0.3 6.6e-05 22.9 0.3 1.6 1 0 0 1 1 1 1 Degradation arginine-rich protein for mis-folding MMR_HSR1 PF01926.23 ORF98561 - 0.0062 16.6 0.0 0.012 15.7 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase SAP PF02037.27 ORF98561 - 0.0099 15.6 1.4 2.5 8.0 0.9 3.5 3 0 0 3 3 3 1 SAP domain GTP_EFTU PF00009.27 ORF98561 - 0.011 15.3 0.0 0.032 13.8 0.0 1.8 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain DUF1192 PF06698.11 ORF98561 - 0.043 13.9 0.0 0.14 12.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) EF-hand_14 PF17959.1 ORF98561 - 0.099 13.0 0.0 2.7 8.4 0.0 2.5 2 0 0 2 2 2 0 EF-hand domain SRR PF07709.11 ORF98561 - 0.23 12.0 1.0 10 7.0 0.0 3.5 3 0 0 3 3 3 0 Seven Residue Repeat DUF2968 PF11180.8 ORF945 - 0.002 17.8 0.5 0.002 17.8 0.5 5.5 2 2 4 6 6 6 1 Protein of unknown function (DUF2968) ATG16 PF08614.11 ORF945 - 0.015 15.6 81.8 0.051 13.8 6.0 5.1 1 1 4 5 5 5 0 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 ORF945 - 0.023 14.7 3.5 0.023 14.7 3.5 8.3 2 2 6 8 8 8 0 TATA element modulatory factor 1 DNA binding APG6_N PF17675.1 ORF945 - 0.026 15.0 100.2 0.062 13.8 13.9 5.6 1 1 4 5 5 5 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF945 - 0.25 10.2 93.9 0.12 11.2 24.4 3.6 1 1 3 4 4 4 0 Spc7 kinetochore protein TolA_bind_tri PF16331.5 ORF945 - 0.39 10.8 47.0 0.07 13.2 3.0 6.1 3 3 2 5 5 5 0 TolA binding protein trimerisation Fe-S_assembly PF04384.13 ORF945 - 1.7 9.3 10.3 7.1 7.3 0.8 3.7 3 1 0 3 3 3 0 Iron-sulphur cluster assembly TPR_MLP1_2 PF07926.12 ORF945 - 1.9 8.6 88.1 0.03 14.4 11.5 5.4 2 2 2 4 4 4 0 TPR/MLP1/MLP2-like protein Abhydro_lipase PF04083.16 ORF94441 - 2.2e-20 72.0 0.0 4.2e-20 71.1 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF94441 - 2.2e-14 53.8 0.6 7.9e-14 51.9 0.6 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF94441 - 2.4e-06 27.0 0.0 1.8e-05 24.2 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ribosomal_S24e PF01282.19 ORF82214 - 0.093 12.7 0.1 0.25 11.3 0.1 1.7 1 0 0 1 1 1 0 Ribosomal protein S24e Dickkopf_N PF04706.12 ORF79092 - 4.1e-06 27.2 13.3 4.1e-06 27.2 13.3 4.4 4 1 0 4 4 4 1 Dickkopf N-terminal cysteine-rich region Pkinase PF00069.25 ORF73272 - 2.8e-71 240.0 0.0 3.4e-71 239.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF73272 - 3e-33 115.2 0.0 3.7e-33 114.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF73272 - 0.0041 16.5 0.1 0.018 14.3 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF73272 - 0.01 14.6 0.0 0.019 13.7 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF73272 - 0.029 13.4 0.0 0.048 12.7 0.0 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 FTA2 PF13095.6 ORF73272 - 0.03 14.0 4.6 0.29 10.7 0.3 2.9 3 0 0 3 3 3 0 Kinetochore Sim4 complex subunit FTA2 Sun2_CC2 PF18580.1 ORF73272 - 0.19 11.9 0.3 0.43 10.8 0.1 1.6 2 0 0 2 2 2 0 SUN2 coiled coil domain 2 DUF2968 PF11180.8 ORF72332 - 0.002 17.8 0.5 0.002 17.8 0.5 5.5 2 2 4 6 6 6 1 Protein of unknown function (DUF2968) ATG16 PF08614.11 ORF72332 - 0.015 15.6 81.8 0.051 13.8 6.0 5.1 1 1 4 5 5 5 0 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 ORF72332 - 0.023 14.7 3.5 0.023 14.7 3.5 8.3 2 2 6 8 8 8 0 TATA element modulatory factor 1 DNA binding APG6_N PF17675.1 ORF72332 - 0.026 15.0 100.2 0.062 13.8 13.9 5.6 1 1 4 5 5 5 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF72332 - 0.25 10.2 93.9 0.12 11.2 24.4 3.6 1 1 3 4 4 4 0 Spc7 kinetochore protein TolA_bind_tri PF16331.5 ORF72332 - 0.39 10.8 47.0 0.07 13.2 3.0 6.1 3 3 2 5 5 5 0 TolA binding protein trimerisation Fe-S_assembly PF04384.13 ORF72332 - 1.7 9.3 10.3 7.1 7.3 0.8 3.7 3 1 0 3 3 3 0 Iron-sulphur cluster assembly TPR_MLP1_2 PF07926.12 ORF72332 - 1.9 8.6 88.1 0.03 14.4 11.5 5.4 2 2 2 4 4 4 0 TPR/MLP1/MLP2-like protein OTCace PF00185.24 ORF66151 - 4.2e-41 140.6 0.0 6.9e-41 139.9 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 ORF66151 - 2.6e-25 89.2 0.0 6.6e-25 87.9 0.0 1.7 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FMN_dh PF01070.18 ORF63714 - 2.4e-125 418.2 0.0 2.9e-125 417.9 0.0 1.1 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 ORF63714 - 3.1e-06 26.4 3.7 2e-05 23.8 1.2 2.3 1 1 1 2 2 2 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 ORF63714 - 3.1e-05 23.5 3.4 4.7e-05 22.9 3.4 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase Glu_synthase PF01645.17 ORF63714 - 0.00086 18.5 0.7 0.0014 17.9 0.7 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase IGPS PF00218.21 ORF63714 - 0.0031 16.7 0.0 0.011 15.0 0.0 1.9 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase ThiG PF05690.14 ORF63714 - 0.0055 16.0 0.8 0.58 9.4 0.7 2.2 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 ORF63714 - 0.088 12.3 0.2 0.62 9.5 0.1 2.0 1 1 1 2 2 2 0 Histidine biosynthesis protein DHO_dh PF01180.21 ORF63714 - 0.13 11.4 0.2 0.21 10.8 0.2 1.3 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase PSS PF03034.15 ORF61399 - 9.6e-58 196.1 12.0 5e-56 190.5 12.0 2.2 1 1 0 1 1 1 1 Phosphatidyl serine synthase DUF1712 PF08217.11 ORF60824 - 2.5e-12 46.1 0.1 1.6e-10 40.1 0.2 2.9 2 1 0 2 2 2 2 Fungal domain of unknown function (DUF1712) Abhydro_lipase PF04083.16 ORF60015 - 2.2e-20 72.0 0.0 4.2e-20 71.1 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF60015 - 2.2e-14 53.8 0.6 7.9e-14 51.9 0.6 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF60015 - 2.4e-06 27.0 0.0 1.8e-05 24.2 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 EF-hand_6 PF13405.6 ORF53617 - 2.6e-15 55.0 3.8 0.00015 21.4 0.5 5.0 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF53617 - 5.8e-14 50.5 3.6 8.6e-05 21.8 0.3 5.1 5 0 0 5 5 5 2 EF hand EF-hand_7 PF13499.6 ORF53617 - 7.4e-14 52.0 8.7 5.2e-09 36.4 0.2 4.6 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF53617 - 2.9e-10 39.8 4.0 6.1e-06 26.0 0.1 4.6 4 1 0 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF53617 - 6.3e-09 34.9 1.7 4.6e-05 22.7 0.3 3.8 3 0 0 3 3 3 2 EF hand EF-hand_11 PF08976.11 ORF53617 - 7.7e-05 23.5 0.5 0.0011 19.8 0.0 2.8 3 0 0 3 3 3 1 EF-hand domain EF-hand_4 PF12763.7 ORF53617 - 0.73 9.8 3.9 2.2 8.3 0.2 3.1 3 1 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand EF-hand_6 PF13405.6 ORF52900 - 2.6e-15 55.0 3.8 0.00015 21.4 0.5 5.0 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF52900 - 5.8e-14 50.5 3.6 8.6e-05 21.8 0.3 5.1 5 0 0 5 5 5 2 EF hand EF-hand_7 PF13499.6 ORF52900 - 7.4e-14 52.0 8.7 5.2e-09 36.4 0.2 4.6 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF52900 - 2.9e-10 39.8 4.0 6.1e-06 26.0 0.1 4.6 4 1 0 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF52900 - 6.3e-09 34.9 1.7 4.6e-05 22.7 0.3 3.8 3 0 0 3 3 3 2 EF hand EF-hand_11 PF08976.11 ORF52900 - 7.7e-05 23.5 0.5 0.0011 19.8 0.0 2.8 3 0 0 3 3 3 1 EF-hand domain EF-hand_4 PF12763.7 ORF52900 - 0.73 9.8 3.9 2.2 8.3 0.2 3.1 3 1 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand EamA PF00892.20 ORF52805 - 3.4e-06 27.3 41.1 9.3e-06 25.9 10.9 2.7 3 0 0 3 3 3 2 EamA-like transporter family Ribosomal_S15 PF00312.22 ORF42613 - 1.9e-16 60.0 0.2 1.9e-16 60.0 0.2 1.8 2 0 0 2 2 2 1 Ribosomal protein S15 Tom37 PF10568.9 ORF42613 - 0.037 14.4 0.0 0.073 13.4 0.0 1.5 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein HP0268 PF18618.1 ORF42613 - 0.049 14.0 2.0 0.3 11.5 1.7 2.4 1 1 1 2 2 2 0 HP0268 LPG_synthase_TM PF03706.13 ORF42613 - 0.076 12.5 1.8 0.12 11.9 1.8 1.3 1 0 0 1 1 1 0 Lysylphosphatidylglycerol synthase TM region LOH1CR12 PF10158.9 ORF41665 - 0.078 13.0 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Tumour suppressor protein FAIM1 PF06905.13 ORF40803 - 0.024 14.4 0.1 0.039 13.6 0.1 1.3 1 0 0 1 1 1 0 Fas apoptotic inhibitory molecule (FAIM1) HA2 PF04408.23 ORF3831 - 5.7e-24 84.5 0.0 1.7e-23 83.0 0.0 1.8 2 0 0 2 2 2 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 ORF3831 - 2.9e-05 24.4 0.0 5.3e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold NFACT-C PF11923.8 ORF30939 - 7e-19 67.7 0.1 7e-19 67.7 0.1 3.2 3 2 0 3 3 3 1 NFACT protein C-terminal domain Ribosomal_L34e PF01199.18 ORF30939 - 0.093 13.0 0.7 0.093 13.0 0.7 2.6 3 1 1 4 4 4 0 Ribosomal protein L34e SWIB PF02201.18 ORF30918 - 5.4e-14 51.8 0.5 5.4e-14 51.8 0.5 2.4 2 0 0 2 2 2 1 SWIB/MDM2 domain FHA PF00498.26 ORF24415 - 2.4e-11 43.8 0.4 8.5e-11 42.0 0.0 2.2 2 0 0 2 2 2 1 FHA domain RINGv PF12906.7 ORF24415 - 4.9e-11 42.6 8.9 4.9e-11 42.6 8.9 2.0 2 0 0 2 2 2 1 RING-variant domain Yop-YscD_cpl PF16697.5 ORF24415 - 1.4e-06 28.5 0.0 7.1e-05 23.1 0.0 2.4 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain zf-RING_2 PF13639.6 ORF24415 - 0.4 11.0 9.2 0.94 9.9 8.0 2.3 1 1 1 2 2 2 0 Ring finger domain MFS_1 PF07690.16 ORF22232 - 2.1e-15 56.5 0.0 2.7e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF22232 - 9.7e-14 51.1 0.0 1.2e-13 50.8 0.0 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_4 PF06779.14 ORF22232 - 1.8e-05 24.2 0.0 2.5e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB DUF5373 PF17343.2 ORF22232 - 0.68 9.8 6.0 1.3 8.8 5.7 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5373) EF-hand_6 PF13405.6 ORF20773 - 2.6e-15 55.0 3.8 0.00015 21.4 0.5 5.0 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF20773 - 5.8e-14 50.5 3.6 8.6e-05 21.8 0.3 5.1 5 0 0 5 5 5 2 EF hand EF-hand_7 PF13499.6 ORF20773 - 7.4e-14 52.0 8.7 5.2e-09 36.4 0.2 4.6 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF20773 - 2.9e-10 39.8 4.0 6.1e-06 26.0 0.1 4.6 4 1 0 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF20773 - 6.3e-09 34.9 1.7 4.6e-05 22.7 0.3 3.8 3 0 0 3 3 3 2 EF hand EF-hand_11 PF08976.11 ORF20773 - 7.7e-05 23.5 0.5 0.0011 19.8 0.0 2.8 3 0 0 3 3 3 1 EF-hand domain EF-hand_4 PF12763.7 ORF20773 - 0.73 9.8 3.9 2.2 8.3 0.2 3.1 3 1 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand DUF4186 PF13811.6 ORF1935 - 0.026 14.6 0.5 0.026 14.6 0.5 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4186) Pox_L5 PF04872.13 ORF152578 - 0.042 13.7 0.3 1.1 9.2 0.0 2.8 2 0 0 2 2 2 0 Poxvirus L5 protein family PAN_4 PF14295.6 ORF152281 - 2.4e-06 27.4 10.9 0.001 18.9 1.1 3.2 3 0 0 3 3 3 2 PAN domain PAN_1 PF00024.26 ORF152281 - 0.00012 22.0 5.1 0.00066 19.6 0.5 2.6 2 0 0 2 2 2 1 PAN domain PAN_2 PF08276.11 ORF152281 - 0.095 12.8 5.9 0.26 11.4 0.3 2.8 2 0 0 2 2 2 0 PAN-like domain MANEC PF07502.14 ORF152281 - 0.17 12.1 10.1 1.3 9.4 1.4 2.8 3 0 0 3 3 3 0 MANEC domain PAN_3 PF08277.12 ORF152281 - 1.8 8.4 10.2 0.12 12.2 1.8 3.0 3 1 0 3 3 3 0 PAN-like domain TPR_12 PF13424.6 ORF145878 - 0.0022 18.2 9.4 0.006 16.8 1.8 4.3 5 1 1 6 6 6 2 Tetratricopeptide repeat HGD-D PF06050.13 ORF145878 - 0.033 13.9 0.5 0.089 12.5 0.3 1.5 1 1 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component TPR_1 PF00515.28 ORF145878 - 0.1 12.5 1.0 1.6 8.7 0.9 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF145878 - 0.17 12.1 8.1 1.3 9.5 1.4 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF145878 - 0.24 11.5 1.9 2.4 8.4 0.8 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat PEP-utilisers_N PF05524.13 ORF145878 - 3.4 7.9 8.1 0.47 10.6 1.1 2.8 2 1 0 2 2 2 0 PEP-utilising enzyme, N-terminal TPR_2 PF07719.17 ORF145878 - 5.8 7.3 15.3 0.52 10.6 3.0 4.9 6 0 0 6 6 6 0 Tetratricopeptide repeat BPD_transp_2 PF02653.16 ORF144387 - 1.2e-49 168.9 41.5 1.2e-49 168.9 41.5 2.0 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component LOH1CR12 PF10158.9 ORF141268 - 0.078 13.0 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Tumour suppressor protein Gln-synt_C PF00120.24 ORF140219 - 1.3e-20 73.7 0.0 5.4e-17 61.8 0.0 2.1 2 0 0 2 2 2 2 Glutamine synthetase, catalytic domain DUF4462 PF14692.6 ORF140219 - 0.095 12.2 0.1 0.095 12.2 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4462) Abhydrolase_1 PF00561.20 ORF130885 - 5.8e-19 68.7 0.0 3.9e-18 66.0 0.0 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF130885 - 2.3e-18 65.5 0.0 5e-18 64.4 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF130885 - 7.5e-08 31.9 0.0 0.00011 21.6 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 EF-hand_6 PF13405.6 ORF128034 - 2.6e-15 55.0 3.8 0.00015 21.4 0.5 5.0 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF128034 - 5.8e-14 50.5 3.6 8.6e-05 21.8 0.3 5.1 5 0 0 5 5 5 2 EF hand EF-hand_7 PF13499.6 ORF128034 - 7.4e-14 52.0 8.7 5.2e-09 36.4 0.2 4.6 4 1 1 5 5 5 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF128034 - 2.9e-10 39.8 4.0 6.1e-06 26.0 0.1 4.6 4 1 0 4 4 4 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF128034 - 6.3e-09 34.9 1.7 4.6e-05 22.7 0.3 3.8 3 0 0 3 3 3 2 EF hand EF-hand_11 PF08976.11 ORF128034 - 7.7e-05 23.5 0.5 0.0011 19.8 0.0 2.8 3 0 0 3 3 3 1 EF-hand domain EF-hand_4 PF12763.7 ORF128034 - 0.73 9.8 3.9 2.2 8.3 0.2 3.1 3 1 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand Pkinase PF00069.25 ORF123080 - 1e-67 228.3 0.0 1.9e-67 227.4 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF123080 - 8.8e-35 120.2 0.0 1.8e-34 119.2 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF123080 - 6.6e-05 22.4 0.0 0.00092 18.6 0.0 2.3 2 0 0 2 2 2 1 Kinase-like Seadorna_VP7 PF07387.11 ORF123080 - 0.0016 17.6 0.0 0.0028 16.8 0.0 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 YukC PF10140.9 ORF123080 - 0.0022 16.9 0.2 0.0058 15.5 0.0 1.7 2 0 0 2 2 2 1 WXG100 protein secretion system (Wss), protein YukC Pkinase_fungal PF17667.1 ORF123080 - 0.016 14.0 0.0 0.049 12.4 0.0 1.7 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF123080 - 0.096 12.6 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family FAD_binding_3 PF01494.19 ORF121229 - 1.4e-14 54.1 0.1 1.9e-14 53.7 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF121229 - 0.0056 15.8 0.0 0.025 13.6 0.0 1.9 2 0 0 2 2 2 1 Squalene epoxidase Pescadillo_N PF06732.11 ORF118449 - 3.4e-10 39.9 0.0 3.4e-10 39.9 0.0 1.8 2 0 0 2 2 2 1 Pescadillo N-terminus BRCT_2 PF16589.5 ORF118449 - 0.00021 21.6 0.0 0.00062 20.1 0.0 1.8 2 0 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain GAS2 PF02187.17 ORF111959 - 2.6e-07 30.6 0.2 7.3e-07 29.2 0.2 1.8 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain GAS PF13851.6 ORF111959 - 0.00079 18.8 16.0 0.00079 18.8 16.0 2.3 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding DUF3916 PF13079.6 ORF111959 - 0.0023 17.8 0.1 0.0069 16.3 0.1 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF3916) Seryl_tRNA_N PF02403.22 ORF111959 - 0.0043 17.3 4.8 0.0043 17.3 4.8 3.1 1 1 2 3 3 3 1 Seryl-tRNA synthetase N-terminal domain Mod_r PF07200.13 ORF111959 - 0.0047 17.0 3.3 0.0047 17.0 3.3 3.4 1 1 2 3 3 3 1 Modifier of rudimentary (Mod(r)) protein Laminin_II PF06009.12 ORF111959 - 0.013 15.5 7.4 0.024 14.7 2.5 2.8 2 1 0 2 2 2 0 Laminin Domain II Lysine_decarbox PF03641.14 ORF111959 - 0.024 14.7 1.3 1.9 8.6 0.1 2.5 2 0 0 2 2 2 0 Possible lysine decarboxylase XhlA PF10779.9 ORF111959 - 0.03 14.5 1.0 0.03 14.5 1.0 4.1 5 0 0 5 5 4 0 Haemolysin XhlA Gon7 PF08738.10 ORF111959 - 0.06 13.4 1.4 0.11 12.6 0.1 2.1 2 0 0 2 2 2 0 Gon7 family Med30 PF11315.8 ORF111959 - 0.087 13.0 8.9 0.037 14.2 3.9 2.9 1 1 0 2 2 2 0 Mediator complex subunit 30 DegS PF05384.11 ORF111959 - 0.1 12.1 15.6 0.05 13.1 8.0 3.0 1 1 2 3 3 3 0 Sensor protein DegS TfoX_N PF04993.13 ORF111959 - 0.12 12.7 0.3 0.28 11.4 0.3 1.7 1 0 0 1 1 1 0 TfoX N-terminal domain DUF5344 PF17279.2 ORF111959 - 0.25 12.0 8.8 1.7 9.3 0.2 3.7 2 1 0 3 3 3 0 Family of unknown function (DUF5344) DUF948 PF06103.11 ORF111959 - 0.25 11.6 4.1 2.3 8.6 1.0 3.3 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) COG2 PF06148.11 ORF111959 - 0.31 11.1 10.0 1.6 8.8 0.9 2.6 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 CorA PF01544.18 ORF111959 - 0.34 10.2 8.5 0.19 11.0 6.2 1.7 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein Sec34 PF04136.15 ORF111959 - 0.71 9.7 10.6 0.88 9.4 1.7 3.2 1 1 1 3 3 3 0 Sec34-like family V_ATPase_I PF01496.19 ORF111959 - 1 7.2 10.5 0.74 7.7 9.0 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Baculo_PEP_C PF04513.12 ORF111959 - 1.2 9.1 6.2 2.3 8.2 0.3 2.8 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus PCRF PF03462.18 ORF111959 - 2.6 7.9 19.1 0.71 9.7 4.7 3.3 1 1 2 3 3 3 0 PCRF domain FliT PF05400.13 ORF111959 - 2.6 8.9 18.3 1 10.2 4.4 3.5 2 1 1 3 3 3 0 Flagellar protein FliT DASH_Dam1 PF08653.10 ORF111959 - 2.8 7.8 4.0 26 4.7 0.1 3.2 3 0 0 3 3 3 0 DASH complex subunit Dam1 YabA PF06156.13 ORF111959 - 3.7 8.2 19.5 0.25 12.0 3.3 3.7 2 1 2 4 4 3 0 Initiation control protein YabA DUF1664 PF07889.12 ORF111959 - 4.2 7.4 9.4 0.79 9.8 1.2 2.8 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) GrpE PF01025.19 ORF111959 - 6.4 6.4 22.7 3.5 7.3 11.9 3.0 2 1 1 3 3 3 0 GrpE DUF4404 PF14357.6 ORF111959 - 9.1 7.0 16.4 0.25 12.0 1.0 3.6 3 1 1 4 4 3 0 Domain of unknown function (DUF4404) TPR_12 PF13424.6 ORF110670 - 0.0022 18.2 9.4 0.006 16.8 1.8 4.3 5 1 1 6 6 6 2 Tetratricopeptide repeat HGD-D PF06050.13 ORF110670 - 0.033 13.9 0.5 0.089 12.5 0.3 1.5 1 1 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component TPR_1 PF00515.28 ORF110670 - 0.1 12.5 1.0 1.6 8.7 0.9 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF110670 - 0.17 12.1 8.1 1.3 9.5 1.4 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF110670 - 0.24 11.5 1.9 2.4 8.4 0.8 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat PEP-utilisers_N PF05524.13 ORF110670 - 3.4 7.9 8.1 0.47 10.6 1.1 2.8 2 1 0 2 2 2 0 PEP-utilising enzyme, N-terminal TPR_2 PF07719.17 ORF110670 - 5.8 7.3 15.3 0.52 10.6 3.0 4.9 6 0 0 6 6 6 0 Tetratricopeptide repeat VWA PF00092.28 ORF100853 - 0.00042 20.6 0.0 0.00068 19.9 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF100853 - 0.0081 16.8 0.0 0.02 15.6 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 ORF100853 - 0.025 14.0 0.1 0.095 12.1 0.0 2.1 2 1 1 3 3 3 0 VWA domain containing CoxE-like protein MFS_1 PF07690.16 ORF99178 - 8e-23 80.9 29.8 8e-23 80.9 29.8 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF99178 - 1.1e-19 70.6 24.5 1.2e-16 60.6 4.4 2.2 1 1 0 2 2 2 2 Sugar (and other) transporter DUF3767 PF12597.8 ORF99178 - 0.019 14.7 1.4 0.49 10.2 1.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) SpoIIIAH PF12685.7 ORF98949 - 0.0001 22.2 0.1 0.00029 20.7 0.0 1.7 2 0 0 2 2 2 1 SpoIIIAH-like protein Oxidored_q3 PF00499.20 ORF98949 - 0.00022 21.0 6.4 0.0017 18.1 0.2 2.7 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Gaa1 PF04114.14 ORF98949 - 0.00032 19.9 0.6 0.24 10.4 0.0 2.3 2 0 0 2 2 2 2 Gaa1-like, GPI transamidase component DUF4834 PF16118.5 ORF98949 - 0.0014 19.6 0.1 0.0014 19.6 0.1 4.2 4 1 1 5 5 3 1 Domain of unknown function (DUF4834) SIT PF15330.6 ORF98949 - 0.0022 18.4 0.6 0.029 14.8 0.1 2.7 2 0 0 2 2 2 1 SHP2-interacting transmembrane adaptor protein, SIT Tim54 PF11711.8 ORF98949 - 0.0038 16.1 0.0 0.0056 15.5 0.0 1.3 1 0 0 1 1 1 1 Inner membrane protein import complex subunit Tim54 PBP1_TM PF14812.6 ORF98949 - 0.0043 17.4 4.1 0.045 14.1 3.9 2.5 2 0 0 2 2 2 1 Transmembrane domain of transglycosylase PBP1 at N-terminal CENP-B_dimeris PF09026.10 ORF98949 - 0.0048 17.3 3.0 0.0048 17.3 3.0 2.6 2 0 0 2 2 2 1 Centromere protein B dimerisation domain DUF3810 PF12725.7 ORF98949 - 0.012 14.9 10.2 0.1 11.9 0.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3810) Zip PF02535.22 ORF98949 - 0.014 14.7 0.0 0.033 13.4 0.0 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter Comm PF15957.5 ORF98949 - 0.041 14.2 7.5 0.53 10.6 0.1 4.0 4 0 0 4 4 4 0 Commissureless Afi1 PF07792.12 ORF98949 - 0.063 13.8 4.8 0.19 12.2 4.8 1.9 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking ETRAMP PF09716.10 ORF98949 - 0.076 13.1 3.8 2.1 8.4 2.0 3.6 2 1 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Connexin PF00029.19 ORF98949 - 0.087 12.6 6.1 0.051 13.3 1.0 2.9 2 1 1 3 3 3 0 Connexin DUF2207 PF09972.9 ORF98949 - 0.092 11.5 0.0 0.092 11.5 0.0 2.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) TRAP_alpha PF03896.16 ORF98949 - 0.14 11.3 6.0 1 8.5 3.3 2.7 3 0 0 3 3 3 0 Translocon-associated protein (TRAP), alpha subunit DUF2970 PF11174.8 ORF98949 - 0.23 11.3 0.0 0.23 11.3 0.0 3.2 4 0 0 4 4 2 0 Protein of unknown function (DUF2970) Adipogenin PF15202.6 ORF98949 - 0.25 11.4 0.0 0.25 11.4 0.0 3.4 5 1 0 5 5 3 0 Adipogenin Pex24p PF06398.11 ORF98949 - 0.53 9.2 5.0 5.7 5.8 5.0 2.4 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin Peptidase_S49_N PF08496.10 ORF98949 - 1.1 9.3 0.0 1.1 9.3 0.0 2.8 3 1 1 4 4 3 0 Peptidase family S49 N-terminal Tom22 PF04281.13 ORF98949 - 5.2 6.9 6.8 13 5.6 6.8 1.6 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 DNA_pol_phi PF04931.13 ORF98949 - 5.4 5.0 13.2 10 4.1 13.2 1.4 1 0 0 1 1 1 0 DNA polymerase phi EphA2_TM PF14575.6 ORF98949 - 5.5 7.9 15.2 2.6 9.0 0.5 5.1 2 2 1 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain DUF2147 PF09917.9 ORF95161 - 0.3 11.7 2.0 3.1 8.5 0.1 2.5 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2147) DUF4131 PF13567.6 ORF90841 - 0.43 10.2 2.4 5.5 6.6 3.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) DUF2569 PF10754.9 ORF90841 - 3.9 7.9 9.8 2 8.9 2.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2569) Helicase_C PF00271.31 ORF8301 - 8.1e-30 103.4 0.2 1.8e-29 102.3 0.1 1.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DbpA PF03880.15 ORF8301 - 6.6e-21 74.1 0.0 1.5e-20 72.9 0.0 1.7 1 0 0 1 1 1 1 DbpA RNA binding domain DEADboxA PF12343.8 ORF8301 - 2.3e-14 53.6 43.4 2.3e-14 53.6 43.4 2.6 2 0 0 2 2 2 1 Cold shock protein DEAD box A DUF4957 PF16318.5 ORF72009 - 0.056 13.4 3.0 0.23 11.4 0.5 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4957) DUF948 PF06103.11 ORF72009 - 0.16 12.2 1.4 0.54 10.6 0.3 2.4 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) TAFH PF07531.14 ORF72009 - 0.23 11.6 5.6 0.93 9.6 0.3 2.9 2 0 0 2 2 2 0 NHR1 homology to TAF Fez1 PF06818.15 ORF72009 - 0.8 10.1 26.2 4.4 7.7 26.2 2.1 1 1 0 1 1 1 0 Fez1 ATG16 PF08614.11 ORF72009 - 0.81 9.9 24.2 7.9 6.7 16.0 2.3 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) COG2 PF06148.11 ORF72009 - 3.4 7.8 15.6 0.39 10.8 6.2 2.6 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF812 PF05667.11 ORF6561 - 0.0016 17.4 31.5 0.0034 16.3 17.8 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF812) Spc7 PF08317.11 ORF6561 - 0.018 14.0 30.9 0.28 10.0 11.7 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein ATG16 PF08614.11 ORF6561 - 1 9.5 31.1 1.6 8.9 15.3 2.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) MtrG PF04210.13 ORF6561 - 2.2 8.2 3.8 2.2 8.2 0.2 2.8 3 1 1 4 4 4 0 Tetrahydromethanopterin S-methyltransferase, subunit G THOC7 PF05615.13 ORF6561 - 7.5 6.8 23.9 0.061 13.6 6.2 3.1 2 1 0 2 2 2 0 Tho complex subunit 7 MFS_1 PF07690.16 ORF54740 - 8e-23 80.9 29.8 8e-23 80.9 29.8 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF54740 - 1.1e-19 70.6 24.5 1.2e-16 60.6 4.4 2.2 1 1 0 2 2 2 2 Sugar (and other) transporter DUF3767 PF12597.8 ORF54740 - 0.019 14.7 1.4 0.49 10.2 1.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) Amidohydro_1 PF01979.20 ORF46461 - 1.5e-24 86.9 0.0 1.3e-23 83.8 0.0 2.0 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 ORF46461 - 5.4e-05 22.9 2.3 0.0011 18.5 2.3 2.1 1 1 0 1 1 1 1 Amidohydrolase family Thioredoxin PF00085.20 ORF46286 - 2e-17 63.0 1.8 1.5e-07 31.3 0.2 3.3 3 0 0 3 3 3 3 Thioredoxin Thioredoxin_6 PF13848.6 ORF46286 - 7.5e-14 52.1 7.8 9.2e-05 22.4 0.0 3.6 2 1 2 4 4 4 4 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF46286 - 6.5e-05 23.2 4.9 0.36 11.2 0.0 3.7 3 1 0 3 3 3 3 Thioredoxin-like OST3_OST6 PF04756.13 ORF46286 - 0.0041 16.5 3.1 3.5 6.9 0.0 3.5 2 1 1 3 3 3 2 OST3 / OST6 family, transporter family HyaE PF07449.11 ORF46286 - 0.018 15.0 0.0 1.2 9.1 0.0 2.5 2 0 0 2 2 2 0 Hydrogenase-1 expression protein HyaE RNA_pol_Rpb2_4 PF04566.13 ORF43666 - 0.19 12.0 1.2 3.6 8.0 0.5 2.8 2 0 0 2 2 2 0 RNA polymerase Rpb2, domain 4 LETM1 PF07766.13 ORF43368 - 2.7e-13 49.9 0.4 2.7e-13 49.9 0.4 2.0 2 0 0 2 2 2 1 LETM1-like protein NYD-SP28_assoc PF14775.6 ORF4185 - 6.6e-07 29.3 0.4 6.6e-07 29.3 0.4 4.3 5 0 0 5 5 5 2 Sperm tail C-terminal domain Ribosomal_S10 PF00338.22 ORF4185 - 0.0094 16.2 1.0 0.13 12.6 1.1 2.5 2 0 0 2 2 2 1 Ribosomal protein S10p/S20e PKK PF12474.8 ORF4185 - 0.047 13.8 0.6 0.047 13.8 0.6 5.2 2 1 4 6 6 6 0 Polo kinase kinase DUF1640 PF07798.11 ORF4185 - 0.054 13.5 34.0 0.022 14.8 8.3 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1640) Baculo_PEP_C PF04513.12 ORF4185 - 0.45 10.6 5.3 2.5 8.1 0.2 3.4 1 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus HrpB2 PF09487.10 ORF4185 - 0.91 10.0 3.4 0.52 10.7 0.6 2.0 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB2) OSTMP1 PF09777.9 ORF4185 - 1.1 8.6 8.7 0.44 9.9 6.2 1.6 2 0 0 2 2 2 0 Osteopetrosis-associated transmembrane protein 1 precursor DUF3970 PF13113.6 ORF4185 - 1.7 8.9 8.8 0.24 11.7 0.3 3.7 2 2 2 4 4 4 0 Protein of unknown function (DUF3970) PspB PF06667.12 ORF4185 - 2 8.5 5.2 0.99 9.5 0.4 2.9 2 1 0 2 2 2 0 Phage shock protein B Lustrin_cystein PF14625.6 ORF39859 - 0.037 14.4 3.2 0.18 12.2 3.2 2.2 1 0 0 1 1 1 0 Lustrin, cysteine-rich repeated domain SKG6 PF08693.10 ORF39859 - 0.088 12.2 0.3 0.2 11.1 0.3 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain TMEM154 PF15102.6 ORF39859 - 0.11 12.3 2.0 0.15 11.9 0.0 2.2 3 0 0 3 3 3 0 TMEM154 protein family Syndecan PF01034.20 ORF39859 - 0.21 11.5 0.9 0.58 10.1 0.9 1.8 1 0 0 1 1 1 0 Syndecan domain Adeno_E3_CR2 PF02439.15 ORF39859 - 1.6 8.5 10.5 4.5 7.1 10.5 1.7 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 CAP_N PF01213.19 ORF39859 - 1.8 8.0 6.2 2.9 7.3 6.2 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Trypan_PARP PF05887.11 ORF39859 - 9 6.3 11.4 0.069 13.1 0.6 2.3 2 1 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) Pkinase PF00069.25 ORF3982 - 2.3e-40 138.7 0.0 3.4e-40 138.1 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF3982 - 1.1e-31 110.0 0.0 1.7e-31 109.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF3982 - 5.1e-07 29.3 0.0 1.6e-06 27.7 0.0 1.8 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF3982 - 0.00087 18.2 0.0 0.0056 15.5 0.0 1.9 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF3982 - 0.08 12.3 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Peptidase_S28 PF05577.12 ORF34883 - 4.4e-49 167.4 0.0 5.5e-49 167.1 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Peptidase_S37 PF05576.11 ORF34883 - 0.0013 17.5 0.0 0.051 12.2 0.0 2.1 2 0 0 2 2 2 2 PS-10 peptidase S37 Peptidase_S9 PF00326.21 ORF34883 - 0.0017 17.9 0.0 0.0025 17.3 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 ORF34883 - 0.0085 15.8 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF34883 - 0.032 13.5 0.0 0.049 12.9 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Glyco_hydro_1 PF00232.18 ORF23181 - 5.7e-115 384.3 0.3 6.4e-115 384.1 0.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 Abhydro_lipase PF04083.16 ORF19781 - 3.5e-17 61.7 0.0 6.1e-17 60.9 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF19781 - 8.3e-05 22.3 0.2 0.0008 19.1 0.1 2.0 2 0 0 2 2 2 1 alpha/beta hydrolase fold HEPN_Toprim_N PF18871.1 ORF141601 - 0.0012 18.9 3.2 0.11 12.4 0.0 2.2 1 1 1 2 2 2 2 HEPN/Toprim N-terminal domain 1 DUF5606 PF18347.1 ORF141601 - 0.11 12.7 0.5 0.24 11.6 0.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5606) Lip_prot_lig_C PF10437.9 ORF128454 - 2.2e-18 66.0 0.0 3.1e-17 62.3 0.0 2.2 2 0 0 2 2 2 1 Bacterial lipoate protein ligase C-terminus BPL_LplA_LipB PF03099.19 ORF128454 - 1.3e-09 38.1 0.0 5.3e-09 36.1 0.0 1.9 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family LETM1 PF07766.13 ORF125667 - 2.7e-13 49.9 0.4 2.7e-13 49.9 0.4 2.0 2 0 0 2 2 2 1 LETM1-like protein PK_C PF02887.16 ORF12204 - 8.4 6.7 6.9 0.93 9.7 0.7 2.5 3 0 0 3 3 3 0 Pyruvate kinase, alpha/beta domain Methyltransf_2 PF00891.18 ORF119928 - 5.2e-15 55.3 0.0 7.1e-15 54.9 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Dimerisation2 PF16864.5 ORF119928 - 1.7e-13 50.4 0.2 2.9e-13 49.6 0.2 1.4 1 0 0 1 1 1 1 Dimerisation domain Methyltransf_12 PF08242.12 ORF119928 - 7e-07 29.9 0.0 1.2e-06 29.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF119928 - 2.3e-06 27.5 0.0 3.6e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF119928 - 6.6e-06 26.7 0.0 1.3e-05 25.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF119928 - 0.00014 22.4 0.0 0.00027 21.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF119928 - 0.0033 17.2 0.0 0.019 14.7 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF119928 - 0.0098 15.3 0.0 0.016 14.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family He_PIG PF05345.12 ORF116352 - 0.00074 19.7 2.4 0.0025 18.0 1.5 2.3 2 0 0 2 2 2 1 Putative Ig domain fn3_3 PF14686.6 ORF116352 - 0.029 14.1 1.4 0.096 12.5 1.4 1.9 1 0 0 1 1 1 0 Polysaccharide lyase family 4, domain II PSS PF03034.15 ORF11560 - 9.5e-58 196.1 12.0 5e-56 190.5 12.0 2.2 1 1 0 1 1 1 1 Phosphatidyl serine synthase NTP_transf_2 PF01909.23 ORF114914 - 0.0024 18.1 0.0 0.0046 17.2 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF1657 PF07870.11 ORF114914 - 6.7 6.7 5.8 23 5.0 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1657) PSII PF00421.19 ORF113811 - 6.9e-121 404.4 4.3 7.8e-121 404.2 4.3 1.0 1 0 0 1 1 1 1 Photosystem II protein CAP PF00188.26 ORF112701 - 2.7e-07 31.5 1.8 2.5e-06 28.3 0.1 2.3 2 0 0 2 2 2 1 Cysteine-rich secretory protein family FSA_C PF10479.9 ORF112701 - 8.1 4.4 11.9 12 3.8 11.9 1.3 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Lustrin_cystein PF14625.6 ORF112605 - 0.036 14.4 3.2 0.18 12.2 3.2 2.2 1 0 0 1 1 1 0 Lustrin, cysteine-rich repeated domain TMEM154 PF15102.6 ORF112605 - 0.049 13.5 0.4 0.15 11.9 0.0 2.0 2 0 0 2 2 2 0 TMEM154 protein family SKG6 PF08693.10 ORF112605 - 0.086 12.3 0.3 0.2 11.1 0.3 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Syndecan PF01034.20 ORF112605 - 0.21 11.5 0.9 0.58 10.1 0.9 1.8 1 0 0 1 1 1 0 Syndecan domain Trypan_PARP PF05887.11 ORF112605 - 0.25 11.3 6.3 0.069 13.1 0.6 2.3 2 0 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) Adeno_E3_CR2 PF02439.15 ORF112605 - 1.6 8.5 10.5 4.5 7.1 10.5 1.7 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 CAP_N PF01213.19 ORF112605 - 1.8 8.0 6.2 2.9 7.3 6.2 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal PSS PF03034.15 ORF111502 - 9.5e-58 196.1 12.0 5e-56 190.5 12.0 2.2 1 1 0 1 1 1 1 Phosphatidyl serine synthase Tox-REase-2 PF15646.6 ORF111285 - 2.8 8.1 6.3 1.2 9.3 2.8 1.9 2 0 0 2 2 2 0 Restriction endonuclease fold toxin 2 DcuA_DcuB PF03605.14 ORF11119 - 7.6e-127 423.2 13.9 8.9e-127 423.0 13.9 1.0 1 0 0 1 1 1 1 Anaerobic c4-dicarboxylate membrane transporter CitMHS PF03600.16 ORF11119 - 0.032 13.4 23.4 0.06 12.5 23.4 1.5 1 1 0 1 1 1 0 Citrate transporter PX PF00787.24 ORF111102 - 1.3e-13 50.9 0.0 3.4e-13 49.6 0.0 1.8 1 0 0 1 1 1 1 PX domain DUF4473 PF14747.6 ORF111102 - 0.57 10.8 6.0 9.5 6.9 0.3 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4473) FlxA PF14282.6 ORF111102 - 1.1 9.3 6.6 4.5 7.3 3.1 2.6 2 1 0 2 2 2 0 FlxA-like protein DUF1664 PF07889.12 ORF111102 - 1.6 8.8 15.0 4.8 7.2 1.1 4.1 2 1 2 4 4 4 0 Protein of unknown function (DUF1664) DUF724 PF05266.14 ORF111102 - 1.8 8.4 9.1 0.26 11.1 1.5 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DASH_Dam1 PF08653.10 ORF111102 - 2.1 8.2 6.7 12 5.8 0.3 3.4 3 1 0 3 3 3 0 DASH complex subunit Dam1 DUF1196 PF06709.11 NODE_14107_length_1183_cov_57.648084_g10586_i0forward_frame_3 - 0.1 12.8 0.8 2.8 8.2 0.2 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1196) PilJ PF13675.6 ORF96852 - 0.0027 17.7 1.1 0.15 12.1 0.0 3.2 2 1 1 3 3 3 1 Type IV pili methyl-accepting chemotaxis transducer N-term DUF445 PF04286.12 ORF96852 - 0.0052 16.6 1.1 0.01 15.7 0.7 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF445) Lebercilin PF15619.6 ORF96852 - 0.0066 16.1 2.4 0.0066 16.1 2.4 2.5 3 1 0 3 3 3 1 Ciliary protein causing Leber congenital amaurosis disease DUF745 PF05335.13 ORF96852 - 0.024 14.3 18.5 0.12 12.0 5.8 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF745) HSL_N PF06350.12 ORF96852 - 0.033 13.2 1.1 0.17 10.9 0.5 2.1 1 1 1 2 2 2 0 Hormone-sensitive lipase (HSL) N-terminus Pkinase PF00069.25 ORF96257 - 5.2e-74 248.9 0.0 6.4e-74 248.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF96257 - 6.6e-37 127.2 0.0 8.7e-37 126.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF96257 - 0.00013 21.6 0.2 0.14 11.7 0.2 2.2 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF96257 - 0.0046 15.8 0.0 0.0073 15.1 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase TMF_DNA_bd PF12329.8 ORF93148 - 1.4e-06 28.2 28.3 2e-05 24.5 5.2 4.8 3 2 1 4 4 3 2 TATA element modulatory factor 1 DNA binding ZapB PF06005.12 ORF93148 - 4.1e-06 27.1 26.3 0.0071 16.8 4.0 5.3 3 2 2 5 5 5 2 Cell division protein ZapB ATG16 PF08614.11 ORF93148 - 0.00034 20.9 31.6 0.043 14.0 6.3 3.8 2 2 2 4 4 4 3 Autophagy protein 16 (ATG16) ADIP PF11559.8 ORF93148 - 0.0013 18.8 31.7 0.024 14.7 15.7 3.6 1 1 1 3 3 3 2 Afadin- and alpha -actinin-Binding Syntaxin-6_N PF09177.11 ORF93148 - 0.0018 18.8 15.8 0.053 14.1 5.2 4.1 3 2 1 4 4 4 2 Syntaxin 6, N-terminal Fez1 PF06818.15 ORF93148 - 0.0021 18.5 22.7 0.19 12.2 3.6 3.4 1 1 2 3 3 3 2 Fez1 Cast PF10174.9 ORF93148 - 0.0023 16.3 25.7 0.028 12.7 0.2 2.8 1 1 1 2 2 2 2 RIM-binding protein of the cytomatrix active zone DUF3450 PF11932.8 ORF93148 - 0.003 16.9 2.9 0.003 16.9 2.9 3.4 2 1 1 3 3 3 2 Protein of unknown function (DUF3450) Spc7 PF08317.11 ORF93148 - 0.0044 15.9 31.7 0.24 10.2 15.1 3.8 1 1 2 3 3 3 2 Spc7 kinetochore protein Tropomyosin_1 PF12718.7 ORF93148 - 0.0064 16.7 31.9 0.024 14.8 0.6 4.3 2 2 2 4 4 4 1 Tropomyosin like KASH_CCD PF14662.6 ORF93148 - 0.016 15.0 34.3 0.17 11.7 7.2 4.0 1 1 3 4 4 4 0 Coiled-coil region of CCDC155 or KASH Filament PF00038.21 ORF93148 - 0.018 14.6 30.5 2.5 7.6 21.2 3.8 1 1 0 2 2 2 0 Intermediate filament protein CENP-F_leu_zip PF10473.9 ORF93148 - 0.018 15.0 29.9 0.49 10.4 0.3 4.9 2 2 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BCAS2 PF05700.11 ORF93148 - 0.022 14.4 1.4 0.022 14.4 1.4 3.3 4 0 0 4 4 4 0 Breast carcinoma amplified sequence 2 (BCAS2) FPP PF05911.11 ORF93148 - 0.022 13.0 23.4 0.16 10.2 2.5 2.7 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil GIT_CC PF16559.5 ORF93148 - 0.024 14.5 1.0 0.024 14.5 1.0 3.9 3 1 1 4 4 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor HAUS-augmin3 PF14932.6 ORF93148 - 0.027 14.1 20.7 0.028 14.0 9.5 3.1 2 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 UPF0242 PF06785.11 ORF93148 - 0.03 14.4 31.3 0.24 11.5 1.3 3.5 1 1 3 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 ORF93148 - 0.05 12.9 22.3 1.1 8.5 7.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Spc42p PF11544.8 ORF93148 - 0.09 12.8 17.8 0.21 11.6 4.0 4.9 1 1 3 5 5 4 0 Spindle pole body component Spc42p Jnk-SapK_ap_N PF09744.9 ORF93148 - 0.092 13.0 23.9 0.071 13.3 11.6 3.4 2 1 1 3 3 3 0 JNK_SAPK-associated protein-1 PKcGMP_CC PF16808.5 ORF93148 - 0.12 12.3 0.1 0.12 12.3 0.1 5.5 6 0 0 6 6 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Atg14 PF10186.9 ORF93148 - 0.12 11.4 28.9 0.041 13.0 13.6 3.0 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5082 PF16888.5 ORF93148 - 0.14 12.4 22.2 2.6 8.3 7.6 4.4 3 2 1 4 4 4 0 Domain of unknown function (DUF5082) APG6_N PF17675.1 ORF93148 - 0.16 12.5 32.9 0.11 13.1 15.6 4.3 1 1 2 3 3 3 0 Apg6 coiled-coil region HIP1_clath_bdg PF16515.5 ORF93148 - 0.17 12.5 25.5 1.5 9.4 0.1 4.8 2 2 3 5 5 5 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Nup54 PF13874.6 ORF93148 - 0.18 11.9 21.0 0.79 9.8 0.2 3.0 3 1 0 4 4 2 0 Nucleoporin complex subunit 54 bZIP_1 PF00170.21 ORF93148 - 0.18 11.9 20.2 0.23 11.6 1.9 6.3 4 3 4 8 8 6 0 bZIP transcription factor YabA PF06156.13 ORF93148 - 0.18 12.4 23.9 9.7 6.9 13.0 5.3 1 1 3 4 4 4 0 Initiation control protein YabA DUF2125 PF09898.9 ORF93148 - 0.22 11.1 0.7 0.45 10.1 0.4 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2125) DivIC PF04977.15 ORF93148 - 0.26 11.1 28.7 0.078 12.8 3.0 5.6 3 2 2 5 5 5 0 Septum formation initiator DUF4349 PF14257.6 ORF93148 - 0.36 10.2 20.1 3.2 7.2 0.1 4.6 3 2 1 4 4 4 0 Domain of unknown function (DUF4349) DASH_Dam1 PF08653.10 ORF93148 - 0.39 10.6 6.4 1.3 8.8 0.3 4.2 3 1 1 4 4 4 0 DASH complex subunit Dam1 FlaC_arch PF05377.11 ORF93148 - 0.42 11.0 21.9 0.81 10.1 0.2 6.2 5 3 3 8 8 7 0 Flagella accessory protein C (FlaC) Utp12 PF04003.12 ORF93148 - 0.54 10.6 4.4 1.1 9.6 0.1 3.1 3 0 0 3 3 2 0 Dip2/Utp12 Family Sec2p PF06428.11 ORF93148 - 0.67 10.0 22.5 0.56 10.2 1.7 5.3 4 1 1 5 5 5 0 GDP/GTP exchange factor Sec2p DUF390 PF04094.14 ORF93148 - 0.75 8.0 15.8 1.1 7.4 15.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF390) ABC_tran_CTD PF16326.5 ORF93148 - 0.75 10.1 23.6 0.89 9.9 0.6 5.2 4 2 1 5 5 4 0 ABC transporter C-terminal domain FlgM PF04316.13 ORF93148 - 0.84 10.0 0.1 0.84 10.0 0.1 3.1 3 1 0 3 3 2 0 Anti-sigma-28 factor, FlgM USP8_interact PF08941.10 ORF93148 - 0.87 9.4 12.5 21 4.9 8.4 3.5 3 1 1 4 4 4 0 USP8 interacting PI3K_P85_iSH2 PF16454.5 ORF93148 - 0.92 9.1 23.6 0.17 11.5 10.7 4.1 1 1 3 4 4 4 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Lipoprotein_20 PF13942.6 ORF93148 - 1.2 9.1 11.8 0.14 12.1 4.0 2.9 2 1 1 3 3 3 0 YfhG lipoprotein DUF724 PF05266.14 ORF93148 - 1.5 8.7 19.9 1.1 9.1 8.7 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF724) Laminin_II PF06009.12 ORF93148 - 2 8.4 20.9 1.1 9.3 0.2 4.0 2 2 2 4 4 4 0 Laminin Domain II Fib_alpha PF08702.10 ORF93148 - 2.2 8.5 25.4 1.3 9.2 0.5 4.4 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 ORF93148 - 2.6 8.1 20.2 3.9 7.5 0.5 4.6 1 1 5 6 6 6 0 Protein of unknown function (DUF1664) SHE3 PF17078.5 ORF93148 - 2.6 7.7 29.7 0.094 12.4 4.4 4.0 1 1 3 4 4 4 0 SWI5-dependent HO expression protein 3 SlyX PF04102.12 ORF93148 - 2.9 8.6 26.0 13 6.5 0.5 5.8 4 2 2 6 6 5 0 SlyX Lebercilin PF15619.6 ORF93148 - 3.1 7.4 36.5 1.5 8.4 6.3 3.9 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease Herpes_UL6 PF01763.16 ORF93148 - 3.3 6.1 14.4 0.1 11.1 7.1 2.1 2 1 0 2 2 2 0 Herpesvirus UL6 like DUF948 PF06103.11 ORF93148 - 3.5 8.0 11.8 8.3 6.7 5.6 3.7 4 1 0 4 4 2 0 Bacterial protein of unknown function (DUF948) T2SSF PF00482.23 ORF93148 - 3.8 7.5 5.9 5.3 7.0 1.2 2.9 3 1 0 3 3 2 0 Type II secretion system (T2SS), protein F Csm1_N PF18504.1 ORF93148 - 4.3 7.7 26.0 0.25 11.7 0.6 5.2 3 3 2 5 5 4 0 Csm1 N-terminal domain Troponin PF00992.20 ORF93148 - 4.5 7.6 24.0 0.78 10.0 9.6 3.5 3 1 0 3 3 3 0 Troponin BLOC1_2 PF10046.9 ORF93148 - 4.8 7.6 17.8 1.9 8.8 1.3 4.2 2 1 2 4 4 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 PRKG1_interact PF15898.5 ORF93148 - 5.2 8.0 28.2 28 5.7 0.9 4.7 1 1 4 5 5 5 0 cGMP-dependent protein kinase interacting domain CENP-Q PF13094.6 ORF93148 - 5.6 7.1 29.6 4.4 7.5 1.5 3.9 2 2 1 3 3 3 0 CENP-Q, a CENPA-CAD centromere complex subunit Cnn_1N PF07989.11 ORF93148 - 7.5 6.8 25.5 6.3 7.0 10.9 4.6 3 2 1 4 4 4 0 Centrosomin N-terminal motif 1 SPAM PF02090.15 ORF93148 - 8.8 6.1 18.1 0.2 11.4 9.2 2.7 3 0 0 3 3 3 0 Salmonella surface presentation of antigen gene type M protein Sushi PF00084.20 ORF92046 - 1.4e-14 54.4 15.9 0.0013 19.3 0.2 5.5 5 0 0 5 5 5 5 Sushi repeat (SCR repeat) CK_II_beta PF01214.18 ORF92046 - 0.1 12.4 0.8 0.21 11.4 0.1 1.7 1 1 1 2 2 2 0 Casein kinase II regulatory subunit Defensin_beta_2 PF13841.6 ORF92046 - 4.5 7.9 8.1 41 4.8 1.2 3.6 2 0 0 2 2 2 0 Beta defensin ERGIC_N PF13850.6 ORF90987 - 0.038 14.3 0.4 0.23 11.8 0.1 2.4 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) MbeD_MobD PF04899.12 ORF86051 - 1.8 8.7 9.1 10 6.3 1.9 3.4 2 1 1 3 3 3 0 MbeD/MobD like TcpQ PF10671.9 ORF8604 - 0.021 14.9 0.1 0.059 13.5 0.1 1.7 1 0 0 1 1 1 0 Toxin co-regulated pilus biosynthesis protein Q Trp_Tyr_perm PF03222.13 ORF8304 - 7.8e-137 456.5 30.0 6.2e-136 453.5 18.5 2.0 1 1 1 2 2 2 2 Tryptophan/tyrosine permease family Abhydrolase_9_N PF15420.6 ORF8304 - 7.7 6.5 11.3 20 5.1 3.3 3.2 2 1 1 3 3 3 0 Alpha/beta-hydrolase family N-terminus MORN PF02493.20 ORF82591 - 2.2e-15 55.5 36.6 0.0026 17.6 0.1 9.4 10 0 0 10 10 10 6 MORN repeat Ala_racemase_N PF01168.20 ORF78826 - 2.7e-19 69.7 0.0 3.7e-19 69.3 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain D-ser_dehydrat PF14031.6 ORF78826 - 1.7e-13 51.0 0.0 4.2e-13 49.8 0.0 1.7 1 0 0 1 1 1 1 Putative serine dehydratase domain Somatomedin_B PF01033.17 ORF51223 - 9.4e-05 22.7 12.8 0.00021 21.6 12.8 1.6 1 0 0 1 1 1 1 Somatomedin B domain AAA PF00004.29 ORF43627 - 3.6e-45 153.6 0.1 1.3e-44 151.8 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 ORF43627 - 1.1e-10 41.3 0.1 8.3e-10 38.5 0.0 2.3 2 0 0 2 2 2 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 ORF43627 - 3.7e-09 36.2 0.0 1.1e-08 34.8 0.0 1.8 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 ORF43627 - 4.8e-08 33.3 0.4 1.1e-07 32.1 0.0 1.8 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 ORF43627 - 7.2e-08 32.5 0.2 2.5e-07 30.8 0.2 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF43627 - 2.8e-06 27.8 0.1 0.00039 20.8 0.0 2.8 2 1 1 3 3 3 1 AAA ATPase domain DUF815 PF05673.13 ORF43627 - 6.9e-06 25.4 0.1 2.9e-05 23.4 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF815) RuvB_N PF05496.12 ORF43627 - 3.3e-05 23.7 0.0 9.5e-05 22.2 0.0 1.8 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF43627 - 5.7e-05 23.4 2.9 0.0018 18.5 0.0 2.9 2 1 1 3 3 2 1 AAA domain AAA_18 PF13238.6 ORF43627 - 0.00012 22.6 0.0 0.00028 21.4 0.0 1.7 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF43627 - 0.0003 21.1 0.0 0.0007 20.0 0.0 1.6 1 0 0 1 1 1 1 RNA helicase AAA_28 PF13521.6 ORF43627 - 0.00048 20.4 0.0 0.0022 18.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 ORF43627 - 0.00094 18.6 1.1 0.0031 16.9 0.0 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 ORF43627 - 0.0013 18.5 0.0 0.0028 17.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein NTPase_1 PF03266.15 ORF43627 - 0.0014 18.6 0.0 0.15 12.0 0.0 2.9 3 0 0 3 3 3 1 NTPase AAA_33 PF13671.6 ORF43627 - 0.0024 18.1 0.0 0.0053 16.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 ORF43627 - 0.0032 16.7 0.0 0.013 14.8 0.0 2.0 2 0 0 2 2 2 1 TIP49 P-loop domain TsaE PF02367.17 ORF43627 - 0.0037 17.3 0.0 0.0077 16.2 0.0 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 ORF43627 - 0.0073 16.0 0.2 0.017 14.9 0.1 1.7 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 ORF43627 - 0.0087 16.0 0.4 0.12 12.3 0.1 2.6 3 0 0 3 3 3 1 NACHT domain AAA_14 PF13173.6 ORF43627 - 0.01 15.8 0.1 0.04 13.9 0.0 1.9 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 ORF43627 - 0.016 15.0 0.9 0.077 12.7 0.0 2.5 3 1 0 3 3 2 0 Sigma-54 interaction domain AAA_3 PF07726.11 ORF43627 - 0.017 15.0 0.1 0.088 12.7 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 ORF43627 - 0.02 14.4 0.1 0.053 13.0 0.1 1.7 1 1 0 1 1 1 0 P-loop containing dynein motor region Parvo_NS1 PF01057.17 ORF43627 - 0.02 14.0 0.0 0.045 12.8 0.0 1.5 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 ORF43627 - 0.029 13.9 0.4 0.12 11.9 0.1 1.9 1 1 1 2 2 2 0 AAA domain AAA_30 PF13604.6 ORF43627 - 0.038 13.7 0.3 0.15 11.8 0.3 2.1 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 ORF43627 - 0.045 13.2 0.0 0.91 8.9 0.0 2.6 3 0 0 3 3 2 0 Bacterial TniB protein AAA_11 PF13086.6 ORF43627 - 0.058 13.2 0.1 0.19 11.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF43627 - 0.069 12.6 0.0 0.2 11.1 0.0 1.7 1 0 0 1 1 1 0 PhoH-like protein NB-ARC PF00931.22 ORF43627 - 0.08 12.1 0.0 0.29 10.3 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain ATPase_2 PF01637.18 ORF43627 - 0.089 12.7 0.4 0.41 10.5 0.0 2.3 2 1 0 2 2 1 0 ATPase domain predominantly from Archaea AAA_17 PF13207.6 ORF43627 - 0.093 13.2 0.1 0.34 11.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 ORF43627 - 0.14 12.7 0.3 0.49 10.9 0.0 2.3 2 2 0 2 2 2 0 ABC transporter ATPase PF06745.13 ORF43627 - 0.15 11.4 2.3 0.51 9.7 0.0 2.6 3 0 0 3 3 3 0 KaiC HIP1_clath_bdg PF16515.5 ORF43627 - 0.3 11.7 3.8 1.9 9.2 2.9 2.3 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DnaJ PF00226.31 ORF41747 - 1.1e-19 70.3 0.2 1.9e-19 69.5 0.2 1.4 1 0 0 1 1 1 1 DnaJ domain Beta_helix PF13229.6 ORF41747 - 3.3e-09 36.8 0.6 1e-08 35.2 0.6 1.7 1 1 0 1 1 1 1 Right handed beta helix region WW PF00397.26 ORF41747 - 7.3e-06 26.0 0.1 1.7e-05 24.8 0.1 1.7 1 0 0 1 1 1 1 WW domain Pectate_lyase_3 PF12708.7 ORF41747 - 0.00093 19.1 0.0 0.0014 18.5 0.0 1.2 1 0 0 1 1 1 1 Pectate lyase superfamily protein DUF4957 PF16318.5 ORF41747 - 0.027 14.4 0.0 0.051 13.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) HA2 PF04408.23 ORF36763 - 5.7e-24 84.5 0.0 1.7e-23 83.0 0.0 1.8 2 0 0 2 2 2 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 ORF36763 - 2.8e-05 24.4 0.0 5.2e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold G-patch_2 PF12656.7 ORF34895 - 1.5e-15 57.0 0.0 3.5e-15 55.8 0.0 1.7 1 0 0 1 1 1 1 G-patch domain KOW PF00467.29 ORF34895 - 0.0011 18.9 2.9 0.034 14.1 0.4 2.7 2 0 0 2 2 2 2 KOW motif MFS_1 PF07690.16 ORF33056 - 2e-39 135.5 45.6 2e-39 135.5 45.6 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily TRI12 PF06609.13 ORF33056 - 3.1e-06 25.9 4.2 3.1e-06 25.9 4.2 1.7 2 0 0 2 2 2 1 Fungal trichothecene efflux pump (TRI12) MFS_3 PF05977.13 ORF33056 - 3.2e-06 25.8 5.6 3.2e-06 25.8 5.6 1.9 1 1 0 2 2 2 1 Transmembrane secretion effector DUF2530 PF10745.9 ORF33056 - 0.0097 16.1 1.0 0.0097 16.1 1.0 3.4 3 1 0 3 3 3 1 Protein of unknown function (DUF2530) MFS_1 PF07690.16 ORF31423 - 2e-10 40.2 24.2 2e-10 40.2 24.2 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily Peptidase_C1 PF00112.23 ORF28050 - 1.3e-55 188.8 4.6 2.2e-55 188.1 4.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF28050 - 3.7e-13 49.7 7.2 3.7e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Mito_morph_reg PF14972.6 ORF26456 - 0.0016 18.0 0.6 4.7 6.8 0.0 3.2 3 0 0 3 3 3 3 Mitochondrial morphogenesis regulator DUF4052 PF13261.6 ORF26456 - 0.18 11.6 0.0 0.27 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4052) DUF3410 PF11890.8 ORF25750 - 0.041 13.7 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) DUF3410 PF11890.8 ORF25115 - 0.041 13.7 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3410) Actin PF00022.19 ORF16113 - 3e-100 335.7 0.0 5.2e-99 331.6 0.0 1.9 1 1 0 1 1 1 1 Actin Metallophos PF00149.28 ORF150319 - 3.9e-17 63.4 6.1 6.4e-17 62.7 6.1 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF150319 - 7.1e-05 23.1 0.2 0.00092 19.4 0.2 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_C PF14008.6 ORF150319 - 0.11 13.4 0.2 0.44 11.4 0.0 2.1 2 0 0 2 2 2 0 Iron/zinc purple acid phosphatase-like protein C RRM_1 PF00076.22 ORF142135 - 2.9e-28 97.5 4.7 2.3e-15 56.2 0.7 2.9 2 1 1 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF142135 - 4.4e-08 33.1 0.4 0.00018 21.5 0.1 3.0 2 1 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 ORF142135 - 0.029 14.3 0.2 6.3 6.9 0.0 2.4 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif HlyIII PF03006.20 ORF134418 - 1.3e-49 168.9 21.7 2.1e-49 168.3 21.7 1.3 1 1 0 1 1 1 1 Haemolysin-III related MerC PF03203.14 ORF134418 - 0.013 16.0 9.2 0.031 14.7 1.2 3.2 1 1 2 3 3 3 0 MerC mercury resistance protein DUF962 PF06127.11 ORF134418 - 0.013 15.6 3.3 0.39 10.8 3.3 2.9 1 1 0 1 1 1 0 Protein of unknown function (DUF962) DUF4538 PF15061.6 ORF134418 - 0.51 10.1 0.0 0.51 10.1 0.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4538) FixQ PF05545.11 ORF134418 - 2.9 7.9 8.8 6.5 6.8 0.1 3.8 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ DctQ PF04290.12 ORF134418 - 5.7 6.9 11.8 0.15 12.0 0.5 3.1 3 1 1 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF3290 PF11694.8 ORF134418 - 9.1 6.3 10.4 0.088 12.8 1.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3290) Arrestin_N PF00339.29 ORF132882 - 4.4e-09 36.5 0.0 7.9e-09 35.7 0.0 1.4 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Arrestin_C PF02752.22 ORF132882 - 2.5e-06 28.0 0.0 3.5e-05 24.3 0.0 2.1 2 0 0 2 2 2 1 Arrestin (or S-antigen), C-terminal domain ADK PF00406.22 ORF129633 - 3.1e-38 131.2 0.2 2.9e-33 115.1 0.0 2.2 2 0 0 2 2 2 2 Adenylate kinase AAA_17 PF13207.6 ORF129633 - 2.5e-18 66.8 0.2 1.1e-17 64.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF129633 - 4.8e-08 33.6 0.0 1.6e-07 32.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain Hydin_ADK PF17213.3 ORF129633 - 0.001 19.4 1.1 0.52 10.6 0.1 2.3 1 1 1 2 2 2 2 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 ORF129633 - 0.0014 18.8 0.1 0.006 16.8 0.0 2.1 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 ORF129633 - 0.011 16.1 0.0 0.03 14.7 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 ORF129633 - 0.038 13.7 0.3 4.9 6.8 0.0 2.8 2 1 1 3 3 3 0 Thymidylate kinase Metallophos PF00149.28 ORF12914 - 2.1e-31 110.0 0.7 1.1e-30 107.6 0.2 1.9 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Ribosomal_L18 PF17135.4 ORF12914 - 0.054 12.9 0.0 0.36 10.2 0.0 2.1 2 1 0 2 2 2 0 Ribosomal protein 60S L18 and 50S L18e BOF PF04076.13 ORF12914 - 0.13 12.4 0.4 17 5.5 0.2 2.4 2 0 0 2 2 2 0 Bacterial OB fold (BOF) protein PSS PF03034.15 ORF126574 - 2.6e-89 299.6 13.8 4.2e-89 298.9 13.8 1.3 1 0 0 1 1 1 1 Phosphatidyl serine synthase 7TMR-DISM_7TM PF07695.11 ORF126574 - 0.68 9.8 36.4 0.28 11.1 5.7 3.4 2 1 0 3 3 3 0 7TM diverse intracellular signalling TrkH PF02386.16 ORF125569 - 8.4e-71 238.9 7.6 1.1e-70 238.5 7.6 1.1 1 0 0 1 1 1 1 Cation transport protein Peptidase_U4 PF03419.13 ORF125569 - 0.036 13.4 3.5 0.26 10.6 0.1 2.2 2 0 0 2 2 2 0 Sporulation factor SpoIIGA PIRT PF15099.6 ORF125569 - 0.46 10.1 1.9 1.2 8.7 1.9 1.6 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family tRNA-synt_2 PF00152.20 ORF123336 - 2.2e-84 283.2 0.0 2.8e-84 282.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF123336 - 0.0046 16.5 0.2 0.015 14.8 0.0 1.8 3 0 0 3 3 3 1 tRNA synthetases class II core domain (F) FAM176 PF14851.6 ORF116602 - 0.026 14.2 0.0 0.052 13.2 0.0 1.4 1 0 0 1 1 1 0 FAM176 family He_PIG PF05345.12 ORF116602 - 0.026 14.7 3.2 0.035 14.3 0.2 2.9 3 1 0 3 3 3 0 Putative Ig domain Pkinase PF00069.25 ORF113074 - 7.8e-73 245.1 0.2 9.8e-73 244.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF113074 - 1.4e-34 119.5 0.0 1.8e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF113074 - 9.9e-07 28.3 0.0 2.6e-05 23.7 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EB PF01683.18 ORF104145 - 0.48 10.8 26.9 2 8.8 8.4 4.2 2 1 1 3 3 3 0 EB module PKD_channel PF08016.12 ORF10392 - 1e-17 64.0 19.4 6.1e-17 61.4 19.3 1.9 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF10392 - 6.6e-16 58.3 18.6 9.1e-16 57.8 18.6 1.2 1 0 0 1 1 1 1 Ion transport protein UCH PF00443.29 ORF103119 - 1.3e-06 28.1 0.7 1.3e-06 28.1 0.7 1.8 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase Ank_2 PF12796.7 ORF102611 - 3.3e-73 242.3 16.5 1.2e-16 61.0 1.3 6.1 1 1 5 6 6 6 6 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF102611 - 1.2e-58 194.4 23.8 4.3e-09 36.5 0.0 11.2 1 1 11 12 12 12 12 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF102611 - 2.6e-56 187.3 15.7 1.3e-09 38.4 0.5 7.9 4 3 4 8 8 8 8 Ankyrin repeats (many copies) Ank PF00023.30 ORF102611 - 3.1e-53 176.0 30.3 0.00027 21.2 0.1 12.1 11 1 1 12 12 12 12 Ankyrin repeat Ank_3 PF13606.6 ORF102611 - 6.3e-49 158.3 14.2 0.0053 17.2 0.0 12.1 11 1 1 12 12 12 12 Ankyrin repeat Trp_halogenase PF04820.14 ORF102611 - 0.14 11.0 1.5 1.8 7.3 0.2 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Cyclin_N PF00134.23 ORF102611 - 0.16 11.7 2.5 76 3.1 0.0 5.1 3 3 3 7 7 7 0 Cyclin, N-terminal domain Mak_N_cap PF18085.1 ORF102611 - 0.99 10.5 5.2 1e+02 4.1 0.0 4.7 1 1 3 4 4 4 0 Maltokinase N-terminal cap domain bZIP_2 PF07716.15 ORF102018 - 0.037 14.1 1.4 0.037 14.1 1.4 4.8 4 3 2 6 6 6 0 Basic region leucine zipper NPV_P10 PF05531.12 ORF102018 - 0.18 12.3 16.2 1.7 9.1 1.0 4.0 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein IFT57 PF10498.9 ORF102018 - 0.4 9.6 29.0 0.3 10.0 10.3 2.2 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Fez1 PF06818.15 ORF102018 - 4 7.8 35.7 8.6 6.8 14.7 2.3 1 1 1 2 2 2 0 Fez1 APG6_N PF17675.1 ORF102018 - 4.1 7.9 49.5 3.8 8.1 21.9 3.3 1 1 2 3 3 3 0 Apg6 coiled-coil region DUF4201 PF13870.6 ORF102018 - 4.3 7.0 35.6 0.56 9.9 22.3 3.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) GAS PF13851.6 ORF102018 - 5.6 6.3 42.7 0.056 12.8 25.7 2.7 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding NinG PF05766.12 NODE_14154_length_1181_cov_96.718150_g10624_i0forward_frame_2 - 0.11 12.4 4.1 1 9.3 1.5 2.7 2 0 0 2 2 2 0 Bacteriophage Lambda NinG protein Peptidase_C1 PF00112.23 ORF98153 - 1.3e-55 188.8 4.6 2.2e-55 188.1 4.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF98153 - 3.7e-13 49.7 7.2 3.7e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Thiolase_N PF00108.23 ORF96823 - 5e-86 288.3 0.6 8.5e-86 287.5 0.6 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF96823 - 3.8e-43 146.1 1.0 6.7e-43 145.3 0.2 1.8 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF96823 - 2.7e-07 30.4 1.5 8.7e-07 28.8 1.5 2.0 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain ADP_ribosyl_GH PF03747.14 ORF94271 - 1.5e-53 182.4 0.0 1.8e-53 182.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Rick_17kDa_Anti PF05433.15 ORF94271 - 1.6 8.7 6.9 1.5 8.7 0.7 2.4 2 0 0 2 2 2 0 Glycine zipper 2TM domain Pkinase PF00069.25 ORF88 - 6.5e-53 179.8 0.2 6.5e-53 179.8 0.2 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF88 - 1.6e-37 129.2 0.1 1.6e-37 129.2 0.1 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF88 - 3.6e-09 36.3 0.4 6.9e-09 35.4 0.0 1.8 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF88 - 2.5e-05 23.4 0.1 2.5e-05 23.4 0.1 2.2 2 0 0 2 2 2 1 Haspin like kinase domain Kdo PF06293.14 ORF88 - 0.00051 19.5 0.2 0.00087 18.7 0.2 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family TED PF08341.11 ORF88 - 0.0053 17.1 0.5 0.015 15.6 0.5 1.8 1 0 0 1 1 1 1 Thioester domain FTA2 PF13095.6 ORF88 - 0.14 11.8 3.6 0.15 11.7 0.1 2.1 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 RMP PF14996.6 ORF88 - 1.8 8.7 8.0 1.8 8.7 0.1 2.5 2 0 0 2 2 2 0 Retinal Maintenance CDP-OH_P_transf PF01066.21 ORF81812 - 3.8e-17 62.8 0.1 3.8e-17 62.8 0.1 3.6 3 1 0 3 3 3 1 CDP-alcohol phosphatidyltransferase DUF1129 PF06570.11 ORF81812 - 0.61 9.5 7.2 0.29 10.6 0.2 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) DUF1422 PF07226.11 ORF81812 - 2.7 8.0 12.1 0.33 11.0 0.1 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF1422) Cortexin PF11057.8 ORF81812 - 3.6 7.5 7.4 0.31 10.9 0.4 2.5 3 0 0 3 3 3 0 Cortexin of kidney YchF-GTPase_C PF06071.13 ORF68046 - 1.5e-40 137.2 2.3 1.7e-40 137.1 0.2 2.2 2 1 0 2 2 2 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 ORF68046 - 7.4e-23 80.8 0.0 2e-22 79.4 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF68046 - 6.7e-06 25.7 0.0 1.4e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF68046 - 1.8e-05 24.9 0.7 0.13 12.3 0.0 3.3 1 1 2 3 3 3 2 Dynamin family MeaB PF03308.16 ORF68046 - 4.5e-05 22.6 0.0 8.1e-05 21.7 0.0 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 ORF68046 - 0.014 15.9 0.2 0.05 14.1 0.0 2.0 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 ORF68046 - 0.062 13.8 0.0 0.3 11.6 0.0 2.0 1 1 0 1 1 1 0 ABC transporter RsgA_GTPase PF03193.16 ORF68046 - 0.1 12.5 0.1 0.33 10.8 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase Pyr_redox_2 PF07992.14 ORF63124 - 3.3e-51 174.3 0.0 4.2e-51 173.9 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rbx_binding PF18113.1 ORF63124 - 2e-21 75.5 0.0 4.9e-21 74.3 0.0 1.7 1 0 0 1 1 1 1 Rubredoxin binding C-terminal domain Pyr_redox PF00070.27 ORF63124 - 4.7e-18 65.5 0.0 8.6e-17 61.5 0.0 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF63124 - 2.4e-14 53.3 0.0 2.9e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF63124 - 4.1e-10 39.8 1.4 0.021 14.4 0.4 3.2 2 1 1 3 3 3 3 FAD dependent oxidoreductase K_oxygenase PF13434.6 ORF63124 - 7.9e-10 38.4 0.1 5.1e-06 25.9 0.0 3.2 1 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 ORF63124 - 1e-05 24.5 1.8 0.19 10.4 0.0 3.1 2 1 1 3 3 3 3 HI0933-like protein NAD_binding_7 PF13241.6 ORF63124 - 1.4e-05 25.4 0.0 0.0012 19.3 0.0 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding NAD_binding_9 PF13454.6 ORF63124 - 0.00015 21.8 3.8 0.58 10.1 0.0 3.7 3 1 0 4 4 4 2 FAD-NAD(P)-binding 3HCDH_N PF02737.18 ORF63124 - 0.00088 19.2 0.0 0.0029 17.5 0.0 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 ORF63124 - 0.0017 18.6 0.1 0.23 11.7 0.0 2.7 2 1 0 2 2 2 1 TrkA-N domain Lycopene_cycl PF05834.12 ORF63124 - 0.0019 17.3 2.1 2.5 7.0 0.0 3.1 2 1 0 3 3 3 2 Lycopene cyclase protein ThiF PF00899.21 ORF63124 - 0.0032 16.8 0.1 0.0058 16.0 0.1 1.3 1 0 0 1 1 1 1 ThiF family GIDA PF01134.22 ORF63124 - 0.0061 15.7 0.7 0.12 11.4 0.3 2.3 2 1 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 ORF63124 - 0.012 14.9 1.7 0.029 13.6 0.3 2.2 2 1 1 3 3 3 0 FAD binding domain NAD_binding_8 PF13450.6 ORF63124 - 0.017 15.4 0.1 0.089 13.0 0.0 2.3 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 ORF63124 - 0.043 13.2 1.0 2.3 7.5 0.4 2.7 3 0 0 3 3 3 0 FAD dependent oxidoreductase ApbA PF02558.16 ORF63124 - 0.061 13.0 1.2 0.24 11.0 0.3 2.3 3 0 0 3 3 3 0 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 ORF63124 - 0.11 13.1 0.2 17 6.1 0.0 2.6 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 ORF63124 - 0.11 11.7 0.0 0.98 8.7 0.0 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain CDP-OH_P_transf PF01066.21 ORF55632 - 3.8e-17 62.8 0.1 3.8e-17 62.8 0.1 3.6 3 1 0 3 3 3 1 CDP-alcohol phosphatidyltransferase DUF1129 PF06570.11 ORF55632 - 0.61 9.5 7.2 0.29 10.6 0.2 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) DUF1422 PF07226.11 ORF55632 - 2.7 8.0 12.1 0.33 11.0 0.1 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF1422) Cortexin PF11057.8 ORF55632 - 3.6 7.5 7.4 0.31 10.9 0.4 2.5 3 0 0 3 3 3 0 Cortexin of kidney Abhydro_lipase PF04083.16 ORF54385 - 3e-18 65.1 0.3 6.3e-18 64.1 0.3 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF54385 - 4.6e-05 22.8 0.0 0.012 14.9 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF54385 - 7.5e-05 22.5 1.5 0.00021 21.0 1.5 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold LeuA_dimer PF08502.10 ORF45174 - 5.8e-36 123.3 0.4 1e-35 122.5 0.4 1.4 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain HMGL-like PF00682.19 ORF45174 - 4.6e-33 114.9 0.6 8.7e-33 114.0 0.6 1.5 1 0 0 1 1 1 1 HMGL-like Cyclin PF08613.11 ORF41025 - 6.8e-12 46.1 2.3 2.2e-11 44.4 2.3 2.2 1 1 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF41025 - 0.00015 21.5 0.2 0.00033 20.4 0.2 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain tRNA-synt_1b PF00579.25 ORF40435 - 6.9e-61 206.1 0.0 9.5e-61 205.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Hydrolase PF00702.26 ORF38192 - 1e-05 25.9 0.0 1.5e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.21 ORF38192 - 2.5e-05 24.1 8.2 2.5e-05 24.1 8.2 1.5 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus DUF373 PF04123.13 ORF38192 - 0.033 13.6 6.8 0.21 11.0 6.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF373) DUF4549 PF15082.6 ORF28806 - 0.02 14.7 1.1 0.073 12.9 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4549) Peptidase_C1 PF00112.23 ORF28442 - 1.3e-55 188.8 4.6 2.2e-55 188.1 4.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF28442 - 3.7e-13 49.7 7.2 3.7e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Glyco_hydro_7 PF00840.20 ORF28023 - 1.8e-138 461.9 1.7 2.3e-138 461.6 1.7 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 7 Duffy_binding PF05424.11 ORF28023 - 0.16 12.0 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Duffy binding domain PC4 PF02229.16 ORF28023 - 0.17 11.5 0.0 0.77 9.4 0.0 2.0 2 0 0 2 2 2 0 Transcriptional Coactivator p15 (PC4) YchF-GTPase_C PF06071.13 ORF152531 - 1.5e-40 137.2 2.3 1.7e-40 137.1 0.2 2.2 2 1 0 2 2 2 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 ORF152531 - 7.4e-23 80.8 0.0 2e-22 79.4 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF152531 - 6.7e-06 25.7 0.0 1.4e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF152531 - 1.8e-05 24.9 0.7 0.13 12.3 0.0 3.3 1 1 2 3 3 3 2 Dynamin family MeaB PF03308.16 ORF152531 - 4.5e-05 22.6 0.0 8.1e-05 21.7 0.0 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 ORF152531 - 0.014 15.9 0.2 0.05 14.1 0.0 2.0 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 ORF152531 - 0.062 13.8 0.0 0.3 11.6 0.0 2.0 1 1 0 1 1 1 0 ABC transporter RsgA_GTPase PF03193.16 ORF152531 - 0.1 12.5 0.1 0.33 10.8 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase PhoH PF02562.16 ORF148615 - 8.7e-96 319.3 0.0 1.1e-95 318.9 0.0 1.1 1 0 0 1 1 1 1 PhoH-like protein AAA_30 PF13604.6 ORF148615 - 1.8e-09 37.6 0.0 2.8e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF148615 - 0.00015 22.1 0.1 0.00054 20.3 0.1 1.8 1 1 0 1 1 1 1 AAA domain DEAD PF00270.29 ORF148615 - 0.002 17.9 0.0 0.0051 16.6 0.0 1.7 1 1 0 1 1 1 1 DEAD/DEAH box helicase IstB_IS21 PF01695.17 ORF148615 - 0.0021 17.8 0.0 0.0063 16.3 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF148615 - 0.008 16.5 0.0 0.023 15.0 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF148615 - 0.014 15.0 0.0 0.029 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zot PF05707.12 ORF148615 - 0.071 12.7 0.0 7.1 6.2 0.0 2.4 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) CDP-OH_P_transf PF01066.21 ORF147722 - 3.8e-17 62.8 0.1 3.8e-17 62.8 0.1 3.3 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DUF1129 PF06570.11 ORF147722 - 0.85 9.1 7.1 0.4 10.1 0.9 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1129) DUF1422 PF07226.11 ORF147722 - 1.1 9.3 10.2 0.33 11.0 0.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1422) Cortexin PF11057.8 ORF147722 - 2.3 8.1 5.7 0.31 10.9 0.4 2.3 3 0 0 3 3 3 0 Cortexin of kidney EamA PF00892.20 ORF146771 - 3.6e-13 49.9 28.6 1.1e-06 28.9 9.1 2.1 2 0 0 2 2 2 2 EamA-like transporter family Peptidase_C1 PF00112.23 ORF145068 - 1.3e-55 188.8 4.6 2.2e-55 188.1 4.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF145068 - 3.7e-13 49.7 7.2 3.7e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Coprogen_oxidas PF01218.18 ORF141179 - 8.6e-114 379.2 1.2 1e-113 379.0 1.2 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase Excalibur PF05901.11 ORF141179 - 0.017 15.7 0.0 0.056 14.1 0.0 1.9 1 0 0 1 1 1 0 Excalibur calcium-binding domain SBDS PF01172.18 ORF136692 - 8.5e-28 96.3 1.4 3e-27 94.5 1.4 2.0 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 ORF136692 - 2.7e-22 79.0 1.8 2.7e-22 79.0 1.8 2.1 3 0 0 3 3 3 1 SBDS protein C-terminal domain zf-C2H2_jaz PF12171.8 ORF136692 - 0.0013 19.0 1.0 0.0032 17.7 1.0 1.7 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding PI3K_rbd PF00794.18 ORF136692 - 0.036 14.2 0.1 0.13 12.5 0.1 1.9 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain AAA_16 PF13191.6 ORF136692 - 0.18 12.1 0.0 0.51 10.7 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain ABC_tran PF00005.27 ORF136692 - 1.8 9.1 5.3 0.67 10.5 0.9 2.5 1 1 1 2 2 2 0 ABC transporter EIF_2_alpha PF07541.12 ORF136692 - 7.5 6.7 10.4 0.18 11.9 2.9 2.4 2 2 0 2 2 2 0 Eukaryotic translation initiation factor 2 alpha subunit Actin PF00022.19 ORF135812 - 7.6e-134 446.4 0.0 2.8e-133 444.5 0.0 1.7 1 1 0 1 1 1 1 Actin Coprogen_oxidas PF01218.18 ORF134424 - 8.6e-114 379.2 1.2 1e-113 379.0 1.2 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase Excalibur PF05901.11 ORF134424 - 0.017 15.7 0.0 0.056 14.1 0.0 1.9 1 0 0 1 1 1 0 Excalibur calcium-binding domain Ribosomal_S6e PF01092.19 ORF13192 - 0.09 12.8 0.2 9.2 6.3 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein S6e PCI PF01399.27 ORF131403 - 1.6e-21 76.8 0.3 6e-21 74.9 0.3 1.9 1 0 0 1 1 1 1 PCI domain Rpn3_C PF08375.11 ORF131403 - 3.3e-15 56.3 0.3 7.6e-15 55.1 0.3 1.6 1 0 0 1 1 1 1 Proteasome regulatory subunit C-terminal CSN8_PSD8_EIF3K PF10075.9 ORF131403 - 0.05 13.6 0.3 0.39 10.7 0.3 2.3 1 1 0 1 1 1 0 CSN8/PSMD8/EIF3K family PAM2 PF07145.15 ORF131403 - 0.46 10.3 2.7 13 5.8 0.2 2.5 2 0 0 2 2 2 0 Ataxin-2 C-terminal region Abhydro_lipase PF04083.16 ORF126315 - 2.8e-18 65.2 0.3 6.3e-18 64.1 0.3 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF126315 - 1.5e-06 28.1 0.6 0.00076 19.2 0.3 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF126315 - 4.1e-05 23.0 0.0 0.18 11.0 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Alpha-amylase PF00128.24 ORF125085 - 1.7e-48 166.0 1.7 6.8e-48 163.9 1.7 1.8 1 1 0 1 1 1 1 Alpha amylase, catalytic domain SH3_13 PF18335.1 ORF125085 - 0.022 14.6 0.0 0.17 11.7 0.0 2.3 2 0 0 2 2 2 0 ATP-dependent RecD-like DNA helicase SH3 domain TRM PF02005.16 ORF124531 - 1.6e-14 53.9 0.0 6e-14 52.0 0.0 1.7 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase RCC1_2 PF13540.6 ORF119408 - 5.7e-18 64.2 27.1 0.19 11.6 0.0 9.3 9 0 0 9 9 9 9 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF119408 - 1.5e-09 38.2 4.1 9.7 6.2 0.1 8.1 8 1 0 8 8 8 1 Uncharacterised ACR, YagE family COG1723 FtsQ PF03799.15 ORF119408 - 9.1e-06 26.5 0.1 11 6.8 0.0 6.0 1 1 5 7 7 7 1 Cell division protein FtsQ XRCC1_N PF01834.16 ORF119408 - 0.003 17.6 2.0 39 4.2 0.0 5.3 1 1 5 7 7 7 0 XRCC1 N terminal domain Spectrin PF00435.21 ORF119408 - 0.0041 17.6 0.0 33 5.0 0.0 5.6 6 1 1 7 7 7 0 Spectrin repeat Flavodoxin_3 PF12641.7 ORF119408 - 0.0087 15.8 0.0 39 3.9 0.0 4.7 2 2 4 6 6 6 0 Flavodoxin domain bPH_2 PF03703.14 ORF119408 - 0.025 14.8 0.2 7.7 6.8 0.0 3.4 3 0 0 3 3 3 0 Bacterial PH domain zinc_ribbon_13 PF09855.9 ORF119408 - 0.037 14.2 0.6 34 4.7 0.0 4.4 5 0 0 5 5 5 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) DNA_ligase_A_C PF04679.15 ORF119408 - 0.039 14.5 0.1 9.7 6.9 0.0 3.4 2 2 0 3 3 3 0 ATP dependent DNA ligase C terminal region Methyltransf_29 PF03141.16 ORF119408 - 0.049 12.2 3.4 7.9 4.9 0.0 4.0 6 1 1 7 7 7 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Lipase_GDSL_2 PF13472.6 ORF114721 - 1.1e-05 25.9 0.0 6e-05 23.5 0.0 2.0 2 0 0 2 2 2 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 ORF114721 - 0.054 13.5 0.0 0.12 12.3 0.0 1.6 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase UQ_con PF00179.26 ORF113088 - 8.1e-09 35.2 0.0 1.3e-07 31.4 0.0 2.3 2 0 0 2 2 2 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF113088 - 0.0044 16.7 0.0 0.012 15.3 0.0 1.8 1 0 0 1 1 1 1 Prokaryotic E2 family B CAF1 PF04857.20 ORF113088 - 0.036 13.3 1.5 0.047 12.9 1.5 1.1 1 0 0 1 1 1 0 CAF1 family ribonuclease RWD PF05773.22 ORF113088 - 0.11 12.7 3.2 0.33 11.3 2.6 2.1 1 1 1 2 2 2 0 RWD domain LETM1 PF07766.13 ORF113088 - 0.23 10.8 10.3 0.36 10.1 10.3 1.2 1 0 0 1 1 1 0 LETM1-like protein HTH_57 PF18679.1 ORF113088 - 0.33 11.3 2.0 0.9 9.9 2.0 1.7 1 0 0 1 1 1 0 ThcOx helix turn helix domain PEHE PF15275.6 ORF113088 - 0.66 10.6 4.7 1.1 9.9 4.7 1.3 1 0 0 1 1 1 0 PEHE domain Exonuc_VII_L PF02601.15 ORF113088 - 0.71 9.4 5.5 1 8.8 5.5 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit S-AdoMet_synt_C PF02773.16 ORF105890 - 1.7e-63 212.7 0.1 4.9e-63 211.2 0.0 1.8 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 ORF105890 - 6.4e-40 136.1 0.0 1.3e-39 135.1 0.0 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 ORF105890 - 5.1e-32 110.5 0.1 1.3e-31 109.2 0.0 1.7 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 ORF105890 - 0.083 11.7 0.7 0.27 10.0 0.1 1.9 1 1 1 2 2 2 0 S-adenosylmethionine synthetase (AdoMet synthetase) CPSase_C PF18302.1 ORF10585 - 0.38 11.3 1.3 1.1 9.9 1.3 1.8 1 0 0 1 1 1 0 Carbamoyl phosphate synthetase C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks37.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks37.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks37.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks37.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:16:21 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PfkB PF00294.24 NODE_73873_length_213_cov_3.471910_g65932_i0forward_frame_1 - 0.026 13.8 0.0 0.026 13.8 0.0 1.0 1 0 0 1 1 1 0 pfkB family carbohydrate kinase WIF PF02019.18 NODE_73866_length_213_cov_3.775281_g65925_i0reverse_frame_1 - 0.012 15.3 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 WIF domain DOG1 PF14144.6 NODE_73866_length_213_cov_3.775281_g65925_i0forward_frame_1 - 0.016 15.4 0.0 0.026 14.8 0.0 1.3 1 0 0 1 1 1 0 Seed dormancy control cPLA2_C2 PF18695.1 NODE_73866_length_213_cov_3.775281_g65925_i0forward_frame_1 - 0.18 11.8 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Cytosolic phospholipases A2 C2-domain Tobravirus_2B PF05271.11 NODE_73863_length_213_cov_4.151685_g65922_i0forward_frame_1 - 0.044 13.7 0.1 0.053 13.4 0.1 1.1 1 0 0 1 1 1 0 Tobravirus 2B protein Adaptin_binding PF10199.9 NODE_73859_length_213_cov_12.629213_g65918_i0reverse_frame_1 - 0.039 14.6 0.4 0.065 13.9 0.4 1.5 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 HeLo PF14479.6 NODE_73859_length_213_cov_12.629213_g65918_i0reverse_frame_1 - 0.076 12.8 1.9 0.084 12.7 1.9 1.0 1 0 0 1 1 1 0 Prion-inhibition and propagation UL41A PF17591.2 NODE_73852_length_213_cov_21.140449_g65911_i0reverse_frame_1 - 0.025 14.7 0.4 0.031 14.4 0.4 1.2 1 0 0 1 1 1 0 Herpesvirus UL41A DUF3709 PF12493.8 NODE_73844_length_213_cov_31.331461_g65903_i0forward_frame_1 - 0.0088 16.1 0.3 0.017 15.2 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3709) Orthopox_C10L PF07020.11 NODE_73835_length_213_cov_39.887640_g65894_i0forward_frame_1 - 0.1 13.4 0.5 0.13 13.1 0.5 1.1 1 0 0 1 1 1 0 Orthopoxvirus C10L protein CBS PF00571.28 NODE_73834_length_213_cov_42.623596_g65893_i0forward_frame_1 - 0.11 13.0 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 CBS domain Nod1 PF17114.5 NODE_73827_length_213_cov_47.382022_g65886_i0forward_frame_1 - 0.037 14.2 0.3 0.037 14.2 0.3 1.3 1 1 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 SfLAP PF11139.8 NODE_73826_length_213_cov_48.359551_g65885_i0forward_frame_1 - 0.026 13.9 0.0 0.029 13.8 0.0 1.0 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein zf-SAP30 PF13866.6 NODE_73823_length_213_cov_50.544944_g65882_i0forward_frame_1 - 0.014 15.5 1.4 0.021 15.0 1.4 1.5 1 1 0 1 1 1 0 SAP30 zinc-finger DUF3043 PF11241.8 NODE_73816_length_213_cov_54.938202_g65875_i0reverse_frame_1 - 6.6 6.7 4.6 7.6 6.5 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) LHH PF14411.6 NODE_73816_length_213_cov_54.938202_g65875_i0forward_frame_1 - 0.72 10.1 5.0 0.17 12.1 1.7 1.6 2 0 0 2 2 2 0 A nuclease of the HNH/ENDO VII superfamily with conserved LHH Vps16_C PF04840.12 NODE_73815_length_213_cov_57.039326_g65874_i0forward_frame_1 - 0.09 11.8 0.1 0.099 11.7 0.1 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region Toxin_5 PF05294.13 NODE_73805_length_213_cov_75.747191_g65864_i0forward_frame_1 - 0.036 14.5 1.3 0.052 14.0 1.3 1.3 1 0 0 1 1 1 0 Scorpion short toxin Fibrillin_U_N PF18193.1 NODE_73803_length_213_cov_84.797753_g65862_i0forward_frame_1 - 0.057 13.5 0.6 0.11 12.7 0.6 1.6 1 0 0 1 1 1 0 Fibrillin 1 unique N-terminal domain Peptidase_C32 PF05411.12 NODE_73802_length_213_cov_85.151685_g65861_i0reverse_frame_1 - 0.033 14.1 0.0 0.061 13.3 0.0 1.3 1 1 0 1 1 1 0 Equine arteritis virus putative proteinase MIT_LIKE_ACTX PF17556.2 NODE_73794_length_213_cov_192.887640_g65853_i0reverse_frame_1 - 0.0072 16.9 2.1 0.0087 16.6 2.1 1.2 1 0 0 1 1 1 1 MIT-like atracotoxin family Cid2 PF09774.9 NODE_73791_length_213_cov_242.977528_g65850_i0reverse_frame_1 - 0.018 15.4 0.6 0.019 15.4 0.6 1.1 1 0 0 1 1 1 0 Caffeine-induced death protein 2 Rad9 PF04139.13 NODE_73789_length_213_cov_298.078652_g65848_i0reverse_frame_1 - 0.14 11.5 0.3 0.16 11.4 0.3 1.0 1 0 0 1 1 1 0 Rad9 TMEM100 PF16311.5 NODE_73789_length_213_cov_298.078652_g65848_i0forward_frame_1 - 0.044 13.4 0.0 0.044 13.4 0.0 1.9 1 1 1 2 2 2 0 Transmembrane protein 100 DUF4417 PF14386.6 NODE_73777_length_214_cov_0.893855_g65836_i0forward_frame_2 - 0.14 11.8 0.1 0.15 11.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4417) RE_BstXI PF09552.10 NODE_73776_length_214_cov_0.893855_g65835_i0reverse_frame_2 - 0.11 11.7 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 BstXI restriction endonuclease TUSC2 PF15000.6 NODE_73774_length_214_cov_0.893855_g65833_i0reverse_frame_3 - 0.047 14.0 0.1 0.052 13.8 0.1 1.1 1 0 0 1 1 1 0 Tumour suppressor candidate 2 Mid2 PF04478.12 NODE_73774_length_214_cov_0.893855_g65833_i0reverse_frame_3 - 0.062 13.1 0.0 0.07 13.0 0.0 1.0 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor SSXRD PF09514.10 NODE_73774_length_214_cov_0.893855_g65833_i0reverse_frame_3 - 0.11 12.1 1.7 0.16 11.6 0.3 1.9 2 0 0 2 2 2 0 SSXRD motif SWIM PF04434.17 NODE_73771_length_214_cov_0.893855_g65830_i0reverse_frame_3 - 3.5 7.4 10.8 4.1 7.2 0.6 2.4 1 1 1 2 2 2 0 SWIM zinc finger DUF3587 PF12132.8 NODE_73771_length_214_cov_0.893855_g65830_i0reverse_frame_3 - 6.6 6.1 7.8 18 4.7 7.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3587) Macscav_rec PF03523.13 NODE_73770_length_214_cov_0.893855_g65829_i0reverse_frame_2 - 0.022 14.6 0.3 0.034 14.0 0.3 1.3 1 0 0 1 1 1 0 Macrophage scavenger receptor IBV_3C PF03620.13 NODE_73770_length_214_cov_0.893855_g65829_i0reverse_frame_2 - 0.095 13.2 0.9 0.11 13.0 0.9 1.1 1 0 0 1 1 1 0 IBV 3C protein Sigma70_r1_1 PF03979.14 NODE_73764_length_214_cov_0.893855_g65823_i0reverse_frame_3 - 0.076 13.1 3.0 0.084 12.9 3.0 1.2 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 DUF4668 PF15701.5 NODE_73761_length_214_cov_0.893855_g65820_i0reverse_frame_2 - 0.12 12.2 0.6 0.13 12.1 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) DUF5539 PF17693.1 NODE_73759_length_214_cov_0.893855_g65818_i0forward_frame_2 - 0.048 13.3 0.0 0.057 13.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5539) MerE PF05052.12 NODE_73758_length_214_cov_0.972067_g65817_i0forward_frame_3 - 0.14 12.1 2.3 0.2 11.6 2.3 1.2 1 0 0 1 1 1 0 MerE protein Ferrochelatase PF00762.19 NODE_73756_length_214_cov_0.988827_g65815_i0reverse_frame_2 - 0.037 13.1 0.0 0.037 13.1 0.0 1.0 1 0 0 1 1 1 0 Ferrochelatase DNA_methylase PF00145.17 NODE_73753_length_214_cov_1.005587_g65812_i0forward_frame_3 - 4.7e-07 29.5 0.1 5.4e-07 29.3 0.1 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase HPPK PF01288.20 NODE_73746_length_214_cov_1.027933_g65805_i0reverse_frame_3 - 0.079 13.5 0.0 0.083 13.4 0.0 1.1 1 0 0 1 1 1 0 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HOCHOB PF17943.1 NODE_73735_length_214_cov_1.111732_g65794_i0forward_frame_2 - 0.53 11.0 5.1 0.61 10.8 5.1 1.2 1 0 0 1 1 1 0 Homeobox-cysteine loop-homeobox FAM27 PF15832.5 NODE_73734_length_214_cov_1.117318_g65793_i0reverse_frame_3 - 1.1 9.8 12.6 4.7 7.8 12.6 1.9 1 1 0 1 1 1 0 FAM27 D and E protein family Atrophin-1 PF03154.15 NODE_73734_length_214_cov_1.117318_g65793_i0reverse_frame_2 - 0.12 10.6 0.2 0.12 10.6 0.2 1.1 1 0 0 1 1 1 0 Atrophin-1 family FAM27 PF15832.5 NODE_73734_length_214_cov_1.117318_g65793_i0reverse_frame_2 - 0.17 12.4 5.4 0.2 12.2 5.4 1.3 1 1 0 1 1 1 0 FAM27 D and E protein family DUF4567 PF15131.6 NODE_73734_length_214_cov_1.117318_g65793_i0forward_frame_2 - 0.054 13.5 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4567) DUF3827 PF12877.7 NODE_73733_length_214_cov_1.117318_g65792_i0forward_frame_3 - 0.28 9.5 0.0 0.3 9.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) DUF4022 PF13214.6 NODE_73732_length_214_cov_1.117318_g65791_i0reverse_frame_3 - 0.089 13.1 0.4 0.089 13.1 0.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4022) DUF2537 PF10801.8 NODE_73731_length_214_cov_1.117318_g65790_i0forward_frame_2 - 0.42 10.9 2.4 0.5 10.6 2.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2537) DUF2039 PF10217.9 NODE_73729_length_214_cov_1.184358_g65788_i0reverse_frame_3 - 0.0083 16.4 1.0 0.011 16.1 1.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2039) Ustilago_mating PF05722.12 NODE_73728_length_214_cov_1.195531_g65787_i0reverse_frame_3 - 4.1 6.8 7.6 4.2 6.8 7.6 1.1 1 0 0 1 1 1 0 Ustilago B locus mating-type protein MFS_1 PF07690.16 NODE_73725_length_214_cov_1.229050_g65784_i0reverse_frame_3 - 0.0061 15.5 1.4 0.0071 15.3 1.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily IRK PF01007.20 NODE_73725_length_214_cov_1.229050_g65784_i0reverse_frame_2 - 0.15 11.9 2.7 0.18 11.7 2.7 1.2 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain Pentaxin PF00354.17 NODE_73724_length_214_cov_1.240223_g65783_i0forward_frame_3 - 0.12 12.0 0.7 0.12 12.0 0.7 1.0 1 0 0 1 1 1 0 Pentaxin family HAP2-GCS1 PF10699.9 NODE_73723_length_214_cov_1.245810_g65782_i0forward_frame_2 - 9.3e-09 35.1 0.0 1.3e-08 34.7 0.0 1.2 1 0 0 1 1 1 1 Male gamete fusion factor DUF4007 PF13182.6 NODE_73723_length_214_cov_1.245810_g65782_i0forward_frame_2 - 0.063 12.4 0.0 0.065 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4007) DUF2721 PF11026.8 NODE_73721_length_214_cov_1.268156_g65780_i0forward_frame_2 - 0.29 11.0 6.0 0.34 10.8 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) WD40 PF00400.32 NODE_73718_length_214_cov_1.284916_g65777_i0reverse_frame_3 - 0.00027 21.7 0.0 0.038 14.9 0.0 2.3 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF3915 PF13054.6 NODE_73715_length_214_cov_1.296089_g65774_i0reverse_frame_3 - 0.07 13.1 0.5 0.074 13.0 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_73715_length_214_cov_1.296089_g65774_i0reverse_frame_3 - 2.1 6.5 5.7 2.4 6.3 5.7 1.0 1 0 0 1 1 1 0 Atrophin-1 family MraZ PF02381.18 NODE_73714_length_214_cov_1.301676_g65773_i0forward_frame_3 - 0.065 13.2 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Eno-Rase_NADH_b PF12242.8 NODE_73712_length_214_cov_1.307263_g65771_i0reverse_frame_2 - 0.18 11.6 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DUF3413 PF11893.8 NODE_73708_length_214_cov_1.335196_g65767_i0forward_frame_2 - 4.7 6.3 11.9 5.2 6.2 11.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) zf-CCCH PF00642.24 NODE_73701_length_214_cov_1.340782_g65760_i0forward_frame_3 - 0.001 18.9 1.6 0.0014 18.5 1.6 1.2 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_73701_length_214_cov_1.340782_g65760_i0forward_frame_3 - 0.0014 18.6 4.8 0.0023 17.9 4.8 1.4 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_73701_length_214_cov_1.340782_g65760_i0forward_frame_3 - 0.02 15.6 0.1 0.021 15.5 0.1 1.1 1 0 0 1 1 1 0 Torus domain zf-CCCH_4 PF18044.1 NODE_73701_length_214_cov_1.340782_g65760_i0forward_frame_3 - 0.039 13.8 1.3 0.061 13.1 1.3 1.4 1 0 0 1 1 1 0 CCCH-type zinc finger ACC_epsilon PF13822.6 NODE_73698_length_214_cov_1.340782_g65757_i0reverse_frame_2 - 0.029 15.1 2.6 0.038 14.7 2.6 1.2 1 0 0 1 1 1 0 Acyl-CoA carboxylase epsilon subunit Cas9_C PF18525.1 NODE_73697_length_214_cov_1.340782_g65756_i0forward_frame_3 - 0.11 12.7 0.0 0.12 12.5 0.0 1.0 1 0 0 1 1 1 0 Cas9 C-terminal domain FANCM-MHF_bd PF16783.5 NODE_73696_length_214_cov_1.340782_g65755_i0forward_frame_3 - 0.019 15.1 1.3 0.021 14.9 1.3 1.1 1 0 0 1 1 1 0 FANCM to MHF binding domain DUF2476 PF10630.9 NODE_73694_length_214_cov_1.351955_g65753_i0forward_frame_3 - 7.3 6.6 10.3 9.9 6.2 10.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2476) DUF1933 PF09147.10 NODE_73693_length_214_cov_1.351955_g65752_i0forward_frame_2 - 0.044 13.4 0.0 0.052 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1933) ComZ PF10815.8 NODE_73691_length_214_cov_1.368715_g65750_i0forward_frame_2 - 0.024 14.6 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 ComZ ATP-cone PF03477.16 NODE_73690_length_214_cov_1.385475_g65749_i0reverse_frame_3 - 0.00023 21.7 0.0 0.00033 21.2 0.0 1.2 1 0 0 1 1 1 1 ATP cone domain DUF4732 PF15876.5 NODE_73688_length_214_cov_1.430168_g65747_i0forward_frame_3 - 0.22 11.6 1.1 0.25 11.4 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4732) DUF3209 PF11483.8 NODE_73687_length_214_cov_1.435754_g65746_i0reverse_frame_2 - 0.015 15.7 0.1 0.016 15.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3209) HSA PF07529.13 NODE_73686_length_214_cov_1.435754_g65745_i0reverse_frame_2 - 0.0078 16.5 1.8 0.0089 16.3 1.8 1.1 1 0 0 1 1 1 1 HSA Arm PF00514.23 NODE_73685_length_214_cov_1.435754_g65744_i0reverse_frame_3 - 0.084 13.0 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Armadillo/beta-catenin-like repeat FERM_C PF09380.10 NODE_73685_length_214_cov_1.435754_g65744_i0reverse_frame_2 - 0.031 14.7 0.1 0.036 14.5 0.1 1.2 1 0 0 1 1 1 0 FERM C-terminal PH-like domain DUF2106 PF09879.9 NODE_73684_length_214_cov_1.452514_g65743_i0reverse_frame_2 - 0.12 11.9 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2106) zf-TRM13_CCCH PF11722.8 NODE_73681_length_214_cov_1.469274_g65740_i0reverse_frame_3 - 0.18 11.6 6.3 0.19 11.5 1.4 2.4 2 0 0 2 2 2 0 CCCH zinc finger in TRM13 protein partial_CstF PF15861.5 NODE_73681_length_214_cov_1.469274_g65740_i0reverse_frame_2 - 0.01 15.6 0.1 0.015 15.0 0.1 1.3 1 0 0 1 1 1 1 Partial cleavage stimulation factor domain DUF3236 PF11576.8 NODE_73680_length_214_cov_1.469274_g65739_i0forward_frame_3 - 0.071 12.8 0.1 0.073 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3236) Cofilin_ADF PF00241.20 NODE_73675_length_214_cov_1.497207_g65734_i0reverse_frame_3 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Cofilin/tropomyosin-type actin-binding protein DUF4714 PF15833.5 NODE_73675_length_214_cov_1.497207_g65734_i0forward_frame_3 - 0.048 13.6 0.7 0.054 13.5 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) NSP10 PF09401.10 NODE_73675_length_214_cov_1.497207_g65734_i0forward_frame_2 - 0.0081 16.2 0.2 0.011 15.8 0.2 1.2 1 0 0 1 1 1 1 RNA synthesis protein NSP10 HisKA PF00512.25 NODE_73674_length_214_cov_1.508380_g65733_i0forward_frame_2 - 6.2e-11 42.2 0.2 6.6e-11 42.1 0.2 1.0 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain FdsD PF11390.8 NODE_73673_length_214_cov_1.513966_g65732_i0forward_frame_3 - 0.033 14.5 0.0 0.034 14.5 0.0 1.2 1 0 0 1 1 1 0 NADH-dependant formate dehydrogenase delta subunit FdsD zf-Sec23_Sec24 PF04810.15 NODE_73672_length_214_cov_1.519553_g65731_i0forward_frame_2 - 0.016 15.3 0.9 0.023 14.7 0.9 1.3 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger DUF1302 PF06980.11 NODE_73669_length_214_cov_1.536313_g65728_i0forward_frame_3 - 0.21 10.2 0.1 0.23 10.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1302) DUF1722 PF08349.11 NODE_73662_length_214_cov_1.575419_g65721_i0reverse_frame_3 - 0.0022 18.2 0.3 0.0023 18.2 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) Turandot PF07240.11 NODE_73662_length_214_cov_1.575419_g65721_i0reverse_frame_3 - 0.041 13.9 1.1 0.057 13.4 1.0 1.4 1 1 0 1 1 1 0 Stress-inducible humoral factor Turandot Dimer_Tnp_hAT PF05699.14 NODE_73662_length_214_cov_1.575419_g65721_i0reverse_frame_3 - 0.13 12.1 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region Dna2 PF08696.11 NODE_73659_length_214_cov_1.603352_g65718_i0reverse_frame_3 - 0.074 12.8 0.0 0.074 12.8 0.0 1.1 1 0 0 1 1 1 0 DNA replication factor Dna2 RNA_pol_Rpb2_1 PF04563.15 NODE_73657_length_214_cov_1.608939_g65716_i0reverse_frame_3 - 0.066 12.7 0.1 0.096 12.2 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase beta subunit U62_UL91 PF17442.2 NODE_73657_length_214_cov_1.608939_g65716_i0reverse_frame_3 - 0.087 12.8 0.3 0.22 11.5 0.2 1.7 1 1 1 2 2 2 0 Functional domain of U62 and UL91 proteins DUF4215 PF13948.6 NODE_73651_length_214_cov_1.675978_g65710_i0reverse_frame_3 - 4.1e-15 55.9 31.7 5.1e-11 42.8 17.8 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4215) Antistasin PF02822.14 NODE_73651_length_214_cov_1.675978_g65710_i0reverse_frame_3 - 1 10.1 19.1 22 5.8 8.4 3.2 2 1 0 2 2 2 0 Antistasin family Peptidase_M74 PF03411.13 NODE_73648_length_214_cov_1.709497_g65707_i0reverse_frame_2 - 0.0002 21.0 0.0 0.00027 20.6 0.0 1.2 1 0 0 1 1 1 1 Penicillin-insensitive murein endopeptidase T5orf172 PF10544.9 NODE_73646_length_214_cov_1.720670_g65705_i0forward_frame_3 - 0.059 13.9 0.1 0.067 13.7 0.1 1.1 1 0 0 1 1 1 0 T5orf172 domain NTP_transferase PF00483.23 NODE_73645_length_214_cov_1.731844_g65704_i0reverse_frame_2 - 1.3e-07 31.4 0.0 1.5e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase FOXP-CC PF16159.5 NODE_73643_length_214_cov_1.754190_g65702_i0forward_frame_3 - 0.11 13.1 0.9 0.15 12.8 0.9 1.2 1 0 0 1 1 1 0 FOXP coiled-coil domain Ribosomal_L14e PF01929.17 NODE_73642_length_214_cov_1.759777_g65701_i0reverse_frame_2 - 0.028 14.9 0.3 0.039 14.5 0.3 1.2 1 0 0 1 1 1 0 Ribosomal protein L14 CPP1-like PF11833.8 NODE_73642_length_214_cov_1.759777_g65701_i0reverse_frame_2 - 1.4 8.5 4.8 1.7 8.3 4.8 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like LPP PF04728.13 NODE_73640_length_214_cov_1.776536_g65699_i0forward_frame_3 - 0.013 15.9 0.2 0.021 15.2 0.2 1.4 1 0 0 1 1 1 0 Lipoprotein leucine-zipper HMMR_C PF15908.5 NODE_73640_length_214_cov_1.776536_g65699_i0forward_frame_3 - 0.034 14.4 0.5 0.087 13.1 0.5 1.6 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal CxxCxxCC PF03692.15 NODE_73637_length_214_cov_1.787709_g65696_i0reverse_frame_3 - 0.0023 18.6 0.3 0.0031 18.2 0.3 1.3 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain Pkinase PF00069.25 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 3.2e-18 66.1 0.2 3.5e-18 65.9 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 1.6e-08 34.1 0.0 1.8e-08 34.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 1.5e-05 25.1 0.0 1.5e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 4.3e-05 23.2 0.3 5.3e-05 22.9 0.3 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase Kdo PF06293.14 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 0.00033 20.1 0.1 0.00035 20.0 0.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 0.044 13.4 0.0 0.046 13.3 0.0 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 0.1 11.4 0.0 0.1 11.4 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase DUF1679 PF07914.11 NODE_73635_length_214_cov_1.793296_g65694_i0reverse_frame_3 - 0.11 11.4 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) zf_C2H2_13 PF18508.1 NODE_73635_length_214_cov_1.793296_g65694_i0forward_frame_2 - 0.015 14.8 0.5 0.022 14.4 0.5 1.2 1 0 0 1 1 1 0 Zinc finger domain Ribosomal_L28 PF00830.19 NODE_73635_length_214_cov_1.793296_g65694_i0forward_frame_2 - 0.05 13.8 0.1 0.075 13.2 0.1 1.3 1 0 0 1 1 1 0 Ribosomal L28 family GxGYxYP_C PF14323.6 NODE_73635_length_214_cov_1.793296_g65694_i0forward_frame_2 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 GxGYxYP putative glycoside hydrolase C-terminal domain Noelin-1 PF12308.8 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 0.033 14.2 1.6 0.042 13.8 0.8 1.5 1 1 0 1 1 1 0 Neurogenesis glycoprotein NRBF2 PF08961.10 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 0.18 11.4 6.5 0.2 11.2 6.5 1.2 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator DUF3015 PF11220.8 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 0.23 11.3 3.7 0.28 11.1 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3015) dCache_2 PF08269.11 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 4.4 6.4 11.6 4.5 6.4 11.6 1.0 1 0 0 1 1 1 0 Cache domain DUF4407 PF14362.6 NODE_73634_length_214_cov_1.804469_g65693_i0reverse_frame_2 - 6.9 5.9 10.2 7.9 5.7 10.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-HIT PF04438.16 NODE_73634_length_214_cov_1.804469_g65693_i0forward_frame_3 - 0.046 13.6 2.8 0.046 13.6 2.8 1.9 3 0 0 3 3 3 0 HIT zinc finger DIM PF08194.12 NODE_73627_length_214_cov_1.882682_g65686_i0reverse_frame_3 - 0.072 13.3 3.8 0.14 12.4 1.9 2.3 2 1 0 2 2 2 0 DIM protein PEGSRP PF07623.11 NODE_73627_length_214_cov_1.882682_g65686_i0forward_frame_3 - 0.2 11.5 0.2 0.2 11.5 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) MTA_R1 PF17226.2 NODE_73627_length_214_cov_1.882682_g65686_i0forward_frame_2 - 0.023 14.8 0.2 0.023 14.8 0.2 1.1 1 0 0 1 1 1 0 MTA R1 domain DUF3447 PF11929.8 NODE_73625_length_214_cov_1.905028_g65684_i0forward_frame_2 - 0.19 11.7 2.3 0.35 10.9 0.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3447) DUF4183 PF13799.6 NODE_73623_length_214_cov_1.932961_g65682_i0forward_frame_3 - 0.18 11.6 1.1 0.23 11.3 0.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4183) MPS-4 PF17523.2 NODE_73622_length_214_cov_1.955307_g65681_i0reverse_frame_3 - 0.057 13.5 0.6 0.069 13.3 0.6 1.2 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 MCU PF04678.13 NODE_73622_length_214_cov_1.955307_g65681_i0reverse_frame_3 - 0.21 11.7 0.0 0.26 11.4 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter CHASE7 PF17151.4 NODE_73621_length_214_cov_1.966480_g65680_i0forward_frame_3 - 0.13 11.8 0.3 0.14 11.7 0.3 1.0 1 0 0 1 1 1 0 Periplasmic sensor domain DUF1155 PF06633.11 NODE_73619_length_214_cov_1.983240_g65678_i0forward_frame_3 - 0.039 13.4 0.4 0.09 12.3 0.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1155) Sarcolipin PF05366.11 NODE_73617_length_214_cov_2.033520_g65676_i0reverse_frame_2 - 0.99 9.2 3.3 1.1 9.0 1.3 2.0 2 0 0 2 2 2 0 Sarcolipin MAGP PF05507.11 NODE_73615_length_214_cov_2.094972_g65674_i0reverse_frame_2 - 0.89 10.0 10.3 1.2 9.6 10.3 1.4 1 1 0 1 1 1 0 Microfibril-associated glycoprotein (MAGP) PTS_2-RNA PF01885.16 NODE_73614_length_214_cov_2.100559_g65673_i0reverse_frame_2 - 1e-05 25.6 0.0 1.1e-05 25.6 0.0 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family OST-HTH PF12872.7 NODE_73614_length_214_cov_2.100559_g65673_i0reverse_frame_2 - 0.14 12.0 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 OST-HTH/LOTUS domain Shikimate_DH PF01488.20 NODE_73613_length_214_cov_2.111732_g65672_i0reverse_frame_2 - 0.14 12.2 0.1 0.16 12.1 0.1 1.0 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF3270 PF11674.8 NODE_73613_length_214_cov_2.111732_g65672_i0forward_frame_3 - 0.065 13.4 6.5 0.069 13.3 6.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) DUF2721 PF11026.8 NODE_73613_length_214_cov_2.111732_g65672_i0forward_frame_3 - 0.17 11.8 3.2 0.19 11.6 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Amnionless PF14828.6 NODE_73610_length_214_cov_2.156425_g65669_i0reverse_frame_3 - 0.0035 16.3 0.3 0.0035 16.2 0.3 1.0 1 0 0 1 1 1 1 Amnionless YdjM PF04307.14 NODE_73607_length_214_cov_2.206704_g65666_i0reverse_frame_3 - 0.017 14.4 0.3 0.018 14.4 0.3 1.1 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase VGLL4 PF15245.6 NODE_73607_length_214_cov_2.206704_g65666_i0forward_frame_3 - 0.49 10.4 4.1 0.7 9.9 4.1 1.1 1 0 0 1 1 1 0 Transcription cofactor vestigial-like protein 4 PglL_A PF15864.5 NODE_73604_length_214_cov_2.268156_g65663_i0forward_frame_3 - 0.031 14.0 0.3 0.059 13.1 0.3 1.4 1 0 0 1 1 1 0 Protein glycosylation ligase zf-CHC2 PF01807.20 NODE_73602_length_214_cov_2.273743_g65661_i0forward_frame_2 - 0.026 14.3 0.2 0.027 14.3 0.2 1.2 1 0 0 1 1 1 0 CHC2 zinc finger DUF4131 PF13567.6 NODE_73595_length_214_cov_2.502793_g65654_i0reverse_frame_3 - 0.016 14.9 2.0 0.017 14.8 2.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Wzy_C PF04932.15 NODE_73595_length_214_cov_2.502793_g65654_i0reverse_frame_3 - 0.076 12.6 2.1 0.082 12.5 2.1 1.1 1 0 0 1 1 1 0 O-Antigen ligase Prominin PF05478.11 NODE_73595_length_214_cov_2.502793_g65654_i0reverse_frame_3 - 0.62 8.0 2.0 0.68 7.8 2.0 1.1 1 0 0 1 1 1 0 Prominin Syndecan PF01034.20 NODE_73595_length_214_cov_2.502793_g65654_i0reverse_frame_3 - 5 7.1 5.1 1.1 9.2 0.2 2.0 2 0 0 2 2 2 0 Syndecan domain Epiglycanin_C PF14654.6 NODE_73594_length_214_cov_2.519553_g65653_i0forward_frame_3 - 0.029 14.4 0.0 0.032 14.3 0.0 1.1 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region RAMP4 PF06624.12 NODE_73592_length_214_cov_2.547486_g65651_i0forward_frame_2 - 6.1 7.0 5.7 2.3 8.4 0.8 2.0 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 DUF1547 PF07577.11 NODE_73587_length_214_cov_2.703911_g65646_i0reverse_frame_2 - 0.062 13.7 0.1 0.079 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1547) CBP_BcsN PF17038.5 NODE_73586_length_214_cov_2.726257_g65645_i0reverse_frame_2 - 0.0016 17.8 0.1 0.0017 17.8 0.1 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsN MFS_1 PF07690.16 NODE_73584_length_214_cov_2.770950_g65643_i0forward_frame_2 - 6.6e-09 35.1 2.0 7.5e-09 35.0 2.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily CBM_19 PF03427.13 NODE_73582_length_214_cov_2.916201_g65641_i0reverse_frame_2 - 0.023 14.7 0.5 4.4 7.4 0.0 2.1 2 0 0 2 2 2 0 Carbohydrate binding domain (family 19) ATP_transf PF09830.9 NODE_73580_length_214_cov_2.977654_g65639_i0reverse_frame_3 - 0.17 12.0 0.2 0.23 11.6 0.2 1.5 1 1 0 1 1 1 0 ATP adenylyltransferase DUF4316 PF14195.6 NODE_73578_length_214_cov_3.111732_g65637_i0reverse_frame_3 - 0.14 12.0 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4316) NDUF_B7 PF05676.13 NODE_73578_length_214_cov_3.111732_g65637_i0reverse_frame_2 - 0.059 13.1 1.1 0.062 13.0 0.2 1.5 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Sulfotransfer_1 PF00685.27 NODE_73578_length_214_cov_3.111732_g65637_i0forward_frame_3 - 0.00021 20.9 0.2 0.00022 20.8 0.2 1.0 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 NODE_73578_length_214_cov_3.111732_g65637_i0forward_frame_3 - 0.014 15.8 0.0 0.014 15.8 0.0 1.0 1 0 0 1 1 1 0 Sulfotransferase family Ldh_1_N PF00056.23 NODE_73578_length_214_cov_3.111732_g65637_i0forward_frame_3 - 0.09 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain PM0188 PF11477.8 NODE_73576_length_214_cov_3.189944_g65635_i0forward_frame_3 - 0.071 12.3 0.0 0.071 12.3 0.0 1.0 1 0 0 1 1 1 0 Sialyltransferase PMO188 NDUF_B4 PF07225.12 NODE_73576_length_214_cov_3.189944_g65635_i0forward_frame_2 - 0.038 13.9 0.0 0.045 13.7 0.0 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) Kinesin PF00225.23 NODE_73571_length_214_cov_3.335196_g65630_i0forward_frame_3 - 4.5e-06 25.8 0.0 4.7e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_73571_length_214_cov_3.335196_g65630_i0forward_frame_3 - 0.0026 17.7 0.1 0.0046 16.9 0.0 1.3 1 1 0 1 1 1 1 Microtubule binding Kinesin PF00225.23 NODE_73571_length_214_cov_3.335196_g65630_i0forward_frame_2 - 0.0011 18.0 0.2 0.0013 17.7 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_73571_length_214_cov_3.335196_g65630_i0forward_frame_2 - 0.016 15.1 0.2 0.019 14.9 0.2 1.1 1 0 0 1 1 1 0 Microtubule binding Ion_trans PF00520.31 NODE_73569_length_214_cov_3.553073_g65628_i0forward_frame_3 - 0.013 14.7 0.1 0.019 14.2 0.1 1.3 1 0 0 1 1 1 0 Ion transport protein DUF2718 PF10918.8 NODE_73566_length_214_cov_3.726257_g65625_i0reverse_frame_3 - 0.11 13.0 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2718) Zn_Tnp_IS91 PF14319.6 NODE_73563_length_214_cov_4.636872_g65622_i0reverse_frame_2 - 0.01 15.8 0.6 0.012 15.6 0.6 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain FlpD PF02662.16 NODE_73563_length_214_cov_4.636872_g65622_i0reverse_frame_2 - 0.026 14.5 0.5 0.03 14.3 0.5 1.1 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit Ntox16 PF15523.6 NODE_73563_length_214_cov_4.636872_g65622_i0reverse_frame_2 - 0.041 14.1 5.6 0.048 13.9 5.6 1.1 1 0 0 1 1 1 0 Novel toxin 16 REV PF00424.18 NODE_73559_length_214_cov_15.497207_g65618_i0reverse_frame_3 - 0.015 15.3 0.1 0.017 15.1 0.1 1.1 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) Metallopep PF12044.8 NODE_73559_length_214_cov_15.497207_g65618_i0forward_frame_2 - 0.0021 16.7 0.7 0.0024 16.6 0.7 1.1 1 0 0 1 1 1 1 Putative peptidase family EAP30 PF04157.16 NODE_73556_length_214_cov_22.586592_g65615_i0forward_frame_3 - 0.18 11.1 0.0 0.18 11.1 0.0 1.0 1 0 0 1 1 1 0 EAP30/Vps36 family Papilloma_E5A PF05776.12 NODE_73555_length_214_cov_26.022346_g65614_i0forward_frame_2 - 0.23 11.8 11.8 0.27 11.6 11.8 1.2 1 0 0 1 1 1 0 Papillomavirus E5A protein DUF2070 PF09843.9 NODE_73555_length_214_cov_26.022346_g65614_i0forward_frame_2 - 8.6 4.5 11.3 8.7 4.5 11.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) GMAP PF06540.11 NODE_73554_length_214_cov_30.642458_g65613_i0reverse_frame_3 - 0.17 11.9 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Galanin message associated peptide (GMAP) Baculo_p48 PF04878.13 NODE_73552_length_214_cov_33.050279_g65611_i0reverse_frame_3 - 0.02 13.8 0.4 0.024 13.6 0.4 1.1 1 0 0 1 1 1 0 Baculovirus P48 protein DUF932 PF06067.11 NODE_73549_length_214_cov_36.430168_g65608_i0forward_frame_3 - 0.088 12.6 0.5 0.088 12.6 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF932) Pfk_N PF18468.1 NODE_73549_length_214_cov_36.430168_g65608_i0forward_frame_2 - 0.15 12.5 1.1 0.3 11.5 0.2 1.7 1 1 1 2 2 2 0 Phosphofructokinase N-terminal domain yeast VWC PF00093.18 NODE_73548_length_214_cov_37.748603_g65607_i0reverse_frame_3 - 0.3 11.4 10.6 3.9 7.9 10.6 2.0 1 1 0 1 1 1 0 von Willebrand factor type C domain TILa PF12714.7 NODE_73542_length_214_cov_45.949721_g65601_i0forward_frame_3 - 0.004 17.1 0.3 0.004 17.1 0.3 1.7 2 0 0 2 2 2 1 TILa domain Antistasin PF02822.14 NODE_73541_length_214_cov_46.039106_g65600_i0reverse_frame_2 - 0.038 14.6 1.1 0.043 14.5 0.1 1.6 2 0 0 2 2 2 0 Antistasin family DUF4481 PF14800.6 NODE_73540_length_214_cov_46.324022_g65599_i0forward_frame_3 - 0.95 8.9 5.7 1 8.8 5.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) DUF5531 PF17671.1 NODE_73539_length_214_cov_47.569832_g65598_i0reverse_frame_3 - 0.061 13.2 0.6 0.066 13.1 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5531) FA_hydroxylase PF04116.13 NODE_73537_length_214_cov_50.575419_g65596_i0reverse_frame_3 - 0.0091 16.3 0.2 0.0093 16.3 0.2 1.1 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily Cys_rich_VLP PF14194.6 NODE_73536_length_214_cov_50.648045_g65595_i0reverse_frame_2 - 0.045 13.9 0.0 0.093 12.9 0.0 1.5 2 0 0 2 2 2 0 Cysteine-rich VLP MAS20 PF02064.15 NODE_73535_length_214_cov_51.955307_g65594_i0reverse_frame_3 - 4.2 7.5 15.4 0.77 9.9 11.5 1.7 1 1 1 2 2 2 0 MAS20 protein import receptor DUF1290 PF06947.12 NODE_73535_length_214_cov_51.955307_g65594_i0forward_frame_3 - 0.11 12.6 4.0 0.14 12.3 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1290) Dpy19 PF10034.9 NODE_73534_length_214_cov_51.988827_g65593_i0forward_frame_2 - 0.087 11.0 1.3 0.081 11.1 1.3 1.0 1 0 0 1 1 1 0 Q-cell neuroblast polarisation Dimer_Tnp_hAT PF05699.14 NODE_73532_length_214_cov_57.513966_g65591_i0reverse_frame_3 - 0.036 13.9 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region Rnf-Nqr PF02508.14 NODE_73525_length_214_cov_66.039106_g65584_i0reverse_frame_3 - 0.046 13.7 0.0 0.046 13.7 0.0 1.1 1 0 0 1 1 1 0 Rnf-Nqr subunit, membrane protein RNA_polI_A34 PF08208.11 NODE_73525_length_214_cov_66.039106_g65584_i0reverse_frame_2 - 0.034 14.2 12.1 0.036 14.2 12.1 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Coilin_N PF15862.5 NODE_73525_length_214_cov_66.039106_g65584_i0reverse_frame_2 - 1.2 9.0 13.5 1.3 8.9 13.5 1.1 1 0 0 1 1 1 0 Coilin N-terminus Peptidase_S49_N PF08496.10 NODE_73525_length_214_cov_66.039106_g65584_i0reverse_frame_2 - 3.3 7.8 10.0 4.1 7.5 10.0 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal DUF3488 PF11992.8 NODE_73525_length_214_cov_66.039106_g65584_i0forward_frame_2 - 0.34 9.8 3.2 0.35 9.8 3.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) Sigma70_r4 PF04545.16 NODE_73523_length_214_cov_66.631285_g65582_i0reverse_frame_3 - 0.05 13.1 0.2 0.073 12.6 0.2 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 UPF0183 PF03676.14 NODE_73522_length_214_cov_66.692737_g65581_i0reverse_frame_3 - 0.14 11.4 0.9 0.15 11.3 0.9 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0183) Laminin_EGF PF00053.24 NODE_73521_length_214_cov_71.910615_g65580_i0forward_frame_2 - 0.98 9.6 10.1 5.3 7.3 0.4 3.0 1 1 1 2 2 2 0 Laminin EGF domain Pox_TAA1 PF03295.14 NODE_73520_length_214_cov_72.754190_g65579_i0forward_frame_3 - 0.13 12.2 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 Poxvirus trans-activator protein A1 C-terminal WD40 PF00400.32 NODE_73520_length_214_cov_72.754190_g65579_i0forward_frame_2 - 0.019 15.8 0.3 0.037 14.9 0.1 1.6 1 1 0 1 1 1 0 WD domain, G-beta repeat PALB2_WD40 PF16756.5 NODE_73520_length_214_cov_72.754190_g65579_i0forward_frame_2 - 0.044 12.7 0.0 0.052 12.5 0.0 1.0 1 0 0 1 1 1 0 Partner and localizer of BRCA2 WD40 domain Antibiotic_NAT PF02522.14 NODE_73519_length_214_cov_73.776536_g65578_i0reverse_frame_3 - 0.088 12.6 0.1 0.1 12.4 0.1 1.0 1 0 0 1 1 1 0 Aminoglycoside 3-N-acetyltransferase E7R PF17467.2 NODE_73517_length_214_cov_86.234637_g65576_i0reverse_frame_2 - 0.049 13.8 0.1 0.066 13.4 0.1 1.2 1 0 0 1 1 1 0 Viral Protein E7 SID-1_RNA_chan PF13965.6 NODE_73515_length_214_cov_91.726257_g65574_i0reverse_frame_2 - 0.71 8.2 4.4 0.84 8.0 4.4 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 ETRAMP PF09716.10 NODE_73513_length_214_cov_113.307263_g65572_i0forward_frame_3 - 0.051 13.6 1.5 0.067 13.3 1.5 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) XRCC4 PF06632.12 NODE_73512_length_214_cov_113.391061_g65571_i0forward_frame_2 - 0.26 10.1 0.0 0.3 9.9 0.0 1.0 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 MerR PF00376.23 NODE_73507_length_214_cov_142.597765_g65566_i0reverse_frame_2 - 0.024 14.4 0.0 0.11 12.2 0.0 1.9 2 0 0 2 2 2 0 MerR family regulatory protein RNA_pol_Rpb8 PF03870.15 NODE_73506_length_214_cov_171.189944_g65565_i0reverse_frame_2 - 0.00094 19.4 0.3 0.001 19.3 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb8 EBV-NA1 PF02905.14 NODE_73501_length_214_cov_253.899441_g65560_i0reverse_frame_2 - 0.11 12.3 0.1 0.23 11.3 0.1 1.5 1 1 1 2 2 2 0 Epstein Barr virus nuclear antigen-1, DNA-binding domain rRNA_processing PF08524.11 NODE_73491_length_215_cov_0.877778_g65550_i0reverse_frame_3 - 0.1 12.7 0.1 0.1 12.6 0.1 1.1 1 0 0 1 1 1 0 rRNA processing DUF3915 PF13054.6 NODE_73490_length_215_cov_0.883333_g65549_i0forward_frame_3 - 0.015 15.3 1.4 0.017 15.1 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_73490_length_215_cov_0.883333_g65549_i0forward_frame_3 - 0.75 8.0 4.0 0.81 7.9 4.0 1.0 1 0 0 1 1 1 0 Atrophin-1 family Myticin-prepro PF10690.9 NODE_73490_length_215_cov_0.883333_g65549_i0forward_frame_2 - 0.059 13.6 0.5 0.091 13.0 0.3 1.4 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel Glyc_hyd_38C_2 PF18230.1 NODE_73490_length_215_cov_0.883333_g65549_i0forward_frame_2 - 0.07 13.2 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal sub-domain EpmC PF04315.12 NODE_73489_length_215_cov_0.883333_g65548_i0forward_frame_3 - 0.2 11.4 0.0 0.22 11.2 0.0 1.1 1 0 0 1 1 1 0 Elongation factor P hydroxylase SAE2 PF08573.10 NODE_73487_length_215_cov_0.883333_g65546_i0reverse_frame_2 - 0.096 13.8 5.3 0.12 13.5 5.3 1.1 1 0 0 1 1 1 0 DNA repair protein endonuclease SAE2/CtIP C-terminus DUF782 PF05614.11 NODE_73487_length_215_cov_0.883333_g65546_i0forward_frame_3 - 0.14 12.6 1.5 0.17 12.3 1.5 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) DUF640 PF04852.12 NODE_73486_length_215_cov_0.883333_g65545_i0forward_frame_3 - 0.036 14.2 0.0 0.037 14.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF640) RAG2_PHD PF13341.6 NODE_73484_length_215_cov_0.883333_g65543_i0forward_frame_2 - 0.049 13.7 0.0 0.057 13.5 0.0 1.2 1 0 0 1 1 1 0 RAG2 PHD domain Spt46 PF17734.1 NODE_73483_length_215_cov_0.888889_g65542_i0forward_frame_3 - 0.037 13.8 0.2 0.038 13.8 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 Glyco_hydro_3_C PF01915.22 NODE_73482_length_215_cov_0.888889_g65541_i0forward_frame_3 - 2.2e-08 34.3 0.0 2.2e-08 34.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain HEV_ORF1 PF02444.16 NODE_73481_length_215_cov_0.888889_g65540_i0forward_frame_2 - 9.5 6.8 7.5 12 6.5 7.5 1.2 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) PhaC_N PF07167.13 NODE_73480_length_215_cov_0.888889_g65539_i0reverse_frame_3 - 0.23 11.1 1.0 0.29 10.8 1.0 1.1 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks380.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks380.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks380.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks380.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- UL11 PF11094.8 NODE_73474_length_215_cov_0.888889_g65533_i0forward_frame_3 - 0.18 11.7 0.8 0.34 10.8 0.8 1.5 1 0 0 1 1 1 0 Membrane-associated tegument protein DUF5527 PF17665.1 NODE_73465_length_215_cov_1.011111_g65524_i0forward_frame_2 - 0.035 13.6 0.8 0.039 13.5 0.8 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5527) Chitin_synth_2 PF03142.15 NODE_73464_length_215_cov_1.016667_g65523_i0reverse_frame_3 - 0.2 10.3 0.4 0.21 10.2 0.4 1.0 1 0 0 1 1 1 0 Chitin synthase N36 PF11438.8 NODE_73462_length_215_cov_1.027778_g65521_i0forward_frame_3 - 0.12 12.2 0.1 0.59 10.0 0.0 1.9 1 1 1 2 2 2 0 36-mer N-terminal peptide of the N protein (N36) Arm-DNA-bind_4 PF14657.6 NODE_73458_length_215_cov_1.055556_g65517_i0forward_frame_2 - 0.22 11.3 2.0 0.34 10.7 2.0 1.3 1 0 0 1 1 1 0 Arm DNA-binding domain Pkinase PF00069.25 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 1.6e-16 60.5 0.9 1.7e-16 60.4 0.9 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 4.1e-10 39.4 0.1 4.3e-10 39.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 1.2e-05 24.8 0.0 1.2e-05 24.8 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.0023 16.8 0.2 0.0023 16.8 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.0087 15.2 0.1 0.0096 15.0 0.1 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 Pox_ser-thr_kin PF05445.11 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.018 14.0 0.2 0.018 14.0 0.2 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Haspin_kinase PF12330.8 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.028 13.4 0.2 0.03 13.3 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.028 14.3 0.1 0.028 14.3 0.1 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF2642 PF10842.8 NODE_73456_length_215_cov_1.061111_g65515_i0reverse_frame_2 - 0.18 11.7 0.8 3.4 7.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2642) TSP_NTD PF17804.1 NODE_73456_length_215_cov_1.061111_g65515_i0forward_frame_2 - 0.11 12.7 0.3 0.12 12.6 0.3 1.1 1 0 0 1 1 1 0 Tail specific protease N-terminal domain Kinesin PF00225.23 NODE_73455_length_215_cov_1.061111_g65514_i0reverse_frame_2 - 9.9e-17 60.9 0.6 1e-16 60.8 0.6 1.0 1 0 0 1 1 1 1 Kinesin motor domain Sugar_tr PF00083.24 NODE_73451_length_215_cov_1.100000_g65510_i0reverse_frame_3 - 2.1e-15 56.6 0.3 2.2e-15 56.5 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter WBP-1 PF11669.8 NODE_73449_length_215_cov_1.105556_g65508_i0forward_frame_3 - 1.8 9.3 5.7 2.1 9.0 5.7 1.3 1 1 0 1 1 1 0 WW domain-binding protein 1 ApeC PF16977.5 NODE_73447_length_215_cov_1.105556_g65506_i0reverse_frame_2 - 0.077 12.9 0.0 0.086 12.8 0.0 1.1 1 0 0 1 1 1 0 C-terminal domain of apextrin DUF1411 PF07199.11 NODE_73447_length_215_cov_1.105556_g65506_i0reverse_frame_2 - 0.21 11.2 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1411) LisH_TPL PF17814.1 NODE_73446_length_215_cov_1.105556_g65505_i0reverse_frame_2 - 0.011 15.4 0.1 0.017 14.8 0.1 1.4 1 0 0 1 1 1 0 LisH-like dimerisation domain DUF3931 PF13082.6 NODE_73442_length_215_cov_1.127778_g65501_i0forward_frame_2 - 0.034 14.3 0.3 0.59 10.3 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3931) RestrictionMunI PF11407.8 NODE_73442_length_215_cov_1.127778_g65501_i0forward_frame_2 - 0.16 11.7 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Type II restriction enzyme MunI Uds1 PF15456.6 NODE_73441_length_215_cov_1.133333_g65500_i0reverse_frame_2 - 0.2 11.8 3.6 0.22 11.7 3.6 1.1 1 0 0 1 1 1 0 Up-regulated During Septation DUF4051 PF13260.6 NODE_73439_length_215_cov_1.177778_g65498_i0reverse_frame_2 - 0.098 12.4 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) AIRS PF00586.24 NODE_73438_length_215_cov_1.188889_g65497_i0reverse_frame_3 - 0.029 15.0 0.3 0.04 14.6 0.3 1.2 1 0 0 1 1 1 0 AIR synthase related protein, N-terminal domain DUF725 PF05267.12 NODE_73435_length_215_cov_1.211111_g65494_i0forward_frame_2 - 0.065 13.2 1.7 0.078 13.0 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF725) Lamprin PF06403.11 NODE_73433_length_215_cov_1.222222_g65492_i0reverse_frame_3 - 0.085 12.8 14.4 0.22 11.5 10.0 2.0 1 1 1 2 2 2 0 Lamprin Lamprin PF06403.11 NODE_73433_length_215_cov_1.222222_g65492_i0reverse_frame_2 - 0.45 10.5 8.1 0.73 9.8 4.7 2.0 1 1 1 2 2 2 0 Lamprin PLDc_2 PF13091.6 NODE_73429_length_215_cov_1.250000_g65488_i0reverse_frame_3 - 0.0023 17.8 0.1 0.0039 17.1 0.1 1.4 1 0 0 1 1 1 1 PLD-like domain DUF4541 PF15074.6 NODE_73428_length_215_cov_1.266667_g65487_i0reverse_frame_3 - 0.0079 16.8 0.0 0.0079 16.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4541) DUF3023 PF11224.8 NODE_73428_length_215_cov_1.266667_g65487_i0reverse_frame_2 - 0.077 12.8 0.1 0.097 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3023) AAA_2 PF07724.14 NODE_73427_length_215_cov_1.288889_g65486_i0reverse_frame_3 - 0.14 12.3 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) UPF0542 PF15086.6 NODE_73427_length_215_cov_1.288889_g65486_i0forward_frame_2 - 0.06 13.3 1.5 0.073 13.0 1.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 TMEM51 PF15345.6 NODE_73427_length_215_cov_1.288889_g65486_i0forward_frame_2 - 0.16 11.8 0.1 0.17 11.7 0.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 ketoacyl-synt PF00109.26 NODE_73426_length_215_cov_1.288889_g65485_i0reverse_frame_3 - 0.00016 21.4 0.2 0.00088 18.9 0.1 1.8 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 NODE_73426_length_215_cov_1.288889_g65485_i0reverse_frame_3 - 0.00021 21.3 0.0 0.00026 21.0 0.0 1.1 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain HHV-1_VABD PF16852.5 NODE_73425_length_215_cov_1.294444_g65484_i0reverse_frame_3 - 0.02 14.9 1.3 0.024 14.6 0.4 1.5 2 0 0 2 2 2 0 Herpes viral adaptor-to-host cellular mRNA binding domain Hydrophobin PF01185.18 NODE_73419_length_215_cov_1.322222_g65478_i0reverse_frame_3 - 0.089 13.4 0.3 0.13 13.0 0.3 1.3 1 0 0 1 1 1 0 Fungal hydrophobin Molybdop_Fe4S4 PF04879.16 NODE_73414_length_215_cov_1.333333_g65473_i0reverse_frame_2 - 0.061 13.3 1.3 0.061 13.3 1.3 1.5 2 0 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain Lustrin_cystein PF14625.6 NODE_73414_length_215_cov_1.333333_g65473_i0reverse_frame_2 - 0.22 11.9 7.3 0.5 10.8 5.2 2.7 1 1 1 2 2 2 0 Lustrin, cysteine-rich repeated domain EXOSC1 PF10447.9 NODE_73411_length_215_cov_1.344444_g65470_i0forward_frame_3 - 0.11 13.1 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 Exosome component EXOSC1/CSL4 SAM_2 PF07647.17 NODE_73398_length_215_cov_1.438889_g65457_i0reverse_frame_2 - 7.5e-05 22.8 0.0 9.6e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_1 PF00536.30 NODE_73398_length_215_cov_1.438889_g65457_i0reverse_frame_2 - 0.0023 18.3 0.0 0.021 15.2 0.0 2.0 1 1 1 2 2 2 1 SAM domain (Sterile alpha motif) RNA_pol_A_CTD PF03118.15 NODE_73398_length_215_cov_1.438889_g65457_i0reverse_frame_2 - 0.0081 15.9 0.0 0.011 15.4 0.0 1.3 1 1 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain HHH_5 PF14520.6 NODE_73398_length_215_cov_1.438889_g65457_i0reverse_frame_2 - 0.0094 16.5 0.1 0.036 14.7 0.0 1.8 2 0 0 2 2 2 1 Helix-hairpin-helix domain Nodulin-like PF06813.13 NODE_73397_length_215_cov_1.438889_g65456_i0forward_frame_3 - 0.071 12.6 0.3 0.082 12.4 0.3 1.1 1 0 0 1 1 1 0 Nodulin-like Herpes_LMP1 PF05297.11 NODE_73397_length_215_cov_1.438889_g65456_i0forward_frame_2 - 2.9 7.0 6.6 3.1 6.9 6.6 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) TFIIS_C PF01096.18 NODE_73396_length_215_cov_1.444444_g65455_i0reverse_frame_3 - 0.072 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Transcription factor S-II (TFIIS) Sprouty PF05210.13 NODE_73395_length_215_cov_1.450000_g65454_i0reverse_frame_3 - 0.1 13.0 0.2 0.31 11.4 0.2 1.8 1 1 0 1 1 1 0 Sprouty protein (Spry) DUF523 PF04463.12 NODE_73394_length_215_cov_1.455556_g65453_i0reverse_frame_3 - 0.14 12.2 0.4 0.15 12.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF523) CATSPERD PF15020.6 NODE_73393_length_215_cov_1.461111_g65452_i0reverse_frame_3 - 0.25 9.6 5.0 0.26 9.5 5.0 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit delta Mob_synth_C PF06463.13 NODE_73393_length_215_cov_1.461111_g65452_i0forward_frame_3 - 0.029 14.3 0.4 0.033 14.1 0.4 1.3 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C Fer4 PF00037.27 NODE_73392_length_215_cov_1.461111_g65451_i0reverse_frame_2 - 0.046 13.6 0.2 0.073 12.9 0.2 1.4 1 0 0 1 1 1 0 4Fe-4S binding domain HAUS4 PF14735.6 NODE_73390_length_215_cov_1.477778_g65449_i0forward_frame_3 - 0.046 13.4 0.8 0.051 13.3 0.3 1.3 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 4 ECR1_N PF14382.6 NODE_73390_length_215_cov_1.477778_g65449_i0forward_frame_2 - 0.1 12.4 0.5 0.19 11.6 0.5 1.6 1 1 0 1 1 1 0 Exosome complex exonuclease RRP4 N-terminal region Mob_synth_C PF06463.13 NODE_73389_length_215_cov_1.483333_g65448_i0reverse_frame_3 - 0.03 14.2 0.5 0.035 14.0 0.5 1.3 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C CATSPERD PF15020.6 NODE_73389_length_215_cov_1.483333_g65448_i0forward_frame_3 - 0.25 9.6 5.0 0.26 9.5 5.0 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit delta FAINT PF04385.15 NODE_73388_length_215_cov_1.488889_g65447_i0reverse_frame_2 - 0.11 12.6 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function, DUF529 TarH PF02203.15 NODE_73387_length_215_cov_1.500000_g65446_i0reverse_frame_2 - 1.9e-05 24.7 0.0 2.2e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 Tar ligand binding domain homologue stn_TNFRSF12A PF12191.8 NODE_73387_length_215_cov_1.500000_g65446_i0reverse_frame_2 - 0.062 13.5 0.0 0.064 13.5 0.0 1.1 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain eIF3_p135 PF12807.7 NODE_73386_length_215_cov_1.500000_g65445_i0reverse_frame_3 - 0.046 13.8 0.2 0.048 13.7 0.2 1.1 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit 135 EBV-NA3 PF05009.12 NODE_73386_length_215_cov_1.500000_g65445_i0reverse_frame_3 - 0.18 11.3 0.1 0.18 11.3 0.1 1.0 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) Peptidase_A22B PF04258.13 NODE_73383_length_215_cov_1.511111_g65442_i0forward_frame_3 - 0.0073 15.9 0.1 0.0078 15.8 0.1 1.0 1 0 0 1 1 1 1 Signal peptide peptidase Sulf_transp PF04143.14 NODE_73377_length_215_cov_1.555556_g65436_i0reverse_frame_3 - 0.0065 16.1 0.1 0.0071 16.0 0.1 1.0 1 0 0 1 1 1 1 Sulphur transport DUF2570 PF10828.8 NODE_73376_length_215_cov_1.555556_g65435_i0reverse_frame_3 - 0.012 15.4 0.8 0.019 14.8 0.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) 7tm_3 PF00003.22 NODE_73374_length_215_cov_1.555556_g65433_i0reverse_frame_3 - 0.1 12.3 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 7 transmembrane sweet-taste receptor of 3 GCPR DDDD PF10161.9 NODE_73374_length_215_cov_1.555556_g65433_i0reverse_frame_3 - 0.15 11.8 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Putative mitochondrial precursor protein Peptidase_M1_N PF17900.1 NODE_73373_length_215_cov_1.572222_g65432_i0forward_frame_2 - 7.5e-14 52.3 0.0 8.2e-14 52.2 0.0 1.0 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Lamprin PF06403.11 NODE_73372_length_215_cov_1.588889_g65431_i0reverse_frame_3 - 0.0005 20.0 4.7 0.00054 19.9 4.7 1.3 1 0 0 1 1 1 1 Lamprin Sporozoite_P67 PF05642.11 NODE_73372_length_215_cov_1.588889_g65431_i0reverse_frame_3 - 0.3 9.1 3.5 0.28 9.2 3.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Lamprin PF06403.11 NODE_73372_length_215_cov_1.588889_g65431_i0reverse_frame_2 - 0.00015 21.7 2.8 0.00016 21.6 2.8 1.0 1 0 0 1 1 1 1 Lamprin MmgE_PrpD PF03972.14 NODE_73371_length_215_cov_1.611111_g65430_i0forward_frame_2 - 5.5e-17 61.4 0.5 5.8e-17 61.4 0.5 1.0 1 0 0 1 1 1 1 MmgE/PrpD family RhoGAP-FF1 PF16512.5 NODE_73367_length_215_cov_1.622222_g65426_i0reverse_frame_2 - 0.014 16.1 0.1 0.016 15.9 0.1 1.1 1 0 0 1 1 1 0 p190-A and -B Rho GAPs FF domain ERGIC_N PF13850.6 NODE_73367_length_215_cov_1.622222_g65426_i0forward_frame_2 - 0.0038 17.5 0.3 0.0044 17.3 0.3 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF5326 PF17260.2 NODE_73367_length_215_cov_1.622222_g65426_i0forward_frame_2 - 0.011 15.9 0.6 0.012 15.7 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5326) FtsK_4TM PF13491.6 NODE_73367_length_215_cov_1.622222_g65426_i0forward_frame_2 - 0.081 12.6 0.2 0.087 12.5 0.2 1.1 1 0 0 1 1 1 0 4TM region of DNA translocase FtsK/SpoIIIE Polysacc_synt PF01943.17 NODE_73365_length_215_cov_1.638889_g65424_i0reverse_frame_2 - 0.042 13.2 0.0 0.043 13.2 0.0 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF1178 PF06676.11 NODE_73365_length_215_cov_1.638889_g65424_i0forward_frame_2 - 0.029 14.7 0.5 0.033 14.6 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) Replicase PF03090.17 NODE_73365_length_215_cov_1.638889_g65424_i0forward_frame_2 - 0.077 12.8 0.0 0.078 12.8 0.0 1.1 1 0 0 1 1 1 0 Replicase family Pico_P2A PF00947.19 NODE_73364_length_215_cov_1.638889_g65423_i0forward_frame_2 - 0.034 14.2 2.0 0.035 14.1 2.0 1.2 1 0 0 1 1 1 0 Picornavirus core protein 2A HEV_ORF1 PF02444.16 NODE_73360_length_215_cov_1.666667_g65419_i0forward_frame_3 - 0.23 12.0 4.7 0.29 11.7 4.7 1.1 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) PG_binding_3 PF09374.10 NODE_73354_length_215_cov_1.705556_g65413_i0reverse_frame_3 - 0.14 12.4 0.0 1.3 9.3 0.0 2.2 2 1 0 2 2 2 0 Predicted Peptidoglycan domain LZ_Tnp_IS481 PF13011.6 NODE_73354_length_215_cov_1.705556_g65413_i0reverse_frame_2 - 1 9.9 3.4 13 6.4 0.6 2.8 1 1 1 2 2 2 0 leucine-zipper of insertion element IS481 EF-hand_1 PF00036.32 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 4.5e-09 35.2 0.5 1.7e-08 33.4 0.2 2.0 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 4.4e-08 32.4 0.1 4e-07 29.4 0.1 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 3e-07 30.8 0.6 3.8e-07 30.5 0.6 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 1.3e-06 27.6 0.3 3.1e-06 26.4 0.3 1.6 1 1 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.002 17.9 0.3 0.0034 17.2 0.3 1.7 1 1 0 1 1 1 1 EF-hand domain pair RecG_N PF17190.4 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.015 16.0 2.9 0.025 15.3 2.9 1.4 1 1 0 1 1 1 0 RecG N-terminal helical domain FadA PF09403.10 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.029 14.8 5.2 0.033 14.7 5.2 1.1 1 0 0 1 1 1 0 Adhesion protein FadA Caleosin PF05042.13 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.082 12.8 0.2 0.13 12.2 0.2 1.5 1 1 0 1 1 1 0 Caleosin related protein DUF365 PF04033.12 NODE_73353_length_215_cov_1.716667_g65412_i0forward_frame_2 - 0.094 13.0 1.9 0.13 12.5 0.7 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF365) Tetraspanin PF00335.20 NODE_73350_length_215_cov_1.738889_g65409_i0reverse_frame_2 - 0.13 12.0 2.2 0.14 11.8 2.2 1.0 1 0 0 1 1 1 0 Tetraspanin family TT_ORF1 PF02956.14 NODE_73350_length_215_cov_1.738889_g65409_i0forward_frame_3 - 4.5 5.8 12.0 4.8 5.7 12.0 1.0 1 0 0 1 1 1 0 TT viral orf 1 UL11 PF11094.8 NODE_73348_length_215_cov_1.761111_g65407_i0reverse_frame_2 - 0.045 13.6 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 Membrane-associated tegument protein Pentapeptide_3 PF13576.6 NODE_73345_length_215_cov_1.766667_g65404_i0reverse_frame_3 - 0.0056 16.8 0.2 0.0072 16.5 0.2 1.1 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) DUSP PF06337.12 NODE_73343_length_215_cov_1.766667_g65402_i0forward_frame_2 - 2.7e-06 27.9 0.2 3.2e-06 27.7 0.2 1.2 1 0 0 1 1 1 1 DUSP domain Npa1 PF11707.8 NODE_73343_length_215_cov_1.766667_g65402_i0forward_frame_2 - 0.032 13.6 0.0 0.038 13.4 0.0 1.0 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal ANAPC5 PF12862.7 NODE_73341_length_215_cov_1.772222_g65400_i0forward_frame_2 - 0.074 13.1 0.0 0.079 13.0 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 5 Hid1 PF12722.7 NODE_73340_length_215_cov_1.772222_g65399_i0forward_frame_3 - 0.76 7.8 4.5 0.71 7.9 4.5 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Mito_carr PF00153.27 NODE_73339_length_215_cov_1.777778_g65398_i0forward_frame_2 - 0.0012 18.8 0.0 0.0013 18.6 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein PHD_3 PF13922.6 NODE_73338_length_215_cov_1.783333_g65397_i0reverse_frame_2 - 0.017 15.5 1.1 0.017 15.5 1.1 1.4 2 0 0 2 2 2 0 PHD domain of transcriptional enhancer, Asx Neurensin PF14927.6 NODE_73338_length_215_cov_1.783333_g65397_i0reverse_frame_2 - 0.074 12.8 0.5 0.093 12.4 0.5 1.1 1 0 0 1 1 1 0 Neurensin Codanin-1_C PF15296.6 NODE_73338_length_215_cov_1.783333_g65397_i0forward_frame_2 - 0.045 13.8 0.0 0.059 13.5 0.0 1.2 1 0 0 1 1 1 0 Codanin-1 C-terminus Baculo_Y142 PF04913.12 NODE_73337_length_215_cov_1.827778_g65396_i0reverse_frame_3 - 0.0014 17.4 0.1 0.0017 17.2 0.1 1.0 1 0 0 1 1 1 1 Baculovirus Y142 protein Lys-AminoMut_A PF09043.11 NODE_73337_length_215_cov_1.827778_g65396_i0reverse_frame_3 - 0.13 10.7 0.4 0.14 10.6 0.4 1.1 1 0 0 1 1 1 0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Neurokinin_B PF03823.14 NODE_73337_length_215_cov_1.827778_g65396_i0forward_frame_3 - 0.95 9.6 3.4 0.68 10.0 2.1 1.4 1 1 0 1 1 1 0 Neurokinin B 60KD_IMP PF02096.20 NODE_73336_length_215_cov_1.838889_g65395_i0forward_frame_3 - 0.028 14.3 0.0 0.029 14.3 0.0 1.1 1 0 0 1 1 1 0 60Kd inner membrane protein Chorismate_synt PF01264.21 NODE_73332_length_215_cov_1.855556_g65391_i0forward_frame_2 - 6.1e-21 74.5 0.0 6.7e-21 74.3 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase MIF PF01187.18 NODE_73332_length_215_cov_1.855556_g65391_i0forward_frame_2 - 0.087 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Macrophage migration inhibitory factor (MIF) p450 PF00067.22 NODE_73331_length_215_cov_1.888889_g65390_i0reverse_frame_3 - 7.3e-05 21.7 0.0 7.4e-05 21.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 RVT_2 PF07727.14 NODE_73315_length_215_cov_2.077778_g65374_i0reverse_frame_2 - 7.3e-10 38.9 0.0 7.4e-10 38.9 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) PIP5K PF01504.18 NODE_73314_length_215_cov_2.077778_g65373_i0reverse_frame_2 - 0.011 14.9 0.4 0.013 14.8 0.4 1.0 1 0 0 1 1 1 0 Phosphatidylinositol-4-phosphate 5-Kinase amfpi-1 PF12190.8 NODE_73314_length_215_cov_2.077778_g65373_i0reverse_frame_2 - 0.044 14.4 0.8 0.05 14.2 0.8 1.0 1 0 0 1 1 1 0 Fungal protease inhibitor PGP_phosphatase PF09419.10 NODE_73311_length_215_cov_2.161111_g65370_i0forward_frame_2 - 0.092 12.3 0.1 0.098 12.3 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase DUF3747 PF12565.8 NODE_73305_length_215_cov_2.216667_g65364_i0forward_frame_2 - 0.052 12.9 0.0 0.063 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3747) Cnd1 PF12717.7 NODE_73304_length_215_cov_2.233333_g65363_i0forward_frame_3 - 0.024 14.7 0.5 0.025 14.6 0.5 1.0 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 APC1_C PF18122.1 NODE_73301_length_215_cov_2.294444_g65360_i0reverse_frame_3 - 0.084 12.8 0.4 0.082 12.8 0.4 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex sub unit 1 C-terminal domain YmgB PF10798.8 NODE_73301_length_215_cov_2.294444_g65360_i0forward_frame_2 - 8.4e-05 22.3 0.4 0.00012 21.9 0.4 1.3 1 0 0 1 1 1 1 Biofilm development protein YmgB/AriR V_ATPase_I PF01496.19 NODE_73299_length_215_cov_2.355556_g65358_i0reverse_frame_2 - 2.8e-06 25.6 0.1 3.1e-06 25.4 0.1 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family ZT_dimer PF16916.5 NODE_73299_length_215_cov_2.355556_g65358_i0forward_frame_2 - 0.12 12.5 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain of Zinc Transporter NB PF04159.13 NODE_73294_length_215_cov_2.444444_g65353_i0forward_frame_2 - 0.057 13.5 0.1 0.061 13.4 0.1 1.2 1 0 0 1 1 1 0 NB glycoprotein DUF2536 PF10750.9 NODE_73293_length_215_cov_2.444444_g65352_i0reverse_frame_2 - 0.0089 15.9 0.4 0.012 15.5 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2536) UPF0242 PF06785.11 NODE_73293_length_215_cov_2.444444_g65352_i0forward_frame_3 - 2.8 8.0 6.2 3.1 7.9 6.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ZT_dimer PF16916.5 NODE_73292_length_215_cov_2.466667_g65351_i0reverse_frame_3 - 0.099 12.8 0.3 0.12 12.5 0.3 1.1 1 0 0 1 1 1 0 Dimerisation domain of Zinc Transporter zf-IS66 PF13005.7 NODE_73290_length_215_cov_2.494444_g65349_i0reverse_frame_2 - 0.09 13.2 0.3 0.15 12.5 0.3 1.3 1 0 0 1 1 1 0 zinc-finger binding domain of transposase IS66 CiPC PF15800.5 NODE_73290_length_215_cov_2.494444_g65349_i0forward_frame_3 - 0.15 11.8 0.0 0.16 11.7 0.0 1.0 1 0 0 1 1 1 0 Clock interacting protein circadian IN_DBD_C PF00552.21 NODE_73289_length_215_cov_2.511111_g65348_i0forward_frame_3 - 0.0033 16.7 1.9 0.0045 16.2 1.9 1.3 1 0 0 1 1 1 1 Integrase DNA binding domain Pkinase PF00069.25 NODE_73275_length_215_cov_3.300000_g65334_i0forward_frame_3 - 3.3e-10 39.8 0.0 3.8e-10 39.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_73275_length_215_cov_3.300000_g65334_i0forward_frame_3 - 0.0013 18.0 0.0 0.0016 17.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4752 PF15944.5 NODE_73275_length_215_cov_3.300000_g65334_i0forward_frame_2 - 0.088 12.9 0.2 0.13 12.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) Amidase PF01425.21 NODE_73273_length_215_cov_3.450000_g65332_i0reverse_frame_2 - 3.4e-05 23.0 0.0 3.7e-05 22.9 0.0 1.0 1 0 0 1 1 1 1 Amidase ChpXY PF10216.9 NODE_73273_length_215_cov_3.450000_g65332_i0forward_frame_2 - 0.0069 15.6 0.2 0.0079 15.4 0.2 1.0 1 0 0 1 1 1 1 CO2 hydration protein (ChpXY) LCD1 PF09798.9 NODE_73272_length_215_cov_3.744444_g65331_i0reverse_frame_3 - 0.069 11.7 4.6 0.073 11.6 4.6 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein Bclx_interact PF08945.10 NODE_73272_length_215_cov_3.744444_g65331_i0reverse_frame_3 - 0.086 12.6 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Bcl-x interacting, BH3 domain DUF4741 PF15897.5 NODE_73271_length_215_cov_3.855556_g65330_i0reverse_frame_2 - 0.09 12.6 1.2 0.098 12.5 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) Brr6_like_C_C PF10104.9 NODE_73271_length_215_cov_3.855556_g65330_i0forward_frame_2 - 0.013 15.2 0.2 0.016 15.0 0.2 1.1 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain GRASP55_65 PF04495.14 NODE_73268_length_215_cov_4.211111_g65327_i0forward_frame_2 - 6.6e-11 42.7 0.0 7.8e-11 42.5 0.0 1.0 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain SAM35 PF10806.8 NODE_73268_length_215_cov_4.211111_g65327_i0forward_frame_2 - 0.16 12.2 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 SAM35, subunit of SAM coomplex EF_TS PF00889.19 NODE_73264_length_215_cov_4.633333_g65323_i0forward_frame_2 - 7.6e-22 77.9 0.6 8.2e-22 77.8 0.6 1.0 1 0 0 1 1 1 1 Elongation factor TS Polyketide_cyc PF03364.20 NODE_73264_length_215_cov_4.633333_g65323_i0forward_frame_2 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport YojJ PF10372.9 NODE_73261_length_215_cov_5.222222_g65320_i0forward_frame_3 - 0.053 13.6 1.0 0.14 12.3 0.0 1.9 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Titin_Ig-rpts PF06582.12 NODE_73261_length_215_cov_5.222222_g65320_i0forward_frame_2 - 0.15 12.0 1.0 0.25 11.3 1.0 1.2 1 0 0 1 1 1 0 Titin repeat Rab_bind PF16704.5 NODE_73258_length_215_cov_6.966667_g65317_i0reverse_frame_2 - 0.19 11.8 0.5 0.3 11.2 0.5 1.3 1 1 0 1 1 1 0 Rab binding domain DUF3824 PF12868.7 NODE_73253_length_215_cov_28.727778_g65312_i0reverse_frame_3 - 1.7 9.3 4.6 2.3 8.9 4.6 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) IL4_i_Ig PF18258.1 NODE_73250_length_215_cov_31.344444_g65309_i0reverse_frame_2 - 0.02 15.1 0.1 0.031 14.5 0.1 1.3 1 0 0 1 1 1 0 Interleukin-4 inducing immunoglobulin-binding domain tRNA_m1G_MT PF01746.21 NODE_73248_length_215_cov_36.155556_g65307_i0forward_frame_3 - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 tRNA (Guanine-1)-methyltransferase IQ PF00612.27 NODE_73247_length_215_cov_38.205556_g65306_i0reverse_frame_2 - 0.55 10.2 5.4 1.7 8.7 0.3 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif DPM3 PF08285.11 NODE_73246_length_215_cov_38.588889_g65305_i0reverse_frame_2 - 2 8.7 4.8 2.1 8.6 4.8 1.1 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Me-amine-dh_L PF02975.14 NODE_73244_length_215_cov_41.966667_g65303_i0reverse_frame_3 - 0.014 15.9 0.4 0.014 15.9 0.4 1.0 1 0 0 1 1 1 0 Methylamine dehydrogenase, L chain Nodulin_late PF07127.11 NODE_73244_length_215_cov_41.966667_g65303_i0forward_frame_2 - 3.7 8.0 5.8 0.26 11.6 1.0 1.6 2 0 0 2 2 2 0 Late nodulin protein Gyro_capsid PF04162.12 NODE_73243_length_215_cov_42.944444_g65302_i0forward_frame_3 - 0.12 10.9 0.0 0.13 10.7 0.0 1.0 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) TAT_signal PF10518.9 NODE_73243_length_215_cov_42.944444_g65302_i0forward_frame_3 - 0.25 11.3 1.2 0.36 10.8 1.2 1.2 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence DUF2593 PF10767.9 NODE_73239_length_215_cov_44.733333_g65298_i0forward_frame_2 - 0.045 13.8 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2593) DUF1072 PF06380.11 NODE_73238_length_215_cov_45.405556_g65297_i0reverse_frame_2 - 0.32 10.9 7.8 0.53 10.2 7.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) Imm72 PF15584.6 NODE_73234_length_215_cov_47.772222_g65293_i0forward_frame_3 - 0.04 14.0 0.0 0.046 13.8 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 72 DUF5346 PF17281.2 NODE_73231_length_215_cov_49.216667_g65290_i0forward_frame_3 - 0.019 15.0 0.4 0.022 14.8 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5346) HydF_tetramer PF18133.1 NODE_73231_length_215_cov_49.216667_g65290_i0forward_frame_2 - 0.08 12.7 0.2 0.094 12.5 0.2 1.2 1 0 0 1 1 1 0 Hydrogen maturase F tetramerization domain EPV_E5 PF08135.11 NODE_73228_length_215_cov_50.988889_g65287_i0forward_frame_3 - 0.5 10.8 6.0 1.1 9.7 6.0 1.6 1 0 0 1 1 1 0 Major transforming protein E5 family TAFII55_N PF04658.13 NODE_73225_length_215_cov_54.511111_g65284_i0reverse_frame_3 - 0.0046 16.7 0.2 0.0054 16.5 0.2 1.0 1 0 0 1 1 1 1 TAFII55 protein conserved region Cortexin PF11057.8 NODE_73219_length_215_cov_57.988889_g65278_i0reverse_frame_3 - 0.24 11.3 2.1 0.27 11.1 0.0 1.9 2 0 0 2 2 2 0 Cortexin of kidney Flocculin_t3 PF13928.6 NODE_73219_length_215_cov_57.988889_g65278_i0reverse_frame_2 - 0.04 14.4 0.7 0.054 14.0 0.7 1.2 1 0 0 1 1 1 0 Flocculin type 3 repeat CYYR1 PF10873.8 NODE_73218_length_215_cov_58.022222_g65277_i0reverse_frame_2 - 0.0041 17.6 3.0 0.0043 17.5 3.0 1.0 1 0 0 1 1 1 1 Cysteine and tyrosine-rich protein 1 DUF1700 PF08006.11 NODE_73216_length_215_cov_60.855556_g65275_i0forward_frame_3 - 5.4 6.5 9.2 6 6.4 9.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF5372 PF17342.2 NODE_73212_length_215_cov_65.438889_g65271_i0forward_frame_3 - 0.17 12.3 0.0 0.25 11.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5372) Folate_carrier PF01770.18 NODE_73210_length_215_cov_67.327778_g65269_i0forward_frame_3 - 0.056 12.2 0.5 0.051 12.3 0.5 1.0 1 0 0 1 1 1 0 Reduced folate carrier Ribosomal_S4e PF00900.20 NODE_73210_length_215_cov_67.327778_g65269_i0forward_frame_2 - 0.086 12.8 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal family S4e Homeodomain PF00046.29 NODE_73209_length_215_cov_68.005556_g65268_i0forward_frame_3 - 0.11 12.3 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Homeodomain DUF809 PF05663.11 NODE_73202_length_215_cov_74.527778_g65261_i0reverse_frame_2 - 3.1 7.9 5.9 3.3 7.8 5.9 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF809) Comm PF15957.5 NODE_73201_length_215_cov_75.572222_g65260_i0reverse_frame_2 - 0.28 11.5 4.8 0.36 11.2 4.8 1.2 1 0 0 1 1 1 0 Commissureless TAP35_44 PF07265.11 NODE_73200_length_215_cov_76.416667_g65259_i0reverse_frame_3 - 0.26 11.3 0.2 0.26 11.3 0.2 1.7 2 0 0 2 2 2 0 Tapetum specific protein TAP35/TAP44 DUF4605 PF15378.6 NODE_73200_length_215_cov_76.416667_g65259_i0reverse_frame_2 - 0.075 12.9 4.1 0.14 12.0 4.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4605) Pox_D5 PF03288.16 NODE_73198_length_215_cov_84.966667_g65257_i0forward_frame_3 - 0.11 13.0 0.3 0.14 12.6 0.3 1.2 1 0 0 1 1 1 0 Poxvirus D5 protein-like PutA_N PF18083.1 NODE_73197_length_215_cov_86.038889_g65256_i0forward_frame_2 - 0.085 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Proline utilization A N-terminal domain FeoB_N PF02421.18 NODE_73196_length_215_cov_97.316667_g65255_i0forward_frame_3 - 0.0095 15.5 2.1 0.011 15.3 2.1 1.0 1 0 0 1 1 1 1 Ferrous iron transport protein B Tmpp129 PF10272.9 NODE_73192_length_215_cov_111.650000_g65251_i0forward_frame_3 - 0.0094 15.3 2.2 0.01 15.2 2.2 1.1 1 0 0 1 1 1 1 Putative transmembrane protein precursor DUF2380 PF09533.10 NODE_73191_length_215_cov_120.444444_g65250_i0reverse_frame_2 - 0.04 13.5 1.3 0.047 13.3 1.3 1.2 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) Matrilin_ccoil PF10393.9 NODE_73189_length_215_cov_137.122222_g65248_i0reverse_frame_2 - 0.16 11.8 5.6 0.97 9.3 0.3 2.1 1 1 1 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin Mdv1 PF11542.8 NODE_73188_length_215_cov_154.133333_g65247_i0forward_frame_3 - 0.071 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial division protein 1 SLC3A2_N PF16028.5 NODE_73186_length_215_cov_193.855556_g65245_i0reverse_frame_2 - 0.12 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus SUIM_assoc PF16619.5 NODE_73185_length_215_cov_199.155556_g65244_i0reverse_frame_2 - 0.03 14.4 0.9 0.037 14.1 0.9 1.1 1 0 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 CbtA_toxin PF06755.12 NODE_73180_length_215_cov_238.477778_g65239_i0reverse_frame_3 - 0.13 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 CbtA_toxin of type IV toxin-antitoxin system RAP1 PF07218.11 NODE_73180_length_215_cov_238.477778_g65239_i0forward_frame_3 - 6.5 4.9 7.1 6.8 4.8 7.1 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) PsaF PF17550.2 NODE_73178_length_215_cov_302.622222_g65237_i0forward_frame_3 - 0.061 12.8 4.0 0.069 12.7 4.0 1.2 1 0 0 1 1 1 0 Family of unknown function TadE PF07811.12 NODE_73176_length_215_cov_486.405556_g65235_i0forward_frame_3 - 0.75 10.1 6.3 1.6 9.1 1.0 2.1 2 0 0 2 2 2 0 TadE-like protein PsbN PF02468.15 NODE_73176_length_215_cov_486.405556_g65235_i0forward_frame_3 - 7.8 6.4 5.8 1.3 9.0 0.3 2.1 2 1 0 2 2 2 0 Photosystem II reaction centre N protein (psbN) RL11D PF11088.8 NODE_73175_length_215_cov_795.000000_g65234_i0forward_frame_3 - 0.065 13.5 0.5 0.07 13.4 0.5 1.1 1 0 0 1 1 1 0 Glycoprotein encoding membrane proteins RL5A and RL6 Methyltransf_32 PF13679.6 NODE_73170_length_215_cov_85802.911111_g65229_i0reverse_frame_2 - 0.043 13.8 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain DUF1435 PF07256.12 NODE_73166_length_216_cov_0.872928_g65225_i0reverse_frame_2 - 0.13 12.4 6.2 0.16 12.1 6.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1435) OB_Dis3 PF17849.1 NODE_73162_length_216_cov_0.883978_g65221_i0reverse_frame_3 - 0.034 14.2 0.1 0.042 13.9 0.1 1.1 1 0 0 1 1 1 0 Dis3-like cold-shock domain 2 (CSD2) PCAF_N PF06466.11 NODE_73159_length_216_cov_0.883978_g65218_i0reverse_frame_3 - 0.018 14.6 0.1 0.02 14.5 0.1 1.0 1 0 0 1 1 1 0 PCAF (P300/CBP-associated factor) N-terminal domain Glycos_transf_1 PF00534.20 NODE_73153_length_216_cov_0.911602_g65212_i0forward_frame_3 - 0.002 17.7 0.1 0.0023 17.5 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_tran_28_C PF04101.16 NODE_73153_length_216_cov_0.911602_g65212_i0forward_frame_3 - 0.0025 17.8 0.1 0.0065 16.5 0.1 1.6 1 1 1 2 2 2 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_4 PF13692.6 NODE_73153_length_216_cov_0.911602_g65212_i0forward_frame_3 - 0.043 14.2 0.1 0.047 14.1 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF2256 PF10013.9 NODE_73150_length_216_cov_0.977901_g65209_i0reverse_frame_3 - 0.023 14.8 0.3 0.042 14.0 0.3 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF4789 PF16033.5 NODE_73149_length_216_cov_0.983425_g65208_i0forward_frame_3 - 0.054 14.0 3.8 0.059 13.9 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4789) Ras PF00071.22 NODE_73141_length_216_cov_1.022099_g65200_i0reverse_frame_2 - 0.0095 15.6 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 1 Ras family MIT_C PF16565.5 NODE_73138_length_216_cov_1.055249_g65197_i0reverse_frame_3 - 0.028 14.4 0.0 0.028 14.4 0.0 1.0 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT ABC_export PF16962.5 NODE_73138_length_216_cov_1.055249_g65197_i0forward_frame_3 - 0.016 13.7 0.4 0.016 13.7 0.4 1.0 1 0 0 1 1 1 0 Putative ABC exporter HupE_UreJ_2 PF13795.6 NODE_73138_length_216_cov_1.055249_g65197_i0forward_frame_3 - 0.059 13.0 0.0 0.065 12.9 0.0 1.1 1 0 0 1 1 1 0 HupE / UreJ protein GPS PF01825.21 NODE_73135_length_216_cov_1.088398_g65194_i0forward_frame_3 - 0.022 15.3 1.0 0.022 15.3 1.0 2.0 2 0 0 2 2 2 0 GPCR proteolysis site, GPS, motif CFC PF09443.10 NODE_73134_length_216_cov_1.093923_g65193_i0forward_frame_3 - 0.0092 15.8 2.3 0.0092 15.8 2.3 1.9 2 0 0 2 2 2 1 Cripto_Frl-1_Cryptic (CFC) DUF3055 PF11256.8 NODE_73133_length_216_cov_1.099448_g65192_i0forward_frame_2 - 0.025 14.8 0.0 0.031 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3055) TP53IP5 PF15331.6 NODE_73127_length_216_cov_1.143646_g65186_i0forward_frame_3 - 0.062 13.4 2.3 0.084 13.0 2.3 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 DUF1289 PF06945.13 NODE_73125_length_216_cov_1.160221_g65184_i0reverse_frame_3 - 0.091 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) HCV_NS1 PF01560.17 NODE_73124_length_216_cov_1.176796_g65183_i0forward_frame_2 - 0.069 11.8 1.0 0.071 11.8 1.0 1.1 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein E2/NS1 Leu_zip PF15294.6 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.0056 16.2 2.5 0.0062 16.1 2.5 1.0 1 0 0 1 1 1 1 Leucine zipper ZapB PF06005.12 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.0077 16.6 4.0 0.0077 16.6 4.0 1.4 1 1 0 1 1 1 1 Cell division protein ZapB TMF_DNA_bd PF12329.8 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.027 14.4 3.1 0.039 14.0 3.1 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DivIC PF04977.15 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.031 14.1 1.9 0.043 13.6 1.9 1.2 1 0 0 1 1 1 0 Septum formation initiator Med4 PF10018.9 NODE_73123_length_216_cov_1.176796_g65182_i0reverse_frame_2 - 0.044 13.5 1.3 0.045 13.4 1.3 1.1 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 Fungus-induced PF10917.8 NODE_73123_length_216_cov_1.176796_g65182_i0forward_frame_3 - 4.9 7.5 5.9 0.82 10.0 1.0 2.0 2 0 0 2 2 2 0 Fungus-induced protein zf-met2 PF12907.7 NODE_73120_length_216_cov_1.193370_g65179_i0reverse_frame_2 - 0.34 11.1 3.8 0.52 10.5 3.8 1.3 1 0 0 1 1 1 0 Zinc-binding CAMSAP_CC1 PF17095.5 NODE_73119_length_216_cov_1.198895_g65178_i0reverse_frame_2 - 0.12 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Spectrin-binding region of Ca2+-Calmodulin DUF3370 PF11850.8 NODE_73118_length_216_cov_1.209945_g65177_i0reverse_frame_3 - 0.014 14.3 0.1 0.015 14.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3370) PUF PF00806.19 NODE_73118_length_216_cov_1.209945_g65177_i0reverse_frame_3 - 0.1 12.3 0.1 0.24 11.1 0.1 1.6 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat PriA_C PF18074.1 NODE_73117_length_216_cov_1.215470_g65176_i0forward_frame_3 - 0.032 15.1 0.6 0.035 14.9 0.6 1.2 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain PH PF00169.29 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 1.7e-06 28.5 0.1 2e-06 28.3 0.1 1.1 1 0 0 1 1 1 1 PH domain PH_6 PF15406.6 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 0.011 16.0 0.1 0.014 15.7 0.1 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain PH_13 PF16652.5 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 0.024 14.4 0.0 0.027 14.3 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain PH_11 PF15413.6 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 0.048 14.1 0.1 0.055 13.9 0.1 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain PH_9 PF15410.6 NODE_73116_length_216_cov_1.215470_g65175_i0reverse_frame_2 - 0.12 12.7 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks381.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks381.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks381.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks381.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:22:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LIME1 PF15332.6 NODE_73114_length_216_cov_1.243094_g65173_i0reverse_frame_3 - 0.068 12.8 0.0 0.075 12.6 0.0 1.1 1 0 0 1 1 1 0 Lck-interacting transmembrane adapter 1 zinc_ribbon_6 PF14599.6 NODE_73114_length_216_cov_1.243094_g65173_i0reverse_frame_2 - 2.5 8.2 8.2 0.16 12.0 2.7 1.8 2 0 0 2 2 2 0 Zinc-ribbon zf-B_box PF00643.24 NODE_73110_length_216_cov_1.259669_g65169_i0reverse_frame_2 - 0.0003 20.9 6.8 0.0003 20.9 6.8 1.6 2 0 0 2 2 2 1 B-box zinc finger DUF3987 PF13148.6 NODE_73107_length_216_cov_1.281768_g65166_i0reverse_frame_3 - 0.02 13.9 0.1 0.024 13.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) BshC PF10079.9 NODE_73104_length_216_cov_1.292818_g65163_i0reverse_frame_3 - 0.085 11.6 0.2 0.085 11.6 0.2 1.0 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC DUF4342 PF14242.6 NODE_73101_length_216_cov_1.303867_g65160_i0forward_frame_2 - 4.4 7.4 7.0 5.6 7.0 7.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) zf-HC5HC2H_2 PF13832.6 NODE_73100_length_216_cov_1.303867_g65159_i0reverse_frame_3 - 3.3e-05 24.0 1.1 3.3e-05 24.0 1.1 1.7 1 1 1 2 2 2 1 PHD-zinc-finger like domain DM PF00751.18 NODE_73100_length_216_cov_1.303867_g65159_i0reverse_frame_3 - 6.1 6.8 11.3 3.4 7.7 8.9 2.0 1 1 0 1 1 1 0 DM DNA binding domain 2Fe-2S_thioredx PF01257.19 NODE_73100_length_216_cov_1.303867_g65159_i0reverse_frame_2 - 0.057 13.3 0.1 0.059 13.2 0.1 1.2 1 0 0 1 1 1 0 Thioredoxin-like [2Fe-2S] ferredoxin TMEM107 PF14995.6 NODE_73100_length_216_cov_1.303867_g65159_i0forward_frame_3 - 3.4 8.1 11.2 3.7 8.0 11.2 1.0 1 0 0 1 1 1 0 Transmembrane protein HJURP_C PF12347.8 NODE_73099_length_216_cov_1.314917_g65158_i0reverse_frame_2 - 0.029 14.4 0.1 0.035 14.1 0.1 1.2 1 0 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat Gp49 PF05973.14 NODE_73099_length_216_cov_1.314917_g65158_i0reverse_frame_2 - 0.042 14.0 0.0 0.05 13.7 0.0 1.1 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) EutA PF06277.11 NODE_73098_length_216_cov_1.320442_g65157_i0forward_frame_3 - 0.08 11.8 0.0 0.086 11.7 0.0 1.0 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutA Pga1 PF10333.9 NODE_73097_length_216_cov_1.320442_g65156_i0reverse_frame_2 - 0.013 15.3 0.9 0.013 15.3 0.9 1.1 1 0 0 1 1 1 0 GPI-Mannosyltransferase II co-activator tRNA-synt_2 PF00152.20 NODE_73094_length_216_cov_1.320442_g65153_i0forward_frame_2 - 6.6e-20 71.4 0.0 6.9e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) AAA PF00004.29 NODE_73090_length_216_cov_1.325967_g65149_i0forward_frame_3 - 4.2e-05 24.0 0.0 4.4e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) p47_phox_C PF08944.11 NODE_73090_length_216_cov_1.325967_g65149_i0forward_frame_2 - 0.27 10.7 1.4 0.45 10.0 1.4 1.3 1 0 0 1 1 1 0 NADPH oxidase subunit p47Phox, C terminal domain Strabismus PF06638.11 NODE_73089_length_216_cov_1.325967_g65148_i0reverse_frame_3 - 0.75 8.4 7.1 0.88 8.1 7.1 1.0 1 0 0 1 1 1 0 Strabismus protein SUR7 PF06687.12 NODE_73089_length_216_cov_1.325967_g65148_i0reverse_frame_3 - 0.91 9.1 10.9 1 8.9 10.9 1.0 1 0 0 1 1 1 0 SUR7/PalI family NicO PF03824.16 NODE_73089_length_216_cov_1.325967_g65148_i0reverse_frame_3 - 3 7.1 11.5 3.4 6.9 11.5 1.0 1 0 0 1 1 1 0 High-affinity nickel-transport protein DUF4407 PF14362.6 NODE_73089_length_216_cov_1.325967_g65148_i0reverse_frame_3 - 8 5.7 8.6 8.7 5.6 8.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CLAMP PF14769.6 NODE_73086_length_216_cov_1.325967_g65145_i0reverse_frame_3 - 2.3 8.7 8.9 8.5 6.9 2.3 2.2 1 1 1 2 2 2 0 Flagellar C1a complex subunit C1a-32 zf_CopZ PF18423.1 NODE_73085_length_216_cov_1.325967_g65144_i0reverse_frame_3 - 0.047 13.6 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Zinc binding domain ox_reductase_C PF08635.10 NODE_73081_length_216_cov_1.325967_g65140_i0reverse_frame_2 - 0.053 13.2 0.1 0.06 13.0 0.1 1.1 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain Wzy_C_2 PF11846.8 NODE_73077_length_216_cov_1.386740_g65136_i0forward_frame_2 - 0.097 12.6 1.0 0.12 12.3 1.0 1.0 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal Metal_CEHH PF14455.6 NODE_73076_length_216_cov_1.397790_g65135_i0reverse_frame_2 - 0.17 11.5 0.0 0.18 11.4 0.0 1.1 1 0 0 1 1 1 0 Predicted metal binding domain AIG1 PF04548.16 NODE_73076_length_216_cov_1.397790_g65135_i0forward_frame_2 - 0.09 12.1 0.1 0.1 11.9 0.1 1.0 1 0 0 1 1 1 0 AIG1 family DUF5131 PF07505.11 NODE_73075_length_216_cov_1.397790_g65134_i0forward_frame_2 - 0.15 11.4 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF5131) TT_ORF1 PF02956.14 NODE_73072_length_216_cov_1.425414_g65131_i0reverse_frame_2 - 4 6.0 25.4 4.2 5.9 25.4 1.0 1 0 0 1 1 1 0 TT viral orf 1 FoP_duplication PF13865.6 NODE_73072_length_216_cov_1.425414_g65131_i0reverse_frame_2 - 5.8 7.5 12.3 7.5 7.2 12.3 1.1 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 UPF0061 PF02696.14 NODE_73072_length_216_cov_1.425414_g65131_i0forward_frame_2 - 0.038 12.8 0.3 0.042 12.6 0.3 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family DUF4195 PF13836.6 NODE_73069_length_216_cov_1.430939_g65128_i0forward_frame_2 - 0.031 14.4 3.0 0.038 14.1 3.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4195) DUF1359 PF07097.11 NODE_73068_length_216_cov_1.453039_g65127_i0forward_frame_2 - 0.089 13.0 0.2 0.099 12.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1359) RNA_binding PF01877.17 NODE_73066_length_216_cov_1.464088_g65125_i0reverse_frame_2 - 0.056 13.7 0.1 0.067 13.5 0.1 1.1 1 0 0 1 1 1 0 RNA binding FluMu_N PF17891.1 NODE_73062_length_216_cov_1.524862_g65121_i0reverse_frame_2 - 0.17 11.7 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Mu-like prophage FluMu N-terminal domain Herpes_LMP1 PF05297.11 NODE_73060_length_216_cov_1.541436_g65119_i0forward_frame_3 - 9.3 5.3 8.6 9.7 5.3 8.6 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF2973 PF11189.8 NODE_73058_length_216_cov_1.546961_g65117_i0reverse_frame_3 - 0.11 12.6 0.2 0.14 12.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) DUF4599 PF15371.6 NODE_73058_length_216_cov_1.546961_g65117_i0reverse_frame_2 - 0.0084 16.6 0.6 0.01 16.4 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4599) Defensin_2 PF01097.18 NODE_73058_length_216_cov_1.546961_g65117_i0forward_frame_2 - 0.13 12.2 1.7 0.13 12.2 1.7 2.1 2 0 0 2 2 2 0 Arthropod defensin Lamprin PF06403.11 NODE_73057_length_216_cov_1.552486_g65116_i0reverse_frame_3 - 0.00045 20.2 2.3 0.00051 20.0 2.3 1.1 1 0 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_73057_length_216_cov_1.552486_g65116_i0reverse_frame_2 - 0.029 14.3 2.7 0.037 14.0 2.7 1.1 1 0 0 1 1 1 0 Lamprin Cytochrom_C1 PF02167.15 NODE_73054_length_216_cov_1.580110_g65113_i0reverse_frame_3 - 0.077 12.7 0.0 0.077 12.7 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C1 family Ins_beta PF03488.14 NODE_73053_length_216_cov_1.580110_g65112_i0reverse_frame_2 - 0.011 15.7 0.2 0.03 14.3 0.0 1.7 2 0 0 2 2 2 0 Nematode insulin-related peptide beta type DUF4596 PF15363.6 NODE_73053_length_216_cov_1.580110_g65112_i0reverse_frame_2 - 0.049 13.9 0.0 0.079 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4596) Toxin_35 PF10530.9 NODE_73052_length_216_cov_1.585635_g65111_i0forward_frame_3 - 0.022 14.7 6.3 0.028 14.4 6.3 1.2 1 0 0 1 1 1 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold Defensin_int PF17858.1 NODE_73052_length_216_cov_1.585635_g65111_i0forward_frame_3 - 0.72 9.9 6.3 1 9.4 0.7 2.2 2 0 0 2 2 2 0 Platypus intermediate defensin-like peptide DUF4704 PF15787.5 NODE_73050_length_216_cov_1.602210_g65109_i0reverse_frame_2 - 0.012 14.9 0.1 0.013 14.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4704) Nitr_red_alph_N PF14710.6 NODE_73044_length_216_cov_1.674033_g65103_i0reverse_frame_2 - 1.4 9.4 4.9 2 8.9 4.9 1.2 1 0 0 1 1 1 0 Respiratory nitrate reductase alpha N-terminal SPATA3 PF15662.5 NODE_73043_length_216_cov_1.679558_g65102_i0reverse_frame_3 - 0.25 12.0 8.1 0.33 11.6 8.1 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family Zn_Tnp_IS1 PF03811.13 NODE_73043_length_216_cov_1.679558_g65102_i0reverse_frame_3 - 0.38 10.5 7.1 1.1 9.1 0.1 2.5 1 1 1 2 2 2 0 InsA N-terminal domain RVT_1 PF00078.27 NODE_73042_length_216_cov_1.690608_g65101_i0forward_frame_3 - 9.6e-07 28.5 0.0 1e-06 28.5 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) SMODS PF18144.1 NODE_73040_length_216_cov_1.701657_g65099_i0reverse_frame_3 - 0.027 14.6 0.1 0.028 14.6 0.1 1.1 1 0 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain Aldolase PF01081.19 NODE_73038_length_216_cov_1.734807_g65097_i0forward_frame_2 - 5.7e-34 117.3 0.0 6.1e-34 117.2 0.0 1.0 1 0 0 1 1 1 1 KDPG and KHG aldolase KDGP_aldolase PF07071.11 NODE_73038_length_216_cov_1.734807_g65097_i0forward_frame_2 - 0.23 11.2 0.0 0.27 11.0 0.0 1.0 1 0 0 1 1 1 0 KDGP aldolase Cyclin_N PF00134.23 NODE_73037_length_216_cov_1.740331_g65096_i0forward_frame_3 - 4.6e-05 23.2 1.0 5.2e-05 23.0 1.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain CAMSAP_CC1 PF17095.5 NODE_73034_length_216_cov_1.740331_g65093_i0reverse_frame_3 - 0.02 14.8 0.0 0.026 14.4 0.0 1.2 1 0 0 1 1 1 0 Spectrin-binding region of Ca2+-Calmodulin ACT PF01842.25 NODE_73031_length_216_cov_1.756906_g65090_i0forward_frame_2 - 0.055 13.2 0.0 0.086 12.6 0.0 1.3 1 0 0 1 1 1 0 ACT domain YcgR_2 PF12945.7 NODE_73031_length_216_cov_1.756906_g65090_i0forward_frame_2 - 0.07 13.3 0.0 0.077 13.1 0.0 1.2 1 0 0 1 1 1 0 Flagellar protein YcgR Attacin_N PF03768.15 NODE_73030_length_216_cov_1.762431_g65089_i0reverse_frame_3 - 0.003 17.6 0.1 0.0035 17.4 0.1 1.3 1 0 0 1 1 1 1 Attacin, N-terminal region Citrus_P18 PF05520.11 NODE_73027_length_216_cov_1.762431_g65086_i0forward_frame_3 - 0.00091 19.0 0.2 0.00098 18.9 0.2 1.1 1 0 0 1 1 1 1 Citrus tristeza virus P18 protein DUF1428 PF07237.11 NODE_73023_length_216_cov_1.767956_g65082_i0forward_frame_3 - 0.14 12.4 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1428) DUF5439 PF17507.2 NODE_73021_length_216_cov_1.767956_g65080_i0reverse_frame_2 - 0.082 13.1 5.9 0.44 10.8 0.8 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5439) RcbX PF02341.15 NODE_73018_length_216_cov_1.790055_g65077_i0reverse_frame_2 - 0.13 12.5 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 RbcX protein GCP_N_terminal PF17681.1 NODE_73017_length_216_cov_1.806630_g65076_i0reverse_frame_3 - 0.035 13.7 0.1 0.041 13.5 0.1 1.0 1 0 0 1 1 1 0 Gamma tubulin complex component N-terminal HTH_Tnp_ISL3 PF13542.6 NODE_73016_length_216_cov_1.806630_g65075_i0forward_frame_3 - 0.21 11.0 6.3 3.7 7.0 4.5 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 DUF1509 PF07420.11 NODE_73016_length_216_cov_1.806630_g65075_i0forward_frame_3 - 2.2 7.1 8.6 2.3 7.1 8.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) TT_ORF1 PF02956.14 NODE_73016_length_216_cov_1.806630_g65075_i0forward_frame_3 - 6.2 5.4 12.2 6.6 5.3 12.2 1.0 1 0 0 1 1 1 0 TT viral orf 1 Arch_fla_DE PF04659.13 NODE_73015_length_216_cov_1.812155_g65074_i0reverse_frame_3 - 0.034 14.0 0.0 0.037 13.9 0.0 1.1 1 0 0 1 1 1 0 Archaeal flagella protein Vpu PF00558.19 NODE_73013_length_216_cov_1.856354_g65072_i0reverse_frame_2 - 0.018 14.8 0.6 0.021 14.6 0.6 1.1 1 0 0 1 1 1 0 Vpu protein DNA_methylase PF00145.17 NODE_73011_length_216_cov_1.861878_g65070_i0reverse_frame_2 - 4.3e-05 23.0 0.5 0.00071 19.0 0.1 2.0 1 1 1 2 2 2 2 C-5 cytosine-specific DNA methylase TPR_11 PF13414.6 NODE_73010_length_216_cov_1.861878_g65069_i0reverse_frame_3 - 0.00012 21.7 0.0 0.00034 20.2 0.0 1.8 2 0 0 2 2 2 1 TPR repeat TPR_1 PF00515.28 NODE_73010_length_216_cov_1.861878_g65069_i0reverse_frame_3 - 0.00061 19.5 0.5 0.001 18.8 0.5 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_73010_length_216_cov_1.861878_g65069_i0reverse_frame_3 - 0.14 12.5 0.0 0.24 11.9 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Mac PF12464.8 NODE_73010_length_216_cov_1.861878_g65069_i0reverse_frame_2 - 0.26 11.6 2.5 0.38 11.0 2.5 1.2 1 0 0 1 1 1 0 Maltose acetyltransferase Polysacc_synt PF01943.17 NODE_73007_length_216_cov_1.878453_g65066_i0reverse_frame_3 - 0.051 12.9 0.1 0.053 12.9 0.1 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF4811 PF16069.5 NODE_73007_length_216_cov_1.878453_g65066_i0forward_frame_3 - 0.0075 16.2 0.4 0.0079 16.1 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4811) NAAA-beta PF15508.6 NODE_73007_length_216_cov_1.878453_g65066_i0forward_frame_2 - 0.19 12.1 0.0 0.26 11.6 0.0 1.2 1 0 0 1 1 1 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase Pro_isomerase PF00160.21 NODE_73002_length_216_cov_1.911602_g65061_i0reverse_frame_2 - 0.1 12.9 0.0 0.1 12.9 0.0 1.0 1 0 0 1 1 1 0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Lum_binding PF00677.17 NODE_73001_length_216_cov_1.922652_g65060_i0reverse_frame_3 - 0.14 12.1 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Lumazine binding domain CSTF1_dimer PF16699.5 NODE_72997_length_216_cov_1.933702_g65056_i0forward_frame_3 - 0.1 12.4 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 Cleavage stimulation factor subunit 1, dimerisation domain DUF1398 PF07166.11 NODE_72997_length_216_cov_1.933702_g65056_i0forward_frame_2 - 0.036 14.1 0.2 0.04 14.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) CXCXC PF03128.14 NODE_72996_length_216_cov_1.972376_g65055_i0forward_frame_3 - 0.1 13.1 1.5 0.1 13.1 1.5 2.7 2 0 0 2 2 2 0 CXCXC repeat TMEM213 PF15192.6 NODE_72995_length_216_cov_1.983425_g65054_i0forward_frame_2 - 0.002 18.0 5.7 0.0025 17.7 5.7 1.2 1 0 0 1 1 1 1 TMEM213 family Herpes_UL92 PF03048.14 NODE_72995_length_216_cov_1.983425_g65054_i0forward_frame_2 - 0.74 9.6 6.7 0.78 9.5 6.7 1.2 1 0 0 1 1 1 0 UL92 family GAIN_A PF18619.1 NODE_72994_length_216_cov_1.983425_g65053_i0forward_frame_2 - 0.18 12.0 5.5 0.38 11.0 5.5 1.8 1 1 0 1 1 1 0 GPCR-Autoproteolysis-INducing (GAIN) subdomain A GBP PF02263.19 NODE_72993_length_216_cov_1.988950_g65052_i0reverse_frame_3 - 3.7e-16 59.2 0.1 4.2e-16 59.0 0.1 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain FAM150 PF15129.6 NODE_72989_length_216_cov_2.055249_g65048_i0reverse_frame_3 - 3 8.0 8.1 6 7.0 7.4 1.7 1 1 1 2 2 2 0 FAM150 family COP-gamma_platf PF08752.10 NODE_72988_length_216_cov_2.066298_g65047_i0reverse_frame_2 - 0.056 13.6 0.1 0.056 13.6 0.1 1.1 1 0 0 1 1 1 0 Coatomer gamma subunit appendage platform subdomain FLYWCH_u PF16662.5 NODE_72979_length_216_cov_2.171271_g65038_i0forward_frame_3 - 0.18 11.9 0.0 0.24 11.5 0.0 1.1 1 0 0 1 1 1 0 FLYWCH-type zinc finger-containing protein 1 CCB2_CCB4 PF11152.8 NODE_72973_length_216_cov_2.193370_g65032_i0forward_frame_3 - 0.033 13.5 0.0 0.037 13.3 0.0 1.0 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B, CCB2/CCB4 BioT2 PF15368.6 NODE_72972_length_216_cov_2.209945_g65031_i0reverse_frame_2 - 0.075 13.0 0.0 0.078 12.9 0.0 1.0 1 0 0 1 1 1 0 Spermatogenesis family BioT2 Phage_holin_2_1 PF04971.12 NODE_72966_length_216_cov_2.243094_g65025_i0reverse_frame_3 - 0.028 14.4 0.2 0.041 13.9 0.2 1.3 1 0 0 1 1 1 0 Bacteriophage P21 holin S TAFII28 PF04719.14 NODE_72965_length_216_cov_2.248619_g65024_i0reverse_frame_2 - 0.016 15.2 0.3 0.018 15.1 0.3 1.1 1 0 0 1 1 1 0 hTAFII28-like protein conserved region Vps23_core PF09454.10 NODE_72965_length_216_cov_2.248619_g65024_i0forward_frame_3 - 0.067 13.1 0.0 0.12 12.4 0.0 1.4 1 1 0 1 1 1 0 Vps23 core domain Y_phosphatase2 PF03162.13 NODE_72963_length_216_cov_2.287293_g65022_i0reverse_frame_3 - 0.05 13.2 0.1 0.052 13.1 0.1 1.0 1 0 0 1 1 1 0 Tyrosine phosphatase family KaiA PF07688.12 NODE_72962_length_216_cov_2.292818_g65021_i0reverse_frame_3 - 0.025 14.7 1.0 0.03 14.5 1.0 1.0 1 0 0 1 1 1 0 KaiA C-terminal domain Cytochrom_C1 PF02167.15 NODE_72960_length_216_cov_2.320442_g65019_i0forward_frame_3 - 0.084 12.6 0.5 0.09 12.5 0.5 1.1 1 0 0 1 1 1 0 Cytochrome C1 family RecR PF02132.15 NODE_72960_length_216_cov_2.320442_g65019_i0forward_frame_2 - 0.059 12.9 0.8 0.11 12.1 0.2 1.7 2 0 0 2 2 2 0 RecR protein TctB PF07331.11 NODE_72959_length_216_cov_2.325967_g65018_i0forward_frame_2 - 0.24 11.6 7.8 0.29 11.4 7.8 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Tubulin PF00091.25 NODE_72957_length_216_cov_2.342541_g65016_i0reverse_frame_3 - 4.8e-08 33.4 0.0 5.1e-08 33.3 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain TrmO_C PF18389.1 NODE_72957_length_216_cov_2.342541_g65016_i0forward_frame_3 - 0.032 14.3 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 TrmO C-terminal domain AP3D1 PF06375.11 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.011 15.9 9.9 0.013 15.7 9.9 1.0 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 YL1 PF05764.13 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.013 15.6 11.0 0.014 15.5 11.0 1.0 1 0 0 1 1 1 0 YL1 nuclear protein SR-25 PF10500.9 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.035 13.7 11.0 0.036 13.7 11.0 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein NESP55 PF06390.12 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.039 13.6 2.3 0.04 13.5 2.3 1.0 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) RNA_polI_A34 PF08208.11 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.057 13.5 11.0 0.062 13.4 11.0 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 TSGP1 PF07771.11 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 0.12 12.5 8.2 0.14 12.4 8.2 1.2 1 0 0 1 1 1 0 Tick salivary peptide group 1 Connexin PF00029.19 NODE_72955_length_216_cov_2.392265_g65014_i0reverse_frame_2 - 4 7.1 4.3 4.1 7.1 4.3 1.0 1 0 0 1 1 1 0 Connexin Phage_holin_3_6 PF07332.11 NODE_72955_length_216_cov_2.392265_g65014_i0forward_frame_3 - 0.021 14.9 1.6 0.024 14.7 1.6 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III TMEM18 PF14770.6 NODE_72955_length_216_cov_2.392265_g65014_i0forward_frame_3 - 0.15 12.0 3.2 0.18 11.8 3.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 DUF2574 PF10836.8 NODE_72954_length_216_cov_2.397790_g65013_i0reverse_frame_3 - 4.9e-21 74.4 0.1 6e-21 74.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2574) Afaf PF15339.6 NODE_72949_length_216_cov_2.419890_g65008_i0forward_frame_2 - 0.12 12.1 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Acrosome formation-associated factor Toxin_28 PF08115.11 NODE_72948_length_216_cov_2.419890_g65007_i0reverse_frame_3 - 3.1 7.7 7.8 0.18 11.7 2.0 1.9 1 1 1 2 2 2 0 SFI toxin family SCAB-PH PF17684.1 NODE_72948_length_216_cov_2.419890_g65007_i0reverse_frame_2 - 0.0021 18.3 0.5 0.0023 18.1 0.5 1.1 1 0 0 1 1 1 1 PH domain of plant-specific actin-binding protein FAM176 PF14851.6 NODE_72944_length_216_cov_2.535912_g65003_i0forward_frame_3 - 0.0057 16.3 0.2 0.0061 16.2 0.2 1.0 1 0 0 1 1 1 1 FAM176 family Pho88 PF10032.9 NODE_72944_length_216_cov_2.535912_g65003_i0forward_frame_3 - 0.03 13.6 0.1 0.035 13.4 0.1 1.1 1 0 0 1 1 1 0 Phosphate transport (Pho88) Comm PF15957.5 NODE_72944_length_216_cov_2.535912_g65003_i0forward_frame_3 - 0.031 14.6 0.0 0.034 14.5 0.0 1.1 1 0 0 1 1 1 0 Commissureless TMIE PF16038.5 NODE_72944_length_216_cov_2.535912_g65003_i0forward_frame_3 - 0.037 13.9 0.2 0.043 13.6 0.2 1.2 1 0 0 1 1 1 0 TMIE protein TMEM132D_C PF15706.5 NODE_72944_length_216_cov_2.535912_g65003_i0forward_frame_3 - 7.3 6.4 7.7 11 5.9 6.8 1.6 1 1 1 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Amb_V_allergen PF03913.13 NODE_72943_length_216_cov_2.541436_g65002_i0reverse_frame_3 - 0.0004 20.2 0.4 0.00052 19.9 0.4 1.1 1 0 0 1 1 1 1 Amb V Allergen DUF3099 PF11298.8 NODE_72941_length_216_cov_2.596685_g65000_i0reverse_frame_3 - 0.73 10.0 2.6 0.51 10.5 1.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3099) YbjN PF10722.9 NODE_72941_length_216_cov_2.596685_g65000_i0reverse_frame_2 - 9.3e-08 32.2 0.0 9.4e-08 32.2 0.0 1.0 1 0 0 1 1 1 1 Putative bacterial sensory transduction regulator malic PF00390.19 NODE_72941_length_216_cov_2.596685_g65000_i0reverse_frame_2 - 0.091 12.5 0.0 0.094 12.5 0.0 1.1 1 0 0 1 1 1 0 Malic enzyme, N-terminal domain Jas PF16135.5 NODE_72937_length_216_cov_2.646409_g64996_i0reverse_frame_3 - 0.032 14.4 2.1 0.038 14.2 1.5 1.4 1 1 0 1 1 1 0 TPL-binding domain in jasmonate signalling Hpt PF01627.23 NODE_72937_length_216_cov_2.646409_g64996_i0reverse_frame_2 - 3.3e-06 27.3 0.0 3.4e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Hpt domain Nse4_C PF08743.10 NODE_72937_length_216_cov_2.646409_g64996_i0reverse_frame_2 - 0.029 14.6 0.0 0.033 14.4 0.0 1.3 1 1 0 1 1 1 0 Nse4 C-terminal DUF3778 PF12620.8 NODE_72937_length_216_cov_2.646409_g64996_i0forward_frame_2 - 0.097 12.3 0.1 0.14 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3778) Glyco_transf_20 PF00982.21 NODE_72934_length_216_cov_2.662983_g64993_i0reverse_frame_2 - 6.1e-11 41.7 0.0 6.4e-11 41.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 EppA_BapA PF07268.11 NODE_72934_length_216_cov_2.662983_g64993_i0forward_frame_3 - 0.13 12.2 0.0 0.22 11.5 0.0 1.4 1 1 1 2 2 2 0 Exported protein precursor (EppA/BapA) HTH_24 PF13412.6 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 5.8e-09 35.4 0.8 8.1e-09 34.9 0.8 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.00017 21.4 0.1 0.00027 20.8 0.0 1.4 2 0 0 2 2 2 1 MarR family HTH_AsnC-type PF13404.6 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.00025 20.8 0.4 0.00047 19.9 0.4 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.00044 19.7 0.1 0.00065 19.2 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_11 PF08279.12 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.0018 18.2 0.4 0.0023 17.8 0.4 1.2 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.012 15.5 0.1 0.016 15.1 0.1 1.3 1 0 0 1 1 1 0 MarR family Arg_repressor PF01316.21 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.014 15.1 0.6 0.017 14.9 0.6 1.2 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain HTH_5 PF01022.20 NODE_72933_length_216_cov_2.674033_g64992_i0forward_frame_2 - 0.083 12.8 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family LacI PF00356.21 NODE_72929_length_216_cov_2.878453_g64988_i0reverse_frame_2 - 0.07 12.9 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family DUF4050 PF13259.6 NODE_72928_length_216_cov_2.889503_g64987_i0reverse_frame_3 - 0.25 11.7 0.6 0.29 11.4 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) C5HCH PF17982.1 NODE_72925_length_216_cov_2.911602_g64984_i0forward_frame_3 - 0.15 12.3 2.7 0.26 11.5 2.7 1.4 1 0 0 1 1 1 0 NSD Cys-His rich domain HATPase_c PF02518.26 NODE_72924_length_216_cov_2.977901_g64983_i0forward_frame_3 - 6.2e-07 29.9 0.0 7.3e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thermopsin PF05317.11 NODE_72923_length_216_cov_2.983425_g64982_i0reverse_frame_2 - 0.016 14.7 0.1 0.016 14.7 0.1 1.1 1 0 0 1 1 1 0 Thermopsin Usher PF00577.20 NODE_72921_length_216_cov_3.138122_g64980_i0reverse_frame_3 - 3.5e-17 62.5 0.3 3.5e-17 62.5 0.3 1.0 1 0 0 1 1 1 1 Outer membrane usher protein DUF3929 PF13066.6 NODE_72920_length_216_cov_3.138122_g64979_i0reverse_frame_3 - 0.28 11.3 0.6 2 8.5 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3929) SUV3_C PF12513.8 NODE_72919_length_216_cov_3.143646_g64978_i0forward_frame_2 - 0.078 12.9 0.8 0.29 11.1 0.2 2.1 2 0 0 2 2 2 0 Mitochondrial degradasome RNA helicase subunit C terminal TPP_enzyme_M PF00205.22 NODE_72918_length_216_cov_3.149171_g64977_i0forward_frame_2 - 7.2e-07 29.0 0.4 9.1e-07 28.7 0.4 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain CO_dh PF02552.16 NODE_72918_length_216_cov_3.149171_g64977_i0forward_frame_2 - 0.026 14.3 0.1 0.027 14.2 0.1 1.1 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit DUF3199 PF11436.8 NODE_72917_length_216_cov_3.165746_g64976_i0reverse_frame_2 - 0.018 15.1 0.1 0.02 14.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3199) Pox_A32 PF04665.12 NODE_72916_length_216_cov_3.270718_g64975_i0forward_frame_2 - 0.00061 19.3 0.1 0.00064 19.3 0.1 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein CENP-B_dimeris PF09026.10 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_3 - 0.085 13.2 4.3 0.086 13.2 4.3 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain Ferlin_C PF16165.5 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_3 - 0.15 12.0 1.0 0.16 11.9 1.0 1.1 1 0 0 1 1 1 0 Ferlin C-terminus DNA_pol_phi PF04931.13 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_3 - 0.74 7.8 6.2 0.68 8.0 6.2 1.0 1 0 0 1 1 1 0 DNA polymerase phi Cytomega_UL84 PF06284.11 NODE_72915_length_216_cov_3.325967_g64974_i0reverse_frame_3 - 5.7 5.3 4.9 6.1 5.2 4.9 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein SH PF01445.17 NODE_72915_length_216_cov_3.325967_g64974_i0forward_frame_3 - 0.018 15.0 0.4 0.029 14.3 0.4 1.3 1 0 0 1 1 1 0 Viral small hydrophobic protein DUF2207 PF09972.9 NODE_72915_length_216_cov_3.325967_g64974_i0forward_frame_2 - 0.51 9.0 3.8 0.49 9.1 3.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) UL45 PF05473.12 NODE_72915_length_216_cov_3.325967_g64974_i0forward_frame_2 - 1.4 8.5 3.0 1.5 8.4 3.0 1.0 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like Ly49 PF08391.10 NODE_72911_length_216_cov_6.950276_g64970_i0reverse_frame_2 - 2.2 8.7 6.1 2.3 8.6 6.1 1.1 1 0 0 1 1 1 0 Ly49-like protein, N-terminal region ArfGap PF01412.18 NODE_72905_length_216_cov_29.204420_g64964_i0forward_frame_3 - 0.081 13.0 1.1 0.091 12.8 1.1 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf DUF1156 PF06634.12 NODE_72901_length_216_cov_32.209945_g64960_i0reverse_frame_2 - 6.9e-05 22.9 0.6 8.5e-05 22.6 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1156) AIM3 PF17096.5 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 0.23 12.4 9.2 0.28 12.2 9.2 1.2 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 RNA_polI_A34 PF08208.11 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 0.27 11.3 12.2 0.27 11.3 12.2 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF3824 PF12868.7 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 0.53 10.9 11.2 0.74 10.5 11.2 1.3 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) DUF4834 PF16118.5 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 2.6 9.1 9.1 2.8 9.0 9.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Cytomega_UL84 PF06284.11 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 4.1 5.7 7.9 4.5 5.6 7.9 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein UPF0239 PF06783.11 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 5.3 7.3 10.0 6.8 6.9 10.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Coilin_N PF15862.5 NODE_72898_length_216_cov_34.756906_g64957_i0reverse_frame_2 - 7.5 6.4 14.3 7.8 6.3 14.3 1.1 1 0 0 1 1 1 0 Coilin N-terminus DUF1281 PF06924.11 NODE_72897_length_216_cov_35.138122_g64956_i0forward_frame_2 - 0.078 12.5 0.0 0.094 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) BDV_G PF06208.11 NODE_72896_length_216_cov_37.381215_g64955_i0forward_frame_2 - 0.099 11.8 0.0 0.099 11.8 0.0 1.0 1 0 0 1 1 1 0 Borna disease virus G protein VKG_Carbox PF05090.14 NODE_72893_length_216_cov_42.679558_g64952_i0reverse_frame_2 - 0.048 12.5 0.1 0.049 12.5 0.1 1.0 1 0 0 1 1 1 0 Vitamin K-dependent gamma-carboxylase DUF4514 PF14986.6 NODE_72893_length_216_cov_42.679558_g64952_i0forward_frame_2 - 0.054 13.5 3.0 0.06 13.3 2.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4514) Ank_4 PF13637.6 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 3.3e-09 37.1 0.1 2.5e-05 24.7 0.0 1.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 6.2e-08 32.8 0.0 7.9e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 0.00041 20.9 0.0 0.0005 20.6 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 0.0034 17.7 0.0 0.0058 17.0 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeat Ank PF00023.30 NODE_72890_length_216_cov_47.508287_g64949_i0forward_frame_3 - 0.0087 16.5 0.0 0.017 15.6 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeat POT1 PF02765.17 NODE_72888_length_216_cov_48.729282_g64947_i0reverse_frame_3 - 0.028 14.3 0.2 0.034 14.0 0.2 1.1 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 Dynein_C PF18199.1 NODE_72886_length_216_cov_48.961326_g64945_i0reverse_frame_2 - 0.0035 16.6 0.0 0.0037 16.5 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain Vhr1 PF04001.13 NODE_72883_length_216_cov_52.392265_g64942_i0reverse_frame_2 - 0.016 15.5 0.2 0.017 15.4 0.2 1.1 1 0 0 1 1 1 0 Transcription factor Vhr1 DevR PF01905.16 NODE_72883_length_216_cov_52.392265_g64942_i0forward_frame_2 - 0.17 11.0 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated negative auto-regulator DevR/Csa2 InaF-motif PF15018.6 NODE_72882_length_216_cov_53.016575_g64941_i0reverse_frame_3 - 0.042 13.7 1.2 0.042 13.7 1.2 1.6 2 0 0 2 2 2 0 TRP-interacting helix Prp18 PF02840.15 NODE_72882_length_216_cov_53.016575_g64941_i0forward_frame_3 - 2.1e-20 73.2 0.1 2.6e-20 72.9 0.1 1.0 1 0 0 1 1 1 1 Prp18 domain Pectinesterase PF01095.19 NODE_72881_length_216_cov_53.320442_g64940_i0reverse_frame_3 - 0.052 12.3 1.0 0.059 12.1 1.0 1.1 1 0 0 1 1 1 0 Pectinesterase YceG_bac PF14266.6 NODE_72872_length_216_cov_62.911602_g64931_i0reverse_frame_2 - 0.12 11.3 0.0 0.14 11.0 0.0 1.0 1 0 0 1 1 1 0 Putative component of 'biosynthetic module' FYTT PF07078.11 NODE_72870_length_216_cov_66.662983_g64929_i0forward_frame_2 - 0.089 12.1 0.1 0.089 12.1 0.1 1.1 1 0 0 1 1 1 0 Forty-two-three protein DUF2854 PF11016.8 NODE_72864_length_216_cov_80.762431_g64923_i0reverse_frame_3 - 0.25 11.2 0.0 3.8 7.4 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2854) DUF678 PF05077.12 NODE_72864_length_216_cov_80.762431_g64923_i0forward_frame_3 - 0.086 13.0 5.2 0.19 11.9 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF678) IpaB_EvcA PF03278.13 NODE_72862_length_216_cov_86.303867_g64921_i0reverse_frame_3 - 0.042 13.6 0.1 0.22 11.2 0.1 1.9 1 1 0 1 1 1 0 IpaB/EvcA family TypeIII_RM_meth PF12564.8 NODE_72862_length_216_cov_86.303867_g64921_i0forward_frame_2 - 2.1 8.5 6.3 0.26 11.4 1.1 2.1 2 1 1 3 3 3 0 Type III restriction/modification enzyme methylation subunit Varsurf_PPLC PF03490.13 NODE_72859_length_216_cov_89.132597_g64918_i0forward_frame_2 - 0.01 15.7 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C MID_MedPIWI PF18296.1 NODE_72859_length_216_cov_89.132597_g64918_i0forward_frame_2 - 0.066 13.0 0.2 0.077 12.8 0.2 1.0 1 0 0 1 1 1 0 MID domain of medPIWI Ribosomal_L15e PF00827.17 NODE_72857_length_216_cov_96.237569_g64916_i0forward_frame_2 - 1.6e-08 34.5 2.7 2.8e-08 33.7 2.7 1.3 1 0 0 1 1 1 1 Ribosomal L15 NT-C2 PF10358.9 NODE_72856_length_216_cov_115.066298_g64915_i0reverse_frame_3 - 0.018 14.8 0.6 0.021 14.5 0.6 1.1 1 0 0 1 1 1 0 N-terminal C2 in EEIG1 and EHBP1 proteins MSSP PF03940.13 NODE_72856_length_216_cov_115.066298_g64915_i0reverse_frame_2 - 0.1 12.2 10.0 0.14 11.8 10.0 1.2 1 0 0 1 1 1 0 Male specific sperm protein Thioredoxin_6 PF13848.6 NODE_72852_length_216_cov_132.342541_g64911_i0reverse_frame_2 - 0.044 13.7 0.0 0.048 13.6 0.0 1.0 1 0 0 1 1 1 0 Thioredoxin-like domain PAS_11 PF14598.6 NODE_72849_length_216_cov_145.348066_g64908_i0reverse_frame_2 - 0.07 13.3 0.5 0.079 13.1 0.5 1.0 1 0 0 1 1 1 0 PAS domain SR-25 PF10500.9 NODE_72844_length_216_cov_181.220994_g64903_i0forward_frame_2 - 0.51 9.9 10.6 0.57 9.7 10.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein PSII PF00421.19 NODE_72843_length_216_cov_183.270718_g64902_i0reverse_frame_3 - 3.7e-05 22.6 0.0 4.6e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Photosystem II protein E_raikovi_mat PF06360.11 NODE_72842_length_216_cov_187.861878_g64901_i0reverse_frame_2 - 3.7 8.0 8.0 0.15 12.5 2.1 1.8 2 1 0 2 2 2 0 Euplotes raikovi mating pheromone SLATT_2 PF18183.1 NODE_72841_length_216_cov_223.497238_g64900_i0reverse_frame_3 - 0.065 13.0 0.1 0.099 12.4 0.1 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 2 NinE PF05322.11 NODE_72838_length_216_cov_282.243094_g64897_i0reverse_frame_3 - 0.012 15.5 0.7 0.02 14.8 0.7 1.4 1 0 0 1 1 1 0 NINE Protein APC_u5 PF16630.5 NODE_72838_length_216_cov_282.243094_g64897_i0reverse_frame_2 - 0.0021 19.0 0.5 0.0024 18.9 0.5 1.1 1 0 0 1 1 1 1 Unstructured region on APC between 1st and 2nd catenin-bdg motifs Amastin PF07344.11 NODE_72838_length_216_cov_282.243094_g64897_i0reverse_frame_2 - 4 7.3 4.2 10 5.9 1.5 1.9 1 1 1 2 2 2 0 Amastin surface glycoprotein DUF5553 PF17707.1 NODE_72837_length_216_cov_282.309392_g64896_i0reverse_frame_3 - 0.026 14.0 0.2 0.026 14.0 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5553) zf-C3HC4_4 PF15227.6 NODE_72836_length_216_cov_450.856354_g64895_i0reverse_frame_2 - 0.24 11.6 7.0 0.36 11.0 6.7 1.5 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C2H2 PF00096.26 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 2.2e-06 27.8 2.1 2.2e-06 27.8 2.1 2.3 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.00088 19.9 0.9 0.00088 19.9 0.9 2.3 3 0 0 3 3 3 1 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.0018 18.6 3.7 0.02 15.3 0.7 2.2 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_jaz PF12171.8 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.0045 17.2 3.3 0.0045 17.2 3.3 2.5 2 1 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.0048 17.2 3.0 0.0071 16.7 0.7 2.3 2 0 0 2 2 2 1 Zinc-finger of C2H2 type FOXP-CC PF16159.5 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.0088 16.6 1.1 0.0097 16.5 0.7 1.4 1 1 0 1 1 1 1 FOXP coiled-coil domain Zn-ribbon_8 PF09723.10 NODE_72836_length_216_cov_450.856354_g64895_i0forward_frame_2 - 0.013 15.6 0.6 0.021 14.9 0.6 1.4 1 0 0 1 1 1 0 Zinc ribbon domain DUF2650 PF10853.8 NODE_72830_length_216_cov_595.033149_g64889_i0reverse_frame_3 - 0.034 13.9 3.7 0.047 13.4 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) DDHD PF02862.17 NODE_72829_length_216_cov_595.370166_g64888_i0reverse_frame_3 - 0.05 13.8 0.0 0.05 13.8 0.0 1.0 1 0 0 1 1 1 0 DDHD domain PPDFL PF15060.6 NODE_72829_length_216_cov_595.370166_g64888_i0reverse_frame_2 - 0.077 13.5 0.0 0.085 13.4 0.0 1.1 1 0 0 1 1 1 0 Differentiation and proliferation regulator Sortilin-Vps10 PF15902.5 NODE_72827_length_216_cov_1262.856354_g64886_i0forward_frame_3 - 0.075 11.8 1.5 0.089 11.6 1.5 1.0 1 0 0 1 1 1 0 Sortilin, neurotensin receptor 3, Asp_Arg_Hydrox PF05118.15 NODE_72826_length_216_cov_85293.712707_g64885_i0reverse_frame_2 - 0.11 12.3 0.1 0.11 12.3 0.1 1.1 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase ZF-HD_dimer PF04770.12 NODE_72826_length_216_cov_85293.712707_g64885_i0forward_frame_2 - 0.082 13.3 2.4 0.13 12.7 2.4 1.2 1 0 0 1 1 1 0 ZF-HD protein dimerisation region AZUL PF16558.5 ORF99771 - 4.1 7.7 9.6 11 6.4 9.6 1.8 1 1 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A DUF3530 PF12048.8 ORF9962 - 0.076 12.4 0.4 0.077 12.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Surfac_D-trimer PF09006.11 ORF99393 - 0.023 14.6 0.1 0.039 13.8 0.1 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation RRM_1 PF00076.22 ORF99301 - 0.0062 16.3 0.0 0.0075 16.1 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Attachment_P66 PF11263.8 ORF99089 - 0.1 11.8 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi attachment protein P66 Requiem_N PF14051.6 ORF99054 - 1.5 9.0 7.2 6.2 7.1 0.9 2.4 1 1 1 2 2 2 0 N-terminal domain of DPF2/REQ. UPF0228 PF05727.11 ORF98943 - 0.0094 15.8 1.2 0.01 15.7 1.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) CxC1 PF18802.1 ORF98224 - 0.052 13.7 0.3 0.056 13.6 0.3 1.2 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases GLE1 PF07817.13 ORF98215 - 0.1 11.8 0.1 0.1 11.8 0.1 1.1 1 0 0 1 1 1 0 GLE1-like protein L71 PF02448.15 ORF98052 - 0.11 12.9 1.6 0.14 12.6 1.6 1.2 1 0 0 1 1 1 0 L71 family PPTA PF01239.22 ORF9798 - 0.036 13.8 2.3 0.79 9.5 0.4 2.6 3 0 0 3 3 3 0 Protein prenyltransferase alpha subunit repeat CTV_P33 PF07184.11 ORF9798 - 0.26 10.3 2.1 0.31 10.0 2.1 1.0 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein IR1-M PF12185.8 ORF96983 - 0.034 14.1 0.2 0.056 13.4 0.2 1.5 1 0 0 1 1 1 0 Nup358/RanBP2 E3 ligase domain DUF3942 PF13078.6 ORF96930 - 0.029 14.7 0.2 0.032 14.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3942) DUF3225 PF11533.8 ORF96930 - 0.054 13.2 0.0 0.054 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3225) DUF4576 PF15144.6 ORF96925 - 0.1 12.5 0.2 0.16 11.9 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4576) HCV_NS5a PF01506.19 ORF9677 - 1.8 8.5 5.0 2 8.4 0.3 2.9 3 0 0 3 3 3 0 Hepatitis C virus non-structural 5a protein membrane anchor DUF1231 PF06802.11 ORF96082 - 0.015 14.4 0.1 0.017 14.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1231) ITAM_Cys-rich PF10538.9 ORF96082 - 0.066 13.0 1.0 0.11 12.3 1.0 1.3 1 0 0 1 1 1 0 Immunoreceptor tyrosine-based activation motif Peptidase_M16_M PF16187.5 ORF95926 - 0.026 13.8 0.3 0.027 13.8 0.3 1.0 1 0 0 1 1 1 0 Middle or third domain of peptidase_M16 ATP-synt_B PF00430.18 ORF95926 - 0.029 14.4 0.2 0.035 14.2 0.2 1.1 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) PqqA PF08042.11 ORF95191 - 0.27 11.3 1.1 1.9 8.7 0.5 2.1 2 0 0 2 2 2 0 PqqA family APOBEC1 PF18769.1 ORF9485 - 0.062 13.6 0.4 0.076 13.3 0.4 1.1 1 0 0 1 1 1 0 APOBEC1 DUF2559 PF10832.8 ORF94635 - 0.031 14.4 1.5 0.4 10.8 1.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2559) UPF0203 PF05254.12 ORF94240 - 0.029 14.6 0.3 0.035 14.3 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF5560 PF17715.1 ORF94095 - 0.27 10.6 2.0 0.32 10.4 2.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5560) DUF910 PF06014.11 ORF93733 - 0.03 14.3 0.2 0.078 13.0 0.1 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF910) EF-hand_1 PF00036.32 ORF91848 - 8.2e-18 62.6 1.4 3.7e-08 32.4 0.2 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF91848 - 1.8e-15 57.1 0.8 2e-15 57.0 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF91848 - 1.1e-14 53.2 1.2 1.3e-06 27.6 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF91848 - 5.1e-14 50.9 0.6 8.2e-08 31.6 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF91848 - 3.8e-13 49.1 2.6 6.1e-08 32.4 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF91848 - 0.00022 21.5 0.1 0.00029 21.1 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF91848 - 0.00049 20.4 0.3 0.00053 20.3 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF91848 - 0.0024 18.7 0.0 0.0028 18.5 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF91848 - 0.013 15.5 0.4 0.026 14.5 0.4 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 ORF91848 - 0.033 14.4 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 ORF91848 - 0.066 11.7 0.0 0.074 11.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 ORF91848 - 0.075 12.9 0.6 0.45 10.4 0.3 2.1 2 0 0 2 2 2 0 EF hand Phage_int_SAM_4 PF13495.6 ORF91186 - 0.057 13.9 0.0 0.059 13.9 0.0 1.1 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Aldedh PF00171.22 ORF90405 - 8.5e-13 47.6 0.0 9.4e-13 47.5 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family ShK PF01549.24 ORF90405 - 0.11 13.1 0.1 0.14 12.7 0.1 1.2 1 0 0 1 1 1 0 ShK domain-like DUF630 PF04783.12 ORF90186 - 0.011 15.9 0.0 0.14 12.3 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF630) Sigma54_DBD PF04552.13 ORF90186 - 0.033 13.9 0.1 0.035 13.8 0.1 1.1 1 0 0 1 1 1 0 Sigma-54, DNA binding domain RWP-RK PF02042.15 ORF90186 - 0.036 14.0 0.2 0.06 13.3 0.1 1.4 1 1 0 1 1 1 0 RWP-RK domain PPTA PF01239.22 ORF89495 - 0.036 13.8 2.3 0.79 9.5 0.4 2.6 3 0 0 3 3 3 0 Protein prenyltransferase alpha subunit repeat CTV_P33 PF07184.11 ORF89495 - 0.26 10.3 2.1 0.31 10.0 2.1 1.0 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein EF-hand_1 PF00036.32 ORF8939 - 8.2e-18 62.6 1.4 3.7e-08 32.4 0.2 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF8939 - 1.8e-15 57.1 0.8 2e-15 57.0 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF8939 - 1.1e-14 53.2 1.2 1.3e-06 27.6 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF8939 - 5.1e-14 50.9 0.6 8.2e-08 31.6 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF8939 - 3.8e-13 49.1 2.6 6.1e-08 32.4 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF8939 - 0.00022 21.5 0.1 0.00029 21.1 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF8939 - 0.00049 20.4 0.3 0.00053 20.3 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF8939 - 0.0024 18.7 0.0 0.0028 18.5 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF8939 - 0.013 15.5 0.4 0.026 14.5 0.4 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 ORF8939 - 0.033 14.4 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 ORF8939 - 0.066 11.7 0.0 0.074 11.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 ORF8939 - 0.075 12.9 0.6 0.45 10.4 0.3 2.1 2 0 0 2 2 2 0 EF hand DUF3267 PF11667.8 ORF89284 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF89284 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region zf-CCHC_6 PF15288.6 ORF88437 - 0.022 14.6 2.7 0.04 13.8 1.5 1.9 1 1 1 2 2 2 0 Zinc knuckle Nab6_mRNP_bdg PF10567.9 ORF88253 - 0.039 13.5 0.3 0.039 13.5 0.3 1.0 1 0 0 1 1 1 0 RNA-recognition motif DUF1420 PF07220.11 ORF87242 - 0.027 13.1 0.1 0.03 12.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1420) Zn_clus PF00172.18 ORF87074 - 0.077 13.1 1.3 0.11 12.7 0.3 1.8 2 0 0 2 2 2 0 Fungal Zn(2)-Cys(6) binuclear cluster domain MCR_alpha_N PF02745.15 ORF8702 - 0.055 12.8 0.2 0.065 12.6 0.2 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, N-terminal domain Ala_racemase_N PF01168.20 ORF85203 - 1.3e-06 28.3 0.0 1.3e-06 28.3 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain VHL_C PF17211.3 ORF84394 - 0.017 15.1 0.0 0.026 14.5 0.0 1.3 1 0 0 1 1 1 0 VHL box domain DUF1505 PF07403.11 ORF84394 - 0.064 13.4 1.0 0.07 13.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) zf-CCHC_5 PF14787.6 ORF84394 - 0.15 11.8 7.8 0.31 10.8 7.8 1.6 1 0 0 1 1 1 0 GAG-polyprotein viral zinc-finger RapA_C PF12137.8 ORF84363 - 0.039 13.0 0.0 0.041 12.9 0.0 1.0 1 0 0 1 1 1 0 RNA polymerase recycling family C-terminal Methyltrn_RNA_3 PF02598.17 ORF84011 - 0.19 11.2 0.0 0.19 11.2 0.0 1.0 1 0 0 1 1 1 0 Putative RNA methyltransferase Telomere_res PF16684.5 ORF83873 - 0.17 11.3 0.1 0.18 11.3 0.1 1.1 1 0 0 1 1 1 0 Telomere resolvase EOS1 PF12326.8 ORF83297 - 0.083 12.8 0.0 0.14 12.1 0.0 1.5 1 1 0 1 1 1 0 N-glycosylation protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks382.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks382.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks382.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks382.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L34 PF00468.17 ORF82983 - 0.057 13.4 0.1 0.12 12.3 0.0 1.6 2 0 0 2 2 2 0 Ribosomal protein L34 Proteasom_Rpn13 PF04683.13 ORF82872 - 0.099 13.2 0.5 0.15 12.7 0.5 1.2 1 0 0 1 1 1 0 Proteasome complex subunit Rpn13 ubiquitin receptor MORN PF02493.20 ORF82178 - 1.9e-10 40.0 5.3 3.9e-06 26.4 0.6 2.6 3 0 0 3 3 3 2 MORN repeat DnaJ_CXXCXGXG PF00684.19 ORF82053 - 0.055 13.8 0.3 0.07 13.5 0.3 1.1 1 0 0 1 1 1 0 DnaJ central domain DUF1147 PF06615.11 ORF82053 - 0.17 12.0 2.0 0.38 10.8 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1147) CD36 PF01130.21 ORF80734 - 0.042 12.4 0.4 0.046 12.2 0.4 1.0 1 0 0 1 1 1 0 CD36 family DUF2207 PF09972.9 ORF80140 - 1 8.1 4.3 1 8.1 4.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4118 PF13493.6 ORF80026 - 0.015 15.1 1.7 0.015 15.0 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) OAD_gamma PF04277.13 ORF79911 - 0.0044 17.6 3.2 0.0044 17.6 3.2 1.4 1 1 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain DUF4995 PF16386.5 ORF79911 - 0.11 12.5 0.6 0.13 12.2 0.6 1.4 1 1 0 1 1 1 0 Domain of unknown function CcmF_C PF16327.5 ORF79911 - 0.28 10.4 5.6 0.32 10.2 5.6 1.0 1 0 0 1 1 1 0 Cytochrome c-type biogenesis protein CcmF C-terminal HemY_N PF07219.13 ORF79911 - 1.4 9.2 7.2 2.1 8.6 7.2 1.4 1 1 0 1 1 1 0 HemY protein N-terminus Shisa PF13908.6 ORF79911 - 1.7 8.8 5.7 1.7 8.8 5.7 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator EBA-175_VI PF11556.8 ORF79188 - 0.084 13.2 2.3 0.13 12.6 2.3 1.4 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 Basic PF01586.16 ORF78869 - 2.5 9.3 9.9 3.1 9.1 9.9 1.3 1 1 0 1 1 1 0 Myogenic Basic domain ATP-synt_Eps PF04627.13 ORF78820 - 0.11 12.4 1.0 0.16 12.0 1.0 1.4 1 1 0 1 1 1 0 Mitochondrial ATP synthase epsilon chain NETI PF14044.6 ORF78814 - 1.7 8.5 3.7 2.9 7.7 0.5 2.2 1 1 1 2 2 2 0 NETI protein UL11 PF11094.8 ORF78085 - 0.14 12.1 0.8 0.14 12.1 0.8 2.2 2 1 0 2 2 2 0 Membrane-associated tegument protein DUF600 PF04634.12 ORF77818 - 0.02 14.9 0.1 0.033 14.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function, DUF600 Peptidase_M41 PF01434.18 ORF77773 - 0.12 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M41 Ribosomal_L37e PF01907.19 ORF7742 - 0.016 15.3 0.6 0.026 14.7 0.6 1.4 1 0 0 1 1 1 0 Ribosomal protein L37e IBD PF10416.9 ORF77303 - 0.018 15.1 0.3 0.027 14.5 0.2 1.3 1 1 0 1 1 1 0 Transcription-initiator DNA-binding domain IBD DUF761 PF05553.11 ORF77209 - 0.15 11.6 0.7 0.31 10.6 0.7 1.4 1 0 0 1 1 1 0 Cotton fibre expressed protein C6_DPF PF10170.9 ORF76933 - 0.044 14.1 0.8 0.044 14.1 0.8 1.4 1 1 0 1 1 1 0 Cysteine-rich domain MTCP1 PF08991.10 ORF76703 - 0.0023 18.1 1.2 0.0028 17.9 1.2 1.1 1 0 0 1 1 1 1 Mature-T-Cell Proliferation I type DUF2600 PF10776.9 ORF76703 - 0.042 12.7 0.1 0.046 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2600) RIC3 PF15361.6 ORF76701 - 0.22 11.9 0.0 0.24 11.8 0.0 1.0 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 P_proprotein PF01483.20 ORF76432 - 0.076 13.1 0.1 0.15 12.1 0.0 1.5 1 1 0 1 1 1 0 Proprotein convertase P-domain Peptidase_M41 PF01434.18 ORF76397 - 0.12 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M41 Fe_hyd_SSU PF02256.17 ORF75365 - 0.13 12.4 0.5 0.16 12.1 0.5 1.5 1 1 0 1 1 1 0 Iron hydrogenase small subunit LPD24 PF18839.1 ORF75365 - 0.14 12.4 0.0 0.22 11.8 0.0 1.3 1 0 0 1 1 1 0 Large polyvalent protein associated domain 24 DUF3885 PF13021.6 ORF75365 - 0.17 12.0 0.1 0.3 11.2 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3885) NAD_binding_1 PF00175.21 ORF74623 - 0.078 13.6 0.0 0.15 12.7 0.0 1.5 2 0 0 2 2 2 0 Oxidoreductase NAD-binding domain DNA_pol3_a_NII PF11490.8 ORF74362 - 0.25 11.2 1.2 0.3 11.0 1.2 1.2 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II XylR_N PF06505.11 ORF74260 - 0.11 12.2 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Activator of aromatic catabolism DUF1518 PF07469.12 ORF73865 - 0.025 15.0 4.8 0.34 11.3 4.8 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF1518) zf-CGNR PF11706.8 ORF73478 - 0.083 12.8 0.2 0.14 12.1 0.2 1.3 1 0 0 1 1 1 0 CGNR zinc finger DUF2541 PF10807.8 ORF73085 - 0.039 14.0 0.0 0.042 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2541) TMIE PF16038.5 ORF72387 - 0.074 12.9 1.8 0.11 12.4 1.8 1.2 1 0 0 1 1 1 0 TMIE protein Pedibin PF08182.11 ORF72370 - 0.014 15.2 0.0 2.7 7.9 0.0 2.1 2 0 0 2 2 2 0 Pedibin/Hym-346 family DUF4418 PF14387.6 ORF71948 - 0.028 14.6 1.5 0.031 14.5 1.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4418) Waikav_capsid_1 PF12264.8 ORF71086 - 0.048 13.2 0.1 0.049 13.1 0.1 1.0 1 0 0 1 1 1 0 Waikavirus capsid protein 1 DUF4283 PF14111.6 ORF71086 - 0.062 12.8 0.1 0.068 12.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4283) DDE_Tnp_1_6 PF13751.6 ORF70939 - 0.092 13.0 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Transposase DDE domain DUF5316 PF17247.2 ORF70736 - 0.047 13.7 0.4 0.084 12.9 0.3 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5316) DUF4239 PF14023.6 ORF70259 - 0.56 9.9 5.3 0.62 9.7 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) Adipogenin PF15202.6 ORF70259 - 7.5 6.7 8.5 10 6.2 8.5 1.5 1 1 0 1 1 1 0 Adipogenin GCHY-1 PF02649.14 ORF70031 - 0.11 12.0 0.4 0.11 12.0 0.4 1.0 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 DUF3719 PF12516.8 ORF70031 - 0.11 12.2 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) PRIMA1 PF16101.5 ORF69676 - 2.7 8.1 5.6 3.2 7.8 5.6 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 DUF3267 PF11667.8 ORF68602 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF68602 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Flu_C_NS2 PF03555.14 ORF68068 - 0.23 11.7 0.7 8.2 6.7 0.0 2.1 2 0 0 2 2 2 0 Influenza C non-structural protein (NS2) DUF1700 PF08006.11 ORF6769 - 0.06 12.9 2.7 0.06 12.9 2.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) TrbL PF04610.14 ORF67476 - 0.12 12.1 9.9 0.14 11.9 9.9 1.0 1 0 0 1 1 1 0 TrbL/VirB6 plasmid conjugal transfer protein Ank_2 PF12796.7 ORF67439 - 1.4e-13 51.2 0.0 1.5e-13 51.1 0.0 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF67439 - 3.6e-13 48.4 0.1 1.8e-07 30.9 0.1 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF67439 - 2.3e-10 40.5 0.0 1.4e-05 25.3 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF67439 - 3.2e-10 40.0 0.0 7e-05 23.1 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF67439 - 2.4e-09 37.6 0.1 6e-09 36.3 0.1 1.7 1 1 0 1 1 1 1 Ankyrin repeats (many copies) SSI PF00720.17 ORF66931 - 0.012 15.5 1.0 0.016 15.2 1.0 1.3 1 0 0 1 1 1 0 Subtilisin inhibitor-like Lenti_VIF_2 PF07401.12 ORF66005 - 0.055 12.8 0.4 0.055 12.8 0.4 1.9 1 1 0 2 2 2 0 Bovine Lentivirus VIF protein PetG PF02529.15 ORF65566 - 0.15 11.9 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit 5 DUF5001 PF16392.5 ORF6480 - 0.06 13.3 0.1 0.062 13.2 0.1 1.2 1 0 0 1 1 1 0 Ig-like domain Fun_ATP-synt_8 PF05933.13 ORF63058 - 0.028 14.6 0.9 0.051 13.7 0.7 1.6 1 1 0 1 1 1 0 Fungal ATP synthase protein 8 (A6L) DUF3927 PF13064.6 ORF62745 - 0.32 11.0 0.1 0.32 11.0 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3927) DUF1235 PF06822.12 ORF62491 - 0.023 14.0 0.1 0.024 13.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1235) FlbD PF06289.11 ORF62491 - 0.082 12.5 0.1 0.25 11.0 0.0 1.8 1 1 1 2 2 2 0 Flagellar and Swarming motility proteins DUF751 PF05421.11 ORF62166 - 0.018 15.8 3.2 0.028 15.1 2.8 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF751) EIID-AGA PF03613.14 ORF62166 - 0.44 9.7 6.7 0.47 9.6 6.7 1.0 1 0 0 1 1 1 0 PTS system mannose/fructose/sorbose family IID component DUF3944 PF13099.6 ORF61552 - 0.18 11.7 1.1 0.27 11.1 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3944) DUF3145 PF11343.8 ORF60463 - 0.13 11.8 0.0 0.14 11.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3145) CENP-N PF05238.13 ORF59312 - 0.1 11.9 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Fz PF01392.22 ORF59057 - 0.056 14.1 0.2 0.059 14.0 0.2 1.1 1 0 0 1 1 1 0 Fz domain DUF3267 PF11667.8 ORF58768 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF58768 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Levi_coat PF01819.17 ORF58388 - 0.088 12.8 0.1 0.092 12.8 0.1 1.0 1 0 0 1 1 1 0 Levivirus coat protein DM4_12 PF07841.13 ORF57488 - 0.066 13.9 0.0 0.066 13.9 0.0 1.1 1 0 0 1 1 1 0 DM4/DM12 family PD-C2-AF1 PF09310.10 ORF56843 - 0.11 11.8 0.1 0.27 10.6 0.0 1.6 1 1 1 2 2 2 0 POU domain, class 2, associating factor 1 Imm53 PF15580.6 ORF5665 - 0.013 15.2 0.2 0.016 14.9 0.2 1.1 1 0 0 1 1 1 0 Immunity protein 53 Corona_NS3b PF03053.14 ORF56614 - 0.11 12.3 1.2 0.11 12.3 1.2 1.1 1 0 0 1 1 1 0 ORF3b coronavirus protein Nbas_N PF15492.6 ORF55733 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal GCR1_C PF12550.8 ORF54869 - 0.094 13.0 2.4 0.16 12.3 2.4 1.4 1 1 0 1 1 1 0 Transcriptional activator of glycolytic enzymes EF-hand_1 PF00036.32 ORF54695 - 1.1e-15 55.9 7.8 5.6e-08 31.8 1.4 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF54695 - 5.2e-15 55.7 0.8 5.8e-15 55.5 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF54695 - 8.1e-15 54.4 4.1 5.8e-11 42.1 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF54695 - 8.9e-13 47.1 3.6 1.4e-06 27.8 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF54695 - 2.5e-07 29.9 10.9 0.00022 20.6 1.0 2.8 2 1 1 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF54695 - 0.00027 21.3 0.3 0.00028 21.2 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF54695 - 0.0063 16.7 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Dockerin type I domain DUF1456 PF07308.13 ORF54695 - 0.0084 16.4 0.4 0.028 14.8 0.1 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1456) EF-hand_4 PF12763.7 ORF54695 - 0.012 15.5 0.3 0.017 15.1 0.3 1.3 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF54695 - 0.05 13.9 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain PMBR PF09373.10 ORF54695 - 0.062 13.5 0.0 8.1 6.8 0.0 2.6 3 0 0 3 3 3 0 Pseudomurein-binding repeat Nnf1 PF03980.14 ORF54695 - 0.11 12.8 0.1 0.16 12.4 0.1 1.3 1 0 0 1 1 1 0 Nnf1 CENP-N PF05238.13 ORF54021 - 0.1 11.9 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Sina PF03145.16 ORF52981 - 0.045 13.7 0.3 0.045 13.7 0.3 1.1 1 0 0 1 1 1 0 Seven in absentia protein family PSP1 PF04468.12 ORF52882 - 0.088 13.1 0.0 0.097 13.0 0.0 1.2 1 0 0 1 1 1 0 PSP1 C-terminal conserved region DUF4210 PF13915.6 ORF50871 - 0.046 14.3 0.0 0.077 13.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) PetG PF02529.15 ORF50428 - 0.15 11.9 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit 5 GCR1_C PF12550.8 ORF50203 - 0.094 13.0 2.4 0.16 12.3 2.4 1.4 1 1 0 1 1 1 0 Transcriptional activator of glycolytic enzymes BC10 PF06726.12 ORF49875 - 0.024 14.9 3.2 0.024 14.9 3.2 1.4 1 1 0 1 1 1 0 Bladder cancer-related protein BC10 DUF3177 PF11375.8 ORF49875 - 0.64 9.8 5.4 0.72 9.6 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3177) zf-C2H2 PF00096.26 ORF4967 - 4e-13 49.0 9.0 1.4e-06 28.4 3.6 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF4967 - 3.1e-10 40.0 7.7 0.00021 21.9 0.2 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF4967 - 3e-08 33.7 11.6 0.0005 20.4 0.7 2.9 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_6 PF13912.6 ORF4967 - 4.9e-05 23.2 9.6 6.1e-05 22.9 0.8 2.3 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF4967 - 0.00074 19.2 2.2 0.05 13.4 0.7 2.2 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF4967 - 0.0019 18.5 8.4 0.1 12.9 0.7 2.4 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF4967 - 0.0048 17.2 3.7 1.8 9.0 0.1 2.3 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-H2C2_5 PF13909.6 ORF4967 - 0.0063 16.2 2.6 0.0063 16.2 2.6 2.9 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-BED PF02892.15 ORF4967 - 0.014 15.4 7.4 1 9.5 2.4 2.2 1 1 1 2 2 2 0 BED zinc finger Ribosomal_L28 PF00830.19 ORF4967 - 0.017 15.3 2.4 0.23 11.7 0.1 2.1 1 1 1 2 2 2 0 Ribosomal L28 family TBPIP PF07106.13 ORF4967 - 0.023 14.6 0.0 0.028 14.3 0.0 1.2 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain zf-C2H2_3rep PF18868.1 ORF4967 - 0.026 15.2 1.4 1.7 9.4 0.1 1.9 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats Zn_Tnp_IS1595 PF12760.7 ORF4967 - 0.043 13.8 1.9 0.55 10.3 0.1 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain C1_2 PF03107.16 ORF4967 - 0.043 14.2 5.6 0.11 12.9 0.3 2.8 3 0 0 3 3 3 0 C1 domain Desulfoferrod_N PF06397.12 ORF4967 - 0.043 13.4 3.8 2.2 7.9 0.3 2.3 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-Di19 PF05605.12 ORF4967 - 0.045 14.1 5.0 0.63 10.4 5.2 2.0 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding FYVE PF01363.21 ORF4967 - 0.12 12.6 2.7 0.19 11.9 2.7 1.4 1 1 0 1 1 1 0 FYVE zinc finger PyrI_C PF02748.15 ORF4967 - 0.22 11.4 3.1 5.2 7.1 0.4 2.2 2 0 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-AN1 PF01428.16 ORF4967 - 2.9 8.1 8.8 7.1 6.9 1.4 2.6 1 1 1 2 2 2 0 AN1-like Zinc finger DUF4764 PF15961.5 ORF4967 - 5.2 5.6 8.0 6.9 5.2 1.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4764) Ecm29 PF13001.7 ORF49239 - 0.035 12.8 0.4 0.04 12.6 0.4 1.0 1 0 0 1 1 1 0 Proteasome stabiliser zf-CCHC_5 PF14787.6 ORF4798 - 0.0042 16.8 1.1 0.014 15.1 0.4 2.0 2 0 0 2 2 2 1 GAG-polyprotein viral zinc-finger GLE1 PF07817.13 ORF47205 - 0.1 11.8 0.1 0.1 11.8 0.1 1.1 1 0 0 1 1 1 0 GLE1-like protein SLS PF14611.6 ORF47159 - 0.012 15.5 0.1 0.013 15.3 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial inner-membrane-bound regulator DUF1736 PF08409.11 ORF46912 - 0.044 13.8 0.0 0.061 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1736) TraG_N PF07916.11 ORF46644 - 1.2 7.9 10.1 1.4 7.7 10.1 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region Ras PF00071.22 ORF45963 - 0.00028 20.5 0.1 0.00036 20.2 0.1 1.2 1 0 0 1 1 1 1 Ras family DUF3530 PF12048.8 ORF45508 - 0.076 12.4 0.4 0.077 12.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Feld-I_B PF09252.10 ORF45134 - 0.0094 15.9 0.1 0.014 15.3 0.1 1.3 1 0 0 1 1 1 1 Allergen Fel d I-B chain DUF1075 PF06388.11 ORF4506 - 0.075 13.1 0.1 0.082 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1075) 7TM_GPCR_Srbc PF10316.9 ORF44628 - 0.075 12.5 3.3 0.095 12.2 3.3 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srbc DUF2179 PF10035.9 ORF44455 - 0.16 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) DUF3871 PF12987.7 ORF44090 - 0.015 14.1 1.6 0.016 14.1 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3871) DM PF00751.18 ORF44090 - 0.017 15.1 4.3 0.024 14.5 4.3 1.2 1 0 0 1 1 1 0 DM DNA binding domain DUF5331 PF17265.2 ORF43816 - 0.09 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5331) DUF5434 PF17502.2 ORF43760 - 0.039 14.0 2.2 0.044 13.8 2.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5434) WD40 PF00400.32 ORF4366 - 6.9e-12 45.7 0.2 2.5e-06 28.1 0.0 2.0 2 0 0 2 2 2 2 WD domain, G-beta repeat zf-CCHC_5 PF14787.6 ORF4366 - 0.07 12.8 1.5 0.12 12.1 1.5 1.4 1 0 0 1 1 1 0 GAG-polyprotein viral zinc-finger Ge1_WD40 PF16529.5 ORF4366 - 0.26 10.2 0.8 3.8 6.4 0.1 1.9 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein EF-hand_7 PF13499.6 ORF43044 - 0.00036 20.9 0.1 0.00049 20.5 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF43044 - 0.00064 19.4 0.0 0.0013 18.5 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF43044 - 0.0072 15.8 0.6 0.014 14.8 0.6 1.5 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF43044 - 0.0081 15.6 0.2 0.016 14.7 0.2 1.6 1 0 0 1 1 1 1 EF hand Glyco_hydro_38N PF01074.22 ORF43005 - 2.1e-09 37.2 1.0 2.4e-09 37.0 1.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Tat PF00539.18 ORF426 - 0.07 13.3 5.9 0.092 12.9 5.9 1.3 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) Zn_peptidase PF04228.13 ORF4216 - 4e-35 121.7 0.7 4.4e-35 121.5 0.7 1.0 1 0 0 1 1 1 1 Putative neutral zinc metallopeptidase Sad1_UNC PF07738.13 ORF41912 - 0.027 14.5 0.0 0.033 14.2 0.0 1.2 1 0 0 1 1 1 0 Sad1 / UNC-like C-terminal PH_12 PF16457.5 ORF41835 - 0.013 16.1 0.2 0.019 15.5 0.2 1.3 1 0 0 1 1 1 0 Pleckstrin homology domain TraS PF10624.9 ORF40726 - 0.56 10.1 4.9 1.6 8.7 2.6 1.9 1 1 1 2 2 2 0 Plasmid conjugative transfer entry exclusion protein TraS YpmT PF17431.2 ORF39824 - 0.013 15.5 1.9 0.017 15.2 1.9 1.2 1 0 0 1 1 1 0 Uncharacterized YmpT-like PigN PF04987.14 ORF39824 - 0.34 9.7 8.1 0.38 9.5 8.1 1.0 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) DUF3927 PF13064.6 ORF39354 - 0.32 11.0 0.1 0.32 11.0 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3927) Acetyltransf_2 PF00797.17 ORF39135 - 0.13 12.1 0.0 0.21 11.3 0.0 1.3 1 1 1 2 2 2 0 N-acetyltransferase DUF1196 PF06709.11 ORF38697 - 2 8.6 3.3 8.1 6.7 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1196) Spo12 PF05032.12 ORF37363 - 0.011 15.6 1.5 0.011 15.6 1.5 1.7 2 0 0 2 2 2 0 Spo12 family Pox_F12L PF03337.13 ORF37175 - 0.015 13.5 0.0 0.017 13.3 0.0 1.0 1 0 0 1 1 1 0 Poxvirus F12L protein EF-hand_1 PF00036.32 ORF36866 - 8.2e-18 62.6 1.4 3.7e-08 32.4 0.2 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF36866 - 1.8e-15 57.1 0.8 2e-15 57.0 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF36866 - 1.1e-14 53.2 1.2 1.3e-06 27.6 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF36866 - 5.1e-14 50.9 0.6 8.2e-08 31.6 0.0 2.3 1 1 1 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF36866 - 3.8e-13 49.1 2.6 6.1e-08 32.4 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF36866 - 0.00022 21.5 0.1 0.00029 21.1 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF36866 - 0.00049 20.4 0.3 0.00053 20.3 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF36866 - 0.0024 18.7 0.0 0.0028 18.5 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF36866 - 0.013 15.5 0.4 0.026 14.5 0.4 1.6 1 1 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF2666 PF10869.8 ORF36866 - 0.033 14.4 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) DUF5580 PF17743.1 ORF36866 - 0.066 11.7 0.0 0.074 11.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 ORF36866 - 0.075 12.9 0.6 0.45 10.4 0.3 2.1 2 0 0 2 2 2 0 EF hand MORN PF02493.20 ORF3686 - 2e-11 43.1 8.5 0.0018 18.0 0.3 3.1 3 0 0 3 3 3 3 MORN repeat rve PF00665.26 ORF36787 - 0.093 12.9 0.0 0.095 12.9 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain TMEM239 PF15841.5 ORF36752 - 0.12 12.3 1.1 0.14 12.0 1.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 239 family SAP PF02037.27 ORF35577 - 7.6e-05 22.4 0.2 7.6e-05 22.4 0.2 1.9 2 0 0 2 2 2 1 SAP domain Telomere_Sde2_2 PF13297.6 ORF35577 - 0.00027 20.5 0.1 0.00046 19.8 0.1 1.4 1 1 0 1 1 1 1 Telomere stability C-terminal Corona_S2 PF01601.16 ORF35438 - 6.1 5.2 9.2 5.6 5.3 9.2 1.1 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein DUF3267 PF11667.8 ORF34507 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF34507 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region DUF4044 PF13253.6 ORF34025 - 0.055 13.0 0.3 0.14 11.7 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) Pneumo_phosprot PF02478.16 ORF33370 - 0.19 11.2 0.6 0.21 11.1 0.6 1.0 1 0 0 1 1 1 0 Pneumovirus phosphoprotein Luteo_P1-P2 PF08467.10 ORF33272 - 0.0097 15.2 0.1 0.0097 15.2 0.1 1.0 1 0 0 1 1 1 1 Luteovirus RNA polymerase P1-P2/replicase KMP11 PF03037.16 ORF32647 - 0.014 16.2 0.6 0.016 16.0 0.6 1.1 1 0 0 1 1 1 0 Kinetoplastid membrane protein 11 COG5 PF10392.9 ORF32647 - 0.03 14.5 0.1 0.037 14.2 0.1 1.1 1 0 0 1 1 1 0 Golgi transport complex subunit 5 HBM PF16591.5 ORF32647 - 0.063 12.7 0.1 0.071 12.5 0.1 1.0 1 0 0 1 1 1 0 Helical bimodular sensor domain Metal_resist PF13801.6 ORF32647 - 0.083 13.1 0.1 0.094 12.9 0.1 1.1 1 0 0 1 1 1 0 Heavy-metal resistance Peptidase_C25 PF01364.18 ORF32633 - 0.49 9.5 2.1 0.54 9.4 2.1 1.0 1 0 0 1 1 1 0 Peptidase family C25 RNF220 PF15926.5 ORF3149 - 0.018 14.6 0.4 0.021 14.5 0.4 1.1 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase RNF220 Zn-C2H2_12 PF18112.1 ORF3149 - 1.8 9.1 4.3 10 6.7 4.3 2.0 1 1 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain DUF1272 PF06906.11 ORF31313 - 0.11 12.5 0.1 0.23 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) CENP-N PF05238.13 ORF31067 - 0.1 11.9 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like DUF3914 PF13053.6 ORF31012 - 0.093 13.1 0.0 0.098 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3914) PilP PF04351.13 ORF29720 - 0.073 13.0 0.1 0.081 12.9 0.1 1.1 1 0 0 1 1 1 0 Pilus assembly protein, PilP rpo30_N PF12410.8 ORF29663 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Poxvirus DNA dependent RNA polymerase 30kDa subunit Asparaginase_II PF06089.12 ORF29517 - 0.086 11.8 0.0 0.086 11.8 0.0 1.0 1 0 0 1 1 1 0 L-asparaginase II Herpes_LMP1 PF05297.11 ORF29517 - 0.67 9.1 4.7 0.61 9.2 4.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) ERGIC_N PF13850.6 ORF29461 - 0.0012 19.1 0.3 0.0014 19.0 0.3 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) AGP PF06376.12 ORF29461 - 0.077 12.9 1.8 0.14 12.1 1.8 1.4 1 0 0 1 1 1 0 Arabinogalactan peptide VMA21 PF09446.10 ORF29387 - 0.023 14.8 0.9 0.027 14.6 0.9 1.2 1 0 0 1 1 1 0 VMA21-like domain Mgr1 PF08602.10 ORF29260 - 0.15 10.8 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit LPD24 PF18839.1 ORF29260 - 0.19 12.0 0.2 0.24 11.7 0.2 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 24 GIT1_C PF12205.8 ORF29116 - 0.073 13.2 0.2 0.081 13.0 0.2 1.1 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term DUF4116 PF13475.6 ORF29071 - 0.0044 16.7 0.0 0.0061 16.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4116) Remorin_N PF03766.13 ORF28623 - 0.14 12.2 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Remorin, N-terminal region CRAL_TRIO PF00650.20 ORF28468 - 3e-08 33.5 0.4 3.1e-08 33.5 0.4 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain Peptidase_M99_m PF17130.4 ORF27439 - 0.096 12.6 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 beta-barrel domain of carboxypeptidase M99 DUF3267 PF11667.8 ORF27373 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF27373 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Enkurin PF13864.6 ORF26337 - 0.00091 19.6 2.1 0.0011 19.3 2.1 1.2 1 0 0 1 1 1 1 Calmodulin-binding Cep57_MT_bd PF06657.13 ORF26337 - 0.014 15.9 3.4 0.021 15.3 2.7 1.6 1 1 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 Cob_adeno_trans PF01923.18 ORF26337 - 0.039 14.1 0.7 0.042 14.0 0.7 1.0 1 0 0 1 1 1 0 Cobalamin adenosyltransferase LRS4 PF10422.9 ORF26337 - 0.039 13.5 6.7 0.042 13.4 6.7 1.0 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 HEPN_Toprim_N PF18871.1 ORF26337 - 0.043 13.7 0.0 0.046 13.7 0.0 1.0 1 0 0 1 1 1 0 HEPN/Toprim N-terminal domain 1 FlxA PF14282.6 ORF26337 - 0.29 11.1 9.6 0.34 10.9 9.6 1.2 1 0 0 1 1 1 0 FlxA-like protein Fib_alpha PF08702.10 ORF26337 - 0.31 11.2 5.7 0.33 11.1 5.7 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Fz PF01392.22 ORF25325 - 0.056 14.1 0.2 0.059 14.0 0.2 1.1 1 0 0 1 1 1 0 Fz domain CCDC106 PF15794.5 ORF24947 - 0.11 12.2 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Cut8 PF08559.10 ORF24356 - 0.014 15.0 0.0 0.019 14.6 0.0 1.1 1 0 0 1 1 1 0 Cut8, nuclear proteasome tether protein Peptidase_M41 PF01434.18 ORF23877 - 0.12 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M41 CTK3 PF12243.8 ORF23387 - 0.16 12.0 1.1 0.16 12.0 1.1 1.1 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 Autophagy_C PF10381.9 ORF23387 - 2.5 7.7 6.8 0.46 10.0 2.0 2.2 2 1 0 2 2 2 0 Autophagocytosis associated protein C-terminal BppL_N PF18338.1 ORF22072 - 0.14 12.0 0.1 0.21 11.4 0.1 1.2 1 0 0 1 1 1 0 Lower baseplate protein N-terminal domain DUF2456 PF10445.9 ORF21343 - 0.054 13.6 2.7 0.057 13.5 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2456) DUF2576 PF10845.8 ORF21267 - 0.046 13.3 0.3 0.065 12.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) DUF3797 PF12677.7 ORF20019 - 0.13 12.2 4.7 0.14 12.1 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) DUF3433 PF11915.8 ORF19280 - 0.096 13.2 0.6 0.17 12.3 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3433) DUF4519 PF15012.6 ORF1923 - 0.05 13.8 0.3 0.15 12.2 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4519) DUF3333 PF11812.8 ORF18689 - 0.09 13.0 0.0 0.1 12.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) TMEM247 PF15444.6 ORF18048 - 2.3 8.2 4.3 2.6 8.0 4.3 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 Asparaginase_II PF06089.12 ORF17502 - 0.086 11.8 0.0 0.086 11.8 0.0 1.0 1 0 0 1 1 1 0 L-asparaginase II Herpes_LMP1 PF05297.11 ORF17502 - 0.67 9.1 4.7 0.61 9.2 4.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Ribosomal_S3_C PF00189.20 ORF17453 - 0.048 14.2 0.5 0.085 13.4 0.4 1.4 1 1 0 1 1 1 0 Ribosomal protein S3, C-terminal domain DUF3267 PF11667.8 ORF17339 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF17339 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region ASFV_L11L PF05293.11 ORF17110 - 0.13 12.6 2.0 0.12 12.8 1.3 1.4 1 1 0 1 1 1 0 African swine fever virus (ASFV) L11L protein Deltameth_res PF16020.5 ORF16520 - 1.4 8.9 2.8 2.8 7.9 0.3 2.0 1 1 1 2 2 2 0 Deltamethrin resistance DUF3433 PF11915.8 ORF16287 - 0.096 13.2 0.6 0.17 12.3 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3433) SNAD3 PF18749.1 ORF16245 - 0.099 11.8 0.1 0.1 11.7 0.1 1.0 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 3 Neuromodulin PF06614.11 ORF15906 - 0.072 13.3 0.0 0.083 13.1 0.0 1.0 1 0 0 1 1 1 0 Neuromodulin Pyridox_oxase_2 PF12766.7 ORF152906 - 0.0099 16.5 0.5 0.011 16.4 0.5 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Fun_ATP-synt_8 PF05933.13 ORF151770 - 0.028 14.6 0.9 0.051 13.7 0.7 1.6 1 1 0 1 1 1 0 Fungal ATP synthase protein 8 (A6L) DUF3530 PF12048.8 ORF149833 - 0.076 12.4 0.4 0.077 12.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) zf-C3HC4_2 PF13923.6 ORF149404 - 0.0056 16.5 0.2 0.012 15.5 0.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF149404 - 0.0087 15.9 0.3 0.014 15.3 0.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) DUF3267 PF11667.8 ORF148977 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF148977 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region DUF1910 PF08928.10 ORF147965 - 0.15 12.0 0.4 0.17 11.9 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1910) Retrotran_gag_3 PF14244.6 ORF147169 - 0.075 12.8 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type CDC13_N PF16853.5 ORF146921 - 0.014 14.9 0.5 0.016 14.7 0.5 1.0 1 0 0 1 1 1 0 Cell division control protein 13 N-terminus Mab-21 PF03281.14 ORF146237 - 0.064 12.5 0.0 0.065 12.5 0.0 1.0 1 0 0 1 1 1 0 Mab-21 protein CRT-like PF08627.10 ORF146231 - 0.11 11.4 0.2 0.11 11.4 0.2 1.0 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like IpaB_EvcA PF03278.13 ORF145931 - 0.0014 18.3 1.1 0.0016 18.2 1.1 1.1 1 0 0 1 1 1 1 IpaB/EvcA family DUF4665 PF15679.5 ORF145931 - 0.0055 17.3 3.3 0.0057 17.3 3.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4665) DUF2374 PF09574.10 ORF145695 - 0.013 15.3 0.2 0.019 14.8 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (Duf2374) NdhS PF11623.8 ORF145524 - 0.17 11.5 0.0 1.7 8.4 0.0 2.0 2 0 0 2 2 2 0 NAD(P)H dehydrogenase subunit S Tat PF00539.18 ORF145431 - 0.07 13.3 5.9 0.092 12.9 5.9 1.3 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) RNA12 PF10443.9 ORF144917 - 0.0027 16.5 0.0 0.0028 16.5 0.0 1.0 1 0 0 1 1 1 1 RNA12 protein nsp9 PF08710.10 ORF144917 - 0.084 13.3 0.0 0.089 13.2 0.0 1.0 1 0 0 1 1 1 0 nsp9 replicase ERGIC_N PF13850.6 ORF144836 - 0.04 14.2 0.3 0.055 13.8 0.3 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ATP-synt_8 PF00895.20 ORF144376 - 0.096 13.2 9.4 0.16 12.5 9.4 1.6 1 1 0 1 1 1 0 ATP synthase protein 8 Pneumo_matrix PF03393.16 ORF142811 - 0.01 15.1 0.6 0.011 14.9 0.6 1.0 1 0 0 1 1 1 0 Pneumovirus matrix protein EF-hand_6 PF13405.6 ORF142316 - 0.028 14.3 0.0 0.065 13.2 0.0 1.6 2 0 0 2 2 2 0 EF-hand domain EF-hand_7 PF13499.6 ORF142316 - 0.034 14.6 0.0 0.041 14.3 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_1 PF00036.32 ORF142316 - 0.047 13.2 0.0 0.074 12.6 0.0 1.4 1 0 0 1 1 1 0 EF hand EF-hand_8 PF13833.6 ORF142316 - 0.066 13.1 0.0 0.082 12.8 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair PROCN PF08083.11 ORF142316 - 0.19 10.4 0.0 0.23 10.2 0.0 1.0 1 0 0 1 1 1 0 PROCN (NUC071) domain DUF5058 PF16481.5 ORF141748 - 0.0063 16.2 0.0 0.0076 16.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5058) Bcl-2_BAD PF10514.9 ORF140947 - 0.069 13.6 0.1 0.081 13.4 0.1 1.1 1 0 0 1 1 1 0 Pro-apoptotic Bcl-2 protein, BAD CENP-N PF05238.13 ORF140651 - 0.1 11.9 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like Na_trans_assoc PF06512.13 ORF140620 - 0.11 12.8 1.6 0.14 12.4 1.6 1.2 1 0 0 1 1 1 0 Sodium ion transport-associated EndoU_bacteria PF14436.6 ORF140497 - 0.16 12.3 0.0 0.18 12.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial EndoU nuclease Cons_hypoth95 PF03602.15 ORF140158 - 0.13 11.8 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 Conserved hypothetical protein 95 DUF4768 PF15989.5 ORF139839 - 0.022 14.7 2.2 0.022 14.7 2.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4768) zf-RING-like PF08746.11 ORF139407 - 0.88 9.9 7.5 0.45 10.9 2.2 2.2 1 1 1 2 2 2 0 RING-like domain DUF782 PF05614.11 ORF139264 - 0.049 14.0 0.1 0.049 14.0 0.1 1.2 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) DUF2430 PF10353.9 ORF139204 - 0.077 13.4 1.9 0.087 13.2 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2430) Acyl-ACP_TE PF01643.17 ORF139204 - 0.25 10.6 0.2 0.42 9.9 0.1 1.4 1 1 1 2 2 2 0 Acyl-ACP thioesterase Lectin_C_term PF18022.1 ORF138509 - 0.01 16.3 0.0 0.012 16.1 0.0 1.1 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin C-terminal domain SAP PF02037.27 ORF138253 - 7.6e-05 22.4 0.2 7.6e-05 22.4 0.2 1.9 2 0 0 2 2 2 1 SAP domain Telomere_Sde2_2 PF13297.6 ORF138253 - 0.00027 20.5 0.1 0.00046 19.8 0.1 1.4 1 1 0 1 1 1 1 Telomere stability C-terminal LRRNT PF01462.18 ORF138043 - 0.2 11.4 4.3 5 6.9 0.1 2.6 2 1 0 2 2 2 0 Leucine rich repeat N-terminal domain DUF5460 PF17544.2 ORF137987 - 0.16 10.9 0.0 0.19 10.7 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5460) UL42 PF17638.2 ORF13756 - 0.011 15.7 1.7 0.014 15.4 1.7 1.3 1 0 0 1 1 1 0 HCMV UL42 DUF4210 PF13915.6 ORF137469 - 0.046 14.3 0.0 0.077 13.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4210) DUF1039 PF06287.11 ORF13672 - 0.013 15.9 0.1 0.02 15.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1039) DUF3530 PF12048.8 ORF136717 - 0.076 12.4 0.4 0.077 12.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3530) Osmo_CC PF08946.10 ORF136518 - 0.0083 16.4 1.0 0.016 15.4 1.0 1.5 1 0 0 1 1 1 1 Osmosensory transporter coiled coil SOGA PF11365.8 ORF136518 - 0.013 16.6 0.9 0.13 13.4 1.0 1.9 1 1 0 1 1 1 0 Protein SOGA Nup54 PF13874.6 ORF136518 - 0.018 15.1 0.1 0.023 14.8 0.1 1.2 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 TMF_TATA_bd PF12325.8 ORF136518 - 0.032 14.4 0.9 0.047 13.9 0.9 1.3 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding TolA_bind_tri PF16331.5 ORF136518 - 0.033 14.3 1.3 2.6 8.2 0.0 2.0 2 0 0 2 2 2 0 TolA binding protein trimerisation CREPT PF16566.5 ORF136518 - 0.052 13.7 0.3 0.76 9.9 0.2 1.9 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour LidA_Long_CC PF18641.1 ORF136518 - 0.066 13.3 2.1 0.083 12.9 2.1 1.2 1 1 0 1 1 1 0 LidA long coiled-coil domain YkyA PF10368.9 ORF136518 - 0.11 12.2 4.8 0.32 10.6 4.8 1.6 1 1 0 1 1 1 0 Putative cell-wall binding lipoprotein DUF267 PF03268.14 ORF136518 - 0.12 11.2 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF267 ABC_tran_CTD PF16326.5 ORF136518 - 0.12 12.6 3.2 0.19 12.0 3.2 1.3 1 1 0 1 1 1 0 ABC transporter C-terminal domain Prefoldin_2 PF01920.20 ORF136518 - 0.2 11.7 4.1 0.75 9.8 2.0 1.7 1 1 0 1 1 1 0 Prefoldin subunit DivIC PF04977.15 ORF136518 - 0.29 10.9 3.0 0.83 9.5 2.2 1.9 1 1 1 2 2 2 0 Septum formation initiator TraC PF07820.12 ORF136518 - 0.42 11.0 2.5 0.66 10.3 2.3 1.6 1 1 0 1 1 1 0 TraC-like protein PAP_assoc PF03828.19 ORF136185 - 0.085 13.1 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Cid1 family poly A polymerase DUF4187 PF13821.6 ORF135303 - 0.027 14.2 1.1 0.038 13.8 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) ArsP_1 PF03773.13 ORF134842 - 0.0054 15.9 0.7 0.0054 15.9 0.7 1.0 1 0 0 1 1 1 1 Predicted permease Remorin_N PF03766.13 ORF134036 - 0.14 12.2 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Remorin, N-terminal region zf-C2H2_11 PF16622.5 ORF133179 - 0.00057 19.6 1.9 0.0011 18.7 1.9 1.5 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2_4 PF13894.6 ORF133179 - 0.0013 19.4 0.5 0.0022 18.7 0.5 1.4 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF133179 - 0.0069 16.8 0.7 0.0099 16.3 0.7 1.3 1 0 0 1 1 1 1 Zinc finger, C2H2 type U83 PF17465.2 ORF133179 - 0.017 15.2 0.3 0.021 15.0 0.3 1.2 1 0 0 1 1 1 0 Chemokine-like protein, HHV-6 U83 gene product zf-met PF12874.7 ORF133179 - 0.071 13.5 0.4 0.54 10.7 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF133179 - 0.12 12.7 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding MMPL PF03176.15 ORF133096 - 0.45 9.4 1.9 0.44 9.4 1.9 1.0 1 0 0 1 1 1 0 MMPL family PHF5 PF03660.14 ORF132395 - 0.051 13.8 3.6 0.065 13.4 3.6 1.3 1 1 0 1 1 1 0 PHF5-like protein Neurexophilin PF06312.12 ORF131967 - 0.042 13.3 0.3 0.045 13.2 0.3 1.1 1 0 0 1 1 1 0 Neurexophilin Ras PF00071.22 ORF131554 - 2.5e-07 30.5 0.1 2.7e-07 30.3 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF131554 - 2.8e-07 30.8 0.0 3e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase YpsA PF06908.11 ORF131554 - 0.0026 17.8 0.0 0.0026 17.8 0.0 1.1 1 0 0 1 1 1 1 YspA SLOG family Ras PF00071.22 ORF131553 - 0.00028 20.5 0.1 0.00036 20.2 0.1 1.2 1 0 0 1 1 1 1 Ras family Asparaginase_II PF06089.12 ORF131400 - 0.086 11.8 0.0 0.086 11.8 0.0 1.0 1 0 0 1 1 1 0 L-asparaginase II Herpes_LMP1 PF05297.11 ORF131400 - 0.67 9.1 4.7 0.61 9.2 4.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Feld-I_B PF09252.10 ORF131285 - 0.0094 15.9 0.1 0.014 15.3 0.1 1.3 1 0 0 1 1 1 1 Allergen Fel d I-B chain Ion_trans PF00520.31 ORF130762 - 7.4e-07 28.6 0.5 8.1e-07 28.5 0.5 1.0 1 0 0 1 1 1 1 Ion transport protein NPCC PF08058.11 ORF130762 - 0.087 12.9 0.7 0.092 12.8 0.7 1.1 1 0 0 1 1 1 0 Nuclear pore complex component ApoO PF09769.9 ORF130491 - 0.099 12.6 0.1 0.24 11.4 0.0 1.6 1 1 1 2 2 2 0 Apolipoprotein O ADAM17_MPD PF16698.5 ORF130384 - 0.13 12.7 1.8 0.15 12.5 1.8 1.1 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 Acetyltransf_2 PF00797.17 ORF130098 - 0.13 12.1 0.0 0.21 11.3 0.0 1.3 1 1 1 2 2 2 0 N-acetyltransferase GlnE PF03710.15 ORF129786 - 0.14 11.6 0.3 0.14 11.5 0.3 1.0 1 0 0 1 1 1 0 Glutamate-ammonia ligase adenylyltransferase DUF3149 PF11346.8 ORF128801 - 0.15 11.7 0.2 0.24 11.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) Feld-I_B PF09252.10 ORF12873 - 0.0094 15.9 0.1 0.014 15.3 0.1 1.3 1 0 0 1 1 1 1 Allergen Fel d I-B chain Flu_B_NS1 PF02942.14 ORF128505 - 0.022 13.8 0.0 0.025 13.7 0.0 1.1 1 0 0 1 1 1 0 Influenza B non-structural protein (NS1) Soyouz_module PF14313.6 ORF128237 - 0.18 11.6 0.2 0.22 11.3 0.2 1.2 1 0 0 1 1 1 0 N-terminal region of Paramyxovirinae phosphoprotein (P) DUF5009 PF16401.5 ORF127454 - 0.022 14.3 0.0 0.022 14.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) Autophagy_act_C PF03987.15 ORF127201 - 0.15 12.7 0.9 0.35 11.5 0.6 1.7 2 0 0 2 2 2 0 Autophagocytosis associated protein, active-site domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks383.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks383.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks383.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks383.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NodZ PF05830.11 ORF126061 - 0.13 11.0 0.1 0.14 10.9 0.1 1.1 1 0 0 1 1 1 0 Nodulation protein Z (NodZ) DUF4044 PF13253.6 ORF125612 - 0.055 13.0 0.3 0.14 11.7 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) Sulfate_transp PF00916.20 ORF124746 - 0.015 14.0 0.0 0.017 13.9 0.0 1.0 1 0 0 1 1 1 0 Sulfate permease family DUF2152 PF10222.9 ORF124611 - 0.033 12.6 0.0 0.034 12.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2152) Levi_coat PF01819.17 ORF124491 - 0.088 12.8 0.1 0.092 12.8 0.1 1.0 1 0 0 1 1 1 0 Levivirus coat protein DUF3267 PF11667.8 ORF124209 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF124209 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region YgbB PF02542.16 ORF123494 - 0.026 14.8 0.0 0.028 14.7 0.0 1.0 1 0 0 1 1 1 0 YgbB family EIAV_GP90 PF00971.18 ORF123463 - 0.032 12.9 0.0 0.034 12.8 0.0 1.0 1 0 0 1 1 1 0 EIAV coat protein, gp90 YqgC PF17430.2 ORF123461 - 1.5e-39 133.9 2.5 2e-39 133.4 2.5 1.2 1 0 0 1 1 1 1 Uncharacterized YqgC-like DUF3267 PF11667.8 ORF123384 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF123384 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region CybS PF05328.12 ORF123294 - 0.52 10.0 3.4 0.56 9.9 3.4 1.1 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit DUF3649 PF12365.8 ORF123149 - 5.9 6.7 6.9 1.2 8.9 1.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3649) BC10 PF06726.12 ORF123016 - 0.024 14.9 3.2 0.024 14.9 3.2 1.4 1 1 0 1 1 1 0 Bladder cancer-related protein BC10 DUF3177 PF11375.8 ORF123016 - 0.64 9.8 5.4 0.72 9.6 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3177) DUF5617 PF18493.1 ORF122857 - 0.019 15.1 1.2 0.023 14.8 1.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5617) Se-cys_synth_N PF12390.8 ORF122510 - 0.0087 16.3 1.6 0.013 15.7 1.6 1.5 1 1 0 1 1 1 1 Selenocysteine synthase N terminal DUF3267 PF11667.8 ORF122420 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF122420 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region zf-CW PF07496.15 ORF12185 - 0.019 15.0 3.3 0.74 9.9 0.2 2.2 1 1 1 2 2 2 0 CW-type Zinc Finger DUF3267 PF11667.8 ORF121827 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF121827 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region DUF5529 PF17669.1 ORF12168 - 0.015 15.3 0.4 0.016 15.3 0.4 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5529) Peptidase_M11 PF05548.11 ORF120824 - 0.067 12.3 0.0 0.068 12.3 0.0 1.0 1 0 0 1 1 1 0 Gametolysin peptidase M11 CCER1 PF15482.6 ORF120210 - 0.079 12.9 0.4 0.087 12.7 0.4 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 F-box_5 PF18511.1 ORF120210 - 0.59 9.8 0.2 0.59 9.8 0.2 2.1 3 0 0 3 3 3 0 F-box SR-25 PF10500.9 ORF119465 - 1.9 8.0 8.0 2.1 7.9 8.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Levi_coat PF01819.17 ORF118949 - 0.088 12.8 0.1 0.092 12.8 0.1 1.0 1 0 0 1 1 1 0 Levivirus coat protein Reovirus_cap PF00979.17 ORF11880 - 0.15 11.2 1.3 0.14 11.3 1.3 1.1 1 0 0 1 1 1 0 Reovirus outer capsid protein, Sigma 3 TPK_B1_binding PF04265.14 ORF118535 - 0.022 14.4 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Ank_4 PF13637.6 ORF117414 - 0.013 16.0 0.1 0.018 15.6 0.1 1.2 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Ank PF00023.30 ORF117414 - 0.014 15.8 0.0 0.076 13.5 0.1 1.9 2 0 0 2 2 2 0 Ankyrin repeat Ank_2 PF12796.7 ORF117414 - 0.022 15.3 0.1 0.025 15.2 0.1 1.1 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF117414 - 0.059 13.7 0.0 0.091 13.1 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) Surfac_D-trimer PF09006.11 ORF117295 - 0.023 14.6 0.1 0.039 13.8 0.1 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Tnp_22_trimer PF17489.2 ORF117073 - 0.0094 15.9 0.7 0.016 15.2 0.7 1.4 1 0 0 1 1 1 1 L1 transposable element trimerization domain Tat PF00539.18 ORF116875 - 0.07 13.3 5.9 0.092 12.9 5.9 1.3 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) DUF3433 PF11915.8 ORF116317 - 0.096 13.2 0.6 0.17 12.3 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3433) Abhydrolase_6 PF12697.7 ORF116208 - 0.00096 19.8 0.1 0.0012 19.5 0.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family CRT-like PF08627.10 ORF115715 - 0.11 11.4 0.2 0.11 11.4 0.2 1.0 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like Mlf1IP PF10248.9 ORF115445 - 0.025 14.6 0.9 0.026 14.5 0.9 1.1 1 0 0 1 1 1 0 Myelodysplasia-myeloid leukemia factor 1-interacting protein Arf PF00025.21 ORF115445 - 0.03 13.8 0.0 0.035 13.6 0.0 1.0 1 0 0 1 1 1 0 ADP-ribosylation factor family DUF4372 PF14294.6 ORF115445 - 0.067 13.3 0.6 0.088 13.0 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4372) GpcrRhopsn4 PF10192.9 ORF114427 - 0.0069 15.8 6.5 0.0083 15.6 6.5 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain Tail_VII PF17091.5 ORF114268 - 0.052 13.4 0.3 0.052 13.4 0.3 1.8 2 0 0 2 2 2 0 Inovirus G7P protein Synaptobrevin PF00957.21 ORF113916 - 0.013 15.3 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 Synaptobrevin Tat PF00539.18 ORF113750 - 0.07 13.3 5.9 0.092 12.9 5.9 1.3 1 0 0 1 1 1 0 Transactivating regulatory protein (Tat) LCE6A PF15858.5 ORF113052 - 0.55 11.0 11.0 0.72 10.6 11.0 1.3 1 1 0 1 1 1 0 Late cornified envelope protein 6A family DUF295 PF03478.18 ORF112424 - 0.16 11.6 0.1 0.19 11.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF295) Toxin_37 PF11415.8 ORF112254 - 1.3 9.0 9.5 1.1 9.1 3.7 2.5 2 0 0 2 2 2 0 Antifungal peptide termicin CCDC-167 PF15188.6 ORF112147 - 0.0099 16.2 0.3 0.011 16.1 0.3 1.0 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 167 HV_small_capsid PF17086.5 ORF112103 - 0.14 12.5 0.0 0.16 12.2 0.0 1.3 1 1 0 1 1 1 0 Small capsid protein of Herpesviridae JAMP PF05571.12 ORF11205 - 1.4 8.4 5.0 0.66 9.5 1.7 1.7 1 1 1 2 2 2 0 JNK1/MAPK8-associated membrane protein PEMT PF04191.13 ORF111957 - 0.0087 16.4 0.1 0.0097 16.3 0.1 1.1 1 0 0 1 1 1 1 Phospholipid methyltransferase PRD_Mga PF08270.11 ORF110994 - 0.014 15.1 0.1 0.015 15.0 0.1 1.1 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) PRD domain RhoGEF PF00621.20 ORF110994 - 0.15 12.3 1.5 0.17 12.1 1.5 1.1 1 0 0 1 1 1 0 RhoGEF domain RVP_2 PF08284.11 ORF110912 - 0.097 12.4 0.6 0.096 12.5 0.6 1.2 1 0 0 1 1 1 0 Retroviral aspartyl protease NIF PF03031.18 ORF110774 - 0.11 12.2 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 NLI interacting factor-like phosphatase MORN PF02493.20 ORF110310 - 7.4e-20 69.6 18.4 3.3e-08 33.0 1.0 4.0 4 0 0 4 4 4 3 MORN repeat Tudor_2 PF18104.1 ORF110310 - 0.00034 20.2 0.9 0.31 10.8 0.0 2.8 2 1 0 2 2 2 2 Jumonji domain-containing protein 2A Tudor domain DUF3048_C PF17479.2 ORF110310 - 0.22 11.9 5.2 1 9.8 4.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain GPR15L PF15854.5 ORF110291 - 0.024 14.9 5.9 0.042 14.1 3.0 2.0 1 1 1 2 2 2 0 G-protein coupled receptor ligand 15 NAGLU PF05089.12 ORF110291 - 0.065 12.2 0.0 0.065 12.2 0.0 1.0 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain Acetyltransf_10 PF13673.7 ORF109251 - 7.6e-13 48.5 0.0 8.7e-13 48.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF109251 - 1.2e-06 28.8 0.0 1.7e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF109251 - 0.0016 18.6 0.0 0.0023 18.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Esterase PF00756.20 ORF109134 - 0.00061 19.5 0.0 0.0007 19.3 0.0 1.1 1 0 0 1 1 1 1 Putative esterase MFP2b PF12150.8 ORF109134 - 0.022 14.1 0.1 0.029 13.7 0.1 1.1 1 0 0 1 1 1 0 Cytosolic motility protein ERCC4 PF02732.15 ORF108875 - 0.0047 17.2 0.0 0.0048 17.1 0.0 1.0 1 0 0 1 1 1 1 ERCC4 domain PD-C2-AF1 PF09310.10 ORF108858 - 0.11 11.8 0.1 0.27 10.6 0.0 1.6 1 1 1 2 2 2 0 POU domain, class 2, associating factor 1 Peptidase_C65 PF10275.9 ORF108257 - 0.21 11.0 0.0 0.24 10.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase C65 Otubain Pneumo_phosprot PF02478.16 ORF108014 - 0.19 11.2 0.6 0.21 11.1 0.6 1.0 1 0 0 1 1 1 0 Pneumovirus phosphoprotein GCK PF07802.11 ORF106853 - 0.0092 16.4 0.8 0.011 16.2 0.8 1.1 1 0 0 1 1 1 1 GCK domain RsbU_N PF08673.10 ORF106530 - 0.11 12.6 0.5 0.59 10.3 0.2 1.9 1 1 1 2 2 2 0 Phosphoserine phosphatase RsbU, N-terminal domain V_ATPase_I PF01496.19 ORF106367 - 0.7 7.7 4.5 0.64 7.9 4.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family SR-25 PF10500.9 ORF106036 - 1.9 8.0 8.0 2.1 7.9 8.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein SMK-1 PF04802.15 ORF105997 - 0.13 12.1 4.6 0.14 11.9 4.6 1.1 1 0 0 1 1 1 0 Component of IIS longevity pathway SMK-1 PSI_integrin PF17205.3 ORF105234 - 0.049 13.4 0.1 0.059 13.1 0.1 1.1 1 0 0 1 1 1 0 Integrin plexin domain Prok-RING_1 PF14446.6 ORF104836 - 0.04 13.8 5.5 0.083 12.8 5.5 1.8 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 Asparaginase_II PF06089.12 ORF104786 - 0.086 11.8 0.0 0.086 11.8 0.0 1.0 1 0 0 1 1 1 0 L-asparaginase II Herpes_LMP1 PF05297.11 ORF104786 - 0.67 9.1 4.7 0.61 9.2 4.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) CD36 PF01130.21 ORF104584 - 0.044 12.3 0.0 0.045 12.3 0.0 1.0 1 0 0 1 1 1 0 CD36 family Asparaginase_II PF06089.12 ORF104508 - 0.086 11.8 0.0 0.086 11.8 0.0 1.0 1 0 0 1 1 1 0 L-asparaginase II Herpes_LMP1 PF05297.11 ORF104508 - 0.67 9.1 4.7 0.61 9.2 4.7 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) YpmT PF17431.2 ORF104159 - 0.013 15.5 1.9 0.017 15.2 1.9 1.2 1 0 0 1 1 1 0 Uncharacterized YmpT-like PigN PF04987.14 ORF104159 - 0.34 9.7 8.1 0.38 9.5 8.1 1.0 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) HSCB_C PF07743.13 ORF103394 - 4.8e-10 39.8 4.8 5.4e-10 39.6 4.8 1.0 1 0 0 1 1 1 1 HSCB C-terminal oligomerisation domain Apt1 PF10351.9 ORF103394 - 0.02 13.8 1.1 0.022 13.6 1.1 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain DUF3267 PF11667.8 ORF103344 - 0.017 15.4 0.2 0.019 15.3 0.2 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Popeye PF04831.13 ORF103344 - 0.056 13.6 0.2 0.056 13.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Kelch_4 PF13418.6 ORF103089 - 8.8e-06 25.6 0.0 1.1e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF103089 - 4.3e-05 23.3 0.1 5.9e-05 22.9 0.1 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 ORF103089 - 4.8e-05 23.2 0.0 6.4e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 ORF103089 - 0.0094 15.5 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Kelch motif EF-hand_1 PF00036.32 ORF10294 - 6.9e-16 56.5 8.1 3.2e-08 32.6 1.6 2.1 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF10294 - 2.7e-15 55.9 3.7 2.5e-11 43.2 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF10294 - 3.3e-15 56.3 0.8 3.7e-15 56.1 0.8 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF10294 - 6.5e-13 47.5 3.6 1.4e-06 27.8 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF10294 - 6.5e-07 28.6 12.0 0.00042 19.7 1.6 2.8 2 1 1 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF10294 - 0.00026 21.3 0.3 0.00028 21.2 0.3 1.1 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF10294 - 0.0063 16.7 0.0 0.0091 16.2 0.0 1.2 1 0 0 1 1 1 1 Dockerin type I domain EF-hand_4 PF12763.7 ORF10294 - 0.012 15.6 0.3 0.016 15.1 0.3 1.2 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF1456 PF07308.13 ORF10294 - 0.021 15.2 0.3 0.077 13.3 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1456) PMBR PF09373.10 ORF10294 - 0.042 14.0 0.0 5.1 7.4 0.0 2.6 3 0 0 3 3 3 0 Pseudomurein-binding repeat EF-hand_9 PF14658.6 ORF10294 - 0.046 14.1 0.0 0.053 13.9 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain Nnf1 PF03980.14 ORF10294 - 0.11 12.9 0.1 0.14 12.5 0.1 1.3 1 0 0 1 1 1 0 Nnf1 PSI_integrin PF17205.3 ORF101269 - 0.049 13.4 0.1 0.059 13.1 0.1 1.1 1 0 0 1 1 1 0 Integrin plexin domain KA1 PF02149.19 ORF100491 - 5.5e-05 22.9 0.5 0.0063 16.3 0.3 2.7 2 1 0 2 2 2 2 Kinase associated domain 1 SelP_N PF04592.14 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_1 - 7.6 5.9 14.0 8.2 5.7 14.0 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region PDGF PF00341.17 NODE_75982_length_208_cov_0.820809_g68041_i0forward_frame_1 - 0.095 13.0 3.8 0.11 12.8 3.8 1.2 1 0 0 1 1 1 0 PDGF/VEGF domain HrpB1_HrpK PF09613.10 NODE_75980_length_208_cov_0.843931_g68039_i0reverse_frame_1 - 0.06 13.0 0.7 1.9 8.1 0.2 2.0 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) Cecropin PF00272.19 NODE_75980_length_208_cov_0.843931_g68039_i0forward_frame_1 - 0.037 13.8 0.1 0.037 13.8 0.1 2.0 3 0 0 3 3 3 0 Cecropin family RtcR PF06956.11 NODE_75978_length_208_cov_0.867052_g68037_i0reverse_frame_1 - 0.028 13.8 0.1 0.028 13.8 0.1 1.0 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase Orexin PF02072.15 NODE_75946_length_208_cov_0.924855_g68005_i0reverse_frame_1 - 0.039 13.9 0.0 0.042 13.8 0.0 1.0 1 0 0 1 1 1 0 Prepro-orexin VP_N-CPKC PF11475.8 NODE_75946_length_208_cov_0.924855_g68005_i0forward_frame_1 - 0.13 12.1 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Virion protein N terminal domain Hexapep PF00132.24 NODE_75944_length_208_cov_0.965318_g68003_i0forward_frame_1 - 2.5e-14 52.3 14.2 2.3e-07 30.2 5.4 2.1 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 NODE_75944_length_208_cov_0.965318_g68003_i0forward_frame_1 - 0.00065 19.4 13.1 0.0089 15.8 12.3 2.6 1 1 1 2 2 2 2 Hexapeptide repeat of succinyl-transferase GGN PF15685.5 NODE_75933_length_208_cov_1.040462_g67992_i0reverse_frame_1 - 0.018 14.2 0.1 0.019 14.0 0.1 1.0 1 0 0 1 1 1 0 Gametogenetin SKG6 PF08693.10 NODE_75929_length_208_cov_1.075145_g67988_i0reverse_frame_1 - 0.041 13.3 3.5 0.06 12.8 3.5 1.3 1 0 0 1 1 1 0 Transmembrane alpha-helix domain 7tm_6 PF02949.20 NODE_75924_length_208_cov_1.092486_g67983_i0reverse_frame_1 - 0.021 13.9 0.6 0.024 13.7 0.6 1.0 1 0 0 1 1 1 0 7tm Odorant receptor MRP-S33 PF08293.11 NODE_75923_length_208_cov_1.098266_g67982_i0forward_frame_1 - 0.018 15.2 0.3 0.02 15.1 0.3 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit S27 DUF3671 PF12420.8 NODE_75913_length_208_cov_1.156069_g67972_i0forward_frame_1 - 0.00072 19.6 0.1 0.00075 19.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF456 PF04306.13 NODE_75913_length_208_cov_1.156069_g67972_i0forward_frame_1 - 0.0021 18.4 0.3 0.0024 18.2 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF456) Calponin PF00402.18 NODE_75910_length_208_cov_1.190751_g67969_i0reverse_frame_1 - 0.026 14.2 0.1 1.1 9.0 0.0 2.4 2 0 0 2 2 2 0 Calponin family repeat Kelch_1 PF01344.25 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 4.2e-11 42.3 2.0 6e-06 25.8 0.1 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 2.9e-09 36.8 2.2 3.2e-05 23.8 0.7 2.1 1 1 1 2 2 2 2 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 3.5e-08 33.4 1.8 0.0029 17.9 0.3 2.1 1 1 1 2 2 2 2 Kelch motif Kelch_3 PF13415.6 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 1.9e-06 28.0 0.4 0.006 16.8 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 0.0048 16.8 0.1 0.0073 16.3 0.1 1.4 1 0 0 1 1 1 1 Kelch motif DUF1247 PF06851.11 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 0.05 13.5 0.0 0.055 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) Kelch_2 PF07646.15 NODE_75909_length_208_cov_1.190751_g67968_i0forward_frame_1 - 0.08 13.0 0.1 1.2 9.2 0.0 2.1 2 0 0 2 2 2 0 Kelch motif Alg14 PF08660.11 NODE_75904_length_208_cov_1.260116_g67963_i0reverse_frame_1 - 0.021 14.7 0.2 0.025 14.5 0.2 1.0 1 0 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like PEGSRP PF07623.11 NODE_75897_length_208_cov_1.306358_g67956_i0forward_frame_1 - 0.1 12.4 0.9 0.22 11.4 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1584) CDRN PF05174.12 NODE_75888_length_208_cov_1.364162_g67947_i0forward_frame_1 - 0.032 13.9 0.1 0.038 13.7 0.1 1.4 1 1 0 1 1 1 0 Cysteine-rich D. radiodurans N terminus PelD_GGDEF PF16963.5 NODE_75883_length_208_cov_1.375723_g67942_i0forward_frame_1 - 0.018 14.8 0.3 0.03 14.1 0.3 1.2 1 0 0 1 1 1 0 PelD GGDEF domain PRY PF13765.6 NODE_75882_length_208_cov_1.375723_g67941_i0reverse_frame_1 - 0.0033 17.0 0.0 0.0046 16.5 0.0 1.2 1 0 0 1 1 1 1 SPRY-associated domain DUF2946 PF11162.8 NODE_75880_length_208_cov_1.381503_g67939_i0reverse_frame_1 - 0.042 14.5 0.1 0.044 14.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) PROL5-SMR PF15621.6 NODE_75878_length_208_cov_1.387283_g67937_i0reverse_frame_1 - 4.3 7.9 7.9 1.8 9.1 3.8 1.9 1 1 1 2 2 2 0 Proline-rich submaxillary gland androgen-regulated family SNF PF00209.18 NODE_75877_length_208_cov_1.387283_g67936_i0forward_frame_1 - 2e-09 36.7 0.7 2.1e-09 36.7 0.7 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family Pox_A32 PF04665.12 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.00071 19.1 0.0 0.00072 19.1 0.0 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein AAA_29 PF13555.6 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.0089 15.8 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.038 13.4 0.0 0.042 13.3 0.0 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.047 13.6 0.0 0.055 13.4 0.0 1.1 1 0 0 1 1 1 0 NACHT domain FtsK_SpoIIIE PF01580.18 NODE_75865_length_208_cov_1.398844_g67924_i0forward_frame_1 - 0.12 11.7 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family Ribosomal_L5e PF17144.4 NODE_75864_length_208_cov_1.398844_g67923_i0reverse_frame_1 - 0.088 12.8 5.5 0.1 12.6 5.5 1.0 1 0 0 1 1 1 0 Ribosomal large subunit proteins 60S L5, and 50S L18 DUF1413 PF07205.11 NODE_75859_length_208_cov_1.421965_g67918_i0forward_frame_1 - 0.14 12.2 0.5 0.46 10.5 0.0 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1413) SK_channel PF03530.14 NODE_75854_length_208_cov_1.439306_g67913_i0reverse_frame_1 - 0.15 12.1 4.2 0.17 11.9 4.2 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel Toxin_TOLIP PF00087.21 NODE_75849_length_208_cov_1.456647_g67908_i0reverse_frame_1 - 0.42 10.9 6.5 0.52 10.6 6.5 1.2 1 0 0 1 1 1 0 Snake toxin and toxin-like protein Yae1_N PF09811.9 NODE_75848_length_208_cov_1.468208_g67907_i0reverse_frame_1 - 0.073 12.8 5.4 0.23 11.2 5.4 1.8 1 1 0 1 1 1 0 Essential protein Yae1, N terminal C_tripleX PF02363.19 NODE_75848_length_208_cov_1.468208_g67907_i0forward_frame_1 - 6.6 7.2 16.2 1.2e+02 3.3 1.4 3.7 2 1 0 2 2 2 0 Cysteine rich repeat DUF3783 PF12646.7 NODE_75839_length_208_cov_1.520231_g67898_i0forward_frame_1 - 0.11 12.4 0.0 0.31 11.0 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3783) Metaviral_G PF09595.10 NODE_75838_length_208_cov_1.520231_g67897_i0forward_frame_1 - 0.00074 19.6 0.3 0.00077 19.6 0.3 1.1 1 0 0 1 1 1 1 Metaviral_G glycoprotein S4 PF01479.25 NODE_75837_length_208_cov_1.531792_g67896_i0reverse_frame_1 - 0.2 11.4 0.6 0.32 10.8 0.6 1.3 1 0 0 1 1 1 0 S4 domain Reo_P9 PF06043.11 NODE_75836_length_208_cov_1.537572_g67895_i0reverse_frame_1 - 0.034 13.6 0.6 0.036 13.5 0.6 1.0 1 0 0 1 1 1 0 Reovirus P9-like family 6PF2K PF01591.18 NODE_75826_length_208_cov_1.601156_g67885_i0reverse_frame_1 - 0.026 13.8 0.2 0.028 13.7 0.2 1.0 1 0 0 1 1 1 0 6-phosphofructo-2-kinase DUF4107 PF13389.6 NODE_75826_length_208_cov_1.601156_g67885_i0reverse_frame_1 - 0.16 12.2 1.2 0.17 12.1 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4107) AAA_lid_4 PF17864.1 NODE_75826_length_208_cov_1.601156_g67885_i0reverse_frame_1 - 0.16 11.7 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 RuvB AAA lid domain Mersacidin PF16934.5 NODE_75823_length_208_cov_1.612717_g67882_i0reverse_frame_1 - 0.068 13.0 0.3 0.092 12.5 0.2 1.3 1 1 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) GreA_GreB PF01272.19 NODE_75822_length_208_cov_1.612717_g67881_i0reverse_frame_1 - 0.022 14.6 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 Transcription elongation factor, GreA/GreB, C-term DUF496 PF04363.12 NODE_75822_length_208_cov_1.612717_g67881_i0reverse_frame_1 - 0.031 14.3 0.1 0.036 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF496) Speriolin_C PF15059.6 NODE_75821_length_208_cov_1.612717_g67880_i0reverse_frame_1 - 0.1 12.8 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Speriolin C-terminus AKAP28 PF14469.6 NODE_75819_length_208_cov_1.618497_g67878_i0reverse_frame_1 - 0.038 13.7 0.5 0.17 11.6 0.0 1.8 1 1 1 2 2 2 0 28 kDa A-kinase anchor Glyco_transf_5 PF08323.11 NODE_75819_length_208_cov_1.618497_g67878_i0forward_frame_1 - 0.078 12.7 0.0 0.083 12.6 0.0 1.1 1 0 0 1 1 1 0 Starch synthase catalytic domain Peptidase_M3 PF01432.20 NODE_75817_length_208_cov_1.618497_g67876_i0forward_frame_1 - 6.4e-17 61.9 0.0 6.8e-17 61.9 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M3 ComFB PF10719.9 NODE_75814_length_208_cov_1.664740_g67873_i0reverse_frame_1 - 0.0084 16.2 0.4 0.013 15.5 0.4 1.4 1 1 0 1 1 1 1 Late competence development protein ComFB DS PF01916.17 NODE_75808_length_208_cov_1.687861_g67867_i0reverse_frame_1 - 0.17 11.1 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Deoxyhypusine synthase Arg_repressor PF01316.21 NODE_75802_length_208_cov_1.722543_g67861_i0reverse_frame_1 - 0.00062 19.5 0.0 0.00085 19.0 0.0 1.2 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain DUF494 PF04361.13 NODE_75802_length_208_cov_1.722543_g67861_i0reverse_frame_1 - 0.19 11.6 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF494) UL2 PF08196.11 NODE_75800_length_208_cov_1.757225_g67859_i0reverse_frame_1 - 0.12 12.4 1.5 0.18 11.8 1.5 1.4 1 0 0 1 1 1 0 UL2 protein DUF3772 PF12607.8 NODE_75797_length_208_cov_1.791908_g67856_i0forward_frame_1 - 0.072 12.9 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) Yos1 PF08571.10 NODE_75795_length_208_cov_1.815029_g67854_i0reverse_frame_1 - 0.14 12.5 0.1 0.14 12.5 0.1 1.2 1 0 0 1 1 1 0 Yos1-like zf-Tim10_DDP PF02953.15 NODE_75789_length_208_cov_1.838150_g67848_i0reverse_frame_1 - 2e-09 37.0 2.5 2.2e-09 36.8 2.5 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Prominin PF05478.11 NODE_75785_length_208_cov_1.849711_g67844_i0reverse_frame_1 - 0.016 13.2 1.0 0.017 13.1 1.0 1.0 1 0 0 1 1 1 0 Prominin DNA_pol_viral_C PF00336.18 NODE_75778_length_208_cov_1.907514_g67837_i0reverse_frame_1 - 0.085 12.2 0.0 0.085 12.2 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) C-terminal domain RdRP_2 PF00978.21 NODE_75768_length_208_cov_1.976879_g67827_i0forward_frame_1 - 0.0027 16.7 0.8 0.003 16.6 0.8 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase THB PF18362.1 NODE_75767_length_208_cov_1.976879_g67826_i0reverse_frame_1 - 0.12 12.0 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Tri-helix bundle domain DUF4503 PF14951.6 NODE_75767_length_208_cov_1.976879_g67826_i0forward_frame_1 - 0.07 11.6 9.9 0.077 11.5 9.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4503) DUF806 PF05657.11 NODE_75765_length_208_cov_2.000000_g67824_i0reverse_frame_1 - 0.024 15.1 0.1 0.029 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF806) PRRSV_2b PF07069.11 NODE_75753_length_208_cov_2.248555_g67812_i0forward_frame_1 - 7.7 7.1 9.9 0.52 10.9 4.0 1.8 1 1 1 2 2 2 0 Porcine reproductive and respiratory syndrome virus 2b DivIC PF04977.15 NODE_75743_length_208_cov_2.381503_g67802_i0reverse_frame_1 - 0.0019 17.9 0.2 0.0024 17.6 0.2 1.1 1 0 0 1 1 1 1 Septum formation initiator TMF_DNA_bd PF12329.8 NODE_75743_length_208_cov_2.381503_g67802_i0reverse_frame_1 - 0.02 14.9 0.1 0.026 14.5 0.1 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding ZapB PF06005.12 NODE_75743_length_208_cov_2.381503_g67802_i0reverse_frame_1 - 0.043 14.3 0.1 0.057 13.9 0.1 1.3 1 0 0 1 1 1 0 Cell division protein ZapB Poxvirus_B22R_N PF13169.6 NODE_75735_length_208_cov_2.497110_g67794_i0reverse_frame_1 - 0.21 12.1 2.4 0.2 12.2 1.5 1.4 1 1 0 1 1 1 0 Poxvirus B22R protein N-terminal Ank_4 PF13637.6 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 2.3e-05 24.8 0.0 3.9e-05 24.1 0.0 1.4 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 2.3e-05 24.6 0.1 0.002 18.5 0.1 2.2 2 0 0 2 2 2 1 Ankyrin repeat Ank_5 PF13857.6 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 2.6e-05 24.4 0.0 3.6e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 0.0007 20.1 0.0 0.0009 19.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_75731_length_208_cov_2.537572_g67790_i0forward_frame_1 - 0.0011 19.2 0.0 0.009 16.5 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Synaptobrevin PF00957.21 NODE_75729_length_208_cov_2.601156_g67788_i0reverse_frame_1 - 0.76 9.6 4.3 0.96 9.3 4.3 1.1 1 0 0 1 1 1 0 Synaptobrevin RE_Bsp6I PF09504.10 NODE_75726_length_208_cov_2.658960_g67785_i0forward_frame_1 - 0.057 13.0 0.0 0.062 12.9 0.0 1.1 1 0 0 1 1 1 0 Bsp6I restriction endonuclease Imm57 PF15596.6 NODE_75725_length_208_cov_2.820809_g67784_i0forward_frame_1 - 1.3e-39 134.9 1.2 1.4e-39 134.8 1.2 1.0 1 0 0 1 1 1 1 Immunity protein 57 DHC_N1 PF08385.12 NODE_75725_length_208_cov_2.820809_g67784_i0forward_frame_1 - 0.054 12.1 0.0 0.058 12.0 0.0 1.0 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 1 CBM9_2 PF16011.5 NODE_75719_length_208_cov_3.005780_g67778_i0reverse_frame_1 - 0.063 13.0 0.1 0.072 12.8 0.1 1.2 1 0 0 1 1 1 0 Carbohydrate-binding family 9 Fer4_8 PF13183.6 NODE_75717_length_208_cov_3.086705_g67776_i0forward_frame_1 - 0.9 10.0 11.8 1.1 9.7 11.8 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain Anoctamin PF04547.12 NODE_75710_length_208_cov_3.803468_g67769_i0forward_frame_1 - 3.7e-05 22.8 0.4 4.3e-05 22.6 0.4 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel ATP1G1_PLM_MAT8 PF02038.16 NODE_75708_length_208_cov_3.982659_g67767_i0reverse_frame_1 - 0.12 11.8 0.4 0.24 10.9 0.4 1.4 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family FGFR3_TM PF18123.1 NODE_75708_length_208_cov_3.982659_g67767_i0reverse_frame_1 - 1 9.0 7.3 2.3 7.8 3.5 2.2 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain MyTH4 PF00784.17 NODE_75708_length_208_cov_3.982659_g67767_i0forward_frame_1 - 0.067 13.7 0.2 0.09 13.3 0.2 1.2 1 0 0 1 1 1 0 MyTH4 domain zf-UBR PF02207.20 NODE_75706_length_208_cov_4.601156_g67765_i0forward_frame_1 - 0.0027 17.9 7.3 0.0033 17.6 7.3 1.1 1 0 0 1 1 1 1 Putative zinc finger in N-recognin (UBR box) Defensin_like PF10868.8 NODE_75703_length_208_cov_7.664740_g67762_i0forward_frame_1 - 0.098 13.4 4.6 0.12 13.1 4.6 1.2 1 0 0 1 1 1 0 Cysteine-rich antifungal protein 2, defensin-like zf-RING_2 PF13639.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 2.2e-07 31.1 1.9 2.8e-07 30.8 1.9 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 1.4e-06 28.1 2.8 1.7e-06 27.7 2.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 2.4e-06 27.7 1.4 3.1e-06 27.4 1.4 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 6.6e-06 26.0 1.9 8.9e-06 25.6 1.9 1.2 1 0 0 1 1 1 1 zinc-RING finger domain Rtf2 PF04641.12 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 7.1e-05 22.3 0.3 8.9e-05 22.0 0.3 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-C3HC4 PF00097.25 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.00012 21.9 2.4 0.00016 21.4 2.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.00056 19.9 2.7 0.00099 19.1 2.7 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.0012 18.6 1.1 0.0022 17.7 1.1 1.5 1 0 0 1 1 1 1 RING-like zinc finger UPF0547 PF10571.9 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.0019 18.2 5.8 0.022 14.8 1.2 2.2 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 zf-C3HC4_3 PF13920.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.0028 17.5 1.6 0.0035 17.2 1.6 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.0048 16.5 1.2 0.0076 15.8 1.2 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.0089 15.9 0.6 0.012 15.4 0.6 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING-like PF08746.11 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.021 15.1 2.4 0.032 14.5 2.4 1.3 1 0 0 1 1 1 0 RING-like domain zf-C3HC4_4 PF15227.6 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.022 14.9 1.2 0.038 14.1 1.2 1.4 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.024 14.7 0.4 0.037 14.1 0.4 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zn-ribbon_8 PF09723.10 NODE_75693_length_208_cov_32.028902_g67752_i0forward_frame_1 - 0.034 14.3 0.3 0.049 13.7 0.3 1.4 1 0 0 1 1 1 0 Zinc ribbon domain DUF5531 PF17671.1 NODE_75692_length_208_cov_32.855491_g67751_i0forward_frame_1 - 0.16 11.8 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5531) Tachystatin_A PF11406.8 NODE_75689_length_208_cov_34.653179_g67748_i0forward_frame_1 - 0.077 13.1 0.0 0.65 10.1 0.0 2.0 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A Med19 PF10278.9 NODE_75685_length_208_cov_40.260116_g67744_i0reverse_frame_1 - 0.0014 18.6 0.3 0.0018 18.2 0.3 1.1 1 0 0 1 1 1 1 Mediator of RNA pol II transcription subunit 19 AIB PF15334.6 NODE_75685_length_208_cov_40.260116_g67744_i0reverse_frame_1 - 0.1 11.9 4.2 0.12 11.7 4.2 1.1 1 0 0 1 1 1 0 Aurora kinase A and ninein interacting protein UPF0239 PF06783.11 NODE_75685_length_208_cov_40.260116_g67744_i0reverse_frame_1 - 0.45 10.7 5.7 0.56 10.4 5.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) zf-RING_2 PF13639.6 NODE_75684_length_208_cov_41.127168_g67743_i0forward_frame_1 - 0.0048 17.2 5.6 0.25 11.7 0.8 2.1 1 1 1 2 2 2 2 Ring finger domain Prok-RING_1 PF14446.6 NODE_75684_length_208_cov_41.127168_g67743_i0forward_frame_1 - 0.055 13.4 1.4 0.068 13.1 0.0 1.7 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4_2 PF13923.6 NODE_75684_length_208_cov_41.127168_g67743_i0forward_frame_1 - 0.39 10.6 7.0 1.1 9.2 1.1 2.1 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) NOA36 PF06524.12 NODE_75678_length_208_cov_45.728324_g67737_i0reverse_frame_1 - 3.2 7.0 7.1 3.7 6.8 7.1 1.0 1 0 0 1 1 1 0 NOA36 protein Ribosomal_60s PF00428.19 NODE_75678_length_208_cov_45.728324_g67737_i0reverse_frame_1 - 5.2 7.7 14.6 6.5 7.4 14.6 1.1 1 0 0 1 1 1 0 60s Acidic ribosomal protein Seipin PF06775.14 NODE_75668_length_208_cov_52.132948_g67727_i0reverse_frame_1 - 0.059 13.5 0.1 0.061 13.4 0.1 1.0 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) DUF269 PF03270.13 NODE_75667_length_208_cov_53.138728_g67726_i0forward_frame_1 - 0.012 15.7 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF269 RNA_polI_A34 PF08208.11 NODE_75666_length_208_cov_53.433526_g67725_i0reverse_frame_1 - 0.081 13.0 10.4 0.083 13.0 10.4 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF624 PF04854.14 NODE_75664_length_208_cov_59.242775_g67723_i0reverse_frame_1 - 0.048 13.8 1.3 0.063 13.4 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF624 FOP_dimer PF09398.10 NODE_75664_length_208_cov_59.242775_g67723_i0reverse_frame_1 - 0.055 13.7 0.1 0.078 13.2 0.1 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain Glucos_trans_II PF14264.6 NODE_75664_length_208_cov_59.242775_g67723_i0reverse_frame_1 - 0.064 12.6 5.1 0.067 12.5 5.1 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII TPKR_C2 PF16920.5 NODE_75660_length_208_cov_65.468208_g67719_i0forward_frame_1 - 0.049 13.8 0.0 12 6.1 0.0 2.3 2 0 0 2 2 2 0 Tyrosine-protein kinase receptor C2 Ig-like domain zf-RING_2 PF13639.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 5.1e-10 39.5 1.4 5.1e-10 39.5 1.4 1.6 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 1.6e-09 37.9 2.3 2.4e-09 37.3 2.3 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 6.5e-08 32.3 3.4 9.6e-08 31.8 3.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 1.5e-07 31.2 1.7 2.3e-07 30.6 1.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 1.1e-05 25.4 1.0 1.4e-05 25.0 1.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.00014 21.5 0.2 0.00014 21.5 0.2 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.00016 21.5 1.2 0.00025 20.8 1.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0004 20.3 1.3 0.00069 19.5 1.3 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.00068 19.6 2.6 0.00068 19.6 2.6 1.9 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0013 18.9 1.0 0.0022 18.1 1.0 1.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0018 18.1 4.3 0.0027 17.6 4.3 1.3 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 Zn-ribbon_8 PF09723.10 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0047 17.0 2.2 0.0059 16.7 1.2 1.7 2 1 0 2 2 2 1 Zinc ribbon domain Zn_ribbon_17 PF17120.5 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0056 16.3 6.6 0.0082 15.7 6.6 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-Nse PF11789.8 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.0096 15.7 0.8 0.014 15.2 0.8 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit FANCL_C PF11793.8 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.014 15.6 1.1 0.014 15.6 1.1 2.1 1 1 1 2 2 2 0 FANCL C-terminal domain zf-RING-like PF08746.11 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.032 14.5 3.0 0.032 14.5 3.0 1.6 2 0 0 2 2 2 0 RING-like domain TerY_C PF15616.6 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.038 14.1 0.6 0.042 14.0 0.6 1.2 1 0 0 1 1 1 0 TerY-C metal binding domain RINGv PF12906.7 NODE_75656_length_208_cov_70.468208_g67715_i0forward_frame_1 - 0.84 9.8 8.9 0.19 11.9 4.2 2.0 2 0 0 2 2 2 0 RING-variant domain Connexin PF00029.19 NODE_75652_length_208_cov_85.895954_g67711_i0forward_frame_1 - 0.098 12.4 0.2 0.14 11.9 0.2 1.3 1 0 0 1 1 1 0 Connexin SelK_SelG PF10961.8 NODE_75649_length_208_cov_95.774566_g67708_i0forward_frame_1 - 0.14 12.8 0.0 0.16 12.6 0.0 1.1 1 0 0 1 1 1 0 Selenoprotein SelK_SelG ResB PF05140.14 NODE_75649_length_208_cov_95.774566_g67708_i0forward_frame_1 - 0.26 10.0 0.0 0.28 9.9 0.0 1.0 1 0 0 1 1 1 0 ResB-like family CHASE7 PF17151.4 NODE_75646_length_208_cov_122.722543_g67705_i0reverse_frame_1 - 0.15 11.7 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Periplasmic sensor domain GP3 PF03076.14 NODE_75633_length_208_cov_297.757225_g67692_i0forward_frame_1 - 1.8 8.6 7.7 2.2 8.3 7.7 1.4 1 1 0 1 1 1 0 Equine arteritis virus GP3 Sporozoite_P67 PF05642.11 NODE_75628_length_208_cov_6129.647399_g67687_i0reverse_frame_1 - 2.9 5.9 4.2 2.9 5.8 4.2 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen OrfB_Zn_ribbon PF07282.11 NODE_75628_length_208_cov_6129.647399_g67687_i0reverse_frame_1 - 3 7.8 5.6 4.9 7.1 5.6 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain TDRP PF15683.5 NODE_75628_length_208_cov_6129.647399_g67687_i0forward_frame_1 - 0.009 16.0 0.4 0.011 15.8 0.4 1.0 1 0 0 1 1 1 1 Testis development-related protein UPF0239 PF06783.11 NODE_75628_length_208_cov_6129.647399_g67687_i0forward_frame_1 - 0.059 13.6 1.2 0.069 13.3 1.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) TerC PF03741.16 NODE_75621_length_209_cov_0.810345_g67680_i0reverse_frame_1 - 0.002 17.8 0.0 0.0023 17.7 0.0 1.2 1 0 0 1 1 1 1 Integral membrane protein TerC family R_equi_Vir PF05526.11 NODE_75621_length_209_cov_0.810345_g67680_i0reverse_frame_1 - 0.11 12.3 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Rhodococcus equi virulence-associated protein DFRP_C PF16543.5 NODE_75614_length_209_cov_0.908046_g67673_i0reverse_frame_1 - 6.5e-10 39.4 4.1 8e-10 39.1 4.1 1.1 1 0 0 1 1 1 1 DRG Family Regulatory Proteins, Tma46 Acid_phosphat_B PF03767.14 NODE_75614_length_209_cov_0.908046_g67673_i0reverse_frame_1 - 0.0077 15.8 0.2 0.0086 15.7 0.2 1.0 1 0 0 1 1 1 1 HAD superfamily, subfamily IIIB (Acid phosphatase) Mucin PF01456.17 NODE_75608_length_209_cov_0.913793_g67667_i0reverse_frame_1 - 0.4 10.7 3.0 0.47 10.4 3.0 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein Acetyltransf_16 PF05301.11 NODE_75604_length_209_cov_0.913793_g67663_i0reverse_frame_1 - 0.00045 20.0 0.0 0.00046 20.0 0.0 1.0 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 ACOX PF01756.19 NODE_75595_length_209_cov_0.919540_g67654_i0reverse_frame_1 - 0.007 15.9 0.1 0.0074 15.9 0.1 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase zf-C6H2 PF15801.5 NODE_75594_length_209_cov_0.919540_g67653_i0reverse_frame_1 - 0.03 14.6 1.4 0.047 14.0 1.4 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding PGG PF13962.6 NODE_75593_length_209_cov_0.919540_g67652_i0reverse_frame_1 - 0.072 12.9 0.6 0.074 12.9 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function BRCA-2_OB1 PF09103.10 NODE_75592_length_209_cov_0.919540_g67651_i0reverse_frame_1 - 0.14 12.2 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 Ald_Xan_dh_C2 PF02738.18 NODE_75584_length_209_cov_0.919540_g67643_i0forward_frame_1 - 0.13 10.7 0.2 0.14 10.6 0.2 1.0 1 0 0 1 1 1 0 Molybdopterin-binding domain of aldehyde dehydrogenase ATP-synt_S1 PF05827.12 NODE_75582_length_209_cov_0.919540_g67641_i0forward_frame_1 - 0.098 12.5 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) Phage_holin_3_6 PF07332.11 NODE_75581_length_209_cov_0.919540_g67640_i0forward_frame_1 - 0.35 10.9 11.5 0.46 10.5 11.5 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF4191 PF13829.6 NODE_75581_length_209_cov_0.919540_g67640_i0forward_frame_1 - 4.4 6.6 10.2 4.7 6.5 10.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) MRP_L53 PF10780.9 NODE_75579_length_209_cov_0.919540_g67638_i0reverse_frame_1 - 0.1 12.8 0.3 0.16 12.2 0.1 1.5 2 0 0 2 2 2 0 39S ribosomal protein L53/MRP-L53 FAM176 PF14851.6 NODE_75573_length_209_cov_0.919540_g67632_i0reverse_frame_1 - 1 9.0 5.4 1.1 8.9 5.4 1.0 1 0 0 1 1 1 0 FAM176 family DUF5351 PF17302.2 NODE_75572_length_209_cov_0.919540_g67631_i0forward_frame_1 - 0.024 14.8 0.3 0.024 14.8 0.3 2.8 3 1 0 3 3 3 0 Family of unknown function (DUF5351) cNMP_binding PF00027.29 NODE_75570_length_209_cov_0.948276_g67629_i0forward_frame_1 - 6.1e-05 23.0 0.0 8.3e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Phage_Coat_Gp8 PF05371.12 NODE_75567_length_209_cov_0.977011_g67626_i0forward_frame_1 - 0.17 11.7 0.1 0.24 11.2 0.1 1.2 1 0 0 1 1 1 0 Phage major coat protein, Gp8 Abhydro_lipase PF04083.16 NODE_75548_length_209_cov_1.103448_g67607_i0forward_frame_1 - 0.22 11.2 0.2 0.22 11.2 0.2 1.4 2 0 0 2 2 2 0 Partial alpha/beta-hydrolase lipase region Lamprin PF06403.11 NODE_75546_length_209_cov_1.103448_g67605_i0reverse_frame_1 - 0.016 15.2 0.6 0.016 15.2 0.6 1.1 1 0 0 1 1 1 0 Lamprin DUF2501 PF10696.9 NODE_75544_length_209_cov_1.132184_g67603_i0forward_frame_1 - 0.067 13.5 0.0 0.087 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2501) Glyco_tranf_2_5 PF13712.6 NODE_75542_length_209_cov_1.137931_g67601_i0reverse_frame_1 - 0.049 13.3 0.1 0.049 13.3 0.1 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family Med13_C PF06333.12 NODE_75539_length_209_cov_1.143678_g67598_i0reverse_frame_1 - 0.013 14.7 0.1 0.015 14.6 0.1 1.0 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain Gemini_AL2 PF01440.16 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_1 - 0.14 12.6 3.7 0.18 12.3 3.7 1.2 1 0 0 1 1 1 0 Geminivirus AL2 protein Kelch_1 PF01344.25 NODE_75533_length_209_cov_1.149425_g67592_i0reverse_frame_1 - 0.0016 18.0 0.3 0.0071 15.9 0.3 1.9 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 NODE_75533_length_209_cov_1.149425_g67592_i0reverse_frame_1 - 0.11 12.8 0.1 0.37 11.2 0.1 1.8 2 0 0 2 2 2 0 Kelch motif Integrin_b_cyt PF08725.11 NODE_75533_length_209_cov_1.149425_g67592_i0forward_frame_1 - 0.13 11.9 0.1 0.19 11.4 0.1 1.2 1 0 0 1 1 1 0 Integrin beta cytoplasmic domain zf-C2H2_7 PF15269.6 NODE_75532_length_209_cov_1.149425_g67591_i0forward_frame_1 - 0.073 13.2 3.5 0.11 12.6 3.5 1.3 1 0 0 1 1 1 0 Zinc-finger Mucin PF01456.17 NODE_75529_length_209_cov_1.166667_g67588_i0reverse_frame_1 - 4.4 7.3 7.6 5.6 6.9 0.5 2.2 2 0 0 2 2 2 0 Mucin-like glycoprotein DUF4220 PF13968.6 NODE_75529_length_209_cov_1.166667_g67588_i0forward_frame_1 - 0.048 13.1 0.0 0.052 12.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) FERM_f0 PF16511.5 NODE_75518_length_209_cov_1.270115_g67577_i0forward_frame_1 - 0.041 14.2 0.1 0.064 13.6 0.1 1.3 1 1 0 1 1 1 0 N-terminal or F0 domain of Talin-head FERM RTTN_N PF14726.6 NODE_75502_length_209_cov_1.373563_g67561_i0reverse_frame_1 - 0.036 14.9 1.2 0.039 14.8 1.2 1.1 1 0 0 1 1 1 0 Rotatin, an armadillo repeat protein, centriole functioning tRNA-synt_2 PF00152.20 NODE_75498_length_209_cov_1.379310_g67557_i0forward_frame_1 - 0.078 12.0 0.0 0.086 11.9 0.0 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) NTR PF01759.21 NODE_75496_length_209_cov_1.379310_g67555_i0forward_frame_1 - 0.11 12.3 0.2 0.13 12.1 0.2 1.0 1 0 0 1 1 1 0 UNC-6/NTR/C345C module zf-CGNR PF11706.8 NODE_75494_length_209_cov_1.379310_g67553_i0reverse_frame_1 - 0.19 11.6 2.9 4.8 7.1 0.1 2.2 2 0 0 2 2 2 0 CGNR zinc finger Phage_Orf51 PF06194.11 NODE_75494_length_209_cov_1.379310_g67553_i0forward_frame_1 - 0.024 14.6 0.0 0.032 14.2 0.0 1.2 1 0 0 1 1 1 0 Phage Conserved Open Reading Frame 51 TrkA_TMD PF18613.1 NODE_75494_length_209_cov_1.379310_g67553_i0forward_frame_1 - 3.6 7.1 5.0 7.9 6.0 5.0 1.5 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain RMI1_N PF08585.12 NODE_75490_length_209_cov_1.379310_g67549_i0reverse_frame_1 - 3.3e-10 40.1 0.0 3.8e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 RecQ mediated genome instability protein GCV_T_C PF08669.11 NODE_75485_length_209_cov_1.379310_g67544_i0forward_frame_1 - 0.041 13.8 0.3 0.059 13.3 0.3 1.2 1 0 0 1 1 1 0 Glycine cleavage T-protein C-terminal barrel domain HSP90 PF00183.18 NODE_75484_length_209_cov_1.379310_g67543_i0reverse_frame_1 - 0.057 12.3 0.0 0.063 12.2 0.0 1.0 1 0 0 1 1 1 0 Hsp90 protein Macscav_rec PF03523.13 NODE_75483_length_209_cov_1.385057_g67542_i0reverse_frame_1 - 0.082 12.8 0.0 0.15 11.9 0.0 1.5 1 1 0 1 1 1 0 Macrophage scavenger receptor SBP PF03110.14 NODE_75481_length_209_cov_1.402299_g67540_i0reverse_frame_1 - 0.11 12.8 3.0 0.19 12.0 0.1 2.0 1 1 1 2 2 2 0 SBP domain Pox_A12 PF04651.13 NODE_75481_length_209_cov_1.402299_g67540_i0forward_frame_1 - 0.044 13.8 1.7 0.045 13.8 1.7 1.2 1 0 0 1 1 1 0 Poxvirus A12 protein IF4E PF01652.18 NODE_75481_length_209_cov_1.402299_g67540_i0forward_frame_1 - 0.055 13.3 0.1 0.06 13.1 0.1 1.1 1 0 0 1 1 1 0 Eukaryotic initiation factor 4E # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks384.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks384.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks384.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks384.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:33:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- OrfB_IS605 PF01385.19 NODE_75471_length_209_cov_1.448276_g67530_i0reverse_frame_1 - 1.5 9.1 3.8 1.6 9.0 3.8 1.1 1 0 0 1 1 1 0 Probable transposase Herpes_pp85 PF04637.12 NODE_75465_length_209_cov_1.494253_g67524_i0forward_frame_1 - 8.1 4.7 6.0 8.4 4.7 4.8 1.6 1 1 1 2 2 2 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF4762 PF15959.5 NODE_75463_length_209_cov_1.494253_g67522_i0reverse_frame_1 - 0.43 10.6 4.2 0.62 10.1 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4762) RANK_CRD_2 PF18278.1 NODE_75454_length_209_cov_1.551724_g67513_i0forward_frame_1 - 0.054 13.6 2.7 0.054 13.6 2.7 1.5 2 0 0 2 2 2 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 Lactamase_B PF00753.27 NODE_75451_length_209_cov_1.580460_g67510_i0forward_frame_1 - 0.038 14.0 0.0 0.042 13.8 0.0 1.0 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily MHC_I_3 PF16497.5 NODE_75450_length_209_cov_1.586207_g67509_i0reverse_frame_1 - 0.073 12.6 0.0 0.077 12.5 0.0 1.0 1 0 0 1 1 1 0 MHC-I family domain Lamprin PF06403.11 NODE_75438_length_209_cov_1.626437_g67497_i0forward_frame_1 - 0.054 13.5 4.2 0.066 13.2 4.2 1.2 1 0 0 1 1 1 0 Lamprin Syntaxin-6_N PF09177.11 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.0022 18.5 0.6 0.0023 18.4 0.6 1.0 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DivIC PF04977.15 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.013 15.2 5.0 0.019 14.7 5.0 1.3 1 0 0 1 1 1 0 Septum formation initiator GrpE PF01025.19 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.014 15.0 1.5 0.014 15.0 1.5 1.1 1 0 0 1 1 1 0 GrpE KAP_NTPase PF07693.14 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.028 13.7 0.4 0.029 13.6 0.4 1.0 1 0 0 1 1 1 0 KAP family P-loop domain Fib_alpha PF08702.10 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.044 14.0 1.3 0.05 13.8 1.3 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family AMH_N PF04709.12 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.069 12.0 0.7 0.076 11.9 0.7 1.0 1 0 0 1 1 1 0 Anti-Mullerian hormone, N terminal region DUF848 PF05852.11 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 0.071 13.2 3.4 0.077 13.1 3.4 1.0 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) CCDC-167 PF15188.6 NODE_75435_length_209_cov_1.655172_g67494_i0forward_frame_1 - 2.8 8.4 8.2 5.3 7.5 1.5 2.0 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 UPF0051 PF01458.17 NODE_75430_length_209_cov_1.706897_g67489_i0forward_frame_1 - 1.2e-17 64.4 0.3 1.2e-17 64.3 0.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Nsp1_C PF05064.13 NODE_75422_length_209_cov_1.752874_g67481_i0forward_frame_1 - 0.015 15.1 2.4 0.2 11.5 0.5 2.0 1 1 1 2 2 2 0 Nsp1-like C-terminal region DUF4527 PF15030.6 NODE_75410_length_209_cov_1.816092_g67469_i0forward_frame_1 - 0.016 14.6 0.2 0.018 14.5 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) ADH_N_assoc PF13823.6 NODE_75408_length_209_cov_1.821839_g67467_i0forward_frame_1 - 0.3 11.0 1.8 0.49 10.4 1.8 1.3 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-associated PEP-CTERM PF07589.11 NODE_75404_length_209_cov_1.844828_g67463_i0reverse_frame_1 - 1.2 9.3 6.2 0.49 10.6 2.1 2.1 2 0 0 2 2 2 0 PEP-CTERM motif RuBisCO_large_N PF02788.16 NODE_75397_length_209_cov_1.873563_g67456_i0reverse_frame_1 - 0.033 14.3 0.0 0.038 14.2 0.0 1.1 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, N-terminal domain DUF1409 PF07197.12 NODE_75392_length_209_cov_1.925287_g67451_i0forward_frame_1 - 0.022 14.6 0.0 0.035 14.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1409) Imm43 PF15570.6 NODE_75391_length_209_cov_1.931034_g67450_i0reverse_frame_1 - 0.081 13.0 1.0 0.12 12.4 0.5 1.5 1 1 1 2 2 2 0 Immunity protein 43 DUF4774 PF15999.5 NODE_75390_length_209_cov_1.936782_g67449_i0forward_frame_1 - 0.023 14.5 0.2 0.035 13.9 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4774) Prefoldin PF02996.17 NODE_75385_length_209_cov_2.011494_g67444_i0forward_frame_1 - 0.06 13.3 0.0 0.071 13.0 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit zf-UBP_var PF17807.1 NODE_75375_length_209_cov_2.097701_g67434_i0forward_frame_1 - 0.26 11.1 0.4 0.26 11.1 0.4 1.7 2 0 0 2 2 2 0 Variant UBP zinc finger LMWPc PF01451.21 NODE_75362_length_209_cov_2.275862_g67421_i0reverse_frame_1 - 5.2e-06 26.9 0.0 6.9e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase zf-P11 PF03854.14 NODE_75360_length_209_cov_2.293103_g67419_i0reverse_frame_1 - 0.13 11.9 1.7 0.13 11.9 0.2 1.7 2 0 0 2 2 2 0 P-11 zinc finger WGR PF05406.15 NODE_75357_length_209_cov_2.339080_g67416_i0reverse_frame_1 - 4.9e-11 42.5 0.2 5.6e-11 42.4 0.2 1.1 1 0 0 1 1 1 1 WGR domain Rad1 PF02144.16 NODE_75350_length_209_cov_2.557471_g67409_i0reverse_frame_1 - 0.096 11.7 0.1 0.2 10.7 0.0 1.5 1 1 1 2 2 2 0 Repair protein Rad1/Rec1/Rad17 zf-RING_5 PF14634.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 3.6e-10 39.6 11.7 4.6e-10 39.3 11.7 1.1 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 5e-08 33.1 10.8 7.8e-08 32.5 10.8 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 1.8e-07 30.9 10.2 2.5e-07 30.5 10.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 4.6e-07 29.8 6.2 8.6e-07 28.9 6.2 1.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 1.6e-05 24.7 13.8 2.6e-05 24.0 13.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 8.6e-05 22.3 7.9 0.00016 21.5 7.9 1.4 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.00027 20.6 4.4 0.00027 20.6 4.4 2.1 1 1 1 2 2 2 1 RING-like zinc finger zf-C3HC4_4 PF15227.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.0011 19.1 14.5 0.0044 17.1 14.5 1.9 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.0036 17.1 11.6 0.0068 16.2 11.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.41 11.0 11.0 0.25 11.7 8.4 1.9 1 1 1 2 2 2 0 RING-H2 zinc finger domain zf-RING_4 PF14570.6 NODE_75350_length_209_cov_2.557471_g67409_i0forward_frame_1 - 0.8 9.6 11.6 2 8.2 11.6 1.7 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain CHZ PF09649.10 NODE_75347_length_209_cov_2.597701_g67406_i0reverse_frame_1 - 0.19 11.2 3.9 0.4 10.2 0.3 2.1 2 0 0 2 2 2 0 Histone chaperone domain CHZ PDR_CDR PF06422.12 NODE_75347_length_209_cov_2.597701_g67406_i0forward_frame_1 - 0.12 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 CDR ABC transporter HTH_33 PF13592.6 NODE_75346_length_209_cov_2.614943_g67405_i0forward_frame_1 - 0.0077 15.8 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix Motilin_assoc PF04643.12 NODE_75346_length_209_cov_2.614943_g67405_i0forward_frame_1 - 0.026 14.4 0.0 0.038 13.8 0.0 1.2 1 0 0 1 1 1 0 Motilin/ghrelin-associated peptide Extensin-like_C PF06904.12 NODE_75346_length_209_cov_2.614943_g67405_i0forward_frame_1 - 0.054 13.5 0.0 0.061 13.4 0.0 1.0 1 0 0 1 1 1 0 Extensin-like protein C-terminus Sushi_2 PF09014.10 NODE_75341_length_209_cov_2.775862_g67400_i0reverse_frame_1 - 0.016 15.0 3.2 0.021 14.7 3.2 1.1 1 0 0 1 1 1 0 Beta-2-glycoprotein-1 fifth domain DUF1319 PF07028.11 NODE_75340_length_209_cov_2.810345_g67399_i0forward_frame_1 - 0.01 16.1 0.3 0.012 15.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1319) Red1 PF07964.11 NODE_75339_length_209_cov_2.821839_g67398_i0forward_frame_1 - 0.026 12.8 0.0 0.029 12.6 0.0 1.0 1 0 0 1 1 1 0 Rec10 / Red1 zf-C3HC4 PF00097.25 NODE_75339_length_209_cov_2.821839_g67398_i0forward_frame_1 - 2.7 8.0 7.6 0.6 10.0 2.0 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF2218 PF09981.9 NODE_75338_length_209_cov_2.821839_g67397_i0forward_frame_1 - 0.13 12.6 0.9 0.17 12.3 0.9 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2218) RecR PF02132.15 NODE_75334_length_209_cov_2.977011_g67393_i0forward_frame_1 - 0.0021 17.6 1.4 0.0079 15.7 1.4 1.9 1 1 0 1 1 1 1 RecR protein JTB PF05439.12 NODE_75334_length_209_cov_2.977011_g67393_i0forward_frame_1 - 0.0085 16.1 1.0 0.0095 16.0 1.0 1.0 1 0 0 1 1 1 1 Jumping translocation breakpoint protein (JTB) zf-C3HC4_3 PF13920.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 3.3e-09 36.5 9.5 3.3e-09 36.5 9.5 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 4e-06 26.6 13.7 1e-05 25.3 12.0 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 1.4e-05 25.3 11.9 1.4e-05 25.3 11.9 1.6 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.00019 21.2 11.5 0.00081 19.2 9.9 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.0076 16.2 13.9 0.0091 15.9 5.3 2.4 2 1 0 2 2 2 2 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.052 13.4 13.8 0.28 11.1 12.8 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.22 11.3 13.4 10 6.0 13.0 2.2 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 0.96 9.7 11.5 0.91 9.7 8.3 2.4 2 1 1 3 3 3 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 NODE_75322_length_209_cov_4.247126_g67381_i0reverse_frame_1 - 1.1 9.3 12.4 0.86 9.7 3.6 3.1 3 1 0 3 3 3 0 RING-type zinc-finger SWIRM-assoc_2 PF16496.5 NODE_75315_length_209_cov_18.603448_g67374_i0forward_frame_1 - 0.31 9.9 10.7 0.31 9.9 10.7 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal UPF0767 PF15990.5 NODE_75315_length_209_cov_18.603448_g67374_i0forward_frame_1 - 1.4 9.2 5.5 29 4.9 5.5 2.0 1 1 0 1 1 1 0 UPF0767 family TPR_7 PF13176.6 NODE_75313_length_209_cov_27.189655_g67372_i0forward_frame_1 - 0.038 14.0 0.2 0.2 11.8 0.1 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat DUF4337 PF14235.6 NODE_75313_length_209_cov_27.189655_g67372_i0forward_frame_1 - 7.8 6.6 10.2 8.5 6.5 10.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) UXS1_N PF11803.8 NODE_75311_length_209_cov_27.770115_g67370_i0reverse_frame_1 - 0.05 14.0 0.0 0.056 13.8 0.0 1.1 1 0 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal DUF3437 PF11919.8 NODE_75298_length_209_cov_39.201149_g67357_i0reverse_frame_1 - 0.18 11.8 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) HicB-like_2 PF15970.5 NODE_75298_length_209_cov_39.201149_g67357_i0forward_frame_1 - 0.053 13.7 0.2 0.053 13.7 0.2 1.1 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system ARL17 PF15840.5 NODE_75297_length_209_cov_39.408046_g67356_i0reverse_frame_1 - 0.76 10.2 6.2 0.53 10.7 4.4 1.6 1 1 1 2 2 2 0 ADP-ribosylation factor-like protein 17 NUDIX_5 PF16705.5 NODE_75294_length_209_cov_44.097701_g67353_i0reverse_frame_1 - 0.054 13.3 0.9 0.08 12.7 0.9 1.3 1 0 0 1 1 1 0 NUDIX, or N-terminal NPxY motif-rich, region of KRIT SLATT_5 PF18160.1 NODE_75294_length_209_cov_44.097701_g67353_i0forward_frame_1 - 9.4 5.5 15.3 11 5.2 15.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 DUF523 PF04463.12 NODE_75289_length_209_cov_47.413793_g67348_i0reverse_frame_1 - 0.1 12.6 0.2 0.15 12.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF523) NinF PF05810.12 NODE_75285_length_209_cov_52.086207_g67344_i0reverse_frame_1 - 0.0085 15.9 0.1 0.01 15.7 0.1 1.2 1 0 0 1 1 1 1 NinF protein YqgC PF17430.2 NODE_75284_length_209_cov_52.218391_g67343_i0forward_frame_1 - 0.077 13.1 0.1 0.097 12.8 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized YqgC-like SID-1_RNA_chan PF13965.6 NODE_75282_length_209_cov_52.919540_g67341_i0reverse_frame_1 - 0.41 9.0 3.9 0.43 8.9 3.9 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 FadR_C PF07840.12 NODE_75270_length_209_cov_68.465517_g67329_i0forward_frame_1 - 0.093 12.6 1.1 0.1 12.5 1.1 1.1 1 0 0 1 1 1 0 FadR C-terminal domain Ada3 PF10198.9 NODE_75264_length_209_cov_81.442529_g67323_i0forward_frame_1 - 0.056 13.6 4.3 0.063 13.4 4.3 1.1 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 NVEALA PF14055.6 NODE_75263_length_209_cov_84.149425_g67322_i0reverse_frame_1 - 0.18 11.8 0.1 0.27 11.3 0.1 1.2 1 0 0 1 1 1 0 NVEALA protein DUF5074 PF16819.5 NODE_75256_length_209_cov_145.948276_g67315_i0reverse_frame_1 - 0.055 13.5 0.1 0.061 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5074) HRM PF02793.22 NODE_75251_length_209_cov_225.011494_g67310_i0forward_frame_1 - 0.011 16.0 1.7 0.017 15.4 1.5 1.3 1 1 0 1 1 1 0 Hormone receptor domain FixP_N PF14715.6 NODE_75241_length_209_cov_28542.275862_g67300_i0forward_frame_1 - 3.2 7.5 6.7 1.1 9.1 1.2 2.1 1 1 1 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Thiolase_C PF02803.18 NODE_75237_length_210_cov_0.828571_g67296_i0forward_frame_1 - 0.2 11.3 1.0 10 5.8 0.1 2.0 1 1 1 2 2 2 0 Thiolase, C-terminal domain Cas_Cmr3 PF09700.10 NODE_75231_length_210_cov_0.902857_g67290_i0forward_frame_1 - 0.058 12.8 0.1 0.07 12.5 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr3) DUF3915 PF13054.6 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_1 - 0.11 12.4 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) BES1_N PF05687.13 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_1 - 0.23 11.8 1.0 0.27 11.6 1.0 1.1 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal Atrophin-1 PF03154.15 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_1 - 3.4 5.8 3.8 4.1 5.6 3.8 1.0 1 0 0 1 1 1 0 Atrophin-1 family PMBR PF09373.10 NODE_75206_length_210_cov_0.931429_g67265_i0forward_frame_1 - 0.041 14.0 0.4 0.094 12.9 0.1 1.8 2 0 0 2 2 2 0 Pseudomurein-binding repeat DUF4609 PF15382.6 NODE_75201_length_210_cov_0.994286_g67260_i0reverse_frame_1 - 0.091 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4609) TRAP_beta PF05753.14 NODE_75197_length_210_cov_1.051429_g67256_i0forward_frame_1 - 0.16 11.4 1.1 0.21 11.0 1.1 1.0 1 0 0 1 1 1 0 Translocon-associated protein beta (TRAPB) Tmemb_9 PF05434.11 NODE_75197_length_210_cov_1.051429_g67256_i0forward_frame_1 - 0.35 10.7 1.6 0.41 10.5 1.6 1.1 1 0 0 1 1 1 0 TMEM9 NUDIX_4 PF14815.6 NODE_75194_length_210_cov_1.062857_g67253_i0forward_frame_1 - 0.13 12.3 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 NUDIX domain Mt_ATP-synt_D PF05873.12 NODE_75186_length_210_cov_1.102857_g67245_i0reverse_frame_1 - 0.0027 17.6 1.8 0.003 17.4 1.8 1.0 1 0 0 1 1 1 1 ATP synthase D chain, mitochondrial (ATP5H) TMEM169 PF15052.6 NODE_75186_length_210_cov_1.102857_g67245_i0forward_frame_1 - 0.7 10.0 5.6 0.79 9.9 5.6 1.0 1 0 0 1 1 1 0 TMEM169 protein family Nudix_N_2 PF14803.6 NODE_75177_length_210_cov_1.142857_g67236_i0reverse_frame_1 - 0.083 12.8 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Nudix N-terminal RPAP2_Rtr1 PF04181.13 NODE_75177_length_210_cov_1.142857_g67236_i0forward_frame_1 - 0.016 15.5 0.1 0.018 15.4 0.1 1.2 1 0 0 1 1 1 0 Rtr1/RPAP2 family TcA_TcB_BD PF18276.1 NODE_75172_length_210_cov_1.142857_g67231_i0forward_frame_1 - 0.056 12.5 0.0 0.062 12.4 0.0 1.0 1 0 0 1 1 1 0 Tc toxin complex TcA C-terminal TcB-binding domain Peptidase_C97 PF05903.14 NODE_75169_length_210_cov_1.142857_g67228_i0reverse_frame_1 - 0.0084 15.9 0.1 0.0088 15.9 0.1 1.1 1 0 0 1 1 1 1 PPPDE putative peptidase domain Effector_1 PF04518.12 NODE_75169_length_210_cov_1.142857_g67228_i0forward_frame_1 - 0.26 10.3 0.6 0.28 10.2 0.6 1.0 1 0 0 1 1 1 0 Effector from type III secretion system DUF444 PF04285.12 NODE_75163_length_210_cov_1.211429_g67222_i0reverse_frame_1 - 1.1e-17 64.3 0.2 1.1e-17 64.2 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF444) Stk19 PF10494.9 NODE_75160_length_210_cov_1.228571_g67219_i0forward_frame_1 - 0.091 12.4 0.0 0.091 12.4 0.0 1.0 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 LisH PF08513.11 NODE_75158_length_210_cov_1.245714_g67217_i0reverse_frame_1 - 0.16 12.0 0.4 0.23 11.5 0.4 1.2 1 0 0 1 1 1 0 LisH NDC10_II PF16787.5 NODE_75158_length_210_cov_1.245714_g67217_i0forward_frame_1 - 0.22 10.6 0.1 0.25 10.4 0.1 1.0 1 0 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit, domain 2 Rubella_Capsid PF05750.11 NODE_75157_length_210_cov_1.257143_g67216_i0reverse_frame_1 - 0.41 10.2 8.5 0.45 10.1 8.5 1.0 1 0 0 1 1 1 0 Rubella capsid protein Mob_Pre PF01076.19 NODE_75156_length_210_cov_1.262857_g67215_i0reverse_frame_1 - 0.024 14.5 0.6 0.027 14.3 0.6 1.0 1 0 0 1 1 1 0 Plasmid recombination enzyme Peptidase_S68 PF10461.9 NODE_75156_length_210_cov_1.262857_g67215_i0forward_frame_1 - 4.7 7.5 5.3 14 5.9 0.3 2.2 1 1 1 2 2 2 0 Peptidase S68 HTH_AsnC-type PF13404.6 NODE_75151_length_210_cov_1.342857_g67210_i0reverse_frame_1 - 0.2 11.5 0.8 0.34 10.8 0.3 1.6 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DUF1658 PF07871.11 NODE_75150_length_210_cov_1.348571_g67209_i0reverse_frame_1 - 0.092 12.7 1.6 4.3 7.4 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) Phage_holin_3_3 PF16083.5 NODE_75147_length_210_cov_1.360000_g67206_i0forward_frame_1 - 0.51 10.5 6.0 0.68 10.1 5.8 1.3 1 1 0 1 1 1 0 LydA holin phage, holin superfamily III UPA PF17217.3 NODE_75146_length_210_cov_1.360000_g67205_i0forward_frame_1 - 0.06 13.2 0.1 0.061 13.2 0.1 1.1 1 0 0 1 1 1 0 UPA domain Pkinase PF00069.25 NODE_75141_length_210_cov_1.365714_g67200_i0reverse_frame_1 - 7.6e-13 48.4 0.0 8.1e-13 48.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_75141_length_210_cov_1.365714_g67200_i0reverse_frame_1 - 1.3e-05 24.6 0.0 1.4e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase polyprenyl_synt PF00348.17 NODE_75137_length_210_cov_1.371429_g67196_i0reverse_frame_1 - 3.6e-16 59.0 0.3 3.8e-16 58.9 0.3 1.0 1 0 0 1 1 1 1 Polyprenyl synthetase DUF1700 PF08006.11 NODE_75135_length_210_cov_1.371429_g67194_i0forward_frame_1 - 0.7 9.4 12.6 0.76 9.3 12.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF4992 PF16383.5 NODE_75126_length_210_cov_1.371429_g67185_i0forward_frame_1 - 0.15 11.6 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function Cnd1 PF12717.7 NODE_75117_length_210_cov_1.445714_g67176_i0forward_frame_1 - 1.4e-07 31.7 0.8 1.6e-07 31.5 0.8 1.0 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 eIF3_subunit PF08597.10 NODE_75117_length_210_cov_1.445714_g67176_i0forward_frame_1 - 0.0024 17.8 1.0 0.0026 17.7 1.0 1.0 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit DUF4803 PF16061.5 NODE_75117_length_210_cov_1.445714_g67176_i0forward_frame_1 - 0.011 15.2 0.5 0.012 15.1 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4803) SapB_1 PF05184.15 NODE_75117_length_210_cov_1.445714_g67176_i0forward_frame_1 - 0.27 11.3 6.9 0.28 11.3 2.9 2.7 2 1 0 2 2 2 0 Saposin-like type B, region 1 Urocanase PF01175.18 NODE_75116_length_210_cov_1.445714_g67175_i0reverse_frame_1 - 0.093 12.4 0.0 0.093 12.4 0.0 1.1 1 0 0 1 1 1 0 Urocanase Rossmann-like domain HTHP PF11534.8 NODE_75116_length_210_cov_1.445714_g67175_i0reverse_frame_1 - 0.099 13.1 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Hexameric tyrosine-coordinated heme protein (HTHP) Peptidase_M99 PF17033.5 NODE_75107_length_210_cov_1.508571_g67166_i0reverse_frame_1 - 0.02 14.3 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 Carboxypeptidase controlling helical cell shape catalytic TIL PF01826.17 NODE_75105_length_210_cov_1.508571_g67164_i0forward_frame_1 - 1.9 8.8 13.6 1.2 9.5 9.0 2.1 1 1 1 2 2 2 0 Trypsin Inhibitor like cysteine rich domain Chloroa_b-bind PF00504.21 NODE_75094_length_210_cov_1.571429_g67153_i0reverse_frame_1 - 0.0025 18.4 0.0 0.0034 17.9 0.0 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein Ribosomal_L50 PF10501.9 NODE_75093_length_210_cov_1.582857_g67152_i0reverse_frame_1 - 0.39 10.9 3.0 1.4 9.1 0.1 2.1 1 1 1 2 2 2 0 Ribosomal subunit 39S Lamprin PF06403.11 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_1 - 0.13 12.3 7.2 0.26 11.3 7.2 1.6 1 1 0 1 1 1 0 Lamprin Pox_A30L_A26L PF06086.12 NODE_75090_length_210_cov_1.594286_g67149_i0reverse_frame_1 - 0.027 14.2 0.2 0.028 14.1 0.2 1.0 1 0 0 1 1 1 0 Orthopoxvirus A26L/A30L protein DUF2102 PF09875.9 NODE_75082_length_210_cov_1.611429_g67141_i0reverse_frame_1 - 0.058 13.1 0.8 2.1 8.1 0.0 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2102) SFTA2 PF15210.6 NODE_75081_length_210_cov_1.617143_g67140_i0reverse_frame_1 - 0.062 13.2 0.8 4.4 7.3 0.0 2.4 2 1 0 2 2 2 0 Surfactant-associated protein 2 PLAC PF08686.11 NODE_75079_length_210_cov_1.645714_g67138_i0forward_frame_1 - 0.051 14.3 1.4 0.12 13.2 1.4 1.7 1 0 0 1 1 1 0 PLAC (protease and lacunin) domain SPC25 PF06703.11 NODE_75077_length_210_cov_1.668571_g67136_i0reverse_frame_1 - 0.19 11.5 0.7 0.21 11.4 0.7 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) zf-RING_2 PF13639.6 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 5.2e-12 45.9 6.6 7.8e-12 45.3 6.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 1.6e-08 34.1 7.2 2.3e-08 33.6 7.2 1.3 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 2.7e-06 27.6 9.6 6.4e-06 26.4 8.5 1.9 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 4.6e-06 26.4 5.9 7.2e-06 25.8 5.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.00011 22.2 5.7 0.00017 21.5 5.7 1.4 1 0 0 1 1 1 1 RING-type zinc-finger FANCL_C PF11793.8 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.00012 22.2 4.8 0.00017 21.7 4.8 1.2 1 0 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.00033 20.5 7.0 0.0005 19.9 7.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.00097 19.1 5.4 0.0028 17.7 5.4 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.0017 18.2 4.4 0.0025 17.6 4.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.0033 17.0 3.7 0.005 16.4 3.7 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.0066 16.6 2.5 0.013 15.6 2.5 1.5 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING CEBP_ZZ PF16366.5 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.0098 16.1 2.4 0.013 15.7 2.4 1.2 1 0 0 1 1 1 1 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-RING_5 PF14634.6 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.015 15.2 5.4 0.022 14.7 5.4 1.2 1 0 0 1 1 1 0 zinc-RING finger domain RINGv PF12906.7 NODE_75077_length_210_cov_1.668571_g67136_i0forward_frame_1 - 0.087 13.0 6.5 0.074 13.2 5.1 1.6 1 1 0 1 1 1 0 RING-variant domain DUF4655 PF15548.6 NODE_75076_length_210_cov_1.674286_g67135_i0reverse_frame_1 - 0.1 11.6 0.1 0.12 11.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4655) Enterotoxin_HS1 PF08090.11 NODE_75076_length_210_cov_1.674286_g67135_i0forward_frame_1 - 4.3 7.4 10.7 3.6 7.6 4.9 2.8 3 0 0 3 3 3 0 Heat stable E.coli enterotoxin 1 CAP_N PF01213.19 NODE_75063_length_210_cov_1.788571_g67122_i0reverse_frame_1 - 0.27 10.7 5.9 0.25 10.8 5.9 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_75063_length_210_cov_1.788571_g67122_i0reverse_frame_1 - 0.44 10.6 3.6 0.45 10.6 3.6 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator Flg_hook PF02120.16 NODE_75054_length_210_cov_1.817143_g67113_i0reverse_frame_1 - 0.098 12.6 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK ELK PF03789.13 NODE_75050_length_210_cov_1.828571_g67109_i0reverse_frame_1 - 1.5 9.0 4.7 4.3 7.5 0.1 2.4 2 0 0 2 2 2 0 ELK domain PAG PF15347.6 NODE_75048_length_210_cov_1.840000_g67107_i0forward_frame_1 - 2.4 7.1 3.2 2.3 7.1 3.2 1.0 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched zf-UBR PF02207.20 NODE_75047_length_210_cov_1.857143_g67106_i0forward_frame_1 - 0.0062 16.7 7.6 0.12 12.5 1.1 2.1 2 0 0 2 2 2 2 Putative zinc finger in N-recognin (UBR box) Fer4_8 PF13183.6 NODE_75047_length_210_cov_1.857143_g67106_i0forward_frame_1 - 0.0063 16.9 2.4 0.0086 16.5 2.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain GRDB PF07355.12 NODE_75046_length_210_cov_1.862857_g67105_i0reverse_frame_1 - 0.15 11.2 0.0 0.16 11.2 0.0 1.0 1 0 0 1 1 1 0 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Fer4 PF00037.27 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_1 - 0.002 17.9 0.2 0.002 17.9 0.2 1.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_1 - 0.0023 17.9 0.3 0.0023 17.9 0.3 1.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_1 - 0.0056 16.7 0.3 0.011 15.7 0.3 1.6 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_4 PF12800.7 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_1 - 0.013 15.9 1.9 0.08 13.5 1.6 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain DUF2784 PF10861.8 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_1 - 0.03 14.3 0.1 0.036 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF2784) DUF4828 PF16110.5 NODE_75039_length_210_cov_1.942857_g67098_i0forward_frame_1 - 0.031 14.7 0.0 0.035 14.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4828) Sacchrp_dh_C PF16653.5 NODE_75035_length_210_cov_1.971429_g67094_i0forward_frame_1 - 8.3e-15 55.6 0.0 8.7e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain Enterotoxin_HS1 PF08090.11 NODE_75034_length_210_cov_1.977143_g67093_i0forward_frame_1 - 0.047 13.7 1.4 0.076 13.0 1.4 1.3 1 0 0 1 1 1 0 Heat stable E.coli enterotoxin 1 Hepcidin PF06446.12 NODE_75034_length_210_cov_1.977143_g67093_i0forward_frame_1 - 0.12 12.8 5.5 0.17 12.3 5.5 1.3 1 0 0 1 1 1 0 Hepcidin DUF3440 PF11922.8 NODE_75020_length_210_cov_2.154286_g67079_i0reverse_frame_1 - 0.16 11.6 0.5 0.17 11.5 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) He_PIG PF05345.12 NODE_75019_length_210_cov_2.165714_g67078_i0forward_frame_1 - 0.29 11.3 5.0 1.1 9.5 5.0 2.2 1 1 0 1 1 1 0 Putative Ig domain Phenol_monoox PF04663.12 NODE_75017_length_210_cov_2.171429_g67076_i0reverse_frame_1 - 0.11 12.7 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 Phenol hydroxylase conserved region DUF902 PF06001.13 NODE_75017_length_210_cov_2.171429_g67076_i0reverse_frame_1 - 0.13 12.8 0.7 0.18 12.3 0.7 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF902) zf-RING_UBOX PF13445.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 5.4e-08 32.7 2.0 9.6e-08 31.9 2.0 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 1.3e-07 31.4 3.9 2.1e-07 30.8 3.9 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 1.5e-07 31.1 3.6 1.5e-07 31.1 3.6 1.4 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 3.3e-07 30.1 2.2 3.3e-07 30.1 2.2 1.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 4.1e-07 29.7 5.4 5.4e-07 29.4 4.0 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 9.9e-07 28.5 2.2 9.9e-07 28.5 2.2 1.4 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 2.3e-06 27.6 4.7 3.9e-06 26.9 4.7 1.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 2.3e-06 27.8 4.5 2.3e-06 27.8 4.5 1.5 2 0 0 2 2 2 1 Ring finger domain Prok-RING_4 PF14447.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 4.1e-06 26.6 2.5 7e-06 25.8 2.5 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.0029 17.9 2.5 0.0029 17.9 2.5 1.5 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_6 PF14835.6 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.0053 16.6 0.8 0.0066 16.3 0.4 1.4 1 1 0 1 1 1 1 zf-RING of BARD1-type protein zf-C3HC4_5 PF17121.5 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.0069 16.2 2.6 0.0069 16.2 2.6 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.031 14.4 1.6 0.034 14.3 1.6 1.2 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-RING_11 PF17123.5 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.12 12.1 4.2 7.7 6.4 0.0 2.3 2 0 0 2 2 2 0 RING-like zinc finger DZR PF12773.7 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.16 12.0 6.2 0.27 11.3 6.3 1.6 1 1 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.7 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.21 11.6 4.3 0.13 12.3 2.5 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain HypA PF01155.19 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.28 11.2 3.4 0.27 11.2 2.8 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IBR PF01485.21 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_1 - 0.92 9.8 6.6 2.7 8.3 3.8 2.4 2 1 1 3 3 3 0 IBR domain, a half RING-finger domain CD47 PF04549.14 NODE_75005_length_210_cov_2.320000_g67064_i0reverse_frame_1 - 0.12 12.5 0.5 0.15 12.2 0.5 1.1 1 0 0 1 1 1 0 CD47 transmembrane region PapB PF03333.13 NODE_75004_length_210_cov_2.320000_g67063_i0reverse_frame_1 - 0.086 12.9 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Adhesin biosynthesis transcription regulatory protein MatE PF01554.18 NODE_75002_length_210_cov_2.342857_g67061_i0forward_frame_1 - 7.5e-13 48.4 0.2 8.6e-13 48.3 0.2 1.0 1 0 0 1 1 1 1 MatE UBA PF00627.31 NODE_74999_length_210_cov_2.365714_g67058_i0forward_frame_1 - 0.0034 17.3 0.0 0.0048 16.8 0.0 1.3 1 0 0 1 1 1 1 UBA/TS-N domain Ycf1 PF05758.12 NODE_74997_length_210_cov_2.422857_g67056_i0reverse_frame_1 - 3 5.6 5.1 3.2 5.5 5.1 1.0 1 0 0 1 1 1 0 Ycf1 Phage_holin_3_6 PF07332.11 NODE_74997_length_210_cov_2.422857_g67056_i0forward_frame_1 - 5.6 7.0 9.7 3.9 7.6 8.4 1.4 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III RLI PF04068.15 NODE_74992_length_210_cov_2.497143_g67051_i0forward_frame_1 - 0.13 12.1 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI Transport_MerF PF11431.8 NODE_74988_length_210_cov_2.628571_g67047_i0reverse_frame_1 - 0.015 15.2 0.1 0.021 14.7 0.1 1.3 1 0 0 1 1 1 0 Membrane transport protein MerF DUF746 PF05344.11 NODE_74987_length_210_cov_2.640000_g67046_i0forward_frame_1 - 0.095 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) HlyIII PF03006.20 NODE_74985_length_210_cov_2.685714_g67044_i0reverse_frame_1 - 0.0062 16.3 4.8 0.0065 16.2 4.8 1.0 1 0 0 1 1 1 1 Haemolysin-III related Thioredoxin_2 PF13098.6 NODE_74980_length_210_cov_2.891429_g67039_i0forward_frame_1 - 0.13 12.7 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Xol-1_N PF09108.10 NODE_74978_length_210_cov_3.005714_g67037_i0reverse_frame_1 - 0.16 11.8 0.2 0.17 11.8 0.2 1.1 1 0 0 1 1 1 0 Switch protein XOL-1, N-terminal AFOR_C PF01314.18 NODE_74977_length_210_cov_3.462857_g67036_i0forward_frame_1 - 0.16 10.9 1.6 0.17 10.9 1.6 1.0 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Op_neuropeptide PF08035.11 NODE_74975_length_210_cov_3.514286_g67034_i0reverse_frame_1 - 0.2 11.5 0.0 0.32 10.9 0.0 1.2 1 0 0 1 1 1 0 Opioids neuropeptide Glyco_hydro_1 PF00232.18 NODE_74975_length_210_cov_3.514286_g67034_i0forward_frame_1 - 4.3e-18 65.0 0.2 4.6e-18 64.9 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 DUF3222 PF11519.8 NODE_74966_length_210_cov_16.725714_g67025_i0forward_frame_1 - 0.02 15.1 0.2 0.024 14.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3222) KIAA1328 PF15369.6 NODE_74965_length_210_cov_16.845714_g67024_i0forward_frame_1 - 0.011 15.5 3.0 0.013 15.4 3.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein KIAA1328 Metallopep PF12044.8 NODE_74957_length_210_cov_29.622857_g67016_i0reverse_frame_1 - 0.061 11.9 0.1 0.062 11.9 0.1 1.0 1 0 0 1 1 1 0 Putative peptidase family Tom6 PF17112.5 NODE_74957_length_210_cov_29.622857_g67016_i0forward_frame_1 - 0.056 12.9 0.2 0.09 12.3 0.2 1.3 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom6, fungal RE_HaeIII PF09556.10 NODE_74950_length_210_cov_40.251429_g67009_i0reverse_frame_1 - 0.08 12.0 0.9 0.092 11.8 0.9 1.0 1 0 0 1 1 1 0 HaeIII restriction endonuclease YajC PF02699.15 NODE_74947_length_210_cov_43.594286_g67006_i0forward_frame_1 - 0.03 14.2 0.3 0.047 13.6 0.3 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit Alpha_Helical PF18489.1 NODE_74944_length_210_cov_44.662857_g67003_i0reverse_frame_1 - 0.0085 16.3 0.2 0.01 16.0 0.2 1.2 1 0 0 1 1 1 1 Alpha helical domain DUF4574 PF15141.6 NODE_74938_length_210_cov_52.537143_g66997_i0reverse_frame_1 - 0.091 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Transpos_assoc PF13963.6 NODE_74938_length_210_cov_52.537143_g66997_i0forward_frame_1 - 0.12 12.7 0.1 0.12 12.7 0.1 1.5 2 0 0 2 2 2 0 Transposase-associated domain ProSAAS PF07259.12 NODE_74933_length_210_cov_55.394286_g66992_i0forward_frame_1 - 0.04 13.9 4.5 0.044 13.7 4.5 1.1 1 0 0 1 1 1 0 ProSAAS precursor GreA_GreB_N PF03449.15 NODE_74933_length_210_cov_55.394286_g66992_i0forward_frame_1 - 0.083 13.1 0.5 0.083 13.1 0.5 2.5 1 1 1 2 2 2 0 Transcription elongation factor, N-terminal Snurportin1 PF11538.8 NODE_74933_length_210_cov_55.394286_g66992_i0forward_frame_1 - 8.2 6.7 9.7 0.61 10.3 2.3 2.3 2 1 0 2 2 2 0 Snurportin1 Fe-ADH PF00465.19 NODE_74931_length_210_cov_56.908571_g66990_i0forward_frame_1 - 0.043 12.6 0.1 0.048 12.5 0.1 1.0 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase Flu_C_NS1 PF03506.13 NODE_74917_length_210_cov_79.908571_g66976_i0reverse_frame_1 - 0.071 13.1 2.2 0.075 13.0 2.2 1.0 1 0 0 1 1 1 0 Influenza C non-structural protein (NS1) YtpI PF14007.6 NODE_74914_length_210_cov_88.800000_g66973_i0forward_frame_1 - 0.069 13.3 0.1 0.08 13.1 0.1 1.1 1 0 0 1 1 1 0 YtpI-like protein Defensin_2 PF01097.18 NODE_74912_length_210_cov_94.777143_g66971_i0forward_frame_1 - 0.047 13.6 1.9 0.41 10.6 0.0 2.1 2 0 0 2 2 2 0 Arthropod defensin ETRAMP PF09716.10 NODE_74910_length_210_cov_98.600000_g66969_i0forward_frame_1 - 0.13 12.3 1.2 0.15 12.1 1.2 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) OppC_N PF12911.7 NODE_74906_length_210_cov_104.588571_g66965_i0reverse_frame_1 - 0.12 12.4 3.8 0.16 11.9 3.8 1.2 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C QslA_E PF18226.1 NODE_74902_length_210_cov_110.320000_g66961_i0reverse_frame_1 - 0.076 12.9 0.2 0.085 12.8 0.2 1.1 1 0 0 1 1 1 0 LasR-specific antiactivator QslA chain E Toxin_33 PF08121.11 NODE_74900_length_210_cov_119.297143_g66959_i0reverse_frame_1 - 2 8.3 8.8 3.3 7.6 8.8 1.3 1 0 0 1 1 1 0 Waglerin family Hormone_5 PF00184.17 NODE_74898_length_210_cov_130.154286_g66957_i0forward_frame_1 - 0.043 14.6 0.4 0.056 14.3 0.4 1.1 1 0 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain Rrn6 PF10214.9 NODE_74897_length_210_cov_175.765714_g66956_i0forward_frame_1 - 0.1 11.1 0.8 0.1 11.0 0.8 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DapB_C PF05173.14 NODE_74890_length_210_cov_1114.005714_g66949_i0reverse_frame_1 - 0.038 14.0 0.0 0.039 14.0 0.0 1.1 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, C-terminus LacY_symp PF01306.19 NODE_74890_length_210_cov_1114.005714_g66949_i0forward_frame_1 - 0.016 14.0 2.0 0.016 14.0 2.0 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter DNA_pol3_beta_3 PF02768.15 NODE_74883_length_211_cov_0.869318_g66942_i0reverse_frame_3 - 0.16 11.8 0.1 0.19 11.6 0.1 1.1 1 0 0 1 1 1 0 DNA polymerase III beta subunit, C-terminal domain DUF3885 PF13021.6 NODE_74883_length_211_cov_0.869318_g66942_i0forward_frame_3 - 0.091 12.9 0.1 0.26 11.4 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3885) UCH PF00443.29 NODE_74880_length_211_cov_0.903409_g66939_i0reverse_frame_2 - 0.073 12.5 0.0 0.078 12.5 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase OS-D PF03392.13 NODE_74880_length_211_cov_0.903409_g66939_i0forward_frame_3 - 0.046 13.8 0.7 0.051 13.7 0.7 1.1 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D MtrB PF05440.12 NODE_74876_length_211_cov_0.903409_g66935_i0reverse_frame_3 - 0.069 13.6 0.0 0.091 13.2 0.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B DUF2064 PF09837.9 NODE_74875_length_211_cov_0.903409_g66934_i0reverse_frame_3 - 0.14 12.0 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2064) DUF4887 PF16228.5 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 8.7e-05 22.8 3.2 0.00011 22.5 3.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4887) DUF3584 PF12128.8 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.0035 15.0 1.7 0.0037 14.9 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF3450 PF11932.8 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.0061 15.9 3.8 0.0072 15.7 3.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) ZapB PF06005.12 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.015 15.7 4.8 0.018 15.4 4.8 1.2 1 0 0 1 1 1 0 Cell division protein ZapB Ehrlichia_rpt PF09528.10 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.026 14.0 2.2 0.04 13.4 2.2 1.4 1 0 0 1 1 1 0 Ehrlichia tandem repeat (Ehrlichia_rpt) DHR10 PF18595.1 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.048 13.7 7.8 0.054 13.5 7.8 1.0 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain XRN_N PF03159.18 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.058 12.8 1.9 0.062 12.7 1.9 1.0 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus MctB PF11382.8 NODE_74868_length_211_cov_0.909091_g66927_i0reverse_frame_2 - 0.076 12.7 0.5 0.08 12.6 0.5 1.1 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB NLRC4_HD PF17889.1 NODE_74865_length_211_cov_0.909091_g66924_i0forward_frame_3 - 0.027 14.8 0.1 0.029 14.7 0.1 1.1 1 0 0 1 1 1 0 NLRC4 helical domain TMEM52 PF14979.6 NODE_74859_length_211_cov_0.909091_g66918_i0reverse_frame_2 - 0.77 9.7 5.3 0.82 9.6 5.3 1.1 1 0 0 1 1 1 0 Transmembrane 52 ASFV_360 PF01671.16 NODE_74859_length_211_cov_0.909091_g66918_i0forward_frame_2 - 0.0019 17.7 0.7 0.0023 17.5 0.7 1.2 1 0 0 1 1 1 1 African swine fever virus multigene family 360 protein Glyco_hydro_28 PF00295.17 NODE_74859_length_211_cov_0.909091_g66918_i0forward_frame_2 - 0.052 12.6 5.5 0.32 10.0 1.2 2.0 1 1 1 2 2 2 0 Glycosyl hydrolases family 28 DUF2542 PF10808.8 NODE_74858_length_211_cov_0.909091_g66917_i0forward_frame_2 - 0.017 15.6 0.8 0.021 15.3 0.2 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2542) SSI PF00720.17 NODE_74856_length_211_cov_0.909091_g66915_i0forward_frame_3 - 0.051 13.5 2.0 0.066 13.2 2.0 1.1 1 0 0 1 1 1 0 Subtilisin inhibitor-like RRF_GI PF12614.8 NODE_74854_length_211_cov_0.909091_g66913_i0reverse_frame_3 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Ribosome recycling factor Mesothelin PF06060.12 NODE_74854_length_211_cov_0.909091_g66913_i0reverse_frame_2 - 0.035 12.3 0.0 0.037 12.2 0.0 1.0 1 0 0 1 1 1 0 Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin) PAGK PF15284.6 NODE_74851_length_211_cov_0.909091_g66910_i0reverse_frame_3 - 1.2 9.1 4.0 13 5.8 4.0 2.0 1 1 0 1 1 1 0 Phage-encoded virulence factor TRM13 PF05206.14 NODE_74851_length_211_cov_0.909091_g66910_i0forward_frame_3 - 0.071 12.6 3.3 0.072 12.6 3.3 1.0 1 0 0 1 1 1 0 Methyltransferase TRM13 DUF2675 PF11247.8 NODE_74851_length_211_cov_0.909091_g66910_i0forward_frame_2 - 0.099 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2675) DUF3915 PF13054.6 NODE_74848_length_211_cov_0.909091_g66907_i0reverse_frame_2 - 0.051 13.6 3.3 0.055 13.5 3.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) SelP_N PF04592.14 NODE_74848_length_211_cov_0.909091_g66907_i0reverse_frame_2 - 0.073 12.5 15.5 0.073 12.5 15.5 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Spem1 PF15670.5 NODE_74848_length_211_cov_0.909091_g66907_i0reverse_frame_2 - 1.1 8.7 10.5 1.2 8.6 10.5 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 DEAD PF00270.29 NODE_74847_length_211_cov_0.914773_g66906_i0reverse_frame_2 - 0.0029 17.4 0.1 0.0032 17.2 0.1 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF900 PF05990.12 NODE_74847_length_211_cov_0.914773_g66906_i0forward_frame_2 - 0.031 13.8 0.7 0.032 13.8 0.7 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) Microcin PF03526.13 NODE_74846_length_211_cov_0.943182_g66905_i0reverse_frame_3 - 0.0018 18.1 0.9 0.0023 17.7 0.9 1.2 1 0 0 1 1 1 1 Colicin E1 (microcin) immunity protein Bee_toxin PF17454.2 NODE_74846_length_211_cov_0.943182_g66905_i0forward_frame_2 - 0.045 13.8 1.3 0.065 13.3 1.3 1.3 1 0 0 1 1 1 0 Honey bee toxin pEK499_p136 PF18736.1 NODE_74845_length_211_cov_0.954545_g66904_i0reverse_frame_3 - 0.17 11.5 0.1 0.19 11.3 0.1 1.1 1 0 0 1 1 1 0 HEPN pEK499 p136 Potass_KdpF PF09604.10 NODE_74845_length_211_cov_0.954545_g66904_i0reverse_frame_3 - 7.5 6.7 7.5 6.8 6.8 4.9 2.0 2 0 0 2 2 2 0 F subunit of K+-transporting ATPase (Potass_KdpF) Glyco_transf_8 PF01501.20 NODE_74844_length_211_cov_0.965909_g66903_i0reverse_frame_2 - 5.5e-08 32.7 0.1 6.6e-08 32.4 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 8 Cbl_N3 PF02762.14 NODE_74844_length_211_cov_0.965909_g66903_i0forward_frame_3 - 0.075 12.9 0.2 0.083 12.8 0.2 1.1 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, SH2-like domain Lamprin PF06403.11 NODE_74842_length_211_cov_1.000000_g66901_i0forward_frame_2 - 0.07 13.1 0.5 0.089 12.8 0.2 1.3 2 0 0 2 2 2 0 Lamprin pPIWI_RE_REase PF18154.1 NODE_74841_length_211_cov_1.034091_g66900_i0reverse_frame_3 - 0.12 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 REase associating with pPIWI_RE DUF2726 PF10881.8 NODE_74840_length_211_cov_1.039773_g66899_i0reverse_frame_2 - 0.11 12.4 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2726) EFF-AFF PF14884.6 NODE_74832_length_211_cov_1.085227_g66891_i0forward_frame_2 - 2.9 5.9 4.0 2.3 6.3 4.0 1.1 1 0 0 1 1 1 0 Type I membrane glycoproteins cell-cell fusogen Neuroparsin PF07327.11 NODE_74829_length_211_cov_1.096591_g66888_i0reverse_frame_2 - 0.023 15.1 2.6 0.031 14.7 2.6 1.2 1 0 0 1 1 1 0 Neuroparsin BAG PF02179.16 NODE_74828_length_211_cov_1.102273_g66887_i0forward_frame_2 - 0.17 12.4 0.0 0.25 11.8 0.0 1.2 1 0 0 1 1 1 0 BAG domain PIF3 PF05006.12 NODE_74824_length_211_cov_1.119318_g66883_i0reverse_frame_2 - 0.073 13.2 6.4 0.087 12.9 6.4 1.1 1 0 0 1 1 1 0 Per os infectivity factor 3 APCDDC PF14921.6 NODE_74824_length_211_cov_1.119318_g66883_i0forward_frame_3 - 0.025 14.0 0.2 0.027 13.9 0.2 1.0 1 0 0 1 1 1 0 Adenomatosis polyposis coli down-regulated 1 DUF956 PF06115.11 NODE_74823_length_211_cov_1.125000_g66882_i0forward_frame_2 - 0.17 11.6 0.1 0.19 11.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF956) LRR_6 PF13516.6 NODE_74822_length_211_cov_1.125000_g66881_i0reverse_frame_3 - 2.5e-05 23.9 0.2 2.5e-05 23.9 0.2 1.8 2 0 0 2 2 2 1 Leucine Rich repeat LRR_1 PF00560.33 NODE_74822_length_211_cov_1.125000_g66881_i0reverse_frame_3 - 0.17 12.5 1.1 17 6.4 0.1 2.4 2 1 0 2 2 2 0 Leucine Rich Repeat LRR_4 PF12799.7 NODE_74822_length_211_cov_1.125000_g66881_i0reverse_frame_3 - 1.1 9.8 5.9 6.3 7.4 5.9 2.1 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) Lys_export PF03956.13 NODE_74821_length_211_cov_1.130682_g66880_i0reverse_frame_2 - 0.025 14.1 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 Lysine exporter LysO # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks385.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks385.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks385.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks385.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:25:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Androgen_recep PF02166.16 NODE_74816_length_211_cov_1.136364_g66875_i0forward_frame_3 - 0.034 13.0 0.1 0.036 12.9 0.1 1.0 1 0 0 1 1 1 0 Androgen receptor Chlam_PMP PF02415.17 NODE_74813_length_211_cov_1.159091_g66872_i0reverse_frame_3 - 0.0048 17.3 11.7 0.02 15.4 0.4 2.8 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat RNA_pol_Rpb1_1 PF04997.12 NODE_74808_length_211_cov_1.187500_g66867_i0reverse_frame_3 - 0.13 11.6 0.6 0.12 11.6 0.6 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 1 MyTH4 PF00784.17 NODE_74808_length_211_cov_1.187500_g66867_i0reverse_frame_2 - 0.062 13.8 0.4 0.081 13.4 0.4 1.2 1 0 0 1 1 1 0 MyTH4 domain CPSase_L_D2 PF02786.17 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 5.7e-13 48.8 0.1 6e-13 48.8 0.1 1.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.6 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 4.4e-08 32.9 0.1 5e-08 32.8 0.1 1.0 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 4.3e-06 26.9 0.0 4.9e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 2.9e-05 23.7 0.0 3.5e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_3 - 0.026 14.0 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus SpdB PF05122.13 NODE_74808_length_211_cov_1.187500_g66867_i0forward_frame_2 - 0.075 13.2 5.2 0.14 12.4 5.2 1.4 1 0 0 1 1 1 0 Mobile element transfer protein IDH PF03971.14 NODE_74806_length_211_cov_1.204545_g66865_i0reverse_frame_3 - 0.064 11.7 0.1 0.074 11.5 0.1 1.0 1 0 0 1 1 1 0 Monomeric isocitrate dehydrogenase Toxin_30 PF08117.11 NODE_74804_length_211_cov_1.215909_g66863_i0reverse_frame_2 - 2.7 8.3 8.0 10 6.4 1.0 2.4 1 1 1 2 2 2 0 Ptu family HMw1_D2 PF18254.1 NODE_74800_length_211_cov_1.244318_g66859_i0forward_frame_3 - 0.0065 16.8 0.0 0.0068 16.7 0.0 1.1 1 0 0 1 1 1 1 HMW1 domain 2 Myticin-prepro PF10690.9 NODE_74798_length_211_cov_1.250000_g66857_i0reverse_frame_3 - 1.2 9.4 6.4 1.5 9.1 6.4 1.3 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel AAA_assoc PF14363.6 NODE_74798_length_211_cov_1.250000_g66857_i0reverse_frame_2 - 0.11 12.8 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain associated at C-terminal with AAA PIEZO PF15917.5 NODE_74797_length_211_cov_1.250000_g66856_i0forward_frame_3 - 3.2 7.2 5.9 3.5 7.0 5.9 1.0 1 0 0 1 1 1 0 Piezo DUF4106 PF13388.6 NODE_74794_length_211_cov_1.295455_g66853_i0reverse_frame_2 - 0.93 8.7 1.9 0.87 8.8 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) Fer2 PF00111.27 NODE_74792_length_211_cov_1.306818_g66851_i0reverse_frame_3 - 0.068 13.1 2.5 0.087 12.8 2.5 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain VEGF_C PF14554.6 NODE_74792_length_211_cov_1.306818_g66851_i0reverse_frame_2 - 0.039 14.1 0.4 0.64 10.2 0.0 2.1 2 0 0 2 2 2 0 VEGF heparin-binding domain MSC PF09402.10 NODE_74790_length_211_cov_1.318182_g66849_i0reverse_frame_2 - 0.32 10.4 1.3 0.39 10.1 1.3 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain ArlS_N PF18719.1 NODE_74787_length_211_cov_1.335227_g66846_i0reverse_frame_3 - 0.019 15.2 0.4 0.023 14.9 0.4 1.1 1 0 0 1 1 1 0 ArlS sensor domain TPR_12 PF13424.6 NODE_74787_length_211_cov_1.335227_g66846_i0reverse_frame_3 - 0.03 14.6 0.0 0.034 14.4 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Adeno_E4 PF05385.11 NODE_74785_length_211_cov_1.346591_g66844_i0forward_frame_3 - 0.023 14.8 1.7 0.026 14.6 1.7 1.1 1 0 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein zf-FLZ PF04570.14 NODE_74783_length_211_cov_1.357955_g66842_i0forward_frame_3 - 0.034 13.6 0.7 0.05 13.1 0.2 1.5 2 0 0 2 2 2 0 zinc-finger of the FCS-type, C2-C2 DUF553 PF04473.12 NODE_74782_length_211_cov_1.357955_g66841_i0reverse_frame_2 - 0.023 14.2 0.1 0.023 14.2 0.1 1.1 1 0 0 1 1 1 0 Transglutaminase-like domain PTEN_C2 PF10409.9 NODE_74782_length_211_cov_1.357955_g66841_i0forward_frame_3 - 0.078 12.7 0.0 0.091 12.5 0.0 1.1 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein DUF2070 PF09843.9 NODE_74782_length_211_cov_1.357955_g66841_i0forward_frame_3 - 0.15 10.3 0.1 0.2 9.9 0.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Fer2_3 PF13085.6 NODE_74781_length_211_cov_1.357955_g66840_i0forward_frame_3 - 0.081 12.9 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF2860 PF11059.8 NODE_74777_length_211_cov_1.357955_g66836_i0reverse_frame_2 - 0.043 13.1 0.0 0.047 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2860) PriA_CRR PF18319.1 NODE_74772_length_211_cov_1.363636_g66831_i0reverse_frame_2 - 0.019 15.0 6.3 1 9.4 0.8 2.6 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain Peptidase_S29 PF02907.15 NODE_74771_length_211_cov_1.363636_g66830_i0reverse_frame_3 - 0.067 12.9 0.0 0.071 12.9 0.0 1.1 1 0 0 1 1 1 0 Hepatitis C virus NS3 protease Fer4_15 PF13459.6 NODE_74766_length_211_cov_1.363636_g66825_i0reverse_frame_2 - 0.0082 16.9 2.0 0.011 16.4 2.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain MrpF_PhaF PF04066.13 NODE_74757_length_211_cov_1.426136_g66816_i0reverse_frame_2 - 0.19 12.1 0.5 0.24 11.8 0.5 1.2 1 0 0 1 1 1 0 Multiple resistance and pH regulation protein F (MrpF / PhaF) DUF1922 PF09082.10 NODE_74757_length_211_cov_1.426136_g66816_i0forward_frame_2 - 0.093 13.0 7.7 0.28 11.5 7.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF1922) GILT PF03227.16 NODE_74755_length_211_cov_1.443182_g66814_i0forward_frame_2 - 0.023 14.9 0.1 0.029 14.6 0.1 1.1 1 0 0 1 1 1 0 Gamma interferon inducible lysosomal thiol reductase (GILT) NICE-1 PF15845.5 NODE_74753_length_211_cov_1.448864_g66812_i0reverse_frame_2 - 0.12 13.2 5.6 0.14 12.9 5.6 1.2 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family HEPN_SAV2148 PF18725.1 NODE_74753_length_211_cov_1.448864_g66812_i0forward_frame_2 - 0.097 12.1 0.3 0.12 11.7 0.3 1.2 1 0 0 1 1 1 0 SAV2148-like HEPN DUF3675 PF12428.8 NODE_74749_length_211_cov_1.494318_g66808_i0reverse_frame_2 - 0.076 13.6 0.3 0.091 13.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) DNA_ligase_ZBD PF03119.16 NODE_74746_length_211_cov_1.511364_g66805_i0forward_frame_2 - 0.55 10.3 3.4 14 5.9 0.7 2.4 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain 2Fe-2S_thioredx PF01257.19 NODE_74744_length_211_cov_1.522727_g66803_i0forward_frame_3 - 0.037 13.9 0.6 0.042 13.7 0.6 1.1 1 0 0 1 1 1 0 Thioredoxin-like [2Fe-2S] ferredoxin ANAPC4 PF12896.7 NODE_74738_length_211_cov_1.545455_g66797_i0reverse_frame_3 - 0.065 12.7 0.0 0.082 12.4 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 PAF-AH_p_II PF03403.13 NODE_74737_length_211_cov_1.551136_g66796_i0forward_frame_3 - 0.21 10.1 0.0 0.21 10.1 0.0 1.0 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II Ribosomal_L41 PF05162.13 NODE_74736_length_211_cov_1.556818_g66795_i0reverse_frame_3 - 0.15 12.1 3.8 0.24 11.5 3.8 1.3 1 0 0 1 1 1 0 Ribosomal protein L41 DUF5581 PF17744.1 NODE_74734_length_211_cov_1.568182_g66793_i0reverse_frame_3 - 0.047 13.0 3.2 0.06 12.7 3.2 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5581) BCCT PF02028.17 NODE_74733_length_211_cov_1.573864_g66792_i0forward_frame_3 - 0.14 10.6 0.2 0.14 10.6 0.2 1.0 1 0 0 1 1 1 0 BCCT, betaine/carnitine/choline family transporter TBD PF12845.7 NODE_74731_length_211_cov_1.585227_g66790_i0reverse_frame_2 - 0.19 11.6 2.8 0.19 11.7 1.5 1.7 2 0 0 2 2 2 0 TBD domain HupE_UreJ PF04955.12 NODE_74727_length_211_cov_1.590909_g66786_i0forward_frame_3 - 0.11 12.0 1.5 0.12 11.8 1.5 1.1 1 0 0 1 1 1 0 HupE / UreJ protein PepSY_TM PF03929.16 NODE_74725_length_211_cov_1.607955_g66784_i0reverse_frame_2 - 0.1 12.2 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 PepSY-associated TM region Afaf PF15339.6 NODE_74725_length_211_cov_1.607955_g66784_i0reverse_frame_2 - 0.79 9.4 4.1 0.87 9.3 4.1 1.2 1 0 0 1 1 1 0 Acrosome formation-associated factor DUF2946 PF11162.8 NODE_74725_length_211_cov_1.607955_g66784_i0reverse_frame_2 - 0.96 10.1 7.4 1.1 9.9 7.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) 7tm_2 PF00002.24 NODE_74725_length_211_cov_1.607955_g66784_i0forward_frame_2 - 0.0094 15.3 3.5 0.0098 15.2 3.5 1.1 1 0 0 1 1 1 1 7 transmembrane receptor (Secretin family) TMEM154 PF15102.6 NODE_74725_length_211_cov_1.607955_g66784_i0forward_frame_2 - 0.099 12.5 1.7 0.097 12.6 1.7 1.2 1 0 0 1 1 1 0 TMEM154 protein family DUF2623 PF11115.8 NODE_74718_length_211_cov_1.653409_g66777_i0reverse_frame_3 - 0.031 14.3 0.6 0.063 13.4 0.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2623) Latrotoxin_C PF15658.6 NODE_74717_length_211_cov_1.664773_g66776_i0forward_frame_2 - 0.0072 16.1 1.0 0.008 15.9 1.0 1.1 1 0 0 1 1 1 1 Latrotoxin C-terminal domain Lamprin PF06403.11 NODE_74714_length_211_cov_1.693182_g66773_i0reverse_frame_3 - 0.66 9.9 4.8 0.88 9.5 4.8 1.3 1 0 0 1 1 1 0 Lamprin DUF4605 PF15378.6 NODE_74714_length_211_cov_1.693182_g66773_i0reverse_frame_3 - 5.8 6.9 9.2 1.6 8.6 1.4 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4605) Lamprin PF06403.11 NODE_74714_length_211_cov_1.693182_g66773_i0reverse_frame_2 - 5.3 7.0 9.6 8.2 6.4 9.5 1.6 1 1 0 1 1 1 0 Lamprin DUF5472 PF17566.2 NODE_74704_length_211_cov_1.778409_g66763_i0reverse_frame_2 - 0.031 14.2 0.0 0.036 14.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) MraZ PF02381.18 NODE_74703_length_211_cov_1.784091_g66762_i0reverse_frame_3 - 0.059 13.4 0.5 0.075 13.0 0.5 1.2 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Creb_binding PF09030.10 NODE_74703_length_211_cov_1.784091_g66762_i0forward_frame_3 - 0.064 13.9 0.0 0.086 13.5 0.0 1.2 1 0 0 1 1 1 0 Creb binding RuvC_1 PF18516.1 NODE_74702_length_211_cov_1.784091_g66761_i0forward_frame_2 - 0.0045 16.2 0.0 0.0049 16.1 0.0 1.1 1 0 0 1 1 1 1 RuvC nuclease domain BCAS3 PF12490.8 NODE_74696_length_211_cov_1.806818_g66755_i0reverse_frame_2 - 0.027 14.0 0.0 0.029 13.9 0.0 1.0 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 CENP-Q PF13094.6 NODE_74696_length_211_cov_1.806818_g66755_i0forward_frame_3 - 0.02 15.1 0.0 0.022 15.0 0.0 1.0 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit EcsB PF05975.12 NODE_74692_length_211_cov_1.835227_g66751_i0forward_frame_3 - 0.032 13.1 3.9 0.033 13.0 3.9 1.0 1 0 0 1 1 1 0 Bacterial ABC transporter protein EcsB DUF5345 PF17280.2 NODE_74692_length_211_cov_1.835227_g66751_i0forward_frame_3 - 1.6 8.7 8.2 2.3 8.2 8.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5345) Peptidase_S49 PF01343.18 NODE_74690_length_211_cov_1.869318_g66749_i0forward_frame_3 - 4.5e-15 55.9 0.0 4.8e-15 55.8 0.0 1.0 1 0 0 1 1 1 1 Peptidase family S49 O-antigen_lig PF13425.6 NODE_74687_length_211_cov_1.880682_g66746_i0reverse_frame_3 - 0.036 12.8 4.1 0.04 12.7 4.1 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein Anoctamin PF04547.12 NODE_74687_length_211_cov_1.880682_g66746_i0reverse_frame_3 - 0.33 9.7 3.0 0.37 9.6 3.0 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel TMEM156 PF15106.6 NODE_74687_length_211_cov_1.880682_g66746_i0reverse_frame_3 - 3 7.2 5.0 3.3 7.1 5.0 1.0 1 0 0 1 1 1 0 TMEM156 protein family Lamprin PF06403.11 NODE_74686_length_211_cov_1.880682_g66745_i0forward_frame_3 - 4.2 7.3 18.0 1.2 9.0 8.9 2.1 1 1 1 2 2 2 0 Lamprin Staph_opine_DH PF10100.9 NODE_74685_length_211_cov_1.886364_g66744_i0forward_frame_3 - 0.082 11.5 0.2 0.087 11.4 0.2 1.0 1 0 0 1 1 1 0 Staphylopine dehydrogenase Ribosomal_L9_C PF03948.14 NODE_74680_length_211_cov_1.926136_g66739_i0forward_frame_3 - 0.1 13.1 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L9, C-terminal domain Seryl_tRNA_N PF02403.22 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 1.6e-13 50.8 8.7 1.8e-13 50.7 8.7 1.0 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF3713 PF12506.8 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 0.026 14.8 3.6 0.03 14.6 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3713) DUF3145 PF11343.8 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 0.026 14.1 0.0 0.03 13.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3145) DASH_Dad3 PF08656.10 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 0.093 12.8 2.5 0.092 12.8 1.3 1.6 1 1 1 2 2 2 0 DASH complex subunit Dad3 FlxA PF14282.6 NODE_74679_length_211_cov_1.931818_g66738_i0forward_frame_2 - 7.4 6.6 15.5 0.64 10.0 2.9 2.1 1 1 1 2 2 2 0 FlxA-like protein DUF3295 PF11702.8 NODE_74678_length_211_cov_1.954545_g66737_i0reverse_frame_2 - 0.023 14.1 0.1 0.024 14.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) AMP-binding PF00501.28 NODE_74676_length_211_cov_1.960227_g66735_i0reverse_frame_3 - 0.0038 15.9 0.0 0.0039 15.8 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme DAPG_hydrolase PF18089.1 NODE_74673_length_211_cov_2.000000_g66732_i0forward_frame_3 - 0.27 10.8 0.2 0.32 10.5 0.2 1.1 1 0 0 1 1 1 0 DAPG hydrolase PhiG domain Band_7_C PF16200.5 NODE_74672_length_211_cov_2.005682_g66731_i0reverse_frame_2 - 0.075 13.1 0.0 0.098 12.7 0.0 1.1 1 0 0 1 1 1 0 C-terminal region of band_7 zf-met2 PF12907.7 NODE_74671_length_211_cov_2.022727_g66730_i0forward_frame_2 - 0.022 14.9 0.1 0.052 13.7 0.0 1.6 2 0 0 2 2 2 0 Zinc-binding Kinesin PF00225.23 NODE_74670_length_211_cov_2.028409_g66729_i0reverse_frame_3 - 2.6e-18 66.0 0.3 2.7e-18 66.0 0.3 1.0 1 0 0 1 1 1 1 Kinesin motor domain Paramecium_SA PF01508.16 NODE_74667_length_211_cov_2.034091_g66726_i0reverse_frame_3 - 0.2 12.1 11.0 0.27 11.7 11.0 1.2 1 0 0 1 1 1 0 Paramecium surface antigen domain MAM PF00629.23 NODE_74667_length_211_cov_2.034091_g66726_i0forward_frame_3 - 0.17 11.8 0.1 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 MAM domain, meprin/A5/mu DUF5510 PF17629.2 NODE_74667_length_211_cov_2.034091_g66726_i0forward_frame_2 - 0.12 12.3 5.4 0.15 12.0 5.4 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5510) PDCD2_C PF04194.13 NODE_74666_length_211_cov_2.045455_g66725_i0forward_frame_2 - 0.17 12.0 1.1 0.17 12.0 1.1 1.1 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain Lar_restr_allev PF14354.6 NODE_74665_length_211_cov_2.079545_g66724_i0forward_frame_2 - 0.02 15.3 0.2 0.027 14.9 0.2 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar Calc_CGRP_IAPP PF00214.19 NODE_74662_length_211_cov_2.102273_g66721_i0forward_frame_2 - 0.019 15.3 1.9 0.022 15.1 1.9 1.1 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family Cytochrom_B559 PF00283.19 NODE_74661_length_211_cov_2.119318_g66720_i0forward_frame_2 - 0.084 12.3 1.4 0.13 11.7 1.4 1.2 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits PRK PF00485.18 NODE_74657_length_211_cov_2.159091_g66716_i0forward_frame_2 - 4.8e-05 23.2 0.1 5.9e-05 22.9 0.1 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family SNARE PF05739.19 NODE_74656_length_211_cov_2.164773_g66715_i0reverse_frame_3 - 0.29 11.2 1.3 0.4 10.7 1.3 1.1 1 0 0 1 1 1 0 SNARE domain DUF2833 PF11090.8 NODE_74652_length_211_cov_2.204545_g66711_i0reverse_frame_2 - 0.41 11.0 3.8 0.5 10.8 3.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2833) Pkinase_Tyr PF07714.17 NODE_74647_length_211_cov_2.244318_g66706_i0reverse_frame_3 - 0.0011 18.3 0.2 0.0011 18.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_74647_length_211_cov_2.244318_g66706_i0reverse_frame_3 - 0.037 13.4 0.2 0.039 13.3 0.2 1.0 1 0 0 1 1 1 0 Protein kinase domain SRTM1 PF15872.5 NODE_74646_length_211_cov_2.255682_g66705_i0forward_frame_3 - 0.028 14.6 6.3 0.032 14.4 6.3 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 T4-Gluco-transf PF09198.10 NODE_74646_length_211_cov_2.255682_g66705_i0forward_frame_2 - 0.045 13.3 1.0 0.094 12.3 1.0 1.6 1 0 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase Ferlin_C PF16165.5 NODE_74642_length_211_cov_2.267045_g66701_i0reverse_frame_3 - 0.14 12.1 0.5 0.16 11.9 0.5 1.1 1 0 0 1 1 1 0 Ferlin C-terminus SURF1 PF02104.15 NODE_74642_length_211_cov_2.267045_g66701_i0forward_frame_3 - 0.11 12.7 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 SURF1 family Myticin-prepro PF10690.9 NODE_74637_length_211_cov_2.443182_g66696_i0forward_frame_3 - 0.12 12.6 1.7 0.13 12.5 1.7 1.2 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel PGI PF00342.19 NODE_74636_length_211_cov_2.477273_g66695_i0reverse_frame_3 - 2.7e-23 82.3 0.9 2.9e-23 82.2 0.9 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase DDDD PF10161.9 NODE_74636_length_211_cov_2.477273_g66695_i0reverse_frame_3 - 0.13 12.0 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Putative mitochondrial precursor protein zf-TFIIIC PF12660.7 NODE_74636_length_211_cov_2.477273_g66695_i0reverse_frame_2 - 0.0043 17.0 2.7 0.0048 16.8 2.7 1.2 1 0 0 1 1 1 1 Putative zinc-finger of transcription factor IIIC complex LPD28 PF18843.1 NODE_74635_length_211_cov_2.488636_g66694_i0reverse_frame_2 - 0.15 11.7 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein associated domain 28 Fungal_TACC PF12709.7 NODE_74633_length_211_cov_2.573864_g66692_i0reverse_frame_3 - 0.0052 17.2 4.0 0.0061 17.0 4.0 1.2 1 0 0 1 1 1 1 Fungal Transforming acidic coiled-coil (TACC) proteins YabA PF06156.13 NODE_74633_length_211_cov_2.573864_g66692_i0reverse_frame_3 - 0.017 15.7 6.2 0.02 15.5 6.2 1.1 1 0 0 1 1 1 0 Initiation control protein YabA DUF4954 PF16314.5 NODE_74633_length_211_cov_2.573864_g66692_i0forward_frame_3 - 3.2 5.8 5.8 3.6 5.6 5.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Chloroa_b-bind PF00504.21 NODE_74632_length_211_cov_2.573864_g66691_i0reverse_frame_2 - 4e-08 34.0 0.0 4e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 Chlorophyll A-B binding protein ANAPC4_WD40 PF12894.7 NODE_74630_length_211_cov_2.579545_g66689_i0forward_frame_3 - 0.0036 17.6 0.0 0.0046 17.2 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Leader_CPA1 PF08252.11 NODE_74629_length_211_cov_2.585227_g66688_i0forward_frame_2 - 4 6.9 9.1 0.63 9.5 1.0 2.4 2 0 0 2 2 2 0 arg-2/CPA1 leader peptide DTC PF18102.1 NODE_74628_length_211_cov_2.590909_g66687_i0reverse_frame_2 - 9.2e-10 38.8 0.2 1.4e-09 38.1 0.2 1.3 1 0 0 1 1 1 1 Deltex C-terminal domain Peptidase_C24 PF03510.14 NODE_74625_length_211_cov_2.710227_g66684_i0reverse_frame_2 - 0.087 13.3 0.0 0.1 13.1 0.0 1.1 1 0 0 1 1 1 0 2C endopeptidase (C24) cysteine protease family DUF3785 PF12653.7 NODE_74620_length_211_cov_2.778409_g66679_i0reverse_frame_3 - 0.012 15.8 0.9 0.017 15.2 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3785) SMI1_KNR4 PF09346.10 NODE_74618_length_211_cov_2.806818_g66677_i0reverse_frame_3 - 0.051 14.0 0.1 0.052 13.9 0.1 1.1 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) LolB PF03550.14 NODE_74617_length_211_cov_2.812500_g66676_i0reverse_frame_2 - 3.4e-18 66.1 0.1 3.6e-18 66.1 0.1 1.0 1 0 0 1 1 1 1 Outer membrane lipoprotein LolB FAA_hydrolase PF01557.18 NODE_74616_length_211_cov_2.852273_g66675_i0reverse_frame_2 - 2.9e-07 30.4 0.0 3.1e-07 30.3 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Lamprin PF06403.11 NODE_74615_length_211_cov_2.863636_g66674_i0forward_frame_3 - 3 7.8 7.0 2.9 7.9 1.0 2.0 1 1 1 2 2 2 0 Lamprin MRF_C2 PF13888.6 NODE_74614_length_211_cov_2.909091_g66673_i0reverse_frame_3 - 0.076 12.9 0.0 0.098 12.6 0.0 1.2 1 0 0 1 1 1 0 Myelin gene regulatory factor C-terminal domain 2 Ac81 PF05820.11 NODE_74612_length_211_cov_3.062500_g66671_i0reverse_frame_3 - 1.8 8.1 10.0 1.9 8.1 10.0 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 IBB PF01749.20 NODE_74611_length_211_cov_3.090909_g66670_i0reverse_frame_3 - 0.046 14.2 2.4 0.05 14.1 2.4 1.1 1 0 0 1 1 1 0 Importin beta binding domain DUF1564 PF07600.11 NODE_74611_length_211_cov_3.090909_g66670_i0reverse_frame_3 - 0.087 12.5 3.7 0.099 12.3 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) Methuselah_N PF06652.12 NODE_74607_length_211_cov_3.528409_g66666_i0forward_frame_2 - 0.18 11.7 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Methuselah N-terminus LAT PF15234.6 NODE_74606_length_211_cov_3.534091_g66665_i0reverse_frame_3 - 0.13 12.0 5.0 0.14 11.9 5.0 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells LRR19-TM PF15176.6 NODE_74606_length_211_cov_3.534091_g66665_i0reverse_frame_3 - 0.22 11.5 0.2 0.25 11.3 0.2 1.1 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Kelch_3 PF13415.6 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 7.6e-11 42.0 0.0 4.2e-09 36.5 0.0 2.0 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 1.8e-08 34.3 1.2 7.8e-05 22.6 0.3 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 6.9e-08 31.9 0.4 0.00014 21.4 0.2 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 8.6e-07 28.8 1.4 0.0083 16.1 0.6 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 2.1e-06 27.8 0.4 0.0011 19.2 0.1 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 NODE_74605_length_211_cov_3.568182_g66664_i0reverse_frame_2 - 1.8e-05 24.5 1.8 0.055 13.5 0.4 2.1 2 0 0 2 2 2 2 Kelch motif DUF4801 PF16059.5 NODE_74603_length_211_cov_4.511364_g66662_i0reverse_frame_2 - 0.0088 16.0 0.3 0.013 15.4 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4801) DUF4724 PF15852.5 NODE_74603_length_211_cov_4.511364_g66662_i0forward_frame_3 - 0.027 15.0 0.0 0.031 14.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4724) Hemocyanin_N PF03722.14 NODE_74602_length_211_cov_4.784091_g66661_i0reverse_frame_3 - 0.13 12.7 0.1 0.19 12.2 0.1 1.2 1 0 0 1 1 1 0 Hemocyanin, all-alpha domain Trp_syntA PF00290.20 NODE_74601_length_211_cov_4.982955_g66660_i0reverse_frame_2 - 3.3e-22 78.6 0.0 3.5e-22 78.5 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain Dynein_AAA_lid PF17852.1 NODE_74597_length_211_cov_7.971591_g66656_i0reverse_frame_2 - 0.12 12.5 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain DUF5480 PF17576.2 NODE_74596_length_211_cov_8.267045_g66655_i0reverse_frame_3 - 0.71 9.9 4.6 0.91 9.5 4.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5480) I-EGF_1 PF18372.1 NODE_74596_length_211_cov_8.267045_g66655_i0forward_frame_3 - 0.021 14.9 3.2 0.021 14.9 3.2 2.4 3 0 0 3 3 3 0 Integrin beta epidermal growth factor like domain 1 Calc_CGRP_IAPP PF00214.19 NODE_74594_length_211_cov_11.034091_g66653_i0reverse_frame_3 - 0.025 14.9 1.8 0.031 14.6 1.8 1.0 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family NICE-1 PF15845.5 NODE_74591_length_211_cov_23.295455_g66650_i0reverse_frame_2 - 3.5 8.5 8.3 16 6.3 2.7 2.1 1 1 1 2 2 2 0 Cysteine-rich C-terminal 1 family LisH PF08513.11 NODE_74589_length_211_cov_25.568182_g66648_i0reverse_frame_2 - 0.004 17.1 0.0 0.021 14.8 0.0 2.0 2 0 0 2 2 2 1 LisH SH3_2 PF07653.17 NODE_74585_length_211_cov_27.238636_g66644_i0forward_frame_2 - 0.77 9.5 2.9 1.1 9.0 2.9 1.4 1 1 0 1 1 1 0 Variant SH3 domain VESA1_N PF12785.7 NODE_74584_length_211_cov_29.289773_g66643_i0reverse_frame_2 - 1.4 7.8 12.1 1.4 7.8 12.1 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 UCH PF00443.29 NODE_74582_length_211_cov_30.352273_g66641_i0reverse_frame_3 - 0.082 12.4 0.1 0.089 12.3 0.1 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Ferlin_C PF16165.5 NODE_74580_length_211_cov_31.994318_g66639_i0reverse_frame_2 - 0.02 14.9 0.6 0.025 14.5 0.6 1.1 1 0 0 1 1 1 0 Ferlin C-terminus PetN PF03742.14 NODE_74579_length_211_cov_32.727273_g66638_i0forward_frame_2 - 0.12 12.2 0.1 0.18 11.7 0.1 1.2 1 0 0 1 1 1 0 PetN Toxin-deaminase PF14424.6 NODE_74576_length_211_cov_39.488636_g66635_i0forward_frame_2 - 0.001 19.2 0.2 0.0018 18.4 0.1 1.4 1 1 1 2 2 2 1 The BURPS668_1122 family of deaminases Acid_PPase PF12689.7 NODE_74574_length_211_cov_40.681818_g66633_i0reverse_frame_3 - 0.0052 16.6 0.0 0.0061 16.4 0.0 1.1 1 0 0 1 1 1 1 Acid Phosphatase DUF1322 PF07032.11 NODE_74573_length_211_cov_42.312500_g66632_i0reverse_frame_2 - 0.023 15.2 0.3 0.029 14.9 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1322) DUF4481 PF14800.6 NODE_74573_length_211_cov_42.312500_g66632_i0forward_frame_2 - 0.068 12.6 2.0 0.071 12.6 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) GP3 PF03076.14 NODE_74571_length_211_cov_43.517045_g66630_i0reverse_frame_2 - 0.15 12.1 2.1 0.2 11.7 2.1 1.1 1 0 0 1 1 1 0 Equine arteritis virus GP3 SpoVR PF04293.13 NODE_74570_length_211_cov_44.289773_g66629_i0forward_frame_2 - 0.3 9.7 4.7 0.33 9.6 4.7 1.0 1 0 0 1 1 1 0 SpoVR like protein Coilin_N PF15862.5 NODE_74570_length_211_cov_44.289773_g66629_i0forward_frame_2 - 4.2 7.2 11.9 4.4 7.1 11.9 1.1 1 0 0 1 1 1 0 Coilin N-terminus MWFE PF15879.5 NODE_74567_length_211_cov_45.460227_g66626_i0reverse_frame_3 - 0.13 12.5 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit DUF4752 PF15944.5 NODE_74562_length_211_cov_48.931818_g66621_i0reverse_frame_3 - 0.085 12.9 0.6 0.11 12.6 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) ABM PF03992.16 NODE_74561_length_211_cov_50.323864_g66620_i0reverse_frame_3 - 0.02 15.0 0.0 0.026 14.7 0.0 1.1 1 0 0 1 1 1 0 Antibiotic biosynthesis monooxygenase DUF5466 PF17554.2 NODE_74560_length_211_cov_50.869318_g66619_i0reverse_frame_2 - 0.032 14.4 0.0 0.049 13.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5466) Rtf2 PF04641.12 NODE_74559_length_211_cov_50.914773_g66618_i0forward_frame_2 - 0.067 12.5 0.0 0.074 12.4 0.0 1.0 1 0 0 1 1 1 0 Rtf2 RING-finger SLC3A2_N PF16028.5 NODE_74557_length_211_cov_53.164773_g66616_i0reverse_frame_3 - 0.0022 17.5 0.0 0.0031 17.0 0.0 1.3 1 0 0 1 1 1 1 Solute carrier family 3 member 2 N-terminus DAP10 PF07213.11 NODE_74557_length_211_cov_53.164773_g66616_i0reverse_frame_3 - 0.024 14.6 0.1 0.03 14.3 0.1 1.1 1 0 0 1 1 1 0 DAP10 membrane protein Gram_pos_anchor PF00746.21 NODE_74557_length_211_cov_53.164773_g66616_i0reverse_frame_3 - 0.041 13.8 1.1 0.053 13.5 1.1 1.2 1 0 0 1 1 1 0 LPXTG cell wall anchor motif PTR2 PF00854.21 NODE_74557_length_211_cov_53.164773_g66616_i0reverse_frame_3 - 0.046 12.5 0.0 0.053 12.3 0.0 1.0 1 0 0 1 1 1 0 POT family Toxin_6 PF05453.12 NODE_74557_length_211_cov_53.164773_g66616_i0forward_frame_3 - 0.015 15.7 1.1 0.015 15.7 1.1 1.6 2 0 0 2 2 2 0 BmTXKS1/BmP02 toxin family zf-CCCH_3 PF15663.5 NODE_74555_length_211_cov_57.767045_g66614_i0reverse_frame_3 - 0.14 12.4 0.0 0.16 12.2 0.0 1.0 1 0 0 1 1 1 0 Zinc-finger containing family TPR_3 PF07720.12 NODE_74551_length_211_cov_67.181818_g66610_i0reverse_frame_3 - 0.1 12.6 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Defensin_5 PF18251.1 NODE_74551_length_211_cov_67.181818_g66610_i0reverse_frame_2 - 3 8.0 12.8 1.5 9.0 10.2 1.8 2 0 0 2 2 2 0 Fungal defensin Copsin Synaptobrevin PF00957.21 NODE_74547_length_211_cov_68.062500_g66606_i0reverse_frame_2 - 0.16 11.8 1.1 0.2 11.5 1.1 1.1 1 0 0 1 1 1 0 Synaptobrevin UDPG_MGDP_dh PF00984.19 NODE_74543_length_211_cov_69.284091_g66602_i0reverse_frame_3 - 0.19 12.0 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, central domain Gmx_para_CXXCG PF09535.10 NODE_74543_length_211_cov_69.284091_g66602_i0forward_frame_3 - 0.091 12.0 0.2 0.099 11.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (Gmx_para_CXXCG) ASTN_2_hairpin PF18577.1 NODE_74543_length_211_cov_69.284091_g66602_i0forward_frame_2 - 0.11 12.7 0.3 0.16 12.1 0.3 1.3 1 0 0 1 1 1 0 Astrotactin-2 C-terminal beta-hairpin domain DUF2682 PF10909.8 NODE_74541_length_211_cov_71.164773_g66600_i0reverse_frame_2 - 0.082 13.4 0.4 0.093 13.2 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2682) LSDAT_euk PF18139.1 NODE_74539_length_211_cov_77.551136_g66598_i0reverse_frame_2 - 0.1 12.0 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 SLOG in TRPM Cas6b_C PF17262.2 NODE_74536_length_211_cov_86.715909_g66595_i0reverse_frame_3 - 0.0022 18.1 0.2 0.0026 17.8 0.2 1.0 1 0 0 1 1 1 1 Cas6b C-terminal domain zf-RING-like PF08746.11 NODE_74536_length_211_cov_86.715909_g66595_i0reverse_frame_3 - 0.091 13.1 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 RING-like domain K_channel_TID PF07941.11 NODE_74534_length_211_cov_94.437500_g66593_i0reverse_frame_2 - 0.017 15.6 2.7 0.019 15.4 2.7 1.2 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain DUF4559 PF15112.6 NODE_74528_length_211_cov_112.204545_g66587_i0reverse_frame_2 - 0.098 12.3 0.1 0.1 12.3 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) HPS3_N PF14761.6 NODE_74518_length_211_cov_166.744318_g66577_i0reverse_frame_3 - 0.015 14.8 0.1 0.017 14.7 0.1 1.1 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 3 DUF1106 PF06523.11 NODE_74518_length_211_cov_166.744318_g66577_i0forward_frame_3 - 0.0019 18.2 2.3 0.0021 18.1 2.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1106) DOR PF14839.6 NODE_74513_length_211_cov_355.727273_g66572_i0reverse_frame_2 - 0.015 15.3 0.0 0.016 15.2 0.0 1.0 1 0 0 1 1 1 0 DOR family zf-C2H2_11 PF16622.5 NODE_74513_length_211_cov_355.727273_g66572_i0forward_frame_2 - 0.083 12.7 0.9 0.083 12.7 0.9 1.9 2 0 0 2 2 2 0 zinc-finger C2H2-type YajC PF02699.15 NODE_74512_length_211_cov_995.221591_g66571_i0forward_frame_2 - 1.6 8.7 3.1 2.3 8.2 3.1 1.5 1 1 0 1 1 1 0 Preprotein translocase subunit Peptidase_S49_N PF08496.10 NODE_74509_length_211_cov_66333.897727_g66568_i0reverse_frame_3 - 2.3 8.3 7.9 2.5 8.2 7.9 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal CLIP_SPH_mas PF18398.1 NODE_74509_length_211_cov_66333.897727_g66568_i0reverse_frame_2 - 0.027 14.9 2.0 0.056 13.9 2.0 1.5 1 0 0 1 1 1 0 Clip-domain serine protease homolog masquerade DUF2663 PF10864.8 NODE_74508_length_211_cov_87743.380682_g66567_i0reverse_frame_2 - 0.00066 20.1 0.1 0.00069 20.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2663) MCRA PF06100.11 NODE_74508_length_211_cov_87743.380682_g66567_i0forward_frame_3 - 0.25 10.1 1.1 0.27 10.0 1.1 1.0 1 0 0 1 1 1 0 MCRA family AGS_C PF18134.1 NODE_74507_length_212_cov_0.824859_g66566_i0reverse_frame_3 - 0.0042 17.1 0.3 0.0045 17.0 0.3 1.0 1 0 0 1 1 1 1 Adenylyl/Guanylyl and SMODS C-terminal sensor domain DUF1005 PF06219.12 NODE_74506_length_212_cov_0.841808_g66565_i0forward_frame_2 - 0.15 11.1 1.0 0.17 10.9 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1005) DUF5549 PF17703.1 NODE_74503_length_212_cov_0.898305_g66562_i0reverse_frame_3 - 0.016 14.8 1.1 0.016 14.8 1.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) DUF3915 PF13054.6 NODE_74503_length_212_cov_0.898305_g66562_i0reverse_frame_3 - 0.18 11.8 4.0 0.24 11.4 4.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_74503_length_212_cov_0.898305_g66562_i0reverse_frame_3 - 4.2 5.5 5.4 4.9 5.3 5.4 1.1 1 0 0 1 1 1 0 Atrophin-1 family Atrophin-1 PF03154.15 NODE_74503_length_212_cov_0.898305_g66562_i0reverse_frame_2 - 3.3 5.9 4.2 4 5.6 4.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family SLBP_RNA_bind PF15247.6 NODE_74499_length_212_cov_0.898305_g66558_i0forward_frame_2 - 0.089 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain Flu_M2 PF00599.17 NODE_74495_length_212_cov_0.903955_g66554_i0reverse_frame_2 - 0.14 12.2 0.1 0.21 11.7 0.0 1.4 1 1 0 1 1 1 0 Influenza Matrix protein (M2) DUF4028 PF13220.6 NODE_74492_length_212_cov_0.903955_g66551_i0reverse_frame_2 - 0.04 13.7 0.2 0.052 13.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) GT87 PF09594.10 NODE_74492_length_212_cov_0.903955_g66551_i0forward_frame_2 - 0.017 14.8 0.1 0.018 14.8 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 87 DUF3852 PF12963.7 NODE_74492_length_212_cov_0.903955_g66551_i0forward_frame_2 - 0.019 15.3 0.7 0.02 15.2 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3852) LrgB PF04172.16 NODE_74492_length_212_cov_0.903955_g66551_i0forward_frame_2 - 0.045 13.3 0.6 0.053 13.0 0.6 1.0 1 0 0 1 1 1 0 LrgB-like family DUF1435 PF07256.12 NODE_74491_length_212_cov_0.903955_g66550_i0forward_frame_3 - 0.0049 16.9 0.0 0.0058 16.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1435) VEGF_C PF14554.6 NODE_74485_length_212_cov_0.903955_g66544_i0reverse_frame_2 - 0.0027 17.7 0.8 0.0027 17.7 0.8 1.6 1 1 1 2 2 2 1 VEGF heparin-binding domain Dynamin_M PF01031.20 NODE_74483_length_212_cov_0.903955_g66542_i0reverse_frame_2 - 1.5e-08 34.2 0.0 1.7e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 NODE_74483_length_212_cov_0.903955_g66542_i0reverse_frame_2 - 0.033 14.3 0.0 0.04 14.0 0.0 1.1 1 0 0 1 1 1 0 Dynamin family GAGA PF09237.11 NODE_74482_length_212_cov_0.903955_g66541_i0reverse_frame_2 - 0.19 11.6 1.0 0.56 10.1 1.0 1.8 1 1 0 1 1 1 0 GAGA factor Herpes_US9 PF06072.11 NODE_74481_length_212_cov_0.903955_g66540_i0forward_frame_2 - 0.074 12.9 0.9 0.1 12.5 0.9 1.2 1 0 0 1 1 1 0 Alphaherpesvirus tegument protein US9 NS3_envE PF02723.14 NODE_74479_length_212_cov_0.903955_g66538_i0forward_frame_2 - 0.44 10.7 10.4 0.54 10.4 10.4 1.3 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Gemini_mov PF01708.16 NODE_74479_length_212_cov_0.903955_g66538_i0forward_frame_2 - 0.88 9.4 2.8 1.2 9.0 2.8 1.2 1 0 0 1 1 1 0 Geminivirus putative movement protein ASC PF00858.24 NODE_74479_length_212_cov_0.903955_g66538_i0forward_frame_2 - 5.7 5.8 9.7 8.3 5.2 9.7 1.5 1 1 0 1 1 1 0 Amiloride-sensitive sodium channel Hyd_WA PF06462.12 NODE_74478_length_212_cov_0.903955_g66537_i0reverse_frame_2 - 6.7 6.8 7.2 11 6.1 7.2 1.5 1 1 0 1 1 1 0 Propeller Herpes_capsid PF06112.11 NODE_74478_length_212_cov_0.903955_g66537_i0forward_frame_2 - 7.4 6.6 7.7 9.1 6.3 7.7 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF1098 PF06497.11 NODE_74477_length_212_cov_0.903955_g66536_i0reverse_frame_2 - 0.11 13.0 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1098) DUF2207 PF09972.9 NODE_74474_length_212_cov_0.920904_g66533_i0reverse_frame_2 - 4.6 5.9 5.0 5 5.8 5.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Serglycin PF04360.12 NODE_74474_length_212_cov_0.920904_g66533_i0forward_frame_3 - 0.22 11.5 7.0 0.24 11.4 7.0 1.1 1 0 0 1 1 1 0 Serglycin CCDC106 PF15794.5 NODE_74474_length_212_cov_0.920904_g66533_i0forward_frame_3 - 9.4 5.9 9.8 10 5.7 9.8 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 YmzC PF14157.6 NODE_74473_length_212_cov_0.943503_g66532_i0reverse_frame_2 - 0.17 12.0 0.1 0.27 11.3 0.1 1.3 1 0 0 1 1 1 0 YmzC-like protein DUF521 PF04412.13 NODE_74473_length_212_cov_0.943503_g66532_i0forward_frame_3 - 0.096 11.4 0.8 0.1 11.3 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF521) HEV_ORF1 PF02444.16 NODE_74473_length_212_cov_0.943503_g66532_i0forward_frame_2 - 0.23 12.1 1.8 0.28 11.7 1.8 1.2 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) DUF2878 PF11086.8 NODE_74471_length_212_cov_0.954802_g66530_i0reverse_frame_2 - 0.032 14.4 0.4 0.036 14.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2878) Carb_kinase PF01256.17 NODE_74470_length_212_cov_0.960452_g66529_i0forward_frame_3 - 0.13 11.8 0.0 0.17 11.3 0.0 1.3 1 1 0 1 1 1 0 Carbohydrate kinase DUF5021 PF16424.5 NODE_74468_length_212_cov_0.977401_g66527_i0reverse_frame_2 - 0.14 11.9 0.1 0.16 11.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5021) Lactamase_B PF00753.27 NODE_74465_length_212_cov_1.022599_g66524_i0reverse_frame_2 - 2.7e-05 24.3 0.0 2.7e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 NODE_74465_length_212_cov_1.022599_g66524_i0reverse_frame_2 - 0.035 13.6 0.2 0.039 13.4 0.2 1.1 1 0 0 1 1 1 0 Beta-lactamase superfamily domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks386.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks386.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks386.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks386.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:36:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Beta_helix PF13229.6 NODE_74461_length_212_cov_1.056497_g66520_i0forward_frame_2 - 0.0013 18.6 2.2 0.0016 18.3 2.2 1.2 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_74461_length_212_cov_1.056497_g66520_i0forward_frame_2 - 0.0081 15.4 0.7 0.0089 15.3 0.7 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) DUF3591 PF12157.8 NODE_74459_length_212_cov_1.084746_g66518_i0reverse_frame_2 - 0.051 12.2 0.0 0.051 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3591) 3Beta_HSD PF01073.19 NODE_74456_length_212_cov_1.107345_g66515_i0reverse_frame_3 - 0.17 10.9 0.0 0.2 10.6 0.0 1.1 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Disintegrin PF00200.23 NODE_74456_length_212_cov_1.107345_g66515_i0forward_frame_2 - 0.42 11.4 5.1 0.16 12.8 2.7 1.5 1 1 1 2 2 2 0 Disintegrin IFN-gamma PF00714.17 NODE_74455_length_212_cov_1.107345_g66514_i0reverse_frame_2 - 0.0067 16.3 0.2 0.0073 16.2 0.2 1.0 1 0 0 1 1 1 1 Interferon gamma DEAD PF00270.29 NODE_74455_length_212_cov_1.107345_g66514_i0forward_frame_2 - 1.5e-06 28.1 0.0 3.2e-06 27.0 0.0 1.5 2 0 0 2 2 2 1 DEAD/DEAH box helicase CHZ PF09649.10 NODE_74451_length_212_cov_1.124294_g66510_i0reverse_frame_2 - 0.16 11.5 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Histone chaperone domain CHZ FHA PF00498.26 NODE_74450_length_212_cov_1.124294_g66509_i0reverse_frame_2 - 9.3e-10 38.7 0.0 1e-09 38.6 0.0 1.1 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 NODE_74450_length_212_cov_1.124294_g66509_i0reverse_frame_2 - 0.00082 19.6 0.0 0.0009 19.5 0.0 1.0 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Skp1 PF01466.19 NODE_74450_length_212_cov_1.124294_g66509_i0reverse_frame_2 - 0.051 13.7 0.3 0.15 12.2 0.3 1.7 1 1 0 1 1 1 0 Skp1 family, dimerisation domain BTB_2 PF02214.22 NODE_74445_length_212_cov_1.129944_g66504_i0reverse_frame_2 - 0.086 13.2 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 BTB/POZ domain Lamprin PF06403.11 NODE_74444_length_212_cov_1.129944_g66503_i0forward_frame_3 - 0.13 12.2 1.0 0.16 11.9 1.0 1.3 1 0 0 1 1 1 0 Lamprin Glyco_H_20C_C PF18088.1 NODE_74444_length_212_cov_1.129944_g66503_i0forward_frame_3 - 4.5 7.1 6.8 2.8 7.7 0.9 2.0 1 1 1 2 2 2 0 Glycoside Hydrolase 20C C-terminal domain NS3_envE PF02723.14 NODE_74441_length_212_cov_1.135593_g66500_i0forward_frame_3 - 0.031 14.4 2.0 0.035 14.2 2.0 1.1 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E TMEM154 PF15102.6 NODE_74441_length_212_cov_1.135593_g66500_i0forward_frame_3 - 0.068 13.1 0.4 0.078 12.9 0.4 1.0 1 0 0 1 1 1 0 TMEM154 protein family Cadherin_C_2 PF16492.5 NODE_74441_length_212_cov_1.135593_g66500_i0forward_frame_3 - 0.12 13.1 0.1 0.14 12.9 0.1 1.2 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal DUF5527 PF17665.1 NODE_74441_length_212_cov_1.135593_g66500_i0forward_frame_3 - 0.17 11.4 0.1 0.17 11.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5527) DUF3709 PF12493.8 NODE_74440_length_212_cov_1.146893_g66499_i0reverse_frame_3 - 0.018 15.0 0.6 0.027 14.5 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3709) PHD_2 PF13831.6 NODE_74439_length_212_cov_1.146893_g66498_i0forward_frame_2 - 0.033 13.7 0.3 0.063 12.8 0.3 1.5 1 0 0 1 1 1 0 PHD-finger Rota_NS6 PF04866.12 NODE_74437_length_212_cov_1.152542_g66496_i0forward_frame_2 - 0.028 14.6 0.5 0.034 14.3 0.5 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 6 CaMBD PF02888.16 NODE_74436_length_212_cov_1.152542_g66495_i0reverse_frame_2 - 0.042 14.0 0.1 0.053 13.7 0.1 1.1 1 0 0 1 1 1 0 Calmodulin binding domain Pyridox_oxase_2 PF12766.7 NODE_74432_length_212_cov_1.214689_g66491_i0reverse_frame_2 - 0.12 13.0 0.0 0.13 12.9 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase EVI2A PF05399.11 NODE_74426_length_212_cov_1.254237_g66485_i0reverse_frame_2 - 0.58 9.7 7.2 0.67 9.5 7.2 1.1 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) HHV-1_VABD PF16852.5 NODE_74421_length_212_cov_1.327684_g66480_i0reverse_frame_3 - 0.051 13.6 1.6 0.075 13.0 1.6 1.3 1 0 0 1 1 1 0 Herpes viral adaptor-to-host cellular mRNA binding domain PRRSV_2b PF07069.11 NODE_74419_length_212_cov_1.344633_g66478_i0reverse_frame_3 - 0.025 15.1 0.5 0.033 14.7 0.5 1.2 1 0 0 1 1 1 0 Porcine reproductive and respiratory syndrome virus 2b PSP1 PF04468.12 NODE_74416_length_212_cov_1.344633_g66475_i0reverse_frame_3 - 0.22 11.8 0.0 0.28 11.5 0.0 1.1 1 0 0 1 1 1 0 PSP1 C-terminal conserved region TPR_4 PF07721.14 NODE_74416_length_212_cov_1.344633_g66475_i0forward_frame_2 - 0.04 14.6 0.5 0.11 13.2 0.2 1.9 1 1 0 1 1 1 0 Tetratricopeptide repeat Arteri_Gl PF00951.18 NODE_74414_length_212_cov_1.350282_g66473_i0reverse_frame_2 - 0.29 10.9 4.2 0.32 10.8 4.2 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DNA_pol3_finger PF17657.1 NODE_74414_length_212_cov_1.350282_g66473_i0forward_frame_2 - 2.2e-26 92.2 0.3 2.4e-26 92.1 0.3 1.0 1 0 0 1 1 1 1 Bacterial DNA polymerase III alpha subunit finger domain LELP1 PF15042.6 NODE_74407_length_212_cov_1.355932_g66466_i0forward_frame_3 - 0.078 13.4 0.1 0.084 13.3 0.1 1.1 1 0 0 1 1 1 0 Late cornified envelope-like proline-rich protein 1 7TM_GPCR_Str PF10326.9 NODE_74406_length_212_cov_1.355932_g66465_i0reverse_frame_3 - 0.034 13.5 4.0 0.035 13.4 4.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Str TMEM18 PF14770.6 NODE_74405_length_212_cov_1.355932_g66464_i0reverse_frame_3 - 0.018 15.0 0.9 0.02 14.9 0.9 1.1 1 0 0 1 1 1 0 Transmembrane protein 18 GED PF02212.18 NODE_74403_length_212_cov_1.355932_g66462_i0reverse_frame_2 - 0.033 14.3 0.5 0.04 14.1 0.5 1.0 1 0 0 1 1 1 0 Dynamin GTPase effector domain Gemini_mov PF01708.16 NODE_74403_length_212_cov_1.355932_g66462_i0forward_frame_2 - 0.18 11.6 0.9 0.25 11.1 0.9 1.4 1 1 0 1 1 1 0 Geminivirus putative movement protein DUF2207 PF09972.9 NODE_74403_length_212_cov_1.355932_g66462_i0forward_frame_2 - 6.8 5.3 6.6 7.5 5.2 6.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TSP_1 PF00090.19 NODE_74401_length_212_cov_1.355932_g66460_i0forward_frame_2 - 8.2e-05 22.8 1.6 0.00014 22.0 1.6 1.4 1 0 0 1 1 1 1 Thrombospondin type 1 domain USP8_interact PF08941.10 NODE_74397_length_212_cov_1.355932_g66456_i0forward_frame_3 - 0.18 11.6 2.5 0.18 11.6 2.5 1.0 1 0 0 1 1 1 0 USP8 interacting YabA PF06156.13 NODE_74397_length_212_cov_1.355932_g66456_i0forward_frame_3 - 0.91 10.2 7.0 1.1 10.0 7.0 1.1 1 0 0 1 1 1 0 Initiation control protein YabA UPF0242 PF06785.11 NODE_74397_length_212_cov_1.355932_g66456_i0forward_frame_3 - 1.9 8.5 11.8 2 8.5 11.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DivIC PF04977.15 NODE_74397_length_212_cov_1.355932_g66456_i0forward_frame_3 - 3.3 7.6 10.0 4.6 7.1 8.0 1.9 1 1 1 2 2 2 0 Septum formation initiator Kinesin PF00225.23 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 6e-21 74.7 1.6 6.6e-21 74.6 1.6 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 2.7e-14 53.3 0.1 3.2e-14 53.1 0.1 1.0 1 0 0 1 1 1 1 Microtubule binding AAA_30 PF13604.6 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.004 16.9 0.2 0.0049 16.6 0.2 1.0 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.0064 16.0 0.3 0.014 14.9 0.3 1.6 1 1 1 2 2 2 1 P-loop containing dynein motor region ATPase PF06745.13 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.054 12.8 0.1 0.059 12.7 0.1 1.1 1 0 0 1 1 1 0 KaiC ResIII PF04851.15 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.07 13.1 0.2 0.074 13.0 0.2 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit T2SSE PF00437.20 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.074 12.1 0.1 0.084 11.9 0.1 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_24 PF13479.6 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.097 12.4 0.2 0.12 12.0 0.2 1.1 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.13 11.3 0.2 0.15 11.2 0.2 1.0 1 0 0 1 1 1 0 PIF1-like helicase AAA_22 PF13401.6 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.14 12.4 0.1 0.19 12.0 0.1 1.2 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.15 11.8 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain PhoH PF02562.16 NODE_74396_length_212_cov_1.384181_g66455_i0reverse_frame_2 - 0.17 11.3 0.2 0.19 11.1 0.2 1.1 1 0 0 1 1 1 0 PhoH-like protein DUF5082 PF16888.5 NODE_74395_length_212_cov_1.389831_g66454_i0forward_frame_2 - 0.0041 17.4 2.8 0.0047 17.2 2.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) Mntp PF02659.15 NODE_74392_length_212_cov_1.418079_g66451_i0reverse_frame_2 - 3.5e-18 65.8 14.0 3.9e-18 65.7 14.0 1.0 1 0 0 1 1 1 1 Putative manganese efflux pump SfLAP PF11139.8 NODE_74392_length_212_cov_1.418079_g66451_i0reverse_frame_2 - 0.19 11.1 5.5 0.2 11.0 5.5 1.0 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein TcdA_TcdB_pore PF12920.7 NODE_74392_length_212_cov_1.418079_g66451_i0reverse_frame_2 - 1.7 6.8 4.3 2 6.6 4.3 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF5048 PF16467.5 NODE_74389_length_212_cov_1.423729_g66448_i0reverse_frame_3 - 0.072 13.4 0.2 0.19 12.0 0.1 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5048) SLC3A2_N PF16028.5 NODE_74385_length_212_cov_1.440678_g66444_i0forward_frame_3 - 0.0022 17.5 0.2 0.0022 17.5 0.2 1.6 2 0 0 2 2 2 1 Solute carrier family 3 member 2 N-terminus DUF4144 PF13642.6 NODE_74383_length_212_cov_1.446328_g66442_i0reverse_frame_3 - 0.032 14.8 1.2 0.035 14.7 1.2 1.2 1 0 0 1 1 1 0 protein structure with unknown function DUF2797 PF10977.8 NODE_74379_length_212_cov_1.480226_g66438_i0forward_frame_2 - 1.1e-30 107.3 0.5 1.1e-30 107.2 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2797) Tmemb_9 PF05434.11 NODE_74375_length_212_cov_1.514124_g66434_i0forward_frame_2 - 0.061 13.2 0.4 0.064 13.2 0.4 1.0 1 0 0 1 1 1 0 TMEM9 TMEM192 PF14802.6 NODE_74374_length_212_cov_1.525424_g66433_i0reverse_frame_3 - 0.0028 16.8 0.4 0.0029 16.7 0.4 1.1 1 0 0 1 1 1 1 TMEM192 family AAA_26 PF13500.6 NODE_74372_length_212_cov_1.531073_g66431_i0reverse_frame_2 - 0.12 12.2 0.1 0.14 12.0 0.1 1.0 1 0 0 1 1 1 0 AAA domain MucBP_2 PF17965.1 NODE_74369_length_212_cov_1.548023_g66428_i0forward_frame_3 - 0.34 11.5 6.2 1.9 9.1 6.2 1.9 1 1 0 1 1 1 0 Mucin binding domain Ion_trans PF00520.31 NODE_74368_length_212_cov_1.559322_g66427_i0forward_frame_2 - 0.55 9.4 1.9 0.68 9.1 1.9 1.1 1 0 0 1 1 1 0 Ion transport protein PET PF06297.14 NODE_74367_length_212_cov_1.564972_g66426_i0reverse_frame_2 - 0.049 13.9 0.0 0.054 13.8 0.0 1.1 1 0 0 1 1 1 0 PET Domain PRT_C PF08372.10 NODE_74367_length_212_cov_1.564972_g66426_i0forward_frame_3 - 0.27 11.0 3.6 0.3 10.8 3.6 1.1 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal InaF-motif PF15018.6 NODE_74367_length_212_cov_1.564972_g66426_i0forward_frame_2 - 0.3 11.0 0.3 0.3 11.0 0.3 2.4 2 1 0 2 2 2 0 TRP-interacting helix ComC PF03047.14 NODE_74366_length_212_cov_1.570621_g66425_i0forward_frame_3 - 0.1 12.4 1.1 0.19 11.5 1.1 1.4 1 0 0 1 1 1 0 COMC family NADH-G_4Fe-4S_3 PF10588.9 NODE_74363_length_212_cov_1.576271_g66422_i0reverse_frame_3 - 0.0048 16.4 1.4 0.0078 15.7 1.4 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF4051 PF13260.6 NODE_74363_length_212_cov_1.576271_g66422_i0forward_frame_2 - 0.87 9.4 3.3 0.42 10.4 0.4 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF4051) DUF3083 PF11281.8 NODE_74357_length_212_cov_1.581921_g66416_i0reverse_frame_2 - 0.094 12.0 0.1 0.099 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3083) RIFIN PF02009.16 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 8.3e-05 22.6 0.2 8.3e-05 22.6 0.2 1.0 1 0 0 1 1 1 1 Rifin TMEM154 PF15102.6 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.015 15.2 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 TMEM154 protein family EssA PF10661.9 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.016 15.0 0.3 0.017 14.9 0.3 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA ECSCR PF15820.5 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.022 14.6 0.7 0.024 14.4 0.7 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Amnionless PF14828.6 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.059 12.2 0.2 0.061 12.2 0.2 1.0 1 0 0 1 1 1 0 Amnionless VSP PF03302.13 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.1 11.4 0.5 0.1 11.4 0.5 1.0 1 0 0 1 1 1 0 Giardia variant-specific surface protein ASFV_J13L PF05568.11 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.19 11.5 0.4 0.2 11.4 0.4 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein Stevor PF17410.2 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.25 10.9 0.5 0.28 10.7 0.5 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Alpha_E1_glycop PF01589.16 NODE_74356_length_212_cov_1.581921_g66415_i0forward_frame_3 - 0.78 8.3 2.8 0.85 8.2 2.8 1.0 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein Peptidase_S74 PF13884.6 NODE_74355_length_212_cov_1.581921_g66414_i0reverse_frame_3 - 0.039 14.3 0.9 0.072 13.4 0.9 1.5 1 0 0 1 1 1 0 Chaperone of endosialidase Phosphodiest PF01663.22 NODE_74355_length_212_cov_1.581921_g66414_i0forward_frame_2 - 0.046 13.3 0.2 0.051 13.2 0.2 1.0 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase Ni_hydr_CYTB PF01292.20 NODE_74349_length_212_cov_1.632768_g66408_i0forward_frame_3 - 0.00038 20.1 0.4 0.00041 20.0 0.4 1.0 1 0 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4620 PF15399.6 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_3 - 0.096 13.0 3.6 0.12 12.8 3.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4620) HemY_N PF07219.13 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_3 - 0.14 12.4 2.3 0.18 12.0 2.3 1.2 1 0 0 1 1 1 0 HemY protein N-terminus TT_ORF1 PF02956.14 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_3 - 8.6 4.9 14.8 8.8 4.9 14.8 1.0 1 0 0 1 1 1 0 TT viral orf 1 U1snRNP70_N PF12220.8 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_2 - 0.017 15.8 0.7 0.019 15.6 0.7 1.1 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal AP3D1 PF06375.11 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_2 - 0.032 14.5 4.3 0.029 14.6 4.3 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Protocadherin PF08374.11 NODE_74347_length_212_cov_1.655367_g66406_i0reverse_frame_2 - 0.1 12.6 1.3 0.11 12.5 1.3 1.0 1 0 0 1 1 1 0 Protocadherin DUF4013 PF13197.6 NODE_74347_length_212_cov_1.655367_g66406_i0forward_frame_2 - 0.0034 17.3 0.2 0.0035 17.2 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4013) Alpha_kinase PF02816.18 NODE_74345_length_212_cov_1.666667_g66404_i0forward_frame_2 - 0.1 12.7 0.5 0.13 12.4 0.5 1.1 1 0 0 1 1 1 0 Alpha-kinase family HisKA PF00512.25 NODE_74340_length_212_cov_1.711864_g66399_i0forward_frame_3 - 1.1e-05 25.4 0.0 1.4e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain FhuF_C PF11575.8 NODE_74338_length_212_cov_1.745763_g66397_i0forward_frame_2 - 0.09 12.7 1.1 0.09 12.7 1.1 2.2 3 0 0 3 3 3 0 FhuF 2Fe-2S C-terminal domain FliE PF02049.18 NODE_74335_length_212_cov_1.757062_g66394_i0reverse_frame_3 - 0.033 14.3 0.4 0.12 12.5 0.2 1.8 1 1 1 2 2 2 0 Flagellar hook-basal body complex protein FliE DNA_pol_viral_N PF00242.17 NODE_74335_length_212_cov_1.757062_g66394_i0forward_frame_2 - 0.24 10.9 4.6 0.23 10.9 4.6 1.0 1 0 0 1 1 1 0 DNA polymerase (viral) N-terminal domain BCCT PF02028.17 NODE_74334_length_212_cov_1.768362_g66393_i0forward_frame_2 - 4.1e-30 104.7 1.4 4.4e-30 104.6 1.4 1.0 1 0 0 1 1 1 1 BCCT, betaine/carnitine/choline family transporter PAP2 PF01569.21 NODE_74334_length_212_cov_1.768362_g66393_i0forward_frame_2 - 0.061 13.1 0.3 0.067 12.9 0.3 1.1 1 0 0 1 1 1 0 PAP2 superfamily DsbB PF02600.16 NODE_74333_length_212_cov_1.768362_g66392_i0forward_frame_3 - 1.1e-09 38.9 3.2 1.2e-09 38.8 3.2 1.0 1 0 0 1 1 1 1 Disulfide bond formation protein DsbB HEAT PF02985.22 NODE_74333_length_212_cov_1.768362_g66392_i0forward_frame_2 - 0.077 13.3 0.3 16 6.1 0.0 2.2 2 0 0 2 2 2 0 HEAT repeat Lamprin PF06403.11 NODE_74329_length_212_cov_1.785311_g66388_i0forward_frame_2 - 0.035 14.1 0.1 0.042 13.8 0.1 1.2 1 0 0 1 1 1 0 Lamprin XRCC4 PF06632.12 NODE_74328_length_212_cov_1.785311_g66387_i0forward_frame_3 - 0.037 12.9 6.2 0.039 12.8 6.2 1.0 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 DUF1682 PF07946.14 NODE_74328_length_212_cov_1.785311_g66387_i0forward_frame_3 - 1.1 8.4 10.0 1.1 8.4 10.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Med19 PF10278.9 NODE_74328_length_212_cov_1.785311_g66387_i0forward_frame_3 - 2.3 8.1 11.1 2.5 8.0 11.1 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Presenilin PF01080.17 NODE_74328_length_212_cov_1.785311_g66387_i0forward_frame_3 - 7.3 5.2 5.1 7.4 5.2 5.1 1.0 1 0 0 1 1 1 0 Presenilin CST-I PF06002.12 NODE_74327_length_212_cov_1.785311_g66386_i0reverse_frame_3 - 0.027 14.2 1.1 0.028 14.2 1.1 1.0 1 0 0 1 1 1 0 Alpha-2,3-sialyltransferase (CST-I) DUF3644 PF12358.8 NODE_74327_length_212_cov_1.785311_g66386_i0reverse_frame_3 - 0.047 14.2 0.6 0.069 13.6 0.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3644) Macro PF01661.21 NODE_74327_length_212_cov_1.785311_g66386_i0reverse_frame_3 - 0.13 12.3 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Macro domain partial_CstF PF15861.5 NODE_74325_length_212_cov_1.802260_g66384_i0forward_frame_3 - 0.082 12.7 0.0 0.096 12.5 0.0 1.3 1 0 0 1 1 1 0 Partial cleavage stimulation factor domain DUF4922 PF16269.5 NODE_74325_length_212_cov_1.802260_g66384_i0forward_frame_2 - 0.09 12.5 0.3 0.29 10.9 0.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4922) DUF4905 PF16248.5 NODE_74325_length_212_cov_1.802260_g66384_i0forward_frame_2 - 0.14 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4905) DUF1477 PF07346.11 NODE_74321_length_212_cov_1.807910_g66380_i0forward_frame_3 - 0.34 11.2 3.5 0.35 11.1 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1477) Na_H_Exchanger PF00999.21 NODE_74316_length_212_cov_1.836158_g66375_i0reverse_frame_3 - 3.3e-05 22.9 0.4 3.6e-05 22.8 0.4 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CAAD PF14159.6 NODE_74316_length_212_cov_1.836158_g66375_i0reverse_frame_3 - 0.067 13.0 0.0 0.11 12.4 0.0 1.4 1 1 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase zf-C3H1 PF10650.9 NODE_74312_length_212_cov_1.887006_g66371_i0forward_frame_3 - 0.2 11.4 1.3 0.2 11.4 1.3 2.0 3 0 0 3 3 3 0 Putative zinc-finger domain TRAM1 PF08390.11 NODE_74311_length_212_cov_1.898305_g66370_i0forward_frame_2 - 0.21 11.3 2.0 0.28 10.9 1.3 1.7 1 1 0 1 1 1 0 TRAM1-like protein DUF1700 PF08006.11 NODE_74311_length_212_cov_1.898305_g66370_i0forward_frame_2 - 7 6.1 11.8 8 6.0 11.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Man-6-P_recep PF02157.15 NODE_74310_length_212_cov_1.903955_g66369_i0reverse_frame_2 - 0.32 10.1 1.9 0.35 9.9 1.9 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate receptor NPV_P10 PF05531.12 NODE_74306_length_212_cov_1.960452_g66365_i0reverse_frame_3 - 0.024 15.1 0.1 0.034 14.6 0.1 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF1409 PF07197.12 NODE_74306_length_212_cov_1.960452_g66365_i0reverse_frame_3 - 0.085 12.7 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1409) DUF1664 PF07889.12 NODE_74306_length_212_cov_1.960452_g66365_i0reverse_frame_3 - 0.095 12.7 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Adeno_E3_14_5 PF04834.12 NODE_74304_length_212_cov_1.988701_g66363_i0forward_frame_3 - 0.011 16.3 1.0 0.017 15.7 1.0 1.3 1 0 0 1 1 1 0 Early E3 14.5 kDa protein DUF4070 PF13282.6 NODE_74304_length_212_cov_1.988701_g66363_i0forward_frame_2 - 0.025 14.7 0.1 0.027 14.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) TerY_C PF15616.6 NODE_74303_length_212_cov_1.988701_g66362_i0forward_frame_2 - 0.021 14.9 1.5 0.021 14.9 1.5 1.5 1 1 1 2 2 2 0 TerY-C metal binding domain RAI16-like PF10257.9 NODE_74300_length_212_cov_2.028249_g66359_i0reverse_frame_2 - 0.00044 19.2 0.0 0.00047 19.1 0.0 1.0 1 0 0 1 1 1 1 Retinoic acid induced 16-like protein SpvD PF05563.12 NODE_74298_length_212_cov_2.028249_g66357_i0reverse_frame_3 - 0.17 11.5 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Salmonella plasmid virulence protein SpvD zf-RING_5 PF14634.6 NODE_74296_length_212_cov_2.062147_g66355_i0reverse_frame_3 - 0.0074 16.2 0.1 0.011 15.6 0.1 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Met_10 PF02475.16 NODE_74296_length_212_cov_2.062147_g66355_i0reverse_frame_2 - 0.11 12.2 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein DUF4418 PF14387.6 NODE_74295_length_212_cov_2.073446_g66354_i0reverse_frame_3 - 0.0031 17.7 0.3 0.0035 17.5 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4418) DUF5493 PF17597.2 NODE_74293_length_212_cov_2.084746_g66352_i0forward_frame_3 - 0.071 13.4 0.2 0.074 13.3 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5493) Period_C PF12114.8 NODE_74286_length_212_cov_2.141243_g66345_i0forward_frame_3 - 0.027 14.0 0.3 0.03 13.9 0.3 1.0 1 0 0 1 1 1 0 Period protein 2/3C-terminal region PDR_CDR PF06422.12 NODE_74285_length_212_cov_2.175141_g66344_i0reverse_frame_2 - 0.064 13.2 0.0 0.064 13.2 0.0 1.1 1 0 0 1 1 1 0 CDR ABC transporter Ski_Sno PF02437.17 NODE_74284_length_212_cov_2.180791_g66343_i0forward_frame_3 - 0.1 12.3 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 SKI/SNO/DAC family Ras PF00071.22 NODE_74283_length_212_cov_2.197740_g66342_i0forward_frame_3 - 5e-08 32.7 0.0 5.1e-08 32.7 0.0 1.0 1 0 0 1 1 1 1 Ras family HrpF PF06266.12 NODE_74283_length_212_cov_2.197740_g66342_i0forward_frame_3 - 0.077 13.3 0.1 0.088 13.1 0.1 1.1 1 0 0 1 1 1 0 HrpF protein DUF1556 PF07590.11 NODE_74279_length_212_cov_2.248588_g66338_i0forward_frame_2 - 0.043 14.1 0.0 0.048 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1556) ZnuA PF01297.17 NODE_74278_length_212_cov_2.254237_g66337_i0forward_frame_3 - 1.3e-11 44.4 0.0 1.3e-11 44.4 0.0 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic VPS9 PF02204.18 NODE_74274_length_212_cov_2.338983_g66333_i0reverse_frame_2 - 6e-07 29.6 0.0 8.1e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain Tubulin-binding PF00418.19 NODE_74270_length_212_cov_2.463277_g66329_i0reverse_frame_2 - 0.064 13.3 0.1 0.13 12.3 0.1 1.5 1 0 0 1 1 1 0 Tau and MAP protein, tubulin-binding repeat DASH_Spc19 PF08287.11 NODE_74270_length_212_cov_2.463277_g66329_i0forward_frame_3 - 0.031 14.2 0.0 0.035 14.0 0.0 1.1 1 0 0 1 1 1 0 Spc19 UPF0184 PF03670.13 NODE_74268_length_212_cov_2.485876_g66327_i0reverse_frame_3 - 0.028 14.8 1.7 0.033 14.6 1.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0184) DUF3573 PF12097.8 NODE_74268_length_212_cov_2.485876_g66327_i0reverse_frame_3 - 0.18 10.6 0.5 0.19 10.5 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) FXMRP1_C_core PF12235.8 NODE_74266_length_212_cov_2.502825_g66325_i0forward_frame_2 - 0.15 12.7 4.9 0.16 12.6 4.9 1.1 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal CCSMST1 PF15013.6 NODE_74264_length_212_cov_2.536723_g66323_i0forward_frame_2 - 0.024 14.8 0.3 0.024 14.8 0.3 1.6 2 0 0 2 2 2 0 CCSMST1 family Peptidase_C2 PF00648.21 NODE_74262_length_212_cov_2.548023_g66321_i0forward_frame_2 - 1.1e-09 37.7 0.0 1.1e-09 37.7 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease RNase_H PF00075.24 NODE_74262_length_212_cov_2.548023_g66321_i0forward_frame_2 - 0.16 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 RNase H ZZ PF00569.17 NODE_74258_length_212_cov_2.615819_g66317_i0forward_frame_3 - 0.03 14.1 9.3 0.041 13.7 9.3 1.2 1 0 0 1 1 1 0 Zinc finger, ZZ type UPF0113_N PF17833.1 NODE_74257_length_212_cov_2.677966_g66316_i0reverse_frame_2 - 0.057 14.0 0.3 0.067 13.8 0.3 1.1 1 0 0 1 1 1 0 UPF0113 Pre-PUA domain DUF713 PF05218.14 NODE_74257_length_212_cov_2.677966_g66316_i0forward_frame_3 - 0.03 14.1 0.1 0.03 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF713) DUF4131 PF13567.6 NODE_74255_length_212_cov_2.740113_g66314_i0forward_frame_2 - 0.098 12.3 0.6 0.1 12.3 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Fer4_17 PF13534.6 NODE_74253_length_212_cov_2.762712_g66312_i0forward_frame_2 - 0.37 11.4 8.8 0.74 10.4 8.8 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.27 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.00044 19.9 2.0 0.001 18.8 2.0 1.6 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.00081 19.4 1.9 0.00081 19.4 1.9 2.1 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_13 PF13370.6 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.0073 16.8 1.5 0.01 16.3 0.3 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_21 PF14697.6 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.057 13.5 4.1 0.057 13.5 4.1 1.4 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_74251_length_212_cov_2.807910_g66310_i0forward_frame_3 - 0.06 13.5 3.2 0.06 13.5 3.2 1.8 1 1 1 2 2 1 0 4Fe-4S dicluster domain MAPKK1_Int PF08923.10 NODE_74250_length_212_cov_2.813559_g66309_i0forward_frame_3 - 0.049 13.4 0.1 0.062 13.1 0.1 1.0 1 0 0 1 1 1 0 Mitogen-activated protein kinase kinase 1 interacting Lamprin PF06403.11 NODE_74247_length_212_cov_2.898305_g66306_i0forward_frame_2 - 0.0062 16.5 1.1 0.0069 16.3 1.1 1.1 1 0 0 1 1 1 1 Lamprin BPD_transp_1 PF00528.22 NODE_74239_length_212_cov_3.248588_g66298_i0forward_frame_3 - 1.3e-12 47.8 0.1 1.4e-12 47.8 0.1 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Na_H_antiport_1 PF06965.12 NODE_74237_length_212_cov_3.344633_g66296_i0forward_frame_2 - 7.6e-23 81.0 8.6 8.2e-23 80.9 8.6 1.0 1 0 0 1 1 1 1 Na+/H+ antiporter 1 THEG PF14912.6 NODE_74233_length_212_cov_3.564972_g66292_i0reverse_frame_2 - 0.04 14.4 0.1 0.054 13.9 0.1 1.5 1 1 0 1 1 1 0 Testicular haploid expressed repeat Pro_CA PF00484.19 NODE_74232_length_212_cov_4.096045_g66291_i0reverse_frame_3 - 1.4e-05 25.4 0.0 1.5e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase Dicty_CAD PF05720.12 NODE_74232_length_212_cov_4.096045_g66291_i0reverse_frame_3 - 0.095 12.7 0.0 0.14 12.2 0.0 1.3 1 1 0 1 1 1 0 Cell-cell adhesion domain DUF16 PF01519.16 NODE_74231_length_212_cov_4.129944_g66290_i0forward_frame_2 - 0.018 15.5 0.1 0.02 15.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 DUF4303 PF14136.6 NODE_74231_length_212_cov_4.129944_g66290_i0forward_frame_2 - 0.097 12.4 0.0 0.099 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) DC_STAMP PF07782.13 NODE_74224_length_212_cov_17.237288_g66283_i0reverse_frame_2 - 0.55 10.0 8.0 0.65 9.8 8.0 1.2 1 0 0 1 1 1 0 DC-STAMP-like protein zf-RVT PF13966.6 NODE_74223_length_212_cov_24.367232_g66282_i0forward_frame_3 - 0.056 14.2 1.7 0.066 13.9 1.7 1.2 1 0 0 1 1 1 0 zinc-binding in reverse transcriptase stn_TNFRSF12A PF12191.8 NODE_74221_length_212_cov_29.322034_g66280_i0reverse_frame_2 - 0.048 13.9 0.1 0.058 13.6 0.1 1.1 1 0 0 1 1 1 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain SAYSvFN PF10260.9 NODE_74217_length_212_cov_33.180791_g66276_i0reverse_frame_3 - 0.85 9.6 4.2 0.26 11.2 1.3 1.6 1 1 1 2 2 2 0 Uncharacterized conserved domain (SAYSvFN) Band_7_1 PF13421.6 NODE_74212_length_212_cov_38.203390_g66271_i0forward_frame_2 - 0.14 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 SPFH domain-Band 7 family DUF4719 PF15843.5 NODE_74211_length_212_cov_38.384181_g66270_i0reverse_frame_3 - 2.2 8.3 5.7 2.4 8.2 5.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) Zip PF02535.22 NODE_74209_length_212_cov_39.395480_g66268_i0reverse_frame_2 - 0.56 9.4 3.5 0.64 9.2 3.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter MRP_L53 PF10780.9 NODE_74206_length_212_cov_44.338983_g66265_i0forward_frame_3 - 0.016 15.4 0.1 0.022 14.9 0.1 1.2 1 0 0 1 1 1 0 39S ribosomal protein L53/MRP-L53 AAA_2 PF07724.14 NODE_74204_length_212_cov_46.683616_g66263_i0reverse_frame_3 - 0.031 14.4 0.1 0.032 14.4 0.1 1.1 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) DUF3931 PF13082.6 NODE_74201_length_212_cov_47.971751_g66260_i0reverse_frame_3 - 0.51 10.5 6.5 1.1 9.4 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3931) DUF2318 PF10080.9 NODE_74198_length_212_cov_51.372881_g66257_i0forward_frame_2 - 0.084 13.0 0.4 0.084 13.0 0.4 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) Cu2_monooxygen PF01082.20 NODE_74197_length_212_cov_51.514124_g66256_i0forward_frame_2 - 0.022 15.0 0.1 0.023 14.9 0.1 1.0 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain LHC PF00556.20 NODE_74197_length_212_cov_51.514124_g66256_i0forward_frame_2 - 0.17 12.1 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Antenna complex alpha/beta subunit Ski_Sno PF02437.17 NODE_74196_length_212_cov_51.790960_g66255_i0forward_frame_3 - 0.0045 16.7 0.2 0.0053 16.5 0.2 1.1 1 0 0 1 1 1 1 SKI/SNO/DAC family ATS3 PF06232.11 NODE_74196_length_212_cov_51.790960_g66255_i0forward_frame_2 - 0.16 11.9 0.0 0.19 11.7 0.0 1.0 1 0 0 1 1 1 0 Embryo-specific protein 3, (ATS3) DUF1242 PF06842.12 NODE_74190_length_212_cov_58.519774_g66249_i0forward_frame_2 - 0.024 14.4 1.7 0.045 13.5 1.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1242) CRAL_TRIO_N PF03765.15 NODE_74190_length_212_cov_58.519774_g66249_i0forward_frame_2 - 0.078 13.2 0.5 0.11 12.7 0.5 1.3 1 0 0 1 1 1 0 CRAL/TRIO, N-terminal domain Haemadin PF09065.10 NODE_74188_length_212_cov_61.548023_g66247_i0forward_frame_3 - 0.33 10.8 0.7 0.33 10.8 0.7 1.8 2 0 0 2 2 2 0 Haemadin Consortin_C PF15281.6 NODE_74182_length_212_cov_73.090395_g66241_i0forward_frame_2 - 0.14 12.2 0.5 0.17 11.9 0.5 1.1 1 0 0 1 1 1 0 Consortin C-terminus C1_2 PF03107.16 NODE_74178_length_212_cov_84.836158_g66237_i0forward_frame_2 - 0.15 12.4 5.1 3.9 7.9 0.5 2.2 2 0 0 2 2 2 0 C1 domain CAP_N PF01213.19 NODE_74176_length_212_cov_87.858757_g66235_i0reverse_frame_2 - 1.9 7.9 12.7 2.1 7.8 12.7 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_74176_length_212_cov_87.858757_g66235_i0reverse_frame_2 - 5.5 7.0 8.3 6.1 6.9 8.3 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator DUF2433 PF10360.9 NODE_74173_length_212_cov_105.892655_g66232_i0forward_frame_3 - 0.017 15.2 0.1 0.022 14.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) EBV-NA1 PF02905.14 NODE_74164_length_212_cov_150.576271_g66223_i0reverse_frame_2 - 0.23 11.3 0.7 0.25 11.1 0.7 1.1 1 0 0 1 1 1 0 Epstein Barr virus nuclear antigen-1, DNA-binding domain YacG PF03884.14 NODE_74161_length_212_cov_167.039548_g66220_i0forward_frame_2 - 0.039 13.7 0.4 0.059 13.1 0.4 1.4 1 1 0 1 1 1 0 DNA gyrase inhibitor YacG YIEGIA PF14045.6 NODE_74157_length_212_cov_208.271186_g66216_i0reverse_frame_2 - 0.071 11.9 0.0 0.075 11.9 0.0 1.0 1 0 0 1 1 1 0 YIEGIA protein DUF4131 PF13567.6 NODE_74156_length_212_cov_232.593220_g66215_i0reverse_frame_3 - 2.7 7.6 4.5 3.4 7.3 4.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Paired_CXXCH_1 PF09699.10 NODE_74156_length_212_cov_232.593220_g66215_i0forward_frame_2 - 0.013 15.2 0.7 0.13 12.0 0.0 2.2 1 1 1 2 2 2 0 Doubled CXXCH motif (Paired_CXXCH_1) VHP PF02209.19 NODE_74156_length_212_cov_232.593220_g66215_i0forward_frame_2 - 0.26 11.4 7.2 0.43 10.7 7.2 1.3 1 0 0 1 1 1 0 Villin headpiece domain Metallothio_PEC PF02068.16 NODE_74154_length_212_cov_281.802260_g66213_i0reverse_frame_3 - 0.02 15.2 2.3 0.024 15.0 2.3 1.1 1 0 0 1 1 1 0 Plant PEC family metallothionein PCP PF02429.15 NODE_74150_length_212_cov_7367.056497_g66209_i0forward_frame_3 - 2.7e-23 82.9 2.1 2.9e-23 82.8 2.1 1.0 1 0 0 1 1 1 1 Peridinin-chlorophyll A binding protein Zn_Tnp_IS1 PF03811.13 NODE_74146_length_213_cov_0.882022_g66205_i0reverse_frame_2 - 3.3 7.5 8.9 0.49 10.2 2.6 2.5 2 0 0 2 2 2 0 InsA N-terminal domain ADH_N_2 PF16884.5 NODE_74145_length_213_cov_0.893258_g66204_i0reverse_frame_2 - 0.19 11.6 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase DUF4186 PF13811.6 NODE_74145_length_213_cov_0.893258_g66204_i0forward_frame_2 - 0.22 11.6 2.5 0.28 11.2 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) FerI PF08151.12 NODE_74143_length_213_cov_0.893258_g66202_i0forward_frame_3 - 0.16 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 FerI (NUC094) domain Lamprin PF06403.11 NODE_74142_length_213_cov_0.893258_g66201_i0forward_frame_2 - 0.054 13.5 0.0 0.061 13.3 0.0 1.1 1 0 0 1 1 1 0 Lamprin DUF2835 PF11197.8 NODE_74138_length_213_cov_0.898876_g66197_i0forward_frame_2 - 0.059 13.2 0.0 0.09 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2835) DUF5533 PF17685.1 NODE_74136_length_213_cov_0.898876_g66195_i0reverse_frame_3 - 0.0028 18.1 3.9 0.003 18.0 3.9 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5533) Sua5_yciO_yrdC PF01300.18 NODE_74135_length_213_cov_0.898876_g66194_i0forward_frame_2 - 0.14 11.7 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Telomere recombination DUF4287 PF14117.6 NODE_74134_length_213_cov_0.898876_g66193_i0forward_frame_3 - 0.079 13.1 0.0 0.13 12.5 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4287) DUF4705 PF15788.5 NODE_74132_length_213_cov_0.898876_g66191_i0reverse_frame_2 - 0.031 14.5 0.4 0.21 11.8 0.5 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4705) DUF603 PF04645.12 NODE_74130_length_213_cov_0.898876_g66189_i0reverse_frame_3 - 0.12 12.1 0.1 0.12 12.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF603 DUF3896 PF13035.6 NODE_74129_length_213_cov_0.898876_g66188_i0forward_frame_3 - 0.017 15.3 0.4 0.024 14.8 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3896) Hep_core_N PF08290.11 NODE_74115_length_213_cov_0.994382_g66174_i0forward_frame_2 - 8 6.6 8.3 20 5.3 0.9 2.4 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger Vpu PF00558.19 NODE_74113_length_213_cov_1.022472_g66172_i0forward_frame_3 - 0.035 13.9 0.1 0.047 13.5 0.1 1.2 1 0 0 1 1 1 0 Vpu protein amfpi-1 PF12190.8 NODE_74112_length_213_cov_1.028090_g66171_i0forward_frame_3 - 0.031 14.9 1.0 0.035 14.7 1.0 1.2 1 0 0 1 1 1 0 Fungal protease inhibitor DUF2709 PF10915.8 NODE_74112_length_213_cov_1.028090_g66171_i0forward_frame_3 - 0.25 10.6 0.0 0.28 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2709) RAMP4 PF06624.12 NODE_74112_length_213_cov_1.028090_g66171_i0forward_frame_3 - 0.37 10.9 1.3 1.4 9.1 0.6 1.9 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 LRR_6 PF13516.6 NODE_74111_length_213_cov_1.073034_g66170_i0forward_frame_2 - 0.0013 18.6 0.1 0.016 15.2 0.0 2.2 2 0 0 2 2 2 1 Leucine Rich repeat LRR_1 PF00560.33 NODE_74111_length_213_cov_1.073034_g66170_i0forward_frame_2 - 0.0047 17.3 0.6 0.22 12.2 0.0 2.4 2 1 0 2 2 2 1 Leucine Rich Repeat LRR_4 PF12799.7 NODE_74111_length_213_cov_1.073034_g66170_i0forward_frame_2 - 0.0092 16.4 1.1 0.024 15.0 1.1 1.7 1 1 0 1 1 1 1 Leucine Rich repeats (2 copies) Phage_BR0599 PF09356.10 NODE_74103_length_213_cov_1.112360_g66162_i0reverse_frame_3 - 0.055 13.8 0.0 0.066 13.6 0.0 1.1 1 0 0 1 1 1 0 Phage conserved hypothetical protein BR0599 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks387.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks387.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks387.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks387.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Per1 PF04080.13 NODE_74101_length_213_cov_1.117978_g66160_i0reverse_frame_3 - 0.071 12.9 0.8 0.08 12.7 0.8 1.0 1 0 0 1 1 1 0 Per1-like family OTT_1508_deam PF14441.6 NODE_74100_length_213_cov_1.117978_g66159_i0reverse_frame_3 - 2.2 8.4 10.6 2.6 8.1 10.6 1.4 1 1 0 1 1 1 0 OTT_1508-like deaminase PapG_N PF03627.13 NODE_74100_length_213_cov_1.117978_g66159_i0reverse_frame_2 - 0.029 14.1 0.0 0.032 13.9 0.0 1.0 1 0 0 1 1 1 0 PapG carbohydrate binding domain PRMT5_C PF17286.2 NODE_74100_length_213_cov_1.117978_g66159_i0forward_frame_2 - 0.006 16.5 0.1 0.0062 16.4 0.1 1.0 1 0 0 1 1 1 1 PRMT5 oligomerisation domain HTH_38 PF13936.6 NODE_74095_length_213_cov_1.123596_g66154_i0reverse_frame_2 - 0.16 11.8 0.1 0.23 11.2 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain eIF3g PF12353.8 NODE_74094_length_213_cov_1.123596_g66153_i0forward_frame_2 - 1.1 9.6 5.4 0.23 11.9 2.3 1.4 1 1 1 2 2 2 0 Eukaryotic translation initiation factor 3 subunit G zinc-ribbons_6 PF07191.12 NODE_74091_length_213_cov_1.146067_g66150_i0reverse_frame_2 - 0.016 15.2 4.5 0.025 14.5 4.5 1.4 1 1 0 1 1 1 0 zinc-ribbons DUF1455 PF07306.11 NODE_74090_length_213_cov_1.162921_g66149_i0reverse_frame_3 - 0.08 12.9 0.0 0.092 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1455) EPO_TPO PF00758.18 NODE_74089_length_213_cov_1.162921_g66148_i0reverse_frame_3 - 0.11 12.5 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Erythropoietin/thrombopoietin Flu_PB1 PF00602.17 NODE_74085_length_213_cov_1.202247_g66144_i0forward_frame_3 - 0.19 9.8 0.0 0.19 9.8 0.0 1.1 1 0 0 1 1 1 0 Influenza RNA-dependent RNA polymerase subunit PB1 Zn_ribbon_17 PF17120.5 NODE_74082_length_213_cov_1.213483_g66141_i0forward_frame_2 - 0.068 12.8 1.9 1.6 8.4 0.3 2.2 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type DUF2670 PF10875.8 NODE_74081_length_213_cov_1.230337_g66140_i0forward_frame_2 - 0.033 14.3 0.2 0.038 14.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) Papo_T_antigen PF02380.15 NODE_74076_length_213_cov_1.275281_g66135_i0reverse_frame_3 - 0.035 14.2 1.2 0.039 14.1 1.2 1.1 1 0 0 1 1 1 0 T-antigen specific domain DUF2477 PF10631.9 NODE_74076_length_213_cov_1.275281_g66135_i0forward_frame_3 - 1 10.0 8.7 1.3 9.7 8.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2477) PAC1 PF16094.5 NODE_74075_length_213_cov_1.275281_g66134_i0forward_frame_3 - 0.091 11.9 1.6 0.1 11.7 1.6 1.1 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 tRNA-synt_1c PF00749.21 NODE_74070_length_213_cov_1.292135_g66129_i0forward_frame_2 - 0.049 12.5 0.3 0.052 12.4 0.3 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain PAP_PilO PF06864.12 NODE_74070_length_213_cov_1.292135_g66129_i0forward_frame_2 - 0.068 12.0 0.0 0.068 12.0 0.0 1.0 1 0 0 1 1 1 0 Pilin accessory protein (PilO) COX4 PF02936.14 NODE_74067_length_213_cov_1.303371_g66126_i0reverse_frame_2 - 0.039 14.0 0.0 0.048 13.7 0.0 1.0 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV FLYWCH PF04500.16 NODE_74066_length_213_cov_1.303371_g66125_i0forward_frame_2 - 0.016 15.3 1.0 0.021 14.9 1.0 1.1 1 0 0 1 1 1 0 FLYWCH zinc finger domain DUF3908 PF13048.6 NODE_74063_length_213_cov_1.337079_g66122_i0reverse_frame_3 - 0.027 14.7 1.0 0.029 14.7 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3908) TMIE PF16038.5 NODE_74060_length_213_cov_1.337079_g66119_i0reverse_frame_3 - 0.26 11.2 0.6 0.34 10.8 0.6 1.1 1 0 0 1 1 1 0 TMIE protein Sensor_TM1 PF13755.6 NODE_74059_length_213_cov_1.337079_g66118_i0reverse_frame_3 - 0.018 14.7 0.4 0.026 14.3 0.4 1.2 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain Keratin_matx PF04579.12 NODE_74058_length_213_cov_1.342697_g66117_i0reverse_frame_2 - 0.024 15.0 2.7 0.025 14.9 2.7 1.1 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein 2H-phosphodiest PF08975.10 NODE_74058_length_213_cov_1.342697_g66117_i0forward_frame_2 - 0.058 13.4 0.0 0.093 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1868) PIP49_C PF12260.8 NODE_74054_length_213_cov_1.342697_g66113_i0forward_frame_2 - 0.16 11.5 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 O_Spanin_T7 PF17531.2 NODE_74053_length_213_cov_1.342697_g66112_i0reverse_frame_2 - 0.009 16.0 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 1 outer-membrane spanin sub-unit Flg_hook PF02120.16 NODE_74051_length_213_cov_1.348315_g66110_i0reverse_frame_3 - 0.046 13.6 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Flagellar hook-length control protein FliK ParB_C PF18064.1 NODE_74051_length_213_cov_1.348315_g66110_i0reverse_frame_2 - 0.18 12.0 3.0 0.45 10.7 0.0 2.1 2 0 0 2 2 2 0 Centromere-binding protein ParB C-terminal DUF4131 PF13567.6 NODE_74051_length_213_cov_1.348315_g66110_i0forward_frame_3 - 6.5 6.4 5.3 7.4 6.2 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) HTH_Tnp_Tc3_1 PF11427.8 NODE_74050_length_213_cov_1.348315_g66109_i0reverse_frame_2 - 0.028 14.3 0.1 0.038 13.9 0.1 1.2 1 0 0 1 1 1 0 Tc3 transposase zf-C2H2_jaz PF12171.8 NODE_74050_length_213_cov_1.348315_g66109_i0reverse_frame_2 - 0.2 12.0 0.8 0.2 12.0 0.8 1.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding GNVR PF13807.6 NODE_74045_length_213_cov_1.348315_g66104_i0reverse_frame_3 - 0.15 12.0 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 G-rich domain on putative tyrosine kinase Noelin-1 PF12308.8 NODE_74045_length_213_cov_1.348315_g66104_i0forward_frame_3 - 0.075 13.0 0.3 0.092 12.7 0.3 1.2 1 0 0 1 1 1 0 Neurogenesis glycoprotein Orf78 PF06024.12 NODE_74042_length_213_cov_1.348315_g66101_i0reverse_frame_3 - 0.15 12.4 1.9 0.15 12.4 1.9 1.2 1 0 0 1 1 1 0 Orf78 (ac78) ODV-E18 PF10717.9 NODE_74042_length_213_cov_1.348315_g66101_i0reverse_frame_3 - 0.24 11.3 1.0 0.3 11.0 1.0 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 DUF5585 PF17823.1 NODE_74042_length_213_cov_1.348315_g66101_i0reverse_frame_3 - 0.29 10.0 1.9 0.33 9.9 1.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5585) zf-C3HC4_2 PF13923.6 NODE_74041_length_213_cov_1.348315_g66100_i0reverse_frame_3 - 0.98 9.3 7.3 5 7.0 0.8 2.5 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Clathrin_H_link PF13838.6 NODE_74040_length_213_cov_1.348315_g66099_i0reverse_frame_3 - 0.068 13.1 0.0 0.092 12.7 0.0 1.2 1 0 0 1 1 1 0 Clathrin-H-link DUF2844 PF11005.8 NODE_74040_length_213_cov_1.348315_g66099_i0reverse_frame_3 - 0.24 11.4 0.0 0.32 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2844) DUF4787 PF16029.5 NODE_74039_length_213_cov_1.348315_g66098_i0forward_frame_2 - 1.9 8.6 12.7 2.3 8.4 12.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4787) zf-LYAR PF08790.11 NODE_74035_length_213_cov_1.348315_g66094_i0reverse_frame_3 - 0.22 11.5 1.9 0.38 10.7 1.9 1.4 1 0 0 1 1 1 0 LYAR-type C2HC zinc finger Cytochrom_B559a PF00284.20 NODE_74035_length_213_cov_1.348315_g66094_i0reverse_frame_3 - 0.22 11.3 0.0 0.31 10.8 0.0 1.2 1 0 0 1 1 1 0 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit YolD PF08863.10 NODE_74035_length_213_cov_1.348315_g66094_i0reverse_frame_2 - 0.054 13.5 0.1 0.062 13.4 0.1 1.1 1 0 0 1 1 1 0 YolD-like protein Ku_PK_bind PF08785.11 NODE_74035_length_213_cov_1.348315_g66094_i0forward_frame_3 - 0.12 12.5 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Ku C terminal domain like ELMO_CED12 PF04727.13 NODE_74035_length_213_cov_1.348315_g66094_i0forward_frame_2 - 0.061 13.4 0.4 0.065 13.3 0.4 1.1 1 0 0 1 1 1 0 ELMO/CED-12 family CaATP_NAI PF12515.8 NODE_74034_length_213_cov_1.359551_g66093_i0forward_frame_2 - 0.16 11.6 1.5 5.7 6.7 0.1 2.2 2 0 0 2 2 2 0 Ca2+-ATPase N terminal autoinhibitory domain Carla_C4 PF01623.17 NODE_74032_length_213_cov_1.370787_g66091_i0reverse_frame_2 - 0.013 15.4 0.1 0.016 15.2 0.1 1.1 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein DUF4668 PF15701.5 NODE_74031_length_213_cov_1.376404_g66090_i0forward_frame_2 - 0.13 12.1 7.3 0.13 12.0 7.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) Cas_TM1802 PF09484.10 NODE_74031_length_213_cov_1.376404_g66090_i0forward_frame_2 - 0.84 8.3 4.4 0.84 8.3 4.4 1.0 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) DDE_Tnp_1_6 PF13751.6 NODE_74029_length_213_cov_1.393258_g66088_i0reverse_frame_2 - 0.058 13.6 0.6 0.056 13.7 0.6 1.1 1 0 0 1 1 1 0 Transposase DDE domain Defensin_5 PF18251.1 NODE_74023_length_213_cov_1.404494_g66082_i0forward_frame_2 - 1.7 8.8 8.1 0.34 11.0 4.8 1.5 2 0 0 2 2 2 0 Fungal defensin Copsin Glyco_hydro_10 PF00331.20 NODE_74020_length_213_cov_1.415730_g66079_i0reverse_frame_3 - 0.026 13.7 0.7 0.027 13.7 0.7 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 10 FLYWCH PF04500.16 NODE_74016_length_213_cov_1.438202_g66075_i0reverse_frame_2 - 0.16 12.1 2.4 0.21 11.7 2.4 1.3 1 0 0 1 1 1 0 FLYWCH zinc finger domain Prok-RING_1 PF14446.6 NODE_74016_length_213_cov_1.438202_g66075_i0forward_frame_3 - 2.5 8.1 9.1 0.19 11.7 2.9 2.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 RVT_1 PF00078.27 NODE_74016_length_213_cov_1.438202_g66075_i0forward_frame_2 - 0.032 13.7 0.0 0.035 13.6 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4833 PF16117.5 NODE_74013_length_213_cov_1.460674_g66072_i0reverse_frame_3 - 0.096 12.7 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4833) DUF3254 PF11630.8 NODE_74012_length_213_cov_1.466292_g66071_i0forward_frame_2 - 0.0071 16.5 0.1 0.01 16.0 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3254) XOO_2897-deam PF14440.6 NODE_74007_length_213_cov_1.494382_g66066_i0reverse_frame_3 - 0.075 13.1 1.0 0.085 13.0 1.0 1.2 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase DUF5527 PF17665.1 NODE_74004_length_213_cov_1.511236_g66063_i0reverse_frame_3 - 1.5 8.4 3.1 1.6 8.2 3.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5527) zf-CCCH PF00642.24 NODE_74003_length_213_cov_1.511236_g66062_i0reverse_frame_2 - 0.1 12.5 0.4 0.18 11.7 0.4 1.4 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) DUF2847 PF11009.8 NODE_74001_length_213_cov_1.528090_g66060_i0reverse_frame_2 - 0.17 11.8 0.1 0.17 11.8 0.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2847) DUF3093 PF11292.8 NODE_74001_length_213_cov_1.528090_g66060_i0forward_frame_3 - 0.61 10.3 5.7 0.67 10.2 5.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3093) TTc_toxin_rep PF18807.1 NODE_74001_length_213_cov_1.528090_g66060_i0forward_frame_2 - 0.079 12.8 0.1 0.14 12.0 0.1 1.5 1 0 0 1 1 1 0 Tripartite Tc toxins repeat Peptidase_S13 PF02113.15 NODE_74000_length_213_cov_1.528090_g66059_i0forward_frame_2 - 4.1e-07 29.1 0.2 4.4e-07 29.0 0.2 1.0 1 0 0 1 1 1 1 D-Ala-D-Ala carboxypeptidase 3 (S13) family TCR PF03638.15 NODE_73997_length_213_cov_1.550562_g66056_i0reverse_frame_3 - 2 8.8 7.8 0.58 10.5 1.3 2.4 2 0 0 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain Arena_glycoprot PF00798.18 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_2 - 0.024 13.3 0.5 0.025 13.3 0.5 1.0 1 0 0 1 1 1 0 Arenavirus glycoprotein Transpos_assoc PF13963.6 NODE_73995_length_213_cov_1.556180_g66054_i0reverse_frame_2 - 0.061 13.7 0.2 0.073 13.4 0.2 1.2 1 0 0 1 1 1 0 Transposase-associated domain DUF5547 PF17701.1 NODE_73993_length_213_cov_1.561798_g66052_i0reverse_frame_2 - 0.1 12.5 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5547) Frizzled PF01534.17 NODE_73993_length_213_cov_1.561798_g66052_i0forward_frame_3 - 0.016 14.3 2.8 0.016 14.3 2.8 1.0 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region p450 PF00067.22 NODE_73990_length_213_cov_1.561798_g66049_i0reverse_frame_3 - 1.7e-05 23.8 0.0 1.7e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 KRTDAP PF15200.6 NODE_73990_length_213_cov_1.561798_g66049_i0forward_frame_2 - 0.0057 16.4 1.9 0.0069 16.1 1.9 1.2 1 0 0 1 1 1 1 Keratinocyte differentiation-associated Staphostatin_B PF09023.10 NODE_73989_length_213_cov_1.567416_g66048_i0reverse_frame_3 - 0.14 12.2 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Staphostatin B SCIFF PF13165.6 NODE_73988_length_213_cov_1.573034_g66047_i0reverse_frame_3 - 0.033 14.1 2.2 0.047 13.6 2.2 1.3 1 0 0 1 1 1 0 Six-cysteine peptide SCIFF DUF2614 PF11023.8 NODE_73988_length_213_cov_1.573034_g66047_i0reverse_frame_3 - 0.039 14.0 1.1 0.039 14.0 1.1 1.3 1 1 0 1 1 1 0 Zinc-ribbon containing domain Pertactin PF03212.14 NODE_73988_length_213_cov_1.573034_g66047_i0forward_frame_2 - 2e-13 50.4 0.7 2.5e-13 50.0 0.2 1.4 2 0 0 2 2 2 1 Pertactin DUF4140 PF13600.6 NODE_73987_length_213_cov_1.573034_g66046_i0forward_frame_3 - 0.1 13.0 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Aerolysin PF01117.20 NODE_73986_length_213_cov_1.573034_g66045_i0reverse_frame_3 - 0.017 14.4 0.7 0.017 14.4 0.7 1.0 1 0 0 1 1 1 0 Aerolysin toxin Ribosomal_L50 PF10501.9 NODE_73986_length_213_cov_1.573034_g66045_i0reverse_frame_3 - 0.033 14.3 1.3 0.04 14.1 0.5 1.4 1 1 1 2 2 2 0 Ribosomal subunit 39S Gram_pos_anchor PF00746.21 NODE_73985_length_213_cov_1.573034_g66044_i0reverse_frame_3 - 0.099 12.6 0.3 0.16 12.0 0.3 1.3 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Perm-CXXC PF15629.6 NODE_73976_length_213_cov_1.651685_g66035_i0reverse_frame_3 - 0.09 13.1 2.4 0.14 12.5 2.4 1.2 1 0 0 1 1 1 0 Permuted single zf-CXXC unit Adeno_E4 PF05385.11 NODE_73975_length_213_cov_1.662921_g66034_i0reverse_frame_3 - 0.1 12.7 0.6 0.12 12.5 0.6 1.1 1 0 0 1 1 1 0 Mastadenovirus early E4 13 kDa protein zinc_ribbon_5 PF13719.6 NODE_73972_length_213_cov_1.679775_g66031_i0reverse_frame_2 - 0.04 13.7 1.7 0.058 13.2 1.7 1.2 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_12 PF11331.8 NODE_73972_length_213_cov_1.679775_g66031_i0reverse_frame_2 - 0.082 12.7 3.0 0.24 11.2 1.2 2.0 2 0 0 2 2 2 0 Probable zinc-ribbon domain Rubredoxin_2 PF18073.1 NODE_73972_length_213_cov_1.679775_g66031_i0forward_frame_2 - 0.11 12.2 5.1 3.7 7.4 5.1 2.4 1 1 0 1 1 1 0 Rubredoxin metal binding domain PI3Ka PF00613.20 NODE_73971_length_213_cov_1.685393_g66030_i0reverse_frame_3 - 8.2e-10 38.4 0.3 8.2e-10 38.4 0.3 1.0 1 0 0 1 1 1 1 Phosphoinositide 3-kinase family, accessory domain (PIK domain) DUF4508 PF14969.6 NODE_73968_length_213_cov_1.713483_g66027_i0forward_frame_3 - 3.5 8.0 6.3 0.53 10.6 2.6 1.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4508) ASFV_J13L PF05568.11 NODE_73967_length_213_cov_1.719101_g66026_i0forward_frame_3 - 0.26 11.0 0.6 0.21 11.3 0.6 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein DUF2162 PF09930.9 NODE_73964_length_213_cov_1.730337_g66023_i0forward_frame_2 - 0.45 9.9 4.2 0.51 9.7 4.2 1.0 1 0 0 1 1 1 0 Predicted transporter (DUF2162) YlbE PF14003.6 NODE_73959_length_213_cov_1.775281_g66018_i0reverse_frame_2 - 6 7.4 8.0 17 5.9 2.4 2.1 1 1 1 2 2 2 0 YlbE-like protein S1FA PF04689.13 NODE_73959_length_213_cov_1.775281_g66018_i0forward_frame_2 - 0.21 11.8 0.9 0.26 11.5 0.1 1.5 1 1 1 2 2 2 0 DNA binding protein S1FA EAP30 PF04157.16 NODE_73958_length_213_cov_1.780899_g66017_i0forward_frame_3 - 1.3e-05 24.6 0.0 1.6e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 EAP30/Vps36 family DUF3788 PF12663.7 NODE_73958_length_213_cov_1.780899_g66017_i0forward_frame_3 - 0.027 14.4 0.4 0.034 14.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3788) Reprolysin PF01421.19 NODE_73957_length_213_cov_1.786517_g66016_i0reverse_frame_2 - 0.0057 16.6 2.1 0.0063 16.5 2.1 1.0 1 0 0 1 1 1 1 Reprolysin (M12B) family zinc metalloprotease NodZ PF05830.11 NODE_73954_length_213_cov_1.792135_g66013_i0forward_frame_3 - 0.029 13.2 0.0 0.035 12.9 0.0 1.0 1 0 0 1 1 1 0 Nodulation protein Z (NodZ) Alpha-E PF04168.12 NODE_73951_length_213_cov_1.797753_g66010_i0forward_frame_3 - 0.074 12.8 0.1 0.076 12.8 0.1 1.0 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. Glyco_transf_25 PF01755.17 NODE_73948_length_213_cov_1.814607_g66007_i0forward_frame_3 - 0.043 13.7 0.1 0.044 13.6 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 25 (LPS biosynthesis protein) LOH1CR12 PF10158.9 NODE_73947_length_213_cov_1.820225_g66006_i0forward_frame_3 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 1 0 1 1 1 0 Tumour suppressor protein RNA_pol_A_CTD PF03118.15 NODE_73945_length_213_cov_1.837079_g66004_i0reverse_frame_3 - 0.091 12.5 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain Ion_trans PF00520.31 NODE_73944_length_213_cov_1.837079_g66003_i0forward_frame_2 - 6.6e-06 25.5 4.4 7e-06 25.4 4.4 1.0 1 0 0 1 1 1 1 Ion transport protein DUF1828 PF08861.10 NODE_73941_length_213_cov_1.859551_g66000_i0forward_frame_2 - 0.11 12.8 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF1828 Nitrate_red_gam PF02665.14 NODE_73939_length_213_cov_1.893258_g65998_i0reverse_frame_3 - 0.071 12.6 0.0 0.071 12.6 0.0 1.1 1 0 0 1 1 1 0 Nitrate reductase gamma subunit SNARE PF05739.19 NODE_73939_length_213_cov_1.893258_g65998_i0forward_frame_3 - 0.071 13.1 0.7 0.099 12.7 0.7 1.3 1 0 0 1 1 1 0 SNARE domain PBECR3 PF18812.1 NODE_73936_length_213_cov_1.926966_g65995_i0reverse_frame_2 - 0.21 11.6 4.4 0.37 10.8 4.4 1.6 1 1 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 ADH_zinc_N PF00107.26 NODE_73935_length_213_cov_2.005618_g65994_i0forward_frame_3 - 0.085 12.8 0.0 0.092 12.7 0.0 1.1 1 0 0 1 1 1 0 Zinc-binding dehydrogenase ABC_membrane PF00664.23 NODE_73934_length_213_cov_2.016854_g65993_i0forward_frame_2 - 1.5e-07 31.4 0.0 1.7e-07 31.2 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF1611_N PF17396.2 NODE_73934_length_213_cov_2.016854_g65993_i0forward_frame_2 - 0.09 13.0 0.0 0.29 11.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_N) Rossmann-like domain Phospholamban PF04272.14 NODE_73933_length_213_cov_2.033708_g65992_i0reverse_frame_2 - 4.2 6.9 13.6 11 5.6 13.6 1.7 1 1 0 1 1 1 0 Phospholamban Far-17a_AIG1 PF04750.14 NODE_73928_length_213_cov_2.078652_g65987_i0forward_frame_3 - 0.038 13.3 0.1 0.04 13.2 0.1 1.1 1 0 0 1 1 1 0 FAR-17a/AIG1-like protein Adipogenin PF15202.6 NODE_73925_length_213_cov_2.134831_g65984_i0forward_frame_2 - 0.071 13.1 0.4 0.071 13.1 0.4 1.5 2 0 0 2 2 2 0 Adipogenin MMTV_SAg PF01054.17 NODE_73923_length_213_cov_2.151685_g65982_i0forward_frame_2 - 0.16 11.5 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 Mouse mammary tumour virus superantigen DUF4118 PF13493.6 NODE_73922_length_213_cov_2.157303_g65981_i0reverse_frame_3 - 0.14 11.9 0.0 0.16 11.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) CPSase_C PF18302.1 NODE_73918_length_213_cov_2.252809_g65977_i0forward_frame_2 - 0.035 14.4 0.2 0.15 12.5 0.2 2.1 1 0 0 1 1 1 0 Carbamoyl phosphate synthetase C-terminal domain CAAD PF14159.6 NODE_73916_length_213_cov_2.337079_g65975_i0reverse_frame_3 - 0.15 11.9 0.1 0.19 11.6 0.1 1.3 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DUF2322 PF10084.9 NODE_73915_length_213_cov_2.348315_g65974_i0reverse_frame_3 - 0.12 12.4 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2322) RNA_pol_Rpb1_R PF05001.13 NODE_73915_length_213_cov_2.348315_g65974_i0reverse_frame_2 - 0.44 11.0 6.4 4.1 7.9 0.1 2.6 2 1 0 2 2 2 0 RNA polymerase Rpb1 C-terminal repeat Kinesin PF00225.23 NODE_73914_length_213_cov_2.353933_g65973_i0reverse_frame_2 - 6.5e-20 71.3 1.2 6.9e-20 71.2 1.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain WD40 PF00400.32 NODE_73905_length_213_cov_2.528090_g65964_i0reverse_frame_2 - 0.00014 22.6 0.7 0.00029 21.6 0.3 1.7 2 0 0 2 2 2 1 WD domain, G-beta repeat Prot_inhib_II PF02428.15 NODE_73905_length_213_cov_2.528090_g65964_i0reverse_frame_2 - 0.015 15.7 0.1 0.17 12.4 0.0 2.1 2 0 0 2 2 2 0 Potato type II proteinase inhibitor family STELLO PF03385.17 NODE_73905_length_213_cov_2.528090_g65964_i0forward_frame_3 - 0.12 11.2 0.4 0.12 11.2 0.4 1.0 1 0 0 1 1 1 0 STELLO glycosyltransferases CBS PF00571.28 NODE_73904_length_213_cov_2.544944_g65963_i0forward_frame_2 - 0.0081 16.6 0.2 0.19 12.2 0.1 2.2 1 1 0 2 2 2 1 CBS domain SPATA19 PF15212.6 NODE_73902_length_213_cov_2.595506_g65961_i0forward_frame_2 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 19, mitochondrial Peptidase_M54 PF07998.11 NODE_73901_length_213_cov_2.623596_g65960_i0reverse_frame_2 - 0.15 12.0 0.5 0.15 12.0 0.5 1.0 1 0 0 1 1 1 0 Peptidase family M54 DOMON PF03351.17 NODE_73898_length_213_cov_2.674157_g65957_i0forward_frame_3 - 0.059 13.6 0.1 0.065 13.5 0.1 1.1 1 0 0 1 1 1 0 DOMON domain Cortexin PF11057.8 NODE_73897_length_213_cov_2.735955_g65956_i0reverse_frame_3 - 0.021 14.7 0.9 0.034 14.0 0.9 1.3 1 0 0 1 1 1 0 Cortexin of kidney Peptidase_U32 PF01136.19 NODE_73895_length_213_cov_2.758427_g65954_i0reverse_frame_3 - 2.3e-18 66.2 0.3 2.5e-18 66.1 0.3 1.0 1 0 0 1 1 1 1 Peptidase family U32 Imm30 PF15565.6 NODE_73894_length_213_cov_2.764045_g65953_i0reverse_frame_3 - 0.19 11.8 0.1 0.27 11.3 0.1 1.2 1 0 0 1 1 1 0 Immunity protein 30 IL12 PF03039.14 NODE_73892_length_213_cov_2.825843_g65951_i0reverse_frame_2 - 0.037 13.4 0.1 0.037 13.4 0.1 1.0 1 0 0 1 1 1 0 Interleukin-12 alpha subunit DUF1397 PF07165.11 NODE_73891_length_213_cov_2.831461_g65950_i0reverse_frame_2 - 0.012 15.1 0.2 0.013 14.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1397) GntR PF00392.21 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 1.1e-19 69.9 1.1 1.2e-19 69.7 1.1 1.1 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.0017 18.3 0.8 0.002 18.1 0.8 1.2 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.014 15.7 0.2 0.017 15.5 0.2 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_24 PF13412.6 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.018 14.6 0.7 0.08 12.5 0.2 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding RPA_C PF08784.11 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.032 14.9 0.0 0.036 14.7 0.0 1.1 1 0 0 1 1 1 0 Replication protein A C terminal RP-C PF03428.13 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.034 13.8 0.3 0.042 13.5 0.3 1.2 1 1 0 1 1 1 0 Replication protein C N-terminal domain TFIIE_alpha PF02002.17 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.037 13.9 0.1 0.05 13.5 0.1 1.4 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_CodY PF08222.11 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.045 13.3 0.1 0.088 12.4 0.0 1.6 2 0 0 2 2 2 0 CodY helix-turn-helix domain HTH_8 PF02954.19 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.046 13.5 0.2 0.087 12.6 0.2 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family HTH_10 PF04967.12 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.063 13.1 0.1 0.1 12.4 0.1 1.3 1 0 0 1 1 1 0 HTH DNA binding domain HTH_20 PF12840.7 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.07 13.2 1.3 0.14 12.2 1.2 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.6 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.082 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.085 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 HTH domain Mnd1 PF03962.15 NODE_73891_length_213_cov_2.831461_g65950_i0forward_frame_3 - 0.14 12.5 0.0 1.9 8.8 0.0 2.0 2 0 0 2 2 2 0 Mnd1 HTH domain DUF3483 PF11982.8 NODE_73887_length_213_cov_2.955056_g65946_i0reverse_frame_3 - 0.099 12.3 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3483) TSR PF18487.1 NODE_73886_length_213_cov_2.955056_g65945_i0reverse_frame_2 - 0.035 14.3 2.1 0.035 14.3 2.1 1.7 2 0 0 2 2 2 0 Thrombospondin type 1 repeat ORC3_N PF07034.11 NODE_73884_length_213_cov_3.022472_g65943_i0forward_frame_3 - 0.024 13.8 0.1 0.03 13.4 0.1 1.0 1 0 0 1 1 1 0 Origin recognition complex (ORC) subunit 3 N-terminus RT_RNaseH_2 PF17919.1 NODE_73884_length_213_cov_3.022472_g65943_i0forward_frame_2 - 0.0016 18.4 0.0 0.0025 17.8 0.0 1.3 1 1 0 1 1 1 1 RNase H-like domain found in reverse transcriptase RT_RNaseH PF17917.1 NODE_73884_length_213_cov_3.022472_g65943_i0forward_frame_2 - 0.018 15.3 0.0 0.022 15.1 0.0 1.2 1 1 0 1 1 1 0 RNase H-like domain found in reverse transcriptase Mo-nitro_C PF06967.11 NODE_73883_length_213_cov_3.089888_g65942_i0reverse_frame_2 - 0.2 11.6 2.2 4.2 7.4 0.1 2.0 1 1 1 2 2 2 0 Mo-dependent nitrogenase C-terminus UvsW PF11637.8 NODE_73881_length_213_cov_3.162921_g65940_i0forward_frame_3 - 0.19 11.9 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 ATP-dependant DNA helicase UvsW SP_C-Propep PF08999.10 NODE_73880_length_213_cov_3.185393_g65939_i0reverse_frame_3 - 0.045 13.5 2.8 0.05 13.4 2.8 1.1 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide zf-CCCH PF00642.24 NODE_73880_length_213_cov_3.185393_g65939_i0forward_frame_2 - 0.0075 16.2 1.2 0.014 15.3 1.2 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_73880_length_213_cov_3.185393_g65939_i0forward_frame_2 - 0.53 10.4 5.1 0.94 9.6 5.1 1.4 1 0 0 1 1 1 0 Zinc finger domain UCR_14kD PF02271.16 NODE_73878_length_213_cov_3.230337_g65937_i0reverse_frame_3 - 0.0095 15.9 0.0 0.011 15.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit WXG100 PF06013.12 NODE_73878_length_213_cov_3.230337_g65937_i0reverse_frame_3 - 0.017 15.3 0.7 0.02 15.1 0.7 1.2 1 0 0 1 1 1 0 Proteins of 100 residues with WXG DUF1752 PF08550.10 NODE_73876_length_213_cov_3.292135_g65935_i0forward_frame_2 - 0.13 12.2 0.5 0.27 11.1 0.7 1.6 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF1752) VID27 PF08553.10 NODE_73868_length_213_cov_3.679775_g65927_i0reverse_frame_2 - 5.3e-21 75.1 0.2 5.6e-21 75.0 0.2 1.0 1 0 0 1 1 1 1 VID27 C-terminal WD40-like domain WD40 PF00400.32 NODE_73868_length_213_cov_3.679775_g65927_i0reverse_frame_2 - 0.025 15.4 0.0 0.94 10.5 0.0 2.1 2 0 0 2 2 2 0 WD domain, G-beta repeat Haemagg_act PF05860.13 NODE_73868_length_213_cov_3.679775_g65927_i0reverse_frame_2 - 0.045 13.6 0.1 0.057 13.3 0.0 1.3 1 1 0 1 1 1 0 haemagglutination activity domain DUF2569 PF10754.9 NODE_73867_length_213_cov_3.724719_g65926_i0reverse_frame_2 - 1e-05 26.0 0.5 1.3e-05 25.7 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2569) PAAR_motif PF05488.13 NODE_73866_length_213_cov_3.775281_g65925_i0reverse_frame_3 - 0.048 13.8 0.0 0.063 13.5 0.0 1.2 1 0 0 1 1 1 0 PAAR motif DUF1514 PF07438.11 NODE_73865_length_213_cov_3.792135_g65924_i0reverse_frame_3 - 0.088 12.7 0.3 0.088 12.7 0.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1514) HMG_box PF00505.19 NODE_73865_length_213_cov_3.792135_g65924_i0forward_frame_2 - 0.0019 18.6 0.4 0.0032 17.8 0.1 1.6 2 0 0 2 2 2 1 HMG (high mobility group) box TAXi_C PF14541.6 NODE_73863_length_213_cov_4.151685_g65922_i0reverse_frame_2 - 0.066 13.0 0.2 0.072 12.9 0.2 1.0 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal AbfB PF05270.13 NODE_73862_length_213_cov_4.337079_g65921_i0reverse_frame_2 - 0.076 13.0 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 Alpha-L-arabinofuranosidase B (ABFB) domain DUF3450 PF11932.8 NODE_73859_length_213_cov_12.629213_g65918_i0reverse_frame_3 - 0.13 11.5 3.0 0.15 11.3 3.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Cnn_1N PF07989.11 NODE_73859_length_213_cov_12.629213_g65918_i0reverse_frame_3 - 0.23 11.6 5.8 0.75 10.0 2.6 2.0 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF5090 PF17009.5 NODE_73859_length_213_cov_12.629213_g65918_i0forward_frame_2 - 0.77 9.7 10.1 0.82 9.6 10.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Opiods_neuropep PF01160.18 NODE_73858_length_213_cov_13.191011_g65917_i0forward_frame_2 - 0.056 13.5 0.6 0.074 13.2 0.6 1.3 1 0 0 1 1 1 0 Vertebrate endogenous opioids neuropeptide Herpes_BBRF1 PF04793.12 NODE_73856_length_213_cov_16.556180_g65915_i0forward_frame_3 - 0.043 12.9 0.2 0.047 12.7 0.2 1.0 1 0 0 1 1 1 0 BRRF1-like protein Baculo_PEP_C PF04513.12 NODE_73855_length_213_cov_17.691011_g65914_i0reverse_frame_3 - 0.00072 19.6 0.7 0.00077 19.5 0.7 1.0 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus NADHdh-2_N PF12155.8 NODE_73855_length_213_cov_17.691011_g65914_i0forward_frame_3 - 0.12 12.8 5.7 0.14 12.6 5.7 1.2 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 N-terminal DUF3446 PF11928.8 NODE_73854_length_213_cov_17.949438_g65913_i0reverse_frame_3 - 0.055 13.8 17.0 0.061 13.6 17.0 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain DUF3328 PF11807.8 NODE_73854_length_213_cov_17.949438_g65913_i0forward_frame_3 - 0.1 12.3 0.2 0.11 12.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) DUF4576 PF15144.6 NODE_73854_length_213_cov_17.949438_g65913_i0forward_frame_3 - 0.84 9.5 2.2 1.4 8.9 2.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4576) NAM-associated PF14303.6 NODE_73854_length_213_cov_17.949438_g65913_i0forward_frame_2 - 5.4 7.7 9.8 5.8 7.6 9.8 1.0 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain Mucin PF01456.17 NODE_73854_length_213_cov_17.949438_g65913_i0forward_frame_2 - 9.1 6.3 42.1 10 6.1 42.1 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF5522 PF17653.1 NODE_73852_length_213_cov_21.140449_g65911_i0reverse_frame_3 - 0.067 13.2 0.0 0.086 12.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5522) IQ PF00612.27 NODE_73851_length_213_cov_23.471910_g65910_i0reverse_frame_2 - 2.8 8.0 9.0 0.31 10.9 0.8 3.0 3 0 0 3 3 3 0 IQ calmodulin-binding motif Kelch_6 PF13964.6 NODE_73849_length_213_cov_25.370787_g65908_i0forward_frame_3 - 1.5 9.3 16.1 5.1 7.5 5.0 2.9 1 1 1 2 2 2 0 Kelch motif DUF390 PF04094.14 NODE_73846_length_213_cov_27.786517_g65905_i0reverse_frame_3 - 0.045 12.0 1.9 0.049 11.9 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF390) Myosin_head PF00063.21 NODE_73846_length_213_cov_27.786517_g65905_i0reverse_frame_2 - 0.0022 16.3 0.0 0.0022 16.3 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) DUF4834 PF16118.5 NODE_73844_length_213_cov_31.331461_g65903_i0reverse_frame_3 - 0.49 11.4 4.9 0.53 11.3 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Vezatin PF12632.7 NODE_73837_length_213_cov_39.039326_g65896_i0forward_frame_3 - 0.0096 15.3 1.2 0.011 15.1 1.2 1.0 1 0 0 1 1 1 1 Mysoin-binding motif of peroxisomes Disintegrin PF00200.23 NODE_73837_length_213_cov_39.039326_g65896_i0forward_frame_2 - 0.02 15.7 0.9 0.023 15.5 0.9 1.1 1 0 0 1 1 1 0 Disintegrin DARPP-32 PF05395.12 NODE_73835_length_213_cov_39.887640_g65894_i0forward_frame_3 - 0.11 12.7 0.0 0.12 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 zf-RING_7 PF02591.15 NODE_73833_length_213_cov_44.095506_g65892_i0reverse_frame_3 - 0.14 12.4 0.1 0.47 10.7 0.1 1.8 2 0 0 2 2 2 0 C4-type zinc ribbon domain DUF1419 PF07215.11 NODE_73832_length_213_cov_44.258427_g65891_i0reverse_frame_2 - 0.042 13.9 0.1 0.05 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1419) DUF3671 PF12420.8 NODE_73829_length_213_cov_45.393258_g65888_i0reverse_frame_2 - 0.02 14.9 0.2 0.043 13.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function Polysacc_syn_2C PF08485.10 NODE_73829_length_213_cov_45.393258_g65888_i0forward_frame_2 - 0.017 14.8 0.0 0.026 14.2 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein C-terminal Phage_min_tail PF05939.13 NODE_73827_length_213_cov_47.382022_g65886_i0reverse_frame_2 - 0.33 11.3 2.7 0.3 11.5 2.7 1.2 1 1 0 1 1 1 0 Phage minor tail protein APC_rep PF18797.1 NODE_73825_length_213_cov_48.494382_g65884_i0reverse_frame_2 - 0.045 14.7 0.0 0.056 14.4 0.0 1.2 1 0 0 1 1 1 0 Adenomatous polyposis coli (APC) repeat BDV_M PF16520.5 NODE_73824_length_213_cov_48.634831_g65883_i0reverse_frame_3 - 0.09 13.2 0.0 0.093 13.1 0.0 1.1 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae DciA PF05258.12 NODE_73822_length_213_cov_50.837079_g65881_i0forward_frame_3 - 0.06 13.8 0.0 0.087 13.2 0.0 1.4 1 1 0 1 1 1 0 Dna[CI] antecedent, DciA F-box PF00646.33 NODE_73822_length_213_cov_50.837079_g65881_i0forward_frame_3 - 0.91 9.5 3.2 0.5 10.3 1.0 1.6 2 0 0 2 2 2 0 F-box domain Orthopox_A49R PF06489.11 NODE_73820_length_213_cov_52.477528_g65879_i0reverse_frame_3 - 0.024 14.9 0.2 0.025 14.8 0.2 1.0 1 0 0 1 1 1 0 Orthopoxvirus A49R protein Peptidase_C98 PF15499.6 NODE_73816_length_213_cov_54.938202_g65875_i0forward_frame_2 - 0.042 13.3 2.3 0.046 13.2 2.3 1.0 1 0 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase HAUS-augmin3 PF14932.6 NODE_73814_length_213_cov_57.112360_g65873_i0reverse_frame_2 - 0.21 11.1 0.2 0.21 11.1 0.2 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 RNA_pol_Rpb2_2 PF04561.14 NODE_73813_length_213_cov_60.932584_g65872_i0forward_frame_2 - 0.2 11.3 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 2 Ribosomal_S24e PF01282.19 NODE_73811_length_213_cov_63.168539_g65870_i0reverse_frame_2 - 2.6e-19 69.0 0.1 3.1e-19 68.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e DUF971 PF06155.12 NODE_73810_length_213_cov_66.589888_g65869_i0reverse_frame_2 - 0.003 18.1 0.3 0.0038 17.8 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF971) DUF202 PF02656.15 NODE_73810_length_213_cov_66.589888_g65869_i0reverse_frame_2 - 0.051 14.0 0.0 0.084 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF202) G6PD_C PF02781.16 NODE_73808_length_213_cov_68.539326_g65867_i0reverse_frame_3 - 7e-07 28.7 0.0 7.2e-07 28.7 0.0 1.0 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain SMC_Nse1 PF07574.13 NODE_73807_length_213_cov_70.179775_g65866_i0forward_frame_2 - 0.013 15.4 0.2 0.014 15.2 0.2 1.0 1 0 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex PurS PF02700.14 NODE_73807_length_213_cov_70.179775_g65866_i0forward_frame_2 - 0.038 14.2 0.2 0.051 13.8 0.2 1.4 1 1 0 1 1 1 0 Phosphoribosylformylglycinamidine (FGAM) synthase CARD_2 PF16739.5 NODE_73807_length_213_cov_70.179775_g65866_i0forward_frame_2 - 0.052 13.5 0.1 0.11 12.5 0.0 1.5 1 1 0 1 1 1 0 Caspase recruitment domain Babuvirus_MP PF07234.11 NODE_73806_length_213_cov_71.921348_g65865_i0reverse_frame_3 - 0.19 11.9 0.9 0.21 11.7 0.9 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein zf-H2C2_2 PF13465.6 NODE_73804_length_213_cov_81.252809_g65863_i0reverse_frame_3 - 7.2e-07 29.4 2.9 7.2e-07 29.4 2.9 2.2 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_73804_length_213_cov_81.252809_g65863_i0reverse_frame_3 - 4.5e-05 23.7 3.7 4.5e-05 23.7 3.7 1.8 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_73804_length_213_cov_81.252809_g65863_i0reverse_frame_3 - 0.0033 18.1 3.4 0.0033 18.1 3.4 2.2 2 0 0 2 2 2 1 C2H2-type zinc finger zf-met PF12874.7 NODE_73804_length_213_cov_81.252809_g65863_i0reverse_frame_3 - 0.0042 17.4 0.9 0.0042 17.4 0.9 1.9 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 NODE_73804_length_213_cov_81.252809_g65863_i0reverse_frame_3 - 0.0091 16.0 4.8 0.0091 16.0 4.8 2.1 2 0 0 2 2 2 1 C2H2-type zinc finger cEGF PF12662.7 NODE_73803_length_213_cov_84.797753_g65862_i0forward_frame_2 - 0.017 15.0 2.3 0.017 15.0 2.3 2.4 4 0 0 4 4 4 0 Complement Clr-like EGF-like DUF4326 PF14216.6 NODE_73800_length_213_cov_99.044944_g65859_i0reverse_frame_2 - 0.14 12.9 1.5 0.18 12.5 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4326) NB-LRR PF12061.8 NODE_73799_length_213_cov_151.893258_g65858_i0forward_frame_2 - 0.15 11.4 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Late blight resistance protein R1 PWWP PF00855.17 NODE_73790_length_213_cov_255.500000_g65849_i0forward_frame_3 - 0.079 13.4 0.0 0.079 13.4 0.0 1.1 1 0 0 1 1 1 0 PWWP domain FANCAA PF15146.6 NODE_73785_length_213_cov_4969.898876_g65844_i0forward_frame_3 - 0.043 12.9 0.6 0.048 12.7 0.6 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated OrfA PF17495.2 NODE_73782_length_213_cov_130408.735955_g65841_i0reverse_frame_3 - 0.074 13.2 0.1 0.084 13.0 0.1 1.1 1 0 0 1 1 1 0 Vpr-like OrfA Nodulin_late PF07127.11 NODE_73782_length_213_cov_130408.735955_g65841_i0forward_frame_2 - 0.061 13.7 0.1 0.088 13.2 0.1 1.2 1 0 0 1 1 1 0 Late nodulin protein DUF5606 PF18347.1 NODE_73781_length_213_cov_2722887.483146_g65840_i0reverse_frame_3 - 0.15 12.3 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5606) NB PF04159.13 ORF99441 - 0.0024 17.9 1.9 0.0026 17.8 1.9 1.1 1 0 0 1 1 1 1 NB glycoprotein CPSase_L_D2 PF02786.17 ORF9863 - 0.14 11.6 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain DNA_pol3_beta_3 PF02768.15 ORF9759 - 0.13 12.1 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III beta subunit, C-terminal domain BSD PF03909.17 ORF97168 - 0.16 12.0 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 BSD domain Hydrolase_like PF13242.6 ORF9685 - 0.0076 16.3 0.0 0.008 16.2 0.0 1.1 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 ORF9685 - 0.22 11.6 0.0 0.29 11.2 0.0 1.1 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF295 PF03478.18 ORF96010 - 0.035 13.7 1.0 0.068 12.8 1.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF295) Sulfotransfer_2 PF03567.14 ORF95856 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family Meleagrin PF08189.11 ORF95603 - 0.088 12.5 1.4 0.13 12.0 1.4 1.4 1 0 0 1 1 1 0 Meleagrin/Cygnin family FSAP_sig_propep PF03032.15 ORF95431 - 7.6 6.7 5.2 2.9 8.0 2.0 1.8 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide Methyltransf_28 PF02636.17 ORF95417 - 0.0008 19.1 0.5 0.00083 19.1 0.5 1.0 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Ribosomal_L31e PF01198.19 ORF95417 - 0.056 13.7 0.1 0.073 13.3 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L31e MNNL PF07657.13 ORF94257 - 0.077 13.0 8.2 0.1 12.7 8.2 1.2 1 0 0 1 1 1 0 N terminus of Notch ligand SHQ1 PF04925.15 ORF94257 - 0.13 11.9 0.3 0.13 11.9 0.3 1.0 1 0 0 1 1 1 0 SHQ1 protein C5-epim_C PF06662.13 ORF94196 - 0.12 11.8 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 D-glucuronyl C5-epimerase C-terminus SHNi-TPR PF10516.9 ORF94076 - 0.017 14.6 0.1 0.03 13.8 0.1 1.4 1 0 0 1 1 1 0 SHNi-TPR DUF5510 PF17629.2 ORF94076 - 0.065 13.2 0.2 0.084 12.8 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5510) COX15-CtaA PF02628.15 ORF935 - 8.1e-06 25.1 0.8 9.6e-06 24.9 0.8 1.1 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein Adeno_E3_14_5 PF04834.12 ORF93448 - 0.019 15.5 1.0 0.026 15.1 1.0 1.2 1 0 0 1 1 1 0 Early E3 14.5 kDa protein Ad_cyc_g-alpha PF08509.11 ORF9332 - 0.21 11.3 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 Adenylate cyclase G-alpha binding domain DUF3918 PF13056.6 ORF93151 - 0.11 12.1 1.4 0.23 11.1 1.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3918) HEPN_AbiA_CTD PF18732.1 ORF93087 - 0.04 13.9 0.0 0.044 13.7 0.0 1.1 1 0 0 1 1 1 0 HEPN like, Abia C-terminal domain Afaf PF15339.6 ORF92602 - 0.14 11.8 2.0 0.093 12.4 0.9 1.2 1 1 0 1 1 1 0 Acrosome formation-associated factor VP_N-CPKC PF11475.8 ORF91291 - 0.028 14.3 0.1 0.044 13.7 0.1 1.3 1 0 0 1 1 1 0 Virion protein N terminal domain PXT1 PF15214.6 ORF90276 - 0.057 13.8 0.5 0.087 13.2 0.5 1.3 1 0 0 1 1 1 0 Peroxisomal testis-specific protein 1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks388.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks388.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks388.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks388.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:37:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GAGA PF09237.11 ORF8742 - 6.6 6.6 7.1 15 5.5 1.1 2.5 1 1 2 3 3 3 0 GAGA factor CAP59_mtransfer PF11735.8 ORF87323 - 0.038 13.7 0.0 0.039 13.6 0.0 1.1 1 0 0 1 1 1 0 Cryptococcal mannosyltransferase 1 SAM35 PF10806.8 ORF86683 - 0.076 13.3 0.1 0.077 13.3 0.1 1.1 1 0 0 1 1 1 0 SAM35, subunit of SAM coomplex ACTH_domain PF00976.18 ORF86250 - 0.34 10.9 0.2 0.34 10.9 0.2 1.8 3 0 0 3 3 3 0 Corticotropin ACTH domain Transposase_23 PF03017.14 ORF86058 - 0.13 12.2 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 TNP1/EN/SPM transposase DUF4491 PF14898.6 ORF85241 - 0.00034 21.0 5.2 0.0004 20.8 5.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4491) XhlA PF10779.9 ORF85241 - 2.2 8.6 3.6 2.8 8.2 3.6 1.2 1 0 0 1 1 1 0 Haemolysin XhlA DUF1700 PF08006.11 ORF85119 - 1.6 8.2 9.1 1.7 8.1 9.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) UPF0731 PF14982.6 ORF84658 - 0.0057 16.8 0.2 0.0071 16.5 0.2 1.2 1 1 0 1 1 1 1 UPF0731 family HTH_Tnp_1 PF01527.20 ORF84658 - 0.05 13.9 0.1 0.063 13.6 0.1 1.2 1 0 0 1 1 1 0 Transposase Como_LCP PF02247.16 ORF84484 - 0.054 12.1 0.1 0.062 11.9 0.1 1.0 1 0 0 1 1 1 0 Large coat protein DUF805 PF05656.14 ORF83657 - 4.7 7.7 9.8 0.46 10.9 4.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF805) Nairovirus_M PF07948.11 ORF83657 - 6.3 4.9 8.6 6.9 4.7 8.6 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like PEGSRP PF07623.11 ORF83495 - 0.084 12.7 1.4 0.084 12.7 1.4 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DUF2644 PF10841.8 ORF83103 - 0.073 13.3 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) WBP-1 PF11669.8 ORF81968 - 0.41 11.3 1.7 0.48 11.1 1.7 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 DUF1700 PF08006.11 ORF81968 - 0.66 9.5 8.6 0.64 9.5 8.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Tmemb_9 PF05434.11 ORF81968 - 0.8 9.6 6.9 0.94 9.4 6.9 1.2 1 0 0 1 1 1 0 TMEM9 zf-LITAF-like PF10601.9 ORF81853 - 0.034 14.4 2.4 0.041 14.1 2.4 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain YfzA PF14118.6 ORF81666 - 0.069 13.6 0.1 0.069 13.6 0.1 1.2 1 0 0 1 1 1 0 YfzA-like protein Orf78 PF06024.12 ORF81646 - 0.17 12.2 2.4 0.2 11.9 2.4 1.2 1 0 0 1 1 1 0 Orf78 (ac78) HTH_32 PF13565.6 ORF81398 - 0.028 15.1 0.3 0.032 14.9 0.3 1.2 1 0 0 1 1 1 0 Homeodomain-like domain SGL PF08450.12 ORF80713 - 0.092 12.3 0.0 0.097 12.2 0.0 1.0 1 0 0 1 1 1 0 SMP-30/Gluconolactonase/LRE-like region MORN PF02493.20 ORF80365 - 2.1e-09 36.7 8.7 5.3e-06 26.0 0.4 3.0 3 0 0 3 3 3 2 MORN repeat DUF2784 PF10861.8 ORF80001 - 0.22 11.6 0.1 0.23 11.5 0.1 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF2784) Ribosomal_S28e PF01200.18 ORF79160 - 1.6e-32 111.3 1.2 1.8e-32 111.1 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e MIG-14_Wnt-bd PF06664.12 ORF78927 - 0.13 11.5 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion DUF3927 PF13064.6 ORF7866 - 0.01 15.8 0.7 0.014 15.4 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) Polysacc_synt_C PF14667.6 ORF78404 - 0.11 12.6 10.6 0.12 12.4 10.6 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis C-terminal domain Tmemb_55A PF09788.9 ORF78404 - 0.35 9.9 3.0 0.38 9.8 3.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A Cytochrom_B_C PF00032.17 ORF78404 - 1.2 9.5 5.5 0.39 11.0 2.2 1.7 1 1 1 2 2 2 0 Cytochrome b(C-terminal)/b6/petD PspC PF04024.12 ORF78404 - 2.6 7.9 7.5 0.66 9.8 1.1 2.1 2 0 0 2 2 2 0 PspC domain UspA1_rep PF18792.1 ORF78384 - 2.7 8.7 4.6 6.7 7.5 0.1 2.6 3 0 0 3 3 3 0 Ubiquitous surface protein adhesin repeat NikR_C PF08753.11 ORF77974 - 0.12 12.5 0.2 0.16 12.1 0.2 1.1 1 0 0 1 1 1 0 NikR C terminal nickel binding domain DUF4726 PF15855.5 ORF77418 - 0.056 13.7 0.0 0.064 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) DUF4955 PF16315.5 ORF77418 - 0.084 13.1 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4955) SapA PF02199.15 ORF77216 - 0.095 13.0 3.1 0.18 12.1 3.1 1.6 1 0 0 1 1 1 0 Saposin A-type domain BRCT_3 PF18428.1 ORF76331 - 0.066 13.3 0.3 0.066 13.3 0.3 1.2 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain CytB6-F_Fe-S PF08802.10 ORF7626 - 0.43 10.6 3.6 2.7 8.1 0.3 2.1 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit Epiglycanin_TR PF05647.11 ORF75591 - 0.036 14.0 7.9 0.058 13.3 7.9 1.4 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like TMEM141 PF15110.6 ORF75486 - 0.082 13.5 0.2 0.098 13.2 0.2 1.2 1 0 0 1 1 1 0 TMEM141 protein family DUF3795 PF12675.7 ORF75207 - 0.032 14.6 3.4 0.039 14.4 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3795) Fer2 PF00111.27 ORF75020 - 0.079 12.9 1.6 0.11 12.5 1.6 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Histone_HNS PF00816.21 ORF74159 - 4.6e-15 56.2 1.8 5.2e-15 56.0 1.8 1.0 1 0 0 1 1 1 1 H-NS histone family Ribosomal_L38e PF01781.18 ORF73493 - 7.6e-35 118.8 3.9 8.2e-35 118.7 3.9 1.0 1 0 0 1 1 1 1 Ribosomal L38e protein family Dpy-30 PF05186.13 ORF72861 - 4.4e-19 67.9 0.0 5.3e-19 67.6 0.0 1.1 1 0 0 1 1 1 1 Dpy-30 motif RIIa PF02197.17 ORF72861 - 0.034 13.8 0.0 0.052 13.2 0.0 1.4 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit Vir_act_alpha_C PF10400.9 ORF72360 - 0.1 13.3 2.5 3.5 8.4 0.1 2.0 1 1 1 2 2 2 0 Virulence activator alpha C-term IncF PF17626.2 ORF71968 - 0.2 12.0 7.1 0.27 11.6 7.1 1.3 1 1 0 1 1 1 0 Inclusion membrane protein F Pex14_N PF04695.13 ORF71796 - 4.5 7.9 20.0 4.9 7.8 20.0 1.0 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Ank_4 PF13637.6 ORF71723 - 0.0063 17.1 0.2 0.0084 16.7 0.2 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Phage_tail_L PF05100.12 ORF7112 - 0.013 14.8 3.3 0.014 14.7 3.3 1.1 1 0 0 1 1 1 0 Phage minor tail protein L TMEM247 PF15444.6 ORF70300 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 NP1-WLL PF11733.8 ORF69838 - 0.27 11.0 2.6 0.27 11.0 2.6 1.0 1 0 0 1 1 1 0 Non-capsid protein NP1 PI_PP_C PF18365.1 ORF68943 - 0.042 13.8 0.0 0.047 13.7 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide phosphatase C-terminal domain CytB6-F_Fe-S PF08802.10 ORF68444 - 0.43 10.6 3.6 2.7 8.1 0.3 2.1 2 0 0 2 2 2 0 Cytochrome B6-F complex Fe-S subunit DUF4325 PF14213.6 ORF68159 - 0.097 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 STAS-like domain of unknown function (DUF4325) DUF3918 PF13056.6 ORF68053 - 0.11 12.1 1.4 0.23 11.1 1.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3918) NIF PF03031.18 ORF68021 - 8.6e-19 67.8 0.0 9.2e-19 67.7 0.0 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase LEDGF PF11467.8 ORF67486 - 0.032 13.8 0.1 0.032 13.8 0.1 1.2 1 0 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) DUF257 PF03192.13 ORF67486 - 0.052 13.4 0.2 0.054 13.3 0.2 1.0 1 0 0 1 1 1 0 Pyrococcus protein of unknown function, DUF257 DUF1505 PF07403.11 ORF67231 - 0.085 13.0 1.4 0.097 12.9 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) DUF4995 PF16386.5 ORF67231 - 0.099 12.6 0.3 0.12 12.4 0.3 1.3 1 1 0 1 1 1 0 Domain of unknown function ABC2_membrane PF01061.24 ORF67107 - 0.038 13.4 2.9 0.05 13.0 2.7 1.3 1 1 0 1 1 1 0 ABC-2 type transporter PI3_PI4_kinase PF00454.27 ORF66301 - 1.6e-05 24.9 0.0 1.6e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase BCMA-Tall_bind PF09257.10 ORF66168 - 2.3 8.4 6.7 0.22 11.6 1.7 1.8 2 0 0 2 2 2 0 BCMA, TALL-1 binding DUF1430 PF07242.11 ORF64950 - 0.036 14.3 2.5 0.041 14.1 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) DUF5426 PF17473.2 ORF64950 - 0.11 12.8 3.8 0.13 12.6 3.4 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5426) Tombus_P19 PF03220.13 ORF64810 - 0.0038 16.9 0.0 0.0045 16.7 0.0 1.1 1 0 0 1 1 1 1 Tombusvirus P19 core protein Porphyrn_cat_1 PF18206.1 ORF64649 - 0.13 12.9 1.4 0.17 12.5 1.4 1.2 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 DUF1188 PF06690.11 ORF64649 - 0.14 11.7 3.2 0.15 11.6 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) DUF3945 PF13101.6 ORF64220 - 0.024 14.3 0.1 0.035 13.8 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3945) Glyco_transf_7N PF13733.6 ORF64196 - 0.029 14.0 0.1 0.038 13.6 0.1 1.1 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 Phospholamban PF04272.14 ORF63320 - 1.3 8.6 4.9 2.7 7.5 4.9 1.6 1 1 0 1 1 1 0 Phospholamban DUF4666 PF15697.5 ORF62837 - 0.15 12.8 4.2 0.74 10.5 0.5 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4666) Peptidase_A22B PF04258.13 ORF62523 - 0.12 11.9 3.7 0.13 11.7 3.7 1.2 1 0 0 1 1 1 0 Signal peptide peptidase F-box PF00646.33 ORF62390 - 0.016 15.1 0.7 0.023 14.6 0.7 1.3 1 0 0 1 1 1 0 F-box domain Dickkopf_N PF04706.12 ORF62390 - 0.048 14.1 0.7 0.064 13.7 0.7 1.1 1 0 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region DUF3222 PF11519.8 ORF62226 - 0.081 13.2 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3222) Vir_act_alpha_C PF10400.9 ORF61821 - 0.1 13.3 2.5 3.5 8.4 0.1 2.0 1 1 1 2 2 2 0 Virulence activator alpha C-term TNRC6-PABC_bdg PF16608.5 ORF61737 - 0.00062 19.6 0.3 0.00067 19.5 0.3 1.0 1 0 0 1 1 1 1 TNRC6-PABC binding domain RcpB PF16971.5 ORF61719 - 0.11 12.3 1.0 0.12 12.3 1.0 1.0 1 0 0 1 1 1 0 Rough colony protein B, tight adherence - tad - subunit Styelin PF17562.2 ORF61719 - 0.13 12.7 0.8 0.19 12.1 0.8 1.4 1 0 0 1 1 1 0 Styelin DUF4381 PF14316.6 ORF61575 - 0.047 13.9 0.3 0.051 13.8 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) TetR_C_29 PF17938.1 ORF61275 - 0.13 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF3222 PF11519.8 ORF61182 - 0.081 13.2 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3222) Herpes_LMP1 PF05297.11 ORF61059 - 0.02 14.1 2.2 0.02 14.1 2.2 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) PHO4 PF01384.20 ORF61059 - 0.13 11.3 0.6 0.13 11.3 0.6 1.1 1 0 0 1 1 1 0 Phosphate transporter family Peptidase_U4 PF03419.13 ORF61059 - 0.64 9.3 4.8 0.65 9.2 4.8 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA HEPN_AbiA_CTD PF18732.1 ORF60475 - 0.042 13.8 0.0 0.048 13.6 0.0 1.0 1 0 0 1 1 1 0 HEPN like, Abia C-terminal domain DXP_reductoisom PF02670.16 ORF60475 - 0.11 13.3 0.0 0.12 13.1 0.0 1.0 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase zf-DNL PF05180.12 ORF60431 - 0.072 13.0 0.0 0.089 12.7 0.0 1.2 1 0 0 1 1 1 0 DNL zinc finger bPH_2 PF03703.14 ORF59770 - 0.15 12.3 0.2 0.66 10.2 0.1 1.8 1 1 1 2 2 2 0 Bacterial PH domain FERM_F1 PF18379.1 ORF5965 - 0.024 14.6 0.4 0.03 14.3 0.4 1.2 1 0 0 1 1 1 0 FERM F1 ubiquitin-like domain Rep-A_N PF04057.12 ORF5956 - 0.028 14.5 0.0 0.032 14.2 0.0 1.1 1 0 0 1 1 1 0 Replication factor-A protein 1, N-terminal domain Kelch_1 PF01344.25 ORF58408 - 0.015 14.9 0.0 0.062 12.9 0.0 1.9 2 0 0 2 2 2 0 Kelch motif TraI_2_C PF07515.11 ORF58230 - 0.095 12.6 0.4 0.1 12.5 0.4 1.2 1 1 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term AsmA PF05170.14 ORF58132 - 0.2 10.5 0.1 0.21 10.3 0.1 1.0 1 0 0 1 1 1 0 AsmA family Caveolin PF01146.17 ORF58079 - 0.048 13.6 4.1 0.058 13.4 4.1 1.1 1 0 0 1 1 1 0 Caveolin Arteri_Gl PF00951.18 ORF57795 - 0.89 9.3 4.7 0.94 9.3 4.7 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein Ring_hydroxyl_B PF00866.18 ORF57553 - 0.17 11.9 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Ring hydroxylating beta subunit p31comet PF06581.12 ORF57257 - 0.06 12.5 0.4 0.067 12.3 0.4 1.0 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding DUF3404 PF11884.8 ORF5675 - 0.0025 17.1 0.2 0.0029 16.9 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3404) DUF4969 PF16339.5 ORF56749 - 0.12 12.8 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4969) Ac81 PF05820.11 ORF56680 - 6.7 6.2 13.8 8 6.0 13.8 1.2 1 0 0 1 1 1 0 Baculoviridae AC81 DUF373 PF04123.13 ORF56324 - 0.07 12.6 0.2 0.07 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) PsbJ PF01788.17 ORF56281 - 0.056 13.3 0.5 0.088 12.7 0.5 1.2 1 0 0 1 1 1 0 PsbJ DUF148 PF02520.17 ORF55876 - 0.00052 20.1 1.4 0.00082 19.5 1.4 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF148 bZIP_1 PF00170.21 ORF55876 - 0.0055 16.8 1.8 0.0068 16.5 1.8 1.2 1 0 0 1 1 1 1 bZIP transcription factor ZapD PF07072.11 ORF55876 - 0.035 13.9 0.2 0.036 13.8 0.2 1.1 1 0 0 1 1 1 0 Cell division protein BPD_transp_1 PF00528.22 ORF55704 - 1.3e-12 47.8 0.4 1.4e-12 47.8 0.4 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component zf-AN1 PF01428.16 ORF55614 - 0.014 15.6 2.2 0.021 15.0 2.2 1.2 1 0 0 1 1 1 0 AN1-like Zinc finger Pkinase PF00069.25 ORF55217 - 3.7e-09 36.3 0.0 3.8e-09 36.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF55217 - 3.1e-06 26.7 0.0 3.4e-06 26.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase NCD1 PF04904.13 ORF55217 - 0.026 14.5 0.0 0.034 14.1 0.0 1.2 1 0 0 1 1 1 0 NAB conserved region 1 (NCD1) Trp_dioxygenase PF03301.13 ORF54717 - 0.26 10.6 0.3 0.3 10.4 0.3 1.0 1 0 0 1 1 1 0 Tryptophan 2,3-dioxygenase DUF2007 PF09413.10 ORF54714 - 0.18 12.0 0.0 0.24 11.6 0.0 1.1 1 0 0 1 1 1 0 Putative prokaryotic signal transducing protein Leu_Phe_trans PF03588.14 ORF54487 - 0.11 12.0 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Leucyl/phenylalanyl-tRNA protein transferase TSR PF18487.1 ORF54198 - 0.024 14.8 0.1 0.024 14.8 0.1 2.1 2 0 0 2 2 2 0 Thrombospondin type 1 repeat PapD-like PF14874.6 ORF54198 - 0.23 11.6 0.8 0.29 11.3 0.8 1.3 1 1 0 1 1 1 0 Flagellar-associated PapD-like HTH_18 PF12833.7 ORF5417 - 9.7e-12 45.0 0.0 1.2e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF5417 - 0.00035 20.6 0.0 0.00071 19.6 0.0 1.6 1 1 1 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family V_ATPase_I PF01496.19 ORF5395 - 6.4 4.6 10.1 6.4 4.5 10.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RNA_pol_Rpc4 PF05132.14 ORF5395 - 7.6 7.0 7.6 8.5 6.8 7.6 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF913 PF06025.12 ORF5395 - 7.9 5.3 7.7 7.8 5.4 7.7 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF3467 PF11950.8 ORF53845 - 0.1 12.8 0.9 0.12 12.6 0.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3467) ACT PF01842.25 ORF52913 - 9e-09 35.0 0.0 1.3e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 ORF52913 - 0.0024 18.4 0.0 0.0032 18.0 0.0 1.3 1 1 0 1 1 1 1 ACT domain PI-TkoII_IV PF18714.1 ORF52913 - 0.013 15.0 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase II intein Domain IV ACT_6 PF13740.6 ORF52913 - 0.076 13.0 0.0 0.16 11.9 0.0 1.5 1 1 0 1 1 1 0 ACT domain DUF4041 PF13250.6 ORF52913 - 0.11 12.4 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4041) Ribosomal_L21e PF01157.18 ORF52913 - 0.18 11.7 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L21e IL8 PF00048.20 ORF5232 - 0.081 13.1 0.1 0.7 10.1 0.0 2.0 1 1 1 2 2 2 0 Small cytokines (intecrine/chemokine), interleukin-8 like DUF2870 PF11069.8 ORF52135 - 0.038 14.4 1.7 0.045 14.1 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2870) MGDG_synth PF06925.11 ORF52135 - 0.059 13.5 0.6 0.069 13.3 0.6 1.0 1 0 0 1 1 1 0 Monogalactosyldiacylglycerol (MGDG) synthase zf-nanos PF05741.13 ORF51944 - 0.54 10.5 3.3 0.46 10.8 0.5 2.0 1 1 1 2 2 2 0 Nanos RNA binding domain DUF2368 PF10166.9 ORF50904 - 0.0059 16.2 1.6 0.0068 16.0 1.6 1.1 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2368) DUF2721 PF11026.8 ORF50494 - 0.15 12.0 9.7 0.19 11.6 9.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) MORN PF02493.20 ORF50388 - 2.1e-09 36.7 8.7 5.3e-06 26.0 0.4 3.0 3 0 0 3 3 3 2 MORN repeat Herpes_UL37_2 PF07413.11 ORF49190 - 0.0084 15.4 0.2 0.009 15.3 0.2 1.1 1 0 0 1 1 1 1 Betaherpesvirus immediate-early glycoprotein UL37 Golgin_A5 PF09787.9 ORF48669 - 0.67 9.4 10.4 0.69 9.3 10.4 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 HydF_dimer PF18128.1 ORF48600 - 0.066 13.3 0.6 0.09 12.9 0.6 1.3 1 1 0 1 1 1 0 Hydrogen maturase F dimerization domain Phage_T4_Gp30_7 PF06919.11 ORF47015 - 0.035 14.3 0.0 0.036 14.2 0.0 1.1 1 0 0 1 1 1 0 Phage Gp30.7 protein BTP PF05232.12 ORF46960 - 1.9 8.6 15.9 1.1 9.4 2.6 2.2 1 1 1 2 2 2 0 Chlorhexidine efflux transporter vMSA PF00695.19 ORF46281 - 1.3 8.0 4.4 1.5 7.9 4.4 1.1 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus DUF983 PF06170.12 ORF45899 - 0.032 14.7 3.0 11 6.5 0.0 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF983) zf-RING_7 PF02591.15 ORF45899 - 0.075 13.2 5.8 6.6 7.0 0.2 3.0 3 0 0 3 3 3 0 C4-type zinc ribbon domain C1_1 PF00130.22 ORF45899 - 0.095 12.6 2.4 0.45 10.4 0.3 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2256 PF10013.9 ORF45899 - 0.34 11.1 10.5 1.1 9.4 0.3 3.0 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-trcl PF13451.6 ORF45899 - 0.5 10.3 10.6 10 6.1 0.4 3.1 1 1 2 3 3 3 0 Probable zinc-ribbon domain mono-CXXC PF15626.6 ORF45899 - 2.3 8.7 12.3 2 8.8 1.4 3.1 3 0 0 3 3 3 0 single CXXC unit Endothelin PF00322.17 ORF45715 - 0.19 11.4 5.4 0.44 10.2 5.4 1.6 1 1 0 1 1 1 0 Endothelin family Phospholip_A2_2 PF05826.12 ORF45155 - 0.0061 16.7 0.9 0.0069 16.6 0.9 1.1 1 0 0 1 1 1 1 Phospholipase A2 DUF5607 PF18355.1 ORF45019 - 0.11 12.9 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5607) Mobilization_B PF17511.2 ORF44941 - 0.08 13.3 0.0 0.085 13.2 0.0 1.0 1 0 0 1 1 1 0 Mobilization protein B RIX1 PF08167.12 ORF44760 - 0.12 12.1 0.0 0.14 11.9 0.0 1.0 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis YABBY PF04690.13 ORF44146 - 1 9.9 7.4 1.1 9.8 7.4 1.1 1 0 0 1 1 1 0 YABBY protein HMG_box PF00505.19 ORF44081 - 1.2e-09 38.4 2.6 1.7e-09 38.0 2.6 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF44081 - 4.5e-09 36.8 3.0 6.1e-09 36.4 3.0 1.2 1 0 0 1 1 1 1 HMG-box domain Stimulus_sens_1 PF13756.6 ORF44081 - 0.027 15.0 0.1 0.028 15.0 0.1 1.1 1 0 0 1 1 1 0 Stimulus-sensing domain HMG_box_5 PF14887.6 ORF44081 - 0.029 14.3 2.6 0.033 14.1 2.6 1.1 1 0 0 1 1 1 0 HMG (high mobility group) box 5 SRP_SPB PF02978.19 ORF44081 - 0.032 14.9 1.2 0.036 14.7 1.2 1.3 1 1 0 1 1 1 0 Signal peptide binding domain DUF2582 PF10771.9 ORF44081 - 0.046 13.9 0.2 0.067 13.3 0.2 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix domain (DUF2582) DUF4337 PF14235.6 ORF44081 - 0.35 11.0 1.6 0.31 11.1 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) PAN_3 PF08277.12 ORF44077 - 0.024 14.5 0.7 0.031 14.1 0.7 1.1 1 0 0 1 1 1 0 PAN-like domain TRAM_LAG1_CLN8 PF03798.16 ORF43698 - 0.39 10.4 6.9 0.44 10.3 6.9 1.1 1 0 0 1 1 1 0 TLC domain PTP_N PF12453.8 ORF43595 - 0.21 11.3 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase N terminal Methyltransf_13 PF08421.11 ORF43320 - 0.019 15.2 0.1 0.026 14.8 0.1 1.3 1 0 0 1 1 1 0 Putative zinc binding domain ERGIC_N PF13850.6 ORF43238 - 0.054 13.8 0.5 0.061 13.7 0.5 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF3649 PF12365.8 ORF42556 - 0.046 13.4 0.3 0.11 12.3 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3649) Transposase_23 PF03017.14 ORF42225 - 0.13 12.2 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 TNP1/EN/SPM transposase DUF4639 PF15479.6 ORF41808 - 0.031 13.3 1.0 0.036 13.0 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4639) PRIMA1 PF16101.5 ORF41771 - 0.03 14.4 4.8 0.033 14.2 4.8 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 ORF41771 - 0.052 13.0 5.1 0.054 13.0 5.1 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 ORF41771 - 0.29 11.2 2.3 0.29 11.2 2.3 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator Etmic-2 PF06670.11 ORF41307 - 0.76 8.6 2.5 0.88 8.4 2.5 1.0 1 0 0 1 1 1 0 Microneme protein Etmic-2 Sulfotransfer_2 PF03567.14 ORF41030 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family ELYS PF13934.6 ORF40542 - 0.11 12.4 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore complex assembly Rho_N PF07498.12 ORF40519 - 0.13 12.2 0.1 0.23 11.4 0.1 1.4 1 0 0 1 1 1 0 Rho termination factor, N-terminal domain Vps36-NZF-N PF16988.5 ORF40351 - 0.015 14.6 0.1 0.022 14.1 0.1 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Ripply PF14998.6 ORF40345 - 0.14 12.8 0.2 0.15 12.7 0.2 1.2 1 0 0 1 1 1 0 Transcription Regulator Vps4_C PF09336.10 ORF40227 - 0.036 14.1 0.0 0.049 13.6 0.0 1.4 1 1 0 1 1 1 0 Vps4 C terminal oligomerisation domain eIF-5_eIF-2B PF01873.17 ORF3996 - 0.2 11.5 0.0 0.25 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain found in IF2B/IF5 CSN7a_helixI PF18392.1 ORF39700 - 0.24 11.3 2.1 12 5.9 0.1 2.2 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain PEX11 PF05648.14 ORF39481 - 0.0002 20.9 1.2 0.00023 20.7 1.2 1.1 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) RhoGEF67_u1 PF16615.5 ORF3907 - 1 9.9 5.5 0.38 11.3 0.4 2.0 2 0 0 2 2 2 0 Unstructured region one on RhoGEF 6 and 7 Peptidase_M17_N PF02789.17 ORF38412 - 0.095 12.6 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Cytosol aminopeptidase family, N-terminal domain TrwC PF08751.11 ORF37760 - 0.073 12.6 0.3 0.081 12.4 0.3 1.0 1 0 0 1 1 1 0 TrwC relaxase DUF3136 PF11334.8 ORF37744 - 0.094 12.5 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) DUF3313 PF11769.8 ORF37521 - 0.17 11.7 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3313) G-gamma PF00631.22 ORF36731 - 0.016 15.2 0.3 0.022 14.8 0.3 1.2 1 0 0 1 1 1 0 GGL domain zf-C3HC4_3 PF13920.6 ORF35616 - 1.9e-06 27.6 9.6 2.2e-06 27.4 9.6 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF35616 - 0.0018 18.1 9.7 0.0024 17.7 9.7 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 RecR PF02132.15 ORF35616 - 0.21 11.2 11.3 2 8.0 5.9 2.7 2 1 0 2 2 2 0 RecR protein zf-RING_5 PF14634.6 ORF35616 - 0.34 10.9 11.9 3.3 7.7 11.3 2.1 1 1 1 2 2 2 0 zinc-RING finger domain VPS28 PF03997.12 ORF35236 - 0.079 12.6 0.0 0.083 12.6 0.0 1.1 1 0 0 1 1 1 0 VPS28 protein RcpB PF16971.5 ORF34760 - 0.11 12.3 1.0 0.12 12.3 1.0 1.0 1 0 0 1 1 1 0 Rough colony protein B, tight adherence - tad - subunit Styelin PF17562.2 ORF34760 - 0.13 12.7 0.8 0.19 12.1 0.8 1.4 1 0 0 1 1 1 0 Styelin DUF2007 PF09413.10 ORF34597 - 0.18 12.0 0.0 0.24 11.6 0.0 1.1 1 0 0 1 1 1 0 Putative prokaryotic signal transducing protein ExbD PF02472.16 ORF33964 - 9 6.5 6.5 0.86 9.8 2.0 1.7 1 1 1 2 2 2 0 Biopolymer transport protein ExbD/TolR PIG-P PF08510.12 ORF3380 - 2.1e-06 27.7 1.2 2.1e-06 27.7 1.2 1.6 2 0 0 2 2 2 1 PIG-P DUF1648 PF07853.11 ORF3380 - 0.076 12.7 2.0 0.11 12.1 2.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1648) MLANA PF14991.6 ORF3380 - 0.11 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein melan-A NapE PF06796.11 ORF3380 - 1 8.9 6.9 0.31 10.6 2.6 2.1 1 1 1 2 2 2 0 Periplasmic nitrate reductase protein NapE SH3_4 PF06347.13 ORF32806 - 0.13 12.1 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial SH3 domain InvH PF04741.12 ORF32673 - 0.025 14.5 0.1 0.029 14.3 0.1 1.1 1 0 0 1 1 1 0 InvH outer membrane lipoprotein S_100 PF01023.19 ORF32673 - 0.044 13.5 0.1 0.067 12.9 0.1 1.3 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain DUF2897 PF11446.8 ORF32673 - 0.08 12.8 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) DUF3333 PF11812.8 ORF32673 - 0.089 13.0 0.1 0.093 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) RdRP_1 PF00680.20 ORF31996 - 0.041 12.4 0.2 0.043 12.3 0.2 1.0 1 0 0 1 1 1 0 RNA dependent RNA polymerase Mss4 PF04421.13 ORF30447 - 0.012 15.7 0.0 0.014 15.6 0.0 1.0 1 0 0 1 1 1 0 Mss4 protein Securin PF04856.13 ORF3034 - 0.003 17.6 0.5 0.0033 17.5 0.5 1.0 1 0 0 1 1 1 1 Securin sister-chromatid separation inhibitor YhdB PF14148.6 ORF29867 - 0.099 12.8 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 YhdB-like protein Dynamitin PF04912.14 ORF28434 - 0.0095 15.3 2.5 0.01 15.2 2.5 1.0 1 0 0 1 1 1 1 Dynamitin OGFr_N PF04664.13 ORF28434 - 0.013 15.1 0.2 0.013 15.0 0.2 1.1 1 0 0 1 1 1 0 Opioid growth factor receptor (OGFr) conserved region YSIRK_signal PF04650.17 ORF2822 - 0.051 13.4 0.4 0.073 12.9 0.4 1.3 1 0 0 1 1 1 0 YSIRK type signal peptide Cadherin_C_2 PF16492.5 ORF26522 - 1.4 9.7 6.0 3.6 8.4 0.7 2.1 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal Hydrophob_seed PF14547.6 ORF25982 - 0.017 15.3 0.6 0.021 15.0 0.6 1.3 1 1 0 1 1 1 0 Hydrophobic seed protein Fe_hyd_SSU PF02256.17 ORF25471 - 0.0076 16.3 0.1 0.012 15.7 0.1 1.2 1 0 0 1 1 1 1 Iron hydrogenase small subunit YhdB PF14148.6 ORF252 - 0.099 12.8 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 YhdB-like protein DUF3270 PF11674.8 ORF24321 - 0.0049 17.0 0.4 0.0061 16.7 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) PalH PF08733.10 ORF2378 - 0.062 12.3 3.7 0.066 12.2 3.7 1.1 1 0 0 1 1 1 0 PalH/RIM21 Imm50 PF15594.6 ORF23123 - 0.13 12.4 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 50 Fim-adh_lectin PF09222.10 ORF23123 - 0.15 11.5 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Fimbrial adhesin F17-AG, lectin domain AAA_lid_4 PF17864.1 ORF21841 - 0.13 12.0 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 RuvB AAA lid domain DUF3768 PF12599.8 ORF19370 - 0.048 13.7 0.1 0.052 13.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3768) SSI PF00720.17 ORF19020 - 0.065 13.2 0.3 0.068 13.1 0.3 1.1 1 0 0 1 1 1 0 Subtilisin inhibitor-like Sulfotransfer_2 PF03567.14 ORF18806 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family DDE_5 PF13546.6 ORF18704 - 0.13 11.6 0.1 0.13 11.6 0.1 1.0 1 0 0 1 1 1 0 DDE superfamily endonuclease Cnl2_NKP2 PF09447.10 ORF18704 - 0.21 11.7 1.0 0.22 11.7 0.1 1.5 2 0 0 2 2 2 0 Cnl2/NKP2 family protein Strep_pep PF14404.6 ORF18120 - 0.0074 16.5 0.4 0.0098 16.1 0.4 1.2 1 0 0 1 1 1 1 Ribosomally synthesized peptide in Streptomyces species DUF5074 PF16819.5 ORF18120 - 0.028 14.5 2.5 0.23 11.5 0.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5074) NCOA_u2 PF16665.5 ORF18029 - 0.13 12.6 3.8 0.17 12.2 3.8 1.2 1 0 0 1 1 1 0 Unstructured region on nuclear receptor coactivator protein CRR7 PF12095.8 ORF17780 - 0.11 13.0 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 DUF1439 PF07273.12 ORF17733 - 0.039 13.8 0.1 0.042 13.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1439) DUF4186 PF13811.6 ORF17522 - 0.11 12.6 2.2 0.12 12.4 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) Ribosomal_L23 PF00276.20 ORF153010 - 3.2e-13 49.8 1.9 1.4e-12 47.8 1.9 1.8 1 1 0 1 1 1 1 Ribosomal protein L23 Sulfotransfer_2 PF03567.14 ORF152184 - 0.015 15.2 0.1 0.016 15.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family DUF2070 PF09843.9 ORF151948 - 1.1 7.4 5.5 1.2 7.3 5.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PTR2 PF00854.21 ORF151889 - 0.0054 15.6 1.3 0.0056 15.6 1.3 1.0 1 0 0 1 1 1 1 POT family Ytca PF17090.5 ORF151889 - 0.021 15.3 1.7 0.037 14.5 1.7 1.4 1 0 0 1 1 1 0 Uncharacterised protein family DUF3975 PF13126.6 ORF151889 - 0.057 13.9 0.5 0.057 13.9 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3975) Aldo_ket_red PF00248.21 ORF151501 - 9.2e-05 21.8 0.3 0.00014 21.2 0.3 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family DHODB_Fe-S_bind PF10418.9 ORF151207 - 0.15 11.9 1.8 0.33 10.8 1.8 1.7 1 1 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TetR_C_12 PF16914.5 ORF15115 - 0.079 13.1 0.0 0.097 12.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial transcriptional repressor C-terminal VSG_B PF13206.6 ORF150886 - 0.34 10.1 4.6 0.34 10.1 4.6 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain UvrD_C_2 PF13538.6 ORF150222 - 0.066 13.0 1.4 0.11 12.3 1.4 1.5 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain PalH PF08733.10 ORF149914 - 0.062 12.3 3.7 0.066 12.2 3.7 1.1 1 0 0 1 1 1 0 PalH/RIM21 Pox_A12 PF04651.13 ORF149193 - 0.13 12.3 2.5 0.14 12.2 2.5 1.0 1 0 0 1 1 1 0 Poxvirus A12 protein zf-like PF04071.12 ORF148208 - 0.0046 16.9 1.6 0.0053 16.6 1.6 1.1 1 0 0 1 1 1 1 Cysteine-rich small domain TMEM247 PF15444.6 ORF147872 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 HipN PF18253.1 ORF147797 - 0.017 14.8 0.0 0.027 14.2 0.0 1.3 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain Phage_X PF05155.15 ORF147471 - 0.17 12.4 0.0 0.26 11.7 0.0 1.3 1 0 0 1 1 1 0 Phage X family NYAP_C PF15452.6 ORF14742 - 0.14 12.0 1.1 0.15 11.9 1.1 1.0 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter p450 PF00067.22 ORF146884 - 4.7e-13 48.7 0.0 5e-13 48.6 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Lipocalin_3 PF12702.7 ORF146365 - 0.046 13.8 0.1 0.05 13.7 0.1 1.1 1 0 0 1 1 1 0 Lipocalin-like DUF3399 PF11879.8 ORF145879 - 0.28 11.5 1.1 0.3 11.4 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) Orthopox_F6 PF06601.12 ORF145650 - 0.061 13.5 0.0 0.09 12.9 0.0 1.3 1 0 0 1 1 1 0 Orthopoxvirus F6 protein FAM216B PF15107.6 ORF145525 - 0.11 12.4 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 FAM216B protein family FAM165 PF14981.6 ORF145067 - 5.2 6.9 7.1 0.54 10.1 0.3 2.3 1 1 1 2 2 2 0 FAM165 family SecD_SecF PF02355.16 ORF144350 - 0.026 13.9 0.1 0.029 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein export membrane protein DUF5360 PF17314.2 ORF142583 - 0.017 15.2 2.5 0.019 15.0 2.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5360) Diedel PF13164.6 ORF142044 - 0.015 15.7 3.9 0.035 14.6 3.9 1.5 1 1 1 2 2 2 0 Diedel Herpes_UL37_2 PF07413.11 ORF141436 - 0.0084 15.4 0.2 0.009 15.3 0.2 1.1 1 0 0 1 1 1 1 Betaherpesvirus immediate-early glycoprotein UL37 P22_AR_C PF10548.9 ORF141290 - 0.067 13.4 0.4 0.086 13.0 0.4 1.1 1 0 0 1 1 1 0 P22AR C-terminal domain WBP-1 PF11669.8 ORF140820 - 0.41 11.3 1.7 0.48 11.1 1.7 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 DUF1700 PF08006.11 ORF140820 - 0.66 9.5 8.6 0.64 9.5 8.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Tmemb_9 PF05434.11 ORF140820 - 0.8 9.6 6.9 0.94 9.4 6.9 1.2 1 0 0 1 1 1 0 TMEM9 Pkinase PF00069.25 ORF140694 - 3.7e-09 36.3 0.0 3.8e-09 36.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF140694 - 3.1e-06 26.7 0.0 3.4e-06 26.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase NCD1 PF04904.13 ORF140694 - 0.026 14.5 0.0 0.034 14.1 0.0 1.2 1 0 0 1 1 1 0 NAB conserved region 1 (NCD1) M3 PF09213.10 ORF140678 - 0.15 10.7 0.0 0.15 10.7 0.0 1.0 1 0 0 1 1 1 0 M3 DUF3709 PF12493.8 ORF140524 - 0.23 11.5 8.4 0.077 13.0 5.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3709) TPX2 PF06886.11 ORF140144 - 1.1 9.5 14.6 0.68 10.2 12.2 1.8 1 1 0 1 1 1 0 Targeting protein for Xklp2 (TPX2) RF-1 PF00472.20 ORF140144 - 1.3 9.0 10.1 1.4 8.9 10.1 1.1 1 0 0 1 1 1 0 RF-1 domain ATP-synt_E PF05680.12 ORF140144 - 2.3 8.6 9.9 2.6 8.4 9.9 1.2 1 0 0 1 1 1 0 ATP synthase E chain DUF4342 PF14242.6 ORF140144 - 6.8 6.8 5.8 9.3 6.3 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4342) InvH PF04741.12 ORF140127 - 0.025 14.5 0.1 0.029 14.3 0.1 1.1 1 0 0 1 1 1 0 InvH outer membrane lipoprotein S_100 PF01023.19 ORF140127 - 0.044 13.5 0.1 0.067 12.9 0.1 1.3 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain DUF2897 PF11446.8 ORF140127 - 0.08 12.8 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) DUF3333 PF11812.8 ORF140127 - 0.089 13.0 0.1 0.093 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) DUF3169 PF11368.8 ORF139833 - 0.0027 17.2 2.4 0.0038 16.8 2.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3169) Mit_KHE1 PF10173.9 ORF138917 - 1 9.4 3.3 1 9.4 3.3 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related RXT2_N PF08595.11 ORF138917 - 7.6 6.6 18.4 11 6.1 18.4 1.3 1 0 0 1 1 1 0 RXT2-like, N-terminal DUF3399 PF11879.8 ORF138532 - 0.28 11.5 1.1 0.3 11.4 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) ZF-HD_dimer PF04770.12 ORF136017 - 4 7.8 7.7 4.9 7.6 1.0 2.2 2 0 0 2 2 2 0 ZF-HD protein dimerisation region SfsA PF03749.13 ORF135423 - 1.8e-16 60.3 0.1 2e-16 60.1 0.1 1.0 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain Cobl PF09469.10 ORF135423 - 0.15 12.3 0.0 0.17 12.1 0.0 1.0 1 0 0 1 1 1 0 Cordon-bleu ubiquitin-like domain zf-RING_5 PF14634.6 ORF135236 - 6.8e-06 25.9 7.5 1.1e-05 25.3 7.5 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF135236 - 1.7e-05 25.0 6.9 2.3e-05 24.7 6.9 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF135236 - 4.6e-05 23.3 8.3 0.0002 21.3 7.8 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF135236 - 0.00012 21.8 5.2 0.0012 18.7 5.2 2.1 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF135236 - 0.0011 18.7 10.0 0.0045 16.8 10.0 1.8 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF135236 - 0.0056 16.5 6.0 0.0056 16.5 6.0 2.3 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 ORF135236 - 0.015 15.4 6.7 0.038 14.1 6.7 1.7 1 1 0 1 1 1 0 zinc RING finger of MSL2 Med27 PF11571.8 ORF135236 - 0.02 15.2 4.1 3 8.3 0.1 2.5 1 1 2 3 3 3 0 Mediator complex subunit 27 zf_UBZ PF18439.1 ORF135236 - 0.056 13.0 0.1 0.056 13.0 0.1 3.1 2 1 2 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-P11 PF03854.14 ORF135236 - 0.093 12.4 5.9 0.14 11.8 5.9 1.5 1 1 0 1 1 1 0 P-11 zinc finger zf-RING_4 PF14570.6 ORF135236 - 0.22 11.3 8.1 0.34 10.7 8.1 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DZR PF12773.7 ORF135236 - 0.28 11.3 7.2 0.91 9.6 7.2 1.9 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF135236 - 0.43 10.1 9.1 0.79 9.2 0.0 3.3 3 1 0 3 3 3 0 zinc-ribbon domain DUF1258 PF06869.12 ORF135236 - 0.93 8.9 5.7 0.96 8.9 3.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1258) zf-C3HC4_4 PF15227.6 ORF135236 - 0.94 9.7 10.2 9.5 6.5 10.0 2.4 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RRN7 PF11781.8 ORF135236 - 0.98 9.2 6.6 4.4 7.1 0.1 3.2 3 0 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Zn-ribbon_8 PF09723.10 ORF135236 - 5.4 7.2 9.1 3.3 7.9 4.2 2.3 1 1 0 2 2 2 0 Zinc ribbon domain Leptin PF02024.15 ORF134970 - 0.085 12.6 0.4 0.091 12.5 0.4 1.1 1 0 0 1 1 1 0 Leptin CreD PF06123.12 ORF134970 - 0.73 8.6 4.4 0.73 8.5 4.4 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD Pox_E8 PF03394.13 ORF134679 - 0.07 12.7 0.0 0.078 12.5 0.0 1.0 1 0 0 1 1 1 0 Poxvirus E8 protein EF-hand_1 PF00036.32 ORF134353 - 0.15 11.7 0.7 0.29 10.8 0.7 1.4 1 0 0 1 1 1 0 EF hand Ring_hydroxyl_B PF00866.18 ORF133835 - 0.17 11.9 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Ring hydroxylating beta subunit Fer2 PF00111.27 ORF133085 - 0.079 12.9 1.6 0.11 12.5 1.6 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain IL8 PF00048.20 ORF132930 - 0.081 13.1 0.1 0.7 10.1 0.0 2.0 1 1 1 2 2 2 0 Small cytokines (intecrine/chemokine), interleukin-8 like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks389.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks389.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks389.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks389.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DSPn PF14671.6 ORF102111 - 2.1e-47 161.1 0.7 4.2e-47 160.1 0.7 1.5 1 0 0 1 1 1 1 Dual specificity protein phosphatase, N-terminal half DSPc PF00782.20 ORF102111 - 1.1e-11 44.7 0.0 2.2e-10 40.5 0.0 2.4 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF102111 - 0.0015 18.2 0.0 0.003 17.1 0.0 1.5 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF102111 - 0.0021 18.2 0.0 0.0039 17.3 0.0 1.3 1 0 0 1 1 1 1 Inositol hexakisphosphate EamA PF00892.20 ORF89731 - 2.2e-09 37.6 50.7 1.8e-07 31.4 17.7 2.8 2 1 0 2 2 2 2 EamA-like transporter family LEAP-2 PF07359.11 ORF89731 - 0.07 13.0 0.2 0.16 11.8 0.2 1.6 1 0 0 1 1 1 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) Mg_trans_NIPA PF05653.14 ORF89731 - 0.091 11.9 26.4 0.029 13.5 10.3 3.1 1 1 0 2 2 2 0 Magnesium transporter NIPA CrgA PF06781.12 ORF89731 - 0.35 10.9 0.1 0.35 10.9 0.1 2.9 3 1 1 4 4 4 0 Cell division protein CrgA TEBP_beta PF07404.11 ORF89461 - 1.9e-11 44.0 12.6 2.8e-11 43.4 0.8 2.3 2 1 0 2 2 2 2 Telomere-binding protein beta subunit (TEBP beta) DUF1319 PF07028.11 ORF89461 - 0.023 14.9 0.1 0.023 14.9 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1319) RPN1_C PF18051.1 ORF78018 - 1.9e-26 91.8 0.1 3.5e-26 91.0 0.1 1.4 1 0 0 1 1 1 1 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal PC_rep PF01851.22 ORF78018 - 9.2e-08 32.2 13.8 3.8e-05 23.9 1.2 4.6 5 0 0 5 5 5 2 Proteasome/cyclosome repeat HEAT_2 PF13646.6 ORF78018 - 0.045 14.2 3.6 0.051 14.0 0.5 2.6 2 1 1 3 3 3 0 HEAT repeats UTP15_C PF09384.10 ORF78018 - 0.12 12.1 0.0 0.83 9.3 0.0 2.3 3 0 0 3 3 3 0 UTP15 C terminal Abhydro_lipase PF04083.16 ORF69273 - 4.6e-18 64.6 0.1 8.1e-18 63.8 0.1 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF69273 - 3.5e-13 49.8 0.1 5.9e-13 49.1 0.1 1.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold 60KD_IMP PF02096.20 ORF61810 - 2e-23 83.1 1.3 2.7e-23 82.7 1.3 1.2 1 0 0 1 1 1 1 60Kd inner membrane protein Peptidase_C1 PF00112.23 ORF52504 - 1.3e-55 188.8 4.6 2.2e-55 188.1 4.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF52504 - 3.7e-13 49.7 7.2 3.7e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) LSDAT_prok PF18171.1 ORF50128 - 3.6e-34 117.7 0.0 5.6e-34 117.1 0.0 1.3 1 0 0 1 1 1 1 SLOG in TRPM, prokaryote LSDAT_euk PF18139.1 ORF50128 - 2.2e-10 40.4 0.1 1.1e-08 34.9 0.0 2.2 1 1 1 2 2 2 2 SLOG in TRPM Vma12 PF11712.8 ORF48515 - 8.4 6.5 6.7 1.1 9.4 2.4 1.8 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Peptidase_C14 PF00656.22 ORF48162 - 9.8e-37 127.2 0.0 1.6e-36 126.5 0.0 1.3 1 1 0 1 1 1 1 Caspase domain DNA_topoisoIV PF00521.20 ORF48162 - 0.005 15.8 0.3 0.0067 15.4 0.3 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A Raptor_N PF14538.6 ORF48162 - 0.1 12.6 1.9 6.7 6.7 0.0 2.8 3 0 0 3 3 3 0 Raptor N-terminal CASPase like domain YtpI PF14007.6 ORF42593 - 0.055 13.6 1.5 0.17 12.0 1.5 1.8 1 0 0 1 1 1 0 YtpI-like protein TMEM72 PF16054.5 ORF42593 - 2.3 7.9 5.8 4.7 6.9 5.8 1.4 1 0 0 1 1 1 0 Transmembrane protein family 72 MFS_1 PF07690.16 ORF36123 - 3e-26 92.2 42.3 7.4e-16 58.0 18.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF36123 - 1.4e-08 34.1 31.6 3.7e-05 22.8 12.7 2.1 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 ORF36123 - 7.9 5.2 13.8 1.1 8.0 7.1 2.6 1 1 1 2 2 2 0 MFS_1 like family DUF2804 PF10974.8 ORF32466 - 1.5e-40 139.8 5.9 1.7e-40 139.5 5.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2804) SMC_N PF02463.19 ORF25810 - 2.2e-41 141.7 0.0 2.7e-41 141.4 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF25810 - 1.2e-09 38.4 0.0 1.3e-09 38.3 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 ORF25810 - 6.4e-08 33.3 0.8 2e-07 31.7 0.1 2.1 2 1 1 3 3 3 1 AAA domain AAA_21 PF13304.6 ORF25810 - 1.8e-06 28.0 0.0 4.6e-06 26.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_27 PF13514.6 ORF25810 - 1e-05 25.2 0.1 1.8e-05 24.5 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF25810 - 0.00072 19.2 0.0 0.003 17.2 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_tran PF00005.27 ORF25810 - 0.0044 17.5 0.0 0.029 14.9 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_13 PF13166.6 ORF25810 - 0.083 11.5 0.0 0.17 10.5 0.0 1.4 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF25810 - 0.089 13.2 2.9 0.34 11.3 0.0 2.5 2 1 0 2 2 2 0 AAA ATPase domain Amino_oxidase PF01593.24 ORF25212 - 7.2e-29 101.4 0.0 8.9e-29 101.1 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase p450 PF00067.22 ORF20807 - 4e-58 197.3 0.0 5.2e-58 196.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Asp PF00026.23 ORF17226 - 8.8e-37 127.2 4.5 1.1e-36 126.9 4.5 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF17226 - 1e-05 25.9 0.4 4.5e-05 23.8 0.1 2.0 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal Pkinase PF00069.25 ORF152964 - 1.3e-16 60.8 0.1 2.2e-16 60.0 0.1 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF152964 - 3.7e-08 32.6 1.1 5.1e-08 32.1 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF152964 - 1.2e-07 31.3 0.0 1.7e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF152964 - 4.6e-05 23.5 0.0 7.2e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family ODV-E18 PF10717.9 ORF152964 - 0.0063 16.4 1.0 0.015 15.2 1.0 1.5 1 0 0 1 1 1 1 Occlusion-derived virus envelope protein ODV-E18 SAM_2 PF07647.17 ORF149911 - 0.00012 22.2 0.0 0.00022 21.2 0.0 1.5 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) DUF4022 PF13214.6 ORF149911 - 0.56 10.5 4.4 0.27 11.5 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4022) Phage_holin_3_6 PF07332.11 ORF149911 - 1.1 9.4 5.2 2.8 8.0 5.2 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Aldedh PF00171.22 ORF146280 - 1.5e-56 191.8 0.0 1.8e-56 191.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family BTB PF00651.31 ORF146280 - 0.12 12.6 0.1 10 6.4 0.1 2.3 2 0 0 2 2 2 0 BTB/POZ domain MIP PF00230.20 ORF140070 - 5.4e-28 98.2 9.1 1.1e-27 97.3 8.9 1.6 1 1 0 1 1 1 1 Major intrinsic protein RIH_assoc PF08454.11 ORF133061 - 0.025 14.4 10.3 0.46 10.4 0.0 3.8 2 1 0 2 2 2 0 RyR and IP3R Homology associated Churchill PF06573.11 ORF133061 - 0.044 14.1 1.8 6.9 7.0 0.1 2.6 2 0 0 2 2 2 0 Churchill protein Vma12 PF11712.8 ORF117408 - 8.4 6.5 6.7 1.1 9.4 2.4 1.8 2 0 0 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase His_Phos_2 PF00328.22 ORF108614 - 1e-15 58.0 5.0 1.1e-13 51.3 2.3 3.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) Pkinase PF00069.25 ORF107343 - 1.3e-16 60.8 0.1 2.2e-16 60.0 0.1 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF107343 - 3.7e-08 32.6 1.1 5.1e-08 32.1 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF107343 - 1.2e-07 31.3 0.0 1.7e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF107343 - 4.6e-05 23.5 0.0 7.2e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family ODV-E18 PF10717.9 ORF107343 - 0.0063 16.4 1.0 0.015 15.2 1.0 1.5 1 0 0 1 1 1 1 Occlusion-derived virus envelope protein ODV-E18 Pepdidase_M14_N PF18027.1 ORF103136 - 3.5e-15 56.3 1.5 1.6e-14 54.1 1.5 2.0 1 1 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain Peptidase_M14 PF00246.24 ORF103136 - 8.3e-12 45.5 0.0 1.3e-11 44.9 0.0 1.3 1 0 0 1 1 1 1 Zinc carboxypeptidase SpoIIIAH PF12685.7 ORF94276 - 0.0047 16.8 4.1 0.0098 15.7 4.1 1.5 1 0 0 1 1 1 1 SpoIIIAH-like protein Chordopox_A13L PF05961.11 ORF94276 - 0.01 16.0 0.1 0.19 12.0 0.0 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein DUF4330 PF14221.6 ORF94276 - 0.011 15.9 0.0 0.039 14.2 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) Enterotoxin_HS1 PF08090.11 ORF94276 - 0.048 13.6 0.1 0.095 12.7 0.1 1.4 1 0 0 1 1 1 0 Heat stable E.coli enterotoxin 1 SKG6 PF08693.10 ORF94276 - 0.26 10.7 3.4 0.56 9.7 3.4 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain EamA PF00892.20 ORF91017 - 8e-14 52.0 46.8 6.9e-10 39.2 17.3 2.5 2 1 0 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 ORF91017 - 0.0088 15.2 7.9 0.0088 15.2 7.9 3.2 2 1 0 4 4 4 2 Magnesium transporter NIPA Aldedh PF00171.22 ORF82791 - 3.8e-66 223.5 0.0 4.3e-66 223.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family EF-hand_6 PF13405.6 ORF71054 - 0.005 16.7 0.0 0.81 9.8 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF71054 - 0.072 13.5 0.3 1.2 9.6 0.1 2.3 2 1 1 3 3 3 0 EF-hand domain pair DUF2206 PF09971.9 ORF71054 - 0.18 10.5 0.3 0.26 10.0 0.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) FHA PF00498.26 ORF64856 - 1.4e-07 31.8 0.5 3e-07 30.7 0.1 1.8 2 0 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 ORF64856 - 4.3e-07 30.2 0.0 1.1e-06 28.9 0.0 1.7 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain B2 PF11473.8 ORF63862 - 0.12 12.2 0.1 2 8.3 0.0 2.4 2 0 0 2 2 2 0 RNA binding protein B2 Aldedh PF00171.22 ORF63083 - 3.8e-66 223.5 0.0 4.3e-66 223.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family AAA_31 PF13614.6 ORF61277 - 7e-29 101.0 0.0 1.1e-28 100.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 ORF61277 - 3.3e-17 62.7 0.0 4.6e-17 62.3 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 ORF61277 - 4.9e-05 22.9 0.9 0.0035 16.8 0.0 2.7 3 0 0 3 3 3 1 NUBPL iron-transfer P-loop NTPase MerR PF00376.23 ORF61277 - 8.8e-05 22.2 0.0 0.0002 21.0 0.0 1.6 1 0 0 1 1 1 1 MerR family regulatory protein MipZ PF09140.11 ORF61277 - 0.00048 19.5 0.6 0.07 12.4 0.1 2.2 2 0 0 2 2 2 2 ATPase MipZ ArsA_ATPase PF02374.15 ORF61277 - 0.00062 19.1 0.6 0.077 12.2 0.1 2.2 2 0 0 2 2 2 2 Anion-transporting ATPase VirC1 PF07015.11 ORF61277 - 0.012 14.9 0.1 5.1 6.3 0.0 2.3 2 0 0 2 2 2 0 VirC1 protein HTH_31 PF13560.6 ORF61277 - 0.03 14.7 0.2 0.092 13.1 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_Cox PF10743.9 ORF61277 - 0.13 12.3 0.1 0.39 10.8 0.0 1.8 2 0 0 2 2 2 0 Regulatory phage protein cox CAP PF00188.26 ORF53658 - 1.1e-05 26.3 0.0 5e-05 24.1 0.0 2.1 2 0 0 2 2 2 1 Cysteine-rich secretory protein family CTNNBL PF08216.11 ORF53658 - 0.37 11.0 1.8 1.5 9.0 0.2 2.3 2 0 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear ABC1 PF03109.16 ORF53370 - 4.4e-28 97.8 0.0 9.2e-28 96.8 0.0 1.5 2 0 0 2 2 2 1 ABC1 family Pkinase PF00069.25 ORF53370 - 3.6e-06 26.5 0.0 3.3e-05 23.4 0.0 2.0 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF53370 - 4.9e-05 23.4 0.0 0.00016 21.7 0.0 1.9 1 1 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF53370 - 0.001 18.7 0.0 0.018 14.7 0.0 2.4 2 1 0 2 2 2 1 RIO1 family Ank_2 PF12796.7 ORF5033 - 1.1e-18 67.6 0.0 6.6e-06 26.6 0.0 3.6 3 1 0 3 3 3 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF5033 - 1.4e-12 47.4 1.0 0.1 13.1 0.0 5.8 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF5033 - 4.2e-12 46.1 3.6 0.0035 17.6 0.2 4.1 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF5033 - 3.8e-11 43.3 2.4 0.0012 19.4 0.1 5.5 3 2 3 6 6 6 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF5033 - 3.3e-10 39.3 0.4 0.074 13.6 0.0 5.9 6 0 0 6 6 6 3 Ankyrin repeat p450 PF00067.22 ORF41460 - 5.6e-58 196.8 0.0 7.3e-58 196.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 KASH_CCD PF14662.6 ORF41380 - 5.1e-07 29.7 9.9 5.1e-07 29.7 9.9 2.0 2 0 0 2 2 2 1 Coiled-coil region of CCDC155 or KASH Prefoldin_2 PF01920.20 ORF41380 - 0.97 9.4 9.6 8.8 6.3 0.2 3.7 3 0 0 3 3 3 0 Prefoldin subunit Abhydro_lipase PF04083.16 ORF41262 - 2.5e-16 59.0 0.0 5.6e-16 57.9 0.0 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF41262 - 2.5e-06 27.3 0.0 5.3e-06 26.3 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold MORN PF02493.20 ORF3576 - 6.3e-56 183.1 76.8 2.4e-07 30.2 1.2 10.3 10 0 0 10 10 10 10 MORN repeat TPR_2 PF07719.17 ORF2102 - 0.0011 18.9 6.6 0.18 12.0 0.2 4.6 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF2102 - 0.0033 17.2 2.7 0.51 10.3 0.1 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF2102 - 0.038 14.8 0.0 44 5.3 0.0 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF2102 - 0.052 13.8 3.9 6.8 7.2 0.1 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF2102 - 0.15 12.8 6.5 8.7 7.2 0.0 4.6 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF2102 - 0.22 11.6 0.5 1.1 9.4 0.0 2.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF2102 - 0.23 11.2 3.6 8.7 6.1 0.0 3.5 4 0 0 4 4 4 0 TPR repeat Ion_trans PF00520.31 ORF19146 - 2.1e-07 30.5 14.7 3.4e-07 29.7 14.7 1.3 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF19146 - 3.4e-07 30.1 5.4 3.4e-07 30.1 5.4 2.1 2 0 0 2 2 2 1 Ion channel SK_channel PF03530.14 ORF19146 - 1.5e-06 28.2 1.6 3.7e-06 26.9 1.6 1.7 1 0 0 1 1 1 1 Calcium-activated SK potassium channel Med9 PF07544.13 ORF19146 - 0.036 14.1 0.3 0.18 11.9 0.3 2.0 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Pox_A_type_inc PF04508.12 ORF19146 - 0.18 11.7 1.6 0.41 10.6 1.6 1.6 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat CAP PF00188.26 ORF18780 - 0.0001 23.1 0.0 0.00049 20.9 0.0 2.2 2 0 0 2 2 2 1 Cysteine-rich secretory protein family CTNNBL PF08216.11 ORF18780 - 0.29 11.3 1.8 1.5 9.0 0.2 2.5 2 0 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear UPF0542 PF15086.6 ORF16845 - 0.13 12.2 4.7 8.7 6.4 0.5 3.9 3 0 0 3 3 3 0 Uncharacterised protein family UPF0542 TRP PF06011.12 ORF16845 - 2.2 6.9 12.0 8.2 5.0 12.0 2.0 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel Chorismate_bind PF00425.18 ORF15951 - 2.9e-69 233.5 0.0 3.6e-69 233.2 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Tektin PF03148.14 ORF15951 - 0.078 11.7 0.0 0.15 10.8 0.0 1.4 1 0 0 1 1 1 0 Tektin family zf-RING_11 PF17123.5 ORF152211 - 7.6e-05 22.4 7.0 7.6e-05 22.4 7.0 3.2 3 0 0 3 3 3 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF152211 - 0.00033 20.9 17.2 0.00033 20.9 17.2 2.6 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF152211 - 0.00079 19.4 11.3 0.00079 19.4 11.3 2.0 2 0 0 2 2 2 1 RING-type zinc-finger HemY_N PF07219.13 ORF152211 - 0.002 18.3 0.0 0.0035 17.5 0.0 1.3 1 0 0 1 1 1 1 HemY protein N-terminus Cadherin_C_2 PF16492.5 ORF152211 - 0.019 15.7 0.2 0.019 15.7 0.2 2.1 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal Comm PF15957.5 ORF152211 - 0.063 13.6 0.0 0.14 12.5 0.0 1.6 1 0 0 1 1 1 0 Commissureless zf-UDP PF14569.6 ORF152211 - 0.76 9.9 8.6 2.1 8.5 8.6 1.7 1 0 0 1 1 1 0 Zinc-binding RING-finger zf-rbx1 PF12678.7 ORF152211 - 2.9 8.3 20.8 0.16 12.3 12.8 2.5 2 0 0 2 2 2 0 RING-H2 zinc finger domain FAD_binding_3 PF01494.19 ORF148044 - 6.7e-29 101.2 0.0 8.8e-29 100.8 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Lycopene_cycl PF05834.12 ORF148044 - 1.1e-05 24.7 6.0 0.00035 19.7 6.0 2.7 1 1 0 1 1 1 1 Lycopene cyclase protein SE PF08491.10 ORF148044 - 1.3e-05 24.4 0.0 2.9e-05 23.3 0.0 1.6 2 0 0 2 2 2 1 Squalene epoxidase Trp_halogenase PF04820.14 ORF148044 - 6.9e-05 21.9 1.8 0.027 13.3 0.0 2.7 2 1 0 2 2 2 2 Tryptophan halogenase Pyr_redox_2 PF07992.14 ORF148044 - 0.0001 21.7 0.5 0.0058 15.9 0.3 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF148044 - 0.00026 20.7 5.8 0.00051 19.7 5.2 2.0 1 1 1 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF148044 - 0.00038 20.6 1.1 0.001 19.2 1.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain F420_oxidored PF03807.17 ORF148044 - 0.0042 17.6 0.2 0.0075 16.8 0.2 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 ORF148044 - 0.0063 16.4 0.4 0.012 15.5 0.4 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_9 PF13454.6 ORF148044 - 0.0068 16.4 0.4 0.038 14.0 0.4 2.0 1 1 0 1 1 1 1 FAD-NAD(P)-binding Pyr_redox PF00070.27 ORF148044 - 0.011 16.3 0.9 0.029 14.9 0.9 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 ORF148044 - 0.018 14.7 0.2 0.029 14.0 0.2 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 ORF148044 - 0.025 14.2 0.5 0.038 13.6 0.5 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 ORF148044 - 0.031 14.5 0.0 0.063 13.5 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain FAD_binding_2 PF00890.24 ORF148044 - 0.043 12.9 0.6 0.077 12.1 0.6 1.4 1 0 0 1 1 1 0 FAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF148044 - 0.087 12.8 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GIDA PF01134.22 ORF148044 - 0.2 10.7 0.5 5 6.1 0.7 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A MgrB PF13998.6 ORF147494 - 0.051 13.5 1.0 6.8 6.7 0.0 2.5 2 0 0 2 2 2 0 MgrB protein Pkinase PF00069.25 ORF125705 - 8e-53 179.5 1.8 1.2e-52 178.9 1.8 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF125705 - 6.3e-28 97.8 0.1 1e-27 97.1 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Abhydrolase_6 PF12697.7 ORF122351 - 7.9e-10 39.7 0.5 1.1e-09 39.3 0.5 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF122351 - 1.6e-07 31.7 0.0 2.6e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain Trypsin PF00089.26 ORF119995 - 3e-55 187.4 2.8 3.7e-55 187.1 2.8 1.1 1 0 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 ORF119995 - 5.9e-09 37.0 0.1 1.8e-08 35.4 0.1 1.8 1 1 0 1 1 1 1 Trypsin-like peptidase domain CUB PF00431.20 ORF119995 - 0.061 13.7 0.1 0.27 11.6 0.0 2.1 2 1 0 2 2 2 0 CUB domain adh_short PF00106.25 ORF116786 - 9.8e-21 74.1 0.1 4.8e-18 65.3 0.1 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF116786 - 5.7e-14 52.2 0.0 8.4e-14 51.7 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF116786 - 0.00069 19.6 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 KR domain MORN PF02493.20 ORF116475 - 6.3e-56 183.1 76.8 2.4e-07 30.2 1.2 10.3 10 0 0 10 10 10 10 MORN repeat Toxin_11 PF07473.11 ORF115910 - 4.3 7.5 6.8 1.2 9.2 1.5 2.8 2 0 0 2 2 2 0 Spasmodic peptide gm9a; conotoxin from Conus species Aldedh PF00171.22 ORF105863 - 3.8e-66 223.5 0.0 4.3e-66 223.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Trypsin PF00089.26 ORF104446 - 3e-55 187.4 2.8 3.7e-55 187.1 2.8 1.1 1 0 0 1 1 1 1 Trypsin Trypsin_2 PF13365.6 ORF104446 - 5.9e-09 37.0 0.1 1.8e-08 35.4 0.1 1.8 1 1 0 1 1 1 1 Trypsin-like peptidase domain CUB PF00431.20 ORF104446 - 0.061 13.7 0.1 0.27 11.6 0.0 2.1 2 1 0 2 2 2 0 CUB domain KH_1 PF00013.29 ORF102650 - 5.8e-14 51.7 0.0 6.5e-07 29.1 0.0 3.2 3 0 0 3 3 3 2 KH domain zf-ribbon_3 PF13248.6 ORF102650 - 4.3e-05 22.8 3.8 9.1e-05 21.7 3.8 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 ORF102650 - 0.00016 21.6 1.2 0.00035 20.5 1.2 1.5 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 ORF102650 - 0.0026 18.5 0.1 0.004 17.9 0.1 1.3 1 0 0 1 1 1 1 zinc-ribbon family zinc_ribbon_2 PF13240.6 ORF102650 - 0.0045 16.7 5.2 0.01 15.5 5.2 1.6 1 0 0 1 1 1 1 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 ORF102650 - 0.017 14.7 0.1 0.035 13.6 0.1 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding TerY_C PF15616.6 ORF102650 - 0.018 15.1 0.8 0.031 14.4 0.8 1.3 1 0 0 1 1 1 0 TerY-C metal binding domain KH_2 PF07650.17 ORF102650 - 0.031 14.1 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 KH domain HypA PF01155.19 ORF102650 - 0.042 13.9 0.1 0.098 12.7 0.1 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_4 PF13717.6 ORF102650 - 0.34 10.9 3.0 0.58 10.1 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Spc7 PF08317.11 ORF101862 - 0.0036 16.2 18.2 0.0036 16.2 18.2 2.9 1 1 2 3 3 3 1 Spc7 kinetochore protein GAS PF13851.6 ORF101862 - 0.0039 16.6 10.5 0.0039 16.6 10.5 4.4 2 1 2 4 4 4 1 Growth-arrest specific micro-tubule binding HMG_box PF00505.19 ORF101862 - 0.0096 16.3 0.1 0.075 13.5 0.1 2.6 1 0 0 1 1 1 1 HMG (high mobility group) box BST2 PF16716.5 ORF101862 - 0.024 15.2 10.0 0.024 15.2 10.0 5.1 2 2 3 6 6 6 0 Bone marrow stromal antigen 2 Hormone_1 PF00103.20 ORF101862 - 0.19 11.5 4.9 0.14 11.8 0.9 2.5 2 0 0 2 2 2 0 Somatotropin hormone family CbiX PF01903.17 ORF101862 - 0.45 10.9 5.5 3 8.2 0.0 3.4 3 0 0 3 3 3 0 CbiX Prominin PF05478.11 ORF101862 - 0.57 8.1 13.4 0.033 12.2 0.6 2.3 2 1 0 2 2 2 0 Prominin Filament PF00038.21 ORF101862 - 0.99 8.9 48.1 0.47 10.0 13.0 4.1 1 1 3 4 4 4 0 Intermediate filament protein Takusan PF04822.13 ORF101862 - 4.6 7.2 13.4 15 5.5 0.1 3.7 3 1 0 3 3 3 0 Takusan Patatin PF01734.22 NODE_14411_length_1171_cov_1105.427817_g10843_i0reverse_frame_3 - 3.4e-24 86.2 0.7 1.5e-23 84.0 0.2 2.1 2 1 0 2 2 2 1 Patatin-like phospholipase A_deaminase PF00962.22 ORF98825 - 3e-42 145.1 0.0 6.6e-41 140.7 0.0 2.0 1 1 0 1 1 1 1 Adenosine/AMP deaminase Abhydro_lipase PF04083.16 ORF97689 - 1.1e-18 66.6 0.0 1.8e-18 65.8 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF97689 - 1.4e-07 31.5 0.2 2.2e-07 30.8 0.2 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF2838 PF10998.8 ORF89007 - 4.2e-16 59.2 18.0 4.2e-16 59.2 18.0 3.1 2 1 1 3 3 3 1 Protein of unknown function (DUF2838) Peptidase_C1 PF00112.23 ORF79009 - 1.3e-55 188.8 4.6 2.1e-55 188.2 4.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF79009 - 3.6e-13 49.7 7.2 3.6e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) VWA_2 PF13519.6 ORF74801 - 3e-16 60.0 0.0 5.7e-16 59.1 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain Ssl1 PF04056.14 ORF74801 - 0.0013 18.5 0.0 0.0019 18.0 0.0 1.2 1 0 0 1 1 1 1 Ssl1-like HEAT PF02985.22 ORF64936 - 5.5e-26 88.4 5.5 0.00013 21.9 0.0 9.2 10 0 0 10 10 10 5 HEAT repeat HEAT_2 PF13646.6 ORF64936 - 8.7e-17 61.3 0.0 0.00013 22.3 0.0 5.6 1 1 5 6 6 6 6 HEAT repeats Vac14_Fab1_bd PF12755.7 ORF64936 - 9.9e-08 32.5 1.0 0.07 13.7 0.0 4.6 3 1 3 6 6 6 4 Vacuolar 14 Fab1-binding region HEAT_EZ PF13513.6 ORF64936 - 9.4e-07 29.2 0.0 0.019 15.5 0.0 3.2 2 0 0 2 2 2 2 HEAT-like repeat Cnd1 PF12717.7 ORF64936 - 8e-06 26.0 1.0 0.078 13.0 0.0 3.2 1 1 2 3 3 3 2 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.8 ORF64936 - 0.00029 20.5 0.5 0.021 14.4 0.1 3.0 1 1 2 4 4 4 1 CLASP N terminal Arm PF00514.23 ORF64936 - 0.0012 18.8 0.1 1 9.5 0.0 3.0 3 0 0 3 3 3 1 Armadillo/beta-catenin-like repeat RTP1_C1 PF10363.9 ORF64936 - 0.0094 16.1 0.1 0.66 10.2 0.1 3.2 2 1 1 3 3 3 1 Required for nuclear transport of RNA pol II C-terminus 1 NPA PF16469.5 ORF64936 - 0.014 16.0 0.2 0.035 14.7 0.0 1.8 2 0 0 2 2 1 0 Nematode polyprotein allergen ABA-1 RasGEF_N_2 PF14663.6 ORF64936 - 0.03 14.7 0.1 65 4.0 0.0 3.6 4 0 0 4 4 4 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain DUF5510 PF17629.2 ORF64936 - 0.097 12.6 0.4 14 5.7 0.1 2.9 2 0 0 2 2 2 0 Family of unknown function (DUF5510) DUF5625 PF18539.1 ORF64936 - 0.1 12.9 0.0 0.21 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5625) MHC_I_C PF06623.11 ORF64912 - 0.015 15.2 0.5 0.028 14.3 0.5 1.4 1 0 0 1 1 1 0 MHC_I C-terminus TauE PF01925.19 ORF61148 - 2.1e-15 57.0 17.2 2.2e-09 37.3 15.2 2.5 2 1 0 2 2 2 2 Sulfite exporter TauE/SafE Ank_2 PF12796.7 ORF60647 - 1.5e-46 156.9 3.3 7.7e-11 42.4 0.2 4.4 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank PF00023.30 ORF60647 - 9.8e-38 127.0 12.4 0.00039 20.7 0.0 8.3 8 0 0 8 8 8 7 Ankyrin repeat Ank_5 PF13857.6 ORF60647 - 3e-37 126.2 7.4 8.2e-07 29.2 0.0 7.3 1 1 7 8 8 8 7 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF60647 - 2.3e-31 107.8 8.4 4.3e-10 39.9 0.1 5.7 3 2 3 6 6 6 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF60647 - 3.4e-30 100.7 0.5 0.0017 18.7 0.0 8.9 8 1 1 9 9 9 7 Ankyrin repeat CCD PF07860.11 ORF60647 - 0.22 11.6 0.0 0.37 10.8 0.0 1.3 1 0 0 1 1 1 0 WisP family C-Terminal Region EccE PF11203.8 ORF60647 - 9.8 6.6 10.1 7.2 7.0 0.2 4.2 1 1 2 3 3 3 0 Putative type VII ESX secretion system translocon, EccE TRP PF06011.12 ORF58823 - 2.2e-09 36.6 4.0 2.9e-09 36.1 4.0 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Churchill PF06573.11 ORF53933 - 0.02 15.2 1.0 0.05 13.9 0.6 1.9 1 1 0 1 1 1 0 Churchill protein Abhydro_lipase PF04083.16 ORF5357 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF5357 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Amidohydro_3 PF07969.11 ORF52265 - 1.3e-11 44.6 0.2 1.4e-05 24.8 0.1 2.2 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 ORF52265 - 1.6e-09 37.6 0.1 6.7e-06 25.7 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family DUF3523 PF12037.8 ORF51212 - 0.53 9.6 2.0 0.37 10.1 0.4 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3523) eIF3_N PF09440.10 ORF4713 - 2.9e-14 53.7 10.2 2.9e-14 53.7 10.2 2.3 2 0 0 2 2 2 1 eIF3 subunit 6 N terminal domain TPR_19 PF14559.6 ORF4713 - 0.00054 20.4 0.0 0.0015 19.0 0.0 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat PCI PF01399.27 ORF4713 - 0.00056 20.4 1.6 0.00056 20.4 1.6 2.4 2 1 0 2 2 2 1 PCI domain SRP_TPR_like PF17004.5 ORF4713 - 0.0063 16.5 2.5 0.039 14.0 0.9 2.8 2 1 0 2 2 2 1 Putative TPR-like repeat ANAPC3 PF12895.7 ORF4713 - 0.0064 16.7 0.2 0.024 14.8 0.2 2.0 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF4713 - 0.025 15.4 0.0 0.13 13.2 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF4713 - 0.04 14.3 0.9 0.095 13.0 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat WPP PF13943.6 ORF4713 - 0.056 13.8 0.9 0.14 12.6 0.9 1.6 1 0 0 1 1 1 0 WPP domain TPR_17 PF13431.6 ORF4713 - 0.071 13.5 0.1 0.3 11.5 0.1 2.2 1 0 0 1 1 1 0 Tetratricopeptide repeat CSN8_PSD8_EIF3K PF10075.9 ORF4713 - 0.11 12.5 3.9 0.17 11.8 0.2 2.7 2 1 0 2 2 2 0 CSN8/PSMD8/EIF3K family FliD_N PF02465.18 ORF4713 - 0.65 10.7 6.7 0.38 11.5 3.3 2.4 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Spore_III_AB PF09548.10 ORF4713 - 2 8.5 11.2 2.4 8.2 0.2 3.2 3 0 0 3 3 3 0 Stage III sporulation protein AB (spore_III_AB) Cytochrom_NNT PF03264.14 ORF44218 - 2.5e-69 232.5 8.3 1.3e-68 230.1 6.0 2.1 2 0 0 2 2 2 1 NapC/NirT cytochrome c family, N-terminal region Cytochrome_C7 PF14522.6 ORF44218 - 6.3e-10 38.9 12.2 4.6e-05 23.3 3.6 3.6 3 0 0 3 3 3 3 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 ORF44218 - 5.2e-06 26.8 18.3 0.013 16.0 6.6 3.3 3 0 0 3 3 3 2 Cytochrome c3 Cytochrome_CBB3 PF13442.6 ORF44218 - 1.8e-05 25.0 14.0 0.17 12.3 0.0 5.4 3 1 2 5 5 5 2 Cytochrome C oxidase, cbb3-type, subunit III IRF-2BP1_2 PF11261.8 ORF44218 - 5.6e-05 22.6 0.8 0.00013 21.4 0.1 1.9 2 0 0 2 2 2 1 Interferon regulatory factor 2-binding protein zinc finger Paired_CXXCH_1 PF09699.10 ORF44218 - 0.00068 19.3 25.2 0.0042 16.8 5.1 4.5 3 2 2 5 5 5 2 Doubled CXXCH motif (Paired_CXXCH_1) DHC PF09626.10 ORF44218 - 0.0013 19.6 1.0 0.071 14.0 0.7 4.7 3 2 1 4 4 4 2 Dihaem cytochrome c Cytochrom_CIII PF02085.16 ORF44218 - 0.095 13.0 24.1 1 9.7 9.1 3.5 2 1 2 4 4 4 0 Class III cytochrome C family GF_recep_IV PF14843.6 ORF44218 - 0.29 10.9 8.5 0.47 10.2 1.2 3.1 3 0 0 3 3 3 0 Growth factor receptor domain IV Cytochrom_C1 PF02167.15 ORF44218 - 0.75 9.5 4.6 16 5.1 0.8 3.2 2 1 2 4 4 4 0 Cytochrome C1 family Cytochrom_C PF00034.21 ORF44218 - 3.6 8.8 18.2 2.6 9.3 0.5 4.2 2 1 1 3 3 3 0 Cytochrome c DUF3365 PF11845.8 ORF44218 - 4.9 7.5 0.0 4.9 7.5 0.0 4.5 2 1 1 4 4 4 0 Protein of unknown function (DUF3365) MHC_I_C PF06623.11 ORF42456 - 0.015 15.2 0.5 0.028 14.3 0.5 1.4 1 0 0 1 1 1 0 MHC_I C-terminus EF-hand_7 PF13499.6 ORF37431 - 2.8e-21 75.7 6.8 1.3e-10 41.6 1.7 2.6 2 0 0 2 2 2 2 EF-hand domain pair Pkinase PF00069.25 ORF37431 - 1.6e-20 73.6 0.0 2.6e-20 72.9 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain EF-hand_1 PF00036.32 ORF37431 - 2.3e-17 61.2 4.1 1.5e-05 24.1 0.2 4.4 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 ORF37431 - 1.7e-16 58.6 2.8 0.01 15.7 0.1 4.5 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF37431 - 1.5e-14 53.6 4.6 6.3e-10 38.8 0.2 3.3 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF37431 - 2.9e-08 32.9 2.3 0.00091 18.6 0.1 3.7 3 0 0 3 3 3 2 EF hand Pkinase_Tyr PF07714.17 ORF37431 - 1.1e-06 28.2 0.0 2.1e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_9 PF14658.6 ORF37431 - 5.8e-05 23.3 0.3 0.13 12.6 0.0 2.6 2 0 0 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF37431 - 0.047 14.0 1.2 2.5 8.5 0.5 2.3 1 1 2 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region Aminotran_1_2 PF00155.21 ORF37431 - 0.077 12.1 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class I and II Adenine_glyco PF03352.13 ORF37431 - 0.089 12.6 0.3 15 5.3 0.1 2.3 2 0 0 2 2 2 0 Methyladenine glycosylase EF-hand_4 PF12763.7 ORF37431 - 0.093 12.7 1.1 1.3 9.0 0.1 2.4 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF37431 - 0.21 11.5 1.4 2.8 7.9 0.1 2.5 2 0 0 2 2 2 0 EF hand A_deaminase PF00962.22 ORF35446 - 3e-42 145.1 0.0 6.6e-41 140.7 0.0 2.0 1 1 0 1 1 1 1 Adenosine/AMP deaminase Acetyltransf_16 PF05301.11 ORF3382 - 1.3e-18 67.4 0.9 2.2e-18 66.6 0.9 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Rep_fac-A_C PF08646.10 ORF3382 - 0.078 12.7 0.3 0.16 11.7 0.3 1.5 1 0 0 1 1 1 0 Replication factor-A C terminal domain Gp45_2 PF17470.2 ORF33485 - 0.028 14.4 0.8 2 8.5 0.1 2.6 2 0 0 2 2 2 0 Phage gene product 45.2 GreA_GreB_N PF03449.15 ORF33485 - 0.097 12.8 0.3 14 5.9 0.1 2.4 2 0 0 2 2 2 0 Transcription elongation factor, N-terminal Ketoacyl-synt_C PF02801.22 ORF28220 - 4.6e-29 100.8 0.0 6.4e-29 100.4 0.0 1.2 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 ORF28220 - 0.0046 17.4 0.1 0.0077 16.7 0.1 1.4 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension AMPK1_CBM PF16561.5 ORF28220 - 0.048 13.9 0.0 0.39 11.0 0.0 2.1 1 1 1 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase Porin_5 PF16930.5 ORF28220 - 0.082 11.4 0.1 0.12 10.8 0.1 1.1 1 0 0 1 1 1 0 Putative porin Abhydro_lipase PF04083.16 ORF19597 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF19597 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Choline_kinase PF01633.20 ORF18977 - 1.9e-25 89.8 7.0 2.7e-25 89.2 7.0 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 ORF18977 - 0.00033 20.7 0.0 0.00046 20.2 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family HAD_SAK_2 PF18143.1 ORF17063 - 2e-23 83.3 0.0 2e-23 83.3 0.0 2.3 2 1 0 2 2 2 1 HAD domain in Swiss Army Knife RNA repair proteins SOBP PF15279.6 ORF17063 - 0.29 11.7 4.7 0.38 11.3 4.7 1.2 1 0 0 1 1 1 0 Sine oculis-binding protein DUF4778 PF16008.5 ORF17063 - 0.84 9.6 11.7 1.2 9.2 11.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) DUF572 PF04502.13 ORF17063 - 3.9 7.0 32.8 5.6 6.5 32.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF572) V_ATPase_I PF01496.19 ORF17063 - 7.7 4.3 12.6 9.3 4.0 12.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CS PF04969.16 ORF15303 - 0.00064 20.7 0.0 0.0011 19.9 0.0 1.5 1 0 0 1 1 1 1 CS domain baeRF_family10 PF18854.1 ORF15303 - 2.1 8.6 8.2 0.11 12.7 1.3 2.0 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 10 A_deaminase PF00962.22 ORF14043 - 3e-42 145.1 0.0 6.6e-41 140.7 0.0 2.0 1 1 0 1 1 1 1 Adenosine/AMP deaminase DUF2838 PF10998.8 ORF140383 - 4.2e-16 59.2 18.0 4.2e-16 59.2 18.0 3.1 2 1 1 3 3 3 1 Protein of unknown function (DUF2838) DUF2838 PF10998.8 ORF138943 - 4.2e-16 59.2 18.0 4.2e-16 59.2 18.0 3.1 2 1 1 3 3 3 1 Protein of unknown function (DUF2838) DUF2838 PF10998.8 ORF137418 - 4.2e-16 59.2 18.0 4.2e-16 59.2 18.0 3.1 2 1 1 3 3 3 1 Protein of unknown function (DUF2838) Abhydro_lipase PF04083.16 ORF134919 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF134919 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold PA PF02225.22 ORF130502 - 4.6e-06 26.6 0.0 8.9e-06 25.6 0.0 1.5 1 0 0 1 1 1 1 PA domain Baculo_gp41 PF04700.12 ORF130502 - 0.13 12.0 0.2 0.27 11.0 0.2 1.5 1 0 0 1 1 1 0 Structural glycoprotein p40/gp41 conserved region Abhydro_lipase PF04083.16 ORF128314 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF128314 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold DUF1664 PF07889.12 ORF126621 - 0.31 11.1 2.9 16 5.5 1.5 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Fez1 PF06818.15 ORF126621 - 0.32 11.4 6.7 1.3 9.4 6.6 2.0 1 1 0 1 1 1 0 Fez1 MbeD_MobD PF04899.12 ORF126621 - 0.39 10.9 5.0 4.8 7.4 0.4 2.6 2 0 0 2 2 2 0 MbeD/MobD like DUF745 PF05335.13 ORF126621 - 4.6 6.9 7.6 2.2 8.0 2.5 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Pkinase PF00069.25 ORF125435 - 3.4e-73 246.3 0.3 9.5e-73 244.8 0.2 1.7 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF125435 - 1.4e-34 119.6 0.0 1.8e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF125435 - 1.1e-06 28.1 0.0 2.4e-05 23.8 0.0 2.1 1 1 1 2 2 2 1 Kinase-like Abhydro_lipase PF04083.16 ORF124884 - 1.2e-15 56.8 0.0 2e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF124884 - 2.3e-08 34.0 0.0 1.3e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Glyco_transf_11 PF01531.16 ORF116131 - 0.0061 15.8 0.1 0.0087 15.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 11 DUF2838 PF10998.8 ORF106863 - 4.2e-16 59.2 18.0 4.2e-16 59.2 18.0 3.1 2 1 1 3 3 3 1 Protein of unknown function (DUF2838) RicinB_lectin_2 PF14200.6 ORF106703 - 0.087 13.6 2.4 1 10.1 0.1 3.5 2 1 3 5 5 5 0 Ricin-type beta-trefoil lectin domain-like Peptidase_C1 PF00112.23 ORF10622 - 1.3e-55 188.8 4.6 2.1e-55 188.2 4.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF10622 - 3.6e-13 49.7 7.2 3.6e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF2838 PF10998.8 ORF104806 - 4.2e-16 59.2 18.0 4.2e-16 59.2 18.0 3.1 2 1 1 3 3 3 1 Protein of unknown function (DUF2838) Ketoacyl-synt_C PF02801.22 ORF103124 - 4.6e-29 100.8 0.0 6.4e-29 100.4 0.0 1.2 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain KAsynt_C_assoc PF16197.5 ORF103124 - 0.0046 17.4 0.1 0.0077 16.7 0.1 1.4 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension AMPK1_CBM PF16561.5 ORF103124 - 0.048 13.9 0.0 0.39 11.0 0.0 2.1 1 1 1 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase Porin_5 PF16930.5 ORF103124 - 0.082 11.4 0.1 0.12 10.8 0.1 1.1 1 0 0 1 1 1 0 Putative porin Archaeal_AmoA PF12942.7 ORF101923 - 0.014 15.1 8.1 0.057 13.1 1.6 2.5 2 0 0 2 2 2 0 Archaeal ammonia monooxygenase subunit A (AmoA) NAAA-beta PF15508.6 ORF101791 - 5.4e-05 23.4 0.2 0.00016 21.9 0.1 1.9 2 0 0 2 2 2 1 beta subunit of N-acylethanolamine-hydrolyzing acid amidase EIF_2_alpha PF07541.12 NODE_14536_length_1167_cov_10.916961_g10944_i0reverse_frame_1 - 0.091 12.9 0.0 0.25 11.5 0.0 1.6 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 2 alpha subunit AIM3 PF17096.5 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 0.078 13.9 1.0 0.078 13.9 1.0 1.8 2 0 0 2 2 2 0 Altered inheritance of mitochondria protein 3 Med15 PF09606.10 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 0.11 11.2 11.9 0.14 10.9 11.9 1.1 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal Presenilin PF01080.17 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 0.22 10.2 1.0 0.29 9.9 1.0 1.1 1 0 0 1 1 1 0 Presenilin Pex14_N PF04695.13 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 0.37 11.4 8.4 1.6 9.4 5.3 2.3 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF2722 PF10846.8 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 2.4 7.0 15.4 3.3 6.6 15.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) TFIIA PF03153.13 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 2.5 8.0 14.9 3.7 7.4 14.9 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit eIF-3_zeta PF05091.12 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_1 - 6.4 5.6 11.5 9.3 5.1 11.5 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) RSN1_7TM PF02714.15 ORF99529 - 8.9e-05 21.9 1.8 8.9e-05 21.9 1.8 1.9 2 0 0 2 2 2 1 Calcium-dependent channel, 7TM region, putative phosphate MotB_plug PF13677.6 ORF99529 - 0.095 12.3 0.2 0.095 12.3 0.2 2.2 3 0 0 3 3 3 0 Membrane MotB of proton-channel complex MotA/MotB DUF3671 PF12420.8 ORF99529 - 0.89 9.7 4.1 2.1 8.4 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function Abhydro_lipase PF04083.16 ORF96238 - 6.4e-18 64.1 0.0 1.2e-17 63.2 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF96238 - 0.00073 19.3 0.3 0.0013 18.4 0.1 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Tox-ART-HYD1 PF15633.6 ORF91769 - 0.0051 17.5 1.6 2.8 8.7 0.1 2.5 2 0 0 2 2 2 2 HYD1 signature containing ADP-ribosyltransferase p450 PF00067.22 ORF88859 - 1.6e-49 169.0 0.0 9.1e-47 159.8 0.0 2.0 2 0 0 2 2 2 2 Cytochrome P450 UCH PF00443.29 ORF82527 - 3.4e-22 79.2 0.0 4.8e-22 78.7 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF82527 - 6.4e-07 29.3 0.0 1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Peptidase_C97 PF05903.14 ORF76493 - 1.5e-21 76.8 0.0 2.8e-21 75.9 0.0 1.4 1 0 0 1 1 1 1 PPPDE putative peptidase domain EF-hand_7 PF13499.6 ORF76493 - 3.5e-10 40.2 0.6 7.6e-10 39.1 0.6 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF76493 - 8.5e-10 37.5 1.3 0.00012 21.3 0.0 4.1 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF76493 - 2.5e-09 36.3 0.3 0.00021 20.9 0.0 3.9 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF76493 - 1.5e-08 33.7 1.1 0.00016 21.0 0.0 3.7 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF76493 - 0.06 13.7 0.8 0.87 9.9 0.1 2.4 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF76493 - 0.097 12.5 2.8 11 6.0 0.1 2.8 3 0 0 3 3 3 0 EF-hand domain pair DUF533 PF04391.12 ORF76493 - 0.23 11.0 0.5 0.37 10.4 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF533) Aminotran_5 PF00266.19 ORF7102 - 8.8e-08 31.5 0.0 1.6e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Pyridoxal_deC PF00282.19 ORF7102 - 2.4e-05 23.3 0.0 4.3e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain PTPlike_phytase PF14566.6 ORF7102 - 0.17 12.0 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Inositol hexakisphosphate p450 PF00067.22 ORF7030 - 5.6e-48 163.8 0.0 6.3e-48 163.7 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Coa1 PF08695.10 ORF7030 - 0.17 11.6 0.0 0.42 10.4 0.0 1.6 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 7TMR-HDED PF07697.11 ORF7030 - 0.18 11.9 0.0 0.28 11.3 0.0 1.2 1 0 0 1 1 1 0 7TM-HD extracellular EF-hand_7 PF13499.6 ORF64960 - 3.3e-14 53.1 4.9 1.4e-11 44.7 0.4 1.8 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF64960 - 8.1e-13 46.9 2.4 9.4e-06 24.8 0.2 3.2 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF64960 - 2.5e-09 36.3 0.6 0.0015 18.3 0.1 3.5 4 0 0 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 ORF64960 - 8.3e-07 28.8 2.2 0.01 15.7 0.2 2.9 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF64960 - 2.2e-06 26.9 0.5 0.034 13.6 0.1 2.7 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF64960 - 0.0015 18.8 2.8 0.0074 16.6 1.0 2.5 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF64960 - 0.0024 17.8 0.4 0.04 13.9 0.0 2.2 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_11 PF08976.11 ORF64960 - 0.16 12.8 0.0 0.34 11.8 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain Abhydro_lipase PF04083.16 ORF61058 - 5.1e-17 61.2 0.1 1.2e-16 60.0 0.1 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF61058 - 1.2e-10 41.5 0.0 2.6e-10 40.4 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF61058 - 5.7e-05 22.5 0.0 0.00035 19.9 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 LCAT PF02450.15 ORF61058 - 0.016 14.4 0.0 0.024 13.8 0.0 1.2 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase PAF-AH_p_II PF03403.13 ORF61058 - 0.027 13.0 0.1 0.16 10.5 0.0 1.9 2 0 0 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 ORF61058 - 0.047 12.6 0.0 0.086 11.7 0.0 1.4 1 0 0 1 1 1 0 Chlorophyllase enzyme PspB PF06667.12 ORF59056 - 0.11 12.6 1.6 1.6 8.8 0.5 2.8 2 0 0 2 2 2 0 Phage shock protein B SlyX PF04102.12 ORF59056 - 0.12 13.0 3.1 0.2 12.3 1.3 2.2 2 0 0 2 2 2 0 SlyX CCDC92 PF14916.6 ORF59056 - 0.98 9.2 5.7 0.55 10.0 0.3 3.1 3 0 0 3 3 3 0 Coiled-coil domain of unknown function CAP PF00188.26 ORF56541 - 1.5e-07 32.3 2.8 1.9e-07 32.0 0.0 2.3 2 1 0 2 2 2 1 Cysteine-rich secretory protein family Coatomer_WDAD PF04053.14 ORF55948 - 6.2e-72 243.0 0.9 7.3e-72 242.8 0.9 1.1 1 0 0 1 1 1 1 Coatomer WD associated region TPR_8 PF13181.6 ORF55948 - 0.026 14.7 0.6 0.35 11.2 0.0 3.1 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF55948 - 0.44 10.8 2.6 1 9.6 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat zf-RING_2 PF13639.6 ORF48487 - 1.3e-09 38.2 7.4 1.3e-09 38.2 7.4 3.3 3 0 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF48487 - 1.6e-07 30.9 5.9 1.6e-07 30.9 5.9 2.4 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF48487 - 5.1e-07 29.5 7.0 5.1e-07 29.5 7.0 2.9 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF48487 - 1.3e-05 25.4 7.5 6.4e-05 23.2 7.5 2.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF48487 - 2.8e-05 24.0 2.8 2.8e-05 24.0 2.8 2.1 2 0 0 2 2 1 1 RING-type zinc-finger FANCL_C PF11793.8 ORF48487 - 0.00092 19.3 6.3 0.00092 19.3 6.3 2.6 2 1 0 2 2 2 1 FANCL C-terminal domain zf-RING_5 PF14634.6 ORF48487 - 0.0011 18.8 5.5 0.0011 18.8 5.5 2.4 3 0 0 3 3 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF48487 - 0.0026 17.5 6.2 0.0026 17.5 6.2 2.8 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF48487 - 0.0059 16.2 4.8 0.0059 16.2 4.8 2.3 3 0 0 3 3 1 1 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF48487 - 0.015 15.2 5.7 0.015 15.2 5.7 2.5 3 1 0 3 3 2 0 PHD-finger Prok-RING_1 PF14446.6 ORF48487 - 0.017 15.0 2.4 0.017 15.0 2.4 2.9 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zf-ANAPC11 PF12861.7 ORF48487 - 0.023 14.7 3.6 0.023 14.7 3.6 2.9 4 1 0 4 4 4 0 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 ORF48487 - 0.029 14.5 4.8 0.1 12.7 4.8 2.1 1 1 0 1 1 1 0 RING-variant domain Endotoxin_C PF03944.14 ORF48487 - 1.7 9.0 7.7 0.64 10.3 4.6 1.9 2 1 0 2 2 2 0 delta endotoxin DUF3437 PF11919.8 ORF48285 - 6.6e-07 29.2 0.0 1.9e-06 27.7 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF3437) ApoA-II PF04711.13 ORF48285 - 0.052 13.7 0.1 0.21 11.8 0.1 2.0 2 0 0 2 2 2 0 Apolipoprotein A-II (ApoA-II) Ion_trans PF00520.31 ORF46790 - 3.3e-10 39.6 12.0 1.7e-09 37.3 12.0 1.8 1 1 0 1 1 1 1 Ion transport protein Phage_holin_3_5 PF16085.5 ORF46790 - 0.023 14.8 0.2 0.072 13.2 0.2 1.8 1 0 0 1 1 1 0 Bacteriophage holin Hol, superfamily III UCH PF00443.29 ORF38389 - 3.4e-22 79.2 0.0 4.8e-22 78.7 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF38389 - 6.4e-07 29.3 0.0 1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Peptidase_S49 PF01343.18 ORF3185 - 1.3e-33 116.1 0.0 3.1e-33 114.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase family S49 Peptidase_S49_N PF08496.10 ORF3185 - 7.5e-20 71.6 0.0 1.1e-19 70.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal CLP_protease PF00574.23 ORF3185 - 8.4e-06 25.8 0.0 0.0013 18.7 0.0 2.2 1 1 1 2 2 2 2 Clp protease DUF4192 PF13830.6 ORF3185 - 0.0057 16.8 0.2 0.0088 16.1 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4192) SDH_sah PF01972.16 ORF3185 - 0.06 12.3 0.0 0.094 11.7 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF3185 - 0.12 12.6 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) TnsD PF15978.5 ORF3185 - 0.21 10.6 0.0 8.6 5.2 0.0 2.2 2 0 0 2 2 2 0 Tn7-like transposition protein D SAM_2 PF07647.17 ORF28582 - 0.00012 22.1 0.0 0.00022 21.3 0.0 1.4 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) PspB PF06667.12 ORF25324 - 0.11 12.6 1.6 1.6 8.8 0.5 2.8 2 0 0 2 2 2 0 Phage shock protein B SlyX PF04102.12 ORF25324 - 0.12 13.0 3.1 0.2 12.3 1.3 2.2 2 0 0 2 2 2 0 SlyX CCDC92 PF14916.6 ORF25324 - 0.98 9.2 5.7 0.55 10.0 0.3 3.1 3 0 0 3 3 3 0 Coiled-coil domain of unknown function Peptidase_S49 PF01343.18 ORF25184 - 1.3e-33 116.1 0.0 3.1e-33 114.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase family S49 Peptidase_S49_N PF08496.10 ORF25184 - 7.5e-20 71.6 0.0 1.1e-19 70.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal CLP_protease PF00574.23 ORF25184 - 8.4e-06 25.8 0.0 0.0013 18.7 0.0 2.2 1 1 1 2 2 2 2 Clp protease DUF4192 PF13830.6 ORF25184 - 0.0057 16.8 0.2 0.0088 16.1 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4192) SDH_sah PF01972.16 ORF25184 - 0.06 12.3 0.0 0.094 11.7 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF25184 - 0.12 12.6 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) TnsD PF15978.5 ORF25184 - 0.21 10.6 0.0 8.6 5.2 0.0 2.2 2 0 0 2 2 2 0 Tn7-like transposition protein D Vwaint PF14624.6 ORF2110 - 1.9e-26 92.0 0.0 3.2e-26 91.3 0.0 1.4 1 0 0 1 1 1 1 VWA / Hh protein intein-like VWA PF00092.28 ORF2110 - 0.013 15.7 0.0 0.031 14.5 0.0 1.6 2 0 0 2 2 2 0 von Willebrand factor type A domain FtsA PF14450.6 ORF19550 - 1.8e-30 105.4 0.3 9.4e-25 87.0 0.0 2.1 2 0 0 2 2 2 2 Cell division protein FtsA SHS2_FTSA PF02491.20 ORF19550 - 2.4e-30 104.7 2.2 5e-30 103.7 2.2 1.6 1 0 0 1 1 1 1 SHS2 domain inserted in FTSA PilM_2 PF11104.8 ORF19550 - 3.3e-10 39.5 0.2 8.2e-07 28.4 0.0 2.6 2 1 0 2 2 2 2 Type IV pilus assembly protein PilM; MreB_Mbl PF06723.13 ORF19550 - 5.4e-10 38.6 0.3 5.4e-10 38.6 0.3 2.0 2 1 0 2 2 2 1 MreB/Mbl protein EutA PF06277.11 ORF19550 - 0.0011 17.9 0.4 0.0027 16.6 0.1 1.8 2 0 0 2 2 2 1 Ethanolamine utilisation protein EutA DDR PF08841.10 ORF19550 - 0.0015 17.6 1.2 0.0059 15.6 0.5 2.0 1 1 1 2 2 2 1 Diol dehydratase reactivase ATPase-like domain Actin PF00022.19 ORF19550 - 0.02 13.5 0.7 4.7 5.7 0.0 2.5 2 1 0 3 3 3 0 Actin StbA PF06406.11 ORF19550 - 0.074 12.3 0.1 1.4 8.0 0.0 2.3 2 0 0 2 2 2 0 StbA protein ANF_receptor PF01094.28 ORF19550 - 0.09 11.9 0.0 0.12 11.4 0.0 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region SrfB PF07520.11 ORF19550 - 0.15 9.9 0.1 0.88 7.4 0.1 1.8 2 0 0 2 2 2 0 Virulence factor SrfB Abhydro_lipase PF04083.16 ORF141681 - 5.1e-17 61.2 0.1 1.2e-16 60.0 0.1 1.6 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF141681 - 1.2e-10 41.5 0.0 2.6e-10 40.4 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF141681 - 5.7e-05 22.5 0.0 0.00035 19.9 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 LCAT PF02450.15 ORF141681 - 0.016 14.4 0.0 0.024 13.8 0.0 1.2 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase PAF-AH_p_II PF03403.13 ORF141681 - 0.027 13.0 0.1 0.16 10.5 0.0 1.9 2 0 0 2 2 2 0 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 ORF141681 - 0.047 12.6 0.0 0.086 11.7 0.0 1.4 1 0 0 1 1 1 0 Chlorophyllase enzyme Peptidase_C97 PF05903.14 ORF140007 - 1.5e-21 76.8 0.0 2.8e-21 75.9 0.0 1.4 1 0 0 1 1 1 1 PPPDE putative peptidase domain EF-hand_7 PF13499.6 ORF140007 - 3.5e-10 40.2 0.6 7.6e-10 39.1 0.6 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF140007 - 8.5e-10 37.5 1.3 0.00012 21.3 0.0 4.1 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF140007 - 2.5e-09 36.3 0.3 0.00021 20.9 0.0 3.9 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF140007 - 1.5e-08 33.7 1.1 0.00016 21.0 0.0 3.7 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF140007 - 0.06 13.7 0.8 0.87 9.9 0.1 2.4 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF140007 - 0.097 12.5 2.8 11 6.0 0.1 2.8 3 0 0 3 3 3 0 EF-hand domain pair DUF533 PF04391.12 ORF140007 - 0.23 11.0 0.5 0.37 10.4 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF533) Peptidase_S49 PF01343.18 ORF139173 - 1.3e-33 116.1 0.0 3.1e-33 114.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase family S49 Peptidase_S49_N PF08496.10 ORF139173 - 7.5e-20 71.6 0.0 1.1e-19 70.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal CLP_protease PF00574.23 ORF139173 - 8.4e-06 25.8 0.0 0.0013 18.7 0.0 2.2 1 1 1 2 2 2 2 Clp protease DUF4192 PF13830.6 ORF139173 - 0.0057 16.8 0.2 0.0088 16.1 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4192) SDH_sah PF01972.16 ORF139173 - 0.06 12.3 0.0 0.094 11.7 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF139173 - 0.12 12.6 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) TnsD PF15978.5 ORF139173 - 0.21 10.6 0.0 8.6 5.2 0.0 2.2 2 0 0 2 2 2 0 Tn7-like transposition protein D Peptidase_S49 PF01343.18 ORF136006 - 1.3e-33 116.1 0.0 3.1e-33 114.9 0.0 1.6 2 0 0 2 2 2 1 Peptidase family S49 Peptidase_S49_N PF08496.10 ORF136006 - 7.5e-20 71.6 0.0 1.1e-19 70.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal CLP_protease PF00574.23 ORF136006 - 8.4e-06 25.8 0.0 0.0013 18.7 0.0 2.2 1 1 1 2 2 2 2 Clp protease DUF4192 PF13830.6 ORF136006 - 0.0057 16.8 0.2 0.0088 16.1 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4192) SDH_sah PF01972.16 ORF136006 - 0.06 12.3 0.0 0.094 11.7 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF136006 - 0.12 12.6 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) TnsD PF15978.5 ORF136006 - 0.21 10.6 0.0 8.6 5.2 0.0 2.2 2 0 0 2 2 2 0 Tn7-like transposition protein D NAD_binding_6 PF08030.12 ORF133609 - 6.2e-20 71.9 0.1 1.4e-19 70.7 0.1 1.6 2 0 0 2 2 2 1 Ferric reductase NAD binding domain FAD_binding_8 PF08022.12 ORF133609 - 2.1e-17 63.2 0.1 6.3e-17 61.6 0.1 1.8 1 0 0 1 1 1 1 FAD-binding domain DUF4876 PF16215.5 ORF133609 - 0.045 13.7 0.7 0.17 11.9 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4876) FAD_binding_6 PF00970.24 ORF133609 - 0.049 14.0 0.1 0.29 11.5 0.0 2.3 3 0 0 3 3 3 0 Oxidoreductase FAD-binding domain Ferric_reduct PF01794.19 ORF133609 - 0.75 9.9 4.9 0.37 10.9 0.6 2.8 4 0 0 4 4 4 0 Ferric reductase like transmembrane component ABC_tran PF00005.27 ORF132109 - 4.9e-37 127.5 0.0 8.1e-37 126.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter NIL PF09383.10 ORF132109 - 2.1e-20 72.4 0.0 3.8e-20 71.5 0.0 1.5 1 0 0 1 1 1 1 NIL domain AAA_21 PF13304.6 ORF132109 - 2.5e-09 37.4 0.5 0.00012 22.0 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF132109 - 4.3e-06 26.3 0.2 2.3e-05 23.9 0.2 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF132109 - 1.9e-05 24.9 0.4 0.00012 22.3 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF132109 - 0.00081 19.8 0.3 0.0026 18.2 0.3 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 ORF132109 - 0.0039 16.8 0.1 3.4 7.2 0.0 3.1 3 0 0 3 3 3 1 AAA domain AAA_29 PF13555.6 ORF132109 - 0.0066 16.2 0.0 0.015 15.0 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF132109 - 0.014 15.3 0.1 0.026 14.4 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase SbcCD_C PF13558.6 ORF132109 - 0.029 14.6 0.2 0.23 11.7 0.2 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TniB PF05621.11 ORF132109 - 0.049 13.0 0.0 0.8 9.1 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein ABC_ATPase PF09818.9 ORF132109 - 0.11 11.3 0.0 4.8 5.9 0.0 2.2 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.6 ORF132109 - 0.11 12.6 0.1 0.33 11.1 0.0 2.0 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 ORF132109 - 0.17 12.0 0.0 0.54 10.3 0.0 1.9 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF132109 - 0.18 12.3 0.1 0.32 11.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain NAD_binding_6 PF08030.12 ORF131789 - 8.8e-20 71.4 0.1 2e-19 70.2 0.1 1.6 2 0 0 2 2 2 1 Ferric reductase NAD binding domain FAD_binding_8 PF08022.12 ORF131789 - 2.1e-17 63.2 0.1 6.3e-17 61.6 0.1 1.8 1 0 0 1 1 1 1 FAD-binding domain FAD_binding_6 PF00970.24 ORF131789 - 0.048 14.0 0.0 0.29 11.5 0.0 2.3 3 0 0 3 3 3 0 Oxidoreductase FAD-binding domain DUF4876 PF16215.5 ORF131789 - 0.068 13.2 0.6 0.27 11.2 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4876) Ferric_reduct PF01794.19 ORF131789 - 8.7 6.5 8.7 0.37 10.9 0.6 2.9 5 0 0 5 5 5 0 Ferric reductase like transmembrane component Peptidase_C1 PF00112.23 ORF129576 - 1.3e-55 188.8 4.6 2.1e-55 188.2 4.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF129576 - 3.6e-13 49.7 7.2 3.6e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C97 PF05903.14 ORF117412 - 1.5e-21 76.8 0.0 2.8e-21 75.9 0.0 1.4 1 0 0 1 1 1 1 PPPDE putative peptidase domain EF-hand_7 PF13499.6 ORF117412 - 3.5e-10 40.2 0.6 7.6e-10 39.1 0.6 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF117412 - 8.5e-10 37.5 1.3 0.00012 21.3 0.0 4.1 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF117412 - 2.5e-09 36.3 0.3 0.00021 20.9 0.0 3.9 4 0 0 4 4 4 2 EF-hand domain EF-hand_5 PF13202.6 ORF117412 - 1.5e-08 33.7 1.1 0.00016 21.0 0.0 3.7 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF117412 - 0.06 13.7 0.8 0.87 9.9 0.1 2.4 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 ORF117412 - 0.097 12.5 2.8 11 6.0 0.1 2.8 3 0 0 3 3 3 0 EF-hand domain pair DUF533 PF04391.12 ORF117412 - 0.23 11.0 0.5 0.37 10.4 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF533) Abhydro_lipase PF04083.16 ORF114145 - 6.7e-19 67.2 0.0 1.3e-18 66.3 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF114145 - 1.1e-06 28.6 0.3 1.8e-06 27.8 0.1 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF114145 - 0.064 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 MMS19_C PF12460.8 ORF113546 - 7.3e-05 22.0 0.0 0.00036 19.8 0.0 2.0 1 1 0 1 1 1 1 RNAPII transcription regulator C-terminal RTP1_C1 PF10363.9 ORF113546 - 0.073 13.3 0.0 13 6.0 0.0 2.5 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 3HBOH PF10605.9 ORF113546 - 0.079 11.2 0.5 0.11 10.7 0.5 1.1 1 0 0 1 1 1 0 3HB-oligomer hydrolase (3HBOH) Aldedh PF00171.22 ORF113233 - 2.6e-152 507.5 0.1 3e-152 507.4 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 ORF113233 - 0.21 11.0 0.0 1.7 8.0 0.0 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1487) LapA_dom PF06305.11 ORF112062 - 0.18 11.6 0.2 0.33 10.8 0.2 1.4 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF347 PF03988.12 ORF112062 - 0.37 11.0 4.0 0.28 11.4 0.9 2.2 2 0 0 2 2 2 0 Repeat of Unknown Function (DUF347) Abhydro_lipase PF04083.16 ORF10665 - 3.2e-19 68.3 0.0 5.5e-19 67.5 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF10665 - 5.7e-08 32.7 1.1 1.1e-06 28.4 0.3 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold MGC-24 PF05283.11 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_3 - 0.045 14.2 13.3 0.084 13.3 13.3 1.3 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin FSA_C PF10479.9 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_3 - 0.055 11.6 10.5 0.075 11.2 10.5 1.1 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Mucin PF01456.17 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_3 - 0.18 11.8 37.1 0.33 10.9 37.1 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein AJAP1_PANP_C PF15298.6 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_3 - 1.5 9.0 18.0 2.5 8.3 18.0 1.3 1 0 0 1 1 1 0 AJAP1/PANP C-terminus Menin PF05053.13 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_2 - 1.2 7.4 4.0 1.6 7.0 4.0 1.1 1 0 0 1 1 1 0 Menin Secretin_N_2 PF07655.13 NODE_14532_length_1167_cov_88.395760_g10940_i0reverse_frame_2 - 2.2 8.9 10.0 5 7.7 9.3 1.8 2 0 0 2 2 2 0 Secretin N-terminal domain Shisa PF13908.6 NODE_14532_length_1167_cov_88.395760_g10940_i0forward_frame_3 - 0.001 19.4 0.2 0.0034 17.7 0.2 1.9 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF3040 PF11239.8 NODE_14532_length_1167_cov_88.395760_g10940_i0forward_frame_3 - 0.64 10.3 9.8 1.4 9.2 9.8 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) 4HBT PF03061.22 ORF99989 - 0.00047 20.4 0.4 0.76 10.2 0.2 2.6 2 0 0 2 2 2 2 Thioesterase superfamily IPU_b_solenoid PF18783.1 ORF99989 - 0.14 12.2 0.3 9.3 6.4 0.0 2.8 2 0 0 2 2 2 0 Isopullulanase beta-solenoid repeat Aminotran_5 PF00266.19 ORF93271 - 1.7e-46 158.9 0.0 1.9e-46 158.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V TrkH PF02386.16 ORF85836 - 8.9e-65 219.0 7.7 1.2e-64 218.7 7.7 1.1 1 0 0 1 1 1 1 Cation transport protein Peptidase_U4 PF03419.13 ORF85836 - 0.034 13.4 3.6 0.25 10.6 0.1 2.2 2 0 0 2 2 2 0 Sporulation factor SpoIIGA PIRT PF15099.6 ORF85836 - 0.45 10.1 1.9 1.2 8.8 1.9 1.6 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family ABC_tran PF00005.27 ORF81882 - 3e-34 118.5 0.0 4.4e-34 118.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF81882 - 9.3e-10 38.8 0.1 0.00027 20.9 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF81882 - 6.1e-07 29.1 0.0 2.2e-06 27.3 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 ORF81882 - 9.7e-06 25.5 0.0 1.1e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF81882 - 0.00013 22.3 0.0 0.00031 21.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF81882 - 0.00013 21.6 0.0 0.00027 20.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF81882 - 0.0002 21.3 0.0 0.00041 20.3 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 ORF81882 - 0.00037 21.1 0.1 0.00061 20.3 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF81882 - 0.00053 20.4 0.0 0.0011 19.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain Rad17 PF03215.15 ORF81882 - 0.00072 19.5 0.0 0.0014 18.5 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain PRK PF00485.18 ORF81882 - 0.015 15.1 0.0 0.038 13.7 0.0 1.7 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_30 PF13604.6 ORF81882 - 0.039 13.7 0.0 0.43 10.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF81882 - 0.057 13.6 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF81882 - 0.11 12.1 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF81882 - 0.16 11.9 0.7 0.95 9.4 0.0 2.3 3 0 0 3 3 3 0 NACHT domain G-alpha PF00503.20 ORF81882 - 0.17 11.0 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_5 PF07728.14 ORF81882 - 0.21 11.6 0.0 0.51 10.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PhoH PF02562.16 ORF81882 - 0.22 11.0 0.0 0.6 9.5 0.0 1.8 1 1 0 1 1 1 0 PhoH-like protein MORN PF02493.20 ORF81796 - 2.3e-21 74.4 64.0 1.6e-05 24.5 4.3 10.5 10 1 0 10 10 10 7 MORN repeat AAA PF00004.29 ORF80129 - 1.2e-41 142.2 0.0 2e-41 141.5 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 ORF80129 - 6.9e-10 38.7 0.1 1.6e-09 37.6 0.1 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 ORF80129 - 9.9e-10 38.1 0.2 1.9e-09 37.1 0.2 1.5 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF80129 - 2.7e-06 27.9 0.0 0.001 19.5 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 ORF80129 - 3.7e-06 27.2 0.0 2.4e-05 24.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 ORF80129 - 1.6e-05 24.9 0.1 9.1e-05 22.5 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Prot_ATP_OB_N PF17758.1 ORF80129 - 9.9e-05 21.9 0.2 0.00057 19.5 0.1 2.3 3 0 0 3 3 2 1 Proteasomal ATPase OB N-terminal domain RuvB_N PF05496.12 ORF80129 - 0.0002 21.2 0.0 0.00044 20.0 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF80129 - 0.00094 19.5 0.1 0.032 14.5 0.0 2.4 1 1 1 2 2 2 1 AAA domain DUF815 PF05673.13 ORF80129 - 0.0026 17.0 0.0 0.0044 16.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 ORF80129 - 0.0043 17.6 0.0 0.016 15.7 0.0 2.0 2 0 0 2 2 1 1 AAA domain RNA_helicase PF00910.22 ORF80129 - 0.0051 17.2 0.0 0.012 16.0 0.0 1.6 1 0 0 1 1 1 1 RNA helicase eIF-1a PF01176.19 ORF80129 - 0.0068 16.2 0.0 0.015 15.1 0.0 1.7 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 IstB_IS21 PF01695.17 ORF80129 - 0.0082 15.9 0.0 0.021 14.5 0.0 1.7 1 0 0 1 1 1 1 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF80129 - 0.017 14.5 0.0 0.034 13.5 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 ORF80129 - 0.022 14.8 0.0 0.051 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF80129 - 0.025 14.2 0.0 0.066 12.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF80129 - 0.029 14.1 0.1 0.071 12.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_3 PF07726.11 ORF80129 - 0.03 14.2 0.0 0.065 13.1 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 ORF80129 - 0.035 13.6 0.0 0.092 12.2 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_28 PF13521.6 ORF80129 - 0.039 14.2 0.0 0.077 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 ORF80129 - 0.041 13.1 0.0 0.076 12.2 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain TsaE PF02367.17 ORF80129 - 0.14 12.2 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 ORF80129 - 0.15 12.2 0.0 0.28 11.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF80129 - 0.15 11.9 0.1 1 9.3 0.0 2.2 1 1 0 2 2 2 0 NACHT domain AAA_30 PF13604.6 ORF80129 - 0.16 11.7 0.0 0.32 10.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 ORF80129 - 0.16 11.7 0.4 0.97 9.2 0.0 2.1 2 0 0 2 2 2 0 AAA domain Cupin_2 PF07883.11 ORF7665 - 1.2e-06 28.1 0.0 4.9e-06 26.2 0.0 2.1 2 0 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 ORF7665 - 1.7e-05 24.5 0.1 0.00028 20.5 0.1 2.1 2 0 0 2 2 2 1 Cupin Cupin_3 PF05899.12 ORF7665 - 0.00059 19.5 0.1 0.0017 18.0 0.1 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF861) NYN PF01936.18 ORF52535 - 3e-11 44.0 0.1 7.5e-11 42.7 0.1 1.7 1 1 0 1 1 1 1 NYN domain Syntaxin-6_N PF09177.11 ORF46177 - 0.0082 16.7 3.2 0.0082 16.7 3.2 3.2 2 1 1 3 3 3 1 Syntaxin 6, N-terminal DUF2744 PF10910.8 ORF46177 - 0.0082 16.1 0.1 0.027 14.5 0.1 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF2744) Lectin_N PF03954.14 ORF46177 - 2.7 7.7 9.1 0.9 9.3 4.8 2.3 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain BST2 PF16716.5 ORF46177 - 4.2 8.0 17.8 2.3 8.9 10.1 2.8 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF4337 PF14235.6 ORF46177 - 8.3 6.5 19.1 0.71 10.0 10.5 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4337) Pkinase PF00069.25 ORF42603 - 9.7e-68 228.4 0.0 1.8e-67 227.5 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF42603 - 8.3e-35 120.3 0.0 1.7e-34 119.3 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF42603 - 6.3e-05 22.4 0.0 0.00089 18.7 0.0 2.3 2 0 0 2 2 2 1 Kinase-like YukC PF10140.9 ORF42603 - 0.0012 17.8 0.2 0.0056 15.6 0.0 2.0 2 0 0 2 2 2 1 WXG100 protein secretion system (Wss), protein YukC Seadorna_VP7 PF07387.11 ORF42603 - 0.0015 17.6 0.0 0.0027 16.8 0.0 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 Pkinase_fungal PF17667.1 ORF42603 - 0.016 14.0 0.0 0.047 12.5 0.0 1.7 2 0 0 2 2 2 0 Fungal protein kinase APH PF01636.23 ORF42603 - 0.093 12.6 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family IFT81_CH PF18383.1 ORF38822 - 8.8e-28 97.0 0.0 8.8e-28 97.0 0.0 2.6 2 1 2 4 4 4 1 Intraflagellar transport 81 calponin homology domain Tricorn_C1 PF14684.6 ORF38822 - 0.087 12.9 0.4 0.41 10.8 0.0 2.3 3 0 0 3 3 3 0 Tricorn protease C1 domain LPP PF04728.13 ORF38822 - 0.16 12.4 6.3 0.99 9.8 1.5 3.3 2 0 0 2 2 2 0 Lipoprotein leucine-zipper HALZ PF02183.18 ORF38822 - 0.63 10.3 7.6 11 6.3 1.4 3.2 2 1 1 3 3 3 0 Homeobox associated leucine zipper TSC22 PF01166.18 ORF38822 - 1.3 9.4 7.7 39 4.7 3.9 3.4 2 1 1 3 3 3 0 TSC-22/dip/bun family DUF1664 PF07889.12 ORF38822 - 1.9 8.5 17.6 3 7.9 3.7 3.7 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) MTS PF05175.14 ORF23176 - 7.2e-60 201.4 0.0 1.2e-58 197.5 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 ORF23176 - 2.8e-10 40.2 0.0 1.3e-09 38.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF23176 - 4.3e-10 40.2 0.0 1.2e-09 38.7 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF23176 - 1.3e-08 35.5 0.0 8.8e-08 32.8 0.0 2.4 3 0 0 3 3 3 1 Methyltransferase domain PrmA PF06325.13 ORF23176 - 1.2e-05 24.8 0.0 4.6e-05 23.0 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.6 ORF23176 - 0.00011 22.1 0.0 0.00019 21.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 ORF23176 - 0.00034 20.3 0.0 0.00066 19.4 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_11 PF08241.12 ORF23176 - 0.00037 21.1 0.0 0.00094 19.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 ORF23176 - 0.00083 19.1 0.1 0.0045 16.7 0.0 2.0 2 0 0 2 2 2 1 Lysine methyltransferase Methyltransf_18 PF12847.7 ORF23176 - 0.0016 18.4 0.0 0.0034 17.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_10 PF05971.12 ORF23176 - 0.003 17.0 0.0 0.0051 16.2 0.0 1.3 1 0 0 1 1 1 1 RNA methyltransferase Amino_oxidase PF01593.24 ORF21072 - 4.6e-15 55.9 0.0 6e-14 52.2 0.0 2.0 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Pyr_redox_2 PF07992.14 ORF21072 - 0.00028 20.2 0.1 0.015 14.5 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF21072 - 0.00059 19.1 0.0 0.00084 18.6 0.0 1.2 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 ORF21072 - 0.00068 18.8 1.5 0.00099 18.3 0.4 1.7 2 0 0 2 2 2 1 Lycopene cyclase protein FAD_binding_2 PF00890.24 ORF21072 - 0.003 16.7 0.8 0.07 12.2 0.1 2.1 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.19 ORF21072 - 0.0038 16.5 0.3 0.77 8.9 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_9 PF13454.6 ORF21072 - 0.0044 17.0 1.1 0.23 11.5 0.2 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding DAO PF01266.24 ORF21072 - 0.012 15.3 10.6 0.35 10.4 10.3 2.3 1 1 0 1 1 1 0 FAD dependent oxidoreductase HI0933_like PF03486.14 ORF21072 - 0.014 14.1 0.4 0.17 10.6 0.4 2.0 2 0 0 2 2 2 0 HI0933-like protein NAD_binding_8 PF13450.6 ORF21072 - 0.044 14.0 1.0 0.2 11.9 1.0 2.1 1 1 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DUF442 PF04273.13 ORF21072 - 0.045 13.8 0.1 0.097 12.8 0.1 1.5 1 0 0 1 1 1 0 Putative phosphatase (DUF442) AlaDh_PNT_C PF01262.21 ORF21072 - 0.12 11.7 0.1 0.2 10.9 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 ORF21072 - 0.18 12.4 0.1 27 5.4 0.1 2.6 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase ShK PF01549.24 ORF16668 - 8.4e-07 29.4 21.0 0.00049 20.6 2.3 3.5 3 0 0 3 3 3 2 ShK domain-like DUF4741 PF15897.5 ORF16668 - 0.0046 16.8 0.1 0.01 15.7 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4741) GlnD_UR_UTase PF08335.11 ORF16668 - 0.1 12.7 1.7 0.44 10.6 0.8 2.1 1 1 1 2 2 2 0 GlnD PII-uridylyltransferase Abhydro_lipase PF04083.16 ORF13570 - 3.3e-21 74.6 0.0 9.4e-21 73.2 0.1 1.7 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF13570 - 3.6e-09 36.6 2.0 1.4e-08 34.7 2.0 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF13570 - 1.8e-07 30.7 0.0 0.0017 17.6 0.0 2.9 2 1 1 3 3 3 2 Serine aminopeptidase, S33 AA_permease_2 PF13520.6 ORF134972 - 2.9e-44 151.6 42.0 3.6e-44 151.3 42.0 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF134972 - 3.1e-31 108.5 38.4 8.2e-31 107.1 38.5 1.6 1 1 0 1 1 1 1 Amino acid permease Aminotran_5 PF00266.19 ORF123163 - 1.7e-46 158.9 0.0 1.9e-46 158.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Peptidase_M24 PF00557.24 ORF117695 - 5.2e-18 65.5 0.2 6.4e-18 65.2 0.2 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 MORN PF02493.20 ORF114736 - 2.3e-21 74.4 63.8 1.6e-05 24.5 4.3 10.4 10 1 0 10 10 10 7 MORN repeat zf-trcl PF13451.6 ORF1114 - 0.21 11.5 0.2 0.21 11.5 0.2 1.8 2 0 0 2 2 2 0 Probable zinc-ribbon domain RINGv PF12906.7 ORF107256 - 9.9e-15 54.4 5.1 2.2e-14 53.3 5.1 1.7 1 0 0 1 1 1 1 RING-variant domain FHA PF00498.26 ORF107256 - 5.3e-07 29.9 0.2 1.2e-06 28.8 0.2 1.6 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF107256 - 5.5e-05 23.4 0.0 0.00011 22.4 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 ORF107256 - 0.0031 17.6 5.4 0.0069 16.5 5.4 1.6 1 0 0 1 1 1 1 FANCL C-terminal domain zf-DBF PF07535.12 ORF107256 - 0.51 10.5 4.1 0.31 11.2 0.4 2.6 2 0 0 2 2 2 0 DBF zinc finger ABC1 PF03109.16 ORF103452 - 0.09 13.0 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 ABC1 family Gln-synt_C PF00120.24 ORF99660 - 1.2e-16 60.7 0.0 5.8e-15 55.1 0.0 2.0 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Pkinase PF00069.25 ORF97922 - 5.8e-39 134.0 0.0 8e-39 133.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF97922 - 1.5e-24 86.7 0.0 2.2e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF97922 - 1.5e-06 27.3 0.0 2.3e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF97922 - 0.00054 19.4 0.0 0.00079 18.8 0.0 1.3 1 0 0 1 1 1 1 Kinase-like EamA PF00892.20 ORF9732 - 9.1e-12 45.3 31.8 8.1e-07 29.3 11.5 2.4 2 1 0 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 ORF9732 - 1.6e-05 24.2 5.7 0.0022 17.2 2.3 2.4 2 0 0 2 2 2 2 Magnesium transporter NIPA Sugar_transport PF06800.12 ORF9732 - 0.069 12.5 16.4 0.024 14.0 11.3 2.4 2 1 1 3 3 3 0 Sugar transport protein EamA PF00892.20 ORF93316 - 9.1e-12 45.3 31.8 8.1e-07 29.3 11.5 2.4 2 1 0 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 ORF93316 - 1.6e-05 24.2 5.7 0.0022 17.2 2.3 2.4 2 0 0 2 2 2 2 Magnesium transporter NIPA Sugar_transport PF06800.12 ORF93316 - 0.069 12.5 16.4 0.024 14.0 11.3 2.4 2 1 1 3 3 3 0 Sugar transport protein cNMP_binding PF00027.29 ORF90511 - 5e-10 39.3 0.0 8.6e-10 38.6 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF2072 PF09845.9 ORF90511 - 5.1 7.4 8.3 18 5.6 0.2 2.6 1 1 1 2 2 2 0 Zn-ribbon containing protein PPR_2 PF13041.6 ORF90077 - 7.3e-27 93.3 0.0 6.9e-09 35.8 0.0 6.0 3 2 3 6 6 6 5 PPR repeat family PPR_3 PF13812.6 ORF90077 - 1.3e-18 66.8 0.0 8.2e-10 38.6 0.0 4.1 4 0 0 4 4 4 3 Pentatricopeptide repeat domain PPR PF01535.20 ORF90077 - 2e-17 62.1 0.2 0.0013 18.9 0.0 6.6 7 0 0 7 7 7 3 PPR repeat PPR_long PF17177.4 ORF90077 - 5.4e-15 55.3 0.3 1.4e-09 37.7 0.1 2.4 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF90077 - 2.2e-09 36.8 5.2 0.008 15.9 0.0 5.2 5 1 0 5 5 5 3 PPR repeat WW PF00397.26 ORF90077 - 0.0065 16.5 0.1 0.013 15.5 0.1 1.5 1 0 0 1 1 1 1 WW domain T2SSF PF00482.23 ORF90077 - 0.063 13.2 2.6 1.9 8.5 0.0 3.1 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein F TetR_C_11 PF16859.5 ORF90077 - 3.5 8.0 17.0 0.12 12.7 0.9 3.8 3 1 0 4 4 4 0 Tetracyclin repressor-like, C-terminal domain PCI PF01399.27 ORF74743 - 6.7e-14 52.3 1.7 1.2e-13 51.4 0.6 2.0 2 0 0 2 2 2 1 PCI domain UBA_2 PF08587.11 ORF74743 - 0.41 10.8 5.4 7.9 6.7 0.5 3.7 3 0 0 3 3 3 0 Ubiquitin associated domain (UBA) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks38.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks38.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks38.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks38.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- cNMP_binding PF00027.29 ORF132262 - 2.6e-07 30.6 0.0 3e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF1281_C PF18406.1 ORF132262 - 0.032 13.9 0.1 0.036 13.8 0.1 1.1 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein MORN PF02493.20 ORF132233 - 2.1e-09 36.7 8.7 5.3e-06 26.0 0.4 3.0 3 0 0 3 3 3 2 MORN repeat DsbC PF11412.8 ORF132179 - 0.11 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Disulphide bond corrector protein DsbC TRP_2 PF08344.11 ORF131981 - 0.027 14.7 0.9 0.03 14.5 0.1 1.4 2 0 0 2 2 2 0 Transient receptor ion channel II bZIP_1 PF00170.21 ORF131584 - 0.0023 18.0 3.5 0.0023 18.0 3.5 2.1 1 1 1 2 2 2 1 bZIP transcription factor DivIC PF04977.15 ORF131584 - 0.0033 17.1 7.0 0.0038 17.0 4.3 1.9 1 1 1 2 2 2 1 Septum formation initiator HALZ PF02183.18 ORF131584 - 0.0035 17.5 6.5 0.0088 16.2 4.0 2.7 1 1 1 2 2 2 1 Homeobox associated leucine zipper Sec66 PF09802.9 ORF131584 - 0.0092 15.6 1.0 0.011 15.3 1.0 1.0 1 0 0 1 1 1 1 Preprotein translocase subunit Sec66 Filament PF00038.21 ORF131584 - 0.01 15.5 6.5 0.01 15.4 6.5 1.0 1 0 0 1 1 1 0 Intermediate filament protein BCAS2 PF05700.11 ORF131584 - 0.014 15.1 4.1 0.014 15.1 4.1 1.0 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 2 (BCAS2) TPR_MLP1_2 PF07926.12 ORF131584 - 0.017 15.2 7.5 0.022 14.8 7.5 1.3 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein GAT PF03127.14 ORF131584 - 0.028 14.7 2.9 0.032 14.5 2.9 1.2 1 0 0 1 1 1 0 GAT domain YabA PF06156.13 ORF131584 - 0.033 14.8 4.1 0.045 14.4 4.1 1.4 1 1 0 1 1 1 0 Initiation control protein YabA DUF4618 PF15397.6 ORF131584 - 0.036 13.5 7.0 0.041 13.3 7.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) NRBF2 PF08961.10 ORF131584 - 0.042 13.5 3.1 0.046 13.3 3.1 1.2 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator HMMR_C PF15908.5 ORF131584 - 0.058 13.7 7.6 0.11 12.8 5.7 1.9 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal JIP_LZII PF16471.5 ORF131584 - 0.064 13.4 4.9 0.48 10.6 0.5 2.1 1 1 1 2 2 2 0 JNK-interacting protein leucine zipper II Uso1_p115_C PF04871.13 ORF131584 - 0.12 12.7 9.9 0.14 12.5 9.9 1.1 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF1640 PF07798.11 ORF131584 - 0.16 12.0 6.3 0.46 10.5 6.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) ZapB PF06005.12 ORF131584 - 0.24 11.9 6.8 1.4 9.4 6.8 2.1 1 1 0 1 1 1 0 Cell division protein ZapB DUF4407 PF14362.6 ORF131584 - 0.42 9.9 3.6 0.43 9.9 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HAUS6_N PF14661.6 ORF131584 - 0.42 10.1 5.7 0.45 10.1 5.7 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus UPF0449 PF15136.6 ORF131584 - 0.52 10.8 5.9 0.59 10.6 5.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 TMCO5 PF14992.6 ORF131584 - 0.59 9.7 8.9 0.63 9.6 8.9 1.0 1 0 0 1 1 1 0 TMCO5 family DUF3139 PF11337.8 ORF131584 - 0.62 10.8 10.8 2.3 8.9 2.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3139) Bap31_Bap29_C PF18035.1 ORF131584 - 0.75 9.8 13.4 2 8.5 1.6 2.2 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain TMPIT PF07851.13 ORF131584 - 1 8.5 7.0 1.2 8.4 7.0 1.1 1 0 0 1 1 1 0 TMPIT-like protein Mem_trans PF03547.18 ORF131584 - 1.3 7.3 2.4 1.4 7.3 2.4 1.0 1 0 0 1 1 1 0 Membrane transport protein LCD1 PF09798.9 ORF131584 - 2.2 6.7 11.6 2.2 6.7 11.6 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein CHD5 PF04420.14 ORF131584 - 5.2 6.9 7.8 6.2 6.7 7.8 1.0 1 0 0 1 1 1 0 CHD5-like protein 60KD_IMP PF02096.20 ORF131584 - 9.7 6.1 7.3 2.1 8.2 0.5 2.0 1 1 1 2 2 2 0 60Kd inner membrane protein TTKRSYEDQ PF10212.9 ORF131380 - 0.21 10.5 0.0 0.24 10.3 0.0 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein TMEM247 PF15444.6 ORF131151 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 T7SS_ESX_EspC PF10824.8 ORF130464 - 0.12 12.9 0.1 0.12 12.9 0.1 1.1 1 0 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm PAN_3 PF08277.12 ORF130411 - 4 7.3 11.5 48 3.9 0.0 3.0 2 1 1 3 3 3 0 PAN-like domain APA3_viroporin PF11289.8 ORF130297 - 0.092 12.3 1.4 0.11 12.0 1.4 1.2 1 1 0 1 1 1 0 Coronavirus accessory protein 3a TFIID-18kDa PF02269.16 ORF130255 - 6.1e-05 23.0 0.0 7.2e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit Uso1_p115_C PF04871.13 ORF130255 - 0.13 12.7 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region TTC5_OB PF16669.5 ORF130155 - 0.06 13.0 0.1 0.13 12.0 0.1 1.6 1 1 1 2 2 2 0 Tetratricopeptide repeat protein 5 OB fold domain MraZ PF02381.18 ORF129295 - 0.085 12.8 0.0 0.099 12.6 0.0 1.1 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like DUF3222 PF11519.8 ORF129188 - 0.081 13.2 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3222) X PF00739.19 ORF128651 - 0.069 13.3 1.6 0.076 13.1 1.6 1.1 1 0 0 1 1 1 0 Trans-activation protein X Orf78 PF06024.12 ORF128318 - 1 9.7 3.7 0.96 9.8 3.3 1.4 1 1 0 1 1 1 0 Orf78 (ac78) COX7a PF02238.15 ORF128013 - 0.071 13.5 0.2 0.13 12.7 0.2 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VII DUF386 PF04074.12 ORF127908 - 2.9e-17 62.9 0.0 3e-17 62.9 0.0 1.0 1 0 0 1 1 1 1 YhcH/YjgK/YiaL Cupin_2 PF07883.11 ORF127908 - 0.0013 18.4 0.0 0.0015 18.2 0.0 1.3 1 1 0 1 1 1 1 Cupin domain Pkinase PF00069.25 ORF127803 - 8.5e-05 22.0 0.8 0.00011 21.6 0.8 1.2 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 ORF127803 - 0.055 13.1 0.8 0.089 12.4 0.4 1.5 1 1 1 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Pox_TAA1 PF03295.14 ORF127113 - 0.095 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Poxvirus trans-activator protein A1 C-terminal Adeno_E3_CR2 PF02439.15 ORF127113 - 0.46 10.3 8.1 2.1 8.2 2.2 2.4 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 Methyltransf_33 PF10017.9 ORF127083 - 0.041 13.0 0.0 0.041 13.0 0.0 1.0 1 0 0 1 1 1 0 Histidine-specific methyltransferase, SAM-dependent VSG_B PF13206.6 ORF126850 - 0.34 10.1 4.6 0.34 10.1 4.6 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain IMS_HHH PF11798.8 ORF126748 - 5.1e-06 26.5 0.1 1.8e-05 24.8 0.1 1.8 2 0 0 2 2 2 1 IMS family HHH motif BAF PF02961.14 ORF126748 - 0.0029 18.0 0.0 0.0033 17.8 0.0 1.2 1 0 0 1 1 1 1 Barrier to autointegration factor Cdd1 PF11731.8 ORF126748 - 0.025 14.8 0.0 0.031 14.5 0.0 1.1 1 0 0 1 1 1 0 Pathogenicity locus DUF2007 PF09413.10 ORF126408 - 0.18 12.0 0.0 0.24 11.6 0.0 1.1 1 0 0 1 1 1 0 Putative prokaryotic signal transducing protein Tail_VII PF17091.5 ORF124512 - 0.054 13.4 0.3 0.11 12.4 0.3 1.6 1 0 0 1 1 1 0 Inovirus G7P protein G-gamma PF00631.22 ORF122964 - 0.016 15.2 0.3 0.022 14.8 0.3 1.2 1 0 0 1 1 1 0 GGL domain FixS PF03597.15 ORF12244 - 3.1 7.6 6.6 14 5.5 0.1 2.3 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type Nbl1_Borealin_N PF10444.9 ORF122111 - 0.14 11.8 0.1 0.22 11.2 0.1 1.3 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Fim-adh_lectin PF09222.10 ORF121708 - 0.11 12.0 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Fimbrial adhesin F17-AG, lectin domain HOK_GEF PF01848.16 ORF120921 - 3.9e-21 74.2 6.9 4.7e-21 73.9 6.9 1.1 1 0 0 1 1 1 1 Hok/gef family DUF4231 PF14015.6 ORF120921 - 0.027 14.9 0.1 0.029 14.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) Glycoprotein_G PF00802.19 ORF120309 - 0.096 12.0 0.9 0.094 12.1 0.9 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G WD40_alt PF14077.6 ORF120307 - 0.06 13.2 0.7 0.4 10.6 0.6 2.2 2 1 0 2 2 2 0 Alternative WD40 repeat motif DUF3275 PF11679.8 ORF119698 - 4.9 7.1 5.9 5.2 7.0 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3275) SpoIIID PF12116.8 ORF119546 - 0.12 12.4 0.0 1.1 9.4 0.0 1.9 1 1 1 2 2 2 0 Stage III sporulation protein D SAM_decarbox PF01536.16 ORF119334 - 0.083 11.9 0.4 0.082 11.9 0.4 1.0 1 0 0 1 1 1 0 Adenosylmethionine decarboxylase TSP_1 PF00090.19 ORF11911 - 0.0065 16.7 1.5 0.51 10.6 0.1 2.2 2 0 0 2 2 2 2 Thrombospondin type 1 domain Oleosin PF01277.17 ORF118261 - 0.0066 16.2 0.4 0.0079 15.9 0.4 1.1 1 0 0 1 1 1 1 Oleosin Tombus_movement PF05318.12 ORF118116 - 0.014 16.2 4.5 0.018 15.9 4.5 1.1 1 0 0 1 1 1 0 Tombusvirus movement protein DUF5323 PF17257.2 ORF118116 - 0.17 11.8 2.1 0.23 11.4 2.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5323) Rho_N PF07498.12 ORF117864 - 0.13 12.2 0.1 0.23 11.4 0.1 1.4 1 0 0 1 1 1 0 Rho termination factor, N-terminal domain zf-HC3 PF16827.5 ORF116425 - 0.00079 19.6 1.5 0.0012 19.0 0.7 1.6 1 1 1 2 2 2 1 zinc-finger NikR_C PF08753.11 ORF115765 - 0.18 12.0 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 NikR C terminal nickel binding domain FHA PF00498.26 ORF115741 - 5.3e-07 29.9 0.0 6.3e-07 29.7 0.0 1.3 1 1 0 1 1 1 1 FHA domain Flu_C_NS1 PF03506.13 ORF113744 - 0.11 12.5 0.3 0.13 12.2 0.3 1.1 1 0 0 1 1 1 0 Influenza C non-structural protein (NS1) Trp_oprn_chp PF09534.10 ORF113726 - 0.084 12.7 1.3 0.097 12.5 1.3 1.2 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF202 PF02656.15 ORF113726 - 0.16 12.5 0.8 0.2 12.1 0.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF202) SseC PF04888.12 ORF113278 - 0.57 9.7 2.3 0.67 9.5 2.3 1.0 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family CENP-N PF05238.13 ORF112917 - 0.14 11.4 0.9 0.15 11.4 0.9 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like DNA_pol_A_exo1 PF01612.20 ORF112773 - 2e-11 43.9 0.0 2.2e-11 43.8 0.0 1.0 1 0 0 1 1 1 1 3'-5' exonuclease Smr PF01713.21 ORF11277 - 1.2e-08 35.2 0.0 1.5e-08 34.9 0.0 1.1 1 0 0 1 1 1 1 Smr domain PalH PF08733.10 ORF112515 - 0.062 12.3 3.7 0.066 12.2 3.7 1.1 1 0 0 1 1 1 0 PalH/RIM21 Cadherin_C_2 PF16492.5 ORF112291 - 1.4 9.7 6.0 3.6 8.4 0.7 2.1 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal Fic_N PF13784.6 ORF110852 - 4.9e-20 71.4 0.0 5.2e-20 71.3 0.0 1.0 1 0 0 1 1 1 1 Fic/DOC family N-terminal UL41A PF17591.2 ORF110784 - 0.11 12.6 0.0 0.15 12.2 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus UL41A DUF5542 PF17696.1 ORF110781 - 0.25 11.5 1.0 0.34 11.1 1.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5542) DUF3399 PF11879.8 ORF110671 - 0.28 11.5 1.1 0.3 11.4 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) HTH_Tnp_Tc3_1 PF11427.8 ORF110134 - 0.054 13.4 0.6 0.086 12.7 0.4 1.5 1 1 0 1 1 1 0 Tc3 transposase Defensin_1 PF00323.19 ORF110108 - 4.3 8.0 13.9 9.2 6.9 5.5 3.0 3 0 0 3 3 3 0 Mammalian defensin DUF999 PF06198.11 ORF110064 - 0.0096 15.9 1.4 0.011 15.8 1.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF999) Ntox34 PF15606.6 ORF109279 - 0.083 13.0 0.6 0.1 12.7 0.6 1.1 1 0 0 1 1 1 0 Bacterial toxin 34 TMEM247 PF15444.6 ORF108890 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 Baculo_IE-1 PF05290.11 ORF107909 - 0.031 14.2 1.9 0.033 14.1 1.9 1.1 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) NB PF04159.13 ORF107830 - 0.59 10.2 10.5 0.68 10.0 10.5 1.1 1 0 0 1 1 1 0 NB glycoprotein PalH PF08733.10 ORF107421 - 0.062 12.3 3.7 0.066 12.2 3.7 1.1 1 0 0 1 1 1 0 PalH/RIM21 SHOCT PF09851.9 ORF107305 - 0.066 13.0 0.1 0.066 13.0 0.1 1.7 2 0 0 2 2 2 0 Short C-terminal domain Ycf70 PF17382.2 ORF107224 - 3 8.3 5.4 6 7.4 0.8 2.0 1 1 0 2 2 2 0 Uncharacterized Ycf70-like TMEM247 PF15444.6 ORF107090 - 4.2 7.4 7.7 4.2 7.3 7.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 EAV_GS PF01309.18 ORF107002 - 0.095 12.3 0.1 0.095 12.3 0.1 1.0 1 0 0 1 1 1 0 Equine arteritis virus small envelope glycoprotein ATP-synt_A PF00119.20 ORF106133 - 0.3 11.0 6.8 0.34 10.8 6.8 1.1 1 0 0 1 1 1 0 ATP synthase A chain NRDD PF13597.6 ORF105811 - 0.078 11.7 0.0 0.079 11.7 0.0 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase DUF3038 PF11237.8 ORF105499 - 0.036 14.1 0.8 0.041 13.9 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) CSN7a_helixI PF18392.1 ORF104637 - 0.24 11.3 2.1 12 5.9 0.1 2.2 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain Cas_csx3 PF09620.10 ORF104238 - 0.063 13.2 0.0 0.074 12.9 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_csx3) CSD PF00313.22 ORF103567 - 8.8e-33 112.0 0.2 9.5e-33 111.9 0.2 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF103567 - 3.2e-05 23.5 0.5 5.3e-05 22.8 0.5 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF4716 PF15837.5 ORF102528 - 0.095 12.8 2.1 0.15 12.1 2.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4716) DUF5472 PF17566.2 ORF102098 - 0.042 13.8 0.6 0.042 13.8 0.6 1.4 2 0 0 2 2 2 0 Family of unknown function (DUF5472) CHORD PF04968.12 ORF101685 - 0.56 11.0 5.2 3.8 8.3 5.2 2.0 1 1 0 1 1 1 0 CHORD ERGIC_N PF13850.6 ORF101638 - 0.084 13.2 0.4 0.095 13.1 0.4 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) TSP_1 PF00090.19 ORF100697 - 0.0065 16.7 1.5 0.51 10.6 0.1 2.2 2 0 0 2 2 2 2 Thrombospondin type 1 domain DUF1700 PF08006.11 ORF100170 - 1.6 8.2 9.1 1.7 8.1 9.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) zf-H2C2_5 PF13909.6 ORF100102 - 0.17 11.6 0.6 0.17 11.6 0.6 1.8 2 0 0 2 2 2 0 C2H2-type zinc-finger domain DUF4819 PF16090.5 NODE_77105_length_205_cov_0.929412_g69164_i0forward_frame_1 - 0.14 12.2 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4819) Rubella_Capsid PF05750.11 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_1 - 0.79 9.3 7.8 0.85 9.2 7.8 1.0 1 0 0 1 1 1 0 Rubella capsid protein DIE2_ALG10 PF04922.12 NODE_77094_length_205_cov_0.935294_g69153_i0forward_frame_1 - 0.0094 15.3 0.1 0.011 15.1 0.1 1.0 1 0 0 1 1 1 1 DIE2/ALG10 family Calsarcin PF05556.11 NODE_77093_length_205_cov_0.941176_g69152_i0reverse_frame_1 - 0.031 13.8 0.1 0.034 13.7 0.1 1.0 1 0 0 1 1 1 0 Calcineurin-binding protein (Calsarcin) RCDG1 PF15725.5 NODE_77084_length_205_cov_0.941176_g69143_i0reverse_frame_1 - 0.013 15.9 1.6 0.013 15.9 1.6 1.4 1 1 0 1 1 1 0 Renal cancer differentiation gene 1 protein Asp_decarbox PF02261.16 NODE_77084_length_205_cov_0.941176_g69143_i0forward_frame_1 - 0.046 13.7 0.1 0.061 13.3 0.1 1.2 1 0 0 1 1 1 0 Aspartate decarboxylase Leader_CPA1 PF08252.11 NODE_77081_length_205_cov_0.941176_g69140_i0forward_frame_1 - 0.015 14.6 5.0 0.28 10.6 0.6 2.3 2 0 0 2 2 2 0 arg-2/CPA1 leader peptide Vmethyltransf PF01660.17 NODE_77081_length_205_cov_0.941176_g69140_i0forward_frame_1 - 0.071 12.0 0.1 0.083 11.8 0.1 1.0 1 0 0 1 1 1 0 Viral methyltransferase Pox_F16 PF04708.12 NODE_77077_length_205_cov_0.941176_g69136_i0forward_frame_1 - 0.078 12.4 0.5 0.078 12.4 0.5 1.0 1 0 0 1 1 1 0 Poxvirus F16 protein DUF3903 PF13043.6 NODE_77075_length_205_cov_0.941176_g69134_i0forward_frame_1 - 0.054 13.3 0.2 0.094 12.5 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) CCDC106 PF15794.5 NODE_77073_length_205_cov_0.941176_g69132_i0reverse_frame_1 - 0.52 10.0 6.9 0.55 9.9 6.9 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 SR-25 PF10500.9 NODE_77073_length_205_cov_0.941176_g69132_i0reverse_frame_1 - 0.54 9.8 18.5 0.6 9.7 18.5 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CYYR1 PF10873.8 NODE_77073_length_205_cov_0.941176_g69132_i0forward_frame_1 - 0.57 10.6 11.4 0.63 10.5 11.4 1.1 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 Ntox14 PF15522.6 NODE_77070_length_205_cov_0.976471_g69129_i0reverse_frame_1 - 0.012 15.1 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 0 Novel toxin 14 Spc42p PF11544.8 NODE_77066_length_205_cov_1.011765_g69125_i0reverse_frame_1 - 0.0033 17.4 1.6 0.0039 17.2 1.6 1.2 1 0 0 1 1 1 1 Spindle pole body component Spc42p YabA PF06156.13 NODE_77066_length_205_cov_1.011765_g69125_i0reverse_frame_1 - 0.019 15.6 0.6 0.022 15.4 0.6 1.1 1 0 0 1 1 1 0 Initiation control protein YabA DUF4834 PF16118.5 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 0.1 13.5 4.1 0.13 13.3 4.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Sigma_reg_N PF13800.6 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 0.16 12.3 7.2 0.22 11.8 7.2 1.3 1 0 0 1 1 1 0 Sigma factor regulator N-terminal NB PF04159.13 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 0.26 11.3 8.0 0.32 11.1 8.0 1.2 1 0 0 1 1 1 0 NB glycoprotein Baculo_11_kDa PF06143.11 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 0.41 10.3 5.4 0.6 9.7 5.4 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family DUF1459 PF07312.11 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_1 - 2.3 8.5 7.6 3.5 7.9 7.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1459) Inositol_P PF00459.25 NODE_77054_length_205_cov_1.088235_g69113_i0forward_frame_1 - 0.24 10.9 0.0 0.24 10.9 0.0 1.0 1 0 0 1 1 1 0 Inositol monophosphatase family MSC PF09402.10 NODE_77054_length_205_cov_1.088235_g69113_i0forward_frame_1 - 0.82 9.1 3.9 0.83 9.0 3.9 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain UCR_UQCRX_QCR9 PF05365.12 NODE_77049_length_205_cov_1.141176_g69108_i0forward_frame_1 - 0.15 12.0 1.0 0.25 11.3 1.0 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like UPF0565 PF10561.9 NODE_77041_length_205_cov_1.170588_g69100_i0reverse_frame_1 - 0.025 13.8 0.1 0.025 13.8 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Reprolysin PF01421.19 NODE_77037_length_205_cov_1.176471_g69096_i0reverse_frame_1 - 0.12 12.2 0.1 0.13 12.2 0.1 1.0 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease HEAT PF02985.22 NODE_77036_length_205_cov_1.176471_g69095_i0reverse_frame_1 - 0.05 13.9 0.0 0.071 13.4 0.0 1.3 1 0 0 1 1 1 0 HEAT repeat Ribosomal_L20 PF00453.18 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.0019 18.3 0.5 0.0021 18.1 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L20 DUF4168 PF13767.6 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.0027 18.8 1.1 0.0033 18.6 1.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4168) Hemocyanin_M PF00372.19 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.036 13.2 0.8 0.04 13.1 0.8 1.0 1 0 0 1 1 1 0 Hemocyanin, copper containing domain GCS PF03074.16 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.044 13.2 1.8 0.047 13.1 1.8 1.0 1 0 0 1 1 1 0 Glutamate-cysteine ligase Tox-REase-3 PF15647.6 NODE_77032_length_205_cov_1.223529_g69091_i0reverse_frame_1 - 0.048 13.9 0.6 0.057 13.7 0.6 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 3 zf-C2HC_2 PF13913.6 NODE_77027_length_205_cov_1.276471_g69086_i0reverse_frame_1 - 5.1e-08 32.6 0.6 1.5e-07 31.1 0.1 1.9 2 0 0 2 2 2 1 zinc-finger of a C2HC-type zinc_ribbon_4 PF13717.6 NODE_77027_length_205_cov_1.276471_g69086_i0reverse_frame_1 - 0.03 14.2 0.4 0.068 13.1 0.0 1.7 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2_4 PF13894.6 NODE_77027_length_205_cov_1.276471_g69086_i0reverse_frame_1 - 0.048 14.5 0.8 0.41 11.6 0.4 2.1 1 1 1 2 2 2 0 C2H2-type zinc finger Nbl1_Borealin_N PF10444.9 NODE_77027_length_205_cov_1.276471_g69086_i0reverse_frame_1 - 0.082 12.6 0.1 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal C1_2 PF03107.16 NODE_77025_length_205_cov_1.288235_g69084_i0reverse_frame_1 - 0.22 11.9 4.1 10 6.5 1.5 2.2 2 1 0 2 2 2 0 C1 domain DNA_pol3_a_NI PF14480.6 NODE_77024_length_205_cov_1.300000_g69083_i0reverse_frame_1 - 0.037 14.0 2.3 0.76 9.8 0.7 2.3 1 1 1 2 2 2 0 DNA polymerase III polC-type N-terminus I TPR_MalT PF17874.1 NODE_77022_length_205_cov_1.305882_g69081_i0forward_frame_1 - 0.15 11.4 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 MalT-like TPR region APS_kinase PF01583.20 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 6.7e-07 29.3 0.1 8.6e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_18 PF13238.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.00013 22.5 0.1 0.00017 22.2 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.0025 18.2 0.0 0.0025 18.2 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.0058 16.8 0.0 0.007 16.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.01 15.1 0.0 0.011 15.0 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.016 15.5 0.2 0.021 15.1 0.2 1.2 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.018 15.4 0.0 0.025 15.0 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Thymidylate_kin PF02223.17 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.018 14.7 0.2 0.024 14.3 0.2 1.2 1 0 0 1 1 1 0 Thymidylate kinase AAA_24 PF13479.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.029 14.1 0.1 0.034 13.9 0.1 1.1 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.031 14.2 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 RsgA GTPase AAA_17 PF13207.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.032 14.7 0.1 0.043 14.3 0.1 1.2 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.033 14.7 0.1 0.039 14.5 0.1 1.1 1 0 0 1 1 1 0 ABC transporter PRK PF00485.18 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.046 13.4 0.0 0.061 13.1 0.0 1.1 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NTPase_1 PF03266.15 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.074 13.0 0.2 0.087 12.7 0.2 1.1 1 0 0 1 1 1 0 NTPase NB-ARC PF00931.22 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.085 12.0 0.0 0.098 11.8 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_28 PF13521.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.097 12.9 0.5 0.12 12.6 0.5 1.1 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.12 12.2 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Arf PF00025.21 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.12 11.8 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosylation factor family TsaE PF02367.17 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.13 12.3 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_5 PF07728.14 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.14 12.2 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Herpes_Helicase PF02689.14 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.17 9.8 0.1 0.16 9.8 0.1 1.0 1 0 0 1 1 1 0 Helicase DUF3865 PF12981.7 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.19 11.6 0.0 0.22 11.4 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3865) AAA_30 PF13604.6 NODE_77017_length_205_cov_1.329412_g69076_i0reverse_frame_1 - 0.2 11.4 0.1 0.22 11.2 0.1 1.1 1 0 0 1 1 1 0 AAA domain FeS_assembly_P PF01883.19 NODE_77014_length_205_cov_1.341176_g69073_i0reverse_frame_1 - 0.16 12.2 0.2 0.24 11.6 0.2 1.2 1 0 0 1 1 1 0 Iron-sulfur cluster assembly protein DUF1247 PF06851.11 NODE_77007_length_205_cov_1.376471_g69066_i0reverse_frame_1 - 0.096 12.6 0.3 0.11 12.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) ArAE_1_C PF11728.8 NODE_77005_length_205_cov_1.388235_g69064_i0forward_frame_1 - 0.099 12.6 0.3 0.13 12.3 0.3 1.0 1 0 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain NuDC PF16273.5 NODE_77002_length_205_cov_1.394118_g69061_i0forward_frame_1 - 0.052 14.1 4.9 0.085 13.4 4.9 1.4 1 1 0 1 1 1 0 Nuclear distribution C domain Cyt_bd_oxida_II PF02322.15 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.0057 16.1 0.8 0.0064 15.9 0.8 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II 4HB_MCP_1 PF12729.7 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.028 14.0 0.3 0.035 13.6 0.3 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction SUR7 PF06687.12 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.036 13.7 3.0 0.037 13.6 3.0 1.0 1 0 0 1 1 1 0 SUR7/PalI family TMEM141 PF15110.6 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.04 14.5 0.9 0.046 14.3 0.9 1.1 1 0 0 1 1 1 0 TMEM141 protein family Shisa PF13908.6 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 0.5 10.6 3.2 0.37 11.0 2.1 1.4 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator Orf78 PF06024.12 NODE_76986_length_205_cov_1.405882_g69045_i0reverse_frame_1 - 1.5 9.2 7.8 0.13 12.6 2.7 1.7 1 1 1 2 2 2 0 Orf78 (ac78) DEP PF00610.21 NODE_76985_length_205_cov_1.411765_g69044_i0reverse_frame_1 - 0.17 11.9 0.1 0.19 11.8 0.1 1.3 1 0 0 1 1 1 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) Peroxin-22 PF12827.7 NODE_76980_length_205_cov_1.411765_g69039_i0forward_frame_1 - 0.033 14.1 0.2 0.038 13.9 0.2 1.1 1 0 0 1 1 1 0 Peroxisomal biogenesis protein family DoxX PF07681.12 NODE_76974_length_205_cov_1.411765_g69033_i0reverse_frame_1 - 0.0008 20.0 0.2 0.00087 19.8 0.2 1.1 1 0 0 1 1 1 1 DoxX TSKS PF15358.6 NODE_76964_length_205_cov_1.476471_g69023_i0reverse_frame_1 - 0.032 12.6 0.0 0.033 12.6 0.0 1.0 1 0 0 1 1 1 0 Testis-specific serine kinase substrate UPF0254 PF06787.11 NODE_76964_length_205_cov_1.476471_g69023_i0reverse_frame_1 - 0.048 13.4 0.0 0.055 13.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) LIN52 PF10044.9 NODE_76964_length_205_cov_1.476471_g69023_i0reverse_frame_1 - 0.061 14.0 0.0 0.061 14.0 0.0 1.1 1 0 0 1 1 1 0 Retinal tissue protein Fe_hyd_SSU PF02256.17 NODE_76964_length_205_cov_1.476471_g69023_i0reverse_frame_1 - 0.11 12.6 0.3 0.17 12.0 0.3 1.5 1 1 0 1 1 1 0 Iron hydrogenase small subunit DUF5075 PF16825.5 NODE_76953_length_205_cov_1.517647_g69012_i0reverse_frame_1 - 0.028 14.1 0.1 0.029 14.1 0.1 1.2 1 0 0 1 1 1 0 IGP family C-type lectin domain TTL PF03133.15 NODE_76952_length_205_cov_1.523529_g69011_i0reverse_frame_1 - 1.1e-05 24.8 0.0 1.2e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family SLT PF01464.20 NODE_76951_length_205_cov_1.529412_g69010_i0forward_frame_1 - 0.15 11.7 0.1 0.18 11.4 0.1 1.1 1 0 0 1 1 1 0 Transglycosylase SLT domain DUF4722 PF15849.5 NODE_76948_length_205_cov_1.547059_g69007_i0reverse_frame_1 - 0.16 11.7 0.4 0.22 11.2 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4722) CYSTM PF12734.7 NODE_76948_length_205_cov_1.547059_g69007_i0forward_frame_1 - 3.5 8.0 14.5 4.7 7.6 14.5 1.4 1 1 0 1 1 1 0 Cysteine-rich TM module stress tolerance DUF3438 PF11920.8 NODE_76947_length_205_cov_1.552941_g69006_i0forward_frame_1 - 0.13 11.5 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) DUF3464 PF11947.8 NODE_76935_length_205_cov_1.611765_g68994_i0forward_frame_1 - 7.3 6.3 6.2 7.5 6.3 6.2 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Spem1 PF15670.5 NODE_76935_length_205_cov_1.611765_g68994_i0forward_frame_1 - 8.9 5.8 17.4 8.8 5.8 17.4 1.1 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF1320 PF07030.12 NODE_76917_length_205_cov_1.805882_g68976_i0forward_frame_1 - 0.11 12.6 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1320) Ndc1_Nup PF09531.10 NODE_76916_length_205_cov_1.805882_g68975_i0reverse_frame_1 - 0.53 8.9 5.6 0.57 8.8 5.6 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup GLYCAM-1 PF05242.11 NODE_76913_length_205_cov_1.823529_g68972_i0reverse_frame_1 - 0.028 14.6 1.8 0.03 14.4 1.8 1.1 1 0 0 1 1 1 0 Glycosylation-dependent cell adhesion molecule 1 (GlyCAM-1) GASA PF02704.14 NODE_76913_length_205_cov_1.823529_g68972_i0forward_frame_1 - 3.7 7.8 8.8 15 5.8 4.0 2.2 2 0 0 2 2 2 0 Gibberellin regulated protein GerPB PF10803.8 NODE_76909_length_205_cov_1.876471_g68968_i0forward_frame_1 - 0.041 14.0 2.8 0.052 13.6 2.8 1.4 1 0 0 1 1 1 0 Spore germination GerPB zf-C2HE PF16278.5 NODE_76907_length_205_cov_1.882353_g68966_i0reverse_frame_1 - 0.04 14.4 0.2 0.054 14.0 0.2 1.3 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger DUF2207 PF09972.9 NODE_76907_length_205_cov_1.882353_g68966_i0forward_frame_1 - 5.2 5.7 4.7 5.5 5.6 4.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DivIC PF04977.15 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.0032 17.2 11.7 0.033 14.0 2.3 2.1 1 1 1 2 2 2 2 Septum formation initiator bZIP_1 PF00170.21 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.0055 16.8 3.0 0.0055 16.8 3.0 1.8 1 1 1 2 2 2 2 bZIP transcription factor bZIP_2 PF07716.15 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.013 15.6 1.1 0.013 15.6 1.1 2.0 1 1 2 3 3 3 0 Basic region leucine zipper HALZ PF02183.18 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.02 15.1 3.2 0.02 15.1 3.2 2.1 2 0 0 2 2 2 0 Homeobox associated leucine zipper Csm1_N PF18504.1 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.043 14.2 8.8 0.037 14.4 6.8 1.8 1 1 1 2 2 2 0 Csm1 N-terminal domain RTBV_P46 PF06216.11 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.085 11.7 0.7 0.076 11.9 0.7 1.0 1 0 0 1 1 1 0 Rice tungro bacilliform virus P46 protein JAKMIP_CC3 PF16034.5 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.12 12.4 8.8 0.12 12.3 8.8 1.0 1 0 0 1 1 1 0 JAKMIP CC3 domain DUF3450 PF11932.8 NODE_76897_length_205_cov_2.011765_g68956_i0forward_frame_1 - 0.51 9.6 8.5 0.51 9.6 8.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) U71 PF17474.2 NODE_76896_length_205_cov_2.017647_g68955_i0reverse_frame_1 - 0.066 13.2 0.4 0.11 12.5 0.4 1.3 1 0 0 1 1 1 0 Tegument protein UL11 homolog Bac_rhamnosid_C PF17390.2 NODE_76896_length_205_cov_2.017647_g68955_i0forward_frame_1 - 0.15 11.9 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase C-terminal domain Pex24p PF06398.11 NODE_76892_length_205_cov_2.076471_g68951_i0reverse_frame_1 - 0.05 12.6 1.4 0.051 12.6 1.4 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2079 PF09852.9 NODE_76891_length_205_cov_2.076471_g68950_i0reverse_frame_1 - 0.081 11.8 1.4 0.082 11.7 1.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) DUF45 PF01863.17 NODE_76889_length_205_cov_2.094118_g68948_i0reverse_frame_1 - 0.2 11.7 0.1 0.24 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF45 DUF1378 PF07125.11 NODE_76889_length_205_cov_2.094118_g68948_i0forward_frame_1 - 0.063 13.4 0.4 0.11 12.7 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1378) DZR PF12773.7 NODE_76888_length_205_cov_2.100000_g68947_i0reverse_frame_1 - 0.044 13.8 1.8 0.12 12.4 1.8 1.7 1 1 0 1 1 1 0 Double zinc ribbon Nudix_N_2 PF14803.6 NODE_76888_length_205_cov_2.100000_g68947_i0reverse_frame_1 - 0.25 11.3 5.3 3.6 7.6 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal GATA PF00320.27 NODE_76888_length_205_cov_2.100000_g68947_i0reverse_frame_1 - 1.1 8.9 6.6 0.31 10.7 0.8 2.6 3 0 0 3 3 3 0 GATA zinc finger PhrC_PhrF PF11131.8 NODE_76886_length_205_cov_2.111765_g68945_i0reverse_frame_1 - 0.13 11.9 0.4 0.13 11.9 0.4 1.6 2 0 0 2 2 2 0 Rap-phr extracellular signalling Hormone_6 PF00236.18 NODE_76868_length_205_cov_2.511765_g68927_i0reverse_frame_1 - 0.014 15.4 0.5 0.015 15.3 0.5 1.2 1 0 0 1 1 1 0 Glycoprotein hormone Pacifastin_I PF05375.13 NODE_76867_length_205_cov_2.511765_g68926_i0reverse_frame_1 - 1.2 8.9 8.6 3.2 7.5 1.2 2.4 2 1 0 2 2 2 0 Pacifastin inhibitor (LCMII) DUF2569 PF10754.9 NODE_76854_length_205_cov_2.935294_g68913_i0forward_frame_1 - 0.042 14.3 1.6 0.046 14.2 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) DUF3975 PF13126.6 NODE_76850_length_205_cov_3.082353_g68909_i0reverse_frame_1 - 0.022 15.2 1.2 0.027 14.9 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) GAPT PF11770.8 NODE_76850_length_205_cov_3.082353_g68909_i0reverse_frame_1 - 0.31 10.9 1.5 0.32 10.8 1.5 1.1 1 0 0 1 1 1 0 GRB2-binding adapter (GAPT) DUF3989 PF13150.6 NODE_76844_length_205_cov_3.605882_g68903_i0reverse_frame_1 - 0.083 12.6 0.8 0.099 12.4 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) Nucleo_P87 PF07267.11 NODE_76842_length_205_cov_4.541176_g68901_i0reverse_frame_1 - 0.39 9.5 0.8 0.43 9.4 0.8 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Histone_HNS PF00816.21 NODE_76834_length_205_cov_19.652941_g68893_i0forward_frame_1 - 0.18 12.6 0.4 0.19 12.6 0.4 1.2 1 0 0 1 1 1 0 H-NS histone family PgaD PF13994.6 NODE_76832_length_205_cov_23.417647_g68891_i0forward_frame_1 - 0.1 12.6 1.4 0.11 12.5 1.4 1.0 1 0 0 1 1 1 0 PgaD-like protein EF-hand_13 PF17958.1 NODE_76830_length_205_cov_26.658824_g68889_i0reverse_frame_1 - 0.04 13.7 0.1 0.055 13.3 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain Tombus_P33 PF08500.10 NODE_76825_length_205_cov_36.264706_g68884_i0reverse_frame_1 - 0.091 12.7 0.6 0.17 11.8 0.1 1.7 1 1 1 2 2 2 0 Tombusvirus p33 YjeJ PF15922.5 NODE_76824_length_205_cov_36.782353_g68883_i0forward_frame_1 - 0.059 12.6 0.1 1.3 8.2 0.1 2.0 1 1 1 2 2 2 0 YjeJ-like DUF2628 PF10947.8 NODE_76823_length_205_cov_36.935294_g68882_i0reverse_frame_1 - 0.37 11.2 3.3 0.47 10.8 3.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Pannexin_like PF12534.8 NODE_76820_length_205_cov_38.511765_g68879_i0reverse_frame_1 - 0.053 12.6 0.6 0.064 12.3 0.6 1.0 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 Myco_arth_vir_N PF09610.10 NODE_76819_length_205_cov_38.770588_g68878_i0forward_frame_1 - 5.7 7.1 9.7 8.7 6.5 9.7 1.3 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) Curto_V2 PF07325.11 NODE_76818_length_205_cov_39.058824_g68877_i0reverse_frame_1 - 0.026 14.4 0.3 0.027 14.4 0.3 1.1 1 0 0 1 1 1 0 Curtovirus V2 protein Orthoreo_P17 PF07272.11 NODE_76818_length_205_cov_39.058824_g68877_i0reverse_frame_1 - 0.11 12.5 0.1 0.12 12.4 0.1 1.0 1 0 0 1 1 1 0 Orthoreovirus P17 protein rhaM PF05336.13 NODE_76816_length_205_cov_42.341176_g68875_i0reverse_frame_1 - 0.0057 16.7 0.8 0.0066 16.5 0.8 1.3 1 1 0 1 1 1 1 L-rhamnose mutarotase UL17 PF17640.2 NODE_76813_length_205_cov_43.729412_g68872_i0reverse_frame_1 - 0.097 12.7 0.0 0.11 12.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized UL17 zf-C2HC5 PF06221.13 NODE_76810_length_205_cov_47.141176_g68869_i0forward_frame_1 - 0.0071 16.3 1.5 0.0097 15.9 1.5 1.2 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type zinc_ribbon_12 PF11331.8 NODE_76809_length_205_cov_47.794118_g68868_i0forward_frame_1 - 0.0069 16.2 0.2 0.01 15.6 0.2 1.3 1 0 0 1 1 1 1 Probable zinc-ribbon domain zf-CW PF07496.15 NODE_76809_length_205_cov_47.794118_g68868_i0forward_frame_1 - 0.025 14.6 0.7 0.036 14.1 0.7 1.3 1 0 0 1 1 1 0 CW-type Zinc Finger DUF5538 PF17692.1 NODE_76789_length_205_cov_89.788235_g68848_i0reverse_frame_1 - 0.011 15.7 0.1 0.012 15.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5538) zf-MYST PF17772.1 NODE_76784_length_205_cov_95.964706_g68843_i0reverse_frame_1 - 0.045 13.4 1.4 0.066 12.8 0.5 1.7 2 0 0 2 2 2 0 MYST family zinc finger domain Collagen PF01391.18 NODE_76768_length_205_cov_228.005882_g68827_i0forward_frame_1 - 0.05 13.4 0.1 0.099 12.4 0.1 1.4 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) NS3_envE PF02723.14 NODE_76765_length_205_cov_250.147059_g68824_i0reverse_frame_1 - 0.014 15.5 4.4 0.018 15.1 4.4 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E SRTM1 PF15872.5 NODE_76765_length_205_cov_250.147059_g68824_i0reverse_frame_1 - 0.023 14.8 1.5 0.03 14.4 1.5 1.2 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 Adipogenin PF15202.6 NODE_76765_length_205_cov_250.147059_g68824_i0reverse_frame_1 - 1.9 8.5 6.9 1.9 8.6 6.9 1.2 1 0 0 1 1 1 0 Adipogenin MAP17 PF15807.5 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_1 - 1.6 9.0 5.7 1.9 8.7 5.7 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Peptidase_S49_N PF08496.10 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_1 - 2.1 8.4 7.6 2.3 8.3 7.6 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Cytochrome-c551 PF10643.9 NODE_76763_length_205_cov_315.900000_g68822_i0forward_frame_1 - 0.51 9.9 3.5 0.57 9.7 3.5 1.0 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 Epiglycanin_C PF14654.6 NODE_76755_length_206_cov_0.830409_g68814_i0forward_frame_1 - 0.078 13.0 0.3 0.081 13.0 0.3 1.2 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region TMEMspv1-c74-12 PF11044.8 NODE_76754_length_206_cov_0.865497_g68813_i0reverse_frame_1 - 0.029 14.3 0.8 0.029 14.3 0.8 1.7 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein PTCB-BRCT PF12738.7 NODE_76749_length_206_cov_0.929825_g68808_i0reverse_frame_1 - 0.16 11.9 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 twin BRCT domain PsaM PF07465.13 NODE_76748_length_206_cov_0.929825_g68807_i0forward_frame_1 - 0.022 14.5 0.5 0.028 14.1 0.5 1.2 1 0 0 1 1 1 0 Photosystem I protein M (PsaM) SR-25 PF10500.9 NODE_76741_length_206_cov_0.935673_g68800_i0forward_frame_1 - 1.4 8.5 9.2 1.4 8.5 9.2 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Umbravirus_LDM PF04817.12 NODE_76737_length_206_cov_0.935673_g68796_i0reverse_frame_1 - 0.025 13.9 0.1 0.026 13.9 0.1 1.1 1 0 0 1 1 1 0 Umbravirus long distance movement (LDM) family DUF4246 PF14033.6 NODE_76732_length_206_cov_0.935673_g68791_i0forward_frame_1 - 0.22 10.6 0.0 0.24 10.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4246) DUF575 PF04746.12 NODE_76731_length_206_cov_0.935673_g68790_i0reverse_frame_1 - 0.028 14.7 0.6 0.035 14.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF575) DUF1360 PF07098.11 NODE_76718_length_206_cov_1.011696_g68777_i0reverse_frame_1 - 0.17 11.9 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) Ribosomal_L11_N PF03946.14 NODE_76715_length_206_cov_1.029240_g68774_i0forward_frame_1 - 0.16 11.8 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11, N-terminal domain Nas2_N PF18265.1 NODE_76712_length_206_cov_1.046784_g68771_i0forward_frame_1 - 0.17 11.8 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Nas2 N_terminal domain DUF2341 PF10102.9 NODE_76701_length_206_cov_1.087719_g68760_i0forward_frame_1 - 0.078 13.6 1.1 0.12 13.0 1.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF2341) Lustrin_cystein PF14625.6 NODE_76699_length_206_cov_1.087719_g68758_i0reverse_frame_1 - 0.58 10.6 10.1 34 4.9 10.1 2.6 1 1 0 1 1 1 0 Lustrin, cysteine-rich repeated domain KCH PF16944.5 NODE_76693_length_206_cov_1.111111_g68752_i0reverse_frame_1 - 0.012 15.4 2.7 0.013 15.3 2.7 1.1 1 0 0 1 1 1 0 Fungal potassium channel YrhC PF14143.6 NODE_76693_length_206_cov_1.111111_g68752_i0forward_frame_1 - 4.1 7.6 7.2 33 4.7 7.2 1.9 1 1 0 1 1 1 0 YrhC-like protein Use1 PF09753.9 NODE_76687_length_206_cov_1.163743_g68746_i0reverse_frame_1 - 0.15 11.8 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Membrane fusion protein Use1 IMS_C PF11799.8 NODE_76686_length_206_cov_1.163743_g68745_i0forward_frame_1 - 0.0024 18.6 0.2 0.0027 18.4 0.2 1.1 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain GYR PF02756.14 NODE_76686_length_206_cov_1.163743_g68745_i0forward_frame_1 - 0.041 13.6 0.7 0.041 13.6 0.7 2.1 2 0 0 2 2 2 0 GYR motif U3_assoc_6 PF08640.11 NODE_76686_length_206_cov_1.163743_g68745_i0forward_frame_1 - 0.13 12.3 2.8 0.52 10.4 0.3 2.0 1 1 1 2 2 2 0 U3 small nucleolar RNA-associated protein 6 FANCI_S2 PF14676.6 NODE_76684_length_206_cov_1.163743_g68743_i0reverse_frame_1 - 0.057 13.7 0.1 0.06 13.7 0.1 1.0 1 0 0 1 1 1 0 FANCI solenoid 2 Pox_TAP PF03355.14 NODE_76680_length_206_cov_1.169591_g68739_i0forward_frame_1 - 0.027 14.1 0.9 0.028 14.0 0.9 1.1 1 0 0 1 1 1 0 Viral Trans-Activator Protein CnrY PF17524.2 NODE_76673_length_206_cov_1.204678_g68732_i0reverse_frame_1 - 0.069 13.4 0.0 0.076 13.2 0.0 1.1 1 0 0 1 1 1 0 Anti-sigma factor CnrY NERD PF08378.11 NODE_76672_length_206_cov_1.204678_g68731_i0forward_frame_1 - 0.21 12.1 0.0 0.21 12.1 0.0 1.2 1 0 0 1 1 1 0 Nuclease-related domain zf-A20 PF01754.16 NODE_76667_length_206_cov_1.228070_g68726_i0forward_frame_1 - 0.019 14.9 1.8 0.048 13.6 1.8 1.7 1 0 0 1 1 1 0 A20-like zinc finger fn3_PAP PF17808.1 NODE_76660_length_206_cov_1.298246_g68719_i0reverse_frame_1 - 0.096 12.8 1.1 0.1 12.7 1.1 1.1 1 0 0 1 1 1 0 Fn3-like domain from Purple Acid Phosphatase Hus1 PF04005.12 NODE_76660_length_206_cov_1.298246_g68719_i0forward_frame_1 - 0.0052 15.9 0.1 0.0057 15.8 0.1 1.0 1 0 0 1 1 1 1 Hus1-like protein PSI_PsaJ PF01701.18 NODE_76653_length_206_cov_1.339181_g68712_i0forward_frame_1 - 0.13 12.8 0.7 0.19 12.3 0.7 1.2 1 0 0 1 1 1 0 Photosystem I reaction centre subunit IX / PsaJ DNA_methylase PF00145.17 NODE_76651_length_206_cov_1.368421_g68710_i0reverse_frame_1 - 3e-12 46.5 0.0 3.5e-12 46.3 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase TNFR_c6 PF00020.18 NODE_76648_length_206_cov_1.380117_g68707_i0forward_frame_1 - 1 9.8 8.3 2.8 8.4 8.4 1.7 1 1 0 1 1 1 0 TNFR/NGFR cysteine-rich region CHDNT PF08073.12 NODE_76645_length_206_cov_1.380117_g68704_i0forward_frame_1 - 0.057 13.4 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 CHDNT (NUC034) domain VSP PF03302.13 NODE_76638_length_206_cov_1.397661_g68697_i0reverse_frame_1 - 0.081 11.8 13.1 0.099 11.5 13.1 1.2 1 0 0 1 1 1 0 Giardia variant-specific surface protein Ephrin_rec_like PF07699.13 NODE_76638_length_206_cov_1.397661_g68697_i0reverse_frame_1 - 0.38 10.5 19.1 2.9 7.8 3.4 2.9 1 1 0 2 2 2 0 Putative ephrin-receptor like zf-UBP_var PF17807.1 NODE_76638_length_206_cov_1.397661_g68697_i0reverse_frame_1 - 0.63 9.8 0.2 0.63 9.8 0.2 2.8 1 1 2 3 3 3 0 Variant UBP zinc finger KNTase_C PF07827.11 NODE_76634_length_206_cov_1.403509_g68693_i0reverse_frame_1 - 0.14 12.0 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 KNTase C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks390.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks390.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks390.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks390.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Presenilin PF01080.17 NODE_76630_length_206_cov_1.403509_g68689_i0reverse_frame_1 - 4.9 5.8 10.4 5.2 5.7 10.4 1.0 1 0 0 1 1 1 0 Presenilin Prim_Zn_Ribbon PF08273.12 NODE_76626_length_206_cov_1.403509_g68685_i0forward_frame_1 - 7.5 6.9 16.9 0.17 12.2 5.6 2.4 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase Axin_b-cat_bind PF08833.10 NODE_76615_length_206_cov_1.508772_g68674_i0forward_frame_1 - 0.029 14.5 0.1 0.043 13.9 0.1 1.2 1 0 0 1 1 1 0 Axin beta-catenin binding domain Csm1_N PF18504.1 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.0013 19.1 3.2 0.0018 18.6 3.2 1.3 1 0 0 1 1 1 1 Csm1 N-terminal domain CCDC92 PF14916.6 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.002 17.8 1.5 0.003 17.3 0.5 1.8 1 1 1 2 2 2 1 Coiled-coil domain of unknown function Leu_zip PF15294.6 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.0087 15.6 1.9 0.0093 15.5 1.9 1.0 1 0 0 1 1 1 1 Leucine zipper Lebercilin PF15619.6 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.025 14.2 4.2 0.039 13.6 4.2 1.3 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease Pentaxin PF00354.17 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.035 13.8 0.6 0.037 13.7 0.6 1.0 1 0 0 1 1 1 0 Pentaxin family DivIC PF04977.15 NODE_76613_length_206_cov_1.514620_g68672_i0reverse_frame_1 - 0.39 10.5 2.6 0.82 9.5 2.6 1.6 1 1 0 1 1 1 0 Septum formation initiator motB PF17613.2 NODE_76599_length_206_cov_1.584795_g68658_i0forward_frame_1 - 0.013 15.4 0.1 0.014 15.3 0.1 1.0 1 0 0 1 1 1 0 Modifier of transcription Muted PF14942.6 NODE_76599_length_206_cov_1.584795_g68658_i0forward_frame_1 - 0.024 15.0 1.2 0.024 15.0 1.2 1.0 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Colipase PF01114.18 NODE_76596_length_206_cov_1.608187_g68655_i0forward_frame_1 - 0.035 13.8 1.0 0.053 13.2 1.0 1.3 1 0 0 1 1 1 0 Colipase, N-terminal domain COX6C PF02937.15 NODE_76593_length_206_cov_1.625731_g68652_i0reverse_frame_1 - 0.15 12.3 0.1 0.28 11.3 0.1 1.6 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VIc HHH_5 PF14520.6 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 2e-17 63.5 0.3 2.3e-17 63.3 0.3 1.1 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH PF00633.23 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 1.4e-08 34.2 1.0 0.00059 19.6 0.2 2.2 2 0 0 2 2 2 2 Helix-hairpin-helix motif IMS_HHH PF11798.8 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.00034 20.8 0.1 0.0069 16.7 0.0 2.2 2 0 0 2 2 2 1 IMS family HHH motif Transposase_20 PF02371.16 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.00052 20.3 0.0 0.062 13.6 0.0 2.1 2 0 0 2 2 2 1 Transposase IS116/IS110/IS902 family HHH_3 PF12836.7 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.00086 19.5 0.2 0.37 11.1 0.0 2.2 1 1 0 2 2 2 2 Helix-hairpin-helix motif HHH_8 PF14716.6 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.0011 19.3 0.1 0.063 13.7 0.0 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.0022 18.0 0.0 1.1 9.4 0.0 2.1 1 1 1 2 2 2 2 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.0071 16.9 0.2 0.34 11.6 0.0 2.1 1 1 1 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold LcrG PF07216.12 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.052 13.5 0.1 0.076 12.9 0.0 1.3 2 0 0 2 2 2 0 LcrG protein Cdd1 PF11731.8 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_1 - 0.095 13.0 0.0 0.52 10.6 0.0 1.9 2 0 0 2 2 2 0 Pathogenicity locus Epiglycanin_C PF14654.6 NODE_76590_length_206_cov_1.637427_g68649_i0reverse_frame_1 - 0.12 12.5 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region cNMP_binding PF00027.29 NODE_76589_length_206_cov_1.637427_g68648_i0reverse_frame_1 - 0.012 15.6 0.0 0.029 14.4 0.0 1.6 1 1 1 2 2 2 0 Cyclic nucleotide-binding domain DUF3367 PF11847.8 NODE_76586_length_206_cov_1.649123_g68645_i0reverse_frame_1 - 0.15 9.9 0.1 0.17 9.7 0.1 1.0 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase DUF3864 PF12980.7 NODE_76583_length_206_cov_1.695906_g68642_i0forward_frame_1 - 0.02 15.2 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3864) Mito_morph_reg PF14972.6 NODE_76583_length_206_cov_1.695906_g68642_i0forward_frame_1 - 0.073 12.7 0.1 0.08 12.5 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator RolB_RolC PF02027.17 NODE_76579_length_206_cov_1.719298_g68638_i0forward_frame_1 - 0.043 13.5 0.0 0.047 13.3 0.0 1.0 1 0 0 1 1 1 0 RolB/RolC glucosidase family Herpes_TAF50 PF03326.13 NODE_76575_length_206_cov_1.760234_g68634_i0reverse_frame_1 - 0.21 10.2 1.1 0.25 10.0 1.1 1.0 1 0 0 1 1 1 0 Herpesvirus transcription activation factor (transactivator) LRR_12 PF18837.1 NODE_76575_length_206_cov_1.760234_g68634_i0forward_frame_1 - 0.039 13.6 0.0 0.073 12.7 0.0 1.5 1 0 0 1 1 1 0 Leucine-rich repeat APOBEC3 PF18771.1 NODE_76569_length_206_cov_1.818713_g68628_i0reverse_frame_1 - 0.016 15.3 0.9 0.018 15.2 0.9 1.1 1 0 0 1 1 1 0 APOBEC3 DUF3677 PF12432.8 NODE_76543_length_206_cov_1.906433_g68602_i0forward_frame_1 - 0.013 15.8 0.0 0.014 15.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3677) RSF PF14876.6 NODE_76539_length_206_cov_1.923977_g68598_i0reverse_frame_1 - 0.14 11.1 1.3 0.16 10.9 1.3 1.0 1 0 0 1 1 1 0 Respiratory growth transcriptional regulator Orai-1 PF07856.12 NODE_76537_length_206_cov_1.964912_g68596_i0forward_frame_1 - 0.26 10.9 4.8 0.33 10.6 4.8 1.0 1 0 0 1 1 1 0 Mediator of CRAC channel activity Fis1_TPR_N PF14852.6 NODE_76530_length_206_cov_2.029240_g68589_i0forward_frame_1 - 0.0066 16.1 1.0 0.0096 15.6 1.0 1.3 1 0 0 1 1 1 1 Fis1 N-terminal tetratricopeptide repeat FAS_meander PF17951.1 NODE_76529_length_206_cov_2.029240_g68588_i0forward_frame_1 - 0.023 14.5 0.2 0.026 14.3 0.2 1.1 1 0 0 1 1 1 0 Fatty acid synthase meander beta sheet domain BTHB PF18410.1 NODE_76529_length_206_cov_2.029240_g68588_i0forward_frame_1 - 0.026 14.3 0.9 0.033 14.0 0.9 1.2 1 0 0 1 1 1 0 Basic tilted helix bundle domain zf-C2HE PF16278.5 NODE_76525_length_206_cov_2.052632_g68584_i0reverse_frame_1 - 0.066 13.7 1.7 0.087 13.3 1.7 1.2 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger PP2C PF00481.21 NODE_76514_length_206_cov_2.146199_g68573_i0forward_frame_1 - 2.3e-09 37.3 0.0 2.6e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C TSP_1 PF00090.19 NODE_76513_length_206_cov_2.146199_g68572_i0forward_frame_1 - 0.49 10.6 5.3 0.84 9.9 5.3 1.5 1 0 0 1 1 1 0 Thrombospondin type 1 domain MOEP19 PF16005.5 NODE_76509_length_206_cov_2.187135_g68568_i0reverse_frame_1 - 0.12 12.4 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 KH-like RNA-binding domain zf-GRF PF06839.12 NODE_76502_length_206_cov_2.239766_g68561_i0forward_frame_1 - 0.089 12.9 2.0 0.12 12.5 2.0 1.2 1 0 0 1 1 1 0 GRF zinc finger SIR2 PF02146.17 NODE_76501_length_206_cov_2.263158_g68560_i0reverse_frame_1 - 6.5e-11 42.5 0.0 6.9e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 Sir2 family MlaA PF04333.13 NODE_76501_length_206_cov_2.263158_g68560_i0forward_frame_1 - 0.087 12.5 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 MlaA lipoprotein DmpG_comm PF07836.11 NODE_76501_length_206_cov_2.263158_g68560_i0forward_frame_1 - 0.11 12.1 0.1 0.18 11.3 0.1 1.4 1 0 0 1 1 1 0 DmpG-like communication domain Metallothi_Euk2 PF12809.7 NODE_76499_length_206_cov_2.286550_g68558_i0reverse_frame_1 - 0.04 14.2 0.6 0.04 14.2 0.6 1.4 2 0 0 2 2 2 0 Eukaryotic metallothionein ERGIC_N PF13850.6 NODE_76497_length_206_cov_2.298246_g68556_i0reverse_frame_1 - 0.0049 17.2 0.2 0.006 16.9 0.2 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ac110_PIF PF07280.11 NODE_76497_length_206_cov_2.298246_g68556_i0reverse_frame_1 - 1.2 9.0 7.5 7.4 6.5 4.5 2.1 2 0 0 2 2 2 0 Per os infectivity factor AC110 Glyco_transf_54 PF04666.13 NODE_76495_length_206_cov_2.304094_g68554_i0reverse_frame_1 - 0.057 12.3 1.6 0.06 12.2 1.6 1.1 1 0 0 1 1 1 0 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region UCH PF00443.29 NODE_76493_length_206_cov_2.321637_g68552_i0reverse_frame_1 - 0.00058 19.4 0.1 0.00058 19.4 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase 7tm_1 PF00001.21 NODE_76491_length_206_cov_2.339181_g68550_i0reverse_frame_1 - 0.52 9.6 6.5 0.58 9.4 6.5 1.0 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) zf-RING_2 PF13639.6 NODE_76490_length_206_cov_2.339181_g68549_i0reverse_frame_1 - 0.22 11.9 4.3 0.93 9.9 1.8 2.1 2 0 0 2 2 2 0 Ring finger domain adh_short PF00106.25 NODE_76489_length_206_cov_2.339181_g68548_i0forward_frame_1 - 5.1e-05 22.8 0.1 6.2e-05 22.5 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Eno-Rase_NADH_b PF12242.8 NODE_76489_length_206_cov_2.339181_g68548_i0forward_frame_1 - 0.0074 16.0 0.0 0.0083 15.9 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KR PF08659.10 NODE_76489_length_206_cov_2.339181_g68548_i0forward_frame_1 - 0.019 14.9 0.2 0.025 14.5 0.2 1.1 1 0 0 1 1 1 0 KR domain THF_DHG_CYH_C PF02882.19 NODE_76489_length_206_cov_2.339181_g68548_i0forward_frame_1 - 0.11 11.8 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Ole-e-6 PF09253.10 NODE_76485_length_206_cov_2.385965_g68544_i0reverse_frame_1 - 0.058 13.4 0.4 0.27 11.2 0.1 2.0 2 0 0 2 2 2 0 Pollen allergen ole e 6 zf-H2C2_2 PF13465.6 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 3.6e-13 49.3 8.8 8.7e-09 35.4 0.3 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 5.1e-08 32.9 10.4 0.00092 19.5 1.9 2.7 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 1.7e-07 31.5 10.8 0.0025 18.5 0.1 3.1 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 1.5e-06 28.0 7.6 0.0058 16.6 0.0 2.9 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 5.6e-05 23.3 4.9 0.003 17.8 0.5 2.6 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.0002 21.0 1.7 0.26 11.1 0.0 2.5 3 0 0 3 3 3 2 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.0087 16.3 1.0 0.0093 16.2 1.0 1.1 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-C2HE PF16278.5 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.022 15.2 6.4 0.39 11.2 1.4 2.3 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger FYDLN_acid PF09538.10 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.033 14.9 1.2 1.5 9.6 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (FYDLN_acid) TRAF6_Z2 PF18048.1 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.084 13.0 7.0 0.23 11.6 1.9 2.5 2 0 0 2 2 2 0 TNF receptor-associated factor 6 zinc finger 2 zf-C2H2_2 PF12756.7 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.1 12.9 2.7 4.7 7.6 0.1 2.1 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-Di19 PF05605.12 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.11 12.7 7.7 0.042 14.1 5.2 1.5 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-LYAR PF08790.11 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 0.12 12.3 1.3 3.3 7.7 0.3 2.3 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger DUF2072 PF09845.9 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 1.2 9.4 4.2 0.86 9.9 0.8 1.9 2 0 0 2 2 2 0 Zn-ribbon containing protein zf_UBZ PF18439.1 NODE_76484_length_206_cov_2.403509_g68543_i0reverse_frame_1 - 3.2 7.4 9.6 6.7 6.4 0.8 2.7 2 1 0 2 2 2 0 Ubiquitin-Binding Zinc Finger DAP_epimerase PF01678.19 NODE_76481_length_206_cov_2.456140_g68540_i0forward_frame_1 - 0.095 12.9 0.3 0.099 12.8 0.3 1.1 1 0 0 1 1 1 0 Diaminopimelate epimerase Birna_VP5 PF03042.14 NODE_76478_length_206_cov_2.497076_g68537_i0reverse_frame_1 - 0.079 13.0 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 Birnavirus VP5 protein DUF5320 PF17253.2 NODE_76473_length_206_cov_2.538012_g68532_i0forward_frame_1 - 2 9.6 7.7 2.4 9.3 7.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5320) GnHR_trans PF12369.8 NODE_76464_length_206_cov_2.695906_g68523_i0forward_frame_1 - 0.023 15.5 0.4 0.03 15.1 0.4 1.1 1 0 0 1 1 1 0 Gonadotropin hormone receptor transmembrane region UCH PF00443.29 NODE_76449_length_206_cov_3.274854_g68508_i0reverse_frame_1 - 8.9e-06 25.4 0.1 1.2e-05 24.9 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF640 PF04852.12 NODE_76449_length_206_cov_3.274854_g68508_i0reverse_frame_1 - 0.056 13.6 0.0 0.058 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF640) AAA_6 PF12774.7 NODE_76444_length_206_cov_3.549708_g68503_i0forward_frame_1 - 0.018 14.0 0.3 0.02 13.9 0.3 1.0 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region MOZ_SAS PF01853.18 NODE_76441_length_206_cov_3.771930_g68500_i0forward_frame_1 - 0.044 13.4 1.7 0.067 12.8 1.7 1.2 1 1 0 1 1 1 0 MOZ/SAS family TraC_F_IV PF11130.8 NODE_76429_length_206_cov_15.824561_g68488_i0forward_frame_1 - 0.13 11.8 0.1 0.14 11.8 0.1 1.0 1 0 0 1 1 1 0 F pilus assembly Type-IV secretion system for plasmid transfer HypA PF01155.19 NODE_76427_length_206_cov_19.222222_g68486_i0forward_frame_1 - 0.015 15.4 0.2 0.016 15.2 0.2 1.0 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PAPA-1 PF04795.12 NODE_76426_length_206_cov_20.602339_g68485_i0reverse_frame_1 - 0.033 15.0 5.8 0.043 14.6 5.8 1.2 1 0 0 1 1 1 0 PAPA-1-like conserved region Ac76 PF05814.11 NODE_76423_length_206_cov_22.795322_g68482_i0reverse_frame_1 - 0.35 10.9 6.8 0.43 10.6 6.8 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) Peptidase_S49_N PF08496.10 NODE_76417_length_206_cov_32.421053_g68476_i0reverse_frame_1 - 0.61 10.1 8.6 0.73 9.9 8.6 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Fer2_4 PF13510.6 NODE_76412_length_206_cov_35.941520_g68471_i0reverse_frame_1 - 0.018 15.1 1.9 0.021 14.8 1.9 1.1 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain IQ PF00612.27 NODE_76400_length_206_cov_46.134503_g68459_i0reverse_frame_1 - 0.01 15.5 1.1 0.01 15.5 1.1 2.1 2 0 0 2 2 2 0 IQ calmodulin-binding motif BRE1 PF08647.11 NODE_76389_length_206_cov_62.625731_g68448_i0reverse_frame_1 - 0.0081 16.2 0.1 0.01 15.9 0.1 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase PEMT PF04191.13 NODE_76382_length_206_cov_83.461988_g68441_i0reverse_frame_1 - 0.21 12.0 0.0 0.25 11.8 0.0 1.1 1 0 0 1 1 1 0 Phospholipid methyltransferase DOT1 PF08123.13 NODE_76373_length_206_cov_152.596491_g68432_i0forward_frame_1 - 0.066 12.7 0.1 0.073 12.6 0.1 1.0 1 0 0 1 1 1 0 Histone methylation protein DOT1 DUF3784 PF12650.7 NODE_76371_length_206_cov_162.988304_g68430_i0forward_frame_1 - 0.16 12.2 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3784) Peptidase_S49_N PF08496.10 NODE_76365_length_206_cov_303.584795_g68424_i0forward_frame_1 - 2.2 8.3 10.2 2.2 8.3 10.2 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal YMF19 PF02326.15 NODE_76360_length_206_cov_424.210526_g68419_i0forward_frame_1 - 0.027 15.2 0.2 0.034 14.9 0.2 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 zf-C6H2 PF15801.5 NODE_76356_length_206_cov_25948.286550_g68415_i0forward_frame_1 - 0.026 14.8 0.5 0.036 14.4 0.5 1.2 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding Otopetrin PF03189.13 NODE_76356_length_206_cov_25948.286550_g68415_i0forward_frame_1 - 0.058 12.2 0.0 0.058 12.2 0.0 1.0 1 0 0 1 1 1 0 Otopetrin ubiquitin PF00240.23 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 4.1e-27 93.7 0.3 5.6e-27 93.3 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 1.1e-11 44.4 0.3 1.4e-11 44.0 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 9.3e-06 26.0 0.1 4.7e-05 23.8 0.1 1.9 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 0.0015 18.5 0.0 0.0016 18.3 0.0 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 0.0064 16.6 0.0 0.012 15.7 0.0 1.5 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 0.0068 16.7 0.0 0.0077 16.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 NODE_76354_length_206_cov_62889.040936_g68413_i0reverse_frame_1 - 0.051 14.1 0.0 0.059 13.9 0.0 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Fumarate_red_D PF02313.17 NODE_76351_length_207_cov_0.750000_g68410_i0reverse_frame_1 - 0.0037 17.3 0.3 0.0043 17.1 0.3 1.1 1 0 0 1 1 1 1 Fumarate reductase subunit D Folliculin PF11704.8 NODE_76345_length_207_cov_0.906977_g68404_i0reverse_frame_1 - 0.061 13.2 0.0 0.064 13.1 0.0 1.0 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport Peptidase_U4 PF03419.13 NODE_76345_length_207_cov_0.906977_g68404_i0forward_frame_1 - 0.45 9.7 4.5 0.48 9.7 4.5 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA AF-4 PF05110.13 NODE_76340_length_207_cov_0.924419_g68399_i0reverse_frame_1 - 3.4 5.6 16.6 3.4 5.7 16.6 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein SR-25 PF10500.9 NODE_76340_length_207_cov_0.924419_g68399_i0reverse_frame_1 - 3.7 7.1 17.3 4.3 6.9 17.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Macoilin PF09726.9 NODE_76340_length_207_cov_0.924419_g68399_i0reverse_frame_1 - 9 4.7 6.5 7.7 4.9 6.5 1.0 1 0 0 1 1 1 0 Macoilin family ATP-synt_8 PF00895.20 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 0.025 15.1 4.1 0.025 15.0 0.2 2.0 2 0 0 2 2 2 0 ATP synthase protein 8 TMEM156 PF15106.6 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 0.41 10.1 6.3 0.44 10.0 6.3 1.1 1 0 0 1 1 1 0 TMEM156 protein family DUF3043 PF11241.8 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 0.42 10.6 1.2 0.42 10.6 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) EphA2_TM PF14575.6 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 0.68 10.8 5.3 0.13 13.1 1.1 1.8 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF2207 PF09972.9 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 2.1 7.0 4.2 2.2 7.0 4.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) ODV-E18 PF10717.9 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 5.6 6.9 7.0 3.4 7.6 5.2 1.6 1 1 1 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 AC_N PF16214.5 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_1 - 7.1 5.6 7.8 7.7 5.5 7.8 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Laminin_N PF00055.17 NODE_76333_length_207_cov_0.930233_g68392_i0forward_frame_1 - 0.028 14.0 0.6 0.034 13.7 0.6 1.0 1 0 0 1 1 1 0 Laminin N-terminal (Domain VI) Antimicrobial23 PF16048.5 NODE_76330_length_207_cov_0.930233_g68389_i0reverse_frame_1 - 0.096 12.4 0.4 0.19 11.4 0.4 1.5 1 0 0 1 1 1 0 Frog antimicrobial peptide DUF3040 PF11239.8 NODE_76325_length_207_cov_0.930233_g68384_i0reverse_frame_1 - 2.9 8.2 12.8 3.5 8.0 12.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF397 PF04149.12 NODE_76321_length_207_cov_0.930233_g68380_i0reverse_frame_1 - 0.097 12.8 2.4 0.49 10.5 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF397) Glyco_hydro_16 PF00722.21 NODE_76318_length_207_cov_0.930233_g68377_i0forward_frame_1 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 16 DUF3915 PF13054.6 NODE_76316_length_207_cov_0.947674_g68375_i0reverse_frame_1 - 0.065 13.2 0.5 0.067 13.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF4337 PF14235.6 NODE_76316_length_207_cov_0.947674_g68375_i0reverse_frame_1 - 0.14 12.2 0.0 0.16 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) HGWP PF03578.15 NODE_76315_length_207_cov_0.959302_g68374_i0reverse_frame_1 - 0.03 13.8 0.0 0.048 13.2 0.0 1.3 1 0 0 1 1 1 0 HGWP repeat ChapFlgA_N PF17656.1 NODE_76301_length_207_cov_1.081395_g68360_i0forward_frame_1 - 0.047 13.8 0.8 0.066 13.4 0.8 1.2 1 0 0 1 1 1 0 FlgA N-terminal domain UL16 PF17622.2 NODE_76296_length_207_cov_1.110465_g68355_i0forward_frame_1 - 0.039 13.6 0.1 0.042 13.5 0.1 1.1 1 0 0 1 1 1 0 Viral unique long protein 16 zf-RING_4 PF14570.6 NODE_76290_length_207_cov_1.156977_g68349_i0reverse_frame_1 - 0.15 11.8 1.6 0.21 11.4 1.6 1.1 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Stanniocalcin PF03298.13 NODE_76287_length_207_cov_1.162791_g68346_i0forward_frame_1 - 0.073 12.4 0.1 0.073 12.4 0.1 1.1 1 0 0 1 1 1 0 Stanniocalcin family DUF5087 PF17006.5 NODE_76286_length_207_cov_1.162791_g68345_i0forward_frame_1 - 0.012 15.1 0.8 0.012 15.1 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5087) PMT_4TMC PF16192.5 NODE_76286_length_207_cov_1.162791_g68345_i0forward_frame_1 - 0.051 13.2 0.3 0.055 13.1 0.3 1.1 1 0 0 1 1 1 0 C-terminal four TMM region of protein-O-mannosyltransferase Pkinase PF00069.25 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 1.3e-24 87.0 0.0 1.4e-24 86.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 1e-09 38.1 0.0 1.1e-09 38.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 4.6e-05 22.4 0.0 5e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 0.0031 16.9 0.0 0.0035 16.7 0.0 1.0 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_1 - 0.23 11.4 0.0 0.29 11.0 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family YWFCY PF14293.6 NODE_76274_length_207_cov_1.244186_g68333_i0forward_frame_1 - 0.2 12.0 6.8 4.7 7.6 0.1 2.2 1 1 1 2 2 2 0 YWFCY protein PQ-loop PF04193.14 NODE_76267_length_207_cov_1.261628_g68326_i0forward_frame_1 - 0.12 12.1 0.9 0.55 10.1 0.1 1.9 2 0 0 2 2 2 0 PQ loop repeat zf-MIZ PF02891.20 NODE_76256_length_207_cov_1.343023_g68315_i0reverse_frame_1 - 0.0034 17.1 0.6 0.0048 16.6 0.6 1.3 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger LRR_6 PF13516.6 NODE_76255_length_207_cov_1.354651_g68314_i0reverse_frame_1 - 1.5e-07 30.9 0.7 0.0038 17.2 0.0 2.6 3 0 0 3 3 3 2 Leucine Rich repeat LRR_1 PF00560.33 NODE_76255_length_207_cov_1.354651_g68314_i0reverse_frame_1 - 0.072 13.7 2.1 2.3 9.1 0.1 2.5 3 0 0 3 3 3 0 Leucine Rich Repeat UNC-50 PF05216.13 NODE_76255_length_207_cov_1.354651_g68314_i0forward_frame_1 - 0.27 10.8 4.4 0.3 10.6 4.4 1.0 1 0 0 1 1 1 0 UNC-50 family Ephrin_rec_like PF07699.13 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 4.2e-05 23.2 13.2 5.6e-05 22.8 10.3 2.6 1 1 0 1 1 1 1 Putative ephrin-receptor like TNFR_c6 PF00020.18 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 0.0039 17.6 5.8 0.0041 17.5 2.1 2.6 1 1 1 2 2 2 1 TNFR/NGFR cysteine-rich region Opy2 PF09463.10 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 0.11 12.9 16.1 1.5 9.2 6.2 2.8 2 1 0 2 2 2 0 Opy2 protein DDE_Tnp_1_6 PF13751.6 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 0.11 12.8 3.7 0.14 12.4 3.7 1.3 1 0 0 1 1 1 0 Transposase DDE domain Dickkopf_N PF04706.12 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 0.13 12.8 6.7 1.4 9.5 6.7 2.5 1 1 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region EGF_Tenascin PF18720.1 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 6.6 6.9 11.0 1.1 9.4 0.6 3.1 3 2 0 3 3 3 0 Tenascin EGF domain Hormone_4 PF00220.17 NODE_76254_length_207_cov_1.366279_g68313_i0forward_frame_1 - 9.1 6.6 9.6 1.2e+02 3.1 0.2 4.8 5 0 0 5 5 5 0 Neurohypophysial hormones, N-terminal Domain IHABP4_N PF16174.5 NODE_76246_length_207_cov_1.389535_g68305_i0reverse_frame_1 - 0.12 13.0 10.2 0.12 13.0 10.2 1.0 1 0 0 1 1 1 0 Intracellular hyaluronan-binding protein 4 N-terminal V-ATPase_G PF03179.15 NODE_76243_length_207_cov_1.389535_g68302_i0reverse_frame_1 - 0.11 13.0 6.7 0.12 12.9 6.7 1.1 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF4140 PF13600.6 NODE_76243_length_207_cov_1.389535_g68302_i0reverse_frame_1 - 0.77 10.2 5.4 0.99 9.9 5.4 1.3 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Ras PF00071.22 NODE_76238_length_207_cov_1.395349_g68297_i0reverse_frame_1 - 9.8e-05 22.0 0.0 9.8e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_76238_length_207_cov_1.395349_g68297_i0reverse_frame_1 - 0.00025 21.2 0.0 0.00026 21.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase PHC2_SAM_assoc PF16616.5 NODE_76231_length_207_cov_1.395349_g68290_i0reverse_frame_1 - 0.087 13.6 2.3 0.093 13.5 2.3 1.1 1 0 0 1 1 1 0 Unstructured region on Polyhomeotic-like protein 1 and 2 Pro_racemase PF05544.11 NODE_76221_length_207_cov_1.459302_g68280_i0reverse_frame_1 - 0.2 10.7 0.5 0.23 10.5 0.5 1.0 1 0 0 1 1 1 0 Proline racemase Totivirus_coat PF05518.11 NODE_76219_length_207_cov_1.470930_g68278_i0reverse_frame_1 - 3.5 5.6 5.2 3.7 5.5 5.2 1.0 1 0 0 1 1 1 0 Totivirus coat protein Lysis_col PF02402.16 NODE_76215_length_207_cov_1.511628_g68274_i0forward_frame_1 - 0.29 10.8 1.1 0.43 10.3 0.2 1.7 2 0 0 2 2 2 0 Lysis protein SUI1 PF01253.22 NODE_76211_length_207_cov_1.529070_g68270_i0reverse_frame_1 - 0.009 16.5 0.3 0.098 13.2 0.1 2.1 2 1 0 2 2 2 1 Translation initiation factor SUI1 CENP-N PF05238.13 NODE_76211_length_207_cov_1.529070_g68270_i0reverse_frame_1 - 0.025 13.9 0.1 0.028 13.7 0.1 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like U71 PF17474.2 NODE_76202_length_207_cov_1.598837_g68261_i0reverse_frame_1 - 9.8 6.2 11.1 27 4.8 3.6 2.2 1 1 1 2 2 2 0 Tegument protein UL11 homolog TIC20 PF16166.5 NODE_76200_length_207_cov_1.616279_g68259_i0forward_frame_1 - 0.042 13.6 0.9 0.05 13.4 0.9 1.0 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like CKS PF01111.19 NODE_76195_length_207_cov_1.627907_g68254_i0forward_frame_1 - 0.15 12.4 0.6 0.23 11.7 0.6 1.6 1 1 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit zf-RING_2 PF13639.6 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.00077 19.7 7.6 0.0011 19.2 7.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.0012 19.1 7.9 0.0018 18.5 7.9 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.0022 18.0 2.3 0.0036 17.3 2.3 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.0037 17.1 7.3 0.0059 16.5 7.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.006 16.6 2.4 0.006 16.6 2.4 1.7 1 1 0 1 1 1 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.0079 15.8 5.8 0.014 15.0 5.8 1.5 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.0089 15.8 2.6 0.0089 15.8 2.6 2.1 2 0 0 2 2 2 1 RING-like zinc finger CcmH PF03918.14 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.029 13.6 0.1 0.034 13.5 0.1 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein zf-RING_5 PF14634.6 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.28 11.2 7.0 0.6 10.1 7.0 1.6 1 1 0 1 1 1 0 zinc-RING finger domain FANCL_C PF11793.8 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.63 10.3 6.9 2.1 8.6 6.9 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 NODE_76191_length_207_cov_1.633721_g68250_i0forward_frame_1 - 0.83 9.6 9.3 2 8.3 9.3 1.7 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) BTD PF09270.10 NODE_76189_length_207_cov_1.656977_g68248_i0forward_frame_1 - 0.048 13.9 1.4 0.057 13.6 1.4 1.0 1 0 0 1 1 1 0 Beta-trefoil DNA-binding domain SSXT PF05030.12 NODE_76184_length_207_cov_1.674419_g68243_i0forward_frame_1 - 0.0012 18.5 0.1 0.0014 18.2 0.1 1.1 1 0 0 1 1 1 1 SSXT protein (N-terminal region) PUF PF00806.19 NODE_76181_length_207_cov_1.709302_g68240_i0forward_frame_1 - 0.026 14.2 0.4 0.043 13.5 0.4 1.4 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat Phage_G PF02306.15 NODE_76179_length_207_cov_1.726744_g68238_i0forward_frame_1 - 0.14 11.9 1.1 6.1 6.5 0.1 2.0 1 1 1 2 2 2 0 Major spike protein (G protein) Alpha_Helical PF18489.1 NODE_76169_length_207_cov_1.767442_g68228_i0reverse_frame_1 - 0.077 13.2 0.1 0.086 13.0 0.1 1.0 1 0 0 1 1 1 0 Alpha helical domain PCSK9_C1 PF18459.1 NODE_76160_length_207_cov_1.796512_g68219_i0forward_frame_1 - 0.083 13.0 0.3 0.083 13.0 0.3 1.9 2 0 0 2 2 2 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain SlyX PF04102.12 NODE_76159_length_207_cov_1.813953_g68218_i0reverse_frame_1 - 0.014 16.0 0.6 0.016 15.8 0.6 1.2 1 0 0 1 1 1 0 SlyX HrpB7 PF09486.10 NODE_76159_length_207_cov_1.813953_g68218_i0reverse_frame_1 - 0.026 14.9 0.2 0.031 14.7 0.2 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) TPR_MLP1_2 PF07926.12 NODE_76159_length_207_cov_1.813953_g68218_i0reverse_frame_1 - 0.058 13.5 0.0 0.068 13.2 0.0 1.1 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein RabGAP-TBC PF00566.18 NODE_76158_length_207_cov_1.825581_g68217_i0reverse_frame_1 - 1.1e-14 54.6 0.0 1.3e-14 54.4 0.0 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain HEPN_SAV_6107 PF18726.1 NODE_76145_length_207_cov_1.930233_g68204_i0reverse_frame_1 - 0.18 12.3 3.9 0.22 12.1 3.9 1.1 1 0 0 1 1 1 0 SAV_6107-like HEPN Yeast-kill-tox PF09207.11 NODE_76138_length_207_cov_1.988372_g68197_i0reverse_frame_1 - 0.095 13.4 3.8 0.11 13.2 3.8 1.1 1 0 0 1 1 1 0 Yeast killer toxin PRD PF00874.20 NODE_76136_length_207_cov_2.034884_g68195_i0reverse_frame_1 - 0.039 14.2 1.8 0.33 11.3 0.6 1.9 1 1 1 2 2 2 0 PRD domain Fib_alpha PF08702.10 NODE_76131_length_207_cov_2.087209_g68190_i0reverse_frame_1 - 0.0086 16.3 3.2 0.0099 16.1 3.2 1.1 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family RNA_pol_Rpb1_3 PF04983.18 NODE_76131_length_207_cov_2.087209_g68190_i0reverse_frame_1 - 0.065 13.2 1.6 0.069 13.1 1.6 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 3 Seryl_tRNA_N PF02403.22 NODE_76131_length_207_cov_2.087209_g68190_i0reverse_frame_1 - 0.45 10.8 7.6 3.1 8.1 7.6 1.9 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain 7TMR-DISM_7TM PF07695.11 NODE_76120_length_207_cov_2.215116_g68179_i0reverse_frame_1 - 0.0097 15.8 0.1 0.01 15.7 0.1 1.1 1 0 0 1 1 1 1 7TM diverse intracellular signalling tRNA-synt_1 PF00133.22 NODE_76120_length_207_cov_2.215116_g68179_i0forward_frame_1 - 4.9e-19 68.0 0.2 5.3e-19 67.9 0.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 NODE_76120_length_207_cov_2.215116_g68179_i0forward_frame_1 - 0.0021 16.9 0.0 0.0021 16.9 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 NODE_76120_length_207_cov_2.215116_g68179_i0forward_frame_1 - 0.028 13.8 0.0 0.032 13.6 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain tRNA-synt_1d PF00750.19 NODE_76120_length_207_cov_2.215116_g68179_i0forward_frame_1 - 0.056 12.4 0.0 0.059 12.3 0.0 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (R) EDS1_EP PF18117.1 NODE_76119_length_207_cov_2.226744_g68178_i0reverse_frame_1 - 0.089 13.2 0.1 0.091 13.2 0.1 1.2 1 0 0 1 1 1 0 Enhanced disease susceptibility 1 protein EP domain Speriolin_N PF15058.6 NODE_76116_length_207_cov_2.244186_g68175_i0reverse_frame_1 - 0.072 13.2 0.3 0.086 12.9 0.3 1.1 1 0 0 1 1 1 0 Speriolin N terminus zf-RRN7 PF11781.8 NODE_76116_length_207_cov_2.244186_g68175_i0forward_frame_1 - 0.025 14.3 0.5 0.042 13.5 0.5 1.4 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-SAP30 PF13866.6 NODE_76106_length_207_cov_2.313953_g68165_i0forward_frame_1 - 0.048 13.8 0.1 0.048 13.8 0.1 1.2 1 0 0 1 1 1 0 SAP30 zinc-finger FAM221 PF14753.6 NODE_76100_length_207_cov_2.366279_g68159_i0reverse_frame_1 - 0.071 12.7 1.9 0.079 12.5 1.9 1.0 1 0 0 1 1 1 0 Protein FAM221A/B Pkinase PF00069.25 NODE_76094_length_207_cov_2.436047_g68153_i0reverse_frame_1 - 3.8e-05 23.2 0.1 4.9e-05 22.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 NODE_76094_length_207_cov_2.436047_g68153_i0reverse_frame_1 - 0.015 14.9 0.1 0.018 14.6 0.1 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUF3935 PF13071.6 NODE_76088_length_207_cov_2.517442_g68147_i0reverse_frame_1 - 0.053 14.1 0.0 0.073 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3935) DsrH PF04077.12 NODE_76084_length_207_cov_2.558140_g68143_i0forward_frame_1 - 0.074 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 DsrH like protein Zip PF02535.22 NODE_76074_length_207_cov_2.860465_g68133_i0reverse_frame_1 - 4.9e-17 62.2 0.5 4.9e-17 62.2 0.5 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter PMP22_Claudin PF00822.20 NODE_76074_length_207_cov_2.860465_g68133_i0reverse_frame_1 - 0.096 12.6 0.2 0.1 12.5 0.2 1.0 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family Pkinase PF00069.25 NODE_76066_length_207_cov_3.133721_g68125_i0forward_frame_1 - 2.6e-10 40.1 0.0 2.8e-10 40.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain tRNA-synt_2 PF00152.20 NODE_76058_length_207_cov_4.052326_g68117_i0reverse_frame_1 - 0.066 12.3 0.0 0.066 12.3 0.0 1.0 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) DUF2180 PF09947.9 NODE_76057_length_207_cov_4.831395_g68116_i0reverse_frame_1 - 0.002 18.1 0.2 0.0025 17.7 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) Methyltrans_RNA PF04452.14 NODE_76055_length_207_cov_17.203488_g68114_i0reverse_frame_1 - 9.2e-06 25.2 0.0 9.4e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 RNA methyltransferase 3HCDH_RFF PF18321.1 NODE_76055_length_207_cov_17.203488_g68114_i0reverse_frame_1 - 0.019 15.4 0.0 0.049 14.1 0.0 1.6 2 0 0 2 2 2 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain YqfQ PF14181.6 NODE_76045_length_207_cov_34.627907_g68104_i0reverse_frame_1 - 0.036 14.3 3.7 0.043 14.0 3.7 1.1 1 0 0 1 1 1 0 YqfQ-like protein DUF1286 PF06939.11 NODE_76045_length_207_cov_34.627907_g68104_i0forward_frame_1 - 0.027 14.7 0.7 0.033 14.4 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1286) Phage_holin_3_6 PF07332.11 NODE_76045_length_207_cov_34.627907_g68104_i0forward_frame_1 - 0.1 12.7 11.5 0.12 12.5 11.5 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III RseC_MucC PF04246.12 NODE_76045_length_207_cov_34.627907_g68104_i0forward_frame_1 - 1.8 8.5 6.9 2.1 8.3 6.9 1.0 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF2070 PF09843.9 NODE_76045_length_207_cov_34.627907_g68104_i0forward_frame_1 - 4.5 5.4 7.3 4.5 5.5 7.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF1138 PF06592.13 NODE_76036_length_207_cov_41.901163_g68095_i0reverse_frame_1 - 0.16 12.1 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1138) 60KD_IMP PF02096.20 NODE_76034_length_207_cov_43.209302_g68093_i0reverse_frame_1 - 0.067 13.1 9.2 0.075 12.9 9.2 1.1 1 0 0 1 1 1 0 60Kd inner membrane protein YajC PF02699.15 NODE_76033_length_207_cov_43.680233_g68092_i0forward_frame_1 - 0.021 14.7 0.3 0.033 14.1 0.3 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit STPPase_N PF16891.5 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_1 - 0.012 16.1 0.7 0.02 15.3 0.7 1.4 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain Viral_DNA_bp PF00747.17 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_1 - 4.6 4.3 7.4 4.7 4.2 7.4 1.0 1 0 0 1 1 1 0 ssDNA binding protein DUF2650 PF10853.8 NODE_76024_length_207_cov_57.866279_g68083_i0reverse_frame_1 - 0.018 14.8 3.0 0.03 14.0 3.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) DUF971 PF06155.12 NODE_76019_length_207_cov_63.982558_g68078_i0forward_frame_1 - 0.17 12.5 0.0 0.19 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF971) DUF3952 PF13130.6 NODE_76017_length_207_cov_67.395349_g68076_i0forward_frame_1 - 0.01 16.0 1.8 0.013 15.7 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3952) Bromodomain PF00439.25 NODE_76017_length_207_cov_67.395349_g68076_i0forward_frame_1 - 0.037 14.1 0.5 0.06 13.4 0.2 1.5 1 1 1 2 2 2 0 Bromodomain Myco_arth_vir_N PF09610.10 NODE_76017_length_207_cov_67.395349_g68076_i0forward_frame_1 - 0.37 10.9 3.9 0.57 10.3 3.9 1.3 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) zf-MYST PF17772.1 NODE_76016_length_207_cov_71.581395_g68075_i0forward_frame_1 - 0.015 14.9 0.0 0.28 10.8 0.0 2.0 2 0 0 2 2 2 0 MYST family zinc finger domain DUF1677 PF07911.13 NODE_76016_length_207_cov_71.581395_g68075_i0forward_frame_1 - 0.024 15.0 0.4 0.035 14.5 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1677) PIG-U PF06728.13 NODE_76012_length_207_cov_85.755814_g68071_i0forward_frame_1 - 1.7 7.6 5.8 1.8 7.6 5.8 1.1 1 0 0 1 1 1 0 GPI transamidase subunit PIG-U DUF667 PF05018.13 NODE_76002_length_207_cov_102.680233_g68061_i0forward_frame_1 - 0.11 12.2 0.0 0.13 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF667) BCL_N PF04714.13 NODE_75986_length_207_cov_625.895349_g68045_i0reverse_frame_1 - 0.036 14.1 1.6 0.054 13.6 1.6 1.3 1 0 0 1 1 1 0 BCL7, N-terminal conserver region ETRAMP PF09716.10 NODE_75986_length_207_cov_625.895349_g68045_i0forward_frame_1 - 0.1 12.7 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Babuvirus_MP PF07234.11 NODE_75984_length_207_cov_111783.494186_g68043_i0reverse_frame_1 - 0.99 9.6 6.5 1 9.6 6.5 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein Trypan_PARP PF05887.11 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 0.04 13.9 5.4 0.041 13.9 5.4 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF4770 PF15994.5 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 0.65 10.2 26.9 0.69 10.1 26.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4770) FAM176 PF14851.6 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 1.7 8.3 7.1 1.8 8.2 7.1 1.1 1 0 0 1 1 1 0 FAM176 family DUF719 PF05334.13 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 3 8.0 12.2 3.3 7.9 12.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF719) DUF4834 PF16118.5 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 3.8 8.5 17.7 5 8.1 17.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Tim54 PF11711.8 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 4.2 6.1 18.2 4.4 6.0 18.2 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Coilin_N PF15862.5 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 4.7 7.0 16.2 6.2 6.6 16.2 1.2 1 0 0 1 1 1 0 Coilin N-terminus CSG2 PF16965.5 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 5.1 5.9 6.1 5.1 5.9 6.1 1.0 1 0 0 1 1 1 0 Ceramide synthase regulator PIP5K PF01504.18 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 5.2 6.2 12.0 5.4 6.1 12.0 1.0 1 0 0 1 1 1 0 Phosphatidylinositol-4-phosphate 5-Kinase AIF_C PF14721.6 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 5.2 7.4 11.2 6 7.2 11.2 1.1 1 0 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term CPSF100_C PF13299.6 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 5.3 7.2 14.6 5.6 7.1 14.6 1.0 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal Peptidase_S49_N PF08496.10 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 7.3 6.6 12.5 8.2 6.5 12.5 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal ALMT PF11744.8 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 7.8 5.2 10.0 8.1 5.1 10.0 1.0 1 0 0 1 1 1 0 Aluminium activated malate transporter Rxt3 PF08642.10 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 8.7 7.1 10.2 10 6.9 10.2 1.2 1 0 0 1 1 1 0 Histone deacetylation protein Rxt3 V_ATPase_I PF01496.19 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 8.8 4.1 15.6 9.2 4.0 15.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family SpoIIP PF07454.11 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 8.9 5.7 18.4 9.5 5.6 18.4 1.0 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) Connexin PF00029.19 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 9.2 5.9 12.1 9.4 5.9 12.1 1.0 1 0 0 1 1 1 0 Connexin Peroxin-13_N PF04088.13 NODE_75983_length_208_cov_0.763006_g68042_i0reverse_frame_3 - 9.5 6.5 9.0 10 6.3 9.0 1.1 1 0 0 1 1 1 0 Peroxin 13, N-terminal region UbiA PF01040.18 NODE_75983_length_208_cov_0.763006_g68042_i0forward_frame_3 - 1.2 8.3 17.1 1.4 8.1 17.1 1.1 1 0 0 1 1 1 0 UbiA prenyltransferase family zf-HYPF PF07503.12 NODE_75974_length_208_cov_0.913295_g68033_i0forward_frame_2 - 0.0037 17.0 0.0 0.0053 16.5 0.0 1.3 1 0 0 1 1 1 1 HypF finger NST1 PF13945.6 NODE_75973_length_208_cov_0.919075_g68032_i0reverse_frame_2 - 6.1 6.9 20.3 6.4 6.8 20.3 1.0 1 0 0 1 1 1 0 Salt tolerance down-regulator EMC3_TMCO1 PF01956.16 NODE_75973_length_208_cov_0.919075_g68032_i0reverse_frame_2 - 9.2 6.0 7.0 10 5.8 7.0 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like SP_C-Propep PF08999.10 NODE_75970_length_208_cov_0.919075_g68029_i0reverse_frame_3 - 0.031 14.0 1.5 0.033 14.0 1.5 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF4307 PF14155.6 NODE_75970_length_208_cov_0.919075_g68029_i0reverse_frame_3 - 0.04 13.7 2.7 0.047 13.5 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF2895 PF11444.8 NODE_75970_length_208_cov_0.919075_g68029_i0reverse_frame_3 - 0.12 11.7 0.1 0.13 11.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2895) GBV-C_env PF12786.7 NODE_75970_length_208_cov_0.919075_g68029_i0reverse_frame_3 - 0.17 10.5 0.5 0.18 10.5 0.5 1.0 1 0 0 1 1 1 0 GB virus C genotype envelope DUF674 PF05056.12 NODE_75970_length_208_cov_0.919075_g68029_i0forward_frame_3 - 0.065 12.1 0.0 0.074 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF674) Lamprin PF06403.11 NODE_75969_length_208_cov_0.919075_g68028_i0forward_frame_2 - 0.0051 16.8 0.4 0.0055 16.7 0.4 1.1 1 0 0 1 1 1 1 Lamprin Toxin_31 PF08119.11 NODE_75966_length_208_cov_0.924855_g68025_i0reverse_frame_3 - 0.12 12.1 0.1 1.3 8.8 0.0 2.1 2 0 0 2 2 2 0 Scorpion acidic alpha-KTx toxin family HP1451_C PF18472.1 NODE_75965_length_208_cov_0.924855_g68024_i0reverse_frame_3 - 0.087 12.8 0.0 0.14 12.2 0.0 1.3 1 1 0 1 1 1 0 HP1451 C-terminal domain zf-C2HC PF01530.18 NODE_75963_length_208_cov_0.924855_g68022_i0reverse_frame_2 - 0.056 13.7 0.3 0.1 12.8 0.3 1.4 1 0 0 1 1 1 0 Zinc finger, C2HC type Pox_F17 PF04767.12 NODE_75956_length_208_cov_0.924855_g68015_i0reverse_frame_2 - 0.065 13.7 0.2 0.076 13.5 0.2 1.0 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein DUF3599 PF12206.8 NODE_75953_length_208_cov_0.924855_g68012_i0forward_frame_3 - 0.055 13.8 0.1 0.055 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3599) Amdo_NSP PF12475.8 NODE_75951_length_208_cov_0.924855_g68010_i0forward_frame_2 - 0.019 15.0 1.2 1.1 9.4 0.0 2.2 1 1 1 2 2 2 0 Amdovirus non-structural protein TMCO5 PF14992.6 NODE_75946_length_208_cov_0.924855_g68005_i0reverse_frame_3 - 0.93 9.0 2.5 0.96 9.0 2.5 1.0 1 0 0 1 1 1 0 TMCO5 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks391.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks391.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks391.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks391.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:41:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Phage_TTP_13 PF16463.5 NODE_75942_length_208_cov_0.976879_g68001_i0forward_frame_3 - 0.0028 17.2 0.0 0.0035 16.9 0.0 1.1 1 0 0 1 1 1 1 Phage tail tube protein family CCSMST1 PF15013.6 NODE_75942_length_208_cov_0.976879_g68001_i0forward_frame_3 - 0.037 14.2 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 CCSMST1 family ubiquitin PF00240.23 NODE_75941_length_208_cov_0.976879_g68000_i0reverse_frame_2 - 9.2e-05 22.1 0.2 0.00011 21.9 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin family NOP5NT PF08156.13 NODE_75940_length_208_cov_0.988439_g67999_i0forward_frame_2 - 0.32 11.4 3.2 2.3 8.7 1.5 2.2 2 0 0 2 2 2 0 NOP5NT (NUC127) domain DUF3435 PF11917.8 NODE_75937_length_208_cov_1.017341_g67996_i0reverse_frame_3 - 0.13 11.1 0.1 0.15 11.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Tad PF13400.6 NODE_75935_length_208_cov_1.034682_g67994_i0forward_frame_3 - 0.0065 16.8 3.8 0.0065 16.8 3.8 2.1 2 0 0 2 2 2 1 Putative Flp pilus-assembly TadE/G-like LCE PF14672.6 NODE_75931_length_208_cov_1.057803_g67990_i0forward_frame_2 - 5.6 7.6 10.2 15 6.3 10.1 1.8 1 1 0 1 1 1 0 Late cornified envelope Tropomyosin_1 PF12718.7 NODE_75928_length_208_cov_1.086705_g67987_i0forward_frame_2 - 0.076 13.2 0.2 0.085 13.0 0.2 1.1 1 0 0 1 1 1 0 Tropomyosin like Pox_P21 PF05313.12 NODE_75923_length_208_cov_1.098266_g67982_i0reverse_frame_2 - 0.025 14.1 1.5 0.026 14.1 1.5 1.0 1 0 0 1 1 1 0 Poxvirus P21 membrane protein DUF1356 PF07092.12 NODE_75923_length_208_cov_1.098266_g67982_i0reverse_frame_2 - 0.063 12.5 0.6 0.066 12.5 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) Laterosporulin PF17861.1 NODE_75919_length_208_cov_1.150289_g67978_i0reverse_frame_3 - 0.033 14.6 0.1 0.05 14.0 0.1 1.3 1 0 0 1 1 1 0 Laterosporulin defensin-like peptide MCM_lid PF17855.1 NODE_75919_length_208_cov_1.150289_g67978_i0forward_frame_3 - 6.9e-11 42.4 0.8 1.2e-10 41.7 0.8 1.4 1 0 0 1 1 1 1 MCM AAA-lid domain Spem1 PF15670.5 NODE_75919_length_208_cov_1.150289_g67978_i0forward_frame_2 - 3.3 7.2 7.2 3.6 7.1 7.2 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 SNARE PF05739.19 NODE_75917_length_208_cov_1.150289_g67976_i0forward_frame_3 - 0.97 9.5 2.0 1.7 8.7 2.0 1.4 1 0 0 1 1 1 0 SNARE domain DUF4215 PF13948.6 NODE_75916_length_208_cov_1.156069_g67975_i0reverse_frame_3 - 7.2e-05 23.1 6.7 7.2e-05 23.1 6.7 1.7 2 1 0 2 2 2 1 Domain of unknown function (DUF4215) zf-A20 PF01754.16 NODE_75916_length_208_cov_1.156069_g67975_i0reverse_frame_2 - 3.6 7.6 11.6 1.6 8.7 2.2 2.6 3 0 0 3 3 3 0 A20-like zinc finger Toxin_27 PF08099.11 NODE_75912_length_208_cov_1.156069_g67971_i0forward_frame_3 - 0.037 14.1 0.9 0.16 12.1 0.1 2.3 3 0 0 3 3 3 0 Scorpion calcine family TMEM154 PF15102.6 NODE_75912_length_208_cov_1.156069_g67971_i0forward_frame_3 - 0.056 13.3 0.1 0.068 13.1 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family SLD3 PF08639.10 NODE_75912_length_208_cov_1.156069_g67971_i0forward_frame_3 - 0.18 10.5 0.1 0.19 10.4 0.1 1.0 1 0 0 1 1 1 0 DNA replication regulator SLD3 ITAM_Cys-rich PF10538.9 NODE_75911_length_208_cov_1.161850_g67970_i0reverse_frame_2 - 0.019 14.7 1.3 0.036 13.8 1.3 1.4 1 0 0 1 1 1 0 Immunoreceptor tyrosine-based activation motif Ion_trans PF00520.31 NODE_75908_length_208_cov_1.219653_g67967_i0forward_frame_2 - 0.00025 20.3 3.2 0.00029 20.1 3.2 1.0 1 0 0 1 1 1 1 Ion transport protein DUF1506 PF07405.11 NODE_75908_length_208_cov_1.219653_g67967_i0forward_frame_2 - 0.13 12.4 0.1 0.15 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1506) COX5B PF01215.19 NODE_75906_length_208_cov_1.248555_g67965_i0forward_frame_2 - 0.024 14.3 0.1 0.026 14.2 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb PIP5K PF01504.18 NODE_75905_length_208_cov_1.254335_g67964_i0reverse_frame_2 - 0.023 13.9 0.1 0.026 13.8 0.1 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-4-phosphate 5-Kinase RAMP4 PF06624.12 NODE_75904_length_208_cov_1.260116_g67963_i0reverse_frame_3 - 2.3 8.3 6.7 3 8.0 6.7 1.2 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 PHP PF02811.19 NODE_75901_length_208_cov_1.271676_g67960_i0reverse_frame_2 - 0.12 12.7 0.1 0.13 12.6 0.1 1.0 1 0 0 1 1 1 0 PHP domain Cytochrom_B559 PF00283.19 NODE_75900_length_208_cov_1.277457_g67959_i0reverse_frame_3 - 0.37 10.3 0.2 0.37 10.3 0.2 2.4 4 0 0 4 4 4 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Phage_Gp15 PF06854.11 NODE_75895_length_208_cov_1.323699_g67954_i0reverse_frame_3 - 0.024 14.6 0.7 0.026 14.5 0.7 1.0 1 0 0 1 1 1 0 Bacteriophage Gp15 protein zf-NF-X1 PF01422.17 NODE_75894_length_208_cov_1.335260_g67953_i0forward_frame_3 - 1.8 8.7 5.7 0.37 10.9 1.7 1.8 2 0 0 2 2 2 0 NF-X1 type zinc finger DUF2917 PF11142.8 NODE_75893_length_208_cov_1.335260_g67952_i0reverse_frame_3 - 0.027 13.9 0.7 0.036 13.5 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2917) zf-H2C2_2 PF13465.6 NODE_75890_length_208_cov_1.358382_g67949_i0forward_frame_2 - 0.079 13.4 0.4 0.15 12.5 0.4 1.5 1 0 0 1 1 1 0 Zinc-finger double domain Gin PF10764.9 NODE_75889_length_208_cov_1.358382_g67948_i0reverse_frame_3 - 0.12 12.4 0.4 0.12 12.4 0.4 1.5 2 0 0 2 2 2 0 Inhibitor of sigma-G Gin Pyridox_oxase_2 PF12766.7 NODE_75883_length_208_cov_1.375723_g67942_i0reverse_frame_2 - 0.07 13.7 0.0 0.085 13.5 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF3819 PF12842.7 NODE_75883_length_208_cov_1.375723_g67942_i0reverse_frame_2 - 0.13 12.2 0.0 0.14 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3819) LYTB PF02401.18 NODE_75882_length_208_cov_1.375723_g67941_i0forward_frame_2 - 0.11 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 LytB protein HJURP_C PF12347.8 NODE_75880_length_208_cov_1.381503_g67939_i0forward_frame_3 - 0.092 12.8 0.8 0.14 12.2 0.4 1.7 1 1 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat zf-Di19 PF05605.12 NODE_75879_length_208_cov_1.381503_g67938_i0reverse_frame_2 - 0.00017 21.8 0.1 0.00024 21.4 0.1 1.2 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_4 PF13894.6 NODE_75879_length_208_cov_1.381503_g67938_i0reverse_frame_2 - 0.0057 17.4 0.3 0.011 16.4 0.3 1.6 1 0 0 1 1 1 1 C2H2-type zinc finger Zn_Tnp_IS1595 PF12760.7 NODE_75879_length_208_cov_1.381503_g67938_i0reverse_frame_2 - 0.076 13.0 0.0 0.098 12.6 0.0 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Fis1_TPR_N PF14852.6 NODE_75879_length_208_cov_1.381503_g67938_i0forward_frame_2 - 0.062 13.0 0.6 13 5.6 0.0 3.0 3 0 0 3 3 3 0 Fis1 N-terminal tetratricopeptide repeat ATPase PF06745.13 NODE_75877_length_208_cov_1.387283_g67936_i0forward_frame_3 - 0.13 11.6 0.0 0.15 11.4 0.0 1.0 1 0 0 1 1 1 0 KaiC RseC_MucC PF04246.12 NODE_75871_length_208_cov_1.387283_g67930_i0forward_frame_2 - 0.19 11.7 1.4 0.2 11.6 1.4 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC hNIFK_binding PF12196.8 NODE_75869_length_208_cov_1.387283_g67928_i0forward_frame_3 - 0.14 11.7 0.1 0.21 11.1 0.1 1.2 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK DoxD PF04173.13 NODE_75868_length_208_cov_1.387283_g67927_i0forward_frame_2 - 0.045 13.7 0.2 0.047 13.6 0.2 1.0 1 0 0 1 1 1 0 TQO small subunit DoxD DUF4637 PF15470.6 NODE_75864_length_208_cov_1.398844_g67923_i0reverse_frame_3 - 3.1 7.5 13.6 3.3 7.4 13.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Nucleos_tra2_N PF01773.20 NODE_75864_length_208_cov_1.398844_g67923_i0forward_frame_2 - 3.7 8.2 8.9 4.3 8.0 3.3 2.3 1 1 2 3 3 3 0 Na+ dependent nucleoside transporter N-terminus RabGAP-TBC PF00566.18 NODE_75861_length_208_cov_1.416185_g67920_i0forward_frame_3 - 0.00024 20.8 0.0 0.00026 20.7 0.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DPPIV_rep PF18811.1 NODE_75852_length_208_cov_1.445087_g67911_i0reverse_frame_2 - 0.16 11.9 0.3 10 6.2 0.0 2.3 2 0 0 2 2 2 0 Dipeptidyl peptidase IV (DPP IV) low complexity region Tudor_4 PF18358.1 NODE_75851_length_208_cov_1.450867_g67910_i0forward_frame_2 - 0.022 14.3 0.0 0.03 13.9 0.0 1.2 1 0 0 1 1 1 0 Histone methyltransferase Tudor domain C_tripleX PF02363.19 NODE_75848_length_208_cov_1.468208_g67907_i0forward_frame_3 - 0.055 13.8 3.0 0.15 12.4 3.0 1.8 1 1 0 1 1 1 0 Cysteine rich repeat YbgT_YccB PF08173.11 NODE_75848_length_208_cov_1.468208_g67907_i0forward_frame_2 - 0.15 12.2 3.1 0.96 9.6 0.1 2.2 1 1 1 2 2 2 0 Membrane bound YbgT-like protein C_tripleX PF02363.19 NODE_75848_length_208_cov_1.468208_g67907_i0forward_frame_2 - 6.2 7.3 13.9 1.7 9.1 1.0 2.6 3 0 0 3 3 3 0 Cysteine rich repeat FTA2 PF13095.6 NODE_75843_length_208_cov_1.502890_g67902_i0reverse_frame_3 - 0.15 11.7 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 SAND PF01342.21 NODE_75842_length_208_cov_1.508671_g67901_i0reverse_frame_3 - 0.0078 15.9 0.1 0.0092 15.7 0.1 1.1 1 0 0 1 1 1 1 SAND domain LysM PF01476.20 NODE_75841_length_208_cov_1.508671_g67900_i0reverse_frame_3 - 0.1 12.7 0.8 3.3 7.8 0.0 2.2 1 1 1 2 2 2 0 LysM domain UpxZ PF06603.11 NODE_75840_length_208_cov_1.520231_g67899_i0reverse_frame_2 - 0.1 12.9 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 UpxZ family of transcription anti-terminator antagonists VP4_haemagglut PF00426.18 NODE_75840_length_208_cov_1.520231_g67899_i0forward_frame_2 - 0.0043 17.3 0.1 0.0046 17.2 0.1 1.0 1 0 0 1 1 1 1 Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain DUF4680 PF15730.5 NODE_75835_length_208_cov_1.543353_g67894_i0forward_frame_2 - 0.028 14.8 0.9 0.032 14.6 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4680) DUF3969 PF13108.6 NODE_75833_length_208_cov_1.549133_g67892_i0reverse_frame_3 - 0.0062 16.5 0.8 0.0074 16.3 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3969) DUF3267 PF11667.8 NODE_75833_length_208_cov_1.549133_g67892_i0forward_frame_2 - 0.059 13.7 3.3 0.063 13.6 3.3 1.1 1 0 0 1 1 1 0 Putative zincin peptidase STAG PF08514.11 NODE_75832_length_208_cov_1.554913_g67891_i0reverse_frame_3 - 0.066 13.1 0.1 0.068 13.1 0.1 1.1 1 0 0 1 1 1 0 STAG domain Phtf-FEM1B_bdg PF12129.8 NODE_75824_length_208_cov_1.606936_g67883_i0reverse_frame_2 - 0.58 10.0 3.8 0.59 10.0 3.8 1.0 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor PMP22_Claudin PF00822.20 NODE_75821_length_208_cov_1.612717_g67880_i0reverse_frame_3 - 0.11 12.4 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family PDR_assoc PF08370.11 NODE_75814_length_208_cov_1.664740_g67873_i0forward_frame_3 - 0.079 12.7 4.0 2.4 8.0 0.4 2.3 1 1 1 2 2 2 0 Plant PDR ABC transporter associated Adeno_E3 PF06040.11 NODE_75814_length_208_cov_1.664740_g67873_i0forward_frame_2 - 0.083 13.1 4.3 0.094 12.9 4.3 1.1 1 0 0 1 1 1 0 Adenovirus E3 protein XAF1_C PF18608.1 NODE_75813_length_208_cov_1.664740_g67872_i0forward_frame_2 - 0.13 11.8 0.3 0.18 11.4 0.3 1.4 1 1 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain MSL2-CXC PF16682.5 NODE_75811_length_208_cov_1.676301_g67870_i0forward_frame_3 - 0.04 14.1 3.3 0.072 13.2 3.3 1.5 1 0 0 1 1 1 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Ephrin_rec_like PF07699.13 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 1.5e-09 37.4 19.5 6.5e-08 32.2 9.5 2.3 1 1 1 2 2 2 2 Putative ephrin-receptor like NCD3G PF07562.14 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 0.00033 20.6 5.6 0.046 13.7 1.4 2.3 1 1 0 2 2 2 2 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 0.014 15.8 9.0 0.68 10.4 1.0 3.2 1 1 2 3 3 3 0 TNFR/NGFR cysteine-rich region zf-ACC PF17848.1 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 0.056 13.5 5.7 2.6 8.2 0.0 3.8 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain Pentapeptide_2 PF01469.18 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 0.23 11.4 26.2 0.51 10.3 11.6 3.4 2 2 0 2 2 2 0 Pentapeptide repeats (8 copies) DUF2318 PF10080.9 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 0.51 10.5 7.6 4 7.6 2.1 1.7 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) VSP PF03302.13 NODE_75809_length_208_cov_1.682081_g67868_i0reverse_frame_3 - 1.4 7.7 23.7 1.6 7.5 23.7 1.1 1 0 0 1 1 1 0 Giardia variant-specific surface protein Herpes_TK_C PF08465.10 NODE_75806_length_208_cov_1.699422_g67865_i0reverse_frame_2 - 0.086 12.6 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 Thymidine kinase from Herpesvirus C-terminal SpoVAC_SpoVAEB PF03862.13 NODE_75805_length_208_cov_1.705202_g67864_i0forward_frame_2 - 0.0074 16.6 0.1 0.0083 16.4 0.1 1.0 1 0 0 1 1 1 1 SpoVAC/SpoVAEB sporulation membrane protein Op_neuropeptide PF08035.11 NODE_75804_length_208_cov_1.716763_g67863_i0reverse_frame_2 - 0.055 13.3 0.0 0.082 12.8 0.0 1.3 1 0 0 1 1 1 0 Opioids neuropeptide Herpes_env PF01673.18 NODE_75804_length_208_cov_1.716763_g67863_i0forward_frame_3 - 0.11 11.5 0.1 0.12 11.3 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus putative major envelope glycoprotein UIM PF02809.20 NODE_75800_length_208_cov_1.757225_g67859_i0forward_frame_2 - 0.00079 19.2 2.1 0.0014 18.4 2.1 1.5 1 0 0 1 1 1 1 Ubiquitin interaction motif Pkinase PF00069.25 NODE_75799_length_208_cov_1.774566_g67858_i0forward_frame_3 - 5.1e-05 22.8 0.1 5.4e-05 22.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_75799_length_208_cov_1.774566_g67858_i0forward_frame_3 - 0.02 14.2 0.0 0.022 14.1 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase Aminotran_5 PF00266.19 NODE_75797_length_208_cov_1.791908_g67856_i0reverse_frame_2 - 2.8e-22 79.2 0.3 2.9e-22 79.1 0.3 1.0 1 0 0 1 1 1 1 Aminotransferase class-V EpoR_lig-bind PF09067.10 NODE_75796_length_208_cov_1.809249_g67855_i0reverse_frame_2 - 0.013 15.7 0.4 0.013 15.7 0.4 1.1 1 0 0 1 1 1 0 Erythropoietin receptor, ligand binding Fanconi_A PF03511.14 NODE_75795_length_208_cov_1.815029_g67854_i0forward_frame_3 - 0.83 9.6 4.0 1.1 9.2 4.0 1.4 1 1 0 1 1 1 0 Fanconi anaemia group A protein DUF3624 PF12292.8 NODE_75788_length_208_cov_1.838150_g67847_i0reverse_frame_3 - 0.031 14.7 0.2 0.041 14.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3624) Phage_holin_2_1 PF04971.12 NODE_75787_length_208_cov_1.843931_g67846_i0reverse_frame_3 - 0.0086 16.1 0.0 0.013 15.5 0.0 1.2 1 0 0 1 1 1 1 Bacteriophage P21 holin S Vault PF01505.18 NODE_75787_length_208_cov_1.843931_g67846_i0reverse_frame_3 - 0.16 12.1 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Major Vault Protein repeat domain zf-ANAPC11 PF12861.7 NODE_75782_length_208_cov_1.855491_g67841_i0reverse_frame_3 - 0.06 13.4 2.0 0.063 13.3 2.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Defensin_5 PF18251.1 NODE_75782_length_208_cov_1.855491_g67841_i0forward_frame_3 - 0.29 11.3 8.5 2.2 8.4 0.7 2.2 2 0 0 2 2 2 0 Fungal defensin Copsin Joubert PF15392.6 NODE_75779_length_208_cov_1.901734_g67838_i0reverse_frame_2 - 0.025 14.3 1.0 0.026 14.3 1.0 1.0 1 0 0 1 1 1 0 Joubert syndrome-associated DUF1168 PF06658.12 NODE_75779_length_208_cov_1.901734_g67838_i0reverse_frame_2 - 0.03 14.1 0.5 0.036 13.9 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) C8 PF08742.11 NODE_75778_length_208_cov_1.907514_g67837_i0forward_frame_2 - 0.14 12.7 0.0 0.17 12.3 0.0 1.1 1 0 0 1 1 1 0 C8 domain Gag_p24 PF00607.20 NODE_75778_length_208_cov_1.907514_g67837_i0forward_frame_2 - 0.2 11.5 0.0 0.21 11.4 0.0 1.0 1 0 0 1 1 1 0 gag gene protein p24 (core nucleocapsid protein) Spore_YhaL PF14147.6 NODE_75777_length_208_cov_1.924855_g67836_i0reverse_frame_2 - 0.08 12.6 0.8 0.14 11.8 0.8 1.4 1 0 0 1 1 1 0 Sporulation protein YhaL UPF0506 PF11703.8 NODE_75775_length_208_cov_1.930636_g67834_i0forward_frame_2 - 0.49 10.8 15.5 0.57 10.6 15.5 1.1 1 0 0 1 1 1 0 UPF0506 DUF3890 PF13029.6 NODE_75772_length_208_cov_1.965318_g67831_i0forward_frame_3 - 0.24 11.9 4.7 2.7 8.5 2.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3890) CKS PF01111.19 NODE_75768_length_208_cov_1.976879_g67827_i0forward_frame_3 - 0.0019 18.4 0.5 0.0041 17.4 0.1 1.8 2 0 0 2 2 2 1 Cyclin-dependent kinase regulatory subunit Epimerase PF01370.21 NODE_75767_length_208_cov_1.976879_g67826_i0forward_frame_2 - 0.19 11.2 0.0 0.21 11.0 0.0 1.0 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Laminin_EGF PF00053.24 NODE_75766_length_208_cov_1.988439_g67825_i0forward_frame_2 - 0.00024 21.2 16.6 0.00063 19.8 8.8 2.4 1 1 1 2 2 2 1 Laminin EGF domain EGF_2 PF07974.13 NODE_75766_length_208_cov_1.988439_g67825_i0forward_frame_2 - 0.0021 18.4 21.2 0.021 15.2 3.4 3.3 3 1 0 3 3 3 3 EGF-like domain EGF PF00008.27 NODE_75766_length_208_cov_1.988439_g67825_i0forward_frame_2 - 1.4 9.3 19.5 0.77 10.1 0.6 3.3 3 0 0 3 3 3 0 EGF-like domain Brr6_like_C_C PF10104.9 NODE_75765_length_208_cov_2.000000_g67824_i0reverse_frame_3 - 0.57 10.0 5.3 0.65 9.8 5.3 1.1 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain Collectrin PF16959.5 NODE_75763_length_208_cov_2.080925_g67822_i0forward_frame_3 - 0.14 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter Toxin_28 PF08115.11 NODE_75753_length_208_cov_2.248555_g67812_i0forward_frame_3 - 0.026 14.4 1.5 0.026 14.4 1.5 1.7 2 0 0 2 2 2 0 SFI toxin family ODAPH PF15848.5 NODE_75751_length_208_cov_2.260116_g67810_i0reverse_frame_2 - 0.018 15.5 1.3 0.046 14.2 1.3 1.7 1 1 0 1 1 1 0 Odontogenesis associated phosphoprotein DUF4668 PF15701.5 NODE_75747_length_208_cov_2.317919_g67806_i0reverse_frame_3 - 0.22 11.3 3.7 0.29 11.0 3.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) Baculo_11_kDa PF06143.11 NODE_75746_length_208_cov_2.317919_g67805_i0forward_frame_3 - 3 7.5 8.3 4 7.1 8.3 1.3 1 1 0 1 1 1 0 Baculovirus 11 kDa family zf-C2H2_aberr PF17017.5 NODE_75743_length_208_cov_2.381503_g67802_i0forward_frame_2 - 0.035 14.2 1.4 0.039 14.1 1.4 1.1 1 0 0 1 1 1 0 Aberrant zinc-finger DUF998 PF06197.13 NODE_75738_length_208_cov_2.421965_g67797_i0reverse_frame_2 - 0.091 12.4 4.2 0.15 11.7 4.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF998) DUF2368 PF10166.9 NODE_75738_length_208_cov_2.421965_g67797_i0reverse_frame_2 - 0.42 10.2 1.1 0.71 9.5 1.1 1.4 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2368) DUF4131 PF13567.6 NODE_75738_length_208_cov_2.421965_g67797_i0reverse_frame_2 - 1.3 8.7 4.4 1.5 8.5 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) SNX17_FERM_C PF18116.1 NODE_75737_length_208_cov_2.473988_g67796_i0forward_frame_2 - 0.12 12.5 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Sorting Nexin 17 FERM C-terminal domain VKOR PF07884.14 NODE_75729_length_208_cov_2.601156_g67788_i0forward_frame_3 - 0.015 15.5 0.2 0.017 15.3 0.2 1.1 1 0 0 1 1 1 0 Vitamin K epoxide reductase family CARM1 PF11531.8 NODE_75728_length_208_cov_2.653179_g67787_i0forward_frame_2 - 0.014 15.6 1.0 0.014 15.6 1.0 1.3 1 1 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal IQ PF00612.27 NODE_75727_length_208_cov_2.653179_g67786_i0forward_frame_3 - 2.7e-05 23.6 1.2 7.2e-05 22.2 1.2 1.8 1 0 0 1 1 1 1 IQ calmodulin-binding motif MORN PF02493.20 NODE_75724_length_208_cov_2.832370_g67783_i0reverse_frame_3 - 0.0099 15.7 3.8 0.017 15.0 3.8 1.3 1 0 0 1 1 1 1 MORN repeat MORN PF02493.20 NODE_75724_length_208_cov_2.832370_g67783_i0reverse_frame_2 - 1e-07 31.4 9.4 0.00014 21.5 0.5 2.8 3 0 0 3 3 3 2 MORN repeat DUF423 PF04241.15 NODE_75724_length_208_cov_2.832370_g67783_i0forward_frame_3 - 0.16 12.2 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF423) SPC25 PF06703.11 NODE_75722_length_208_cov_2.895954_g67781_i0forward_frame_3 - 0.036 13.8 0.2 0.037 13.8 0.2 1.1 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF1163 PF06651.11 NODE_75721_length_208_cov_2.936416_g67780_i0forward_frame_3 - 0.025 14.7 0.4 0.041 14.0 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1163) Interferon PF00143.19 NODE_75719_length_208_cov_3.005780_g67778_i0reverse_frame_3 - 0.052 13.7 1.1 0.054 13.7 1.1 1.0 1 0 0 1 1 1 0 Interferon alpha/beta domain DUF4957 PF16318.5 NODE_75718_length_208_cov_3.011561_g67777_i0forward_frame_3 - 0.052 13.5 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) Cys_rich_KTR PF14205.6 NODE_75717_length_208_cov_3.086705_g67776_i0forward_frame_3 - 0.036 13.9 1.5 0.044 13.6 1.5 1.2 1 0 0 1 1 1 0 Cysteine-rich KTR Corazonin PF17308.2 NODE_75717_length_208_cov_3.086705_g67776_i0forward_frame_2 - 0.077 13.4 0.0 0.082 13.3 0.0 1.1 1 0 0 1 1 1 0 Pro-corazonin DUF5466 PF17554.2 NODE_75716_length_208_cov_3.092486_g67775_i0reverse_frame_2 - 0.032 14.4 0.0 0.051 13.8 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5466) PAS_4 PF08448.10 NODE_75716_length_208_cov_3.092486_g67775_i0forward_frame_2 - 0.011 16.0 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 0 PAS fold Gemini_V2 PF01524.17 NODE_75716_length_208_cov_3.092486_g67775_i0forward_frame_2 - 0.079 13.2 0.3 1.1 9.5 0.1 1.9 1 1 1 2 2 2 0 Geminivirus V2 protein DUF4479 PF14794.6 NODE_75716_length_208_cov_3.092486_g67775_i0forward_frame_2 - 0.14 12.1 0.4 17 5.4 0.0 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4479) DUF2674 PF10879.8 NODE_75714_length_208_cov_3.306358_g67773_i0reverse_frame_3 - 0.13 11.8 0.0 0.53 9.9 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2674) Myotub-related PF06602.14 NODE_75714_length_208_cov_3.306358_g67773_i0forward_frame_2 - 0.0028 16.6 0.4 0.0036 16.3 0.4 1.2 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain DUF3578 PF12102.8 NODE_75712_length_208_cov_3.485549_g67771_i0reverse_frame_3 - 0.037 13.6 0.0 0.04 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3578) TraI_2 PF07514.11 NODE_75712_length_208_cov_3.485549_g67771_i0reverse_frame_3 - 0.094 11.6 0.0 0.094 11.6 0.0 1.0 1 0 0 1 1 1 0 Putative helicase Pacifastin_I PF05375.13 NODE_75712_length_208_cov_3.485549_g67771_i0forward_frame_3 - 0.061 13.0 1.9 0.083 12.6 1.9 1.2 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) Peripla_BP_4 PF13407.6 NODE_75711_length_208_cov_3.699422_g67770_i0forward_frame_3 - 3.1e-15 56.5 0.3 3.1e-15 56.4 0.3 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 NODE_75711_length_208_cov_3.699422_g67770_i0forward_frame_3 - 0.029 13.8 0.0 0.032 13.7 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family DUF4860 PF16152.5 NODE_75711_length_208_cov_3.699422_g67770_i0forward_frame_3 - 0.048 13.5 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4860) Phage_sheath_1C PF17482.2 NODE_75711_length_208_cov_3.699422_g67770_i0forward_frame_3 - 0.085 12.8 0.2 0.091 12.8 0.2 1.0 1 0 0 1 1 1 0 Phage tail sheath C-terminal domain RCC1_2 PF13540.6 NODE_75708_length_208_cov_3.982659_g67767_i0reverse_frame_3 - 0.1 12.4 2.2 5 7.1 0.0 2.3 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat DUF5437 PF17505.2 NODE_75708_length_208_cov_3.982659_g67767_i0forward_frame_2 - 0.67 10.0 4.3 6.6 6.9 1.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5437) Zn_ribbon_17 PF17120.5 NODE_75705_length_208_cov_4.612717_g67764_i0forward_frame_2 - 0.29 10.8 6.7 0.3 10.8 0.4 2.3 2 1 1 3 3 3 0 Zinc-ribbon, C4HC2 type YabA PF06156.13 NODE_75700_length_208_cov_16.549133_g67759_i0reverse_frame_2 - 0.096 13.3 0.1 0.11 13.2 0.1 1.3 1 1 0 1 1 1 0 Initiation control protein YabA Afaf PF15339.6 NODE_75697_length_208_cov_24.601156_g67756_i0reverse_frame_2 - 0.047 13.4 0.5 0.048 13.4 0.5 1.0 1 0 0 1 1 1 0 Acrosome formation-associated factor OAD_gamma PF04277.13 NODE_75697_length_208_cov_24.601156_g67756_i0reverse_frame_2 - 3.1 8.4 5.5 1.7 9.3 2.6 1.8 1 1 1 2 2 2 0 Oxaloacetate decarboxylase, gamma chain MRP PF09387.10 NODE_75695_length_208_cov_30.971098_g67754_i0reverse_frame_2 - 0.0055 16.7 0.3 0.0055 16.7 0.3 1.1 1 0 0 1 1 1 1 Mitochondrial RNA binding protein MRP zf-B_box PF00643.24 NODE_75695_length_208_cov_30.971098_g67754_i0reverse_frame_2 - 0.66 10.2 7.8 1.5 9.0 2.1 2.2 2 0 0 2 2 2 0 B-box zinc finger Lig_chan PF00060.26 NODE_75695_length_208_cov_30.971098_g67754_i0forward_frame_3 - 0.77 9.6 2.3 0.97 9.3 2.3 1.3 1 1 0 1 1 1 0 Ligand-gated ion channel Hepatitis_core PF00906.20 NODE_75687_length_208_cov_36.520231_g67746_i0forward_frame_3 - 2.7 7.5 5.8 3.1 7.3 5.8 1.1 1 0 0 1 1 1 0 Hepatitis core antigen TIC20 PF16166.5 NODE_75686_length_208_cov_38.312139_g67745_i0forward_frame_3 - 0.1 12.4 5.5 0.1 12.4 5.5 1.0 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like DUF2070 PF09843.9 NODE_75686_length_208_cov_38.312139_g67745_i0forward_frame_3 - 9.4 4.4 15.5 10 4.3 15.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) SDH_sah PF01972.16 NODE_75682_length_208_cov_42.520231_g67741_i0reverse_frame_2 - 0.58 9.1 1.9 0.55 9.2 1.9 1.0 1 0 0 1 1 1 0 Serine dehydrogenase proteinase ABC_membrane PF00664.23 NODE_75682_length_208_cov_42.520231_g67741_i0forward_frame_3 - 0.00013 21.8 0.4 0.00014 21.6 0.4 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF4985 PF16373.5 NODE_75682_length_208_cov_42.520231_g67741_i0forward_frame_3 - 0.11 13.0 0.7 0.16 12.5 0.7 1.4 1 1 0 1 1 1 0 Domain of unknown function Pilin_PilA PF14245.6 NODE_75678_length_208_cov_45.728324_g67737_i0reverse_frame_3 - 0.064 13.2 1.1 0.066 13.2 0.9 1.3 1 1 0 1 1 1 0 Type IV pilin PilA INCENP_ARK-bind PF03941.15 NODE_75678_length_208_cov_45.728324_g67737_i0reverse_frame_2 - 0.1 12.6 0.7 0.13 12.2 0.7 1.2 1 0 0 1 1 1 0 Inner centromere protein, ARK binding region P22_AR_N PF10547.9 NODE_75675_length_208_cov_48.416185_g67734_i0reverse_frame_2 - 0.031 14.6 0.0 0.042 14.2 0.0 1.3 1 0 0 1 1 1 0 P22_AR N-terminal domain WD40 PF00400.32 NODE_75674_length_208_cov_48.554913_g67733_i0forward_frame_3 - 3.9e-06 27.5 0.1 5.3e-06 27.1 0.1 1.2 1 0 0 1 1 1 1 WD domain, G-beta repeat Ribosomal_S2 PF00318.20 NODE_75673_length_208_cov_49.930636_g67732_i0forward_frame_3 - 0.11 11.7 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Ribosomal protein S2 CTV_P33 PF07184.11 NODE_75672_length_208_cov_50.277457_g67731_i0forward_frame_3 - 0.027 13.5 0.5 0.03 13.4 0.5 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein 3-alpha PF03475.14 NODE_75669_length_208_cov_50.676301_g67728_i0reverse_frame_2 - 0.099 12.5 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 3-alpha domain DUF4834 PF16118.5 NODE_75668_length_208_cov_52.132948_g67727_i0reverse_frame_3 - 0.055 14.4 1.6 0.065 14.2 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) YukC PF10140.9 NODE_75668_length_208_cov_52.132948_g67727_i0forward_frame_3 - 0.23 10.2 0.6 0.26 10.1 0.6 1.0 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Sigma_reg_N PF13800.6 NODE_75668_length_208_cov_52.132948_g67727_i0forward_frame_3 - 3.3 8.1 7.3 4.2 7.7 7.3 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal bPH_2 PF03703.14 NODE_75667_length_208_cov_53.138728_g67726_i0forward_frame_3 - 0.063 13.5 0.2 7.8 6.8 0.1 2.1 1 1 1 2 2 2 0 Bacterial PH domain RAI1 PF08652.11 NODE_75663_length_208_cov_61.502890_g67722_i0reverse_frame_2 - 0.03 14.5 0.1 0.036 14.3 0.1 1.2 1 0 0 1 1 1 0 RAI1 like PD-(D/E)XK nuclease PDDEXK_9 PF08011.11 NODE_75663_length_208_cov_61.502890_g67722_i0reverse_frame_2 - 0.039 13.8 0.0 0.043 13.7 0.0 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily DUF3432 PF11914.8 NODE_75660_length_208_cov_65.468208_g67719_i0forward_frame_3 - 0.012 15.8 2.2 0.016 15.5 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) ECR1_N PF14382.6 NODE_75660_length_208_cov_65.468208_g67719_i0forward_frame_3 - 0.085 12.7 2.0 4.3 7.2 0.1 2.2 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region CIAPIN1 PF05093.13 NODE_75660_length_208_cov_65.468208_g67719_i0forward_frame_2 - 0.058 13.9 5.6 1.4 9.5 0.2 2.2 1 1 1 2 2 2 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis zf-CCCH_7 PF18586.1 NODE_75660_length_208_cov_65.468208_g67719_i0forward_frame_2 - 8.1 6.9 7.0 15 6.0 0.6 2.1 1 1 1 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 TMPIT PF07851.13 NODE_75659_length_208_cov_67.618497_g67718_i0forward_frame_2 - 0.16 11.2 0.1 0.18 11.1 0.1 1.0 1 0 0 1 1 1 0 TMPIT-like protein Nucleo_LEF-12 PF06256.11 NODE_75656_length_208_cov_70.468208_g67715_i0reverse_frame_3 - 0.077 12.8 0.8 0.083 12.6 0.8 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus LEF-12 protein DUF2795 PF11387.8 NODE_75652_length_208_cov_85.895954_g67711_i0reverse_frame_2 - 0.11 12.7 0.0 0.15 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2795) Varsurf_PPLC PF03490.13 NODE_75650_length_208_cov_93.254335_g67709_i0forward_frame_3 - 0.01 15.7 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C MID_MedPIWI PF18296.1 NODE_75650_length_208_cov_93.254335_g67709_i0forward_frame_3 - 0.06 13.1 0.2 0.068 13.0 0.2 1.1 1 0 0 1 1 1 0 MID domain of medPIWI PRCH PF03967.13 NODE_75649_length_208_cov_95.774566_g67708_i0forward_frame_3 - 0.1 12.8 0.5 0.11 12.8 0.5 1.1 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region DUF761 PF05553.11 NODE_75642_length_208_cov_176.895954_g67701_i0reverse_frame_2 - 0.036 13.6 0.2 0.051 13.1 0.2 1.2 1 0 0 1 1 1 0 Cotton fibre expressed protein DUF4043 PF13252.6 NODE_75642_length_208_cov_176.895954_g67701_i0forward_frame_2 - 0.25 10.4 0.0 0.27 10.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4043) Rad60-SLD_2 PF13881.6 NODE_75640_length_208_cov_197.427746_g67699_i0forward_frame_3 - 0.016 15.3 0.0 0.018 15.1 0.0 1.3 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Fijivirus_P9-2 PF06837.11 NODE_75638_length_208_cov_218.953757_g67697_i0reverse_frame_2 - 1.2 8.5 7.7 1.3 8.4 7.7 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein Acyl-CoA_dh_1 PF00441.24 NODE_75638_length_208_cov_218.953757_g67697_i0forward_frame_2 - 0.00044 20.5 0.2 0.00052 20.2 0.2 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Enterotoxin_a PF01375.17 NODE_75636_length_208_cov_242.462428_g67695_i0reverse_frame_3 - 0.11 12.1 0.2 0.11 12.0 0.2 1.0 1 0 0 1 1 1 0 Heat-labile enterotoxin alpha chain Fer4_5 PF12801.7 NODE_75636_length_208_cov_242.462428_g67695_i0reverse_frame_2 - 0.15 12.0 2.3 0.25 11.3 2.3 1.3 1 0 0 1 1 1 0 4Fe-4S binding domain YL1_C PF08265.11 NODE_75634_length_208_cov_255.427746_g67693_i0reverse_frame_3 - 0.0068 16.1 0.1 0.01 15.6 0.1 1.2 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain NADH_4Fe-4S PF10589.9 NODE_75634_length_208_cov_255.427746_g67693_i0reverse_frame_2 - 0.41 10.7 5.9 0.55 10.4 5.9 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DUF1143 PF06608.11 NODE_75627_length_208_cov_7853.404624_g67686_i0reverse_frame_3 - 0.015 15.4 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) DUF1143 PF06608.11 NODE_75626_length_208_cov_7853.404624_g67685_i0reverse_frame_3 - 0.012 15.6 0.0 0.012 15.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) Ras PF00071.22 NODE_75623_length_208_cov_141714.780347_g67682_i0forward_frame_3 - 6e-08 32.4 0.2 7.3e-08 32.2 0.2 1.1 1 0 0 1 1 1 1 Ras family Orbi_VP5 PF00901.17 NODE_75623_length_208_cov_141714.780347_g67682_i0forward_frame_3 - 0.04 12.3 0.0 0.04 12.3 0.0 1.0 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP5 DUF2448 PF10476.9 NODE_75621_length_209_cov_0.810345_g67680_i0forward_frame_3 - 0.097 12.5 1.7 0.1 12.4 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2448) DUF4572 PF15139.6 NODE_75618_length_209_cov_0.879310_g67677_i0reverse_frame_3 - 0.037 13.9 0.2 0.046 13.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4572) NAD_Gly3P_dh_N PF01210.23 NODE_75616_length_209_cov_0.902299_g67675_i0forward_frame_2 - 0.15 12.0 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Mak10 PF04112.13 NODE_75610_length_209_cov_0.913793_g67669_i0reverse_frame_3 - 0.12 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Mak10 subunit, NatC N(alpha)-terminal acetyltransferase TA0956 PF11513.8 NODE_75608_length_209_cov_0.913793_g67667_i0reverse_frame_2 - 0.12 12.7 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 Thermoplasma acidophilum protein TA0956 DUF2976 PF11190.8 NODE_75607_length_209_cov_0.913793_g67666_i0reverse_frame_2 - 0.12 12.2 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) MID_MedPIWI PF18296.1 NODE_75606_length_209_cov_0.913793_g67665_i0forward_frame_3 - 0.12 12.1 0.2 0.13 12.0 0.2 1.2 1 0 0 1 1 1 0 MID domain of medPIWI DUF4641 PF15483.6 NODE_75606_length_209_cov_0.913793_g67665_i0forward_frame_3 - 0.14 11.2 0.0 0.17 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4641) CheW PF01584.19 NODE_75606_length_209_cov_0.913793_g67665_i0forward_frame_3 - 0.16 11.6 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 CheW-like domain PSP1 PF04468.12 NODE_75602_length_209_cov_0.913793_g67661_i0reverse_frame_2 - 0.16 12.2 0.3 0.2 12.0 0.3 1.2 1 0 0 1 1 1 0 PSP1 C-terminal conserved region AadA_C PF18280.1 NODE_75600_length_209_cov_0.919540_g67659_i0reverse_frame_2 - 0.039 14.1 0.1 0.046 13.9 0.1 1.2 1 0 0 1 1 1 0 Aminoglycoside adenyltransferase C-terminal domain Mac PF12464.8 NODE_75599_length_209_cov_0.919540_g67658_i0reverse_frame_3 - 0.027 14.7 1.8 1.4 9.2 0.2 2.1 1 1 1 2 2 2 0 Maltose acetyltransferase DUF1877 PF08974.10 NODE_75599_length_209_cov_0.919540_g67658_i0reverse_frame_3 - 0.053 13.6 3.0 0.074 13.1 3.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1877) DUF4972 PF16342.5 NODE_75599_length_209_cov_0.919540_g67658_i0reverse_frame_3 - 0.064 12.9 2.7 0.066 12.9 2.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) DUF5320 PF17253.2 NODE_75599_length_209_cov_0.919540_g67658_i0reverse_frame_3 - 0.24 12.5 1.4 0.28 12.3 1.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5320) NinE PF05322.11 NODE_75588_length_209_cov_0.919540_g67647_i0reverse_frame_3 - 0.089 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 NINE Protein DUF667 PF05018.13 NODE_75587_length_209_cov_0.919540_g67646_i0forward_frame_2 - 0.00055 19.7 1.2 0.00059 19.6 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) AMO PF02461.16 NODE_75587_length_209_cov_0.919540_g67646_i0forward_frame_2 - 0.0092 15.8 0.4 0.0097 15.7 0.4 1.1 1 0 0 1 1 1 1 Ammonia monooxygenase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks392.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks392.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks392.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks392.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:25:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NicO PF03824.16 NODE_75581_length_209_cov_0.919540_g67640_i0reverse_frame_3 - 9.3 5.5 11.0 9.4 5.5 11.0 1.0 1 0 0 1 1 1 0 High-affinity nickel-transport protein 4HBT PF03061.22 NODE_75578_length_209_cov_0.919540_g67637_i0reverse_frame_3 - 0.058 13.7 0.1 0.081 13.3 0.1 1.3 1 0 0 1 1 1 0 Thioesterase superfamily AMP-binding PF00501.28 NODE_75578_length_209_cov_0.919540_g67637_i0reverse_frame_3 - 0.067 11.8 0.2 0.067 11.8 0.2 1.1 1 0 0 1 1 1 0 AMP-binding enzyme GLE1 PF07817.13 NODE_75578_length_209_cov_0.919540_g67637_i0reverse_frame_3 - 0.17 11.1 0.2 0.18 11.0 0.2 1.0 1 0 0 1 1 1 0 GLE1-like protein SLC3A2_N PF16028.5 NODE_75577_length_209_cov_0.919540_g67636_i0forward_frame_3 - 0.062 12.9 0.5 0.092 12.3 0.5 1.3 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus T_Ag_DNA_bind PF02217.16 NODE_75575_length_209_cov_0.919540_g67634_i0reverse_frame_2 - 0.1 13.2 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 Origin of replication binding protein LodA_C PF18417.1 NODE_75575_length_209_cov_0.919540_g67634_i0forward_frame_3 - 0.041 13.6 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 L-lysine epsilon oxidase C-terminal domain TMEM131_like PF12371.8 NODE_75573_length_209_cov_0.919540_g67632_i0reverse_frame_2 - 0.08 13.2 0.2 0.093 13.0 0.2 1.2 1 0 0 1 1 1 0 Transmembrane protein 131-like DUF1700 PF08006.11 NODE_75573_length_209_cov_0.919540_g67632_i0forward_frame_3 - 3.2 7.3 12.2 3.4 7.2 12.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Baculo_11_kDa PF06143.11 NODE_75573_length_209_cov_0.919540_g67632_i0forward_frame_3 - 5.1 6.7 11.8 6.3 6.4 11.8 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family Med27 PF11571.8 NODE_75570_length_209_cov_0.948276_g67629_i0forward_frame_2 - 0.13 12.7 1.4 0.17 12.3 1.2 1.3 1 1 0 1 1 1 0 Mediator complex subunit 27 CAAX_1 PF15895.5 NODE_75567_length_209_cov_0.977011_g67626_i0forward_frame_3 - 0.0099 15.8 5.8 0.011 15.7 5.8 1.1 1 0 0 1 1 1 1 CAAX box cerebral protein 1 PTN_MK_N PF05196.13 NODE_75566_length_209_cov_0.982759_g67625_i0reverse_frame_2 - 0.031 14.5 0.5 0.077 13.2 0.1 1.8 2 0 0 2 2 2 0 PTN/MK heparin-binding protein family, N-terminal domain DUF3403 PF11883.8 NODE_75561_length_209_cov_1.040230_g67620_i0reverse_frame_2 - 0.15 12.2 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3403) DUF809 PF05663.11 NODE_75560_length_209_cov_1.040230_g67619_i0forward_frame_2 - 0.53 10.4 2.0 0.64 10.2 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) E6 PF00518.17 NODE_75558_length_209_cov_1.051724_g67617_i0reverse_frame_2 - 0.023 15.1 0.1 0.028 14.8 0.1 1.4 1 1 0 1 1 1 0 Early Protein (E6) Cys_rich_KTR PF14205.6 NODE_75558_length_209_cov_1.051724_g67617_i0reverse_frame_2 - 0.047 13.5 0.0 0.075 12.8 0.0 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR SR-25 PF10500.9 NODE_75554_length_209_cov_1.074713_g67613_i0forward_frame_2 - 8.3 5.9 10.7 8.7 5.9 10.7 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein mTERF PF02536.14 NODE_75547_length_209_cov_1.103448_g67606_i0reverse_frame_2 - 0.035 13.0 0.9 0.042 12.8 0.9 1.0 1 0 0 1 1 1 0 mTERF Lamprin PF06403.11 NODE_75546_length_209_cov_1.103448_g67605_i0reverse_frame_3 - 0.018 15.0 0.7 0.02 14.9 0.7 1.1 1 0 0 1 1 1 0 Lamprin CASP_C PF08172.12 NODE_75543_length_209_cov_1.137931_g67602_i0reverse_frame_2 - 0.0025 17.2 4.5 0.0025 17.2 4.5 1.1 1 0 0 1 1 1 1 CASP C terminal HTH_25 PF13413.6 NODE_75543_length_209_cov_1.137931_g67602_i0reverse_frame_2 - 0.11 12.4 0.1 0.16 11.8 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF848 PF05852.11 NODE_75543_length_209_cov_1.137931_g67602_i0reverse_frame_2 - 0.12 12.5 4.1 0.13 12.3 4.1 1.0 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) DUF295 PF03478.18 NODE_75542_length_209_cov_1.137931_g67601_i0forward_frame_2 - 0.042 13.4 0.0 0.048 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF295) Minor_tail_Z PF06763.11 NODE_75541_length_209_cov_1.143678_g67600_i0reverse_frame_3 - 0.096 12.5 0.0 0.096 12.5 0.0 1.0 1 0 0 1 1 1 0 Prophage minor tail protein Z (GPZ) CC PF04942.14 NODE_75538_length_209_cov_1.149425_g67597_i0reverse_frame_3 - 0.012 15.8 3.2 1.4 9.2 0.1 3.6 3 1 1 4 4 4 0 CC domain DUF35_N PF12172.8 NODE_75538_length_209_cov_1.149425_g67597_i0reverse_frame_3 - 0.18 11.7 3.8 0.68 9.9 0.1 2.4 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) NCD3G PF07562.14 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 8.4e-06 25.7 10.0 0.012 15.5 4.0 2.2 2 0 0 2 2 2 2 Nine Cysteines Domain of family 3 GPCR Ephrin_rec_like PF07699.13 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 0.0016 18.2 20.7 0.038 13.7 2.0 2.6 1 1 1 2 2 2 2 Putative ephrin-receptor like Opy2 PF09463.10 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 0.057 13.7 17.8 0.24 11.7 1.2 2.9 2 1 1 3 3 3 0 Opy2 protein Prot_inhib_II PF02428.15 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 0.079 13.4 16.2 0.69 10.4 1.2 3.0 1 1 2 3 3 3 0 Potato type II proteinase inhibitor family FhuF_C PF11575.8 NODE_75538_length_209_cov_1.149425_g67597_i0forward_frame_2 - 0.71 9.9 0.2 0.71 9.9 0.2 4.0 5 0 0 5 5 5 0 FhuF 2Fe-2S C-terminal domain LpxD PF04613.14 NODE_75537_length_209_cov_1.149425_g67596_i0reverse_frame_2 - 1.6 8.6 7.4 2.7 7.8 6.7 1.9 1 1 0 1 1 1 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Auts2 PF15336.6 NODE_75537_length_209_cov_1.149425_g67596_i0forward_frame_3 - 1.7 8.7 7.4 8.5 6.4 0.8 2.4 1 1 1 2 2 2 0 Autism susceptibility gene 2 protein Rubredoxin PF00301.20 NODE_75536_length_209_cov_1.149425_g67595_i0reverse_frame_2 - 0.32 11.1 5.4 0.48 10.5 5.4 1.5 1 1 0 1 1 1 0 Rubredoxin CODH_A_N PF18537.1 NODE_75534_length_209_cov_1.149425_g67593_i0reverse_frame_3 - 0.01 15.8 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 0 Carbon monoxide dehydrogenase subunit alpha N-terminal domain zf-RING_10 PF16685.5 NODE_75527_length_209_cov_1.201149_g67586_i0forward_frame_2 - 0.01 16.0 0.9 0.015 15.5 0.9 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 DUF4872 PF16169.5 NODE_75527_length_209_cov_1.201149_g67586_i0forward_frame_2 - 0.098 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4872) DUF817 PF05675.12 NODE_75525_length_209_cov_1.206897_g67584_i0forward_frame_3 - 0.17 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF817) DUF1338 PF07063.13 NODE_75522_length_209_cov_1.247126_g67581_i0reverse_frame_3 - 0.15 11.2 0.0 0.18 11.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) DUF1598 PF07643.11 NODE_75522_length_209_cov_1.247126_g67581_i0forward_frame_3 - 0.0074 16.5 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1598) CPSase_L_D2 PF02786.17 NODE_75518_length_209_cov_1.270115_g67577_i0reverse_frame_2 - 9e-24 84.1 0.0 9.7e-24 84.0 0.0 1.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain DUF1178 PF06676.11 NODE_75517_length_209_cov_1.281609_g67576_i0reverse_frame_2 - 0.15 12.5 0.0 0.16 12.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) Mito_carr PF00153.27 NODE_75515_length_209_cov_1.298851_g67574_i0reverse_frame_3 - 1.5e-05 24.8 0.3 1.7e-05 24.6 0.3 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein FixP_N PF14715.6 NODE_75515_length_209_cov_1.298851_g67574_i0reverse_frame_3 - 0.091 12.5 0.3 0.13 12.0 0.3 1.2 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP SOCS_box PF07525.16 NODE_75513_length_209_cov_1.327586_g67572_i0forward_frame_2 - 0.003 17.9 3.0 0.003 17.9 3.0 1.6 2 0 0 2 2 2 1 SOCS box Antimicrobial11 PF08106.11 NODE_75506_length_209_cov_1.362069_g67565_i0reverse_frame_3 - 0.19 11.8 2.1 0.19 11.8 2.1 2.2 3 0 0 3 3 3 0 Formaecin family DUF3915 PF13054.6 NODE_75504_length_209_cov_1.367816_g67563_i0reverse_frame_2 - 0.13 12.3 0.2 0.13 12.2 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Transglut_core2 PF13369.6 NODE_75504_length_209_cov_1.367816_g67563_i0forward_frame_2 - 0.019 14.5 0.0 0.022 14.3 0.0 1.0 1 0 0 1 1 1 0 Transglutaminase-like superfamily Gam PF06064.11 NODE_75503_length_209_cov_1.367816_g67562_i0reverse_frame_3 - 0.08 13.2 0.0 0.087 13.1 0.0 1.2 1 0 0 1 1 1 0 Host-nuclease inhibitor protein Gam GSAP-16 PF14959.6 NODE_75497_length_209_cov_1.379310_g67556_i0reverse_frame_2 - 0.041 13.8 0.1 0.068 13.1 0.1 1.3 1 1 0 1 1 1 0 gamma-Secretase-activating protein C-term Glycoprotein_G PF00802.19 NODE_75494_length_209_cov_1.379310_g67553_i0forward_frame_3 - 0.066 12.6 2.5 0.068 12.5 2.5 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G LacAB_rpiB PF02502.18 NODE_75491_length_209_cov_1.379310_g67550_i0forward_frame_3 - 0.0083 16.1 0.0 0.0087 16.0 0.0 1.0 1 0 0 1 1 1 1 Ribose/Galactose Isomerase zf-FLZ PF04570.14 NODE_75489_length_209_cov_1.379310_g67548_i0forward_frame_3 - 0.055 12.9 0.0 0.074 12.5 0.0 1.2 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 pPIWI_RE_Z PF18155.1 NODE_75488_length_209_cov_1.379310_g67547_i0forward_frame_3 - 0.13 12.2 0.0 0.13 12.1 0.0 1.0 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z ICEA PF05315.11 NODE_75485_length_209_cov_1.379310_g67544_i0reverse_frame_2 - 0.11 11.9 0.4 0.37 10.2 0.2 1.7 1 1 1 2 2 2 0 ICEA Protein GWT1 PF06423.12 NODE_75483_length_209_cov_1.385057_g67542_i0forward_frame_3 - 1.7 8.8 7.0 1.9 8.6 7.0 1.1 1 0 0 1 1 1 0 GWT1 Pilin_GH PF16734.5 NODE_75482_length_209_cov_1.396552_g67541_i0reverse_frame_2 - 0.069 13.5 0.0 0.075 13.3 0.0 1.0 1 0 0 1 1 1 0 Type IV pilin-like G and H, putative Fungal_trans_2 PF11951.8 NODE_75481_length_209_cov_1.402299_g67540_i0reverse_frame_2 - 0.028 13.3 0.7 0.028 13.2 0.7 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain MCH PF02289.16 NODE_75473_length_209_cov_1.442529_g67532_i0forward_frame_2 - 0.095 12.0 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Cyclohydrolase (MCH) Arm-DNA-bind_2 PF12167.8 NODE_75471_length_209_cov_1.448276_g67530_i0reverse_frame_3 - 0.05 13.5 2.1 0.075 13.0 2.1 1.2 1 0 0 1 1 1 0 Arm DNA-binding domain PBP1_TM PF14812.6 NODE_75471_length_209_cov_1.448276_g67530_i0reverse_frame_2 - 0.18 12.2 6.2 0.2 12.0 6.2 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal FAM176 PF14851.6 NODE_75471_length_209_cov_1.448276_g67530_i0reverse_frame_2 - 0.46 10.1 2.6 0.47 10.1 2.6 1.1 1 0 0 1 1 1 0 FAM176 family DUF3767 PF12597.8 NODE_75471_length_209_cov_1.448276_g67530_i0forward_frame_3 - 0.038 13.8 0.1 0.04 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) GpcrRhopsn4 PF10192.9 NODE_75471_length_209_cov_1.448276_g67530_i0forward_frame_2 - 0.028 13.8 8.2 0.033 13.6 8.2 1.0 1 0 0 1 1 1 0 Rhodopsin-like GPCR transmembrane domain Saf_2TM PF18303.1 NODE_75471_length_209_cov_1.448276_g67530_i0forward_frame_2 - 0.24 11.0 2.4 0.29 10.7 2.4 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain PikAIV_N PF18605.1 NODE_75470_length_209_cov_1.448276_g67529_i0reverse_frame_3 - 0.054 13.1 0.1 0.085 12.5 0.1 1.3 1 0 0 1 1 1 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Med3 PF11593.8 NODE_75468_length_209_cov_1.465517_g67527_i0reverse_frame_3 - 6.1 5.9 8.0 6.1 5.9 8.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Adeno_PIX PF03955.14 NODE_75468_length_209_cov_1.465517_g67527_i0forward_frame_2 - 0.38 10.9 2.8 1.8 8.8 2.8 1.8 1 1 0 1 1 1 0 Adenovirus hexon-associated protein (IX) H2TH PF06831.14 NODE_75467_length_209_cov_1.471264_g67526_i0forward_frame_2 - 2e-09 37.3 0.0 2.2e-09 37.2 0.0 1.0 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain Shisa PF13908.6 NODE_75466_length_209_cov_1.477011_g67525_i0reverse_frame_2 - 0.04 14.2 1.0 0.043 14.0 1.0 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator PolyG_pol PF01518.16 NODE_75464_length_209_cov_1.494253_g67523_i0reverse_frame_3 - 0.18 10.5 0.0 0.2 10.3 0.0 1.0 1 0 0 1 1 1 0 Sigma NS protein Doppel PF11466.8 NODE_75460_length_209_cov_1.528736_g67519_i0forward_frame_3 - 0.077 12.7 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Prion-like protein Doppel DUF3958 PF13125.6 NODE_75459_length_209_cov_1.540230_g67518_i0reverse_frame_2 - 0.004 17.3 0.8 0.0043 17.2 0.8 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF3958) GIT_CC PF16559.5 NODE_75459_length_209_cov_1.540230_g67518_i0reverse_frame_2 - 0.023 14.6 0.4 0.038 13.8 0.4 1.4 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor HTH_50 PF18024.1 NODE_75459_length_209_cov_1.540230_g67518_i0reverse_frame_2 - 0.084 12.5 0.1 0.16 11.6 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain Fer2_2 PF01799.20 NODE_75456_length_209_cov_1.545977_g67515_i0forward_frame_2 - 0.016 15.2 0.2 0.018 15.0 0.2 1.3 1 0 0 1 1 1 0 [2Fe-2S] binding domain Kinesin PF00225.23 NODE_75454_length_209_cov_1.551724_g67513_i0forward_frame_2 - 1.5e-21 76.7 0.2 1.6e-21 76.6 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_75454_length_209_cov_1.551724_g67513_i0forward_frame_2 - 2.1e-15 56.9 0.1 2.3e-15 56.8 0.1 1.0 1 0 0 1 1 1 1 Microtubule binding AAA_7 PF12775.7 NODE_75454_length_209_cov_1.551724_g67513_i0forward_frame_2 - 0.005 16.4 0.0 0.0053 16.3 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region ResIII PF04851.15 NODE_75454_length_209_cov_1.551724_g67513_i0forward_frame_2 - 0.21 11.6 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit tRNA_bind PF01588.20 NODE_75453_length_209_cov_1.557471_g67512_i0forward_frame_3 - 0.041 14.0 0.0 0.052 13.7 0.0 1.1 1 0 0 1 1 1 0 Putative tRNA binding domain YdjM PF04307.14 NODE_75450_length_209_cov_1.586207_g67509_i0reverse_frame_2 - 0.11 11.8 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase ELMO_CED12 PF04727.13 NODE_75444_length_209_cov_1.603448_g67503_i0forward_frame_3 - 1.2e-14 54.8 0.0 1.2e-14 54.8 0.0 1.0 1 0 0 1 1 1 1 ELMO/CED-12 family DUF674 PF05056.12 NODE_75440_length_209_cov_1.609195_g67499_i0reverse_frame_3 - 0.019 13.9 1.0 0.02 13.8 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF674) Cys_rich_FGFR PF00839.17 NODE_75440_length_209_cov_1.609195_g67499_i0reverse_frame_2 - 0.03 14.5 0.5 0.036 14.2 0.5 1.3 1 1 0 1 1 1 0 Cysteine rich repeat Lamprin PF06403.11 NODE_75438_length_209_cov_1.626437_g67497_i0forward_frame_3 - 0.049 13.6 1.7 0.056 13.4 1.7 1.0 1 0 0 1 1 1 0 Lamprin Hormone_4 PF00220.17 NODE_75437_length_209_cov_1.643678_g67496_i0forward_frame_2 - 0.01 15.7 1.5 0.029 14.3 1.5 1.7 1 0 0 1 1 1 0 Neurohypophysial hormones, N-terminal Domain GP3 PF03076.14 NODE_75436_length_209_cov_1.655172_g67495_i0reverse_frame_3 - 0.0004 20.5 0.1 0.00043 20.4 0.1 1.1 1 0 0 1 1 1 1 Equine arteritis virus GP3 Transformer PF06495.11 NODE_75436_length_209_cov_1.655172_g67495_i0reverse_frame_2 - 3.1 7.8 16.0 3.5 7.7 16.0 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein Presenilin PF01080.17 NODE_75436_length_209_cov_1.655172_g67495_i0reverse_frame_2 - 8.9 5.0 8.8 8.5 5.0 8.8 1.0 1 0 0 1 1 1 0 Presenilin DUF2516 PF10724.9 NODE_75436_length_209_cov_1.655172_g67495_i0forward_frame_2 - 0.051 13.9 2.3 0.071 13.4 2.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2516) Sarcolipin PF05366.11 NODE_75436_length_209_cov_1.655172_g67495_i0forward_frame_2 - 0.22 11.3 0.5 0.22 11.3 0.5 2.4 2 0 0 2 2 2 0 Sarcolipin DUF4131 PF13567.6 NODE_75435_length_209_cov_1.655172_g67494_i0reverse_frame_2 - 5.4 6.6 6.0 5.7 6.5 6.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) COX2_TM PF02790.15 NODE_75434_length_209_cov_1.660920_g67493_i0reverse_frame_3 - 0.11 12.7 0.1 0.13 12.5 0.1 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain TetR_C_8 PF14278.6 NODE_75434_length_209_cov_1.660920_g67493_i0forward_frame_2 - 0.053 13.6 0.4 0.06 13.5 0.4 1.1 1 0 0 1 1 1 0 Transcriptional regulator C-terminal region Adhes-Ig_like PF09085.10 NODE_75430_length_209_cov_1.706897_g67489_i0forward_frame_2 - 0.15 12.2 0.1 0.18 12.0 0.1 1.1 1 0 0 1 1 1 0 Adhesion molecule, immunoglobulin-like NDUF_B7 PF05676.13 NODE_75424_length_209_cov_1.735632_g67483_i0forward_frame_3 - 0.16 11.7 1.6 0.24 11.1 0.3 1.8 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) LRR_1 PF00560.33 NODE_75423_length_209_cov_1.741379_g67482_i0reverse_frame_2 - 0.14 12.8 3.8 0.32 11.7 3.8 1.8 1 1 0 1 1 1 0 Leucine Rich Repeat LRR_4 PF12799.7 NODE_75423_length_209_cov_1.741379_g67482_i0reverse_frame_2 - 0.18 12.3 7.1 0.1 13.0 5.1 1.6 1 1 1 2 2 2 0 Leucine Rich repeats (2 copies) V-set PF07686.17 NODE_75421_length_209_cov_1.758621_g67480_i0reverse_frame_2 - 0.066 13.4 0.9 0.08 13.1 0.9 1.0 1 0 0 1 1 1 0 Immunoglobulin V-set domain BMF PF15185.6 NODE_75419_length_209_cov_1.764368_g67478_i0forward_frame_3 - 0.013 15.2 0.6 0.014 15.2 0.6 1.0 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis DUF632 PF04782.12 NODE_75413_length_209_cov_1.787356_g67472_i0forward_frame_2 - 0.047 13.0 0.0 0.048 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF632) FbpC_C_terminal PF17845.1 NODE_75409_length_209_cov_1.821839_g67468_i0reverse_frame_2 - 0.071 13.2 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 FbpC C-terminal regulatory nucleotide binding domain Comm PF15957.5 NODE_75408_length_209_cov_1.821839_g67467_i0reverse_frame_3 - 0.12 12.7 0.5 0.14 12.5 0.5 1.1 1 0 0 1 1 1 0 Commissureless RVT_N PF13655.6 NODE_75408_length_209_cov_1.821839_g67467_i0forward_frame_3 - 0.031 14.5 0.2 0.04 14.2 0.2 1.1 1 0 0 1 1 1 0 N-terminal domain of reverse transcriptase SPASM PF13186.6 NODE_75405_length_209_cov_1.833333_g67464_i0reverse_frame_2 - 1.1e-05 25.8 0.3 1.7e-05 25.2 0.3 1.3 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain DUF3641 PF12345.8 NODE_75405_length_209_cov_1.833333_g67464_i0reverse_frame_2 - 0.003 17.6 0.1 0.003 17.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3641) zf-Paramyx-P PF13008.7 NODE_75402_length_209_cov_1.856322_g67461_i0forward_frame_2 - 0.33 10.5 5.8 0.64 9.5 5.8 1.5 1 0 0 1 1 1 0 Zinc-binding domain of Paramyxoviridae V protein DUF4668 PF15701.5 NODE_75399_length_209_cov_1.873563_g67458_i0reverse_frame_2 - 0.42 10.4 7.9 0.47 10.3 7.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) Torus PF16131.5 NODE_75398_length_209_cov_1.873563_g67457_i0forward_frame_3 - 0.00049 20.8 0.8 0.00051 20.7 0.8 1.1 1 0 0 1 1 1 1 Torus domain DUF3141 PF11339.8 NODE_75398_length_209_cov_1.873563_g67457_i0forward_frame_3 - 0.23 9.8 0.0 0.25 9.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3141) Mucin_bdg PF03272.13 NODE_75394_length_209_cov_1.896552_g67453_i0forward_frame_2 - 0.079 13.0 0.1 0.079 13.0 0.1 1.1 1 0 0 1 1 1 0 Putative mucin or carbohydrate-binding module SlyX PF04102.12 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.0059 17.2 7.6 0.0072 16.9 7.6 1.2 1 0 0 1 1 1 1 SlyX Topoisom_I PF01028.20 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.0078 15.5 6.2 0.0089 15.3 6.2 1.0 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core ALIX_LYPXL_bnd PF13949.6 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.025 13.9 8.3 0.029 13.7 8.3 1.0 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV Phage_GP20 PF06810.11 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.039 13.8 7.0 0.041 13.7 7.0 1.0 1 0 0 1 1 1 0 Phage minor structural protein GP20 XhlA PF10779.9 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.095 12.9 6.5 0.13 12.5 4.5 1.8 1 1 1 2 2 2 0 Haemolysin XhlA K1 PF02960.14 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.1 12.7 1.4 0.13 12.4 1.4 1.1 1 0 0 1 1 1 0 K1 glycoprotein Tup_N PF08581.10 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.16 12.3 11.2 0.19 12.1 11.2 1.2 1 0 0 1 1 1 0 Tup N-terminal Rho_Binding PF08912.11 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.17 12.8 11.4 0.22 12.4 11.4 1.1 1 0 0 1 1 1 0 Rho Binding Cluap1 PF10234.9 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.18 11.2 9.5 0.2 11.0 9.5 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 TMPIT PF07851.13 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.23 10.7 8.9 0.26 10.5 8.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein DivIC PF04977.15 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.36 10.6 6.6 0.65 9.8 6.4 1.4 1 1 0 1 1 1 0 Septum formation initiator Macoilin PF09726.9 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.37 9.3 12.2 0.41 9.1 12.2 1.0 1 0 0 1 1 1 0 Macoilin family DUF3953 PF13129.6 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.56 10.0 0.1 0.56 10.0 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3953) Atg14 PF10186.9 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 0.93 8.5 8.3 1.1 8.3 8.3 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4446 PF14584.6 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 1.3 9.0 6.4 0.59 10.1 4.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) DUF4407 PF14362.6 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 3.1 7.0 6.1 3.4 6.9 6.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) 60KD_IMP PF02096.20 NODE_75393_length_209_cov_1.913793_g67452_i0reverse_frame_3 - 6.2 6.7 6.9 7.5 6.4 6.9 1.1 1 0 0 1 1 1 0 60Kd inner membrane protein PHM7_cyt PF14703.6 NODE_75391_length_209_cov_1.931034_g67450_i0forward_frame_3 - 8.4e-05 22.9 0.1 9.4e-05 22.7 0.1 1.1 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter TBX PF12598.8 NODE_75389_length_209_cov_1.959770_g67448_i0forward_frame_3 - 0.11 13.2 1.1 0.17 12.7 1.1 1.4 1 0 0 1 1 1 0 T-box transcription factor DUF3271 PF11675.8 NODE_75383_length_209_cov_2.034483_g67442_i0reverse_frame_3 - 0.033 13.4 0.0 0.035 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3271) MADF_DNA_bdg PF10545.9 NODE_75381_length_209_cov_2.040230_g67440_i0reverse_frame_3 - 0.029 14.7 0.8 0.034 14.5 0.8 1.1 1 0 0 1 1 1 0 Alcohol dehydrogenase transcription factor Myb/SANT-like TTD PF12148.8 NODE_75380_length_209_cov_2.051724_g67439_i0reverse_frame_2 - 0.14 12.0 1.7 5 7.0 0.0 2.0 1 1 1 2 2 2 0 Tandem tudor domain within UHRF1 RVT_1 PF00078.27 NODE_75379_length_209_cov_2.051724_g67438_i0reverse_frame_3 - 0.0025 17.4 0.0 0.0029 17.2 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Aminotran_1_2 PF00155.21 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 1.5e-14 53.9 0.0 1.5e-14 53.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 0.038 12.9 0.0 0.043 12.8 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class-V Beta_elim_lyase PF01212.21 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 0.039 13.2 0.0 0.042 13.1 0.0 1.0 1 0 0 1 1 1 0 Beta-eliminating lyase Aminotran_MocR PF12897.7 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 0.043 12.6 0.0 0.043 12.6 0.0 1.0 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Cys_Met_Meta_PP PF01053.20 NODE_75377_length_209_cov_2.086207_g67436_i0reverse_frame_2 - 0.077 11.5 0.0 0.083 11.4 0.0 1.0 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme PHY PF00360.20 NODE_75374_length_209_cov_2.114943_g67433_i0reverse_frame_3 - 0.21 10.9 0.0 0.24 10.7 0.0 1.0 1 0 0 1 1 1 0 Phytochrome region Chordopox_L2 PF05803.12 NODE_75372_length_209_cov_2.155172_g67431_i0reverse_frame_3 - 0.17 11.7 5.7 0.21 11.4 5.7 1.2 1 0 0 1 1 1 0 Chordopoxvirus L2 protein Dimer_Tnp_Tn5 PF02281.16 NODE_75372_length_209_cov_2.155172_g67431_i0forward_frame_3 - 0.22 11.2 0.0 0.25 11.1 0.0 1.1 1 0 0 1 1 1 0 Transposase Tn5 dimerisation domain HPIP PF15226.6 NODE_75369_length_209_cov_2.178161_g67428_i0forward_frame_3 - 0.32 11.4 1.9 0.35 11.3 1.9 1.1 1 0 0 1 1 1 0 HCF-1 beta-propeller-interacting protein family CCAP PF11105.8 NODE_75367_length_209_cov_2.183908_g67426_i0forward_frame_3 - 0.11 12.4 0.3 0.14 12.1 0.3 1.2 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a DUF4083 PF13314.6 NODE_75367_length_209_cov_2.183908_g67426_i0forward_frame_3 - 0.5 10.3 2.3 0.65 10.0 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) Host_attach PF10116.9 NODE_75366_length_209_cov_2.218391_g67425_i0reverse_frame_2 - 0.17 12.5 3.1 0.2 12.2 3.1 1.1 1 0 0 1 1 1 0 Protein required for attachment to host cells CZB PF13682.6 NODE_75365_length_209_cov_2.224138_g67424_i0forward_frame_2 - 0.00025 21.4 0.1 0.00028 21.3 0.1 1.2 1 0 0 1 1 1 1 Chemoreceptor zinc-binding domain MotCF PF09158.10 NODE_75364_length_209_cov_2.241379_g67423_i0reverse_frame_2 - 0.026 14.6 0.1 0.028 14.5 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage T4 MotA, C-terminal FSAP_sig_propep PF03032.15 NODE_75364_length_209_cov_2.241379_g67423_i0forward_frame_3 - 0.06 13.4 1.2 0.12 12.4 1.2 1.6 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide Defensin_2 PF01097.18 NODE_75360_length_209_cov_2.293103_g67419_i0reverse_frame_2 - 0.059 13.3 3.5 0.059 13.3 3.5 1.9 2 0 0 2 2 2 0 Arthropod defensin GTP_cyclohydro2 PF00925.20 NODE_75355_length_209_cov_2.379310_g67414_i0forward_frame_2 - 1.9e-28 99.1 0.1 2e-28 99.0 0.1 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase II Chlorophyllase2 PF12740.7 NODE_75354_length_209_cov_2.390805_g67413_i0forward_frame_2 - 0.22 10.4 0.0 0.22 10.4 0.0 1.0 1 0 0 1 1 1 0 Chlorophyllase enzyme MapZ_EC1 PF18041.1 NODE_75353_length_209_cov_2.465517_g67412_i0reverse_frame_3 - 0.045 14.0 0.2 0.055 13.7 0.2 1.1 1 0 0 1 1 1 0 MapZ extracellular domain 1 MORN PF02493.20 NODE_75351_length_209_cov_2.517241_g67410_i0reverse_frame_3 - 0.069 13.1 7.3 2.1 8.4 0.1 2.6 2 1 1 3 3 3 0 MORN repeat ERGIC_N PF13850.6 NODE_75349_length_209_cov_2.563218_g67408_i0reverse_frame_2 - 0.1 13.0 1.4 0.098 13.0 0.8 1.3 1 1 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ras PF00071.22 NODE_75348_length_209_cov_2.591954_g67407_i0reverse_frame_3 - 1.6e-12 47.3 0.0 1.7e-12 47.3 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_75348_length_209_cov_2.591954_g67407_i0reverse_frame_3 - 0.01 16.1 0.0 0.016 15.4 0.0 1.3 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase PPI_Ypi1 PF07491.11 NODE_75343_length_209_cov_2.712644_g67402_i0reverse_frame_2 - 0.038 13.8 0.5 0.068 13.0 0.5 1.4 1 0 0 1 1 1 0 Protein phosphatase inhibitor DUF3862 PF12978.7 NODE_75343_length_209_cov_2.712644_g67402_i0reverse_frame_2 - 0.064 13.1 0.0 0.072 12.9 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3862) S_2TMBeta PF18153.1 NODE_75342_length_209_cov_2.741379_g67401_i0forward_frame_2 - 0.0055 16.5 0.0 0.0065 16.3 0.0 1.0 1 0 0 1 1 1 1 SMODS-associating 2TM, beta-strand rich effector domain ResB PF05140.14 NODE_75333_length_209_cov_3.120690_g67392_i0reverse_frame_3 - 0.011 14.6 0.3 0.011 14.5 0.3 1.0 1 0 0 1 1 1 0 ResB-like family Pigment_DH PF06324.11 NODE_75330_length_209_cov_3.402299_g67389_i0reverse_frame_3 - 0.091 12.9 0.5 14 6.1 0.1 2.3 2 0 0 2 2 2 0 Pigment-dispersing hormone (PDH) QueC PF06508.13 NODE_75330_length_209_cov_3.402299_g67389_i0reverse_frame_3 - 0.18 11.3 0.0 0.19 11.2 0.0 1.1 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Fungal_trans PF04082.18 NODE_75330_length_209_cov_3.402299_g67389_i0forward_frame_2 - 0.12 11.4 0.0 0.3 10.1 0.0 1.6 2 0 0 2 2 2 0 Fungal specific transcription factor domain Rax2 PF12768.7 NODE_75329_length_209_cov_3.465517_g67388_i0reverse_frame_2 - 0.11 12.0 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Glyco_transf_8C PF08437.10 NODE_75329_length_209_cov_3.465517_g67388_i0forward_frame_3 - 0.0068 16.5 0.0 0.0084 16.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 8 C-terminal Meleagrin PF08189.11 NODE_75328_length_209_cov_3.528736_g67387_i0forward_frame_2 - 4.9 6.9 6.7 0.36 10.6 1.9 1.5 2 0 0 2 2 2 0 Meleagrin/Cygnin family Gemin6 PF06372.12 NODE_75327_length_209_cov_3.551724_g67386_i0forward_frame_3 - 0.15 11.6 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Gemin6 protein Peptidase_M16_M PF16187.5 NODE_75325_length_209_cov_3.666667_g67384_i0reverse_frame_2 - 6.4e-10 38.8 0.2 6.9e-10 38.7 0.2 1.0 1 0 0 1 1 1 1 Middle or third domain of peptidase_M16 Rad17 PF03215.15 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.00043 20.2 0.1 0.00049 20.1 0.1 1.1 1 0 0 1 1 1 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.00048 20.1 0.0 0.00071 19.5 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.003 17.3 0.0 0.0045 16.7 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.0037 17.8 0.0 0.0039 17.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter ATPase_2 PF01637.18 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.0069 16.3 0.4 0.016 15.1 0.4 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.018 15.1 0.0 0.02 14.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain Septin PF00735.18 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.022 14.0 0.0 0.025 13.8 0.0 1.0 1 0 0 1 1 1 0 Septin SMC_N PF02463.19 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.025 14.0 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA PF00004.29 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.027 14.9 0.0 0.033 14.6 0.0 1.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Roc PF08477.13 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.032 14.5 0.0 0.036 14.3 0.0 1.1 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase RNA_helicase PF00910.22 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.032 14.6 0.2 0.051 14.0 0.2 1.4 1 1 0 1 1 1 0 RNA helicase AAA_22 PF13401.6 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.035 14.4 0.0 0.039 14.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 NODE_75323_length_209_cov_3.764368_g67382_i0reverse_frame_3 - 0.12 12.2 0.0 0.19 11.5 0.0 1.4 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation DUF4902 PF16245.5 NODE_75323_length_209_cov_3.764368_g67382_i0forward_frame_3 - 0.23 11.4 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4902) CcdB PF01845.17 NODE_75321_length_209_cov_4.683908_g67380_i0reverse_frame_3 - 0.18 12.0 0.1 0.25 11.6 0.1 1.3 1 1 0 1 1 1 0 CcdB protein Histone_H2A_C PF16211.5 NODE_75318_length_209_cov_8.448276_g67377_i0reverse_frame_3 - 0.041 13.6 3.9 0.06 13.1 3.9 1.2 1 0 0 1 1 1 0 C-terminus of histone H2A DUF5552 PF17706.1 NODE_75317_length_209_cov_14.419540_g67376_i0reverse_frame_2 - 0.053 13.2 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5552) DUF3337 PF11816.8 NODE_75315_length_209_cov_18.603448_g67374_i0forward_frame_2 - 0.15 11.9 3.1 0.16 11.8 3.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3337) MscS_TM PF12794.7 NODE_75315_length_209_cov_18.603448_g67374_i0forward_frame_2 - 2.7 6.8 4.9 2.7 6.8 4.9 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 RAMP PF04901.13 NODE_75313_length_209_cov_27.189655_g67372_i0forward_frame_3 - 0.003 17.5 0.3 0.0035 17.3 0.3 1.1 1 0 0 1 1 1 1 Receptor activity modifying family DUF3648 PF12364.8 NODE_75308_length_209_cov_30.660920_g67367_i0forward_frame_3 - 0.11 12.8 1.0 0.12 12.5 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3648) Plant_zn_clust PF10533.9 NODE_75304_length_209_cov_33.454023_g67363_i0forward_frame_3 - 0.24 11.4 6.7 5.5 7.1 0.0 2.1 2 0 0 2 2 2 0 Plant zinc cluster domain KASH PF10541.9 NODE_75303_length_209_cov_34.080460_g67362_i0reverse_frame_3 - 0.08 13.2 0.1 0.12 12.7 0.1 1.4 1 1 0 1 1 1 0 Nuclear envelope localisation domain DUF1818 PF08848.11 NODE_75303_length_209_cov_34.080460_g67362_i0reverse_frame_3 - 0.1 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1818) BTK PF00779.19 NODE_75303_length_209_cov_34.080460_g67362_i0reverse_frame_3 - 0.7 9.8 4.4 0.85 9.5 0.7 2.2 2 0 0 2 2 2 0 BTK motif Spo7 PF03907.13 NODE_75303_length_209_cov_34.080460_g67362_i0reverse_frame_2 - 0.029 13.8 0.1 0.029 13.8 0.1 1.0 1 0 0 1 1 1 0 Spo7-like protein DUF5093 PF17011.5 NODE_75303_length_209_cov_34.080460_g67362_i0reverse_frame_2 - 0.15 12.4 3.3 0.17 12.2 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5093) Babuvirus_MP PF07234.11 NODE_75302_length_209_cov_35.591954_g67361_i0reverse_frame_3 - 1.6 8.9 8.0 2.3 8.4 8.1 1.4 1 1 0 1 1 1 0 Movement and RNA silencing protein Cas_DxTHG PF09455.10 NODE_75300_length_209_cov_37.022989_g67359_i0reverse_frame_2 - 0.018 14.6 0.9 0.02 14.5 0.9 1.0 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family TilS_C PF11734.8 NODE_75299_length_209_cov_37.620690_g67358_i0reverse_frame_2 - 0.02 14.3 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 TilS substrate C-terminal domain PHtD_u1 PF16645.5 NODE_75296_length_209_cov_41.275862_g67355_i0forward_frame_2 - 0.052 14.0 0.0 0.066 13.6 0.0 1.2 1 0 0 1 1 1 0 Unstructured region on Pneumococcal histidine triad protein MYCBPAP PF14646.6 NODE_75292_length_209_cov_45.810345_g67351_i0reverse_frame_2 - 0.021 13.8 0.2 0.021 13.8 0.2 1.0 1 0 0 1 1 1 0 MYCBP-associated protein family Tricorn_PDZ PF14685.6 NODE_75289_length_209_cov_47.413793_g67348_i0reverse_frame_2 - 0.13 12.3 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Tricorn protease PDZ domain Met_asp_mut_E PF06368.11 NODE_75289_length_209_cov_47.413793_g67348_i0forward_frame_3 - 0.1 11.1 0.0 0.12 10.9 0.0 1.0 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) TEBP_beta PF07404.11 NODE_75289_length_209_cov_47.413793_g67348_i0forward_frame_2 - 0.089 12.1 0.0 0.098 12.0 0.0 1.0 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) Gene66 PF02053.15 NODE_75284_length_209_cov_52.218391_g67343_i0reverse_frame_3 - 0.091 12.4 0.2 0.092 12.4 0.2 1.1 1 0 0 1 1 1 0 Gene 66 (IR5) protein UPF0179 PF03684.13 NODE_75284_length_209_cov_52.218391_g67343_i0forward_frame_2 - 0.15 12.0 0.9 0.25 11.2 0.9 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0179) FNIP PF05725.12 NODE_75281_length_209_cov_53.017241_g67340_i0forward_frame_3 - 4.3e-09 36.4 0.1 5e-09 36.2 0.1 1.1 1 0 0 1 1 1 1 FNIP Repeat Retrotrans_gag PF03732.17 NODE_75276_length_209_cov_63.425287_g67335_i0reverse_frame_2 - 0.087 13.1 0.3 0.2 12.0 0.3 1.6 1 1 1 2 2 2 0 Retrotransposon gag protein YkuD_2 PF13645.6 NODE_75272_length_209_cov_64.959770_g67331_i0forward_frame_2 - 0.091 12.2 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 L,D-transpeptidase catalytic domain PdxJ PF03740.13 NODE_75267_length_209_cov_70.471264_g67326_i0forward_frame_3 - 0.051 12.7 0.0 0.052 12.6 0.0 1.0 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthesis protein PdxJ Adeno_E3_CR2 PF02439.15 NODE_75266_length_209_cov_77.867816_g67325_i0reverse_frame_2 - 0.04 13.7 1.1 0.066 13.0 1.1 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 DUF4763 PF15960.5 NODE_75263_length_209_cov_84.149425_g67322_i0forward_frame_3 - 0.014 14.7 0.0 0.014 14.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) Amino_oxidase PF01593.24 NODE_75262_length_209_cov_91.977011_g67321_i0reverse_frame_2 - 0.00089 18.7 0.1 0.0011 18.3 0.1 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Seadorna_Vp10 PF07322.11 NODE_75256_length_209_cov_145.948276_g67315_i0forward_frame_3 - 0.092 12.1 0.2 0.088 12.2 0.2 1.2 1 0 0 1 1 1 0 Seadornavirus Vp10 DUF241 PF03087.14 NODE_75253_length_209_cov_217.885057_g67312_i0reverse_frame_3 - 0.11 12.3 1.7 0.11 12.3 1.7 1.1 1 0 0 1 1 1 0 Arabidopsis protein of unknown function HemY_N PF07219.13 NODE_75253_length_209_cov_217.885057_g67312_i0forward_frame_2 - 0.48 10.6 1.6 0.61 10.3 1.6 1.1 1 0 0 1 1 1 0 HemY protein N-terminus TetR_C_32 PF09209.11 NODE_75252_length_209_cov_218.482759_g67311_i0forward_frame_2 - 0.0039 17.2 0.1 0.0045 17.0 0.1 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain Dicistro_VP4 PF11492.8 NODE_75250_length_209_cov_240.224138_g67309_i0forward_frame_3 - 0.17 11.9 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 Cricket paralysis virus, VP4 Rsm1 PF08600.10 NODE_75248_length_209_cov_371.333333_g67307_i0reverse_frame_3 - 0.083 13.1 0.0 0.085 13.0 0.0 1.2 1 0 0 1 1 1 0 Rsm1-like DUF5561 PF17716.1 NODE_75248_length_209_cov_371.333333_g67307_i0reverse_frame_2 - 0.072 12.4 0.1 0.08 12.2 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5561) zf-H2C2_2 PF13465.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 1.1e-17 63.6 9.1 1.3e-10 41.2 1.4 2.1 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2 PF00096.26 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 6e-09 35.9 12.6 1.3e-06 28.6 0.5 3.1 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 6e-07 29.8 13.1 3.6e-05 24.2 0.7 3.1 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_5 PF13909.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.00035 20.3 0.4 0.00035 20.3 0.4 3.4 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_11 PF16622.5 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0006 19.5 5.4 0.063 13.0 0.2 2.2 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-BED PF02892.15 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0052 16.8 9.0 0.063 13.3 2.4 2.2 1 1 1 2 2 2 2 BED zinc finger zf-met PF12874.7 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0063 16.9 5.2 0.026 14.9 0.7 2.4 2 0 0 2 2 2 1 Zinc-finger of C2H2 type DUF2225 PF09986.9 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0066 16.2 4.3 0.0078 16.0 4.3 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2225) BolA PF01722.18 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.0083 16.4 0.2 0.018 15.3 0.2 1.6 1 1 1 2 2 2 1 BolA-like protein Zf_RING PF16744.5 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.013 15.6 3.6 0.036 14.2 1.8 2.0 1 1 1 2 2 2 0 KIAA1045 RING finger MRNIP PF15749.5 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.066 13.9 9.6 0.74 10.6 1.1 2.1 1 1 1 2 2 2 0 MRN-interacting protein DUF5479 PF17575.2 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.072 13.6 0.7 0.11 13.0 0.7 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5479) zf-C2HC_2 PF13913.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.086 12.8 0.9 0.086 12.8 0.9 2.6 3 1 0 3 3 3 0 zinc-finger of a C2HC-type zf-C2H2_3rep PF18868.1 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.11 13.2 3.7 27 5.4 0.4 1.8 1 1 0 1 1 1 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_6 PF13912.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.13 12.3 6.0 0.46 10.6 0.2 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.15 12.3 9.1 0.4 11.0 0.4 2.9 2 1 1 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-C2H2_8 PF15909.5 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.21 11.9 5.4 0.085 13.2 1.9 1.7 1 1 0 1 1 1 0 C2H2-type zinc ribbon zf-CCHC_2 PF13696.6 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.77 9.6 4.9 5 7.0 1.1 2.2 2 0 0 2 2 2 0 Zinc knuckle Desulfoferrod_N PF06397.12 NODE_75245_length_209_cov_805.672414_g67304_i0reverse_frame_3 - 0.9 9.2 3.6 5.8 6.6 0.2 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain MHC_I_C PF06623.11 NODE_75243_length_209_cov_986.132184_g67302_i0reverse_frame_2 - 0.13 12.2 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 MHC_I C-terminus EIF4E-T PF10477.9 NODE_75243_length_209_cov_986.132184_g67302_i0reverse_frame_2 - 0.14 10.9 0.1 0.14 10.9 0.1 1.0 1 0 0 1 1 1 0 Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E DUF1143 PF06608.11 NODE_75242_length_209_cov_7808.229885_g67301_i0reverse_frame_3 - 0.015 15.4 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) zf-FLZ PF04570.14 NODE_75238_length_210_cov_0.777143_g67297_i0reverse_frame_3 - 0.024 14.1 0.8 0.036 13.6 0.8 1.3 1 0 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 PT PF04886.12 NODE_75237_length_210_cov_0.828571_g67296_i0reverse_frame_2 - 0.0056 16.2 1.2 1.1 8.8 0.1 2.3 2 0 0 2 2 2 2 PT repeat Smoa_sbd PF17885.1 NODE_75236_length_210_cov_0.874286_g67295_i0forward_frame_2 - 0.1 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Styrene monooxygenase A putative substrate binding domain Phage_fiber PF03335.13 NODE_75229_length_210_cov_0.908571_g67288_i0reverse_frame_2 - 4.7 7.6 11.4 1.3 9.3 0.6 2.6 2 0 0 2 2 2 0 Phage tail fibre repeat DUF2633 PF11119.8 NODE_75229_length_210_cov_0.908571_g67288_i0forward_frame_2 - 3.3 7.7 4.1 3.7 7.5 2.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2633) Multi-haem_cyto PF13447.6 NODE_75228_length_210_cov_0.908571_g67287_i0reverse_frame_2 - 0.022 14.0 0.9 0.025 13.8 0.9 1.0 1 0 0 1 1 1 0 Seven times multi-haem cytochrome CxxCH PAX PF00292.18 NODE_75225_length_210_cov_0.908571_g67284_i0forward_frame_2 - 0.077 12.9 0.0 0.089 12.7 0.0 1.1 1 0 0 1 1 1 0 'Paired box' domain Mlo PF03094.15 NODE_75222_length_210_cov_0.914286_g67281_i0forward_frame_2 - 0.11 10.9 1.5 0.11 10.9 1.5 1.0 1 0 0 1 1 1 0 Mlo family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks393.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks393.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks393.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks393.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3915 PF13054.6 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_3 - 0.16 12.0 0.8 0.19 11.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_75220_length_210_cov_0.914286_g67279_i0reverse_frame_3 - 0.35 9.1 2.1 0.34 9.1 2.1 1.0 1 0 0 1 1 1 0 Atrophin-1 family Acyl-CoA_ox_N PF14749.6 NODE_75219_length_210_cov_0.914286_g67278_i0forward_frame_2 - 0.00066 20.2 0.0 0.00075 20.0 0.0 1.0 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal DUF4096 PF13340.6 NODE_75217_length_210_cov_0.914286_g67276_i0reverse_frame_2 - 0.095 12.9 0.1 0.1 12.9 0.1 1.2 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) MASE4 PF17158.4 NODE_75214_length_210_cov_0.914286_g67273_i0reverse_frame_2 - 0.0039 16.5 4.1 0.0041 16.4 4.1 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain MASE3 PF17159.4 NODE_75214_length_210_cov_0.914286_g67273_i0reverse_frame_2 - 0.01 15.5 3.5 0.011 15.4 3.5 1.2 1 0 0 1 1 1 0 Membrane-associated sensor domain Acyl_transf_3 PF01757.22 NODE_75214_length_210_cov_0.914286_g67273_i0reverse_frame_2 - 0.018 14.1 4.0 0.02 13.9 4.0 1.0 1 0 0 1 1 1 0 Acyltransferase family Glyco_transf_22 PF03901.17 NODE_75214_length_210_cov_0.914286_g67273_i0reverse_frame_2 - 0.022 14.0 3.5 0.023 13.9 3.5 1.0 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family YlaC PF10777.9 NODE_75214_length_210_cov_0.914286_g67273_i0reverse_frame_2 - 0.025 14.4 2.2 0.029 14.2 2.2 1.1 1 0 0 1 1 1 0 Inner membrane protein YlaC SNAD1 PF18744.1 NODE_75212_length_210_cov_0.914286_g67271_i0reverse_frame_3 - 0.018 14.9 0.0 0.019 14.8 0.0 1.0 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 1 DUF4113 PF13438.6 NODE_75212_length_210_cov_0.914286_g67271_i0reverse_frame_3 - 5.4 7.2 7.1 1.1 9.3 0.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4113) Ten1_2 PF15490.6 NODE_75210_length_210_cov_0.914286_g67269_i0reverse_frame_2 - 0.019 14.6 0.0 0.022 14.5 0.0 1.0 1 0 0 1 1 1 0 Telomere-capping, CST complex subunit DUF2290 PF10053.9 NODE_75207_length_210_cov_0.920000_g67266_i0reverse_frame_3 - 0.013 15.0 0.0 0.014 14.8 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2290) Stomoxyn PF11585.8 NODE_75205_length_210_cov_0.948571_g67264_i0reverse_frame_3 - 0.13 12.3 0.3 0.19 11.8 0.3 1.3 1 0 0 1 1 1 0 Insect antimicrobial peptide, stomoxyn SdrG_C_C PF10425.9 NODE_75205_length_210_cov_0.948571_g67264_i0reverse_frame_2 - 0.012 15.7 0.2 0.012 15.7 0.2 1.0 1 0 0 1 1 1 0 C-terminus of bacterial fibrinogen-binding adhesin CLU_N PF15044.6 NODE_75205_length_210_cov_0.948571_g67264_i0reverse_frame_2 - 0.029 14.7 0.2 0.035 14.5 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial function, CLU-N-term B3_4 PF03483.17 NODE_75204_length_210_cov_0.965714_g67263_i0forward_frame_2 - 0.034 13.8 0.4 0.042 13.5 0.4 1.3 1 1 0 1 1 1 0 B3/4 domain MSC PF09402.10 NODE_75202_length_210_cov_0.977143_g67261_i0reverse_frame_2 - 9.5e-05 22.0 0.7 9.5e-05 22.0 0.7 1.1 1 0 0 1 1 1 1 Man1-Src1p-C-terminal domain VID27 PF08553.10 NODE_75201_length_210_cov_0.994286_g67260_i0reverse_frame_2 - 0.28 10.2 0.0 0.29 10.1 0.0 1.0 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain Sigma_reg_N PF13800.6 NODE_75197_length_210_cov_1.051429_g67256_i0forward_frame_3 - 0.14 12.4 0.5 0.16 12.2 0.5 1.1 1 0 0 1 1 1 0 Sigma factor regulator N-terminal LptF_LptG PF03739.14 NODE_75197_length_210_cov_1.051429_g67256_i0forward_frame_3 - 0.39 9.5 1.9 0.4 9.5 1.9 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Ge1_WD40 PF16529.5 NODE_75196_length_210_cov_1.057143_g67255_i0reverse_frame_3 - 0.11 11.4 0.7 0.099 11.6 0.7 1.1 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Abhydrolase_3 PF07859.13 NODE_75195_length_210_cov_1.057143_g67254_i0reverse_frame_3 - 0.012 15.5 0.1 0.014 15.3 0.1 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold COesterase PF00135.28 NODE_75195_length_210_cov_1.057143_g67254_i0reverse_frame_3 - 0.15 10.9 0.0 0.15 10.9 0.0 1.0 1 0 0 1 1 1 0 Carboxylesterase family WRKY PF03106.15 NODE_75191_length_210_cov_1.080000_g67250_i0forward_frame_3 - 0.09 13.0 0.2 0.63 10.3 0.1 2.0 2 0 0 2 2 2 0 WRKY DNA -binding domain DUF2703 PF10865.8 NODE_75189_length_210_cov_1.097143_g67248_i0forward_frame_2 - 0.041 14.1 0.0 0.048 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) Aconitase PF00330.20 NODE_75188_length_210_cov_1.097143_g67247_i0forward_frame_3 - 1.2e-31 110.2 1.4 1.3e-31 110.1 1.4 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Pep1_7 PF17232.2 NODE_75181_length_210_cov_1.137143_g67240_i0reverse_frame_3 - 0.13 12.8 0.4 0.2 12.2 0.4 1.3 1 0 0 1 1 1 0 Elicitor peptide 1-7 CDO_I PF05995.12 NODE_75181_length_210_cov_1.137143_g67240_i0reverse_frame_3 - 0.26 10.6 2.0 0.26 10.6 1.3 1.4 1 1 0 1 1 1 0 Cysteine dioxygenase type I CAF1 PF04857.20 NODE_75180_length_210_cov_1.137143_g67239_i0forward_frame_2 - 6.4e-12 45.3 0.0 6.7e-12 45.2 0.0 1.0 1 0 0 1 1 1 1 CAF1 family ribonuclease TraL PF07178.11 NODE_75177_length_210_cov_1.142857_g67236_i0reverse_frame_2 - 0.0054 17.2 0.0 0.0065 16.9 0.0 1.1 1 0 0 1 1 1 1 TraL protein Peptidase_C2 PF00648.21 NODE_75175_length_210_cov_1.142857_g67234_i0reverse_frame_3 - 8.9e-15 54.5 0.0 1e-14 54.3 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease C2 PF00168.30 NODE_75174_length_210_cov_1.142857_g67233_i0reverse_frame_3 - 0.00087 19.5 0.0 0.00098 19.4 0.0 1.1 1 0 0 1 1 1 1 C2 domain CcmB PF03379.13 NODE_75161_length_210_cov_1.228571_g67220_i0forward_frame_3 - 0.18 11.3 0.0 0.2 11.1 0.0 1.0 1 0 0 1 1 1 0 CcmB protein O-ag_pol_Wzy PF14296.6 NODE_75156_length_210_cov_1.262857_g67215_i0forward_frame_2 - 0.042 12.5 3.9 0.047 12.3 3.9 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy SerH PF06873.11 NODE_75155_length_210_cov_1.262857_g67214_i0reverse_frame_3 - 0.031 13.1 0.7 0.035 12.9 0.7 1.0 1 0 0 1 1 1 0 Cell surface immobilisation antigen SerH Alg14 PF08660.11 NODE_75152_length_210_cov_1.337143_g67211_i0reverse_frame_3 - 0.024 14.6 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like Pkinase PF00069.25 NODE_75152_length_210_cov_1.337143_g67211_i0forward_frame_2 - 4.6e-13 49.1 0.0 5.4e-13 48.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_75152_length_210_cov_1.337143_g67211_i0forward_frame_2 - 0.001 18.4 0.0 0.0012 18.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Peptidase_S78 PF04586.17 NODE_75151_length_210_cov_1.342857_g67210_i0forward_frame_2 - 0.086 13.0 0.0 0.091 12.9 0.0 1.0 1 0 0 1 1 1 0 Caudovirus prohead serine protease PALB2_WD40 PF16756.5 NODE_75150_length_210_cov_1.348571_g67209_i0reverse_frame_3 - 0.027 13.4 0.1 0.032 13.1 0.1 1.0 1 0 0 1 1 1 0 Partner and localizer of BRCA2 WD40 domain DUF1655 PF07868.11 NODE_75149_length_210_cov_1.354286_g67208_i0forward_frame_3 - 0.033 14.2 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1655) Cellulose_synt PF03552.14 NODE_75148_length_210_cov_1.360000_g67207_i0reverse_frame_3 - 0.11 10.9 0.0 0.13 10.8 0.0 1.0 1 0 0 1 1 1 0 Cellulose synthase zf-UBP_var PF17807.1 NODE_75144_length_210_cov_1.365714_g67203_i0forward_frame_2 - 0.0044 16.7 0.2 0.0058 16.4 0.2 1.2 1 0 0 1 1 1 1 Variant UBP zinc finger DUF2401 PF10287.9 NODE_75140_length_210_cov_1.365714_g67199_i0reverse_frame_2 - 0.027 14.0 0.8 0.029 14.0 0.8 1.0 1 0 0 1 1 1 0 Putative TOS1-like glycosyl hydrolase (DUF2401) PsbI PF02532.14 NODE_75137_length_210_cov_1.371429_g67196_i0reverse_frame_2 - 0.17 11.9 0.9 0.17 11.9 0.9 2.4 3 0 0 3 3 3 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) Caskin-Pro-rich PF16907.5 NODE_75133_length_210_cov_1.371429_g67192_i0reverse_frame_2 - 0.077 13.5 2.7 0.09 13.3 2.7 1.1 1 0 0 1 1 1 0 Proline rich region of Caskin proteins DUF1505 PF07403.11 NODE_75131_length_210_cov_1.371429_g67190_i0forward_frame_3 - 0.093 12.9 0.3 0.13 12.5 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) SAMP PF05924.11 NODE_75131_length_210_cov_1.371429_g67190_i0forward_frame_2 - 0.022 14.1 0.2 0.036 13.3 0.2 1.3 1 0 0 1 1 1 0 SAMP Motif Tim17 PF02466.19 NODE_75128_length_210_cov_1.371429_g67187_i0reverse_frame_3 - 0.11 12.9 2.6 0.39 11.1 2.6 1.8 1 1 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family Yae1_N PF09811.9 NODE_75128_length_210_cov_1.371429_g67187_i0reverse_frame_3 - 1 9.1 7.8 5.9 6.7 3.2 2.8 2 1 0 2 2 2 0 Essential protein Yae1, N terminal DUF883 PF05957.13 NODE_75128_length_210_cov_1.371429_g67187_i0reverse_frame_3 - 5.2 7.7 5.7 12 6.5 0.9 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) PilP PF04351.13 NODE_75128_length_210_cov_1.371429_g67187_i0forward_frame_3 - 5.1 7.0 6.1 5.8 6.9 6.1 1.1 1 0 0 1 1 1 0 Pilus assembly protein, PilP HCBP_related PF06594.11 NODE_75124_length_210_cov_1.382857_g67183_i0reverse_frame_2 - 0.08 12.9 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Haemolysin-type calcium binding protein related domain Ribonuc_2-5A PF06479.12 NODE_75124_length_210_cov_1.382857_g67183_i0forward_frame_2 - 0.029 14.6 0.1 0.033 14.4 0.1 1.0 1 0 0 1 1 1 0 Ribonuclease 2-5A EGF_3 PF12947.7 NODE_75121_length_210_cov_1.428571_g67180_i0reverse_frame_2 - 0.18 12.0 1.9 0.35 11.1 0.3 2.1 2 0 0 2 2 2 0 EGF domain Edc3_linker PF16598.5 NODE_75115_length_210_cov_1.445714_g67174_i0forward_frame_3 - 0.009 16.7 0.0 0.0096 16.6 0.0 1.0 1 0 0 1 1 1 1 Linker region of enhancer of mRNA-decapping protein 3 DCAF15_WD40 PF14939.6 NODE_75114_length_210_cov_1.445714_g67173_i0forward_frame_3 - 0.075 12.7 0.9 0.08 12.6 0.9 1.0 1 0 0 1 1 1 0 DDB1-and CUL4-substrate receptor 15, WD repeat JmjN PF02375.17 NODE_75113_length_210_cov_1.451429_g67172_i0forward_frame_2 - 0.14 12.1 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 jmjN domain CheR_N PF03705.15 NODE_75101_length_210_cov_1.525714_g67160_i0reverse_frame_3 - 0.019 14.7 0.1 0.031 14.0 0.1 1.4 1 0 0 1 1 1 0 CheR methyltransferase, all-alpha domain Thionin PF00321.17 NODE_75099_length_210_cov_1.537143_g67158_i0forward_frame_2 - 0.067 13.7 2.4 0.09 13.3 2.4 1.2 1 0 0 1 1 1 0 Plant thionin POTRA_TamA_1 PF17243.2 NODE_75098_length_210_cov_1.548571_g67157_i0forward_frame_3 - 0.11 12.6 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 POTRA domain TamA domain 1 TRAM1 PF08390.11 NODE_75097_length_210_cov_1.554286_g67156_i0reverse_frame_3 - 0.14 11.8 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 TRAM1-like protein F-box-like PF12937.7 NODE_75097_length_210_cov_1.554286_g67156_i0forward_frame_3 - 0.00066 19.5 0.0 0.00094 19.0 0.0 1.3 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 NODE_75097_length_210_cov_1.554286_g67156_i0forward_frame_3 - 0.013 15.4 0.1 0.024 14.5 0.0 1.5 2 0 0 2 2 2 0 F-box domain Chlam_OMP3 PF03503.13 NODE_75094_length_210_cov_1.571429_g67153_i0reverse_frame_3 - 0.016 15.5 0.2 0.016 15.5 0.2 2.1 1 1 1 2 2 2 0 Chlamydia cysteine-rich outer membrane protein 3 Lamprin PF06403.11 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_3 - 0.01 15.8 3.4 0.01 15.8 3.4 2.0 1 1 1 2 2 2 0 Lamprin Chorion_1 PF01723.16 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_3 - 1.6 8.6 5.6 5.8 6.8 5.6 1.8 1 1 0 1 1 1 0 Chorion protein Lamprin PF06403.11 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_2 - 1.4 8.8 7.2 1.3 9.0 2.1 2.0 1 1 1 2 2 2 0 Lamprin DUF2788 PF10981.8 NODE_75093_length_210_cov_1.582857_g67152_i0forward_frame_2 - 9.5 6.3 17.3 6.2 6.9 2.9 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF2788) Metaviral_G PF09595.10 NODE_75089_length_210_cov_1.600000_g67148_i0forward_frame_2 - 0.051 13.7 1.9 0.055 13.6 1.9 1.0 1 0 0 1 1 1 0 Metaviral_G glycoprotein Toxin_37 PF11415.8 NODE_75085_length_210_cov_1.605714_g67144_i0reverse_frame_3 - 0.0078 16.0 6.7 0.012 15.4 6.7 1.3 1 0 0 1 1 1 1 Antifungal peptide termicin SNN_cytoplasm PF09051.10 NODE_75084_length_210_cov_1.611429_g67143_i0forward_frame_3 - 0.056 13.3 0.0 0.077 12.8 0.0 1.2 1 0 0 1 1 1 0 Stannin cytoplasmic Pkinase PF00069.25 NODE_75078_length_210_cov_1.651429_g67137_i0reverse_frame_3 - 8.8e-12 44.9 0.1 1.1e-11 44.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_75078_length_210_cov_1.651429_g67137_i0reverse_frame_3 - 2.9e-07 30.0 0.0 3.4e-07 29.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Axin_b-cat_bind PF08833.10 NODE_75074_length_210_cov_1.702857_g67133_i0reverse_frame_3 - 0.032 14.3 2.2 0.18 12.0 0.1 2.1 1 1 1 2 2 2 0 Axin beta-catenin binding domain Cmc1 PF08583.10 NODE_75074_length_210_cov_1.702857_g67133_i0reverse_frame_3 - 0.072 13.1 0.1 0.088 12.8 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like DUF5506 PF17611.2 NODE_75072_length_210_cov_1.714286_g67131_i0forward_frame_3 - 0.078 12.9 1.0 0.081 12.8 1.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5506) DUF1732 PF08340.11 NODE_75068_length_210_cov_1.771429_g67127_i0forward_frame_3 - 0.13 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1732) Ribosomal_S17 PF00366.20 NODE_75066_length_210_cov_1.777143_g67125_i0reverse_frame_2 - 0.13 12.4 0.1 0.68 10.1 0.1 1.9 1 1 0 1 1 1 0 Ribosomal protein S17 HECT PF00632.25 NODE_75065_length_210_cov_1.777143_g67124_i0reverse_frame_2 - 6.8e-13 48.8 0.1 7.1e-13 48.7 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) zf-CCCH_4 PF18044.1 NODE_75062_length_210_cov_1.794286_g67121_i0forward_frame_3 - 0.31 10.9 0.4 0.31 10.9 0.4 1.7 2 0 0 2 2 2 0 CCCH-type zinc finger Levi_coat PF01819.17 NODE_75061_length_210_cov_1.800000_g67120_i0reverse_frame_3 - 0.16 12.0 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Levivirus coat protein LIM PF00412.22 NODE_75060_length_210_cov_1.800000_g67119_i0reverse_frame_2 - 0.076 13.3 3.6 0.11 12.7 3.6 1.3 1 0 0 1 1 1 0 LIM domain Pox_J1 PF03338.15 NODE_75057_length_210_cov_1.811429_g67116_i0reverse_frame_3 - 0.037 13.9 0.1 0.045 13.6 0.1 1.1 1 0 0 1 1 1 0 Poxvirus J1 protein Med17 PF10156.9 NODE_75057_length_210_cov_1.811429_g67116_i0forward_frame_3 - 0.015 14.0 0.0 0.016 14.0 0.0 1.0 1 0 0 1 1 1 0 Subunit 17 of Mediator complex TRP PF06011.12 NODE_75056_length_210_cov_1.811429_g67115_i0reverse_frame_3 - 0.0026 16.5 1.5 0.0031 16.3 1.5 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Rnf-Nqr PF02508.14 NODE_75050_length_210_cov_1.828571_g67109_i0forward_frame_2 - 0.0085 16.1 0.2 0.0085 16.1 0.2 1.1 1 0 0 1 1 1 1 Rnf-Nqr subunit, membrane protein IlvN PF07991.12 NODE_75047_length_210_cov_1.857143_g67106_i0reverse_frame_3 - 0.15 11.6 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain VSP PF03302.13 NODE_75047_length_210_cov_1.857143_g67106_i0forward_frame_3 - 0.0023 16.9 5.7 0.0027 16.6 5.7 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein Laminin_EGF PF00053.24 NODE_75047_length_210_cov_1.857143_g67106_i0forward_frame_3 - 0.028 14.6 13.7 0.098 12.8 13.7 1.8 1 1 0 1 1 1 0 Laminin EGF domain DUF4215 PF13948.6 NODE_75047_length_210_cov_1.857143_g67106_i0forward_frame_3 - 0.031 14.7 16.5 0.043 14.3 16.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4215) RST PF12174.8 NODE_75044_length_210_cov_1.891429_g67103_i0reverse_frame_3 - 0.11 12.4 0.3 0.21 11.5 0.2 1.5 1 1 1 2 2 2 0 RCD1-SRO-TAF4 (RST) plant domain zf-Sec23_Sec24 PF04810.15 NODE_75042_length_210_cov_1.914286_g67101_i0reverse_frame_2 - 0.46 10.6 2.8 5.5 7.1 1.3 2.2 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger Molydop_binding PF01568.21 NODE_75042_length_210_cov_1.914286_g67101_i0forward_frame_3 - 0.082 12.9 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain Pentapeptide_4 PF13599.6 NODE_75041_length_210_cov_1.920000_g67100_i0forward_frame_2 - 0.036 14.2 1.3 0.05 13.8 1.3 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) DUF1497 PF07384.11 NODE_75039_length_210_cov_1.942857_g67098_i0reverse_frame_3 - 0.023 15.1 0.2 0.033 14.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1497) DUF4378 PF14309.6 NODE_75037_length_210_cov_1.960000_g67096_i0reverse_frame_3 - 0.15 12.4 0.0 0.16 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4378) G6PD_N PF00479.22 NODE_75037_length_210_cov_1.960000_g67096_i0forward_frame_2 - 1.2e-15 58.6 0.0 1.4e-15 58.4 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain G6PD_C PF02781.16 NODE_75037_length_210_cov_1.960000_g67096_i0forward_frame_2 - 8.6e-05 21.9 0.2 0.00012 21.4 0.2 1.2 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain LPD14 PF18827.1 NODE_75037_length_210_cov_1.960000_g67096_i0forward_frame_2 - 0.11 12.7 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 14 Spc24 PF08286.11 NODE_75035_length_210_cov_1.971429_g67094_i0forward_frame_2 - 0.026 14.7 0.1 0.031 14.5 0.1 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 Lzipper-MIP1 PF14389.6 NODE_75034_length_210_cov_1.977143_g67093_i0reverse_frame_3 - 0.11 12.8 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 BmKX PF09132.10 NODE_75034_length_210_cov_1.977143_g67093_i0forward_frame_2 - 0.12 12.4 0.1 0.12 12.4 0.1 1.9 3 0 0 3 3 3 0 BmKX DUF5472 PF17566.2 NODE_75033_length_210_cov_2.000000_g67092_i0reverse_frame_3 - 0.063 13.3 0.1 0.072 13.1 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) Rep_2 PF01719.17 NODE_75033_length_210_cov_2.000000_g67092_i0reverse_frame_3 - 0.14 12.0 0.1 0.16 11.8 0.1 1.1 1 0 0 1 1 1 0 Plasmid replication protein SHE3 PF17078.5 NODE_75029_length_210_cov_2.045714_g67088_i0reverse_frame_3 - 0.0094 15.7 2.2 0.0096 15.7 2.2 1.1 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Tic22 PF04278.12 NODE_75029_length_210_cov_2.045714_g67088_i0reverse_frame_3 - 0.023 14.1 0.3 0.024 14.0 0.3 1.1 1 0 0 1 1 1 0 Tic22-like family DUF1717 PF05414.11 NODE_75029_length_210_cov_2.045714_g67088_i0reverse_frame_3 - 0.084 13.3 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Viral domain of unknown function (DUF1717) Attachment_P66 PF11263.8 NODE_75028_length_210_cov_2.051429_g67087_i0forward_frame_2 - 0.024 13.9 0.0 0.027 13.7 0.0 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi attachment protein P66 LPD16 PF18830.1 NODE_75021_length_210_cov_2.154286_g67080_i0reverse_frame_3 - 0.038 13.9 0.0 0.041 13.8 0.0 1.2 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 16 SieB PF14163.6 NODE_75020_length_210_cov_2.154286_g67079_i0reverse_frame_3 - 0.0057 16.2 2.0 0.0068 15.9 2.0 1.1 1 0 0 1 1 1 1 Super-infection exclusion protein B Jak1_Phl PF17887.1 NODE_75020_length_210_cov_2.154286_g67079_i0reverse_frame_2 - 0.037 14.0 1.0 0.04 13.9 1.0 1.0 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain TcpE PF12648.7 NODE_75020_length_210_cov_2.154286_g67079_i0forward_frame_3 - 0.033 14.7 5.8 0.036 14.6 5.8 1.0 1 0 0 1 1 1 0 TcpE family DUF3791 PF12668.7 NODE_75019_length_210_cov_2.165714_g67078_i0forward_frame_2 - 0.074 13.1 0.2 0.095 12.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3791) Usher PF00577.20 NODE_75016_length_210_cov_2.177143_g67075_i0reverse_frame_2 - 6.3e-14 51.7 1.2 6.3e-14 51.7 1.2 1.0 1 0 0 1 1 1 1 Outer membrane usher protein zf-CCCH PF00642.24 NODE_75015_length_210_cov_2.182857_g67074_i0reverse_frame_2 - 0.00051 19.9 13.2 0.0015 18.4 6.9 2.2 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 NODE_75015_length_210_cov_2.182857_g67074_i0reverse_frame_2 - 0.45 10.7 14.5 0.65 10.1 5.3 3.0 2 1 1 3 3 3 0 Zinc finger domain Torus PF16131.5 NODE_75015_length_210_cov_2.182857_g67074_i0reverse_frame_2 - 1 10.1 6.5 0.18 12.5 2.4 1.7 1 1 1 2 2 2 0 Torus domain CytB6-F_Fe-S PF08802.10 NODE_75015_length_210_cov_2.182857_g67074_i0forward_frame_3 - 0.069 13.2 0.5 0.12 12.4 0.5 1.3 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit DUF3339 PF11820.8 NODE_75013_length_210_cov_2.222857_g67072_i0reverse_frame_3 - 0.034 14.3 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3339) mRNA_decap_C PF16741.5 NODE_75012_length_210_cov_2.222857_g67071_i0reverse_frame_3 - 0.035 13.4 0.2 0.057 12.7 0.0 1.5 2 0 0 2 2 2 0 mRNA-decapping enzyme C-terminus Acetyltransf_4 PF13420.7 NODE_75008_length_210_cov_2.280000_g67067_i0reverse_frame_3 - 0.1 12.7 0.1 0.13 12.4 0.1 1.0 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DIL PF01843.19 NODE_75008_length_210_cov_2.280000_g67067_i0forward_frame_2 - 0.063 13.5 0.1 0.074 13.3 0.1 1.2 1 0 0 1 1 1 0 DIL domain LexA_DNA_bind PF01726.16 NODE_75007_length_210_cov_2.280000_g67066_i0forward_frame_2 - 0.032 14.0 0.0 0.05 13.4 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain DLEU7 PF15760.5 NODE_75003_length_210_cov_2.325714_g67062_i0forward_frame_3 - 0.91 9.0 3.4 0.96 8.9 3.4 1.0 1 0 0 1 1 1 0 Leukemia-associated protein 7 zf-CCHC PF00098.23 NODE_75001_length_210_cov_2.342857_g67060_i0forward_frame_3 - 0.0019 18.2 1.5 0.0026 17.7 1.5 1.2 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 NODE_75001_length_210_cov_2.342857_g67060_i0forward_frame_3 - 0.051 13.4 1.8 0.073 12.9 1.8 1.3 1 0 0 1 1 1 0 Zinc knuckle Axin_b-cat_bind PF08833.10 NODE_75001_length_210_cov_2.342857_g67060_i0forward_frame_3 - 0.086 13.0 0.5 0.12 12.5 0.5 1.3 1 0 0 1 1 1 0 Axin beta-catenin binding domain DUF423 PF04241.15 NODE_74992_length_210_cov_2.497143_g67051_i0reverse_frame_2 - 0.061 13.5 0.8 0.086 13.1 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF423) DUF3519 PF12033.8 NODE_74989_length_210_cov_2.571429_g67048_i0reverse_frame_3 - 0.023 15.1 0.2 0.023 15.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3519) MASE4 PF17158.4 NODE_74988_length_210_cov_2.628571_g67047_i0reverse_frame_3 - 0.0021 17.4 4.9 0.0024 17.2 4.9 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain Resolvase PF00239.21 NODE_74984_length_210_cov_2.725714_g67043_i0forward_frame_2 - 4.6e-09 36.5 0.5 5.5e-09 36.3 0.5 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain IgG_binding_B PF01378.17 NODE_74984_length_210_cov_2.725714_g67043_i0forward_frame_2 - 0.061 13.4 0.6 0.096 12.8 0.4 1.4 1 1 0 1 1 1 0 B domain F-box-like PF12937.7 NODE_74981_length_210_cov_2.805714_g67040_i0forward_frame_2 - 0.051 13.5 0.3 0.086 12.8 0.2 1.6 1 1 0 1 1 1 0 F-box-like ATP13 PF12921.7 NODE_74979_length_210_cov_2.971429_g67038_i0reverse_frame_3 - 0.1 12.5 0.1 0.15 11.9 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial ATPase expression Pox_F11 PF04943.12 NODE_74979_length_210_cov_2.971429_g67038_i0forward_frame_2 - 0.1 11.6 0.1 0.12 11.4 0.1 1.0 1 0 0 1 1 1 0 Poxvirus F11 protein ATPase-cat_bd PF12156.8 NODE_74977_length_210_cov_3.462857_g67036_i0reverse_frame_2 - 0.0022 18.7 4.3 0.0026 18.4 4.3 1.1 1 0 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase Pkinase PF00069.25 NODE_74971_length_210_cov_3.845714_g67030_i0reverse_frame_3 - 4.5e-15 55.7 0.0 4.5e-15 55.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_74971_length_210_cov_3.845714_g67030_i0reverse_frame_3 - 1.8e-05 24.2 0.0 1.8e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_74971_length_210_cov_3.845714_g67030_i0reverse_frame_3 - 0.037 13.4 0.0 0.038 13.3 0.0 1.1 1 0 0 1 1 1 0 Kinase-like LSDAT_prok PF18171.1 NODE_74971_length_210_cov_3.845714_g67030_i0forward_frame_3 - 0.066 12.4 0.0 0.078 12.2 0.0 1.0 1 0 0 1 1 1 0 SLOG in TRPM, prokaryote MORN PF02493.20 NODE_74970_length_210_cov_4.348571_g67029_i0forward_frame_3 - 2.1e-16 58.7 17.7 2.2e-06 27.2 0.7 3.1 3 0 0 3 3 3 3 MORN repeat SWIB PF02201.18 NODE_74969_length_210_cov_7.485714_g67028_i0forward_frame_2 - 0.022 14.6 0.5 0.03 14.2 0.5 1.3 1 1 0 1 1 1 0 SWIB/MDM2 domain IncD PF17628.2 NODE_74968_length_210_cov_15.068571_g67027_i0reverse_frame_3 - 1.8 8.4 6.3 2.2 8.1 6.3 1.1 1 0 0 1 1 1 0 Inclusion membrane protein D Lipin_N PF04571.14 NODE_74966_length_210_cov_16.725714_g67025_i0reverse_frame_3 - 0.037 14.0 0.1 0.05 13.6 0.1 1.3 1 1 0 1 1 1 0 lipin, N-terminal conserved region DUF3796 PF12676.7 NODE_74965_length_210_cov_16.845714_g67024_i0reverse_frame_2 - 0.023 15.1 10.4 0.025 15.0 10.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) DUF4736 PF15883.5 NODE_74965_length_210_cov_16.845714_g67024_i0reverse_frame_2 - 0.12 12.1 0.1 0.12 12.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) HATPase_c_5 PF14501.6 NODE_74961_length_210_cov_24.360000_g67020_i0reverse_frame_2 - 0.042 13.8 0.7 0.058 13.3 0.7 1.2 1 0 0 1 1 1 0 GHKL domain SH3_19 PF18597.1 NODE_74957_length_210_cov_29.622857_g67016_i0reverse_frame_3 - 0.09 12.6 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Myosin X N-terminal SH3 domain CTP_transf_like PF01467.26 NODE_74956_length_210_cov_31.680000_g67015_i0reverse_frame_2 - 0.14 12.4 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Cytidylyltransferase-like DUF2157 PF09925.9 NODE_74955_length_210_cov_32.268571_g67014_i0forward_frame_3 - 0.0064 16.3 0.1 0.0076 16.0 0.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2157) bZIP_1 PF00170.21 NODE_74954_length_210_cov_34.565714_g67013_i0reverse_frame_2 - 0.0067 16.5 2.5 0.0067 16.5 2.5 1.6 2 0 0 2 2 2 1 bZIP transcription factor DUF2774 PF11242.8 NODE_74954_length_210_cov_34.565714_g67013_i0reverse_frame_2 - 0.021 15.0 0.2 0.03 14.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) DUF1465 PF07323.12 NODE_74954_length_210_cov_34.565714_g67013_i0reverse_frame_2 - 0.076 12.9 0.0 0.084 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) TMEM234 PF10639.9 NODE_74954_length_210_cov_34.565714_g67013_i0forward_frame_3 - 0.08 13.0 1.9 0.078 13.0 1.9 1.1 1 0 0 1 1 1 0 Putative transmembrane family 234 DUF1325 PF07039.11 NODE_74953_length_210_cov_36.337143_g67012_i0forward_frame_2 - 0.15 12.1 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 SGF29 tudor-like domain BH4 PF02180.17 NODE_74950_length_210_cov_40.251429_g67009_i0reverse_frame_3 - 0.17 11.7 0.4 11 5.9 0.0 2.4 3 0 0 3 3 3 0 Bcl-2 homology region 4 DrsE_2 PF13686.6 NODE_74948_length_210_cov_42.942857_g67007_i0forward_frame_2 - 0.16 11.8 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 DsrE/DsrF/DrsH-like family zf-XS PF03470.14 NODE_74945_length_210_cov_44.554286_g67004_i0forward_frame_3 - 0.081 13.2 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 XS zinc finger domain Arabinose_Iso_C PF11762.8 NODE_74944_length_210_cov_44.662857_g67003_i0reverse_frame_2 - 0.086 12.7 0.0 0.09 12.6 0.0 1.1 1 0 0 1 1 1 0 L-arabinose isomerase C-terminal domain DUF1475 PF07343.11 NODE_74940_length_210_cov_50.811429_g66999_i0reverse_frame_3 - 0.1 12.4 1.2 0.11 12.2 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1475) Crust_neuro_H PF03858.13 NODE_74939_length_210_cov_51.045714_g66998_i0reverse_frame_3 - 0.069 14.0 0.0 0.13 13.1 0.0 1.6 1 1 0 1 1 1 0 Crustacean neurohormone H Ilar_coat PF01787.16 NODE_74938_length_210_cov_52.537143_g66997_i0forward_frame_3 - 0.058 13.2 0.0 0.06 13.1 0.0 1.0 1 0 0 1 1 1 0 Ilarvirus coat protein F-box-like PF12937.7 NODE_74937_length_210_cov_54.034286_g66996_i0forward_frame_2 - 0.016 15.0 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 F-box-like DUF726 PF05277.12 NODE_74936_length_210_cov_54.411429_g66995_i0forward_frame_3 - 0.00023 20.2 0.1 0.00024 20.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF726) Haemocyan_bet_s PF14830.6 NODE_74936_length_210_cov_54.411429_g66995_i0forward_frame_3 - 0.13 12.3 0.3 0.32 11.0 0.3 1.6 1 1 0 1 1 1 0 Haemocyanin beta-sandwich Yeast_MT PF11403.8 NODE_74935_length_210_cov_54.674286_g66994_i0reverse_frame_3 - 0.017 15.7 1.9 0.017 15.7 1.9 1.6 2 0 0 2 2 2 0 Yeast metallothionein BCD PF15461.6 NODE_74935_length_210_cov_54.674286_g66994_i0forward_frame_3 - 0.047 13.2 0.2 0.047 13.2 0.2 1.1 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase UNC45-central PF11701.8 NODE_74935_length_210_cov_54.674286_g66994_i0forward_frame_3 - 0.22 11.5 0.1 0.22 11.5 0.1 1.1 1 0 0 1 1 1 0 Myosin-binding striated muscle assembly central DWNN PF08783.11 NODE_74929_length_210_cov_61.080000_g66988_i0reverse_frame_3 - 0.044 14.1 0.3 0.044 14.1 0.3 1.7 2 0 0 2 2 2 0 DWNN domain DMA PF03474.14 NODE_74928_length_210_cov_61.388571_g66987_i0reverse_frame_3 - 0.083 12.5 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 DMRTA motif T2SSI PF02501.17 NODE_74928_length_210_cov_61.388571_g66987_i0reverse_frame_3 - 0.13 12.5 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein I PEGSRP PF07623.11 NODE_74928_length_210_cov_61.388571_g66987_i0forward_frame_3 - 0.19 11.5 0.2 0.19 11.5 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) SEP PF08059.13 NODE_74926_length_210_cov_68.520000_g66985_i0forward_frame_2 - 0.21 12.2 0.0 0.27 11.9 0.0 1.1 1 0 0 1 1 1 0 SEP domain Anti-TRAP PF15777.5 NODE_74925_length_210_cov_68.874286_g66984_i0forward_frame_3 - 2.4 8.2 9.0 8.4 6.4 9.0 1.8 1 1 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein HILPDA PF15220.6 NODE_74923_length_210_cov_70.782857_g66982_i0forward_frame_2 - 0.22 11.7 0.7 7 6.9 0.1 2.1 1 1 1 2 2 2 0 Hypoxia-inducible lipid droplet-associated TFIIS_C PF01096.18 NODE_74922_length_210_cov_73.388571_g66981_i0forward_frame_3 - 0.0066 16.3 0.1 0.012 15.5 0.1 1.4 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) zf_UBZ PF18439.1 NODE_74922_length_210_cov_73.388571_g66981_i0forward_frame_3 - 0.59 9.8 2.5 16 5.2 0.2 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger AWS PF17907.1 NODE_74921_length_210_cov_77.062857_g66980_i0reverse_frame_2 - 1.1e-10 41.3 11.4 1.1e-10 41.3 11.4 1.7 2 0 0 2 2 2 1 AWS domain DUF4787 PF16029.5 NODE_74921_length_210_cov_77.062857_g66980_i0reverse_frame_2 - 0.23 11.6 13.0 0.45 10.6 12.9 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4787) zf-RING_10 PF16685.5 NODE_74919_length_210_cov_79.297143_g66978_i0forward_frame_3 - 0.098 12.8 1.7 1.5 9.0 0.1 2.0 1 1 1 2 2 2 0 zinc RING finger of MSL2 DUF4132 PF13569.6 NODE_74919_length_210_cov_79.297143_g66978_i0forward_frame_2 - 0.042 13.6 0.1 0.059 13.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4132) Pox_A14 PF05767.12 NODE_74917_length_210_cov_79.908571_g66976_i0forward_frame_3 - 0.012 15.8 1.0 0.042 14.0 0.9 1.8 1 1 0 1 1 1 0 Poxvirus virion envelope protein A14 Pox_RNA_Pol_19 PF05320.12 NODE_74913_length_210_cov_94.154286_g66972_i0reverse_frame_3 - 2.3 8.2 10.3 2.5 8.0 10.3 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase 19 kDa subunit DUF678 PF05077.12 NODE_74911_length_210_cov_98.240000_g66970_i0forward_frame_3 - 4.6 7.4 7.6 4.9 7.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF678) DUF390 PF04094.14 NODE_74910_length_210_cov_98.600000_g66969_i0forward_frame_3 - 0.007 14.7 0.1 0.008 14.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF390) ArenaCapSnatch PF17296.2 NODE_74910_length_210_cov_98.600000_g66969_i0forward_frame_3 - 0.014 14.8 0.1 0.016 14.7 0.1 1.0 1 0 0 1 1 1 0 Arenavirus cap snatching domain RELT PF12606.8 NODE_74909_length_210_cov_100.474286_g66968_i0forward_frame_2 - 6.9 5.8 6.7 1.7 7.7 2.7 2.1 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 DUF3341 PF11821.8 NODE_74908_length_210_cov_100.474286_g66967_i0forward_frame_3 - 0.083 12.5 0.6 0.09 12.4 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) DUF971 PF06155.12 NODE_74907_length_210_cov_103.148571_g66966_i0forward_frame_3 - 7.5 7.3 8.2 11 6.7 8.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF971) FTH PF01827.27 NODE_74906_length_210_cov_104.588571_g66965_i0forward_frame_3 - 0.024 14.4 0.1 0.031 14.1 0.1 1.1 1 0 0 1 1 1 0 FTH domain DUF1878 PF08963.10 NODE_74905_length_210_cov_106.388571_g66964_i0forward_frame_2 - 0.11 13.0 0.0 0.13 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1878) Mito_fiss_reg PF05308.11 NODE_74899_length_210_cov_123.931429_g66958_i0forward_frame_3 - 4.8 7.2 7.8 4.4 7.3 7.8 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator Pacifastin_I PF05375.13 NODE_74897_length_210_cov_175.765714_g66956_i0forward_frame_3 - 0.84 9.4 14.2 0.11 12.2 10.5 1.5 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) Tcp10_C PF07202.13 NODE_74894_length_210_cov_268.725714_g66953_i0reverse_frame_2 - 0.0011 19.0 0.1 0.0014 18.6 0.1 1.4 1 1 0 1 1 1 1 T-complex protein 10 C-terminus BssC_TutF PF08201.11 NODE_74893_length_210_cov_296.925714_g66952_i0forward_frame_3 - 0.049 13.6 0.1 0.06 13.4 0.1 1.2 1 0 0 1 1 1 0 BssC/TutF protein DUF4529 PF15032.6 NODE_74891_length_210_cov_493.125714_g66950_i0reverse_frame_2 - 0.00026 20.3 0.1 0.00026 20.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4529) Phage_fiber_2 PF03406.13 NODE_74891_length_210_cov_493.125714_g66950_i0forward_frame_2 - 0.11 12.0 0.1 0.21 11.1 0.1 1.5 1 0 0 1 1 1 0 Phage tail fibre repeat G-patch_2 PF12656.7 NODE_74890_length_210_cov_1114.005714_g66949_i0reverse_frame_2 - 0.079 13.1 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 G-patch domain DUF3012 PF11216.8 NODE_74889_length_210_cov_9183.040000_g66948_i0reverse_frame_2 - 0.057 13.5 0.1 0.08 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3012) ubiquitin PF00240.23 NODE_74888_length_210_cov_49590.788571_g66947_i0reverse_frame_2 - 2.7e-16 59.1 0.6 3.6e-16 58.7 0.6 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_74888_length_210_cov_49590.788571_g66947_i0reverse_frame_2 - 1.9e-06 27.6 0.2 2.3e-06 27.3 0.2 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_74888_length_210_cov_49590.788571_g66947_i0reverse_frame_2 - 0.0013 19.1 0.2 0.0015 19.0 0.2 1.2 1 0 0 1 1 1 1 Ubiquitin-like domain EndIII_4Fe-2S PF10576.9 ORF99947 - 0.052 13.9 0.3 0.052 13.9 0.3 2.0 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III FCSD-flav_bind PF09242.11 ORF99774 - 0.31 11.4 0.6 0.34 11.3 0.0 1.3 2 0 0 2 2 2 0 Flavocytochrome c sulphide dehydrogenase, flavin-binding DUF3762 PF12591.8 ORF99655 - 0.024 14.9 1.4 0.029 14.6 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3762) RB_A PF01858.17 ORF99228 - 0.04 13.7 0.5 0.042 13.7 0.5 1.0 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain UPAR_LY6 PF00021.21 ORF99137 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF99137 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain Tfb2_C PF18307.1 ORF98961 - 0.089 13.2 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Transcription factor Tfb2 (p52) C-terminal domain DUF4832 PF16116.5 ORF98160 - 0.025 14.4 0.1 0.025 14.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4832) C_tripleX PF02363.19 ORF97519 - 1.9 8.9 14.8 0.59 10.5 1.8 2.8 3 0 0 3 3 3 0 Cysteine rich repeat MFS_4 PF06779.14 ORF97131 - 0.14 11.4 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB DUF1465 PF07323.12 ORF96984 - 0.024 14.5 0.0 0.026 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) RuvX PF03652.15 ORF96785 - 0.22 11.9 5.6 0.26 11.7 5.6 1.0 1 0 0 1 1 1 0 Holliday junction resolvase Ac76 PF05814.11 ORF96638 - 0.18 11.8 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) ODC_AZ PF02100.17 ORF96510 - 0.077 13.0 0.0 0.084 12.9 0.0 1.0 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme PqqA PF08042.11 ORF96388 - 0.09 12.8 0.1 0.09 12.8 0.1 2.5 3 0 0 3 3 3 0 PqqA family LRRNT PF01462.18 ORF9589 - 0.0091 15.6 1.9 0.017 14.8 1.9 1.4 1 0 0 1 1 1 1 Leucine rich repeat N-terminal domain PLDc PF00614.22 ORF95346 - 7.3e-07 29.1 0.0 1.9e-06 27.8 0.0 1.7 2 0 0 2 2 2 1 Phospholipase D Active site motif PLDc_2 PF13091.6 ORF95346 - 0.00055 19.8 0.0 0.00063 19.6 0.0 1.1 1 0 0 1 1 1 1 PLD-like domain UPAR_LY6 PF00021.21 ORF95012 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF95012 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain RPAP1_N PF08621.10 ORF94328 - 0.18 11.6 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 RPAP1-like, N-terminal UPF0093 PF03653.13 ORF94193 - 0.16 12.2 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) DUF3791 PF12668.7 ORF9418 - 0.047 13.7 0.0 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3791) Antimicrobial23 PF16048.5 ORF9418 - 0.17 11.6 0.1 0.17 11.6 0.1 1.8 2 0 0 2 2 2 0 Frog antimicrobial peptide PEP-CTERM PF07589.11 ORF93550 - 0.41 10.8 2.1 0.43 10.7 0.7 1.7 2 0 0 2 2 2 0 PEP-CTERM motif Comm PF15957.5 ORF93131 - 1.6 9.1 6.4 2 8.8 6.3 1.3 1 1 0 1 1 1 0 Commissureless MFS_2 PF13347.6 ORF92351 - 0.014 14.0 0.6 0.015 13.9 0.6 1.0 1 0 0 1 1 1 0 MFS/sugar transport protein Peptidase_C48 PF02902.19 ORF92351 - 0.063 13.1 0.3 0.063 13.1 0.3 1.2 1 0 0 1 1 1 0 Ulp1 protease family, C-terminal catalytic domain Baculo_LEF-2 PF03041.14 ORF92351 - 0.089 12.4 0.0 0.09 12.4 0.0 1.0 1 0 0 1 1 1 0 lef-2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks394.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks394.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks394.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks394.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DNA_pol3_theta PF06440.11 ORF92000 - 0.049 13.3 0.2 0.069 12.8 0.2 1.2 1 0 0 1 1 1 0 DNA polymerase III, theta subunit Fucose_iso_N1 PF07881.12 ORF8995 - 0.14 12.0 0.1 0.15 11.9 0.1 1.0 1 0 0 1 1 1 0 L-fucose isomerase, first N-terminal domain RhoGEF67_u1 PF16615.5 ORF89424 - 0.039 14.5 1.1 0.039 14.5 1.1 2.3 1 1 1 2 2 2 0 Unstructured region one on RhoGEF 6 and 7 PrgI PF12666.7 ORF8940 - 0.081 13.6 4.8 0.094 13.4 4.8 1.1 1 0 0 1 1 1 0 PrgI family protein DUF92 PF01940.16 ORF8940 - 0.23 10.8 1.1 0.23 10.9 1.1 1.1 1 0 0 1 1 1 0 Integral membrane protein DUF92 GntP_permease PF02447.16 ORF89113 - 0.15 10.8 0.2 0.15 10.8 0.2 1.2 1 0 0 1 1 1 0 GntP family permease C_Hendra PF16821.5 ORF88650 - 0.31 10.9 3.5 0.35 10.7 3.5 1.1 1 0 0 1 1 1 0 C protein from hendra and measles viruses DUF2099 PF09872.9 ORF86957 - 0.067 12.4 0.1 0.07 12.3 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2099) DUF2563 PF10817.8 ORF86760 - 0.11 13.1 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2563) Troponin PF00992.20 ORF86234 - 0.00063 20.0 6.0 0.26 11.6 0.2 2.1 1 1 1 2 2 2 2 Troponin Csm1_N PF18504.1 ORF86234 - 0.0019 18.5 9.5 0.041 14.2 4.0 2.1 1 1 1 2 2 2 2 Csm1 N-terminal domain HCMV_UL139 PF12507.8 ORF86234 - 0.0071 16.7 1.5 0.0083 16.5 1.5 1.1 1 0 0 1 1 1 1 Human Cytomegalovirus UL139 protein DUF2680 PF10925.8 ORF86234 - 0.0076 16.2 9.1 0.076 13.0 0.7 2.7 3 0 0 3 3 2 2 Protein of unknown function (DUF2680) IFT57 PF10498.9 ORF86234 - 0.01 14.9 8.8 0.011 14.8 8.8 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 PKcGMP_CC PF16808.5 ORF86234 - 0.011 15.6 9.5 0.43 10.5 2.0 2.8 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase SlyX PF04102.12 ORF86234 - 0.013 16.1 13.1 0.17 12.5 7.6 2.1 1 1 1 2 2 2 0 SlyX HR1 PF02185.16 ORF86234 - 0.02 15.0 3.0 0.02 15.0 3.0 2.2 1 1 1 2 2 2 0 Hr1 repeat FAM76 PF16046.5 ORF86234 - 0.046 13.1 9.6 0.048 13.0 9.6 1.0 1 0 0 1 1 1 0 FAM76 protein Tup_N PF08581.10 ORF86234 - 0.056 13.7 10.2 0.75 10.1 10.0 2.0 1 1 0 1 1 1 0 Tup N-terminal ABC_tran_CTD PF16326.5 ORF86234 - 0.063 13.5 8.9 0.083 13.2 8.9 1.2 1 0 0 1 1 1 0 ABC transporter C-terminal domain DivIC PF04977.15 ORF86234 - 0.079 12.7 14.4 23 4.9 14.4 2.1 1 1 0 1 1 1 0 Septum formation initiator THOC7 PF05615.13 ORF86234 - 0.095 13.0 9.1 0.11 12.8 9.1 1.1 1 0 0 1 1 1 0 Tho complex subunit 7 TSC22 PF01166.18 ORF86234 - 0.098 13.0 1.8 4.8 7.6 0.3 2.5 1 1 1 2 2 2 0 TSC-22/dip/bun family Pox_A_type_inc PF04508.12 ORF86234 - 0.1 12.5 4.8 2.4 8.1 0.3 2.8 2 1 1 3 3 3 0 Viral A-type inclusion protein repeat DUF16 PF01519.16 ORF86234 - 0.14 12.7 9.6 0.24 11.9 9.6 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF16 GrpE PF01025.19 ORF86234 - 0.15 11.7 7.3 0.2 11.3 7.3 1.3 1 0 0 1 1 1 0 GrpE kleA_kleC PF17383.2 ORF86234 - 0.17 12.3 2.8 0.52 10.7 2.2 1.8 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A DUF919 PF06034.11 ORF86234 - 0.17 11.7 5.6 1 9.2 0.2 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) Med9 PF07544.13 ORF86234 - 0.18 11.9 10.4 1.3 9.1 2.1 2.2 1 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF3450 PF11932.8 ORF86234 - 0.19 11.0 13.3 2.3 7.4 13.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) DUF4972 PF16342.5 ORF86234 - 0.21 11.3 3.2 0.23 11.1 3.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) CENP-K PF11802.8 ORF86234 - 0.22 11.0 8.8 0.24 10.9 8.8 1.0 1 0 0 1 1 1 0 Centromere-associated protein K ubiquitin PF00240.23 ORF86234 - 0.25 11.1 5.5 0.66 9.8 2.9 2.5 1 1 1 2 2 2 0 Ubiquitin family DUF3160 PF11369.8 ORF86234 - 0.3 9.5 4.5 0.31 9.4 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3160) MPS2 PF17060.5 ORF86234 - 0.33 10.2 6.4 0.73 9.0 2.1 1.8 1 1 1 2 2 2 0 Monopolar spindle protein 2 V_ATPase_I PF01496.19 ORF86234 - 0.35 8.7 4.4 0.38 8.6 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF724 PF05266.14 ORF86234 - 0.39 10.5 6.7 0.44 10.4 6.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF4200 PF13863.6 ORF86234 - 0.52 10.7 12.4 0.48 10.8 6.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) AAA_13 PF13166.6 ORF86234 - 0.55 8.8 6.8 0.5 8.9 6.8 1.0 1 0 0 1 1 1 0 AAA domain DWNN PF08783.11 ORF86234 - 0.58 10.5 3.4 2.8 8.3 3.3 1.9 1 1 0 1 1 1 0 DWNN domain HlyD_2 PF12700.7 ORF86234 - 0.67 8.6 7.1 0.75 8.5 7.1 1.0 1 0 0 1 1 1 0 HlyD family secretion protein FlaC_arch PF05377.11 ORF86234 - 0.97 9.9 4.7 73 3.9 4.7 2.2 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) USP8_interact PF08941.10 ORF86234 - 1.1 9.0 6.4 4.6 7.0 6.4 1.8 1 1 0 1 1 1 0 USP8 interacting ATP-synt_E PF05680.12 ORF86234 - 1.3 9.5 6.5 1.4 9.3 6.5 1.1 1 0 0 1 1 1 0 ATP synthase E chain DUF4407 PF14362.6 ORF86234 - 1.3 8.3 6.8 1.5 8.1 6.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4559 PF15112.6 ORF86234 - 2.8 7.5 8.4 3.1 7.4 8.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) TMPIT PF07851.13 ORF86234 - 3.5 6.8 6.4 3.9 6.6 6.4 1.0 1 0 0 1 1 1 0 TMPIT-like protein LapA_dom PF06305.11 ORF86234 - 3.7 7.4 10.4 3.8 7.4 2.9 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain DUF4140 PF13600.6 ORF86234 - 3.7 8.0 9.0 4.4 7.8 5.2 2.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) BST2 PF16716.5 ORF86234 - 4.1 8.1 14.1 6.9 7.3 2.7 2.2 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Spc24 PF08286.11 ORF86234 - 4.6 7.5 9.0 15 5.9 8.9 1.7 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 DUF2968 PF11180.8 ORF86234 - 7.1 6.2 15.7 7.9 6.1 15.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Atg14 PF10186.9 ORF86234 - 7.4 5.6 9.8 10 5.1 9.8 1.3 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 zf-C2HE PF16278.5 ORF86050 - 0.0035 17.7 2.2 0.0051 17.2 2.2 1.3 1 0 0 1 1 1 1 C2HE / C2H2 / C2HC zinc-binding finger Ribosomal_L20 PF00453.18 ORF86050 - 0.041 14.0 4.5 0.048 13.8 4.5 1.0 1 0 0 1 1 1 0 Ribosomal protein L20 VacA2 PF03077.14 ORF85733 - 0.022 14.6 0.1 0.026 14.4 0.1 1.2 1 0 0 1 1 1 0 Putative vacuolating cytotoxin Ribosomal_S17e PF00833.18 ORF85653 - 7.2e-16 58.2 0.3 8.2e-16 58.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal S17 Toxin_2 PF00451.19 ORF85448 - 0.24 11.7 5.3 15 6.0 0.3 3.2 2 1 1 3 3 3 0 Scorpion short toxin, BmKK2 zf-UBP_var PF17807.1 ORF85334 - 0.22 11.3 0.7 0.37 10.6 0.1 1.7 2 1 0 2 2 2 0 Variant UBP zinc finger MtN3_slv PF03083.16 ORF85236 - 0.03 14.3 1.4 0.036 14.1 1.4 1.1 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange Receptor_IA-2 PF11548.8 ORF85070 - 0.0058 16.6 0.1 0.0064 16.4 0.1 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase receptor IA-2 Ribosomal_S17e PF00833.18 ORF8461 - 7.2e-16 58.2 0.3 8.2e-16 58.0 0.3 1.0 1 0 0 1 1 1 1 Ribosomal S17 DUF2634 PF10934.8 ORF84155 - 0.018 15.1 2.7 0.02 15.0 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2634) MSL2-CXC PF16682.5 ORF83289 - 4.3 7.5 14.7 0.53 10.4 10.4 1.7 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 DUF3139 PF11337.8 ORF83119 - 6.5 7.5 7.4 0.64 10.7 3.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) Gp_dh_C PF02800.20 ORF83 - 3.6e-10 39.7 0.1 4.4e-10 39.4 0.1 1.1 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LBP_BPI_CETP_C PF02886.17 ORF82987 - 0.13 11.7 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 LBP / BPI / CETP family, C-terminal domain T_cell_tran_alt PF15128.6 ORF82955 - 0.05 13.4 0.1 0.055 13.3 0.1 1.2 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF5090 PF17009.5 ORF82955 - 4.3 7.3 9.1 4.8 7.1 9.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF4958 PF16319.5 ORF8285 - 0.2 9.6 0.0 0.21 9.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4958) SMAP PF15477.6 ORF82794 - 0.13 13.3 0.0 0.15 13.0 0.0 1.2 1 0 0 1 1 1 0 Small acidic protein family ATP-synt_8 PF00895.20 ORF81972 - 0.014 15.9 4.6 0.019 15.4 4.6 1.3 1 0 0 1 1 1 0 ATP synthase protein 8 DUF3533 PF12051.8 ORF81325 - 0.024 13.6 0.6 0.026 13.5 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) EF-hand_1 PF00036.32 ORF81220 - 4.2e-17 60.3 0.7 1.4e-07 30.6 0.1 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF81220 - 1.4e-16 60.7 0.1 1.5e-16 60.6 0.1 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF81220 - 7.9e-14 50.3 0.1 1.3e-06 27.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF81220 - 3.7e-13 49.1 1.1 2.4e-06 27.3 0.3 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF81220 - 4.2e-13 48.1 0.8 1.1e-05 24.7 0.1 2.3 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF81220 - 0.00018 21.8 0.1 0.00021 21.6 0.1 1.0 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF81220 - 0.0003 21.0 0.0 0.00037 20.8 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF81220 - 0.0029 17.5 0.1 0.0031 17.4 0.1 1.1 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Lip_prot_lig_C PF10437.9 ORF81220 - 0.027 14.4 0.3 0.14 12.1 0.2 1.8 1 1 1 2 2 2 0 Bacterial lipoate protein ligase C-terminus PMBR PF09373.10 ORF81220 - 0.065 13.4 0.0 20 5.5 0.0 2.7 3 0 0 3 3 3 0 Pseudomurein-binding repeat Trehalase_Ca-bi PF07492.11 ORF81220 - 0.093 12.5 0.5 0.18 11.5 0.5 1.5 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain UPF0154 PF03672.13 ORF81220 - 0.21 11.6 0.0 0.28 11.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) D123 PF07065.14 ORF80940 - 0.06 12.5 0.1 0.065 12.4 0.1 1.0 1 0 0 1 1 1 0 D123 DUF3917 PF13055.6 ORF80424 - 0.13 12.7 0.1 0.19 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3917) MtN3_slv PF03083.16 ORF80267 - 0.03 14.3 1.4 0.036 14.1 1.4 1.1 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange Hormone_5 PF00184.17 ORF80097 - 0.059 14.2 1.2 0.065 14.1 1.2 1.1 1 0 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain DUF2575 PF10837.8 ORF80039 - 0.1 12.9 0.7 0.14 12.5 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2575) DUF5534 PF17686.1 ORF79954 - 0.084 13.1 0.0 0.1 12.9 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5534) DUF2576 PF10845.8 ORF79545 - 0.07 12.7 2.7 0.1 12.2 2.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) PBC PF03792.13 ORF792 - 0.013 15.3 1.2 0.014 15.1 1.2 1.1 1 0 0 1 1 1 0 PBC domain Peptidase_S49 PF01343.18 ORF792 - 0.048 13.6 0.6 0.052 13.5 0.6 1.1 1 0 0 1 1 1 0 Peptidase family S49 YlbE PF14003.6 ORF792 - 0.098 13.1 3.9 0.57 10.7 0.9 2.2 1 1 1 2 2 2 0 YlbE-like protein ADAM17_MPD PF16698.5 ORF79082 - 0.0013 19.0 9.7 0.0018 18.6 9.7 1.1 1 0 0 1 1 1 1 Membrane-proximal domain, switch, for ADAM17 RE_TdeIII PF09520.10 ORF78883 - 0.084 12.5 0.0 0.093 12.4 0.0 1.0 1 0 0 1 1 1 0 Type II restriction endonuclease, TdeIII DBD_Tnp_Mut PF03108.15 ORF78383 - 0.67 10.0 5.0 1.2 9.2 3.3 2.0 1 1 0 1 1 1 0 MuDR family transposase Tmemb_9 PF05434.11 ORF78178 - 0.18 11.7 4.5 0.21 11.5 4.5 1.0 1 0 0 1 1 1 0 TMEM9 HTH_9 PF08221.11 ORF78022 - 0.0017 18.4 0.8 0.0023 18.0 0.2 1.5 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain LINES_N PF14694.6 ORF77903 - 0.0017 17.9 1.1 0.0017 17.9 1.1 1.0 1 0 0 1 1 1 1 Lines N-terminus DUF5439 PF17507.2 ORF77903 - 0.01 16.0 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5439) Beta-TrCP_D PF12125.8 ORF7755 - 0.072 13.0 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 D domain of beta-TrCP TMEM72 PF16054.5 ORF77231 - 0.74 9.5 5.4 0.9 9.2 5.4 1.0 1 0 0 1 1 1 0 Transmembrane protein family 72 NOC3p PF07540.11 ORF76760 - 0.11 13.0 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Nucleolar complex-associated protein CCT PF06203.14 ORF76524 - 0.17 11.9 0.1 0.23 11.5 0.1 1.2 1 0 0 1 1 1 0 CCT motif TgMIC1 PF11476.8 ORF76486 - 0.12 12.1 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 Eclosion PF04736.12 ORF75590 - 0.0056 16.4 0.0 0.0078 15.9 0.0 1.2 1 0 0 1 1 1 1 Eclosion hormone zf_ZIC PF18366.1 ORF75569 - 0.033 14.3 0.4 0.051 13.7 0.4 1.4 1 0 0 1 1 1 0 Zic proteins zinc finger domain Tat PF00539.18 ORF75569 - 0.16 12.1 7.8 0.064 13.4 6.0 1.4 1 1 0 1 1 1 0 Transactivating regulatory protein (Tat) 7TM_GPCR_Srbc PF10316.9 ORF75569 - 1.6 8.2 8.9 1.7 8.0 8.9 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srbc YlaC PF10777.9 ORF75446 - 0.15 11.9 1.9 0.18 11.6 1.9 1.1 1 0 0 1 1 1 0 Inner membrane protein YlaC DUF4525 PF15027.6 ORF75446 - 0.23 11.2 1.0 0.23 11.2 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) Beta-TrCP_D PF12125.8 ORF74757 - 0.072 13.0 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 D domain of beta-TrCP Toxin_14 PF07829.11 ORF74575 - 0.83 9.7 4.1 20 5.3 0.0 3.0 3 0 0 3 3 3 0 Alpha-A conotoxin PIVA-like protein E7 PF00527.18 ORF74473 - 0.096 12.9 2.5 0.12 12.6 2.5 1.1 1 0 0 1 1 1 0 E7 protein, Early protein TraP PF07296.11 ORF73634 - 0.068 12.3 0.2 0.076 12.2 0.2 1.0 1 0 0 1 1 1 0 TraP protein FemAB PF02388.16 ORF73309 - 0.57 9.0 3.2 0.62 8.9 3.2 1.0 1 0 0 1 1 1 0 FemAB family SH2_2 PF14633.6 ORF73265 - 0.074 12.4 0.0 0.083 12.3 0.0 1.0 1 0 0 1 1 1 0 SH2 domain Suv3_C_1 PF18147.1 ORF73259 - 0.051 13.4 0.3 0.11 12.4 0.1 1.7 2 0 0 2 2 2 0 Suv3 C-terminal domain 1 DUF35_N PF12172.8 ORF72363 - 0.19 11.6 0.3 0.31 11.0 0.0 1.5 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) PAG PF15347.6 ORF72363 - 0.23 10.4 0.1 0.24 10.3 0.1 1.1 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched LINES_N PF14694.6 ORF71986 - 0.0017 17.9 1.1 0.0017 17.9 1.1 1.0 1 0 0 1 1 1 1 Lines N-terminus DUF5439 PF17507.2 ORF71986 - 0.01 16.0 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5439) Beta-TrCP_D PF12125.8 ORF7177 - 0.072 13.0 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 D domain of beta-TrCP Beta-TrCP_D PF12125.8 ORF71418 - 0.072 13.0 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 D domain of beta-TrCP Autoind_bind PF03472.15 ORF71394 - 0.076 12.5 0.0 0.083 12.4 0.0 1.1 1 0 0 1 1 1 0 Autoinducer binding domain F-box-like PF12937.7 ORF71240 - 0.12 12.3 0.4 0.18 11.7 0.4 1.4 1 0 0 1 1 1 0 F-box-like Acyl_transf_1 PF00698.21 ORF70887 - 3.7e-05 23.4 0.0 3.9e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Acyl transferase domain BMF PF15185.6 ORF70616 - 0.37 10.5 1.8 0.39 10.4 1.8 1.1 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis DUF4131 PF13567.6 ORF70553 - 1.9 8.1 5.7 2.2 7.9 5.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2269 PF10027.9 ORF70553 - 6.6 6.8 9.3 9.5 6.3 0.3 2.1 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2269) DUF3397 PF11877.8 ORF70081 - 0.043 14.0 0.1 0.048 13.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3397) bZIP_C PF12498.8 ORF69590 - 0.067 14.2 0.8 0.067 14.2 0.8 1.0 1 0 0 1 1 1 0 Basic leucine-zipper C terminal TSP_1 PF00090.19 ORF68243 - 0.064 13.5 1.5 0.94 9.8 0.5 2.1 2 0 0 2 2 2 0 Thrombospondin type 1 domain UPAR_LY6 PF00021.21 ORF68220 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF68220 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain Siva PF05458.12 ORF67630 - 1.3 8.6 10.1 1.6 8.4 10.1 1.0 1 0 0 1 1 1 0 Cd27 binding protein (Siva) DUF3762 PF12591.8 ORF6726 - 0.024 14.9 1.4 0.029 14.6 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3762) Matrilin_ccoil PF10393.9 ORF67212 - 0.082 12.8 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin Smim3 PF17307.2 ORF67071 - 0.075 12.5 0.2 0.15 11.6 0.2 1.5 1 0 0 1 1 1 0 Small integral membrane protein 3 NAR PF16251.5 ORF6690 - 0.13 12.9 0.0 0.14 12.8 0.0 1.1 1 0 0 1 1 1 0 Nucleic acid-binding domain (NAR) POM121 PF15229.6 ORF6690 - 2.7 7.6 5.0 2.6 7.7 5.0 1.1 1 0 0 1 1 1 0 POM121 family DUF4225 PF13988.6 ORF65426 - 0.057 13.0 0.3 0.066 12.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4225) FliT PF05400.13 ORF65243 - 0.0029 18.4 2.7 0.0031 18.3 2.7 1.0 1 0 0 1 1 1 1 Flagellar protein FliT HOK_GEF PF01848.16 ORF6514 - 2.4e-21 74.8 5.7 2.9e-21 74.6 5.7 1.1 1 0 0 1 1 1 1 Hok/gef family DUF4231 PF14015.6 ORF6514 - 0.091 13.2 0.1 0.1 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) DUF3796 PF12676.7 ORF64456 - 0.031 14.7 2.0 0.032 14.7 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) DUF4051 PF13260.6 ORF64456 - 0.75 9.6 3.3 1.4 8.7 3.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) DUF4014 PF13198.6 ORF64456 - 2.3 8.7 6.7 2.9 8.3 6.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4014) DUF2933 PF11666.8 ORF64456 - 7.2 6.7 9.7 4.9 7.3 3.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2933) PMAIP1 PF15150.6 ORF63501 - 6.7 6.7 6.6 7.5 6.5 1.0 2.3 1 1 1 2 2 2 0 Phorbol-12-myristate-13-acetate-induced ig PF00047.25 ORF62444 - 0.069 13.3 0.0 0.09 13.0 0.0 1.2 1 0 0 1 1 1 0 Immunoglobulin domain PRRSV_2b PF07069.11 ORF62378 - 0.052 14.1 1.8 0.06 13.9 1.8 1.1 1 0 0 1 1 1 0 Porcine reproductive and respiratory syndrome virus 2b DUF412 PF04217.13 ORF61983 - 0.022 14.7 0.4 0.023 14.6 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF412 Moricin PF06451.11 ORF61752 - 0.051 13.4 0.0 0.074 12.8 0.0 1.2 1 0 0 1 1 1 0 Moricin Yae1_N PF09811.9 ORF61709 - 0.0021 17.7 11.1 0.064 13.0 1.3 2.8 2 1 1 3 3 3 2 Essential protein Yae1, N terminal GntR PF00392.21 ORF61108 - 0.14 11.8 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HA2 PF04408.23 ORF60488 - 0.066 13.5 0.0 0.082 13.2 0.0 1.1 1 0 0 1 1 1 0 Helicase associated domain (HA2) LpoB PF13036.6 ORF60086 - 7.6e-16 58.4 0.0 8.3e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 Peptidoglycan-synthase activator LpoB Elong_Iki1 PF10483.9 ORF6005 - 0.056 12.9 0.0 0.059 12.9 0.0 1.0 1 0 0 1 1 1 0 Elongator subunit Iki1 FAP PF07174.11 ORF5891 - 1.5 8.2 11.5 1.6 8.1 11.5 1.1 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) EndIII_4Fe-2S PF10576.9 ORF58832 - 0.052 13.9 0.3 0.052 13.9 0.3 2.0 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III DUF569 PF04601.13 ORF5867 - 0.063 13.0 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF569) Tht1 PF04163.12 ORF58646 - 0.22 10.2 1.5 0.22 10.2 1.5 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein TP53IP5 PF15331.6 ORF57890 - 0.17 12.0 2.7 0.21 11.7 2.7 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 Cornichon PF03311.14 ORF57885 - 0.0072 16.7 0.2 0.0081 16.5 0.2 1.1 1 0 0 1 1 1 1 Cornichon protein Metal_CEHH PF14455.6 ORF57751 - 0.038 13.6 0.1 0.038 13.6 0.1 1.0 1 0 0 1 1 1 0 Predicted metal binding domain Glyco_hydro_42M PF08532.10 ORF57333 - 0.25 10.8 0.0 0.28 10.6 0.0 1.0 1 0 0 1 1 1 0 Beta-galactosidase trimerisation domain DUF2757 PF10955.8 ORF57256 - 0.0038 17.4 0.6 0.0065 16.7 0.4 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2757) Crust_neurohorm PF01147.17 ORF57256 - 0.024 14.5 1.6 0.035 13.9 1.6 1.3 1 1 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family TMPIT PF07851.13 ORF57115 - 4.4 6.4 6.9 5 6.3 6.9 1.0 1 0 0 1 1 1 0 TMPIT-like protein HgmA PF04209.13 ORF56529 - 0.26 9.9 2.2 0.27 9.9 2.2 1.0 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase MAP17 PF15807.5 ORF56529 - 7.2 6.9 9.8 8.5 6.6 9.8 1.1 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 PHD_Oberon PF07227.11 ORF5633 - 0.007 16.2 0.2 0.0079 16.1 0.2 1.0 1 0 0 1 1 1 1 PHD - plant homeodomain finger protein U62_UL91 PF17442.2 ORF5633 - 0.089 12.8 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins TgMIC1 PF11476.8 ORF55872 - 0.16 11.8 0.3 0.18 11.6 0.3 1.1 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 G_glu_transpept PF01019.21 ORF55836 - 0.11 11.2 0.0 0.13 11.0 0.0 1.0 1 0 0 1 1 1 0 Gamma-glutamyltranspeptidase DUF2417 PF10329.9 ORF55267 - 1 8.7 6.7 1.1 8.6 6.7 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) DUF4560 PF15118.6 ORF54995 - 0.19 11.6 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4560) DUF3931 PF13082.6 ORF54960 - 0.13 12.5 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3931) Cytochrom_CIII PF02085.16 ORF5493 - 0.0063 16.8 2.4 0.0067 16.7 2.4 1.1 1 0 0 1 1 1 1 Class III cytochrome C family RNA_pol_Rpc4 PF05132.14 ORF54544 - 0.048 14.1 0.7 0.048 14.1 0.7 1.7 1 1 1 2 2 2 0 RNA polymerase III RPC4 ERGIC_N PF13850.6 ORF53528 - 0.0041 17.4 0.3 0.0052 17.1 0.3 1.3 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) FemAB PF02388.16 ORF53528 - 0.14 11.1 0.1 0.15 10.9 0.1 1.0 1 0 0 1 1 1 0 FemAB family E6 PF00518.17 ORF53373 - 0.024 15.1 2.3 0.03 14.8 2.3 1.2 1 0 0 1 1 1 0 Early Protein (E6) SMAP PF15477.6 ORF53074 - 0.13 13.3 0.0 0.15 13.0 0.0 1.2 1 0 0 1 1 1 0 Small acidic protein family Beta-TrCP_D PF12125.8 ORF52706 - 0.072 13.0 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 D domain of beta-TrCP UPF0093 PF03653.13 ORF52198 - 0.16 12.2 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0093) DUF1644 PF07800.12 ORF51946 - 0.057 13.5 0.0 0.059 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) DUF5388 PF17363.2 ORF51865 - 4.5 7.5 8.5 7.7 6.8 0.7 2.9 1 1 2 3 3 3 0 Family of unknown function (DUF5388) DUF5553 PF17707.1 ORF51449 - 0.14 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5553) CsbD PF05532.12 ORF51434 - 7.6e-22 77.0 8.4 8.8e-22 76.8 8.4 1.1 1 0 0 1 1 1 1 CsbD-like IBP39 PF11422.8 ORF51434 - 0.11 12.2 0.0 0.13 12.1 0.0 1.0 1 0 0 1 1 1 0 Initiator binding protein 39 kDa DUF2142 PF09913.9 ORF51309 - 0.036 12.9 1.9 0.041 12.7 1.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) DUF2533 PF10752.9 ORF51142 - 0.032 14.7 0.0 0.038 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) SLBP_RNA_bind PF15247.6 ORF50415 - 0.027 14.6 0.5 0.035 14.2 0.5 1.2 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain Aldolase_II PF00596.21 ORF50344 - 6.7e-08 32.7 0.1 9.9e-08 32.1 0.1 1.3 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain DUF2556 PF10831.8 ORF50171 - 0.035 14.1 1.3 0.05 13.5 0.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2556) TPK_B1_binding PF04265.14 ORF48827 - 0.0051 16.5 0.0 0.0059 16.3 0.0 1.1 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, vitamin B1 binding domain Het-C PF07217.11 ORF48827 - 0.22 10.0 0.0 0.22 10.0 0.0 1.0 1 0 0 1 1 1 0 Heterokaryon incompatibility protein Het-C DUF2701 PF10857.8 ORF48792 - 0.019 15.0 0.7 0.027 14.5 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) Sh_2 PF17512.2 ORF48792 - 0.037 13.8 0.4 0.038 13.8 0.4 1.0 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein DUF5645 PF18713.1 ORF45759 - 0.042 14.1 0.2 0.047 14.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5645) Pertus-S4-tox PF09275.10 ORF44196 - 0.031 14.6 0.0 0.033 14.5 0.0 1.1 1 0 0 1 1 1 0 Pertussis toxin S4 subunit DUF5439 PF17507.2 ORF43921 - 0.044 14.0 1.6 0.054 13.7 1.6 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5439) UPF0179 PF03684.13 ORF42751 - 0.13 12.1 2.2 0.16 11.8 2.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0179) DUF547 PF04784.14 ORF42645 - 0.029 14.4 0.1 0.032 14.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF547 Med4 PF10018.9 ORF42594 - 0.084 12.5 0.0 0.087 12.5 0.0 1.0 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 R3H PF01424.22 ORF42594 - 0.12 12.4 0.1 0.18 11.8 0.1 1.2 1 0 0 1 1 1 0 R3H domain Inhibitor_I67 PF11405.8 ORF4256 - 0.0024 18.1 0.1 0.0024 18.1 0.1 2.0 2 0 0 2 2 2 1 Bromelain inhibitor VI Baculo_helicase PF04735.12 ORF4256 - 0.05 11.1 3.0 0.059 10.9 3.0 1.0 1 0 0 1 1 1 0 Baculovirus DNA helicase RNA_pol_Rpb6 PF01192.22 ORF42237 - 0.1 12.6 0.2 0.16 12.0 0.2 1.3 1 0 0 1 1 1 0 RNA polymerase Rpb6 Corona_S1 PF01600.16 ORF42216 - 0.27 10.0 2.0 0.29 9.9 2.0 1.0 1 0 0 1 1 1 0 Coronavirus S1 glycoprotein RB_A PF01858.17 ORF41617 - 0.04 13.7 0.5 0.042 13.7 0.5 1.0 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain Adeno_E3_CR2 PF02439.15 ORF40924 - 0.021 14.6 5.6 0.043 13.6 5.6 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Glycophorin_A PF01102.18 ORF40924 - 0.053 13.8 0.2 0.06 13.6 0.2 1.0 1 0 0 1 1 1 0 Glycophorin A TRM13 PF05206.14 ORF4034 - 0.1 12.1 1.5 0.11 12.0 1.5 1.1 1 0 0 1 1 1 0 Methyltransferase TRM13 Calici_PP_N PF08405.11 ORF4034 - 0.15 10.8 0.4 0.15 10.8 0.4 1.0 1 0 0 1 1 1 0 Viral polyprotein N-terminal DUF2105 PF09878.9 ORF39788 - 0.052 13.3 0.5 0.053 13.3 0.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2105) 2TM PF13239.6 ORF39747 - 0.077 13.3 0.6 0.094 13.0 0.6 1.2 1 1 0 1 1 1 0 2TM domain Ribosomal_L23 PF00276.20 ORF39747 - 0.15 12.5 0.1 0.18 12.2 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L23 DUF3704 PF12488.8 ORF3952 - 0.037 13.7 0.0 0.064 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3704) DUF1639 PF07797.14 ORF39368 - 0.78 9.8 0.0 0.78 9.8 0.0 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1639) SeqA_N PF17206.3 ORF3924 - 0.19 11.1 0.1 0.31 10.4 0.1 1.3 1 0 0 1 1 1 0 SeqA protein N-terminal domain DUF2798 PF11391.8 ORF39054 - 0.0077 16.2 0.2 0.01 15.9 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2798) TgMIC1 PF11476.8 ORF39054 - 0.085 12.6 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 Ntox11 PF15521.6 ORF37929 - 0.11 12.1 0.0 0.12 12.0 0.0 1.0 1 0 0 1 1 1 0 Novel toxin 11 FemAB PF02388.16 ORF37618 - 0.57 9.0 3.2 0.62 8.9 3.2 1.0 1 0 0 1 1 1 0 FemAB family FerA PF08165.11 ORF37092 - 0.023 14.7 0.0 1.1 9.3 0.0 2.2 1 1 1 2 2 2 0 FerA (NUC095) domain Response_reg PF00072.24 ORF37058 - 3.7e-09 36.7 0.0 3.9e-09 36.7 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Trp_halogenase PF04820.14 ORF36820 - 0.15 10.9 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Tryptophan halogenase LRRNT PF01462.18 ORF36566 - 2.3 8.0 8.4 2.8 7.7 0.0 2.8 3 0 0 3 3 3 0 Leucine rich repeat N-terminal domain DUF4527 PF15030.6 ORF36019 - 0.077 12.4 2.8 0.076 12.4 2.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) DUF3975 PF13126.6 ORF35248 - 0.16 12.4 6.1 0.2 12.1 6.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) ExoD PF06055.12 ORF35129 - 0.0059 16.0 0.1 0.0063 15.9 0.1 1.0 1 0 0 1 1 1 1 Exopolysaccharide synthesis, ExoD DegS PF05384.11 ORF35073 - 0.012 15.1 0.4 0.014 14.9 0.4 1.1 1 0 0 1 1 1 0 Sensor protein DegS PV_NSP1 PF12433.8 ORF34802 - 0.11 12.8 0.1 0.14 12.5 0.1 1.1 1 0 0 1 1 1 0 Parvovirus non-structural protein 1 CCG PF02754.16 ORF34044 - 0.074 13.3 0.1 0.084 13.1 0.1 1.1 1 0 0 1 1 1 0 Cysteine-rich domain APO_RNA-bind PF05634.11 ORF33515 - 0.12 11.7 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 APO RNA-binding VD10_N PF08476.10 ORF32397 - 0.032 13.9 0.1 0.053 13.2 0.1 1.4 1 0 0 1 1 1 0 Viral D10 N-terminal AnmK PF03702.14 ORF32397 - 0.075 12.1 0.0 0.076 12.1 0.0 1.0 1 0 0 1 1 1 0 Anhydro-N-acetylmuramic acid kinase U1snRNP70_N PF12220.8 ORF32022 - 0.00029 21.4 0.0 0.00035 21.2 0.0 1.2 1 0 0 1 1 1 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal NiFe_hyd_3_EhaA PF17367.2 ORF3195 - 0.074 13.2 0.0 0.076 13.2 0.0 1.1 1 0 0 1 1 1 0 NiFe-hydrogenase-type-3 Eha complex subunit A DUF5004 PF16395.5 ORF31768 - 0.0029 17.6 0.0 0.0034 17.4 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5004) VARLMGL PF14383.6 ORF2994 - 0.11 12.1 0.3 0.23 11.0 0.3 1.6 1 0 0 1 1 1 0 DUF761-associated sequence motif DUF3839 PF12943.7 ORF2951 - 0.045 13.2 0.0 0.045 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) FemAB PF02388.16 ORF29413 - 0.57 9.0 3.2 0.62 8.9 3.2 1.0 1 0 0 1 1 1 0 FemAB family C_Hendra PF16821.5 ORF29288 - 0.31 10.9 3.5 0.35 10.7 3.5 1.1 1 0 0 1 1 1 0 C protein from hendra and measles viruses TetR_C_29 PF17938.1 ORF29243 - 0.004 17.3 0.0 0.0047 17.0 0.0 1.0 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain KH_1 PF00013.29 ORF2915 - 6.9e-07 29.0 0.3 8.2e-07 28.8 0.3 1.1 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF2915 - 0.0012 18.6 0.5 0.0013 18.5 0.5 1.1 1 0 0 1 1 1 1 KH domain Humanin PF15040.6 ORF28972 - 0.8 9.2 6.0 1.3 8.6 6.0 1.3 1 0 0 1 1 1 0 Humanin family SARA PF11409.8 ORF2870 - 3.6 7.9 7.8 0.44 10.8 2.9 1.9 2 0 0 2 2 2 0 Smad anchor for receptor activation (SARA) Vif PF00559.17 ORF28486 - 6.8e-05 22.6 0.2 6.8e-05 22.6 0.2 1.1 1 0 0 1 1 1 1 Retroviral Vif (Viral infectivity) protein Transp_Tc5_C PF04236.15 ORF28032 - 0.095 13.1 4.0 0.19 12.1 3.4 1.7 1 1 1 2 2 2 0 Tc5 transposase C-terminal domain RecT PF03837.14 ORF27895 - 0.019 14.4 0.1 0.021 14.3 0.1 1.0 1 0 0 1 1 1 0 RecT family SbmA_BacA PF05992.12 ORF27893 - 0.0093 15.4 0.2 0.0098 15.4 0.2 1.0 1 0 0 1 1 1 1 SbmA/BacA-like family ANAPC1 PF12859.7 ORF27764 - 0.18 12.4 2.9 0.22 12.1 2.9 1.0 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 UPAR_LY6 PF00021.21 ORF2729 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF2729 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain CheW PF01584.19 ORF27005 - 0.024 14.2 0.0 0.027 14.1 0.0 1.1 1 0 0 1 1 1 0 CheW-like domain PsbX PF06596.11 ORF27005 - 1.1 9.3 3.9 0.68 10.0 0.5 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) DUF2701 PF10857.8 ORF2636 - 0.025 14.6 1.6 0.036 14.1 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) Sh_2 PF17512.2 ORF2636 - 0.05 13.4 0.8 0.051 13.4 0.8 1.0 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein MtN3_slv PF03083.16 ORF26238 - 0.03 14.3 1.4 0.036 14.1 1.4 1.1 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange DUF971 PF06155.12 ORF25933 - 0.22 12.2 1.0 0.27 11.9 0.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF971) DUF2634 PF10934.8 ORF25014 - 0.018 15.1 2.7 0.02 15.0 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2634) DUF1538 PF07556.11 ORF24803 - 0.072 12.4 0.5 0.071 12.4 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1538) Col_cuticle_N PF01484.17 ORF24525 - 0.043 13.9 2.7 0.043 13.9 2.7 1.6 1 1 1 2 2 2 0 Nematode cuticle collagen N-terminal domain Ribosomal_L18p PF00861.22 ORF23934 - 0.086 13.2 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DUF4260 PF14079.6 ORF23597 - 0.021 14.8 0.4 0.025 14.6 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4260) Gln-synt_N PF03951.19 ORF23339 - 0.00052 19.7 0.3 0.0006 19.5 0.3 1.1 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Josephin PF02099.17 ORF23339 - 0.086 12.9 0.2 0.098 12.8 0.2 1.1 1 0 0 1 1 1 0 Josephin PigN PF04987.14 ORF23262 - 0.0015 17.5 0.2 0.0016 17.4 0.2 1.0 1 0 0 1 1 1 1 Phosphatidylinositolglycan class N (PIG-N) Orthoreo_P10 PF07204.11 ORF22966 - 0.012 15.6 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 EF-hand_1 PF00036.32 ORF22656 - 4.2e-17 60.3 0.7 1.4e-07 30.6 0.1 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF22656 - 1.4e-16 60.7 0.1 1.5e-16 60.6 0.1 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF22656 - 7.9e-14 50.3 0.1 1.3e-06 27.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF22656 - 3.7e-13 49.1 1.1 2.4e-06 27.3 0.3 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF22656 - 4.2e-13 48.1 0.8 1.1e-05 24.7 0.1 2.3 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF22656 - 0.00018 21.8 0.1 0.00021 21.6 0.1 1.0 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF22656 - 0.0003 21.0 0.0 0.00037 20.8 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF22656 - 0.0029 17.5 0.1 0.0031 17.4 0.1 1.1 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Lip_prot_lig_C PF10437.9 ORF22656 - 0.027 14.4 0.3 0.14 12.1 0.2 1.8 1 1 1 2 2 2 0 Bacterial lipoate protein ligase C-terminus PMBR PF09373.10 ORF22656 - 0.065 13.4 0.0 20 5.5 0.0 2.7 3 0 0 3 3 3 0 Pseudomurein-binding repeat Trehalase_Ca-bi PF07492.11 ORF22656 - 0.093 12.5 0.5 0.18 11.5 0.5 1.5 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain UPF0154 PF03672.13 ORF22656 - 0.21 11.6 0.0 0.28 11.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) zf-LITAF-like PF10601.9 ORF22379 - 3.1e-05 24.1 3.3 4e-05 23.8 3.3 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF4880 PF16220.5 ORF22182 - 0.56 10.1 3.2 0.58 10.1 0.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4880) DUF3796 PF12676.7 ORF21664 - 0.031 14.7 2.0 0.032 14.7 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3796) DUF4051 PF13260.6 ORF21664 - 0.75 9.6 3.3 1.4 8.7 3.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) DUF4014 PF13198.6 ORF21664 - 2.3 8.7 6.7 2.9 8.3 6.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4014) DUF2933 PF11666.8 ORF21664 - 7.2 6.7 9.7 4.9 7.3 3.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2933) Skp1_POZ PF03931.15 ORF20625 - 2.3e-07 30.9 0.1 5e-07 29.8 0.0 1.5 2 0 0 2 2 2 1 Skp1 family, tetramerisation domain DUF1365 PF07103.11 ORF20470 - 0.12 12.0 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1365) LIX1 PF14954.6 ORF2037 - 0.019 14.3 1.0 0.021 14.1 1.0 1.0 1 0 0 1 1 1 0 Limb expression 1 VPR PF00522.18 ORF2037 - 0.22 11.6 0.0 0.26 11.3 0.0 1.1 1 0 0 1 1 1 0 VPR/VPX protein ER_lumen_recept PF00810.18 ORF19542 - 0.0067 17.3 0.5 0.0067 17.3 0.5 1.0 1 0 0 1 1 1 1 ER lumen protein retaining receptor CheW PF01584.19 ORF19152 - 0.024 14.2 0.0 0.027 14.1 0.0 1.1 1 0 0 1 1 1 0 CheW-like domain PsbX PF06596.11 ORF19152 - 1.1 9.3 3.9 0.68 10.0 0.5 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) Response_reg PF00072.24 ORF19096 - 1e-10 41.7 0.0 1.1e-10 41.7 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Svf1 PF08622.10 ORF18799 - 0.18 11.8 0.0 0.19 11.8 0.0 1.0 1 0 0 1 1 1 0 Svf1-like N-terminal lipocalin domain Beta-TrCP_D PF12125.8 ORF1846 - 0.072 13.0 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 D domain of beta-TrCP Nitrate_red_gam PF02665.14 ORF18371 - 2.4e-24 86.1 1.1 2.6e-24 86.0 1.1 1.0 1 0 0 1 1 1 1 Nitrate reductase gamma subunit CHB_HEX_C PF03174.13 ORF1825 - 0.13 12.2 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Chitobiase/beta-hexosaminidase C-terminal domain Ank_2 PF12796.7 ORF18081 - 4.9e-05 23.8 0.1 5.9e-05 23.6 0.1 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF18081 - 0.00011 22.5 0.1 0.16 12.4 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF18081 - 0.002 18.6 0.1 0.0025 18.3 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF18081 - 0.0028 17.9 0.3 0.25 11.7 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF18081 - 0.011 16.2 0.2 0.2 12.3 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeat Ribosomal_S5_C PF03719.15 ORF18081 - 0.12 11.9 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S5, C-terminal domain zf-C2H2_10 PF16588.5 ORF17805 - 0.035 13.8 1.9 0.086 12.6 1.9 1.7 1 0 0 1 1 1 0 C2H2 zinc-finger CheW PF01584.19 ORF17786 - 0.049 13.3 0.0 0.057 13.0 0.0 1.0 1 0 0 1 1 1 0 CheW-like domain UL41A PF17591.2 ORF17537 - 0.12 12.5 3.9 0.29 11.3 3.8 1.6 1 1 0 1 1 1 0 Herpesvirus UL41A NifU PF01106.17 ORF16913 - 0.31 11.2 2.9 0.57 10.4 1.5 1.9 2 0 0 2 2 2 0 NifU-like domain ACBP PF00887.19 ORF16778 - 1.1e-15 57.6 0.2 1.2e-15 57.5 0.2 1.0 1 0 0 1 1 1 1 Acyl CoA binding protein HTH_micro PF17007.5 ORF16398 - 1.2 7.9 6.5 1.3 7.7 6.5 1.0 1 0 0 1 1 1 0 HTH-like HRG PF16954.5 ORF15525 - 0.16 12.4 3.1 0.21 12.0 3.1 1.1 1 0 0 1 1 1 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene Cys_rich_CPXG PF14255.6 ORF152841 - 0.0073 16.2 0.9 0.013 15.4 0.9 1.3 1 0 0 1 1 1 1 Cysteine-rich CPXCG YebO PF13974.6 ORF152551 - 0.53 10.4 3.0 0.59 10.2 2.3 1.4 2 0 0 2 2 2 0 YebO-like protein Med12-LCEWAV PF12145.8 ORF152447 - 0.36 9.6 1.1 0.39 9.5 1.1 1.0 1 0 0 1 1 1 0 Eukaryotic Mediator 12 subunit domain TSP_1 PF00090.19 ORF15241 - 0.064 13.5 1.5 0.94 9.8 0.5 2.1 2 0 0 2 2 2 0 Thrombospondin type 1 domain WW PF00397.26 ORF152329 - 1.3e-09 38.0 0.0 2.2e-09 37.2 0.0 1.4 1 0 0 1 1 1 1 WW domain DAP_B PF07930.12 ORF151555 - 2.2 8.2 4.3 2.2 8.2 4.3 1.0 1 0 0 1 1 1 0 D-aminopeptidase, domain B GNT-I PF03071.15 ORF151549 - 0.0041 15.9 0.1 0.0042 15.9 0.1 1.0 1 0 0 1 1 1 1 GNT-I family CheW PF01584.19 ORF151502 - 0.024 14.2 0.0 0.027 14.1 0.0 1.1 1 0 0 1 1 1 0 CheW-like domain PsbX PF06596.11 ORF151502 - 1.1 9.3 3.9 0.68 10.0 0.5 2.0 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) Synapsin_C PF02750.14 ORF151034 - 7.2e-07 28.9 0.0 8e-07 28.8 0.0 1.0 1 0 0 1 1 1 1 Synapsin, ATP binding domain DUF4210 PF13915.6 ORF150703 - 0.1 13.2 0.0 0.47 11.1 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4210) zf_PR_Knuckle PF18445.1 ORF150237 - 0.081 12.7 0.5 3.9 7.4 0.1 2.3 2 0 0 2 2 2 0 PR zinc knuckle motif MLANA PF14991.6 ORF150237 - 0.55 10.5 4.0 7.3 6.9 0.6 2.0 1 1 1 2 2 2 0 Protein melan-A BMF PF15185.6 ORF150165 - 0.28 10.9 2.0 0.34 10.6 2.0 1.1 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis MyTH4 PF00784.17 ORF149797 - 0.017 15.6 4.0 0.17 12.4 0.2 2.0 2 0 0 2 2 2 0 MyTH4 domain FERM_F1 PF18379.1 ORF149797 - 0.61 10.1 3.2 4.8 7.3 0.3 2.0 1 1 0 2 2 2 0 FERM F1 ubiquitin-like domain APO_RNA-bind PF05634.11 ORF149742 - 0.12 11.7 0.0 0.12 11.7 0.0 1.0 1 0 0 1 1 1 0 APO RNA-binding Pertus-S4-tox PF09275.10 ORF148117 - 0.031 14.6 0.0 0.033 14.5 0.0 1.1 1 0 0 1 1 1 0 Pertussis toxin S4 subunit GCS2 PF04107.13 ORF147451 - 0.04 13.3 0.1 0.044 13.1 0.1 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) Adipogenin PF15202.6 ORF147344 - 3 7.9 8.9 6.1 7.0 1.5 2.1 1 1 1 2 2 2 0 Adipogenin Ycf70 PF17382.2 ORF147227 - 0.52 10.7 3.0 0.52 10.7 2.3 1.3 1 1 0 1 1 1 0 Uncharacterized Ycf70-like TgMIC1 PF11476.8 ORF146440 - 0.12 12.1 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 PGP_phosphatase PF09419.10 ORF146227 - 0.15 11.7 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase TMEM208_SND2 PF05620.11 ORF145484 - 5 6.9 7.1 5.3 6.8 7.1 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 zf-LITAF-like PF10601.9 ORF14505 - 0.0049 17.1 3.8 0.0062 16.8 3.8 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain DUF5560 PF17715.1 ORF14500 - 0.014 14.9 0.2 0.015 14.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5560) Toxin_5 PF05294.13 ORF143842 - 0.74 10.3 15.1 1.1 9.8 2.7 3.2 1 1 2 3 3 3 0 Scorpion short toxin DUF321 PF03778.13 ORF143647 - 0.13 11.9 0.1 0.34 10.6 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF321) EF-hand_13 PF17958.1 ORF143217 - 0.024 14.4 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 EF-hand domain SAS-6_N PF16531.5 ORF143217 - 0.044 14.4 0.5 0.075 13.6 0.5 1.5 1 1 0 1 1 1 0 Centriolar protein SAS N-terminal KH_1 PF00013.29 ORF14309 - 6.9e-07 29.0 0.3 8.2e-07 28.8 0.3 1.1 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF14309 - 0.0012 18.6 0.5 0.0013 18.5 0.5 1.1 1 0 0 1 1 1 1 KH domain DUF5477 PF17571.2 ORF142463 - 0.067 13.4 0.0 0.087 13.0 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5477) EF-hand_6 PF13405.6 ORF141790 - 0.00015 21.4 0.0 0.00023 20.8 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF141790 - 0.00042 19.7 0.1 0.00062 19.1 0.1 1.3 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF141790 - 0.0013 19.2 2.5 0.15 12.5 0.1 1.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF141790 - 0.0057 16.1 0.4 0.0089 15.5 0.4 1.3 1 0 0 1 1 1 1 EF hand Nse5 PF08691.10 ORF141728 - 0.35 9.5 6.0 0.33 9.6 6.0 1.0 1 0 0 1 1 1 0 DNA repair proteins Nse5 and Nse6 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks395.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks395.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks395.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks395.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:40:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aim21 PF11489.8 ORF140536 - 0.27 10.1 3.0 0.27 10.1 3.0 1.0 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 21 Aminotran_3 PF00202.21 ORF140394 - 1.6e-12 46.9 0.0 1.7e-12 46.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Ribosomal_S27 PF01599.19 ORF140341 - 0.012 15.7 0.1 0.021 15.0 0.1 1.4 1 0 0 1 1 1 0 Ribosomal protein S27a VP_N-CPKC PF11475.8 ORF140341 - 0.14 12.0 2.7 0.39 10.7 0.9 2.2 1 1 1 2 2 2 0 Virion protein N terminal domain Pro-rich_19 PF15455.6 ORF140257 - 0.07 12.2 0.1 0.078 12.1 0.1 1.0 1 0 0 1 1 1 0 Proline-rich 19 GatB_N PF02934.15 ORF140145 - 0.041 13.3 0.3 0.047 13.1 0.3 1.0 1 0 0 1 1 1 0 GatB/GatE catalytic domain CNOT1_TTP_bind PF16417.5 ORF1400 - 0.0062 15.7 0.2 0.0065 15.7 0.2 1.1 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain Herpes_UL69 PF05459.12 ORF139845 - 0.042 13.2 0.7 0.041 13.2 0.7 1.2 1 0 0 1 1 1 0 Herpesvirus transcriptional regulator family ERGIC_N PF13850.6 ORF13964 - 0.0041 17.4 0.3 0.0052 17.1 0.3 1.3 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) FemAB PF02388.16 ORF13964 - 0.14 11.1 0.1 0.15 10.9 0.1 1.0 1 0 0 1 1 1 0 FemAB family MRP-S27 PF10037.9 ORF13910 - 0.054 12.4 0.0 0.06 12.2 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 zf-C2HC5 PF06221.13 ORF139054 - 0.12 12.4 0.6 0.22 11.6 0.6 1.4 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type FemAB PF02388.16 ORF13880 - 0.57 9.0 3.2 0.62 8.9 3.2 1.0 1 0 0 1 1 1 0 FemAB family DZR PF12773.7 ORF138293 - 0.086 12.9 3.9 0.16 12.0 3.9 1.5 1 1 0 1 1 1 0 Double zinc ribbon zf-RING_5 PF14634.6 ORF138293 - 0.12 12.4 4.3 14 5.7 0.2 3.0 3 0 0 3 3 3 0 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF138293 - 1.6 8.4 8.1 0.27 10.9 4.0 1.7 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type UPAR_LY6 PF00021.21 ORF137963 - 0.069 13.9 0.2 0.08 13.7 0.2 1.1 1 0 0 1 1 1 0 u-PAR/Ly-6 domain Cleaved_Adhesin PF07675.11 ORF137963 - 0.13 12.2 0.1 0.2 11.6 0.1 1.4 1 1 1 2 2 2 0 Cleaved Adhesin Domain A2L_zn_ribbon PF08792.10 ORF137790 - 0.021 14.5 0.4 0.079 12.7 0.1 2.0 2 0 0 2 2 2 0 A2L zinc ribbon domain CD225 PF04505.12 ORF137710 - 0.05 13.7 0.1 0.069 13.3 0.1 1.3 1 0 0 1 1 1 0 Interferon-induced transmembrane protein Imm3 PF14425.6 ORF137191 - 0.025 14.6 0.2 0.03 14.4 0.2 1.0 1 0 0 1 1 1 0 Immunity protein Imm3 HTH_16 PF12645.7 ORF136957 - 0.092 12.8 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain zf-CCCH_2 PF14608.6 ORF136884 - 0.06 13.8 1.6 0.12 12.8 1.6 1.6 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger RsfS PF02410.15 ORF136263 - 4.8e-22 78.2 0.1 5.3e-22 78.1 0.1 1.0 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation DUF1509 PF07420.11 ORF135910 - 3.7 6.4 9.6 4.2 6.2 9.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Myb_DNA-binding PF00249.31 ORF135757 - 3.6e-18 65.5 4.7 3.5e-15 55.9 0.2 2.0 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF135757 - 4e-12 46.2 0.3 4.5e-12 46.0 0.3 1.0 1 0 0 1 1 1 1 Myb-like DNA-binding domain SLIDE PF09111.10 ORF135757 - 0.016 15.2 0.0 0.036 14.1 0.0 1.6 1 1 1 2 2 2 0 SLIDE Rap1_C PF11626.8 ORF135757 - 0.059 13.5 3.1 4.5 7.4 0.1 2.1 1 1 1 2 2 2 0 TRF2-interacting telomeric protein/Rap1 - C terminal domain DUF5388 PF17363.2 ORF135238 - 4.5 7.5 8.5 7.7 6.8 0.7 2.9 1 1 2 3 3 3 0 Family of unknown function (DUF5388) SNARE_assoc PF09335.11 ORF135126 - 0.098 13.1 0.0 0.1 13.1 0.0 1.0 1 0 0 1 1 1 0 SNARE associated Golgi protein RGS12_us2 PF16611.5 ORF134501 - 0.0042 17.4 0.2 0.0058 17.0 0.2 1.4 1 1 0 1 1 1 1 Unstructured region between RBD and GoLoco DUF5063 PF16702.5 ORF133665 - 0.0004 20.8 0.1 0.0004 20.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5063) KH_1 PF00013.29 ORF132214 - 6.9e-07 29.0 0.3 8.2e-07 28.8 0.3 1.1 1 0 0 1 1 1 1 KH domain KH_2 PF07650.17 ORF132214 - 0.0012 18.6 0.5 0.0013 18.5 0.5 1.1 1 0 0 1 1 1 1 KH domain DUF3029 PF11230.8 ORF130950 - 1.5e-19 69.7 0.1 1.7e-19 69.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3029) SNARE PF05739.19 ORF130882 - 0.33 11.0 0.5 0.33 11.0 0.5 1.6 2 0 0 2 2 2 0 SNARE domain Tugs PF17840.1 ORF130776 - 0.6 10.3 4.9 0.48 10.7 2.7 1.9 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain DUF4738 PF15889.5 ORF13059 - 0.037 13.9 0.2 0.054 13.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4738) DUF3577 PF12101.8 ORF129723 - 0.1 12.4 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3577) REPA_OB_2 PF16900.5 ORF129691 - 0.0058 16.5 0.3 0.0077 16.1 0.3 1.2 1 0 0 1 1 1 1 Replication protein A OB domain PBP1_TM PF14812.6 ORF128989 - 3.8 8.0 9.8 4.4 7.7 9.8 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal FAM176 PF14851.6 ORF128989 - 3.8 7.2 8.7 4 7.1 8.7 1.1 1 0 0 1 1 1 0 FAM176 family DUF1660 PF07874.11 ORF128431 - 0.12 12.9 0.7 0.17 12.4 0.7 1.2 1 0 0 1 1 1 0 Prophage protein (DUF1660) DUF3918 PF13056.6 ORF12834 - 0.065 12.9 2.9 0.11 12.1 2.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) Succ_DH_flav_C PF02910.20 ORF128059 - 1.9e-16 60.2 0.1 2.1e-16 60.1 0.1 1.0 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term CLAMP PF14769.6 ORF128015 - 0.042 14.3 0.2 0.11 13.0 0.2 1.6 1 1 0 1 1 1 0 Flagellar C1a complex subunit C1a-32 Imm30 PF15565.6 ORF128015 - 0.073 13.1 0.1 0.093 12.8 0.1 1.2 1 0 0 1 1 1 0 Immunity protein 30 DUF4131 PF13567.6 ORF127768 - 1.9 8.1 5.7 2.2 7.9 5.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2269 PF10027.9 ORF127768 - 6.6 6.8 9.3 9.5 6.3 0.3 2.1 1 1 1 2 2 2 0 Predicted integral membrane protein (DUF2269) Bowman-Birk_leg PF00228.20 ORF127190 - 0.0078 16.6 5.5 0.82 10.1 1.7 2.6 2 0 0 2 2 2 2 Bowman-Birk serine protease inhibitor family U1snRNP70_N PF12220.8 ORF126823 - 0.00029 21.4 0.0 0.00035 21.2 0.0 1.2 1 0 0 1 1 1 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal FixQ PF05545.11 ORF126607 - 0.021 14.8 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF2157 PF09925.9 ORF126607 - 0.027 14.3 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF5388 PF17363.2 ORF126377 - 4.5 7.5 8.5 7.7 6.8 0.7 2.9 1 1 2 3 3 3 0 Family of unknown function (DUF5388) Herpes_capsid PF06112.11 ORF126354 - 4.2 7.4 9.0 4.5 7.3 9.0 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF1129 PF06570.11 ORF126198 - 0.023 14.2 0.3 0.023 14.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) ERGIC_N PF13850.6 ORF126198 - 0.061 13.7 0.1 0.075 13.4 0.1 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) NOC3p PF07540.11 ORF125683 - 0.11 13.0 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Nucleolar complex-associated protein SHIPPO-rpt PF07004.12 ORF125073 - 0.066 14.1 0.6 0.12 13.3 0.6 1.5 1 0 0 1 1 1 0 Sperm-tail PG-rich repeat Tmem26 PF09772.9 ORF12502 - 0.0082 15.5 1.4 0.0094 15.3 1.4 1.0 1 0 0 1 1 1 1 Transmembrane protein 26 EndIII_4Fe-2S PF10576.9 ORF124565 - 0.052 13.9 0.3 0.052 13.9 0.3 2.0 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III VHS PF00790.19 ORF124536 - 1.2e-12 47.9 0.7 1.3e-12 47.8 0.7 1.0 1 0 0 1 1 1 1 VHS domain Pertus-S5-tox PF09276.10 ORF123613 - 0.13 12.3 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Pertussis toxin S5 subunit GPI2 PF06432.11 ORF123491 - 0.031 13.7 0.5 0.031 13.7 0.5 1.0 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase Bowman-Birk_leg PF00228.20 ORF121949 - 0.0078 16.6 5.5 0.82 10.1 1.7 2.6 2 0 0 2 2 2 2 Bowman-Birk serine protease inhibitor family Phage_P2_GpE PF06528.12 ORF12173 - 0.025 14.1 0.3 0.23 11.1 0.0 2.1 2 0 0 2 2 2 0 Phage P2 GpE DUF2678 PF10856.8 ORF121622 - 0.014 15.4 4.4 0.015 15.2 4.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) SLR1-BP PF07333.12 ORF120468 - 0.016 15.6 0.7 0.024 15.1 0.7 1.5 1 1 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) DUF4701 PF15773.5 ORF120093 - 0.011 14.8 2.0 0.012 14.7 2.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4701) T_cell_tran_alt PF15128.6 ORF119845 - 0.05 13.4 0.1 0.055 13.3 0.1 1.2 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF5090 PF17009.5 ORF119845 - 4.3 7.3 9.1 4.8 7.1 9.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) pXO2-72 PF17443.2 ORF119730 - 0.011 16.0 0.1 0.018 15.3 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein pXO2-72 NDUF_B4 PF07225.12 ORF119656 - 0.1 12.5 0.3 0.11 12.4 0.3 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) EndIII_4Fe-2S PF10576.9 ORF119081 - 0.052 13.9 0.3 0.052 13.9 0.3 2.0 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III LRR_adjacent PF08191.11 ORF118990 - 0.042 14.1 0.3 0.077 13.2 0.2 1.4 1 1 0 1 1 1 0 LRR adjacent Dimer_Tnp_hAT PF05699.14 ORF11892 - 0.29 10.9 2.4 0.25 11.1 1.2 1.4 1 1 0 1 1 1 0 hAT family C-terminal dimerisation region T_cell_tran_alt PF15128.6 ORF118807 - 0.05 13.4 0.1 0.055 13.3 0.1 1.2 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF5090 PF17009.5 ORF118807 - 4.3 7.3 9.1 4.8 7.1 9.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) TB2_DP1_HVA22 PF03134.19 ORF118790 - 0.035 14.0 4.5 0.041 13.8 4.5 1.2 1 0 0 1 1 1 0 TB2/DP1, HVA22 family DUF1639 PF07797.14 ORF118728 - 0.78 9.8 0.0 0.78 9.8 0.0 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1639) Adeno_E3_CR2 PF02439.15 ORF118348 - 0.021 14.6 5.6 0.043 13.6 5.6 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Glycophorin_A PF01102.18 ORF118348 - 0.053 13.8 0.2 0.06 13.6 0.2 1.0 1 0 0 1 1 1 0 Glycophorin A SLC35F PF06027.12 ORF118113 - 0.1 12.1 6.5 0.12 11.9 6.5 1.0 1 0 0 1 1 1 0 Solute carrier family 35 Pox_A32 PF04665.12 ORF117393 - 0.012 15.1 0.0 0.013 14.9 0.0 1.0 1 0 0 1 1 1 0 Poxvirus A32 protein Beta-TrCP_D PF12125.8 ORF117045 - 0.072 13.0 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 D domain of beta-TrCP VESA1_N PF12785.7 ORF116947 - 0.31 10.0 11.0 0.29 10.0 11.0 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Arf PF00025.21 ORF116881 - 9.3e-20 70.8 0.0 1e-19 70.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MeaB PF03308.16 ORF116881 - 0.032 13.2 0.0 0.035 13.1 0.0 1.0 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Orthoreo_P10 PF07204.11 ORF116589 - 0.13 12.2 5.3 0.22 11.5 5.2 1.6 1 1 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DUF2418 PF10332.9 ORF116589 - 2.2 8.9 7.6 2.3 8.8 7.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) COX17 PF05051.13 ORF116267 - 7.3e-16 58.3 8.2 8.9e-16 58.0 8.2 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase copper chaperone (COX17) PGP_phosphatase PF09419.10 ORF115656 - 0.15 11.7 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase Beta-TrCP_D PF12125.8 ORF115588 - 0.072 13.0 0.1 0.13 12.2 0.1 1.5 1 1 0 1 1 1 0 D domain of beta-TrCP PyrI PF01948.18 ORF115212 - 0.029 14.6 2.0 0.035 14.4 2.0 1.3 1 0 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, allosteric domain DUF4658 PF15555.6 ORF115192 - 0.0019 18.3 1.4 0.0022 18.1 1.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) C_Hendra PF16821.5 ORF114743 - 0.31 10.9 3.5 0.35 10.7 3.5 1.1 1 0 0 1 1 1 0 C protein from hendra and measles viruses SLR1-BP PF07333.12 ORF114567 - 0.016 15.6 0.7 0.024 15.1 0.7 1.5 1 1 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) INTAP PF16617.5 ORF114375 - 0.033 14.6 5.1 0.04 14.3 5.1 1.1 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region Eapp_C PF10238.9 ORF112664 - 0.45 10.6 4.6 0.56 10.3 4.6 1.1 1 0 0 1 1 1 0 E2F-associated phosphoprotein Thioredoxin_4 PF13462.6 ORF111315 - 0.0038 17.4 0.0 0.0044 17.2 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF111315 - 0.036 13.8 0.0 0.037 13.8 0.0 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Herpes_PAP PF03325.13 ORF111315 - 0.16 11.6 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus polymerase accessory protein MASE4 PF17158.4 ORF111309 - 0.0032 16.8 0.8 0.0039 16.5 0.8 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain Metallothio_PEC PF02068.16 ORF111069 - 0.0083 16.5 0.9 0.0083 16.5 0.9 1.5 1 1 0 1 1 1 1 Plant PEC family metallothionein Mito_carr PF00153.27 ORF110574 - 6.1e-09 35.7 0.0 6e-06 26.1 0.0 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein Pterin_4a PF01329.19 ORF110545 - 2.4e-17 62.9 0.0 2.9e-17 62.6 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase OHA PF14418.6 ORF110527 - 0.079 12.8 0.0 0.092 12.6 0.0 1.2 1 0 0 1 1 1 0 OST-HTH Associated domain Flavi_capsid PF01003.19 ORF110288 - 0.17 11.7 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Flavivirus capsid protein C DUF3361 PF11841.8 ORF108553 - 0.0033 17.4 0.3 0.0034 17.3 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3361) HIF-1a_CTAD PF08778.10 ORF108553 - 0.079 12.6 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 HIF-1 alpha C terminal transactivation domain Ribosomal_L18p PF00861.22 ORF108466 - 0.086 13.2 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast zinc_ribbon_4 PF13717.6 ORF108455 - 0.0034 17.3 3.8 0.017 15.1 0.0 2.4 3 0 0 3 3 3 2 zinc-ribbon domain FemAB PF02388.16 ORF106934 - 0.57 9.0 3.2 0.62 8.9 3.2 1.0 1 0 0 1 1 1 0 FemAB family DUF3762 PF12591.8 ORF105341 - 0.024 14.9 1.4 0.029 14.6 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3762) GyrB_insert PF18053.1 ORF105125 - 0.16 11.8 0.0 0.17 11.8 0.0 1.0 1 0 0 1 1 1 0 DNA gyrase B subunit insert domain SLC3A2_N PF16028.5 ORF105026 - 0.0016 17.9 0.3 0.002 17.6 0.3 1.1 1 0 0 1 1 1 1 Solute carrier family 3 member 2 N-terminus Elong_Iki1 PF10483.9 ORF104926 - 0.056 12.9 0.0 0.059 12.9 0.0 1.0 1 0 0 1 1 1 0 Elongator subunit Iki1 DUF1378 PF07125.11 ORF104892 - 0.085 13.0 1.5 0.12 12.6 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) ASC PF00858.24 ORF104892 - 2 7.3 5.8 2.1 7.2 5.8 1.0 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel SLR1-BP PF07333.12 ORF104890 - 0.016 15.6 0.7 0.024 15.1 0.7 1.5 1 1 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) ExoD PF06055.12 ORF104309 - 0.0059 16.0 0.1 0.0063 15.9 0.1 1.0 1 0 0 1 1 1 1 Exopolysaccharide synthesis, ExoD ECSCR PF15820.5 ORF103050 - 0.0061 16.4 2.7 0.0061 16.4 2.7 1.1 1 0 0 1 1 1 1 Endothelial cell-specific chemotaxis regulator SP_C-Propep PF08999.10 ORF103050 - 0.034 13.9 7.9 0.043 13.6 7.9 1.2 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide SecY PF00344.20 ORF103050 - 0.034 13.4 1.2 0.031 13.5 1.2 1.0 1 0 0 1 1 1 0 SecY translocase ODV-E18 PF10717.9 ORF103050 - 0.052 13.4 0.5 0.052 13.4 0.5 1.3 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 MTABC_N PF16185.5 ORF103050 - 0.087 12.3 1.1 0.09 12.3 1.1 1.0 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region DUF3357 PF11837.8 ORF103050 - 0.088 13.3 2.0 0.091 13.2 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) Baculo_11_kDa PF06143.11 ORF103050 - 0.14 11.7 5.9 0.18 11.4 5.9 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family NICE-3 PF07406.11 ORF103050 - 0.15 12.1 2.3 0.17 11.9 2.3 1.1 1 0 0 1 1 1 0 NICE-3 protein EphA2_TM PF14575.6 ORF103050 - 0.17 12.8 2.4 0.19 12.6 2.4 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Amnionless PF14828.6 ORF103050 - 0.24 10.2 1.0 0.24 10.2 1.0 1.0 1 0 0 1 1 1 0 Amnionless TMEM156 PF15106.6 ORF103050 - 0.24 10.8 1.2 0.26 10.7 1.2 1.1 1 0 0 1 1 1 0 TMEM156 protein family DUF929 PF06053.11 ORF103050 - 0.28 10.5 2.8 0.28 10.5 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) Shisa PF13908.6 ORF103050 - 0.41 10.9 2.0 0.42 10.8 2.0 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator TMEM154 PF15102.6 ORF103050 - 5.9 6.8 5.1 7 6.6 5.1 1.2 1 0 0 1 1 1 0 TMEM154 protein family DUF1129 PF06570.11 ORF102862 - 0.023 14.2 0.3 0.023 14.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) ERGIC_N PF13850.6 ORF102862 - 0.061 13.7 0.1 0.075 13.4 0.1 1.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) OHA PF14418.6 ORF102605 - 0.079 12.8 0.0 0.092 12.6 0.0 1.2 1 0 0 1 1 1 0 OST-HTH Associated domain LINES_N PF14694.6 ORF102498 - 0.0017 17.9 1.1 0.0017 17.9 1.1 1.0 1 0 0 1 1 1 1 Lines N-terminus DUF5439 PF17507.2 ORF102498 - 0.01 16.0 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5439) DUF2706 PF10913.8 ORF102383 - 0.013 15.3 1.3 0.014 15.2 0.4 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2706) Ac81 PF05820.11 ORF102383 - 0.17 11.4 1.7 0.19 11.3 1.7 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 TRAM_2 PF18693.1 ORF102257 - 0.013 15.7 0.0 0.018 15.2 0.0 1.2 1 0 0 1 1 1 0 TRAM domain EF-hand_1 PF00036.32 ORF101885 - 4.2e-17 60.3 0.7 1.4e-07 30.6 0.1 2.1 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF101885 - 1.4e-16 60.7 0.1 1.5e-16 60.6 0.1 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF101885 - 7.9e-14 50.3 0.1 1.3e-06 27.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF101885 - 3.7e-13 49.1 1.1 2.4e-06 27.3 0.3 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF101885 - 4.2e-13 48.1 0.8 1.1e-05 24.7 0.1 2.3 2 0 0 2 2 2 2 EF hand SPARC_Ca_bdg PF10591.9 ORF101885 - 0.00018 21.8 0.1 0.00021 21.6 0.1 1.0 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF101885 - 0.0003 21.0 0.0 0.00037 20.8 0.0 1.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF101885 - 0.0029 17.5 0.1 0.0031 17.4 0.1 1.1 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Lip_prot_lig_C PF10437.9 ORF101885 - 0.027 14.4 0.3 0.14 12.1 0.2 1.8 1 1 1 2 2 2 0 Bacterial lipoate protein ligase C-terminus PMBR PF09373.10 ORF101885 - 0.065 13.4 0.0 20 5.5 0.0 2.7 3 0 0 3 3 3 0 Pseudomurein-binding repeat Trehalase_Ca-bi PF07492.11 ORF101885 - 0.093 12.5 0.5 0.18 11.5 0.5 1.5 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain UPF0154 PF03672.13 ORF101885 - 0.21 11.6 0.0 0.28 11.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) Vta1 PF04652.16 ORF101248 - 0.023 14.7 0.1 0.023 14.7 0.1 1.0 1 0 0 1 1 1 0 Vta1 like DUF3918 PF13056.6 ORF101123 - 0.1 12.2 1.0 0.16 11.6 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) Hormone_6 PF00236.18 ORF10095 - 0.33 11.0 3.5 0.9 9.6 0.9 2.0 1 1 1 2 2 2 0 Glycoprotein hormone zf-C2HC5 PF06221.13 ORF100449 - 0.12 12.4 0.6 0.22 11.6 0.6 1.4 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type TBK1_ULD PF18396.1 ORF100334 - 0.023 14.6 1.3 0.029 14.3 1.3 1.2 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain Clostridium_P47 PF06597.11 NODE_78319_length_202_cov_0.784431_g70378_i0forward_frame_1 - 0.91 8.2 7.4 0.99 8.0 7.4 1.0 1 0 0 1 1 1 0 Clostridium P-47 protein EOS1 PF12326.8 NODE_78319_length_202_cov_0.784431_g70378_i0forward_frame_1 - 4.6 7.1 7.3 5.8 6.8 7.3 1.2 1 0 0 1 1 1 0 N-glycosylation protein DUF2207 PF09972.9 NODE_78319_length_202_cov_0.784431_g70378_i0forward_frame_1 - 7.2 5.2 10.2 8 5.1 10.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4191 PF13829.6 NODE_78319_length_202_cov_0.784431_g70378_i0forward_frame_1 - 9 5.6 6.7 9.8 5.4 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) IMUP PF15761.5 NODE_78310_length_202_cov_0.946108_g70369_i0forward_frame_1 - 0.0037 17.9 0.3 0.0041 17.8 0.3 1.1 1 0 0 1 1 1 1 Immortalisation up-regulated protein Sec62 PF03839.16 NODE_78309_length_202_cov_0.952096_g70368_i0reverse_frame_1 - 8 5.9 4.9 9.1 5.7 4.9 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 PepSY_TM_like_2 PF16357.5 NODE_78305_length_202_cov_0.952096_g70364_i0forward_frame_1 - 0.11 12.4 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative PepSY_TM-like Transket_pyr PF02779.24 NODE_78302_length_202_cov_0.952096_g70361_i0reverse_frame_1 - 0.12 12.1 0.0 0.13 12.0 0.0 1.0 1 0 0 1 1 1 0 Transketolase, pyrimidine binding domain HscB_4_cys PF18256.1 NODE_78298_length_202_cov_0.958084_g70357_i0forward_frame_1 - 0.13 12.1 3.0 0.24 11.3 3.0 1.4 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif APC_u14 PF16635.5 NODE_78288_length_202_cov_0.958084_g70347_i0forward_frame_1 - 0.061 13.9 1.0 0.061 13.9 1.0 1.4 2 0 0 2 2 2 0 Unstructured region on APC between SAMP and APC_crr Helo_like_N PF17111.5 NODE_78288_length_202_cov_0.958084_g70347_i0forward_frame_1 - 0.16 11.3 0.1 0.19 11.1 0.1 1.1 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins FeThRed_A PF02941.15 NODE_78277_length_202_cov_0.958084_g70336_i0reverse_frame_1 - 0.12 12.5 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase variable alpha chain SR-25 PF10500.9 NODE_78267_length_202_cov_0.958084_g70326_i0reverse_frame_1 - 0.96 9.0 3.8 0.91 9.1 3.8 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein YqzH PF14164.6 NODE_78263_length_202_cov_0.976048_g70322_i0forward_frame_1 - 0.067 13.3 0.0 0.087 12.9 0.0 1.1 1 0 0 1 1 1 0 YqzH-like protein CTD_bind PF04818.13 NODE_78262_length_202_cov_0.982036_g70321_i0forward_frame_1 - 0.16 12.8 0.0 0.18 12.6 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase II-binding domain. MFMR PF07777.11 NODE_78259_length_202_cov_0.994012_g70318_i0forward_frame_1 - 0.079 13.5 0.0 0.085 13.4 0.0 1.1 1 0 0 1 1 1 0 G-box binding protein MFMR YSIRK_signal PF04650.17 NODE_78258_length_202_cov_1.000000_g70317_i0forward_frame_1 - 1.1 9.2 4.7 1.5 8.7 0.9 2.4 2 0 0 2 2 2 0 YSIRK type signal peptide DUF1600 PF07667.11 NODE_78242_length_202_cov_1.065868_g70301_i0forward_frame_1 - 0.027 14.7 6.7 0.03 14.5 6.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) GTP_cyclohydro2 PF00925.20 NODE_78238_length_202_cov_1.107784_g70297_i0forward_frame_1 - 0.21 11.2 0.1 0.23 11.0 0.1 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase II DUF4672 PF15716.5 NODE_78237_length_202_cov_1.107784_g70296_i0reverse_frame_1 - 0.021 14.5 1.0 0.022 14.4 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) E1-E2_ATPase PF00122.20 NODE_78235_length_202_cov_1.113772_g70294_i0forward_frame_1 - 0.31 10.5 0.8 0.35 10.4 0.8 1.0 1 0 0 1 1 1 0 E1-E2 ATPase Lamprin PF06403.11 NODE_78225_length_202_cov_1.173653_g70284_i0forward_frame_1 - 0.00051 20.0 4.8 0.00057 19.9 4.8 1.1 1 0 0 1 1 1 1 Lamprin MVL PF12151.8 NODE_78216_length_202_cov_1.185629_g70275_i0forward_frame_1 - 0.13 12.1 0.8 0.29 11.0 0.8 1.6 1 0 0 1 1 1 0 Mannan-binding protein DUF4536 PF15055.6 NODE_78213_length_202_cov_1.197605_g70272_i0reverse_frame_1 - 0.58 10.4 4.1 0.9 9.8 4.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4536) DUF2576 PF10845.8 NODE_78210_length_202_cov_1.197605_g70269_i0forward_frame_1 - 0.052 13.2 2.5 0.79 9.4 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2576) Glyco_trans_1_4 PF13692.6 NODE_78206_length_202_cov_1.239521_g70265_i0reverse_frame_1 - 0.15 12.5 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 NARP1 PF12569.8 NODE_78198_length_202_cov_1.275449_g70257_i0reverse_frame_1 - 4.9 5.9 8.3 5.5 5.8 8.3 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 SH3_13 PF18335.1 NODE_78188_length_202_cov_1.323353_g70247_i0forward_frame_1 - 0.0071 16.2 0.1 0.0079 16.0 0.1 1.2 1 0 0 1 1 1 1 ATP-dependent RecD-like DNA helicase SH3 domain A2L_zn_ribbon PF08792.10 NODE_78183_length_202_cov_1.341317_g70242_i0forward_frame_1 - 0.15 11.8 0.2 0.15 11.8 0.2 2.7 3 0 0 3 3 3 0 A2L zinc ribbon domain SSXRD PF09514.10 NODE_78180_length_202_cov_1.353293_g70239_i0reverse_frame_1 - 1.2 8.7 3.7 2.3 7.9 3.7 1.5 1 0 0 1 1 1 0 SSXRD motif PHTB1_N PF14727.6 NODE_78174_length_202_cov_1.377246_g70233_i0forward_frame_1 - 0.085 12.2 0.0 0.088 12.1 0.0 1.0 1 0 0 1 1 1 0 PTHB1 N-terminus DUF2239 PF09998.9 NODE_78170_length_202_cov_1.401198_g70229_i0reverse_frame_1 - 0.11 12.3 0.6 0.12 12.1 0.6 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2239) Tmemb_55A PF09788.9 NODE_78166_length_202_cov_1.407186_g70225_i0forward_frame_1 - 0.014 14.5 0.5 0.015 14.4 0.5 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A zf-FPG_IleRS PF06827.14 NODE_78152_length_202_cov_1.437126_g70211_i0reverse_frame_1 - 0.0039 17.0 0.6 0.052 13.4 0.1 2.3 2 0 0 2 2 2 1 Zinc finger found in FPG and IleRS PhnA_Zn_Ribbon PF08274.12 NODE_78152_length_202_cov_1.437126_g70211_i0reverse_frame_1 - 0.053 13.5 1.9 0.67 10.0 0.1 2.4 3 0 0 3 3 3 0 PhnA Zinc-Ribbon MRP-S33 PF08293.11 NODE_78148_length_202_cov_1.437126_g70207_i0reverse_frame_1 - 0.09 13.0 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit S27 DsrD PF08679.11 NODE_78146_length_202_cov_1.437126_g70205_i0reverse_frame_1 - 0.085 13.1 0.2 0.098 12.9 0.2 1.1 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) SAYSvFN PF10260.9 NODE_78144_length_202_cov_1.461078_g70203_i0forward_frame_1 - 0.037 13.9 0.6 0.048 13.6 0.6 1.2 1 0 0 1 1 1 0 Uncharacterized conserved domain (SAYSvFN) UPF0524 PF15823.5 NODE_78143_length_202_cov_1.467066_g70202_i0reverse_frame_1 - 0.36 10.2 3.1 0.4 10.0 3.1 1.0 1 0 0 1 1 1 0 UPF0524 of C3orf70 TssN PF17555.2 NODE_78143_length_202_cov_1.467066_g70202_i0forward_frame_1 - 6.9 6.0 7.9 7.4 5.9 7.9 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF5556 PF17711.1 NODE_78138_length_202_cov_1.502994_g70197_i0forward_frame_1 - 0.0084 16.1 0.1 0.0084 16.1 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5556) LktC PF06261.11 NODE_78126_length_202_cov_1.562874_g70185_i0reverse_frame_1 - 0.0091 15.9 0.2 0.0093 15.9 0.2 1.0 1 0 0 1 1 1 1 Actinobacillus actinomycetemcomitans leukotoxin activator LktC Chloroa_b-bind PF00504.21 NODE_78123_length_202_cov_1.610778_g70182_i0reverse_frame_1 - 5.2e-05 23.8 0.0 8.2e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Chlorophyll A-B binding protein DUF1639 PF07797.14 NODE_78112_length_202_cov_1.670659_g70171_i0reverse_frame_1 - 0.016 15.2 0.1 0.021 14.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) Toxin_37 PF11415.8 NODE_78104_length_202_cov_1.682635_g70163_i0forward_frame_1 - 0.045 13.6 0.3 0.087 12.7 0.3 1.4 1 0 0 1 1 1 0 Antifungal peptide termicin TSP_1 PF00090.19 NODE_78101_length_202_cov_1.700599_g70160_i0reverse_frame_1 - 0.11 12.8 0.1 0.15 12.3 0.1 1.2 1 0 0 1 1 1 0 Thrombospondin type 1 domain Lamprin PF06403.11 NODE_78101_length_202_cov_1.700599_g70160_i0forward_frame_1 - 0.078 12.9 1.9 0.097 12.6 1.9 1.2 1 0 0 1 1 1 0 Lamprin DUF2175 PF09943.9 NODE_78091_length_202_cov_1.790419_g70150_i0forward_frame_1 - 0.14 12.5 1.8 0.32 11.3 1.8 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) C12orf66_like PF09404.10 NODE_78084_length_202_cov_1.832335_g70143_i0reverse_frame_1 - 0.094 11.5 0.8 0.1 11.4 0.8 1.0 1 0 0 1 1 1 0 KICSTOR complex C12orf66 like Golgin_A5 PF09787.9 NODE_78082_length_202_cov_1.856287_g70141_i0reverse_frame_1 - 4.8 6.6 6.3 5.3 6.4 6.3 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 Lamprin PF06403.11 NODE_78077_length_202_cov_1.880240_g70136_i0forward_frame_1 - 0.54 10.2 20.0 0.11 12.5 10.0 2.0 1 1 1 2 2 2 0 Lamprin Clathrin_bdg PF15045.6 NODE_78073_length_202_cov_1.910180_g70132_i0forward_frame_1 - 0.0095 15.9 1.8 0.051 13.6 0.4 2.1 1 1 1 2 2 2 1 Clathrin-binding box of Aftiphilin, vesicle trafficking SHP PF03579.13 NODE_78068_length_202_cov_1.916168_g70127_i0reverse_frame_1 - 0.028 14.4 0.2 0.032 14.2 0.2 1.2 1 0 0 1 1 1 0 Small hydrophobic protein Man-6-P_recep PF02157.15 NODE_78060_length_202_cov_1.994012_g70119_i0forward_frame_1 - 0.11 11.5 0.4 0.1 11.7 0.4 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate receptor zf-Tim10_DDP PF02953.15 NODE_78057_length_202_cov_2.005988_g70116_i0reverse_frame_1 - 0.011 15.4 0.1 0.017 14.8 0.1 1.3 1 0 0 1 1 1 0 Tim10/DDP family zinc finger PilJ PF13675.6 NODE_78053_length_202_cov_2.041916_g70112_i0reverse_frame_1 - 0.0026 17.7 0.1 0.0032 17.5 0.1 1.1 1 0 0 1 1 1 1 Type IV pili methyl-accepting chemotaxis transducer N-term BLOC1_2 PF10046.9 NODE_78053_length_202_cov_2.041916_g70112_i0reverse_frame_1 - 0.021 15.1 1.0 0.025 14.9 1.0 1.0 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cortex-I_coil PF09304.10 NODE_78053_length_202_cov_2.041916_g70112_i0reverse_frame_1 - 0.046 13.9 1.0 0.055 13.7 1.0 1.1 1 0 0 1 1 1 0 Cortexillin I, coiled coil E2F_CC-MB PF16421.5 NODE_78053_length_202_cov_2.041916_g70112_i0reverse_frame_1 - 0.74 10.2 4.2 1.4 9.4 4.3 1.4 1 1 0 1 1 1 0 E2F transcription factor CC-MB domain DUF5431 PF17496.2 NODE_78046_length_202_cov_2.077844_g70105_i0forward_frame_1 - 0.026 14.7 0.1 0.033 14.3 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5431) Peptidase_M16 PF00675.20 NODE_78044_length_202_cov_2.107784_g70103_i0forward_frame_1 - 4.8e-18 65.6 0.0 5.4e-18 65.4 0.0 1.1 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) MtaB PF12176.8 NODE_78040_length_202_cov_2.137725_g70099_i0forward_frame_1 - 0.21 10.3 1.2 0.23 10.2 1.2 1.0 1 0 0 1 1 1 0 Methanol-cobalamin methyltransferase B subunit Opy2 PF09463.10 NODE_78038_length_202_cov_2.137725_g70097_i0reverse_frame_1 - 0.045 14.1 10.9 0.79 10.1 4.5 2.2 2 0 0 2 2 2 0 Opy2 protein GAS PF13851.6 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.00028 20.3 2.7 0.00033 20.1 2.7 1.1 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding DUF2046 PF09755.9 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.0012 18.1 1.2 0.0013 18.0 1.2 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein H4 (DUF2046) Occludin_ELL PF07303.13 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.0035 18.1 4.5 0.0041 17.8 4.5 1.1 1 0 0 1 1 1 1 Occludin homology domain RmuC PF02646.16 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.0099 15.0 1.7 0.011 14.9 1.7 1.0 1 0 0 1 1 1 1 RmuC family APG6_N PF17675.1 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.01 16.3 1.1 0.011 16.2 1.1 1.0 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF3450 PF11932.8 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.013 14.8 3.2 0.013 14.8 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) KIAA1430 PF13879.6 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.014 16.1 3.1 0.017 15.8 3.1 1.1 1 0 0 1 1 1 0 KIAA1430 homologue TMF_TATA_bd PF12325.8 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.015 15.5 1.9 0.018 15.3 1.9 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Fib_alpha PF08702.10 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.021 15.0 4.4 0.024 14.8 4.4 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.022 14.0 2.0 0.025 13.8 2.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein DRY_EERY PF09750.9 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.024 14.9 2.9 0.027 14.8 2.9 1.2 1 0 0 1 1 1 0 Alternative splicing regulator DegS PF05384.11 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.028 13.9 4.1 0.031 13.7 4.1 1.0 1 0 0 1 1 1 0 Sensor protein DegS CENP-F_leu_zip PF10473.9 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.03 14.3 0.9 0.049 13.7 0.9 1.4 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YabA PF06156.13 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.032 14.9 1.5 0.036 14.7 1.5 1.1 1 0 0 1 1 1 0 Initiation control protein YabA PRKG1_interact PF15898.5 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.039 14.8 3.3 0.048 14.6 3.3 1.1 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain DivIC PF04977.15 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.052 13.3 3.8 0.062 13.1 3.8 1.2 1 0 0 1 1 1 0 Septum formation initiator TPR_MLP1_2 PF07926.12 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.071 13.2 5.1 0.19 11.8 3.5 1.8 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF724 PF05266.14 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.085 12.7 2.1 0.086 12.7 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF349 PF03993.12 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.11 12.8 2.4 0.46 10.8 0.2 2.1 1 1 1 2 2 2 0 Domain of Unknown Function (DUF349) DUF2570 PF10828.8 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.12 12.2 1.0 0.16 11.8 1.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) DUF2721 PF11026.8 NODE_78030_length_202_cov_2.245509_g70089_i0reverse_frame_1 - 0.35 10.7 0.8 0.5 10.3 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) PAP1 PF08601.10 NODE_78025_length_202_cov_2.293413_g70084_i0forward_frame_1 - 3.3 7.3 6.6 3.2 7.4 6.6 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 Glyco_hydro_108 PF05838.12 NODE_78020_length_202_cov_2.341317_g70079_i0reverse_frame_1 - 0.16 12.5 0.1 0.19 12.2 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase 108 Lamprin PF06403.11 NODE_78016_length_202_cov_2.532934_g70075_i0forward_frame_1 - 2.6 8.0 14.7 0.39 10.7 7.4 2.0 1 1 1 2 2 2 0 Lamprin Glycolipid_bind PF06475.11 NODE_78013_length_202_cov_2.592814_g70072_i0forward_frame_1 - 0.083 12.4 0.0 0.091 12.3 0.0 1.0 1 0 0 1 1 1 0 Putative glycolipid-binding CP2 PF04516.15 NODE_78011_length_202_cov_2.610778_g70070_i0reverse_frame_1 - 0.02 14.2 0.1 0.024 13.9 0.1 1.0 1 0 0 1 1 1 0 CP2 transcription factor Chorein_N PF12624.7 NODE_78001_length_202_cov_3.041916_g70060_i0forward_frame_1 - 0.17 12.0 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 N-terminal region of Chorein or VPS13 DUF5407 PF17401.2 NODE_77998_length_202_cov_3.113772_g70057_i0forward_frame_1 - 0.16 12.3 2.9 0.26 11.6 2.9 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5407) Lamprin PF06403.11 NODE_77997_length_202_cov_3.119760_g70056_i0reverse_frame_1 - 2.8 7.9 11.8 21 5.1 12.0 1.9 1 1 0 1 1 1 0 Lamprin Tape_meas_lam_C PF09718.10 NODE_77993_length_202_cov_3.245509_g70052_i0forward_frame_1 - 0.2 11.8 0.1 0.28 11.4 0.1 1.2 1 0 0 1 1 1 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) Glyco_trans_1_3 PF13528.6 NODE_77991_length_202_cov_3.287425_g70050_i0forward_frame_1 - 0.13 11.5 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Glycosyl transferase family 1 SecIII_SopE_N PF05364.14 NODE_77991_length_202_cov_3.287425_g70050_i0forward_frame_1 - 0.14 12.3 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus CCER1 PF15482.6 NODE_77985_length_202_cov_4.485030_g70044_i0forward_frame_1 - 0.12 12.2 5.2 0.12 12.3 5.2 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 RHIM PF12721.7 NODE_77984_length_202_cov_4.610778_g70043_i0forward_frame_1 - 0.022 15.2 0.0 0.028 14.9 0.0 1.2 1 0 0 1 1 1 0 RIP homotypic interaction motif DUF1924 PF09086.11 NODE_77975_length_202_cov_15.167665_g70034_i0reverse_frame_1 - 0.025 14.9 0.2 0.027 14.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1924) E7 PF00527.18 NODE_77975_length_202_cov_15.167665_g70034_i0reverse_frame_1 - 0.03 14.5 1.2 0.041 14.1 1.2 1.3 1 1 0 1 1 1 0 E7 protein, Early protein PHD PF00628.29 NODE_77973_length_202_cov_19.784431_g70032_i0reverse_frame_1 - 0.072 13.0 0.2 0.072 13.0 0.2 1.8 2 0 0 2 2 2 0 PHD-finger YhzD PF14120.6 NODE_77968_length_202_cov_25.832335_g70027_i0reverse_frame_1 - 0.0016 18.5 0.1 0.0021 18.1 0.1 1.2 1 0 0 1 1 1 1 YhzD-like protein WW_FCH_linker PF16623.5 NODE_77965_length_202_cov_29.634731_g70024_i0forward_frame_1 - 0.064 14.0 0.5 0.082 13.7 0.5 1.0 1 0 0 1 1 1 0 Unstructured linker region between on GAS7 protein YcaO PF02624.16 NODE_77963_length_202_cov_33.694611_g70022_i0forward_frame_1 - 0.13 11.5 0.0 0.13 11.5 0.0 1.0 1 0 0 1 1 1 0 YcaO cyclodehydratase, ATP-ad Mg2+-binding PPI_Ypi1 PF07491.11 NODE_77961_length_202_cov_34.592814_g70020_i0reverse_frame_1 - 0.39 10.6 3.2 0.63 9.9 2.5 1.7 1 1 1 2 2 2 0 Protein phosphatase inhibitor Tox-REase-3 PF15647.6 NODE_77954_length_202_cov_37.161677_g70013_i0reverse_frame_1 - 0.1 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 3 HEV_ORF1 PF02444.16 NODE_77952_length_202_cov_38.347305_g70011_i0forward_frame_1 - 4 8.0 11.0 0.27 11.8 6.5 1.5 2 0 0 2 2 2 0 Hepatitis E virus ORF-2 (Putative capsid protein) Equine_IAV_S2 PF06502.11 NODE_77951_length_202_cov_39.263473_g70010_i0forward_frame_1 - 0.11 12.5 1.0 2.1 8.5 0.3 2.0 1 1 1 2 2 2 0 Equine infectious anaemia virus S2 protein WWE PF02825.20 NODE_77945_length_202_cov_41.802395_g70004_i0forward_frame_1 - 0.0015 19.1 0.0 0.0017 18.9 0.0 1.1 1 0 0 1 1 1 1 WWE domain TMEM154 PF15102.6 NODE_77943_length_202_cov_45.916168_g70002_i0forward_frame_1 - 0.18 11.7 0.2 0.18 11.7 0.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family RHH_4 PF13467.6 NODE_77937_length_202_cov_49.694611_g69996_i0reverse_frame_1 - 0.082 12.8 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Ribbon-helix-helix domain IL12 PF03039.14 NODE_77930_length_202_cov_57.502994_g69989_i0forward_frame_1 - 0.049 13.0 0.4 0.052 12.9 0.4 1.0 1 0 0 1 1 1 0 Interleukin-12 alpha subunit Pallilysin PF18663.1 NODE_77928_length_202_cov_57.892216_g69987_i0reverse_frame_1 - 0.011 15.7 0.2 0.012 15.6 0.2 1.1 1 0 0 1 1 1 0 Pallilysin beta barrel domain G-7-MTase PF12803.7 NODE_77919_length_202_cov_91.592814_g69978_i0reverse_frame_1 - 0.025 13.8 0.1 0.035 13.3 0.1 1.2 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks396.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks396.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks396.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks396.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- IL8 PF00048.20 NODE_77912_length_202_cov_109.532934_g69971_i0forward_frame_1 - 0.16 12.1 0.0 0.5 10.6 0.0 1.7 2 0 0 2 2 2 0 Small cytokines (intecrine/chemokine), interleukin-8 like DUF4818 PF16089.5 NODE_77908_length_202_cov_131.844311_g69967_i0forward_frame_1 - 0.045 14.2 0.5 0.073 13.5 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4818) Nodulin_late PF07127.11 NODE_77907_length_202_cov_133.473054_g69966_i0forward_frame_1 - 1 9.8 4.9 2.3 8.6 4.9 1.6 1 1 0 1 1 1 0 Late nodulin protein zf-LITAF-like PF10601.9 NODE_77905_length_202_cov_136.389222_g69964_i0forward_frame_1 - 0.32 11.3 3.4 0.44 10.8 3.4 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain UPF0542 PF15086.6 NODE_77903_length_202_cov_142.706587_g69962_i0reverse_frame_1 - 2.1 8.4 6.1 3.7 7.5 6.1 1.6 1 1 0 1 1 1 0 Uncharacterised protein family UPF0542 RHS PF03527.14 NODE_77902_length_202_cov_167.886228_g69961_i0reverse_frame_1 - 0.12 12.2 0.0 0.17 11.7 0.0 1.4 1 1 0 1 1 1 0 RHS protein Imm6 PF14434.6 NODE_77897_length_202_cov_310.664671_g69956_i0reverse_frame_1 - 0.03 14.3 0.4 0.033 14.1 0.4 1.0 1 0 0 1 1 1 0 Immunity protein Imm6 Eclosion PF04736.12 NODE_77890_length_203_cov_0.892857_g69949_i0forward_frame_1 - 0.014 15.0 0.2 0.021 14.5 0.2 1.3 1 0 0 1 1 1 0 Eclosion hormone DUF4193 PF13834.6 NODE_77889_length_203_cov_0.892857_g69948_i0reverse_frame_1 - 0.092 13.3 0.3 0.28 11.7 0.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4193) Fer4_2 PF12797.7 NODE_77885_length_203_cov_0.922619_g69944_i0forward_frame_1 - 0.08 13.1 1.7 0.12 12.6 1.7 1.3 1 0 0 1 1 1 0 4Fe-4S binding domain Pertus-S4-tox PF09275.10 NODE_77876_length_203_cov_0.946429_g69935_i0forward_frame_1 - 0.09 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Pertussis toxin S4 subunit zf-C5HC2 PF02928.16 NODE_77871_length_203_cov_0.952381_g69930_i0forward_frame_1 - 0.0038 17.6 0.9 0.0043 17.4 0.9 1.1 1 0 0 1 1 1 1 C5HC2 zinc finger FYVE_2 PF02318.16 NODE_77871_length_203_cov_0.952381_g69930_i0forward_frame_1 - 0.12 12.6 1.0 0.13 12.5 1.0 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger DUF1648 PF07853.11 NODE_77870_length_203_cov_0.952381_g69929_i0reverse_frame_1 - 0.11 12.1 2.0 0.19 11.4 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1648) zf-CCCH_2 PF14608.6 NODE_77867_length_203_cov_0.952381_g69926_i0reverse_frame_1 - 0.085 13.4 3.8 0.27 11.8 3.8 1.9 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Glyco_hydro_38N PF01074.22 NODE_77866_length_203_cov_0.952381_g69925_i0reverse_frame_1 - 1.1e-16 61.0 0.8 1.2e-16 60.9 0.8 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Lipoprotein_Ltp PF07553.11 NODE_77866_length_203_cov_0.952381_g69925_i0reverse_frame_1 - 0.092 13.0 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Host cell surface-exposed lipoprotein Ribosomal_S14 PF00253.21 NODE_77853_length_203_cov_0.952381_g69912_i0forward_frame_1 - 0.018 14.8 0.5 0.02 14.6 0.5 1.3 1 1 0 1 1 1 0 Ribosomal protein S14p/S29e MIT PF04212.18 NODE_77852_length_203_cov_0.952381_g69911_i0forward_frame_1 - 0.041 14.0 0.0 0.059 13.4 0.0 1.2 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain TPR_2 PF07719.17 NODE_77852_length_203_cov_0.952381_g69911_i0forward_frame_1 - 0.078 13.1 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_77852_length_203_cov_0.952381_g69911_i0forward_frame_1 - 0.093 12.6 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Ribosomal_L37e PF01907.19 NODE_77846_length_203_cov_0.952381_g69905_i0reverse_frame_1 - 0.45 10.7 0.3 0.45 10.7 0.3 1.9 3 0 0 3 3 3 0 Ribosomal protein L37e TctA PF01970.16 NODE_77845_length_203_cov_0.952381_g69904_i0forward_frame_1 - 7.5 5.1 11.1 8 5.1 11.1 1.0 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family zf-RNPHF PF08080.12 NODE_77844_length_203_cov_0.952381_g69903_i0forward_frame_1 - 0.12 12.3 0.3 0.18 11.7 0.3 1.3 1 0 0 1 1 1 0 RNPHF zinc finger Methyltransf_15 PF09445.10 NODE_77841_length_203_cov_1.017857_g69900_i0forward_frame_1 - 0.022 14.3 0.3 0.025 14.2 0.3 1.1 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase ATP-synt_F6 PF05511.11 NODE_77836_length_203_cov_1.065476_g69895_i0forward_frame_1 - 0.0079 16.6 0.0 0.0088 16.4 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ATP synthase coupling factor 6 Fer4_19 PF06902.11 NODE_77836_length_203_cov_1.065476_g69895_i0forward_frame_1 - 0.063 13.4 0.0 0.077 13.1 0.0 1.1 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster S10_plectin PF03501.15 NODE_77815_length_203_cov_1.166667_g69874_i0forward_frame_1 - 0.012 15.6 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 Plectin/S10 domain IL3Ra_N PF18611.1 NODE_77812_length_203_cov_1.178571_g69871_i0forward_frame_1 - 0.046 13.7 0.5 0.054 13.5 0.1 1.4 2 0 0 2 2 2 0 IL-3 receptor alpha chain N-terminal domain DUF4294 PF14127.6 NODE_77809_length_203_cov_1.184524_g69868_i0reverse_frame_1 - 0.1 12.5 0.1 0.11 12.4 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4294) Pax7 PF12360.8 NODE_77808_length_203_cov_1.184524_g69867_i0forward_frame_1 - 0.077 13.2 0.4 0.1 12.8 0.4 1.3 1 0 0 1 1 1 0 Paired box protein 7 AgrB PF04647.15 NODE_77807_length_203_cov_1.184524_g69866_i0reverse_frame_1 - 0.14 11.4 1.0 0.17 11.2 1.0 1.1 1 0 0 1 1 1 0 Accessory gene regulator B MTHFR_C PF12225.8 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_1 - 0.056 13.1 0.9 0.072 12.7 0.3 1.4 2 0 0 2 2 2 0 Methylene-tetrahydrofolate reductase C terminal tRNA_bind PF01588.20 NODE_77789_length_203_cov_1.255952_g69848_i0reverse_frame_1 - 1e-06 28.8 0.1 1.5e-06 28.2 0.1 1.3 1 0 0 1 1 1 1 Putative tRNA binding domain LTXXQ PF07813.12 NODE_77785_length_203_cov_1.267857_g69844_i0reverse_frame_1 - 2.3e-06 28.3 1.3 2.6e-06 28.1 0.1 1.6 2 0 0 2 2 2 1 LTXXQ motif family protein SAM_1 PF00536.30 NODE_77781_length_203_cov_1.321429_g69840_i0reverse_frame_1 - 0.034 14.6 0.6 0.038 14.4 0.6 1.1 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Porin_10 PF14121.6 NODE_77775_length_203_cov_1.369048_g69834_i0reverse_frame_1 - 0.016 13.8 0.3 0.018 13.7 0.3 1.0 1 0 0 1 1 1 0 Putative porin LTP_2 PF14368.6 NODE_77770_length_203_cov_1.398810_g69829_i0reverse_frame_1 - 0.03 14.4 0.1 0.035 14.2 0.1 1.1 1 0 0 1 1 1 0 Probable lipid transfer COX4_pro PF03626.14 NODE_77769_length_203_cov_1.398810_g69828_i0reverse_frame_1 - 0.046 14.1 2.1 3.3 8.2 0.0 2.2 2 1 0 2 2 2 0 Prokaryotic Cytochrome C oxidase subunit IV Keratin_B2_2 PF13885.6 NODE_77767_length_203_cov_1.404762_g69826_i0forward_frame_1 - 0.054 13.5 10.5 0.11 12.4 10.0 1.9 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Tna_leader PF08053.11 NODE_77762_length_203_cov_1.422619_g69821_i0reverse_frame_1 - 1.6 8.9 6.5 12 6.0 0.6 2.4 2 0 0 2 2 2 0 Tryptophanase operon leader peptide Antistasin PF02822.14 NODE_77757_length_203_cov_1.422619_g69816_i0reverse_frame_1 - 0.04 14.6 1.7 0.04 14.6 1.7 2.8 2 1 0 2 2 2 0 Antistasin family Furin-like PF00757.20 NODE_77757_length_203_cov_1.422619_g69816_i0reverse_frame_1 - 0.07 13.0 14.8 0.084 12.7 14.8 1.2 1 0 0 1 1 1 0 Furin-like cysteine rich region VSP PF03302.13 NODE_77757_length_203_cov_1.422619_g69816_i0reverse_frame_1 - 0.44 9.4 24.5 3.8 6.3 24.5 1.9 1 1 0 1 1 1 0 Giardia variant-specific surface protein KASH PF10541.9 NODE_77753_length_203_cov_1.428571_g69812_i0reverse_frame_1 - 0.047 13.9 6.6 0.047 13.9 6.6 2.2 1 1 1 2 2 2 0 Nuclear envelope localisation domain SR-25 PF10500.9 NODE_77753_length_203_cov_1.428571_g69812_i0forward_frame_1 - 0.1 12.2 14.4 0.1 12.2 14.4 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RSN1_7TM PF02714.15 NODE_77751_length_203_cov_1.428571_g69810_i0forward_frame_1 - 0.0045 16.3 2.4 0.0045 16.3 2.4 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate VirB3 PF05101.13 NODE_77751_length_203_cov_1.428571_g69810_i0forward_frame_1 - 0.067 13.4 2.1 0.078 13.2 2.1 1.1 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein VPS9 PF02204.18 NODE_77750_length_203_cov_1.428571_g69809_i0reverse_frame_1 - 9e-07 29.1 0.3 9.5e-07 29.0 0.3 1.0 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain DUF3822 PF12864.7 NODE_77749_length_203_cov_1.428571_g69808_i0forward_frame_1 - 0.006 15.8 0.3 0.0068 15.6 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3822) Tet_JBP PF12851.7 NODE_77738_length_203_cov_1.434524_g69797_i0forward_frame_1 - 0.0067 15.8 0.0 0.0071 15.7 0.0 1.0 1 0 0 1 1 1 1 Oxygenase domain of the 2OGFeDO superfamily NADH_4Fe-4S PF10589.9 NODE_77729_length_203_cov_1.505952_g69788_i0reverse_frame_1 - 0.078 13.1 0.0 0.09 12.9 0.0 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLN3 PF02487.17 NODE_77729_length_203_cov_1.505952_g69788_i0forward_frame_1 - 1.1e-05 24.7 7.2 1.2e-05 24.6 7.2 1.0 1 0 0 1 1 1 1 CLN3 protein DUF4636 PF15468.6 NODE_77729_length_203_cov_1.505952_g69788_i0forward_frame_1 - 1.9 8.1 3.1 2.2 7.9 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) DUF4191 PF13829.6 NODE_77729_length_203_cov_1.505952_g69788_i0forward_frame_1 - 9.3 5.5 5.4 11 5.3 5.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) Pertactin PF03212.14 NODE_77726_length_203_cov_1.523810_g69785_i0reverse_frame_1 - 0.00041 20.3 0.6 0.00047 20.1 0.6 1.0 1 0 0 1 1 1 1 Pertactin Phage_Coat_A PF05357.13 NODE_77722_length_203_cov_1.541667_g69781_i0forward_frame_1 - 0.14 12.0 0.3 0.14 12.0 0.3 2.0 1 1 1 2 2 2 0 Phage Coat Protein A Sin3a_C PF16879.5 NODE_77721_length_203_cov_1.547619_g69780_i0reverse_frame_1 - 0.0069 16.1 0.2 0.0076 16.0 0.2 1.0 1 0 0 1 1 1 1 C-terminal domain of Sin3a protein SARS_lipid_bind PF09399.10 NODE_77719_length_203_cov_1.547619_g69778_i0reverse_frame_1 - 0.075 13.2 0.1 0.082 13.1 0.1 1.1 1 0 0 1 1 1 0 SARS lipid binding protein Pyridoxal_deC PF00282.19 NODE_77718_length_203_cov_1.553571_g69777_i0forward_frame_1 - 0.049 12.4 0.2 0.064 12.0 0.2 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain Peptidase_U57 PF05582.12 NODE_77712_length_203_cov_1.595238_g69771_i0forward_frame_1 - 0.067 12.4 0.2 0.067 12.4 0.2 1.1 1 0 0 1 1 1 0 YabG peptidase U57 Albumin_I PF08027.11 NODE_77710_length_203_cov_1.613095_g69769_i0reverse_frame_1 - 0.078 12.6 0.7 0.078 12.6 0.7 2.2 2 0 0 2 2 2 0 Albumin I chain b RCC1 PF00415.18 NODE_77709_length_203_cov_1.613095_g69768_i0reverse_frame_1 - 0.014 16.0 0.1 0.047 14.3 0.1 1.8 1 1 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat dUTPase_2 PF08761.11 NODE_77698_length_203_cov_1.666667_g69757_i0forward_frame_1 - 0.091 12.9 0.6 0.11 12.6 0.6 1.1 1 0 0 1 1 1 0 dUTPase DUF1447 PF07288.11 NODE_77696_length_203_cov_1.666667_g69755_i0forward_frame_1 - 0.062 13.4 0.1 0.08 13.0 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1447) Serinc PF03348.15 NODE_77696_length_203_cov_1.666667_g69755_i0forward_frame_1 - 0.12 11.2 0.2 0.14 11.1 0.2 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) DUF1463 PF07316.11 NODE_77693_length_203_cov_1.690476_g69752_i0reverse_frame_1 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1463) YHS PF04945.13 NODE_77693_length_203_cov_1.690476_g69752_i0forward_frame_1 - 0.018 15.2 0.1 0.035 14.2 0.1 1.5 1 0 0 1 1 1 0 YHS domain Glyco_hydro_43 PF04616.14 NODE_77693_length_203_cov_1.690476_g69752_i0forward_frame_1 - 0.061 12.6 0.0 0.068 12.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 43 PRP8_domainIV PF12134.8 NODE_77693_length_203_cov_1.690476_g69752_i0forward_frame_1 - 0.11 12.1 0.1 0.11 12.1 0.1 1.0 1 0 0 1 1 1 0 PRP8 domain IV core Prot_inhib_II PF02428.15 NODE_77687_length_203_cov_1.720238_g69746_i0reverse_frame_1 - 0.18 12.3 11.3 0.42 11.1 11.4 1.6 1 1 0 1 1 1 0 Potato type II proteinase inhibitor family Dynein_C PF18199.1 NODE_77687_length_203_cov_1.720238_g69746_i0forward_frame_1 - 0.1 11.8 0.0 0.11 11.6 0.0 1.0 1 0 0 1 1 1 0 Dynein heavy chain C-terminal domain DUF3833 PF12915.7 NODE_77686_length_203_cov_1.738095_g69745_i0reverse_frame_1 - 0.025 14.2 0.0 0.028 14.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3833) CENP-F_leu_zip PF10473.9 NODE_77654_length_203_cov_1.946429_g69713_i0reverse_frame_1 - 0.0012 18.8 0.8 0.0012 18.8 0.8 1.2 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3232 PF11554.8 NODE_77654_length_203_cov_1.946429_g69713_i0reverse_frame_1 - 0.042 14.2 3.1 0.046 14.1 3.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3232) ABC_tran PF00005.27 NODE_77653_length_203_cov_1.952381_g69712_i0forward_frame_1 - 4.8e-07 30.4 0.1 7.2e-07 29.8 0.1 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 NODE_77653_length_203_cov_1.952381_g69712_i0forward_frame_1 - 0.00029 20.8 0.0 0.00031 20.6 0.0 1.0 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Lipoprotein_9 PF03180.14 NODE_77652_length_203_cov_1.958333_g69711_i0forward_frame_1 - 0.047 12.8 0.0 0.052 12.6 0.0 1.0 1 0 0 1 1 1 0 NLPA lipoprotein DUF4801 PF16059.5 NODE_77650_length_203_cov_1.976190_g69709_i0reverse_frame_1 - 0.0071 16.3 0.1 0.01 15.7 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4801) V_ATPase_I PF01496.19 NODE_77648_length_203_cov_1.994048_g69707_i0reverse_frame_1 - 3.1e-06 25.5 0.0 3.1e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family a_DG1_N2 PF18424.1 NODE_77643_length_203_cov_2.041667_g69702_i0forward_frame_1 - 0.082 13.0 0.3 0.09 12.9 0.3 1.2 1 0 0 1 1 1 0 Alpha-Dystroglycan N-terminal domain 2 DUF4712 PF15830.5 NODE_77639_length_203_cov_2.065476_g69698_i0reverse_frame_1 - 0.14 11.8 0.1 0.15 11.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4712) Presenilin PF01080.17 NODE_77635_length_203_cov_2.101190_g69694_i0forward_frame_1 - 3.1 6.5 5.9 3.6 6.2 5.9 1.0 1 0 0 1 1 1 0 Presenilin Ank_4 PF13637.6 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 2.1e-07 31.4 0.5 3e-07 30.9 0.5 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 9.3e-07 29.4 0.1 1.2e-06 29.0 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 6.2e-06 26.4 1.1 0.011 16.0 0.3 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 6.7e-05 23.0 0.5 0.13 12.8 0.1 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 NODE_77632_length_203_cov_2.142857_g69691_i0forward_frame_1 - 0.003 17.9 0.3 1.2 9.8 0.1 2.1 2 0 0 2 2 2 2 Ankyrin repeat ALG3 PF05208.13 NODE_77622_length_203_cov_2.273810_g69681_i0reverse_frame_1 - 1.8e-11 44.1 1.1 2e-11 43.9 1.1 1.0 1 0 0 1 1 1 1 ALG3 protein Polysacc_syn_2C PF08485.10 NODE_77620_length_203_cov_2.315476_g69679_i0reverse_frame_1 - 0.02 14.6 0.1 0.027 14.2 0.1 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein C-terminal DUF3587 PF12132.8 NODE_77618_length_203_cov_2.351190_g69677_i0reverse_frame_1 - 3.5 7.0 10.8 4.5 6.7 10.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3587) AZUL PF16558.5 NODE_77594_length_203_cov_2.648810_g69653_i0reverse_frame_1 - 0.049 13.9 0.2 0.067 13.4 0.2 1.2 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A DUF302 PF03625.14 NODE_77591_length_203_cov_2.773810_g69650_i0reverse_frame_1 - 0.11 12.4 0.5 0.57 10.1 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function DUF302 zf-CRD PF17979.1 NODE_77574_length_203_cov_3.327381_g69633_i0reverse_frame_1 - 0.64 10.1 6.4 1.1 9.3 6.4 1.5 1 1 0 1 1 1 0 Cysteine rich domain with multizinc binding regions DUF1378 PF07125.11 NODE_77573_length_203_cov_3.339286_g69632_i0forward_frame_1 - 0.13 12.5 2.6 0.19 11.9 2.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) Peptidase_C50 PF03568.17 NODE_77570_length_203_cov_3.577381_g69629_i0forward_frame_1 - 0.048 12.8 0.2 0.048 12.8 0.2 1.1 1 0 0 1 1 1 0 Peptidase family C50 Zds_C PF08632.10 NODE_77568_length_203_cov_3.630952_g69627_i0forward_frame_1 - 0.073 12.8 2.1 0.29 10.9 0.9 2.2 2 1 0 2 2 2 0 Activator of mitotic machinery Cdc14 phosphatase activation C-term Toxin_TOLIP PF00087.21 NODE_77557_length_203_cov_22.035714_g69616_i0reverse_frame_1 - 0.024 14.9 0.8 0.031 14.5 0.8 1.2 1 0 0 1 1 1 0 Snake toxin and toxin-like protein PRA1 PF03208.19 NODE_77555_length_203_cov_22.839286_g69614_i0forward_frame_1 - 0.25 11.0 3.2 0.27 10.8 3.2 1.1 1 0 0 1 1 1 0 PRA1 family protein RXT2_N PF08595.11 NODE_77552_length_203_cov_26.589286_g69611_i0reverse_frame_1 - 0.073 13.1 5.2 0.085 12.9 5.2 1.0 1 0 0 1 1 1 0 RXT2-like, N-terminal DUF4400 PF14348.6 NODE_77543_length_203_cov_34.970238_g69602_i0forward_frame_1 - 0.12 11.9 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) SOCS_box PF07525.16 NODE_77542_length_203_cov_35.083333_g69601_i0forward_frame_1 - 0.072 13.5 1.6 0.11 12.9 1.6 1.2 1 0 0 1 1 1 0 SOCS box DnaI_N PF07319.11 NODE_77535_length_203_cov_37.916667_g69594_i0reverse_frame_1 - 0.12 13.1 6.5 0.14 12.8 6.5 1.2 1 0 0 1 1 1 0 Primosomal protein DnaI N-terminus DUF5357 PF17310.2 NODE_77535_length_203_cov_37.916667_g69594_i0reverse_frame_1 - 2.2 6.8 5.5 2.3 6.7 5.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) HRG PF16954.5 NODE_77535_length_203_cov_37.916667_g69594_i0forward_frame_1 - 0.27 11.7 9.2 0.11 12.9 6.9 1.7 1 1 0 1 1 1 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene p12I PF12233.8 NODE_77526_length_203_cov_45.666667_g69585_i0forward_frame_1 - 0.045 14.2 5.7 0.049 14.1 5.7 1.1 1 0 0 1 1 1 0 Human adult T cell leukemia/lymphoma virus protein Microcin PF03526.13 NODE_77523_length_203_cov_51.130952_g69582_i0forward_frame_1 - 0.16 11.8 0.6 0.16 11.8 0.6 1.6 2 0 0 2 2 2 0 Colicin E1 (microcin) immunity protein SH3_10 PF17902.1 NODE_77518_length_203_cov_60.000000_g69577_i0reverse_frame_1 - 0.11 12.5 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 SH3 domain ATP-synt_8 PF00895.20 NODE_77517_length_203_cov_60.702381_g69576_i0reverse_frame_1 - 0.044 14.2 0.3 0.068 13.6 0.3 1.3 1 0 0 1 1 1 0 ATP synthase protein 8 DUF3964 PF13107.6 NODE_77516_length_203_cov_61.541667_g69575_i0forward_frame_1 - 0.033 14.6 0.1 0.035 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3964) ToxN_toxin PF13958.6 NODE_77514_length_203_cov_65.738095_g69573_i0reverse_frame_1 - 0.046 14.0 0.7 0.055 13.7 0.7 1.1 1 0 0 1 1 1 0 Toxin ToxN, type III toxin-antitoxin system DUF4995 PF16386.5 NODE_77513_length_203_cov_68.589286_g69572_i0forward_frame_1 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function AMMECR1 PF01871.17 NODE_77508_length_203_cov_82.428571_g69567_i0reverse_frame_1 - 0.0029 17.3 0.0 0.0041 16.7 0.0 1.3 1 0 0 1 1 1 1 AMMECR1 DUF3708 PF12501.8 NODE_77504_length_203_cov_95.654762_g69563_i0forward_frame_1 - 0.18 11.6 0.0 0.21 11.4 0.0 1.0 1 0 0 1 1 1 0 Phosphate ATP-binding cassette transporter Tox-PL-2 PF15643.6 NODE_77496_length_203_cov_133.178571_g69555_i0reverse_frame_1 - 0.21 11.7 0.8 0.25 11.5 0.8 1.2 1 0 0 1 1 1 0 Papain fold toxin 2 Prolamin_like PF05617.11 NODE_77494_length_203_cov_184.630952_g69553_i0forward_frame_1 - 0.022 14.9 0.1 0.025 14.7 0.1 1.2 1 0 0 1 1 1 0 Prolamin-like YajC PF02699.15 NODE_77492_length_203_cov_211.880952_g69551_i0forward_frame_1 - 0.019 14.8 0.7 0.028 14.3 0.7 1.3 1 0 0 1 1 1 0 Preprotein translocase subunit AAA_12 PF13087.6 NODE_77492_length_203_cov_211.880952_g69551_i0forward_frame_1 - 0.034 13.7 0.5 0.041 13.5 0.5 1.0 1 0 0 1 1 1 0 AAA domain DUF5436 PF17504.2 NODE_77492_length_203_cov_211.880952_g69551_i0forward_frame_1 - 0.5 10.7 2.6 0.69 10.3 2.4 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5436) Tnp_DNA_bind PF14706.6 NODE_77491_length_203_cov_219.613095_g69550_i0forward_frame_1 - 0.031 14.1 0.1 0.049 13.5 0.0 1.4 2 0 0 2 2 2 0 Transposase DNA-binding PEGSRP PF07623.11 NODE_77488_length_203_cov_298.827381_g69547_i0forward_frame_1 - 0.027 14.2 3.5 0.3 10.9 1.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DUF2633 PF11119.8 NODE_77487_length_203_cov_484.678571_g69546_i0forward_frame_1 - 0.063 13.2 0.0 0.099 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Toxin_23 PF08093.11 NODE_77484_length_204_cov_0.857988_g69543_i0forward_frame_1 - 0.081 13.1 0.5 0.081 13.1 0.5 1.7 2 0 0 2 2 2 0 Magi 5 toxic peptide family PRIMA1 PF16101.5 NODE_77483_length_204_cov_0.905325_g69542_i0forward_frame_1 - 0.39 10.8 3.5 0.49 10.4 3.5 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 LTP_2 PF14368.6 NODE_77482_length_204_cov_0.917160_g69541_i0forward_frame_1 - 0.014 15.5 0.2 0.015 15.4 0.2 1.1 1 0 0 1 1 1 0 Probable lipid transfer Cpta_toxin PF07254.12 NODE_77482_length_204_cov_0.917160_g69541_i0forward_frame_1 - 0.11 12.5 1.1 0.13 12.2 1.1 1.1 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system AChE_tetra PF08674.10 NODE_77481_length_204_cov_0.917160_g69540_i0forward_frame_1 - 0.24 11.1 0.3 0.24 11.1 0.3 1.5 2 0 0 2 2 2 0 Acetylcholinesterase tetramerisation domain GPR_Gpa2_C PF11970.8 NODE_77479_length_204_cov_0.934911_g69538_i0reverse_frame_1 - 0.047 13.8 0.1 0.061 13.4 0.1 1.3 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term Rtt106_N PF18215.1 NODE_77479_length_204_cov_0.934911_g69538_i0forward_frame_1 - 0.15 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain DinB_2 PF12867.7 NODE_77475_length_204_cov_0.940828_g69534_i0forward_frame_1 - 0.11 13.0 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 DinB superfamily Lipase_2 PF01674.18 NODE_77472_length_204_cov_0.940828_g69531_i0forward_frame_1 - 0.24 10.9 1.7 0.24 10.9 1.7 1.1 1 0 0 1 1 1 0 Lipase (class 2) NHase_alpha PF02979.16 NODE_77470_length_204_cov_0.946746_g69529_i0reverse_frame_1 - 0.36 10.1 1.4 0.41 9.9 1.4 1.1 1 0 0 1 1 1 0 Nitrile hydratase, alpha chain RELT PF12606.8 NODE_77464_length_204_cov_0.946746_g69523_i0forward_frame_1 - 0.18 10.8 0.3 0.87 8.6 0.0 1.9 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 Sigma_1_2 PF03084.14 NODE_77461_length_204_cov_0.946746_g69520_i0reverse_frame_1 - 0.085 12.1 0.1 0.085 12.1 0.1 1.0 1 0 0 1 1 1 0 Reoviral Sigma1/Sigma2 family zf-C3HC PF07967.13 NODE_77461_length_204_cov_0.946746_g69520_i0forward_frame_1 - 0.079 13.0 0.8 0.087 12.9 0.8 1.0 1 0 0 1 1 1 0 C3HC zinc finger-like IL3Ra_N PF18611.1 NODE_77451_length_204_cov_0.946746_g69510_i0reverse_frame_1 - 0.19 11.7 4.3 0.18 11.8 2.3 1.8 1 1 1 2 2 2 0 IL-3 receptor alpha chain N-terminal domain ArfGap PF01412.18 NODE_77451_length_204_cov_0.946746_g69510_i0forward_frame_1 - 0.36 10.9 3.4 0.49 10.5 3.4 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf DAO_C PF16901.5 NODE_77438_length_204_cov_1.035503_g69497_i0reverse_frame_1 - 0.00043 20.2 0.0 0.0005 19.9 0.0 1.0 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase GXWXG PF14231.6 NODE_77437_length_204_cov_1.047337_g69496_i0reverse_frame_1 - 0.11 12.6 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 GXWXG protein NID PF07292.13 NODE_77435_length_204_cov_1.059172_g69494_i0forward_frame_1 - 0.02 15.5 0.1 0.024 15.3 0.1 1.1 1 0 0 1 1 1 0 Nmi/IFP 35 domain (NID) DUF4705 PF15788.5 NODE_77434_length_204_cov_1.065089_g69493_i0forward_frame_1 - 0.061 13.6 5.1 0.12 12.7 2.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4705) LAGLIDADG_1 PF00961.19 NODE_77429_length_204_cov_1.124260_g69488_i0forward_frame_1 - 0.00017 22.5 0.8 0.0002 22.3 0.8 1.0 1 0 0 1 1 1 1 LAGLIDADG endonuclease DUF5492 PF17596.2 NODE_77429_length_204_cov_1.124260_g69488_i0forward_frame_1 - 0.027 14.8 0.4 0.14 12.5 0.1 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5492) Poxvirus_B22R PF04395.12 NODE_77429_length_204_cov_1.124260_g69488_i0forward_frame_1 - 0.089 12.3 0.1 0.094 12.2 0.1 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein DUF572 PF04502.13 NODE_77428_length_204_cov_1.124260_g69487_i0reverse_frame_1 - 0.032 13.9 1.4 0.038 13.6 1.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF572) Bap31_Bap29_C PF18035.1 NODE_77427_length_204_cov_1.142012_g69486_i0forward_frame_1 - 0.35 10.9 4.2 0.11 12.5 1.4 1.6 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain FLYWCH_N PF15423.6 NODE_77422_length_204_cov_1.177515_g69481_i0forward_frame_1 - 0.01 16.0 0.2 0.016 15.3 0.2 1.4 1 1 0 1 1 1 0 FLYWCH-type zinc finger-containing protein SecIII_SopE_N PF05364.14 NODE_77409_length_204_cov_1.230769_g69468_i0reverse_frame_1 - 0.12 12.5 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus DUF4406 PF14359.6 NODE_77408_length_204_cov_1.230769_g69467_i0reverse_frame_1 - 0.049 14.1 0.0 0.057 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4406) YscK PF06578.12 NODE_77408_length_204_cov_1.230769_g69467_i0forward_frame_1 - 0.082 12.4 0.0 0.086 12.3 0.0 1.0 1 0 0 1 1 1 0 YOP proteins translocation protein K (YscK) HTH_6 PF01418.17 NODE_77398_length_204_cov_1.284024_g69457_i0forward_frame_1 - 0.086 12.8 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family zf-RING-like PF08746.11 NODE_77396_length_204_cov_1.289941_g69455_i0reverse_frame_1 - 0.062 13.6 2.3 0.1 12.9 2.3 1.4 1 0 0 1 1 1 0 RING-like domain UVR PF02151.19 NODE_77393_length_204_cov_1.301775_g69452_i0reverse_frame_1 - 0.00079 19.1 6.5 0.00079 19.1 6.5 2.0 2 0 0 2 2 2 1 UvrB/uvrC motif FRG1 PF06229.12 NODE_77393_length_204_cov_1.301775_g69452_i0reverse_frame_1 - 0.11 12.2 2.5 0.1 12.3 2.5 1.1 1 0 0 1 1 1 0 FRG1-like domain Ntox1 PF15500.6 NODE_77393_length_204_cov_1.301775_g69452_i0reverse_frame_1 - 0.13 12.6 1.2 0.15 12.4 1.2 1.1 1 0 0 1 1 1 0 Putative RNase-like toxin, toxin_1 UCR_Fe-S_N PF10399.9 NODE_77382_length_204_cov_1.396450_g69441_i0reverse_frame_1 - 0.16 11.3 0.1 0.28 10.6 0.1 1.3 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IPTL-CTERM PF18203.1 NODE_77381_length_204_cov_1.396450_g69440_i0reverse_frame_1 - 0.085 12.8 1.6 0.085 12.8 1.6 1.5 2 0 0 2 2 2 0 IPTL-CTERM motif Presenilin PF01080.17 NODE_77363_length_204_cov_1.449704_g69422_i0forward_frame_1 - 0.0094 14.8 1.7 0.0092 14.8 1.7 1.0 1 0 0 1 1 1 1 Presenilin zf-BED PF02892.15 NODE_77361_length_204_cov_1.479290_g69420_i0forward_frame_1 - 0.18 11.9 4.5 0.25 11.4 4.5 1.5 1 1 0 1 1 1 0 BED zinc finger Carot_N PF09150.10 NODE_77349_length_204_cov_1.544379_g69408_i0reverse_frame_1 - 0.038 13.9 0.2 0.044 13.7 0.1 1.2 1 1 0 1 1 1 0 Orange carotenoid protein, N-terminal DEAD PF00270.29 NODE_77336_length_204_cov_1.597633_g69395_i0reverse_frame_1 - 4.6e-11 42.8 0.0 5.6e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase PhoH PF02562.16 NODE_77336_length_204_cov_1.597633_g69395_i0reverse_frame_1 - 0.01 15.3 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 0 PhoH-like protein ResIII PF04851.15 NODE_77336_length_204_cov_1.597633_g69395_i0reverse_frame_1 - 0.027 14.5 0.0 0.028 14.4 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Neisseria_PilC PF05567.11 NODE_77335_length_204_cov_1.609467_g69394_i0forward_frame_1 - 0.0039 16.2 0.0 0.0039 16.2 0.0 1.0 1 0 0 1 1 1 1 Neisseria PilC beta-propeller domain Gallidermin PF02052.15 NODE_77333_length_204_cov_1.627219_g69392_i0reverse_frame_1 - 0.081 13.3 0.4 0.14 12.5 0.4 1.3 1 0 0 1 1 1 0 Gallidermin tRNA_lig_kinase PF08303.11 NODE_77332_length_204_cov_1.633136_g69391_i0reverse_frame_1 - 0.07 13.2 1.6 0.082 13.0 1.6 1.1 1 0 0 1 1 1 0 tRNA ligase kinase domain PPR PF01535.20 NODE_77331_length_204_cov_1.639053_g69390_i0reverse_frame_1 - 4.8e-05 23.3 0.2 0.11 12.8 0.0 2.2 2 0 0 2 2 2 2 PPR repeat PPR_2 PF13041.6 NODE_77331_length_204_cov_1.639053_g69390_i0reverse_frame_1 - 0.00061 19.9 0.1 0.81 9.9 0.0 2.1 2 0 0 2 2 2 2 PPR repeat family PPR_1 PF12854.7 NODE_77331_length_204_cov_1.639053_g69390_i0reverse_frame_1 - 0.11 12.3 0.1 4.8 7.0 0.1 2.1 2 0 0 2 2 2 0 PPR repeat PYRIN PF02758.16 NODE_77331_length_204_cov_1.639053_g69390_i0reverse_frame_1 - 0.12 12.5 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 PAAD/DAPIN/Pyrin domain RNA_POL_M_15KD PF02150.16 NODE_77326_length_204_cov_1.650888_g69385_i0reverse_frame_1 - 0.017 15.0 0.0 0.046 13.6 0.0 1.8 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit CxC3 PF18804.1 NODE_77326_length_204_cov_1.650888_g69385_i0reverse_frame_1 - 0.017 15.0 0.3 0.021 14.7 0.1 1.3 1 1 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases Stomagen PF16851.5 NODE_77326_length_204_cov_1.650888_g69385_i0reverse_frame_1 - 0.031 14.3 0.7 0.031 14.3 0.7 2.2 1 1 1 2 2 2 0 Stomagen FYVE_2 PF02318.16 NODE_77326_length_204_cov_1.650888_g69385_i0reverse_frame_1 - 0.27 11.4 5.2 0.2 11.9 3.9 1.4 1 1 0 1 1 1 0 FYVE-type zinc finger CA_like PF10563.9 NODE_77320_length_204_cov_1.727811_g69379_i0reverse_frame_1 - 0.05 13.5 0.0 0.05 13.5 0.0 1.1 1 0 0 1 1 1 0 Putative carbonic anhydrase Herpes_UL21 PF03252.13 NODE_77314_length_204_cov_1.775148_g69373_i0reverse_frame_1 - 0.31 9.7 1.4 0.34 9.6 1.4 1.0 1 0 0 1 1 1 0 Herpesvirus UL21 ATG7_N PF16420.5 NODE_77314_length_204_cov_1.775148_g69373_i0forward_frame_1 - 0.098 12.3 0.2 0.11 12.1 0.2 1.0 1 0 0 1 1 1 0 Ubiquitin-like modifier-activating enzyme ATG7 N-terminus DUF1031 PF06275.11 NODE_77309_length_204_cov_1.857988_g69368_i0forward_frame_1 - 0.06 13.6 0.3 0.25 11.6 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1031) AIMP2_LysRS_bd PF16780.5 NODE_77305_length_204_cov_1.869822_g69364_i0reverse_frame_1 - 0.14 11.9 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 AIMP2 lysyl-tRNA synthetase binding domain TAD2 PF18521.1 NODE_77303_length_204_cov_1.887574_g69362_i0forward_frame_1 - 0.091 12.8 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Transactivation domain 2 Glu_cyclase_2 PF05096.12 NODE_77301_length_204_cov_1.893491_g69360_i0forward_frame_1 - 6.4e-07 29.1 0.3 6.4e-07 29.1 0.3 1.2 1 0 0 1 1 1 1 Glutamine cyclotransferase DUF3272 PF11676.8 NODE_77301_length_204_cov_1.893491_g69360_i0forward_frame_1 - 0.014 15.6 0.2 0.022 15.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3272) DUF2325 PF10087.9 NODE_77283_length_204_cov_2.011834_g69342_i0forward_frame_1 - 0.081 13.1 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2325) NdhL PF10716.9 NODE_77282_length_204_cov_2.023669_g69341_i0forward_frame_1 - 0.024 14.6 2.4 0.025 14.5 2.4 1.1 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit baeRF_family7 PF18849.1 NODE_77273_length_204_cov_2.071006_g69332_i0forward_frame_1 - 0.034 14.3 0.0 0.039 14.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 7 DDE_1 PF03184.19 NODE_77265_length_204_cov_2.112426_g69324_i0reverse_frame_1 - 0.00011 21.9 0.0 0.00013 21.7 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease rve PF00665.26 NODE_77260_length_204_cov_2.142012_g69319_i0reverse_frame_1 - 0.031 14.5 0.0 0.036 14.3 0.0 1.0 1 0 0 1 1 1 0 Integrase core domain Peptidase_S9 PF00326.21 NODE_77260_length_204_cov_2.142012_g69319_i0reverse_frame_1 - 0.033 13.6 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 Prolyl oligopeptidase family AAA_25 PF13481.6 NODE_77260_length_204_cov_2.142012_g69319_i0reverse_frame_1 - 0.12 11.9 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain Nup35_RRM PF05172.13 NODE_77259_length_204_cov_2.147929_g69318_i0forward_frame_1 - 0.059 13.3 0.0 0.059 13.3 0.0 1.1 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif ApoB100_C PF12491.8 NODE_77256_length_204_cov_2.165680_g69315_i0reverse_frame_1 - 0.032 14.2 0.0 0.048 13.6 0.0 1.2 1 0 0 1 1 1 0 Apolipoprotein B100 C terminal DUF3413 PF11893.8 NODE_77249_length_204_cov_2.242604_g69308_i0reverse_frame_1 - 0.064 12.4 3.8 0.071 12.3 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) DUF5421 PF17458.2 NODE_77249_length_204_cov_2.242604_g69308_i0forward_frame_1 - 0.062 12.7 0.2 0.072 12.5 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5421) RcpB PF16971.5 NODE_77247_length_204_cov_2.248521_g69306_i0reverse_frame_1 - 0.2 11.5 0.0 0.44 10.4 0.0 1.4 1 1 0 1 1 1 0 Rough colony protein B, tight adherence - tad - subunit RVT_3 PF13456.6 NODE_77235_length_204_cov_2.426036_g69294_i0reverse_frame_1 - 0.026 14.3 0.0 0.027 14.3 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase-like KCT2 PF17818.1 NODE_77233_length_204_cov_2.497041_g69292_i0reverse_frame_1 - 0.77 9.9 2.5 0.99 9.5 2.5 1.1 1 0 0 1 1 1 0 Keratinocyte-associated gene product YchF-GTPase_C PF06071.13 NODE_77233_length_204_cov_2.497041_g69292_i0forward_frame_1 - 7.4e-25 87.0 0.6 8.2e-25 86.8 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF933) NADH_B2 PF14813.6 NODE_77223_length_204_cov_2.668639_g69282_i0reverse_frame_1 - 0.053 13.3 0.4 0.07 12.9 0.4 1.2 1 0 0 1 1 1 0 NADH dehydrogenase 1 beta subcomplex subunit 2 OrfA PF17495.2 NODE_77222_length_204_cov_2.674556_g69281_i0reverse_frame_1 - 0.11 12.6 0.2 0.13 12.4 0.2 1.1 1 0 0 1 1 1 0 Vpr-like OrfA Osmo_CC PF08946.10 NODE_77222_length_204_cov_2.674556_g69281_i0reverse_frame_1 - 0.17 12.2 0.5 0.23 11.7 0.5 1.3 1 0 0 1 1 1 0 Osmosensory transporter coiled coil YojJ PF10372.9 NODE_77222_length_204_cov_2.674556_g69281_i0forward_frame_1 - 0.058 13.5 0.7 0.073 13.2 0.1 1.5 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus YbjN PF10722.9 NODE_77221_length_204_cov_2.692308_g69280_i0forward_frame_1 - 0.012 15.7 0.0 0.013 15.6 0.0 1.1 1 0 0 1 1 1 0 Putative bacterial sensory transduction regulator HTH_1 PF00126.27 NODE_77214_length_204_cov_2.840237_g69273_i0forward_frame_1 - 0.0012 18.8 0.1 0.002 18.0 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family TMEM132D_C PF15706.5 NODE_77212_length_204_cov_2.887574_g69271_i0reverse_frame_1 - 0.17 11.6 2.2 0.22 11.3 2.2 1.3 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Orai-1 PF07856.12 NODE_77212_length_204_cov_2.887574_g69271_i0reverse_frame_1 - 0.63 9.7 6.3 0.71 9.5 6.3 1.2 1 0 0 1 1 1 0 Mediator of CRAC channel activity BacteriocIIc_cy PF12173.8 NODE_77211_length_204_cov_2.893491_g69270_i0reverse_frame_1 - 0.17 12.1 0.9 0.74 10.1 0.0 2.0 2 0 0 2 2 2 0 Bacteriocin class IIc cyclic gassericin A-like zf_C2H2_6 PF18450.1 NODE_77209_length_204_cov_2.899408_g69268_i0forward_frame_1 - 0.73 9.6 4.4 2.9 7.7 1.6 2.3 2 0 0 2 2 2 0 Zinc Finger domain Rrn6 PF10214.9 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_1 - 5 5.5 17.8 5.6 5.3 17.8 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor CxC2 PF18803.1 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_1 - 0.075 13.2 2.1 0.079 13.1 2.1 1.1 1 0 0 1 1 1 0 CxC2 like cysteine cluster associated with KDZ transposases Mucin PF01456.17 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_1 - 3.8 7.5 25.4 4.7 7.2 25.4 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DDE_Tnp_1 PF01609.21 NODE_77205_length_204_cov_3.094675_g69264_i0reverse_frame_1 - 0.0014 18.3 0.1 0.0016 18.2 0.1 1.1 1 0 0 1 1 1 1 Transposase DDE domain UPF0147 PF03685.13 NODE_77202_length_204_cov_3.171598_g69261_i0reverse_frame_1 - 0.069 13.2 0.0 0.077 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0147) Ank_4 PF13637.6 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 2.5e-10 40.7 0.1 1.3e-08 35.2 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 4.7e-07 30.3 0.2 5.6e-07 30.1 0.2 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 2.3e-06 27.5 0.0 0.0095 16.4 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 2.2e-05 24.6 0.0 0.0012 19.1 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 0.0012 19.3 0.2 0.004 17.5 0.0 1.9 2 1 0 2 2 2 1 Ankyrin repeat DUF3368 PF11848.8 NODE_77201_length_204_cov_3.355030_g69260_i0reverse_frame_1 - 0.15 11.8 0.0 0.58 10.0 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3368) Toxin_32 PF08120.11 NODE_77183_length_204_cov_31.023669_g69242_i0reverse_frame_1 - 0.89 9.4 3.5 13 5.7 0.7 2.1 2 0 0 2 2 2 0 Tamulustoxin family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks397.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks397.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks397.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks397.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:35:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ACBP PF00887.19 NODE_77179_length_204_cov_35.426036_g69238_i0reverse_frame_1 - 0.0039 17.4 0.2 0.0039 17.4 0.2 1.5 2 0 0 2 2 2 1 Acyl CoA binding protein Corona_NS3b PF03053.14 NODE_77178_length_204_cov_37.426036_g69237_i0forward_frame_1 - 0.69 9.6 8.4 0.68 9.6 8.4 1.0 1 0 0 1 1 1 0 ORF3b coronavirus protein Arteri_Gl PF00951.18 NODE_77174_length_204_cov_40.692308_g69233_i0reverse_frame_1 - 0.0094 15.8 0.8 0.0099 15.7 0.8 1.1 1 0 0 1 1 1 1 Arterivirus GL envelope glycoprotein Adeno_E3B PF03376.14 NODE_77170_length_204_cov_43.059172_g69229_i0reverse_frame_1 - 0.0035 17.5 0.4 0.0041 17.3 0.4 1.1 1 0 0 1 1 1 1 Adenovirus E3B protein GlyL_C PF12524.8 NODE_77169_length_204_cov_43.260355_g69228_i0reverse_frame_1 - 0.0067 16.5 0.2 0.013 15.6 0.2 1.5 1 0 0 1 1 1 1 dsDNA virus glycoprotein L C terminal NUC130_3NT PF08158.12 NODE_77166_length_204_cov_46.686391_g69225_i0forward_frame_1 - 0.13 12.6 0.1 0.16 12.3 0.1 1.1 1 0 0 1 1 1 0 NUC130/3NT domain Sua5_yciO_yrdC PF01300.18 NODE_77157_length_204_cov_53.982249_g69216_i0forward_frame_1 - 0.063 12.8 0.0 0.07 12.6 0.0 1.1 1 0 0 1 1 1 0 Telomere recombination DUF4533 PF15047.6 NODE_77156_length_204_cov_56.284024_g69215_i0reverse_frame_1 - 0.12 11.9 0.2 0.13 11.8 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4533) Nterm_IS4 PF13006.7 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_1 - 0.029 14.6 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Insertion element 4 transposase N-terminal Fanconi_A PF03511.14 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_1 - 0.037 13.9 0.0 0.042 13.8 0.0 1.1 1 0 0 1 1 1 0 Fanconi anaemia group A protein IPK PF03770.16 NODE_77151_length_204_cov_62.846154_g69210_i0forward_frame_1 - 0.019 14.9 0.0 0.023 14.5 0.0 1.1 1 0 0 1 1 1 0 Inositol polyphosphate kinase DUF1131 PF06572.12 NODE_77150_length_204_cov_63.550296_g69209_i0forward_frame_1 - 0.012 15.3 0.0 0.013 15.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1131) PigN PF04987.14 NODE_77146_length_204_cov_68.792899_g69205_i0reverse_frame_1 - 0.013 14.4 0.1 0.013 14.4 0.1 1.0 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) ABC2_membrane_3 PF12698.7 NODE_77146_length_204_cov_68.792899_g69205_i0reverse_frame_1 - 0.14 11.2 0.0 0.18 10.9 0.0 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein TPPK_C PF12555.8 NODE_77143_length_204_cov_71.088757_g69202_i0forward_frame_1 - 0.073 13.1 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Thiamine pyrophosphokinase C terminal IQ PF00612.27 NODE_77142_length_204_cov_72.698225_g69201_i0forward_frame_1 - 0.034 13.9 0.5 0.059 13.2 0.5 1.4 1 0 0 1 1 1 0 IQ calmodulin-binding motif Benyvirus_14KDa PF07255.11 NODE_77135_length_204_cov_86.970414_g69194_i0reverse_frame_1 - 7.8 6.7 9.8 2.7 8.2 4.6 2.1 1 1 1 2 2 2 0 Benyvirus 14KDa protein Lipocalin_8 PF16585.5 NODE_77131_length_204_cov_100.668639_g69190_i0reverse_frame_1 - 0.01 16.3 0.4 0.012 16.1 0.4 1.1 1 0 0 1 1 1 0 Lipocalin-like domain Pilus_CpaD PF09476.10 NODE_77126_length_204_cov_140.130178_g69185_i0reverse_frame_1 - 0.081 12.6 1.1 0.086 12.6 1.1 1.1 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) DUF1749 PF08538.10 NODE_77126_length_204_cov_140.130178_g69185_i0reverse_frame_1 - 0.082 12.0 0.0 0.091 11.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1749) FAM199X PF15814.5 NODE_77124_length_204_cov_156.189349_g69183_i0forward_frame_1 - 2.9 6.9 7.2 3 6.8 7.2 1.0 1 0 0 1 1 1 0 Protein family FAM199X X PF00739.19 NODE_77122_length_204_cov_176.331361_g69181_i0reverse_frame_1 - 0.062 13.4 0.1 0.073 13.2 0.1 1.1 1 0 0 1 1 1 0 Trans-activation protein X DUF3716 PF12511.8 NODE_77118_length_204_cov_286.573964_g69177_i0forward_frame_1 - 0.032 14.3 0.1 0.038 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3716) Lamprin PF06403.11 NODE_77106_length_205_cov_0.911765_g69165_i0reverse_frame_3 - 2.5 8.1 6.4 5 7.1 6.4 1.5 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_77106_length_205_cov_0.911765_g69165_i0reverse_frame_2 - 0.034 14.1 0.8 0.037 14.0 0.8 1.1 1 0 0 1 1 1 0 Lamprin Chorion_1 PF01723.16 NODE_77106_length_205_cov_0.911765_g69165_i0reverse_frame_2 - 0.091 12.7 1.4 0.099 12.6 1.4 1.0 1 0 0 1 1 1 0 Chorion protein DUF4326 PF14216.6 NODE_77106_length_205_cov_0.911765_g69165_i0forward_frame_2 - 0.12 13.2 1.3 0.17 12.7 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4326) SLBP_RNA_bind PF15247.6 NODE_77101_length_205_cov_0.935294_g69160_i0reverse_frame_3 - 0.019 15.1 1.9 0.024 14.8 1.9 1.3 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain Dynactin_p62 PF05502.13 NODE_77100_length_205_cov_0.935294_g69159_i0reverse_frame_3 - 0.18 10.6 6.1 0.19 10.5 6.1 1.0 1 0 0 1 1 1 0 Dynactin p62 family APG6_N PF17675.1 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_3 - 0.017 15.7 2.8 0.018 15.5 2.8 1.0 1 0 0 1 1 1 0 Apg6 coiled-coil region CENP-H PF05837.12 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_3 - 0.021 15.2 0.4 0.022 15.1 0.4 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) POM121 PF15229.6 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_3 - 0.15 11.7 2.0 0.23 11.1 0.7 1.8 2 0 0 2 2 2 0 POM121 family ACTH_assoc PF16102.5 NODE_77099_length_205_cov_0.935294_g69158_i0reverse_frame_3 - 0.18 12.6 0.6 0.18 12.6 0.6 2.0 1 1 1 2 2 2 0 ACTH-associated domain DUF2102 PF09875.9 NODE_77098_length_205_cov_0.935294_g69157_i0reverse_frame_3 - 0.019 14.7 1.0 0.021 14.6 1.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) Phage_Gp23 PF10669.9 NODE_77098_length_205_cov_0.935294_g69157_i0reverse_frame_3 - 0.05 13.9 0.3 0.056 13.8 0.3 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) SAP130_C PF16014.5 NODE_77097_length_205_cov_0.935294_g69156_i0forward_frame_2 - 0.036 13.1 0.2 0.039 13.0 0.2 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus DUF3098 PF11297.8 NODE_77088_length_205_cov_0.941176_g69147_i0forward_frame_2 - 0.071 12.7 0.7 0.1 12.2 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3098) Excalibur PF05901.11 NODE_77086_length_205_cov_0.941176_g69145_i0forward_frame_2 - 0.19 12.4 1.2 4.3 8.0 1.2 2.1 1 1 0 1 1 1 0 Excalibur calcium-binding domain CitMHS PF03600.16 NODE_77084_length_205_cov_0.941176_g69143_i0reverse_frame_3 - 0.013 14.7 4.4 0.014 14.6 4.4 1.0 1 0 0 1 1 1 0 Citrate transporter ZFYVE21_C PF16696.5 NODE_77081_length_205_cov_0.941176_g69140_i0forward_frame_3 - 0.13 12.2 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Zinc finger FYVE domain-containing protein 21 C-terminus Myotub-related PF06602.14 NODE_77078_length_205_cov_0.941176_g69137_i0forward_frame_3 - 0.13 11.2 0.0 0.15 11.0 0.0 1.0 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain DUF3925 PF13063.6 NODE_77077_length_205_cov_0.941176_g69136_i0reverse_frame_2 - 0.052 13.8 0.4 0.063 13.5 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3925) YdaS_antitoxin PF15943.5 NODE_77077_length_205_cov_0.941176_g69136_i0forward_frame_3 - 0.18 11.7 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Nse5 PF08691.10 NODE_77077_length_205_cov_0.941176_g69136_i0forward_frame_2 - 0.011 14.5 0.8 0.011 14.5 0.8 1.0 1 0 0 1 1 1 0 DNA repair proteins Nse5 and Nse6 DUF4042 PF13251.6 NODE_77077_length_205_cov_0.941176_g69136_i0forward_frame_2 - 0.02 14.6 0.3 0.021 14.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) DUF4400 PF14348.6 NODE_77077_length_205_cov_0.941176_g69136_i0forward_frame_2 - 0.05 13.1 0.0 0.058 12.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4400) Rod_C PF10493.9 NODE_77075_length_205_cov_0.941176_g69134_i0forward_frame_3 - 0.17 10.2 0.3 0.19 10.1 0.3 1.0 1 0 0 1 1 1 0 Rough deal protein C-terminal region K_channel_TID PF07941.11 NODE_77073_length_205_cov_0.941176_g69132_i0reverse_frame_2 - 0.048 14.1 3.3 0.07 13.6 3.3 1.2 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain NPCC PF08058.11 NODE_77069_length_205_cov_1.000000_g69128_i0forward_frame_3 - 0.054 13.6 0.7 0.067 13.2 0.7 1.1 1 0 0 1 1 1 0 Nuclear pore complex component GWT1 PF06423.12 NODE_77069_length_205_cov_1.000000_g69128_i0forward_frame_3 - 0.063 13.4 0.9 0.063 13.4 0.9 1.1 1 0 0 1 1 1 0 GWT1 Noelin-1 PF12308.8 NODE_77068_length_205_cov_1.000000_g69127_i0reverse_frame_2 - 0.1 12.6 2.3 0.13 12.3 2.3 1.1 1 0 0 1 1 1 0 Neurogenesis glycoprotein CbtA PF09490.10 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_3 - 5 6.8 5.1 5.1 6.8 5.1 1.1 1 0 0 1 1 1 0 Probable cobalt transporter subunit (CbtA) SR-25 PF10500.9 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_2 - 2.1 7.9 11.9 2.1 7.9 11.9 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CCDC24 PF15669.5 NODE_77063_length_205_cov_1.035294_g69122_i0reverse_frame_2 - 3.9 7.3 5.0 4.1 7.2 5.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family DUF1676 PF07898.13 NODE_77063_length_205_cov_1.035294_g69122_i0forward_frame_3 - 1.7 8.6 9.3 1.7 8.6 9.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) TMEM71 PF15121.6 NODE_77053_length_205_cov_1.111765_g69112_i0reverse_frame_3 - 0.13 11.9 0.3 0.15 11.7 0.3 1.1 1 0 0 1 1 1 0 TMEM71 protein family Herpes_LMP1 PF05297.11 NODE_77046_length_205_cov_1.158824_g69105_i0forward_frame_3 - 1.8 7.7 4.8 1.7 7.7 4.8 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Lamprin PF06403.11 NODE_77045_length_205_cov_1.164706_g69104_i0forward_frame_2 - 0.19 11.7 1.6 0.23 11.4 1.6 1.1 1 0 0 1 1 1 0 Lamprin Late_protein_L1 PF00500.18 NODE_77041_length_205_cov_1.170588_g69100_i0reverse_frame_2 - 0.1 11.4 0.0 0.1 11.4 0.0 1.0 1 0 0 1 1 1 0 L1 (late) protein E1-E2_ATPase PF00122.20 NODE_77039_length_205_cov_1.176471_g69098_i0forward_frame_2 - 0.00057 19.5 6.2 0.00065 19.3 6.2 1.1 1 0 0 1 1 1 1 E1-E2 ATPase zf-Mss51 PF13824.6 NODE_77025_length_205_cov_1.288235_g69084_i0forward_frame_3 - 0.15 12.2 0.9 0.17 12.0 0.9 1.2 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF4974 PF16344.5 NODE_77023_length_205_cov_1.305882_g69082_i0reverse_frame_3 - 0.054 13.5 0.1 0.068 13.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4974) Pkinase PF00069.25 NODE_77023_length_205_cov_1.305882_g69082_i0reverse_frame_2 - 7.8e-06 25.4 0.0 8.5e-06 25.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain CtsR PF05848.11 NODE_77023_length_205_cov_1.305882_g69082_i0reverse_frame_2 - 0.13 12.1 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 CtsR N-terminal HTH domain Nrap_D4 PF17405.2 NODE_77022_length_205_cov_1.305882_g69081_i0reverse_frame_3 - 0.1 11.9 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 Nmad2 PF18753.1 NODE_77021_length_205_cov_1.317647_g69080_i0reverse_frame_3 - 0.083 12.3 0.5 0.085 12.3 0.5 1.1 1 0 0 1 1 1 0 Nucleotide modification associated domain 2 Hormone_6 PF00236.18 NODE_77019_length_205_cov_1.323529_g69078_i0reverse_frame_2 - 0.035 14.1 5.3 0.042 13.8 5.3 1.2 1 0 0 1 1 1 0 Glycoprotein hormone YacG PF03884.14 NODE_77015_length_205_cov_1.335294_g69074_i0reverse_frame_2 - 0.15 11.8 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG Cu2_monooxygen PF01082.20 NODE_77015_length_205_cov_1.335294_g69074_i0forward_frame_2 - 0.05 13.8 0.1 0.056 13.7 0.1 1.0 1 0 0 1 1 1 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain AKAP7_NLS PF10469.9 NODE_77014_length_205_cov_1.341176_g69073_i0reverse_frame_2 - 0.00044 20.2 0.1 0.00051 20.0 0.1 1.0 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain zf-DNA_Pol PF08996.10 NODE_77009_length_205_cov_1.376471_g69068_i0reverse_frame_2 - 0.04 13.7 1.0 0.044 13.5 1.0 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger RE_SinI PF09570.10 NODE_77007_length_205_cov_1.376471_g69066_i0forward_frame_3 - 0.1 11.8 0.1 0.14 11.4 0.1 1.3 1 1 0 1 1 1 0 SinI restriction endonuclease FGFR3_TM PF18123.1 NODE_77006_length_205_cov_1.382353_g69065_i0reverse_frame_3 - 0.46 10.0 3.2 0.65 9.6 3.2 1.2 1 0 0 1 1 1 0 Fibroblast growth factor receptor 3 transmembrane domain zf-TRAF PF02176.18 NODE_77004_length_205_cov_1.394118_g69063_i0reverse_frame_2 - 2.4e-09 37.7 4.2 6.3e-09 36.4 4.1 1.6 1 1 0 1 1 1 1 TRAF-type zinc finger Sina PF03145.16 NODE_77004_length_205_cov_1.394118_g69063_i0reverse_frame_2 - 0.014 15.4 3.5 0.59 10.1 0.5 2.0 1 1 1 2 2 2 0 Seven in absentia protein family zf-TRAF_2 PF15965.5 NODE_77004_length_205_cov_1.394118_g69063_i0reverse_frame_2 - 0.04 14.4 2.4 0.17 12.4 2.0 1.9 1 1 1 2 2 2 0 TRAF-like zinc-finger Sulfatase PF00884.23 NODE_76998_length_205_cov_1.400000_g69057_i0forward_frame_3 - 0.08 12.3 0.1 0.083 12.3 0.1 1.0 1 0 0 1 1 1 0 Sulfatase DUF971 PF06155.12 NODE_76997_length_205_cov_1.400000_g69056_i0reverse_frame_3 - 4 8.2 6.6 1.8 9.2 4.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF971) SCPU PF05229.15 NODE_76997_length_205_cov_1.400000_g69056_i0forward_frame_3 - 0.018 15.4 0.1 0.02 15.3 0.1 1.0 1 0 0 1 1 1 0 Spore Coat Protein U domain BaffR-Tall_bind PF09256.10 NODE_76992_length_205_cov_1.405882_g69051_i0forward_frame_3 - 0.011 15.5 0.9 0.036 13.8 0.9 1.9 1 0 0 1 1 1 0 BAFF-R, TALL-1 binding zf-C3HC4_4 PF15227.6 NODE_76991_length_205_cov_1.405882_g69050_i0reverse_frame_2 - 8.7 6.6 24.9 3.2 8.0 16.1 3.1 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING PcF PF09461.10 NODE_76985_length_205_cov_1.411765_g69044_i0reverse_frame_2 - 0.041 14.2 2.7 0.041 14.2 2.7 1.4 2 0 0 2 2 2 0 Phytotoxin PcF protein Ada_Zn_binding PF02805.16 NODE_76983_length_205_cov_1.411765_g69042_i0reverse_frame_3 - 0.023 14.7 1.0 0.038 14.0 1.0 1.4 1 0 0 1 1 1 0 Metal binding domain of Ada IBR PF01485.21 NODE_76981_length_205_cov_1.411765_g69040_i0reverse_frame_2 - 0.3 11.3 6.7 0.48 10.7 6.7 1.4 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain FERM_N PF09379.10 NODE_76977_length_205_cov_1.411765_g69036_i0reverse_frame_3 - 0.13 12.2 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 FERM N-terminal domain Resistin PF06954.11 NODE_76977_length_205_cov_1.411765_g69036_i0reverse_frame_2 - 0.11 13.1 6.6 0.12 12.9 6.6 1.1 1 0 0 1 1 1 0 Resistin MatE PF01554.18 NODE_76977_length_205_cov_1.411765_g69036_i0forward_frame_2 - 1.7e-09 37.6 0.5 1.8e-09 37.5 0.5 1.0 1 0 0 1 1 1 1 MatE RecA_dep_nuc PF16786.5 NODE_76976_length_205_cov_1.411765_g69035_i0reverse_frame_3 - 0.13 12.4 1.7 0.15 12.3 1.7 1.1 1 0 0 1 1 1 0 Recombination enhancement, RecA-dependent nuclease DUF5387 PF17361.2 NODE_76970_length_205_cov_1.429412_g69029_i0forward_frame_2 - 0.024 14.3 0.1 0.025 14.3 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5387) RELT PF12606.8 NODE_76968_length_205_cov_1.458824_g69027_i0reverse_frame_2 - 0.025 13.6 0.1 0.039 12.9 0.1 1.2 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 DUF3636 PF12331.8 NODE_76968_length_205_cov_1.458824_g69027_i0reverse_frame_2 - 0.064 13.1 0.0 0.064 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3636) DUF2300 PF10062.9 NODE_76968_length_205_cov_1.458824_g69027_i0forward_frame_3 - 0.014 15.5 4.6 0.016 15.3 4.6 1.0 1 0 0 1 1 1 0 Predicted secreted protein (DUF2300) Cortexin PF11057.8 NODE_76966_length_205_cov_1.470588_g69025_i0forward_frame_3 - 0.22 11.4 1.7 0.26 11.2 1.7 1.2 1 0 0 1 1 1 0 Cortexin of kidney DUF179 PF02622.15 NODE_76965_length_205_cov_1.470588_g69024_i0reverse_frame_3 - 8e-07 29.1 0.0 8.5e-07 29.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 GUCT PF08152.12 NODE_76964_length_205_cov_1.476471_g69023_i0reverse_frame_2 - 0.12 12.6 0.1 0.25 11.7 0.0 1.6 1 1 0 1 1 1 0 GUCT (NUC152) domain TMEM190 PF15431.6 NODE_76964_length_205_cov_1.476471_g69023_i0forward_frame_2 - 0.073 13.2 1.0 0.07 13.3 1.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 190 ICMT PF04140.14 NODE_76961_length_205_cov_1.494118_g69020_i0forward_frame_3 - 0.1 13.0 3.2 0.14 12.6 3.2 1.3 1 0 0 1 1 1 0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family R3H PF01424.22 NODE_76956_length_205_cov_1.511765_g69015_i0reverse_frame_2 - 0.0016 18.4 0.1 0.002 18.0 0.1 1.3 1 1 0 1 1 1 1 R3H domain Herpes_UL46 PF03387.14 NODE_76956_length_205_cov_1.511765_g69015_i0forward_frame_3 - 0.0012 17.7 0.7 0.0014 17.5 0.7 1.0 1 0 0 1 1 1 1 Herpesvirus UL46 protein Protein_K PF12283.8 NODE_76950_length_205_cov_1.541176_g69009_i0reverse_frame_2 - 0.014 15.6 0.2 0.035 14.3 0.1 1.6 1 1 1 2 2 2 0 Bacteriophage protein K Glu_synthase PF01645.17 NODE_76941_length_205_cov_1.582353_g69000_i0reverse_frame_3 - 0.15 11.2 0.9 0.16 11.1 0.9 1.1 1 0 0 1 1 1 0 Conserved region in glutamate synthase DUF1601 PF07671.11 NODE_76938_length_205_cov_1.594118_g68997_i0forward_frame_2 - 0.16 11.9 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1601) DUF2401 PF10287.9 NODE_76936_length_205_cov_1.600000_g68995_i0reverse_frame_2 - 0.68 9.5 3.1 0.74 9.4 3.1 1.1 1 0 0 1 1 1 0 Putative TOS1-like glycosyl hydrolase (DUF2401) Corona_NS3b PF03053.14 NODE_76931_length_205_cov_1.647059_g68990_i0reverse_frame_2 - 0.13 12.0 1.9 0.13 12.0 1.9 1.0 1 0 0 1 1 1 0 ORF3b coronavirus protein DUF5527 PF17665.1 NODE_76931_length_205_cov_1.647059_g68990_i0reverse_frame_2 - 6.5 6.3 10.6 0.33 10.5 2.6 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5527) AIM3 PF17096.5 NODE_76930_length_205_cov_1.676471_g68989_i0reverse_frame_2 - 0.034 15.1 0.9 0.04 14.8 0.9 1.2 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 RVT_2 PF07727.14 NODE_76929_length_205_cov_1.711765_g68988_i0reverse_frame_3 - 2.2e-05 24.2 0.0 2.6e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) TPR_7 PF13176.6 NODE_76926_length_205_cov_1.717647_g68985_i0forward_frame_2 - 0.015 15.3 0.3 0.094 12.8 0.1 2.3 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_76926_length_205_cov_1.717647_g68985_i0forward_frame_2 - 0.021 14.7 0.4 0.035 14.0 0.4 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat RPN7 PF10602.9 NODE_76926_length_205_cov_1.717647_g68985_i0forward_frame_2 - 0.066 12.9 0.1 0.079 12.7 0.1 1.1 1 0 0 1 1 1 0 26S proteasome subunit RPN7 zf_C2H2_10 PF18414.1 NODE_76925_length_205_cov_1.717647_g68984_i0reverse_frame_2 - 0.0075 15.8 3.9 0.015 14.9 3.9 1.5 1 0 0 1 1 1 1 C2H2 type zinc-finger FAP206 PF12018.8 NODE_76919_length_205_cov_1.794118_g68978_i0reverse_frame_3 - 0.0067 16.0 0.2 0.02 14.4 0.0 1.7 1 1 1 2 2 2 1 Domain of unknown function IGF2_C PF08365.11 NODE_76919_length_205_cov_1.794118_g68978_i0reverse_frame_2 - 0.005 16.8 0.9 0.0062 16.5 0.9 1.2 1 0 0 1 1 1 1 Insulin-like growth factor II E-peptide DUF4131 PF13567.6 NODE_76919_length_205_cov_1.794118_g68978_i0forward_frame_2 - 1.1 8.8 5.2 1.7 8.3 5.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) PPV_E1_N PF00524.18 NODE_76917_length_205_cov_1.805882_g68976_i0reverse_frame_2 - 0.13 12.7 0.0 0.14 12.6 0.0 1.0 1 0 0 1 1 1 0 E1 Protein, N terminal domain Kelch_3 PF13415.6 NODE_76915_length_205_cov_1.823529_g68974_i0forward_frame_2 - 0.16 12.3 0.2 0.77 10.1 0.1 1.9 2 0 0 2 2 2 0 Galactose oxidase, central domain DUF515 PF04415.12 NODE_76914_length_205_cov_1.823529_g68973_i0forward_frame_3 - 1.9 6.8 5.6 2.3 6.5 5.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) C_Hendra PF16821.5 NODE_76913_length_205_cov_1.823529_g68972_i0reverse_frame_2 - 0.0086 16.0 0.7 0.0094 15.8 0.7 1.1 1 0 0 1 1 1 1 C protein from hendra and measles viruses Imp-YgjV PF10688.9 NODE_76905_length_205_cov_1.900000_g68964_i0forward_frame_3 - 0.053 13.3 1.1 0.058 13.2 1.1 1.0 1 0 0 1 1 1 0 Bacterial inner membrane protein DUF2101 PF09874.9 NODE_76904_length_205_cov_1.917647_g68963_i0reverse_frame_2 - 0.088 12.5 3.0 0.094 12.4 3.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Ycf70 PF17382.2 NODE_76902_length_205_cov_1.947059_g68961_i0forward_frame_2 - 1.6 9.2 3.7 0.57 10.6 0.6 1.7 1 1 1 2 2 2 0 Uncharacterized Ycf70-like CLASP_N PF12348.8 NODE_76901_length_205_cov_1.947059_g68960_i0reverse_frame_2 - 2.4e-06 27.3 0.2 2.4e-06 27.3 0.2 1.1 1 0 0 1 1 1 1 CLASP N terminal ApoLp-III PF07464.11 NODE_76901_length_205_cov_1.947059_g68960_i0reverse_frame_2 - 0.059 13.5 0.1 0.064 13.3 0.1 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) RTP1_C1 PF10363.9 NODE_76901_length_205_cov_1.947059_g68960_i0reverse_frame_2 - 0.072 13.3 0.2 0.083 13.1 0.2 1.1 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 Ezh2_MCSS PF18600.1 NODE_76899_length_205_cov_1.976471_g68958_i0reverse_frame_2 - 0.026 14.1 0.1 0.038 13.6 0.1 1.3 1 0 0 1 1 1 0 MCSS domain 6PF2K PF01591.18 NODE_76899_length_205_cov_1.976471_g68958_i0reverse_frame_2 - 0.032 13.5 0.2 0.037 13.3 0.2 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase DUF4478 PF14793.6 NODE_76899_length_205_cov_1.976471_g68958_i0forward_frame_3 - 0.077 12.9 0.0 0.092 12.6 0.0 1.1 1 0 0 1 1 1 0 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Pacifastin_I PF05375.13 NODE_76897_length_205_cov_2.011765_g68956_i0reverse_frame_3 - 0.03 14.1 0.5 0.039 13.7 0.5 1.2 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) Protamine_P1 PF00260.20 NODE_76893_length_205_cov_2.064706_g68952_i0reverse_frame_2 - 0.19 11.9 12.1 0.31 11.2 12.0 1.5 1 1 0 1 1 1 0 Protamine P1 DUF4386 PF14329.6 NODE_76891_length_205_cov_2.076471_g68950_i0reverse_frame_2 - 0.14 12.0 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4386) Pkinase PF00069.25 NODE_76889_length_205_cov_2.094118_g68948_i0forward_frame_2 - 0.019 14.4 0.1 0.019 14.4 0.1 1.3 1 1 0 1 1 1 0 Protein kinase domain FAM194 PF14977.6 NODE_76884_length_205_cov_2.152941_g68943_i0reverse_frame_3 - 0.11 11.8 0.2 0.12 11.7 0.2 1.1 1 0 0 1 1 1 0 FAM194 protein PGG PF13962.6 NODE_76882_length_205_cov_2.170588_g68941_i0reverse_frame_3 - 0.012 15.4 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function COQ9 PF08511.11 NODE_76882_length_205_cov_2.170588_g68941_i0reverse_frame_3 - 0.082 12.7 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 COQ9 Orf78 PF06024.12 NODE_76882_length_205_cov_2.170588_g68941_i0reverse_frame_3 - 0.082 13.2 0.3 0.088 13.1 0.3 1.1 1 0 0 1 1 1 0 Orf78 (ac78) DUF4326 PF14216.6 NODE_76881_length_205_cov_2.188235_g68940_i0forward_frame_3 - 0.00017 22.3 0.0 0.00019 22.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4326) DsbD PF02683.15 NODE_76880_length_205_cov_2.211765_g68939_i0forward_frame_2 - 0.038 13.9 0.2 0.042 13.7 0.2 1.0 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region Herpeto_peptide PF14409.6 NODE_76879_length_205_cov_2.229412_g68938_i0forward_frame_2 - 0.12 12.6 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 Ribosomally synthesized peptide in Herpetosiphon HOK_GEF PF01848.16 NODE_76876_length_205_cov_2.323529_g68935_i0forward_frame_3 - 0.058 12.8 0.5 0.21 11.0 0.5 1.8 1 1 0 1 1 1 0 Hok/gef family Bac_chlorC PF02043.17 NODE_76874_length_205_cov_2.347059_g68933_i0reverse_frame_3 - 0.0041 17.1 0.4 0.0051 16.8 0.4 1.1 1 0 0 1 1 1 1 Bacteriochlorophyll C binding protein RBP_receptor PF14752.6 NODE_76874_length_205_cov_2.347059_g68933_i0forward_frame_2 - 0.15 10.6 0.1 0.17 10.4 0.1 1.0 1 0 0 1 1 1 0 Retinol binding protein receptor DUF4859 PF16151.5 NODE_76872_length_205_cov_2.411765_g68931_i0forward_frame_2 - 0.034 14.0 0.1 0.043 13.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4859) TERF2_RBM PF16772.5 NODE_76871_length_205_cov_2.417647_g68930_i0forward_frame_2 - 0.15 11.5 0.0 0.29 10.6 0.0 1.5 1 0 0 1 1 1 0 Telomeric repeat-binding factor 2 Rap1-binding motif Stn1 PF10451.9 NODE_76867_length_205_cov_2.511765_g68926_i0reverse_frame_2 - 0.034 13.1 0.1 0.043 12.8 0.1 1.1 1 0 0 1 1 1 0 Telomere regulation protein Stn1 S1_2 PF13509.6 NODE_76867_length_205_cov_2.511765_g68926_i0reverse_frame_2 - 0.1 12.7 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 S1 domain WAK PF08488.11 NODE_76864_length_205_cov_2.576471_g68923_i0forward_frame_2 - 0.031 14.8 0.3 0.049 14.2 0.0 1.5 1 1 1 2 2 2 0 Wall-associated kinase UPF0547 PF10571.9 NODE_76863_length_205_cov_2.588235_g68922_i0forward_frame_2 - 0.067 13.3 6.0 1 9.5 0.3 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-CpG_bind_C PF12269.8 NODE_76861_length_205_cov_2.641176_g68920_i0reverse_frame_3 - 0.022 14.5 0.1 0.024 14.4 0.1 1.1 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain LRR_6 PF13516.6 NODE_76861_length_205_cov_2.641176_g68920_i0reverse_frame_3 - 0.039 14.0 0.8 7.7 6.9 0.3 2.8 3 0 0 3 3 3 0 Leucine Rich repeat DUF1951 PF09188.10 NODE_76861_length_205_cov_2.641176_g68920_i0forward_frame_3 - 0.059 13.4 0.7 0.1 12.6 0.5 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF1951) Ral PF11058.8 NODE_76861_length_205_cov_2.641176_g68920_i0forward_frame_2 - 3.3 7.3 5.4 2.1 8.0 0.1 2.1 1 1 1 2 2 2 0 Antirestriction protein Ral ATE_N PF04376.13 NODE_76859_length_205_cov_2.752941_g68918_i0reverse_frame_2 - 0.06 13.7 0.1 0.062 13.7 0.1 1.3 1 1 0 1 1 1 0 Arginine-tRNA-protein transferase, N terminus Sec62 PF03839.16 NODE_76858_length_205_cov_2.835294_g68917_i0forward_frame_2 - 1.3e-05 24.8 0.2 1.3e-05 24.8 0.2 1.1 1 0 0 1 1 1 1 Translocation protein Sec62 DUF4577 PF15145.6 NODE_76855_length_205_cov_2.858824_g68914_i0forward_frame_3 - 0.0068 16.4 0.2 0.0085 16.1 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4577) Nsp1_C PF05064.13 NODE_76855_length_205_cov_2.858824_g68914_i0forward_frame_3 - 0.055 13.3 0.0 0.055 13.3 0.0 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region RNase_PH PF01138.21 NODE_76854_length_205_cov_2.935294_g68913_i0forward_frame_2 - 0.027 15.0 0.0 0.033 14.7 0.0 1.1 1 0 0 1 1 1 0 3' exoribonuclease family, domain 1 DUF4099 PF13351.6 NODE_76852_length_205_cov_3.052941_g68911_i0forward_frame_3 - 0.15 12.3 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4099) DUF4658 PF15555.6 NODE_76850_length_205_cov_3.082353_g68909_i0forward_frame_3 - 0.057 13.5 1.0 0.062 13.4 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) Sec15 PF04091.12 NODE_76847_length_205_cov_3.247059_g68906_i0forward_frame_3 - 0.15 11.5 1.6 0.16 11.4 1.6 1.0 1 0 0 1 1 1 0 Exocyst complex subunit Sec15-like UPF0181 PF03701.14 NODE_76846_length_205_cov_3.547059_g68905_i0reverse_frame_2 - 0.04 13.5 0.4 0.07 12.8 0.4 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0181) H2O2_YaaD PF03883.14 NODE_76845_length_205_cov_3.552941_g68904_i0forward_frame_3 - 0.093 12.2 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Peroxide stress protein YaaA Glyco_transf_20 PF00982.21 NODE_76844_length_205_cov_3.605882_g68903_i0reverse_frame_3 - 0.11 11.2 0.3 0.1 11.2 0.3 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 BESS PF02944.20 NODE_76841_length_205_cov_4.670588_g68900_i0reverse_frame_2 - 0.19 11.6 3.9 1.3 8.9 0.8 2.2 2 0 0 2 2 2 0 BESS motif SKN1 PF03935.15 NODE_76839_length_205_cov_12.329412_g68898_i0forward_frame_2 - 0.38 9.1 2.2 0.38 9.1 2.2 1.0 1 0 0 1 1 1 0 Beta-glucan synthesis-associated protein (SKN1) AID PF18767.1 NODE_76836_length_205_cov_14.376471_g68895_i0forward_frame_2 - 0.034 14.2 0.1 0.041 13.9 0.1 1.1 1 0 0 1 1 1 0 Activation induced deaminase Cadherin_tail PF15974.5 NODE_76833_length_205_cov_23.247059_g68892_i0reverse_frame_2 - 0.0033 17.7 1.6 0.0034 17.7 1.6 1.0 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region Rer1 PF03248.13 NODE_76833_length_205_cov_23.247059_g68892_i0forward_frame_3 - 3.7 7.2 10.0 4.5 7.0 10.0 1.2 1 0 0 1 1 1 0 Rer1 family Mei5 PF10376.9 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.00072 19.5 13.0 0.00082 19.3 13.0 1.0 1 0 0 1 1 1 1 Double-strand recombination repair protein APG6_N PF17675.1 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.041 14.4 15.5 0.047 14.2 15.5 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Ax_dynein_light PF10211.9 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.056 13.4 14.1 0.059 13.3 14.1 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain DPM3 PF08285.11 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.19 11.9 0.5 0.23 11.7 0.5 1.3 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Herpes_UL6 PF01763.16 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.32 9.5 8.0 0.34 9.4 8.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like FlxA PF14282.6 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.41 10.7 14.1 0.52 10.3 11.1 1.9 1 1 1 2 2 2 0 FlxA-like protein CCDC-167 PF15188.6 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.47 10.8 14.1 0.76 10.2 14.1 1.4 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 MctB PF11382.8 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.94 9.1 3.9 1 9.0 3.9 1.1 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB Spc24 PF08286.11 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 0.94 9.7 10.2 1 9.6 10.2 1.2 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF4407 PF14362.6 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 1.7 7.9 7.8 1.8 7.9 7.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4140 PF13600.6 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 3.1 8.3 7.6 5 7.6 7.6 1.5 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) TMPIT PF07851.13 NODE_76832_length_205_cov_23.417647_g68891_i0reverse_frame_3 - 7.3 5.7 11.0 7.4 5.7 11.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein zf-NPL4 PF05020.15 NODE_76829_length_205_cov_30.694118_g68888_i0forward_frame_3 - 0.057 13.6 0.2 0.063 13.4 0.2 1.1 1 0 0 1 1 1 0 NPL4 family, putative zinc binding region Adeno_GP19K PF04881.13 NODE_76829_length_205_cov_30.694118_g68888_i0forward_frame_2 - 0.092 12.7 2.1 0.1 12.6 2.1 1.1 1 0 0 1 1 1 0 Adenovirus GP19K FeoB_Cyto PF17910.1 NODE_76822_length_205_cov_37.211765_g68881_i0reverse_frame_3 - 0.025 15.1 0.1 0.029 14.9 0.1 1.1 1 0 0 1 1 1 0 FeoB cytosolic helical domain T3SS_ATPase_C PF18269.1 NODE_76818_length_205_cov_39.058824_g68877_i0forward_frame_2 - 0.12 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 T3SS EscN ATPase C-terminal domain MORN PF02493.20 NODE_76816_length_205_cov_42.341176_g68875_i0reverse_frame_2 - 4.7e-06 26.2 1.4 8.4e-06 25.4 1.4 1.5 1 0 0 1 1 1 1 MORN repeat DegT_DnrJ_EryC1 PF01041.17 NODE_76815_length_205_cov_42.888235_g68874_i0reverse_frame_2 - 1.2e-05 24.8 0.0 1.4e-05 24.6 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family TCR PF03638.15 NODE_76814_length_205_cov_43.147059_g68873_i0reverse_frame_3 - 0.31 11.4 6.1 0.58 10.5 6.1 1.6 1 1 0 1 1 1 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain MelC1 PF06236.11 NODE_76814_length_205_cov_43.147059_g68873_i0forward_frame_2 - 0.079 13.0 0.0 0.1 12.7 0.0 1.3 1 1 0 1 1 1 0 Tyrosinase co-factor MelC1 DUF2162 PF09930.9 NODE_76814_length_205_cov_43.147059_g68873_i0forward_frame_2 - 0.24 10.8 0.1 0.28 10.6 0.1 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) MNNL PF07657.13 NODE_76806_length_205_cov_50.076471_g68865_i0reverse_frame_2 - 0.037 14.1 0.2 0.043 13.8 0.2 1.2 1 0 0 1 1 1 0 N terminus of Notch ligand DUF2199 PF09965.9 NODE_76806_length_205_cov_50.076471_g68865_i0forward_frame_2 - 0.14 12.2 0.5 0.18 11.9 0.5 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2199) GerA PF03323.13 NODE_76800_length_205_cov_55.111765_g68859_i0forward_frame_3 - 0.17 10.4 0.1 0.17 10.3 0.1 1.0 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein DUF4603 PF15376.6 NODE_76799_length_205_cov_56.500000_g68858_i0forward_frame_3 - 0.14 9.6 2.4 0.15 9.5 2.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4603) DUF1478 PF07349.11 NODE_76798_length_205_cov_58.411765_g68857_i0forward_frame_2 - 0.016 15.1 0.2 0.017 15.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1478) Herpes_U5 PF05999.11 NODE_76795_length_205_cov_68.500000_g68854_i0reverse_frame_3 - 0.12 11.2 0.2 0.13 10.9 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus U5-like family COX5B PF01215.19 NODE_76795_length_205_cov_68.500000_g68854_i0reverse_frame_2 - 0.033 13.9 0.0 0.037 13.7 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit Vb DHODB_Fe-S_bind PF10418.9 NODE_76790_length_205_cov_73.747059_g68849_i0forward_frame_2 - 0.04 13.7 0.0 0.069 13.0 0.0 1.5 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ETRAMP PF09716.10 NODE_76788_length_205_cov_90.223529_g68847_i0forward_frame_2 - 5.4 7.1 7.0 5.8 7.0 7.0 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Coilin_N PF15862.5 NODE_76788_length_205_cov_90.223529_g68847_i0forward_frame_2 - 9.2 6.1 13.5 11 5.9 13.5 1.1 1 0 0 1 1 1 0 Coilin N-terminus Cullin_Nedd8 PF10557.9 NODE_76785_length_205_cov_92.770588_g68844_i0reverse_frame_2 - 8.8e-07 28.9 0.1 8.8e-07 28.9 0.1 2.0 2 0 0 2 2 2 1 Cullin protein neddylation domain DUF2201_N PF13203.6 NODE_76785_length_205_cov_92.770588_g68844_i0reverse_frame_2 - 0.013 15.1 0.0 0.013 15.1 0.0 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain zf-RING_6 PF14835.6 NODE_76784_length_205_cov_95.964706_g68843_i0forward_frame_2 - 0.038 13.9 1.4 0.053 13.4 0.2 1.7 1 1 1 2 2 2 0 zf-RING of BARD1-type protein PcrB PF01884.17 NODE_76784_length_205_cov_95.964706_g68843_i0forward_frame_2 - 0.097 12.1 0.0 0.097 12.1 0.0 1.0 1 0 0 1 1 1 0 PcrB family DUF2254 PF10011.9 NODE_76776_length_205_cov_144.376471_g68835_i0forward_frame_3 - 4 6.1 7.2 4.4 6.0 7.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks398.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks398.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks398.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks398.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- mRNA_decap_C PF16741.5 NODE_76775_length_205_cov_149.711765_g68834_i0forward_frame_2 - 0.053 12.8 0.1 0.075 12.3 0.1 1.3 1 0 0 1 1 1 0 mRNA-decapping enzyme C-terminus DUF4702 PF15774.5 NODE_76775_length_205_cov_149.711765_g68834_i0forward_frame_2 - 0.23 10.4 0.0 0.24 10.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4702) Lamprin PF06403.11 NODE_76768_length_205_cov_228.005882_g68827_i0forward_frame_2 - 5 7.1 15.8 12 5.9 15.8 1.7 1 1 0 1 1 1 0 Lamprin SCAMP PF04144.13 NODE_76767_length_205_cov_228.770588_g68826_i0forward_frame_2 - 0.0055 17.0 1.5 0.0056 17.0 1.5 1.0 1 0 0 1 1 1 1 SCAMP family SWIRM-assoc_2 PF16496.5 NODE_76766_length_205_cov_246.941176_g68825_i0forward_frame_2 - 0.33 9.8 3.8 0.3 9.9 3.8 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal DUF2701 PF10857.8 NODE_76765_length_205_cov_250.147059_g68824_i0reverse_frame_2 - 0.17 11.9 6.6 0.22 11.6 6.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) FixH PF05751.11 NODE_76765_length_205_cov_250.147059_g68824_i0reverse_frame_2 - 0.76 9.8 5.6 0.92 9.5 5.6 1.1 1 0 0 1 1 1 0 FixH DUF2600 PF10776.9 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_3 - 0.0052 15.7 1.1 0.0059 15.5 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2600) AP3D1 PF06375.11 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_2 - 0.2 11.9 10.9 0.2 11.9 10.9 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Peptidase_S49_N PF08496.10 NODE_76765_length_205_cov_250.147059_g68824_i0forward_frame_2 - 2.5 8.2 9.7 2.7 8.1 9.7 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Glyco_transf_20 PF00982.21 NODE_76764_length_205_cov_276.311765_g68823_i0reverse_frame_3 - 0.084 11.5 0.0 5.4 5.6 0.0 2.0 2 0 0 2 2 2 0 Glycosyltransferase family 20 FUSC-like PF12805.7 NODE_76763_length_205_cov_315.900000_g68822_i0reverse_frame_3 - 0.2 10.7 0.5 0.23 10.5 0.5 1.0 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS DUF5480 PF17576.2 NODE_76758_length_206_cov_0.783626_g68817_i0reverse_frame_3 - 0.066 13.2 0.0 0.075 13.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5480) RGP PF03214.13 NODE_76754_length_206_cov_0.865497_g68813_i0reverse_frame_3 - 0.11 11.7 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Reversibly glycosylated polypeptide AHJR-like PF18743.1 NODE_76751_length_206_cov_0.929825_g68810_i0reverse_frame_3 - 0.038 13.5 0.1 0.042 13.4 0.1 1.1 1 0 0 1 1 1 0 REase_AHJR-like DUF1035 PF06281.12 NODE_76751_length_206_cov_0.929825_g68810_i0forward_frame_3 - 0.067 13.2 0.0 0.069 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1035) zf-MIZ PF02891.20 NODE_76746_length_206_cov_0.929825_g68805_i0reverse_frame_2 - 0.045 13.5 0.1 0.056 13.2 0.1 1.3 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger ANP PF00212.18 NODE_76744_length_206_cov_0.935673_g68803_i0forward_frame_3 - 0.037 14.2 0.3 0.037 14.2 0.3 2.2 3 0 0 3 3 3 0 Atrial natriuretic peptide DUF2564 PF10819.8 NODE_76740_length_206_cov_0.935673_g68799_i0reverse_frame_3 - 0.1 13.0 0.0 0.16 12.3 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2564) DUF2576 PF10845.8 NODE_76737_length_206_cov_0.935673_g68796_i0reverse_frame_3 - 0.033 13.8 0.0 0.042 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) TMEM108 PF15759.5 NODE_76734_length_206_cov_0.935673_g68793_i0reverse_frame_3 - 0.27 10.2 3.0 0.29 10.1 3.0 1.0 1 0 0 1 1 1 0 TMEM108 family BC10 PF06726.12 NODE_76728_length_206_cov_0.947368_g68787_i0forward_frame_2 - 0.015 15.5 0.1 0.018 15.2 0.1 1.2 1 0 0 1 1 1 0 Bladder cancer-related protein BC10 DpnI_C PF17726.1 NODE_76727_length_206_cov_0.964912_g68786_i0reverse_frame_2 - 0.042 14.0 0.7 0.063 13.4 0.6 1.5 1 1 0 1 1 1 0 Dam-replacing HTH domain zinc_ribbon_12 PF11331.8 NODE_76726_length_206_cov_0.964912_g68785_i0reverse_frame_2 - 0.0038 17.0 0.3 0.0053 16.5 0.3 1.3 1 0 0 1 1 1 1 Probable zinc-ribbon domain DUF5402 PF17393.2 NODE_76725_length_206_cov_0.976608_g68784_i0reverse_frame_2 - 0.14 12.1 0.1 0.18 11.8 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5402) Peptidase_C9 PF01707.16 NODE_76723_length_206_cov_0.976608_g68782_i0reverse_frame_3 - 0.0076 15.9 0.0 0.0076 15.9 0.0 1.0 1 0 0 1 1 1 1 Peptidase family C9 HLH PF00010.26 NODE_76718_length_206_cov_1.011696_g68777_i0reverse_frame_3 - 0.06 13.3 0.9 0.091 12.7 0.9 1.2 1 0 0 1 1 1 0 Helix-loop-helix DNA-binding domain Sporozoite_P67 PF05642.11 NODE_76714_length_206_cov_1.035088_g68773_i0reverse_frame_2 - 5.8 4.9 8.9 5.9 4.8 8.9 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen CAP_N PF01213.19 NODE_76714_length_206_cov_1.035088_g68773_i0forward_frame_3 - 1.4 8.4 6.3 1.2 8.5 6.3 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal IR1-M PF12185.8 NODE_76711_length_206_cov_1.052632_g68770_i0forward_frame_3 - 0.048 13.6 0.0 0.066 13.2 0.0 1.2 1 0 0 1 1 1 0 Nup358/RanBP2 E3 ligase domain Cu_bind_like PF02298.17 NODE_76710_length_206_cov_1.058480_g68769_i0forward_frame_2 - 0.14 12.2 0.2 0.16 12.0 0.2 1.3 1 1 0 1 1 1 0 Plastocyanin-like domain Methyltransf_13 PF08421.11 NODE_76705_length_206_cov_1.076023_g68764_i0reverse_frame_3 - 0.4 11.0 9.6 1.6 9.1 0.4 2.2 1 1 1 2 2 2 0 Putative zinc binding domain NDUF_B12 PF08122.12 NODE_76703_length_206_cov_1.076023_g68762_i0reverse_frame_2 - 0.0065 16.5 0.3 0.0076 16.3 0.3 1.2 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase B12 subunit family Glu_syn_central PF04898.14 NODE_76700_length_206_cov_1.087719_g68759_i0forward_frame_2 - 4.3e-05 23.1 0.0 4.3e-05 23.1 0.0 1.0 1 0 0 1 1 1 1 Glutamate synthase central domain PelG PF16933.5 NODE_76700_length_206_cov_1.087719_g68759_i0forward_frame_2 - 0.018 13.9 0.0 0.02 13.8 0.0 1.0 1 0 0 1 1 1 0 Putative exopolysaccharide Exporter (EPS-E) Lact-deh-memb PF09330.11 NODE_76699_length_206_cov_1.087719_g68758_i0forward_frame_2 - 0.0018 17.7 2.1 0.0019 17.6 2.1 1.0 1 0 0 1 1 1 1 D-lactate dehydrogenase, membrane binding Humanin PF15040.6 NODE_76694_length_206_cov_1.105263_g68753_i0reverse_frame_3 - 0.11 12.0 0.3 0.16 11.4 0.3 1.2 1 0 0 1 1 1 0 Humanin family DUF2749 PF10907.8 NODE_76691_length_206_cov_1.122807_g68750_i0forward_frame_3 - 0.023 14.8 0.0 0.028 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) AAA_lid_7 PF17867.1 NODE_76689_length_206_cov_1.122807_g68748_i0forward_frame_2 - 9.8e-08 32.2 0.0 1e-07 32.1 0.0 1.1 1 0 0 1 1 1 1 Midasin AAA lid domain DUF5502 PF17606.2 NODE_76688_length_206_cov_1.152047_g68747_i0reverse_frame_2 - 0.073 13.8 0.7 0.086 13.5 0.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5502) Pyridoxal_deC PF00282.19 NODE_76688_length_206_cov_1.152047_g68747_i0forward_frame_2 - 0.0019 17.0 0.0 0.0019 17.0 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain DUF999 PF06198.11 NODE_76681_length_206_cov_1.169591_g68740_i0reverse_frame_2 - 0.078 13.0 0.2 0.084 12.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF999) RBDV_coat PF06593.11 NODE_76680_length_206_cov_1.169591_g68739_i0reverse_frame_2 - 0.23 10.9 0.4 0.24 10.8 0.4 1.1 1 0 0 1 1 1 0 Raspberry bushy dwarf virus coat protein BMF PF15185.6 NODE_76678_length_206_cov_1.192982_g68737_i0reverse_frame_2 - 0.14 11.9 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis DUF2585 PF10755.9 NODE_76677_length_206_cov_1.192982_g68736_i0reverse_frame_2 - 0.14 11.8 0.4 0.15 11.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2585) DUF1964 PF09244.10 NODE_76677_length_206_cov_1.192982_g68736_i0forward_frame_3 - 0.098 13.1 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1964) DUF764 PF05561.11 NODE_76676_length_206_cov_1.204678_g68735_i0forward_frame_3 - 0.039 13.7 0.1 0.041 13.7 0.1 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF764) tRNA_anti-codon PF01336.25 NODE_76676_length_206_cov_1.204678_g68735_i0forward_frame_2 - 0.00012 22.0 0.4 0.00014 21.8 0.4 1.0 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain HTH_44 PF14641.6 NODE_76675_length_206_cov_1.204678_g68734_i0reverse_frame_3 - 0.078 13.4 0.1 0.094 13.2 0.1 1.1 1 0 0 1 1 1 0 Helix-turn-helix DNA-binding domain of SPT6 DUF4179 PF13786.6 NODE_76675_length_206_cov_1.204678_g68734_i0forward_frame_2 - 0.19 12.2 0.5 0.24 11.9 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) GST_C_6 PF17171.4 NODE_76671_length_206_cov_1.204678_g68730_i0reverse_frame_2 - 0.00095 18.9 0.0 0.0012 18.6 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain UCR_Fe-S_N PF10399.9 NODE_76662_length_206_cov_1.269006_g68721_i0reverse_frame_3 - 0.091 12.1 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SHNi-TPR PF10516.9 NODE_76655_length_206_cov_1.315789_g68714_i0reverse_frame_3 - 0.13 11.7 0.4 0.17 11.4 0.4 1.2 1 0 0 1 1 1 0 SHNi-TPR zf-Paramyx-P PF13008.7 NODE_76652_length_206_cov_1.350877_g68711_i0reverse_frame_3 - 0.17 11.4 0.0 0.23 10.9 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding domain of Paramyxoviridae V protein MetW PF07021.12 NODE_76650_length_206_cov_1.374269_g68709_i0reverse_frame_3 - 0.07 12.7 0.1 0.07 12.7 0.1 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Tachystatin_A PF11406.8 NODE_76650_length_206_cov_1.374269_g68709_i0forward_frame_2 - 0.0059 16.7 2.9 0.013 15.5 2.9 1.6 1 1 0 1 1 1 1 Antimicrobial peptide tachystatin A HMG_box_5 PF14887.6 NODE_76649_length_206_cov_1.374269_g68708_i0reverse_frame_3 - 0.0082 16.1 0.0 0.01 15.8 0.0 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box 5 HCMV_UL139 PF12507.8 NODE_76648_length_206_cov_1.380117_g68707_i0forward_frame_3 - 0.17 12.3 0.5 0.22 11.9 0.5 1.1 1 0 0 1 1 1 0 Human Cytomegalovirus UL139 protein EF-hand_1 PF00036.32 NODE_76639_length_206_cov_1.397661_g68698_i0forward_frame_2 - 0.0074 15.8 0.0 0.011 15.2 0.0 1.3 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 NODE_76639_length_206_cov_1.397661_g68698_i0forward_frame_2 - 0.053 13.5 0.0 0.069 13.1 0.0 1.3 1 1 0 1 1 1 0 EF-hand domain EF-hand_5 PF13202.6 NODE_76639_length_206_cov_1.397661_g68698_i0forward_frame_2 - 0.16 11.5 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 EF hand Phage_tail_U PF06141.11 NODE_76635_length_206_cov_1.397661_g68694_i0reverse_frame_2 - 0.062 13.7 0.1 0.071 13.5 0.1 1.1 1 0 0 1 1 1 0 Phage minor tail protein U ComJ PF11033.8 NODE_76634_length_206_cov_1.403509_g68693_i0reverse_frame_3 - 0.058 13.1 0.0 0.071 12.8 0.0 1.1 1 0 0 1 1 1 0 Competence protein J (ComJ) Porphobil_deam PF01379.20 NODE_76632_length_206_cov_1.403509_g68691_i0reverse_frame_2 - 2e-20 73.2 0.1 2.1e-20 73.1 0.1 1.0 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain PH_8 PF15409.6 NODE_76629_length_206_cov_1.403509_g68688_i0reverse_frame_2 - 0.0084 16.4 0.0 0.0095 16.2 0.0 1.1 1 0 0 1 1 1 1 Pleckstrin homology domain Bac_export_2 PF01312.19 NODE_76625_length_206_cov_1.409357_g68684_i0reverse_frame_3 - 0.17 11.0 0.3 0.19 10.9 0.3 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family LHC PF00556.20 NODE_76621_length_206_cov_1.438596_g68680_i0forward_frame_2 - 0.23 11.7 0.7 0.33 11.2 0.7 1.2 1 0 0 1 1 1 0 Antenna complex alpha/beta subunit EspB_PE PF18625.1 NODE_76620_length_206_cov_1.438596_g68679_i0reverse_frame_3 - 0.05 14.1 0.1 0.067 13.7 0.1 1.1 1 0 0 1 1 1 0 ESX-1 secreted protein B PE domain PMD PF10536.9 NODE_76620_length_206_cov_1.438596_g68679_i0forward_frame_2 - 0.055 12.6 0.0 0.055 12.6 0.0 1.0 1 0 0 1 1 1 0 Plant mobile domain Defensin_like PF10868.8 NODE_76612_length_206_cov_1.520468_g68671_i0forward_frame_3 - 0.0086 16.8 1.7 0.01 16.5 1.7 1.3 1 0 0 1 1 1 1 Cysteine-rich antifungal protein 2, defensin-like Inositol_P PF00459.25 NODE_76610_length_206_cov_1.526316_g68669_i0reverse_frame_2 - 4.5e-08 32.9 0.1 5.1e-08 32.7 0.1 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family DEAD PF00270.29 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 5.6e-09 36.0 0.1 6.2e-09 35.9 0.1 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase PhoH PF02562.16 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.0019 17.7 0.1 0.0021 17.6 0.1 1.0 1 0 0 1 1 1 1 PhoH-like protein ResIII PF04851.15 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.015 15.3 0.0 0.016 15.2 0.0 1.0 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit DnaB_C PF03796.15 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.027 13.8 0.0 0.028 13.7 0.0 1.0 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain T2SSE PF00437.20 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.086 11.9 0.0 0.096 11.7 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein IstB_IS21 PF01695.17 NODE_76608_length_206_cov_1.526316_g68667_i0reverse_frame_2 - 0.089 12.5 0.0 0.096 12.4 0.0 1.0 1 0 0 1 1 1 0 IstB-like ATP binding protein Dynamin_N PF00350.23 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.0062 16.6 0.2 0.011 15.8 0.0 1.5 2 0 0 2 2 2 1 Dynamin family MMR_HSR1 PF01926.23 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.014 15.5 0.1 0.029 14.5 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AIG1 PF04548.16 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.029 13.7 0.0 0.044 13.1 0.0 1.3 1 0 0 1 1 1 0 AIG1 family AAA_6 PF12774.7 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.093 11.7 0.1 0.097 11.6 0.1 1.0 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region DVL PF08137.12 NODE_76605_length_206_cov_1.538012_g68664_i0reverse_frame_3 - 0.13 12.1 0.4 0.19 11.6 0.4 1.2 1 0 0 1 1 1 0 DVL family Sulfatase PF00884.23 NODE_76604_length_206_cov_1.543860_g68663_i0reverse_frame_2 - 1.7e-10 40.8 0.0 1.7e-10 40.8 0.0 1.0 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 NODE_76604_length_206_cov_1.543860_g68663_i0reverse_frame_2 - 0.047 13.3 0.0 0.049 13.2 0.0 1.0 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF2688 PF10892.8 NODE_76594_length_206_cov_1.625731_g68653_i0reverse_frame_3 - 0.035 13.6 0.0 0.043 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) zf-C2H2 PF00096.26 NODE_76594_length_206_cov_1.625731_g68653_i0reverse_frame_3 - 0.45 11.1 7.3 0.64 10.6 7.3 1.2 1 0 0 1 1 1 0 Zinc finger, C2H2 type ArfGap PF01412.18 NODE_76594_length_206_cov_1.625731_g68653_i0reverse_frame_3 - 0.47 10.6 2.4 0.59 10.2 2.4 1.2 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf FTR PF01913.18 NODE_76594_length_206_cov_1.625731_g68653_i0forward_frame_2 - 0.1 12.5 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase Iron_permease PF04120.12 NODE_76593_length_206_cov_1.625731_g68652_i0forward_frame_3 - 0.13 12.0 2.9 0.17 11.6 2.9 1.3 1 0 0 1 1 1 0 Low affinity iron permease DUF5408 PF17402.2 NODE_76593_length_206_cov_1.625731_g68652_i0forward_frame_3 - 1.3 9.0 8.0 0.56 10.1 4.7 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5408) DUF1856 PF08983.10 NODE_76591_length_206_cov_1.631579_g68650_i0reverse_frame_2 - 0.2 11.9 6.5 0.51 10.6 6.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF1856) DUF5357 PF17310.2 NODE_76588_length_206_cov_1.637427_g68647_i0forward_frame_2 - 0.16 10.5 0.6 0.16 10.5 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) DUF5351 PF17302.2 NODE_76586_length_206_cov_1.649123_g68645_i0reverse_frame_2 - 0.073 13.3 0.8 0.15 12.3 0.8 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5351) RVT_1 PF00078.27 NODE_76585_length_206_cov_1.654971_g68644_i0forward_frame_2 - 0.014 14.9 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Antimicrobial21 PF14861.6 NODE_76581_length_206_cov_1.707602_g68640_i0reverse_frame_3 - 0.098 12.4 0.1 0.17 11.6 0.1 1.3 1 0 0 1 1 1 0 Plant antimicrobial peptide DUF2706 PF10913.8 NODE_76570_length_206_cov_1.789474_g68629_i0reverse_frame_3 - 0.33 10.8 1.5 0.48 10.3 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2706) NADHdh PF00146.21 NODE_76569_length_206_cov_1.818713_g68628_i0forward_frame_3 - 0.062 12.6 0.2 0.067 12.5 0.2 1.0 1 0 0 1 1 1 0 NADH dehydrogenase Sec31 PF11549.8 NODE_76568_length_206_cov_1.824561_g68627_i0reverse_frame_3 - 0.046 13.6 0.0 0.069 13.1 0.0 1.3 1 0 0 1 1 1 0 Protein transport protein SEC31 MOSC_N PF03476.16 NODE_76567_length_206_cov_1.824561_g68626_i0forward_frame_3 - 0.00014 21.7 0.0 0.00021 21.1 0.0 1.3 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain zf-MYND PF01753.18 NODE_76567_length_206_cov_1.824561_g68626_i0forward_frame_3 - 0.1 12.7 0.1 0.17 12.0 0.1 1.4 1 0 0 1 1 1 0 MYND finger RtcR PF06956.11 NODE_76560_length_206_cov_1.853801_g68619_i0reverse_frame_3 - 6.1e-25 87.7 0.0 6.6e-25 87.6 0.0 1.0 1 0 0 1 1 1 1 Regulator of RNA terminal phosphate cyclase ArAE_2 PF10334.9 NODE_76560_length_206_cov_1.853801_g68619_i0reverse_frame_3 - 0.11 12.4 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Aromatic acid exporter family member 2 CABS1 PF15367.6 NODE_76556_length_206_cov_1.859649_g68615_i0forward_frame_3 - 0.19 10.8 0.0 0.19 10.8 0.0 1.0 1 0 0 1 1 1 0 Calcium-binding and spermatid-specific protein 1 DUF5477 PF17571.2 NODE_76552_length_206_cov_1.865497_g68611_i0forward_frame_2 - 0.069 13.3 0.1 0.075 13.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5477) Gemini_mov PF01708.16 NODE_76550_length_206_cov_1.871345_g68609_i0forward_frame_2 - 0.13 12.1 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Geminivirus putative movement protein Say1_Mug180 PF10340.9 NODE_76548_length_206_cov_1.871345_g68607_i0reverse_frame_3 - 0.026 13.4 0.1 0.027 13.4 0.1 1.0 1 0 0 1 1 1 0 Steryl acetyl hydrolase PRIMA1 PF16101.5 NODE_76542_length_206_cov_1.906433_g68601_i0reverse_frame_2 - 0.76 9.8 7.2 1.1 9.3 7.2 1.5 1 1 0 1 1 1 0 Proline-rich membrane anchor 1 zf_C2H2_ZHX PF18387.1 NODE_76541_length_206_cov_1.912281_g68600_i0forward_frame_2 - 0.84 9.3 3.5 1.8 8.3 0.2 2.1 2 0 0 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain MtlR PF05068.12 NODE_76540_length_206_cov_1.912281_g68599_i0reverse_frame_2 - 0.00065 19.8 0.0 0.00073 19.6 0.0 1.1 1 0 0 1 1 1 1 Mannitol repressor DUF2518 PF10726.9 NODE_76540_length_206_cov_1.912281_g68599_i0forward_frame_3 - 0.046 13.4 0.1 0.046 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of function (DUF2518) CEP1-DNA_bind PF09287.10 NODE_76538_length_206_cov_1.959064_g68597_i0forward_frame_3 - 0.037 13.7 0.0 0.04 13.6 0.0 1.0 1 0 0 1 1 1 0 CEP-1, DNA binding ABC_tran PF00005.27 NODE_76538_length_206_cov_1.959064_g68597_i0forward_frame_2 - 0.00011 22.8 0.0 0.00015 22.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter DUF4825 PF16107.5 NODE_76537_length_206_cov_1.964912_g68596_i0reverse_frame_3 - 0.0028 17.8 0.0 0.0033 17.5 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4825) DUF2116 PF09889.9 NODE_76537_length_206_cov_1.964912_g68596_i0forward_frame_3 - 0.03 14.3 0.7 0.041 13.9 0.7 1.2 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF3989 PF13150.6 NODE_76536_length_206_cov_1.964912_g68595_i0reverse_frame_3 - 0.16 11.7 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) DUF2554 PF10829.8 NODE_76533_length_206_cov_2.011696_g68592_i0reverse_frame_2 - 0.031 14.7 0.0 0.034 14.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2554) Thymidylat_synt PF00303.19 NODE_76530_length_206_cov_2.029240_g68589_i0forward_frame_2 - 4e-11 42.6 0.2 4.7e-11 42.3 0.2 1.0 1 0 0 1 1 1 1 Thymidylate synthase Ost5 PF05251.12 NODE_76527_length_206_cov_2.040936_g68586_i0reverse_frame_2 - 0.072 13.4 0.2 0.11 12.8 0.1 1.4 2 0 0 2 2 2 0 Oligosaccharyltransferase subunit 5 Archease PF01951.16 NODE_76527_length_206_cov_2.040936_g68586_i0forward_frame_3 - 0.066 13.5 0.0 0.079 13.2 0.0 1.0 1 0 0 1 1 1 0 Archease protein family (MTH1598/TM1083) Phe_ZIP PF08916.11 NODE_76527_length_206_cov_2.040936_g68586_i0forward_frame_3 - 0.091 13.5 0.0 0.13 13.0 0.0 1.2 1 0 0 1 1 1 0 Phenylalanine zipper VESA1_N PF12785.7 NODE_76524_length_206_cov_2.058480_g68583_i0forward_frame_3 - 2.7 6.9 10.2 2.7 6.9 10.2 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 zf-NADH-PPase PF09297.11 NODE_76516_length_206_cov_2.093567_g68575_i0forward_frame_3 - 0.092 12.4 1.7 0.25 11.1 0.1 2.3 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain PPO1_DWL PF12142.8 NODE_76514_length_206_cov_2.146199_g68573_i0reverse_frame_3 - 0.061 13.1 0.1 0.26 11.1 0.0 1.9 2 0 0 2 2 2 0 Polyphenol oxidase middle domain Peptidase_S68 PF10461.9 NODE_76513_length_206_cov_2.146199_g68572_i0reverse_frame_2 - 0.057 13.6 0.1 0.1 12.8 0.1 1.4 1 0 0 1 1 1 0 Peptidase S68 Anti-TRAP PF15777.5 NODE_76509_length_206_cov_2.187135_g68568_i0forward_frame_3 - 0.06 13.3 0.4 0.098 12.6 0.4 1.3 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF1077 PF06417.12 NODE_76509_length_206_cov_2.187135_g68568_i0forward_frame_2 - 0.15 12.1 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) RRP14 PF15459.6 NODE_76508_length_206_cov_2.204678_g68567_i0reverse_frame_3 - 0.034 14.8 0.0 0.041 14.5 0.0 1.2 1 0 0 1 1 1 0 60S ribosome biogenesis protein Rrp14 PriX PF18689.1 NODE_76506_length_206_cov_2.216374_g68565_i0reverse_frame_2 - 0.033 14.5 0.2 0.038 14.3 0.2 1.1 1 0 0 1 1 1 0 Primase X EPOP PF15223.6 NODE_76505_length_206_cov_2.216374_g68564_i0reverse_frame_3 - 0.033 13.6 0.8 0.035 13.5 0.8 1.0 1 0 0 1 1 1 0 Elongin BC and Polycomb repressive complex 2-associated protein DUF4998 PF16389.5 NODE_76498_length_206_cov_2.292398_g68557_i0reverse_frame_2 - 0.14 11.8 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function GGDEF PF00990.21 NODE_76496_length_206_cov_2.298246_g68555_i0forward_frame_2 - 4.7e-23 81.7 0.4 5.1e-23 81.6 0.4 1.0 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain ParB_C PF18064.1 NODE_76495_length_206_cov_2.304094_g68554_i0forward_frame_3 - 0.14 12.4 0.0 0.2 11.9 0.0 1.2 1 0 0 1 1 1 0 Centromere-binding protein ParB C-terminal HTH_OrfB_IS605 PF12323.8 NODE_76494_length_206_cov_2.321637_g68553_i0forward_frame_3 - 0.044 13.3 0.1 0.089 12.3 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain CxC6 PF18721.1 NODE_76491_length_206_cov_2.339181_g68550_i0reverse_frame_3 - 2.5 8.5 14.8 0.28 11.5 9.8 1.9 2 1 1 3 3 3 0 CxC6 like cysteine cluster associated with KDZ transposases zf-CCHC_3 PF13917.6 NODE_76491_length_206_cov_2.339181_g68550_i0reverse_frame_2 - 0.81 9.7 7.2 9.7 6.3 0.0 2.6 2 1 0 2 2 2 0 Zinc knuckle Phage_tail_X PF05489.12 NODE_76491_length_206_cov_2.339181_g68550_i0forward_frame_3 - 0.19 11.4 0.2 0.26 11.0 0.2 1.2 1 0 0 1 1 1 0 Phage Tail Protein X Microcin PF03526.13 NODE_76487_length_206_cov_2.374269_g68546_i0forward_frame_3 - 0.098 12.5 0.1 0.15 11.9 0.1 1.3 1 0 0 1 1 1 0 Colicin E1 (microcin) immunity protein MCM PF00493.23 NODE_76486_length_206_cov_2.380117_g68545_i0reverse_frame_3 - 7.3e-13 48.1 0.0 8.1e-13 48.0 0.0 1.0 1 0 0 1 1 1 1 MCM P-loop domain BLUF PF04940.12 NODE_76486_length_206_cov_2.380117_g68545_i0reverse_frame_3 - 0.079 13.1 0.1 0.16 12.1 0.1 1.6 1 1 0 1 1 1 0 Sensors of blue-light using FAD Siah-Interact_N PF09032.11 NODE_76486_length_206_cov_2.380117_g68545_i0reverse_frame_3 - 0.08 13.3 0.4 0.1 12.9 0.4 1.2 1 0 0 1 1 1 0 Siah interacting protein, N terminal T2SSppdC PF12528.8 NODE_76485_length_206_cov_2.385965_g68544_i0reverse_frame_2 - 0.034 14.9 0.4 0.042 14.6 0.4 1.3 1 1 0 1 1 1 0 Type II secretion prepilin peptidase dependent protein C Toxin_TOLIP PF00087.21 NODE_76482_length_206_cov_2.450292_g68541_i0reverse_frame_2 - 0.58 10.5 8.8 3.1 8.1 1.7 2.2 1 1 1 2 2 2 0 Snake toxin and toxin-like protein MSG PF02349.15 NODE_76482_length_206_cov_2.450292_g68541_i0reverse_frame_2 - 3.4 7.9 9.3 12 6.2 9.3 1.8 1 1 0 1 1 1 0 Major surface glycoprotein TMEM43 PF07787.12 NODE_76482_length_206_cov_2.450292_g68541_i0forward_frame_2 - 0.42 10.0 1.8 0.44 9.9 1.8 1.0 1 0 0 1 1 1 0 Transmembrane protein 43 DUF4235 PF14019.6 NODE_76481_length_206_cov_2.456140_g68540_i0reverse_frame_2 - 0.029 14.4 0.2 1.4 9.1 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4235) B12D PF06522.11 NODE_76481_length_206_cov_2.456140_g68540_i0reverse_frame_2 - 0.19 11.6 0.7 0.28 11.0 0.7 1.2 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Gemini_mov PF01708.16 NODE_76479_length_206_cov_2.473684_g68538_i0forward_frame_3 - 1.2 8.9 3.8 1.5 8.6 3.8 1.1 1 0 0 1 1 1 0 Geminivirus putative movement protein CG-1 PF03859.16 NODE_76478_length_206_cov_2.497076_g68537_i0forward_frame_2 - 0.032 14.0 0.0 0.036 13.8 0.0 1.1 1 0 0 1 1 1 0 CG-1 domain APC_u15 PF16636.5 NODE_76473_length_206_cov_2.538012_g68532_i0reverse_frame_3 - 0.2 12.1 2.1 0.22 12.0 2.1 1.1 1 0 0 1 1 1 0 Unstructured region on APC between APC_crr regions 5 and 6 4HBT_2 PF13279.6 NODE_76472_length_206_cov_2.561404_g68531_i0reverse_frame_3 - 0.019 15.4 0.2 0.019 15.4 0.2 1.0 1 0 0 1 1 1 0 Thioesterase-like superfamily DUF423 PF04241.15 NODE_76471_length_206_cov_2.567251_g68530_i0reverse_frame_2 - 0.98 9.7 3.7 1.1 9.5 3.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF423) DnaJ_CXXCXGXG PF00684.19 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 3.8e-05 24.0 9.1 4.9e-05 23.6 9.1 1.2 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 0.0012 18.8 1.7 0.0016 18.3 1.7 1.3 1 0 0 1 1 1 1 Tryptophan RNA-binding attenuator protein inhibitory protein HypA PF01155.19 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 0.033 14.2 0.1 0.033 14.2 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DnaJ_C PF01556.18 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 0.044 13.9 0.0 0.045 13.8 0.0 1.1 1 0 0 1 1 1 0 DnaJ C terminal domain DUF5351 PF17302.2 NODE_76470_length_206_cov_2.584795_g68529_i0reverse_frame_2 - 0.75 10.0 7.8 2.9 8.1 0.7 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5351) VPS13_C PF16909.5 NODE_76467_length_206_cov_2.643275_g68526_i0reverse_frame_3 - 0.16 11.7 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Vacuolar-sorting-associated 13 protein C-terminal FTHFS PF01268.19 NODE_76467_length_206_cov_2.643275_g68526_i0forward_frame_2 - 7.4e-28 97.1 0.0 7.9e-28 97.0 0.0 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase BRX_N PF13713.6 NODE_76467_length_206_cov_2.643275_g68526_i0forward_frame_2 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Transcription factor BRX N-terminal domain DUF3956 PF13104.6 NODE_76465_length_206_cov_2.695906_g68524_i0reverse_frame_3 - 0.14 12.4 0.1 0.3 11.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3956) Dimerisation2 PF16864.5 NODE_76463_length_206_cov_2.707602_g68522_i0reverse_frame_2 - 0.078 13.0 0.0 0.08 12.9 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain DUF349 PF03993.12 NODE_76463_length_206_cov_2.707602_g68522_i0forward_frame_2 - 0.0021 18.3 4.2 0.0022 18.2 4.2 1.1 1 0 0 1 1 1 1 Domain of Unknown Function (DUF349) Dickkopf_N PF04706.12 NODE_76460_length_206_cov_2.730994_g68519_i0reverse_frame_2 - 1.9 9.0 10.2 2.5 8.6 10.2 1.2 1 0 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region GAGA PF09237.11 NODE_76454_length_206_cov_2.894737_g68513_i0reverse_frame_3 - 0.04 13.7 0.2 0.052 13.4 0.2 1.2 1 0 0 1 1 1 0 GAGA factor RRN9 PF10680.9 NODE_76453_length_206_cov_2.906433_g68512_i0forward_frame_3 - 0.052 13.8 0.4 0.063 13.6 0.4 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor ILVD_EDD PF00920.21 NODE_76453_length_206_cov_2.906433_g68512_i0forward_frame_2 - 4e-14 52.1 0.0 4.2e-14 52.1 0.0 1.0 1 0 0 1 1 1 1 Dehydratase family Baculo_PEP_C PF04513.12 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.0015 18.6 2.2 0.0017 18.4 2.2 1.0 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus CdvA PF18822.1 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.015 15.2 5.4 0.17 11.7 1.4 2.0 1 1 1 2 2 2 0 CdvA-like coiled-coil domain SKA2 PF16740.5 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.021 14.6 1.7 0.028 14.2 1.5 1.2 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 2 KxDL PF10241.9 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.046 14.0 3.3 0.058 13.7 3.3 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein MbeB_N PF04837.12 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.061 13.6 1.7 0.46 10.8 0.6 2.3 1 1 1 2 2 2 0 MbeB-like, N-term conserved region KIP1 PF07765.12 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.061 13.4 4.7 0.059 13.5 3.0 1.7 1 1 1 2 2 2 0 KIP1-like protein Snf7 PF03357.21 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.073 12.7 3.8 0.08 12.5 3.8 1.0 1 0 0 1 1 1 0 Snf7 Cep57_CLD_2 PF14197.6 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.084 13.0 4.6 0.12 12.5 4.6 1.2 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 HBB PF06777.11 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.086 12.5 0.7 0.1 12.3 0.7 1.0 1 0 0 1 1 1 0 Helical and beta-bridge domain IMD PF08397.11 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.086 12.2 2.5 0.095 12.1 2.5 1.0 1 0 0 1 1 1 0 IRSp53/MIM homology domain Syntaxin-6_N PF09177.11 NODE_76451_length_206_cov_3.023392_g68510_i0reverse_frame_2 - 0.086 13.4 1.1 0.095 13.3 1.1 1.1 1 0 0 1 1 1 0 Syntaxin 6, N-terminal RAD51_interact PF15696.5 NODE_76449_length_206_cov_3.274854_g68508_i0forward_frame_2 - 0.099 12.8 0.2 0.16 12.1 0.2 1.3 1 0 0 1 1 1 0 RAD51 interacting motif DUF4866 PF16160.5 NODE_76442_length_206_cov_3.766082_g68501_i0reverse_frame_3 - 0.062 12.6 0.0 0.069 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4866) SBP PF03110.14 NODE_76442_length_206_cov_3.766082_g68501_i0forward_frame_2 - 0.012 15.9 0.1 0.013 15.8 0.1 1.1 1 0 0 1 1 1 0 SBP domain TPP_enzyme_C PF02775.21 NODE_76442_length_206_cov_3.766082_g68501_i0forward_frame_2 - 0.13 12.1 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DUF5605 PF18310.1 NODE_76441_length_206_cov_3.771930_g68500_i0forward_frame_2 - 0.078 12.9 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5605) DUF1774 PF08611.10 NODE_76440_length_206_cov_3.935673_g68499_i0reverse_frame_2 - 0.097 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1774) Fic_N PF13784.6 NODE_76440_length_206_cov_3.935673_g68499_i0forward_frame_3 - 0.092 12.8 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Fic/DOC family N-terminal TPP_enzyme_N PF02776.18 NODE_76439_length_206_cov_4.128655_g68498_i0forward_frame_2 - 0.027 14.1 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DUF5516 PF17637.2 NODE_76437_length_206_cov_4.473684_g68496_i0forward_frame_3 - 0.012 15.4 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5516) Epiglycanin_TR PF05647.11 NODE_76436_length_206_cov_4.947368_g68495_i0forward_frame_3 - 0.029 14.3 4.6 0.035 14.0 4.6 1.2 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like Phospholamban PF04272.14 NODE_76434_length_206_cov_7.736842_g68493_i0forward_frame_3 - 0.068 12.7 0.1 0.068 12.7 0.1 2.3 3 0 0 3 3 3 0 Phospholamban TMEM132D_C PF15706.5 NODE_76434_length_206_cov_7.736842_g68493_i0forward_frame_2 - 0.3 10.9 1.1 0.31 10.8 1.1 1.1 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF5499 PF17603.2 NODE_76432_length_206_cov_8.403509_g68491_i0forward_frame_2 - 0.024 15.3 0.6 0.032 14.8 0.5 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5499) YtpI PF14007.6 NODE_76426_length_206_cov_20.602339_g68485_i0forward_frame_3 - 0.94 9.7 6.8 1.6 8.9 6.8 1.3 1 0 0 1 1 1 0 YtpI-like protein FAM209 PF15206.6 NODE_76425_length_206_cov_21.046784_g68484_i0reverse_frame_2 - 0.22 11.3 0.0 0.24 11.2 0.0 1.0 1 0 0 1 1 1 0 FAM209 family Ribosomal_L23eN PF03939.13 NODE_76421_length_206_cov_28.163743_g68480_i0reverse_frame_3 - 0.09 13.0 0.2 0.12 12.6 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain PPL4 PF18188.1 NODE_76421_length_206_cov_28.163743_g68480_i0reverse_frame_2 - 0.1 12.5 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Prim-pol 4 NADHdh-2_N PF12155.8 NODE_76420_length_206_cov_29.461988_g68479_i0forward_frame_3 - 0.14 12.5 0.1 0.2 12.0 0.1 1.2 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 N-terminal Pacifastin_I PF05375.13 NODE_76419_length_206_cov_30.871345_g68478_i0forward_frame_2 - 0.014 15.1 1.9 0.024 14.3 1.9 1.4 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) MTBP_N PF14918.6 NODE_76417_length_206_cov_32.421053_g68476_i0reverse_frame_2 - 0.028 13.9 0.1 0.028 13.9 0.1 1.1 1 0 0 1 1 1 0 MDM2-binding ESM4 PF15952.5 NODE_76417_length_206_cov_32.421053_g68476_i0reverse_frame_2 - 0.052 14.0 4.3 0.057 13.9 4.3 1.0 1 0 0 1 1 1 0 Enhancer of split M4 family DmpG_comm PF07836.11 NODE_76415_length_206_cov_33.116959_g68474_i0forward_frame_2 - 0.061 12.9 0.0 0.072 12.6 0.0 1.1 1 0 0 1 1 1 0 DmpG-like communication domain UvrD_C_2 PF13538.6 NODE_76413_length_206_cov_35.432749_g68472_i0forward_frame_3 - 0.092 12.6 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain YMF19 PF02326.15 NODE_76411_length_206_cov_36.175439_g68470_i0reverse_frame_2 - 0.039 14.7 0.1 0.042 14.6 0.1 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 DUF2742 PF10888.8 NODE_76411_length_206_cov_36.175439_g68470_i0forward_frame_2 - 0.13 12.5 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2742) DUF2393 PF09624.10 NODE_76409_length_206_cov_37.070175_g68468_i0forward_frame_2 - 1.3 9.0 4.6 1.3 9.0 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) Cyt_c_ox_IV PF12270.8 NODE_76408_length_206_cov_38.081871_g68467_i0reverse_frame_2 - 0.19 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV UCH PF00443.29 NODE_76407_length_206_cov_38.742690_g68466_i0reverse_frame_2 - 6.4e-07 29.1 0.6 7e-07 29.0 0.6 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase NAC PF01849.18 NODE_76407_length_206_cov_38.742690_g68466_i0reverse_frame_2 - 0.069 13.1 0.0 0.093 12.7 0.0 1.2 1 0 0 1 1 1 0 NAC domain CW_binding_1 PF01473.20 NODE_76407_length_206_cov_38.742690_g68466_i0reverse_frame_2 - 0.13 12.6 2.7 0.23 11.9 2.7 1.4 1 0 0 1 1 1 0 Putative cell wall binding repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks399.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks399.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks399.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks399.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:42:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L27A PF00828.19 ORF7458 - 2.2e-10 41.3 0.0 3.7e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF7458 - 0.14 11.6 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e IBR PF01485.21 ORF68430 - 2.3e-07 31.0 8.2 2.3e-07 31.0 8.2 1.8 2 0 0 2 2 2 1 IBR domain, a half RING-finger domain WBP-1 PF11669.8 ORF68430 - 0.0044 17.6 3.6 0.047 14.3 2.8 2.7 2 0 0 2 2 2 1 WW domain-binding protein 1 HTH_54 PF18607.1 ORF64954 - 0.081 13.0 2.2 8.1 6.6 0.0 2.9 2 2 0 2 2 2 0 ParA helix turn helix domain TRP PF06011.12 ORF51712 - 0.00041 19.2 30.1 0.0027 16.5 30.1 1.9 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel Syndecan PF01034.20 ORF51712 - 0.33 10.9 0.0 0.33 10.9 0.0 3.8 5 0 0 5 5 5 0 Syndecan domain ECSCR PF15820.5 ORF51712 - 2.1 8.2 16.8 3.8 7.4 0.8 3.7 2 1 1 3 3 3 0 Endothelial cell-specific chemotaxis regulator zf-RING_2 PF13639.6 ORF49317 - 6.9e-13 48.7 6.3 1.4e-12 47.7 6.3 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF49317 - 7.2e-09 35.2 2.3 7.2e-09 35.2 2.3 2.0 2 0 0 2 2 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF49317 - 1.4e-08 34.9 4.3 3.6e-08 33.5 4.3 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF49317 - 5.8e-08 32.5 6.9 1.2e-07 31.5 6.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF49317 - 8.9e-07 28.9 2.6 3.1e-06 27.2 2.6 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 ORF49317 - 1e-06 28.4 5.6 1e-06 28.4 5.6 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF49317 - 1.7e-06 27.9 5.7 3.8e-06 26.8 5.7 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF49317 - 7e-05 22.7 5.8 0.00015 21.7 5.8 1.6 1 0 0 1 1 1 1 zinc-RING finger domain RINGv PF12906.7 ORF49317 - 7.2e-05 22.8 5.7 0.00016 21.7 5.7 1.6 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF49317 - 0.00011 22.3 3.7 0.00028 21.0 3.7 1.7 1 0 0 1 1 1 1 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 ORF49317 - 0.0019 18.0 3.6 0.0041 16.9 3.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF49317 - 0.0024 18.0 3.6 0.006 16.7 3.6 1.8 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Zn_ribbon_17 PF17120.5 ORF49317 - 0.0066 16.1 5.2 0.02 14.5 5.2 1.8 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-Nse PF11789.8 ORF49317 - 0.029 14.2 3.1 0.062 13.1 3.1 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Prok-RING_4 PF14447.6 ORF49317 - 0.096 12.6 3.3 0.24 11.3 3.4 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 Prok-RING_1 PF14446.6 ORF49317 - 0.1 12.5 5.1 0.55 10.2 1.4 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 PHD PF00628.29 ORF49317 - 0.2 11.6 7.1 0.25 11.3 6.0 1.8 2 0 0 2 2 2 0 PHD-finger zf-RING_4 PF14570.6 ORF49317 - 0.62 9.9 4.8 1.2 8.9 4.8 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Arginase PF00491.21 ORF46407 - 3.6e-13 49.7 0.0 5.4e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 Arginase family Arteri_nucleo PF01481.16 ORF44256 - 0.036 14.4 0.0 0.074 13.4 0.0 1.5 1 0 0 1 1 1 0 Arterivirus nucleocapsid protein Gln-synt_C PF00120.24 ORF37598 - 2.6e-16 59.6 0.0 2.5e-10 39.9 0.0 2.0 2 0 0 2 2 2 2 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 ORF37598 - 5.3e-09 35.7 0.0 1e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Dickkopf_N PF04706.12 ORF37116 - 2.7e-05 24.6 9.0 2.7e-05 24.6 9.0 5.5 6 0 0 6 6 6 1 Dickkopf N-terminal cysteine-rich region Abhydrolase_1 PF00561.20 ORF37005 - 7.2e-17 61.9 0.0 1.1e-16 61.2 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF37005 - 6.2e-13 48.6 0.0 1.9e-12 47.0 0.0 1.7 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF37005 - 1.8e-12 48.4 0.0 3.2e-12 47.5 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 ORF37005 - 0.00021 20.9 0.0 0.00037 20.1 0.0 1.4 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase Chlorophyllase2 PF12740.7 ORF37005 - 0.014 14.3 0.1 0.15 10.9 0.0 2.2 2 1 0 2 2 2 0 Chlorophyllase enzyme Ser_hydrolase PF06821.13 ORF37005 - 0.21 11.5 0.0 0.32 10.8 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase Fe-ADH PF00465.19 ORF34322 - 1.4e-92 310.3 0.1 1.8e-92 310.0 0.1 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 ORF34322 - 1.6e-10 41.1 0.2 3.2e-06 27.0 0.0 2.3 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 ORF34322 - 0.0084 15.3 0.1 0.42 9.7 0.0 2.6 2 0 0 2 2 2 1 3-dehydroquinate synthase Mg_trans_NIPA PF05653.14 ORF33950 - 1.1e-11 44.3 13.8 3.9e-06 26.2 3.8 2.7 2 1 1 3 3 3 2 Magnesium transporter NIPA EamA PF00892.20 ORF33950 - 2.9e-05 24.3 2.7 2.9e-05 24.3 2.7 4.5 3 2 2 5 5 5 2 EamA-like transporter family UAA PF08449.11 ORF33950 - 0.00033 20.0 10.1 0.071 12.3 0.6 2.6 2 1 1 3 3 3 2 UAA transporter family PUNUT PF16913.5 ORF33950 - 0.0065 15.7 3.6 0.0065 15.7 3.6 2.0 3 0 0 3 3 3 1 Purine nucleobase transmembrane transport Sugar_transport PF06800.12 ORF33950 - 0.045 13.1 5.3 0.05 12.9 1.3 2.5 2 1 0 2 2 2 0 Sugar transport protein DUF5325 PF17259.2 ORF33950 - 5.7 6.9 8.6 17 5.4 0.0 3.6 3 0 0 3 3 3 0 Family of unknown function (DUF5325) Gln-synt_C PF00120.24 ORF24568 - 1.2e-16 60.7 0.0 5.8e-15 55.1 0.0 2.0 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Usher PF00577.20 ORF17625 - 4.6e-85 286.5 10.0 5.3e-85 286.3 10.0 1.0 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF17625 - 1.8e-18 66.1 0.1 9.9e-18 63.7 0.0 2.2 2 0 0 2 2 2 1 PapC C-terminal domain Mg_trans_NIPA PF05653.14 ORF152397 - 1.1e-11 44.3 13.8 3.9e-06 26.2 3.8 2.7 2 1 1 3 3 3 2 Magnesium transporter NIPA EamA PF00892.20 ORF152397 - 2.9e-05 24.3 2.7 2.9e-05 24.3 2.7 4.5 3 2 2 5 5 5 2 EamA-like transporter family UAA PF08449.11 ORF152397 - 0.00033 20.0 10.1 0.071 12.3 0.6 2.6 2 1 1 3 3 3 2 UAA transporter family PUNUT PF16913.5 ORF152397 - 0.0065 15.7 3.6 0.0065 15.7 3.6 2.0 3 0 0 3 3 3 1 Purine nucleobase transmembrane transport Sugar_transport PF06800.12 ORF152397 - 0.045 13.1 5.3 0.05 12.9 1.3 2.5 2 1 0 2 2 2 0 Sugar transport protein DUF5325 PF17259.2 ORF152397 - 5.7 6.9 8.6 17 5.4 0.0 3.6 3 0 0 3 3 3 0 Family of unknown function (DUF5325) PGK PF00162.19 ORF150933 - 1.8e-139 464.9 0.4 2.1e-139 464.7 0.4 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Xan_ur_permease PF00860.20 ORF14998 - 1.2e-07 30.8 0.3 1.7e-07 30.3 0.3 1.1 1 0 0 1 1 1 1 Permease family P2_N PF18628.1 ORF148383 - 0.051 13.3 0.1 0.12 12.1 0.1 1.6 1 0 0 1 1 1 0 Viral coat protein P2 N-terminal domain Mg_trans_NIPA PF05653.14 ORF147977 - 1.7e-22 79.9 17.4 4.5e-15 55.5 5.9 2.1 2 0 0 2 2 2 2 Magnesium transporter NIPA EamA PF00892.20 ORF147977 - 0.005 17.0 6.6 0.005 17.0 6.6 3.5 3 1 0 3 3 3 1 EamA-like transporter family DctQ PF04290.12 ORF147977 - 0.022 14.7 0.2 0.022 14.7 0.2 3.4 4 0 0 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component TPR_1 PF00515.28 ORF14296 - 4.9e-25 86.3 3.2 3.7e-07 29.7 0.0 5.6 5 1 0 5 5 5 5 Tetratricopeptide repeat TPR_11 PF13414.6 ORF14296 - 1e-23 82.7 2.5 3.7e-11 42.5 0.0 4.9 3 1 2 5 5 5 3 TPR repeat TPR_2 PF07719.17 ORF14296 - 3.5e-20 70.4 0.3 0.0015 18.5 0.0 5.4 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF14296 - 1.6e-18 66.9 0.1 4.5e-08 33.5 0.0 4.3 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_17 PF13431.6 ORF14296 - 3.7e-15 55.1 8.7 0.00026 21.1 0.3 5.9 6 0 0 6 6 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF14296 - 7.9e-15 53.8 4.8 0.002 18.2 0.1 5.3 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF14296 - 7.2e-12 45.4 0.2 0.00035 20.8 0.0 3.6 2 2 2 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF14296 - 9.7e-11 42.1 0.0 2.4e-05 24.9 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF14296 - 1.6e-08 34.6 0.9 5.6e-05 23.3 0.2 2.6 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 ORF14296 - 4.2e-07 29.5 0.0 0.6 10.3 0.0 4.7 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF14296 - 1.2e-06 28.8 0.0 0.0094 16.7 0.0 4.2 3 1 2 5 5 5 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF14296 - 2.6e-06 27.1 0.8 3.2 7.8 0.1 4.6 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF14296 - 7.7e-05 23.1 0.0 0.84 10.4 0.0 3.7 4 0 0 4 4 4 2 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF14296 - 0.00034 20.1 1.2 0.48 9.8 0.1 2.4 1 1 1 2 2 2 2 Coatomer epsilon subunit NARP1 PF12569.8 ORF14296 - 0.0012 17.8 0.1 0.0036 16.3 0.0 1.8 1 1 1 2 2 2 1 NMDA receptor-regulated protein 1 DUF3573 PF12097.8 ORF14296 - 0.0013 17.7 0.2 0.0025 16.7 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3573) SHNi-TPR PF10516.9 ORF14296 - 0.0054 16.1 0.2 0.021 14.3 0.0 2.1 2 0 0 2 2 2 1 SHNi-TPR TPR_9 PF13371.6 ORF14296 - 0.011 15.9 0.0 5.4 7.2 0.0 3.1 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF14296 - 0.053 13.9 0.0 2.6 8.4 0.0 3.3 2 1 2 4 4 4 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF14296 - 0.06 13.4 0.0 0.79 9.8 0.0 2.6 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat Tubulin PF00091.25 ORF138338 - 6e-24 85.3 0.0 1e-23 84.6 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF138338 - 3.1e-13 50.0 0.0 3.2e-06 27.3 0.0 2.4 2 0 0 2 2 2 2 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF138338 - 0.013 15.2 0.1 0.33 10.6 0.0 2.3 2 0 0 2 2 2 0 Tubulin domain Tubulin_2 PF13809.6 ORF138338 - 0.092 11.9 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 Tubulin like Thiolase_N PF00108.23 ORF130039 - 5e-87 291.5 1.2 6.7e-87 291.1 1.2 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF130039 - 2.7e-49 165.9 0.3 2.7e-49 165.9 0.3 1.7 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 ORF130039 - 5e-06 26.3 0.8 5e-06 26.3 0.8 1.7 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 ORF130039 - 0.00022 21.0 0.5 0.057 13.3 0.1 2.5 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XdhC_C PF13478.6 ORF129725 - 5.9e-20 72.0 0.1 1.1e-19 71.2 0.1 1.5 1 0 0 1 1 1 1 XdhC Rossmann domain XdhC_CoxI PF02625.16 ORF129725 - 3.9e-18 65.4 2.7 8.1e-18 64.4 2.7 1.6 1 0 0 1 1 1 1 XdhC and CoxI family GrpE PF01025.19 ORF127103 - 3.9e-38 130.7 16.4 4.6e-37 127.2 15.8 2.5 1 1 0 1 1 1 1 GrpE CCDC-167 PF15188.6 ORF127103 - 0.044 14.1 5.8 0.15 12.4 5.8 1.9 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 YscO PF07321.12 ORF127103 - 0.087 12.8 9.7 0.032 14.2 5.9 2.2 2 0 0 2 2 2 0 Type III secretion protein YscO FAM76 PF16046.5 ORF127103 - 0.26 10.6 21.5 0.5 9.7 21.5 1.4 1 0 0 1 1 1 0 FAM76 protein FRB_dom PF08771.11 ORF127103 - 0.37 11.2 8.4 2.9 8.4 4.8 3.0 2 1 1 3 3 3 0 FKBP12-rapamycin binding domain DUF4407 PF14362.6 ORF127103 - 3.8 6.8 7.0 6.5 6.0 7.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) EamA PF00892.20 ORF125418 - 9.1e-12 45.3 31.8 8.1e-07 29.3 11.5 2.4 2 1 0 2 2 2 2 EamA-like transporter family Mg_trans_NIPA PF05653.14 ORF125418 - 1.6e-05 24.2 5.7 0.0022 17.2 2.3 2.4 2 0 0 2 2 2 2 Magnesium transporter NIPA Sugar_transport PF06800.12 ORF125418 - 0.069 12.5 16.4 0.024 14.0 11.3 2.4 2 1 1 3 3 3 0 Sugar transport protein Mg_trans_NIPA PF05653.14 ORF124618 - 1.7e-22 79.9 17.4 4.5e-15 55.5 5.9 2.1 2 0 0 2 2 2 2 Magnesium transporter NIPA EamA PF00892.20 ORF124618 - 0.005 17.0 6.6 0.005 17.0 6.6 3.5 3 1 0 3 3 3 1 EamA-like transporter family DctQ PF04290.12 ORF124618 - 0.022 14.7 0.2 0.022 14.7 0.2 3.4 4 0 0 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component Ribosomal_L27A PF00828.19 ORF122608 - 2.2e-10 41.3 0.0 3.7e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 ORF122608 - 0.14 11.6 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e ARL2_Bind_BART PF11527.8 ORF118965 - 1.8e-30 105.4 0.9 1.8e-30 105.4 0.9 2.4 2 1 0 2 2 2 1 The ARF-like 2 binding protein BART DUF3552 PF12072.8 ORF118965 - 0.0021 17.5 21.4 0.052 13.0 2.4 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF3552) DUF3435 PF11917.8 ORF118965 - 5.9 5.7 17.1 7.2 5.4 0.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3435) GSP_synth PF03738.14 ORF116552 - 1.3e-149 498.5 0.0 1.4e-149 498.4 0.0 1.0 1 0 0 1 1 1 1 Glutathionylspermidine synthase preATP-grasp Torus PF16131.5 ORF110856 - 5.5e-09 36.7 0.3 1.4e-08 35.4 0.3 1.7 1 0 0 1 1 1 1 Torus domain RRM_1 PF00076.22 ORF110856 - 1.1e-08 34.8 0.2 2.9e-08 33.4 0.2 1.8 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf_CCCH_4 PF18345.1 ORF110856 - 4.8e-07 29.6 4.2 1.6e-06 28.0 4.2 2.0 1 0 0 1 1 1 1 Zinc finger domain Nup35_RRM_2 PF14605.6 ORF110856 - 0.00031 20.7 0.0 0.00061 19.7 0.0 1.5 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif zf-CCCH_3 PF15663.5 ORF110856 - 0.00069 19.8 0.3 0.0022 18.2 0.3 1.8 1 0 0 1 1 1 1 Zinc-finger containing family RRM_3 PF08777.11 ORF110856 - 0.0012 18.8 0.1 0.0041 17.1 0.1 1.9 1 0 0 1 1 1 1 RNA binding motif zf-CCCH PF00642.24 ORF110856 - 0.0024 17.7 2.6 0.0024 17.7 2.6 2.5 3 0 0 3 3 3 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF110856 - 0.0045 16.8 4.0 0.0088 15.8 4.0 1.5 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_2 PF14608.6 ORF110856 - 0.03 14.8 3.3 0.089 13.3 3.3 1.9 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger RNA_bind PF08675.11 ORF110856 - 0.04 13.9 0.0 0.096 12.7 0.0 1.6 1 0 0 1 1 1 0 RNA binding domain Syntaxin_2 PF14523.6 ORF110856 - 0.36 11.2 0.0 0.36 11.2 0.0 2.5 3 0 0 3 3 3 0 Syntaxin-like protein Semialdhyde_dhC PF02774.18 ORF109980 - 6.9e-61 205.5 0.0 8.7e-61 205.2 0.0 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 ORF109980 - 5.1e-24 85.0 0.0 9.1e-24 84.2 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain MFS_1 PF07690.16 ORF109509 - 6.2e-18 64.8 24.6 2.6e-14 52.9 17.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily EF-hand_7 PF13499.6 ORF109360 - 6.4e-06 26.5 0.0 0.0052 17.2 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF109360 - 0.0018 18.0 0.0 27 5.0 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain CCD48 PF15799.5 ORF109360 - 0.22 9.8 2.0 0.44 8.8 0.0 2.2 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 48 Mg_trans_NIPA PF05653.14 ORF101504 - 1.7e-22 79.9 17.4 4.5e-15 55.5 5.9 2.1 2 0 0 2 2 2 2 Magnesium transporter NIPA EamA PF00892.20 ORF101504 - 0.005 17.0 6.6 0.005 17.0 6.6 3.5 3 1 0 3 3 3 1 EamA-like transporter family DctQ PF04290.12 ORF101504 - 0.022 14.7 0.2 0.022 14.7 0.2 3.4 4 0 0 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component Bestrophin PF01062.21 ORF99797 - 7.2e-10 38.7 0.3 1.2e-09 38.0 0.3 1.2 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Radial_spoke PF04712.12 ORF99010 - 1.2e-78 265.3 1.3 3.1e-61 207.8 1.3 2.0 1 1 1 2 2 2 2 Radial spokehead-like protein NDK PF00334.19 ORF9808 - 3.9e-73 243.8 0.0 5e-39 133.4 0.0 2.2 2 0 0 2 2 2 2 Nucleoside diphosphate kinase DUF1126 PF06565.12 ORF9808 - 9.4e-06 25.4 0.4 2.4e-05 24.1 0.4 1.7 1 0 0 1 1 1 1 DUF1126 PH-like domain SEP PF08059.13 ORF9808 - 0.067 13.8 0.0 23 5.6 0.0 2.5 2 0 0 2 2 2 0 SEP domain EamA PF00892.20 ORF96813 - 1e-21 77.5 29.6 1.9e-15 57.2 9.8 2.2 2 0 0 2 2 2 2 EamA-like transporter family DUF3611 PF12263.8 ORF96813 - 0.61 10.0 9.3 0.042 13.7 1.5 2.9 2 2 0 2 2 2 0 Protein of unknown function (DUF3611) DUF2070 PF09843.9 ORF96813 - 2.3 6.4 15.7 2.3 6.4 5.9 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) HCV_NS4a PF01006.20 ORF96813 - 7.6 6.4 7.4 0.66 9.8 0.3 2.7 2 0 0 2 2 2 0 Hepatitis C virus non-structural protein NS4a WES_acyltransf PF03007.16 ORF96743 - 2.7e-09 37.2 0.0 3.8e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 ORF96743 - 0.0078 14.9 0.0 0.011 14.4 0.0 1.2 1 0 0 1 1 1 1 Condensation domain DUF1406 PF07190.11 ORF96743 - 0.031 14.2 0.4 0.056 13.4 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1406) Cyclin_C PF02984.19 ORF89850 - 2.8e-07 30.6 0.0 2.8e-07 30.6 0.0 2.8 4 0 0 4 4 4 1 Cyclin, C-terminal domain eIF3g PF12353.8 ORF89850 - 3.6 8.0 19.4 0.11 12.9 5.9 3.5 1 1 2 3 3 3 0 Eukaryotic translation initiation factor 3 subunit G AIRS_C PF02769.22 ORF8176 - 3.8e-24 85.6 0.8 1.7e-23 83.4 0.8 2.0 1 1 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF8176 - 2.2e-20 73.1 0.2 5.9e-20 71.7 0.2 1.8 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Dynamin_M PF01031.20 ORF76614 - 6.8e-28 97.7 0.0 1.4e-27 96.6 0.0 1.5 2 0 0 2 2 2 1 Dynamin central region GED PF02212.18 ORF76614 - 1.5e-22 79.6 0.1 9.4e-22 77.0 0.0 2.1 2 0 0 2 2 2 1 Dynamin GTPase effector domain Cyclin_C PF02984.19 ORF69780 - 2.8e-07 30.6 0.0 2.8e-07 30.6 0.0 2.8 4 0 0 4 4 4 1 Cyclin, C-terminal domain eIF3g PF12353.8 ORF69780 - 3.6 8.0 19.4 0.11 12.9 5.9 3.5 1 1 2 3 3 3 0 Eukaryotic translation initiation factor 3 subunit G GTP_EFTU PF00009.27 ORF65808 - 4.7e-17 62.2 0.0 7.1e-17 61.6 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF65808 - 7.8e-07 29.4 1.3 2.7e-06 27.7 0.3 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 ORF65808 - 0.00034 20.9 0.0 0.001 19.3 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain RsgA_GTPase PF03193.16 ORF65808 - 0.0038 17.1 0.3 0.014 15.3 0.2 1.9 1 1 1 2 2 2 1 RsgA GTPase SNase PF00565.17 ORF62061 - 1.5e-19 70.4 0.2 1.8e-08 34.8 0.1 2.3 2 0 0 2 2 2 2 Staphylococcal nuclease homologue TUDOR PF00567.24 ORF62061 - 2.1e-19 69.7 0.0 6.7e-19 68.1 0.0 1.8 2 0 0 2 2 2 1 Tudor domain Agenet PF05641.12 ORF62061 - 0.022 15.2 0.5 0.4 11.2 0.0 3.0 4 0 0 4 4 4 0 Agenet domain SMN PF06003.12 ORF62061 - 0.059 12.6 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) RAP PF08373.10 ORF61341 - 5.8e-05 23.1 0.0 0.0001 22.3 0.0 1.4 1 0 0 1 1 1 1 RAP domain bZIP_1 PF00170.21 ORF49532 - 0.001 19.1 3.9 0.001 19.1 3.9 4.0 5 0 0 5 5 5 1 bZIP transcription factor Pil1 PF13805.6 ORF49532 - 0.0062 16.1 1.1 0.0062 16.1 1.1 2.6 2 1 0 2 2 2 1 Eisosome component PIL1 UPF0242 PF06785.11 ORF49532 - 0.029 14.5 1.0 0.029 14.5 1.0 3.2 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus Sugarporin_N PF11471.8 ORF49532 - 0.031 14.2 0.0 0.06 13.3 0.0 1.5 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension bZIP_2 PF07716.15 ORF49532 - 0.032 14.3 3.1 0.032 14.3 3.1 3.5 3 0 0 3 3 3 0 Basic region leucine zipper TRAF_BIRC3_bd PF16673.5 ORF49532 - 0.032 14.0 1.9 0.14 12.0 0.3 2.7 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain DUF4094 PF13334.6 ORF49532 - 0.39 11.2 4.2 0.17 12.3 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) MORN PF02493.20 ORF40599 - 2.4e-31 105.7 38.6 2.4e-06 27.1 1.0 9.1 9 0 0 9 9 9 8 MORN repeat EF1G PF00647.19 ORF37935 - 8.4e-30 103.0 0.1 2.6e-29 101.4 0.1 1.9 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_N PF02798.20 ORF37935 - 9.4e-10 38.7 0.0 2.2e-09 37.6 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF37935 - 5.3e-08 33.2 0.0 1.5e-07 31.7 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF37935 - 1.7e-07 31.4 0.5 6.1e-07 29.6 0.0 2.2 2 1 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF37935 - 6.5e-06 26.3 1.0 2.2e-05 24.5 0.0 2.4 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF37935 - 2.8e-05 24.1 0.0 6.5e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF37935 - 0.0068 16.7 0.0 0.024 15.0 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF37935 - 0.0074 17.0 0.0 0.018 15.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain GST_C_6 PF17171.4 ORF37935 - 0.016 15.0 0.0 0.054 13.3 0.0 2.0 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Lactate_perm PF02652.14 ORF37935 - 0.13 11.0 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 L-lactate permease OAD_gamma PF04277.13 ORF37935 - 1.1 9.9 2.4 2.1 9.0 2.4 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain CUE PF02845.16 ORF36955 - 1.7e-06 27.6 0.1 5.9e-06 25.9 0.1 2.0 1 0 0 1 1 1 1 CUE domain EF1G PF00647.19 ORF34733 - 1.6e-29 102.1 0.1 4.6e-29 100.6 0.1 1.8 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_N PF02798.20 ORF34733 - 9.6e-10 38.7 0.0 2.2e-09 37.6 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF34733 - 5.4e-08 33.1 0.0 1.5e-07 31.7 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF34733 - 1.7e-07 31.4 0.5 6.1e-07 29.6 0.0 2.2 2 1 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF34733 - 6.9e-06 26.2 1.0 2.2e-05 24.5 0.0 2.4 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF34733 - 2.9e-05 24.0 0.0 6.5e-05 22.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF34733 - 0.0069 16.7 0.0 0.024 15.0 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF34733 - 0.0074 17.0 0.0 0.018 15.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain GST_C_6 PF17171.4 ORF34733 - 0.018 14.8 0.0 0.054 13.3 0.0 1.9 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Lactate_perm PF02652.14 ORF34733 - 0.13 11.0 0.0 0.17 10.6 0.0 1.0 1 0 0 1 1 1 0 L-lactate permease GluRS_N PF18466.1 ORF34733 - 0.13 12.7 0.0 2.6 8.5 0.0 2.8 2 0 0 2 2 2 0 Glutamate--tRNA ligase N-terminal domain OAD_gamma PF04277.13 ORF34733 - 1.1 9.9 2.4 2.1 9.0 2.4 1.4 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Peptidase_C1 PF00112.23 ORF33593 - 1.7e-55 188.5 4.9 2.7e-55 187.8 4.9 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF33593 - 3.6e-13 49.7 7.2 3.6e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) GSP_synth PF03738.14 ORF20550 - 3.2e-162 540.0 0.2 3.6e-162 539.9 0.2 1.0 1 0 0 1 1 1 1 Glutathionylspermidine synthase preATP-grasp DUF4374 PF14298.6 ORF152472 - 0.11 11.3 0.0 0.18 10.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4374) PARP PF00644.20 ORF14973 - 1.1e-20 74.0 0.1 2.6e-20 72.9 0.1 1.6 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DsrC PF04358.13 ORF14973 - 0.1 13.1 0.1 0.19 12.3 0.1 1.4 1 0 0 1 1 1 0 DsrC like protein PCI PF01399.27 ORF148585 - 0.024 15.2 0.1 0.074 13.6 0.1 1.9 2 1 0 2 2 2 0 PCI domain Lectin_N PF03954.14 ORF141912 - 0.2 11.4 4.3 5.3 6.8 1.5 2.7 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain PIG-L PF02585.17 ORF141912 - 0.4 11.3 7.6 17 6.1 7.6 2.8 1 1 0 1 1 1 0 GlcNAc-PI de-N-acetylase IL2 PF00715.17 ORF141912 - 0.49 10.3 4.1 1.1 9.1 3.4 1.9 1 1 0 1 1 1 0 Interleukin 2 DUF4407 PF14362.6 ORF141912 - 0.71 9.2 14.7 0.094 12.1 8.2 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4407) MbeD_MobD PF04899.12 ORF141912 - 2.3 8.4 9.4 0.23 11.6 3.1 2.6 3 0 0 3 3 3 0 MbeD/MobD like DUF1003 PF06210.11 ORF141912 - 4.3 7.5 5.6 3.8 7.7 0.3 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1003) Sugar_tr PF00083.24 ORF140468 - 1.6e-73 248.1 16.7 1.8e-73 248.0 16.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF140468 - 4.9e-15 55.3 15.6 4.9e-15 55.3 15.6 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily UPF0139 PF03669.13 ORF140468 - 0.12 12.2 0.4 0.77 9.7 0.3 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0139) Phage_fiber_C PF06820.12 ORF139036 - 0.18 12.1 0.0 0.42 11.0 0.0 1.5 1 0 0 1 1 1 0 Putative prophage tail fibre C-terminus Glyco_hydro_7 PF00840.20 ORF138908 - 1.2e-05 24.3 21.6 0.01 14.6 0.1 4.4 2 1 2 4 4 4 3 Glycosyl hydrolase family 7 DUF4374 PF14298.6 ORF138860 - 0.11 11.3 0.0 0.18 10.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4374) Yip1 PF04893.17 ORF13317 - 3.1 7.5 11.9 0.4 10.4 6.0 2.3 2 1 1 3 3 3 0 Yip1 domain Cytochrome-c551 PF10643.9 ORF12314 - 0.005 16.4 0.6 0.0085 15.7 0.6 1.3 1 0 0 1 1 1 1 Photosystem P840 reaction-centre cytochrome c-551 FixQ PF05545.11 ORF12314 - 3.6 7.6 6.1 2.7 8.0 0.2 2.5 1 1 1 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ GTP_EFTU PF00009.27 ORF122533 - 4.7e-17 62.2 0.0 7.1e-17 61.6 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF122533 - 7.8e-07 29.4 1.3 2.7e-06 27.7 0.3 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 ORF122533 - 0.00034 20.9 0.0 0.001 19.3 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain RsgA_GTPase PF03193.16 ORF122533 - 0.0038 17.1 0.3 0.014 15.3 0.2 1.9 1 1 1 2 2 2 1 RsgA GTPase Amidohydro_3 PF07969.11 ORF121272 - 2.1e-14 53.8 2.4 6.1e-12 45.7 0.4 2.5 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 ORF121272 - 2.2e-09 37.1 1.2 4.1e-08 32.9 1.2 2.4 1 1 0 1 1 1 1 Amidohydrolase family Hum_adeno_E3A PF05393.11 ORF110170 - 0.0092 15.9 0.1 0.025 14.6 0.1 1.8 1 0 0 1 1 1 1 Human adenovirus early E3A glycoprotein Peptidase_C1 PF00112.23 ORF108733 - 1.6e-55 188.5 4.9 2.7e-55 187.8 4.9 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF108733 - 3.6e-13 49.7 7.2 3.6e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 ORF103017 - 1.3e-55 188.9 4.6 2.1e-55 188.2 4.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF103017 - 3.6e-13 49.7 7.2 3.6e-13 49.7 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF641 PF04859.12 ORF98459 - 6.2 7.2 17.2 0.12 12.7 3.9 2.8 3 0 0 3 3 3 0 Plant protein of unknown function (DUF641) Dynein_C PF18199.1 ORF98309 - 3.2e-79 266.4 0.5 4e-79 266.0 0.5 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF98309 - 1.9e-16 60.3 0.0 3.4e-16 59.5 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain zf-RING_2 PF13639.6 ORF92668 - 8.3e-12 45.3 9.8 8.3e-12 45.3 9.8 2.4 3 0 0 3 3 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF92668 - 7.8e-07 28.7 6.4 7.8e-07 28.7 6.4 2.5 3 0 0 3 3 3 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF92668 - 2.2e-06 27.8 7.3 2.2e-06 27.8 7.3 2.4 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF92668 - 0.00018 21.3 9.0 0.00065 19.5 9.0 2.0 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF92668 - 0.00027 20.7 5.9 0.00027 20.7 5.9 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF92668 - 0.00028 20.9 6.3 0.0011 19.0 6.3 2.1 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF92668 - 0.00047 20.1 8.4 0.00047 20.1 8.4 2.2 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF92668 - 0.0049 16.7 9.2 0.0049 16.7 9.2 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF92668 - 0.019 15.0 2.6 0.052 13.6 2.6 1.8 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF92668 - 0.15 11.7 7.0 0.43 10.2 7.0 1.8 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type DUF3938 PF13074.6 ORF92668 - 0.41 10.9 5.7 0.49 10.7 1.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3938) RINGv PF12906.7 ORF92668 - 0.96 9.6 9.7 2.9 8.1 9.7 1.9 1 0 0 1 1 1 0 RING-variant domain Acyl_transf_1 PF00698.21 ORF91586 - 1.2e-07 31.5 0.1 2.9e-07 30.3 0.1 1.5 1 1 1 2 2 2 1 Acyl transferase domain HlyD_D23 PF16576.5 ORF91342 - 1.2e-15 57.4 2.6 1.2e-14 54.0 2.6 2.5 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 ORF91342 - 3.1e-12 46.1 0.1 6.5e-08 32.3 0.0 3.0 2 0 0 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 ORF91342 - 1.7e-11 44.8 4.0 9.5e-08 32.7 0.2 3.3 3 1 0 3 3 3 2 HlyD family secretion protein HlyD PF00529.20 ORF91342 - 3.9e-11 42.7 1.5 6.9e-11 41.9 1.5 1.6 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS PTS_EIIA_1 PF00358.20 ORF91342 - 0.09 12.5 0.1 19 5.0 0.0 2.4 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MFS_1 PF07690.16 ORF84534 - 3.4e-17 62.4 20.4 6.3e-17 61.5 18.2 1.9 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_3 PF05977.13 ORF84534 - 0.073 11.5 3.9 1.2 7.4 0.2 2.4 1 1 1 2 2 2 0 Transmembrane secretion effector Calpain_III PF01067.22 ORF83894 - 0.0051 17.1 0.0 0.021 15.1 0.0 1.9 1 1 0 1 1 1 1 Calpain large subunit, domain III COX6B PF02297.17 ORF83894 - 1.1 9.5 3.0 5.9 7.2 0.5 2.3 2 0 0 2 2 2 0 Cytochrome oxidase c subunit VIb Sulfatase PF00884.23 ORF82306 - 2.8e-30 105.8 0.0 3.9e-30 105.3 0.0 1.1 1 0 0 1 1 1 1 Sulfatase DUF229 PF02995.17 ORF82306 - 6.7e-06 25.0 0.3 1e-05 24.4 0.0 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF229) DUF4976 PF16347.5 ORF82306 - 3.4e-05 24.0 0.0 0.022 15.0 0.1 2.4 2 1 0 2 2 2 2 Domain of unknown function (DUF4976) Phosphodiest PF01663.22 ORF82306 - 0.0047 16.6 0.0 0.0064 16.1 0.0 1.2 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase EII-Sor PF03609.14 ORF82102 - 9.8e-72 241.1 28.2 1.3e-71 240.8 28.2 1.1 1 0 0 1 1 1 1 PTS system sorbose-specific iic component DUF1737 PF08410.10 ORF73211 - 0.31 10.9 6.6 2.3 8.1 0.1 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF1737) NIF PF03031.18 ORF72209 - 2.3e-46 157.4 1.1 3.5e-46 156.8 0.5 1.6 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase TPR_12 PF13424.6 ORF68734 - 9.4e-13 48.3 10.6 2e-07 31.2 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat zf-RING_2 PF13639.6 ORF68734 - 3.8e-12 46.3 5.0 6.7e-12 45.5 5.0 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF68734 - 1.9e-08 33.9 2.3 5e-08 32.6 2.3 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF68734 - 3.7e-07 29.9 5.6 6.8e-07 29.1 5.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF68734 - 5.8e-07 29.4 2.1 1.2e-06 28.4 2.1 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF68734 - 8.7e-07 28.8 4.8 1.6e-06 28.0 4.8 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF68734 - 9.2e-07 29.1 4.9 3.7e-06 27.1 4.9 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF68734 - 9.4e-07 28.6 4.3 2e-06 27.5 4.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) TPR_MalT PF17874.1 ORF68734 - 9.7e-07 28.5 8.9 0.018 14.4 0.0 3.1 1 1 2 3 3 3 2 MalT-like TPR region TPR_7 PF13176.6 ORF68734 - 4.7e-06 26.3 1.5 0.43 10.7 0.1 4.8 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF68734 - 1.5e-05 24.7 11.3 1.4 9.3 0.0 5.4 6 0 0 6 6 4 2 Tetratricopeptide repeat zf-C3HC4_3 PF13920.6 ORF68734 - 1.6e-05 24.7 2.8 2.9e-05 23.8 2.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF68734 - 2.8e-05 24.1 2.2 9.8e-05 22.3 2.2 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger TPR_10 PF13374.6 ORF68734 - 7.2e-05 22.5 0.4 23 5.0 0.0 4.7 4 0 0 4 4 4 0 Tetratricopeptide repeat zf-RING_4 PF14570.6 ORF68734 - 0.00022 21.0 2.0 0.00049 19.8 2.0 1.6 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Zn_ribbon_17 PF17120.5 ORF68734 - 0.00071 19.1 3.1 0.0014 18.2 3.1 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF68734 - 0.0042 16.9 4.0 0.0096 15.8 4.0 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 TPR_1 PF00515.28 ORF68734 - 0.011 15.6 5.9 1.9 8.4 0.1 5.5 5 1 0 5 5 5 0 Tetratricopeptide repeat PHD PF00628.29 ORF68734 - 0.021 14.7 4.4 0.038 13.9 4.4 1.5 1 0 0 1 1 1 0 PHD-finger zf-Nse PF11789.8 ORF68734 - 0.038 13.8 1.0 0.078 12.8 1.0 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_4 PF15227.6 ORF68734 - 0.05 13.8 3.9 0.13 12.5 3.9 1.7 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING ComR_TPR PF18710.1 ORF68734 - 0.052 13.1 0.2 7.7 6.0 0.1 2.7 2 1 1 3 3 3 0 ComR tetratricopeptide DUF1186 PF06685.11 ORF68734 - 0.053 12.9 0.0 0.084 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1186) Tai4 PF16695.5 ORF68734 - 0.11 13.1 1.3 0.29 11.7 0.2 2.3 2 0 0 2 2 1 0 Type VI secretion system (T6SS), amidase immunity protein Prok-RING_1 PF14446.6 ORF68734 - 0.12 12.3 2.9 0.9 9.5 0.5 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 FANCL_C PF11793.8 ORF68734 - 0.15 12.3 4.4 0.43 10.8 4.4 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING-like PF08746.11 ORF68734 - 0.85 10.0 4.4 1.8 8.9 4.4 1.6 1 0 0 1 1 1 0 RING-like domain C1_1 PF00130.22 ORF68734 - 0.96 9.4 6.7 1.6 8.7 0.8 2.4 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) RINGv PF12906.7 ORF68734 - 1.7 8.9 5.5 3.4 7.9 5.5 1.6 1 0 0 1 1 1 0 RING-variant domain zf-C3H2C3 PF17122.5 ORF68734 - 4.8 7.3 7.3 26 5.0 7.3 2.3 1 1 0 1 1 1 0 Zinc-finger DUF456 PF04306.13 ORF68036 - 1.9 8.8 8.7 3.9 7.8 8.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF456) SM-ATX PF14438.6 ORF64771 - 0.051 13.7 0.4 0.12 12.5 0.4 1.6 1 0 0 1 1 1 0 Ataxin 2 SM domain PIG-X PF08320.12 ORF64771 - 0.051 13.5 0.1 0.086 12.7 0.1 1.3 1 0 0 1 1 1 0 PIG-X / PBN1 THF_DHG_CYH PF00763.23 ORF56580 - 0.0009 19.5 0.0 0.0019 18.5 0.0 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DUF3343 PF11823.8 ORF56580 - 0.052 13.0 0.2 0.72 9.3 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) PIG-X PF08320.12 ORF49298 - 0.051 13.5 0.1 0.086 12.7 0.1 1.3 1 0 0 1 1 1 0 PIG-X / PBN1 SM-ATX PF14438.6 ORF49298 - 0.054 13.6 0.4 0.12 12.5 0.4 1.6 1 0 0 1 1 1 0 Ataxin 2 SM domain ABC_tran PF00005.27 ORF47422 - 7.6e-32 110.7 0.0 1.4e-31 109.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF47422 - 2.7e-07 30.3 4.9 5.7e-06 25.9 4.9 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_membrane PF00664.23 ORF47422 - 0.00025 20.8 0.5 0.00033 20.4 0.5 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_16 PF13191.6 ORF47422 - 0.00056 20.3 0.0 0.0018 18.7 0.0 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 ORF47422 - 0.00057 20.3 0.8 0.079 13.4 0.8 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 ORF47422 - 0.0015 18.5 0.0 0.0032 17.4 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain SbcCD_C PF13558.6 ORF47422 - 0.0029 17.8 0.6 0.044 14.0 0.6 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 ORF47422 - 0.0033 17.7 0.0 0.22 11.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF47422 - 0.0046 16.7 2.9 0.0072 16.1 2.9 1.5 1 1 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 ORF47422 - 0.0049 16.2 0.1 0.13 11.5 0.0 2.2 2 0 0 2 2 2 1 Zeta toxin PRK PF00485.18 ORF47422 - 0.0087 15.8 0.0 0.014 15.1 0.0 1.5 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_29 PF13555.6 ORF47422 - 0.01 15.6 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 ORF47422 - 0.015 15.3 0.2 0.11 12.5 0.1 2.3 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF47422 - 0.016 15.2 0.1 4.4 7.3 0.0 2.5 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 ORF47422 - 0.021 14.8 0.5 1.1 9.1 0.0 2.2 2 0 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 ORF47422 - 0.04 13.8 0.0 0.092 12.7 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_18 PF13238.6 ORF47422 - 0.041 14.4 0.4 0.95 10.0 0.1 2.3 2 1 0 2 2 2 0 AAA domain AAA_21 PF13304.6 ORF47422 - 0.068 13.0 0.3 0.27 11.0 0.1 2.2 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system Med2 PF11214.8 ORF47422 - 0.1 12.7 1.8 0.21 11.7 0.4 2.0 2 0 0 2 2 2 0 Mediator complex subunit 2 MMR_HSR1 PF01926.23 ORF47422 - 0.15 12.2 0.1 0.39 10.8 0.0 1.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF47422 - 0.6 10.6 4.8 1.7 9.1 4.7 2.1 1 1 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 ORF44194 - 1e-12 48.0 0.0 1.4e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF44194 - 1.1e-06 28.9 0.0 3.1e-06 27.5 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 ORF44194 - 0.00045 20.5 0.0 0.0012 19.1 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D4 PF14578.6 ORF44194 - 0.028 14.3 0.2 0.11 12.4 0.1 2.1 2 1 0 2 2 2 0 Elongation factor Tu domain 4 CLN3 PF02487.17 ORF36071 - 0.3 10.1 2.0 0.55 9.2 2.0 1.4 1 0 0 1 1 1 0 CLN3 protein Macro PF01661.21 ORF35969 - 1.2e-17 64.1 0.1 3e-17 62.7 0.1 1.7 1 0 0 1 1 1 1 Macro domain zf-RING_2 PF13639.6 ORF33213 - 8.3e-12 45.3 9.8 8.3e-12 45.3 9.8 2.5 3 0 0 3 3 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF33213 - 7.8e-07 28.7 6.4 7.8e-07 28.7 6.4 2.5 3 0 0 3 3 3 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF33213 - 2.2e-06 27.8 7.3 2.2e-06 27.8 7.3 2.4 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF33213 - 0.00017 21.4 9.0 0.00065 19.5 9.0 2.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF33213 - 0.00027 20.7 5.9 0.00027 20.7 5.9 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF33213 - 0.00047 20.1 8.4 0.00047 20.1 8.4 2.3 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF33213 - 0.0011 19.0 6.3 0.0011 19.0 6.3 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF33213 - 0.0049 16.7 9.2 0.0049 16.7 9.2 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF33213 - 0.019 15.0 2.6 0.052 13.6 2.6 1.8 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger ICE2 PF08426.10 ORF33213 - 0.044 12.9 2.9 0.062 12.4 2.9 1.3 1 0 0 1 1 1 0 ICE2 Zn_ribbon_17 PF17120.5 ORF33213 - 0.15 11.7 7.0 0.43 10.2 7.0 1.8 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type DUF3938 PF13074.6 ORF33213 - 0.18 12.0 4.9 0.25 11.6 1.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3938) RINGv PF12906.7 ORF33213 - 0.96 9.6 9.7 2.9 8.1 9.7 1.9 1 0 0 1 1 1 0 RING-variant domain Attacin_C PF03769.15 ORF30727 - 0.0084 16.3 5.3 0.011 16.0 3.0 2.1 1 1 1 2 2 2 1 Attacin, C-terminal region TPR_15 PF13429.6 ORF2706 - 0.028 13.6 4.4 0.19 10.9 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF2706 - 0.064 14.1 0.5 0.064 14.1 0.5 3.6 2 1 2 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF2706 - 0.72 10.6 3.6 15 6.5 0.2 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat I_LWEQ PF01608.17 ORF243 - 0.025 14.8 0.1 0.04 14.2 0.1 1.3 1 0 0 1 1 1 0 I/LWEQ domain Aldo_ket_red PF00248.21 ORF24197 - 4.8e-68 229.5 0.0 5.8e-68 229.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family MORN PF02493.20 ORF2251 - 8.6e-18 63.1 41.7 0.00063 19.5 0.1 9.5 10 0 0 10 10 10 7 MORN repeat Pkinase PF00069.25 ORF18643 - 4.5e-65 219.7 2.2 7.2e-65 219.0 2.2 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18643 - 7e-29 100.9 0.4 1.5e-28 99.8 0.4 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 ORF18643 - 3.3e-16 57.5 5.6 3.3e-05 23.1 0.1 4.2 3 0 0 3 3 3 3 EF hand EF-hand_7 PF13499.6 ORF18643 - 1e-14 54.7 4.5 8e-10 39.0 0.1 3.2 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF18643 - 6.3e-10 38.2 8.9 0.0038 17.1 0.1 4.5 5 0 0 5 5 5 3 EF-hand domain Kinase-like PF14531.6 ORF18643 - 8.1e-10 38.5 0.1 3.3e-09 36.5 0.0 1.9 2 0 0 2 2 2 1 Kinase-like EF-hand_5 PF13202.6 ORF18643 - 3e-08 32.8 4.0 0.007 15.8 0.2 4.3 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF18643 - 8.6e-08 31.9 4.1 7.6e-05 22.5 0.0 3.4 3 1 1 4 4 4 2 EF-hand domain pair Pkinase_fungal PF17667.1 ORF18643 - 0.0012 17.7 0.8 0.0017 17.2 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF18643 - 0.0025 17.2 0.1 0.0049 16.2 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF18643 - 0.075 12.9 0.0 0.2 11.6 0.0 1.6 2 0 0 2 2 2 0 Phosphotransferase enzyme family Ion_trans_2 PF07885.16 ORF152464 - 0.12 12.4 0.2 0.26 11.3 0.2 1.6 1 0 0 1 1 1 0 Ion channel ABC_tran PF00005.27 ORF151734 - 7.6e-32 110.7 0.0 1.4e-31 109.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF151734 - 2.7e-07 30.3 4.9 5.7e-06 25.9 4.9 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain ABC_membrane PF00664.23 ORF151734 - 0.00025 20.8 0.5 0.00033 20.4 0.5 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_16 PF13191.6 ORF151734 - 0.00056 20.3 0.0 0.0018 18.7 0.0 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 ORF151734 - 0.00057 20.3 0.8 0.079 13.4 0.8 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 ORF151734 - 0.0015 18.5 0.0 0.0032 17.4 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain SbcCD_C PF13558.6 ORF151734 - 0.0029 17.8 0.6 0.044 14.0 0.6 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 ORF151734 - 0.0033 17.7 0.0 0.22 11.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF151734 - 0.0046 16.7 2.9 0.0072 16.1 2.9 1.5 1 1 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 ORF151734 - 0.0049 16.2 0.1 0.13 11.5 0.0 2.2 2 0 0 2 2 2 1 Zeta toxin PRK PF00485.18 ORF151734 - 0.0087 15.8 0.0 0.014 15.1 0.0 1.5 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_29 PF13555.6 ORF151734 - 0.01 15.6 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 ORF151734 - 0.015 15.3 0.2 0.11 12.5 0.1 2.3 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF151734 - 0.016 15.2 0.1 4.4 7.3 0.0 2.5 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 ORF151734 - 0.021 14.8 0.5 1.1 9.1 0.0 2.2 2 0 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 ORF151734 - 0.04 13.8 0.0 0.092 12.7 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_18 PF13238.6 ORF151734 - 0.041 14.4 0.4 0.95 10.0 0.1 2.3 2 1 0 2 2 2 0 AAA domain AAA_21 PF13304.6 ORF151734 - 0.068 13.0 0.3 0.27 11.0 0.1 2.2 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system Med2 PF11214.8 ORF151734 - 0.1 12.7 1.8 0.21 11.7 0.4 2.0 2 0 0 2 2 2 0 Mediator complex subunit 2 MMR_HSR1 PF01926.23 ORF151734 - 0.15 12.2 0.1 0.39 10.8 0.0 1.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF151734 - 0.6 10.6 4.8 1.7 9.1 4.7 2.1 1 1 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 ORF148120 - 1e-12 48.0 0.0 1.4e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF148120 - 1.1e-06 28.9 0.0 3.1e-06 27.5 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 ORF148120 - 0.00045 20.5 0.0 0.0012 19.1 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D4 PF14578.6 ORF148120 - 0.028 14.3 0.2 0.11 12.4 0.1 2.1 2 1 0 2 2 2 0 Elongation factor Tu domain 4 He_PIG PF05345.12 ORF139121 - 0.00061 19.9 2.1 0.0024 18.0 1.5 2.3 2 0 0 2 2 2 1 Putative Ig domain fn3_3 PF14686.6 ORF139121 - 0.028 14.2 1.4 0.092 12.5 1.4 1.9 1 0 0 1 1 1 0 Polysaccharide lyase family 4, domain II WD40 PF00400.32 ORF128001 - 4.1e-06 27.4 3.5 0.0015 19.3 0.0 4.4 4 0 0 4 4 4 1 WD domain, G-beta repeat Me-amine-dh_L PF02975.14 ORF128001 - 0.067 13.7 0.3 0.067 13.7 0.3 1.8 2 0 0 2 2 2 0 Methylamine dehydrogenase, L chain Diacid_rec PF05651.13 ORF117061 - 3.6e-49 165.9 0.3 5.2e-49 165.4 0.3 1.2 1 0 0 1 1 1 1 Putative sugar diacid recognition HTH_30 PF13556.6 ORF117061 - 4e-23 81.0 3.1 3.7e-22 77.9 2.5 2.4 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain GGDEF_2 PF17853.1 ORF117061 - 1e-19 70.9 0.0 2.4e-19 69.7 0.0 1.7 1 0 0 1 1 1 1 GGDEF-like domain GAF_2 PF13185.6 ORF117061 - 0.047 14.0 0.0 0.12 12.6 0.0 1.7 1 0 0 1 1 1 0 GAF domain Sugar_tr PF00083.24 ORF114030 - 1.7e-79 267.8 17.5 1.9e-79 267.6 17.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF114030 - 2.2e-13 49.8 13.9 2.2e-13 49.8 13.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF418 PF04235.12 ORF113639 - 3e-47 160.6 16.8 3e-47 160.6 16.8 2.5 2 1 1 3 3 3 1 Protein of unknown function (DUF418) Shisa PF13908.6 ORF100781 - 0.00017 21.9 4.8 0.00017 21.9 4.8 2.8 2 1 0 2 2 2 1 Wnt and FGF inhibitory regulator NS3_envE PF02723.14 ORF100781 - 0.033 14.3 0.8 0.033 14.3 0.8 1.9 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E DUF4834 PF16118.5 ORF100781 - 0.14 13.1 0.0 0.37 11.8 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Comm PF15957.5 ORF100781 - 0.35 11.2 3.7 1.1 9.6 0.2 2.6 3 0 0 3 3 3 0 Commissureless ADP_ribosyl_GH PF03747.14 ORF93276 - 2.5e-52 178.5 0.0 3.2e-52 178.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase MFS_1 PF07690.16 ORF88310 - 3e-27 95.5 24.7 2.7e-23 82.5 19.6 2.0 2 0 0 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF88310 - 2.5e-05 22.9 2.6 3.4e-05 22.5 2.6 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector Sugar_tr PF00083.24 ORF88310 - 0.00066 18.7 33.0 0.037 12.9 14.9 3.8 1 1 1 3 3 3 3 Sugar (and other) transporter PUCC PF03209.15 ORF88310 - 0.45 9.5 9.3 0.027 13.5 2.3 2.2 1 1 1 2 2 2 0 PUCC protein DDHD PF02862.17 ORF83969 - 2.4e-28 99.8 0.1 4.3e-19 69.6 0.0 2.2 1 1 1 2 2 2 2 DDHD domain DUF3089 PF11288.8 ORF83969 - 4.4e-06 26.4 0.0 8.3e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3089) Lipase_3 PF01764.25 ORF83969 - 7.4e-06 25.9 0.1 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF83969 - 0.024 13.9 0.3 0.1 11.9 0.1 1.9 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 ORF83969 - 0.048 13.5 0.1 5.2 6.8 0.0 2.3 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF83969 - 0.052 14.1 5.4 0.099 13.2 5.3 1.6 1 1 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF83969 - 0.088 12.4 0.3 2.2 7.9 0.0 2.3 3 0 0 3 3 3 0 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF83969 - 0.093 12.8 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Thioesterase domain WWE PF02825.20 ORF72996 - 0.058 14.0 0.1 1.5 9.5 0.1 2.7 2 1 0 2 2 2 0 WWE domain Aminotran_1_2 PF00155.21 ORF70794 - 3.6e-69 233.7 0.0 4.1e-69 233.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 ORF70794 - 2.1e-05 24.0 0.1 6.7e-05 22.3 0.1 2.0 3 1 0 3 3 3 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 ORF70794 - 0.00013 20.6 0.0 0.00021 20.0 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 ORF70794 - 0.0052 15.8 0.0 0.0099 14.9 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 ORF70794 - 0.0091 15.3 0.5 4.3 6.5 0.1 2.8 3 0 0 3 3 3 2 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 ORF70794 - 0.15 10.8 0.0 0.53 8.9 0.0 1.8 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain TraB PF01963.17 ORF64645 - 6.7e-05 22.9 0.0 0.00022 21.2 0.0 1.8 2 0 0 2 2 2 1 TraB family BPA_C PF18040.1 ORF61876 - 0.17 11.8 7.1 0.38 10.7 3.4 2.5 2 0 0 2 2 2 0 beta porphyranase A C-terminal PCI PF01399.27 ORF59214 - 2.6e-11 44.0 2.0 2.6e-11 44.0 2.0 2.3 2 1 0 2 2 2 1 PCI domain DUF3605 PF12239.8 ORF59214 - 0.0056 17.0 1.0 0.01 16.2 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3605) Shugoshin_N PF07558.11 ORF59214 - 3.1 7.7 11.1 10 6.1 0.0 3.3 4 0 0 4 4 4 0 Shugoshin N-terminal coiled-coil region MutS_III PF05192.18 ORF59214 - 9.5 6.4 8.0 7.8 6.7 2.9 2.3 1 1 0 2 2 2 0 MutS domain III Nuc_sug_transp PF04142.15 ORF5373 - 8.6e-15 54.7 14.1 1.2e-14 54.3 14.1 1.2 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF5373 - 0.0028 17.9 6.0 0.0028 17.9 6.0 2.3 2 0 0 2 2 2 1 EamA-like transporter family WWE PF02825.20 ORF53630 - 0.058 14.0 0.1 1.5 9.5 0.1 2.7 2 1 0 2 2 2 0 WWE domain BTB PF00651.31 ORF48948 - 9.2e-22 77.4 2.7 7.2e-21 74.5 0.4 2.5 1 1 1 2 2 2 1 BTB/POZ domain BACK PF07707.15 ORF48948 - 0.028 14.5 2.9 0.032 14.3 0.3 2.4 2 1 0 3 3 3 0 BTB And C-terminal Kelch Dickkopf_N PF04706.12 ORF48693 - 0.0031 18.0 14.8 0.0031 18.0 14.8 3.7 2 1 1 3 3 3 1 Dickkopf N-terminal cysteine-rich region EB PF01683.18 ORF48693 - 5.2 7.4 29.6 1.6 9.1 10.4 4.5 1 1 2 3 3 3 0 EB module Rtt106 PF08512.12 ORF45367 - 5.8e-23 81.1 0.1 1.2e-22 80.1 0.1 1.6 1 0 0 1 1 1 1 Histone chaperone Rttp106-like BUD22 PF09073.10 ORF45367 - 2.9 7.1 22.2 0.14 11.5 16.1 1.8 2 0 0 2 2 2 0 BUD22 Actin PF00022.19 ORF45112 - 2.5e-139 464.4 0.0 7.9e-139 462.8 0.0 1.7 1 1 0 1 1 1 1 Actin Patched PF02460.18 ORF36553 - 4.3e-33 114.4 0.7 7e-33 113.7 0.7 1.3 1 1 0 1 1 1 1 Patched family MMPL PF03176.15 ORF36553 - 0.018 14.0 8.8 0.043 12.8 9.1 1.4 2 0 0 2 2 2 0 MMPL family SecD_SecF PF02355.16 ORF36553 - 0.44 9.9 9.0 0.017 14.5 3.2 1.5 2 0 0 2 2 2 0 Protein export membrane protein Glyco_transf_11 PF01531.16 ORF24559 - 0.055 12.7 0.0 0.095 11.9 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 11 Nucleotid_trans PF03407.16 ORF24559 - 0.11 12.5 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 Nucleotide-diphospho-sugar transferase Dickkopf_N PF04706.12 ORF22893 - 0.00027 21.4 14.6 0.00027 21.4 14.6 3.7 2 1 1 3 3 3 1 Dickkopf N-terminal cysteine-rich region EB PF01683.18 ORF22893 - 0.098 13.0 29.6 0.057 13.7 9.6 4.5 1 1 2 3 3 3 0 EB module DUF3606 PF12244.8 ORF152060 - 0.0032 17.4 0.2 5.5 7.0 0.0 2.9 3 0 0 3 3 3 2 Protein of unknown function (DUF3606) HTH_Tnp_IS630 PF01710.16 ORF151208 - 0.0015 18.6 4.8 0.0034 17.4 4.8 1.6 1 0 0 1 1 1 1 Transposase Ycf70 PF17382.2 ORF151208 - 0.082 13.3 2.1 0.53 10.7 0.3 2.4 2 0 0 2 2 2 0 Uncharacterized Ycf70-like Helicase_C PF00271.31 ORF148800 - 0.057 13.8 0.1 0.21 11.9 0.1 1.9 1 1 0 1 1 1 0 Helicase conserved C-terminal domain Cluap1 PF10234.9 ORF148283 - 4.1e-99 331.3 7.3 4.1e-99 331.3 7.3 1.5 1 1 1 2 2 2 1 Clusterin-associated protein-1 Lebercilin PF15619.6 ORF148283 - 0.0036 17.0 17.0 0.0036 17.0 17.0 1.8 1 1 1 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease SesA PF17107.5 ORF148283 - 0.017 15.3 0.9 0.017 15.3 0.9 2.2 2 1 0 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Prominin PF05478.11 ORF148283 - 0.12 10.4 7.4 0.17 9.8 7.4 1.3 1 0 0 1 1 1 0 Prominin DUF745 PF05335.13 ORF148283 - 0.92 9.2 4.5 0.73 9.5 2.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 ORF148283 - 2.8 8.0 8.0 0.63 10.1 1.9 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Fzo_mitofusin PF04799.13 ORF148283 - 3.8 7.0 7.1 0.24 10.9 1.4 1.9 2 0 0 2 2 2 0 fzo-like conserved region Exonuc_VII_L PF02601.15 ORF148283 - 9.3 5.7 12.2 13 5.3 11.3 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit zf-RING_2 PF13639.6 ORF144039 - 1.9e-07 31.3 13.9 1.9e-07 31.3 13.9 2.3 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF144039 - 1.8e-05 24.9 12.6 5.4e-05 23.4 12.6 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF144039 - 8.8e-05 22.2 10.1 0.0003 20.5 10.1 2.0 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF144039 - 0.00015 21.5 13.2 0.00062 19.6 13.2 2.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF144039 - 0.0034 17.0 9.4 0.0034 17.0 9.4 2.2 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type MscS_TM PF12794.7 ORF144039 - 0.14 11.0 12.6 0.13 11.0 11.6 1.5 1 1 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 zf-RING_5 PF14634.6 ORF144039 - 0.33 10.9 16.6 0.07 13.1 12.1 2.4 2 0 0 2 2 1 0 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF144039 - 0.45 10.6 8.6 0.85 9.7 6.8 2.4 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger RseC_MucC PF04246.12 ORF144039 - 1.6 8.6 8.5 2.8 7.9 0.1 3.2 2 1 1 3 3 3 0 Positive regulator of sigma(E), RseC/MucC zf-C3HC4_2 PF13923.6 ORF144039 - 2.5 8.0 18.2 0.23 11.4 12.6 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF144039 - 2.7 8.2 14.9 0.24 11.6 7.8 3.1 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF144039 - 3.7 7.7 19.5 0.13 12.3 11.7 2.6 2 0 0 2 2 2 0 RING-type zinc-finger Cation_efflux PF01545.21 ORF141710 - 4e-43 147.5 6.7 5e-43 147.2 6.7 1.1 1 0 0 1 1 1 1 Cation efflux family 7TM_GPCR_Sra PF02117.16 ORF141710 - 0.14 10.9 0.2 6.8 5.4 0.0 2.1 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Sra FtsX PF02687.21 ORF141710 - 6.7 7.3 6.2 11 6.5 2.5 2.8 1 1 1 2 2 2 0 FtsX-like permease family Kelch_4 PF13418.6 ORF141654 - 1.2e-11 44.4 5.0 0.003 17.5 0.0 5.6 5 1 0 5 5 5 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF141654 - 4.4e-08 32.9 2.4 0.012 15.6 0.0 4.2 4 0 0 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF141654 - 1.1e-07 32.0 1.9 0.77 10.1 0.0 5.4 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF141654 - 1.2e-07 31.2 1.8 0.062 12.9 0.0 4.2 4 0 0 4 4 4 2 Kelch motif Kelch_6 PF13964.6 ORF141654 - 5.7e-07 29.6 0.9 2.1 8.7 0.1 4.9 4 1 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 ORF141654 - 0.0017 18.2 3.3 3.7 7.7 0.0 4.5 4 0 0 4 4 4 2 Kelch motif Pkinase PF00069.25 ORF137273 - 8.5e-13 48.3 0.8 8.4e-09 35.2 0.1 2.4 3 0 0 3 3 3 2 Protein kinase domain Acylphosphatase PF00708.18 ORF137273 - 0.056 13.8 0.0 12 6.4 0.0 2.5 2 0 0 2 2 2 0 Acylphosphatase HTH_19 PF12844.7 ORF137273 - 0.52 10.4 0.0 0.52 10.4 0.0 2.7 3 1 0 3 3 3 0 Helix-turn-helix domain TraB PF01963.17 ORF135877 - 6.7e-05 22.9 0.0 0.00022 21.2 0.0 1.8 2 0 0 2 2 2 1 TraB family MORN PF02493.20 ORF133536 - 1.6e-08 34.0 14.2 1.2e-05 25.0 1.0 2.6 2 0 0 2 2 2 2 MORN repeat DUF3048_C PF17479.2 ORF133536 - 0.061 13.7 1.9 0.32 11.4 1.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain V-ATPase_C PF03223.15 ORF125695 - 3.9e-79 266.7 7.9 4.7e-79 266.5 7.9 1.0 1 0 0 1 1 1 1 V-ATPase subunit C Acetyltransf_11 PF13720.6 ORF125695 - 0.14 12.7 0.0 0.32 11.5 0.0 1.6 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Phg_2220_C PF09524.10 ORF125695 - 0.24 11.5 3.7 0.46 10.6 0.2 3.0 3 0 0 3 3 3 0 Conserved phage C-terminus (Phg_2220_C) Pkinase PF00069.25 ORF122759 - 1.6e-45 155.6 0.0 2.3e-45 155.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF122759 - 2.1e-22 79.7 0.0 2.8e-22 79.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF122759 - 1.6e-08 34.2 0.0 2.3e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF122759 - 4.7e-06 26.1 0.1 1.2e-05 24.8 0.0 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF122759 - 0.00029 19.7 0.0 0.00067 18.5 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF122759 - 0.0027 17.7 0.0 0.0074 16.2 0.0 1.7 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF122759 - 0.027 13.4 0.0 0.04 12.8 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain DUF3237 PF11578.8 ORF122759 - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) GAS2 PF02187.17 ORF120192 - 0.0078 16.3 0.4 0.037 14.1 0.0 2.2 2 0 0 2 2 2 1 Growth-Arrest-Specific Protein 2 Domain DUF948 PF06103.11 ORF120192 - 0.25 11.6 5.3 5.2 7.4 0.7 2.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) HOOK PF05622.12 ORF120192 - 0.29 9.3 31.0 0.18 9.9 13.4 2.1 1 1 1 2 2 2 0 HOOK protein Herpes_UL25 PF01499.16 ORF120192 - 0.37 9.2 13.1 0.29 9.6 11.7 1.4 1 1 0 1 1 1 0 Herpesvirus UL25 family DUF4407 PF14362.6 ORF120192 - 0.76 9.1 17.7 1.3 8.3 17.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) NAPRTase_C PF17956.1 ORF120192 - 1.4 9.4 10.1 0.2 12.1 1.0 3.0 3 1 0 3 3 3 0 Nicotinate phosphoribosyltransferase C-terminal domain IL10 PF00726.17 ORF120192 - 1.4 8.4 5.6 0.93 9.0 0.7 2.8 2 1 0 3 3 3 0 Interleukin 10 Lebercilin PF15619.6 ORF120192 - 1.5 8.4 37.2 5.5 6.6 37.2 1.9 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease CorA PF01544.18 ORF120192 - 2.1 7.6 13.2 3.9 6.7 13.2 1.5 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein FapA PF03961.13 ORF120192 - 2.8 6.4 16.2 0.47 9.0 5.4 2.3 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF3584 PF12128.8 ORF120192 - 2.9 5.3 27.9 3.6 5.0 27.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AKNA PF12443.8 ORF120192 - 3.4 8.4 20.0 1.2 9.8 5.0 3.3 2 1 1 3 3 2 0 AT-hook-containing transcription factor Phage_GP20 PF06810.11 ORF120192 - 4.3 7.1 14.2 2 8.2 2.1 3.1 1 1 1 2 2 2 0 Phage minor structural protein GP20 Prominin PF05478.11 ORF120192 - 7.3 4.4 10.5 11 3.8 10.5 1.2 1 0 0 1 1 1 0 Prominin GAS PF13851.6 ORF120192 - 7.6 5.8 35.1 0.87 8.9 10.8 2.6 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding Sec34 PF04136.15 ORF120192 - 7.6 6.4 14.5 6 6.7 5.5 2.7 2 1 0 2 2 2 0 Sec34-like family BLOC1_2 PF10046.9 ORF120192 - 8.2 6.8 11.0 5.2 7.4 3.2 2.9 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Aldedh PF00171.22 ORF10681 - 4.7e-142 473.7 0.0 5.8e-142 473.5 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Chloroa_b-bind PF00504.21 ORF103692 - 1.4e-60 204.5 4.1 2.3e-32 112.7 0.1 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein SR-25 PF10500.9 ORF103692 - 0.41 10.2 3.7 0.61 9.7 3.7 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein MqsR_toxin PF15723.5 ORF102939 - 0.12 12.8 0.0 0.22 11.9 0.0 1.4 1 0 0 1 1 1 0 Motility quorum-sensing regulator, toxin of MqsA TFIIB PF00382.19 ORF102939 - 0.19 11.8 0.8 22 5.2 0.1 2.6 2 0 0 2 2 2 0 Transcription factor TFIIB repeat DUF883 PF05957.13 ORF102113 - 7.1 7.3 13.4 3.5 8.3 6.6 3.2 2 2 0 2 2 2 0 Bacterial protein of unknown function (DUF883) CRAL_TRIO PF00650.20 ORF85095 - 2.2e-27 95.7 0.2 3.7e-27 95.0 0.2 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF85095 - 0.00013 22.2 0.0 0.00025 21.2 0.0 1.4 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DNA_photolyase PF00875.18 ORF85095 - 0.18 11.8 0.1 0.62 10.1 0.0 1.9 2 0 0 2 2 2 0 DNA photolyase Metallophos PF00149.28 ORF82222 - 1.3e-10 42.1 2.7 2e-10 41.5 2.7 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Ly49 PF08391.10 ORF81324 - 0.0093 16.3 1.2 0.0093 16.3 1.2 3.7 3 1 0 3 3 3 1 Ly49-like protein, N-terminal region Vpu PF00558.19 ORF81324 - 0.019 14.7 9.9 0.44 10.4 1.9 3.9 3 0 0 3 3 3 0 Vpu protein ECSCR PF15820.5 ORF81324 - 0.44 10.4 9.2 15 5.5 0.1 4.1 4 0 0 4 4 4 0 Endothelial cell-specific chemotaxis regulator UPF0542 PF15086.6 ORF81324 - 2.7 8.0 5.4 1 9.3 0.1 2.8 3 1 0 3 3 3 0 Uncharacterised protein family UPF0542 CS PF04969.16 ORF80020 - 0.024 15.7 0.0 0.049 14.6 0.0 1.6 1 0 0 1 1 1 0 CS domain Rb_C PF08934.10 ORF80020 - 0.12 12.1 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Rb C-terminal domain Sigma_reg_N PF13800.6 ORF77044 - 0.0034 17.6 0.7 2.5 8.4 0.3 2.6 2 0 0 2 2 2 2 Sigma factor regulator N-terminal DNA_pol_A_exoN PF18305.1 ORF72961 - 0.042 14.1 2.4 0.1 12.9 2.4 1.6 1 0 0 1 1 1 0 3' to 5' exonuclease C-terminal domain ABC2_membrane_3 PF12698.7 ORF72220 - 4.7e-30 104.9 7.8 6.4e-30 104.4 7.8 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 ORF72220 - 6.2e-19 68.2 10.0 6.2e-19 68.2 10.0 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 ORF72220 - 3.2e-17 62.8 8.8 4.5e-17 62.3 8.8 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 ORF72220 - 0.0018 18.3 9.9 0.0018 18.3 9.9 1.6 2 0 0 2 2 2 1 ABC-2 family transporter protein Channel_Tsx PF03502.13 ORF6689 - 3.9e-82 275.7 20.8 4.6e-82 275.4 20.8 1.1 1 0 0 1 1 1 1 Nucleoside-specific channel-forming protein, Tsx LPAM_1 PF08139.12 ORF6689 - 0.0023 18.3 2.1 0.0045 17.4 2.1 1.5 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site cNMP_binding PF00027.29 ORF61846 - 0.00021 21.3 0.0 0.00037 20.5 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DASH_Dam1 PF08653.10 ORF61846 - 7.3 6.5 7.5 14 5.5 0.4 3.7 4 0 0 4 4 4 0 DASH complex subunit Dam1 Peptidase_M20 PF01546.28 ORF60243 - 2.8e-33 115.4 0.0 4.1e-33 114.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF60243 - 1.5e-25 89.2 0.0 2.6e-25 88.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 ORF60243 - 0.00055 19.7 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M42 PF05343.14 ORF60243 - 0.028 13.4 0.0 0.048 12.7 0.0 1.3 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase vATP-synt_AC39 PF01992.16 ORF60200 - 3e-76 257.1 6.8 3.5e-76 256.9 6.8 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit ATP-cone PF03477.16 ORF60200 - 0.089 13.4 0.9 0.61 10.7 0.2 2.4 2 0 0 2 2 2 0 ATP cone domain PEP-utilizers_C PF02896.18 ORF5059 - 3.8e-127 423.4 0.1 4.7e-127 423.1 0.1 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF5059 - 0.00012 21.7 0.0 0.00048 19.8 0.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain HpcH_HpaI PF03328.14 ORF5059 - 0.00038 19.7 1.3 0.00045 19.4 0.1 1.7 2 0 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family Peptidase_S10 PF00450.22 ORF39176 - 6.7e-73 246.5 0.4 2.3e-38 132.7 1.7 2.0 1 1 1 2 2 2 2 Serine carboxypeptidase Cytochrome_cB PF11783.8 ORF39176 - 0.024 14.5 0.2 0.041 13.8 0.2 1.4 1 0 0 1 1 1 0 Cytochrome c bacterial DNA_pol3_delt_C PF14840.6 ORF3539 - 2.3e-73 244.4 6.2 2.3e-73 244.4 6.2 1.7 2 0 0 2 2 2 1 Processivity clamp loader gamma complex DNA pol III C-term DNA_pol3_delta PF06144.13 ORF3539 - 4.3e-47 160.1 0.1 6.9e-47 159.5 0.1 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit HTH_18 PF12833.7 ORF3539 - 0.03 14.6 1.5 1 9.6 0.0 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain Metallophos PF00149.28 ORF27417 - 1.2e-13 52.0 1.7 1.9e-13 51.4 1.7 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF27417 - 0.00025 21.3 0.0 0.0009 19.5 0.0 1.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_C PF14008.6 ORF27417 - 0.078 13.8 0.2 0.19 12.6 0.2 1.6 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C zf-C4_ClpX PF06689.13 ORF223 - 0.22 11.4 0.0 0.22 11.4 0.0 4.8 6 0 0 6 6 6 0 ClpX C4-type zinc finger WD40 PF00400.32 ORF20581 - 2.5e-42 142.0 13.7 2.9e-07 31.1 0.5 7.6 8 0 0 8 8 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF20581 - 3.9e-14 52.7 0.0 0.00094 19.4 0.0 5.8 1 1 5 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF20581 - 2.4e-07 30.0 3.6 0.49 9.3 0.0 5.3 1 1 4 6 6 6 4 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 ORF20581 - 4.2e-05 23.0 0.0 0.002 17.5 0.0 2.3 2 0 0 2 2 2 1 WD40-like domain PD40 PF07676.12 ORF20581 - 4.4e-05 23.3 0.2 2.2 8.3 0.0 4.2 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat SGL PF08450.12 ORF20581 - 9.7e-05 22.1 0.4 0.00055 19.6 0.4 2.2 1 1 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Proteasome_A_N PF10584.9 ORF20581 - 0.00026 20.6 0.5 0.3 10.8 0.0 3.8 3 0 0 3 3 3 1 Proteasome subunit A N-terminal signature Nbas_N PF15492.6 ORF20581 - 0.00078 18.9 0.4 1.7 7.9 0.0 3.8 1 1 3 4 4 4 1 Neuroblastoma-amplified sequence, N terminal Nup160 PF11715.8 ORF20581 - 0.02 13.6 0.3 0.21 10.2 0.1 2.1 1 1 1 2 2 2 0 Nucleoporin Nup120/160 eIF2A PF08662.11 ORF20581 - 0.053 13.4 0.0 0.23 11.3 0.0 2.0 2 1 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A Rad60-SLD PF11976.8 ORF20581 - 0.11 12.4 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ret2_MD PF18528.1 ORF20581 - 0.13 12.7 0.0 1.5 9.2 0.0 2.6 2 1 0 2 2 2 0 RNA editing 3' terminal uridylyl transferase 2 middle domain ubiquitin PF00240.23 ORF20581 - 0.14 11.9 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin family Tubulin PF00091.25 ORF19552 - 3.2e-42 144.9 0.6 4.8e-42 144.4 0.6 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 ORF19552 - 8.5e-38 128.6 1.2 2.6e-37 127.0 1.2 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain NAD_binding_10 PF13460.6 ORF19552 - 0.0026 17.7 0.2 0.008 16.1 0.2 1.8 1 0 0 1 1 1 1 NAD(P)H-binding HATPase_c PF02518.26 ORF19552 - 0.092 13.3 0.2 0.26 11.8 0.0 1.8 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tubulin_2 PF13809.6 ORF19552 - 0.18 10.9 8.1 3.8 6.6 3.0 2.5 1 1 1 2 2 2 0 Tubulin like DUF2838 PF10998.8 ORF147 - 9.8e-10 38.7 16.5 9.8e-10 38.7 16.5 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF2838) VWA PF00092.28 ORF144872 - 4.5e-05 23.8 0.0 6.9e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF144872 - 0.002 18.8 0.0 0.0034 18.0 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 ORF144872 - 0.074 12.4 0.0 1 8.7 0.0 2.2 2 0 0 2 2 2 0 VWA domain containing CoxE-like protein DUF5310 PF17237.2 ORF144872 - 1.7 8.6 3.3 2.8 7.9 0.1 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5310) cNMP_binding PF00027.29 ORF140558 - 4.5e-07 29.9 0.0 1.7e-06 28.0 0.0 2.0 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain OsmC PF02566.19 ORF138212 - 0.56 10.7 0.0 0.56 10.7 0.0 3.1 3 0 0 3 3 3 0 OsmC-like protein DUF2451 PF10474.9 ORF13296 - 0.0022 17.8 0.9 0.026 14.3 0.9 2.1 1 1 0 1 1 1 1 Protein of unknown function C-terminus (DUF2451) DHquinase_II PF01220.19 ORF13296 - 0.18 11.5 1.4 0.56 9.9 0.1 2.4 2 1 0 2 2 2 0 Dehydroquinase class II Exonuc_VII_L PF02601.15 ORF13296 - 0.57 9.7 11.0 0.55 9.8 2.0 2.2 2 0 0 2 2 2 0 Exonuclease VII, large subunit Ntox16 PF15523.6 ORF13296 - 0.8 10.0 4.0 1.8 8.8 0.0 3.0 3 0 0 3 3 3 0 Novel toxin 16 CENP-F_leu_zip PF10473.9 ORF13296 - 4.9 7.2 17.4 0.091 12.8 6.0 2.9 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 OAD_gamma PF04277.13 ORF132877 - 7 7.3 5.3 24 5.6 0.8 2.8 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain GST_N_2 PF13409.6 ORF124426 - 1.1e-15 57.7 0.0 1.9e-15 56.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF124426 - 2e-13 50.2 0.0 4.4e-13 49.1 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF124426 - 1.7e-06 28.2 0.1 3e-06 27.4 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF124426 - 0.0014 18.8 0.6 0.0028 17.8 0.3 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain HEPN_Cthe2314 PF18730.1 ORF124426 - 0.0051 16.9 0.0 0.012 15.7 0.0 1.6 1 0 0 1 1 1 1 Cthe_2314-like HEPN GST_N_3 PF13417.6 ORF124426 - 0.0059 17.0 0.0 1.3 9.5 0.0 2.3 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain Pkinase PF00069.25 ORF123960 - 2.3e-60 204.2 0.1 2.9e-60 203.9 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF123960 - 9.4e-42 143.1 0.0 1.3e-41 142.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF123960 - 0.00016 20.6 0.0 0.00027 19.9 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF123960 - 0.00035 20.0 0.0 0.00096 18.5 0.0 1.6 1 1 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF123960 - 0.014 14.5 0.1 0.1 11.6 0.0 2.1 2 0 0 2 2 2 0 Seadornavirus VP7 Haspin_kinase PF12330.8 ORF123960 - 0.017 14.1 0.0 0.029 13.3 0.0 1.3 1 0 0 1 1 1 0 Haspin like kinase domain E1_dh PF00676.20 ORF118519 - 5.9e-105 350.5 0.0 6.9e-105 350.3 0.0 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 ORF118519 - 0.0022 17.3 0.1 0.0041 16.4 0.0 1.6 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 ORF118519 - 0.0095 15.7 1.0 0.016 15.0 1.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PAP_assoc PF03828.19 ORF114130 - 4.4e-06 26.8 0.1 9.6e-06 25.7 0.1 1.6 1 0 0 1 1 1 1 Cid1 family poly A polymerase NTP_transf_2 PF01909.23 ORF114130 - 0.00083 19.6 0.0 0.0026 18.0 0.0 1.8 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 ORF114130 - 0.0029 17.6 0.0 0.0084 16.2 0.0 1.7 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase PAP_central PF04928.17 ORF114130 - 0.14 11.1 0.0 0.23 10.4 0.0 1.4 1 0 0 1 1 1 0 Poly(A) polymerase central domain Ndc80_HEC PF03801.13 ORF114130 - 0.17 11.5 0.0 1.7 8.2 0.0 2.1 2 0 0 2 2 2 0 HEC/Ndc80p family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks39.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks39.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks39.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks39.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:18:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2140 PF09911.9 ORF141169 - 0.088 12.4 0.7 0.5 9.9 0.0 2.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) GLEYA PF10528.9 ORF141169 - 0.098 13.1 0.2 3.3 8.2 0.0 3.0 2 0 0 2 2 2 0 GLEYA domain NtA PF03146.15 ORF141169 - 0.17 11.8 0.2 0.45 10.4 0.2 1.7 1 0 0 1 1 1 0 Agrin NtA domain DUF2140 PF09911.9 ORF111949 - 0.088 12.4 0.7 0.5 9.9 0.0 2.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) GLEYA PF10528.9 ORF111949 - 0.098 13.1 0.2 3.3 8.2 0.0 3.0 2 0 0 2 2 2 0 GLEYA domain NtA PF03146.15 ORF111949 - 0.17 11.8 0.2 0.45 10.4 0.2 1.7 1 0 0 1 1 1 0 Agrin NtA domain DUF2140 PF09911.9 ORF102163 - 0.085 12.4 0.7 0.5 9.9 0.0 2.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) GLEYA PF10528.9 ORF102163 - 0.097 13.1 0.2 3.3 8.2 0.0 3.0 2 0 0 2 2 2 0 GLEYA domain NtA PF03146.15 ORF102163 - 0.17 11.8 0.2 0.45 10.4 0.2 1.7 1 0 0 1 1 1 0 Agrin NtA domain Sun2_CC2 PF18580.1 ORF135827 - 0.012 15.8 2.3 0.035 14.3 2.3 1.8 1 0 0 1 1 1 0 SUN2 coiled coil domain 2 Glyco_hydro_31 PF01055.26 ORF26218 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF26218 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF26218 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DUF2017 PF09438.10 ORF23144 - 0.011 15.6 0.0 0.025 14.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF2017) TPR_2 PF07719.17 ORF23144 - 0.089 13.0 0.8 0.23 11.7 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF23144 - 0.1 12.5 0.3 0.46 10.4 0.3 2.1 1 0 0 1 1 1 0 Tetratricopeptide repeat Glyco_hydro_63N PF16923.5 ORF23144 - 0.56 10.3 3.5 7 6.7 0.0 3.4 5 0 0 5 5 5 0 Glycosyl hydrolase family 63 N-terminal domain MARVEL PF01284.23 ORF23144 - 2.3 8.2 6.0 1.6 8.8 0.2 2.4 2 0 0 2 2 2 0 Membrane-associating domain Glyco_hydro_31 PF01055.26 ORF150907 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF150907 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF150907 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Glyco_hydro_31 PF01055.26 ORF141528 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF141528 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF141528 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Glyco_hydro_31 PF01055.26 ORF104741 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF104741 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF104741 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Glyco_hydro_31 PF01055.26 ORF104260 - 6.5e-127 424.4 5.8 5.1e-112 375.3 3.8 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF104260 - 3.1e-05 24.2 0.1 8.6e-05 22.8 0.1 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like PNP_phzG_C PF10590.9 ORF104260 - 0.1 12.7 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AAA_30 PF13604.6 ORF29501 - 0.00032 20.5 0.5 0.0019 18.0 0.5 2.1 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF29501 - 0.00059 19.6 0.0 0.0035 17.1 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 ORF29501 - 0.0012 19.2 0.5 0.36 11.1 0.3 2.8 2 1 1 3 3 3 1 AAA domain AAA PF00004.29 ORF29501 - 0.0068 16.8 0.0 0.024 15.1 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 ORF29501 - 0.0071 16.1 0.1 0.013 15.2 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_19 PF13245.6 ORF29501 - 0.023 15.0 1.6 1.6 9.1 0.3 2.4 1 1 1 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF29501 - 0.024 15.0 2.7 0.24 11.8 0.6 3.3 2 1 0 2 2 2 0 AAA ATPase domain Sigma54_activ_2 PF14532.6 ORF29501 - 0.041 14.0 0.1 0.099 12.8 0.1 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 ORF29501 - 0.042 13.1 0.0 0.23 10.7 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin Bac_DnaA PF00308.18 ORF29501 - 0.094 12.5 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial dnaA protein Chlam_PMP PF02415.17 ORF96060 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF96060 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like zf_CCCH_4 PF18345.1 ORF94293 - 1.6e-12 47.0 16.3 1e-06 28.6 4.6 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF94293 - 8.3e-10 38.3 11.1 1.6e-05 24.7 1.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF94293 - 2.1e-08 33.8 12.0 0.00019 21.2 1.9 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF94293 - 5e-08 33.1 0.8 1.7e-07 31.4 0.8 1.9 1 0 0 1 1 1 1 Zinc-finger containing family Torus PF16131.5 ORF94293 - 2.2e-06 28.3 6.1 0.0096 16.6 0.5 2.8 1 1 1 2 2 2 2 Torus domain zf-CCCH_2 PF14608.6 ORF94293 - 0.009 16.5 12.1 0.54 10.8 2.0 2.7 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Chlam_PMP PF02415.17 ORF94127 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF94127 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF76021 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF76021 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF62157 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF62157 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF60803 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF60803 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like zf_CCCH_4 PF18345.1 ORF56180 - 1.6e-12 47.0 16.3 1e-06 28.6 4.6 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF56180 - 8.3e-10 38.3 11.1 1.6e-05 24.7 1.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF56180 - 2.1e-08 33.8 12.0 0.00019 21.2 1.9 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF56180 - 5e-08 33.1 0.8 1.7e-07 31.4 0.8 1.9 1 0 0 1 1 1 1 Zinc-finger containing family Torus PF16131.5 ORF56180 - 2.2e-06 28.3 6.1 0.0096 16.6 0.5 2.8 1 1 1 2 2 2 2 Torus domain zf-CCCH_2 PF14608.6 ORF56180 - 0.009 16.5 12.1 0.54 10.8 2.0 2.7 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Chlam_PMP PF02415.17 ORF54520 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF54520 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF22769 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF22769 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF144212 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF144212 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF119535 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF119535 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like zf_CCCH_4 PF18345.1 ORF116248 - 1.6e-12 47.0 16.3 1e-06 28.6 4.6 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF116248 - 8.3e-10 38.3 11.1 1.6e-05 24.7 1.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF116248 - 2.1e-08 33.8 12.0 0.00019 21.2 1.9 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF116248 - 5e-08 33.1 0.8 1.7e-07 31.4 0.8 1.9 1 0 0 1 1 1 1 Zinc-finger containing family Torus PF16131.5 ORF116248 - 2.2e-06 28.3 6.1 0.0096 16.6 0.5 2.8 1 1 1 2 2 2 2 Torus domain zf-CCCH_2 PF14608.6 ORF116248 - 0.009 16.5 12.1 0.54 10.8 2.0 2.7 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Chlam_PMP PF02415.17 ORF108475 - 0.00031 21.0 2.7 0.24 12.0 0.0 3.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Ephrin_rec_like PF07699.13 ORF108475 - 0.0019 17.9 3.5 0.0019 17.9 3.5 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like OHA PF14418.6 ORF38949 - 0.17 11.7 0.0 0.44 10.4 0.0 1.6 1 0 0 1 1 1 0 OST-HTH Associated domain DUF1570 PF07607.11 ORF112519 - 0.14 12.4 0.3 2.8 8.2 0.0 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1570) CD36 PF01130.21 ORF82291 - 2.2e-46 158.3 8.5 6.6e-36 123.8 0.1 2.5 2 0 0 2 2 2 2 CD36 family CD36 PF01130.21 ORF74081 - 2.2e-46 158.3 8.5 6.6e-36 123.8 0.1 2.5 2 0 0 2 2 2 2 CD36 family DUF1570 PF07607.11 ORF2382 - 0.13 12.5 0.3 2.8 8.2 0.0 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1570) ABC2_membrane_3 PF12698.7 ORF54109 - 3.6e-39 134.9 21.9 3.6e-39 134.9 21.9 1.8 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 ORF54109 - 1.5e-29 103.3 0.0 1.9e-28 99.7 0.0 2.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF54109 - 1.6e-16 61.0 6.5 1.1e-07 32.0 0.0 4.6 4 1 1 5 5 5 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF54109 - 5.6e-05 22.7 0.0 0.037 13.5 0.0 3.1 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain Cortex-I_coil PF09304.10 ORF54109 - 0.017 15.3 0.5 0.056 13.7 0.5 1.8 1 0 0 1 1 1 0 Cortexillin I, coiled coil SbcCD_C PF13558.6 ORF54109 - 0.03 14.6 0.1 8.8 6.6 0.0 3.3 3 1 0 3 3 3 0 Putative exonuclease SbcCD, C subunit ABC_membrane_3 PF13748.6 ORF54109 - 0.069 12.4 2.5 1.1 8.5 1.1 2.4 2 0 0 2 2 2 0 ABC transporter transmembrane region DUF4162 PF13732.6 ORF54109 - 0.42 11.4 5.0 8.2 7.2 0.2 3.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4162) ABC2_membrane_3 PF12698.7 ORF114767 - 3.6e-39 134.9 21.9 3.6e-39 134.9 21.9 1.8 2 0 0 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 ORF114767 - 1.5e-29 103.3 0.0 1.9e-28 99.7 0.0 2.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF114767 - 1.6e-16 61.0 6.5 1.1e-07 32.0 0.0 4.6 4 1 1 5 5 5 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF114767 - 5.6e-05 22.7 0.0 0.037 13.5 0.0 3.1 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain Cortex-I_coil PF09304.10 ORF114767 - 0.017 15.3 0.5 0.056 13.7 0.5 1.8 1 0 0 1 1 1 0 Cortexillin I, coiled coil SbcCD_C PF13558.6 ORF114767 - 0.03 14.6 0.1 8.8 6.6 0.0 3.3 3 1 0 3 3 3 0 Putative exonuclease SbcCD, C subunit ABC_membrane_3 PF13748.6 ORF114767 - 0.069 12.4 2.5 1.1 8.5 1.1 2.4 2 0 0 2 2 2 0 ABC transporter transmembrane region DUF4162 PF13732.6 ORF114767 - 0.42 11.4 5.0 8.2 7.2 0.2 3.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4162) CD36 PF01130.21 ORF57745 - 2.2e-46 158.4 8.5 6.5e-36 123.8 0.1 2.5 2 0 0 2 2 2 2 CD36 family EGF_CA PF07645.15 ORF83126 - 0.21 11.8 8.8 0.71 10.1 8.8 1.9 1 0 0 1 1 1 0 Calcium-binding EGF domain rve PF00665.26 ORF42653 - 0.0014 18.8 0.0 0.0035 17.5 0.0 1.7 1 0 0 1 1 1 1 Integrase core domain EGF_CA PF07645.15 ORF98034 - 0.21 11.8 8.8 0.71 10.1 8.8 1.9 1 0 0 1 1 1 0 Calcium-binding EGF domain EGF_CA PF07645.15 ORF20852 - 0.21 11.8 8.8 0.71 10.1 8.8 1.9 1 0 0 1 1 1 0 Calcium-binding EGF domain COX2 PF00116.20 ORF70306 - 3.9e-20 71.9 4.3 9.6e-20 70.7 0.4 2.6 2 0 0 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain COX2 PF00116.20 ORF147878 - 3.9e-20 71.9 4.3 9.6e-20 70.7 0.4 2.6 2 0 0 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain COX2 PF00116.20 ORF131145 - 3.9e-20 71.9 4.3 9.6e-20 70.7 0.4 2.6 2 0 0 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain COX2 PF00116.20 ORF108896 - 3.9e-20 71.9 4.3 9.6e-20 70.7 0.4 2.6 2 0 0 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain COX2 PF00116.20 ORF107084 - 3.9e-20 71.9 4.3 9.6e-20 70.7 0.4 2.6 2 0 0 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain Peptidase_C2 PF00648.21 ORF95970 - 7.8e-79 264.8 0.0 1.1e-78 264.3 0.0 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF95970 - 1.2e-28 100.1 3.5 2.1e-10 41.0 0.1 5.1 5 0 0 5 5 5 4 Calpain large subunit, domain III rve PF00665.26 ORF119417 - 0.0014 18.8 0.0 0.0035 17.5 0.0 1.8 1 0 0 1 1 1 1 Integrase core domain UCH PF00443.29 ORF73851 - 1.1e-37 129.9 1.6 3.1e-37 128.5 1.6 1.8 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF73851 - 2.2e-29 103.1 0.3 6.2e-29 101.6 0.3 1.8 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH PF00443.29 ORF62852 - 1.1e-37 129.9 1.6 3.1e-37 128.5 1.6 1.8 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF62852 - 2.2e-29 103.1 0.3 6.2e-29 101.6 0.3 1.8 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH PF00443.29 ORF100302 - 1.1e-37 129.9 1.6 3.1e-37 128.5 1.6 1.8 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF100302 - 2.2e-29 103.1 0.3 6.2e-29 101.6 0.3 1.8 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase ABC_tran PF00005.27 ORF7129 - 1.8e-51 174.2 6.0 5.3e-29 101.5 0.0 3.3 3 0 0 3 3 3 2 ABC transporter ABC_membrane PF00664.23 ORF7129 - 1.2e-20 74.3 9.4 1.2e-20 74.3 9.4 1.7 2 0 0 2 2 2 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF7129 - 4.1e-13 49.3 6.9 2.6e-05 23.8 0.4 4.0 1 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF7129 - 1.7e-08 34.5 1.8 0.0044 17.1 0.0 3.3 3 0 0 3 3 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF7129 - 6.6e-08 32.6 0.4 0.00022 21.2 0.2 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 ORF7129 - 1.3e-07 31.3 0.1 0.005 16.6 0.0 2.9 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF7129 - 7.6e-05 23.0 0.2 0.36 11.1 0.0 3.0 2 1 0 2 2 2 2 AAA domain Dynamin_N PF00350.23 ORF7129 - 0.0001 22.4 0.0 0.0001 22.4 0.0 4.0 4 0 0 4 4 4 1 Dynamin family AAA_21 PF13304.6 ORF7129 - 0.00013 21.9 4.2 0.2 11.4 0.0 4.8 3 2 2 5 5 5 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF815 PF05673.13 ORF7129 - 0.00016 21.0 0.2 0.53 9.4 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_24 PF13479.6 ORF7129 - 0.00019 21.2 2.5 0.04 13.6 0.0 3.3 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.6 ORF7129 - 0.00077 19.9 0.0 0.16 12.3 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain ATP_bind_1 PF03029.17 ORF7129 - 0.0036 17.1 0.5 2.5 7.8 0.0 3.3 3 0 0 3 3 3 1 Conserved hypothetical ATP binding protein Zeta_toxin PF06414.12 ORF7129 - 0.004 16.4 0.1 1.2 8.4 0.0 2.7 2 0 0 2 2 2 1 Zeta toxin Roc PF08477.13 ORF7129 - 0.0052 17.0 0.1 7.2 6.8 0.0 3.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA PF00004.29 ORF7129 - 0.0061 17.0 0.1 7.3 7.0 0.2 3.5 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) FtsK_SpoIIIE PF01580.18 ORF7129 - 0.0098 15.3 0.1 1.3 8.3 0.0 2.5 2 0 0 2 2 2 1 FtsK/SpoIIIE family PduV-EutP PF10662.9 ORF7129 - 0.011 15.5 0.3 5.4 6.8 0.0 2.7 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation MeaB PF03308.16 ORF7129 - 0.012 14.7 0.1 0.42 9.5 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB T2SSE PF00437.20 ORF7129 - 0.012 14.7 0.1 3.9 6.4 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein RNA_helicase PF00910.22 ORF7129 - 0.013 15.9 0.0 4.4 7.8 0.0 3.2 2 0 0 2 2 2 0 RNA helicase TsaE PF02367.17 ORF7129 - 0.013 15.5 0.1 2.8 8.0 0.0 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE GTP_EFTU PF00009.27 ORF7129 - 0.013 15.0 0.1 2.6 7.5 0.0 3.1 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_7 PF12775.7 ORF7129 - 0.014 14.9 0.1 2.1 7.9 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_18 PF13238.6 ORF7129 - 0.015 15.9 2.7 1.3 9.6 0.0 3.4 3 0 0 3 3 2 0 AAA domain IstB_IS21 PF01695.17 ORF7129 - 0.019 14.7 0.1 7 6.3 0.0 3.0 3 0 0 3 3 3 0 IstB-like ATP binding protein DUF87 PF01935.17 ORF7129 - 0.025 14.7 10.0 0.21 11.7 0.1 3.3 3 1 0 3 3 3 0 Helicase HerA, central domain cobW PF02492.19 ORF7129 - 0.044 13.4 1.8 2.6 7.6 0.0 2.8 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.6 ORF7129 - 0.067 12.8 0.0 4.4 6.8 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 ORF7129 - 0.099 12.3 0.4 8.1 6.1 0.1 2.8 2 1 0 2 2 2 0 AAA domain DUF3987 PF13148.6 ORF7129 - 0.17 10.8 0.0 0.17 10.8 0.0 2.4 3 0 0 3 3 2 0 Protein of unknown function (DUF3987) KH_2 PF07650.17 ORF7129 - 0.27 11.1 3.6 0.7 9.8 0.4 2.6 2 0 0 2 2 2 0 KH domain DDE_Tnp_1 PF01609.21 ORF7129 - 0.5 10.0 4.2 0.14 11.8 0.6 1.8 2 0 0 2 2 2 0 Transposase DDE domain AAA_23 PF13476.6 ORF7129 - 1.1 9.7 26.0 0.35 11.3 0.1 4.5 3 1 1 4 4 3 0 AAA domain AIG1 PF04548.16 ORF7129 - 1.2 8.5 7.4 0.83 8.9 0.0 3.3 3 0 0 3 3 3 0 AIG1 family Pap_E4 PF02711.14 ORF7129 - 1.2 10.1 6.7 1 10.4 0.9 2.3 2 0 0 2 2 2 0 E4 protein Ephrin_rec_like PF07699.13 ORF11022 - 3.6e-08 33.0 10.3 6.9e-07 28.9 1.5 5.2 3 2 2 5 5 5 3 Putative ephrin-receptor like TIR_2 PF13676.6 ORF11022 - 0.0057 17.3 0.0 0.019 15.5 0.0 1.8 2 0 0 2 2 2 1 TIR domain OpuAC PF04069.12 ORF11022 - 0.28 10.7 0.0 0.46 10.0 0.0 1.3 1 0 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system Guanylate_cyc PF00211.20 ORF84961 - 1.6e-14 53.9 0.0 2.9e-14 53.1 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Ion_trans PF00520.31 ORF84961 - 1.2e-06 28.0 7.2 2.3e-06 27.0 7.2 1.4 1 0 0 1 1 1 1 Ion transport protein DUF1673 PF07895.11 ORF84961 - 0.06 13.0 0.0 0.19 11.4 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) CTD PF12815.7 ORF11009 - 4.8e-05 23.8 11.1 0.002 18.6 5.7 3.1 1 1 1 2 2 2 2 Spt5 C-terminal nonapeptide repeat binding Spt4 Kinesin PF00225.23 ORF78852 - 6.4e-93 311.3 0.0 6.4e-93 311.3 0.0 4.3 2 1 4 6 6 6 1 Kinesin motor domain Microtub_bd PF16796.5 ORF78852 - 3.3e-12 46.6 0.1 3.3e-12 46.6 0.1 5.3 2 2 2 5 5 5 1 Microtubule binding BRE1 PF08647.11 ORF78852 - 0.0065 16.5 15.6 0.0065 16.5 15.6 8.6 2 1 5 8 8 8 2 BRE1 E3 ubiquitin ligase MbeD_MobD PF04899.12 ORF78852 - 0.27 11.4 0.1 0.27 11.4 0.1 5.3 5 1 1 6 6 6 0 MbeD/MobD like Kinesin PF00225.23 ORF51554 - 2.6e-97 325.8 0.4 2.6e-97 325.8 0.4 2.0 3 0 0 3 3 3 1 Kinesin motor domain Microtub_bd PF16796.5 ORF51554 - 1.4e-13 51.0 10.5 2.4e-12 47.0 0.0 4.2 4 1 1 5 5 5 2 Microtubule binding FHA PF00498.26 ORF51554 - 1.7e-06 28.2 0.0 5.9e-06 26.5 0.0 2.0 1 0 0 1 1 1 1 FHA domain Kinesin_assoc PF16183.5 ORF51554 - 0.0013 18.9 3.5 0.0013 18.9 3.5 4.3 4 1 1 5 5 5 1 Kinesin-associated Borrelia_P83 PF05262.11 ORF51554 - 6.3 5.2 45.2 0.0045 15.5 11.1 3.1 3 0 0 3 3 3 0 Borrelia P83/100 protein DUF4215 PF13948.6 ORF120366 - 1.2e-18 67.3 71.7 5.3e-09 36.4 18.0 4.5 5 0 0 5 5 5 3 Domain of unknown function (DUF4215) Filamin PF00630.19 ORF120366 - 2e-05 25.4 0.1 0.00013 22.7 0.0 2.5 2 0 0 2 2 2 1 Filamin/ABP280 repeat UPF0542 PF15086.6 ORF120366 - 0.017 15.0 1.0 0.058 13.3 0.4 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0542 OAD_gamma PF04277.13 ORF120366 - 0.15 12.7 0.1 0.15 12.7 0.1 3.7 4 0 0 4 4 4 0 Oxaloacetate decarboxylase, gamma chain Opiods_neuropep PF01160.18 ORF120366 - 3.9 7.6 9.9 3.3 7.9 1.6 2.9 2 0 0 2 2 2 0 Vertebrate endogenous opioids neuropeptide SIT PF15330.6 ORF120366 - 9.8 6.7 6.7 8.4 6.9 0.1 3.5 4 0 0 4 4 4 0 SHP2-interacting transmembrane adaptor protein, SIT Guanylate_cyc PF00211.20 ORF66542 - 1.9e-09 37.4 0.3 4.5e-09 36.2 0.1 1.8 2 0 0 2 2 2 1 Adenylate and Guanylate cyclase catalytic domain TPR_2 PF07719.17 ORF66542 - 0.03 14.4 1.0 0.094 12.9 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Ion_trans PF00520.31 ORF66542 - 0.25 10.5 16.0 0.69 9.1 16.0 1.7 1 0 0 1 1 1 0 Ion transport protein COX7C PF02935.16 ORF66542 - 1.1 9.5 3.3 3.1 8.1 1.0 2.6 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VIIc Guanylate_cyc PF00211.20 ORF64140 - 1.9e-09 37.4 0.3 4.5e-09 36.2 0.1 1.8 2 0 0 2 2 2 1 Adenylate and Guanylate cyclase catalytic domain TPR_2 PF07719.17 ORF64140 - 0.03 14.4 1.0 0.094 12.9 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Ion_trans PF00520.31 ORF64140 - 0.25 10.5 16.0 0.69 9.1 16.0 1.7 1 0 0 1 1 1 0 Ion transport protein COX7C PF02935.16 ORF64140 - 1.1 9.5 3.3 3.1 8.1 1.0 2.6 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VIIc Guanylate_cyc PF00211.20 ORF116498 - 1.9e-09 37.4 0.3 4.5e-09 36.2 0.1 1.8 2 0 0 2 2 2 1 Adenylate and Guanylate cyclase catalytic domain TPR_2 PF07719.17 ORF116498 - 0.03 14.4 1.0 0.094 12.9 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Ion_trans PF00520.31 ORF116498 - 0.25 10.5 16.0 0.69 9.1 16.0 1.7 1 0 0 1 1 1 0 Ion transport protein COX7C PF02935.16 ORF116498 - 1.1 9.5 3.3 3.1 8.1 1.0 2.6 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VIIc zf_CCCH_4 PF18345.1 ORF39162 - 3.2e-11 42.9 19.5 2e-05 24.4 6.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF39162 - 2.2e-10 40.2 12.4 5.1e-05 23.1 3.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF39162 - 1.5e-08 34.2 12.2 9.6e-05 22.1 3.5 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF39162 - 4.3e-08 33.8 16.7 2.1e-05 25.2 0.9 3.4 3 1 1 4 4 4 2 Torus domain zf-CCCH_3 PF15663.5 ORF39162 - 0.00026 21.2 1.4 0.17 12.1 0.1 2.7 2 0 0 2 2 2 2 Zinc-finger containing family gag-asp_proteas PF13975.6 ORF39162 - 0.053 14.1 0.0 0.46 11.1 0.0 2.4 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease zf-CCCH_2 PF14608.6 ORF39162 - 3.6 8.2 12.3 11 6.6 2.5 2.6 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Dynein_C PF18199.1 ORF19392 - 6.3e-110 367.2 0.0 1.1e-109 366.3 0.0 1.4 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF19392 - 5.8e-61 205.4 4.5 1.6e-60 204.0 3.8 2.1 2 0 0 2 2 2 1 ATP-binding dynein motor region AAA_lid_11 PF18198.1 ORF19392 - 4.6e-56 189.2 0.9 6.3e-56 188.7 0.1 1.7 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF19392 - 1.7e-45 153.9 0.1 1.6e-42 144.4 0.0 2.9 3 0 0 3 3 3 2 Dynein heavy chain region D6 P-loop domain zf_CCCH_4 PF18345.1 ORF130071 - 3.2e-11 42.9 19.5 2e-05 24.4 6.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 ORF130071 - 2.2e-10 40.2 12.4 5.1e-05 23.1 3.6 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF130071 - 1.5e-08 34.2 12.2 9.6e-05 22.1 3.5 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF130071 - 6.7e-08 33.2 17.2 2e-05 25.2 0.8 3.4 3 1 1 4 4 4 2 Torus domain zf-CCCH_3 PF15663.5 ORF130071 - 0.013 15.7 6.9 0.6 10.3 6.9 2.7 1 1 0 1 1 1 0 Zinc-finger containing family gag-asp_proteas PF13975.6 ORF130071 - 0.053 14.1 0.0 0.46 11.1 0.0 2.4 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease zf-CCCH_2 PF14608.6 ORF130071 - 3.6 8.2 12.3 11 6.6 2.5 2.6 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Guanylate_cyc PF00211.20 ORF62872 - 1.6e-14 53.9 0.0 2.8e-14 53.1 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Ion_trans PF00520.31 ORF62872 - 1.2e-06 28.0 7.2 2.3e-06 27.0 7.2 1.4 1 0 0 1 1 1 1 Ion transport protein DUF1673 PF07895.11 ORF62872 - 0.06 13.0 0.0 0.19 11.4 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) ubiquitin PF00240.23 ORF27876 - 8.6e-15 54.3 0.3 2.1e-14 53.0 0.3 1.7 1 0 0 1 1 1 1 Ubiquitin family DUF2407 PF10302.9 ORF27876 - 1e-05 26.1 0.4 8.9e-05 23.0 0.4 2.7 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain Rad60-SLD PF11976.8 ORF27876 - 0.011 15.6 1.0 0.024 14.5 1.0 1.6 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF27876 - 0.077 13.5 0.4 0.18 12.2 0.4 1.6 1 0 0 1 1 1 0 Ubiquitin-like domain Glyco_hydro_38N PF01074.22 ORF46906 - 3.7e-57 193.9 4.4 7.5e-57 192.9 4.4 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF46906 - 1.1e-05 25.4 0.1 3.8e-05 23.8 0.1 1.9 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 ORF9021 - 1.9e-83 280.2 6.5 4.1e-83 279.1 6.5 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Glyco_hydro_38C PF07748.13 ORF9021 - 7.6e-22 78.4 1.1 2.1e-21 77.0 1.1 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Alpha-mann_mid PF09261.11 ORF9021 - 1.3e-16 60.5 1.3 3.8e-16 59.0 1.3 1.9 1 0 0 1 1 1 1 Alpha mannosidase middle domain NAGidase PF07555.13 ORF9021 - 0.0027 17.1 0.6 0.0027 17.1 0.6 1.8 2 0 0 2 2 2 1 beta-N-acetylglucosaminidase Glyco_hydro_38N PF01074.22 ORF75885 - 1.9e-83 280.2 6.5 4.1e-83 279.1 6.5 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Glyco_hydro_38C PF07748.13 ORF75885 - 7.6e-22 78.4 1.1 2.1e-21 77.0 1.1 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Alpha-mann_mid PF09261.11 ORF75885 - 1.3e-16 60.5 1.3 3.8e-16 59.0 1.3 1.9 1 0 0 1 1 1 1 Alpha mannosidase middle domain NAGidase PF07555.13 ORF75885 - 0.0027 17.1 0.6 0.0027 17.1 0.6 1.8 2 0 0 2 2 2 1 beta-N-acetylglucosaminidase CTD PF12815.7 ORF52850 - 8.2e-05 23.1 10.7 0.043 14.4 10.7 3.1 1 1 0 1 1 1 1 Spt5 C-terminal nonapeptide repeat binding Spt4 Kinesin PF00225.23 ORF73390 - 3.7e-108 361.4 0.6 3.7e-108 361.4 0.6 3.1 3 1 1 4 4 4 1 Kinesin motor domain Microtub_bd PF16796.5 ORF73390 - 3.5e-46 156.8 0.1 3.5e-46 156.8 0.1 3.2 3 0 0 3 3 3 1 Microtubule binding Fib_alpha PF08702.10 ORF73390 - 0.0014 18.8 7.6 0.0014 18.8 7.6 7.7 3 1 3 7 7 7 2 Fibrinogen alpha/beta chain family Kinesin PF00225.23 ORF102544 - 3.7e-108 361.4 0.6 3.7e-108 361.4 0.6 3.1 3 1 1 4 4 4 1 Kinesin motor domain Microtub_bd PF16796.5 ORF102544 - 3.5e-46 156.8 0.1 3.5e-46 156.8 0.1 3.2 3 0 0 3 3 3 1 Microtubule binding Fib_alpha PF08702.10 ORF102544 - 0.0014 18.8 7.6 0.0014 18.8 7.6 7.7 3 1 3 7 7 7 2 Fibrinogen alpha/beta chain family TED_complement PF07678.14 ORF149822 - 2.2e-20 72.9 0.0 5.9e-20 71.5 0.0 1.8 1 0 0 1 1 1 1 A-macroglobulin TED domain A2M PF00207.22 ORF149822 - 6.3e-14 51.6 0.1 1.8e-13 50.1 0.1 1.9 1 0 0 1 1 1 1 Alpha-2-macroglobulin family A2M_recep PF07677.14 ORF149822 - 2.3e-06 28.2 0.2 1.3e-05 25.8 0.2 2.3 1 0 0 1 1 1 1 A-macroglobulin receptor binding domain MG2 PF01835.19 ORF149822 - 0.00047 20.6 0.2 0.0039 17.6 0.0 2.7 2 0 0 2 2 2 1 MG2 domain Arrestin_C PF02752.22 ORF149822 - 0.058 13.8 2.8 0.1 13.1 0.3 2.7 2 0 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain fn3_5 PF06280.12 ORF149822 - 0.096 13.4 4.8 0.18 12.5 0.6 3.3 2 1 1 3 3 3 0 Fn3-like domain Glyco_hydro_30C PF17189.4 ORF149822 - 0.36 11.1 2.5 2.2 8.5 2.5 2.5 1 0 0 1 1 1 0 Glycosyl hydrolase family 30 beta sandwich domain ASH PF15780.5 ORF149822 - 0.47 10.7 2.3 1.3 9.2 0.6 2.7 2 0 0 2 2 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin TED_complement PF07678.14 ORF126266 - 2.2e-20 72.9 0.0 5.9e-20 71.5 0.0 1.8 1 0 0 1 1 1 1 A-macroglobulin TED domain A2M PF00207.22 ORF126266 - 6.2e-14 51.6 0.1 1.8e-13 50.1 0.1 1.9 1 0 0 1 1 1 1 Alpha-2-macroglobulin family A2M_recep PF07677.14 ORF126266 - 2e-06 28.4 0.2 1e-05 26.1 0.2 2.3 1 0 0 1 1 1 1 A-macroglobulin receptor binding domain MG2 PF01835.19 ORF126266 - 0.00047 20.6 0.2 0.0039 17.6 0.0 2.7 2 0 0 2 2 2 1 MG2 domain Arrestin_C PF02752.22 ORF126266 - 0.068 13.6 3.1 0.1 13.1 0.3 2.7 2 0 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain fn3_5 PF06280.12 ORF126266 - 0.074 13.7 4.5 0.22 12.2 0.8 3.3 2 1 1 3 3 3 0 Fn3-like domain Glyco_hydro_30C PF17189.4 ORF126266 - 0.34 11.2 2.5 2.2 8.5 2.5 2.6 1 0 0 1 1 1 0 Glycosyl hydrolase family 30 beta sandwich domain ASH PF15780.5 ORF126266 - 0.46 10.7 2.3 1.3 9.2 0.6 2.7 2 0 0 2 2 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Ephrin_rec_like PF07699.13 ORF74321 - 3.3e-08 33.2 10.3 6.7e-07 29.0 1.5 5.3 3 2 2 5 5 5 3 Putative ephrin-receptor like TIR_2 PF13676.6 ORF74321 - 0.0054 17.3 0.0 0.019 15.6 0.0 1.8 2 0 0 2 2 2 1 TIR domain OpuAC PF04069.12 ORF74321 - 0.27 10.8 0.0 0.45 10.1 0.0 1.3 1 0 0 1 1 1 0 Substrate binding domain of ABC-type glycine betaine transport system Glyco_hydro_38N PF01074.22 ORF59185 - 1.2e-55 189.0 6.0 2.1e-55 188.2 6.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF59185 - 1.1e-07 32.0 0.1 2.9e-07 30.5 0.1 1.8 1 0 0 1 1 1 1 Alpha mannosidase middle domain DUF4363 PF14276.6 ORF59185 - 0.16 12.1 3.0 0.13 12.4 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) Glyco_hydro_38N PF01074.22 ORF14236 - 1.2e-55 189.0 6.0 2.1e-55 188.2 6.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF14236 - 1e-07 32.0 0.1 2.9e-07 30.5 0.1 1.8 1 0 0 1 1 1 1 Alpha mannosidase middle domain DUF4363 PF14276.6 ORF14236 - 0.14 12.2 3.0 0.13 12.4 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) Glyco_hydro_38N PF01074.22 ORF108715 - 1.2e-55 189.0 6.0 2.1e-55 188.2 6.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF108715 - 1e-07 32.0 0.1 2.9e-07 30.5 0.1 1.8 1 0 0 1 1 1 1 Alpha mannosidase middle domain DUF4363 PF14276.6 ORF108715 - 0.14 12.2 3.0 0.13 12.4 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) Glyco_hydro_38N PF01074.22 ORF140064 - 1.8e-55 188.4 5.8 3.1e-55 187.6 5.8 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF140064 - 1e-07 32.0 0.1 2.9e-07 30.5 0.1 1.8 1 0 0 1 1 1 1 Alpha mannosidase middle domain DUF4363 PF14276.6 ORF140064 - 0.14 12.3 3.0 0.13 12.4 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) Glyco_hydro_38N PF01074.22 ORF33309 - 1.4e-53 182.1 3.0 3.2e-53 181.0 3.0 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF33309 - 2.2e-05 24.5 0.0 7.3e-05 22.8 0.0 2.0 1 0 0 1 1 1 1 Alpha mannosidase middle domain Kinesin PF00225.23 ORF29868 - 5.7e-100 334.5 0.3 5.7e-100 334.5 0.3 2.5 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF29868 - 2.3e-18 66.6 0.1 2.3e-18 66.6 0.1 3.6 2 2 0 3 3 3 1 Microtubule binding FHA PF00498.26 ORF29868 - 0.0059 16.9 0.0 0.021 15.1 0.0 2.0 1 0 0 1 1 1 1 FHA domain DDHD PF02862.17 ORF29868 - 0.6 10.2 6.8 0.18 11.9 2.8 2.3 2 0 0 2 2 2 0 DDHD domain Ndc1_Nup PF09531.10 ORF29868 - 1.5 7.4 6.9 2.4 6.8 6.9 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PMC2NT PF08066.12 ORF29868 - 9.9 6.9 10.8 2 9.1 0.2 3.7 2 1 1 3 3 3 0 PMC2NT (NUC016) domain Kinesin PF00225.23 ORF251 - 5.7e-100 334.5 0.3 5.7e-100 334.5 0.3 2.5 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF251 - 2.3e-18 66.6 0.1 2.3e-18 66.6 0.1 3.6 2 2 0 3 3 3 1 Microtubule binding FHA PF00498.26 ORF251 - 0.0059 16.9 0.0 0.021 15.1 0.0 2.0 1 0 0 1 1 1 1 FHA domain DDHD PF02862.17 ORF251 - 0.6 10.2 6.8 0.18 11.9 2.8 2.3 2 0 0 2 2 2 0 DDHD domain Ndc1_Nup PF09531.10 ORF251 - 1.5 7.4 6.9 2.4 6.8 6.9 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PMC2NT PF08066.12 ORF251 - 9.9 6.9 10.8 2 9.1 0.2 3.7 2 1 1 3 3 3 0 PMC2NT (NUC016) domain Glyco_hydro_38N PF01074.22 ORF1041 - 7.3e-54 183.1 2.1 1.5e-53 182.1 2.1 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF1041 - 6.3e-10 39.1 0.1 1.6e-09 37.7 0.1 1.7 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 ORF76488 - 3.1e-50 171.2 6.0 5.7e-50 170.3 6.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF76488 - 1.8e-09 37.6 0.2 7e-09 35.7 0.2 2.1 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 ORF146438 - 3.1e-50 171.2 6.0 5.7e-50 170.3 6.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF146438 - 1.8e-09 37.6 0.2 7e-09 35.7 0.2 2.1 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38N PF01074.22 ORF60741 - 3.7e-80 269.4 7.5 3.7e-80 269.4 7.5 2.0 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 N-terminal domain Glyco_hydro_38C PF07748.13 ORF60741 - 1.5e-25 90.6 0.3 2.8e-25 89.7 0.3 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Alpha-mann_mid PF09261.11 ORF60741 - 2.5e-16 59.6 0.2 6.2e-16 58.3 0.2 1.7 1 0 0 1 1 1 1 Alpha mannosidase middle domain E1_dh PF00676.20 ORF30110 - 1.3e-62 211.5 0.0 2e-62 210.9 0.0 1.3 1 0 0 1 1 1 1 Dehydrogenase E1 component Transket_pyr PF02779.24 ORF30110 - 4e-62 209.1 0.0 4e-61 205.8 0.0 2.6 3 0 0 3 3 3 1 Transketolase, pyrimidine binding domain OxoGdeHyase_C PF16870.5 ORF30110 - 2.2e-48 163.8 0.0 4e-48 163.0 0.0 1.4 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal 2-oxogl_dehyd_N PF16078.5 ORF30110 - 2.9e-10 39.6 0.6 7.9e-10 38.2 0.6 1.7 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase N-terminus R2K_2 PF18299.1 ORF30110 - 0.052 13.4 0.0 0.35 10.7 0.0 2.2 2 0 0 2 2 2 0 ATP-grasp domain, R2K clade family 2 Flu_M1_C PF08289.11 ORF30110 - 0.2 11.9 0.3 0.5 10.6 0.3 1.6 1 0 0 1 1 1 0 Influenza Matrix protein (M1) C-terminal domain Dynein_C PF18199.1 ORF1509 - 1.8e-87 293.4 0.3 9.5e-87 291.1 0.0 2.1 2 0 0 2 2 2 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 ORF1509 - 1.2e-48 165.1 4.8 4.9e-48 163.2 4.0 2.2 2 0 0 2 2 2 1 ATP-binding dynein motor region AAA_lid_11 PF18198.1 ORF1509 - 5e-48 163.0 0.1 1e-47 162.0 0.1 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF1509 - 1e-36 125.6 0.2 1.4e-34 118.7 0.0 3.5 4 0 0 4 4 4 1 Dynein heavy chain region D6 P-loop domain Utp14 PF04615.13 ORF1509 - 0.67 8.5 4.2 1 7.8 4.2 1.2 1 0 0 1 1 1 0 Utp14 protein TPR_8 PF13181.6 ORF1509 - 0.77 10.1 3.8 27 5.3 0.2 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat SOAR PF16533.5 ORF1509 - 0.92 9.5 4.3 8 6.5 4.5 2.5 2 0 0 2 2 2 0 STIM1 Orai1-activating region FlgN PF05130.12 ORF1509 - 3.2 8.3 11.0 2.8 8.5 7.9 2.3 2 0 0 2 2 2 0 FlgN protein Prefoldin_2 PF01920.20 ORF1509 - 4.1 7.4 11.0 3.8 7.5 0.1 3.5 3 0 0 3 3 3 0 Prefoldin subunit DUF4092 PF13322.6 ORF116012 - 8.3e-50 169.1 0.4 1.8e-49 168.0 0.1 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4092) Peptidase_M60 PF13402.6 ORF116012 - 8.3e-45 153.4 2.6 9.4e-45 153.2 0.3 2.1 2 0 0 2 2 2 1 Peptidase M60, enhancin and enhancin-like M60-like_N PF17291.2 ORF116012 - 2.1e-15 56.6 0.1 7.2e-15 54.8 0.1 1.9 1 0 0 1 1 1 1 N-terminal domain of M60-like peptidases PQQ PF01011.21 ORF116012 - 0.0018 18.1 0.1 0.0068 16.3 0.1 2.0 1 0 0 1 1 1 1 PQQ enzyme repeat CBP_BcsQ PF06564.12 ORF150015 - 0.21 11.1 1.9 5.2 6.5 0.3 2.7 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ Meckelin PF09773.9 ORF18250 - 7.2e-155 517.3 18.0 7.2e-155 517.3 18.0 2.8 3 0 0 3 3 3 1 Meckelin (Transmembrane protein 67) cEGF PF12662.7 ORF18250 - 0.31 11.0 10.7 4.6 7.3 2.3 3.2 2 0 0 2 2 2 0 Complement Clr-like EGF-like Cation_ATPase_C PF00689.21 ORF51683 - 2.7e-44 151.0 4.0 8.2e-44 149.5 0.1 2.9 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus E1-E2_ATPase PF00122.20 ORF51683 - 8.1e-33 113.4 0.1 8.1e-33 113.4 0.1 2.4 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 ORF51683 - 2e-16 60.9 1.3 1.6e-09 38.4 0.2 3.0 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF51683 - 3.2e-13 49.6 0.4 7.1e-13 48.5 0.4 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 ORF51683 - 1.6e-06 27.7 0.0 6e-06 25.9 0.0 2.1 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 ORF51683 - 0.00015 21.6 1.6 0.00044 20.1 0.4 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase ABC_membrane_3 PF13748.6 ORF51683 - 0.014 14.7 0.3 0.014 14.7 0.3 1.7 2 0 0 2 2 2 0 ABC transporter transmembrane region HAD PF12710.7 ORF51683 - 0.014 15.8 0.1 0.085 13.2 0.1 2.2 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase PIP5K PF01504.18 ORF73470 - 3.3e-52 177.4 0.0 1.5e-51 175.3 0.0 1.9 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase C2 PF00168.30 ORF73470 - 2.4e-09 37.4 0.0 0.0018 18.5 0.0 3.0 2 1 0 2 2 2 2 C2 domain IPK PF03770.16 ORF73470 - 0.00071 19.5 0.0 0.34 10.7 0.0 2.3 2 0 0 2 2 2 2 Inositol polyphosphate kinase DUF3395 PF11875.8 ORF73470 - 0.00085 19.2 0.0 0.4 10.6 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3395) DUF3337 PF11816.8 ORF73470 - 0.037 13.9 0.0 0.065 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3337) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks3.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks3.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks3.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks3.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:10 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PDR_CDR PF06422.12 NODE_76405_length_206_cov_40.339181_g68464_i0forward_frame_2 - 0.014 15.3 1.0 1.2 9.0 0.0 2.0 1 1 1 2 2 2 0 CDR ABC transporter AstE_AspA PF04952.14 NODE_76403_length_206_cov_44.491228_g68462_i0reverse_frame_3 - 0.034 13.2 0.2 0.035 13.2 0.2 1.0 1 0 0 1 1 1 0 Succinylglutamate desuccinylase / Aspartoacylase family FOXO_KIX_bdg PF16675.5 NODE_76403_length_206_cov_44.491228_g68462_i0reverse_frame_3 - 0.1 12.9 0.4 0.13 12.5 0.4 1.3 1 1 0 1 1 1 0 KIX-binding domain of forkhead box O, CR2 SH3-RhoG_link PF16609.5 NODE_76403_length_206_cov_44.491228_g68462_i0forward_frame_2 - 0.067 12.9 1.9 0.076 12.7 1.9 1.1 1 0 0 1 1 1 0 SH3-RhoGEF linking unstructured region Mdv1 PF11542.8 NODE_76397_length_206_cov_46.777778_g68456_i0forward_frame_3 - 0.042 13.8 0.2 0.059 13.3 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial division protein 1 PV-1 PF06637.11 NODE_76395_length_206_cov_51.649123_g68454_i0reverse_frame_3 - 0.047 12.5 0.1 0.048 12.5 0.1 1.0 1 0 0 1 1 1 0 PV-1 protein (PLVAP) DUF2789 PF10982.8 NODE_76393_length_206_cov_54.555556_g68452_i0reverse_frame_3 - 0.095 12.9 0.4 0.13 12.5 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2789) UPF0146 PF03686.13 NODE_76392_length_206_cov_57.801170_g68451_i0forward_frame_3 - 0.095 12.6 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0146) Phycoerythr_ab PF02972.14 NODE_76389_length_206_cov_62.625731_g68448_i0reverse_frame_3 - 0.77 9.6 4.0 7.4 6.5 0.2 2.4 1 1 2 3 3 3 0 Phycoerythrin, alpha/beta chain Clusterin PF01093.17 NODE_76389_length_206_cov_62.625731_g68448_i0reverse_frame_2 - 4.7 6.1 8.7 4.8 6.1 8.7 1.0 1 0 0 1 1 1 0 Clusterin DUF5592 PF17332.2 NODE_76388_length_206_cov_62.935673_g68447_i0forward_frame_2 - 0.19 12.3 0.0 0.19 12.3 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5592) PHM7_ext PF12621.8 NODE_76386_length_206_cov_64.912281_g68445_i0forward_frame_2 - 0.15 12.2 0.1 0.2 11.9 0.1 1.2 1 0 0 1 1 1 0 Extracellular tail, of 10TM putative phosphate transporter Transmemb_17 PF09799.9 NODE_76385_length_206_cov_69.923977_g68444_i0reverse_frame_3 - 0.045 14.4 1.9 0.062 13.9 1.9 1.4 1 1 0 1 1 1 0 Predicted membrane protein CotJB PF12652.7 NODE_76381_length_206_cov_88.029240_g68440_i0reverse_frame_3 - 0.083 13.1 3.6 0.11 12.8 3.6 1.2 1 0 0 1 1 1 0 CotJB protein NOT2_3_5 PF04153.18 NODE_76381_length_206_cov_88.029240_g68440_i0reverse_frame_3 - 0.093 12.8 0.8 0.099 12.7 0.8 1.0 1 0 0 1 1 1 0 NOT2 / NOT3 / NOT5 family Ald_Xan_dh_C PF01315.22 NODE_76378_length_206_cov_102.023392_g68437_i0reverse_frame_2 - 0.13 12.6 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RP854 PF17460.2 NODE_76371_length_206_cov_162.988304_g68430_i0reverse_frame_2 - 0.038 13.7 0.4 0.038 13.7 0.4 1.1 1 0 0 1 1 1 0 Uncharacterized protein RP854 SIT PF15330.6 NODE_76371_length_206_cov_162.988304_g68430_i0forward_frame_2 - 0.014 15.8 0.5 0.014 15.8 0.5 1.6 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT PIRT PF15099.6 NODE_76371_length_206_cov_162.988304_g68430_i0forward_frame_2 - 0.019 14.5 3.5 0.02 14.5 3.2 1.2 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family ETRAMP PF09716.10 NODE_76371_length_206_cov_162.988304_g68430_i0forward_frame_2 - 0.024 14.7 3.9 0.024 14.7 3.9 1.9 1 1 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) TMEM154 PF15102.6 NODE_76371_length_206_cov_162.988304_g68430_i0forward_frame_2 - 0.15 12.0 2.4 0.15 12.0 2.4 1.3 1 1 0 1 1 1 0 TMEM154 protein family TMEM100 PF16311.5 NODE_76371_length_206_cov_162.988304_g68430_i0forward_frame_2 - 0.33 10.5 3.5 0.3 10.7 2.8 1.4 1 1 0 1 1 1 0 Transmembrane protein 100 zf-nanos PF05741.13 NODE_76367_length_206_cov_223.029240_g68426_i0forward_frame_3 - 0.01 16.0 0.6 0.01 16.0 0.6 1.9 2 1 0 2 2 2 0 Nanos RNA binding domain DUF3767 PF12597.8 NODE_76365_length_206_cov_303.584795_g68424_i0forward_frame_3 - 0.53 10.1 3.3 0.64 9.9 3.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) SH3_11 PF18103.1 NODE_76364_length_206_cov_331.473684_g68423_i0forward_frame_3 - 0.043 14.0 0.5 0.058 13.6 0.5 1.3 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain DUF4995 PF16386.5 NODE_76362_length_206_cov_356.286550_g68421_i0forward_frame_2 - 0.086 12.9 0.2 0.11 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF2614 PF11023.8 NODE_76360_length_206_cov_424.210526_g68419_i0forward_frame_3 - 0.0048 17.0 0.7 0.0051 16.9 0.7 1.1 1 0 0 1 1 1 1 Zinc-ribbon containing domain DUF1478 PF07349.11 NODE_76360_length_206_cov_424.210526_g68419_i0forward_frame_2 - 0.024 14.5 0.0 0.026 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1478) YMF19 PF02326.15 NODE_76358_length_206_cov_3967.450292_g68417_i0reverse_frame_2 - 1 10.2 8.0 1.3 9.9 8.0 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 ubiquitin PF00240.23 NODE_76355_length_206_cov_47885.374269_g68414_i0reverse_frame_2 - 9.3e-16 57.3 0.3 1.2e-15 57.0 0.3 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_76355_length_206_cov_47885.374269_g68414_i0reverse_frame_2 - 3.1e-06 26.9 0.1 3.6e-06 26.7 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_76355_length_206_cov_47885.374269_g68414_i0reverse_frame_2 - 0.00038 20.9 0.0 0.00041 20.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Sperm_Ag_HE2 PF05324.13 NODE_76352_length_206_cov_122279.497076_g68411_i0reverse_frame_3 - 0.14 12.6 0.0 0.17 12.4 0.0 1.1 1 0 0 1 1 1 0 Sperm antigen HE2 DUF4042 PF13251.6 NODE_76351_length_207_cov_0.750000_g68410_i0reverse_frame_3 - 0.13 12.0 0.2 0.14 11.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) VPDSG-CTERM PF18205.1 NODE_76350_length_207_cov_0.784884_g68409_i0forward_frame_2 - 6.3 6.7 15.6 3.6 7.5 3.7 2.4 2 0 0 2 2 2 0 VPDSG-CTERM motif Arm-DNA-bind_3 PF13356.6 NODE_76349_length_207_cov_0.831395_g68408_i0reverse_frame_3 - 0.55 10.6 1.8 4.1 7.9 1.8 1.9 1 1 0 1 1 1 0 Arm DNA-binding domain DPPIV_rep PF18811.1 NODE_76349_length_207_cov_0.831395_g68408_i0forward_frame_3 - 0.13 12.2 0.1 13 5.9 0.0 2.5 2 0 0 2 2 2 0 Dipeptidyl peptidase IV (DPP IV) low complexity region Toxin_6 PF05453.12 NODE_76347_length_207_cov_0.883721_g68406_i0reverse_frame_3 - 1.2 9.6 6.1 0.26 11.7 1.9 1.8 2 0 0 2 2 2 0 BmTXKS1/BmP02 toxin family Neurexophilin PF06312.12 NODE_76346_length_207_cov_0.889535_g68405_i0reverse_frame_3 - 0.97 8.9 4.1 1.2 8.5 4.1 1.2 1 0 0 1 1 1 0 Neurexophilin PRD PF00874.20 NODE_76345_length_207_cov_0.906977_g68404_i0reverse_frame_2 - 0.12 12.7 0.4 0.15 12.4 0.4 1.1 1 0 0 1 1 1 0 PRD domain K_channel_TID PF07941.11 NODE_76344_length_207_cov_0.918605_g68403_i0reverse_frame_2 - 0.039 14.4 0.1 0.052 14.0 0.1 1.3 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain Pro_racemase PF05544.11 NODE_76343_length_207_cov_0.918605_g68402_i0forward_frame_2 - 0.049 12.7 0.1 0.057 12.5 0.1 1.0 1 0 0 1 1 1 0 Proline racemase Pmp3 PF01679.17 NODE_76341_length_207_cov_0.924419_g68400_i0forward_frame_3 - 0.04 14.1 1.3 0.04 14.1 1.3 2.2 1 1 1 2 2 2 0 Proteolipid membrane potential modulator PHtD_u1 PF16645.5 NODE_76337_length_207_cov_0.930233_g68396_i0reverse_frame_3 - 0.054 13.9 0.1 0.084 13.3 0.1 1.3 1 0 0 1 1 1 0 Unstructured region on Pneumococcal histidine triad protein Metal_resist PF13801.6 NODE_76337_length_207_cov_0.930233_g68396_i0forward_frame_3 - 0.015 15.5 0.1 0.015 15.5 0.1 1.1 1 0 0 1 1 1 0 Heavy-metal resistance ApbA PF02558.16 NODE_76330_length_207_cov_0.930233_g68389_i0forward_frame_3 - 0.14 11.8 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA GP88 PF17338.2 NODE_76328_length_207_cov_0.930233_g68387_i0reverse_frame_3 - 0.018 14.5 0.0 0.02 14.3 0.0 1.0 1 0 0 1 1 1 0 Gene product 88 YceD PF02620.17 NODE_76328_length_207_cov_0.930233_g68387_i0reverse_frame_3 - 0.018 15.2 0.1 0.021 14.9 0.1 1.1 1 0 0 1 1 1 0 Large ribosomal RNA subunit accumulation protein YceD TFIIF_alpha PF05793.12 NODE_76325_length_207_cov_0.930233_g68384_i0forward_frame_2 - 4.5 5.7 5.7 4.3 5.8 5.7 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Mucin PF01456.17 NODE_76325_length_207_cov_0.930233_g68384_i0forward_frame_2 - 4.6 7.2 28.3 4.6 7.2 28.3 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF772 PF05598.11 NODE_76324_length_207_cov_0.930233_g68383_i0reverse_frame_2 - 0.042 13.9 0.0 0.048 13.7 0.0 1.3 1 0 0 1 1 1 0 Transposase domain (DUF772) F-box PF00646.33 NODE_76324_length_207_cov_0.930233_g68383_i0forward_frame_3 - 0.028 14.3 0.1 0.043 13.7 0.1 1.3 1 0 0 1 1 1 0 F-box domain RSN1_7TM PF02714.15 NODE_76322_length_207_cov_0.930233_g68381_i0reverse_frame_2 - 0.00055 19.3 2.6 0.00056 19.3 2.6 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate zf-3CxxC PF13695.6 NODE_76317_length_207_cov_0.930233_g68376_i0forward_frame_3 - 0.0067 16.9 0.2 0.0083 16.6 0.2 1.0 1 0 0 1 1 1 1 Zinc-binding domain Atrophin-1 PF03154.15 NODE_76316_length_207_cov_0.947674_g68375_i0reverse_frame_3 - 0.019 13.3 1.0 0.018 13.4 1.0 1.0 1 0 0 1 1 1 0 Atrophin-1 family Herpes_capsid PF06112.11 NODE_76315_length_207_cov_0.959302_g68374_i0forward_frame_2 - 3.1 7.8 9.7 3.6 7.6 9.7 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein TF_AP-2 PF03299.14 NODE_76314_length_207_cov_0.970930_g68373_i0forward_frame_3 - 0.068 13.1 0.0 0.073 13.0 0.0 1.0 1 0 0 1 1 1 0 Transcription factor AP-2 DUF4913 PF16259.5 NODE_76310_length_207_cov_1.040698_g68369_i0forward_frame_3 - 0.11 12.6 4.3 0.12 12.4 4.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4913) Sgf11_N PF18519.1 NODE_76308_length_207_cov_1.058140_g68367_i0reverse_frame_3 - 0.1 12.1 0.6 0.16 11.6 0.6 1.2 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain P22_portal PF16510.5 NODE_76308_length_207_cov_1.058140_g68367_i0reverse_frame_2 - 0.13 10.8 0.2 0.15 10.6 0.2 1.0 1 0 0 1 1 1 0 Phage P22-like portal protein DUF3887 PF13026.6 NODE_76305_length_207_cov_1.075581_g68364_i0reverse_frame_3 - 0.092 13.6 0.0 0.095 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3887) zf-C4_ClpX PF06689.13 NODE_76305_length_207_cov_1.075581_g68364_i0reverse_frame_2 - 0.22 11.5 0.8 0.22 11.5 0.8 1.6 2 0 0 2 2 2 0 ClpX C4-type zinc finger MCCD1 PF15707.5 NODE_76305_length_207_cov_1.075581_g68364_i0forward_frame_3 - 0.045 14.2 0.0 0.057 13.9 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial coiled-coil domain protein 1 MYCBPAP PF14646.6 NODE_76304_length_207_cov_1.075581_g68363_i0reverse_frame_3 - 0.026 13.5 0.1 0.028 13.4 0.1 1.0 1 0 0 1 1 1 0 MYCBP-associated protein family TRAM1 PF08390.11 NODE_76304_length_207_cov_1.075581_g68363_i0forward_frame_2 - 6.7 6.4 6.1 2.5 7.8 0.9 2.2 2 1 0 2 2 2 0 TRAM1-like protein tify PF06200.14 NODE_76303_length_207_cov_1.075581_g68362_i0reverse_frame_3 - 0.25 10.7 0.1 0.43 10.0 0.1 1.4 1 0 0 1 1 1 0 tify domain Vac_Fusion PF02346.16 NODE_76303_length_207_cov_1.075581_g68362_i0reverse_frame_2 - 0.15 11.7 0.6 0.19 11.4 0.6 1.2 1 0 0 1 1 1 0 Chordopoxvirus multifunctional envelope protein A27 DotD PF16816.5 NODE_76302_length_207_cov_1.081395_g68361_i0forward_frame_2 - 0.095 12.7 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 DotD protein TEX29 PF15839.5 NODE_76300_length_207_cov_1.087209_g68359_i0forward_frame_3 - 0.39 11.4 8.2 1.4 9.6 2.1 2.2 1 1 1 2 2 2 0 Testis-expressed sequence 29 protein MIS13 PF08202.11 NODE_76298_length_207_cov_1.098837_g68357_i0reverse_frame_3 - 0.035 13.4 0.1 0.037 13.3 0.1 1.1 1 0 0 1 1 1 0 Mis12-Mtw1 protein family CLLAC PF15675.5 NODE_76296_length_207_cov_1.110465_g68355_i0reverse_frame_3 - 0.71 9.5 9.7 0.38 10.3 2.7 2.4 2 0 0 2 2 2 0 CLLAC-motif containing domain Ephrin_rec_like PF07699.13 NODE_76292_length_207_cov_1.151163_g68351_i0reverse_frame_3 - 0.022 14.5 0.2 0.033 14.0 0.2 1.3 1 0 0 1 1 1 0 Putative ephrin-receptor like PhyH PF05721.13 NODE_76290_length_207_cov_1.156977_g68349_i0reverse_frame_2 - 0.031 14.5 0.3 0.034 14.4 0.3 1.1 1 0 0 1 1 1 0 Phytanoyl-CoA dioxygenase (PhyH) DtxR PF18357.1 NODE_76287_length_207_cov_1.162791_g68346_i0reverse_frame_3 - 0.13 12.0 0.1 0.2 11.3 0.1 1.3 1 0 0 1 1 1 0 Diphteria toxin repressor SH3 domain Peptidase_M6 PF05547.11 NODE_76286_length_207_cov_1.162791_g68345_i0reverse_frame_3 - 0.021 13.2 0.0 0.021 13.2 0.0 1.0 1 0 0 1 1 1 0 Immune inhibitor A peptidase M6 DUF4529 PF15032.6 NODE_76285_length_207_cov_1.162791_g68344_i0forward_frame_3 - 0.048 12.8 0.2 0.052 12.7 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4529) Glyco_hydro_65C PF03633.15 NODE_76284_length_207_cov_1.162791_g68343_i0forward_frame_2 - 0.034 14.1 0.1 0.074 13.0 0.0 1.6 2 0 0 2 2 2 0 Glycosyl hydrolase family 65, C-terminal domain bMG1 PF17970.1 NODE_76282_length_207_cov_1.162791_g68341_i0forward_frame_3 - 0.073 13.1 0.2 0.095 12.8 0.1 1.3 1 1 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG1 domain DUF3235 PF11574.8 NODE_76282_length_207_cov_1.162791_g68341_i0forward_frame_2 - 0.4 11.6 8.1 0.47 11.3 8.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3235) PRP4 PF08799.11 NODE_76275_length_207_cov_1.238372_g68334_i0reverse_frame_2 - 0.089 12.4 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 pre-mRNA processing factor 4 (PRP4) like RBR PF17208.3 NODE_76275_length_207_cov_1.238372_g68334_i0forward_frame_3 - 0.067 13.9 0.2 0.088 13.5 0.2 1.1 1 0 0 1 1 1 0 RNA binding Region XFP PF03894.15 NODE_76273_length_207_cov_1.244186_g68332_i0reverse_frame_3 - 0.089 12.5 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DCR PF14047.6 NODE_76272_length_207_cov_1.244186_g68331_i0reverse_frame_2 - 0.066 13.4 2.6 0.045 14.0 1.3 1.6 1 1 1 2 2 2 0 Dppa2/4 conserved region Cas_csx3 PF09620.10 NODE_76270_length_207_cov_1.250000_g68329_i0reverse_frame_2 - 0.28 11.1 1.7 0.91 9.5 0.3 2.0 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_csx3) Cys_rich_VLP PF14194.6 NODE_76268_length_207_cov_1.255814_g68327_i0forward_frame_2 - 0.94 9.7 6.6 4.4 7.5 0.9 2.1 1 1 1 2 2 2 0 Cysteine-rich VLP DUF4870 PF09685.10 NODE_76263_length_207_cov_1.279070_g68322_i0reverse_frame_2 - 0.0093 16.1 0.0 0.014 15.5 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4870) E3_UbLigase_EDD PF11547.8 NODE_76258_length_207_cov_1.325581_g68317_i0reverse_frame_2 - 0.2 11.4 0.1 0.27 11.0 0.1 1.2 1 0 0 1 1 1 0 E3 ubiquitin ligase EDD UPF0542 PF15086.6 NODE_76251_length_207_cov_1.377907_g68310_i0reverse_frame_3 - 0.082 12.9 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 V1R PF03402.14 NODE_76251_length_207_cov_1.377907_g68310_i0reverse_frame_2 - 0.081 12.5 0.1 0.087 12.4 0.1 1.0 1 0 0 1 1 1 0 Vomeronasal organ pheromone receptor family, V1R YdjO PF14169.6 NODE_76250_length_207_cov_1.377907_g68309_i0forward_frame_3 - 0.26 11.1 2.5 0.4 10.5 2.5 1.3 1 0 0 1 1 1 0 Cold-inducible protein YdjO UPF0560 PF10577.9 NODE_76249_length_207_cov_1.383721_g68308_i0reverse_frame_3 - 0.057 11.9 0.5 0.063 11.8 0.5 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 Peptidase_M66 PF10462.9 NODE_76249_length_207_cov_1.383721_g68308_i0forward_frame_3 - 0.13 11.2 0.0 0.13 11.2 0.0 1.0 1 0 0 1 1 1 0 Peptidase M66 Dev_Cell_Death PF10539.9 NODE_76247_length_207_cov_1.389535_g68306_i0reverse_frame_3 - 0.04 13.8 0.0 0.048 13.5 0.0 1.1 1 0 0 1 1 1 0 Development and cell death domain RecA_dep_nuc PF16786.5 NODE_76245_length_207_cov_1.389535_g68304_i0reverse_frame_2 - 0.056 13.6 0.0 0.063 13.4 0.0 1.3 1 1 0 1 1 1 0 Recombination enhancement, RecA-dependent nuclease TfuA PF07812.12 NODE_76244_length_207_cov_1.389535_g68303_i0reverse_frame_2 - 0.047 13.4 0.1 0.051 13.3 0.1 1.1 1 0 0 1 1 1 0 TfuA-like protein Vel1p PF10339.9 NODE_76244_length_207_cov_1.389535_g68303_i0reverse_frame_2 - 0.084 12.2 0.0 0.093 12.1 0.0 1.0 1 0 0 1 1 1 0 Yeast-specific zinc responsive Bact_transglu_N PF08379.10 NODE_76241_length_207_cov_1.395349_g68300_i0forward_frame_2 - 0.011 16.6 0.0 0.013 16.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial transglutaminase-like N-terminal region Zn_ribbon_17 PF17120.5 NODE_76235_length_207_cov_1.395349_g68294_i0reverse_frame_3 - 0.023 14.3 0.3 0.03 14.0 0.3 1.1 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Zn_Tnp_IS1 PF03811.13 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.00016 21.3 1.5 0.00023 20.8 1.5 1.3 1 0 0 1 1 1 1 InsA N-terminal domain Zn_Tnp_IS1595 PF12760.7 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.0003 20.7 1.5 0.00039 20.3 1.5 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain zinc_ribbon_6 PF14599.6 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.00051 20.0 0.7 0.08 13.0 0.0 2.1 2 0 0 2 2 2 2 Zinc-ribbon zinc_ribbon_9 PF14369.6 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.0011 19.1 1.8 0.59 10.5 0.4 2.2 2 0 0 2 2 2 2 zinc-ribbon Lar_restr_allev PF14354.6 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.0013 19.1 1.4 0.0013 19.1 1.4 1.5 2 0 0 2 2 2 1 Restriction alleviation protein Lar PhnA_Zn_Ribbon PF08274.12 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.022 14.7 0.5 0.12 12.3 0.0 2.0 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Cys_rich_KTR PF14205.6 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.04 13.7 1.7 2.3 8.1 0.1 2.3 2 0 0 2 2 2 0 Cysteine-rich KTR Zn-ribbon_8 PF09723.10 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.098 12.8 2.2 0.48 10.6 0.2 2.1 2 0 0 2 2 2 0 Zinc ribbon domain zf-Dof PF02701.15 NODE_76232_length_207_cov_1.395349_g68291_i0forward_frame_3 - 0.29 11.3 7.3 1.5 9.0 7.3 1.9 1 1 0 1 1 1 0 Dof domain, zinc finger K_channel_TID PF07941.11 NODE_76231_length_207_cov_1.395349_g68290_i0reverse_frame_3 - 0.049 14.1 3.2 0.058 13.9 3.2 1.1 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain FAE1_CUT1_RppA PF08392.12 NODE_76227_length_207_cov_1.436047_g68286_i0reverse_frame_2 - 0.035 13.4 0.1 0.036 13.4 0.1 1.1 1 0 0 1 1 1 0 FAE1/Type III polyketide synthase-like protein DegS PF05384.11 NODE_76227_length_207_cov_1.436047_g68286_i0forward_frame_3 - 0.064 12.8 0.1 0.07 12.6 0.1 1.0 1 0 0 1 1 1 0 Sensor protein DegS zinc_ribbon_4 PF13717.6 NODE_76220_length_207_cov_1.470930_g68279_i0reverse_frame_3 - 0.25 11.3 1.1 0.37 10.7 1.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zinc-ribbons_6 PF07191.12 NODE_76220_length_207_cov_1.470930_g68279_i0reverse_frame_2 - 0.019 14.9 4.0 0.029 14.3 4.0 1.4 1 0 0 1 1 1 0 zinc-ribbons Siva PF05458.12 NODE_76220_length_207_cov_1.470930_g68279_i0reverse_frame_2 - 0.12 12.0 6.7 0.11 12.2 6.7 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) PolC_DP2 PF03833.13 NODE_76220_length_207_cov_1.470930_g68279_i0reverse_frame_2 - 0.43 8.4 2.0 0.44 8.4 2.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF2935 PF11155.8 NODE_76216_length_207_cov_1.500000_g68275_i0reverse_frame_3 - 0.034 14.5 0.3 0.038 14.3 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) zf-BED PF02892.15 NODE_76213_length_207_cov_1.523256_g68272_i0forward_frame_2 - 0.038 14.0 0.1 0.047 13.7 0.1 1.2 1 0 0 1 1 1 0 BED zinc finger ABC1 PF03109.16 NODE_76212_length_207_cov_1.523256_g68271_i0forward_frame_2 - 5.4e-07 29.8 0.0 6.5e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 ABC1 family CCSMST1 PF15013.6 NODE_76211_length_207_cov_1.529070_g68270_i0forward_frame_2 - 0.04 14.1 0.2 0.052 13.7 0.2 1.3 1 0 0 1 1 1 0 CCSMST1 family DNA_pack_C PF02499.15 NODE_76208_length_207_cov_1.546512_g68267_i0forward_frame_2 - 0.055 12.4 0.3 0.06 12.3 0.3 1.0 1 0 0 1 1 1 0 Probable DNA packing protein, C-terminus DUF3570 PF12094.8 NODE_76206_length_207_cov_1.558140_g68265_i0reverse_frame_2 - 0.13 11.0 0.3 0.13 11.0 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3570) FBPase_glpX PF03320.13 NODE_76203_length_207_cov_1.587209_g68262_i0forward_frame_3 - 2.4e-14 52.9 0.0 2.4e-14 52.9 0.0 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded TEX15 PF15326.6 NODE_76201_length_207_cov_1.616279_g68260_i0reverse_frame_3 - 0.17 11.5 0.3 0.2 11.4 0.3 1.0 1 0 0 1 1 1 0 Testis expressed sequence 15 Lipoprotein_9 PF03180.14 NODE_76198_length_207_cov_1.622093_g68257_i0reverse_frame_2 - 7e-24 84.2 0.0 7.3e-24 84.2 0.0 1.0 1 0 0 1 1 1 1 NLPA lipoprotein Pkinase PF00069.25 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 2.2e-09 37.1 0.0 2.2e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.0086 16.0 0.0 0.0097 15.9 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.014 15.0 0.1 0.015 14.9 0.1 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase EcKinase PF02958.20 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.029 13.7 0.0 0.033 13.5 0.0 1.1 1 0 0 1 1 1 0 Ecdysteroid kinase Pkinase_Tyr PF07714.17 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.048 12.9 0.0 0.049 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase Kdo PF06293.14 NODE_76196_length_207_cov_1.622093_g68255_i0reverse_frame_3 - 0.12 11.7 0.0 0.13 11.6 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF4763 PF15960.5 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.0015 17.9 1.0 0.0015 17.9 1.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) HrpB7 PF09486.10 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.0025 18.2 0.0 0.0028 18.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) HMMR_N PF15905.5 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.009 15.5 5.0 0.009 15.5 5.0 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Cast PF10174.9 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.014 13.7 5.1 0.017 13.4 5.1 1.2 1 0 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone ATG16 PF08614.11 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.016 15.4 2.0 0.023 14.9 2.0 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Fib_alpha PF08702.10 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.018 15.2 3.1 0.034 14.3 3.1 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family TPR_MLP1_2 PF07926.12 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.02 14.9 3.6 0.088 12.9 3.6 1.8 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein VGPC1_C PF16799.5 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.037 14.0 1.8 0.97 9.5 1.0 2.2 1 1 1 2 2 2 0 C-terminal membrane-localisation domain of ion-channel, VCN1 Ivy PF08816.11 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.039 14.2 0.2 0.042 14.0 0.2 1.0 1 0 0 1 1 1 0 Inhibitor of vertebrate lysozyme (Ivy) SlyX PF04102.12 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.041 14.5 0.5 0.071 13.7 0.3 1.5 1 1 1 2 2 2 0 SlyX DUF3450 PF11932.8 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.14 11.4 2.9 0.16 11.3 2.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Wbp11 PF09429.10 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 0.34 11.3 5.6 0.59 10.6 5.6 1.4 1 1 0 1 1 1 0 WW domain binding protein 11 XhlA PF10779.9 NODE_76194_length_207_cov_1.627907_g68253_i0reverse_frame_2 - 2.9 8.2 7.1 9 6.6 0.7 2.1 1 1 1 2 2 2 0 Haemolysin XhlA DUF480 PF04337.12 NODE_76188_length_207_cov_1.662791_g68247_i0reverse_frame_3 - 0.084 13.0 0.0 0.094 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF480 Ion_trans PF00520.31 NODE_76188_length_207_cov_1.662791_g68247_i0forward_frame_3 - 1.7e-08 34.0 3.0 1.8e-08 33.9 3.0 1.0 1 0 0 1 1 1 1 Ion transport protein Lamprin PF06403.11 NODE_76187_length_207_cov_1.662791_g68246_i0forward_frame_2 - 0.69 9.9 4.3 1.5 8.8 4.3 1.6 1 1 0 1 1 1 0 Lamprin PTR PF12789.7 NODE_76185_length_207_cov_1.674419_g68244_i0reverse_frame_3 - 0.0015 18.5 4.1 0.0024 17.9 4.1 1.4 1 0 0 1 1 1 1 Phage tail repeat like XET_C PF06955.12 NODE_76177_length_207_cov_1.726744_g68236_i0reverse_frame_3 - 0.11 12.3 0.8 0.22 11.4 0.8 1.4 1 0 0 1 1 1 0 Xyloglucan endo-transglycosylase (XET) C-terminus DNA_pol3_theta PF06440.11 NODE_76176_length_207_cov_1.732558_g68235_i0forward_frame_2 - 2.8e-17 62.1 0.1 3.7e-17 61.8 0.1 1.2 1 0 0 1 1 1 1 DNA polymerase III, theta subunit He_PIG PF05345.12 NODE_76176_length_207_cov_1.732558_g68235_i0forward_frame_2 - 0.29 11.3 0.3 0.47 10.7 0.3 1.2 1 0 0 1 1 1 0 Putative Ig domain FUSC PF04632.12 NODE_76174_length_207_cov_1.744186_g68233_i0reverse_frame_3 - 2.8 6.4 5.8 3.2 6.2 5.8 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family ABC2_membrane PF01061.24 NODE_76173_length_207_cov_1.750000_g68232_i0forward_frame_2 - 3e-07 30.1 0.5 3.4e-07 29.9 0.5 1.0 1 0 0 1 1 1 1 ABC-2 type transporter FlgT_N PF16548.5 NODE_76171_length_207_cov_1.761628_g68230_i0reverse_frame_2 - 0.05 14.2 0.2 0.053 14.1 0.2 1.1 1 0 0 1 1 1 0 Flagellar assembly protein T, N-terminal domain Axin_b-cat_bind PF08833.10 NODE_76170_length_207_cov_1.761628_g68229_i0reverse_frame_2 - 0.26 11.4 2.5 0.23 11.6 0.9 1.8 1 1 1 2 2 2 0 Axin beta-catenin binding domain EutH PF04346.12 NODE_76169_length_207_cov_1.767442_g68228_i0forward_frame_2 - 0.019 14.2 0.7 0.021 14.0 0.7 1.0 1 0 0 1 1 1 0 Ethanolamine utilisation protein, EutH DUF1029 PF06269.12 NODE_76166_length_207_cov_1.779070_g68225_i0reverse_frame_3 - 0.053 13.6 2.3 0.073 13.2 2.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1029) MSL1_dimer PF16801.5 NODE_76165_length_207_cov_1.779070_g68224_i0forward_frame_2 - 0.037 13.8 1.1 0.079 12.7 1.1 1.6 1 0 0 1 1 1 0 Dimerisation domain of Male-specific-Lethal 1 WD40 PF00400.32 NODE_76164_length_207_cov_1.779070_g68223_i0reverse_frame_2 - 4.7e-06 27.2 0.3 7.7e-06 26.6 0.3 1.4 1 1 0 1 1 1 1 WD domain, G-beta repeat Halogen_Hydrol PF10112.9 NODE_76162_length_207_cov_1.790698_g68221_i0forward_frame_2 - 0.068 13.2 0.3 0.072 13.1 0.3 1.1 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Rhodanese_C PF12368.8 NODE_76159_length_207_cov_1.813953_g68218_i0forward_frame_2 - 7 7.1 13.6 18 5.8 13.6 1.7 1 1 0 1 1 1 0 Rhodanase C-terminal MFS_1 PF07690.16 NODE_76155_length_207_cov_1.854651_g68214_i0reverse_frame_3 - 0.008 15.1 5.8 0.0087 15.0 5.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 NODE_76155_length_207_cov_1.854651_g68214_i0reverse_frame_3 - 0.017 14.0 4.5 0.018 13.9 4.5 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter Pox_E10 PF04805.12 NODE_76155_length_207_cov_1.854651_g68214_i0forward_frame_3 - 0.067 13.1 0.2 0.083 12.8 0.2 1.2 1 0 0 1 1 1 0 E10-like protein conserved region THF_DHG_CYH PF00763.23 NODE_76153_length_207_cov_1.860465_g68212_i0forward_frame_3 - 0.049 13.9 0.1 0.057 13.7 0.1 1.0 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain cNMPbd_u2 PF16643.5 NODE_76152_length_207_cov_1.860465_g68211_i0forward_frame_2 - 0.014 15.8 2.2 0.017 15.6 2.2 1.0 1 0 0 1 1 1 0 Unstructured region on cNMP-binding protein Pox_A32 PF04665.12 NODE_76150_length_207_cov_1.866279_g68209_i0forward_frame_3 - 0.06 12.8 0.1 0.061 12.8 0.1 1.1 1 0 0 1 1 1 0 Poxvirus A32 protein DUF5333 PF17267.2 NODE_76148_length_207_cov_1.889535_g68207_i0forward_frame_3 - 0.075 13.2 0.1 0.086 13.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5333) Med3 PF11593.8 NODE_76145_length_207_cov_1.930233_g68204_i0forward_frame_2 - 4.9 6.2 5.8 5.2 6.2 5.8 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Kinesin PF00225.23 NODE_76139_length_207_cov_1.988372_g68198_i0reverse_frame_2 - 2.4e-22 79.3 0.4 2.7e-22 79.1 0.4 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_76139_length_207_cov_1.988372_g68198_i0reverse_frame_2 - 2.7e-16 59.8 0.3 3.1e-16 59.6 0.3 1.0 1 0 0 1 1 1 1 Microtubule binding Bac_DnaA PF00308.18 NODE_76139_length_207_cov_1.988372_g68198_i0reverse_frame_2 - 0.0022 17.8 0.1 0.0025 17.7 0.1 1.0 1 0 0 1 1 1 1 Bacterial dnaA protein ResIII PF04851.15 NODE_76139_length_207_cov_1.988372_g68198_i0reverse_frame_2 - 0.046 13.7 0.1 0.052 13.6 0.1 1.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit FhuF_C PF11575.8 NODE_76139_length_207_cov_1.988372_g68198_i0forward_frame_3 - 9 6.3 9.2 1.5 8.8 4.4 2.0 2 0 0 2 2 2 0 FhuF 2Fe-2S C-terminal domain DEAD PF00270.29 NODE_76137_length_207_cov_2.029070_g68196_i0forward_frame_2 - 1e-11 44.9 0.0 1.2e-11 44.7 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase SH3_7 PF12914.7 NODE_76136_length_207_cov_2.034884_g68195_i0reverse_frame_3 - 0.041 14.0 0.0 0.054 13.7 0.0 1.1 1 0 0 1 1 1 0 SH3 domain of SH3b2 type A2L_zn_ribbon PF08792.10 NODE_76136_length_207_cov_2.034884_g68195_i0reverse_frame_2 - 0.088 12.5 0.3 0.13 12.0 0.3 1.3 1 0 0 1 1 1 0 A2L zinc ribbon domain DUF1835 PF08874.10 NODE_76132_length_207_cov_2.087209_g68191_i0reverse_frame_2 - 0.12 12.6 0.1 0.12 12.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1835) EAV_GS PF01309.18 NODE_76126_length_207_cov_2.145349_g68185_i0forward_frame_2 - 0.082 12.5 0.9 0.095 12.3 0.9 1.1 1 0 0 1 1 1 0 Equine arteritis virus small envelope glycoprotein DUF1658 PF07871.11 NODE_76125_length_207_cov_2.151163_g68184_i0forward_frame_3 - 0.014 15.3 1.9 0.033 14.1 1.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1658) DUF1509 PF07420.11 NODE_76122_length_207_cov_2.180233_g68181_i0reverse_frame_3 - 3.9 6.3 11.7 0.19 10.6 5.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1509) Imm41 PF15592.6 NODE_76121_length_207_cov_2.186047_g68180_i0reverse_frame_2 - 0.017 15.4 0.5 0.019 15.3 0.5 1.1 1 0 0 1 1 1 0 Immunity protein 41 DUF3496 PF12001.8 NODE_76119_length_207_cov_2.226744_g68178_i0reverse_frame_3 - 0.02 15.3 0.3 0.021 15.2 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) DUF1153 PF06627.11 NODE_76116_length_207_cov_2.244186_g68175_i0reverse_frame_3 - 0.084 13.0 0.0 0.097 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1153) zf-C2H2_11 PF16622.5 NODE_76112_length_207_cov_2.261628_g68171_i0forward_frame_3 - 0.0033 17.1 0.2 0.0059 16.3 0.2 1.4 1 0 0 1 1 1 1 zinc-finger C2H2-type OS-D PF03392.13 NODE_76112_length_207_cov_2.261628_g68171_i0forward_frame_3 - 0.031 14.3 0.1 0.035 14.2 0.1 1.1 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D zf-C2H2_3 PF13878.6 NODE_76112_length_207_cov_2.261628_g68171_i0forward_frame_3 - 0.042 13.7 0.1 0.082 12.7 0.1 1.5 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO DUF2193 PF09959.9 NODE_76108_length_207_cov_2.296512_g68167_i0forward_frame_2 - 0.78 8.1 4.5 0.91 7.9 4.5 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2193) TIR PF01582.20 NODE_76105_length_207_cov_2.319767_g68164_i0forward_frame_2 - 0.16 11.8 0.1 0.16 11.8 0.1 1.2 1 0 0 1 1 1 0 TIR domain Ldl_recept_a PF00057.18 NODE_76103_length_207_cov_2.343023_g68162_i0forward_frame_3 - 0.57 10.5 5.8 4.1 7.7 0.6 2.4 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A Endomucin PF07010.12 NODE_76102_length_207_cov_2.348837_g68161_i0reverse_frame_2 - 0.07 13.1 0.0 0.081 12.9 0.0 1.0 1 0 0 1 1 1 0 Endomucin DUF3780 PF12635.7 NODE_76102_length_207_cov_2.348837_g68161_i0forward_frame_3 - 0.033 13.9 0.1 0.037 13.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3780) SH3_15 PF18346.1 NODE_76102_length_207_cov_2.348837_g68161_i0forward_frame_3 - 0.1 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Mind bomb SH3 repeat domain Ufd2P_core PF10408.9 NODE_76092_length_207_cov_2.447674_g68151_i0forward_frame_3 - 1.5e-17 63.5 0.2 1.5e-17 63.5 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin elongating factor core SCO1-SenC PF02630.14 NODE_76088_length_207_cov_2.517442_g68147_i0reverse_frame_3 - 4.3e-16 59.0 0.0 4.7e-16 58.9 0.0 1.0 1 0 0 1 1 1 1 SCO1/SenC CxC6 PF18721.1 NODE_76083_length_207_cov_2.558140_g68142_i0forward_frame_2 - 1.6 9.1 12.4 0.45 10.8 7.0 2.0 1 1 1 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases DUF3994 PF13159.6 NODE_76082_length_207_cov_2.581395_g68141_i0reverse_frame_2 - 0.054 14.0 0.0 0.066 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3994) EBP PF05241.12 NODE_76079_length_207_cov_2.656977_g68138_i0reverse_frame_3 - 0.11 11.9 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 Emopamil binding protein PHO4 PF01384.20 NODE_76079_length_207_cov_2.656977_g68138_i0forward_frame_3 - 0.043 12.9 0.4 0.047 12.7 0.4 1.0 1 0 0 1 1 1 0 Phosphate transporter family ATP13 PF12921.7 NODE_76078_length_207_cov_2.662791_g68137_i0forward_frame_2 - 0.0014 18.5 0.0 0.0015 18.4 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ATPase expression Pkinase PF00069.25 NODE_76077_length_207_cov_2.726744_g68136_i0reverse_frame_2 - 3.3e-14 52.9 0.1 3.6e-14 52.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_76077_length_207_cov_2.726744_g68136_i0reverse_frame_2 - 0.012 14.9 0.0 0.012 14.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase TAT_signal PF10518.9 NODE_76076_length_207_cov_2.767442_g68135_i0reverse_frame_2 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence PH_11 PF15413.6 NODE_76075_length_207_cov_2.779070_g68134_i0reverse_frame_3 - 0.061 13.8 0.0 0.063 13.7 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain Cyt_bd_oxida_II PF02322.15 NODE_76073_length_207_cov_2.872093_g68132_i0forward_frame_2 - 0.00085 18.8 5.4 0.00087 18.7 5.4 1.0 1 0 0 1 1 1 1 Cytochrome bd terminal oxidase subunit II ABG_transport PF03806.13 NODE_76073_length_207_cov_2.872093_g68132_i0forward_frame_2 - 0.035 12.3 0.7 0.039 12.2 0.7 1.0 1 0 0 1 1 1 0 AbgT putative transporter family Menin PF05053.13 NODE_76072_length_207_cov_2.906977_g68131_i0reverse_frame_2 - 0.082 11.3 0.0 0.096 11.0 0.0 1.0 1 0 0 1 1 1 0 Menin HTH_OrfB_IS605 PF12323.8 NODE_76063_length_207_cov_3.761628_g68122_i0reverse_frame_3 - 0.095 12.2 0.1 1.4 8.5 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain DUF2284 PF10050.9 NODE_76061_length_207_cov_3.854651_g68120_i0reverse_frame_2 - 0.47 10.2 2.6 0.55 10.0 2.6 1.1 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) VirE2 PF07229.12 NODE_76058_length_207_cov_4.052326_g68117_i0forward_frame_3 - 0.14 10.8 0.0 0.15 10.7 0.0 1.0 1 0 0 1 1 1 0 VirE2 FLYWCH PF04500.16 NODE_76055_length_207_cov_17.203488_g68114_i0reverse_frame_2 - 0.42 10.8 5.8 0.69 10.1 5.8 1.5 1 0 0 1 1 1 0 FLYWCH zinc finger domain TOM20_plant PF06552.12 NODE_76054_length_207_cov_19.110465_g68113_i0reverse_frame_3 - 2.8e-05 24.0 0.2 3e-05 23.9 0.2 1.0 1 0 0 1 1 1 1 Plant specific mitochondrial import receptor subunit TOM20 PigN PF04987.14 NODE_76054_length_207_cov_19.110465_g68113_i0forward_frame_2 - 0.82 8.5 5.2 0.86 8.4 5.2 1.0 1 0 0 1 1 1 0 Phosphatidylinositolglycan class N (PIG-N) NESP55 PF06390.12 NODE_76051_length_207_cov_29.238372_g68110_i0forward_frame_2 - 0.34 10.5 3.8 0.37 10.3 3.8 1.0 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) DP PF08781.10 NODE_76050_length_207_cov_29.273256_g68109_i0reverse_frame_3 - 0.029 14.3 1.1 0.039 13.8 0.8 1.3 1 1 0 1 1 1 0 Transcription factor DP DUF3613 PF12266.8 NODE_76049_length_207_cov_30.279070_g68108_i0forward_frame_2 - 0.085 12.6 0.8 6.1 6.7 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3613) Transformer PF06495.11 NODE_76048_length_207_cov_30.325581_g68107_i0reverse_frame_2 - 0.13 12.4 12.8 0.13 12.4 12.8 1.0 1 0 0 1 1 1 0 Fruit fly transformer protein PanZ PF12568.8 NODE_76045_length_207_cov_34.627907_g68104_i0reverse_frame_3 - 0.042 13.6 0.4 0.043 13.5 0.4 1.0 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Dynamitin PF04912.14 NODE_76043_length_207_cov_34.965116_g68102_i0reverse_frame_2 - 0.0036 16.7 1.7 0.0036 16.7 1.7 1.0 1 0 0 1 1 1 1 Dynamitin OTT_1508_deam PF14441.6 NODE_76039_length_207_cov_39.691860_g68098_i0forward_frame_3 - 0.15 12.1 2.3 0.21 11.6 2.3 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase BRCC36_C PF18110.1 NODE_76039_length_207_cov_39.691860_g68098_i0forward_frame_2 - 0.00014 21.9 0.1 0.00015 21.8 0.1 1.1 1 0 0 1 1 1 1 BRCC36 C-terminal helical domain NCD3G PF07562.14 NODE_76037_length_207_cov_40.511628_g68096_i0forward_frame_3 - 0.0053 16.7 8.7 0.071 13.1 2.2 2.2 2 0 0 2 2 2 2 Nine Cysteines Domain of family 3 GPCR Fer4 PF00037.27 NODE_76037_length_207_cov_40.511628_g68096_i0forward_frame_3 - 0.15 12.0 3.3 5.7 6.9 0.1 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain Ephrin_rec_like PF07699.13 NODE_76037_length_207_cov_40.511628_g68096_i0forward_frame_3 - 0.31 10.8 12.3 0.88 9.4 8.0 2.6 1 1 1 2 2 2 0 Putative ephrin-receptor like Fer4_6 PF12837.7 NODE_76037_length_207_cov_40.511628_g68096_i0forward_frame_3 - 1.8 8.8 6.6 24 5.2 0.1 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain GCM PF03615.15 NODE_76036_length_207_cov_41.901163_g68095_i0forward_frame_3 - 0.19 11.6 2.6 0.19 11.6 2.6 1.0 1 0 0 1 1 1 0 GCM motif protein Jas PF16135.5 NODE_76035_length_207_cov_43.093023_g68094_i0forward_frame_2 - 0.0053 16.9 0.1 0.0069 16.5 0.1 1.2 1 0 0 1 1 1 1 TPL-binding domain in jasmonate signalling # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks400.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks400.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks400.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks400.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4202 PF13875.6 NODE_76034_length_207_cov_43.209302_g68093_i0reverse_frame_2 - 0.3 11.0 1.0 0.34 10.8 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4202) Phage_holin_3_6 PF07332.11 NODE_76034_length_207_cov_43.209302_g68093_i0forward_frame_2 - 3.9 7.5 6.1 4.3 7.4 6.1 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III VSP PF03302.13 NODE_76033_length_207_cov_43.680233_g68092_i0forward_frame_3 - 4.9e-05 22.4 3.5 4.9e-05 22.4 3.5 1.0 1 0 0 1 1 1 1 Giardia variant-specific surface protein DDRGK PF09756.9 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_3 - 2.4 7.7 15.4 2.7 7.5 15.4 1.1 1 0 0 1 1 1 0 DDRGK domain DUF3886 PF13025.6 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_3 - 3.8 7.8 20.9 0.71 10.1 14.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3886) TAP42 PF04177.12 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_3 - 4.2 6.4 12.4 5.1 6.1 12.4 1.1 1 0 0 1 1 1 0 TAP42-like family Pox_Ag35 PF03286.14 NODE_76026_length_207_cov_53.116279_g68085_i0reverse_frame_3 - 9.7 5.9 11.7 11 5.7 11.7 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Cnd1_N PF12922.7 NODE_76025_length_207_cov_54.250000_g68084_i0reverse_frame_2 - 0.0061 16.4 0.9 0.008 16.0 0.9 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1, N-term PCYCGC PF13798.6 NODE_76025_length_207_cov_54.250000_g68084_i0forward_frame_3 - 0.013 15.4 0.4 0.015 15.2 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function with PCYCGC motif Mito_carr PF00153.27 NODE_76022_length_207_cov_61.569767_g68081_i0reverse_frame_2 - 0.031 14.2 0.0 0.042 13.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial carrier protein DUF2275 PF10039.9 NODE_76022_length_207_cov_61.569767_g68081_i0reverse_frame_2 - 0.14 12.3 0.0 0.15 12.2 0.0 1.0 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2275) Serinc PF03348.15 NODE_76016_length_207_cov_71.581395_g68075_i0reverse_frame_2 - 0.1 11.5 0.1 0.1 11.5 0.1 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) YIF1 PF03878.15 NODE_76015_length_207_cov_74.912791_g68074_i0reverse_frame_3 - 0.14 11.7 2.6 0.13 11.7 2.6 1.0 1 0 0 1 1 1 0 YIF1 MCLC PF05934.11 NODE_76015_length_207_cov_74.912791_g68074_i0forward_frame_2 - 2.6 6.7 5.7 2.4 6.8 5.7 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Uteroglobin PF01099.17 NODE_76014_length_207_cov_75.697674_g68073_i0forward_frame_2 - 0.066 13.5 3.1 0.078 13.3 3.1 1.2 1 0 0 1 1 1 0 Uteroglobin family zf-C2H2 PF00096.26 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 3.7e-06 27.1 2.5 5.9e-06 26.4 2.5 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 9.5e-06 26.0 1.7 1.5e-05 25.4 1.7 1.4 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.00045 20.4 2.6 0.00066 19.9 2.6 1.3 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.00077 19.4 1.5 0.0011 18.9 1.5 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.001 19.4 4.7 0.17 12.3 0.4 2.3 2 0 0 2 2 2 2 Zinc-finger double domain zf-met PF12874.7 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.0012 19.2 1.9 0.002 18.4 1.9 1.4 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-Di19 PF05605.12 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.0023 18.2 0.3 0.0031 17.8 0.3 1.2 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-BED PF02892.15 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.0024 17.9 2.6 0.0032 17.4 2.6 1.2 1 0 0 1 1 1 1 BED zinc finger Actin_micro PF17003.5 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.0058 15.9 0.5 0.0059 15.8 0.5 1.1 1 0 0 1 1 1 1 Putative actin-like family zf-DBF PF07535.12 NODE_76011_length_207_cov_86.540698_g68070_i0reverse_frame_2 - 0.046 13.8 1.0 0.081 13.0 1.0 1.4 1 0 0 1 1 1 0 DBF zinc finger HEV_ORF1 PF02444.16 NODE_76007_length_207_cov_91.895349_g68066_i0forward_frame_2 - 0.043 14.4 0.0 0.049 14.2 0.0 1.0 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) zf-P11 PF03854.14 NODE_76006_length_207_cov_93.453488_g68065_i0reverse_frame_2 - 0.15 11.8 1.7 0.26 11.0 1.7 1.3 1 0 0 1 1 1 0 P-11 zinc finger Rsm1 PF08600.10 NODE_76000_length_207_cov_111.604651_g68059_i0forward_frame_3 - 1.6 8.9 9.3 4.6 7.5 1.5 2.1 1 1 1 2 2 2 0 Rsm1-like TraF PF13728.6 NODE_75998_length_207_cov_112.744186_g68057_i0forward_frame_3 - 0.035 13.9 0.7 0.042 13.7 0.7 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein NACHT PF05729.12 NODE_75996_length_207_cov_130.087209_g68055_i0forward_frame_3 - 0.023 14.6 0.8 0.027 14.4 0.8 1.0 1 0 0 1 1 1 0 NACHT domain 2OG-FeII_Oxy PF03171.20 NODE_75991_length_207_cov_228.912791_g68050_i0forward_frame_3 - 0.15 12.5 0.0 0.93 10.0 0.0 1.8 1 1 1 2 2 2 0 2OG-Fe(II) oxygenase superfamily PIGA PF08288.12 NODE_75989_length_207_cov_274.255814_g68048_i0forward_frame_3 - 0.15 12.7 0.0 0.18 12.4 0.0 1.1 1 0 0 1 1 1 0 PIGA (GPI anchor biosynthesis) DDHD PF02862.17 NODE_75986_length_207_cov_625.895349_g68045_i0forward_frame_3 - 0.09 12.9 0.0 0.097 12.8 0.0 1.0 1 0 0 1 1 1 0 DDHD domain DUF5367 PF17329.2 NODE_75984_length_207_cov_111783.494186_g68043_i0forward_frame_3 - 0.12 12.5 0.2 0.14 12.3 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5367) Vpu PF00558.19 NODE_75984_length_207_cov_111783.494186_g68043_i0forward_frame_3 - 4.3 7.2 6.9 4.1 7.2 0.7 2.0 1 1 1 2 2 2 0 Vpu protein FAM35_C PF15793.5 ORF99400 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF99400 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain TcpS PF17456.2 ORF99359 - 0.0026 17.8 0.3 0.003 17.6 0.3 1.0 1 0 0 1 1 1 1 Toxin-coregulated pilus protein S BChl_A PF02327.17 ORF99359 - 0.017 13.9 0.0 0.018 13.8 0.0 1.0 1 0 0 1 1 1 0 Bacteriochlorophyll A protein Lentivirus_VIF PF05851.11 ORF9912 - 0.058 12.3 0.1 0.06 12.2 0.1 1.1 1 0 0 1 1 1 0 Lentivirus virion infectivity factor (VIF) TP53IP5 PF15331.6 ORF98994 - 0.0042 17.3 0.9 0.0042 17.3 0.9 1.1 1 0 0 1 1 1 1 Cellular tumour antigen p53-inducible 5 Cas_Csx8 PF09657.10 ORF98979 - 0.0061 15.6 0.1 0.0064 15.6 0.1 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Csx8 (Cas_Csx8) Myticin-prepro PF10690.9 ORF98963 - 1.8 8.9 7.1 2.5 8.4 6.6 1.5 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel TAXi_N PF14543.6 ORF98963 - 4.3 7.5 7.5 4.7 7.4 7.5 1.0 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal FAM35_C PF15793.5 ORF98534 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF98534 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain PilP PF04351.13 ORF98434 - 0.049 13.6 0.1 0.054 13.5 0.1 1.0 1 0 0 1 1 1 0 Pilus assembly protein, PilP FXa_inhibition PF14670.6 ORF98315 - 0.00022 21.4 1.3 0.0003 21.0 1.3 1.2 1 0 0 1 1 1 1 Coagulation Factor Xa inhibitory site EGF PF00008.27 ORF98315 - 0.0023 18.2 2.4 0.0034 17.7 2.4 1.2 1 0 0 1 1 1 1 EGF-like domain Vta1 PF04652.16 ORF98099 - 0.1 12.6 3.0 0.11 12.4 3.0 1.0 1 0 0 1 1 1 0 Vta1 like Ribosomal_S11 PF00411.19 ORF98099 - 0.2 12.1 2.6 0.22 11.9 2.6 1.1 1 0 0 1 1 1 0 Ribosomal protein S11 DUF3486 PF11985.8 ORF98099 - 2.3 8.6 11.6 2.7 8.4 11.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) DUF2786 PF10979.8 ORF98099 - 2.5 8.1 16.9 25 4.9 16.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2786) HK97-gp10_like PF04883.12 ORF98099 - 7.3 7.7 9.4 14 6.8 9.4 1.6 1 1 0 1 1 1 0 Bacteriophage HK97-gp10, putative tail-component DUF1455 PF07306.11 ORF97614 - 0.0049 16.8 2.3 0.0053 16.7 2.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1455) LysE PF01810.18 ORF97220 - 5.7e-11 42.2 3.6 6.2e-11 42.1 3.6 1.0 1 0 0 1 1 1 1 LysE type translocator NhaB PF06450.12 ORF97220 - 0.034 13.0 0.1 0.037 12.9 0.1 1.0 1 0 0 1 1 1 0 Bacterial Na+/H+ antiporter B (NhaB) Ribosomal_L37ae PF01780.19 ORF96920 - 0.13 12.3 2.5 0.15 12.1 2.5 1.2 1 0 0 1 1 1 0 Ribosomal L37ae protein family CTV_P6 PF06706.11 ORF96920 - 0.97 9.2 6.1 1.1 9.0 1.7 2.2 2 0 0 2 2 2 0 Citrus tristeza virus 6-kDa protein DUF4714 PF15833.5 ORF96188 - 0.18 11.8 0.7 0.21 11.6 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) UPF0300 PF08594.10 ORF95852 - 0.16 11.2 0.1 0.16 11.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) Macscav_rec PF03523.13 ORF95300 - 0.31 11.0 2.5 0.69 9.9 1.0 2.0 2 0 0 2 2 2 0 Macrophage scavenger receptor DUF4808 PF16066.5 ORF95282 - 0.088 13.4 0.0 0.096 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4808) COX6C PF02937.15 ORF94214 - 3.5 7.8 6.5 5.6 7.2 0.9 2.1 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VIc Kp4 PF09044.10 ORF94011 - 0.15 12.1 0.1 0.18 11.9 0.1 1.1 1 0 0 1 1 1 0 Kp4 Anoct_dimer PF16178.5 ORF93956 - 0.066 12.9 1.1 0.069 12.9 1.1 1.1 1 0 0 1 1 1 0 Dimerisation domain of Ca+-activated chloride-channel, anoctamin Mpp10 PF04006.12 ORF93288 - 0.0051 15.3 0.0 0.0056 15.2 0.0 1.0 1 0 0 1 1 1 1 Mpp10 protein YqfQ PF14181.6 ORF92639 - 0.11 12.7 4.1 0.13 12.4 4.1 1.0 1 0 0 1 1 1 0 YqfQ-like protein YgbA_NO PF11756.8 ORF92570 - 0.1 13.0 0.9 0.1 13.0 0.9 1.6 2 1 0 2 2 2 0 Nitrous oxide-stimulated promoter zf-dskA_traR PF01258.17 ORF92570 - 0.11 12.5 4.9 3 7.9 0.3 2.9 3 0 0 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger DUF2312 PF10073.9 ORF92369 - 0.04 13.6 1.1 2.4 7.9 0.0 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Ac76 PF05814.11 ORF91658 - 1.4 9.0 6.9 1.7 8.7 6.6 1.4 1 1 0 1 1 1 0 Orf76 (Ac76) CN_hydrolase PF00795.22 ORF91387 - 0.06 12.7 0.1 0.068 12.5 0.1 1.0 1 0 0 1 1 1 0 Carbon-nitrogen hydrolase DUF5578 PF17741.1 ORF91365 - 0.015 14.7 0.2 0.019 14.4 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5578) DUF5532 PF17673.1 ORF90940 - 0.044 13.8 0.9 0.059 13.4 0.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5532) Pkinase PF00069.25 ORF90896 - 0.00036 20.0 0.0 0.00047 19.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Glyco_transf_41 PF13844.6 ORF90896 - 0.06 11.8 0.0 0.063 11.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 41 Collectrin PF16959.5 ORF90802 - 0.085 12.6 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter FAM35_C PF15793.5 ORF90472 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF90472 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain FAM35_C PF15793.5 ORF89376 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF89376 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain Med3 PF11593.8 ORF8936 - 0.26 10.5 0.0 0.26 10.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Zn-C2H2_12 PF18112.1 ORF89120 - 0.13 12.8 2.3 0.51 10.8 2.3 2.2 1 1 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain TipE PF16972.5 ORF8907 - 0.47 9.6 3.0 0.46 9.6 3.0 1.0 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE HH_signal PF01085.18 ORF88446 - 0.026 14.2 0.0 0.026 14.2 0.0 1.1 1 0 0 1 1 1 0 Hedgehog amino-terminal signalling domain DUF2312 PF10073.9 ORF88434 - 0.04 13.6 1.1 2.4 7.9 0.0 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) DUF2205 PF10224.9 ORF88269 - 3.4e-09 36.6 1.6 3.7e-09 36.5 1.6 1.0 1 0 0 1 1 1 1 Short coiled-coil protein TACC_C PF05010.14 ORF88269 - 0.015 15.1 1.1 0.017 15.0 1.1 1.0 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF4200 PF13863.6 ORF88269 - 0.033 14.6 0.8 0.042 14.3 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) YabA PF06156.13 ORF88269 - 0.048 14.3 0.4 0.053 14.2 0.4 1.2 1 0 0 1 1 1 0 Initiation control protein YabA PORR PF11955.8 ORF87158 - 0.0037 16.3 0.9 0.0045 16.0 0.9 1.1 1 0 0 1 1 1 1 Plant organelle RNA recognition domain DUF4858 PF16150.5 ORF87158 - 0.015 15.4 2.2 0.017 15.2 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4858) DUF2982 PF11201.8 ORF8699 - 0.0061 16.1 1.9 0.0064 16.0 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2982) Adhes-Ig_like PF09085.10 ORF8670 - 0.049 13.8 0.0 0.057 13.6 0.0 1.1 1 0 0 1 1 1 0 Adhesion molecule, immunoglobulin-like UPF0060 PF02694.15 ORF86303 - 0.11 12.8 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family Deltameth_res PF16020.5 ORF86303 - 0.18 11.7 0.0 0.28 11.1 0.0 1.2 1 0 0 1 1 1 0 Deltamethrin resistance Me-amine-dh_L PF02975.14 ORF86207 - 0.0048 17.4 6.5 0.005 17.3 6.5 1.0 1 0 0 1 1 1 1 Methylamine dehydrogenase, L chain Ank_2 PF12796.7 ORF86041 - 9.2e-05 23.0 0.1 0.00012 22.6 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF86041 - 0.00039 20.6 0.0 0.00055 20.2 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF86041 - 0.013 15.9 0.0 0.02 15.4 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeat Ank PF00023.30 ORF86041 - 0.065 13.7 0.0 0.091 13.2 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeat Sigma70_r4_2 PF08281.12 ORF86041 - 0.072 12.8 0.3 0.1 12.3 0.3 1.2 1 0 0 1 1 1 0 Sigma-70, region 4 UPA_2 PF17809.1 ORF85862 - 0.19 11.6 0.0 0.21 11.4 0.0 1.0 1 0 0 1 1 1 0 UPA domain Imm17 PF15562.6 ORF8565 - 0.023 14.6 0.4 0.032 14.1 0.4 1.3 1 0 0 1 1 1 0 Immunity protein 17 ERGIC_N PF13850.6 ORF8565 - 0.056 13.8 0.2 0.065 13.6 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) MyTH4 PF00784.17 ORF84972 - 2.2 8.8 4.5 0.51 10.9 0.3 1.8 1 1 1 2 2 2 0 MyTH4 domain DUF4601 PF15373.6 ORF84698 - 0.15 11.0 0.0 0.16 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4601) RETICULATA-like PF11891.8 ORF84553 - 0.067 13.0 0.0 0.069 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein RETICULATA-related DUF2842 PF11003.8 ORF84495 - 0.094 13.0 3.6 0.73 10.1 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2842) Mg_chelatase_C PF13335.6 ORF83651 - 0.096 13.3 0.3 0.11 13.1 0.3 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI C-terminal DUF5409 PF17421.2 ORF83270 - 0.015 16.0 0.5 0.018 15.7 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) FAM35_C PF15793.5 ORF82729 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF82729 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain INTAP PF16617.5 ORF82329 - 0.012 16.0 0.1 0.013 15.8 0.1 1.1 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region Glucosamine_iso PF01182.20 ORF82135 - 0.00015 21.7 0.0 0.00015 21.7 0.0 1.0 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DUF4778 PF16008.5 ORF81363 - 0.52 10.3 1.6 0.63 10.0 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) KilA-N PF04383.13 ORF81185 - 0.16 11.8 0.1 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 KilA-N domain FAM35_C PF15793.5 ORF81089 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF81089 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain RNHCP PF12647.7 ORF80025 - 0.013 15.4 0.6 0.017 15.1 0.5 1.3 1 1 0 1 1 1 0 RNHCP domain WHAMM-JMY_N PF15920.5 ORF79535 - 0.15 12.0 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 N-terminal of Junction-mediating and WASP homolog-associated Rhomboid_SP PF12595.8 ORF78827 - 0.15 11.4 0.9 0.17 11.3 0.9 1.1 1 0 0 1 1 1 0 Rhomboid serine protease DUF2614 PF11023.8 ORF78436 - 0.25 11.5 3.1 0.25 11.4 3.1 1.0 1 0 0 1 1 1 0 Zinc-ribbon containing domain GTP_EFTU_D3 PF03143.17 ORF78215 - 2.2e-21 76.3 0.1 2.4e-21 76.2 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain CBP_BcsS PF17036.5 ORF77961 - 0.28 11.1 2.6 1.5 8.7 0.2 2.0 1 1 1 2 2 2 0 Cellulose biosynthesis protein BcsS EppA_BapA PF07268.11 ORF77692 - 0.047 13.6 0.1 0.053 13.5 0.1 1.2 1 1 0 1 1 1 0 Exported protein precursor (EppA/BapA) SLR1-BP PF07333.12 ORF77646 - 0.022 15.2 0.4 0.026 15.0 0.4 1.2 1 0 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Cas_Csx8 PF09657.10 ORF7762 - 0.0061 15.6 0.1 0.0064 15.6 0.1 1.0 1 0 0 1 1 1 1 CRISPR-associated protein Csx8 (Cas_Csx8) DUF5305 PF17231.2 ORF77605 - 0.049 13.0 1.2 0.053 12.9 1.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) HRM PF02793.22 ORF77295 - 0.0019 18.5 1.1 0.0031 17.8 1.1 1.3 1 1 0 1 1 1 1 Hormone receptor domain Caskin1-CID PF16600.5 ORF77115 - 0.19 12.3 2.7 0.25 11.9 2.7 1.2 1 0 0 1 1 1 0 Caskin1 CASK-interaction domain MTCP1 PF08991.10 ORF76904 - 0.016 15.4 4.2 0.016 15.4 4.2 2.0 1 1 1 2 2 2 0 Mature-T-Cell Proliferation I type DUF3450 PF11932.8 ORF75875 - 0.45 9.8 7.9 0.47 9.7 7.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF1639 PF07797.14 ORF75820 - 0.12 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) ECH_1 PF00378.20 ORF75817 - 2.1e-06 27.2 0.0 2.2e-06 27.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF4091 PF13320.6 ORF75547 - 0.16 12.1 0.1 0.2 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4091) FKS1_dom1 PF14288.6 ORF75282 - 0.14 12.5 0.8 0.24 11.8 0.8 1.4 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 PET PF06297.14 ORF75024 - 0.092 13.1 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 PET Domain FANCI_S4 PF14678.6 ORF75012 - 0.2 10.7 0.1 0.21 10.7 0.1 1.0 1 0 0 1 1 1 0 FANCI solenoid 4 Sulfotransfer_2 PF03567.14 ORF74960 - 0.031 14.2 0.1 0.032 14.1 0.1 1.0 1 0 0 1 1 1 0 Sulfotransferase family Kelch_4 PF13418.6 ORF74941 - 0.67 10.0 2.7 1.8 8.7 2.7 1.8 1 1 0 1 1 1 0 Galactose oxidase, central domain HOOK PF05622.12 ORF74234 - 0.23 9.6 0.0 0.27 9.4 0.0 1.0 1 0 0 1 1 1 0 HOOK protein Ribosomal_L37ae PF01780.19 ORF73725 - 0.029 14.4 0.4 0.034 14.2 0.4 1.2 1 0 0 1 1 1 0 Ribosomal L37ae protein family zf-like PF04071.12 ORF72850 - 0.032 14.2 1.7 0.038 13.9 1.7 1.2 1 0 0 1 1 1 0 Cysteine-rich small domain HCMVantigenic_N PF12154.8 ORF72737 - 0.025 14.7 1.3 0.025 14.7 1.3 1.7 2 0 0 2 2 2 0 Glycoprotein B N-terminal antigenic domain of HCMV FAM35_C PF15793.5 ORF72678 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF72678 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain DiS_P_DiS PF06750.13 ORF72441 - 0.05 13.7 1.5 0.059 13.5 1.5 1.1 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain Mg_chelatase_C PF13335.6 ORF72426 - 0.096 13.3 0.3 0.11 13.1 0.3 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI C-terminal Herpes_LMP1 PF05297.11 ORF72379 - 0.34 10.1 1.3 0.37 9.9 1.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) SNF2_N PF00176.23 ORF72248 - 6.7e-11 41.5 0.0 7.1e-11 41.4 0.0 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF1027 PF06265.11 ORF72248 - 0.11 12.5 0.2 0.28 11.2 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1027) DEAD PF00270.29 ORF72248 - 0.15 11.8 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase FAM150 PF15129.6 ORF72066 - 0.022 14.9 0.3 0.023 14.9 0.3 1.1 1 0 0 1 1 1 0 FAM150 family DUF4914 PF16260.5 ORF72066 - 0.095 10.8 0.7 0.098 10.7 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4914) GFO_IDH_MocA PF01408.22 ORF72066 - 0.18 12.6 0.0 0.19 12.5 0.0 1.1 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold DUF3975 PF13126.6 ORF71707 - 0.028 14.9 0.3 0.03 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) Tetrabrachion PF11401.8 ORF71707 - 0.11 12.5 0.3 0.18 11.8 0.3 1.4 1 0 0 1 1 1 0 Tetrabrachion DUF1211 PF06736.11 ORF7147 - 0.048 14.1 0.3 0.063 13.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) Extensin-like_C PF06904.12 ORF71425 - 0.13 12.3 0.1 0.16 12.0 0.1 1.0 1 0 0 1 1 1 0 Extensin-like protein C-terminus LLC1 PF14945.6 ORF71017 - 0.0058 17.2 0.1 0.0068 17.0 0.1 1.1 1 0 0 1 1 1 1 Normal lung function maintenance, Low in Lung Cancer 1 protein CCD48 PF15799.5 ORF71017 - 0.095 11.0 0.2 0.097 11.0 0.2 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 Zip PF02535.22 ORF70392 - 3.3e-05 23.3 0.3 3.6e-05 23.1 0.3 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter Synaptobrevin PF00957.21 ORF70317 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin zf-Tim10_DDP PF02953.15 ORF70137 - 0.025 14.2 0.7 0.035 13.7 0.7 1.3 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Menin PF05053.13 ORF70079 - 0.29 9.4 0.1 0.28 9.5 0.1 1.0 1 0 0 1 1 1 0 Menin DASH_Ask1 PF08655.10 ORF7001 - 0.035 14.0 0.0 0.054 13.4 0.0 1.4 1 0 0 1 1 1 0 DASH complex subunit Ask1 DUF1639 PF07797.14 ORF69713 - 0.098 12.6 1.3 0.18 11.8 1.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) FAM35_C PF15793.5 ORF69299 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF69299 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain Collectrin PF16959.5 ORF68890 - 0.085 12.6 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter Cytochrome_CBB3 PF13442.6 ORF68866 - 0.033 14.5 1.3 0.057 13.7 0.0 1.8 2 0 0 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III CEP209_CC5 PF16574.5 ORF68283 - 0.0046 17.1 1.0 0.0055 16.9 1.0 1.0 1 0 0 1 1 1 1 Coiled-coil region of centrosome protein CE290 Glyco_transf_7N PF13733.6 ORF68201 - 0.084 12.5 0.1 0.084 12.5 0.1 1.2 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 TPR_11 PF13414.6 ORF6644 - 0.041 13.6 0.1 5.1 6.9 0.0 2.2 2 0 0 2 2 2 0 TPR repeat CUTL PF16557.5 ORF6643 - 0.046 13.9 0.3 0.055 13.6 0.3 1.2 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB Sgf11_N PF18519.1 ORF65176 - 1.1 8.9 6.5 6.4 6.4 0.3 2.7 2 1 1 3 3 3 0 SAGA-associated factor 11 N-terminal domain Sgf11_N PF18519.1 ORF65124 - 1.1 8.9 6.5 6.4 6.4 0.3 2.7 2 1 1 3 3 3 0 SAGA-associated factor 11 N-terminal domain zinc_ribbon_6 PF14599.6 ORF65109 - 2.1 8.5 7.1 2.1 8.4 0.3 2.3 2 1 0 2 2 2 0 Zinc-ribbon UNC-93 PF05978.16 ORF64817 - 0.033 13.9 0.6 0.037 13.7 0.6 1.1 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 DUF4091 PF13320.6 ORF64783 - 0.047 13.8 0.2 0.048 13.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4091) Barstar PF01337.18 ORF64482 - 0.14 12.2 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Barstar (barnase inhibitor) Ribosomal_S28e PF01200.18 ORF63787 - 9.9e-29 99.1 0.5 1.1e-28 99.0 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e ESF1 PF18209.1 ORF63703 - 0.14 12.1 1.8 5.1 7.1 0.3 3.0 2 1 2 4 4 4 0 Embryo surrounding factor 1 Alg14 PF08660.11 ORF62864 - 8.5e-17 61.6 0.0 9.1e-17 61.5 0.0 1.0 1 0 0 1 1 1 1 Oligosaccharide biosynthesis protein Alg14 like Aldose_epim PF01263.20 ORF62604 - 5.3e-05 22.7 0.0 5.3e-05 22.7 0.0 1.0 1 0 0 1 1 1 1 Aldose 1-epimerase DUF2769 PF10967.8 ORF62564 - 0.093 13.4 1.1 0.13 13.0 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2769) rve_3 PF13683.6 ORF62134 - 0.02 14.6 0.3 0.021 14.6 0.3 1.3 1 1 0 1 1 1 0 Integrase core domain Staygreen PF12638.7 ORF62047 - 0.19 11.5 0.0 0.25 11.1 0.0 1.3 1 1 0 1 1 1 0 Staygreen protein GWT1 PF06423.12 ORF61929 - 0.17 12.0 0.4 0.19 11.9 0.4 1.1 1 0 0 1 1 1 0 GWT1 MyTH4 PF00784.17 ORF61929 - 0.32 11.5 5.4 0.33 11.5 0.5 2.0 2 0 0 2 2 2 0 MyTH4 domain GWT1 PF06423.12 ORF61928 - 0.17 12.0 0.4 0.19 11.9 0.4 1.1 1 0 0 1 1 1 0 GWT1 MyTH4 PF00784.17 ORF61928 - 0.32 11.5 5.4 0.33 11.5 0.5 2.0 2 0 0 2 2 2 0 MyTH4 domain SAYSvFN PF10260.9 ORF61926 - 0.32 11.0 2.5 0.49 10.4 2.1 1.6 1 1 0 1 1 1 0 Uncharacterized conserved domain (SAYSvFN) FAM35_C PF15793.5 ORF61830 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF61830 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain FAM35_C PF15793.5 ORF61637 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF61637 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain DUF4778 PF16008.5 ORF61528 - 0.52 10.3 1.6 0.63 10.0 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) RAMP4 PF06624.12 ORF60782 - 0.011 15.8 1.6 0.014 15.4 1.6 1.3 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 NifW PF03206.14 ORF60609 - 0.025 15.1 0.1 0.029 14.9 0.1 1.0 1 0 0 1 1 1 0 Nitrogen fixation protein NifW PriA_C PF18074.1 ORF60609 - 0.1 13.4 0.3 0.11 13.3 0.3 1.2 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain zf-Tim10_DDP PF02953.15 ORF59567 - 1.8e-09 37.1 2.4 2e-09 36.9 2.4 1.0 1 0 0 1 1 1 1 Tim10/DDP family zinc finger DUF2740 PF10872.8 ORF59143 - 0.092 12.6 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2740) COPI_assoc PF08507.10 ORF58868 - 0.013 15.6 0.4 0.013 15.5 0.4 1.1 1 0 0 1 1 1 0 COPI associated protein DUF2878 PF11086.8 ORF58868 - 0.088 13.0 0.4 0.11 12.7 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2878) Collectrin PF16959.5 ORF5873 - 0.085 12.6 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter Pex24p PF06398.11 ORF57982 - 1.1 8.2 3.2 1.2 8.1 3.2 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin FAM35_C PF15793.5 ORF57283 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF57283 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain GMP_PDE_delta PF05351.11 ORF57266 - 1.7e-17 63.9 0.1 1.8e-17 63.8 0.1 1.0 1 0 0 1 1 1 1 GMP-PDE, delta subunit BESS PF02944.20 ORF56925 - 0.053 13.4 0.1 0.086 12.7 0.1 1.4 1 0 0 1 1 1 0 BESS motif ACTH_domain PF00976.18 ORF56535 - 5.8 7.0 6.9 1.1 9.3 0.8 2.4 2 0 0 2 2 2 0 Corticotropin ACTH domain zf-AN1 PF01428.16 ORF56500 - 0.013 15.6 2.2 0.019 15.1 2.2 1.2 1 0 0 1 1 1 0 AN1-like Zinc finger Cupin_7 PF12973.7 ORF5637 - 0.12 12.3 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 ChrR Cupin-like domain MyTH4 PF00784.17 ORF55996 - 1.3 9.5 6.9 0.48 10.9 0.5 2.0 2 0 0 2 2 2 0 MyTH4 domain NifW PF03206.14 ORF5590 - 0.023 15.2 0.0 0.026 15.0 0.0 1.1 1 0 0 1 1 1 0 Nitrogen fixation protein NifW Dpy-30 PF05186.13 ORF55877 - 4.1e-14 52.0 0.0 5e-14 51.7 0.0 1.1 1 0 0 1 1 1 1 Dpy-30 motif RIIa PF02197.17 ORF55877 - 0.1 12.3 0.1 0.15 11.8 0.1 1.2 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit PAS_10 PF13596.6 ORF55679 - 0.074 13.6 0.2 0.083 13.5 0.2 1.1 1 0 0 1 1 1 0 PAS domain DUF1289 PF06945.13 ORF55610 - 0.013 15.3 0.1 0.019 14.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) EIIBC-GUT_C PF07663.11 ORF55399 - 0.0016 18.6 0.1 0.0041 17.2 0.0 1.6 1 1 1 2 2 2 1 Sorbitol phosphotransferase enzyme II C-terminus HTH_Tnp_Mu_2 PF09039.11 ORF54954 - 0.14 12.2 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Mu DNA binding, I gamma subdomain DUF3096 PF11295.8 ORF53695 - 0.027 14.1 0.3 0.045 13.4 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3096) 2OG-FeII_Oxy_2 PF13532.6 ORF53570 - 0.048 13.8 0.0 0.048 13.8 0.0 1.0 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily CGGC PF08821.11 ORF52680 - 0.008 16.4 2.0 0.009 16.2 2.0 1.1 1 0 0 1 1 1 1 CGGC domain TTL PF03133.15 ORF51300 - 0.073 12.2 1.2 0.075 12.2 1.2 1.0 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family DUF4277 PF14104.6 ORF50393 - 0.027 14.8 0.0 0.028 14.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4277) PilX_N PF14341.6 ORF49267 - 0.23 11.4 0.1 0.38 10.7 0.1 1.3 1 0 0 1 1 1 0 PilX N-terminal zf-P11 PF03854.14 ORF487 - 0.046 13.4 4.5 2.8 7.7 4.5 2.2 1 1 0 1 1 1 0 P-11 zinc finger RHH_4 PF13467.6 ORF48335 - 0.043 13.7 0.3 0.051 13.5 0.3 1.2 1 0 0 1 1 1 0 Ribbon-helix-helix domain Med20 PF08612.11 ORF48335 - 0.097 12.0 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 TATA-binding related factor (TRF) of subunit 20 of Mediator complex DUF5090 PF17009.5 ORF47945 - 1.5 8.8 6.0 1.6 8.7 6.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) LRRC37AB_C PF14914.6 ORF47861 - 0.066 13.1 0.0 0.068 13.1 0.0 1.0 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain Mcl1_mid PF12341.8 ORF47337 - 0.023 14.1 0.3 0.023 14.0 0.3 1.0 1 0 0 1 1 1 0 Minichromosome loss protein, Mcl1, middle region Dak1_2 PF13684.6 ORF47337 - 0.05 12.7 0.0 0.06 12.4 0.0 1.0 1 0 0 1 1 1 0 Dihydroxyacetone kinase family dCMP_cyt_deam_1 PF00383.23 ORF46574 - 0.058 13.3 0.6 0.074 12.9 0.6 1.1 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region RanGAP1_C PF07834.11 ORF46376 - 0.092 12.4 0.0 0.096 12.3 0.0 1.1 1 0 0 1 1 1 0 RanGAP1 C-terminal domain Arf PF00025.21 ORF45742 - 5.7e-10 38.9 0.1 6.2e-10 38.8 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 ORF45742 - 0.0088 16.0 0.1 0.011 15.7 0.1 1.1 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain GTP_EFTU PF00009.27 ORF45742 - 0.014 15.0 0.0 0.017 14.6 0.0 1.1 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Ras PF00071.22 ORF45742 - 0.062 12.9 0.0 0.069 12.7 0.0 1.1 1 0 0 1 1 1 0 Ras family IL32 PF15225.6 ORF45582 - 0.13 12.6 0.4 0.14 12.5 0.4 1.3 1 0 0 1 1 1 0 Interleukin 32 zf-met PF12874.7 ORF4442 - 0.026 14.9 0.2 0.05 14.0 0.2 1.5 1 0 0 1 1 1 0 Zinc-finger of C2H2 type zf_Hakai PF18408.1 ORF43768 - 0.057 13.1 3.8 0.062 13.0 2.4 1.9 1 1 0 1 1 1 0 C2H2 Hakai zinc finger domain Laminin_EGF PF00053.24 ORF43526 - 0.064 13.4 1.3 0.2 11.8 1.3 1.9 1 1 0 1 1 1 0 Laminin EGF domain TP53IP5 PF15331.6 ORF43245 - 0.2 11.8 0.0 0.23 11.6 0.0 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 zf-like PF04071.12 ORF43103 - 0.032 14.2 1.7 0.038 13.9 1.7 1.2 1 0 0 1 1 1 0 Cysteine-rich small domain CDC50 PF03381.15 ORF42489 - 0.056 12.9 0.0 0.058 12.9 0.0 1.1 1 0 0 1 1 1 0 LEM3 (ligand-effect modulator 3) family / CDC50 family Aldolase_II PF00596.21 ORF42177 - 0.05 13.5 0.0 0.054 13.4 0.0 1.0 1 0 0 1 1 1 0 Class II Aldolase and Adducin N-terminal domain GBP_PSP PF02425.15 ORF42045 - 0.12 12.0 0.1 0.22 11.2 0.1 1.4 1 0 0 1 1 1 0 Paralytic/GBP/PSP peptide zf-CHC2 PF01807.20 ORF41842 - 0.1 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 CHC2 zinc finger Rax2 PF12768.7 ORF41133 - 0.15 11.5 0.2 0.15 11.5 0.2 1.1 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Tmemb_55A PF09788.9 ORF40662 - 0.29 10.2 4.2 0.34 10.0 4.2 1.0 1 0 0 1 1 1 0 Transmembrane protein 55A TMCO5 PF14992.6 ORF40662 - 3.7 7.1 5.6 3.7 7.1 5.6 1.1 1 0 0 1 1 1 0 TMCO5 family Defensin_beta_2 PF13841.6 ORF39946 - 0.11 13.0 0.6 0.11 13.0 0.6 2.5 2 1 0 2 2 2 0 Beta defensin Chloroa_b-bind PF00504.21 ORF39660 - 1.3e-07 32.3 0.1 1.3e-07 32.3 0.1 1.1 1 0 0 1 1 1 1 Chlorophyll A-B binding protein KilA-N PF04383.13 ORF39424 - 0.16 11.8 0.1 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 KilA-N domain HxlR PF01638.17 ORF38635 - 0.14 12.0 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix GSH-S_ATP PF02955.16 ORF38380 - 0.022 14.2 0.0 0.023 14.1 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain LCE6A PF15858.5 ORF37983 - 0.022 15.5 0.4 0.03 15.1 0.2 1.3 1 1 0 1 1 1 0 Late cornified envelope protein 6A family Prok-RING_2 PF14445.6 ORF37642 - 0.068 13.3 0.2 0.096 12.9 0.2 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 KilA-N PF04383.13 ORF37173 - 0.16 11.8 0.1 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 KilA-N domain m_DGTX_Dc1a_b_c PF17491.2 ORF36838 - 0.14 12.8 0.9 1.2 9.9 0.2 2.0 2 0 0 2 2 2 0 Spider Toxins mu-diguetoxin-1 a, b and c Steroid_dh PF02544.16 ORF36751 - 0.032 14.2 1.4 0.033 14.2 1.3 1.2 1 1 0 1 1 1 0 3-oxo-5-alpha-steroid 4-dehydrogenase DUF5388 PF17363.2 ORF36038 - 0.13 12.5 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5388) UPF0061 PF02696.14 ORF36001 - 0.022 13.6 0.2 0.024 13.4 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family CCER1 PF15482.6 ORF3581 - 0.64 9.9 4.2 0.71 9.7 4.2 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF3648 PF12364.8 ORF35695 - 0.057 13.6 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3648) DUF4596 PF15363.6 ORF35685 - 0.43 10.8 3.5 3.8 7.8 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4596) MyTH4 PF00784.17 ORF35370 - 0.51 10.8 4.0 6.3 7.3 0.1 2.0 2 0 0 2 2 2 0 MyTH4 domain RyR PF02026.16 ORF33622 - 0.18 12.0 0.0 0.2 11.9 0.0 1.0 1 0 0 1 1 1 0 RyR domain Collectrin PF16959.5 ORF33202 - 0.085 12.6 0.0 0.086 12.6 0.0 1.1 1 0 0 1 1 1 0 Renal amino acid transporter FAM35_C PF15793.5 ORF33170 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF33170 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain PH_11 PF15413.6 ORF32053 - 0.069 13.6 0.0 0.069 13.6 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain DNA_repr_REX1B PF14966.6 ORF3204 - 0.091 13.4 0.0 0.1 13.3 0.0 1.2 1 0 0 1 1 1 0 DNA repair REX1-B PLDc_N PF13396.6 ORF31921 - 0.13 12.2 0.5 0.17 11.8 0.0 1.5 2 0 0 2 2 2 0 Phospholipase_D-nuclease N-terminal EppA_BapA PF07268.11 ORF31853 - 0.047 13.6 0.1 0.053 13.5 0.1 1.2 1 1 0 1 1 1 0 Exported protein precursor (EppA/BapA) UME PF08064.13 ORF31772 - 0.12 12.3 0.1 0.14 12.1 0.1 1.0 1 0 0 1 1 1 0 UME (NUC010) domain ZZ PF00569.17 ORF31650 - 1.6 8.6 10.2 9 6.2 2.4 2.4 1 1 1 2 2 2 0 Zinc finger, ZZ type DUF4708 PF15813.5 ORF31361 - 0.058 12.5 0.0 0.068 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4708) P34-Arc PF04045.14 ORF30526 - 0.083 12.6 0.1 0.085 12.5 0.1 1.0 1 0 0 1 1 1 0 Arp2/3 complex, 34 kD subunit p34-Arc C5HCH PF17982.1 ORF30125 - 0.19 11.9 8.9 0.13 12.4 7.7 1.5 1 1 0 1 1 1 0 NSD Cys-His rich domain DUF2721 PF11026.8 ORF2928 - 0.043 13.7 2.1 0.051 13.5 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) HCMVantigenic_N PF12154.8 ORF29 - 0.025 14.7 1.3 0.025 14.7 1.3 1.7 2 0 0 2 2 2 0 Glycoprotein B N-terminal antigenic domain of HCMV FAM35_C PF15793.5 ORF28812 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF28812 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain Vps36-NZF-N PF16988.5 ORF28777 - 0.022 14.1 0.0 0.033 13.6 0.0 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain PsbW PF07123.12 ORF2709 - 0.14 12.1 0.3 0.15 12.1 0.3 1.1 1 0 0 1 1 1 0 Photosystem II reaction centre W protein (PsbW) VGCC_beta4Aa_N PF12052.8 ORF26981 - 0.053 13.6 0.0 0.093 12.9 0.0 1.4 1 0 0 1 1 1 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal AKAP7_NLS PF10469.9 ORF26715 - 0.041 13.8 0.9 0.044 13.7 0.9 1.0 1 0 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain DUF5425 PF17472.2 ORF26463 - 0.039 14.7 0.5 0.05 14.4 0.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5425) Radical_SAM_N PF08497.10 ORF26341 - 0.22 10.7 0.0 0.25 10.5 0.0 1.0 1 0 0 1 1 1 0 Radical SAM N-terminal TMEM52 PF14979.6 ORF26167 - 1.1 9.1 7.4 1.2 9.0 7.4 1.2 1 0 0 1 1 1 0 Transmembrane 52 zf-RING_4 PF14570.6 ORF25925 - 0.062 13.1 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain LCAT PF02450.15 ORF25681 - 0.2 10.8 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase UPF0300 PF08594.10 ORF25665 - 0.16 11.2 0.1 0.16 11.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) DUF5532 PF17673.1 ORF25304 - 0.044 13.8 0.9 0.059 13.4 0.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5532) LCE6A PF15858.5 ORF2530 - 0.022 15.5 0.4 0.03 15.1 0.2 1.3 1 1 0 1 1 1 0 Late cornified envelope protein 6A family ARL6IP6 PF15062.6 ORF24811 - 0.035 14.2 0.7 0.044 13.9 0.7 1.1 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix DUF2706 PF10913.8 ORF24487 - 0.00093 19.0 0.7 0.0013 18.5 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2706) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks401.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks401.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks401.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks401.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:39:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FAM35_C PF15793.5 ORF24334 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF24334 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain Kp4 PF09044.10 ORF24159 - 0.15 12.1 0.1 0.18 11.9 0.1 1.1 1 0 0 1 1 1 0 Kp4 CxC6 PF18721.1 ORF2383 - 0.23 11.8 5.6 0.19 12.0 3.3 2.0 1 1 1 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases UNC-93 PF05978.16 ORF23094 - 0.15 11.8 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 DUF3586 PF12131.8 ORF22940 - 0.028 14.6 0.5 0.032 14.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3586) Nup54_57_C PF18570.1 ORF22883 - 0.077 12.6 1.8 0.3 10.7 0.0 2.0 2 0 0 2 2 2 0 NUP57/Nup54 C-terminal domain DUF2165 PF09933.9 ORF22024 - 0.12 12.4 1.8 0.13 12.3 1.8 1.2 1 0 0 1 1 1 0 Predicted small integral membrane protein (DUF2165) DUF3586 PF12131.8 ORF21766 - 0.17 12.1 0.1 0.29 11.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3586) Sprouty PF05210.13 ORF21573 - 0.03 14.7 3.0 0.036 14.5 3.0 1.2 1 1 0 1 1 1 0 Sprouty protein (Spry) zf-TAZ PF02135.16 ORF21564 - 0.025 15.0 7.2 0.038 14.5 7.2 1.3 1 0 0 1 1 1 0 TAZ zinc finger Orthopox_35kD PF02250.15 ORF21442 - 0.034 13.8 0.0 0.037 13.7 0.0 1.0 1 0 0 1 1 1 0 35kD major secreted virus protein DUF572 PF04502.13 ORF21054 - 2.1e-18 67.1 2.1 2.3e-18 66.9 2.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) Gp45_2 PF17470.2 ORF20834 - 0.019 14.9 0.1 0.029 14.3 0.1 1.3 1 0 0 1 1 1 0 Phage gene product 45.2 YABBY PF04690.13 ORF2075 - 0.024 15.2 0.4 0.032 14.8 0.3 1.2 1 1 0 1 1 1 0 YABBY protein Aconitase_C PF00694.19 ORF2075 - 0.032 14.6 0.0 0.035 14.4 0.0 1.1 1 0 0 1 1 1 0 Aconitase C-terminal domain RGS12_usC PF16612.5 ORF20547 - 0.084 13.3 0.0 0.095 13.1 0.0 1.0 1 0 0 1 1 1 0 C-terminal unstructured region of RGS12 Gp_dh_C PF02800.20 ORF20477 - 0.038 13.6 0.0 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vps36-NZF-N PF16988.5 ORF20154 - 0.022 14.1 0.0 0.033 13.6 0.0 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain CxC6 PF18721.1 ORF19046 - 0.23 11.8 5.6 0.19 12.0 3.3 2.0 1 1 1 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases DUF167 PF02594.16 ORF18237 - 1.8e-14 53.6 0.0 2.1e-14 53.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Ntox27 PF15531.6 ORF17882 - 0.084 12.8 0.0 0.091 12.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 27 Baculo_PEP_N PF04512.12 ORF17811 - 0.095 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, N terminus DUF2691 PF10903.8 ORF17796 - 0.027 14.3 1.5 0.031 14.1 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2691) IRF-2BP1_2 PF11261.8 ORF17392 - 0.1 12.2 0.1 0.14 11.7 0.1 1.3 1 0 0 1 1 1 0 Interferon regulatory factor 2-binding protein zinc finger Cullin_binding PF03556.15 ORF17376 - 0.015 15.7 0.0 0.016 15.6 0.0 1.0 1 0 0 1 1 1 0 Cullin binding DUF4975 PF16346.5 ORF16996 - 0.0045 17.1 0.3 0.0059 16.7 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4975) DUF1953 PF09196.10 ORF16996 - 0.048 13.5 0.1 0.074 12.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1953) Imm51 PF15595.6 ORF16996 - 0.086 12.8 0.0 0.094 12.7 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 51 CLTH PF10607.9 ORF16943 - 0.045 13.6 1.1 0.049 13.5 1.1 1.0 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain DUF3989 PF13150.6 ORF16190 - 0.019 14.7 1.0 0.019 14.7 1.0 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3989) DM PF00751.18 ORF1608 - 0.0061 16.4 2.1 0.0087 15.9 2.1 1.3 1 0 0 1 1 1 1 DM DNA binding domain DUF3709 PF12493.8 ORF15890 - 0.13 12.3 3.7 0.89 9.6 3.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3709) FAM35_C PF15793.5 ORF15750 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF15750 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain TMEM40 PF15817.5 ORF153011 - 0.11 12.2 1.2 0.14 11.9 1.2 1.3 1 0 0 1 1 1 0 Transmembrane protein 40 family DUF3626 PF12294.8 ORF152986 - 0.13 11.3 0.4 0.13 11.3 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3626) Smoothelin PF12510.8 ORF152749 - 0.08 13.0 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Smoothelin cytoskeleton protein Ac76 PF05814.11 ORF151984 - 1.4 9.0 6.9 1.7 8.7 6.6 1.4 1 1 0 1 1 1 0 Orf76 (Ac76) PIP49_N PF14875.6 ORF151628 - 0.024 14.5 0.5 0.025 14.4 0.5 1.0 1 0 0 1 1 1 0 N-term cysteine-rich ER, FAM69 STE PF02200.16 ORF151605 - 0.039 14.4 0.1 0.043 14.3 0.1 1.0 1 0 0 1 1 1 0 STE like transcription factor QCR10 PF09796.9 ORF151336 - 0.075 13.1 0.2 0.12 12.4 0.2 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) Adeno_E3 PF06040.11 ORF151336 - 0.16 12.1 1.4 0.22 11.7 1.4 1.2 1 0 0 1 1 1 0 Adenovirus E3 protein FAM35_C PF15793.5 ORF151192 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF151192 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain NICE-1 PF15845.5 ORF149353 - 0.16 12.8 22.4 0.069 13.9 13.3 2.0 1 1 1 2 2 2 0 Cysteine-rich C-terminal 1 family CGGC PF08821.11 ORF14900 - 0.008 16.4 2.0 0.009 16.2 2.0 1.1 1 0 0 1 1 1 1 CGGC domain Sirohm_synth_M PF14824.6 ORF14870 - 0.12 11.9 0.3 0.19 11.2 0.3 1.3 1 0 0 1 1 1 0 Sirohaem biosynthesis protein central FAM35_C PF15793.5 ORF148109 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF148109 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain Synaptobrevin PF00957.21 ORF147889 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin zf_C2HC_14 PF18574.1 ORF147819 - 0.0081 15.9 0.4 0.014 15.1 0.4 1.5 1 0 0 1 1 1 1 C2HC Zing finger domain UvrD_C PF13361.6 ORF147752 - 0.12 11.7 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain SDP_N PF12278.8 ORF147579 - 0.019 15.1 1.3 0.022 14.9 1.3 1.1 1 0 0 1 1 1 0 Sex determination protein N terminal RyR PF02026.16 ORF147579 - 0.095 12.9 0.2 0.1 12.8 0.2 1.1 1 0 0 1 1 1 0 RyR domain DNA_pol_lambd_f PF10391.9 ORF147365 - 0.077 12.8 0.0 0.23 11.3 0.0 1.7 1 1 1 2 2 2 0 Fingers domain of DNA polymerase lambda DUF3989 PF13150.6 ORF146882 - 0.019 14.7 1.0 0.019 14.7 1.0 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3989) Epiglycanin_C PF14654.6 ORF14671 - 0.37 10.9 3.5 0.48 10.5 3.5 1.2 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region Epiglycanin_TR PF05647.11 ORF146283 - 0.0016 18.3 2.1 0.0022 17.9 2.1 1.2 1 0 0 1 1 1 1 Tandem-repeating region of mucin, epiglycanin-like DUF5579 PF17742.1 ORF146283 - 0.11 12.1 0.1 0.13 11.9 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5579) LapA_dom PF06305.11 ORF146246 - 0.36 10.7 1.7 0.56 10.1 1.7 1.4 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain zf-P11 PF03854.14 ORF146216 - 0.046 13.4 4.5 2.8 7.7 4.5 2.2 1 1 0 1 1 1 0 P-11 zinc finger RAMP4 PF06624.12 ORF146031 - 8.7e-21 73.8 0.1 1e-20 73.6 0.1 1.0 1 0 0 1 1 1 1 Ribosome associated membrane protein RAMP4 DUF1206 PF06724.11 ORF146031 - 0.052 13.6 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) DUF5321 PF17254.2 ORF146031 - 0.057 12.8 0.0 0.06 12.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5321) GPW_gp25 PF04965.14 ORF145853 - 0.02 14.6 0.0 0.022 14.5 0.0 1.1 1 0 0 1 1 1 0 Gene 25-like lysozyme DUF3700 PF12481.8 ORF145672 - 0.09 12.2 0.2 0.094 12.1 0.2 1.0 1 0 0 1 1 1 0 Aluminium induced protein CxC6 PF18721.1 ORF144113 - 0.23 11.8 5.6 0.19 12.0 3.3 2.0 1 1 1 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases LRR_4 PF12799.7 ORF143822 - 7.6e-12 45.2 7.0 6.6e-07 29.6 0.3 2.1 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF143822 - 1.6e-08 34.2 0.3 2.1e-08 33.8 0.3 1.1 1 0 0 1 1 1 1 Leucine rich repeat LRR_1 PF00560.33 ORF143822 - 0.0031 17.8 0.5 0.28 11.9 0.3 2.6 2 1 0 2 2 2 1 Leucine Rich Repeat LRR_6 PF13516.6 ORF143822 - 0.0069 16.4 0.9 0.056 13.5 0.2 2.4 2 0 0 2 2 2 1 Leucine Rich repeat FAM35_C PF15793.5 ORF143585 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF143585 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain FAM35_C PF15793.5 ORF143253 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF143253 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain TMPIT PF07851.13 ORF143158 - 0.024 13.9 0.3 0.026 13.8 0.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein LacI PF00356.21 ORF143158 - 0.11 12.3 0.5 2.3 8.1 0.2 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family LRRC37AB_C PF14914.6 ORF142982 - 0.066 13.1 0.0 0.068 13.1 0.0 1.0 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain 2-ph_phosp PF04029.14 ORF142796 - 0.048 12.8 0.0 0.058 12.6 0.0 1.1 1 0 0 1 1 1 0 2-phosphosulpholactate phosphatase FAM35_C PF15793.5 ORF142771 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF142771 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain DUF842 PF05811.13 ORF14239 - 0.0014 18.4 0.6 0.0016 18.1 0.6 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF842) NKAIN PF05640.14 ORF141074 - 0.01 15.1 0.4 0.012 14.9 0.4 1.1 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein DUF4974 PF16344.5 ORF140930 - 0.0023 17.9 1.1 0.0098 15.9 0.2 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4974) Vps4_C PF09336.10 ORF140930 - 0.016 15.2 0.0 0.02 14.9 0.0 1.1 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain SdpI PF13630.6 ORF139982 - 0.13 12.4 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family PAS_4 PF08448.10 ORF139858 - 0.057 13.7 0.0 0.062 13.6 0.0 1.1 1 0 0 1 1 1 0 PAS fold Defensin_beta_2 PF13841.6 ORF139812 - 0.11 13.0 0.6 0.11 13.0 0.6 2.5 2 1 0 2 2 2 0 Beta defensin ATP_transf PF09830.9 ORF139205 - 0.079 13.1 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 ATP adenylyltransferase FAM35_C PF15793.5 ORF138988 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF138988 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain Metallothio_PEC PF02068.16 ORF138429 - 0.01 16.2 2.7 0.012 15.9 2.7 1.1 1 0 0 1 1 1 1 Plant PEC family metallothionein Phage_HK97_TLTM PF06120.11 ORF13833 - 0.035 13.3 2.1 0.036 13.3 2.1 1.0 1 0 0 1 1 1 0 Tail length tape measure protein FAM35_C PF15793.5 ORF137721 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF137721 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain DUF3586 PF12131.8 ORF137544 - 0.028 14.6 0.5 0.032 14.4 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3586) NS3_envE PF02723.14 ORF13698 - 4.7 7.4 8.4 12 6.0 0.7 2.1 1 1 1 2 2 2 0 Non-structural protein NS3/Small envelope protein E FAM35_C PF15793.5 ORF13671 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF13671 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain NES_C_h PF18208.1 ORF136658 - 0.043 14.1 0.8 0.049 13.9 0.8 1.1 1 0 0 1 1 1 0 Nicking enzyme C-terminal middle helical domain CoA_binding_3 PF13727.6 ORF13544 - 0.037 14.0 1.1 0.035 14.1 1.1 1.0 1 0 0 1 1 1 0 CoA-binding domain Peptidase_C98 PF15499.6 ORF135378 - 0.14 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase DUF1107 PF06526.12 ORF134023 - 1.1e-29 102.1 0.6 1.2e-29 101.9 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1107) DUF3989 PF13150.6 ORF133754 - 0.019 14.7 1.0 0.019 14.7 1.0 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3989) Ribosomal_L37ae PF01780.19 ORF133493 - 0.029 14.4 0.4 0.034 14.2 0.4 1.2 1 0 0 1 1 1 0 Ribosomal L37ae protein family PET PF06297.14 ORF133081 - 0.092 13.1 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 PET Domain DnaJ_C PF01556.18 ORF132714 - 3.8e-05 23.8 0.5 5.3e-05 23.3 0.5 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DUF2784 PF10861.8 ORF132460 - 0.037 14.1 0.2 0.045 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF2784) FAM35_C PF15793.5 ORF132030 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF132030 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain MapZ_EC1 PF18041.1 ORF13188 - 0.001 19.3 0.6 0.0012 19.1 0.6 1.0 1 0 0 1 1 1 1 MapZ extracellular domain 1 DUF2542 PF10808.8 ORF131855 - 0.13 12.7 1.1 0.16 12.4 0.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2542) DUF2892 PF11127.8 ORF131855 - 0.18 11.8 9.9 0.32 11.1 9.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2892) PGP_phosphatase PF09419.10 ORF131704 - 1.6e-10 40.9 0.0 1.9e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial PGP phosphatase Hydrolase_like PF13242.6 ORF131704 - 6.7e-05 22.9 0.0 8.4e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like BPD_transp_1 PF00528.22 ORF131494 - 4.7e-11 42.8 1.7 5e-11 42.7 1.7 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component DUF2754 PF10953.8 ORF131494 - 0.067 13.4 0.5 0.083 13.1 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) Renin_r PF07850.14 ORF131494 - 0.1 13.2 0.2 0.11 13.2 0.2 1.2 1 0 0 1 1 1 0 Renin receptor-like protein Synaptobrevin PF00957.21 ORF131134 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin zf-RING_10 PF16685.5 ORF131115 - 0.015 15.4 0.4 0.02 15.0 0.4 1.1 1 0 0 1 1 1 0 zinc RING finger of MSL2 PP2C PF00481.21 ORF130618 - 1.1e-10 41.7 0.0 1.2e-10 41.5 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C DUF2793 PF10983.8 ORF130618 - 0.082 12.8 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2793) Sep15_SelM PF08806.11 ORF130597 - 0.066 13.4 0.6 0.098 12.8 0.2 1.6 1 1 1 2 2 2 0 Sep15/SelM redox domain MmoB_DmpM PF02406.17 ORF130522 - 0.077 13.2 0.6 0.08 13.2 0.6 1.3 1 0 0 1 1 1 0 MmoB/DmpM family Glyco_hydro_38 PF18438.1 ORF130522 - 0.16 12.0 1.9 0.21 11.7 1.9 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal domain 1 DUF1774 PF08611.10 ORF130356 - 0.034 14.4 0.1 0.034 14.4 0.1 1.2 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1774) BORA_N PF15280.6 ORF129509 - 0.054 13.1 0.0 0.062 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein aurora borealis N-terminus DUF4184 PF13803.6 ORF129355 - 0.078 12.7 0.0 0.078 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4184) Peptidase_C5 PF00770.18 ORF129242 - 0.019 14.7 0.2 0.031 14.0 0.2 1.4 1 1 0 1 1 1 0 Adenovirus endoprotease PORR PF11955.8 ORF128908 - 0.0037 16.3 0.9 0.0045 16.0 0.9 1.1 1 0 0 1 1 1 1 Plant organelle RNA recognition domain DUF4858 PF16150.5 ORF128908 - 0.015 15.4 2.2 0.017 15.2 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4858) zf-C2H2 PF00096.26 ORF128728 - 2.4e-13 49.7 8.7 1e-06 28.8 1.9 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF128728 - 3.7e-09 36.6 6.8 0.00028 21.5 1.1 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF128728 - 8e-08 32.4 12.2 3.9e-05 23.9 0.9 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF128728 - 2.1e-07 30.6 0.9 2.1e-07 30.6 0.9 2.8 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-BED PF02892.15 ORF128728 - 5.7e-05 23.1 6.6 0.0093 16.0 1.9 2.1 1 1 1 2 2 2 2 BED zinc finger zf-C2H2_11 PF16622.5 ORF128728 - 0.00013 21.7 2.7 0.0097 15.7 0.0 2.3 2 1 0 2 2 2 1 zinc-finger C2H2-type Actin_micro PF17003.5 ORF128728 - 0.00021 20.6 3.8 0.029 13.6 0.4 2.0 1 1 1 2 2 2 2 Putative actin-like family zf-met PF12874.7 ORF128728 - 0.00025 21.3 7.4 0.0072 16.7 0.4 2.6 3 0 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 ORF128728 - 0.00031 21.0 2.6 0.059 13.7 0.2 2.0 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-Di19 PF05605.12 ORF128728 - 0.0013 19.0 4.3 0.011 16.0 4.1 2.0 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_jaz PF12171.8 ORF128728 - 0.0022 18.2 1.1 0.0022 18.2 1.1 2.4 2 1 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_3rep PF18868.1 ORF128728 - 0.0035 18.0 1.1 0.027 15.1 1.1 1.9 1 1 1 2 2 2 2 Zinc finger C2H2-type, 3 repeats PyrI_C PF02748.15 ORF128728 - 0.0087 15.9 1.7 3 7.8 0.1 2.2 2 0 0 2 2 2 2 Aspartate carbamoyltransferase regulatory chain, metal binding domain C1_2 PF03107.16 ORF128728 - 0.013 15.8 5.8 0.039 14.3 0.5 2.2 2 0 0 2 2 2 0 C1 domain zf-AN1 PF01428.16 ORF128728 - 0.042 14.0 2.8 3.2 8.0 0.1 2.4 2 0 0 2 2 2 0 AN1-like Zinc finger Ribosomal_L28 PF00830.19 ORF128728 - 0.067 13.4 1.9 0.92 9.8 0.3 2.1 1 1 1 2 2 2 0 Ribosomal L28 family zf-C2HE PF16278.5 ORF128728 - 0.075 13.5 3.9 0.11 13.0 0.7 2.1 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger HNH PF01844.23 ORF128728 - 0.11 12.7 1.8 0.89 9.8 0.1 2.1 2 0 0 2 2 2 0 HNH endonuclease zf-C2H2_6 PF13912.6 ORF128728 - 1.1 9.3 12.3 1.4 9.0 1.2 2.6 2 2 0 2 2 2 0 C2H2-type zinc finger DUF2633 PF11119.8 ORF128579 - 1.2 9.1 6.8 1.8 8.6 6.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) DUF3096 PF11295.8 ORF128297 - 0.027 14.1 0.3 0.045 13.4 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3096) FAM35_C PF15793.5 ORF128089 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF128089 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain PIEZO PF15917.5 ORF126629 - 0.025 14.1 0.1 0.031 13.8 0.1 1.2 1 1 0 1 1 1 0 Piezo Formyl_trans_N PF00551.19 ORF126023 - 0.27 11.0 1.2 0.35 10.6 1.2 1.1 1 0 0 1 1 1 0 Formyl transferase TraS PF10624.9 ORF125636 - 0.034 14.1 1.4 0.031 14.2 1.4 1.0 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS OAD_gamma PF04277.13 ORF125634 - 3.8 8.2 8.9 1.8 9.2 6.7 1.6 1 1 1 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Defensin_beta_2 PF13841.6 ORF125256 - 0.11 13.0 0.6 0.11 13.0 0.6 2.5 2 1 0 2 2 2 0 Beta defensin RNHCP PF12647.7 ORF12487 - 0.013 15.4 0.6 0.017 15.1 0.5 1.3 1 1 0 1 1 1 0 RNHCP domain SepA PF17080.5 ORF124711 - 0.071 13.5 0.1 0.071 13.5 0.1 1.0 1 0 0 1 1 1 0 Multidrug Resistance efflux pump FAM35_C PF15793.5 ORF124687 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF124687 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain UCR_UQCRX_QCR9 PF05365.12 ORF123956 - 0.19 11.7 0.7 0.19 11.7 0.7 1.8 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like DUF4636 PF15468.6 ORF123093 - 0.04 13.6 2.7 0.046 13.4 2.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) LBP_C PF17386.2 ORF122679 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Lacto-N-biose phosphorylase C-terminal domain Sec3_C_2 PF15278.6 ORF121734 - 0.13 12.6 0.0 0.16 12.3 0.0 1.0 1 0 0 1 1 1 0 Sec3 exocyst complex subunit IL32 PF15225.6 ORF121471 - 0.1 13.0 0.7 0.17 12.3 0.7 1.4 1 1 1 2 2 2 0 Interleukin 32 Herpes_gE PF02480.16 ORF119733 - 0.064 12.0 0.4 0.071 11.9 0.4 1.1 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E Ribosomal_L40e PF01020.17 ORF118880 - 0.009 15.9 0.2 0.009 15.9 0.2 1.6 2 0 0 2 2 2 1 Ribosomal L40e family Casein PF00363.18 ORF118873 - 0.066 13.6 1.6 0.28 11.6 0.3 2.0 2 0 0 2 2 2 0 Casein DUF4601 PF15373.6 ORF118334 - 0.15 11.0 0.0 0.16 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4601) Glyco_hydro_42C PF08533.10 ORF117989 - 0.17 11.6 0.4 1.8 8.4 0.4 2.0 1 1 0 1 1 1 0 Beta-galactosidase C-terminal domain Tfb5 PF06331.12 ORF117772 - 9e-13 48.0 0.1 1.1e-12 47.7 0.1 1.0 1 0 0 1 1 1 1 Transcription factor TFIIH complex subunit Tfb5 DUF3096 PF11295.8 ORF117201 - 0.027 14.1 0.3 0.045 13.4 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3096) UPA_2 PF17809.1 ORF11679 - 0.19 11.6 0.0 0.21 11.4 0.0 1.0 1 0 0 1 1 1 0 UPA domain HCV_NS4b PF01001.19 ORF116755 - 0.12 12.0 0.1 0.14 11.8 0.1 1.0 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS4b Peptidase_C98 PF15499.6 ORF115896 - 0.14 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase Luteo_Vpg PF01659.16 ORF115582 - 0.024 14.9 0.8 0.028 14.8 0.8 1.0 1 0 0 1 1 1 0 Luteovirus putative VPg genome linked protein GWT1 PF06423.12 ORF115294 - 0.17 12.0 0.4 0.19 11.9 0.4 1.1 1 0 0 1 1 1 0 GWT1 MyTH4 PF00784.17 ORF115294 - 0.32 11.5 5.4 0.33 11.5 0.5 2.0 2 0 0 2 2 2 0 MyTH4 domain GWT1 PF06423.12 ORF115293 - 0.17 12.0 0.4 0.19 11.9 0.4 1.1 1 0 0 1 1 1 0 GWT1 MyTH4 PF00784.17 ORF115293 - 0.32 11.5 5.4 0.33 11.5 0.5 2.0 2 0 0 2 2 2 0 MyTH4 domain FAM35_C PF15793.5 ORF115221 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF115221 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain Vps36-NZF-N PF16988.5 ORF114955 - 0.022 14.1 0.0 0.033 13.6 0.0 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain AAA_lid_5 PF17865.1 ORF114936 - 0.053 13.6 0.0 0.053 13.6 0.0 1.1 1 0 0 1 1 1 0 Midasin AAA lid domain Mab-21 PF03281.14 ORF114713 - 0.013 14.8 0.0 0.014 14.7 0.0 1.0 1 0 0 1 1 1 0 Mab-21 protein Pentapeptide_4 PF13599.6 ORF114582 - 0.04 14.1 0.1 0.05 13.8 0.1 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) IFP_35_N PF07334.13 ORF114459 - 0.2 11.7 0.0 0.24 11.5 0.0 1.1 1 0 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus MRP-L20 PF12824.7 ORF114421 - 0.065 13.4 0.2 0.073 13.2 0.2 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 Ost5 PF05251.12 ORF1138 - 3.8e-05 23.9 1.7 4.5e-05 23.6 1.7 1.1 1 0 0 1 1 1 1 Oligosaccharyltransferase subunit 5 Popeye PF04831.13 ORF1138 - 0.026 14.7 0.2 0.028 14.6 0.2 1.1 1 0 0 1 1 1 0 Popeye protein conserved region DUF825 PF05695.12 ORF113370 - 0.018 12.3 0.6 0.02 12.1 0.6 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF825) FAM35_C PF15793.5 ORF112995 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF112995 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain zf-like PF04071.12 ORF112869 - 0.032 14.2 1.7 0.038 13.9 1.7 1.2 1 0 0 1 1 1 0 Cysteine-rich small domain CxC6 PF18721.1 ORF112520 - 0.23 11.8 5.6 0.19 12.0 3.3 2.0 1 1 1 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases MipZ PF09140.11 ORF112503 - 0.13 11.6 0.7 0.12 11.6 0.7 1.1 1 0 0 1 1 1 0 ATPase MipZ DUF3402 PF11882.8 ORF111578 - 0.0078 15.4 5.2 0.0088 15.2 5.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3402) DUF2677 PF10838.8 ORF111578 - 0.085 12.8 0.3 0.091 12.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2677) Nup54_57_C PF18570.1 ORF111548 - 0.077 12.6 1.8 0.3 10.7 0.0 2.0 2 0 0 2 2 2 0 NUP57/Nup54 C-terminal domain Pico_P2B PF01552.17 ORF110957 - 0.059 13.5 0.4 0.087 13.0 0.4 1.4 1 0 0 1 1 1 0 Picornavirus 2B protein KilA-N PF04383.13 ORF110240 - 0.16 11.8 0.1 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 KilA-N domain DUF416 PF04222.12 ORF110118 - 1.8e-20 73.1 0.6 2e-20 73.0 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF416) Ribosomal_S28e PF01200.18 ORF109758 - 9.9e-29 99.1 0.5 1.1e-28 99.0 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e CpXC PF14353.6 ORF109578 - 0.03 14.4 0.3 0.034 14.2 0.3 1.1 1 0 0 1 1 1 0 CpXC protein GBP_PSP PF02425.15 ORF109203 - 0.12 12.0 0.1 0.22 11.2 0.1 1.4 1 0 0 1 1 1 0 Paralytic/GBP/PSP peptide FAM35_C PF15793.5 ORF108956 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF108956 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain Synaptobrevin PF00957.21 ORF108907 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin FAM35_C PF15793.5 ORF108750 - 0.2 11.1 3.2 0.21 11.0 3.2 1.1 1 0 0 1 1 1 0 Protein family FAM35, C-terminal C1_2 PF03107.16 ORF108750 - 9 6.7 11.5 3.6 8.0 4.3 2.1 1 1 1 2 2 2 0 C1 domain DUF5409 PF17421.2 ORF108188 - 0.015 16.0 0.5 0.018 15.7 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) PSI_integrin PF17205.3 ORF108002 - 0.36 10.6 8.1 0.061 13.1 3.5 1.9 2 0 0 2 2 2 0 Integrin plexin domain TBPIP PF07106.13 ORF10776 - 0.014 15.3 0.7 0.055 13.4 0.7 1.8 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain Sterile PF03015.19 ORF10776 - 0.03 14.6 0.1 0.036 14.3 0.1 1.2 1 0 0 1 1 1 0 Male sterility protein PduV-EutP PF10662.9 ORF10776 - 0.03 14.1 0.1 0.035 13.8 0.1 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation RPN7 PF10602.9 ORF10776 - 0.13 11.9 0.1 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 26S proteasome subunit RPN7 Synaptobrevin PF00957.21 ORF107073 - 0.75 9.6 2.3 1.1 9.1 2.3 1.2 1 0 0 1 1 1 0 Synaptobrevin Lac_bphage_repr PF06543.12 ORF107053 - 0.18 11.8 0.0 0.24 11.4 0.0 1.2 1 0 0 1 1 1 0 Lactococcus bacteriophage repressor Zea_mays_MuDR PF05928.11 ORF106895 - 0.12 12.0 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Zea mays MURB-like protein (MuDR) Peptidase_C98 PF15499.6 ORF106134 - 0.14 11.6 0.0 0.15 11.5 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase PNK3P PF08645.11 ORF105701 - 0.22 11.2 4.4 0.22 11.2 4.4 1.1 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase Prolamin_like PF05617.11 ORF105695 - 0.014 15.6 1.1 0.016 15.4 1.1 1.2 1 0 0 1 1 1 0 Prolamin-like RE_Bpu10I PF09549.10 ORF105362 - 0.023 14.3 0.4 0.024 14.2 0.4 1.0 1 0 0 1 1 1 0 Bpu10I restriction endonuclease DUF5532 PF17673.1 ORF105149 - 0.044 13.8 0.9 0.059 13.4 0.9 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5532) MscL PF01741.18 ORF104902 - 0.07 13.4 0.1 0.078 13.3 0.1 1.0 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL PsbH PF00737.20 ORF104902 - 0.15 11.8 0.3 0.22 11.3 0.3 1.3 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein PSD1 PF07587.11 ORF104188 - 0.00027 20.5 0.0 0.00029 20.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1553) DASH_Spc19 PF08287.11 ORF10416 - 0.00045 20.1 0.1 0.00054 19.9 0.1 1.1 1 0 0 1 1 1 1 Spc19 Wound_ind PF08186.11 ORF104112 - 0.016 15.6 0.1 0.016 15.6 0.1 1.6 2 0 0 2 2 2 0 Wound-inducible basic protein family DUF3736 PF12540.8 ORF104112 - 0.023 14.8 0.1 0.024 14.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3736) Fig1 PF12351.8 ORF103845 - 0.22 11.4 0.7 0.28 11.1 0.7 1.1 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 Transformer PF06495.11 ORF103845 - 0.48 10.5 15.7 0.53 10.4 15.7 1.0 1 0 0 1 1 1 0 Fruit fly transformer protein CHAT PF12770.7 ORF103833 - 0.19 11.1 0.0 0.22 10.9 0.0 1.0 1 0 0 1 1 1 0 CHAT domain PNRC PF15365.6 ORF103833 - 2.9 7.8 6.4 4.1 7.3 0.2 2.5 2 0 0 2 2 2 0 Proline-rich nuclear receptor coactivator motif DM PF00751.18 ORF10376 - 0.0087 15.9 2.1 0.0087 15.9 2.1 1.6 2 0 0 2 2 2 1 DM DNA binding domain MSP1b PF03429.13 ORF10286 - 0.032 12.3 0.1 0.032 12.3 0.1 1.0 1 0 0 1 1 1 0 Major surface protein 1B CRISPR_Cse2 PF09485.10 ORF101886 - 0.088 13.3 0.0 0.097 13.2 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein Cse2 (CRISPR_cse2) B12D PF06522.11 ORF101846 - 0.085 12.7 0.5 0.13 12.1 0.5 1.3 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit CarbpepA_inh PF02977.15 ORF101327 - 0.071 12.9 0.3 0.097 12.5 0.3 1.3 1 0 0 1 1 1 0 Carboxypeptidase A inhibitor IL1_propep PF02394.16 ORF101327 - 0.16 12.9 0.0 0.17 12.8 0.0 1.2 1 0 0 1 1 1 0 Interleukin-1 propeptide BMC PF00936.19 ORF100620 - 2.9e-10 40.0 0.0 3.3e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 BMC domain DUF4674 PF15719.5 ORF100266 - 0.015 15.3 0.3 0.017 15.2 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4674) UPF0300 PF08594.10 ORF100066 - 0.16 11.2 0.1 0.16 11.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) PORR PF11955.8 ORF100025 - 0.0037 16.3 0.9 0.0045 16.0 0.9 1.1 1 0 0 1 1 1 1 Plant organelle RNA recognition domain DUF4858 PF16150.5 ORF100025 - 0.015 15.4 2.2 0.017 15.2 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4858) DUF1072 PF06380.11 NODE_79599_length_199_cov_0.963415_g71658_i0reverse_frame_1 - 0.021 14.7 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) DUF281 PF03436.13 NODE_79596_length_199_cov_0.969512_g71655_i0reverse_frame_1 - 0.078 13.4 0.1 0.095 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF281) DUF4441 PF14536.6 NODE_79596_length_199_cov_0.969512_g71655_i0forward_frame_1 - 0.1 12.8 0.2 0.12 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) DUF5311 PF17238.2 NODE_79595_length_199_cov_0.969512_g71654_i0forward_frame_1 - 0.041 13.8 0.1 0.048 13.6 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5311) PTEN_C2 PF10409.9 NODE_79595_length_199_cov_0.969512_g71654_i0forward_frame_1 - 0.054 13.2 0.2 0.061 13.1 0.2 1.1 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein Toxin_GhoT_OrtT PF10753.9 NODE_79588_length_199_cov_0.969512_g71647_i0forward_frame_1 - 0.07 13.4 2.6 0.1 12.9 2.6 1.1 1 0 0 1 1 1 0 Toxin GhoT_OrtT Bac_export_2 PF01312.19 NODE_79584_length_199_cov_0.975610_g71643_i0forward_frame_1 - 0.055 12.7 0.2 0.059 12.6 0.2 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family Rho_Binding PF08912.11 NODE_79581_length_199_cov_0.975610_g71640_i0reverse_frame_1 - 0.033 15.0 4.1 0.041 14.7 4.1 1.0 1 0 0 1 1 1 0 Rho Binding Fer4_2 PF12797.7 NODE_79579_length_199_cov_0.975610_g71638_i0forward_frame_1 - 0.093 12.9 5.5 0.15 12.3 4.2 1.9 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_10 PF13237.6 NODE_79579_length_199_cov_0.975610_g71638_i0forward_frame_1 - 1.1 9.4 8.5 1.7 8.8 8.5 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain TAF8_C PF10406.9 NODE_79561_length_199_cov_0.975610_g71620_i0reverse_frame_1 - 0.00044 20.7 1.0 0.00082 19.9 1.0 1.5 1 0 0 1 1 1 1 Transcription factor TFIID complex subunit 8 C-term RIH_assoc PF08454.11 NODE_79556_length_199_cov_0.975610_g71615_i0reverse_frame_1 - 0.0067 16.3 0.1 0.0067 16.3 0.1 1.1 1 0 0 1 1 1 1 RyR and IP3R Homology associated CAMSAP_CH PF11971.8 NODE_79556_length_199_cov_0.975610_g71615_i0reverse_frame_1 - 0.041 13.7 0.0 0.13 12.1 0.0 1.7 2 0 0 2 2 2 0 CAMSAP CH domain Pkinase PF00069.25 NODE_79543_length_199_cov_0.975610_g71602_i0reverse_frame_1 - 3e-13 49.7 0.0 3.2e-13 49.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_79543_length_199_cov_0.975610_g71602_i0reverse_frame_1 - 7.5e-06 25.4 0.0 7.8e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase CLIP_SPH_mas PF18398.1 NODE_79542_length_199_cov_0.975610_g71601_i0reverse_frame_1 - 0.0068 16.8 0.0 0.018 15.5 0.0 1.7 2 0 0 2 2 2 1 Clip-domain serine protease homolog masquerade DHQ_synthase PF01761.20 NODE_79534_length_199_cov_0.975610_g71593_i0reverse_frame_1 - 1.6e-17 63.6 0.1 1.8e-17 63.4 0.1 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase SNF2_N PF00176.23 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.00025 19.9 0.0 0.00026 19.8 0.0 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.012 15.6 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit DUF2075 PF09848.9 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.035 13.4 0.0 0.035 13.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DEAD_2 PF06733.15 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.076 12.6 0.0 0.089 12.4 0.0 1.1 1 0 0 1 1 1 0 DEAD_2 DEAD PF00270.29 NODE_79524_length_199_cov_0.993902_g71583_i0forward_frame_1 - 0.14 11.9 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase PapG_N PF03627.13 NODE_79521_length_199_cov_1.024390_g71580_i0reverse_frame_1 - 0.18 11.5 0.0 0.2 11.3 0.0 1.1 1 0 0 1 1 1 0 PapG carbohydrate binding domain Integrase_Zn PF02022.19 NODE_79514_length_199_cov_1.054878_g71573_i0reverse_frame_1 - 0.024 14.6 1.3 0.045 13.7 1.3 1.5 1 0 0 1 1 1 0 Integrase Zinc binding domain IncE PF17627.2 NODE_79514_length_199_cov_1.054878_g71573_i0reverse_frame_1 - 0.025 14.6 0.2 0.029 14.4 0.2 1.1 1 0 0 1 1 1 0 Inclusion membrane protein E Fer4_6 PF12837.7 NODE_79509_length_199_cov_1.085366_g71568_i0reverse_frame_1 - 3.9 7.7 13.5 0.29 11.3 4.4 2.4 2 1 0 2 2 2 0 4Fe-4S binding domain TCR PF03638.15 NODE_79505_length_199_cov_1.097561_g71564_i0forward_frame_1 - 0.086 13.2 4.0 0.11 12.8 4.0 1.1 1 0 0 1 1 1 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain Helo_like_N PF17111.5 NODE_79502_length_199_cov_1.103659_g71561_i0forward_frame_1 - 0.14 11.5 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins PSGP PF07276.11 NODE_79499_length_199_cov_1.121951_g71558_i0reverse_frame_1 - 5 7.7 6.1 2.1 8.9 1.2 2.1 2 0 0 2 2 2 0 Apopolysialoglycoprotein (PSGP) DUF4381 PF14316.6 NODE_79491_length_199_cov_1.176829_g71550_i0reverse_frame_1 - 0.013 15.8 0.0 0.014 15.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Kinocilin PF15033.6 NODE_79491_length_199_cov_1.176829_g71550_i0reverse_frame_1 - 3.9 7.1 6.7 0.87 9.2 3.7 1.4 1 1 1 2 2 2 0 Kinocilin protein RPS31 PF17067.5 NODE_79489_length_199_cov_1.195122_g71548_i0reverse_frame_1 - 0.19 11.9 0.1 0.21 11.8 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e PIF6 PF05341.11 NODE_79486_length_199_cov_1.207317_g71545_i0reverse_frame_1 - 0.072 13.2 0.1 0.091 12.9 0.1 1.1 1 0 0 1 1 1 0 Per os infectivity factor 6 DUF237 PF03072.14 NODE_79485_length_199_cov_1.207317_g71544_i0reverse_frame_1 - 0.14 12.2 0.0 0.16 12.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF237) FAM221 PF14753.6 NODE_79483_length_199_cov_1.213415_g71542_i0forward_frame_1 - 0.04 13.5 0.2 0.04 13.5 0.2 1.1 1 0 0 1 1 1 0 Protein FAM221A/B SSI PF00720.17 NODE_79479_length_199_cov_1.213415_g71538_i0reverse_frame_1 - 0.82 9.7 7.8 0.89 9.6 7.8 1.0 1 0 0 1 1 1 0 Subtilisin inhibitor-like Aminotran_1_2 PF00155.21 NODE_79465_length_199_cov_1.237805_g71524_i0forward_frame_1 - 0.17 11.0 0.1 0.2 10.8 0.1 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II UPF0121 PF03661.13 NODE_79463_length_199_cov_1.243902_g71522_i0reverse_frame_1 - 0.00025 20.5 2.0 0.00028 20.4 2.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0121) COG7 PF10191.9 NODE_79463_length_199_cov_1.243902_g71522_i0forward_frame_1 - 0.036 12.3 0.0 0.042 12.1 0.0 1.0 1 0 0 1 1 1 0 Golgi complex component 7 (COG7) SUV3_C PF12513.8 NODE_79460_length_199_cov_1.274390_g71519_i0forward_frame_1 - 0.63 10.0 3.9 0.54 10.2 2.3 1.6 2 0 0 2 2 2 0 Mitochondrial degradasome RNA helicase subunit C terminal ComFB PF10719.9 NODE_79458_length_199_cov_1.298780_g71517_i0forward_frame_1 - 0.18 11.9 0.1 0.23 11.6 0.0 1.3 1 1 0 1 1 1 0 Late competence development protein ComFB Thionin PF00321.17 NODE_79456_length_199_cov_1.310976_g71515_i0reverse_frame_1 - 0.05 14.1 0.3 0.05 14.1 0.3 1.4 2 0 0 2 2 2 0 Plant thionin LtuB PF17455.2 NODE_79454_length_199_cov_1.317073_g71513_i0reverse_frame_1 - 0.027 15.1 0.0 9.9 6.9 0.1 2.0 1 1 1 2 2 2 0 Late transcription unit B TTKRSYEDQ PF10212.9 NODE_79448_length_199_cov_1.341463_g71507_i0reverse_frame_1 - 0.6 9.0 2.3 0.75 8.7 2.3 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein RICTOR_M PF14666.6 NODE_79448_length_199_cov_1.341463_g71507_i0forward_frame_1 - 0.0023 17.7 0.7 0.0028 17.4 0.7 1.2 1 0 0 1 1 1 1 Rapamycin-insensitive companion of mTOR, middle domain Vert_HS_TF PF06546.11 NODE_79448_length_199_cov_1.341463_g71507_i0forward_frame_1 - 0.024 14.3 0.3 0.024 14.3 0.3 1.0 1 0 0 1 1 1 0 Vertebrate heat shock transcription factor zf-HIT PF04438.16 NODE_79443_length_199_cov_1.347561_g71502_i0forward_frame_1 - 0.019 14.8 1.3 0.026 14.4 1.3 1.1 1 0 0 1 1 1 0 HIT zinc finger BRX PF08381.11 NODE_79438_length_199_cov_1.365854_g71497_i0forward_frame_1 - 0.1 12.0 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 DUF5359 PF17313.2 NODE_79426_length_199_cov_1.445122_g71485_i0reverse_frame_1 - 0.047 13.7 0.7 0.058 13.4 0.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5359) Ses_B PF17046.5 NODE_79425_length_199_cov_1.451220_g71484_i0forward_frame_1 - 0.039 13.9 0.1 0.058 13.4 0.1 1.1 1 0 0 1 1 1 0 SesB domain on fungal death-pathway protein CENP-B_dimeris PF09026.10 NODE_79423_length_199_cov_1.457317_g71482_i0reverse_frame_1 - 0.094 13.1 0.9 0.13 12.7 0.9 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain zf_UBZ PF18439.1 NODE_79418_length_199_cov_1.457317_g71477_i0reverse_frame_1 - 0.014 15.0 1.5 1.8 8.2 0.1 2.4 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger FYVE_2 PF02318.16 NODE_79418_length_199_cov_1.457317_g71477_i0reverse_frame_1 - 0.28 11.4 11.9 0.36 11.0 11.9 1.2 1 0 0 1 1 1 0 FYVE-type zinc finger HTH_50 PF18024.1 NODE_79416_length_199_cov_1.457317_g71475_i0reverse_frame_1 - 0.042 13.5 0.0 6.3 6.5 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain Death PF00531.22 NODE_79416_length_199_cov_1.457317_g71475_i0reverse_frame_1 - 0.079 13.1 0.0 0.17 12.0 0.0 1.6 1 1 1 2 2 2 0 Death domain Duffy_binding PF05424.11 NODE_79410_length_199_cov_1.463415_g71469_i0reverse_frame_1 - 0.013 15.5 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Duffy binding domain PPR PF01535.20 NODE_79410_length_199_cov_1.463415_g71469_i0reverse_frame_1 - 0.077 13.3 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 PPR repeat Trp_repressor PF01371.19 NODE_79410_length_199_cov_1.463415_g71469_i0reverse_frame_1 - 0.085 13.0 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Trp repressor protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks402.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks402.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks402.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks402.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Phage_Treg PF04761.12 NODE_79405_length_199_cov_1.463415_g71464_i0reverse_frame_1 - 0.061 13.4 0.0 0.082 13.0 0.0 1.3 1 0 0 1 1 1 0 Lactococcus bacteriophage putative transcription regulator Terminase_4 PF05119.12 NODE_79403_length_199_cov_1.463415_g71462_i0forward_frame_1 - 0.12 12.9 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Phage terminase, small subunit SipA PF09052.10 NODE_79403_length_199_cov_1.463415_g71462_i0forward_frame_1 - 0.12 11.9 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 SipA N-terminal domain NnrS PF05940.12 NODE_79394_length_199_cov_1.481707_g71453_i0forward_frame_1 - 0.11 11.9 0.6 0.11 11.8 0.6 1.0 1 0 0 1 1 1 0 NnrS protein DUF2911 PF11138.8 NODE_79391_length_199_cov_1.487805_g71450_i0reverse_frame_1 - 0.043 13.7 0.1 0.044 13.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2911) Chal_sti_synt_N PF00195.19 NODE_79389_length_199_cov_1.506098_g71448_i0reverse_frame_1 - 0.071 12.5 0.6 0.079 12.4 0.6 1.0 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain HlyIII PF03006.20 NODE_79386_length_199_cov_1.518293_g71445_i0forward_frame_1 - 0.055 13.2 0.1 0.059 13.1 0.1 1.0 1 0 0 1 1 1 0 Haemolysin-III related Antimicrobial18 PF08130.11 NODE_79385_length_199_cov_1.524390_g71444_i0reverse_frame_1 - 0.03 14.4 0.0 0.043 13.9 0.0 1.4 1 0 0 1 1 1 0 Type A lantibiotic family DUF5506 PF17611.2 NODE_79380_length_199_cov_1.554878_g71439_i0reverse_frame_1 - 0.02 14.8 0.0 0.02 14.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5506) AC_N PF16214.5 NODE_79379_length_199_cov_1.554878_g71438_i0forward_frame_1 - 0.21 10.7 1.1 0.22 10.6 1.1 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Plus-3 PF03126.18 NODE_79372_length_199_cov_1.615854_g71431_i0reverse_frame_1 - 0.12 12.9 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 Plus-3 domain CRIC_ras_sig PF10534.9 NODE_79361_length_199_cov_1.664634_g71420_i0forward_frame_1 - 0.095 12.9 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Connector enhancer of kinase suppressor of ras Pap_E4 PF02711.14 NODE_79360_length_199_cov_1.695122_g71419_i0reverse_frame_1 - 0.74 10.8 4.1 9.8 7.2 0.3 2.0 1 1 1 2 2 2 0 E4 protein DUF4552 PF15089.6 NODE_79356_length_199_cov_1.701220_g71415_i0reverse_frame_1 - 0.086 11.9 0.2 0.091 11.8 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) DUF3666 PF12408.8 NODE_79349_length_199_cov_1.756098_g71408_i0forward_frame_1 - 0.011 14.9 0.0 0.017 14.4 0.0 1.2 1 0 0 1 1 1 0 Ribose-5-phosphate isomerase GBP_PSP PF02425.15 NODE_79347_length_199_cov_1.768293_g71406_i0forward_frame_1 - 0.0057 16.3 1.5 0.013 15.2 1.5 1.5 1 0 0 1 1 1 1 Paralytic/GBP/PSP peptide PNKP-ligase_C PF16536.5 NODE_79341_length_199_cov_1.817073_g71400_i0reverse_frame_1 - 0.067 13.4 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 PNKP adenylyltransferase domain, C-terminal region ptaRNA1_toxin PF12703.7 NODE_79337_length_199_cov_1.823171_g71396_i0reverse_frame_1 - 0.2 11.7 0.0 0.26 11.4 0.0 1.1 1 0 0 1 1 1 0 Toxin of toxin-antitoxin type 1 system DUF4418 PF14387.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_1 - 0.01 16.0 0.1 0.011 15.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4418) Flavi_NS4A PF01350.17 NODE_79333_length_199_cov_1.865854_g71392_i0forward_frame_1 - 0.051 13.5 0.1 0.059 13.3 0.1 1.1 1 0 0 1 1 1 0 Flavivirus non-structural protein NS4A ARL6IP6 PF15062.6 NODE_79330_length_199_cov_1.878049_g71389_i0reverse_frame_1 - 0.066 13.4 0.2 0.071 13.2 0.2 1.1 1 0 0 1 1 1 0 Haemopoietic lineage transmembrane helix DUF5315 PF17242.2 NODE_79329_length_199_cov_1.890244_g71388_i0forward_frame_1 - 0.17 11.7 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Disordered region of unknown function (DUF5315) MRP-S28 PF10213.9 NODE_79326_length_199_cov_1.896341_g71385_i0forward_frame_1 - 0.042 14.3 0.0 0.049 14.1 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit protein ABC2_membrane PF01061.24 NODE_79305_length_199_cov_2.042683_g71364_i0reverse_frame_1 - 0.014 14.8 0.4 0.014 14.8 0.4 1.1 1 0 0 1 1 1 0 ABC-2 type transporter BclA_C PF18573.1 NODE_79298_length_199_cov_2.146341_g71357_i0forward_frame_1 - 0.046 13.6 0.0 0.046 13.6 0.0 1.1 1 0 0 1 1 1 0 BclA C-terminal domain Dmd PF17587.2 NODE_79290_length_199_cov_2.225610_g71349_i0reverse_frame_1 - 0.049 14.0 1.1 0.066 13.6 1.1 1.3 1 0 0 1 1 1 0 Discriminator of mRNA degradation AIM3 PF17096.5 NODE_79284_length_199_cov_2.262195_g71343_i0forward_frame_1 - 0.015 16.2 2.1 0.018 16.0 2.1 1.1 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 Peptidase_G2 PF11962.8 NODE_79284_length_199_cov_2.262195_g71343_i0forward_frame_1 - 0.07 12.5 1.0 0.076 12.4 1.0 1.1 1 0 0 1 1 1 0 Peptidase_G2, IMC autoproteolytic cleavage domain Rhabdo_M2 PF04785.12 NODE_79284_length_199_cov_2.262195_g71343_i0forward_frame_1 - 0.11 11.8 0.2 0.11 11.7 0.2 1.2 1 0 0 1 1 1 0 Rhabdovirus matrix protein M2 Ribosomal_L34 PF00468.17 NODE_79270_length_199_cov_2.518293_g71329_i0forward_frame_1 - 0.082 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L34 CGI-121 PF08617.10 NODE_79265_length_199_cov_2.682927_g71324_i0reverse_frame_1 - 0.029 14.5 0.2 0.03 14.5 0.2 1.1 1 0 0 1 1 1 0 Kinase binding protein CGI-121 DUF4006 PF13179.6 NODE_79265_length_199_cov_2.682927_g71324_i0reverse_frame_1 - 0.22 11.5 1.8 0.22 11.4 0.3 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF4006) DGF-1_4 PF11024.8 NODE_79264_length_199_cov_2.682927_g71323_i0forward_frame_1 - 0.024 15.4 0.0 0.026 15.3 0.0 1.1 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 4 Toxin_29 PF08116.11 NODE_79262_length_199_cov_2.707317_g71321_i0forward_frame_1 - 0.35 10.9 7.8 0.13 12.3 2.9 2.3 2 0 0 2 2 2 0 PhTx neurotoxin family WAP PF00095.21 NODE_79262_length_199_cov_2.707317_g71321_i0forward_frame_1 - 1.1 9.7 20.0 2.4 8.6 3.4 2.4 1 1 1 2 2 2 0 WAP-type (Whey Acidic Protein) 'four-disulfide core' XPG_I PF00867.18 NODE_79261_length_199_cov_2.768293_g71320_i0reverse_frame_1 - 2.5e-17 63.0 0.0 2.8e-17 62.8 0.0 1.1 1 0 0 1 1 1 1 XPG I-region XPG_I_2 PF12813.7 NODE_79261_length_199_cov_2.768293_g71320_i0reverse_frame_1 - 7.1e-06 25.7 0.0 7.6e-06 25.6 0.0 1.0 1 0 0 1 1 1 1 XPG domain containing FWWh PF14922.6 NODE_79255_length_199_cov_2.835366_g71314_i0forward_frame_1 - 0.0033 17.4 0.1 0.0033 17.4 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF4251 PF14059.6 NODE_79253_length_199_cov_2.987805_g71312_i0reverse_frame_1 - 0.052 13.5 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4251) DUF1600 PF07667.11 NODE_79245_length_199_cov_3.256098_g71304_i0reverse_frame_1 - 0.053 13.7 6.3 0.059 13.6 6.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) DUF3599 PF12206.8 NODE_79245_length_199_cov_3.256098_g71304_i0forward_frame_1 - 0.019 15.3 0.0 0.022 15.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3599) DUF1471 PF07338.13 NODE_79241_length_199_cov_3.310976_g71300_i0reverse_frame_1 - 5.6e-17 61.5 1.7 6.5e-17 61.3 1.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1471) DUF2675 PF11247.8 NODE_79234_length_199_cov_3.646341_g71293_i0reverse_frame_1 - 0.045 13.9 0.2 0.054 13.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2675) SHIPPO-rpt PF07004.12 NODE_79232_length_199_cov_5.103659_g71291_i0reverse_frame_1 - 0.075 14.0 9.9 0.36 11.8 0.7 3.1 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat DCA16 PF15349.6 NODE_79227_length_199_cov_8.493902_g71286_i0forward_frame_1 - 0.068 12.7 0.3 0.065 12.8 0.3 1.1 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 Myc_target_1 PF15179.6 NODE_79215_length_199_cov_27.487805_g71274_i0reverse_frame_1 - 0.074 12.9 0.3 0.081 12.8 0.3 1.0 1 0 0 1 1 1 0 Myc target protein 1 SEF14_adhesin PF06443.11 NODE_79211_length_199_cov_29.140244_g71270_i0reverse_frame_1 - 0.08 12.8 0.0 0.089 12.7 0.0 1.0 1 0 0 1 1 1 0 SEF14-like adhesin ORC6 PF05460.13 NODE_79207_length_199_cov_32.597561_g71266_i0reverse_frame_1 - 0.15 11.3 0.3 0.17 11.1 0.3 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Gp49 PF05973.14 NODE_79198_length_199_cov_36.036585_g71257_i0reverse_frame_1 - 0.11 12.7 0.3 0.33 11.1 0.1 1.7 1 1 1 2 2 2 0 Phage derived protein Gp49-like (DUF891) Phage_min_tail PF05939.13 NODE_79192_length_199_cov_40.823171_g71251_i0forward_frame_1 - 0.025 15.0 0.0 0.029 14.8 0.0 1.1 1 0 0 1 1 1 0 Phage minor tail protein Histone_H2A_C PF16211.5 NODE_79192_length_199_cov_40.823171_g71251_i0forward_frame_1 - 1.6 8.5 5.4 2.5 7.9 5.4 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Integrin_alpha PF00357.20 NODE_79189_length_199_cov_42.896341_g71248_i0reverse_frame_1 - 0.09 12.8 1.4 0.2 11.7 1.4 1.6 1 0 0 1 1 1 0 Integrin alpha cytoplasmic region Pkinase PF00069.25 NODE_79187_length_199_cov_43.219512_g71246_i0forward_frame_1 - 0.016 14.6 0.1 0.016 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein kinase domain GRAS PF03514.14 NODE_79173_length_199_cov_57.902439_g71232_i0forward_frame_1 - 0.085 11.8 0.0 0.095 11.6 0.0 1.0 1 0 0 1 1 1 0 GRAS domain family DUF2178 PF09946.9 NODE_79170_length_199_cov_69.689024_g71229_i0reverse_frame_1 - 0.063 13.5 0.6 0.083 13.1 0.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2178) SR-25 PF10500.9 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_1 - 0.13 11.8 7.1 0.14 11.7 7.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Tube PF17212.3 NODE_79159_length_199_cov_113.621951_g71218_i0forward_frame_1 - 0.17 11.9 0.0 0.17 11.9 0.0 1.0 1 0 0 1 1 1 0 Tail tubular protein DUF3169 PF11368.8 NODE_79150_length_199_cov_1541.615854_g71209_i0reverse_frame_1 - 0.13 11.7 0.0 0.2 11.1 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3169) RPA_interact_N PF14766.6 NODE_79148_length_199_cov_4475.951220_g71207_i0forward_frame_1 - 0.068 12.8 8.9 0.27 10.9 1.1 2.2 2 0 0 2 2 2 0 Replication protein A interacting N-terminal MetOD1 PF18546.1 NODE_79147_length_199_cov_4490.750000_g71206_i0forward_frame_1 - 0.16 12.0 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Metanogen output domain 1 Dynactin_p62 PF05502.13 NODE_79146_length_199_cov_8057.378049_g71205_i0reverse_frame_1 - 0.064 12.0 0.5 0.067 12.0 0.5 1.0 1 0 0 1 1 1 0 Dynactin p62 family IF3_C PF00707.22 NODE_79137_length_200_cov_0.896970_g71196_i0forward_frame_1 - 0.1 12.5 0.3 0.13 12.2 0.3 1.2 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain Inhibitor_I53 PF11714.8 NODE_79135_length_200_cov_0.951515_g71194_i0reverse_frame_1 - 0.055 13.7 0.1 0.062 13.5 0.1 1.1 1 0 0 1 1 1 0 Thrombin inhibitor Madanin Conotoxin PF02950.17 NODE_79125_length_200_cov_0.963636_g71184_i0reverse_frame_1 - 0.017 16.2 0.4 0.021 15.8 0.0 1.4 2 0 0 2 2 2 0 Conotoxin DUF5383 PF17355.2 NODE_79125_length_200_cov_0.963636_g71184_i0forward_frame_1 - 0.03 14.7 2.5 0.05 14.0 2.5 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5383) DUF4441 PF14536.6 NODE_79120_length_200_cov_0.963636_g71179_i0forward_frame_1 - 0.027 14.6 1.0 0.037 14.2 1.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) ABC_trans_CmpB PF06541.11 NODE_79120_length_200_cov_0.963636_g71179_i0forward_frame_1 - 0.12 12.6 0.2 0.12 12.6 0.2 1.1 1 0 0 1 1 1 0 Putative ABC-transporter type IV SR-25 PF10500.9 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.00035 20.2 6.4 0.00042 20.0 6.4 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein RAB3GAP2_N PF14655.6 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.073 12.3 6.2 0.077 12.2 6.2 1.0 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit N-terminus RPA43_OB PF17875.1 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.078 13.6 4.2 0.082 13.5 4.2 1.1 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I IMUP PF15761.5 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.079 13.7 3.4 0.1 13.3 3.4 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein Dynamin_N PF00350.23 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.19 11.8 2.1 0.2 11.7 2.1 1.0 1 0 0 1 1 1 0 Dynamin family DUF4834 PF16118.5 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.2 12.6 3.5 0.22 12.5 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Serinc PF03348.15 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.26 10.2 1.8 0.27 10.1 1.8 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) Connexin PF00029.19 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 0.33 10.7 2.5 0.35 10.6 2.5 1.0 1 0 0 1 1 1 0 Connexin Presenilin PF01080.17 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_1 - 3.1 6.5 6.0 3.5 6.3 6.0 1.1 1 0 0 1 1 1 0 Presenilin L_lactis_RepB_C PF06430.12 NODE_79115_length_200_cov_0.963636_g71174_i0forward_frame_1 - 0.049 13.6 0.2 0.053 13.5 0.2 1.1 1 0 0 1 1 1 0 Lactococcus lactis RepB C-terminus DUF4291 PF14124.6 NODE_79114_length_200_cov_0.969697_g71173_i0forward_frame_1 - 0.086 12.7 0.1 0.096 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4291) RGS12_usC PF16612.5 NODE_79109_length_200_cov_0.969697_g71168_i0reverse_frame_1 - 0.01 16.3 0.0 0.011 16.2 0.0 1.1 1 0 0 1 1 1 0 C-terminal unstructured region of RGS12 STAT_alpha PF01017.20 NODE_79109_length_200_cov_0.969697_g71168_i0reverse_frame_1 - 0.041 13.8 0.1 0.051 13.5 0.1 1.1 1 0 0 1 1 1 0 STAT protein, all-alpha domain MANEC PF07502.14 NODE_79095_length_200_cov_0.969697_g71154_i0forward_frame_1 - 0.029 14.7 0.0 0.038 14.3 0.0 1.2 1 0 0 1 1 1 0 MANEC domain HNH_3 PF13392.6 NODE_79092_length_200_cov_0.969697_g71151_i0forward_frame_1 - 4e-06 26.5 0.1 5.9e-06 25.9 0.1 1.2 1 0 0 1 1 1 1 HNH endonuclease Fer2_3 PF13085.6 NODE_79090_length_200_cov_0.969697_g71149_i0forward_frame_1 - 0.74 9.9 2.5 0.96 9.5 2.5 1.1 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain TetR_C_14 PF17754.1 NODE_79063_length_200_cov_1.127273_g71122_i0forward_frame_1 - 0.0095 15.9 0.0 0.01 15.7 0.0 1.1 1 0 0 1 1 1 1 MftR C-terminal domain RMMBL PF07521.12 NODE_79054_length_200_cov_1.187879_g71113_i0reverse_frame_1 - 0.094 12.7 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain tRNA_synt_2f PF02092.17 NODE_79050_length_200_cov_1.200000_g71109_i0reverse_frame_1 - 0.063 12.2 0.0 0.072 12.0 0.0 1.0 1 0 0 1 1 1 0 Glycyl-tRNA synthetase beta subunit ACT_7 PF13840.6 NODE_79049_length_200_cov_1.206061_g71108_i0forward_frame_1 - 0.12 12.2 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 ACT domain Neurensin PF14927.6 NODE_79029_length_200_cov_1.272727_g71088_i0forward_frame_1 - 0.12 12.1 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Neurensin DIM1 PF02966.16 NODE_79027_length_200_cov_1.272727_g71086_i0reverse_frame_1 - 0.087 12.6 0.4 0.092 12.5 0.4 1.1 1 0 0 1 1 1 0 Mitosis protein DIM1 AMP-binding PF00501.28 NODE_79023_length_200_cov_1.290909_g71082_i0forward_frame_1 - 0.00011 21.0 0.0 0.00011 21.0 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme Ivy PF08816.11 NODE_79017_length_200_cov_1.315152_g71076_i0forward_frame_1 - 0.083 13.1 0.1 0.093 12.9 0.1 1.1 1 0 0 1 1 1 0 Inhibitor of vertebrate lysozyme (Ivy) Swi3 PF07962.12 NODE_79014_length_200_cov_1.339394_g71073_i0reverse_frame_1 - 0.053 13.5 0.2 0.063 13.3 0.2 1.2 1 0 0 1 1 1 0 Replication Fork Protection Component Swi3 Fels1 PF05666.11 NODE_79008_length_200_cov_1.375758_g71067_i0reverse_frame_1 - 0.04 13.6 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 Fels-1 Prophage Protein-like ATP-synt_8 PF00895.20 NODE_79002_length_200_cov_1.393939_g71061_i0reverse_frame_1 - 2 8.9 6.2 1.1 9.8 4.1 1.7 1 1 1 2 2 2 0 ATP synthase protein 8 Phage_holin_2_3 PF16080.5 NODE_78991_length_200_cov_1.442424_g71050_i0reverse_frame_1 - 0.31 10.8 2.2 0.86 9.4 2.2 1.7 1 1 0 1 1 1 0 Bacteriophage holin family HP1 Fer4_23 PF18009.1 NODE_78990_length_200_cov_1.442424_g71049_i0reverse_frame_1 - 0.0042 17.5 1.3 0.0047 17.3 1.3 1.3 1 0 0 1 1 1 1 4Fe-4S iron-sulfur cluster binding domain Orexin PF02072.15 NODE_78990_length_200_cov_1.442424_g71049_i0reverse_frame_1 - 0.15 12.0 3.7 0.16 11.9 1.4 1.8 1 1 1 2 2 2 0 Prepro-orexin MANEC PF07502.14 NODE_78990_length_200_cov_1.442424_g71049_i0reverse_frame_1 - 0.2 12.0 6.5 0.26 11.6 6.5 1.1 1 0 0 1 1 1 0 MANEC domain TPR_2 PF07719.17 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 4.3e-05 23.3 0.2 0.00014 21.7 0.2 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.00021 21.2 0.4 0.00049 20.1 0.1 1.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.00099 19.3 0.1 0.0013 19.0 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.0015 18.3 0.3 0.0079 16.0 0.2 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.0094 15.9 0.3 0.022 14.7 0.2 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.012 15.2 2.6 0.028 14.1 2.8 1.6 1 1 0 1 1 1 0 TPR repeat TPR_MalT PF17874.1 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.029 13.7 0.0 0.029 13.7 0.0 1.0 1 0 0 1 1 1 0 MalT-like TPR region RHD_DNA_bind PF00554.22 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.057 13.4 0.0 0.063 13.2 0.0 1.0 1 0 0 1 1 1 0 Rel homology DNA-binding domain TPR_10 PF13374.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.083 12.8 0.6 0.18 11.8 0.6 1.6 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_78987_length_200_cov_1.448485_g71046_i0forward_frame_1 - 0.099 13.5 0.0 0.12 13.2 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF3629 PF12302.8 NODE_78978_length_200_cov_1.454545_g71037_i0reverse_frame_1 - 0.0097 15.4 0.1 0.0097 15.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3629) DUF5554 PF17709.1 NODE_78975_length_200_cov_1.454545_g71034_i0reverse_frame_1 - 0.00045 20.3 0.0 0.0027 17.8 0.0 1.9 1 1 1 2 2 2 1 Family of unknown function (DUF5554) YqgC PF17430.2 NODE_78969_length_200_cov_1.454545_g71028_i0reverse_frame_1 - 0.1 12.7 0.9 0.17 12.0 0.1 1.8 1 1 1 2 2 2 0 Uncharacterized YqgC-like DUF4867 PF16161.5 NODE_78961_length_200_cov_1.515152_g71020_i0reverse_frame_1 - 0.087 12.3 0.1 0.092 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4867) DUF3792 PF12670.7 NODE_78948_length_200_cov_1.587879_g71007_i0forward_frame_1 - 0.13 12.5 0.2 0.13 12.5 0.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3792) DUF5065 PF16723.5 NODE_78944_length_200_cov_1.606061_g71003_i0forward_frame_1 - 0.064 13.3 0.1 0.071 13.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5065) zf-CCHC PF00098.23 NODE_78943_length_200_cov_1.612121_g71002_i0forward_frame_1 - 0.00012 22.0 0.7 0.00019 21.4 0.7 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_3 PF13917.6 NODE_78943_length_200_cov_1.612121_g71002_i0forward_frame_1 - 0.00033 20.5 0.1 0.00045 20.1 0.1 1.2 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_4 PF14392.6 NODE_78943_length_200_cov_1.612121_g71002_i0forward_frame_1 - 0.087 12.6 0.8 0.12 12.1 0.8 1.2 1 0 0 1 1 1 0 Zinc knuckle TraQ PF09679.10 NODE_78939_length_200_cov_1.630303_g70998_i0reverse_frame_1 - 0.043 13.7 0.4 0.054 13.4 0.4 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin chaperone (TraQ) CCER1 PF15482.6 NODE_78935_length_200_cov_1.648485_g70994_i0reverse_frame_1 - 0.038 13.9 1.3 0.042 13.7 1.3 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 CIAPIN1 PF05093.13 NODE_78932_length_200_cov_1.660606_g70991_i0reverse_frame_1 - 0.058 13.9 0.0 0.058 13.9 0.0 1.1 1 0 0 1 1 1 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis Thioredoxin PF00085.20 NODE_78911_length_200_cov_1.763636_g70970_i0forward_frame_1 - 0.086 12.8 0.0 0.088 12.8 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin CpeT PF06206.11 NODE_78909_length_200_cov_1.787879_g70968_i0forward_frame_1 - 0.024 14.6 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 CpeT/CpcT family (DUF1001) CNOT11 PF10155.9 NODE_78907_length_200_cov_1.806061_g70966_i0reverse_frame_1 - 0.099 12.8 1.4 0.14 12.3 1.4 1.5 1 1 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 TAT_signal PF10518.9 NODE_78903_length_200_cov_1.848485_g70962_i0reverse_frame_1 - 0.0016 18.2 0.3 0.0022 17.7 0.3 1.2 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence TRP PF06011.12 NODE_78902_length_200_cov_1.872727_g70961_i0reverse_frame_1 - 0.0033 16.2 2.0 0.0033 16.2 2.0 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel GIT1_C PF12205.8 NODE_78896_length_200_cov_1.909091_g70955_i0forward_frame_1 - 0.062 13.4 0.1 0.073 13.2 0.1 1.0 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term PRIMA1 PF16101.5 NODE_78893_length_200_cov_1.915152_g70952_i0forward_frame_1 - 0.043 13.8 4.2 0.047 13.7 4.2 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 TMIE PF16038.5 NODE_78887_length_200_cov_1.933333_g70946_i0forward_frame_1 - 0.023 14.5 2.5 0.033 14.0 2.5 1.2 1 0 0 1 1 1 0 TMIE protein ubiquitin PF00240.23 NODE_78884_length_200_cov_1.933333_g70943_i0reverse_frame_1 - 0.09 12.5 0.0 0.097 12.4 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin family Tet_JBP PF12851.7 NODE_78877_length_200_cov_1.957576_g70936_i0forward_frame_1 - 0.13 11.6 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Oxygenase domain of the 2OGFeDO superfamily TcdB_toxin_midC PF12255.8 NODE_78870_length_200_cov_2.006061_g70929_i0reverse_frame_1 - 0.057 13.5 0.3 0.066 13.3 0.3 1.0 1 0 0 1 1 1 0 Insecticide toxin TcdB middle/C-terminal region YvfG PF09628.10 NODE_78867_length_200_cov_2.060606_g70926_i0reverse_frame_1 - 0.058 13.7 0.8 0.12 12.7 0.2 1.7 2 0 0 2 2 2 0 YvfG protein Pro_sub2 PF18513.1 NODE_78855_length_200_cov_2.175758_g70914_i0forward_frame_1 - 0.02 15.1 4.6 0.023 14.9 4.6 1.1 1 0 0 1 1 1 0 Prodomain subtilisin 2 DUF2682 PF10909.8 NODE_78854_length_200_cov_2.181818_g70913_i0reverse_frame_1 - 0.027 14.9 0.1 0.034 14.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2682) rve PF00665.26 NODE_78846_length_200_cov_2.351515_g70905_i0forward_frame_1 - 1.9e-08 34.5 0.0 2e-08 34.4 0.0 1.0 1 0 0 1 1 1 1 Integrase core domain DUF4224 PF13986.6 NODE_78846_length_200_cov_2.351515_g70905_i0forward_frame_1 - 0.13 12.2 0.0 0.72 9.8 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) EamA PF00892.20 NODE_78845_length_200_cov_2.363636_g70904_i0reverse_frame_1 - 0.0014 18.8 1.3 0.0016 18.6 1.3 1.0 1 0 0 1 1 1 1 EamA-like transporter family BT1 PF03092.16 NODE_78845_length_200_cov_2.363636_g70904_i0reverse_frame_1 - 0.0028 16.0 0.9 0.003 15.9 0.9 1.0 1 0 0 1 1 1 1 BT1 family DUF1402 PF07182.11 NODE_78844_length_200_cov_2.369697_g70903_i0reverse_frame_1 - 0.02 14.0 0.0 0.023 13.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1402) PilI PF10623.9 NODE_78838_length_200_cov_2.436364_g70897_i0reverse_frame_1 - 0.01 16.0 0.6 0.011 15.9 0.3 1.3 1 1 0 1 1 1 0 Plasmid conjugative transfer protein PilI AIM5 PF17050.5 NODE_78836_length_200_cov_2.515152_g70895_i0reverse_frame_1 - 0.047 14.5 0.5 0.053 14.3 0.5 1.4 1 1 0 1 1 1 0 Altered inheritance of mitochondria 5 SH3_11 PF18103.1 NODE_78836_length_200_cov_2.515152_g70895_i0reverse_frame_1 - 0.05 13.8 0.0 0.069 13.3 0.0 1.2 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain DUF959 PF06121.14 NODE_78831_length_200_cov_2.672727_g70890_i0forward_frame_1 - 0.25 11.6 0.0 0.25 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF959) Chordopox_G3 PF06129.12 NODE_78828_length_200_cov_2.993939_g70887_i0forward_frame_1 - 0.14 12.9 1.4 0.25 12.0 1.4 1.4 1 1 1 2 2 2 0 Chordopoxvirus G3 protein Cytomega_UL84 PF06284.11 NODE_78828_length_200_cov_2.993939_g70887_i0forward_frame_1 - 0.17 10.3 0.1 0.19 10.2 0.1 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein PNP_phzG_C PF10590.9 NODE_78825_length_200_cov_3.181818_g70884_i0reverse_frame_1 - 0.027 14.6 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IF3_C PF00707.22 NODE_78821_length_200_cov_3.375758_g70880_i0reverse_frame_1 - 0.039 13.9 0.1 0.046 13.7 0.1 1.1 1 0 0 1 1 1 0 Translation initiation factor IF-3, C-terminal domain MASE4 PF17158.4 NODE_78819_length_200_cov_3.727273_g70878_i0reverse_frame_1 - 1.1e-14 54.4 3.9 1.1e-14 54.3 3.9 1.0 1 0 0 1 1 1 1 Membrane-associated sensor, integral membrane domain RHS PF03527.14 NODE_78819_length_200_cov_3.727273_g70878_i0reverse_frame_1 - 0.00026 20.7 0.1 0.00047 19.8 0.1 1.4 1 0 0 1 1 1 1 RHS protein zf-NF-X1 PF01422.17 NODE_78815_length_200_cov_17.624242_g70874_i0reverse_frame_1 - 0.11 12.6 0.2 0.11 12.6 0.2 1.6 2 0 0 2 2 2 0 NF-X1 type zinc finger Sirohm_synth_M PF14824.6 NODE_78813_length_200_cov_21.151515_g70872_i0reverse_frame_1 - 0.12 11.8 0.3 0.37 10.3 0.3 1.9 1 0 0 1 1 1 0 Sirohaem biosynthesis protein central DUF2947 PF11163.8 NODE_78802_length_200_cov_32.903030_g70861_i0forward_frame_1 - 0.04 13.8 0.2 0.046 13.6 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2947) FemAB PF02388.16 NODE_78801_length_200_cov_32.993939_g70860_i0forward_frame_1 - 0.033 13.1 0.7 0.034 13.0 0.7 1.0 1 0 0 1 1 1 0 FemAB family Babuvirus_MP PF07234.11 NODE_78785_length_200_cov_51.557576_g70844_i0forward_frame_1 - 1.5 9.1 3.9 1.7 8.8 3.9 1.2 1 0 0 1 1 1 0 Movement and RNA silencing protein Tmemb_161AB PF10268.9 NODE_78783_length_200_cov_52.036364_g70842_i0forward_frame_1 - 0.062 11.9 0.1 0.064 11.9 0.1 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB TMEM108 PF15759.5 NODE_78781_length_200_cov_55.739394_g70840_i0forward_frame_1 - 0.76 8.7 7.2 0.86 8.5 7.2 1.0 1 0 0 1 1 1 0 TMEM108 family BRE1 PF08647.11 NODE_78778_length_200_cov_61.200000_g70837_i0reverse_frame_1 - 0.0075 16.3 0.1 0.0095 16.0 0.1 1.1 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase LapA_dom PF06305.11 NODE_78776_length_200_cov_62.666667_g70835_i0forward_frame_1 - 0.041 13.7 2.1 0.063 13.1 2.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF2778 PF10908.8 NODE_78763_length_200_cov_85.139394_g70822_i0forward_frame_1 - 0.07 13.4 1.3 0.076 13.3 1.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2778) BssB_TutG PF18512.1 NODE_78756_length_200_cov_110.309091_g70815_i0reverse_frame_1 - 0.039 13.8 3.3 0.048 13.5 3.3 1.2 1 0 0 1 1 1 0 Benzylsuccinate synthase beta subunit Sex_peptide PF08138.11 NODE_78747_length_200_cov_147.296970_g70806_i0forward_frame_1 - 0.0051 16.9 0.1 0.0085 16.2 0.1 1.4 1 0 0 1 1 1 1 Sex peptide (SP) family MAGUK_N_PEST PF10608.9 NODE_78744_length_200_cov_218.127273_g70803_i0forward_frame_1 - 0.11 12.9 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Polyubiquitination (PEST) N-terminal domain of MAGUK T3SS_needle_reg PF09025.10 NODE_78741_length_200_cov_269.539394_g70800_i0forward_frame_1 - 0.056 13.4 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 YopR, type III needle-polymerisation regulator DUF505 PF04458.12 NODE_78741_length_200_cov_269.539394_g70800_i0forward_frame_1 - 0.082 11.3 0.0 0.09 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Destabilase PF05497.12 NODE_78736_length_201_cov_0.849398_g70795_i0forward_frame_1 - 0.054 13.8 1.5 0.055 13.8 1.3 1.2 1 1 0 1 1 1 0 Destabilase DUF3043 PF11241.8 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_1 - 0.4 10.7 4.4 0.46 10.5 4.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Atrophin-1 PF03154.15 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_1 - 0.81 7.9 17.2 0.79 7.9 17.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family Cytomega_UL84 PF06284.11 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_1 - 1 7.7 3.8 1 7.8 3.8 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Apis_Csd PF11671.8 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_1 - 3.3 7.7 8.2 3.5 7.6 8.2 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein PAX PF00292.18 NODE_78731_length_201_cov_0.903614_g70790_i0reverse_frame_1 - 0.11 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 'Paired box' domain ADAM17_MPD PF16698.5 NODE_78730_length_201_cov_0.921687_g70789_i0reverse_frame_1 - 0.016 15.6 0.5 0.018 15.4 0.5 1.2 1 0 0 1 1 1 0 Membrane-proximal domain, switch, for ADAM17 Cortexin PF11057.8 NODE_78729_length_201_cov_0.933735_g70788_i0reverse_frame_1 - 0.86 9.5 6.3 1.2 9.0 6.3 1.2 1 0 0 1 1 1 0 Cortexin of kidney Prolactin_RP PF15172.6 NODE_78715_length_201_cov_0.963855_g70774_i0reverse_frame_1 - 0.0027 17.3 0.5 0.0038 16.8 0.5 1.3 1 0 0 1 1 1 1 Prolactin-releasing peptide Fer4_3 PF12798.7 NODE_78713_length_201_cov_0.963855_g70772_i0reverse_frame_1 - 1.5 9.9 6.5 8.5 7.6 1.5 2.5 2 1 0 2 2 2 0 4Fe-4S binding domain NUC202 PF08166.12 NODE_78711_length_201_cov_0.963855_g70770_i0reverse_frame_1 - 0.1 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 NUC202 domain DUF3425 PF11905.8 NODE_78710_length_201_cov_0.963855_g70769_i0forward_frame_1 - 0.03 14.3 0.0 0.035 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3425) SfLAP PF11139.8 NODE_78706_length_201_cov_0.963855_g70765_i0reverse_frame_1 - 0.07 12.6 0.5 0.086 12.3 0.5 1.0 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein zf-LITAF-like PF10601.9 NODE_78706_length_201_cov_0.963855_g70765_i0reverse_frame_1 - 0.1 12.9 0.4 0.12 12.6 0.4 1.1 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain DUF3043 PF11241.8 NODE_78704_length_201_cov_0.963855_g70763_i0forward_frame_1 - 2.1 8.3 4.1 2.3 8.2 4.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Endothelin PF00322.17 NODE_78697_length_201_cov_0.963855_g70756_i0forward_frame_1 - 0.32 10.6 5.2 0.56 9.9 5.2 1.5 1 0 0 1 1 1 0 Endothelin family RPA_interact_N PF14766.6 NODE_78696_length_201_cov_0.963855_g70755_i0reverse_frame_1 - 0.0056 16.3 0.1 0.011 15.3 0.1 1.5 1 0 0 1 1 1 1 Replication protein A interacting N-terminal DUF4611 PF15387.6 NODE_78690_length_201_cov_0.963855_g70749_i0reverse_frame_1 - 0.12 12.6 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) Pox_RNA_Pol_22 PF05273.13 NODE_78690_length_201_cov_0.963855_g70749_i0forward_frame_1 - 0.16 11.7 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Poxvirus RNA polymerase 22 kDa subunit MVL PF12151.8 NODE_78687_length_201_cov_0.963855_g70746_i0reverse_frame_1 - 0.047 13.5 0.1 6.9 6.6 0.0 2.2 2 0 0 2 2 2 0 Mannan-binding protein TRI5 PF06330.11 NODE_78687_length_201_cov_0.963855_g70746_i0reverse_frame_1 - 0.28 10.0 0.6 0.3 9.9 0.6 1.0 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) DUF4215 PF13948.6 NODE_78684_length_201_cov_0.963855_g70743_i0forward_frame_1 - 4.3e-10 39.9 30.2 7e-07 29.6 14.7 3.0 1 1 2 3 3 3 3 Domain of unknown function (DUF4215) VP7 PF00434.18 NODE_78673_length_201_cov_1.006024_g70732_i0forward_frame_1 - 0.051 12.7 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 Glycoprotein VP7 Col_cuticle_N PF01484.17 NODE_78668_length_201_cov_1.036145_g70727_i0reverse_frame_1 - 0.042 13.9 3.8 0.094 12.8 3.8 1.6 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks403.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks403.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks403.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks403.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:42:49 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1509 PF07420.11 NODE_78666_length_201_cov_1.060241_g70725_i0forward_frame_1 - 0.018 14.1 1.8 0.019 13.9 1.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) DUF5480 PF17576.2 NODE_78664_length_201_cov_1.072289_g70723_i0forward_frame_1 - 0.027 14.4 0.0 0.032 14.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5480) PGM_PMM_II PF02879.16 NODE_78659_length_201_cov_1.126506_g70718_i0reverse_frame_1 - 4e-08 33.8 0.0 4.3e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Usg PF06233.12 NODE_78655_length_201_cov_1.144578_g70714_i0forward_frame_1 - 0.072 13.2 0.0 0.34 11.1 0.0 1.8 1 1 1 2 2 2 0 Usg-like family DUF997 PF06196.12 NODE_78651_length_201_cov_1.150602_g70710_i0forward_frame_1 - 0.076 13.0 3.1 0.091 12.8 3.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF997) DUF2249 PF10006.9 NODE_78645_length_201_cov_1.186747_g70704_i0reverse_frame_1 - 0.021 14.7 0.0 0.49 10.3 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) DUF3038 PF11237.8 NODE_78640_length_201_cov_1.204819_g70699_i0forward_frame_1 - 0.016 15.3 0.2 0.017 15.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) ACTL7A_N PF16840.5 NODE_78639_length_201_cov_1.204819_g70698_i0reverse_frame_1 - 0.056 13.5 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 Actin-like protein 7A N-terminus Vps51 PF08700.11 NODE_78638_length_201_cov_1.204819_g70697_i0forward_frame_1 - 0.035 14.2 0.2 0.046 13.8 0.2 1.3 1 1 0 1 1 1 0 Vps51/Vps67 BLOC1_2 PF10046.9 NODE_78638_length_201_cov_1.204819_g70697_i0forward_frame_1 - 0.037 14.3 1.9 0.058 13.7 1.9 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF5638 PF18688.1 NODE_78638_length_201_cov_1.204819_g70697_i0forward_frame_1 - 0.042 14.2 0.0 0.051 13.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5638) ApoC-I PF04691.12 NODE_78638_length_201_cov_1.204819_g70697_i0forward_frame_1 - 0.067 13.1 0.2 0.095 12.6 0.2 1.2 1 0 0 1 1 1 0 Apolipoprotein C-I (ApoC-1) DUF2284 PF10050.9 NODE_78633_length_201_cov_1.234940_g70692_i0forward_frame_1 - 0.063 13.0 2.4 0.066 13.0 2.4 1.1 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Pkinase PF00069.25 NODE_78630_length_201_cov_1.271084_g70689_i0forward_frame_1 - 4e-06 26.4 0.0 4e-06 26.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain YfzA PF14118.6 NODE_78619_length_201_cov_1.313253_g70678_i0forward_frame_1 - 0.0078 16.6 0.0 0.0091 16.4 0.0 1.1 1 0 0 1 1 1 1 YfzA-like protein DUF5409 PF17421.2 NODE_78612_length_201_cov_1.391566_g70671_i0reverse_frame_1 - 0.35 11.6 5.8 0.42 11.4 5.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) DUF3850 PF12961.7 NODE_78612_length_201_cov_1.391566_g70671_i0forward_frame_1 - 0.093 12.8 1.3 2.5 8.2 1.3 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF3850) Peptidase_C25 PF01364.18 NODE_78605_length_201_cov_1.415663_g70664_i0forward_frame_1 - 0.0055 16.0 0.0 0.0055 16.0 0.0 1.0 1 0 0 1 1 1 1 Peptidase family C25 Raptor_N PF14538.6 NODE_78605_length_201_cov_1.415663_g70664_i0forward_frame_1 - 0.029 14.3 0.0 0.054 13.4 0.0 1.6 1 1 0 1 1 1 0 Raptor N-terminal CASPase like domain UL41A PF17591.2 NODE_78604_length_201_cov_1.427711_g70663_i0reverse_frame_1 - 0.065 13.4 0.2 0.069 13.2 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL41A Defensin_2 PF01097.18 NODE_78602_length_201_cov_1.427711_g70661_i0reverse_frame_1 - 0.074 13.0 1.8 3.5 7.7 0.0 2.2 2 0 0 2 2 2 0 Arthropod defensin RVT_2 PF07727.14 NODE_78588_length_201_cov_1.445783_g70647_i0forward_frame_1 - 8.9e-05 22.2 0.0 0.0001 22.1 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) IF-2 PF11987.8 NODE_78583_length_201_cov_1.445783_g70642_i0forward_frame_1 - 0.043 13.9 0.2 0.044 13.9 0.2 1.1 1 0 0 1 1 1 0 Translation-initiation factor 2 Bro-N PF02498.17 NODE_78579_length_201_cov_1.445783_g70638_i0reverse_frame_1 - 0.076 13.7 0.0 0.082 13.6 0.0 1.1 1 0 0 1 1 1 0 BRO family, N-terminal domain DUF148 PF02520.17 NODE_78577_length_201_cov_1.445783_g70636_i0reverse_frame_1 - 0.0021 18.1 0.7 0.0022 18.1 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF148 Sec62 PF03839.16 NODE_78577_length_201_cov_1.445783_g70636_i0forward_frame_1 - 4.5 6.7 6.0 4.8 6.6 6.0 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 PPP4R2 PF09184.11 NODE_78571_length_201_cov_1.493976_g70630_i0reverse_frame_1 - 0.27 10.8 0.2 0.27 10.8 0.2 1.1 1 0 0 1 1 1 0 PPP4R2 Keratin_assoc PF09775.9 NODE_78568_length_201_cov_1.512048_g70627_i0forward_frame_1 - 0.036 13.7 0.1 0.037 13.7 0.1 1.2 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 PNP_UDP_1 PF01048.20 NODE_78557_length_201_cov_1.542169_g70616_i0forward_frame_1 - 0.0015 17.8 0.0 0.0016 17.8 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily ESCRT-II PF05871.12 NODE_78556_length_201_cov_1.548193_g70615_i0forward_frame_1 - 0.0026 18.0 0.7 0.003 17.8 0.7 1.1 1 0 0 1 1 1 1 ESCRT-II complex subunit VAR1 PF05316.12 NODE_78554_length_201_cov_1.578313_g70613_i0reverse_frame_1 - 0.0077 15.3 1.9 0.0086 15.2 1.9 1.0 1 0 0 1 1 1 1 Mitochondrial ribosomal protein (VAR1) Cys_rich_KTR PF14205.6 NODE_78549_length_201_cov_1.590361_g70608_i0forward_frame_1 - 0.097 12.5 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR YppG PF14179.6 NODE_78541_length_201_cov_1.650602_g70600_i0reverse_frame_1 - 0.1 13.3 1.7 0.11 13.3 1.7 1.0 1 0 0 1 1 1 0 YppG-like protein Fungal_KA1 PF16797.5 NODE_78540_length_201_cov_1.650602_g70599_i0reverse_frame_1 - 0.053 13.2 0.0 0.077 12.7 0.0 1.2 1 0 0 1 1 1 0 Fungal kinase associated-1 domain PFK PF00365.20 NODE_78539_length_201_cov_1.650602_g70598_i0forward_frame_1 - 1.7e-07 30.9 0.0 1.7e-07 30.8 0.0 1.0 1 0 0 1 1 1 1 Phosphofructokinase Herpes_US9 PF06072.11 NODE_78531_length_201_cov_1.680723_g70590_i0forward_frame_1 - 0.2 11.6 0.2 0.37 10.7 0.1 1.5 1 1 1 2 2 2 0 Alphaherpesvirus tegument protein US9 Lustrin_cystein PF14625.6 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 0.045 14.1 22.3 0.29 11.5 4.9 3.2 1 1 1 2 2 2 0 Lustrin, cysteine-rich repeated domain Opy2 PF09463.10 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 0.048 14.0 19.2 1.5 9.2 1.1 3.3 2 1 1 3 3 3 0 Opy2 protein Dickkopf_N PF04706.12 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 0.36 11.4 10.0 2.4e+02 2.3 9.9 3.2 1 1 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region TNFR_c6 PF00020.18 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 1.2 9.6 16.7 0.15 12.5 2.3 3.0 2 1 0 2 2 2 0 TNFR/NGFR cysteine-rich region Ephrin_rec_like PF07699.13 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_1 - 7.9 6.3 23.2 1.3 8.8 3.0 3.7 1 1 2 3 3 3 0 Putative ephrin-receptor like B_solenoid_ydck PF18836.1 NODE_78515_length_201_cov_1.861446_g70574_i0forward_frame_1 - 0.092 12.6 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Beta solenoid repeat from YDCK FlgT_N PF16548.5 NODE_78512_length_201_cov_1.879518_g70571_i0reverse_frame_1 - 0.14 12.8 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 Flagellar assembly protein T, N-terminal domain DUF3273 PF11677.8 NODE_78512_length_201_cov_1.879518_g70571_i0forward_frame_1 - 0.053 12.8 0.0 0.053 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3273) PTPS_related PF10131.9 NODE_78510_length_201_cov_1.885542_g70569_i0reverse_frame_1 - 0.13 10.5 2.3 0.15 10.4 2.3 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein FGF PF00167.18 NODE_78508_length_201_cov_1.903614_g70567_i0reverse_frame_1 - 0.032 14.3 0.3 0.033 14.3 0.3 1.1 1 0 0 1 1 1 0 Fibroblast growth factor PolyA_pol PF01743.20 NODE_78506_length_201_cov_1.909639_g70565_i0reverse_frame_1 - 0.023 15.1 1.1 0.025 15.0 1.1 1.0 1 0 0 1 1 1 0 Poly A polymerase head domain DUF4727 PF15856.5 NODE_78501_length_201_cov_1.927711_g70560_i0reverse_frame_1 - 0.056 13.0 0.1 0.059 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4727) Pacifastin_I PF05375.13 NODE_78499_length_201_cov_1.975904_g70558_i0forward_frame_1 - 0.07 12.9 0.2 0.13 12.0 0.2 1.4 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) NYD-SP28 PF14772.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0011 19.0 13.0 0.14 12.2 6.9 2.2 1 1 1 2 2 2 2 Sperm tail Spc7 PF08317.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0042 16.0 7.8 0.0045 15.9 7.8 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF641 PF04859.12 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0072 16.6 5.9 0.0092 16.3 5.9 1.2 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) Spc29 PF17082.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0097 15.8 3.3 0.01 15.7 3.3 1.1 1 0 0 1 1 1 1 Spindle Pole Component 29 Atg14 PF10186.9 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.0097 15.0 5.7 0.01 15.0 5.7 1.0 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 HIP1_clath_bdg PF16515.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.012 16.2 5.0 0.016 15.8 5.0 1.3 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Fez1 PF06818.15 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.019 15.4 4.3 0.022 15.2 4.3 1.1 1 0 0 1 1 1 0 Fez1 CENP-F_leu_zip PF10473.9 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.022 14.8 10.3 0.027 14.5 10.3 1.0 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TMF_DNA_bd PF12329.8 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.026 14.5 13.6 0.58 10.2 5.8 2.3 1 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF5339 PF17274.2 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.032 15.1 1.5 0.2 12.6 0.4 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5339) Pox_A_type_inc PF04508.12 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.032 14.1 14.0 1.1 9.3 0.1 3.9 3 1 1 4 4 4 0 Viral A-type inclusion protein repeat DUF1151 PF06625.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.037 14.0 6.0 0.046 13.7 6.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1151) Med9 PF07544.13 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.044 13.9 10.1 0.055 13.6 4.0 2.2 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 XLF PF09302.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.046 13.9 8.9 1.1 9.4 3.1 2.0 1 1 1 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Sec2p PF06428.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.047 13.7 7.5 1.9 8.5 0.3 2.1 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p PKcGMP_CC PF16808.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.051 13.4 20.3 0.48 10.3 3.6 3.1 1 1 2 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF4200 PF13863.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.06 13.7 10.7 0.25 11.7 10.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) UPF0242 PF06785.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.073 13.2 9.0 0.77 9.8 9.1 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMPIT PF07851.13 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.082 12.1 1.6 0.088 12.0 1.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF3552 PF12072.8 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.12 11.8 10.7 0.13 11.6 10.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Spc42p PF11544.8 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.12 12.4 5.9 0.15 12.0 0.2 2.2 1 1 1 2 2 2 0 Spindle pole body component Spc42p DUF1635 PF07795.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.12 12.2 6.9 0.14 12.0 6.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1635) DUF4349 PF14257.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.13 11.7 4.5 0.16 11.4 4.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) YebO PF13974.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.13 12.3 4.8 0.19 11.8 4.8 1.2 1 0 0 1 1 1 0 YebO-like protein AAA_13 PF13166.6 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.14 10.8 4.4 0.14 10.7 4.4 1.0 1 0 0 1 1 1 0 AAA domain DUF1542 PF07564.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.23 11.6 5.3 0.35 11.0 5.3 1.4 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1542) TMF_TATA_bd PF12325.8 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.26 11.5 12.1 0.38 11.0 3.3 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding FAM76 PF16046.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.28 10.5 5.4 0.29 10.4 5.4 1.0 1 0 0 1 1 1 0 FAM76 protein Csm1_N PF18504.1 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.32 11.4 9.8 1.7 9.0 0.7 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain Fib_alpha PF08702.10 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.38 10.9 3.7 1.1 9.5 3.4 1.6 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DivIC PF04977.15 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.44 10.3 12.1 0.62 9.9 4.5 2.0 1 1 1 2 2 2 0 Septum formation initiator ABC_tran_CTD PF16326.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.58 10.4 14.0 0.94 9.8 14.0 1.3 1 1 0 1 1 1 0 ABC transporter C-terminal domain SlyX PF04102.12 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.65 10.7 9.1 0.55 10.9 3.1 2.0 1 1 1 2 2 2 0 SlyX USP8_interact PF08941.10 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 0.77 9.5 3.2 1 9.1 3.2 1.3 1 1 0 1 1 1 0 USP8 interacting BST2 PF16716.5 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 1 10.0 7.5 4.3 8.0 7.6 1.7 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 APG6_N PF17675.1 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 2.4 8.7 13.5 2.8 8.5 13.5 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region Nup88 PF10168.9 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 2.4 5.9 7.2 2.4 5.9 7.2 1.0 1 0 0 1 1 1 0 Nuclear pore component Histone_HNS PF00816.21 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 4.2 8.3 6.7 6.7 7.6 6.7 1.5 1 1 0 1 1 1 0 H-NS histone family eIF-4B PF06273.11 NODE_78492_length_201_cov_2.024096_g70551_i0reverse_frame_1 - 7.7 5.5 7.0 8.3 5.3 7.0 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Birna_VP5 PF03042.14 NODE_78490_length_201_cov_2.036145_g70549_i0reverse_frame_1 - 0.24 11.4 2.5 0.27 11.2 2.5 1.1 1 0 0 1 1 1 0 Birnavirus VP5 protein zf-RING_2 PF13639.6 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 4.6e-06 26.9 10.9 4.6e-06 26.9 10.9 1.5 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 2.5e-05 24.0 9.2 3.8e-05 23.5 9.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.00065 19.5 12.3 0.00065 19.5 12.3 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.0014 18.4 10.8 0.0014 18.4 10.8 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.0014 18.5 11.0 0.0014 18.5 11.0 2.0 1 1 1 2 2 2 1 zinc-RING finger domain zf-rbx1 PF12678.7 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.0016 18.7 10.4 0.0032 17.7 10.4 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain Zn_ribbon_17 PF17120.5 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.013 15.1 11.8 0.018 14.7 10.0 2.1 2 1 0 2 2 2 0 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.17 11.8 11.3 0.17 11.8 9.4 1.9 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 Zf_RING PF16744.5 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.35 11.0 11.5 0.14 12.3 5.2 2.2 1 1 1 2 2 2 0 KIAA1045 RING finger zf-ANAPC11 PF12861.7 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.47 10.5 6.9 0.83 9.8 6.9 1.6 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 0.84 9.7 12.1 0.071 13.2 5.7 2.2 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING-like PF08746.11 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 2.7 8.4 10.8 0.71 10.2 7.6 1.8 2 1 0 2 2 2 0 RING-like domain zf-RING_11 PF17123.5 NODE_78484_length_201_cov_2.066265_g70543_i0reverse_frame_1 - 6.7 6.6 19.7 0.073 12.8 7.3 2.9 3 1 0 3 3 3 0 RING-like zinc finger Thionin PF00321.17 NODE_78483_length_201_cov_2.072289_g70542_i0reverse_frame_1 - 0.32 11.5 8.9 0.69 10.4 8.9 1.7 1 1 0 1 1 1 0 Plant thionin DUF5510 PF17629.2 NODE_78483_length_201_cov_2.072289_g70542_i0forward_frame_1 - 0.04 13.8 1.6 0.044 13.7 1.6 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5510) Kelch_3 PF13415.6 NODE_78482_length_201_cov_2.084337_g70541_i0forward_frame_1 - 0.19 12.1 0.7 28 5.1 0.0 2.7 3 0 0 3 3 3 0 Galactose oxidase, central domain Exonuc_VIII PF06630.11 NODE_78473_length_201_cov_2.192771_g70532_i0reverse_frame_1 - 0.21 11.4 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Enterobacterial exodeoxyribonuclease VIII PhoLip_ATPase_N PF16209.5 NODE_78466_length_201_cov_2.259036_g70525_i0forward_frame_1 - 0.086 12.5 0.1 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal Response_reg PF00072.24 NODE_78464_length_201_cov_2.271084_g70523_i0forward_frame_1 - 0.0063 16.7 0.0 0.0072 16.5 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain CBF_beta PF02312.17 NODE_78463_length_201_cov_2.277108_g70522_i0reverse_frame_1 - 0.075 12.7 0.1 0.085 12.5 0.1 1.0 1 0 0 1 1 1 0 Core binding factor beta subunit FoP_duplication PF13865.6 NODE_78462_length_201_cov_2.277108_g70521_i0reverse_frame_1 - 0.14 12.8 1.3 0.17 12.5 1.3 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 TT_ORF1 PF02956.14 NODE_78462_length_201_cov_2.277108_g70521_i0reverse_frame_1 - 3.8 6.1 11.3 3.8 6.1 11.3 1.0 1 0 0 1 1 1 0 TT viral orf 1 PIRT PF15099.6 NODE_78460_length_201_cov_2.283133_g70519_i0forward_frame_1 - 0.031 13.9 0.0 0.031 13.8 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Defensin_propep PF00879.18 NODE_78459_length_201_cov_2.289157_g70518_i0forward_frame_1 - 2.3 8.6 5.6 0.84 10.0 3.4 1.4 2 0 0 2 2 2 0 Defensin propeptide PIH1 PF08190.12 NODE_78455_length_201_cov_2.337349_g70514_i0reverse_frame_1 - 0.12 11.8 0.1 0.14 11.6 0.1 1.1 1 0 0 1 1 1 0 PIH1 N-terminal domain GRAM PF02893.20 NODE_78447_length_201_cov_2.560241_g70506_i0forward_frame_1 - 0.0058 16.5 0.1 0.007 16.2 0.1 1.1 1 0 0 1 1 1 1 GRAM domain MFS_1 PF07690.16 NODE_78444_length_201_cov_2.608434_g70503_i0reverse_frame_1 - 1.8e-06 27.1 2.4 1.9e-06 27.0 2.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF2960 PF11173.8 NODE_78440_length_201_cov_2.728916_g70499_i0reverse_frame_1 - 0.064 13.7 0.1 0.078 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2960) DEFB136 PF17333.2 NODE_78436_length_201_cov_2.795181_g70495_i0reverse_frame_1 - 0.068 13.1 5.5 0.1 12.6 5.4 1.5 1 1 0 1 1 1 0 Beta defensin 136 Baculo_ME53 PF06061.11 NODE_78436_length_201_cov_2.795181_g70495_i0forward_frame_1 - 0.03 13.6 0.1 0.03 13.6 0.1 1.0 1 0 0 1 1 1 0 Baculoviridae ME53 Med3 PF11593.8 NODE_78435_length_201_cov_2.795181_g70494_i0reverse_frame_1 - 0.22 10.7 0.7 0.23 10.6 0.7 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUSP PF06337.12 NODE_78434_length_201_cov_2.807229_g70493_i0reverse_frame_1 - 2.2e-09 37.8 0.2 2.4e-09 37.7 0.2 1.0 1 0 0 1 1 1 1 DUSP domain LRR_1 PF00560.33 NODE_78432_length_201_cov_2.837349_g70491_i0forward_frame_1 - 0.098 13.3 2.1 0.86 10.4 2.1 2.2 1 1 0 1 1 1 0 Leucine Rich Repeat MFS_1 PF07690.16 NODE_78428_length_201_cov_3.084337_g70487_i0forward_frame_1 - 3e-05 23.1 6.6 3e-05 23.1 6.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Ham1p_like PF01725.16 NODE_78426_length_201_cov_3.204819_g70485_i0forward_frame_1 - 0.2 11.6 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Ham1 family Sugar_tr PF00083.24 NODE_78424_length_201_cov_3.373494_g70483_i0forward_frame_1 - 0.0065 15.4 0.4 0.0066 15.4 0.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter TMIE PF16038.5 NODE_78413_length_201_cov_4.783133_g70472_i0forward_frame_1 - 2.6 8.0 5.4 4.3 7.2 5.4 1.6 1 1 0 1 1 1 0 TMIE protein Merozoite_SPAM PF07133.11 NODE_78412_length_201_cov_6.355422_g70471_i0reverse_frame_1 - 9.3 6.2 21.0 10 6.1 21.0 1.0 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) DUF2205 PF10224.9 NODE_78406_length_201_cov_19.156627_g70465_i0reverse_frame_1 - 0.052 13.5 0.8 0.052 13.5 0.8 1.9 1 1 1 2 2 2 0 Short coiled-coil protein Ax_dynein_light PF10211.9 NODE_78406_length_201_cov_19.156627_g70465_i0reverse_frame_1 - 0.24 11.3 9.0 0.26 11.2 9.0 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain YfhO PF09586.10 NODE_78406_length_201_cov_19.156627_g70465_i0reverse_frame_1 - 1.8 6.7 4.0 1.9 6.6 4.0 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF4535 PF15054.6 NODE_78406_length_201_cov_19.156627_g70465_i0reverse_frame_1 - 2.5 7.9 5.8 0.92 9.3 3.3 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) DUF3695 PF12494.8 NODE_78403_length_201_cov_23.927711_g70462_i0forward_frame_1 - 0.097 12.6 0.0 0.097 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3695) ATP-synt_DE_N PF02823.16 NODE_78395_length_201_cov_33.536145_g70454_i0forward_frame_1 - 0.12 12.3 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Histone_H2A_C PF16211.5 NODE_78389_length_201_cov_39.734940_g70448_i0reverse_frame_1 - 6 6.7 6.5 10 6.0 6.5 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Vps36-NZF-N PF16988.5 NODE_78388_length_201_cov_40.373494_g70447_i0reverse_frame_1 - 1.2e-05 24.6 0.4 1.2e-05 24.6 0.4 1.4 2 0 0 2 2 2 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain FN3_7 PF18447.1 NODE_78377_length_201_cov_50.078313_g70436_i0reverse_frame_1 - 0.012 15.9 0.4 0.012 15.9 0.4 1.1 1 0 0 1 1 1 0 Fibronectin type III domain RinB PF06116.12 NODE_78374_length_201_cov_50.963855_g70433_i0forward_frame_1 - 0.043 13.9 0.7 0.073 13.2 0.7 1.4 1 0 0 1 1 1 0 Transcriptional activator RinB s48_45 PF07422.13 NODE_78371_length_201_cov_53.439759_g70430_i0forward_frame_1 - 0.07 13.7 0.1 0.08 13.5 0.1 1.1 1 0 0 1 1 1 0 Sexual stage antigen s48/45 domain DUF1972 PF09314.11 NODE_78369_length_201_cov_53.668675_g70428_i0reverse_frame_1 - 0.032 13.8 0.0 0.033 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1972) ROQ_II PF18386.1 NODE_78367_length_201_cov_54.542169_g70426_i0reverse_frame_1 - 0.052 13.4 0.0 0.078 12.8 0.0 1.3 1 0 0 1 1 1 0 Roquin II domain NqrM PF04400.13 NODE_78366_length_201_cov_55.102410_g70425_i0reverse_frame_1 - 0.00014 21.6 0.9 0.00018 21.2 0.9 1.2 1 0 0 1 1 1 1 (Na+)-NQR maturation NqrM DUF2733 PF10813.8 NODE_78363_length_201_cov_62.006024_g70422_i0forward_frame_1 - 8.2 6.3 6.5 0.55 10.0 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) DUF3719 PF12516.8 NODE_78362_length_201_cov_63.024096_g70421_i0reverse_frame_1 - 0.12 12.1 0.4 0.18 11.5 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3719) DUF3135 PF11333.8 NODE_78346_length_201_cov_104.524096_g70405_i0forward_frame_1 - 0.094 13.0 0.1 0.1 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) DUF5541 PF17695.1 NODE_78337_length_201_cov_151.493976_g70396_i0forward_frame_1 - 0.022 15.2 0.0 0.026 14.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5541) DUF5545 PF17699.1 NODE_78334_length_201_cov_169.572289_g70393_i0reverse_frame_1 - 0.13 12.1 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5545) JTB PF05439.12 NODE_78319_length_202_cov_0.784431_g70378_i0reverse_frame_3 - 0.085 12.9 3.6 0.1 12.6 3.6 1.1 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) GCIP PF13324.6 NODE_78319_length_202_cov_0.784431_g70378_i0reverse_frame_2 - 3.9 7.0 6.5 3.8 7.0 6.5 1.0 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting DZR PF12773.7 NODE_78312_length_202_cov_0.946108_g70371_i0reverse_frame_3 - 0.02 14.9 7.6 0.028 14.4 7.6 1.3 1 0 0 1 1 1 0 Double zinc ribbon DUF1682 PF07946.14 NODE_78309_length_202_cov_0.952096_g70368_i0forward_frame_2 - 5.4 6.1 15.4 5.6 6.1 15.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) STAG PF08514.11 NODE_78308_length_202_cov_0.952096_g70367_i0reverse_frame_3 - 0.047 13.6 0.5 0.055 13.4 0.5 1.1 1 0 0 1 1 1 0 STAG domain Tho2 PF11262.8 NODE_78308_length_202_cov_0.952096_g70367_i0reverse_frame_3 - 0.41 9.8 6.3 0.47 9.6 6.3 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 RICTOR_phospho PF14665.6 NODE_78294_length_202_cov_0.958084_g70353_i0forward_frame_2 - 0.076 13.3 0.1 0.079 13.3 0.1 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, phosphorylation-site Urotensin_II PF02083.15 NODE_78285_length_202_cov_0.958084_g70344_i0reverse_frame_2 - 0.28 11.0 2.1 3.4 7.5 0.5 2.5 2 0 0 2 2 2 0 Urotensin II NPBW PF15180.6 NODE_78285_length_202_cov_0.958084_g70344_i0forward_frame_2 - 0.012 15.4 0.5 0.014 15.2 0.5 1.1 1 0 0 1 1 1 0 Neuropeptides B and W DUF2614 PF11023.8 NODE_78280_length_202_cov_0.958084_g70339_i0reverse_frame_3 - 0.048 13.8 1.9 0.046 13.8 1.9 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain CYYR1 PF10873.8 NODE_78280_length_202_cov_0.958084_g70339_i0forward_frame_2 - 0.0086 16.5 0.8 0.0091 16.4 0.8 1.1 1 0 0 1 1 1 1 Cysteine and tyrosine-rich protein 1 DUF1810 PF08837.11 NODE_78271_length_202_cov_0.958084_g70330_i0reverse_frame_2 - 0.19 11.5 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1810) TMEM192 PF14802.6 NODE_78268_length_202_cov_0.958084_g70327_i0reverse_frame_2 - 0.15 11.1 0.2 0.18 10.9 0.2 1.0 1 0 0 1 1 1 0 TMEM192 family TMEM189_B_dmain PF10520.9 NODE_78266_length_202_cov_0.958084_g70325_i0reverse_frame_3 - 0.02 15.0 1.3 0.022 14.9 1.3 1.1 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain ELP6 PF09807.9 NODE_78266_length_202_cov_0.958084_g70325_i0reverse_frame_3 - 0.46 9.8 3.8 0.53 9.7 3.8 1.1 1 0 0 1 1 1 0 Elongation complex protein 6 zf-C2HC5 PF06221.13 NODE_78266_length_202_cov_0.958084_g70325_i0reverse_frame_2 - 0.035 14.1 0.3 0.041 13.9 0.3 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type SGS PF05002.15 NODE_78266_length_202_cov_0.958084_g70325_i0forward_frame_2 - 0.018 15.2 0.3 0.021 14.9 0.3 1.1 1 0 0 1 1 1 0 SGS domain DUF5365 PF17326.2 NODE_78266_length_202_cov_0.958084_g70325_i0forward_frame_2 - 0.025 15.0 0.1 0.03 14.7 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5365) zf-C3H1 PF10650.9 NODE_78263_length_202_cov_0.976048_g70322_i0forward_frame_3 - 0.0086 15.8 1.5 0.015 15.0 0.4 2.0 2 0 0 2 2 2 1 Putative zinc-finger domain L27 PF02828.16 NODE_78262_length_202_cov_0.982036_g70321_i0forward_frame_3 - 0.011 15.4 1.1 1 9.2 0.9 2.2 2 0 0 2 2 2 0 L27 domain Pox_T4_N PF04491.12 NODE_78257_length_202_cov_1.005988_g70316_i0forward_frame_3 - 0.0067 16.2 0.4 0.01 15.7 0.4 1.4 1 0 0 1 1 1 1 Poxvirus T4 protein, N terminus Helicase_RecD PF05127.14 NODE_78250_length_202_cov_1.047904_g70309_i0reverse_frame_2 - 1.4e-17 64.1 0.0 1.5e-17 64.0 0.0 1.0 1 0 0 1 1 1 1 Helicase FOXO_KIX_bdg PF16675.5 NODE_78249_length_202_cov_1.053892_g70308_i0reverse_frame_2 - 0.089 13.1 0.0 0.089 13.1 0.0 1.2 1 0 0 1 1 1 0 KIX-binding domain of forkhead box O, CR2 Spore_IV_A PF09547.10 NODE_78247_length_202_cov_1.053892_g70306_i0forward_frame_2 - 0.026 13.5 0.0 0.031 13.2 0.0 1.1 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) Bromo_TP PF07524.13 NODE_78245_length_202_cov_1.059880_g70304_i0reverse_frame_2 - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Bromodomain associated ADAM_CR_2 PF17771.1 NODE_78245_length_202_cov_1.059880_g70304_i0forward_frame_3 - 0.41 11.2 7.2 2.7 8.6 1.8 2.1 1 1 1 2 2 2 0 ADAM cysteine-rich domain PP2C PF00481.21 NODE_78243_length_202_cov_1.065868_g70302_i0forward_frame_2 - 1.4e-09 37.9 0.0 1.4e-09 37.9 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C ECM1 PF05782.11 NODE_78242_length_202_cov_1.065868_g70301_i0reverse_frame_2 - 0.34 9.8 3.8 0.37 9.7 3.8 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) Pox_A32 PF04665.12 NODE_78239_length_202_cov_1.101796_g70298_i0forward_frame_2 - 0.0076 15.7 0.1 0.0078 15.7 0.1 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein PPR_3 PF13812.6 NODE_78239_length_202_cov_1.101796_g70298_i0forward_frame_2 - 0.064 13.3 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 Pentatricopeptide repeat domain FIST PF08495.10 NODE_78236_length_202_cov_1.113772_g70295_i0forward_frame_3 - 0.13 12.3 0.2 0.15 12.1 0.2 1.0 1 0 0 1 1 1 0 FIST N domain RVT_1 PF00078.27 NODE_78235_length_202_cov_1.113772_g70294_i0forward_frame_3 - 0.003 17.1 0.0 0.003 17.1 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) CYSTM PF12734.7 NODE_78234_length_202_cov_1.119760_g70293_i0reverse_frame_3 - 0.0043 17.3 0.0 0.0058 16.9 0.0 1.3 1 0 0 1 1 1 1 Cysteine-rich TM module stress tolerance LRR_RI_capping PF18779.1 NODE_78233_length_202_cov_1.119760_g70292_i0reverse_frame_3 - 0.025 14.2 0.4 0.039 13.6 0.4 1.4 1 0 0 1 1 1 0 Capping Ribonuclease inhibitor Leucine Rich Repeat SNARE PF05739.19 NODE_78230_length_202_cov_1.137725_g70289_i0forward_frame_2 - 1.4 9.0 3.9 2.1 8.4 3.9 1.3 1 0 0 1 1 1 0 SNARE domain Hep_core_N PF08290.11 NODE_78223_length_202_cov_1.179641_g70282_i0reverse_frame_3 - 0.098 12.6 2.2 4.4 7.4 0.2 2.3 2 0 0 2 2 2 0 Hepatitis core protein, putative zinc finger DDE_Tnp_IS1 PF03400.13 NODE_78223_length_202_cov_1.179641_g70282_i0reverse_frame_2 - 0.079 13.3 0.4 0.12 12.8 0.3 1.4 1 1 1 2 2 2 0 IS1 transposase RVT_1 PF00078.27 NODE_78220_length_202_cov_1.179641_g70279_i0reverse_frame_3 - 0.00011 21.9 0.0 0.00012 21.7 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) CLIP PF12032.8 NODE_78220_length_202_cov_1.179641_g70279_i0reverse_frame_2 - 0.37 11.1 3.0 13 6.1 0.1 2.1 1 1 1 2 2 2 0 Regulatory CLIP domain of proteinases EMP70 PF02990.16 NODE_78217_length_202_cov_1.185629_g70276_i0reverse_frame_3 - 0.077 11.7 0.1 0.081 11.6 0.1 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 DUF2911 PF11138.8 NODE_78217_length_202_cov_1.185629_g70276_i0reverse_frame_2 - 0.031 14.1 0.1 0.035 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2911) NIF PF03031.18 NODE_78212_length_202_cov_1.197605_g70271_i0reverse_frame_3 - 9.2e-16 58.0 0.3 9.8e-16 57.9 0.3 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase RNA_pol_Rpb6 PF01192.22 NODE_78212_length_202_cov_1.197605_g70271_i0forward_frame_3 - 0.16 11.9 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase Rpb6 HMG_box PF00505.19 NODE_78210_length_202_cov_1.197605_g70269_i0forward_frame_2 - 3.8e-05 24.0 0.1 6.2e-05 23.3 0.1 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box Chromosome_seg PF13889.6 NODE_78210_length_202_cov_1.197605_g70269_i0forward_frame_2 - 0.041 14.0 0.1 0.095 12.9 0.0 1.5 2 0 0 2 2 2 0 Chromosome segregation during meiosis HMG_box_2 PF09011.10 NODE_78210_length_202_cov_1.197605_g70269_i0forward_frame_2 - 0.056 14.1 0.0 0.083 13.5 0.0 1.2 1 0 0 1 1 1 0 HMG-box domain CHDNT PF08073.12 NODE_78210_length_202_cov_1.197605_g70269_i0forward_frame_2 - 0.15 12.0 0.3 0.15 12.0 0.3 1.8 2 0 0 2 2 2 0 CHDNT (NUC034) domain BSD PF03909.17 NODE_78209_length_202_cov_1.209581_g70268_i0reverse_frame_3 - 0.2 11.7 0.0 0.22 11.5 0.0 1.1 1 0 0 1 1 1 0 BSD domain RRN9 PF10680.9 NODE_78203_length_202_cov_1.245509_g70262_i0forward_frame_2 - 0.1 12.9 0.0 0.19 12.0 0.0 1.5 2 0 0 2 2 2 0 RNA polymerase I specific transcription initiation factor Kdo PF06293.14 NODE_78199_length_202_cov_1.269461_g70258_i0forward_frame_2 - 0.035 13.4 0.1 0.04 13.3 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RAMP4 PF06624.12 NODE_78198_length_202_cov_1.275449_g70257_i0reverse_frame_3 - 6.6 6.9 6.4 65 3.7 6.4 2.0 1 1 0 1 1 1 0 Ribosome associated membrane protein RAMP4 DUF5554 PF17709.1 NODE_78197_length_202_cov_1.281437_g70256_i0forward_frame_2 - 0.014 15.5 0.7 0.014 15.5 0.7 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5554) Lebercilin PF15619.6 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.003 17.2 2.1 0.0033 17.1 2.1 1.1 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease SPATA1_C PF15743.5 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.004 17.2 1.2 0.0056 16.8 1.2 1.3 1 1 0 1 1 1 1 Spermatogenesis-associated C-terminus CENP-F_leu_zip PF10473.9 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.0056 16.7 4.7 0.0059 16.6 4.7 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cep57_CLD PF14073.6 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.0059 16.7 0.7 0.0065 16.5 0.7 1.1 1 0 0 1 1 1 1 Centrosome localisation domain of Cep57 Cut12 PF11500.8 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.017 15.1 1.2 0.017 15.1 1.2 1.1 1 0 0 1 1 1 0 Spindle pole body formation-associated protein Pox_A_type_inc PF04508.12 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.024 14.5 2.4 0.024 14.5 2.4 2.1 2 1 0 2 2 2 0 Viral A-type inclusion protein repeat KxDL PF10241.9 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.036 14.3 0.9 0.04 14.2 0.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein Csm1_N PF18504.1 NODE_78195_length_202_cov_1.293413_g70254_i0forward_frame_3 - 0.29 11.5 4.5 0.27 11.6 3.0 1.6 1 1 1 2 2 2 0 Csm1 N-terminal domain Peptidase_S8 PF00082.22 NODE_78193_length_202_cov_1.305389_g70252_i0reverse_frame_2 - 0.022 14.0 0.5 0.024 13.9 0.5 1.0 1 0 0 1 1 1 0 Subtilase family MtrC PF04211.13 NODE_78190_length_202_cov_1.311377_g70249_i0reverse_frame_2 - 0.14 11.2 0.0 0.14 11.2 0.0 1.0 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit C DUF5579 PF17742.1 NODE_78189_length_202_cov_1.317365_g70248_i0forward_frame_2 - 0.019 14.5 0.2 0.021 14.4 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5579) CPT_N PF16484.5 NODE_78188_length_202_cov_1.323353_g70247_i0reverse_frame_3 - 0.15 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Carnitine O-palmitoyltransferase N-terminus Tmp39 PF10271.9 NODE_78180_length_202_cov_1.353293_g70239_i0forward_frame_2 - 0.00072 18.7 0.4 0.00078 18.6 0.4 1.0 1 0 0 1 1 1 1 Putative transmembrane protein DUF5516 PF17637.2 NODE_78177_length_202_cov_1.359281_g70236_i0reverse_frame_3 - 0.072 12.9 1.1 0.1 12.3 1.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5516) Aminotran_1_2 PF00155.21 NODE_78176_length_202_cov_1.371257_g70235_i0reverse_frame_3 - 0.061 12.5 0.0 0.066 12.4 0.0 1.0 1 0 0 1 1 1 0 Aminotransferase class I and II Flu_B_NS1 PF02942.14 NODE_78167_length_202_cov_1.407186_g70226_i0reverse_frame_3 - 0.00017 20.7 0.6 0.00018 20.7 0.6 1.1 1 0 0 1 1 1 1 Influenza B non-structural protein (NS1) Spc7 PF08317.11 NODE_78167_length_202_cov_1.407186_g70226_i0reverse_frame_3 - 0.002 17.1 3.6 0.0021 17.0 3.6 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein Mitofilin PF09731.9 NODE_78167_length_202_cov_1.407186_g70226_i0reverse_frame_3 - 0.022 13.6 1.6 0.024 13.5 1.6 1.0 1 0 0 1 1 1 0 Mitochondrial inner membrane protein LepA_C PF06421.12 NODE_78167_length_202_cov_1.407186_g70226_i0reverse_frame_3 - 0.024 14.8 1.3 0.026 14.7 1.3 1.2 1 0 0 1 1 1 0 GTP-binding protein LepA C-terminus DUF2645 PF10840.8 NODE_78166_length_202_cov_1.407186_g70225_i0forward_frame_3 - 0.00021 21.9 5.8 0.00023 21.7 5.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2645) DUF4407 PF14362.6 NODE_78166_length_202_cov_1.407186_g70225_i0forward_frame_3 - 1.5 8.1 2.6 1.6 8.0 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PBP_sp32 PF07222.12 NODE_78163_length_202_cov_1.419162_g70222_i0reverse_frame_3 - 0.0078 15.7 1.5 0.0085 15.6 1.5 1.1 1 0 0 1 1 1 1 Proacrosin binding protein sp32 PHM7_cyt PF14703.6 NODE_78160_length_202_cov_1.431138_g70219_i0reverse_frame_3 - 3.7e-07 30.5 0.1 4e-07 30.4 0.1 1.1 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter Pro_sub2 PF18513.1 NODE_78160_length_202_cov_1.431138_g70219_i0forward_frame_3 - 0.033 14.3 0.7 0.043 14.0 0.7 1.2 1 0 0 1 1 1 0 Prodomain subtilisin 2 Imm43 PF15570.6 NODE_78160_length_202_cov_1.431138_g70219_i0forward_frame_3 - 0.06 13.4 0.3 0.062 13.3 0.3 1.1 1 0 0 1 1 1 0 Immunity protein 43 Transglut_core3 PF13471.6 NODE_78158_length_202_cov_1.431138_g70217_i0forward_frame_3 - 0.058 13.3 3.7 0.065 13.1 3.7 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily zf-HC5HC2H PF13771.6 NODE_78153_length_202_cov_1.437126_g70212_i0reverse_frame_2 - 0.06 13.6 3.9 0.073 13.3 3.9 1.2 1 1 0 1 1 1 0 PHD-like zinc-binding domain DUF295 PF03478.18 NODE_78150_length_202_cov_1.437126_g70209_i0reverse_frame_3 - 0.11 12.1 2.2 0.13 11.8 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF295) PP2C PF00481.21 NODE_78149_length_202_cov_1.437126_g70208_i0reverse_frame_2 - 7e-17 61.9 0.1 7.1e-17 61.9 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Toxin_14 PF07829.11 NODE_78148_length_202_cov_1.437126_g70207_i0forward_frame_2 - 3.4 7.7 10.0 4.6 7.3 1.5 2.7 1 1 1 2 2 2 0 Alpha-A conotoxin PIVA-like protein AIF_C PF14721.6 NODE_78143_length_202_cov_1.467066_g70202_i0reverse_frame_2 - 1.5 9.2 6.4 1.9 8.9 6.4 1.0 1 0 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term Peptidase_S49_N PF08496.10 NODE_78143_length_202_cov_1.467066_g70202_i0reverse_frame_2 - 6.3 6.8 11.8 7 6.7 11.8 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Phage_holin_3_6 PF07332.11 NODE_78143_length_202_cov_1.467066_g70202_i0forward_frame_2 - 0.57 10.2 4.3 0.57 10.2 4.3 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 NODE_78143_length_202_cov_1.467066_g70202_i0forward_frame_2 - 5.2 5.7 7.2 4.8 5.8 7.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MIOX PF05153.15 NODE_78141_length_202_cov_1.479042_g70200_i0reverse_frame_3 - 0.041 13.5 0.0 0.045 13.3 0.0 1.1 1 0 0 1 1 1 0 Myo-inositol oxygenase WD40 PF00400.32 NODE_78140_length_202_cov_1.479042_g70199_i0reverse_frame_2 - 2.3e-05 25.0 0.0 0.00044 21.0 0.0 2.0 2 0 0 2 2 2 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_78140_length_202_cov_1.479042_g70199_i0reverse_frame_2 - 0.0012 19.1 0.0 0.0013 19.0 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 NODE_78140_length_202_cov_1.479042_g70199_i0reverse_frame_2 - 0.023 14.6 0.0 0.025 14.4 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A Glycolipid_bind PF06475.11 NODE_78140_length_202_cov_1.479042_g70199_i0forward_frame_2 - 0.019 14.5 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 Putative glycolipid-binding cEGF PF12662.7 NODE_78138_length_202_cov_1.502994_g70197_i0reverse_frame_2 - 0.061 13.3 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Complement Clr-like EGF-like Pkinase PF00069.25 NODE_78130_length_202_cov_1.544910_g70189_i0forward_frame_2 - 0.14 11.5 1.2 0.15 11.4 1.2 1.0 1 0 0 1 1 1 0 Protein kinase domain Flu_M2 PF00599.17 NODE_78130_length_202_cov_1.544910_g70189_i0forward_frame_2 - 0.19 11.8 1.3 0.21 11.7 1.3 1.1 1 0 0 1 1 1 0 Influenza Matrix protein (M2) Pkinase PF00069.25 NODE_78126_length_202_cov_1.562874_g70185_i0forward_frame_3 - 6.7e-06 25.7 0.0 6.7e-06 25.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain TCR PF03638.15 NODE_78125_length_202_cov_1.562874_g70184_i0forward_frame_3 - 10 6.6 22.4 8.9 6.7 0.5 3.5 1 1 2 3 3 3 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain Phage_fiber_C PF06820.12 NODE_78123_length_202_cov_1.610778_g70182_i0forward_frame_2 - 0.18 12.2 0.0 0.22 11.9 0.0 1.2 1 0 0 1 1 1 0 Putative prophage tail fibre C-terminus DUF2301 PF10063.9 NODE_78121_length_202_cov_1.616766_g70180_i0reverse_frame_3 - 0.13 12.7 0.1 0.16 12.4 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized integral membrane protein (DUF2301) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks404.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks404.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks404.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks404.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ddrB-ParB PF18763.1 NODE_78120_length_202_cov_1.628743_g70179_i0forward_frame_2 - 0.068 13.3 0.1 0.078 13.1 0.1 1.1 1 0 0 1 1 1 0 ddrB-like ParB superfamily domain zf-HC5HC2H_2 PF13832.6 NODE_78117_length_202_cov_1.658683_g70176_i0reverse_frame_3 - 0.011 15.9 1.1 0.011 15.9 1.1 1.2 1 1 0 1 1 1 0 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 NODE_78117_length_202_cov_1.658683_g70176_i0reverse_frame_3 - 0.05 13.9 1.9 0.053 13.8 1.9 1.3 1 1 0 1 1 1 0 PHD-like zinc-binding domain MTA_R1 PF17226.2 NODE_78116_length_202_cov_1.658683_g70175_i0forward_frame_2 - 0.0089 16.2 0.6 0.013 15.6 0.6 1.3 1 0 0 1 1 1 1 MTA R1 domain DUF4080 PF13311.6 NODE_78114_length_202_cov_1.670659_g70173_i0reverse_frame_2 - 0.011 15.9 0.5 0.012 15.8 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4080) EPF PF17181.4 NODE_78113_length_202_cov_1.670659_g70172_i0forward_frame_3 - 0.024 14.6 0.2 0.034 14.2 0.2 1.3 1 0 0 1 1 1 0 Epidermal patterning factor proteins Osw5 PF17062.5 NODE_78111_length_202_cov_1.670659_g70170_i0forward_frame_3 - 0.088 12.9 0.1 0.099 12.7 0.1 1.2 1 0 0 1 1 1 0 Outer spore wall 5 Toxin_37 PF11415.8 NODE_78109_length_202_cov_1.676647_g70168_i0reverse_frame_2 - 0.36 10.7 8.4 1.8 8.5 6.7 2.1 1 1 1 2 2 2 0 Antifungal peptide termicin DUF3884 PF13024.6 NODE_78106_length_202_cov_1.676647_g70165_i0reverse_frame_2 - 0.076 12.6 0.5 0.085 12.4 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3884) VPS28 PF03997.12 NODE_78106_length_202_cov_1.676647_g70165_i0reverse_frame_2 - 0.09 12.4 0.3 0.1 12.2 0.3 1.1 1 0 0 1 1 1 0 VPS28 protein SH3_16 PF18348.1 NODE_78105_length_202_cov_1.676647_g70164_i0forward_frame_2 - 0.045 13.6 0.7 0.12 12.2 0.1 1.8 2 0 0 2 2 2 0 Bacterial dipeptidyl-peptidase Sh3 domain HJURP_C PF12347.8 NODE_78103_length_202_cov_1.688623_g70162_i0reverse_frame_3 - 0.032 14.3 0.0 0.036 14.1 0.0 1.1 1 0 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat DUF1741 PF08427.10 NODE_78103_length_202_cov_1.688623_g70162_i0reverse_frame_2 - 0.035 13.8 0.4 0.04 13.6 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1741) EF-hand_12 PF17901.1 NODE_78103_length_202_cov_1.688623_g70162_i0forward_frame_3 - 0.025 15.0 0.1 0.031 14.7 0.1 1.2 1 0 0 1 1 1 0 EF-hand fold domain FtsK_alpha PF17854.1 NODE_78102_length_202_cov_1.694611_g70161_i0forward_frame_3 - 6.2e-15 55.2 0.1 6.6e-15 55.1 0.1 1.0 1 0 0 1 1 1 1 FtsK alpha domain Lamprin PF06403.11 NODE_78101_length_202_cov_1.700599_g70160_i0forward_frame_2 - 0.072 13.1 0.7 0.073 13.0 0.7 1.1 1 0 0 1 1 1 0 Lamprin TMEM154 PF15102.6 NODE_78100_length_202_cov_1.712575_g70159_i0reverse_frame_3 - 0.068 13.1 0.4 0.072 13.0 0.4 1.1 1 0 0 1 1 1 0 TMEM154 protein family Shisa PF13908.6 NODE_78100_length_202_cov_1.712575_g70159_i0reverse_frame_3 - 0.075 13.3 0.5 0.075 13.3 0.5 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF4872 PF16169.5 NODE_78099_length_202_cov_1.712575_g70158_i0forward_frame_2 - 0.18 11.6 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4872) DUF4892 PF16234.5 NODE_78098_length_202_cov_1.730539_g70157_i0forward_frame_3 - 0.16 11.5 0.1 0.17 11.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4892) DUF981 PF06168.11 NODE_78097_length_202_cov_1.730539_g70156_i0forward_frame_2 - 0.0021 18.0 0.1 0.0023 17.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF981) DUF5474 PF17568.2 NODE_78096_length_202_cov_1.736527_g70155_i0reverse_frame_3 - 0.14 12.3 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5474) FANCL_C PF11793.8 NODE_78095_length_202_cov_1.742515_g70154_i0reverse_frame_3 - 0.75 10.0 10.4 0.92 9.7 10.4 1.2 1 0 0 1 1 1 0 FANCL C-terminal domain Zn_Tnp_IS1595 PF12760.7 NODE_78092_length_202_cov_1.784431_g70151_i0reverse_frame_3 - 0.87 9.6 9.4 3.3 7.8 9.4 1.8 1 1 0 1 1 1 0 Transposase zinc-ribbon domain DUF521 PF04412.13 NODE_78092_length_202_cov_1.784431_g70151_i0forward_frame_2 - 0.059 12.1 0.0 0.067 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF521) MPS-4 PF17523.2 NODE_78090_length_202_cov_1.790419_g70149_i0forward_frame_2 - 0.018 15.2 4.1 0.022 14.9 4.1 1.2 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Toxin_22 PF08092.11 NODE_78086_length_202_cov_1.820359_g70145_i0forward_frame_3 - 0.029 14.4 4.6 0.029 14.4 4.6 2.1 1 1 1 2 2 2 0 Magi peptide toxin family Coat_X PF07552.11 NODE_78084_length_202_cov_1.832335_g70143_i0forward_frame_3 - 0.083 12.7 1.0 0.083 12.7 1.0 1.4 2 0 0 2 2 2 0 Spore Coat Protein X and V domain Glyco_transf_24 PF18404.1 NODE_78084_length_202_cov_1.832335_g70143_i0forward_frame_2 - 0.034 13.6 0.0 0.036 13.5 0.0 1.0 1 0 0 1 1 1 0 Glucosyltransferase 24 TPR_1 PF00515.28 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 3.4e-10 39.3 0.8 2e-07 30.5 0.0 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 1.8e-09 37.0 1.8 8.2e-07 28.7 0.0 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 5e-09 35.7 0.6 8.4e-06 25.4 0.0 2.4 1 1 1 2 2 2 2 TPR repeat TPR_16 PF13432.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 2.4e-06 28.1 1.9 1e-05 26.0 0.7 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.00025 21.3 0.1 0.0015 18.8 0.1 2.0 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.00042 20.9 2.6 0.011 16.4 0.6 2.8 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.00052 20.2 0.0 0.49 10.9 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.002 18.2 0.2 0.025 14.8 0.0 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.012 14.8 0.2 0.016 14.4 0.1 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.013 16.0 0.8 0.17 12.4 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.019 15.1 0.5 0.022 14.9 0.5 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat Maf_N PF08383.11 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.023 14.4 0.6 1.4 8.7 0.0 2.2 2 0 0 2 2 2 0 Maf N-terminal region TPR_6 PF13174.6 NODE_78083_length_202_cov_1.838323_g70142_i0reverse_frame_2 - 0.043 14.5 0.1 0.41 11.4 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat 2_5_RNA_ligase2 PF13563.6 NODE_78083_length_202_cov_1.838323_g70142_i0forward_frame_3 - 0.06 13.3 0.5 0.34 10.8 0.2 1.9 1 1 1 2 2 2 0 2'-5' RNA ligase superfamily mono-CXXC PF15626.6 NODE_78083_length_202_cov_1.838323_g70142_i0forward_frame_3 - 1.5 9.2 8.2 1.2 9.6 0.7 2.4 2 1 0 2 2 2 0 single CXXC unit Lamprin PF06403.11 NODE_78077_length_202_cov_1.880240_g70136_i0forward_frame_2 - 0.099 12.6 15.1 0.082 12.9 7.2 2.0 1 1 1 2 2 2 0 Lamprin Sporozoite_P67 PF05642.11 NODE_78077_length_202_cov_1.880240_g70136_i0forward_frame_2 - 2.4 6.1 3.5 2.8 5.9 3.5 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen GWT1 PF06423.12 NODE_78072_length_202_cov_1.910180_g70131_i0forward_frame_2 - 2.9e-09 37.2 2.6 3.6e-09 36.9 2.6 1.1 1 0 0 1 1 1 1 GWT1 FAM76 PF16046.5 NODE_78068_length_202_cov_1.916168_g70127_i0forward_frame_2 - 0.0073 15.7 0.1 0.0079 15.6 0.1 1.1 1 0 0 1 1 1 1 FAM76 protein CATSPERB PF15149.6 NODE_78068_length_202_cov_1.916168_g70127_i0forward_frame_2 - 0.15 10.6 0.6 0.15 10.6 0.6 1.0 1 0 0 1 1 1 0 Cation channel sperm-associated protein subunit beta protein family PAS_4 PF08448.10 NODE_78066_length_202_cov_1.934132_g70125_i0reverse_frame_2 - 0.011 16.0 0.0 0.012 15.9 0.0 1.1 1 0 0 1 1 1 0 PAS fold amfpi-1 PF12190.8 NODE_78065_length_202_cov_1.946108_g70124_i0reverse_frame_3 - 0.17 12.5 3.1 0.43 11.2 0.5 2.0 1 1 1 2 2 2 0 Fungal protease inhibitor zf-RING_2 PF13639.6 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 7.3e-06 26.2 19.2 8.9e-06 26.0 19.2 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.0002 21.2 16.2 0.00035 20.4 16.2 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.0004 20.2 17.6 0.00072 19.4 17.6 1.4 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.0081 16.0 19.2 0.012 15.4 19.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.019 14.6 12.8 0.021 14.4 12.8 1.1 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_4 PF14570.6 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.019 14.8 15.7 0.61 9.9 15.7 2.1 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain DZR PF12773.7 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.021 14.9 11.8 1.4 9.0 2.4 2.1 1 1 1 2 2 2 0 Double zinc ribbon zf-RING_6 PF14835.6 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.032 14.1 6.0 0.04 13.8 6.0 1.2 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-ribbon_3 PF13248.6 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.054 12.9 0.6 0.054 12.9 0.6 2.5 2 1 0 2 2 2 0 zinc-ribbon domain Ribosomal_L32p PF01783.23 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.07 13.4 3.5 0.38 11.1 0.7 2.2 2 0 0 2 2 2 0 Ribosomal L32p protein family C1_2 PF03107.16 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.65 10.4 13.1 0.44 10.9 7.9 2.0 2 0 0 2 2 2 0 C1 domain zf-LITAF-like PF10601.9 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.68 10.2 15.6 0.2 12.0 9.7 2.2 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain zf-UDP PF14569.6 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 0.75 10.0 10.4 1.2 9.3 10.4 1.4 1 1 0 1 1 1 0 Zinc-binding RING-finger NOB1_Zn_bind PF08772.11 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 3.3 8.0 13.2 2.4 8.4 4.0 2.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like IBR PF01485.21 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 5.5 7.3 18.6 14 6.0 14.4 2.2 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain Prok-RING_4 PF14447.6 NODE_78063_length_202_cov_1.976048_g70122_i0reverse_frame_3 - 9 6.2 21.4 1.6e+02 2.2 0.4 2.8 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 IQ PF00612.27 NODE_78062_length_202_cov_1.982036_g70121_i0reverse_frame_2 - 0.23 11.4 0.3 0.23 11.4 0.3 1.6 2 0 0 2 2 2 0 IQ calmodulin-binding motif DUF2517 PF10725.9 NODE_78062_length_202_cov_1.982036_g70121_i0forward_frame_2 - 0.091 12.5 0.2 0.13 12.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2517) Ribosomal_S12 PF17487.2 NODE_78061_length_202_cov_1.994012_g70120_i0forward_frame_3 - 0.15 12.8 0.4 20 6.0 0.1 2.1 2 0 0 2 2 2 0 Ribosomal protein S12 Zf_RING PF16744.5 NODE_78058_length_202_cov_2.005988_g70117_i0reverse_frame_2 - 0.0055 16.8 0.4 0.0071 16.4 0.1 1.5 1 1 0 1 1 1 1 KIAA1045 RING finger TackOD1 PF18551.1 NODE_78058_length_202_cov_2.005988_g70117_i0reverse_frame_2 - 0.011 15.5 0.1 0.011 15.5 0.1 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 DUF5417 PF17438.2 NODE_78058_length_202_cov_2.005988_g70117_i0reverse_frame_2 - 0.12 12.7 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5417) SBP_bac_3 PF00497.20 NODE_78057_length_202_cov_2.005988_g70116_i0reverse_frame_3 - 9.8e-13 48.1 0.0 1e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 DUF2701 PF10857.8 NODE_78056_length_202_cov_2.005988_g70115_i0forward_frame_2 - 0.18 11.9 0.8 0.25 11.4 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) BRF1 PF07741.13 NODE_78054_length_202_cov_2.029940_g70113_i0forward_frame_3 - 1.5 9.2 14.5 1.9 8.8 14.5 1.1 1 0 0 1 1 1 0 Brf1-like TBP-binding domain CCDC53 PF10152.9 NODE_78054_length_202_cov_2.029940_g70113_i0forward_frame_2 - 5.9 7.3 15.4 6.9 7.1 15.4 1.1 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex DNA_pol_phi PF04931.13 NODE_78054_length_202_cov_2.029940_g70113_i0forward_frame_2 - 9.1 4.2 33.0 9.5 4.2 33.0 1.0 1 0 0 1 1 1 0 DNA polymerase phi DNA_pol3_gamma3 PF12169.8 NODE_78052_length_202_cov_2.041916_g70111_i0forward_frame_2 - 7.3e-12 45.4 0.0 7.7e-12 45.3 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase III subunits gamma and tau domain III DiS_P_DiS PF06750.13 NODE_78050_length_202_cov_2.065868_g70109_i0forward_frame_3 - 0.19 11.9 1.8 2 8.6 0.2 2.0 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain Cys_box PF17869.1 NODE_78047_length_202_cov_2.077844_g70106_i0reverse_frame_3 - 0.00091 19.3 0.6 0.0011 19.1 0.6 1.1 1 0 0 1 1 1 1 Anosmin cysteine rich domain zf-LYAR PF08790.11 NODE_78047_length_202_cov_2.077844_g70106_i0reverse_frame_3 - 0.045 13.7 0.1 0.045 13.7 0.1 2.5 2 1 0 2 2 2 0 LYAR-type C2HC zinc finger CART PF06373.11 NODE_78047_length_202_cov_2.077844_g70106_i0reverse_frame_3 - 0.09 13.0 0.1 0.12 12.6 0.1 1.2 1 0 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) CMV_1a PF12467.8 NODE_78047_length_202_cov_2.077844_g70106_i0forward_frame_2 - 0.024 15.0 0.1 0.024 15.0 0.1 1.0 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein family Keratin_B2_2 PF13885.6 NODE_78046_length_202_cov_2.077844_g70105_i0forward_frame_3 - 3.8 7.5 11.8 49 4.0 11.8 2.1 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein Toxin_8 PF07365.12 NODE_78042_length_202_cov_2.125749_g70101_i0reverse_frame_2 - 2 8.7 6.4 23 5.2 6.4 2.1 1 1 0 1 1 1 0 Alpha conotoxin precursor GIDE PF12483.8 NODE_78039_length_202_cov_2.137725_g70098_i0reverse_frame_3 - 0.028 13.8 0.0 0.033 13.6 0.0 1.1 1 0 0 1 1 1 0 E3 Ubiquitin ligase DUF956 PF06115.11 NODE_78039_length_202_cov_2.137725_g70098_i0reverse_frame_3 - 0.042 13.6 0.0 0.049 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF956) Ig_6 PF18452.1 NODE_78037_length_202_cov_2.143713_g70096_i0reverse_frame_2 - 0.0084 15.7 1.3 0.0084 15.7 1.3 1.8 2 0 0 2 2 2 1 Immunoglobulin domain NCD3G PF07562.14 NODE_78037_length_202_cov_2.143713_g70096_i0forward_frame_3 - 0.00064 19.6 4.6 0.00079 19.3 4.6 1.1 1 0 0 1 1 1 1 Nine Cysteines Domain of family 3 GPCR Herpes_UL73 PF03554.13 NODE_78034_length_202_cov_2.155689_g70093_i0reverse_frame_2 - 0.0079 16.2 0.4 0.0079 16.2 0.4 1.6 2 0 0 2 2 2 1 UL73 viral envelope glycoprotein Pex24p PF06398.11 NODE_78034_length_202_cov_2.155689_g70093_i0reverse_frame_2 - 0.085 11.8 2.3 0.086 11.8 2.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin TACI-CRD2 PF09305.10 NODE_78033_length_202_cov_2.167665_g70092_i0forward_frame_3 - 2.6 8.1 12.2 0.59 10.2 1.1 2.3 2 0 0 2 2 2 0 TACI, cysteine-rich domain Cauli_AT PF03233.13 NODE_78032_length_202_cov_2.203593_g70091_i0reverse_frame_2 - 0.12 12.3 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Aphid transmission protein DUF2070 PF09843.9 NODE_78030_length_202_cov_2.245509_g70089_i0forward_frame_3 - 1.7 6.8 5.7 1.8 6.8 5.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) AmiS_UreI PF02293.15 NODE_78030_length_202_cov_2.245509_g70089_i0forward_frame_2 - 0.043 13.8 3.0 0.048 13.7 3.0 1.0 1 0 0 1 1 1 0 AmiS/UreI family transporter PgaD PF13994.6 NODE_78027_length_202_cov_2.257485_g70086_i0reverse_frame_2 - 0.001 19.1 0.0 0.0012 18.9 0.0 1.1 1 0 0 1 1 1 1 PgaD-like protein NADH_u_ox_C PF12853.7 NODE_78027_length_202_cov_2.257485_g70086_i0forward_frame_2 - 0.23 11.5 0.0 0.31 11.0 0.0 1.2 1 0 0 1 1 1 0 C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit DUF1908 PF08926.11 NODE_78025_length_202_cov_2.293413_g70084_i0forward_frame_2 - 0.12 11.4 1.4 0.14 11.2 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) FOXP-CC PF16159.5 NODE_78024_length_202_cov_2.299401_g70083_i0reverse_frame_2 - 0.12 13.0 2.1 0.15 12.7 2.1 1.1 1 0 0 1 1 1 0 FOXP coiled-coil domain DUF2922 PF11148.8 NODE_78022_length_202_cov_2.317365_g70081_i0forward_frame_3 - 0.16 11.7 0.0 11 5.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2922) Laminin_G_3 PF13385.6 NODE_78020_length_202_cov_2.341317_g70079_i0reverse_frame_2 - 0.0024 18.0 0.1 0.0029 17.8 0.1 1.2 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily TMEM70 PF06979.12 NODE_78018_length_202_cov_2.491018_g70077_i0reverse_frame_3 - 0.094 13.1 3.3 0.1 13.0 3.3 1.0 1 0 0 1 1 1 0 Assembly, mitochondrial proton-transport ATP synth complex E3_UbLigase_RBR PF18091.1 NODE_78017_length_202_cov_2.514970_g70076_i0forward_frame_3 - 0.01 15.9 0.0 0.012 15.8 0.0 1.0 1 0 0 1 1 1 0 E3 Ubiquitin Ligase RBR C-terminal domain Lamprin PF06403.11 NODE_78016_length_202_cov_2.532934_g70075_i0forward_frame_2 - 0.14 12.1 7.5 0.17 11.8 7.4 1.3 1 1 0 1 1 1 0 Lamprin Glyco_transf_15 PF01793.16 NODE_78013_length_202_cov_2.592814_g70072_i0reverse_frame_3 - 0.069 12.4 1.7 0.073 12.3 1.7 1.0 1 0 0 1 1 1 0 Glycolipid 2-alpha-mannosyltransferase TMEM156 PF15106.6 NODE_78011_length_202_cov_2.610778_g70070_i0forward_frame_3 - 0.14 11.5 0.6 0.18 11.2 0.6 1.1 1 0 0 1 1 1 0 TMEM156 protein family Big_5 PF13205.6 NODE_78010_length_202_cov_2.634731_g70069_i0forward_frame_3 - 0.0032 18.1 2.7 0.004 17.8 2.7 1.1 1 0 0 1 1 1 1 Bacterial Ig-like domain REJ PF02010.15 NODE_78010_length_202_cov_2.634731_g70069_i0forward_frame_3 - 0.0033 16.3 0.5 0.0036 16.2 0.5 1.0 1 0 0 1 1 1 1 REJ domain VP40 PF07447.12 NODE_78010_length_202_cov_2.634731_g70069_i0forward_frame_3 - 0.0036 16.5 0.8 0.0039 16.3 0.8 1.0 1 0 0 1 1 1 1 Matrix protein VP40 Herpes_U59 PF04529.12 NODE_78009_length_202_cov_2.676647_g70068_i0forward_frame_2 - 0.0065 15.6 1.6 0.0071 15.5 1.6 1.0 1 0 0 1 1 1 1 Herpesvirus U59 protein DUF5440 PF17509.2 NODE_78005_length_202_cov_2.832335_g70064_i0forward_frame_3 - 0.11 12.1 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5440) DUF5000 PF16391.5 NODE_78004_length_202_cov_2.862275_g70063_i0reverse_frame_3 - 0.033 14.3 0.0 0.036 14.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function zf-C4pol PF14260.6 NODE_78002_length_202_cov_3.023952_g70061_i0reverse_frame_3 - 2.4e-15 56.8 8.4 2.5e-15 56.7 8.4 1.0 1 0 0 1 1 1 1 C4-type zinc-finger of DNA polymerase delta Glyco_transf_8 PF01501.20 NODE_78001_length_202_cov_3.041916_g70060_i0reverse_frame_2 - 2.5e-13 50.2 0.0 2.6e-13 50.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 8 RP854 PF17460.2 NODE_77999_length_202_cov_3.083832_g70058_i0forward_frame_2 - 0.028 14.2 0.7 0.033 13.9 0.7 1.1 1 0 0 1 1 1 0 Uncharacterized protein RP854 HHV6-IE PF03753.13 NODE_77998_length_202_cov_3.113772_g70057_i0reverse_frame_3 - 0.29 8.5 6.2 0.29 8.6 6.2 1.0 1 0 0 1 1 1 0 Human herpesvirus 6 immediate early protein Lamprin PF06403.11 NODE_77997_length_202_cov_3.119760_g70056_i0reverse_frame_3 - 0.00056 19.9 7.5 0.00068 19.6 7.6 1.3 1 1 0 1 1 1 1 Lamprin Oxidored_q4 PF00507.19 NODE_77996_length_202_cov_3.161677_g70055_i0forward_frame_3 - 0.088 13.0 0.0 0.088 13.0 0.0 1.1 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RimK PF08443.11 NODE_77995_length_202_cov_3.185629_g70054_i0reverse_frame_2 - 1.7e-27 96.3 0.2 1.8e-27 96.2 0.2 1.0 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 NODE_77995_length_202_cov_3.185629_g70054_i0reverse_frame_2 - 7e-11 41.8 0.0 7e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_YheCD PF14398.6 NODE_77995_length_202_cov_3.185629_g70054_i0reverse_frame_2 - 0.016 14.5 0.0 0.018 14.3 0.0 1.1 1 0 0 1 1 1 0 YheC/D like ATP-grasp Lig_chan PF00060.26 NODE_77994_length_202_cov_3.245509_g70053_i0reverse_frame_3 - 0.59 10.0 3.9 0.73 9.7 3.9 1.0 1 0 0 1 1 1 0 Ligand-gated ion channel zf-C2H2_3 PF13878.6 NODE_77992_length_202_cov_3.263473_g70051_i0forward_frame_3 - 0.038 13.8 0.2 0.31 10.9 0.1 2.1 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF5313 PF17240.2 NODE_77989_length_202_cov_3.724551_g70048_i0forward_frame_3 - 0.095 13.1 0.1 0.12 12.8 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) BCAS3 PF12490.8 NODE_77987_length_202_cov_3.988024_g70046_i0forward_frame_3 - 0.0071 15.9 0.1 0.0071 15.9 0.1 1.0 1 0 0 1 1 1 1 Breast carcinoma amplified sequence 3 SNARE PF05739.19 NODE_77987_length_202_cov_3.988024_g70046_i0forward_frame_3 - 0.014 15.3 4.1 0.017 15.1 1.4 2.1 2 0 0 2 2 2 0 SNARE domain DUF4491 PF14898.6 NODE_77986_length_202_cov_4.173653_g70045_i0reverse_frame_3 - 0.54 10.7 3.1 0.23 11.9 1.0 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4491) RPS31 PF17067.5 NODE_77981_length_202_cov_4.964072_g70040_i0reverse_frame_3 - 0.073 13.2 0.0 0.082 13.1 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e RRP36 PF06102.12 NODE_77977_length_202_cov_11.844311_g70036_i0forward_frame_2 - 7.6e-08 32.5 7.0 8.8e-08 32.3 7.0 1.0 1 0 0 1 1 1 1 rRNA biogenesis protein RRP36 HEPN_MAE_28990 PF18737.1 NODE_77976_length_202_cov_13.730539_g70035_i0forward_frame_3 - 0.031 14.2 0.3 0.032 14.2 0.3 1.1 1 0 0 1 1 1 0 MAE_28990/MAE_18760-like HEPN SieB PF14163.6 NODE_77974_length_202_cov_18.125749_g70033_i0reverse_frame_3 - 0.053 13.0 0.3 0.054 13.0 0.3 1.1 1 0 0 1 1 1 0 Super-infection exclusion protein B LYRIC PF15686.5 NODE_77973_length_202_cov_19.784431_g70032_i0reverse_frame_3 - 0.86 9.1 10.7 0.99 8.9 10.7 1.0 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family DUF4604 PF15377.6 NODE_77973_length_202_cov_19.784431_g70032_i0reverse_frame_2 - 0.19 12.1 12.2 0.23 11.9 12.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) Sec62 PF03839.16 NODE_77973_length_202_cov_19.784431_g70032_i0reverse_frame_2 - 5.1 6.6 6.6 5.7 6.4 6.6 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 RNA_polI_A34 PF08208.11 NODE_77973_length_202_cov_19.784431_g70032_i0reverse_frame_2 - 7.3 6.6 15.8 11 6.0 15.8 1.3 1 1 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Pho86 PF11124.8 NODE_77972_length_202_cov_21.706587_g70031_i0forward_frame_2 - 0.092 12.2 2.6 0.091 12.2 2.6 1.0 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 AsnC_trans_reg PF01037.21 NODE_77972_length_202_cov_21.706587_g70031_i0forward_frame_2 - 0.093 12.7 0.1 8.2 6.5 0.1 2.1 1 1 1 2 2 2 0 Lrp/AsnC ligand binding domain DUF3438 PF11920.8 NODE_77972_length_202_cov_21.706587_g70031_i0forward_frame_2 - 0.2 10.9 2.0 0.22 10.7 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) Peptidase_S49_N PF08496.10 NODE_77972_length_202_cov_21.706587_g70031_i0forward_frame_2 - 0.21 11.6 6.5 0.24 11.5 6.5 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal MTHFR_C PF12225.8 NODE_77970_length_202_cov_25.508982_g70029_i0forward_frame_2 - 0.022 14.4 7.1 0.027 14.1 7.1 1.1 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal DUF2975 PF11188.8 NODE_77966_length_202_cov_26.604790_g70025_i0forward_frame_2 - 0.37 10.7 2.0 2.5 8.0 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) FixQ PF05545.11 NODE_77962_length_202_cov_33.850299_g70021_i0forward_frame_3 - 2.6 8.1 6.2 3.5 7.7 6.2 1.2 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ MSP PF01716.18 NODE_77958_length_202_cov_35.706587_g70017_i0reverse_frame_2 - 0.054 12.7 0.2 0.06 12.5 0.2 1.1 1 0 0 1 1 1 0 Manganese-stabilising protein / photosystem II polypeptide Interfer-bind PF09294.10 NODE_77952_length_202_cov_38.347305_g70011_i0reverse_frame_2 - 0.067 13.5 0.1 0.075 13.4 0.1 1.1 1 0 0 1 1 1 0 Interferon-alpha/beta receptor, fibronectin type III Collar PF07484.12 NODE_77940_length_202_cov_48.113772_g69999_i0reverse_frame_3 - 0.14 12.2 0.0 0.41 10.7 0.0 1.7 1 1 1 2 2 2 0 Phage Tail Collar Domain HPHLAWLY PF14925.6 NODE_77938_length_202_cov_49.173653_g69997_i0reverse_frame_2 - 0.12 11.0 1.3 0.13 11.0 1.3 1.0 1 0 0 1 1 1 0 Domain of unknown function RCC1_2 PF13540.6 NODE_77937_length_202_cov_49.694611_g69996_i0forward_frame_2 - 1.2e-07 31.4 1.5 1.9e-07 30.7 1.5 1.3 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Fer2_3 PF13085.6 NODE_77935_length_202_cov_51.047904_g69994_i0forward_frame_3 - 0.12 12.4 0.3 0.17 11.9 0.3 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain TMEM154 PF15102.6 NODE_77935_length_202_cov_51.047904_g69994_i0forward_frame_3 - 0.54 10.2 2.1 0.59 10.0 2.1 1.0 1 0 0 1 1 1 0 TMEM154 protein family ETRAMP PF09716.10 NODE_77930_length_202_cov_57.502994_g69989_i0forward_frame_2 - 2.5 8.2 6.8 3.2 7.9 6.8 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF1842 PF08896.10 NODE_77929_length_202_cov_57.844311_g69988_i0reverse_frame_2 - 0.097 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1842) SBF_like PF13593.6 NODE_77928_length_202_cov_57.892216_g69987_i0forward_frame_3 - 0.0075 15.6 2.4 0.0083 15.5 2.4 1.1 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) zf-LITAF-like PF10601.9 NODE_77928_length_202_cov_57.892216_g69987_i0forward_frame_3 - 1.1 9.6 4.2 0.92 9.8 1.3 1.9 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain Vpu PF00558.19 NODE_77926_length_202_cov_62.179641_g69985_i0reverse_frame_3 - 0.23 11.3 1.2 0.26 11.1 1.2 1.1 1 0 0 1 1 1 0 Vpu protein RtcR PF06956.11 NODE_77924_length_202_cov_72.473054_g69983_i0forward_frame_2 - 0.027 13.9 0.0 0.03 13.8 0.0 1.0 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase BNR_2 PF13088.6 NODE_77923_length_202_cov_80.209581_g69982_i0reverse_frame_3 - 0.02 14.2 0.0 0.021 14.1 0.0 1.0 1 0 0 1 1 1 0 BNR repeat-like domain DUSP PF06337.12 NODE_77921_length_202_cov_84.586826_g69980_i0forward_frame_2 - 0.00039 21.0 0.5 0.00045 20.8 0.5 1.1 1 0 0 1 1 1 1 DUSP domain TrmK PF04816.12 NODE_77919_length_202_cov_91.592814_g69978_i0reverse_frame_3 - 0.0035 16.9 0.4 0.0038 16.8 0.4 1.1 1 0 0 1 1 1 1 tRNA (adenine(22)-N(1))-methyltransferase DUF4294 PF14127.6 NODE_77917_length_202_cov_100.305389_g69976_i0forward_frame_3 - 0.086 12.8 0.7 0.11 12.4 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4294) Rsm22 PF09243.10 NODE_77916_length_202_cov_101.335329_g69975_i0reverse_frame_3 - 0.15 11.3 0.5 0.16 11.2 0.5 1.0 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 DUF4578 PF15147.6 NODE_77914_length_202_cov_105.838323_g69973_i0reverse_frame_2 - 0.94 10.4 5.8 0.98 10.3 5.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4578) DUF1480 PF07351.13 NODE_77914_length_202_cov_105.838323_g69973_i0forward_frame_2 - 0.084 13.2 0.2 0.12 12.7 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1480) Competence PF03772.16 NODE_77913_length_202_cov_106.946108_g69972_i0forward_frame_3 - 0.014 14.7 3.5 0.016 14.5 3.5 1.0 1 0 0 1 1 1 0 Competence protein DUF4464 PF14713.6 NODE_77911_length_202_cov_111.802395_g69970_i0forward_frame_2 - 7.1e-18 65.0 0.1 7.6e-18 64.9 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4464) MAR_sialic_bdg PF10564.9 NODE_77903_length_202_cov_142.706587_g69962_i0forward_frame_2 - 0.026 14.6 0.7 0.031 14.3 0.7 1.2 1 0 0 1 1 1 0 Sialic-acid binding micronemal adhesive repeat B277 PF17623.2 NODE_77902_length_202_cov_167.886228_g69961_i0reverse_frame_2 - 0.09 11.8 0.2 0.1 11.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function FecCD PF01032.18 NODE_77897_length_202_cov_310.664671_g69956_i0forward_frame_3 - 0.0038 16.3 0.5 0.004 16.2 0.5 1.0 1 0 0 1 1 1 1 FecCD transport family DUF4312 PF14189.6 NODE_77897_length_202_cov_310.664671_g69956_i0forward_frame_3 - 0.18 11.8 1.0 0.29 11.2 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) Humanin PF15040.6 NODE_77891_length_203_cov_0.857143_g69950_i0reverse_frame_3 - 0.21 11.0 2.6 10 5.6 0.1 3.0 2 1 1 3 3 3 0 Humanin family TMEMspv1-c74-12 PF11044.8 NODE_77891_length_203_cov_0.857143_g69950_i0reverse_frame_2 - 0.1 12.6 0.3 14 5.7 0.1 2.5 2 1 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein BRX PF08381.11 NODE_77890_length_203_cov_0.892857_g69949_i0reverse_frame_2 - 0.17 11.3 0.5 0.28 10.6 0.5 1.3 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 Lamprin PF06403.11 NODE_77888_length_203_cov_0.898810_g69947_i0forward_frame_2 - 0.45 10.5 9.5 2.3 8.2 0.5 2.0 1 1 1 2 2 2 0 Lamprin DUF4441 PF14536.6 NODE_77887_length_203_cov_0.904762_g69946_i0reverse_frame_3 - 0.11 12.6 0.9 0.12 12.6 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) MNSV_P7B PF06692.11 NODE_77885_length_203_cov_0.922619_g69944_i0reverse_frame_3 - 0.018 15.0 0.6 0.023 14.7 0.6 1.3 1 1 0 1 1 1 0 Melon necrotic spot virus P7B protein Pep1_7 PF17232.2 NODE_77884_length_203_cov_0.940476_g69943_i0reverse_frame_3 - 0.074 13.5 0.3 0.083 13.4 0.3 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 PriA_CRR PF18319.1 NODE_77884_length_203_cov_0.940476_g69943_i0forward_frame_3 - 0.046 13.7 0.1 0.078 13.0 0.1 1.4 1 0 0 1 1 1 0 PriA DNA helicase Cys-rich region (CRR) domain API5 PF05918.11 NODE_77881_length_203_cov_0.946429_g69940_i0forward_frame_3 - 0.039 12.8 0.0 0.04 12.7 0.0 1.0 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) Sel1 PF08238.12 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 4.9e-06 27.0 0.5 0.01 16.5 0.1 2.2 2 0 0 2 2 2 2 Sel1 repeat TPR_8 PF13181.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.00025 21.0 0.5 0.00025 21.0 0.5 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.00043 20.5 0.1 0.00052 20.2 0.1 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.0011 19.2 0.1 0.0017 18.6 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.0011 18.9 2.2 0.0018 18.3 0.2 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.0015 18.3 0.4 0.0029 17.4 0.1 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.0027 17.5 0.2 0.0027 17.5 0.2 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.026 14.2 0.3 0.052 13.2 0.3 1.5 1 0 0 1 1 1 0 TPR repeat TPR_3 PF07720.12 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.027 14.5 0.4 2.3 8.3 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.11 13.1 0.0 0.15 12.7 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat MIT PF04212.18 NODE_77878_length_203_cov_0.946429_g69937_i0forward_frame_3 - 0.29 11.2 3.4 2.1 8.5 0.3 2.2 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain DUF2518 PF10726.9 NODE_77877_length_203_cov_0.946429_g69936_i0forward_frame_2 - 0.28 10.8 4.0 0.29 10.8 4.0 1.1 1 0 0 1 1 1 0 Protein of function (DUF2518) DUF4514 PF14986.6 NODE_77872_length_203_cov_0.952381_g69931_i0forward_frame_3 - 0.06 13.3 0.0 0.089 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4514) XG_FTase PF03254.13 NODE_77871_length_203_cov_0.952381_g69930_i0forward_frame_2 - 0.16 10.6 0.1 0.16 10.5 0.1 1.0 1 0 0 1 1 1 0 Xyloglucan fucosyltransferase DUF885 PF05960.11 NODE_77870_length_203_cov_0.952381_g69929_i0forward_frame_3 - 0.16 11.6 0.1 0.16 11.6 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) PNTB_4TM PF12769.7 NODE_77865_length_203_cov_0.952381_g69924_i0forward_frame_3 - 0.083 13.4 0.1 0.12 12.8 0.1 1.3 1 0 0 1 1 1 0 4TM region of pyridine nucleotide transhydrogenase, mitoch DNA_pol3_chi PF04364.13 NODE_77864_length_203_cov_0.952381_g69923_i0forward_frame_3 - 0.0091 16.2 0.0 0.0091 16.2 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase III chi subunit, HolC Lamprin PF06403.11 NODE_77859_length_203_cov_0.952381_g69918_i0forward_frame_2 - 0.16 11.9 0.0 0.19 11.7 0.0 1.0 1 0 0 1 1 1 0 Lamprin SAM_KSR1 PF13543.6 NODE_77858_length_203_cov_0.952381_g69917_i0reverse_frame_2 - 0.069 13.3 0.3 0.21 11.8 0.2 1.7 1 1 1 2 2 2 0 SAM like domain present in kinase suppressor RAS 1 YjeF_N PF03853.15 NODE_77857_length_203_cov_0.952381_g69916_i0forward_frame_2 - 0.0016 18.3 0.4 0.0017 18.3 0.4 1.2 1 0 0 1 1 1 1 YjeF-related protein N-terminus DUF1590 PF07629.11 NODE_77854_length_203_cov_0.952381_g69913_i0reverse_frame_2 - 0.11 12.4 0.2 0.16 11.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1590) Orbi_VP4 PF05059.12 NODE_77853_length_203_cov_0.952381_g69912_i0reverse_frame_3 - 0.17 9.9 0.0 0.17 9.9 0.0 1.0 1 0 0 1 1 1 0 Orbivirus VP4 core protein Helicase_IV_N PF12462.8 NODE_77853_length_203_cov_0.952381_g69912_i0forward_frame_3 - 0.16 11.9 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 DNA helicase IV / RNA helicase N terminal FSH1 PF03959.13 NODE_77850_length_203_cov_0.952381_g69909_i0reverse_frame_2 - 1.4e-05 24.9 0.0 1.4e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Serine hydrolase (FSH1) LSM_int_assoc PF16605.5 NODE_77846_length_203_cov_0.952381_g69905_i0reverse_frame_2 - 0.18 12.0 0.2 0.3 11.2 0.2 1.5 1 1 0 1 1 1 0 LSM-interacting associated unstructured rve_3 PF13683.6 NODE_77845_length_203_cov_0.952381_g69904_i0reverse_frame_3 - 0.098 12.5 0.3 0.74 9.6 0.3 1.9 1 1 1 2 2 2 0 Integrase core domain LRR_5 PF13306.6 NODE_77838_length_203_cov_1.053571_g69897_i0reverse_frame_2 - 0.0099 15.8 0.0 0.011 15.7 0.0 1.0 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) STOP PF05217.12 NODE_77831_length_203_cov_1.077381_g69890_i0forward_frame_3 - 0.39 11.0 8.8 0.74 10.2 8.8 1.4 1 0 0 1 1 1 0 STOP protein NhaB PF06450.12 NODE_77828_length_203_cov_1.089286_g69887_i0forward_frame_2 - 0.032 13.1 0.0 0.035 12.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial Na+/H+ antiporter B (NhaB) Prim_Zn_Ribbon PF08273.12 NODE_77826_length_203_cov_1.089286_g69885_i0forward_frame_2 - 0.048 14.0 0.5 0.072 13.4 0.5 1.3 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase zf_CopZ PF18423.1 NODE_77826_length_203_cov_1.089286_g69885_i0forward_frame_2 - 0.16 12.0 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 Zinc binding domain RRM_1 PF00076.22 NODE_77822_length_203_cov_1.119048_g69881_i0reverse_frame_3 - 0.014 15.2 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CwfJ_C_1 PF04677.15 NODE_77822_length_203_cov_1.119048_g69881_i0reverse_frame_2 - 0.00014 21.7 0.2 0.0002 21.2 0.1 1.3 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 HEAT PF02985.22 NODE_77819_length_203_cov_1.125000_g69878_i0forward_frame_3 - 0.0089 16.2 0.1 0.023 14.9 0.0 1.7 2 0 0 2 2 2 1 HEAT repeat Arm PF00514.23 NODE_77819_length_203_cov_1.125000_g69878_i0forward_frame_3 - 0.016 15.3 0.1 0.034 14.2 0.0 1.6 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat TMEM40 PF15817.5 NODE_77816_length_203_cov_1.154762_g69875_i0reverse_frame_2 - 0.1 12.3 0.3 0.11 12.2 0.3 1.0 1 0 0 1 1 1 0 Transmembrane protein 40 family Rac1 PF09632.10 NODE_77813_length_203_cov_1.178571_g69872_i0reverse_frame_3 - 0.054 12.7 0.2 0.057 12.6 0.2 1.1 1 0 0 1 1 1 0 Rac1-binding domain RNase_H PF00075.24 NODE_77811_length_203_cov_1.184524_g69870_i0reverse_frame_2 - 4.1e-05 23.8 0.0 4.2e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 RNase H ERG2_Sigma1R PF04622.12 NODE_77804_length_203_cov_1.184524_g69863_i0reverse_frame_2 - 0.29 10.5 0.0 0.33 10.3 0.0 1.0 1 0 0 1 1 1 0 ERG2 and Sigma1 receptor like protein MMS1_N PF10433.9 NODE_77803_length_203_cov_1.190476_g69862_i0reverse_frame_2 - 0.13 10.8 0.0 0.14 10.7 0.0 1.0 1 0 0 1 1 1 0 Mono-functional DNA-alkylating methyl methanesulfonate N-term Chitin_synth_1 PF01644.17 NODE_77801_length_203_cov_1.190476_g69860_i0forward_frame_2 - 0.079 12.9 0.1 0.092 12.7 0.1 1.1 1 0 0 1 1 1 0 Chitin synthase RPN6_N PF18055.1 NODE_77798_length_203_cov_1.190476_g69857_i0reverse_frame_3 - 0.11 12.9 0.2 0.12 12.7 0.2 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN6 N-terminal domain Pkinase PF00069.25 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_2 - 2.1e-11 43.7 0.0 2.1e-11 43.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_2 - 5.8e-08 32.3 0.0 6.2e-08 32.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pox_ser-thr_kin PF05445.11 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_2 - 2.8e-05 23.3 0.0 2.8e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase APH PF01636.23 NODE_77794_length_203_cov_1.220238_g69853_i0forward_frame_2 - 0.005 16.8 0.0 0.0051 16.8 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family DUF3664 PF12406.8 NODE_77793_length_203_cov_1.220238_g69852_i0forward_frame_2 - 0.0048 17.5 2.2 0.006 17.2 2.2 1.1 1 0 0 1 1 1 1 Surface protein Sugar_tr PF00083.24 NODE_77792_length_203_cov_1.226190_g69851_i0forward_frame_2 - 0.0021 17.0 1.7 0.0024 16.8 1.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_77792_length_203_cov_1.226190_g69851_i0forward_frame_2 - 0.0022 17.0 0.6 0.0025 16.8 0.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily NTS PF15447.6 NODE_77787_length_203_cov_1.261905_g69846_i0forward_frame_3 - 1.2 9.7 3.2 19 5.9 0.1 2.4 2 1 0 2 2 2 0 N-terminal segments of PfEMP1 Trypan_PARP PF05887.11 NODE_77787_length_203_cov_1.261905_g69846_i0forward_frame_2 - 0.19 11.7 4.5 0.22 11.5 4.5 1.0 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Glycoprotein_G PF00802.19 NODE_77787_length_203_cov_1.261905_g69846_i0forward_frame_2 - 1 8.7 3.9 1.1 8.5 3.9 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Fijivirus_P9-2 PF06837.11 NODE_77786_length_203_cov_1.261905_g69845_i0forward_frame_2 - 4.5 6.7 8.9 1.2 8.5 0.4 2.0 1 1 1 2 2 2 0 Fijivirus P9-2 protein Act-Frag_cataly PF09192.10 NODE_77785_length_203_cov_1.267857_g69844_i0reverse_frame_2 - 0.04 13.3 0.1 0.042 13.2 0.1 1.0 1 0 0 1 1 1 0 Actin-fragmin kinase, catalytic Cys_rich_CWC PF14375.6 NODE_77783_length_203_cov_1.285714_g69842_i0reverse_frame_3 - 0.12 12.7 5.7 0.15 12.5 5.7 1.3 1 0 0 1 1 1 0 Cysteine-rich CWC Fz PF01392.22 NODE_77783_length_203_cov_1.285714_g69842_i0forward_frame_3 - 0.24 12.0 5.2 0.26 11.9 5.2 1.0 1 0 0 1 1 1 0 Fz domain GGDEF PF00990.21 NODE_77777_length_203_cov_1.357143_g69836_i0forward_frame_2 - 4.4e-21 75.3 0.1 4.5e-21 75.3 0.1 1.0 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain DUF4260 PF14079.6 NODE_77776_length_203_cov_1.369048_g69835_i0forward_frame_3 - 0.13 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4260) DUF2752 PF10825.8 NODE_77761_length_203_cov_1.422619_g69820_i0reverse_frame_3 - 0.0077 16.3 0.3 0.012 15.7 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2752) DUF2744 PF10910.8 NODE_77756_length_203_cov_1.428571_g69815_i0forward_frame_3 - 0.16 11.9 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2744) E1-E2_ATPase PF00122.20 NODE_77755_length_203_cov_1.428571_g69814_i0reverse_frame_3 - 0.00022 20.8 0.0 0.00024 20.7 0.0 1.0 1 0 0 1 1 1 1 E1-E2 ATPase DUF4050 PF13259.6 NODE_77754_length_203_cov_1.428571_g69813_i0reverse_frame_3 - 0.082 13.2 0.4 0.09 13.1 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) MRP_L53 PF10780.9 NODE_77752_length_203_cov_1.428571_g69811_i0forward_frame_2 - 0.027 14.6 1.5 3.4 7.9 0.2 2.3 2 0 0 2 2 2 0 39S ribosomal protein L53/MRP-L53 TRIC PF05197.13 NODE_77750_length_203_cov_1.428571_g69809_i0reverse_frame_2 - 0.022 14.3 1.7 0.022 14.3 1.7 1.1 1 0 0 1 1 1 0 TRIC channel Astro_capsid_p2 PF16580.5 NODE_77749_length_203_cov_1.428571_g69808_i0reverse_frame_3 - 0.09 12.2 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 C-terminal tail of astrovirus capsid projection or spike hnRNP_Q_AcD PF18360.1 NODE_77749_length_203_cov_1.428571_g69808_i0forward_frame_2 - 0.0066 16.4 0.1 0.011 15.7 0.1 1.3 1 0 0 1 1 1 1 Heterogeneous nuclear ribonucleoprotein Q acidic domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks405.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks405.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks405.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks405.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:41:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aldedh PF00171.22 NODE_77740_length_203_cov_1.428571_g69799_i0forward_frame_2 - 4.4e-25 88.1 0.5 4.6e-25 88.1 0.5 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DGF-1_4 PF11024.8 NODE_77737_length_203_cov_1.440476_g69796_i0forward_frame_2 - 0.011 16.6 0.1 0.015 16.1 0.1 1.3 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 4 LIN37 PF15306.6 NODE_77735_length_203_cov_1.458333_g69794_i0forward_frame_2 - 0.016 15.5 0.1 0.018 15.3 0.1 1.0 1 0 0 1 1 1 0 LIN37 DUF883 PF05957.13 NODE_77733_length_203_cov_1.494048_g69792_i0forward_frame_3 - 0.13 12.9 0.1 0.13 12.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) CDI PF02234.19 NODE_77733_length_203_cov_1.494048_g69792_i0forward_frame_3 - 0.13 12.5 0.3 0.45 10.7 0.3 1.8 1 1 0 1 1 1 0 Cyclin-dependent kinase inhibitor DUF999 PF06198.11 NODE_77733_length_203_cov_1.494048_g69792_i0forward_frame_2 - 0.027 14.4 0.3 0.03 14.3 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF999) zf-RING_11 PF17123.5 NODE_77732_length_203_cov_1.494048_g69791_i0reverse_frame_3 - 0.018 14.8 1.0 0.018 14.8 1.0 2.7 3 1 0 3 3 3 0 RING-like zinc finger Folliculin PF11704.8 NODE_77731_length_203_cov_1.500000_g69790_i0reverse_frame_2 - 0.094 12.6 0.0 0.098 12.5 0.0 1.0 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport NLE PF08154.12 NODE_77728_length_203_cov_1.511905_g69787_i0reverse_frame_3 - 0.056 14.0 0.1 0.19 12.2 0.1 1.8 1 1 0 1 1 1 0 NLE (NUC135) domain CDH-cyt PF16010.5 NODE_77728_length_203_cov_1.511905_g69787_i0reverse_frame_2 - 0.059 13.1 0.2 0.06 13.0 0.2 1.0 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase SDP_N PF12278.8 NODE_77724_length_203_cov_1.523810_g69783_i0reverse_frame_3 - 0.041 14.0 0.5 0.045 13.9 0.5 1.1 1 0 0 1 1 1 0 Sex determination protein N terminal GBP_repeat PF02526.14 NODE_77722_length_203_cov_1.541667_g69781_i0forward_frame_3 - 0.035 13.8 0.0 0.049 13.4 0.0 1.2 1 0 0 1 1 1 0 Glycophorin-binding protein zf-nanos PF05741.13 NODE_77722_length_203_cov_1.541667_g69781_i0forward_frame_2 - 0.016 15.4 3.9 0.021 15.0 3.9 1.2 1 0 0 1 1 1 0 Nanos RNA binding domain HAP1_N PF04849.13 NODE_77721_length_203_cov_1.547619_g69780_i0reverse_frame_3 - 0.02 14.1 5.3 0.021 14.0 5.3 1.1 1 0 0 1 1 1 0 HAP1 N-terminal conserved region Mto2_bdg PF12808.7 NODE_77721_length_203_cov_1.547619_g69780_i0reverse_frame_3 - 0.035 14.4 2.6 0.035 14.4 2.6 1.9 2 0 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region UPF0242 PF06785.11 NODE_77721_length_203_cov_1.547619_g69780_i0reverse_frame_3 - 0.093 12.8 4.8 0.11 12.6 4.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ABC2_membrane_3 PF12698.7 NODE_77720_length_203_cov_1.547619_g69779_i0reverse_frame_3 - 0.0015 17.7 8.5 0.0015 17.7 8.5 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein DUF4196 PF13846.6 NODE_77720_length_203_cov_1.547619_g69779_i0forward_frame_3 - 0.04 14.1 0.0 0.043 14.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4196) Pox_P21 PF05313.12 NODE_77718_length_203_cov_1.553571_g69777_i0reverse_frame_3 - 0.015 14.9 0.0 0.016 14.8 0.0 1.0 1 0 0 1 1 1 0 Poxvirus P21 membrane protein Pyridoxal_deC PF00282.19 NODE_77718_length_203_cov_1.553571_g69777_i0reverse_frame_3 - 0.12 11.1 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain FANCI_HD1 PF14679.6 NODE_77715_length_203_cov_1.577381_g69774_i0forward_frame_2 - 0.039 13.9 0.2 0.074 13.0 0.2 1.4 1 0 0 1 1 1 0 FANCI helical domain 1 UPF0254 PF06787.11 NODE_77712_length_203_cov_1.595238_g69771_i0forward_frame_3 - 0.066 13.0 0.1 0.069 12.9 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) Caa3_CtaG PF09678.10 NODE_77710_length_203_cov_1.613095_g69769_i0reverse_frame_2 - 0.016 14.6 0.1 0.017 14.6 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) zf-C6H2 PF15801.5 NODE_77709_length_203_cov_1.613095_g69768_i0reverse_frame_3 - 0.011 16.1 0.1 0.017 15.5 0.1 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding CagD PF16567.5 NODE_77708_length_203_cov_1.619048_g69767_i0forward_frame_3 - 0.0095 15.7 1.0 0.01 15.7 1.0 1.0 1 0 0 1 1 1 1 Pathogenicity island component CagD Oleosin PF01277.17 NODE_77703_length_203_cov_1.654762_g69762_i0forward_frame_2 - 0.0042 16.8 0.0 0.0046 16.7 0.0 1.0 1 0 0 1 1 1 1 Oleosin Hist_deacetyl PF00850.19 NODE_77700_length_203_cov_1.666667_g69759_i0reverse_frame_3 - 3.9e-05 23.3 0.0 4.4e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Squash PF00299.18 NODE_77700_length_203_cov_1.666667_g69759_i0reverse_frame_3 - 1.1 9.4 9.1 5.5 7.1 9.1 1.9 1 1 0 1 1 1 0 Squash family serine protease inhibitor SseC PF04888.12 NODE_77698_length_203_cov_1.666667_g69757_i0reverse_frame_2 - 0.056 13.0 1.2 0.065 12.8 1.2 1.0 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family ODAM PF15424.6 NODE_77696_length_203_cov_1.666667_g69755_i0forward_frame_2 - 0.021 14.4 0.1 0.024 14.2 0.1 1.0 1 0 0 1 1 1 0 Odontogenic ameloblast-associated family Tnp_zf-ribbon_2 PF13842.6 NODE_77694_length_203_cov_1.684524_g69753_i0reverse_frame_2 - 0.25 12.2 3.3 0.53 11.1 3.3 1.6 1 0 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon Ole-e-6 PF09253.10 NODE_77691_length_203_cov_1.714286_g69750_i0reverse_frame_3 - 0.054 13.5 1.0 0.054 13.5 1.0 1.6 2 1 0 2 2 2 0 Pollen allergen ole e 6 DUF1431 PF07248.12 NODE_77689_length_203_cov_1.720238_g69748_i0reverse_frame_3 - 0.025 14.9 2.3 0.027 14.8 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1431) Rox3 PF08633.10 NODE_77684_length_203_cov_1.761905_g69743_i0forward_frame_3 - 0.11 12.8 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Rox3 mediator complex subunit IRK_N PF08466.10 NODE_77683_length_203_cov_1.773810_g69742_i0reverse_frame_3 - 0.14 12.3 0.2 0.26 11.5 0.2 1.4 1 0 0 1 1 1 0 Inward rectifier potassium channel N-terminal DUF5483 PF17581.2 NODE_77682_length_203_cov_1.779762_g69741_i0reverse_frame_2 - 0.011 14.6 0.1 0.012 14.5 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5483) Glycos_transf_2 PF00535.26 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 8.7e-15 54.9 0.4 8.7e-15 54.9 0.4 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 0.00033 20.2 0.3 0.00033 20.2 0.3 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 0.00084 19.3 0.0 0.00085 19.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 DUF373 PF04123.13 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 0.022 14.2 0.6 0.026 14.0 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) Glyco_tranf_2_4 PF13704.6 NODE_77681_length_203_cov_1.779762_g69740_i0reverse_frame_3 - 0.039 14.5 0.0 0.042 14.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF3587 PF12132.8 NODE_77680_length_203_cov_1.785714_g69739_i0reverse_frame_2 - 0.029 13.8 0.6 0.03 13.8 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3587) Tfb4 PF03850.14 NODE_77679_length_203_cov_1.791667_g69738_i0forward_frame_3 - 8.7 5.7 10.4 8.7 5.7 10.4 1.1 1 0 0 1 1 1 0 Transcription factor Tfb4 Gate PF07670.14 NODE_77677_length_203_cov_1.791667_g69736_i0reverse_frame_2 - 0.019 15.2 0.1 0.022 15.0 0.1 1.0 1 0 0 1 1 1 0 Nucleoside recognition Humanin PF15040.6 NODE_77673_length_203_cov_1.809524_g69732_i0reverse_frame_2 - 0.056 12.9 1.3 0.18 11.3 1.3 1.8 1 0 0 1 1 1 0 Humanin family Dicty_CTDC PF00526.18 NODE_77670_length_203_cov_1.815476_g69729_i0forward_frame_3 - 0.12 12.3 4.6 0.31 11.0 4.6 1.8 1 1 0 1 1 1 0 Dictyostelium (slime mold) repeat UPF0515 PF15135.6 NODE_77666_length_203_cov_1.851190_g69725_i0forward_frame_3 - 0.0039 16.6 0.2 0.0041 16.5 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein UPF0515 Zn_ribbon_SprT PF17283.2 NODE_77666_length_203_cov_1.851190_g69725_i0forward_frame_3 - 0.024 14.6 0.8 0.032 14.1 0.8 1.2 1 0 0 1 1 1 0 SprT-like zinc ribbon domain RCC1 PF00415.18 NODE_77660_length_203_cov_1.898810_g69719_i0reverse_frame_3 - 3.1e-15 56.5 0.4 5.9e-11 42.8 0.0 2.0 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_77660_length_203_cov_1.898810_g69719_i0reverse_frame_3 - 3.4e-10 39.4 0.3 2.7e-08 33.4 0.2 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF2735 PF10931.8 NODE_77660_length_203_cov_1.898810_g69719_i0reverse_frame_3 - 0.051 14.3 0.1 0.066 13.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2735) ATP-synt_Z PF16594.5 NODE_77660_length_203_cov_1.898810_g69719_i0reverse_frame_2 - 0.18 11.3 0.1 0.23 11.0 0.1 1.2 1 0 0 1 1 1 0 Putative AtpZ or ATP-synthase-associated DUF4337 PF14235.6 NODE_77659_length_203_cov_1.898810_g69718_i0reverse_frame_3 - 0.13 12.4 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Cytochrom_B559 PF00283.19 NODE_77649_length_203_cov_1.988095_g69708_i0reverse_frame_3 - 0.05 13.1 4.1 0.077 12.4 4.1 1.3 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Cnd1_N PF12922.7 NODE_77648_length_203_cov_1.994048_g69707_i0forward_frame_2 - 0.087 12.7 0.1 0.098 12.5 0.1 1.1 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term Kinesin PF00225.23 NODE_77647_length_203_cov_2.005952_g69706_i0forward_frame_3 - 4.2e-24 85.1 0.0 4.5e-24 85.0 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain TEX29 PF15839.5 NODE_77645_length_203_cov_2.029762_g69704_i0forward_frame_3 - 0.04 14.5 0.5 0.05 14.2 0.5 1.2 1 0 0 1 1 1 0 Testis-expressed sequence 29 protein TRIQK PF15168.6 NODE_77641_length_203_cov_2.059524_g69700_i0forward_frame_3 - 0.68 9.9 3.7 0.86 9.5 3.7 1.3 1 0 0 1 1 1 0 Triple QxxK/R motif-containing protein family TMEM154 PF15102.6 NODE_77641_length_203_cov_2.059524_g69700_i0forward_frame_3 - 0.97 9.3 2.7 1.1 9.2 2.7 1.1 1 0 0 1 1 1 0 TMEM154 protein family Microcin PF03526.13 NODE_77638_length_203_cov_2.071429_g69697_i0reverse_frame_3 - 0.026 14.3 2.6 0.026 14.3 2.6 1.6 1 1 1 2 2 2 0 Colicin E1 (microcin) immunity protein RVT_1 PF00078.27 NODE_77636_length_203_cov_2.077381_g69695_i0forward_frame_2 - 0.0097 15.4 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) V_ATPase_prox PF18274.1 NODE_77626_length_203_cov_2.208333_g69685_i0forward_frame_3 - 0.029 14.3 0.2 0.045 13.7 0.2 1.3 1 0 0 1 1 1 0 Vacuolar ATPase Subunit I N-terminal proximal lobe Seadorna_Vp10 PF07322.11 NODE_77624_length_203_cov_2.214286_g69683_i0forward_frame_3 - 0.21 11.0 1.3 0.22 10.9 1.3 1.0 1 0 0 1 1 1 0 Seadornavirus Vp10 Comm PF15957.5 NODE_77620_length_203_cov_2.315476_g69679_i0reverse_frame_2 - 0.14 12.5 5.8 0.16 12.3 5.8 1.2 1 0 0 1 1 1 0 Commissureless HAUS2 PF15003.6 NODE_77620_length_203_cov_2.315476_g69679_i0forward_frame_2 - 0.026 14.2 0.1 0.028 14.2 0.1 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 2 DUF3290 PF11694.8 NODE_77614_length_203_cov_2.434524_g69673_i0forward_frame_2 - 0.024 14.6 0.6 0.027 14.4 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) zf-C2H2 PF00096.26 NODE_77614_length_203_cov_2.434524_g69673_i0forward_frame_2 - 0.047 14.2 0.2 0.089 13.3 0.2 1.5 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf_UBZ PF18439.1 NODE_77614_length_203_cov_2.434524_g69673_i0forward_frame_2 - 0.069 12.8 0.2 0.094 12.3 0.2 1.2 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger RVT_1 PF00078.27 NODE_77612_length_203_cov_2.440476_g69671_i0reverse_frame_2 - 7.8e-05 22.3 0.0 7.9e-05 22.3 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF2499 PF10693.9 NODE_77612_length_203_cov_2.440476_g69671_i0reverse_frame_2 - 0.076 13.3 0.0 0.089 13.1 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2499) zf-C4 PF00105.18 NODE_77605_length_203_cov_2.500000_g69664_i0forward_frame_3 - 0.014 15.9 2.7 0.016 15.6 2.7 1.2 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) UBA2_C PF16195.5 NODE_77603_length_203_cov_2.529762_g69662_i0reverse_frame_2 - 0.066 13.9 0.2 0.076 13.7 0.2 1.1 1 0 0 1 1 1 0 SUMO-activating enzyme subunit 2 C-terminus TF_Zn_Ribbon PF08271.12 NODE_77600_length_203_cov_2.571429_g69659_i0reverse_frame_3 - 0.091 12.3 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding NinE PF05322.11 NODE_77600_length_203_cov_2.571429_g69659_i0reverse_frame_3 - 0.15 12.0 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 NINE Protein TipE PF16972.5 NODE_77599_length_203_cov_2.571429_g69658_i0reverse_frame_3 - 3 6.9 5.7 2.8 7.0 5.7 1.0 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE Aldo_ket_red PF00248.21 NODE_77599_length_203_cov_2.571429_g69658_i0forward_frame_2 - 3.4e-07 29.8 0.0 3.4e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family QLQ PF08880.11 NODE_77599_length_203_cov_2.571429_g69658_i0forward_frame_2 - 0.35 10.6 6.2 3.5 7.5 0.5 3.1 3 0 0 3 3 3 0 QLQ Trp_Tyr_perm PF03222.13 NODE_77596_length_203_cov_2.619048_g69655_i0reverse_frame_2 - 0.11 11.5 0.0 0.13 11.3 0.0 1.0 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family FhuF_C PF11575.8 NODE_77596_length_203_cov_2.619048_g69655_i0forward_frame_2 - 0.017 15.0 0.2 0.034 14.1 0.2 1.5 1 0 0 1 1 1 0 FhuF 2Fe-2S C-terminal domain EAR PF07897.11 NODE_77595_length_203_cov_2.642857_g69654_i0forward_frame_2 - 0.046 13.3 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Ethylene-responsive binding factor-associated repression Tnp_zf-ribbon_2 PF13842.6 NODE_77593_length_203_cov_2.732143_g69652_i0reverse_frame_2 - 0.52 11.2 8.8 1 10.2 8.8 1.7 1 1 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon Flagellar_put PF12611.8 NODE_77593_length_203_cov_2.732143_g69652_i0forward_frame_2 - 0.1 12.4 2.7 0.19 11.5 2.7 1.5 1 0 0 1 1 1 0 Putative flagellar FlxA PF14282.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.0011 19.0 1.3 0.0013 18.7 1.3 1.1 1 0 0 1 1 1 1 FlxA-like protein Snapin_Pallidin PF14712.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.018 15.5 0.1 0.023 15.1 0.1 1.2 1 0 0 1 1 1 0 Snapin/Pallidin DUF4200 PF13863.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.028 14.8 0.3 0.029 14.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) GTP-bdg_M PF16360.5 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.029 14.9 0.7 0.038 14.6 0.7 1.2 1 0 0 1 1 1 0 GTP-binding GTPase Middle Region DUF4298 PF14131.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.03 14.3 0.2 0.036 14.0 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Utp21 PF04192.12 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.045 13.2 0.3 0.054 13.0 0.3 1.0 1 0 0 1 1 1 0 Utp21 specific WD40 associated putative domain DUF5320 PF17253.2 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.046 14.8 0.4 0.054 14.6 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5320) DUF4419 PF14388.6 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.048 13.1 0.1 0.06 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4419) APG6_N PF17675.1 NODE_77588_length_203_cov_2.821429_g69647_i0forward_frame_3 - 0.071 13.6 1.1 0.076 13.5 1.1 1.0 1 0 0 1 1 1 0 Apg6 coiled-coil region Qua1 PF16274.5 NODE_77587_length_203_cov_2.851190_g69646_i0forward_frame_3 - 0.017 15.0 0.0 0.023 14.5 0.0 1.2 1 0 0 1 1 1 0 Qua1 domain Aminotran_3 PF00202.21 NODE_77586_length_203_cov_2.857143_g69645_i0forward_frame_3 - 0.018 13.7 0.0 0.02 13.6 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class-III Colicin_Pyocin PF01320.18 NODE_77586_length_203_cov_2.857143_g69645_i0forward_frame_3 - 0.19 11.9 0.0 0.32 11.1 0.0 1.4 1 0 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein Abhydrolase_1 PF00561.20 NODE_77584_length_203_cov_2.940476_g69643_i0forward_frame_2 - 7.4e-07 29.1 0.1 8.6e-07 28.9 0.1 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_77584_length_203_cov_2.940476_g69643_i0forward_frame_2 - 6.1e-06 25.7 0.0 7e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 NODE_77584_length_203_cov_2.940476_g69643_i0forward_frame_2 - 0.0001 23.0 0.5 0.00013 22.7 0.5 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family EHN PF06441.12 NODE_77584_length_203_cov_2.940476_g69643_i0forward_frame_2 - 0.00022 21.5 0.1 0.00029 21.2 0.1 1.2 1 0 0 1 1 1 1 Epoxide hydrolase N terminus DUF3866 PF12982.7 NODE_77580_length_203_cov_2.988095_g69639_i0reverse_frame_2 - 0.011 14.9 0.4 0.012 14.8 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3866) ATP_synt_H PF05493.13 NODE_77580_length_203_cov_2.988095_g69639_i0forward_frame_3 - 1.5 9.3 5.9 2.3 8.7 5.9 1.3 1 1 0 1 1 1 0 ATP synthase subunit H TTL PF03133.15 NODE_77579_length_203_cov_3.029762_g69638_i0reverse_frame_2 - 5e-12 45.6 0.0 5e-12 45.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_77579_length_203_cov_3.029762_g69638_i0reverse_frame_2 - 0.008 15.5 0.0 0.008 15.5 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp DrrA_P4M PF14860.6 NODE_77578_length_203_cov_3.083333_g69637_i0reverse_frame_3 - 0.018 14.9 0.6 0.019 14.8 0.6 1.1 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain NinB PF05772.12 NODE_77578_length_203_cov_3.083333_g69637_i0reverse_frame_2 - 0.041 13.7 0.8 0.041 13.7 0.8 1.2 1 0 0 1 1 1 0 NinB protein DUF2664 PF10867.8 NODE_77578_length_203_cov_3.083333_g69637_i0reverse_frame_2 - 0.062 13.8 1.2 0.065 13.7 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2664) UPF0524 PF15823.5 NODE_77575_length_203_cov_3.273810_g69634_i0reverse_frame_3 - 0.51 9.7 4.2 0.5 9.7 3.7 1.2 1 1 0 1 1 1 0 UPF0524 of C3orf70 TatD_DNase PF01026.21 NODE_77574_length_203_cov_3.327381_g69633_i0forward_frame_3 - 0.039 13.3 0.6 0.47 9.8 0.6 2.0 1 1 0 1 1 1 0 TatD related DNase Innexin PF00876.18 NODE_77572_length_203_cov_3.392857_g69631_i0forward_frame_2 - 0.0092 15.3 1.5 0.0094 15.3 1.5 1.0 1 0 0 1 1 1 1 Innexin EcoRII-N PF09217.10 NODE_77559_length_203_cov_21.821429_g69618_i0reverse_frame_2 - 0.031 14.0 0.3 0.032 14.0 0.3 1.0 1 0 0 1 1 1 0 Restriction endonuclease EcoRII, N-terminal TRAP-delta PF05404.12 NODE_77559_length_203_cov_21.821429_g69618_i0forward_frame_3 - 0.04 13.4 0.9 0.047 13.2 0.9 1.1 1 0 0 1 1 1 0 Translocon-associated protein, delta subunit precursor (TRAP-delta) SLY PF12485.8 NODE_77558_length_203_cov_21.916667_g69617_i0reverse_frame_2 - 0.017 15.9 4.3 0.022 15.5 4.3 1.2 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein DUF3953 PF13129.6 NODE_77558_length_203_cov_21.916667_g69617_i0reverse_frame_2 - 0.54 10.1 0.0 0.54 10.1 0.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3953) Ferlin_C PF16165.5 NODE_77558_length_203_cov_21.916667_g69617_i0reverse_frame_2 - 0.66 9.9 6.2 0.72 9.8 6.2 1.2 1 0 0 1 1 1 0 Ferlin C-terminus Leader_Thr PF08254.11 NODE_77557_length_203_cov_22.035714_g69616_i0reverse_frame_3 - 0.22 11.3 1.6 0.37 10.6 1.6 1.3 1 0 0 1 1 1 0 Threonine leader peptide DUF412 PF04217.13 NODE_77556_length_203_cov_22.738095_g69615_i0forward_frame_3 - 0.041 13.8 0.0 0.046 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF412 zf-MYND PF01753.18 NODE_77555_length_203_cov_22.839286_g69614_i0reverse_frame_2 - 0.00026 21.0 17.3 0.00038 20.5 17.3 1.3 1 0 0 1 1 1 1 MYND finger VirB3 PF05101.13 NODE_77555_length_203_cov_22.839286_g69614_i0forward_frame_2 - 0.4 11.0 4.3 0.48 10.7 4.3 1.1 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein FWWh PF14922.6 NODE_77553_length_203_cov_24.672619_g69612_i0forward_frame_2 - 1.5 8.7 6.1 1.8 8.5 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function TssO PF17561.2 NODE_77549_length_203_cov_29.750000_g69608_i0reverse_frame_3 - 0.97 9.5 4.4 1 9.5 4.4 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO DUF3969 PF13108.6 NODE_77547_length_203_cov_30.690476_g69606_i0reverse_frame_3 - 0.053 13.5 0.2 0.063 13.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3969) INSIG PF07281.12 NODE_77545_length_203_cov_31.154762_g69604_i0forward_frame_2 - 0.04 13.6 2.4 0.051 13.2 2.4 1.1 1 0 0 1 1 1 0 Insulin-induced protein (INSIG) QueF_N PF14819.6 NODE_77544_length_203_cov_33.833333_g69603_i0reverse_frame_2 - 0.03 14.6 0.1 0.032 14.5 0.1 1.2 1 0 0 1 1 1 0 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term gpUL132 PF11359.8 NODE_77544_length_203_cov_33.833333_g69603_i0forward_frame_3 - 0.78 9.2 3.2 0.87 9.1 3.2 1.0 1 0 0 1 1 1 0 Glycoprotein UL132 YscO-like PF16789.5 NODE_77540_length_203_cov_35.505952_g69599_i0reverse_frame_3 - 0.021 14.9 0.1 0.023 14.7 0.1 1.0 1 0 0 1 1 1 0 YscO-like protein IZUMO PF15005.6 NODE_77540_length_203_cov_35.505952_g69599_i0reverse_frame_3 - 0.033 14.7 0.2 0.034 14.7 0.2 1.0 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DUF4813 PF16072.5 NODE_77537_length_203_cov_36.636905_g69596_i0reverse_frame_2 - 0.029 14.1 11.2 0.033 13.9 11.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4813) Collagen PF01391.18 NODE_77533_length_203_cov_38.982143_g69592_i0reverse_frame_3 - 0.18 11.5 17.5 0.77 9.6 17.5 1.9 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) Pmp3 PF01679.17 NODE_77532_length_203_cov_40.101190_g69591_i0forward_frame_2 - 0.067 13.4 0.6 0.15 12.3 0.6 1.5 1 0 0 1 1 1 0 Proteolipid membrane potential modulator Sa_NUDIX PF18167.1 NODE_77531_length_203_cov_40.726190_g69590_i0forward_frame_2 - 0.05 13.4 0.0 0.064 13.0 0.0 1.1 1 0 0 1 1 1 0 SMODS-associated NUDIX domain DUF3128 PF11326.8 NODE_77529_length_203_cov_44.434524_g69588_i0reverse_frame_3 - 1.7 9.1 7.4 0.95 9.9 3.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3128) VWC PF00093.18 NODE_77529_length_203_cov_44.434524_g69588_i0forward_frame_3 - 0.02 15.2 4.6 0.02 15.2 4.6 1.3 1 1 0 1 1 1 0 von Willebrand factor type C domain FA_hydroxylase PF04116.13 NODE_77526_length_203_cov_45.666667_g69585_i0forward_frame_3 - 0.18 12.1 2.9 0.2 12.0 2.9 1.0 1 0 0 1 1 1 0 Fatty acid hydroxylase superfamily HCV_core PF01542.18 NODE_77523_length_203_cov_51.130952_g69582_i0forward_frame_3 - 0.091 13.2 1.0 0.15 12.5 1.0 1.4 1 0 0 1 1 1 0 Hepatitis C virus core protein TNFR_c6 PF00020.18 NODE_77523_length_203_cov_51.130952_g69582_i0forward_frame_3 - 0.11 12.9 2.6 0.2 12.1 2.6 1.4 1 0 0 1 1 1 0 TNFR/NGFR cysteine-rich region DUF2208 PF09973.9 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.046 13.3 0.3 0.059 13.0 0.3 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) FixH PF05751.11 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.056 13.5 0.1 0.063 13.3 0.1 1.0 1 0 0 1 1 1 0 FixH DUF3301 PF11743.8 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.061 13.0 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) Ctr PF04145.15 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.11 13.1 0.4 0.12 13.0 0.4 1.0 1 0 0 1 1 1 0 Ctr copper transporter family HemY_N PF07219.13 NODE_77520_length_203_cov_55.011905_g69579_i0forward_frame_2 - 0.13 12.5 1.3 0.15 12.3 1.3 1.1 1 0 0 1 1 1 0 HemY protein N-terminus C2 PF00168.30 NODE_77519_length_203_cov_57.065476_g69578_i0forward_frame_2 - 0.0016 18.7 0.0 0.0017 18.6 0.0 1.2 1 0 0 1 1 1 1 C2 domain Pox_VERT_large PF04441.13 NODE_77517_length_203_cov_60.702381_g69576_i0forward_frame_3 - 3.9 5.6 5.4 4.2 5.5 5.4 1.1 1 0 0 1 1 1 0 Poxvirus early transcription factor (VETF), large subunit Pox_TAP PF03355.14 NODE_77516_length_203_cov_61.541667_g69575_i0reverse_frame_3 - 0.02 14.5 0.5 0.023 14.3 0.5 1.1 1 0 0 1 1 1 0 Viral Trans-Activator Protein Glyco_tran_28_C PF04101.16 NODE_77513_length_203_cov_68.589286_g69572_i0forward_frame_3 - 0.012 15.6 0.0 0.012 15.6 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 28 C-terminal domain ETRAMP PF09716.10 NODE_77512_length_203_cov_71.416667_g69571_i0reverse_frame_3 - 0.01 15.8 6.1 0.012 15.6 6.1 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) RSN1_7TM PF02714.15 NODE_77512_length_203_cov_71.416667_g69571_i0forward_frame_2 - 0.027 13.8 3.1 0.029 13.7 3.1 1.1 1 0 0 1 1 1 0 Calcium-dependent channel, 7TM region, putative phosphate PLN_propep PF16485.5 NODE_77509_length_203_cov_78.279762_g69568_i0reverse_frame_3 - 0.011 15.5 0.8 0.022 14.4 0.8 1.5 1 1 0 1 1 1 0 Protealysin propeptide AlaDh_PNT_N PF05222.15 NODE_77503_length_203_cov_98.321429_g69562_i0reverse_frame_2 - 4.2e-09 36.8 0.0 5.2e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, N-terminal domain DUF835 PF05763.12 NODE_77503_length_203_cov_98.321429_g69562_i0reverse_frame_2 - 0.077 12.7 0.1 0.083 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF835) TrmO_C PF18389.1 NODE_77498_length_203_cov_122.011905_g69557_i0reverse_frame_3 - 0.021 14.9 0.0 0.025 14.7 0.0 1.1 1 0 0 1 1 1 0 TrmO C-terminal domain DUF5345 PF17280.2 NODE_77498_length_203_cov_122.011905_g69557_i0forward_frame_3 - 4.3 7.4 5.3 25 4.9 0.1 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5345) DUF1467 PF07330.12 NODE_77498_length_203_cov_122.011905_g69557_i0forward_frame_2 - 0.056 13.4 0.0 0.064 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1467) CD34_antigen PF06365.12 NODE_77493_length_203_cov_210.148810_g69552_i0reverse_frame_2 - 0.0084 15.7 0.3 0.0088 15.6 0.3 1.1 1 0 0 1 1 1 1 CD34/Podocalyxin family Orf78 PF06024.12 NODE_77493_length_203_cov_210.148810_g69552_i0reverse_frame_2 - 0.014 15.7 0.1 0.016 15.5 0.1 1.0 1 0 0 1 1 1 0 Orf78 (ac78) TMEM154 PF15102.6 NODE_77493_length_203_cov_210.148810_g69552_i0reverse_frame_2 - 0.022 14.7 0.2 0.023 14.6 0.2 1.0 1 0 0 1 1 1 0 TMEM154 protein family Mid2 PF04478.12 NODE_77493_length_203_cov_210.148810_g69552_i0reverse_frame_2 - 0.032 14.1 0.7 0.036 13.9 0.7 1.1 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor TMEM132D_C PF15706.5 NODE_77493_length_203_cov_210.148810_g69552_i0reverse_frame_2 - 0.24 11.2 1.6 0.35 10.7 1.6 1.5 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term LCE PF14672.6 NODE_77491_length_203_cov_219.613095_g69550_i0reverse_frame_2 - 5.7 7.6 10.0 18 6.0 4.5 2.2 1 1 1 2 2 2 0 Late cornified envelope zf-nanos PF05741.13 NODE_77488_length_203_cov_298.827381_g69547_i0forward_frame_2 - 0.39 11.0 0.2 0.39 11.0 0.2 2.1 1 1 1 2 2 2 0 Nanos RNA binding domain DUF1416 PF07210.12 NODE_77487_length_203_cov_484.678571_g69546_i0reverse_frame_2 - 0.25 11.2 0.0 0.29 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1416) DUF3272 PF11676.8 NODE_77483_length_204_cov_0.905325_g69542_i0forward_frame_3 - 0.028 14.6 0.0 0.039 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3272) DUF5511 PF17630.2 NODE_77482_length_204_cov_0.917160_g69541_i0forward_frame_3 - 0.066 13.4 0.6 0.088 13.0 0.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5511) SOCS PF12610.8 NODE_77478_length_204_cov_0.940828_g69537_i0forward_frame_2 - 0.053 13.9 0.0 0.071 13.5 0.0 1.2 1 0 0 1 1 1 0 Suppressor of cytokine signalling Herpes_LAMP2 PF06126.11 NODE_77476_length_204_cov_0.940828_g69535_i0forward_frame_3 - 2.5 6.6 9.4 2.8 6.5 9.4 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 RBM1CTR PF08081.11 NODE_77474_length_204_cov_0.940828_g69533_i0reverse_frame_2 - 0.13 12.4 3.5 0.18 11.9 3.5 1.2 1 0 0 1 1 1 0 RBM1CTR (NUC064) family BLI1 PF17324.2 NODE_77473_length_204_cov_0.940828_g69532_i0forward_frame_2 - 0.025 15.2 3.1 0.032 14.9 3.1 1.1 1 0 0 1 1 1 0 BLOC-1 interactor 1 tRNA-synt_1c PF00749.21 NODE_77470_length_204_cov_0.946746_g69529_i0forward_frame_3 - 6.2e-18 64.8 0.0 6.4e-18 64.7 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain DAP10 PF07213.11 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.00099 19.0 0.7 0.0011 18.8 0.7 1.1 1 0 0 1 1 1 1 DAP10 membrane protein TM231 PF10149.9 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.025 13.9 0.3 0.027 13.8 0.3 1.0 1 0 0 1 1 1 0 Transmembrane protein 231 Rax2 PF12768.7 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.031 13.7 0.5 0.031 13.7 0.5 1.0 1 0 0 1 1 1 0 Cortical protein marker for cell polarity TPPK_C PF12555.8 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.046 13.8 9.3 0.046 13.8 9.3 1.5 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal Protocadherin PF08374.11 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 0.064 13.2 0.7 0.065 13.2 0.7 1.0 1 0 0 1 1 1 0 Protocadherin FeoB_associated PF12669.7 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 1 9.8 10.8 1.7 9.1 0.0 2.8 1 1 1 2 2 2 0 FeoB-associated Cys-rich membrane protein DUF3357 PF11837.8 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_3 - 3 8.4 5.8 2.7 8.5 4.7 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF3357) IMUP PF15761.5 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_2 - 2.3 8.9 10.4 2.6 8.8 10.4 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein KcnmB2_inactiv PF09303.10 NODE_77468_length_204_cov_0.946746_g69527_i0reverse_frame_2 - 2.4 8.0 4.7 4.8 7.1 4.7 1.6 1 0 0 1 1 1 0 KCNMB2, ball and chain domain DCB PF16213.5 NODE_77468_length_204_cov_0.946746_g69527_i0forward_frame_2 - 0.35 10.5 1.3 0.43 10.2 1.3 1.0 1 0 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 Transp_inhibit PF18791.1 NODE_77466_length_204_cov_0.946746_g69525_i0forward_frame_2 - 0.2 11.2 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 Transport inhibitor response 1 protein domain BRD4_CDT PF17105.5 NODE_77456_length_204_cov_0.946746_g69515_i0forward_frame_3 - 0.069 12.8 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 C-terminal domain of bromodomain protein 4 Deltameth_res PF16020.5 NODE_77451_length_204_cov_0.946746_g69510_i0forward_frame_3 - 0.029 14.2 0.1 0.041 13.8 0.1 1.2 1 0 0 1 1 1 0 Deltamethrin resistance LCIB_C_CA PF18599.1 NODE_77450_length_204_cov_0.946746_g69509_i0forward_frame_2 - 0.2 10.9 0.0 0.21 10.9 0.0 1.0 1 0 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases Renin_r PF07850.14 NODE_77447_length_204_cov_0.958580_g69506_i0reverse_frame_2 - 0.017 15.7 0.3 0.018 15.6 0.3 1.2 1 0 0 1 1 1 0 Renin receptor-like protein DUF1244 PF06844.11 NODE_77447_length_204_cov_0.958580_g69506_i0reverse_frame_2 - 0.17 12.1 0.7 0.2 11.8 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1244) Orai-1 PF07856.12 NODE_77447_length_204_cov_0.958580_g69506_i0forward_frame_3 - 0.014 15.0 0.3 0.015 15.0 0.3 1.1 1 0 0 1 1 1 0 Mediator of CRAC channel activity DUF3810 PF12725.7 NODE_77447_length_204_cov_0.958580_g69506_i0forward_frame_3 - 0.026 13.9 1.9 0.028 13.8 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) RMP PF14996.6 NODE_77445_length_204_cov_0.988166_g69504_i0reverse_frame_2 - 0.011 16.0 1.6 0.013 15.8 1.6 1.0 1 0 0 1 1 1 0 Retinal Maintenance FxsA PF04186.13 NODE_77444_length_204_cov_0.988166_g69503_i0forward_frame_3 - 0.013 15.6 0.0 0.014 15.5 0.0 1.1 1 0 0 1 1 1 0 FxsA cytoplasmic membrane protein DUF3373 PF11853.8 NODE_77434_length_204_cov_1.065089_g69493_i0forward_frame_3 - 0.12 11.4 0.6 0.14 11.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3373) Alba PF01918.21 NODE_77433_length_204_cov_1.071006_g69492_i0forward_frame_2 - 0.069 13.0 0.2 0.11 12.3 0.2 1.3 1 0 0 1 1 1 0 Alba DUF2207 PF09972.9 NODE_77432_length_204_cov_1.112426_g69491_i0forward_frame_2 - 0.062 12.1 0.2 0.07 11.9 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) cEGF PF12662.7 NODE_77426_length_204_cov_1.147929_g69485_i0forward_frame_3 - 0.017 15.0 6.1 0.092 12.7 6.1 2.1 1 1 0 1 1 1 0 Complement Clr-like EGF-like VF530 PF09905.9 NODE_77425_length_204_cov_1.159763_g69484_i0reverse_frame_3 - 0.069 13.3 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 DNA-binding protein VF530 FIIND PF13553.6 NODE_77424_length_204_cov_1.159763_g69483_i0reverse_frame_2 - 0.064 12.7 0.1 0.065 12.6 0.1 1.0 1 0 0 1 1 1 0 Function to find Piezo_RRas_bdg PF12166.8 NODE_77418_length_204_cov_1.183432_g69477_i0reverse_frame_2 - 0.085 12.1 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain Mur_ligase PF01225.25 NODE_77418_length_204_cov_1.183432_g69477_i0forward_frame_3 - 0.0069 16.7 0.2 0.0086 16.4 0.2 1.1 1 0 0 1 1 1 1 Mur ligase family, catalytic domain PUF PF00806.19 NODE_77417_length_204_cov_1.183432_g69476_i0reverse_frame_3 - 7.5e-09 34.8 0.0 0.00083 18.9 0.0 2.2 2 0 0 2 2 2 2 Pumilio-family RNA binding repeat CwsA PF10814.8 NODE_77416_length_204_cov_1.183432_g69475_i0reverse_frame_3 - 0.042 14.0 0.1 0.046 13.9 0.1 1.2 1 0 0 1 1 1 0 Cell wall synthesis protein CwsA PNK3P PF08645.11 NODE_77415_length_204_cov_1.189349_g69474_i0reverse_frame_3 - 4.6e-07 29.7 0.1 6.8e-07 29.1 0.1 1.2 1 0 0 1 1 1 1 Polynucleotide kinase 3 phosphatase Phage_BR0599 PF09356.10 NODE_77412_length_204_cov_1.218935_g69471_i0forward_frame_3 - 0.14 12.5 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Phage conserved hypothetical protein BR0599 Avian_gp85 PF03708.14 NODE_77412_length_204_cov_1.218935_g69471_i0forward_frame_2 - 0.1 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Avian retrovirus envelope protein, gp85 BphX PF06139.12 NODE_77411_length_204_cov_1.218935_g69470_i0forward_frame_2 - 0.024 14.5 0.0 0.025 14.5 0.0 1.0 1 0 0 1 1 1 0 BphX-like DNA_pol_B PF00136.21 NODE_77410_length_204_cov_1.218935_g69469_i0forward_frame_3 - 8.9e-22 77.4 0.2 9.1e-22 77.4 0.2 1.0 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_2 PF03175.13 NODE_77410_length_204_cov_1.218935_g69469_i0forward_frame_3 - 0.0012 17.8 0.4 0.0012 17.8 0.4 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral PAN_1 PF00024.26 NODE_77409_length_204_cov_1.230769_g69468_i0forward_frame_2 - 0.029 14.3 0.0 0.036 14.0 0.0 1.1 1 0 0 1 1 1 0 PAN domain Hum_adeno_E3A PF05393.11 NODE_77403_length_204_cov_1.248521_g69462_i0reverse_frame_3 - 0.04 13.9 0.2 0.046 13.7 0.2 1.2 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein tRNA-synt_1e PF01406.19 NODE_77401_length_204_cov_1.266272_g69460_i0reverse_frame_2 - 3.3e-26 92.3 2.0 3.4e-26 92.3 2.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 NODE_77401_length_204_cov_1.266272_g69460_i0reverse_frame_2 - 3.9e-06 25.9 0.1 4.4e-06 25.7 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (M) TNFR_c6 PF00020.18 NODE_77400_length_204_cov_1.272189_g69459_i0forward_frame_3 - 0.0069 16.8 0.4 0.011 16.2 0.4 1.4 1 0 0 1 1 1 1 TNFR/NGFR cysteine-rich region Fer4_6 PF12837.7 NODE_77400_length_204_cov_1.272189_g69459_i0forward_frame_3 - 0.13 12.4 0.2 0.13 12.4 0.2 1.9 2 0 0 2 2 2 0 4Fe-4S binding domain BTK PF00779.19 NODE_77399_length_204_cov_1.272189_g69458_i0reverse_frame_3 - 0.63 9.9 8.0 4.7 7.1 0.3 2.4 2 0 0 2 2 2 0 BTK motif Chlam_OMP3 PF03503.13 NODE_77398_length_204_cov_1.284024_g69457_i0reverse_frame_3 - 0.041 14.2 0.2 0.052 13.9 0.2 1.2 1 0 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 3 Imm12 PF15560.6 NODE_77395_length_204_cov_1.295858_g69454_i0reverse_frame_2 - 0.08 12.9 0.0 0.089 12.7 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 12 Med16 PF11635.8 NODE_77389_length_204_cov_1.337278_g69448_i0forward_frame_2 - 0.25 9.2 2.2 0.24 9.3 2.2 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 gp45-slide_C PF09116.10 NODE_77386_length_204_cov_1.355030_g69445_i0reverse_frame_2 - 0.085 12.9 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 gp45 sliding clamp, C terminal FXa_inhibition PF14670.6 NODE_77382_length_204_cov_1.396450_g69441_i0reverse_frame_3 - 0.0016 18.6 3.8 0.52 10.6 0.2 2.2 2 0 0 2 2 2 2 Coagulation Factor Xa inhibitory site EGF_3 PF12947.7 NODE_77382_length_204_cov_1.396450_g69441_i0reverse_frame_3 - 0.018 15.2 0.0 0.018 15.2 0.0 1.9 2 1 0 2 2 2 0 EGF domain hEGF PF12661.7 NODE_77382_length_204_cov_1.396450_g69441_i0reverse_frame_3 - 0.22 12.2 1.1 0.22 12.2 1.1 2.3 2 1 0 2 2 2 0 Human growth factor-like EGF Phage_Coat_A PF05357.13 NODE_77380_length_204_cov_1.408284_g69439_i0forward_frame_3 - 0.044 13.6 0.0 0.05 13.4 0.0 1.1 1 0 0 1 1 1 0 Phage Coat Protein A PHD_3 PF13922.6 NODE_77375_length_204_cov_1.414201_g69434_i0reverse_frame_3 - 0.08 13.3 0.3 0.11 12.9 0.3 1.2 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks406.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks406.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks406.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks406.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:44 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Sec8_exocyst PF04048.14 NODE_77368_length_204_cov_1.420118_g69427_i0forward_frame_3 - 0.015 15.2 0.8 0.017 15.0 0.8 1.0 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain DUF4743 PF15916.5 NODE_77368_length_204_cov_1.420118_g69427_i0forward_frame_2 - 0.068 13.1 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4743) Ax_dynein_light PF10211.9 NODE_77367_length_204_cov_1.420118_g69426_i0reverse_frame_3 - 0.13 12.2 0.0 0.14 12.1 0.0 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain Transp_cyt_pur PF02133.15 NODE_77364_length_204_cov_1.420118_g69423_i0reverse_frame_3 - 0.089 11.5 0.3 0.1 11.4 0.3 1.0 1 0 0 1 1 1 0 Permease for cytosine/purines, uracil, thiamine, allantoin Pkinase_Tyr PF07714.17 NODE_77362_length_204_cov_1.461538_g69421_i0forward_frame_3 - 0.053 12.8 0.1 0.054 12.8 0.1 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase Barwin PF00967.17 NODE_77356_length_204_cov_1.520710_g69415_i0reverse_frame_2 - 0.14 12.0 0.2 0.14 12.0 0.2 1.2 1 0 0 1 1 1 0 Barwin family EGF_2 PF07974.13 NODE_77350_length_204_cov_1.544379_g69409_i0forward_frame_3 - 3.9 7.9 10.6 0.57 10.6 6.1 2.0 2 1 0 2 2 2 0 EGF-like domain DUF3649 PF12365.8 NODE_77341_length_204_cov_1.585799_g69400_i0forward_frame_2 - 0.031 14.0 1.3 0.037 13.7 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3649) Ribonuc_L-PSP PF01042.21 NODE_77340_length_204_cov_1.591716_g69399_i0forward_frame_2 - 2.5e-16 59.8 0.0 2.6e-16 59.7 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP SLBB PF10531.9 NODE_77340_length_204_cov_1.591716_g69399_i0forward_frame_2 - 0.12 12.2 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 SLBB domain ArsB PF02040.15 NODE_77339_length_204_cov_1.591716_g69398_i0reverse_frame_2 - 0.031 13.6 1.4 0.033 13.5 1.4 1.0 1 0 0 1 1 1 0 Arsenical pump membrane protein CaKB PF03185.15 NODE_77339_length_204_cov_1.591716_g69398_i0reverse_frame_2 - 0.097 12.3 0.5 0.096 12.3 0.5 1.0 1 0 0 1 1 1 0 Calcium-activated potassium channel, beta subunit TssN PF17555.2 NODE_77339_length_204_cov_1.591716_g69398_i0reverse_frame_2 - 0.14 11.5 4.9 0.15 11.4 4.9 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF5480 PF17576.2 NODE_77339_length_204_cov_1.591716_g69398_i0reverse_frame_2 - 0.69 9.9 0.1 0.69 9.9 0.1 2.3 2 1 0 2 2 2 0 Family of unknown function (DUF5480) AAA PF00004.29 NODE_77338_length_204_cov_1.597633_g69397_i0reverse_frame_2 - 0.02 15.3 0.0 0.021 15.3 0.0 1.0 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TGF_beta_GS PF08515.12 NODE_77337_length_204_cov_1.597633_g69396_i0forward_frame_3 - 0.26 10.8 0.3 0.26 10.8 0.3 2.9 3 0 0 3 3 3 0 Transforming growth factor beta type I GS-motif FBA_3 PF08268.12 NODE_77334_length_204_cov_1.621302_g69393_i0reverse_frame_3 - 0.011 15.7 0.1 0.012 15.5 0.1 1.1 1 0 0 1 1 1 0 F-box associated domain Hyphal_reg_CWP PF11765.8 NODE_77334_length_204_cov_1.621302_g69393_i0reverse_frame_3 - 0.084 11.8 0.0 0.09 11.7 0.0 1.0 1 0 0 1 1 1 0 Hyphally regulated cell wall protein N-terminal DUF4946 PF16304.5 NODE_77327_length_204_cov_1.650888_g69386_i0forward_frame_3 - 0.19 11.4 0.1 0.21 11.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4946) Chorion_2 PF03964.15 NODE_77324_length_204_cov_1.656805_g69383_i0forward_frame_2 - 0.058 14.2 0.9 0.067 14.0 0.9 1.1 1 0 0 1 1 1 0 Chorion family 2 DUF4767 PF15983.5 NODE_77323_length_204_cov_1.662722_g69382_i0reverse_frame_2 - 0.099 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4767) YhfT PF10797.9 NODE_77323_length_204_cov_1.662722_g69382_i0forward_frame_2 - 0.062 12.3 0.0 0.069 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF4234 PF14018.6 NODE_77322_length_204_cov_1.698225_g69381_i0reverse_frame_3 - 0.044 13.9 0.1 0.066 13.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4234) DUF1947 PF09183.10 NODE_77322_length_204_cov_1.698225_g69381_i0reverse_frame_2 - 0.043 14.1 0.0 0.052 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1947) YjcB PF15940.5 NODE_77322_length_204_cov_1.698225_g69381_i0forward_frame_3 - 0.037 14.2 0.0 0.044 14.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function TMEM220 PF15071.6 NODE_77321_length_204_cov_1.698225_g69380_i0reverse_frame_3 - 0.049 14.4 1.5 0.055 14.2 1.5 1.2 1 0 0 1 1 1 0 Transmembrane family 220, helix DUF3330 PF11809.8 NODE_77321_length_204_cov_1.698225_g69380_i0reverse_frame_3 - 0.25 11.4 2.6 0.39 10.8 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3330) PYNP_C PF07831.13 NODE_77320_length_204_cov_1.727811_g69379_i0reverse_frame_3 - 0.16 11.6 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Pyrimidine nucleoside phosphorylase C-terminal domain Prok-RING_2 PF14445.6 NODE_77320_length_204_cov_1.727811_g69379_i0forward_frame_2 - 0.018 15.2 0.4 0.27 11.4 0.2 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 2 zf-C2H2_12 PF18658.1 NODE_77320_length_204_cov_1.727811_g69379_i0forward_frame_2 - 0.044 13.3 0.1 0.058 13.0 0.1 1.2 1 0 0 1 1 1 0 Zinc-finger C2H2-type PHD_3 PF13922.6 NODE_77318_length_204_cov_1.751479_g69377_i0forward_frame_3 - 0.045 14.1 0.2 0.075 13.4 0.2 1.4 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx DUF1573 PF07610.11 NODE_77315_length_204_cov_1.769231_g69374_i0forward_frame_3 - 0.018 15.0 0.6 0.023 14.7 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1573) MORN PF02493.20 NODE_77315_length_204_cov_1.769231_g69374_i0forward_frame_2 - 1.5e-08 34.0 0.5 4.7e-05 23.0 0.2 2.5 2 0 0 2 2 2 2 MORN repeat 53-BP1_Tudor PF09038.10 NODE_77315_length_204_cov_1.769231_g69374_i0forward_frame_2 - 0.091 12.7 0.3 0.11 12.5 0.3 1.3 1 1 0 1 1 1 0 Tumour suppressor p53-binding protein-1 Tudor Ribul_P_3_epim PF00834.19 NODE_77315_length_204_cov_1.769231_g69374_i0forward_frame_2 - 0.15 11.4 0.0 0.24 10.8 0.0 1.3 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family DDE_3 PF13358.6 NODE_77314_length_204_cov_1.775148_g69373_i0forward_frame_2 - 0.083 12.6 0.2 0.083 12.6 0.2 1.0 1 0 0 1 1 1 0 DDE superfamily endonuclease zf-C3HC4 PF00097.25 NODE_77313_length_204_cov_1.798817_g69372_i0forward_frame_3 - 1.5 8.8 18.9 0.24 11.3 9.0 2.8 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) PsbX PF06596.11 NODE_77312_length_204_cov_1.846154_g69371_i0reverse_frame_2 - 3.6 7.6 8.6 21 5.2 0.1 2.1 2 0 0 2 2 2 0 Photosystem II reaction centre X protein (PsbX) YrbL-PhoP_reg PF10707.9 NODE_77311_length_204_cov_1.852071_g69370_i0forward_frame_3 - 0.016 14.7 0.0 0.018 14.6 0.0 1.0 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL SID PF11778.8 NODE_77310_length_204_cov_1.857988_g69369_i0reverse_frame_2 - 0.079 13.1 0.2 0.089 12.9 0.2 1.0 1 0 0 1 1 1 0 Septation initiation Colipase PF01114.18 NODE_77310_length_204_cov_1.857988_g69369_i0forward_frame_2 - 0.033 13.9 1.2 0.033 13.9 1.2 1.6 2 0 0 2 2 2 0 Colipase, N-terminal domain HrpB4 PF09502.10 NODE_77309_length_204_cov_1.857988_g69368_i0forward_frame_2 - 0.024 14.5 0.1 0.027 14.3 0.1 1.0 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB4) Wbp11 PF09429.10 NODE_77308_length_204_cov_1.857988_g69367_i0reverse_frame_2 - 0.072 13.5 0.1 0.082 13.3 0.1 1.2 1 0 0 1 1 1 0 WW domain binding protein 11 DUF4733 PF15878.5 NODE_77303_length_204_cov_1.887574_g69362_i0forward_frame_2 - 6.1 7.4 6.1 2.1 8.9 2.9 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4733) zf-CHCC PF10276.9 NODE_77302_length_204_cov_1.893491_g69361_i0forward_frame_2 - 0.046 13.8 0.0 0.073 13.1 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger domain PI3K_C2 PF00792.24 NODE_77300_length_204_cov_1.893491_g69359_i0forward_frame_2 - 0.0088 16.0 0.1 0.0096 15.8 0.1 1.2 1 0 0 1 1 1 1 Phosphoinositide 3-kinase C2 Peptidase_S41_N PF11918.8 NODE_77297_length_204_cov_1.893491_g69356_i0forward_frame_2 - 0.001 19.3 0.2 0.0012 19.0 0.2 1.1 1 0 0 1 1 1 1 N-terminal domain of Peptidase_S41 in eukaryotic IRBP Herpes_pp85 PF04637.12 NODE_77297_length_204_cov_1.893491_g69356_i0forward_frame_2 - 0.038 12.4 0.0 0.038 12.4 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) FliD_N PF02465.18 NODE_77297_length_204_cov_1.893491_g69356_i0forward_frame_2 - 0.085 13.6 1.2 0.11 13.2 1.2 1.2 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus 7TM_GPCR_Sru PF10322.9 NODE_77296_length_204_cov_1.905325_g69355_i0forward_frame_3 - 0.0011 18.4 0.1 0.0011 18.3 0.1 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Sru CN_hydrolase PF00795.22 NODE_77296_length_204_cov_1.905325_g69355_i0forward_frame_2 - 7.6e-06 25.4 0.0 7.6e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Ank_3 PF13606.6 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 2.4e-13 49.0 1.2 3.8e-06 26.8 0.1 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 5e-13 48.8 1.6 1.6e-05 25.2 0.4 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 5.6e-10 39.7 0.8 2.2e-09 37.7 0.8 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 5.6e-07 30.0 0.9 0.003 18.1 0.1 2.1 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_77295_length_204_cov_1.911243_g69354_i0reverse_frame_3 - 6.3e-07 29.6 2.9 0.00092 19.5 1.4 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Rh5 PF18515.1 NODE_77289_length_204_cov_1.976331_g69348_i0reverse_frame_3 - 0.056 12.7 0.0 0.064 12.6 0.0 1.0 1 0 0 1 1 1 0 Rh5 coiled-coil domain DUF4633 PF15464.6 NODE_77288_length_204_cov_1.994083_g69347_i0reverse_frame_2 - 0.036 14.2 0.2 0.074 13.2 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4633) ChW PF07538.11 NODE_77286_length_204_cov_2.000000_g69345_i0forward_frame_3 - 0.18 11.7 0.2 0.18 11.7 0.2 1.8 2 0 0 2 2 2 0 Clostridial hydrophobic W PAXNEB PF05625.11 NODE_77283_length_204_cov_2.011834_g69342_i0forward_frame_2 - 0.096 11.8 0.1 0.11 11.7 0.1 1.0 1 0 0 1 1 1 0 PAXNEB protein HSR PF03172.13 NODE_77281_length_204_cov_2.023669_g69340_i0forward_frame_3 - 0.0069 16.5 0.2 0.0076 16.4 0.2 1.1 1 0 0 1 1 1 1 HSR domain PIP49_C PF12260.8 NODE_77280_length_204_cov_2.023669_g69339_i0forward_frame_3 - 0.066 12.8 0.1 0.068 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 DUF3829 PF12889.7 NODE_77278_length_204_cov_2.035503_g69337_i0reverse_frame_3 - 0.011 15.2 0.2 0.014 14.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3829) Gallidermin PF02052.15 NODE_77277_length_204_cov_2.041420_g69336_i0reverse_frame_2 - 7.9 6.9 6.5 2.5 8.5 1.3 2.2 2 0 0 2 2 2 0 Gallidermin DUF4439 PF14530.6 NODE_77275_length_204_cov_2.065089_g69334_i0forward_frame_2 - 0.016 15.9 0.5 0.019 15.7 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4439) PGA2 PF07543.12 NODE_77275_length_204_cov_2.065089_g69334_i0forward_frame_2 - 0.49 10.4 6.1 0.63 10.0 6.1 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 DNA_pol_phi PF04931.13 NODE_77275_length_204_cov_2.065089_g69334_i0forward_frame_2 - 2.4 6.2 7.2 2.8 5.9 7.2 1.0 1 0 0 1 1 1 0 DNA polymerase phi Phage_holin_3_7 PF05449.11 NODE_77272_length_204_cov_2.076923_g69331_i0forward_frame_3 - 0.11 12.5 0.5 0.16 12.0 0.5 1.3 1 0 0 1 1 1 0 Putative 3TM holin, Phage_holin_3 Glyco_hydro_31 PF01055.26 NODE_77270_length_204_cov_2.082840_g69329_i0reverse_frame_2 - 0.00053 19.3 0.1 0.00053 19.3 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 RseC_MucC PF04246.12 NODE_77269_length_204_cov_2.082840_g69328_i0reverse_frame_2 - 2.1 8.3 5.2 2.4 8.1 5.2 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC zf-XS PF03470.14 NODE_77267_length_204_cov_2.106509_g69326_i0forward_frame_3 - 0.09 13.1 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 XS zinc finger domain Chitin_synth_2 PF03142.15 NODE_77267_length_204_cov_2.106509_g69326_i0forward_frame_2 - 0.0013 17.4 0.1 0.0013 17.4 0.1 1.0 1 0 0 1 1 1 1 Chitin synthase Orthoreo_P17 PF07272.11 NODE_77261_length_204_cov_2.130178_g69320_i0reverse_frame_3 - 0.043 13.8 0.5 0.05 13.6 0.5 1.1 1 0 0 1 1 1 0 Orthoreovirus P17 protein Shisa PF13908.6 NODE_77260_length_204_cov_2.142012_g69319_i0reverse_frame_2 - 0.31 11.3 2.5 0.37 11.0 2.5 1.2 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator Kinesin PF00225.23 NODE_77259_length_204_cov_2.147929_g69318_i0reverse_frame_2 - 2.1e-26 92.6 0.1 2.3e-26 92.5 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Phage_integrase PF00589.22 NODE_77257_length_204_cov_2.159763_g69316_i0reverse_frame_3 - 0.0024 17.7 0.0 0.0026 17.6 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family HTH_25 PF13413.6 NODE_77253_length_204_cov_2.218935_g69312_i0reverse_frame_3 - 0.84 9.5 4.7 4.8 7.1 0.6 2.6 2 1 0 2 2 2 0 Helix-turn-helix domain Lip_A_acyltrans PF03279.13 NODE_77252_length_204_cov_2.236686_g69311_i0reverse_frame_2 - 0.078 12.1 0.0 0.089 11.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial lipid A biosynthesis acyltransferase KCNQ2_u3 PF16642.5 NODE_77249_length_204_cov_2.242604_g69308_i0forward_frame_2 - 5.8 8.0 7.3 7.6 7.6 1.8 2.0 1 1 1 2 2 2 0 Unstructured region on Potassium channel subunit alpha KvLQT2 TMIE PF16038.5 NODE_77243_length_204_cov_2.325444_g69302_i0reverse_frame_2 - 0.046 13.6 3.2 0.046 13.6 3.2 1.8 1 1 1 2 2 2 0 TMIE protein Chitin_synth_1 PF01644.17 NODE_77242_length_204_cov_2.331361_g69301_i0forward_frame_3 - 0.053 13.5 0.0 0.06 13.3 0.0 1.1 1 0 0 1 1 1 0 Chitin synthase Pox_L3_FP4 PF03339.14 NODE_77242_length_204_cov_2.331361_g69301_i0forward_frame_2 - 0.1 11.6 0.9 0.11 11.4 0.9 1.0 1 0 0 1 1 1 0 Poxvirus L3/FP4 protein Baculo_11_kDa PF06143.11 NODE_77239_length_204_cov_2.360947_g69298_i0reverse_frame_2 - 0.015 14.9 0.6 0.015 14.9 0.6 1.6 2 0 0 2 2 2 0 Baculovirus 11 kDa family DUF5107 PF17128.4 NODE_77237_length_204_cov_2.396450_g69296_i0reverse_frame_3 - 0.091 11.9 0.0 0.1 11.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5107) Molydop_binding PF01568.21 NODE_77235_length_204_cov_2.426036_g69294_i0reverse_frame_2 - 0.18 11.9 0.0 0.24 11.4 0.0 1.1 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain TMEM52 PF14979.6 NODE_77233_length_204_cov_2.497041_g69292_i0reverse_frame_3 - 4.2 7.3 7.0 4.2 7.3 7.0 1.0 1 0 0 1 1 1 0 Transmembrane 52 zf-Nse PF11789.8 NODE_77232_length_204_cov_2.538462_g69291_i0forward_frame_2 - 0.054 13.3 1.4 0.066 13.1 1.4 1.2 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Herpes_LMP1 PF05297.11 NODE_77230_length_204_cov_2.568047_g69289_i0forward_frame_2 - 1.8 7.7 6.6 1.9 7.6 6.6 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) RAI16-like PF10257.9 NODE_77219_length_204_cov_2.698225_g69278_i0forward_frame_2 - 8.8e-05 21.5 0.1 9.1e-05 21.5 0.1 1.0 1 0 0 1 1 1 1 Retinoic acid induced 16-like protein AFP PF02420.15 NODE_77217_length_204_cov_2.715976_g69276_i0reverse_frame_2 - 1.7 9.3 6.7 4.2 8.0 0.1 3.9 3 1 1 4 4 4 0 Insect antifreeze protein repeat DUF3587 PF12132.8 NODE_77217_length_204_cov_2.715976_g69276_i0forward_frame_2 - 0.014 14.8 5.5 0.018 14.5 5.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3587) Cnd1 PF12717.7 NODE_77216_length_204_cov_2.804734_g69275_i0reverse_frame_2 - 0.00018 21.6 0.1 0.00021 21.4 0.1 1.2 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 NODE_77216_length_204_cov_2.804734_g69275_i0reverse_frame_2 - 0.066 13.5 0.0 0.13 12.6 0.0 1.5 1 1 0 1 1 1 0 HEAT repeat Calc_CGRP_IAPP PF00214.19 NODE_77209_length_204_cov_2.899408_g69268_i0reverse_frame_3 - 0.0095 16.3 0.6 0.011 16.1 0.6 1.1 1 0 0 1 1 1 1 Calcitonin / CGRP / IAPP family Orf78 PF06024.12 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_3 - 0.0016 18.7 1.4 0.0018 18.6 1.4 1.1 1 0 0 1 1 1 1 Orf78 (ac78) TMEM154 PF15102.6 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_3 - 0.024 14.6 5.3 0.028 14.3 5.3 1.1 1 0 0 1 1 1 0 TMEM154 protein family Amnionless PF14828.6 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_3 - 0.13 11.0 3.8 0.13 11.0 3.8 1.0 1 0 0 1 1 1 0 Amnionless HemY_N PF07219.13 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.00018 21.7 5.8 0.00025 21.2 5.8 1.2 1 0 0 1 1 1 1 HemY protein N-terminus Trp_oprn_chp PF09534.10 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.0037 17.1 1.4 0.0044 16.8 1.4 1.1 1 0 0 1 1 1 1 Tryptophan-associated transmembrane protein (Trp_oprn_chp) 7TM_GPCR_Srx PF10328.9 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.0061 16.2 0.6 0.0066 16.1 0.6 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srx DUF4834 PF16118.5 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.0083 17.1 0.2 0.0098 16.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) DUF2749 PF10907.8 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.05 13.8 10.0 0.091 12.9 10.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2749) Shisa PF13908.6 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.12 12.6 3.9 0.14 12.4 3.9 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF5305 PF17231.2 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.14 11.5 0.6 0.18 11.2 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5305) LapA_dom PF06305.11 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 0.2 11.5 5.4 0.49 10.3 5.4 1.7 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF929 PF06053.11 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 1.1 8.5 5.1 1.3 8.3 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) Herpes_UL56 PF04534.12 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 2.2 7.7 9.3 2.7 7.4 9.3 1.0 1 0 0 1 1 1 0 Herpesvirus UL56 protein DUF1505 PF07403.11 NODE_77207_length_204_cov_2.988166_g69266_i0reverse_frame_2 - 2.3 8.4 5.8 5 7.3 5.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1505) AJAP1_PANP_C PF15298.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_3 - 0.033 14.4 7.2 0.033 14.4 7.2 1.1 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF688 PF05097.12 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_3 - 0.11 11.7 0.2 0.12 11.5 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF688) Glucos_trans_II PF14264.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.021 14.2 0.0 0.023 14.1 0.0 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII PAP2_3 PF14378.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.034 13.8 1.4 0.04 13.6 1.4 1.0 1 0 0 1 1 1 0 PAP2 superfamily BatD PF13584.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.041 12.7 0.0 0.042 12.6 0.0 1.0 1 0 0 1 1 1 0 Oxygen tolerance DUF4381 PF14316.6 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.067 13.4 0.6 0.075 13.3 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) SRTM1 PF15872.5 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 0.13 12.4 0.3 0.15 12.2 0.3 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 CcmD PF04995.14 NODE_77207_length_204_cov_2.988166_g69266_i0forward_frame_2 - 3 8.0 9.9 4 7.6 9.9 1.1 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Ank PF00023.30 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 3.4e-06 27.3 0.3 1.8e-05 24.9 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 8e-06 26.4 0.0 9e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 1.1e-05 25.5 0.1 2.4e-05 24.4 0.0 1.7 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 5.5e-05 23.6 0.1 0.00011 22.7 0.1 1.5 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 0.00011 22.4 0.1 0.00015 22.0 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Orn_Arg_deC_N PF02784.16 NODE_77206_length_204_cov_3.071006_g69265_i0reverse_frame_3 - 0.15 11.4 0.0 0.15 11.4 0.0 1.0 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MFS_1 PF07690.16 NODE_77205_length_204_cov_3.094675_g69264_i0reverse_frame_2 - 0.0016 17.4 0.2 0.0016 17.4 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily EIID-AGA PF03613.14 NODE_77203_length_204_cov_3.159763_g69262_i0reverse_frame_2 - 0.034 13.3 1.2 0.039 13.1 1.2 1.1 1 0 0 1 1 1 0 PTS system mannose/fructose/sorbose family IID component Stevor PF17410.2 NODE_77203_length_204_cov_3.159763_g69262_i0reverse_frame_2 - 0.094 12.2 0.0 0.094 12.2 0.0 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF2865 PF11064.8 NODE_77202_length_204_cov_3.171598_g69261_i0forward_frame_2 - 0.18 12.2 0.5 0.26 11.7 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2865) Arm-DNA-bind_1 PF09003.10 NODE_77201_length_204_cov_3.355030_g69260_i0forward_frame_3 - 0.013 15.6 0.8 0.017 15.2 0.8 1.2 1 0 0 1 1 1 0 Bacteriophage lambda integrase, Arm DNA-binding domain Caveolin PF01146.17 NODE_77201_length_204_cov_3.355030_g69260_i0forward_frame_2 - 0.11 12.4 0.7 0.12 12.3 0.7 1.1 1 0 0 1 1 1 0 Caveolin ABC_membrane_3 PF13748.6 NODE_77198_length_204_cov_3.751479_g69257_i0reverse_frame_3 - 0.063 12.5 0.3 0.07 12.4 0.3 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region DUF2149 PF09919.9 NODE_77197_length_204_cov_4.100592_g69256_i0reverse_frame_3 - 0.017 15.4 0.2 0.018 15.3 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) SIT PF15330.6 NODE_77197_length_204_cov_4.100592_g69256_i0reverse_frame_3 - 0.02 15.3 0.1 0.022 15.2 0.1 1.1 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT MAP17 PF15807.5 NODE_77197_length_204_cov_4.100592_g69256_i0reverse_frame_3 - 0.068 13.4 0.1 0.073 13.3 0.1 1.0 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 ATP-synt_B PF00430.18 NODE_77197_length_204_cov_4.100592_g69256_i0reverse_frame_3 - 0.088 12.9 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) UL20 PF17582.2 NODE_77197_length_204_cov_4.100592_g69256_i0reverse_frame_3 - 0.098 11.9 0.4 0.12 11.7 0.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 PAC4 PF16093.5 NODE_77196_length_204_cov_4.183432_g69255_i0reverse_frame_2 - 0.067 13.4 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 SHR3_chaperone PF08229.11 NODE_77196_length_204_cov_4.183432_g69255_i0forward_frame_3 - 0.035 13.1 0.1 0.039 12.9 0.1 1.0 1 0 0 1 1 1 0 ER membrane protein SH3 LRR_9 PF14580.6 NODE_77195_length_204_cov_4.769231_g69254_i0forward_frame_3 - 0.0064 16.0 0.0 0.0065 16.0 0.0 1.0 1 0 0 1 1 1 1 Leucine-rich repeat Zwint PF15556.6 NODE_77189_length_204_cov_13.313609_g69248_i0forward_frame_3 - 0.12 11.9 0.6 0.14 11.6 0.6 1.0 1 0 0 1 1 1 0 ZW10 interactor Nha1_C PF08619.10 NODE_77181_length_204_cov_32.928994_g69240_i0forward_frame_3 - 0.32 10.1 5.3 0.32 10.1 5.3 1.0 1 0 0 1 1 1 0 Alkali metal cation/H+ antiporter Nha1 C terminus YabA PF06156.13 NODE_77181_length_204_cov_32.928994_g69240_i0forward_frame_2 - 0.07 13.8 1.0 0.097 13.3 1.0 1.3 1 0 0 1 1 1 0 Initiation control protein YabA FliL PF03748.14 NODE_77181_length_204_cov_32.928994_g69240_i0forward_frame_2 - 0.13 12.8 2.7 0.19 12.3 2.7 1.4 1 1 0 1 1 1 0 Flagellar basal body-associated protein FliL Apelin PF15360.6 NODE_77176_length_204_cov_38.656805_g69235_i0reverse_frame_2 - 0.13 12.9 3.9 4.7 7.8 1.4 2.1 2 0 0 2 2 2 0 APJ endogenous ligand DUF1582 PF07621.11 NODE_77172_length_204_cov_41.088757_g69231_i0reverse_frame_2 - 0.004 17.0 1.3 0.032 14.2 0.5 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1582) CRF-BP PF05428.11 NODE_77168_length_204_cov_45.420118_g69227_i0forward_frame_2 - 0.094 11.5 0.3 0.1 11.4 0.3 1.0 1 0 0 1 1 1 0 Corticotropin-releasing factor binding protein (CRF-BP) GTP_cyclohydro2 PF00925.20 NODE_77167_length_204_cov_46.284024_g69226_i0reverse_frame_2 - 0.12 12.0 0.1 0.13 11.9 0.1 1.0 1 0 0 1 1 1 0 GTP cyclohydrolase II Defensin_beta PF00711.19 NODE_77166_length_204_cov_46.686391_g69225_i0forward_frame_3 - 0.02 14.9 7.7 0.02 14.9 7.7 2.4 2 1 0 2 2 2 0 Beta defensin Claudin_3 PF06653.11 NODE_77164_length_204_cov_47.153846_g69223_i0forward_frame_3 - 0.14 12.1 8.5 0.15 12.0 8.5 1.0 1 0 0 1 1 1 0 Tight junction protein, Claudin-like RAMP4 PF06624.12 NODE_77164_length_204_cov_47.153846_g69223_i0forward_frame_3 - 7.3 6.7 6.2 3.6 7.7 3.8 1.8 2 0 0 2 2 2 0 Ribosome associated membrane protein RAMP4 DUF4813 PF16072.5 NODE_77162_length_204_cov_49.627219_g69221_i0reverse_frame_2 - 0.0018 18.0 3.3 0.0022 17.7 3.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4813) DUF169 PF02596.15 NODE_77161_length_204_cov_51.508876_g69220_i0forward_frame_3 - 0.025 14.5 0.1 0.027 14.4 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised ArCR, COG2043 ALG3 PF05208.13 NODE_77160_length_204_cov_52.550296_g69219_i0reverse_frame_3 - 0.36 10.2 4.8 0.39 10.1 4.8 1.1 1 0 0 1 1 1 0 ALG3 protein Crystall PF00030.19 NODE_77159_length_204_cov_53.798817_g69218_i0reverse_frame_2 - 0.14 12.4 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Beta/Gamma crystallin DUF2748 PF10871.8 NODE_77157_length_204_cov_53.982249_g69216_i0reverse_frame_3 - 0.19 10.3 0.0 0.21 10.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2748) tRNA_lig_kinase PF08303.11 NODE_77154_length_204_cov_58.343195_g69213_i0forward_frame_3 - 0.033 14.3 0.1 0.033 14.3 0.1 1.1 1 0 0 1 1 1 0 tRNA ligase kinase domain zf-C2H2 PF00096.26 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 2.2e-06 27.8 1.4 3e-06 27.4 1.4 1.2 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.00048 20.7 0.8 0.00068 20.3 0.8 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-met PF12874.7 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0013 19.1 0.9 0.0024 18.2 0.9 1.4 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0022 18.3 3.0 0.0031 17.7 3.0 1.3 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-LYAR PF08790.11 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0061 16.4 0.3 0.0093 15.9 0.3 1.3 1 0 0 1 1 1 1 LYAR-type C2HC zinc finger DUF629 PF04780.12 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0067 15.0 0.2 0.0072 14.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF629) zf-C2H2_2 PF12756.7 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0069 16.7 0.2 0.0077 16.5 0.2 1.1 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) Actin_micro PF17003.5 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.0073 15.5 0.3 0.0074 15.5 0.3 1.0 1 0 0 1 1 1 1 Putative actin-like family FOXP-CC PF16159.5 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.052 14.2 0.1 0.064 13.9 0.1 1.1 1 0 0 1 1 1 0 FOXP coiled-coil domain Zn-ribbon_8 PF09723.10 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.053 13.6 0.2 0.088 12.9 0.2 1.4 1 0 0 1 1 1 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.1 12.6 0.7 0.14 12.2 0.7 1.3 1 0 0 1 1 1 0 C2H2-type zinc finger zf-H2C2_2 PF13465.6 NODE_77153_length_204_cov_61.840237_g69212_i0forward_frame_3 - 0.15 12.6 3.2 0.23 12.0 0.5 2.0 2 0 0 2 2 2 0 Zinc-finger double domain PID PF00640.23 NODE_77152_length_204_cov_62.633136_g69211_i0forward_frame_2 - 0.051 13.6 0.1 0.085 12.9 0.1 1.3 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) Rhodanese_C PF12368.8 NODE_77147_length_204_cov_68.668639_g69206_i0forward_frame_3 - 0.0075 16.6 0.6 0.0086 16.4 0.6 1.1 1 0 0 1 1 1 1 Rhodanase C-terminal Shisa PF13908.6 NODE_77146_length_204_cov_68.792899_g69205_i0reverse_frame_3 - 0.0064 16.8 0.1 0.0064 16.8 0.1 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator ETRAMP PF09716.10 NODE_77146_length_204_cov_68.792899_g69205_i0reverse_frame_3 - 0.045 13.8 4.4 0.076 13.1 4.4 1.4 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF3375 PF11855.8 NODE_77146_length_204_cov_68.792899_g69205_i0forward_frame_3 - 0.009 15.0 0.4 0.01 14.8 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3375) TB2_DP1_HVA22 PF03134.19 NODE_77146_length_204_cov_68.792899_g69205_i0forward_frame_2 - 0.1 12.5 9.5 0.12 12.4 9.5 1.1 1 0 0 1 1 1 0 TB2/DP1, HVA22 family DUF4896 PF16237.5 NODE_77145_length_204_cov_69.349112_g69204_i0reverse_frame_2 - 0.8 9.6 10.5 0.47 10.4 7.8 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4896) OGFr_III PF04680.13 NODE_77141_length_204_cov_74.804734_g69200_i0forward_frame_3 - 0.76 10.5 3.1 2.8 8.7 3.1 1.9 1 1 0 1 1 1 0 Opioid growth factor receptor repeat ESPR PF13018.6 NODE_77134_length_204_cov_87.899408_g69193_i0reverse_frame_2 - 0.16 11.8 0.4 0.29 11.0 0.4 1.4 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system DUF4508 PF14969.6 NODE_77134_length_204_cov_87.899408_g69193_i0forward_frame_3 - 0.027 14.7 0.2 0.028 14.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4508) BORCS8 PF10167.9 NODE_77134_length_204_cov_87.899408_g69193_i0forward_frame_3 - 0.092 12.7 0.0 0.097 12.6 0.0 1.0 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 8 RseC_MucC PF04246.12 NODE_77131_length_204_cov_100.668639_g69190_i0forward_frame_3 - 1.1 9.2 4.2 1.4 8.9 4.2 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC 2OG-FeII_Oxy_3 PF13640.6 NODE_77130_length_204_cov_103.952663_g69189_i0forward_frame_3 - 0.00037 21.3 0.0 0.00043 21.1 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 NODE_77130_length_204_cov_103.952663_g69189_i0forward_frame_3 - 0.032 14.6 0.0 0.037 14.4 0.0 1.2 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase GP88 PF17338.2 NODE_77129_length_204_cov_122.692308_g69188_i0reverse_frame_3 - 0.087 12.3 0.2 0.089 12.2 0.2 1.1 1 0 0 1 1 1 0 Gene product 88 RNHCP PF12647.7 NODE_77129_length_204_cov_122.692308_g69188_i0forward_frame_3 - 0.0054 16.7 0.1 0.0064 16.4 0.1 1.2 1 0 0 1 1 1 1 RNHCP domain LANC_like PF05147.13 NODE_77129_length_204_cov_122.692308_g69188_i0forward_frame_3 - 0.0087 14.7 0.0 0.0091 14.6 0.0 1.0 1 0 0 1 1 1 1 Lanthionine synthetase C-like protein Vitelline_membr PF10542.9 NODE_77129_length_204_cov_122.692308_g69188_i0forward_frame_3 - 0.079 12.8 0.3 0.12 12.3 0.3 1.4 1 0 0 1 1 1 0 Vitelline membrane cysteine-rich region Fringe PF02434.16 NODE_77129_length_204_cov_122.692308_g69188_i0forward_frame_3 - 0.13 11.6 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 Fringe-like DUF5472 PF17566.2 NODE_77123_length_204_cov_165.266272_g69182_i0forward_frame_3 - 0.62 10.1 2.3 0.95 9.5 2.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5472) Lamprin PF06403.11 NODE_77120_length_204_cov_263.189349_g69179_i0forward_frame_2 - 0.15 12.0 17.8 0.065 13.2 7.7 2.1 1 1 1 2 2 2 0 Lamprin Gaa1 PF04114.14 NODE_77119_length_204_cov_272.715976_g69178_i0reverse_frame_3 - 0.55 9.2 5.0 0.59 9.1 5.0 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component DUF4769 PF15992.5 NODE_77115_length_204_cov_798.988166_g69174_i0reverse_frame_3 - 0.33 10.7 3.0 0.35 10.6 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) DUF5543 PF17697.1 NODE_77112_length_204_cov_14636.011834_g69171_i0forward_frame_3 - 0.028 14.7 0.0 0.033 14.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5543) DFF40 PF09230.10 NODE_77111_length_204_cov_91292.556213_g69170_i0reverse_frame_3 - 0.00021 21.0 0.2 0.00024 20.8 0.2 1.0 1 0 0 1 1 1 1 DNA fragmentation factor 40 kDa Nicastrin PF05450.15 ORF99398 - 0.12 11.8 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Nicastrin DUF443 PF04276.12 ORF99197 - 0.021 14.6 3.8 0.02 14.7 3.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF443) DUF436 PF04260.12 ORF97596 - 0.019 14.5 0.0 0.019 14.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF436) BT1 PF03092.16 ORF97544 - 0.046 12.0 1.8 0.047 11.9 1.8 1.0 1 0 0 1 1 1 0 BT1 family Connexin PF00029.19 ORF97455 - 0.12 12.2 5.1 0.13 12.0 5.1 1.1 1 0 0 1 1 1 0 Connexin UPF0203 PF05254.12 ORF96414 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) zf-LITAF-like PF10601.9 ORF95985 - 0.0057 16.9 9.7 0.0061 16.8 9.7 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain UPF0203 PF05254.12 ORF95504 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF3405 PF11885.8 ORF94490 - 3.7 6.0 7.6 4.6 5.7 7.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) Orthoreo_P17 PF07272.11 ORF94071 - 0.097 12.7 0.1 0.11 12.5 0.1 1.0 1 0 0 1 1 1 0 Orthoreovirus P17 protein Diphthamide_syn PF01866.17 ORF93517 - 0.049 13.1 0.6 0.046 13.2 0.6 1.2 1 0 0 1 1 1 0 Putative diphthamide synthesis protein DUF4489 PF14879.6 ORF93468 - 0.052 13.7 0.2 0.054 13.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4489) LPAM_2 PF13627.6 ORF93390 - 5.7e-09 35.6 4.4 7.2e-09 35.3 4.4 1.2 1 0 0 1 1 1 1 Prokaryotic lipoprotein-attachment site TEX33 PF15400.6 ORF92839 - 0.012 16.1 0.1 0.013 16.0 0.1 1.0 1 0 0 1 1 1 0 Testis-expressed sequence 33 protein family UPF0203 PF05254.12 ORF92664 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) RPAP2_Rtr1 PF04181.13 ORF92529 - 0.082 13.2 1.8 0.096 13.0 1.8 1.1 1 0 0 1 1 1 0 Rtr1/RPAP2 family MlaC PF05494.12 ORF92411 - 0.041 13.6 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 MlaC protein DASH_Dam1 PF08653.10 ORF92233 - 0.00075 19.2 0.0 0.00096 18.9 0.0 1.2 1 0 0 1 1 1 1 DASH complex subunit Dam1 DUF3894 PF13033.6 ORF92233 - 0.035 14.2 1.6 0.12 12.5 1.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3894) Cas_GSU0054 PF09609.10 ORF91977 - 0.16 10.6 0.1 0.19 10.4 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein, GSU0054 family (Cas_GSU0054) Flavi_NS1 PF00948.21 ORF91676 - 0.028 13.3 1.4 0.03 13.2 1.4 1.0 1 0 0 1 1 1 0 Flavivirus non-structural Protein NS1 Takusan PF04822.13 ORF91463 - 0.0047 16.8 0.9 0.0055 16.6 0.9 1.1 1 0 0 1 1 1 1 Takusan Cytochrom_B562 PF07361.11 ORF91463 - 0.041 14.6 0.1 0.047 14.4 0.1 1.0 1 0 0 1 1 1 0 Cytochrome b562 DUF1160 PF06648.11 ORF91222 - 0.03 14.3 0.3 0.03 14.3 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) Diphthamide_syn PF01866.17 ORF9096 - 0.049 13.1 0.6 0.046 13.2 0.6 1.2 1 0 0 1 1 1 0 Putative diphthamide synthesis protein ShK PF01549.24 ORF90538 - 0.1 13.2 8.7 0.18 12.3 7.7 2.0 1 1 0 1 1 1 0 ShK domain-like Toxin_11 PF07473.11 ORF90538 - 0.84 9.8 0.2 0.84 9.8 0.2 2.5 2 1 0 2 2 2 0 Spasmodic peptide gm9a; conotoxin from Conus species UPF0253 PF06786.12 ORF90182 - 0.047 14.0 0.0 0.069 13.4 0.0 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0253) UPF0203 PF05254.12 ORF90141 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF2083 PF09856.9 ORF90035 - 0.037 13.9 0.4 0.17 11.7 0.1 1.7 1 1 1 2 2 2 0 Predicted transcriptional regulator (DUF2083) TMEM191C PF15194.6 ORF89887 - 0.045 13.9 0.9 0.052 13.7 0.9 1.1 1 0 0 1 1 1 0 TMEM191C family DUF485 PF04341.12 ORF89887 - 0.049 13.6 0.5 0.053 13.5 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 ShK PF01549.24 ORF89547 - 0.52 10.9 5.8 1.4 9.5 1.5 2.4 2 1 0 2 2 2 0 ShK domain-like TMEM132D_C PF15706.5 ORF89415 - 0.00042 20.0 0.2 0.00051 19.8 0.2 1.2 1 0 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Cyclin_C PF02984.19 ORF89415 - 0.0067 16.5 0.2 0.0067 16.5 0.2 1.1 1 0 0 1 1 1 1 Cyclin, C-terminal domain Trans_reg_C PF00486.28 ORF89371 - 4.5e-13 49.1 0.1 4.9e-13 49.0 0.1 1.0 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal DUF2663 PF10864.8 ORF89306 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF3418 PF11898.8 ORF89252 - 3.5e-22 78.8 0.4 3.8e-22 78.7 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3418) DUF3734 PF12536.8 ORF89252 - 0.065 13.6 0.0 0.082 13.2 0.0 1.2 1 0 0 1 1 1 0 Patatin phospholipase zf-C3HC4_5 PF17121.5 ORF88615 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) AsmA PF05170.14 ORF88210 - 3.3 6.4 4.0 3.5 6.3 4.0 1.0 1 0 0 1 1 1 0 AsmA family Toxin_5 PF05294.13 ORF87987 - 0.0062 16.9 2.7 0.008 16.6 2.7 1.3 1 0 0 1 1 1 1 Scorpion short toxin SspB PF04386.13 ORF87932 - 0.054 13.4 0.0 0.062 13.2 0.0 1.0 1 0 0 1 1 1 0 Stringent starvation protein B Peptidase_M3 PF01432.20 ORF87899 - 0.11 11.8 2.9 0.1 11.8 2.9 1.0 1 0 0 1 1 1 0 Peptidase family M3 GCR PF02155.15 ORF8752 - 0.097 11.7 1.1 0.11 11.5 1.1 1.0 1 0 0 1 1 1 0 Glucocorticoid receptor DUF5363 PF17320.2 ORF87255 - 0.16 11.8 3.5 0.3 11.0 1.2 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5363) IBB PF01749.20 ORF85998 - 0.005 17.2 0.3 0.006 17.0 0.3 1.3 1 0 0 1 1 1 1 Importin beta binding domain RAI1 PF08652.11 ORF84815 - 0.0032 17.6 0.2 0.0047 17.1 0.2 1.2 1 0 0 1 1 1 1 RAI1 like PD-(D/E)XK nuclease PAP2 PF01569.21 ORF8479 - 1e-06 28.5 1.1 1.3e-06 28.2 1.1 1.1 1 0 0 1 1 1 1 PAP2 superfamily LD_cluster2 PF18163.1 ORF8479 - 0.22 11.0 0.1 0.26 10.8 0.1 1.1 1 0 0 1 1 1 0 SLOG cluster2 THF_DHG_CYH PF00763.23 ORF84272 - 9.4e-07 29.1 0.0 1.1e-06 28.9 0.0 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Cdc6_C PF09079.11 ORF83604 - 0.025 14.5 0.7 0.029 14.4 0.7 1.2 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain ADAM_CR_2 PF17771.1 ORF83604 - 0.49 11.0 8.9 0.59 10.7 8.9 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich domain 7TM_GPCR_Srd PF10317.9 ORF83059 - 0.02 14.1 0.1 0.022 13.9 0.1 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd DUF1582 PF07621.11 ORF83043 - 0.14 12.1 0.1 0.14 12.1 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1582) DUF308 PF03729.13 ORF8253 - 0.0055 17.0 8.4 0.03 14.7 0.9 2.1 1 1 1 2 2 2 2 Short repeat of unknown function (DUF308) SPW PF03779.14 ORF8253 - 0.13 11.9 7.1 0.16 11.6 7.1 1.1 1 0 0 1 1 1 0 SPW repeat TPPK_C PF12555.8 ORF8253 - 1.1 9.4 6.8 1.6 8.8 0.2 2.2 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal NOD PF06816.13 ORF82354 - 0.085 12.5 0.2 0.13 11.9 0.2 1.3 1 0 0 1 1 1 0 NOTCH protein Viral_coat PF00729.18 ORF82180 - 0.14 11.9 0.1 0.16 11.7 0.1 1.0 1 0 0 1 1 1 0 Viral coat protein (S domain) PKD_3 PF16820.5 ORF81890 - 0.16 11.7 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 PKD-like domain CTP_transf_like PF01467.26 ORF81406 - 9.3e-05 22.6 0.1 0.0002 21.5 0.0 1.6 2 0 0 2 2 2 1 Cytidylyltransferase-like Ery_res_leader2 PF08057.11 ORF8122 - 0.11 12.9 0.7 0.4 11.2 0.2 2.2 2 0 0 2 2 2 0 Erythromycin resistance leader peptide DUF5435 PF17503.2 ORF80710 - 0.29 10.9 1.1 0.34 10.6 1.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5435) DUF2207 PF09972.9 ORF80710 - 5.6 5.6 6.1 5.8 5.6 6.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Phytoreo_Pns PF05451.11 ORF80027 - 0.088 11.9 0.8 0.089 11.9 0.8 1.0 1 0 0 1 1 1 0 Phytoreovirus nonstructural protein Pns10/11 Post_transc_reg PF13797.6 ORF79766 - 0.039 13.8 0.2 0.055 13.3 0.2 1.3 1 0 0 1 1 1 0 Post-transcriptional regulator DUF4577 PF15145.6 ORF79395 - 0.15 12.1 3.8 0.16 12.0 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Shisa PF13908.6 ORF79395 - 1.9 8.7 3.7 2.2 8.5 3.7 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF2733 PF10813.8 ORF78502 - 9.8 6.0 7.3 7.4 6.4 4.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) TMEM191C PF15194.6 ORF78133 - 0.045 13.9 0.9 0.052 13.7 0.9 1.1 1 0 0 1 1 1 0 TMEM191C family DUF485 PF04341.12 ORF78133 - 0.049 13.6 0.5 0.053 13.5 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF485 LRR_6 PF13516.6 ORF78055 - 0.0025 17.7 1.1 0.48 10.6 0.1 2.6 2 0 0 2 2 2 2 Leucine Rich repeat Diphthamide_syn PF01866.17 ORF78030 - 0.049 13.1 0.6 0.046 13.2 0.6 1.2 1 0 0 1 1 1 0 Putative diphthamide synthesis protein Toxin_28 PF08115.11 ORF77738 - 0.11 12.4 1.5 0.15 12.0 1.5 1.1 1 0 0 1 1 1 0 SFI toxin family TipE PF16972.5 ORF77738 - 1.7 7.8 5.0 1.8 7.7 5.0 1.1 1 0 0 1 1 1 0 Na+ channel auxiliary subunit TipE DUF667 PF05018.13 ORF76353 - 5.1e-25 88.3 0.1 5.5e-25 88.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) zf-C3HC4_5 PF17121.5 ORF76048 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RNA_pol_Rpb4 PF03874.16 ORF75862 - 0.043 14.2 1.4 0.052 13.9 1.4 1.2 1 1 0 1 1 1 0 RNA polymerase Rpb4 CDC24 PF06395.11 ORF7584 - 0.062 13.6 0.3 0.07 13.4 0.3 1.1 1 0 0 1 1 1 0 CDC24 Calponin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks407.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks407.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks407.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks407.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:38:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5527 PF17665.1 ORF75332 - 0.0091 15.5 0.1 0.0098 15.4 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) SspB PF04386.13 ORF75332 - 0.073 13.0 0.0 0.075 12.9 0.0 1.0 1 0 0 1 1 1 0 Stringent starvation protein B HTH_Tnp_IS1 PF12759.7 ORF75097 - 0.026 14.1 0.0 0.041 13.5 0.0 1.4 1 0 0 1 1 1 0 InsA C-terminal domain Peptidase_M9_N PF08453.10 ORF74462 - 0.071 12.8 0.0 0.075 12.7 0.0 1.0 1 0 0 1 1 1 0 Peptidase family M9 N-terminal Fibrillin_U_N PF18193.1 ORF74267 - 0.0079 16.3 0.1 0.016 15.3 0.1 1.5 1 0 0 1 1 1 1 Fibrillin 1 unique N-terminal domain Rep_fac-A_C PF08646.10 ORF7372 - 0.025 14.3 0.2 0.028 14.2 0.2 1.0 1 0 0 1 1 1 0 Replication factor-A C terminal domain UPF0203 PF05254.12 ORF73619 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DIRP PF06584.13 ORF73112 - 0.0038 17.4 1.2 0.0038 17.4 1.2 1.0 1 0 0 1 1 1 1 DIRP Peptidase_M17 PF00883.21 ORF72576 - 1.9e-14 53.7 0.0 2e-14 53.6 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Suppressor_P21 PF11479.8 ORF7234 - 0.055 13.7 0.2 0.069 13.3 0.2 1.2 1 0 0 1 1 1 0 RNA silencing suppressor P21 C-terminal domain DUF3742 PF12553.8 ORF72281 - 0.11 12.6 2.3 0.52 10.4 0.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3742) DUF674 PF05056.12 ORF70353 - 2 7.2 5.4 2 7.2 5.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF674) DUF3842 PF12953.7 ORF69908 - 0.0058 17.0 0.0 0.0063 16.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3842) DUF3845 PF12956.7 ORF68881 - 0.049 13.1 0.2 0.055 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure DsbD PF02683.15 ORF68827 - 0.07 13.0 0.2 0.081 12.8 0.2 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region DUF2663 PF10864.8 ORF68624 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) HTH_AraC PF00165.23 ORF6793 - 0.035 14.2 0.4 0.062 13.4 0.1 1.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family DUF3674 PF12426.8 ORF67722 - 0.043 13.8 0.2 0.066 13.3 0.2 1.4 1 0 0 1 1 1 0 RNA dependent RNA polymerase Aa_trans PF01490.18 ORF67555 - 0.019 13.7 1.9 0.02 13.6 1.9 1.1 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein DUF2868 PF11067.8 ORF67555 - 0.12 11.8 0.1 0.13 11.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) Pkinase PF00069.25 ORF67251 - 2.3e-09 37.0 0.0 2.5e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain DUF4880 PF16220.5 ORF66587 - 0.15 11.9 2.6 9.2 6.2 0.4 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4880) DUF2610 PF11020.8 ORF66587 - 5.1 7.0 8.5 22 5.0 1.0 2.8 1 1 2 3 3 3 0 Domain of unknown function (DUF2610) BpuSI_N PF15516.6 ORF66503 - 0.081 12.8 0.0 0.097 12.6 0.0 1.1 1 0 0 1 1 1 0 BpuSI N-terminal domain FIIND PF13553.6 ORF65542 - 0.0059 16.0 0.3 0.0059 16.0 0.3 1.0 1 0 0 1 1 1 1 Function to find Diphthamide_syn PF01866.17 ORF65432 - 0.049 13.1 0.6 0.046 13.2 0.6 1.2 1 0 0 1 1 1 0 Putative diphthamide synthesis protein Stevor PF17410.2 ORF65135 - 1.6 8.2 2.7 1.6 8.2 2.7 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF4147 PF13660.6 ORF65001 - 0.17 11.4 0.4 0.18 11.3 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4147) GP70 PF17429.2 ORF6471 - 0.00074 19.3 0.1 0.0021 17.9 0.1 1.8 1 1 1 2 2 2 1 Gene product 70 RIX1 PF08167.12 ORF64448 - 0.03 14.1 0.1 0.032 14.0 0.1 1.0 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis Ntox43 PF15537.6 ORF64394 - 0.036 14.1 0.0 0.039 14.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial toxin 43 HTH_AraC PF00165.23 ORF63726 - 0.035 14.2 0.4 0.062 13.4 0.1 1.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family ACT_5 PF13710.6 ORF6357 - 0.57 10.1 3.7 9.3 6.2 3.7 2.1 1 1 0 1 1 1 0 ACT domain zf-H2C2_5 PF13909.6 ORF63019 - 0.056 13.2 0.3 0.12 12.2 0.3 1.6 1 0 0 1 1 1 0 C2H2-type zinc-finger domain ABM PF03992.16 ORF63019 - 0.2 11.8 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 Antibiotic biosynthesis monooxygenase RXT2_N PF08595.11 ORF62800 - 0.18 11.8 0.0 0.2 11.7 0.0 1.0 1 0 0 1 1 1 0 RXT2-like, N-terminal zf-Tim10_DDP PF02953.15 ORF62597 - 0.22 11.2 4.6 1.4 8.6 0.3 2.1 2 0 0 2 2 2 0 Tim10/DDP family zinc finger EPF PF17181.4 ORF6238 - 0.045 13.7 2.7 0.077 13.0 2.7 1.6 1 1 0 1 1 1 0 Epidermal patterning factor proteins NusG_II PF07009.11 ORF61460 - 0.022 15.0 0.1 0.023 14.9 0.1 1.1 1 0 0 1 1 1 0 NusG domain II Aa_trans PF01490.18 ORF61379 - 2e-05 23.5 5.2 2e-05 23.5 5.2 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein MARVEL PF01284.23 ORF61379 - 0.03 14.4 4.2 0.036 14.1 4.2 1.2 1 1 0 1 1 1 0 Membrane-associating domain CNOT11 PF10155.9 ORF61300 - 0.092 12.9 0.2 0.11 12.6 0.2 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 DUF5527 PF17665.1 ORF61017 - 0.0091 15.5 0.1 0.0098 15.4 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) SspB PF04386.13 ORF61017 - 0.073 13.0 0.0 0.075 12.9 0.0 1.0 1 0 0 1 1 1 0 Stringent starvation protein B DUF1748 PF08520.10 ORF60450 - 0.049 13.5 0.1 0.059 13.3 0.1 1.1 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1748) UPF0203 PF05254.12 ORF59251 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) Rieske PF00355.26 ORF59218 - 0.57 10.2 3.4 0.63 10.0 3.4 1.1 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain DUF2663 PF10864.8 ORF58791 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) CNOT11 PF10155.9 ORF57515 - 0.092 12.9 0.2 0.11 12.6 0.2 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 RRS1 PF04939.12 ORF57269 - 0.2 11.5 0.0 0.23 11.3 0.0 1.0 1 0 0 1 1 1 0 Ribosome biogenesis regulatory protein (RRS1) Defensin_1 PF00323.19 ORF56826 - 0.14 12.7 1.3 0.14 12.7 1.3 1.9 2 0 0 2 2 2 0 Mammalian defensin Acetyltransf_18 PF18014.1 ORF56670 - 0.029 14.2 0.1 0.033 14.0 0.1 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Renin_r PF07850.14 ORF55785 - 1.3 9.6 7.0 1.6 9.4 7.0 1.1 1 0 0 1 1 1 0 Renin receptor-like protein SopD PF11047.8 ORF5535 - 0.054 12.7 0.0 0.064 12.4 0.0 1.0 1 0 0 1 1 1 0 Salmonella outer protein D Pro_isomerase PF00160.21 ORF53977 - 0.14 12.4 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIIND PF13553.6 ORF53969 - 0.0059 16.0 0.3 0.0059 16.0 0.3 1.0 1 0 0 1 1 1 1 Function to find GatB_N PF02934.15 ORF53774 - 0.011 15.2 0.2 0.012 15.0 0.2 1.0 1 0 0 1 1 1 0 GatB/GatE catalytic domain Pkinase PF00069.25 ORF53764 - 2e-08 33.9 0.5 2.3e-08 33.7 0.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF53764 - 0.00014 21.2 0.3 0.00016 21.0 0.3 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase N1221 PF07923.13 ORF52664 - 0.22 10.7 0.0 0.24 10.6 0.0 1.0 1 0 0 1 1 1 0 N1221-like protein Rnf-Nqr PF02508.14 ORF52202 - 0.031 14.3 5.3 0.032 14.2 5.3 1.0 1 0 0 1 1 1 0 Rnf-Nqr subunit, membrane protein DUF1700 PF08006.11 ORF52202 - 0.07 12.7 3.6 0.081 12.5 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Vpu PF00558.19 ORF52202 - 9.7 6.0 9.4 6.8 6.5 1.2 2.0 1 1 1 2 2 2 0 Vpu protein LST1 PF05083.13 ORF52030 - 0.58 10.5 5.4 0.11 12.8 1.9 1.6 1 1 1 2 2 2 0 LST-1 protein Plus-3 PF03126.18 ORF51925 - 0.022 15.3 0.1 0.026 15.0 0.1 1.1 1 0 0 1 1 1 0 Plus-3 domain OppC_N PF12911.7 ORF51702 - 0.049 13.6 0.0 0.25 11.4 0.0 1.9 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C DNAPolymera_Pol PF11590.8 ORF51530 - 0.089 12.7 0.1 0.17 11.8 0.0 1.6 2 0 0 2 2 2 0 DNA polymerase catalytic subunit Pol RepA1_leader PF08048.12 ORF50969 - 0.011 16.0 0.6 0.02 15.2 0.6 1.4 1 0 0 1 1 1 0 Tap RepA1 leader peptide DUF3318 PF11780.8 ORF50969 - 0.19 11.7 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3318) DUF1505 PF07403.11 ORF50917 - 0.0082 16.3 0.1 0.0082 16.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1505) MlaC PF05494.12 ORF50687 - 0.041 13.6 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 MlaC protein LRR_6 PF13516.6 ORF50684 - 1.5e-05 24.6 0.0 0.0027 17.6 0.0 2.2 2 0 0 2 2 2 2 Leucine Rich repeat UPF0203 PF05254.12 ORF50273 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) UPF0203 PF05254.12 ORF50249 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) Myotoxins PF00819.17 ORF49791 - 0.49 10.7 3.6 5.2 7.4 0.4 2.4 2 1 0 2 2 2 0 Myotoxin, crotamine TetR PF13972.6 ORF49212 - 0.074 12.8 0.6 0.1 12.3 0.6 1.3 1 0 0 1 1 1 0 Bacterial transcriptional repressor TMEM213 PF15192.6 ORF49022 - 0.065 13.2 4.4 0.092 12.7 4.4 1.2 1 0 0 1 1 1 0 TMEM213 family Sec61_beta PF03911.16 ORF488 - 0.88 9.7 4.3 0.9 9.6 3.2 1.6 2 0 0 2 2 2 0 Sec61beta family DHH PF01368.20 ORF48461 - 0.16 12.2 0.4 0.62 10.3 0.0 1.8 1 1 1 2 2 2 0 DHH family Diphthamide_syn PF01866.17 ORF48418 - 0.049 13.1 0.6 0.046 13.2 0.6 1.2 1 0 0 1 1 1 0 Putative diphthamide synthesis protein Cytochrome_CBB3 PF13442.6 ORF48011 - 0.03 14.6 1.1 0.055 13.8 0.0 1.8 2 0 0 2 2 2 0 Cytochrome C oxidase, cbb3-type, subunit III NIF PF03031.18 ORF47793 - 0.13 12.0 0.7 0.15 11.8 0.7 1.1 1 0 0 1 1 1 0 NLI interacting factor-like phosphatase UPF0203 PF05254.12 ORF47189 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) FIVAR PF07554.13 ORF46999 - 0.096 13.5 0.1 0.16 12.8 0.1 1.4 1 0 0 1 1 1 0 FIVAR domain Toxin_33 PF08121.11 ORF46694 - 0.086 12.6 1.5 0.13 12.1 1.5 1.3 1 0 0 1 1 1 0 Waglerin family FAM104 PF15434.6 ORF46694 - 2.4 8.7 9.8 2.8 8.5 9.8 1.1 1 0 0 1 1 1 0 Family 104 RNase_HII PF01351.18 ORF465 - 0.2 11.4 1.5 0.2 11.5 1.5 1.0 1 0 0 1 1 1 0 Ribonuclease HII HCV_NS4a PF01006.20 ORF46464 - 0.056 13.2 1.8 0.065 13.0 1.3 1.4 1 1 0 1 1 1 0 Hepatitis C virus non-structural protein NS4a PMP1_2 PF08114.11 ORF46464 - 0.098 12.4 1.7 0.18 11.6 1.7 1.6 1 1 0 1 1 1 0 ATPase proteolipid family HTH_AraC PF00165.23 ORF45958 - 0.035 14.2 0.4 0.062 13.4 0.1 1.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family DUF1842 PF08896.10 ORF45918 - 0.1 12.8 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1842) Wzy_C PF04932.15 ORF44439 - 1.1 8.9 3.1 1.2 8.7 3.1 1.1 1 0 0 1 1 1 0 O-Antigen ligase Bee_toxin PF17454.2 ORF44439 - 1.4 9.0 4.7 2.8 8.0 0.7 2.1 2 0 0 2 2 2 0 Honey bee toxin Ribosomal_S25 PF03297.15 ORF44298 - 1.1e-20 73.7 3.6 1.2e-20 73.6 3.6 1.0 1 0 0 1 1 1 1 S25 ribosomal protein Fn3-like PF14310.6 ORF44249 - 0.098 12.8 0.2 0.14 12.2 0.2 1.3 1 0 0 1 1 1 0 Fibronectin type III-like domain Longin_2 PF18639.1 ORF4411 - 0.12 12.2 2.3 0.12 12.2 2.3 1.1 1 0 0 1 1 1 0 Yeast longin domain HTH_AraC PF00165.23 ORF44024 - 0.035 14.2 0.4 0.062 13.4 0.1 1.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family DUF1990 PF09348.10 ORF43310 - 0.0098 16.0 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1990) HTH_AraC PF00165.23 ORF43006 - 0.035 14.2 0.4 0.062 13.4 0.1 1.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family T_cell_tran_alt PF15128.6 ORF42667 - 0.011 15.6 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF1556 PF07590.11 ORF42573 - 0.17 12.2 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1556) EF-hand_1 PF00036.32 ORF42171 - 0.025 14.1 0.0 0.045 13.3 0.0 1.5 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF42171 - 0.046 13.7 0.0 0.072 13.1 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain Ank_2 PF12796.7 ORF42099 - 2.7e-06 27.9 0.0 3e-06 27.7 0.0 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF42099 - 0.00085 19.6 0.0 0.2 12.3 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank PF00023.30 ORF42099 - 0.044 14.3 0.0 12 6.6 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat TMEM40 PF15817.5 ORF42048 - 0.7 9.7 2.7 0.8 9.5 2.7 1.1 1 0 0 1 1 1 0 Transmembrane protein 40 family BCMA-Tall_bind PF09257.10 ORF41720 - 0.13 12.4 0.8 0.2 11.8 0.8 1.3 1 0 0 1 1 1 0 BCMA, TALL-1 binding SipA_VBS PF17985.1 ORF41447 - 0.094 12.6 1.0 0.18 11.8 0.3 1.8 2 0 0 2 2 2 0 SipA vinculin binding site RsgA_N PF16745.5 ORF41396 - 0.15 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 RsgA N-terminal domain PITH PF06201.13 ORF41215 - 0.00058 20.1 0.0 0.00059 20.1 0.0 1.0 1 0 0 1 1 1 1 PITH domain cNMP_binding PF00027.29 ORF41026 - 0.00024 21.1 0.0 0.0003 20.8 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain RXT2_N PF08595.11 ORF40747 - 0.18 11.8 0.0 0.2 11.7 0.0 1.0 1 0 0 1 1 1 0 RXT2-like, N-terminal Plasmid_parti PF01672.16 ORF40400 - 0.096 13.3 1.4 0.11 13.1 1.4 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein CENP-T_C PF15511.6 ORF39727 - 0.012 15.7 0.0 0.015 15.4 0.0 1.2 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold Serpentine_r_xa PF03383.15 ORF39 - 0.031 14.2 2.1 0.036 14.1 2.1 1.1 1 0 0 1 1 1 0 Caenorhabditis serpentine receptor-like protein, class xa CLN3 PF02487.17 ORF39 - 0.035 13.2 2.7 0.035 13.2 2.7 1.0 1 0 0 1 1 1 0 CLN3 protein CarbpepA_inh PF02977.15 ORF38687 - 0.011 15.5 7.2 0.014 15.1 7.2 1.2 1 0 0 1 1 1 0 Carboxypeptidase A inhibitor DUF1765 PF08578.10 ORF38385 - 0.06 13.8 3.5 0.06 13.8 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1765) DUF2878 PF11086.8 ORF38335 - 0.023 14.9 0.3 0.026 14.7 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2878) UPF0203 PF05254.12 ORF38324 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF5527 PF17665.1 ORF38269 - 0.0054 16.3 0.0 0.0066 16.0 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) SspB PF04386.13 ORF38269 - 0.019 14.8 0.0 0.021 14.7 0.0 1.0 1 0 0 1 1 1 0 Stringent starvation protein B Reticulon PF02453.17 ORF37310 - 0.025 14.6 0.5 0.028 14.4 0.5 1.0 1 0 0 1 1 1 0 Reticulon Hen1_Lam_C PF18441.1 ORF37258 - 0.083 12.7 0.0 0.083 12.7 0.0 1.1 1 0 0 1 1 1 0 Hen1 La-motif C-terminal domain DUF3845 PF12956.7 ORF37188 - 0.049 13.1 0.2 0.055 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure CH PF00307.31 ORF36709 - 0.091 12.9 0.0 0.094 12.9 0.0 1.1 1 0 0 1 1 1 0 Calponin homology (CH) domain DUF1282 PF06930.12 ORF36547 - 0.069 12.9 0.6 0.073 12.8 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1282) DUF3951 PF13131.6 ORF36541 - 0.11 12.7 0.2 0.11 12.7 0.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3951) DUF2417 PF10329.9 ORF36541 - 1.8 7.9 6.9 1.8 7.9 6.9 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) VPDSG-CTERM PF18205.1 ORF35192 - 6.5 6.7 6.6 13 5.7 6.6 1.6 1 0 0 1 1 1 0 VPDSG-CTERM motif DUF2663 PF10864.8 ORF34529 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Ras PF00071.22 ORF34128 - 0.00013 21.6 0.3 0.0003 20.4 0.1 1.7 2 0 0 2 2 2 1 Ras family CPP1-like PF11833.8 ORF34128 - 0.14 11.8 0.2 0.15 11.7 0.2 1.0 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like zf-Sec23_Sec24 PF04810.15 ORF3401 - 0.061 13.4 2.3 0.095 12.8 1.0 1.9 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger RIO1 PF01163.22 ORF3401 - 0.071 12.7 0.0 0.077 12.6 0.0 1.1 1 0 0 1 1 1 0 RIO1 family HTH_18 PF12833.7 ORF33972 - 9.1e-08 32.3 0.0 1.3e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF33972 - 1.8e-05 24.7 0.1 4.7e-05 23.4 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix proteins, AraC family NOD PF06816.13 ORF33877 - 0.085 12.5 0.2 0.13 11.9 0.2 1.3 1 0 0 1 1 1 0 NOTCH protein Skp1_POZ PF03931.15 ORF33542 - 0.028 14.6 0.0 0.04 14.1 0.0 1.2 1 0 0 1 1 1 0 Skp1 family, tetramerisation domain SSP160 PF06933.11 ORF33104 - 9.2 4.3 9.8 9.9 4.2 9.8 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF1488 PF07369.11 ORF3156 - 1.4e-16 60.2 0.0 1.6e-16 60.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1488) DUF3842 PF12953.7 ORF31295 - 0.0058 17.0 0.0 0.0063 16.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3842) DAN PF03045.15 ORF31164 - 0.019 15.0 1.1 0.024 14.7 1.1 1.2 1 0 0 1 1 1 0 DAN domain PADR1 PF08063.12 ORF31164 - 0.16 11.8 2.2 1.5 8.6 2.2 2.0 1 1 0 1 1 1 0 PADR1 (NUC008) domain DUF1435 PF07256.12 ORF31108 - 0.028 14.5 0.7 0.036 14.2 0.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1435) SMRP1 PF15181.6 ORF31033 - 0.08 12.5 0.1 0.084 12.5 0.1 1.0 1 0 0 1 1 1 0 Spermatid-specific manchette-related protein 1 TspO_MBR PF03073.15 ORF31010 - 0.076 13.1 0.5 0.088 12.9 0.5 1.1 1 0 0 1 1 1 0 TspO/MBR family MtN3_slv PF03083.16 ORF30756 - 0.033 14.2 0.0 0.045 13.8 0.0 1.2 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange zf-H2C2_5 PF13909.6 ORF30630 - 0.056 13.2 0.3 0.12 12.2 0.3 1.6 1 0 0 1 1 1 0 C2H2-type zinc-finger domain ABM PF03992.16 ORF30630 - 0.2 11.8 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 Antibiotic biosynthesis monooxygenase PTPS_related PF10131.9 ORF30535 - 1.5 7.0 6.7 1.7 6.9 6.7 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein Foamy_virus_ENV PF03408.14 ORF30535 - 1.8 6.3 4.6 1.9 6.3 4.6 1.0 1 0 0 1 1 1 0 Foamy virus envelope protein GlgS PF08971.11 ORF30207 - 0.23 11.5 0.6 0.59 10.2 0.6 1.6 1 1 0 1 1 1 0 Glycogen synthesis protein Pkr1 PF08636.10 ORF29712 - 0.032 14.4 0.0 0.044 13.9 0.0 1.4 1 0 0 1 1 1 0 ER protein Pkr1 DUF751 PF05421.11 ORF29232 - 0.058 14.1 0.5 0.058 14.1 0.5 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF751) RsdA_SigD_bd PF16751.5 ORF28499 - 0.05 13.9 0.1 0.068 13.4 0.1 1.2 1 0 0 1 1 1 0 Anti-sigma-D factor RsdA to sigma factor binding region DUF3288 PF11691.8 ORF28499 - 0.058 13.4 0.1 0.071 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3288) DUF667 PF05018.13 ORF27899 - 5.1e-25 88.3 0.1 5.5e-25 88.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF667) RsgA_N PF16745.5 ORF27884 - 0.15 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 RsgA N-terminal domain Rer1 PF03248.13 ORF27637 - 0.086 12.6 0.0 0.087 12.6 0.0 1.0 1 0 0 1 1 1 0 Rer1 family K_oxygenase PF13434.6 ORF27607 - 0.039 13.1 0.0 0.042 13.0 0.0 1.0 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) DUF2663 PF10864.8 ORF27395 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF3327 PF11806.8 ORF27145 - 0.033 14.9 0.3 0.04 14.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3327) BESS PF02944.20 ORF26921 - 0.14 12.0 0.7 0.2 11.5 0.7 1.2 1 0 0 1 1 1 0 BESS motif Promethin PF16015.5 ORF26921 - 4.7 7.2 16.4 5.2 7.0 16.4 1.0 1 0 0 1 1 1 0 Promethin DUF2706 PF10913.8 ORF26611 - 0.092 12.6 0.3 0.26 11.2 0.1 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF2706) MORN PF02493.20 ORF26579 - 7.5e-09 35.0 3.5 0.00044 20.0 0.9 2.3 2 0 0 2 2 2 2 MORN repeat SM-ATX PF14438.6 ORF26579 - 0.038 14.1 0.3 1.4 9.1 0.1 2.6 1 1 2 3 3 3 0 Ataxin 2 SM domain GPDPase_memb PF10110.9 ORF26145 - 0.16 10.7 0.1 0.18 10.5 0.1 1.0 1 0 0 1 1 1 0 Membrane domain of glycerophosphoryl diester phosphodiesterase DUF3760 PF12586.8 ORF25881 - 0.12 12.6 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3760) DUF5560 PF17715.1 ORF25783 - 0.061 12.8 5.7 0.066 12.7 5.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) EBA-175_VI PF11556.8 ORF25582 - 0.022 15.0 0.2 0.022 15.0 0.2 1.1 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 UPF0203 PF05254.12 ORF24147 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF1382 PF07131.11 ORF23329 - 0.0071 16.3 0.2 0.012 15.6 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1382) Med16 PF11635.8 ORF22890 - 0.027 12.4 0.5 0.027 12.4 0.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 DUF1631 PF07793.11 ORF22890 - 0.05 12.0 0.4 0.055 11.9 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) DUF1838 PF08894.11 ORF21979 - 0.035 13.8 0.1 0.044 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1838) HTH_Tnp_Tc3_1 PF11427.8 ORF21975 - 0.24 11.3 1.6 0.34 10.8 1.6 1.2 1 0 0 1 1 1 0 Tc3 transposase HEPN_Cthe2314 PF18730.1 ORF21969 - 0.015 15.4 0.2 0.015 15.4 0.2 1.1 1 0 0 1 1 1 0 Cthe_2314-like HEPN DUF4364 PF14277.6 ORF21969 - 0.13 12.0 0.1 0.17 11.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) DUF2463 PF09591.10 ORF21921 - 0.015 15.1 0.7 0.016 15.1 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2463) BES1_N PF05687.13 ORF21751 - 1.9 8.8 5.3 2.2 8.7 5.3 1.0 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal NinF PF05810.12 ORF21653 - 0.0065 16.3 1.5 0.008 16.0 1.5 1.1 1 0 0 1 1 1 1 NinF protein ABC_tran PF00005.27 ORF21589 - 0.086 13.4 0.1 0.094 13.2 0.1 1.0 1 0 0 1 1 1 0 ABC transporter UNC119_bdg PF15435.6 ORF2148 - 0.059 12.9 0.2 0.062 12.8 0.2 1.1 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue DUF3488 PF11992.8 ORF209 - 0.079 11.9 2.5 0.091 11.7 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) Zn_ribbon_recom PF13408.6 ORF19011 - 0.065 13.8 1.9 0.077 13.5 1.9 1.2 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain UPF0203 PF05254.12 ORF18809 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF5527 PF17665.1 ORF18665 - 0.0091 15.5 0.1 0.0098 15.4 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5527) SspB PF04386.13 ORF18665 - 0.073 13.0 0.0 0.075 12.9 0.0 1.0 1 0 0 1 1 1 0 Stringent starvation protein B DUF4722 PF15849.5 ORF18611 - 0.036 13.8 3.3 0.038 13.7 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4722) DUF2475 PF10629.9 ORF18060 - 0.048 13.9 0.4 0.059 13.6 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2475) Hist_deacetyl PF00850.19 ORF17948 - 0.094 12.2 0.2 0.094 12.2 0.2 1.0 1 0 0 1 1 1 0 Histone deacetylase domain DUF1265 PF06887.14 ORF17739 - 0.13 12.3 0.1 0.24 11.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1265) zf_C2H2_6 PF18450.1 ORF17737 - 0.13 12.0 0.7 0.33 10.7 0.7 1.8 1 0 0 1 1 1 0 Zinc Finger domain Cdc6_C PF09079.11 ORF17652 - 0.025 14.5 0.7 0.029 14.4 0.7 1.2 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain ADAM_CR_2 PF17771.1 ORF17652 - 0.49 11.0 8.9 0.59 10.7 8.9 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich domain DUF2663 PF10864.8 ORF17361 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Ntox43 PF15537.6 ORF16734 - 0.036 14.1 0.0 0.039 14.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial toxin 43 WW_FCH_linker PF16623.5 ORF16528 - 0.0055 17.4 0.6 0.0061 17.3 0.6 1.1 1 0 0 1 1 1 1 Unstructured linker region between on GAS7 protein UPF0203 PF05254.12 ORF15665 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) Ras PF00071.22 ORF15542 - 0.0046 16.6 0.0 0.0059 16.2 0.0 1.2 1 0 0 1 1 1 1 Ras family Pkinase PF00069.25 ORF152982 - 2.4e-10 40.2 0.3 2.6e-10 40.1 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF152982 - 0.00037 19.9 0.1 0.0004 19.8 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Shugoshin_C PF07557.11 ORF152797 - 0.25 11.2 0.0 0.38 10.6 0.0 1.3 1 0 0 1 1 1 0 Shugoshin C terminus AraC_N PF06719.13 ORF15275 - 0.087 12.5 0.0 0.096 12.3 0.0 1.1 1 0 0 1 1 1 0 AraC-type transcriptional regulator N-terminus TetR PF13972.6 ORF151932 - 0.074 12.8 0.6 0.1 12.3 0.6 1.3 1 0 0 1 1 1 0 Bacterial transcriptional repressor Rhodanese PF00581.20 ORF151711 - 5.5e-09 36.5 0.4 5.9e-09 36.4 0.4 1.1 1 0 0 1 1 1 1 Rhodanese-like domain B56 PF01603.20 ORF151282 - 2.9e-07 29.8 1.2 3e-07 29.8 1.2 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) UPF0203 PF05254.12 ORF150333 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) EF-hand_6 PF13405.6 ORF150109 - 1.3e-05 24.8 0.0 2.2e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF150109 - 3.2e-05 23.2 0.0 4.4e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF150109 - 0.013 15.9 0.0 0.014 15.8 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_10 PF14788.6 ORF150109 - 0.095 12.6 0.5 0.17 11.7 0.5 1.5 1 1 0 1 1 1 0 EF hand Orexin_rec2 PF03827.13 ORF149440 - 0.11 12.5 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Orexin receptor type 2 DUF2663 PF10864.8 ORF148955 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Acyl-CoA_ox_N PF14749.6 ORF14893 - 0.00016 22.2 0.3 0.00017 22.1 0.3 1.1 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal HipN PF18253.1 ORF14893 - 0.054 13.2 1.0 0.068 12.9 0.1 1.7 1 1 1 2 2 2 0 Hsp70-interacting protein N N-terminal domain Gal_Lectin PF02140.18 ORF148491 - 0.014 15.8 0.0 0.023 15.1 0.0 1.4 1 1 0 1 1 1 0 Galactose binding lectin domain UPF0203 PF05254.12 ORF148456 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF4589 PF15252.6 ORF148278 - 0.33 10.9 2.8 0.33 10.9 2.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) PglL_A PF15864.5 ORF147978 - 0.031 14.0 0.2 0.045 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein glycosylation ligase Kinase-PolyVal PF18762.1 ORF14797 - 0.029 14.3 0.3 0.032 14.2 0.3 1.1 1 0 0 1 1 1 0 Serine/Threonine/Tyrosine Kinase found in polyvalent proteins Com_YlbF PF06133.11 ORF146697 - 0.0092 16.6 0.1 0.01 16.4 0.1 1.1 1 0 0 1 1 1 1 Control of competence regulator ComK, YlbF/YmcA NHR2 PF08788.11 ORF14660 - 0.044 13.5 0.4 0.087 12.6 0.2 1.6 1 1 0 1 1 1 0 NHR2 domain like CCAP PF11105.8 ORF146484 - 0.33 10.9 2.7 0.48 10.4 2.7 1.5 1 1 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a CNOT11 PF10155.9 ORF146182 - 0.092 12.9 0.2 0.11 12.6 0.2 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 CENP-T_C PF15511.6 ORF144707 - 0.012 15.7 0.0 0.015 15.4 0.0 1.2 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold Snapin_Pallidin PF14712.6 ORF144529 - 0.012 16.0 4.0 0.012 16.0 4.0 1.5 1 1 1 2 2 2 0 Snapin/Pallidin KxDL PF10241.9 ORF144529 - 0.41 11.0 6.6 0.51 10.7 6.6 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein CC2D2AN-C2 PF15625.6 ORF144529 - 0.76 9.5 4.6 0.82 9.4 4.6 1.2 1 0 0 1 1 1 0 CC2D2A N-terminal C2 domain DUF2610 PF11020.8 ORF144070 - 0.017 15.0 0.0 0.019 14.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) YfzA PF14118.6 ORF143982 - 0.11 12.8 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 YfzA-like protein Tam41_Mmp37 PF09139.11 ORF143980 - 0.021 14.3 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 Phosphatidate cytidylyltransferase, mitochondrial DUF1143 PF06608.11 ORF143977 - 0.018 15.1 0.1 0.019 15.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) DUF192 PF02643.15 ORF143549 - 0.064 13.4 0.0 0.066 13.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized ACR, COG1430 DUF2663 PF10864.8 ORF142521 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) UPF0203 PF05254.12 ORF142210 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF2463 PF09591.10 ORF141873 - 0.015 15.1 0.7 0.016 15.1 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2463) DUF2721 PF11026.8 ORF141269 - 0.017 15.0 2.2 0.018 14.9 2.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) DUF2178 PF09946.9 ORF141269 - 0.039 14.1 3.5 0.047 13.9 3.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2178) DUF4271 PF14093.6 ORF140823 - 0.042 13.8 1.1 0.042 13.8 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) Rer1 PF03248.13 ORF140628 - 0.086 12.6 0.0 0.087 12.6 0.0 1.0 1 0 0 1 1 1 0 Rer1 family BBIP10 PF14777.6 ORF140285 - 4.9e-21 74.1 5.0 4.9e-21 74.1 5.0 1.2 1 1 0 1 1 1 1 Cilia BBSome complex subunit 10 Toxin_30 PF08117.11 ORF13989 - 0.0045 17.2 2.1 0.0089 16.3 2.1 1.5 1 0 0 1 1 1 1 Ptu family DUF5009 PF16401.5 ORF139746 - 0.13 11.7 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) YibE_F PF07907.11 ORF138207 - 0.059 12.9 6.1 0.064 12.7 6.1 1.1 1 0 0 1 1 1 0 YibE/F-like protein HTH_AraC PF00165.23 ORF13762 - 0.035 14.2 0.4 0.062 13.4 0.1 1.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family Snapin_Pallidin PF14712.6 ORF13758 - 0.00083 19.7 2.2 0.21 12.0 0.7 2.1 1 1 1 2 2 2 2 Snapin/Pallidin DUF4741 PF15897.5 ORF13755 - 0.53 10.1 3.1 0.58 10.0 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4741) Defensin_1 PF00323.19 ORF137521 - 0.14 12.7 1.3 0.14 12.7 1.3 1.9 2 0 0 2 2 2 0 Mammalian defensin UPF0203 PF05254.12 ORF136696 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) Tnp_zf-ribbon_2 PF13842.6 ORF13663 - 0.12 13.3 1.2 0.17 12.7 1.2 1.2 1 0 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon UPF0203 PF05254.12 ORF136327 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) Tom7 PF08038.12 ORF136179 - 0.078 12.6 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 TOM7 family IBR PF01485.21 ORF136167 - 0.0075 16.5 6.1 0.011 16.0 6.1 1.3 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain zf-B_box PF00643.24 ORF136167 - 0.84 9.8 9.7 0.66 10.2 4.3 2.2 1 1 1 2 2 2 0 B-box zinc finger NPR3 PF03666.13 ORF135490 - 0.26 10.0 0.6 0.27 10.0 0.6 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Histone PF00125.24 ORF135370 - 5.1e-08 33.4 0.0 5.4e-08 33.3 0.0 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 ORF135370 - 0.18 12.1 0.0 0.3 11.4 0.0 1.4 1 1 0 1 1 1 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone NIF PF03031.18 ORF135246 - 1.2e-05 25.1 0.0 1.2e-05 25.1 0.0 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF1072 PF06380.11 ORF134121 - 0.092 12.6 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1072) DUF1353 PF07087.11 ORF133064 - 0.15 11.8 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1353) Med16 PF11635.8 ORF132800 - 0.027 12.4 0.5 0.027 12.4 0.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 DUF1631 PF07793.11 ORF132800 - 0.05 12.0 0.4 0.055 11.9 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) Cyt-b5 PF00173.28 ORF132467 - 5.1e-10 39.4 0.5 9.8e-08 32.0 0.5 2.1 1 1 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain TMEM51 PF15345.6 ORF131804 - 0.17 11.7 0.7 0.16 11.8 0.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 MetallophosN PF16371.5 ORF131739 - 0.047 14.0 0.0 0.057 13.7 0.0 1.2 1 0 0 1 1 1 0 N terminal of Calcineurin-like phosphoesterase DHODB_Fe-S_bind PF10418.9 ORF131325 - 0.17 11.7 0.6 15 5.5 0.0 2.4 2 1 0 2 2 2 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B MiaE_2 PF13794.6 ORF131109 - 0.16 11.6 0.0 0.19 11.4 0.0 1.0 1 0 0 1 1 1 0 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like DUF1145 PF06611.12 ORF131077 - 0.036 14.0 3.8 0.042 13.8 3.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1145) Diphthamide_syn PF01866.17 ORF12933 - 0.049 13.1 0.6 0.046 13.2 0.6 1.2 1 0 0 1 1 1 0 Putative diphthamide synthesis protein Plasmid_parti PF01672.16 ORF129267 - 0.096 13.3 1.4 0.11 13.1 1.4 1.1 1 0 0 1 1 1 0 Putative plasmid partition protein Tmpp129 PF10272.9 ORF129015 - 0.026 13.8 0.0 0.028 13.7 0.0 1.0 1 0 0 1 1 1 0 Putative transmembrane protein precursor BES1_N PF05687.13 ORF128213 - 1.9 8.8 5.3 2.2 8.7 5.3 1.0 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks408.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks408.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks408.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks408.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TFA2_Winged_2 PF18121.1 ORF12782 - 0.0046 16.6 0.0 0.011 15.4 0.0 1.5 1 1 1 2 2 2 2 TFA2 Winged helix domain 2 DUF569 PF04601.13 ORF127528 - 0.093 12.4 0.1 0.098 12.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF569) UPF0203 PF05254.12 ORF127405 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) DUF4533 PF15047.6 ORF126566 - 0.0087 15.6 6.0 0.0087 15.6 6.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4533) LMBR1 PF04791.16 ORF126566 - 0.15 10.9 2.3 0.16 10.9 2.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein TMPIT PF07851.13 ORF126566 - 0.5 9.6 3.6 0.53 9.5 3.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF3845 PF12956.7 ORF126420 - 0.049 13.1 0.2 0.055 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure Abhydrolase_2 PF02230.16 ORF125434 - 0.18 11.5 0.2 0.18 11.6 0.2 1.1 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase zf-Tim10_DDP PF02953.15 ORF125122 - 3.6e-10 39.4 1.0 4.2e-10 39.1 1.0 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger PglL_A PF15864.5 ORF124617 - 0.031 14.0 0.2 0.045 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein glycosylation ligase DUF2663 PF10864.8 ORF124231 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Viral_coat PF00729.18 ORF123657 - 0.14 11.9 0.1 0.16 11.7 0.1 1.0 1 0 0 1 1 1 0 Viral coat protein (S domain) DUF2663 PF10864.8 ORF123407 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) TspO_MBR PF03073.15 ORF12296 - 0.076 13.1 0.5 0.088 12.9 0.5 1.1 1 0 0 1 1 1 0 TspO/MBR family DUF2663 PF10864.8 ORF122443 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) PID PF00640.23 ORF122191 - 0.13 12.2 1.6 0.15 12.1 1.6 1.0 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) DUF2663 PF10864.8 ORF121805 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) zf-tcix PF14952.6 ORF121602 - 0.04 13.5 0.7 0.077 12.6 0.7 1.5 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding ACC_epsilon PF13822.6 ORF121592 - 0.23 12.2 1.9 0.34 11.6 0.2 1.8 1 1 1 2 2 2 0 Acyl-CoA carboxylase epsilon subunit zf-Sec23_Sec24 PF04810.15 ORF120963 - 0.061 13.4 2.3 0.095 12.8 1.0 1.9 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger RIO1 PF01163.22 ORF120963 - 0.071 12.7 0.0 0.077 12.6 0.0 1.1 1 0 0 1 1 1 0 RIO1 family ISP3_C PF18045.1 ORF120595 - 0.019 14.8 0.1 0.024 14.5 0.1 1.1 1 0 0 1 1 1 0 ISP3 C-terminal ISP1_C PF18161.1 ORF120595 - 0.024 14.6 0.0 0.028 14.4 0.0 1.1 1 0 0 1 1 1 0 ISP1 C-terminal DSBA PF01323.20 ORF120520 - 0.28 10.9 1.8 0.26 11.1 1.8 1.0 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Snapin_Pallidin PF14712.6 ORF119779 - 0.012 16.0 4.0 0.012 16.0 4.0 1.5 1 1 1 2 2 2 0 Snapin/Pallidin KxDL PF10241.9 ORF119779 - 0.41 11.0 6.6 0.51 10.7 6.6 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein CC2D2AN-C2 PF15625.6 ORF119779 - 0.76 9.5 4.6 0.82 9.4 4.6 1.2 1 0 0 1 1 1 0 CC2D2A N-terminal C2 domain ATPase-cat_bd PF12156.8 ORF119300 - 0.046 14.4 1.7 0.06 14.1 1.7 1.1 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase DnaJ-X PF14308.6 ORF119220 - 0.015 14.8 5.8 0.016 14.6 5.8 1.0 1 0 0 1 1 1 0 X-domain of DnaJ-containing Arg_repressor PF01316.21 ORF119220 - 0.055 13.2 3.2 0.055 13.2 3.2 2.1 2 0 0 2 2 2 0 Arginine repressor, DNA binding domain HD_4 PF13328.6 ORF119220 - 0.25 11.1 2.1 0.31 10.8 2.1 1.3 1 0 0 1 1 1 0 HD domain DUF349 PF03993.12 ORF119220 - 0.4 11.0 9.3 0.49 10.7 9.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF349) Sec62 PF03839.16 ORF119220 - 2 7.9 8.1 2.2 7.7 8.1 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 O-antigen_lig PF13425.6 ORF119220 - 2.4 6.8 4.9 2.4 6.9 4.9 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein BBL5 PF07289.11 ORF119002 - 0.0044 16.1 0.1 0.0056 15.8 0.1 1.1 1 0 0 1 1 1 1 Bardet-Biedl syndrome 5 protein DUF1192 PF06698.11 ORF118908 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) DUF1289 PF06945.13 ORF118863 - 0.12 12.2 0.3 0.19 11.6 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1289) DUF3983 PF13137.6 ORF118764 - 0.33 10.8 3.1 0.35 10.7 1.4 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3983) SHIPPO-rpt PF07004.12 ORF117940 - 3.7e-06 27.6 0.9 0.062 14.2 0.2 2.2 2 0 0 2 2 2 2 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF117940 - 0.002 17.7 0.1 0.002 17.7 0.1 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal DUF647 PF04884.14 ORF117721 - 0.05 13.2 0.1 0.055 13.1 0.1 1.1 1 0 0 1 1 1 0 Vitamin B6 photo-protection and homoeostasis PH_17 PF18012.1 ORF117546 - 0.048 13.4 0.0 0.07 12.9 0.0 1.4 1 0 0 1 1 1 0 PH domain Herpes_BBRF1 PF04793.12 ORF116667 - 0.31 10.0 1.7 0.33 9.9 1.7 1.0 1 0 0 1 1 1 0 BRRF1-like protein SecG PF03840.14 ORF115937 - 0.54 10.4 2.9 0.6 10.2 0.3 1.9 2 0 0 2 2 2 0 Preprotein translocase SecG subunit Ribosomal_L29 PF00831.23 ORF114921 - 0.017 15.1 0.1 0.023 14.6 0.1 1.2 1 0 0 1 1 1 0 Ribosomal L29 protein DUF1117 PF06547.12 ORF114921 - 0.062 13.9 0.0 0.071 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) Nucleoporin_FG2 PF15967.5 ORF114864 - 0.97 7.9 6.9 1.1 7.8 6.9 1.0 1 0 0 1 1 1 0 Nucleoporin FG repeated region DUF5426 PF17473.2 ORF11459 - 0.16 12.2 5.8 0.22 11.8 5.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5426) Sec15 PF04091.12 ORF11459 - 0.2 11.1 2.0 0.19 11.1 2.0 1.0 1 0 0 1 1 1 0 Exocyst complex subunit Sec15-like AstA PF04958.12 ORF113481 - 0.061 11.9 0.1 0.068 11.7 0.1 1.0 1 0 0 1 1 1 0 Arginine N-succinyltransferase beta subunit SGTA_dimer PF16546.5 ORF113411 - 0.17 11.7 0.2 0.21 11.4 0.2 1.1 1 0 0 1 1 1 0 Homodimerisation domain of SGTA Sec15 PF04091.12 ORF112755 - 0.077 12.4 0.2 0.085 12.2 0.2 1.0 1 0 0 1 1 1 0 Exocyst complex subunit Sec15-like NOD PF06816.13 ORF112689 - 0.085 12.5 0.2 0.13 11.9 0.2 1.3 1 0 0 1 1 1 0 NOTCH protein DUF3845 PF12956.7 ORF112295 - 0.049 13.1 0.2 0.055 12.9 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure TcpE PF12648.7 ORF112292 - 0.043 14.3 2.9 0.051 14.1 2.9 1.2 1 0 0 1 1 1 0 TcpE family Ferlin_C PF16165.5 ORF112292 - 0.25 11.3 5.2 0.14 12.1 3.8 1.3 1 1 0 1 1 1 0 Ferlin C-terminus Baculo_11_kDa PF06143.11 ORF112292 - 0.59 9.8 6.7 0.49 10.0 5.7 1.4 1 1 0 1 1 1 0 Baculovirus 11 kDa family DUF4497 PF14924.6 ORF111807 - 0.081 13.4 0.2 0.088 13.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4497) DUF5527 PF17665.1 ORF111246 - 0.6 9.6 6.1 0.63 9.6 6.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5527) Serendipity_A PF05482.12 ORF110819 - 0.048 12.3 0.9 0.053 12.2 0.9 1.0 1 0 0 1 1 1 0 Serendipity locus alpha protein (SRY-A) DUF1314 PF07013.11 ORF110721 - 0.047 13.6 0.0 0.05 13.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1314) Ntox43 PF15537.6 ORF110621 - 0.036 14.1 0.0 0.039 14.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial toxin 43 LapA_dom PF06305.11 ORF110045 - 0.1 12.4 4.7 0.15 11.9 4.7 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Innexin PF00876.18 ORF110045 - 0.38 10.0 3.3 0.42 9.8 3.3 1.0 1 0 0 1 1 1 0 Innexin Toxin_3 PF00537.18 ORF109714 - 0.1 12.8 5.0 3 8.1 0.6 2.2 1 1 1 2 2 2 0 Scorpion toxin-like domain HTH_AraC PF00165.23 ORF109145 - 0.035 14.2 0.4 0.062 13.4 0.1 1.5 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family TcA_TcB_BD PF18276.1 ORF108080 - 0.03 13.4 0.0 0.032 13.3 0.0 1.0 1 0 0 1 1 1 0 Tc toxin complex TcA C-terminal TcB-binding domain Bowman-Birk_leg PF00228.20 ORF108054 - 4.7 7.7 0.0 4.7 7.7 0.0 3.0 4 0 0 4 4 4 0 Bowman-Birk serine protease inhibitor family AbrB_C PF18277.1 ORF108032 - 0.018 14.6 0.0 0.028 14.0 0.0 1.2 1 0 0 1 1 1 0 AbrB C-terminal domain zf-UDP PF14569.6 ORF107902 - 0.038 14.1 1.1 0.049 13.7 0.4 1.6 1 1 1 2 2 2 0 Zinc-binding RING-finger Kazal_2 PF07648.15 ORF107902 - 0.078 13.1 2.4 0.14 12.3 2.4 1.5 1 1 0 1 1 1 0 Kazal-type serine protease inhibitor domain DUF2663 PF10864.8 ORF107786 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Baculo_IE-1 PF05290.11 ORF107692 - 0.0082 16.1 2.3 0.0091 16.0 2.3 1.2 1 0 0 1 1 1 1 Baculovirus immediate-early protein (IE-0) QueH PF02677.14 ORF106722 - 0.042 13.9 1.1 0.054 13.6 1.1 1.2 1 0 0 1 1 1 0 Epoxyqueuosine reductase QueH RsgA_N PF16745.5 ORF106644 - 0.15 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 RsgA N-terminal domain Pax2_C PF12403.8 ORF106466 - 0.13 12.4 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Paired-box protein 2 C terminal DUF2427 PF10348.9 ORF106285 - 0.013 15.3 0.2 0.013 15.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2427) LapA_dom PF06305.11 ORF106056 - 0.1 12.4 4.7 0.15 11.9 4.7 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Innexin PF00876.18 ORF106056 - 0.38 10.0 3.3 0.42 9.8 3.3 1.0 1 0 0 1 1 1 0 Innexin UPF0203 PF05254.12 ORF106042 - 0.026 14.8 0.3 0.033 14.4 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0203) Ribosomal_L14e PF01929.17 ORF10567 - 0.041 14.4 0.3 0.047 14.2 0.3 1.2 1 0 0 1 1 1 0 Ribosomal protein L14 PCAF_N PF06466.11 ORF105357 - 0.28 10.7 2.9 0.32 10.5 2.9 1.0 1 0 0 1 1 1 0 PCAF (P300/CBP-associated factor) N-terminal domain DUF5326 PF17260.2 ORF105213 - 0.19 11.9 7.6 0.23 11.6 7.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5326) PhoR PF11808.8 ORF105213 - 0.42 11.0 3.6 0.24 11.8 1.8 1.4 1 1 1 2 2 2 0 Phosphate regulon sensor protein PhoR TMEM156 PF15106.6 ORF105213 - 8.3 5.8 7.8 8.9 5.7 7.8 1.1 1 0 0 1 1 1 0 TMEM156 protein family Comm PF15957.5 ORF105213 - 8.6 6.7 10.4 18 5.7 10.4 1.5 1 1 0 1 1 1 0 Commissureless Sdh_cyt PF01127.22 ORF105111 - 0.069 13.2 0.6 0.084 12.9 0.6 1.1 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF2430 PF10353.9 ORF104307 - 0.063 13.7 0.0 0.07 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2430) DUF309 PF03745.14 ORF104203 - 0.27 11.0 1.7 0.42 10.3 0.4 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF309) NSP16 PF06460.12 ORF103639 - 0.027 13.6 0.1 0.027 13.6 0.1 1.1 1 0 0 1 1 1 0 Coronavirus NSP16 Skp1_POZ PF03931.15 ORF103418 - 0.028 14.6 0.0 0.04 14.1 0.0 1.2 1 0 0 1 1 1 0 Skp1 family, tetramerisation domain DUF2663 PF10864.8 ORF103366 - 0.097 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Claudin_3 PF06653.11 ORF103120 - 0.034 14.1 5.1 0.035 14.1 5.1 1.0 1 0 0 1 1 1 0 Tight junction protein, Claudin-like WBP-1 PF11669.8 ORF103120 - 0.14 12.8 0.1 0.14 12.8 0.1 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 Ice_nucleation PF00818.17 ORF102394 - 0.43 10.7 7.2 2.3 8.5 6.4 2.3 2 0 0 2 2 2 0 Ice nucleation protein repeat PglL_A PF15864.5 ORF101503 - 0.031 14.0 0.2 0.045 13.5 0.2 1.2 1 0 0 1 1 1 0 Protein glycosylation ligase NqrM PF04400.13 ORF101224 - 0.0095 15.7 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 1 (Na+)-NQR maturation NqrM PG_binding_2 PF08823.11 ORF1012 - 0.04 14.2 0.1 0.048 14.0 0.1 1.1 1 0 0 1 1 1 0 Putative peptidoglycan binding domain Xin PF08043.12 ORF100915 - 0.58 9.9 2.5 1.2 8.9 2.5 1.5 1 0 0 1 1 1 0 Xin repeat NOD PF06816.13 ORF100528 - 0.085 12.5 0.2 0.13 11.9 0.2 1.3 1 0 0 1 1 1 0 NOTCH protein zinc_ribbon_12 PF11331.8 ORF100323 - 0.0056 16.5 3.7 0.51 10.2 1.2 2.2 2 0 0 2 2 2 2 Probable zinc-ribbon domain IGFBP PF00219.18 ORF100122 - 0.073 13.7 3.0 0.1 13.3 3.0 1.4 1 1 0 1 1 1 0 Insulin-like growth factor binding protein SIC PF03482.13 NODE_80981_length_196_cov_0.906832_g73040_i0forward_frame_1 - 0.22 11.8 0.0 0.3 11.3 0.0 1.1 1 0 0 1 1 1 0 sic protein repeat Thiol_cytolysin PF01289.19 NODE_80973_length_196_cov_0.962733_g73032_i0reverse_frame_1 - 0.061 12.2 0.2 0.066 12.1 0.2 1.0 1 0 0 1 1 1 0 Thiol-activated cytolysin Exonuc_VII_L PF02601.15 NODE_80972_length_196_cov_0.962733_g73031_i0reverse_frame_1 - 0.076 12.6 0.0 0.076 12.6 0.0 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Sec23_helical PF04815.15 NODE_80971_length_196_cov_0.975155_g73030_i0reverse_frame_1 - 0.062 13.1 0.1 0.07 13.0 0.1 1.1 1 0 0 1 1 1 0 Sec23/Sec24 helical domain PP2C PF00481.21 NODE_80952_length_196_cov_0.987578_g73011_i0reverse_frame_1 - 0.067 12.8 0.0 0.068 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein phosphatase 2C UPF0731 PF14982.6 NODE_80951_length_196_cov_0.987578_g73010_i0forward_frame_1 - 0.06 13.5 3.9 0.07 13.3 3.9 1.2 1 0 0 1 1 1 0 UPF0731 family Orai-1 PF07856.12 NODE_80949_length_196_cov_0.987578_g73008_i0reverse_frame_1 - 0.083 12.6 1.0 0.092 12.4 1.0 1.0 1 0 0 1 1 1 0 Mediator of CRAC channel activity Exo_endo_phos PF03372.23 NODE_80933_length_196_cov_0.993789_g72992_i0forward_frame_1 - 7.3e-05 22.4 0.0 7.4e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_80933_length_196_cov_0.993789_g72992_i0forward_frame_1 - 0.0014 18.5 0.0 0.0014 18.5 0.0 1.1 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase PgdA_N PF18627.1 NODE_80927_length_196_cov_0.993789_g72986_i0reverse_frame_1 - 0.0094 15.6 0.1 0.0096 15.6 0.1 1.0 1 0 0 1 1 1 1 Peptidoglycan GlcNAc deacetylase N-terminal domain U83 PF17465.2 NODE_80925_length_196_cov_0.993789_g72984_i0forward_frame_1 - 0.021 15.0 0.3 0.022 14.9 0.3 1.1 1 0 0 1 1 1 0 Chemokine-like protein, HHV-6 U83 gene product Ephrin_rec_like PF07699.13 NODE_80921_length_196_cov_0.993789_g72980_i0forward_frame_1 - 0.001 18.8 20.0 0.041 13.7 13.9 2.4 1 1 1 2 2 2 2 Putative ephrin-receptor like TNFR_c6 PF00020.18 NODE_80921_length_196_cov_0.993789_g72980_i0forward_frame_1 - 0.059 13.8 17.0 0.064 13.7 1.7 2.7 1 1 2 3 3 3 0 TNFR/NGFR cysteine-rich region Coleoptericin PF06286.11 NODE_80920_length_196_cov_0.993789_g72979_i0forward_frame_1 - 0.18 11.9 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Coleoptericin TB PF00683.17 NODE_80915_length_196_cov_1.000000_g72974_i0reverse_frame_1 - 0.016 15.0 2.1 0.021 14.6 2.1 1.3 1 0 0 1 1 1 0 TB domain HATPase_c PF02518.26 NODE_80904_length_196_cov_1.068323_g72963_i0reverse_frame_1 - 0.071 13.6 0.0 0.077 13.5 0.0 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RabGAP-TBC PF00566.18 NODE_80902_length_196_cov_1.068323_g72961_i0forward_frame_1 - 0.071 12.7 1.2 0.088 12.4 1.2 1.2 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Nitr_red_bet_C PF14711.6 NODE_80899_length_196_cov_1.080745_g72958_i0forward_frame_1 - 0.017 14.8 0.3 0.024 14.3 0.3 1.3 1 0 0 1 1 1 0 Respiratory nitrate reductase beta C-terminal Peptidase_S68 PF10461.9 NODE_80885_length_196_cov_1.149068_g72944_i0reverse_frame_1 - 0.28 11.4 4.0 4.7 7.5 1.7 2.3 2 0 0 2 2 2 0 Peptidase S68 DUF1746 PF08508.10 NODE_80882_length_196_cov_1.161491_g72941_i0reverse_frame_1 - 0.057 13.8 0.3 0.064 13.6 0.3 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1746) CDC4_D PF16856.5 NODE_80882_length_196_cov_1.161491_g72941_i0reverse_frame_1 - 0.28 11.1 0.4 0.28 11.1 0.4 2.2 2 0 0 2 2 2 0 Cell division control protein 4 dimerisation domain DUF5083 PF16890.5 NODE_80873_length_196_cov_1.180124_g72932_i0reverse_frame_1 - 0.047 13.4 0.6 0.059 13.1 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5083) DUF3332 PF11810.8 NODE_80873_length_196_cov_1.180124_g72932_i0reverse_frame_1 - 0.094 12.3 0.7 0.097 12.3 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DUF951 PF06107.11 NODE_80866_length_196_cov_1.198758_g72925_i0reverse_frame_1 - 0.09 12.7 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF951) PPR PF01535.20 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 2.4e-05 24.2 0.0 0.027 14.7 0.0 2.1 2 0 0 2 2 2 2 PPR repeat PPR_2 PF13041.6 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.0056 16.8 0.0 3 8.1 0.0 2.1 2 0 0 2 2 2 2 PPR repeat family Siah-Interact_N PF09032.11 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.014 15.7 0.0 0.017 15.4 0.0 1.2 1 0 0 1 1 1 0 Siah interacting protein, N terminal TPR_19 PF14559.6 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.023 15.2 0.1 0.044 14.3 0.1 1.5 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.097 13.5 0.3 20 6.4 0.1 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat PPR_1 PF12854.7 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.098 12.4 0.0 0.19 11.4 0.0 1.5 1 0 0 1 1 1 0 PPR repeat Ank_2 PF12796.7 NODE_80864_length_196_cov_1.204969_g72923_i0forward_frame_1 - 0.12 13.0 0.0 0.13 12.8 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Pkinase PF00069.25 NODE_80850_length_196_cov_1.242236_g72909_i0forward_frame_1 - 0.0084 15.5 0.3 0.0091 15.4 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Adeno_GP19K PF04881.13 NODE_80849_length_196_cov_1.242236_g72908_i0forward_frame_1 - 0.027 14.5 0.1 0.029 14.4 0.1 1.1 1 0 0 1 1 1 0 Adenovirus GP19K Ribosomal_L40e PF01020.17 NODE_80849_length_196_cov_1.242236_g72908_i0forward_frame_1 - 0.32 10.9 8.6 1.1 9.2 0.0 2.2 2 0 0 2 2 2 0 Ribosomal L40e family YqfQ PF14181.6 NODE_80839_length_196_cov_1.298137_g72898_i0reverse_frame_1 - 3.3 7.9 8.3 3.6 7.7 8.3 1.0 1 0 0 1 1 1 0 YqfQ-like protein Defensin_5 PF18251.1 NODE_80836_length_196_cov_1.310559_g72895_i0forward_frame_1 - 0.009 16.1 0.9 0.014 15.5 0.9 1.3 1 0 0 1 1 1 1 Fungal defensin Copsin DUF2959 PF11172.8 NODE_80834_length_196_cov_1.322981_g72893_i0forward_frame_1 - 0.0058 16.8 1.2 0.006 16.7 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2959) Endothelin PF00322.17 NODE_80833_length_196_cov_1.329193_g72892_i0forward_frame_1 - 3.6 7.3 9.6 1.4 8.6 6.3 1.9 1 1 1 2 2 2 0 Endothelin family Toxin_TOLIP PF00087.21 NODE_80831_length_196_cov_1.341615_g72890_i0reverse_frame_1 - 0.039 14.2 0.1 0.049 13.9 0.1 1.2 1 0 0 1 1 1 0 Snake toxin and toxin-like protein Lamprin PF06403.11 NODE_80829_length_196_cov_1.354037_g72888_i0reverse_frame_1 - 0.11 12.4 1.3 0.13 12.2 1.3 1.3 1 1 0 1 1 1 0 Lamprin Fusion_F0 PF13044.6 NODE_80817_length_196_cov_1.422360_g72876_i0forward_frame_1 - 0.0082 14.8 0.0 0.0088 14.7 0.0 1.0 1 0 0 1 1 1 1 Fusion glycoprotein F0, Isavirus dDENN PF03455.19 NODE_80816_length_196_cov_1.428571_g72875_i0reverse_frame_1 - 0.046 13.7 0.3 0.067 13.2 0.3 1.2 1 0 0 1 1 1 0 dDENN domain RNA_pol_Rpb5_N PF03871.14 NODE_80814_length_196_cov_1.440994_g72873_i0forward_frame_1 - 0.076 13.6 0.1 0.079 13.5 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb5, N-terminal domain FBD PF08387.10 NODE_80812_length_196_cov_1.447205_g72871_i0reverse_frame_1 - 0.014 15.3 0.2 0.03 14.2 0.2 1.7 1 1 0 1 1 1 0 FBD DUF4716 PF15837.5 NODE_80812_length_196_cov_1.447205_g72871_i0forward_frame_1 - 0.054 13.6 2.4 0.069 13.2 2.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4716) COesterase PF00135.28 NODE_80810_length_196_cov_1.447205_g72869_i0reverse_frame_1 - 0.16 10.8 0.0 0.16 10.8 0.0 1.0 1 0 0 1 1 1 0 Carboxylesterase family DDE_5 PF13546.6 NODE_80800_length_196_cov_1.478261_g72859_i0reverse_frame_1 - 0.089 12.1 2.1 0.1 11.9 2.1 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease Tim44 PF04280.15 NODE_80798_length_196_cov_1.478261_g72857_i0reverse_frame_1 - 0.1 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Tim44-like domain Tubulin_C PF03953.17 NODE_80797_length_196_cov_1.478261_g72856_i0forward_frame_1 - 4e-22 78.7 0.0 4.3e-22 78.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin C-terminal domain Rhabdo_NV PF02484.15 NODE_80794_length_196_cov_1.478261_g72853_i0reverse_frame_1 - 0.14 12.3 0.1 0.14 12.3 0.1 1.1 1 0 0 1 1 1 0 Rhabdovirus Non-virion protein TCR PF03638.15 NODE_80790_length_196_cov_1.484472_g72849_i0forward_frame_1 - 0.11 12.8 4.0 0.18 12.1 4.0 1.3 1 0 0 1 1 1 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain PLATZ PF04640.14 NODE_80789_length_196_cov_1.484472_g72848_i0forward_frame_1 - 0.14 12.8 0.2 0.14 12.8 0.2 1.1 1 0 0 1 1 1 0 PLATZ transcription factor Bunya_G2 PF03563.13 NODE_80785_length_196_cov_1.484472_g72844_i0reverse_frame_1 - 5.3 6.2 7.3 5.5 6.2 7.3 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 M157 PF11624.8 NODE_80773_length_196_cov_1.490683_g72832_i0reverse_frame_1 - 0.2 10.9 0.0 0.24 10.7 0.0 1.1 1 0 0 1 1 1 0 MHC class I-like protein M157 Fucokinase PF07959.12 NODE_80766_length_196_cov_1.490683_g72825_i0forward_frame_1 - 0.022 13.7 0.5 0.026 13.5 0.5 1.0 1 0 0 1 1 1 0 L-fucokinase DUF4719 PF15843.5 NODE_80766_length_196_cov_1.490683_g72825_i0forward_frame_1 - 0.2 11.8 0.2 0.22 11.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) Hormone_recep PF00104.30 NODE_80763_length_196_cov_1.490683_g72822_i0forward_frame_1 - 0.039 13.5 0.3 0.044 13.3 0.3 1.1 1 0 0 1 1 1 0 Ligand-binding domain of nuclear hormone receptor DUF3762 PF12591.8 NODE_80762_length_196_cov_1.490683_g72821_i0reverse_frame_1 - 0.095 13.0 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3762) zf-SNAP50_C PF12251.8 NODE_80756_length_196_cov_1.509317_g72815_i0forward_frame_1 - 0.015 15.0 0.7 0.016 14.9 0.7 1.1 1 0 0 1 1 1 0 snRNA-activating protein of 50kDa MW C terminal Transketolase_N PF00456.21 NODE_80754_length_196_cov_1.527950_g72813_i0forward_frame_1 - 0.00085 18.4 0.0 0.00085 18.4 0.0 1.1 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Tubulin PF00091.25 NODE_80750_length_196_cov_1.540373_g72809_i0reverse_frame_1 - 0.067 13.4 0.0 0.078 13.2 0.0 1.1 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain SirB PF04247.12 NODE_80748_length_196_cov_1.559006_g72807_i0reverse_frame_1 - 0.00018 21.6 0.8 0.00021 21.4 0.8 1.1 1 0 0 1 1 1 1 Invasion gene expression up-regulator, SirB Peptidase_M50B PF13398.6 NODE_80748_length_196_cov_1.559006_g72807_i0reverse_frame_1 - 0.0093 15.6 1.4 0.01 15.5 1.4 1.0 1 0 0 1 1 1 1 Peptidase M50B-like Lustrin_cystein PF14625.6 NODE_80742_length_196_cov_1.590062_g72801_i0reverse_frame_1 - 0.023 15.1 4.5 0.023 15.1 4.5 1.7 1 1 0 1 1 1 0 Lustrin, cysteine-rich repeated domain DUF1262 PF06880.11 NODE_80740_length_196_cov_1.602484_g72799_i0reverse_frame_1 - 0.021 15.2 0.1 0.023 15.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1262) BRCC36_C PF18110.1 NODE_80740_length_196_cov_1.602484_g72799_i0forward_frame_1 - 0.14 12.3 0.1 0.92 9.7 0.1 1.9 2 0 0 2 2 2 0 BRCC36 C-terminal helical domain HpaB PF03241.13 NODE_80734_length_196_cov_1.614907_g72793_i0forward_frame_1 - 0.15 11.1 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase C terminal WBP-1 PF11669.8 NODE_80728_length_196_cov_1.639752_g72787_i0reverse_frame_1 - 0.13 12.9 2.3 0.15 12.7 2.3 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 Herpes_LAMP2 PF06126.11 NODE_80727_length_196_cov_1.645963_g72786_i0forward_frame_1 - 0.013 14.1 0.3 0.016 13.9 0.3 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 Staphostatin_A PF09022.10 NODE_80723_length_196_cov_1.677019_g72782_i0reverse_frame_1 - 0.034 14.0 0.2 0.04 13.8 0.2 1.1 1 0 0 1 1 1 0 Staphostatin A Toxin_GhoT_OrtT PF10753.9 NODE_80721_length_196_cov_1.683230_g72780_i0reverse_frame_1 - 0.15 12.3 0.2 0.21 11.8 0.2 1.2 1 0 0 1 1 1 0 Toxin GhoT_OrtT HSBP1 PF06825.12 NODE_80719_length_196_cov_1.695652_g72778_i0forward_frame_1 - 0.0064 16.3 0.1 0.0088 15.9 0.1 1.2 1 0 0 1 1 1 1 Heat shock factor binding protein 1 SWIM PF04434.17 NODE_80706_length_196_cov_1.739130_g72765_i0reverse_frame_1 - 0.0029 17.2 2.6 0.0058 16.3 2.6 1.5 1 0 0 1 1 1 1 SWIM zinc finger Methyltransf_25 PF13649.6 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 5.9e-07 30.1 0.0 8.6e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.00012 22.6 0.0 0.00017 22.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.0002 21.2 0.0 0.00024 20.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.0011 19.7 0.0 0.0018 19.0 0.0 1.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.0021 17.9 0.0 0.0024 17.7 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.016 14.8 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase small domain PrmA PF06325.13 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.058 12.8 0.0 0.062 12.7 0.0 1.0 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.089 12.3 0.0 0.099 12.1 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_32 PF13679.6 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.1 12.6 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.11 11.7 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase RrnaAD PF00398.20 NODE_80704_length_196_cov_1.739130_g72763_i0forward_frame_1 - 0.28 10.2 0.0 0.28 10.2 0.0 1.0 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Colicin PF01024.19 NODE_80700_length_196_cov_1.788820_g72759_i0reverse_frame_1 - 0.069 13.0 0.4 0.075 12.9 0.4 1.1 1 0 0 1 1 1 0 Colicin pore forming domain Zf_RING PF16744.5 NODE_80700_length_196_cov_1.788820_g72759_i0reverse_frame_1 - 0.095 12.8 1.2 0.13 12.4 1.2 1.3 1 1 0 1 1 1 0 KIAA1045 RING finger EMC3_TMCO1 PF01956.16 NODE_80700_length_196_cov_1.788820_g72759_i0reverse_frame_1 - 0.21 11.3 3.7 0.24 11.1 3.7 1.1 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like LapA_dom PF06305.11 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_1 - 0.12 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain EMC3_TMCO1 PF01956.16 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_1 - 0.18 11.5 0.0 0.21 11.3 0.0 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like cEGF PF12662.7 NODE_80693_length_196_cov_1.850932_g72752_i0forward_frame_1 - 0.019 14.9 0.7 0.019 14.9 0.7 3.7 4 2 0 4 4 4 0 Complement Clr-like EGF-like Lustrin_cystein PF14625.6 NODE_80693_length_196_cov_1.850932_g72752_i0forward_frame_1 - 0.023 15.1 13.4 6 7.3 0.1 3.1 2 1 1 3 3 3 0 Lustrin, cysteine-rich repeated domain Opy2 PF09463.10 NODE_80693_length_196_cov_1.850932_g72752_i0forward_frame_1 - 1.8 8.9 14.0 3 8.2 4.6 2.8 3 0 0 3 3 3 0 Opy2 protein Fcf2 PF08698.11 NODE_80680_length_196_cov_1.913043_g72739_i0reverse_frame_1 - 0.09 13.2 0.0 0.09 13.2 0.0 1.1 1 0 0 1 1 1 0 Fcf2 pre-rRNA processing APOBEC_C PF05240.14 NODE_80669_length_196_cov_1.975155_g72728_i0reverse_frame_1 - 0.087 12.8 0.0 0.094 12.7 0.0 1.1 1 0 0 1 1 1 0 APOBEC-like C-terminal domain LAT PF15234.6 NODE_80665_length_196_cov_1.981366_g72724_i0forward_frame_1 - 0.18 11.5 0.9 0.18 11.5 0.9 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells AGH PF17558.2 NODE_80660_length_196_cov_2.006211_g72719_i0forward_frame_1 - 0.093 12.9 0.5 0.1 12.8 0.5 1.1 1 0 0 1 1 1 0 Androgenic gland hormone FUSC PF04632.12 NODE_80652_length_196_cov_2.099379_g72711_i0reverse_frame_1 - 5.5e-12 45.0 0.4 6.2e-12 44.9 0.4 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family FlxA PF14282.6 NODE_80647_length_196_cov_2.136646_g72706_i0reverse_frame_1 - 0.014 15.4 1.6 0.02 14.9 1.6 1.3 1 0 0 1 1 1 0 FlxA-like protein HEPN_SAV2148 PF18725.1 NODE_80642_length_196_cov_2.204969_g72701_i0forward_frame_1 - 0.064 12.7 0.0 0.072 12.5 0.0 1.1 1 0 0 1 1 1 0 SAV2148-like HEPN HEAT PF02985.22 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 3.4e-06 26.8 0.6 5.7e-06 26.1 0.1 1.7 2 0 0 2 2 2 1 HEAT repeat HEAT_EZ PF13513.6 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 9.5e-06 26.0 0.0 2.3e-05 24.8 0.0 1.6 2 0 0 2 2 2 1 HEAT-like repeat Vac14_Fab1_bd PF12755.7 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0002 21.9 0.0 0.0002 21.9 0.0 1.1 1 0 0 1 1 1 1 Vacuolar 14 Fab1-binding region Arm PF00514.23 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0018 18.3 0.1 0.0026 17.7 0.1 1.4 1 0 0 1 1 1 1 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0025 18.2 0.0 0.0025 18.2 0.0 1.2 1 0 0 1 1 1 1 HEAT repeats Cnd1 PF12717.7 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0031 17.6 0.0 0.0035 17.4 0.0 1.1 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Prolamin_like PF05617.11 NODE_80638_length_196_cov_2.254658_g72697_i0reverse_frame_1 - 0.0036 17.5 0.2 0.0044 17.2 0.2 1.2 1 0 0 1 1 1 1 Prolamin-like DegT_DnrJ_EryC1 PF01041.17 NODE_80636_length_196_cov_2.260870_g72695_i0reverse_frame_1 - 6.9e-26 91.4 0.5 7.3e-26 91.3 0.5 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 NODE_80636_length_196_cov_2.260870_g72695_i0reverse_frame_1 - 0.0002 20.6 0.0 0.00021 20.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Peptidase_M3 PF01432.20 NODE_80624_length_196_cov_2.453416_g72683_i0reverse_frame_1 - 0.0047 16.3 0.1 0.0052 16.1 0.1 1.1 1 0 0 1 1 1 1 Peptidase family M3 Antimicrobial19 PF08225.11 NODE_80624_length_196_cov_2.453416_g72683_i0reverse_frame_1 - 0.27 10.9 0.1 0.27 10.9 0.1 2.1 2 0 0 2 2 2 0 Pseudin antimicrobial peptide DUF5549 PF17703.1 NODE_80607_length_196_cov_2.763975_g72666_i0forward_frame_1 - 0.0065 16.1 4.0 0.0073 16.0 4.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5549) Fer4_21 PF14697.6 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 3.6e-11 43.0 10.3 4.4e-11 42.8 10.3 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 9.8e-10 37.8 12.1 8.5e-07 28.5 3.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 2.1e-08 34.9 5.3 7.2e-05 23.6 1.2 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 1e-07 32.4 4.3 1.7e-05 25.3 0.9 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 4e-05 23.7 9.2 6.5e-05 23.0 9.2 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 0.0006 19.9 11.2 0.0089 16.1 5.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 0.0012 18.8 10.8 0.0024 17.9 3.2 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 0.0022 18.0 13.5 0.014 15.5 5.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 0.014 16.3 17.8 0.45 11.6 0.8 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 0.018 15.6 3.0 0.018 15.6 3.0 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 0.049 14.1 9.4 0.16 12.6 4.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 1.4 9.5 11.0 0.67 10.4 5.3 2.1 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 1.4 9.7 14.5 5.8 7.7 6.3 2.8 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 3.7 8.2 13.4 10 6.8 5.5 2.6 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 NODE_80604_length_196_cov_2.844720_g72663_i0reverse_frame_1 - 5 7.3 9.7 0.86 9.8 4.1 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Aldo_ket_red PF00248.21 NODE_80586_length_196_cov_3.633540_g72645_i0reverse_frame_1 - 8.7e-05 21.9 0.0 8.7e-05 21.9 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family PLA2_inh PF02988.15 NODE_80582_length_196_cov_3.987578_g72641_i0forward_frame_1 - 0.098 13.3 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Phospholipase A2 inhibitor Tho1_MOS11_C PF18592.1 NODE_80578_length_196_cov_6.509317_g72637_i0reverse_frame_1 - 0.042 13.7 0.4 0.056 13.2 0.4 1.2 1 0 0 1 1 1 0 Tho1/MOS11 C-terminal domain Defensin_2 PF01097.18 NODE_80572_length_196_cov_18.770186_g72631_i0forward_frame_1 - 0.04 13.9 8.2 0.054 13.4 3.7 2.2 2 0 0 2 2 2 0 Arthropod defensin DUF4575 PF15143.6 NODE_80566_length_196_cov_33.031056_g72625_i0forward_frame_1 - 0.049 13.8 0.1 0.049 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4575) Histone_H2A_C PF16211.5 NODE_80564_length_196_cov_36.304348_g72623_i0forward_frame_1 - 0.34 10.7 4.3 0.66 9.8 4.3 1.5 1 0 0 1 1 1 0 C-terminus of histone H2A Thioredoxin PF00085.20 NODE_80560_length_196_cov_39.701863_g72619_i0reverse_frame_1 - 0.024 14.6 0.1 0.027 14.5 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin Zn_ribbon_17 PF17120.5 NODE_80558_length_196_cov_40.031056_g72617_i0forward_frame_1 - 0.027 14.1 7.3 0.034 13.8 7.3 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Orthopox_A43R PF06517.11 NODE_80557_length_196_cov_40.782609_g72616_i0forward_frame_1 - 0.21 11.4 5.1 0.22 11.3 5.1 1.0 1 0 0 1 1 1 0 Orthopoxvirus A43R protein Histone_H2A_C PF16211.5 NODE_80549_length_196_cov_46.807453_g72608_i0reverse_frame_1 - 0.49 10.2 3.8 47 3.8 0.0 2.1 2 0 0 2 2 2 0 C-terminus of histone H2A AOX PF01786.17 NODE_80549_length_196_cov_46.807453_g72608_i0forward_frame_1 - 0.097 12.2 0.0 0.099 12.2 0.0 1.0 1 0 0 1 1 1 0 Alternative oxidase Frag1 PF10277.9 NODE_80547_length_196_cov_47.329193_g72606_i0forward_frame_1 - 0.034 13.7 2.5 0.037 13.5 2.5 1.0 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family Ribosomal_S17 PF00366.20 NODE_80544_length_196_cov_54.000000_g72603_i0forward_frame_1 - 1.5e-07 31.4 0.0 2.5e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S17 Cyto_heme_lyase PF01265.17 NODE_80538_length_196_cov_67.776398_g72597_i0forward_frame_1 - 0.026 14.1 0.0 0.03 13.9 0.0 1.0 1 0 0 1 1 1 0 Cytochrome c/c1 heme lyase DIM PF08194.12 NODE_80538_length_196_cov_67.776398_g72597_i0forward_frame_1 - 0.19 12.0 0.0 0.19 12.0 0.0 1.8 2 0 0 2 2 2 0 DIM protein Auxin_inducible PF02519.14 NODE_80534_length_196_cov_71.925466_g72593_i0reverse_frame_1 - 0.019 15.1 0.5 0.043 14.0 0.1 1.7 1 1 1 2 2 2 0 Auxin responsive protein Herpes_UL24 PF01646.16 NODE_80534_length_196_cov_71.925466_g72593_i0forward_frame_1 - 0.07 13.1 0.5 0.078 12.9 0.5 1.0 1 0 0 1 1 1 0 Herpes virus proteins UL24 and UL76 Gpr1_Fun34_YaaH PF01184.19 NODE_80528_length_196_cov_93.850932_g72587_i0forward_frame_1 - 0.028 14.0 0.3 0.03 13.9 0.3 1.0 1 0 0 1 1 1 0 GPR1/FUN34/yaaH family Mating_C PF12737.7 NODE_80524_length_196_cov_119.024845_g72583_i0reverse_frame_1 - 0.1 11.8 2.5 0.1 11.8 2.5 1.0 1 0 0 1 1 1 0 C-terminal domain of homeodomain 1 MtmB PF05369.12 NODE_80524_length_196_cov_119.024845_g72583_i0reverse_frame_1 - 0.12 11.2 0.2 0.11 11.3 0.2 1.1 1 0 0 1 1 1 0 Monomethylamine methyltransferase MtmB DUF562 PF04763.12 NODE_80522_length_196_cov_135.726708_g72581_i0forward_frame_1 - 0.087 12.3 0.5 0.095 12.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF562) Spt4 PF06093.13 NODE_80517_length_196_cov_221.428571_g72576_i0reverse_frame_1 - 0.081 13.0 3.6 0.081 13.0 3.6 1.6 1 1 0 1 1 1 0 Spt4/RpoE2 zinc finger Sugar_tr PF00083.24 NODE_80515_length_196_cov_321.105590_g72574_i0forward_frame_1 - 7.3e-07 28.4 1.1 7.6e-07 28.3 1.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Agglutinin PF07468.11 NODE_80514_length_196_cov_343.428571_g72573_i0reverse_frame_1 - 0.023 14.9 0.3 0.025 14.8 0.3 1.0 1 0 0 1 1 1 0 Agglutinin domain TMEM208_SND2 PF05620.11 NODE_80508_length_196_cov_119487.993789_g72567_i0forward_frame_1 - 0.56 10.0 3.3 0.22 11.3 0.9 1.5 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 CFEM PF05730.11 NODE_80504_length_197_cov_0.833333_g72563_i0reverse_frame_1 - 0.38 10.9 6.3 0.64 10.2 6.3 1.4 1 1 0 1 1 1 0 CFEM domain FAP PF07174.11 NODE_80502_length_197_cov_0.858025_g72561_i0reverse_frame_1 - 0.87 9.0 12.5 0.97 8.8 12.5 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_80502_length_197_cov_0.858025_g72561_i0forward_frame_1 - 0.49 10.4 9.0 4.5 7.2 9.0 1.9 1 1 0 1 1 1 0 Lamprin SHIPPO-rpt PF07004.12 NODE_80494_length_197_cov_0.938272_g72553_i0reverse_frame_1 - 0.0048 17.8 6.6 0.035 15.0 2.4 2.5 2 1 0 2 2 2 2 Sperm-tail PG-rich repeat HipN PF18253.1 NODE_80493_length_197_cov_0.944444_g72552_i0reverse_frame_1 - 0.03 14.0 0.3 0.044 13.5 0.3 1.2 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain E3_UbLigase_EDD PF11547.8 NODE_80483_length_197_cov_0.981481_g72542_i0forward_frame_1 - 0.043 13.5 0.0 0.053 13.2 0.0 1.1 1 0 0 1 1 1 0 E3 ubiquitin ligase EDD DUF2325 PF10087.9 NODE_80479_length_197_cov_0.981481_g72538_i0forward_frame_1 - 0.079 13.1 2.6 0.28 11.3 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) MAGP PF05507.11 NODE_80479_length_197_cov_0.981481_g72538_i0forward_frame_1 - 0.3 11.5 4.8 0.36 11.2 4.8 1.1 1 0 0 1 1 1 0 Microfibril-associated glycoprotein (MAGP) MRG PF05712.13 NODE_80476_length_197_cov_0.981481_g72535_i0reverse_frame_1 - 0.033 13.5 0.0 0.035 13.4 0.0 1.1 1 0 0 1 1 1 0 MRG MANEC PF07502.14 NODE_80469_length_197_cov_0.987654_g72528_i0forward_frame_1 - 0.0089 16.3 0.2 0.01 16.1 0.2 1.1 1 0 0 1 1 1 1 MANEC domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks409.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks409.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks409.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks409.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:38:12 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2838 PF10998.8 ORF11270 - 9.8e-10 38.7 16.5 9.8e-10 38.7 16.5 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF2838) Autophagy_C PF10381.9 NODE_14991_length_1149_cov_7.855476_g11310_i0reverse_frame_3 - 1 8.9 4.6 21 4.7 0.9 2.8 2 0 0 2 2 2 0 Autophagocytosis associated protein C-terminal PHD PF00628.29 ORF91514 - 1e-06 28.5 8.4 2.8e-06 27.1 8.4 1.8 1 0 0 1 1 1 1 PHD-finger zf-HC5HC2H PF13771.6 ORF91514 - 0.066 13.5 0.7 0.066 13.5 0.7 2.5 2 1 0 2 2 2 0 PHD-like zinc-binding domain HTH_Tnp_IS630 PF01710.16 ORF91514 - 0.14 12.2 0.0 0.14 12.2 0.0 2.9 2 1 1 3 3 3 0 Transposase MAGI_u1 PF16663.5 ORF91514 - 8 6.6 8.4 8.3 6.6 0.1 2.7 2 0 0 2 2 2 0 Unstructured region on MAGI CAP PF00188.26 ORF86837 - 5.4e-07 30.5 0.0 1e-06 29.6 0.0 1.5 1 0 0 1 1 1 1 Cysteine-rich secretory protein family Dicty_REP PF05086.12 ORF86837 - 9.1 4.1 8.1 12 3.8 8.1 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Peptidase_A22B PF04258.13 ORF80382 - 2.9e-74 250.2 13.1 2.9e-74 250.2 13.1 1.7 1 1 1 2 2 2 1 Signal peptide peptidase DUF4191 PF13829.6 ORF80382 - 0.067 12.5 2.5 0.79 9.0 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) WD40 PF00400.32 ORF74719 - 0.13 13.2 17.2 2 9.4 0.0 6.4 7 0 0 7 7 7 0 WD domain, G-beta repeat VGPC1_C PF16799.5 ORF7446 - 0.012 15.6 1.4 0.039 13.9 1.4 1.9 1 0 0 1 1 1 0 C-terminal membrane-localisation domain of ion-channel, VCN1 Peptidase_A3 PF02160.15 ORF7446 - 0.16 11.4 3.9 0.24 10.9 3.9 1.2 1 0 0 1 1 1 0 Cauliflower mosaic virus peptidase (A3) TFIIA PF03153.13 ORF7446 - 0.21 11.6 13.8 0.31 11.0 13.8 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Exonuc_VII_L PF02601.15 ORF7446 - 3 7.3 9.8 4.8 6.6 9.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Asp PF00026.23 ORF72203 - 5.7e-44 150.8 12.5 7.4e-44 150.4 12.5 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF72203 - 2.3e-09 37.7 1.3 2.3e-05 24.7 0.1 2.2 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal fragilysinNterm PF16376.5 ORF72203 - 0.00044 20.0 1.5 0.007 16.1 0.0 2.4 2 0 0 2 2 2 1 N-terminal domain of fragilysin Metallophos PF00149.28 ORF71559 - 1.7e-13 51.6 1.6 2.5e-13 51.0 1.6 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF71559 - 0.023 15.5 0.2 0.058 14.3 0.2 1.6 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C RIO1 PF01163.22 ORF67294 - 1.1e-44 152.2 0.2 1.1e-44 152.2 0.2 1.9 2 0 0 2 2 2 1 RIO1 family APH PF01636.23 ORF67294 - 4.6e-08 33.3 0.9 0.00021 21.3 0.2 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 ORF67294 - 8.2e-08 31.8 5.3 1e-05 25.0 0.2 3.3 2 1 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family Rio2_N PF09202.11 ORF67294 - 1.4e-06 28.5 2.3 1.5e-06 28.4 0.4 2.1 3 0 0 3 3 3 1 Rio2, N-terminal zf-RING_2 PF13639.6 ORF5589 - 1.8e-10 40.9 6.1 4.5e-10 39.7 6.1 1.7 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF5589 - 6.4e-09 35.5 7.3 1.6e-08 34.2 7.3 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF5589 - 2.1e-08 33.9 6.5 5.3e-08 32.6 6.5 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF5589 - 1.9e-07 30.8 4.5 4.6e-07 29.6 4.5 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF5589 - 1e-06 28.3 4.7 3e-06 26.9 2.6 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF5589 - 1.5e-05 24.9 1.7 0.00025 21.0 1.0 2.7 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF5589 - 4.2e-05 23.6 3.9 0.0002 21.5 3.9 2.2 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-rbx1 PF12678.7 ORF5589 - 6e-05 23.3 7.0 0.0003 21.0 7.0 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF5589 - 0.00033 20.5 6.1 0.001 19.0 6.1 1.9 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF5589 - 0.0014 18.4 3.8 0.0031 17.3 3.8 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Rad50_zn_hook PF04423.14 ORF5589 - 0.041 13.7 0.1 0.091 12.6 0.1 1.5 1 0 0 1 1 1 0 Rad50 zinc hook motif zf-RING_4 PF14570.6 ORF5589 - 0.068 13.0 4.6 0.26 11.1 4.6 2.1 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-ANAPC11 PF12861.7 ORF5589 - 0.1 12.7 3.4 0.3 11.2 3.1 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-HC5HC2H PF13771.6 ORF5589 - 0.31 11.3 3.9 1.3 9.4 2.6 2.3 1 1 1 2 2 2 0 PHD-like zinc-binding domain zf-C2HC_2 PF13913.6 ORF5589 - 2.9 7.9 6.3 0.3 11.0 1.2 2.0 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Metallophos PF00149.28 ORF5431 - 1.8e-12 48.2 0.6 3e-12 47.5 0.6 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF5431 - 0.048 12.7 1.7 0.15 11.0 0.5 2.0 2 0 0 2 2 2 0 PhoD-like phosphatase EF-hand_7 PF13499.6 ORF47089 - 6.1e-06 26.6 0.0 0.0051 17.2 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF47089 - 0.0017 18.1 0.0 27 5.0 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF47089 - 0.21 11.2 0.0 3.7 7.3 0.0 2.8 3 0 0 3 3 3 0 EF hand CCD48 PF15799.5 ORF47089 - 0.24 9.7 2.1 0.43 8.8 0.0 2.1 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 48 CMAS PF02353.20 ORF3771 - 2.6e-106 354.9 0.3 3.5e-106 354.5 0.3 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 ORF3771 - 1.2e-15 58.0 0.0 2.2e-15 57.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF3771 - 1.7e-14 54.2 0.0 3.3e-14 53.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF3771 - 8.6e-13 48.4 0.0 1.3e-12 47.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF3771 - 1.6e-10 41.0 0.0 2.7e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF3771 - 2.4e-08 34.6 0.0 4.9e-08 33.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF3771 - 5.1e-06 26.4 0.0 7.5e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 ORF3771 - 7.7e-05 22.3 0.0 0.00013 21.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.19 ORF3771 - 0.00021 21.5 0.0 0.0003 20.9 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase MetW PF07021.12 ORF3771 - 0.00082 19.0 0.1 0.0014 18.3 0.1 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.6 ORF3771 - 0.0011 18.9 0.0 0.0018 18.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 ORF3771 - 0.0017 18.1 0.0 0.033 13.8 0.0 2.2 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) TehB PF03848.14 ORF3771 - 0.0048 16.3 0.0 0.0071 15.8 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB DOT1 PF08123.13 ORF3771 - 0.022 14.3 0.1 0.041 13.4 0.1 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 RrnaAD PF00398.20 ORF3771 - 0.044 12.8 0.0 0.08 12.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_9 PF08003.11 ORF3771 - 0.09 11.7 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_18 PF12847.7 ORF3771 - 0.11 12.5 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain ADH_zinc_N PF00107.26 ORF3771 - 0.13 12.3 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding dehydrogenase GCD14 PF08704.10 ORF3771 - 0.14 11.9 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_15 PF09445.10 ORF3771 - 0.14 11.7 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_4 PF02390.17 ORF3771 - 0.18 11.3 0.0 0.29 10.6 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Ribonuc_red_sm PF00268.21 ORF35151 - 7.6e-113 376.6 0.5 9.6e-113 376.3 0.5 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain DUF2585 PF10755.9 ORF35151 - 0.0048 16.6 0.1 0.024 14.3 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2585) DrsE_2 PF13686.6 ORF35151 - 0.051 13.5 0.6 0.29 11.0 0.6 1.9 1 1 0 1 1 1 0 DsrE/DsrF/DrsH-like family BROMI PF14961.6 ORF35151 - 0.092 10.2 0.0 0.12 9.7 0.0 1.1 1 0 0 1 1 1 0 Broad-minded protein PPR_2 PF13041.6 ORF34944 - 2.3e-42 143.0 2.3 6.7e-08 32.6 0.0 8.8 5 4 4 9 9 9 8 PPR repeat family PPR PF01535.20 ORF34944 - 2.4e-40 134.0 13.4 0.00066 19.8 0.0 10.2 10 0 0 10 10 10 9 PPR repeat PPR_3 PF13812.6 ORF34944 - 2.2e-38 130.1 0.0 2e-09 37.4 0.0 6.4 5 1 1 6 6 6 6 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF34944 - 3.6e-30 103.4 0.0 4.1e-06 26.4 0.0 8.4 9 0 0 9 9 9 5 PPR repeat PPR_long PF17177.4 ORF34944 - 3.3e-23 82.2 1.8 2e-05 24.1 0.0 5.0 1 1 4 5 5 5 5 Pentacotripeptide-repeat region of PRORP TPR_14 PF13428.6 ORF34944 - 3.7e-09 36.6 24.1 1.2 10.2 0.2 9.5 5 3 5 10 10 10 3 Tetratricopeptide repeat TPR_4 PF07721.14 ORF34944 - 2.3e-06 27.7 24.4 0.11 13.2 1.0 8.5 9 0 0 9 9 9 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF34944 - 0.00099 19.6 8.2 6.5 7.4 0.3 5.9 3 3 5 8 8 8 2 Tetratricopeptide repeat B12-binding_2 PF02607.17 ORF34944 - 0.04 14.3 0.9 18 5.9 0.1 3.6 3 0 0 3 3 3 0 B12 binding domain Clathrin PF00637.20 ORF34944 - 0.12 12.3 0.0 2.9 7.7 0.1 2.8 3 0 0 3 3 3 0 Region in Clathrin and VPS TPR_16 PF13432.6 ORF34944 - 0.14 12.9 20.8 3.1 8.5 0.9 6.9 7 1 1 8 8 7 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF34944 - 0.31 11.4 6.4 19 5.8 0.4 4.9 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF34944 - 1.4 8.9 9.5 1.3 9.0 0.1 5.0 5 0 0 5 5 5 0 Tetratricopeptide repeat Metallophos PF00149.28 ORF3107 - 1.5e-13 51.7 3.0 2.4e-13 51.1 3.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF3107 - 0.062 14.2 0.0 0.17 12.8 0.0 1.7 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C MORN PF02493.20 ORF2730 - 2.4e-17 61.7 37.2 0.0007 19.3 0.0 9.2 9 0 0 9 9 9 6 MORN repeat Ribosomal_S6 PF01250.17 ORF2730 - 1.2 9.4 4.7 0.99 9.7 0.1 2.7 3 0 0 3 3 3 0 Ribosomal protein S6 Metallophos PF00149.28 ORF25191 - 1.8e-12 48.2 0.6 3e-12 47.5 0.6 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF25191 - 0.048 12.7 1.7 0.15 11.0 0.5 2.0 2 0 0 2 2 2 0 PhoD-like phosphatase CAP PF00188.26 ORF19702 - 1.2e-08 35.8 0.0 2.3e-08 34.9 0.0 1.5 1 0 0 1 1 1 1 Cysteine-rich secretory protein family Dicty_REP PF05086.12 ORF19702 - 8.9 4.1 8.1 12 3.8 8.1 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Metallophos PF00149.28 ORF17925 - 1.7e-13 51.6 1.6 2.5e-13 51.0 1.6 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF17925 - 0.023 15.5 0.2 0.058 14.3 0.2 1.6 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C Conotoxin PF02950.17 ORF151925 - 3.3 8.8 8.1 23 6.1 1.0 2.5 2 0 0 2 2 2 0 Conotoxin MORN PF02493.20 ORF151814 - 3.2e-18 64.5 40.5 0.00062 19.5 0.1 9.5 10 0 0 10 10 10 7 MORN repeat Peptidase_C1 PF00112.23 ORF148813 - 3.1e-44 151.7 9.2 4.2e-44 151.2 9.2 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF148813 - 2.6e-12 47.0 6.8 6e-12 45.8 6.8 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF148813 - 1.4e-06 27.4 2.0 0.00019 20.4 0.2 2.4 2 0 0 2 2 2 2 Peptidase C1-like family Atg29_N PF18388.1 ORF148813 - 0.091 12.6 0.2 1.1 9.2 0.1 2.2 2 0 0 2 2 2 0 Atg29 N-terminal domain p450 PF00067.22 ORF146221 - 8.3e-46 156.7 0.8 9e-30 103.8 0.0 2.3 2 1 0 2 2 2 2 Cytochrome P450 PHD PF00628.29 ORF142093 - 1e-06 28.5 8.4 2.8e-06 27.1 8.4 1.8 1 0 0 1 1 1 1 PHD-finger zf-HC5HC2H PF13771.6 ORF142093 - 0.066 13.5 0.7 0.066 13.5 0.7 2.5 2 1 0 2 2 2 0 PHD-like zinc-binding domain HTH_Tnp_IS630 PF01710.16 ORF142093 - 0.14 12.2 0.0 0.14 12.2 0.0 2.9 2 1 1 3 3 3 0 Transposase MAGI_u1 PF16663.5 ORF142093 - 8 6.6 8.4 8.3 6.6 0.1 2.7 2 0 0 2 2 2 0 Unstructured region on MAGI PHD PF00628.29 ORF138246 - 1e-06 28.5 8.4 2.8e-06 27.1 8.4 1.8 1 0 0 1 1 1 1 PHD-finger zf-HC5HC2H PF13771.6 ORF138246 - 0.066 13.5 0.7 0.066 13.5 0.7 2.5 2 1 0 2 2 2 0 PHD-like zinc-binding domain HTH_Tnp_IS630 PF01710.16 ORF138246 - 0.14 12.2 0.0 0.14 12.2 0.0 2.9 2 1 1 3 3 3 0 Transposase MAGI_u1 PF16663.5 ORF138246 - 8 6.6 8.4 8.3 6.6 0.1 2.7 2 0 0 2 2 2 0 Unstructured region on MAGI PHD20L1_u1 PF16660.5 ORF137873 - 0.13 13.0 0.5 0.13 13.0 0.5 1.9 2 0 0 2 2 2 0 PHD finger protein 20-like protein 1 FAD_binding_2 PF00890.24 ORF136550 - 1.6e-45 156.0 0.0 2e-45 155.6 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 ORF136550 - 0.083 12.1 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 Thi4 family G-patch_2 PF12656.7 ORF131883 - 1.4e-15 57.1 0.0 3.4e-15 55.9 0.0 1.7 1 0 0 1 1 1 1 G-patch domain KOW PF00467.29 ORF131883 - 0.001 18.9 2.9 0.033 14.2 0.4 2.6 2 0 0 2 2 2 2 KOW motif Peptidase_C1 PF00112.23 ORF128376 - 8.6e-38 130.6 0.5 1.3e-37 130.0 0.5 1.2 1 0 0 1 1 1 1 Papain family cysteine protease ABC_tran PF00005.27 ORF12714 - 3.6e-32 111.8 0.0 6.1e-32 111.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF12714 - 1.7e-06 27.9 0.0 2.1e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF12714 - 2.9e-05 23.6 0.1 0.013 14.9 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 ORF12714 - 0.00066 19.6 0.0 0.0013 18.7 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_18 PF13238.6 ORF12714 - 0.00097 19.7 0.1 0.029 14.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 ORF12714 - 0.0014 18.9 0.2 0.0059 16.9 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 ORF12714 - 0.0016 19.0 0.0 0.0027 18.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 ORF12714 - 0.0038 17.1 0.0 0.0056 16.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF12714 - 0.0043 16.8 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain T2SSE PF00437.20 ORF12714 - 0.0094 15.0 0.0 0.018 14.1 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein NB-ARC PF00931.22 ORF12714 - 0.017 14.3 0.1 0.046 12.9 0.1 1.7 1 1 0 1 1 1 0 NB-ARC domain IstB_IS21 PF01695.17 ORF12714 - 0.03 14.1 0.0 7.7 6.2 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_16 PF13191.6 ORF12714 - 0.036 14.4 0.0 0.2 12.0 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain Rad17 PF03215.15 ORF12714 - 0.13 12.2 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain MobB PF03205.14 ORF12714 - 0.13 12.1 0.0 0.49 10.3 0.0 2.0 1 1 1 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DEAD PF00270.29 ORF12714 - 0.17 11.7 0.0 0.4 10.4 0.0 1.6 1 1 0 1 1 1 0 DEAD/DEAH box helicase DUF87 PF01935.17 ORF12714 - 0.18 11.9 0.0 0.39 10.8 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain BTB PF00651.31 ORF124518 - 2.1e-21 76.2 1.5 1e-19 70.8 0.1 2.4 1 1 1 2 2 2 2 BTB/POZ domain DUF1925 PF09094.11 ORF117816 - 0.016 15.5 0.0 1.7 9.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1925) DUF4720 PF15846.5 ORF117816 - 0.16 11.9 0.2 1.1 9.1 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4720) VGPC1_C PF16799.5 ORF116798 - 0.012 15.6 1.4 0.039 13.9 1.4 1.9 1 0 0 1 1 1 0 C-terminal membrane-localisation domain of ion-channel, VCN1 Peptidase_A3 PF02160.15 ORF116798 - 0.16 11.4 3.9 0.24 10.9 3.9 1.2 1 0 0 1 1 1 0 Cauliflower mosaic virus peptidase (A3) TFIIA PF03153.13 ORF116798 - 0.21 11.6 13.8 0.31 11.0 13.8 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Exonuc_VII_L PF02601.15 ORF116798 - 3 7.3 9.8 4.8 6.6 9.8 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit bZIP_1 PF00170.21 ORF115118 - 6e-07 29.5 13.3 6e-07 29.5 13.3 3.1 3 0 0 3 3 3 1 bZIP transcription factor bZIP_2 PF07716.15 ORF115118 - 1.4e-06 28.2 13.4 1.4e-06 28.2 13.4 3.0 3 0 0 3 3 3 1 Basic region leucine zipper Peptidase_M76 PF09768.9 ORF115118 - 0.041 13.7 1.1 0.081 12.7 1.1 1.4 1 0 0 1 1 1 0 Peptidase M76 family CAP PF00188.26 ORF111183 - 1.8e-08 35.3 0.0 3.5e-08 34.3 0.0 1.5 1 0 0 1 1 1 1 Cysteine-rich secretory protein family Dicty_REP PF05086.12 ORF111183 - 9 4.1 8.1 12 3.8 8.1 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Pkinase PF00069.25 ORF110050 - 9.2e-63 212.1 1.2 1.1e-62 211.8 0.1 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF110050 - 8e-44 149.9 0.3 1.6e-43 148.9 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF110050 - 2e-09 37.2 0.0 6.1e-09 35.6 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF110050 - 2.3e-05 23.4 0.0 4.2e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF110050 - 0.0012 18.5 2.0 0.26 10.9 0.4 2.5 1 1 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF110050 - 0.0059 15.6 0.1 0.0059 15.6 0.1 2.1 2 1 0 2 2 2 1 Haspin like kinase domain Kdo PF06293.14 ORF110050 - 0.014 14.8 0.0 0.028 13.8 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF110050 - 0.022 14.4 0.1 0.052 13.1 0.1 1.6 1 0 0 1 1 1 0 RIO1 family Pkinase PF00069.25 ORF106061 - 9.2e-63 212.1 1.2 1.1e-62 211.8 0.1 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF106061 - 8e-44 149.9 0.3 1.6e-43 148.9 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF106061 - 2e-09 37.2 0.0 6.1e-09 35.6 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF106061 - 2.3e-05 23.4 0.0 4.2e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF106061 - 0.0012 18.5 2.0 0.26 10.9 0.4 2.5 1 1 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Haspin_kinase PF12330.8 ORF106061 - 0.0059 15.6 0.1 0.0059 15.6 0.1 2.1 2 1 0 2 2 2 1 Haspin like kinase domain Kdo PF06293.14 ORF106061 - 0.014 14.8 0.0 0.028 13.8 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF106061 - 0.022 14.4 0.1 0.052 13.1 0.1 1.6 1 0 0 1 1 1 0 RIO1 family Peptidase_C1 PF00112.23 ORF103063 - 8.6e-38 130.6 0.5 1.3e-37 130.0 0.5 1.2 1 0 0 1 1 1 1 Papain family cysteine protease WD40 PF00400.32 ORF100400 - 1.7e-12 47.6 19.9 0.0067 17.3 0.6 6.3 7 0 0 7 7 7 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF100400 - 2.7e-05 24.4 0.2 0.17 12.2 0.0 3.9 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Kelch_2 PF07646.15 ORF100400 - 0.024 14.6 0.1 3.7 7.7 0.0 3.2 2 0 0 2 2 2 0 Kelch motif Autophagy_C PF10381.9 NODE_15130_length_1144_cov_17.445446_g11310_i1reverse_frame_3 - 1.1 8.8 4.6 21 4.7 0.9 2.7 2 0 0 2 2 2 0 Autophagocytosis associated protein C-terminal SRTM1 PF15872.5 ORF99733 - 0.46 10.6 1.7 18 5.5 0.1 2.7 2 0 0 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 Pkinase PF00069.25 ORF99260 - 8.1e-50 169.6 0.0 1.1e-49 169.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF99260 - 2.2e-25 89.4 0.0 3.9e-24 85.3 0.0 2.1 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF99260 - 0.00022 20.7 0.0 0.00059 19.2 0.0 1.6 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF99260 - 0.02 13.9 0.0 0.028 13.4 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain VHL_C PF17211.3 ORF99260 - 0.15 12.1 0.1 0.41 10.7 0.1 1.8 1 0 0 1 1 1 0 VHL box domain RTC PF01137.21 ORF87066 - 1.4e-56 191.2 0.0 1.8e-56 190.8 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase Asp PF00026.23 ORF82853 - 3.4e-82 276.4 6.7 4.2e-82 276.1 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF82853 - 4.3e-11 43.4 3.2 2.9e-09 37.4 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF82853 - 9.2e-06 25.5 0.0 2.8e-05 23.9 0.0 1.8 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Oxysterol_BP PF01237.18 ORF74702 - 1.8e-37 129.1 5.4 8.1e-33 113.8 0.7 2.1 1 1 1 2 2 2 2 Oxysterol-binding protein DUF4809 PF16067.5 ORF74702 - 0.026 14.7 0.0 0.056 13.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4809) Glyco_transf_4 PF13439.6 ORF68530 - 3.2e-11 43.5 1.2 3.5e-11 43.4 0.1 1.6 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 ORF68530 - 4.1e-09 37.1 0.7 4.1e-09 37.1 0.7 2.2 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 ORF68530 - 5.9e-07 29.6 0.0 9.9e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like BATS PF06968.13 ORF6442 - 3.5e-21 75.1 0.0 7.3e-21 74.1 0.0 1.6 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 ORF6442 - 2.2e-09 37.9 0.0 4e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily PgdA_N PF18627.1 ORF62194 - 0.042 13.5 1.3 0.08 12.6 1.3 1.4 1 0 0 1 1 1 0 Peptidoglycan GlcNAc deacetylase N-terminal domain URO-D PF01208.17 ORF57312 - 2.5e-115 385.3 0.0 2.8e-115 385.2 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) zf-CCHC_3 PF13917.6 ORF57312 - 0.0056 16.6 0.6 0.012 15.6 0.6 1.4 1 0 0 1 1 1 1 Zinc knuckle Peripla_BP_3 PF13377.6 ORF56562 - 0.0025 18.2 0.1 0.038 14.3 0.0 2.6 3 0 0 3 3 3 1 Periplasmic binding protein-like domain Cluap1 PF10234.9 ORF54396 - 4.1e-99 331.3 7.3 4.1e-99 331.3 7.3 1.5 1 1 1 2 2 2 1 Clusterin-associated protein-1 Lebercilin PF15619.6 ORF54396 - 0.0033 17.1 16.9 0.0033 17.1 16.9 1.8 1 1 1 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease SesA PF17107.5 ORF54396 - 0.018 15.2 0.8 0.018 15.2 0.8 2.2 2 1 0 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Prominin PF05478.11 ORF54396 - 0.11 10.4 7.4 0.17 9.9 7.4 1.3 1 0 0 1 1 1 0 Prominin DUF745 PF05335.13 ORF54396 - 1 9.1 4.7 0.89 9.3 2.3 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 ORF54396 - 3 7.9 8.1 0.58 10.2 1.8 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Fzo_mitofusin PF04799.13 ORF54396 - 3.7 7.1 7.1 0.24 10.9 1.4 1.9 2 0 0 2 2 2 0 fzo-like conserved region Exonuc_VII_L PF02601.15 ORF54396 - 7.2 6.1 11.8 14 5.1 11.8 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit Plant_zn_clust PF10533.9 ORF49934 - 2.3 8.3 8.1 7.5 6.6 1.5 3.1 2 0 0 2 2 2 0 Plant zinc cluster domain TMEM65 PF10507.9 ORF47879 - 4.8e-40 135.9 4.8 4.8e-40 135.9 4.8 1.7 2 0 0 2 2 2 1 Transmembrane protein 65 GAF PF01590.26 ORF47879 - 6.4e-09 36.5 0.0 3e-08 34.4 0.0 2.0 1 1 0 1 1 1 1 GAF domain GAF_2 PF13185.6 ORF47879 - 0.0021 18.4 0.0 0.0039 17.5 0.0 1.6 1 0 0 1 1 1 1 GAF domain C_GCAxxG_C_C PF09719.10 ORF47879 - 0.14 12.5 1.1 0.53 10.6 0.6 2.2 1 1 1 2 2 2 0 Putative redox-active protein (C_GCAxxG_C_C) BTB PF00651.31 ORF44990 - 8.7e-21 74.2 3.8 9.3e-20 70.9 0.6 2.6 1 1 1 2 2 2 2 BTB/POZ domain cNMP_binding PF00027.29 ORF3869 - 0.00056 19.9 0.1 0.021 14.9 0.1 2.9 2 1 1 3 3 3 1 Cyclic nucleotide-binding domain Ish1 PF10281.9 ORF35134 - 0.02 15.2 0.3 0.08 13.3 0.0 2.1 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein Armet PF10208.9 ORF35134 - 0.048 13.6 0.0 0.078 12.9 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding Ank_2 PF12796.7 ORF34144 - 1.2e-14 54.7 0.0 1.9e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF34144 - 4.4e-13 48.1 0.0 2.4e-05 24.4 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF34144 - 2.2e-12 47.2 0.0 1.9e-06 28.3 0.0 2.6 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF34144 - 3.7e-12 46.2 0.0 3.1e-05 24.2 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_1 PF00583.25 ORF34144 - 2.7e-10 40.5 0.0 7.3e-10 39.1 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF34144 - 1.1e-08 35.1 0.0 2e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ank PF00023.30 ORF34144 - 2.2e-08 34.2 0.0 0.0041 17.5 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_7 PF13508.7 ORF34144 - 7.8e-06 26.2 0.0 1.9e-05 25.0 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF34144 - 0.00013 21.9 0.0 0.00031 20.7 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 ORF34144 - 0.0062 16.6 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Ly49 PF08391.10 ORF34073 - 0.0012 19.2 9.0 0.0012 19.2 9.0 4.1 1 1 4 5 5 5 1 Ly49-like protein, N-terminal region T2SSF PF00482.23 ORF34073 - 0.0057 16.6 0.5 0.029 14.3 0.5 2.2 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein F IQ PF00612.27 ORF34073 - 0.03 14.1 0.8 0.062 13.1 0.8 1.6 1 0 0 1 1 1 0 IQ calmodulin-binding motif Fibrillarin PF01269.17 ORF2664 - 0.0075 15.4 0.0 0.049 12.7 0.0 1.9 2 0 0 2 2 2 1 Fibrillarin Methyltransf_24 PF13578.6 ORF2664 - 0.069 14.2 0.0 0.15 13.1 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain Pyr_redox_2 PF07992.14 ORF24115 - 0.014 14.7 0.0 0.019 14.2 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF1302 PF06980.11 ORF24115 - 0.078 11.6 0.0 0.11 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1302) PH PF00169.29 ORF22740 - 0.00099 19.6 0.5 0.00099 19.6 0.5 3.0 3 1 0 3 3 3 1 PH domain PH_9 PF15410.6 ORF22740 - 0.17 12.2 4.2 0.4 11.1 0.1 3.1 2 1 1 3 3 3 0 Pleckstrin homology domain ZapA PF05164.13 ORF22740 - 0.34 11.4 0.0 0.34 11.4 0.0 2.5 4 0 0 4 4 4 0 Cell division protein ZapA Ank_2 PF12796.7 ORF22307 - 1.3e-29 102.6 0.1 1.2e-09 38.7 0.0 4.0 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF22307 - 3.5e-21 75.3 2.0 6.8e-05 23.3 0.0 5.6 4 2 1 6 6 6 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF22307 - 7.9e-15 54.7 9.6 0.016 15.5 0.0 6.6 5 3 2 7 7 7 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF22307 - 2.4e-14 52.0 4.0 0.25 12.0 0.0 7.5 8 0 0 8 8 8 5 Ankyrin repeat Ank PF00023.30 ORF22307 - 4.8e-13 48.9 16.5 0.23 12.0 0.1 7.3 6 1 1 7 7 7 6 Ankyrin repeat ubiquitin PF00240.23 ORF22307 - 5.5e-06 26.0 0.0 9.4e-06 25.3 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family PolyA_pol_RNAbd PF12627.7 ORF2149 - 1.7e-16 59.7 0.1 4.7e-16 58.3 0.1 1.8 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A HD PF01966.22 ORF2149 - 7.4e-13 48.8 0.1 5.6e-12 45.9 0.0 2.1 2 0 0 2 2 2 1 HD domain PolyA_pol PF01743.20 ORF2149 - 5.2e-11 43.1 0.0 1.1e-10 42.0 0.0 1.6 1 0 0 1 1 1 1 Poly A polymerase head domain PgdA_N PF18627.1 ORF20987 - 0.042 13.5 1.3 0.08 12.6 1.3 1.4 1 0 0 1 1 1 0 Peptidoglycan GlcNAc deacetylase N-terminal domain Ish1 PF10281.9 ORF19497 - 0.02 15.2 0.3 0.08 13.3 0.0 2.1 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein Armet PF10208.9 ORF19497 - 0.048 13.6 0.0 0.078 12.9 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding DUF4577 PF15145.6 ORF16460 - 0.56 10.3 2.7 4.7 7.3 0.1 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4577) Pkinase PF00069.25 ORF139093 - 6.9e-64 215.7 0.1 8.3e-64 215.5 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF139093 - 3.6e-22 78.9 0.0 4.8e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF139093 - 7.3e-08 32.6 0.0 2.2e-05 24.5 0.2 2.6 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 ORF139093 - 0.0043 16.4 0.0 0.0068 15.8 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF139093 - 0.0051 15.6 0.1 0.015 14.1 0.0 1.7 2 0 0 2 2 2 1 Fungal protein kinase Choline_kinase PF01633.20 ORF139093 - 0.07 12.7 0.3 0.13 11.9 0.3 1.4 1 0 0 1 1 1 0 Choline/ethanolamine kinase Cluap1 PF10234.9 ORF13724 - 4.1e-99 331.3 7.3 4.1e-99 331.3 7.3 1.5 1 1 1 2 2 2 1 Clusterin-associated protein-1 Lebercilin PF15619.6 ORF13724 - 0.0033 17.1 16.9 0.0033 17.1 16.9 1.8 1 1 1 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease SesA PF17107.5 ORF13724 - 0.018 15.2 0.8 0.018 15.2 0.8 2.2 2 1 0 2 2 2 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Prominin PF05478.11 ORF13724 - 0.11 10.4 7.4 0.17 9.9 7.4 1.3 1 0 0 1 1 1 0 Prominin DUF745 PF05335.13 ORF13724 - 1 9.1 4.7 0.89 9.3 2.3 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 ORF13724 - 3 7.9 8.1 0.58 10.2 1.8 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Fzo_mitofusin PF04799.13 ORF13724 - 3.7 7.1 7.1 0.24 10.9 1.4 1.9 2 0 0 2 2 2 0 fzo-like conserved region Exonuc_VII_L PF02601.15 ORF13724 - 7.2 6.1 11.8 14 5.1 11.8 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit Aa_trans PF01490.18 ORF124955 - 2e-35 122.3 2.9 2.6e-35 121.9 2.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Kinase-PPPase PF03618.14 ORF122844 - 1e-69 235.2 0.0 1.2e-69 234.9 0.0 1.1 1 0 0 1 1 1 1 Kinase/pyrophosphorylase AAA_18 PF13238.6 ORF122844 - 0.049 14.2 0.0 0.12 12.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain Ank_2 PF12796.7 ORF120450 - 1.1e-14 54.8 0.0 1.9e-14 54.0 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF120450 - 4e-13 48.2 0.0 2.4e-05 24.4 0.0 3.6 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF120450 - 2.4e-12 47.1 0.0 1.9e-06 28.3 0.0 2.6 1 1 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF120450 - 3.7e-12 46.2 0.0 3.1e-05 24.2 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Acetyltransf_1 PF00583.25 ORF120450 - 2.9e-10 40.4 0.0 7.6e-10 39.0 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Ank PF00023.30 ORF120450 - 2.1e-08 34.2 0.0 0.0041 17.5 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Acetyltransf_10 PF13673.7 ORF120450 - 9e-08 32.1 0.0 1.7e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF120450 - 0.00038 20.4 0.0 0.00098 19.0 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 ORF120450 - 0.00058 20.2 0.0 0.0015 18.9 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF120450 - 0.048 13.8 0.0 0.09 12.9 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Chloroa_b-bind PF00504.21 ORF11348 - 2.2e-71 239.6 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF11348 - 0.0029 17.9 0.0 7.2 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF11348 - 0.0048 17.2 0.0 6.1 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF11348 - 0.011 15.7 0.0 8.1 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF11348 - 0.035 14.1 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF11348 - 0.19 12.0 0.0 35 4.8 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Arrestin_C PF02752.22 ORF100338 - 7.1e-16 58.9 0.5 3.1e-11 43.9 0.0 2.2 2 0 0 2 2 2 2 Arrestin (or S-antigen), C-terminal domain Arrestin_N PF00339.29 ORF100338 - 5.1e-14 52.6 0.6 6.4e-13 49.0 0.1 2.4 3 0 0 3 3 3 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 ORF100338 - 0.0074 16.0 0.0 0.018 14.8 0.0 1.6 1 0 0 1 1 1 1 Arrestin_N terminal like MG2 PF01835.19 NODE_15233_length_1139_cov_135.451993_g243_i2reverse_frame_1 - 0.00012 22.5 0.1 0.001 19.5 0.0 2.4 2 1 0 2 2 2 1 MG2 domain Arrestin_C PF02752.22 NODE_15233_length_1139_cov_135.451993_g243_i2reverse_frame_1 - 0.017 15.6 1.5 0.025 15.1 0.3 1.9 2 0 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain zf-C2H2_jaz PF12171.8 NODE_15233_length_1139_cov_135.451993_g243_i2forward_frame_1 - 0.13 12.6 1.0 0.27 11.6 1.0 1.6 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding zf-RING_11 PF17123.5 ORF95931 - 7.4e-05 22.4 7.0 7.4e-05 22.4 7.0 3.2 3 0 0 3 3 3 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF95931 - 0.00032 21.0 17.2 0.00032 21.0 17.2 2.6 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF95931 - 0.00076 19.5 11.3 0.00076 19.5 11.3 2.1 2 0 0 2 2 2 1 RING-type zinc-finger HemY_N PF07219.13 ORF95931 - 0.0019 18.4 0.0 0.0034 17.6 0.0 1.3 1 0 0 1 1 1 1 HemY protein N-terminus Cadherin_C_2 PF16492.5 ORF95931 - 0.018 15.8 0.2 0.018 15.8 0.2 2.1 2 0 0 2 2 2 0 Cadherin cytoplasmic C-terminal Comm PF15957.5 ORF95931 - 0.06 13.7 0.0 0.13 12.6 0.0 1.6 1 0 0 1 1 1 0 Commissureless zf-rbx1 PF12678.7 ORF95931 - 2.2 8.6 20.7 0.15 12.3 12.8 2.6 2 0 0 2 2 2 0 RING-H2 zinc finger domain MFS_1 PF07690.16 ORF95314 - 8.6e-32 110.4 41.2 3.9e-23 81.9 25.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF95314 - 9.1e-10 38.0 18.9 6.3e-09 35.2 3.4 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 ORF95314 - 0.076 11.4 20.5 0.02 13.3 13.1 2.0 1 1 1 2 2 2 0 Transmembrane secretion effector LacY_symp PF01306.19 ORF95314 - 0.69 8.6 12.2 2.2 7.0 3.7 2.2 1 1 1 2 2 2 0 LacY proton/sugar symporter SpoVAB PF13782.6 ORF95314 - 0.97 9.8 0.0 0.97 9.8 0.0 3.6 4 1 0 4 4 4 0 Stage V sporulation protein AB TTL PF03133.15 ORF90301 - 2.4e-17 63.0 0.0 2.4e-17 63.0 0.0 2.3 2 1 0 2 2 2 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF90301 - 3.6e-05 23.2 0.0 8e-05 22.0 0.0 1.6 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF90301 - 0.026 13.8 0.0 0.05 12.8 0.0 1.4 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp EamA PF00892.20 ORF86524 - 8.7e-08 32.4 35.7 0.00017 21.8 18.7 2.2 2 0 0 2 2 2 2 EamA-like transporter family Peptidase_C48 PF02902.19 ORF8633 - 9.1e-42 143.3 0.2 1.1e-41 143.0 0.2 1.1 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Pkinase PF00069.25 ORF85305 - 1.1e-60 205.2 0.2 1.7e-60 204.6 0.2 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85305 - 2.9e-32 112.0 0.0 4.1e-32 111.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF85305 - 9e-05 21.6 2.3 0.00014 20.9 2.3 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF85305 - 0.00026 20.4 0.7 0.00042 19.7 0.7 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF85305 - 0.0053 16.4 0.1 0.0086 15.7 0.1 1.3 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF85305 - 0.007 16.3 0.1 0.061 13.2 0.0 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family DUF2838 PF10998.8 ORF82719 - 4e-16 59.2 18.0 4e-16 59.2 18.0 3.1 2 1 1 3 3 3 1 Protein of unknown function (DUF2838) RteC PF09357.10 ORF80107 - 0.003 17.3 0.1 0.0052 16.5 0.1 1.3 1 0 0 1 1 1 1 RteC protein PXPV PF12778.7 ORF80107 - 0.014 15.3 0.5 0.014 15.3 0.5 3.0 3 0 0 3 3 3 0 PXPV repeat (3 copies) Rrn6 PF10214.9 ORF80107 - 0.092 11.2 1.5 0.11 10.9 1.5 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Hydrolase PF00702.26 ORF77832 - 1e-06 29.2 0.1 1.6e-06 28.6 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.21 ORF77832 - 4.9e-05 23.1 10.1 8.1e-05 22.4 10.1 1.3 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus KGK PF08872.10 ORF77832 - 0.029 14.9 0.0 0.061 13.8 0.0 1.5 1 0 0 1 1 1 0 KGK domain Hydrolase_3 PF08282.12 ORF77832 - 0.04 13.6 0.1 0.062 13.0 0.1 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Tubulin PF00091.25 ORF74542 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF74542 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF74542 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF74542 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Pox_A30L_A26L PF06086.12 ORF72726 - 0.032 13.9 0.7 0.84 9.3 0.7 2.2 2 0 0 2 2 2 0 Orthopoxvirus A26L/A30L protein Tubulin PF00091.25 ORF72703 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF72703 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF72703 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF72703 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Tubulin PF00091.25 ORF70527 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF70527 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF70527 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF70527 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like Pox_A30L_A26L PF06086.12 ORF69493 - 0.033 13.9 0.7 0.84 9.3 0.7 2.2 2 0 0 2 2 2 0 Orthopoxvirus A26L/A30L protein AAA PF00004.29 ORF69265 - 3.9e-43 147.0 0.0 8.2e-43 146.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF69265 - 6.6e-12 45.0 0.1 1.4e-11 44.0 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 ORF69265 - 4.4e-10 39.4 0.1 9.9e-10 38.2 0.1 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_2 PF07724.14 ORF69265 - 5.7e-07 29.8 0.4 1.6e-06 28.4 0.0 1.9 2 1 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 ORF69265 - 2.9e-06 27.8 0.8 0.00017 22.0 0.0 3.1 2 1 1 4 4 3 1 AAA ATPase domain AAA_5 PF07728.14 ORF69265 - 3e-06 27.3 0.3 1.5e-05 25.0 0.0 2.3 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF69265 - 6e-05 22.8 0.0 0.00016 21.4 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF69265 - 6e-05 23.3 0.5 0.015 15.6 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF69265 - 0.00088 19.4 1.2 0.0016 18.6 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF69265 - 0.0012 19.4 0.1 0.0069 16.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 ORF69265 - 0.0013 18.1 0.3 0.0032 16.7 0.0 1.8 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_13 PF13166.6 ORF69265 - 0.0024 16.6 1.1 0.16 10.6 1.9 2.1 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF69265 - 0.0033 17.2 0.0 0.007 16.1 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein ATPase PF06745.13 ORF69265 - 0.0037 16.6 1.3 0.018 14.4 0.0 2.5 3 0 0 3 3 3 1 KaiC Mg_chelatase PF01078.21 ORF69265 - 0.0051 16.2 0.2 0.018 14.4 0.1 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI PhoH PF02562.16 ORF69265 - 0.0068 15.9 0.1 0.15 11.5 0.0 2.4 2 0 0 2 2 2 1 PhoH-like protein DUF2072 PF09845.9 ORF69265 - 0.0082 16.4 1.6 0.015 15.6 1.6 1.5 1 0 0 1 1 1 1 Zn-ribbon containing protein AAA_28 PF13521.6 ORF69265 - 0.012 15.8 0.7 0.03 14.6 0.0 2.0 2 1 1 3 3 1 0 AAA domain AAA_3 PF07726.11 ORF69265 - 0.013 15.3 0.0 0.034 14.0 0.0 1.8 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 ORF69265 - 0.014 15.1 0.1 0.15 11.8 0.0 2.4 1 1 0 2 2 2 0 Sigma-54 interaction domain RNA_helicase PF00910.22 ORF69265 - 0.014 15.7 0.0 0.027 14.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_24 PF13479.6 ORF69265 - 0.02 14.6 0.0 0.05 13.3 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 ORF69265 - 0.025 14.4 0.7 0.39 10.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 ORF69265 - 0.03 13.9 0.0 0.053 13.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 ORF69265 - 0.034 14.1 0.0 0.072 13.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 ORF69265 - 0.042 13.8 0.0 0.69 9.8 0.0 2.2 1 1 1 2 2 2 0 NACHT domain Parvo_NS1 PF01057.17 ORF69265 - 0.052 12.6 0.6 0.084 11.9 0.0 1.5 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 ORF69265 - 0.055 13.0 0.4 0.17 11.5 0.0 1.9 2 0 0 2 2 1 0 AAA domain DUF815 PF05673.13 ORF69265 - 0.057 12.6 0.0 0.13 11.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_14 PF13173.6 ORF69265 - 0.068 13.2 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain Spc7 PF08317.11 ORF69265 - 0.088 11.7 2.2 0.21 10.5 2.2 1.6 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4763 PF15960.5 ORF69265 - 0.094 12.0 2.4 0.22 10.8 2.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) DivIC PF04977.15 ORF69265 - 0.13 12.1 5.0 0.095 12.5 3.0 1.8 2 0 0 2 2 1 0 Septum formation initiator DUF4140 PF13600.6 ORF69265 - 0.49 10.9 2.5 1.4 9.4 2.5 1.7 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) APG6_N PF17675.1 ORF69265 - 0.51 10.9 5.0 1.3 9.6 5.0 1.6 1 0 0 1 1 1 0 Apg6 coiled-coil region AAA_23 PF13476.6 ORF69265 - 0.81 10.1 3.1 73 3.8 3.2 2.5 2 0 0 2 2 2 0 AAA domain DUF3450 PF11932.8 ORF69265 - 1.6 8.0 5.2 1.1 8.4 1.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Fe-ADH PF00465.19 ORF6705 - 7.2e-64 215.9 6.4 8.2e-64 215.7 6.4 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 ORF6705 - 2.4e-30 106.0 0.1 3.2e-30 105.6 0.1 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 ORF6705 - 0.036 13.2 4.7 1.3 8.2 4.6 2.7 1 1 0 1 1 1 0 3-dehydroquinate synthase Prok-E2_A PF14457.6 ORF53712 - 0.0013 18.4 9.4 2.7 7.6 0.1 3.6 4 0 0 4 4 4 3 Prokaryotic E2 family A Glft2_N PF17994.1 ORF53712 - 0.0076 16.2 11.4 6.4 6.7 0.1 4.2 4 0 0 4 4 4 3 Galactofuranosyltransferase 2 N-terminal RNB PF00773.19 ORF53712 - 0.017 14.5 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 RNB domain Cys_Knot_tox PF17486.2 ORF53712 - 0.21 11.8 17.6 7.9 6.8 0.8 4.4 4 0 0 4 4 4 0 Cystine knot toxins Prok-E2_A PF14457.6 ORF5193 - 0.0013 18.4 9.4 2.7 7.6 0.1 3.6 4 0 0 4 4 4 3 Prokaryotic E2 family A Glft2_N PF17994.1 ORF5193 - 0.0076 16.2 11.4 6.4 6.7 0.1 4.2 4 0 0 4 4 4 3 Galactofuranosyltransferase 2 N-terminal RNB PF00773.19 ORF5193 - 0.017 14.5 0.0 0.023 14.0 0.0 1.1 1 0 0 1 1 1 0 RNB domain Cys_Knot_tox PF17486.2 ORF5193 - 0.21 11.8 17.6 7.9 6.8 0.8 4.4 4 0 0 4 4 4 0 Cystine knot toxins COPIIcoated_ERV PF07970.12 ORF46249 - 0.044 13.6 0.2 0.044 13.6 0.2 2.1 3 0 0 3 3 3 0 Endoplasmic reticulum vesicle transporter Indigoidine_A PF04227.12 ORF46249 - 0.061 12.7 0.4 0.15 11.4 0.4 1.6 1 0 0 1 1 1 0 Indigoidine synthase A like protein Hema_stalk PF08720.10 ORF46249 - 0.24 11.1 4.1 0.097 12.4 0.3 2.2 2 1 0 2 2 2 0 Influenza C hemagglutinin stalk Lant_dehydr_C PF14028.6 ORF46249 - 0.69 9.4 7.1 0.21 11.1 2.8 2.1 2 0 0 2 2 2 0 Lantibiotic biosynthesis dehydratase C-term Peptidase_C50 PF03568.17 ORF46249 - 0.78 8.8 30.1 0.0055 15.9 14.7 2.2 1 1 1 2 2 2 0 Peptidase family C50 SPC25 PF06703.11 ORF45094 - 0.26 11.1 1.2 0.9 9.3 0.0 2.2 2 0 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF2838 PF10998.8 ORF43712 - 6.6e-13 48.9 13.3 6.6e-13 48.9 13.3 3.1 2 1 0 2 2 2 1 Protein of unknown function (DUF2838) Abhydro_lipase PF04083.16 ORF40855 - 2.5e-18 65.4 0.0 4.7e-18 64.5 0.0 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 ORF40855 - 1.6e-06 28.0 0.0 1.7e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold ACT_5 PF13710.6 ORF39686 - 0.095 12.6 1.5 4.6 7.2 0.1 3.2 2 1 0 2 2 2 0 ACT domain zinc-ribbon_6 PF10005.9 ORF39600 - 9.2e-12 45.5 14.9 0.0099 16.5 0.4 4.3 4 0 0 4 4 4 4 zinc-ribbon domain zf-RanBP PF00641.18 ORF39600 - 3.1e-11 42.4 38.7 0.00014 21.1 2.3 4.9 5 0 0 5 5 5 4 Zn-finger in Ran binding protein and others zf-ribbon_3 PF13248.6 ORF39600 - 0.00023 20.5 31.7 0.17 11.3 3.8 6.4 6 0 0 6 6 6 3 zinc-ribbon domain DZR PF12773.7 ORF39600 - 0.00068 19.6 34.4 0.025 14.6 11.1 3.5 2 2 1 3 3 3 2 Double zinc ribbon RNA_POL_M_15KD PF02150.16 ORF39600 - 0.0035 17.2 31.2 0.53 10.2 1.2 5.8 4 2 1 5 5 5 4 RNA polymerases M/15 Kd subunit zinc_ribbon_15 PF17032.5 ORF39600 - 0.084 13.6 21.7 3.3 8.5 7.8 3.8 2 2 1 3 3 3 0 zinc-ribbon family zinc_ribbon_10 PF10058.9 ORF39600 - 0.13 12.0 6.4 17 5.3 0.0 4.8 5 0 0 5 5 5 0 Predicted integral membrane zinc-ribbon metal-binding protein TackOD1 PF18551.1 ORF39600 - 0.52 9.9 17.1 7.2 6.2 0.3 4.1 3 1 0 4 4 4 0 Thaumarchaeal output domain 1 DUF1451 PF07295.11 ORF39600 - 1.9 8.5 18.9 1.6 8.8 0.1 4.4 4 0 0 4 4 4 0 Zinc-ribbon containing domain C2-set_2 PF08205.12 ORF39258 - 0.026 14.6 0.0 0.051 13.6 0.0 1.4 1 0 0 1 1 1 0 CD80-like C2-set immunoglobulin domain OmpH PF03938.14 ORF35403 - 0.0009 19.6 16.5 0.0009 19.6 16.5 2.1 2 0 0 2 2 2 1 Outer membrane protein (OmpH-like) Exonuc_VII_L PF02601.15 ORF35403 - 0.0064 16.1 5.2 0.0064 16.1 5.2 1.7 2 0 0 2 2 2 1 Exonuclease VII, large subunit Baculo_PEP_C PF04513.12 ORF35403 - 0.0068 16.5 2.1 0.074 13.1 0.0 2.3 1 1 1 2 2 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus Fzo_mitofusin PF04799.13 ORF35403 - 0.047 13.3 0.3 0.047 13.3 0.3 2.3 2 0 0 2 2 2 0 fzo-like conserved region Tweety PF04906.13 ORF35403 - 0.075 11.7 0.6 0.12 11.1 0.6 1.2 1 0 0 1 1 1 0 Tweety USP8_interact PF08941.10 ORF35403 - 0.084 12.7 3.3 0.17 11.7 3.3 1.5 1 0 0 1 1 1 0 USP8 interacting Antimicrobial12 PF08107.11 ORF35403 - 0.35 10.6 1.8 7.9 6.3 0.9 2.3 2 0 0 2 2 2 0 Pleurocidin family DUF737 PF05300.11 ORF35403 - 0.38 11.1 17.8 0.057 13.8 13.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF737) ALMT PF11744.8 ORF35403 - 0.44 9.3 6.4 0.69 8.7 6.4 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter Apolipoprotein PF01442.18 ORF35403 - 0.96 9.3 10.9 5.3 6.9 10.9 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF948 PF06103.11 ORF35403 - 1.5 9.1 7.5 2.3 8.5 0.1 2.9 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) I_LWEQ PF01608.17 ORF35403 - 1.7 8.9 8.8 3.7 7.8 8.8 1.6 1 0 0 1 1 1 0 I/LWEQ domain Syntaxin-6_N PF09177.11 ORF35403 - 3.3 8.3 13.0 6.6 7.4 6.3 3.0 2 1 1 3 3 2 0 Syntaxin 6, N-terminal LMBR1 PF04791.16 ORF35403 - 3.5 6.4 10.5 5.9 5.7 7.1 2.2 2 0 0 2 2 2 0 LMBR1-like membrane protein DUF1664 PF07889.12 ORF35403 - 3.6 7.6 10.9 2.1e+02 1.9 10.8 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF1451 PF07295.11 ORF35403 - 8.5 6.4 11.6 1.5 8.9 7.5 1.8 2 0 0 2 2 2 0 Zinc-ribbon containing domain Tubulin PF00091.25 ORF2840 - 7.8e-50 169.8 0.0 2.2e-49 168.4 0.0 1.7 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF2840 - 3.7e-42 143.5 0.2 5.5e-42 142.9 0.2 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_2 PF13809.6 ORF2840 - 0.0022 17.3 0.1 0.0067 15.7 0.0 1.8 2 0 0 2 2 2 1 Tubulin like Tubulin_3 PF14881.6 ORF2840 - 0.0045 16.7 0.0 0.0079 15.9 0.0 1.4 1 0 0 1 1 1 1 Tubulin domain ACT_5 PF13710.6 ORF24436 - 0.095 12.6 1.5 4.6 7.2 0.1 3.2 2 1 0 2 2 2 0 ACT domain Torus PF16131.5 ORF23230 - 7.4e-13 49.1 9.6 1.6e-06 28.8 1.3 3.1 2 1 1 3 3 3 2 Torus domain zf_CCCH_4 PF18345.1 ORF23230 - 4e-10 39.4 25.5 9.3e-06 25.5 4.2 3.7 4 0 0 4 4 4 2 Zinc finger domain zf-CCCH PF00642.24 ORF23230 - 5.4e-09 35.8 15.6 6.3e-05 22.8 1.4 3.5 3 0 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-C2H2_2 PF12756.7 ORF23230 - 1.5e-08 34.9 19.3 0.00024 21.4 0.1 4.3 3 1 1 4 4 4 3 C2H2 type zinc-finger (2 copies) zf-CCCH_4 PF18044.1 ORF23230 - 5.3e-08 32.5 7.7 2.4e-05 24.0 0.7 3.9 4 0 0 4 4 3 2 CCCH-type zinc finger zf-C2H2_jaz PF12171.8 ORF23230 - 3.6e-07 30.3 17.0 0.016 15.5 0.0 4.6 4 0 0 4 4 4 3 Zinc-finger double-stranded RNA-binding zf-CCCH_2 PF14608.6 ORF23230 - 9.1e-07 29.1 9.8 0.0061 17.0 1.8 3.0 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger zf-C2H2_6 PF13912.6 ORF23230 - 0.0001 22.2 14.3 0.0022 17.9 0.0 4.2 4 0 0 4 4 4 1 C2H2-type zinc finger zf-C2H2_4 PF13894.6 ORF23230 - 0.0015 19.2 30.2 0.0049 17.6 0.0 6.0 6 1 0 6 6 4 3 C2H2-type zinc finger zf-met PF12874.7 ORF23230 - 0.002 18.4 15.6 0.34 11.4 0.1 4.1 4 0 0 4 4 3 2 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 ORF23230 - 0.0032 17.8 0.1 0.0032 17.8 0.1 6.6 6 1 0 6 6 6 2 Zinc finger, C2H2 type zf-B_box PF00643.24 ORF23230 - 0.0056 16.8 3.8 0.0056 16.8 3.8 3.8 5 0 0 5 5 4 1 B-box zinc finger DUF629 PF04780.12 ORF23230 - 0.12 10.8 11.7 0.23 9.9 0.1 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF629) PRP21_like_P PF12230.8 ORF23230 - 0.17 11.8 2.8 7.7 6.3 0.3 2.4 1 1 1 2 2 2 0 Pre-mRNA splicing factor PRP21 like protein zf-C2H2_11 PF16622.5 ORF23230 - 1.7 8.4 7.3 12 5.8 0.2 3.7 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-CCCH_3 PF15663.5 ORF23230 - 4.6 7.5 18.3 2.3 8.4 8.6 3.5 2 2 1 3 3 3 0 Zinc-finger containing family DUF1664 PF07889.12 ORF18969 - 0.28 11.2 2.9 15 5.6 1.5 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Fez1 PF06818.15 ORF18969 - 0.32 11.4 6.8 1.4 9.3 6.8 2.0 1 1 0 1 1 1 0 Fez1 MbeD_MobD PF04899.12 ORF18969 - 0.34 11.0 5.0 4.6 7.4 0.4 2.6 2 0 0 2 2 2 0 MbeD/MobD like DUF745 PF05335.13 ORF18969 - 5.1 6.8 7.9 4.4 7.0 3.9 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF745) CRA PF06589.11 ORF138540 - 0.0085 16.2 6.8 0.023 14.8 6.8 1.7 1 0 0 1 1 1 1 Circumsporozoite-related antigen (CRA) TMEM51 PF15345.6 ORF138540 - 0.017 15.0 0.2 0.017 15.0 0.2 1.9 2 0 0 2 2 2 0 Transmembrane protein 51 PA26 PF04636.13 ORF138540 - 0.04 12.8 0.1 0.053 12.5 0.1 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) FAM176 PF14851.6 ORF138540 - 0.054 13.1 0.4 0.054 13.1 0.4 1.6 2 0 0 2 2 2 0 FAM176 family CPSF100_C PF13299.6 ORF138540 - 0.066 13.4 1.5 0.11 12.7 1.5 1.3 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal MMM1 PF10296.9 ORF138540 - 0.089 11.8 0.9 0.12 11.4 0.2 1.5 2 0 0 2 2 2 0 Maintenance of mitochondrial morphology protein 1 NPR3 PF03666.13 ORF138540 - 0.27 10.0 2.8 0.35 9.6 2.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 OAD_gamma PF04277.13 ORF138540 - 0.31 11.7 0.1 0.31 11.7 0.1 3.2 3 0 0 3 3 2 0 Oxaloacetate decarboxylase, gamma chain Serinc PF03348.15 ORF138540 - 0.5 9.2 6.3 4.5 6.1 0.0 2.1 2 0 0 2 2 2 0 Serine incorporator (Serinc) Ac76 PF05814.11 ORF138540 - 0.51 10.4 0.0 0.51 10.4 0.0 2.4 2 0 0 2 2 1 0 Orf76 (Ac76) SHR3_chaperone PF08229.11 ORF138540 - 2.2 7.2 9.7 43 3.0 9.7 2.2 1 1 0 1 1 1 0 ER membrane protein SH3 OST3_OST6 PF04756.13 ORF138540 - 6.3 6.1 8.2 12 5.1 8.2 1.4 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family zf-C2HC_2 PF13913.6 ORF136685 - 1.1e-18 66.6 6.0 1.8e-09 37.3 0.8 2.3 2 0 0 2 2 2 2 zinc-finger of a C2HC-type zf-C2H2 PF00096.26 ORF136685 - 0.0001 22.5 9.8 0.0085 16.5 0.1 3.6 2 2 2 4 4 4 2 Zinc finger, C2H2 type zf-RING_7 PF02591.15 ORF136685 - 0.0002 21.4 0.9 0.16 12.2 0.0 2.4 2 0 0 2 2 2 2 C4-type zinc ribbon domain zf-C2H2_4 PF13894.6 ORF136685 - 0.00032 21.3 7.7 0.31 12.0 0.3 3.3 2 2 2 4 4 3 2 C2H2-type zinc finger zf-ACC PF17848.1 ORF136685 - 0.00042 20.3 2.4 0.12 12.5 0.1 2.3 2 0 0 2 2 2 2 Acetyl-coA carboxylase zinc finger domain zf-ribbon_3 PF13248.6 ORF136685 - 0.0046 16.3 2.4 0.075 12.5 0.1 2.5 2 0 0 2 2 2 1 zinc-ribbon domain zf_UBZ PF18439.1 ORF136685 - 0.005 16.4 0.8 0.98 9.1 0.0 2.7 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 ORF136685 - 0.0053 16.8 0.5 3.2 7.9 0.1 2.6 2 0 0 2 2 2 1 Zinc ribbon domain TRAF6_Z2 PF18048.1 ORF136685 - 0.0057 16.7 1.9 0.78 9.9 0.0 2.5 2 0 0 2 2 2 1 TNF receptor-associated factor 6 zinc finger 2 zinc_ribbon_4 PF13717.6 ORF136685 - 0.01 15.8 0.3 0.57 10.2 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain zf-Di19 PF05605.12 ORF136685 - 0.013 15.8 1.0 4.7 7.6 0.0 2.3 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding UPF0547 PF10571.9 ORF136685 - 0.015 15.4 1.5 0.93 9.6 0.1 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_5 PF13719.6 ORF136685 - 0.016 14.9 3.3 1.1 9.0 0.4 2.5 2 0 0 2 2 2 0 zinc-ribbon domain ADK_lid PF05191.14 ORF136685 - 0.019 14.9 5.4 0.87 9.6 0.2 3.3 3 1 1 4 4 3 0 Adenylate kinase, active site lid zinc_ribbon_9 PF14369.6 ORF136685 - 0.035 14.3 1.9 1.8 8.9 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon FYVE PF01363.21 ORF136685 - 0.039 14.1 0.8 3.3 7.9 0.0 2.3 2 0 0 2 2 2 0 FYVE zinc finger zf-C2H2_11 PF16622.5 ORF136685 - 0.04 13.7 0.2 8 6.3 0.1 2.5 2 0 0 2 2 2 0 zinc-finger C2H2-type GcpE PF04551.14 ORF136685 - 0.051 12.7 0.0 7.9 5.4 0.0 2.2 2 0 0 2 2 2 0 GcpE protein Rad50_zn_hook PF04423.14 ORF136685 - 0.076 12.9 5.3 0.76 9.7 0.1 3.0 3 0 0 3 3 2 0 Rad50 zinc hook motif zf-FPG_IleRS PF06827.14 ORF136685 - 0.089 12.7 3.3 2.2 8.2 0.3 2.5 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Sgf11 PF08209.11 ORF136685 - 0.11 12.1 0.6 5.8 6.6 0.1 2.4 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Prok-RING_1 PF14446.6 ORF136685 - 0.15 12.0 2.9 1.7 8.7 0.1 2.5 2 1 0 2 2 2 0 Prokaryotic RING finger family 1 Zn_ribbon_recom PF13408.6 ORF136685 - 0.15 12.6 1.6 5.2 7.7 0.2 2.4 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain Zn_Tnp_IS1595 PF12760.7 ORF136685 - 0.19 11.7 1.2 10 6.2 0.1 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-H2C2_2 PF13465.6 ORF136685 - 0.23 11.9 5.9 4.6 7.8 0.1 3.3 4 0 0 4 4 2 0 Zinc-finger double domain zinc_ribbon_2 PF13240.6 ORF136685 - 0.33 10.7 3.5 2.7 7.8 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 ORF136685 - 0.49 9.9 1.6 9.5 5.8 0.2 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding zinc-ribbons_6 PF07191.12 ORF136685 - 0.75 9.8 3.1 15 5.7 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbons zf-LYAR PF08790.11 ORF136685 - 1 9.3 5.5 2.3 8.2 0.0 3.2 4 0 0 4 4 4 0 LYAR-type C2HC zinc finger Zn_ribbon_SprT PF17283.2 ORF136685 - 1.6 8.7 5.5 17 5.4 0.8 2.5 2 0 0 2 2 2 0 SprT-like zinc ribbon domain FYDLN_acid PF09538.10 ORF136685 - 2.9 8.6 6.7 70 4.2 3.7 3.2 2 1 0 2 2 2 0 Protein of unknown function (FYDLN_acid) Zn-C2H2_12 PF18112.1 ORF136685 - 7.8 7.1 7.6 51 4.4 0.0 3.8 4 0 0 4 4 4 0 Autophagy receptor zinc finger-C2H2 domain FAD_binding_3 PF01494.19 ORF128987 - 1.1e-07 31.4 0.0 1.6e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF128987 - 2e-06 27.2 0.0 3.1e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF128987 - 0.00026 20.2 0.9 0.047 12.8 0.6 2.7 3 0 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 ORF128987 - 0.0038 17.4 0.1 0.03 14.6 0.3 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 ORF128987 - 0.023 13.4 0.5 0.054 12.2 0.5 1.6 1 0 0 1 1 1 0 HI0933-like protein Thi4 PF01946.17 ORF128987 - 0.024 13.9 0.1 0.051 12.8 0.1 1.4 1 0 0 1 1 1 0 Thi4 family Pyr_redox PF00070.27 ORF128987 - 0.064 13.8 0.0 5 7.7 0.1 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF128987 - 0.18 11.1 0.1 0.79 8.9 0.1 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase OmpH PF03938.14 ORF126333 - 0.0009 19.6 16.5 0.0009 19.6 16.5 2.1 2 0 0 2 2 2 1 Outer membrane protein (OmpH-like) Exonuc_VII_L PF02601.15 ORF126333 - 0.0064 16.1 5.2 0.0064 16.1 5.2 1.7 2 0 0 2 2 2 1 Exonuclease VII, large subunit Baculo_PEP_C PF04513.12 ORF126333 - 0.0068 16.5 2.1 0.074 13.1 0.0 2.3 1 1 1 2 2 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus Fzo_mitofusin PF04799.13 ORF126333 - 0.047 13.3 0.3 0.047 13.3 0.3 2.3 2 0 0 2 2 2 0 fzo-like conserved region Tweety PF04906.13 ORF126333 - 0.075 11.7 0.6 0.12 11.1 0.6 1.2 1 0 0 1 1 1 0 Tweety USP8_interact PF08941.10 ORF126333 - 0.084 12.7 3.3 0.17 11.7 3.3 1.5 1 0 0 1 1 1 0 USP8 interacting Antimicrobial12 PF08107.11 ORF126333 - 0.35 10.6 1.8 7.9 6.3 0.9 2.3 2 0 0 2 2 2 0 Pleurocidin family DUF737 PF05300.11 ORF126333 - 0.38 11.1 17.8 0.057 13.8 13.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF737) ALMT PF11744.8 ORF126333 - 0.44 9.3 6.4 0.69 8.7 6.4 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter Apolipoprotein PF01442.18 ORF126333 - 0.96 9.3 10.9 5.3 6.9 10.9 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF948 PF06103.11 ORF126333 - 1.5 9.1 7.5 2.3 8.5 0.1 2.9 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) I_LWEQ PF01608.17 ORF126333 - 1.7 8.9 8.8 3.7 7.8 8.8 1.6 1 0 0 1 1 1 0 I/LWEQ domain Syntaxin-6_N PF09177.11 ORF126333 - 3.3 8.3 13.0 6.6 7.4 6.3 3.0 2 1 1 3 3 2 0 Syntaxin 6, N-terminal LMBR1 PF04791.16 ORF126333 - 3.5 6.4 10.5 5.9 5.7 7.1 2.2 2 0 0 2 2 2 0 LMBR1-like membrane protein DUF1664 PF07889.12 ORF126333 - 3.6 7.6 10.9 2.1e+02 1.9 10.8 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF1451 PF07295.11 ORF126333 - 8.5 6.4 11.6 1.5 8.9 7.5 1.8 2 0 0 2 2 2 0 Zinc-ribbon containing domain Zn_Tnp_IS91 PF14319.6 ORF119663 - 0.00029 20.8 2.6 0.00049 20.1 2.6 1.3 1 0 0 1 1 1 1 Transposase zinc-binding domain CRA PF06589.11 ORF119167 - 0.0085 16.2 6.8 0.023 14.8 6.8 1.7 1 0 0 1 1 1 1 Circumsporozoite-related antigen (CRA) TMEM51 PF15345.6 ORF119167 - 0.017 15.0 0.2 0.017 15.0 0.2 1.9 2 0 0 2 2 2 0 Transmembrane protein 51 PA26 PF04636.13 ORF119167 - 0.04 12.8 0.1 0.053 12.5 0.1 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) FAM176 PF14851.6 ORF119167 - 0.054 13.1 0.4 0.054 13.1 0.4 1.6 2 0 0 2 2 2 0 FAM176 family CPSF100_C PF13299.6 ORF119167 - 0.066 13.4 1.5 0.11 12.7 1.5 1.3 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal MMM1 PF10296.9 ORF119167 - 0.089 11.8 0.9 0.12 11.4 0.2 1.5 2 0 0 2 2 2 0 Maintenance of mitochondrial morphology protein 1 NPR3 PF03666.13 ORF119167 - 0.27 10.0 2.8 0.35 9.6 2.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 OAD_gamma PF04277.13 ORF119167 - 0.31 11.7 0.1 0.31 11.7 0.1 3.2 3 0 0 3 3 2 0 Oxaloacetate decarboxylase, gamma chain Serinc PF03348.15 ORF119167 - 0.5 9.2 6.3 4.5 6.1 0.0 2.1 2 0 0 2 2 2 0 Serine incorporator (Serinc) Ac76 PF05814.11 ORF119167 - 0.51 10.4 0.0 0.51 10.4 0.0 2.4 2 0 0 2 2 1 0 Orf76 (Ac76) SHR3_chaperone PF08229.11 ORF119167 - 2.2 7.2 9.7 43 3.0 9.7 2.2 1 1 0 1 1 1 0 ER membrane protein SH3 OST3_OST6 PF04756.13 ORF119167 - 6.3 6.1 8.2 12 5.1 8.2 1.4 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family MFS_1 PF07690.16 ORF118322 - 5e-07 29.0 3.5 5e-07 29.0 3.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF118322 - 9.3e-06 24.7 18.5 2.4e-05 23.4 18.5 1.7 1 1 0 1 1 1 1 Sugar (and other) transporter Tubulin PF00091.25 ORF117781 - 1.9e-46 158.8 0.0 3.7e-46 157.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 ORF117781 - 5.4e-41 139.7 0.1 8e-41 139.2 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 ORF117781 - 0.025 14.3 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 ORF117781 - 0.083 12.1 0.1 0.19 10.9 0.0 1.5 2 0 0 2 2 2 0 Tubulin like TPR_MLP1_2 PF07926.12 ORF117000 - 0.002 18.2 80.0 0.0081 16.2 11.8 5.3 1 1 4 5 5 5 5 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 ORF117000 - 0.42 9.5 86.0 1.2 7.9 27.2 4.0 1 1 3 4 4 4 0 Spc7 kinetochore protein DIE2_ALG10 PF04922.12 ORF114871 - 1.1e-74 252.1 10.7 1.6e-74 251.6 10.7 1.2 1 0 0 1 1 1 1 DIE2/ALG10 family SesA PF17107.5 ORF102675 - 0.63 10.2 9.2 3 8.0 0.6 3.3 2 1 2 4 4 4 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Cauli_DNA-bind PF03310.13 ORF102675 - 0.74 9.9 3.5 0.45 10.6 0.1 2.3 3 0 0 3 3 3 0 Caulimovirus DNA-binding protein Sugar_tr PF00083.24 ORF9831 - 8.2e-24 84.3 13.6 2.5e-23 82.7 13.6 1.6 1 1 0 1 1 1 1 Sugar (and other) transporter Claudin_2 PF13903.6 ORF9831 - 0.21 11.3 4.8 4.4 7.0 4.2 2.8 2 1 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction NUDIX PF00293.28 ORF97480 - 2.6e-06 27.5 0.0 0.00017 21.6 0.0 2.5 1 1 0 1 1 1 1 NUDIX domain DMT_YdcZ PF04657.13 ORF9524 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF9524 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein LRR_6 PF13516.6 ORF93736 - 7.9e-06 25.5 2.7 0.0027 17.6 0.0 4.1 4 0 0 4 4 4 1 Leucine Rich repeat LRR_1 PF00560.33 ORF93736 - 0.0027 18.0 4.8 1.1 10.1 0.0 4.6 5 1 0 5 5 5 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF93736 - 0.0037 17.7 8.3 0.0065 16.9 0.4 4.0 4 1 0 4 4 4 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF93736 - 0.42 10.4 7.5 0.067 13.0 0.7 3.2 3 1 0 3 3 3 0 Leucine rich repeat Fer2_2 PF01799.20 ORF93645 - 1e-29 102.3 0.2 1e-29 102.3 0.2 2.1 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 ORF93645 - 5.5e-11 42.3 1.0 5.5e-11 42.3 1.0 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 ORF93645 - 1.6e-05 24.9 0.1 3.4e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain TAT_signal PF10518.9 ORF93645 - 0.00035 20.3 0.1 0.00035 20.3 0.1 2.3 2 0 0 2 2 2 1 TAT (twin-arginine translocation) pathway signal sequence Fer2_4 PF13510.6 ORF93645 - 0.017 15.2 0.7 0.077 13.1 0.7 2.1 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DMT_YdcZ PF04657.13 ORF84575 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF84575 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein DMT_YdcZ PF04657.13 ORF8328 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF8328 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein DER1 PF04511.15 ORF81174 - 1.3e-09 38.3 15.2 2.6e-09 37.3 15.2 1.4 1 1 0 1 1 1 1 Der1-like family Rhomboid PF01694.22 ORF81174 - 1.2e-06 28.6 5.9 2.2e-06 27.7 5.9 1.5 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 ORF81174 - 0.0077 16.8 1.7 0.0077 16.8 1.7 2.0 1 1 1 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) DUF4059 PF13268.6 ORF81174 - 0.48 10.9 4.2 0.47 10.9 1.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4059) DUF2599 PF10783.9 ORF74043 - 0.11 13.2 0.1 0.27 11.9 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2599) Zip PF02535.22 ORF7188 - 2.4e-37 128.9 3.9 2.7e-37 128.7 3.9 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter DUF1129 PF06570.11 ORF7188 - 0.00048 19.7 0.2 0.00048 19.7 0.2 2.8 2 2 0 2 2 2 1 Protein of unknown function (DUF1129) DUF1043 PF06295.12 ORF7188 - 0.32 11.0 6.0 0.14 12.2 3.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) Glyco_transf_8 PF01501.20 ORF65979 - 2.5e-08 33.8 0.0 6.6e-06 25.9 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 8 Mannosyl_trans3 PF11051.8 ORF65979 - 0.29 10.5 0.0 0.43 9.9 0.0 1.2 1 0 0 1 1 1 0 Mannosyltransferase putative Metallophos PF00149.28 ORF63805 - 5.4e-15 56.4 4.6 8.4e-15 55.8 4.6 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF63805 - 0.067 14.1 0.2 0.19 12.6 0.2 1.7 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C Spc29 PF17082.5 ORF63805 - 0.15 11.9 0.0 0.29 11.0 0.0 1.5 1 0 0 1 1 1 0 Spindle Pole Component 29 DER1 PF04511.15 ORF63140 - 1.3e-09 38.3 15.2 2.6e-09 37.3 15.2 1.4 1 1 0 1 1 1 1 Der1-like family Rhomboid PF01694.22 ORF63140 - 1.2e-06 28.6 5.9 2.2e-06 27.7 5.9 1.5 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 ORF63140 - 0.0077 16.8 1.7 0.0077 16.8 1.7 2.0 1 1 1 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) DUF4059 PF13268.6 ORF63140 - 0.48 10.9 4.2 0.47 10.9 1.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4059) Cys_Met_Meta_PP PF01053.20 ORF57549 - 1.4e-45 155.5 0.0 1.8e-45 155.1 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 ORF57549 - 0.0037 16.5 0.0 0.006 15.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II MHB PF16525.5 ORF57549 - 0.012 15.8 0.1 0.027 14.7 0.1 1.6 1 0 0 1 1 1 0 Haemophore, haem-binding HEAT PF02985.22 ORF456 - 4.3e-16 57.6 2.9 0.14 12.5 0.0 5.6 5 0 0 5 5 5 5 HEAT repeat HEAT_2 PF13646.6 ORF456 - 1.1e-13 51.4 0.2 0.00087 19.6 0.1 4.5 2 2 2 4 4 4 4 HEAT repeats Cnd1 PF12717.7 ORF456 - 6.9e-12 45.7 6.2 1.8e-05 24.8 0.4 3.2 1 1 2 3 3 3 3 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF456 - 2e-09 37.9 1.2 9.1e-06 26.2 0.2 2.6 2 0 0 2 2 2 2 Vacuolar 14 Fab1-binding region Adaptin_N PF01602.20 ORF456 - 2.3e-08 33.1 6.9 3.4e-08 32.5 6.9 1.1 1 0 0 1 1 1 1 Adaptin N terminal region HEAT_EZ PF13513.6 ORF456 - 4.1e-07 30.4 0.1 0.17 12.4 0.0 4.3 2 2 2 4 4 4 2 HEAT-like repeat Arm PF00514.23 ORF456 - 2.7e-06 27.2 0.8 0.16 12.0 0.0 4.8 5 0 0 5 5 5 1 Armadillo/beta-catenin-like repeat V-ATPase_H_C PF11698.8 ORF456 - 1.3e-05 25.3 4.9 0.004 17.3 0.4 2.7 2 0 0 2 2 2 2 V-ATPase subunit H RTP1_C1 PF10363.9 ORF456 - 0.0069 16.6 2.9 0.058 13.6 0.1 2.8 3 0 0 3 3 3 1 Required for nuclear transport of RNA pol II C-terminus 1 RasGEF_N_2 PF14663.6 ORF456 - 0.014 15.8 5.0 0.067 13.6 0.1 3.5 3 1 1 4 4 4 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain CLASP_N PF12348.8 ORF456 - 0.019 14.6 0.4 9.1 5.8 0.0 3.0 2 1 1 3 3 3 0 CLASP N terminal IFRD PF05004.13 ORF456 - 0.023 13.8 1.7 2.2 7.3 0.0 2.8 2 2 1 3 3 3 0 Interferon-related developmental regulator (IFRD) RICTOR_V PF14668.6 ORF456 - 0.053 13.8 0.1 0.88 9.9 0.0 2.8 3 0 0 3 3 3 0 Rapamycin-insensitive companion of mTOR, domain 5 Arm_2 PF04826.13 ORF456 - 0.064 12.7 1.4 3.1 7.2 0.1 2.5 2 1 0 2 2 2 0 Armadillo-like DUF4595 PF15283.6 ORF456 - 0.12 12.5 0.2 0.21 11.6 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4595) with porin-like fold Proteasom_PSMB PF10508.9 ORF456 - 0.12 10.9 6.2 0.67 8.4 0.2 2.2 1 1 0 2 2 2 0 Proteasome non-ATPase 26S subunit GerD PF17898.1 ORF456 - 0.15 12.0 0.1 22 5.0 0.0 2.4 2 0 0 2 2 2 0 Spore germination GerD central core domain DER1 PF04511.15 ORF37413 - 1.3e-09 38.3 15.2 2.6e-09 37.3 15.2 1.4 1 1 0 1 1 1 1 Der1-like family Rhomboid PF01694.22 ORF37413 - 1.2e-06 28.6 5.9 2.2e-06 27.7 5.9 1.5 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 ORF37413 - 0.0077 16.8 1.7 0.0077 16.8 1.7 2.0 1 1 1 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) DUF4059 PF13268.6 ORF37413 - 0.48 10.9 4.2 0.47 10.9 1.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4059) DMT_YdcZ PF04657.13 ORF36343 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF36343 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein Microvir_J PF04726.13 ORF29031 - 0.13 12.2 1.1 0.36 10.8 1.1 1.7 1 0 0 1 1 1 0 Microvirus J protein Sec23_trunk PF04811.15 ORF23899 - 9.6e-07 28.6 1.4 1.2e-06 28.3 0.2 1.7 2 0 0 2 2 2 1 Sec23/Sec24 trunk domain ARID PF01388.21 ORF23899 - 0.0087 16.7 0.0 0.023 15.3 0.0 1.7 1 0 0 1 1 1 1 ARID/BRIGHT DNA binding domain Sec23_BS PF08033.12 ORF23899 - 0.011 16.4 0.0 0.026 15.3 0.0 1.7 1 0 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain Fibrinogen_aC PF12160.8 ORF23899 - 0.037 13.9 2.3 1 9.3 0.2 2.8 3 0 0 3 3 3 0 Fibrinogen alpha C domain Raf1_N PF18578.1 ORF23899 - 0.054 14.0 2.6 0.1 13.1 0.1 2.5 1 1 1 2 2 2 0 Rubisco accumulation factor 1 alpha helical domain Iso_dh PF00180.20 ORF20835 - 1e-65 222.2 0.1 1.2e-65 221.9 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase CTK3 PF12243.8 ORF20835 - 0.026 14.5 0.0 0.19 11.7 0.0 2.2 2 0 0 2 2 2 0 CTD kinase subunit gamma CTK3 MLANA PF14991.6 ORF17248 - 0.035 14.4 0.0 0.072 13.4 0.0 1.5 1 0 0 1 1 1 0 Protein melan-A DER1 PF04511.15 ORF150849 - 1.3e-09 38.3 15.2 2.6e-09 37.3 15.2 1.4 1 1 0 1 1 1 1 Der1-like family Rhomboid PF01694.22 ORF150849 - 1.2e-06 28.6 5.9 2.2e-06 27.7 5.9 1.5 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 ORF150849 - 0.0077 16.8 1.7 0.0077 16.8 1.7 2.0 1 1 1 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) DUF4059 PF13268.6 ORF150849 - 0.48 10.9 4.2 0.47 10.9 1.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4059) AAT PF03417.16 ORF143612 - 3.4e-17 62.9 0.0 4.8e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase DMT_YdcZ PF04657.13 ORF139258 - 0.00043 20.6 9.4 0.00043 20.6 9.4 2.8 2 1 1 3 3 3 1 Putative inner membrane exporter, YdcZ MerC PF03203.14 ORF139258 - 0.025 15.0 4.9 0.025 15.0 4.9 3.4 1 1 2 3 3 3 0 MerC mercury resistance protein MORN PF02493.20 ORF130135 - 2.9e-37 124.4 62.5 9.9e-07 28.3 1.7 10.9 10 2 0 10 10 10 9 MORN repeat Pox_A3L PF05288.11 ORF130135 - 0.013 15.5 0.3 0.013 15.5 0.3 1.6 2 0 0 2 2 2 0 Poxvirus A3L Protein DUF4201 PF13870.6 ORF119122 - 0.0078 16.0 2.9 0.0078 16.0 2.9 3.8 3 1 2 5 5 4 1 Domain of unknown function (DUF4201) FlaC_arch PF05377.11 ORF119122 - 0.062 13.7 0.5 0.062 13.7 0.5 4.0 4 2 0 4 4 3 0 Flagella accessory protein C (FlaC) GCN5L1 PF06320.13 ORF119122 - 0.081 13.1 15.8 0.41 10.8 1.9 3.5 3 0 0 3 3 3 0 GCN5-like protein 1 (GCN5L1) Seryl_tRNA_N PF02403.22 ORF119122 - 0.16 12.2 27.0 0.05 13.8 1.6 4.2 4 0 0 4 4 4 0 Seryl-tRNA synthetase N-terminal domain DHHA1 PF02272.19 ORF119122 - 0.17 12.3 1.7 2.5 8.5 0.0 2.8 3 0 0 3 3 3 0 DHHA1 domain RPW8 PF05659.11 ORF119122 - 0.74 9.5 8.9 1.4 8.6 0.1 2.9 2 1 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 YabA PF06156.13 ORF119122 - 0.91 10.2 18.6 2.9 8.6 2.3 3.5 3 0 0 3 3 3 0 Initiation control protein YabA NPV_P10 PF05531.12 ORF119122 - 1.1 9.7 10.5 0.42 11.1 0.4 3.4 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein HALZ PF02183.18 ORF119122 - 1.3 9.3 17.6 0.18 12.1 1.4 3.2 3 1 0 3 3 2 0 Homeobox associated leucine zipper DUF4140 PF13600.6 ORF119122 - 1.3 9.5 8.4 1.6 9.3 3.1 2.8 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) ZapB PF06005.12 ORF119122 - 2.1 8.8 20.8 0.67 10.4 2.4 3.7 3 0 0 3 3 3 0 Cell division protein ZapB TMCO5 PF14992.6 ORF119122 - 2.2 7.8 23.7 0.028 14.0 2.2 3.2 2 1 1 3 3 3 0 TMCO5 family DUF948 PF06103.11 ORF119122 - 3.2 8.1 6.8 13 6.2 0.1 3.5 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Rootletin PF15035.6 ORF119122 - 3.8 7.5 22.4 0.31 11.0 2.1 3.5 3 0 0 3 3 3 0 Ciliary rootlet component, centrosome cohesion DUF4164 PF13747.6 ORF119122 - 4.6 7.6 12.2 4.7 7.6 2.9 2.9 3 0 0 3 3 2 0 Domain of unknown function (DUF4164) IFP_35_N PF07334.13 ORF119122 - 5.2 7.2 8.0 3.2 7.9 1.3 3.1 2 1 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF3450 PF11932.8 ORF119122 - 5.4 6.2 17.8 0.77 9.0 3.9 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) TPD52 PF04201.15 ORF119122 - 5.7 6.5 10.7 0.15 11.7 0.7 2.7 3 0 0 3 3 3 0 Tumour protein D52 family CENP-F_leu_zip PF10473.9 ORF119122 - 7.6 6.5 26.9 1.4 9.0 6.0 3.2 3 0 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cnn_1N PF07989.11 ORF119122 - 8.3 6.6 18.9 0.9 9.7 2.4 3.9 3 1 0 3 3 3 0 Centrosomin N-terminal motif 1 Peptidase_M23 PF01551.22 ORF118087 - 1.5e-31 108.4 1.2 1.5e-31 108.4 1.2 2.9 2 1 0 3 3 3 1 Peptidase family M23 LysM PF01476.20 ORF118087 - 5.4e-12 45.6 0.5 1.5e-11 44.1 0.2 2.0 2 0 0 2 2 2 1 LysM domain Biotin_lipoyl_2 PF13533.6 ORF118087 - 0.00068 19.4 0.0 0.23 11.3 0.0 2.9 3 0 0 3 3 3 2 Biotin-lipoyl like GCP_C_terminal PF04130.13 ORF117161 - 1.3e-76 258.1 9.6 1.5e-76 257.9 9.6 1.0 1 0 0 1 1 1 1 Gamma tubulin complex component C-terminal DUF2830 PF11125.8 ORF117161 - 0.13 12.2 1.8 17 5.5 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2830) SICA_C PF12879.7 ORF117161 - 0.91 9.5 3.8 1.1 9.3 1.3 2.1 1 1 1 2 2 2 0 SICA C-terminal inner membrane domain PP2C PF00481.21 ORF113000 - 6.4e-58 196.4 0.1 8.6e-58 196.0 0.1 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF113000 - 5.4e-06 26.2 0.0 1.2e-05 25.0 0.0 1.5 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF113000 - 0.00054 19.9 0.0 0.01 15.8 0.0 2.2 2 0 0 2 2 2 1 Stage II sporulation protein E (SpoIIE) DUF4201 PF13870.6 ORF108982 - 0.0078 16.0 2.9 0.0078 16.0 2.9 3.8 3 1 2 5 5 4 1 Domain of unknown function (DUF4201) FlaC_arch PF05377.11 ORF108982 - 0.062 13.7 0.5 0.062 13.7 0.5 4.0 4 2 0 4 4 3 0 Flagella accessory protein C (FlaC) GCN5L1 PF06320.13 ORF108982 - 0.081 13.1 15.8 0.41 10.8 1.9 3.5 3 0 0 3 3 3 0 GCN5-like protein 1 (GCN5L1) Seryl_tRNA_N PF02403.22 ORF108982 - 0.16 12.2 27.0 0.05 13.8 1.6 4.2 4 0 0 4 4 4 0 Seryl-tRNA synthetase N-terminal domain DHHA1 PF02272.19 ORF108982 - 0.17 12.3 1.7 2.5 8.5 0.0 2.8 3 0 0 3 3 3 0 DHHA1 domain RPW8 PF05659.11 ORF108982 - 0.74 9.5 8.9 1.4 8.6 0.1 2.9 2 1 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 YabA PF06156.13 ORF108982 - 0.91 10.2 18.6 2.9 8.6 2.3 3.5 3 0 0 3 3 3 0 Initiation control protein YabA NPV_P10 PF05531.12 ORF108982 - 1.1 9.7 10.5 0.42 11.1 0.4 3.4 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein HALZ PF02183.18 ORF108982 - 1.3 9.3 17.6 0.18 12.1 1.4 3.2 3 1 0 3 3 2 0 Homeobox associated leucine zipper DUF4140 PF13600.6 ORF108982 - 1.3 9.5 8.4 1.6 9.3 3.1 2.8 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) ZapB PF06005.12 ORF108982 - 2.1 8.8 20.8 0.67 10.4 2.4 3.7 3 0 0 3 3 3 0 Cell division protein ZapB TMCO5 PF14992.6 ORF108982 - 2.2 7.8 23.7 0.028 14.0 2.2 3.2 2 1 1 3 3 3 0 TMCO5 family DUF948 PF06103.11 ORF108982 - 3.2 8.1 6.8 13 6.2 0.1 3.5 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Rootletin PF15035.6 ORF108982 - 3.8 7.5 22.4 0.31 11.0 2.1 3.5 3 0 0 3 3 3 0 Ciliary rootlet component, centrosome cohesion DUF4164 PF13747.6 ORF108982 - 4.6 7.6 12.2 4.7 7.6 2.9 2.9 3 0 0 3 3 2 0 Domain of unknown function (DUF4164) IFP_35_N PF07334.13 ORF108982 - 5.2 7.2 8.0 3.2 7.9 1.3 3.1 2 1 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF3450 PF11932.8 ORF108982 - 5.4 6.2 17.8 0.77 9.0 3.9 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) TPD52 PF04201.15 ORF108982 - 5.7 6.5 10.7 0.15 11.7 0.7 2.7 3 0 0 3 3 3 0 Tumour protein D52 family CENP-F_leu_zip PF10473.9 ORF108982 - 7.6 6.5 26.9 1.4 9.0 6.0 3.2 3 0 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cnn_1N PF07989.11 ORF108982 - 8.3 6.6 18.9 0.9 9.7 2.4 3.9 3 1 0 3 3 3 0 Centrosomin N-terminal motif 1 DUF5408 PF17402.2 ORF10848 - 0.022 14.6 4.5 0.087 12.7 4.5 2.1 1 0 0 1 1 1 0 Family of unknown function (DUF5408) 4HB_MCP_1 PF12729.7 ORF107483 - 7 6.2 8.4 0.52 9.8 0.1 2.5 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction IBR PF01485.21 ORF103439 - 2.9e-16 59.4 41.3 2.3e-10 40.5 5.3 3.9 3 1 0 3 3 3 2 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF103439 - 6.4e-07 29.6 5.7 6.4e-07 29.6 5.7 3.7 3 0 0 3 3 3 1 Ring finger domain zf-ANAPC11 PF12861.7 ORF103439 - 0.00013 22.0 0.7 0.00013 22.0 0.7 3.3 3 1 0 3 3 3 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF103439 - 0.0014 18.4 6.1 0.0014 18.4 6.1 4.4 3 1 1 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF103439 - 0.0016 18.1 4.9 0.0016 18.1 4.9 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF103439 - 0.0032 17.4 4.9 0.0032 17.4 4.9 4.4 2 1 1 3 3 3 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF103439 - 0.0037 17.1 6.6 0.0037 17.1 6.6 5.1 3 2 1 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF103439 - 0.023 15.0 4.3 0.023 15.0 4.3 3.7 3 1 0 3 3 3 0 RING-H2 zinc finger domain zf-Nse PF11789.8 ORF103439 - 1 9.2 11.4 3.2 7.6 3.8 3.6 3 0 0 3 3 3 0 Zinc-finger of the MIZ type in Nse subunit Golgin_A5 PF09787.9 ORF77768 - 0.11 11.9 18.4 0.17 11.4 18.4 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF812 PF05667.11 ORF77768 - 0.37 9.6 21.0 0.51 9.2 21.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Filament PF00038.21 ORF77768 - 0.37 10.3 21.5 0.19 11.3 19.4 1.6 1 1 0 1 1 1 0 Intermediate filament protein ADIP PF11559.8 ORF77768 - 0.58 10.2 27.4 0.082 13.0 22.7 2.0 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding SlyX PF04102.12 ORF77768 - 0.77 10.4 9.8 1.3 9.7 0.8 2.9 1 1 2 3 3 3 0 SlyX LPP PF04728.13 ORF77768 - 0.78 10.2 8.2 3.7 8.0 1.7 2.8 2 0 0 2 2 2 0 Lipoprotein leucine-zipper DUF4795 PF16043.5 ORF77768 - 0.83 9.2 23.6 0.11 12.0 7.5 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Jnk-SapK_ap_N PF09744.9 ORF77768 - 1.6 8.9 20.8 0.65 10.2 17.9 1.7 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Atg14 PF10186.9 ORF77768 - 1.9 7.5 25.1 6.2 5.8 25.1 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CC2-LZ PF16516.5 ORF77768 - 2.2 8.7 22.9 2.2 8.7 10.8 3.2 2 1 2 4 4 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF3450 PF11932.8 ORF77768 - 4 6.7 19.1 2.4 7.4 14.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) SseC PF04888.12 ORF77768 - 6.2 6.3 11.4 3.9 7.0 9.6 1.6 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family HIP1_clath_bdg PF16515.5 ORF77768 - 6.2 7.5 17.6 6.4 7.5 12.7 2.9 2 1 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CENP-F_leu_zip PF10473.9 ORF77768 - 6.4 6.8 25.7 0.18 11.8 14.5 2.7 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Prominin PF05478.11 ORF77768 - 7.4 4.4 17.9 10 3.9 17.9 1.2 1 0 0 1 1 1 0 Prominin Prefoldin_2 PF01920.20 ORF77768 - 8.4 6.4 25.4 6.1 6.8 16.8 2.6 1 1 0 2 2 2 0 Prefoldin subunit AATase PF07247.12 ORF75444 - 1.7e-06 26.9 1.0 1.7e-06 26.9 1.0 1.8 1 1 1 2 2 2 1 Alcohol acetyltransferase DUF1298 PF06974.13 ORF75444 - 2.1e-05 24.5 0.0 4.7e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF75444 - 4.5e-05 23.3 0.0 6.9e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain DUF5082 PF16888.5 ORF72440 - 0.00075 19.8 16.9 0.00075 19.8 16.9 3.6 1 1 1 2 2 2 1 Domain of unknown function (DUF5082) Fzo_mitofusin PF04799.13 ORF72440 - 1.5 8.4 35.5 0.049 13.2 5.0 4.3 3 1 1 4 4 4 0 fzo-like conserved region CENP-Q PF13094.6 ORF72440 - 2.5 8.3 60.6 0.71 10.1 25.3 3.0 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF948 PF06103.11 ORF72440 - 3.2 8.1 21.0 0.31 11.3 1.1 3.7 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) TIR-like PF10137.9 ORF72440 - 6.9 6.7 5.9 2.9 7.9 0.2 2.8 1 1 1 2 2 2 0 Predicted nucleotide-binding protein containing TIR-like domain MFS_1 PF07690.16 ORF70239 - 4e-21 75.3 52.2 2.2e-19 69.6 26.0 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF70239 - 0.00028 19.9 6.0 0.00028 19.9 6.0 1.8 2 1 0 2 2 2 1 Sugar (and other) transporter Tail_VII PF17091.5 ORF70239 - 0.2 11.5 3.9 0.87 9.5 3.9 2.1 1 0 0 1 1 1 0 Inovirus G7P protein SEP PF08059.13 ORF68828 - 7.4e-10 39.3 0.2 3.9e-09 36.9 0.1 2.3 1 1 1 2 2 2 1 SEP domain UBX PF00789.20 ORF68828 - 3.1e-08 33.7 0.0 1.2e-07 31.8 0.0 2.0 1 0 0 1 1 1 1 UBX domain TMPIT PF07851.13 ORF68828 - 0.12 11.6 3.2 0.18 11.0 3.2 1.3 1 0 0 1 1 1 0 TMPIT-like protein CENP-H PF05837.12 ORF68828 - 0.18 12.2 5.0 0.41 11.1 5.0 1.6 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Cnn_1N PF07989.11 ORF68828 - 0.77 10.0 8.9 0.37 11.0 5.5 2.3 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 TSC22 PF01166.18 ORF68828 - 0.95 9.8 9.3 0.11 12.8 2.6 3.0 3 0 0 3 3 3 0 TSC-22/dip/bun family PSI_integrin PF17205.3 ORF60584 - 0.043 13.6 0.6 0.043 13.6 0.6 2.3 2 0 0 2 2 2 0 Integrin plexin domain MFS_1 PF07690.16 ORF55543 - 4e-21 75.3 52.2 2.2e-19 69.6 26.0 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF55543 - 0.00028 19.9 6.0 0.00028 19.9 6.0 1.8 2 1 0 2 2 2 1 Sugar (and other) transporter Tail_VII PF17091.5 ORF55543 - 0.2 11.5 3.9 0.87 9.5 3.9 2.1 1 0 0 1 1 1 0 Inovirus G7P protein UCH PF00443.29 ORF53160 - 1.1e-24 87.4 0.0 1.4e-24 87.0 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PH PF00169.29 ORF53160 - 3.6e-13 49.9 0.0 6.3e-13 49.2 0.0 1.4 1 0 0 1 1 1 1 PH domain UCH_1 PF13423.6 ORF53160 - 4.5e-12 46.2 0.0 6.7e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PH_11 PF15413.6 ORF53160 - 4.5e-05 23.8 0.1 0.0002 21.8 0.1 2.0 1 1 0 1 1 1 1 Pleckstrin homology domain zf_UBZ PF18439.1 ORF53160 - 0.0069 16.0 3.0 0.61 9.7 0.3 2.5 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger OrfB_Zn_ribbon PF07282.11 ORF53160 - 0.0073 16.2 0.3 0.74 9.8 0.0 2.5 2 0 0 2 2 2 1 Putative transposase DNA-binding domain PH_3 PF14593.6 ORF53160 - 0.023 14.8 0.0 0.069 13.2 0.0 1.7 2 0 0 2 2 2 0 PH domain DZR PF12773.7 ORF53160 - 0.024 14.7 0.1 0.082 12.9 0.1 1.9 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 ORF53160 - 0.028 13.8 1.4 5.5 6.5 0.1 2.6 2 0 0 2 2 2 0 zinc-ribbon domain PH_8 PF15409.6 ORF53160 - 0.11 12.7 0.0 0.6 10.4 0.0 2.1 2 0 0 2 2 2 0 Pleckstrin homology domain CpXC PF14353.6 ORF53160 - 0.28 11.2 1.1 5.4 7.1 0.0 2.4 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_4 PF13717.6 ORF53160 - 0.35 10.8 3.4 1.1 9.3 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 ORF53160 - 0.66 9.8 3.4 22 4.9 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain SurA_N PF09312.11 ORF49664 - 1e-45 154.6 9.0 1e-45 154.6 9.0 1.7 2 0 0 2 2 2 1 SurA N-terminal domain Rotamase PF00639.21 ORF49664 - 6e-22 78.4 0.0 2.2e-21 76.6 0.0 2.0 2 0 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF49664 - 3.7e-18 66.2 0.0 6.8e-18 65.3 0.0 1.5 1 0 0 1 1 1 1 PPIC-type PPIASE domain SurA_N_3 PF13624.6 ORF49664 - 5e-14 52.4 4.9 1.2e-13 51.1 4.9 1.7 1 0 0 1 1 1 1 SurA N-terminal domain Rotamase_2 PF13145.6 ORF49664 - 5.5e-07 30.5 0.0 2.1e-06 28.6 0.0 1.9 2 0 0 2 2 2 1 PPIC-type PPIASE domain SurA_N_2 PF13623.6 ORF49664 - 2e-06 27.7 5.1 2e-06 27.7 5.1 2.2 1 1 1 2 2 2 1 SurA N-terminal domain Trigger_C PF05698.14 ORF49664 - 0.00065 19.8 2.3 0.00065 19.8 2.3 2.0 2 1 0 2 2 2 1 Bacterial trigger factor protein (TF) C-terminus SpoVIF PF14069.6 ORF49664 - 5.8 6.8 8.6 12 5.7 2.4 3.7 2 2 1 3 3 3 0 Stage VI sporulation protein F Aldedh PF00171.22 ORF48055 - 2.5e-40 138.4 0.0 3e-40 138.1 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1213 PF06740.12 ORF48055 - 0.15 12.6 3.9 0.55 10.9 3.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1213) Shisa PF13908.6 ORF46927 - 4.3 7.6 8.8 0.089 13.0 1.3 2.0 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator Actin PF00022.19 ORF45218 - 1e-124 416.3 0.0 5.3e-124 413.9 0.0 1.8 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF45218 - 0.061 12.1 0.0 3.5 6.3 0.0 2.4 3 0 0 3 3 3 0 MreB/Mbl protein Golgin_A5 PF09787.9 ORF42021 - 0.1 12.1 18.4 0.17 11.4 18.4 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4795 PF16043.5 ORF42021 - 0.35 10.4 22.2 0.11 12.1 8.2 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) ADIP PF11559.8 ORF42021 - 0.5 10.4 27.4 0.082 13.0 22.7 2.1 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding LPP PF04728.13 ORF42021 - 0.67 10.4 8.2 3.7 8.0 1.7 3.0 2 0 0 2 2 2 0 Lipoprotein leucine-zipper SlyX PF04102.12 ORF42021 - 0.78 10.4 9.8 1.3 9.7 0.8 2.9 1 1 2 3 3 3 0 SlyX Filament PF00038.21 ORF42021 - 1.5 8.3 25.0 0.13 11.8 18.9 2.1 2 1 0 2 2 2 0 Intermediate filament protein Atg14 PF10186.9 ORF42021 - 1.7 7.7 25.1 6.2 5.8 25.1 1.9 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CC2-LZ PF16516.5 ORF42021 - 1.9 8.9 22.9 2.2 8.7 10.8 3.3 2 1 2 4 4 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF3450 PF11932.8 ORF42021 - 3.6 6.8 19.1 2.4 7.4 14.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) CENP-F_leu_zip PF10473.9 ORF42021 - 4.9 7.2 25.7 0.18 11.8 14.5 2.9 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 SseC PF04888.12 ORF42021 - 5.3 6.6 11.4 3.9 7.0 9.6 1.7 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family Prominin PF05478.11 ORF42021 - 5.5 4.8 17.9 10 3.9 17.9 1.4 1 0 0 1 1 1 0 Prominin XhlA PF10779.9 ORF42021 - 5.7 7.2 19.5 0.27 11.4 6.5 3.9 3 0 0 3 3 3 0 Haemolysin XhlA Prefoldin_2 PF01920.20 ORF42021 - 6.7 6.7 25.4 6.1 6.8 16.8 2.8 1 1 0 2 2 2 0 Prefoldin subunit Jnk-SapK_ap_N PF09744.9 ORF42021 - 7.3 6.8 23.8 0.65 10.2 17.9 2.2 2 1 0 2 2 2 0 JNK_SAPK-associated protein-1 Cyclin_N PF00134.23 ORF34107 - 7.3e-16 58.1 2.1 1.8e-15 56.8 0.2 2.3 2 1 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF34107 - 8e-13 48.5 0.0 1.5e-12 47.7 0.0 1.5 1 0 0 1 1 1 1 Cyclin, C-terminal domain zf-C2HC5 PF06221.13 ORF34107 - 0.061 13.3 2.0 0.14 12.2 2.0 1.6 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type KIP1 PF07765.12 ORF34107 - 0.12 12.5 4.0 2.6 8.2 0.1 2.8 3 0 0 3 3 3 0 KIP1-like protein AAA PF00004.29 ORF33786 - 1.7e-44 151.4 0.1 4.9e-44 150.0 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 ORF33786 - 2e-09 37.2 0.0 1.3e-08 34.7 0.0 2.2 2 0 0 2 2 2 1 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 ORF33786 - 3.7e-08 33.5 0.1 1.5e-07 31.5 0.1 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_3 PF17862.1 ORF33786 - 4.7e-08 32.7 0.0 1e-07 31.6 0.0 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 ORF33786 - 7.3e-08 32.7 0.0 2.3e-07 31.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 ORF33786 - 9.8e-06 26.0 0.1 0.00047 20.6 0.0 2.4 1 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 ORF33786 - 3.7e-05 23.5 0.0 0.00015 21.6 0.0 2.0 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain RNA_helicase PF00910.22 ORF33786 - 9.2e-05 22.8 0.0 0.00021 21.6 0.0 1.6 1 0 0 1 1 1 1 RNA helicase DUF815 PF05673.13 ORF33786 - 0.00011 21.4 0.0 0.00025 20.3 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 ORF33786 - 0.00016 22.0 0.4 0.013 15.8 0.0 2.5 1 1 1 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF33786 - 0.00061 20.3 0.0 0.0014 19.2 0.0 1.8 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 ORF33786 - 0.0012 18.2 0.1 0.0034 16.6 0.0 1.9 1 1 1 2 2 2 1 TIP49 P-loop domain AAA_28 PF13521.6 ORF33786 - 0.0017 18.6 0.0 0.0036 17.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 ORF33786 - 0.002 17.6 0.1 0.0053 16.2 0.1 1.7 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 ORF33786 - 0.0021 17.6 0.1 0.014 15.0 0.1 2.1 1 1 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF33786 - 0.0031 17.2 0.1 0.16 11.6 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_30 PF13604.6 ORF33786 - 0.0044 16.8 0.1 0.012 15.4 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 ORF33786 - 0.0045 16.7 0.1 0.012 15.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF33786 - 0.0053 16.5 0.0 0.012 15.3 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_3 PF07726.11 ORF33786 - 0.0061 16.4 0.1 0.018 14.9 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 ORF33786 - 0.0064 16.4 0.2 0.25 11.2 0.0 3.0 3 0 0 3 3 3 1 NTPase AAA_14 PF13173.6 ORF33786 - 0.0087 16.1 0.1 0.032 14.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF33786 - 0.011 15.9 0.0 0.035 14.2 0.0 2.0 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 ORF33786 - 0.013 15.4 0.3 0.38 10.6 0.0 3.0 3 0 0 3 3 3 0 NACHT domain TsaE PF02367.17 ORF33786 - 0.014 15.4 0.0 0.025 14.6 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 ORF33786 - 0.02 14.0 0.0 0.042 12.9 0.0 1.5 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 ORF33786 - 0.028 14.0 0.3 0.11 12.1 0.1 1.9 1 1 0 2 2 2 0 AAA domain ATPase PF06745.13 ORF33786 - 0.05 12.9 0.7 0.23 10.8 0.0 2.2 3 0 0 3 3 3 0 KaiC AAA_17 PF13207.6 ORF33786 - 0.11 13.0 0.0 0.39 11.2 0.0 2.1 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 ORF33786 - 0.16 12.3 0.2 0.51 10.7 0.1 1.9 2 0 0 2 2 1 0 AAA domain RMI1_N PF08585.12 ORF30019 - 2.9e-07 30.5 3.2 2.9e-07 30.5 3.2 1.6 2 0 0 2 2 2 1 RecQ mediated genome instability protein Tenui_NCP PF04876.12 ORF30019 - 0.2 11.2 3.1 0.17 11.5 0.5 2.1 2 0 0 2 2 2 0 Tenuivirus major non-capsid protein DUF5365 PF17326.2 ORF30019 - 0.97 9.9 15.4 0.34 11.3 0.8 3.2 3 1 0 3 3 3 0 Family of unknown function (DUF5365) CPSase_L_D3 PF02787.19 ORF30019 - 2.1 8.7 8.1 0.37 11.1 3.2 2.5 2 2 1 3 3 3 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Asp PF00026.23 ORF29209 - 0.00045 19.8 0.1 0.065 12.7 0.0 2.1 1 1 1 2 2 2 2 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF29209 - 0.13 12.0 0.0 1.1 9.0 0.0 2.1 2 0 0 2 2 2 0 Xylanase inhibitor C-terminal Actin PF00022.19 ORF26424 - 9.6e-125 416.4 0.0 4.9e-124 414.0 0.0 1.8 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF26424 - 0.061 12.1 0.0 3.5 6.3 0.0 2.4 3 0 0 3 3 3 0 MreB/Mbl protein Actin PF00022.19 ORF141341 - 1e-124 416.3 0.0 5.3e-124 413.9 0.0 1.8 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF141341 - 0.061 12.1 0.0 3.5 6.3 0.0 2.4 3 0 0 3 3 3 0 MreB/Mbl protein DHHC PF01529.20 ORF138843 - 3.1e-26 92.1 6.2 6.1e-26 91.1 6.2 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks40.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks40.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks40.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks40.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:19:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ornatin PF02088.15 NODE_80465_length_197_cov_0.987654_g72524_i0forward_frame_1 - 0.95 9.3 3.8 6.2 6.7 0.9 2.2 2 0 0 2 2 2 0 Ornatin DUF3399 PF11879.8 NODE_80460_length_197_cov_0.987654_g72519_i0forward_frame_1 - 0.083 13.2 0.3 0.095 13.0 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) HHV-1_VABD PF16852.5 NODE_80458_length_197_cov_0.987654_g72517_i0reverse_frame_1 - 0.075 13.1 0.2 0.11 12.5 0.2 1.4 1 0 0 1 1 1 0 Herpes viral adaptor-to-host cellular mRNA binding domain GARS_A PF01071.19 NODE_80449_length_197_cov_0.987654_g72508_i0reverse_frame_1 - 1.9e-16 60.4 0.0 2.1e-16 60.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_3 PF02655.14 NODE_80449_length_197_cov_0.987654_g72508_i0reverse_frame_1 - 0.083 12.9 0.0 0.094 12.8 0.0 1.0 1 0 0 1 1 1 0 ATP-grasp domain DUF1601 PF07671.11 NODE_80433_length_197_cov_0.987654_g72492_i0forward_frame_1 - 0.18 11.7 0.3 0.43 10.5 0.0 1.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1601) Limkain-b1 PF11608.8 NODE_80422_length_197_cov_1.067901_g72481_i0forward_frame_1 - 0.19 11.8 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Limkain b1 MAGE_N PF12440.8 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_1 - 0.012 16.3 3.9 0.015 16.0 3.9 1.1 1 0 0 1 1 1 0 Melanoma associated antigen family N terminal V4R PF02830.18 NODE_80408_length_197_cov_1.166667_g72467_i0reverse_frame_1 - 0.045 13.8 0.4 0.07 13.1 0.4 1.4 1 1 0 1 1 1 0 V4R domain DUF489 PF04356.12 NODE_80407_length_197_cov_1.166667_g72466_i0forward_frame_1 - 0.069 13.2 0.0 0.069 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF489) DUF1069 PF06370.11 NODE_80407_length_197_cov_1.166667_g72466_i0forward_frame_1 - 0.18 11.3 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1069) Kri1 PF05178.12 NODE_80401_length_197_cov_1.185185_g72460_i0reverse_frame_1 - 1.5e-07 31.9 5.4 1.6e-07 31.8 5.4 1.1 1 0 0 1 1 1 1 KRI1-like family Phage_lysozyme PF00959.19 NODE_80401_length_197_cov_1.185185_g72460_i0reverse_frame_1 - 0.13 12.7 0.0 0.14 12.6 0.0 1.0 1 0 0 1 1 1 0 Phage lysozyme Cytochrom_B_C PF00032.17 NODE_80394_length_197_cov_1.222222_g72453_i0forward_frame_1 - 0.039 14.3 0.6 0.042 14.1 0.6 1.1 1 0 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD Zap1_zf2 PF18217.1 NODE_80390_length_197_cov_1.228395_g72449_i0forward_frame_1 - 0.0098 15.9 1.9 2.4 8.2 0.9 2.4 2 0 0 2 2 2 2 Zap1 zinc finger 2 ABC_membrane_3 PF13748.6 NODE_80384_length_197_cov_1.234568_g72443_i0forward_frame_1 - 0.1 11.8 1.5 0.11 11.7 1.5 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region DUF460 PF04312.13 NODE_80379_length_197_cov_1.246914_g72438_i0reverse_frame_1 - 0.11 12.2 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF460) IIGP PF05049.13 NODE_80361_length_197_cov_1.364198_g72420_i0reverse_frame_1 - 0.0072 15.4 1.4 0.0078 15.3 1.4 1.0 1 0 0 1 1 1 1 Interferon-inducible GTPase (IIGP) B56 PF01603.20 NODE_80360_length_197_cov_1.370370_g72419_i0reverse_frame_1 - 0.0051 15.9 0.7 0.0055 15.7 0.7 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) Ycf70 PF17382.2 NODE_80358_length_197_cov_1.382716_g72417_i0reverse_frame_1 - 3 8.3 5.3 0.85 10.1 2.6 1.5 1 1 1 2 2 2 0 Uncharacterized Ycf70-like zf-CCHC_2 PF13696.6 NODE_80358_length_197_cov_1.382716_g72417_i0forward_frame_1 - 3.3e-13 49.2 5.0 4.8e-13 48.7 5.0 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC PF00098.23 NODE_80358_length_197_cov_1.382716_g72417_i0forward_frame_1 - 5.9e-06 26.1 2.4 1.5e-05 24.9 1.1 2.0 2 0 0 2 2 2 1 Zinc knuckle zf-CCHC_3 PF13917.6 NODE_80358_length_197_cov_1.382716_g72417_i0forward_frame_1 - 0.016 15.2 0.5 0.024 14.6 0.1 1.5 2 0 0 2 2 2 0 Zinc knuckle DUF5506 PF17611.2 NODE_80354_length_197_cov_1.401235_g72413_i0reverse_frame_1 - 0.081 12.8 0.3 0.086 12.7 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5506) MS_channel PF00924.18 NODE_80351_length_197_cov_1.407407_g72410_i0forward_frame_1 - 0.18 11.3 1.2 0.2 11.2 1.2 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel EpoR_lig-bind PF09067.10 NODE_80350_length_197_cov_1.425926_g72409_i0forward_frame_1 - 0.13 12.5 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Erythropoietin receptor, ligand binding FERM_F2 PF18377.1 NODE_80347_length_197_cov_1.438272_g72406_i0forward_frame_1 - 0.15 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 FERM F2 acyl-CoA binding protein-like domain Adeno_shaft PF00608.17 NODE_80344_length_197_cov_1.444444_g72403_i0reverse_frame_1 - 0.12 12.3 0.1 0.86 9.5 0.0 2.0 2 0 0 2 2 2 0 Adenoviral fibre protein (repeat/shaft region) WD40 PF00400.32 NODE_80340_length_197_cov_1.456790_g72399_i0forward_frame_1 - 8.2e-06 26.5 0.4 0.12 13.3 0.1 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat TORC_M PF12885.7 NODE_80339_length_197_cov_1.462963_g72398_i0reverse_frame_1 - 0.1 12.5 1.1 0.1 12.5 1.1 1.0 1 0 0 1 1 1 0 Transducer of regulated CREB activity middle domain SH2_2 PF14633.6 NODE_80339_length_197_cov_1.462963_g72398_i0reverse_frame_1 - 0.34 10.3 2.7 0.36 10.2 2.7 1.0 1 0 0 1 1 1 0 SH2 domain DUF4131 PF13567.6 NODE_80339_length_197_cov_1.462963_g72398_i0forward_frame_1 - 0.69 9.6 6.8 0.74 9.5 6.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3566 PF12089.8 NODE_80339_length_197_cov_1.462963_g72398_i0forward_frame_1 - 2.5 8.5 5.6 6.2 7.2 3.9 1.9 1 1 1 2 2 2 0 Transmembrane domain of unknown function (DUF3566) SKA2 PF16740.5 NODE_80328_length_197_cov_1.475309_g72387_i0reverse_frame_1 - 0.065 13.0 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 DUF951 PF06107.11 NODE_80315_length_197_cov_1.481481_g72374_i0forward_frame_1 - 0.11 12.4 0.9 0.2 11.6 0.9 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF951) Carla_C4 PF01623.17 NODE_80314_length_197_cov_1.481481_g72373_i0reverse_frame_1 - 0.036 14.0 0.3 0.042 13.8 0.3 1.2 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein Neurexophilin PF06312.12 NODE_80311_length_197_cov_1.481481_g72370_i0forward_frame_1 - 0.091 12.2 0.0 0.095 12.2 0.0 1.0 1 0 0 1 1 1 0 Neurexophilin Flp_N PF03930.14 NODE_80308_length_197_cov_1.500000_g72367_i0forward_frame_1 - 0.042 13.8 0.8 0.045 13.7 0.1 1.4 2 0 0 2 2 2 0 Recombinase Flp protein N-terminus Pox_T4_C PF04490.12 NODE_80302_length_197_cov_1.574074_g72361_i0forward_frame_1 - 0.24 11.6 6.6 0.27 11.4 6.6 1.0 1 0 0 1 1 1 0 Poxvirus T4 protein, C terminus Regnase_1_C PF18561.1 NODE_80300_length_197_cov_1.604938_g72359_i0reverse_frame_1 - 0.0066 16.2 0.0 0.01 15.6 0.0 1.3 1 0 0 1 1 1 1 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain Peptidase_M44 PF03410.13 NODE_80300_length_197_cov_1.604938_g72359_i0forward_frame_1 - 0.27 9.8 0.1 0.25 9.9 0.1 1.0 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox Tht1 PF04163.12 NODE_80298_length_197_cov_1.623457_g72357_i0reverse_frame_1 - 0.11 11.3 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein UB2H PF14814.6 NODE_80295_length_197_cov_1.648148_g72354_i0reverse_frame_1 - 0.011 15.7 0.2 0.012 15.6 0.2 1.1 1 0 0 1 1 1 0 Bifunctional transglycosylase second domain Tubulin_2 PF13809.6 NODE_80294_length_197_cov_1.654321_g72353_i0reverse_frame_1 - 0.14 11.3 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Tubulin like zf-SAP30 PF13866.6 NODE_80291_length_197_cov_1.666667_g72350_i0reverse_frame_1 - 0.13 12.4 0.3 0.41 10.8 0.3 1.8 1 1 1 2 2 2 0 SAP30 zinc-finger V_ATPase_I PF01496.19 NODE_80290_length_197_cov_1.666667_g72349_i0reverse_frame_1 - 1.8e-06 26.2 0.0 1.9e-06 26.2 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Antimicrobial25 PF16839.5 NODE_80281_length_197_cov_1.722222_g72340_i0forward_frame_1 - 1.3 9.1 16.1 1.6 8.8 2.5 2.2 1 1 1 2 2 2 0 Nematode antimicrobial peptide DUF4431 PF14485.6 NODE_80277_length_197_cov_1.728395_g72336_i0reverse_frame_1 - 0.049 13.4 0.0 0.077 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4431) zf-RING_11 PF17123.5 NODE_80276_length_197_cov_1.728395_g72335_i0forward_frame_1 - 0.086 12.6 0.2 0.086 12.6 0.2 1.7 2 0 0 2 2 2 0 RING-like zinc finger TFX_C PF14601.6 NODE_80275_length_197_cov_1.759259_g72334_i0reverse_frame_1 - 0.15 12.0 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 DNA_binding protein, TFX, C-term GH131_N PF18271.1 NODE_80272_length_197_cov_1.771605_g72331_i0reverse_frame_1 - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 Glycoside hydrolase 131 catalytic N-terminal domain DUF3839 PF12943.7 NODE_80269_length_197_cov_1.796296_g72328_i0reverse_frame_1 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3839) ACDC PF14733.6 NODE_80263_length_197_cov_1.864198_g72322_i0reverse_frame_1 - 0.043 14.1 1.3 0.05 13.9 1.3 1.2 1 0 0 1 1 1 0 AP2-coincident C-terminal Zip PF02535.22 NODE_80261_length_197_cov_1.876543_g72320_i0forward_frame_1 - 0.17 11.1 3.7 0.17 11.1 3.7 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter F-box-like PF12937.7 NODE_80257_length_197_cov_1.907407_g72316_i0forward_frame_1 - 0.88 9.5 4.5 0.51 10.3 1.2 1.9 2 0 0 2 2 2 0 F-box-like ChaC PF04752.12 NODE_80252_length_197_cov_1.950617_g72311_i0reverse_frame_1 - 0.031 14.3 0.1 0.037 14.1 0.1 1.1 1 0 0 1 1 1 0 ChaC-like protein Sod_Fe_N PF00081.22 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_1 - 5.8e-07 29.9 0.1 7.3e-07 29.6 0.1 1.2 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Sod_Fe_C PF02777.18 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_1 - 0.011 15.8 0.1 0.067 13.4 0.0 1.9 2 0 0 2 2 2 0 Iron/manganese superoxide dismutases, C-terminal domain MPM1 PF17234.2 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_1 - 0.091 13.0 0.0 0.099 12.9 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 DUF4556 PF15094.6 NODE_80243_length_197_cov_1.993827_g72302_i0forward_frame_1 - 0.085 12.1 0.6 0.096 11.9 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4556) Tetraspanin PF00335.20 NODE_80240_length_197_cov_2.006173_g72299_i0reverse_frame_1 - 0.00035 20.3 13.1 0.00038 20.2 13.1 1.0 1 0 0 1 1 1 1 Tetraspanin family SUR7 PF06687.12 NODE_80240_length_197_cov_2.006173_g72299_i0reverse_frame_1 - 4.8 6.8 11.9 5.5 6.5 11.9 1.0 1 0 0 1 1 1 0 SUR7/PalI family CENP-B_N PF04218.13 NODE_80237_length_197_cov_2.030864_g72296_i0reverse_frame_1 - 0.025 14.2 0.1 0.039 13.6 0.1 1.3 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Thymidylat_synt PF00303.19 NODE_80234_length_197_cov_2.055556_g72293_i0reverse_frame_1 - 0.099 11.8 0.6 0.12 11.5 0.6 1.1 1 0 0 1 1 1 0 Thymidylate synthase PPV_E2_C PF00511.17 NODE_80232_length_197_cov_2.061728_g72291_i0forward_frame_1 - 0.042 14.0 0.0 0.058 13.6 0.0 1.3 1 0 0 1 1 1 0 E2 (early) protein, C terminal BRX_assoc PF16627.5 NODE_80229_length_197_cov_2.080247_g72288_i0reverse_frame_1 - 0.14 12.3 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Unstructured region between BRX_N and BRX domain TauE PF01925.19 NODE_80218_length_197_cov_2.216049_g72277_i0reverse_frame_1 - 0.0033 17.1 0.3 0.0035 17.0 0.3 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Colicin_Ia PF11504.8 NODE_80218_length_197_cov_2.216049_g72277_i0forward_frame_1 - 0.088 12.9 0.3 0.11 12.7 0.3 1.2 1 0 0 1 1 1 0 Colicin Ia Helicase_C_3 PF13625.6 NODE_80213_length_197_cov_2.246914_g72272_i0forward_frame_1 - 0.0015 18.7 0.0 0.0018 18.4 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PsbH PF00737.20 NODE_80210_length_197_cov_2.333333_g72269_i0reverse_frame_1 - 0.32 10.7 0.5 0.48 10.2 0.5 1.2 1 0 0 1 1 1 0 Photosystem II 10 kDa phosphoprotein Opiods_neuropep PF01160.18 NODE_80202_length_197_cov_2.413580_g72261_i0reverse_frame_1 - 0.17 12.0 3.4 0.2 11.8 1.8 1.8 1 1 1 2 2 2 0 Vertebrate endogenous opioids neuropeptide LRR_6 PF13516.6 NODE_80192_length_197_cov_2.672840_g72251_i0forward_frame_1 - 0.14 12.3 0.2 0.89 9.8 0.0 2.1 2 0 0 2 2 2 0 Leucine Rich repeat Pkinase PF00069.25 NODE_80187_length_197_cov_2.833333_g72246_i0reverse_frame_1 - 0.019 14.3 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain SNURF PF07192.11 NODE_80182_length_197_cov_2.938272_g72241_i0reverse_frame_1 - 0.046 13.6 0.2 0.063 13.1 0.2 1.2 1 0 0 1 1 1 0 SNURF/RPN4 protein Glyco_hydro_88 PF07470.13 NODE_80178_length_197_cov_3.191358_g72237_i0reverse_frame_1 - 0.15 11.1 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 ArAE_1 PF06081.11 NODE_80154_length_197_cov_20.135802_g72213_i0reverse_frame_1 - 0.32 11.1 5.2 0.35 11.0 5.2 1.1 1 0 0 1 1 1 0 Aromatic acid exporter family member 1 DUF4710 PF15828.5 NODE_80153_length_197_cov_20.506173_g72212_i0reverse_frame_1 - 0.042 14.0 4.2 0.053 13.6 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DUF3463 PF11946.8 NODE_80152_length_197_cov_21.944444_g72211_i0reverse_frame_1 - 0.017 14.9 0.1 0.02 14.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) WD40_alt PF14077.6 NODE_80150_length_197_cov_23.518519_g72209_i0forward_frame_1 - 0.061 13.2 0.6 0.08 12.8 0.6 1.3 1 0 0 1 1 1 0 Alternative WD40 repeat motif Chordopox_A30L PF06015.12 NODE_80149_length_197_cov_24.154321_g72208_i0reverse_frame_1 - 1.8 8.4 5.5 1.3 8.9 0.1 2.1 2 0 0 2 2 2 0 Chordopoxvirus A30L protein S1FA PF04689.13 NODE_80144_length_197_cov_27.259259_g72203_i0forward_frame_1 - 0.065 13.4 4.7 0.088 13.0 4.7 1.2 1 0 0 1 1 1 0 DNA binding protein S1FA FerB PF08150.12 NODE_80143_length_197_cov_27.290123_g72202_i0forward_frame_1 - 0.02 15.5 0.0 0.028 15.0 0.0 1.3 1 0 0 1 1 1 0 FerB (NUC096) domain DUF1847 PF08901.11 NODE_80141_length_197_cov_29.932099_g72200_i0reverse_frame_1 - 0.062 12.9 0.0 0.062 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1847) ATP_bind_3 PF01171.20 NODE_80140_length_197_cov_31.500000_g72199_i0reverse_frame_1 - 0.05 13.3 0.3 0.05 13.3 0.3 1.0 1 0 0 1 1 1 0 PP-loop family MORN PF02493.20 NODE_80138_length_197_cov_33.240741_g72197_i0reverse_frame_1 - 4.6e-13 48.2 8.9 4e-07 29.6 2.5 2.3 2 0 0 2 2 2 2 MORN repeat Tudor_2 PF18104.1 NODE_80138_length_197_cov_33.240741_g72197_i0reverse_frame_1 - 0.052 13.2 2.1 5.5 6.7 0.4 2.2 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain DUF2933 PF11666.8 NODE_80132_length_197_cov_40.308642_g72191_i0forward_frame_1 - 0.11 12.6 0.6 13 5.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2933) YpjP PF14005.6 NODE_80124_length_197_cov_46.432099_g72183_i0forward_frame_1 - 0.25 11.4 0.1 0.31 11.1 0.1 1.1 1 0 0 1 1 1 0 YpjP-like protein DUF4050 PF13259.6 NODE_80120_length_197_cov_48.666667_g72179_i0forward_frame_1 - 0.058 13.7 0.0 0.064 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) Phage_T7_tail PF03906.14 NODE_80110_length_197_cov_58.956790_g72169_i0forward_frame_1 - 0.14 11.8 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Phage T7 tail fibre protein YMF19 PF02326.15 NODE_80099_length_197_cov_78.425926_g72158_i0reverse_frame_1 - 0.018 15.8 0.1 0.022 15.5 0.1 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 DUF5331 PF17265.2 NODE_80094_length_197_cov_99.901235_g72153_i0forward_frame_1 - 0.098 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5331) MotB_plug PF13677.6 NODE_80090_length_197_cov_135.432099_g72149_i0forward_frame_1 - 0.14 11.7 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Membrane MotB of proton-channel complex MotA/MotB MORN PF02493.20 NODE_80089_length_197_cov_138.611111_g72148_i0reverse_frame_1 - 4.5e-08 32.5 8.1 1.1e-06 28.1 1.0 2.4 2 0 0 2 2 2 2 MORN repeat Cytomega_TRL10 PF06084.11 NODE_80088_length_197_cov_140.024691_g72147_i0reverse_frame_1 - 0.5 10.4 4.3 0.56 10.2 4.3 1.1 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein DUF1658 PF07871.11 NODE_80080_length_197_cov_291.759259_g72139_i0reverse_frame_1 - 0.76 9.8 3.9 3.2 7.9 2.2 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1658) DUF3678 PF12435.8 NODE_80080_length_197_cov_291.759259_g72139_i0forward_frame_1 - 0.55 9.6 3.8 0.22 10.9 1.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) UCR_Fe-S_N PF10399.9 NODE_80080_length_197_cov_291.759259_g72139_i0forward_frame_1 - 1.1 8.6 10.0 1 8.7 0.7 2.4 2 1 0 2 2 2 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ANAPC1 PF12859.7 NODE_80079_length_197_cov_495.574074_g72138_i0reverse_frame_1 - 0.17 12.4 1.3 0.2 12.3 0.7 1.4 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 1 HSP70 PF00012.20 NODE_80077_length_197_cov_28661.567901_g72136_i0forward_frame_1 - 0.0044 15.3 1.1 0.0051 15.1 1.1 1.0 1 0 0 1 1 1 1 Hsp70 protein B12-binding_2 PF02607.17 NODE_80077_length_197_cov_28661.567901_g72136_i0forward_frame_1 - 0.016 15.7 0.1 0.017 15.5 0.1 1.1 1 0 0 1 1 1 0 B12 binding domain DUF4795 PF16043.5 NODE_80077_length_197_cov_28661.567901_g72136_i0forward_frame_1 - 0.016 14.8 1.1 0.018 14.7 1.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF2501 PF10696.9 NODE_80066_length_198_cov_0.883436_g72125_i0reverse_frame_1 - 0.034 14.4 0.0 0.043 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2501) zf-C3HC4_4 PF15227.6 NODE_80066_length_198_cov_0.883436_g72125_i0forward_frame_1 - 0.0038 17.4 0.8 0.0052 16.9 0.8 1.2 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C2H2_4 PF13894.6 NODE_80064_length_198_cov_0.895706_g72123_i0forward_frame_1 - 0.24 12.3 0.3 0.24 12.3 0.3 2.1 2 1 0 2 2 2 0 C2H2-type zinc finger COMM_domain PF07258.14 NODE_80052_length_198_cov_0.969325_g72111_i0reverse_frame_1 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 COMM domain Androgen_recep PF02166.16 NODE_80049_length_198_cov_0.975460_g72108_i0reverse_frame_1 - 0.067 12.0 14.2 0.072 11.9 14.2 1.0 1 0 0 1 1 1 0 Androgen receptor Spt20 PF12090.8 NODE_80049_length_198_cov_0.975460_g72108_i0reverse_frame_1 - 0.87 9.2 14.9 0.84 9.2 14.9 1.1 1 0 0 1 1 1 0 Spt20 family Zip PF02535.22 NODE_80049_length_198_cov_0.975460_g72108_i0reverse_frame_1 - 8.2 5.5 5.5 9.7 5.3 5.5 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Lustrin_cystein PF14625.6 NODE_80048_length_198_cov_0.975460_g72107_i0reverse_frame_1 - 0.3 11.5 6.4 0.16 12.4 4.6 1.6 1 1 0 1 1 1 0 Lustrin, cysteine-rich repeated domain TRIQK PF15168.6 NODE_80041_length_198_cov_0.975460_g72100_i0forward_frame_1 - 0.021 14.7 0.5 0.021 14.7 0.5 1.6 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family Phage_P2_GpU PF06995.11 NODE_80040_length_198_cov_0.975460_g72099_i0forward_frame_1 - 0.073 12.7 0.0 0.081 12.5 0.0 1.1 1 0 0 1 1 1 0 Phage P2 GpU DUF4187 PF13821.6 NODE_80037_length_198_cov_0.981595_g72096_i0reverse_frame_1 - 0.0031 17.2 4.4 0.0043 16.8 4.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4187) SelP_C PF04593.14 NODE_80028_length_198_cov_0.981595_g72087_i0reverse_frame_1 - 0.045 13.7 2.2 0.048 13.6 2.2 1.0 1 0 0 1 1 1 0 Selenoprotein P, C terminal region EF_assoc_2 PF08356.12 NODE_80027_length_198_cov_0.981595_g72086_i0reverse_frame_1 - 0.12 12.4 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 EF hand associated Topo_C_assoc PF14370.6 NODE_80023_length_198_cov_0.981595_g72082_i0reverse_frame_1 - 0.12 12.3 0.0 0.17 11.8 0.0 1.3 1 1 0 1 1 1 0 C-terminal topoisomerase domain RVT_1 PF00078.27 NODE_80023_length_198_cov_0.981595_g72082_i0forward_frame_1 - 0.0027 17.3 0.0 0.0028 17.2 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) YafO_toxin PF13957.6 NODE_80017_length_198_cov_0.981595_g72076_i0reverse_frame_1 - 0.039 14.0 0.3 0.047 13.7 0.3 1.2 1 1 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system DASH_Duo1 PF08651.10 NODE_79999_length_198_cov_1.024540_g72058_i0reverse_frame_1 - 0.13 12.0 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 DASH complex subunit Duo1 Gal-bind_lectin PF00337.22 NODE_79977_length_198_cov_1.128834_g72036_i0forward_frame_1 - 0.18 11.3 0.0 0.2 11.2 0.0 1.0 1 0 0 1 1 1 0 Galactoside-binding lectin TRP PF06011.12 NODE_79963_length_198_cov_1.171779_g72022_i0reverse_frame_1 - 0.036 12.8 0.7 0.044 12.5 0.7 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel RabGAP-TBC PF00566.18 NODE_79961_length_198_cov_1.177914_g72020_i0reverse_frame_1 - 0.026 14.2 0.0 0.027 14.1 0.0 1.1 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Imm42 PF15593.6 NODE_79957_length_198_cov_1.208589_g72016_i0reverse_frame_1 - 0.079 13.4 0.1 0.079 13.4 0.1 1.1 1 0 0 1 1 1 0 Immunity protein 42 Toxin_6 PF05453.12 NODE_79948_length_198_cov_1.226994_g72007_i0reverse_frame_1 - 0.025 15.0 1.1 0.039 14.4 1.1 1.2 1 0 0 1 1 1 0 BmTXKS1/BmP02 toxin family MecA_N PF05223.11 NODE_79947_length_198_cov_1.226994_g72006_i0reverse_frame_1 - 0.0036 17.6 1.0 0.004 17.4 1.0 1.1 1 0 0 1 1 1 1 NTF2-like N-terminal transpeptidase domain AcetDehyd-dimer PF09290.11 NODE_79936_length_198_cov_1.288344_g71995_i0forward_frame_1 - 0.095 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic acetaldehyde dehydrogenase, dimerisation Deltaretro_Tax PF05599.11 NODE_79935_length_198_cov_1.294479_g71994_i0forward_frame_1 - 0.029 14.9 0.6 0.033 14.7 0.6 1.3 1 0 0 1 1 1 0 Deltaretrovirus Tax protein Lamprin PF06403.11 NODE_79934_length_198_cov_1.300613_g71993_i0reverse_frame_1 - 7.6e-06 25.9 1.4 8.8e-06 25.7 1.4 1.0 1 0 0 1 1 1 1 Lamprin zf-C2H2_11 PF16622.5 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 4.4e-07 29.5 0.5 2.1e-05 24.1 0.1 2.1 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_4 PF13894.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 8.3e-06 26.2 4.2 0.00039 21.0 0.2 2.3 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 9.9e-06 25.7 5.2 5.3e-05 23.4 0.2 2.2 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.0018 18.5 1.4 0.92 9.9 0.2 2.5 2 1 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.0023 17.9 3.1 0.0029 17.6 0.1 2.1 2 0 0 2 2 2 1 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.024 14.7 1.5 0.48 10.6 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain IL28A PF15177.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.041 13.7 0.3 0.049 13.5 0.3 1.1 1 0 0 1 1 1 0 Interleukin-28A zf-C2H2_3rep PF18868.1 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.054 14.2 2.3 0.48 11.1 0.2 2.0 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats FYDLN_acid PF09538.10 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.061 14.0 0.2 0.061 14.0 0.2 1.5 1 1 1 2 2 2 0 Protein of unknown function (FYDLN_acid) zf-C2HE PF16278.5 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.13 12.8 3.2 0.51 10.8 0.2 2.2 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-met PF12874.7 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.13 12.7 2.0 5.8 7.5 0.1 2.7 2 1 1 3 3 3 0 Zinc-finger of C2H2 type XPA_N PF01286.18 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.34 11.0 4.3 3.3 7.8 0.9 2.2 2 0 0 2 2 2 0 XPA protein N-terminal DUF2757 PF10955.8 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 0.4 11.0 3.2 3.1 8.1 0.2 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2757) zf-C2HC_2 PF13913.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 1.1 9.2 5.9 0.94 9.5 1.4 2.3 2 1 0 2 2 2 0 zinc-finger of a C2HC-type zf-H2C2_2 PF13465.6 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_1 - 2.6 8.6 5.7 7.3 7.2 0.1 3.0 3 0 0 3 3 3 0 Zinc-finger double domain DUF5510 PF17629.2 NODE_79928_length_198_cov_1.325153_g71987_i0reverse_frame_1 - 0.0067 16.3 1.2 0.0078 16.1 1.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5510) SF3b10 PF07189.11 NODE_79926_length_198_cov_1.337423_g71985_i0forward_frame_1 - 0.029 14.5 0.1 0.036 14.2 0.1 1.1 1 0 0 1 1 1 0 Splicing factor 3B subunit 10 (SF3b10) DUF4787 PF16029.5 NODE_79922_length_198_cov_1.361963_g71981_i0forward_frame_1 - 0.075 13.1 0.0 0.092 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4787) DUF5561 PF17716.1 NODE_79916_length_198_cov_1.404908_g71975_i0forward_frame_1 - 0.041 13.2 1.3 0.041 13.2 1.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5561) Baculo_F PF12259.8 NODE_79912_length_198_cov_1.423313_g71971_i0reverse_frame_1 - 0.017 13.6 0.7 0.019 13.5 0.7 1.0 1 0 0 1 1 1 0 Baculovirus F protein DUF1679 PF07914.11 NODE_79907_length_198_cov_1.441718_g71966_i0reverse_frame_1 - 0.23 10.3 0.0 0.25 10.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) DUF3295 PF11702.8 NODE_79898_length_198_cov_1.453988_g71957_i0reverse_frame_1 - 0.039 13.3 0.1 0.042 13.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) RWD PF05773.22 NODE_79897_length_198_cov_1.453988_g71956_i0forward_frame_1 - 2.9e-09 37.2 0.1 3.2e-09 37.1 0.1 1.1 1 0 0 1 1 1 1 RWD domain Rer1 PF03248.13 NODE_79883_length_198_cov_1.472393_g71942_i0forward_frame_1 - 0.09 12.5 1.9 0.1 12.4 1.9 1.1 1 0 0 1 1 1 0 Rer1 family DUF3920 PF13058.6 NODE_79880_length_198_cov_1.472393_g71939_i0reverse_frame_1 - 0.049 13.9 0.1 0.05 13.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3920) RVT_1 PF00078.27 NODE_79874_length_198_cov_1.472393_g71933_i0forward_frame_1 - 8.9e-06 25.4 0.0 9.3e-06 25.3 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) HCMVantigenic_N PF12154.8 NODE_79868_length_198_cov_1.515337_g71927_i0forward_frame_1 - 0.17 12.0 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Glycoprotein B N-terminal antigenic domain of HCMV YWFCY PF14293.6 NODE_79866_length_198_cov_1.521472_g71925_i0forward_frame_1 - 0.036 14.4 0.6 0.051 13.9 0.2 1.6 2 0 0 2 2 2 0 YWFCY protein NS3_envE PF02723.14 NODE_79865_length_198_cov_1.521472_g71924_i0reverse_frame_1 - 0.038 14.0 0.3 0.04 14.0 0.3 1.1 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E AZUL PF16558.5 NODE_79864_length_198_cov_1.533742_g71923_i0forward_frame_1 - 0.62 10.3 5.6 0.79 10.0 5.6 1.2 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A WD40 PF00400.32 NODE_79861_length_198_cov_1.546012_g71920_i0reverse_frame_1 - 0.0012 19.6 0.1 0.059 14.3 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat REC104 PF17378.2 NODE_79858_length_198_cov_1.558282_g71917_i0forward_frame_1 - 0.046 13.5 0.0 0.052 13.4 0.0 1.0 1 0 0 1 1 1 0 Meiotic recombination protein REC104 Importin_rep PF18773.1 NODE_79844_length_198_cov_1.638037_g71903_i0forward_frame_1 - 0.007 16.1 0.4 0.011 15.4 0.4 1.3 1 0 0 1 1 1 1 Importin 13 repeat ETRAMP PF09716.10 NODE_79840_length_198_cov_1.656442_g71899_i0forward_frame_1 - 0.14 12.3 0.4 0.16 12.0 0.4 1.0 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF1143 PF06608.11 NODE_79836_length_198_cov_1.693252_g71895_i0forward_frame_1 - 0.78 9.8 6.0 0.82 9.7 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) DUF5101 PF17031.5 NODE_79834_length_198_cov_1.699387_g71893_i0reverse_frame_1 - 0.079 13.1 0.1 0.092 12.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) Orf78 PF06024.12 NODE_79832_length_198_cov_1.705521_g71891_i0reverse_frame_1 - 0.13 12.6 0.9 0.15 12.4 0.9 1.1 1 0 0 1 1 1 0 Orf78 (ac78) DUF3432 PF11914.8 NODE_79818_length_198_cov_1.754601_g71877_i0forward_frame_1 - 0.056 13.7 7.6 0.061 13.6 7.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) Ashwin PF15323.6 NODE_79816_length_198_cov_1.773006_g71875_i0reverse_frame_1 - 0.095 12.7 0.0 0.095 12.7 0.0 1.1 1 0 0 1 1 1 0 Developmental protein Oest_recep PF02159.15 NODE_79815_length_198_cov_1.785276_g71874_i0reverse_frame_1 - 0.033 14.7 0.1 0.038 14.5 0.1 1.0 1 0 0 1 1 1 0 Oestrogen receptor Androgen_recep PF02166.16 NODE_79815_length_198_cov_1.785276_g71874_i0reverse_frame_1 - 2 7.2 8.9 2.2 7.0 8.9 1.0 1 0 0 1 1 1 0 Androgen receptor Cullin_Nedd8 PF10557.9 NODE_79813_length_198_cov_1.791411_g71872_i0forward_frame_1 - 0.013 15.6 0.5 0.017 15.2 0.5 1.2 1 0 0 1 1 1 0 Cullin protein neddylation domain TRAPPC-Trs85 PF12739.7 NODE_79813_length_198_cov_1.791411_g71872_i0forward_frame_1 - 0.13 11.2 0.3 0.14 11.1 0.3 1.0 1 0 0 1 1 1 0 ER-Golgi trafficking TRAPP I complex 85 kDa subunit Endothelin PF00322.17 NODE_79811_length_198_cov_1.803681_g71870_i0reverse_frame_1 - 0.02 14.5 2.0 0.05 13.2 2.0 1.7 1 0 0 1 1 1 0 Endothelin family CD34_antigen PF06365.12 NODE_79810_length_198_cov_1.809816_g71869_i0reverse_frame_1 - 0.036 13.6 0.1 0.036 13.6 0.1 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family PRC PF05239.16 NODE_79807_length_198_cov_1.834356_g71866_i0forward_frame_1 - 0.18 11.9 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 PRC-barrel domain SRCR PF00530.18 NODE_79798_length_198_cov_1.877301_g71857_i0forward_frame_1 - 0.073 13.6 0.2 0.091 13.3 0.2 1.2 1 0 0 1 1 1 0 Scavenger receptor cysteine-rich domain DNA_methylase PF00145.17 NODE_79795_length_198_cov_1.895706_g71854_i0reverse_frame_1 - 4.1e-08 32.9 0.0 4.5e-08 32.8 0.0 1.0 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase Ribonuc_red_lgN PF00317.21 NODE_79788_length_198_cov_1.938650_g71847_i0forward_frame_1 - 0.051 13.6 0.0 0.061 13.3 0.0 1.1 1 0 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain WCCH PF03716.14 NODE_79786_length_198_cov_1.944785_g71845_i0reverse_frame_1 - 0.035 13.8 4.9 0.035 13.8 4.9 1.9 2 0 0 2 2 2 0 WCCH motif Como_LCP PF02247.16 NODE_79786_length_198_cov_1.944785_g71845_i0reverse_frame_1 - 0.16 10.5 0.3 0.18 10.4 0.3 1.0 1 0 0 1 1 1 0 Large coat protein Arif-1 PF06770.11 NODE_79780_length_198_cov_1.957055_g71839_i0forward_frame_1 - 0.011 15.4 0.3 0.011 15.4 0.3 1.0 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) DUF3678 PF12435.8 NODE_79777_length_198_cov_1.963190_g71836_i0forward_frame_1 - 0.13 11.6 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) Siva PF05458.12 NODE_79751_length_198_cov_2.220859_g71810_i0reverse_frame_1 - 0.21 11.3 2.0 0.23 11.1 2.0 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) P63C PF10546.9 NODE_79746_length_198_cov_2.355828_g71805_i0reverse_frame_1 - 0.07 13.7 0.0 0.084 13.5 0.0 1.1 1 0 0 1 1 1 0 P63C domain Pkinase PF00069.25 NODE_79746_length_198_cov_2.355828_g71805_i0forward_frame_1 - 4e-13 49.3 0.0 4.2e-13 49.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_79746_length_198_cov_2.355828_g71805_i0forward_frame_1 - 4e-10 39.4 0.0 4e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase LCD1 PF09798.9 NODE_79739_length_198_cov_2.441718_g71798_i0reverse_frame_1 - 0.023 13.2 0.6 0.026 13.1 0.6 1.0 1 0 0 1 1 1 0 DNA damage checkpoint protein PPR_2 PF13041.6 NODE_79738_length_198_cov_2.441718_g71797_i0reverse_frame_1 - 3.2e-08 33.6 0.0 0.0011 19.1 0.0 2.0 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_79738_length_198_cov_2.441718_g71797_i0reverse_frame_1 - 0.002 18.1 0.0 0.0023 18.0 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 NODE_79738_length_198_cov_2.441718_g71797_i0reverse_frame_1 - 0.0024 18.0 0.1 0.01 16.0 0.0 1.8 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 NODE_79738_length_198_cov_2.441718_g71797_i0reverse_frame_1 - 0.011 15.4 0.0 0.021 14.5 0.0 1.5 2 0 0 2 2 2 0 PPR repeat Trigger_C PF05698.14 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.0023 17.9 1.0 0.0026 17.8 1.0 1.2 1 0 0 1 1 1 1 Bacterial trigger factor protein (TF) C-terminus FlaC_arch PF05377.11 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.0026 18.1 1.2 0.0031 17.9 1.2 1.2 1 0 0 1 1 1 1 Flagella accessory protein C (FlaC) LPP PF04728.13 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.004 17.5 0.7 0.0053 17.1 0.7 1.2 1 0 0 1 1 1 1 Lipoprotein leucine-zipper TolA_bind_tri PF16331.5 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.007 16.4 1.5 0.0088 16.1 1.5 1.2 1 0 0 1 1 1 1 TolA binding protein trimerisation NPV_P10 PF05531.12 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.0085 16.5 0.7 0.0098 16.3 0.7 1.2 1 0 0 1 1 1 1 Nucleopolyhedrovirus P10 protein Cep57_CLD_2 PF14197.6 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.012 15.6 0.1 0.025 14.6 0.1 1.5 1 1 1 2 2 2 0 Centrosome localisation domain of PPC89 CCDC92 PF14916.6 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.012 15.3 1.6 0.19 11.5 0.5 2.1 1 1 1 2 2 2 0 Coiled-coil domain of unknown function Sec34 PF04136.15 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.014 15.3 1.0 0.02 14.8 1.0 1.3 1 1 0 1 1 1 0 Sec34-like family bZIP_1 PF00170.21 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.023 14.8 0.4 0.039 14.1 0.4 1.3 1 0 0 1 1 1 0 bZIP transcription factor Fungal_TACC PF12709.7 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.024 15.0 1.5 0.049 14.1 1.5 1.5 1 1 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins CENP-H PF05837.12 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.027 14.9 0.5 0.028 14.8 0.5 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Spc24 PF08286.11 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.051 13.8 0.9 0.06 13.6 0.9 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DASH_Dad4 PF08650.10 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.053 13.5 0.3 0.067 13.2 0.3 1.1 1 0 0 1 1 1 0 DASH complex subunit Dad4 DivIC PF04977.15 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.084 12.7 2.1 0.11 12.3 2.1 1.4 1 1 0 1 1 1 0 Septum formation initiator SlyX PF04102.12 NODE_79735_length_198_cov_2.478528_g71794_i0forward_frame_1 - 0.093 13.4 1.3 0.14 12.8 1.3 1.4 1 1 0 1 1 1 0 SlyX TMEM239 PF15841.5 NODE_79731_length_198_cov_2.619632_g71790_i0forward_frame_1 - 0.0059 16.5 0.4 0.0064 16.4 0.4 1.0 1 0 0 1 1 1 1 Transmembrane protein 239 family HCMV_UL124 PF17609.2 NODE_79730_length_198_cov_2.693252_g71789_i0forward_frame_1 - 0.074 13.2 0.1 0.074 13.2 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function E1-E2_ATPase PF00122.20 NODE_79729_length_198_cov_2.699387_g71788_i0reverse_frame_1 - 0.16 11.5 0.1 0.18 11.3 0.1 1.0 1 0 0 1 1 1 0 E1-E2 ATPase DUF3527 PF12043.8 NODE_79728_length_198_cov_2.705521_g71787_i0reverse_frame_1 - 0.74 9.3 2.2 0.75 9.3 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3527) cNMP_binding PF00027.29 NODE_79722_length_198_cov_2.785276_g71781_i0reverse_frame_1 - 0.0022 18.0 0.0 0.0027 17.7 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF4201 PF13870.6 NODE_79722_length_198_cov_2.785276_g71781_i0reverse_frame_1 - 0.0027 17.5 0.0 0.0028 17.4 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) DUF5549 PF17703.1 NODE_79714_length_198_cov_2.981595_g71773_i0reverse_frame_1 - 0.085 12.5 1.9 0.098 12.3 1.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5549) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks410.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks410.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks410.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks410.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Toxin_2 PF00451.19 NODE_79712_length_198_cov_3.085890_g71771_i0forward_frame_1 - 0.62 10.4 4.8 0.24 11.7 2.5 1.5 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 ISK_Channel PF02060.15 NODE_79710_length_198_cov_3.355828_g71769_i0reverse_frame_1 - 0.06 13.1 0.3 0.064 13.0 0.3 1.2 1 0 0 1 1 1 0 Slow voltage-gated potassium channel AAA_8 PF12780.7 NODE_79709_length_198_cov_3.625767_g71768_i0forward_frame_1 - 0.12 11.6 1.2 0.15 11.3 1.2 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 Lipase_3 PF01764.25 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 1.3e-13 51.0 0.0 1.3e-13 51.0 0.0 1.0 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.017 14.9 0.0 0.018 14.8 0.0 1.1 1 0 0 1 1 1 0 PGAP1-like protein DUF676 PF05057.14 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.034 13.6 0.1 0.034 13.6 0.1 1.0 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Palm_thioest PF02089.15 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.057 13.2 0.0 0.059 13.2 0.0 1.0 1 0 0 1 1 1 0 Palmitoyl protein thioesterase Abhydrolase_6 PF12697.7 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.1 13.2 0.0 0.1 13.2 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_8 PF06259.12 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.11 12.1 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase DUF2974 PF11187.8 NODE_79705_length_198_cov_4.680982_g71764_i0forward_frame_1 - 0.14 11.7 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) DUF4617 PF15395.6 NODE_79703_length_198_cov_5.803681_g71762_i0reverse_frame_1 - 0.23 9.7 4.8 0.24 9.6 4.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4617) ScdA_N PF04405.14 NODE_79703_length_198_cov_5.803681_g71762_i0forward_frame_1 - 0.075 12.7 0.0 0.093 12.4 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) POM121 PF15229.6 NODE_79691_length_198_cov_26.147239_g71750_i0reverse_frame_1 - 0.0057 16.3 3.7 0.0061 16.2 3.7 1.1 1 0 0 1 1 1 1 POM121 family FixQ PF05545.11 NODE_79690_length_198_cov_26.453988_g71749_i0forward_frame_1 - 0.023 14.6 0.8 0.031 14.2 0.8 1.2 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Yippee-Mis18 PF03226.14 NODE_79684_length_198_cov_33.797546_g71743_i0reverse_frame_1 - 0.015 15.5 0.4 0.016 15.4 0.4 1.0 1 0 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly FTO_NTD PF12933.7 NODE_79678_length_198_cov_36.312883_g71737_i0reverse_frame_1 - 0.012 14.8 0.0 0.013 14.7 0.0 1.1 1 0 0 1 1 1 0 FTO catalytic domain UPF0239 PF06783.11 NODE_79677_length_198_cov_36.417178_g71736_i0forward_frame_1 - 0.059 13.6 0.7 0.069 13.3 0.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Acetyltransf_7 PF13508.7 NODE_79675_length_198_cov_37.638037_g71734_i0reverse_frame_1 - 0.16 12.4 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain IFRD PF05004.13 NODE_79674_length_198_cov_38.503067_g71733_i0forward_frame_1 - 0.0072 15.5 0.3 0.0082 15.3 0.3 1.0 1 0 0 1 1 1 1 Interferon-related developmental regulator (IFRD) SAMP PF05924.11 NODE_79672_length_198_cov_39.061350_g71731_i0forward_frame_1 - 0.78 9.1 5.3 2.4 7.5 5.3 1.8 1 1 0 1 1 1 0 SAMP Motif LAT PF15234.6 NODE_79670_length_198_cov_42.257669_g71729_i0reverse_frame_1 - 0.95 9.2 2.7 1 9.1 2.7 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells PhoPQ_related PF10142.9 NODE_79662_length_198_cov_47.122699_g71721_i0reverse_frame_1 - 0.05 12.3 0.1 0.056 12.1 0.1 1.0 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein V_ATPase_I PF01496.19 NODE_79662_length_198_cov_47.122699_g71721_i0forward_frame_1 - 5.2 4.9 6.1 5.7 4.7 6.1 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Transglut_core PF01841.19 NODE_79659_length_198_cov_54.907975_g71718_i0reverse_frame_1 - 0.12 12.8 0.1 0.12 12.8 0.1 1.2 1 0 0 1 1 1 0 Transglutaminase-like superfamily DNA_pol3_theta PF06440.11 NODE_79642_length_198_cov_80.662577_g71701_i0reverse_frame_1 - 0.077 12.7 0.1 0.094 12.4 0.1 1.4 1 1 0 1 1 1 0 DNA polymerase III, theta subunit TMEM101 PF15111.6 NODE_79641_length_198_cov_85.196319_g71700_i0reverse_frame_1 - 0.038 13.6 0.0 0.041 13.4 0.0 1.1 1 0 0 1 1 1 0 TMEM101 protein family TMEM251 PF15190.6 NODE_79641_length_198_cov_85.196319_g71700_i0reverse_frame_1 - 0.063 13.2 0.1 0.063 13.2 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 251 Ribosomal_S19 PF00203.21 NODE_79636_length_198_cov_95.711656_g71695_i0reverse_frame_1 - 1.7e-09 37.4 1.7 3.1e-09 36.6 0.1 1.9 2 0 0 2 2 2 1 Ribosomal protein S19 Merozoite_SPAM PF07133.11 NODE_79631_length_198_cov_144.030675_g71690_i0reverse_frame_1 - 8.1 6.4 30.7 8.5 6.3 30.7 1.0 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) Mx_ML PF17536.2 NODE_79629_length_198_cov_156.680982_g71688_i0reverse_frame_1 - 0.035 13.8 0.0 0.041 13.6 0.0 1.2 1 1 0 1 1 1 0 Matrix and Matrix long proteins N-terminal SAYSvFN PF10260.9 NODE_79623_length_198_cov_284.969325_g71682_i0reverse_frame_1 - 0.00066 19.6 0.1 0.0009 19.1 0.1 1.2 1 0 0 1 1 1 1 Uncharacterized conserved domain (SAYSvFN) MTCP1 PF08991.10 NODE_79622_length_198_cov_304.846626_g71681_i0reverse_frame_1 - 0.013 15.7 0.4 0.02 15.1 0.4 1.3 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type DNA_pol_viral_N PF00242.17 NODE_79612_length_198_cov_45371.496933_g71671_i0reverse_frame_1 - 7.4 6.0 9.6 8.1 5.8 9.6 1.0 1 0 0 1 1 1 0 DNA polymerase (viral) N-terminal domain Tail_spike_N PF18668.1 NODE_79609_length_199_cov_0.737805_g71668_i0reverse_frame_3 - 0.032 14.1 0.4 0.044 13.6 0.4 1.2 1 0 0 1 1 1 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain NinF PF05810.12 NODE_79607_length_199_cov_0.829268_g71666_i0reverse_frame_3 - 0.094 12.6 1.7 0.14 12.1 1.7 1.5 1 1 0 1 1 1 0 NinF protein DUF5122 PF17164.4 NODE_79606_length_199_cov_0.847561_g71665_i0forward_frame_3 - 0.004 17.4 0.0 0.009 16.3 0.0 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF5122) beta-propeller Perm-CXXC PF15629.6 NODE_79601_length_199_cov_0.957317_g71660_i0reverse_frame_3 - 0.0024 18.1 0.1 0.0024 18.1 0.1 2.0 2 0 0 2 2 2 1 Permuted single zf-CXXC unit HCMV_UL139 PF12507.8 NODE_79601_length_199_cov_0.957317_g71660_i0forward_frame_2 - 0.11 12.9 0.1 0.12 12.8 0.1 1.1 1 0 0 1 1 1 0 Human Cytomegalovirus UL139 protein DUF3485 PF11984.8 NODE_79600_length_199_cov_0.957317_g71659_i0reverse_frame_3 - 0.14 11.9 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3485) Dynein_IC2 PF11540.8 NODE_79598_length_199_cov_0.963415_g71657_i0reverse_frame_2 - 0.056 13.4 0.8 0.078 13.0 0.8 1.2 1 0 0 1 1 1 0 Cytoplasmic dynein 1 intermediate chain 2 Gag_p12 PF01141.18 NODE_79598_length_199_cov_0.963415_g71657_i0forward_frame_3 - 0.029 14.7 0.2 0.037 14.4 0.2 1.1 1 0 0 1 1 1 0 Gag polyprotein, inner coat protein p12 DUF1658 PF07871.11 NODE_79597_length_199_cov_0.963415_g71656_i0forward_frame_2 - 0.31 11.0 2.9 0.84 9.7 2.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1658) DUF3737 PF12541.8 NODE_79595_length_199_cov_0.969512_g71654_i0reverse_frame_3 - 0.054 12.7 0.7 0.057 12.6 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3737) SrfB PF07520.11 NODE_79589_length_199_cov_0.969512_g71648_i0forward_frame_3 - 0.071 11.0 0.2 0.075 10.9 0.2 1.0 1 0 0 1 1 1 0 Virulence factor SrfB GSHPx PF00255.19 NODE_79588_length_199_cov_0.969512_g71647_i0forward_frame_2 - 0.11 12.1 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Glutathione peroxidase Pox_A28 PF04584.14 NODE_79587_length_199_cov_0.969512_g71646_i0forward_frame_3 - 0.0017 18.6 0.1 0.0017 18.5 0.1 1.0 1 0 0 1 1 1 1 Poxvirus A28 family DUF4357 PF14267.6 NODE_79586_length_199_cov_0.975610_g71645_i0reverse_frame_3 - 0.12 12.3 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4357) DUF5407 PF17401.2 NODE_79586_length_199_cov_0.975610_g71645_i0forward_frame_2 - 0.091 13.0 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5407) Chordopox_G2 PF05796.12 NODE_79585_length_199_cov_0.975610_g71644_i0forward_frame_2 - 0.028 13.8 0.0 0.032 13.7 0.0 1.0 1 0 0 1 1 1 0 Chordopoxvirus protein G2 ERGIC_N PF13850.6 NODE_79579_length_199_cov_0.975610_g71638_i0reverse_frame_2 - 0.0077 16.6 0.2 0.0083 16.5 0.2 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DIE2_ALG10 PF04922.12 NODE_79577_length_199_cov_0.975610_g71636_i0forward_frame_3 - 0.14 11.4 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 DIE2/ALG10 family RHD_dimer PF16179.5 NODE_79576_length_199_cov_0.975610_g71635_i0forward_frame_2 - 0.11 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Rel homology dimerisation domain Utp21 PF04192.12 NODE_79575_length_199_cov_0.975610_g71634_i0reverse_frame_2 - 0.084 12.4 0.0 0.093 12.2 0.0 1.1 1 0 0 1 1 1 0 Utp21 specific WD40 associated putative domain DUF2145 PF09916.9 NODE_79574_length_199_cov_0.975610_g71633_i0reverse_frame_3 - 0.076 12.7 0.1 0.08 12.6 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2145) PyrI_C PF02748.15 NODE_79568_length_199_cov_0.975610_g71627_i0reverse_frame_3 - 0.0037 17.1 0.5 0.0059 16.5 0.5 1.4 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain Thioredoxin_3 PF13192.6 NODE_79567_length_199_cov_0.975610_g71626_i0reverse_frame_3 - 0.22 11.6 0.0 0.3 11.2 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin domain EELM2 PF15863.5 NODE_79564_length_199_cov_0.975610_g71623_i0reverse_frame_3 - 0.0051 17.0 0.3 0.0054 16.9 0.3 1.0 1 0 0 1 1 1 1 Extended EGL-27 and MTA1 homology domain Rad21_Rec8 PF04824.16 NODE_79562_length_199_cov_0.975610_g71621_i0reverse_frame_3 - 0.14 11.4 0.1 0.2 11.0 0.1 1.2 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein DUF4133 PF13571.6 NODE_79561_length_199_cov_0.975610_g71620_i0forward_frame_2 - 3.8 7.9 7.4 2.4 8.5 5.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4133) Z1 PF10593.9 NODE_79559_length_199_cov_0.975610_g71618_i0reverse_frame_3 - 1.3e-08 34.6 0.0 1.5e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Z1 domain MIT_LIKE_ACTX PF17556.2 NODE_79559_length_199_cov_0.975610_g71618_i0forward_frame_2 - 0.011 16.3 1.9 0.013 16.1 1.9 1.2 1 0 0 1 1 1 0 MIT-like atracotoxin family DUF3755 PF12579.8 NODE_79550_length_199_cov_0.975610_g71609_i0forward_frame_3 - 0.048 13.3 0.5 0.085 12.5 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3755) AAA_18 PF13238.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 6.3e-13 49.4 0.0 6.6e-13 49.3 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 1.3e-06 28.9 0.0 1.3e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 1.1e-05 25.8 0.1 1.5e-05 25.5 0.1 1.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.00012 22.3 0.0 0.00013 22.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.00031 20.7 0.3 0.00035 20.5 0.2 1.2 1 1 0 1 1 1 1 NTPase AAA_33 PF13671.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.00059 20.0 0.0 0.00059 20.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain ADK PF00406.22 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.00072 19.7 0.0 0.00076 19.6 0.0 1.2 1 0 0 1 1 1 1 Adenylate kinase ATP_bind_1 PF03029.17 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0014 18.5 0.2 0.0017 18.2 0.2 1.2 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0019 18.5 0.3 0.0022 18.3 0.2 1.3 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0055 16.8 0.0 0.0055 16.8 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0057 16.6 0.0 0.0068 16.3 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase Viral_helicase1 PF01443.18 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0072 16.1 0.0 0.0073 16.1 0.0 1.0 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0087 15.8 0.0 0.0087 15.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.0094 16.3 0.0 0.0094 16.3 0.0 1.2 1 0 0 1 1 1 1 RNA helicase AAA_16 PF13191.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.013 15.9 0.2 0.013 15.9 0.2 1.2 1 1 0 1 1 1 0 AAA ATPase domain KTI12 PF08433.10 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.014 14.8 0.0 0.014 14.8 0.0 1.1 1 0 0 1 1 1 0 Chromatin associated protein KTI12 MeaB PF03308.16 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.022 13.7 0.1 0.024 13.6 0.1 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.025 14.2 0.1 0.031 13.9 0.1 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NACHT PF05729.12 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.025 14.5 0.0 0.031 14.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_14 PF13173.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.027 14.5 0.0 0.031 14.3 0.0 1.1 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.027 13.8 0.0 0.029 13.7 0.0 1.2 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.03 14.1 0.0 0.03 14.1 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein ABC_tran PF00005.27 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.032 14.7 0.0 0.032 14.7 0.0 1.1 1 0 0 1 1 1 0 ABC transporter AAA_3 PF07726.11 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.035 14.0 0.0 0.044 13.6 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.037 13.8 0.0 0.044 13.5 0.0 1.2 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.037 14.0 0.0 0.038 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Septin PF00735.18 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.056 12.7 0.0 0.056 12.7 0.0 1.1 1 0 0 1 1 1 0 Septin Cytidylate_kin PF02224.18 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.066 12.9 0.0 0.066 12.9 0.0 1.1 1 0 0 1 1 1 0 Cytidylate kinase AAA_25 PF13481.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.076 12.6 0.3 0.083 12.5 0.3 1.3 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.078 13.0 0.5 0.12 12.4 0.2 1.5 1 1 1 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.09 11.8 0.0 0.097 11.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein PduV-EutP PF10662.9 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.099 12.4 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_26 PF13500.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.1 12.4 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.1 12.3 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain FeoB_N PF02421.18 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.11 12.0 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B Ploopntkinase3 PF18751.1 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.13 12.1 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_19 PF13245.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.14 12.5 0.6 0.17 12.2 0.6 1.2 1 1 0 1 1 1 0 AAA domain AAA_13 PF13166.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.14 10.7 0.0 0.15 10.6 0.0 1.0 1 0 0 1 1 1 0 AAA domain DnaB_C PF03796.15 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.16 11.3 0.0 0.16 11.3 0.0 1.2 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain AAA_30 PF13604.6 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.16 11.6 0.3 0.21 11.3 0.3 1.4 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.16 11.5 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ArsA_ATPase PF02374.15 NODE_79547_length_199_cov_0.975610_g71606_i0forward_frame_3 - 0.17 11.0 0.4 0.21 10.7 0.4 1.3 1 1 0 1 1 1 0 Anion-transporting ATPase Torsin PF06309.11 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_3 - 0.013 15.6 0.2 0.014 15.5 0.2 1.0 1 0 0 1 1 1 0 Torsin XhlA PF10779.9 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.0068 16.6 2.4 0.0097 16.1 2.4 1.2 1 0 0 1 1 1 1 Haemolysin XhlA SLATT_6 PF18169.1 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.025 14.2 1.3 0.03 13.9 1.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 zf-SAP30 PF13866.6 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.082 13.0 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 SAP30 zinc-finger SPECT1 PF18680.1 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.097 12.3 5.5 0.15 11.7 5.5 1.5 1 1 0 1 1 1 0 Plasmodium host cell traversal SPECT1 SH2_2 PF14633.6 NODE_79546_length_199_cov_0.975610_g71605_i0forward_frame_2 - 0.1 12.0 4.4 0.11 11.9 4.4 1.0 1 0 0 1 1 1 0 SH2 domain PCSK9_C2 PF18464.1 NODE_79544_length_199_cov_0.975610_g71603_i0reverse_frame_2 - 0.12 12.4 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Sigma54_activ_2 PF14532.6 NODE_79542_length_199_cov_0.975610_g71601_i0forward_frame_3 - 0.089 12.9 0.0 0.096 12.8 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain DUF348 PF03990.14 NODE_79540_length_199_cov_0.975610_g71599_i0forward_frame_3 - 0.23 11.3 0.0 0.31 10.8 0.0 1.2 1 0 0 1 1 1 0 G5-linked-Ubiquitin-like domain Lamp PF01299.17 NODE_79536_length_199_cov_0.975610_g71595_i0forward_frame_3 - 0.019 14.8 0.1 0.02 14.7 0.1 1.0 1 0 0 1 1 1 0 Lysosome-associated membrane glycoprotein (Lamp) He_PIG_assoc PF10632.9 NODE_79535_length_199_cov_0.975610_g71594_i0reverse_frame_3 - 0.18 11.5 0.2 0.18 11.5 0.2 1.8 3 0 0 3 3 3 0 He_PIG associated, NEW1 domain of bacterial glycohydrolase SelP_C PF04593.14 NODE_79531_length_199_cov_0.975610_g71590_i0forward_frame_2 - 0.068 13.2 0.5 0.074 13.0 0.5 1.1 1 0 0 1 1 1 0 Selenoprotein P, C terminal region Opi1 PF08618.10 NODE_79528_length_199_cov_0.981707_g71587_i0reverse_frame_3 - 0.14 11.4 0.0 0.14 11.3 0.0 1.0 1 0 0 1 1 1 0 Transcription factor Opi1 RskA PF10099.9 NODE_79528_length_199_cov_0.981707_g71587_i0reverse_frame_2 - 0.033 14.5 1.9 0.038 14.3 1.9 1.0 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF4131 PF13567.6 NODE_79528_length_199_cov_0.981707_g71587_i0forward_frame_2 - 0.13 11.9 0.4 0.14 11.8 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) CYTL1 PF15153.6 NODE_79527_length_199_cov_0.987805_g71586_i0forward_frame_2 - 0.083 12.8 0.0 0.098 12.6 0.0 1.1 1 0 0 1 1 1 0 Cytokine-like protein 1 GSHPx PF00255.19 NODE_79525_length_199_cov_0.993902_g71584_i0forward_frame_2 - 0.061 12.9 0.3 0.071 12.7 0.3 1.1 1 0 0 1 1 1 0 Glutathione peroxidase Circo_capsid PF02443.15 NODE_79522_length_199_cov_1.012195_g71581_i0forward_frame_3 - 8 6.0 12.8 8.3 5.9 12.8 1.1 1 0 0 1 1 1 0 Circovirus capsid protein TT_ORF1 PF02956.14 NODE_79522_length_199_cov_1.012195_g71581_i0forward_frame_3 - 9.2 4.8 13.5 9.1 4.8 13.5 1.0 1 0 0 1 1 1 0 TT viral orf 1 Toxin_2 PF00451.19 NODE_79520_length_199_cov_1.024390_g71579_i0reverse_frame_3 - 0.32 11.3 5.2 0.84 10.0 5.2 1.8 1 1 0 1 1 1 0 Scorpion short toxin, BmKK2 DUF1388 PF07142.12 NODE_79520_length_199_cov_1.024390_g71579_i0forward_frame_3 - 0.61 10.1 5.8 0.23 11.4 1.8 2.4 3 1 0 3 3 3 0 Repeat of unknown function (DUF1388) PNP_UDP_1 PF01048.20 NODE_79517_length_199_cov_1.030488_g71576_i0forward_frame_2 - 0.11 11.7 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Phosphorylase superfamily DUF5554 PF17709.1 NODE_79512_length_199_cov_1.060976_g71571_i0reverse_frame_3 - 0.084 13.0 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5554) MFS_1 PF07690.16 NODE_79512_length_199_cov_1.060976_g71571_i0forward_frame_3 - 0.00013 21.0 0.2 0.00014 20.9 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily RecR PF02132.15 NODE_79502_length_199_cov_1.103659_g71561_i0reverse_frame_3 - 1 9.0 9.6 2.2 7.9 6.3 2.2 2 0 0 2 2 2 0 RecR protein NOZZLE PF08744.10 NODE_79499_length_199_cov_1.121951_g71558_i0reverse_frame_3 - 0.041 13.4 3.1 0.045 13.3 3.1 1.0 1 0 0 1 1 1 0 Plant transcription factor NOZZLE Antimicrobial10 PF08105.11 NODE_79499_length_199_cov_1.121951_g71558_i0reverse_frame_2 - 0.3 11.2 2.7 0.41 10.7 0.1 2.1 2 1 0 2 2 2 0 Metchnikowin family BSMAP PF12280.8 NODE_79499_length_199_cov_1.121951_g71558_i0forward_frame_2 - 0.13 12.4 0.2 0.13 12.4 0.2 1.1 1 0 0 1 1 1 0 Brain specific membrane anchored protein Thymopoietin PF08198.11 NODE_79496_length_199_cov_1.146341_g71555_i0reverse_frame_3 - 0.00076 19.0 0.0 0.00094 18.7 0.0 1.2 1 0 0 1 1 1 1 Thymopoietin protein Dynactin_p62 PF05502.13 NODE_79494_length_199_cov_1.164634_g71553_i0forward_frame_3 - 0.22 10.3 0.0 0.24 10.1 0.0 1.0 1 0 0 1 1 1 0 Dynactin p62 family YopE PF03545.13 NODE_79492_length_199_cov_1.170732_g71551_i0reverse_frame_2 - 0.004 17.3 0.1 0.007 16.5 0.1 1.4 1 1 0 1 1 1 1 Yersinia virulence determinant (YopE) Metallothi_Euk2 PF12809.7 NODE_79491_length_199_cov_1.176829_g71550_i0reverse_frame_3 - 0.019 15.2 1.5 0.024 14.9 1.5 1.1 1 0 0 1 1 1 0 Eukaryotic metallothionein Herpes_pp85 PF04637.12 NODE_79491_length_199_cov_1.176829_g71550_i0forward_frame_3 - 0.042 12.3 0.8 0.049 12.1 0.8 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) DUF4131 PF13567.6 NODE_79491_length_199_cov_1.176829_g71550_i0forward_frame_3 - 0.06 13.0 1.6 0.063 12.9 1.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF1180 PF06679.12 NODE_79491_length_199_cov_1.176829_g71550_i0forward_frame_3 - 0.32 11.4 4.1 0.36 11.2 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) PX PF00787.24 NODE_79490_length_199_cov_1.195122_g71549_i0reverse_frame_3 - 0.051 13.6 0.1 0.057 13.4 0.1 1.2 1 0 0 1 1 1 0 PX domain MauJ PF17419.2 NODE_79489_length_199_cov_1.195122_g71548_i0reverse_frame_2 - 0.066 12.7 0.0 0.069 12.6 0.0 1.0 1 0 0 1 1 1 0 Methylamine utilization protein MauJ CRCB PF02537.15 NODE_79489_length_199_cov_1.195122_g71548_i0forward_frame_2 - 0.0018 18.5 0.3 0.002 18.4 0.3 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) DDE_Tnp_4 PF13359.6 NODE_79485_length_199_cov_1.207317_g71544_i0forward_frame_3 - 0.035 13.8 0.2 0.037 13.7 0.2 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease DUF4996 PF16387.5 NODE_79480_length_199_cov_1.213415_g71539_i0reverse_frame_2 - 0.082 13.4 0.3 0.089 13.3 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function Defensin_5 PF18251.1 NODE_79477_length_199_cov_1.219512_g71536_i0reverse_frame_3 - 0.006 16.6 3.2 0.0099 15.9 3.2 1.4 1 0 0 1 1 1 1 Fungal defensin Copsin EVC2_like PF12297.8 NODE_79477_length_199_cov_1.219512_g71536_i0reverse_frame_2 - 0.23 10.1 0.1 0.24 10.0 0.1 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Bunya_NS-S PF01104.17 NODE_79475_length_199_cov_1.219512_g71534_i0reverse_frame_3 - 0.079 12.8 0.1 0.1 12.4 0.1 1.3 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s PTS_EIIC PF02378.18 NODE_79475_length_199_cov_1.219512_g71534_i0forward_frame_3 - 0.00056 19.0 1.7 0.0006 18.9 1.7 1.0 1 0 0 1 1 1 1 Phosphotransferase system, EIIC MCPsignal PF00015.21 NODE_79473_length_199_cov_1.219512_g71532_i0forward_frame_3 - 0.018 14.9 0.1 0.019 14.8 0.1 1.1 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain L71 PF02448.15 NODE_79472_length_199_cov_1.219512_g71531_i0reverse_frame_3 - 0.085 13.3 0.1 0.12 12.8 0.1 1.2 1 1 0 1 1 1 0 L71 family DUF1016_N PF17761.1 NODE_79469_length_199_cov_1.219512_g71528_i0reverse_frame_2 - 0.088 13.0 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 DUF1016 N-terminal domain UIM PF02809.20 NODE_79468_length_199_cov_1.219512_g71527_i0forward_frame_3 - 0.06 13.3 0.1 0.084 12.8 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin interaction motif DUF5490 PF17593.2 NODE_79466_length_199_cov_1.225610_g71525_i0forward_frame_2 - 0.17 11.9 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5490) Peroxidase_ext PF11895.8 NODE_79465_length_199_cov_1.237805_g71524_i0reverse_frame_3 - 0.077 12.9 0.2 0.091 12.7 0.2 1.3 1 1 0 1 1 1 0 Fungal peroxidase extension region PDH_E1_M PF17831.1 NODE_79464_length_199_cov_1.243902_g71523_i0reverse_frame_2 - 1.8e-23 83.3 0.0 1.8e-23 83.3 0.0 1.0 1 0 0 1 1 1 1 Pyruvate dehydrogenase E1 component middle domain Phage_int_SAM_3 PF14659.6 NODE_79463_length_199_cov_1.243902_g71522_i0forward_frame_3 - 0.56 10.5 4.2 1 9.7 1.2 2.0 1 1 1 2 2 2 0 Phage integrase, N-terminal SAM-like domain UCR_hinge PF02320.16 NODE_79460_length_199_cov_1.274390_g71519_i0reverse_frame_2 - 0.038 14.2 0.2 0.055 13.7 0.2 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein CotJA PF11007.8 NODE_79459_length_199_cov_1.292683_g71518_i0reverse_frame_2 - 0.12 12.2 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Spore coat associated protein JA (CotJA) MARCKS PF02063.17 NODE_79457_length_199_cov_1.304878_g71516_i0reverse_frame_2 - 0.23 11.4 0.0 0.26 11.3 0.0 1.0 1 0 0 1 1 1 0 MARCKS family Herpes_BMRF2 PF04633.12 NODE_79455_length_199_cov_1.317073_g71514_i0reverse_frame_2 - 0.073 12.3 0.8 0.082 12.1 0.8 1.0 1 0 0 1 1 1 0 Herpesvirus BMRF2 protein Aconitase PF00330.20 NODE_79450_length_199_cov_1.335366_g71509_i0reverse_frame_3 - 9e-16 57.9 0.0 9.3e-16 57.9 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Imm8 PF15586.6 NODE_79444_length_199_cov_1.341463_g71503_i0reverse_frame_3 - 0.035 14.2 0.3 0.035 14.2 0.3 1.1 1 0 0 1 1 1 0 Immunity protein 8 DUF3213 PF11491.8 NODE_79444_length_199_cov_1.341463_g71503_i0reverse_frame_3 - 0.049 13.8 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3213) zf-RING_10 PF16685.5 NODE_79444_length_199_cov_1.341463_g71503_i0forward_frame_2 - 0.0037 17.4 2.9 0.0037 17.4 2.9 1.4 1 1 0 1 1 1 1 zinc RING finger of MSL2 TMEM43 PF07787.12 NODE_79441_length_199_cov_1.353659_g71500_i0forward_frame_3 - 0.5 9.7 2.6 0.48 9.8 2.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 ABC2_membrane_3 PF12698.7 NODE_79441_length_199_cov_1.353659_g71500_i0forward_frame_3 - 1.3 8.0 6.9 1.7 7.7 6.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Synthase_beta PF11421.8 NODE_79440_length_199_cov_1.353659_g71499_i0reverse_frame_2 - 1.1 10.1 5.1 0.78 10.5 3.3 1.7 1 1 1 2 2 2 0 ATP synthase F1 beta subunit zf-CW PF07496.15 NODE_79440_length_199_cov_1.353659_g71499_i0forward_frame_3 - 0.036 14.1 0.6 0.056 13.5 0.6 1.3 1 0 0 1 1 1 0 CW-type Zinc Finger HAGH_C PF16123.5 NODE_79435_length_199_cov_1.378049_g71494_i0forward_frame_2 - 0.11 13.0 0.1 0.17 12.4 0.1 1.3 1 0 0 1 1 1 0 Hydroxyacylglutathione hydrolase C-terminus Rax2 PF12768.7 NODE_79433_length_199_cov_1.390244_g71492_i0reverse_frame_2 - 0.0082 15.6 0.0 0.0083 15.6 0.0 1.1 1 0 0 1 1 1 1 Cortical protein marker for cell polarity PsbM PF05151.12 NODE_79433_length_199_cov_1.390244_g71492_i0reverse_frame_2 - 0.26 11.1 5.0 0.41 10.5 5.0 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre M protein (PsbM) DUF3149 PF11346.8 NODE_79433_length_199_cov_1.390244_g71492_i0reverse_frame_2 - 0.47 10.1 2.7 0.71 9.5 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) Cas_Cas4 PF01930.17 NODE_79432_length_199_cov_1.402439_g71491_i0forward_frame_3 - 0.14 12.2 0.0 0.15 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF83 Big_1 PF02369.16 NODE_79413_length_199_cov_1.463415_g71472_i0forward_frame_2 - 0.0017 18.4 0.0 0.0022 18.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 1) Prim_Zn_Ribbon PF08273.12 NODE_79411_length_199_cov_1.463415_g71470_i0reverse_frame_3 - 0.0089 16.3 0.0 0.014 15.7 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding domain of primase-helicase zf-RING_12 PF17976.1 NODE_79410_length_199_cov_1.463415_g71469_i0reverse_frame_3 - 0.42 10.9 5.2 0.15 12.3 2.9 1.5 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain ApoM PF11032.8 NODE_79408_length_199_cov_1.463415_g71467_i0forward_frame_3 - 0.023 14.4 0.0 0.025 14.2 0.0 1.0 1 0 0 1 1 1 0 ApoM domain MORN PF02493.20 NODE_79407_length_199_cov_1.463415_g71466_i0forward_frame_3 - 7.1e-16 57.1 13.4 7.2e-10 38.2 1.7 3.1 3 0 0 3 3 3 3 MORN repeat zf-C2H2_4 PF13894.6 NODE_79406_length_199_cov_1.463415_g71465_i0reverse_frame_3 - 0.063 14.1 0.7 4.5 8.4 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger UPF0547 PF10571.9 NODE_79406_length_199_cov_1.463415_g71465_i0reverse_frame_3 - 0.097 12.8 0.7 0.097 12.8 0.7 1.5 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF2543 PF10820.8 NODE_79402_length_199_cov_1.463415_g71461_i0reverse_frame_2 - 0.12 12.6 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2543) DUF4181 PF13789.6 NODE_79396_length_199_cov_1.469512_g71455_i0forward_frame_2 - 0.036 14.3 1.5 0.041 14.2 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) DUF2880 PF11082.8 NODE_79394_length_199_cov_1.481707_g71453_i0forward_frame_2 - 0.076 13.3 1.3 0.089 13.1 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2880) zf-DNA_Pol PF08996.10 NODE_79391_length_199_cov_1.487805_g71450_i0reverse_frame_2 - 0.078 12.7 2.5 0.086 12.6 2.5 1.0 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger DUF3433 PF11915.8 NODE_79390_length_199_cov_1.493902_g71449_i0reverse_frame_3 - 0.053 14.0 0.0 0.059 13.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3433) Nt_Gln_amidase PF09764.9 NODE_79384_length_199_cov_1.530488_g71443_i0reverse_frame_3 - 0.011 15.4 0.9 0.012 15.2 0.9 1.1 1 0 0 1 1 1 0 N-terminal glutamine amidase Anoctamin PF04547.12 NODE_79384_length_199_cov_1.530488_g71443_i0forward_frame_3 - 2.4e-20 72.8 10.2 2.7e-20 72.6 10.2 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel RSN1_7TM PF02714.15 NODE_79384_length_199_cov_1.530488_g71443_i0forward_frame_3 - 0.0045 16.4 5.5 0.005 16.2 5.5 1.1 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate Arm PF00514.23 NODE_79381_length_199_cov_1.536585_g71440_i0forward_frame_2 - 0.0089 16.0 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 Armadillo/beta-catenin-like repeat PMP1_2 PF08114.11 NODE_79381_length_199_cov_1.536585_g71440_i0forward_frame_2 - 0.088 12.6 0.2 0.14 12.0 0.2 1.3 1 0 0 1 1 1 0 ATPase proteolipid family Sarcolipin PF05366.11 NODE_79379_length_199_cov_1.554878_g71438_i0reverse_frame_2 - 0.018 14.7 0.3 0.034 13.9 0.3 1.5 1 0 0 1 1 1 0 Sarcolipin DUF4820 PF16091.5 NODE_79377_length_199_cov_1.560976_g71436_i0reverse_frame_3 - 6.8 6.0 6.9 7.4 5.9 6.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) DUF3413 PF11893.8 NODE_79377_length_199_cov_1.560976_g71436_i0forward_frame_2 - 0.015 14.5 2.3 0.017 14.3 2.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3413) DUF2270 PF10028.9 NODE_79376_length_199_cov_1.573171_g71435_i0reverse_frame_2 - 0.23 11.0 0.1 0.24 11.0 0.1 1.0 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2270) DUF2231 PF09990.9 NODE_79371_length_199_cov_1.615854_g71430_i0forward_frame_3 - 0.11 12.9 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Sel1 PF08238.12 NODE_79366_length_199_cov_1.640244_g71425_i0forward_frame_3 - 4.2e-08 33.6 1.0 8.1e-06 26.3 0.6 2.1 2 0 0 2 2 2 2 Sel1 repeat DUF3822 PF12864.7 NODE_79361_length_199_cov_1.664634_g71420_i0forward_frame_2 - 0.018 14.3 0.4 0.019 14.2 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3822) Rap1a PF18602.1 NODE_79361_length_199_cov_1.664634_g71420_i0forward_frame_2 - 0.15 12.4 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Rap1a immunity proteins DUF4716 PF15837.5 NODE_79359_length_199_cov_1.695122_g71418_i0reverse_frame_2 - 0.25 11.5 0.4 0.25 11.5 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4716) HTH_OrfB_IS605 PF12323.8 NODE_79357_length_199_cov_1.701220_g71416_i0reverse_frame_2 - 0.085 12.4 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain AKAP7_NLS PF10469.9 NODE_79355_length_199_cov_1.707317_g71414_i0reverse_frame_3 - 0.014 15.3 1.7 0.016 15.1 1.7 1.0 1 0 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain L_biotic_typeA PF04604.13 NODE_79355_length_199_cov_1.707317_g71414_i0forward_frame_3 - 0.22 11.4 3.9 0.35 10.7 3.9 1.3 1 0 0 1 1 1 0 Type-A lantibiotic Myb_DNA-binding PF00249.31 NODE_79354_length_199_cov_1.707317_g71413_i0forward_frame_2 - 1.2e-15 57.5 0.4 1.3e-15 57.3 0.4 1.1 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 NODE_79354_length_199_cov_1.707317_g71413_i0forward_frame_2 - 2.2e-06 27.5 0.1 2.3e-06 27.4 0.1 1.2 1 0 0 1 1 1 1 Myb DNA-binding like Myb_DNA-bind_6 PF13921.6 NODE_79354_length_199_cov_1.707317_g71413_i0forward_frame_2 - 7.6e-05 22.9 0.1 8e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 Myb-like DNA-binding domain Con-6 PF10346.9 NODE_79354_length_199_cov_1.707317_g71413_i0forward_frame_2 - 0.12 12.4 0.2 0.24 11.5 0.2 1.4 1 0 0 1 1 1 0 Conidiation protein 6 DUF1477 PF07346.11 NODE_79353_length_199_cov_1.719512_g71412_i0forward_frame_3 - 0.0046 17.2 0.1 0.0046 17.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1477) UPF0181 PF03701.14 NODE_79348_length_199_cov_1.768293_g71407_i0forward_frame_2 - 6.6e-14 51.3 1.4 8.1e-14 51.0 1.4 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0181) MTBP_N PF14918.6 NODE_79347_length_199_cov_1.768293_g71406_i0forward_frame_3 - 0.041 13.3 0.4 0.043 13.3 0.4 1.0 1 0 0 1 1 1 0 MDM2-binding Vta1_C PF18097.1 NODE_79347_length_199_cov_1.768293_g71406_i0forward_frame_3 - 0.15 11.7 0.2 4.4 7.1 0.2 2.1 2 0 0 2 2 2 0 Vta1 C-terminal domain DUF4219 PF13961.6 NODE_79344_length_199_cov_1.780488_g71403_i0forward_frame_3 - 0.039 13.6 0.9 0.056 13.1 0.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4219) DUF3719 PF12516.8 NODE_79342_length_199_cov_1.817073_g71401_i0forward_frame_3 - 0.24 11.1 1.7 0.32 10.7 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3719) cNMP_binding PF00027.29 NODE_79341_length_199_cov_1.817073_g71400_i0reverse_frame_3 - 1.3e-08 34.7 0.0 1.4e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Lambda_Bor PF06291.11 NODE_79341_length_199_cov_1.817073_g71400_i0reverse_frame_3 - 0.077 13.0 0.2 0.095 12.7 0.2 1.2 1 0 0 1 1 1 0 Bor protein DUF1077 PF06417.12 NODE_79341_length_199_cov_1.817073_g71400_i0reverse_frame_2 - 0.11 12.5 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) AmoC PF04896.12 NODE_79341_length_199_cov_1.817073_g71400_i0forward_frame_3 - 0.035 13.4 0.2 0.035 13.4 0.2 1.1 1 0 0 1 1 1 0 Ammonia monooxygenase/methane monooxygenase, subunit C Zn_ribbon_17 PF17120.5 NODE_79339_length_199_cov_1.823171_g71398_i0forward_frame_3 - 0.023 14.3 1.3 0.035 13.7 1.3 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type TPR_2 PF07719.17 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 1.4e-12 46.7 0.5 2.1e-06 27.4 0.4 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 1.4e-12 46.8 0.7 1.3e-06 27.9 0.4 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 2.7e-10 39.7 0.2 1.5e-05 24.6 0.1 2.0 1 1 1 2 2 2 2 TPR repeat TPR_8 PF13181.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 5.9e-08 32.3 0.2 0.00022 21.2 0.2 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 1.9e-06 28.0 0.4 9.4e-06 25.8 0.4 1.8 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 1.1e-05 25.1 0.1 0.075 13.1 0.2 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 3.1e-05 24.1 0.8 3.5e-05 23.9 0.8 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 5.5e-05 23.6 0.2 0.0048 17.4 0.0 1.9 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 8.3e-05 22.7 0.3 0.0026 18.0 0.2 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.0011 19.5 0.0 0.11 13.4 0.0 2.0 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.0021 18.6 0.0 0.0027 18.3 0.0 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.0036 17.8 0.0 2.1 9.1 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat FAT PF02259.23 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.06 12.6 0.1 0.072 12.3 0.1 1.0 1 0 0 1 1 1 0 FAT domain TPR_9 PF13371.6 NODE_79333_length_199_cov_1.865854_g71392_i0reverse_frame_3 - 0.094 12.9 0.1 1.1 9.4 0.0 1.9 1 1 1 2 2 2 0 Tetratricopeptide repeat P5-ATPase PF12409.8 NODE_79326_length_199_cov_1.896341_g71385_i0reverse_frame_2 - 0.18 11.9 2.3 0.24 11.5 2.1 1.3 1 1 0 1 1 1 0 P5-type ATPase cation transporter Ashwin PF15323.6 NODE_79323_length_199_cov_1.914634_g71382_i0reverse_frame_2 - 0.16 11.9 7.8 0.18 11.8 7.8 1.0 1 0 0 1 1 1 0 Developmental protein DDOST_48kD PF03345.14 NODE_79316_length_199_cov_1.945122_g71375_i0reverse_frame_3 - 1.5e-10 40.5 0.0 1.5e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 Oligosaccharyltransferase 48 kDa subunit beta DRE2_N PF16803.5 NODE_79316_length_199_cov_1.945122_g71375_i0reverse_frame_3 - 0.073 13.3 0.0 0.083 13.1 0.0 1.0 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus FGE-sulfatase PF03781.16 NODE_79315_length_199_cov_1.951220_g71374_i0reverse_frame_3 - 8.9e-05 22.2 0.0 9.5e-05 22.1 0.0 1.0 1 0 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DUF2064 PF09837.9 NODE_79307_length_199_cov_2.036585_g71366_i0reverse_frame_3 - 0.15 11.9 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2064) DUF1264 PF06884.11 NODE_79305_length_199_cov_2.042683_g71364_i0reverse_frame_3 - 0.023 14.3 0.1 0.027 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1264) Malic_M PF03949.15 NODE_79304_length_199_cov_2.054878_g71363_i0forward_frame_3 - 2.4e-26 92.6 0.1 2.5e-26 92.5 0.1 1.0 1 0 0 1 1 1 1 Malic enzyme, NAD binding domain Latrophilin PF02354.16 NODE_79302_length_199_cov_2.079268_g71361_i0reverse_frame_2 - 0.14 11.2 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 Latrophilin Cytoplasmic C-terminal region FeS PF04060.13 NODE_79299_length_199_cov_2.140244_g71358_i0reverse_frame_2 - 0.036 13.7 0.5 0.053 13.2 0.5 1.3 1 0 0 1 1 1 0 Putative Fe-S cluster RES PF08808.11 NODE_79299_length_199_cov_2.140244_g71358_i0forward_frame_3 - 0.21 11.5 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 RES domain NS3_envE PF02723.14 NODE_79294_length_199_cov_2.182927_g71353_i0reverse_frame_3 - 0.85 9.7 7.1 1.1 9.4 7.1 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Adeno_E3_14_5 PF04834.12 NODE_79292_length_199_cov_2.195122_g71351_i0reverse_frame_2 - 0.055 14.0 0.1 0.056 14.0 0.1 1.1 1 0 0 1 1 1 0 Early E3 14.5 kDa protein Gp_dh_N PF00044.24 NODE_79292_length_199_cov_2.195122_g71351_i0forward_frame_2 - 0.0019 18.5 0.1 0.0036 17.6 0.1 1.5 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DUF364 PF04016.12 NODE_79292_length_199_cov_2.195122_g71351_i0forward_frame_2 - 0.11 12.1 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Putative heavy-metal chelation YwpF PF14183.6 NODE_79291_length_199_cov_2.201220_g71350_i0forward_frame_2 - 0.12 12.4 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 YwpF-like protein CEP76-C2 PF15627.6 NODE_79289_length_199_cov_2.225610_g71348_i0forward_frame_2 - 0.14 11.7 0.5 0.17 11.5 0.5 1.1 1 0 0 1 1 1 0 CEP76 C2 domain CD225 PF04505.12 NODE_79288_length_199_cov_2.225610_g71347_i0reverse_frame_3 - 0.62 10.2 1.6 0.94 9.7 1.6 1.3 1 1 0 1 1 1 0 Interferon-induced transmembrane protein Toxin_35 PF10530.9 NODE_79286_length_199_cov_2.256098_g71345_i0reverse_frame_2 - 0.71 9.9 5.5 1.5 8.9 5.5 1.6 1 1 0 1 1 1 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks411.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks411.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks411.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks411.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:15 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF16 PF01519.16 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.0065 16.9 2.4 0.0071 16.8 2.4 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF16 LemA PF04011.12 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.02 14.7 0.9 0.023 14.5 0.9 1.0 1 0 0 1 1 1 0 LemA family PI3K_P85_iSH2 PF16454.5 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.024 14.3 1.7 0.027 14.1 1.7 1.2 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain SPAM PF02090.15 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.053 13.3 1.8 0.064 13.1 1.8 1.1 1 0 0 1 1 1 0 Salmonella surface presentation of antigen gene type M protein DUF2009 PF09418.10 NODE_79283_length_199_cov_2.268293_g71342_i0reverse_frame_2 - 0.094 11.8 0.7 0.094 11.8 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2009) Med20 PF08612.11 NODE_79282_length_199_cov_2.329268_g71341_i0reverse_frame_2 - 0.15 11.4 0.2 0.15 11.4 0.2 1.1 1 0 0 1 1 1 0 TATA-binding related factor (TRF) of subunit 20 of Mediator complex SEFIR PF08357.11 NODE_79280_length_199_cov_2.347561_g71339_i0reverse_frame_3 - 0.038 14.2 0.0 0.043 14.1 0.0 1.0 1 0 0 1 1 1 0 SEFIR domain EIN3 PF04873.13 NODE_79280_length_199_cov_2.347561_g71339_i0forward_frame_3 - 0.044 13.1 0.1 0.05 12.9 0.1 1.1 1 0 0 1 1 1 0 Ethylene insensitive 3 Ureide_permease PF07168.11 NODE_79276_length_199_cov_2.457317_g71335_i0reverse_frame_2 - 0.085 11.6 0.1 0.087 11.6 0.1 1.0 1 0 0 1 1 1 0 Ureide permease Phage_integrase PF00589.22 NODE_79275_length_199_cov_2.457317_g71334_i0forward_frame_2 - 6.9e-13 48.8 0.0 7.5e-13 48.6 0.0 1.0 1 0 0 1 1 1 1 Phage integrase family STAS PF01740.21 NODE_79272_length_199_cov_2.506098_g71331_i0reverse_frame_2 - 0.054 13.1 0.3 0.054 13.1 0.3 1.1 1 0 0 1 1 1 0 STAS domain RepA1_leader PF08048.12 NODE_79269_length_199_cov_2.603659_g71328_i0forward_frame_2 - 0.27 11.5 0.8 0.27 11.5 0.8 1.9 2 0 0 2 2 2 0 Tap RepA1 leader peptide LRR_1 PF00560.33 NODE_79259_length_199_cov_2.774390_g71318_i0reverse_frame_2 - 0.0072 16.7 0.1 0.39 11.5 0.0 2.4 2 0 0 2 2 2 1 Leucine Rich Repeat LRR_6 PF13516.6 NODE_79259_length_199_cov_2.774390_g71318_i0reverse_frame_2 - 0.11 12.6 1.2 5.6 7.3 0.1 2.3 2 0 0 2 2 2 0 Leucine Rich repeat PX PF00787.24 NODE_79259_length_199_cov_2.774390_g71318_i0forward_frame_3 - 1.8 8.6 4.4 5.3 7.1 0.4 2.0 1 1 1 2 2 2 0 PX domain Ephrin_rec_like PF07699.13 NODE_79253_length_199_cov_2.987805_g71312_i0reverse_frame_2 - 0.077 12.8 1.1 0.11 12.3 1.1 1.3 1 0 0 1 1 1 0 Putative ephrin-receptor like Sirohm_synth_C PF14823.6 NODE_79252_length_199_cov_3.006098_g71311_i0forward_frame_3 - 4.3 7.0 6.7 6.2 6.5 6.7 1.2 1 0 0 1 1 1 0 Sirohaem biosynthesis protein C-terminal Prp18 PF02840.15 NODE_79252_length_199_cov_3.006098_g71311_i0forward_frame_2 - 0.057 13.5 0.0 0.062 13.4 0.0 1.1 1 0 0 1 1 1 0 Prp18 domain T6SS_VipA PF05591.12 NODE_79252_length_199_cov_3.006098_g71311_i0forward_frame_2 - 0.065 13.0 0.1 0.077 12.8 0.1 1.1 1 0 0 1 1 1 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 Pkinase PF00069.25 NODE_79247_length_199_cov_3.140244_g71306_i0reverse_frame_2 - 2.5e-11 43.4 0.0 2.7e-11 43.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_79247_length_199_cov_3.140244_g71306_i0reverse_frame_2 - 0.00058 19.2 0.0 0.00065 19.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_79247_length_199_cov_3.140244_g71306_i0reverse_frame_2 - 0.0032 16.8 0.0 0.0035 16.7 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Alpha-E PF04168.12 NODE_79244_length_199_cov_3.262195_g71303_i0reverse_frame_3 - 0.073 12.8 0.0 0.073 12.8 0.0 1.0 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. Hepar_II_III PF07940.13 NODE_79243_length_199_cov_3.286585_g71302_i0reverse_frame_2 - 0.037 13.7 0.0 0.038 13.6 0.0 1.1 1 0 0 1 1 1 0 Heparinase II/III-like protein fn3 PF00041.21 NODE_79243_length_199_cov_3.286585_g71302_i0reverse_frame_2 - 0.045 14.1 0.0 0.052 13.9 0.0 1.1 1 0 0 1 1 1 0 Fibronectin type III domain Toxin_19 PF08088.12 NODE_79242_length_199_cov_3.304878_g71301_i0reverse_frame_2 - 0.13 12.4 0.2 0.13 12.4 0.2 2.1 2 0 0 2 2 2 0 Conotoxin I-superfamily Dynein_heavy PF03028.15 NODE_79240_length_199_cov_3.310976_g71299_i0forward_frame_3 - 0.088 12.9 0.2 0.1 12.7 0.2 1.0 1 0 0 1 1 1 0 Dynein heavy chain region D6 P-loop domain Transcrip_reg PF01709.20 NODE_79239_length_199_cov_3.420732_g71298_i0forward_frame_3 - 1.6e-10 40.9 0.1 1.6e-10 40.8 0.1 1.0 1 0 0 1 1 1 1 Transcriptional regulator DUF4025 PF13217.6 NODE_79238_length_199_cov_3.493902_g71297_i0reverse_frame_2 - 0.099 12.5 0.1 0.15 11.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4025) DUF3678 PF12435.8 NODE_79238_length_199_cov_3.493902_g71297_i0forward_frame_2 - 0.079 12.4 0.1 0.13 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) Rhabdo_ncap PF00945.18 NODE_79233_length_199_cov_4.457317_g71292_i0reverse_frame_3 - 0.064 12.1 0.1 0.071 12.0 0.1 1.0 1 0 0 1 1 1 0 Rhabdovirus nucleocapsid protein DUF1601 PF07671.11 NODE_79230_length_199_cov_5.341463_g71289_i0reverse_frame_3 - 0.052 13.4 0.1 0.089 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1601) FemAB PF02388.16 NODE_79230_length_199_cov_5.341463_g71289_i0forward_frame_3 - 0.54 9.1 4.8 0.58 9.0 4.8 1.0 1 0 0 1 1 1 0 FemAB family PHF5 PF03660.14 NODE_79227_length_199_cov_8.493902_g71286_i0forward_frame_2 - 0.063 13.5 0.2 0.076 13.2 0.2 1.1 1 0 0 1 1 1 0 PHF5-like protein PspA_IM30 PF04012.12 NODE_79220_length_199_cov_23.737805_g71279_i0reverse_frame_2 - 0.039 13.5 6.5 0.044 13.4 6.5 1.0 1 0 0 1 1 1 0 PspA/IM30 family CReP_N PF10472.9 NODE_79220_length_199_cov_23.737805_g71279_i0reverse_frame_2 - 0.35 9.7 3.2 0.39 9.5 3.2 1.0 1 0 0 1 1 1 0 eIF2-alpha phosphatase phosphorylation constitutive repressor DUF2951 PF11166.8 NODE_79220_length_199_cov_23.737805_g71279_i0reverse_frame_2 - 1.9 8.8 7.4 2.1 8.6 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2951) YajC PF02699.15 NODE_79217_length_199_cov_26.804878_g71276_i0reverse_frame_2 - 0.77 9.7 1.5 0.98 9.3 1.5 1.2 1 0 0 1 1 1 0 Preprotein translocase subunit Herpes_TAF50 PF03326.13 NODE_79217_length_199_cov_26.804878_g71276_i0forward_frame_2 - 0.042 12.5 0.7 0.043 12.5 0.7 1.0 1 0 0 1 1 1 0 Herpesvirus transcription activation factor (transactivator) SARAF PF06682.12 NODE_79216_length_199_cov_27.018293_g71275_i0reverse_frame_2 - 0.086 12.5 0.0 0.089 12.4 0.0 1.0 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis DUF1657 PF07870.11 NODE_79215_length_199_cov_27.487805_g71274_i0forward_frame_3 - 0.073 13.0 1.0 0.1 12.5 0.5 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1657) DUF1657 PF07870.11 NODE_79214_length_199_cov_27.640244_g71273_i0reverse_frame_3 - 0.0076 16.1 0.6 0.1 12.5 0.5 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF1657) DUF3313 PF11769.8 NODE_79214_length_199_cov_27.640244_g71273_i0reverse_frame_3 - 0.063 13.1 0.1 0.074 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3313) GTP_EFTU_D3 PF03143.17 NODE_79213_length_199_cov_29.018293_g71272_i0reverse_frame_3 - 0.046 14.0 1.0 0.069 13.5 0.6 1.4 1 1 1 2 2 2 0 Elongation factor Tu C-terminal domain Chordopox_A30L PF06015.12 NODE_79210_length_199_cov_29.219512_g71269_i0reverse_frame_2 - 0.4 10.5 7.1 0.55 10.1 7.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus A30L protein Anticodon_1 PF08264.13 NODE_79207_length_199_cov_32.597561_g71266_i0reverse_frame_3 - 0.12 12.4 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 Anticodon-binding domain of tRNA MPS-4 PF17523.2 NODE_79204_length_199_cov_33.743902_g71263_i0reverse_frame_3 - 0.24 11.5 7.4 0.5 10.5 7.4 1.7 1 1 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF1700 PF08006.11 NODE_79204_length_199_cov_33.743902_g71263_i0reverse_frame_2 - 0.65 9.5 6.0 0.69 9.4 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Nucleoside_tran PF01733.18 NODE_79202_length_199_cov_33.963415_g71261_i0forward_frame_3 - 0.00019 20.9 0.3 0.00021 20.8 0.3 1.1 1 0 0 1 1 1 1 Nucleoside transporter DUF2070 PF09843.9 NODE_79201_length_199_cov_35.353659_g71260_i0forward_frame_2 - 7.8 4.7 6.4 7.6 4.7 6.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Ldl_recept_a PF00057.18 NODE_79200_length_199_cov_35.396341_g71259_i0reverse_frame_3 - 0.013 15.7 0.2 0.02 15.1 0.2 1.2 1 0 0 1 1 1 0 Low-density lipoprotein receptor domain class A DUF3084 PF11283.8 NODE_79199_length_199_cov_35.487805_g71258_i0forward_frame_2 - 0.082 12.9 0.1 0.11 12.5 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3084) NFACT-C PF11923.8 NODE_79198_length_199_cov_36.036585_g71257_i0reverse_frame_3 - 0.18 11.7 0.1 0.23 11.4 0.1 1.2 1 0 0 1 1 1 0 NFACT protein C-terminal domain DUF555 PF04475.12 NODE_79195_length_199_cov_36.573171_g71254_i0forward_frame_2 - 0.054 13.8 0.1 0.066 13.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF555) Glycophorin_A PF01102.18 NODE_79192_length_199_cov_40.823171_g71251_i0forward_frame_2 - 0.09 13.0 0.1 0.09 13.0 0.1 1.2 1 0 0 1 1 1 0 Glycophorin A IMPa_N_2 PF18650.1 NODE_79191_length_199_cov_41.567073_g71250_i0reverse_frame_2 - 0.22 10.8 0.4 0.21 10.8 0.4 1.0 1 0 0 1 1 1 0 Immunomodulating metalloprotease N-terminal domain DUF3760 PF12586.8 NODE_79190_length_199_cov_42.841463_g71249_i0forward_frame_3 - 0.0084 16.3 1.0 0.015 15.4 1.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3760) DUF3791 PF12668.7 NODE_79186_length_199_cov_45.128049_g71245_i0reverse_frame_3 - 0.15 12.1 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3791) Hid1 PF12722.7 NODE_79186_length_199_cov_45.128049_g71245_i0forward_frame_3 - 1.1e-05 23.8 0.1 1.2e-05 23.7 0.1 1.0 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein Dymeclin PF09742.9 NODE_79186_length_199_cov_45.128049_g71245_i0forward_frame_3 - 0.0098 14.4 0.0 0.01 14.3 0.0 1.0 1 0 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein Herpes_UL14 PF03580.14 NODE_79185_length_199_cov_45.536585_g71244_i0forward_frame_2 - 0.024 14.9 0.4 0.024 14.9 0.4 1.1 1 0 0 1 1 1 0 Herpesvirus UL14-like protein DUF3683 PF12447.8 NODE_79185_length_199_cov_45.536585_g71244_i0forward_frame_2 - 0.046 13.8 0.2 0.048 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3683) Smr PF01713.21 NODE_79184_length_199_cov_47.713415_g71243_i0reverse_frame_3 - 7.3e-05 23.1 0.0 8.3e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Smr domain Reticulon PF02453.17 NODE_79180_length_199_cov_50.908537_g71239_i0forward_frame_2 - 0.0033 17.4 0.8 0.0037 17.2 0.8 1.0 1 0 0 1 1 1 1 Reticulon PfUIS3 PF11567.8 NODE_79176_length_199_cov_54.865854_g71235_i0reverse_frame_2 - 0.013 15.8 0.1 0.016 15.5 0.1 1.2 1 0 0 1 1 1 0 Plasmodium falciparum UIS3 membrane protein DUF5429 PF17494.2 NODE_79175_length_199_cov_55.445122_g71234_i0reverse_frame_3 - 0.009 16.0 0.1 0.011 15.8 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5429) DUF5325 PF17259.2 NODE_79170_length_199_cov_69.689024_g71229_i0forward_frame_3 - 0.16 11.8 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5325) Fer4_NifH PF00142.18 NODE_79168_length_199_cov_74.585366_g71227_i0forward_frame_3 - 0.065 12.7 0.0 0.077 12.4 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DUF2963 PF11178.8 NODE_79166_length_199_cov_79.335366_g71225_i0forward_frame_2 - 0.0059 16.3 1.6 0.0094 15.6 1.3 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF2963) Peptidase_M24_C PF16188.5 NODE_79164_length_199_cov_81.085366_g71223_i0forward_frame_3 - 0.02 15.0 0.3 0.027 14.5 0.3 1.3 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 SR-25 PF10500.9 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_3 - 0.029 14.0 10.5 0.033 13.8 10.5 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3128 PF11326.8 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_3 - 0.34 11.3 8.0 1.5 9.2 8.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3128) AP3D1 PF06375.11 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_2 - 0.88 9.8 8.1 1.1 9.5 8.1 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 SR-25 PF10500.9 NODE_79162_length_199_cov_93.365854_g71221_i0reverse_frame_2 - 2.4 7.7 14.5 2.7 7.5 14.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF1768 PF08719.11 NODE_79161_length_199_cov_94.939024_g71220_i0forward_frame_3 - 0.025 14.8 0.0 0.032 14.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1768) Cohesin_load PF10345.9 NODE_79157_length_199_cov_127.823171_g71216_i0forward_frame_3 - 0.067 11.6 0.9 0.074 11.5 0.9 1.0 1 0 0 1 1 1 0 Cohesin loading factor MRP-L46 PF11788.8 NODE_79154_length_199_cov_156.786585_g71213_i0reverse_frame_3 - 0.038 14.7 4.6 0.046 14.5 4.6 1.1 1 0 0 1 1 1 0 39S mitochondrial ribosomal protein L46 YolD PF08863.10 NODE_79154_length_199_cov_156.786585_g71213_i0reverse_frame_3 - 0.063 13.3 0.2 0.063 13.3 0.2 1.9 1 1 1 2 2 2 0 YolD-like protein Tricorn_C1 PF14684.6 NODE_79154_length_199_cov_156.786585_g71213_i0reverse_frame_3 - 0.081 13.0 0.2 0.1 12.7 0.2 1.1 1 0 0 1 1 1 0 Tricorn protease C1 domain Alpha_adaptin_C PF02296.16 NODE_79147_length_199_cov_4490.750000_g71206_i0reverse_frame_3 - 0.032 14.4 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain Peptidase_C70 PF12385.8 NODE_79146_length_199_cov_8057.378049_g71205_i0reverse_frame_2 - 2.2 8.3 4.6 2.8 7.9 4.6 1.3 1 1 0 1 1 1 0 Papain-like cysteine protease AvrRpt2 DUF3732 PF12532.8 NODE_79137_length_200_cov_0.896970_g71196_i0reverse_frame_2 - 0.024 14.2 0.1 0.024 14.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3732) DUF2014 PF09427.10 NODE_79137_length_200_cov_0.896970_g71196_i0forward_frame_2 - 0.12 11.7 0.7 0.11 11.8 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2014) Helicase_C PF00271.31 NODE_79136_length_200_cov_0.951515_g71195_i0reverse_frame_2 - 0.0011 19.3 0.0 0.0011 19.3 0.0 1.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain TMEM190 PF15431.6 NODE_79134_length_200_cov_0.951515_g71193_i0forward_frame_3 - 0.0082 16.3 2.5 0.009 16.2 2.5 1.1 1 0 0 1 1 1 1 Transmembrane protein 190 MepB PF08877.10 NODE_79133_length_200_cov_0.957576_g71192_i0reverse_frame_2 - 0.19 11.4 0.0 0.24 11.1 0.0 1.1 1 0 0 1 1 1 0 MepB protein DUF2975 PF11188.8 NODE_79132_length_200_cov_0.957576_g71191_i0reverse_frame_2 - 0.028 14.3 0.1 0.031 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) HTH_13 PF11972.8 NODE_79123_length_200_cov_0.963636_g71182_i0forward_frame_2 - 0.16 12.1 1.8 0.23 11.5 1.8 1.3 1 0 0 1 1 1 0 HTH DNA binding domain Toxin_31 PF08119.11 NODE_79119_length_200_cov_0.963636_g71178_i0forward_frame_3 - 3.2 7.6 6.3 13 5.6 6.3 1.9 1 1 0 1 1 1 0 Scorpion acidic alpha-KTx toxin family DUF3685 PF12452.8 NODE_79118_length_200_cov_0.963636_g71177_i0forward_frame_3 - 0.1 12.3 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) TRAM1 PF08390.11 NODE_79117_length_200_cov_0.963636_g71176_i0forward_frame_3 - 0.0084 15.7 0.0 0.009 15.6 0.0 1.1 1 0 0 1 1 1 1 TRAM1-like protein HemY_N PF07219.13 NODE_79116_length_200_cov_0.963636_g71175_i0reverse_frame_3 - 0.064 13.4 0.0 0.075 13.2 0.0 1.1 1 0 0 1 1 1 0 HemY protein N-terminus DEC-1_N PF04625.13 NODE_79116_length_200_cov_0.963636_g71175_i0reverse_frame_2 - 0.91 8.5 16.4 1 8.3 16.4 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DUF5525 PF17663.1 NODE_79116_length_200_cov_0.963636_g71175_i0reverse_frame_2 - 2.8 5.9 14.0 3.1 5.7 14.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) TonB_N PF16031.5 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_2 - 0.11 13.0 1.8 0.11 13.0 1.8 1.2 1 1 0 1 1 1 0 TonB polyproline region Pap_E4 PF02711.14 NODE_79116_length_200_cov_0.963636_g71175_i0forward_frame_2 - 3.5 8.7 7.3 4 8.5 7.3 1.1 1 0 0 1 1 1 0 E4 protein Prot_inhib_II PF02428.15 NODE_79113_length_200_cov_0.969697_g71172_i0forward_frame_3 - 0.14 12.6 5.4 0.19 12.2 5.4 1.3 1 1 0 1 1 1 0 Potato type II proteinase inhibitor family DUF5496 PF17600.2 NODE_79112_length_200_cov_0.969697_g71171_i0reverse_frame_3 - 0.0018 18.3 0.1 0.0019 18.2 0.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5496) Endothelin PF00322.17 NODE_79112_length_200_cov_0.969697_g71171_i0reverse_frame_2 - 0.1 12.2 0.6 0.1 12.2 0.6 1.6 2 0 0 2 2 2 0 Endothelin family Nepo_coat_N PF03689.15 NODE_79110_length_200_cov_0.969697_g71169_i0forward_frame_2 - 0.16 11.9 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain Abi_HHR PF07815.14 NODE_79109_length_200_cov_0.969697_g71168_i0reverse_frame_2 - 0.097 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Abl-interactor HHR zf-FCS PF06467.14 NODE_79107_length_200_cov_0.969697_g71166_i0reverse_frame_3 - 0.049 13.6 0.4 0.074 13.0 0.4 1.3 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif DUF4215 PF13948.6 NODE_79107_length_200_cov_0.969697_g71166_i0forward_frame_2 - 2e-07 31.3 2.6 2e-07 31.3 2.6 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4215) Metallothio PF00131.20 NODE_79107_length_200_cov_0.969697_g71166_i0forward_frame_2 - 0.052 13.7 10.2 0.069 13.3 10.2 1.1 1 0 0 1 1 1 0 Metallothionein zf-NADH-PPase PF09297.11 NODE_79100_length_200_cov_0.969697_g71159_i0reverse_frame_2 - 0.068 12.8 0.1 0.11 12.1 0.1 1.4 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain Trefoil PF00088.18 NODE_79099_length_200_cov_0.969697_g71158_i0reverse_frame_2 - 3.9 7.4 8.3 1.2e+02 2.6 7.8 2.2 1 1 0 1 1 1 0 Trefoil (P-type) domain FhuF_C PF11575.8 NODE_79098_length_200_cov_0.969697_g71157_i0reverse_frame_2 - 0.025 14.5 0.8 0.047 13.6 0.8 1.4 1 0 0 1 1 1 0 FhuF 2Fe-2S C-terminal domain Ephrin_rec_like PF07699.13 NODE_79097_length_200_cov_0.969697_g71156_i0reverse_frame_2 - 0.028 14.2 0.6 0.46 10.3 0.1 2.0 2 0 0 2 2 2 0 Putative ephrin-receptor like RHH_7 PF16777.5 NODE_79097_length_200_cov_0.969697_g71156_i0forward_frame_2 - 0.011 16.1 0.6 0.07 13.5 0.6 1.9 1 1 0 1 1 1 0 Transcriptional regulator, RHH-like, CopG DUF1534 PF07551.11 NODE_79095_length_200_cov_0.969697_g71154_i0reverse_frame_3 - 0.22 11.3 0.5 0.22 11.3 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1534) TPR_10 PF13374.6 NODE_79095_length_200_cov_0.969697_g71154_i0forward_frame_3 - 0.0064 16.3 0.0 0.017 15.0 0.0 1.7 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_79095_length_200_cov_0.969697_g71154_i0forward_frame_3 - 0.081 13.2 0.0 0.28 11.5 0.0 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF3611 PF12263.8 NODE_79092_length_200_cov_0.969697_g71151_i0reverse_frame_3 - 0.13 12.2 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) REV PF00424.18 NODE_79090_length_200_cov_0.969697_g71149_i0reverse_frame_2 - 0.055 13.5 0.1 0.057 13.4 0.1 1.1 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) ANP PF00212.18 NODE_79089_length_200_cov_0.969697_g71148_i0reverse_frame_3 - 0.0082 16.3 0.2 0.013 15.7 0.2 1.3 1 0 0 1 1 1 1 Atrial natriuretic peptide E2 PF08199.11 NODE_79088_length_200_cov_0.969697_g71147_i0reverse_frame_3 - 0.24 11.4 5.4 0.39 10.7 5.4 1.4 1 0 0 1 1 1 0 Bacteriophage E2-like protein OS-D PF03392.13 NODE_79086_length_200_cov_0.969697_g71145_i0forward_frame_2 - 0.022 14.8 0.4 0.024 14.7 0.4 1.1 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D Polyketide_cyc2 PF10604.9 NODE_79080_length_200_cov_0.969697_g71139_i0forward_frame_2 - 0.023 14.9 0.0 0.029 14.6 0.0 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport PI3K_p85B PF02192.16 NODE_79077_length_200_cov_1.036364_g71136_i0reverse_frame_3 - 0.072 12.8 0.1 0.096 12.4 0.1 1.2 1 0 0 1 1 1 0 PI3-kinase family, p85-binding domain DDHD PF02862.17 NODE_79075_length_200_cov_1.054545_g71134_i0reverse_frame_3 - 0.17 12.0 0.4 0.17 12.0 0.4 1.1 1 0 0 1 1 1 0 DDHD domain Leader_Erm PF08253.11 NODE_79073_length_200_cov_1.060606_g71132_i0reverse_frame_3 - 0.16 12.2 0.4 0.97 9.9 0.4 2.1 1 1 0 1 1 1 0 Erm Leader peptide IMUP PF15761.5 NODE_79071_length_200_cov_1.084848_g71130_i0forward_frame_2 - 1.1 10.0 9.5 1.3 9.8 9.5 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein AF-4 PF05110.13 NODE_79071_length_200_cov_1.084848_g71130_i0forward_frame_2 - 1.7 6.7 9.5 1.5 6.8 9.5 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein KIX_2 PF16987.5 NODE_79057_length_200_cov_1.151515_g71116_i0reverse_frame_3 - 0.19 11.8 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 KIX domain Ytp1 PF10355.9 NODE_79054_length_200_cov_1.187879_g71113_i0reverse_frame_3 - 0.07 12.3 0.0 0.089 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (Ytp1) DUF5480 PF17576.2 NODE_79051_length_200_cov_1.193939_g71110_i0reverse_frame_2 - 1.6 8.8 5.2 0.58 10.2 1.2 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5480) TFIIIC_sub6 PF10419.9 NODE_79050_length_200_cov_1.200000_g71109_i0forward_frame_2 - 0.04 13.8 0.0 0.044 13.7 0.0 1.1 1 0 0 1 1 1 0 TFIIIC subunit triple barrel domain GMP_PDE_delta PF05351.11 NODE_79048_length_200_cov_1.206061_g71107_i0forward_frame_2 - 0.19 11.8 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 GMP-PDE, delta subunit Phage_Coat_A PF05357.13 NODE_79040_length_200_cov_1.212121_g71099_i0reverse_frame_3 - 0.062 13.1 0.1 0.082 12.7 0.1 1.2 1 0 0 1 1 1 0 Phage Coat Protein A DUF2304 PF10066.9 NODE_79037_length_200_cov_1.212121_g71096_i0reverse_frame_3 - 0.061 13.6 1.3 0.067 13.4 1.3 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) PhoLip_ATPase_N PF16209.5 NODE_79027_length_200_cov_1.272727_g71086_i0reverse_frame_2 - 0.17 11.6 2.3 0.23 11.1 2.3 1.4 1 1 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal DUF4396 PF14342.6 NODE_79025_length_200_cov_1.284848_g71084_i0forward_frame_2 - 0.26 11.6 3.1 0.15 12.4 1.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4396) DUF1801 PF08818.11 NODE_79024_length_200_cov_1.284848_g71083_i0reverse_frame_2 - 0.22 12.1 0.0 0.22 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DU1801) Colipase-like PF15083.6 NODE_79023_length_200_cov_1.290909_g71082_i0reverse_frame_3 - 0.011 15.8 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 0 Colipase-like SK_channel PF03530.14 NODE_79022_length_200_cov_1.290909_g71081_i0reverse_frame_2 - 0.081 12.9 0.2 0.097 12.7 0.2 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel protein_MS5 PF04776.12 NODE_79022_length_200_cov_1.290909_g71081_i0reverse_frame_2 - 0.12 12.5 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein MS5 NT5C PF06941.12 NODE_79017_length_200_cov_1.315152_g71076_i0forward_frame_2 - 0.0038 17.1 0.0 0.0045 16.9 0.0 1.0 1 0 0 1 1 1 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Hormone_5 PF00184.17 NODE_79015_length_200_cov_1.321212_g71074_i0reverse_frame_2 - 0.43 11.4 6.3 0.47 11.3 6.3 1.0 1 0 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain DUF5375 PF17345.2 NODE_79015_length_200_cov_1.321212_g71074_i0forward_frame_2 - 0.068 13.1 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5375) Organ_specific PF10950.8 NODE_79014_length_200_cov_1.339394_g71073_i0forward_frame_2 - 0.02 15.6 0.3 0.027 15.2 0.3 1.2 1 0 0 1 1 1 0 Organ specific protein Imm21 PF15589.6 NODE_79013_length_200_cov_1.345455_g71072_i0forward_frame_2 - 0.026 14.6 0.0 0.33 11.0 0.0 1.9 1 1 1 2 2 2 0 Immunity protein 21 Cys_Met_Meta_PP PF01053.20 NODE_79011_length_200_cov_1.351515_g71070_i0reverse_frame_2 - 0.051 12.1 0.0 0.056 12.0 0.0 1.0 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Pro_CA PF00484.19 NODE_79006_length_200_cov_1.381818_g71065_i0reverse_frame_2 - 1.4e-12 48.2 0.1 1.5e-12 48.0 0.1 1.0 1 0 0 1 1 1 1 Carbonic anhydrase AtuA PF07287.11 NODE_79006_length_200_cov_1.381818_g71065_i0reverse_frame_2 - 0.029 13.1 0.1 0.034 12.8 0.1 1.0 1 0 0 1 1 1 0 Acyclic terpene utilisation family protein AtuA PTS_EIIA_2 PF00359.22 NODE_79005_length_200_cov_1.381818_g71064_i0reverse_frame_3 - 1.8e-09 37.6 0.0 2e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Imm17 PF15562.6 NODE_79000_length_200_cov_1.400000_g71059_i0forward_frame_2 - 0.042 13.7 0.1 0.05 13.5 0.1 1.1 1 0 0 1 1 1 0 Immunity protein 17 HapK PF11639.8 NODE_78998_length_200_cov_1.418182_g71057_i0forward_frame_3 - 0.04 14.4 0.0 0.047 14.2 0.0 1.1 1 0 0 1 1 1 0 REDY-like protein HapK VitD-bind_III PF09164.10 NODE_78997_length_200_cov_1.436364_g71056_i0reverse_frame_2 - 0.039 13.9 0.7 0.049 13.6 0.7 1.2 1 0 0 1 1 1 0 Vitamin D binding protein, domain III BCDHK_Adom3 PF10436.9 NODE_78993_length_200_cov_1.442424_g71052_i0forward_frame_3 - 0.15 11.9 0.0 0.18 11.7 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase P_C PF06640.11 NODE_78990_length_200_cov_1.442424_g71049_i0forward_frame_2 - 0.08 13.1 2.5 0.082 13.0 2.5 1.0 1 0 0 1 1 1 0 P protein C-terminus LktC PF06261.11 NODE_78987_length_200_cov_1.448485_g71046_i0reverse_frame_3 - 0.017 15.1 1.1 0.018 14.9 1.1 1.0 1 0 0 1 1 1 0 Actinobacillus actinomycetemcomitans leukotoxin activator LktC Tax PF02959.16 NODE_78980_length_200_cov_1.454545_g71039_i0reverse_frame_2 - 0.056 12.9 0.1 0.056 12.9 0.1 1.1 1 0 0 1 1 1 0 HTLV Tax DUF2065 PF09838.9 NODE_78975_length_200_cov_1.454545_g71034_i0reverse_frame_2 - 0.21 11.7 0.2 0.3 11.1 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2065) Metallothio_11 PF02066.15 NODE_78974_length_200_cov_1.454545_g71033_i0reverse_frame_3 - 0.062 13.5 4.1 0.076 13.2 4.1 1.1 1 0 0 1 1 1 0 Metallothionein family 11 Peptidase_C36 PF05415.11 NODE_78970_length_200_cov_1.454545_g71029_i0reverse_frame_3 - 0.079 13.2 0.1 0.086 13.1 0.1 1.1 1 0 0 1 1 1 0 Beet necrotic yellow vein furovirus-type papain-like endopeptidase 7TM_GPCR_Srab PF10292.9 NODE_78967_length_200_cov_1.454545_g71026_i0forward_frame_3 - 0.005 15.8 0.8 0.0056 15.6 0.8 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR receptor class ab chemoreceptor Antimicrobial_4 PF08024.11 NODE_78965_length_200_cov_1.490909_g71024_i0forward_frame_2 - 0.1 12.7 1.2 0.17 11.9 1.2 1.3 1 0 0 1 1 1 0 Ant antimicrobial peptide LST1 PF05083.13 NODE_78962_length_200_cov_1.503030_g71021_i0reverse_frame_3 - 0.021 15.1 0.3 0.025 14.9 0.3 1.2 1 0 0 1 1 1 0 LST-1 protein Rota_VP2 PF05087.12 NODE_78960_length_200_cov_1.521212_g71019_i0reverse_frame_2 - 1.2 7.2 3.8 1.3 7.1 3.8 1.0 1 0 0 1 1 1 0 Rotavirus VP2 protein KLRAQ PF10205.9 NODE_78960_length_200_cov_1.521212_g71019_i0forward_frame_3 - 0.031 14.5 2.5 0.034 14.4 2.5 1.0 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein DivIVA PF05103.13 NODE_78960_length_200_cov_1.521212_g71019_i0forward_frame_3 - 0.036 14.1 2.5 0.049 13.7 2.5 1.2 1 0 0 1 1 1 0 DivIVA protein Ran-binding PF05508.11 NODE_78960_length_200_cov_1.521212_g71019_i0forward_frame_3 - 0.077 12.0 2.2 0.079 11.9 2.2 1.0 1 0 0 1 1 1 0 RanGTP-binding protein DUF383 PF04063.14 NODE_78956_length_200_cov_1.551515_g71015_i0reverse_frame_3 - 0.072 12.8 0.8 0.1 12.3 0.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF383) DUF2971 PF11185.8 NODE_78956_length_200_cov_1.551515_g71015_i0reverse_frame_3 - 0.074 14.2 1.6 0.085 14.0 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2971) Carb_bind PF10645.9 NODE_78953_length_200_cov_1.563636_g71012_i0forward_frame_2 - 0.0023 18.1 0.7 0.0035 17.5 0.7 1.3 1 1 0 1 1 1 1 Carbohydrate binding EndIII_4Fe-2S PF10576.9 NODE_78953_length_200_cov_1.563636_g71012_i0forward_frame_2 - 0.13 12.6 0.7 0.13 12.6 0.7 1.9 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III DUF2650 PF10853.8 NODE_78952_length_200_cov_1.569697_g71011_i0forward_frame_2 - 0.0052 16.5 1.4 0.0087 15.8 1.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2650) NADHdh-2_N PF12155.8 NODE_78951_length_200_cov_1.569697_g71010_i0reverse_frame_3 - 0.063 13.7 0.4 0.07 13.5 0.4 1.1 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 N-terminal Flavi_propep PF01570.17 NODE_78951_length_200_cov_1.569697_g71010_i0forward_frame_3 - 0.022 14.7 0.2 0.026 14.5 0.2 1.1 1 0 0 1 1 1 0 Flavivirus polyprotein propeptide ICAP-1_inte_bdg PF10480.9 NODE_78948_length_200_cov_1.587879_g71007_i0reverse_frame_3 - 0.06 13.3 0.0 0.063 13.3 0.0 1.1 1 0 0 1 1 1 0 Beta-1 integrin binding protein Tudor_3 PF18115.1 NODE_78945_length_200_cov_1.600000_g71004_i0forward_frame_2 - 0.063 13.1 0.1 0.12 12.3 0.1 1.5 1 1 0 1 1 1 0 DNA repair protein Crb2 Tudor domain DUF2203 PF09969.9 NODE_78945_length_200_cov_1.600000_g71004_i0forward_frame_2 - 0.082 13.6 1.6 0.11 13.2 1.6 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) zf-C2H2_9 PF16293.5 NODE_78942_length_200_cov_1.618182_g71001_i0reverse_frame_2 - 0.11 12.4 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) DUF222 PF02720.17 NODE_78942_length_200_cov_1.618182_g71001_i0forward_frame_3 - 0.0094 15.5 0.2 0.0094 15.5 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF222) DUF1392 PF07154.11 NODE_78938_length_200_cov_1.630303_g70997_i0reverse_frame_3 - 0.002 18.3 0.1 0.0021 18.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1392) YaaC PF14175.6 NODE_78937_length_200_cov_1.636364_g70996_i0forward_frame_3 - 0.091 12.0 0.1 0.091 12.0 0.1 1.0 1 0 0 1 1 1 0 YaaC-like Protein DUF5310 PF17237.2 NODE_78934_length_200_cov_1.648485_g70993_i0reverse_frame_3 - 0.079 12.8 1.5 0.13 12.2 1.5 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5310) Shugoshin_N PF07558.11 NODE_78934_length_200_cov_1.648485_g70993_i0forward_frame_3 - 0.015 15.2 0.9 0.021 14.7 0.9 1.3 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region CBM49 PF09478.10 NODE_78933_length_200_cov_1.660606_g70992_i0reverse_frame_2 - 0.068 13.5 0.0 0.1 12.9 0.0 1.3 1 1 0 1 1 1 0 Carbohydrate binding domain CBM49 CPV_Polyhedrin PF17515.2 NODE_78933_length_200_cov_1.660606_g70992_i0forward_frame_2 - 0.11 11.8 0.3 0.12 11.7 0.3 1.0 1 0 0 1 1 1 0 Cypovirus polyhedrin Yop-YscD_cpl PF16697.5 NODE_78927_length_200_cov_1.690909_g70986_i0reverse_frame_3 - 0.048 14.0 0.0 0.054 13.8 0.0 1.2 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain Med9 PF07544.13 NODE_78926_length_200_cov_1.690909_g70985_i0reverse_frame_3 - 0.013 15.6 1.6 0.02 15.0 1.6 1.3 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 Snapin_Pallidin PF14712.6 NODE_78926_length_200_cov_1.690909_g70985_i0reverse_frame_3 - 0.023 15.1 1.5 0.033 14.6 1.3 1.4 1 1 0 1 1 1 0 Snapin/Pallidin Spo12 PF05032.12 NODE_78926_length_200_cov_1.690909_g70985_i0reverse_frame_3 - 0.86 9.6 3.5 2.7 8.0 0.2 2.5 2 1 0 2 2 2 0 Spo12 family PSK_trans_fac PF07704.11 NODE_78925_length_200_cov_1.690909_g70984_i0forward_frame_2 - 0.03 15.1 1.7 0.035 14.9 1.7 1.2 1 0 0 1 1 1 0 Rv0623-like transcription factor Spem1 PF15670.5 NODE_78925_length_200_cov_1.690909_g70984_i0forward_frame_2 - 0.14 11.7 0.1 0.14 11.7 0.1 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 DUF1582 PF07621.11 NODE_78924_length_200_cov_1.690909_g70983_i0forward_frame_3 - 0.025 14.5 1.0 0.041 13.8 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1582) DUF2018 PF09442.10 NODE_78921_length_200_cov_1.696970_g70980_i0reverse_frame_2 - 0.094 13.7 1.1 0.1 13.6 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2018) Pet127 PF08634.10 NODE_78919_length_200_cov_1.696970_g70978_i0forward_frame_3 - 0.14 11.5 0.6 0.14 11.6 0.6 1.1 1 0 0 1 1 1 0 Mitochondrial protein Pet127 SPOB_ab PF14682.6 NODE_78916_length_200_cov_1.709091_g70975_i0reverse_frame_2 - 0.084 13.0 0.0 0.089 12.9 0.0 1.1 1 0 0 1 1 1 0 Sporulation initiation phospho-transferase B, C-terminal Connexin43 PF03508.13 NODE_78914_length_200_cov_1.715152_g70973_i0reverse_frame_3 - 0.045 13.3 0.5 0.069 12.7 0.5 1.2 1 0 0 1 1 1 0 Gap junction alpha-1 protein (Cx43) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks412.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks412.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks412.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks412.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:36:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1272 PF06906.11 NODE_78907_length_200_cov_1.806061_g70966_i0reverse_frame_2 - 3 8.0 4.6 18 5.5 0.0 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) Complex1_49kDa PF00346.19 NODE_78906_length_200_cov_1.830303_g70965_i0forward_frame_3 - 5.4e-18 65.0 0.0 5.8e-18 65.0 0.0 1.0 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DUF5316 PF17247.2 NODE_78903_length_200_cov_1.848485_g70962_i0forward_frame_2 - 0.03 14.3 0.0 0.034 14.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5316) DUF561 PF04481.12 NODE_78902_length_200_cov_1.872727_g70961_i0forward_frame_2 - 0.0088 15.2 0.1 0.01 15.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF561) TMEM154 PF15102.6 NODE_78901_length_200_cov_1.872727_g70960_i0reverse_frame_3 - 0.088 12.7 0.8 0.12 12.3 0.8 1.2 1 0 0 1 1 1 0 TMEM154 protein family HSL_N PF06350.12 NODE_78899_length_200_cov_1.890909_g70958_i0forward_frame_2 - 0.079 11.9 0.0 0.09 11.7 0.0 1.0 1 0 0 1 1 1 0 Hormone-sensitive lipase (HSL) N-terminus RE_SinI PF09570.10 NODE_78898_length_200_cov_1.896970_g70957_i0reverse_frame_3 - 0.11 11.7 0.1 0.12 11.6 0.1 1.1 1 0 0 1 1 1 0 SinI restriction endonuclease Brr6_like_C_C PF10104.9 NODE_78897_length_200_cov_1.909091_g70956_i0reverse_frame_2 - 0.075 12.8 0.6 0.088 12.6 0.6 1.2 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain Swm2 PF17083.5 NODE_78896_length_200_cov_1.909091_g70955_i0forward_frame_2 - 0.064 13.3 2.1 0.074 13.1 2.1 1.0 1 0 0 1 1 1 0 Nucleolar protein Swm2 TRP PF06011.12 NODE_78895_length_200_cov_1.909091_g70954_i0forward_frame_2 - 0.036 12.8 0.4 0.036 12.8 0.4 1.0 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Tmemb_cc2 PF10267.9 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.0094 15.1 7.5 0.01 15.0 7.5 1.0 1 0 0 1 1 1 1 Predicted transmembrane and coiled-coil 2 protein Phage_Mu_Gam PF07352.12 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.0096 15.8 9.7 0.01 15.7 9.7 1.0 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein S6OS1 PF15676.5 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.01 14.4 5.2 0.011 14.3 5.2 1.0 1 0 0 1 1 1 0 Six6 opposite strand transcript 1 family TPR_MLP1_2 PF07926.12 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.011 15.8 8.8 0.012 15.7 8.8 1.0 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF3584 PF12128.8 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.018 12.6 6.0 0.017 12.7 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) PMEI PF04043.15 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.079 13.3 0.3 0.085 13.2 0.3 1.0 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor DUF4140 PF13600.6 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.3 11.5 3.7 0.46 11.0 3.7 1.4 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF4337 PF14235.6 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 0.31 11.1 6.4 0.35 11.0 6.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DivIC PF04977.15 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 1.3 8.9 10.6 0.18 11.6 3.1 2.0 1 1 1 2 2 2 0 Septum formation initiator FemAB PF02388.16 NODE_78894_length_200_cov_1.909091_g70953_i0forward_frame_3 - 1.3 7.8 8.1 1.5 7.6 8.1 1.0 1 0 0 1 1 1 0 FemAB family Ran_BP1 PF00638.18 NODE_78889_length_200_cov_1.927273_g70948_i0forward_frame_3 - 0.084 13.1 0.5 0.097 12.9 0.5 1.0 1 0 0 1 1 1 0 RanBP1 domain Laminin_EGF PF00053.24 NODE_78889_length_200_cov_1.927273_g70948_i0forward_frame_2 - 2.4e-05 24.4 5.4 3.8e-05 23.7 5.4 1.5 1 1 0 1 1 1 1 Laminin EGF domain ATP-synt_ab PF00006.25 NODE_78888_length_200_cov_1.927273_g70947_i0reverse_frame_2 - 2.3e-07 30.7 0.0 2.3e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain SapB_2 PF03489.17 NODE_78888_length_200_cov_1.927273_g70947_i0forward_frame_3 - 0.086 13.0 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Saposin-like type B, region 2 TarS_C1 PF18674.1 NODE_78885_length_200_cov_1.933333_g70944_i0reverse_frame_3 - 0.019 14.9 0.4 0.021 14.7 0.4 1.1 1 0 0 1 1 1 0 TarS beta-glycosyltransferase C-terminal domain 1 CHCH PF06747.13 NODE_78882_length_200_cov_1.933333_g70941_i0reverse_frame_3 - 0.1 12.8 0.2 0.1 12.8 0.2 1.9 2 1 0 2 2 2 0 CHCH domain Pkinase PF00069.25 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 3.1e-16 59.5 0.1 3.6e-16 59.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 6.5e-09 35.4 0.0 6.5e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 0.0047 16.9 0.2 0.0055 16.6 0.2 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 0.042 12.8 0.0 0.042 12.8 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Pkinase_fungal PF17667.1 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 0.048 12.4 0.0 0.054 12.3 0.0 1.0 1 0 0 1 1 1 0 Fungal protein kinase Spin-Ssty PF02513.17 NODE_78874_length_200_cov_1.963636_g70933_i0forward_frame_2 - 0.14 11.9 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Spin/Ssty Family Zein-binding PF04576.15 NODE_78869_length_200_cov_2.012121_g70928_i0forward_frame_2 - 0.013 15.7 0.1 0.014 15.7 0.1 1.1 1 0 0 1 1 1 0 Zein-binding Pet191_N PF10203.9 NODE_78863_length_200_cov_2.103030_g70922_i0reverse_frame_3 - 0.01 16.1 5.2 0.015 15.6 5.2 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein PET191 Fer4_2 PF12797.7 NODE_78863_length_200_cov_2.103030_g70922_i0reverse_frame_2 - 0.039 14.0 0.7 7.9 6.8 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Bac_rhamnosid6H PF17389.2 NODE_78861_length_200_cov_2.109091_g70920_i0reverse_frame_3 - 0.056 12.7 0.1 0.069 12.4 0.1 1.0 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain GCHY-1 PF02649.14 NODE_78857_length_200_cov_2.139394_g70916_i0reverse_frame_3 - 0.042 13.4 0.0 0.043 13.3 0.0 1.1 1 0 0 1 1 1 0 Type I GTP cyclohydrolase folE2 MFS_1 PF07690.16 NODE_78856_length_200_cov_2.163636_g70915_i0forward_frame_2 - 0.0015 17.6 3.4 0.0016 17.5 3.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily UNC-79 PF14776.6 NODE_78855_length_200_cov_2.175758_g70914_i0reverse_frame_3 - 0.081 11.7 0.0 0.081 11.7 0.0 1.0 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 TFIIF_beta PF02270.15 NODE_78855_length_200_cov_2.175758_g70914_i0reverse_frame_3 - 0.12 12.5 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 TFIIF, beta subunit HTH domain Glyco_hydro_31 PF01055.26 NODE_78854_length_200_cov_2.181818_g70913_i0reverse_frame_2 - 4.6e-17 62.4 0.2 4.8e-17 62.3 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 TMEM237 PF15383.6 NODE_78851_length_200_cov_2.193939_g70910_i0reverse_frame_2 - 0.12 11.4 0.6 0.13 11.3 0.6 1.1 1 0 0 1 1 1 0 Transmembrane protein 237 p47_phox_C PF08944.11 NODE_78848_length_200_cov_2.327273_g70907_i0forward_frame_3 - 0.005 16.2 0.2 0.0075 15.7 0.2 1.3 1 0 0 1 1 1 1 NADPH oxidase subunit p47Phox, C terminal domain CD36 PF01130.21 NODE_78844_length_200_cov_2.369697_g70903_i0forward_frame_3 - 0.1 11.1 0.3 0.11 11.0 0.3 1.0 1 0 0 1 1 1 0 CD36 family KilA-N PF04383.13 NODE_78843_length_200_cov_2.393939_g70902_i0reverse_frame_2 - 1.7 8.5 9.0 4 7.3 0.2 2.2 1 1 1 2 2 2 0 KilA-N domain DUF4512 PF14975.6 NODE_78843_length_200_cov_2.393939_g70902_i0reverse_frame_2 - 4.8 8.0 6.3 1.1e+02 3.6 6.0 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4512) JmjN PF02375.17 NODE_78839_length_200_cov_2.406061_g70898_i0forward_frame_2 - 0.00013 21.9 0.0 0.00018 21.4 0.0 1.2 1 0 0 1 1 1 1 jmjN domain CNOT1_TTP_bind PF16417.5 NODE_78839_length_200_cov_2.406061_g70898_i0forward_frame_2 - 0.0046 16.2 0.0 0.0054 15.9 0.0 1.0 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain Androgen_recep PF02166.16 NODE_78837_length_200_cov_2.478788_g70896_i0reverse_frame_2 - 0.37 9.6 4.5 0.4 9.5 4.5 1.0 1 0 0 1 1 1 0 Androgen receptor DUF4709 PF15821.5 NODE_78835_length_200_cov_2.636364_g70894_i0reverse_frame_2 - 0.011 16.0 0.5 0.013 15.8 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4709) Na_Ca_ex PF01699.24 NODE_78834_length_200_cov_2.642424_g70893_i0reverse_frame_2 - 5.5e-12 45.9 2.6 6e-12 45.8 2.6 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein SVM_signal PF12113.8 NODE_78833_length_200_cov_2.660606_g70892_i0reverse_frame_2 - 0.02 14.8 1.6 0.031 14.2 1.6 1.3 1 0 0 1 1 1 0 SVM protein signal sequence CAMSAP_CKK PF08683.11 NODE_78833_length_200_cov_2.660606_g70892_i0forward_frame_3 - 0.062 13.4 0.0 0.069 13.3 0.0 1.1 1 0 0 1 1 1 0 Microtubule-binding calmodulin-regulated spectrin-associated APC_u15 PF16636.5 NODE_78831_length_200_cov_2.672727_g70890_i0reverse_frame_3 - 0.065 13.7 0.9 0.07 13.6 0.9 1.1 1 0 0 1 1 1 0 Unstructured region on APC between APC_crr regions 5 and 6 YqzL PF14006.6 NODE_78828_length_200_cov_2.993939_g70887_i0forward_frame_3 - 0.14 12.6 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 YqzL-like protein EF_TS PF00889.19 NODE_78823_length_200_cov_3.321212_g70882_i0forward_frame_3 - 1.2e-16 61.0 0.6 1.2e-16 61.0 0.6 1.0 1 0 0 1 1 1 1 Elongation factor TS Borrelia_rep PF03183.13 NODE_78822_length_200_cov_3.345455_g70881_i0reverse_frame_2 - 2.5 8.3 6.3 0.86 9.7 0.4 2.7 3 0 0 3 3 3 0 Borrelia repeat protein MtlR PF05068.12 NODE_78820_length_200_cov_3.618182_g70879_i0forward_frame_3 - 3.5e-22 79.2 0.0 3.6e-22 79.1 0.0 1.0 1 0 0 1 1 1 1 Mannitol repressor DUF5603 PF18231.1 NODE_78815_length_200_cov_17.624242_g70874_i0forward_frame_3 - 0.039 14.3 0.0 0.042 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5603) Dpoe2NT PF12213.8 NODE_78815_length_200_cov_17.624242_g70874_i0forward_frame_2 - 0.068 13.5 0.7 0.086 13.1 0.7 1.2 1 0 0 1 1 1 0 DNA polymerases epsilon N terminal RSN1_TM PF13967.6 NODE_78811_length_200_cov_27.121212_g70870_i0reverse_frame_2 - 0.062 13.1 0.5 0.06 13.1 0.5 1.1 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport DUF2538 PF10804.8 NODE_78806_length_200_cov_29.909091_g70865_i0reverse_frame_3 - 0.022 14.5 0.1 0.026 14.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2538) Peptidase_U32 PF01136.19 NODE_78805_length_200_cov_31.084848_g70864_i0forward_frame_2 - 0.14 11.3 0.1 0.15 11.2 0.1 1.0 1 0 0 1 1 1 0 Peptidase family U32 DUF3043 PF11241.8 NODE_78802_length_200_cov_32.903030_g70861_i0forward_frame_3 - 0.038 14.0 0.0 0.041 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF2781 PF10914.8 NODE_78792_length_200_cov_43.593939_g70851_i0forward_frame_3 - 0.14 12.5 1.4 0.18 12.2 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) Wzy_C PF04932.15 NODE_78791_length_200_cov_44.921212_g70850_i0forward_frame_3 - 6.9 6.3 8.7 7.9 6.1 8.7 1.1 1 0 0 1 1 1 0 O-Antigen ligase Baculo_p24 PF05073.12 NODE_78791_length_200_cov_44.921212_g70850_i0forward_frame_2 - 0.24 11.2 1.1 0.27 11.0 1.1 1.1 1 0 0 1 1 1 0 Baculovirus P24 capsid protein PRKCSH PF07915.13 NODE_78788_length_200_cov_49.266667_g70847_i0forward_frame_2 - 0.094 13.7 0.0 0.13 13.3 0.0 1.2 1 0 0 1 1 1 0 Glucosidase II beta subunit-like protein ETRAMP PF09716.10 NODE_78784_length_200_cov_51.703030_g70843_i0reverse_frame_2 - 0.099 12.7 0.1 0.13 12.4 0.1 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Cadherin_C_2 PF16492.5 NODE_78781_length_200_cov_55.739394_g70840_i0reverse_frame_2 - 0.016 16.0 0.3 0.018 15.8 0.3 1.2 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal DUF3357 PF11837.8 NODE_78781_length_200_cov_55.739394_g70840_i0reverse_frame_2 - 0.039 14.4 0.6 0.039 14.4 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) EphA2_TM PF14575.6 NODE_78781_length_200_cov_55.739394_g70840_i0reverse_frame_2 - 0.05 14.5 0.3 0.056 14.3 0.3 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Phycoerythr_ab PF02972.14 NODE_78778_length_200_cov_61.200000_g70837_i0reverse_frame_3 - 0.38 10.6 2.8 19 5.2 2.8 2.3 1 1 0 1 1 1 0 Phycoerythrin, alpha/beta chain Clusterin PF01093.17 NODE_78778_length_200_cov_61.200000_g70837_i0reverse_frame_2 - 1.1 8.2 6.4 1.2 8.2 6.4 1.0 1 0 0 1 1 1 0 Clusterin zf-C2HE PF16278.5 NODE_78775_length_200_cov_62.696970_g70834_i0forward_frame_3 - 0.046 14.2 0.2 0.061 13.8 0.2 1.2 1 0 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger YrhC PF14143.6 NODE_78773_length_200_cov_66.327273_g70832_i0reverse_frame_2 - 0.11 12.6 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 YrhC-like protein Sugar_tr PF00083.24 NODE_78773_length_200_cov_66.327273_g70832_i0forward_frame_3 - 0.018 13.9 0.0 0.02 13.8 0.0 1.1 1 0 0 1 1 1 0 Sugar (and other) transporter TMF_DNA_bd PF12329.8 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.0017 18.3 8.1 0.0021 18.0 8.1 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding ABC_tran_CTD PF16326.5 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.003 17.8 2.2 0.0037 17.5 2.2 1.1 1 0 0 1 1 1 1 ABC transporter C-terminal domain SlyX PF04102.12 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.007 17.0 0.9 0.0089 16.6 0.9 1.1 1 0 0 1 1 1 1 SlyX DUF2730 PF10805.8 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.0088 16.1 1.8 0.011 15.8 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2730) Nsp1_C PF05064.13 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.024 14.5 2.4 0.026 14.3 2.4 1.1 1 0 0 1 1 1 0 Nsp1-like C-terminal region PKcGMP_CC PF16808.5 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.03 14.2 2.3 0.068 13.0 0.3 2.5 2 1 1 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DivIC PF04977.15 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.04 13.7 2.0 0.065 13.0 0.6 1.8 1 1 1 2 2 2 0 Septum formation initiator TMPIT PF07851.13 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.061 12.6 0.7 0.066 12.4 0.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein TcdB_N PF12918.7 NODE_78772_length_200_cov_66.939394_g70831_i0reverse_frame_2 - 0.09 13.1 1.8 0.09 13.1 1.8 1.9 1 1 1 2 2 2 0 TcdB toxin N-terminal helical domain zf-met PF12874.7 NODE_78772_length_200_cov_66.939394_g70831_i0forward_frame_3 - 0.4 11.1 5.7 0.84 10.1 5.7 1.5 1 0 0 1 1 1 0 Zinc-finger of C2H2 type DUF3177 PF11375.8 NODE_78771_length_200_cov_68.945455_g70830_i0reverse_frame_3 - 0.054 13.3 0.1 0.056 13.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3177) DUF3953 PF13129.6 NODE_78766_length_200_cov_78.648485_g70825_i0forward_frame_2 - 0.013 15.2 3.3 0.023 14.5 3.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3953) cNMP_binding PF00027.29 NODE_78763_length_200_cov_85.139394_g70822_i0forward_frame_2 - 5.6e-05 23.1 0.0 7.3e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Calici_coat_C PF08435.11 NODE_78759_length_200_cov_89.884848_g70818_i0reverse_frame_3 - 0.19 11.2 0.1 0.23 11.0 0.1 1.1 1 0 0 1 1 1 0 Calicivirus coat protein C-terminal DUF1489 PF07370.11 NODE_78757_length_200_cov_107.096970_g70816_i0reverse_frame_2 - 0.1 12.3 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1489) Chi-conotoxin PF16981.5 NODE_78754_length_200_cov_111.042424_g70813_i0forward_frame_3 - 0.098 12.9 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 chi-Conotoxin or t superfamily Transpos_assoc PF13963.6 NODE_78753_length_200_cov_113.260606_g70812_i0forward_frame_2 - 0.057 13.7 0.0 0.07 13.4 0.0 1.1 1 0 0 1 1 1 0 Transposase-associated domain DUF3404 PF11884.8 NODE_78750_length_200_cov_133.224242_g70809_i0reverse_frame_3 - 0.1 11.8 0.0 0.11 11.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) Glycolytic PF00274.19 NODE_78748_length_200_cov_145.460606_g70807_i0reverse_frame_3 - 0.078 11.7 0.2 0.075 11.7 0.2 1.1 1 0 0 1 1 1 0 Fructose-bisphosphate aldolase class-I TMEM100 PF16311.5 NODE_78744_length_200_cov_218.127273_g70803_i0forward_frame_3 - 0.034 13.7 0.1 0.037 13.6 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 100 MIT_C PF16565.5 NODE_78743_length_200_cov_228.678788_g70802_i0reverse_frame_2 - 0.099 12.6 0.0 0.14 12.1 0.0 1.3 1 1 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT RAWUL PF16207.5 NODE_78742_length_200_cov_236.890909_g70801_i0forward_frame_3 - 0.02 15.5 0.1 0.027 15.1 0.1 1.2 1 0 0 1 1 1 0 RAWUL domain RING finger- and WD40-associated ubiquitin-like LacY_symp PF01306.19 NODE_78740_length_200_cov_296.012121_g70799_i0reverse_frame_3 - 0.029 13.2 1.7 0.028 13.2 1.7 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter Cys_knot PF00007.22 NODE_78740_length_200_cov_296.012121_g70799_i0forward_frame_3 - 0.016 15.5 10.0 0.017 15.4 10.0 1.1 1 0 0 1 1 1 0 Cystine-knot domain STOP PF05217.12 NODE_78740_length_200_cov_296.012121_g70799_i0forward_frame_3 - 3.9 7.8 21.5 0.33 11.3 13.2 2.2 2 0 0 2 2 2 0 STOP protein TAF1D PF15333.6 NODE_78740_length_200_cov_296.012121_g70799_i0forward_frame_2 - 0.016 15.0 0.8 0.016 15.0 0.8 1.1 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D GTP_cyclohydroI PF01227.22 NODE_78739_length_200_cov_541.084848_g70798_i0forward_frame_3 - 0.075 12.5 0.1 0.089 12.2 0.1 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase I FixP_N PF14715.6 NODE_78738_length_200_cov_4111.890909_g70797_i0reverse_frame_3 - 0.51 10.1 4.7 0.66 9.8 4.7 1.1 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP LacY_symp PF01306.19 NODE_78738_length_200_cov_4111.890909_g70797_i0reverse_frame_3 - 0.83 8.4 5.7 0.88 8.3 5.7 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter DUF591 PF04569.14 NODE_78737_length_200_cov_5761.800000_g70796_i0forward_frame_3 - 0.12 12.4 3.4 0.66 10.1 3.4 2.0 1 1 0 1 1 1 0 Protein of unknown function AP4E_app_platf PF14807.6 NODE_78736_length_201_cov_0.849398_g70795_i0reverse_frame_2 - 0.32 11.4 4.4 0.35 11.2 4.4 1.0 1 0 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform DUF3915 PF13054.6 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_3 - 0.012 15.6 4.4 0.013 15.5 4.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_3 - 0.089 11.1 8.2 0.089 11.1 8.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family Phage_Gp23 PF10669.9 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_3 - 0.89 9.9 4.2 0.92 9.9 4.2 1.2 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) Auts2 PF15336.6 NODE_78732_length_201_cov_0.903614_g70791_i0reverse_frame_3 - 9.2 6.3 7.0 11 6.1 7.0 1.1 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein CSRNP_N PF16019.5 NODE_78730_length_201_cov_0.921687_g70789_i0reverse_frame_2 - 1.1 9.2 5.8 1.1 9.1 5.8 1.2 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus DUF2423 PF10338.9 NODE_78729_length_201_cov_0.933735_g70788_i0forward_frame_2 - 0.045 14.0 5.1 0.045 14.0 5.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2423) NPL4 PF05021.15 NODE_78721_length_201_cov_0.957831_g70780_i0forward_frame_2 - 0.11 11.8 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 NPL4 family Sex_peptide PF08138.11 NODE_78718_length_201_cov_0.957831_g70777_i0forward_frame_3 - 0.13 12.4 2.3 0.16 12.2 2.3 1.3 1 1 0 1 1 1 0 Sex peptide (SP) family CDC48_2 PF02933.17 NODE_78715_length_201_cov_0.963855_g70774_i0forward_frame_3 - 0.042 13.6 0.0 0.042 13.6 0.0 1.1 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 EELM2 PF15863.5 NODE_78714_length_201_cov_0.963855_g70773_i0forward_frame_3 - 0.11 12.6 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Extended EGL-27 and MTA1 homology domain Chromo_shadow PF01393.19 NODE_78711_length_201_cov_0.963855_g70770_i0reverse_frame_2 - 0.027 14.5 0.0 0.05 13.7 0.0 1.5 1 0 0 1 1 1 0 Chromo shadow domain SecIII_SopE_N PF05364.14 NODE_78704_length_201_cov_0.963855_g70763_i0forward_frame_2 - 0.027 14.5 0.0 0.033 14.2 0.0 1.1 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus zf-RING_14 PF17978.1 NODE_78703_length_201_cov_0.963855_g70762_i0reverse_frame_2 - 0.014 15.8 1.3 0.015 15.7 1.3 1.0 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain IQ PF00612.27 NODE_78701_length_201_cov_0.963855_g70760_i0forward_frame_3 - 0.89 9.5 4.0 1.4 8.9 4.0 1.3 1 0 0 1 1 1 0 IQ calmodulin-binding motif DUF5383 PF17355.2 NODE_78700_length_201_cov_0.963855_g70759_i0forward_frame_2 - 2.9 8.3 4.9 1.2 9.5 2.5 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5383) SSP160 PF06933.11 NODE_78689_length_201_cov_0.963855_g70748_i0forward_frame_2 - 0.52 8.5 8.4 0.51 8.5 8.4 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 PilA4 PF18682.1 NODE_78686_length_201_cov_0.963855_g70745_i0forward_frame_2 - 0.051 13.9 0.2 0.063 13.6 0.2 1.1 1 0 0 1 1 1 0 Pilin A4 Nrap_D6 PF17407.2 NODE_78682_length_201_cov_0.963855_g70741_i0reverse_frame_2 - 0.035 14.3 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Nrap protein domain 6 Lem_TRP PF08262.11 NODE_78682_length_201_cov_0.963855_g70741_i0forward_frame_3 - 0.1 12.6 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Leucophaea maderae tachykinin-related peptide TP2 PF01254.18 NODE_78681_length_201_cov_0.963855_g70740_i0reverse_frame_2 - 0.035 14.7 4.7 0.037 14.6 4.7 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 TK PF00265.18 NODE_78676_length_201_cov_0.969880_g70735_i0forward_frame_2 - 1.5e-17 64.0 0.0 1.6e-17 64.0 0.0 1.0 1 0 0 1 1 1 1 Thymidine kinase Herpes_ori_bp PF02399.15 NODE_78676_length_201_cov_0.969880_g70735_i0forward_frame_2 - 0.029 12.4 0.0 0.031 12.4 0.0 1.0 1 0 0 1 1 1 0 Origin of replication binding protein AAA_14 PF13173.6 NODE_78676_length_201_cov_0.969880_g70735_i0forward_frame_2 - 0.12 12.4 0.0 0.12 12.4 0.0 1.0 1 0 0 1 1 1 0 AAA domain PRP8_domainIV PF12134.8 NODE_78675_length_201_cov_0.975904_g70734_i0reverse_frame_3 - 0.031 14.0 0.0 0.031 14.0 0.0 1.0 1 0 0 1 1 1 0 PRP8 domain IV core Acetyltransf_1 PF00583.25 NODE_78674_length_201_cov_0.981928_g70733_i0forward_frame_3 - 0.085 13.1 0.0 0.094 13.0 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Tmemb_18A PF09771.9 NODE_78672_length_201_cov_1.012048_g70731_i0reverse_frame_3 - 0.097 13.1 0.1 0.1 13.0 0.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 188 EAV_GP5 PF15981.5 NODE_78671_length_201_cov_1.018072_g70730_i0reverse_frame_3 - 0.041 14.3 1.1 0.047 14.1 1.1 1.2 1 0 0 1 1 1 0 Envelope glycoprotein GP 5 of equine arteritis virus YidD PF01809.18 NODE_78668_length_201_cov_1.036145_g70727_i0forward_frame_3 - 0.0049 16.7 1.1 0.0072 16.2 1.1 1.3 1 0 0 1 1 1 1 Putative membrane protein insertion efficiency factor DUF3326 PF11805.8 NODE_78661_length_201_cov_1.126506_g70720_i0forward_frame_3 - 0.043 12.7 0.0 0.045 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3326) DiS_P_DiS PF06750.13 NODE_78661_length_201_cov_1.126506_g70720_i0forward_frame_3 - 0.14 12.3 0.7 0.19 11.8 0.7 1.2 1 0 0 1 1 1 0 Bacterial Peptidase A24 N-terminal domain WSK PF03832.13 NODE_78658_length_201_cov_1.132530_g70717_i0reverse_frame_3 - 0.047 13.4 0.2 0.073 12.8 0.2 1.3 1 0 0 1 1 1 0 WSK motif Stevor PF17410.2 NODE_78656_length_201_cov_1.138554_g70715_i0reverse_frame_2 - 0.14 11.7 1.6 0.16 11.5 1.6 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame AalphaY_MDB PF04611.12 NODE_78653_length_201_cov_1.150602_g70712_i0reverse_frame_2 - 0.022 14.8 0.1 0.025 14.6 0.1 1.1 1 0 0 1 1 1 0 Mating type protein A alpha Y mating type dependent binding region HTH_ABP1_N PF18107.1 NODE_78647_length_201_cov_1.180723_g70706_i0reverse_frame_2 - 0.25 11.1 2.5 0.35 10.6 2.5 1.2 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain DUF3039 PF11238.8 NODE_78643_length_201_cov_1.198795_g70702_i0reverse_frame_3 - 0.084 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3039) DUF2195 PF09961.9 NODE_78642_length_201_cov_1.204819_g70701_i0forward_frame_3 - 0.019 14.9 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2195) bPH_5 PF10882.8 NODE_78636_length_201_cov_1.222892_g70695_i0forward_frame_2 - 0.052 13.6 0.0 0.063 13.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial PH domain DUF236 PF03057.14 NODE_78634_length_201_cov_1.228916_g70693_i0reverse_frame_2 - 0.26 11.3 1.8 1.8 8.6 0.1 2.1 2 0 0 2 2 2 0 DUF236 repeat Elf1 PF05129.13 NODE_78631_length_201_cov_1.259036_g70690_i0forward_frame_3 - 0.15 12.1 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like Atrophin-1 PF03154.15 NODE_78630_length_201_cov_1.271084_g70689_i0reverse_frame_3 - 2.2 6.5 4.5 2.4 6.4 4.5 1.0 1 0 0 1 1 1 0 Atrophin-1 family zf-C3HC4_5 PF17121.5 NODE_78620_length_201_cov_1.313253_g70679_i0forward_frame_3 - 0.079 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Kazal_3 PF18434.1 NODE_78619_length_201_cov_1.313253_g70678_i0reverse_frame_3 - 0.0061 16.3 0.3 1.3 8.9 0.0 2.1 1 1 1 2 2 2 2 Kazal-type serine protease inhibitor domain HAP2-GCS1 PF10699.9 NODE_78619_length_201_cov_1.313253_g70678_i0forward_frame_3 - 0.037 14.0 0.4 0.061 13.3 0.4 1.5 1 1 0 1 1 1 0 Male gamete fusion factor DUF1233 PF06806.12 NODE_78619_length_201_cov_1.313253_g70678_i0forward_frame_3 - 0.17 11.5 0.5 13 5.5 0.1 2.1 1 1 1 2 2 2 0 Putative excisionase (DUF1233) DUF3439 PF11921.8 NODE_78613_length_201_cov_1.379518_g70672_i0reverse_frame_3 - 0.35 10.8 6.8 0.36 10.8 6.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) SP_C-Propep PF08999.10 NODE_78613_length_201_cov_1.379518_g70672_i0forward_frame_3 - 0.02 14.6 3.2 0.023 14.5 3.2 1.1 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide DUF4083 PF13314.6 NODE_78612_length_201_cov_1.391566_g70671_i0reverse_frame_2 - 7.8 6.5 8.1 18 5.4 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) DUF3660 PF12398.8 NODE_78607_length_201_cov_1.409639_g70666_i0forward_frame_2 - 0.18 11.9 1.1 0.22 11.6 0.1 1.7 2 1 0 2 2 2 0 Receptor serine/threonine kinase Biotin_lipoyl PF00364.22 NODE_78604_length_201_cov_1.427711_g70663_i0forward_frame_2 - 0.13 12.1 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Biotin-requiring enzyme DUF3563 PF12086.8 NODE_78600_length_201_cov_1.433735_g70659_i0reverse_frame_2 - 0.081 12.7 0.2 0.16 11.7 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3563) Phage_int_SAM_1 PF02899.17 NODE_78599_length_201_cov_1.439759_g70658_i0forward_frame_2 - 0.0041 17.4 0.0 0.0047 17.2 0.0 1.0 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Macin PF14865.6 NODE_78598_length_201_cov_1.439759_g70657_i0reverse_frame_3 - 0.032 14.8 0.7 0.038 14.5 0.7 1.2 1 0 0 1 1 1 0 Macin KleE PF17394.2 NODE_78596_length_201_cov_1.439759_g70655_i0reverse_frame_2 - 0.037 14.2 0.2 0.044 14.0 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein Fcf1 PF04900.12 NODE_78596_length_201_cov_1.439759_g70655_i0forward_frame_3 - 8.2e-07 29.4 1.5 9.1e-07 29.2 1.5 1.1 1 0 0 1 1 1 1 Fcf1 CPSase_C PF18302.1 NODE_78594_length_201_cov_1.439759_g70653_i0reverse_frame_3 - 0.22 12.0 1.4 0.31 11.6 0.2 1.9 2 0 0 2 2 2 0 Carbamoyl phosphate synthetase C-terminal domain Dicty_CTDC PF00526.18 NODE_78592_length_201_cov_1.445783_g70651_i0reverse_frame_2 - 0.023 14.6 3.6 0.043 13.7 3.6 1.4 1 0 0 1 1 1 0 Dictyostelium (slime mold) repeat Phage_GP20 PF06810.11 NODE_78591_length_201_cov_1.445783_g70650_i0reverse_frame_3 - 0.008 16.0 0.1 0.0089 15.8 0.1 1.1 1 0 0 1 1 1 1 Phage minor structural protein GP20 Baculo_11_kDa PF06143.11 NODE_78591_length_201_cov_1.445783_g70650_i0forward_frame_3 - 0.37 10.4 5.3 0.44 10.1 5.3 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family NUC202 PF08166.12 NODE_78590_length_201_cov_1.445783_g70649_i0reverse_frame_3 - 0.074 13.1 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 NUC202 domain HTH_Tnp_Tc3_1 PF11427.8 NODE_78590_length_201_cov_1.445783_g70649_i0forward_frame_3 - 0.025 14.4 0.5 0.042 13.7 0.5 1.3 1 0 0 1 1 1 0 Tc3 transposase Pox_A32 PF04665.12 NODE_78589_length_201_cov_1.445783_g70648_i0forward_frame_3 - 0.038 13.5 0.0 0.043 13.3 0.0 1.0 1 0 0 1 1 1 0 Poxvirus A32 protein LapA_dom PF06305.11 NODE_78589_length_201_cov_1.445783_g70648_i0forward_frame_3 - 0.23 11.3 4.9 0.53 10.1 4.8 1.6 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain NEAT PF05031.12 NODE_78584_length_201_cov_1.445783_g70643_i0reverse_frame_2 - 0.022 15.4 0.7 0.024 15.2 0.7 1.0 1 0 0 1 1 1 0 Iron Transport-associated domain Amelogenin PF02948.15 NODE_78581_length_201_cov_1.445783_g70640_i0forward_frame_3 - 0.058 14.0 0.2 0.058 14.0 0.2 1.0 1 0 0 1 1 1 0 Amelogenin ketoacyl-synt PF00109.26 NODE_78581_length_201_cov_1.445783_g70640_i0forward_frame_2 - 4.1e-15 56.0 0.1 4.5e-15 55.9 0.1 1.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain I-EGF_1 PF18372.1 NODE_78578_length_201_cov_1.445783_g70637_i0reverse_frame_3 - 0.21 11.7 1.3 0.21 11.7 1.3 1.8 2 0 0 2 2 2 0 Integrin beta epidermal growth factor like domain 1 DUF3913 PF13052.6 NODE_78578_length_201_cov_1.445783_g70637_i0reverse_frame_2 - 0.11 12.8 0.0 0.15 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3913) AZUL PF16558.5 NODE_78578_length_201_cov_1.445783_g70637_i0forward_frame_2 - 0.09 13.0 0.2 0.14 12.4 0.1 1.4 2 0 0 2 2 2 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A DAP10 PF07213.11 NODE_78574_length_201_cov_1.463855_g70633_i0forward_frame_3 - 1.1 9.3 8.2 0.091 12.7 1.0 2.0 1 1 1 2 2 2 0 DAP10 membrane protein Lamprin PF06403.11 NODE_78573_length_201_cov_1.481928_g70632_i0forward_frame_3 - 0.11 12.5 1.7 0.13 12.2 1.7 1.2 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_78570_length_201_cov_1.506024_g70629_i0forward_frame_3 - 0.015 15.2 2.7 0.016 15.2 2.7 1.1 1 0 0 1 1 1 0 Lamprin zf-C2HCIx2C PF10782.9 NODE_78567_length_201_cov_1.512048_g70626_i0forward_frame_3 - 0.085 12.8 0.6 0.12 12.3 0.6 1.2 1 0 0 1 1 1 0 Zinc-finger PRA1 PF03208.19 NODE_78564_length_201_cov_1.530120_g70623_i0forward_frame_3 - 0.013 15.1 2.3 0.014 15.0 2.3 1.0 1 0 0 1 1 1 0 PRA1 family protein HTH_Tnp_Tc3_1 PF11427.8 NODE_78561_length_201_cov_1.536145_g70620_i0reverse_frame_2 - 0.13 12.1 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Tc3 transposase DUF4668 PF15701.5 NODE_78553_length_201_cov_1.578313_g70612_i0reverse_frame_2 - 0.035 13.9 0.0 0.035 13.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) GnsAB_toxin PF08178.11 NODE_78551_length_201_cov_1.584337_g70610_i0forward_frame_2 - 8.6e-19 67.2 0.2 1.1e-18 66.9 0.2 1.1 1 0 0 1 1 1 1 GnsA/GnsB toxin of bacterial toxin-antitoxin system SCRL PF06876.12 NODE_78547_length_201_cov_1.614458_g70606_i0reverse_frame_2 - 0.011 15.9 1.4 0.015 15.5 1.4 1.2 1 0 0 1 1 1 0 Plant self-incompatibility response (SCRL) protein bPH_5 PF10882.8 NODE_78545_length_201_cov_1.626506_g70604_i0reverse_frame_3 - 0.12 12.4 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial PH domain zf-C3HC4_3 PF13920.6 NODE_78543_length_201_cov_1.638554_g70602_i0reverse_frame_2 - 0.0074 16.1 6.4 0.011 15.6 6.4 1.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_78543_length_201_cov_1.638554_g70602_i0reverse_frame_2 - 0.023 14.5 2.6 0.03 14.2 2.6 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 LEP503 PF15221.6 NODE_78541_length_201_cov_1.650602_g70600_i0forward_frame_3 - 0.13 12.6 0.1 0.16 12.3 0.1 1.1 1 0 0 1 1 1 0 Lens epithelial cell protein LEP503 Fusion_F0 PF13044.6 NODE_78539_length_201_cov_1.650602_g70598_i0forward_frame_3 - 0.052 12.2 0.9 0.047 12.3 0.9 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0, Isavirus DUF3704 PF12488.8 NODE_78538_length_201_cov_1.656627_g70597_i0forward_frame_2 - 0.25 11.0 0.6 0.25 11.0 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3704) 2-ph_phosp PF04029.14 NODE_78535_length_201_cov_1.668675_g70594_i0reverse_frame_3 - 0.0021 17.3 0.3 0.0021 17.3 0.3 1.0 1 0 0 1 1 1 1 2-phosphosulpholactate phosphatase PDEase_I_N PF08499.12 NODE_78532_length_201_cov_1.680723_g70591_i0reverse_frame_2 - 0.0064 16.3 0.0 0.008 16.0 0.0 1.2 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase N-terminal Plasmodium_Vir PF05795.11 NODE_78532_length_201_cov_1.680723_g70591_i0reverse_frame_2 - 0.093 12.1 0.5 0.1 12.0 0.5 1.0 1 0 0 1 1 1 0 Plasmodium vivax Vir protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks413.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks413.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks413.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks413.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:11 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Hap4_Hap_bind PF10297.9 NODE_78530_length_201_cov_1.686747_g70589_i0reverse_frame_3 - 0.0088 16.1 0.1 0.018 15.2 0.1 1.5 1 0 0 1 1 1 1 Minimal binding motif of Hap4 for binding to Hap2/3/5 PET PF06297.14 NODE_78529_length_201_cov_1.716867_g70588_i0forward_frame_2 - 0.047 14.0 0.0 0.05 13.9 0.0 1.1 1 0 0 1 1 1 0 PET Domain Nodulin_late PF07127.11 NODE_78527_length_201_cov_1.734940_g70586_i0forward_frame_2 - 0.059 13.7 0.1 0.059 13.7 0.1 1.4 2 0 0 2 2 2 0 Late nodulin protein polyprenyl_synt PF00348.17 NODE_78522_length_201_cov_1.813253_g70581_i0reverse_frame_2 - 6.4e-23 81.1 0.2 6.5e-23 81.1 0.2 1.0 1 0 0 1 1 1 1 Polyprenyl synthetase DUF1385 PF07136.11 NODE_78519_length_201_cov_1.837349_g70578_i0reverse_frame_2 - 0.88 8.8 5.1 0.97 8.7 5.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) V-set_CD47 PF08204.11 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_2 - 0.038 14.0 0.3 0.038 14.0 0.3 1.1 1 0 0 1 1 1 0 CD47 immunoglobulin-like domain FBPase_2 PF06874.11 NODE_78517_length_201_cov_1.855422_g70576_i0reverse_frame_2 - 0.25 9.6 4.2 0.28 9.4 4.2 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase MatE PF01554.18 NODE_78515_length_201_cov_1.861446_g70574_i0reverse_frame_3 - 0.0059 16.3 0.9 0.0061 16.2 0.9 1.0 1 0 0 1 1 1 1 MatE Mst1_SARAH PF11629.8 NODE_78514_length_201_cov_1.867470_g70573_i0forward_frame_3 - 0.014 15.4 0.1 0.022 14.8 0.1 1.3 1 0 0 1 1 1 0 C terminal SARAH domain of Mst1 PsbL PF02419.17 NODE_78511_length_201_cov_1.879518_g70570_i0forward_frame_3 - 0.22 11.5 0.7 0.33 11.0 0.7 1.2 1 0 0 1 1 1 0 PsbL protein DUF5529 PF17669.1 NODE_78511_length_201_cov_1.879518_g70570_i0forward_frame_2 - 0.039 14.0 1.1 0.041 13.9 1.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5529) Adeno_E3_14_5 PF04834.12 NODE_78511_length_201_cov_1.879518_g70570_i0forward_frame_2 - 0.053 14.1 0.0 0.06 13.9 0.0 1.1 1 0 0 1 1 1 0 Early E3 14.5 kDa protein RNase_PH PF01138.21 NODE_78510_length_201_cov_1.885542_g70569_i0forward_frame_2 - 0.01 16.4 0.0 0.01 16.3 0.0 1.1 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 WSK PF03832.13 NODE_78510_length_201_cov_1.885542_g70569_i0forward_frame_2 - 0.11 12.2 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 WSK motif RSV_NS2 PF03113.14 NODE_78508_length_201_cov_1.903614_g70567_i0reverse_frame_2 - 0.043 13.8 0.5 0.048 13.7 0.5 1.0 1 0 0 1 1 1 0 Respiratory synctial virus non-structural protein NS2 Sulfatase PF00884.23 NODE_78502_length_201_cov_1.927711_g70561_i0forward_frame_3 - 2.6e-21 76.3 0.1 2.8e-21 76.2 0.1 1.0 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 NODE_78502_length_201_cov_1.927711_g70561_i0forward_frame_3 - 0.0023 17.6 0.0 0.0023 17.6 0.0 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Rieske_2 PF13806.6 NODE_78501_length_201_cov_1.927711_g70560_i0forward_frame_2 - 0.1 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain Mvb12 PF09452.10 NODE_78496_length_201_cov_1.993976_g70555_i0reverse_frame_2 - 0.14 12.6 0.7 0.21 12.0 0.7 1.3 1 0 0 1 1 1 0 ESCRT-I subunit Mvb12 TBSV_P22 PF03558.13 NODE_78493_length_201_cov_2.018072_g70552_i0reverse_frame_2 - 0.13 11.7 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 TBSV core protein P21/P22 N_BRCA1_IG PF16158.5 NODE_78483_length_201_cov_2.072289_g70542_i0reverse_frame_2 - 0.0004 21.1 0.0 0.00045 20.9 0.0 1.2 1 0 0 1 1 1 1 Ig-like domain from next to BRCA1 gene IGFL PF14653.6 NODE_78481_length_201_cov_2.090361_g70540_i0reverse_frame_2 - 0.0052 16.7 3.4 0.0068 16.4 3.4 1.2 1 0 0 1 1 1 1 Insulin growth factor-like family zf-LITAF-like PF10601.9 NODE_78478_length_201_cov_2.150602_g70537_i0forward_frame_2 - 9.3e-05 22.6 0.3 0.00013 22.1 0.3 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Cys_rich_KTR PF14205.6 NODE_78478_length_201_cov_2.150602_g70537_i0forward_frame_2 - 0.016 15.0 0.3 0.022 14.6 0.3 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR DUF3797 PF12677.7 NODE_78478_length_201_cov_2.150602_g70537_i0forward_frame_2 - 0.044 13.7 0.2 0.057 13.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) ribosomal_L24 PF17136.4 NODE_78478_length_201_cov_2.150602_g70537_i0forward_frame_2 - 0.19 12.2 4.3 0.38 11.2 4.3 1.7 1 1 0 1 1 1 0 Ribosomal proteins 50S L24/mitochondrial 39S L24 CaM_bdg_C0 PF10562.9 NODE_78476_length_201_cov_2.162651_g70535_i0reverse_frame_3 - 0.036 14.1 3.0 0.036 14.1 3.0 1.7 2 0 0 2 2 2 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit Pkinase PF00069.25 NODE_78475_length_201_cov_2.162651_g70534_i0reverse_frame_3 - 9.9e-05 21.8 0.1 0.00012 21.6 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF3975 PF13126.6 NODE_78470_length_201_cov_2.228916_g70529_i0reverse_frame_3 - 0.084 13.3 2.7 0.096 13.1 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) DUF3403 PF11883.8 NODE_78468_length_201_cov_2.246988_g70527_i0reverse_frame_3 - 0.041 14.0 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3403) MIF4G PF02854.19 NODE_78463_length_201_cov_2.277108_g70522_i0reverse_frame_3 - 0.0097 15.6 0.5 0.01 15.5 0.5 1.0 1 0 0 1 1 1 1 MIF4G domain Zmiz1_N PF18028.1 NODE_78463_length_201_cov_2.277108_g70522_i0forward_frame_3 - 0.02 15.2 0.5 0.027 14.8 0.5 1.2 1 0 0 1 1 1 0 Zmiz1 N-terminal tetratricopeptide repeat domain FAM75 PF14650.6 NODE_78462_length_201_cov_2.277108_g70521_i0reverse_frame_3 - 1.6 8.2 11.6 1.7 8.1 11.6 1.1 1 0 0 1 1 1 0 FAM75 family AraC_binding_2 PF14525.6 NODE_78451_length_201_cov_2.409639_g70510_i0forward_frame_2 - 0.017 14.8 0.5 0.018 14.7 0.5 1.1 1 0 0 1 1 1 0 AraC-binding-like domain MHC_I_2 PF14586.6 NODE_78450_length_201_cov_2.439759_g70509_i0reverse_frame_2 - 0.14 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Class I Histocompatibility antigen, NKG2D ligand, domains 1 and 2 Squash PF00299.18 NODE_78449_length_201_cov_2.463855_g70508_i0reverse_frame_2 - 0.11 12.5 1.3 0.11 12.5 1.3 1.8 2 0 0 2 2 2 0 Squash family serine protease inhibitor Pkinase PF00069.25 NODE_78447_length_201_cov_2.560241_g70506_i0reverse_frame_2 - 0.00016 21.1 0.0 0.00019 20.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain PTPS_related PF10131.9 NODE_78446_length_201_cov_2.578313_g70505_i0forward_frame_3 - 0.068 11.5 0.4 0.072 11.4 0.4 1.0 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein FPV060 PF17614.2 NODE_78445_length_201_cov_2.590361_g70504_i0forward_frame_3 - 0.16 11.3 0.9 0.16 11.3 0.9 1.1 1 0 0 1 1 1 0 Viral CC-type chemokine DUF2701 PF10857.8 NODE_78441_length_201_cov_2.716867_g70500_i0reverse_frame_2 - 0.13 12.3 0.3 0.15 12.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) AbiGi PF10899.8 NODE_78441_length_201_cov_2.716867_g70500_i0reverse_frame_2 - 0.14 12.0 0.1 0.16 11.8 0.1 1.1 1 0 0 1 1 1 0 Putative abortive phage resistance protein AbiGi, antitoxin FeoB_associated PF12669.7 NODE_78435_length_201_cov_2.795181_g70494_i0forward_frame_2 - 0.18 12.2 5.7 0.27 11.7 4.5 1.8 1 1 1 2 2 2 0 FeoB-associated Cys-rich membrane protein B3_4 PF03483.17 NODE_78433_length_201_cov_2.825301_g70492_i0reverse_frame_3 - 0.055 13.1 0.1 0.06 13.0 0.1 1.1 1 0 0 1 1 1 0 B3/4 domain PEARLI-4 PF05278.12 NODE_78429_length_201_cov_2.987952_g70488_i0reverse_frame_2 - 0.039 13.6 0.1 0.044 13.4 0.1 1.0 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) GTP_cyclohydroI PF01227.22 NODE_78429_length_201_cov_2.987952_g70488_i0forward_frame_2 - 0.05 13.0 2.7 0.068 12.6 2.7 1.1 1 0 0 1 1 1 0 GTP cyclohydrolase I Inhibitor_Mig-6 PF11555.8 NODE_78428_length_201_cov_3.084337_g70487_i0reverse_frame_3 - 0.042 14.0 4.3 0.051 13.7 4.3 1.2 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 HTH_6 PF01418.17 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 6.2e-18 64.6 0.8 7.2e-18 64.3 0.8 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family HTH_50 PF18024.1 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 3.5e-05 23.3 1.4 5.8e-05 22.6 0.2 1.9 2 1 0 2 2 2 1 Helix-turn-helix domain Rrf2 PF02082.20 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.0079 16.5 0.1 0.0089 16.4 0.1 1.1 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.01 16.0 0.1 0.015 15.5 0.1 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_10 PF04967.12 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.02 14.7 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain MarR PF01047.22 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.021 14.8 0.0 0.032 14.2 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.03 14.3 0.0 0.036 14.0 0.0 1.2 1 0 0 1 1 1 0 HTH domain MarR_2 PF12802.7 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.032 14.1 0.1 0.044 13.7 0.1 1.2 1 0 0 1 1 1 0 MarR family NUMOD1 PF07453.13 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.049 13.9 0.0 0.11 12.8 0.0 1.6 1 0 0 1 1 1 0 NUMOD1 domain HTH_Tnp_1_2 PF13022.6 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.078 13.1 0.0 0.091 12.9 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase TnsD PF15978.5 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.096 11.7 0.1 0.096 11.7 0.1 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D Put_DNA-bind_N PF06971.13 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.096 12.7 0.8 0.16 12.0 0.8 1.4 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus HTH_28 PF13518.6 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.13 12.4 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain YdaS_antitoxin PF15943.5 NODE_78427_length_201_cov_3.168675_g70486_i0reverse_frame_3 - 0.14 12.1 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT UPF0016 PF01169.19 NODE_78426_length_201_cov_3.204819_g70485_i0reverse_frame_3 - 0.069 13.5 0.0 0.069 13.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein family UPF0016 RepA1_leader PF08048.12 NODE_78424_length_201_cov_3.373494_g70483_i0reverse_frame_3 - 0.039 14.2 1.3 0.039 14.2 1.3 2.1 2 0 0 2 2 2 0 Tap RepA1 leader peptide Caveolin PF01146.17 NODE_78423_length_201_cov_3.427711_g70482_i0reverse_frame_3 - 0.054 13.4 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 Caveolin DUF2477 PF10631.9 NODE_78422_length_201_cov_3.433735_g70481_i0reverse_frame_2 - 7.7 7.2 12.8 11 6.7 12.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2477) UL40 PF10682.9 NODE_78422_length_201_cov_3.433735_g70481_i0forward_frame_3 - 0.093 12.4 0.1 0.093 12.4 0.1 1.0 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 COX2_TM PF02790.15 NODE_78421_length_201_cov_3.548193_g70480_i0reverse_frame_3 - 0.067 13.3 0.1 0.08 13.1 0.1 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain Cytomega_TRL10 PF06084.11 NODE_78419_length_201_cov_3.716867_g70478_i0reverse_frame_3 - 0.069 13.2 0.1 0.071 13.1 0.1 1.0 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein MyTH4 PF00784.17 NODE_78416_length_201_cov_3.879518_g70475_i0reverse_frame_2 - 0.1 13.1 3.6 0.12 12.9 3.6 1.1 1 0 0 1 1 1 0 MyTH4 domain CcmD PF04995.14 NODE_78414_length_201_cov_4.500000_g70473_i0forward_frame_3 - 0.023 14.7 0.5 0.033 14.3 0.5 1.2 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Ge1_WD40 PF16529.5 NODE_78414_length_201_cov_4.500000_g70473_i0forward_frame_2 - 0.00013 21.0 0.0 0.00016 20.7 0.0 1.0 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40 PF00400.32 NODE_78414_length_201_cov_4.500000_g70473_i0forward_frame_2 - 0.00034 21.3 0.0 0.0006 20.6 0.0 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat FlhD PF05247.13 NODE_78400_length_201_cov_26.867470_g70459_i0forward_frame_2 - 0.07 13.4 0.0 0.085 13.1 0.0 1.1 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) Cadherin_tail PF15974.5 NODE_78396_length_201_cov_32.349398_g70455_i0reverse_frame_2 - 0.0061 16.9 0.8 0.007 16.7 0.8 1.2 1 0 0 1 1 1 1 Cadherin C-terminal cytoplasmic tail, catenin-binding region NdhL PF10716.9 NODE_78396_length_201_cov_32.349398_g70455_i0forward_frame_3 - 10 6.2 7.8 15 5.6 7.8 1.3 1 0 0 1 1 1 0 NADH dehydrogenase transmembrane subunit PLATZ PF04640.14 NODE_78394_length_201_cov_33.843373_g70453_i0forward_frame_2 - 0.16 12.6 4.8 0.23 12.1 4.8 1.3 1 0 0 1 1 1 0 PLATZ transcription factor MHCassoc_trimer PF08831.10 NODE_78392_length_201_cov_35.536145_g70451_i0reverse_frame_3 - 0.035 14.1 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 Class II MHC-associated invariant chain trimerisation domain TerY_C PF15616.6 NODE_78389_length_201_cov_39.734940_g70448_i0reverse_frame_2 - 0.11 12.6 8.8 0.12 12.5 8.8 1.1 1 0 0 1 1 1 0 TerY-C metal binding domain Hydrophobin_2 PF06766.11 NODE_78389_length_201_cov_39.734940_g70448_i0forward_frame_3 - 0.012 15.5 2.7 0.018 15.0 2.7 1.3 1 0 0 1 1 1 0 Fungal hydrophobin TMEMspv1-c74-12 PF11044.8 NODE_78380_length_201_cov_47.132530_g70439_i0reverse_frame_2 - 0.99 9.4 7.4 1.6 8.8 7.4 1.3 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Transformer PF06495.11 NODE_78379_length_201_cov_48.385542_g70438_i0forward_frame_2 - 0.23 11.6 8.5 0.26 11.4 8.5 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein GRP PF07172.11 NODE_78376_length_201_cov_50.138554_g70435_i0forward_frame_2 - 0.76 10.5 13.9 0.9 10.3 13.9 1.1 1 0 0 1 1 1 0 Glycine rich protein family LEDGF PF11467.8 NODE_78364_length_201_cov_60.945783_g70423_i0forward_frame_3 - 0.14 11.8 0.5 2 8.0 0.0 2.0 1 1 1 2 2 2 0 Lens epithelium-derived growth factor (LEDGF) Thionin PF00321.17 NODE_78363_length_201_cov_62.006024_g70422_i0reverse_frame_2 - 0.034 14.6 2.0 0.05 14.1 2.0 1.2 1 0 0 1 1 1 0 Plant thionin DUF5444 PF17519.2 NODE_78349_length_201_cov_86.897590_g70408_i0reverse_frame_2 - 0.053 13.5 0.0 0.37 10.8 0.0 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5444) Calpain_III PF01067.22 NODE_78345_length_201_cov_108.150602_g70404_i0forward_frame_2 - 0.013 15.8 0.2 0.014 15.7 0.2 1.0 1 0 0 1 1 1 0 Calpain large subunit, domain III HWE_HK PF07536.14 NODE_78344_length_201_cov_109.554217_g70403_i0reverse_frame_3 - 0.066 13.9 0.0 0.079 13.7 0.0 1.1 1 0 0 1 1 1 0 HWE histidine kinase ATP-synt_F PF01990.17 NODE_78343_length_201_cov_110.993976_g70402_i0reverse_frame_3 - 0.22 11.9 0.0 0.26 11.6 0.0 1.2 1 0 0 1 1 1 0 ATP synthase (F/14-kDa) subunit PRT_C PF08372.10 NODE_78342_length_201_cov_114.349398_g70401_i0forward_frame_3 - 0.041 13.6 2.2 0.045 13.5 2.2 1.0 1 0 0 1 1 1 0 Plant phosphoribosyltransferase C-terminal dsRBD2 PF17842.1 NODE_78341_length_201_cov_114.572289_g70400_i0reverse_frame_3 - 0.083 13.1 0.1 0.095 12.9 0.1 1.0 1 0 0 1 1 1 0 Double-stranded RNA binding domain 2 RMI2 PF16100.5 NODE_78339_length_201_cov_139.765060_g70398_i0reverse_frame_3 - 0.043 13.6 0.0 0.05 13.4 0.0 1.1 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 DUF5472 PF17566.2 NODE_78336_length_201_cov_159.162651_g70395_i0reverse_frame_3 - 0.12 12.3 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) Tmemb_170 PF10190.9 NODE_78332_length_201_cov_179.710843_g70391_i0reverse_frame_3 - 0.014 15.8 0.2 0.019 15.3 0.1 1.3 1 1 0 1 1 1 0 Putative transmembrane protein 170 Inhibitor_Mig-6 PF11555.8 NODE_78331_length_201_cov_180.403614_g70390_i0reverse_frame_3 - 0.011 15.8 0.0 0.015 15.4 0.0 1.3 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 CTXphi_pIII-N1 PF16710.5 NODE_78331_length_201_cov_180.403614_g70390_i0forward_frame_3 - 0.1 12.7 0.1 0.13 12.4 0.1 1.0 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII Fer4_15 PF13459.6 NODE_78328_length_201_cov_219.626506_g70387_i0reverse_frame_2 - 0.0045 17.7 0.1 0.0055 17.4 0.1 1.4 1 1 0 1 1 1 1 4Fe-4S single cluster domain Ferlin_C PF16165.5 NODE_78325_length_201_cov_258.981928_g70384_i0forward_frame_3 - 0.096 12.6 2.6 0.11 12.4 2.6 1.1 1 0 0 1 1 1 0 Ferlin C-terminus zf-C3H1 PF10650.9 NODE_78321_length_201_cov_662.373494_g70380_i0reverse_frame_3 - 0.74 9.6 2.9 1.2 8.9 0.7 2.2 2 0 0 2 2 2 0 Putative zinc-finger domain zf-RING_4 PF14570.6 NODE_78320_length_201_cov_1288.939759_g70379_i0reverse_frame_2 - 0.13 12.0 0.4 0.13 12.0 0.4 2.2 2 1 1 3 3 3 0 RING/Ubox like zinc-binding domain Arm_vescicular PF18770.1 ORF99322 - 0.045 13.7 0.0 0.059 13.3 0.0 1.3 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor NRIP1_repr_3 PF15689.5 ORF99322 - 0.085 13.2 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 3 AAA_lid_8 PF17868.1 ORF99315 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain Toxin_14 PF07829.11 ORF9899 - 0.049 13.6 3.0 0.11 12.4 3.0 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein FANCAA PF15146.6 ORF98201 - 0.022 13.8 0.6 0.025 13.7 0.6 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated MCM_bind PF09739.9 ORF98201 - 0.046 12.2 0.0 0.046 12.2 0.0 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor DUF677 PF05055.12 ORF97885 - 5.1 5.9 10.0 4.7 6.0 10.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF677) Pox_L3_FP4 PF03339.14 ORF97687 - 0.0064 15.5 0.0 0.0071 15.4 0.0 1.0 1 0 0 1 1 1 1 Poxvirus L3/FP4 protein DUF713 PF05218.14 ORF96024 - 0.066 12.9 0.2 0.066 12.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF713) UPF0154 PF03672.13 ORF95344 - 0.013 15.5 1.6 0.026 14.6 1.6 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) Trep_Strep PF09605.10 ORF95344 - 0.18 11.8 1.9 0.22 11.5 1.9 1.1 1 0 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) zf-H3C2 PF16721.5 ORF95284 - 0.097 13.0 0.4 0.13 12.6 0.3 1.3 1 1 0 1 1 1 0 Zinc-finger like, probable DNA-binding FrpC PF06901.12 ORF9419 - 0.15 11.6 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 RTX iron-regulated protein FrpC AAA_lid_8 PF17868.1 ORF94158 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain DUF3043 PF11241.8 ORF93912 - 8.1 6.4 6.2 8.7 6.3 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DsbB PF02600.16 ORF93831 - 0.027 14.9 1.4 0.03 14.8 1.4 1.1 1 0 0 1 1 1 0 Disulfide bond formation protein DsbB MscS_TM PF12794.7 ORF93831 - 0.032 13.1 0.2 0.032 13.1 0.2 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 PTPLA PF04387.14 ORF93770 - 0.0024 17.6 0.2 0.0026 17.5 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine phosphatase-like protein, PTPLA Pox_RNA_pol_35 PF03396.15 ORF93716 - 0.026 13.8 0.6 0.029 13.6 0.6 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 35 kD subunit DUF4052 PF13261.6 ORF93262 - 0.073 12.9 0.0 0.073 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4052) Oleosin PF01277.17 ORF91888 - 0.052 13.3 5.1 0.056 13.2 5.1 1.1 1 0 0 1 1 1 0 Oleosin Ac76 PF05814.11 ORF9188 - 0.19 11.8 1.0 0.25 11.4 1.0 1.2 1 0 0 1 1 1 0 Orf76 (Ac76) bZIP_2 PF07716.15 ORF91615 - 2.1e-05 24.5 1.1 2.5e-05 24.3 1.1 1.2 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF91615 - 0.0004 20.4 0.4 0.00044 20.3 0.4 1.2 1 0 0 1 1 1 1 bZIP transcription factor ABC_tran_CTD PF16326.5 ORF91615 - 0.0017 18.5 0.6 0.0018 18.4 0.6 1.2 1 0 0 1 1 1 1 ABC transporter C-terminal domain Head_binding PF09008.10 ORF91615 - 0.013 15.8 0.1 0.014 15.7 0.1 1.0 1 0 0 1 1 1 0 Head binding CLZ PF16526.5 ORF91615 - 0.014 15.8 0.4 0.017 15.5 0.4 1.1 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels H-kinase_dim PF02895.14 ORF91615 - 0.019 15.3 0.1 0.43 11.0 0.1 2.0 2 0 0 2 2 2 0 Signal transducing histidine kinase, homodimeric domain Casein PF00363.18 ORF91615 - 0.021 15.2 0.4 0.024 15.0 0.4 1.1 1 0 0 1 1 1 0 Casein DUF4354 PF14263.6 ORF91615 - 0.033 14.0 0.1 0.037 13.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4354) FlxA PF14282.6 ORF91615 - 0.034 14.1 0.4 0.039 13.9 0.4 1.2 1 0 0 1 1 1 0 FlxA-like protein Fib_alpha PF08702.10 ORF91615 - 0.065 13.4 0.9 0.07 13.3 0.9 1.0 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF2553 PF10830.8 ORF91615 - 0.071 13.9 0.8 0.12 13.2 0.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2553) Clostridium_P47 PF06597.11 ORF91603 - 7.3 5.2 8.1 8.7 4.9 8.1 1.0 1 0 0 1 1 1 0 Clostridium P-47 protein RINGv PF12906.7 ORF91481 - 0.037 14.2 0.8 0.037 14.2 0.8 1.6 2 0 0 2 2 2 0 RING-variant domain FANCAA PF15146.6 ORF90854 - 0.022 13.8 0.6 0.025 13.7 0.6 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated MCM_bind PF09739.9 ORF90854 - 0.046 12.2 0.0 0.046 12.2 0.0 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor PTPLA PF04387.14 ORF90762 - 0.0024 17.6 0.2 0.0026 17.5 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine phosphatase-like protein, PTPLA AAA_lid_8 PF17868.1 ORF89702 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain AAA_lid_8 PF17868.1 ORF89587 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain DUF659 PF04937.15 ORF88933 - 0.0032 17.3 0.2 0.0036 17.2 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF 659) DUF3927 PF13064.6 ORF88730 - 0.056 13.4 0.1 0.092 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) DUF4658 PF15555.6 ORF88520 - 0.0019 18.3 0.2 0.002 18.2 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) LHH PF14411.6 ORF88113 - 0.12 12.6 0.2 0.12 12.6 0.2 1.5 2 0 0 2 2 2 0 A nuclease of the HNH/ENDO VII superfamily with conserved LHH Vpu PF00558.19 ORF87329 - 0.079 12.7 0.4 0.092 12.5 0.4 1.1 1 0 0 1 1 1 0 Vpu protein V1R PF03402.14 ORF87003 - 0.022 14.4 0.1 0.022 14.4 0.1 1.1 1 0 0 1 1 1 0 Vomeronasal organ pheromone receptor family, V1R DUF4658 PF15555.6 ORF86873 - 0.0019 18.3 0.2 0.002 18.2 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4658) Gln-synt_C PF00120.24 ORF86427 - 0.051 12.6 0.1 0.056 12.4 0.1 1.0 1 0 0 1 1 1 0 Glutamine synthetase, catalytic domain SieB PF14163.6 ORF85696 - 0.55 9.7 3.6 0.46 10.0 2.8 1.4 1 1 0 1 1 1 0 Super-infection exclusion protein B DUF2701 PF10857.8 ORF84833 - 0.1 12.7 2.5 0.13 12.4 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) DUF1145 PF06611.12 ORF84740 - 1.9 8.5 10.5 2 8.4 1.3 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1145) Toxin_14 PF07829.11 ORF84510 - 0.049 13.6 3.0 0.11 12.4 3.0 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein AAA_lid_8 PF17868.1 ORF83777 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain PRIMA1 PF16101.5 ORF83733 - 0.097 12.7 2.4 0.11 12.5 2.4 1.0 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 zf-dskA_traR PF01258.17 ORF82637 - 9.7e-09 35.0 9.7 1.2e-08 34.7 9.7 1.1 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger DUF2256 PF10013.9 ORF82637 - 0.022 14.9 6.2 1.1 9.4 2.1 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) C1_1 PF00130.22 ORF82637 - 0.029 14.3 4.4 0.029 14.3 4.4 1.9 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2116 PF09889.9 ORF82637 - 3.2 7.8 8.5 16 5.6 8.5 1.9 1 1 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Ndc1_Nup PF09531.10 ORF82374 - 2.1 7.0 6.1 2.2 6.9 6.1 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup MbtH PF03621.13 ORF81724 - 0.22 11.0 2.0 0.55 9.7 2.0 1.7 1 1 0 1 1 1 0 MbtH-like protein FabA PF07977.13 ORF8111 - 0.0014 18.3 0.1 0.0015 18.1 0.1 1.1 1 0 0 1 1 1 1 FabA-like domain KKLCAg1 PF15204.6 ORF8111 - 0.015 15.4 0.1 0.018 15.1 0.1 1.2 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 PTPLA PF04387.14 ORF80956 - 0.0024 17.6 0.2 0.0026 17.5 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine phosphatase-like protein, PTPLA Zn_Tnp_IS1 PF03811.13 ORF80928 - 0.21 11.4 0.0 0.31 10.8 0.0 1.2 1 0 0 1 1 1 0 InsA N-terminal domain MgrB PF13998.6 ORF8050 - 0.18 11.7 0.1 0.24 11.3 0.1 1.2 1 0 0 1 1 1 0 MgrB protein P53_C PF11619.8 ORF80200 - 0.045 13.8 0.1 0.06 13.4 0.1 1.2 1 0 0 1 1 1 0 Transcription factor P53 - C terminal domain Tetradecapep PF08187.11 ORF79865 - 0.074 13.1 0.0 0.074 13.1 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family H_PPase PF03030.16 ORF79844 - 0.029 13.0 1.0 0.033 12.8 1.0 1.0 1 0 0 1 1 1 0 Inorganic H+ pyrophosphatase DUF1344 PF07076.11 ORF79728 - 0.14 12.1 0.1 0.3 11.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1344) Defensin_1 PF00323.19 ORF79698 - 0.048 14.2 7.0 0.19 12.3 7.0 1.9 1 1 0 1 1 1 0 Mammalian defensin DUF2953 PF11167.8 ORF79448 - 0.14 12.2 0.8 0.58 10.3 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2953) Pox_RNA_pol_35 PF03396.15 ORF79283 - 0.026 13.8 0.6 0.029 13.6 0.6 1.0 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 35 kD subunit Jiraiya PF15038.6 ORF79012 - 0.26 10.7 5.9 0.98 8.8 2.8 2.0 1 1 1 2 2 2 0 Jiraiya MbtH PF03621.13 ORF78139 - 0.22 11.0 2.0 0.55 9.7 2.0 1.7 1 1 0 1 1 1 0 MbtH-like protein Paramyx_P_V_C PF03210.13 ORF77970 - 0.29 10.9 4.6 0.35 10.6 4.6 1.1 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal Sigma_reg_N PF13800.6 ORF77259 - 0.57 10.5 5.1 0.6 10.4 4.4 1.4 1 1 0 1 1 1 0 Sigma factor regulator N-terminal Gemini_mov PF01708.16 ORF77259 - 1.9 8.3 4.3 3.3 7.5 4.3 1.5 1 1 0 1 1 1 0 Geminivirus putative movement protein FANCAA PF15146.6 ORF7676 - 0.022 13.8 0.6 0.025 13.7 0.6 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated MCM_bind PF09739.9 ORF7676 - 0.046 12.2 0.0 0.046 12.2 0.0 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Pro_sub2 PF18513.1 ORF7620 - 0.035 14.3 0.7 0.068 13.4 0.4 1.6 1 1 1 2 2 2 0 Prodomain subtilisin 2 SYS1 PF09801.9 ORF76147 - 0.0012 19.0 1.3 0.0013 18.9 1.3 1.1 1 0 0 1 1 1 1 Integral membrane protein S linking to the trans Golgi network DUF5385 PF17359.2 ORF76147 - 1.7 8.2 2.9 2.2 7.8 2.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Orexin PF02072.15 ORF76080 - 0.11 12.5 0.8 0.11 12.5 0.8 1.0 1 0 0 1 1 1 0 Prepro-orexin NAD_binding_11 PF14833.6 ORF75960 - 0.0036 17.5 0.1 0.0037 17.5 0.1 1.0 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Imm57 PF15596.6 ORF75960 - 0.0067 16.7 0.0 0.0076 16.6 0.0 1.1 1 0 0 1 1 1 1 Immunity protein 57 DUF4674 PF15719.5 ORF75228 - 0.023 14.7 2.2 0.031 14.3 2.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4674) UCR_TM PF02921.14 ORF75228 - 0.073 13.6 0.1 0.097 13.2 0.1 1.2 1 0 0 1 1 1 0 Ubiquinol cytochrome reductase transmembrane region Fructosamin_kin PF03881.14 ORF7376 - 2.8e-15 56.3 0.0 3e-15 56.2 0.0 1.0 1 0 0 1 1 1 1 Fructosamine kinase zinc_ribbon_2 PF13240.6 ORF73662 - 0.062 13.0 0.4 0.062 13.0 0.4 2.2 3 1 0 3 3 3 0 zinc-ribbon domain DUF104 PF01954.16 ORF73656 - 0.069 13.6 0.0 0.097 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF104 DUF5495 PF17599.2 ORF73355 - 0.058 13.7 0.5 0.074 13.3 0.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5495) Apq12 PF12716.7 ORF73226 - 9.2 6.3 16.1 1.5 8.8 6.4 2.2 1 1 1 2 2 2 0 Nuclear pore assembly and biogenesis VP_N-CPKC PF11475.8 ORF72725 - 0.3 11.0 7.3 0.56 10.2 0.2 3.1 2 1 1 3 3 3 0 Virion protein N terminal domain Histone PF00125.24 ORF72470 - 1.8e-08 34.8 0.1 2.3e-08 34.4 0.1 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID_20kDa PF03847.13 ORF72470 - 0.032 14.7 0.1 0.059 13.9 0.1 1.4 2 0 0 2 2 2 0 Transcription initiation factor TFIID subunit A ImcF-related_N PF14331.6 ORF72470 - 0.083 12.2 0.0 0.096 12.0 0.0 1.1 1 0 0 1 1 1 0 ImcF-related N-terminal domain CBFD_NFYB_HMF PF00808.23 ORF72470 - 0.12 12.6 0.4 0.18 12.1 0.1 1.5 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone GATA PF00320.27 ORF72359 - 0.19 11.4 1.1 0.19 11.4 1.1 3.1 3 0 0 3 3 3 0 GATA zinc finger Ig_6 PF18452.1 ORF72216 - 0.045 13.3 0.6 0.22 11.1 0.1 2.0 2 0 0 2 2 2 0 Immunoglobulin domain NRIP1_repr_4 PF15690.5 ORF72216 - 0.12 11.6 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 4 K-box PF01486.17 ORF71957 - 0.0026 17.9 4.8 0.0032 17.6 4.8 1.1 1 0 0 1 1 1 1 K-box region DUF1889 PF08986.10 ORF71914 - 0.1 13.0 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) AHD PF17793.1 ORF7189 - 0.065 13.0 1.6 0.32 10.8 0.1 2.1 1 1 1 2 2 2 0 ANC1 homology domain (AHD) Herpes_LMP1 PF05297.11 ORF71789 - 0.14 11.4 6.0 0.15 11.2 6.0 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) eIF3_subunit PF08597.10 ORF71518 - 0.092 12.7 0.2 0.1 12.5 0.2 1.0 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Toxin_14 PF07829.11 ORF71225 - 0.049 13.6 3.0 0.11 12.4 3.0 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein Toxin_14 PF07829.11 ORF70785 - 0.049 13.6 3.0 0.11 12.4 3.0 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein zf-RING-like PF08746.11 ORF70651 - 0.04 14.2 0.7 0.081 13.2 0.7 1.6 1 1 0 1 1 1 0 RING-like domain DUF1889 PF08986.10 ORF70589 - 0.1 13.0 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) PX PF00787.24 ORF70408 - 0.077 13.0 1.5 0.091 12.7 1.5 1.1 1 0 0 1 1 1 0 PX domain VP_N-CPKC PF11475.8 ORF69492 - 0.3 11.0 7.3 0.56 10.2 0.2 3.1 2 1 1 3 3 3 0 Virion protein N terminal domain DUF218 PF02698.17 ORF69329 - 0.067 13.2 1.0 0.074 13.1 1.0 1.1 1 0 0 1 1 1 0 DUF218 domain Orbi_VP3 PF01700.16 ORF69275 - 0.046 11.6 0.7 0.05 11.5 0.7 1.0 1 0 0 1 1 1 0 Orbivirus VP3 (T2) protein Toxin_14 PF07829.11 ORF68309 - 0.049 13.6 3.0 0.11 12.4 3.0 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein MDMPI_N PF11716.8 ORF67793 - 0.064 13.9 0.0 0.073 13.8 0.0 1.1 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain HECT PF00632.25 ORF66763 - 7.1e-08 32.3 0.0 8.6e-08 32.0 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Baculo_11_kDa PF06143.11 ORF66528 - 2.8 7.6 7.3 3.9 7.1 7.3 1.5 1 1 0 1 1 1 0 Baculovirus 11 kDa family ITAM_Cys-rich PF10538.9 ORF66232 - 0.065 13.0 2.9 0.14 11.9 2.9 1.5 1 0 0 1 1 1 0 Immunoreceptor tyrosine-based activation motif Trefoil PF00088.18 ORF6619 - 0.062 13.2 0.1 0.085 12.8 0.1 1.2 1 0 0 1 1 1 0 Trefoil (P-type) domain UL11 PF11094.8 ORF65931 - 0.27 11.1 0.6 0.27 11.1 0.6 2.0 2 0 0 2 2 2 0 Membrane-associated tegument protein PLA2G12 PF06951.11 ORF65071 - 0.039 13.9 0.2 0.039 13.9 0.2 1.0 1 0 0 1 1 1 0 Group XII secretory phospholipase A2 precursor (PLA2G12) JIP_LZII PF16471.5 ORF64339 - 0.052 13.7 0.0 0.079 13.1 0.0 1.3 1 0 0 1 1 1 0 JNK-interacting protein leucine zipper II Serum_albumin PF00273.20 ORF64077 - 0.11 12.3 2.1 0.11 12.2 2.1 1.2 1 0 0 1 1 1 0 Serum albumin family MgrB PF13998.6 ORF63091 - 0.18 11.7 0.1 0.24 11.3 0.1 1.2 1 0 0 1 1 1 0 MgrB protein KAAG1 PF15354.6 ORF63002 - 0.08 13.5 3.7 0.099 13.2 3.7 1.2 1 0 0 1 1 1 0 Kidney-associated antigen 1 SipA_VBS PF17985.1 ORF62407 - 2.9 8.0 4.9 26 5.0 0.0 2.4 2 0 0 2 2 2 0 SipA vinculin binding site DUF979 PF06166.12 ORF62273 - 0.037 13.2 0.1 0.041 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF979) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks414.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks414.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks414.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks414.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:42:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Proton_antipo_N PF00662.20 ORF61704 - 0.04 14.0 0.8 0.046 13.8 0.8 1.2 1 0 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MUG113 PF13455.6 ORF61515 - 0.15 12.7 0.0 0.2 12.4 0.0 1.1 1 0 0 1 1 1 0 Meiotically up-regulated gene 113 DUF4514 PF14986.6 ORF60853 - 0.11 12.5 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4514) DUF2953 PF11167.8 ORF60703 - 0.14 12.2 0.8 0.58 10.3 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2953) SIP1 PF04938.12 ORF6028 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) Tetradecapep PF08187.11 ORF59907 - 0.074 13.1 0.0 0.074 13.1 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family ArenaCapSnatch PF17296.2 ORF59403 - 0.033 13.6 0.1 0.036 13.5 0.1 1.0 1 0 0 1 1 1 0 Arenavirus cap snatching domain FerA PF08165.11 ORF59403 - 0.12 12.3 0.7 0.24 11.4 0.3 1.7 1 1 1 2 2 2 0 FerA (NUC095) domain XhlA PF10779.9 ORF59403 - 0.15 12.3 2.5 0.81 9.9 0.5 2.0 1 1 1 2 2 2 0 Haemolysin XhlA SBP_bac_3 PF00497.20 ORF59124 - 0.00024 20.6 0.3 0.00034 20.1 0.3 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 BChl_A PF02327.17 ORF59027 - 0.15 10.8 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Bacteriochlorophyll A protein bZIP_2 PF07716.15 ORF58302 - 1.6e-05 24.9 1.1 2.5e-05 24.3 1.1 1.3 1 0 0 1 1 1 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF58302 - 0.00044 20.3 0.6 0.00058 19.9 0.6 1.3 1 0 0 1 1 1 1 bZIP transcription factor ABC_tran_CTD PF16326.5 ORF58302 - 0.0057 16.9 2.6 0.0065 16.7 2.6 1.4 1 1 0 1 1 1 1 ABC transporter C-terminal domain DUF4354 PF14263.6 ORF58302 - 0.0095 15.7 0.1 0.011 15.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4354) FlxA PF14282.6 ORF58302 - 0.019 15.0 0.6 0.022 14.7 0.6 1.2 1 0 0 1 1 1 0 FlxA-like protein DUF2057 PF09829.9 ORF58302 - 0.043 14.0 0.2 0.048 13.8 0.2 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) BRI3BP PF14965.6 ORF58302 - 0.13 11.8 0.3 0.15 11.6 0.3 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 Paramyx_P_V_C PF03210.13 ORF58272 - 0.29 10.9 4.6 0.35 10.6 4.6 1.1 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal ZZ PF00569.17 ORF58247 - 0.042 13.7 3.1 0.045 13.6 1.8 1.7 1 1 1 2 2 2 0 Zinc finger, ZZ type DUF1619 PF07773.11 ORF57739 - 7.1 6.5 7.1 7.7 6.3 7.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1619) DDA1 PF10172.9 ORF57729 - 0.52 10.6 3.3 0.67 10.3 3.3 1.1 1 0 0 1 1 1 0 Det1 complexing ubiquitin ligase Herpes_pp85 PF04637.12 ORF57729 - 0.99 7.7 9.8 1.1 7.6 9.8 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Ribosomal_L9_C PF03948.14 ORF57467 - 0.12 12.8 0.0 0.27 11.7 0.0 1.5 1 1 0 1 1 1 0 Ribosomal protein L9, C-terminal domain Sporozoite_P67 PF05642.11 ORF57396 - 0.33 9.0 0.9 0.35 8.9 0.9 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen zf-met PF12874.7 ORF55348 - 0.0051 17.2 1.8 0.01 16.2 1.8 1.6 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2 PF00096.26 ORF55348 - 0.015 15.8 2.3 0.015 15.8 2.3 1.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 ORF55348 - 0.03 14.3 2.1 0.043 13.8 2.1 1.2 1 0 0 1 1 1 0 C2H2-type zinc finger TF_Otx PF03529.13 ORF54844 - 0.028 14.8 0.2 0.033 14.6 0.2 1.2 1 0 0 1 1 1 0 Otx1 transcription factor FrpC PF06901.12 ORF53994 - 0.15 11.6 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 RTX iron-regulated protein FrpC YacG PF03884.14 ORF53682 - 0.066 13.0 1.8 0.1 12.4 1.8 1.3 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG zf-Di19 PF05605.12 ORF53682 - 0.067 13.5 0.4 0.087 13.1 0.4 1.3 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf_C2H2_10 PF18414.1 ORF53682 - 0.17 11.5 2.1 0.29 10.7 1.4 1.9 1 1 0 1 1 1 0 C2H2 type zinc-finger Gag_p17 PF00540.18 ORF51935 - 0.12 12.4 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 gag gene protein p17 (matrix protein) RestrictionMunI PF11407.8 ORF51565 - 0.023 14.4 0.4 0.024 14.3 0.4 1.0 1 0 0 1 1 1 0 Type II restriction enzyme MunI tRNA_anti-codon PF01336.25 ORF51565 - 0.084 12.9 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain SyrA PF11089.8 ORF51560 - 0.086 12.9 1.4 0.11 12.6 0.1 1.8 2 0 0 2 2 2 0 Exopolysaccharide production repressor DUF2953 PF11167.8 ORF51272 - 0.14 12.2 0.8 0.58 10.3 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2953) FANCAA PF15146.6 ORF50993 - 0.022 13.8 0.6 0.025 13.7 0.6 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated MCM_bind PF09739.9 ORF50993 - 0.046 12.2 0.0 0.046 12.2 0.0 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Lactate_perm PF02652.14 ORF50647 - 0.029 13.1 0.1 0.032 13.0 0.1 1.0 1 0 0 1 1 1 0 L-lactate permease MORN PF02493.20 ORF49561 - 1.1e-17 62.8 15.2 3.5e-06 26.6 1.1 3.3 3 0 0 3 3 3 3 MORN repeat DUF2610 PF11020.8 ORF49561 - 0.18 11.7 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) MIIP PF15734.5 ORF49511 - 0.024 14.1 0.3 0.027 14.0 0.3 1.0 1 0 0 1 1 1 0 Migration and invasion-inhibitory PfaD_N PF18328.1 ORF49414 - 0.12 12.3 0.1 0.33 10.9 0.0 1.7 2 0 0 2 2 2 0 Fatty acid synthase subunit PfaD N-terminal domain Com_YlbF PF06133.11 ORF49223 - 0.025 15.2 0.2 0.028 15.0 0.2 1.1 1 0 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA Abhydrolase_9_N PF15420.6 ORF49172 - 0.072 13.1 0.2 0.077 13.0 0.2 1.0 1 0 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus Cytochrom_C_asm PF01578.20 ORF48934 - 1.2e-13 51.4 2.9 1.2e-13 51.4 2.9 1.0 1 0 0 1 1 1 1 Cytochrome C assembly protein TraE PF05309.11 ORF48493 - 0.88 8.9 6.0 1.1 8.6 6.0 1.0 1 0 0 1 1 1 0 TraE protein Perm-CXXC PF15629.6 ORF48490 - 0.084 13.2 0.9 7.5 6.9 0.0 2.3 2 0 0 2 2 2 0 Permuted single zf-CXXC unit NOA36 PF06524.12 ORF48341 - 0.023 14.0 8.0 0.023 14.0 8.0 1.1 1 0 0 1 1 1 0 NOA36 protein Keratin PF02422.16 ORF48341 - 0.047 13.4 1.3 0.058 13.1 1.3 1.2 1 0 0 1 1 1 0 Keratin TMEM247 PF15444.6 ORF48081 - 0.33 11.0 0.9 0.36 10.8 0.9 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 APOBEC4 PF18775.1 ORF48020 - 0.053 13.7 0.5 0.072 13.3 0.5 1.3 1 0 0 1 1 1 0 APOBEC4 Toxin_14 PF07829.11 ORF48017 - 0.049 13.6 3.0 0.11 12.4 3.0 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein Ndc1_Nup PF09531.10 ORF47816 - 2.1 7.0 6.1 2.2 6.9 6.1 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PfaD_N PF18328.1 ORF47813 - 0.12 12.3 0.1 0.33 10.9 0.0 1.7 2 0 0 2 2 2 0 Fatty acid synthase subunit PfaD N-terminal domain SpoVR PF04293.13 ORF47496 - 0.074 11.7 1.4 0.076 11.7 1.4 1.0 1 0 0 1 1 1 0 SpoVR like protein DUF5540 PF17694.1 ORF47028 - 0.21 12.1 1.8 0.26 11.8 1.8 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5540) DUF5494 PF17598.2 ORF46625 - 0.073 13.2 3.0 0.075 13.2 3.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5494) Defensin_RK-1 PF17860.1 ORF46228 - 0.056 13.9 0.1 0.089 13.3 0.1 1.3 1 0 0 1 1 1 0 RK-1-like defensin PTS_EIIC PF02378.18 ORF46122 - 0.055 12.5 0.0 0.058 12.4 0.0 1.0 1 0 0 1 1 1 0 Phosphotransferase system, EIIC Toxin_33 PF08121.11 ORF45971 - 0.067 13.0 2.0 0.067 13.0 2.0 2.3 3 0 0 3 3 3 0 Waglerin family AP4E_app_platf PF14807.6 ORF45834 - 0.0043 17.4 0.0 0.0047 17.3 0.0 1.0 1 0 0 1 1 1 1 Adaptin AP4 complex epsilon appendage platform FDX-ACB PF03147.14 ORF45834 - 0.046 14.1 0.1 0.047 14.1 0.1 1.2 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain DUF5540 PF17694.1 ORF45813 - 0.21 12.1 1.8 0.26 11.8 1.8 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5540) TT_ORF1 PF02956.14 ORF4516 - 8.9 4.9 12.2 9.2 4.8 12.2 1.0 1 0 0 1 1 1 0 TT viral orf 1 ThrE_2 PF12821.7 ORF45008 - 0.02 15.0 0.2 0.02 15.0 0.2 1.1 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE PDEase_I_N PF08499.12 ORF44690 - 0.0055 16.5 0.0 0.0079 16.0 0.0 1.2 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase N-terminal CYYR1 PF10873.8 ORF43969 - 0.12 12.9 0.2 0.12 12.8 0.2 1.2 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 Ank_2 PF12796.7 ORF43218 - 0.0014 19.2 0.0 0.0016 19.0 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF43218 - 0.073 13.7 0.0 3.9 8.3 0.0 2.3 2 1 0 2 2 2 0 Ankyrin repeat Thioredoxin_11 PF18078.1 ORF42799 - 0.057 13.5 1.3 0.063 13.4 1.3 1.1 1 0 0 1 1 1 0 Thioredoxin-like SNTX domain DUF1848 PF08902.11 ORF41679 - 0.16 11.6 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1848) DUF4685 PF15737.5 ORF41468 - 0.0069 16.8 0.7 0.0074 16.7 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4685) Phage_T4_Ndd PF06591.11 ORF40677 - 0.045 13.5 0.0 0.049 13.4 0.0 1.1 1 0 0 1 1 1 0 T4-like phage nuclear disruption protein (Ndd) TF_Otx PF03529.13 ORF40571 - 0.028 14.8 0.2 0.033 14.6 0.2 1.2 1 0 0 1 1 1 0 Otx1 transcription factor TMEM208_SND2 PF05620.11 ORF40419 - 0.81 9.5 3.6 1 9.1 3.6 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 NYD-SP28 PF14772.6 ORF40401 - 0.025 14.6 0.9 0.027 14.5 0.9 1.1 1 0 0 1 1 1 0 Sperm tail Competence PF03772.16 ORF40018 - 0.64 9.3 8.3 0.69 9.1 8.3 1.0 1 0 0 1 1 1 0 Competence protein Lactate_perm PF02652.14 ORF39991 - 0.029 13.1 0.1 0.032 13.0 0.1 1.0 1 0 0 1 1 1 0 L-lactate permease PocR PF10114.9 ORF39687 - 0.029 14.2 1.0 0.03 14.1 1.0 1.1 1 0 0 1 1 1 0 Sensory domain found in PocR DUF3043 PF11241.8 ORF3958 - 8.1 6.4 6.2 8.7 6.3 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) ANAPC3 PF12895.7 ORF39398 - 0.078 13.2 2.1 2.5 8.4 0.1 2.1 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 Spiralin PF05215.13 ORF39327 - 0.2 10.9 0.0 0.21 10.9 0.0 1.0 1 0 0 1 1 1 0 Spiralin SyrA PF11089.8 ORF39221 - 0.086 12.9 1.4 0.11 12.6 0.1 1.8 2 0 0 2 2 2 0 Exopolysaccharide production repressor Histone PF00125.24 ORF39019 - 1.9e-08 34.7 0.4 2.4e-08 34.4 0.4 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 ImcF-related_N PF14331.6 ORF39019 - 0.027 13.8 0.1 0.031 13.6 0.1 1.1 1 0 0 1 1 1 0 ImcF-related N-terminal domain CBFD_NFYB_HMF PF00808.23 ORF39019 - 0.046 14.0 0.1 0.075 13.3 0.1 1.4 1 0 0 1 1 1 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID_20kDa PF03847.13 ORF39019 - 0.15 12.6 0.1 0.2 12.2 0.1 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A DUF1949 PF09186.11 ORF38952 - 0.11 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1949) TOM20_plant PF06552.12 ORF38852 - 0.076 12.8 0.1 0.082 12.6 0.1 1.1 1 0 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 HGWP PF03578.15 ORF38000 - 0.09 12.3 0.6 0.15 11.6 0.6 1.4 1 0 0 1 1 1 0 HGWP repeat PCAF_N PF06466.11 ORF36881 - 0.48 9.9 4.5 0.53 9.8 4.5 1.0 1 0 0 1 1 1 0 PCAF (P300/CBP-associated factor) N-terminal domain Flu_M2 PF00599.17 ORF36457 - 0.1 12.7 0.5 0.11 12.6 0.5 1.2 1 0 0 1 1 1 0 Influenza Matrix protein (M2) VP_N-CPKC PF11475.8 ORF36177 - 0.3 11.0 7.3 0.56 10.2 0.2 3.1 2 1 1 3 3 3 0 Virion protein N terminal domain ERGIC_N PF13850.6 ORF36032 - 0.0099 16.2 0.2 0.01 16.2 0.2 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Imm17 PF15562.6 ORF36032 - 0.019 14.8 0.3 0.03 14.2 0.3 1.4 1 0 0 1 1 1 0 Immunity protein 17 DUF5540 PF17694.1 ORF35930 - 0.21 12.1 1.8 0.26 11.8 1.8 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5540) Anoctamin PF04547.12 ORF35199 - 0.015 14.1 2.6 0.015 14.1 2.6 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel 2OG-FeII_Oxy_3 PF13640.6 ORF34869 - 0.005 17.7 0.4 0.0068 17.3 0.4 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily FAM72 PF14976.6 ORF34773 - 0.077 13.1 0.0 0.079 13.1 0.0 1.0 1 0 0 1 1 1 0 FAM72 protein eIF3_subunit PF08597.10 ORF34399 - 0.092 12.7 0.2 0.1 12.5 0.2 1.0 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Doppel PF11466.8 ORF34211 - 0.055 13.1 3.4 0.1 12.3 3.4 1.5 1 0 0 1 1 1 0 Prion-like protein Doppel TF_Otx PF03529.13 ORF33889 - 0.028 14.8 0.2 0.033 14.6 0.2 1.2 1 0 0 1 1 1 0 Otx1 transcription factor AAA_lid_8 PF17868.1 ORF33793 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain zinc-ribbons_6 PF07191.12 ORF33728 - 0.01 15.8 4.6 0.012 15.6 4.6 1.3 1 1 0 1 1 1 0 zinc-ribbons Phage_T4_Ndd PF06591.11 ORF33728 - 0.19 11.5 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 T4-like phage nuclear disruption protein (Ndd) SfLAP PF11139.8 ORF33278 - 0.27 10.6 0.0 0.29 10.6 0.0 1.0 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein DUF2786 PF10979.8 ORF33228 - 0.3 11.1 3.0 0.56 10.2 3.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2786) Hpre_diP_synt_I PF07456.11 ORF33070 - 0.065 13.2 0.2 0.065 13.2 0.2 1.0 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase component I zf-BED PF02892.15 ORF32966 - 0.53 10.4 6.7 1.2 9.3 6.7 1.5 1 1 0 1 1 1 0 BED zinc finger INSC_LBD PF16748.5 ORF32729 - 0.073 12.5 0.1 0.11 11.9 0.1 1.4 1 0 0 1 1 1 0 Inscuteable LGN-binding domain 2TM PF13239.6 ORF32206 - 0.13 12.6 3.1 0.16 12.3 3.1 1.1 1 0 0 1 1 1 0 2TM domain GBP_PSP PF02425.15 ORF32068 - 0.064 12.9 0.2 0.064 12.9 0.2 1.9 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide KH_1 PF00013.29 ORF31856 - 0.14 12.0 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 KH domain Doppel PF11466.8 ORF31821 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel STOP PF05217.12 ORF29931 - 0.00049 20.4 1.4 0.0009 19.5 1.4 1.5 1 0 0 1 1 1 1 STOP protein Lactate_perm PF02652.14 ORF29856 - 0.029 13.1 0.1 0.032 13.0 0.1 1.0 1 0 0 1 1 1 0 L-lactate permease RestrictionMunI PF11407.8 ORF28931 - 0.023 14.4 0.4 0.024 14.3 0.4 1.0 1 0 0 1 1 1 0 Type II restriction enzyme MunI tRNA_anti-codon PF01336.25 ORF28931 - 0.084 12.9 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Colicin_K PF17500.2 ORF28565 - 0.12 13.0 0.4 0.58 10.8 0.4 1.9 1 1 0 1 1 1 0 Colicin-K DUF104 PF01954.16 ORF28547 - 0.072 13.5 0.0 0.097 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF104 AAA PF00004.29 ORF27542 - 0.13 12.7 0.0 0.19 12.1 0.0 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Anoctamin PF04547.12 ORF27481 - 0.015 14.1 2.6 0.015 14.1 2.6 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel G10 PF01125.17 ORF27413 - 0.093 12.5 5.0 0.13 12.0 4.9 1.3 1 1 0 1 1 1 0 G10 protein Rdx PF10262.9 ORF27186 - 0.28 11.4 0.5 0.28 11.4 0.5 2.1 1 1 1 2 2 2 0 Rdx family RAI1 PF08652.11 ORF27178 - 0.11 12.7 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 RAI1 like PD-(D/E)XK nuclease PTH2 PF01981.16 ORF2714 - 0.1 12.9 0.1 0.11 12.8 0.1 1.1 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase PTH2 SyrA PF11089.8 ORF27022 - 0.086 12.9 1.4 0.11 12.6 0.1 1.8 2 0 0 2 2 2 0 Exopolysaccharide production repressor Anoctamin PF04547.12 ORF26176 - 0.015 14.1 2.6 0.015 14.1 2.6 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel DUF4186 PF13811.6 ORF25945 - 0.48 10.5 4.2 0.51 10.4 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) bPH_3 PF14470.6 ORF24919 - 0.049 14.0 0.2 0.061 13.7 0.2 1.3 1 1 0 1 1 1 0 Bacterial PH domain PocR PF10114.9 ORF24437 - 0.029 14.2 1.0 0.03 14.1 1.0 1.1 1 0 0 1 1 1 0 Sensory domain found in PocR DUF3270 PF11674.8 ORF24354 - 9.8 6.4 12.2 10 6.4 11.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) Dala_Dala_lig_C PF07478.13 ORF24153 - 0.12 11.9 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus FANCAA PF15146.6 ORF24127 - 0.022 13.8 0.6 0.025 13.7 0.6 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated MCM_bind PF09739.9 ORF24127 - 0.046 12.2 0.0 0.046 12.2 0.0 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Toxin_20 PF08089.11 ORF24045 - 0.079 13.1 0.2 0.12 12.5 0.2 1.3 1 0 0 1 1 1 0 Huwentoxin-II family TF_Otx PF03529.13 ORF24 - 0.028 14.8 0.2 0.033 14.6 0.2 1.2 1 0 0 1 1 1 0 Otx1 transcription factor Acetyltransf_9 PF13527.7 ORF22807 - 0.001 19.2 0.0 0.0011 19.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF22807 - 0.098 13.1 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Tetradecapep PF08187.11 ORF22751 - 0.074 13.1 0.0 0.074 13.1 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family MHYT PF03707.16 ORF2269 - 0.099 12.8 0.6 0.11 12.6 0.2 1.4 2 0 0 2 2 2 0 Bacterial signalling protein N terminal repeat DUF3384 PF11864.8 ORF22242 - 0.25 10.2 2.2 0.28 10.0 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3384) Anthrax_toxA PF03497.16 ORF21756 - 0.072 13.2 0.1 0.072 13.2 0.1 1.1 1 0 0 1 1 1 0 Anthrax toxin LF subunit Phage_30_3 PF08010.11 ORF21756 - 0.093 12.5 0.1 0.096 12.5 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage protein GP30.3 Ribosomal_L9_C PF03948.14 ORF20068 - 0.12 12.8 0.0 0.27 11.7 0.0 1.5 1 1 0 1 1 1 0 Ribosomal protein L9, C-terminal domain DUF4607 PF15380.6 ORF19862 - 0.0056 16.2 0.0 0.0061 16.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4607) COX2_TM PF02790.15 ORF1986 - 0.01 15.9 0.2 0.012 15.7 0.2 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane domain TMEM100 PF16311.5 ORF1986 - 0.071 12.7 0.2 0.085 12.4 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 100 Leptin PF02024.15 ORF19209 - 0.016 15.0 0.0 0.016 15.0 0.0 1.1 1 0 0 1 1 1 0 Leptin Doppel PF11466.8 ORF19121 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel DUF3557 PF12078.8 ORF18342 - 0.038 14.0 0.1 0.042 13.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3557) Glyco_hydro_88 PF07470.13 ORF18208 - 0.24 10.5 0.4 0.23 10.5 0.4 1.0 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 DUF4096 PF13340.6 ORF17636 - 0.13 12.5 0.1 0.15 12.3 0.1 1.1 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) DUF2017 PF09438.10 ORF17413 - 0.13 12.1 0.7 0.12 12.3 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2017) Proton_antipo_N PF00662.20 ORF16994 - 0.04 14.0 0.8 0.046 13.8 0.8 1.2 1 0 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Intg_mem_TP0381 PF09529.10 ORF16112 - 0.0092 15.5 2.4 0.011 15.2 2.4 1.0 1 0 0 1 1 1 1 Integral membrane protein (intg_mem_TP0381) DUF4630 PF15443.6 ORF15969 - 0.025 14.8 0.0 0.028 14.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4630) Tetradecapep PF08187.11 ORF15824 - 0.074 13.1 0.0 0.074 13.1 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family COMPASS-Shg1 PF05205.12 ORF15281 - 0.0075 17.0 0.2 0.0076 16.9 0.2 1.0 1 0 0 1 1 1 1 COMPASS (Complex proteins associated with Set1p) component shg1 HTH_48 PF17906.1 ORF15281 - 0.13 12.4 0.1 0.17 12.0 0.1 1.2 1 0 0 1 1 1 0 HTH domain in Mos1 transposase Doppel PF11466.8 ORF152350 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel DUF3008 PF11450.8 ORF15226 - 0.1 12.8 0.2 0.14 12.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknwon function (DUF3008) Noggin PF05806.12 ORF152223 - 0.035 14.0 0.4 0.038 13.9 0.4 1.0 1 0 0 1 1 1 0 Noggin Defensin_2 PF01097.18 ORF152154 - 0.011 15.6 2.3 0.017 15.1 2.3 1.3 1 0 0 1 1 1 0 Arthropod defensin APA3_viroporin PF11289.8 ORF150793 - 0.37 10.3 4.1 0.4 10.2 4.1 1.0 1 0 0 1 1 1 0 Coronavirus accessory protein 3a Chordopox_L2 PF05803.12 ORF150525 - 0.04 13.8 3.9 0.049 13.5 3.9 1.3 1 0 0 1 1 1 0 Chordopoxvirus L2 protein DUF2527 PF10736.9 ORF150402 - 0.032 14.1 1.7 0.077 12.8 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) HTH_29 PF13551.6 ORF150402 - 0.056 13.5 0.1 0.071 13.1 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn helix Toxin_38 PF14866.6 ORF150193 - 0.13 12.6 0.0 0.13 12.6 0.0 2.0 2 0 0 2 2 2 0 Potassium channel toxin TMEM247 PF15444.6 ORF150112 - 3.9 7.5 5.7 3.9 7.5 5.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 247 PRIMA1 PF16101.5 ORF149215 - 0.73 9.9 10.6 0.48 10.5 9.5 1.4 1 1 0 1 1 1 0 Proline-rich membrane anchor 1 LMWPc PF01451.21 ORF148584 - 8.8e-15 55.3 0.0 9.8e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase DUF4921 PF16268.5 ORF148268 - 0.092 11.5 0.2 0.094 11.5 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4921) SyrA PF11089.8 ORF147857 - 0.086 12.9 1.4 0.11 12.6 0.1 1.8 2 0 0 2 2 2 0 Exopolysaccharide production repressor Tad PF13400.6 ORF147630 - 0.026 14.8 1.4 0.026 14.8 1.4 1.1 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like Doppel PF11466.8 ORF147324 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel DUF839 PF05787.13 ORF146536 - 0.00023 20.4 0.1 0.00025 20.3 0.1 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF839) UCH PF00443.29 ORF146041 - 3.1e-14 53.1 0.2 3.6e-14 52.9 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF146041 - 0.013 15.1 0.0 0.017 14.7 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Proton_antipo_N PF00662.20 ORF145332 - 0.04 14.0 0.8 0.046 13.8 0.8 1.2 1 0 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NinE PF05322.11 ORF144815 - 0.011 15.6 0.9 0.021 14.7 0.9 1.4 1 0 0 1 1 1 0 NINE Protein MarB PF13999.6 ORF144021 - 0.0072 16.2 0.2 0.0096 15.7 0.2 1.2 1 0 0 1 1 1 1 MarB protein zf-dskA_traR PF01258.17 ORF143839 - 9.7e-09 35.0 9.7 1.2e-08 34.7 9.7 1.1 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger DUF2256 PF10013.9 ORF143839 - 0.022 14.9 6.2 1.1 9.4 2.1 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) C1_1 PF00130.22 ORF143839 - 0.029 14.3 4.4 0.029 14.3 4.4 1.9 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2116 PF09889.9 ORF143839 - 3.2 7.8 8.5 16 5.6 8.5 1.9 1 1 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) MIIP PF15734.5 ORF143710 - 0.024 14.1 0.3 0.027 14.0 0.3 1.0 1 0 0 1 1 1 0 Migration and invasion-inhibitory AAA_lid_8 PF17868.1 ORF142069 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain BORCS6 PF10157.9 ORF141590 - 0.023 14.9 0.1 0.027 14.7 0.1 1.1 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 FliJ PF02050.16 ORF141055 - 0.0017 18.6 0.5 0.0018 18.5 0.5 1.0 1 0 0 1 1 1 1 Flagellar FliJ protein ATG16 PF08614.11 ORF141055 - 0.01 16.1 3.2 0.011 16.0 3.2 1.0 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF4162 PF13732.6 ORF141055 - 0.018 15.8 0.2 0.02 15.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) DivIC PF04977.15 ORF141055 - 0.024 14.4 1.3 0.029 14.2 1.3 1.1 1 0 0 1 1 1 0 Septum formation initiator TraE PF05309.11 ORF140816 - 0.88 8.9 6.0 1.1 8.6 6.0 1.0 1 0 0 1 1 1 0 TraE protein PRIMA1 PF16101.5 ORF140436 - 0.73 9.9 10.6 0.48 10.5 9.5 1.4 1 1 0 1 1 1 0 Proline-rich membrane anchor 1 DUF3825 PF12873.7 ORF140417 - 0.074 12.5 0.0 0.076 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3825) PTPA PF03095.15 ORF140336 - 0.0051 16.3 0.9 0.0055 16.2 0.9 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein DicB PF05358.11 ORF140336 - 0.096 12.8 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 DicB protein YycI PF09648.10 ORF139903 - 0.044 13.4 0.0 0.049 13.2 0.0 1.0 1 0 0 1 1 1 0 YycH protein AAA_lid_8 PF17868.1 ORF139656 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain ApoB100_C PF12491.8 ORF139590 - 0.0095 15.9 0.5 0.017 15.1 0.5 1.5 1 0 0 1 1 1 1 Apolipoprotein B100 C terminal DUF3660 PF12398.8 ORF13957 - 0.1 12.7 0.1 3.4 7.8 0.1 2.1 2 0 0 2 2 2 0 Receptor serine/threonine kinase TF_Otx PF03529.13 ORF139478 - 0.028 14.8 0.2 0.033 14.6 0.2 1.2 1 0 0 1 1 1 0 Otx1 transcription factor RACo_C_ter PF14574.6 ORF139131 - 0.26 10.3 0.4 0.29 10.2 0.4 1.0 1 0 0 1 1 1 0 C-terminal domain of RACo the ASKHA domain Dus PF01207.17 ORF138433 - 0.12 11.4 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) DUF4124 PF13511.6 ORF138331 - 0.023 15.0 0.0 0.023 15.0 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4124) RhoGEF67_u1 PF16615.5 ORF138115 - 0.066 13.7 7.1 0.084 13.4 6.8 1.3 1 1 0 1 1 1 0 Unstructured region one on RhoGEF 6 and 7 Metallothio_Euk PF12749.7 ORF138110 - 2.2 8.5 16.5 13 6.0 16.5 2.1 1 1 0 1 1 1 0 Eukaryotic metallothionein Flu_NS1 PF00600.19 ORF13693 - 0.07 12.7 0.0 0.077 12.5 0.0 1.1 1 0 0 1 1 1 0 Influenza non-structural protein (NS1) DUF2824 PF11039.8 ORF136517 - 0.27 11.2 0.0 0.27 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2824) KH_10 PF17905.1 ORF136476 - 0.08 13.4 0.2 0.097 13.1 0.2 1.1 1 0 0 1 1 1 0 GLD-3 KH domain 5 IncE PF17627.2 ORF136318 - 0.039 14.0 4.6 0.04 13.9 4.6 1.0 1 0 0 1 1 1 0 Inclusion membrane protein E DUF3290 PF11694.8 ORF136205 - 0.011 15.7 0.3 0.012 15.5 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) TMEM52 PF14979.6 ORF136205 - 7.1 6.5 7.5 7.3 6.5 2.0 2.0 1 1 1 2 2 2 0 Transmembrane 52 FANCAA PF15146.6 ORF136104 - 0.022 13.8 0.6 0.025 13.7 0.6 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated MCM_bind PF09739.9 ORF136104 - 0.046 12.2 0.0 0.046 12.2 0.0 1.2 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor DUF2269 PF10027.9 ORF135755 - 0.013 15.6 0.1 0.014 15.5 0.1 1.1 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2269) FANCL_C PF11793.8 ORF135684 - 0.0094 16.1 0.2 0.015 15.4 0.2 1.2 1 0 0 1 1 1 1 FANCL C-terminal domain MgrB PF13998.6 ORF135564 - 0.18 11.7 0.1 0.24 11.3 0.1 1.2 1 0 0 1 1 1 0 MgrB protein Rota_NS6 PF04866.12 ORF13545 - 0.068 13.4 1.4 0.076 13.2 1.4 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 6 PDEase_I_N PF08499.12 ORF135349 - 0.0055 16.5 0.0 0.0079 16.0 0.0 1.2 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase N-terminal TM140 PF14985.6 ORF133504 - 0.064 12.8 3.4 0.076 12.6 3.4 1.1 1 0 0 1 1 1 0 TM140 protein family DUF2290 PF10053.9 ORF133151 - 0.0011 18.5 0.1 0.0013 18.3 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2290) HCNGP PF07818.13 ORF133114 - 0.2 12.4 0.0 0.21 12.3 0.0 1.1 1 0 0 1 1 1 0 HCNGP-like protein FabA PF07977.13 ORF133095 - 0.0014 18.3 0.1 0.0015 18.1 0.1 1.1 1 0 0 1 1 1 1 FabA-like domain KKLCAg1 PF15204.6 ORF133095 - 0.015 15.4 0.1 0.018 15.1 0.1 1.2 1 0 0 1 1 1 0 Kita-kyushu lung cancer antigen 1 Ribonuc_L-PSP PF01042.21 ORF133058 - 0.062 13.3 0.2 0.068 13.2 0.2 1.1 1 0 0 1 1 1 0 Endoribonuclease L-PSP DUF4791 PF16039.5 ORF132953 - 0.059 12.9 0.2 0.07 12.7 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4791) Cadherin_C_2 PF16492.5 ORF132944 - 0.033 14.9 0.1 0.038 14.7 0.1 1.1 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal WBP-1 PF11669.8 ORF132944 - 0.067 13.8 0.5 0.084 13.5 0.5 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 SIT PF15330.6 ORF132944 - 0.15 12.5 0.1 0.16 12.4 0.1 1.2 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT PRIMA1 PF16101.5 ORF132845 - 0.097 12.7 2.4 0.11 12.5 2.4 1.0 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CA_like PF10563.9 ORF132789 - 0.054 13.4 0.1 0.054 13.4 0.1 1.0 1 0 0 1 1 1 0 Putative carbonic anhydrase FAM91_N PF14647.6 ORF132403 - 0.036 13.3 0.2 0.041 13.2 0.2 1.0 1 0 0 1 1 1 0 FAM91 N-terminus FANCI_HD1 PF14679.6 ORF132364 - 0.088 12.8 0.2 0.13 12.2 0.1 1.4 1 1 1 2 2 2 0 FANCI helical domain 1 Insulin_TMD PF17870.1 ORF132364 - 9.2 6.4 7.5 6.2 7.0 0.4 2.3 2 1 0 2 2 2 0 Insulin receptor trans-membrane segment Cyd_oper_YbgE PF09600.10 ORF132360 - 1.2e-26 92.8 4.0 1.4e-26 92.7 4.0 1.0 1 0 0 1 1 1 1 Cyd operon protein YbgE (Cyd_oper_YbgE) Form-deh_trans PF09163.11 ORF132360 - 0.41 10.4 3.2 0.62 9.9 0.3 2.1 1 1 1 2 2 2 0 Formate dehydrogenase N, transmembrane IBR PF01485.21 ORF132168 - 0.057 13.7 0.4 0.057 13.7 0.4 2.1 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain Phage_GPD PF05954.11 ORF132127 - 0.17 11.1 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Phage late control gene D protein (GPD) RINGv PF12906.7 ORF13209 - 0.037 14.2 0.7 0.12 12.6 0.2 1.9 2 0 0 2 2 2 0 RING-variant domain DUF3927 PF13064.6 ORF131908 - 0.056 13.4 0.1 0.092 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) DUF2290 PF10053.9 ORF129788 - 0.0011 18.5 0.1 0.0013 18.3 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2290) NYD-SP28 PF14772.6 ORF129266 - 0.025 14.6 0.9 0.027 14.5 0.9 1.1 1 0 0 1 1 1 0 Sperm tail Toxin_14 PF07829.11 ORF129161 - 0.057 13.4 1.2 0.077 12.9 0.3 1.7 2 0 0 2 2 2 0 Alpha-A conotoxin PIVA-like protein TetR_C_37 PF18665.1 ORF128976 - 0.0078 16.8 0.3 0.0085 16.7 0.3 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain Ribosomal_L29e PF01779.17 ORF128766 - 3.2e-20 72.2 9.3 3.2e-20 72.2 9.3 1.9 1 1 1 2 2 2 1 Ribosomal L29e protein family SfsA_N PF17746.1 ORF128523 - 0.16 12.2 0.2 0.17 12.0 0.2 1.4 1 1 0 1 1 1 0 SfsA N-terminal OB domain ArsA_HSP20 PF17886.1 ORF128416 - 0.011 15.3 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 0 HSP20-like domain found in ArsA DUF4397 PF14344.6 ORF128129 - 0.037 14.8 0.0 0.042 14.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4397) Benyvirus_P25 PF05744.11 ORF127974 - 0.3 10.3 2.9 0.5 9.6 1.7 1.7 1 1 1 2 2 2 0 Benyvirus P25/P26 protein Oxidored_q5_N PF01059.17 ORF12718 - 0.13 12.4 0.0 0.13 12.3 0.0 1.0 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Toxin_14 PF07829.11 ORF12651 - 0.049 13.6 3.0 0.11 12.4 3.0 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein DUF3119 PF11317.8 ORF126187 - 0.78 10.0 5.8 0.89 9.8 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3119) TMF_DNA_bd PF12329.8 ORF126100 - 0.0023 17.9 2.0 0.0029 17.6 2.0 1.2 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding SAB PF04382.13 ORF126100 - 0.42 10.7 2.0 0.67 10.1 0.4 2.0 1 1 1 2 2 2 0 SAB domain FAM176 PF14851.6 ORF125896 - 0.036 13.7 0.3 0.044 13.5 0.3 1.1 1 0 0 1 1 1 0 FAM176 family LrgA PF03788.14 ORF125619 - 0.091 12.7 0.0 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 LrgA family MIT_LIKE_ACTX PF17556.2 ORF125619 - 0.17 12.5 0.0 8.2 7.1 0.0 2.1 2 0 0 2 2 2 0 MIT-like atracotoxin family Peptidase_M17 PF00883.21 ORF125447 - 9.1e-06 25.2 0.0 9.3e-06 25.1 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain SRA1 PF07304.11 ORF125384 - 0.022 14.6 0.0 0.022 14.6 0.0 1.1 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) Toxin_14 PF07829.11 ORF125177 - 0.049 13.6 3.0 0.11 12.4 3.0 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein NP1-WLL PF11733.8 ORF125147 - 0.13 12.0 1.1 0.13 12.0 1.1 1.1 1 0 0 1 1 1 0 Non-capsid protein NP1 Csc2 PF18320.1 ORF125147 - 1.3 7.9 3.4 1.2 8.0 3.4 1.0 1 0 0 1 1 1 0 Csc2 Crispr PfaD_N PF18328.1 ORF124467 - 0.12 12.3 0.1 0.33 10.9 0.0 1.7 2 0 0 2 2 2 0 Fatty acid synthase subunit PfaD N-terminal domain DUF3927 PF13064.6 ORF123703 - 0.056 13.4 0.1 0.092 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3927) Tetradecapep PF08187.11 ORF123255 - 0.074 13.1 0.0 0.074 13.1 0.0 1.8 3 0 0 3 3 3 0 Myoactive tetradecapeptides family CIDE-N PF02017.15 ORF123066 - 0.097 12.7 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 CIDE-N domain FHA PF00498.26 ORF122975 - 8.3e-12 45.3 0.1 9.4e-12 45.1 0.1 1.1 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF122975 - 0.00013 22.2 0.0 0.00014 22.1 0.0 1.0 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain AAA_lid_8 PF17868.1 ORF122790 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain Peptidase_C12 PF01088.21 ORF122377 - 1.1e-10 41.6 0.0 1.3e-10 41.4 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 NHL PF01436.21 ORF121947 - 0.029 14.4 0.1 0.14 12.3 0.0 1.9 2 0 0 2 2 2 0 NHL repeat Reg_prop PF07494.11 ORF121947 - 0.03 14.5 0.0 0.08 13.2 0.0 1.7 1 0 0 1 1 1 0 Two component regulator propeller DUF1889 PF08986.10 ORF121880 - 0.1 13.0 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1889) DUF4921 PF16268.5 ORF12165 - 0.092 11.5 0.2 0.094 11.5 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4921) zf-C2H2_6 PF13912.6 ORF121083 - 0.1 12.7 0.3 0.18 11.8 0.3 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger DUF2797 PF10977.8 ORF121083 - 0.12 12.3 1.3 0.12 12.2 1.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) DUF1430 PF07242.11 ORF120891 - 0.0089 16.3 0.0 0.016 15.5 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1430) Paramyx_P_V_C PF03210.13 ORF12087 - 0.29 10.9 4.6 0.35 10.6 4.6 1.1 1 0 0 1 1 1 0 Paramyxovirus P/V phosphoprotein C-terminal RseC_MucC PF04246.12 ORF120821 - 1.9 8.4 5.8 2.6 8.0 5.8 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC COMPASS-Shg1 PF05205.12 ORF120409 - 0.0075 17.0 0.2 0.0076 16.9 0.2 1.0 1 0 0 1 1 1 1 COMPASS (Complex proteins associated with Set1p) component shg1 HTH_48 PF17906.1 ORF120409 - 0.13 12.4 0.1 0.17 12.0 0.1 1.2 1 0 0 1 1 1 0 HTH domain in Mos1 transposase DUF4791 PF16039.5 ORF120391 - 0.059 12.9 0.2 0.07 12.7 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4791) Effector_1 PF04518.12 ORF120373 - 0.0079 15.3 0.9 0.0089 15.2 0.9 1.0 1 0 0 1 1 1 1 Effector from type III secretion system Gal4_dimer PF03902.13 ORF120373 - 0.023 14.9 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 Gal4-like dimerisation domain HHA PF05321.11 ORF120373 - 0.034 14.5 0.1 0.043 14.1 0.1 1.2 1 0 0 1 1 1 0 Haemolysin expression modulating protein IL13 PF03487.13 ORF120373 - 0.071 12.9 0.5 0.087 12.6 0.5 1.1 1 0 0 1 1 1 0 Interleukin-13 DUF3966 PF13110.6 ORF120163 - 0.076 12.9 1.5 0.11 12.4 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3966) Dehyd-heme_bind PF09098.10 ORF119962 - 0.017 14.8 0.5 0.022 14.4 0.5 1.2 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding COMPASS-Shg1 PF05205.12 ORF119944 - 0.012 16.4 0.1 0.012 16.3 0.1 1.0 1 0 0 1 1 1 0 COMPASS (Complex proteins associated with Set1p) component shg1 Zn_Tnp_IS91 PF14319.6 ORF119900 - 0.019 15.0 3.0 0.028 14.5 3.0 1.3 1 0 0 1 1 1 0 Transposase zinc-binding domain MbtH PF03621.13 ORF118977 - 0.22 11.0 2.0 0.55 9.7 2.0 1.7 1 1 0 1 1 1 0 MbtH-like protein AP4E_app_platf PF14807.6 ORF118777 - 0.0043 17.4 0.0 0.0047 17.3 0.0 1.0 1 0 0 1 1 1 1 Adaptin AP4 complex epsilon appendage platform FDX-ACB PF03147.14 ORF118777 - 0.046 14.1 0.1 0.047 14.1 0.1 1.2 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain LHH PF14411.6 ORF118586 - 0.12 12.6 0.2 0.12 12.6 0.2 1.5 2 0 0 2 2 2 0 A nuclease of the HNH/ENDO VII superfamily with conserved LHH Doppel PF11466.8 ORF117727 - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel COMPASS-Shg1 PF05205.12 ORF117663 - 0.0075 17.0 0.2 0.0076 16.9 0.2 1.0 1 0 0 1 1 1 1 COMPASS (Complex proteins associated with Set1p) component shg1 HTH_48 PF17906.1 ORF117663 - 0.13 12.4 0.1 0.17 12.0 0.1 1.2 1 0 0 1 1 1 0 HTH domain in Mos1 transposase VP_N-CPKC PF11475.8 ORF11710 - 0.3 11.0 7.3 0.56 10.2 0.2 3.1 2 1 1 3 3 3 0 Virion protein N terminal domain MORN PF02493.20 ORF116836 - 6.4e-19 66.6 24.5 3.1e-10 39.3 1.9 4.0 4 0 0 4 4 4 3 MORN repeat DUF1317 PF07026.11 ORF116811 - 0.082 12.7 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1317) GP3 PF03076.14 ORF115739 - 0.092 12.8 10.4 0.1 12.7 10.4 1.0 1 0 0 1 1 1 0 Equine arteritis virus GP3 DUF5540 PF17694.1 ORF115650 - 0.21 12.1 1.8 0.26 11.8 1.8 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5540) IL7 PF01415.16 ORF115408 - 0.0082 16.2 1.3 0.0083 16.2 1.3 1.1 1 0 0 1 1 1 1 Interleukin 7/9 family Cadherin_C_2 PF16492.5 ORF115097 - 0.033 14.9 0.1 0.038 14.7 0.1 1.1 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal WBP-1 PF11669.8 ORF115097 - 0.067 13.8 0.5 0.084 13.5 0.5 1.2 1 0 0 1 1 1 0 WW domain-binding protein 1 SIT PF15330.6 ORF115097 - 0.15 12.5 0.1 0.16 12.4 0.1 1.2 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT RNA_pol_L_2 PF13656.6 ORF115065 - 0.002 17.9 0.1 0.003 17.3 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Coilin_N PF15862.5 ORF115065 - 0.036 13.9 3.5 0.037 13.8 3.5 1.0 1 0 0 1 1 1 0 Coilin N-terminus DUF751 PF05421.11 ORF11502 - 0.0067 17.1 0.1 0.0084 16.8 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF751) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks415.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks415.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks415.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks415.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- QSregVF PF13652.6 ORF114793 - 0.025 14.6 0.2 0.027 14.5 0.2 1.1 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor Oleosin PF01277.17 ORF114527 - 0.052 13.3 5.1 0.056 13.2 5.1 1.1 1 0 0 1 1 1 0 Oleosin Proton_antipo_N PF00662.20 ORF114457 - 0.04 14.0 0.8 0.046 13.8 0.8 1.2 1 0 0 1 1 1 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DbpA PF03880.15 ORF114361 - 0.018 15.0 0.2 0.025 14.6 0.2 1.3 1 1 0 1 1 1 0 DbpA RNA binding domain La PF05383.17 ORF114361 - 0.04 14.0 0.1 0.051 13.6 0.1 1.5 1 1 0 1 1 1 0 La domain TGF_beta PF00019.20 ORF113415 - 0.013 16.4 0.2 0.014 16.4 0.2 1.1 1 0 0 1 1 1 0 Transforming growth factor beta like domain ABC2_membrane_3 PF12698.7 ORF113256 - 6.7 5.7 6.8 7.2 5.6 6.8 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Babuvirus_MP PF07234.11 ORF113255 - 1.2 9.3 5.1 1.3 9.2 5.1 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein Ldh_1_N PF00056.23 ORF11287 - 0.1 12.7 0.2 0.11 12.5 0.2 1.2 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain DUF4186 PF13811.6 ORF111975 - 0.48 10.5 4.2 0.51 10.4 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) DUF4397 PF14344.6 ORF111399 - 0.037 14.8 0.0 0.042 14.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4397) DUF5463 PF17551.2 ORF111396 - 0.14 12.1 0.1 0.14 12.1 0.1 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5463) DUF1631 PF07793.11 ORF110656 - 0.046 12.1 0.5 0.051 12.0 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) Fer4_14 PF13394.6 ORF110529 - 0.051 13.7 0.3 0.057 13.6 0.3 1.1 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF2682 PF10909.8 ORF110529 - 0.052 14.0 1.4 0.061 13.8 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2682) Peptidase_M3_N PF08439.10 ORF110385 - 0.036 14.3 0.2 0.054 13.8 0.1 1.5 1 1 0 1 1 1 0 Oligopeptidase F DUF2303 PF10065.9 ORF110385 - 0.038 13.1 0.1 0.04 13.1 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) SyrA PF11089.8 ORF109257 - 0.02 14.9 1.8 0.62 10.2 0.0 2.1 1 1 1 2 2 2 0 Exopolysaccharide production repressor DUF2254 PF10011.9 ORF109013 - 4.6 6.0 7.4 4.6 6.0 7.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF2806 PF10987.8 ORF108077 - 0.003 17.5 0.2 0.0033 17.3 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2806) DUF1937 PF09152.10 ORF107897 - 0.069 14.0 0.0 0.074 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1937) TAXi_N PF14543.6 ORF107765 - 0.081 13.1 0.1 0.082 13.1 0.1 1.1 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal DUF963 PF06131.11 ORF107657 - 0.13 11.7 2.9 2.2 7.8 0.6 2.1 2 0 0 2 2 2 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) AAA_lid_8 PF17868.1 ORF107541 - 0.019 14.8 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain Pkinase_Tyr PF07714.17 ORF107344 - 0.0035 16.6 0.0 0.0035 16.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3480 PF11979.8 ORF107330 - 0.094 11.7 0.1 0.096 11.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3480) PRRSV_Env PF02340.15 ORF106926 - 0.37 10.1 2.8 0.43 9.9 2.8 1.0 1 0 0 1 1 1 0 PRRSV putative envelope protein DUF3283 PF11686.8 ORF106614 - 0.083 12.8 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3283) NCD1 PF04904.13 ORF106291 - 0.063 13.3 0.3 1.2 9.2 0.0 2.3 1 1 1 2 2 2 0 NAB conserved region 1 (NCD1) Prenyltrans PF00432.21 ORF106291 - 0.13 12.0 1.4 0.66 9.8 0.1 2.1 2 0 0 2 2 2 0 Prenyltransferase and squalene oxidase repeat Toxin_14 PF07829.11 ORF105949 - 0.049 13.6 3.0 0.11 12.4 3.0 1.6 1 0 0 1 1 1 0 Alpha-A conotoxin PIVA-like protein PuR_N PF09182.10 ORF105135 - 0.053 13.5 0.1 0.066 13.1 0.1 1.3 1 1 0 1 1 1 0 Bacterial purine repressor, N-terminal AvrB_AvrC PF05394.11 ORF105135 - 0.064 12.5 0.2 0.065 12.4 0.2 1.0 1 0 0 1 1 1 0 Avirulence protein zf-Paramyx-P PF13008.7 ORF104978 - 0.81 9.2 6.7 0.2 11.2 2.5 2.0 1 1 1 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein OAD_gamma PF04277.13 ORF104385 - 0.029 14.9 0.1 0.039 14.5 0.1 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF4181 PF13789.6 ORF104385 - 0.038 14.2 2.0 0.042 14.1 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) K1 PF02960.14 ORF104382 - 0.12 12.5 0.8 0.13 12.4 0.8 1.1 1 0 0 1 1 1 0 K1 glycoprotein DUF499 PF04465.12 ORF104341 - 0.084 10.6 0.1 0.08 10.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF499) DUF2809 PF10990.8 ORF104341 - 0.096 13.4 0.7 0.11 13.2 0.3 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2809) Neocarzinostat PF00960.18 ORF104320 - 0.0043 17.0 0.1 0.0046 16.9 0.1 1.1 1 0 0 1 1 1 1 Neocarzinostatin family TTL PF03133.15 ORF104167 - 1.1e-15 57.6 0.0 1.1e-15 57.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF104167 - 2.3e-06 27.1 0.0 2.6e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF104167 - 0.002 17.4 0.0 0.002 17.4 0.0 1.1 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF104167 - 0.17 11.4 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus Wzz PF02706.15 ORF103217 - 0.17 12.2 2.6 0.19 12.0 2.6 1.2 1 0 0 1 1 1 0 Chain length determinant protein MCRS_N PF13325.6 ORF1029 - 0.19 11.7 0.0 0.21 11.6 0.0 1.0 1 0 0 1 1 1 0 N-terminal region of micro-spherule protein Fer4_14 PF13394.6 ORF102603 - 0.051 13.7 0.3 0.057 13.6 0.3 1.1 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF2682 PF10909.8 ORF102603 - 0.052 14.0 1.4 0.061 13.8 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2682) DUF3043 PF11241.8 ORF102385 - 8.1 6.4 6.2 8.7 6.3 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF4497 PF14924.6 ORF102139 - 0.05 14.1 0.1 0.078 13.5 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4497) PDEase_I_N PF08499.12 ORF101464 - 0.0055 16.5 0.0 0.0079 16.0 0.0 1.2 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase N-terminal EndIII_4Fe-2S PF10576.9 ORF101323 - 0.0059 16.9 2.7 0.0059 16.9 2.7 2.6 2 0 0 2 2 2 2 Iron-sulfur binding domain of endonuclease III DUF3157 PF11355.8 ORF101267 - 0.0088 15.7 0.2 0.0088 15.7 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3157) Flagellar_put PF12611.8 ORF100710 - 0.17 11.7 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Putative flagellar CSD PF00313.22 ORF100708 - 2.3e-33 113.8 0.3 2.5e-33 113.7 0.3 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF100708 - 3.2e-05 23.5 0.2 5.1e-05 22.9 0.2 1.3 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF3813 PF12758.7 ORF100646 - 0.0047 17.2 0.8 0.0061 16.9 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3813) YfcL PF08891.11 ORF100646 - 0.043 14.2 0.3 0.1 12.9 0.3 1.6 1 1 0 1 1 1 0 YfcL protein Tctex-1 PF03645.13 ORF100646 - 0.097 12.9 0.4 0.12 12.7 0.4 1.1 1 0 0 1 1 1 0 Tctex-1 family YqzH PF14164.6 ORF100646 - 0.12 12.4 0.7 0.15 12.2 0.7 1.1 1 0 0 1 1 1 0 YqzH-like protein DUF1455 PF07306.11 NODE_82427_length_193_cov_0.873418_g74486_i0reverse_frame_1 - 0.002 18.1 0.0 0.0022 17.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1455) DUF4027 PF13219.6 NODE_82427_length_193_cov_0.873418_g74486_i0reverse_frame_1 - 0.22 11.4 1.2 0.32 10.9 1.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4027) H2TH PF06831.14 NODE_82420_length_193_cov_0.974684_g74479_i0forward_frame_1 - 0.055 13.5 0.0 0.063 13.3 0.0 1.1 1 0 0 1 1 1 0 Formamidopyrimidine-DNA glycosylase H2TH domain DUF1157 PF06636.11 NODE_82420_length_193_cov_0.974684_g74479_i0forward_frame_1 - 0.084 11.7 0.0 0.099 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1157) DUF4648 PF15505.6 NODE_82416_length_193_cov_0.993671_g74475_i0forward_frame_1 - 0.042 14.7 0.0 0.053 14.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4648) Ank_4 PF13637.6 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_1 - 0.00077 20.0 0.0 0.00094 19.7 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_1 - 0.00087 19.8 0.0 0.0011 19.6 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_1 - 0.02 15.4 0.2 0.51 10.9 0.1 2.1 2 0 0 2 2 2 0 Ankyrin repeat Ank_5 PF13857.6 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_1 - 0.059 13.7 0.0 0.079 13.3 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeats (many copies) PCSK9_C1 PF18459.1 NODE_82409_length_193_cov_1.000000_g74468_i0reverse_frame_1 - 0.17 12.0 0.4 0.29 11.3 0.2 1.5 1 1 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain GlyL_C PF12524.8 NODE_82406_length_193_cov_1.000000_g74465_i0forward_frame_1 - 0.0073 16.4 0.6 0.012 15.8 0.6 1.5 1 1 0 1 1 1 1 dsDNA virus glycoprotein L C terminal DUF4349 PF14257.6 NODE_82403_length_193_cov_1.006329_g74462_i0reverse_frame_1 - 0.077 12.4 2.4 0.07 12.6 2.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Shisa PF13908.6 NODE_82403_length_193_cov_1.006329_g74462_i0reverse_frame_1 - 0.64 10.2 4.1 0.57 10.4 4.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator UPF0258 PF06789.12 NODE_82403_length_193_cov_1.006329_g74462_i0reverse_frame_1 - 8 6.6 8.2 9.5 6.3 8.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0258) Pex24p PF06398.11 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_1 - 4.9 6.0 7.6 5 6.0 7.6 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF2101 PF09874.9 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_1 - 5.8 6.6 7.0 5.7 6.6 7.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Ac81 PF05820.11 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_1 - 8 6.0 9.1 8.5 5.9 9.1 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 DUF2028 PF09667.10 NODE_82396_length_193_cov_1.006329_g74455_i0reverse_frame_1 - 0.053 13.5 1.0 0.053 13.5 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2028) NYAP_C PF15452.6 NODE_82390_length_193_cov_1.012658_g74449_i0reverse_frame_1 - 0.0026 17.7 1.1 0.0031 17.4 1.1 1.1 1 0 0 1 1 1 1 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter SNAD2 PF18745.1 NODE_82386_length_193_cov_1.012658_g74445_i0reverse_frame_1 - 0.026 14.2 0.2 0.026 14.2 0.2 1.1 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 2 Apq12 PF12716.7 NODE_82384_length_193_cov_1.012658_g74443_i0reverse_frame_1 - 0.23 11.4 4.7 0.39 10.7 4.6 1.5 1 1 0 1 1 1 0 Nuclear pore assembly and biogenesis PH_18 PF18469.1 NODE_82374_length_193_cov_1.012658_g74433_i0reverse_frame_1 - 0.003 17.6 0.3 0.003 17.6 0.3 1.1 1 0 0 1 1 1 1 Pleckstrin homology domain Shisa PF13908.6 NODE_82372_length_193_cov_1.012658_g74431_i0forward_frame_1 - 0.028 14.7 0.5 0.028 14.7 0.5 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DYW_deaminase PF14432.6 NODE_82372_length_193_cov_1.012658_g74431_i0forward_frame_1 - 0.069 13.0 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 DYW family of nucleic acid deaminases Keratin_matx PF04579.12 NODE_82371_length_193_cov_1.012658_g74430_i0reverse_frame_1 - 0.0089 16.3 0.9 0.02 15.2 0.9 1.6 1 1 1 2 2 2 1 Keratin, high-sulphur matrix protein UbiA PF01040.18 NODE_82369_length_193_cov_1.012658_g74428_i0reverse_frame_1 - 7e-09 35.3 0.7 7.6e-09 35.2 0.7 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family HPP PF04982.13 NODE_82369_length_193_cov_1.012658_g74428_i0reverse_frame_1 - 0.046 13.9 0.8 0.073 13.2 0.4 1.5 1 1 1 2 2 2 0 HPP family FeoB_C PF07664.12 NODE_82369_length_193_cov_1.012658_g74428_i0reverse_frame_1 - 0.14 11.9 1.6 0.24 11.1 0.1 1.8 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus DUF2284 PF10050.9 NODE_82368_length_193_cov_1.012658_g74427_i0reverse_frame_1 - 0.045 13.5 3.3 0.051 13.3 3.3 1.0 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) DUF4018 PF13210.6 NODE_82367_length_193_cov_1.012658_g74426_i0forward_frame_1 - 0.018 14.9 3.5 0.019 14.7 3.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) DUF3927 PF13064.6 NODE_82359_length_193_cov_1.012658_g74418_i0reverse_frame_1 - 3.3 7.7 7.5 0.78 9.8 0.5 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF3927) zf-C6H2 PF15801.5 NODE_82358_length_193_cov_1.012658_g74417_i0reverse_frame_1 - 0.015 15.6 2.9 0.02 15.2 2.9 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding DUF5009 PF16401.5 NODE_82358_length_193_cov_1.012658_g74417_i0reverse_frame_1 - 0.044 13.3 0.6 0.045 13.2 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) DUF3699 PF12480.8 NODE_82354_length_193_cov_1.050633_g74413_i0reverse_frame_1 - 0.1 12.8 0.2 0.5 10.6 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3699) SR-25 PF10500.9 NODE_82349_length_193_cov_1.075949_g74408_i0forward_frame_1 - 0.18 11.4 11.0 0.2 11.2 11.0 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein MCCD1 PF15707.5 NODE_82349_length_193_cov_1.075949_g74408_i0forward_frame_1 - 0.63 10.5 3.9 0.8 10.2 3.9 1.2 1 0 0 1 1 1 0 Mitochondrial coiled-coil domain protein 1 DUF2921 PF11145.8 NODE_82337_length_193_cov_1.177215_g74396_i0reverse_frame_1 - 0.21 9.4 0.0 0.21 9.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2921) AMP_N PF05195.16 NODE_82322_length_193_cov_1.215190_g74381_i0forward_frame_1 - 0.13 12.0 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Aminopeptidase P, N-terminal domain Hanta_G2 PF01561.16 NODE_82319_length_193_cov_1.221519_g74378_i0reverse_frame_1 - 0.035 12.8 0.0 0.035 12.8 0.0 1.0 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 SNN_linker PF09050.10 NODE_82318_length_193_cov_1.227848_g74377_i0reverse_frame_1 - 0.24 11.2 0.9 0.38 10.6 0.9 1.3 1 0 0 1 1 1 0 Stannin unstructured linker Phage_holin_2_1 PF04971.12 NODE_82313_length_193_cov_1.259494_g74372_i0forward_frame_1 - 0.023 14.7 0.0 0.037 14.0 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage P21 holin S Beta-TrCP_D PF12125.8 NODE_82290_length_193_cov_1.316456_g74349_i0reverse_frame_1 - 0.4 10.6 2.3 0.66 9.9 1.8 1.9 1 1 0 1 1 1 0 D domain of beta-TrCP IQ PF00612.27 NODE_82290_length_193_cov_1.316456_g74349_i0forward_frame_1 - 5.9e-06 25.6 0.0 1.2e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 IQ calmodulin-binding motif TAF8_C PF10406.9 NODE_82289_length_193_cov_1.322785_g74348_i0forward_frame_1 - 0.046 14.3 0.4 0.058 14.0 0.4 1.2 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term DUF5637 PF18687.1 NODE_82286_length_193_cov_1.341772_g74345_i0reverse_frame_1 - 1 9.4 12.8 0.94 9.5 2.9 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5637) zf-C3HC4_2 PF13923.6 NODE_82281_length_193_cov_1.373418_g74340_i0forward_frame_1 - 0.012 15.4 5.1 0.022 14.6 5.1 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Ank_2 PF12796.7 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_1 - 0.0022 18.5 0.0 0.0025 18.3 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_1 - 0.0073 16.6 0.0 0.014 15.7 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_1 - 0.016 15.7 0.0 0.037 14.6 0.1 1.6 2 0 0 2 2 2 0 Ankyrin repeat Ank PF00023.30 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_1 - 0.025 15.0 0.1 0.04 14.4 0.1 1.4 1 0 0 1 1 1 0 Ankyrin repeat Ank_4 PF13637.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_1 - 0.18 12.4 0.0 0.25 12.0 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) NinE PF05322.11 NODE_82271_length_193_cov_1.405063_g74330_i0reverse_frame_1 - 0.85 9.6 7.4 1.7 8.6 0.4 2.1 1 1 1 2 2 2 0 NINE Protein Luteo_P1-P2 PF08467.10 NODE_82271_length_193_cov_1.405063_g74330_i0forward_frame_1 - 0.1 11.8 0.6 0.12 11.6 0.6 1.2 1 0 0 1 1 1 0 Luteovirus RNA polymerase P1-P2/replicase DUF1036 PF06282.11 NODE_82259_length_193_cov_1.474684_g74318_i0reverse_frame_1 - 0.057 14.0 0.0 0.057 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1036) Capsid_VP7 PF17071.5 NODE_82258_length_193_cov_1.487342_g74317_i0reverse_frame_1 - 0.21 10.8 0.0 0.26 10.6 0.0 1.0 1 0 0 1 1 1 0 Outer capsid protein VP7 DUF5450 PF17529.2 NODE_82257_length_193_cov_1.487342_g74316_i0forward_frame_1 - 4.1 7.5 7.5 3.8 7.6 7.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5450) bZIP_2 PF07716.15 NODE_82256_length_193_cov_1.493671_g74315_i0forward_frame_1 - 0.00082 19.4 1.7 0.29 11.3 0.1 2.1 2 0 0 2 2 2 2 Basic region leucine zipper DUF5082 PF16888.5 NODE_82256_length_193_cov_1.493671_g74315_i0forward_frame_1 - 0.001 19.3 3.2 0.36 11.1 0.3 1.9 1 1 1 2 2 2 2 Domain of unknown function (DUF5082) DivIC PF04977.15 NODE_82256_length_193_cov_1.493671_g74315_i0forward_frame_1 - 0.013 15.3 1.9 0.037 13.8 0.3 1.9 1 1 1 2 2 2 0 Septum formation initiator DUF3262 PF11660.8 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_1 - 0.2 12.0 3.9 0.26 11.7 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3262) ALG3 PF05208.13 NODE_82235_length_193_cov_1.518987_g74294_i0forward_frame_1 - 8.4e-05 22.2 3.0 8.5e-05 22.1 3.0 1.0 1 0 0 1 1 1 1 ALG3 protein HTH_Tnp_IS630 PF01710.16 NODE_82235_length_193_cov_1.518987_g74294_i0forward_frame_1 - 0.061 13.4 0.0 0.071 13.2 0.0 1.1 1 0 0 1 1 1 0 Transposase DUF5009 PF16401.5 NODE_82233_length_193_cov_1.518987_g74292_i0forward_frame_1 - 0.094 12.2 1.5 0.098 12.1 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5009) THEG PF14912.6 NODE_82224_length_193_cov_1.518987_g74283_i0forward_frame_1 - 0.029 14.8 0.0 0.034 14.6 0.0 1.2 1 0 0 1 1 1 0 Testicular haploid expressed repeat DUF5074 PF16819.5 NODE_82222_length_193_cov_1.518987_g74281_i0reverse_frame_1 - 0.029 14.4 0.0 0.029 14.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5074) DUF1556 PF07590.11 NODE_82218_length_193_cov_1.518987_g74277_i0reverse_frame_1 - 0.13 12.6 1.5 0.15 12.4 1.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1556) DUF2767 PF10965.8 NODE_82217_length_193_cov_1.531646_g74276_i0forward_frame_1 - 0.069 13.1 2.5 0.084 12.9 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2767) Cas_Csy4 PF09618.10 NODE_82210_length_193_cov_1.588608_g74269_i0forward_frame_1 - 0.069 13.3 0.1 0.073 13.2 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) NS3_envE PF02723.14 NODE_82206_length_193_cov_1.613924_g74265_i0reverse_frame_1 - 1.8 8.7 9.5 1.4 9.0 4.0 2.0 1 1 1 2 2 2 0 Non-structural protein NS3/Small envelope protein E CLP1_P PF16575.5 NODE_82202_length_193_cov_1.620253_g74261_i0reverse_frame_1 - 0.12 12.2 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop LNP1 PF15419.6 NODE_82202_length_193_cov_1.620253_g74261_i0forward_frame_1 - 0.098 12.9 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Leukemia NUP98 fusion partner 1 DUF2490 PF10677.9 NODE_82200_length_193_cov_1.626582_g74259_i0reverse_frame_1 - 0.015 15.2 0.8 0.018 15.0 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2490) LEA_2 PF03168.13 NODE_82200_length_193_cov_1.626582_g74259_i0reverse_frame_1 - 0.068 13.7 1.0 0.32 11.6 1.0 2.0 1 1 0 1 1 1 0 Late embryogenesis abundant protein DUF1943 PF09172.11 NODE_82200_length_193_cov_1.626582_g74259_i0reverse_frame_1 - 0.094 11.9 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) TFA2_Winged_2 PF18121.1 NODE_82197_length_193_cov_1.651899_g74256_i0reverse_frame_1 - 0.011 15.4 0.3 0.015 15.0 0.3 1.2 1 0 0 1 1 1 0 TFA2 Winged helix domain 2 Med9 PF07544.13 NODE_82197_length_193_cov_1.651899_g74256_i0reverse_frame_1 - 0.026 14.6 0.7 0.033 14.3 0.7 1.1 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 DASH_Dam1 PF08653.10 NODE_82197_length_193_cov_1.651899_g74256_i0reverse_frame_1 - 0.058 13.2 0.3 7.7 6.4 0.1 2.1 2 0 0 2 2 2 0 DASH complex subunit Dam1 GARP PF16731.5 NODE_82197_length_193_cov_1.651899_g74256_i0reverse_frame_1 - 0.074 12.7 0.1 0.08 12.6 0.1 1.0 1 0 0 1 1 1 0 Glutamic acid/alanine-rich protein of Trypanosoma DUF5480 PF17576.2 NODE_82192_length_193_cov_1.696203_g74251_i0forward_frame_1 - 0.0095 15.9 0.4 0.012 15.6 0.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5480) Peptidase_A3 PF02160.15 NODE_82186_length_193_cov_1.740506_g74245_i0reverse_frame_1 - 0.0053 16.3 0.2 0.0059 16.1 0.2 1.1 1 0 0 1 1 1 1 Cauliflower mosaic virus peptidase (A3) DUF4644 PF15486.6 NODE_82185_length_193_cov_1.746835_g74244_i0reverse_frame_1 - 0.051 13.3 0.6 0.055 13.2 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4644) HOK_GEF PF01848.16 NODE_82184_length_193_cov_1.753165_g74243_i0forward_frame_1 - 0.053 12.9 0.7 0.08 12.4 0.7 1.3 1 0 0 1 1 1 0 Hok/gef family DUF4620 PF15399.6 NODE_82183_length_193_cov_1.753165_g74242_i0forward_frame_1 - 0.88 9.9 3.0 1.1 9.7 3.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4620) RVT_1 PF00078.27 NODE_82178_length_193_cov_1.772152_g74237_i0forward_frame_1 - 0.0036 16.9 0.0 0.0038 16.8 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Pyridoxal_deC PF00282.19 NODE_82175_length_193_cov_1.778481_g74234_i0forward_frame_1 - 2.7e-06 26.3 0.0 2.9e-06 26.3 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain DUF746 PF05344.11 NODE_82174_length_193_cov_1.778481_g74233_i0reverse_frame_1 - 0.14 12.1 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) DUF1660 PF07874.11 NODE_82172_length_193_cov_1.791139_g74231_i0forward_frame_1 - 0.067 13.7 0.5 0.082 13.4 0.5 1.1 1 0 0 1 1 1 0 Prophage protein (DUF1660) Toxin_21 PF08091.11 NODE_82166_length_193_cov_1.873418_g74225_i0forward_frame_1 - 0.00095 19.0 1.5 0.00095 19.0 1.5 1.8 2 0 0 2 2 2 1 Spider insecticidal peptide Imm43 PF15570.6 NODE_82162_length_193_cov_1.924051_g74221_i0reverse_frame_1 - 0.016 15.3 1.6 0.019 15.0 1.6 1.1 1 0 0 1 1 1 0 Immunity protein 43 AA_permease_C PF13906.6 NODE_82160_length_193_cov_1.943038_g74219_i0reverse_frame_1 - 1.8 8.7 13.3 7.8 6.7 13.0 2.0 1 1 1 2 2 2 0 C-terminus of AA_permease Chitin_synth_2 PF03142.15 NODE_82156_length_193_cov_1.993671_g74215_i0reverse_frame_1 - 3.5e-05 22.6 0.0 3.5e-05 22.6 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 NODE_82156_length_193_cov_1.993671_g74215_i0reverse_frame_1 - 0.00077 19.4 0.0 0.00078 19.4 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 NODE_82156_length_193_cov_1.993671_g74215_i0reverse_frame_1 - 0.0047 16.8 0.0 0.0055 16.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 DnaJ PF00226.31 NODE_82154_length_193_cov_2.000000_g74213_i0forward_frame_1 - 5.5e-10 39.2 0.4 6.4e-10 39.0 0.4 1.1 1 0 0 1 1 1 1 DnaJ domain FSH1 PF03959.13 NODE_82152_length_193_cov_2.006329_g74211_i0forward_frame_1 - 0.0051 16.5 0.0 0.0051 16.5 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) SapA PF02199.15 NODE_82141_length_193_cov_2.025316_g74200_i0forward_frame_1 - 0.072 13.4 0.3 0.072 13.4 0.3 2.0 2 1 0 2 2 2 0 Saposin A-type domain THAP PF05485.12 NODE_82138_length_193_cov_2.063291_g74197_i0forward_frame_1 - 0.038 14.9 0.2 0.045 14.7 0.2 1.1 1 0 0 1 1 1 0 THAP domain PHZA_PHZB PF03284.13 NODE_82136_length_193_cov_2.063291_g74195_i0reverse_frame_1 - 0.082 12.5 0.2 0.082 12.5 0.2 1.1 1 0 0 1 1 1 0 Phenazine biosynthesis protein A/B RdgC PF04381.12 NODE_82131_length_193_cov_2.113924_g74190_i0forward_frame_1 - 8.3e-22 77.8 0.5 9.5e-22 77.6 0.5 1.0 1 0 0 1 1 1 1 Putative exonuclease, RdgC NDUF_B8 PF05821.11 NODE_82129_length_193_cov_2.139241_g74188_i0forward_frame_1 - 0.1 12.4 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) RCC1 PF00415.18 NODE_82123_length_193_cov_2.259494_g74182_i0forward_frame_1 - 1.3e-06 28.9 0.0 1.7e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_82123_length_193_cov_2.259494_g74182_i0forward_frame_1 - 0.11 12.3 0.8 1.2 9.1 0.1 2.6 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat SMG1 PF15785.5 NODE_82119_length_193_cov_2.329114_g74178_i0reverse_frame_1 - 0.92 7.8 3.0 1 7.7 3.0 1.0 1 0 0 1 1 1 0 Serine/threonine-protein kinase smg-1 Jiv90 PF14901.6 NODE_82113_length_193_cov_2.360759_g74172_i0reverse_frame_1 - 0.026 14.6 0.2 0.03 14.5 0.2 1.2 1 0 0 1 1 1 0 Cleavage inducing molecular chaperone Ribosomal_L32p PF01783.23 NODE_82110_length_193_cov_2.386076_g74169_i0reverse_frame_1 - 0.03 14.6 0.2 0.047 13.9 0.2 1.4 1 0 0 1 1 1 0 Ribosomal L32p protein family MBOAT PF03062.19 NODE_82108_length_193_cov_2.417722_g74167_i0reverse_frame_1 - 3.4e-17 62.8 2.4 3.7e-17 62.7 2.4 1.0 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family MBOAT_2 PF13813.6 NODE_82108_length_193_cov_2.417722_g74167_i0reverse_frame_1 - 8.7e-06 25.9 2.0 9.4e-06 25.8 2.0 1.0 1 0 0 1 1 1 1 Membrane bound O-acyl transferase family COX6C PF02937.15 NODE_82100_length_193_cov_2.518987_g74159_i0forward_frame_1 - 0.038 14.1 0.3 0.047 13.8 0.3 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc PXT1 PF15214.6 NODE_82100_length_193_cov_2.518987_g74159_i0forward_frame_1 - 0.069 13.5 0.1 0.11 12.9 0.1 1.4 1 0 0 1 1 1 0 Peroxisomal testis-specific protein 1 DpnI PF06044.12 NODE_82095_length_193_cov_2.607595_g74154_i0reverse_frame_1 - 0.21 11.2 0.0 0.24 11.0 0.0 1.0 1 0 0 1 1 1 0 Dam-replacing family LCE6A PF15858.5 NODE_82095_length_193_cov_2.607595_g74154_i0forward_frame_1 - 0.091 13.5 0.7 0.12 13.2 0.3 1.4 1 1 0 1 1 1 0 Late cornified envelope protein 6A family SR-25 PF10500.9 NODE_82089_length_193_cov_2.689873_g74148_i0reverse_frame_1 - 0.03 14.0 9.4 0.034 13.8 9.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_82089_length_193_cov_2.689873_g74148_i0reverse_frame_1 - 0.054 14.2 3.1 0.058 14.1 3.1 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF755 PF05501.11 NODE_82089_length_193_cov_2.689873_g74148_i0reverse_frame_1 - 0.084 13.1 16.4 0.1 12.9 16.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF755) DUF4636 PF15468.6 NODE_82087_length_193_cov_2.734177_g74146_i0reverse_frame_1 - 0.39 10.4 3.4 0.42 10.3 3.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) Cytochrom_NNT PF03264.14 NODE_82086_length_193_cov_2.772152_g74145_i0reverse_frame_1 - 9.6e-06 25.4 0.2 1.5e-05 24.7 0.2 1.3 1 0 0 1 1 1 1 NapC/NirT cytochrome c family, N-terminal region DUF3915 PF13054.6 NODE_82084_length_193_cov_2.778481_g74143_i0forward_frame_1 - 0.056 13.4 1.4 0.059 13.3 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) DUF1326 PF07040.11 NODE_82083_length_193_cov_2.822785_g74142_i0forward_frame_1 - 0.22 11.5 2.5 0.27 11.2 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1326) DHHW PF14286.6 NODE_82078_length_193_cov_2.993671_g74137_i0forward_frame_1 - 0.05 12.9 0.0 0.054 12.8 0.0 1.0 1 0 0 1 1 1 0 DHHW protein ICAM_N PF03921.14 NODE_82077_length_193_cov_3.018987_g74136_i0reverse_frame_1 - 0.038 13.7 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain HlyD_D23 PF16576.5 NODE_82071_length_193_cov_3.221519_g74130_i0reverse_frame_1 - 0.16 11.1 0.0 0.19 10.9 0.0 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion DUF5316 PF17247.2 NODE_82068_length_193_cov_3.253165_g74127_i0forward_frame_1 - 0.18 11.9 0.1 0.72 9.9 0.0 1.7 1 1 1 2 2 2 0 Family of unknown function (DUF5316) 6PGD PF00393.19 NODE_82062_length_193_cov_4.000000_g74121_i0forward_frame_1 - 1.2e-17 64.3 0.0 1.3e-17 64.2 0.0 1.0 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain Asp5 PF17000.5 NODE_82060_length_193_cov_4.044304_g74119_i0reverse_frame_1 - 0.033 14.3 0.0 0.034 14.3 0.0 1.1 1 0 0 1 1 1 0 Accessory secretory protein Sec, Asp5 CDC48_2 PF02933.17 NODE_82052_length_193_cov_15.848101_g74111_i0forward_frame_1 - 0.14 12.0 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 TMCO5 PF14992.6 NODE_82052_length_193_cov_15.848101_g74111_i0forward_frame_1 - 5.4 6.5 6.0 6 6.4 6.0 1.1 1 0 0 1 1 1 0 TMCO5 family ATP-synt_8 PF00895.20 NODE_82050_length_193_cov_22.569620_g74109_i0forward_frame_1 - 0.31 11.5 2.3 0.45 11.0 2.3 1.4 1 0 0 1 1 1 0 ATP synthase protein 8 DUF5320 PF17253.2 NODE_82044_length_193_cov_28.037975_g74103_i0reverse_frame_1 - 0.077 14.1 0.2 0.097 13.7 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5320) ChaB PF06150.12 NODE_82042_length_193_cov_28.721519_g74101_i0reverse_frame_1 - 0.14 12.8 2.5 0.18 12.4 2.5 1.2 1 0 0 1 1 1 0 ChaB AgrB PF04647.15 NODE_82034_length_193_cov_34.373418_g74093_i0forward_frame_1 - 0.43 9.9 2.9 0.43 9.9 2.9 1.1 1 0 0 1 1 1 0 Accessory gene regulator B DUF3509 PF12021.8 NODE_82033_length_193_cov_34.626582_g74092_i0reverse_frame_1 - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3509) Folate_rec PF03024.14 NODE_82029_length_193_cov_36.227848_g74088_i0forward_frame_1 - 0.0065 16.4 0.3 0.008 16.1 0.3 1.2 1 0 0 1 1 1 1 Folate receptor family Coilin_N PF15862.5 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_1 - 0.068 13.0 13.7 0.079 12.8 13.7 1.1 1 0 0 1 1 1 0 Coilin N-terminus PGA2 PF07543.12 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_1 - 0.78 9.7 11.4 1 9.4 11.4 1.3 1 0 0 1 1 1 0 Protein trafficking PGA2 RNA_polI_A34 PF08208.11 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_1 - 2.1 8.4 17.3 2.3 8.2 17.3 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 MerR PF00376.23 NODE_82023_length_193_cov_41.664557_g74082_i0forward_frame_1 - 0.091 12.6 0.1 9.1 6.1 0.0 2.2 2 0 0 2 2 2 0 MerR family regulatory protein GPDPase_memb PF10110.9 NODE_82017_length_193_cov_45.303797_g74076_i0forward_frame_1 - 0.17 10.6 2.9 0.24 10.2 2.9 1.2 1 0 0 1 1 1 0 Membrane domain of glycerophosphoryl diester phosphodiesterase Integrin_beta PF00362.18 NODE_82016_length_193_cov_45.424051_g74075_i0forward_frame_1 - 0.11 12.1 0.1 0.13 11.9 0.1 1.0 1 0 0 1 1 1 0 Integrin beta chain VWA domain MCR_D PF02505.14 NODE_82015_length_193_cov_48.196203_g74074_i0forward_frame_1 - 0.024 14.5 0.3 0.027 14.3 0.3 1.0 1 0 0 1 1 1 0 Methyl-coenzyme M reductase operon protein D DUF2269 PF10027.9 NODE_82005_length_193_cov_64.905063_g74064_i0forward_frame_1 - 0.042 13.9 0.0 0.046 13.8 0.0 1.0 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2269) PLRV_ORF5 PF01690.17 NODE_81998_length_193_cov_73.753165_g74057_i0reverse_frame_1 - 0.073 11.8 0.1 0.074 11.8 0.1 1.0 1 0 0 1 1 1 0 Potato leaf roll virus readthrough protein DUF4116 PF13475.6 NODE_81993_length_193_cov_81.025316_g74052_i0reverse_frame_1 - 0.022 14.5 0.0 0.026 14.2 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4116) STAT1_TAZ2bind PF12162.8 NODE_81993_length_193_cov_81.025316_g74052_i0forward_frame_1 - 0.1 12.2 0.2 0.21 11.2 0.2 1.5 1 0 0 1 1 1 0 STAT1 TAZ2 binding domain Enkurin PF13864.6 NODE_81974_length_193_cov_223.500000_g74033_i0forward_frame_1 - 0.025 15.0 0.8 0.037 14.5 0.8 1.2 1 0 0 1 1 1 0 Calmodulin-binding DUF1754 PF08555.10 NODE_81970_length_193_cov_265.797468_g74029_i0reverse_frame_1 - 0.063 14.1 6.4 0.099 13.5 6.4 1.3 1 0 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) Enkurin PF13864.6 NODE_81968_length_193_cov_356.316456_g74027_i0reverse_frame_1 - 0.025 15.0 0.8 0.037 14.5 0.8 1.2 1 0 0 1 1 1 0 Calmodulin-binding Enkurin PF13864.6 NODE_81966_length_193_cov_406.303797_g74025_i0reverse_frame_1 - 0.025 15.0 0.8 0.037 14.5 0.8 1.2 1 0 0 1 1 1 0 Calmodulin-binding TPR_11 PF13414.6 NODE_81963_length_193_cov_3283.170886_g74022_i0forward_frame_1 - 0.033 13.9 0.1 0.18 11.5 0.0 2.0 2 0 0 2 2 2 0 TPR repeat DUF2855 PF11017.8 NODE_81959_length_194_cov_0.836478_g74018_i0forward_frame_1 - 0.2 11.4 0.1 0.2 11.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2855) Pkinase PF00069.25 NODE_81952_length_194_cov_0.930818_g74011_i0reverse_frame_1 - 1.4e-09 37.7 0.8 1.7e-09 37.4 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_81952_length_194_cov_0.930818_g74011_i0reverse_frame_1 - 1.5e-06 27.7 0.1 1.8e-06 27.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_81952_length_194_cov_0.930818_g74011_i0reverse_frame_1 - 0.0086 14.9 0.2 0.0093 14.8 0.2 1.0 1 0 0 1 1 1 1 Fungal protein kinase CFEM PF05730.11 NODE_81948_length_194_cov_0.974843_g74007_i0reverse_frame_1 - 0.013 15.6 0.3 0.017 15.2 0.3 1.1 1 0 0 1 1 1 0 CFEM domain Pkinase PF00069.25 NODE_81945_length_194_cov_0.993711_g74004_i0forward_frame_1 - 3.1e-12 46.4 0.0 3.1e-12 46.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_81945_length_194_cov_0.993711_g74004_i0forward_frame_1 - 6.5e-07 28.9 0.0 6.7e-07 28.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Plavaka PF18759.1 NODE_81942_length_194_cov_1.000000_g74001_i0reverse_frame_1 - 0.051 12.8 0.1 0.051 12.8 0.1 1.0 1 0 0 1 1 1 0 Plavaka transposase PMP22_Claudin PF00822.20 NODE_81941_length_194_cov_1.000000_g74000_i0forward_frame_1 - 0.11 12.4 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin family BTK PF00779.19 NODE_81940_length_194_cov_1.000000_g73999_i0reverse_frame_1 - 5.9 6.8 11.4 3 7.7 1.3 2.3 1 1 1 2 2 2 0 BTK motif HHH_8 PF14716.6 NODE_81936_length_194_cov_1.000000_g73995_i0forward_frame_1 - 0.15 12.4 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 Helix-hairpin-helix domain FAM124 PF15067.6 NODE_81933_length_194_cov_1.000000_g73992_i0forward_frame_1 - 0.084 12.5 0.4 0.083 12.5 0.4 1.0 1 0 0 1 1 1 0 FAM124 family NrfD_2 PF14589.6 NODE_81930_length_194_cov_1.000000_g73989_i0reverse_frame_1 - 0.02 14.9 0.1 0.023 14.7 0.1 1.0 1 0 0 1 1 1 0 Polysulfide reductase Prok-E2_B PF14461.6 NODE_81915_length_194_cov_1.006289_g73974_i0reverse_frame_1 - 0.054 13.2 0.4 0.061 13.0 0.4 1.0 1 0 0 1 1 1 0 Prokaryotic E2 family B NADH_dhqG_C PF09326.11 NODE_81910_length_194_cov_1.006289_g73969_i0forward_frame_1 - 0.11 13.2 0.0 0.16 12.7 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit G, C-terminal DUF5549 PF17703.1 NODE_81900_length_194_cov_1.006289_g73959_i0forward_frame_1 - 0.84 9.3 3.9 0.93 9.1 3.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5549) CoatB PF10389.9 NODE_81893_length_194_cov_1.006289_g73952_i0forward_frame_1 - 0.21 11.5 0.9 0.31 10.9 0.9 1.3 1 0 0 1 1 1 0 Bacteriophage coat protein B Adeno_E3_CR2 PF02439.15 NODE_81893_length_194_cov_1.006289_g73952_i0forward_frame_1 - 2 8.3 4.7 2.8 7.8 4.7 1.3 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 L27_1 PF09058.10 NODE_81888_length_194_cov_1.006289_g73947_i0reverse_frame_1 - 0.16 11.9 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 L27_1 JTB PF05439.12 NODE_81885_length_194_cov_1.006289_g73944_i0forward_frame_1 - 0.082 13.0 0.1 0.095 12.8 0.1 1.0 1 0 0 1 1 1 0 Jumping translocation breakpoint protein (JTB) Spc42p PF11544.8 NODE_81881_length_194_cov_1.006289_g73940_i0reverse_frame_1 - 0.035 14.1 2.8 0.041 13.9 2.8 1.2 1 0 0 1 1 1 0 Spindle pole body component Spc42p Papo_T_antigen PF02380.15 NODE_81876_length_194_cov_1.006289_g73935_i0reverse_frame_1 - 0.016 15.4 0.0 0.02 15.0 0.0 1.1 1 0 0 1 1 1 0 T-antigen specific domain Herpes_ICP4_C PF03585.14 NODE_81875_length_194_cov_1.006289_g73934_i0reverse_frame_1 - 0.091 11.5 0.1 0.11 11.3 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus ICP4-like protein C-terminal region Myc_target_1 PF15179.6 NODE_81874_length_194_cov_1.006289_g73933_i0forward_frame_1 - 0.22 11.4 0.1 0.26 11.2 0.1 1.1 1 0 0 1 1 1 0 Myc target protein 1 Nudix_N_2 PF14803.6 NODE_81863_length_194_cov_1.056604_g73922_i0forward_frame_1 - 0.095 12.6 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 Nudix N-terminal IBV_3A PF03617.13 NODE_81861_length_194_cov_1.069182_g73920_i0reverse_frame_1 - 0.02 14.9 1.5 0.027 14.4 1.5 1.3 1 0 0 1 1 1 0 IBV 3A protein HNH_5 PF14279.6 NODE_81859_length_194_cov_1.081761_g73918_i0forward_frame_1 - 0.098 12.5 1.9 0.11 12.3 0.2 1.8 2 0 0 2 2 2 0 HNH endonuclease Kelch_6 PF13964.6 NODE_81850_length_194_cov_1.113208_g73909_i0reverse_frame_1 - 0.11 12.8 1.0 0.15 12.4 1.0 1.2 1 0 0 1 1 1 0 Kelch motif TMEM61 PF15105.6 NODE_81847_length_194_cov_1.132075_g73906_i0forward_frame_1 - 1.3 8.8 3.1 1.5 8.6 3.1 1.1 1 0 0 1 1 1 0 TMEM61 protein family DUF2207 PF09972.9 NODE_81847_length_194_cov_1.132075_g73906_i0forward_frame_1 - 1.4 7.5 3.3 1.5 7.5 3.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PurS PF02700.14 NODE_81844_length_194_cov_1.138365_g73903_i0reverse_frame_1 - 0.15 12.2 0.0 2 8.6 0.0 2.0 1 1 1 2 2 2 0 Phosphoribosylformylglycinamidine (FGAM) synthase Acetyltransf_1 PF00583.25 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 7.5e-09 35.9 0.0 8.5e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 2.3e-08 34.3 0.0 2.4e-08 34.3 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 1.1e-06 28.5 0.0 1.3e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 2.7e-06 27.3 0.0 3e-06 27.2 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.00024 21.8 0.0 0.00028 21.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.00087 19.7 0.0 0.0011 19.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.0017 18.0 0.0 0.0019 17.8 0.0 1.0 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_CG PF14542.6 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.0044 17.1 0.1 0.0062 16.6 0.1 1.2 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase EAL PF00563.20 NODE_81842_length_194_cov_1.144654_g73901_i0forward_frame_1 - 0.059 12.9 0.0 0.067 12.7 0.0 1.1 1 0 0 1 1 1 0 EAL domain Ig_3 PF13927.6 NODE_81838_length_194_cov_1.176101_g73897_i0reverse_frame_1 - 0.048 14.3 0.0 0.068 13.8 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin domain Herpes_UL16 PF03044.14 NODE_81830_length_194_cov_1.207547_g73889_i0reverse_frame_1 - 0.13 11.5 0.2 0.14 11.4 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family Sugar_tr PF00083.24 NODE_81829_length_194_cov_1.220126_g73888_i0forward_frame_1 - 4.1e-05 22.6 4.4 4.5e-05 22.5 4.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_81829_length_194_cov_1.220126_g73888_i0forward_frame_1 - 0.0094 14.9 7.3 0.01 14.8 7.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF5592 PF17332.2 NODE_81829_length_194_cov_1.220126_g73888_i0forward_frame_1 - 0.1 13.1 2.2 0.13 12.8 2.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5592) ABC2_membrane_3 PF12698.7 NODE_81829_length_194_cov_1.220126_g73888_i0forward_frame_1 - 2.2 7.3 9.9 2.3 7.2 9.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Holin_BhlA PF10960.8 NODE_81820_length_194_cov_1.251572_g73879_i0forward_frame_1 - 0.032 14.2 0.2 0.04 13.9 0.2 1.2 1 0 0 1 1 1 0 BhlA holin family EutK_C PF16365.5 NODE_81817_length_194_cov_1.251572_g73876_i0forward_frame_1 - 0.061 13.4 0.1 0.068 13.2 0.1 1.2 1 0 0 1 1 1 0 Ethanolamine utilization protein EutK C-terminus T6SS_HCP PF05638.12 NODE_81816_length_194_cov_1.257862_g73875_i0forward_frame_1 - 3.7e-05 24.1 0.0 3.9e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Type VI secretion system effector, Hcp DUF1140 PF06600.11 NODE_81815_length_194_cov_1.257862_g73874_i0forward_frame_1 - 0.031 14.7 0.1 0.038 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1140) Epimerase PF01370.21 NODE_81807_length_194_cov_1.270440_g73866_i0reverse_frame_1 - 9.8e-06 25.2 0.0 1.2e-05 25.0 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 NODE_81807_length_194_cov_1.270440_g73866_i0reverse_frame_1 - 0.0026 17.2 0.0 0.0028 17.1 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase ISP1_C PF18161.1 NODE_81800_length_194_cov_1.295597_g73859_i0reverse_frame_1 - 0.012 15.6 0.8 0.013 15.4 0.8 1.1 1 0 0 1 1 1 0 ISP1 C-terminal DED PF01335.21 NODE_81800_length_194_cov_1.295597_g73859_i0forward_frame_1 - 0.052 13.8 0.1 0.052 13.8 0.1 1.2 1 0 0 1 1 1 0 Death effector domain TMCO5 PF14992.6 NODE_81800_length_194_cov_1.295597_g73859_i0forward_frame_1 - 0.41 10.2 2.7 0.43 10.1 2.7 1.0 1 0 0 1 1 1 0 TMCO5 family RRN9 PF10680.9 NODE_81798_length_194_cov_1.308176_g73857_i0reverse_frame_1 - 0.081 13.2 0.1 0.096 13.0 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks416.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks416.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks416.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks416.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:44:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SSP160 PF06933.11 NODE_81792_length_194_cov_1.333333_g73851_i0reverse_frame_1 - 2.7 6.1 6.5 2.9 6.0 6.5 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Dicty_REP PF05086.12 NODE_81792_length_194_cov_1.333333_g73851_i0reverse_frame_1 - 2.8 5.8 3.1 2.6 5.9 3.1 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein DUF5607 PF18355.1 NODE_81788_length_194_cov_1.377358_g73847_i0reverse_frame_1 - 0.089 13.2 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5607) cNMP_binding PF00027.29 NODE_81786_length_194_cov_1.383648_g73845_i0forward_frame_1 - 1.1e-12 47.8 0.0 1.3e-12 47.6 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain TMEM247 PF15444.6 NODE_81784_length_194_cov_1.396226_g73843_i0reverse_frame_1 - 0.35 10.9 1.7 0.38 10.8 1.7 1.2 1 0 0 1 1 1 0 Transmembrane protein 247 DNA_pol_viral_C PF00336.18 NODE_81781_length_194_cov_1.415094_g73840_i0reverse_frame_1 - 0.063 12.7 0.0 0.071 12.5 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) C-terminal domain RVT_2 PF07727.14 NODE_81776_length_194_cov_1.421384_g73835_i0forward_frame_1 - 0.0059 16.3 0.8 0.006 16.2 0.8 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4959 PF16323.5 NODE_81775_length_194_cov_1.433962_g73834_i0forward_frame_1 - 0.095 13.0 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4959) DUF1196 PF06709.11 NODE_81772_length_194_cov_1.440252_g73831_i0forward_frame_1 - 0.067 13.4 0.1 0.086 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1196) Tom5 PF10642.9 NODE_81771_length_194_cov_1.459119_g73830_i0forward_frame_1 - 0.02 14.9 0.3 1.7 8.7 0.0 2.1 1 1 1 2 2 2 0 Mitochondrial import receptor subunit or translocase DUF5480 PF17576.2 NODE_81771_length_194_cov_1.459119_g73830_i0forward_frame_1 - 0.039 13.9 0.2 0.047 13.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5480) Omega-toxin PF06357.11 NODE_81765_length_194_cov_1.477987_g73824_i0reverse_frame_1 - 0.016 15.0 0.9 0.016 15.0 0.9 2.7 2 1 1 3 3 3 0 Omega-atracotoxin SR-25 PF10500.9 NODE_81763_length_194_cov_1.490566_g73822_i0reverse_frame_1 - 0.023 14.3 11.0 0.023 14.3 11.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_81763_length_194_cov_1.490566_g73822_i0reverse_frame_1 - 4.6 8.0 12.7 5.8 7.7 12.7 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein SLAIN PF15301.6 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 0.015 14.5 2.4 0.017 14.4 2.4 1.1 1 0 0 1 1 1 0 SLAIN motif-containing family CENP-B_dimeris PF09026.10 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 0.59 10.6 11.3 0.67 10.4 11.3 1.2 1 0 0 1 1 1 0 Centromere protein B dimerisation domain RXT2_N PF08595.11 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 0.64 10.0 4.3 0.71 9.9 4.3 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal PBP1_TM PF14812.6 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 7.6 7.0 12.1 9 6.7 12.1 1.3 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DNA_pol_phi PF04931.13 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_1 - 9.6 4.2 8.1 9.3 4.2 8.1 1.0 1 0 0 1 1 1 0 DNA polymerase phi Meckelin PF09773.9 NODE_81757_length_194_cov_1.490566_g73816_i0reverse_frame_1 - 4.1 5.4 6.3 4.7 5.2 6.3 1.0 1 0 0 1 1 1 0 Meckelin (Transmembrane protein 67) MetJ PF01340.20 NODE_81756_length_194_cov_1.496855_g73815_i0forward_frame_1 - 0.068 13.1 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Met Apo-repressor, MetJ Transketolase_C PF02780.20 NODE_81736_length_194_cov_1.509434_g73795_i0reverse_frame_1 - 6.9e-06 25.9 0.1 8.9e-06 25.6 0.1 1.1 1 0 0 1 1 1 1 Transketolase, C-terminal domain Alba PF01918.21 NODE_81736_length_194_cov_1.509434_g73795_i0reverse_frame_1 - 0.002 17.9 0.1 0.0021 17.9 0.1 1.2 1 0 0 1 1 1 1 Alba HD_4 PF13328.6 NODE_81728_length_194_cov_1.509434_g73787_i0reverse_frame_1 - 3.3e-05 23.7 0.0 5.5e-05 22.9 0.0 1.4 2 0 0 2 2 2 1 HD domain Sigma70_r4 PF04545.16 NODE_81728_length_194_cov_1.509434_g73787_i0reverse_frame_1 - 0.067 12.7 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 7tm_6 PF02949.20 NODE_81723_length_194_cov_1.534591_g73782_i0reverse_frame_1 - 0.06 12.4 3.5 0.061 12.4 3.5 1.0 1 0 0 1 1 1 0 7tm Odorant receptor F-box PF00646.33 NODE_81720_length_194_cov_1.566038_g73779_i0forward_frame_1 - 0.086 12.8 2.7 0.11 12.4 2.7 1.3 1 0 0 1 1 1 0 F-box domain Toxin_14 PF07829.11 NODE_81714_length_194_cov_1.610063_g73773_i0reverse_frame_1 - 0.03 14.3 4.6 0.03 14.3 4.6 2.6 2 1 1 3 3 3 0 Alpha-A conotoxin PIVA-like protein ATP1G1_PLM_MAT8 PF02038.16 NODE_81712_length_194_cov_1.610063_g73771_i0reverse_frame_1 - 0.053 13.0 1.6 0.069 12.6 1.6 1.2 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family DUF3285 PF11688.8 NODE_81712_length_194_cov_1.610063_g73771_i0reverse_frame_1 - 0.11 12.5 0.1 1.9 8.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3285) DDE_Tnp_1_6 PF13751.6 NODE_81708_length_194_cov_1.647799_g73767_i0forward_frame_1 - 0.69 10.1 5.2 0.76 10.0 5.2 1.1 1 0 0 1 1 1 0 Transposase DDE domain Opy2 PF09463.10 NODE_81708_length_194_cov_1.647799_g73767_i0forward_frame_1 - 2 8.8 12.4 0.43 10.9 2.0 3.2 2 2 1 3 3 3 0 Opy2 protein DUF3627 PF12299.8 NODE_81702_length_194_cov_1.685535_g73761_i0forward_frame_1 - 0.03 14.4 0.0 0.034 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3627) Herpes_LMP1 PF05297.11 NODE_81694_length_194_cov_1.710692_g73753_i0reverse_frame_1 - 0.018 14.2 0.3 0.019 14.2 0.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Alpha-amyl_C2 PF07821.12 NODE_81692_length_194_cov_1.716981_g73751_i0reverse_frame_1 - 0.0051 17.0 0.0 0.0056 16.9 0.0 1.1 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain LAX PF15681.5 NODE_81691_length_194_cov_1.716981_g73750_i0forward_frame_1 - 0.17 10.7 0.1 0.18 10.6 0.1 1.0 1 0 0 1 1 1 0 Lymphocyte activation family X CARM1 PF11531.8 NODE_81688_length_194_cov_1.748428_g73747_i0reverse_frame_1 - 0.16 12.2 2.2 0.16 12.1 2.2 1.1 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal TLE_N PF03920.15 NODE_81687_length_194_cov_1.754717_g73746_i0forward_frame_1 - 0.032 14.3 0.3 0.032 14.3 0.3 1.1 1 0 0 1 1 1 0 Groucho/TLE N-terminal Q-rich domain NikR_C PF08753.11 NODE_81687_length_194_cov_1.754717_g73746_i0forward_frame_1 - 2.1 8.5 5.2 1.1 9.5 0.3 2.0 1 1 1 2 2 2 0 NikR C terminal nickel binding domain UL42 PF17638.2 NODE_81682_length_194_cov_1.767296_g73741_i0reverse_frame_1 - 0.0025 17.8 0.2 0.0029 17.6 0.2 1.1 1 0 0 1 1 1 1 HCMV UL42 Sugar_tr PF00083.24 NODE_81682_length_194_cov_1.767296_g73741_i0reverse_frame_1 - 0.019 13.8 0.8 0.023 13.6 0.8 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter MFS_1 PF07690.16 NODE_81682_length_194_cov_1.767296_g73741_i0reverse_frame_1 - 0.024 13.6 0.6 0.028 13.3 0.6 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF4491 PF14898.6 NODE_81682_length_194_cov_1.767296_g73741_i0reverse_frame_1 - 0.069 13.6 0.2 0.079 13.4 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) His_Me_b4a2 PF18275.1 NODE_81678_length_194_cov_1.811321_g73737_i0forward_frame_1 - 0.081 13.0 7.8 0.29 11.3 7.8 1.8 1 1 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain PapD_C PF02753.17 NODE_81673_length_194_cov_1.867925_g73732_i0reverse_frame_1 - 0.11 12.8 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Pili assembly chaperone PapD, C-terminal domain RIH_assoc PF08454.11 NODE_81664_length_194_cov_1.943396_g73723_i0reverse_frame_1 - 0.19 11.6 3.0 0.25 11.2 3.0 1.1 1 0 0 1 1 1 0 RyR and IP3R Homology associated MIF4G_like PF09088.11 NODE_81663_length_194_cov_1.955975_g73722_i0forward_frame_1 - 0.17 11.7 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 MIF4G like Colipase PF01114.18 NODE_81660_length_194_cov_1.962264_g73719_i0reverse_frame_1 - 0.88 9.3 9.7 2.7 7.8 1.0 2.3 2 0 0 2 2 2 0 Colipase, N-terminal domain SNF PF00209.18 NODE_81651_length_194_cov_2.056604_g73710_i0reverse_frame_1 - 1.1e-19 70.6 2.5 1.1e-19 70.5 2.5 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family Chisel PF15355.6 NODE_81650_length_194_cov_2.056604_g73709_i0forward_frame_1 - 0.027 14.7 0.0 0.031 14.5 0.0 1.1 1 0 0 1 1 1 0 Stretch-responsive small skeletal muscle X protein, Chisel Phospholamban PF04272.14 NODE_81648_length_194_cov_2.125786_g73707_i0reverse_frame_1 - 0.94 9.0 5.3 0.69 9.4 3.7 1.6 1 1 1 2 2 2 0 Phospholamban Pox_E10 PF04805.12 NODE_81643_length_194_cov_2.176101_g73702_i0reverse_frame_1 - 1.4 8.8 4.1 8 6.4 1.2 2.1 1 1 1 2 2 2 0 E10-like protein conserved region Peptidase_M14 PF00246.24 NODE_81638_length_194_cov_2.257862_g73697_i0reverse_frame_1 - 8.9e-11 42.1 0.0 8.9e-11 42.1 0.0 1.0 1 0 0 1 1 1 1 Zinc carboxypeptidase Zip PF02535.22 NODE_81636_length_194_cov_2.264151_g73695_i0reverse_frame_1 - 0.25 10.5 4.2 0.29 10.3 4.2 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Methyltransf_32 PF13679.6 NODE_81620_length_194_cov_2.477987_g73679_i0forward_frame_1 - 0.054 13.5 4.8 0.067 13.2 4.8 1.1 1 0 0 1 1 1 0 Methyltransferase domain HIRA_B PF09453.10 NODE_81615_length_194_cov_2.572327_g73674_i0reverse_frame_1 - 0.0081 16.0 0.4 0.015 15.1 0.0 1.6 2 0 0 2 2 2 1 HIRA B motif CC190 PF15768.5 NODE_81613_length_194_cov_2.616352_g73672_i0forward_frame_1 - 0.14 12.2 0.1 0.17 11.9 0.1 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 190 DUF5463 PF17551.2 NODE_81603_length_194_cov_2.937107_g73662_i0reverse_frame_1 - 1 9.3 4.7 4.6 7.3 0.6 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5463) DUF2373 PF10180.9 NODE_81598_length_194_cov_3.094340_g73657_i0reverse_frame_1 - 0.058 13.2 0.5 0.09 12.6 0.5 1.3 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2373) AAA_11 PF13086.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 3.4e-12 46.7 0.3 3.7e-12 46.6 0.3 1.0 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 6.5e-08 32.5 0.0 6.9e-08 32.4 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 3.9e-06 27.3 0.2 4.2e-06 27.1 0.2 1.0 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 3.8e-05 23.8 0.0 4.4e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF2075 PF09848.9 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 4.9e-05 22.7 0.0 5.6e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) DEAD PF00270.29 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.00047 20.0 0.4 0.00051 19.9 0.4 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0015 18.8 0.0 0.0018 18.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain PhoH PF02562.16 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0018 17.8 0.0 0.002 17.6 0.0 1.0 1 0 0 1 1 1 1 PhoH-like protein AAA_10 PF12846.7 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0052 15.8 0.0 0.0054 15.7 0.0 1.0 1 0 0 1 1 1 1 AAA-like domain Mg_chelatase PF01078.21 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0054 16.1 0.0 0.0058 16.0 0.0 1.1 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Helicase_RecD PF05127.14 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0074 16.2 0.0 0.0096 15.8 0.0 1.2 1 0 0 1 1 1 1 Helicase ATPase PF06745.13 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.0097 15.3 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_16 PF13191.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.011 16.1 0.0 0.012 16.0 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain Sigma54_activat PF00158.26 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.013 15.2 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain RuvB_N PF05496.12 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.013 15.2 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.021 15.0 0.1 0.025 14.7 0.1 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.025 14.5 0.0 0.029 14.3 0.0 1.1 1 0 0 1 1 1 0 NACHT domain RNA_helicase PF00910.22 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.026 14.9 0.0 0.035 14.5 0.0 1.2 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.03 14.0 0.0 0.03 14.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA PF00004.29 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.033 14.6 0.1 0.041 14.3 0.1 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.036 13.5 0.0 0.04 13.4 0.0 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain T2SSE PF00437.20 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.042 12.9 0.0 0.044 12.8 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_7 PF12775.7 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.043 13.3 0.0 0.044 13.3 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.05 13.6 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.076 12.6 0.0 0.076 12.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.091 11.9 0.0 0.091 11.9 0.0 1.0 1 0 0 1 1 1 0 PIF1-like helicase SRP54 PF00448.22 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.093 12.3 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_24 PF13479.6 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.094 12.4 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain ArsA_ATPase PF02374.15 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.13 11.4 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Anion-transporting ATPase TsaE PF02367.17 NODE_81596_length_194_cov_3.333333_g73655_i0reverse_frame_1 - 0.14 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DsbC_N PF10411.9 NODE_81589_length_194_cov_3.710692_g73648_i0forward_frame_1 - 0.012 15.1 0.5 0.017 14.5 0.1 1.6 2 0 0 2 2 2 0 Disulfide bond isomerase protein N-terminus DUF4667 PF15700.5 NODE_81587_length_194_cov_3.874214_g73646_i0forward_frame_1 - 3.7 7.6 14.4 3.9 7.5 14.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4667) CRM1_repeat_2 PF18784.1 NODE_81583_length_194_cov_4.471698_g73642_i0reverse_frame_1 - 0.18 11.5 0.1 0.27 10.9 0.1 1.2 1 0 0 1 1 1 0 CRM1 / Exportin repeat 2 DUF1741 PF08427.10 NODE_81581_length_194_cov_4.886792_g73640_i0reverse_frame_1 - 0.053 13.2 3.0 0.057 13.1 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1741) RNA_pol_Rpb1_R PF05001.13 NODE_81577_length_194_cov_10.930818_g73636_i0reverse_frame_1 - 0.2 12.1 0.6 0.2 12.1 0.6 2.1 3 0 0 3 3 3 0 RNA polymerase Rpb1 C-terminal repeat STAS PF01740.21 NODE_81575_length_194_cov_16.025157_g73634_i0forward_frame_1 - 0.028 14.0 0.0 0.036 13.7 0.0 1.1 1 0 0 1 1 1 0 STAS domain DUF1477 PF07346.11 NODE_81571_length_194_cov_21.735849_g73630_i0reverse_frame_1 - 0.028 14.7 0.3 0.031 14.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1477) Toxin_7 PF05980.12 NODE_81569_length_194_cov_22.496855_g73628_i0forward_frame_1 - 0.073 13.3 1.5 0.096 13.0 0.7 1.6 2 0 0 2 2 2 0 Toxin 7 DUF2830 PF11125.8 NODE_81562_length_194_cov_28.729560_g73621_i0forward_frame_1 - 0.085 12.8 3.1 0.93 9.5 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2830) DUF1375 PF07119.12 NODE_81560_length_194_cov_29.792453_g73619_i0forward_frame_1 - 0.16 12.4 1.4 1.1 9.7 1.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1375) TcdB_toxin_midC PF12255.8 NODE_81555_length_194_cov_34.641509_g73614_i0reverse_frame_1 - 0.054 13.6 0.0 0.058 13.5 0.0 1.1 1 0 0 1 1 1 0 Insecticide toxin TcdB middle/C-terminal region Ala_racemase_N PF01168.20 NODE_81554_length_194_cov_35.069182_g73613_i0forward_frame_1 - 0.0075 15.9 0.0 0.008 15.8 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain PNK3P PF08645.11 NODE_81547_length_194_cov_40.301887_g73606_i0reverse_frame_1 - 0.013 15.2 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase DUF842 PF05811.13 NODE_81545_length_194_cov_41.880503_g73604_i0forward_frame_1 - 0.091 12.5 8.5 0.11 12.2 8.5 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF842) DUF3399 PF11879.8 NODE_81542_length_194_cov_43.459119_g73601_i0reverse_frame_1 - 0.065 13.6 1.7 0.065 13.6 1.7 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3399) Hydrolase_4 PF12146.8 NODE_81535_length_194_cov_51.245283_g73594_i0reverse_frame_1 - 0.03 13.6 0.0 0.03 13.6 0.0 1.0 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF2633 PF11119.8 NODE_81526_length_194_cov_58.169811_g73585_i0reverse_frame_1 - 1.1 9.2 3.4 2.3 8.2 3.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2633) DUF2628 PF10947.8 NODE_81511_length_194_cov_94.352201_g73570_i0reverse_frame_1 - 0.49 10.8 3.7 0.71 10.3 3.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) RFX5_N PF18326.1 NODE_81510_length_194_cov_94.496855_g73569_i0reverse_frame_1 - 0.009 15.7 0.6 2.3 8.0 0.0 2.3 2 1 0 2 2 2 2 RFX5 N-terminal domain SPT6_acidic PF14632.6 NODE_81508_length_194_cov_96.968553_g73567_i0reverse_frame_1 - 0.19 12.4 8.1 0.44 11.2 8.1 1.6 1 1 0 1 1 1 0 Acidic N-terminal SPT6 AP3D1 PF06375.11 NODE_81508_length_194_cov_96.968553_g73567_i0reverse_frame_1 - 0.51 10.6 9.3 0.64 10.2 9.3 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 SR-25 PF10500.9 NODE_81508_length_194_cov_96.968553_g73567_i0reverse_frame_1 - 0.63 9.6 14.7 0.66 9.5 14.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Myticin-prepro PF10690.9 NODE_81506_length_194_cov_101.044025_g73565_i0forward_frame_1 - 0.037 14.3 2.0 0.041 14.1 2.0 1.0 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel ETRAMP PF09716.10 NODE_81498_length_194_cov_147.125786_g73557_i0reverse_frame_1 - 0.045 13.8 6.1 0.057 13.5 6.1 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) zf-HYPF PF07503.12 NODE_81496_length_194_cov_149.955975_g73555_i0forward_frame_1 - 0.0044 16.7 2.1 0.039 13.7 2.1 2.0 1 1 0 1 1 1 1 HypF finger DUF4694 PF15765.5 NODE_81493_length_194_cov_222.106918_g73552_i0forward_frame_1 - 0.098 12.7 1.2 0.098 12.7 1.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) DUF3599 PF12206.8 NODE_81489_length_194_cov_317.962264_g73548_i0reverse_frame_1 - 0.12 12.7 0.3 0.14 12.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3599) HTH_30 PF13556.6 NODE_81480_length_195_cov_0.775000_g73539_i0forward_frame_1 - 0.13 12.1 0.1 0.17 11.7 0.1 1.2 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain GlutR_dimer PF00745.20 NODE_81479_length_195_cov_0.868750_g73538_i0reverse_frame_1 - 0.023 15.1 0.2 0.028 14.9 0.2 1.1 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, dimerisation domain DUF2583 PF10762.9 NODE_81477_length_195_cov_0.881250_g73536_i0reverse_frame_1 - 7.5e-23 80.8 1.1 9.7e-23 80.4 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2583) C9orf72-like PF15019.6 NODE_81471_length_195_cov_0.937500_g73530_i0reverse_frame_1 - 0.023 14.2 0.4 0.025 14.1 0.4 1.0 1 0 0 1 1 1 0 C9orf72-like protein family Quaking_NLS PF16551.5 NODE_81470_length_195_cov_0.943750_g73529_i0reverse_frame_1 - 0.026 14.2 0.2 0.037 13.7 0.2 1.2 1 0 0 1 1 1 0 Putative nuclear localisation signal of quaking CSRNP_N PF16019.5 NODE_81465_length_195_cov_0.981250_g73524_i0forward_frame_1 - 7.6 6.4 10.7 7.2 6.5 10.7 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus DUF1315 PF07023.12 NODE_81462_length_195_cov_0.987500_g73521_i0forward_frame_1 - 0.11 12.6 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1315) GAS2 PF02187.17 NODE_81460_length_195_cov_0.987500_g73519_i0forward_frame_1 - 0.0062 16.6 0.0 0.0089 16.1 0.0 1.3 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain DUF4491 PF14898.6 NODE_81451_length_195_cov_0.993750_g73510_i0forward_frame_1 - 0.07 13.6 0.0 0.09 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4491) zf-nanos PF05741.13 NODE_81450_length_195_cov_0.993750_g73509_i0reverse_frame_1 - 0.019 15.2 2.4 0.019 15.2 2.4 1.5 1 1 0 1 1 1 0 Nanos RNA binding domain Arg_decarb_HB PF17810.1 NODE_81450_length_195_cov_0.993750_g73509_i0reverse_frame_1 - 0.054 13.8 0.0 0.07 13.4 0.0 1.1 1 0 0 1 1 1 0 Arginine decarboxylase helical bundle domain zf-HIT PF04438.16 NODE_81450_length_195_cov_0.993750_g73509_i0reverse_frame_1 - 0.065 13.1 5.2 0.065 13.1 5.2 2.1 2 1 0 2 2 2 0 HIT zinc finger Toxin_9 PF02819.15 NODE_81447_length_195_cov_0.993750_g73506_i0reverse_frame_1 - 2.4 8.5 12.8 0.16 12.3 7.7 1.8 1 1 0 1 1 1 0 Spider toxin MogR_DNAbind PF12181.8 NODE_81444_length_195_cov_0.993750_g73503_i0reverse_frame_1 - 0.0011 18.8 0.0 0.0012 18.7 0.0 1.0 1 0 0 1 1 1 1 DNA binding domain of the motility gene repressor (MogR) zf-CCCH_7 PF18586.1 NODE_81434_length_195_cov_1.000000_g73493_i0reverse_frame_1 - 0.00089 19.5 0.4 0.0013 19.0 0.4 1.3 1 0 0 1 1 1 1 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 DEK_C PF08766.11 NODE_81427_length_195_cov_1.000000_g73486_i0forward_frame_1 - 0.16 11.9 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 DEK C terminal domain APP_N PF02177.16 NODE_81424_length_195_cov_1.000000_g73483_i0reverse_frame_1 - 0.046 14.1 0.0 0.049 14.0 0.0 1.1 1 0 0 1 1 1 0 Amyloid A4 N-terminal heparin-binding Megourin PF17560.2 NODE_81422_length_195_cov_1.000000_g73481_i0forward_frame_1 - 0.065 13.5 0.0 0.09 13.0 0.0 1.2 1 0 0 1 1 1 0 Aphid Megourins Xin PF08043.12 NODE_81420_length_195_cov_1.000000_g73479_i0forward_frame_1 - 0.3 10.8 1.0 0.52 10.0 1.0 1.4 1 0 0 1 1 1 0 Xin repeat ABC_trans_N PF14510.6 NODE_81393_length_195_cov_1.000000_g73452_i0reverse_frame_1 - 0.0044 17.6 0.3 0.035 14.7 0.0 1.9 1 1 1 2 2 2 1 ABC-transporter N-terminal Dicer_dimer PF03368.14 NODE_81387_length_195_cov_1.000000_g73446_i0forward_frame_1 - 0.1 12.8 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 Dicer dimerisation domain FANC_SAP PF18081.1 NODE_81382_length_195_cov_1.000000_g73441_i0forward_frame_1 - 0.63 10.2 4.1 0.28 11.4 0.6 1.9 1 1 1 2 2 2 0 Fanconi anemia-associated nuclease SAP domain CCDC24 PF15669.5 NODE_81376_length_195_cov_1.056250_g73435_i0forward_frame_1 - 0.064 13.1 0.0 0.068 13.0 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family EGF_3 PF12947.7 NODE_81374_length_195_cov_1.062500_g73433_i0reverse_frame_1 - 0.079 13.2 0.6 0.1 12.8 0.6 1.2 1 0 0 1 1 1 0 EGF domain EGF_MSP1_1 PF12946.7 NODE_81374_length_195_cov_1.062500_g73433_i0reverse_frame_1 - 0.08 13.0 0.7 0.11 12.6 0.7 1.2 1 0 0 1 1 1 0 MSP1 EGF domain 1 Zn_ribbon_SprT PF17283.2 NODE_81367_length_195_cov_1.112500_g73426_i0forward_frame_1 - 0.053 13.4 0.1 0.053 13.4 0.1 1.8 2 0 0 2 2 2 0 SprT-like zinc ribbon domain DUF1375 PF07119.12 NODE_81361_length_195_cov_1.137500_g73420_i0forward_frame_1 - 0.031 14.7 0.0 0.034 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1375) DUF3433 PF11915.8 NODE_81357_length_195_cov_1.150000_g73416_i0forward_frame_1 - 0.0012 19.2 0.1 0.0015 18.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3433) DUF3611 PF12263.8 NODE_81357_length_195_cov_1.150000_g73416_i0forward_frame_1 - 0.024 14.5 0.0 0.027 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3611) Vma12 PF11712.8 NODE_81354_length_195_cov_1.175000_g73413_i0reverse_frame_1 - 0.06 13.4 0.4 0.069 13.2 0.4 1.0 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase YniB PF14002.6 NODE_81339_length_195_cov_1.237500_g73398_i0forward_frame_1 - 0.055 13.2 2.9 0.067 13.0 2.9 1.0 1 0 0 1 1 1 0 YniB-like protein Glyco_hydro_59M PF17387.2 NODE_81338_length_195_cov_1.237500_g73397_i0forward_frame_1 - 0.063 13.4 0.0 0.066 13.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 59 central domain DUF3153 PF11353.8 NODE_81338_length_195_cov_1.237500_g73397_i0forward_frame_1 - 0.1 12.2 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3153) Pkinase PF00069.25 NODE_81328_length_195_cov_1.250000_g73387_i0reverse_frame_1 - 3.2e-09 36.5 0.0 3.4e-09 36.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_81328_length_195_cov_1.250000_g73387_i0reverse_frame_1 - 3.9e-05 23.0 0.0 4.3e-05 22.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_81328_length_195_cov_1.250000_g73387_i0reverse_frame_1 - 0.0029 17.0 0.0 0.0029 17.0 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Fer4_11 PF13247.6 NODE_81328_length_195_cov_1.250000_g73387_i0reverse_frame_1 - 0.15 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain V_ATPase_I PF01496.19 NODE_81328_length_195_cov_1.250000_g73387_i0forward_frame_1 - 0.098 10.6 2.4 0.1 10.5 2.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Aa_trans PF01490.18 NODE_81321_length_195_cov_1.287500_g73380_i0reverse_frame_1 - 1.6e-06 27.1 3.5 1.6e-06 27.1 3.5 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF4960 PF16324.5 NODE_81319_length_195_cov_1.300000_g73378_i0reverse_frame_1 - 0.25 10.8 0.0 0.25 10.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4960) Hum_adeno_E3A PF05393.11 NODE_81317_length_195_cov_1.312500_g73376_i0forward_frame_1 - 0.012 15.5 5.9 0.013 15.4 5.9 1.1 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein TMIE PF16038.5 NODE_81317_length_195_cov_1.312500_g73376_i0forward_frame_1 - 0.92 9.4 7.8 1.2 9.0 7.8 1.2 1 0 0 1 1 1 0 TMIE protein DUF4201 PF13870.6 NODE_81306_length_195_cov_1.375000_g73365_i0reverse_frame_1 - 0.0049 16.6 3.9 0.0076 16.0 3.9 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4201) DUF1664 PF07889.12 NODE_81306_length_195_cov_1.375000_g73365_i0reverse_frame_1 - 0.022 14.8 1.2 0.026 14.5 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) YokU PF14122.6 NODE_81306_length_195_cov_1.375000_g73365_i0reverse_frame_1 - 0.033 14.2 1.1 0.041 13.9 1.1 1.1 1 0 0 1 1 1 0 YokU-like protein, putative antitoxin DUF2746 PF10874.8 NODE_81306_length_195_cov_1.375000_g73365_i0reverse_frame_1 - 0.052 14.0 0.1 0.06 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2746) SBP_bac_3 PF00497.20 NODE_81305_length_195_cov_1.375000_g73364_i0reverse_frame_1 - 0.0035 16.8 0.0 0.0038 16.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Peptidase_M61 PF05299.12 NODE_81299_length_195_cov_1.412500_g73358_i0reverse_frame_1 - 0.073 13.5 0.1 0.081 13.3 0.1 1.1 1 0 0 1 1 1 0 M61 glycyl aminopeptidase DUF4656 PF15551.6 NODE_81291_length_195_cov_1.431250_g73350_i0forward_frame_1 - 0.2 11.2 3.7 0.22 11.0 3.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4656) zinc_ribbon_6 PF14599.6 NODE_81287_length_195_cov_1.443750_g73346_i0forward_frame_1 - 0.03 14.4 0.0 0.035 14.1 0.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon TPP1 PF10341.9 NODE_81285_length_195_cov_1.456250_g73344_i0forward_frame_1 - 0.031 14.2 0.5 0.043 13.8 0.5 1.3 1 1 0 1 1 1 0 Shelterin complex subunit, TPP1/ACD DUF3504 PF12012.8 NODE_81283_length_195_cov_1.462500_g73342_i0forward_frame_1 - 0.062 13.2 0.1 0.073 13.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3504) Anthrax_toxA PF03497.16 NODE_81276_length_195_cov_1.475000_g73335_i0forward_frame_1 - 0.12 12.5 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Anthrax toxin LF subunit Mito_carr PF00153.27 NODE_81274_length_195_cov_1.487500_g73333_i0reverse_frame_1 - 2.1e-06 27.6 0.1 3.7e-06 26.8 0.0 1.5 2 0 0 2 2 2 1 Mitochondrial carrier protein Rota_NS6 PF04866.12 NODE_81273_length_195_cov_1.487500_g73332_i0reverse_frame_1 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein 6 STOP PF05217.12 NODE_81269_length_195_cov_1.493750_g73328_i0reverse_frame_1 - 0.0012 19.1 1.6 0.0023 18.2 1.6 1.4 1 0 0 1 1 1 1 STOP protein UCH PF00443.29 NODE_81261_length_195_cov_1.500000_g73320_i0reverse_frame_1 - 1.9e-05 24.3 0.0 1.9e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Pox_Ag35 PF03286.14 NODE_81261_length_195_cov_1.500000_g73320_i0reverse_frame_1 - 0.09 12.6 0.1 0.098 12.4 0.1 1.0 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Ferlin_C PF16165.5 NODE_81251_length_195_cov_1.500000_g73310_i0forward_frame_1 - 0.099 12.6 1.4 0.097 12.6 1.4 1.2 1 0 0 1 1 1 0 Ferlin C-terminus RhoGEF67_u2 PF16614.5 NODE_81241_length_195_cov_1.525000_g73300_i0forward_frame_1 - 0.0059 16.7 0.0 0.0064 16.5 0.0 1.1 1 0 0 1 1 1 1 Unstructured region two on RhoGEF 6 and 7 PSI_integrin PF17205.3 NODE_81239_length_195_cov_1.531250_g73298_i0reverse_frame_1 - 0.015 15.0 1.0 0.024 14.4 1.0 1.3 1 0 0 1 1 1 0 Integrin plexin domain Argos PF11581.8 NODE_81233_length_195_cov_1.556250_g73292_i0forward_frame_1 - 0.021 14.9 0.1 0.023 14.7 0.1 1.1 1 0 0 1 1 1 0 Antagonist of EGFR signalling, Argos DUF4218 PF13960.6 NODE_81232_length_195_cov_1.562500_g73291_i0forward_frame_1 - 0.15 11.7 0.2 0.17 11.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4218) SR-25 PF10500.9 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 0.14 11.7 16.1 0.15 11.7 16.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein AP3D1 PF06375.11 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 0.21 11.8 14.6 0.22 11.7 14.6 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 UPF0767 PF15990.5 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 2.2 8.5 5.1 2.8 8.2 5.1 1.1 1 0 0 1 1 1 0 UPF0767 family RNA_polI_A34 PF08208.11 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 2.3 8.3 20.1 2.3 8.3 20.1 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 DUF3464 PF11947.8 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 3.6 7.3 10.4 3.9 7.2 10.4 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Connexin PF00029.19 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 3.9 7.2 7.0 3.9 7.2 7.0 1.0 1 0 0 1 1 1 0 Connexin Peptidase_S49_N PF08496.10 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 3.9 7.5 11.5 4.3 7.4 11.5 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal TSGP1 PF07771.11 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 5 7.3 12.9 6.1 7.0 12.9 1.3 1 0 0 1 1 1 0 Tick salivary peptide group 1 Coilin_N PF15862.5 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 6.9 6.5 16.5 7.6 6.3 16.5 1.1 1 0 0 1 1 1 0 Coilin N-terminus Presenilin PF01080.17 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 7.1 5.3 7.0 7.3 5.2 7.0 1.0 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_1 - 8.6 5.5 6.4 8.6 5.5 6.4 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF4131 PF13567.6 NODE_81224_length_195_cov_1.643750_g73283_i0forward_frame_1 - 6.1 6.5 7.8 6 6.5 7.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) FHIPEP PF00771.20 NODE_81217_length_195_cov_1.687500_g73276_i0reverse_frame_1 - 9.8e-06 24.3 0.0 9.8e-06 24.3 0.0 1.0 1 0 0 1 1 1 1 FHIPEP family NifU_N PF01592.16 NODE_81208_length_195_cov_1.750000_g73267_i0reverse_frame_1 - 0.12 12.5 0.9 0.13 12.4 0.9 1.1 1 0 0 1 1 1 0 NifU-like N terminal domain Acetyltransf_1 PF00583.25 NODE_81197_length_195_cov_1.825000_g73256_i0reverse_frame_1 - 5.1e-05 23.5 0.0 5.2e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 NODE_81197_length_195_cov_1.825000_g73256_i0reverse_frame_1 - 0.00028 20.8 0.0 0.00028 20.8 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 NODE_81197_length_195_cov_1.825000_g73256_i0reverse_frame_1 - 0.0037 17.6 0.0 0.0039 17.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 NODE_81197_length_195_cov_1.825000_g73256_i0reverse_frame_1 - 0.004 17.3 0.0 0.0044 17.1 0.0 1.1 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Anoctamin PF04547.12 NODE_81195_length_195_cov_1.825000_g73254_i0reverse_frame_1 - 0.27 10.0 0.6 0.31 9.8 0.6 1.0 1 0 0 1 1 1 0 Calcium-activated chloride channel Ac81 PF05820.11 NODE_81195_length_195_cov_1.825000_g73254_i0forward_frame_1 - 6.1 6.4 11.5 6.9 6.2 11.5 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 CoA_trans PF01144.23 NODE_81176_length_195_cov_1.931250_g73235_i0forward_frame_1 - 4.3e-15 55.7 0.0 4.6e-15 55.6 0.0 1.0 1 0 0 1 1 1 1 Coenzyme A transferase HTH_35 PF13693.6 NODE_81176_length_195_cov_1.931250_g73235_i0forward_frame_1 - 0.00065 19.7 0.0 0.00071 19.6 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding FAD_binding_9 PF08021.11 NODE_81167_length_195_cov_1.975000_g73226_i0forward_frame_1 - 0.16 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain LRRCT PF01463.24 NODE_81164_length_195_cov_1.987500_g73223_i0reverse_frame_1 - 0.11 13.1 0.5 0.17 12.5 0.5 1.3 1 0 0 1 1 1 0 Leucine rich repeat C-terminal domain RPA_interact_N PF14766.6 NODE_81164_length_195_cov_1.987500_g73223_i0forward_frame_1 - 0.013 15.1 0.1 0.023 14.3 0.1 1.4 1 0 0 1 1 1 0 Replication protein A interacting N-terminal Macro_2 PF14519.6 NODE_81162_length_195_cov_1.993750_g73221_i0reverse_frame_1 - 0.085 12.2 0.2 0.084 12.2 0.2 1.0 1 0 0 1 1 1 0 Macro-like domain DUF1065 PF06358.11 NODE_81158_length_195_cov_2.000000_g73217_i0reverse_frame_1 - 0.028 14.3 0.0 0.042 13.8 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1065) PET PF06297.14 NODE_81143_length_195_cov_2.075000_g73202_i0forward_frame_1 - 0.043 14.1 0.3 0.05 13.9 0.3 1.1 1 0 0 1 1 1 0 PET Domain PRO8NT PF08082.11 NODE_81141_length_195_cov_2.106250_g73200_i0reverse_frame_1 - 0.14 12.1 0.0 0.14 12.1 0.0 1.0 1 0 0 1 1 1 0 PRO8NT (NUC069), PrP8 N-terminal domain DUF5394 PF17372.2 NODE_81120_length_195_cov_2.343750_g73179_i0reverse_frame_1 - 0.095 12.2 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5394) CxC1 PF18802.1 NODE_81114_length_195_cov_2.450000_g73173_i0forward_frame_1 - 0.16 12.1 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases Jun PF03957.13 NODE_81110_length_195_cov_2.531250_g73169_i0forward_frame_1 - 0.022 14.7 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Jun-like transcription factor Transpos_assoc PF13963.6 NODE_81108_length_195_cov_2.593750_g73167_i0reverse_frame_1 - 0.9 9.9 8.7 2.7 8.4 2.2 2.1 1 1 1 2 2 2 0 Transposase-associated domain NST1 PF13945.6 NODE_81105_length_195_cov_2.675000_g73164_i0reverse_frame_1 - 0.13 12.4 1.0 0.15 12.1 1.0 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator Zip PF02535.22 NODE_81105_length_195_cov_2.675000_g73164_i0forward_frame_1 - 0.048 12.9 0.1 0.051 12.8 0.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter APA3_viroporin PF11289.8 NODE_81099_length_195_cov_2.718750_g73158_i0forward_frame_1 - 0.016 14.8 5.3 0.016 14.8 5.3 1.0 1 0 0 1 1 1 0 Coronavirus accessory protein 3a DBD_Tnp_Hermes PF10683.9 NODE_81098_length_195_cov_2.737500_g73157_i0reverse_frame_1 - 0.17 11.5 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 Hermes transposase DNA-binding domain DUF5520 PF17658.1 NODE_81098_length_195_cov_2.737500_g73157_i0forward_frame_1 - 0.083 12.0 0.2 0.084 12.0 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5520) Trp_Tyr_perm PF03222.13 NODE_81091_length_195_cov_3.081250_g73150_i0reverse_frame_1 - 0.018 14.1 0.6 0.018 14.1 0.6 1.0 1 0 0 1 1 1 0 Tryptophan/tyrosine permease family RCDG1 PF15725.5 NODE_81084_length_195_cov_3.387500_g73143_i0reverse_frame_1 - 0.034 14.6 2.2 0.039 14.4 2.2 1.2 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein DUF3089 PF11288.8 NODE_81080_length_195_cov_3.975000_g73139_i0forward_frame_1 - 0.013 15.1 0.2 0.014 14.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) Cys_rich_FGFR PF00839.17 NODE_81077_length_195_cov_4.318750_g73136_i0reverse_frame_1 - 0.066 13.4 0.3 0.077 13.2 0.3 1.2 1 0 0 1 1 1 0 Cysteine rich repeat Prokineticin PF06607.11 NODE_81076_length_195_cov_5.837500_g73135_i0reverse_frame_1 - 0.024 14.9 0.8 0.028 14.7 0.8 1.1 1 0 0 1 1 1 0 Prokineticin DUF2706 PF10913.8 NODE_81076_length_195_cov_5.837500_g73135_i0reverse_frame_1 - 0.13 12.1 0.3 0.31 10.9 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2706) CybS PF05328.12 NODE_81074_length_195_cov_7.212500_g73133_i0reverse_frame_1 - 0.2 11.4 5.7 0.23 11.2 5.7 1.3 1 0 0 1 1 1 0 CybS, succinate dehydrogenase cytochrome B small subunit DUF5423 PF17461.2 NODE_81073_length_195_cov_9.500000_g73132_i0reverse_frame_1 - 0.43 9.4 3.3 0.45 9.3 3.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5423) DHHC PF01529.20 NODE_81073_length_195_cov_9.500000_g73132_i0forward_frame_1 - 0.99 9.5 7.6 1.4 9.0 7.6 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase Sid-5 PF17204.3 NODE_81073_length_195_cov_9.500000_g73132_i0forward_frame_1 - 3.1 8.0 9.6 4.7 7.5 9.6 1.4 1 1 0 1 1 1 0 Sid-5 family DUF1589 PF07628.11 NODE_81069_length_195_cov_15.393750_g73128_i0forward_frame_1 - 0.023 14.8 0.1 0.027 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1589) SdpA PF17418.2 NODE_81069_length_195_cov_15.393750_g73128_i0forward_frame_1 - 0.11 12.4 0.0 0.13 12.2 0.0 1.0 1 0 0 1 1 1 0 Sporulation delaying protein SdpA PSI_integrin PF17205.3 NODE_81059_length_195_cov_30.662500_g73118_i0forward_frame_1 - 0.0036 17.0 2.7 0.0037 17.0 0.2 2.0 2 0 0 2 2 2 1 Integrin plexin domain MACPF PF01823.19 NODE_81052_length_195_cov_38.037500_g73111_i0reverse_frame_1 - 0.052 13.6 4.3 0.056 13.5 4.3 1.0 1 0 0 1 1 1 0 MAC/Perforin domain Imm17 PF15562.6 NODE_81048_length_195_cov_40.287500_g73107_i0reverse_frame_1 - 0.14 12.1 4.3 0.19 11.6 4.3 1.2 1 0 0 1 1 1 0 Immunity protein 17 Ribosomal_L37e PF01907.19 NODE_81045_length_195_cov_42.606250_g73104_i0reverse_frame_1 - 0.017 15.2 0.4 0.028 14.6 0.4 1.4 1 0 0 1 1 1 0 Ribosomal protein L37e Rad50_zn_hook PF04423.14 NODE_81039_length_195_cov_46.268750_g73098_i0reverse_frame_1 - 0.078 12.8 0.7 0.13 12.2 0.7 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif IBR PF01485.21 NODE_81039_length_195_cov_46.268750_g73098_i0reverse_frame_1 - 0.084 13.1 7.3 0.11 12.8 6.6 1.6 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain RE_Eco29kI PF09517.10 NODE_81038_length_195_cov_46.918750_g73097_i0reverse_frame_1 - 0.16 11.6 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Eco29kI restriction endonuclease YjbR PF04237.13 NODE_81038_length_195_cov_46.918750_g73097_i0forward_frame_1 - 0.14 12.7 0.0 0.15 12.6 0.0 1.1 1 0 0 1 1 1 0 YjbR # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks417.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks417.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks417.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks417.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ICAM_N PF03921.14 NODE_81036_length_195_cov_49.537500_g73095_i0forward_frame_1 - 0.037 13.7 0.1 0.046 13.4 0.0 1.3 1 1 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain XRN1_D1 PF18332.1 NODE_81034_length_195_cov_54.393750_g73093_i0reverse_frame_1 - 0.053 13.3 0.0 0.053 13.3 0.0 1.0 1 0 0 1 1 1 0 Exoribonuclease Xrn1 D1 domain Hormone_4 PF00220.17 NODE_81031_length_195_cov_56.081250_g73090_i0reverse_frame_1 - 5.5 7.2 7.2 0.9 9.7 1.6 2.1 2 0 0 2 2 2 0 Neurohypophysial hormones, N-terminal Domain zinc_ribbon_9 PF14369.6 NODE_81026_length_195_cov_60.006250_g73085_i0reverse_frame_1 - 0.22 11.8 4.3 1.6 9.0 0.2 2.4 3 0 0 3 3 3 0 zinc-ribbon C1_2 PF03107.16 NODE_81026_length_195_cov_60.006250_g73085_i0reverse_frame_1 - 0.65 10.4 5.1 3.8 7.9 5.1 2.0 1 1 0 1 1 1 0 C1 domain MukF_C PF17193.4 NODE_81025_length_195_cov_61.112500_g73084_i0reverse_frame_1 - 0.057 13.6 0.0 0.072 13.2 0.0 1.3 1 1 0 1 1 1 0 MukF C-terminal domain Rubredoxin_2 PF18073.1 NODE_81024_length_195_cov_62.168750_g73083_i0forward_frame_1 - 0.061 13.1 1.1 0.061 13.1 1.1 1.5 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-B_box PF00643.24 NODE_81022_length_195_cov_63.118750_g73081_i0reverse_frame_1 - 1.9 8.7 8.6 0.66 10.2 2.1 2.1 2 0 0 2 2 2 0 B-box zinc finger zf-RING_UBOX PF13445.6 NODE_81016_length_195_cov_79.018750_g73075_i0reverse_frame_1 - 0.57 10.3 4.3 0.35 10.9 1.9 1.8 2 0 0 2 2 2 0 RING-type zinc-finger Peptidase_C107 PF17222.3 NODE_81015_length_195_cov_79.287500_g73074_i0reverse_frame_1 - 0.13 11.2 0.2 0.14 11.1 0.2 1.0 1 0 0 1 1 1 0 Viral cysteine endopeptidase C107 DUF1666 PF07891.12 NODE_81010_length_195_cov_94.825000_g73069_i0reverse_frame_1 - 0.024 14.3 0.3 0.027 14.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1666) DUF4037 PF13228.6 NODE_81001_length_195_cov_131.075000_g73060_i0reverse_frame_1 - 0.067 14.0 0.1 0.077 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4037) zf-LITAF-like PF10601.9 NODE_80997_length_195_cov_187.006250_g73056_i0forward_frame_1 - 0.077 13.3 5.1 0.094 13.0 5.1 1.3 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain RLI PF04068.15 NODE_80996_length_195_cov_201.487500_g73055_i0reverse_frame_1 - 0.094 12.6 1.7 0.52 10.2 0.0 2.1 1 1 1 2 2 2 0 Possible Fer4-like domain in RNase L inhibitor, RLI DUF1685 PF07939.11 NODE_80993_length_195_cov_261.968750_g73052_i0reverse_frame_1 - 0.16 11.7 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1685) DUF2944 PF11161.8 NODE_80980_length_196_cov_0.906832_g73039_i0forward_frame_2 - 0.13 12.2 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) DUF1922 PF09082.10 NODE_80979_length_196_cov_0.913043_g73038_i0reverse_frame_3 - 0.099 12.9 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1922) zf-CCHC_2 PF13696.6 NODE_80978_length_196_cov_0.925466_g73037_i0forward_frame_3 - 0.015 15.1 0.3 0.026 14.3 0.3 1.5 1 0 0 1 1 1 0 Zinc knuckle PAM2 PF07145.15 NODE_80976_length_196_cov_0.931677_g73035_i0reverse_frame_3 - 0.019 14.6 1.4 0.31 10.8 0.2 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region Presenilin PF01080.17 NODE_80973_length_196_cov_0.962733_g73032_i0reverse_frame_2 - 7.6 5.2 7.1 7.6 5.2 7.1 1.0 1 0 0 1 1 1 0 Presenilin Miga PF10265.9 NODE_80973_length_196_cov_0.962733_g73032_i0reverse_frame_2 - 8.1 5.3 13.0 8 5.3 13.0 1.0 1 0 0 1 1 1 0 Mitoguardin APOBEC3 PF18771.1 NODE_80973_length_196_cov_0.962733_g73032_i0forward_frame_3 - 0.24 11.5 1.3 0.27 11.4 1.3 1.1 1 0 0 1 1 1 0 APOBEC3 ACP_syn_III_C PF08541.10 NODE_80972_length_196_cov_0.962733_g73031_i0reverse_frame_3 - 0.024 14.8 0.0 0.027 14.6 0.0 1.2 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GWT1 PF06423.12 NODE_80971_length_196_cov_0.975155_g73030_i0forward_frame_2 - 1.8 8.7 5.7 2.2 8.4 5.7 1.1 1 0 0 1 1 1 0 GWT1 RINGv PF12906.7 NODE_80970_length_196_cov_0.981366_g73029_i0forward_frame_3 - 0.32 11.1 2.4 0.59 10.3 0.4 2.3 1 1 1 2 2 2 0 RING-variant domain Transglut_C PF00927.22 NODE_80969_length_196_cov_0.981366_g73028_i0forward_frame_3 - 0.022 14.9 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 Transglutaminase family, C-terminal ig like domain TackOD1 PF18551.1 NODE_80963_length_196_cov_0.987578_g73022_i0reverse_frame_3 - 0.097 12.3 2.7 0.1 12.3 2.7 1.0 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 Imm_superinfect PF14373.6 NODE_80958_length_196_cov_0.987578_g73017_i0forward_frame_3 - 0.05 13.5 0.2 0.073 13.0 0.2 1.2 1 0 0 1 1 1 0 Superinfection immunity protein DUF3270 PF11674.8 NODE_80957_length_196_cov_0.987578_g73016_i0reverse_frame_3 - 0.88 9.8 7.2 0.96 9.7 7.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) SVM_signal PF12113.8 NODE_80957_length_196_cov_0.987578_g73016_i0reverse_frame_3 - 3.5 7.6 5.3 24 4.9 0.3 2.2 2 0 0 2 2 2 0 SVM protein signal sequence Mito_fiss_reg PF05308.11 NODE_80949_length_196_cov_0.987578_g73008_i0reverse_frame_2 - 1.5 8.8 7.2 1.6 8.7 7.2 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator VIR_N PF15912.5 NODE_80949_length_196_cov_0.987578_g73008_i0reverse_frame_2 - 4.1 6.9 9.0 4.7 6.7 9.0 1.0 1 0 0 1 1 1 0 Virilizer, N-terminal DUF1360 PF07098.11 NODE_80949_length_196_cov_0.987578_g73008_i0forward_frame_3 - 0.16 12.0 5.8 0.18 11.8 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) Ac81 PF05820.11 NODE_80947_length_196_cov_0.993789_g73006_i0forward_frame_3 - 0.034 13.7 0.1 0.034 13.7 0.1 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 hDGE_amylase PF14701.6 NODE_80943_length_196_cov_0.993789_g73002_i0forward_frame_3 - 4.7e-20 72.1 0.4 3.7e-19 69.2 0.0 1.9 1 1 1 2 2 2 2 Glycogen debranching enzyme, glucanotransferase domain Chalcone_N PF18232.1 NODE_80941_length_196_cov_0.993789_g73000_i0forward_frame_3 - 0.093 13.1 0.5 0.12 12.8 0.5 1.2 1 0 0 1 1 1 0 Chalcone isomerase N-terminal domain Sugar_tr PF00083.24 NODE_80940_length_196_cov_0.993789_g72999_i0forward_frame_3 - 0.0003 19.8 4.4 0.0003 19.8 4.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_80940_length_196_cov_0.993789_g72999_i0forward_frame_3 - 0.00032 19.7 5.4 0.00033 19.7 5.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1945 PF09178.10 NODE_80940_length_196_cov_0.993789_g72999_i0forward_frame_2 - 0.022 14.9 2.4 0.047 13.9 2.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1945) Syndecan PF01034.20 NODE_80938_length_196_cov_0.993789_g72997_i0reverse_frame_3 - 0.072 13.0 0.4 0.31 11.0 0.0 1.9 2 0 0 2 2 2 0 Syndecan domain F1F0-ATPsyn_F PF10791.9 NODE_80938_length_196_cov_0.993789_g72997_i0reverse_frame_2 - 0.1 13.0 0.2 0.14 12.6 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial F1-F0 ATP synthase subunit F of fungi UBZ_FAAP20 PF15750.5 NODE_80934_length_196_cov_0.993789_g72993_i0reverse_frame_2 - 0.11 12.5 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin-binding zinc-finger PRESAN PF09687.10 NODE_80933_length_196_cov_0.993789_g72992_i0forward_frame_3 - 0.0074 16.8 0.6 0.0083 16.7 0.6 1.2 1 0 0 1 1 1 1 Plasmodium RESA N-terminal DUF3297 PF11730.8 NODE_80931_length_196_cov_0.993789_g72990_i0forward_frame_3 - 0.18 11.7 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3297) HJURP_mid PF12346.8 NODE_80930_length_196_cov_0.993789_g72989_i0reverse_frame_2 - 0.02 15.3 4.5 0.024 15.1 4.5 1.0 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat SR-25 PF10500.9 NODE_80930_length_196_cov_0.993789_g72989_i0forward_frame_3 - 0.48 10.0 8.9 0.48 10.0 8.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RSRP PF17069.5 NODE_80930_length_196_cov_0.993789_g72989_i0forward_frame_3 - 1.8 8.1 12.8 1.8 8.1 12.8 1.0 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Syntaphilin PF15290.6 NODE_80930_length_196_cov_0.993789_g72989_i0forward_frame_3 - 4 7.0 6.3 4.3 6.9 6.3 1.2 1 0 0 1 1 1 0 Golgi-localised syntaxin-1-binding clamp Toxin_12 PF07740.12 NODE_80929_length_196_cov_0.993789_g72988_i0forward_frame_3 - 0.93 10.2 10.8 0.95 10.2 1.5 2.3 2 1 0 2 2 2 0 Ion channel inhibitory toxin Gon7 PF08738.10 NODE_80922_length_196_cov_0.993789_g72981_i0reverse_frame_3 - 0.071 13.2 0.0 0.074 13.1 0.0 1.2 1 0 0 1 1 1 0 Gon7 family PDZ_4 PF17816.1 NODE_80922_length_196_cov_0.993789_g72981_i0reverse_frame_3 - 0.14 12.6 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 PDZ domain PAN_3 PF08277.12 NODE_80919_length_196_cov_0.993789_g72978_i0reverse_frame_3 - 0.35 10.7 5.9 0.51 10.2 5.9 1.4 1 1 0 1 1 1 0 PAN-like domain UPF0506 PF11703.8 NODE_80919_length_196_cov_0.993789_g72978_i0reverse_frame_3 - 1.4 9.3 12.2 2.3 8.7 12.2 1.5 1 1 0 1 1 1 0 UPF0506 PPR_2 PF13041.6 NODE_80917_length_196_cov_0.993789_g72976_i0forward_frame_3 - 0.031 14.5 0.0 0.039 14.1 0.0 1.1 1 0 0 1 1 1 0 PPR repeat family PrpR_N PF06506.11 NODE_80914_length_196_cov_1.024845_g72973_i0forward_frame_3 - 0.23 11.0 0.0 0.28 10.7 0.0 1.0 1 0 0 1 1 1 0 Propionate catabolism activator GPS PF01825.21 NODE_80907_length_196_cov_1.049689_g72966_i0forward_frame_2 - 9.1e-07 29.3 0.1 1.4e-06 28.7 0.1 1.3 1 0 0 1 1 1 1 GPCR proteolysis site, GPS, motif CD52 PF15116.6 NODE_80905_length_196_cov_1.062112_g72964_i0reverse_frame_3 - 0.045 13.8 0.6 0.07 13.2 0.6 1.4 1 0 0 1 1 1 0 CAMPATH-1 antigen Tra_M PF05261.11 NODE_80897_length_196_cov_1.086957_g72956_i0reverse_frame_3 - 0.0014 18.6 0.5 0.0014 18.6 0.5 1.1 1 0 0 1 1 1 1 TraM protein, DNA-binding OST-HTH PF12872.7 NODE_80896_length_196_cov_1.086957_g72955_i0reverse_frame_2 - 0.073 12.9 0.1 0.086 12.7 0.1 1.2 1 0 0 1 1 1 0 OST-HTH/LOTUS domain HTH_51 PF18558.1 NODE_80886_length_196_cov_1.142857_g72945_i0forward_frame_3 - 0.17 11.8 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain Patatin PF01734.22 NODE_80885_length_196_cov_1.149068_g72944_i0reverse_frame_2 - 0.084 13.0 0.0 0.084 13.0 0.0 1.1 1 0 0 1 1 1 0 Patatin-like phospholipase ParBc PF02195.18 NODE_80884_length_196_cov_1.149068_g72943_i0reverse_frame_2 - 0.011 16.0 0.0 0.022 15.0 0.0 1.6 1 1 0 1 1 1 0 ParB-like nuclease domain Glyco_hydro_3_C PF01915.22 NODE_80883_length_196_cov_1.155280_g72942_i0reverse_frame_2 - 0.092 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain Chromosome_seg PF13889.6 NODE_80882_length_196_cov_1.161491_g72941_i0forward_frame_3 - 0.014 15.6 1.9 0.023 14.9 1.9 1.3 1 0 0 1 1 1 0 Chromosome segregation during meiosis Equine_IAV_S2 PF06502.11 NODE_80879_length_196_cov_1.167702_g72938_i0reverse_frame_3 - 0.44 10.7 1.7 0.61 10.2 1.7 1.2 1 0 0 1 1 1 0 Equine infectious anaemia virus S2 protein Lzipper-MIP1 PF14389.6 NODE_80879_length_196_cov_1.167702_g72938_i0reverse_frame_2 - 0.13 12.6 0.2 0.16 12.3 0.2 1.1 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 DUF3136 PF11334.8 NODE_80877_length_196_cov_1.167702_g72936_i0reverse_frame_3 - 0.05 13.4 0.3 0.063 13.1 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) Asp PF00026.23 NODE_80877_length_196_cov_1.167702_g72936_i0forward_frame_2 - 0.058 12.8 0.0 0.061 12.7 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic aspartyl protease T-box PF00907.22 NODE_80875_length_196_cov_1.173913_g72934_i0reverse_frame_3 - 0.23 11.7 0.0 0.34 11.2 0.0 1.2 1 0 0 1 1 1 0 T-box BRO1 PF03097.18 NODE_80875_length_196_cov_1.173913_g72934_i0reverse_frame_3 - 0.27 10.0 0.0 0.29 9.9 0.0 1.0 1 0 0 1 1 1 0 BRO1-like domain DUF4435 PF14491.6 NODE_80874_length_196_cov_1.180124_g72933_i0reverse_frame_2 - 0.069 13.0 0.6 0.081 12.8 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4435) MCM PF00493.23 NODE_80864_length_196_cov_1.204969_g72923_i0reverse_frame_3 - 0.19 10.8 0.0 0.2 10.7 0.0 1.1 1 0 0 1 1 1 0 MCM P-loop domain Rdx PF10262.9 NODE_80863_length_196_cov_1.211180_g72922_i0forward_frame_2 - 0.21 11.8 0.6 0.22 11.7 0.6 1.2 1 1 0 1 1 1 0 Rdx family DUF202 PF02656.15 NODE_80862_length_196_cov_1.217391_g72921_i0reverse_frame_2 - 0.061 13.8 0.1 0.064 13.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF202) YbgS PF13985.6 NODE_80861_length_196_cov_1.217391_g72920_i0reverse_frame_3 - 0.011 16.0 2.8 0.013 15.7 2.8 1.0 1 0 0 1 1 1 0 YbgS-like protein IATP PF04568.12 NODE_80861_length_196_cov_1.217391_g72920_i0reverse_frame_3 - 0.056 13.9 3.6 0.061 13.8 3.6 1.1 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP CxxCxxCC PF03692.15 NODE_80860_length_196_cov_1.217391_g72919_i0reverse_frame_2 - 0.092 13.5 0.1 0.11 13.2 0.1 1.3 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain DUF2087 PF09860.9 NODE_80856_length_196_cov_1.236025_g72915_i0reverse_frame_2 - 0.074 13.2 0.0 0.08 13.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) OTT_1508_deam PF14441.6 NODE_80854_length_196_cov_1.242236_g72913_i0forward_frame_2 - 0.079 13.0 1.8 0.13 12.3 1.8 1.4 1 1 0 1 1 1 0 OTT_1508-like deaminase DNA_processg_A PF02481.15 NODE_80851_length_196_cov_1.242236_g72910_i0reverse_frame_2 - 0.027 13.7 0.0 0.027 13.7 0.0 1.1 1 0 0 1 1 1 0 DNA recombination-mediator protein A DUF982 PF06169.12 NODE_80851_length_196_cov_1.242236_g72910_i0forward_frame_3 - 0.12 12.4 3.2 0.17 12.0 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF982) Hus1 PF04005.12 NODE_80850_length_196_cov_1.242236_g72909_i0forward_frame_3 - 0.056 12.6 0.0 0.058 12.5 0.0 1.0 1 0 0 1 1 1 0 Hus1-like protein PriCT_1 PF08708.11 NODE_80849_length_196_cov_1.242236_g72908_i0reverse_frame_3 - 0.051 13.3 0.1 0.057 13.2 0.1 1.1 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) DUF1510 PF07423.11 NODE_80848_length_196_cov_1.248447_g72907_i0forward_frame_2 - 0.077 13.1 0.0 0.099 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1510) Agouti PF05039.12 NODE_80847_length_196_cov_1.260870_g72906_i0reverse_frame_3 - 2.3 9.0 7.5 2.5 8.9 1.8 2.0 1 1 1 2 2 2 0 Agouti protein HPD PF05044.12 NODE_80847_length_196_cov_1.260870_g72906_i0forward_frame_2 - 0.08 12.8 0.1 0.099 12.5 0.1 1.1 1 0 0 1 1 1 0 Homeo-prospero domain ABA_GPCR PF12430.8 NODE_80842_length_196_cov_1.291925_g72901_i0reverse_frame_3 - 0.017 14.9 0.0 0.02 14.7 0.0 1.0 1 0 0 1 1 1 0 Abscisic acid G-protein coupled receptor DUF2183 PF09949.9 NODE_80842_length_196_cov_1.291925_g72901_i0reverse_frame_3 - 0.025 14.9 0.1 0.028 14.8 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2183) Peptidase_C8 PF03569.13 NODE_80841_length_196_cov_1.298137_g72900_i0forward_frame_2 - 0.013 15.1 0.1 0.014 15.0 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C8 Thioredoxin PF00085.20 NODE_80837_length_196_cov_1.310559_g72896_i0forward_frame_3 - 5.4e-06 26.3 0.0 6.3e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 NODE_80837_length_196_cov_1.310559_g72896_i0forward_frame_3 - 0.0025 18.2 0.0 0.0032 17.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain Microcin PF03526.13 NODE_80835_length_196_cov_1.322981_g72894_i0reverse_frame_3 - 0.0017 18.1 2.0 0.0024 17.6 1.8 1.4 1 1 0 1 1 1 1 Colicin E1 (microcin) immunity protein FF PF01846.19 NODE_80835_length_196_cov_1.322981_g72894_i0forward_frame_3 - 0.034 14.3 0.1 0.04 14.1 0.1 1.1 1 0 0 1 1 1 0 FF domain UL42 PF17638.2 NODE_80831_length_196_cov_1.341615_g72890_i0reverse_frame_3 - 0.0024 17.8 1.8 0.0027 17.7 1.8 1.0 1 0 0 1 1 1 1 HCMV UL42 MIT_C PF16565.5 NODE_80830_length_196_cov_1.347826_g72889_i0reverse_frame_2 - 0.011 15.7 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT cNMP_binding PF00027.29 NODE_80830_length_196_cov_1.347826_g72889_i0reverse_frame_2 - 0.05 13.7 0.0 0.058 13.5 0.0 1.2 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Beta_helix_2 PF18835.1 NODE_80830_length_196_cov_1.347826_g72889_i0forward_frame_3 - 0.12 12.1 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Beta helix repeat of Inulin fructotransferase CobU PF02283.16 NODE_80826_length_196_cov_1.378882_g72885_i0reverse_frame_2 - 0.018 14.7 0.2 0.021 14.4 0.2 1.1 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase SNARE PF05739.19 NODE_80826_length_196_cov_1.378882_g72885_i0reverse_frame_2 - 0.079 13.0 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 SNARE domain MscL PF01741.18 NODE_80825_length_196_cov_1.378882_g72884_i0reverse_frame_3 - 0.0059 16.9 0.2 0.0061 16.8 0.2 1.1 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL Ion_trans PF00520.31 NODE_80825_length_196_cov_1.378882_g72884_i0reverse_frame_3 - 0.013 14.7 0.5 0.013 14.7 0.5 1.1 1 0 0 1 1 1 0 Ion transport protein DUF2177 PF09945.9 NODE_80825_length_196_cov_1.378882_g72884_i0reverse_frame_3 - 0.049 13.7 0.2 0.051 13.7 0.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2177) Saf_2TM PF18303.1 NODE_80825_length_196_cov_1.378882_g72884_i0reverse_frame_3 - 0.082 12.5 0.4 0.094 12.3 0.4 1.1 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain CAP160 PF07918.11 NODE_80824_length_196_cov_1.391304_g72883_i0reverse_frame_2 - 0.19 11.5 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 CAP160 repeat DUF1892 PF08987.10 NODE_80822_length_196_cov_1.397516_g72881_i0forward_frame_2 - 0.069 13.3 0.1 0.074 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1892) MAPKK1_Int PF08923.10 NODE_80818_length_196_cov_1.416149_g72877_i0forward_frame_3 - 0.051 13.4 0.1 0.051 13.4 0.1 1.1 1 0 0 1 1 1 0 Mitogen-activated protein kinase kinase 1 interacting NAR2 PF16974.5 NODE_80816_length_196_cov_1.428571_g72875_i0reverse_frame_2 - 0.04 13.3 0.0 0.044 13.2 0.0 1.0 1 0 0 1 1 1 0 High-affinity nitrate transporter accessory SirA PF10747.9 NODE_80814_length_196_cov_1.440994_g72873_i0forward_frame_3 - 0.064 13.6 0.6 0.071 13.4 0.6 1.0 1 0 0 1 1 1 0 Sporulation inhibitor of replication protein SirA Flavi_capsid PF01003.19 NODE_80813_length_196_cov_1.440994_g72872_i0forward_frame_2 - 0.14 12.0 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Flavivirus capsid protein C KOG2701 PF09762.9 NODE_80810_length_196_cov_1.447205_g72869_i0reverse_frame_3 - 0.052 13.8 0.0 0.056 13.7 0.0 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein (DUF2037) Kp4 PF09044.10 NODE_80810_length_196_cov_1.447205_g72869_i0forward_frame_2 - 0.068 13.2 0.1 0.078 13.1 0.1 1.1 1 0 0 1 1 1 0 Kp4 MipZ PF09140.11 NODE_80810_length_196_cov_1.447205_g72869_i0forward_frame_2 - 0.095 12.0 0.0 0.095 12.0 0.0 1.0 1 0 0 1 1 1 0 ATPase MipZ RecQ_Zn_bind PF16124.5 NODE_80807_length_196_cov_1.453416_g72866_i0forward_frame_3 - 0.068 13.9 1.9 0.076 13.7 1.9 1.1 1 0 0 1 1 1 0 RecQ zinc-binding GATase_7 PF13537.6 NODE_80803_length_196_cov_1.459627_g72862_i0reverse_frame_3 - 3.1e-05 23.9 0.0 3.2e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 NODE_80803_length_196_cov_1.459627_g72862_i0reverse_frame_3 - 0.015 15.5 0.0 0.017 15.3 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferase domain GYF_2 PF14237.6 NODE_80802_length_196_cov_1.465839_g72861_i0reverse_frame_3 - 0.043 13.6 0.0 0.069 13.0 0.0 1.3 1 0 0 1 1 1 0 GYF domain 2 ATX_III PF08098.11 NODE_80801_length_196_cov_1.472050_g72860_i0reverse_frame_2 - 6.9 6.8 20.3 0.11 12.6 7.4 2.8 3 0 0 3 3 3 0 Anemonia sulcata toxin III family TruB_C_2 PF16198.5 NODE_80796_length_196_cov_1.478261_g72855_i0forward_frame_2 - 0.087 13.0 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 tRNA pseudouridylate synthase B C-terminal domain TetR_C_31 PF17940.1 NODE_80795_length_196_cov_1.478261_g72854_i0forward_frame_2 - 0.033 14.4 4.2 0.037 14.2 4.2 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain RRM_3 PF08777.11 NODE_80795_length_196_cov_1.478261_g72854_i0forward_frame_2 - 0.097 12.7 1.1 0.11 12.5 1.1 1.0 1 0 0 1 1 1 0 RNA binding motif DAO PF01266.24 NODE_80791_length_196_cov_1.484472_g72850_i0forward_frame_3 - 0.022 14.4 0.0 0.022 14.4 0.0 1.0 1 0 0 1 1 1 0 FAD dependent oxidoreductase mRNA_decap_C PF16741.5 NODE_80784_length_196_cov_1.484472_g72843_i0reverse_frame_3 - 0.0091 15.3 0.2 0.025 13.9 0.0 1.7 2 0 0 2 2 2 1 mRNA-decapping enzyme C-terminus DUF285 PF03382.14 NODE_80784_length_196_cov_1.484472_g72843_i0reverse_frame_3 - 0.075 12.8 0.0 0.098 12.4 0.0 1.2 1 1 0 1 1 1 0 Mycoplasma protein of unknown function, DUF285 Tnp_DNA_bind PF14706.6 NODE_80782_length_196_cov_1.484472_g72841_i0forward_frame_2 - 0.12 12.2 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Transposase DNA-binding Acylphosphatase PF00708.18 NODE_80781_length_196_cov_1.484472_g72840_i0forward_frame_2 - 1.7e-09 38.0 0.0 1.9e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Acylphosphatase RNA_pol_Rpb2_1 PF04563.15 NODE_80778_length_196_cov_1.490683_g72837_i0forward_frame_3 - 0.13 11.7 0.0 0.15 11.5 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase beta subunit DUF1955 PF09205.10 NODE_80777_length_196_cov_1.490683_g72836_i0forward_frame_3 - 0.076 12.8 0.0 0.079 12.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) PDEase_I PF00233.19 NODE_80775_length_196_cov_1.490683_g72834_i0forward_frame_2 - 0.0014 18.4 0.0 0.0018 18.1 0.0 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase DUF423 PF04241.15 NODE_80774_length_196_cov_1.490683_g72833_i0forward_frame_3 - 0.078 13.2 0.0 0.079 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF423) Tme5_EGF_like PF09064.10 NODE_80772_length_196_cov_1.490683_g72831_i0forward_frame_2 - 2.6 8.0 9.1 0.7 9.8 4.8 2.0 2 0 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like Pterin_bind PF00809.22 NODE_80769_length_196_cov_1.490683_g72828_i0reverse_frame_3 - 0.00084 19.1 1.2 0.085 12.5 0.1 2.0 1 1 1 2 2 2 2 Pterin binding enzyme Babuvirus_MP PF07234.11 NODE_80766_length_196_cov_1.490683_g72825_i0reverse_frame_2 - 1 9.6 3.6 1 9.5 3.5 1.2 1 1 0 1 1 1 0 Movement and RNA silencing protein Ins_beta PF03488.14 NODE_80762_length_196_cov_1.490683_g72821_i0reverse_frame_3 - 0.046 13.8 1.0 0.046 13.8 1.0 1.6 1 1 0 1 1 1 0 Nematode insulin-related peptide beta type DUF4907 PF16250.5 NODE_80755_length_196_cov_1.521739_g72814_i0reverse_frame_2 - 0.12 12.2 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4907) Draxin PF15550.6 NODE_80752_length_196_cov_1.534161_g72811_i0reverse_frame_3 - 0.094 12.6 1.0 0.1 12.5 1.0 1.1 1 0 0 1 1 1 0 Draxin ABC_tran PF00005.27 NODE_80751_length_196_cov_1.540373_g72810_i0reverse_frame_2 - 0.044 14.3 0.0 0.056 14.0 0.0 1.1 1 0 0 1 1 1 0 ABC transporter Macoilin PF09726.9 NODE_80748_length_196_cov_1.559006_g72807_i0reverse_frame_3 - 0.045 12.3 0.8 0.048 12.2 0.8 1.0 1 0 0 1 1 1 0 Macoilin family YidD PF01809.18 NODE_80747_length_196_cov_1.559006_g72806_i0forward_frame_2 - 0.057 13.3 0.2 0.078 12.9 0.2 1.2 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor DUF4687 PF15747.5 NODE_80741_length_196_cov_1.602484_g72800_i0reverse_frame_2 - 0.027 15.0 1.2 0.029 14.9 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4687) zf-Tim10_DDP PF02953.15 NODE_80740_length_196_cov_1.602484_g72799_i0reverse_frame_2 - 0.012 15.2 0.3 0.014 15.0 0.3 1.2 1 0 0 1 1 1 0 Tim10/DDP family zinc finger Herpes_UL92 PF03048.14 NODE_80733_length_196_cov_1.621118_g72792_i0reverse_frame_2 - 0.08 12.7 0.9 0.085 12.6 0.9 1.0 1 0 0 1 1 1 0 UL92 family DUF1428 PF07237.11 NODE_80727_length_196_cov_1.645963_g72786_i0reverse_frame_3 - 0.17 12.1 0.0 0.19 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1428) UCH PF00443.29 NODE_80727_length_196_cov_1.645963_g72786_i0forward_frame_3 - 0.029 13.8 0.0 0.029 13.8 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Oxidored_q4 PF00507.19 NODE_80725_length_196_cov_1.658385_g72784_i0reverse_frame_3 - 0.0015 18.6 0.9 0.0044 17.1 0.1 1.8 1 1 1 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LapA_dom PF06305.11 NODE_80725_length_196_cov_1.658385_g72784_i0reverse_frame_3 - 0.012 15.5 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain YrvL PF14184.6 NODE_80725_length_196_cov_1.658385_g72784_i0reverse_frame_3 - 0.023 14.8 0.1 0.025 14.7 0.1 1.0 1 0 0 1 1 1 0 Regulatory protein YrvL Imm12 PF15560.6 NODE_80723_length_196_cov_1.677019_g72782_i0forward_frame_2 - 0.032 14.2 0.2 0.035 14.1 0.2 1.0 1 0 0 1 1 1 0 Immunity protein 12 TT_ORF1 PF02956.14 NODE_80716_length_196_cov_1.726708_g72775_i0reverse_frame_2 - 8.6 4.9 6.8 7.4 5.1 6.8 1.0 1 0 0 1 1 1 0 TT viral orf 1 Acetyltransf_15 PF17013.5 NODE_80715_length_196_cov_1.726708_g72774_i0reverse_frame_2 - 0.39 10.1 3.9 0.41 10.1 3.9 1.0 1 0 0 1 1 1 0 Putative acetyl-transferase WD40 PF00400.32 NODE_80714_length_196_cov_1.732919_g72773_i0forward_frame_2 - 1.9e-08 34.8 0.0 4.2e-06 27.4 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_80714_length_196_cov_1.732919_g72773_i0forward_frame_2 - 0.005 17.1 0.0 0.02 15.2 0.0 1.8 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 NODE_80714_length_196_cov_1.732919_g72773_i0forward_frame_2 - 0.008 14.9 0.0 0.008 14.9 0.0 1.0 1 0 0 1 1 1 1 Nucleoporin Nup120/160 Bac_DnaA PF00308.18 NODE_80711_length_196_cov_1.732919_g72770_i0forward_frame_3 - 1.2e-11 44.9 0.1 1.3e-11 44.8 0.1 1.0 1 0 0 1 1 1 1 Bacterial dnaA protein O-ag_pol_Wzy PF14296.6 NODE_80706_length_196_cov_1.739130_g72765_i0forward_frame_2 - 3.9 6.0 14.8 4.3 5.9 14.8 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy DUF892 PF05974.12 NODE_80701_length_196_cov_1.776398_g72760_i0reverse_frame_3 - 1.5e-15 57.6 1.8 1.6e-15 57.5 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) CLLAC PF15675.5 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_3 - 0.073 12.6 1.8 0.11 12.1 1.8 1.2 1 0 0 1 1 1 0 CLLAC-motif containing domain Uroplakin_II PF07353.12 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_3 - 0.11 12.0 0.1 0.12 11.9 0.1 1.0 1 0 0 1 1 1 0 Uroplakin II TMEM100 PF16311.5 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_2 - 0.0012 18.4 2.7 0.0014 18.2 2.7 1.0 1 0 0 1 1 1 1 Transmembrane protein 100 UPF0542 PF15086.6 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_2 - 0.031 14.2 1.0 0.045 13.7 1.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 EVC2_like PF12297.8 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_2 - 0.18 10.4 0.2 0.19 10.4 0.2 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein LapA_dom PF06305.11 NODE_80698_length_196_cov_1.801242_g72757_i0reverse_frame_2 - 0.29 11.0 2.8 0.5 10.2 2.8 1.4 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF4094 PF13334.6 NODE_80698_length_196_cov_1.801242_g72757_i0forward_frame_3 - 0.096 13.1 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) CcmH PF03918.14 NODE_80698_length_196_cov_1.801242_g72757_i0forward_frame_2 - 0.11 11.8 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein Lep_receptor_Ig PF06328.11 NODE_80695_length_196_cov_1.826087_g72754_i0reverse_frame_3 - 0.057 13.4 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain Pkinase_Tyr PF07714.17 NODE_80694_length_196_cov_1.826087_g72753_i0forward_frame_3 - 1.7e-06 27.5 0.0 1.8e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_80694_length_196_cov_1.826087_g72753_i0forward_frame_3 - 3.7e-06 26.5 0.0 3.8e-06 26.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 NODE_80694_length_196_cov_1.826087_g72753_i0forward_frame_3 - 0.00066 19.1 0.0 0.00066 19.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Usher PF00577.20 NODE_80692_length_196_cov_1.850932_g72751_i0reverse_frame_2 - 1.3e-06 27.6 4.1 1.6e-06 27.3 4.1 1.2 1 0 0 1 1 1 1 Outer membrane usher protein Polysacc_deac_2 PF04748.13 NODE_80690_length_196_cov_1.863354_g72749_i0forward_frame_3 - 0.14 11.3 0.0 0.14 11.3 0.0 1.0 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase DUF2282 PF10048.9 NODE_80688_length_196_cov_1.869565_g72747_i0reverse_frame_2 - 0.055 13.5 0.1 0.084 12.9 0.1 1.3 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2282) Spore_III_AF PF09581.10 NODE_80686_length_196_cov_1.881988_g72745_i0reverse_frame_2 - 0.17 11.9 0.4 0.2 11.7 0.4 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) DUF1841 PF08897.11 NODE_80684_length_196_cov_1.894410_g72743_i0forward_frame_3 - 0.16 12.0 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1841) Zn_clus PF00172.18 NODE_80683_length_196_cov_1.906832_g72742_i0reverse_frame_2 - 0.039 14.1 2.0 0.052 13.7 2.0 1.2 1 0 0 1 1 1 0 Fungal Zn(2)-Cys(6) binuclear cluster domain SSL_OB PF09199.10 NODE_80680_length_196_cov_1.913043_g72739_i0forward_frame_3 - 0.037 14.3 0.0 0.041 14.2 0.0 1.1 1 0 0 1 1 1 0 Staphylococcal superantigen-like OB-fold domain DUF5538 PF17692.1 NODE_80679_length_196_cov_1.931677_g72738_i0forward_frame_3 - 0.037 14.1 0.1 0.041 13.9 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5538) SCO1-SenC PF02630.14 NODE_80675_length_196_cov_1.956522_g72734_i0reverse_frame_2 - 0.043 13.7 0.0 0.051 13.5 0.0 1.1 1 0 0 1 1 1 0 SCO1/SenC ATP-synt_ab_C PF00306.27 NODE_80673_length_196_cov_1.956522_g72732_i0reverse_frame_3 - 0.18 12.1 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta chain, C terminal domain ERGIC_N PF13850.6 NODE_80672_length_196_cov_1.962733_g72731_i0reverse_frame_3 - 0.021 15.2 0.1 0.03 14.7 0.1 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) PS-DH PF14765.6 NODE_80672_length_196_cov_1.962733_g72731_i0forward_frame_2 - 0.23 10.7 0.1 0.23 10.7 0.1 1.0 1 0 0 1 1 1 0 Polyketide synthase dehydratase Pyridoxal_deC PF00282.19 NODE_80670_length_196_cov_1.975155_g72729_i0forward_frame_3 - 0.11 11.2 0.0 0.11 11.2 0.0 1.2 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain DUF2198 PF09964.9 NODE_80667_length_196_cov_1.981366_g72726_i0reverse_frame_2 - 0.087 12.9 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2198) TGBp3 PF02495.17 NODE_80667_length_196_cov_1.981366_g72726_i0forward_frame_3 - 0.067 12.9 2.5 0.071 12.8 0.3 1.8 1 1 1 2 2 2 0 Triple gene block 3 PhoLip_ATPase_C PF16212.5 NODE_80666_length_196_cov_1.981366_g72725_i0forward_frame_3 - 4.9e-14 52.7 1.1 5.1e-14 52.6 1.1 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Atthog PF18800.1 NODE_80666_length_196_cov_1.981366_g72725_i0forward_frame_3 - 0.016 15.1 0.3 0.019 14.9 0.3 1.0 1 0 0 1 1 1 0 Attenuator of Hedgehog NatB_MDM20 PF09797.9 NODE_80663_length_196_cov_1.987578_g72722_i0reverse_frame_2 - 0.094 11.6 0.1 0.097 11.6 0.1 1.1 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit Pho88 PF10032.9 NODE_80663_length_196_cov_1.987578_g72722_i0forward_frame_3 - 0.0061 15.8 0.3 0.0078 15.5 0.3 1.0 1 0 0 1 1 1 1 Phosphate transport (Pho88) AAA_11 PF13086.6 NODE_80662_length_196_cov_1.987578_g72721_i0reverse_frame_3 - 0.078 12.8 0.7 0.078 12.8 0.7 1.0 1 0 0 1 1 1 0 AAA domain SR-25 PF10500.9 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_3 - 3 7.4 12.2 3.1 7.3 12.2 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein IMUP PF15761.5 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_3 - 3.4 8.4 9.4 4.1 8.1 9.4 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein ECSCR PF15820.5 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_2 - 0.09 12.6 0.1 0.098 12.5 0.1 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator EphA2_TM PF14575.6 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_2 - 0.093 13.6 0.1 0.1 13.5 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain TMEM154 PF15102.6 NODE_80660_length_196_cov_2.006211_g72719_i0reverse_frame_2 - 0.29 11.0 0.2 0.34 10.8 0.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Dna2 PF08696.11 NODE_80659_length_196_cov_2.006211_g72718_i0forward_frame_2 - 0.062 13.1 0.3 0.076 12.8 0.3 1.0 1 0 0 1 1 1 0 DNA replication factor Dna2 Nodulin_late PF07127.11 NODE_80658_length_196_cov_2.031056_g72717_i0reverse_frame_2 - 0.054 13.8 0.1 0.066 13.6 0.1 1.1 1 0 0 1 1 1 0 Late nodulin protein DPM3 PF08285.11 NODE_80655_length_196_cov_2.074534_g72714_i0reverse_frame_3 - 0.043 14.0 0.7 0.043 14.0 0.7 1.0 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DHquinase_II PF01220.19 NODE_80655_length_196_cov_2.074534_g72714_i0forward_frame_3 - 3.6e-21 75.3 1.2 3.8e-21 75.2 1.2 1.0 1 0 0 1 1 1 1 Dehydroquinase class II LpxB PF02684.15 NODE_80655_length_196_cov_2.074534_g72714_i0forward_frame_3 - 0.0048 15.8 0.2 0.0053 15.6 0.2 1.0 1 0 0 1 1 1 1 Lipid-A-disaccharide synthetase DUF1744 PF08490.12 NODE_80650_length_196_cov_2.111801_g72709_i0reverse_frame_3 - 0.11 11.1 0.0 0.12 11.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1744) LHC PF00556.20 NODE_80648_length_196_cov_2.130435_g72707_i0forward_frame_3 - 1.3 9.3 7.6 3.7 7.8 0.8 2.2 2 0 0 2 2 2 0 Antenna complex alpha/beta subunit Humanin PF15040.6 NODE_80647_length_196_cov_2.136646_g72706_i0forward_frame_3 - 0.0045 16.4 2.7 0.008 15.6 2.7 1.3 1 0 0 1 1 1 1 Humanin family E1_4HB PF16191.5 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 0.028 14.6 0.2 0.032 14.4 0.2 1.1 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle PKcGMP_CC PF16808.5 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 0.038 13.8 3.5 2.8 7.8 0.1 3.2 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase MinE PF03776.14 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 0.055 13.5 0.8 0.065 13.2 0.7 1.3 1 1 0 1 1 1 0 Septum formation topological specificity factor MinE Pedibin PF08182.11 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 0.65 9.9 5.9 7.7 6.4 0.7 3.1 3 0 0 3 3 3 0 Pedibin/Hym-346 family UPF0242 PF06785.11 NODE_80646_length_196_cov_2.149068_g72705_i0reverse_frame_3 - 1.1 9.4 8.8 1.1 9.3 8.8 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF5409 PF17421.2 NODE_80645_length_196_cov_2.180124_g72704_i0reverse_frame_2 - 0.15 12.8 2.3 0.17 12.6 2.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Phage-tail_1 PF09097.10 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.0035 17.2 0.4 0.0053 16.6 0.4 1.3 1 1 0 1 1 1 1 Baseplate structural protein, domain 1 XhlA PF10779.9 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.011 15.9 1.2 0.058 13.6 1.2 2.2 1 1 0 1 1 1 0 Haemolysin XhlA DUF5082 PF16888.5 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.011 16.0 0.8 0.025 14.9 0.6 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF1664 PF07889.12 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.013 15.6 0.6 0.015 15.4 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.018 15.1 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus NPV_P10 PF05531.12 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.031 14.7 1.0 0.09 13.2 0.9 1.8 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein FlaC_arch PF05377.11 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.033 14.6 0.2 0.2 12.1 0.2 2.2 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) TRPM_tetra PF16519.5 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.056 13.5 0.1 0.21 11.7 0.1 1.9 1 1 1 2 2 2 0 Tetramerisation domain of TRPM DUF3563 PF12086.8 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.066 13.0 0.0 0.089 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3563) MscS_porin PF12795.7 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.068 12.7 0.0 0.079 12.5 0.0 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel porin domain End3 PF12761.7 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.074 13.2 0.1 0.089 12.9 0.1 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 Bacillus_HBL PF05791.11 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.078 12.8 0.4 0.085 12.7 0.4 1.0 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) AAA_13 PF13166.6 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.091 11.4 0.2 0.1 11.2 0.2 1.0 1 0 0 1 1 1 0 AAA domain FmiP_Thoc5 PF09766.9 NODE_80643_length_196_cov_2.198758_g72702_i0forward_frame_3 - 0.16 11.2 0.0 0.17 11.2 0.0 1.0 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 zf-BED PF02892.15 NODE_80638_length_196_cov_2.254658_g72697_i0forward_frame_3 - 0.0012 18.9 0.1 0.0017 18.3 0.1 1.2 1 0 0 1 1 1 1 BED zinc finger 1-cysPrx_C PF10417.9 NODE_80635_length_196_cov_2.267081_g72694_i0reverse_frame_3 - 2e-05 24.3 0.1 2.5e-05 24.0 0.1 1.2 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Cas_Cas4 PF01930.17 NODE_80632_length_196_cov_2.298137_g72691_i0reverse_frame_3 - 0.058 13.5 0.1 0.06 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF83 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks418.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks418.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks418.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks418.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:41:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Aconitase_2_N PF06434.13 NODE_80628_length_196_cov_2.409938_g72687_i0forward_frame_2 - 0.15 11.6 0.0 0.18 11.4 0.0 1.0 1 0 0 1 1 1 0 Aconitate hydratase 2 N-terminus Peptidase_M3 PF01432.20 NODE_80624_length_196_cov_2.453416_g72683_i0reverse_frame_3 - 0.022 14.1 0.0 0.022 14.0 0.0 1.0 1 0 0 1 1 1 0 Peptidase family M3 TILa PF12714.7 NODE_80624_length_196_cov_2.453416_g72683_i0reverse_frame_2 - 0.32 11.0 7.8 0.54 10.2 7.8 1.4 1 0 0 1 1 1 0 TILa domain PDR_CDR PF06422.12 NODE_80624_length_196_cov_2.453416_g72683_i0forward_frame_3 - 3.7 7.5 6.5 13 5.8 6.5 1.7 1 1 0 1 1 1 0 CDR ABC transporter DUF4674 PF15719.5 NODE_80623_length_196_cov_2.521739_g72682_i0forward_frame_2 - 0.13 12.3 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4674) SPATA3 PF15662.5 NODE_80621_length_196_cov_2.552795_g72680_i0reverse_frame_2 - 0.023 15.3 1.0 0.028 15.0 1.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family Na_Ca_ex PF01699.24 NODE_80617_length_196_cov_2.577640_g72676_i0reverse_frame_2 - 0.038 13.9 0.5 0.047 13.7 0.5 1.2 1 0 0 1 1 1 0 Sodium/calcium exchanger protein DUF4439 PF14530.6 NODE_80617_length_196_cov_2.577640_g72676_i0forward_frame_3 - 0.069 13.8 0.2 0.083 13.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4439) Inhibitor_I42 PF09394.10 NODE_80614_length_196_cov_2.602484_g72673_i0forward_frame_3 - 0.062 13.7 0.0 0.17 12.3 0.0 1.6 1 1 1 2 2 2 0 Chagasin family peptidase inhibitor I42 Meis_PKNOX_N PF16493.5 NODE_80610_length_196_cov_2.695652_g72669_i0forward_frame_3 - 0.0045 17.3 0.3 0.005 17.1 0.3 1.1 1 0 0 1 1 1 1 N-terminal of Homeobox Meis and PKNOX1 V-set_2 PF15910.5 NODE_80608_length_196_cov_2.701863_g72667_i0reverse_frame_3 - 0.051 13.7 1.9 0.081 13.0 1.9 1.5 1 1 0 1 1 1 0 ICOS V-set domain Sugar_tr PF00083.24 NODE_80606_length_196_cov_2.782609_g72665_i0reverse_frame_3 - 9.7e-09 34.6 0.7 1e-08 34.5 0.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF3524 PF12038.8 NODE_80606_length_196_cov_2.782609_g72665_i0forward_frame_2 - 0.055 13.3 0.1 0.062 13.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) YrhC PF14143.6 NODE_80603_length_196_cov_2.888199_g72662_i0forward_frame_3 - 0.062 13.4 0.2 0.073 13.2 0.2 1.2 1 0 0 1 1 1 0 YrhC-like protein IQCJ-SCHIP1 PF15157.6 NODE_80603_length_196_cov_2.888199_g72662_i0forward_frame_2 - 0.0094 15.8 0.0 0.01 15.7 0.0 1.0 1 0 0 1 1 1 1 Fusion protein IQCJ-SCHIP1 with IQ-like motif ZapB PF06005.12 NODE_80602_length_196_cov_2.913043_g72661_i0forward_frame_2 - 0.021 15.2 0.2 0.024 15.1 0.2 1.2 1 0 0 1 1 1 0 Cell division protein ZapB TSC22 PF01166.18 NODE_80602_length_196_cov_2.913043_g72661_i0forward_frame_2 - 0.086 13.2 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 TSC-22/dip/bun family Myb_DNA-bind_6 PF13921.6 NODE_80600_length_196_cov_2.993789_g72659_i0reverse_frame_2 - 0.00073 19.7 0.1 0.0011 19.2 0.1 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 NODE_80600_length_196_cov_2.993789_g72659_i0reverse_frame_2 - 0.018 15.2 0.0 0.026 14.7 0.0 1.3 1 0 0 1 1 1 0 Myb-like DNA-binding domain Atg29_N PF18388.1 NODE_80600_length_196_cov_2.993789_g72659_i0reverse_frame_2 - 0.024 14.4 0.3 0.035 13.9 0.3 1.3 1 0 0 1 1 1 0 Atg29 N-terminal domain Poxvirus_B22R_N PF13169.6 NODE_80600_length_196_cov_2.993789_g72659_i0reverse_frame_2 - 0.11 13.1 1.5 0.73 10.4 1.4 2.0 1 1 0 1 1 1 0 Poxvirus B22R protein N-terminal Erg28 PF03694.13 NODE_80599_length_196_cov_3.049689_g72658_i0forward_frame_3 - 0.048 14.1 0.1 0.05 14.0 0.1 1.1 1 0 0 1 1 1 0 Erg28 like protein zf-CSL PF05207.13 NODE_80598_length_196_cov_3.167702_g72657_i0forward_frame_3 - 1.8 8.3 6.6 6.1 6.7 6.6 1.8 1 1 0 1 1 1 0 CSL zinc finger UreD PF01774.17 NODE_80596_length_196_cov_3.267081_g72655_i0reverse_frame_2 - 0.12 12.3 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 UreD urease accessory protein MDMPI_C PF07398.11 NODE_80596_length_196_cov_3.267081_g72655_i0forward_frame_2 - 0.03 15.2 0.1 0.04 14.8 0.1 1.3 1 0 0 1 1 1 0 MDMPI C-terminal domain MIEAP PF16026.5 NODE_80592_length_196_cov_3.341615_g72651_i0reverse_frame_3 - 0.024 14.9 0.1 0.026 14.8 0.1 1.0 1 0 0 1 1 1 0 Mitochondria-eating protein Myosin_head PF00063.21 NODE_80591_length_196_cov_3.347826_g72650_i0reverse_frame_2 - 1.1e-11 43.8 0.3 1.1e-11 43.7 0.3 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) ArlS_N PF18719.1 NODE_80591_length_196_cov_3.347826_g72650_i0reverse_frame_2 - 0.049 13.8 0.3 0.053 13.7 0.3 1.1 1 0 0 1 1 1 0 ArlS sensor domain ALG3 PF05208.13 NODE_80590_length_196_cov_3.360248_g72649_i0forward_frame_2 - 0.072 12.5 2.9 0.084 12.3 2.9 1.0 1 0 0 1 1 1 0 ALG3 protein DNA_ligase_A_M PF01068.21 NODE_80590_length_196_cov_3.360248_g72649_i0forward_frame_2 - 0.14 11.8 1.0 0.15 11.7 1.0 1.0 1 0 0 1 1 1 0 ATP dependent DNA ligase domain DUF1719 PF08224.11 NODE_80584_length_196_cov_3.900621_g72643_i0reverse_frame_3 - 1.2 8.2 5.9 1.2 8.2 5.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) DUF2480 PF10652.9 NODE_80584_length_196_cov_3.900621_g72643_i0reverse_frame_2 - 0.0056 16.6 0.1 0.0058 16.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2480) Rad9 PF04139.13 NODE_80583_length_196_cov_3.987578_g72642_i0forward_frame_3 - 0.024 14.1 0.1 0.028 13.9 0.1 1.0 1 0 0 1 1 1 0 Rad9 TIMP PF00965.17 NODE_80583_length_196_cov_3.987578_g72642_i0forward_frame_2 - 0.0035 17.2 1.1 0.0038 17.1 1.1 1.1 1 0 0 1 1 1 1 Tissue inhibitor of metalloproteinase Toxin_11 PF07473.11 NODE_80582_length_196_cov_3.987578_g72641_i0reverse_frame_2 - 0.25 11.4 9.2 2.8 8.1 2.1 3.2 1 1 2 3 3 3 0 Spasmodic peptide gm9a; conotoxin from Conus species BON PF04972.17 NODE_80581_length_196_cov_4.664596_g72640_i0reverse_frame_2 - 2.1e-14 53.6 2.7 2.5e-14 53.3 2.7 1.1 1 0 0 1 1 1 1 BON domain PAC1 PF16094.5 NODE_80579_length_196_cov_5.093168_g72638_i0reverse_frame_2 - 0.065 12.4 0.1 0.075 12.2 0.1 1.0 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Epiglycanin_TR PF05647.11 NODE_80575_length_196_cov_11.819876_g72634_i0reverse_frame_2 - 0.014 15.3 0.0 0.016 15.1 0.0 1.0 1 0 0 1 1 1 0 Tandem-repeating region of mucin, epiglycanin-like TruB_C PF09142.11 NODE_80572_length_196_cov_18.770186_g72631_i0reverse_frame_2 - 0.039 13.7 0.0 0.068 13.0 0.0 1.4 1 0 0 1 1 1 0 tRNA Pseudouridine synthase II, C terminal PAP2_3 PF14378.6 NODE_80571_length_196_cov_22.409938_g72630_i0reverse_frame_2 - 0.19 11.4 2.1 0.21 11.3 2.1 1.3 1 1 0 1 1 1 0 PAP2 superfamily PDZ_3 PF17815.1 NODE_80568_length_196_cov_32.776398_g72627_i0reverse_frame_3 - 0.071 13.0 0.1 0.073 12.9 0.1 1.1 1 0 0 1 1 1 0 PDZ domain UPF0728 PF15092.6 NODE_80568_length_196_cov_32.776398_g72627_i0reverse_frame_3 - 0.1 12.4 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 Sec23_trunk PF04811.15 NODE_80557_length_196_cov_40.782609_g72616_i0reverse_frame_2 - 8.7e-10 38.6 0.0 8.7e-10 38.6 0.0 1.0 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain DNA_mis_repair PF01119.19 NODE_80556_length_196_cov_41.279503_g72615_i0reverse_frame_3 - 0.13 12.0 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 DNA mismatch repair protein, C-terminal domain DivIC PF04977.15 NODE_80556_length_196_cov_41.279503_g72615_i0forward_frame_2 - 0.17 11.7 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 Septum formation initiator CAAX_1 PF15895.5 NODE_80553_length_196_cov_43.248447_g72612_i0forward_frame_2 - 0.0039 17.1 1.7 0.004 17.1 1.7 1.0 1 0 0 1 1 1 1 CAAX box cerebral protein 1 SSP160 PF06933.11 NODE_80549_length_196_cov_46.807453_g72608_i0reverse_frame_2 - 0.015 13.5 3.5 0.015 13.5 3.5 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF3756 PF12581.8 NODE_80545_length_196_cov_49.422360_g72604_i0reverse_frame_3 - 0.13 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3756) WD40 PF00400.32 NODE_80545_length_196_cov_49.422360_g72604_i0forward_frame_3 - 4.8e-05 24.0 0.3 9e-05 23.2 0.1 1.5 2 0 0 2 2 2 1 WD domain, G-beta repeat MRFAP1 PF15155.6 NODE_80541_length_196_cov_63.354037_g72600_i0forward_frame_2 - 0.012 16.1 0.1 0.014 16.0 0.1 1.1 1 0 0 1 1 1 0 MORF4 family-associated protein1 SRP14 PF02290.15 NODE_80539_length_196_cov_67.652174_g72598_i0reverse_frame_2 - 0.17 12.3 9.3 0.23 11.9 9.3 1.1 1 0 0 1 1 1 0 Signal recognition particle 14kD protein SRP9-21 PF05486.12 NODE_80539_length_196_cov_67.652174_g72598_i0reverse_frame_2 - 9.8 6.6 14.3 11 6.4 2.5 2.0 1 1 1 2 2 2 0 Signal recognition particle 9 kDa protein (SRP9) DUF1156 PF06634.12 NODE_80538_length_196_cov_67.776398_g72597_i0forward_frame_3 - 0.1 12.7 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1156) Tat PF00539.18 NODE_80537_length_196_cov_68.099379_g72596_i0reverse_frame_3 - 0.39 10.9 4.8 0.93 9.7 4.8 1.7 1 1 0 1 1 1 0 Transactivating regulatory protein (Tat) Sigma70_ECF PF07638.11 NODE_80535_length_196_cov_71.285714_g72594_i0forward_frame_3 - 0.031 14.2 3.7 0.037 13.9 3.7 1.0 1 0 0 1 1 1 0 ECF sigma factor PhnA_Zn_Ribbon PF08274.12 NODE_80534_length_196_cov_71.925466_g72593_i0forward_frame_2 - 0.069 13.1 0.6 0.12 12.4 0.6 1.4 1 0 0 1 1 1 0 PhnA Zinc-Ribbon DUF4812 PF16071.5 NODE_80532_length_196_cov_80.347826_g72591_i0forward_frame_3 - 0.031 14.1 0.2 0.038 13.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4812) S-antigen PF05756.11 NODE_80530_length_196_cov_88.801242_g72589_i0forward_frame_2 - 2.2 8.7 3.2 2.5 8.5 3.2 1.2 1 0 0 1 1 1 0 S-antigen protein DUF525 PF04379.14 NODE_80529_length_196_cov_90.987578_g72588_i0forward_frame_3 - 0.032 14.5 0.2 0.041 14.1 0.2 1.2 1 0 0 1 1 1 0 ApaG domain MHC_II_beta PF00969.19 NODE_80529_length_196_cov_90.987578_g72588_i0forward_frame_2 - 0.011 15.8 0.0 0.013 15.5 0.0 1.2 1 0 0 1 1 1 0 Class II histocompatibility antigen, beta domain TetR_C_8 PF14278.6 NODE_80527_length_196_cov_103.577640_g72586_i0reverse_frame_3 - 0.019 15.1 0.4 0.02 15.0 0.4 1.1 1 0 0 1 1 1 0 Transcriptional regulator C-terminal region DUF4494 PF14902.6 NODE_80527_length_196_cov_103.577640_g72586_i0reverse_frame_2 - 0.0023 17.8 0.8 0.0024 17.7 0.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4494) Nodulin_late PF07127.11 NODE_80525_length_196_cov_112.099379_g72584_i0reverse_frame_2 - 0.18 12.2 2.7 5.5 7.4 0.1 2.1 1 1 1 2 2 2 0 Late nodulin protein Adipokin_hormo PF06377.11 NODE_80522_length_196_cov_135.726708_g72581_i0forward_frame_2 - 0.17 12.3 0.0 0.25 11.7 0.0 1.2 1 0 0 1 1 1 0 Adipokinetic hormone zf-CCHC_4 PF14392.6 NODE_80519_length_196_cov_163.950311_g72578_i0reverse_frame_3 - 0.012 15.3 0.2 0.022 14.5 0.2 1.4 1 0 0 1 1 1 0 Zinc knuckle UPF0731 PF14982.6 NODE_80517_length_196_cov_221.428571_g72576_i0forward_frame_3 - 0.062 13.5 0.5 0.83 9.9 0.2 1.9 1 1 1 2 2 2 0 UPF0731 family ATP-synt_Eps PF04627.13 NODE_80509_length_196_cov_95943.223602_g72568_i0reverse_frame_3 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ATP synthase epsilon chain eIF3_subunit PF08597.10 NODE_80507_length_196_cov_144204.012422_g72566_i0forward_frame_2 - 0.034 14.1 1.0 0.043 13.7 1.0 1.0 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Lamprin PF06403.11 NODE_80502_length_197_cov_0.858025_g72561_i0forward_frame_2 - 1.7 8.6 12.0 2.6 8.0 12.0 1.4 1 1 0 1 1 1 0 Lamprin PUL PF08324.11 NODE_80498_length_197_cov_0.919753_g72557_i0forward_frame_2 - 0.058 12.6 0.0 0.062 12.5 0.0 1.0 1 0 0 1 1 1 0 PUL domain Sec20 PF03908.13 NODE_80497_length_197_cov_0.925926_g72556_i0reverse_frame_3 - 0.062 13.2 0.7 0.063 13.2 0.7 1.1 1 0 0 1 1 1 0 Sec20 Cadherin_2 PF08266.12 NODE_80492_length_197_cov_0.950617_g72551_i0forward_frame_3 - 0.16 11.8 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Cadherin-like Nif11 PF07862.11 NODE_80491_length_197_cov_0.962963_g72550_i0reverse_frame_2 - 0.15 12.4 0.1 0.18 12.2 0.1 1.3 1 1 0 1 1 1 0 Nif11 domain Rsm1 PF08600.10 NODE_80489_length_197_cov_0.969136_g72548_i0reverse_frame_3 - 0.057 13.6 0.4 0.068 13.3 0.4 1.1 1 0 0 1 1 1 0 Rsm1-like PP_kinase_C PF13090.6 NODE_80485_length_197_cov_0.975309_g72544_i0reverse_frame_2 - 0.13 11.8 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain 2 preATP-grasp_3 PF18301.1 NODE_80475_length_197_cov_0.981481_g72534_i0forward_frame_2 - 0.027 14.7 0.0 0.029 14.6 0.0 1.0 1 0 0 1 1 1 0 pre ATP-grasp 3 domain zf-HC3 PF16827.5 NODE_80474_length_197_cov_0.981481_g72533_i0reverse_frame_3 - 0.022 14.9 0.1 0.032 14.5 0.1 1.2 1 0 0 1 1 1 0 zinc-finger Viral_Beta_CD PF04530.12 NODE_80469_length_197_cov_0.987654_g72528_i0reverse_frame_2 - 0.04 14.2 0.0 0.044 14.1 0.0 1.1 1 0 0 1 1 1 0 Viral Beta C/D like family DUF1980 PF09323.10 NODE_80469_length_197_cov_0.987654_g72528_i0reverse_frame_2 - 0.19 11.6 0.3 0.19 11.6 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) MAP17 PF15807.5 NODE_80469_length_197_cov_0.987654_g72528_i0forward_frame_3 - 0.092 13.0 0.3 0.11 12.8 0.3 1.2 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Nucleos_tra2_N PF01773.20 NODE_80469_length_197_cov_0.987654_g72528_i0forward_frame_3 - 0.12 13.0 0.1 0.15 12.7 0.1 1.2 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter N-terminus Lamprin PF06403.11 NODE_80461_length_197_cov_0.987654_g72520_i0forward_frame_3 - 0.061 13.3 0.8 0.068 13.1 0.8 1.1 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_80459_length_197_cov_0.987654_g72518_i0reverse_frame_2 - 0.0085 16.1 0.1 0.0085 16.1 0.1 1.1 1 0 0 1 1 1 1 Lamprin NUC153 PF08159.12 NODE_80454_length_197_cov_0.987654_g72513_i0forward_frame_3 - 0.034 14.0 0.8 0.05 13.4 0.8 1.2 1 0 0 1 1 1 0 NUC153 domain F-box-like PF12937.7 NODE_80454_length_197_cov_0.987654_g72513_i0forward_frame_2 - 0.076 12.9 0.1 0.12 12.3 0.1 1.3 1 0 0 1 1 1 0 F-box-like Exop_C PF18559.1 NODE_80453_length_197_cov_0.987654_g72512_i0forward_frame_3 - 0.1 12.5 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Galactose-binding domain-like Herpes_LMP2 PF07415.11 NODE_80451_length_197_cov_0.987654_g72510_i0forward_frame_3 - 0.23 10.2 0.0 0.24 10.1 0.0 1.1 1 0 0 1 1 1 0 Gammaherpesvirus latent membrane protein (LMP2) protein FeThRed_B PF02943.15 NODE_80441_length_197_cov_0.987654_g72500_i0reverse_frame_2 - 0.014 15.4 0.2 0.016 15.2 0.2 1.1 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain TPK_B1_binding PF04265.14 NODE_80441_length_197_cov_0.987654_g72500_i0reverse_frame_2 - 0.015 15.0 0.1 0.019 14.7 0.1 1.3 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain DUF2031 PF09592.10 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.0026 17.3 5.8 0.0027 17.3 5.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2031) Jnk-SapK_ap_N PF09744.9 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.018 15.3 5.6 0.021 15.0 5.6 1.0 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 RPA_interact_C PF14768.6 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.055 14.0 0.3 0.067 13.8 0.3 1.2 1 0 0 1 1 1 0 Replication protein A interacting C-terminal DUF1043 PF06295.12 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.11 12.5 3.8 0.14 12.1 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1043) UPF0242 PF06785.11 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.2 11.7 6.2 0.24 11.5 6.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF724 PF05266.14 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.25 11.1 6.0 0.26 11.1 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Mvb12 PF09452.10 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.26 11.7 3.6 4.5 7.8 0.2 2.0 1 1 1 2 2 2 0 ESCRT-I subunit Mvb12 Spc24 PF08286.11 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.35 11.1 5.9 2.1 8.6 2.3 2.0 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DivIC PF04977.15 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.42 10.4 4.8 0.61 9.9 4.1 1.7 1 1 0 1 1 1 0 Septum formation initiator CHD5 PF04420.14 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.45 10.4 5.0 0.54 10.1 3.9 1.6 1 1 0 1 1 1 0 CHD5-like protein DUF2120 PF09893.9 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 0.47 10.6 3.6 9.9 6.3 0.3 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) TMPIT PF07851.13 NODE_80433_length_197_cov_0.987654_g72492_i0reverse_frame_2 - 1.2 8.3 5.2 1.3 8.2 5.2 1.0 1 0 0 1 1 1 0 TMPIT-like protein SLC3A2_N PF16028.5 NODE_80432_length_197_cov_0.987654_g72491_i0reverse_frame_3 - 0.22 11.1 0.9 8.3 6.0 0.2 2.1 1 1 1 2 2 2 0 Solute carrier family 3 member 2 N-terminus His_Phos_2 PF00328.22 NODE_80432_length_197_cov_0.987654_g72491_i0reverse_frame_2 - 0.16 11.3 0.0 0.16 11.3 0.0 1.0 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) DUF2256 PF10013.9 NODE_80424_length_197_cov_1.055556_g72483_i0forward_frame_2 - 0.029 14.5 0.4 0.039 14.1 0.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) Toxin_30 PF08117.11 NODE_80423_length_197_cov_1.061728_g72482_i0forward_frame_3 - 0.053 13.8 4.4 0.053 13.8 4.4 2.0 2 0 0 2 2 2 0 Ptu family SH3_12 PF18129.1 NODE_80423_length_197_cov_1.061728_g72482_i0forward_frame_2 - 0.076 13.1 0.0 0.086 12.9 0.0 1.1 1 0 0 1 1 1 0 Xrn1 SH3-like domain Collagen_bind PF05737.12 NODE_80421_length_197_cov_1.074074_g72480_i0reverse_frame_2 - 0.19 11.9 0.0 0.21 11.8 0.0 1.0 1 0 0 1 1 1 0 Collagen binding domain SR-25 PF10500.9 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.018 14.7 9.6 0.018 14.6 9.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4647 PF15504.6 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.022 13.9 3.1 0.023 13.8 3.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4647) Med19 PF10278.9 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.063 13.2 13.9 0.067 13.1 13.9 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Peptidase_S49_N PF08496.10 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.19 11.8 6.0 0.19 11.8 6.0 1.0 1 0 0 1 1 1 0 Peptidase family S49 N-terminal NPR3 PF03666.13 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.21 10.4 5.4 0.23 10.2 5.4 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Conotoxin PF02950.17 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 0.98 10.5 9.6 1.2 10.1 9.6 1.2 1 0 0 1 1 1 0 Conotoxin Ferlin_C PF16165.5 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 3.9 7.4 8.4 4.7 7.2 8.4 1.2 1 0 0 1 1 1 0 Ferlin C-terminus RNA_pol_Rpc4 PF05132.14 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 4.4 7.7 8.9 5.2 7.5 8.9 1.0 1 0 0 1 1 1 0 RNA polymerase III RPC4 RR_TM4-6 PF06459.12 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 7.7 6.3 9.7 8 6.2 9.7 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 NODE_80417_length_197_cov_1.098765_g72476_i0reverse_frame_2 - 9.9 4.8 5.4 10 4.8 5.4 1.0 1 0 0 1 1 1 0 Presenilin m04gp34like PF12216.8 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_2 - 0.047 13.3 0.0 0.048 13.2 0.0 1.0 1 0 0 1 1 1 0 Immune evasion protein DUF4349 PF14257.6 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_2 - 0.074 12.5 1.2 0.074 12.5 1.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) DUF2070 PF09843.9 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_2 - 0.37 9.0 1.7 0.38 9.0 1.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2207 PF09972.9 NODE_80417_length_197_cov_1.098765_g72476_i0forward_frame_2 - 0.63 8.7 1.1 0.65 8.7 1.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ribosomal_L35p PF01632.19 NODE_80416_length_197_cov_1.104938_g72475_i0forward_frame_2 - 0.0018 18.7 1.3 0.0022 18.4 1.3 1.2 1 0 0 1 1 1 1 Ribosomal protein L35 DUF5432 PF17497.2 NODE_80416_length_197_cov_1.104938_g72475_i0forward_frame_2 - 0.18 11.9 0.3 16 5.6 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5432) Tail_tube PF10618.9 NODE_80415_length_197_cov_1.123457_g72474_i0reverse_frame_3 - 0.14 12.0 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Phage tail tube protein DsbD_2 PF13386.6 NODE_80412_length_197_cov_1.148148_g72471_i0forward_frame_2 - 0.047 13.6 0.0 0.052 13.5 0.0 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region S_4TM PF18159.1 NODE_80411_length_197_cov_1.148148_g72470_i0forward_frame_3 - 0.14 11.4 0.4 0.14 11.4 0.4 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain TMEM247 PF15444.6 NODE_80409_length_197_cov_1.160494_g72468_i0forward_frame_3 - 8.3 6.4 5.9 9.6 6.2 5.9 1.1 1 0 0 1 1 1 0 Transmembrane protein 247 Opiods_neuropep PF01160.18 NODE_80407_length_197_cov_1.166667_g72466_i0forward_frame_3 - 0.022 14.8 2.6 0.24 11.5 0.2 2.1 2 0 0 2 2 2 0 Vertebrate endogenous opioids neuropeptide DUF4412 PF14371.6 NODE_80399_length_197_cov_1.191358_g72458_i0reverse_frame_2 - 0.0095 15.8 0.1 0.0097 15.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4412) zf-UBP PF02148.19 NODE_80399_length_197_cov_1.191358_g72458_i0forward_frame_3 - 0.26 11.6 7.5 0.39 11.1 7.5 1.4 1 0 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein DUF5544 PF17698.1 NODE_80398_length_197_cov_1.197531_g72457_i0reverse_frame_3 - 0.05 13.7 0.1 0.054 13.6 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5544) LCCL PF03815.19 NODE_80398_length_197_cov_1.197531_g72457_i0reverse_frame_3 - 0.066 13.3 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 LCCL domain Rubella_E1 PF05748.11 NODE_80398_length_197_cov_1.197531_g72457_i0forward_frame_3 - 0.018 13.9 0.7 0.02 13.8 0.7 1.0 1 0 0 1 1 1 0 Rubella membrane glycoprotein E1 Dicty_CTDC PF00526.18 NODE_80395_length_197_cov_1.216049_g72454_i0reverse_frame_3 - 0.018 14.9 1.4 0.018 14.9 1.4 1.6 2 0 0 2 2 2 0 Dictyostelium (slime mold) repeat PP2C PF00481.21 NODE_80395_length_197_cov_1.216049_g72454_i0forward_frame_2 - 0.00051 19.8 0.0 0.00058 19.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Ank_5 PF13857.6 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 3.9e-10 39.8 0.0 9.2e-06 25.8 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 1.1e-07 32.3 0.0 1.5e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 1.2e-06 28.4 0.0 0.082 13.5 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 1.5e-06 28.7 0.0 3.2e-06 27.6 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_80387_length_197_cov_1.228395_g72446_i0forward_frame_3 - 0.0097 16.3 0.0 0.65 10.5 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Rdx PF10262.9 NODE_80386_length_197_cov_1.234568_g72445_i0forward_frame_3 - 0.2 11.9 1.6 0.23 11.7 1.3 1.3 1 1 0 1 1 1 0 Rdx family FAM72 PF14976.6 NODE_80383_length_197_cov_1.234568_g72442_i0forward_frame_3 - 0.0049 17.0 1.2 0.0058 16.8 1.2 1.1 1 0 0 1 1 1 1 FAM72 protein CYSTM PF12734.7 NODE_80379_length_197_cov_1.246914_g72438_i0forward_frame_2 - 2.2 8.7 26.2 4.6 7.6 26.1 1.7 1 1 0 1 1 1 0 Cysteine-rich TM module stress tolerance Ribosomal_L30_N PF08079.12 NODE_80376_length_197_cov_1.290123_g72435_i0forward_frame_2 - 0.0053 17.0 1.1 0.0072 16.6 1.1 1.1 1 0 0 1 1 1 1 Ribosomal L30 N-terminal domain YccF PF03733.13 NODE_80374_length_197_cov_1.302469_g72433_i0reverse_frame_3 - 0.81 10.4 8.2 1.1 10.0 8.2 1.1 1 0 0 1 1 1 0 Inner membrane component domain Albumin_I PF08027.11 NODE_80372_length_197_cov_1.314815_g72431_i0forward_frame_3 - 0.87 9.3 4.3 8.2 6.1 0.1 2.2 2 0 0 2 2 2 0 Albumin I chain b zf-HC5HC2H_2 PF13832.6 NODE_80371_length_197_cov_1.314815_g72430_i0reverse_frame_3 - 0.077 13.2 0.3 0.081 13.1 0.3 1.1 1 0 0 1 1 1 0 PHD-zinc-finger like domain C1_1 PF00130.22 NODE_80369_length_197_cov_1.333333_g72428_i0reverse_frame_3 - 0.45 10.4 6.0 0.71 9.8 6.0 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) m04gp34like PF12216.8 NODE_80368_length_197_cov_1.339506_g72427_i0reverse_frame_3 - 0.1 12.2 0.2 0.11 12.0 0.2 1.0 1 0 0 1 1 1 0 Immune evasion protein Mucin PF01456.17 NODE_80368_length_197_cov_1.339506_g72427_i0reverse_frame_2 - 0.18 11.8 6.6 0.2 11.6 6.6 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein zf-UBP_var PF17807.1 NODE_80364_length_197_cov_1.358025_g72423_i0reverse_frame_3 - 0.027 14.2 0.6 0.04 13.7 0.6 1.4 1 0 0 1 1 1 0 Variant UBP zinc finger Myb_DNA-binding PF00249.31 NODE_80363_length_197_cov_1.358025_g72422_i0reverse_frame_2 - 0.013 15.7 0.1 0.018 15.2 0.1 1.4 1 0 0 1 1 1 0 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_80363_length_197_cov_1.358025_g72422_i0reverse_frame_2 - 0.015 15.5 0.1 0.021 15.1 0.1 1.3 1 0 0 1 1 1 0 Myb-like DNA-binding domain Histone_H2A_C PF16211.5 NODE_80362_length_197_cov_1.358025_g72421_i0forward_frame_2 - 0.061 13.1 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Sugar_tr PF00083.24 NODE_80360_length_197_cov_1.370370_g72419_i0reverse_frame_3 - 0.0045 15.9 0.0 0.0046 15.9 0.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF4179 PF13786.6 NODE_80360_length_197_cov_1.370370_g72419_i0reverse_frame_3 - 0.046 14.2 0.0 0.059 13.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) DUF4441 PF14536.6 NODE_80355_length_197_cov_1.388889_g72414_i0reverse_frame_2 - 0.0055 16.9 0.6 0.0068 16.6 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4441) Luteo_PO PF04662.13 NODE_80354_length_197_cov_1.401235_g72413_i0reverse_frame_3 - 0.00015 21.5 0.0 0.00016 21.4 0.0 1.0 1 0 0 1 1 1 1 Luteovirus P0 protein DUF1149 PF06619.11 NODE_80353_length_197_cov_1.401235_g72412_i0forward_frame_3 - 0.029 14.6 0.0 0.035 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1149) MotB_plug PF13677.6 NODE_80352_length_197_cov_1.407407_g72411_i0forward_frame_3 - 0.0087 15.6 1.1 0.011 15.3 1.1 1.2 1 0 0 1 1 1 1 Membrane MotB of proton-channel complex MotA/MotB ADAM_CR_2 PF17771.1 NODE_80350_length_197_cov_1.425926_g72409_i0forward_frame_3 - 0.056 14.0 1.7 0.065 13.8 1.7 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich domain Arteri_Gl PF00951.18 NODE_80340_length_197_cov_1.456790_g72399_i0forward_frame_3 - 0.044 13.6 2.8 0.043 13.6 2.8 1.1 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF945 PF06097.11 NODE_80339_length_197_cov_1.462963_g72398_i0reverse_frame_3 - 0.063 12.4 1.5 0.068 12.3 1.5 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF945) PgaD PF13994.6 NODE_80338_length_197_cov_1.462963_g72397_i0reverse_frame_3 - 0.17 11.9 1.5 0.2 11.7 1.5 1.0 1 0 0 1 1 1 0 PgaD-like protein L_HMGIC_fpl PF10242.9 NODE_80338_length_197_cov_1.462963_g72397_i0reverse_frame_2 - 9.7 6.4 11.0 12 6.1 11.0 1.0 1 0 0 1 1 1 0 Lipoma HMGIC fusion partner-like protein MA3 PF02847.17 NODE_80338_length_197_cov_1.462963_g72397_i0forward_frame_2 - 0.0021 18.1 2.0 0.0024 17.8 2.0 1.0 1 0 0 1 1 1 1 MA3 domain PriC PF07445.12 NODE_80338_length_197_cov_1.462963_g72397_i0forward_frame_2 - 0.013 15.4 7.5 0.014 15.3 7.5 1.1 1 0 0 1 1 1 0 Primosomal replication protein priC DUF1104 PF06518.11 NODE_80338_length_197_cov_1.462963_g72397_i0forward_frame_2 - 0.28 11.6 6.0 0.31 11.5 6.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) ARD PF03079.14 NODE_80338_length_197_cov_1.462963_g72397_i0forward_frame_2 - 0.38 10.9 5.7 0.42 10.8 5.7 1.0 1 0 0 1 1 1 0 ARD/ARD' family zf-LYAR PF08790.11 NODE_80329_length_197_cov_1.475309_g72388_i0forward_frame_3 - 0.066 13.1 1.9 0.18 11.7 1.9 1.8 1 0 0 1 1 1 0 LYAR-type C2HC zinc finger CAAD PF14159.6 NODE_80328_length_197_cov_1.475309_g72387_i0forward_frame_3 - 0.28 11.1 0.9 1.4 8.9 0.1 1.9 1 1 1 2 2 2 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase IL11 PF07400.11 NODE_80326_length_197_cov_1.475309_g72385_i0forward_frame_3 - 0.045 13.4 0.2 0.052 13.2 0.2 1.1 1 0 0 1 1 1 0 Interleukin 11 DNA_ligase_A_M PF01068.21 NODE_80326_length_197_cov_1.475309_g72385_i0forward_frame_2 - 3.6e-12 46.4 0.1 3.8e-12 46.3 0.1 1.0 1 0 0 1 1 1 1 ATP dependent DNA ligase domain GldM_N PF12081.8 NODE_80325_length_197_cov_1.475309_g72384_i0forward_frame_3 - 0.1 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 GldM N-terminal domain Pkinase PF00069.25 NODE_80320_length_197_cov_1.475309_g72379_i0forward_frame_3 - 4.3e-12 46.0 0.6 4.5e-12 45.9 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_80320_length_197_cov_1.475309_g72379_i0forward_frame_3 - 0.00038 19.8 0.4 0.00038 19.8 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3622 PF12286.8 NODE_80320_length_197_cov_1.475309_g72379_i0forward_frame_3 - 0.069 13.5 0.2 0.092 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3622) UBZ_FAAP20 PF15750.5 NODE_80317_length_197_cov_1.481481_g72376_i0reverse_frame_2 - 0.38 10.7 5.9 0.62 10.0 2.2 2.1 2 0 0 2 2 2 0 Ubiquitin-binding zinc-finger ParB PF08775.10 NODE_80317_length_197_cov_1.481481_g72376_i0forward_frame_3 - 0.048 14.1 4.4 0.052 14.0 4.4 1.1 1 0 0 1 1 1 0 ParB family zinc_ribbon_12 PF11331.8 NODE_80315_length_197_cov_1.481481_g72374_i0forward_frame_2 - 0.023 14.5 0.1 0.032 14.1 0.1 1.2 1 0 0 1 1 1 0 Probable zinc-ribbon domain Gag_p12 PF01141.18 NODE_80312_length_197_cov_1.481481_g72371_i0reverse_frame_2 - 0.063 13.6 0.2 0.071 13.5 0.2 1.1 1 0 0 1 1 1 0 Gag polyprotein, inner coat protein p12 CRAM_rpt PF07016.11 NODE_80311_length_197_cov_1.481481_g72370_i0reverse_frame_3 - 0.14 11.9 0.3 0.22 11.4 0.3 1.3 1 0 0 1 1 1 0 Cysteine-rich acidic integral membrane protein precursor DUF1307 PF06998.11 NODE_80310_length_197_cov_1.481481_g72369_i0reverse_frame_3 - 0.029 14.4 0.2 0.032 14.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) C8 PF08742.11 NODE_80309_length_197_cov_1.500000_g72368_i0forward_frame_3 - 0.043 14.2 0.6 0.068 13.6 0.6 1.4 1 1 0 1 1 1 0 C8 domain DNAJ_related PF12339.8 NODE_80308_length_197_cov_1.500000_g72367_i0forward_frame_2 - 0.0061 16.8 0.0 0.0061 16.8 0.0 1.0 1 0 0 1 1 1 1 DNA-J related protein VSP PF03302.13 NODE_80307_length_197_cov_1.506173_g72366_i0reverse_frame_3 - 0.016 14.1 0.5 0.017 14.0 0.5 1.0 1 0 0 1 1 1 0 Giardia variant-specific surface protein Cu PF17563.2 NODE_80302_length_197_cov_1.574074_g72361_i0forward_frame_3 - 0.49 10.6 5.5 4.9 7.4 5.5 2.1 1 1 0 1 1 1 0 Cupiennin Nucleolin_bd PF16725.5 NODE_80296_length_197_cov_1.648148_g72355_i0reverse_frame_2 - 0.013 15.1 0.1 0.013 15.1 0.1 1.3 2 0 0 2 2 2 0 Nucleolin binding domain LRR_10 PF18805.1 NODE_80294_length_197_cov_1.654321_g72353_i0reverse_frame_3 - 0.038 13.6 0.1 0.052 13.2 0.1 1.3 1 1 0 1 1 1 0 Leucine-rich repeat ABM PF03992.16 NODE_80294_length_197_cov_1.654321_g72353_i0reverse_frame_3 - 0.047 13.8 0.1 0.072 13.2 0.1 1.6 1 1 0 1 1 1 0 Antibiotic biosynthesis monooxygenase DUF3925 PF13063.6 NODE_80286_length_197_cov_1.703704_g72345_i0forward_frame_2 - 0.11 12.7 0.1 0.16 12.2 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3925) TspO_MBR PF03073.15 NODE_80282_length_197_cov_1.722222_g72341_i0reverse_frame_2 - 0.029 14.4 1.5 0.034 14.2 1.5 1.1 1 0 0 1 1 1 0 TspO/MBR family HR_lesion PF05514.11 NODE_80279_length_197_cov_1.728395_g72338_i0forward_frame_2 - 0.19 11.9 0.0 0.22 11.7 0.0 1.1 1 0 0 1 1 1 0 HR-like lesion-inducing CTC1 PF15489.6 NODE_80276_length_197_cov_1.728395_g72335_i0reverse_frame_2 - 0.16 9.5 0.3 0.16 9.4 0.3 1.0 1 0 0 1 1 1 0 CST, telomere maintenance, complex subunit CTC1 Corona_S1 PF01600.16 NODE_80276_length_197_cov_1.728395_g72335_i0forward_frame_2 - 0.014 14.2 0.1 0.014 14.2 0.1 1.0 1 0 0 1 1 1 0 Coronavirus S1 glycoprotein DUF2782 PF11191.8 NODE_80273_length_197_cov_1.771605_g72332_i0reverse_frame_2 - 0.11 12.7 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2782) Nucleoside_tran PF01733.18 NODE_80271_length_197_cov_1.783951_g72330_i0reverse_frame_2 - 0.0011 18.4 0.4 0.0012 18.4 0.4 1.0 1 0 0 1 1 1 1 Nucleoside transporter Colipase PF01114.18 NODE_80271_length_197_cov_1.783951_g72330_i0forward_frame_2 - 0.051 13.3 0.4 0.08 12.6 0.4 1.3 1 0 0 1 1 1 0 Colipase, N-terminal domain zf-Mss51 PF13824.6 NODE_80270_length_197_cov_1.790123_g72329_i0forward_frame_3 - 1.5 9.0 13.0 0.52 10.5 2.8 2.3 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 CBM_19 PF03427.13 NODE_80270_length_197_cov_1.790123_g72329_i0forward_frame_3 - 1.8 8.6 10.3 10 6.2 4.2 2.2 1 1 1 2 2 2 0 Carbohydrate binding domain (family 19) Zn_Tnp_IS91 PF14319.6 NODE_80270_length_197_cov_1.790123_g72329_i0forward_frame_3 - 8.2 6.5 15.0 7.2 6.7 13.4 1.7 1 1 0 1 1 1 0 Transposase zinc-binding domain MFS_1 PF07690.16 NODE_80267_length_197_cov_1.833333_g72326_i0forward_frame_2 - 4.9e-06 25.7 4.4 5.4e-06 25.6 4.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF2613 PF11021.8 NODE_80267_length_197_cov_1.833333_g72326_i0forward_frame_2 - 4.3 7.5 9.4 13 6.0 3.5 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2613) MAGI_u1 PF16663.5 NODE_80265_length_197_cov_1.858025_g72324_i0reverse_frame_2 - 0.2 11.7 0.0 0.28 11.3 0.0 1.2 1 0 0 1 1 1 0 Unstructured region on MAGI Gliadin PF13016.6 NODE_80263_length_197_cov_1.864198_g72322_i0forward_frame_3 - 0.074 13.5 0.0 0.1 13.0 0.0 1.3 1 0 0 1 1 1 0 Cys-rich Gliadin N-terminal Complex1_LYR_2 PF13233.6 NODE_80262_length_197_cov_1.870370_g72321_i0forward_frame_3 - 0.068 13.9 4.7 0.092 13.5 4.7 1.1 1 0 0 1 1 1 0 Complex1_LYR-like Na_Ala_symp PF01235.17 NODE_80261_length_197_cov_1.876543_g72320_i0forward_frame_3 - 0.12 11.7 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 Sodium:alanine symporter family PIF PF05092.12 NODE_80259_length_197_cov_1.895062_g72318_i0reverse_frame_2 - 0.007 15.1 0.0 0.0071 15.1 0.0 1.0 1 0 0 1 1 1 1 Per os infectivity Thoc2 PF11732.8 NODE_80258_length_197_cov_1.901235_g72317_i0reverse_frame_3 - 0.086 12.9 0.2 0.13 12.4 0.2 1.2 1 0 0 1 1 1 0 Transcription- and export-related complex subunit Linocin_M18 PF04454.12 NODE_80257_length_197_cov_1.907407_g72316_i0reverse_frame_3 - 0.09 12.0 0.1 0.097 11.9 0.1 1.0 1 0 0 1 1 1 0 Encapsulating protein for peroxidase DUF5474 PF17568.2 NODE_80257_length_197_cov_1.907407_g72316_i0forward_frame_2 - 0.035 14.2 0.5 0.056 13.5 0.1 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5474) DUF3573 PF12097.8 NODE_80254_length_197_cov_1.932099_g72313_i0reverse_frame_3 - 0.0099 14.7 1.6 0.0092 14.8 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3573) DUF2606 PF10794.9 NODE_80251_length_197_cov_1.956790_g72310_i0reverse_frame_2 - 0.035 13.9 0.4 0.035 13.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) Ribosomal_S9 PF00380.19 NODE_80249_length_197_cov_1.969136_g72308_i0reverse_frame_3 - 0.082 13.4 0.1 0.098 13.2 0.1 1.0 1 0 0 1 1 1 0 Ribosomal protein S9/S16 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks419.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks419.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks419.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks419.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TFIIA PF03153.13 ORF132474 - 1.8 8.5 27.9 2.6 8.0 27.9 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Na_Ca_ex PF01699.24 ORF128201 - 2.8e-20 72.8 12.1 4e-20 72.3 12.1 1.2 1 0 0 1 1 1 1 Sodium/calcium exchanger protein Calx-beta PF03160.14 ORF128201 - 1.6e-10 41.0 0.2 2.7e-10 40.3 0.2 1.4 1 0 0 1 1 1 1 Calx-beta domain Ribosomal_L35Ae PF01247.18 ORF128201 - 0.028 14.6 0.2 0.083 13.1 0.1 1.7 2 0 0 2 2 2 0 Ribosomal protein L35Ae DUF2304 PF10066.9 ORF128201 - 2.1 8.6 6.2 16 5.8 0.1 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) Nop PF01798.18 ORF125686 - 2e-82 276.1 1.0 2e-82 276.1 1.0 1.8 2 0 0 2 2 2 1 snoRNA binding domain, fibrillarin Trypan_PARP PF05887.11 ORF125686 - 0.1 12.5 18.7 0.18 11.8 18.7 1.4 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) DUF2201_N PF13203.6 ORF125686 - 1.1 8.8 10.7 2.1 7.9 10.7 1.5 1 0 0 1 1 1 0 Putative metallopeptidase domain RNA_polI_A34 PF08208.11 ORF125686 - 2.7 8.0 43.4 7.9 6.5 42.5 1.9 1 1 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 PUF PF00806.19 ORF123040 - 5.1e-32 107.8 12.4 3.2e-06 26.5 0.2 6.5 6 0 0 6 6 6 6 Pumilio-family RNA binding repeat IPT PF01745.16 ORF123040 - 0.0096 15.3 1.1 0.018 14.4 0.2 1.7 1 1 1 2 2 2 1 Isopentenyl transferase Syntaxin-5_N PF11416.8 ORF123040 - 0.03 13.5 0.4 5.6 6.3 0.1 2.8 2 0 0 2 2 2 0 Syntaxin-5 N-terminal, Sly1p-binding domain Bcl-2_3 PF15286.6 ORF123040 - 0.089 13.5 0.2 0.79 10.4 0.0 2.4 2 0 0 2 2 2 0 Apoptosis regulator M11, B cell 2 leukaemia/lymphoma like MHC_I PF00129.18 ORF123040 - 0.11 12.1 0.2 1.2 8.6 0.1 2.2 1 1 1 2 2 2 0 Class I Histocompatibility antigen, domains alpha 1 and 2 MFS_1 PF07690.16 ORF122933 - 4.6e-36 124.5 65.7 7.2e-30 104.1 38.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF122933 - 1.9e-09 36.9 18.8 6.2e-09 35.2 3.4 2.4 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 ORF122933 - 0.19 10.0 20.3 0.86 7.9 20.3 1.8 1 1 0 1 1 1 0 Transmembrane secretion effector LacY_symp PF01306.19 ORF122933 - 0.91 8.2 12.4 2.7 6.7 3.7 2.2 1 1 0 2 2 2 0 LacY proton/sugar symporter SpoVAB PF13782.6 ORF122933 - 0.97 9.8 0.0 0.97 9.8 0.0 3.6 4 1 0 4 4 4 0 Stage V sporulation protein AB Actin PF00022.19 ORF11578 - 1e-124 416.3 0.0 5.3e-124 413.9 0.0 1.8 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF11578 - 0.061 12.1 0.0 3.5 6.3 0.0 2.4 3 0 0 3 3 3 0 MreB/Mbl protein Ank_4 PF13637.6 ORF108743 - 4.8e-14 52.5 2.7 5.5e-05 23.6 0.0 4.9 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF108743 - 1.9e-13 50.8 3.8 0.00033 21.2 0.0 4.1 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF108743 - 1.1e-09 38.4 9.8 0.0043 17.3 0.0 4.9 4 1 1 5 5 5 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF108743 - 5.6e-09 35.5 6.2 0.00078 19.7 0.0 6.0 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF108743 - 1.6e-06 28.3 6.0 0.015 15.7 0.0 5.1 5 0 0 5 5 5 2 Ankyrin repeat Actin PF00022.19 ORF107757 - 1e-124 416.3 0.0 5.3e-124 413.9 0.0 1.8 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF107757 - 0.061 12.1 0.0 3.5 6.3 0.0 2.4 3 0 0 3 3 3 0 MreB/Mbl protein zf-H2C2_5 PF13909.6 NODE_15460_length_1130_cov_54.315982_g11682_i0forward_frame_1 - 0.58 10.0 3.0 11 5.9 0.1 2.4 2 0 0 2 2 2 0 C2H2-type zinc-finger domain CNOT1_TTP_bind PF16417.5 ORF97172 - 0.051 12.8 0.0 0.12 11.6 0.0 1.5 2 0 0 2 2 2 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Bestrophin PF01062.21 ORF96723 - 3.7e-10 39.7 0.0 6.6e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DUF1959 PF09218.10 ORF96723 - 0.022 14.9 0.1 0.14 12.3 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1959) HTH_32 PF13565.6 ORF96723 - 2.1 9.0 4.4 4.1 8.1 3.4 2.1 1 1 1 2 2 2 0 Homeodomain-like domain Dynein_C PF18199.1 ORF94846 - 1.5e-94 316.7 0.0 1.8e-94 316.5 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF94846 - 1.6e-07 31.3 0.0 3.6e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain DUF2968 PF11180.8 ORF93379 - 1 8.9 8.2 2 8.0 8.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) DUF4407 PF14362.6 ORF93379 - 6.7 6.0 7.8 10 5.4 7.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ABC_tran PF00005.27 ORF90728 - 3.1e-28 99.0 0.0 5.1e-28 98.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF90728 - 1.1e-09 38.6 0.4 0.00053 19.9 0.1 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_membrane PF00664.23 ORF90728 - 3.6e-09 36.7 0.2 4.7e-09 36.3 0.2 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF90728 - 2.5e-07 30.4 0.2 0.017 14.5 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 ORF90728 - 0.0001 22.2 0.0 0.00018 21.4 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF90728 - 0.00034 20.3 0.1 0.00067 19.3 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF90728 - 0.0017 18.4 0.5 0.0037 17.3 0.3 1.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_22 PF13401.6 ORF90728 - 0.0038 17.5 0.0 0.014 15.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 ORF90728 - 0.012 14.9 0.0 0.021 14.1 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_15 PF13175.6 ORF90728 - 0.016 14.9 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_16 PF13191.6 ORF90728 - 0.016 15.6 0.9 0.039 14.3 0.9 1.7 1 1 0 1 1 1 0 AAA ATPase domain Dynamin_N PF00350.23 ORF90728 - 0.021 14.9 0.8 0.042 13.9 0.8 1.4 1 0 0 1 1 1 0 Dynamin family DUF815 PF05673.13 ORF90728 - 0.035 13.3 0.0 0.05 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DUF2813 PF11398.8 ORF90728 - 0.041 13.1 0.1 0.065 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) AAA_25 PF13481.6 ORF90728 - 0.067 12.8 1.7 0.14 11.7 0.4 2.3 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF90728 - 0.069 13.7 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AIG1 PF04548.16 ORF90728 - 0.1 11.9 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 AIG1 family KOW PF00467.29 ORF86345 - 0.0012 18.7 0.1 0.003 17.5 0.1 1.7 1 0 0 1 1 1 1 KOW motif Rhomboid_SP PF12595.8 ORF86345 - 0.026 13.9 0.6 0.048 13.0 0.6 1.4 1 0 0 1 1 1 0 Rhomboid serine protease SH3_2 PF07653.17 ORF83939 - 1.2e-09 37.7 0.1 0.00067 19.3 0.1 2.4 2 0 0 2 2 2 2 Variant SH3 domain SH3_1 PF00018.28 ORF83939 - 4.8e-08 32.5 1.7 0.0021 17.6 0.3 2.4 2 0 0 2 2 2 2 SH3 domain SH3_9 PF14604.6 ORF83939 - 0.00047 19.9 0.4 0.31 10.9 0.0 2.4 2 0 0 2 2 2 2 Variant SH3 domain SH3_16 PF18348.1 ORF83939 - 0.026 14.3 1.4 1 9.2 0.2 2.5 2 0 0 2 2 2 0 Bacterial dipeptidyl-peptidase Sh3 domain HATPase_c PF02518.26 ORF8352 - 3.2e-09 37.3 0.8 7.5e-09 36.1 0.4 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF8352 - 7.3e-09 35.5 0.5 5.6e-08 32.7 0.0 2.7 2 1 0 2 2 2 1 His Kinase A (phospho-acceptor) domain DUF5640 PF18692.1 ORF8352 - 0.57 10.3 2.9 2.1 8.4 0.2 2.9 2 1 1 3 3 3 0 Family of unknown function (DUF5640) RCC1 PF00415.18 ORF64806 - 3e-75 248.7 3.7 1.9e-14 54.0 0.1 7.5 7 1 0 7 7 7 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF64806 - 1.6e-45 152.1 29.4 1.4e-07 31.1 0.9 7.7 8 0 0 8 8 8 7 Regulator of chromosome condensation (RCC1) repeat PapC_C PF13953.6 ORF64806 - 0.059 13.2 0.1 51 3.8 0.0 3.8 4 0 0 4 4 4 0 PapC C-terminal domain Hira PF07569.11 ORF64806 - 0.077 12.7 0.1 15 5.3 0.0 2.9 4 0 0 4 4 4 0 TUP1-like enhancer of split Kelch_6 PF13964.6 ORF64806 - 4.4 7.8 6.6 9.5 6.7 0.0 4.3 6 0 0 6 6 6 0 Kelch motif HMG_box PF00505.19 ORF5711 - 7.6e-16 58.3 26.3 5.1e-10 39.6 3.8 4.2 3 1 1 4 4 4 3 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF5711 - 1.3e-10 41.7 19.9 2e-06 28.3 1.0 4.3 3 2 1 4 4 4 3 HMG-box domain DIM1 PF02966.16 ORF5711 - 0.11 12.2 0.3 0.79 9.5 0.0 2.1 2 0 0 2 2 2 0 Mitosis protein DIM1 FAP206 PF12018.8 ORF55133 - 7.9e-05 22.3 0.1 0.011 15.2 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function YHS PF04945.13 ORF55133 - 0.052 13.7 0.6 1.8 8.7 0.1 2.7 2 0 0 2 2 2 0 YHS domain DUF749 PF05370.11 ORF53600 - 0.041 14.0 0.5 0.13 12.4 0.5 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF749) MORN PF02493.20 ORF415 - 8.6e-34 113.4 57.3 9.3e-06 25.2 1.1 10.3 9 1 0 9 9 9 9 MORN repeat ART PF01129.18 ORF28956 - 0.002 17.4 0.0 0.0037 16.6 0.0 1.4 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase DUF4373 PF14297.6 ORF28956 - 0.077 13.8 0.3 0.19 12.6 0.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4373) DEC-1_N PF04625.13 ORF28956 - 1.7 7.6 12.5 2.4 7.1 12.5 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Trypan_PARP PF05887.11 ORF28956 - 2.9 7.9 14.2 5 7.1 14.2 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) MBOAT PF03062.19 ORF24397 - 2.9e-06 26.9 3.4 5e-06 26.1 3.4 1.4 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family MBOAT_2 PF13813.6 ORF24397 - 2.4e-05 24.5 3.9 5.8e-05 23.3 3.9 1.7 1 0 0 1 1 1 1 Membrane bound O-acyl transferase family GHMP_kinases_N PF00288.26 ORF24397 - 0.26 11.6 0.0 0.26 11.6 0.0 2.7 3 0 0 3 3 3 0 GHMP kinases N terminal domain HAP1_N PF04849.13 ORF22924 - 0.00057 19.2 5.5 0.00057 19.2 5.5 2.2 2 0 0 2 2 2 1 HAP1 N-terminal conserved region U-box PF04564.15 ORF22924 - 0.0013 18.8 0.3 0.0043 17.2 0.1 2.0 2 0 0 2 2 2 1 U-box domain DUF4286 PF14114.6 ORF22924 - 0.0047 17.4 0.7 0.0047 17.4 0.7 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4286) TED PF08341.11 ORF22924 - 0.0074 16.6 2.1 0.02 15.2 0.3 2.5 2 0 0 2 2 2 1 Thioester domain tRNA-synt_2 PF00152.20 ORF21813 - 3.5e-82 276.0 0.1 4.2e-82 275.7 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF21813 - 0.0014 18.1 0.0 0.0056 16.2 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) DUF4131 PF13567.6 ORF152525 - 7.4 6.2 13.9 11 5.7 6.8 3.3 3 1 2 5 5 5 0 Domain of unknown function (DUF4131) MFS_1 PF07690.16 ORF146001 - 1.7e-07 30.5 7.9 3.2e-07 29.6 3.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF146001 - 1.8e-05 23.8 16.0 5.4e-05 22.2 16.0 2.0 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_2 PF13347.6 ORF146001 - 1.9e-05 23.4 1.6 1.9e-05 23.4 1.6 3.0 2 1 1 3 3 3 2 MFS/sugar transport protein HATPase_c PF02518.26 ORF140745 - 3.2e-09 37.3 0.8 7.5e-09 36.1 0.4 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF140745 - 7.3e-09 35.5 0.5 5.6e-08 32.7 0.0 2.7 2 1 0 2 2 2 1 His Kinase A (phospho-acceptor) domain DUF5640 PF18692.1 ORF140745 - 0.57 10.3 2.9 2.1 8.4 0.2 2.9 2 1 1 3 3 3 0 Family of unknown function (DUF5640) GpcrRhopsn4 PF10192.9 ORF136217 - 9.1e-37 126.8 24.7 1.2e-36 126.4 24.7 1.1 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain DUF1129 PF06570.11 ORF136217 - 0.00037 20.0 2.7 0.00037 20.0 2.7 2.1 2 1 0 2 2 2 1 Protein of unknown function (DUF1129) DUF4281 PF14108.6 ORF136217 - 0.0029 18.0 4.1 0.29 11.5 0.5 2.7 2 1 0 2 2 2 2 Domain of unknown function (DUF4281) DUF3290 PF11694.8 ORF136217 - 0.21 11.5 6.5 0.039 13.9 1.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3290) DUF5367 PF17329.2 ORF136217 - 2.1 8.5 16.8 0.25 11.5 4.3 3.5 1 1 3 4 4 4 0 Family of unknown function (DUF5367) MerC PF03203.14 ORF136217 - 7.9 7.0 9.0 11 6.5 6.7 2.4 1 1 1 2 2 2 0 MerC mercury resistance protein TMEM40 PF15817.5 ORF129731 - 0.00016 21.4 1.1 0.091 12.5 0.1 2.6 2 0 0 2 2 2 2 Transmembrane protein 40 family Phage_H_T_join PF05521.11 ORF129731 - 0.084 13.4 0.2 0.15 12.6 0.2 1.4 1 0 0 1 1 1 0 Phage head-tail joining protein DUF2207 PF09972.9 ORF129731 - 0.25 10.0 6.2 1.1 8.0 0.2 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) Metallophos PF00149.28 ORF128392 - 1.8e-10 41.7 0.3 3e-10 41.0 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF128392 - 0.0077 16.4 0.0 0.16 12.1 0.0 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain PhoD PF09423.10 ORF128392 - 0.21 10.6 1.4 0.4 9.6 1.4 1.4 1 0 0 1 1 1 0 PhoD-like phosphatase tRNA-synt_2 PF00152.20 ORF126304 - 3.5e-82 276.0 0.1 4.2e-82 275.7 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF126304 - 0.0014 18.1 0.0 0.0056 16.2 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) AAA PF00004.29 ORF11658 - 2.1e-37 128.5 0.0 4.9e-37 127.3 0.0 1.7 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF11658 - 4.1e-13 48.9 0.0 1.8e-12 46.8 0.0 2.1 2 0 0 2 2 2 1 AAA+ lid domain RuvB_N PF05496.12 ORF11658 - 6.7e-06 25.9 0.0 1.4e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Vps4_C PF09336.10 ORF11658 - 4.2e-05 23.5 0.6 0.00013 21.8 0.5 1.9 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_2 PF07724.14 ORF11658 - 4.8e-05 23.5 0.0 9.5e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 ORF11658 - 0.00012 22.1 0.0 0.00035 20.6 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF11658 - 0.00013 22.2 0.4 0.0028 17.9 0.3 2.5 1 1 1 2 2 2 1 AAA domain AAA_24 PF13479.6 ORF11658 - 0.00036 20.3 0.0 0.00083 19.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 ORF11658 - 0.00049 20.5 0.3 0.011 16.1 0.0 3.0 3 0 0 3 3 3 1 RNA helicase DUF815 PF05673.13 ORF11658 - 0.00059 19.1 0.0 0.0011 18.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_14 PF13173.6 ORF11658 - 0.00064 19.8 0.0 0.0013 18.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 ORF11658 - 0.00081 18.7 0.0 0.0015 17.9 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_18 PF13238.6 ORF11658 - 0.00089 19.8 0.2 0.0064 17.0 0.0 2.4 1 1 1 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF11658 - 0.00096 18.8 0.8 0.085 12.4 0.3 2.6 2 1 0 3 3 3 1 AAA domain Sigma54_activat PF00158.26 ORF11658 - 0.0016 18.2 0.0 0.7 9.6 0.0 2.9 3 0 0 3 3 3 1 Sigma-54 interaction domain AAA_7 PF12775.7 ORF11658 - 0.0016 18.0 0.1 0.0033 17.0 0.1 1.6 1 1 0 1 1 1 1 P-loop containing dynein motor region Mg_chelatase PF01078.21 ORF11658 - 0.0016 17.9 0.0 0.0039 16.6 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 ORF11658 - 0.0017 18.1 0.0 0.0032 17.2 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein ATPase PF06745.13 ORF11658 - 0.0032 16.8 0.4 0.65 9.3 0.1 2.3 1 1 1 2 2 2 1 KaiC AAA_16 PF13191.6 ORF11658 - 0.0044 17.4 0.0 0.012 16.0 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 ORF11658 - 0.015 15.5 0.0 0.027 14.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF11658 - 0.02 14.9 0.0 0.032 14.2 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 ORF11658 - 0.074 12.5 0.0 0.14 11.6 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_28 PF13521.6 ORF11658 - 0.088 13.0 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain Parvo_NS1 PF01057.17 ORF11658 - 0.11 11.5 0.1 0.2 10.7 0.1 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_3 PF07726.11 ORF11658 - 0.12 12.3 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Guanylate_kin PF00625.21 ORF11658 - 0.12 12.1 0.0 0.37 10.4 0.0 1.8 2 0 0 2 2 2 0 Guanylate kinase CPT PF07931.12 ORF11658 - 0.12 12.2 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein NACHT PF05729.12 ORF11658 - 0.14 12.1 0.3 0.72 9.7 0.1 2.1 1 1 1 2 2 2 0 NACHT domain AAA_30 PF13604.6 ORF11658 - 0.14 11.8 0.0 0.36 10.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain Peptidase_C1 PF00112.23 ORF110765 - 1.5e-55 188.6 4.8 2.5e-55 187.9 4.8 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF110765 - 3.4e-13 49.8 7.2 3.4e-13 49.8 7.2 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) PARP PF00644.20 ORF10568 - 3.3e-31 108.4 10.1 1.9e-21 76.6 1.5 4.5 2 2 0 2 2 2 2 Poly(ADP-ribose) polymerase catalytic domain DUF3990 PF13151.6 ORF10568 - 0.041 13.6 0.3 9.8 5.8 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3990) Tox-ART-HYD1 PF15633.6 ORF10568 - 0.049 14.3 0.0 0.13 12.9 0.0 1.7 1 0 0 1 1 1 0 HYD1 signature containing ADP-ribosyltransferase TMEM40 PF15817.5 ORF101766 - 0.00016 21.4 1.1 0.091 12.5 0.1 2.6 2 0 0 2 2 2 2 Transmembrane protein 40 family Phage_H_T_join PF05521.11 ORF101766 - 0.084 13.4 0.2 0.15 12.6 0.2 1.4 1 0 0 1 1 1 0 Phage head-tail joining protein DUF2207 PF09972.9 ORF101766 - 0.25 10.0 6.2 1.1 8.0 0.2 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) MscS_porin PF12795.7 ORF101177 - 2.4 7.6 11.7 0.056 13.0 4.9 1.6 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain LRR_6 PF13516.6 NODE_15472_length_1129_cov_387.900366_g2914_i6reverse_frame_3 - 0.00059 19.7 7.8 30 5.0 0.1 6.7 6 0 0 6 6 6 1 Leucine Rich repeat LRR_4 PF12799.7 NODE_15472_length_1129_cov_387.900366_g2914_i6reverse_frame_3 - 0.27 11.7 8.8 7.6 7.1 1.5 4.0 4 1 0 4 4 4 0 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_15472_length_1129_cov_387.900366_g2914_i6reverse_frame_3 - 0.45 11.3 2.6 9.3 7.3 0.2 3.5 3 0 0 3 3 3 0 Leucine Rich Repeat Acetyltransf_6 PF13480.7 NODE_15472_length_1129_cov_387.900366_g2914_i6reverse_frame_3 - 0.79 9.9 5.7 27 4.9 0.0 2.7 2 1 0 2 2 2 0 Acetyltransferase (GNAT) domain Sec23_helical PF04815.15 NODE_15460_length_1130_cov_54.315982_g11682_i0reverse_frame_3 - 2.2 8.1 6.1 1.1 9.2 0.3 3.1 2 1 0 3 3 3 0 Sec23/Sec24 helical domain Apolipoprotein PF01442.18 NODE_15460_length_1130_cov_54.315982_g11682_i0reverse_frame_3 - 2.8 7.8 23.9 0.98 9.3 11.3 3.9 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain DUF1993 PF09351.10 NODE_15460_length_1130_cov_54.315982_g11682_i0reverse_frame_3 - 8.8 6.4 16.9 0.08 13.1 5.1 3.1 2 1 2 4 4 4 0 Domain of unknown function (DUF1993) Fez1 PF06818.15 NODE_15460_length_1130_cov_54.315982_g11682_i0reverse_frame_3 - 9 6.7 48.2 0.87 10.0 12.1 3.3 2 1 1 3 3 3 0 Fez1 DUF4410 PF14366.6 ORF97059 - 0.17 11.8 0.2 0.47 10.3 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4410) DUF4200 PF13863.6 ORF9491 - 1.5e-10 41.5 18.3 1.5e-10 41.5 18.3 2.9 3 0 0 3 3 3 1 Domain of unknown function (DUF4200) Effector_1 PF04518.12 ORF9491 - 0.5 9.4 10.8 0.051 12.7 5.7 1.8 2 0 0 2 2 2 0 Effector from type III secretion system DASH_Dad4 PF08650.10 ORF9491 - 0.8 9.7 10.1 3.1 7.8 0.9 3.1 2 1 0 2 2 2 0 DASH complex subunit Dad4 Ost4 PF10215.9 ORF8737 - 0.2 11.5 0.1 0.36 10.7 0.1 1.4 1 0 0 1 1 1 0 Oligosaccaryltransferase Arrestin_N PF00339.29 ORF80146 - 1.2e-11 44.9 1.6 6.9e-10 39.1 0.1 3.0 3 0 0 3 3 3 1 Arrestin (or S-antigen), N-terminal domain Arrestin_C PF02752.22 ORF80146 - 0.00037 20.9 0.1 0.0093 16.4 0.0 2.3 2 0 0 2 2 2 1 Arrestin (or S-antigen), C-terminal domain DNA_ligase_A_C PF04679.15 ORF79105 - 9.9e-15 55.0 0.0 1.9e-14 54.0 0.0 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region BRCT_2 PF16589.5 ORF79105 - 6.9e-05 23.2 0.0 0.00014 22.2 0.0 1.4 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain DNA_ligase_A_M PF01068.21 ORF79105 - 0.0036 17.0 0.2 0.0058 16.3 0.2 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain NAD_Gly3P_dh_C PF07479.14 ORF7537 - 6.6e-46 156.1 0.9 1e-45 155.5 0.9 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 ORF7537 - 5.7e-34 117.4 0.1 8.7e-34 116.8 0.1 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DnaA_N PF11638.8 ORF7537 - 0.048 13.4 0.0 0.097 12.4 0.0 1.4 1 0 0 1 1 1 0 DnaA N-terminal domain NAD_binding_2 PF03446.15 ORF7537 - 0.076 13.2 0.1 0.21 11.7 0.0 1.8 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Polysacc_synt_3 PF13440.6 ORF69939 - 5.7e-06 25.8 11.7 1e-05 24.9 11.7 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein OEP PF02321.18 ORF57025 - 3.8e-21 75.7 5.5 2.5e-10 40.5 2.4 2.2 2 0 0 2 2 2 2 Outer membrane efflux protein MCM_bind PF09739.9 ORF55239 - 1.4e-67 228.5 0.0 1.7e-67 228.2 0.0 1.0 1 0 0 1 1 1 1 Mini-chromosome maintenance replisome factor Pkinase PF00069.25 ORF52069 - 1.4e-48 165.6 0.2 4.5e-44 150.8 0.1 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF52069 - 8.5e-25 87.5 0.5 1.6e-20 73.5 0.1 2.5 3 0 0 3 3 3 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF52069 - 0.0055 15.7 0.1 0.0081 15.1 0.1 1.3 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF52069 - 0.048 13.6 0.7 0.14 12.0 0.1 2.0 2 0 0 2 2 2 0 Phosphotransferase enzyme family PseudoU_synth_2 PF00849.22 ORF50901 - 1.7e-15 57.5 0.0 6.6e-15 55.6 0.0 1.9 1 1 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 ORF50901 - 8.1e-14 51.1 0.0 8.1e-14 51.1 0.0 2.8 3 1 1 4 4 4 1 S4 domain S4_2 PF13275.6 ORF50901 - 0.00094 18.9 0.0 0.0023 17.7 0.0 1.6 1 0 0 1 1 1 1 S4 domain PAP2 PF01569.21 ORF39445 - 5e-05 23.1 7.9 5e-05 23.1 7.9 2.5 2 0 0 2 2 2 1 PAP2 superfamily Ank PF00023.30 ORF37303 - 3.2e-05 24.2 0.1 0.062 13.8 0.0 3.6 3 0 0 3 3 3 1 Ankyrin repeat Ank_2 PF12796.7 ORF37303 - 0.00028 21.4 0.0 0.0032 18.0 0.0 2.5 1 1 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF37303 - 0.00049 20.6 0.2 0.063 13.9 0.2 3.0 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF37303 - 0.0026 18.1 0.2 0.1 13.2 0.0 3.0 2 0 0 2 2 2 1 Ankyrin repeat Ost4 PF10215.9 ORF33740 - 0.2 11.5 0.1 0.36 10.7 0.1 1.4 1 0 0 1 1 1 0 Oligosaccaryltransferase Jacalin PF01419.17 ORF17875 - 1.3e-15 57.5 2.6 1.3e-07 31.7 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain Kinesin PF00225.23 ORF148260 - 3.9e-87 292.3 2.7 6.6e-87 291.5 2.7 1.4 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF148260 - 4.3e-06 26.7 1.0 7e-06 26.0 0.1 1.9 2 0 0 2 2 2 1 Microtubule binding DUF4549 PF15082.6 ORF148260 - 0.0093 15.8 0.6 0.02 14.7 0.6 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4549) Ost4 PF10215.9 ORF140960 - 0.2 11.5 0.1 0.36 10.7 0.1 1.4 1 0 0 1 1 1 0 Oligosaccaryltransferase JIP_LZII PF16471.5 ORF139734 - 0.042 14.0 0.4 0.042 14.0 0.4 2.8 3 0 0 3 3 3 0 JNK-interacting protein leucine zipper II NTS_2 PF15448.6 ORF139734 - 0.31 11.5 2.6 0.94 9.9 0.2 2.8 3 0 0 3 3 3 0 N-terminal segments of P. falciparum erythrocyte membrane protein Pkinase PF00069.25 ORF138880 - 1.4e-48 165.6 0.2 4.5e-44 150.8 0.1 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF138880 - 8.5e-25 87.5 0.5 1.6e-20 73.5 0.1 2.5 3 0 0 3 3 3 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF138880 - 0.0055 15.7 0.1 0.0081 15.1 0.1 1.3 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF138880 - 0.048 13.6 0.7 0.14 12.0 0.1 2.0 2 0 0 2 2 2 0 Phosphotransferase enzyme family Ank_2 PF12796.7 ORF136561 - 3.6e-26 91.6 0.9 4.9e-14 52.7 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF136561 - 2.4e-16 59.9 0.0 4.1e-10 40.0 0.0 2.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF136561 - 9.5e-13 48.0 0.1 9.7e-06 25.8 0.2 3.5 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF136561 - 1.5e-11 43.4 0.0 0.00082 19.6 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF136561 - 4.1e-07 30.1 0.1 0.00027 21.2 0.3 2.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) BTB PF00651.31 ORF133253 - 3.5e-11 43.3 0.0 6.1e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 BTB/POZ domain Skp1_POZ PF03931.15 ORF133253 - 0.052 13.7 1.7 0.059 13.5 0.2 1.9 2 0 0 2 2 2 0 Skp1 family, tetramerisation domain PTS_EIIA_2 PF00359.22 ORF128357 - 4.6e-34 117.4 0.1 2.4e-29 102.1 0.0 2.6 3 0 0 3 3 3 2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PTS-HPr PF00381.19 ORF128357 - 1.9e-26 92.1 1.1 3.7e-25 88.0 0.1 2.8 2 0 0 2 2 2 1 PTS HPr component phosphorylation site Nif11 PF07862.11 ORF128357 - 0.054 13.8 0.1 0.19 12.0 0.1 1.9 1 0 0 1 1 1 0 Nif11 domain OTU PF02338.19 ORF126484 - 2.1e-17 63.8 0.1 4.8e-17 62.6 0.1 1.6 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF126484 - 0.011 15.3 5.8 1.6 8.1 0.0 2.8 2 1 0 2 2 2 0 Peptidase C65 Otubain SEC-C PF02810.15 ORF126484 - 0.088 12.8 10.0 0.17 11.8 10.0 1.5 1 0 0 1 1 1 0 SEC-C motif Chloroa_b-bind PF00504.21 ORF114785 - 2.1e-71 239.7 4.9 1.1e-34 120.3 0.1 2.8 3 0 0 3 3 3 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF114785 - 0.0028 17.9 0.0 7.1 6.9 0.0 3.1 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 ORF114785 - 0.0046 17.3 0.0 6 7.3 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 ORF114785 - 0.011 15.8 0.0 8 6.6 0.0 2.3 2 0 0 2 2 2 0 Hypothetical protein Yopt Glyco_hydro_32C PF08244.12 ORF114785 - 0.034 14.2 0.0 11 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal LAGLIDADG_3 PF14528.6 ORF114785 - 0.18 12.1 0.0 33 4.9 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Sigma_reg_N PF13800.6 ORF111734 - 1.6e-05 25.1 3.7 0.0047 17.2 0.6 2.4 2 0 0 2 2 2 2 Sigma factor regulator N-terminal Srg PF02118.21 ORF111734 - 0.0011 18.7 1.8 0.37 10.4 0.1 2.3 2 0 0 2 2 2 2 Srg family chemoreceptor O-antigen_lig PF13425.6 ORF111734 - 0.0027 16.6 0.9 0.0053 15.6 0.9 1.5 1 0 0 1 1 1 1 O-antigen ligase like membrane protein Shisa PF13908.6 ORF111734 - 0.054 13.7 0.2 0.054 13.7 0.2 3.2 3 1 0 3 3 3 0 Wnt and FGF inhibitory regulator SdpI PF13630.6 ORF111734 - 0.1 12.8 1.6 43 4.3 0.0 3.2 3 0 0 3 3 3 0 SdpI/YhfL protein family Ninjurin PF04923.12 ORF111734 - 0.23 11.4 2.0 0.58 10.1 1.3 1.9 1 1 1 2 2 2 0 Ninjurin Beta-lactamase PF00144.24 ORF1020 - 1.7e-16 60.4 0.0 2.4e-16 59.9 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase Actin PF00022.19 ORF101833 - 3e-123 411.5 0.0 2e-122 408.8 0.0 1.8 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF101833 - 0.013 14.3 0.0 1.5 7.6 0.0 2.3 2 1 0 2 2 2 0 MreB/Mbl protein Actin PF00022.19 ORF101701 - 4.4e-135 450.4 0.0 1.7e-134 448.5 0.0 1.7 1 1 0 1 1 1 1 Actin SPRY PF00622.28 NODE_15634_length_1124_cov_113.807163_g11817_i0reverse_frame_1 - 0.0091 16.1 0.0 0.019 15.1 0.0 1.5 1 0 0 1 1 1 1 SPRY domain ExsD PF16806.5 NODE_15634_length_1124_cov_113.807163_g11817_i0reverse_frame_1 - 0.026 14.5 4.3 0.035 14.0 4.3 1.1 1 0 0 1 1 1 0 Antiactivator protein ExsD Neur_chan_memb PF02932.16 NODE_15634_length_1124_cov_113.807163_g11817_i0reverse_frame_1 - 0.086 12.9 3.6 0.12 12.4 3.6 1.4 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region LMBR1 PF04791.16 NODE_15634_length_1124_cov_113.807163_g11817_i0reverse_frame_1 - 1.2 7.9 3.8 1.4 7.7 3.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein GAGA_bind PF06217.12 NODE_15634_length_1124_cov_113.807163_g11817_i0reverse_frame_1 - 2.7 8.2 15.4 3.6 7.8 15.4 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family Costars PF14705.6 NODE_15500_length_1128_cov_197.279048_g11709_i0reverse_frame_2 - 1.5e-17 63.5 0.3 2.6e-17 62.7 0.3 1.4 1 0 0 1 1 1 1 Costars VHP PF02209.19 NODE_15500_length_1128_cov_197.279048_g11709_i0reverse_frame_2 - 9.3e-16 57.6 1.8 1.7e-15 56.7 1.8 1.5 1 0 0 1 1 1 1 Villin headpiece domain DUF220 PF02713.14 NODE_15500_length_1128_cov_197.279048_g11709_i0reverse_frame_2 - 0.024 14.8 0.0 2.2 8.4 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function DUF220 SHD1 PF03983.12 NODE_15500_length_1128_cov_197.279048_g11709_i0reverse_frame_2 - 0.036 13.9 0.0 4.2 7.2 0.0 2.6 2 0 0 2 2 2 0 SLA1 homology domain 1, SHD1 Peptidase_C1 PF00112.23 ORF98996 - 2.7e-53 181.3 11.8 4.7e-53 180.5 11.8 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF98996 - 4.9e-16 58.9 8.3 6.4e-16 58.5 4.9 2.6 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF2140 PF09911.9 ORF98996 - 0.41 10.2 3.7 0.096 12.2 0.4 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) Actin PF00022.19 ORF91570 - 2.1e-141 471.2 0.0 1.1e-140 468.8 0.0 1.8 1 1 0 1 1 1 1 Actin TPR_2 PF07719.17 ORF90705 - 4.6e-05 23.2 1.8 0.03 14.4 1.1 3.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF90705 - 0.047 13.9 0.3 0.17 12.2 0.3 2.0 1 0 0 1 1 1 0 Tetratricopeptide repeat Xan_ur_permease PF00860.20 ORF88312 - 9.6e-73 245.1 38.9 1.3e-72 244.7 38.9 1.1 1 0 0 1 1 1 1 Permease family AcrZ PF10766.9 ORF88312 - 0.12 11.9 0.2 0.12 11.9 0.2 3.9 4 0 0 4 4 4 0 Multidrug efflux pump-associated protein AcrZ MFS_MOT1 PF16983.5 ORF88312 - 6.1 7.3 36.5 0.12 12.8 5.8 4.3 2 1 2 4 4 4 0 Molybdate transporter of MFS superfamily DUF3333 PF11812.8 ORF88312 - 8.6 6.6 5.6 2 8.6 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3333) TUTF7_u4 PF16631.5 ORF79335 - 3.5 8.3 11.9 4.9 7.9 3.3 2.5 2 0 0 2 2 2 0 Unstructured region 4 on terminal uridylyltransferase 7 Herpes_UL1 PF05259.11 ORF7931 - 0.22 11.6 2.5 0.31 11.1 0.2 2.1 2 0 0 2 2 2 0 Herpesvirus glycoprotein L FAP206 PF12018.8 ORF77413 - 2.7e-71 240.3 1.2 3.7e-71 239.9 1.2 1.2 1 0 0 1 1 1 1 Domain of unknown function LRR_6 PF13516.6 ORF70655 - 0.0071 16.3 12.6 0.14 12.3 0.1 4.4 4 0 0 4 4 4 2 Leucine Rich repeat LRR_1 PF00560.33 ORF70655 - 0.018 15.5 1.1 1.2 9.9 0.1 3.6 3 0 0 3 3 3 0 Leucine Rich Repeat LRR_4 PF12799.7 ORF70655 - 0.13 12.8 12.1 6.1 7.4 0.5 3.3 1 1 2 3 3 3 0 Leucine Rich repeats (2 copies) Ctr PF04145.15 ORF70655 - 1 10.0 7.1 1.8 9.1 0.6 2.4 2 0 0 2 2 2 0 Ctr copper transporter family Sulfotransfer_2 PF03567.14 ORF68991 - 0.019 14.9 0.6 0.029 14.3 0.6 1.3 1 0 0 1 1 1 0 Sulfotransferase family COesterase PF00135.28 ORF67452 - 9.4e-24 84.2 0.0 1.1e-23 83.9 0.0 1.0 1 0 0 1 1 1 1 Carboxylesterase family MgsA_C PF12002.8 ORF67452 - 0.052 13.5 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 MgsA AAA+ ATPase C terminal Actin PF00022.19 ORF67315 - 2.1e-141 471.2 0.0 1.1e-140 468.8 0.0 1.8 1 1 0 1 1 1 1 Actin Sulfotransfer_2 PF03567.14 ORF62422 - 0.019 14.9 0.6 0.029 14.3 0.6 1.3 1 0 0 1 1 1 0 Sulfotransferase family TryThrA_C PF12319.8 ORF61470 - 0.0039 16.7 1.9 0.0096 15.4 1.9 1.6 1 0 0 1 1 1 1 Tryptophan-Threonine-rich plasmodium antigen C terminal DUF1664 PF07889.12 ORF61470 - 0.0093 16.0 1.7 0.0093 16.0 1.7 4.2 2 1 3 5 5 5 1 Protein of unknown function (DUF1664) DUF692 PF05114.13 ORF61470 - 0.023 13.9 1.4 0.42 9.8 0.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF692) DUF1699 PF08004.11 ORF61470 - 0.046 13.4 2.6 0.69 9.6 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1699) Acyl_transf_2 PF02273.15 ORF61470 - 0.072 12.3 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 Acyl transferase DUF3037 PF11236.8 ORF61470 - 0.11 13.0 0.3 0.11 13.0 0.3 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF3037) NPV_P10 PF05531.12 ORF61470 - 0.11 13.0 8.5 7.8 7.1 0.1 5.3 3 3 1 4 4 4 0 Nucleopolyhedrovirus P10 protein Bep_C_terminal PF17841.1 ORF61470 - 0.12 12.6 3.7 3.3 8.0 0.3 3.1 3 0 0 3 3 3 0 BID domain of Bartonella effector protein (Bep) FlaC_arch PF05377.11 ORF61470 - 0.15 12.4 0.2 0.15 12.4 0.2 5.2 5 1 1 6 6 6 0 Flagella accessory protein C (FlaC) MatP PF06303.12 ORF61470 - 0.22 12.1 3.0 0.26 11.8 0.6 2.5 2 0 0 2 2 2 0 MatP N-terminal domain DUF3287 PF11690.8 ORF61470 - 0.37 10.5 4.5 10 5.8 2.0 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3287) EzrA PF06160.12 ORF61470 - 0.43 8.7 14.1 0.013 13.7 5.2 2.3 1 1 0 2 2 2 0 Septation ring formation regulator, EzrA HlyD_2 PF12700.7 ORF61470 - 0.81 8.4 5.4 0.45 9.2 1.7 2.0 2 0 0 2 2 2 0 HlyD family secretion protein Sipho_Gp157 PF05565.11 ORF61470 - 1.2 9.2 14.0 0.32 11.0 1.4 3.6 3 1 1 4 4 4 0 Siphovirus Gp157 Fzo_mitofusin PF04799.13 ORF61470 - 2.2 7.8 27.6 0.87 9.1 1.2 5.7 2 2 4 6 6 6 0 fzo-like conserved region FPP PF05911.11 ORF61470 - 3.7 5.6 37.5 0.045 11.9 13.9 2.2 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil TPR_2 PF07719.17 ORF58483 - 4.6e-05 23.2 1.8 0.03 14.4 1.1 3.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF58483 - 0.047 13.9 0.3 0.17 12.2 0.3 2.0 1 0 0 1 1 1 0 Tetratricopeptide repeat Peptidase_C1 PF00112.23 ORF57392 - 2.7e-53 181.3 11.8 4.7e-53 180.5 11.8 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF57392 - 4.9e-16 58.9 8.3 6.4e-16 58.5 4.9 2.6 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF2140 PF09911.9 ORF57392 - 0.41 10.2 3.7 0.096 12.2 0.4 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) DUF4800 PF16057.5 ORF51599 - 0.17 11.2 0.2 0.32 10.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4800) COesterase PF00135.28 ORF46558 - 9.4e-24 84.2 0.0 1.1e-23 83.9 0.0 1.0 1 0 0 1 1 1 1 Carboxylesterase family MgsA_C PF12002.8 ORF46558 - 0.052 13.5 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 MgsA AAA+ ATPase C terminal PHR PF08005.12 ORF44831 - 1.5e-11 45.2 1.9 1.6e-11 45.1 0.2 1.9 2 0 0 2 2 2 1 PHR domain Sulfotransfer_2 PF03567.14 ORF38438 - 0.019 14.9 0.6 0.029 14.3 0.6 1.3 1 0 0 1 1 1 0 Sulfotransferase family KIAA1430 PF13879.6 ORF37481 - 3.4e-15 56.6 7.3 3.4e-15 56.6 7.3 2.3 3 0 0 3 3 3 1 KIAA1430 homologue Spc24 PF08286.11 ORF37481 - 0.13 12.5 12.5 0.095 13.0 0.7 3.3 3 0 0 3 3 3 0 Spc24 subunit of Ndc80 RPAP1_N PF08621.10 ORF37481 - 0.15 11.9 9.7 1.5 8.7 0.4 3.6 3 1 1 4 4 4 0 RPAP1-like, N-terminal DUF3883 PF13020.6 ORF36923 - 3.5e-22 78.3 2.5 6.4e-22 77.4 2.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3883) WWE PF02825.20 ORF32666 - 0.031 14.8 0.0 0.071 13.7 0.0 1.5 1 0 0 1 1 1 0 WWE domain DNA_pol_viral_C PF00336.18 ORF32554 - 0.0027 17.1 0.0 0.012 15.0 0.0 2.0 2 0 0 2 2 2 1 DNA polymerase (viral) C-terminal domain DUF975 PF06161.11 ORF28776 - 1.8 8.3 8.9 0.1 12.4 3.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF975) Ank_3 PF13606.6 ORF25205 - 4.8e-06 26.5 0.1 0.0052 17.2 0.0 3.7 4 0 0 4 4 4 1 Ankyrin repeat Ank_4 PF13637.6 ORF25205 - 6.4e-06 26.6 0.6 0.02 15.5 0.1 3.8 4 0 0 4 4 4 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF25205 - 7.6e-06 26.4 0.1 0.029 14.9 0.0 3.7 3 1 0 3 3 3 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF25205 - 7.8e-06 26.1 0.0 0.0052 17.1 0.0 3.6 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF25205 - 0.0081 16.6 0.1 1.6 9.3 0.0 3.4 3 0 0 3 3 3 1 Ankyrin repeat zf-LITAF-like PF10601.9 ORF21696 - 2.2e-12 47.1 0.1 2.2e-12 47.1 0.1 1.7 2 0 0 2 2 2 1 LITAF-like zinc ribbon domain zinc_ribbon_2 PF13240.6 ORF21696 - 0.37 10.6 3.9 3 7.7 0.4 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF21696 - 0.53 9.8 2.9 0.37 10.3 0.1 2.0 2 0 0 2 2 2 0 zinc-ribbon domain Actin PF00022.19 ORF21427 - 2.1e-141 471.2 0.0 1.1e-140 468.8 0.0 1.8 1 1 0 1 1 1 1 Actin Peptidase_C1 PF00112.23 ORF19857 - 2.7e-53 181.3 11.8 4.7e-53 180.5 11.8 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF19857 - 4.9e-16 58.9 8.3 6.4e-16 58.5 4.9 2.6 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DUF2140 PF09911.9 ORF19857 - 0.41 10.2 3.7 0.096 12.2 0.4 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) Adap_comp_sub PF00928.21 ORF18157 - 2e-61 207.7 0.6 2.6e-61 207.3 0.6 1.1 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Deltaretro_Tax PF05599.11 ORF18157 - 0.15 12.6 0.0 0.35 11.4 0.0 1.5 1 0 0 1 1 1 0 Deltaretrovirus Tax protein Endonuclease_5 PF04493.14 ORF148387 - 0.036 13.7 0.0 0.073 12.7 0.0 1.4 1 0 0 1 1 1 0 Endonuclease V DUF2207 PF09972.9 ORF148387 - 0.32 9.7 5.6 0.45 9.2 5.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Glyco_trans_2_3 PF13632.6 ORF148387 - 0.53 10.2 5.1 1.1 9.1 5.1 1.5 1 0 0 1 1 1 0 Glycosyl transferase family group 2 Phage_holin_3_6 PF07332.11 ORF148387 - 3.3 7.8 15.8 6.8 6.8 15.8 1.4 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III CUE PF02845.16 ORF147987 - 0.027 14.2 1.2 0.27 11.0 0.2 2.8 3 0 0 3 3 3 0 CUE domain Herpes_UL1 PF05259.11 ORF145643 - 0.22 11.6 2.5 0.31 11.1 0.2 2.1 2 0 0 2 2 2 0 Herpesvirus glycoprotein L BTB PF00651.31 ORF143607 - 3.2e-14 53.1 0.0 6.3e-14 52.2 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain LRR_6 PF13516.6 ORF141445 - 0.0071 16.3 12.6 0.14 12.3 0.1 4.4 4 0 0 4 4 4 2 Leucine Rich repeat LRR_1 PF00560.33 ORF141445 - 0.018 15.5 1.1 1.2 9.9 0.1 3.6 3 0 0 3 3 3 0 Leucine Rich Repeat LRR_4 PF12799.7 ORF141445 - 0.13 12.8 12.1 6.1 7.4 0.5 3.3 1 1 2 3 3 3 0 Leucine Rich repeats (2 copies) Ctr PF04145.15 ORF141445 - 1 10.0 7.1 1.8 9.1 0.6 2.4 2 0 0 2 2 2 0 Ctr copper transporter family BTB PF00651.31 ORF125134 - 3.3e-23 82.0 2.7 9.3e-22 77.4 0.1 2.4 1 1 1 2 2 2 2 BTB/POZ domain Actin PF00022.19 ORF116415 - 2.1e-141 471.2 0.0 1.1e-140 468.8 0.0 1.8 1 1 0 1 1 1 1 Actin Pkinase PF00069.25 ORF114438 - 3.9e-23 82.2 3.0 5.5e-23 81.7 3.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF114438 - 2.6e-08 33.1 0.1 4.5e-08 32.3 0.1 1.4 1 1 0 1 1 1 1 Fungal protein kinase Pkinase_Tyr PF07714.17 ORF114438 - 1.8e-06 27.4 0.3 2.5e-06 27.0 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF114438 - 2.7e-05 23.9 0.3 0.00024 20.8 0.2 2.1 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF114438 - 0.00032 20.1 0.0 0.028 13.7 0.0 2.2 2 0 0 2 2 2 2 Kinase-like DUF3347 PF11827.8 ORF114438 - 0.0057 16.9 0.1 0.011 16.0 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3347) Kdo PF06293.14 ORF114438 - 0.0075 15.6 0.2 0.025 13.9 0.2 1.9 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Omp28 PF11551.8 ORF114438 - 0.11 12.3 0.1 2 8.3 0.0 2.3 2 0 0 2 2 2 0 Outer membrane protein Omp28 DUF3659 PF12396.8 ORF110641 - 0.026 14.5 1.4 0.028 14.3 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) Actin PF00022.19 ORF108629 - 1.4e-141 471.8 0.0 5.7e-141 469.8 0.0 1.7 1 1 0 1 1 1 1 Actin Abhydrolase_1 PF00561.20 ORF101127 - 7.9e-29 101.1 0.2 1.3e-23 83.9 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF101127 - 4e-17 62.3 0.2 1.8e-16 60.2 0.2 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF101127 - 5.2e-14 53.4 0.0 1.4e-13 52.0 0.0 1.6 1 1 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 ORF101127 - 9.5e-07 28.7 0.2 5.1e-06 26.3 0.2 2.0 1 1 0 1 1 1 1 Putative esterase LIDHydrolase PF10230.9 ORF101127 - 4.9e-06 26.3 1.4 2.3e-05 24.1 1.4 1.9 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase DUF915 PF06028.11 ORF101127 - 3.3e-05 23.4 0.1 0.0046 16.3 0.0 2.5 3 0 0 3 3 3 1 Alpha/beta hydrolase of unknown function (DUF915) Thioesterase PF00975.20 ORF101127 - 0.00052 20.2 0.0 0.0021 18.2 0.0 1.9 2 0 0 2 2 2 1 Thioesterase domain Abhydrolase_5 PF12695.7 ORF101127 - 0.0015 18.3 0.0 0.014 15.2 0.0 2.2 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 ORF101127 - 0.0032 17.3 0.1 0.45 10.3 0.1 2.5 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase Ndr PF03096.14 ORF101127 - 0.0071 15.1 0.0 0.015 14.0 0.0 1.5 1 0 0 1 1 1 1 Ndr family Ser_hydrolase PF06821.13 ORF101127 - 0.13 12.1 0.0 0.58 10.0 0.0 1.9 2 0 0 2 2 2 0 Serine hydrolase Pkinase PF00069.25 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 5.5e-40 137.4 0.0 9.8e-40 136.6 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 5.9e-18 65.1 0.0 9.7e-18 64.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Cyclin_N PF00134.23 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 2.8e-08 33.6 0.1 6e-08 32.5 0.1 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain Haspin_kinase PF12330.8 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 0.00074 18.6 0.0 0.0013 17.8 0.0 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 0.0052 16.1 0.0 0.0072 15.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 0.027 13.8 0.0 0.047 13.0 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 NODE_15667_length_1123_cov_3.744485_g11843_i0reverse_frame_3 - 0.14 11.6 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL TPR_MLP1_2 PF07926.12 NODE_15647_length_1123_cov_1329.482537_g11828_i0reverse_frame_3 - 0.00027 21.0 26.6 0.00027 21.0 26.6 4.4 1 1 3 4 4 4 1 TPR/MLP1/MLP2-like protein IL28A PF15177.6 NODE_15647_length_1123_cov_1329.482537_g11828_i0reverse_frame_3 - 0.019 14.8 1.5 0.019 14.8 1.5 2.6 2 1 0 2 2 2 0 Interleukin-28A HalX PF08663.10 NODE_15647_length_1123_cov_1329.482537_g11828_i0reverse_frame_3 - 0.032 14.5 1.1 0.032 14.5 1.1 5.2 5 1 1 6 6 6 0 HalX domain Fimbrial PF00419.20 NODE_15635_length_1124_cov_90.413223_g11818_i0reverse_frame_3 - 0.049 13.9 2.1 0.56 10.5 0.2 2.5 2 0 0 2 2 2 0 Fimbrial protein RNA_pol_A_bac PF01000.26 ORF98734 - 3.2e-20 72.6 0.1 1.5e-19 70.4 0.0 2.0 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 ORF98734 - 4.2e-14 51.7 0.0 7.5e-14 50.9 0.0 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain ETF_QO PF05187.13 ORF98734 - 0.049 13.8 1.3 0.13 12.4 0.4 2.1 2 0 0 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_9 PF13187.6 ORF98734 - 0.053 13.7 1.4 0.053 13.7 1.4 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF98734 - 2.1 9.0 12.0 0.29 11.8 1.9 3.2 3 0 0 3 3 3 0 4Fe-4S dicluster domain AAT PF03417.16 ORF98049 - 9.9e-06 25.4 0.0 1.4e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Glyco_hydro_31 PF01055.26 ORF96074 - 5.3e-64 217.0 2.7 5.3e-64 217.0 2.7 1.6 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF96074 - 0.0016 18.6 0.2 0.0051 17.0 0.2 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Glyco_hydro_31 PF01055.26 ORF94721 - 3.9e-63 214.2 1.0 3.9e-63 214.2 1.0 1.6 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF94721 - 0.0019 18.5 0.2 0.0051 17.0 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Ion_trans PF00520.31 ORF87904 - 1.9e-26 92.8 10.7 2.6e-26 92.4 10.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF87904 - 2.7e-10 39.0 2.3 2.5e-06 26.6 0.0 3.1 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF87904 - 1.1e-08 34.8 0.9 4.4e-05 23.2 0.0 3.5 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF87904 - 1.1e-07 31.1 0.1 0.00089 19.0 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF87904 - 2e-06 28.1 1.0 5.8e-05 23.5 0.0 2.6 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF87904 - 0.078 12.5 0.8 0.7 9.5 0.0 2.6 2 0 0 2 2 2 0 EF hand Asp PF00026.23 ORF87214 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF87214 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF87214 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Glyco_hydro_31 PF01055.26 ORF77583 - 4.7e-66 223.8 2.0 4.7e-66 223.8 2.0 1.6 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF77583 - 0.0019 18.5 0.2 0.0051 17.0 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) CLN3 PF02487.17 ORF66502 - 3.3e-19 69.2 6.2 1.1e-18 67.5 6.2 1.7 1 1 0 1 1 1 1 CLN3 protein PBP1_TM PF14812.6 ORF66267 - 0.00063 20.1 2.3 0.0012 19.2 2.3 1.4 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Aldo_ket_red PF00248.21 ORF64729 - 3.3e-59 200.5 0.0 4e-59 200.2 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Asp PF00026.23 ORF63794 - 1.5e-80 271.0 7.3 1.9e-80 270.6 7.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF63794 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF63794 - 2.9e-05 23.9 0.0 0.0001 22.1 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal DUF551 PF04448.12 ORF59296 - 0.043 14.7 0.2 0.1 13.5 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF551) MRP-L28 PF09812.9 ORF59296 - 2 8.6 3.9 0.65 10.1 1.0 1.6 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L28 Asp PF00026.23 ORF58344 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF58344 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF58344 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Solute_trans_a PF03619.16 ORF43588 - 4.4e-10 39.5 10.2 6.9e-10 38.9 10.2 1.3 1 0 0 1 1 1 1 Organic solute transporter Ostalpha Asp PF00026.23 ORF43181 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF43181 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF43181 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Peptidase_M24 PF00557.24 ORF42324 - 8.2e-49 166.1 0.1 9.9e-49 165.9 0.1 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 zf-C6H2 PF15801.5 ORF42324 - 6.5e-18 64.8 10.0 1.3e-17 63.8 10.0 1.6 1 0 0 1 1 1 1 zf-MYND-like zinc finger, mRNA-binding zf-MYND PF01753.18 ORF42324 - 0.0034 17.4 4.0 0.0034 17.4 4.0 2.1 2 0 0 2 2 2 1 MYND finger Rad21_Rec8 PF04824.16 ORF42144 - 0.011 15.0 0.0 0.021 14.1 0.0 1.3 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein DsrC PF04358.13 ORF38918 - 0.1 13.1 0.0 0.18 12.3 0.0 1.3 1 0 0 1 1 1 0 DsrC like protein Dynamitin PF04912.14 ORF38591 - 1e-25 90.9 23.3 1.4e-25 90.4 23.3 1.3 1 0 0 1 1 1 1 Dynamitin Occludin_ELL PF07303.13 ORF38591 - 0.89 10.3 15.8 8.5 7.2 1.7 4.4 3 2 0 3 3 3 0 Occludin homology domain Uds1 PF15456.6 ORF38591 - 1.7 8.9 16.6 23 5.2 13.4 3.5 1 1 0 2 2 2 0 Up-regulated During Septation HlyD_D23 PF16576.5 ORF36226 - 8.3e-20 70.9 5.9 5.5e-18 65.0 5.9 2.8 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 ORF36226 - 1.4e-15 57.8 0.4 1.9e-12 47.8 0.0 2.9 2 1 1 3 3 3 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 ORF36226 - 2.5e-13 49.6 0.0 2.5e-13 49.6 0.0 3.2 3 0 0 3 3 3 1 Biotin-lipoyl like OEP PF02321.18 ORF36226 - 0.00063 19.6 27.4 0.085 12.7 8.7 2.9 1 1 1 2 2 2 2 Outer membrane efflux protein DUF4407 PF14362.6 ORF36226 - 0.0066 15.8 9.9 0.01 15.2 9.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Biotin_lipoyl PF00364.22 ORF36226 - 0.026 14.4 0.1 0.13 12.1 0.0 2.0 2 0 0 2 2 2 0 Biotin-requiring enzyme HlyD PF00529.20 ORF36226 - 0.14 12.1 4.7 0.6 10.0 4.8 1.9 1 1 0 1 1 1 0 HlyD membrane-fusion protein of T1SS RRP36 PF06102.12 ORF36226 - 0.35 10.8 4.5 0.57 10.1 4.5 1.2 1 0 0 1 1 1 0 rRNA biogenesis protein RRP36 SET PF00856.28 ORF35037 - 9.6e-08 32.6 0.5 5.7e-07 30.1 0.0 2.2 2 1 0 2 2 2 1 SET domain DUF3074 PF11274.8 ORF35037 - 0.011 15.7 0.2 0.021 14.8 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3074) Abhydrolase_1 PF00561.20 ORF30533 - 4e-16 59.4 0.1 3.4e-15 56.4 0.1 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 ORF30533 - 1.2e-13 50.4 0.1 7.4e-13 47.9 0.0 2.3 2 0 0 2 2 2 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 ORF30533 - 4.3e-08 32.7 0.0 0.00016 21.0 0.0 2.4 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF30533 - 0.00045 19.8 0.0 0.0073 15.8 0.0 2.5 3 0 0 3 3 3 1 Prolyl oligopeptidase family FSH1 PF03959.13 ORF30533 - 0.065 12.9 0.0 0.28 10.8 0.0 1.9 2 0 0 2 2 2 0 Serine hydrolase (FSH1) Neur_chan_LBD PF02931.23 ORF29532 - 0.02 14.4 0.5 0.042 13.3 0.5 1.5 1 1 0 1 1 1 0 Neurotransmitter-gated ion-channel ligand binding domain Oxidored_q4 PF00507.19 ORF29532 - 2.9 8.1 7.2 0.12 12.5 0.6 2.0 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PqiA PF04403.13 ORF27976 - 0.0042 16.9 16.2 0.04 13.8 2.5 3.1 2 1 1 3 3 3 3 Paraquat-inducible protein A ABC_tran PF00005.27 ORF22937 - 4.9e-38 130.7 0.0 7.8e-38 130.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF22937 - 3.3e-09 37.0 0.5 0.0014 18.5 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF22937 - 1.3e-08 34.5 0.0 2.2e-08 33.8 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TOBE_3 PF12857.7 ORF22937 - 4.9e-08 32.8 0.0 3.1e-07 30.2 0.0 2.2 1 1 1 2 2 2 1 TOBE-like domain AAA_16 PF13191.6 ORF22937 - 9.6e-05 22.8 0.9 0.00071 20.0 0.9 2.1 1 1 0 1 1 1 1 AAA ATPase domain CysA_C_terminal PF17850.1 ORF22937 - 0.00043 20.8 0.2 0.0021 18.6 0.0 2.3 2 0 0 2 2 1 1 CysA C-terminal regulatory domain NACHT PF05729.12 ORF22937 - 0.0008 19.4 0.4 0.037 14.0 0.1 2.2 2 0 0 2 2 2 1 NACHT domain RsgA_GTPase PF03193.16 ORF22937 - 0.001 19.0 0.1 0.0019 18.1 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase DLIC PF05783.11 ORF22937 - 0.0011 17.9 0.0 0.0018 17.2 0.0 1.2 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA_22 PF13401.6 ORF22937 - 0.0014 18.9 0.2 0.0047 17.2 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 ORF22937 - 0.0014 19.1 0.0 0.013 15.9 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 ORF22937 - 0.0015 18.3 0.0 0.15 11.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain ATPase PF06745.13 ORF22937 - 0.0016 17.8 0.3 1.2 8.4 0.0 2.1 2 0 0 2 2 2 2 KaiC AAA_28 PF13521.6 ORF22937 - 0.0019 18.5 0.1 0.0048 17.1 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF22937 - 0.0035 17.1 0.1 0.0075 16.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF22937 - 0.0036 17.8 0.1 0.0063 17.0 0.1 1.4 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 ORF22937 - 0.006 16.8 0.1 0.066 13.5 0.1 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit TniB PF05621.11 ORF22937 - 0.0072 15.8 0.1 0.34 10.3 0.0 2.3 2 0 0 2 2 2 1 Bacterial TniB protein AAA_30 PF13604.6 ORF22937 - 0.014 15.1 0.0 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 ORF22937 - 0.018 14.5 0.0 1.4 8.4 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein AAA_18 PF13238.6 ORF22937 - 0.034 14.7 0.0 0.084 13.4 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.6 ORF22937 - 0.037 13.6 0.2 0.52 9.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 ORF22937 - 0.038 13.9 0.1 0.24 11.3 0.0 2.0 2 0 0 2 2 2 0 NTPase AAA_33 PF13671.6 ORF22937 - 0.041 14.1 1.9 0.31 11.2 1.9 2.2 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 ORF22937 - 0.045 12.5 0.3 2.5 6.8 0.0 2.7 2 1 0 2 2 2 0 Predicted ATPase of the ABC class TsaE PF02367.17 ORF22937 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRP54 PF00448.22 ORF22937 - 0.09 12.4 0.0 0.26 10.9 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_14 PF13173.6 ORF22937 - 0.11 12.6 0.0 0.75 9.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF22937 - 0.12 12.4 0.3 0.47 10.4 0.0 2.0 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF22937 - 0.13 11.4 0.0 0.24 10.6 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain T2SSE PF00437.20 ORF22937 - 0.13 11.3 0.2 0.88 8.6 0.1 2.0 2 0 0 2 2 2 0 Type II/IV secretion system protein cobW PF02492.19 ORF22937 - 0.14 11.8 0.3 0.31 10.6 0.1 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 ORF22937 - 0.14 12.4 0.0 2.2 8.5 0.0 2.2 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase APS_kinase PF01583.20 ORF22937 - 0.15 11.9 0.2 19 5.1 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase RecA PF00154.21 ORF22937 - 0.16 11.4 0.0 0.27 10.7 0.0 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein PEPCK_ATP PF01293.20 ORF22937 - 0.29 9.8 0.1 5.5 5.5 0.0 2.0 2 0 0 2 2 2 0 Phosphoenolpyruvate carboxykinase PUB PF09409.10 ORF143527 - 1.5e-09 37.7 0.0 3.1e-09 36.6 0.0 1.5 1 0 0 1 1 1 1 PUB domain DUF4050 PF13259.6 ORF143527 - 0.81 10.0 6.7 1.3 9.3 6.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) NPR3 PF03666.13 ORF143527 - 4.4 6.0 8.8 5.5 5.7 8.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 ORF143527 - 6.3 5.4 13.3 8.4 5.0 13.3 1.1 1 0 0 1 1 1 0 Presenilin HemY_N PF07219.13 ORF143527 - 6.6 7.0 9.2 17 5.7 9.2 1.8 1 0 0 1 1 1 0 HemY protein N-terminus Ras PF00071.22 ORF138776 - 2.2e-07 30.6 0.3 1.1e-06 28.4 0.3 2.1 1 1 0 1 1 1 1 Ras family EF_assoc_1 PF08355.12 ORF138776 - 0.0003 20.3 0.0 0.00093 18.8 0.0 1.9 1 0 0 1 1 1 1 EF hand associated Roc PF08477.13 ORF138776 - 0.0007 19.8 0.1 0.0035 17.5 0.1 2.2 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase EF_assoc_2 PF08356.12 ORF138776 - 0.012 15.6 0.1 0.031 14.2 0.1 1.8 1 0 0 1 1 1 0 EF hand associated MMR_HSR1 PF01926.23 ORF138776 - 0.015 15.4 0.0 0.045 13.8 0.0 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase Dynamin_N PF00350.23 ORF138776 - 0.024 14.7 0.0 0.052 13.6 0.0 1.7 1 0 0 1 1 1 0 Dynamin family AAA_16 PF13191.6 ORF138776 - 0.059 13.8 0.0 0.4 11.0 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF138776 - 0.12 12.3 0.2 9.6 6.1 0.0 2.4 1 1 1 2 2 2 0 RsgA GTPase ABC_tran PF00005.27 ORF137537 - 4.9e-38 130.7 0.0 7.8e-38 130.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF137537 - 3.3e-09 37.0 0.5 0.0014 18.5 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF137537 - 1.3e-08 34.5 0.0 2.2e-08 33.8 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain TOBE_3 PF12857.7 ORF137537 - 4.9e-08 32.8 0.0 3.1e-07 30.2 0.0 2.2 1 1 1 2 2 2 1 TOBE-like domain AAA_16 PF13191.6 ORF137537 - 9.6e-05 22.8 0.9 0.00071 20.0 0.9 2.1 1 1 0 1 1 1 1 AAA ATPase domain CysA_C_terminal PF17850.1 ORF137537 - 0.00043 20.8 0.2 0.0021 18.6 0.0 2.3 2 0 0 2 2 1 1 CysA C-terminal regulatory domain NACHT PF05729.12 ORF137537 - 0.0008 19.4 0.4 0.037 14.0 0.1 2.2 2 0 0 2 2 2 1 NACHT domain RsgA_GTPase PF03193.16 ORF137537 - 0.001 19.0 0.1 0.0019 18.1 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase DLIC PF05783.11 ORF137537 - 0.0011 17.9 0.0 0.0018 17.2 0.0 1.2 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA_22 PF13401.6 ORF137537 - 0.0014 18.9 0.2 0.0047 17.2 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 ORF137537 - 0.0014 19.1 0.0 0.013 15.9 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 ORF137537 - 0.0015 18.3 0.0 0.15 11.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain ATPase PF06745.13 ORF137537 - 0.0016 17.8 0.3 1.2 8.4 0.0 2.1 2 0 0 2 2 2 2 KaiC AAA_28 PF13521.6 ORF137537 - 0.0019 18.5 0.1 0.0048 17.1 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF137537 - 0.0035 17.1 0.1 0.0075 16.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF137537 - 0.0036 17.8 0.1 0.0063 17.0 0.1 1.4 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 ORF137537 - 0.006 16.8 0.1 0.066 13.5 0.1 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit TniB PF05621.11 ORF137537 - 0.0072 15.8 0.1 0.34 10.3 0.0 2.3 2 0 0 2 2 2 1 Bacterial TniB protein AAA_30 PF13604.6 ORF137537 - 0.014 15.1 0.0 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 ORF137537 - 0.018 14.5 0.0 1.4 8.4 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein AAA_18 PF13238.6 ORF137537 - 0.034 14.7 0.0 0.084 13.4 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_25 PF13481.6 ORF137537 - 0.037 13.6 0.2 0.52 9.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 ORF137537 - 0.038 13.9 0.1 0.24 11.3 0.0 2.0 2 0 0 2 2 2 0 NTPase AAA_33 PF13671.6 ORF137537 - 0.041 14.1 1.9 0.31 11.2 1.9 2.2 1 1 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 ORF137537 - 0.045 12.5 0.3 2.5 6.8 0.0 2.7 2 1 0 2 2 2 0 Predicted ATPase of the ABC class TsaE PF02367.17 ORF137537 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRP54 PF00448.22 ORF137537 - 0.09 12.4 0.0 0.26 10.9 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_14 PF13173.6 ORF137537 - 0.11 12.6 0.0 0.75 9.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF137537 - 0.12 12.4 0.3 0.47 10.4 0.0 2.0 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 ORF137537 - 0.13 11.4 0.0 0.24 10.6 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain T2SSE PF00437.20 ORF137537 - 0.13 11.3 0.2 0.88 8.6 0.1 2.0 2 0 0 2 2 2 0 Type II/IV secretion system protein cobW PF02492.19 ORF137537 - 0.14 11.8 0.3 0.31 10.6 0.1 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 ORF137537 - 0.14 12.4 0.0 2.2 8.5 0.0 2.2 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase APS_kinase PF01583.20 ORF137537 - 0.15 11.9 0.2 19 5.1 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase RecA PF00154.21 ORF137537 - 0.16 11.4 0.0 0.27 10.7 0.0 1.4 1 0 0 1 1 1 0 recA bacterial DNA recombination protein PEPCK_ATP PF01293.20 ORF137537 - 0.29 9.8 0.1 5.5 5.5 0.0 2.0 2 0 0 2 2 2 0 Phosphoenolpyruvate carboxykinase Mito_carr PF00153.27 ORF135332 - 5.7e-20 71.0 0.0 5e-06 26.4 0.0 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein Pkinase PF00069.25 ORF13097 - 9.5e-63 212.0 0.2 1.1e-62 211.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13097 - 1.5e-41 142.4 0.1 2e-41 142.0 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF13097 - 0.00023 20.6 0.2 0.00094 18.6 0.0 2.0 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF13097 - 0.0037 16.1 0.0 0.0058 15.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Abi_2 PF07751.11 ORF13097 - 0.0037 17.5 0.1 0.01 16.1 0.0 1.7 2 0 0 2 2 2 1 Abi-like protein Seadorna_VP7 PF07387.11 ORF13097 - 0.017 14.2 0.4 0.041 12.9 0.1 1.7 2 0 0 2 2 2 0 Seadornavirus VP7 Haspin_kinase PF12330.8 ORF13097 - 0.02 13.8 0.1 0.036 13.0 0.1 1.6 1 1 0 1 1 1 0 Haspin like kinase domain Methyltransf_5 PF01795.19 ORF129121 - 1e-123 412.8 0.0 1.2e-123 412.6 0.0 1.0 1 0 0 1 1 1 1 MraW methylase family Methyltransf_31 PF13847.6 ORF129121 - 0.0038 17.0 0.0 0.21 11.4 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF129121 - 0.01 16.5 0.0 2.1 9.1 0.0 2.5 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_24 PF13578.6 ORF129121 - 0.019 16.0 0.0 0.58 11.2 0.0 2.4 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF129121 - 0.042 14.5 0.0 6.5 7.5 0.0 2.5 2 0 0 2 2 2 0 Methyltransferase domain Asp PF00026.23 ORF120222 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF120222 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF120222 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal DUF2959 PF11172.8 ORF119474 - 0.0094 16.1 1.0 0.1 12.7 0.0 2.2 1 1 0 2 2 2 1 Protein of unknown function (DUF2959) FadA PF09403.10 ORF119474 - 0.018 15.5 2.5 0.018 15.5 2.5 2.2 2 0 0 2 2 2 0 Adhesion protein FadA Fib_alpha PF08702.10 ORF119474 - 0.085 13.0 3.0 0.2 11.8 2.7 1.7 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 ORF119474 - 0.18 11.4 7.5 0.36 10.3 6.9 1.6 1 1 1 2 2 2 0 Exonuclease VII, large subunit Apolipoprotein PF01442.18 ORF119474 - 0.19 11.6 21.5 1.4 8.7 11.2 2.5 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF119474 - 0.22 11.5 3.3 1.6 8.8 0.2 2.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus FUSC PF04632.12 ORF119474 - 0.23 9.9 12.8 0.37 9.3 12.8 1.4 1 0 0 1 1 1 0 Fusaric acid resistance protein family Spc7 PF08317.11 ORF119474 - 0.3 9.9 14.8 0.28 10.0 4.2 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF87 PF01935.17 ORF119474 - 0.34 11.0 2.4 0.61 10.1 2.3 1.4 1 1 0 1 1 1 0 Helicase HerA, central domain FlaC_arch PF05377.11 ORF119474 - 1.8 9.0 5.6 11 6.5 0.9 3.2 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) XhlA PF10779.9 ORF119474 - 2.6 8.3 6.1 4 7.7 2.3 2.9 2 2 1 3 3 3 0 Haemolysin XhlA COG2 PF06148.11 ORF119474 - 5 7.2 8.5 4.6 7.3 2.2 3.0 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4404 PF14357.6 ORF119474 - 5.2 7.8 13.9 20 5.9 0.9 3.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4404) Laminin_II PF06009.12 ORF119474 - 7.7 6.5 8.2 6.2 6.8 4.6 2.3 1 1 2 3 3 3 0 Laminin Domain II TMPIT PF07851.13 ORF119474 - 8.9 5.5 6.1 6.5 5.9 4.3 1.6 1 1 1 2 2 2 0 TMPIT-like protein TMEM131_like PF12371.8 ORF115001 - 2.4e-06 27.7 1.1 4.3e-06 26.9 0.1 2.0 2 0 0 2 2 2 1 Transmembrane protein 131-like ASH PF15780.5 ORF115001 - 0.021 15.0 0.1 0.066 13.4 0.1 1.8 1 0 0 1 1 1 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Asp PF00026.23 ORF105114 - 3.2e-82 276.5 6.7 3.9e-82 276.2 6.7 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF105114 - 4.1e-11 43.4 3.2 2.8e-09 37.5 3.2 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 ORF105114 - 8.8e-06 25.6 0.0 2.7e-05 24.0 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal NUC194 PF08163.12 NODE_15688_length_1122_cov_4.518859_g11861_i0forward_frame_2 - 0.0052 15.8 10.3 0.0092 15.0 10.3 1.3 1 0 0 1 1 1 1 NUC194 domain DUF5318 PF17249.2 NODE_15688_length_1122_cov_4.518859_g11861_i0forward_frame_2 - 0.099 12.4 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5318) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks41.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks41.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks41.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks41.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Baculo_19 PF04798.12 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_3 - 0.059 13.1 0.1 0.065 13.0 0.1 1.1 1 0 0 1 1 1 0 Baculovirus 19 kDa protein conserved region DUF1453 PF07301.11 NODE_80248_length_197_cov_1.975309_g72307_i0reverse_frame_2 - 0.0065 16.5 3.2 0.0074 16.3 3.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1453) Csm1 PF12539.8 NODE_80248_length_197_cov_1.975309_g72307_i0forward_frame_2 - 0.054 14.1 0.0 0.062 13.9 0.0 1.1 1 0 0 1 1 1 0 Chromosome segregation protein Csm1/Pcs1 CXCXC PF03128.14 NODE_80247_length_197_cov_1.975309_g72306_i0forward_frame_2 - 0.07 13.6 0.2 0.12 12.8 0.2 1.4 1 0 0 1 1 1 0 CXCXC repeat RGS PF00615.19 NODE_80244_length_197_cov_1.987654_g72303_i0reverse_frame_3 - 0.028 14.7 0.6 0.032 14.5 0.6 1.0 1 0 0 1 1 1 0 Regulator of G protein signaling domain Fucokinase PF07959.12 NODE_80244_length_197_cov_1.987654_g72303_i0reverse_frame_3 - 0.081 11.8 0.4 0.092 11.7 0.4 1.0 1 0 0 1 1 1 0 L-fucokinase DUF3963 PF13124.6 NODE_80241_length_197_cov_1.993827_g72300_i0forward_frame_2 - 0.044 13.8 1.5 0.044 13.8 1.5 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3963) Proton_antipo_N PF00662.20 NODE_80231_length_197_cov_2.061728_g72290_i0reverse_frame_2 - 0.058 13.5 0.9 0.078 13.1 0.8 1.4 1 1 1 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Helicase_C PF00271.31 NODE_80228_length_197_cov_2.086420_g72287_i0reverse_frame_2 - 1.1e-16 61.2 0.0 1.1e-16 61.1 0.0 1.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain EamA PF00892.20 NODE_80223_length_197_cov_2.166667_g72282_i0forward_frame_3 - 2.7e-10 40.6 9.4 2.8e-10 40.5 9.4 1.0 1 0 0 1 1 1 1 EamA-like transporter family PUNUT PF16913.5 NODE_80223_length_197_cov_2.166667_g72282_i0forward_frame_3 - 3.1e-05 23.4 8.4 3.4e-05 23.2 8.4 1.0 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport EIID-AGA PF03613.14 NODE_80223_length_197_cov_2.166667_g72282_i0forward_frame_3 - 0.079 12.1 5.7 0.083 12.1 5.7 1.1 1 0 0 1 1 1 0 PTS system mannose/fructose/sorbose family IID component CBP_BcsG PF11658.8 NODE_80223_length_197_cov_2.166667_g72282_i0forward_frame_3 - 3.8 5.8 5.6 4.2 5.6 5.6 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG HlyIII PF03006.20 NODE_80222_length_197_cov_2.179012_g72281_i0forward_frame_3 - 0.012 15.3 0.2 0.014 15.2 0.2 1.0 1 0 0 1 1 1 0 Haemolysin-III related zf-C2H2_11 PF16622.5 NODE_80221_length_197_cov_2.197531_g72280_i0forward_frame_2 - 0.03 14.1 0.3 0.056 13.2 0.3 1.5 1 0 0 1 1 1 0 zinc-finger C2H2-type DUF3716 PF12511.8 NODE_80219_length_197_cov_2.203704_g72278_i0forward_frame_2 - 0.4 10.8 4.1 4.4 7.4 4.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) Phospholamban PF04272.14 NODE_80216_length_197_cov_2.222222_g72275_i0reverse_frame_3 - 0.054 13.0 0.2 0.089 12.3 0.2 1.4 1 0 0 1 1 1 0 Phospholamban DUF412 PF04217.13 NODE_80216_length_197_cov_2.222222_g72275_i0forward_frame_3 - 0.2 11.6 0.5 0.23 11.4 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF412 PyrI_C PF02748.15 NODE_80214_length_197_cov_2.234568_g72273_i0reverse_frame_2 - 0.015 15.2 2.4 0.022 14.7 2.4 1.3 1 0 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF4451 PF14616.6 NODE_80214_length_197_cov_2.234568_g72273_i0reverse_frame_2 - 0.019 15.2 3.1 0.02 15.1 3.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4451) PhnA PF03831.14 NODE_80214_length_197_cov_2.234568_g72273_i0reverse_frame_2 - 0.054 13.4 1.0 0.12 12.3 0.9 1.7 1 1 0 1 1 1 0 PhnA domain FAM86 PF14904.6 NODE_80213_length_197_cov_2.246914_g72272_i0reverse_frame_2 - 0.013 15.6 0.1 0.015 15.4 0.1 1.3 1 1 0 1 1 1 0 Family of unknown function DUF1398 PF07166.11 NODE_80212_length_197_cov_2.283951_g72271_i0forward_frame_2 - 1e-17 64.2 0.0 1.1e-17 64.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1398) CRC_subunit PF08624.10 NODE_80212_length_197_cov_2.283951_g72271_i0forward_frame_2 - 0.003 18.0 0.0 0.0033 17.9 0.0 1.1 1 0 0 1 1 1 1 Chromatin remodelling complex Rsc7/Swp82 subunit DUF1656 PF07869.12 NODE_80210_length_197_cov_2.333333_g72269_i0forward_frame_2 - 0.11 12.5 0.5 0.18 11.8 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1656) MarR PF01047.22 NODE_80209_length_197_cov_2.333333_g72268_i0forward_frame_2 - 1e-07 31.7 0.2 1.8e-07 30.9 0.1 1.5 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 NODE_80209_length_197_cov_2.333333_g72268_i0forward_frame_2 - 1.1e-06 29.1 0.2 1.9e-06 28.3 0.2 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 NODE_80209_length_197_cov_2.333333_g72268_i0forward_frame_2 - 0.00036 20.4 0.5 0.00087 19.1 0.1 1.7 2 0 0 2 2 2 1 MarR family HxlR PF01638.17 NODE_80209_length_197_cov_2.333333_g72268_i0forward_frame_2 - 0.088 12.7 0.1 0.1 12.5 0.1 1.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix cNMP_binding PF00027.29 NODE_80208_length_197_cov_2.351852_g72267_i0reverse_frame_3 - 0.027 14.5 0.0 0.051 13.7 0.0 1.4 2 0 0 2 2 2 0 Cyclic nucleotide-binding domain DUF2229 PF09989.9 NODE_80208_length_197_cov_2.351852_g72267_i0forward_frame_3 - 0.12 12.0 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) Citrus_P18 PF05520.11 NODE_80207_length_197_cov_2.351852_g72266_i0forward_frame_2 - 0.049 13.4 0.1 0.054 13.2 0.1 1.2 1 0 0 1 1 1 0 Citrus tristeza virus P18 protein Swm2 PF17083.5 NODE_80207_length_197_cov_2.351852_g72266_i0forward_frame_2 - 0.068 13.2 0.1 0.071 13.1 0.1 1.1 1 0 0 1 1 1 0 Nucleolar protein Swm2 cNMP_binding PF00027.29 NODE_80204_length_197_cov_2.382716_g72263_i0reverse_frame_2 - 0.085 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain GATase_4 PF13230.6 NODE_80203_length_197_cov_2.388889_g72262_i0reverse_frame_2 - 4.8e-07 28.9 0.2 5.7e-07 28.7 0.2 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II zf-SCNM1 PF15803.5 NODE_80198_length_197_cov_2.500000_g72257_i0reverse_frame_3 - 0.023 14.3 0.1 0.045 13.4 0.1 1.4 1 0 0 1 1 1 0 Zinc-finger of sodium channel modifier 1 Pput2613-deam PF14427.6 NODE_80196_length_197_cov_2.574074_g72255_i0forward_frame_3 - 0.085 12.7 0.2 0.095 12.6 0.2 1.0 1 0 0 1 1 1 0 Pput_2613-like deaminase HELP PF03451.14 NODE_80190_length_197_cov_2.765432_g72249_i0forward_frame_3 - 0.15 11.9 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 HELP motif DUF4096 PF13340.6 NODE_80190_length_197_cov_2.765432_g72249_i0forward_frame_2 - 0.092 13.0 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) DUF1796 PF08795.10 NODE_80188_length_197_cov_2.833333_g72247_i0reverse_frame_2 - 0.14 12.1 0.1 0.17 11.9 0.1 1.1 1 0 0 1 1 1 0 Putative papain-like cysteine peptidase (DUF1796) Glyco_trans_4_3 PF12000.8 NODE_80187_length_197_cov_2.833333_g72246_i0forward_frame_3 - 0.065 12.9 0.2 0.082 12.6 0.2 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 4 group YMF19 PF02326.15 NODE_80187_length_197_cov_2.833333_g72246_i0forward_frame_3 - 9.5 7.1 11.2 0.9 10.4 0.8 2.0 1 1 1 2 2 2 0 Plant ATP synthase F0 DUF892 PF05974.12 NODE_80182_length_197_cov_2.938272_g72241_i0reverse_frame_3 - 8.1e-15 55.2 0.0 8.4e-15 55.1 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF892) PPR_3 PF13812.6 NODE_80182_length_197_cov_2.938272_g72241_i0reverse_frame_3 - 0.055 13.5 0.0 0.073 13.2 0.0 1.2 1 0 0 1 1 1 0 Pentatricopeptide repeat domain BD_b_sandwich PF18820.1 NODE_80180_length_197_cov_3.074074_g72239_i0reverse_frame_3 - 0.033 14.2 0.1 0.036 14.1 0.1 1.1 1 0 0 1 1 1 0 Bdellovibrio Beta-sandwich Npa1 PF11707.8 NODE_80179_length_197_cov_3.092593_g72238_i0forward_frame_3 - 0.036 13.4 0.1 0.038 13.4 0.1 1.0 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal zf-CCCH_4 PF18044.1 NODE_80176_length_197_cov_3.777778_g72235_i0reverse_frame_2 - 0.068 13.0 2.8 0.22 11.4 1.1 2.1 2 0 0 2 2 2 0 CCCH-type zinc finger LPAM_1 PF08139.12 NODE_80175_length_197_cov_3.796296_g72234_i0forward_frame_3 - 0.14 12.7 2.7 0.5 11.0 2.7 1.9 1 1 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Nucleoside_tran PF01733.18 NODE_80174_length_197_cov_3.851852_g72233_i0forward_frame_3 - 0.0026 17.2 1.1 0.0027 17.1 1.1 1.0 1 0 0 1 1 1 1 Nucleoside transporter DUF936 PF06075.12 NODE_80173_length_197_cov_3.901235_g72232_i0reverse_frame_2 - 0.072 12.0 0.0 0.072 12.0 0.0 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) DUF805 PF05656.14 NODE_80167_length_197_cov_7.123457_g72226_i0forward_frame_3 - 0.075 13.5 1.4 0.085 13.3 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF805) DUF4939 PF16297.5 NODE_80165_length_197_cov_7.623457_g72224_i0forward_frame_2 - 0.09 12.7 0.0 0.097 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4939) EZH2_N PF18601.1 NODE_80165_length_197_cov_7.623457_g72224_i0forward_frame_2 - 0.17 12.3 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 EZH2 N-terminal domain TTL PF03133.15 NODE_80161_length_197_cov_13.000000_g72220_i0reverse_frame_3 - 0.056 12.6 0.0 0.068 12.3 0.0 1.1 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family RIH_assoc PF08454.11 NODE_80161_length_197_cov_13.000000_g72220_i0forward_frame_2 - 0.036 13.9 0.1 0.036 13.9 0.1 1.1 1 0 0 1 1 1 0 RyR and IP3R Homology associated RecO_C PF02565.15 NODE_80160_length_197_cov_13.845679_g72219_i0forward_frame_2 - 1.6 8.5 4.5 1.9 8.3 4.5 1.1 1 0 0 1 1 1 0 Recombination protein O C terminal SRI PF08236.11 NODE_80154_length_197_cov_20.135802_g72213_i0forward_frame_3 - 0.0018 18.4 1.8 0.002 18.3 1.8 1.1 1 0 0 1 1 1 1 SRI (Set2 Rpb1 interacting) domain CR6_interact PF10147.9 NODE_80153_length_197_cov_20.506173_g72212_i0reverse_frame_2 - 0.04 13.6 4.5 0.042 13.5 4.5 1.0 1 0 0 1 1 1 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 DUF4710 PF15828.5 NODE_80153_length_197_cov_20.506173_g72212_i0reverse_frame_2 - 2.8 8.1 12.4 3.9 7.7 12.1 1.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4710) SPC12 PF06645.13 NODE_80153_length_197_cov_20.506173_g72212_i0forward_frame_3 - 9.3 6.4 10.9 6.2 7.0 3.4 2.0 1 1 1 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF4710 PF15828.5 NODE_80151_length_197_cov_23.302469_g72210_i0reverse_frame_3 - 0.003 17.6 4.5 0.0035 17.4 4.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4710) IL3Ra_N PF18611.1 NODE_80151_length_197_cov_23.302469_g72210_i0reverse_frame_3 - 0.053 13.5 1.4 0.07 13.1 1.4 1.1 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain DUF2208 PF09973.9 NODE_80151_length_197_cov_23.302469_g72210_i0forward_frame_3 - 0.072 12.7 0.0 0.076 12.6 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) Toxin_8 PF07365.12 NODE_80147_length_197_cov_26.641975_g72206_i0reverse_frame_3 - 0.024 14.8 0.9 0.032 14.4 0.9 1.2 1 0 0 1 1 1 0 Alpha conotoxin precursor DUF346 PF03984.13 NODE_80146_length_197_cov_26.820988_g72205_i0forward_frame_2 - 0.071 12.9 1.5 0.073 12.8 0.1 1.8 3 0 0 3 3 3 0 Repeat of unknown function (DUF346) SieB PF14163.6 NODE_80144_length_197_cov_27.259259_g72203_i0reverse_frame_2 - 2.2 7.7 4.1 2.4 7.6 4.1 1.0 1 0 0 1 1 1 0 Super-infection exclusion protein B DUF4427 PF14468.6 NODE_80140_length_197_cov_31.500000_g72199_i0forward_frame_3 - 0.17 12.0 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4427) Pepdidase_M14_N PF18027.1 NODE_80135_length_197_cov_36.746914_g72194_i0reverse_frame_3 - 0.031 14.6 0.4 0.038 14.3 0.4 1.3 1 1 0 1 1 1 0 Cytosolic carboxypeptidase N-terminal domain NOT2_3_5 PF04153.18 NODE_80133_length_197_cov_40.123457_g72192_i0forward_frame_2 - 0.036 14.2 0.1 0.04 14.0 0.1 1.1 1 0 0 1 1 1 0 NOT2 / NOT3 / NOT5 family DUF1298 PF06974.13 NODE_80132_length_197_cov_40.308642_g72191_i0forward_frame_3 - 0.012 15.6 0.0 0.013 15.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1298) START PF01852.19 NODE_80126_length_197_cov_43.129630_g72185_i0forward_frame_2 - 0.013 14.9 0.0 0.014 14.9 0.0 1.0 1 0 0 1 1 1 0 START domain Optomotor-blind PF11078.8 NODE_80124_length_197_cov_46.432099_g72183_i0forward_frame_3 - 0.074 13.6 0.0 0.087 13.4 0.0 1.1 1 0 0 1 1 1 0 Optomotor-blind protein N-terminal region FAM163 PF15069.6 NODE_80122_length_197_cov_46.858025_g72181_i0forward_frame_3 - 9.8 6.6 10.4 13 6.2 10.4 1.2 1 1 0 1 1 1 0 FAM163 family YdjO PF14169.6 NODE_80117_length_197_cov_50.037037_g72176_i0reverse_frame_2 - 0.16 11.8 3.9 0.085 12.6 2.1 1.5 1 1 0 1 1 1 0 Cold-inducible protein YdjO DUF2285 PF10074.9 NODE_80117_length_197_cov_50.037037_g72176_i0forward_frame_3 - 0.14 12.8 0.0 0.17 12.5 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2285) BRX PF08381.11 NODE_80114_length_197_cov_52.722222_g72173_i0reverse_frame_3 - 0.11 11.9 1.8 0.15 11.4 1.8 1.3 1 1 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 Eno-Rase_FAD_bd PF07055.12 NODE_80114_length_197_cov_52.722222_g72173_i0reverse_frame_3 - 0.16 12.4 0.0 0.19 12.2 0.0 1.1 1 0 0 1 1 1 0 Enoyl reductase FAD binding domain Tombus_P19 PF03220.13 NODE_80113_length_197_cov_54.722222_g72172_i0reverse_frame_3 - 0.086 12.6 0.1 0.086 12.6 0.1 1.0 1 0 0 1 1 1 0 Tombusvirus P19 core protein MKT1_N PF12247.8 NODE_80113_length_197_cov_54.722222_g72172_i0reverse_frame_3 - 0.14 12.6 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Temperature dependent protein affecting M2 dsRNA replication IQ PF00612.27 NODE_80109_length_197_cov_60.376543_g72168_i0reverse_frame_3 - 0.048 13.5 1.7 0.048 13.5 1.7 1.8 2 0 0 2 2 2 0 IQ calmodulin-binding motif DDRGK PF09756.9 NODE_80105_length_197_cov_73.141975_g72164_i0reverse_frame_3 - 6.2 6.4 24.3 7.1 6.2 24.3 1.0 1 0 0 1 1 1 0 DDRGK domain Macoilin PF09726.9 NODE_80104_length_197_cov_74.296296_g72163_i0forward_frame_2 - 4.5 5.7 8.5 4.7 5.7 8.5 1.0 1 0 0 1 1 1 0 Macoilin family C1_2 PF03107.16 NODE_80102_length_197_cov_77.771605_g72161_i0reverse_frame_3 - 0.039 14.3 3.8 0.05 13.9 3.8 1.2 1 0 0 1 1 1 0 C1 domain DDE_3 PF13358.6 NODE_80100_length_197_cov_78.172840_g72159_i0reverse_frame_2 - 0.023 14.4 0.1 0.024 14.4 0.1 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease DND1_DSRM PF14709.7 NODE_80096_length_197_cov_89.623457_g72155_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 double strand RNA binding domain from DEAD END PROTEIN 1 DUF3070 PF11270.8 NODE_80095_length_197_cov_91.166667_g72154_i0reverse_frame_2 - 0.17 12.1 0.1 0.21 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3070) IGPS PF00218.21 NODE_80095_length_197_cov_91.166667_g72154_i0forward_frame_3 - 0.17 11.0 0.0 0.19 10.8 0.0 1.0 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase Complex1_LYR PF05347.15 NODE_80092_length_197_cov_123.919753_g72151_i0forward_frame_2 - 0.21 11.7 0.3 0.21 11.7 0.3 1.5 2 0 0 2 2 2 0 Complex 1 protein (LYR family) zf-SCNM1 PF15803.5 NODE_80090_length_197_cov_135.432099_g72149_i0reverse_frame_2 - 0.037 13.7 0.1 0.18 11.5 0.0 2.0 2 0 0 2 2 2 0 Zinc-finger of sodium channel modifier 1 PARP PF00644.20 NODE_80085_length_197_cov_163.506173_g72144_i0forward_frame_3 - 0.073 12.7 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain CDO_I PF05995.12 NODE_80083_length_197_cov_192.808642_g72142_i0forward_frame_2 - 0.043 13.1 0.1 0.043 13.1 0.1 1.1 1 0 0 1 1 1 0 Cysteine dioxygenase type I Wyosine_form PF08608.12 NODE_80082_length_197_cov_209.376543_g72141_i0forward_frame_2 - 0.021 15.2 0.0 0.025 14.9 0.0 1.2 1 0 0 1 1 1 0 Wyosine base formation DUF2838 PF10998.8 NODE_80081_length_197_cov_228.395062_g72140_i0reverse_frame_3 - 0.023 15.0 1.0 0.026 14.8 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) SR-25 PF10500.9 NODE_80079_length_197_cov_495.574074_g72138_i0reverse_frame_3 - 1.7 8.2 9.3 1.7 8.2 9.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF872 PF05915.12 NODE_80077_length_197_cov_28661.567901_g72136_i0reverse_frame_3 - 0.033 14.3 0.7 0.035 14.3 0.7 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) RNA_pol_Rpb2_3 PF04565.16 NODE_80071_length_198_cov_0.834356_g72130_i0forward_frame_2 - 0.037 14.2 0.1 0.04 14.1 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 3 SHP PF03579.13 NODE_80068_length_198_cov_0.871166_g72127_i0forward_frame_2 - 0.0084 16.1 2.3 0.047 13.7 2.3 1.9 1 1 0 1 1 1 1 Small hydrophobic protein IQ PF00612.27 NODE_80065_length_198_cov_0.889571_g72124_i0forward_frame_2 - 0.089 12.6 0.7 0.27 11.1 0.2 2.0 2 0 0 2 2 2 0 IQ calmodulin-binding motif DUF1091 PF06477.13 NODE_80060_length_198_cov_0.920245_g72119_i0reverse_frame_3 - 0.036 14.6 0.5 0.047 14.2 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1091) TraY PF05509.11 NODE_80057_length_198_cov_0.944785_g72116_i0reverse_frame_2 - 0.18 11.8 0.6 0.3 11.1 0.6 1.5 1 0 0 1 1 1 0 TraY domain TMEM52 PF14979.6 NODE_80056_length_198_cov_0.944785_g72115_i0reverse_frame_3 - 0.34 10.8 4.8 0.36 10.7 4.8 1.0 1 0 0 1 1 1 0 Transmembrane 52 CinA PF02464.17 NODE_80054_length_198_cov_0.963190_g72113_i0forward_frame_2 - 0.0036 16.9 0.0 0.0037 16.8 0.0 1.1 1 0 0 1 1 1 1 Competence-damaged protein TP2 PF01254.18 NODE_80049_length_198_cov_0.975460_g72108_i0reverse_frame_3 - 0.2 12.3 7.7 0.21 12.2 7.7 1.0 1 0 0 1 1 1 0 Nuclear transition protein 2 SR-25 PF10500.9 NODE_80049_length_198_cov_0.975460_g72108_i0reverse_frame_2 - 0.029 14.0 12.1 0.029 14.0 12.1 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3357 PF11837.8 NODE_80048_length_198_cov_0.975460_g72107_i0reverse_frame_3 - 0.37 11.3 1.7 0.43 11.1 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) ECSCR PF15820.5 NODE_80048_length_198_cov_0.975460_g72107_i0reverse_frame_3 - 0.46 10.3 6.9 0.51 10.2 6.9 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Transglut_C PF00927.22 NODE_80048_length_198_cov_0.975460_g72107_i0reverse_frame_2 - 0.077 13.1 0.1 0.094 12.9 0.1 1.1 1 0 0 1 1 1 0 Transglutaminase family, C-terminal ig like domain FSA_C PF10479.9 NODE_80048_length_198_cov_0.975460_g72107_i0forward_frame_3 - 0.16 10.0 2.0 0.16 10.0 2.0 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus SSP160 PF06933.11 NODE_80048_length_198_cov_0.975460_g72107_i0forward_frame_3 - 5.5 5.1 14.8 5 5.2 14.8 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Shisa PF13908.6 NODE_80048_length_198_cov_0.975460_g72107_i0forward_frame_2 - 0.37 11.0 10.2 0.42 10.8 10.2 1.0 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator RNA_polI_A14 PF08203.11 NODE_80047_length_198_cov_0.975460_g72106_i0reverse_frame_3 - 0.13 13.0 0.8 0.15 12.8 0.8 1.1 1 0 0 1 1 1 0 Yeast RNA polymerase I subunit RPA14 zf-C2H2 PF00096.26 NODE_80047_length_198_cov_0.975460_g72106_i0reverse_frame_2 - 0.37 11.3 4.7 1.7 9.3 0.4 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type Presenilin PF01080.17 NODE_80047_length_198_cov_0.975460_g72106_i0forward_frame_2 - 1.7 7.3 5.0 1.7 7.3 5.0 1.0 1 0 0 1 1 1 0 Presenilin EFG_II PF14492.6 NODE_80045_length_198_cov_0.975460_g72104_i0reverse_frame_2 - 2.3e-05 24.4 0.0 3e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Elongation Factor G, domain II Lactamase_B_6 PF16661.5 NODE_80042_length_198_cov_0.975460_g72101_i0reverse_frame_3 - 0.15 11.5 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain DUF908 PF06012.12 NODE_80041_length_198_cov_0.975460_g72100_i0forward_frame_3 - 0.0036 16.8 1.5 0.0042 16.6 1.5 1.0 1 0 0 1 1 1 1 Domain of Unknown Function (DUF908) IBR PF01485.21 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.0026 18.0 5.3 0.0034 17.6 5.3 1.2 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain zf-HC5HC2H PF13771.6 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.026 14.8 6.4 0.033 14.4 6.4 1.1 1 0 0 1 1 1 0 PHD-like zinc-binding domain Prok-RING_4 PF14447.6 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.036 13.9 6.6 1.2 9.1 1.3 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-HC5HC2H_2 PF13832.6 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.054 13.7 6.5 0.067 13.4 6.5 1.1 1 0 0 1 1 1 0 PHD-zinc-finger like domain zinc-ribbons_6 PF07191.12 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.065 13.2 6.0 0.089 12.8 6.0 1.3 1 1 0 1 1 1 0 zinc-ribbons zinc_ribbon_15 PF17032.5 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.19 12.5 7.1 0.28 11.9 7.1 1.3 1 1 0 1 1 1 0 zinc-ribbon family zf-RING_UBOX PF13445.6 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.23 11.5 7.4 0.16 12.0 5.8 1.6 2 0 0 2 2 2 0 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.26 11.2 11.0 0.17 11.8 8.3 2.1 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.27 11.2 11.2 0.28 11.1 8.0 2.3 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 0.97 9.5 10.9 0.56 10.2 2.3 2.5 2 1 0 2 2 2 0 zinc-RING finger domain zf_UBZ PF18439.1 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_3 - 3.4 7.4 8.0 1.4 8.6 1.0 2.5 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger IBR PF01485.21 NODE_80038_length_198_cov_0.981595_g72097_i0forward_frame_2 - 0.0028 17.8 1.2 0.0053 16.9 1.2 1.4 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain PPL4 PF18188.1 NODE_80035_length_198_cov_0.981595_g72094_i0reverse_frame_2 - 0.14 12.1 1.2 0.16 11.9 1.2 1.1 1 0 0 1 1 1 0 Prim-pol 4 Cytochrome_CBB3 PF13442.6 NODE_80032_length_198_cov_0.981595_g72091_i0reverse_frame_2 - 0.09 13.1 0.3 0.095 13.0 0.3 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III DUF3575 PF12099.8 NODE_80031_length_198_cov_0.981595_g72090_i0reverse_frame_3 - 0.23 10.8 0.0 0.23 10.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3575) DUF244 PF03112.14 NODE_80030_length_198_cov_0.981595_g72089_i0reverse_frame_3 - 0.02 14.7 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF ADD_DNMT3 PF17980.1 NODE_80028_length_198_cov_0.981595_g72087_i0reverse_frame_2 - 0.32 11.0 2.6 6.1 6.9 0.1 2.2 2 0 0 2 2 2 0 Cysteine rich ADD domain in DNMT3 ssDBP PF17878.1 NODE_80023_length_198_cov_0.981595_g72082_i0reverse_frame_2 - 0.037 14.2 0.2 0.051 13.8 0.2 1.3 1 0 0 1 1 1 0 Single-stranded DNA-binding protein CarbpepA_inh PF02977.15 NODE_80021_length_198_cov_0.981595_g72080_i0forward_frame_3 - 0.037 13.8 0.7 0.064 13.1 0.7 1.4 1 0 0 1 1 1 0 Carboxypeptidase A inhibitor DEAD PF00270.29 NODE_80019_length_198_cov_0.981595_g72078_i0forward_frame_2 - 7.7e-10 38.8 0.0 7.7e-10 38.8 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase RbpA PF13397.6 NODE_80018_length_198_cov_0.981595_g72077_i0reverse_frame_3 - 0.053 14.1 0.0 0.059 14.0 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase-binding protein DCB PF16213.5 NODE_80017_length_198_cov_0.981595_g72076_i0reverse_frame_3 - 0.025 14.2 0.2 0.028 14.1 0.2 1.1 1 0 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 DUF1658 PF07871.11 NODE_80016_length_198_cov_0.981595_g72075_i0forward_frame_2 - 3.5 7.7 6.8 11 6.2 6.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1658) T4_tail_cap PF11091.8 NODE_80015_length_198_cov_0.981595_g72074_i0reverse_frame_2 - 0.076 11.9 0.0 0.087 11.7 0.0 1.0 1 0 0 1 1 1 0 Tail-tube assembly protein OS-D PF03392.13 NODE_80015_length_198_cov_0.981595_g72074_i0forward_frame_3 - 0.0091 16.1 0.4 0.01 15.9 0.4 1.1 1 0 0 1 1 1 1 Insect pheromone-binding family, A10/OS-D DUF1467 PF07330.12 NODE_80013_length_198_cov_0.981595_g72072_i0forward_frame_3 - 0.047 13.6 0.0 0.052 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1467) RVT_2 PF07727.14 NODE_80011_length_198_cov_0.981595_g72070_i0forward_frame_2 - 4.1e-05 23.4 0.0 4.4e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) WTF PF03303.13 NODE_79998_length_198_cov_1.030675_g72057_i0reverse_frame_2 - 0.098 12.4 0.1 0.098 12.4 0.1 1.1 1 0 0 1 1 1 0 WTF protein HRG PF16954.5 NODE_79995_length_198_cov_1.042945_g72054_i0reverse_frame_3 - 0.045 14.1 4.2 3 8.3 0.4 2.2 2 0 0 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene ATP_synt_H PF05493.13 NODE_79995_length_198_cov_1.042945_g72054_i0reverse_frame_3 - 0.16 12.4 7.9 0.77 10.3 0.5 2.1 1 1 1 2 2 2 0 ATP synthase subunit H DUF4242 PF14026.6 NODE_79994_length_198_cov_1.049080_g72053_i0forward_frame_3 - 0.16 12.2 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4242) ATX_III PF08098.11 NODE_79993_length_198_cov_1.061350_g72052_i0forward_frame_2 - 0.061 13.4 9.0 0.061 13.4 9.0 2.6 2 1 0 2 2 2 0 Anemonia sulcata toxin III family Toxin_23 PF08093.11 NODE_79991_length_198_cov_1.073620_g72050_i0reverse_frame_3 - 0.22 11.7 3.6 0.35 11.1 3.6 1.3 1 0 0 1 1 1 0 Magi 5 toxic peptide family DUF4441 PF14536.6 NODE_79989_length_198_cov_1.092025_g72048_i0forward_frame_2 - 0.039 14.2 0.4 0.057 13.6 0.3 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) DUF2584 PF10763.9 NODE_79989_length_198_cov_1.092025_g72048_i0forward_frame_2 - 0.15 12.2 0.1 0.22 11.7 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF2584) Nucleocap_ssRNA PF11128.8 NODE_79987_length_198_cov_1.098160_g72046_i0forward_frame_2 - 0.0059 16.3 0.1 0.0075 16.0 0.1 1.2 1 0 0 1 1 1 1 Plant viral coat protein nucleocapsid DUF5516 PF17637.2 NODE_79981_length_198_cov_1.116564_g72040_i0forward_frame_3 - 0.43 10.4 6.4 0.24 11.2 1.2 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5516) Phg_2220_C PF09524.10 NODE_79978_length_198_cov_1.122699_g72037_i0forward_frame_3 - 0.053 13.6 0.0 0.072 13.2 0.0 1.2 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) AIRS_C PF02769.22 NODE_79976_length_198_cov_1.134969_g72035_i0forward_frame_3 - 5.4e-07 29.9 0.1 6.1e-07 29.7 0.1 1.0 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Nrap_D4 PF17405.2 NODE_79972_length_198_cov_1.147239_g72031_i0reverse_frame_2 - 0.18 11.1 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 YIF1 PF03878.15 NODE_79967_length_198_cov_1.165644_g72026_i0forward_frame_2 - 0.27 10.7 3.4 0.29 10.6 3.4 1.0 1 0 0 1 1 1 0 YIF1 FeThRed_B PF02943.15 NODE_79966_length_198_cov_1.165644_g72025_i0reverse_frame_3 - 0.2 11.7 1.2 0.27 11.3 1.2 1.2 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain DUF3302 PF11742.8 NODE_79961_length_198_cov_1.177914_g72020_i0forward_frame_3 - 0.028 14.5 0.0 0.034 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3302) YhfH PF14149.6 NODE_79961_length_198_cov_1.177914_g72020_i0forward_frame_2 - 0.026 14.5 0.9 0.026 14.5 0.9 2.0 2 0 0 2 2 2 0 YhfH-like protein Penaeidin PF05927.11 NODE_79958_length_198_cov_1.196319_g72017_i0forward_frame_3 - 0.013 16.2 1.4 0.014 16.2 1.4 1.1 1 0 0 1 1 1 0 Penaeidin lci PF12197.8 NODE_79954_length_198_cov_1.220859_g72013_i0forward_frame_2 - 0.04 13.7 0.2 0.04 13.7 0.2 1.6 2 0 0 2 2 2 0 Bacillus cereus group antimicrobial protein Toxin_13 PF07822.11 NODE_79952_length_198_cov_1.220859_g72011_i0forward_frame_3 - 0.077 13.1 0.0 0.12 12.5 0.0 1.4 1 1 0 1 1 1 0 Neurotoxin B-IV-like protein LytTR PF04397.15 NODE_79951_length_198_cov_1.226994_g72010_i0reverse_frame_2 - 0.047 13.9 0.1 0.064 13.5 0.1 1.3 1 0 0 1 1 1 0 LytTr DNA-binding domain SWIM PF04434.17 NODE_79945_length_198_cov_1.226994_g72004_i0forward_frame_2 - 0.013 15.1 4.3 0.013 15.1 4.3 2.1 2 0 0 2 2 2 0 SWIM zinc finger YpjP PF14005.6 NODE_79937_length_198_cov_1.263804_g71996_i0reverse_frame_2 - 0.033 14.2 2.9 0.037 14.1 2.9 1.0 1 0 0 1 1 1 0 YpjP-like protein SlyX PF04102.12 NODE_79937_length_198_cov_1.263804_g71996_i0reverse_frame_2 - 0.092 13.4 3.0 0.15 12.7 3.0 1.5 1 1 0 1 1 1 0 SlyX DUF501 PF04417.12 NODE_79937_length_198_cov_1.263804_g71996_i0reverse_frame_2 - 0.15 11.8 1.9 0.18 11.6 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF501) CLP1_P PF16575.5 NODE_79936_length_198_cov_1.288344_g71995_i0reverse_frame_2 - 9.5e-05 22.3 0.0 0.0001 22.2 0.0 1.0 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop HalOD2 PF18547.1 NODE_79934_length_198_cov_1.300613_g71993_i0reverse_frame_3 - 0.65 9.9 4.0 6 6.9 0.2 2.1 1 1 1 2 2 2 0 Halobacterial output domain 2 Lamprin PF06403.11 NODE_79934_length_198_cov_1.300613_g71993_i0reverse_frame_2 - 0.076 13.0 0.3 0.076 13.0 0.3 1.1 1 0 0 1 1 1 0 Lamprin zinc_ribbon_11 PF11682.8 NODE_79933_length_198_cov_1.300613_g71992_i0reverse_frame_3 - 0.13 12.2 0.9 0.15 12.1 0.9 1.2 1 0 0 1 1 1 0 Probable zinc-ribbon ODV-E18 PF10717.9 NODE_79932_length_198_cov_1.306748_g71991_i0forward_frame_2 - 1.2 9.1 4.0 1.6 8.7 4.0 1.3 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Iron_permease PF04120.12 NODE_79930_length_198_cov_1.319018_g71989_i0forward_frame_2 - 0.06 13.1 0.2 0.063 13.1 0.2 1.1 1 0 0 1 1 1 0 Low affinity iron permease RAG1_imp_bd PF12560.8 NODE_79927_length_198_cov_1.331288_g71986_i0reverse_frame_3 - 0.12 11.9 2.9 0.13 11.8 2.9 1.0 1 0 0 1 1 1 0 RAG1 importin binding Fer2_3 PF13085.6 NODE_79927_length_198_cov_1.331288_g71986_i0reverse_frame_2 - 0.14 12.2 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF4805 PF16063.5 NODE_79926_length_198_cov_1.337423_g71985_i0reverse_frame_2 - 0.0047 16.3 0.8 0.0051 16.2 0.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4805) DUF1658 PF07871.11 NODE_79923_length_198_cov_1.355828_g71982_i0reverse_frame_2 - 0.11 12.5 0.5 0.27 11.3 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) DUF3561 PF12084.8 NODE_79920_length_198_cov_1.374233_g71979_i0forward_frame_2 - 0.03 14.3 2.6 0.036 14.1 2.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3561) DUF1736 PF08409.11 NODE_79918_length_198_cov_1.398773_g71977_i0reverse_frame_2 - 0.029 14.3 0.9 0.037 14.0 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1736) CDC13_N PF16853.5 NODE_79916_length_198_cov_1.404908_g71975_i0forward_frame_3 - 0.014 15.0 0.2 0.014 14.9 0.2 1.0 1 0 0 1 1 1 0 Cell division control protein 13 N-terminus NinE PF05322.11 NODE_79916_length_198_cov_1.404908_g71975_i0forward_frame_2 - 1.3 8.9 3.9 5.7 6.9 0.1 2.1 2 0 0 2 2 2 0 NINE Protein Herpes_PAP PF03325.13 NODE_79914_length_198_cov_1.417178_g71973_i0reverse_frame_2 - 0.16 11.5 1.8 0.18 11.4 1.8 1.0 1 0 0 1 1 1 0 Herpesvirus polymerase accessory protein Ycf70 PF17382.2 NODE_79914_length_198_cov_1.417178_g71973_i0forward_frame_3 - 0.041 14.3 2.4 0.046 14.1 2.4 1.2 1 0 0 1 1 1 0 Uncharacterized Ycf70-like NGF PF00243.18 NODE_79910_length_198_cov_1.435583_g71969_i0reverse_frame_3 - 0.017 15.4 0.4 0.019 15.2 0.4 1.1 1 0 0 1 1 1 0 Nerve growth factor family Leg1 PF05612.12 NODE_79910_length_198_cov_1.435583_g71969_i0reverse_frame_3 - 0.11 11.6 0.1 0.12 11.5 0.1 1.0 1 0 0 1 1 1 0 Leg1 Phage_TAC_5 PF08890.11 NODE_79900_length_198_cov_1.453988_g71959_i0forward_frame_2 - 0.018 15.0 1.8 0.02 14.9 1.8 1.1 1 0 0 1 1 1 0 Phage XkdN-like tail assembly chaperone protein, TAC HJURP_C PF12347.8 NODE_79898_length_198_cov_1.453988_g71957_i0reverse_frame_3 - 2.1 8.4 8.3 1.8e+02 2.3 8.3 2.0 1 1 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat Ost4 PF10215.9 NODE_79895_length_198_cov_1.460123_g71954_i0reverse_frame_3 - 6 6.8 8.1 1.1 9.2 4.1 1.8 2 0 0 2 2 2 0 Oligosaccaryltransferase DUF1636 PF07845.11 NODE_79892_length_198_cov_1.460123_g71951_i0forward_frame_2 - 0.064 13.7 0.1 0.075 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) DUF835 PF05763.12 NODE_79891_length_198_cov_1.460123_g71950_i0forward_frame_3 - 0.077 12.7 0.2 0.085 12.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF835) Toprim_4 PF13662.6 NODE_79890_length_198_cov_1.460123_g71949_i0reverse_frame_3 - 4.8e-07 30.1 0.0 5.8e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 Toprim domain RecR PF02132.15 NODE_79890_length_198_cov_1.460123_g71949_i0reverse_frame_3 - 6.8e-07 28.8 3.2 1e-06 28.2 3.2 1.3 1 0 0 1 1 1 1 RecR protein DUF1477 PF07346.11 NODE_79890_length_198_cov_1.460123_g71949_i0reverse_frame_3 - 0.0049 17.1 0.2 0.0055 16.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1477) Integrin_alpha PF00357.20 NODE_79889_length_198_cov_1.466258_g71948_i0forward_frame_2 - 0.054 13.5 0.5 0.17 12.0 0.5 1.9 1 0 0 1 1 1 0 Integrin alpha cytoplasmic region Peptidase_S48 PF03574.15 NODE_79888_length_198_cov_1.466258_g71947_i0reverse_frame_3 - 0.18 12.0 0.0 0.19 11.9 0.0 1.0 1 0 0 1 1 1 0 Peptidase family S48 DUF5332 PF17266.2 NODE_79887_length_198_cov_1.466258_g71946_i0forward_frame_2 - 0.012 15.3 2.5 0.017 14.8 2.5 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5332) DUF2650 PF10853.8 NODE_79885_length_198_cov_1.466258_g71944_i0reverse_frame_2 - 0.1 12.3 1.0 0.16 11.7 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) preSET_CXC PF18264.1 NODE_79884_length_198_cov_1.466258_g71943_i0reverse_frame_3 - 0.028 14.9 1.4 0.028 14.9 1.4 2.8 2 1 0 2 2 2 0 CXC domain Ank_2 PF12796.7 NODE_79884_length_198_cov_1.466258_g71943_i0reverse_frame_2 - 0.11 13.0 0.0 0.14 12.8 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Cmc1 PF08583.10 NODE_79882_length_198_cov_1.472393_g71941_i0reverse_frame_3 - 0.081 13.0 0.5 0.3 11.1 0.2 1.9 2 0 0 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like Cytochrom_B558a PF05038.13 NODE_79881_length_198_cov_1.472393_g71940_i0forward_frame_2 - 0.0088 15.6 0.0 0.0096 15.5 0.0 1.0 1 0 0 1 1 1 1 Cytochrome Cytochrome b558 alpha-subunit TEX29 PF15839.5 NODE_79880_length_198_cov_1.472393_g71939_i0forward_frame_2 - 0.0067 17.0 0.2 0.0075 16.8 0.2 1.1 1 0 0 1 1 1 1 Testis-expressed sequence 29 protein DUF3128 PF11326.8 NODE_79879_length_198_cov_1.472393_g71938_i0reverse_frame_3 - 0.0077 16.6 0.3 0.0099 16.2 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3128) Planc_extracel PF07595.12 NODE_79877_length_198_cov_1.472393_g71936_i0forward_frame_2 - 0.078 12.8 0.9 0.078 12.8 0.9 1.6 2 0 0 2 2 2 0 Planctomycete extracellular YajC PF02699.15 NODE_79877_length_198_cov_1.472393_g71936_i0forward_frame_2 - 0.11 12.4 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit FANC_SAP PF18081.1 NODE_79877_length_198_cov_1.472393_g71936_i0forward_frame_2 - 0.15 12.2 0.8 0.18 12.0 0.8 1.1 1 0 0 1 1 1 0 Fanconi anemia-associated nuclease SAP domain DUF2434 PF10361.9 NODE_79876_length_198_cov_1.472393_g71935_i0reverse_frame_3 - 0.055 12.4 0.0 0.059 12.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2434) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks420.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks420.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks420.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks420.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CBM_5_12 PF02839.14 NODE_79866_length_198_cov_1.521472_g71925_i0forward_frame_3 - 0.021 15.4 3.9 0.021 15.4 3.9 2.6 2 2 0 2 2 2 0 Carbohydrate binding domain DUF3770 PF12603.8 NODE_79865_length_198_cov_1.521472_g71924_i0reverse_frame_3 - 0.028 13.9 0.0 0.029 13.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3770) DUF2701 PF10857.8 NODE_79865_length_198_cov_1.521472_g71924_i0reverse_frame_3 - 0.12 12.4 2.3 0.17 12.0 2.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) zf-C2H2 PF00096.26 NODE_79865_length_198_cov_1.521472_g71924_i0forward_frame_3 - 0.026 15.0 0.8 0.026 15.0 0.8 2.7 4 0 0 4 4 4 0 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 NODE_79865_length_198_cov_1.521472_g71924_i0forward_frame_3 - 0.046 14.0 4.1 0.094 13.0 0.5 2.4 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_4 PF13894.6 NODE_79865_length_198_cov_1.521472_g71924_i0forward_frame_3 - 0.053 14.4 0.7 0.053 14.4 0.7 2.9 3 1 0 3 3 3 0 C2H2-type zinc finger zf-C2H2_2 PF12756.7 NODE_79865_length_198_cov_1.521472_g71924_i0forward_frame_3 - 0.13 12.6 6.9 0.15 12.4 6.9 1.1 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) DUF2610 PF11020.8 NODE_79864_length_198_cov_1.533742_g71923_i0reverse_frame_2 - 0.23 11.4 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) BIR PF00653.21 NODE_79862_length_198_cov_1.546012_g71921_i0forward_frame_2 - 0.08 13.6 1.8 0.098 13.3 1.8 1.2 1 0 0 1 1 1 0 Inhibitor of Apoptosis domain TMEM237 PF15383.6 NODE_79859_length_198_cov_1.558282_g71918_i0reverse_frame_2 - 0.017 14.2 0.7 0.018 14.2 0.7 1.0 1 0 0 1 1 1 0 Transmembrane protein 237 OSTMP1 PF09777.9 NODE_79859_length_198_cov_1.558282_g71918_i0forward_frame_3 - 0.019 14.4 0.6 0.022 14.2 0.6 1.0 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor TSP_1 PF00090.19 NODE_79857_length_198_cov_1.558282_g71916_i0forward_frame_2 - 0.27 11.5 4.2 2.6 8.4 0.2 2.2 2 0 0 2 2 2 0 Thrombospondin type 1 domain Bacteriocin_IId PF09221.10 NODE_79853_length_198_cov_1.582822_g71912_i0reverse_frame_2 - 0.063 13.5 4.3 0.084 13.1 4.3 1.2 1 0 0 1 1 1 0 Bacteriocin class IId cyclical uberolysin-like HipA_C PF07804.12 NODE_79850_length_198_cov_1.588957_g71909_i0forward_frame_2 - 0.085 12.5 0.0 0.085 12.5 0.0 1.0 1 0 0 1 1 1 0 HipA-like C-terminal domain DUF3837 PF12939.7 NODE_79845_length_198_cov_1.638037_g71904_i0reverse_frame_2 - 0.094 13.1 0.3 0.16 12.4 0.3 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3837) Porin_3 PF01459.22 NODE_79845_length_198_cov_1.638037_g71904_i0reverse_frame_2 - 0.23 10.9 0.0 0.26 10.7 0.0 1.0 1 0 0 1 1 1 0 Eukaryotic porin Ibs_toxin PF13956.6 NODE_79844_length_198_cov_1.638037_g71903_i0forward_frame_2 - 0.053 13.5 0.5 0.13 12.3 0.5 1.6 1 0 0 1 1 1 0 Toxin Ibs, type I toxin-antitoxin system THDPS_N_2 PF14805.6 NODE_79841_length_198_cov_1.650307_g71900_i0reverse_frame_3 - 0.071 13.3 0.0 0.077 13.2 0.0 1.1 1 0 0 1 1 1 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal DUF4503 PF14951.6 NODE_79839_length_198_cov_1.680982_g71898_i0forward_frame_3 - 0.015 13.8 0.3 0.016 13.7 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4503) Reoviridae_Vp9 PF08978.10 NODE_79839_length_198_cov_1.680982_g71898_i0forward_frame_3 - 0.093 11.9 0.3 0.092 11.9 0.3 1.0 1 0 0 1 1 1 0 Reoviridae VP9 DUF2069 PF09842.9 NODE_79838_length_198_cov_1.687117_g71897_i0reverse_frame_2 - 0.016 15.4 0.0 0.018 15.3 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2069) OTT_1508_deam PF14441.6 NODE_79838_length_198_cov_1.687117_g71897_i0reverse_frame_2 - 1 9.4 6.1 1.8 8.6 3.1 2.1 1 1 1 2 2 2 0 OTT_1508-like deaminase zf-B_box PF00643.24 NODE_79838_length_198_cov_1.687117_g71897_i0reverse_frame_2 - 5.3 7.3 8.8 0.56 10.4 1.2 2.4 3 0 0 3 3 3 0 B-box zinc finger SelK_SelG PF10961.8 NODE_79836_length_198_cov_1.693252_g71895_i0reverse_frame_3 - 0.21 12.2 0.2 0.25 12.0 0.2 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG DUF2985 PF11204.8 NODE_79835_length_198_cov_1.699387_g71894_i0forward_frame_3 - 0.11 12.7 0.7 0.13 12.5 0.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2985) P53 PF00870.18 NODE_79834_length_198_cov_1.699387_g71893_i0reverse_frame_3 - 0.054 13.3 0.1 0.056 13.2 0.1 1.0 1 0 0 1 1 1 0 P53 DNA-binding domain Sarcoglycan_1 PF04790.13 NODE_79834_length_198_cov_1.699387_g71893_i0forward_frame_2 - 1 8.7 3.1 1 8.7 3.1 1.1 1 0 0 1 1 1 0 Sarcoglycan complex subunit protein VESA1_N PF12785.7 NODE_79829_length_198_cov_1.711656_g71888_i0reverse_frame_2 - 0.29 10.0 16.0 0.33 9.9 16.0 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Resistin PF06954.11 NODE_79829_length_198_cov_1.711656_g71888_i0reverse_frame_2 - 7.8 7.1 22.8 9 6.9 22.8 1.1 1 0 0 1 1 1 0 Resistin DUF1249 PF06853.12 NODE_79826_length_198_cov_1.711656_g71885_i0forward_frame_3 - 0.061 13.4 0.1 0.065 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1249) BRX_N PF13713.6 NODE_79823_length_198_cov_1.717791_g71882_i0reverse_frame_3 - 0.14 11.9 0.1 0.27 11.0 0.1 1.4 1 0 0 1 1 1 0 Transcription factor BRX N-terminal domain Acyl_transf_3 PF01757.22 NODE_79823_length_198_cov_1.717791_g71882_i0forward_frame_2 - 0.022 13.9 0.1 0.026 13.6 0.1 1.1 1 0 0 1 1 1 0 Acyltransferase family Ish1 PF10281.9 NODE_79819_length_198_cov_1.736196_g71878_i0forward_frame_2 - 9.4e-05 22.6 0.0 0.00014 22.1 0.0 1.3 1 0 0 1 1 1 1 Putative stress-responsive nuclear envelope protein DivIC PF04977.15 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.0043 16.8 3.2 0.005 16.6 3.2 1.1 1 0 0 1 1 1 1 Septum formation initiator Latarcin PF10279.9 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.0075 16.6 1.3 0.009 16.4 1.3 1.1 1 0 0 1 1 1 1 Latarcin precursor DUF3584 PF12128.8 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.0085 13.7 1.6 0.0087 13.6 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) DUF4061 PF13270.6 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.009 16.3 0.6 0.0099 16.2 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4061) CCDC74_C PF14917.6 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.035 14.6 1.0 0.038 14.5 1.0 1.0 1 0 0 1 1 1 0 Coiled coil protein 74, C terminal FOXP-CC PF16159.5 NODE_79818_length_198_cov_1.754601_g71877_i0reverse_frame_3 - 0.22 12.2 4.5 0.41 11.3 0.5 2.0 1 1 1 2 2 2 0 FOXP coiled-coil domain LZ3wCH PF18517.1 NODE_79815_length_198_cov_1.785276_g71874_i0reverse_frame_2 - 0.24 11.5 0.5 0.4 10.8 0.5 1.4 1 0 0 1 1 1 0 Leucine zipper with capping helix domain DUF4199 PF13858.6 NODE_79813_length_198_cov_1.791411_g71872_i0forward_frame_3 - 0.14 12.6 0.3 0.15 12.5 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) RNHCP PF12647.7 NODE_79812_length_198_cov_1.803681_g71871_i0forward_frame_2 - 0.031 14.2 0.3 0.037 14.0 0.3 1.2 1 0 0 1 1 1 0 RNHCP domain PKD_channel PF08016.12 NODE_79811_length_198_cov_1.803681_g71870_i0reverse_frame_3 - 0.054 12.2 2.3 0.059 12.0 2.3 1.0 1 0 0 1 1 1 0 Polycystin cation channel Gypsy PF07253.11 NODE_79811_length_198_cov_1.803681_g71870_i0forward_frame_2 - 5.5 5.4 7.5 6.4 5.2 7.5 1.0 1 0 0 1 1 1 0 Gypsy protein Toxin_33 PF08121.11 NODE_79807_length_198_cov_1.834356_g71866_i0reverse_frame_2 - 0.036 13.9 0.2 0.036 13.9 0.2 1.7 2 0 0 2 2 2 0 Waglerin family Gliadin PF13016.6 NODE_79807_length_198_cov_1.834356_g71866_i0forward_frame_2 - 0.0057 17.0 0.6 0.0067 16.8 0.6 1.1 1 0 0 1 1 1 1 Cys-rich Gliadin N-terminal DUF1283 PF06932.11 NODE_79806_length_198_cov_1.834356_g71865_i0reverse_frame_3 - 0.0053 16.9 0.3 0.006 16.8 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1283) U1snRNP70_N PF12220.8 NODE_79806_length_198_cov_1.834356_g71865_i0reverse_frame_3 - 0.13 12.9 4.4 0.17 12.6 4.4 1.1 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Cytomega_TRL10 PF06084.11 NODE_79806_length_198_cov_1.834356_g71865_i0reverse_frame_2 - 0.069 13.2 0.4 0.095 12.7 0.4 1.3 1 1 0 1 1 1 0 Cytomegalovirus TRL10 protein DUF3730 PF12530.8 NODE_79805_length_198_cov_1.834356_g71864_i0reverse_frame_3 - 0.12 11.9 0.0 0.2 11.2 0.0 1.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3730) DUF2101 PF09874.9 NODE_79804_length_198_cov_1.840491_g71863_i0reverse_frame_3 - 0.41 10.3 5.7 0.46 10.2 5.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Cir_Bir_Yir PF06022.11 NODE_79804_length_198_cov_1.840491_g71863_i0forward_frame_3 - 0.02 14.4 3.4 0.024 14.2 3.4 1.0 1 0 0 1 1 1 0 Plasmodium variant antigen protein Cir/Yir/Bir Hexapep_2 PF14602.6 NODE_79799_length_198_cov_1.877301_g71858_i0reverse_frame_3 - 0.12 12.2 0.1 0.19 11.5 0.1 1.3 1 0 0 1 1 1 0 Hexapeptide repeat of succinyl-transferase PROL5-SMR PF15621.6 NODE_79796_length_198_cov_1.895706_g71855_i0reverse_frame_3 - 0.1 13.1 0.1 0.13 12.8 0.1 1.2 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Helicase_C PF00271.31 NODE_79796_length_198_cov_1.895706_g71855_i0reverse_frame_2 - 7.5e-09 35.9 0.0 8e-09 35.8 0.0 1.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain FANCI_S2 PF14676.6 NODE_79794_length_198_cov_1.901840_g71853_i0forward_frame_3 - 0.069 13.5 0.8 0.07 13.4 0.8 1.1 1 0 0 1 1 1 0 FANCI solenoid 2 Fam20C PF06702.12 NODE_79794_length_198_cov_1.901840_g71853_i0forward_frame_2 - 0.024 14.5 0.1 0.027 14.3 0.1 1.1 1 0 0 1 1 1 0 Golgi casein kinase, C-terminal, Fam20 COX4 PF02936.14 NODE_79792_length_198_cov_1.914110_g71851_i0reverse_frame_2 - 0.0039 17.2 0.1 0.0041 17.1 0.1 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase subunit IV EAL PF00563.20 NODE_79790_length_198_cov_1.932515_g71849_i0reverse_frame_3 - 4.8e-19 68.8 0.0 5e-19 68.8 0.0 1.0 1 0 0 1 1 1 1 EAL domain zf-MYND PF01753.18 NODE_79786_length_198_cov_1.944785_g71845_i0forward_frame_3 - 0.062 13.4 3.6 0.092 12.9 3.6 1.4 1 0 0 1 1 1 0 MYND finger TBK1_ULD PF18396.1 NODE_79783_length_198_cov_1.950920_g71842_i0reverse_frame_2 - 0.099 12.6 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain Prok-RING_2 PF14445.6 NODE_79783_length_198_cov_1.950920_g71842_i0forward_frame_2 - 0.033 14.4 1.6 0.041 14.1 1.6 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 RNase_P_Rpp14 PF01900.19 NODE_79778_length_198_cov_1.963190_g71837_i0reverse_frame_3 - 0.041 14.1 0.9 0.11 12.7 0.9 1.6 1 1 0 1 1 1 0 Rpp14/Pop5 family PATR PF12951.7 NODE_79778_length_198_cov_1.963190_g71837_i0reverse_frame_2 - 1e-05 25.6 0.1 1.6e-05 24.9 0.1 1.4 1 0 0 1 1 1 1 Passenger-associated-transport-repeat DUF257 PF03192.13 NODE_79776_length_198_cov_1.963190_g71835_i0forward_frame_3 - 0.0093 15.8 0.6 0.01 15.7 0.6 1.0 1 0 0 1 1 1 1 Pyrococcus protein of unknown function, DUF257 ubiquitin PF00240.23 NODE_79775_length_198_cov_1.963190_g71834_i0reverse_frame_2 - 2.4e-11 43.2 0.1 2.7e-11 43.0 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 NODE_79775_length_198_cov_1.963190_g71834_i0reverse_frame_2 - 2.6e-08 33.6 0.4 2.7e-08 33.5 0.4 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 NODE_79775_length_198_cov_1.963190_g71834_i0reverse_frame_2 - 0.075 13.5 0.2 0.34 11.4 0.2 1.8 1 1 0 1 1 1 0 Ubiquitin-like domain YqfD PF06898.11 NODE_79774_length_198_cov_1.969325_g71833_i0forward_frame_2 - 0.56 9.0 2.3 0.67 8.7 2.3 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD PHC2_SAM_assoc PF16616.5 NODE_79770_length_198_cov_1.993865_g71829_i0forward_frame_2 - 0.15 12.9 0.0 0.19 12.6 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on Polyhomeotic-like protein 1 and 2 DUF2650 PF10853.8 NODE_79768_length_198_cov_2.018405_g71827_i0reverse_frame_3 - 4.2 7.2 6.4 31 4.4 6.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2650) IF3_N PF05198.16 NODE_79763_length_198_cov_2.116564_g71822_i0reverse_frame_3 - 0.085 13.1 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Translation initiation factor IF-3, N-terminal domain DUF2774 PF11242.8 NODE_79762_length_198_cov_2.128834_g71821_i0reverse_frame_3 - 0.17 12.1 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) UvsY PF11056.8 NODE_79761_length_198_cov_2.128834_g71820_i0reverse_frame_3 - 0.013 15.8 2.0 0.014 15.7 2.0 1.1 1 0 0 1 1 1 0 Recombination, repair and ssDNA binding protein UvsY SLATT_1 PF18181.1 NODE_79760_length_198_cov_2.184049_g71819_i0forward_frame_3 - 0.011 15.6 0.1 0.012 15.5 0.1 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 DUF4229 PF14012.6 NODE_79760_length_198_cov_2.184049_g71819_i0forward_frame_3 - 0.08 13.1 2.7 0.087 12.9 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) HEPN_RES_NTD1 PF18870.1 NODE_79756_length_198_cov_2.202454_g71815_i0forward_frame_3 - 0.023 14.9 0.1 0.027 14.6 0.1 1.1 1 0 0 1 1 1 0 HEPN/RES N-terminal domain 1 DUF1040 PF06288.13 NODE_79755_length_198_cov_2.208589_g71814_i0reverse_frame_2 - 9.7e-31 106.0 0.5 1e-30 105.9 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) Orthopox_F14 PF06076.12 NODE_79755_length_198_cov_2.208589_g71814_i0reverse_frame_2 - 0.031 14.5 0.6 0.041 14.1 0.1 1.5 2 0 0 2 2 2 0 Orthopoxvirus F14 protein Ribosomal_S14 PF00253.21 NODE_79754_length_198_cov_2.208589_g71813_i0reverse_frame_3 - 0.08 12.7 1.3 0.12 12.1 1.3 1.4 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e DUF1540 PF07561.11 NODE_79753_length_198_cov_2.214724_g71812_i0forward_frame_3 - 0.11 12.8 2.9 0.21 11.9 2.9 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1540) Hormone_5 PF00184.17 NODE_79753_length_198_cov_2.214724_g71812_i0forward_frame_2 - 0.0069 17.2 0.4 0.0083 16.9 0.4 1.3 1 1 0 1 1 1 1 Neurohypophysial hormones, C-terminal Domain FBA_3 PF08268.12 NODE_79752_length_198_cov_2.220859_g71811_i0forward_frame_3 - 0.034 14.1 0.1 0.043 13.8 0.1 1.1 1 0 0 1 1 1 0 F-box associated domain Toxin_6 PF05453.12 NODE_79747_length_198_cov_2.349693_g71806_i0forward_frame_2 - 0.046 14.2 4.4 0.077 13.4 4.4 1.3 1 0 0 1 1 1 0 BmTXKS1/BmP02 toxin family FAM198 PF15051.6 NODE_79746_length_198_cov_2.355828_g71805_i0forward_frame_2 - 0.027 13.4 0.2 0.027 13.4 0.2 1.0 1 0 0 1 1 1 0 FAM198 protein Lamprin PF06403.11 NODE_79744_length_198_cov_2.368098_g71803_i0forward_frame_2 - 0.17 11.8 2.7 0.2 11.6 2.7 1.2 1 0 0 1 1 1 0 Lamprin zf-C2H2_4 PF13894.6 NODE_79743_length_198_cov_2.374233_g71802_i0forward_frame_2 - 0.065 14.1 0.9 0.065 14.1 0.9 1.8 2 0 0 2 2 2 0 C2H2-type zinc finger Cas_Csy4 PF09618.10 NODE_79741_length_198_cov_2.404908_g71800_i0reverse_frame_3 - 0.059 13.5 0.5 0.062 13.4 0.5 1.0 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy4) Adaptin_N PF01602.20 NODE_79740_length_198_cov_2.411043_g71799_i0reverse_frame_3 - 1.5e-06 27.1 0.0 1.5e-06 27.1 0.0 1.0 1 0 0 1 1 1 1 Adaptin N terminal region CNOT1_TTP_bind PF16417.5 NODE_79739_length_198_cov_2.441718_g71798_i0forward_frame_2 - 0.08 12.1 0.0 0.092 11.9 0.0 1.0 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Iron_traffic PF04362.14 NODE_79730_length_198_cov_2.693252_g71789_i0forward_frame_2 - 0.043 13.5 0.0 0.051 13.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial Fe(2+) trafficking Lpp-LpqN PF10738.9 NODE_79729_length_198_cov_2.699387_g71788_i0forward_frame_2 - 0.0014 18.1 0.0 0.0017 17.9 0.0 1.1 1 0 0 1 1 1 1 Probable lipoprotein LpqN DSBA PF01323.20 NODE_79729_length_198_cov_2.699387_g71788_i0forward_frame_2 - 0.0025 17.6 0.1 0.0029 17.4 0.1 1.1 1 0 0 1 1 1 1 DSBA-like thioredoxin domain RCR PF12273.8 NODE_79726_length_198_cov_2.723926_g71785_i0reverse_frame_3 - 0.17 12.6 0.0 0.18 12.5 0.0 1.1 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red Surp PF01805.20 NODE_79721_length_198_cov_2.809816_g71780_i0forward_frame_2 - 1.3e-19 69.9 0.2 1.5e-19 69.7 0.2 1.1 1 0 0 1 1 1 1 Surp module Mobilization_B PF17511.2 NODE_79718_length_198_cov_2.871166_g71777_i0forward_frame_2 - 0.1 12.9 0.5 0.18 12.1 0.4 1.5 1 1 0 1 1 1 0 Mobilization protein B ASC PF00858.24 NODE_79717_length_198_cov_2.914110_g71776_i0reverse_frame_3 - 0.12 11.4 0.0 0.12 11.4 0.0 1.0 1 0 0 1 1 1 0 Amiloride-sensitive sodium channel CBP_BcsO PF17037.5 NODE_79715_length_198_cov_2.969325_g71774_i0reverse_frame_3 - 0.048 13.8 0.3 0.052 13.7 0.3 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsO zf-B_box PF00643.24 NODE_79714_length_198_cov_2.981595_g71773_i0forward_frame_2 - 0.32 11.2 2.4 12 6.2 0.0 2.4 2 1 1 3 3 3 0 B-box zinc finger tRNA-synt_His PF13393.6 NODE_79712_length_198_cov_3.085890_g71771_i0reverse_frame_3 - 4.2e-12 46.0 0.2 4.4e-12 45.9 0.2 1.0 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 NODE_79712_length_198_cov_3.085890_g71771_i0reverse_frame_3 - 2.1e-06 27.8 0.0 2.2e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) zf-Nse PF11789.8 NODE_79710_length_198_cov_3.355828_g71769_i0forward_frame_2 - 0.47 10.3 4.8 1.9 8.4 1.5 2.5 2 1 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit PD40 PF07676.12 NODE_79709_length_198_cov_3.625767_g71768_i0forward_frame_2 - 0.048 13.6 0.1 0.55 10.2 0.0 2.1 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat Rotavirus_VP1 PF12289.8 NODE_79707_length_198_cov_3.711656_g71766_i0forward_frame_2 - 0.037 13.1 0.1 0.043 12.9 0.1 1.0 1 0 0 1 1 1 0 Rotavirus VP1 C-terminal domain DUF2975 PF11188.8 NODE_79699_length_198_cov_20.331288_g71758_i0reverse_frame_3 - 0.59 10.0 8.2 0.63 9.9 8.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) YMF19 PF02326.15 NODE_79699_length_198_cov_20.331288_g71758_i0reverse_frame_3 - 8.6 7.2 11.8 7.4 7.4 11.1 1.3 1 1 0 1 1 1 0 Plant ATP synthase F0 Glyco_hydro_65m PF03632.15 NODE_79683_length_198_cov_33.987730_g71742_i0reverse_frame_3 - 0.1 11.4 0.0 0.1 11.4 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 65 central catalytic domain DUF3165 PF11364.8 NODE_79683_length_198_cov_33.987730_g71742_i0reverse_frame_2 - 0.053 13.9 0.0 0.067 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3165) Qn_am_d_aIV PF09100.10 NODE_79683_length_198_cov_33.987730_g71742_i0forward_frame_3 - 0.092 12.6 0.1 0.092 12.6 0.1 1.1 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV NqrM PF04400.13 NODE_79681_length_198_cov_35.288344_g71740_i0reverse_frame_3 - 0.04 13.7 0.4 0.04 13.7 0.4 2.4 2 1 0 2 2 2 0 (Na+)-NQR maturation NqrM SSP160 PF06933.11 NODE_79681_length_198_cov_35.288344_g71740_i0reverse_frame_3 - 1.6 6.9 6.0 1.7 6.8 6.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 GlcNAc-1_reg PF18440.1 NODE_79680_length_198_cov_35.564417_g71739_i0reverse_frame_2 - 0.099 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative GlcNAc-1 phosphotransferase regulatory domain Herpes_UL16 PF03044.14 NODE_79673_length_198_cov_39.036810_g71732_i0reverse_frame_2 - 0.0059 16.0 1.9 0.0065 15.8 1.9 1.0 1 0 0 1 1 1 1 Herpesvirus UL16/UL94 family SUR7 PF06687.12 NODE_79671_length_198_cov_39.092025_g71730_i0forward_frame_3 - 0.062 12.9 0.1 0.077 12.6 0.1 1.1 1 0 0 1 1 1 0 SUR7/PalI family DUF2997 PF11211.8 NODE_79668_length_198_cov_44.552147_g71727_i0forward_frame_2 - 0.21 11.4 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2997) TGBp3 PF02495.17 NODE_79667_length_198_cov_44.601227_g71726_i0forward_frame_3 - 0.094 12.4 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Triple gene block 3 53-BP1_Tudor PF09038.10 NODE_79664_length_198_cov_46.122699_g71723_i0forward_frame_3 - 0.031 14.2 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 Tumour suppressor p53-binding protein-1 Tudor ETRAMP PF09716.10 NODE_79662_length_198_cov_47.122699_g71721_i0reverse_frame_2 - 0.021 14.9 1.1 0.021 14.9 1.1 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Deltaretro_Tax PF05599.11 NODE_79659_length_198_cov_54.907975_g71718_i0forward_frame_3 - 0.03 14.8 0.3 0.036 14.6 0.3 1.2 1 0 0 1 1 1 0 Deltaretrovirus Tax protein Ldl_recept_a PF00057.18 NODE_79657_length_198_cov_56.018405_g71716_i0forward_frame_2 - 0.38 11.0 4.3 3 8.1 0.6 2.1 1 1 1 2 2 2 0 Low-density lipoprotein receptor domain class A PEPCK_GTP PF00821.18 NODE_79655_length_198_cov_56.398773_g71714_i0reverse_frame_3 - 0.077 11.8 0.0 0.077 11.8 0.0 1.0 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Jak1_Phl PF17887.1 NODE_79653_length_198_cov_58.613497_g71712_i0reverse_frame_3 - 0.011 15.7 0.4 0.011 15.7 0.4 1.0 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain DUF1493 PF07377.12 NODE_79652_length_198_cov_58.650307_g71711_i0reverse_frame_3 - 0.11 13.0 0.1 0.12 12.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1493) DUF2649 PF10854.8 NODE_79649_length_198_cov_63.085890_g71708_i0forward_frame_3 - 0.3 11.4 5.2 0.42 11.0 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2649) BCAS3 PF12490.8 NODE_79648_length_198_cov_63.558282_g71707_i0forward_frame_2 - 0.15 11.5 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 3 DUF4295 PF14128.6 NODE_79638_length_198_cov_89.368098_g71697_i0reverse_frame_2 - 0.21 11.4 0.0 0.35 10.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4295) Bys1 PF04681.12 NODE_79635_length_198_cov_97.619632_g71694_i0reverse_frame_2 - 0.15 12.0 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Blastomyces yeast-phase-specific protein Deltaretro_Tax PF05599.11 NODE_79634_length_198_cov_120.337423_g71693_i0forward_frame_3 - 0.081 13.4 0.4 0.12 12.9 0.4 1.4 1 1 0 1 1 1 0 Deltaretrovirus Tax protein zf-C2H2_7 PF15269.6 NODE_79632_length_198_cov_141.024540_g71691_i0reverse_frame_2 - 0.0033 17.5 1.9 0.0052 16.8 1.9 1.3 1 0 0 1 1 1 1 Zinc-finger Toxin_33 PF08121.11 NODE_79632_length_198_cov_141.024540_g71691_i0reverse_frame_2 - 0.099 12.5 3.3 0.17 11.7 3.3 1.3 1 0 0 1 1 1 0 Waglerin family DUF3246 PF11596.8 NODE_79631_length_198_cov_144.030675_g71690_i0reverse_frame_2 - 0.12 11.7 1.9 0.14 11.6 1.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3246) S-AdoMet_synt_N PF00438.20 NODE_79630_length_198_cov_148.233129_g71689_i0forward_frame_2 - 1.6e-26 92.9 0.6 1.7e-26 92.8 0.6 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain AdoMet_Synthase PF01941.19 NODE_79630_length_198_cov_148.233129_g71689_i0forward_frame_2 - 0.0033 16.3 0.1 0.0036 16.1 0.1 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) Enterotoxin_ST PF02048.16 NODE_79629_length_198_cov_156.680982_g71688_i0forward_frame_3 - 0.029 14.8 0.2 0.044 14.2 0.2 1.3 1 0 0 1 1 1 0 Heat-stable enterotoxin ST Tmemb_170 PF10190.9 NODE_79628_length_198_cov_182.993865_g71687_i0reverse_frame_3 - 0.015 15.6 0.1 0.02 15.2 0.1 1.3 1 1 0 1 1 1 0 Putative transmembrane protein 170 Pex2_Pex12 PF04757.14 NODE_79628_length_198_cov_182.993865_g71687_i0reverse_frame_2 - 0.062 12.9 0.5 0.067 12.8 0.5 1.1 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region TSGP1 PF07771.11 NODE_79627_length_198_cov_184.239264_g71686_i0reverse_frame_3 - 0.014 15.5 0.1 0.019 15.1 0.1 1.2 1 0 0 1 1 1 0 Tick salivary peptide group 1 DUF4312 PF14189.6 NODE_79622_length_198_cov_304.846626_g71681_i0forward_frame_3 - 0.16 11.9 1.0 0.27 11.2 1.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) SUIM_assoc PF16619.5 NODE_79621_length_198_cov_498.993865_g71680_i0reverse_frame_2 - 0.053 13.6 0.1 0.066 13.3 0.1 1.1 1 0 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 CPSase_C PF18302.1 NODE_79613_length_198_cov_4631.006135_g71672_i0forward_frame_3 - 2 9.1 5.8 6.2 7.6 0.1 2.8 3 0 0 3 3 3 0 Carbamoyl phosphate synthetase C-terminal domain EMP70 PF02990.16 NODE_79612_length_198_cov_45371.496933_g71671_i0reverse_frame_3 - 5.7 5.5 15.0 6.2 5.4 15.0 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 RXT2_N PF08595.11 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.13 12.3 6.9 0.14 12.2 6.9 1.1 1 0 0 1 1 1 0 RXT2-like, N-terminal FAM176 PF14851.6 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.35 10.5 5.8 0.38 10.4 5.8 1.1 1 0 0 1 1 1 0 FAM176 family NOA36 PF06524.12 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.87 8.8 13.6 0.87 8.8 13.6 1.0 1 0 0 1 1 1 0 NOA36 protein PBP1_TM PF14812.6 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.95 9.9 13.6 1.1 9.6 13.6 1.2 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal OAD_gamma PF04277.13 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 0.95 10.1 3.7 1.3 9.6 3.7 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF3295 PF11702.8 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 1.8 7.9 12.5 1.9 7.7 12.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) Cwf_Cwc_15 PF04889.12 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 2.2 8.0 15.1 2.2 7.9 15.1 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein TRAP_alpha PF03896.16 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 2.4 7.3 6.0 2.3 7.4 6.0 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Astro_capsid_p PF12226.8 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 2.7 7.0 10.5 2.9 7.0 10.5 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF2457 PF10446.9 NODE_79612_length_198_cov_45371.496933_g71671_i0forward_frame_2 - 6.1 5.9 16.2 5.8 6.0 16.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) TMEM251 PF15190.6 ORF99938 - 0.012 15.5 0.2 0.014 15.4 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 251 HCV_NS5a_C PF12941.7 ORF99175 - 0.1 12.4 1.6 0.12 12.2 1.6 1.0 1 0 0 1 1 1 0 HCV NS5a protein C-terminal region LacI PF00356.21 ORF99086 - 0.74 9.7 5.8 21 5.0 0.3 3.7 2 2 1 3 3 3 0 Bacterial regulatory proteins, lacI family DUF3331 PF11811.8 ORF98988 - 0.033 14.0 0.2 0.036 13.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) Ntox6 PF15544.6 ORF98903 - 0.075 12.6 0.1 0.084 12.4 0.1 1.0 1 0 0 1 1 1 0 Bacterial toxin 6 PH_RBD PF12068.8 ORF98292 - 0.086 12.3 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 Rab-binding domain (RBD) DUF347 PF03988.12 ORF96777 - 0.0016 18.6 0.2 0.002 18.3 0.2 1.0 1 0 0 1 1 1 1 Repeat of Unknown Function (DUF347) MFS_Mycoplasma PF07672.13 ORF96777 - 0.01 15.2 0.0 0.01 15.2 0.0 1.0 1 0 0 1 1 1 0 Mycoplasma MFS transporter CRIM PF16978.5 ORF96777 - 0.011 15.8 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 0 SAPK-interacting protein 1 (Sin1), middle CRIM domain DUF2207 PF09972.9 ORF96777 - 0.012 14.4 0.0 0.012 14.4 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TssO PF17561.2 ORF96777 - 0.042 14.0 0.2 0.051 13.7 0.2 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssO Chordopox_RPO7 PF05864.12 ORF96678 - 0.018 15.3 0.2 0.024 14.9 0.2 1.1 1 0 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) ThrE PF06738.12 ORF96678 - 0.046 13.1 0.2 0.046 13.1 0.2 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter Rimk_N PF18030.1 ORF96660 - 0.055 13.9 0.0 0.055 13.9 0.0 1.2 1 0 0 1 1 1 0 RimK PreATP-grasp domain Arf PF00025.21 ORF96652 - 1.3e-10 41.0 0.1 1.6e-10 40.7 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Fer4_2 PF12797.7 ORF96534 - 0.021 14.9 1.8 2.2 8.5 0.4 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain SLY PF12485.8 ORF96236 - 0.027 15.2 4.8 0.027 15.2 4.8 1.0 1 0 0 1 1 1 0 Lymphocyte signaling adaptor protein ORMDL PF04061.14 ORF95929 - 0.0054 16.5 0.0 0.0058 16.4 0.0 1.1 1 0 0 1 1 1 1 ORMDL family DED PF01335.21 ORF95868 - 0.037 14.3 0.1 0.042 14.2 0.1 1.2 1 0 0 1 1 1 0 Death effector domain YihI PF04220.12 ORF95016 - 0.19 11.5 0.0 0.22 11.3 0.0 1.2 1 0 0 1 1 1 0 Der GTPase activator (YihI) COX7C PF02935.16 ORF94364 - 0.017 15.4 1.1 0.019 15.2 1.1 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc 7TM_GPCR_Srx PF10328.9 ORF94195 - 0.038 13.6 0.5 0.042 13.5 0.5 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srx Amidoligase_2 PF12224.8 ORF93569 - 0.1 12.3 0.0 0.1 12.3 0.0 1.0 1 0 0 1 1 1 0 Putative amidoligase enzyme DUF1296 PF06972.11 ORF9222 - 0.17 12.0 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1296) NMDAR2_C PF10565.9 ORF91878 - 3.5 6.4 6.0 3.8 6.3 6.0 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus PMR5N PF14416.6 ORF91228 - 0.14 12.5 2.4 0.18 12.1 2.4 1.3 1 0 0 1 1 1 0 PMR5 N terminal Domain NRDE-2 PF08424.10 ORF90682 - 0.08 12.0 0.0 0.084 12.0 0.0 1.0 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference DUF2757 PF10955.8 ORF90682 - 0.093 13.0 0.1 0.11 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2757) CBP PF12192.8 ORF90591 - 0.076 13.2 0.0 0.094 12.9 0.0 1.2 1 0 0 1 1 1 0 Fungal calcium binding protein DUF3902 PF13042.6 ORF9052 - 0.0094 15.5 1.1 0.01 15.4 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3902) DUF3810 PF12725.7 ORF9052 - 1 8.7 6.0 1 8.6 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Neur_chan_memb PF02932.16 ORF89896 - 0.021 14.9 0.2 0.026 14.6 0.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Tachystatin_A PF11406.8 ORF89274 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A TerY_C PF15616.6 ORF88619 - 0.12 12.5 2.5 0.13 12.4 2.5 1.0 1 0 0 1 1 1 0 TerY-C metal binding domain MerE PF05052.12 ORF8850 - 0.032 14.1 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 MerE protein DUF2630 PF10944.8 ORF8850 - 0.2 12.1 0.4 0.25 11.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) DUF4658 PF15555.6 ORF885 - 0.078 13.1 0.1 0.081 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) Orthoreo_P10 PF07204.11 ORF88178 - 0.0058 16.6 0.1 0.0062 16.5 0.1 1.2 1 0 0 1 1 1 1 Orthoreovirus membrane fusion protein p10 Pmp3 PF01679.17 ORF88178 - 0.16 12.2 0.4 0.16 12.2 0.4 1.8 2 0 0 2 2 2 0 Proteolipid membrane potential modulator PAP_assoc PF03828.19 ORF88158 - 0.064 13.5 1.6 0.09 13.0 1.6 1.4 1 1 0 1 1 1 0 Cid1 family poly A polymerase DUF4322 PF14210.6 ORF88155 - 0.06 13.2 0.0 0.07 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) Thiolase_C PF02803.18 ORF87966 - 4.2e-27 94.2 1.0 4.6e-27 94.1 1.0 1.0 1 0 0 1 1 1 1 Thiolase, C-terminal domain DHHC PF01529.20 ORF87325 - 0.0013 18.9 3.8 0.0014 18.7 3.8 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase Ferric_reduct PF01794.19 ORF87325 - 0.017 15.3 0.4 0.017 15.3 0.4 1.1 1 0 0 1 1 1 0 Ferric reductase like transmembrane component Pex24p PF06398.11 ORF87325 - 0.087 11.8 3.6 0.095 11.7 3.6 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Clc-like PF07062.12 ORF85794 - 0.35 10.3 4.6 0.41 10.1 4.6 1.1 1 0 0 1 1 1 0 Clc-like Peptidase_U4 PF03419.13 ORF85794 - 0.38 10.0 8.7 0.41 9.9 8.7 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA GPI PF06560.11 ORF85033 - 0.064 12.5 0.0 0.064 12.5 0.0 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) DUF5404 PF17397.2 ORF84955 - 0.12 12.5 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5404) DUF4609 PF15382.6 ORF84763 - 0.16 11.9 0.1 0.54 10.2 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4609) ZYG-11_interact PF05884.12 ORF84619 - 0.086 12.2 1.7 0.093 12.1 1.7 1.0 1 0 0 1 1 1 0 Interactor of ZYG-11 Connexin PF00029.19 ORF84341 - 0.29 10.9 1.6 0.31 10.8 1.6 1.0 1 0 0 1 1 1 0 Connexin FAM176 PF14851.6 ORF84341 - 1.2 8.8 3.9 1.4 8.6 3.9 1.2 1 0 0 1 1 1 0 FAM176 family DUF3464 PF11947.8 ORF84341 - 2.7 7.8 4.8 2.8 7.7 4.8 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 SR-25 PF10500.9 ORF84341 - 4.2 6.9 14.7 4.4 6.9 14.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein GatB_Yqey PF02637.18 ORF84083 - 0.059 13.2 0.0 0.066 13.1 0.0 1.0 1 0 0 1 1 1 0 GatB domain HipN PF18253.1 ORF8390 - 0.0025 17.4 0.1 0.0046 16.6 0.1 1.5 1 0 0 1 1 1 1 Hsp70-interacting protein N N-terminal domain DUF995 PF06191.12 ORF83581 - 0.001 18.8 1.1 0.0012 18.5 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF995) DUF4736 PF15883.5 ORF83477 - 0.54 10.0 2.6 0.6 9.8 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) MTCP1 PF08991.10 ORF82850 - 0.51 10.6 6.0 0.36 11.1 0.4 2.2 1 1 1 2 2 2 0 Mature-T-Cell Proliferation I type DUF935 PF06074.12 ORF82440 - 0.26 10.0 0.3 0.3 9.8 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF935) Inhibitor_I66 PF16850.5 ORF82269 - 0.1 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Peptidase inhibitor I66 DUF3896 PF13035.6 ORF82269 - 0.91 9.7 4.7 7.8 6.7 0.3 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3896) 53-BP1_Tudor PF09038.10 ORF80337 - 0.15 12.0 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Tumour suppressor p53-binding protein-1 Tudor Ac81 PF05820.11 ORF80142 - 0.3 10.7 5.0 0.32 10.5 5.0 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 PIG-U PF06728.13 ORF80016 - 0.006 15.7 1.5 0.0061 15.7 1.5 1.0 1 0 0 1 1 1 1 GPI transamidase subunit PIG-U FXa_inhibition PF14670.6 ORF79886 - 0.2 12.0 3.3 1.1 9.6 3.3 2.0 1 1 0 1 1 1 0 Coagulation Factor Xa inhibitory site Anophelin PF10731.9 ORF79759 - 0.014 15.2 0.0 0.016 15.1 0.0 1.1 1 0 0 1 1 1 0 Thrombin inhibitor from mosquito Orf78 PF06024.12 ORF79740 - 0.0032 17.7 0.1 0.0036 17.6 0.1 1.2 1 0 0 1 1 1 1 Orf78 (ac78) DUF3270 PF11674.8 ORF79740 - 0.55 10.4 6.5 0.67 10.2 6.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) DUF29 PF01724.16 ORF79703 - 0.028 14.6 2.2 0.03 14.5 2.2 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF29 DUF5472 PF17566.2 ORF79460 - 1.1 9.3 3.8 0.81 9.7 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5472) zf-C2H2 PF00096.26 ORF79449 - 4.2e-12 45.8 7.6 2.8e-07 30.6 2.4 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF79449 - 1.2e-07 32.0 6.8 0.00011 22.7 1.9 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF79449 - 4.3e-05 23.8 14.2 0.00021 21.6 0.3 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-met PF12874.7 ORF79449 - 4.8e-05 23.6 4.6 0.0015 18.9 1.4 2.3 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_aberr PF17017.5 ORF79449 - 0.002 18.3 3.1 0.0021 18.3 0.3 1.9 1 1 1 2 2 2 1 Aberrant zinc-finger FOXP-CC PF16159.5 ORF79449 - 0.017 15.7 2.7 0.069 13.8 0.6 2.0 1 1 1 2 2 2 0 FOXP coiled-coil domain zf-C2H2_11 PF16622.5 ORF79449 - 0.03 14.1 2.4 0.049 13.4 2.4 1.3 1 0 0 1 1 1 0 zinc-finger C2H2-type CHORD PF04968.12 ORF79449 - 0.063 14.0 4.2 0.26 12.0 2.6 2.3 1 1 1 2 2 2 0 CHORD zf-C2HE PF16278.5 ORF79449 - 0.067 13.7 1.0 0.067 13.7 1.0 1.6 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2HC_2 PF13913.6 ORF79449 - 0.12 12.3 0.4 0.12 12.3 0.4 2.8 3 1 0 3 3 3 0 zinc-finger of a C2HC-type zf-H2C2_5 PF13909.6 ORF79449 - 0.23 11.2 6.7 0.43 10.4 5.3 2.2 2 1 0 2 2 2 0 C2H2-type zinc-finger domain zf-LYAR PF08790.11 ORF79449 - 0.27 11.2 4.1 2.5 8.1 0.5 2.2 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger zf-C2H2_jaz PF12171.8 ORF79449 - 0.29 11.5 4.9 1.3 9.4 0.2 2.5 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-BED PF02892.15 ORF79449 - 0.62 10.1 7.2 0.75 9.9 1.9 2.2 1 1 1 2 2 2 0 BED zinc finger zf-C2H2_6 PF13912.6 ORF79449 - 1.6 8.8 10.9 2.4 8.3 4.5 2.8 2 1 0 2 2 2 0 C2H2-type zinc finger FPL PF09758.9 ORF78653 - 0.013 15.5 2.8 0.014 15.4 2.8 1.0 1 0 0 1 1 1 0 Uncharacterised conserved protein NitrOD5 PF11537.8 ORF78653 - 0.096 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Nitrosopumilus output domain 5 Arena_ncap_C PF17290.2 ORF78561 - 0.055 12.8 0.4 0.06 12.7 0.4 1.0 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain HlyD_D23 PF16576.5 ORF78561 - 0.072 12.3 0.2 0.072 12.3 0.2 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Arena_ncap_C PF17290.2 ORF78161 - 0.055 12.8 0.4 0.06 12.7 0.4 1.0 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain HlyD_D23 PF16576.5 ORF78161 - 0.072 12.3 0.2 0.072 12.3 0.2 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion TNFR_c6 PF00020.18 ORF78143 - 1.3 9.4 8.3 1.4 9.3 0.6 2.3 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region zf-UBP PF02148.19 ORF78143 - 1.8 8.9 8.4 16 5.9 8.4 2.0 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein zf-RanBP PF00641.18 ORF78143 - 6.5 6.2 13.1 0.76 9.2 6.4 2.5 3 0 0 3 3 3 0 Zn-finger in Ran binding protein and others Hyr1 PF15789.5 ORF77835 - 0.012 15.1 1.0 0.022 14.3 1.0 1.4 1 0 0 1 1 1 0 Hyphally regulated cell wall GPI-anchored protein 1 Chlorophyllase2 PF12740.7 ORF76270 - 0.12 11.3 0.1 0.14 11.1 0.1 1.0 1 0 0 1 1 1 0 Chlorophyllase enzyme Fumarate_red_D PF02313.17 ORF74723 - 0.11 12.6 1.2 0.11 12.6 1.2 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit D Fer4_2 PF12797.7 ORF7464 - 0.021 14.9 1.8 2.2 8.5 0.4 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain KH_dom-like PF14714.6 ORF74485 - 0.018 15.3 0.1 0.023 15.0 0.1 1.1 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RWP-RK PF02042.15 ORF7426 - 0.011 15.7 0.7 0.015 15.3 0.7 1.3 1 0 0 1 1 1 0 RWP-RK domain DUF4131 PF13567.6 ORF74241 - 1.8 8.2 3.9 2 8.0 3.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) HoxA13_N PF12284.8 ORF73734 - 0.095 13.3 0.1 0.12 13.0 0.1 1.2 1 0 0 1 1 1 0 Hox protein A13 N terminal HTH_18 PF12833.7 ORF73612 - 7.9e-07 29.3 0.0 9.1e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF73612 - 1.2e-06 28.4 0.0 1.7e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family Terminase_5 PF06056.12 ORF73612 - 0.011 15.6 0.0 0.027 14.4 0.0 1.6 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) LytR_cpsA_psr PF03816.14 ORF73612 - 0.14 12.3 0.0 0.14 12.3 0.0 1.0 1 0 0 1 1 1 0 Cell envelope-related transcriptional attenuator domain DUF995 PF06191.12 ORF72400 - 0.001 18.8 1.1 0.0012 18.5 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF995) DUF2750 PF11042.8 ORF71890 - 0.13 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2750) Defensin_4 PF07936.12 ORF71815 - 0.061 13.2 0.4 0.079 12.8 0.4 1.2 1 0 0 1 1 1 0 Potassium-channel blocking toxin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks421.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks421.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks421.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks421.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:40:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zf-LSD1 PF06943.12 ORF70125 - 1 9.3 3.8 1.5 8.7 0.1 2.5 2 1 0 2 2 2 0 LSD1 zinc finger HJURP_mid PF12346.8 ORF7000 - 0.18 12.3 3.3 0.19 12.2 3.3 1.1 1 0 0 1 1 1 0 Holliday junction recognition protein-associated repeat TPR_2 PF07719.17 ORF69915 - 0.006 16.6 0.5 0.012 15.6 0.1 1.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF69915 - 0.13 12.7 0.5 0.21 12.1 0.0 1.8 2 1 0 2 2 2 0 Tetratricopeptide repeat NR_Repeat PF14046.6 ORF6930 - 0.3 11.3 3.5 7 6.9 1.4 2.3 1 1 1 2 2 2 0 Nuclear receptor repeat MrpF_PhaF PF04066.13 ORF68859 - 0.26 11.7 2.8 0.32 11.4 2.8 1.1 1 0 0 1 1 1 0 Multiple resistance and pH regulation protein F (MrpF / PhaF) CYSTM PF12734.7 ORF68853 - 0.1 12.9 3.1 0.22 11.9 3.1 1.6 1 0 0 1 1 1 0 Cysteine-rich TM module stress tolerance DUF2374 PF09574.10 ORF68758 - 0.16 11.8 0.4 0.3 11.0 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (Duf2374) Tachystatin_A PF11406.8 ORF68592 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A DUF5472 PF17566.2 ORF68291 - 1.1 9.3 3.8 0.81 9.7 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5472) DUF2682 PF10909.8 ORF67839 - 0.053 14.0 0.2 0.069 13.6 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2682) DUF4209 PF13910.6 ORF67641 - 0.074 13.3 1.7 4.4 7.6 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4209) DUF4805 PF16063.5 ORF67293 - 0.2 11.0 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4805) DUF5552 PF17706.1 ORF66940 - 0.059 13.1 0.1 0.059 13.1 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5552) DUF3039 PF11238.8 ORF65265 - 0.19 11.5 1.6 0.35 10.7 1.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3039) Polyoma_agno PF01736.16 ORF65265 - 0.46 10.2 4.2 3.8 7.3 0.2 2.1 2 0 0 2 2 2 0 Polyomavirus agnoprotein FAM70 PF14967.6 ORF64769 - 0.091 12.2 0.1 0.1 12.1 0.1 1.0 1 0 0 1 1 1 0 FAM70 protein EVC2_like PF12297.8 ORF64258 - 0.08 11.6 0.2 0.085 11.5 0.2 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein TauE PF01925.19 ORF63025 - 1.8e-06 27.8 1.5 1.9e-06 27.7 1.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF4513 PF14983.6 ORF62989 - 0.041 14.0 0.2 0.048 13.7 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4513) FSH1 PF03959.13 ORF62983 - 0.038 13.7 0.1 0.041 13.5 0.1 1.0 1 0 0 1 1 1 0 Serine hydrolase (FSH1) LRR_3 PF07725.12 ORF62541 - 0.11 12.4 0.1 0.66 9.9 0.0 2.1 2 0 0 2 2 2 0 Leucine Rich Repeat Fer4_10 PF13237.6 ORF62071 - 0.0003 20.8 2.5 0.00037 20.5 2.5 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF62071 - 0.053 14.5 4.7 0.17 12.9 0.3 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Folliculin PF11704.8 ORF61800 - 0.041 13.8 0.2 0.048 13.5 0.2 1.0 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport DUF1966 PF09260.11 ORF61702 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1966) GST_C_3 PF14497.6 ORF61576 - 0.04 14.1 0.1 0.051 13.8 0.1 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain TRI5 PF06330.11 ORF61564 - 0.07 12.0 0.3 0.071 12.0 0.3 1.0 1 0 0 1 1 1 0 Trichodiene synthase (TRI5) DSPc PF00782.20 ORF60708 - 1.4e-05 25.0 0.1 2e-05 24.4 0.1 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain DUF3805 PF12712.7 ORF60558 - 0.07 13.3 0.0 0.07 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3805) zf-RING_11 PF17123.5 ORF60155 - 0.036 13.8 0.1 0.071 12.9 0.1 1.5 1 0 0 1 1 1 0 RING-like zinc finger DEAD PF00270.29 ORF60038 - 2.4e-14 53.5 0.1 2.5e-14 53.4 0.1 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase Tachystatin_A PF11406.8 ORF58758 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A GMP_PDE_delta PF05351.11 ORF57264 - 4.6e-10 39.8 0.0 4.6e-09 36.5 0.0 1.9 1 1 0 1 1 1 1 GMP-PDE, delta subunit Thiol_cytolys_C PF17440.2 ORF57264 - 0.0078 16.4 0.1 0.0096 16.1 0.1 1.1 1 0 0 1 1 1 1 Thiol-activated cytolysin beta sandwich domain HEPN_Cthe2314 PF18730.1 ORF57034 - 0.0037 17.3 0.3 0.0037 17.3 0.3 1.1 1 0 0 1 1 1 1 Cthe_2314-like HEPN DUF4716 PF15837.5 ORF56673 - 0.002 18.1 0.6 0.0023 18.0 0.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4716) BioT2 PF15368.6 ORF56231 - 0.099 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis family BioT2 Phage_connector PF05352.12 ORF56231 - 0.11 11.9 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Phage Connector (GP10) YceG_bac PF14266.6 ORF55774 - 0.06 12.3 0.1 0.1 11.5 0.0 1.4 1 1 1 2 2 2 0 Putative component of 'biosynthetic module' KIP1 PF07765.12 ORF55774 - 0.14 12.3 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 KIP1-like protein DUF4762 PF15959.5 ORF55319 - 0.032 14.2 0.1 0.047 13.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4762) NinB PF05772.12 ORF54984 - 0.0088 15.9 0.2 0.0096 15.7 0.2 1.1 1 0 0 1 1 1 1 NinB protein PARG_cat PF05028.14 ORF54984 - 0.044 13.1 0.3 0.048 12.9 0.3 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) HCV_NS5a_C PF12941.7 ORF54743 - 0.1 12.4 1.6 0.12 12.2 1.6 1.0 1 0 0 1 1 1 0 HCV NS5a protein C-terminal region Wound_ind PF08186.11 ORF5472 - 0.49 10.9 4.4 3.2 8.2 0.8 2.1 2 0 0 2 2 2 0 Wound-inducible basic protein family TMEM208_SND2 PF05620.11 ORF5472 - 1.8 8.3 11.3 2.2 8.0 11.3 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 zf-C2H2 PF00096.26 ORF54302 - 1.7e-12 47.0 5.7 1.3e-07 31.6 1.3 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF54302 - 2.1e-08 34.3 5.3 4.5e-05 23.9 1.0 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF54302 - 5.2e-06 26.6 0.6 5.2e-06 26.6 0.6 3.1 3 0 0 3 3 3 1 Zinc-finger double domain zf-met PF12874.7 ORF54302 - 0.00018 21.7 2.6 0.011 16.2 0.4 2.3 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 ORF54302 - 0.011 15.7 8.6 0.016 15.2 2.4 2.5 2 1 0 2 2 2 0 C2H2-type zinc finger zf-BED PF02892.15 ORF54302 - 0.024 14.7 7.0 0.61 10.1 2.9 2.2 1 1 1 2 2 2 0 BED zinc finger zf-C2HC_2 PF13913.6 ORF54302 - 0.026 14.4 3.8 0.65 10.0 0.5 2.5 2 0 0 2 2 2 0 zinc-finger of a C2HC-type FOXP-CC PF16159.5 ORF54302 - 0.033 14.8 1.9 0.15 12.7 1.9 1.9 1 1 0 1 1 1 0 FOXP coiled-coil domain zf-C2H2_aberr PF17017.5 ORF54302 - 0.034 14.3 2.1 0.041 14.0 0.2 1.8 1 1 1 2 2 2 0 Aberrant zinc-finger zf-C2H2_11 PF16622.5 ORF54302 - 0.055 13.2 1.1 0.1 12.4 1.1 1.4 1 0 0 1 1 1 0 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF54302 - 0.2 12.0 3.1 1.1 9.6 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-LYAR PF08790.11 ORF54302 - 0.25 11.3 2.7 5.2 7.1 0.2 2.2 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger Dr_adhesin PF12393.8 ORF5430 - 0.38 11.1 4.5 1.1 9.6 1.9 2.5 2 0 0 2 2 2 0 Dr family adhesin DFP PF04127.15 ORF54286 - 0.00053 19.9 0.0 0.00069 19.5 0.0 1.1 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein IGPD PF00475.18 ORF54282 - 0.051 13.9 0.0 0.051 13.9 0.0 1.0 1 0 0 1 1 1 0 Imidazoleglycerol-phosphate dehydratase LigB PF02900.18 ORF53988 - 0.065 12.3 0.0 0.071 12.2 0.0 1.0 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase Dak1 PF02733.17 ORF53890 - 0.017 14.0 0.1 0.018 13.9 0.1 1.0 1 0 0 1 1 1 0 Dak1 domain DUF3575 PF12099.8 ORF53440 - 0.037 13.3 0.1 0.038 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3575) DUF3199 PF11436.8 ORF53350 - 0.055 13.5 0.1 0.055 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3199) Ilm1 PF10311.9 ORF53331 - 0.035 13.7 0.1 0.039 13.6 0.1 1.0 1 0 0 1 1 1 0 Increased loss of mitochondrial DNA protein 1 MHCassoc_trimer PF08831.10 ORF5331 - 0.13 12.3 0.1 0.15 12.1 0.1 1.2 1 0 0 1 1 1 0 Class II MHC-associated invariant chain trimerisation domain ATP-synt_C PF00137.21 ORF53199 - 5.9e-07 29.7 6.3 6.5e-07 29.6 6.3 1.1 1 0 0 1 1 1 1 ATP synthase subunit C HEPN_Cthe2314 PF18730.1 ORF52901 - 0.0037 17.3 0.3 0.0037 17.3 0.3 1.1 1 0 0 1 1 1 1 Cthe_2314-like HEPN Tagatose_6_P_K PF08013.11 ORF52315 - 0.32 9.6 0.7 0.32 9.6 0.7 1.0 1 0 0 1 1 1 0 Tagatose 6 phosphate kinase 7TM_GPCR_Srx PF10328.9 ORF52196 - 0.038 13.6 0.5 0.042 13.5 0.5 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srx Exop_C PF18559.1 ORF52050 - 0.019 14.8 0.1 0.023 14.6 0.1 1.0 1 0 0 1 1 1 0 Galactose-binding domain-like PaO PF08417.12 ORF51525 - 0.056 13.6 0.1 0.066 13.4 0.1 1.2 1 0 0 1 1 1 0 Pheophorbide a oxygenase Acp26Ab PF05777.12 ORF51112 - 0.061 14.0 1.9 0.064 13.9 1.9 1.2 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) DUF4477 PF14780.6 ORF51070 - 0.045 13.4 0.2 0.052 13.2 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) DUF4648 PF15505.6 ORF5090 - 0.6 11.0 3.3 0.95 10.4 0.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4648) UL42 PF17638.2 ORF50820 - 0.03 14.3 0.1 0.037 14.0 0.1 1.2 1 0 0 1 1 1 0 HCMV UL42 DUF5385 PF17359.2 ORF50632 - 0.021 14.4 0.1 0.022 14.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) ODR4-like PF14778.6 ORF50507 - 0.032 13.2 0.7 0.032 13.2 0.7 1.0 1 0 0 1 1 1 0 Olfactory receptor 4-like DUF760 PF05542.11 ORF50124 - 0.06 13.7 0.4 0.075 13.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF760) DCAF15_WD40 PF14939.6 ORF5012 - 0.078 12.6 0.0 0.085 12.5 0.0 1.0 1 0 0 1 1 1 0 DDB1-and CUL4-substrate receptor 15, WD repeat Ni_hydr_CYTB PF01292.20 ORF50007 - 0.0024 17.5 5.9 0.0024 17.5 5.9 1.3 2 0 0 2 2 2 1 Prokaryotic cytochrome b561 HemY_N PF07219.13 ORF50007 - 0.05 13.8 0.4 0.059 13.6 0.4 1.1 1 0 0 1 1 1 0 HemY protein N-terminus KH_dom-like PF14714.6 ORF50006 - 0.018 15.3 0.1 0.023 15.0 0.1 1.1 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DUF4046 PF13255.6 ORF49838 - 0.11 13.0 0.2 0.13 12.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4046) zf-C5HC2 PF02928.16 ORF49838 - 0.6 10.5 8.5 0.43 11.0 6.7 1.7 2 0 0 2 2 2 0 C5HC2 zinc finger Jiraiya PF15038.6 ORF49815 - 0.048 13.1 0.4 0.047 13.1 0.4 1.0 1 0 0 1 1 1 0 Jiraiya Stomagen PF16851.5 ORF49502 - 0.08 13.0 0.3 0.11 12.5 0.3 1.2 1 0 0 1 1 1 0 Stomagen Receptor_2B4 PF11465.8 ORF4934 - 0.047 13.9 0.3 0.054 13.7 0.3 1.1 1 0 0 1 1 1 0 Natural killer cell receptor 2B4 DUF3094 PF11293.8 ORF49333 - 0.063 13.0 2.1 1.5 8.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3094) FAM70 PF14967.6 ORF49296 - 0.091 12.2 0.1 0.1 12.1 0.1 1.0 1 0 0 1 1 1 0 FAM70 protein Haem_bd PF14376.6 ORF47667 - 0.19 11.7 1.6 0.24 11.4 1.6 1.1 1 0 0 1 1 1 0 Haem-binding domain STAT2_C PF12188.8 ORF46348 - 0.16 11.9 0.8 0.53 10.2 0.3 1.9 1 1 1 2 2 2 0 Signal transducer and activator of transcription 2 C terminal Foamy_virus_ENV PF03408.14 ORF4631 - 0.29 8.9 2.7 0.29 8.9 2.7 1.0 1 0 0 1 1 1 0 Foamy virus envelope protein CTXphi_pIII-N1 PF16710.5 ORF45709 - 0.05 13.7 0.3 0.054 13.6 0.3 1.2 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII ELM2 PF01448.24 ORF45479 - 0.0064 17.2 0.6 0.017 15.8 0.0 1.9 2 0 0 2 2 2 1 ELM2 domain DUF4784 PF16023.5 ORF44719 - 0.091 11.7 1.5 0.087 11.8 1.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4784) DUF2254 PF10011.9 ORF44572 - 0.0042 15.9 0.1 0.0049 15.7 0.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) Asp_protease PF09668.10 ORF44473 - 0.0049 16.7 0.1 0.0054 16.5 0.1 1.0 1 0 0 1 1 1 1 Aspartyl protease Defensin_3 PF08131.11 ORF44422 - 0.12 12.6 0.4 0.22 11.7 0.1 1.6 2 0 0 2 2 2 0 Defensin-like peptide family Kri1_C PF12936.7 ORF44383 - 0.036 14.3 2.0 0.037 14.2 2.0 1.1 1 0 0 1 1 1 0 KRI1-like family C-terminal UPF0225 PF17775.1 ORF44383 - 0.059 14.2 4.5 0.55 11.1 4.5 1.9 1 1 0 1 1 1 0 UPF0225 domain DoxD PF04173.13 ORF44325 - 0.076 12.9 0.4 0.082 12.8 0.4 1.0 1 0 0 1 1 1 0 TQO small subunit DoxD DHR-2 PF06920.13 ORF4376 - 0.0039 15.9 0.0 0.004 15.9 0.0 1.0 1 0 0 1 1 1 1 Dock homology region 2 APO_RNA-bind PF05634.11 ORF4376 - 0.11 11.8 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 APO RNA-binding ENOD40 PF08247.11 ORF43483 - 3.3 7.9 7.2 2 8.6 0.2 2.9 3 0 0 3 3 3 0 ENOD40 protein KH_6 PF15985.5 ORF43167 - 0.012 15.9 0.1 0.024 15.0 0.1 1.5 1 0 0 1 1 1 0 KH domain DUF3671 PF12420.8 ORF43089 - 0.019 15.1 0.4 0.019 15.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function Sigma_reg_N PF13800.6 ORF43089 - 0.027 14.8 0.3 0.039 14.3 0.3 1.2 1 0 0 1 1 1 0 Sigma factor regulator N-terminal T2SSF PF00482.23 ORF43089 - 0.064 13.2 0.1 0.074 13.0 0.1 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F Bee_toxin PF17454.2 ORF43089 - 2 8.5 6.3 3 8.0 6.3 1.3 1 0 0 1 1 1 0 Honey bee toxin ComC PF03047.14 ORF43036 - 0.0068 16.1 0.3 3.3 7.6 0.1 2.2 2 0 0 2 2 2 2 COMC family zf-CpG_bind_C PF12269.8 ORF42926 - 0.69 9.7 7.0 0.7 9.6 7.0 1.0 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain DUF870 PF05912.11 ORF42752 - 0.097 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Caenorhabditis elegans protein of unknown function (DUF870) LANC_like PF05147.13 ORF42279 - 0.058 12.0 0.0 0.058 12.0 0.0 1.0 1 0 0 1 1 1 0 Lanthionine synthetase C-like protein Viral_DNA_bp PF00747.17 ORF42065 - 0.09 9.9 0.1 0.092 9.9 0.1 1.0 1 0 0 1 1 1 0 ssDNA binding protein DUF3902 PF13042.6 ORF4118 - 0.0094 15.5 1.1 0.01 15.4 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3902) DUF3810 PF12725.7 ORF4118 - 1 8.7 6.0 1 8.6 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) CRISPR_Cas9_WED PF18061.1 ORF40502 - 0.011 15.8 0.3 0.012 15.7 0.3 1.1 1 0 0 1 1 1 0 CRISPR-Cas9 WED domain DUF4972 PF16342.5 ORF40502 - 0.046 13.4 0.4 0.047 13.4 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) Terminase_GpA PF05876.12 ORF40213 - 0.21 10.1 3.2 0.22 10.1 3.2 1.0 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) ATPase_2 PF01637.18 ORF40056 - 0.25 11.2 0.1 0.25 11.2 0.1 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Uroplakin_II PF07353.12 ORF39845 - 0.035 13.6 0.3 0.039 13.5 0.3 1.0 1 0 0 1 1 1 0 Uroplakin II NEMP PF10225.9 ORF39746 - 0.0056 16.4 0.9 0.0057 16.3 0.9 1.0 1 0 0 1 1 1 1 NEMP family DUF3316 PF11777.8 ORF39746 - 0.0061 16.6 0.8 0.0064 16.6 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3316) EVC2_like PF12297.8 ORF39008 - 0.08 11.6 0.2 0.085 11.5 0.2 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Myticin-prepro PF10690.9 ORF38398 - 0.033 14.4 2.0 0.034 14.4 2.0 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Carla_C4 PF01623.17 ORF38398 - 0.09 12.7 7.5 0.095 12.7 7.5 1.1 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein DUF4805 PF16063.5 ORF38345 - 0.2 11.0 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4805) DUF3000 PF11452.8 ORF37950 - 0.074 12.6 1.7 0.093 12.2 1.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3000) Ge1_WD40 PF16529.5 ORF37875 - 0.0026 16.8 0.1 0.0026 16.8 0.1 1.0 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40 PF00400.32 ORF37875 - 0.0026 18.5 0.0 0.0065 17.3 0.0 1.6 2 0 0 2 2 2 1 WD domain, G-beta repeat DUF4736 PF15883.5 ORF37829 - 0.54 10.0 2.6 0.6 9.8 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) NB PF04159.13 ORF37614 - 0.061 13.4 0.0 0.073 13.1 0.0 1.1 1 0 0 1 1 1 0 NB glycoprotein EMC3_TMCO1 PF01956.16 ORF37586 - 0.7 9.6 2.4 0.75 9.5 2.4 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like EVC2_like PF12297.8 ORF36534 - 0.08 11.6 0.2 0.085 11.5 0.2 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Mito_morph_reg PF14972.6 ORF35947 - 0.85 9.2 6.4 0.96 9.0 6.4 1.0 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator ETAA1 PF15350.6 ORF35848 - 0.11 10.8 0.9 0.13 10.5 0.9 1.0 1 0 0 1 1 1 0 Ewing's tumour-associated antigen 1 homologue Isochorismatase PF00857.20 ORF34589 - 1.4e-12 48.1 0.3 1.6e-12 48.0 0.3 1.0 1 0 0 1 1 1 1 Isochorismatase family Tachystatin_A PF11406.8 ORF34497 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A DUF4801 PF16059.5 ORF34313 - 0.0012 18.8 1.6 0.0018 18.2 1.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4801) UPF0731 PF14982.6 ORF34313 - 0.18 12.0 4.4 0.13 12.4 3.2 1.4 1 1 0 1 1 1 0 UPF0731 family Codanin-1_C PF15296.6 ORF34028 - 0.0024 17.9 0.6 0.0027 17.8 0.6 1.1 1 0 0 1 1 1 1 Codanin-1 C-terminus DUF5313 PF17240.2 ORF3399 - 7 7.1 7.9 7.8 7.0 7.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Defensin_beta_2 PF13841.6 ORF33660 - 0.77 10.3 6.9 13 6.4 0.5 3.0 2 1 1 3 3 3 0 Beta defensin DUF3810 PF12725.7 ORF33551 - 0.89 8.8 3.0 0.88 8.9 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Baculo_11_kDa PF06143.11 ORF33551 - 2.3 7.8 8.7 1.2 8.7 6.3 1.7 1 1 1 2 2 2 0 Baculovirus 11 kDa family CaM_bdg_C0 PF10562.9 ORF33270 - 0.032 14.3 0.0 0.048 13.7 0.0 1.2 1 0 0 1 1 1 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit PsbT PF01405.17 ORF33115 - 0.88 9.4 4.0 2 8.3 4.0 1.5 1 0 0 1 1 1 0 Photosystem II reaction centre T protein Duffy_binding PF05424.11 ORF32059 - 0.026 14.6 0.8 0.029 14.4 0.8 1.1 1 0 0 1 1 1 0 Duffy binding domain Arena_ncap_C PF17290.2 ORF31748 - 0.055 12.8 0.4 0.06 12.7 0.4 1.0 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain HlyD_D23 PF16576.5 ORF31748 - 0.072 12.3 0.2 0.072 12.3 0.2 1.0 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Trypan_PARP PF05887.11 ORF3151 - 0.39 10.7 4.7 0.45 10.5 4.7 1.0 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) vATP-synt_AC39 PF01992.16 ORF31286 - 0.087 12.3 0.0 0.087 12.3 0.0 1.0 1 0 0 1 1 1 0 ATP synthase (C/AC39) subunit Lambda_CIII PF02061.16 ORF30628 - 0.4 10.8 2.4 0.42 10.7 0.5 1.9 2 0 0 2 2 2 0 Lambda Phage CIII HMG_box PF00505.19 ORF30524 - 0.0032 17.8 0.2 0.0054 17.1 0.2 1.4 1 0 0 1 1 1 1 HMG (high mobility group) box DUF4229 PF14012.6 ORF3024 - 1 9.5 7.3 1.2 9.2 7.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) FSAP_sig_propep PF03032.15 ORF3024 - 6.8 6.8 7.7 5.5 7.1 2.3 2.3 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide MotB_plug PF13677.6 ORF30094 - 0.043 13.4 0.0 0.043 13.4 0.0 1.5 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB AA_permease PF00324.21 ORF3009 - 0.06 11.9 0.5 0.063 11.9 0.5 1.0 1 0 0 1 1 1 0 Amino acid permease DUF3290 PF11694.8 ORF29646 - 0.00035 20.6 4.0 0.00035 20.6 4.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3290) FAM209 PF15206.6 ORF29646 - 0.01 15.6 0.6 0.012 15.4 0.6 1.1 1 0 0 1 1 1 0 FAM209 family MFS_1_like PF12832.7 ORF29646 - 0.034 13.0 2.9 0.037 12.9 2.9 1.0 1 0 0 1 1 1 0 MFS_1 like family RDD PF06271.12 ORF29646 - 0.048 13.9 3.9 0.056 13.6 3.9 1.0 1 0 0 1 1 1 0 RDD family DUF4131 PF13567.6 ORF29646 - 0.076 12.7 0.5 0.085 12.5 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2976 PF11190.8 ORF29646 - 0.36 10.7 3.9 1.6 8.5 3.9 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2976) DUF3810 PF12725.7 ORF29646 - 1.1 8.6 4.6 1.2 8.5 4.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Use1 PF09753.9 ORF29646 - 1.1 8.9 2.2 1.2 8.8 2.2 1.1 1 0 0 1 1 1 0 Membrane fusion protein Use1 MPS-4 PF17523.2 ORF29646 - 3.5 7.8 7.6 2.7 8.2 6.4 1.4 1 1 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF3955 PF13127.6 ORF29543 - 0.083 12.7 4.0 0.11 12.4 4.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3955) Sel_put PF04328.13 ORF29242 - 1.6e-30 104.9 0.5 1.7e-30 104.8 0.5 1.0 1 0 0 1 1 1 1 Selenoprotein, putative Tantalus PF15386.6 ORF29205 - 0.042 13.9 0.0 0.059 13.5 0.0 1.4 1 1 0 1 1 1 0 Drosophila Tantalus-like Oxidored_molyb PF00174.19 ORF28917 - 0.071 12.7 0.0 0.076 12.6 0.0 1.0 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain NR_Repeat PF14046.6 ORF28159 - 0.3 11.3 3.5 7 6.9 1.4 2.3 1 1 1 2 2 2 0 Nuclear receptor repeat PSI PF01437.25 ORF28063 - 0.14 12.7 2.9 0.2 12.2 2.9 1.4 1 1 0 1 1 1 0 Plexin repeat DUF5053 PF16476.5 ORF28034 - 0.0079 15.8 0.0 0.01 15.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5053) ERGIC_N PF13850.6 ORF28034 - 0.0091 16.3 0.4 0.011 16.1 0.4 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF3789 PF12664.7 ORF28034 - 0.019 14.7 4.2 0.029 14.1 4.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3789) Trypan_PARP PF05887.11 ORF27973 - 0.39 10.7 4.7 0.45 10.5 4.7 1.0 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) LRR_3 PF07725.12 ORF27822 - 0.11 12.4 0.1 0.66 9.9 0.0 2.1 2 0 0 2 2 2 0 Leucine Rich Repeat Ribosomal_S30 PF04758.14 ORF27583 - 3.6e-26 91.1 7.7 4.1e-26 91.0 7.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S30 Snurportin1 PF11538.8 ORF27583 - 1.8 8.8 10.3 0.51 10.6 5.6 2.0 1 1 1 2 2 2 0 Snurportin1 Tachystatin_A PF11406.8 ORF27363 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A Pkinase PF00069.25 ORF27133 - 8.9e-17 61.3 0.0 9.7e-17 61.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF27133 - 3.6e-06 26.5 0.0 3.9e-06 26.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF1351 PF07083.11 ORF26910 - 0.0066 16.2 1.3 0.0072 16.1 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1351) STAT_int PF02865.17 ORF26910 - 0.018 15.5 0.4 0.022 15.2 0.4 1.1 1 0 0 1 1 1 0 STAT protein, protein interaction domain HRDC PF00570.23 ORF26910 - 0.11 12.5 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 HRDC domain SseC PF04888.12 ORF26910 - 0.7 9.4 1.6 0.72 9.4 1.6 1.0 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family HGAL PF15666.5 ORF26890 - 0.052 13.6 0.0 0.058 13.5 0.0 1.1 1 0 0 1 1 1 0 Germinal center-associated lymphoma GIT1_C PF12205.8 ORF26574 - 0.054 13.6 0.0 0.068 13.3 0.0 1.0 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term MSP1a PF11670.8 ORF2643 - 0.022 14.1 1.5 0.023 14.0 1.5 1.1 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) Transposase_1 PF01359.18 ORF26256 - 0.1 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Transposase (partial DDE domain) DOCK_N PF16172.5 ORF26087 - 0.26 10.2 4.0 0.28 10.0 4.0 1.0 1 0 0 1 1 1 0 DOCK N-terminus DUF5472 PF17566.2 ORF25793 - 1.1 9.3 3.8 0.81 9.7 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5472) Dr_adhesin PF12393.8 ORF25190 - 0.38 11.1 4.5 1.1 9.6 1.9 2.5 2 0 0 2 2 2 0 Dr family adhesin gp32 PF08804.10 ORF24563 - 0.13 12.3 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 gp32 DNA binding protein like Glucan_synthase PF02364.15 ORF24420 - 1.2 7.2 4.8 1.2 7.2 4.8 1.0 1 0 0 1 1 1 0 1,3-beta-glucan synthase component CHCH PF06747.13 ORF24188 - 0.042 14.0 1.5 0.056 13.6 0.6 1.7 1 1 1 2 2 2 0 CHCH domain Cmc1 PF08583.10 ORF24188 - 0.054 13.5 2.2 0.14 12.2 0.8 1.9 1 1 2 3 3 3 0 Cytochrome c oxidase biogenesis protein Cmc1 like CX9C PF16860.5 ORF24188 - 0.17 11.9 1.7 0.31 11.1 0.5 1.9 1 1 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, MerE PF05052.12 ORF23213 - 0.032 14.1 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 MerE protein DUF2630 PF10944.8 ORF23213 - 0.2 12.1 0.4 0.25 11.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) DUF420 PF04238.12 ORF22869 - 0.042 14.1 0.0 0.045 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF420) cEGF PF12662.7 ORF22447 - 0.062 13.3 1.1 0.094 12.7 1.1 1.3 1 0 0 1 1 1 0 Complement Clr-like EGF-like DUF4481 PF14800.6 ORF22239 - 0.37 10.2 5.1 0.4 10.1 5.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) Antibiotic_NAT PF02522.14 ORF21788 - 0.0017 18.2 0.2 0.0018 18.1 0.2 1.0 1 0 0 1 1 1 1 Aminoglycoside 3-N-acetyltransferase NS3_envE PF02723.14 ORF21197 - 0.033 14.3 4.5 0.036 14.1 4.5 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Pex24p PF06398.11 ORF21197 - 0.44 9.5 2.9 0.41 9.6 2.9 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF3795 PF12675.7 ORF20695 - 0.0039 17.6 1.6 0.0041 17.5 1.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3795) COX17 PF05051.13 ORF20326 - 0.013 15.9 0.8 0.013 15.9 0.8 1.7 2 0 0 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) DUF4863 PF16155.5 ORF19668 - 0.058 13.3 0.2 0.059 13.2 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4863) KH_dom-like PF14714.6 ORF19519 - 0.018 15.3 0.1 0.023 15.0 0.1 1.1 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DUF5472 PF17566.2 ORF19097 - 1.1 9.3 3.8 0.81 9.7 0.3 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5472) YWFCY PF14293.6 ORF18451 - 6.8 7.1 7.8 9 6.7 0.6 2.4 1 1 1 2 2 2 0 YWFCY protein TILa PF12714.7 ORF17612 - 0.05 13.6 2.1 4.3 7.4 0.2 2.1 1 1 1 2 2 2 0 TILa domain Tachystatin_A PF11406.8 ORF17329 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A Pkinase PF00069.25 ORF17131 - 2.6e-10 40.1 0.2 2.7e-10 40.1 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 ORF17131 - 0.00048 19.8 0.0 0.00048 19.8 0.0 1.0 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_Tyr PF07714.17 ORF17131 - 0.0022 17.3 0.2 0.0023 17.3 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Mak16 PF04874.14 ORF17131 - 0.0084 16.7 0.1 0.01 16.4 0.1 1.1 1 0 0 1 1 1 1 Mak16 protein C-terminal region DUF1966 PF09260.11 ORF16995 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1966) zf-C2H2 PF00096.26 ORF16654 - 3.7e-11 42.8 9.0 1.8e-06 28.0 2.8 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF16654 - 6.6e-07 29.6 7.9 0.0011 19.6 2.3 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF16654 - 0.00017 21.8 0.7 0.00017 21.8 0.7 3.1 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2_aberr PF17017.5 ORF16654 - 0.0063 16.7 0.3 0.0063 16.7 0.3 1.8 1 1 1 2 2 2 1 Aberrant zinc-finger FOXP-CC PF16159.5 ORF16654 - 0.038 14.6 3.0 0.083 13.5 3.0 1.7 1 1 0 1 1 1 0 FOXP coiled-coil domain zf-C2HC_2 PF13913.6 ORF16654 - 0.12 12.3 0.4 0.12 12.3 0.4 3.0 3 1 0 3 3 3 0 zinc-finger of a C2HC-type zf-met PF12874.7 ORF16654 - 1.2 9.6 11.7 20 5.8 5.5 3.2 2 1 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 ORF16654 - 2.1 8.4 12.0 0.94 9.6 0.5 3.2 3 0 0 3 3 3 0 C2H2-type zinc finger DUF5540 PF17694.1 ORF16632 - 0.046 14.2 2.8 0.06 13.9 2.8 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5540) Acyl-CoA_dh_M PF02770.19 ORF16440 - 0.061 13.5 0.0 0.087 13.0 0.0 1.3 1 1 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain DUF61 PF01886.16 ORF16418 - 0.047 13.7 0.0 0.054 13.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function DUF61 FrhB_FdhB_C PF04432.13 ORF16418 - 0.12 12.2 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FBA PF04300.13 ORF15560 - 0.11 12.1 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 F-box associated region CX9C PF16860.5 ORF152655 - 0.068 13.2 0.7 7.2 6.7 0.0 2.3 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, zf-B_box PF00643.24 ORF152450 - 1.5e-05 25.0 6.9 2e-05 24.7 6.9 1.2 1 0 0 1 1 1 1 B-box zinc finger IBR PF01485.21 ORF152450 - 0.85 9.9 9.4 0.24 11.7 6.4 1.6 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain ANTAR PF03861.14 ORF152261 - 0.14 12.0 0.4 5.6 6.9 0.3 2.1 1 1 1 2 2 2 0 ANTAR domain ORMDL PF04061.14 ORF152213 - 0.0054 16.5 0.0 0.0058 16.4 0.0 1.1 1 0 0 1 1 1 1 ORMDL family MerE PF05052.12 ORF151972 - 0.032 14.1 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 MerE protein DUF2630 PF10944.8 ORF151972 - 0.2 12.1 0.4 0.25 11.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) ELK PF03789.13 ORF151872 - 0.0083 16.2 1.1 3.6 7.8 0.2 2.4 2 0 0 2 2 2 2 ELK domain DUF4736 PF15883.5 ORF151758 - 0.54 10.0 2.6 0.6 9.8 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) UQ_con PF00179.26 ORF151554 - 0.1 12.2 0.2 0.12 12.1 0.2 1.1 1 0 0 1 1 1 0 Ubiquitin-conjugating enzyme AAA_12 PF13087.6 ORF151390 - 0.045 13.4 0.2 0.051 13.2 0.2 1.1 1 0 0 1 1 1 0 AAA domain PPP1R35_C PF15503.6 ORF15129 - 0.078 12.8 0.1 0.089 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 35 C-terminus RPT PF13446.6 ORF150929 - 0.045 13.7 0.2 0.055 13.4 0.2 1.2 1 0 0 1 1 1 0 A repeated domain in UCH-protein Dyp_perox PF04261.12 ORF150917 - 0.13 11.2 0.1 0.14 11.1 0.1 1.0 1 0 0 1 1 1 0 Dyp-type peroxidase family PAN_4 PF14295.6 ORF150672 - 0.073 13.0 0.1 0.099 12.6 0.1 1.1 1 0 0 1 1 1 0 PAN domain zf-C3HC4_2 PF13923.6 ORF150495 - 0.32 10.9 5.9 0.28 11.1 2.8 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) MyTH4 PF00784.17 ORF150241 - 0.17 12.4 0.2 0.24 11.9 0.2 1.3 1 0 0 1 1 1 0 MyTH4 domain RNA_pol_A_CTD PF03118.15 ORF149267 - 0.053 13.3 0.1 0.081 12.7 0.1 1.3 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain Imm_superinfect PF14373.6 ORF149267 - 0.065 13.2 0.7 2.9 7.9 0.0 2.2 2 0 0 2 2 2 0 Superinfection immunity protein Tachystatin_A PF11406.8 ORF148987 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A TMEM144 PF07857.12 ORF14863 - 1.7e-08 33.8 0.6 1.9e-08 33.7 0.6 1.0 1 0 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Sugar_transport PF06800.12 ORF14863 - 0.00064 19.1 0.4 0.0007 19.0 0.4 1.0 1 0 0 1 1 1 1 Sugar transport protein DUF4501 PF14946.6 ORF148504 - 0.045 13.8 2.1 0.05 13.7 2.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4501) Tryp_alpha_amyl PF00234.22 ORF148504 - 0.05 14.0 3.6 0.053 13.9 3.6 1.1 1 0 0 1 1 1 0 Protease inhibitor/seed storage/LTP family SBF PF01758.16 ORF148250 - 0.028 14.1 0.3 0.034 13.8 0.3 1.0 1 0 0 1 1 1 0 Sodium Bile acid symporter family Clc-like PF07062.12 ORF148077 - 0.35 10.3 4.6 0.41 10.1 4.6 1.1 1 0 0 1 1 1 0 Clc-like Peptidase_U4 PF03419.13 ORF148077 - 0.38 10.0 8.7 0.41 9.9 8.7 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Oxidored_molyb PF00174.19 ORF147654 - 0.071 12.7 0.0 0.076 12.6 0.0 1.0 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain Microvir_lysis PF04517.12 ORF147303 - 0.054 13.4 0.1 0.086 12.8 0.1 1.4 1 0 0 1 1 1 0 Microvirus lysis protein (E), C terminus Gp45_2 PF17470.2 ORF146918 - 0.016 15.2 0.1 0.024 14.6 0.1 1.3 1 0 0 1 1 1 0 Phage gene product 45.2 Inhibitor_I66 PF16850.5 ORF146631 - 0.1 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Peptidase inhibitor I66 DUF3896 PF13035.6 ORF146631 - 0.91 9.7 4.7 7.8 6.7 0.3 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF3896) Vps4_C PF09336.10 ORF146331 - 0.00011 22.1 1.6 0.00036 20.5 0.3 2.3 1 1 2 3 3 3 1 Vps4 C terminal oligomerisation domain AAA_lid_3 PF17862.1 ORF146331 - 0.0039 17.0 0.1 0.019 14.8 0.1 1.9 1 1 0 1 1 1 1 AAA+ lid domain DIRP PF06584.13 ORF146331 - 0.015 15.4 0.1 0.02 15.1 0.1 1.1 1 0 0 1 1 1 0 DIRP EMC3_TMCO1 PF01956.16 ORF145845 - 0.7 9.6 2.4 0.75 9.5 2.4 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DUF1966 PF09260.11 ORF145331 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1966) TMEM213 PF15192.6 ORF145309 - 0.049 13.6 2.1 0.058 13.4 2.1 1.1 1 0 0 1 1 1 0 TMEM213 family Sarcolipin PF05366.11 ORF144628 - 0.099 12.4 0.1 0.19 11.4 0.1 1.6 1 0 0 1 1 1 0 Sarcolipin zf-tcix PF14952.6 ORF144587 - 0.15 11.7 9.0 1 9.0 2.9 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding GPR_Gpa2_C PF11970.8 ORF144290 - 0.07 13.2 0.3 0.085 12.9 0.3 1.2 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term Viral_DNA_bp PF00747.17 ORF143987 - 0.09 9.9 0.1 0.092 9.9 0.1 1.0 1 0 0 1 1 1 0 ssDNA binding protein DUF1816 PF08846.10 ORF143406 - 0.052 13.6 0.0 0.064 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1816) DUF2420 PF10336.9 ORF142661 - 0.011 15.7 0.6 0.012 15.6 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) Tachystatin_A PF11406.8 ORF142502 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A DUF2729 PF10870.8 ORF142343 - 0.019 14.8 0.1 0.023 14.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2729) DUF3844 PF12955.7 ORF142343 - 0.035 14.2 2.1 0.038 14.1 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) DALR_2 PF09190.11 ORF142343 - 0.098 13.2 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 DALR domain DUF5583 PF17821.1 ORF142333 - 0.056 13.4 0.2 0.071 13.1 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5583) DUF2678 PF10856.8 ORF142219 - 0.012 15.6 0.6 0.013 15.4 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2678) Pex24p PF06398.11 ORF142185 - 7.3 5.5 7.6 7.1 5.5 7.6 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin RE_BstXI PF09552.10 ORF141900 - 0.12 11.5 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 BstXI restriction endonuclease RSS_P20 PF11757.8 ORF141697 - 0.03 14.8 6.4 0.034 14.6 6.4 1.1 1 0 0 1 1 1 0 Suppressor of RNA silencing P21-like N-terminal domain DUF4901 PF16244.5 ORF141697 - 0.058 12.7 0.1 0.063 12.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4901) DUF688 PF05097.12 ORF141482 - 2.9 7.0 6.6 0.84 8.7 1.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF688) HALZ PF02183.18 ORF141199 - 0.05 13.8 0.4 0.096 12.9 0.3 1.5 2 0 0 2 2 2 0 Homeobox associated leucine zipper CxC4 PF18717.1 ORF140977 - 0.062 13.1 2.2 0.07 13.0 2.2 1.0 1 0 0 1 1 1 0 CxC4 like cysteine cluster associated with KDZ transposases HIGH_NTase1 PF05636.11 ORF139767 - 0.12 11.6 3.6 0.12 11.5 3.6 1.0 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase V_ATPase_I PF01496.19 ORF139767 - 0.43 8.4 3.7 0.46 8.3 3.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HDV_ag PF01517.18 ORF139767 - 0.92 9.3 6.6 1 9.1 6.6 1.1 1 0 0 1 1 1 0 Hepatitis delta virus delta antigen Ax_dynein_light PF10211.9 ORF139767 - 2.6 7.9 12.1 2.8 7.8 12.1 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain DnaG_DnaB_bind PF08278.11 ORF139413 - 0.0014 19.2 1.2 0.0026 18.3 0.6 1.6 2 0 0 2 2 2 1 DNA primase DnaG DnaB-binding CagY_M PF07337.11 ORF139413 - 0.067 12.8 0.3 5.4 6.7 0.1 2.3 2 0 0 2 2 2 0 DC-EC Repeat DUF3805 PF12712.7 ORF139224 - 0.07 13.3 0.0 0.07 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3805) IL5 PF02025.15 ORF138712 - 0.015 15.5 0.1 0.018 15.3 0.1 1.1 1 0 0 1 1 1 0 Interleukin 5 Carot_N PF09150.10 ORF137997 - 0.13 12.2 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Orange carotenoid protein, N-terminal TRP_2 PF08344.11 ORF137765 - 0.04 14.1 0.2 0.067 13.4 0.2 1.5 1 1 0 1 1 1 0 Transient receptor ion channel II DUF5423 PF17461.2 ORF137731 - 0.18 10.6 1.6 0.19 10.5 1.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Rpr2 PF04032.16 ORF137538 - 0.021 15.1 0.2 0.022 15.0 0.2 1.2 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Transketolase_N PF00456.21 ORF137538 - 0.1 11.5 0.0 0.11 11.4 0.0 1.0 1 0 0 1 1 1 0 Transketolase, thiamine diphosphate binding domain UL11 PF11094.8 ORF137295 - 0.074 12.9 3.1 0.11 12.4 3.1 1.2 1 0 0 1 1 1 0 Membrane-associated tegument protein US6 PF17616.2 ORF137200 - 0.03 14.3 2.1 0.03 14.3 2.1 1.0 1 0 0 1 1 1 0 Viral unique short region 6 Ank_4 PF13637.6 ORF137123 - 0.045 14.3 0.1 0.073 13.7 0.1 1.5 1 1 0 1 1 1 0 Ankyrin repeats (many copies) Planc_extracel PF07595.12 ORF137069 - 0.1 12.4 3.0 1.3 9.0 2.3 2.2 2 0 0 2 2 2 0 Planctomycete extracellular DOPA_dioxygen PF08883.11 ORF136218 - 0.074 13.2 0.3 0.082 13.1 0.3 1.1 1 0 0 1 1 1 0 Dopa 4,5-dioxygenase family Alpha_E3_glycop PF01563.16 ORF135922 - 0.024 14.7 1.0 0.024 14.7 1.0 1.8 2 0 0 2 2 2 0 Alphavirus E3 glycoprotein Cortexin PF11057.8 ORF13590 - 0.051 13.4 0.5 0.058 13.2 0.5 1.1 1 0 0 1 1 1 0 Cortexin of kidney Rabaptin PF03528.15 ORF135734 - 0.04 12.6 0.0 0.046 12.4 0.0 1.0 1 0 0 1 1 1 0 Rabaptin RecO_N_2 PF13114.6 ORF135489 - 0.02 14.6 0.3 0.45 10.3 0.2 2.0 2 0 0 2 2 2 0 RecO N terminal Cnd3 PF12719.7 ORF135426 - 0.094 11.9 0.0 0.2 10.8 0.0 1.5 1 1 1 2 2 2 0 Nuclear condensing complex subunits, C-term domain DUF4653 PF15546.6 ORF135368 - 0.065 12.8 0.2 0.077 12.6 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4653) CEBP_ZZ PF16366.5 ORF135243 - 1.7 9.0 6.8 0.65 10.3 1.6 2.0 2 0 0 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain DUF4229 PF14012.6 ORF13518 - 0.12 12.5 2.3 0.15 12.2 2.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4229) TRIQK PF15168.6 ORF13518 - 0.35 10.8 1.1 0.36 10.8 0.4 1.3 1 1 0 1 1 1 0 Triple QxxK/R motif-containing protein family DUF5564 PF17719.1 ORF135034 - 0.017 15.3 0.5 0.019 15.1 0.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5564) IGF2_C PF08365.11 ORF134933 - 0.015 15.3 0.0 0.024 14.6 0.0 1.3 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide Yopt PF09467.10 ORF134649 - 0.038 14.0 0.3 0.048 13.7 0.3 1.2 1 0 0 1 1 1 0 Hypothetical protein Yopt TMCO5 PF14992.6 ORF134417 - 0.1 12.2 0.1 0.11 12.0 0.1 1.0 1 0 0 1 1 1 0 TMCO5 family IL1 PF00340.19 ORF134414 - 0.099 12.3 0.1 0.1 12.3 0.1 1.0 1 0 0 1 1 1 0 Interleukin-1 / 18 Nucleocap_ssRNA PF11128.8 ORF134414 - 0.12 12.1 0.0 0.13 12.0 0.0 1.0 1 0 0 1 1 1 0 Plant viral coat protein nucleocapsid DUF4083 PF13314.6 ORF134170 - 0.4 10.7 2.2 0.6 10.1 2.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) zf-CpG_bind_C PF12269.8 ORF134170 - 2.6 7.8 8.4 2.6 7.8 8.4 1.0 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain Pterin_bind PF00809.22 ORF134108 - 9e-08 32.1 0.1 1.2e-07 31.6 0.1 1.2 1 0 0 1 1 1 1 Pterin binding enzyme TSC22 PF01166.18 ORF133644 - 0.00023 21.4 3.9 0.034 14.5 0.3 2.1 1 1 1 2 2 2 2 TSC-22/dip/bun family UPF0242 PF06785.11 ORF133644 - 0.00093 19.4 4.1 0.00093 19.4 4.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Transcrip_act PF04949.13 ORF133644 - 0.001 19.0 0.7 0.0011 18.9 0.7 1.0 1 0 0 1 1 1 1 Transcriptional activator FPP PF05911.11 ORF133644 - 0.0013 17.0 1.1 0.0013 17.0 1.1 1.0 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil ADIP PF11559.8 ORF133644 - 0.0015 18.6 3.9 0.0017 18.5 3.9 1.0 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding Herpes_BLRF2 PF05812.12 ORF133644 - 0.0031 17.6 2.5 0.026 14.7 2.5 2.0 1 1 0 1 1 1 1 Herpesvirus BLRF2 protein Cep57_CLD_2 PF14197.6 ORF133644 - 0.0037 17.3 5.1 0.083 13.0 0.7 2.1 2 0 0 2 2 2 2 Centrosome localisation domain of PPC89 DivIC PF04977.15 ORF133644 - 0.0074 16.0 7.2 0.29 10.9 0.2 2.1 1 1 0 2 2 2 2 Septum formation initiator Leu_zip PF15294.6 ORF133644 - 0.017 14.6 4.1 0.069 12.7 0.4 2.0 1 1 1 2 2 2 0 Leucine zipper TolA_bind_tri PF16331.5 ORF133644 - 0.03 14.4 3.2 0.21 11.7 1.3 2.0 1 1 1 2 2 2 0 TolA binding protein trimerisation bZIP_2 PF07716.15 ORF133644 - 0.033 14.3 3.1 3 8.0 0.1 2.1 2 0 0 2 2 2 0 Basic region leucine zipper PRKG1_interact PF15898.5 ORF133644 - 0.033 15.1 3.1 0.66 10.9 0.2 2.2 1 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain ZapB PF06005.12 ORF133644 - 0.046 14.2 6.4 1.3 9.5 6.4 2.0 1 1 0 1 1 1 0 Cell division protein ZapB Lebercilin PF15619.6 ORF133644 - 0.049 13.3 6.6 0.32 10.6 6.6 1.9 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease TcdA_TcdB_pore PF12920.7 ORF133644 - 0.084 11.1 1.9 0.098 10.9 1.9 1.0 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain DUF2205 PF10224.9 ORF133644 - 0.15 12.1 0.6 0.15 12.1 0.6 2.0 1 1 1 2 2 2 0 Short coiled-coil protein bZIP_1 PF00170.21 ORF133644 - 0.25 11.5 5.0 15 5.8 5.0 2.1 1 1 0 1 1 1 0 bZIP transcription factor betaPIX_CC PF16523.5 ORF133644 - 0.25 11.2 4.0 0.78 9.6 3.9 1.8 1 1 0 1 1 1 0 betaPIX coiled coil Mto2_bdg PF12808.7 ORF133644 - 0.27 11.6 3.6 13 6.1 0.5 2.4 2 1 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region DASH_Dam1 PF08653.10 ORF133644 - 0.67 9.8 2.6 5.4 6.9 0.4 2.1 2 0 0 2 2 2 0 DASH complex subunit Dam1 CAAP1 PF15335.6 ORF133497 - 0.15 12.7 0.0 0.24 12.0 0.0 1.3 1 0 0 1 1 1 0 Caspase activity and apoptosis inhibitor 1 Laterosporulin PF17861.1 ORF13311 - 0.78 10.2 7.9 1.1 9.7 0.6 2.4 1 1 1 2 2 2 0 Laterosporulin defensin-like peptide DUF3805 PF12712.7 ORF132785 - 0.07 13.3 0.0 0.07 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3805) MORN PF02493.20 ORF132499 - 0.1 12.6 1.2 0.16 11.9 1.2 1.4 1 0 0 1 1 1 0 MORN repeat Phage_XkdX PF09693.10 ORF132499 - 0.72 9.9 7.9 0.12 12.4 3.1 1.9 2 0 0 2 2 2 0 Phage uncharacterised protein (Phage_XkdX) DUF4528 PF15031.6 ORF132484 - 0.035 14.2 0.6 0.036 14.1 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) zf-C4 PF00105.18 ORF132484 - 0.12 12.9 4.5 0.25 11.8 0.4 2.1 2 0 0 2 2 2 0 Zinc finger, C4 type (two domains) NUDIX_4 PF14815.6 ORF132172 - 0.1 12.6 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 NUDIX domain Spatacsin_C PF14649.6 ORF132066 - 0.019 14.1 0.1 0.019 14.1 0.1 1.1 1 0 0 1 1 1 0 Spatacsin C-terminus Peptidase_C78 PF07910.13 ORF131628 - 0.18 11.3 0.1 0.2 11.1 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C78 Sex_peptide PF08138.11 ORF131628 - 0.41 10.8 8.5 0.5 10.5 6.6 1.8 1 1 1 2 2 2 0 Sex peptide (SP) family Phage_Integr_2 PF13009.6 ORF131537 - 0.14 11.2 0.2 0.29 10.2 0.0 1.5 1 1 1 2 2 2 0 Putative phage integrase E6 PF00518.17 ORF131071 - 0.035 14.6 0.2 0.04 14.4 0.2 1.1 1 0 0 1 1 1 0 Early Protein (E6) IncF PF17626.2 ORF131071 - 0.17 12.3 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 Inclusion membrane protein F OGFr_N PF04664.13 ORF131062 - 0.12 11.9 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 Opioid growth factor receptor (OGFr) conserved region DUF3437 PF11919.8 ORF131062 - 0.13 12.2 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) Olduvai PF06758.13 ORF13091 - 0.0052 17.0 1.1 2.9 8.2 0.0 2.0 2 0 0 2 2 2 2 Olduvai domain DUF4734 PF15881.5 ORF130416 - 0.14 12.4 1.3 0.14 12.3 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4734) PND PF17949.1 ORF1303 - 0.015 15.5 0.7 0.017 15.3 0.7 1.2 1 0 0 1 1 1 0 FANCM pseudonuclease domain DoxD PF04173.13 ORF130214 - 0.076 12.9 0.4 0.082 12.8 0.4 1.0 1 0 0 1 1 1 0 TQO small subunit DoxD DNase_NucA_NucB PF14040.6 ORF130104 - 0.047 14.1 0.5 0.053 13.9 0.5 1.1 1 0 0 1 1 1 0 Deoxyribonuclease NucA/NucB GPI PF06560.11 ORF12997 - 0.064 12.5 0.0 0.064 12.5 0.0 1.1 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) DZR PF12773.7 ORF129581 - 0.043 13.9 5.9 0.06 13.4 5.9 1.3 1 0 0 1 1 1 0 Double zinc ribbon DUF35_N PF12172.8 ORF129581 - 0.29 11.0 2.9 0.53 10.2 2.9 1.5 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) SBP PF03110.14 ORF129581 - 2.3 8.6 13.4 6.1 7.2 5.4 2.0 1 1 1 2 2 2 0 SBP domain Thioredoxin_3 PF13192.6 ORF129581 - 2.4 8.3 6.7 1.5 8.9 0.4 2.4 1 1 2 3 3 3 0 Thioredoxin domain DUF4710 PF15828.5 ORF128686 - 0.038 14.1 1.0 0.044 13.9 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DUF2225 PF09986.9 ORF128686 - 0.059 13.1 0.2 0.066 12.9 0.2 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) RPT PF13446.6 ORF128317 - 0.045 13.7 0.2 0.055 13.4 0.2 1.2 1 0 0 1 1 1 0 A repeated domain in UCH-protein Hema_HEFG PF02710.14 ORF128250 - 0.032 14.4 0.2 0.033 14.4 0.2 1.1 1 0 0 1 1 1 0 Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein Adipogenin PF15202.6 ORF128212 - 5.2 7.2 7.5 2.3 8.3 4.8 1.7 1 1 1 2 2 2 0 Adipogenin Nucleocapsid-N PF11030.8 ORF128205 - 0.84 9.6 8.6 0.77 9.7 8.6 1.0 1 0 0 1 1 1 0 Nucleocapsid protein N Peptidase_C1 PF00112.23 ORF127972 - 2.3e-09 37.7 2.8 2.5e-09 37.6 2.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease SRCR_2 PF15494.6 ORF127972 - 0.051 14.1 0.0 0.053 14.1 0.0 1.0 1 0 0 1 1 1 0 Scavenger receptor cysteine-rich domain MerE PF05052.12 ORF12761 - 0.032 14.1 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 MerE protein DUF2630 PF10944.8 ORF12761 - 0.2 12.1 0.4 0.25 11.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) Sid-5 PF17204.3 ORF12742 - 0.041 14.1 0.2 0.062 13.5 0.2 1.5 1 1 0 1 1 1 0 Sid-5 family Fer4_2 PF12797.7 ORF127397 - 0.021 14.9 1.8 2.2 8.5 0.4 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Arena_ncap_C PF17290.2 ORF125694 - 0.042 13.2 1.0 0.041 13.2 1.0 1.1 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain SSTK-IP PF15836.5 ORF125584 - 0.046 13.9 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 SSTK-interacting protein, TSSK6-activating co-chaperone protein DUF3390 PF11870.8 ORF125132 - 0.034 14.5 1.5 0.038 14.4 1.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3390) EB_dh PF09459.10 ORF124791 - 0.15 12.0 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Ethylbenzene dehydrogenase Tachystatin_A PF11406.8 ORF124199 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A PMR5N PF14416.6 ORF12389 - 0.14 12.5 2.4 0.18 12.1 2.4 1.3 1 0 0 1 1 1 0 PMR5 N terminal Domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks422.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks422.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks422.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks422.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Orthopox_A36R PF05950.11 ORF123749 - 0.099 12.8 5.0 0.099 12.8 5.0 1.0 1 0 0 1 1 1 0 Orthopoxvirus A36R protein Pkinase PF00069.25 ORF12357 - 7.8e-06 25.4 0.0 8e-06 25.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Tachystatin_A PF11406.8 ORF123374 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A Nod1 PF17114.5 ORF123291 - 0.082 13.1 0.3 0.088 13.0 0.3 1.0 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 CutA1 PF03091.15 ORF123082 - 0.12 12.3 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 CutA1 divalent ion tolerance protein Tachystatin_A PF11406.8 ORF122410 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A DUF1133 PF06576.11 ORF122366 - 0.19 11.1 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1133) DUF1533 PF07550.11 ORF121866 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1533) Tachystatin_A PF11406.8 ORF121837 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A TMEM190 PF15431.6 ORF12136 - 0.091 12.9 2.0 0.11 12.7 2.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 190 PsbT PF01405.17 ORF121165 - 0.03 14.1 0.9 0.03 14.1 0.9 1.9 2 0 0 2 2 2 0 Photosystem II reaction centre T protein DUF5313 PF17240.2 ORF120966 - 7 7.1 7.9 7.8 7.0 7.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Synaptobrevin PF00957.21 ORF120566 - 0.049 13.4 0.2 0.094 12.5 0.1 1.4 2 0 0 2 2 2 0 Synaptobrevin NMDAR2_C PF10565.9 ORF119744 - 3.5 6.4 6.0 3.8 6.3 6.0 1.0 1 0 0 1 1 1 0 N-methyl D-aspartate receptor 2B3 C-terminus Mfa1 PF17445.2 ORF119669 - 0.5 10.4 9.8 0.095 12.7 6.2 1.7 1 1 1 2 2 2 0 Mating factor A1 Hyr1 PF15789.5 ORF118882 - 0.012 15.1 1.0 0.022 14.3 1.0 1.4 1 0 0 1 1 1 0 Hyphally regulated cell wall GPI-anchored protein 1 VirDNA-topo-I_N PF09266.10 ORF118652 - 0.078 13.1 0.0 0.11 12.7 0.0 1.4 1 1 0 1 1 1 0 Viral DNA topoisomerase I, N-terminal EGF_3 PF12947.7 ORF118473 - 0.22 11.8 5.0 6.1 7.1 5.0 2.2 1 1 0 1 1 1 0 EGF domain Ldr_toxin PF13940.6 ORF118187 - 2.8e-26 91.3 2.5 3.7e-26 90.9 2.5 1.2 1 0 0 1 1 1 1 Toxin Ldr, type I toxin-antitoxin system Adeno_E3B PF03376.14 ORF118136 - 0.51 10.6 2.7 1.3 9.3 1.8 1.8 1 1 1 2 2 2 0 Adenovirus E3B protein DHFR_2 PF06442.11 ORF117834 - 0.055 13.3 0.2 0.058 13.2 0.2 1.2 1 0 0 1 1 1 0 R67 dihydrofolate reductase DUF1133 PF06576.11 ORF117585 - 0.19 11.1 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1133) zinc-ribbon_6 PF10005.9 ORF117244 - 0.014 16.0 1.0 0.017 15.8 1.0 1.2 1 0 0 1 1 1 0 zinc-ribbon domain Crust_neurohorm PF01147.17 ORF117138 - 0.02 14.7 0.0 0.026 14.3 0.0 1.3 1 0 0 1 1 1 0 Crustacean CHH/MIH/GIH neurohormone family DUF5628 PF18621.1 ORF116821 - 0.037 14.5 0.0 0.04 14.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5628) Rabaptin PF03528.15 ORF116606 - 0.04 12.6 0.0 0.046 12.4 0.0 1.0 1 0 0 1 1 1 0 Rabaptin ATPase_2 PF01637.18 ORF116298 - 0.25 11.2 0.1 0.25 11.2 0.1 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea EB_dh PF09459.10 ORF115466 - 0.15 12.0 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Ethylbenzene dehydrogenase DHFR_2 PF06442.11 ORF115309 - 0.055 13.3 0.2 0.058 13.2 0.2 1.2 1 0 0 1 1 1 0 R67 dihydrofolate reductase DUF3902 PF13042.6 ORF115159 - 0.0094 15.5 1.1 0.01 15.4 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3902) DUF3810 PF12725.7 ORF115159 - 1 8.7 6.0 1 8.6 6.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) DDE_Tnp_1_5 PF13737.6 ORF115105 - 0.11 12.9 0.2 0.23 11.8 0.1 1.6 1 1 1 2 2 2 0 Transposase DDE domain DUF1966 PF09260.11 ORF114455 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1966) DUF4207 PF13904.6 ORF114148 - 0.075 12.7 0.1 0.075 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4207) CBP_BcsG PF11658.8 ORF113866 - 0.065 11.6 0.1 0.075 11.4 0.1 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG ABC_tran_CTD PF16326.5 ORF113664 - 0.0012 19.1 4.1 0.0012 19.1 4.1 1.5 2 0 0 2 2 2 1 ABC transporter C-terminal domain Ribosomal_L36 PF00444.18 ORF113664 - 0.037 14.2 1.3 0.32 11.3 0.3 2.1 2 0 0 2 2 2 0 Ribosomal protein L36 Pox_F12L PF03337.13 ORF113535 - 0.25 9.5 1.9 0.25 9.5 1.9 1.0 1 0 0 1 1 1 0 Poxvirus F12L protein Cyclotide PF03784.13 ORF111356 - 0.0045 17.0 1.0 0.0045 17.0 1.0 2.7 2 1 1 3 3 3 1 Cyclotide family 40S_S4_C PF16121.5 ORF110922 - 0.024 14.3 0.6 0.036 13.7 0.6 1.2 1 0 0 1 1 1 0 40S ribosomal protein S4 C-terminus DUF899 PF05988.12 ORF110490 - 0.22 11.0 0.0 0.22 11.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) Prolamin_like PF05617.11 ORF110308 - 0.025 14.8 0.4 0.032 14.4 0.4 1.1 1 0 0 1 1 1 0 Prolamin-like Acyl-CoA_dh_M PF02770.19 ORF109686 - 0.061 13.5 0.0 0.087 13.0 0.0 1.3 1 1 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain DUF4207 PF13904.6 ORF107979 - 0.075 12.7 0.1 0.075 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4207) Tachystatin_A PF11406.8 ORF107812 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A MIX PF18529.1 ORF107663 - 0.03 14.0 0.1 0.031 14.0 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins Arm PF00514.23 ORF107663 - 0.075 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Armadillo/beta-catenin-like repeat Vps4_C PF09336.10 ORF107642 - 0.16 12.0 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain Crust_neuro_H PF03858.13 ORF107234 - 0.17 12.7 1.5 3.7 8.4 0.1 2.2 2 0 0 2 2 2 0 Crustacean neurohormone H Homez PF11569.8 ORF10717 - 0.0028 17.1 0.2 0.0036 16.7 0.2 1.2 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez DUF4190 PF13828.6 ORF106702 - 0.065 13.0 0.5 0.25 11.1 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4190) Ion_trans PF00520.31 ORF103384 - 0.059 12.6 5.6 0.082 12.1 5.6 1.4 1 1 0 1 1 1 0 Ion transport protein Tachystatin_A PF11406.8 ORF103334 - 0.21 11.7 1.8 2.4 8.3 0.2 2.2 2 0 0 2 2 2 0 Antimicrobial peptide tachystatin A DUF302 PF03625.14 ORF102341 - 0.014 15.3 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF302 Ribosomal_L4 PF00573.22 ORF10200 - 0.17 11.6 0.3 0.19 11.4 0.3 1.0 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family DUF596 PF04591.12 ORF101623 - 0.045 13.9 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF596 DUF4046 PF13255.6 ORF101149 - 0.11 13.0 0.2 0.13 12.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4046) zf-C5HC2 PF02928.16 ORF101149 - 0.6 10.5 8.5 0.43 11.0 6.7 1.7 2 0 0 2 2 2 0 C5HC2 zinc finger zf-C2H2 PF00096.26 ORF10081 - 0.061 13.8 3.2 0.061 13.8 3.2 2.5 2 1 0 2 2 2 0 Zinc finger, C2H2 type EF-hand_11 PF08976.11 ORF10081 - 0.11 13.4 0.0 0.13 13.2 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain Peptidase_M24 PF00557.24 ORF100732 - 2.9e-06 27.1 0.1 4e-06 26.7 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF3975 PF13126.6 ORF100440 - 0.15 12.5 3.7 0.18 12.3 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) Imm53 PF15580.6 ORF100248 - 0.053 13.2 0.0 0.063 13.0 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 53 Zn_ribbon_17 PF17120.5 NODE_83973_length_190_cov_0.858065_g76032_i0forward_frame_1 - 0.38 10.4 0.2 0.38 10.4 0.2 2.0 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type DUF3740 PF12548.8 NODE_83971_length_190_cov_0.916129_g76030_i0forward_frame_1 - 0.1 13.0 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Sulfatase protein Fer4_3 PF12798.7 NODE_83960_length_190_cov_1.012903_g76019_i0reverse_frame_1 - 3.5 8.8 8.2 2.1 9.5 0.6 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Spec3 PF15795.5 NODE_83949_length_190_cov_1.019355_g76008_i0forward_frame_1 - 0.072 13.6 4.5 0.085 13.4 4.5 1.1 1 0 0 1 1 1 0 Ectodermal ciliogenesis protein INCA1 PF15142.6 NODE_83935_length_190_cov_1.025806_g75994_i0forward_frame_1 - 0.071 13.1 0.0 0.079 13.0 0.0 1.0 1 0 0 1 1 1 0 INCA1 DASH_Dam1 PF08653.10 NODE_83934_length_190_cov_1.025806_g75993_i0forward_frame_1 - 0.021 14.6 0.1 0.03 14.1 0.1 1.3 1 0 0 1 1 1 0 DASH complex subunit Dam1 DUF5083 PF16890.5 NODE_83929_length_190_cov_1.025806_g75988_i0reverse_frame_1 - 0.007 16.1 1.7 0.007 16.1 1.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5083) DUF4611 PF15387.6 NODE_83910_length_190_cov_1.032258_g75969_i0forward_frame_1 - 1.6 9.0 5.6 2 8.7 5.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) DUF624 PF04854.14 NODE_83904_length_190_cov_1.032258_g75963_i0reverse_frame_1 - 0.09 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF624 CP12 PF02672.15 NODE_83894_length_190_cov_1.032258_g75953_i0reverse_frame_1 - 0.14 13.0 0.0 0.17 12.6 0.0 1.2 1 0 0 1 1 1 0 CP12 domain Phage_attach PF05354.11 NODE_83893_length_190_cov_1.032258_g75952_i0forward_frame_1 - 0.059 13.3 0.0 0.059 13.3 0.0 1.1 1 0 0 1 1 1 0 Phage Head-Tail Attachment MRP-L20 PF12824.7 NODE_83885_length_190_cov_1.032258_g75944_i0forward_frame_1 - 0.0065 16.7 0.0 0.0065 16.7 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal protein subunit L20 MarR_2 PF12802.7 NODE_83885_length_190_cov_1.032258_g75944_i0forward_frame_1 - 0.022 14.7 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 MarR family HU-CCDC81_euk_2 PF18289.1 NODE_83885_length_190_cov_1.032258_g75944_i0forward_frame_1 - 0.11 12.7 0.0 0.28 11.3 0.0 1.6 1 1 1 2 2 2 0 CCDC81 eukaryotic HU domain 2 SPA PF08616.10 NODE_83869_length_190_cov_1.032258_g75928_i0forward_frame_1 - 0.13 12.2 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Stabilization of polarity axis Rieske PF00355.26 NODE_83868_length_190_cov_1.038710_g75927_i0reverse_frame_1 - 0.33 10.9 4.8 0.39 10.7 4.8 1.1 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain Peptidase_C74 PF12387.8 NODE_83868_length_190_cov_1.038710_g75927_i0reverse_frame_1 - 1.6 8.1 4.4 1.8 8.0 4.4 1.0 1 0 0 1 1 1 0 Pestivirus NS2 peptidase Transposase_21 PF02992.14 NODE_83867_length_190_cov_1.051613_g75926_i0forward_frame_1 - 6.7 5.9 7.3 6.4 6.0 7.3 1.1 1 0 0 1 1 1 0 Transposase family tnp2 CbbQ_C PF08406.10 NODE_83852_length_190_cov_1.090323_g75911_i0reverse_frame_1 - 0.11 12.8 0.3 0.35 11.1 0.3 1.7 1 1 0 1 1 1 0 CbbQ/NirQ/NorQ C-terminal EGF PF00008.27 NODE_83840_length_190_cov_1.129032_g75899_i0reverse_frame_1 - 0.018 15.4 0.1 0.023 15.0 0.1 1.2 1 0 0 1 1 1 0 EGF-like domain EGF_CA PF07645.15 NODE_83840_length_190_cov_1.129032_g75899_i0reverse_frame_1 - 0.055 13.7 0.4 0.092 13.0 0.4 1.3 1 0 0 1 1 1 0 Calcium-binding EGF domain CSS-motif PF12792.7 NODE_83836_length_190_cov_1.148387_g75895_i0forward_frame_1 - 0.13 11.7 0.1 0.14 11.6 0.1 1.0 1 0 0 1 1 1 0 CSS motif domain associated with EAL YfbU PF03887.14 NODE_83832_length_190_cov_1.161290_g75891_i0reverse_frame_1 - 0.041 13.9 0.1 0.63 10.0 0.0 1.9 1 1 1 2 2 2 0 YfbU domain NOB1_Zn_bind PF08772.11 NODE_83831_length_190_cov_1.167742_g75890_i0forward_frame_1 - 0.0027 17.8 0.2 0.0039 17.3 0.2 1.2 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like DUF5540 PF17694.1 NODE_83822_length_190_cov_1.206452_g75881_i0reverse_frame_1 - 0.00071 20.0 0.2 0.00085 19.8 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5540) Ribosomal_S15 PF00312.22 NODE_83815_length_190_cov_1.225806_g75874_i0reverse_frame_1 - 0.13 12.5 0.4 0.16 12.2 0.4 1.0 1 0 0 1 1 1 0 Ribosomal protein S15 Binary_toxB PF03495.14 NODE_83807_length_190_cov_1.270968_g75866_i0forward_frame_1 - 0.024 14.8 0.1 0.039 14.2 0.0 1.4 1 1 0 1 1 1 0 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain DUF3755 PF12579.8 NODE_83800_length_190_cov_1.277419_g75859_i0reverse_frame_1 - 0.0052 16.4 0.4 0.0096 15.5 0.4 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF3755) Lig_chan PF00060.26 NODE_83796_length_190_cov_1.283871_g75855_i0reverse_frame_1 - 0.056 13.3 0.1 0.057 13.3 0.1 1.1 1 0 0 1 1 1 0 Ligand-gated ion channel SelR PF01641.18 NODE_83784_length_190_cov_1.290323_g75843_i0reverse_frame_1 - 0.03 14.4 0.2 0.032 14.3 0.2 1.1 1 0 0 1 1 1 0 SelR domain Vps36-NZF-N PF16988.5 NODE_83771_length_190_cov_1.335484_g75830_i0forward_frame_1 - 0.016 14.6 0.9 0.02 14.2 0.9 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain RFX5_N PF18326.1 NODE_83770_length_190_cov_1.348387_g75829_i0forward_frame_1 - 0.04 13.7 0.2 0.049 13.4 0.2 1.2 1 0 0 1 1 1 0 RFX5 N-terminal domain IQ PF00612.27 NODE_83770_length_190_cov_1.348387_g75829_i0forward_frame_1 - 0.13 12.2 4.4 0.16 11.9 0.9 2.3 2 0 0 2 2 2 0 IQ calmodulin-binding motif HTH_micro PF17007.5 NODE_83763_length_190_cov_1.393548_g75822_i0forward_frame_1 - 0.051 12.4 0.0 0.059 12.2 0.0 1.0 1 0 0 1 1 1 0 HTH-like RL11D PF11088.8 NODE_83762_length_190_cov_1.406452_g75821_i0forward_frame_1 - 0.048 13.9 0.1 0.05 13.9 0.1 1.1 1 0 0 1 1 1 0 Glycoprotein encoding membrane proteins RL5A and RL6 RelB PF04221.12 NODE_83759_length_190_cov_1.412903_g75818_i0forward_frame_1 - 0.049 13.6 0.0 0.058 13.4 0.0 1.2 1 0 0 1 1 1 0 RelB antitoxin Spike_torovirin PF17072.5 NODE_83755_length_190_cov_1.419355_g75814_i0forward_frame_1 - 0.0077 13.5 0.2 0.0077 13.5 0.2 1.0 1 0 0 1 1 1 1 Torovirinae spike glycoprotein Mg_chelatase_C PF13335.6 NODE_83748_length_190_cov_1.451613_g75807_i0reverse_frame_1 - 0.077 13.6 0.0 0.077 13.6 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI C-terminal SLC35F PF06027.12 NODE_83744_length_190_cov_1.464516_g75803_i0forward_frame_1 - 2.4 7.6 8.3 2.5 7.5 8.3 1.2 1 0 0 1 1 1 0 Solute carrier family 35 Albumin_I_a PF16720.5 NODE_83743_length_190_cov_1.470968_g75802_i0reverse_frame_1 - 0.062 13.2 0.0 0.095 12.6 0.0 1.3 1 0 0 1 1 1 0 Albumin I chain a Pox_G9-A16 PF03003.16 NODE_83740_length_190_cov_1.470968_g75799_i0forward_frame_1 - 0.067 12.9 1.5 0.088 12.5 1.5 1.2 1 1 0 1 1 1 0 Pox virus entry-fusion-complex G9/A16 DUF5528 PF17666.1 NODE_83740_length_190_cov_1.470968_g75799_i0forward_frame_1 - 0.23 11.4 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5528) PARP PF00644.20 NODE_83728_length_190_cov_1.522581_g75787_i0reverse_frame_1 - 0.00013 21.6 0.0 0.00015 21.5 0.0 1.1 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DUF3710 PF12502.8 NODE_83727_length_190_cov_1.529032_g75786_i0forward_frame_1 - 0.084 12.5 0.0 0.084 12.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3710) XisI PF08869.11 NODE_83717_length_190_cov_1.541935_g75776_i0forward_frame_1 - 0.028 14.8 0.1 0.029 14.7 0.1 1.0 1 0 0 1 1 1 0 XisI protein Clathrin_lg_ch PF01086.17 NODE_83717_length_190_cov_1.541935_g75776_i0forward_frame_1 - 0.034 14.2 1.0 0.037 14.1 1.0 1.0 1 0 0 1 1 1 0 Clathrin light chain HSCB_C PF07743.13 NODE_83717_length_190_cov_1.541935_g75776_i0forward_frame_1 - 0.081 13.4 2.8 0.098 13.2 2.8 1.2 1 0 0 1 1 1 0 HSCB C-terminal oligomerisation domain TRAM1 PF08390.11 NODE_83714_length_190_cov_1.541935_g75773_i0reverse_frame_1 - 0.059 13.0 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 TRAM1-like protein Chlam_OMP3 PF03503.13 NODE_83698_length_190_cov_1.548387_g75757_i0forward_frame_1 - 0.032 14.5 0.4 0.043 14.1 0.4 1.1 1 0 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 3 DUF3390 PF11870.8 NODE_83689_length_190_cov_1.548387_g75748_i0forward_frame_1 - 0.026 14.9 0.0 0.033 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) Pro-MCH PF05824.12 NODE_83689_length_190_cov_1.548387_g75748_i0forward_frame_1 - 0.043 13.7 0.1 0.065 13.2 0.1 1.3 1 1 0 1 1 1 0 Pro-melanin-concentrating hormone (Pro-MCH) DUF4645 PF15488.6 NODE_83687_length_190_cov_1.548387_g75746_i0forward_frame_1 - 0.12 11.8 0.1 0.13 11.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4645) Flavi_NS4B PF01349.17 NODE_83679_length_190_cov_1.612903_g75738_i0forward_frame_1 - 0.0058 16.0 0.1 0.0061 16.0 0.1 1.0 1 0 0 1 1 1 1 Flavivirus non-structural protein NS4B Rep_fac-A_C PF08646.10 NODE_83675_length_190_cov_1.625806_g75734_i0reverse_frame_1 - 0.0095 15.7 0.8 0.011 15.5 0.8 1.0 1 0 0 1 1 1 1 Replication factor-A C terminal domain IBN_N PF03810.19 NODE_83666_length_190_cov_1.683871_g75725_i0forward_frame_1 - 0.042 13.8 0.0 0.064 13.2 0.0 1.3 1 0 0 1 1 1 0 Importin-beta N-terminal domain Raf1_HTH PF18579.1 NODE_83661_length_190_cov_1.716129_g75720_i0reverse_frame_1 - 0.037 13.7 0.0 0.048 13.3 0.0 1.2 1 0 0 1 1 1 0 Rubisco accumulation factor 1 helix turn helix domain MYCBPAP PF14646.6 NODE_83651_length_190_cov_1.793548_g75710_i0reverse_frame_1 - 3e-08 33.0 0.1 3.2e-08 33.0 0.1 1.0 1 0 0 1 1 1 1 MYCBP-associated protein family Rubella_Capsid PF05750.11 NODE_83645_length_190_cov_1.838710_g75704_i0forward_frame_1 - 0.013 15.1 0.9 0.015 14.9 0.9 1.0 1 0 0 1 1 1 0 Rubella capsid protein Cpn60_TCP1 PF00118.24 NODE_83644_length_190_cov_1.845161_g75703_i0forward_frame_1 - 7.9e-06 24.8 0.1 8.2e-06 24.7 0.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family NADH-G_4Fe-4S_3 PF10588.9 NODE_83639_length_190_cov_1.890323_g75698_i0forward_frame_1 - 0.029 13.9 0.1 0.049 13.2 0.1 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region zf-LITAF-like PF10601.9 NODE_83638_length_190_cov_1.896774_g75697_i0forward_frame_1 - 1.5e-09 38.0 15.0 1.6e-09 37.9 15.0 1.0 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain HEV_ORF1 PF02444.16 NODE_83633_length_190_cov_1.916129_g75692_i0reverse_frame_1 - 0.2 12.3 3.3 0.21 12.2 3.3 1.2 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) YwcE PF17368.2 NODE_83632_length_190_cov_1.922581_g75691_i0forward_frame_1 - 0.006 17.2 5.8 0.0068 17.0 5.8 1.0 1 0 0 1 1 1 1 Spore morphogenesis and germination YwcE TMCO5 PF14992.6 NODE_83632_length_190_cov_1.922581_g75691_i0forward_frame_1 - 2.7 7.5 5.5 2.7 7.5 5.5 1.1 1 0 0 1 1 1 0 TMCO5 family Fer4_7 PF12838.7 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 7.7e-05 23.2 1.9 9.6e-05 22.9 1.9 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.011 16.2 1.6 0.011 16.1 1.6 1.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.013 15.7 4.8 0.014 15.5 4.8 1.5 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.023 15.3 0.9 0.025 15.1 0.9 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_6 PF12837.7 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.084 13.0 3.4 0.084 13.0 3.4 1.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_10 PF13237.6 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.38 10.9 5.7 0.52 10.5 5.7 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.46 10.7 8.1 0.29 11.3 6.0 1.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 0.63 10.7 7.8 0.14 12.7 4.5 1.8 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 NODE_83626_length_190_cov_1.954839_g75685_i0forward_frame_1 - 7.6 6.5 11.9 1.4 8.9 8.1 1.8 2 0 0 2 2 2 0 4Fe-4S binding domain DUF4139 PF13598.6 NODE_83623_length_190_cov_1.974194_g75682_i0reverse_frame_1 - 0.079 12.7 0.0 0.082 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4139) Megourin PF17560.2 NODE_83620_length_190_cov_2.006452_g75679_i0forward_frame_1 - 0.038 14.2 0.5 0.049 13.9 0.5 1.2 1 0 0 1 1 1 0 Aphid Megourins Glyco_hydro_36C PF16874.5 NODE_83618_length_190_cov_2.019355_g75677_i0reverse_frame_1 - 0.11 13.0 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 36 C-terminal domain DUF929 PF06053.11 NODE_83614_length_190_cov_2.045161_g75673_i0forward_frame_1 - 3.3 7.0 5.4 3.4 6.9 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) EphA2_TM PF14575.6 NODE_83614_length_190_cov_2.045161_g75673_i0forward_frame_1 - 4.2 8.3 5.0 4.5 8.2 5.0 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Nod1 PF17114.5 NODE_83612_length_190_cov_2.051613_g75671_i0forward_frame_1 - 0.014 15.6 0.1 0.017 15.3 0.1 1.3 1 1 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 PIG-P PF08510.12 NODE_83604_length_190_cov_2.083871_g75663_i0reverse_frame_1 - 0.029 14.3 1.1 0.031 14.2 1.1 1.0 1 0 0 1 1 1 0 PIG-P DUF2783 PF10932.8 NODE_83599_length_190_cov_2.141935_g75658_i0forward_frame_1 - 0.1 12.3 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2783) HTH_7 PF02796.15 NODE_83596_length_190_cov_2.154839_g75655_i0reverse_frame_1 - 0.12 12.4 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase zf-CCHC_2 PF13696.6 NODE_83595_length_190_cov_2.174194_g75654_i0reverse_frame_1 - 6.2 6.8 8.6 2.1 8.3 0.5 2.6 3 0 0 3 3 3 0 Zinc knuckle DUF4518 PF15008.6 NODE_83595_length_190_cov_2.174194_g75654_i0forward_frame_1 - 0.49 9.5 2.7 0.52 9.5 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4518) DUF2417 PF10329.9 NODE_83589_length_190_cov_2.270968_g75648_i0forward_frame_1 - 0.055 12.9 5.5 0.063 12.7 5.5 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) HTH_OrfB_IS605 PF12323.8 NODE_83587_length_190_cov_2.303226_g75646_i0forward_frame_1 - 0.13 11.8 0.6 0.22 11.1 0.6 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Anoctamin PF04547.12 NODE_83586_length_190_cov_2.309677_g75645_i0forward_frame_1 - 0.0038 16.1 0.0 0.0041 16.0 0.0 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel DUF3954 PF13128.6 NODE_83579_length_190_cov_2.361290_g75638_i0forward_frame_1 - 0.011 15.6 0.4 0.016 15.0 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3954) ANAPC4 PF12896.7 NODE_83570_length_190_cov_2.483871_g75629_i0reverse_frame_1 - 1.3e-06 28.1 0.2 1.4e-06 27.9 0.2 1.0 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 4 TRPM_tetra PF16519.5 NODE_83570_length_190_cov_2.483871_g75629_i0reverse_frame_1 - 0.011 15.9 1.5 0.018 15.1 1.5 1.3 1 1 0 1 1 1 0 Tetramerisation domain of TRPM Fibrillin_U_N PF18193.1 NODE_83564_length_190_cov_2.541935_g75623_i0reverse_frame_1 - 1 9.5 5.1 0.33 11.1 1.7 2.1 2 1 0 2 2 2 0 Fibrillin 1 unique N-terminal domain Neurokinin_B PF03823.14 NODE_83549_length_190_cov_2.774194_g75608_i0forward_frame_1 - 0.09 12.8 0.5 3 8.0 0.2 2.2 2 0 0 2 2 2 0 Neurokinin B IcmF-related PF06761.12 NODE_83545_length_190_cov_2.916129_g75604_i0reverse_frame_1 - 0.092 12.2 0.0 0.096 12.2 0.0 1.0 1 0 0 1 1 1 0 Intracellular multiplication and human macrophage-killing DUF2384 PF09722.10 NODE_83542_length_190_cov_3.103226_g75601_i0forward_frame_1 - 0.075 13.1 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2384) LysE PF01810.18 NODE_83540_length_190_cov_3.141935_g75599_i0forward_frame_1 - 1.1e-15 57.7 3.0 1.3e-15 57.4 3.0 1.1 1 0 0 1 1 1 1 LysE type translocator RhodobacterPufX PF11511.8 NODE_83540_length_190_cov_3.141935_g75599_i0forward_frame_1 - 3.4 7.4 6.2 1.1 9.0 3.6 1.5 1 1 0 2 2 2 0 Intrinsic membrane protein PufX Lamprin PF06403.11 NODE_83539_length_190_cov_3.154839_g75598_i0reverse_frame_1 - 0.00055 19.9 22.1 0.017 15.1 10.2 2.0 1 1 1 2 2 2 2 Lamprin Cor1 PF04803.12 NODE_83531_length_190_cov_3.658065_g75590_i0forward_frame_1 - 0.016 15.4 6.3 0.019 15.2 6.3 1.2 1 0 0 1 1 1 0 Cor1/Xlr/Xmr conserved region Tup_N PF08581.10 NODE_83531_length_190_cov_3.658065_g75590_i0forward_frame_1 - 0.062 13.6 3.8 0.11 12.9 3.5 1.5 1 1 0 1 1 1 0 Tup N-terminal DUF2742 PF10888.8 NODE_83523_length_190_cov_6.400000_g75582_i0forward_frame_1 - 0.18 12.1 1.8 0.25 11.6 0.4 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2742) NDUF_B4 PF07225.12 NODE_83521_length_190_cov_15.503226_g75580_i0reverse_frame_1 - 0.02 14.8 1.7 0.027 14.4 1.7 1.4 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) Peptidase_S49_N PF08496.10 NODE_83521_length_190_cov_15.503226_g75580_i0reverse_frame_1 - 7.3 6.6 11.3 8.3 6.5 11.3 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Hanta_G2 PF01561.16 NODE_83520_length_190_cov_16.780645_g75579_i0forward_frame_1 - 0.0093 14.6 0.3 0.01 14.5 0.3 1.0 1 0 0 1 1 1 1 Hantavirus glycoprotein G2 RST PF12174.8 NODE_83512_length_190_cov_19.948387_g75571_i0reverse_frame_1 - 0.045 13.7 2.2 0.066 13.1 2.2 1.4 1 1 0 1 1 1 0 RCD1-SRO-TAF4 (RST) plant domain FixQ PF05545.11 NODE_83510_length_190_cov_21.270968_g75569_i0reverse_frame_1 - 1.8 8.6 8.9 3.5 7.7 8.9 1.4 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ Flagellar_put PF12611.8 NODE_83505_length_190_cov_27.741935_g75564_i0forward_frame_1 - 0.13 12.0 0.5 0.2 11.5 0.5 1.3 1 0 0 1 1 1 0 Putative flagellar TSGP1 PF07771.11 NODE_83504_length_190_cov_27.832258_g75563_i0forward_frame_1 - 0.035 14.3 0.3 0.039 14.1 0.3 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 DUF1176 PF06674.11 NODE_83504_length_190_cov_27.832258_g75563_i0forward_frame_1 - 0.046 13.2 0.0 0.046 13.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1176) GPR_Gpa2_C PF11970.8 NODE_83493_length_190_cov_33.967742_g75552_i0forward_frame_1 - 0.011 15.7 0.5 0.017 15.2 0.5 1.4 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term zf-RING_2 PF13639.6 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 8e-07 29.3 0.8 9.9e-07 29.0 0.8 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 1.3e-05 24.9 2.8 1.7e-05 24.5 2.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 1.5e-05 25.1 0.3 1.9e-05 24.8 0.3 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.00012 21.9 1.9 0.00017 21.4 1.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.00014 21.8 0.5 0.00018 21.4 0.5 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.00098 18.8 0.2 0.0017 18.1 0.2 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.0024 17.8 1.0 0.0037 17.3 1.0 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.01 15.6 0.4 0.014 15.2 0.4 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_2 PF13240.6 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.023 14.4 1.0 0.023 14.4 1.0 1.7 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.9 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.03 14.4 0.5 0.03 14.4 0.5 1.7 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-ANAPC11 PF12861.7 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.043 13.9 0.1 0.053 13.6 0.1 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING-like PF08746.11 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.097 13.0 2.8 0.14 12.5 2.8 1.2 1 0 0 1 1 1 0 RING-like domain DUF3637 PF12337.8 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.11 12.9 0.9 1.7 9.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3637) Zn-ribbon_8 PF09723.10 NODE_83491_length_190_cov_34.509677_g75550_i0reverse_frame_1 - 0.12 12.5 1.0 0.2 11.8 1.0 1.3 1 0 0 1 1 1 0 Zinc ribbon domain TEP1_N PF05386.11 NODE_83491_length_190_cov_34.509677_g75550_i0forward_frame_1 - 0.0058 16.2 0.1 0.0086 15.6 0.1 1.3 1 0 0 1 1 1 1 TEP1 N-terminal domain GPR15L PF15854.5 NODE_83490_length_190_cov_34.722581_g75549_i0reverse_frame_1 - 2.1 8.6 6.9 2.6 8.3 6.9 1.2 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 MTHFR_C PF12225.8 NODE_83484_length_190_cov_37.967742_g75543_i0reverse_frame_1 - 0.033 13.8 0.2 0.053 13.2 0.2 1.3 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal RPW8 PF05659.11 NODE_83483_length_190_cov_38.090323_g75542_i0reverse_frame_1 - 0.095 12.4 0.0 0.1 12.3 0.0 1.0 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF3473 PF11959.8 NODE_83483_length_190_cov_38.090323_g75542_i0forward_frame_1 - 0.024 14.7 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3473) UCH PF00443.29 NODE_83482_length_190_cov_38.838710_g75541_i0reverse_frame_1 - 0.0028 17.2 0.1 0.0035 16.9 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase PPO1_DWL PF12142.8 NODE_83481_length_190_cov_39.122581_g75540_i0forward_frame_1 - 0.06 13.1 0.1 0.084 12.7 0.1 1.3 1 0 0 1 1 1 0 Polyphenol oxidase middle domain Herpes_glycop_D PF01537.17 NODE_83476_length_190_cov_43.877419_g75535_i0reverse_frame_1 - 0.041 14.0 0.2 0.043 14.0 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein D/GG/GX domain TraF PF13728.6 NODE_83474_length_190_cov_44.212903_g75533_i0reverse_frame_1 - 0.25 11.1 1.3 0.25 11.1 1.3 1.2 1 1 0 1 1 1 0 F plasmid transfer operon protein ORC6 PF05460.13 NODE_83469_length_190_cov_49.006452_g75528_i0reverse_frame_1 - 0.032 13.5 1.3 0.034 13.4 1.3 1.0 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) T4-gp15_tss PF16724.5 NODE_83460_length_190_cov_61.574194_g75519_i0forward_frame_1 - 0.0014 18.4 0.0 0.0016 18.3 0.0 1.0 1 0 0 1 1 1 1 T4-like virus Myoviridae tail sheath stabiliser UPF0542 PF15086.6 NODE_83459_length_190_cov_62.167742_g75518_i0forward_frame_1 - 0.44 10.5 2.8 0.63 10.0 2.8 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 Toxin_24 PF08094.11 NODE_83456_length_190_cov_68.058065_g75515_i0forward_frame_1 - 0.02 14.7 0.4 0.032 14.0 0.4 1.3 1 0 0 1 1 1 0 Conotoxin TVIIA/GS family SH3_15 PF18346.1 NODE_83455_length_190_cov_68.903226_g75514_i0forward_frame_1 - 0.22 11.8 0.0 0.26 11.7 0.0 1.1 1 0 0 1 1 1 0 Mind bomb SH3 repeat domain Abi_C PF14355.6 NODE_83452_length_190_cov_77.587097_g75511_i0reverse_frame_1 - 0.16 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Abortive infection C-terminus preSET_CXC PF18264.1 NODE_83437_length_190_cov_242.593548_g75496_i0reverse_frame_1 - 0.084 13.4 10.8 0.54 10.8 6.0 2.2 2 0 0 2 2 2 0 CXC domain GlutR_N PF05201.15 NODE_83425_length_191_cov_0.891026_g75484_i0reverse_frame_1 - 0.058 13.2 0.0 0.061 13.1 0.0 1.1 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, N-terminal domain dTDP_sugar_isom PF00908.17 NODE_83424_length_191_cov_0.923077_g75483_i0reverse_frame_1 - 0.12 12.1 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 dTDP-4-dehydrorhamnose 3,5-epimerase DUF2897 PF11446.8 NODE_83423_length_191_cov_0.923077_g75482_i0reverse_frame_1 - 2.2 8.2 8.7 0.34 10.8 1.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2897) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks423.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks423.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks423.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks423.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:42:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Fer2_2 PF01799.20 NODE_83421_length_191_cov_0.935897_g75480_i0forward_frame_1 - 0.053 13.6 0.1 0.056 13.5 0.1 1.2 1 0 0 1 1 1 0 [2Fe-2S] binding domain ADAM_CR_2 PF17771.1 NODE_83416_length_191_cov_0.993590_g75475_i0forward_frame_1 - 0.044 14.3 0.0 0.045 14.3 0.0 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich domain zf-C4H2 PF10146.9 NODE_83412_length_191_cov_1.019231_g75471_i0reverse_frame_1 - 0.47 10.7 3.5 0.53 10.6 3.5 1.0 1 0 0 1 1 1 0 Zinc finger-containing protein DHODB_Fe-S_bind PF10418.9 NODE_83402_length_191_cov_1.019231_g75461_i0reverse_frame_1 - 0.13 12.1 0.4 7.8 6.4 0.1 2.1 2 0 0 2 2 2 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PRIMA1 PF16101.5 NODE_83390_length_191_cov_1.025641_g75449_i0reverse_frame_1 - 0.34 11.0 5.1 0.38 10.8 5.1 1.0 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 DCA16 PF15349.6 NODE_83382_length_191_cov_1.025641_g75441_i0reverse_frame_1 - 0.13 11.9 0.2 0.13 11.8 0.2 1.0 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 Alb1 PF09135.11 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_1 - 0.15 13.0 1.7 0.17 12.8 1.7 1.1 1 0 0 1 1 1 0 Alb1 Chorion_2 PF03964.15 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_1 - 2.4 9.0 5.0 2.6 9.0 5.0 1.1 1 0 0 1 1 1 0 Chorion family 2 IQCJ-SCHIP1 PF15157.6 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_1 - 7 6.5 6.8 7.6 6.4 6.8 1.1 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif SR-25 PF10500.9 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_1 - 8 6.0 9.9 8.9 5.9 9.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3888 PF13027.6 NODE_83368_length_191_cov_1.025641_g75427_i0reverse_frame_1 - 0.048 14.1 0.0 0.064 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3888) Op_neuropeptide PF08035.11 NODE_83355_length_191_cov_1.025641_g75414_i0reverse_frame_1 - 0.15 11.9 0.4 0.22 11.4 0.4 1.3 1 0 0 1 1 1 0 Opioids neuropeptide AAA_lid_3 PF17862.1 NODE_83344_length_191_cov_1.025641_g75403_i0forward_frame_1 - 0.1 12.4 0.2 0.16 11.8 0.2 1.2 1 0 0 1 1 1 0 AAA+ lid domain NAD-GH PF10712.9 NODE_83340_length_191_cov_1.025641_g75399_i0reverse_frame_1 - 0.059 11.8 0.1 0.067 11.6 0.1 1.0 1 0 0 1 1 1 0 NAD-specific glutamate dehydrogenase VWA_CoxE PF05762.14 NODE_83339_length_191_cov_1.025641_g75398_i0reverse_frame_1 - 0.16 11.4 1.1 0.17 11.3 1.1 1.0 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein Pkinase PF00069.25 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 6.4e-17 61.8 0.0 6.5e-17 61.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 3e-12 46.4 0.0 3.1e-12 46.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 0.00011 21.1 0.0 0.00012 21.0 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 0.00012 21.5 0.0 0.00012 21.5 0.0 1.0 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 0.022 13.7 0.0 0.022 13.7 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 NODE_83333_length_191_cov_1.057692_g75392_i0forward_frame_1 - 0.086 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Phosphotransferase enzyme family SopA_C PF13979.6 NODE_83326_length_191_cov_1.102564_g75385_i0reverse_frame_1 - 0.036 13.8 0.1 0.037 13.8 0.1 1.1 1 0 0 1 1 1 0 SopA-like catalytic domain PcF PF09461.10 NODE_83325_length_191_cov_1.102564_g75384_i0forward_frame_1 - 0.06 13.7 2.4 0.06 13.7 2.4 2.0 2 0 0 2 2 2 0 Phytotoxin PcF protein ThiP_synth PF10120.9 NODE_83322_length_191_cov_1.108974_g75381_i0reverse_frame_1 - 0.13 11.9 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Thiamine-phosphate synthase PRKCSH-like PF12999.7 NODE_83320_length_191_cov_1.121795_g75379_i0reverse_frame_1 - 0.0038 17.0 0.2 0.0039 17.0 0.2 1.1 1 0 0 1 1 1 1 Glucosidase II beta subunit-like DUF5645 PF18713.1 NODE_83319_length_191_cov_1.128205_g75378_i0reverse_frame_1 - 0.059 13.7 0.3 0.059 13.7 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5645) Chlam_OMP3 PF03503.13 NODE_83318_length_191_cov_1.128205_g75377_i0forward_frame_1 - 0.11 12.9 1.3 0.15 12.4 1.3 1.4 1 1 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 3 Spore_YabQ PF09578.10 NODE_83314_length_191_cov_1.141026_g75373_i0reverse_frame_1 - 0.12 12.6 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) Inhibitor_I53 PF11714.8 NODE_83306_length_191_cov_1.185897_g75365_i0reverse_frame_1 - 0.39 11.0 5.3 0.18 12.0 3.5 1.4 1 1 1 2 2 2 0 Thrombin inhibitor Madanin Chlam_PMP PF02415.17 NODE_83303_length_191_cov_1.205128_g75362_i0reverse_frame_1 - 0.00086 19.6 7.1 0.0018 18.7 0.1 3.1 3 0 0 3 3 3 1 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat CARM1 PF11531.8 NODE_83294_length_191_cov_1.224359_g75353_i0reverse_frame_1 - 0.034 14.3 0.1 0.037 14.2 0.1 1.1 1 0 0 1 1 1 0 Coactivator-associated arginine methyltransferase 1 N terminal Planc_extracel PF07595.12 NODE_83294_length_191_cov_1.224359_g75353_i0forward_frame_1 - 0.0016 18.1 2.2 0.0035 17.0 2.2 1.6 1 0 0 1 1 1 1 Planctomycete extracellular PBP1_TM PF14812.6 NODE_83294_length_191_cov_1.224359_g75353_i0forward_frame_1 - 0.11 12.9 4.2 0.12 12.7 4.2 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Phospholamban PF04272.14 NODE_83291_length_191_cov_1.230769_g75350_i0forward_frame_1 - 0.67 9.5 8.4 1 8.9 8.4 1.2 1 0 0 1 1 1 0 Phospholamban DUF2857 PF11198.8 NODE_83289_length_191_cov_1.237179_g75348_i0forward_frame_1 - 0.013 15.3 0.1 0.014 15.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2857) FBA_2 PF07735.17 NODE_83283_length_191_cov_1.262821_g75342_i0reverse_frame_1 - 0.0065 16.6 0.9 0.0086 16.2 0.9 1.1 1 0 0 1 1 1 1 F-box associated Sua5_yciO_yrdC PF01300.18 NODE_83280_length_191_cov_1.275641_g75339_i0reverse_frame_1 - 8.1e-18 64.5 0.0 8.4e-18 64.5 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination cNMP_binding PF00027.29 NODE_83278_length_191_cov_1.275641_g75337_i0reverse_frame_1 - 1.6e-06 28.1 0.0 1.8e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain bZIP_1 PF00170.21 NODE_83277_length_191_cov_1.275641_g75336_i0forward_frame_1 - 0.22 11.7 3.5 6.5 6.9 0.8 2.1 2 0 0 2 2 2 0 bZIP transcription factor Siva PF05458.12 NODE_83275_length_191_cov_1.275641_g75334_i0forward_frame_1 - 0.73 9.5 7.7 0.78 9.4 7.7 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) DUF5373 PF17343.2 NODE_83273_length_191_cov_1.282051_g75332_i0forward_frame_1 - 0.039 13.8 2.0 0.045 13.6 2.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5373) DUF4487 PF14868.6 NODE_83270_length_191_cov_1.282051_g75329_i0forward_frame_1 - 0.0084 15.0 0.1 0.0096 14.8 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4487) MGC-24 PF05283.11 NODE_83263_length_191_cov_1.288462_g75322_i0reverse_frame_1 - 0.22 12.0 2.1 0.23 11.9 2.1 1.0 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin CPSase_L_D3 PF02787.19 NODE_83258_length_191_cov_1.307692_g75317_i0forward_frame_1 - 5.7e-14 52.5 0.0 5.7e-14 52.5 0.0 1.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DUF5560 PF17715.1 NODE_83257_length_191_cov_1.314103_g75316_i0reverse_frame_1 - 0.001 18.5 2.2 0.0011 18.5 2.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5560) KRTAP PF11759.8 NODE_83251_length_191_cov_1.326923_g75310_i0forward_frame_1 - 0.12 12.9 10.7 0.22 12.1 10.8 1.5 1 1 0 1 1 1 0 Keratin-associated matrix Ste5_C PF12194.8 NODE_83242_length_191_cov_1.371795_g75301_i0reverse_frame_1 - 0.0048 16.9 0.2 0.0062 16.5 0.2 1.2 1 0 0 1 1 1 1 Protein kinase Fus3-binding RIH_assoc PF08454.11 NODE_83238_length_191_cov_1.403846_g75297_i0forward_frame_1 - 0.047 13.6 0.1 0.049 13.5 0.1 1.2 1 0 0 1 1 1 0 RyR and IP3R Homology associated UPF0139 PF03669.13 NODE_83237_length_191_cov_1.403846_g75296_i0forward_frame_1 - 0.0073 16.2 4.1 0.0082 16.0 4.1 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0139) NAGLU_N PF12971.7 NODE_83230_length_191_cov_1.435897_g75289_i0forward_frame_1 - 0.014 15.1 0.0 0.016 15.0 0.0 1.2 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain Hep_core_N PF08290.11 NODE_83219_length_191_cov_1.493590_g75278_i0reverse_frame_1 - 0.77 9.8 5.5 3.9 7.5 1.5 2.2 1 1 1 2 2 2 0 Hepatitis core protein, putative zinc finger zinc_ribbon_2 PF13240.6 NODE_83218_length_191_cov_1.493590_g75277_i0reverse_frame_1 - 0.011 15.5 1.2 0.029 14.1 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain MSL2-CXC PF16682.5 NODE_83214_length_191_cov_1.500000_g75273_i0reverse_frame_1 - 0.088 13.0 4.5 0.13 12.4 4.5 1.1 1 0 0 1 1 1 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Herpes_US12 PF05363.12 NODE_83213_length_191_cov_1.506410_g75272_i0reverse_frame_1 - 0.087 13.5 0.4 0.11 13.3 0.4 1.2 1 0 0 1 1 1 0 Herpesvirus US12 family Kelch_1 PF01344.25 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 3.9e-11 42.3 0.1 4.7e-11 42.1 0.1 1.1 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 4.9e-09 36.2 0.1 6.1e-09 35.9 0.1 1.1 1 0 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 9.1e-09 35.1 0.3 9.1e-09 35.1 0.3 1.6 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 4.4e-08 33.0 0.0 6.9e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 6.3e-08 32.7 0.3 0.00011 22.4 0.1 2.2 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 NODE_83212_length_191_cov_1.506410_g75271_i0forward_frame_1 - 1.1e-07 31.5 0.1 1.8e-07 30.9 0.1 1.3 1 0 0 1 1 1 1 Kelch motif DUF2237 PF09996.9 NODE_83204_length_191_cov_1.525641_g75263_i0forward_frame_1 - 0.13 12.3 0.1 0.2 11.6 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2237) DUF1280 PF06918.14 NODE_83203_length_191_cov_1.525641_g75262_i0reverse_frame_1 - 0.029 14.0 0.1 0.029 14.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1280) KH_dom-like PF14714.6 NODE_83203_length_191_cov_1.525641_g75262_i0reverse_frame_1 - 0.23 11.8 3.0 0.26 11.6 3.0 1.2 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Vicilin_N PF04702.12 NODE_83192_length_191_cov_1.532051_g75251_i0reverse_frame_1 - 0.016 15.1 1.9 0.016 15.1 1.9 1.1 1 0 0 1 1 1 0 Vicilin N terminal region DUF5398 PF17376.2 NODE_83188_length_191_cov_1.538462_g75247_i0forward_frame_1 - 0.0062 17.1 3.4 0.0065 17.1 3.4 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5398) DEK_C PF08766.11 NODE_83188_length_191_cov_1.538462_g75247_i0forward_frame_1 - 0.046 13.7 0.2 0.046 13.7 0.2 1.7 2 0 0 2 2 2 0 DEK C terminal domain ATP_bind_1 PF03029.17 NODE_83188_length_191_cov_1.538462_g75247_i0forward_frame_1 - 0.07 12.9 0.1 0.071 12.9 0.1 1.0 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein LBR_tudor PF09465.10 NODE_83182_length_191_cov_1.538462_g75241_i0reverse_frame_1 - 0.047 13.5 0.0 0.057 13.2 0.0 1.2 1 0 0 1 1 1 0 Lamin-B receptor of TUDOR domain UPF0565 PF10561.9 NODE_83178_length_191_cov_1.538462_g75237_i0reverse_frame_1 - 0.044 13.0 0.9 0.049 12.8 0.9 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 TB2_DP1_HVA22 PF03134.19 NODE_83178_length_191_cov_1.538462_g75237_i0reverse_frame_1 - 0.066 13.1 4.9 0.079 12.9 4.9 1.1 1 0 0 1 1 1 0 TB2/DP1, HVA22 family Syntaxin_2 PF14523.6 NODE_83178_length_191_cov_1.538462_g75237_i0forward_frame_1 - 0.003 17.9 2.1 0.0034 17.7 2.1 1.1 1 0 0 1 1 1 1 Syntaxin-like protein Fusion_gly PF00523.18 NODE_83178_length_191_cov_1.538462_g75237_i0forward_frame_1 - 0.051 11.8 0.8 0.059 11.6 0.8 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0 XPG_N PF00752.17 NODE_83177_length_191_cov_1.538462_g75236_i0reverse_frame_1 - 0.07 13.6 0.1 0.076 13.5 0.1 1.1 1 0 0 1 1 1 0 XPG N-terminal domain DUF3854 PF12965.7 NODE_83169_length_191_cov_1.583333_g75228_i0reverse_frame_1 - 0.083 12.9 0.0 0.093 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) zf-RanBP PF00641.18 NODE_83168_length_191_cov_1.596154_g75227_i0reverse_frame_1 - 0.052 12.9 1.4 0.074 12.4 1.4 1.2 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others DnaJ_CXXCXGXG PF00684.19 NODE_83159_length_191_cov_1.660256_g75218_i0reverse_frame_1 - 0.042 14.2 0.1 0.054 13.9 0.1 1.3 1 0 0 1 1 1 0 DnaJ central domain Ion_trans PF00520.31 NODE_83158_length_191_cov_1.660256_g75217_i0forward_frame_1 - 3.2e-11 42.9 0.2 3.3e-11 42.9 0.2 1.0 1 0 0 1 1 1 1 Ion transport protein DUF3112 PF11309.8 NODE_83152_length_191_cov_1.692308_g75211_i0reverse_frame_1 - 0.018 14.5 0.1 0.019 14.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3112) MFS_1 PF07690.16 NODE_83150_length_191_cov_1.711538_g75209_i0reverse_frame_1 - 0.00057 18.9 5.1 0.0006 18.8 5.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF4383 PF14325.6 NODE_83150_length_191_cov_1.711538_g75209_i0reverse_frame_1 - 0.032 14.5 0.8 0.036 14.3 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4383) O-ag_pol_Wzy PF14296.6 NODE_83144_length_191_cov_1.730769_g75203_i0reverse_frame_1 - 0.022 13.4 0.5 0.026 13.2 0.5 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy OSTbeta PF15048.6 NODE_83144_length_191_cov_1.730769_g75203_i0reverse_frame_1 - 0.04 14.0 0.4 0.042 14.0 0.4 1.1 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein EphA2_TM PF14575.6 NODE_83144_length_191_cov_1.730769_g75203_i0reverse_frame_1 - 0.05 14.5 0.0 0.06 14.2 0.0 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF2615 PF11027.8 NODE_83144_length_191_cov_1.730769_g75203_i0reverse_frame_1 - 0.056 13.6 0.3 0.062 13.4 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) DUF2205 PF10224.9 NODE_83135_length_191_cov_1.762821_g75194_i0forward_frame_1 - 0.077 13.0 0.2 0.1 12.6 0.2 1.2 1 0 0 1 1 1 0 Short coiled-coil protein DHC_N2 PF08393.13 NODE_83124_length_191_cov_1.820513_g75183_i0reverse_frame_1 - 1.1e-07 31.3 0.1 1.1e-07 31.3 0.1 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 HTH_Mga PF08280.11 NODE_83118_length_191_cov_1.923077_g75177_i0forward_frame_1 - 0.058 13.4 0.2 0.068 13.2 0.2 1.2 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain YbgT_YccB PF08173.11 NODE_83108_length_191_cov_1.967949_g75167_i0forward_frame_1 - 0.065 13.4 1.2 0.14 12.3 1.2 1.6 1 0 0 1 1 1 0 Membrane bound YbgT-like protein Pkinase_fungal PF17667.1 NODE_83106_length_191_cov_1.980769_g75165_i0reverse_frame_1 - 0.03 13.1 1.7 0.033 13.0 1.7 1.0 1 0 0 1 1 1 0 Fungal protein kinase RTBV_P46 PF06216.11 NODE_83094_length_191_cov_2.038462_g75153_i0reverse_frame_1 - 0.071 12.0 0.1 0.071 12.0 0.1 1.0 1 0 0 1 1 1 0 Rice tungro bacilliform virus P46 protein UPF0552 PF10574.9 NODE_83089_length_191_cov_2.044872_g75148_i0reverse_frame_1 - 0.11 11.8 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Arp2/3-interacting proteins Arpin Peptidase_M73 PF12389.8 NODE_83082_length_191_cov_2.051282_g75141_i0forward_frame_1 - 0.18 11.7 0.0 0.19 11.5 0.0 1.0 1 0 0 1 1 1 0 Camelysin metallo-endopeptidase DUF2688 PF10892.8 NODE_83078_length_191_cov_2.083333_g75137_i0reverse_frame_1 - 0.0022 17.4 0.3 0.0052 16.2 0.3 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2688) Peptidase_C2 PF00648.21 NODE_83063_length_191_cov_2.230769_g75122_i0forward_frame_1 - 1.4e-16 60.4 0.0 1.4e-16 60.4 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Glyco_hydro_4C PF11975.8 NODE_83058_length_191_cov_2.282051_g75117_i0forward_frame_1 - 0.00032 20.8 0.0 0.00035 20.7 0.0 1.0 1 0 0 1 1 1 1 Family 4 glycosyl hydrolase C-terminal domain TetR_C_4 PF08359.11 NODE_83057_length_191_cov_2.288462_g75116_i0reverse_frame_1 - 0.0022 18.1 0.0 0.0022 18.1 0.0 1.1 1 0 0 1 1 1 1 YsiA-like protein, C-terminal region DNA_RNApol_7kD PF03604.13 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 1.7e-05 24.4 4.1 2.7e-05 23.7 4.1 1.2 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit OrfB_Zn_ribbon PF07282.11 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.00034 20.5 0.3 0.00039 20.3 0.3 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain C1_1 PF00130.22 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.00046 20.0 3.0 0.0006 19.6 3.0 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-ribbon_3 PF13248.6 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.0069 15.7 1.5 0.2 11.1 0.1 2.3 2 0 0 2 2 2 1 zinc-ribbon domain Sgf11 PF08209.11 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.007 15.9 4.9 0.19 11.3 0.5 2.2 2 0 0 2 2 2 2 Sgf11 (transcriptional regulation protein) Prok-RING_1 PF14446.6 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.0086 16.0 2.1 0.012 15.6 2.1 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 DUF2318 PF10080.9 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.024 14.8 3.4 0.028 14.5 3.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) zf-C2H2_3 PF13878.6 NODE_83056_length_191_cov_2.288462_g75115_i0forward_frame_1 - 0.11 12.3 4.5 0.36 10.7 0.8 2.3 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO KASH PF10541.9 NODE_83050_length_191_cov_2.346154_g75109_i0reverse_frame_1 - 0.058 13.7 1.5 0.07 13.4 1.5 1.1 1 0 0 1 1 1 0 Nuclear envelope localisation domain zf-LYAR PF08790.11 NODE_83033_length_191_cov_2.596154_g75092_i0forward_frame_1 - 0.027 14.4 0.3 0.027 14.4 0.3 1.7 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger DUF2150 PF09920.9 NODE_83031_length_191_cov_2.692308_g75090_i0reverse_frame_1 - 0.099 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2150) Transposase_20 PF02371.16 NODE_83014_length_191_cov_3.038462_g75073_i0forward_frame_1 - 0.052 13.9 0.1 0.061 13.6 0.1 1.1 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family MORN PF02493.20 NODE_83011_length_191_cov_3.205128_g75070_i0forward_frame_1 - 2.2e-05 24.1 0.4 2.2e-05 24.1 0.4 2.2 3 0 0 3 3 3 1 MORN repeat Hfq PF17209.3 NODE_83005_length_191_cov_3.634615_g75064_i0forward_frame_1 - 3.9e-21 74.5 0.2 4.5e-21 74.3 0.2 1.1 1 0 0 1 1 1 1 Hfq protein LSM PF01423.22 NODE_83005_length_191_cov_3.634615_g75064_i0forward_frame_1 - 0.12 12.0 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 LSM domain Alpha_E1_glycop PF01589.16 NODE_82992_length_191_cov_16.506410_g75051_i0reverse_frame_1 - 0.08 11.6 0.0 0.08 11.6 0.0 1.0 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein DUF4560 PF15118.6 NODE_82988_length_191_cov_24.391026_g75047_i0reverse_frame_1 - 0.17 11.8 0.3 0.23 11.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4560) PH_4 PF15404.6 NODE_82982_length_191_cov_28.750000_g75041_i0forward_frame_1 - 0.069 12.9 0.1 0.075 12.8 0.1 1.0 1 0 0 1 1 1 0 Pleckstrin homology domain Pox_A21 PF05323.12 NODE_82975_length_191_cov_34.179487_g75034_i0reverse_frame_1 - 0.051 14.1 0.2 0.058 14.0 0.2 1.1 1 0 0 1 1 1 0 Poxvirus A21 Protein MDM10 PF12519.8 NODE_82974_length_191_cov_34.474359_g75033_i0reverse_frame_1 - 1.3 7.9 4.3 1.3 7.8 4.3 1.0 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 Toxin_2 PF00451.19 NODE_82971_length_191_cov_39.557692_g75030_i0reverse_frame_1 - 0.37 11.1 0.1 0.37 11.1 0.1 2.2 2 1 0 2 2 2 0 Scorpion short toxin, BmKK2 DUF3198 PF11433.8 NODE_82969_length_191_cov_40.480769_g75028_i0reverse_frame_1 - 0.049 13.5 0.2 0.077 12.9 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3198) SH2_2 PF14633.6 NODE_82969_length_191_cov_40.480769_g75028_i0reverse_frame_1 - 0.11 11.9 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 SH2 domain CfAFP PF05264.11 NODE_82965_length_191_cov_46.250000_g75024_i0reverse_frame_1 - 0.075 13.0 0.1 0.079 13.0 0.1 1.1 1 0 0 1 1 1 0 Choristoneura fumiferana antifreeze protein (CfAFP) EVC2_like PF12297.8 NODE_82962_length_191_cov_48.923077_g75021_i0reverse_frame_1 - 0.14 10.8 1.1 0.12 11.0 1.1 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein DUF5447 PF17525.2 NODE_82961_length_191_cov_52.698718_g75020_i0forward_frame_1 - 1.3 9.6 10.4 1.4 9.4 10.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5447) TRSP PF12500.8 NODE_82945_length_191_cov_72.967949_g75004_i0reverse_frame_1 - 0.21 11.5 0.0 0.26 11.2 0.0 1.1 1 0 0 1 1 1 0 TRSP domain C terminus to PRTase_2 DUF5101 PF17031.5 NODE_82944_length_191_cov_73.666667_g75003_i0forward_frame_1 - 0.084 13.0 0.1 0.09 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) BAP PF06639.11 NODE_82936_length_191_cov_90.166667_g74995_i0forward_frame_1 - 0.03 14.7 1.1 0.038 14.3 1.1 1.2 1 0 0 1 1 1 0 Basal layer antifungal peptide (BAP) HnRNP_M PF11532.8 NODE_82933_length_191_cov_104.717949_g74992_i0forward_frame_1 - 1 9.6 6.8 1.7 8.9 6.8 1.4 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein M DUF4834 PF16118.5 NODE_82930_length_191_cov_117.743590_g74989_i0reverse_frame_1 - 0.064 14.2 0.0 0.069 14.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) SLC3A2_N PF16028.5 NODE_82928_length_191_cov_125.615385_g74987_i0forward_frame_1 - 0.17 11.5 2.5 0.17 11.5 1.8 1.5 1 1 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Defensin_3 PF08131.11 NODE_82924_length_191_cov_143.429487_g74983_i0reverse_frame_1 - 0.027 14.7 0.3 0.027 14.7 0.3 2.0 1 1 1 2 2 2 0 Defensin-like peptide family Band_7_C PF16200.5 NODE_82917_length_191_cov_172.378205_g74976_i0reverse_frame_1 - 0.042 13.9 0.0 0.049 13.7 0.0 1.1 1 0 0 1 1 1 0 C-terminal region of band_7 SIR2 PF02146.17 NODE_82917_length_191_cov_172.378205_g74976_i0reverse_frame_1 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Sir2 family Osw5 PF17062.5 NODE_82911_length_191_cov_1313.448718_g74970_i0forward_frame_1 - 0.22 11.6 9.2 0.24 11.5 9.2 1.1 1 0 0 1 1 1 0 Outer spore wall 5 zf-HYPF PF07503.12 NODE_82910_length_191_cov_1880.762821_g74969_i0reverse_frame_1 - 0.11 12.3 1.0 0.44 10.3 0.2 2.1 2 0 0 2 2 2 0 HypF finger Babuvirus_MP PF07234.11 NODE_82910_length_191_cov_1880.762821_g74969_i0forward_frame_1 - 4 7.6 5.6 5 7.3 5.6 1.2 1 0 0 1 1 1 0 Movement and RNA silencing protein Peptidase_C2 PF00648.21 NODE_82904_length_192_cov_0.834395_g74963_i0reverse_frame_1 - 6.3e-10 38.6 0.0 6.5e-10 38.5 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease F-112 PF09645.10 NODE_82899_length_192_cov_0.917197_g74958_i0forward_frame_1 - 0.027 14.6 0.7 0.028 14.5 0.7 1.1 1 0 0 1 1 1 0 F-112 protein AlphaC_C PF17480.2 NODE_82897_length_192_cov_0.936306_g74956_i0reverse_frame_1 - 0.047 13.7 0.1 0.061 13.4 0.1 1.2 1 0 0 1 1 1 0 AlphaC C-terminal Lum_binding PF00677.17 NODE_82893_length_192_cov_0.968153_g74952_i0forward_frame_1 - 1.2e-05 25.2 0.7 0.00029 20.8 0.1 2.0 2 0 0 2 2 2 2 Lumazine binding domain DUF411 PF04214.13 NODE_82893_length_192_cov_0.968153_g74952_i0forward_frame_1 - 0.00079 19.3 0.0 0.001 19.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF Ion_trans PF00520.31 NODE_82886_length_192_cov_1.006369_g74945_i0forward_frame_1 - 0.00019 20.7 0.5 0.00022 20.5 0.5 1.0 1 0 0 1 1 1 1 Ion transport protein DUF222 PF02720.17 NODE_82878_length_192_cov_1.012739_g74937_i0forward_frame_1 - 0.079 12.4 0.0 0.091 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF222) zf-ANAPC11 PF12861.7 NODE_82874_length_192_cov_1.012739_g74933_i0reverse_frame_1 - 0.084 12.9 1.9 0.12 12.4 1.9 1.4 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Vint PF14623.6 NODE_82865_length_192_cov_1.012739_g74924_i0reverse_frame_1 - 0.11 12.3 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Hint-domain COX4_pro_2 PF07835.12 NODE_82864_length_192_cov_1.012739_g74923_i0forward_frame_1 - 0.084 13.0 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Bacterial aa3 type cytochrome c oxidase subunit IV DUF4051 PF13260.6 NODE_82851_length_192_cov_1.019108_g74910_i0forward_frame_1 - 4.2 7.2 7.9 6.4 6.6 7.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) NOA36 PF06524.12 NODE_82846_length_192_cov_1.019108_g74905_i0reverse_frame_1 - 0.16 11.3 0.0 0.16 11.2 0.0 1.0 1 0 0 1 1 1 0 NOA36 protein DUF2367 PF10164.9 NODE_82845_length_192_cov_1.019108_g74904_i0forward_frame_1 - 0.76 10.3 4.9 0.95 10.0 4.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) zf-UBR PF02207.20 NODE_82843_length_192_cov_1.019108_g74902_i0forward_frame_1 - 0.023 14.8 3.1 0.03 14.5 3.1 1.1 1 0 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) Bacteriocin_II PF01721.18 NODE_82841_length_192_cov_1.019108_g74900_i0reverse_frame_1 - 0.047 13.8 1.5 0.11 12.7 1.5 1.6 1 0 0 1 1 1 0 Class II bacteriocin Erv26 PF04148.13 NODE_82838_length_192_cov_1.019108_g74897_i0reverse_frame_1 - 0.12 12.2 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Transmembrane adaptor Erv26 UL21a PF17636.2 NODE_82835_length_192_cov_1.019108_g74894_i0reverse_frame_1 - 1.1 9.3 2.9 0.57 10.2 1.1 1.3 1 1 1 2 2 2 0 Viral Unique Long protein 21a zf-RING_6 PF14835.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 1.7e-05 24.6 6.7 1.7e-05 24.6 6.7 2.0 1 1 1 2 2 2 1 zf-RING of BARD1-type protein zf-RING_UBOX PF13445.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 2.3e-05 24.3 11.4 4.5e-05 23.4 11.4 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 3.1e-05 23.7 10.1 3.1e-05 23.7 10.1 2.1 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.00013 21.8 10.1 0.00013 21.8 10.1 1.7 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.00027 20.8 10.1 0.00027 20.8 10.1 2.1 2 1 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.0032 17.6 11.0 0.0032 17.6 11.0 1.9 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_1 - 0.013 15.8 10.9 0.013 15.8 10.9 2.1 2 0 0 2 2 2 0 Ring finger domain Nudix_N_2 PF14803.6 NODE_82827_length_192_cov_1.019108_g74886_i0reverse_frame_1 - 0.012 15.6 3.2 0.012 15.6 3.2 1.6 2 0 0 2 2 2 0 Nudix N-terminal Ribosomal_L24e PF01246.20 NODE_82820_length_192_cov_1.019108_g74879_i0reverse_frame_1 - 0.015 15.5 0.2 0.02 15.1 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein L24e CENP-P PF13096.6 NODE_82814_length_192_cov_1.038217_g74873_i0forward_frame_1 - 0.08 12.6 0.3 0.079 12.7 0.3 1.2 1 0 0 1 1 1 0 CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P DUF3848 PF12959.7 NODE_82801_length_192_cov_1.140127_g74860_i0reverse_frame_1 - 0.022 14.8 0.0 0.024 14.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3848) NMT PF01233.19 NODE_82800_length_192_cov_1.146497_g74859_i0forward_frame_1 - 0.096 12.5 0.1 0.11 12.4 0.1 1.0 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain PAC4 PF16093.5 NODE_82792_length_192_cov_1.171975_g74851_i0reverse_frame_1 - 0.087 13.0 0.0 0.087 13.0 0.0 1.1 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Sulfotransfer_3 PF13469.6 NODE_82792_length_192_cov_1.171975_g74851_i0reverse_frame_1 - 0.096 13.1 0.3 0.12 12.8 0.3 1.1 1 0 0 1 1 1 0 Sulfotransferase family Ac110_PIF PF07280.11 NODE_82790_length_192_cov_1.171975_g74849_i0forward_frame_1 - 1 9.2 6.1 0.26 11.1 2.2 1.8 2 0 0 2 2 2 0 Per os infectivity factor AC110 EPTP PF03736.17 NODE_82788_length_192_cov_1.191083_g74847_i0reverse_frame_1 - 0.083 12.9 0.3 0.13 12.3 0.3 1.5 1 1 0 1 1 1 0 EPTP domain DUF2142 PF09913.9 NODE_82787_length_192_cov_1.197452_g74846_i0reverse_frame_1 - 0.025 13.5 0.9 0.03 13.2 0.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) DUF1593 PF07632.11 NODE_82783_length_192_cov_1.248408_g74842_i0forward_frame_1 - 0.17 11.3 0.0 0.17 11.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1593) tRNA_anti-codon PF01336.25 NODE_82781_length_192_cov_1.267516_g74840_i0forward_frame_1 - 4.2e-13 49.1 0.0 4.8e-13 48.9 0.0 1.0 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF1294 PF06961.13 NODE_82780_length_192_cov_1.267516_g74839_i0forward_frame_1 - 0.76 10.1 2.1 5.7 7.3 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1294) SNAD2 PF18745.1 NODE_82776_length_192_cov_1.267516_g74835_i0forward_frame_1 - 0.00078 19.2 0.4 0.00083 19.1 0.4 1.0 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 2 Zwilch PF09817.9 NODE_82776_length_192_cov_1.267516_g74835_i0forward_frame_1 - 0.042 12.3 0.0 0.047 12.2 0.0 1.0 1 0 0 1 1 1 0 RZZ complex, subunit zwilch DUF3903 PF13043.6 NODE_82771_length_192_cov_1.273885_g74830_i0reverse_frame_1 - 0.15 11.8 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3903) Megourin PF17560.2 NODE_82769_length_192_cov_1.273885_g74828_i0forward_frame_1 - 0.039 14.2 1.1 0.039 14.2 1.1 1.2 1 0 0 1 1 1 0 Aphid Megourins TMEM40 PF15817.5 NODE_82759_length_192_cov_1.273885_g74818_i0forward_frame_1 - 0.19 11.5 1.5 0.2 11.4 1.5 1.1 1 0 0 1 1 1 0 Transmembrane protein 40 family Gln-synt_N PF03951.19 NODE_82752_length_192_cov_1.318471_g74811_i0reverse_frame_1 - 0.11 12.3 0.1 0.15 11.9 0.1 1.3 1 1 0 1 1 1 0 Glutamine synthetase, beta-Grasp domain AF-4 PF05110.13 NODE_82750_length_192_cov_1.324841_g74809_i0forward_frame_1 - 0.83 7.7 8.8 0.91 7.5 8.8 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein SMYLE_N PF18615.1 NODE_82747_length_192_cov_1.337580_g74806_i0reverse_frame_1 - 0.098 12.2 0.1 0.11 12.0 0.1 1.0 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain OB_MalK PF17912.1 NODE_82744_length_192_cov_1.343949_g74803_i0forward_frame_1 - 2.1e-05 25.3 0.1 3.9e-05 24.4 0.1 1.5 2 0 0 2 2 2 1 MalK OB fold domain TOBE_2 PF08402.10 NODE_82744_length_192_cov_1.343949_g74803_i0forward_frame_1 - 0.0002 21.4 0.0 0.00028 21.0 0.0 1.2 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 NODE_82744_length_192_cov_1.343949_g74803_i0forward_frame_1 - 0.013 16.1 0.0 0.019 15.5 0.0 1.3 1 0 0 1 1 1 0 CysA C-terminal regulatory domain Tat PF00539.18 NODE_82740_length_192_cov_1.363057_g74799_i0reverse_frame_1 - 1.3 9.2 7.1 0.1 12.7 1.9 1.9 2 1 1 3 3 3 0 Transactivating regulatory protein (Tat) IBV_3A PF03617.13 NODE_82739_length_192_cov_1.363057_g74798_i0forward_frame_1 - 0.059 13.4 0.0 0.079 13.0 0.0 1.2 1 0 0 1 1 1 0 IBV 3A protein Ycf70 PF17382.2 NODE_82731_length_192_cov_1.414013_g74790_i0forward_frame_1 - 1.1 9.7 3.0 1.1 9.7 3.0 1.3 1 0 0 1 1 1 0 Uncharacterized Ycf70-like Popeye PF04831.13 NODE_82731_length_192_cov_1.414013_g74790_i0forward_frame_1 - 3 8.0 11.6 3.1 8.0 11.6 1.1 1 0 0 1 1 1 0 Popeye protein conserved region Transposase_20 PF02371.16 NODE_82726_length_192_cov_1.433121_g74785_i0reverse_frame_1 - 0.05 13.9 0.0 0.057 13.7 0.0 1.1 1 0 0 1 1 1 0 Transposase IS116/IS110/IS902 family Rad50_zn_hook PF04423.14 NODE_82712_length_192_cov_1.490446_g74771_i0forward_frame_1 - 0.19 11.6 2.2 0.28 11.1 2.2 1.1 1 0 0 1 1 1 0 Rad50 zinc hook motif Ploopntkinase2 PF18747.1 NODE_82710_length_192_cov_1.490446_g74769_i0reverse_frame_1 - 0.11 11.7 0.2 0.11 11.8 0.2 1.0 1 0 0 1 1 1 0 P-loop Nucleotide Kinase2 CCAP PF11105.8 NODE_82709_length_192_cov_1.496815_g74768_i0reverse_frame_1 - 0.017 15.1 0.1 0.019 14.9 0.1 1.1 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a Comm PF15957.5 NODE_82709_length_192_cov_1.496815_g74768_i0reverse_frame_1 - 0.19 12.1 3.6 0.22 11.9 3.6 1.1 1 0 0 1 1 1 0 Commissureless G-alpha PF00503.20 NODE_82709_length_192_cov_1.496815_g74768_i0reverse_frame_1 - 0.25 10.5 0.2 0.29 10.3 0.2 1.0 1 0 0 1 1 1 0 G-protein alpha subunit DUF155 PF02582.14 NODE_82704_length_192_cov_1.509554_g74763_i0reverse_frame_1 - 0.046 13.8 0.4 1 9.5 0.0 2.0 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Equine_IAV_S2 PF06502.11 NODE_82704_length_192_cov_1.509554_g74763_i0reverse_frame_1 - 0.72 10.0 3.6 15 5.8 0.4 2.0 1 1 1 2 2 2 0 Equine infectious anaemia virus S2 protein UvrD_C_2 PF13538.6 NODE_82691_length_192_cov_1.528662_g74750_i0reverse_frame_1 - 0.0014 18.4 0.0 0.0017 18.1 0.0 1.3 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C PF13361.6 NODE_82691_length_192_cov_1.528662_g74750_i0reverse_frame_1 - 0.014 14.8 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain C1_2 PF03107.16 NODE_82687_length_192_cov_1.528662_g74746_i0forward_frame_1 - 0.0097 16.2 1.0 0.013 15.8 1.0 1.2 1 0 0 1 1 1 1 C1 domain ShK PF01549.24 NODE_82686_length_192_cov_1.528662_g74745_i0reverse_frame_1 - 0.066 13.8 5.2 5.4 7.6 2.2 2.5 1 1 1 2 2 2 0 ShK domain-like F-box PF00646.33 NODE_82684_length_192_cov_1.528662_g74743_i0reverse_frame_1 - 0.076 12.9 4.5 0.12 12.3 4.5 1.3 1 0 0 1 1 1 0 F-box domain Serglycin PF04360.12 NODE_82682_length_192_cov_1.528662_g74741_i0forward_frame_1 - 0.2 11.6 0.5 0.21 11.6 0.5 1.2 1 0 0 1 1 1 0 Serglycin K_channel_TID PF07941.11 NODE_82682_length_192_cov_1.528662_g74741_i0forward_frame_1 - 0.92 10.0 8.3 1.2 9.6 8.3 1.1 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain Androgen_recep PF02166.16 NODE_82682_length_192_cov_1.528662_g74741_i0forward_frame_1 - 2.1 7.1 5.5 2.2 7.1 5.5 1.0 1 0 0 1 1 1 0 Androgen receptor DUF4303 PF14136.6 NODE_82667_length_192_cov_1.592357_g74726_i0forward_frame_1 - 0.1 12.3 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) ScsC_N PF18312.1 NODE_82663_length_192_cov_1.605096_g74722_i0forward_frame_1 - 0.26 11.2 0.8 0.39 10.6 0.8 1.2 1 0 0 1 1 1 0 Copper resistance protein ScsC N-terminal domain DUF4637 PF15470.6 NODE_82655_length_192_cov_1.624204_g74714_i0reverse_frame_1 - 0.014 15.1 0.9 0.017 14.9 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Atrophin-1 PF03154.15 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_1 - 0.02 13.2 3.2 0.019 13.3 3.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks424.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks424.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks424.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks424.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SOCS_box PF07525.16 NODE_82642_length_192_cov_1.707006_g74701_i0reverse_frame_1 - 0.0086 16.4 0.0 0.013 15.8 0.0 1.4 1 0 0 1 1 1 1 SOCS box Citrus_P18 PF05520.11 NODE_82631_length_192_cov_1.770701_g74690_i0forward_frame_1 - 0.0053 16.5 0.1 0.0058 16.4 0.1 1.1 1 0 0 1 1 1 1 Citrus tristeza virus P18 protein Sgf11_N PF18519.1 NODE_82627_length_192_cov_1.777070_g74686_i0forward_frame_1 - 0.1 12.2 0.4 0.15 11.6 0.4 1.2 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain Cullin_Nedd8 PF10557.9 NODE_82625_length_192_cov_1.783439_g74684_i0forward_frame_1 - 0.12 12.5 0.5 0.12 12.5 0.5 1.5 2 0 0 2 2 2 0 Cullin protein neddylation domain S-AdoMet_synt_N PF00438.20 NODE_82621_length_192_cov_1.815287_g74680_i0forward_frame_1 - 2.3e-25 89.1 0.2 2.5e-25 89.0 0.2 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain CD45 PF12567.8 NODE_82619_length_192_cov_1.828025_g74678_i0reverse_frame_1 - 0.037 14.0 6.6 0.05 13.6 6.6 1.2 1 0 0 1 1 1 0 Leukocyte receptor CD45 Pkr1 PF08636.10 NODE_82617_length_192_cov_1.840764_g74676_i0reverse_frame_1 - 0.47 10.6 4.7 1 9.5 0.5 2.0 1 1 1 2 2 2 0 ER protein Pkr1 SHMT PF00464.19 NODE_82616_length_192_cov_1.840764_g74675_i0forward_frame_1 - 3.3e-19 68.8 0.0 3.4e-19 68.7 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase SART-1 PF03343.13 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_1 - 0.036 12.6 1.5 0.032 12.8 1.5 1.0 1 0 0 1 1 1 0 SART-1 family ERbeta_N PF12497.8 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_1 - 0.11 12.3 0.1 0.11 12.2 0.1 1.1 1 0 0 1 1 1 0 Estrogen receptor beta Rubella_Capsid PF05750.11 NODE_82603_length_192_cov_1.980892_g74662_i0forward_frame_1 - 0.1 12.2 0.1 0.11 12.1 0.1 1.0 1 0 0 1 1 1 0 Rubella capsid protein Nitr_red_alph_N PF14710.6 NODE_82596_length_192_cov_2.006369_g74655_i0reverse_frame_1 - 0.18 12.3 3.1 3.2 8.3 3.1 2.1 1 1 0 1 1 1 0 Respiratory nitrate reductase alpha N-terminal PCDO_beta_N PF12391.8 NODE_82595_length_192_cov_2.012739_g74654_i0forward_frame_1 - 0.062 12.9 0.0 0.082 12.5 0.0 1.2 1 0 0 1 1 1 0 Protocatechuate 3,4-dioxygenase beta subunit N terminal CFC PF09443.10 NODE_82594_length_192_cov_2.012739_g74653_i0reverse_frame_1 - 0.37 10.7 5.5 0.29 11.0 3.1 2.1 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) RIH_assoc PF08454.11 NODE_82594_length_192_cov_2.012739_g74653_i0forward_frame_1 - 0.058 13.3 0.3 0.061 13.2 0.3 1.1 1 0 0 1 1 1 0 RyR and IP3R Homology associated Lsr2 PF11774.8 NODE_82594_length_192_cov_2.012739_g74653_i0forward_frame_1 - 0.24 11.5 0.0 0.26 11.4 0.0 1.1 1 0 0 1 1 1 0 Lsr2 Acp26Ab PF05777.12 NODE_82587_length_192_cov_2.050955_g74646_i0reverse_frame_1 - 0.13 12.9 4.3 0.15 12.7 4.3 1.1 1 0 0 1 1 1 0 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) PRANC PF09372.10 NODE_82587_length_192_cov_2.050955_g74646_i0forward_frame_1 - 0.11 12.8 0.4 0.11 12.8 0.4 1.0 1 0 0 1 1 1 0 PRANC domain IQ PF00612.27 NODE_82586_length_192_cov_2.057325_g74645_i0forward_frame_1 - 8.2e-06 25.2 0.2 8.2e-06 25.2 0.2 1.8 2 0 0 2 2 2 1 IQ calmodulin-binding motif PFOR_II PF17147.4 NODE_82582_length_192_cov_2.101911_g74641_i0forward_frame_1 - 0.011 16.0 0.0 0.012 15.8 0.0 1.0 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II DUF2817 PF10994.8 NODE_82582_length_192_cov_2.101911_g74641_i0forward_frame_1 - 0.11 11.8 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2817) DUF1440 PF07274.12 NODE_82580_length_192_cov_2.121019_g74639_i0forward_frame_1 - 0.052 13.9 0.1 0.058 13.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1440) RelB PF04221.12 NODE_82579_length_192_cov_2.121019_g74638_i0reverse_frame_1 - 0.028 14.4 0.4 0.036 14.0 0.4 1.2 1 0 0 1 1 1 0 RelB antitoxin Thionin PF00321.17 NODE_82577_length_192_cov_2.222930_g74636_i0reverse_frame_1 - 0.0042 17.5 0.2 0.0058 17.1 0.2 1.2 1 0 0 1 1 1 1 Plant thionin DUF5371 PF17341.2 NODE_82577_length_192_cov_2.222930_g74636_i0reverse_frame_1 - 0.077 13.2 0.3 6.7 7.0 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5371) DUF4694 PF15765.5 NODE_82577_length_192_cov_2.222930_g74636_i0forward_frame_1 - 0.11 12.5 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) Rab_eff_C PF04698.12 NODE_82574_length_192_cov_2.242038_g74633_i0reverse_frame_1 - 0.095 11.0 0.1 0.11 10.8 0.1 1.0 1 0 0 1 1 1 0 Rab effector MyRIP/melanophilin C-terminus TetR_C_5 PF08360.11 NODE_82571_length_192_cov_2.267516_g74630_i0forward_frame_1 - 0.088 13.0 0.0 0.094 12.9 0.0 1.1 1 0 0 1 1 1 0 QacR-like protein, C-terminal region HigB-like_toxin PF05015.13 NODE_82569_length_192_cov_2.280255_g74628_i0reverse_frame_1 - 0.11 13.0 0.1 0.12 12.8 0.1 1.1 1 0 0 1 1 1 0 RelE-like toxin of type II toxin-antitoxin system HigB zf-C4_Topoisom PF01396.19 NODE_82558_length_192_cov_2.439490_g74617_i0forward_frame_1 - 1.1e-07 31.4 1.2 1.9e-07 30.7 1.2 1.4 1 1 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger Zn_ribbon_recom PF13408.6 NODE_82558_length_192_cov_2.439490_g74617_i0forward_frame_1 - 0.0044 17.5 0.0 0.0052 17.3 0.0 1.1 1 0 0 1 1 1 1 Recombinase zinc beta ribbon domain GSG-1 PF07803.11 NODE_82558_length_192_cov_2.439490_g74617_i0forward_frame_1 - 0.048 13.6 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 GSG1-like protein Cnl2_NKP2 PF09447.10 NODE_82556_length_192_cov_2.458599_g74615_i0reverse_frame_1 - 0.097 12.8 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Cnl2/NKP2 family protein YqhR PF11085.8 NODE_82554_length_192_cov_2.496815_g74613_i0reverse_frame_1 - 0.1 12.5 0.4 0.098 12.6 0.4 1.1 1 0 0 1 1 1 0 Conserved membrane protein YqhR TT_ORF2a PF08197.11 NODE_82548_length_192_cov_2.656051_g74607_i0reverse_frame_1 - 0.014 15.4 0.2 0.022 14.8 0.2 1.3 1 0 0 1 1 1 0 pORF2a truncated protein zf-ribbon_3 PF13248.6 NODE_82546_length_192_cov_2.675159_g74605_i0forward_frame_1 - 0.031 13.7 0.2 0.057 12.8 0.2 1.4 1 0 0 1 1 1 0 zinc-ribbon domain GAGA PF09237.11 NODE_82546_length_192_cov_2.675159_g74605_i0forward_frame_1 - 0.069 13.0 1.2 0.069 13.0 0.1 1.5 2 0 0 2 2 2 0 GAGA factor TF_Zn_Ribbon PF08271.12 NODE_82546_length_192_cov_2.675159_g74605_i0forward_frame_1 - 0.079 12.5 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding TMEM174 PF15029.6 NODE_82536_length_192_cov_2.993631_g74595_i0reverse_frame_1 - 0.033 13.9 0.0 0.037 13.7 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 174 NMU PF02070.15 NODE_82534_length_192_cov_3.012739_g74593_i0reverse_frame_1 - 0.19 11.6 0.3 0.19 11.6 0.3 2.1 2 0 0 2 2 2 0 Neuromedin U DUF1580 PF07618.11 NODE_82532_length_192_cov_3.095541_g74591_i0forward_frame_1 - 0.46 10.1 5.6 0.74 9.5 5.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1580) Glyco_trans_4_3 PF12000.8 NODE_82528_length_192_cov_3.662420_g74587_i0reverse_frame_1 - 0.088 12.5 0.1 0.088 12.5 0.1 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 4 group MSC PF09402.10 NODE_82527_length_192_cov_3.796178_g74586_i0forward_frame_1 - 2.3 7.6 4.7 2.2 7.6 4.7 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain Ada_Zn_binding PF02805.16 NODE_82525_length_192_cov_4.089172_g74584_i0reverse_frame_1 - 1.2e-05 25.2 0.8 1.9e-05 24.6 0.8 1.3 1 0 0 1 1 1 1 Metal binding domain of Ada zf_Rg PF17915.1 NODE_82525_length_192_cov_4.089172_g74584_i0reverse_frame_1 - 0.13 11.7 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Reverse gyrase zinc finger DUF1660 PF07874.11 NODE_82525_length_192_cov_4.089172_g74584_i0reverse_frame_1 - 0.16 12.5 0.0 0.2 12.2 0.0 1.2 1 0 0 1 1 1 0 Prophage protein (DUF1660) DUF929 PF06053.11 NODE_82521_length_192_cov_5.458599_g74580_i0reverse_frame_1 - 0.03 13.6 0.3 0.031 13.6 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF929) ABC2_membrane_3 PF12698.7 NODE_82512_length_192_cov_20.732484_g74571_i0forward_frame_1 - 0.12 11.5 1.7 0.13 11.4 1.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Cullin_Nedd8 PF10557.9 NODE_82510_length_192_cov_23.630573_g74569_i0reverse_frame_1 - 0.016 15.2 0.9 0.022 14.8 0.9 1.3 1 0 0 1 1 1 0 Cullin protein neddylation domain Archaeal_AmoA PF12942.7 NODE_82510_length_192_cov_23.630573_g74569_i0forward_frame_1 - 0.058 13.1 0.7 0.066 12.9 0.7 1.0 1 0 0 1 1 1 0 Archaeal ammonia monooxygenase subunit A (AmoA) PMD PF10536.9 NODE_82508_length_192_cov_24.840764_g74567_i0reverse_frame_1 - 0.1 11.7 0.0 0.1 11.7 0.0 1.0 1 0 0 1 1 1 0 Plant mobile domain Cys_rich_VLP PF14194.6 NODE_82507_length_192_cov_25.541401_g74566_i0reverse_frame_1 - 0.03 14.4 0.1 0.035 14.2 0.1 1.2 1 0 0 1 1 1 0 Cysteine-rich VLP HTH_ParB PF17762.1 NODE_82495_length_192_cov_33.528662_g74554_i0reverse_frame_1 - 0.094 12.5 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 HTH domain found in ParB protein E6 PF00518.17 NODE_82482_length_192_cov_40.968153_g74541_i0forward_frame_1 - 0.0036 17.7 1.7 0.0041 17.5 1.7 1.0 1 0 0 1 1 1 1 Early Protein (E6) TRAP-gamma PF07074.12 NODE_82475_length_192_cov_46.936306_g74534_i0reverse_frame_1 - 0.33 10.5 1.1 0.38 10.3 1.1 1.1 1 0 0 1 1 1 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DNA_meth_N PF18284.1 NODE_82474_length_192_cov_46.961783_g74533_i0forward_frame_1 - 0.02 14.8 0.3 0.037 13.9 0.1 1.5 1 1 0 1 1 1 0 DNA methylase N-terminal domain DUF5359 PF17313.2 NODE_82472_length_192_cov_48.210191_g74531_i0forward_frame_1 - 0.072 13.1 2.5 0.1 12.6 2.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5359) DUF2162 PF09930.9 NODE_82471_length_192_cov_48.350318_g74530_i0forward_frame_1 - 0.022 14.2 0.0 0.023 14.1 0.0 1.0 1 0 0 1 1 1 0 Predicted transporter (DUF2162) Reovirus_cap PF00979.17 NODE_82464_length_192_cov_55.343949_g74523_i0reverse_frame_1 - 0.1 11.7 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Reovirus outer capsid protein, Sigma 3 Pox_E6 PF04656.12 NODE_82462_length_192_cov_55.624204_g74521_i0reverse_frame_1 - 0.26 9.7 2.1 0.28 9.6 2.1 1.0 1 0 0 1 1 1 0 Pox virus E6 protein Amino_oxidase PF01593.24 NODE_82458_length_192_cov_74.127389_g74517_i0forward_frame_1 - 8.3e-07 28.6 0.1 8.3e-07 28.6 0.1 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Augurin PF15187.6 NODE_82456_length_192_cov_77.700637_g74515_i0reverse_frame_1 - 0.11 12.7 1.4 0.12 12.6 1.4 1.1 1 0 0 1 1 1 0 Oesophageal cancer-related gene 4 DUF2630 PF10944.8 NODE_82446_length_192_cov_101.248408_g74505_i0reverse_frame_1 - 0.2 12.1 0.1 0.28 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) Dimerisation PF08100.11 NODE_82446_length_192_cov_101.248408_g74505_i0forward_frame_1 - 0.067 13.2 1.1 0.083 12.9 0.3 1.6 2 0 0 2 2 2 0 Dimerisation domain DUF3510 PF12022.8 NODE_82446_length_192_cov_101.248408_g74505_i0forward_frame_1 - 0.12 12.7 0.1 0.17 12.3 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3510) zf-RING_13 PF17977.1 NODE_82443_length_192_cov_126.968153_g74502_i0reverse_frame_1 - 0.17 12.1 1.9 0.25 11.5 1.9 1.4 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain YMF19 PF02326.15 NODE_82441_length_192_cov_142.235669_g74500_i0reverse_frame_1 - 0.66 10.8 9.9 0.71 10.7 9.9 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 MHCassoc_trimer PF08831.10 NODE_82440_length_192_cov_184.445860_g74499_i0reverse_frame_1 - 0.005 16.8 2.2 0.075 13.0 0.3 2.0 1 1 1 2 2 2 2 Class II MHC-associated invariant chain trimerisation domain zinc_ribbon_12 PF11331.8 NODE_82435_length_192_cov_908.127389_g74494_i0forward_frame_1 - 1.2 9.0 4.0 11 5.9 0.0 2.2 1 1 1 2 2 2 0 Probable zinc-ribbon domain Adeno_E3A PF05248.12 NODE_82432_length_193_cov_0.797468_g74491_i0reverse_frame_3 - 0.0072 16.3 0.1 0.0084 16.1 0.1 1.0 1 0 0 1 1 1 1 Adenovirus E3A RVT_N PF13655.6 NODE_82432_length_193_cov_0.797468_g74491_i0forward_frame_3 - 0.12 12.6 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of reverse transcriptase WD40 PF00400.32 NODE_82430_length_193_cov_0.835443_g74489_i0forward_frame_3 - 4.7e-06 27.2 0.2 4.7e-06 27.2 0.2 2.4 3 0 0 3 3 3 1 WD domain, G-beta repeat SAP25 PF15476.6 NODE_82428_length_193_cov_0.867089_g74487_i0forward_frame_3 - 0.0029 17.3 0.1 0.0033 17.1 0.1 1.0 1 0 0 1 1 1 1 Histone deacetylase complex subunit SAP25 Co_AT_N PF12557.8 NODE_82423_length_193_cov_0.949367_g74482_i0forward_frame_3 - 0.12 12.3 3.6 0.17 11.9 3.6 1.2 1 0 0 1 1 1 0 Cob(I)alamin adenosyltransferase N terminal PTS_2-RNA PF01885.16 NODE_82422_length_193_cov_0.955696_g74481_i0reverse_frame_3 - 4.4e-05 23.6 0.0 5e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family VPDSG-CTERM PF18205.1 NODE_82419_length_193_cov_0.987342_g74478_i0forward_frame_3 - 0.17 11.7 1.7 1.1 9.2 0.6 2.2 2 0 0 2 2 2 0 VPDSG-CTERM motif GlnE PF03710.15 NODE_82419_length_193_cov_0.987342_g74478_i0forward_frame_2 - 0.22 10.9 0.0 0.23 10.8 0.0 1.0 1 0 0 1 1 1 0 Glutamate-ammonia ligase adenylyltransferase bact-PGI_C PF10432.9 NODE_82414_length_193_cov_0.993671_g74473_i0forward_frame_2 - 0.081 13.0 0.0 0.081 13.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial phospho-glucose isomerase C-terminal SIS domain TP53IP5 PF15331.6 NODE_82413_length_193_cov_0.993671_g74472_i0reverse_frame_2 - 0.18 11.9 3.7 0.19 11.8 3.7 1.1 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 NOC3p PF07540.11 NODE_82412_length_193_cov_0.993671_g74471_i0reverse_frame_2 - 0.077 13.5 0.1 0.085 13.3 0.1 1.1 1 0 0 1 1 1 0 Nucleolar complex-associated protein PsbN PF02468.15 NODE_82412_length_193_cov_0.993671_g74471_i0forward_frame_2 - 7.5 6.5 7.3 13 5.7 0.1 2.8 2 1 1 3 3 3 0 Photosystem II reaction centre N protein (psbN) DUF1402 PF07182.11 NODE_82411_length_193_cov_0.993671_g74470_i0reverse_frame_2 - 0.11 11.5 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1402) DUF3040 PF11239.8 NODE_82410_length_193_cov_1.000000_g74469_i0forward_frame_3 - 0.024 14.9 0.0 0.027 14.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) Secretin_N_2 PF07655.13 NODE_82403_length_193_cov_1.006329_g74462_i0reverse_frame_3 - 6.6 7.4 19.5 7.3 7.2 19.5 1.1 1 0 0 1 1 1 0 Secretin N-terminal domain Mucin PF01456.17 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_3 - 0.3 11.1 15.1 0.31 11.0 15.1 1.0 1 0 0 1 1 1 0 Mucin-like glycoprotein 7TM_GPCR_Srv PF10323.9 NODE_82403_length_193_cov_1.006329_g74462_i0forward_frame_2 - 4.8 6.4 20.2 5.8 6.2 20.2 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srv Gag_p12 PF01141.18 NODE_82402_length_193_cov_1.006329_g74461_i0reverse_frame_3 - 0.09 13.1 0.1 0.096 13.0 0.1 1.1 1 0 0 1 1 1 0 Gag polyprotein, inner coat protein p12 GP79 PF17463.2 NODE_82401_length_193_cov_1.006329_g74460_i0reverse_frame_2 - 0.12 12.4 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Gene product 79 Disintegrin PF00200.23 NODE_82399_length_193_cov_1.006329_g74458_i0reverse_frame_2 - 0.031 15.1 2.3 0.034 14.9 2.3 1.1 1 0 0 1 1 1 0 Disintegrin Cyt-b5 PF00173.28 NODE_82397_length_193_cov_1.006329_g74456_i0reverse_frame_3 - 0.018 15.2 0.0 0.025 14.7 0.0 1.3 1 0 0 1 1 1 0 Cytochrome b5-like Heme/Steroid binding domain MFA1_2 PF17317.2 NODE_82395_length_193_cov_1.006329_g74454_i0forward_frame_3 - 0.27 11.1 3.1 0.62 9.9 0.5 2.6 3 0 0 3 3 3 0 Mating hormone A-factor 1&2 TMEM95 PF15203.6 NODE_82389_length_193_cov_1.012658_g74448_i0forward_frame_3 - 0.066 12.9 1.9 0.068 12.8 1.9 1.1 1 0 0 1 1 1 0 TMEM95 family Bd3614_N PF14442.6 NODE_82386_length_193_cov_1.012658_g74445_i0reverse_frame_3 - 0.17 12.2 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 Bd3614-like deaminase N-terminal COOH-NH2_lig PF14395.6 NODE_82384_length_193_cov_1.012658_g74443_i0forward_frame_2 - 0.11 11.7 0.5 0.11 11.7 0.5 1.0 1 0 0 1 1 1 0 Phage phiEco32-like COOH.NH2 ligase-type 2 Cir_N PF10197.9 NODE_82384_length_193_cov_1.012658_g74443_i0forward_frame_2 - 0.72 10.1 3.7 11 6.2 0.1 2.2 2 0 0 2 2 2 0 N-terminal domain of CBF1 interacting co-repressor CIR DUF3763 PF12592.8 NODE_82376_length_193_cov_1.012658_g74435_i0forward_frame_2 - 0.074 13.1 0.3 0.11 12.5 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3763) T_cell_tran_alt PF15128.6 NODE_82373_length_193_cov_1.012658_g74432_i0reverse_frame_3 - 0.065 13.1 0.6 0.075 12.8 0.6 1.1 1 0 0 1 1 1 0 T-cell leukemia translocation-altered DUF4164 PF13747.6 NODE_82373_length_193_cov_1.012658_g74432_i0forward_frame_2 - 0.1 12.9 2.9 0.12 12.6 2.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) LAX PF15681.5 NODE_82368_length_193_cov_1.012658_g74427_i0forward_frame_3 - 0.049 12.5 0.1 0.054 12.3 0.1 1.0 1 0 0 1 1 1 0 Lymphocyte activation family X Acetyltransf_15 PF17013.5 NODE_82367_length_193_cov_1.012658_g74426_i0reverse_frame_3 - 0.013 15.0 2.6 0.014 14.8 2.6 1.0 1 0 0 1 1 1 0 Putative acetyl-transferase DUF4187 PF13821.6 NODE_82367_length_193_cov_1.012658_g74426_i0reverse_frame_2 - 0.023 14.5 1.2 0.023 14.5 1.2 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4187) RelE PF06296.12 NODE_82366_length_193_cov_1.012658_g74425_i0forward_frame_2 - 0.14 12.3 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 RelE toxin of RelE / RelB toxin-antitoxin system FR47 PF08445.10 NODE_82365_length_193_cov_1.012658_g74424_i0forward_frame_3 - 0.12 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 FR47-like protein DUF2477 PF10631.9 NODE_82365_length_193_cov_1.012658_g74424_i0forward_frame_2 - 0.14 12.8 9.0 0.2 12.3 9.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2477) His_Phos_2 PF00328.22 NODE_82362_length_193_cov_1.012658_g74421_i0reverse_frame_2 - 0.048 13.0 0.1 0.05 13.0 0.1 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) HIPIP PF01355.17 NODE_82361_length_193_cov_1.012658_g74420_i0reverse_frame_3 - 0.00073 19.8 0.9 0.00092 19.5 0.9 1.1 1 0 0 1 1 1 1 High potential iron-sulfur protein UNC119_bdg PF15435.6 NODE_82354_length_193_cov_1.050633_g74413_i0reverse_frame_3 - 0.092 12.3 1.5 0.096 12.2 1.5 1.0 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue DUF4253 PF14062.6 NODE_82352_length_193_cov_1.069620_g74411_i0reverse_frame_3 - 0.11 12.6 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) IL7 PF01415.16 NODE_82352_length_193_cov_1.069620_g74411_i0reverse_frame_2 - 0.033 14.2 0.2 0.035 14.1 0.2 1.1 1 0 0 1 1 1 0 Interleukin 7/9 family Sugar_tr PF00083.24 NODE_82351_length_193_cov_1.069620_g74410_i0forward_frame_2 - 0.006 15.5 6.4 0.0069 15.3 6.4 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_82351_length_193_cov_1.069620_g74410_i0forward_frame_2 - 0.044 12.7 3.5 0.049 12.5 3.5 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily Pex24p PF06398.11 NODE_82351_length_193_cov_1.069620_g74410_i0forward_frame_2 - 1.4 7.8 5.3 1.4 7.8 5.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin VATC PF18716.1 NODE_82350_length_193_cov_1.069620_g74409_i0reverse_frame_3 - 0.036 13.9 0.3 0.081 12.8 0.1 1.7 2 0 0 2 2 2 0 Vms1-associating treble clef domain DUF4131 PF13567.6 NODE_82349_length_193_cov_1.075949_g74408_i0reverse_frame_3 - 2.1 8.0 6.7 2.4 7.8 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Fusion_gly PF00523.18 NODE_82349_length_193_cov_1.075949_g74408_i0forward_frame_2 - 6.2 5.0 9.4 6.7 4.8 9.4 1.1 1 0 0 1 1 1 0 Fusion glycoprotein F0 DUF5346 PF17281.2 NODE_82348_length_193_cov_1.075949_g74407_i0reverse_frame_2 - 0.012 15.6 0.9 0.013 15.5 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5346) RBD PF02196.15 NODE_82344_length_193_cov_1.101266_g74403_i0reverse_frame_2 - 0.19 11.8 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Raf-like Ras-binding domain TMEM171 PF15471.6 NODE_82339_length_193_cov_1.151899_g74398_i0reverse_frame_3 - 1.8 7.5 3.3 1.9 7.4 3.3 1.0 1 0 0 1 1 1 0 Transmembrane protein family 171 SR-25 PF10500.9 NODE_82339_length_193_cov_1.151899_g74398_i0reverse_frame_2 - 1.3 8.5 6.7 1.6 8.3 6.7 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CAP_N PF01213.19 NODE_82339_length_193_cov_1.151899_g74398_i0reverse_frame_2 - 7.5 5.9 6.7 8.1 5.8 6.7 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Phlebovirus_G1 PF07243.11 NODE_82337_length_193_cov_1.177215_g74396_i0reverse_frame_3 - 0.47 8.8 2.0 0.53 8.6 2.0 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 DUF4513 PF14983.6 NODE_82334_length_193_cov_1.183544_g74393_i0forward_frame_2 - 0.1 12.7 0.0 0.1 12.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4513) BfiI_DBD PF18243.1 NODE_82327_length_193_cov_1.196203_g74386_i0reverse_frame_3 - 0.12 11.9 0.3 0.13 11.9 0.3 1.0 1 0 0 1 1 1 0 Metal-independent restriction enzyme BfiI DNA binding domain Avian_gp85 PF03708.14 NODE_82326_length_193_cov_1.196203_g74385_i0forward_frame_2 - 0.055 12.7 0.0 0.066 12.4 0.0 1.0 1 0 0 1 1 1 0 Avian retrovirus envelope protein, gp85 Ibs_toxin PF13956.6 NODE_82326_length_193_cov_1.196203_g74385_i0forward_frame_2 - 5.9 7.0 17.3 0.55 10.3 2.6 3.4 3 0 0 3 3 3 0 Toxin Ibs, type I toxin-antitoxin system XdhC_CoxI PF02625.16 NODE_82325_length_193_cov_1.202532_g74384_i0forward_frame_2 - 0.027 14.7 0.2 0.03 14.5 0.2 1.3 1 0 0 1 1 1 0 XdhC and CoxI family Erg28 PF03694.13 NODE_82324_length_193_cov_1.202532_g74383_i0forward_frame_3 - 0.063 13.7 0.0 0.069 13.5 0.0 1.0 1 0 0 1 1 1 0 Erg28 like protein Hum_adeno_E3A PF05393.11 NODE_82323_length_193_cov_1.208861_g74382_i0forward_frame_2 - 0.2 11.6 0.3 0.47 10.5 0.2 1.6 1 1 1 2 2 2 0 Human adenovirus early E3A glycoprotein DUF4771 PF15995.5 NODE_82322_length_193_cov_1.215190_g74381_i0forward_frame_3 - 0.073 13.3 0.7 0.078 13.2 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4771) SPR1 PF15356.6 NODE_82320_length_193_cov_1.221519_g74379_i0reverse_frame_3 - 0.038 14.5 0.1 0.041 14.4 0.1 1.0 1 0 0 1 1 1 0 Psoriasis susceptibility locus 2 DUF416 PF04222.12 NODE_82319_length_193_cov_1.221519_g74378_i0reverse_frame_3 - 0.15 11.5 0.4 0.16 11.4 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF416) Dimer_Tnp_hAT PF05699.14 NODE_82318_length_193_cov_1.227848_g74377_i0forward_frame_3 - 0.023 14.5 0.2 0.03 14.1 0.2 1.1 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region Par3_HAL_N_term PF12053.8 NODE_82316_length_193_cov_1.253165_g74375_i0forward_frame_3 - 0.18 12.0 0.0 0.21 11.8 0.0 1.1 1 0 0 1 1 1 0 N-terminal of Par3 and HAL proteins Ribosomal_S18 PF01084.20 NODE_82312_length_193_cov_1.259494_g74371_i0forward_frame_3 - 0.025 14.8 0.1 0.038 14.2 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S18 Nairovirus_M PF07948.11 NODE_82310_length_193_cov_1.259494_g74369_i0reverse_frame_3 - 0.0013 17.1 0.6 0.0014 16.9 0.6 1.0 1 0 0 1 1 1 1 Nairovirus M polyprotein-like DUF4788 PF16032.5 NODE_82310_length_193_cov_1.259494_g74369_i0reverse_frame_3 - 0.036 13.0 1.0 0.041 12.8 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4788) DUF4215 PF13948.6 NODE_82310_length_193_cov_1.259494_g74369_i0reverse_frame_2 - 0.0023 18.3 15.0 0.013 15.9 4.7 2.6 2 1 1 3 3 3 2 Domain of unknown function (DUF4215) Laminin_EGF PF00053.24 NODE_82310_length_193_cov_1.259494_g74369_i0reverse_frame_2 - 1.3 9.2 12.4 2.7 8.2 12.4 1.6 1 1 0 1 1 1 0 Laminin EGF domain FhuF_C PF11575.8 NODE_82310_length_193_cov_1.259494_g74369_i0reverse_frame_2 - 7.8 6.5 8.9 0.34 10.9 1.3 2.4 2 0 0 2 2 2 0 FhuF 2Fe-2S C-terminal domain RPAP2_Rtr1 PF04181.13 NODE_82309_length_193_cov_1.259494_g74368_i0reverse_frame_2 - 1 9.7 5.5 5.2 7.5 5.5 2.2 1 1 0 1 1 1 0 Rtr1/RPAP2 family RNA_pol_Rpb4 PF03874.16 NODE_82301_length_193_cov_1.265823_g74360_i0forward_frame_2 - 0.075 13.4 0.0 0.078 13.3 0.0 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb4 LRRCT PF01463.24 NODE_82296_length_193_cov_1.272152_g74355_i0reverse_frame_2 - 0.17 12.5 1.4 0.65 10.7 0.0 2.2 2 0 0 2 2 2 0 Leucine rich repeat C-terminal domain DUF5531 PF17671.1 NODE_82295_length_193_cov_1.272152_g74354_i0reverse_frame_2 - 2 8.3 6.4 2.4 8.0 6.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5531) PhaG_MnhG_YufB PF03334.14 NODE_82289_length_193_cov_1.322785_g74348_i0forward_frame_3 - 0.05 13.8 0.0 0.058 13.6 0.0 1.2 1 0 0 1 1 1 0 Na+/H+ antiporter subunit POC1 PF10450.9 NODE_82288_length_193_cov_1.329114_g74347_i0forward_frame_2 - 0.18 10.7 0.1 0.21 10.5 0.1 1.1 1 0 0 1 1 1 0 POC1 chaperone CBP4 PF07960.11 NODE_82287_length_193_cov_1.341772_g74346_i0forward_frame_2 - 0.019 14.8 0.0 0.023 14.5 0.0 1.1 1 0 0 1 1 1 0 CBP4 CAMSAP_CH PF11971.8 NODE_82287_length_193_cov_1.341772_g74346_i0forward_frame_2 - 0.039 13.8 0.0 0.048 13.5 0.0 1.2 1 0 0 1 1 1 0 CAMSAP CH domain zf-UBP PF02148.19 NODE_82286_length_193_cov_1.341772_g74345_i0forward_frame_3 - 0.51 10.7 7.5 13 6.2 7.5 2.0 1 1 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein E_raikovi_mat PF06360.11 NODE_82286_length_193_cov_1.341772_g74345_i0forward_frame_3 - 5.3 7.5 9.8 2.5 8.6 2.5 2.4 2 1 0 2 2 2 0 Euplotes raikovi mating pheromone Phenol_hyd_sub PF06099.11 NODE_82281_length_193_cov_1.373418_g74340_i0reverse_frame_2 - 0.15 12.0 0.8 0.26 11.3 0.2 1.6 2 0 0 2 2 2 0 Phenol hydroxylase subunit Ank_4 PF13637.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 1e-07 32.3 0.1 7.8e-06 26.3 0.0 1.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 1.5e-07 31.5 0.1 3.6e-07 30.3 0.0 1.6 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 4.3e-07 30.4 0.0 5.1e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 1.3e-06 28.5 0.1 1.5e-06 28.3 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_82277_length_193_cov_1.386076_g74336_i0reverse_frame_2 - 3.4e-05 23.9 0.0 5e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeat DENN PF02141.21 NODE_82275_length_193_cov_1.392405_g74334_i0reverse_frame_3 - 0.0087 16.0 0.0 0.0092 15.9 0.0 1.1 1 0 0 1 1 1 1 DENN (AEX-3) domain Baculo_p48 PF04878.13 NODE_82275_length_193_cov_1.392405_g74334_i0forward_frame_3 - 0.0065 15.5 2.3 0.0072 15.3 2.3 1.0 1 0 0 1 1 1 1 Baculovirus P48 protein ASFV_L11L PF05293.11 NODE_82274_length_193_cov_1.398734_g74333_i0forward_frame_2 - 0.04 14.2 0.4 0.061 13.7 0.4 1.4 1 1 0 1 1 1 0 African swine fever virus (ASFV) L11L protein Lamprin PF06403.11 NODE_82273_length_193_cov_1.398734_g74332_i0forward_frame_3 - 0.028 14.4 0.1 0.028 14.4 0.1 1.2 1 0 0 1 1 1 0 Lamprin Tetradecapep PF08187.11 NODE_82273_length_193_cov_1.398734_g74332_i0forward_frame_2 - 0.084 12.9 0.1 0.084 12.9 0.1 1.9 2 0 0 2 2 2 0 Myoactive tetradecapeptides family His_Phos_1 PF00300.22 NODE_82271_length_193_cov_1.405063_g74330_i0reverse_frame_3 - 0.0015 18.2 0.0 0.0016 18.2 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DUF3099 PF11298.8 NODE_82270_length_193_cov_1.411392_g74329_i0reverse_frame_3 - 0.064 13.4 0.4 0.082 13.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) Ribosomal_S27 PF01599.19 NODE_82265_length_193_cov_1.436709_g74324_i0forward_frame_3 - 0.14 12.3 2.6 0.25 11.5 2.6 1.4 1 0 0 1 1 1 0 Ribosomal protein S27a ESR1_C PF12743.7 NODE_82264_length_193_cov_1.443038_g74323_i0reverse_frame_3 - 0.067 13.0 0.1 0.097 12.5 0.1 1.2 1 0 0 1 1 1 0 Oestrogen-type nuclear receptor final C-terminal TB2_DP1_HVA22 PF03134.19 NODE_82256_length_193_cov_1.493671_g74315_i0reverse_frame_2 - 0.059 13.3 2.5 0.068 13.1 2.5 1.1 1 0 0 1 1 1 0 TB2/DP1, HVA22 family LIM PF00412.22 NODE_82252_length_193_cov_1.500000_g74311_i0forward_frame_3 - 0.017 15.3 2.8 0.017 15.3 2.8 1.5 2 0 0 2 2 2 0 LIM domain Toxin_14 PF07829.11 NODE_82251_length_193_cov_1.506329_g74310_i0reverse_frame_2 - 1.6 8.7 7.0 0.47 10.4 3.9 1.9 2 0 0 2 2 2 0 Alpha-A conotoxin PIVA-like protein DUF4644 PF15486.6 NODE_82250_length_193_cov_1.506329_g74309_i0reverse_frame_3 - 0.025 14.3 0.4 0.027 14.3 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4644) zf-3CxxC PF13695.6 NODE_82245_length_193_cov_1.512658_g74304_i0forward_frame_3 - 0.77 10.3 6.9 0.88 10.1 6.9 1.1 1 0 0 1 1 1 0 Zinc-binding domain ProQ_C PF17516.2 NODE_82242_length_193_cov_1.512658_g74301_i0reverse_frame_3 - 0.24 10.9 0.0 0.3 10.5 0.0 1.1 1 0 0 1 1 1 0 ProQ C-terminal domain DUF677 PF05055.12 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_3 - 1.6 7.5 4.2 1.5 7.7 4.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF677) Secretin_N_2 PF07655.13 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_2 - 0.019 15.5 6.0 0.022 15.3 6.0 1.1 1 0 0 1 1 1 0 Secretin N-terminal domain SR-25 PF10500.9 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_2 - 1.4 8.4 7.5 1.3 8.5 7.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Herpes_capsid PF06112.11 NODE_82242_length_193_cov_1.512658_g74301_i0forward_frame_2 - 2 8.5 8.1 2.4 8.2 8.1 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Arteri_Gl PF00951.18 NODE_82235_length_193_cov_1.518987_g74294_i0forward_frame_2 - 0.4 10.5 5.9 0.4 10.5 5.9 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein RcsF PF16358.5 NODE_82230_length_193_cov_1.518987_g74289_i0reverse_frame_2 - 0.0036 17.4 0.1 0.0043 17.1 0.1 1.0 1 0 0 1 1 1 1 RcsF lipoprotein DUF995 PF06191.12 NODE_82229_length_193_cov_1.518987_g74288_i0forward_frame_3 - 0.069 12.8 0.0 0.071 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF995) Glyco_transf_88 PF16849.5 NODE_82228_length_193_cov_1.518987_g74287_i0forward_frame_2 - 0.016 14.2 0.2 0.017 14.1 0.2 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 88 DUF1708 PF08101.11 NODE_82226_length_193_cov_1.518987_g74285_i0reverse_frame_3 - 0.016 14.4 0.0 0.016 14.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1708) VSP PF03302.13 NODE_82221_length_193_cov_1.518987_g74280_i0forward_frame_3 - 0.025 13.5 6.4 0.027 13.4 6.4 1.0 1 0 0 1 1 1 0 Giardia variant-specific surface protein UPF0560 PF10577.9 NODE_82220_length_193_cov_1.518987_g74279_i0forward_frame_3 - 0.2 10.1 0.0 0.2 10.1 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 Cys_Met_Meta_PP PF01053.20 NODE_82216_length_193_cov_1.537975_g74275_i0reverse_frame_3 - 0.036 12.6 0.0 0.041 12.4 0.0 1.0 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme MOR2-PAG1_N PF14222.6 NODE_82215_length_193_cov_1.550633_g74274_i0forward_frame_3 - 0.097 11.6 0.1 0.11 11.5 0.1 1.0 1 0 0 1 1 1 0 Cell morphogenesis N-terminal ACT_7 PF13840.6 NODE_82215_length_193_cov_1.550633_g74274_i0forward_frame_2 - 0.079 12.8 0.0 0.097 12.5 0.0 1.2 1 0 0 1 1 1 0 ACT domain TIMP PF00965.17 NODE_82213_length_193_cov_1.556962_g74272_i0forward_frame_2 - 0.008 16.0 0.4 0.0083 16.0 0.4 1.1 1 0 0 1 1 1 1 Tissue inhibitor of metalloproteinase PerC PF06069.11 NODE_82212_length_193_cov_1.563291_g74271_i0forward_frame_3 - 0.16 12.3 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 PerC transcriptional activator TTL PF03133.15 NODE_82210_length_193_cov_1.588608_g74269_i0forward_frame_3 - 1.7e-11 43.8 0.0 1.7e-11 43.8 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Baculo_ME53 PF06061.11 NODE_82207_length_193_cov_1.613924_g74266_i0forward_frame_2 - 0.012 14.9 0.6 0.012 14.8 0.6 1.0 1 0 0 1 1 1 0 Baculoviridae ME53 TSC22 PF01166.18 NODE_82207_length_193_cov_1.613924_g74266_i0forward_frame_2 - 0.028 14.7 0.0 0.04 14.2 0.0 1.2 1 0 0 1 1 1 0 TSC-22/dip/bun family bZIP_1 PF00170.21 NODE_82207_length_193_cov_1.613924_g74266_i0forward_frame_2 - 0.11 12.7 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 bZIP transcription factor DUF463 PF04317.12 NODE_82206_length_193_cov_1.613924_g74265_i0forward_frame_3 - 0.12 11.3 0.0 0.13 11.2 0.0 1.0 1 0 0 1 1 1 0 YcjX-like family, DUF463 EF-hand_13 PF17958.1 NODE_82202_length_193_cov_1.620253_g74261_i0forward_frame_2 - 0.09 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain UL40 PF10682.9 NODE_82201_length_193_cov_1.620253_g74260_i0reverse_frame_2 - 0.21 11.2 0.8 0.27 10.9 0.8 1.1 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 Zincin_2 PF10103.9 NODE_82198_length_193_cov_1.645570_g74257_i0reverse_frame_3 - 0.15 11.3 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 Zincin-like metallopeptidase PBP1_TM PF14812.6 NODE_82195_length_193_cov_1.677215_g74254_i0reverse_frame_3 - 0.13 12.7 0.6 0.16 12.4 0.6 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF2294 PF10057.9 NODE_82194_length_193_cov_1.683544_g74253_i0forward_frame_2 - 0.053 13.7 0.0 0.062 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2294) zf-BED PF02892.15 NODE_82193_length_193_cov_1.689873_g74252_i0reverse_frame_2 - 0.089 12.8 6.7 0.54 10.3 6.7 2.1 1 1 0 1 1 1 0 BED zinc finger Gsf2 PF11055.8 NODE_82192_length_193_cov_1.696203_g74251_i0forward_frame_2 - 0.023 13.5 0.1 0.023 13.5 0.1 1.1 1 0 0 1 1 1 0 Glucose signalling factor 2 AC_N PF16214.5 NODE_82190_length_193_cov_1.721519_g74249_i0reverse_frame_2 - 0.62 9.1 3.0 0.62 9.1 3.0 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Cyclotide PF03784.13 NODE_82189_length_193_cov_1.727848_g74248_i0reverse_frame_3 - 1.5 9.0 7.5 3.6 7.8 1.0 2.2 2 0 0 2 2 2 0 Cyclotide family Myb_DNA-bind_6 PF13921.6 NODE_82185_length_193_cov_1.746835_g74244_i0reverse_frame_3 - 0.019 15.2 0.1 0.022 15.0 0.1 1.1 1 0 0 1 1 1 0 Myb-like DNA-binding domain DUF1636 PF07845.11 NODE_82182_length_193_cov_1.759494_g74241_i0forward_frame_2 - 0.061 13.8 0.0 0.064 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) DUF1319 PF07028.11 NODE_82182_length_193_cov_1.759494_g74241_i0forward_frame_2 - 0.099 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1319) GTP1_OBG PF01018.22 NODE_82179_length_193_cov_1.772152_g74238_i0reverse_frame_3 - 1.6e-15 57.0 0.4 1.7e-15 56.9 0.4 1.0 1 0 0 1 1 1 1 GTP1/OBG DUF5473 PF17567.2 NODE_82178_length_193_cov_1.772152_g74237_i0reverse_frame_3 - 0.13 12.6 4.2 0.14 12.4 4.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5473) Ribosomal_L11 PF00298.19 NODE_82178_length_193_cov_1.772152_g74237_i0reverse_frame_2 - 0.078 13.5 0.0 0.09 13.3 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11, RNA binding domain ZapB PF06005.12 NODE_82177_length_193_cov_1.772152_g74236_i0forward_frame_3 - 0.048 14.1 3.6 0.08 13.4 3.6 1.4 1 1 0 1 1 1 0 Cell division protein ZapB TSC22 PF01166.18 NODE_82177_length_193_cov_1.772152_g74236_i0forward_frame_3 - 0.1 12.9 1.5 0.21 11.9 0.8 1.9 1 1 1 2 2 2 0 TSC-22/dip/bun family Ndufs5 PF10200.9 NODE_82177_length_193_cov_1.772152_g74236_i0forward_frame_2 - 0.073 13.3 0.5 0.084 13.1 0.5 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa F-box-like PF12937.7 NODE_82175_length_193_cov_1.778481_g74234_i0reverse_frame_2 - 0.0037 17.1 0.1 0.0037 17.1 0.1 1.7 1 1 1 2 2 2 1 F-box-like PHD_Oberon PF07227.11 NODE_82175_length_193_cov_1.778481_g74234_i0forward_frame_3 - 0.026 14.4 1.4 0.03 14.2 1.4 1.0 1 0 0 1 1 1 0 PHD - plant homeodomain finger protein Tmp39 PF10271.9 NODE_82172_length_193_cov_1.791139_g74231_i0reverse_frame_3 - 0.035 13.1 0.1 0.039 13.0 0.1 1.0 1 0 0 1 1 1 0 Putative transmembrane protein Col_cuticle_N PF01484.17 NODE_82172_length_193_cov_1.791139_g74231_i0reverse_frame_3 - 0.67 10.1 3.4 1.3 9.1 3.4 1.4 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain DUF4217 PF13959.6 NODE_82170_length_193_cov_1.848101_g74229_i0reverse_frame_3 - 0.067 13.4 0.1 0.082 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4217) NADHdh-2_N PF12155.8 NODE_82170_length_193_cov_1.848101_g74229_i0forward_frame_2 - 0.0087 16.4 1.1 0.01 16.2 1.1 1.0 1 0 0 1 1 1 1 NADH dehydrogenase subunit 2 N-terminal Hydrophob_seed PF14547.6 NODE_82166_length_193_cov_1.873418_g74225_i0reverse_frame_3 - 0.081 13.1 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Hydrophobic seed protein HTH_Tnp_Tc5 PF03221.16 NODE_82164_length_193_cov_1.898734_g74223_i0reverse_frame_3 - 0.16 12.0 1.0 0.27 11.3 1.0 1.4 1 0 0 1 1 1 0 Tc5 transposase DNA-binding domain FAM176 PF14851.6 NODE_82164_length_193_cov_1.898734_g74223_i0forward_frame_2 - 1.2 8.8 3.1 1.3 8.7 3.1 1.1 1 0 0 1 1 1 0 FAM176 family TMEMspv1-c74-12 PF11044.8 NODE_82160_length_193_cov_1.943038_g74219_i0reverse_frame_3 - 5.8 7.0 9.8 2.4e+02 1.8 9.5 3.0 1 1 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein TMEMspv1-c74-12 PF11044.8 NODE_82160_length_193_cov_1.943038_g74219_i0reverse_frame_2 - 3 7.9 5.0 21 5.2 0.7 2.4 1 1 1 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF3270 PF11674.8 NODE_82160_length_193_cov_1.943038_g74219_i0reverse_frame_2 - 4 7.7 7.6 2.2 8.5 1.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3270) DUF717 PF05338.12 NODE_82158_length_193_cov_1.968354_g74217_i0reverse_frame_3 - 0.017 15.2 0.0 0.023 14.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF717) WD-3 PF09765.9 NODE_82158_length_193_cov_1.968354_g74217_i0reverse_frame_2 - 0.1 11.9 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 WD-repeat region NLBH PF05211.12 NODE_82155_length_193_cov_1.993671_g74214_i0forward_frame_2 - 0.1 12.1 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Neuraminyllactose-binding hemagglutinin precursor (NLBH) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks425.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks425.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks425.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks425.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:44:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DnaJ PF00226.31 NODE_82153_length_193_cov_2.006329_g74212_i0forward_frame_2 - 1.3e-05 25.2 0.0 1.4e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 DnaJ domain VirArc_Nuclease PF12187.8 NODE_82152_length_193_cov_2.006329_g74211_i0reverse_frame_3 - 0.077 12.5 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 Viral/Archaeal nuclease Tail_spike_N PF18668.1 NODE_82147_length_193_cov_2.018987_g74206_i0reverse_frame_2 - 0.13 12.2 0.3 0.13 12.2 0.3 1.7 2 1 0 2 2 2 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain Macoilin PF09726.9 NODE_82145_length_193_cov_2.018987_g74204_i0reverse_frame_2 - 0.21 10.1 1.7 0.22 10.1 1.7 1.1 1 0 0 1 1 1 0 Macoilin family Adeno_E3B PF03376.14 NODE_82143_length_193_cov_2.025316_g74202_i0reverse_frame_2 - 0.0073 16.5 0.4 0.009 16.2 0.4 1.3 1 0 0 1 1 1 1 Adenovirus E3B protein Sre PF03125.18 NODE_82134_length_193_cov_2.094937_g74193_i0reverse_frame_3 - 0.007 15.6 1.9 0.0075 15.5 1.9 1.0 1 0 0 1 1 1 1 C. elegans Sre G protein-coupled chemoreceptor DUF769 PF05590.11 NODE_82134_length_193_cov_2.094937_g74193_i0forward_frame_3 - 0.0035 16.8 0.0 0.0038 16.7 0.0 1.0 1 0 0 1 1 1 1 Xylella fastidiosa protein of unknown function (DUF769) RRXRR PF14239.6 NODE_82131_length_193_cov_2.113924_g74190_i0forward_frame_3 - 0.026 14.4 0.8 0.028 14.3 0.8 1.1 1 0 0 1 1 1 0 RRXRR protein DUF3961 PF13106.6 NODE_82129_length_193_cov_2.139241_g74188_i0forward_frame_2 - 0.1 12.2 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3961) Peripla_BP_2 PF01497.18 NODE_82127_length_193_cov_2.189873_g74186_i0forward_frame_2 - 0.017 14.7 0.0 0.018 14.6 0.0 1.0 1 0 0 1 1 1 0 Periplasmic binding protein Fer4_19 PF06902.11 NODE_82122_length_193_cov_2.265823_g74181_i0reverse_frame_3 - 0.16 12.1 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster RNase_PH PF01138.21 NODE_82121_length_193_cov_2.284810_g74180_i0reverse_frame_2 - 0.021 15.3 0.0 0.023 15.2 0.0 1.1 1 0 0 1 1 1 0 3' exoribonuclease family, domain 1 LpxI_N PF17930.1 NODE_82121_length_193_cov_2.284810_g74180_i0reverse_frame_2 - 0.19 11.6 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 LpxI N-terminal domain Opiods_neuropep PF01160.18 NODE_82120_length_193_cov_2.310127_g74179_i0forward_frame_3 - 0.047 13.8 2.8 0.061 13.4 2.8 1.1 1 0 0 1 1 1 0 Vertebrate endogenous opioids neuropeptide Pox_E6 PF04656.12 NODE_82117_length_193_cov_2.341772_g74176_i0reverse_frame_3 - 0.15 10.5 0.0 0.17 10.3 0.0 1.0 1 0 0 1 1 1 0 Pox virus E6 protein PapD_N PF00345.20 NODE_82115_length_193_cov_2.348101_g74174_i0reverse_frame_2 - 1.1e-19 70.5 0.1 1.2e-19 70.4 0.1 1.0 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain DUF5357 PF17310.2 NODE_82115_length_193_cov_2.348101_g74174_i0forward_frame_2 - 0.045 12.3 0.1 0.05 12.2 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) Cauli_AT PF03233.13 NODE_82112_length_193_cov_2.373418_g74171_i0forward_frame_3 - 0.043 13.7 2.2 0.048 13.6 2.2 1.0 1 0 0 1 1 1 0 Aphid transmission protein Cut12 PF11500.8 NODE_82112_length_193_cov_2.373418_g74171_i0forward_frame_3 - 0.14 12.1 2.1 0.22 11.5 2.1 1.4 1 1 0 1 1 1 0 Spindle pole body formation-associated protein LRV_FeS PF05484.11 NODE_82109_length_193_cov_2.386076_g74168_i0forward_frame_2 - 0.053 13.5 0.9 0.066 13.2 0.9 1.3 1 1 0 1 1 1 0 LRV protein FeS4 cluster DUF5461 PF17545.2 NODE_82106_length_193_cov_2.474684_g74165_i0reverse_frame_3 - 0.12 12.7 0.2 0.14 12.5 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5461) ABC_membrane PF00664.23 NODE_82105_length_193_cov_2.474684_g74164_i0forward_frame_2 - 7.5e-06 25.8 0.0 7.5e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region DUF5045 PF16464.5 NODE_82100_length_193_cov_2.518987_g74159_i0forward_frame_3 - 0.093 13.0 0.6 0.11 12.8 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5045) FSAP_sig_propep PF03032.15 NODE_82098_length_193_cov_2.525316_g74157_i0forward_frame_3 - 0.26 11.4 4.5 0.37 10.8 4.5 1.3 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide Furin-like PF00757.20 NODE_82096_length_193_cov_2.575949_g74155_i0reverse_frame_2 - 0.038 13.9 8.0 0.04 13.8 8.0 1.1 1 0 0 1 1 1 0 Furin-like cysteine rich region HATPase_c PF02518.26 NODE_82092_length_193_cov_2.664557_g74151_i0forward_frame_3 - 1.4e-06 28.8 0.0 1.6e-06 28.6 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4381 PF14316.6 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.0045 17.2 0.4 0.0052 17.0 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4381) SRTM1 PF15872.5 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.0098 16.0 0.2 0.011 15.8 0.2 1.1 1 0 0 1 1 1 1 Serine-rich and transmembrane domain-containing protein 1 PAP2_3 PF14378.6 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.024 14.3 0.3 0.024 14.3 0.3 1.0 1 0 0 1 1 1 0 PAP2 superfamily BatD PF13584.6 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.025 13.4 0.1 0.025 13.4 0.1 1.0 1 0 0 1 1 1 0 Oxygen tolerance DUF4131 PF13567.6 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 0.054 13.2 1.8 0.064 12.9 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) CcmD PF04995.14 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_3 - 1.1 9.4 8.8 1.5 8.9 8.8 1.2 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Mucin PF01456.17 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_2 - 0.0095 15.9 19.0 0.01 15.8 19.0 1.1 1 0 0 1 1 1 1 Mucin-like glycoprotein FSA_C PF10479.9 NODE_82089_length_193_cov_2.689873_g74148_i0forward_frame_2 - 2.4 6.2 6.7 2.2 6.3 6.7 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus GPAT_N PF14829.6 NODE_82088_length_193_cov_2.689873_g74147_i0reverse_frame_2 - 0.058 13.4 0.0 0.084 12.9 0.0 1.2 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase N-terminal CysG_dimeriser PF10414.9 NODE_82083_length_193_cov_2.822785_g74142_i0reverse_frame_2 - 0.07 12.9 0.3 0.073 12.8 0.3 1.1 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region RCR PF12273.8 NODE_82081_length_193_cov_2.911392_g74140_i0forward_frame_2 - 0.11 13.2 0.0 0.12 13.0 0.0 1.1 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red Trimer_CC PF08954.11 NODE_82069_length_193_cov_3.253165_g74128_i0reverse_frame_3 - 0.0078 15.7 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 Trimerisation motif NrfD PF03916.14 NODE_82069_length_193_cov_3.253165_g74128_i0forward_frame_3 - 0.19 11.4 0.0 0.2 11.3 0.0 1.0 1 0 0 1 1 1 0 Polysulphide reductase, NrfD DUF2427 PF10348.9 NODE_82068_length_193_cov_3.253165_g74127_i0reverse_frame_2 - 0.058 13.2 0.5 0.066 13.0 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2427) DUF1075 PF06388.11 NODE_82067_length_193_cov_3.291139_g74126_i0forward_frame_3 - 0.18 11.9 0.8 0.28 11.3 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1075) GASA PF02704.14 NODE_82064_length_193_cov_3.670886_g74123_i0forward_frame_2 - 0.0076 16.4 8.7 0.0098 16.0 8.7 1.2 1 0 0 1 1 1 1 Gibberellin regulated protein DUF3937 PF13073.6 NODE_82060_length_193_cov_4.044304_g74119_i0reverse_frame_2 - 0.094 12.8 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3937) Myosin_head PF00063.21 NODE_82060_length_193_cov_4.044304_g74119_i0forward_frame_2 - 0.099 10.8 0.1 0.11 10.6 0.1 1.0 1 0 0 1 1 1 0 Myosin head (motor domain) SRTM1 PF15872.5 NODE_82059_length_193_cov_4.139241_g74118_i0reverse_frame_2 - 0.055 13.6 0.0 0.062 13.5 0.0 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 Na_H_Exchanger PF00999.21 NODE_82057_length_193_cov_4.411392_g74116_i0forward_frame_2 - 2.3e-08 33.2 0.3 2.5e-08 33.2 0.3 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family PAN_3 PF08277.12 NODE_82053_length_193_cov_12.569620_g74112_i0forward_frame_3 - 0.42 10.5 4.0 0.53 10.1 4.0 1.1 1 0 0 1 1 1 0 PAN-like domain Pkinase PF00069.25 NODE_82052_length_193_cov_15.848101_g74111_i0reverse_frame_3 - 0.00025 20.5 0.1 0.00027 20.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain DUF5438 PF17506.2 NODE_82051_length_193_cov_16.278481_g74110_i0forward_frame_2 - 0.011 16.1 0.6 0.013 15.9 0.6 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5438) PilO PF04350.13 NODE_82050_length_193_cov_22.569620_g74109_i0reverse_frame_3 - 0.038 14.1 0.1 0.039 14.1 0.1 1.1 1 0 0 1 1 1 0 Pilus assembly protein, PilO ComK PF06338.11 NODE_82050_length_193_cov_22.569620_g74109_i0reverse_frame_2 - 0.019 14.6 0.3 0.021 14.4 0.3 1.1 1 0 0 1 1 1 0 ComK protein Clat_adaptor_s PF01217.20 NODE_82050_length_193_cov_22.569620_g74109_i0forward_frame_3 - 0.057 13.3 0.8 0.063 13.2 0.8 1.1 1 0 0 1 1 1 0 Clathrin adaptor complex small chain YidD PF01809.18 NODE_82049_length_193_cov_23.518987_g74108_i0reverse_frame_2 - 0.016 15.1 0.2 0.017 15.0 0.2 1.1 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor RE_HindIII PF09518.10 NODE_82047_length_193_cov_25.221519_g74106_i0forward_frame_3 - 0.25 10.5 0.2 0.27 10.4 0.2 1.0 1 0 0 1 1 1 0 HindIII restriction endonuclease Histone_H2A_C PF16211.5 NODE_82046_length_193_cov_25.474684_g74105_i0forward_frame_3 - 0.54 10.0 3.9 0.8 9.5 3.9 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A HBS1_N PF08938.10 NODE_82045_length_193_cov_27.284810_g74104_i0reverse_frame_2 - 0.067 13.5 0.2 0.083 13.2 0.2 1.2 1 0 0 1 1 1 0 HBS1 N-terminus DUF2206 PF09971.9 NODE_82045_length_193_cov_27.284810_g74104_i0forward_frame_3 - 0.041 12.6 0.6 0.048 12.4 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) DUF5318 PF17249.2 NODE_82044_length_193_cov_28.037975_g74103_i0reverse_frame_3 - 0.012 15.4 0.0 0.013 15.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5318) UCR_hinge PF02320.16 NODE_82043_length_193_cov_28.683544_g74102_i0forward_frame_3 - 0.016 15.4 0.2 0.021 15.0 0.2 1.1 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein RANK_CRD_2 PF18278.1 NODE_82043_length_193_cov_28.683544_g74102_i0forward_frame_3 - 0.11 12.7 2.3 0.33 11.1 0.3 2.2 2 0 0 2 2 2 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 FUSC_2 PF13515.6 NODE_82042_length_193_cov_28.721519_g74101_i0forward_frame_2 - 0.058 13.5 1.3 0.082 13.0 1.3 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein-like AAA_lid_11 PF18198.1 NODE_82040_length_193_cov_29.101266_g74099_i0reverse_frame_3 - 0.12 12.1 0.5 0.12 12.1 0.5 1.0 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain VID27 PF08553.10 NODE_82040_length_193_cov_29.101266_g74099_i0reverse_frame_3 - 0.15 11.1 0.0 0.16 11.0 0.0 1.0 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain DUF5435 PF17503.2 NODE_82037_length_193_cov_31.436709_g74096_i0reverse_frame_3 - 0.055 13.2 0.1 0.067 12.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5435) Tlr3_TMD PF17968.1 NODE_82036_length_193_cov_33.272152_g74095_i0reverse_frame_2 - 0.58 10.4 4.4 0.88 9.8 4.4 1.3 1 0 0 1 1 1 0 Toll-like receptor 3 trans-membrane domain ABC_membrane PF00664.23 NODE_82036_length_193_cov_33.272152_g74095_i0forward_frame_3 - 0.71 9.5 6.0 0.79 9.3 6.0 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region FliG_C PF01706.16 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_2 - 0.0099 16.1 2.0 0.01 16.0 2.0 1.1 1 0 0 1 1 1 1 FliG C-terminal domain PepSY_TM_like_2 PF16357.5 NODE_82028_length_193_cov_36.525316_g74087_i0reverse_frame_2 - 0.39 10.7 2.5 0.43 10.5 2.5 1.0 1 0 0 1 1 1 0 Putative PepSY_TM-like DUF359 PF04019.12 NODE_82027_length_193_cov_36.746835_g74086_i0reverse_frame_3 - 0.081 12.6 3.0 0.098 12.3 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF359) SID-1_RNA_chan PF13965.6 NODE_82027_length_193_cov_36.746835_g74086_i0reverse_frame_3 - 1.3 7.3 4.6 1.3 7.3 4.6 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 SPT6_acidic PF14632.6 NODE_82027_length_193_cov_36.746835_g74086_i0reverse_frame_2 - 0.048 14.2 8.8 0.057 14.0 8.8 1.0 1 0 0 1 1 1 0 Acidic N-terminal SPT6 ETRAMP PF09716.10 NODE_82027_length_193_cov_36.746835_g74086_i0reverse_frame_2 - 1.8 8.7 5.8 2 8.6 5.8 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Memo PF01875.17 NODE_82026_length_193_cov_37.708861_g74085_i0reverse_frame_3 - 0.0017 17.5 0.0 0.0021 17.2 0.0 1.1 1 0 0 1 1 1 1 Memo-like protein MatE PF01554.18 NODE_82024_length_193_cov_40.936709_g74083_i0reverse_frame_3 - 0.041 13.5 0.3 0.044 13.4 0.3 1.0 1 0 0 1 1 1 0 MatE Peptidase_M17 PF00883.21 NODE_82021_length_193_cov_42.930380_g74080_i0reverse_frame_2 - 0.26 10.5 0.0 0.3 10.3 0.0 1.0 1 0 0 1 1 1 0 Cytosol aminopeptidase family, catalytic domain AAA_17 PF13207.6 NODE_82021_length_193_cov_42.930380_g74080_i0forward_frame_3 - 0.028 14.9 0.0 0.031 14.7 0.0 1.0 1 0 0 1 1 1 0 AAA domain OrfB_Zn_ribbon PF07282.11 NODE_82016_length_193_cov_45.424051_g74075_i0reverse_frame_3 - 0.054 13.4 2.7 0.073 13.0 2.7 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Megourin PF17560.2 NODE_82014_length_193_cov_48.740506_g74073_i0forward_frame_2 - 0.03 14.6 0.2 0.04 14.2 0.2 1.1 1 0 0 1 1 1 0 Aphid Megourins zf-CCCH_4 PF18044.1 NODE_82013_length_193_cov_50.227848_g74072_i0forward_frame_2 - 0.25 11.2 5.3 0.24 11.2 2.0 2.3 2 0 0 2 2 2 0 CCCH-type zinc finger zf-CCCH_2 PF14608.6 NODE_82013_length_193_cov_50.227848_g74072_i0forward_frame_2 - 1.2 9.7 8.2 0.22 12.1 2.9 2.4 2 1 0 2 2 2 0 RNA-binding, Nab2-type zinc finger MORN PF02493.20 NODE_82010_length_193_cov_57.537975_g74069_i0reverse_frame_3 - 0.00049 19.8 5.7 0.002 17.9 0.9 2.3 2 0 0 2 2 2 2 MORN repeat LZ_Tnp_IS481 PF13011.6 NODE_82009_length_193_cov_57.601266_g74068_i0forward_frame_3 - 0.13 12.9 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 DOG1 PF14144.6 NODE_82008_length_193_cov_59.892405_g74067_i0forward_frame_2 - 0.16 12.2 0.1 0.24 11.6 0.1 1.2 1 0 0 1 1 1 0 Seed dormancy control SHIRT PF18655.1 NODE_82006_length_193_cov_63.120253_g74065_i0reverse_frame_3 - 0.12 13.0 0.0 0.14 12.8 0.0 1.1 1 0 0 1 1 1 0 SHIRT domain Neurokinin_B PF03823.14 NODE_82001_length_193_cov_71.493671_g74060_i0reverse_frame_3 - 0.044 13.8 0.5 0.068 13.2 0.5 1.3 1 0 0 1 1 1 0 Neurokinin B AOX PF01786.17 NODE_81998_length_193_cov_73.753165_g74057_i0forward_frame_2 - 0.014 15.0 1.6 0.016 14.8 1.6 1.1 1 0 0 1 1 1 0 Alternative oxidase DUF1600 PF07667.11 NODE_81997_length_193_cov_79.841772_g74056_i0forward_frame_2 - 0.11 12.7 5.1 0.12 12.6 5.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) TSGP1 PF07771.11 NODE_81996_length_193_cov_80.177215_g74055_i0forward_frame_3 - 0.22 11.7 2.8 0.25 11.5 2.8 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 PH PF00169.29 NODE_81995_length_193_cov_80.740506_g74054_i0reverse_frame_2 - 0.032 14.7 0.0 0.039 14.5 0.0 1.2 1 0 0 1 1 1 0 PH domain AA_permease PF00324.21 NODE_81993_length_193_cov_81.025316_g74052_i0reverse_frame_3 - 0.017 13.7 0.9 0.018 13.7 0.9 1.1 1 0 0 1 1 1 0 Amino acid permease Ras PF00071.22 NODE_81991_length_193_cov_81.272152_g74050_i0reverse_frame_3 - 0.00033 20.3 0.0 0.0004 20.0 0.0 1.1 1 0 0 1 1 1 1 Ras family ABC2_membrane_5 PF13346.6 NODE_81988_length_193_cov_93.240506_g74047_i0forward_frame_2 - 0.0078 15.8 1.7 0.0086 15.7 1.7 1.2 1 1 0 1 1 1 1 ABC-2 family transporter protein PP1 PF07430.11 NODE_81982_length_193_cov_111.063291_g74041_i0forward_frame_2 - 0.015 15.3 0.0 0.017 15.1 0.0 1.1 1 0 0 1 1 1 0 Phloem filament protein PP1 cystatin-like domain FXa_inhibition PF14670.6 NODE_81978_length_193_cov_120.765823_g74037_i0forward_frame_3 - 0.059 13.7 3.9 0.092 13.0 3.9 1.3 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site MTCP1 PF08991.10 NODE_81977_length_193_cov_149.151899_g74036_i0reverse_frame_2 - 0.019 15.2 0.3 0.025 14.8 0.3 1.3 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type Transglut_core3 PF13471.6 NODE_81976_length_193_cov_181.525316_g74035_i0forward_frame_3 - 0.0013 18.6 0.1 0.0014 18.5 0.1 1.1 1 0 0 1 1 1 1 Transglutaminase-like superfamily DpnI PF06044.12 NODE_81975_length_193_cov_208.924051_g74034_i0reverse_frame_2 - 1.2 8.8 3.6 1.7 8.3 2.8 1.6 1 1 1 2 2 2 0 Dam-replacing family ELYS-bb PF16687.5 NODE_81973_length_193_cov_243.468354_g74032_i0forward_frame_2 - 0.2 10.2 0.0 0.21 10.1 0.0 1.0 1 0 0 1 1 1 0 beta-propeller of ELYS nucleoporin DUF2014 PF09427.10 NODE_81972_length_193_cov_253.525316_g74031_i0reverse_frame_3 - 0.085 12.2 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2014) Pkinase PF00069.25 NODE_81971_length_193_cov_261.784810_g74030_i0reverse_frame_2 - 0.0022 17.4 1.5 0.14 11.5 1.5 2.0 1 1 0 1 1 1 1 Protein kinase domain Ribosomal_L3 PF00297.22 NODE_81967_length_193_cov_405.987342_g74026_i0reverse_frame_3 - 0.042 12.8 2.3 0.044 12.7 2.3 1.1 1 0 0 1 1 1 0 Ribosomal protein L3 BNR_4 PF15892.5 NODE_81960_length_194_cov_0.830189_g74019_i0reverse_frame_3 - 0.062 12.7 0.0 0.068 12.5 0.0 1.2 1 0 0 1 1 1 0 BNR repeat-containing family member DUF3810 PF12725.7 NODE_81957_length_194_cov_0.874214_g74016_i0forward_frame_2 - 8.6 5.6 8.8 9.4 5.5 8.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Dehalogenase PF13486.6 NODE_81954_length_194_cov_0.918239_g74013_i0reverse_frame_3 - 0.054 12.9 0.0 0.061 12.7 0.0 1.0 1 0 0 1 1 1 0 Reductive dehalogenase subunit HTH_Tnp_ISL3 PF13542.6 NODE_81950_length_194_cov_0.949686_g74009_i0forward_frame_3 - 0.04 13.3 0.0 0.056 12.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HnRNPA1 PF11627.8 NODE_81949_length_194_cov_0.962264_g74008_i0reverse_frame_3 - 0.26 11.5 4.0 0.39 10.9 4.0 1.3 1 0 0 1 1 1 0 Nuclear factor hnRNPA1 MRAP PF15183.6 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.0018 18.2 0.1 0.0021 18.0 0.1 1.1 1 0 0 1 1 1 1 Melanocortin-2 receptor accessory protein family HemY_N PF07219.13 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.016 15.4 1.3 0.018 15.3 1.3 1.1 1 0 0 1 1 1 0 HemY protein N-terminus Trp_oprn_chp PF09534.10 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.034 13.9 0.3 0.037 13.8 0.3 1.0 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Mito_carr PF00153.27 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 0.071 13.0 0.1 0.081 12.9 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial carrier protein EphA2_TM PF14575.6 NODE_81934_length_194_cov_1.000000_g73993_i0forward_frame_2 - 4.4 8.3 6.2 7.6 7.5 6.2 1.5 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain CBM_10 PF02013.16 NODE_81930_length_194_cov_1.000000_g73989_i0reverse_frame_3 - 0.018 15.5 0.1 0.018 15.5 0.1 1.6 2 0 0 2 2 2 0 Cellulose or protein binding domain BC10 PF06726.12 NODE_81930_length_194_cov_1.000000_g73989_i0reverse_frame_2 - 0.0099 16.1 0.0 0.0099 16.1 0.0 1.7 2 0 0 2 2 2 1 Bladder cancer-related protein BC10 DDDD PF10161.9 NODE_81930_length_194_cov_1.000000_g73989_i0forward_frame_3 - 0.13 12.0 0.1 0.16 11.8 0.1 1.2 1 0 0 1 1 1 0 Putative mitochondrial precursor protein NAD_binding_1 PF00175.21 NODE_81923_length_194_cov_1.000000_g73982_i0forward_frame_2 - 2.1e-06 28.3 0.0 2.4e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 NODE_81923_length_194_cov_1.000000_g73982_i0forward_frame_2 - 2.5e-05 24.5 0.0 3.1e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Ferric reductase NAD binding domain Zn-ribbon_8 PF09723.10 NODE_81922_length_194_cov_1.006289_g73981_i0reverse_frame_3 - 1.5 9.0 10.9 0.5 10.5 2.9 2.5 1 1 1 2 2 2 0 Zinc ribbon domain Noelin-1 PF12308.8 NODE_81917_length_194_cov_1.006289_g73976_i0forward_frame_3 - 0.03 14.3 1.2 0.035 14.1 1.2 1.1 1 0 0 1 1 1 0 Neurogenesis glycoprotein NrsF PF06532.11 NODE_81916_length_194_cov_1.006289_g73975_i0forward_frame_3 - 0.056 13.2 0.4 0.059 13.1 0.4 1.0 1 0 0 1 1 1 0 Negative regulator of sigma F FANCM-MHF_bd PF16783.5 NODE_81916_length_194_cov_1.006289_g73975_i0forward_frame_3 - 0.12 12.4 0.3 0.15 12.1 0.3 1.1 1 0 0 1 1 1 0 FANCM to MHF binding domain APC1_C PF18122.1 NODE_81913_length_194_cov_1.006289_g73972_i0reverse_frame_2 - 0.08 12.9 1.4 0.083 12.8 1.4 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex sub unit 1 C-terminal domain Lectin_N PF03954.14 NODE_81913_length_194_cov_1.006289_g73972_i0forward_frame_3 - 0.012 15.3 0.8 0.014 15.1 0.8 1.1 1 0 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF641 PF04859.12 NODE_81913_length_194_cov_1.006289_g73972_i0forward_frame_3 - 0.022 15.1 0.4 0.024 15.0 0.4 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) zf-C3H2C3 PF17122.5 NODE_81911_length_194_cov_1.006289_g73970_i0reverse_frame_2 - 0.021 14.8 0.3 0.034 14.2 0.3 1.3 1 0 0 1 1 1 0 Zinc-finger DUF982 PF06169.12 NODE_81908_length_194_cov_1.006289_g73967_i0reverse_frame_3 - 0.078 13.0 0.3 0.1 12.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF982) SRCR PF00530.18 NODE_81905_length_194_cov_1.006289_g73964_i0reverse_frame_2 - 0.047 14.2 4.7 0.057 13.9 4.7 1.1 1 0 0 1 1 1 0 Scavenger receptor cysteine-rich domain TrkA_TMD PF18613.1 NODE_81897_length_194_cov_1.006289_g73956_i0reverse_frame_3 - 2.7 7.5 7.9 4.9 6.7 7.9 1.5 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain zf-SAP30 PF13866.6 NODE_81888_length_194_cov_1.006289_g73947_i0forward_frame_3 - 0.092 12.9 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 SAP30 zinc-finger mRNA_cap_enzyme PF01331.19 NODE_81883_length_194_cov_1.006289_g73942_i0forward_frame_3 - 0.0071 16.2 0.0 0.0087 15.9 0.0 1.1 1 0 0 1 1 1 1 mRNA capping enzyme, catalytic domain Sprouty PF05210.13 NODE_81877_length_194_cov_1.006289_g73936_i0forward_frame_2 - 0.016 15.6 1.8 0.017 15.5 1.8 1.1 1 0 0 1 1 1 0 Sprouty protein (Spry) zinc_ribbon_10 PF10058.9 NODE_81875_length_194_cov_1.006289_g73934_i0reverse_frame_2 - 0.02 14.6 0.4 0.02 14.6 0.4 1.6 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Lebercilin PF15619.6 NODE_81870_length_194_cov_1.006289_g73929_i0reverse_frame_3 - 0.0014 18.4 5.9 0.0016 18.2 5.9 1.0 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease FAM195 PF14799.6 NODE_81870_length_194_cov_1.006289_g73929_i0reverse_frame_3 - 0.0081 16.5 1.3 0.01 16.1 1.3 1.2 1 0 0 1 1 1 1 FAM195 family TMEM70 PF06979.12 NODE_81870_length_194_cov_1.006289_g73929_i0forward_frame_2 - 0.12 12.8 4.3 0.14 12.6 4.3 1.1 1 0 0 1 1 1 0 Assembly, mitochondrial proton-transport ATP synth complex NUC205 PF08168.11 NODE_81867_length_194_cov_1.006289_g73926_i0reverse_frame_3 - 0.12 11.9 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 NUC205 domain DUF4470 PF14737.6 NODE_81865_length_194_cov_1.012579_g73924_i0reverse_frame_3 - 0.012 15.7 0.0 0.014 15.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4470) zf-dskA_traR PF01258.17 NODE_81863_length_194_cov_1.056604_g73922_i0forward_frame_2 - 0.12 12.4 0.9 0.23 11.5 0.2 1.7 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger DOCK-C2 PF14429.6 NODE_81861_length_194_cov_1.069182_g73920_i0forward_frame_2 - 0.022 14.6 0.2 0.023 14.5 0.2 1.0 1 0 0 1 1 1 0 C2 domain in Dock180 and Zizimin proteins DUF3087 PF11286.8 NODE_81860_length_194_cov_1.075472_g73919_i0reverse_frame_3 - 0.016 14.7 0.1 0.017 14.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) zf-B_box PF00643.24 NODE_81859_length_194_cov_1.081761_g73918_i0forward_frame_2 - 1.9e-06 27.9 6.7 1.9e-06 27.9 6.7 1.5 2 0 0 2 2 2 1 B-box zinc finger Pico_P2A PF00947.19 NODE_81858_length_194_cov_1.094340_g73917_i0forward_frame_3 - 0.21 11.6 3.7 0.22 11.6 3.7 1.1 1 0 0 1 1 1 0 Picornavirus core protein 2A GTP_EFTU PF00009.27 NODE_81856_length_194_cov_1.094340_g73915_i0reverse_frame_3 - 2.6e-17 63.0 0.7 2.7e-17 62.9 0.7 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain ABC_tran PF00005.27 NODE_81856_length_194_cov_1.094340_g73915_i0reverse_frame_3 - 0.048 14.2 0.1 0.05 14.1 0.1 1.1 1 0 0 1 1 1 0 ABC transporter MMR_HSR1 PF01926.23 NODE_81856_length_194_cov_1.094340_g73915_i0reverse_frame_3 - 0.049 13.7 0.0 0.05 13.7 0.0 1.1 1 0 0 1 1 1 0 50S ribosome-binding GTPase F-box_5 PF18511.1 NODE_81856_length_194_cov_1.094340_g73915_i0reverse_frame_2 - 0.15 11.6 0.3 0.15 11.6 0.3 2.5 3 0 0 3 3 3 0 F-box 3-dmu-9_3-mt PF06983.13 NODE_81849_length_194_cov_1.119497_g73908_i0forward_frame_2 - 0.095 13.2 0.0 0.11 13.1 0.0 1.1 1 0 0 1 1 1 0 3-demethylubiquinone-9 3-methyltransferase DUF2460 PF09343.10 NODE_81848_length_194_cov_1.132075_g73907_i0reverse_frame_3 - 0.1 12.1 0.0 0.1 12.1 0.0 1.0 1 0 0 1 1 1 0 Conserved hypothetical protein 2217 (DUF2460) CAF1-p150_N PF15557.6 NODE_81848_length_194_cov_1.132075_g73907_i0reverse_frame_3 - 0.92 9.4 4.8 0.98 9.3 4.8 1.1 1 0 0 1 1 1 0 CAF1 complex subunit p150, region binding to PCNA Cytomega_TRL10 PF06084.11 NODE_81846_length_194_cov_1.132075_g73905_i0forward_frame_3 - 0.071 13.1 0.2 0.075 13.0 0.2 1.1 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein NinD PF17466.2 NODE_81846_length_194_cov_1.132075_g73905_i0forward_frame_2 - 0.13 12.4 0.2 0.16 12.1 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function TFIIA_gamma_C PF02751.14 NODE_81840_length_194_cov_1.163522_g73899_i0forward_frame_2 - 0.2 11.8 0.5 0.35 11.1 0.5 1.6 1 1 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit KRTAP7 PF15034.6 NODE_81835_length_194_cov_1.182390_g73894_i0forward_frame_2 - 0.029 15.3 0.0 0.033 15.1 0.0 1.1 1 0 0 1 1 1 0 KRTAP type 7 family DUF2111 PF09884.9 NODE_81835_length_194_cov_1.182390_g73894_i0forward_frame_2 - 0.11 12.5 0.0 0.12 12.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2111) DUF1082 PF06449.11 NODE_81834_length_194_cov_1.182390_g73893_i0forward_frame_2 - 0.0023 17.7 1.1 0.0036 17.1 0.1 1.8 2 0 0 2 2 2 1 Mitochondrial domain of unknown function (DUF1082) OTOS PF15182.6 NODE_81829_length_194_cov_1.220126_g73888_i0forward_frame_3 - 0.29 11.1 4.1 0.35 10.8 4.1 1.2 1 0 0 1 1 1 0 Otospiralin DUF3218 PF11508.8 NODE_81828_length_194_cov_1.232704_g73887_i0forward_frame_2 - 0.11 12.0 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3218) Mpp10 PF04006.12 NODE_81826_length_194_cov_1.245283_g73885_i0reverse_frame_3 - 0.054 11.9 0.1 0.054 11.9 0.1 1.1 1 0 0 1 1 1 0 Mpp10 protein DUF2197 PF09963.9 NODE_81826_length_194_cov_1.245283_g73885_i0reverse_frame_2 - 0.051 13.8 0.8 0.2 11.9 0.2 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) Pyridoxal_deC PF00282.19 NODE_81824_length_194_cov_1.245283_g73883_i0reverse_frame_2 - 0.098 11.4 0.1 0.1 11.3 0.1 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain Polo_box_2 PF18531.1 NODE_81822_length_194_cov_1.245283_g73881_i0reverse_frame_2 - 0.069 13.3 0.1 0.069 13.3 0.1 1.0 1 0 0 1 1 1 0 Polo box domain Potassium_chann PF11404.8 NODE_81817_length_194_cov_1.251572_g73876_i0reverse_frame_2 - 0.063 13.1 0.4 0.063 13.1 0.4 1.6 2 0 0 2 2 2 0 Potassium voltage-gated channel Kelch_4 PF13418.6 NODE_81815_length_194_cov_1.257862_g73874_i0reverse_frame_2 - 7.9e-06 25.8 0.0 1.6e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_6 PF13964.6 NODE_81815_length_194_cov_1.257862_g73874_i0reverse_frame_2 - 9.2e-05 22.6 0.0 0.00015 22.0 0.0 1.3 1 0 0 1 1 1 1 Kelch motif Kelch_3 PF13415.6 NODE_81815_length_194_cov_1.257862_g73874_i0reverse_frame_2 - 0.00012 22.3 0.9 0.00046 20.4 0.0 1.9 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_81815_length_194_cov_1.257862_g73874_i0reverse_frame_2 - 0.00064 19.3 0.0 0.001 18.6 0.0 1.4 1 0 0 1 1 1 1 Kelch motif HOOK PF05622.12 NODE_81814_length_194_cov_1.257862_g73873_i0forward_frame_3 - 0.011 13.9 0.8 0.012 13.8 0.8 1.0 1 0 0 1 1 1 0 HOOK protein Med6 PF04934.14 NODE_81809_length_194_cov_1.257862_g73868_i0reverse_frame_3 - 0.13 12.1 0.0 0.13 12.1 0.0 1.0 1 0 0 1 1 1 0 MED6 mediator sub complex component zf-TFIIIC PF12660.7 NODE_81807_length_194_cov_1.270440_g73866_i0forward_frame_3 - 0.045 13.7 1.0 0.05 13.6 0.9 1.3 1 1 0 1 1 1 0 Putative zinc-finger of transcription factor IIIC complex IF2_assoc PF08364.11 NODE_81806_length_194_cov_1.270440_g73865_i0forward_frame_3 - 0.099 12.9 0.1 0.16 12.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial translation initiation factor IF-2 associated region GWT1 PF06423.12 NODE_81805_length_194_cov_1.283019_g73864_i0reverse_frame_3 - 0.18 11.9 1.4 0.21 11.7 1.4 1.2 1 0 0 1 1 1 0 GWT1 Cullin_Nedd8 PF10557.9 NODE_81803_length_194_cov_1.283019_g73862_i0reverse_frame_3 - 0.11 12.6 0.6 0.37 10.9 0.6 1.9 1 1 0 1 1 1 0 Cullin protein neddylation domain DUF3373 PF11853.8 NODE_81801_length_194_cov_1.295597_g73860_i0forward_frame_3 - 0.06 12.4 0.1 0.06 12.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3373) DUF5083 PF16890.5 NODE_81800_length_194_cov_1.295597_g73859_i0forward_frame_3 - 0.025 14.3 1.0 0.029 14.1 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5083) TetR_C_1 PF02909.17 NODE_81797_length_194_cov_1.314465_g73856_i0forward_frame_3 - 0.0025 17.7 0.0 0.003 17.4 0.0 1.0 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain Toxin_9 PF02819.15 NODE_81794_length_194_cov_1.333333_g73853_i0reverse_frame_3 - 0.079 13.3 9.3 1.4 9.3 1.9 2.1 2 0 0 2 2 2 0 Spider toxin UL42 PF17638.2 NODE_81792_length_194_cov_1.333333_g73851_i0reverse_frame_3 - 0.1 12.6 1.4 0.11 12.4 1.4 1.1 1 0 0 1 1 1 0 HCMV UL42 Imm25 PF15564.6 NODE_81791_length_194_cov_1.339623_g73850_i0reverse_frame_3 - 0.052 13.5 0.1 0.057 13.3 0.1 1.1 1 0 0 1 1 1 0 Immunity protein 25 EGF_MSP1_1 PF12946.7 NODE_81785_length_194_cov_1.389937_g73844_i0forward_frame_3 - 0.16 12.1 2.5 0.28 11.3 1.6 1.9 2 1 0 2 2 2 0 MSP1 EGF domain 1 Trp_Tyr_perm PF03222.13 NODE_81785_length_194_cov_1.389937_g73844_i0forward_frame_2 - 2.4e-05 23.6 0.9 2.5e-05 23.5 0.9 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family Aa_trans PF01490.18 NODE_81785_length_194_cov_1.389937_g73844_i0forward_frame_2 - 0.0081 14.9 1.5 0.0087 14.8 1.5 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Chlam_OMP3 PF03503.13 NODE_81776_length_194_cov_1.421384_g73835_i0forward_frame_2 - 0.78 10.1 5.9 1.5 9.2 5.9 1.7 1 1 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 3 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks426.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks426.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks426.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks426.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF443 PF04276.12 NODE_81764_length_194_cov_1.484277_g73823_i0forward_frame_2 - 0.046 13.5 4.3 0.087 12.6 4.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF443) Sec62 PF03839.16 NODE_81763_length_194_cov_1.490566_g73822_i0reverse_frame_3 - 0.044 13.3 4.0 0.051 13.1 4.0 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 DUF4713 PF15831.5 NODE_81763_length_194_cov_1.490566_g73822_i0reverse_frame_3 - 0.41 11.1 7.7 0.57 10.7 7.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) UL42 PF17638.2 NODE_81763_length_194_cov_1.490566_g73822_i0reverse_frame_3 - 1.4 8.9 4.9 3.8 7.5 4.9 1.6 1 1 0 1 1 1 0 HCMV UL42 BRCA2 PF00634.18 NODE_81763_length_194_cov_1.490566_g73822_i0forward_frame_3 - 0.18 11.5 0.2 0.26 11.0 0.2 1.3 1 0 0 1 1 1 0 BRCA2 repeat Alpha-amylase PF00128.24 NODE_81755_length_194_cov_1.496855_g73814_i0forward_frame_3 - 0.11 12.0 0.0 0.12 11.9 0.0 1.0 1 0 0 1 1 1 0 Alpha amylase, catalytic domain DUF4211 PF13926.6 NODE_81755_length_194_cov_1.496855_g73814_i0forward_frame_2 - 0.064 13.3 0.0 0.066 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4211) RRM_5 PF13893.6 NODE_81750_length_194_cov_1.503145_g73809_i0reverse_frame_3 - 0.028 14.0 0.9 0.029 13.9 0.9 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Flp_N PF03930.14 NODE_81749_length_194_cov_1.503145_g73808_i0reverse_frame_2 - 0.041 13.9 0.0 0.054 13.5 0.0 1.1 1 0 0 1 1 1 0 Recombinase Flp protein N-terminus DUF1378 PF07125.11 NODE_81749_length_194_cov_1.503145_g73808_i0forward_frame_3 - 0.1 12.7 0.7 0.15 12.2 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1378) DUF2085 PF09858.9 NODE_81749_length_194_cov_1.503145_g73808_i0forward_frame_2 - 0.072 13.6 3.5 0.077 13.5 3.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2085) Corona_NS8 PF12093.8 NODE_81743_length_194_cov_1.509434_g73802_i0reverse_frame_3 - 0.018 15.6 0.4 0.02 15.5 0.4 1.1 1 0 0 1 1 1 0 Coronavirus NS8 protein HtrL_YibB PF09612.10 NODE_81743_length_194_cov_1.509434_g73802_i0forward_frame_3 - 0.032 13.8 0.2 0.032 13.7 0.2 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (HtrL_YibB) RcnB PF11776.8 NODE_81738_length_194_cov_1.509434_g73797_i0reverse_frame_2 - 0.014 15.4 0.2 0.022 14.8 0.2 1.3 1 0 0 1 1 1 0 Nickel/cobalt transporter regulator Apyrase PF06079.11 NODE_81731_length_194_cov_1.509434_g73790_i0forward_frame_3 - 0.24 10.6 0.0 0.25 10.5 0.0 1.0 1 0 0 1 1 1 0 Apyrase IN_DBD_C PF00552.21 NODE_81723_length_194_cov_1.534591_g73782_i0reverse_frame_3 - 0.13 11.5 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Integrase DNA binding domain TrkH PF02386.16 NODE_81723_length_194_cov_1.534591_g73782_i0reverse_frame_3 - 0.14 10.6 2.1 0.15 10.5 2.1 1.0 1 0 0 1 1 1 0 Cation transport protein FlhE PF06366.13 NODE_81723_length_194_cov_1.534591_g73782_i0forward_frame_3 - 0.11 12.4 0.2 0.12 12.4 0.2 1.1 1 0 0 1 1 1 0 Flagellar protein FlhE LLC1 PF14945.6 NODE_81721_length_194_cov_1.566038_g73780_i0forward_frame_2 - 0.21 12.2 0.1 0.22 12.1 0.1 1.1 1 0 0 1 1 1 0 Normal lung function maintenance, Low in Lung Cancer 1 protein Prefoldin_2 PF01920.20 NODE_81719_length_194_cov_1.572327_g73778_i0reverse_frame_2 - 0.018 15.0 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit DASH_Dam1 PF08653.10 NODE_81719_length_194_cov_1.572327_g73778_i0reverse_frame_2 - 0.018 14.8 0.5 0.17 11.7 0.2 1.9 1 1 1 2 2 2 0 DASH complex subunit Dam1 Rab3-GTPase_cat PF13890.6 NODE_81719_length_194_cov_1.572327_g73778_i0reverse_frame_2 - 0.041 13.5 0.2 0.081 12.6 0.2 1.5 1 1 1 2 2 2 0 Rab3 GTPase-activating protein catalytic subunit Plk4_PB2 PF18409.1 NODE_81719_length_194_cov_1.572327_g73778_i0reverse_frame_2 - 0.047 14.4 0.1 0.052 14.2 0.1 1.1 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 2 IL3Ra_N PF18611.1 NODE_81714_length_194_cov_1.610063_g73773_i0forward_frame_3 - 0.077 13.0 0.1 0.093 12.7 0.1 1.2 1 0 0 1 1 1 0 IL-3 receptor alpha chain N-terminal domain SpaA PF17802.1 NODE_81714_length_194_cov_1.610063_g73773_i0forward_frame_2 - 0.081 13.3 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Prealbumin-like fold domain Ntox1 PF15500.6 NODE_81712_length_194_cov_1.610063_g73771_i0forward_frame_3 - 0.11 12.8 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative RNase-like toxin, toxin_1 Ank_3 PF13606.6 NODE_81702_length_194_cov_1.685535_g73761_i0reverse_frame_2 - 0.0012 19.2 0.0 0.42 11.3 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_81702_length_194_cov_1.685535_g73761_i0reverse_frame_2 - 0.006 17.1 0.0 0.0069 17.0 0.0 1.0 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_81702_length_194_cov_1.685535_g73761_i0reverse_frame_2 - 0.064 13.6 0.0 8.5 6.8 0.0 2.1 1 1 0 2 2 2 0 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_81702_length_194_cov_1.685535_g73761_i0reverse_frame_2 - 0.14 12.8 0.1 8.5 7.1 0.0 2.0 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Antiterm PF03589.13 NODE_81700_length_194_cov_1.685535_g73759_i0reverse_frame_2 - 0.087 13.2 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Antitermination protein DDE_Tnp_1_3 PF13612.6 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_3 - 0.061 13.3 0.9 0.06 13.4 0.9 1.1 1 0 0 1 1 1 0 Transposase DDE domain Lebercilin PF15619.6 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.0027 17.4 0.7 0.0027 17.4 0.7 1.1 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF4164 PF13747.6 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.0091 16.3 2.5 0.065 13.5 1.2 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF4164) GreA_GreB_N PF03449.15 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.035 14.3 3.0 0.91 9.7 0.9 2.1 1 1 1 2 2 2 0 Transcription elongation factor, N-terminal GvpL_GvpF PF06386.11 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.037 13.9 0.2 0.047 13.6 0.2 1.1 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF MapZ_EC1 PF18041.1 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.057 13.7 0.1 0.065 13.5 0.1 1.1 1 0 0 1 1 1 0 MapZ extracellular domain 1 ZapB PF06005.12 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.064 13.7 2.6 0.094 13.2 2.6 1.3 1 1 0 1 1 1 0 Cell division protein ZapB PCRF PF03462.18 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.076 12.9 0.2 0.079 12.8 0.2 1.0 1 0 0 1 1 1 0 PCRF domain DUF4110 PF13422.6 NODE_81698_length_194_cov_1.691824_g73757_i0reverse_frame_2 - 0.091 12.8 0.4 0.099 12.7 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4110) DUF809 PF05663.11 NODE_81697_length_194_cov_1.691824_g73756_i0reverse_frame_2 - 0.058 13.5 0.7 0.056 13.6 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF809) TP1 PF02079.16 NODE_81692_length_194_cov_1.716981_g73751_i0reverse_frame_3 - 0.073 13.0 0.7 0.1 12.5 0.7 1.2 1 0 0 1 1 1 0 Nuclear transition protein 1 DUF5381 PF17353.2 NODE_81690_length_194_cov_1.735849_g73749_i0forward_frame_2 - 0.0069 16.2 0.1 0.0073 16.1 0.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5381) PhaP_Bmeg PF09602.10 NODE_81681_length_194_cov_1.786164_g73740_i0forward_frame_3 - 0.1 12.5 0.0 0.12 12.4 0.0 1.0 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) CPSase_C PF18302.1 NODE_81680_length_194_cov_1.798742_g73739_i0forward_frame_3 - 0.96 10.1 3.8 0.61 10.6 1.6 1.9 2 0 0 2 2 2 0 Carbamoyl phosphate synthetase C-terminal domain DUF1647 PF07801.11 NODE_81680_length_194_cov_1.798742_g73739_i0forward_frame_2 - 0.035 13.8 0.3 0.035 13.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1647) RNA_pol_Rpb2_7 PF04560.20 NODE_81680_length_194_cov_1.798742_g73739_i0forward_frame_2 - 0.063 13.7 0.4 0.073 13.5 0.4 1.1 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 7 TPR_22 PF18833.1 NODE_81679_length_194_cov_1.805031_g73738_i0forward_frame_3 - 0.02 15.0 0.1 0.021 14.9 0.1 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat Laminin_B PF00052.18 NODE_81678_length_194_cov_1.811321_g73737_i0forward_frame_3 - 0.13 12.1 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Laminin B (Domain IV) Alveol-reg_P311 PF11092.8 NODE_81678_length_194_cov_1.811321_g73737_i0forward_frame_2 - 0.14 12.3 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Neuronal protein 3.1 (p311) CDC48_N PF02359.18 NODE_81676_length_194_cov_1.823899_g73735_i0reverse_frame_2 - 0.044 14.0 0.1 0.047 13.9 0.1 1.0 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Topo-VIb_trans PF09239.11 NODE_81676_length_194_cov_1.823899_g73735_i0forward_frame_2 - 0.21 11.4 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Topoisomerase VI B subunit, transducer zinc_ribbon_15 PF17032.5 NODE_81672_length_194_cov_1.874214_g73731_i0forward_frame_3 - 0.02 15.6 0.3 0.025 15.3 0.3 1.1 1 0 0 1 1 1 0 zinc-ribbon family HicB PF05534.12 NODE_81669_length_194_cov_1.911950_g73728_i0forward_frame_2 - 0.17 11.7 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 HicB family Antimicrobial_8 PF08103.11 NODE_81662_length_194_cov_1.962264_g73721_i0reverse_frame_3 - 0.065 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Uperin family TraP PF07296.11 NODE_81662_length_194_cov_1.962264_g73721_i0reverse_frame_3 - 0.16 11.1 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 TraP protein zf-C2H2_11 PF16622.5 NODE_81660_length_194_cov_1.962264_g73719_i0forward_frame_3 - 0.17 11.6 0.9 0.17 11.6 0.9 2.4 3 0 0 3 3 3 0 zinc-finger C2H2-type Attacin_C PF03769.15 NODE_81657_length_194_cov_2.006289_g73716_i0reverse_frame_2 - 0.093 13.0 0.0 0.093 13.0 0.0 1.1 1 0 0 1 1 1 0 Attacin, C-terminal region RecT PF03837.14 NODE_81657_length_194_cov_2.006289_g73716_i0forward_frame_2 - 2.2e-08 33.9 0.0 2.2e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 RecT family RCC1_2 PF13540.6 NODE_81656_length_194_cov_2.006289_g73715_i0reverse_frame_2 - 0.12 12.2 0.9 0.12 12.2 0.9 1.8 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat RNase_H PF00075.24 NODE_81655_length_194_cov_2.012579_g73714_i0reverse_frame_2 - 0.019 15.2 0.1 0.02 15.1 0.1 1.1 1 0 0 1 1 1 0 RNase H WAP PF00095.21 NODE_81654_length_194_cov_2.012579_g73713_i0forward_frame_3 - 0.0012 19.2 2.1 0.0015 18.9 2.1 1.2 1 0 0 1 1 1 1 WAP-type (Whey Acidic Protein) 'four-disulfide core' SpvB PF03534.13 NODE_81653_length_194_cov_2.031447_g73712_i0reverse_frame_3 - 0.0098 15.1 0.9 0.0098 15.1 0.9 1.0 1 0 0 1 1 1 1 Salmonella virulence plasmid 65kDa B protein DUF2677 PF10838.8 NODE_81649_length_194_cov_2.075472_g73708_i0reverse_frame_2 - 0.092 12.7 0.1 0.092 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2677) UPF0220 PF05255.11 NODE_81647_length_194_cov_2.144654_g73706_i0forward_frame_3 - 0.0044 16.6 0.1 0.0044 16.6 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0220) DUF1345 PF07077.11 NODE_81647_length_194_cov_2.144654_g73706_i0forward_frame_2 - 0.019 14.7 0.9 0.019 14.7 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1345) DUF1065 PF06358.11 NODE_81647_length_194_cov_2.144654_g73706_i0forward_frame_2 - 0.056 13.4 0.1 0.059 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1065) CCG PF02754.16 NODE_81644_length_194_cov_2.169811_g73703_i0forward_frame_3 - 0.057 13.6 0.0 0.071 13.3 0.0 1.2 1 0 0 1 1 1 0 Cysteine-rich domain V4R PF02830.18 NODE_81644_length_194_cov_2.169811_g73703_i0forward_frame_3 - 0.07 13.2 0.0 0.68 10.0 0.0 2.0 2 0 0 2 2 2 0 V4R domain A2L_zn_ribbon PF08792.10 NODE_81642_length_194_cov_2.188679_g73701_i0reverse_frame_2 - 0.049 13.4 0.4 0.67 9.7 0.1 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain CTV_P6 PF06706.11 NODE_81642_length_194_cov_2.188679_g73701_i0forward_frame_3 - 0.09 12.5 1.2 0.11 12.2 1.2 1.2 1 0 0 1 1 1 0 Citrus tristeza virus 6-kDa protein DUF1929 PF09118.11 NODE_81641_length_194_cov_2.201258_g73700_i0reverse_frame_3 - 0.12 12.6 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1929) CPW_WPC PF09717.10 NODE_81640_length_194_cov_2.201258_g73699_i0forward_frame_2 - 0.078 14.0 0.0 0.1 13.6 0.0 1.2 1 0 0 1 1 1 0 Plasmodium falciparum domain of unknown function (CPW_WPC) TMCCDC2 PF15844.5 NODE_81636_length_194_cov_2.264151_g73695_i0reverse_frame_2 - 0.54 10.2 5.5 0.61 10.0 5.5 1.1 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 DUF4051 PF13260.6 NODE_81636_length_194_cov_2.264151_g73695_i0reverse_frame_2 - 1.8 8.3 8.3 0.13 12.0 3.2 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF4051) MSC PF09402.10 NODE_81636_length_194_cov_2.264151_g73695_i0reverse_frame_2 - 2.7 7.4 4.4 2.9 7.2 4.4 1.0 1 0 0 1 1 1 0 Man1-Src1p-C-terminal domain Pentapeptide_4 PF13599.6 NODE_81634_length_194_cov_2.270440_g73693_i0reverse_frame_3 - 4.7e-05 23.5 0.2 5.9e-05 23.1 0.2 1.1 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 NODE_81634_length_194_cov_2.270440_g73693_i0reverse_frame_3 - 0.04 14.1 0.1 0.13 12.5 0.1 1.8 1 1 0 1 1 1 0 Pentapeptide repeats (9 copies) Pentapeptide PF00805.22 NODE_81634_length_194_cov_2.270440_g73693_i0reverse_frame_3 - 0.046 13.4 0.0 0.16 11.6 0.0 1.8 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) CFEM PF05730.11 NODE_81632_length_194_cov_2.295597_g73691_i0reverse_frame_2 - 0.045 13.9 0.2 0.045 13.9 0.2 1.6 2 0 0 2 2 2 0 CFEM domain YIF1 PF03878.15 NODE_81631_length_194_cov_2.320755_g73690_i0reverse_frame_3 - 0.0042 16.6 0.5 0.005 16.4 0.5 1.2 1 1 0 1 1 1 1 YIF1 Glyphos_transf PF04464.14 NODE_81631_length_194_cov_2.320755_g73690_i0reverse_frame_3 - 0.025 13.6 0.0 0.027 13.5 0.0 1.0 1 0 0 1 1 1 0 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NADH-G_4Fe-4S_3 PF10588.9 NODE_81626_length_194_cov_2.421384_g73685_i0forward_frame_3 - 0.079 12.5 0.1 0.079 12.5 0.1 1.5 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AgrD PF05931.11 NODE_81624_length_194_cov_2.446541_g73683_i0forward_frame_3 - 0.027 14.5 0.1 0.033 14.2 0.1 1.2 1 0 0 1 1 1 0 Staphylococcal AgrD protein tRNA_Me_trans PF03054.16 NODE_81623_length_194_cov_2.446541_g73682_i0reverse_frame_2 - 0.19 10.5 0.3 0.2 10.4 0.3 1.1 1 0 0 1 1 1 0 tRNA methyl transferase zf-C2H2_7 PF15269.6 NODE_81617_length_194_cov_2.509434_g73676_i0forward_frame_2 - 0.016 15.3 0.2 0.021 14.9 0.2 1.2 1 0 0 1 1 1 0 Zinc-finger PriA_C PF18074.1 NODE_81617_length_194_cov_2.509434_g73676_i0forward_frame_2 - 0.08 13.8 0.0 0.08 13.8 0.0 1.1 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain Y2_Tnp PF04986.13 NODE_81615_length_194_cov_2.572327_g73674_i0reverse_frame_3 - 0.1 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Putative transposase MNNL PF07657.13 NODE_81613_length_194_cov_2.616352_g73672_i0forward_frame_2 - 0.039 14.0 1.5 0.047 13.7 1.5 1.2 1 0 0 1 1 1 0 N terminus of Notch ligand RepA1_leader PF08048.12 NODE_81610_length_194_cov_2.742138_g73669_i0reverse_frame_3 - 0.14 12.5 0.4 0.14 12.5 0.4 1.5 2 0 0 2 2 2 0 Tap RepA1 leader peptide HTH_Tnp_IS1 PF12759.7 NODE_81607_length_194_cov_2.805031_g73666_i0reverse_frame_3 - 0.022 14.4 1.0 1.5 8.5 0.1 2.8 2 1 0 2 2 2 0 InsA C-terminal domain FOP_dimer PF09398.10 NODE_81603_length_194_cov_2.937107_g73662_i0reverse_frame_3 - 0.025 14.8 0.1 0.031 14.5 0.1 1.2 1 1 0 1 1 1 0 FOP N terminal dimerisation domain ASFV_L11L PF05293.11 NODE_81599_length_194_cov_3.018868_g73658_i0reverse_frame_2 - 0.043 14.1 3.1 0.05 13.9 3.1 1.1 1 0 0 1 1 1 0 African swine fever virus (ASFV) L11L protein DUF4315 PF14193.6 NODE_81594_length_194_cov_3.402516_g73653_i0reverse_frame_2 - 0.007 16.3 0.2 0.0087 16.1 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4315) GhoS PF11080.8 NODE_81594_length_194_cov_3.402516_g73653_i0reverse_frame_2 - 0.01 15.8 0.1 0.011 15.7 0.1 1.1 1 0 0 1 1 1 0 Endoribonuclease GhoS Herpes_LMP1 PF05297.11 NODE_81594_length_194_cov_3.402516_g73653_i0forward_frame_2 - 0.52 9.5 4.3 0.57 9.3 4.3 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Rib PF08428.10 NODE_81593_length_194_cov_3.433962_g73652_i0reverse_frame_2 - 0.14 12.2 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Rib/alpha-like repeat Docking PF08990.11 NODE_81579_length_194_cov_5.345912_g73638_i0forward_frame_2 - 0.5 10.0 0.0 0.5 10.0 0.0 1.6 2 0 0 2 2 2 0 Erythronolide synthase docking DRE2_N PF16803.5 NODE_81578_length_194_cov_7.327044_g73637_i0reverse_frame_3 - 0.015 15.6 0.0 0.015 15.6 0.0 1.1 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus MS_channel PF00924.18 NODE_81577_length_194_cov_10.930818_g73636_i0forward_frame_2 - 0.44 10.0 0.8 0.54 9.8 0.8 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel Peptidase_C8 PF03569.13 NODE_81572_length_194_cov_21.081761_g73631_i0reverse_frame_2 - 0.022 14.3 0.1 0.023 14.3 0.1 1.0 1 0 0 1 1 1 0 Peptidase family C8 Mlo PF03094.15 NODE_81567_length_194_cov_22.754717_g73626_i0reverse_frame_3 - 0.72 8.2 3.5 0.75 8.1 3.5 1.0 1 0 0 1 1 1 0 Mlo family DUF4422 PF14393.6 NODE_81567_length_194_cov_22.754717_g73626_i0forward_frame_3 - 0.022 14.6 0.0 0.022 14.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4422) AA_permease PF00324.21 NODE_81565_length_194_cov_23.943396_g73624_i0reverse_frame_2 - 0.56 8.7 5.1 0.62 8.6 5.1 1.0 1 0 0 1 1 1 0 Amino acid permease DUF2828 PF11443.8 NODE_81562_length_194_cov_28.729560_g73621_i0reverse_frame_2 - 0.18 9.9 0.1 0.17 9.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) Methyltr_RsmF_N PF17125.5 NODE_81562_length_194_cov_28.729560_g73621_i0forward_frame_3 - 0.091 13.3 0.0 0.097 13.2 0.0 1.0 1 0 0 1 1 1 0 N-terminal domain of 16S rRNA methyltransferase RsmF RseC_MucC PF04246.12 NODE_81556_length_194_cov_32.578616_g73615_i0forward_frame_3 - 0.1 12.6 2.2 0.12 12.3 2.2 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC PMG PF05287.12 NODE_81554_length_194_cov_35.069182_g73613_i0forward_frame_2 - 0.0018 18.4 2.6 0.002 18.2 2.6 1.0 1 0 0 1 1 1 1 PMG protein Peptidase_M41 PF01434.18 NODE_81545_length_194_cov_41.880503_g73604_i0forward_frame_2 - 0.035 13.9 0.1 0.039 13.8 0.1 1.0 1 0 0 1 1 1 0 Peptidase family M41 DUF5314 PF17241.2 NODE_81545_length_194_cov_41.880503_g73604_i0forward_frame_2 - 0.042 13.5 0.0 0.042 13.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5314) Bin3 PF06859.12 NODE_81544_length_194_cov_42.333333_g73603_i0reverse_frame_2 - 0.061 14.0 0.1 0.067 13.8 0.1 1.0 1 0 0 1 1 1 0 Bicoid-interacting protein 3 (Bin3) zf-CCCH_3 PF15663.5 NODE_81540_length_194_cov_46.176101_g73599_i0reverse_frame_2 - 0.05 13.8 0.4 0.06 13.6 0.4 1.1 1 0 0 1 1 1 0 Zinc-finger containing family CblD PF07434.11 NODE_81540_length_194_cov_46.176101_g73599_i0forward_frame_3 - 0.032 13.2 0.1 0.033 13.2 0.1 1.0 1 0 0 1 1 1 0 CblD like pilus biogenesis initiator SspB PF04386.13 NODE_81537_length_194_cov_49.672956_g73596_i0reverse_frame_3 - 1.3 8.9 4.5 1.4 8.8 4.5 1.0 1 0 0 1 1 1 0 Stringent starvation protein B DUF5423 PF17461.2 NODE_81537_length_194_cov_49.672956_g73596_i0reverse_frame_3 - 6.7 5.5 12.2 44 2.8 12.7 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5423) OKR_DC_1_N PF03709.15 NODE_81535_length_194_cov_51.245283_g73594_i0reverse_frame_2 - 0.0072 16.6 0.1 0.0089 16.3 0.1 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, N-terminal domain KI67R PF08065.12 NODE_81528_length_194_cov_56.754717_g73587_i0forward_frame_3 - 0.0045 17.5 0.5 0.0053 17.3 0.5 1.1 1 0 0 1 1 1 1 KI67R (NUC007) repeat Peptidase_M57 PF12388.8 NODE_81528_length_194_cov_56.754717_g73587_i0forward_frame_3 - 0.086 12.4 0.2 0.098 12.2 0.2 1.0 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase VID27 PF08553.10 NODE_81521_length_194_cov_67.660377_g73580_i0reverse_frame_2 - 0.011 14.8 0.1 0.011 14.8 0.1 1.1 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain DUF2633 PF11119.8 NODE_81521_length_194_cov_67.660377_g73580_i0forward_frame_3 - 0.00098 19.0 0.0 0.00098 19.0 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2633) Smim3 PF17307.2 NODE_81511_length_194_cov_94.352201_g73570_i0reverse_frame_2 - 0.0072 15.8 1.0 0.008 15.7 1.0 1.1 1 0 0 1 1 1 1 Small integral membrane protein 3 BBS2_C PF14782.6 NODE_81511_length_194_cov_94.352201_g73570_i0forward_frame_3 - 0.00017 20.5 0.1 0.00022 20.2 0.1 1.1 1 0 0 1 1 1 1 Ciliary BBSome complex subunit 2, C-terminal TAS2R PF05296.13 NODE_81511_length_194_cov_94.352201_g73570_i0forward_frame_3 - 0.0088 15.2 0.1 0.0092 15.1 0.1 1.0 1 0 0 1 1 1 1 Taste receptor protein (TAS2R) zf-P11 PF03854.14 NODE_81509_length_194_cov_95.427673_g73568_i0reverse_frame_3 - 0.064 12.9 0.1 0.079 12.6 0.1 1.2 1 0 0 1 1 1 0 P-11 zinc finger Toxin_31 PF08119.11 NODE_81509_length_194_cov_95.427673_g73568_i0forward_frame_3 - 0.034 13.9 0.3 0.067 13.0 0.3 1.5 1 0 0 1 1 1 0 Scorpion acidic alpha-KTx toxin family zf_PR_Knuckle PF18445.1 NODE_81508_length_194_cov_96.968553_g73567_i0forward_frame_3 - 0.78 9.6 3.1 1.1 9.1 3.1 1.4 1 0 0 1 1 1 0 PR zinc knuckle motif Pex2_Pex12 PF04757.14 NODE_81501_length_194_cov_127.522013_g73560_i0reverse_frame_2 - 0.016 14.8 0.1 0.017 14.7 0.1 1.0 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region DUF2759 PF10958.8 NODE_81501_length_194_cov_127.522013_g73560_i0forward_frame_2 - 0.092 12.5 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) DUP PF00674.18 NODE_81495_length_194_cov_168.886792_g73554_i0forward_frame_3 - 0.033 14.3 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 DUP family MTCP1 PF08991.10 NODE_81492_length_194_cov_227.566038_g73551_i0reverse_frame_3 - 0.031 14.5 0.7 0.039 14.2 0.7 1.1 1 0 0 1 1 1 0 Mature-T-Cell Proliferation I type zf-RAG1 PF10426.9 NODE_81487_length_194_cov_358.006289_g73546_i0reverse_frame_2 - 0.18 12.0 1.5 0.3 11.3 1.5 1.4 1 0 0 1 1 1 0 Recombination-activating protein 1 zinc-finger domain PE_PPE_C PF12484.8 NODE_81485_length_194_cov_455.056604_g73544_i0reverse_frame_2 - 0.0096 16.8 0.2 0.013 16.4 0.2 1.1 1 0 0 1 1 1 1 Polymorphic PE/PPE proteins C terminal Ost5 PF05251.12 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_3 - 0.57 10.5 5.4 10 6.5 2.2 2.0 1 1 1 2 2 2 0 Oligosaccharyltransferase subunit 5 EpsG PF14897.6 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_3 - 0.66 9.2 9.0 0.85 8.9 9.0 1.2 1 0 0 1 1 1 0 EpsG family YajC PF02699.15 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_2 - 0.31 11.0 11.8 1.9 8.4 3.5 2.1 2 0 0 2 2 2 0 Preprotein translocase subunit SelK_SelG PF10961.8 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_2 - 1.7 9.3 4.8 2.3 8.9 0.0 2.0 1 1 1 2 2 2 0 Selenoprotein SelK_SelG OAD_gamma PF04277.13 NODE_81484_length_194_cov_1173.496855_g73543_i0reverse_frame_2 - 7.3 7.3 6.6 11 6.6 0.5 2.0 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Response_reg PF00072.24 NODE_81475_length_195_cov_0.912500_g73534_i0reverse_frame_3 - 8.2e-12 45.3 0.0 9.3e-12 45.1 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain UPF0220 PF05255.11 NODE_81474_length_195_cov_0.912500_g73533_i0forward_frame_3 - 0.013 15.1 0.0 0.016 14.8 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) LtrA PF06772.11 NODE_81474_length_195_cov_0.912500_g73533_i0forward_frame_2 - 0.058 12.6 0.3 0.058 12.6 0.3 1.0 1 0 0 1 1 1 0 Bacterial low temperature requirement A protein (LtrA) DUF2781 PF10914.8 NODE_81473_length_195_cov_0.918750_g73532_i0reverse_frame_2 - 0.11 12.9 0.0 0.13 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2781) EF-hand_1 PF00036.32 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.00082 18.8 0.4 0.0021 17.5 0.1 1.8 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.006 16.4 0.1 0.011 15.5 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.023 14.2 0.1 0.042 13.4 0.1 1.5 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.052 13.5 0.1 0.073 13.0 0.1 1.5 1 1 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 NODE_81471_length_195_cov_0.937500_g73530_i0forward_frame_2 - 0.053 14.0 0.3 0.11 13.0 0.1 1.5 1 1 0 1 1 1 0 EF-hand domain pair DUF4597 PF15366.6 NODE_81469_length_195_cov_0.943750_g73528_i0forward_frame_2 - 0.13 12.1 1.9 0.15 11.8 1.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4597) Herpes_capsid PF06112.11 NODE_81463_length_195_cov_0.987500_g73522_i0forward_frame_2 - 0.35 10.9 1.8 0.36 10.9 1.8 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein Orai-1 PF07856.12 NODE_81459_length_195_cov_0.987500_g73518_i0reverse_frame_3 - 0.019 14.6 0.1 0.021 14.5 0.1 1.0 1 0 0 1 1 1 0 Mediator of CRAC channel activity TRAM1 PF08390.11 NODE_81453_length_195_cov_0.993750_g73512_i0forward_frame_2 - 0.059 13.0 0.1 0.081 12.6 0.1 1.2 1 0 0 1 1 1 0 TRAM1-like protein Toxin_12 PF07740.12 NODE_81452_length_195_cov_0.993750_g73511_i0reverse_frame_2 - 0.037 14.7 3.6 0.058 14.1 3.6 1.3 1 0 0 1 1 1 0 Ion channel inhibitory toxin PLAC PF08686.11 NODE_81451_length_195_cov_0.993750_g73510_i0forward_frame_3 - 0.062 14.1 4.5 0.53 11.1 0.7 2.2 2 0 0 2 2 2 0 PLAC (protease and lacunin) domain gpUL132 PF11359.8 NODE_81450_length_195_cov_0.993750_g73509_i0reverse_frame_2 - 0.2 11.2 0.3 0.2 11.2 0.3 1.0 1 0 0 1 1 1 0 Glycoprotein UL132 TPR_2 PF07719.17 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 3.9e-06 26.6 1.0 0.00019 21.3 0.4 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 6.6e-06 25.7 0.2 0.0007 19.3 0.2 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 3.6e-05 23.8 0.1 7.8e-05 22.8 0.0 1.6 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 8.3e-05 23.2 0.9 0.0001 22.8 0.9 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.00024 21.1 0.9 0.0018 18.4 0.2 2.2 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.00027 20.5 0.4 0.025 14.3 0.0 2.1 1 1 1 2 2 2 2 TPR repeat TPR_12 PF13424.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.00028 21.1 1.1 0.00042 20.6 1.2 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.00097 19.6 0.1 0.0016 18.9 0.1 1.4 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.001 19.7 1.1 0.3 12.0 0.3 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.0018 18.7 2.8 0.0029 18.1 0.2 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.0021 17.9 0.7 0.048 13.7 0.5 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat HemY_N PF07219.13 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.016 15.4 0.0 0.023 14.9 0.0 1.2 1 0 0 1 1 1 0 HemY protein N-terminus TPR_20 PF14561.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.018 15.4 0.1 0.19 12.1 0.0 1.9 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.03 14.2 0.6 0.084 12.8 0.2 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.031 14.5 0.1 0.038 14.2 0.1 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 PaREP1 PF05942.11 NODE_81449_length_195_cov_0.993750_g73508_i0reverse_frame_2 - 0.077 12.9 0.9 1.4 8.8 0.0 2.0 2 0 0 2 2 2 0 Archaeal PaREP1/PaREP8 family CRPA PF05745.11 NODE_81445_length_195_cov_0.993750_g73504_i0forward_frame_3 - 0.0099 15.9 0.5 0.01 15.9 0.5 1.1 1 0 0 1 1 1 1 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) U83 PF17465.2 NODE_81445_length_195_cov_0.993750_g73504_i0forward_frame_3 - 0.13 12.4 0.4 0.14 12.3 0.4 1.2 1 0 0 1 1 1 0 Chemokine-like protein, HHV-6 U83 gene product PGF-CTERM PF18204.1 NODE_81442_length_195_cov_1.000000_g73501_i0reverse_frame_2 - 0.95 9.5 4.6 1.5 8.9 4.6 1.4 1 0 0 1 1 1 0 PGF-CTERM motif DUF5474 PF17568.2 NODE_81442_length_195_cov_1.000000_g73501_i0forward_frame_2 - 0.14 12.2 0.1 0.17 12.0 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5474) DUF5053 PF16476.5 NODE_81441_length_195_cov_1.000000_g73500_i0reverse_frame_2 - 0.063 12.9 0.0 0.098 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5053) STE PF02200.16 NODE_81435_length_195_cov_1.000000_g73494_i0reverse_frame_2 - 0.029 14.8 0.3 0.037 14.4 0.3 1.1 1 0 0 1 1 1 0 STE like transcription factor Prion_bPrPp PF11587.8 NODE_81434_length_195_cov_1.000000_g73493_i0forward_frame_3 - 0.048 13.5 0.0 0.075 12.9 0.0 1.3 1 0 0 1 1 1 0 Major prion protein bPrPp - N terminal Peptidase_C2 PF00648.21 NODE_81429_length_195_cov_1.000000_g73488_i0reverse_frame_3 - 0.0054 15.8 0.6 0.0061 15.6 0.6 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease E7 PF00527.18 NODE_81426_length_195_cov_1.000000_g73485_i0forward_frame_3 - 0.16 12.2 0.5 0.18 12.0 0.5 1.0 1 0 0 1 1 1 0 E7 protein, Early protein EamA PF00892.20 NODE_81420_length_195_cov_1.000000_g73479_i0forward_frame_3 - 1.6e-06 28.3 2.7 1.7e-06 28.2 2.7 1.0 1 0 0 1 1 1 1 EamA-like transporter family DUF1011 PF06237.12 NODE_81420_length_195_cov_1.000000_g73479_i0forward_frame_3 - 0.016 15.5 0.2 0.018 15.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1011) DUF4116 PF13475.6 NODE_81416_length_195_cov_1.000000_g73475_i0forward_frame_2 - 0.13 12.0 0.3 0.18 11.6 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) LRR_6 PF13516.6 NODE_81415_length_195_cov_1.000000_g73474_i0reverse_frame_2 - 6.2e-07 29.0 0.0 0.0049 16.8 0.0 2.2 2 0 0 2 2 2 2 Leucine Rich repeat LRR_8 PF13855.6 NODE_81415_length_195_cov_1.000000_g73474_i0reverse_frame_2 - 0.017 14.9 0.3 0.15 11.9 0.3 2.0 1 1 0 1 1 1 0 Leucine rich repeat LRR_1 PF00560.33 NODE_81415_length_195_cov_1.000000_g73474_i0reverse_frame_2 - 0.023 15.2 0.2 0.99 10.2 0.1 2.2 2 0 0 2 2 2 0 Leucine Rich Repeat LRR_4 PF12799.7 NODE_81415_length_195_cov_1.000000_g73474_i0reverse_frame_2 - 0.028 14.8 0.4 0.11 12.9 0.3 1.8 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) RhoGEF67_u2 PF16614.5 NODE_81411_length_195_cov_1.000000_g73470_i0reverse_frame_2 - 0.062 13.4 0.0 0.073 13.1 0.0 1.1 1 0 0 1 1 1 0 Unstructured region two on RhoGEF 6 and 7 Clr2_transil PF16761.5 NODE_81410_length_195_cov_1.000000_g73469_i0forward_frame_2 - 0.02 15.7 0.2 0.039 14.8 0.2 1.5 1 0 0 1 1 1 0 Transcription-silencing protein, cryptic loci regulator Clr2 DUF2887 PF11103.8 NODE_81405_length_195_cov_1.000000_g73464_i0forward_frame_3 - 0.048 13.7 0.1 0.056 13.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2887) TonB_N PF16031.5 NODE_81398_length_195_cov_1.000000_g73457_i0reverse_frame_2 - 0.0072 16.8 2.9 0.0081 16.7 2.9 1.1 1 0 0 1 1 1 1 TonB polyproline region Phage_B PF02304.15 NODE_81398_length_195_cov_1.000000_g73457_i0reverse_frame_2 - 0.21 12.0 0.0 0.25 11.7 0.0 1.1 1 0 0 1 1 1 0 Scaffold protein B zf-RING_4 PF14570.6 NODE_81391_length_195_cov_1.000000_g73450_i0forward_frame_2 - 0.001 18.8 0.3 0.0012 18.6 0.3 1.1 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain DUF865 PF05906.11 NODE_81390_length_195_cov_1.000000_g73449_i0reverse_frame_2 - 0.39 10.5 0.3 0.39 10.5 0.3 2.1 2 1 0 2 2 2 0 Herpesvirus-7 repeat of unknown function (DUF865) SRR1 PF07985.12 NODE_81388_length_195_cov_1.000000_g73447_i0reverse_frame_3 - 0.1 12.7 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 SRR1 SCIFF PF13165.6 NODE_81388_length_195_cov_1.000000_g73447_i0reverse_frame_2 - 0.56 10.2 5.7 2.4 8.1 0.0 2.2 2 0 0 2 2 2 0 Six-cysteine peptide SCIFF Med24_N PF11277.8 NODE_81387_length_195_cov_1.000000_g73446_i0reverse_frame_3 - 0.073 11.1 0.5 0.081 11.0 0.5 1.0 1 0 0 1 1 1 0 Mediator complex subunit 24 N-terminal DUF2852 PF11014.8 NODE_81387_length_195_cov_1.000000_g73446_i0forward_frame_3 - 0.034 14.3 0.0 0.04 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2852) Bd3614_N PF14442.6 NODE_81386_length_195_cov_1.000000_g73445_i0reverse_frame_3 - 0.17 12.2 0.0 0.19 12.0 0.0 1.0 1 0 0 1 1 1 0 Bd3614-like deaminase N-terminal TP2 PF01254.18 NODE_81382_length_195_cov_1.000000_g73441_i0forward_frame_2 - 0.013 16.1 7.6 0.016 15.8 7.6 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks427.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks427.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks427.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks427.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:35:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2389 PF09493.10 NODE_81372_length_195_cov_1.062500_g73431_i0reverse_frame_3 - 0.12 13.0 0.2 0.14 12.8 0.2 1.2 1 0 0 1 1 1 0 Tryptophan-rich protein (DUF2389) Flu_C_NS1 PF03506.13 NODE_81371_length_195_cov_1.081250_g73430_i0forward_frame_3 - 0.16 11.9 0.8 0.33 10.9 0.2 1.6 1 1 1 2 2 2 0 Influenza C non-structural protein (NS1) Mei5 PF10376.9 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 2.6e-05 24.2 3.7 2.6e-05 24.2 3.7 1.0 1 0 0 1 1 1 1 Double-strand recombination repair protein DUF1664 PF07889.12 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.00025 21.1 2.6 0.00026 21.0 2.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Phage_Mu_Gam PF07352.12 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.0041 17.0 1.0 0.0045 16.9 1.0 1.0 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein COG2 PF06148.11 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.0091 16.1 2.0 0.01 15.9 2.0 1.1 1 0 0 1 1 1 1 COG (conserved oligomeric Golgi) complex component, COG2 DUF5315 PF17242.2 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.011 15.6 0.2 0.012 15.4 0.2 1.1 1 0 0 1 1 1 0 Disordered region of unknown function (DUF5315) OmpH PF03938.14 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.011 16.1 2.6 0.011 16.0 2.6 1.0 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) KELK PF15796.5 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.04 14.4 5.7 0.18 12.3 5.7 1.8 1 1 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase IFT57 PF10498.9 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.099 11.6 5.3 0.1 11.5 5.3 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Fzo_mitofusin PF04799.13 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 0.1 12.1 2.3 0.096 12.2 1.6 1.3 1 1 0 1 1 1 0 fzo-like conserved region TMPIT PF07851.13 NODE_81369_length_195_cov_1.106250_g73428_i0forward_frame_3 - 1.1 8.4 3.3 1.1 8.4 3.3 1.0 1 0 0 1 1 1 0 TMPIT-like protein zinc_ribbon_9 PF14369.6 NODE_81368_length_195_cov_1.106250_g73427_i0forward_frame_2 - 0.023 15.0 1.2 0.042 14.1 1.2 1.4 1 0 0 1 1 1 0 zinc-ribbon Arginosuc_synth PF00764.19 NODE_81366_length_195_cov_1.112500_g73425_i0reverse_frame_3 - 1e-15 58.0 0.9 1.1e-15 57.9 0.9 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase Regulator_TrmB PF11495.8 NODE_81366_length_195_cov_1.112500_g73425_i0reverse_frame_2 - 0.17 11.0 0.1 0.18 10.9 0.1 1.0 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB SLATT_6 PF18169.1 NODE_81366_length_195_cov_1.112500_g73425_i0forward_frame_3 - 0.026 14.2 0.3 0.026 14.2 0.3 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 Glyco_hydro_28 PF00295.17 NODE_81364_length_195_cov_1.118750_g73423_i0forward_frame_3 - 0.017 14.2 0.8 0.019 14.0 0.8 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 28 DUF3557 PF12078.8 NODE_81364_length_195_cov_1.118750_g73423_i0forward_frame_3 - 0.022 14.7 0.8 0.026 14.5 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3557) CLLAC PF15675.5 NODE_81362_length_195_cov_1.131250_g73421_i0reverse_frame_3 - 3 7.5 8.2 5 6.8 8.2 1.3 1 0 0 1 1 1 0 CLLAC-motif containing domain PKS_DE PF18369.1 NODE_81359_length_195_cov_1.150000_g73418_i0forward_frame_3 - 0.083 13.5 0.5 0.12 12.9 0.5 1.3 1 0 0 1 1 1 0 Polyketide synthase dimerisation element domain DUF4923 PF16270.5 NODE_81354_length_195_cov_1.175000_g73413_i0forward_frame_3 - 0.026 14.4 0.0 0.026 14.4 0.0 1.1 1 0 0 1 1 1 0 Lipocalin-like domain (DUF4923) Complex1_LYR PF05347.15 NODE_81350_length_195_cov_1.187500_g73409_i0forward_frame_3 - 0.099 12.7 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Complex 1 protein (LYR family) Acyl-CoA_ox_N PF14749.6 NODE_81349_length_195_cov_1.187500_g73408_i0forward_frame_3 - 3.3e-06 27.7 0.0 3.6e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal Acyl-CoA_dh_N PF02771.16 NODE_81349_length_195_cov_1.187500_g73408_i0forward_frame_3 - 0.025 15.2 0.0 0.028 15.1 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, N-terminal domain MIOX PF05153.15 NODE_81344_length_195_cov_1.212500_g73403_i0reverse_frame_3 - 1.5e-17 64.0 0.2 1.5e-17 64.0 0.2 1.0 1 0 0 1 1 1 1 Myo-inositol oxygenase Fer2_2 PF01799.20 NODE_81340_length_195_cov_1.237500_g73399_i0forward_frame_2 - 0.11 12.6 0.3 0.11 12.6 0.3 1.4 2 0 0 2 2 2 0 [2Fe-2S] binding domain Baculo_helicase PF04735.12 NODE_81338_length_195_cov_1.237500_g73397_i0reverse_frame_3 - 0.006 14.2 0.4 0.006 14.2 0.4 1.0 1 0 0 1 1 1 1 Baculovirus DNA helicase DUF3679 PF12438.8 NODE_81337_length_195_cov_1.243750_g73396_i0reverse_frame_3 - 0.99 9.1 0.1 0.99 9.1 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3679) CemA PF03040.14 NODE_81335_length_195_cov_1.243750_g73394_i0forward_frame_3 - 0.035 14.0 0.2 0.038 13.9 0.2 1.0 1 0 0 1 1 1 0 CemA family PET117 PF15786.5 NODE_81335_length_195_cov_1.243750_g73394_i0forward_frame_3 - 0.05 13.9 0.0 0.06 13.6 0.0 1.1 1 0 0 1 1 1 0 PET assembly of cytochrome c oxidase, mitochondrial CEP1-DNA_bind PF09287.10 NODE_81335_length_195_cov_1.243750_g73394_i0forward_frame_3 - 0.054 13.1 0.2 0.062 12.9 0.2 1.0 1 0 0 1 1 1 0 CEP-1, DNA binding Luciferase_cat PF10285.9 NODE_81332_length_195_cov_1.250000_g73391_i0reverse_frame_2 - 8.1 5.7 6.3 1.6 8.1 0.4 1.9 1 1 1 2 2 2 0 Luciferase catalytic domain GBP_repeat PF02526.14 NODE_81329_length_195_cov_1.250000_g73388_i0forward_frame_2 - 0.11 12.2 0.3 0.15 11.8 0.3 1.2 1 0 0 1 1 1 0 Glycophorin-binding protein Scaffolding_pro PF11418.8 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.0084 16.6 1.3 0.01 16.4 1.3 1.2 1 0 0 1 1 1 1 Phi29 scaffolding protein CENP-H PF05837.12 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.0096 16.3 5.7 0.01 16.2 5.7 1.0 1 0 0 1 1 1 1 Centromere protein H (CENP-H) DivIVA PF05103.13 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.014 15.5 6.4 0.014 15.5 6.4 1.3 1 1 0 1 1 1 0 DivIVA protein TolA_bind_tri PF16331.5 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.017 15.2 8.8 0.019 15.0 8.8 1.1 1 0 0 1 1 1 0 TolA binding protein trimerisation Imm5 PF14423.6 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.13 12.5 2.6 0.15 12.3 2.6 1.0 1 0 0 1 1 1 0 Immunity protein Imm5 FapA PF03961.13 NODE_81327_length_195_cov_1.250000_g73386_i0forward_frame_2 - 0.58 8.7 7.9 0.62 8.6 7.9 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A HTH_psq PF05225.16 NODE_81326_length_195_cov_1.262500_g73385_i0forward_frame_3 - 0.044 13.5 0.0 0.075 12.8 0.0 1.3 1 0 0 1 1 1 0 helix-turn-helix, Psq domain BCIP PF13862.6 NODE_81321_length_195_cov_1.287500_g73380_i0forward_frame_2 - 0.0036 17.1 0.1 0.0038 17.0 0.1 1.0 1 0 0 1 1 1 1 p21-C-terminal region-binding protein Fijivirus_P9-2 PF06837.11 NODE_81320_length_195_cov_1.293750_g73379_i0forward_frame_3 - 1.5 8.2 8.6 1.7 8.1 8.6 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein PAP1 PF08601.10 NODE_81319_length_195_cov_1.300000_g73378_i0forward_frame_3 - 0.03 14.1 1.0 0.031 14.0 1.0 1.0 1 0 0 1 1 1 0 Transcription factor PAP1 Phage_BR0599 PF09356.10 NODE_81319_length_195_cov_1.300000_g73378_i0forward_frame_3 - 0.063 13.6 0.1 0.063 13.6 0.1 1.4 1 1 0 1 1 1 0 Phage conserved hypothetical protein BR0599 DUF473 PF04322.12 NODE_81314_length_195_cov_1.331250_g73373_i0forward_frame_3 - 0.033 14.0 0.1 0.036 13.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF473) Synaptobrevin PF00957.21 NODE_81312_length_195_cov_1.343750_g73371_i0forward_frame_3 - 0.66 9.8 2.3 0.95 9.3 2.3 1.3 1 0 0 1 1 1 0 Synaptobrevin EVI2A PF05399.11 NODE_81312_length_195_cov_1.343750_g73371_i0forward_frame_3 - 1.3 8.5 5.1 1.6 8.2 5.1 1.0 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) GST_C PF00043.25 NODE_81311_length_195_cov_1.343750_g73370_i0forward_frame_2 - 0.066 13.4 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 NODE_81311_length_195_cov_1.343750_g73370_i0forward_frame_2 - 0.13 12.5 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain PHTB1_N PF14727.6 NODE_81310_length_195_cov_1.350000_g73369_i0forward_frame_3 - 0.11 11.8 1.2 0.13 11.6 1.2 1.0 1 0 0 1 1 1 0 PTHB1 N-terminus GRAM PF02893.20 NODE_81303_length_195_cov_1.375000_g73362_i0reverse_frame_3 - 0.051 13.5 0.0 0.051 13.5 0.0 1.1 1 0 0 1 1 1 0 GRAM domain Sulfakinin PF08257.11 NODE_81299_length_195_cov_1.412500_g73358_i0reverse_frame_2 - 0.021 14.7 3.1 5 7.5 0.2 2.5 2 0 0 2 2 2 0 Sulfakinin family MRP-S33 PF08293.11 NODE_81295_length_195_cov_1.425000_g73354_i0reverse_frame_2 - 0.015 15.5 0.1 0.018 15.3 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit S27 Ribosomal_S5_C PF03719.15 NODE_81290_length_195_cov_1.437500_g73349_i0forward_frame_2 - 0.046 13.2 0.0 0.061 12.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S5, C-terminal domain DUF4322 PF14210.6 NODE_81284_length_195_cov_1.462500_g73343_i0reverse_frame_3 - 0.037 13.9 0.0 0.045 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4322) DUF1265 PF06887.14 NODE_81283_length_195_cov_1.462500_g73342_i0reverse_frame_2 - 0.053 13.5 0.1 0.053 13.5 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1265) VraX PF17412.2 NODE_81282_length_195_cov_1.462500_g73341_i0reverse_frame_3 - 0.064 12.9 0.0 0.095 12.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function XPC-binding PF09280.11 NODE_81282_length_195_cov_1.462500_g73341_i0forward_frame_2 - 6.6e-10 38.6 2.5 6.6e-10 38.6 2.5 1.4 2 0 0 2 2 2 1 XPC-binding domain Toxin_34 PF08396.10 NODE_81278_length_195_cov_1.468750_g73337_i0reverse_frame_2 - 0.0034 18.1 2.1 0.0036 18.0 2.1 1.1 1 0 0 1 1 1 1 Spider toxin omega agatoxin/Tx1 family Adeno_E3_CR1 PF02440.15 NODE_81272_length_195_cov_1.487500_g73331_i0forward_frame_2 - 0.026 14.3 0.1 0.029 14.2 0.1 1.1 1 0 0 1 1 1 0 Adenovirus E3 region protein CR1 Ten_N PF06484.12 NODE_81268_length_195_cov_1.493750_g73327_i0reverse_frame_2 - 0.019 14.9 0.5 0.022 14.7 0.5 1.1 1 0 0 1 1 1 0 Teneurin Intracellular Region ARL17 PF15840.5 NODE_81268_length_195_cov_1.493750_g73327_i0forward_frame_3 - 0.24 11.8 7.1 0.072 13.5 3.1 2.1 1 1 0 2 2 2 0 ADP-ribosylation factor-like protein 17 Rhomboid_N PF12122.8 NODE_81268_length_195_cov_1.493750_g73327_i0forward_frame_2 - 0.023 14.9 0.0 0.025 14.7 0.0 1.1 1 0 0 1 1 1 0 Cytoplasmic N-terminal domain of rhomboid serine protease ZipA_C PF04354.13 NODE_81267_length_195_cov_1.493750_g73326_i0reverse_frame_2 - 0.15 11.9 0.0 0.17 11.7 0.0 1.0 1 0 0 1 1 1 0 ZipA, C-terminal FtsZ-binding domain m_DGTX_Dc1a_b_c PF17491.2 NODE_81267_length_195_cov_1.493750_g73326_i0forward_frame_2 - 0.13 12.9 4.1 0.06 14.0 2.4 1.5 1 1 1 2 2 2 0 Spider Toxins mu-diguetoxin-1 a, b and c DUF1819 PF08849.11 NODE_81265_length_195_cov_1.493750_g73324_i0forward_frame_2 - 0.045 13.6 0.0 0.052 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative inner membrane protein (DUF1819) CCAP PF11105.8 NODE_81261_length_195_cov_1.500000_g73320_i0reverse_frame_2 - 0.082 12.9 1.0 0.091 12.7 0.5 1.3 1 1 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a Pex24p PF06398.11 NODE_81259_length_195_cov_1.500000_g73318_i0reverse_frame_3 - 0.63 9.0 5.0 0.66 8.9 5.0 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF334 PF03904.13 NODE_81258_length_195_cov_1.500000_g73317_i0forward_frame_3 - 0.067 12.7 0.6 0.073 12.6 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) Fur_reg_FbpB PF13040.6 NODE_81258_length_195_cov_1.500000_g73317_i0forward_frame_3 - 0.086 12.4 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Fur-regulated basic protein B CLU_N PF15044.6 NODE_81255_length_195_cov_1.500000_g73314_i0forward_frame_2 - 0.025 15.0 0.3 0.032 14.6 0.3 1.2 1 0 0 1 1 1 0 Mitochondrial function, CLU-N-term Transp_inhibit PF18791.1 NODE_81252_length_195_cov_1.500000_g73311_i0reverse_frame_3 - 0.012 15.1 0.1 0.026 14.0 0.0 1.6 2 0 0 2 2 2 0 Transport inhibitor response 1 protein domain V_ATPase_I PF01496.19 NODE_81249_length_195_cov_1.500000_g73308_i0reverse_frame_2 - 0.00066 17.7 0.0 0.00067 17.7 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family LSM PF01423.22 NODE_81248_length_195_cov_1.500000_g73307_i0reverse_frame_2 - 0.042 13.6 0.0 0.16 11.7 0.0 1.8 1 1 1 2 2 2 0 LSM domain Fijivirus_P9-2 PF06837.11 NODE_81245_length_195_cov_1.506250_g73304_i0forward_frame_3 - 1.1 8.7 8.9 1.2 8.5 8.9 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein zf-Paramyx-P PF13008.7 NODE_81226_length_195_cov_1.593750_g73285_i0forward_frame_2 - 0.021 14.3 3.5 0.04 13.4 3.5 1.5 1 0 0 1 1 1 0 Zinc-binding domain of Paramyxoviridae V protein DUF2514 PF10721.9 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_3 - 0.023 14.7 2.6 0.024 14.6 2.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2514) DUF3915 PF13054.6 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_3 - 0.2 11.7 3.0 0.2 11.6 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) OATP PF03137.20 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_3 - 1.2 7.3 2.3 1.3 7.3 2.3 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Presenilin PF01080.17 NODE_81224_length_195_cov_1.643750_g73283_i0reverse_frame_3 - 4.7 5.9 4.5 5.1 5.7 4.5 1.0 1 0 0 1 1 1 0 Presenilin SUR7 PF06687.12 NODE_81222_length_195_cov_1.643750_g73281_i0reverse_frame_3 - 0.0086 15.7 1.0 0.0092 15.6 1.0 1.0 1 0 0 1 1 1 1 SUR7/PalI family DUF5118 PF17162.4 NODE_81218_length_195_cov_1.662500_g73277_i0forward_frame_3 - 0.096 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5118) Rz1 PF06085.11 NODE_81215_length_195_cov_1.693750_g73274_i0forward_frame_2 - 0.053 13.3 0.9 0.072 12.9 0.9 1.3 1 0 0 1 1 1 0 Lipoprotein Rz1 precursor Ribosomal_L37e PF01907.19 NODE_81213_length_195_cov_1.718750_g73272_i0reverse_frame_2 - 0.051 13.7 1.6 0.063 13.4 1.4 1.4 1 1 0 1 1 1 0 Ribosomal protein L37e EB PF01683.18 NODE_81212_length_195_cov_1.737500_g73271_i0reverse_frame_2 - 0.057 13.7 5.7 0.066 13.5 5.7 1.2 1 0 0 1 1 1 0 EB module CAP-ZIP_m PF15255.6 NODE_81208_length_195_cov_1.750000_g73267_i0reverse_frame_2 - 0.29 11.4 3.3 6.9 6.9 0.3 2.0 2 0 0 2 2 2 0 WASH complex subunit CAP-Z interacting, central region DUF1554 PF07588.11 NODE_81201_length_195_cov_1.781250_g73260_i0reverse_frame_2 - 0.0063 16.3 0.3 0.0063 16.3 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1554) DUF2963 PF11178.8 NODE_81198_length_195_cov_1.818750_g73257_i0reverse_frame_3 - 0.18 11.6 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) Albumin_I PF08027.11 NODE_81196_length_195_cov_1.825000_g73255_i0reverse_frame_3 - 0.036 13.7 1.0 0.061 12.9 1.0 1.4 1 0 0 1 1 1 0 Albumin I chain b DUF3985 PF13153.6 NODE_81194_length_195_cov_1.843750_g73253_i0reverse_frame_3 - 0.0047 16.9 0.7 0.006 16.6 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3985) PRMT5_C PF17286.2 NODE_81193_length_195_cov_1.868750_g73252_i0forward_frame_3 - 0.076 12.9 0.0 0.08 12.8 0.0 1.1 1 0 0 1 1 1 0 PRMT5 oligomerisation domain RepA1_leader PF08048.12 NODE_81192_length_195_cov_1.868750_g73251_i0reverse_frame_3 - 0.049 13.9 2.1 0.076 13.3 2.1 1.4 1 0 0 1 1 1 0 Tap RepA1 leader peptide LepA_C PF06421.12 NODE_81191_length_195_cov_1.868750_g73250_i0reverse_frame_2 - 1.4e-22 79.8 0.1 1.6e-22 79.7 0.1 1.0 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus CompInhib_SCIN PF11546.8 NODE_81191_length_195_cov_1.868750_g73250_i0reverse_frame_2 - 0.061 13.4 0.0 0.066 13.3 0.0 1.2 1 0 0 1 1 1 0 Staphylococcal complement inhibitor SCIN ALF PF03752.13 NODE_81189_length_195_cov_1.875000_g73248_i0forward_frame_2 - 0.077 13.0 0.0 0.099 12.6 0.0 1.1 1 0 0 1 1 1 0 Short repeats of unknown function TPR_14 PF13428.6 NODE_81188_length_195_cov_1.875000_g73247_i0reverse_frame_3 - 0.0018 19.0 0.0 0.0023 18.6 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat Herpes_LMP1 PF05297.11 NODE_81183_length_195_cov_1.900000_g73242_i0forward_frame_2 - 1.1 8.4 3.2 1.1 8.3 3.2 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) IGF2_C PF08365.11 NODE_81180_length_195_cov_1.918750_g73239_i0reverse_frame_3 - 0.015 15.3 0.1 0.016 15.2 0.1 1.2 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide Tox-PLDMTX PF15645.6 NODE_81179_length_195_cov_1.925000_g73238_i0reverse_frame_2 - 0.1 12.9 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Dermonecrotoxin of the Papain-like fold IMUP PF15761.5 NODE_81177_length_195_cov_1.931250_g73236_i0forward_frame_3 - 0.3 11.8 12.8 0.36 11.5 12.8 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_81177_length_195_cov_1.931250_g73236_i0forward_frame_3 - 0.41 10.2 12.5 0.45 10.1 12.5 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF561 PF04481.12 NODE_81176_length_195_cov_1.931250_g73235_i0reverse_frame_3 - 0.15 11.2 0.0 0.16 11.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF561) TAXi_N PF14543.6 NODE_81175_length_195_cov_1.931250_g73234_i0forward_frame_3 - 0.07 13.4 0.5 0.072 13.3 0.5 1.1 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal zf-UDP PF14569.6 NODE_81174_length_195_cov_1.937500_g73233_i0reverse_frame_2 - 0.092 12.9 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding RING-finger Arteri_env PF01606.16 NODE_81171_length_195_cov_1.962500_g73230_i0forward_frame_2 - 0.088 12.7 0.0 0.088 12.7 0.0 1.0 1 0 0 1 1 1 0 Arterivirus envelope protein STG PF15809.5 NODE_81169_length_195_cov_1.968750_g73228_i0reverse_frame_2 - 0.048 13.7 0.0 0.048 13.7 0.0 1.0 1 0 0 1 1 1 0 Simian taste bud-specific gene product family DUF3172 PF11371.8 NODE_81169_length_195_cov_1.968750_g73228_i0reverse_frame_2 - 0.22 11.2 0.0 0.23 11.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3172) HATPase_c PF02518.26 NODE_81169_length_195_cov_1.968750_g73228_i0forward_frame_2 - 0.034 14.6 0.0 0.041 14.4 0.0 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XH PF03469.14 NODE_81168_length_195_cov_1.968750_g73227_i0forward_frame_3 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 XH domain DUF1574 PF07611.11 NODE_81168_length_195_cov_1.968750_g73227_i0forward_frame_2 - 0.035 13.4 0.1 0.036 13.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1574) DUF3666 PF12408.8 NODE_81160_length_195_cov_2.000000_g73219_i0reverse_frame_2 - 0.11 11.7 2.0 0.69 9.2 2.4 2.2 2 1 0 2 2 2 0 Ribose-5-phosphate isomerase PEP-utilizers PF00391.23 NODE_81157_length_195_cov_2.000000_g73216_i0forward_frame_2 - 0.0035 17.0 0.6 0.37 10.5 0.7 2.1 1 1 1 2 2 2 2 PEP-utilising enzyme, mobile domain Glyoxalase_5 PF14696.6 NODE_81157_length_195_cov_2.000000_g73216_i0forward_frame_2 - 0.11 12.7 0.0 0.12 12.6 0.0 1.0 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Oxygenase-NA PF09859.9 NODE_81155_length_195_cov_2.000000_g73214_i0reverse_frame_3 - 0.056 13.0 0.2 0.062 12.8 0.2 1.1 1 0 0 1 1 1 0 Oxygenase, catalysing oxidative methylation of damaged DNA 2-Hacid_dh PF00389.30 NODE_81154_length_195_cov_2.000000_g73213_i0forward_frame_2 - 1.9e-10 40.5 0.1 2e-10 40.4 0.1 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UPF0167 PF03691.14 NODE_81152_length_195_cov_2.006250_g73211_i0reverse_frame_3 - 0.053 13.3 0.3 0.06 13.1 0.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0167) Zn_ribbon_SprT PF17283.2 NODE_81152_length_195_cov_2.006250_g73211_i0reverse_frame_3 - 0.054 13.4 1.1 0.078 12.9 1.1 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Lar_restr_allev PF14354.6 NODE_81152_length_195_cov_2.006250_g73211_i0reverse_frame_3 - 0.067 13.6 1.7 0.095 13.1 1.7 1.3 1 1 0 1 1 1 0 Restriction alleviation protein Lar PhnA_Zn_Ribbon PF08274.12 NODE_81152_length_195_cov_2.006250_g73211_i0reverse_frame_3 - 0.73 9.8 6.3 4.4 7.4 1.8 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon Chlam_PMP PF02415.17 NODE_81148_length_195_cov_2.037500_g73207_i0reverse_frame_2 - 0.0026 18.1 9.5 0.054 14.0 0.7 2.9 3 0 0 3 3 3 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat MSL2-CXC PF16682.5 NODE_81143_length_195_cov_2.075000_g73202_i0forward_frame_3 - 5.6 7.2 10.4 0.23 11.6 2.8 2.2 1 1 1 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Ribosomal_L34 PF00468.17 NODE_81140_length_195_cov_2.112500_g73199_i0reverse_frame_3 - 0.052 13.5 0.2 0.052 13.5 0.2 1.8 2 0 0 2 2 2 0 Ribosomal protein L34 Glyco_hydro_31 PF01055.26 NODE_81139_length_195_cov_2.125000_g73198_i0forward_frame_2 - 6.6e-20 71.7 0.1 6.8e-20 71.7 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Ca_hom_mod PF14798.6 NODE_81138_length_195_cov_2.143750_g73197_i0forward_frame_2 - 0.061 12.4 0.0 0.065 12.3 0.0 1.0 1 0 0 1 1 1 0 Calcium homeostasis modulator TnsD PF15978.5 NODE_81137_length_195_cov_2.162500_g73196_i0forward_frame_3 - 0.0037 16.3 0.1 0.0045 16.0 0.1 1.0 1 0 0 1 1 1 1 Tn7-like transposition protein D His_Me_b4a2 PF18275.1 NODE_81137_length_195_cov_2.162500_g73196_i0forward_frame_2 - 0.016 15.3 0.4 0.028 14.5 0.4 1.4 1 0 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain GED PF02212.18 NODE_81135_length_195_cov_2.168750_g73194_i0reverse_frame_2 - 0.051 13.7 0.1 0.067 13.4 0.1 1.1 1 0 0 1 1 1 0 Dynamin GTPase effector domain ECM1 PF05782.11 NODE_81134_length_195_cov_2.175000_g73193_i0reverse_frame_3 - 0.19 10.6 0.0 0.21 10.5 0.0 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) KCT2 PF17818.1 NODE_81133_length_195_cov_2.175000_g73192_i0reverse_frame_2 - 0.044 13.9 3.8 0.048 13.8 3.8 1.0 1 0 0 1 1 1 0 Keratinocyte-associated gene product SAM_MT PF04445.13 NODE_81128_length_195_cov_2.231250_g73187_i0reverse_frame_2 - 0.19 11.1 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase Aldedh PF00171.22 NODE_81127_length_195_cov_2.237500_g73186_i0reverse_frame_3 - 3.9e-12 45.4 0.0 4.1e-12 45.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family baeRF_family2 PF18844.1 NODE_81127_length_195_cov_2.237500_g73186_i0reverse_frame_3 - 0.061 13.4 0.1 0.073 13.1 0.1 1.0 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 adh_short PF00106.25 NODE_81125_length_195_cov_2.275000_g73184_i0forward_frame_2 - 0.0037 16.7 0.0 0.0039 16.7 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase TehB PF03848.14 NODE_81125_length_195_cov_2.275000_g73184_i0forward_frame_2 - 0.0064 15.9 0.0 0.0066 15.9 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB adh_short_C2 PF13561.6 NODE_81125_length_195_cov_2.275000_g73184_i0forward_frame_2 - 0.034 13.7 0.0 0.036 13.6 0.0 1.0 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Sacchrp_dh_NADP PF03435.18 NODE_81125_length_195_cov_2.275000_g73184_i0forward_frame_2 - 0.087 13.1 0.0 0.1 12.8 0.0 1.0 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF1390 PF07150.11 NODE_81124_length_195_cov_2.281250_g73183_i0reverse_frame_3 - 0.15 11.7 0.7 0.16 11.7 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1390) TFIIE_beta PF02186.15 NODE_81118_length_195_cov_2.356250_g73177_i0reverse_frame_3 - 0.044 14.1 0.0 0.049 13.9 0.0 1.1 1 0 0 1 1 1 0 TFIIE beta subunit core domain DNA_pol3_theta PF06440.11 NODE_81118_length_195_cov_2.356250_g73177_i0reverse_frame_3 - 0.048 13.3 0.0 0.063 13.0 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase III, theta subunit EptA_B_N PF08019.12 NODE_81118_length_195_cov_2.356250_g73177_i0forward_frame_3 - 0.021 14.7 0.7 0.025 14.4 0.7 1.1 1 0 0 1 1 1 0 Phosphoethanolamine transferase EptA/EptB RE_BsaWI PF18643.1 NODE_81117_length_195_cov_2.387500_g73176_i0reverse_frame_3 - 0.053 13.4 0.4 0.062 13.2 0.4 1.2 1 1 0 1 1 1 0 BsaWI restriction endonuclease type 2 DHHC PF01529.20 NODE_81115_length_195_cov_2.443750_g73174_i0forward_frame_3 - 7.1e-05 22.9 0.3 8.5e-05 22.7 0.3 1.1 1 0 0 1 1 1 1 DHHC palmitoyltransferase VPR PF00522.18 NODE_81111_length_195_cov_2.512500_g73170_i0forward_frame_2 - 0.067 13.2 0.4 0.073 13.1 0.4 1.1 1 0 0 1 1 1 0 VPR/VPX protein DUF4787 PF16029.5 NODE_81110_length_195_cov_2.531250_g73169_i0reverse_frame_2 - 0.29 11.2 4.5 0.48 10.5 4.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4787) Phage_FRD3 PF05798.11 NODE_81106_length_195_cov_2.668750_g73165_i0forward_frame_3 - 0.13 12.5 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage FRD3 protein ATP-synt_8 PF00895.20 NODE_81104_length_195_cov_2.675000_g73163_i0forward_frame_2 - 0.44 11.0 4.7 1.4 9.4 0.7 2.1 1 1 1 2 2 2 0 ATP synthase protein 8 Mononeg_mRNAcap PF14318.6 NODE_81103_length_195_cov_2.675000_g73162_i0reverse_frame_3 - 0.053 12.8 0.1 0.057 12.7 0.1 1.0 1 0 0 1 1 1 0 Mononegavirales mRNA-capping region V Omega_Repress PF07764.11 NODE_81103_length_195_cov_2.675000_g73162_i0reverse_frame_3 - 0.12 13.0 0.1 5 7.8 0.0 2.0 2 0 0 2 2 2 0 Omega Transcriptional Repressor ADH_N PF08240.12 NODE_81102_length_195_cov_2.687500_g73161_i0forward_frame_2 - 2.6e-15 56.2 0.2 2.8e-15 56.2 0.2 1.0 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain TOBE_2 PF08402.10 NODE_81102_length_195_cov_2.687500_g73161_i0forward_frame_2 - 0.046 13.9 0.0 0.055 13.6 0.0 1.1 1 0 0 1 1 1 0 TOBE domain Gamma-thionin PF00304.20 NODE_81100_length_195_cov_2.706250_g73159_i0reverse_frame_2 - 0.014 15.7 0.7 0.019 15.2 0.7 1.1 1 0 0 1 1 1 0 Gamma-thionin family Sugar_tr PF00083.24 NODE_81099_length_195_cov_2.718750_g73158_i0forward_frame_2 - 7.1e-15 54.8 2.2 7.7e-15 54.7 2.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_81099_length_195_cov_2.718750_g73158_i0forward_frame_2 - 6.7e-06 25.3 0.5 8.2e-06 25.0 0.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily ACT_5 PF13710.6 NODE_81097_length_195_cov_2.750000_g73156_i0reverse_frame_3 - 0.11 12.3 0.0 0.21 11.5 0.0 1.5 2 0 0 2 2 2 0 ACT domain Sec23_trunk PF04811.15 NODE_81097_length_195_cov_2.750000_g73156_i0reverse_frame_2 - 0.03 13.9 0.3 0.034 13.7 0.3 1.0 1 0 0 1 1 1 0 Sec23/Sec24 trunk domain DUF4718 PF15842.5 NODE_81097_length_195_cov_2.750000_g73156_i0reverse_frame_2 - 0.099 12.4 0.5 0.11 12.2 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) SSF PF00474.17 NODE_81093_length_195_cov_2.975000_g73152_i0forward_frame_3 - 5e-15 55.3 0.0 5.2e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Sodium:solute symporter family Peptidase_C2 PF00648.21 NODE_81092_length_195_cov_3.037500_g73151_i0forward_frame_3 - 1.5e-10 40.6 0.0 1.7e-10 40.5 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Peptidase_C47 PF05543.13 NODE_81092_length_195_cov_3.037500_g73151_i0forward_frame_3 - 0.11 12.0 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Staphopain peptidase C47 DTW PF03942.15 NODE_81091_length_195_cov_3.081250_g73150_i0forward_frame_2 - 0.019 14.7 2.8 0.021 14.6 2.8 1.0 1 0 0 1 1 1 0 DTW domain DUF4743 PF15916.5 NODE_81088_length_195_cov_3.212500_g73147_i0reverse_frame_3 - 0.067 13.2 0.1 0.07 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4743) Lamprin PF06403.11 NODE_81087_length_195_cov_3.225000_g73146_i0forward_frame_2 - 0.005 16.8 2.1 0.0054 16.7 2.1 1.1 1 0 0 1 1 1 1 Lamprin Keratin_2_head PF16208.5 NODE_81087_length_195_cov_3.225000_g73146_i0forward_frame_2 - 0.068 13.3 5.9 0.065 13.4 5.9 1.0 1 0 0 1 1 1 0 Keratin type II head Mab-21 PF03281.14 NODE_81086_length_195_cov_3.281250_g73145_i0reverse_frame_2 - 0.017 14.4 0.4 0.019 14.3 0.4 1.0 1 0 0 1 1 1 0 Mab-21 protein Imm27 PF15590.6 NODE_81086_length_195_cov_3.281250_g73145_i0reverse_frame_2 - 0.03 14.1 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 27 BPD_transp_1 PF00528.22 NODE_81086_length_195_cov_3.281250_g73145_i0forward_frame_2 - 6.2e-11 42.4 0.1 6.5e-11 42.3 0.1 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SET_assoc PF11767.8 NODE_81083_length_195_cov_3.600000_g73142_i0forward_frame_3 - 0.095 12.4 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated U71 PF17474.2 NODE_81082_length_195_cov_3.662500_g73141_i0reverse_frame_3 - 0.11 12.4 0.4 0.15 12.0 0.4 1.3 1 0 0 1 1 1 0 Tegument protein UL11 homolog MR_MLE_C PF13378.6 NODE_81082_length_195_cov_3.662500_g73141_i0reverse_frame_2 - 6.9e-07 29.1 0.0 8.4e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MORN PF02493.20 NODE_81078_length_195_cov_4.275000_g73137_i0reverse_frame_2 - 1.3e-09 37.4 16.1 6.5e-06 25.7 0.3 4.0 4 0 0 4 4 4 3 MORN repeat Transposase_22 PF02994.14 NODE_81076_length_195_cov_5.837500_g73135_i0reverse_frame_2 - 0.11 12.7 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 L1 transposable element RBD-like domain Antimicrobial23 PF16048.5 NODE_81075_length_195_cov_6.775000_g73134_i0reverse_frame_2 - 0.14 11.9 3.5 0.24 11.1 3.5 1.4 1 0 0 1 1 1 0 Frog antimicrobial peptide Man-6-P_recep PF02157.15 NODE_81072_length_195_cov_10.868750_g73131_i0reverse_frame_3 - 0.023 13.8 1.1 0.023 13.8 1.1 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate receptor OATP PF03137.20 NODE_81072_length_195_cov_10.868750_g73131_i0reverse_frame_3 - 0.052 11.8 0.2 0.052 11.8 0.2 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family SCAPER_N PF16501.5 NODE_81072_length_195_cov_10.868750_g73131_i0reverse_frame_3 - 0.07 13.1 2.1 1.9 8.6 1.3 2.0 1 1 1 2 2 2 0 S phase cyclin A-associated protein in the endoplasmic reticulum PRP9_N PF16958.5 NODE_81072_length_195_cov_10.868750_g73131_i0reverse_frame_2 - 0.03 14.3 0.8 0.032 14.3 0.8 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor PRP9 N-terminus PCMT PF01135.19 NODE_81069_length_195_cov_15.393750_g73128_i0reverse_frame_3 - 0.049 13.4 0.0 0.053 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF3011 PF11218.8 NODE_81068_length_195_cov_17.768750_g73127_i0forward_frame_3 - 0.02 14.9 3.7 0.021 14.8 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3011) DUF4718 PF15842.5 NODE_81066_length_195_cov_20.606250_g73125_i0reverse_frame_3 - 0.059 13.2 0.5 0.059 13.2 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) TPR_11 PF13414.6 NODE_81064_length_195_cov_26.012500_g73123_i0forward_frame_3 - 0.032 13.9 0.0 0.045 13.4 0.0 1.3 1 0 0 1 1 1 0 TPR repeat Cnn_1N PF07989.11 NODE_81062_length_195_cov_28.150000_g73121_i0reverse_frame_2 - 0.037 14.2 6.3 0.04 14.1 6.3 1.1 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 TBD PF12845.7 NODE_81060_length_195_cov_30.031250_g73119_i0reverse_frame_2 - 0.74 9.8 4.6 0.13 12.2 1.0 1.5 2 0 0 2 2 2 0 TBD domain DUF2373 PF10180.9 NODE_81056_length_195_cov_35.368750_g73115_i0forward_frame_3 - 0.0022 17.8 0.0 0.003 17.4 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2373) DUF1479 PF07350.12 NODE_81056_length_195_cov_35.368750_g73115_i0forward_frame_2 - 0.061 12.1 0.0 0.069 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) YozE_SAM_like PF06855.12 NODE_81050_length_195_cov_39.206250_g73109_i0reverse_frame_2 - 0.017 15.3 0.1 0.02 15.0 0.1 1.1 1 0 0 1 1 1 0 YozE SAM-like fold F-box-like PF12937.7 NODE_81050_length_195_cov_39.206250_g73109_i0forward_frame_2 - 0.024 14.5 0.2 0.033 14.1 0.2 1.2 1 0 0 1 1 1 0 F-box-like Rhodanese_C PF12368.8 NODE_81043_length_195_cov_43.056250_g73102_i0forward_frame_3 - 0.07 13.5 2.6 0.1 13.0 2.6 1.3 1 0 0 1 1 1 0 Rhodanase C-terminal Ykof PF07615.11 NODE_81043_length_195_cov_43.056250_g73102_i0forward_frame_2 - 0.053 14.0 0.3 0.061 13.8 0.3 1.1 1 0 0 1 1 1 0 YKOF-related Family TTL PF03133.15 NODE_81041_length_195_cov_44.306250_g73100_i0reverse_frame_2 - 9.7e-07 28.2 0.0 1e-06 28.1 0.0 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family GSH-S_ATP PF02955.16 NODE_81041_length_195_cov_44.306250_g73100_i0reverse_frame_2 - 0.0065 15.9 0.1 0.0067 15.9 0.1 1.0 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain PIG-H PF10181.9 NODE_81041_length_195_cov_44.306250_g73100_i0forward_frame_3 - 0.021 14.7 0.0 0.027 14.3 0.0 1.2 1 0 0 1 1 1 0 GPI-GlcNAc transferase complex, PIG-H component zf-UBP_var PF17807.1 NODE_81039_length_195_cov_46.268750_g73098_i0forward_frame_3 - 0.096 12.5 4.6 0.23 11.2 4.1 1.8 1 1 1 2 2 2 0 Variant UBP zinc finger Peptidase_M17 PF00883.21 NODE_81028_length_195_cov_59.656250_g73087_i0reverse_frame_2 - 0.00079 18.8 0.0 0.0009 18.6 0.0 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain RF-1 PF00472.20 NODE_81026_length_195_cov_60.006250_g73085_i0reverse_frame_3 - 0.022 14.7 0.0 0.023 14.6 0.0 1.0 1 0 0 1 1 1 0 RF-1 domain OATP PF03137.20 NODE_81025_length_195_cov_61.112500_g73084_i0reverse_frame_2 - 0.24 9.6 2.8 0.24 9.7 2.8 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family UL11 PF11094.8 NODE_81022_length_195_cov_63.118750_g73081_i0reverse_frame_2 - 0.0039 17.0 0.2 0.0052 16.6 0.2 1.2 1 0 0 1 1 1 1 Membrane-associated tegument protein TPIP1 PF15338.6 NODE_81022_length_195_cov_63.118750_g73081_i0forward_frame_3 - 0.0078 16.3 0.2 0.0081 16.2 0.2 1.0 1 0 0 1 1 1 1 p53-regulated apoptosis-inducing protein 1 KASH PF10541.9 NODE_81012_length_195_cov_90.681250_g73071_i0reverse_frame_2 - 0.0034 17.6 0.2 0.0056 16.9 0.2 1.3 1 0 0 1 1 1 1 Nuclear envelope localisation domain DUF4051 PF13260.6 NODE_81012_length_195_cov_90.681250_g73071_i0forward_frame_3 - 0.11 12.2 0.5 0.16 11.8 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) SsgA PF04686.12 NODE_81008_length_195_cov_99.218750_g73067_i0forward_frame_3 - 0.039 14.0 0.0 0.04 13.9 0.0 1.1 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA DUF131 PF01998.17 NODE_81007_length_195_cov_102.537500_g73066_i0forward_frame_3 - 0.21 11.2 0.2 0.33 10.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF131 AstB PF04996.12 NODE_81006_length_195_cov_110.906250_g73065_i0reverse_frame_3 - 0.17 10.5 0.0 0.19 10.4 0.0 1.0 1 0 0 1 1 1 0 Succinylarginine dihydrolase zf-C3HC4_2 PF13923.6 NODE_81000_length_195_cov_144.768750_g73059_i0forward_frame_3 - 0.0012 18.6 0.8 0.002 17.9 0.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_81000_length_195_cov_144.768750_g73059_i0forward_frame_3 - 0.0052 16.6 0.4 0.0076 16.1 0.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_81000_length_195_cov_144.768750_g73059_i0forward_frame_3 - 0.029 14.2 5.2 0.041 13.7 5.2 1.4 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 TSGP1 PF07771.11 NODE_80998_length_195_cov_164.793750_g73057_i0reverse_frame_3 - 0.051 13.7 0.2 0.051 13.7 0.2 1.8 1 1 1 2 2 2 0 Tick salivary peptide group 1 Inhibitor_Mig-6 PF11555.8 NODE_80997_length_195_cov_187.006250_g73056_i0reverse_frame_3 - 0.012 15.7 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 zinc_ribbon_12 PF11331.8 NODE_80997_length_195_cov_187.006250_g73056_i0reverse_frame_3 - 0.017 14.9 1.3 0.032 14.1 1.3 1.4 1 0 0 1 1 1 0 Probable zinc-ribbon domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks428.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks428.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks428.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks428.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4710 PF15828.5 NODE_80993_length_195_cov_261.968750_g73052_i0reverse_frame_2 - 0.00022 21.2 3.5 0.00029 20.9 3.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4710) YMF19 PF02326.15 NODE_80993_length_195_cov_261.968750_g73052_i0forward_frame_3 - 0.15 12.8 6.9 0.19 12.5 6.9 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 SCO1-SenC PF02630.14 NODE_80988_length_195_cov_13671.425000_g73047_i0forward_frame_2 - 0.36 10.7 1.0 0.35 10.8 1.0 1.2 1 0 0 1 1 1 0 SCO1/SenC PyrI_C PF02748.15 ORF99630 - 0.0065 16.4 0.3 0.0079 16.1 0.3 1.2 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain Spc24 PF08286.11 ORF9922 - 0.032 14.5 1.2 0.033 14.4 1.2 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 RNase_P_p30 PF01876.16 ORF98875 - 0.21 11.0 0.0 0.25 10.8 0.0 1.1 1 0 0 1 1 1 0 RNase P subunit p30 PRD PF00874.20 ORF98859 - 0.022 15.0 0.7 0.028 14.7 0.7 1.1 1 0 0 1 1 1 0 PRD domain DUF1908 PF08926.11 ORF98777 - 0.53 9.3 9.3 0.54 9.3 9.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) Tmemb_cc2 PF10267.9 ORF98777 - 1.1 8.3 3.0 1.2 8.2 3.0 1.0 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein SR-25 PF10500.9 ORF98777 - 3.5 7.2 18.1 4.2 6.9 18.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF3439 PF11921.8 ORF98325 - 0.19 11.7 0.2 0.21 11.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) CARD_2 PF16739.5 ORF98304 - 0.03 14.3 0.1 0.035 14.1 0.1 1.1 1 0 0 1 1 1 0 Caspase recruitment domain SLAM PF06214.11 ORF98066 - 0.051 13.6 0.3 0.062 13.3 0.3 1.1 1 0 0 1 1 1 0 Signaling lymphocytic activation molecule (SLAM) protein Lysis_col PF02402.16 ORF97244 - 0.043 13.5 0.2 1.8 8.3 0.0 2.3 2 0 0 2 2 2 0 Lysis protein Mon1 PF03164.14 ORF96409 - 0.00024 20.3 0.2 0.00024 20.3 0.2 1.0 1 0 0 1 1 1 1 Trafficking protein Mon1 DUF1912 PF08930.10 ORF96254 - 0.063 13.4 0.0 0.07 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1912) MarC PF01914.17 ORF96078 - 0.2 11.1 4.1 0.22 10.9 4.1 1.1 1 0 0 1 1 1 0 MarC family integral membrane protein GP120 PF00516.18 ORF95813 - 0.082 11.5 0.0 0.089 11.4 0.0 1.1 1 0 0 1 1 1 0 Envelope glycoprotein GP120 PBP1_TM PF14812.6 ORF95268 - 7 7.1 9.0 11 6.5 9.0 1.4 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Prominin PF05478.11 ORF95039 - 1.3 6.9 3.7 1.4 6.7 3.7 1.0 1 0 0 1 1 1 0 Prominin ECSCR PF15820.5 ORF94905 - 0.016 15.0 0.1 0.016 15.0 0.1 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF713 PF05218.14 ORF94135 - 0.016 15.0 0.0 0.019 14.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF713) AIF-MLS PF14962.6 ORF94135 - 0.099 12.6 0.0 0.11 12.5 0.0 1.0 1 0 0 1 1 1 0 Mitochondria Localisation Sequence DOPA_dioxygen PF08883.11 ORF93739 - 0.16 12.1 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Dopa 4,5-dioxygenase family TEX19 PF15553.6 ORF93021 - 0.4 10.6 1.0 0.49 10.3 1.0 1.1 1 0 0 1 1 1 0 Testis-expressed protein 19 CobW_C PF07683.14 ORF92832 - 0.054 13.4 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 Cobalamin synthesis protein cobW C-terminal domain Zn_dep_PLPC PF00882.18 ORF91901 - 0.2 11.7 2.2 0.2 11.6 2.2 1.0 1 0 0 1 1 1 0 Zinc dependent phospholipase C ACOX PF01756.19 ORF9104 - 0.015 14.9 0.1 0.015 14.9 0.1 1.0 1 0 0 1 1 1 0 Acyl-CoA oxidase Herpes_UL74 PF07982.12 ORF90592 - 0.047 12.7 0.1 0.048 12.6 0.1 1.0 1 0 0 1 1 1 0 Herpes UL74 glycoproteins DUF2385 PF09539.10 ORF90546 - 0.11 13.0 0.1 0.13 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2385) HemY_N PF07219.13 ORF9037 - 0.18 12.0 0.5 0.2 11.8 0.5 1.1 1 0 0 1 1 1 0 HemY protein N-terminus DUF2830 PF11125.8 ORF9037 - 4.8 7.2 7.2 1.1 9.3 2.7 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF2830) Dopey_N PF04118.14 ORF89144 - 0.056 12.5 0.1 0.068 12.3 0.1 1.0 1 0 0 1 1 1 0 Dopey, N-terminal PEGSRP PF07623.11 ORF88897 - 1.9 8.4 5.0 0.83 9.5 0.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) DUF3953 PF13129.6 ORF8796 - 0.027 14.2 1.3 0.04 13.7 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3953) Herpes_UL49_2 PF04823.12 ORF8779 - 0.04 14.0 0.5 0.047 13.8 0.5 1.0 1 0 0 1 1 1 0 Herpesvirus UL49 tegument protein RTX_C PF08339.10 ORF86315 - 0.0062 16.6 2.1 0.0062 16.6 2.1 1.1 1 0 0 1 1 1 1 RTX C-terminal domain Pkinase PF00069.25 ORF86217 - 4.5e-05 22.9 0.1 5e-05 22.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain zf-LITAF-like PF10601.9 ORF85939 - 0.049 13.9 2.3 0.051 13.8 2.3 1.2 1 0 0 1 1 1 0 LITAF-like zinc ribbon domain HSL_N PF06350.12 ORF85895 - 0.04 12.9 0.2 0.043 12.8 0.2 1.0 1 0 0 1 1 1 0 Hormone-sensitive lipase (HSL) N-terminus ArsC PF03960.15 ORF85543 - 0.063 13.3 0.1 0.079 13.0 0.1 1.3 1 1 0 1 1 1 0 ArsC family Plasmod_dom_1 PF09715.10 ORF85277 - 0.014 15.4 0.5 0.022 14.8 0.5 1.4 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) Amj PF10997.8 ORF851 - 0.029 13.7 0.6 0.031 13.6 0.6 1.1 1 0 0 1 1 1 0 Alternate to MurJ Pkinase PF00069.25 ORF84758 - 5.5e-06 25.9 0.0 6e-06 25.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF84758 - 0.00066 19.0 0.0 0.00068 19.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Op_neuropeptide PF08035.11 ORF83978 - 0.13 12.2 0.3 0.19 11.6 0.3 1.3 1 0 0 1 1 1 0 Opioids neuropeptide DUF2385 PF09539.10 ORF83918 - 0.11 13.0 0.1 0.13 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2385) Bee_toxin PF17454.2 ORF83388 - 7.5 6.7 7.2 46 4.1 7.2 2.1 1 1 0 1 1 1 0 Honey bee toxin P34-Arc PF04045.14 ORF83381 - 0.018 14.8 0.5 0.022 14.5 0.5 1.0 1 0 0 1 1 1 0 Arp2/3 complex, 34 kD subunit p34-Arc Neurokinin_B PF03823.14 ORF83182 - 0.4 10.8 1.9 17 5.5 0.1 2.1 2 0 0 2 2 2 0 Neurokinin B Tim29 PF10171.9 ORF83163 - 0.15 11.6 0.1 0.16 11.5 0.1 1.1 1 0 0 1 1 1 0 Translocase of the Inner Mitochondrial membrane 29 TFR_dimer PF04253.15 ORF82723 - 0.084 13.0 0.4 0.093 12.8 0.4 1.0 1 0 0 1 1 1 0 Transferrin receptor-like dimerisation domain DNA_pol3_beta_2 PF02767.16 ORF82627 - 0.14 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III beta subunit, central domain DUF3810 PF12725.7 ORF82138 - 0.086 12.2 1.3 0.075 12.4 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) GWT1 PF06423.12 ORF82054 - 1.7 8.8 10.0 1.8 8.7 10.0 1.1 1 0 0 1 1 1 0 GWT1 Pox_A12 PF04651.13 ORF81334 - 0.0054 16.8 1.8 0.0055 16.8 1.8 1.0 1 0 0 1 1 1 1 Poxvirus A12 protein Zn_ribbon_SprT PF17283.2 ORF80714 - 0.0006 19.7 4.1 0.0017 18.3 4.1 1.7 1 1 0 1 1 1 1 SprT-like zinc ribbon domain MTES_1575 PF18741.1 ORF80626 - 0.054 13.7 0.0 0.07 13.3 0.0 1.1 1 0 0 1 1 1 0 REase_MTES_1575 Orthopox_A36R PF05950.11 ORF80607 - 0.17 12.0 1.6 0.17 12.0 1.6 1.0 1 0 0 1 1 1 0 Orthopoxvirus A36R protein DOPA_dioxygen PF08883.11 ORF8025 - 0.16 12.1 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Dopa 4,5-dioxygenase family DNA_gyraseB_C PF00986.21 ORF79873 - 5.7e-22 77.7 0.1 6.5e-22 77.5 0.1 1.1 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus Lipase_GDSL_lke PF16255.5 ORF79790 - 0.1 11.9 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase HisKA_3 PF07730.13 ORF79697 - 0.038 14.5 0.9 0.078 13.5 0.9 1.6 1 1 0 1 1 1 0 Histidine kinase DUF4054 PF13262.6 ORF79697 - 0.039 14.0 0.1 0.04 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4054) CDC14 PF08045.11 ORF79697 - 0.059 12.5 0.2 0.067 12.3 0.2 1.0 1 0 0 1 1 1 0 Cell division control protein 14, SIN component PhaP_Bmeg PF09602.10 ORF79697 - 0.073 13.0 0.1 0.08 12.9 0.1 1.1 1 0 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) DUF948 PF06103.11 ORF79697 - 0.12 12.7 0.0 0.17 12.2 0.0 1.3 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) LZ3wCH PF18517.1 ORF79530 - 0.14 12.3 3.0 0.19 11.9 2.2 1.7 1 1 1 2 2 2 0 Leucine zipper with capping helix domain DUF4969 PF16339.5 ORF78988 - 0.051 13.9 0.0 0.052 13.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4969) OrfB_IS605 PF01385.19 ORF78462 - 0.021 15.0 0.5 0.022 15.0 0.5 1.1 1 0 0 1 1 1 0 Probable transposase CytadhesinP1 PF12378.8 ORF78450 - 0.055 13.6 0.0 0.1 12.8 0.0 1.5 1 1 1 2 2 2 0 Trypsin-sensitive surface-exposed protein DUF2231 PF09990.9 ORF7786 - 0.014 15.8 0.1 0.017 15.5 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2231) Atypical_Card PF18461.1 ORF77785 - 0.065 13.5 0.0 0.078 13.2 0.0 1.1 1 0 0 1 1 1 0 Atypical caspase recruitment domain cNMP_binding PF00027.29 ORF77538 - 8.1e-06 25.8 0.0 9.8e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Mgr1 PF08602.10 ORF77503 - 0.16 10.7 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit TPR_1 PF00515.28 ORF76204 - 0.0022 17.8 0.0 0.0033 17.2 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF76204 - 0.044 13.9 0.0 0.067 13.3 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF76204 - 0.067 13.4 0.0 0.092 13.0 0.0 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat Peripla_BP_2 PF01497.18 ORF76204 - 0.13 11.8 0.1 0.17 11.4 0.1 1.4 1 1 0 1 1 1 0 Periplasmic binding protein DEC-1_N PF04625.13 ORF75767 - 0.05 12.6 0.0 0.05 12.6 0.0 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Chordopox_A30L PF06015.12 ORF74754 - 0.1 12.4 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Chordopoxvirus A30L protein Gemini_AC4_5_2 PF08464.10 ORF72984 - 0.053 13.5 0.2 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 Geminivirus AC4/5 conserved region Flot PF15975.5 ORF72742 - 0.097 12.9 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Flotillin HAUS2 PF15003.6 ORF72742 - 0.16 11.7 0.0 0.16 11.6 0.0 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 2 DUF3950 PF13132.6 ORF72176 - 2.1e-19 69.0 0.2 3e-19 68.4 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3950) SAM_4 PF18017.1 ORF71835 - 0.05 13.6 1.0 0.05 13.6 1.0 1.4 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) DUF5409 PF17421.2 ORF7163 - 0.13 13.0 3.3 0.15 12.8 3.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Serine_protease PF18405.1 ORF71603 - 0.077 12.1 0.3 0.085 12.0 0.3 1.2 1 0 0 1 1 1 0 Gammaproteobacterial serine protease DUF2254 PF10011.9 ORF71562 - 3.7 6.3 6.9 4.1 6.1 6.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Plasmod_dom_1 PF09715.10 ORF70844 - 0.014 15.4 0.5 0.022 14.8 0.5 1.4 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) Mgr1 PF08602.10 ORF70779 - 0.16 10.7 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit RNR_N PF08343.10 ORF69925 - 0.022 14.8 0.5 0.11 12.5 0.2 1.9 1 1 0 2 2 2 0 Ribonucleotide reductase N-terminal L27_2 PF09045.10 ORF69790 - 0.11 12.4 0.1 0.18 11.8 0.1 1.4 1 1 0 1 1 1 0 L27_2 IQ_SEC7_PH PF16453.5 ORF69741 - 0.038 14.0 0.3 0.041 13.9 0.3 1.1 1 0 0 1 1 1 0 PH domain zf-TAZ PF02135.16 ORF69080 - 0.078 13.4 5.8 0.095 13.2 5.8 1.1 1 0 0 1 1 1 0 TAZ zinc finger DUF2605 PF10792.9 ORF68862 - 0.095 12.6 0.2 0.13 12.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2605) Dynamitin PF04912.14 ORF68707 - 0.015 14.7 0.1 0.016 14.6 0.1 1.1 1 0 0 1 1 1 0 Dynamitin Phasin PF05597.11 ORF68707 - 0.06 13.3 0.5 0.07 13.1 0.5 1.1 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) TRF PF08558.10 ORF68228 - 0.033 13.8 2.1 0.037 13.6 2.1 1.0 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) PAN_2 PF08276.11 ORF67922 - 0.14 12.3 6.1 1.8 8.7 6.2 2.0 1 1 1 2 2 2 0 PAN-like domain DUF1207 PF06727.11 ORF67922 - 0.21 10.5 0.0 0.21 10.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1207) Med22 PF06179.12 ORF67744 - 0.011 16.0 1.2 0.011 16.0 1.2 1.5 1 1 1 2 2 2 0 Surfeit locus protein 5 subunit 22 of Mediator complex Sec62 PF03839.16 ORF67744 - 8 5.9 10.3 8.8 5.8 10.3 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 DUF3923 PF13061.6 ORF67725 - 0.023 14.8 0.3 0.025 14.6 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3923) UPF0149 PF03695.13 ORF67717 - 0.028 14.7 0.0 0.028 14.7 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0149) DUF2975 PF11188.8 ORF67575 - 0.062 13.2 0.1 0.063 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF1844 PF08899.11 ORF67378 - 0.0073 16.6 0.1 0.009 16.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1844) Fig1 PF12351.8 ORF66523 - 0.032 14.2 1.5 0.034 14.1 1.5 1.0 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 DUF5510 PF17629.2 ORF66523 - 0.059 13.3 0.2 0.083 12.8 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5510) Frag1 PF10277.9 ORF66422 - 0.046 13.3 3.1 0.049 13.2 3.1 1.0 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family LytTR PF04397.15 ORF65925 - 0.039 14.2 0.1 0.044 14.0 0.1 1.2 1 0 0 1 1 1 0 LytTr DNA-binding domain DiS_P_DiS PF06750.13 ORF65655 - 0.1 12.7 1.2 0.34 11.0 0.4 1.8 2 0 0 2 2 2 0 Bacterial Peptidase A24 N-terminal domain Choline_sulf_C PF12411.8 ORF64975 - 0.049 13.4 0.0 0.069 13.0 0.0 1.2 1 0 0 1 1 1 0 Choline sulfatase enzyme C terminal Nucleos_tra2_C PF07662.13 ORF64975 - 0.18 11.7 0.1 0.21 11.4 0.1 1.0 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus DPM2 PF07297.12 ORF64600 - 0.13 12.6 0.2 0.19 12.1 0.2 1.5 1 1 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Novirhabdo_Nv PF05554.11 ORF64489 - 0.023 14.5 0.0 0.025 14.3 0.0 1.1 1 0 0 1 1 1 0 Viral hemorrhagic septicemia virus non-virion protein SAM_decarbox PF01536.16 ORF6394 - 1.3 8.0 4.5 4.1 6.3 4.5 1.7 1 1 0 1 1 1 0 Adenosylmethionine decarboxylase hemP PF10636.9 ORF63888 - 0.038 13.8 0.1 0.079 12.8 0.1 1.5 1 0 0 1 1 1 0 Hemin uptake protein hemP RasGEF PF00617.19 ORF63888 - 0.093 12.9 0.4 0.11 12.7 0.4 1.1 1 0 0 1 1 1 0 RasGEF domain TetR_C_9 PF14514.6 ORF63820 - 0.009 16.1 0.0 0.01 16.0 0.0 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain DUF1351 PF07083.11 ORF63771 - 0.05 13.4 0.1 0.058 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1351) FeoB_C PF07664.12 ORF63499 - 0.12 12.1 0.3 0.16 11.7 0.3 1.2 1 0 0 1 1 1 0 Ferrous iron transport protein B C terminus RTX_C PF08339.10 ORF6293 - 0.0062 16.6 2.1 0.0062 16.6 2.1 1.1 1 0 0 1 1 1 1 RTX C-terminal domain MORN PF02493.20 ORF62910 - 3e-08 33.1 6.0 0.00056 19.7 0.3 3.1 3 0 0 3 3 3 2 MORN repeat DUF3048_C PF17479.2 ORF62910 - 0.012 15.9 0.2 0.017 15.5 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3048) C-terminal domain DUF4716 PF15837.5 ORF62757 - 0.97 9.5 3.6 2.2 8.4 3.6 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4716) Defensin_2 PF01097.18 ORF61103 - 0.052 13.5 0.3 0.052 13.5 0.3 1.9 2 0 0 2 2 2 0 Arthropod defensin SID PF11778.8 ORF60679 - 0.094 12.8 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Septation initiation Coronavirus_5 PF05528.11 ORF60477 - 0.039 13.9 0.4 0.047 13.7 0.4 1.2 1 0 0 1 1 1 0 Coronavirus gene 5 protein Polysacc_deac_1 PF01522.21 ORF60125 - 0.1 12.5 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Polysaccharide deacetylase DUF4111 PF13427.6 ORF60091 - 0.044 13.9 0.1 0.048 13.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4111) Med22 PF06179.12 ORF60021 - 0.011 16.0 1.2 0.011 16.0 1.2 1.5 1 1 1 2 2 2 0 Surfeit locus protein 5 subunit 22 of Mediator complex Sec62 PF03839.16 ORF60021 - 8 5.9 10.3 8.8 5.8 10.3 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Presenilin PF01080.17 ORF59746 - 1.8 7.3 4.4 1.7 7.3 4.4 1.0 1 0 0 1 1 1 0 Presenilin PyrI_C PF02748.15 ORF58931 - 0.0065 16.4 0.3 0.0079 16.1 0.3 1.2 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain Toxin_TOLIP PF00087.21 ORF58896 - 0.012 15.9 0.4 0.015 15.5 0.4 1.2 1 0 0 1 1 1 0 Snake toxin and toxin-like protein RTT107_BRCT_6 PF16771.5 ORF58387 - 0.0045 17.1 0.0 0.0047 17.1 0.0 1.2 1 0 0 1 1 1 1 Regulator of Ty1 transposition protein 107 BRCT domain AAA_lid_8 PF17868.1 ORF58387 - 0.066 13.1 0.0 0.097 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain TetR_C_9 PF14514.6 ORF57860 - 0.009 16.1 0.0 0.01 16.0 0.0 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain Nop10p PF04135.12 ORF57435 - 6.8e-20 70.8 0.7 8.1e-20 70.6 0.7 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family FlaF PF07309.11 ORF57400 - 0.031 14.3 0.1 0.035 14.1 0.1 1.1 1 0 0 1 1 1 0 Flagellar protein FlaF DUF3073 PF11273.8 ORF57374 - 0.16 12.7 0.1 0.27 12.0 0.1 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3073) DUF3565 PF12088.8 ORF5699 - 0.012 15.6 1.1 0.017 15.0 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3565) GRIP PF01465.20 ORF56228 - 0.0042 17.0 0.2 0.008 16.1 0.2 1.4 1 0 0 1 1 1 1 GRIP domain CBP_BcsR PF10945.8 ORF56003 - 0.025 14.0 0.3 0.048 13.1 0.3 1.5 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR zf_PR_Knuckle PF18445.1 ORF55864 - 0.076 12.8 0.3 0.13 12.1 0.3 1.3 1 0 0 1 1 1 0 PR zinc knuckle motif Cir_Bir_Yir PF06022.11 ORF5580 - 0.0045 16.5 1.1 0.0048 16.4 1.1 1.1 1 0 0 1 1 1 1 Plasmodium variant antigen protein Cir/Yir/Bir PIP49_C PF12260.8 ORF55210 - 0.02 14.5 0.0 0.025 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 DUF5480 PF17576.2 ORF55049 - 0.016 15.2 0.2 0.029 14.3 0.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5480) STT3_PglB_C PF18527.1 ORF54962 - 0.025 14.7 0.1 0.028 14.5 0.1 1.1 1 0 0 1 1 1 0 STT3/PglB C-terminal beta-barrel domain Endonuc_subdom PF09062.10 ORF53706 - 0.056 14.3 0.2 0.062 14.1 0.2 1.1 1 0 0 1 1 1 0 PI-PfuI Endonuclease subdomain Borrelia_P13 PF05628.12 ORF53003 - 0.018 15.0 0.1 0.018 15.0 0.1 1.1 1 0 0 1 1 1 0 Borrelia membrane protein P13 DUF3379 PF11859.8 ORF52838 - 0.049 12.9 1.5 0.048 13.0 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) IL4_i_Ig PF18258.1 ORF52178 - 0.042 14.1 0.2 0.059 13.6 0.2 1.2 1 0 0 1 1 1 0 Interleukin-4 inducing immunoglobulin-binding domain zf-C6H2 PF15801.5 ORF51867 - 0.063 13.6 7.9 0.13 12.6 0.9 2.1 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding zf-MYND PF01753.18 ORF51867 - 0.27 11.4 3.6 0.4 10.8 0.8 2.0 1 1 1 2 2 2 0 MYND finger Consortin_C PF15281.6 ORF51588 - 0.22 11.5 0.3 0.26 11.3 0.3 1.1 1 0 0 1 1 1 0 Consortin C-terminus Phage_holin_2_1 PF04971.12 ORF51303 - 0.038 14.0 1.1 0.053 13.5 1.1 1.2 1 0 0 1 1 1 0 Bacteriophage P21 holin S AAA_29 PF13555.6 ORF51143 - 0.18 11.5 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF3103 PF11301.8 ORF51053 - 0.16 10.7 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3103) BA14K PF07886.11 ORF51053 - 2.3 8.2 5.2 7.4 6.5 5.2 1.8 1 1 0 1 1 1 0 BA14K-like protein DUF3488 PF11992.8 ORF4985 - 1.5 7.7 8.1 1.8 7.5 8.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) FSIP2 PF15783.5 ORF4973 - 0.071 11.1 0.2 0.075 11.0 0.2 1.0 1 0 0 1 1 1 0 Fibrous sheath-interacting protein 2 Viral_Beta_CD PF04530.12 ORF4911 - 3.8 7.8 7.8 5.4 7.3 7.8 1.3 1 0 0 1 1 1 0 Viral Beta C/D like family Serglycin PF04360.12 ORF48637 - 0.05 13.6 0.0 0.05 13.6 0.0 1.1 1 0 0 1 1 1 0 Serglycin HET PF06985.11 ORF4856 - 0.00012 22.4 0.7 0.00014 22.3 0.7 1.0 1 0 0 1 1 1 1 Heterokaryon incompatibility protein (HET) Med18 PF09637.10 ORF47681 - 0.049 13.5 0.0 0.049 13.5 0.0 1.0 1 0 0 1 1 1 0 Med18 protein PH_10 PF15411.6 ORF47175 - 0.054 13.8 1.7 0.06 13.6 1.7 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain 7TM_GPCR_Sru PF10322.9 ORF47175 - 0.56 9.5 6.9 0.61 9.3 6.9 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sru DUF3736 PF12540.8 ORF47086 - 0.08 13.1 0.1 0.088 12.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3736) Dimerisation2 PF16864.5 ORF46703 - 0.013 15.5 0.1 0.015 15.3 0.1 1.1 1 0 0 1 1 1 0 Dimerisation domain Piwi PF02171.17 ORF46635 - 0.12 11.5 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Piwi domain DUF4022 PF13214.6 ORF46287 - 0.091 13.0 3.0 0.11 12.8 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4022) ERGIC_N PF13850.6 ORF45652 - 0.1 13.0 0.2 0.12 12.8 0.2 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) UL42 PF17638.2 ORF45652 - 0.12 12.3 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 HCMV UL42 SecG PF03840.14 ORF45647 - 0.025 14.6 1.3 0.031 14.3 1.3 1.2 1 0 0 1 1 1 0 Preprotein translocase SecG subunit DUF4710 PF15828.5 ORF45343 - 0.21 11.7 0.0 0.26 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) BLACT_WH PF17778.1 ORF4501 - 0.027 14.5 0.0 0.061 13.3 0.0 1.6 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain DUF2682 PF10909.8 ORF44943 - 0.0051 17.3 2.1 0.0052 17.2 1.8 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2682) Potex_coat PF06184.11 ORF44594 - 0.089 12.4 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Potexvirus coat protein HK97-gp10_like PF04883.12 ORF44079 - 0.073 14.1 0.4 0.084 13.9 0.4 1.1 1 0 0 1 1 1 0 Bacteriophage HK97-gp10, putative tail-component Imm5 PF14423.6 ORF44079 - 3.6 7.8 4.9 4 7.6 4.9 1.3 1 1 0 1 1 1 0 Immunity protein Imm5 zf-C2H2_11 PF16622.5 ORF43430 - 1 9.1 5.4 2.4 8.0 5.4 1.7 1 1 0 1 1 1 0 zinc-finger C2H2-type Pep_M12B_propep PF01562.19 ORF43293 - 0.087 13.1 0.4 0.093 13.0 0.4 1.0 1 0 0 1 1 1 0 Reprolysin family propeptide zf-C4 PF00105.18 ORF43293 - 0.27 11.7 4.7 0.36 11.3 4.7 1.3 1 0 0 1 1 1 0 Zinc finger, C4 type (two domains) CSTF_C PF14304.6 ORF43104 - 0.094 12.3 1.0 3.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Transcription termination and cleavage factor C-terminal DUF4627 PF15425.6 ORF42917 - 0.031 13.9 0.0 0.034 13.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4627) DUF1158 PF06643.11 ORF42715 - 0.02 15.4 0.1 0.022 15.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1158) RTX_C PF08339.10 ORF41895 - 0.0062 16.6 2.1 0.0062 16.6 2.1 1.1 1 0 0 1 1 1 1 RTX C-terminal domain 2-Hacid_dh_C PF02826.19 ORF41650 - 1.2e-08 34.5 0.2 1.6e-08 34.1 0.2 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VIT1 PF01988.19 ORF40940 - 0.93 9.3 6.0 1.1 9.1 6.0 1.1 1 0 0 1 1 1 0 VIT family Bcr-Abl_Oligo PF09036.10 ORF39984 - 0.0044 17.0 0.2 0.0049 16.8 0.2 1.1 1 0 0 1 1 1 1 Bcr-Abl oncoprotein oligomerisation domain NPV_P10 PF05531.12 ORF39984 - 0.051 14.0 0.2 0.06 13.8 0.2 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein SpoOE-like PF09388.10 ORF39984 - 0.062 13.2 0.5 2 8.4 0.0 2.2 1 1 1 2 2 2 0 Spo0E like sporulation regulatory protein DUF4349 PF14257.6 ORF39984 - 0.088 12.2 0.1 0.09 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Chordopox_L2 PF05803.12 ORF39749 - 3.5 7.5 9.8 4.1 7.3 9.8 1.2 1 0 0 1 1 1 0 Chordopoxvirus L2 protein Matrilin_ccoil PF10393.9 ORF39556 - 0.012 15.4 0.1 0.023 14.6 0.1 1.4 1 0 0 1 1 1 0 Trimeric coiled-coil oligomerisation domain of matrilin DUF5129 PF17173.4 ORF39556 - 0.071 12.2 0.0 0.073 12.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) HK PF02110.15 ORF3805 - 1e-08 34.9 0.5 1.1e-08 34.8 0.5 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family DUF4253 PF14062.6 ORF3805 - 0.026 14.7 0.0 0.026 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4253) Phos_pyr_kin PF08543.12 ORF3805 - 0.18 11.1 0.3 0.19 11.1 0.3 1.1 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase ARPC4 PF05856.12 ORF37454 - 0.022 14.4 0.1 0.024 14.3 0.1 1.0 1 0 0 1 1 1 0 ARP2/3 complex 20 kDa subunit (ARPC4) GNVR PF13807.6 ORF36707 - 0.088 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 G-rich domain on putative tyrosine kinase 7TM_GPCR_Srab PF10292.9 ORF36510 - 0.034 13.1 6.4 0.039 12.9 6.4 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor DUF809 PF05663.11 ORF36510 - 0.31 11.2 2.0 0.29 11.3 1.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF809) Kelch_5 PF13854.6 ORF36490 - 0.083 12.9 0.8 0.15 12.1 0.8 1.4 1 0 0 1 1 1 0 Kelch motif Herpes_UL69 PF05459.12 ORF36459 - 0.017 14.5 2.0 0.017 14.5 2.0 1.2 1 0 0 1 1 1 0 Herpesvirus transcriptional regulator family Pmp3 PF01679.17 ORF36026 - 0.068 13.4 0.2 0.098 12.9 0.2 1.3 1 0 0 1 1 1 0 Proteolipid membrane potential modulator DUF2385 PF09539.10 ORF35990 - 0.11 13.0 0.1 0.13 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2385) T2SSN PF01203.19 ORF35406 - 0.032 14.5 0.3 0.038 14.2 0.3 1.0 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein N SRF-TF PF00319.18 ORF35 - 0.12 11.9 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 SRF-type transcription factor (DNA-binding and dimerisation domain) Cas1_AcylT PF07779.12 ORF34441 - 0.012 14.5 0.1 0.012 14.5 0.1 1.0 1 0 0 1 1 1 0 10 TM Acyl Transferase domain found in Cas1p DUF4428 PF14471.6 ORF33431 - 0.018 14.9 0.0 0.023 14.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) Pacifastin_I PF05375.13 ORF33383 - 3.5 7.4 8.6 0.33 10.7 2.7 2.1 2 0 0 2 2 2 0 Pacifastin inhibitor (LCMII) Tom6 PF17112.5 ORF32660 - 0.098 12.2 0.1 0.18 11.3 0.1 1.4 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom6, fungal Plasmod_dom_1 PF09715.10 ORF32648 - 0.014 15.4 0.5 0.022 14.8 0.5 1.4 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) Pigment_DH PF06324.11 ORF32586 - 8.2 6.8 7.3 46 4.4 0.2 3.3 3 0 0 3 3 3 0 Pigment-dispersing hormone (PDH) Dodecin PF07311.12 ORF31239 - 0.041 14.1 0.4 0.83 10.0 0.1 2.0 1 1 1 2 2 2 0 Dodecin GRIP PF01465.20 ORF30930 - 6e-05 22.9 0.0 8.1e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 GRIP domain TRP PF06011.12 ORF3088 - 0.0014 17.5 1.4 0.0015 17.4 1.4 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel MRAP PF15183.6 ORF3088 - 1.2 9.1 4.4 1.3 9.0 4.0 1.4 1 1 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Rod-binding PF10135.9 ORF30666 - 0.11 13.1 0.1 0.48 11.0 0.0 1.8 2 0 0 2 2 2 0 Rod binding protein FERM_N_2 PF18038.1 ORF30034 - 0.044 14.6 0.1 0.044 14.6 0.1 1.0 1 0 0 1 1 1 0 FERM N-terminal domain UPF0688 PF15772.5 ORF30034 - 0.13 12.5 1.4 0.13 12.5 1.4 1.0 1 0 0 1 1 1 0 UPF0688 family DUF5085 PF16895.5 ORF2931 - 0.062 13.6 0.2 0.064 13.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5085) Antimicrobial_6 PF08036.11 ORF2929 - 0.0064 16.5 0.8 0.0084 16.1 0.8 1.2 1 0 0 1 1 1 1 Diapausin family of antimicrobial peptide SHIPPO-rpt PF07004.12 ORF28977 - 0.06 14.3 0.6 0.12 13.4 0.1 1.8 2 0 0 2 2 2 0 Sperm-tail PG-rich repeat DUF2428 PF10350.9 ORF27342 - 0.049 12.9 0.5 0.05 12.8 0.5 1.0 1 0 0 1 1 1 0 Putative death-receptor fusion protein (DUF2428) TPD52 PF04201.15 ORF27342 - 0.15 11.6 0.0 0.16 11.6 0.0 1.0 1 0 0 1 1 1 0 Tumour protein D52 family DUF1912 PF08930.10 ORF27336 - 0.063 13.4 0.0 0.07 13.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1912) zf-FCS PF06467.14 ORF27329 - 5.4 7.0 19.5 0.27 11.2 7.0 2.1 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif DnaGprimase_HBD PF16730.5 ORF26408 - 0.2 11.8 0.0 0.22 11.6 0.0 1.1 1 0 0 1 1 1 0 DnaG-primase C-terminal, helicase-binding domain Peptidase_M76 PF09768.9 ORF25699 - 2.2e-10 40.6 0.0 2.5e-10 40.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase M76 family MMPL PF03176.15 ORF25443 - 0.36 9.7 0.9 0.32 9.9 0.9 1.0 1 0 0 1 1 1 0 MMPL family COX4_pro_2 PF07835.12 ORF24507 - 0.15 12.2 0.1 0.15 12.2 0.1 2.4 3 0 0 3 3 3 0 Bacterial aa3 type cytochrome c oxidase subunit IV DUF2385 PF09539.10 ORF23527 - 0.11 13.0 0.1 0.13 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2385) 4PPT_N PF17837.1 ORF23447 - 0.08 13.1 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 4'-phosphopantetheinyl transferase N-terminal domain Tissue_fac PF01108.17 ORF23279 - 0.06 13.2 0.1 0.068 13.0 0.1 1.3 1 1 0 1 1 1 0 Tissue factor Peptidase_M91 PF14891.6 ORF23279 - 0.092 13.1 2.2 0.097 13.0 2.2 1.0 1 0 0 1 1 1 0 Effector protein Cadherin_C_2 PF16492.5 ORF23195 - 0.04 14.7 1.6 0.046 14.5 1.6 1.3 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal Peptidase_C57 PF03290.13 ORF23195 - 0.14 10.9 1.8 0.15 10.8 1.8 1.0 1 0 0 1 1 1 0 Vaccinia virus I7 processing peptidase CBP_CCPA PF17040.5 ORF22838 - 0.014 15.9 0.0 0.014 15.9 0.0 1.1 1 0 0 1 1 1 0 Cellulose-complementing protein A VirK PF06903.12 ORF22001 - 0.034 14.2 0.0 0.035 14.2 0.0 1.0 1 0 0 1 1 1 0 VirK protein Bunya_NS-S PF01104.17 ORF21814 - 0.083 12.7 5.1 0.086 12.7 5.1 1.3 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s PRD PF00874.20 ORF21674 - 0.022 15.0 0.7 0.028 14.7 0.7 1.1 1 0 0 1 1 1 0 PRD domain DUF2937 PF11157.8 ORF21561 - 0.079 12.7 0.2 0.096 12.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) PRD PF00874.20 ORF20161 - 0.022 15.0 0.7 0.028 14.7 0.7 1.1 1 0 0 1 1 1 0 PRD domain PA28_beta PF02252.18 ORF198 - 0.082 12.6 0.1 0.098 12.3 0.1 1.1 1 0 0 1 1 1 0 Proteasome activator pa28 beta subunit RAP1 PF07218.11 ORF19782 - 0.027 12.8 1.3 0.027 12.8 1.3 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) SNF2_N PF00176.23 ORF19782 - 0.06 12.0 1.6 0.064 12.0 1.6 1.0 1 0 0 1 1 1 0 SNF2 family N-terminal domain Cdc6_C PF09079.11 ORF1948 - 0.078 13.0 0.5 0.11 12.4 0.5 1.3 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain Haem_bd PF14376.6 ORF19463 - 0.025 14.5 0.2 0.028 14.4 0.2 1.0 1 0 0 1 1 1 0 Haem-binding domain PIEZO PF15917.5 ORF19363 - 0.25 10.8 0.7 0.27 10.7 0.7 1.1 1 0 0 1 1 1 0 Piezo HHV-5_US34A PF17087.5 ORF1927 - 0.056 13.6 0.0 0.067 13.3 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus US34A protein family DUF4099 PF13351.6 ORF19245 - 0.0041 17.4 0.4 0.0048 17.1 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4099) HEPN_Cthe2314 PF18730.1 ORF18914 - 0.12 12.4 0.1 0.17 11.9 0.1 1.2 1 1 0 1 1 1 0 Cthe_2314-like HEPN MAR_sialic_bdg PF10564.9 ORF18214 - 0.077 13.0 3.9 0.082 13.0 3.9 1.1 1 0 0 1 1 1 0 Sialic-acid binding micronemal adhesive repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks429.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks429.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks429.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks429.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:45:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_1 PF07690.16 ORF99368 - 7.7e-08 31.6 14.0 3.3e-07 29.6 14.0 1.9 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF2417 PF10329.9 ORF99368 - 0.023 14.1 2.2 0.047 13.1 0.4 2.3 3 0 0 3 3 3 0 Region of unknown function (DUF2417) Pox_A12 PF04651.13 ORF99368 - 0.083 12.9 5.2 0.13 12.4 5.2 1.2 1 0 0 1 1 1 0 Poxvirus A12 protein Chorion_2 PF03964.15 ORF99368 - 0.094 13.6 4.4 0.16 12.8 4.4 1.3 1 0 0 1 1 1 0 Chorion family 2 ATP11 PF06644.11 ORF99368 - 0.15 11.9 4.2 0.2 11.4 4.2 1.1 1 0 0 1 1 1 0 ATP11 protein MDFI PF15316.6 ORF99368 - 0.17 12.0 2.4 0.31 11.1 2.4 1.4 1 0 0 1 1 1 0 MyoD family inhibitor SR-25 PF10500.9 ORF99368 - 0.4 10.3 24.7 0.58 9.7 24.7 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Macoilin PF09726.9 ORF99368 - 0.59 8.6 9.5 0.83 8.1 9.5 1.1 1 0 0 1 1 1 0 Macoilin family Mem_trans PF03547.18 ORF99368 - 0.69 8.2 6.5 1.2 7.4 6.5 1.7 1 1 0 1 1 1 0 Membrane transport protein Band_3_cyto PF07565.13 ORF99368 - 0.69 9.7 3.2 1 9.1 3.2 1.2 1 0 0 1 1 1 0 Band 3 cytoplasmic domain RecQ5 PF06959.11 ORF99368 - 0.81 9.6 7.7 1.2 9.1 7.7 1.1 1 0 0 1 1 1 0 RecQ helicase protein-like 5 (RecQ5) RAP1 PF07218.11 ORF99368 - 1 7.6 13.0 1.4 7.1 13.0 1.1 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Corona_nucleoca PF00937.18 ORF99368 - 2.6 7.0 6.5 3.7 6.5 6.5 1.1 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Pkinase_Tyr PF07714.17 ORF92943 - 7.2e-51 172.9 0.0 8.9e-51 172.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF92943 - 1.6e-47 162.1 0.0 2.1e-47 161.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF92943 - 0.013 14.9 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Neuropep_like PF15161.6 ORF92943 - 0.033 13.9 0.2 0.079 12.6 0.2 1.6 1 0 0 1 1 1 0 Neuropeptide-like PilS PF08805.11 ORF92271 - 0.0088 15.9 0.0 0.032 14.1 0.0 1.9 2 0 0 2 2 2 1 PilS N terminal Aldo_ket_red PF00248.21 ORF88420 - 7.8e-62 209.1 0.0 9.9e-62 208.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Methyltransf_11 PF08241.12 ORF8114 - 3.1e-17 63.0 0.0 6.4e-17 62.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF8114 - 1.1e-16 61.3 0.0 2.2e-16 60.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF8114 - 2e-15 56.9 0.0 2.9e-15 56.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF8114 - 2e-12 47.0 0.0 3e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 ORF8114 - 3.6e-11 43.2 0.0 5.9e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF8114 - 4e-11 42.7 0.0 8.9e-11 41.6 0.0 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF8114 - 7.8e-09 36.2 0.0 1.3e-08 35.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF8114 - 0.00051 19.6 0.0 0.0012 18.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 ORF8114 - 0.0072 16.0 0.0 0.016 14.8 0.0 1.5 1 0 0 1 1 1 1 Nodulation protein S (NodS) MetW PF07021.12 ORF8114 - 0.0099 15.5 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.19 ORF8114 - 0.071 12.8 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Radial_spoke PF04712.12 ORF80386 - 1.5e-81 274.8 0.3 1.3e-60 205.8 0.2 2.0 1 1 1 2 2 2 2 Radial spokehead-like protein NDK PF00334.19 ORF75825 - 4.2e-70 234.0 0.0 1e-41 142.1 0.0 2.1 2 0 0 2 2 2 2 Nucleoside diphosphate kinase DUF1126 PF06565.12 ORF75825 - 0.00089 19.1 0.7 0.0041 16.9 0.7 2.0 1 1 0 1 1 1 1 DUF1126 PH-like domain Pox_VLTF3 PF04947.14 ORF75825 - 0.0096 15.7 0.0 0.026 14.3 0.0 1.6 1 0 0 1 1 1 1 Poxvirus Late Transcription Factor VLTF3 like DUF4494 PF14902.6 ORF75825 - 0.023 14.6 0.2 0.04 13.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4494) NDK PF00334.19 ORF74520 - 2.3e-44 150.7 0.0 1.9e-27 95.9 0.0 2.1 2 0 0 2 2 2 2 Nucleoside diphosphate kinase DUF1126 PF06565.12 ORF74520 - 0.00014 21.6 0.2 0.00029 20.6 0.2 1.5 1 0 0 1 1 1 1 DUF1126 PH-like domain Seadorna_VP7 PF07387.11 ORF74520 - 0.0011 18.1 0.1 0.0019 17.3 0.1 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 VCBS PF13517.6 ORF63308 - 4.2e-07 30.5 11.2 2.7e-05 24.6 2.5 3.6 1 1 3 4 4 4 4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella FG-GAP PF01839.23 ORF63308 - 0.00012 22.2 2.8 0.00091 19.3 0.0 2.8 3 0 0 3 3 3 1 FG-GAP repeat AnmK PF03702.14 ORF63181 - 2.1e-178 593.0 0.1 2.3e-178 592.9 0.1 1.0 1 0 0 1 1 1 1 Anhydro-N-acetylmuramic acid kinase FGGY_C PF02782.16 ORF63181 - 0.1 12.3 0.1 0.2 11.4 0.1 1.5 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain WD40 PF00400.32 ORF62688 - 2.9e-12 46.9 4.1 0.0016 19.2 0.0 5.7 5 1 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF62688 - 4e-09 36.7 0.2 3.9e-05 23.9 0.0 3.6 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF62688 - 1.4e-06 27.5 0.1 0.032 13.2 0.0 2.3 2 0 0 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Spaetzle PF16077.5 ORF62688 - 0.032 14.8 0.6 0.092 13.3 0.2 1.9 2 0 0 2 2 2 0 Spaetzle Torus PF16131.5 ORF55897 - 5.3e-09 36.8 0.3 1.3e-08 35.5 0.3 1.6 1 0 0 1 1 1 1 Torus domain RRM_1 PF00076.22 ORF55897 - 1e-08 34.9 0.2 2.8e-08 33.5 0.2 1.8 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf_CCCH_4 PF18345.1 ORF55897 - 4.5e-07 29.7 4.2 1.5e-06 28.1 4.2 2.0 1 0 0 1 1 1 1 Zinc finger domain Nup35_RRM_2 PF14605.6 ORF55897 - 0.0003 20.7 0.0 0.00058 19.8 0.0 1.5 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif zf-CCCH_3 PF15663.5 ORF55897 - 0.00065 19.9 0.3 0.0021 18.3 0.3 1.8 1 0 0 1 1 1 1 Zinc-finger containing family RRM_3 PF08777.11 ORF55897 - 0.0011 18.9 0.1 0.0039 17.2 0.1 1.9 1 0 0 1 1 1 1 RNA binding motif zf-CCCH PF00642.24 ORF55897 - 0.0023 17.8 2.6 0.0023 17.8 2.6 2.5 3 0 0 3 3 3 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF55897 - 0.0043 16.8 4.0 0.0085 15.9 4.0 1.5 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_2 PF14608.6 ORF55897 - 0.028 14.9 3.3 0.085 13.4 3.3 1.9 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger RNA_bind PF08675.11 ORF55897 - 0.038 14.0 0.0 0.091 12.8 0.0 1.6 1 0 0 1 1 1 0 RNA binding domain Syntaxin_2 PF14523.6 ORF55897 - 0.35 11.3 0.0 0.35 11.3 0.0 2.5 3 0 0 3 3 3 0 Syntaxin-like protein MFS_1 PF07690.16 ORF42669 - 4.6e-20 71.8 41.5 5.7e-14 51.8 23.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF42669 - 4.8e-09 36.0 14.8 7.8e-09 35.3 14.8 1.3 1 1 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MARVEL PF01284.23 ORF42669 - 0.00043 20.3 0.8 0.00043 20.3 0.8 3.9 2 2 2 4 4 4 1 Membrane-associating domain ATG22 PF11700.8 ORF42669 - 0.93 8.0 7.2 0.045 12.4 0.7 2.1 2 1 1 3 3 3 0 Vacuole effluxer Atg22 like TFA2_Winged_2 PF18121.1 ORF41881 - 0.043 13.5 2.5 0.056 13.1 0.9 2.1 2 0 0 2 2 2 0 TFA2 Winged helix domain 2 EF-hand_7 PF13499.6 ORF41881 - 0.92 10.0 9.4 0.29 11.6 2.2 3.3 3 1 0 3 3 3 0 EF-hand domain pair DUF885 PF05960.11 ORF41881 - 1.7 8.2 6.9 2.9 7.4 6.9 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) Golgin_A5 PF09787.9 ORF41881 - 3.1 7.2 30.2 9.3 5.6 11.8 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 Baculo_PEP_C PF04513.12 ORF41881 - 4.5 7.3 15.6 0.69 10.0 6.3 3.2 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Transglut_i_TM PF14400.6 ORF41881 - 5.5 7.0 11.2 0.49 10.4 1.7 2.4 2 1 0 2 2 2 0 Inactive transglutaminase fused to 7 transmembrane helices HIP1_clath_bdg PF16515.5 ORF41881 - 6.4 7.5 32.1 5.3 7.7 9.3 4.2 2 1 2 4 4 4 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Acetyltransf_16 PF05301.11 ORF38685 - 1.3e-46 158.6 0.6 2.1e-46 157.9 0.6 1.4 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 Acetyltransf_7 PF13508.7 ORF38685 - 0.015 15.7 0.0 0.061 13.8 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF38685 - 0.024 14.6 0.0 0.082 12.9 0.0 1.8 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain ELO PF01151.18 ORF36329 - 4.6e-34 118.1 18.3 8.4e-34 117.2 18.3 1.4 1 0 0 1 1 1 1 GNS1/SUR4 family Aldo_ket_red PF00248.21 ORF3579 - 4.6e-55 186.9 0.1 5.2e-55 186.7 0.1 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF3606 PF12244.8 ORF3579 - 0.049 13.6 0.0 0.46 10.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3606) Atg29_N PF18388.1 ORF3579 - 0.16 11.8 0.4 0.44 10.4 0.1 1.9 2 0 0 2 2 2 0 Atg29 N-terminal domain ADH_zinc_N PF00107.26 ORF33939 - 3.2e-23 82.1 0.1 5.7e-23 81.3 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF33939 - 8e-23 80.4 1.9 1.9e-22 79.2 1.9 1.7 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain AlaDh_PNT_C PF01262.21 ORF33939 - 9.9e-05 21.7 0.3 0.00015 21.1 0.3 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Glu_dehyd_C PF16912.5 ORF33939 - 0.00048 19.7 0.8 0.0017 17.8 0.8 1.9 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF33939 - 0.0035 18.4 0.0 0.0058 17.7 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.14 ORF33939 - 0.019 14.6 2.8 0.047 13.3 2.8 1.7 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ADH_N_2 PF16884.5 ORF33939 - 0.041 13.8 0.0 0.08 12.9 0.0 1.5 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase 2-Hacid_dh_C PF02826.19 ORF33939 - 0.07 12.5 0.3 0.12 11.7 0.3 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HECT PF00632.25 ORF3126 - 5.6e-58 196.8 0.0 7e-58 196.5 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Sulfate_transp PF00916.20 ORF27647 - 2e-11 43.3 0.2 3.8e-11 42.4 0.0 1.4 2 0 0 2 2 2 1 Sulfate permease family Xan_ur_permease PF00860.20 ORF27647 - 0.0092 14.7 0.2 0.0092 14.7 0.2 2.2 1 1 1 2 2 2 1 Permease family STAS PF01740.21 ORF27647 - 0.09 12.4 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 STAS domain Abhydrolase_1 PF00561.20 ORF26955 - 1.9e-30 106.4 0.0 3e-30 105.7 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF26955 - 5e-11 42.3 0.1 6.5e-11 41.9 0.1 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2048 PF09752.9 ORF26955 - 0.00029 20.1 0.0 0.34 10.0 0.0 2.1 2 0 0 2 2 2 2 Abhydrolase domain containing 18 Peptidase_S9 PF00326.21 ORF26955 - 0.042 13.3 0.2 4.3 6.8 0.0 2.4 2 1 0 2 2 2 0 Prolyl oligopeptidase family CTP-dep_RFKase PF01982.16 ORF26955 - 0.054 13.6 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function DUF120 YchF-GTPase_C PF06071.13 ORF23671 - 1.1e-39 134.5 0.3 2.2e-39 133.5 0.3 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 ORF23671 - 1.7e-06 28.1 0.3 6.9e-06 26.1 0.3 2.2 1 1 0 1 1 1 1 50S ribosome-binding GTPase DHHC PF01529.20 ORF21237 - 2.5e-30 105.3 12.6 2.5e-30 105.3 12.6 2.2 2 0 0 2 2 2 1 DHHC palmitoyltransferase SHE3 PF17078.5 ORF148068 - 0.13 12.0 0.3 0.41 10.3 0.1 2.0 2 0 0 2 2 2 0 SWI5-dependent HO expression protein 3 TSC22 PF01166.18 ORF148068 - 0.13 12.6 2.0 0.61 10.4 1.1 2.4 2 0 0 2 2 2 0 TSC-22/dip/bun family FtsX_ECD PF18075.1 ORF148068 - 0.14 12.8 1.8 0.93 10.2 0.0 2.6 2 1 0 2 2 2 0 FtsX extracellular domain GAT PF03127.14 ORF148068 - 0.47 10.8 3.5 7.3 7.0 0.4 2.9 2 1 0 2 2 2 0 GAT domain HAUS6_N PF14661.6 ORF148068 - 0.72 9.4 8.0 2.1 7.9 4.1 2.9 3 0 0 3 3 3 0 HAUS augmin-like complex subunit 6 N-terminus Spc7 PF08317.11 ORF148068 - 3.4 6.5 9.8 0.35 9.7 3.7 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein T7SS_ESX_EspC PF10824.8 ORF148068 - 5.2 7.6 12.5 24 5.5 0.8 4.1 2 1 2 4 4 4 0 Excreted virulence factor EspC, type VII ESX diderm Sel1 PF08238.12 ORF142010 - 9.9e-15 54.7 9.1 0.0094 16.6 1.6 5.5 5 0 0 5 5 5 4 Sel1 repeat Baculo_PEP_C PF04513.12 ORF140568 - 0.0046 17.0 8.5 0.66 10.0 0.3 3.2 2 1 1 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus DUF2433 PF10360.9 ORF140568 - 0.021 14.9 0.6 0.079 13.1 0.6 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) XhlA PF10779.9 ORF140568 - 0.08 13.2 0.2 0.08 13.2 0.2 5.2 6 1 0 6 6 6 0 Haemolysin XhlA Fzo_mitofusin PF04799.13 ORF140568 - 0.7 9.4 6.0 1.6 8.3 1.6 2.7 2 0 0 2 2 2 0 fzo-like conserved region DUF1664 PF07889.12 ORF140568 - 4.6 7.3 11.4 2 8.5 5.0 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) TPR_16 PF13432.6 ORF136163 - 0.00091 19.8 7.0 0.0033 18.0 1.8 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF136163 - 0.0016 18.4 5.0 1.1 9.5 0.4 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF136163 - 0.002 17.8 0.7 2.9 7.9 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat P_C10 PF14974.6 ORF136163 - 0.029 14.5 0.0 0.065 13.3 0.0 1.6 1 0 0 1 1 1 0 Protein C10 GvpO PF05800.11 ORF136163 - 0.038 14.0 0.0 0.13 12.3 0.0 2.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpO DUF4028 PF13220.6 ORF136163 - 0.1 12.4 0.0 0.35 10.7 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF4028) CTP_transf_like PF01467.26 ORF128365 - 0.0004 20.6 0.1 0.00085 19.5 0.1 1.6 1 0 0 1 1 1 1 Cytidylyltransferase-like ABC_tran PF00005.27 ORF12738 - 3.9e-29 101.9 0.1 6.3e-29 101.2 0.1 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF12738 - 7.6e-06 25.5 6.6 5.3e-05 22.8 0.5 2.5 2 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain ABC_membrane PF00664.23 ORF12738 - 0.00084 19.1 0.3 0.0014 18.3 0.3 1.4 1 0 0 1 1 1 1 ABC transporter transmembrane region MMR_HSR1 PF01926.23 ORF12738 - 0.0091 16.1 0.3 0.024 14.7 0.1 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF12738 - 0.015 15.2 0.0 0.031 14.2 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase BNR_assoc_N PF14873.6 ORF12738 - 0.033 13.9 0.0 0.062 13.0 0.0 1.4 1 0 0 1 1 1 0 N-terminal domain of BNR-repeat neuraminidase AAA_29 PF13555.6 ORF12738 - 0.067 12.9 0.1 0.34 10.7 0.1 2.1 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_7 PF12775.7 ORF12738 - 0.076 12.5 0.1 0.45 10.0 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 ORF12738 - 0.14 11.9 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain Aldo_ket_red PF00248.21 ORF126818 - 5.3e-56 190.0 0.0 6.1e-56 189.8 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family RINGv PF12906.7 ORF110601 - 0.0067 16.5 0.7 0.015 15.5 0.7 1.6 1 0 0 1 1 1 1 RING-variant domain TMEM223 PF14640.6 ORF110601 - 0.19 11.9 0.1 0.35 11.0 0.1 1.4 1 0 0 1 1 1 0 Transmembrane protein 223 zf-RING_2 PF13639.6 ORF110601 - 0.94 9.9 7.4 16 6.0 0.2 2.7 2 0 0 2 2 2 0 Ring finger domain HECT PF00632.25 ORF102480 - 5.6e-58 196.8 0.0 7e-58 196.5 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) NCA2 PF08637.10 NODE_15889_length_1114_cov_4.010195_g12033_i0reverse_frame_1 - 2.5 7.2 3.4 0.74 8.9 0.0 1.7 2 0 0 2 2 2 0 ATP synthase regulation protein NCA2 Oxidored_q6 PF01058.22 ORF98659 - 2.4e-32 111.5 1.4 3.5e-32 111.0 0.8 1.6 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.6 ORF98659 - 8.6e-27 93.3 8.4 1.3e-26 92.7 5.7 2.1 2 0 0 2 2 2 1 NiFe/NiFeSe hydrogenase small subunit C-terminal TAT_signal PF10518.9 ORF98659 - 0.00031 20.5 2.6 0.00031 20.5 2.6 3.6 3 1 1 4 4 4 1 TAT (twin-arginine translocation) pathway signal sequence XPG_I PF00867.18 ORF96617 - 1.1e-25 89.7 1.6 1.9e-25 89.0 0.1 2.2 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 ORF96617 - 1.3e-23 83.3 0.0 2.9e-23 82.3 0.0 1.6 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 ORF96617 - 0.00013 22.5 2.7 0.00061 20.3 0.0 2.7 3 0 0 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold GntR PF00392.21 ORF96617 - 0.0094 15.6 0.2 0.1 12.3 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HHH_5 PF14520.6 ORF96617 - 0.08 13.6 0.3 0.68 10.6 0.0 2.6 3 0 0 3 3 3 0 Helix-hairpin-helix domain EMC3_TMCO1 PF01956.16 ORF96617 - 1.8 8.3 7.7 0.24 11.1 0.8 2.5 2 1 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like IU_nuc_hydro PF01156.19 ORF95917 - 8.8e-39 133.9 0.0 1.1e-38 133.5 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase Glyco_transf_8 PF01501.20 ORF95428 - 0.062 12.8 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 8 Ntox1 PF15500.6 ORF94319 - 0.069 13.5 0.0 0.19 12.1 0.0 1.7 1 0 0 1 1 1 0 Putative RNase-like toxin, toxin_1 Methyltransf_31 PF13847.6 ORF91189 - 3.3e-26 91.9 0.1 5.3e-26 91.2 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF91189 - 1.5e-12 48.1 0.0 3.4e-12 46.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF91189 - 3.4e-10 40.4 0.0 7.3e-10 39.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF91189 - 5.9e-09 36.0 0.0 9.6e-09 35.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF91189 - 1.7e-07 31.9 0.2 3.9e-07 30.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF91189 - 5.7e-06 25.8 0.1 1.1e-05 24.9 0.1 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family DOT1 PF08123.13 ORF91189 - 0.00062 19.4 0.3 0.0012 18.4 0.3 1.4 1 0 0 1 1 1 1 Histone methylation protein DOT1 PCMT PF01135.19 ORF91189 - 0.00077 19.3 0.0 0.0013 18.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF2670 PF10875.8 ORF91189 - 0.038 14.1 0.0 0.085 13.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) EamA PF00892.20 ORF90416 - 1.6e-11 44.6 33.9 5.6e-09 36.3 10.5 2.6 2 1 0 2 2 2 2 EamA-like transporter family DUF4355 PF14265.6 ORF86833 - 0.052 13.8 7.4 0.11 12.7 7.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4355) DinB_2 PF12867.7 ORF86833 - 1.4 9.4 6.5 3.3 8.2 1.6 2.8 2 1 0 2 2 2 0 DinB superfamily Ephrin_rec_like PF07699.13 ORF81895 - 0.0016 18.1 14.2 0.0091 15.7 14.2 2.2 1 1 0 1 1 1 1 Putative ephrin-receptor like Peripla_BP_6 PF13458.6 ORF81269 - 7.7e-56 190.2 6.7 9.1e-56 190.0 6.7 1.0 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 ORF81269 - 4.5e-26 91.8 0.0 8.6e-26 90.9 0.0 1.4 1 1 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 ORF81269 - 1.1e-18 67.5 0.1 1.3e-18 67.2 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain PGM_PMM_I PF02878.16 ORF81269 - 0.0044 16.7 0.2 0.42 10.3 0.0 2.4 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Fe-ADH PF00465.19 ORF81269 - 0.0049 15.7 0.0 0.0087 14.9 0.0 1.3 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Apolipoprotein PF01442.18 ORF80569 - 4.1e-05 23.5 14.0 0.00021 21.3 12.6 2.1 2 0 0 2 2 2 1 Apolipoprotein A1/A4/E domain ApoLp-III PF07464.11 ORF80569 - 0.0019 18.3 15.5 0.72 9.9 10.0 3.2 2 1 1 3 3 3 2 Apolipophorin-III precursor (apoLp-III) HMMR_N PF15905.5 ORF80569 - 0.0022 17.6 19.4 0.0022 17.6 19.4 3.0 1 1 2 3 3 3 1 Hyaluronan mediated motility receptor N-terminal CENP-H PF05837.12 ORF80569 - 0.0042 17.5 10.3 0.0042 17.5 10.3 3.3 2 1 1 3 3 3 1 Centromere protein H (CENP-H) KMP11 PF03037.16 ORF80569 - 0.0044 17.8 4.6 0.0044 17.8 4.6 3.5 2 2 1 3 3 2 1 Kinetoplastid membrane protein 11 DUF4407 PF14362.6 ORF80569 - 0.0053 16.1 11.2 0.0053 16.1 11.2 2.0 1 1 0 2 2 2 1 Domain of unknown function (DUF4407) PilJ PF13675.6 ORF80569 - 0.0079 16.2 2.2 0.031 14.3 0.2 2.4 1 1 1 2 2 2 1 Type IV pili methyl-accepting chemotaxis transducer N-term TelA PF05816.11 ORF80569 - 0.016 14.3 20.8 0.13 11.3 18.7 2.3 2 1 0 2 2 2 0 Toxic anion resistance protein (TelA) Snapin_Pallidin PF14712.6 ORF80569 - 0.053 13.9 24.9 0.083 13.3 8.2 4.4 3 2 1 5 5 4 0 Snapin/Pallidin CorA PF01544.18 ORF80569 - 0.065 12.5 17.8 0.044 13.1 8.4 2.9 1 1 2 3 3 3 0 CorA-like Mg2+ transporter protein EzrA PF06160.12 ORF80569 - 0.13 10.4 31.2 0.061 11.5 23.6 2.5 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA Baculo_PEP_C PF04513.12 ORF80569 - 0.17 11.9 10.7 1.1 9.3 0.4 3.1 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Laminin_II PF06009.12 ORF80569 - 0.18 11.8 18.7 1.2 9.2 7.4 3.3 2 1 1 3 3 3 0 Laminin Domain II KxDL PF10241.9 ORF80569 - 0.25 11.7 18.7 0.31 11.4 2.8 3.7 2 1 2 4 4 4 0 Uncharacterized conserved protein YtxH PF12732.7 ORF80569 - 0.31 11.6 14.4 48 4.6 0.1 4.0 2 1 0 2 2 2 0 YtxH-like protein DUF1993 PF09351.10 ORF80569 - 0.34 11.1 2.4 0.86 9.7 1.8 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1993) Val_tRNA-synt_C PF10458.9 ORF80569 - 0.34 11.2 13.2 0.57 10.5 0.9 4.2 3 1 1 4 4 3 0 Valyl tRNA synthetase tRNA binding arm DUF1664 PF07889.12 ORF80569 - 0.41 10.7 19.1 1.2 9.1 7.1 3.5 2 1 2 4 4 4 0 Protein of unknown function (DUF1664) DUF2935 PF11155.8 ORF80569 - 0.5 10.7 13.4 4.3 7.7 8.2 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF2935) PMC2NT PF08066.12 ORF80569 - 0.86 10.3 14.9 0.76 10.5 2.9 3.9 3 1 1 4 4 4 0 PMC2NT (NUC016) domain WDCP PF15390.6 ORF80569 - 0.96 7.8 12.8 1.2 7.4 12.8 1.2 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Exonuc_VII_L PF02601.15 ORF80569 - 1.6 8.2 19.8 34 3.9 20.0 2.3 1 1 0 1 1 1 0 Exonuclease VII, large subunit GCK PF07802.11 ORF80569 - 1.8 9.1 6.6 0.51 10.8 0.9 2.7 2 0 0 2 2 2 0 GCK domain COX17 PF05051.13 ORF80569 - 2.1 8.7 7.1 0.27 11.6 1.2 2.5 2 0 0 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) DUF2524 PF10732.9 ORF80569 - 3.1 8.2 18.2 0.62 10.4 9.0 3.4 2 1 1 3 3 3 0 Protein of unknown function (DUF2524) ZnuA PF01297.17 ORF80569 - 3.2 7.1 10.9 0.55 9.6 0.7 2.6 2 1 1 3 3 2 0 Zinc-uptake complex component A periplasmic DUF2203 PF09969.9 ORF80569 - 3.7 8.3 13.2 4.1 8.1 4.3 3.1 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) SlyX PF04102.12 ORF80569 - 3.7 8.2 21.5 0.7 10.5 2.3 5.0 2 1 3 5 5 4 0 SlyX DUF148 PF02520.17 ORF80569 - 3.9 7.6 19.4 0.28 11.3 8.8 3.5 3 1 1 4 4 4 0 Domain of unknown function DUF148 P4Ha_N PF08336.11 ORF80569 - 4.4 7.3 17.2 0.24 11.4 3.7 3.7 1 1 0 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Phage_GPO PF05929.11 ORF80569 - 4.6 6.8 19.9 2.2 7.8 5.4 2.9 1 1 2 3 3 3 0 Phage capsid scaffolding protein (GPO) serine peptidase Stc1 PF12898.7 ORF80569 - 4.7 7.8 12.0 0.98 10.0 1.8 3.4 3 1 0 3 3 2 0 Stc1 domain DUF1465 PF07323.12 ORF80569 - 5 6.9 9.0 0.84 9.5 1.5 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1465) DUF2205 PF10224.9 ORF80569 - 6.3 6.9 17.2 0.13 12.3 6.6 3.2 3 1 0 3 3 3 0 Short coiled-coil protein DUF4416 PF14385.6 ORF80569 - 6.6 6.6 9.5 0.43 10.5 1.2 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4416) Bac_rhamnosid6H PF17389.2 ORF80569 - 6.9 5.8 5.8 1.8 7.7 1.0 2.1 2 1 0 3 3 2 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DUF16 PF01519.16 ORF80569 - 7.2 7.2 29.7 0.49 10.9 12.0 4.2 1 1 3 4 4 4 0 Protein of unknown function DUF16 TipAS PF07739.13 ORF80569 - 8.4 7.0 10.7 2.1 8.9 2.7 3.1 1 1 2 3 3 3 0 TipAS antibiotic-recognition domain PI3_PI4_kinase PF00454.27 ORF74437 - 2e-24 86.8 2.5 7.3e-22 78.4 0.3 2.5 2 1 1 3 3 3 2 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 ORF74437 - 0.0077 15.6 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4135) PilN PF05137.13 ORF73081 - 3e-08 33.7 1.1 9.5e-08 32.1 0.1 2.0 2 0 0 2 2 2 1 Fimbrial assembly protein (PilN) Bystin PF05291.11 ORF7287 - 2.7e-113 378.1 0.1 3.5e-113 377.8 0.1 1.0 1 0 0 1 1 1 1 Bystin EIN3 PF04873.13 ORF64444 - 0.22 10.8 0.8 0.33 10.2 0.8 1.2 1 0 0 1 1 1 0 Ethylene insensitive 3 Leucyl-specific PF14795.6 ORF59518 - 0.00059 19.8 1.1 0.21 11.7 0.0 3.3 3 0 0 3 3 3 1 Leucine-tRNA synthetase-specific domain PY_rept_46 PF09689.10 ORF59518 - 1.1 9.9 5.1 0.85 10.2 0.2 2.6 3 0 0 3 3 3 0 Plasmodium yoelii repeat (PY_rept_46) Fer4 PF00037.27 ORF53711 - 5.7 6.9 47.4 0.67 9.9 0.8 9.1 8 0 0 8 8 8 0 4Fe-4S binding domain TPR_2 PF07719.17 ORF53563 - 8e-07 28.7 0.0 0.015 15.3 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF53563 - 6e-06 25.9 0.1 0.0017 18.1 0.0 3.4 3 1 0 3 3 3 1 Tetratricopeptide repeat eIF3_subunit PF08597.10 ORF53563 - 0.0084 16.0 0.3 0.015 15.2 0.3 1.4 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit Fis1_TPR_C PF14853.6 ORF53563 - 0.092 12.8 0.1 0.42 10.7 0.0 2.1 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_14 PF13428.6 ORF53563 - 0.17 12.8 0.0 9.5 7.3 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat Iso_dh PF00180.20 ORF52736 - 1.8e-59 201.7 0.0 4.4e-59 200.4 0.0 1.6 1 1 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Gly-zipper_Omp PF13488.6 ORF52736 - 2.5 8.2 7.9 4.4 7.4 7.9 1.3 1 0 0 1 1 1 0 Glycine zipper Fer4 PF00037.27 ORF5192 - 5.7 6.9 47.4 0.67 9.9 0.8 9.1 8 0 0 8 8 8 0 4Fe-4S binding domain Ank_2 PF12796.7 ORF50490 - 1.7e-08 34.9 0.1 8.2e-05 23.1 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF50490 - 2.2e-07 31.3 0.1 4.4e-05 24.0 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF50490 - 5.7e-05 23.2 3.2 0.00077 19.7 0.0 3.3 3 0 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 ORF50490 - 6.5e-05 23.2 0.6 0.015 15.7 0.0 2.8 2 1 0 2 2 2 1 Ankyrin repeat PHBC_N PF12551.8 ORF50490 - 0.0023 17.7 1.1 0.02 14.6 0.2 2.3 2 0 0 2 2 2 1 Poly-beta-hydroxybutyrate polymerase N terminal Ank_5 PF13857.6 ORF50490 - 0.02 15.2 0.1 0.02 15.2 0.1 3.6 3 1 1 4 4 4 0 Ankyrin repeats (many copies) zf-RING_2 PF13639.6 ORF43012 - 2.5e-11 43.7 8.0 2.5e-11 43.7 8.0 3.0 3 1 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF43012 - 3.8e-07 29.7 7.9 3.8e-07 29.7 7.9 2.9 3 0 0 3 3 3 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF43012 - 1.4e-05 25.3 9.0 9.3e-05 22.6 9.0 2.4 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF43012 - 1.8e-05 24.5 7.3 1.8e-05 24.5 7.3 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF43012 - 0.00022 21.0 4.2 0.0009 19.1 4.2 2.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF43012 - 0.0032 17.4 6.7 0.01 15.8 6.7 1.9 1 0 0 1 1 1 1 zinc-RING finger domain FA_desaturase PF00487.24 ORF43012 - 0.15 11.9 3.0 0.32 10.8 0.4 2.0 2 0 0 2 2 2 0 Fatty acid desaturase Pex24p PF06398.11 ORF43012 - 4.6 6.1 6.0 0.76 8.7 2.2 1.6 1 1 1 2 2 2 0 Integral peroxisomal membrane peroxin zf-ANAPC11 PF12861.7 ORF43012 - 6.5 6.9 10.6 0.66 10.1 4.6 2.5 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger MFS_1 PF07690.16 ORF4165 - 3.6e-05 22.9 23.2 3.6e-05 22.9 23.2 2.0 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF4165 - 0.028 13.3 19.7 0.092 11.6 11.3 2.9 3 0 0 3 3 3 0 Sugar (and other) transporter MFS_1 PF07690.16 ORF33017 - 4.8e-21 75.1 52.9 2.4e-17 62.9 24.8 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF33017 - 0.00024 19.6 0.6 0.00031 19.3 0.6 1.2 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_1_like PF12832.7 ORF33017 - 0.066 12.1 17.4 0.17 10.7 8.3 2.3 1 1 1 2 2 2 0 MFS_1 like family Sugar_tr PF00083.24 ORF33017 - 0.082 11.7 29.6 0.022 13.6 1.1 3.7 2 2 2 4 4 4 0 Sugar (and other) transporter Pam17 PF08566.10 ORF33017 - 0.13 12.1 2.7 2.5 7.9 0.1 2.4 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 TrbE PF11100.8 ORF33017 - 2.4 8.5 10.6 3.2 8.1 1.3 3.8 3 0 0 3 3 3 0 Conjugal transfer protein TrbE Zn_peptidase_2 PF04298.12 ORF31121 - 0.08 12.3 0.2 0.12 11.8 0.2 1.2 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase DUF22 PF01629.16 ORF31121 - 0.1 12.3 0.4 7.2 6.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function DUF22 TPR_1 PF00515.28 ORF26756 - 1e-38 129.6 29.6 3.8e-08 32.8 0.5 9.2 8 2 0 8 8 8 8 Tetratricopeptide repeat TPR_2 PF07719.17 ORF26756 - 3.2e-38 126.8 15.5 5.3e-06 26.1 0.1 9.0 8 1 0 8 8 8 6 Tetratricopeptide repeat TPR_11 PF13414.6 ORF26756 - 4.1e-35 119.2 19.1 7e-09 35.2 0.1 8.1 3 2 5 8 8 8 7 TPR repeat TPR_17 PF13431.6 ORF26756 - 2e-27 93.5 21.5 7.9e-07 29.0 0.5 7.6 8 0 0 8 8 7 6 Tetratricopeptide repeat TPR_8 PF13181.6 ORF26756 - 1e-24 84.6 26.5 0.00014 21.8 0.1 8.3 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_12 PF13424.6 ORF26756 - 9e-24 83.6 10.8 1e-08 35.4 0.1 6.5 2 1 5 7 7 7 5 Tetratricopeptide repeat TPR_7 PF13176.6 ORF26756 - 1.6e-22 77.8 7.5 0.021 14.8 0.0 8.7 8 1 0 8 8 8 5 Tetratricopeptide repeat TPR_19 PF14559.6 ORF26756 - 1e-21 77.2 9.6 4.1e-05 24.0 0.5 6.4 1 1 6 7 7 7 6 Tetratricopeptide repeat TPR_6 PF13174.6 ORF26756 - 2.3e-17 62.4 8.5 0.021 15.4 0.3 7.9 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_14 PF13428.6 ORF26756 - 2.8e-17 61.9 0.1 0.12 13.2 0.0 7.8 3 2 5 8 8 8 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF26756 - 1.4e-14 54.4 0.0 0.00028 21.5 0.0 5.3 2 2 4 6 6 6 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF26756 - 2.1e-14 52.8 10.3 0.02 14.7 0.1 7.7 8 1 0 8 8 8 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF26756 - 9.4e-11 41.8 14.4 0.00033 20.8 1.6 4.4 1 1 4 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_MalT PF17874.1 ORF26756 - 1.5e-08 34.4 0.2 0.00025 20.5 0.0 3.9 2 1 1 3 3 3 1 MalT-like TPR region TPR_9 PF13371.6 ORF26756 - 5.6e-08 32.8 0.0 0.0083 16.3 0.0 4.1 2 2 2 4 4 4 2 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF26756 - 1.3e-06 28.1 10.9 0.014 14.8 0.9 4.1 1 1 3 4 4 4 3 Coatomer epsilon subunit TPR_15 PF13429.6 ORF26756 - 1.7e-06 27.4 0.7 0.00043 19.6 0.5 2.9 1 1 1 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF26756 - 2.8e-05 24.1 16.0 1.6 8.8 0.1 6.8 4 3 4 8 8 8 2 Fis1 C-terminal tetratricopeptide repeat Sel1 PF08238.12 ORF26756 - 0.00021 21.8 2.4 8 7.3 0.0 5.2 6 0 0 6 6 4 0 Sel1 repeat MIT PF04212.18 ORF26756 - 0.0095 16.0 23.0 0.16 12.1 0.1 7.1 6 1 1 7 7 7 1 MIT (microtubule interacting and transport) domain PPR PF01535.20 ORF26756 - 0.023 14.9 8.3 0.88 10.0 0.0 6.2 8 0 0 8 8 6 0 PPR repeat BTAD PF03704.17 ORF26756 - 0.088 13.2 0.1 6.6 7.2 0.0 3.2 3 0 0 3 3 3 0 Bacterial transcriptional activator domain TPR_4 PF07721.14 ORF26756 - 0.12 13.0 0.0 23 6.0 0.0 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat RFC1 PF08519.12 ORF138299 - 2e-38 132.0 0.3 6.7e-38 130.3 0.0 2.0 2 0 0 2 2 2 1 Replication factor RFC1 C terminal domain PBP1_TM PF14812.6 ORF138299 - 1.4 9.3 7.3 3.2 8.2 7.3 1.6 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal MFS_1 PF07690.16 ORF131571 - 2.4e-18 66.2 37.3 7.6e-17 61.3 27.7 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Fst_toxin PF13955.6 ORF131571 - 0.052 13.5 0.3 0.14 12.1 0.3 1.7 1 0 0 1 1 1 0 Toxin Fst, type I toxin-antitoxin system DUF2070 PF09843.9 ORF131571 - 8.2 4.6 6.2 14 3.8 6.2 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) BPD_transp_1 PF00528.22 ORF117997 - 1.9e-44 151.6 9.9 1.9e-44 151.6 9.9 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Renin_r PF07850.14 ORF117997 - 0.094 13.3 0.5 0.094 13.3 0.5 2.1 3 0 0 3 3 3 0 Renin receptor-like protein DUF3021 PF11457.8 ORF117997 - 3.2 8.1 11.5 3.9 7.8 1.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3021) Ank_2 PF12796.7 ORF114652 - 3.6e-30 104.4 7.9 1e-09 38.9 0.3 3.6 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF114652 - 4.4e-20 71.8 1.6 6.8e-06 26.5 0.1 5.9 2 2 4 6 6 6 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF114652 - 7.6e-15 53.5 4.0 0.31 11.7 0.1 6.8 6 0 0 6 6 6 4 Ankyrin repeat Ank PF00023.30 ORF114652 - 9.7e-14 51.1 11.0 0.22 12.0 0.0 7.4 7 1 0 7 7 7 5 Ankyrin repeat Ank_5 PF13857.6 ORF114652 - 1.5e-12 47.5 5.3 0.00077 19.7 0.0 4.8 2 2 3 5 5 5 5 Ankyrin repeats (many copies) MFS_1 PF07690.16 ORF113257 - 9e-23 80.8 15.8 1.2e-16 60.6 15.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF113257 - 0.00026 20.0 0.2 0.00026 20.0 0.2 3.7 1 1 3 4 4 4 2 Sugar (and other) transporter MFS_3 PF05977.13 ORF113257 - 0.045 12.2 1.1 0.099 11.0 1.1 1.7 1 1 0 1 1 1 0 Transmembrane secretion effector DUF898 PF05987.13 ORF113257 - 0.17 10.9 5.7 0.2 10.6 3.5 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF898) PI3_PI4_kinase PF00454.27 ORF108521 - 2e-24 86.8 2.5 7.3e-22 78.4 0.3 2.5 2 1 1 3 3 3 2 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 ORF108521 - 0.0077 15.6 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4135) Gamma_PGA_hydro PF05908.11 ORF105762 - 0.015 14.7 0.0 0.032 13.6 0.0 1.5 1 0 0 1 1 1 0 Poly-gamma-glutamate hydrolase IF2_N PF04760.15 ORF105762 - 0.1 12.4 0.1 0.3 10.9 0.1 1.8 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region PP2C PF00481.21 ORF103520 - 2.3e-36 125.8 0.0 2.8e-36 125.5 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF103520 - 3.9e-07 29.9 0.2 2e-06 27.6 0.2 1.9 1 1 0 1 1 1 1 Protein phosphatase 2C CRAL_TRIO PF00650.20 ORF98390 - 2.2e-30 105.5 0.3 3.4e-30 104.9 0.3 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF98390 - 2.3e-05 24.5 0.2 8.5e-05 22.7 0.2 1.9 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain CRAL_TRIO_2 PF13716.6 ORF98390 - 5e-05 23.5 0.0 9.9e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DiS_P_DiS PF06750.13 ORF89938 - 0.13 12.4 3.4 0.57 10.3 0.3 2.6 2 0 0 2 2 2 0 Bacterial Peptidase A24 N-terminal domain Filament PF00038.21 ORF78066 - 7.5e-08 32.3 4.6 0.002 17.8 0.2 2.2 2 0 0 2 2 2 2 Intermediate filament protein ATG16 PF08614.11 ORF78066 - 0.00011 22.6 8.2 0.00012 22.3 0.5 3.1 1 1 1 3 3 3 1 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 ORF78066 - 0.0003 20.7 3.0 3.9 7.5 0.1 4.8 4 2 2 6 6 5 1 TATA element modulatory factor 1 DNA binding Fez1 PF06818.15 ORF78066 - 0.00044 20.7 0.8 0.2 12.1 0.0 2.3 2 0 0 2 2 2 1 Fez1 Atg14 PF10186.9 ORF78066 - 0.0026 16.9 4.5 0.16 11.0 0.7 2.1 2 0 0 2 2 2 2 Vacuolar sorting 38 and autophagy-related subunit 14 ADIP PF11559.8 ORF78066 - 0.0027 17.8 5.3 0.33 11.0 0.7 2.8 2 1 0 2 2 2 2 Afadin- and alpha -actinin-Binding ZapB PF06005.12 ORF78066 - 0.0027 18.1 1.4 9 6.8 0.0 4.3 5 1 0 5 5 4 0 Cell division protein ZapB TPR_MLP1_2 PF07926.12 ORF78066 - 0.003 17.6 3.7 0.18 11.9 0.2 2.9 2 1 0 2 2 2 1 TPR/MLP1/MLP2-like protein FlaC_arch PF05377.11 ORF78066 - 0.0036 17.6 0.6 71 3.9 0.0 5.1 6 0 0 6 6 4 0 Flagella accessory protein C (FlaC) APG6_N PF17675.1 ORF78066 - 0.0044 17.6 1.8 0.85 10.2 0.1 2.8 2 2 0 2 2 2 1 Apg6 coiled-coil region Spc7 PF08317.11 ORF78066 - 0.0049 15.8 4.4 0.5 9.2 0.2 2.5 2 1 0 2 2 2 2 Spc7 kinetochore protein CC2-LZ PF16516.5 ORF78066 - 0.0064 16.8 3.2 0.64 10.4 0.8 2.7 2 0 0 2 2 2 1 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Rootletin PF15035.6 ORF78066 - 0.0086 16.1 2.0 1.1 9.2 0.1 2.3 2 1 0 2 2 2 1 Ciliary rootlet component, centrosome cohesion DUF641 PF04859.12 ORF78066 - 0.0099 16.2 0.2 9.4 6.6 0.0 3.3 1 1 1 3 3 3 0 Plant protein of unknown function (DUF641) HBM PF16591.5 ORF78066 - 0.012 15.1 4.4 0.47 9.8 0.6 2.5 2 0 0 2 2 2 0 Helical bimodular sensor domain Yuri_gagarin PF15934.5 ORF78066 - 0.017 15.0 0.4 0.017 15.0 0.4 2.2 2 1 0 2 2 2 0 Yuri gagarin DUF1640 PF07798.11 ORF78066 - 0.019 15.0 0.7 0.18 11.9 0.5 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) DUF3450 PF11932.8 ORF78066 - 0.021 14.1 5.8 0.079 12.3 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF4201 PF13870.6 ORF78066 - 0.027 14.2 0.7 9.1 6.0 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4201) Sec34 PF04136.15 ORF78066 - 0.037 13.9 1.7 7.5 6.4 0.3 3.2 2 1 1 3 3 3 0 Sec34-like family CENP-F_leu_zip PF10473.9 ORF78066 - 0.042 13.9 0.4 2.3 8.2 0.1 2.9 2 2 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Jnk-SapK_ap_N PF09744.9 ORF78066 - 0.045 14.0 0.4 1.3 9.3 0.0 2.5 2 1 0 2 2 2 0 JNK_SAPK-associated protein-1 HIP1_clath_bdg PF16515.5 ORF78066 - 0.067 13.8 1.9 2.7 8.6 0.3 2.8 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DivIC PF04977.15 ORF78066 - 0.067 13.0 7.8 1.9 8.3 0.1 5.0 4 2 3 7 7 6 0 Septum formation initiator KASH_CCD PF14662.6 ORF78066 - 0.075 12.8 4.2 8.6 6.1 0.0 3.5 2 2 1 3 3 3 0 Coiled-coil region of CCDC155 or KASH CortBP2 PF09727.9 ORF78066 - 0.079 12.9 0.5 0.27 11.1 0.1 2.1 2 0 0 2 2 2 0 Cortactin-binding protein-2 CCDC92 PF14916.6 ORF78066 - 0.1 12.4 0.0 8.1 6.3 0.0 3.4 4 0 0 4 4 3 0 Coiled-coil domain of unknown function Lebercilin PF15619.6 ORF78066 - 0.12 12.0 1.5 6.3 6.4 0.0 2.7 2 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Halo_GVPC PF05465.13 ORF78066 - 0.13 12.6 7.3 4.1 7.7 1.4 3.3 2 1 1 3 3 2 0 Halobacterial gas vesicle protein C (GVPC) repeat YabA PF06156.13 ORF78066 - 0.15 12.7 2.0 9.4 6.9 0.1 3.6 3 1 1 4 4 3 0 Initiation control protein YabA UPF0242 PF06785.11 ORF78066 - 0.15 12.2 0.7 4.2 7.4 0.0 3.1 2 2 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus FlxA PF14282.6 ORF78066 - 0.2 11.7 1.0 3.3 7.8 0.1 2.8 3 0 0 3 3 3 0 FlxA-like protein Cnn_1N PF07989.11 ORF78066 - 0.2 11.8 1.5 25 5.1 0.0 3.8 3 1 0 3 3 3 0 Centrosomin N-terminal motif 1 HMMR_C PF15908.5 ORF78066 - 0.21 11.8 1.9 16 5.7 0.0 3.7 2 1 2 4 4 4 0 Hyaluronan mediated motility receptor C-terminal SHE3 PF17078.5 ORF78066 - 0.31 10.7 6.9 0.84 9.3 1.2 2.5 3 0 0 3 3 2 0 SWI5-dependent HO expression protein 3 Macoilin PF09726.9 ORF78066 - 0.38 9.2 6.8 0.1 11.2 0.9 2.1 1 1 0 2 2 2 0 Macoilin family MAD PF05557.13 ORF78066 - 0.47 8.8 2.8 2.8 6.2 0.2 2.2 2 0 0 2 2 2 0 Mitotic checkpoint protein DUF4376 PF14301.6 ORF78066 - 0.48 10.8 3.8 0.6 10.5 0.2 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4376) DUF1664 PF07889.12 ORF78066 - 0.48 10.5 3.0 17 5.5 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) DUF5082 PF16888.5 ORF78066 - 0.51 10.6 7.6 0.59 10.4 0.6 4.1 4 2 2 6 6 4 0 Domain of unknown function (DUF5082) DUF4407 PF14362.6 ORF78066 - 0.54 9.6 15.3 1.2 8.5 3.0 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Fib_alpha PF08702.10 ORF78066 - 0.63 10.2 2.5 6.9 6.9 0.0 3.1 2 2 1 3 3 3 0 Fibrinogen alpha/beta chain family CALCOCO1 PF07888.11 ORF78066 - 0.66 8.8 3.5 8.5 5.1 0.1 2.2 1 1 0 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like GatB_Yqey PF02637.18 ORF71401 - 2.1 8.2 10.4 1.1 9.1 0.2 3.0 4 0 0 4 4 4 0 GatB domain VWA PF00092.28 ORF71251 - 0.00018 21.8 0.0 0.00027 21.2 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain Med25_VWA PF11265.8 ORF71251 - 0.00019 21.3 0.0 0.00039 20.3 0.0 1.5 1 0 0 1 1 1 1 Mediator complex subunit 25 von Willebrand factor type A VWA_2 PF13519.6 ORF71251 - 0.001 19.7 0.0 0.0022 18.6 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain 3Beta_HSD PF01073.19 ORF65489 - 2.6e-24 85.7 0.0 3.4e-24 85.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF65489 - 7.9e-23 81.2 0.0 1.4e-22 80.4 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF65489 - 3.3e-18 66.2 0.0 4.5e-18 65.7 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF65489 - 1.4e-13 50.6 0.0 2.1e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF65489 - 7e-11 42.4 0.0 1.1e-10 41.7 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF65489 - 2.1e-10 40.2 0.0 3.4e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF65489 - 0.00028 20.8 0.0 0.0006 19.8 0.0 1.5 1 1 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 ORF65489 - 0.0096 15.0 0.0 0.018 14.1 0.0 1.5 1 1 0 1 1 1 1 RmlD substrate binding domain adh_short PF00106.25 ORF65489 - 0.01 15.3 0.0 0.041 13.3 0.0 1.8 2 0 0 2 2 2 0 short chain dehydrogenase DapB_N PF01113.20 ORF65489 - 0.054 13.6 0.1 0.82 9.8 0.0 2.2 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus NmrA PF05368.13 ORF65489 - 0.072 12.6 0.0 0.18 11.3 0.0 1.6 2 0 0 2 2 2 0 NmrA-like family Sacchrp_dh_NADP PF03435.18 ORF65489 - 0.13 12.5 0.0 0.59 10.4 0.0 2.0 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF1018 PF06252.12 ORF63116 - 0.00012 23.1 0.4 6.3 7.8 0.0 3.5 3 0 0 3 3 3 3 Protein of unknown function (DUF1018) DUF4322 PF14210.6 ORF63116 - 0.003 17.4 0.0 8.1 6.4 0.0 3.4 3 0 0 3 3 3 2 Domain of unknown function (DUF4322) TCL1_MTCP1 PF01840.17 ORF63116 - 0.0053 16.4 0.4 0.46 10.1 0.0 2.7 3 0 0 3 3 3 1 TCL1/MTCP1 family Ribosomal_L37 PF08561.10 ORF63116 - 0.014 15.9 0.9 0.34 11.5 0.1 2.5 2 1 0 2 2 2 0 Mitochondrial ribosomal protein L37 PfkB PF00294.24 ORF5886 - 6.2e-29 101.2 0.2 1.1e-27 97.1 0.2 2.0 1 1 0 1 1 1 1 pfkB family carbohydrate kinase DUF268 PF03269.14 ORF58461 - 0.037 13.9 1.5 0.45 10.4 0.1 2.5 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF268 DUF4349 PF14257.6 ORF58461 - 0.067 12.6 2.1 0.12 11.7 2.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) APG6_N PF17675.1 ORF58461 - 0.87 10.1 17.3 2.5 8.6 17.3 1.8 1 0 0 1 1 1 0 Apg6 coiled-coil region ERM PF00769.19 ORF58461 - 2.2 8.0 29.5 13 5.5 29.5 2.1 1 1 0 1 1 1 0 Ezrin/radixin/moesin family Peptidase_U32 PF01136.19 ORF57979 - 1.2e-12 47.5 0.0 1.8e-12 46.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family U32 Thrombin_light PF09396.10 ORF53061 - 0.12 12.1 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Thrombin light chain MMR_HSR1_Xtn PF16897.5 ORF50744 - 1.7e-40 137.3 1.3 2.8e-40 136.6 1.3 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 ORF50744 - 9.8e-19 67.5 0.0 2.4e-18 66.2 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 ORF50744 - 7e-13 48.4 0.0 1.2e-12 47.6 0.0 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 ORF50744 - 5.6e-10 38.9 0.1 9.4e-10 38.2 0.1 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B BLUF PF04940.12 ORF50744 - 0.058 13.5 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 Sensors of blue-light using FAD Dynamin_N PF00350.23 ORF50744 - 0.081 13.0 0.0 4.5 7.3 0.0 2.6 2 0 0 2 2 2 0 Dynamin family GpcrRhopsn4 PF10192.9 ORF43019 - 1.4e-06 28.0 20.1 1.4e-06 28.0 20.1 1.9 2 1 0 2 2 2 1 Rhodopsin-like GPCR transmembrane domain Lung_7-TM_R PF06814.13 ORF43019 - 0.00014 21.2 19.9 0.0003 20.2 19.9 1.6 1 1 0 1 1 1 1 Lung seven transmembrane receptor Ammonium_transp PF00909.21 ORF33187 - 2.3e-28 99.0 11.4 2.8e-28 98.7 11.4 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF2935 PF11155.8 ORF31711 - 0.046 14.0 2.8 3.1 8.2 0.6 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF2935) ISG65-75 PF11727.8 ORF31711 - 0.34 10.1 4.6 0.89 8.7 0.6 2.1 1 1 1 2 2 2 0 Invariant surface glycoprotein SpoU_methylase PF00588.19 ORF29470 - 1.6e-23 83.5 0.0 2.4e-23 82.9 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family APG6_N PF17675.1 ORF28153 - 0.00033 21.2 4.8 0.00033 21.2 4.8 4.5 1 1 2 3 3 3 1 Apg6 coiled-coil region ATG16 PF08614.11 ORF28153 - 1.9 8.7 56.6 0.31 11.2 17.6 4.0 2 2 2 4 4 4 0 Autophagy protein 16 (ATG16) DUF1664 PF07889.12 ORF28153 - 2.7 8.1 12.7 2.9 8.0 0.2 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 ORF28153 - 9.5 5.0 35.4 0.27 10.1 12.4 3.1 2 1 0 2 2 2 0 Spc7 kinetochore protein LAGLIDADG_3 PF14528.6 ORF22606 - 1.4e-09 38.1 0.1 0.0032 17.7 0.0 3.1 3 0 0 3 3 3 2 LAGLIDADG-like domain LAGLIDADG_1 PF00961.19 ORF22606 - 2e-07 31.9 0.0 0.0081 17.1 0.0 2.8 2 1 0 2 2 2 2 LAGLIDADG endonuclease VWA PF00092.28 ORF21373 - 0.00018 21.8 0.0 0.00027 21.2 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain Med25_VWA PF11265.8 ORF21373 - 0.00019 21.3 0.0 0.00039 20.3 0.0 1.5 1 0 0 1 1 1 1 Mediator complex subunit 25 von Willebrand factor type A VWA_2 PF13519.6 ORF21373 - 0.001 19.7 0.0 0.0022 18.6 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain CS PF04969.16 ORF19364 - 0.00011 23.1 0.4 0.00034 21.6 0.4 1.9 1 1 0 1 1 1 1 CS domain DUF777 PF05606.11 ORF19364 - 0.044 13.5 1.9 2.4 7.9 0.1 2.4 1 1 1 2 2 2 0 Borrelia burgdorferi protein of unknown function (DUF777) IBR PF01485.21 ORF152737 - 1.3e-05 25.3 13.1 1.3e-05 25.3 13.1 4.4 2 1 2 4 4 4 2 IBR domain, a half RING-finger domain DUF2070 PF09843.9 ORF152737 - 4.4 5.5 9.9 5.7 5.1 9.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Baculo_PEP_C PF04513.12 ORF137592 - 0.00012 22.2 9.8 0.17 11.9 0.0 3.3 2 1 0 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus Apolipoprotein PF01442.18 ORF137592 - 0.0024 17.8 9.9 0.11 12.4 6.1 2.8 2 1 0 2 2 2 1 Apolipoprotein A1/A4/E domain MerR-DNA-bind PF09278.11 ORF137592 - 0.0033 17.9 2.2 0.14 12.7 0.0 3.2 3 0 0 3 3 3 1 MerR, DNA binding WXG100 PF06013.12 ORF137592 - 0.01 16.1 9.9 0.06 13.6 2.2 3.8 2 1 1 3 3 3 1 Proteins of 100 residues with WXG DUF4407 PF14362.6 ORF137592 - 0.09 12.1 22.1 0.0088 15.4 13.7 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Filament PF00038.21 ORF137592 - 0.094 12.3 31.0 1.1 8.7 19.6 3.0 1 1 1 2 2 2 0 Intermediate filament protein Plasmid_RAQPRD PF09686.10 ORF137592 - 0.11 12.7 1.5 0.46 10.7 0.8 2.4 1 1 1 2 2 2 0 Plasmid protein of unknown function (Plasmid_RAQPRD) DUF885 PF05960.11 ORF137592 - 0.16 11.6 5.1 0.21 11.2 3.3 1.5 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF885) Laminin_II PF06009.12 ORF137592 - 0.2 11.7 18.4 0.13 12.2 6.5 3.5 2 1 2 4 4 4 0 Laminin Domain II Ribosomal_L28e PF01778.17 ORF137592 - 0.29 11.9 0.1 0.29 11.9 0.1 2.7 2 1 0 2 2 2 0 Ribosomal L28e protein family BLOC1_2 PF10046.9 ORF137592 - 0.3 11.4 29.5 0.35 11.2 1.3 4.6 2 2 2 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4349 PF14257.6 ORF137592 - 0.34 10.3 7.2 1.9 7.9 1.9 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) YtxH PF12732.7 ORF137592 - 0.59 10.7 16.0 9.8 6.8 0.5 4.3 2 1 0 2 2 2 0 YtxH-like protein DUF2203 PF09969.9 ORF137592 - 0.95 10.2 16.0 6 7.6 2.6 3.8 2 1 3 5 5 5 0 Uncharacterized conserved protein (DUF2203) Seryl_tRNA_N PF02403.22 ORF137592 - 1.3 9.3 28.3 0.82 9.9 7.6 3.8 2 1 2 4 4 4 0 Seryl-tRNA synthetase N-terminal domain AKNA PF12443.8 ORF137592 - 2.9 8.6 16.8 7.5 7.3 3.6 3.7 2 1 1 3 3 3 0 AT-hook-containing transcription factor DUF1664 PF07889.12 ORF137592 - 2.9 8.0 22.5 1.5 8.9 7.3 4.0 1 1 2 4 4 4 0 Protein of unknown function (DUF1664) ZYG-11_interact PF05884.12 ORF137592 - 2.9 7.2 9.5 3.3 7.0 0.4 2.6 1 1 1 2 2 2 0 Interactor of ZYG-11 MtrG PF04210.13 ORF137592 - 3 7.8 9.0 20 5.1 0.0 4.6 4 1 0 4 4 4 0 Tetrahydromethanopterin S-methyltransferase, subunit G Flagellin_N PF00669.20 ORF137592 - 4.4 7.4 13.2 2.9 8.0 7.8 2.8 2 1 1 3 3 3 0 Bacterial flagellin N-terminal helical region YkyA PF10368.9 ORF137592 - 4.6 6.9 38.0 0.14 11.8 15.7 3.4 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein DUF489 PF04356.12 ORF137592 - 4.9 7.1 7.4 2.1 8.3 2.8 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF489) TPR_MLP1_2 PF07926.12 ORF137592 - 6 6.9 24.6 0.22 11.6 8.2 4.2 2 1 2 4 4 4 0 TPR/MLP1/MLP2-like protein Exonuc_VII_L PF02601.15 ORF137592 - 6.3 6.3 21.0 3.7e+02 0.4 21.1 2.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit DotA PF11388.8 ORF137592 - 6.7 7.0 7.8 2.5 8.3 1.3 3.0 2 2 2 4 4 4 0 Phagosome trafficking protein DotA Tropomyosin_1 PF12718.7 ORF137592 - 6.9 6.8 28.3 0.13 12.4 15.1 3.2 2 1 0 3 3 3 0 Tropomyosin like DAGK_cat PF00781.24 ORF135544 - 0.072 12.7 0.1 0.13 11.9 0.1 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain Melibiase_2 PF16499.5 ORF1313 - 1.1e-16 60.8 1.2 2e-16 60.0 1.2 1.3 1 1 0 1 1 1 1 Alpha galactosidase A Melibiase_C PF17801.1 ORF1313 - 2e-08 34.2 0.0 6.1e-08 32.6 0.0 1.8 2 0 0 2 2 2 1 Alpha galactosidase C-terminal beta sandwich domain He_PIG PF05345.12 ORF128940 - 5.9e-06 26.4 11.5 0.00013 22.0 7.2 3.0 2 0 0 2 2 2 2 Putative Ig domain DUF4834 PF16118.5 ORF128940 - 0.05 14.6 0.1 0.16 12.9 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) PMP1_2 PF08114.11 ORF128940 - 0.079 12.7 2.4 0.14 11.9 2.4 1.4 1 0 0 1 1 1 0 ATPase proteolipid family DUF2681 PF10883.8 ORF128940 - 0.086 13.3 0.1 0.17 12.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) Chordopox_A13L PF05961.11 ORF128940 - 0.14 12.4 2.1 0.55 10.5 2.1 2.0 1 1 0 1 1 1 0 Chordopoxvirus A13L protein TMEM154 PF15102.6 ORF128940 - 4.6 7.1 14.1 0.049 13.5 5.3 2.2 2 1 0 2 2 2 0 TMEM154 protein family CLIP PF12032.8 ORF128166 - 0.12 12.7 1.6 5.6 7.3 0.2 3.6 4 0 0 4 4 4 0 Regulatory CLIP domain of proteinases DUF4404 PF14357.6 ORF128083 - 0.035 14.7 0.0 0.07 13.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) KH_5 PF13184.6 ORF124501 - 2.2e-29 101.3 2.9 1.1e-27 95.9 0.2 2.8 3 0 0 3 3 3 1 NusA-like KH domain HHH_5 PF14520.6 ORF124501 - 1e-14 54.9 4.2 1.2e-09 38.6 0.4 3.2 3 1 1 4 4 4 2 Helix-hairpin-helix domain S1 PF00575.23 ORF124501 - 4.2e-05 23.8 0.1 0.00011 22.4 0.1 1.8 1 0 0 1 1 1 1 S1 RNA binding domain KH_2 PF07650.17 ORF124501 - 0.0014 18.4 0.2 0.018 14.8 0.0 2.5 2 0 0 2 2 2 1 KH domain DUF4332 PF14229.6 ORF124501 - 0.0019 18.4 0.1 1.4 9.2 0.1 2.6 1 1 0 2 2 2 2 Domain of unknown function (DUF4332) DNA_pol_lambd_f PF10391.9 ORF124501 - 0.015 15.1 0.0 2.1 8.2 0.0 3.2 3 0 0 3 3 3 0 Fingers domain of DNA polymerase lambda KH_4 PF13083.6 ORF124501 - 0.045 13.6 0.1 0.2 11.6 0.0 2.1 2 0 0 2 2 2 0 KH domain VWA PF00092.28 ORF116853 - 0.00018 21.8 0.0 0.00027 21.2 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain Med25_VWA PF11265.8 ORF116853 - 0.00019 21.3 0.0 0.00039 20.3 0.0 1.5 1 0 0 1 1 1 1 Mediator complex subunit 25 von Willebrand factor type A VWA_2 PF13519.6 ORF116853 - 0.001 19.7 0.0 0.0022 18.6 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain MtN3_slv PF03083.16 ORF114886 - 9.2e-15 54.5 12.1 3.6e-08 33.3 1.3 2.4 2 0 0 2 2 2 2 Sugar efflux transporter for intercellular exchange Oleosin PF01277.17 ORF107675 - 6.2 6.6 16.6 0.49 10.2 0.4 2.6 2 1 0 2 2 2 0 Oleosin Tubulin_C PF03953.17 ORF106379 - 7.9e-09 35.7 0.0 1.5e-08 34.8 0.0 1.5 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF106379 - 0.00034 20.9 0.0 0.00051 20.3 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Pkinase_Tyr PF07714.17 ORF10491 - 3.3e-45 154.4 0.0 4.9e-45 153.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF10491 - 3.1e-41 141.5 0.0 4.4e-41 141.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 ORF10491 - 0.029 13.7 0.0 0.051 12.9 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF10491 - 0.12 11.7 0.0 0.22 10.8 0.0 1.4 1 1 0 1 1 1 0 Kinase-like DUF1980 PF09323.10 ORF104681 - 0.023 14.6 3.1 0.033 14.1 1.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) DUF1772 PF08592.11 ORF104681 - 6.3 7.1 17.0 2.6 8.4 0.4 3.4 3 1 0 3 3 3 0 Domain of unknown function (DUF1772) Filament PF00038.21 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.0033 17.0 55.6 0.81 9.2 30.4 3.8 1 1 2 3 3 3 2 Intermediate filament protein ATG16 PF08614.11 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.007 16.6 14.6 0.007 16.6 14.6 4.2 1 1 2 4 4 4 1 Autophagy protein 16 (ATG16) ERM PF00769.19 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.01 15.7 57.1 0.25 11.1 14.5 3.2 2 1 1 3 3 3 0 Ezrin/radixin/moesin family bZIP_1 PF00170.21 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.013 15.6 1.7 0.013 15.6 1.7 6.8 2 2 5 7 7 6 0 bZIP transcription factor ADIP PF11559.8 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.013 15.5 13.0 0.013 15.5 13.0 4.5 1 1 3 4 4 4 0 Afadin- and alpha -actinin-Binding ZirS_C PF16583.5 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.06 12.9 0.1 0.22 11.1 0.0 1.9 2 0 0 2 2 2 0 Zinc-regulated secreted antivirulence protein C-terminal domain DUF3584 PF12128.8 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 0.35 8.3 52.7 0.49 7.8 52.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Golgin_A5 PF09787.9 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 1 8.8 64.0 0.079 12.4 22.0 3.4 1 1 0 3 3 3 0 Golgin subfamily A member 5 HtaA PF04213.13 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 1.1 9.7 4.7 0.81 10.2 0.3 2.4 2 1 0 2 2 2 0 Htaa UPF0242 PF06785.11 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 3.6 7.6 72.0 0.02 15.0 22.9 4.1 1 1 3 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 NODE_15922_length_1113_cov_43.619666_g12062_i0reverse_frame_2 - 6.9 5.9 46.6 3.2 7.0 21.3 2.9 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) DDE_Tnp_1 PF01609.21 ORF98830 - 7.2e-30 104.2 0.0 1.2e-29 103.5 0.0 1.4 1 0 0 1 1 1 1 Transposase DDE domain zf-TRM13_CCCH PF11722.8 ORF97211 - 0.38 10.6 5.6 4.5 7.1 0.4 3.3 3 0 0 3 3 3 0 CCCH zinc finger in TRM13 protein MFS_1 PF07690.16 ORF95538 - 2.2e-09 36.7 21.2 2.2e-09 36.7 21.2 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF1980 PF09323.10 ORF95538 - 0.3 11.0 5.1 0.044 13.7 1.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1980) tRNA-synt_1b PF00579.25 ORF9437 - 0.13 11.6 0.0 0.29 10.4 0.0 1.6 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) DUF3136 PF11334.8 ORF91696 - 0.084 12.7 0.1 0.75 9.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3136) COX3 PF00510.18 ORF89262 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III DUF5359 PF17313.2 ORF85475 - 3 7.9 5.5 40 4.3 2.3 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5359) FOP_dimer PF09398.10 ORF85349 - 2.7e-13 50.0 0.0 6.7e-13 48.7 0.0 1.6 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF85349 - 7.8e-07 28.0 0.1 1.6e-06 27.0 0.1 1.5 1 0 0 1 1 1 1 LisH G-patch_2 PF12656.7 ORF76882 - 5.1e-10 39.3 0.0 5.1e-10 39.3 0.0 3.0 2 1 0 2 2 1 1 G-patch domain KOW PF00467.29 ORF76882 - 3.6e-06 26.7 1.5 0.00062 19.6 0.2 2.7 2 0 0 2 2 2 1 KOW motif Tim54 PF11711.8 ORF76882 - 0.037 12.8 12.3 0.058 12.2 12.4 1.4 1 1 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 AF-4 PF05110.13 ORF76882 - 0.072 11.2 22.0 0.081 11.0 22.0 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF3912 PF13051.6 ORF76882 - 0.14 12.4 1.0 11 6.4 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3912) Presenilin PF01080.17 ORF76882 - 0.28 9.9 12.1 0.39 9.4 12.1 1.2 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 ORF76882 - 0.29 10.3 12.5 0.42 9.8 12.5 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter V_ATPase_I PF01496.19 ORF76882 - 0.48 8.3 6.8 0.68 7.8 6.8 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CDC45 PF02724.14 ORF76882 - 0.6 8.3 17.8 0.83 7.9 17.8 1.1 1 0 0 1 1 1 0 CDC45-like protein CLN3 PF02487.17 ORF76882 - 0.79 8.7 3.2 1 8.3 3.2 1.2 1 0 0 1 1 1 0 CLN3 protein NPR3 PF03666.13 ORF76882 - 0.9 8.3 18.2 1.3 7.7 18.2 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Connexin PF00029.19 ORF76882 - 1.1 9.0 8.8 1.8 8.3 8.8 1.4 1 0 0 1 1 1 0 Connexin Apt1 PF10351.9 ORF76882 - 1.1 8.1 20.1 1.1 8.1 16.5 2.1 2 0 0 2 2 2 0 Golgi-body localisation protein domain RP-C_C PF11800.8 ORF76882 - 1.4 8.9 8.1 2.5 8.2 8.1 1.4 1 0 0 1 1 1 0 Replication protein C C-terminal region RNA_pol_Rpc4 PF05132.14 ORF76882 - 1.5 9.3 12.1 3.5 8.1 12.1 1.7 1 0 0 1 1 1 0 RNA polymerase III RPC4 GREB1 PF15782.5 ORF76882 - 1.9 5.5 13.2 2.4 5.2 13.2 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Dsh_C PF12316.8 ORF76882 - 2.1 8.7 9.4 4.1 7.8 9.4 1.5 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal EOS1 PF12326.8 ORF76882 - 3.2 7.7 6.2 5.5 6.9 6.2 1.5 1 0 0 1 1 1 0 N-glycosylation protein SLC12 PF03522.15 ORF76882 - 3.4 6.6 17.9 5.4 5.9 17.9 1.2 1 0 0 1 1 1 0 Solute carrier family 12 Hid1 PF12722.7 ORF76882 - 3.6 5.6 12.5 4.6 5.2 12.5 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein ALMT PF11744.8 ORF76882 - 4 6.1 11.7 6.5 5.5 11.7 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter PKD_channel PF08016.12 ORF71568 - 2.2e-21 76.1 27.6 2.7e-21 75.7 27.6 1.0 1 0 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF71568 - 9.8e-05 21.7 37.7 0.00043 19.6 37.7 1.9 1 1 0 1 1 1 1 Ion transport protein COX3 PF00510.18 ORF68580 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III RecR PF02132.15 ORF66241 - 0.36 10.4 3.5 1.1 8.8 0.2 2.7 2 0 0 2 2 2 0 RecR protein Peptidase_C1 PF00112.23 ORF5978 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF5978 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF5978 - 9e-08 32.4 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) COX3 PF00510.18 ORF58746 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III C2-set_2 PF08205.12 ORF56129 - 0.025 14.6 0.0 0.049 13.7 0.0 1.4 1 0 0 1 1 1 0 CD80-like C2-set immunoglobulin domain Peptidase_C1 PF00112.23 ORF54677 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF54677 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF54677 - 9e-08 32.4 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) p450 PF00067.22 ORF53664 - 2.2e-48 165.2 0.1 2.7e-48 164.9 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 Glyco_transf_15 PF01793.16 ORF53153 - 7.8e-40 137.1 0.3 9.7e-40 136.8 0.3 1.0 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase EGF_2 PF07974.13 ORF53153 - 0.0068 16.8 0.7 0.0068 16.8 0.7 1.9 2 0 0 2 2 2 1 EGF-like domain TCR PF03638.15 ORF53153 - 1.2 9.5 6.7 0.45 10.9 0.9 2.2 2 0 0 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain GlcNAc PF11397.8 ORF49686 - 9.3e-56 189.8 0.0 1.5e-55 189.1 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase (GlcNAc) MFS_1 PF07690.16 ORF43893 - 2.7e-06 26.6 7.2 3.3e-06 26.3 7.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Peptidase_S10 PF00450.22 ORF41402 - 0.063 12.7 0.1 0.098 12.0 0.1 1.3 1 1 0 1 1 1 0 Serine carboxypeptidase Arm_vescicular PF18770.1 ORF41402 - 4.7 7.2 10.0 14 5.7 0.3 3.6 2 1 1 3 3 3 0 Armadillo tether-repeat of vescicular transport factor NIF PF03031.18 ORF39662 - 2e-44 151.1 4.6 2e-44 151.1 4.6 1.9 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase Peptidase_C1 PF00112.23 ORF36872 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF36872 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF36872 - 9e-08 32.4 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) GAS2 PF02187.17 ORF34920 - 1.8e-08 34.3 0.1 4.5e-08 33.1 0.1 1.7 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain COX3 PF00510.18 ORF34485 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III NUC153 PF08159.12 ORF32296 - 0.073 12.9 1.5 0.15 11.9 0.3 2.2 2 0 0 2 2 2 0 NUC153 domain DUF4266 PF14086.6 ORF32296 - 0.19 12.7 0.1 1.1 10.2 0.1 2.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4266) Mem_trans PF03547.18 ORF32296 - 6.6 5.0 5.2 8.9 4.6 5.2 1.4 1 0 0 1 1 1 0 Membrane transport protein MoCF_biosynth PF00994.24 ORF30144 - 0.16 11.7 0.1 5.1 6.8 0.0 2.3 2 0 0 2 2 2 0 Probable molybdopterin binding domain Sec8_exocyst PF04048.14 ORF30144 - 0.27 11.1 9.6 0.19 11.6 6.6 2.3 2 1 0 2 2 2 0 Sec8 exocyst complex component specific domain CREPT PF16566.5 ORF30144 - 0.84 9.8 10.9 10 6.3 5.4 2.5 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour SOGA PF11365.8 ORF30144 - 2.5 9.3 17.9 7.2 7.8 1.5 4.1 3 1 1 4 4 4 0 Protein SOGA GAS PF13851.6 ORF30144 - 4 6.7 25.4 1.3 8.3 17.6 2.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Fez1 PF06818.15 ORF30144 - 6.3 7.2 20.2 16 5.9 18.1 2.4 1 1 1 2 2 2 0 Fez1 DUF223 PF02721.14 ORF30144 - 7.4 6.9 7.7 1.2 9.5 2.2 2.5 2 1 1 3 3 3 0 Domain of unknown function DUF223 COX3 PF00510.18 ORF27351 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III His_Phos_2 PF00328.22 ORF26187 - 1.5e-12 47.6 0.1 4e-09 36.3 0.0 2.3 2 1 0 2 2 2 2 Histidine phosphatase superfamily (branch 2) His_Phos_1 PF00300.22 ORF26187 - 0.0069 16.1 0.4 0.034 13.8 0.0 2.2 3 0 0 3 3 3 1 Histidine phosphatase superfamily (branch 1) tRNA-synt_1b PF00579.25 ORF21647 - 0.13 11.6 0.0 0.29 10.4 0.0 1.6 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) GCV_T PF01571.21 ORF19289 - 5e-24 85.1 0.0 6.8e-24 84.6 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 ORF19289 - 3.5e-20 71.7 0.0 5.9e-20 71.0 0.0 1.4 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain SoxG PF04268.12 ORF19289 - 0.023 14.8 0.0 0.078 13.1 0.0 1.9 2 0 0 2 2 2 0 Sarcosine oxidase, gamma subunit family COX3 PF00510.18 ORF17317 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III FOP_dimer PF09398.10 ORF150700 - 2.7e-13 50.0 0.0 6.7e-13 48.7 0.0 1.6 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF150700 - 7.8e-07 28.0 0.1 1.6e-06 27.0 0.1 1.5 1 0 0 1 1 1 1 LisH COX3 PF00510.18 ORF148999 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III Acyltransferase PF01553.21 ORF145363 - 3.2e-14 52.7 0.0 6.7e-14 51.7 0.0 1.5 1 0 0 1 1 1 1 Acyltransferase COX3 PF00510.18 ORF142490 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III EamA PF00892.20 ORF133202 - 4.7e-15 56.0 30.5 2.8e-08 34.0 5.8 2.8 2 1 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 ORF133202 - 0.00023 20.5 5.9 0.00023 20.5 5.9 3.1 1 1 2 3 3 3 2 Purine nucleobase transmembrane transport TPT PF03151.16 ORF133202 - 0.0043 16.4 1.0 0.0043 16.4 1.0 2.9 2 1 0 2 2 2 1 Triose-phosphate Transporter family DUF5336 PF17270.2 ORF133202 - 0.13 11.9 0.6 0.99 9.0 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5336) UPF0139 PF03669.13 ORF133202 - 0.2 11.5 3.7 12 5.8 0.1 3.5 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0139) Lig_chan PF00060.26 ORF133202 - 0.69 9.7 6.8 5.3 6.9 1.7 2.3 2 0 0 2 2 2 0 Ligand-gated ion channel ERAP1_C PF11838.8 ORF12939 - 2.9e-24 86.2 0.0 3.4e-24 86.0 0.0 1.0 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Borrelia_orfD PF02999.14 ORF12939 - 0.08 13.3 0.8 0.38 11.1 0.1 2.5 2 0 0 2 2 2 0 Borrelia orf-D family ILEI PF15711.5 ORF12939 - 0.12 12.9 0.5 1.6 9.3 0.1 2.6 2 0 0 2 2 2 0 Interleukin-like EMT inducer COX3 PF00510.18 ORF124944 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF124187 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF123362 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III DUF5359 PF17313.2 ORF123315 - 3 7.9 5.5 40 4.3 2.3 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5359) COX3 PF00510.18 ORF122398 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF121849 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III SRP_TPR_like PF17004.5 ORF120844 - 0.26 11.3 2.6 6.2 6.9 2.6 2.4 1 1 0 1 1 1 0 Putative TPR-like repeat Brix PF04427.18 ORF116546 - 5.8e-25 88.5 1.9 1.2e-24 87.5 1.9 1.5 1 0 0 1 1 1 1 Brix domain STAT2_C PF12188.8 ORF116546 - 0.19 11.7 1.2 10 6.1 0.1 3.5 3 0 0 3 3 3 0 Signal transducer and activator of transcription 2 C terminal VASt PF16016.5 ORF114272 - 8.7e-13 48.9 0.0 1.5e-12 48.1 0.0 1.3 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain Peptidase_C1 PF00112.23 ORF110997 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF110997 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF110997 - 9e-08 32.5 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) COX3 PF00510.18 ORF107824 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III Peptidase_C1 PF00112.23 ORF106825 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF106825 - 2e-08 33.4 4.1 9.6e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF106825 - 9e-08 32.4 0.5 2.3e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) FTSW_RODA_SPOVE PF01098.19 ORF106217 - 1.4e-125 419.0 28.9 1.8e-125 418.7 28.9 1.0 1 0 0 1 1 1 1 Cell cycle protein EamA PF00892.20 ORF104939 - 1.3e-19 70.7 38.5 8.6e-10 38.9 19.1 2.1 2 0 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 ORF104939 - 0.033 13.4 28.1 0.13 11.4 28.2 1.9 1 1 0 1 1 1 0 UAA transporter family TCR_zetazeta PF11628.8 ORF104939 - 0.13 12.0 2.5 0.17 11.6 0.1 2.5 2 0 0 2 2 2 0 T-cell surface glycoprotein CD3 zeta chain COX3 PF00510.18 ORF103630 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF103322 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF101311 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III COX3 PF00510.18 ORF101144 - 2.2e-16 60.5 32.7 2.2e-16 60.5 32.7 1.9 2 0 0 2 2 2 1 Cytochrome c oxidase subunit III SNARE_assoc PF09335.11 ORF100057 - 4.5e-22 78.8 12.3 1.9e-21 76.8 8.8 2.6 3 0 0 3 3 2 1 SNARE associated Golgi protein PBP1_TM PF14812.6 ORF100057 - 0.0028 18.0 9.2 0.01 16.2 0.0 2.4 2 0 0 2 2 2 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Connexin PF00029.19 ORF100057 - 0.0045 16.8 1.5 0.01 15.6 1.1 1.7 2 0 0 2 2 2 1 Connexin SARAF PF06682.12 ORF100057 - 0.0081 15.9 0.5 5.9 6.5 0.1 3.0 3 0 0 3 3 3 1 SOCE-associated regulatory factor of calcium homoeostasis Orthopox_A36R PF05950.11 ORF100057 - 0.013 15.6 0.9 0.12 12.5 0.0 2.3 2 0 0 2 2 2 0 Orthopoxvirus A36R protein G0-G1_switch_2 PF15103.6 ORF100057 - 0.02 15.3 1.1 0.074 13.5 1.1 2.0 1 0 0 1 1 1 0 G0/G1 switch protein 2 DUF4834 PF16118.5 ORF100057 - 0.056 14.4 0.4 0.056 14.4 0.4 3.8 3 1 1 4 4 4 0 Domain of unknown function (DUF4834) V_ATPase_I PF01496.19 ORF100057 - 0.078 10.9 1.2 0.15 9.9 1.2 1.4 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF2663 PF10864.8 ORF100057 - 0.082 13.3 0.7 0.55 10.6 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2663) DUF1772 PF08592.11 ORF100057 - 0.43 10.9 2.5 6.4 7.1 0.0 2.6 3 0 0 3 3 2 0 Domain of unknown function (DUF1772) DUF4407 PF14362.6 ORF100057 - 0.48 9.7 11.7 0.088 12.1 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) EIIBC-GUT_N PF03612.14 ORF100057 - 0.66 9.7 6.1 1.4 8.7 6.1 1.5 1 0 0 1 1 1 0 Sorbitol phosphotransferase enzyme II N-terminus Pex14_N PF04695.13 ORF100057 - 0.93 10.1 6.9 37 4.9 9.2 2.2 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region SID-1_RNA_chan PF13965.6 ORF100057 - 0.96 7.8 7.4 0.17 10.2 0.9 2.1 1 1 1 2 2 2 0 dsRNA-gated channel SID-1 Saf_2TM PF18303.1 ORF100057 - 1.2 8.7 0.0 1.2 8.7 0.0 3.0 3 1 0 3 3 3 0 SAVED-fused 2TM effector domain DUF4542 PF15075.6 ORF100057 - 2.6 8.4 4.4 1.7 9.1 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4542) Serinc PF03348.15 ORF100057 - 5.1 5.9 9.8 0.057 12.3 0.6 2.1 3 0 0 3 3 3 0 Serine incorporator (Serinc) FAM176 PF14851.6 ORF100057 - 6 6.5 9.4 0.083 12.6 1.1 2.0 2 0 0 2 2 2 0 FAM176 family Promethin PF16015.5 ORF100057 - 7.7 6.5 11.2 0.31 11.0 2.7 2.7 2 1 1 3 3 3 0 Promethin RNA_pol_Rpc4 PF05132.14 ORF100057 - 9.1 6.7 8.9 0.3 11.5 1.3 2.0 2 0 0 2 2 2 0 RNA polymerase III RPC4 MucB_RseB PF03888.14 ORF942 - 2.2e-61 206.5 0.0 2.8e-61 206.2 0.0 1.1 1 0 0 1 1 1 1 MucB/RseB N-terminal domain MucB_RseB_C PF17188.4 ORF942 - 3.2e-29 101.0 0.0 5.3e-29 100.3 0.0 1.4 1 0 0 1 1 1 1 MucB/RseB C-terminal domain LolA_like PF17131.4 ORF942 - 0.0002 21.2 0.0 0.00032 20.5 0.0 1.2 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein EMP70 PF02990.16 ORF92645 - 8.5 4.9 9.6 13 4.3 9.6 1.2 1 0 0 1 1 1 0 Endomembrane protein 70 DUF4818 PF16089.5 ORF86228 - 0.076 13.5 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) FAD_binding_7 PF03441.14 ORF82980 - 3.6e-39 134.3 0.3 6.5e-39 133.5 0.3 1.4 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase Carb_bind PF10645.9 ORF76802 - 0.075 13.3 1.4 0.24 11.6 1.4 1.9 1 0 0 1 1 1 0 Carbohydrate binding Exonuc_VII_L PF02601.15 ORF74385 - 0.7 9.4 12.5 1.1 8.8 12.5 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DASH_Spc19 PF08287.11 ORF74385 - 0.94 9.4 19.5 1.9 8.4 19.1 1.7 1 1 0 1 1 1 0 Spc19 Mitofilin PF09731.9 ORF74385 - 1.1 8.0 16.9 1.9 7.2 16.9 1.3 1 0 0 1 1 1 0 Mitochondrial inner membrane protein DUF1664 PF07889.12 ORF74385 - 1.5 8.9 12.6 0.63 10.1 0.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF4449 PF14613.6 ORF74385 - 1.8 8.6 14.9 6 7.0 14.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4449) CBP_BcsN PF17038.5 ORF74385 - 2 7.8 6.2 1.5 8.1 0.1 2.2 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsN DUF4407 PF14362.6 ORF74385 - 5 6.4 12.1 7 5.9 12.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3450 PF11932.8 ORF74385 - 7.1 5.9 19.4 0.19 11.0 4.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) TPR_8 PF13181.6 ORF7272 - 0.0031 17.6 0.9 0.83 10.0 0.2 3.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF7272 - 0.0031 17.5 0.3 0.032 14.3 0.3 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF7272 - 0.015 15.1 0.9 0.12 12.2 0.7 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat STE PF02200.16 ORF7272 - 0.045 14.2 1.4 0.11 13.0 0.2 2.1 2 0 0 2 2 2 0 STE like transcription factor TPR_12 PF13424.6 ORF7272 - 0.076 13.3 0.3 0.77 10.1 0.0 2.5 3 0 0 3 3 3 0 Tetratricopeptide repeat Arteri_nucleo PF01481.16 ORF72622 - 0.033 14.5 0.0 0.068 13.5 0.0 1.5 1 0 0 1 1 1 0 Arterivirus nucleocapsid protein DUF4955 PF16315.5 ORF72622 - 0.13 12.4 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4955) ubiquitin PF00240.23 ORF56436 - 0.00066 19.4 0.6 0.0011 18.6 0.6 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF56436 - 0.031 14.1 0.2 0.088 12.6 0.2 1.8 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like PI3K_rbd PF00794.18 ORF56436 - 0.1 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain CSTF2_hinge PF14327.6 ORF56436 - 0.36 11.3 3.4 9 6.8 0.7 3.4 4 0 0 4 4 4 0 Hinge domain of cleavage stimulation factor subunit 2 DUF3887 PF13026.6 ORF56436 - 1.4 9.8 4.9 0.36 11.7 0.6 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF3887) zf-C3HC4_3 PF13920.6 ORF47896 - 5.2e-13 48.6 9.5 5.2e-13 48.6 9.5 2.8 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF47896 - 7.1e-08 32.2 9.5 7.1e-08 32.2 9.5 2.7 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF47896 - 2.4e-05 24.5 9.9 2.4e-05 24.5 9.9 3.0 3 0 0 3 3 3 1 Ring finger domain zf-RING_5 PF14634.6 ORF47896 - 0.0017 18.3 9.8 0.0017 18.3 9.8 3.0 2 1 1 3 3 3 1 zinc-RING finger domain CCDC53 PF10152.9 ORF47896 - 0.12 12.8 1.2 0.18 12.2 1.2 1.2 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex ApoM PF11032.8 ORF47896 - 0.13 11.9 0.0 0.24 11.1 0.0 1.3 1 0 0 1 1 1 0 ApoM domain zf-RING_UBOX PF13445.6 ORF47896 - 1.9 8.6 18.0 1.8 8.7 4.9 3.1 2 1 1 3 3 3 0 RING-type zinc-finger Ribonuc_red_sm PF00268.21 ORF44014 - 1.7e-57 195.0 0.5 2.1e-57 194.7 0.5 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain BROMI PF14961.6 ORF44014 - 0.14 9.6 0.0 0.18 9.2 0.0 1.1 1 0 0 1 1 1 0 Broad-minded protein p450 PF00067.22 ORF3563 - 7.4e-48 163.4 0.3 1.2e-47 162.7 0.3 1.2 1 0 0 1 1 1 1 Cytochrome P450 CD34_antigen PF06365.12 ORF31636 - 0.088 12.4 0.2 0.19 11.3 0.2 1.5 1 0 0 1 1 1 0 CD34/Podocalyxin family CbtA PF09490.10 ORF31636 - 0.22 11.3 1.4 0.49 10.1 0.1 2.1 1 1 1 3 3 3 0 Probable cobalt transporter subunit (CbtA) YajC PF02699.15 ORF31636 - 0.38 10.7 2.9 1.9 8.4 0.1 3.1 2 0 0 2 2 2 0 Preprotein translocase subunit DUF2852 PF11014.8 ORF31636 - 5.3 7.2 4.9 21 5.3 0.3 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2852) WD40 PF00400.32 ORF308 - 1.3e-14 54.3 8.9 0.00018 22.2 0.6 5.5 5 1 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF308 - 3.8e-05 23.9 0.0 0.0082 16.4 0.0 3.7 1 1 4 5 5 5 1 Anaphase-promoting complex subunit 4 WD40 domain Pentapeptide PF00805.22 ORF301 - 5.5e-37 125.0 42.2 2.7e-10 39.7 1.1 9.3 2 2 9 12 12 12 12 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF301 - 9.8e-34 115.4 13.9 2.3e-10 40.5 0.5 5.9 2 1 5 8 8 8 6 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF301 - 1.6e-17 63.4 13.1 0.0011 19.1 0.1 7.4 2 2 5 8 8 8 5 Pentapeptide repeats (9 copies) CfAFP PF05264.11 ORF301 - 6.2e-05 23.0 0.2 0.61 10.1 0.0 3.8 2 1 3 5 5 5 3 Choristoneura fumiferana antifreeze protein (CfAFP) KIF1B PF12423.8 ORF26900 - 3.9 8.0 5.9 2 8.9 0.2 3.0 3 0 0 3 3 3 0 Kinesin protein 1B HATPase_c PF02518.26 ORF26546 - 4e-27 94.9 0.0 8.9e-27 93.8 0.0 1.6 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF26546 - 1.4e-18 66.7 1.0 5.4e-18 64.8 0.3 2.2 1 1 1 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 ORF26546 - 4.1e-11 42.9 0.0 9.5e-11 41.7 0.0 1.7 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 ORF26546 - 2e-08 34.2 0.0 3.9e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PhoR PF11808.8 ORF26546 - 4.2e-06 27.1 0.3 8.1e-06 26.2 0.3 1.5 1 0 0 1 1 1 1 Phosphate regulon sensor protein PhoR HATPase_c_3 PF13589.6 ORF26546 - 4.8e-06 26.4 0.0 8.2e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 ORF26546 - 0.00019 21.4 0.0 0.00041 20.3 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.7 ORF26546 - 0.02 15.1 0.0 0.089 13.1 0.0 2.0 2 0 0 2 2 2 0 PAS domain NYD-SP28_assoc PF14775.6 ORF1706 - 0.043 13.9 1.5 0.094 12.8 1.5 1.5 1 0 0 1 1 1 0 Sperm tail C-terminal domain ESP PF16590.5 ORF148748 - 0.27 11.5 1.1 1.4 9.2 0.0 2.1 2 0 0 2 2 2 0 Exocrine gland-secreting peptide DUF5014 PF16406.5 ORF142079 - 0.021 15.1 0.1 32 4.9 0.0 3.6 3 0 0 3 3 3 0 Domain of unknown function (DUF5014) YukD PF08817.10 ORF142079 - 0.058 14.1 0.3 19 6.0 0.0 3.6 4 0 0 4 4 4 0 WXG100 protein secretion system (Wss), protein YukD MFS_1 PF07690.16 ORF138108 - 2.1e-26 92.7 38.1 1.7e-19 70.0 14.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF138108 - 1e-06 27.9 25.5 0.0061 15.5 2.1 3.1 1 1 2 3 3 3 3 Sugar (and other) transporter PUCC PF03209.15 ORF138108 - 4.9e-05 22.5 1.6 7.6e-05 21.9 1.6 1.3 1 0 0 1 1 1 1 PUCC protein MFS_3 PF05977.13 ORF138108 - 0.00048 18.7 2.0 0.0012 17.4 1.8 1.7 1 1 0 1 1 1 1 Transmembrane secretion effector Wzz PF02706.15 ORF138108 - 0.27 11.6 2.1 15 5.9 0.0 3.4 3 0 0 3 3 3 0 Chain length determinant protein Ldh_1_N PF00056.23 ORF134742 - 1.4e-33 115.9 0.0 2.1e-33 115.4 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF134742 - 1.2e-32 113.1 0.1 2.4e-32 112.2 0.0 1.5 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain PPR_2 PF13041.6 ORF132043 - 1.1e-48 163.2 0.0 3.3e-08 33.6 0.0 8.1 2 2 7 9 9 9 9 PPR repeat family PPR_3 PF13812.6 ORF132043 - 1.2e-34 118.2 0.0 3.6e-06 27.0 0.0 6.1 3 1 4 7 7 7 7 Pentatricopeptide repeat domain PPR PF01535.20 ORF132043 - 2.8e-33 111.8 2.1 0.0047 17.1 0.0 8.6 9 0 0 9 9 9 8 PPR repeat PPR_1 PF12854.7 ORF132043 - 1.6e-21 75.6 0.0 0.035 13.8 0.0 8.9 9 0 0 9 9 9 6 PPR repeat PPR_long PF17177.4 ORF132043 - 4.4e-14 52.3 0.0 5.7e-05 22.6 0.0 3.0 1 1 2 3 3 3 3 Pentacotripeptide-repeat region of PRORP TPR_7 PF13176.6 ORF132043 - 5.6e-05 22.9 1.4 3.3 8.0 0.0 5.1 6 0 0 6 6 6 2 Tetratricopeptide repeat ATP-grasp_4 PF13535.6 ORF132043 - 0.011 15.4 0.0 4.5 6.9 0.0 4.2 3 2 2 5 5 5 0 ATP-grasp domain DUF4311 PF14188.6 ORF132043 - 0.054 13.3 0.6 0.47 10.2 0.1 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4311) Flu_B_NS1 PF02942.14 ORF132043 - 0.059 12.4 0.0 20 4.2 0.0 3.3 2 1 2 4 4 4 0 Influenza B non-structural protein (NS1) DUF4596 PF15363.6 ORF132043 - 0.85 9.9 7.6 2 8.7 0.0 4.5 4 1 1 5 5 5 0 Domain of unknown function (DUF4596) FAM199X PF15814.5 ORF129386 - 1.3 8.0 7.0 1.9 7.5 7.0 1.2 1 0 0 1 1 1 0 Protein family FAM199X CD34_antigen PF06365.12 ORF128030 - 0.088 12.4 0.2 0.19 11.3 0.2 1.5 1 0 0 1 1 1 0 CD34/Podocalyxin family CbtA PF09490.10 ORF128030 - 0.22 11.3 1.4 0.49 10.1 0.1 2.1 1 1 1 3 3 3 0 Probable cobalt transporter subunit (CbtA) YajC PF02699.15 ORF128030 - 0.38 10.7 2.9 1.9 8.4 0.1 3.1 2 0 0 2 2 2 0 Preprotein translocase subunit DUF2852 PF11014.8 ORF128030 - 5.3 7.2 4.9 21 5.3 0.3 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2852) Pkinase_Tyr PF07714.17 ORF12342 - 4.5e-48 163.8 0.0 5.6e-48 163.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF12342 - 7.5e-46 156.6 0.0 9.9e-46 156.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF12342 - 0.013 14.8 0.0 0.02 14.2 0.0 1.2 1 0 0 1 1 1 0 Kinase-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks42.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks42.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks42.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks42.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:20:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- AreA_N PF07573.11 ORF17740 - 0.035 14.7 0.2 0.042 14.5 0.2 1.1 1 0 0 1 1 1 0 Nitrogen regulatory protein AreA N terminus WH2 PF02205.20 ORF1774 - 0.041 13.7 0.1 0.077 12.9 0.1 1.4 1 0 0 1 1 1 0 WH2 motif Nas2_N PF18265.1 ORF1774 - 0.052 13.5 0.1 0.072 13.0 0.1 1.3 1 0 0 1 1 1 0 Nas2 N_terminal domain ECSCR PF15820.5 ORF17716 - 0.016 15.0 0.1 0.016 15.0 0.1 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator NLE PF08154.12 ORF1771 - 0.064 13.8 0.1 0.08 13.5 0.1 1.1 1 0 0 1 1 1 0 NLE (NUC135) domain DUF3488 PF11992.8 ORF16915 - 1.5 7.7 8.1 1.8 7.5 8.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) VirB3 PF05101.13 ORF1548 - 0.0049 17.1 0.8 0.0059 16.8 0.8 1.1 1 0 0 1 1 1 1 Type IV secretory pathway, VirB3-like protein DUF3272 PF11676.8 ORF152932 - 0.057 13.7 2.0 0.057 13.7 1.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3272) Sex_peptide PF08138.11 ORF15287 - 0.071 13.3 0.1 0.071 13.3 0.1 1.5 2 0 0 2 2 2 0 Sex peptide (SP) family Mss4 PF04421.13 ORF152570 - 0.038 14.1 2.8 0.048 13.8 2.8 1.1 1 0 0 1 1 1 0 Mss4 protein RNA12 PF10443.9 ORF152134 - 0.085 11.6 0.2 0.09 11.5 0.2 1.0 1 0 0 1 1 1 0 RNA12 protein DUF4719 PF15843.5 ORF151104 - 0.12 12.4 1.5 0.13 12.4 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4719) DNA_pol_viral_N PF00242.17 ORF150042 - 0.038 13.5 0.1 0.039 13.5 0.1 1.0 1 0 0 1 1 1 0 DNA polymerase (viral) N-terminal domain TRF PF08558.10 ORF149985 - 0.033 13.8 2.1 0.037 13.6 2.1 1.0 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) UQ_con PF00179.26 ORF149402 - 6.3e-09 35.6 0.0 7e-09 35.5 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF1181 PF06680.11 ORF148770 - 1.8 8.4 4.5 1.9 8.4 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1181) BLM_N PF16202.5 ORF148664 - 0.02 14.0 0.1 0.021 14.0 0.1 1.0 1 0 0 1 1 1 0 N-terminal region of Bloom syndrome protein Nop10p PF04135.12 ORF148140 - 6.8e-20 70.8 0.7 8.1e-20 70.6 0.7 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family DUF4711 PF15829.5 ORF147334 - 0.022 14.7 0.0 0.022 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4711) Collar PF07484.12 ORF147140 - 0.12 12.4 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Phage Tail Collar Domain AAA_7 PF12775.7 ORF146788 - 0.00029 20.4 0.0 0.00031 20.3 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region Ras PF00071.22 ORF146788 - 0.00059 19.5 0.1 0.00075 19.1 0.1 1.2 1 0 0 1 1 1 1 Ras family AAA_5 PF07728.14 ORF146788 - 0.00076 19.5 0.0 0.00087 19.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 ORF146788 - 0.0011 18.9 0.0 0.0011 18.9 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase MCM PF00493.23 ORF146788 - 0.0011 18.1 0.0 0.0012 18.0 0.0 1.0 1 0 0 1 1 1 1 MCM P-loop domain Roc PF08477.13 ORF146788 - 0.0013 18.9 0.0 0.0016 18.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 ORF146788 - 0.063 13.8 0.0 0.063 13.8 0.0 1.0 1 0 0 1 1 1 0 ABC transporter ATPase_2 PF01637.18 ORF146788 - 0.092 12.6 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea TsaE PF02367.17 ORF146788 - 0.14 12.2 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF1724 PF08350.10 ORF146774 - 0.049 13.8 0.1 0.053 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1724) BLYB PF05289.11 ORF146485 - 0.013 15.7 0.3 0.014 15.6 0.3 1.0 1 0 0 1 1 1 0 Borrelia hemolysin accessory protein SYCP2_SLD PF18584.1 ORF146378 - 0.053 13.7 0.1 0.06 13.6 0.1 1.2 1 0 0 1 1 1 0 Synaptonemal complex 2 Spt16M-like domain EBA-175_VI PF11556.8 ORF14581 - 0.015 15.6 0.1 0.017 15.4 0.1 1.1 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 Plasmod_dom_1 PF09715.10 ORF145463 - 0.014 15.4 0.5 0.022 14.8 0.5 1.4 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) Deltaretro_Tax PF05599.11 ORF144958 - 0.37 11.3 8.5 14 6.3 8.5 2.0 1 1 0 1 1 1 0 Deltaretrovirus Tax protein V_ATPase_I PF01496.19 ORF144218 - 1.7 6.5 3.0 1.8 6.4 3.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Pkr1 PF08636.10 ORF143931 - 0.0073 16.4 0.3 0.01 15.9 0.3 1.3 1 1 0 1 1 1 1 ER protein Pkr1 MyTH4 PF00784.17 ORF143931 - 0.015 15.8 0.2 0.016 15.7 0.2 1.2 1 0 0 1 1 1 0 MyTH4 domain Deltaretro_Tax PF05599.11 ORF142641 - 0.37 11.3 8.5 14 6.3 8.5 2.0 1 1 0 1 1 1 0 Deltaretrovirus Tax protein zf-CXXC PF02008.20 ORF142590 - 0.0083 16.1 4.3 0.018 15.0 4.3 1.6 1 1 0 1 1 1 1 CXXC zinc finger domain Tad PF13400.6 ORF142327 - 0.46 10.8 0.0 0.46 10.8 0.0 1.5 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like DOPA_dioxygen PF08883.11 ORF142198 - 0.16 12.1 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Dopa 4,5-dioxygenase family Acetyltransf_16 PF05301.11 ORF141692 - 2.7e-05 24.0 0.9 2.8e-05 23.9 0.9 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase, Mec-17 AAA_31 PF13614.6 ORF141692 - 0.058 13.3 0.1 0.06 13.3 0.1 1.0 1 0 0 1 1 1 0 AAA domain zf-H2C2_5 PF13909.6 ORF141605 - 0.0082 15.9 0.6 0.0082 15.9 0.6 1.7 2 0 0 2 2 2 1 C2H2-type zinc-finger domain Plasmod_dom_1 PF09715.10 ORF141162 - 0.014 15.4 0.5 0.022 14.8 0.5 1.4 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) DUF3073 PF11273.8 ORF141070 - 0.16 12.7 0.1 0.27 12.0 0.1 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3073) RTBV_P12 PF06361.11 ORF140808 - 0.08 13.4 0.2 0.08 13.4 0.2 1.1 1 0 0 1 1 1 0 Rice tungro bacilliform virus P12 protein DUF2963 PF11178.8 ORF140808 - 0.78 9.5 7.8 10 5.9 7.6 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2963) DUF3810 PF12725.7 ORF140806 - 4.2 6.6 6.1 4.2 6.6 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Vps16_C PF04840.12 ORF140403 - 0.031 13.3 0.0 0.031 13.3 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region RAG1_imp_bd PF12560.8 ORF14027 - 0.13 11.8 0.4 0.14 11.6 0.4 1.1 1 0 0 1 1 1 0 RAG1 importin binding GWT1 PF06423.12 ORF139918 - 1.7 8.8 10.0 1.8 8.7 10.0 1.1 1 0 0 1 1 1 0 GWT1 His_Me_b4a2 PF18275.1 ORF139766 - 3.8 7.7 6.6 1.1 9.4 2.6 1.9 1 1 1 2 2 2 0 His-Me finger endonuclease beta4-alpha2 domain zf-CCHC_6 PF15288.6 ORF138088 - 0.033 14.0 2.1 0.067 13.0 2.1 1.6 1 0 0 1 1 1 0 Zinc knuckle Vps16_C PF04840.12 ORF13794 - 0.031 13.3 0.0 0.031 13.3 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region Macoilin PF09726.9 ORF137518 - 0.024 13.2 0.1 0.025 13.2 0.1 1.0 1 0 0 1 1 1 0 Macoilin family Rad60-SLD PF11976.8 ORF137176 - 0.16 11.8 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like CDC4_D PF16856.5 ORF137016 - 0.0074 16.1 0.9 0.0096 15.8 0.9 1.3 1 1 0 1 1 1 1 Cell division control protein 4 dimerisation domain Fer2_BFD PF04324.15 ORF137011 - 1.2e-14 54.3 0.1 1.4e-14 54.1 0.1 1.1 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain Sugar_tr PF00083.24 ORF136989 - 1.2e-09 37.5 0.1 1.2e-09 37.5 0.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter COX1 PF00115.20 ORF136989 - 0.027 13.4 0.2 0.027 13.3 0.2 1.0 1 0 0 1 1 1 0 Cytochrome C and Quinol oxidase polypeptide I GDE_N_bis PF14742.6 ORF136682 - 0.16 11.5 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of (some) glycogen debranching enzymes Nop10p PF04135.12 ORF136614 - 6.8e-20 70.8 0.7 8.1e-20 70.6 0.7 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family EF-hand_12 PF17901.1 ORF136397 - 0.088 13.3 0.0 0.1 13.1 0.0 1.0 1 0 0 1 1 1 0 EF-hand fold domain Ornatin PF02088.15 ORF13605 - 0.14 12.0 0.1 0.2 11.4 0.1 1.2 1 0 0 1 1 1 0 Ornatin Lipase_GDSL_lke PF16255.5 ORF135466 - 0.1 11.9 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase DUF3638 PF12340.8 ORF13482 - 0.068 12.5 0.1 0.072 12.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3638) AmpE PF17113.5 ORF134267 - 0.14 11.5 1.8 0.15 11.4 1.8 1.0 1 0 0 1 1 1 0 Regulatory signalling modulator protein AmpE PQQ PF01011.21 ORF134144 - 0.21 11.6 1.7 2.5 8.2 1.1 2.4 2 0 0 2 2 2 0 PQQ enzyme repeat Pro_sub2 PF18513.1 ORF134083 - 0.06 13.5 0.8 0.063 13.5 0.8 1.1 1 0 0 1 1 1 0 Prodomain subtilisin 2 TetR_C_9 PF14514.6 ORF133966 - 0.009 16.1 0.0 0.01 16.0 0.0 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain DUF1815 PF08844.10 ORF133404 - 0.047 13.7 0.3 0.056 13.4 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1815) Thioredoxin_4 PF13462.6 ORF133351 - 0.0032 17.7 0.0 0.0036 17.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF133351 - 0.033 14.0 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Herpes_PAP PF03325.13 ORF133351 - 0.13 11.8 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus polymerase accessory protein Staphostatin_A PF09022.10 ORF133305 - 0.091 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Staphostatin A Hs1pro-1_N PF07231.12 ORF132505 - 0.099 12.4 0.1 0.1 12.4 0.1 1.0 1 0 0 1 1 1 0 Hs1pro-1 N-terminus Dynamitin PF04912.14 ORF131676 - 0.015 14.7 0.1 0.016 14.6 0.1 1.1 1 0 0 1 1 1 0 Dynamitin Phasin PF05597.11 ORF131676 - 0.06 13.3 0.5 0.07 13.1 0.5 1.1 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) YPEB PF14620.6 ORF130930 - 0.11 11.8 3.4 0.11 11.8 3.4 1.0 1 0 0 1 1 1 0 YpeB sporulation TMPIT PF07851.13 ORF130930 - 1.4 8.1 4.6 1.5 8.0 4.6 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF1148 PF06618.11 ORF129874 - 0.016 15.4 2.0 0.017 15.3 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1148) SeqA_N PF17206.3 ORF129588 - 0.0026 17.0 0.1 0.0062 15.8 0.1 1.6 1 1 0 1 1 1 1 SeqA protein N-terminal domain DUF3830 PF12903.7 ORF128688 - 0.17 11.6 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3830) ATPase-cat_bd PF12156.8 ORF128477 - 0.048 14.4 0.0 0.049 14.4 0.0 1.1 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase DUF2012 PF09430.10 ORF128374 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2012) bZIP_1 PF00170.21 ORF127924 - 7.6e-07 29.1 6.7 1e-06 28.7 6.7 1.2 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF127924 - 0.00055 20.0 8.5 0.001 19.1 7.7 1.7 1 1 1 2 2 2 1 Basic region leucine zipper SlyX PF04102.12 ORF127924 - 0.00082 19.9 0.5 0.001 19.6 0.5 1.2 1 0 0 1 1 1 1 SlyX ABC_tran_CTD PF16326.5 ORF127924 - 0.0011 19.2 2.7 0.0013 18.9 2.7 1.1 1 0 0 1 1 1 1 ABC transporter C-terminal domain RasGAP_C PF03836.15 ORF127924 - 0.0089 16.2 2.5 0.0094 16.1 2.5 1.0 1 0 0 1 1 1 1 RasGAP C-terminus COG5 PF10392.9 ORF127924 - 0.0095 16.1 0.5 0.0095 16.1 0.5 1.0 1 0 0 1 1 1 1 Golgi transport complex subunit 5 PI3K_P85_iSH2 PF16454.5 ORF127924 - 0.012 15.2 3.6 0.013 15.1 3.6 1.1 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF16 PF01519.16 ORF127924 - 0.015 15.8 2.5 0.018 15.6 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 Sod_Fe_N PF00081.22 ORF127924 - 0.018 15.5 0.2 0.027 15.0 0.2 1.3 1 1 0 1 1 1 0 Iron/manganese superoxide dismutases, alpha-hairpin domain Surfac_D-trimer PF09006.11 ORF127924 - 0.024 14.5 0.0 0.038 13.9 0.0 1.5 1 1 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation DUF5595 PF18077.1 ORF127924 - 0.043 13.9 1.4 0.063 13.4 1.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5595) Ax_dynein_light PF10211.9 ORF127924 - 0.047 13.6 4.2 0.051 13.5 4.2 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain BRE1 PF08647.11 ORF127924 - 0.048 13.7 6.6 0.054 13.6 6.6 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase DUF3450 PF11932.8 ORF127924 - 0.049 12.9 3.4 0.057 12.7 3.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Arm-DNA-bind_5 PF17293.2 ORF127924 - 0.075 13.5 5.1 0.12 12.8 5.1 1.5 1 1 0 1 1 1 0 Arm DNA-binding domain Mto2_bdg PF12808.7 ORF127924 - 0.076 13.3 5.7 0.06 13.7 4.3 1.5 1 1 0 1 1 1 0 Micro-tubular organiser Mto1 C-term Mto2-binding region XhlA PF10779.9 ORF127924 - 0.17 12.1 5.0 0.27 11.5 5.0 1.3 1 1 0 1 1 1 0 Haemolysin XhlA GrpE PF01025.19 ORF127924 - 0.18 11.5 4.8 0.19 11.4 4.8 1.0 1 0 0 1 1 1 0 GrpE DUF4140 PF13600.6 ORF127924 - 0.22 12.0 3.2 0.28 11.6 3.2 1.1 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Atg14 PF10186.9 ORF127924 - 0.3 10.1 5.8 0.33 10.0 5.8 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1192 PF06698.11 ORF127924 - 9.9 6.3 8.7 0.86 9.7 1.8 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1192) Tmemb_9 PF05434.11 ORF127720 - 0.0025 17.7 1.0 0.0026 17.7 1.0 1.1 1 0 0 1 1 1 1 TMEM9 SRPRB PF09439.10 ORF127720 - 0.1 12.0 0.6 0.13 11.6 0.0 1.4 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Pox_EPC_I2-L1 PF12575.8 ORF127558 - 0.045 14.0 0.3 0.057 13.7 0.3 1.3 1 1 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 Adeno_E3_CR1 PF02440.15 ORF127558 - 0.069 12.9 1.1 0.11 12.2 1.1 1.5 1 1 0 1 1 1 0 Adenovirus E3 region protein CR1 CLAMP PF14769.6 ORF127343 - 0.046 14.2 0.1 0.05 14.0 0.1 1.1 1 0 0 1 1 1 0 Flagellar C1a complex subunit C1a-32 Ssl1 PF04056.14 ORF127341 - 0.031 14.1 0.2 0.033 14.0 0.2 1.1 1 0 0 1 1 1 0 Ssl1-like Beta-TrCP_D PF12125.8 ORF127019 - 0.025 14.5 0.4 0.037 13.9 0.4 1.2 1 0 0 1 1 1 0 D domain of beta-TrCP Bunya_NS-S PF01104.17 ORF126305 - 0.083 12.7 5.1 0.086 12.7 5.1 1.3 1 1 0 1 1 1 0 Bunyavirus non-structural protein NS-s Zap1_zf2 PF18217.1 ORF12500 - 0.074 13.1 0.1 0.074 13.1 0.1 1.7 2 0 0 2 2 2 0 Zap1 zinc finger 2 SdpI PF13630.6 ORF12500 - 0.075 13.2 0.7 0.076 13.1 0.7 1.1 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF1041 PF06292.17 ORF124814 - 0.069 13.6 0.2 0.076 13.4 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1041) RTT107_BRCT_6 PF16771.5 ORF124490 - 0.0045 17.1 0.0 0.0047 17.1 0.0 1.2 1 0 0 1 1 1 1 Regulator of Ty1 transposition protein 107 BRCT domain AAA_lid_8 PF17868.1 ORF124490 - 0.066 13.1 0.0 0.097 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain Edc3_linker PF16598.5 ORF124418 - 0.069 13.8 1.9 0.18 12.5 1.9 1.6 1 1 0 1 1 1 0 Linker region of enhancer of mRNA-decapping protein 3 Staphostatin_A PF09022.10 ORF123900 - 0.091 12.7 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Staphostatin A zf-CCHC_6 PF15288.6 ORF123803 - 0.033 14.0 2.1 0.067 13.0 2.1 1.6 1 0 0 1 1 1 0 Zinc knuckle PA28_beta PF02252.18 ORF123738 - 0.082 12.6 0.1 0.098 12.3 0.1 1.1 1 0 0 1 1 1 0 Proteasome activator pa28 beta subunit FlgM PF04316.13 ORF123728 - 0.0045 17.3 0.0 0.007 16.7 0.0 1.4 1 0 0 1 1 1 1 Anti-sigma-28 factor, FlgM Perilipin PF03036.16 ORF123728 - 0.007 15.4 0.5 0.0075 15.3 0.5 1.0 1 0 0 1 1 1 1 Perilipin family DUF4041 PF13250.6 ORF123728 - 0.018 14.9 2.1 0.74 9.7 0.9 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4041) Tox-REase-2 PF15646.6 ORF123728 - 0.045 13.9 0.3 0.048 13.9 0.3 1.0 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 2 BET PF17035.5 ORF12322 - 6.2e-06 26.3 0.2 8.2e-06 25.9 0.2 1.1 1 0 0 1 1 1 1 Bromodomain extra-terminal - transcription regulation NifW PF03206.14 ORF12322 - 0.061 13.8 0.1 0.1 13.1 0.1 1.5 1 1 0 1 1 1 0 Nitrogen fixation protein NifW LRRNT PF01462.18 ORF122633 - 6.4 6.5 10.6 2 8.1 1.6 2.5 2 1 0 2 2 2 0 Leucine rich repeat N-terminal domain Tombus_P19 PF03220.13 ORF122297 - 0.079 12.7 0.0 0.084 12.6 0.0 1.1 1 0 0 1 1 1 0 Tombusvirus P19 core protein Inhibitor_I66 PF16850.5 ORF122297 - 0.14 12.0 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase inhibitor I66 MAR_sialic_bdg PF10564.9 ORF121348 - 0.077 13.0 3.9 0.082 13.0 3.9 1.1 1 0 0 1 1 1 0 Sialic-acid binding micronemal adhesive repeat UBM PF14377.6 ORF121282 - 0.026 13.9 0.5 0.42 10.1 0.0 2.2 2 0 0 2 2 2 0 Ubiquitin binding region Vps16_C PF04840.12 ORF120319 - 0.031 13.3 0.0 0.031 13.3 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region AreA_N PF07573.11 ORF119748 - 0.035 14.7 0.2 0.042 14.5 0.2 1.1 1 0 0 1 1 1 0 Nitrogen regulatory protein AreA N terminus RTT107_BRCT_6 PF16771.5 ORF118950 - 0.0045 17.1 0.0 0.0047 17.1 0.0 1.2 1 0 0 1 1 1 1 Regulator of Ty1 transposition protein 107 BRCT domain AAA_lid_8 PF17868.1 ORF118950 - 0.066 13.1 0.0 0.097 12.6 0.0 1.2 1 0 0 1 1 1 0 AAA lid domain Op_neuropeptide PF08035.11 ORF118856 - 0.13 12.2 0.3 0.19 11.6 0.3 1.3 1 0 0 1 1 1 0 Opioids neuropeptide Roc PF08477.13 ORF117519 - 1.2e-07 31.9 0.0 1.6e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF117519 - 4e-07 29.8 0.1 4.8e-07 29.5 0.1 1.1 1 0 0 1 1 1 1 Ras family AAA_7 PF12775.7 ORF117519 - 0.0007 19.2 0.0 0.00075 19.1 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_22 PF13401.6 ORF117519 - 0.02 15.2 0.0 0.023 15.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF117519 - 0.023 14.4 0.0 0.026 14.3 0.0 1.2 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF117519 - 0.03 14.7 0.0 0.03 14.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 ORF117519 - 0.031 14.3 0.0 0.031 14.3 0.0 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_5 PF07728.14 ORF117519 - 0.046 13.7 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) TniB PF05621.11 ORF117519 - 0.052 13.0 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein AAA_24 PF13479.6 ORF117519 - 0.082 12.6 0.0 0.097 12.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain Arf PF00025.21 ORF117519 - 0.12 11.8 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family SRPRB PF09439.10 ORF117519 - 0.13 11.7 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Tissue_fac PF01108.17 ORF117356 - 0.0089 15.9 0.0 0.0097 15.7 0.0 1.1 1 0 0 1 1 1 1 Tissue factor DUF1351 PF07083.11 ORF117221 - 0.05 13.4 0.1 0.058 13.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1351) FIIND PF13553.6 ORF116929 - 0.088 12.2 0.0 0.099 12.0 0.0 1.0 1 0 0 1 1 1 0 Function to find DEC-1_N PF04625.13 ORF116756 - 0.05 12.6 0.0 0.05 12.6 0.0 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Vps16_C PF04840.12 ORF116481 - 0.031 13.3 0.0 0.031 13.3 0.0 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region DUF4745 PF15923.5 ORF116078 - 0.028 14.4 0.5 0.028 14.4 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4745) FIIND PF13553.6 ORF115446 - 0.088 12.2 0.0 0.099 12.0 0.0 1.0 1 0 0 1 1 1 0 Function to find DUF423 PF04241.15 ORF115077 - 0.09 13.0 3.5 0.11 12.7 3.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF423) DUF4173 PF13777.6 ORF115077 - 0.38 10.1 8.8 0.42 10.0 8.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) Deltameth_res PF16020.5 ORF115077 - 2.2 8.2 5.7 0.56 10.1 2.0 1.8 1 1 1 2 2 2 0 Deltamethrin resistance Myosin_TH1 PF06017.13 ORF114678 - 3e-06 27.0 0.9 3e-06 27.0 0.9 1.0 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding DUF2509 PF10713.9 ORF113299 - 0.038 14.1 0.0 0.038 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2509) Flp_C PF05202.12 ORF113087 - 0.063 12.8 0.1 0.063 12.8 0.1 1.1 1 0 0 1 1 1 0 Recombinase Flp protein PA28_beta PF02252.18 ORF113023 - 0.082 12.6 0.1 0.098 12.3 0.1 1.1 1 0 0 1 1 1 0 Proteasome activator pa28 beta subunit CSTF_C PF14304.6 ORF112868 - 0.094 12.3 1.0 3.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Transcription termination and cleavage factor C-terminal Tissue_fac PF01108.17 ORF112851 - 0.0089 15.9 0.0 0.0097 15.7 0.0 1.1 1 0 0 1 1 1 1 Tissue factor 2TM PF13239.6 ORF112717 - 0.076 13.3 5.5 0.087 13.1 5.5 1.1 1 0 0 1 1 1 0 2TM domain GRAM PF02893.20 ORF112644 - 0.06 13.2 0.1 0.061 13.2 0.1 1.1 1 0 0 1 1 1 0 GRAM domain Plasmod_dom_1 PF09715.10 ORF111942 - 0.014 15.4 0.5 0.022 14.8 0.5 1.4 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) DUF551 PF04448.12 ORF111449 - 0.085 13.8 0.0 0.12 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF551) DUF2715 PF10895.8 ORF111333 - 0.11 12.2 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2715) Conotoxin_I2 PF17557.2 ORF111284 - 0.037 14.2 8.9 0.048 13.8 8.2 1.7 1 1 0 1 1 1 0 I2-superfamily conotoxins CDC73_C PF05179.14 ORF111233 - 2.7e-11 43.4 0.0 3e-11 43.3 0.0 1.0 1 0 0 1 1 1 1 RNA pol II accessory factor, Cdc73 family, C-terminal Plasmod_dom_1 PF09715.10 ORF111048 - 0.014 15.4 0.5 0.022 14.8 0.5 1.4 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) UPF0052 PF01933.18 ORF110782 - 0.044 13.0 0.0 0.044 13.0 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0052 Adeno_E3_CR2 PF02439.15 ORF109435 - 0.055 13.2 2.7 0.096 12.5 2.7 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 DUF3736 PF12540.8 ORF109357 - 0.08 13.1 0.1 0.088 12.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3736) Stc1 PF12898.7 ORF109295 - 0.28 11.7 3.9 0.46 11.1 3.9 1.3 1 0 0 1 1 1 0 Stc1 domain PRD PF00874.20 ORF109268 - 0.022 15.0 0.7 0.028 14.7 0.7 1.1 1 0 0 1 1 1 0 PRD domain BRX PF08381.11 ORF108295 - 0.21 11.0 0.0 0.32 10.4 0.0 1.3 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 MORN PF02493.20 ORF108218 - 2.2e-05 24.1 2.6 0.0033 17.2 0.0 2.3 2 0 0 2 2 2 2 MORN repeat Gemin7 PF11095.8 ORF108218 - 0.15 11.9 0.0 0.18 11.7 0.0 1.0 1 0 0 1 1 1 0 Gem-associated protein 7 (Gemin7) DUF3089 PF11288.8 ORF108130 - 1.3 8.6 3.8 1.4 8.5 3.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) FERM_N_2 PF18038.1 ORF108066 - 0.044 14.6 0.1 0.044 14.6 0.1 1.0 1 0 0 1 1 1 0 FERM N-terminal domain UPF0688 PF15772.5 ORF108066 - 0.13 12.5 1.4 0.13 12.5 1.4 1.0 1 0 0 1 1 1 0 UPF0688 family Rad60-SLD PF11976.8 ORF107947 - 1.6e-09 37.4 0.0 1.8e-09 37.3 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like PAP2_3 PF14378.6 ORF107905 - 0.0098 15.6 0.5 0.012 15.3 0.5 1.1 1 0 0 1 1 1 1 PAP2 superfamily CBP_BcsR PF10945.8 ORF107136 - 0.025 14.0 0.3 0.048 13.1 0.3 1.5 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR MNNL PF07657.13 ORF10708 - 0.024 14.7 7.2 0.027 14.5 7.2 1.1 1 0 0 1 1 1 0 N terminus of Notch ligand WAP PF00095.21 ORF10708 - 0.21 12.0 8.2 0.3 11.5 8.2 1.3 1 1 0 1 1 1 0 WAP-type (Whey Acidic Protein) 'four-disulfide core' Potassium_chann PF11404.8 ORF10708 - 0.21 11.4 0.2 0.21 11.4 0.2 1.9 2 0 0 2 2 2 0 Potassium voltage-gated channel DUF3263 PF11662.8 ORF106595 - 0.4 10.6 3.8 0.68 9.8 3.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3263) NADH-G_4Fe-4S_3 PF10588.9 ORF105192 - 0.17 11.4 1.3 0.25 10.9 1.3 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AGS_C PF18134.1 ORF104973 - 0.11 12.5 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Adenylyl/Guanylyl and SMODS C-terminal sensor domain CobW_C PF07683.14 ORF104422 - 0.054 13.4 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 Cobalamin synthesis protein cobW C-terminal domain START PF01852.19 ORF103443 - 0.16 11.4 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 START domain DUF2012 PF09430.10 ORF103061 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2012) Pkinase PF00069.25 ORF10240 - 0.032 13.6 0.0 0.093 12.1 0.0 1.6 2 0 0 2 2 2 0 Protein kinase domain Plasmod_dom_1 PF09715.10 ORF102170 - 0.014 15.4 0.5 0.022 14.8 0.5 1.4 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) GSK-3_bind PF05350.12 ORF101935 - 0.085 12.2 1.7 0.11 11.8 1.7 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding DUF1586 PF07625.11 ORF101736 - 0.057 13.5 0.3 0.083 13.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1586) CbiG_N PF11760.8 ORF100807 - 0.056 13.4 0.0 0.065 13.3 0.0 1.1 1 0 0 1 1 1 0 Cobalamin synthesis G N-terminal DUF4186 PF13811.6 ORF100770 - 2.5e-25 88.6 0.9 2.9e-25 88.4 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4186) DUF1244 PF06844.11 ORF100770 - 0.015 15.4 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1244) GFO_IDH_MocA_C PF02894.17 ORF10058 - 0.18 11.8 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Oxidoreductase family, C-terminal alpha/beta domain DUF3539 PF12058.8 ORF100367 - 0.14 12.3 0.1 0.17 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3539) Nop10p PF04135.12 ORF100295 - 6.8e-20 70.8 0.7 8.1e-20 70.6 0.7 1.1 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family DUF3892 PF13031.6 NODE_85648_length_187_cov_0.789474_g77707_i0reverse_frame_1 - 0.058 14.0 0.3 0.065 13.9 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3892) Varsurf_PPLC PF03490.13 NODE_85647_length_187_cov_0.789474_g77706_i0forward_frame_1 - 0.16 11.9 0.4 0.23 11.4 0.4 1.2 1 0 0 1 1 1 0 Variant-surface-glycoprotein phospholipase C DUF3915 PF13054.6 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_1 - 0.00051 20.0 0.5 0.00051 20.0 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_1 - 0.11 10.8 7.2 0.11 10.7 7.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family SUR7 PF06687.12 NODE_85642_length_187_cov_0.894737_g77701_i0reverse_frame_1 - 6.2 6.4 19.7 7.3 6.2 19.7 1.0 1 0 0 1 1 1 0 SUR7/PalI family Cactin_mid PF10312.9 NODE_85640_length_187_cov_0.914474_g77699_i0forward_frame_1 - 0.0017 18.1 1.4 0.0017 18.1 1.4 1.0 1 0 0 1 1 1 1 Conserved mid region of cactin DUF1154 PF06631.11 NODE_85640_length_187_cov_0.914474_g77699_i0forward_frame_1 - 0.81 9.8 6.9 6.8 6.8 6.9 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1154) SecIII_SopE_N PF05364.14 NODE_85635_length_187_cov_0.947368_g77694_i0forward_frame_1 - 0.16 12.1 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus Ornatin PF02088.15 NODE_85628_length_187_cov_0.973684_g77687_i0reverse_frame_1 - 0.021 14.6 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 Ornatin Secretin PF00263.21 NODE_85609_length_187_cov_1.039474_g77668_i0forward_frame_1 - 0.076 12.7 0.0 0.095 12.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial type II and III secretion system protein Holin_BhlA PF10960.8 NODE_85605_length_187_cov_1.046053_g77664_i0reverse_frame_1 - 0.024 14.6 0.4 0.048 13.6 0.4 1.5 1 0 0 1 1 1 0 BhlA holin family V_ATPase_I PF01496.19 NODE_85605_length_187_cov_1.046053_g77664_i0reverse_frame_1 - 0.053 11.4 0.7 0.055 11.4 0.7 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DHR10 PF18595.1 NODE_85605_length_187_cov_1.046053_g77664_i0reverse_frame_1 - 0.15 12.2 0.1 0.17 12.0 0.1 1.1 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain zf_C2H2_13 PF18508.1 NODE_85604_length_187_cov_1.046053_g77663_i0reverse_frame_1 - 0.14 11.8 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Zinc finger domain CNOT1_HEAT_N PF16419.5 NODE_85601_length_187_cov_1.046053_g77660_i0forward_frame_1 - 0.024 14.3 1.1 0.027 14.1 1.1 1.0 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 HEAT repeat Phage_holin_4_1 PF05105.12 NODE_85601_length_187_cov_1.046053_g77660_i0forward_frame_1 - 0.11 12.7 0.0 0.12 12.5 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage holin family Papo_T_antigen PF02380.15 NODE_85600_length_187_cov_1.046053_g77659_i0reverse_frame_1 - 0.097 12.8 0.2 0.1 12.8 0.2 1.1 1 0 0 1 1 1 0 T-antigen specific domain zf_ZIC PF18366.1 NODE_85598_length_187_cov_1.046053_g77657_i0reverse_frame_1 - 0.1 12.7 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Zic proteins zinc finger domain MTP18 PF10558.9 NODE_85598_length_187_cov_1.046053_g77657_i0forward_frame_1 - 0.017 15.1 0.1 0.017 15.1 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial 18 KDa protein (MTP18) CUTL PF16557.5 NODE_85593_length_187_cov_1.046053_g77652_i0forward_frame_1 - 0.027 14.7 0.0 0.04 14.1 0.0 1.3 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB Fungus-induced PF10917.8 NODE_85591_length_187_cov_1.046053_g77650_i0forward_frame_1 - 0.21 12.0 0.6 0.29 11.5 0.6 1.2 1 0 0 1 1 1 0 Fungus-induced protein hEGF PF12661.7 NODE_85591_length_187_cov_1.046053_g77650_i0forward_frame_1 - 0.55 11.0 0.8 0.55 11.0 0.8 2.6 3 0 0 3 3 3 0 Human growth factor-like EGF C1ORF64 PF15547.6 NODE_85582_length_187_cov_1.052632_g77641_i0reverse_frame_1 - 0.072 13.6 2.6 0.079 13.4 2.6 1.0 1 0 0 1 1 1 0 Steroid receptor-associated and regulated protein PBP1_TM PF14812.6 NODE_85579_length_187_cov_1.052632_g77638_i0forward_frame_1 - 0.0042 17.4 0.5 0.0051 17.2 0.5 1.1 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal CENP-B_dimeris PF09026.10 NODE_85579_length_187_cov_1.052632_g77638_i0forward_frame_1 - 0.0084 16.5 0.2 0.0084 16.5 0.2 1.1 1 0 0 1 1 1 1 Centromere protein B dimerisation domain zf-CCCH_6 PF18585.1 NODE_85572_length_187_cov_1.052632_g77631_i0forward_frame_1 - 0.01 15.7 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 NMN_transporter PF04973.12 NODE_85568_length_187_cov_1.052632_g77627_i0forward_frame_1 - 0.00031 20.8 2.7 0.00039 20.4 2.7 1.2 1 0 0 1 1 1 1 Nicotinamide mononucleotide transporter zf-RING_2 PF13639.6 NODE_85564_length_187_cov_1.052632_g77623_i0forward_frame_1 - 0.00052 20.3 5.2 0.00052 20.3 5.2 1.9 1 1 1 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 NODE_85564_length_187_cov_1.052632_g77623_i0forward_frame_1 - 0.011 15.8 6.6 0.011 15.8 6.6 2.2 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_10 PF16685.5 NODE_85564_length_187_cov_1.052632_g77623_i0forward_frame_1 - 0.035 14.3 7.4 0.051 13.7 7.4 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-RING_5 PF14634.6 NODE_85564_length_187_cov_1.052632_g77623_i0forward_frame_1 - 0.65 10.0 13.0 7.1 6.7 13.0 2.2 1 1 0 1 1 1 0 zinc-RING finger domain zf-C3HC4_2 PF13923.6 NODE_85564_length_187_cov_1.052632_g77623_i0forward_frame_1 - 0.79 9.6 12.3 0.27 11.1 5.8 2.3 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 NODE_85564_length_187_cov_1.052632_g77623_i0forward_frame_1 - 8.3 6.7 17.8 1.9 8.7 10.2 3.1 1 1 0 2 2 2 0 zinc finger of C3HC4-type, RING DNA_pol_A_exoN PF18305.1 NODE_85560_length_187_cov_1.052632_g77619_i0forward_frame_1 - 0.06 13.6 0.0 0.072 13.4 0.0 1.1 1 0 0 1 1 1 0 3' to 5' exonuclease C-terminal domain Polyoma_agno PF01736.16 NODE_85555_length_187_cov_1.052632_g77614_i0forward_frame_1 - 0.086 12.6 1.6 0.1 12.3 0.6 1.7 2 1 0 2 2 2 0 Polyomavirus agnoprotein AvrM-A PF18241.1 NODE_85548_length_187_cov_1.052632_g77607_i0forward_frame_1 - 0.3 11.5 10.6 0.31 11.4 10.6 1.1 1 0 0 1 1 1 0 Flax-rust effector AvrM-A zf-RING_10 PF16685.5 NODE_85546_length_187_cov_1.052632_g77605_i0forward_frame_1 - 0.033 14.3 1.9 0.032 14.4 1.9 1.2 1 1 0 1 1 1 0 zinc RING finger of MSL2 Cu-binding_MopE PF11617.8 NODE_85538_length_187_cov_1.052632_g77597_i0forward_frame_1 - 0.027 14.6 1.4 0.11 12.7 0.1 2.1 2 0 0 2 2 2 0 Putative metal-binding motif zf-DNA_Pol PF08996.10 NODE_85538_length_187_cov_1.052632_g77597_i0forward_frame_1 - 0.068 12.9 1.1 0.08 12.7 1.1 1.0 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger zf-CCCH_6 PF18585.1 NODE_85520_length_187_cov_1.065789_g77579_i0reverse_frame_1 - 0.064 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 zf-primase PF09329.11 NODE_85518_length_187_cov_1.085526_g77577_i0reverse_frame_1 - 0.9 9.4 7.0 6 6.8 7.0 2.0 1 1 0 1 1 1 0 Primase zinc finger Antimicrobial18 PF08130.11 NODE_85518_length_187_cov_1.085526_g77577_i0forward_frame_1 - 1.3 9.2 4.7 1.5 9.0 1.1 2.1 1 1 1 2 2 2 0 Type A lantibiotic family NAD_binding_6 PF08030.12 NODE_85516_length_187_cov_1.098684_g77575_i0reverse_frame_1 - 0.00041 20.5 0.0 0.00046 20.3 0.0 1.0 1 0 0 1 1 1 1 Ferric reductase NAD binding domain Ribosomal_L37e PF01907.19 NODE_85514_length_187_cov_1.111842_g77573_i0forward_frame_1 - 0.018 15.2 0.6 0.025 14.7 0.6 1.2 1 0 0 1 1 1 0 Ribosomal protein L37e Subtilosin_A PF11420.8 NODE_85510_length_187_cov_1.125000_g77569_i0reverse_frame_1 - 0.085 12.8 0.1 5 7.2 0.1 2.4 2 0 0 2 2 2 0 Bacteriocin subtilosin A Resistin PF06954.11 NODE_85504_length_187_cov_1.138158_g77563_i0forward_frame_1 - 0.0011 19.4 1.1 0.0013 19.3 1.1 1.1 1 0 0 1 1 1 1 Resistin FSAP_sig_propep PF03032.15 NODE_85504_length_187_cov_1.138158_g77563_i0forward_frame_1 - 0.12 12.4 0.5 0.17 11.9 0.5 1.2 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide DUF2024 PF09630.10 NODE_85502_length_187_cov_1.144737_g77561_i0forward_frame_1 - 0.15 11.9 0.1 0.17 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) CEP1-DNA_bind PF09287.10 NODE_85496_length_187_cov_1.157895_g77555_i0forward_frame_1 - 0.012 15.3 0.1 0.012 15.2 0.1 1.1 1 0 0 1 1 1 0 CEP-1, DNA binding RHD_dimer PF16179.5 NODE_85494_length_187_cov_1.164474_g77553_i0reverse_frame_1 - 0.11 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Rel homology dimerisation domain Tombus_P19 PF03220.13 NODE_85490_length_187_cov_1.184211_g77549_i0forward_frame_1 - 0.15 11.7 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Tombusvirus P19 core protein UEV PF05743.13 NODE_85489_length_187_cov_1.184211_g77548_i0forward_frame_1 - 0.08 12.8 0.0 0.089 12.7 0.0 1.1 1 0 0 1 1 1 0 UEV domain PPR_2 PF13041.6 NODE_85487_length_187_cov_1.197368_g77546_i0reverse_frame_1 - 0.038 14.2 0.0 0.049 13.8 0.0 1.2 1 0 0 1 1 1 0 PPR repeat family PPR PF01535.20 NODE_85487_length_187_cov_1.197368_g77546_i0reverse_frame_1 - 0.19 12.1 0.0 0.29 11.5 0.0 1.3 1 0 0 1 1 1 0 PPR repeat Ribosomal_L32p PF01783.23 NODE_85484_length_187_cov_1.217105_g77543_i0reverse_frame_1 - 0.73 10.1 7.2 6.5 7.1 0.4 2.3 1 1 1 2 2 2 0 Ribosomal L32p protein family DUF3333 PF11812.8 NODE_85481_length_187_cov_1.223684_g77540_i0reverse_frame_1 - 0.19 11.9 0.2 0.21 11.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) MHC2-interact PF09307.10 NODE_85480_length_187_cov_1.230263_g77539_i0forward_frame_1 - 0.034 14.1 0.0 0.042 13.8 0.0 1.1 1 0 0 1 1 1 0 CLIP, MHC2 interacting F-box_5 PF18511.1 NODE_85479_length_187_cov_1.230263_g77538_i0forward_frame_1 - 0.15 11.7 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 F-box COMP PF11598.8 NODE_85478_length_187_cov_1.230263_g77537_i0forward_frame_1 - 0.074 13.5 1.0 0.11 13.0 1.0 1.2 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein Hydantoinase_B PF02538.14 NODE_85476_length_187_cov_1.236842_g77535_i0forward_frame_1 - 0.39 9.1 3.8 0.45 8.9 3.8 1.0 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase Plasmod_dom_1 PF09715.10 NODE_85470_length_187_cov_1.269737_g77529_i0reverse_frame_1 - 0.081 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) IBB PF01749.20 NODE_85466_length_187_cov_1.296053_g77525_i0reverse_frame_1 - 0.083 13.3 0.9 0.088 13.3 0.9 1.1 1 0 0 1 1 1 0 Importin beta binding domain DUF4269 PF14091.6 NODE_85465_length_187_cov_1.302632_g77524_i0reverse_frame_1 - 0.068 13.4 0.0 0.083 13.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) Chorismate_synt PF01264.21 NODE_85464_length_187_cov_1.302632_g77523_i0forward_frame_1 - 3.2e-12 45.8 0.0 3.4e-12 45.7 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase DUF3099 PF11298.8 NODE_85463_length_187_cov_1.302632_g77522_i0reverse_frame_1 - 0.62 10.2 5.6 0.81 9.9 5.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3099) Strabismus PF06638.11 NODE_85463_length_187_cov_1.302632_g77522_i0reverse_frame_1 - 4.4 5.9 6.8 5.1 5.6 6.8 1.0 1 0 0 1 1 1 0 Strabismus protein Ac110_PIF PF07280.11 NODE_85460_length_187_cov_1.309211_g77519_i0reverse_frame_1 - 0.25 11.2 3.6 0.41 10.5 3.6 1.4 1 0 0 1 1 1 0 Per os infectivity factor AC110 SUKH_5 PF14567.6 NODE_85448_length_187_cov_1.315789_g77507_i0reverse_frame_1 - 0.098 12.4 0.0 0.098 12.4 0.0 1.1 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall Birna_VP2 PF01766.17 NODE_85440_length_187_cov_1.355263_g77499_i0forward_frame_1 - 0.15 11.0 0.0 0.15 11.0 0.0 1.0 1 0 0 1 1 1 0 Birnavirus VP2 protein Neurexophilin PF06312.12 NODE_85430_length_187_cov_1.407895_g77489_i0forward_frame_1 - 0.15 11.5 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Neurexophilin Sterile PF03015.19 NODE_85428_length_187_cov_1.421053_g77487_i0reverse_frame_1 - 0.099 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Male sterility protein Pox_D2 PF04701.13 NODE_85421_length_187_cov_1.434211_g77480_i0forward_frame_1 - 0.028 14.6 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 Pox virus D2 protein Proteasome PF00227.26 NODE_85411_length_187_cov_1.480263_g77470_i0reverse_frame_1 - 5.3e-09 35.8 0.1 5.5e-09 35.8 0.1 1.0 1 0 0 1 1 1 1 Proteasome subunit EamA PF00892.20 NODE_85395_length_187_cov_1.546053_g77454_i0forward_frame_1 - 0.019 15.2 0.0 0.02 15.1 0.0 1.0 1 0 0 1 1 1 0 EamA-like transporter family DUF413 PF04219.12 NODE_85388_length_187_cov_1.565789_g77447_i0forward_frame_1 - 0.14 12.2 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF DivIC PF04977.15 NODE_85385_length_187_cov_1.572368_g77444_i0forward_frame_1 - 0.0028 17.4 1.5 0.0032 17.2 1.5 1.1 1 0 0 1 1 1 1 Septum formation initiator Vps16_C PF04840.12 NODE_85385_length_187_cov_1.572368_g77444_i0forward_frame_1 - 0.014 14.4 0.7 0.014 14.4 0.7 1.0 1 0 0 1 1 1 0 Vps16, C-terminal region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks430.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks430.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks430.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks430.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF726 PF05277.12 NODE_85372_length_187_cov_1.578947_g77431_i0forward_frame_1 - 0.16 10.9 0.0 0.17 10.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF726) SHIPPO-rpt PF07004.12 NODE_85365_length_187_cov_1.578947_g77424_i0forward_frame_1 - 0.033 15.1 0.7 0.05 14.5 0.7 1.3 1 0 0 1 1 1 0 Sperm-tail PG-rich repeat EcoRII-N PF09217.10 NODE_85364_length_187_cov_1.578947_g77423_i0reverse_frame_1 - 0.11 12.2 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Restriction endonuclease EcoRII, N-terminal Kei1 PF08552.11 NODE_85361_length_187_cov_1.578947_g77420_i0forward_frame_1 - 0.032 14.1 1.5 0.035 14.0 1.5 1.0 1 0 0 1 1 1 0 Inositolphosphorylceramide synthase subunit Kei1 DUF423 PF04241.15 NODE_85354_length_187_cov_1.578947_g77413_i0forward_frame_1 - 0.18 12.0 0.5 0.27 11.5 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF423) Arc_PepC_II PF06847.11 NODE_85353_length_187_cov_1.578947_g77412_i0reverse_frame_1 - 0.04 14.4 0.1 0.044 14.3 0.1 1.1 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II Pyrophosphatase PF00719.19 NODE_85353_length_187_cov_1.578947_g77412_i0reverse_frame_1 - 0.062 13.1 0.7 0.07 12.9 0.7 1.0 1 0 0 1 1 1 0 Inorganic pyrophosphatase Plant_tran PF04827.14 NODE_85348_length_187_cov_1.631579_g77407_i0forward_frame_1 - 0.046 13.3 0.1 0.051 13.2 0.1 1.0 1 0 0 1 1 1 0 Plant transposon protein HTH_26 PF13443.6 NODE_85347_length_187_cov_1.631579_g77406_i0reverse_frame_1 - 0.057 13.9 0.0 0.079 13.4 0.0 1.2 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain DUF2688 PF10892.8 NODE_85341_length_187_cov_1.677632_g77400_i0forward_frame_1 - 0.046 13.2 0.1 0.051 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2688) DUF1722 PF08349.11 NODE_85340_length_187_cov_1.677632_g77399_i0reverse_frame_1 - 0.032 14.5 0.1 0.039 14.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) DUF4658 PF15555.6 NODE_85333_length_187_cov_1.710526_g77392_i0reverse_frame_1 - 3.1 7.9 5.4 3.3 7.8 5.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) RNA_pol_N PF01194.17 NODE_85332_length_187_cov_1.717105_g77391_i0forward_frame_1 - 0.16 12.3 0.1 0.16 12.3 0.1 2.1 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit Methyltransf_23 PF13489.6 NODE_85329_length_187_cov_1.730263_g77388_i0reverse_frame_1 - 0.014 15.2 0.0 0.014 15.2 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_85329_length_187_cov_1.730263_g77388_i0reverse_frame_1 - 0.048 14.3 0.0 0.051 14.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_85329_length_187_cov_1.730263_g77388_i0reverse_frame_1 - 0.11 12.3 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain DUF2684 PF10885.8 NODE_85329_length_187_cov_1.730263_g77388_i0forward_frame_1 - 0.073 13.2 0.2 0.08 13.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2684) Pox_F17 PF04767.12 NODE_85322_length_187_cov_1.756579_g77381_i0forward_frame_1 - 0.19 12.3 4.2 0.21 12.1 4.2 1.1 1 0 0 1 1 1 0 DNA-binding 11 kDa phosphoprotein PALP PF00291.25 NODE_85321_length_187_cov_1.763158_g77380_i0reverse_frame_1 - 9e-10 38.4 0.1 9.7e-10 38.3 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CAP_C PF08603.11 NODE_85309_length_187_cov_1.815789_g77368_i0reverse_frame_1 - 1.7 8.3 10.2 2 8.0 10.2 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) C terminal DUF4832 PF16116.5 NODE_85304_length_187_cov_1.835526_g77363_i0reverse_frame_1 - 0.1 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4832) DUF3306 PF11748.8 NODE_85293_length_187_cov_1.848684_g77352_i0forward_frame_1 - 0.14 13.1 0.0 0.15 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3306) SAS4 PF15460.6 NODE_85290_length_187_cov_1.855263_g77349_i0forward_frame_1 - 0.075 13.1 0.0 0.083 13.0 0.0 1.1 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 Endonuclea_NS_2 PF13930.6 NODE_85287_length_187_cov_1.901316_g77346_i0reverse_frame_1 - 0.073 13.2 1.5 0.083 13.0 1.5 1.0 1 0 0 1 1 1 0 DNA/RNA non-specific endonuclease COMM_domain PF07258.14 NODE_85286_length_187_cov_1.907895_g77345_i0reverse_frame_1 - 0.093 12.9 0.5 0.12 12.5 0.5 1.2 1 0 0 1 1 1 0 COMM domain Zds_C PF08632.10 NODE_85269_length_187_cov_2.098684_g77328_i0forward_frame_1 - 0.0068 16.1 0.4 0.011 15.5 0.4 1.4 1 0 0 1 1 1 1 Activator of mitotic machinery Cdc14 phosphatase activation C-term PCNA_N PF00705.18 NODE_85263_length_187_cov_2.111842_g77322_i0reverse_frame_1 - 0.00015 21.5 0.0 0.00019 21.2 0.0 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Phage_TAC_4 PF08748.11 NODE_85259_length_187_cov_2.177632_g77318_i0reverse_frame_1 - 0.03 14.6 0.2 0.034 14.4 0.2 1.1 1 0 0 1 1 1 0 Phage tail assembly chaperone zf_C2H2_13 PF18508.1 NODE_85257_length_187_cov_2.243421_g77316_i0reverse_frame_1 - 0.055 13.1 1.9 1.9 8.2 0.1 2.4 1 1 1 2 2 2 0 Zinc finger domain DUF2153 PF09921.9 NODE_85246_length_187_cov_2.309211_g77305_i0forward_frame_1 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2153) Inhibitor_I67 PF11405.8 NODE_85245_length_187_cov_2.315789_g77304_i0reverse_frame_1 - 0.052 13.8 0.6 0.1 12.9 0.6 1.4 1 0 0 1 1 1 0 Bromelain inhibitor VI DUF4915 PF16261.5 NODE_85244_length_187_cov_2.315789_g77303_i0forward_frame_1 - 0.084 12.1 0.0 0.091 12.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4915) Arm_vescicular PF18770.1 NODE_85238_length_187_cov_2.506579_g77297_i0forward_frame_1 - 0.06 13.3 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor DUF4528 PF15031.6 NODE_85237_length_187_cov_2.513158_g77296_i0reverse_frame_1 - 0.1 12.6 0.1 0.1 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4528) Kinesin PF00225.23 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 8.1e-15 54.6 0.2 8.1e-15 54.6 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 1.6e-10 41.1 0.1 1.7e-10 41.1 0.1 1.1 1 0 0 1 1 1 1 Microtubule binding DEAD PF00270.29 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.014 15.1 0.0 0.014 15.1 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase AAA_7 PF12775.7 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.04 13.4 0.1 0.041 13.4 0.1 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region Zeta_toxin PF06414.12 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.059 12.6 0.0 0.071 12.4 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin Bac_DnaA PF00308.18 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_16 PF13191.6 NODE_85229_length_187_cov_2.638158_g77288_i0reverse_frame_1 - 0.23 11.8 0.0 0.23 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AARP2CN PF08142.12 NODE_85223_length_187_cov_2.763158_g77282_i0reverse_frame_1 - 0.05 13.7 0.0 0.054 13.6 0.0 1.1 1 0 0 1 1 1 0 AARP2CN (NUC121) domain CBM9_1 PF06452.11 NODE_85222_length_187_cov_2.776316_g77281_i0reverse_frame_1 - 0.13 12.1 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Carbohydrate family 9 binding domain-like zf-C2H2 PF00096.26 NODE_85220_length_187_cov_2.861842_g77279_i0reverse_frame_1 - 0.043 14.3 5.9 0.043 14.3 5.9 2.1 2 0 0 2 2 2 0 Zinc finger, C2H2 type Jas PF16135.5 NODE_85220_length_187_cov_2.861842_g77279_i0reverse_frame_1 - 0.2 11.8 5.6 0.22 11.7 5.6 1.2 1 0 0 1 1 1 0 TPL-binding domain in jasmonate signalling YycH PF07435.11 NODE_85217_length_187_cov_2.940789_g77276_i0reverse_frame_1 - 0.022 13.8 0.0 0.023 13.7 0.0 1.0 1 0 0 1 1 1 0 YycH protein COX8 PF02285.15 NODE_85217_length_187_cov_2.940789_g77276_i0reverse_frame_1 - 0.11 12.4 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIII OSTbeta PF15048.6 NODE_85216_length_187_cov_3.032895_g77275_i0reverse_frame_1 - 0.047 13.8 0.5 0.059 13.5 0.5 1.4 1 1 0 1 1 1 0 Organic solute transporter subunit beta protein TMEM125 PF15109.6 NODE_85212_length_187_cov_3.171053_g77271_i0forward_frame_1 - 0.0073 16.6 0.2 0.008 16.5 0.2 1.2 1 0 0 1 1 1 1 TMEM125 protein family SCFA_trans PF02667.14 NODE_85207_length_187_cov_3.651316_g77266_i0forward_frame_1 - 9.8e-26 90.7 0.5 1e-25 90.7 0.5 1.0 1 0 0 1 1 1 1 Short chain fatty acid transporter DUF4910 PF16254.5 NODE_85206_length_187_cov_3.828947_g77265_i0reverse_frame_1 - 0.16 10.8 0.0 0.16 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4910) DUF2650 PF10853.8 NODE_85204_length_187_cov_3.875000_g77263_i0forward_frame_1 - 0.34 10.6 2.1 12 5.7 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2650) SNURF PF07192.11 NODE_85197_length_187_cov_7.967105_g77256_i0reverse_frame_1 - 0.094 12.6 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 SNURF/RPN4 protein RNA_pol_Rpb2_4 PF04566.13 NODE_85197_length_187_cov_7.967105_g77256_i0forward_frame_1 - 0.11 12.8 0.0 1.9 8.8 0.0 2.0 2 0 0 2 2 2 0 RNA polymerase Rpb2, domain 4 Response_reg PF00072.24 NODE_85189_length_187_cov_22.572368_g77248_i0reverse_frame_1 - 4.2e-10 39.8 0.0 4.8e-10 39.6 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain RP854 PF17460.2 NODE_85189_length_187_cov_22.572368_g77248_i0reverse_frame_1 - 0.065 13.0 0.1 0.068 12.9 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein RP854 TMF_DNA_bd PF12329.8 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 0.0062 16.5 15.3 0.0068 16.4 15.3 1.0 1 0 0 1 1 1 1 TATA element modulatory factor 1 DNA binding DUF2147 PF09917.9 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 0.064 13.9 5.7 0.075 13.7 5.7 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2147) DUF3450 PF11932.8 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 0.14 11.5 4.5 0.15 11.4 4.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF3987 PF13148.6 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 1.6 7.6 6.3 1.8 7.5 6.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) TMPIT PF07851.13 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 2.2 7.5 7.8 2.2 7.5 7.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF4407 PF14362.6 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 3.5 6.9 6.4 3.7 6.8 6.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4337 PF14235.6 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_1 - 4.4 7.4 9.2 1.9 8.6 7.6 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) QueH PF02677.14 NODE_85185_length_187_cov_25.026316_g77244_i0reverse_frame_1 - 0.014 15.5 0.7 0.015 15.4 0.7 1.0 1 0 0 1 1 1 0 Epoxyqueuosine reductase QueH Wound_ind PF08186.11 NODE_85181_length_187_cov_26.717105_g77240_i0forward_frame_1 - 0.057 13.8 0.1 0.11 13.0 0.1 1.5 1 0 0 1 1 1 0 Wound-inducible basic protein family GPR15L PF15854.5 NODE_85176_length_187_cov_29.328947_g77235_i0reverse_frame_1 - 0.024 14.9 0.1 0.032 14.5 0.1 1.3 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 TAF1D PF15333.6 NODE_85172_length_187_cov_30.565789_g77231_i0reverse_frame_1 - 0.043 13.6 4.9 0.048 13.4 4.9 1.0 1 0 0 1 1 1 0 TATA box-binding protein-associated factor 1D 2TM PF13239.6 NODE_85171_length_187_cov_32.736842_g77230_i0forward_frame_1 - 3 8.2 6.4 4 7.8 6.4 1.3 1 0 0 1 1 1 0 2TM domain Nodulin_late PF07127.11 NODE_85154_length_187_cov_45.440789_g77213_i0forward_frame_1 - 0.089 13.1 0.5 0.11 12.9 0.5 1.2 1 0 0 1 1 1 0 Late nodulin protein UPF0060 PF02694.15 NODE_85145_length_187_cov_52.651316_g77204_i0reverse_frame_1 - 0.17 12.2 0.4 0.25 11.6 0.3 1.3 1 1 0 1 1 1 0 Uncharacterised BCR, YnfA/UPF0060 family Yippee-Mis18 PF03226.14 NODE_85139_length_187_cov_59.802632_g77198_i0reverse_frame_1 - 0.015 15.5 0.0 0.017 15.4 0.0 1.1 1 0 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Adeno_E3_CR2 PF02439.15 NODE_85136_length_187_cov_63.223684_g77195_i0forward_frame_1 - 0.058 13.2 0.5 0.058 13.2 0.5 2.1 1 1 1 2 2 2 0 Adenovirus E3 region protein CR2 DUF4801 PF16059.5 NODE_85121_length_187_cov_106.065789_g77180_i0reverse_frame_1 - 0.077 13.0 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) UPF0239 PF06783.11 NODE_85114_length_187_cov_163.434211_g77173_i0reverse_frame_1 - 0.022 14.9 1.0 0.025 14.7 1.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) GNAT_C PF18164.1 NODE_85113_length_187_cov_165.842105_g77172_i0reverse_frame_1 - 0.064 13.0 0.1 0.07 12.8 0.1 1.1 1 0 0 1 1 1 0 GNAT-like C-terminal domain Lig_chan PF00060.26 NODE_85107_length_187_cov_244.493421_g77166_i0forward_frame_1 - 0.88 9.4 4.2 0.23 11.3 0.5 1.6 1 1 1 2 2 2 0 Ligand-gated ion channel sCache_2 PF17200.4 NODE_85106_length_187_cov_268.855263_g77165_i0forward_frame_1 - 0.19 11.5 0.0 0.27 11.1 0.0 1.2 1 0 0 1 1 1 0 Single Cache domain 2 Nodulin_late PF07127.11 NODE_85103_length_187_cov_4463.368421_g77162_i0reverse_frame_1 - 0.2 12.1 0.5 0.25 11.7 0.5 1.2 1 0 0 1 1 1 0 Late nodulin protein Lamprin PF06403.11 NODE_85102_length_188_cov_0.732026_g77161_i0forward_frame_1 - 0.013 15.4 6.4 0.016 15.2 6.4 1.2 1 0 0 1 1 1 0 Lamprin Phage_holin_2_1 PF04971.12 NODE_85100_length_188_cov_0.784314_g77159_i0forward_frame_1 - 0.085 12.9 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage P21 holin S Fer4_3 PF12798.7 NODE_85091_length_188_cov_0.941176_g77150_i0forward_frame_1 - 0.23 12.5 1.1 0.23 12.5 1.1 3.1 3 1 0 3 3 3 0 4Fe-4S binding domain FadA PF09403.10 NODE_85089_length_188_cov_0.947712_g77148_i0reverse_frame_1 - 0.027 15.0 4.1 0.031 14.7 4.1 1.0 1 0 0 1 1 1 0 Adhesion protein FadA AT_hook PF02178.19 NODE_85086_length_188_cov_0.960784_g77145_i0forward_frame_1 - 0.0071 16.1 0.7 0.0071 16.1 0.7 3.3 3 1 0 2 2 2 1 AT hook motif DUF438 PF04282.13 NODE_85085_length_188_cov_0.973856_g77144_i0forward_frame_1 - 0.063 13.2 0.3 0.08 12.9 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF438) Ephrin_rec_like PF07699.13 NODE_85084_length_188_cov_0.993464_g77143_i0reverse_frame_1 - 8.9e-07 28.6 18.5 1.3e-05 24.9 5.9 2.4 1 1 1 2 2 2 2 Putative ephrin-receptor like NCD3G PF07562.14 NODE_85084_length_188_cov_0.993464_g77143_i0reverse_frame_1 - 7.8e-05 22.6 13.6 0.031 14.2 4.6 2.1 2 0 0 2 2 2 2 Nine Cysteines Domain of family 3 GPCR Opy2 PF09463.10 NODE_85084_length_188_cov_0.993464_g77143_i0reverse_frame_1 - 0.18 12.2 20.6 1.2 9.5 6.9 2.3 2 1 0 2 2 2 0 Opy2 protein DUF2180 PF09947.9 NODE_85084_length_188_cov_0.993464_g77143_i0reverse_frame_1 - 2 8.5 7.8 0.5 10.4 1.7 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2180) Sp38 PF07354.12 NODE_85084_length_188_cov_0.993464_g77143_i0reverse_frame_1 - 3.3 7.1 17.2 0.56 9.6 3.4 2.0 1 1 1 2 2 2 0 Zona-pellucida-binding protein (Sp38) DUF2039 PF10217.9 NODE_85084_length_188_cov_0.993464_g77143_i0reverse_frame_1 - 6.4 7.2 10.8 5 7.5 1.4 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2039) DUF4713 PF15831.5 NODE_85083_length_188_cov_1.000000_g77142_i0forward_frame_1 - 0.23 11.9 4.7 0.31 11.5 4.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) DUF5032 PF16435.5 NODE_85078_length_188_cov_1.006536_g77137_i0reverse_frame_1 - 0.079 12.4 0.1 0.09 12.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5032) zf-Di19 PF05605.12 NODE_85074_length_188_cov_1.013072_g77133_i0reverse_frame_1 - 0.0093 16.2 0.3 0.012 15.9 0.3 1.2 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding DUF4428 PF14471.6 NODE_85074_length_188_cov_1.013072_g77133_i0reverse_frame_1 - 0.016 15.1 0.1 0.019 14.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) Head-tail_con PF12236.8 NODE_85074_length_188_cov_1.013072_g77133_i0forward_frame_1 - 0.19 10.2 0.0 0.21 10.0 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage head to tail connecting protein HTH_32 PF13565.6 NODE_85072_length_188_cov_1.019608_g77131_i0reverse_frame_1 - 0.0013 19.3 0.1 0.0013 19.3 0.1 1.1 1 0 0 1 1 1 1 Homeodomain-like domain Mso1_C PF14477.6 NODE_85070_length_188_cov_1.026144_g77129_i0reverse_frame_1 - 0.11 12.9 0.3 0.11 12.9 0.3 2.2 2 0 0 2 2 2 0 Membrane-polarising domain of Mso1 OGG_N PF07934.12 NODE_85069_length_188_cov_1.032680_g77128_i0forward_frame_1 - 0.094 12.8 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain Defensin_1 PF00323.19 NODE_85062_length_188_cov_1.039216_g77121_i0forward_frame_1 - 0.047 14.3 4.7 0.088 13.4 4.7 1.5 1 0 0 1 1 1 0 Mammalian defensin DUF5541 PF17695.1 NODE_85052_length_188_cov_1.039216_g77111_i0forward_frame_1 - 0.13 12.7 0.5 0.14 12.6 0.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5541) HNH_2 PF13391.6 NODE_85045_length_188_cov_1.039216_g77104_i0forward_frame_1 - 0.15 12.2 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 HNH endonuclease RNA_pol_N PF01194.17 NODE_85038_length_188_cov_1.045752_g77097_i0reverse_frame_1 - 0.17 12.2 2.2 0.64 10.4 0.1 2.1 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit Ribonuc_red_lgC PF02867.15 NODE_85037_length_188_cov_1.045752_g77096_i0reverse_frame_1 - 6.3e-06 25.0 0.0 6.5e-06 25.0 0.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Herpes_UL25 PF01499.16 NODE_85037_length_188_cov_1.045752_g77096_i0reverse_frame_1 - 0.0089 14.6 0.0 0.0093 14.5 0.0 1.0 1 0 0 1 1 1 1 Herpesvirus UL25 family DUF3139 PF11337.8 NODE_85037_length_188_cov_1.045752_g77096_i0reverse_frame_1 - 0.092 13.4 0.1 0.098 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) Snf7 PF03357.21 NODE_85023_length_188_cov_1.045752_g77082_i0reverse_frame_1 - 0.099 12.2 7.2 0.11 12.0 7.2 1.0 1 0 0 1 1 1 0 Snf7 Swm2 PF17083.5 NODE_85018_length_188_cov_1.045752_g77077_i0forward_frame_1 - 0.13 12.3 0.3 0.14 12.1 0.3 1.1 1 0 0 1 1 1 0 Nucleolar protein Swm2 7TM_GPCR_Srw PF10324.9 NODE_85005_length_188_cov_1.045752_g77064_i0forward_frame_1 - 0.015 14.6 0.6 0.015 14.6 0.6 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srw DUF2418 PF10332.9 NODE_85000_length_188_cov_1.045752_g77059_i0reverse_frame_1 - 0.18 12.3 0.7 0.26 11.9 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) Ycf1 PF05758.12 NODE_84994_length_188_cov_1.045752_g77053_i0reverse_frame_1 - 0.45 8.3 5.7 0.5 8.2 5.7 1.0 1 0 0 1 1 1 0 Ycf1 ArsA_HSP20 PF17886.1 NODE_84984_length_188_cov_1.045752_g77043_i0forward_frame_1 - 0.082 12.5 0.0 0.085 12.4 0.0 1.1 1 0 0 1 1 1 0 HSP20-like domain found in ArsA DUF4672 PF15716.5 NODE_84979_length_188_cov_1.045752_g77038_i0reverse_frame_1 - 1.8 8.1 4.7 2 8.0 4.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) Pox_A32 PF04665.12 NODE_84979_length_188_cov_1.045752_g77038_i0forward_frame_1 - 0.0068 15.9 0.2 0.0073 15.8 0.2 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein KH_9 PF17904.1 NODE_84979_length_188_cov_1.045752_g77038_i0forward_frame_1 - 0.049 14.0 0.1 0.095 13.1 0.1 1.4 1 1 0 1 1 1 0 FMRP KH0 domain HEPN PF05168.14 NODE_84979_length_188_cov_1.045752_g77038_i0forward_frame_1 - 0.067 13.3 0.1 0.076 13.2 0.1 1.2 1 0 0 1 1 1 0 HEPN domain DUF3915 PF13054.6 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_1 - 0.036 14.1 0.5 0.036 14.0 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) PAP2_3 PF14378.6 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_1 - 0.089 12.5 0.0 0.089 12.5 0.0 1.0 1 0 0 1 1 1 0 PAP2 superfamily DUF4821 PF16092.5 NODE_84965_length_188_cov_1.098039_g77024_i0reverse_frame_1 - 0.038 13.6 3.0 0.041 13.5 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4821) TP2 PF01254.18 NODE_84963_length_188_cov_1.111111_g77022_i0reverse_frame_1 - 5.5 7.6 11.9 6 7.5 11.9 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 Vac7 PF12751.7 NODE_84958_length_188_cov_1.124183_g77017_i0forward_frame_1 - 0.72 9.2 1.5 0.8 9.1 1.5 1.0 1 0 0 1 1 1 0 Vacuolar segregation subunit 7 WD40_alt PF14077.6 NODE_84946_length_188_cov_1.176471_g77005_i0forward_frame_1 - 0.13 12.2 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 Alternative WD40 repeat motif Sec66 PF09802.9 NODE_84940_length_188_cov_1.196078_g76999_i0reverse_frame_1 - 0.011 15.4 0.1 0.012 15.2 0.1 1.0 1 0 0 1 1 1 0 Preprotein translocase subunit Sec66 Translat_reg PF01818.17 NODE_84937_length_188_cov_1.202614_g76996_i0reverse_frame_1 - 0.16 12.0 0.0 0.17 11.9 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage translational regulator YqzE PF14038.6 NODE_84935_length_188_cov_1.209150_g76994_i0reverse_frame_1 - 0.094 12.7 0.1 0.19 11.8 0.1 1.5 1 0 0 1 1 1 0 YqzE-like protein zf-nanos PF05741.13 NODE_84933_length_188_cov_1.215686_g76992_i0reverse_frame_1 - 0.1 12.9 2.0 0.72 10.1 1.0 2.0 1 1 1 2 2 2 0 Nanos RNA binding domain Uma2 PF05685.12 NODE_84932_length_188_cov_1.215686_g76991_i0forward_frame_1 - 0.18 11.4 0.0 0.2 11.2 0.0 1.0 1 0 0 1 1 1 0 Putative restriction endonuclease PAS_4 PF08448.10 NODE_84921_length_188_cov_1.235294_g76980_i0reverse_frame_1 - 0.067 13.4 0.0 0.11 12.8 0.0 1.3 1 1 0 1 1 1 0 PAS fold PAS PF00989.25 NODE_84921_length_188_cov_1.235294_g76980_i0reverse_frame_1 - 0.14 12.2 0.0 0.14 12.2 0.0 1.2 1 1 0 1 1 1 0 PAS fold MLTR_LBD PF17765.1 NODE_84921_length_188_cov_1.235294_g76980_i0reverse_frame_1 - 0.19 11.8 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 MmyB-like transcription regulator ligand binding domain Auto_anti-p27 PF06677.12 NODE_84913_length_188_cov_1.281046_g76972_i0forward_frame_1 - 0.022 14.9 0.9 0.035 14.3 0.9 1.3 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) SPACA9 PF15120.6 NODE_84904_length_188_cov_1.300654_g76963_i0forward_frame_1 - 0.18 11.6 0.0 0.2 11.4 0.0 1.0 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 Smim3 PF17307.2 NODE_84895_length_188_cov_1.307190_g76954_i0reverse_frame_1 - 0.0083 15.6 0.9 0.013 15.0 0.9 1.3 1 1 0 1 1 1 1 Small integral membrane protein 3 RSN1_7TM PF02714.15 NODE_84890_length_188_cov_1.307190_g76949_i0reverse_frame_1 - 0.0012 18.2 0.5 0.0013 18.1 0.5 1.0 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate DUF2427 PF10348.9 NODE_84890_length_188_cov_1.307190_g76949_i0reverse_frame_1 - 0.057 13.2 0.1 0.065 13.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2427) CutA1 PF03091.15 NODE_84874_length_188_cov_1.405229_g76933_i0reverse_frame_1 - 0.08 12.8 1.2 0.083 12.8 1.2 1.0 1 0 0 1 1 1 0 CutA1 divalent ion tolerance protein Mating_N PF12731.7 NODE_84873_length_188_cov_1.405229_g76932_i0reverse_frame_1 - 0.05 13.7 0.1 0.05 13.7 0.1 1.2 1 0 0 1 1 1 0 Mating-type protein beta 1 AI-2E_transport PF01594.16 NODE_84873_length_188_cov_1.405229_g76932_i0reverse_frame_1 - 0.068 12.3 0.4 0.068 12.3 0.4 1.0 1 0 0 1 1 1 0 AI-2E family transporter HTH_Crp_2 PF13545.6 NODE_84873_length_188_cov_1.405229_g76932_i0forward_frame_1 - 0.022 14.8 0.0 0.022 14.7 0.0 1.2 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain GDPD PF03009.17 NODE_84858_length_188_cov_1.496732_g76917_i0forward_frame_1 - 7.7e-12 45.5 0.0 8.7e-12 45.3 0.0 1.1 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family PI-PLC-X PF00388.19 NODE_84858_length_188_cov_1.496732_g76917_i0forward_frame_1 - 0.034 13.7 0.0 0.035 13.7 0.0 1.1 1 0 0 1 1 1 0 Phosphatidylinositol-specific phospholipase C, X domain DUF261 PF03196.13 NODE_84857_length_188_cov_1.509804_g76916_i0forward_frame_1 - 0.28 11.3 4.7 0.3 11.2 4.7 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF261 RVT_2 PF07727.14 NODE_84845_length_188_cov_1.535948_g76904_i0forward_frame_1 - 8.1e-05 22.4 0.0 8.1e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) PRIMA1 PF16101.5 NODE_84844_length_188_cov_1.542484_g76903_i0reverse_frame_1 - 0.05 13.6 1.4 0.058 13.4 1.4 1.0 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 T3SS_TC PF06511.11 NODE_84834_length_188_cov_1.555556_g76893_i0forward_frame_1 - 0.013 15.0 0.0 0.013 14.9 0.0 1.0 1 0 0 1 1 1 0 Type III secretion systems tip complex components E1-E2_ATPase PF00122.20 NODE_84829_length_188_cov_1.562092_g76888_i0reverse_frame_1 - 6.6e-07 29.0 0.1 6.7e-07 29.0 0.1 1.0 1 0 0 1 1 1 1 E1-E2 ATPase TLC PF03219.14 NODE_84829_length_188_cov_1.562092_g76888_i0forward_frame_1 - 0.035 12.8 0.1 0.04 12.6 0.1 1.0 1 0 0 1 1 1 0 TLC ATP/ADP transporter Glft2_N PF17994.1 NODE_84827_length_188_cov_1.562092_g76886_i0reverse_frame_1 - 0.13 12.2 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Galactofuranosyltransferase 2 N-terminal DUF179 PF02622.15 NODE_84819_length_188_cov_1.568627_g76878_i0forward_frame_1 - 4.9e-10 39.6 0.0 5.4e-10 39.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 Fer4_3 PF12798.7 NODE_84806_length_188_cov_1.568627_g76865_i0forward_frame_1 - 2 9.6 9.9 2.2 9.4 0.9 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain DUF3617 PF12276.8 NODE_84804_length_188_cov_1.581699_g76863_i0reverse_frame_1 - 0.014 15.7 0.7 0.015 15.6 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3617) Papilloma_E5A PF05776.12 NODE_84804_length_188_cov_1.581699_g76863_i0forward_frame_1 - 0.38 11.1 7.7 0.59 10.5 7.7 1.4 1 1 0 1 1 1 0 Papillomavirus E5A protein ADH_zinc_N PF00107.26 NODE_84800_length_188_cov_1.601307_g76859_i0forward_frame_1 - 0.0058 16.6 0.1 0.006 16.6 0.1 1.0 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADAM_CR PF08516.12 NODE_84793_length_188_cov_1.666667_g76852_i0forward_frame_1 - 0.04 14.3 1.3 0.047 14.1 1.3 1.2 1 0 0 1 1 1 0 ADAM cysteine-rich DUF4672 PF15716.5 NODE_84784_length_188_cov_1.718954_g76843_i0forward_frame_1 - 0.04 13.5 0.6 0.046 13.3 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) DUF4013 PF13197.6 NODE_84778_length_188_cov_1.751634_g76837_i0forward_frame_1 - 0.0022 17.9 0.4 0.0022 17.9 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4013) TMEM43 PF07787.12 NODE_84778_length_188_cov_1.751634_g76837_i0forward_frame_1 - 0.25 10.7 0.8 0.29 10.5 0.8 1.1 1 0 0 1 1 1 0 Transmembrane protein 43 MipA PF06629.12 NODE_84773_length_188_cov_1.777778_g76832_i0forward_frame_1 - 0.038 14.3 0.0 0.043 14.1 0.0 1.1 1 0 0 1 1 1 0 MltA-interacting protein MipA DUF446 PF04287.12 NODE_84769_length_188_cov_1.790850_g76828_i0reverse_frame_1 - 0.083 13.0 0.1 0.099 12.7 0.1 1.1 1 0 0 1 1 1 0 tRNA pseudouridine synthase C Catalase PF00199.19 NODE_84765_length_188_cov_1.810458_g76824_i0reverse_frame_1 - 4.6e-26 91.8 0.3 5.2e-26 91.7 0.3 1.0 1 0 0 1 1 1 1 Catalase Macoilin PF09726.9 NODE_84765_length_188_cov_1.810458_g76824_i0forward_frame_1 - 0.011 14.3 0.0 0.012 14.2 0.0 1.0 1 0 0 1 1 1 0 Macoilin family DUF3808 PF10300.9 NODE_84759_length_188_cov_1.823529_g76818_i0reverse_frame_1 - 0.054 12.2 0.0 0.054 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3808) DUF2726 PF10881.8 NODE_84758_length_188_cov_1.823529_g76817_i0reverse_frame_1 - 0.025 14.5 0.0 0.029 14.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2726) Fer4_12 PF13353.6 NODE_84754_length_188_cov_1.830065_g76813_i0forward_frame_1 - 0.27 11.5 3.9 0.21 11.9 3.3 1.3 1 1 0 1 1 1 0 4Fe-4S single cluster domain HET-S PF17108.5 NODE_84753_length_188_cov_1.843137_g76812_i0reverse_frame_1 - 0.15 11.8 0.1 0.32 10.8 0.1 1.5 1 0 0 1 1 1 0 N-terminal small S protein of HET, non-prionic CCDC-167 PF15188.6 NODE_84744_length_188_cov_1.954248_g76803_i0reverse_frame_1 - 0.00075 19.8 1.3 0.001 19.4 1.3 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 167 Ac110_PIF PF07280.11 NODE_84737_length_188_cov_1.980392_g76796_i0reverse_frame_1 - 0.097 12.5 0.7 0.14 12.0 0.7 1.2 1 0 0 1 1 1 0 Per os infectivity factor AC110 DUF2182 PF09948.9 NODE_84737_length_188_cov_1.980392_g76796_i0forward_frame_1 - 0.17 11.8 2.3 0.18 11.6 2.3 1.0 1 0 0 1 1 1 0 Predicted metal-binding integral membrane protein (DUF2182) Ephrin_rec_like PF07699.13 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 2.4e-08 33.6 16.2 1.7e-06 27.7 3.2 2.4 1 1 1 2 2 2 2 Putative ephrin-receptor like NCD3G PF07562.14 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 9.6e-06 25.5 12.9 0.0046 16.9 3.4 2.1 2 0 0 2 2 2 2 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 0.018 15.4 13.1 0.6 10.6 0.7 3.6 1 1 3 4 4 4 0 TNFR/NGFR cysteine-rich region Opy2 PF09463.10 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 0.023 15.0 17.9 0.18 12.2 4.8 2.9 1 1 2 3 3 3 0 Opy2 protein VSP PF03302.13 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 0.025 13.4 13.4 0.027 13.3 13.4 1.0 1 0 0 1 1 1 0 Giardia variant-specific surface protein DUF4215 PF13948.6 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 0.026 14.9 9.8 0.035 14.6 7.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4215) Laminin_EGF PF00053.24 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 0.033 14.3 13.0 0.44 10.7 3.7 3.1 1 1 1 2 2 2 0 Laminin EGF domain Herpes_TAF50 PF03326.13 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 0.19 10.4 0.5 0.19 10.4 0.5 1.0 1 0 0 1 1 1 0 Herpesvirus transcription activation factor (transactivator) zf-C2H2_jaz PF12171.8 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 0.82 10.0 6.6 5.9 7.3 0.1 3.7 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding zinc-ribbons_6 PF07191.12 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 1.8 8.6 9.6 15 5.7 9.6 2.0 1 1 0 1 1 1 0 zinc-ribbons HypA PF01155.19 NODE_84735_length_188_cov_2.000000_g76794_i0reverse_frame_1 - 6.1 6.9 10.9 4.8 7.2 2.3 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3479 PF11965.8 NODE_84732_length_188_cov_2.032680_g76791_i0forward_frame_1 - 0.12 12.5 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3479) DUF5560 PF17715.1 NODE_84731_length_188_cov_2.032680_g76790_i0forward_frame_1 - 0.11 12.0 0.0 0.12 11.8 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5560) DUF4708 PF15813.5 NODE_84730_length_188_cov_2.058824_g76789_i0forward_frame_1 - 0.083 12.0 0.3 0.089 11.9 0.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4708) Prokineticin PF06607.11 NODE_84729_length_188_cov_2.065359_g76788_i0reverse_frame_1 - 0.0087 16.4 0.0 0.0095 16.2 0.0 1.1 1 0 0 1 1 1 1 Prokineticin DUF1824 PF08854.10 NODE_84717_length_188_cov_2.183007_g76776_i0forward_frame_1 - 0.063 13.2 0.0 0.067 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1824) C1_2 PF03107.16 NODE_84713_length_188_cov_2.202614_g76772_i0forward_frame_1 - 0.0035 17.6 0.3 0.0043 17.3 0.3 1.2 1 0 0 1 1 1 1 C1 domain Cytokin_check_N PF10407.9 NODE_84712_length_188_cov_2.202614_g76771_i0reverse_frame_1 - 0.038 13.9 0.1 0.047 13.6 0.1 1.1 1 0 0 1 1 1 0 Cdc14 phosphatase binding protein N-terminus Keratin_2_head PF16208.5 NODE_84709_length_188_cov_2.281046_g76768_i0reverse_frame_1 - 0.15 12.2 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Keratin type II head Neurochondrin PF05536.11 NODE_84708_length_188_cov_2.320261_g76767_i0reverse_frame_1 - 0.11 10.8 0.1 0.12 10.8 0.1 1.1 1 0 0 1 1 1 0 Neurochondrin HbrB PF08539.11 NODE_84705_length_188_cov_2.339869_g76764_i0forward_frame_1 - 0.19 11.7 0.2 0.23 11.4 0.2 1.2 1 0 0 1 1 1 0 HbrB-like Glyco_hydro_19 PF00182.19 NODE_84696_length_188_cov_2.464052_g76755_i0reverse_frame_1 - 0.0046 16.9 0.0 0.0047 16.8 0.0 1.0 1 0 0 1 1 1 1 Chitinase class I DUF5579 PF17742.1 NODE_84693_length_188_cov_2.490196_g76752_i0reverse_frame_1 - 0.25 10.9 0.7 0.25 10.9 0.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5579) DUF1338 PF07063.13 NODE_84692_length_188_cov_2.496732_g76751_i0reverse_frame_1 - 1.2e-05 24.7 0.0 1.6e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1338) DUF4905 PF16248.5 NODE_84688_length_188_cov_2.549020_g76747_i0forward_frame_1 - 0.044 13.7 0.3 0.062 13.2 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4905) PLDc_2 PF13091.6 NODE_84681_length_188_cov_2.653595_g76740_i0forward_frame_1 - 0.0034 17.3 0.0 0.0035 17.2 0.0 1.1 1 0 0 1 1 1 1 PLD-like domain RecO_C PF02565.15 NODE_84681_length_188_cov_2.653595_g76740_i0forward_frame_1 - 0.17 11.7 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Recombination protein O C terminal ASFV_p27 PF06556.11 NODE_84680_length_188_cov_2.679739_g76739_i0forward_frame_1 - 0.015 15.4 0.2 0.017 15.2 0.2 1.1 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus FANCAA PF15146.6 NODE_84678_length_188_cov_2.751634_g76737_i0reverse_frame_1 - 0.091 11.8 0.7 0.11 11.6 0.7 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated NCD3G PF07562.14 NODE_84678_length_188_cov_2.751634_g76737_i0forward_frame_1 - 0.14 12.2 4.9 2.3 8.3 1.6 2.2 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR FlaG PF03646.15 NODE_84676_length_188_cov_2.849673_g76735_i0reverse_frame_1 - 0.17 12.1 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 FlaG protein OSR1_C PF12202.8 NODE_84673_length_188_cov_2.888889_g76732_i0forward_frame_1 - 0.026 14.8 0.0 0.032 14.5 0.0 1.1 1 0 0 1 1 1 0 Oxidative-stress-responsive kinase 1 C-terminal domain DUF3756 PF12581.8 NODE_84671_length_188_cov_2.967320_g76730_i0forward_frame_1 - 0.16 11.9 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3756) DUF3641 PF12345.8 NODE_84667_length_188_cov_3.071895_g76726_i0forward_frame_1 - 0.0098 15.9 0.5 0.0098 15.9 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3641) Pns11_12 PF17464.2 NODE_84664_length_188_cov_3.111111_g76723_i0forward_frame_1 - 0.18 11.5 0.7 0.16 11.7 0.7 1.1 1 0 0 1 1 1 0 Non-structural protein 11 and 12 Meleagrin PF08189.11 NODE_84660_length_188_cov_3.176471_g76719_i0forward_frame_1 - 0.0063 16.2 4.0 0.0093 15.6 1.1 2.0 2 0 0 2 2 2 1 Meleagrin/Cygnin family Cyt-b5 PF00173.28 NODE_84659_length_188_cov_3.183007_g76718_i0reverse_frame_1 - 8.9e-10 38.6 0.0 1e-09 38.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain ERGIC_N PF13850.6 NODE_84657_length_188_cov_3.320261_g76716_i0reverse_frame_1 - 0.069 13.5 0.6 0.085 13.2 0.6 1.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) WBP-1 PF11669.8 NODE_84656_length_188_cov_3.372549_g76715_i0forward_frame_1 - 0.033 14.8 0.0 0.036 14.7 0.0 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 Fibrinogen_aC PF12160.8 NODE_84655_length_188_cov_3.385621_g76714_i0reverse_frame_1 - 0.85 9.5 6.6 2.3 8.1 6.6 1.7 1 1 0 1 1 1 0 Fibrinogen alpha C domain DUF1314 PF07013.11 NODE_84652_length_188_cov_3.784314_g76711_i0forward_frame_1 - 0.14 12.0 0.0 0.16 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1314) Pro_dh-DNA_bdg PF14850.6 NODE_84649_length_188_cov_4.444444_g76708_i0forward_frame_1 - 0.13 12.8 0.0 0.17 12.4 0.0 1.2 1 0 0 1 1 1 0 DNA-binding domain of Proline dehydrogenase PP-binding PF00550.25 NODE_84645_length_188_cov_13.026144_g76704_i0reverse_frame_1 - 1.4e-05 25.4 0.2 1.9e-05 24.9 0.2 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site DUF1908 PF08926.11 NODE_84645_length_188_cov_13.026144_g76704_i0forward_frame_1 - 0.0089 15.1 1.5 0.009 15.1 1.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1908) Cytochrom_D1 PF02239.16 NODE_84641_length_188_cov_14.215686_g76700_i0forward_frame_1 - 0.15 10.6 0.0 0.17 10.4 0.0 1.0 1 0 0 1 1 1 0 Cytochrome D1 heme domain DUF2229 PF09989.9 NODE_84628_length_188_cov_29.339869_g76687_i0reverse_frame_1 - 8.6 5.9 11.5 9.4 5.8 11.5 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) Lustrin_cystein PF14625.6 NODE_84628_length_188_cov_29.339869_g76687_i0forward_frame_1 - 5.2 7.5 12.6 4.3 7.8 6.2 2.6 2 1 0 2 2 2 0 Lustrin, cysteine-rich repeated domain Tim54 PF11711.8 NODE_84623_length_188_cov_34.222222_g76682_i0reverse_frame_1 - 0.032 13.0 1.0 0.034 12.9 1.0 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF2417 PF10329.9 NODE_84622_length_188_cov_34.738562_g76681_i0forward_frame_1 - 2.4 7.5 5.7 2.9 7.3 5.7 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) PTPA PF03095.15 NODE_84619_length_188_cov_35.392157_g76678_i0reverse_frame_1 - 0.033 13.6 0.0 0.034 13.6 0.0 1.0 1 0 0 1 1 1 0 Phosphotyrosyl phosphate activator (PTPA) protein Laminin_I PF06008.14 NODE_84613_length_188_cov_39.888889_g76672_i0forward_frame_1 - 0.15 11.8 0.0 0.16 11.6 0.0 1.0 1 0 0 1 1 1 0 Laminin Domain I Herpes_UL3 PF03369.13 NODE_84607_length_188_cov_42.771242_g76666_i0reverse_frame_1 - 0.044 14.3 0.8 0.046 14.3 0.8 1.0 1 0 0 1 1 1 0 Herpesvirus UL3 protein DUF5463 PF17551.2 NODE_84605_length_188_cov_43.947712_g76664_i0reverse_frame_1 - 0.061 13.2 0.1 0.11 12.4 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5463) PDR_CDR PF06422.12 NODE_84605_length_188_cov_43.947712_g76664_i0forward_frame_1 - 0.19 11.7 0.3 0.22 11.5 0.3 1.1 1 0 0 1 1 1 0 CDR ABC transporter UBA PF00627.31 NODE_84604_length_188_cov_44.882353_g76663_i0forward_frame_1 - 0.02 14.8 0.0 0.094 12.6 0.0 1.9 2 0 0 2 2 2 0 UBA/TS-N domain SPACA9 PF15120.6 NODE_84600_length_188_cov_51.228758_g76659_i0reverse_frame_1 - 0.013 15.3 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 Sperm acrosome-associated protein 9 PRP38_assoc PF12871.7 NODE_84598_length_188_cov_55.189542_g76657_i0forward_frame_1 - 0.0057 17.2 25.4 0.0092 16.6 25.4 1.3 1 0 0 1 1 1 1 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Spt5_N PF11942.8 NODE_84598_length_188_cov_55.189542_g76657_i0forward_frame_1 - 0.048 14.7 8.0 0.052 14.5 8.0 1.0 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal Corona_nucleoca PF00937.18 NODE_84598_length_188_cov_55.189542_g76657_i0forward_frame_1 - 0.75 8.8 7.6 0.85 8.6 7.6 1.2 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein DUF1509 PF07420.11 NODE_84598_length_188_cov_55.189542_g76657_i0forward_frame_1 - 1 8.2 14.0 1.3 7.9 14.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks431.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks431.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks431.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks431.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_M56 PF05569.11 NODE_84585_length_188_cov_71.039216_g76644_i0forward_frame_1 - 0.17 11.0 0.0 0.2 10.8 0.0 1.0 1 0 0 1 1 1 0 BlaR1 peptidase M56 NAD_binding_7 PF13241.6 NODE_84583_length_188_cov_72.137255_g76642_i0reverse_frame_1 - 0.075 13.5 0.0 0.088 13.3 0.0 1.1 1 0 0 1 1 1 0 Putative NAD(P)-binding ParA PF10609.9 NODE_84583_length_188_cov_72.137255_g76642_i0reverse_frame_1 - 0.11 11.9 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Nramp PF01566.18 NODE_84574_length_188_cov_99.045752_g76633_i0forward_frame_1 - 0.028 13.4 0.6 0.029 13.3 0.6 1.1 1 0 0 1 1 1 0 Natural resistance-associated macrophage protein DUF4401 PF14351.6 NODE_84573_length_188_cov_99.405229_g76632_i0reverse_frame_1 - 2.1 7.5 4.0 0.89 8.8 0.9 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4401) Cnd1_N PF12922.7 NODE_84570_length_188_cov_106.967320_g76629_i0reverse_frame_1 - 0.035 14.0 1.0 0.043 13.7 1.0 1.1 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term HicA_toxin PF07927.12 NODE_84563_length_188_cov_139.751634_g76622_i0reverse_frame_1 - 0.0059 16.6 0.3 0.008 16.2 0.3 1.1 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, Orf78 PF06024.12 NODE_84552_length_188_cov_309.784314_g76611_i0reverse_frame_1 - 0.091 13.1 0.2 0.091 13.1 0.2 1.1 1 0 0 1 1 1 0 Orf78 (ac78) DUF736 PF05284.12 NODE_84552_length_188_cov_309.784314_g76611_i0forward_frame_1 - 0.19 11.6 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF736) ABC_membrane PF00664.23 NODE_84549_length_188_cov_433.836601_g76608_i0forward_frame_1 - 1.2e-10 41.5 0.1 1.2e-10 41.5 0.1 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region UCR_6-4kD PF08997.10 NODE_84549_length_188_cov_433.836601_g76608_i0forward_frame_1 - 0.032 14.1 0.3 0.048 13.6 0.3 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase complex, 6.4kD protein AP3D1 PF06375.11 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_1 - 0.38 11.0 9.6 0.42 10.8 9.6 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF4131 PF13567.6 NODE_84548_length_188_cov_448.464052_g76607_i0forward_frame_1 - 0.025 14.3 6.7 0.03 14.0 6.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) ABC2_membrane_3 PF12698.7 NODE_84548_length_188_cov_448.464052_g76607_i0forward_frame_1 - 0.88 8.6 8.7 1 8.4 8.7 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Fer2 PF00111.27 NODE_84542_length_188_cov_17682.483660_g76601_i0forward_frame_1 - 2.5e-12 46.6 0.5 2.8e-12 46.4 0.5 1.1 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain CA_like PF10563.9 NODE_84541_length_188_cov_23325.143791_g76600_i0forward_frame_1 - 0.02 14.8 0.0 0.021 14.8 0.0 1.1 1 0 0 1 1 1 0 Putative carbonic anhydrase DUF5004 PF16395.5 NODE_84540_length_188_cov_59321.712418_g76599_i0reverse_frame_1 - 0.068 13.2 0.0 0.071 13.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5004) zf_PR_Knuckle PF18445.1 NODE_84539_length_188_cov_315117.019608_g76598_i0reverse_frame_1 - 0.074 12.9 0.5 5.3 6.9 0.0 2.3 2 0 0 2 2 2 0 PR zinc knuckle motif DUF2518 PF10726.9 NODE_84537_length_189_cov_0.766234_g76596_i0reverse_frame_1 - 0.079 12.6 0.0 0.088 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of function (DUF2518) PRIMA1 PF16101.5 NODE_84532_length_189_cov_0.896104_g76591_i0reverse_frame_1 - 0.12 12.4 4.3 0.13 12.3 4.3 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 zf-ANAPC11 PF12861.7 NODE_84518_length_189_cov_0.974026_g76577_i0reverse_frame_1 - 0.062 13.4 3.4 0.073 13.1 3.4 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger EPF PF17181.4 NODE_84518_length_189_cov_0.974026_g76577_i0forward_frame_1 - 0.044 13.8 0.2 0.056 13.4 0.2 1.1 1 0 0 1 1 1 0 Epidermal patterning factor proteins Kinesin PF00225.23 NODE_84512_length_189_cov_1.000000_g76571_i0forward_frame_1 - 0.00026 20.0 0.0 0.00026 20.0 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain DUF5357 PF17310.2 NODE_84502_length_189_cov_1.025974_g76561_i0reverse_frame_1 - 0.053 12.1 1.2 0.058 11.9 1.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) DUF902 PF06001.13 NODE_84500_length_189_cov_1.025974_g76559_i0forward_frame_1 - 0.018 15.5 0.1 0.03 14.8 0.1 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF902) SeqA PF03925.13 NODE_84490_length_189_cov_1.032468_g76549_i0reverse_frame_1 - 0.013 15.4 0.0 0.013 15.4 0.0 1.2 1 0 0 1 1 1 0 SeqA protein C-terminal domain Gamma-thionin PF00304.20 NODE_84483_length_189_cov_1.032468_g76542_i0reverse_frame_1 - 0.0011 19.2 4.2 0.0011 19.2 4.2 2.0 1 1 1 2 2 2 1 Gamma-thionin family SDH_alpha PF03313.15 NODE_84482_length_189_cov_1.032468_g76541_i0forward_frame_1 - 0.011 15.4 0.0 0.012 15.3 0.0 1.0 1 0 0 1 1 1 0 Serine dehydratase alpha chain DUF3817 PF12823.7 NODE_84481_length_189_cov_1.032468_g76540_i0reverse_frame_1 - 0.043 14.6 0.5 0.045 14.6 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3817) SRP54 PF00448.22 NODE_84474_length_189_cov_1.032468_g76533_i0reverse_frame_1 - 0.1 12.2 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NRN1 PF15056.6 NODE_84470_length_189_cov_1.038961_g76529_i0reverse_frame_1 - 0.067 13.3 0.3 0.087 12.9 0.2 1.3 1 1 0 1 1 1 0 Neuritin protein family Shal-type PF11601.8 NODE_84466_length_189_cov_1.038961_g76525_i0forward_frame_1 - 0.084 12.4 1.5 0.52 9.9 0.1 2.4 3 0 0 3 3 3 0 Shal-type voltage-gated potassium channels, N-terminal DUF2484 PF10658.9 NODE_84458_length_189_cov_1.038961_g76517_i0forward_frame_1 - 0.0085 16.4 0.0 0.011 16.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2484) PHD PF00628.29 NODE_84457_length_189_cov_1.038961_g76516_i0reverse_frame_1 - 0.042 13.7 8.8 0.088 12.7 8.8 1.7 1 1 0 1 1 1 0 PHD-finger RVT_2 PF07727.14 NODE_84450_length_189_cov_1.038961_g76509_i0forward_frame_1 - 0.001 18.8 0.0 0.0011 18.7 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF2530 PF10745.9 NODE_84446_length_189_cov_1.038961_g76505_i0reverse_frame_1 - 0.0032 17.7 0.0 0.0041 17.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2530) Myosin_head PF00063.21 NODE_84442_length_189_cov_1.038961_g76501_i0reverse_frame_1 - 1.4e-05 23.5 0.0 1.6e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) zf-nanos PF05741.13 NODE_84442_length_189_cov_1.038961_g76501_i0forward_frame_1 - 0.054 13.7 0.3 0.064 13.5 0.3 1.2 1 0 0 1 1 1 0 Nanos RNA binding domain Dynactin_p62 PF05502.13 NODE_84439_length_189_cov_1.038961_g76498_i0forward_frame_1 - 1.1 7.9 3.0 1.3 7.7 3.0 1.0 1 0 0 1 1 1 0 Dynactin p62 family DUF3302 PF11742.8 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.0035 17.4 0.2 0.0043 17.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3302) AA_permease_2 PF13520.6 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.014 14.2 0.1 0.015 14.1 0.1 1.0 1 0 0 1 1 1 0 Amino acid permease Baculo_11_kDa PF06143.11 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.02 14.4 0.3 0.025 14.1 0.3 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family DUF4834 PF16118.5 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.024 15.6 0.1 0.025 15.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.026 15.4 0.1 0.029 15.2 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain EMP70 PF02990.16 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.027 13.1 0.2 0.03 13.0 0.2 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 DUF4083 PF13314.6 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.046 13.7 0.4 0.059 13.3 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) ECSCR PF15820.5 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_1 - 0.11 12.4 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Mrr_cat PF04471.12 NODE_84434_length_189_cov_1.038961_g76493_i0reverse_frame_1 - 0.1 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease Lamprin PF06403.11 NODE_84429_length_189_cov_1.038961_g76488_i0forward_frame_1 - 0.0016 18.4 1.0 0.0017 18.3 1.0 1.2 1 0 0 1 1 1 1 Lamprin DUF5437 PF17505.2 NODE_84427_length_189_cov_1.038961_g76486_i0reverse_frame_1 - 0.061 13.4 0.5 1.1 9.3 0.0 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5437) RuvB_N PF05496.12 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 1.1e-06 28.5 0.0 1.2e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 1.1e-06 28.7 0.0 1.2e-06 28.6 0.0 1.0 1 0 0 1 1 1 1 Rad17 P-loop domain AAA PF00004.29 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 1.6e-05 25.4 0.5 3.5e-05 24.2 0.4 1.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF815 PF05673.13 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.00027 20.2 0.0 0.00027 20.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF815) ResIII PF04851.15 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.00041 20.4 0.0 0.00045 20.3 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit TIP49 PF06068.13 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.00067 19.0 0.0 0.00067 19.0 0.0 1.0 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_11 PF13086.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.00075 19.4 0.1 0.00086 19.2 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.0067 16.8 0.0 0.0078 16.6 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.0071 15.9 0.0 0.0085 15.6 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region RNA_helicase PF00910.22 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.0081 16.5 0.1 0.013 15.9 0.1 1.4 1 0 0 1 1 1 1 RNA helicase IstB_IS21 PF01695.17 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.021 14.6 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_30 PF13604.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.021 14.6 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.029 14.4 0.3 0.076 13.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Torsin PF06309.11 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.046 13.8 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Torsin Mg_chelatase PF01078.21 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.047 13.1 0.0 0.047 13.1 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI T2SSE PF00437.20 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.048 12.7 0.0 0.053 12.6 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein PIF1 PF05970.14 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.052 12.7 0.0 0.056 12.6 0.0 1.0 1 0 0 1 1 1 0 PIF1-like helicase AAA_24 PF13479.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.052 13.3 0.7 0.084 12.6 0.3 1.5 1 1 1 2 2 2 0 AAA domain TniB PF05621.11 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.055 12.9 0.0 0.059 12.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein AAA_19 PF13245.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.055 13.8 0.1 0.063 13.6 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.066 13.5 0.0 0.095 12.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain Kinesin PF00225.23 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.069 12.1 0.0 0.069 12.1 0.0 1.0 1 0 0 1 1 1 0 Kinesin motor domain AAA_22 PF13401.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.072 13.4 0.1 0.1 12.8 0.1 1.3 1 1 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.077 12.9 0.1 0.092 12.7 0.1 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DNA_pol3_delta2 PF13177.6 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.088 12.6 0.0 0.096 12.5 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III, delta subunit NB-ARC PF00931.22 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.11 11.7 0.0 0.13 11.4 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain PhoH PF02562.16 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.14 11.6 0.1 0.22 10.9 0.1 1.4 1 1 1 2 2 2 0 PhoH-like protein Bac_DnaA PF00308.18 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.15 11.9 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial dnaA protein FtsK_SpoIIIE PF01580.18 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.2 10.9 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family Hydin_ADK PF17213.3 NODE_84422_length_189_cov_1.038961_g76481_i0reverse_frame_1 - 0.21 11.8 0.2 0.29 11.4 0.2 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain Eclosion PF04736.12 NODE_84420_length_189_cov_1.038961_g76479_i0forward_frame_1 - 0.13 12.0 0.5 0.57 9.9 0.5 1.9 1 1 0 1 1 1 0 Eclosion hormone Molybdop_Fe4S4 PF04879.16 NODE_84414_length_189_cov_1.058442_g76473_i0forward_frame_1 - 0.018 15.0 0.9 0.024 14.6 0.9 1.3 1 1 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain RITA PF17066.5 NODE_84409_length_189_cov_1.103896_g76468_i0forward_frame_1 - 0.095 12.3 0.0 0.095 12.3 0.0 1.0 1 0 0 1 1 1 0 RBPJ-interacting and tubulin associated protein MTCP1 PF08991.10 NODE_84408_length_189_cov_1.110390_g76467_i0reverse_frame_1 - 0.026 14.7 4.5 0.031 14.5 0.3 2.0 1 1 0 2 2 2 0 Mature-T-Cell Proliferation I type DUF2719 PF10891.8 NODE_84405_length_189_cov_1.123377_g76464_i0forward_frame_1 - 0.0073 16.2 0.4 0.008 16.1 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2719) DUF5326 PF17260.2 NODE_84400_length_189_cov_1.136364_g76459_i0reverse_frame_1 - 0.085 13.0 2.0 0.11 12.7 2.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5326) zf-CW PF07496.15 NODE_84397_length_189_cov_1.142857_g76456_i0reverse_frame_1 - 0.26 11.3 6.9 0.48 10.5 6.9 1.4 1 0 0 1 1 1 0 CW-type Zinc Finger DUF5579 PF17742.1 NODE_84393_length_189_cov_1.149351_g76452_i0reverse_frame_1 - 0.0084 15.7 0.2 0.0095 15.5 0.2 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5579) Lentivirus_VIF PF05851.11 NODE_84393_length_189_cov_1.149351_g76452_i0reverse_frame_1 - 0.11 11.4 0.2 0.13 11.2 0.2 1.0 1 0 0 1 1 1 0 Lentivirus virion infectivity factor (VIF) DUF809 PF05663.11 NODE_84388_length_189_cov_1.181818_g76447_i0forward_frame_1 - 0.019 15.1 2.0 0.02 15.0 2.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) DUF3666 PF12408.8 NODE_84373_length_189_cov_1.220779_g76432_i0reverse_frame_1 - 0.0018 17.4 0.1 0.0023 17.1 0.1 1.2 1 0 0 1 1 1 1 Ribose-5-phosphate isomerase Sbt_1 PF05982.12 NODE_84371_length_189_cov_1.227273_g76430_i0reverse_frame_1 - 0.036 13.3 0.3 0.037 13.3 0.3 1.0 1 0 0 1 1 1 0 Na+-dependent bicarbonate transporter superfamily ATG16 PF08614.11 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.0056 16.9 5.6 0.0063 16.8 5.6 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) VASP_tetra PF08776.11 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.0072 15.9 0.4 0.012 15.1 0.4 1.3 1 0 0 1 1 1 1 VASP tetramerisation domain Nup54 PF13874.6 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.019 15.1 5.1 0.02 15.0 5.1 1.0 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 SlyX PF04102.12 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.11 13.1 3.9 0.13 12.9 3.9 1.1 1 0 0 1 1 1 0 SlyX DUF922 PF06037.11 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.13 12.1 3.9 0.14 11.9 3.9 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) CENP-H PF05837.12 NODE_84371_length_189_cov_1.227273_g76430_i0forward_frame_1 - 0.17 12.3 5.3 0.17 12.3 5.3 1.0 1 0 0 1 1 1 0 Centromere protein H (CENP-H) S_locus_glycop PF00954.20 NODE_84362_length_189_cov_1.272727_g76421_i0reverse_frame_1 - 0.011 16.3 0.3 0.012 16.1 0.3 1.1 1 0 0 1 1 1 0 S-locus glycoprotein domain DUF3304 PF11745.8 NODE_84362_length_189_cov_1.272727_g76421_i0forward_frame_1 - 0.16 12.4 0.2 0.16 12.4 0.2 1.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3304) bZIP_1 PF00170.21 NODE_84338_length_189_cov_1.298701_g76397_i0reverse_frame_1 - 0.012 15.7 0.8 0.015 15.3 0.8 1.2 1 0 0 1 1 1 0 bZIP transcription factor Vpu PF00558.19 NODE_84338_length_189_cov_1.298701_g76397_i0reverse_frame_1 - 0.082 12.7 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 Vpu protein NDUF_B7 PF05676.13 NODE_84332_length_189_cov_1.305195_g76391_i0forward_frame_1 - 0.026 14.2 0.4 0.039 13.7 0.3 1.4 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Defensin_big PF14862.6 NODE_84329_length_189_cov_1.344156_g76388_i0reverse_frame_1 - 5 7.5 8.1 7 7.1 8.1 1.5 1 1 0 1 1 1 0 Big defensin LapA_dom PF06305.11 NODE_84329_length_189_cov_1.344156_g76388_i0forward_frame_1 - 0.14 12.0 2.1 0.14 12.0 1.6 1.3 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain UCH_N PF16674.5 NODE_84328_length_189_cov_1.350649_g76387_i0reverse_frame_1 - 0.094 12.7 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 N-terminal of ubiquitin carboxyl-terminal hydrolase 37 DUF4481 PF14800.6 NODE_84326_length_189_cov_1.363636_g76385_i0forward_frame_1 - 0.014 14.9 1.0 0.017 14.7 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4481) GAT PF03127.14 NODE_84318_length_189_cov_1.402597_g76377_i0forward_frame_1 - 0.081 13.2 0.1 0.12 12.7 0.1 1.3 1 0 0 1 1 1 0 GAT domain LAB_N PF07578.11 NODE_84317_length_189_cov_1.422078_g76376_i0reverse_frame_1 - 0.034 14.2 0.0 0.034 14.2 0.0 1.2 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain EAL PF00563.20 NODE_84312_length_189_cov_1.441558_g76371_i0forward_frame_1 - 3.7e-14 52.8 0.0 4e-14 52.7 0.0 1.0 1 0 0 1 1 1 1 EAL domain Ion_trans PF00520.31 NODE_84307_length_189_cov_1.461039_g76366_i0reverse_frame_1 - 0.032 13.5 0.2 0.033 13.4 0.2 1.1 1 0 0 1 1 1 0 Ion transport protein DUF2964 PF11177.8 NODE_84304_length_189_cov_1.487013_g76363_i0reverse_frame_1 - 0.16 12.2 0.1 0.2 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2964) UreE_N PF02814.15 NODE_84303_length_189_cov_1.493506_g76362_i0reverse_frame_1 - 0.067 12.8 1.0 0.085 12.5 1.0 1.2 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain PRIMA1 PF16101.5 NODE_84303_length_189_cov_1.493506_g76362_i0forward_frame_1 - 0.064 13.3 3.5 0.066 13.2 3.5 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 CAP_N PF01213.19 NODE_84303_length_189_cov_1.493506_g76362_i0forward_frame_1 - 0.45 9.9 3.8 0.45 10.0 3.8 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Reo_P9 PF06043.11 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_1 - 1.3 8.3 9.4 1.5 8.2 9.4 1.0 1 0 0 1 1 1 0 Reovirus P9-like family THB PF18362.1 NODE_84287_length_189_cov_1.538961_g76346_i0reverse_frame_1 - 0.1 12.2 0.4 0.2 11.3 0.4 1.5 1 0 0 1 1 1 0 Tri-helix bundle domain SopA PF13981.6 NODE_84283_length_189_cov_1.551948_g76342_i0forward_frame_1 - 0.0046 17.4 0.1 0.0058 17.1 0.1 1.1 1 0 0 1 1 1 1 SopA-like central domain Germane PF10646.9 NODE_84283_length_189_cov_1.551948_g76342_i0forward_frame_1 - 0.06 14.1 0.1 0.064 14.0 0.1 1.1 1 0 0 1 1 1 0 Sporulation and spore germination RAD51_interact PF15696.5 NODE_84278_length_189_cov_1.551948_g76337_i0reverse_frame_1 - 0.015 15.4 0.1 0.033 14.3 0.0 1.6 2 0 0 2 2 2 0 RAD51 interacting motif Pardaxin PF07425.11 NODE_84277_length_189_cov_1.551948_g76336_i0reverse_frame_1 - 0.11 12.1 1.2 0.2 11.3 1.2 1.4 1 0 0 1 1 1 0 Pardaxin Hum_adeno_E3A PF05393.11 NODE_84276_length_189_cov_1.551948_g76335_i0forward_frame_1 - 0.061 13.3 0.1 0.063 13.3 0.1 1.1 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein Herpes_UL69 PF05459.12 NODE_84273_length_189_cov_1.551948_g76332_i0forward_frame_1 - 0.15 11.3 0.9 0.2 10.9 0.9 1.1 1 0 0 1 1 1 0 Herpesvirus transcriptional regulator family OB_NTP_bind PF07717.16 NODE_84269_length_189_cov_1.558442_g76328_i0forward_frame_1 - 2.1e-08 34.4 0.1 2.3e-08 34.3 0.1 1.0 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Copine PF07002.16 NODE_84258_length_189_cov_1.558442_g76317_i0forward_frame_1 - 7.4e-07 28.8 0.0 8e-07 28.7 0.0 1.0 1 0 0 1 1 1 1 Copine MinE PF03776.14 NODE_84252_length_189_cov_1.584416_g76311_i0reverse_frame_1 - 0.11 12.5 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Septum formation topological specificity factor MinE DUF4085 PF13315.6 NODE_84252_length_189_cov_1.584416_g76311_i0reverse_frame_1 - 0.12 12.0 0.1 0.13 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4085) DUF1948 PF09185.10 NODE_84251_length_189_cov_1.590909_g76310_i0forward_frame_1 - 0.088 12.7 0.1 0.088 12.7 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1948) SelK_SelG PF10961.8 NODE_84231_length_189_cov_1.688312_g76290_i0reverse_frame_1 - 1.3 9.7 4.2 1.6 9.4 4.2 1.2 1 0 0 1 1 1 0 Selenoprotein SelK_SelG OGG_N PF07934.12 NODE_84230_length_189_cov_1.694805_g76289_i0forward_frame_1 - 0.078 13.1 0.2 0.078 13.1 0.2 1.0 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain PAP2 PF01569.21 NODE_84212_length_189_cov_1.811688_g76271_i0reverse_frame_1 - 0.0009 19.0 0.0 0.00094 19.0 0.0 1.1 1 0 0 1 1 1 1 PAP2 superfamily AnkUBD PF18418.1 NODE_84203_length_189_cov_1.876623_g76262_i0forward_frame_1 - 0.19 11.9 0.0 0.24 11.6 0.0 1.2 1 0 0 1 1 1 0 Ankyrin ubiquitin-binding domain DUF4349 PF14257.6 NODE_84198_length_189_cov_1.909091_g76257_i0forward_frame_1 - 0.2 11.1 0.5 0.19 11.1 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Tissue_fac PF01108.17 NODE_84195_length_189_cov_1.915584_g76254_i0reverse_frame_1 - 0.036 13.9 0.4 0.036 13.9 0.4 1.0 1 0 0 1 1 1 0 Tissue factor COE1_DBD PF16422.5 NODE_84194_length_189_cov_1.922078_g76253_i0reverse_frame_1 - 0.16 11.4 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain AWS PF17907.1 NODE_84190_length_189_cov_1.948052_g76249_i0reverse_frame_1 - 0.022 14.8 0.9 0.024 14.7 0.2 1.4 1 1 0 1 1 1 0 AWS domain Dscam_C PF12355.8 NODE_84186_length_189_cov_1.974026_g76245_i0forward_frame_1 - 0.19 12.7 1.0 0.19 12.7 1.0 1.2 1 0 0 1 1 1 0 Down syndrome cell adhesion molecule C terminal DUF412 PF04217.13 NODE_84177_length_189_cov_2.058442_g76236_i0forward_frame_1 - 0.13 12.1 0.7 0.15 12.0 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF412 DER1 PF04511.15 NODE_84176_length_189_cov_2.058442_g76235_i0reverse_frame_1 - 1.8e-11 44.4 4.6 1.8e-11 44.3 4.6 1.0 1 0 0 1 1 1 1 Der1-like family RAD51_interact PF15696.5 NODE_84175_length_189_cov_2.064935_g76234_i0reverse_frame_1 - 0.11 12.7 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 RAD51 interacting motif XET_C PF06955.12 NODE_84175_length_189_cov_2.064935_g76234_i0reverse_frame_1 - 0.31 10.9 3.8 0.58 10.0 3.8 1.5 1 1 0 1 1 1 0 Xyloglucan endo-transglycosylase (XET) C-terminus Kinesin PF00225.23 NODE_84171_length_189_cov_2.071429_g76230_i0forward_frame_1 - 2.4e-15 56.3 0.0 2.5e-15 56.3 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_84171_length_189_cov_2.071429_g76230_i0forward_frame_1 - 4.3e-09 36.5 0.1 4.7e-09 36.4 0.1 1.3 1 1 0 1 1 1 1 Microtubule binding LURAP PF14854.6 NODE_84169_length_189_cov_2.071429_g76228_i0forward_frame_1 - 0.094 12.7 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Leucine rich adaptor protein DUF1479 PF07350.12 NODE_84168_length_189_cov_2.071429_g76227_i0reverse_frame_1 - 0.16 10.7 0.1 0.17 10.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) Ribosomal_L28 PF00830.19 NODE_84165_length_189_cov_2.071429_g76224_i0reverse_frame_1 - 0.091 13.0 0.2 0.098 12.9 0.2 1.1 1 0 0 1 1 1 0 Ribosomal L28 family zf_Hakai PF18408.1 NODE_84162_length_189_cov_2.077922_g76221_i0forward_frame_1 - 0.19 11.4 0.7 0.19 11.4 0.7 1.8 2 0 0 2 2 2 0 C2H2 Hakai zinc finger domain G-7-MTase PF12803.7 NODE_84152_length_189_cov_2.175325_g76211_i0forward_frame_1 - 0.065 12.4 0.1 0.072 12.2 0.1 1.1 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) zinc_ribbon_12 PF11331.8 NODE_84152_length_189_cov_2.175325_g76211_i0forward_frame_1 - 0.78 9.6 0.2 0.78 9.6 0.2 2.7 2 1 1 3 3 3 0 Probable zinc-ribbon domain WYL_2 PF10902.8 NODE_84147_length_189_cov_2.207792_g76206_i0reverse_frame_1 - 0.0057 17.0 0.1 0.0074 16.6 0.1 1.2 1 0 0 1 1 1 1 WYL_2, Sm-like SH3 beta-barrel fold DUF4477 PF14780.6 NODE_84132_length_189_cov_2.324675_g76191_i0reverse_frame_1 - 0.18 11.4 3.8 0.19 11.3 3.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) Herpes_UL6 PF01763.16 NODE_84132_length_189_cov_2.324675_g76191_i0forward_frame_1 - 0.028 12.9 0.3 0.03 12.9 0.3 1.0 1 0 0 1 1 1 0 Herpesvirus UL6 like Phage_connect_1 PF05135.13 NODE_84132_length_189_cov_2.324675_g76191_i0forward_frame_1 - 0.03 14.8 0.7 0.032 14.7 0.7 1.1 1 0 0 1 1 1 0 Phage gp6-like head-tail connector protein zf-RVT PF13966.6 NODE_84131_length_189_cov_2.331169_g76190_i0forward_frame_1 - 0.0011 19.7 0.1 0.0012 19.5 0.1 1.1 1 0 0 1 1 1 1 zinc-binding in reverse transcriptase GAGA PF09237.11 NODE_84131_length_189_cov_2.331169_g76190_i0forward_frame_1 - 0.066 13.0 0.0 0.093 12.5 0.0 1.3 1 0 0 1 1 1 0 GAGA factor Ion_trans PF00520.31 NODE_84130_length_189_cov_2.337662_g76189_i0reverse_frame_1 - 0.00013 21.3 2.9 0.00014 21.2 2.9 1.0 1 0 0 1 1 1 1 Ion transport protein NAD_synthase PF02540.17 NODE_84115_length_189_cov_2.564935_g76174_i0forward_frame_1 - 0.038 13.1 0.2 0.043 12.9 0.2 1.0 1 0 0 1 1 1 0 NAD synthase DUF3606 PF12244.8 NODE_84114_length_189_cov_2.564935_g76173_i0reverse_frame_1 - 0.17 11.9 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3606) DUF728 PF05304.12 NODE_84113_length_189_cov_2.564935_g76172_i0forward_frame_1 - 0.028 14.3 1.1 0.03 14.2 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF728) DUF5136 PF17199.4 NODE_84110_length_189_cov_2.629870_g76169_i0reverse_frame_1 - 0.32 10.7 0.1 0.32 10.7 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF5136) TBCC PF07986.12 NODE_84108_length_189_cov_2.688312_g76167_i0forward_frame_1 - 0.27 11.0 4.4 0.4 10.4 4.4 1.5 1 1 0 1 1 1 0 Tubulin binding cofactor C Borrelia_rep PF03183.13 NODE_84108_length_189_cov_2.688312_g76167_i0forward_frame_1 - 2.4 8.3 9.6 1.1 9.4 6.9 1.9 2 0 0 2 2 2 0 Borrelia repeat protein Siva PF05458.12 NODE_84106_length_189_cov_2.792208_g76165_i0reverse_frame_1 - 0.0035 17.0 2.6 0.0044 16.7 2.6 1.1 1 0 0 1 1 1 1 Cd27 binding protein (Siva) Fimbrial PF00419.20 NODE_84103_length_189_cov_2.850649_g76162_i0reverse_frame_1 - 0.0011 19.3 0.1 0.0012 19.1 0.1 1.0 1 0 0 1 1 1 1 Fimbrial protein DUF2087 PF09860.9 NODE_84101_length_189_cov_2.948052_g76160_i0reverse_frame_1 - 0.15 12.2 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) DEAD_2 PF06733.15 NODE_84096_length_189_cov_3.032468_g76155_i0forward_frame_1 - 0.1 12.2 0.0 0.11 12.1 0.0 1.1 1 0 0 1 1 1 0 DEAD_2 Alpha-L-AF_C PF06964.12 NODE_84095_length_189_cov_3.038961_g76154_i0reverse_frame_1 - 0.15 12.2 0.0 0.18 11.9 0.0 1.0 1 0 0 1 1 1 0 Alpha-L-arabinofuranosidase C-terminal domain TPR_11 PF13414.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 7.8e-21 73.5 4.0 2.3e-12 46.4 0.1 2.0 1 1 1 2 2 2 2 TPR repeat TPR_1 PF00515.28 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 1.8e-18 65.5 4.4 1.1e-10 40.8 0.2 3.0 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 6.9e-17 60.5 2.4 2.4e-09 36.9 0.3 2.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 2.4e-14 52.2 2.1 1.7e-08 34.0 0.0 3.0 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 1.6e-11 43.4 2.2 2.4e-07 30.4 0.2 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 7.8e-11 42.1 0.7 4.3e-05 23.7 0.1 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 3.1e-10 39.4 0.6 1e-07 31.4 0.0 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 1.4e-07 31.9 0.2 0.0029 18.1 0.0 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 8.3e-06 25.9 0.2 9.9e-06 25.7 0.2 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 1.1e-05 25.1 1.2 0.00013 21.7 0.1 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 4.3e-05 24.1 0.0 0.0014 19.3 0.0 1.9 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 9.7e-05 22.8 0.3 0.018 15.7 0.1 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.00056 20.5 0.0 0.003 18.3 0.0 1.8 1 1 1 2 2 2 1 Tetratricopeptide repeat TOM20_plant PF06552.12 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.011 15.5 0.0 1.2 8.8 0.0 2.0 1 1 1 2 2 2 0 Plant specific mitochondrial import receptor subunit TOM20 PPR PF01535.20 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.061 13.6 0.4 0.14 12.5 0.2 1.7 2 0 0 2 2 2 0 PPR repeat MIT PF04212.18 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.067 13.3 0.1 0.3 11.2 0.0 1.9 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain Phage_X PF05155.15 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.085 13.3 0.1 0.18 12.3 0.0 1.5 1 1 1 2 2 2 0 Phage X family Surfac_D-trimer PF09006.11 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.086 12.7 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Lung surfactant protein D coiled-coil trimerisation Sel1 PF08238.12 NODE_84093_length_189_cov_3.103896_g76152_i0reverse_frame_1 - 0.6 10.9 4.0 11 6.8 0.5 3.2 3 1 0 3 3 3 0 Sel1 repeat FAF PF11250.8 NODE_84091_length_189_cov_3.220779_g76150_i0reverse_frame_1 - 0.0096 16.1 0.0 0.016 15.4 0.0 1.4 1 0 0 1 1 1 1 Fantastic Four meristem regulator YWFCY PF14293.6 NODE_84089_length_189_cov_3.454545_g76148_i0reverse_frame_1 - 0.035 14.4 0.1 0.045 14.0 0.1 1.3 1 0 0 1 1 1 0 YWFCY protein HAMP PF00672.25 NODE_84085_length_189_cov_3.798701_g76144_i0reverse_frame_1 - 3.5e-11 43.3 0.3 3.9e-11 43.2 0.3 1.1 1 0 0 1 1 1 1 HAMP domain DEFB136 PF17333.2 NODE_84085_length_189_cov_3.798701_g76144_i0forward_frame_1 - 0.04 13.9 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 Beta defensin 136 GerA PF03323.13 NODE_84074_length_189_cov_7.188312_g76133_i0forward_frame_1 - 0.19 10.1 0.1 0.21 10.0 0.1 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein DUF2315 PF10231.9 NODE_84067_length_189_cov_15.019481_g76126_i0reverse_frame_1 - 0.023 14.8 0.2 0.026 14.6 0.2 1.2 1 0 0 1 1 1 0 Apoptogenic protein 1 Toxin_27 PF08099.11 NODE_84064_length_189_cov_16.655844_g76123_i0reverse_frame_1 - 0.11 12.6 0.6 0.2 11.8 0.2 1.6 2 0 0 2 2 2 0 Scorpion calcine family FoP_duplication PF13865.6 NODE_84062_length_189_cov_20.922078_g76121_i0reverse_frame_1 - 2.1 8.9 12.8 2.6 8.7 12.8 1.2 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 DUF1206 PF06724.11 NODE_84062_length_189_cov_20.922078_g76121_i0forward_frame_1 - 0.059 13.5 0.1 0.061 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) Ferlin_C PF16165.5 NODE_84057_length_189_cov_24.331169_g76116_i0reverse_frame_1 - 0.017 15.1 0.8 0.017 15.1 0.8 1.4 1 1 1 2 2 2 0 Ferlin C-terminus NUC205 PF08168.11 NODE_84048_length_189_cov_29.058442_g76107_i0reverse_frame_1 - 0.074 12.6 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 NUC205 domain VMA21 PF09446.10 NODE_84043_length_189_cov_32.857143_g76102_i0reverse_frame_1 - 1.7 8.8 4.9 1.6 8.9 0.3 2.2 2 0 0 2 2 2 0 VMA21-like domain PDGF_N PF04692.13 NODE_84039_length_189_cov_33.857143_g76098_i0forward_frame_1 - 0.0065 17.2 0.0 0.0075 17.0 0.0 1.1 1 0 0 1 1 1 1 Platelet-derived growth factor, N terminal region EPO_TPO PF00758.18 NODE_84037_length_189_cov_36.681818_g76096_i0reverse_frame_1 - 0.05 13.6 0.1 0.053 13.6 0.1 1.1 1 0 0 1 1 1 0 Erythropoietin/thrombopoietin Herpes_UL56 PF04534.12 NODE_84034_length_189_cov_38.441558_g76093_i0forward_frame_1 - 10 5.6 10.7 11 5.4 10.7 1.1 1 0 0 1 1 1 0 Herpesvirus UL56 protein zf-TAZ PF02135.16 NODE_84031_length_189_cov_39.344156_g76090_i0reverse_frame_1 - 0.047 14.1 5.9 0.06 13.8 5.9 1.2 1 0 0 1 1 1 0 TAZ zinc finger DUF5623 PF18536.1 NODE_84031_length_189_cov_39.344156_g76090_i0reverse_frame_1 - 0.13 12.5 0.0 0.15 12.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5623) DUF2770 PF10968.8 NODE_84031_length_189_cov_39.344156_g76090_i0forward_frame_1 - 0.14 12.1 0.2 0.19 11.7 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2770) ApoL PF05461.11 NODE_84015_length_189_cov_49.175325_g76074_i0forward_frame_1 - 0.023 14.0 0.2 0.023 14.0 0.2 1.0 1 0 0 1 1 1 0 Apolipoprotein L UPA_2 PF17809.1 NODE_84006_length_189_cov_60.889610_g76065_i0reverse_frame_1 - 0.032 14.0 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 UPA domain HSM3_C PF18794.1 NODE_84005_length_189_cov_68.811688_g76064_i0reverse_frame_1 - 0.1 12.2 0.2 0.11 12.0 0.2 1.0 1 0 0 1 1 1 0 DNA mismatch repair protein HSM3, C terminal domain DUF4487 PF14868.6 NODE_84003_length_189_cov_72.493506_g76062_i0reverse_frame_1 - 0.36 9.6 3.7 0.37 9.5 3.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4487) DUF2437 PF10370.9 NODE_83999_length_189_cov_82.006494_g76058_i0forward_frame_1 - 0.063 14.2 1.3 3.8 8.5 1.3 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF2437) DivIC PF04977.15 NODE_83995_length_189_cov_105.831169_g76054_i0forward_frame_1 - 0.15 11.8 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 Septum formation initiator Utp13 PF08625.11 NODE_83990_length_189_cov_147.441558_g76049_i0reverse_frame_1 - 0.087 12.7 0.0 0.087 12.7 0.0 1.1 1 0 0 1 1 1 0 Utp13 specific WD40 associated domain PPR_2 PF13041.6 NODE_83986_length_189_cov_176.844156_g76045_i0forward_frame_1 - 0.00049 20.2 0.0 0.00059 20.0 0.0 1.1 1 0 0 1 1 1 1 PPR repeat family PPR PF01535.20 NODE_83986_length_189_cov_176.844156_g76045_i0forward_frame_1 - 0.091 13.0 0.0 1.1 9.7 0.0 2.0 2 0 0 2 2 2 0 PPR repeat PPR_3 PF13812.6 NODE_83986_length_189_cov_176.844156_g76045_i0forward_frame_1 - 0.18 11.9 0.0 0.22 11.6 0.0 1.1 1 0 0 1 1 1 0 Pentatricopeptide repeat domain DUF4875 PF16175.5 NODE_83983_length_189_cov_225.311688_g76042_i0reverse_frame_1 - 0.054 13.6 0.1 0.064 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4875) DUF1980 PF09323.10 NODE_83979_length_189_cov_1092.071429_g76038_i0forward_frame_1 - 1.7 8.6 5.8 1.8 8.5 5.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) zf-CCCH PF00642.24 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.00016 21.5 4.3 0.00021 21.1 4.3 1.2 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.00023 20.9 0.8 0.00035 20.3 0.8 1.2 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.0011 19.0 2.4 0.0036 17.3 2.4 1.9 1 1 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.0049 17.6 1.1 0.0052 17.5 1.1 1.1 1 0 0 1 1 1 1 Torus domain zf-CCCH_2 PF14608.6 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_3 - 0.0069 16.8 0.9 0.0099 16.3 0.9 1.3 1 0 0 1 1 1 1 RNA-binding, Nab2-type zinc finger HTH_43 PF09904.9 NODE_83975_length_190_cov_0.825806_g76034_i0reverse_frame_2 - 0.1 12.6 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn helix FXa_inhibition PF14670.6 NODE_83975_length_190_cov_0.825806_g76034_i0forward_frame_2 - 1.4 9.3 8.8 0.96 9.8 5.5 2.0 2 0 0 2 2 2 0 Coagulation Factor Xa inhibitory site ArfGap PF01412.18 NODE_83974_length_190_cov_0.832258_g76033_i0reverse_frame_3 - 3.5e-08 33.5 0.5 3.8e-08 33.4 0.5 1.1 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf Bromodomain PF00439.25 NODE_83971_length_190_cov_0.916129_g76030_i0forward_frame_3 - 2.3e-07 30.8 0.0 2.9e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Bromodomain Fib_alpha PF08702.10 NODE_83967_length_190_cov_0.967742_g76026_i0reverse_frame_2 - 0.026 14.7 2.1 0.026 14.7 2.1 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DNA_ligase_ZBD PF03119.16 NODE_83965_length_190_cov_0.974194_g76024_i0forward_frame_3 - 0.054 13.5 0.1 0.054 13.5 0.1 2.1 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain RAI16-like PF10257.9 NODE_83958_length_190_cov_1.019355_g76017_i0reverse_frame_2 - 0.004 16.1 0.2 0.0042 16.0 0.2 1.0 1 0 0 1 1 1 1 Retinoic acid induced 16-like protein TAXi_N PF14543.6 NODE_83952_length_190_cov_1.019355_g76011_i0reverse_frame_3 - 0.07 13.4 0.3 0.07 13.4 0.3 1.0 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal Adenylsucc_synt PF00709.21 NODE_83949_length_190_cov_1.019355_g76008_i0reverse_frame_2 - 2e-16 59.9 0.0 2.2e-16 59.8 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase DKNYY PF13644.6 NODE_83949_length_190_cov_1.019355_g76008_i0reverse_frame_2 - 0.025 15.4 0.1 0.026 15.3 0.1 1.1 1 0 0 1 1 1 0 DKNYY family DUF5432 PF17497.2 NODE_83946_length_190_cov_1.025806_g76005_i0reverse_frame_3 - 0.021 14.9 1.0 0.023 14.8 0.4 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5432) Pheromone PF08015.11 NODE_83946_length_190_cov_1.025806_g76005_i0forward_frame_2 - 0.071 14.2 0.0 0.09 13.8 0.0 1.2 1 0 0 1 1 1 0 Fungal mating-type pheromone RPEL PF02755.15 NODE_83945_length_190_cov_1.025806_g76004_i0reverse_frame_2 - 0.029 14.1 0.4 0.029 14.1 0.4 1.8 2 0 0 2 2 2 0 RPEL repeat HEV_ORF1 PF02444.16 NODE_83945_length_190_cov_1.025806_g76004_i0reverse_frame_2 - 0.033 14.7 0.2 0.039 14.5 0.2 1.0 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) UL17 PF17640.2 NODE_83945_length_190_cov_1.025806_g76004_i0reverse_frame_2 - 0.13 12.3 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized UL17 FTR1 PF03239.14 NODE_83942_length_190_cov_1.025806_g76001_i0reverse_frame_3 - 0.02 14.1 0.0 0.021 14.0 0.0 1.0 1 0 0 1 1 1 0 Iron permease FTR1 family Keratin_B2_2 PF13885.6 NODE_83936_length_190_cov_1.025806_g75995_i0reverse_frame_2 - 0.13 12.3 5.0 0.075 13.0 1.5 1.9 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein 17kDa_Anti_2 PF16998.5 NODE_83935_length_190_cov_1.025806_g75994_i0forward_frame_3 - 0.23 11.4 1.4 2 8.4 0.4 1.9 1 1 1 2 2 2 0 17 kDa outer membrane surface antigen LPAM_2 PF13627.6 NODE_83931_length_190_cov_1.025806_g75990_i0forward_frame_2 - 0.011 15.5 1.4 0.017 15.0 1.4 1.3 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site SPG48 PF14764.6 NODE_83928_length_190_cov_1.025806_g75987_i0reverse_frame_2 - 0.045 14.2 0.0 0.05 14.1 0.0 1.1 1 0 0 1 1 1 0 AP-5 complex subunit, vesicle trafficking DUF2793 PF10983.8 NODE_83923_length_190_cov_1.032258_g75982_i0forward_frame_2 - 0.04 13.8 0.1 0.046 13.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2793) EGF_MSP1_1 PF12946.7 NODE_83913_length_190_cov_1.032258_g75972_i0forward_frame_2 - 0.15 12.1 8.9 1.4 9.0 2.4 2.9 2 1 0 2 2 2 0 MSP1 EGF domain 1 cEGF PF12662.7 NODE_83911_length_190_cov_1.032258_g75970_i0forward_frame_2 - 0.12 12.3 0.1 0.29 11.1 0.1 1.7 2 0 0 2 2 2 0 Complement Clr-like EGF-like Protocadherin PF08374.11 NODE_83910_length_190_cov_1.032258_g75969_i0reverse_frame_2 - 1.7 8.6 3.8 1.7 8.6 3.8 1.1 1 0 0 1 1 1 0 Protocadherin ASFV_J13L PF05568.11 NODE_83910_length_190_cov_1.032258_g75969_i0reverse_frame_2 - 6.6 6.4 9.6 7.5 6.3 9.6 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Ac81 PF05820.11 NODE_83910_length_190_cov_1.032258_g75969_i0reverse_frame_2 - 9.5 5.7 12.9 11 5.5 12.9 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 zf-RING_2 PF13639.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 5e-09 36.3 12.4 6e-09 36.1 12.4 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 3.3e-07 30.0 11.2 3.8e-07 29.8 11.2 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 6.1e-05 22.8 12.9 7.9e-05 22.4 12.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.00012 21.9 11.4 0.00016 21.5 11.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.0023 17.7 12.1 0.065 13.0 12.2 2.1 1 1 1 2 2 2 2 RING/Ubox like zinc-binding domain DUF4379 PF14311.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.0028 18.0 5.4 0.0033 17.8 5.4 1.2 1 0 0 1 1 1 1 Probable Zinc-ribbon domain zf-RING_5 PF14634.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.0064 16.4 11.5 0.008 16.1 11.5 1.1 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.065 13.1 11.5 0.45 10.4 11.8 1.9 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.16 12.1 12.2 1.1 9.5 12.3 2.0 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-rbx1 PF12678.7 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.22 11.9 10.4 0.79 10.1 10.4 1.7 1 1 0 1 1 1 0 RING-H2 zinc finger domain FYVE PF01363.21 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 0.64 10.2 10.9 1.5 9.0 10.8 1.7 1 1 0 1 1 1 0 FYVE zinc finger zf-B_box PF00643.24 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 1.4 9.1 12.3 0.7 10.1 6.9 2.2 2 1 0 2 2 2 0 B-box zinc finger zf-RING_11 PF17123.5 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 2.4 8.0 9.5 0.35 10.7 1.2 2.2 2 0 0 2 2 2 0 RING-like zinc finger zf-C4H2 PF10146.9 NODE_83906_length_190_cov_1.032258_g75965_i0reverse_frame_2 - 7.6 6.8 11.0 1.4 9.2 5.9 1.9 1 1 1 2 2 2 0 Zinc finger-containing protein Amnionless PF14828.6 NODE_83900_length_190_cov_1.032258_g75959_i0forward_frame_3 - 0.093 11.5 1.5 0.077 11.8 1.5 1.1 1 0 0 1 1 1 0 Amnionless MSA-2c PF12238.8 NODE_83898_length_190_cov_1.032258_g75957_i0reverse_frame_3 - 5.1 7.0 6.2 4.8 7.1 6.2 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c TPIP1 PF15338.6 NODE_83898_length_190_cov_1.032258_g75957_i0forward_frame_2 - 0.16 12.0 0.6 0.19 11.8 0.6 1.1 1 0 0 1 1 1 0 p53-regulated apoptosis-inducing protein 1 IMS PF00817.20 NODE_83896_length_190_cov_1.032258_g75955_i0reverse_frame_3 - 0.061 13.3 0.0 0.064 13.3 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks432.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks432.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks432.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks432.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:41:31 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF326 PF03860.16 NODE_83888_length_190_cov_1.032258_g75947_i0forward_frame_2 - 0.023 14.7 7.3 0.023 14.7 7.3 1.9 3 0 0 3 3 3 0 Domain of Unknown Function (DUF326) HapK PF11639.8 NODE_83887_length_190_cov_1.032258_g75946_i0forward_frame_3 - 0.18 12.3 0.1 0.21 12.1 0.1 1.1 1 0 0 1 1 1 0 REDY-like protein HapK DUF326 PF03860.16 NODE_83886_length_190_cov_1.032258_g75945_i0reverse_frame_2 - 0.039 13.9 0.4 0.045 13.7 0.4 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF326) PAAR_motif PF05488.13 NODE_83881_length_190_cov_1.032258_g75940_i0reverse_frame_3 - 0.046 13.9 0.5 0.069 13.3 0.5 1.3 1 1 0 1 1 1 0 PAAR motif Prenyltransf PF01255.19 NODE_83877_length_190_cov_1.032258_g75936_i0reverse_frame_2 - 2.1e-06 27.4 0.0 2.6e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase SCNM1_acidic PF15805.5 NODE_83877_length_190_cov_1.032258_g75936_i0reverse_frame_2 - 0.05 13.3 0.0 0.068 12.9 0.0 1.2 1 0 0 1 1 1 0 Acidic C-terminal region of sodium channel modifier 1 SCNM1 TT_ORF2 PF02957.15 NODE_83876_length_190_cov_1.032258_g75935_i0forward_frame_3 - 0.51 11.3 3.2 0.57 11.1 3.2 1.0 1 0 0 1 1 1 0 TT viral ORF2 DUF3649 PF12365.8 NODE_83873_length_190_cov_1.032258_g75932_i0forward_frame_2 - 0.71 9.6 3.1 19 5.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3649) Myb_CC_LHEQLE PF14379.6 NODE_83871_length_190_cov_1.032258_g75930_i0forward_frame_2 - 0.13 12.0 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 MYB-CC type transfactor, LHEQLE motif DUF3669 PF12417.8 NODE_83865_length_190_cov_1.058065_g75924_i0reverse_frame_3 - 0.19 12.0 0.0 0.2 11.9 0.0 1.1 1 0 0 1 1 1 0 Zinc finger protein Ldl_recept_a PF00057.18 NODE_83865_length_190_cov_1.058065_g75924_i0reverse_frame_2 - 0.3 11.3 2.2 0.32 11.2 0.5 1.8 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A CEP44 PF15007.6 NODE_83855_length_190_cov_1.083871_g75914_i0reverse_frame_3 - 0.12 12.5 0.1 0.13 12.4 0.1 1.1 1 0 0 1 1 1 0 Centrosomal spindle body, CEP44 TMPIT PF07851.13 NODE_83853_length_190_cov_1.083871_g75912_i0forward_frame_2 - 0.13 11.5 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF676 PF05057.14 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 2.3e-15 56.7 0.0 2.4e-15 56.7 0.0 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.0015 18.3 0.0 0.0015 18.3 0.0 1.1 1 0 0 1 1 1 1 PGAP1-like protein Lipase_3 PF01764.25 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.012 15.5 0.0 0.012 15.5 0.0 1.1 1 0 0 1 1 1 0 Lipase (class 3) Hydrolase_4 PF12146.8 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.014 14.7 0.0 0.014 14.7 0.0 1.0 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.037 14.6 0.0 0.038 14.6 0.0 1.0 1 0 0 1 1 1 0 Alpha/beta hydrolase family Repressor_Mnt PF11423.8 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.042 13.6 0.5 3 7.7 0.1 2.2 2 0 0 2 2 2 0 Regulatory protein Mnt Abhydrolase_1 PF00561.20 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.057 13.1 0.1 0.073 12.7 0.1 1.1 1 0 0 1 1 1 0 alpha/beta hydrolase fold HHH_2 PF12826.7 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.097 12.8 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF915 PF06028.11 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_3 - 0.12 11.7 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) MCR PF18509.1 NODE_83851_length_190_cov_1.096774_g75910_i0reverse_frame_2 - 0.4 10.3 6.1 0.39 10.3 0.7 2.2 2 0 0 2 2 2 0 Magnetochrome domain Sh_2 PF17512.2 NODE_83850_length_190_cov_1.096774_g75909_i0forward_frame_3 - 0.05 13.4 0.9 0.053 13.3 0.9 1.1 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein CytadhesinP1 PF12378.8 NODE_83849_length_190_cov_1.103226_g75908_i0forward_frame_2 - 0.03 14.5 0.1 0.046 13.9 0.1 1.3 1 0 0 1 1 1 0 Trypsin-sensitive surface-exposed protein DUF5410 PF17422.2 NODE_83843_length_190_cov_1.129032_g75902_i0reverse_frame_3 - 0.033 13.5 0.0 0.033 13.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5410) DpnII PF04556.12 NODE_83841_length_190_cov_1.129032_g75900_i0reverse_frame_2 - 0.036 13.4 0.3 0.037 13.4 0.3 1.1 1 0 0 1 1 1 0 DpnII restriction endonuclease DUF4141 PF13605.6 NODE_83840_length_190_cov_1.129032_g75899_i0reverse_frame_2 - 0.094 12.0 2.2 0.15 11.3 2.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4141) Furin-like_2 PF15913.5 NODE_83839_length_190_cov_1.135484_g75898_i0forward_frame_2 - 0.023 14.8 7.4 0.024 14.8 7.4 1.1 1 0 0 1 1 1 0 Furin-like repeat, cysteine-rich DUF4215 PF13948.6 NODE_83839_length_190_cov_1.135484_g75898_i0forward_frame_2 - 0.028 14.9 3.1 0.028 14.9 3.1 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4215) VSP PF03302.13 NODE_83839_length_190_cov_1.135484_g75898_i0forward_frame_2 - 0.056 12.3 8.1 0.06 12.2 8.1 1.0 1 0 0 1 1 1 0 Giardia variant-specific surface protein Fer4_4 PF12800.7 NODE_83839_length_190_cov_1.135484_g75898_i0forward_frame_2 - 9.2 7.1 11.1 2e+03 -0.2 11.1 2.8 1 1 0 1 1 1 0 4Fe-4S binding domain Beta_helix PF13229.6 NODE_83838_length_190_cov_1.141935_g75897_i0reverse_frame_3 - 0.0001 22.2 0.6 0.0001 22.2 0.6 1.1 1 0 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 NODE_83838_length_190_cov_1.141935_g75897_i0reverse_frame_3 - 0.00051 19.4 0.3 0.00053 19.3 0.3 1.0 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Pardaxin PF07425.11 NODE_83825_length_190_cov_1.193548_g75884_i0forward_frame_2 - 1.7 8.4 6.6 4.3 7.0 0.5 2.2 2 0 0 2 2 2 0 Pardaxin Rad50_zn_hook PF04423.14 NODE_83824_length_190_cov_1.200000_g75883_i0forward_frame_3 - 0.19 11.6 3.6 0.49 10.3 0.1 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-NF-X1 PF01422.17 NODE_83824_length_190_cov_1.200000_g75883_i0forward_frame_3 - 0.28 11.3 0.6 0.28 11.3 0.6 3.0 4 0 0 4 4 4 0 NF-X1 type zinc finger CBF_beta PF02312.17 NODE_83814_length_190_cov_1.225806_g75873_i0forward_frame_3 - 0.06 13.0 0.0 0.061 13.0 0.0 1.1 1 0 0 1 1 1 0 Core binding factor beta subunit SFTA2 PF15210.6 NODE_83813_length_190_cov_1.225806_g75872_i0reverse_frame_2 - 0.052 13.5 0.4 0.059 13.3 0.4 1.1 1 0 0 1 1 1 0 Surfactant-associated protein 2 Defensin_beta PF00711.19 NODE_83812_length_190_cov_1.232258_g75871_i0reverse_frame_2 - 0.052 13.6 1.6 0.052 13.6 1.6 2.2 2 2 0 2 2 2 0 Beta defensin TBSV_P22 PF03558.13 NODE_83804_length_190_cov_1.277419_g75863_i0forward_frame_3 - 0.07 12.6 0.0 0.075 12.5 0.0 1.0 1 0 0 1 1 1 0 TBSV core protein P21/P22 Beta-TrCP_D PF12125.8 NODE_83802_length_190_cov_1.277419_g75861_i0forward_frame_3 - 0.0018 18.1 0.7 0.0018 18.1 0.7 1.8 2 0 0 2 2 2 1 D domain of beta-TrCP zf-CCHC_5 PF14787.6 NODE_83801_length_190_cov_1.277419_g75860_i0reverse_frame_3 - 0.05 13.3 0.6 0.099 12.4 0.1 1.7 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger Ferlin_C PF16165.5 NODE_83798_length_190_cov_1.283871_g75857_i0reverse_frame_2 - 0.003 17.5 1.5 0.0033 17.4 1.5 1.0 1 0 0 1 1 1 1 Ferlin C-terminus MORN PF02493.20 NODE_83790_length_190_cov_1.283871_g75849_i0reverse_frame_3 - 8.8e-07 28.5 5.0 0.02 14.8 0.7 3.2 3 0 0 3 3 3 3 MORN repeat OATP PF03137.20 NODE_83784_length_190_cov_1.290323_g75843_i0forward_frame_2 - 0.0084 14.5 0.8 0.0089 14.4 0.8 1.0 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family PUCC PF03209.15 NODE_83784_length_190_cov_1.290323_g75843_i0forward_frame_2 - 0.017 14.2 0.6 0.018 14.1 0.6 1.0 1 0 0 1 1 1 0 PUCC protein DUF2206 PF09971.9 NODE_83784_length_190_cov_1.290323_g75843_i0forward_frame_2 - 0.048 12.4 1.5 0.053 12.3 1.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) COX7C PF02935.16 NODE_83784_length_190_cov_1.290323_g75843_i0forward_frame_2 - 0.086 13.1 0.5 0.13 12.5 0.5 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc Zn_ribbon_SprT PF17283.2 NODE_83782_length_190_cov_1.290323_g75841_i0reverse_frame_2 - 2.2 8.3 10.6 0.29 11.1 4.0 2.1 1 1 1 2 2 2 0 SprT-like zinc ribbon domain DUF4215 PF13948.6 NODE_83777_length_190_cov_1.309677_g75836_i0reverse_frame_3 - 0.0053 17.2 19.5 0.0053 17.2 19.5 1.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4215) DUF2116 PF09889.9 NODE_83777_length_190_cov_1.309677_g75836_i0reverse_frame_3 - 0.093 12.7 1.2 9.7 6.3 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Cornifin PF02389.15 NODE_83775_length_190_cov_1.329032_g75834_i0reverse_frame_3 - 0.012 15.8 6.5 0.015 15.4 6.5 1.1 1 0 0 1 1 1 0 Cornifin (SPRR) family FtsJ PF01728.19 NODE_83771_length_190_cov_1.335484_g75830_i0reverse_frame_3 - 1.9e-13 50.9 0.0 1.9e-13 50.9 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase DUF3149 PF11346.8 NODE_83769_length_190_cov_1.367742_g75828_i0reverse_frame_3 - 0.18 11.5 4.0 0.29 10.8 4.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3149) Cortexin PF11057.8 NODE_83762_length_190_cov_1.406452_g75821_i0reverse_frame_2 - 0.026 14.4 0.1 0.032 14.1 0.1 1.1 1 0 0 1 1 1 0 Cortexin of kidney zf-CDGSH PF09360.10 NODE_83761_length_190_cov_1.412903_g75820_i0forward_frame_2 - 1.4 9.2 8.2 0.74 10.1 0.4 2.3 1 1 1 2 2 2 0 Iron-binding zinc finger CDGSH type NS3_envE PF02723.14 NODE_83759_length_190_cov_1.412903_g75818_i0reverse_frame_3 - 0.16 12.1 5.0 0.21 11.7 5.0 1.3 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Noelin-1 PF12308.8 NODE_83757_length_190_cov_1.419355_g75816_i0forward_frame_2 - 0.0042 17.0 2.6 0.0042 17.0 2.6 1.1 1 0 0 1 1 1 1 Neurogenesis glycoprotein Corona_S2 PF01601.16 NODE_83757_length_190_cov_1.419355_g75816_i0forward_frame_2 - 3.2 6.1 7.0 3.4 6.0 7.0 1.0 1 0 0 1 1 1 0 Coronavirus S2 glycoprotein PAC2 PF09754.9 NODE_83756_length_190_cov_1.419355_g75815_i0reverse_frame_2 - 0.089 12.8 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 PAC2 family zf_Rg PF17915.1 NODE_83756_length_190_cov_1.419355_g75815_i0reverse_frame_2 - 0.85 9.1 3.9 0.83 9.1 2.8 1.5 2 0 0 2 2 2 0 Reverse gyrase zinc finger DUF658 PF04936.12 NODE_83756_length_190_cov_1.419355_g75815_i0forward_frame_2 - 0.014 15.2 0.0 0.015 15.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF658) VHL PF01847.16 NODE_83756_length_190_cov_1.419355_g75815_i0forward_frame_2 - 0.058 13.3 0.0 0.064 13.2 0.0 1.1 1 0 0 1 1 1 0 VHL beta domain Fer2 PF00111.27 NODE_83754_length_190_cov_1.432258_g75813_i0forward_frame_3 - 0.0023 17.8 0.1 0.0034 17.3 0.1 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain MASE3 PF17159.4 NODE_83750_length_190_cov_1.445161_g75809_i0forward_frame_3 - 0.2 11.2 0.0 0.2 11.2 0.0 1.0 1 0 0 1 1 1 0 Membrane-associated sensor domain FAM86 PF14904.6 NODE_83746_length_190_cov_1.458065_g75805_i0forward_frame_2 - 0.048 13.7 0.0 0.061 13.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function GPR_Gpa2_C PF11970.8 NODE_83745_length_190_cov_1.464516_g75804_i0forward_frame_3 - 0.028 14.5 0.6 0.043 13.9 0.6 1.3 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term MDFI PF15316.6 NODE_83742_length_190_cov_1.470968_g75801_i0reverse_frame_2 - 0.065 13.3 8.8 0.071 13.2 8.8 1.0 1 0 0 1 1 1 0 MyoD family inhibitor 3-alpha PF03475.14 NODE_83742_length_190_cov_1.470968_g75801_i0forward_frame_2 - 0.061 13.2 0.2 0.11 12.4 0.2 1.5 1 1 0 1 1 1 0 3-alpha domain GNAT_like PF18407.1 NODE_83741_length_190_cov_1.470968_g75800_i0reverse_frame_2 - 0.078 13.3 0.2 0.1 12.9 0.2 1.1 1 0 0 1 1 1 0 GCN5-related N-acetyltransferase like domain DUF1385 PF07136.11 NODE_83740_length_190_cov_1.470968_g75799_i0forward_frame_2 - 0.053 12.8 2.0 0.059 12.7 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) DUF1980 PF09323.10 NODE_83740_length_190_cov_1.470968_g75799_i0forward_frame_2 - 0.86 9.5 2.9 0.97 9.3 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Herpes_pp38 PF04846.13 NODE_83739_length_190_cov_1.477419_g75798_i0forward_frame_2 - 0.047 13.6 0.7 0.063 13.2 0.7 1.1 1 0 0 1 1 1 0 Herpesvirus pp38 phosphoprotein ABC_membrane PF00664.23 NODE_83736_length_190_cov_1.490323_g75795_i0reverse_frame_3 - 0.029 14.0 0.0 0.029 14.0 0.0 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region OGG_N PF07934.12 NODE_83736_length_190_cov_1.490323_g75795_i0reverse_frame_3 - 0.079 13.0 0.0 0.089 12.9 0.0 1.1 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain Hist_deacetyl PF00850.19 NODE_83733_length_190_cov_1.496774_g75792_i0reverse_frame_3 - 1.3e-06 28.1 0.0 1.4e-06 28.0 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Kazal_2 PF07648.15 NODE_83733_length_190_cov_1.496774_g75792_i0reverse_frame_3 - 0.086 13.0 0.6 0.086 13.0 0.6 1.9 1 1 1 2 2 2 0 Kazal-type serine protease inhibitor domain Dyp_perox PF04261.12 NODE_83730_length_190_cov_1.516129_g75789_i0reverse_frame_2 - 0.16 10.9 0.0 0.17 10.9 0.0 1.0 1 0 0 1 1 1 0 Dyp-type peroxidase family Gla PF00594.20 NODE_83726_length_190_cov_1.529032_g75785_i0reverse_frame_3 - 0.29 11.4 0.6 0.67 10.2 0.1 1.7 2 0 0 2 2 2 0 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain Palm_thioest PF02089.15 NODE_83725_length_190_cov_1.535484_g75784_i0forward_frame_3 - 2.7e-13 50.3 0.1 2.8e-13 50.3 0.1 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase HJURP_C PF12347.8 NODE_83722_length_190_cov_1.535484_g75781_i0forward_frame_2 - 0.058 13.4 0.3 0.08 13.0 0.3 1.2 1 0 0 1 1 1 0 Holliday junction regulator protein family C-terminal repeat YhdB PF14148.6 NODE_83720_length_190_cov_1.535484_g75779_i0forward_frame_3 - 0.0025 17.9 0.4 0.0031 17.6 0.4 1.2 1 0 0 1 1 1 1 YhdB-like protein DUF3500 PF12006.8 NODE_83715_length_190_cov_1.541935_g75774_i0reverse_frame_3 - 0.14 11.6 0.5 0.14 11.6 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3500) SLR1-BP PF07333.12 NODE_83713_length_190_cov_1.541935_g75772_i0reverse_frame_3 - 0.0041 17.5 1.3 0.0051 17.2 1.3 1.2 1 0 0 1 1 1 1 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Fez1 PF06818.15 NODE_83711_length_190_cov_1.541935_g75770_i0forward_frame_2 - 0.014 15.8 1.6 0.016 15.7 1.6 1.2 1 0 0 1 1 1 0 Fez1 DivIC PF04977.15 NODE_83711_length_190_cov_1.541935_g75770_i0forward_frame_2 - 0.12 12.1 2.7 0.13 12.1 0.9 1.8 1 1 1 2 2 2 0 Septum formation initiator TSC22 PF01166.18 NODE_83711_length_190_cov_1.541935_g75770_i0forward_frame_2 - 0.18 12.1 3.4 1.1 9.7 0.1 2.3 1 1 0 2 2 2 0 TSC-22/dip/bun family E3_binding PF02817.17 NODE_83704_length_190_cov_1.548387_g75763_i0reverse_frame_2 - 0.096 13.0 0.6 0.88 10.0 0.1 2.0 2 0 0 2 2 2 0 e3 binding domain GIT1_C PF12205.8 NODE_83703_length_190_cov_1.548387_g75762_i0forward_frame_2 - 0.16 12.1 0.7 0.19 11.9 0.7 1.1 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term Trep_dent_lipo PF09710.10 NODE_83702_length_190_cov_1.548387_g75761_i0forward_frame_3 - 0.27 10.1 0.0 0.29 10.0 0.0 1.0 1 0 0 1 1 1 0 Treponema clustered lipoprotein (Trep_dent_lipo) Glycophorin_A PF01102.18 NODE_83701_length_190_cov_1.548387_g75760_i0reverse_frame_2 - 0.069 13.4 2.0 0.075 13.3 1.4 1.4 1 1 0 1 1 1 0 Glycophorin A OAD_gamma PF04277.13 NODE_83700_length_190_cov_1.548387_g75759_i0reverse_frame_3 - 0.047 14.3 2.5 0.059 14.0 2.5 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain PBP1_TM PF14812.6 NODE_83700_length_190_cov_1.548387_g75759_i0reverse_frame_2 - 0.43 11.0 0.0 0.43 11.0 0.0 1.6 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal MafB19-deam PF14437.6 NODE_83695_length_190_cov_1.548387_g75754_i0forward_frame_3 - 0.0095 15.7 0.2 0.01 15.6 0.2 1.1 1 0 0 1 1 1 1 MafB19-like deaminase TOM6p PF15184.6 NODE_83694_length_190_cov_1.548387_g75753_i0forward_frame_2 - 0.092 12.5 0.2 0.1 12.4 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial import receptor subunit TOM6 homolog Ribonuclease PF00545.20 NODE_83687_length_190_cov_1.548387_g75746_i0forward_frame_2 - 0.0064 17.2 0.0 0.0068 17.1 0.0 1.1 1 0 0 1 1 1 1 ribonuclease Alpha-amylase PF00128.24 NODE_83680_length_190_cov_1.612903_g75739_i0reverse_frame_3 - 2.2e-21 76.8 0.3 2.3e-21 76.7 0.3 1.0 1 0 0 1 1 1 1 Alpha amylase, catalytic domain DUF2759 PF10958.8 NODE_83675_length_190_cov_1.625806_g75734_i0forward_frame_3 - 0.02 14.6 0.0 0.035 13.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) DUF1398 PF07166.11 NODE_83674_length_190_cov_1.638710_g75733_i0reverse_frame_2 - 0.041 13.9 0.0 0.05 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) SWIM PF04434.17 NODE_83670_length_190_cov_1.664516_g75729_i0forward_frame_3 - 4.4e-05 23.0 3.5 0.0024 17.5 1.9 2.1 2 0 0 2 2 2 2 SWIM zinc finger H2O2_YaaD PF03883.14 NODE_83669_length_190_cov_1.670968_g75728_i0reverse_frame_3 - 2e-23 83.1 0.1 2.1e-23 83.1 0.1 1.0 1 0 0 1 1 1 1 Peroxide stress protein YaaA DUF2332 PF10094.9 NODE_83668_length_190_cov_1.677419_g75727_i0forward_frame_3 - 0.18 11.3 0.1 0.18 11.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2332) Lipase_C PF18067.1 NODE_83668_length_190_cov_1.677419_g75727_i0forward_frame_2 - 0.011 16.3 0.0 0.012 16.1 0.0 1.1 1 0 0 1 1 1 0 Lipase C-terminal domain GAD-like PF08887.11 NODE_83667_length_190_cov_1.677419_g75726_i0forward_frame_2 - 0.13 12.1 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 GAD-like domain SASRP1 PF15160.6 NODE_83664_length_190_cov_1.703226_g75723_i0reverse_frame_2 - 0.13 11.9 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated serine-rich protein 1 TRAM1 PF08390.11 NODE_83663_length_190_cov_1.703226_g75722_i0reverse_frame_3 - 0.13 11.9 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 TRAM1-like protein PRIMA1 PF16101.5 NODE_83663_length_190_cov_1.703226_g75722_i0forward_frame_2 - 0.35 10.9 3.8 0.39 10.8 3.8 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 UPF0220 PF05255.11 NODE_83662_length_190_cov_1.716129_g75721_i0reverse_frame_3 - 0.0089 15.6 1.3 0.01 15.4 1.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0220) VASP_tetra PF08776.11 NODE_83662_length_190_cov_1.716129_g75721_i0reverse_frame_3 - 0.21 11.2 0.5 0.38 10.4 0.5 1.4 1 1 0 1 1 1 0 VASP tetramerisation domain DUF5408 PF17402.2 NODE_83660_length_190_cov_1.722581_g75719_i0reverse_frame_2 - 6.4 6.7 8.3 27 4.7 8.3 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5408) EF-hand_2 PF09068.11 NODE_83657_length_190_cov_1.774194_g75716_i0reverse_frame_3 - 0.057 13.6 0.1 0.064 13.4 0.1 1.0 1 0 0 1 1 1 0 EF hand DUF1247 PF06851.11 NODE_83657_length_190_cov_1.774194_g75716_i0reverse_frame_2 - 0.045 13.7 0.0 0.047 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) Mitoc_L55 PF09776.9 NODE_83655_length_190_cov_1.780645_g75714_i0reverse_frame_2 - 0.085 12.6 0.1 0.26 11.0 0.0 1.7 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L55 TrkH PF02386.16 NODE_83655_length_190_cov_1.780645_g75714_i0forward_frame_3 - 9.7e-16 57.3 0.0 1e-15 57.2 0.0 1.0 1 0 0 1 1 1 1 Cation transport protein HTH_45 PF14947.6 NODE_83652_length_190_cov_1.793548_g75711_i0forward_frame_2 - 0.033 14.2 0.5 0.13 12.3 0.5 1.8 1 1 0 1 1 1 0 Winged helix-turn-helix RVT_2 PF07727.14 NODE_83649_length_190_cov_1.800000_g75708_i0reverse_frame_2 - 0.14 11.8 0.2 0.13 11.8 0.2 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) PPI_Ypi1 PF07491.11 NODE_83648_length_190_cov_1.806452_g75707_i0forward_frame_3 - 0.093 12.6 3.4 0.12 12.3 3.4 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor I-EGF_1 PF18372.1 NODE_83646_length_190_cov_1.819355_g75705_i0forward_frame_2 - 0.18 11.9 0.8 0.18 11.9 0.8 2.4 2 0 0 2 2 2 0 Integrin beta epidermal growth factor like domain 1 Lamprin PF06403.11 NODE_83645_length_190_cov_1.838710_g75704_i0forward_frame_3 - 0.00072 19.5 4.7 0.00076 19.4 4.7 1.2 1 0 0 1 1 1 1 Lamprin Sporozoite_P67 PF05642.11 NODE_83645_length_190_cov_1.838710_g75704_i0forward_frame_3 - 0.31 9.1 3.2 0.31 9.1 3.2 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Lamprin PF06403.11 NODE_83645_length_190_cov_1.838710_g75704_i0forward_frame_2 - 0.00019 21.4 1.8 0.00019 21.4 1.8 1.0 1 0 0 1 1 1 1 Lamprin Pox_A_type_inc PF04508.12 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.0016 18.2 2.2 0.35 10.8 0.1 2.3 2 0 0 2 2 2 2 Viral A-type inclusion protein repeat Dynamitin PF04912.14 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.0093 15.3 0.2 0.0096 15.3 0.2 1.1 1 0 0 1 1 1 1 Dynamitin Striatin PF08232.12 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.022 15.3 0.2 0.025 15.2 0.2 1.0 1 0 0 1 1 1 0 Striatin family ADIP PF11559.8 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.065 13.3 4.0 0.074 13.1 4.0 1.0 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding XhlA PF10779.9 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 0.27 11.5 2.0 0.32 11.2 2.0 1.1 1 0 0 1 1 1 0 Haemolysin XhlA M PF02370.16 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 1 10.1 10.2 6 7.8 1.8 2.5 2 1 0 2 2 2 0 M protein repeat HalX PF08663.10 NODE_83643_length_190_cov_1.845161_g75702_i0reverse_frame_2 - 3.1 8.2 7.6 10 6.5 1.6 2.0 1 1 1 2 2 2 0 HalX domain RCDG1 PF15725.5 NODE_83641_length_190_cov_1.864516_g75700_i0reverse_frame_2 - 0.4 11.1 4.2 0.25 11.8 3.1 1.3 1 1 0 1 1 1 0 Renal cancer differentiation gene 1 protein NifQ PF04891.12 NODE_83639_length_190_cov_1.890323_g75698_i0reverse_frame_3 - 0.032 14.6 0.1 0.033 14.5 0.1 1.0 1 0 0 1 1 1 0 NifQ Kazal_2 PF07648.15 NODE_83639_length_190_cov_1.890323_g75698_i0forward_frame_3 - 1.3 9.2 5.0 3.3 7.9 0.3 2.5 3 0 0 3 3 3 0 Kazal-type serine protease inhibitor domain TOH_N PF12549.8 NODE_83637_length_190_cov_1.896774_g75696_i0reverse_frame_2 - 0.044 13.6 0.3 0.081 12.8 0.3 1.5 1 0 0 1 1 1 0 Tyrosine hydroxylase N terminal Amelin PF05111.12 NODE_83634_length_190_cov_1.916129_g75693_i0reverse_frame_3 - 0.044 12.9 0.2 0.045 12.9 0.2 1.0 1 0 0 1 1 1 0 Ameloblastin precursor (Amelin) DUF2680 PF10925.8 NODE_83634_length_190_cov_1.916129_g75693_i0forward_frame_2 - 0.018 15.1 0.0 0.027 14.5 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2680) Lebercilin PF15619.6 NODE_83634_length_190_cov_1.916129_g75693_i0forward_frame_2 - 0.04 13.6 0.1 0.044 13.4 0.1 1.0 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease BLOC1_2 PF10046.9 NODE_83634_length_190_cov_1.916129_g75693_i0forward_frame_2 - 0.054 13.8 0.0 0.064 13.6 0.0 1.0 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Rabaptin PF03528.15 NODE_83633_length_190_cov_1.916129_g75692_i0forward_frame_3 - 0.038 12.7 0.3 0.038 12.7 0.3 1.0 1 0 0 1 1 1 0 Rabaptin PRANC PF09372.10 NODE_83629_length_190_cov_1.941935_g75688_i0reverse_frame_3 - 0.036 14.4 0.1 0.04 14.2 0.1 1.3 1 1 0 1 1 1 0 PRANC domain Shisa PF13908.6 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.0056 16.9 3.0 0.0061 16.8 3.0 1.1 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator CYYR1 PF10873.8 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.0069 16.9 1.3 0.0076 16.7 1.3 1.1 1 0 0 1 1 1 1 Cysteine and tyrosine-rich protein 1 PIRT PF15099.6 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.056 13.0 0.0 0.059 13.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family Herpes_UL73 PF03554.13 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.083 12.9 3.1 0.1 12.6 3.1 1.1 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein DUF485 PF04341.12 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.091 12.7 0.1 0.097 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF485 TMEM154 PF15102.6 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.1 12.5 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family EphA2_TM PF14575.6 NODE_83624_length_190_cov_1.961290_g75683_i0reverse_frame_2 - 0.3 12.0 2.1 0.43 11.5 2.1 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain PfkB PF00294.24 NODE_83621_length_190_cov_1.993548_g75680_i0forward_frame_3 - 1.1e-12 47.8 0.1 1.3e-12 47.6 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase SSP160 PF06933.11 NODE_83614_length_190_cov_2.045161_g75673_i0reverse_frame_3 - 0.58 8.3 16.1 0.54 8.4 16.1 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 UMP1 PF05348.11 NODE_83613_length_190_cov_2.051613_g75672_i0reverse_frame_3 - 0.1 12.8 0.0 0.11 12.8 0.0 1.0 1 0 0 1 1 1 0 Proteasome maturation factor UMP1 Herpes_ICP4_C PF03585.14 NODE_83613_length_190_cov_2.051613_g75672_i0reverse_frame_2 - 0.016 14.0 0.2 0.018 13.8 0.2 1.0 1 0 0 1 1 1 0 Herpesvirus ICP4-like protein C-terminal region Thionin PF00321.17 NODE_83609_length_190_cov_2.058065_g75668_i0reverse_frame_2 - 0.092 13.2 4.8 0.17 12.4 4.8 1.5 1 0 0 1 1 1 0 Plant thionin Mur_ligase PF01225.25 NODE_83607_length_190_cov_2.058065_g75666_i0reverse_frame_3 - 0.024 14.9 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 Mur ligase family, catalytic domain TPR_12 PF13424.6 NODE_83606_length_190_cov_2.064516_g75665_i0forward_frame_2 - 0.0021 18.3 0.1 0.059 13.7 0.1 2.0 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_83606_length_190_cov_2.064516_g75665_i0forward_frame_2 - 0.0026 17.5 0.1 0.22 11.4 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_83606_length_190_cov_2.064516_g75665_i0forward_frame_2 - 0.0076 16.3 0.1 1.5 9.1 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat Spc7_C2 PF15577.6 NODE_83603_length_190_cov_2.090323_g75662_i0forward_frame_3 - 0.13 12.4 0.2 0.19 11.8 0.2 1.2 1 0 0 1 1 1 0 Spc7_C2 FAINT PF04385.15 NODE_83602_length_190_cov_2.096774_g75661_i0reverse_frame_3 - 0.0038 17.3 0.0 0.0045 17.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function, DUF529 Gcd10p PF04189.13 NODE_83602_length_190_cov_2.096774_g75661_i0reverse_frame_2 - 0.062 12.4 0.3 0.065 12.3 0.3 1.0 1 0 0 1 1 1 0 Gcd10p family NADH_dehy_S2_C PF06444.11 NODE_83602_length_190_cov_2.096774_g75661_i0forward_frame_3 - 0.32 11.5 6.6 1.7 9.2 1.2 2.2 1 1 1 2 2 2 0 NADH dehydrogenase subunit 2 C-terminus DUF2733 PF10813.8 NODE_83597_length_190_cov_2.148387_g75656_i0forward_frame_2 - 1.7 8.5 5.0 4.4 7.2 3.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) DUF1422 PF07226.11 NODE_83594_length_190_cov_2.206452_g75653_i0forward_frame_2 - 0.0035 17.3 0.6 0.0045 17.0 0.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1422) Pkinase PF00069.25 NODE_83593_length_190_cov_2.232258_g75652_i0reverse_frame_2 - 2.1e-16 60.1 0.1 2.2e-16 60.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_83593_length_190_cov_2.232258_g75652_i0reverse_frame_2 - 1.3e-14 54.2 0.0 1.3e-14 54.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Retrotran_gag_2 PF14223.6 NODE_83592_length_190_cov_2.245161_g75651_i0reverse_frame_2 - 0.0041 16.8 0.0 0.0044 16.7 0.0 1.1 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type Choline_sulf_C PF12411.8 NODE_83592_length_190_cov_2.245161_g75651_i0reverse_frame_2 - 0.11 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Choline sulfatase enzyme C terminal PHZA_PHZB PF03284.13 NODE_83592_length_190_cov_2.245161_g75651_i0reverse_frame_2 - 0.15 11.7 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Phenazine biosynthesis protein A/B Pkinase PF00069.25 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 2.6e-19 69.6 0.1 2.8e-19 69.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 8.5e-07 28.5 0.0 8.5e-07 28.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Choline_kinase PF01633.20 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.00022 20.9 0.1 0.00025 20.7 0.1 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.00053 20.0 0.0 0.00061 19.8 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.0011 18.3 0.1 0.0013 18.1 0.1 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.0015 17.4 0.0 0.0015 17.4 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 NODE_83590_length_190_cov_2.264516_g75649_i0reverse_frame_3 - 0.0021 17.0 0.1 0.0023 17.0 0.1 1.0 1 0 0 1 1 1 1 Haspin like kinase domain Ribosomal_L36e PF01158.18 NODE_83589_length_190_cov_2.270968_g75648_i0reverse_frame_2 - 0.052 13.8 7.1 0.072 13.3 7.1 1.3 1 0 0 1 1 1 0 Ribosomal protein L36e Fes1 PF08609.10 NODE_83589_length_190_cov_2.270968_g75648_i0reverse_frame_2 - 0.054 14.4 3.1 0.056 14.3 3.1 1.0 1 0 0 1 1 1 0 Nucleotide exchange factor Fes1 DUF3824 PF12868.7 NODE_83589_length_190_cov_2.270968_g75648_i0reverse_frame_2 - 4.2 8.0 4.7 5 7.8 4.7 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) GlcNAc-1_reg PF18440.1 NODE_83586_length_190_cov_2.309677_g75645_i0reverse_frame_3 - 0.12 12.7 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative GlcNAc-1 phosphotransferase regulatory domain BssC_TutF PF08201.11 NODE_83585_length_190_cov_2.316129_g75644_i0reverse_frame_2 - 0.027 14.4 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 BssC/TutF protein Defb50 PF17546.2 NODE_83585_length_190_cov_2.316129_g75644_i0forward_frame_3 - 0.41 10.6 3.8 0.62 10.0 3.8 1.4 1 1 0 1 1 1 0 Beta defensin 50 Abi_HHR PF07815.14 NODE_83583_length_190_cov_2.322581_g75642_i0reverse_frame_3 - 0.15 12.2 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Abl-interactor HHR zf-C2H2 PF00096.26 NODE_83579_length_190_cov_2.361290_g75638_i0forward_frame_3 - 0.0015 18.9 0.2 0.0042 17.5 0.2 1.8 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 NODE_83579_length_190_cov_2.361290_g75638_i0forward_frame_3 - 0.0042 17.0 0.2 0.011 15.8 0.2 1.8 1 0 0 1 1 1 1 C2H2-type zinc finger PetN PF03742.14 NODE_83576_length_190_cov_2.387097_g75635_i0reverse_frame_3 - 0.011 15.6 2.6 0.021 14.7 2.6 1.4 1 0 0 1 1 1 0 PetN FTHFS PF01268.19 NODE_83575_length_190_cov_2.406452_g75634_i0forward_frame_2 - 3.1e-23 81.8 0.0 3.3e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase MHCassoc_trimer PF08831.10 NODE_83572_length_190_cov_2.477419_g75631_i0reverse_frame_2 - 0.081 12.9 0.1 0.087 12.8 0.1 1.2 1 0 0 1 1 1 0 Class II MHC-associated invariant chain trimerisation domain Comm PF15957.5 NODE_83570_length_190_cov_2.483871_g75629_i0forward_frame_3 - 0.043 14.2 1.5 0.055 13.8 1.5 1.1 1 0 0 1 1 1 0 Commissureless BCS1_N PF08740.11 NODE_83566_length_190_cov_2.522581_g75625_i0forward_frame_2 - 0.029 14.3 0.2 0.037 14.0 0.2 1.0 1 0 0 1 1 1 0 BCS1 N terminal HlyIII PF03006.20 NODE_83565_length_190_cov_2.535484_g75624_i0reverse_frame_3 - 1.6e-06 28.0 1.2 2e-06 27.7 1.2 1.1 1 0 0 1 1 1 1 Haemolysin-III related Popeye PF04831.13 NODE_83561_length_190_cov_2.580645_g75620_i0reverse_frame_3 - 2.9 8.1 8.4 3.1 7.9 8.4 1.0 1 0 0 1 1 1 0 Popeye protein conserved region zf-rbx1 PF12678.7 NODE_83558_length_190_cov_2.651613_g75617_i0reverse_frame_3 - 0.0029 17.8 0.8 0.0048 17.2 0.8 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain CDC24_OB3 PF17244.2 NODE_83558_length_190_cov_2.651613_g75617_i0forward_frame_3 - 0.68 9.6 9.1 0.71 9.5 9.1 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Gal-3-0_sulfotr PF06990.11 NODE_83549_length_190_cov_2.774194_g75608_i0forward_frame_3 - 0.02 13.8 0.2 0.021 13.7 0.2 1.0 1 0 0 1 1 1 0 Galactose-3-O-sulfotransferase UvrB PF12344.8 NODE_83546_length_190_cov_2.851613_g75605_i0reverse_frame_3 - 0.032 14.1 0.2 0.085 12.7 0.1 1.7 2 0 0 2 2 2 0 Ultra-violet resistance protein B Gal_Lectin PF02140.18 NODE_83545_length_190_cov_2.916129_g75604_i0reverse_frame_2 - 0.049 14.1 1.5 0.054 13.9 1.5 1.1 1 0 0 1 1 1 0 Galactose binding lectin domain Flexi_CP PF00286.20 NODE_83545_length_190_cov_2.916129_g75604_i0reverse_frame_2 - 0.1 12.5 0.7 0.13 12.1 0.7 1.2 1 0 0 1 1 1 0 Viral coat protein Cas_CXXC_CXXC PF09706.10 NODE_83545_length_190_cov_2.916129_g75604_i0forward_frame_3 - 0.13 12.5 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) Lamprin PF06403.11 NODE_83539_length_190_cov_3.154839_g75598_i0reverse_frame_2 - 0.44 10.5 12.5 3.2 7.7 2.4 2.0 1 1 1 2 2 2 0 Lamprin DUF5587 PF17825.1 NODE_83536_length_190_cov_3.393548_g75595_i0forward_frame_3 - 0.044 11.1 1.5 0.042 11.1 1.5 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5587) DUF3094 PF11293.8 NODE_83535_length_190_cov_3.458065_g75594_i0forward_frame_2 - 0.05 13.3 0.2 0.14 11.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) zf-CCCH_4 PF18044.1 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 2e-05 24.2 1.5 3e-05 23.7 1.5 1.3 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 0.0001 22.3 2.4 0.00015 21.7 2.4 1.3 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 0.00011 22.8 0.2 0.00014 22.6 0.2 1.1 1 0 0 1 1 1 1 Torus domain zf-CCCH PF00642.24 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 0.00017 21.4 0.8 0.00026 20.8 0.8 1.3 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) DEAD_2 PF06733.15 NODE_83526_length_190_cov_5.122581_g75585_i0reverse_frame_3 - 0.068 12.8 0.5 0.073 12.7 0.5 1.1 1 0 0 1 1 1 0 DEAD_2 zf-C3HC4_2 PF13923.6 NODE_83526_length_190_cov_5.122581_g75585_i0forward_frame_2 - 0.52 10.2 6.1 0.14 12.0 2.8 1.8 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF4250 PF14056.6 NODE_83525_length_190_cov_5.341935_g75584_i0reverse_frame_3 - 0.043 13.8 0.4 0.068 13.1 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) Bse634I PF07832.11 NODE_83524_length_190_cov_5.464516_g75583_i0reverse_frame_2 - 0.02 14.3 0.6 0.021 14.2 0.6 1.0 1 0 0 1 1 1 0 Cfr10I/Bse634I restriction endonuclease RGS12_usC PF16612.5 NODE_83523_length_190_cov_6.400000_g75582_i0reverse_frame_2 - 0.11 13.0 0.4 0.14 12.6 0.4 1.1 1 0 0 1 1 1 0 C-terminal unstructured region of RGS12 Myco_arth_vir_N PF09610.10 NODE_83519_length_190_cov_17.393548_g75578_i0reverse_frame_2 - 1.9 8.6 7.6 2.6 8.2 7.6 1.2 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) Argos PF11581.8 NODE_83518_length_190_cov_17.483871_g75577_i0forward_frame_3 - 0.05 13.6 0.3 0.057 13.5 0.3 1.1 1 0 0 1 1 1 0 Antagonist of EGFR signalling, Argos HPIH PF13323.6 NODE_83516_length_190_cov_17.967742_g75575_i0forward_frame_3 - 0.18 11.7 0.5 0.18 11.6 0.5 1.1 1 0 0 1 1 1 0 N-terminal domain with HPIH motif SLATT_1 PF18181.1 NODE_83514_length_190_cov_18.870968_g75573_i0forward_frame_3 - 0.1 12.5 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 1 DUF131 PF01998.17 NODE_83513_length_190_cov_19.251613_g75572_i0reverse_frame_3 - 0.14 11.8 0.9 0.21 11.3 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF131 Methyltransf_PK PF05891.12 NODE_83513_length_190_cov_19.251613_g75572_i0forward_frame_3 - 0.066 12.7 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase RP854 PF17460.2 NODE_83512_length_190_cov_19.948387_g75571_i0forward_frame_2 - 0.21 11.3 6.8 0.21 11.3 6.8 1.2 1 0 0 1 1 1 0 Uncharacterized protein RP854 FixQ PF05545.11 NODE_83510_length_190_cov_21.270968_g75569_i0reverse_frame_2 - 8.6 6.4 9.9 12 5.9 9.9 1.2 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ DUF4746 PF15928.5 NODE_83510_length_190_cov_21.270968_g75569_i0forward_frame_2 - 0.017 14.6 0.1 0.017 14.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Phi_1 PF04674.12 NODE_83510_length_190_cov_21.270968_g75569_i0forward_frame_2 - 0.029 13.7 0.0 0.029 13.7 0.0 1.1 1 0 0 1 1 1 0 Phosphate-induced protein 1 conserved region Rubredoxin_2 PF18073.1 NODE_83508_length_190_cov_24.174194_g75567_i0reverse_frame_3 - 0.035 13.8 0.9 0.57 10.0 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain TORC_M PF12885.7 NODE_83508_length_190_cov_24.174194_g75567_i0forward_frame_3 - 0.062 13.2 0.0 0.071 13.0 0.0 1.0 1 0 0 1 1 1 0 Transducer of regulated CREB activity middle domain DUF4914 PF16260.5 NODE_83507_length_190_cov_25.264516_g75566_i0forward_frame_2 - 0.09 10.9 0.1 0.093 10.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4914) EP400_N PF15790.5 NODE_83505_length_190_cov_27.741935_g75564_i0reverse_frame_3 - 0.099 11.5 0.3 0.1 11.4 0.3 1.0 1 0 0 1 1 1 0 E1A-binding protein p400, N-terminal Levi_coat PF01819.17 NODE_83505_length_190_cov_27.741935_g75564_i0reverse_frame_2 - 0.067 13.2 0.1 0.075 13.0 0.1 1.0 1 0 0 1 1 1 0 Levivirus coat protein Pex2_Pex12 PF04757.14 NODE_83504_length_190_cov_27.832258_g75563_i0reverse_frame_2 - 0.077 12.6 0.1 0.077 12.6 0.1 1.0 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks433.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks433.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks433.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks433.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- zn-ribbon_14 PF16503.5 NODE_83502_length_190_cov_28.322581_g75561_i0forward_frame_2 - 0.034 13.6 0.4 0.034 13.6 0.4 1.7 2 0 0 2 2 2 0 Zinc-ribbon Secapin PF17521.2 NODE_83499_length_190_cov_30.006452_g75558_i0forward_frame_2 - 0.01 15.6 1.3 0.01 15.6 1.3 1.7 1 1 1 2 2 2 0 Honey bee peptides SLC3A2_N PF16028.5 NODE_83499_length_190_cov_30.006452_g75558_i0forward_frame_2 - 0.1 12.2 0.4 0.43 10.2 0.0 1.8 1 1 1 2 2 2 0 Solute carrier family 3 member 2 N-terminus aGPT-Pplase1 PF18723.1 NODE_83498_length_190_cov_31.193548_g75557_i0forward_frame_3 - 0.0035 16.8 0.0 0.0035 16.8 0.0 1.1 1 0 0 1 1 1 1 alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 1 UCMA PF17085.5 NODE_83495_length_190_cov_31.535484_g75554_i0reverse_frame_3 - 0.12 12.4 12.7 0.12 12.3 12.7 1.0 1 0 0 1 1 1 0 Unique cartilage matrix associated protein DUF4337 PF14235.6 NODE_83495_length_190_cov_31.535484_g75554_i0reverse_frame_3 - 0.7 10.0 6.2 0.77 9.9 6.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DNA_pol3_a_NII PF11490.8 NODE_83495_length_190_cov_31.535484_g75554_i0reverse_frame_3 - 2 8.3 9.2 2.5 8.0 9.2 1.3 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II RtxA PF07634.11 NODE_83492_length_190_cov_34.206452_g75551_i0reverse_frame_3 - 0.18 12.4 0.0 0.31 11.7 0.0 1.4 1 0 0 1 1 1 0 RtxA repeat Il13Ra_Ig PF18001.1 NODE_83491_length_190_cov_34.509677_g75550_i0forward_frame_2 - 0.076 13.1 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Interleukin-13 receptor subunit alpha Ig-like domain Oxidored_q5_N PF01059.17 NODE_83488_length_190_cov_35.651613_g75547_i0forward_frame_3 - 0.034 14.2 4.6 0.036 14.1 4.6 1.0 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus MPS-4 PF17523.2 NODE_83488_length_190_cov_35.651613_g75547_i0forward_frame_2 - 0.36 11.0 7.6 0.41 10.8 7.6 1.1 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Histone_H2A_C PF16211.5 NODE_83486_length_190_cov_36.322581_g75545_i0forward_frame_3 - 2.5 7.9 5.5 3.8 7.3 5.5 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A HofP PF10748.9 NODE_83479_length_190_cov_40.606452_g75538_i0reverse_frame_3 - 0.11 12.0 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 DNA utilization proteins HofP zf-FLZ PF04570.14 NODE_83479_length_190_cov_40.606452_g75538_i0reverse_frame_2 - 0.073 12.6 2.3 0.26 10.8 2.3 1.9 1 1 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 DUF1899 PF08953.11 NODE_83479_length_190_cov_40.606452_g75538_i0forward_frame_3 - 0.074 12.9 0.0 0.093 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1899) PspB PF06667.12 NODE_83478_length_190_cov_41.045161_g75537_i0reverse_frame_2 - 0.28 11.3 2.5 0.59 10.2 2.5 1.7 1 1 0 1 1 1 0 Phage shock protein B Adeno_E3_CR1 PF02440.15 NODE_83477_length_190_cov_41.864516_g75536_i0reverse_frame_3 - 0.13 12.0 2.7 0.79 9.5 0.7 2.0 1 1 1 2 2 2 0 Adenovirus E3 region protein CR1 Cpn10 PF00166.21 NODE_83472_length_190_cov_45.329032_g75531_i0forward_frame_2 - 0.055 13.5 0.0 0.055 13.5 0.0 1.0 1 0 0 1 1 1 0 Chaperonin 10 Kd subunit FAM117 PF15388.6 NODE_83470_length_190_cov_47.580645_g75529_i0reverse_frame_3 - 0.027 13.9 0.0 0.027 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein Family FAM117 RRM_1 PF00076.22 NODE_83468_length_190_cov_51.051613_g75527_i0reverse_frame_3 - 0.024 14.5 0.1 0.034 14.0 0.1 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GCP_C_terminal PF04130.13 NODE_83466_length_190_cov_53.354839_g75525_i0forward_frame_3 - 0.02 14.3 0.1 0.021 14.3 0.1 1.1 1 0 0 1 1 1 0 Gamma tubulin complex component C-terminal ADD_DNMT3 PF17980.1 NODE_83465_length_190_cov_53.406452_g75524_i0forward_frame_3 - 0.016 15.2 0.8 0.022 14.7 0.8 1.2 1 0 0 1 1 1 0 Cysteine rich ADD domain in DNMT3 STOP PF05217.12 NODE_83462_length_190_cov_55.967742_g75521_i0forward_frame_3 - 4.4 7.7 10.5 6.7 7.1 10.5 1.3 1 0 0 1 1 1 0 STOP protein DUF753 PF05444.12 NODE_83459_length_190_cov_62.167742_g75518_i0reverse_frame_3 - 0.037 14.0 5.9 0.045 13.7 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF753) DUF2138 PF09909.9 NODE_83457_length_190_cov_66.322581_g75516_i0reverse_frame_2 - 0.15 10.4 0.0 0.16 10.3 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2138) TMEM234 PF10639.9 NODE_83457_length_190_cov_66.322581_g75516_i0reverse_frame_2 - 0.2 11.7 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 Putative transmembrane family 234 OATP PF03137.20 NODE_83457_length_190_cov_66.322581_g75516_i0forward_frame_2 - 0.018 13.3 0.4 0.02 13.2 0.4 1.0 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family TPR_9 PF13371.6 NODE_83457_length_190_cov_66.322581_g75516_i0forward_frame_2 - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF5436 PF17504.2 NODE_83454_length_190_cov_73.225806_g75513_i0reverse_frame_3 - 1.4 9.3 4.7 6.1 7.2 4.7 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5436) TMEM154 PF15102.6 NODE_83451_length_190_cov_80.154839_g75510_i0reverse_frame_3 - 0.19 11.6 0.6 0.22 11.4 0.6 1.1 1 0 0 1 1 1 0 TMEM154 protein family Ceramidase PF05875.12 NODE_83450_length_190_cov_81.496774_g75509_i0forward_frame_3 - 0.031 13.7 0.0 0.031 13.7 0.0 1.0 1 0 0 1 1 1 0 Ceramidase YmgB PF10798.8 NODE_83448_length_190_cov_88.490323_g75507_i0reverse_frame_3 - 0.018 14.9 0.1 0.041 13.7 0.0 1.5 2 0 0 2 2 2 0 Biofilm development protein YmgB/AriR DUF4817 PF16087.5 NODE_83448_length_190_cov_88.490323_g75507_i0reverse_frame_2 - 0.17 11.7 1.7 0.17 11.7 0.9 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain (DUF4817) DUF4547 PF15080.6 NODE_83447_length_190_cov_88.806452_g75506_i0forward_frame_2 - 1.1 8.8 4.7 1.4 8.5 4.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4547) DUF3578 PF12102.8 NODE_83444_length_190_cov_108.490323_g75503_i0reverse_frame_3 - 0.036 13.6 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3578) KELK PF15796.5 NODE_83442_length_190_cov_116.187097_g75501_i0reverse_frame_2 - 0.029 14.8 0.7 0.033 14.6 0.7 1.2 1 0 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF4773 PF15998.5 NODE_83441_length_190_cov_156.238710_g75500_i0forward_frame_2 - 0.015 15.8 0.0 0.016 15.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4773) DUF2063 PF09836.9 NODE_83439_length_190_cov_186.116129_g75498_i0reverse_frame_2 - 0.092 13.0 0.5 0.11 12.7 0.5 1.1 1 0 0 1 1 1 0 Putative DNA-binding domain zf_C2H2_ZHX PF18387.1 NODE_83437_length_190_cov_242.593548_g75496_i0forward_frame_3 - 0.099 12.3 1.0 0.12 12.1 0.6 1.5 1 1 0 1 1 1 0 Zinc-fingers and homeoboxes C2H2 finger domain PHD PF00628.29 NODE_83431_length_191_cov_0.839744_g75490_i0forward_frame_3 - 0.0065 16.3 7.8 0.014 15.3 7.8 1.6 1 1 1 2 2 2 1 PHD-finger zf-B_box PF00643.24 NODE_83431_length_191_cov_0.839744_g75490_i0forward_frame_3 - 0.35 11.1 9.0 0.48 10.6 9.0 1.3 1 0 0 1 1 1 0 B-box zinc finger CDT1_C PF16679.5 NODE_83430_length_191_cov_0.839744_g75489_i0forward_frame_2 - 0.033 14.6 0.1 0.038 14.4 0.1 1.1 1 0 0 1 1 1 0 DNA replication factor Cdt1 C-terminal domain CpXC PF14353.6 NODE_83421_length_191_cov_0.935897_g75480_i0forward_frame_2 - 0.046 13.7 1.7 0.052 13.6 1.7 1.1 1 0 0 1 1 1 0 CpXC protein Phage_GPL PF05926.11 NODE_83420_length_191_cov_0.942308_g75479_i0reverse_frame_2 - 0.16 12.0 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Phage head completion protein (GPL) Glyco_hydro_1 PF00232.18 NODE_83417_length_191_cov_0.987179_g75476_i0forward_frame_3 - 0.21 10.0 0.0 0.24 9.8 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 1 FXR_C1 PF16096.5 NODE_83414_length_191_cov_1.012821_g75473_i0reverse_frame_3 - 0.034 14.3 0.2 0.034 14.3 0.2 1.4 2 0 0 2 2 2 0 Fragile X-related 1 protein C-terminal region 2 I-set PF07679.16 NODE_83414_length_191_cov_1.012821_g75473_i0reverse_frame_3 - 0.089 12.9 0.0 0.089 12.9 0.0 1.1 1 0 0 1 1 1 0 Immunoglobulin I-set domain TOBE_2 PF08402.10 NODE_83414_length_191_cov_1.012821_g75473_i0reverse_frame_2 - 0.13 12.4 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 TOBE domain CaMBD PF02888.16 NODE_83409_length_191_cov_1.019231_g75468_i0forward_frame_3 - 0.064 13.4 0.2 0.084 13.1 0.2 1.2 1 0 0 1 1 1 0 Calmodulin binding domain PepSY_2 PF13670.6 NODE_83407_length_191_cov_1.019231_g75466_i0reverse_frame_3 - 0.1 12.6 0.3 0.12 12.4 0.3 1.1 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain Bac_surface_Ag PF01103.23 NODE_83404_length_191_cov_1.019231_g75463_i0forward_frame_3 - 1.3e-07 31.5 0.0 1.3e-07 31.5 0.0 1.0 1 0 0 1 1 1 1 Surface antigen CTV_P33 PF07184.11 NODE_83399_length_191_cov_1.019231_g75458_i0forward_frame_2 - 0.021 13.9 0.1 0.021 13.9 0.1 1.0 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein Arm_3 PF16186.5 NODE_83395_length_191_cov_1.019231_g75454_i0forward_frame_3 - 0.13 11.8 0.3 0.17 11.5 0.3 1.2 1 0 0 1 1 1 0 Atypical Arm repeat RAMP PF04901.13 NODE_83395_length_191_cov_1.019231_g75454_i0forward_frame_2 - 0.049 13.6 0.1 0.053 13.5 0.1 1.1 1 0 0 1 1 1 0 Receptor activity modifying family DUF3923 PF13061.6 NODE_83389_length_191_cov_1.025641_g75448_i0reverse_frame_2 - 0.087 12.9 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3923) YHS PF04945.13 NODE_83389_length_191_cov_1.025641_g75448_i0forward_frame_2 - 0.034 14.2 0.0 0.047 13.8 0.0 1.2 1 0 0 1 1 1 0 YHS domain Syja_N PF02383.18 NODE_83387_length_191_cov_1.025641_g75446_i0reverse_frame_2 - 2.1e-07 30.6 0.2 2.4e-07 30.4 0.2 1.0 1 0 0 1 1 1 1 SacI homology domain D_CNTX PF17492.2 NODE_83386_length_191_cov_1.025641_g75445_i0reverse_frame_2 - 0.015 15.4 0.9 0.026 14.7 0.9 1.4 1 0 0 1 1 1 0 Delta Ctenitoxins IBB PF01749.20 NODE_83383_length_191_cov_1.025641_g75442_i0reverse_frame_2 - 1.5e-05 25.3 2.0 1.7e-05 25.2 2.0 1.1 1 0 0 1 1 1 1 Importin beta binding domain LD_cluster2 PF18163.1 NODE_83381_length_191_cov_1.025641_g75440_i0reverse_frame_3 - 0.0097 15.5 0.1 0.012 15.2 0.1 1.1 1 0 0 1 1 1 1 SLOG cluster2 ADD_DNMT3 PF17980.1 NODE_83375_length_191_cov_1.025641_g75434_i0reverse_frame_2 - 0.043 13.8 0.3 0.064 13.2 0.3 1.3 1 0 0 1 1 1 0 Cysteine rich ADD domain in DNMT3 HAUS2 PF15003.6 NODE_83373_length_191_cov_1.025641_g75432_i0reverse_frame_2 - 0.1 12.3 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 2 Spem1 PF15670.5 NODE_83373_length_191_cov_1.025641_g75432_i0forward_frame_3 - 9.1 5.8 9.1 9.1 5.8 9.1 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 Ank_4 PF13637.6 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 1.8e-05 25.2 0.0 2.3e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 8.5e-05 22.8 0.0 0.00011 22.4 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 0.00017 22.1 0.0 0.00017 22.1 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 0.002 18.5 0.0 0.0036 17.7 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeat Ank PF00023.30 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_3 - 0.01 16.2 0.0 0.014 15.8 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeat VWA_N2 PF16164.5 NODE_83371_length_191_cov_1.025641_g75430_i0forward_frame_2 - 0.035 14.3 1.4 0.04 14.1 1.4 1.2 1 0 0 1 1 1 0 VWA N-terminal DTW PF03942.15 NODE_83369_length_191_cov_1.025641_g75428_i0forward_frame_3 - 0.017 14.9 0.0 0.018 14.7 0.0 1.1 1 0 0 1 1 1 0 DTW domain AAA_28 PF13521.6 NODE_83369_length_191_cov_1.025641_g75428_i0forward_frame_3 - 0.029 14.6 0.0 0.03 14.6 0.0 1.0 1 0 0 1 1 1 0 AAA domain LRR_1 PF00560.33 NODE_83363_length_191_cov_1.025641_g75422_i0forward_frame_2 - 0.17 12.5 2.7 0.35 11.6 2.7 1.9 1 1 0 1 1 1 0 Leucine Rich Repeat SepSecS PF05889.13 NODE_83355_length_191_cov_1.025641_g75414_i0reverse_frame_3 - 0.025 13.3 0.0 0.025 13.3 0.0 1.0 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS SMC_N PF02463.19 NODE_83353_length_191_cov_1.025641_g75412_i0reverse_frame_2 - 4.4e-06 26.3 0.0 4.4e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 NODE_83353_length_191_cov_1.025641_g75412_i0reverse_frame_2 - 0.0047 17.1 0.0 0.006 16.8 0.0 1.1 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AA_permease PF00324.21 NODE_83349_length_191_cov_1.025641_g75408_i0reverse_frame_2 - 0.0085 14.7 0.1 0.0085 14.7 0.1 1.0 1 0 0 1 1 1 1 Amino acid permease DUF4984 PF16372.5 NODE_83348_length_191_cov_1.025641_g75407_i0reverse_frame_2 - 0.062 13.2 0.1 0.064 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4984) TMEM154 PF15102.6 NODE_83346_length_191_cov_1.025641_g75405_i0forward_frame_3 - 0.29 11.0 6.3 0.33 10.8 6.3 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF5131 PF07505.11 NODE_83337_length_191_cov_1.025641_g75396_i0forward_frame_3 - 0.093 12.2 0.0 0.094 12.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF5131) YukD PF08817.10 NODE_83337_length_191_cov_1.025641_g75396_i0forward_frame_2 - 0.12 13.1 0.2 0.16 12.7 0.2 1.3 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD DUF2670 PF10875.8 NODE_83332_length_191_cov_1.064103_g75391_i0forward_frame_2 - 0.014 15.5 0.4 0.016 15.4 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2670) BRI3BP PF14965.6 NODE_83330_length_191_cov_1.083333_g75389_i0reverse_frame_3 - 0.14 11.6 0.3 0.17 11.4 0.3 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 DUF2890 PF11081.8 NODE_83330_length_191_cov_1.083333_g75389_i0forward_frame_3 - 0.053 13.6 0.0 0.057 13.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) Sushi_2 PF09014.10 NODE_83329_length_191_cov_1.083333_g75388_i0reverse_frame_2 - 0.02 14.8 1.2 3.5 7.6 0.1 2.1 1 1 1 2 2 2 0 Beta-2-glycoprotein-1 fifth domain DUF3996 PF13161.6 NODE_83328_length_191_cov_1.089744_g75387_i0forward_frame_3 - 0.0076 16.0 0.0 0.0088 15.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3996) DUF3136 PF11334.8 NODE_83323_length_191_cov_1.108974_g75382_i0forward_frame_3 - 0.013 15.3 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) CENP-H PF05837.12 NODE_83323_length_191_cov_1.108974_g75382_i0forward_frame_3 - 0.12 12.8 0.0 0.12 12.8 0.0 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) B-block_TFIIIC PF04182.12 NODE_83313_length_191_cov_1.153846_g75372_i0reverse_frame_3 - 0.093 12.9 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC TRAM1 PF08390.11 NODE_83312_length_191_cov_1.166667_g75371_i0forward_frame_2 - 0.63 9.7 4.3 0.23 11.1 1.5 1.7 2 0 0 2 2 2 0 TRAM1-like protein DUF1736 PF08409.11 NODE_83309_length_191_cov_1.173077_g75368_i0forward_frame_3 - 1.3 9.1 6.7 0.74 9.8 1.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1736) PAN_3 PF08277.12 NODE_83307_length_191_cov_1.179487_g75366_i0forward_frame_2 - 1 9.2 6.1 0.16 11.8 1.9 1.8 1 1 1 2 2 2 0 PAN-like domain Cytomega_TRL10 PF06084.11 NODE_83306_length_191_cov_1.185897_g75365_i0forward_frame_3 - 0.96 9.5 2.7 1.1 9.3 2.7 1.0 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein HMG14_17 PF01101.18 NODE_83304_length_191_cov_1.198718_g75363_i0reverse_frame_3 - 0.012 16.6 3.0 0.013 16.5 3.0 1.1 1 0 0 1 1 1 0 HMG14 and HMG17 Zn_dep_PLPC PF00882.18 NODE_83302_length_191_cov_1.205128_g75361_i0reverse_frame_2 - 0.015 15.3 0.2 0.015 15.3 0.2 1.1 1 0 0 1 1 1 0 Zinc dependent phospholipase C TcdB_toxin_midC PF12255.8 NODE_83301_length_191_cov_1.205128_g75360_i0forward_frame_3 - 0.1 12.7 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Insecticide toxin TcdB middle/C-terminal region DUF2207 PF09972.9 NODE_83294_length_191_cov_1.224359_g75353_i0reverse_frame_3 - 3.9 6.1 3.7 4.1 6.1 3.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) NEMP PF10225.9 NODE_83294_length_191_cov_1.224359_g75353_i0forward_frame_3 - 1.1 8.9 1.9 0.98 9.0 1.9 1.0 1 0 0 1 1 1 0 NEMP family FpoO PF10621.9 NODE_83293_length_191_cov_1.224359_g75352_i0forward_frame_2 - 0.0013 19.0 0.2 0.0014 18.9 0.2 1.1 1 0 0 1 1 1 1 F420H2 dehydrogenase subunit FpoO YbgS PF13985.6 NODE_83293_length_191_cov_1.224359_g75352_i0forward_frame_2 - 0.098 12.9 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 YbgS-like protein B3R PF17057.5 NODE_83290_length_191_cov_1.237179_g75349_i0reverse_frame_3 - 0.065 13.4 0.1 0.069 13.4 0.1 1.1 1 0 0 1 1 1 0 Poxviridae B3 protein FANCI_HD1 PF14679.6 NODE_83289_length_191_cov_1.237179_g75348_i0reverse_frame_3 - 0.037 14.0 2.7 0.042 13.8 2.7 1.1 1 0 0 1 1 1 0 FANCI helical domain 1 FBPase_glpX PF03320.13 NODE_83289_length_191_cov_1.237179_g75348_i0reverse_frame_2 - 1.5e-26 93.0 1.2 1.6e-26 92.9 1.2 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MCM_N PF14551.6 NODE_83287_length_191_cov_1.243590_g75346_i0reverse_frame_2 - 1e-06 29.2 0.3 1e-06 29.2 0.3 1.0 1 0 0 1 1 1 1 MCM N-terminal domain RACo_C_ter PF14574.6 NODE_83284_length_191_cov_1.256410_g75343_i0forward_frame_2 - 0.066 12.3 0.0 0.066 12.3 0.0 1.0 1 0 0 1 1 1 0 C-terminal domain of RACo the ASKHA domain Peptidase_M3 PF01432.20 NODE_83283_length_191_cov_1.262821_g75342_i0forward_frame_2 - 0.13 11.5 0.1 0.14 11.4 0.1 1.0 1 0 0 1 1 1 0 Peptidase family M3 HERV-K_REC PF15695.5 NODE_83282_length_191_cov_1.269231_g75341_i0reverse_frame_2 - 0.17 11.9 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Rec (regulator of expression encoded by corf) of HERV-K-113 Peptidase_C54 PF03416.19 NODE_83279_length_191_cov_1.275641_g75338_i0reverse_frame_3 - 0.012 15.0 0.0 0.013 15.0 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C54 PIG-F PF06699.11 NODE_83279_length_191_cov_1.275641_g75338_i0forward_frame_2 - 0.0039 17.4 0.0 0.0042 17.3 0.0 1.0 1 0 0 1 1 1 1 GPI biosynthesis protein family Pig-F DUF782 PF05614.11 NODE_83274_length_191_cov_1.275641_g75333_i0reverse_frame_3 - 0.024 15.0 0.0 0.029 14.7 0.0 1.1 1 0 0 1 1 1 0 Circovirus protein of unknown function (DUF782) SAM_KSR1 PF13543.6 NODE_83272_length_191_cov_1.282051_g75331_i0reverse_frame_2 - 0.061 13.5 0.1 0.064 13.4 0.1 1.0 1 0 0 1 1 1 0 SAM like domain present in kinase suppressor RAS 1 LRV_FeS PF05484.11 NODE_83270_length_191_cov_1.282051_g75329_i0reverse_frame_3 - 0.091 12.8 0.2 0.16 12.0 0.0 1.5 2 0 0 2 2 2 0 LRV protein FeS4 cluster Microvir_lysis PF04517.12 NODE_83269_length_191_cov_1.282051_g75328_i0reverse_frame_2 - 0.11 12.5 1.2 0.11 12.5 0.1 1.6 2 0 0 2 2 2 0 Microvirus lysis protein (E), C terminus DUF5408 PF17402.2 NODE_83268_length_191_cov_1.282051_g75327_i0reverse_frame_2 - 0.035 14.0 0.2 0.045 13.6 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5408) CTV_P6 PF06706.11 NODE_83268_length_191_cov_1.282051_g75327_i0reverse_frame_2 - 0.062 13.0 3.6 0.11 12.2 3.6 1.5 1 1 0 1 1 1 0 Citrus tristeza virus 6-kDa protein Bundlin PF05307.11 NODE_83266_length_191_cov_1.282051_g75325_i0forward_frame_3 - 0.044 13.6 0.1 0.072 12.9 0.1 1.4 1 0 0 1 1 1 0 Bundlin NADH-u_ox-rdase PF10785.9 NODE_83265_length_191_cov_1.282051_g75324_i0reverse_frame_3 - 0.12 13.1 0.0 0.13 12.9 0.0 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit SFTA2 PF15210.6 NODE_83260_length_191_cov_1.294872_g75319_i0forward_frame_3 - 0.072 13.0 0.0 0.094 12.7 0.0 1.3 1 0 0 1 1 1 0 Surfactant-associated protein 2 His_Phos_2 PF00328.22 NODE_83257_length_191_cov_1.314103_g75316_i0forward_frame_2 - 0.029 13.7 0.0 0.031 13.6 0.0 1.0 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) Flagellin_N PF00669.20 NODE_83246_length_191_cov_1.352564_g75305_i0reverse_frame_2 - 0.051 13.7 0.1 0.054 13.6 0.1 1.1 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region APA3_viroporin PF11289.8 NODE_83242_length_191_cov_1.371795_g75301_i0reverse_frame_3 - 1.3 8.5 6.0 1.4 8.4 6.0 1.0 1 0 0 1 1 1 0 Coronavirus accessory protein 3a HECT PF00632.25 NODE_83242_length_191_cov_1.371795_g75301_i0forward_frame_3 - 1.6e-13 50.9 0.1 1.7e-13 50.8 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) HTH_Bact PF18768.1 NODE_83242_length_191_cov_1.371795_g75301_i0forward_frame_2 - 0.00031 20.3 0.6 0.00039 19.9 0.6 1.2 1 0 0 1 1 1 1 Helix-turn-helix bacterial domain PHBC_N PF12551.8 NODE_83240_length_191_cov_1.391026_g75299_i0forward_frame_2 - 0.027 14.2 3.0 0.068 13.0 0.2 2.2 2 0 0 2 2 2 0 Poly-beta-hydroxybutyrate polymerase N terminal CytoC_RC PF02276.18 NODE_83239_length_191_cov_1.403846_g75298_i0forward_frame_3 - 0.093 12.1 0.0 0.11 11.8 0.0 1.0 1 0 0 1 1 1 0 Photosynthetic reaction centre cytochrome C subunit Cnn_1N PF07989.11 NODE_83234_length_191_cov_1.416667_g75293_i0forward_frame_2 - 0.002 18.2 2.3 0.0022 18.1 2.3 1.1 1 0 0 1 1 1 1 Centrosomin N-terminal motif 1 BRE1 PF08647.11 NODE_83234_length_191_cov_1.416667_g75293_i0forward_frame_2 - 0.011 15.8 2.8 0.012 15.6 2.8 1.1 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase HALZ PF02183.18 NODE_83234_length_191_cov_1.416667_g75293_i0forward_frame_2 - 0.034 14.4 6.3 3.8 7.8 0.1 3.0 2 1 1 3 3 3 0 Homeobox associated leucine zipper UFD1 PF03152.14 NODE_83234_length_191_cov_1.416667_g75293_i0forward_frame_2 - 0.046 13.2 0.3 0.053 13.0 0.3 1.3 1 1 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 DUF326 PF03860.16 NODE_83229_length_191_cov_1.448718_g75288_i0forward_frame_2 - 0.047 13.7 7.8 0.047 13.7 7.8 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF326) zf-C3HC4_3 PF13920.6 NODE_83229_length_191_cov_1.448718_g75288_i0forward_frame_2 - 1.6 8.7 13.8 7.6 6.5 13.8 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF983 PF06170.12 NODE_83229_length_191_cov_1.448718_g75288_i0forward_frame_2 - 4.2 7.9 6.6 8.1 6.9 0.3 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF983) DUF1453 PF07301.11 NODE_83224_length_191_cov_1.480769_g75283_i0forward_frame_3 - 0.016 15.2 0.1 0.018 15.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1453) MEIOC PF15189.6 NODE_83223_length_191_cov_1.487179_g75282_i0forward_frame_2 - 0.025 14.2 0.0 0.026 14.1 0.0 1.0 1 0 0 1 1 1 0 Meiosis-specific coiled-coil domain-containing protein MEIOC IFT57 PF10498.9 NODE_83221_length_191_cov_1.487179_g75280_i0forward_frame_3 - 1.2 8.0 2.4 1.2 8.1 2.4 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Psb28 PF03912.14 NODE_83217_length_191_cov_1.500000_g75276_i0forward_frame_2 - 0.11 12.8 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Psb28 protein LmjF365940-deam PF14421.6 NODE_83216_length_191_cov_1.500000_g75275_i0forward_frame_3 - 0.067 12.8 0.1 0.067 12.8 0.1 1.0 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases MORN PF02493.20 NODE_83215_length_191_cov_1.500000_g75274_i0reverse_frame_2 - 2e-05 24.2 2.0 0.00012 21.7 0.7 2.5 3 0 0 3 3 3 1 MORN repeat Endonuc-EcoRV PF09233.11 NODE_83215_length_191_cov_1.500000_g75274_i0reverse_frame_2 - 0.049 13.0 0.1 0.053 12.9 0.1 1.0 1 0 0 1 1 1 0 Restriction endonuclease EcoRV P5-ATPase PF12409.8 NODE_83211_length_191_cov_1.506410_g75270_i0forward_frame_2 - 0.3 11.2 3.4 0.34 11.0 3.4 1.1 1 0 0 1 1 1 0 P5-type ATPase cation transporter DUF4131 PF13567.6 NODE_83211_length_191_cov_1.506410_g75270_i0forward_frame_2 - 3.4 7.3 6.1 4.3 7.0 6.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) IncE PF17627.2 NODE_83209_length_191_cov_1.512821_g75268_i0forward_frame_2 - 0.17 11.9 4.5 0.19 11.7 4.5 1.1 1 0 0 1 1 1 0 Inclusion membrane protein E Meiosis_expr PF15163.6 NODE_83207_length_191_cov_1.512821_g75266_i0reverse_frame_3 - 0.047 14.4 0.4 0.055 14.1 0.4 1.1 1 0 0 1 1 1 0 Meiosis-expressed EAL PF00563.20 NODE_83202_length_191_cov_1.525641_g75261_i0reverse_frame_3 - 8.6e-15 54.9 0.0 9.1e-15 54.8 0.0 1.0 1 0 0 1 1 1 1 EAL domain Kelch_6 PF13964.6 NODE_83198_length_191_cov_1.532051_g75257_i0reverse_frame_3 - 0.14 12.5 1.3 0.21 11.9 1.3 1.2 1 0 0 1 1 1 0 Kelch motif SR-25 PF10500.9 NODE_83198_length_191_cov_1.532051_g75257_i0forward_frame_2 - 1.2 8.7 6.9 1.4 8.5 6.9 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Bap31_Bap29_C PF18035.1 NODE_83191_length_191_cov_1.538462_g75250_i0forward_frame_2 - 0.14 12.2 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain RdRP_2 PF00978.21 NODE_83190_length_191_cov_1.538462_g75249_i0reverse_frame_2 - 0.00012 21.1 0.2 0.00015 20.8 0.2 1.0 1 0 0 1 1 1 1 RNA dependent RNA polymerase E1_4HB PF16191.5 NODE_83189_length_191_cov_1.538462_g75248_i0reverse_frame_3 - 0.14 12.4 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin-activating enzyme E1 four-helix bundle zinc_ribbon_12 PF11331.8 NODE_83185_length_191_cov_1.538462_g75244_i0forward_frame_2 - 3.9 7.3 8.2 16 5.4 1.3 3.1 2 2 1 3 3 3 0 Probable zinc-ribbon domain DUF4133 PF13571.6 NODE_83184_length_191_cov_1.538462_g75243_i0reverse_frame_2 - 4.2 7.8 12.4 5 7.5 12.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) ADK_lid PF05191.14 NODE_83177_length_191_cov_1.538462_g75236_i0reverse_frame_3 - 0.031 14.3 0.1 0.042 13.8 0.1 1.3 1 0 0 1 1 1 0 Adenylate kinase, active site lid Neur_chan_memb PF02932.16 NODE_83176_length_191_cov_1.538462_g75235_i0forward_frame_3 - 0.059 13.4 0.1 0.059 13.4 0.1 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CBFB_NFYA PF02045.15 NODE_83175_length_191_cov_1.544872_g75234_i0reverse_frame_3 - 0.75 10.5 6.0 0.99 10.1 5.7 1.5 1 1 0 1 1 1 0 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B CcmD PF04995.14 NODE_83175_length_191_cov_1.544872_g75234_i0forward_frame_3 - 3.9 7.6 15.3 5.4 7.2 3.2 3.1 1 1 2 3 3 3 0 Heme exporter protein D (CcmD) UBA_e1_thiolCys PF10585.9 NODE_83173_length_191_cov_1.557692_g75232_i0forward_frame_2 - 0.027 14.4 0.1 0.027 14.4 0.1 1.1 1 0 0 1 1 1 0 Ubiquitin-activating enzyme active site Glycos_transf_2 PF00535.26 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 8.9e-14 51.7 0.1 1e-13 51.5 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 2.1e-07 31.1 0.0 2.3e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 0.0001 21.9 0.1 0.00011 21.7 0.1 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Par3_HAL_N_term PF12053.8 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 0.094 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 N-terminal of Par3 and HAL proteins PqqD PF05402.12 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) zf-DNA_Pol PF08996.10 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_2 - 0.038 13.7 4.9 0.042 13.6 4.9 1.1 1 0 0 1 1 1 0 DNA Polymerase alpha zinc finger Cys_rich_KTR PF14205.6 NODE_83172_length_191_cov_1.570513_g75231_i0reverse_frame_2 - 1.6 8.6 7.4 2.7 7.9 7.4 1.4 1 0 0 1 1 1 0 Cysteine-rich KTR mRNA_decap_C PF16741.5 NODE_83171_length_191_cov_1.583333_g75230_i0forward_frame_2 - 0.13 11.6 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 mRNA-decapping enzyme C-terminus HAP2-GCS1 PF10699.9 NODE_83165_length_191_cov_1.615385_g75224_i0reverse_frame_3 - 0.063 13.3 0.0 0.077 13.0 0.0 1.2 1 0 0 1 1 1 0 Male gamete fusion factor DUF1196 PF06709.11 NODE_83165_length_191_cov_1.615385_g75224_i0forward_frame_2 - 0.072 13.2 0.1 0.14 12.3 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1196) zinc_ribbon_16 PF17034.5 NODE_83162_length_191_cov_1.641026_g75221_i0reverse_frame_3 - 0.016 15.4 0.3 0.018 15.3 0.3 1.0 1 0 0 1 1 1 0 Zinc-ribbon like family PqqA PF08042.11 NODE_83162_length_191_cov_1.641026_g75221_i0reverse_frame_3 - 0.11 12.5 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 PqqA family KTI12 PF08433.10 NODE_83157_length_191_cov_1.666667_g75216_i0reverse_frame_2 - 0.075 12.5 0.1 0.075 12.5 0.1 1.0 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DUF3128 PF11326.8 NODE_83157_length_191_cov_1.666667_g75216_i0forward_frame_2 - 0.22 11.9 6.8 0.26 11.7 6.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3128) DUF3658 PF12395.8 NODE_83156_length_191_cov_1.666667_g75215_i0forward_frame_3 - 0.078 12.9 0.0 0.08 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function PALP PF00291.25 NODE_83155_length_191_cov_1.679487_g75214_i0reverse_frame_3 - 1.4e-09 37.8 0.1 1.6e-09 37.6 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DUF4949 PF16307.5 NODE_83155_length_191_cov_1.679487_g75214_i0reverse_frame_3 - 0.069 13.3 0.1 0.076 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4949) Csm1_B PF18211.1 NODE_83155_length_191_cov_1.679487_g75214_i0reverse_frame_3 - 0.13 12.2 0.2 1.3 8.9 0.0 1.9 1 1 1 2 2 2 0 Csm1 subunit domain B Lamprin PF06403.11 NODE_83154_length_191_cov_1.692308_g75213_i0forward_frame_3 - 0.91 9.5 5.4 2 8.4 5.4 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_83154_length_191_cov_1.692308_g75213_i0forward_frame_2 - 0.14 12.1 4.2 0.17 11.9 4.2 1.2 1 0 0 1 1 1 0 Lamprin YqgC PF17430.2 NODE_83149_length_191_cov_1.717949_g75208_i0reverse_frame_2 - 0.6 10.2 3.4 0.96 9.6 3.4 1.3 1 0 0 1 1 1 0 Uncharacterized YqgC-like RVT_1 PF00078.27 NODE_83143_length_191_cov_1.737179_g75202_i0reverse_frame_3 - 5.1e-05 22.9 0.1 5.1e-05 22.9 0.1 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) MEIOC PF15189.6 NODE_83140_length_191_cov_1.743590_g75199_i0reverse_frame_2 - 0.025 14.2 0.0 0.026 14.1 0.0 1.0 1 0 0 1 1 1 0 Meiosis-specific coiled-coil domain-containing protein MEIOC zf-primase PF09329.11 NODE_83139_length_191_cov_1.750000_g75198_i0reverse_frame_3 - 0.012 15.4 0.3 0.026 14.3 0.1 1.7 1 1 1 2 2 2 0 Primase zinc finger NinG PF05766.12 NODE_83136_length_191_cov_1.762821_g75195_i0forward_frame_3 - 0.014 15.3 0.8 0.014 15.3 0.8 1.0 1 0 0 1 1 1 0 Bacteriophage Lambda NinG protein TilS PF09179.11 NODE_83133_length_191_cov_1.775641_g75192_i0reverse_frame_2 - 0.19 12.3 7.7 0.23 12.0 7.7 1.3 1 1 0 1 1 1 0 TilS substrate binding domain PhoLip_ATPase_N PF16209.5 NODE_83131_length_191_cov_1.782051_g75190_i0reverse_frame_3 - 0.013 15.2 0.2 0.016 14.9 0.2 1.2 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal Chordopox_L2 PF05803.12 NODE_83131_length_191_cov_1.782051_g75190_i0reverse_frame_3 - 0.051 13.4 0.2 0.057 13.3 0.2 1.1 1 0 0 1 1 1 0 Chordopoxvirus L2 protein DUF2417 PF10329.9 NODE_83127_length_191_cov_1.788462_g75186_i0forward_frame_3 - 2 7.8 6.1 2.2 7.6 6.1 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Transposase_28 PF04195.12 NODE_83126_length_191_cov_1.788462_g75185_i0reverse_frame_2 - 0.0065 16.7 1.2 0.0078 16.4 1.2 1.2 1 0 0 1 1 1 1 Putative gypsy type transposon Trehalase PF01204.18 NODE_83124_length_191_cov_1.820513_g75183_i0reverse_frame_2 - 0.17 10.7 0.7 0.2 10.4 0.7 1.0 1 0 0 1 1 1 0 Trehalase Arm-DNA-bind_3 PF13356.6 NODE_83122_length_191_cov_1.852564_g75181_i0forward_frame_2 - 0.2 12.0 3.2 0.32 11.4 3.2 1.5 1 1 0 1 1 1 0 Arm DNA-binding domain Paf1 PF03985.13 NODE_83121_length_191_cov_1.871795_g75180_i0forward_frame_2 - 0.24 10.4 0.0 0.24 10.4 0.0 1.0 1 0 0 1 1 1 0 Paf1 Pur_ac_phosph_N PF16656.5 NODE_83117_length_191_cov_1.929487_g75176_i0reverse_frame_3 - 0.013 16.1 0.0 0.013 16.1 0.0 1.1 1 0 0 1 1 1 0 Purple acid Phosphatase, N-terminal domain fn3 PF00041.21 NODE_83117_length_191_cov_1.929487_g75176_i0reverse_frame_3 - 0.05 13.9 0.0 0.055 13.8 0.0 1.2 1 0 0 1 1 1 0 Fibronectin type III domain PA14 PF07691.12 NODE_83116_length_191_cov_1.935897_g75175_i0forward_frame_3 - 0.12 12.2 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 PA14 domain DpnI PF06044.12 NODE_83116_length_191_cov_1.935897_g75175_i0forward_frame_2 - 5.6 6.6 8.9 6.1 6.4 8.9 1.2 1 0 0 1 1 1 0 Dam-replacing family PCIF1_WW PF12237.8 NODE_83114_length_191_cov_1.942308_g75173_i0forward_frame_3 - 0.14 11.8 0.0 0.14 11.7 0.0 1.0 1 0 0 1 1 1 0 Phosphorylated CTD interacting factor 1 WW domain Metallothio_5 PF02067.15 NODE_83113_length_191_cov_1.942308_g75172_i0reverse_frame_2 - 0.29 11.3 17.1 0.4 10.9 17.1 1.2 1 0 0 1 1 1 0 Metallothionein family 5 DUF5576 PF17739.1 NODE_83111_length_191_cov_1.961538_g75170_i0forward_frame_3 - 0.023 14.8 0.2 0.024 14.8 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5576) Caudo_TAP PF02413.17 NODE_83111_length_191_cov_1.961538_g75170_i0forward_frame_2 - 2.4e-07 30.9 0.0 2.6e-07 30.8 0.0 1.0 1 0 0 1 1 1 1 Caudovirales tail fibre assembly protein, lambda gpK # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks434.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks434.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks434.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks434.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:40:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5319 PF17252.2 NODE_83110_length_191_cov_1.961538_g75169_i0forward_frame_3 - 0.2 11.9 0.1 0.22 11.8 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5319) CSRNP_N PF16019.5 NODE_83105_length_191_cov_1.987179_g75164_i0forward_frame_2 - 0.1 12.5 2.1 0.12 12.2 2.1 1.1 1 0 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus Herpes_ori_bp PF02399.15 NODE_83095_length_191_cov_2.038462_g75154_i0forward_frame_3 - 0.15 10.1 0.0 0.16 10.0 0.0 1.0 1 0 0 1 1 1 0 Origin of replication binding protein GSu_C4xC__C2xCH PF09698.10 NODE_83094_length_191_cov_2.038462_g75153_i0reverse_frame_3 - 0.54 11.1 4.9 1.5 9.7 4.9 1.9 1 1 0 1 1 1 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) Endothelin PF00322.17 NODE_83089_length_191_cov_2.044872_g75148_i0reverse_frame_2 - 0.039 13.6 0.0 0.058 13.0 0.0 1.2 1 0 0 1 1 1 0 Endothelin family DUF1163 PF06651.11 NODE_83089_length_191_cov_2.044872_g75148_i0forward_frame_3 - 0.023 14.8 0.2 0.027 14.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1163) PPR_2 PF13041.6 NODE_83087_length_191_cov_2.051282_g75146_i0reverse_frame_3 - 0.0019 18.3 0.0 0.0078 16.4 0.0 1.8 2 0 0 2 2 2 1 PPR repeat family PPR_3 PF13812.6 NODE_83087_length_191_cov_2.051282_g75146_i0reverse_frame_3 - 0.076 13.1 0.0 0.2 11.7 0.0 1.7 1 1 1 2 2 2 0 Pentatricopeptide repeat domain Phospholamban PF04272.14 NODE_83086_length_191_cov_2.051282_g75145_i0reverse_frame_2 - 0.33 10.4 4.4 0.47 10.0 4.4 1.2 1 0 0 1 1 1 0 Phospholamban WD40 PF00400.32 NODE_83086_length_191_cov_2.051282_g75145_i0forward_frame_3 - 0.0019 19.0 0.5 0.0079 17.0 0.2 1.9 2 0 0 2 2 2 1 WD domain, G-beta repeat Nup160 PF11715.8 NODE_83086_length_191_cov_2.051282_g75145_i0forward_frame_3 - 0.0031 16.2 0.0 0.0033 16.1 0.0 1.0 1 0 0 1 1 1 1 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 NODE_83086_length_191_cov_2.051282_g75145_i0forward_frame_3 - 0.04 12.9 0.0 0.041 12.8 0.0 1.0 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein v110 PF01639.17 NODE_83086_length_191_cov_2.051282_g75145_i0forward_frame_3 - 0.074 12.9 0.2 0.075 12.9 0.2 1.1 1 0 0 1 1 1 0 Viral family 110 DUF1347 PF07079.11 NODE_83084_length_191_cov_2.051282_g75143_i0reverse_frame_2 - 0.00038 19.2 0.2 0.00043 19.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1347) DUF1816 PF08846.10 NODE_83077_length_191_cov_2.096154_g75136_i0reverse_frame_2 - 0.36 10.9 5.4 0.9 9.6 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1816) Toxin_22 PF08092.11 NODE_83076_length_191_cov_2.096154_g75135_i0reverse_frame_2 - 0.078 13.0 0.2 0.13 12.3 0.2 1.3 1 0 0 1 1 1 0 Magi peptide toxin family Radical_SAM PF04055.21 NODE_83072_length_191_cov_2.115385_g75131_i0reverse_frame_2 - 0.002 18.5 0.0 0.002 18.5 0.0 1.1 1 0 0 1 1 1 1 Radical SAM superfamily DUF5554 PF17709.1 NODE_83070_length_191_cov_2.147436_g75129_i0forward_frame_2 - 0.025 14.7 0.1 0.029 14.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5554) DUF4049 PF13258.6 NODE_83067_length_191_cov_2.173077_g75126_i0reverse_frame_2 - 2.3e-19 69.7 1.9 2.4e-19 69.6 1.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4049) WSK PF03832.13 NODE_83066_length_191_cov_2.198718_g75125_i0forward_frame_3 - 0.19 11.5 1.0 0.38 10.5 0.2 1.8 2 0 0 2 2 2 0 WSK motif WW PF00397.26 NODE_83065_length_191_cov_2.217949_g75124_i0forward_frame_2 - 2.6e-06 27.4 0.2 3.8e-06 26.9 0.2 1.3 1 0 0 1 1 1 1 WW domain UME PF08064.13 NODE_83063_length_191_cov_2.230769_g75122_i0forward_frame_3 - 0.13 12.2 0.1 0.28 11.1 0.1 1.5 1 1 1 2 2 2 0 UME (NUC010) domain Cytomega_gL PF01801.16 NODE_83062_length_191_cov_2.237179_g75121_i0reverse_frame_3 - 0.065 12.6 0.0 0.069 12.5 0.0 1.0 1 0 0 1 1 1 0 Cytomegalovirus glycoprotein L CDC4_D PF16856.5 NODE_83054_length_191_cov_2.307692_g75113_i0reverse_frame_3 - 0.033 14.1 0.6 0.05 13.5 0.5 1.4 1 1 0 1 1 1 0 Cell division control protein 4 dimerisation domain DASH_Dad1 PF08649.10 NODE_83052_length_191_cov_2.320513_g75111_i0reverse_frame_2 - 0.027 14.7 2.2 0.1 12.8 0.3 2.0 1 1 1 2 2 2 0 DASH complex subunit Dad1 Cpn60_TCP1 PF00118.24 NODE_83051_length_191_cov_2.339744_g75110_i0reverse_frame_3 - 0.00016 20.5 0.0 0.00017 20.4 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family UvrB_inter PF17757.1 NODE_83051_length_191_cov_2.339744_g75110_i0reverse_frame_3 - 0.01 16.0 0.0 0.011 15.9 0.0 1.1 1 0 0 1 1 1 1 UvrB interaction domain KH_5 PF13184.6 NODE_83051_length_191_cov_2.339744_g75110_i0reverse_frame_3 - 0.011 15.8 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 0 NusA-like KH domain MP PF01107.18 NODE_83048_length_191_cov_2.371795_g75107_i0reverse_frame_3 - 0.066 12.8 0.0 0.077 12.5 0.0 1.0 1 0 0 1 1 1 0 Viral movement protein (MP) HEPN_AbiA_CTD PF18732.1 NODE_83048_length_191_cov_2.371795_g75107_i0reverse_frame_2 - 0.23 11.4 4.5 0.26 11.2 4.5 1.1 1 0 0 1 1 1 0 HEPN like, Abia C-terminal domain Ribos_L4_asso_C PF14374.6 NODE_83048_length_191_cov_2.371795_g75107_i0forward_frame_2 - 0.053 13.6 0.5 0.063 13.3 0.5 1.1 1 0 0 1 1 1 0 60S ribosomal protein L4 C-terminal domain DUF2946 PF11162.8 NODE_83047_length_191_cov_2.397436_g75106_i0reverse_frame_3 - 0.17 12.6 4.1 0.19 12.4 4.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) Phospholamban PF04272.14 NODE_83046_length_191_cov_2.423077_g75105_i0reverse_frame_3 - 0.088 12.3 0.9 0.11 11.9 0.9 1.2 1 0 0 1 1 1 0 Phospholamban AIMP2_LysRS_bd PF16780.5 NODE_83045_length_191_cov_2.448718_g75104_i0reverse_frame_3 - 0.59 9.9 2.3 6.2 6.6 0.5 2.1 1 1 1 2 2 2 0 AIMP2 lysyl-tRNA synthetase binding domain F-box-like PF12937.7 NODE_83045_length_191_cov_2.448718_g75104_i0forward_frame_2 - 0.098 12.6 2.4 0.17 11.8 2.4 1.5 1 1 0 1 1 1 0 F-box-like HAP1_N PF04849.13 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.00052 19.3 3.7 0.00057 19.2 3.7 1.0 1 0 0 1 1 1 1 HAP1 N-terminal conserved region Enkurin PF13864.6 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.037 14.5 4.0 0.048 14.1 4.0 1.1 1 0 0 1 1 1 0 Calmodulin-binding Seryl_tRNA_N PF02403.22 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.045 14.0 4.6 0.053 13.7 4.6 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain LPP PF04728.13 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.08 13.4 1.3 0.89 10.0 0.7 2.0 1 1 1 2 2 2 0 Lipoprotein leucine-zipper DivIC PF04977.15 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.19 11.5 3.6 0.24 11.2 3.6 1.3 1 0 0 1 1 1 0 Septum formation initiator FlaC_arch PF05377.11 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 0.33 11.4 5.9 4.1 7.9 5.9 2.1 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) bZIP_2 PF07716.15 NODE_83041_length_191_cov_2.519231_g75100_i0reverse_frame_2 - 1.1 9.4 5.3 1.7 8.8 2.2 2.0 1 1 1 2 2 2 0 Basic region leucine zipper ANAPC1 PF12859.7 NODE_83039_length_191_cov_2.551282_g75098_i0reverse_frame_3 - 9.1 6.8 12.8 9.8 6.7 12.8 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 zinc_ribbon_2 PF13240.6 NODE_83038_length_191_cov_2.557692_g75097_i0forward_frame_2 - 0.11 12.3 7.4 1.4 8.8 0.7 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 NODE_83038_length_191_cov_2.557692_g75097_i0forward_frame_2 - 0.18 11.3 2.9 3.4 7.2 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain T3SSipB PF16535.5 NODE_83037_length_191_cov_2.557692_g75096_i0forward_frame_3 - 0.089 13.3 0.0 0.092 13.2 0.0 1.1 1 0 0 1 1 1 0 Type III cell invasion protein SipB Fer4 PF00037.27 NODE_83030_length_191_cov_2.698718_g75089_i0forward_frame_3 - 2.3 8.2 5.6 0.52 10.2 2.5 1.5 2 0 0 2 2 2 0 4Fe-4S binding domain HTH_IclR PF09339.10 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 2.1e-09 37.1 1.0 2.5e-09 36.8 1.0 1.1 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_28 PF13518.6 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 0.018 15.2 0.0 0.026 14.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 0.037 13.6 0.0 0.046 13.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 0.084 12.8 0.0 0.1 12.6 0.0 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain GYR PF02756.14 NODE_83029_length_191_cov_2.737179_g75088_i0reverse_frame_3 - 0.42 10.4 2.8 2.9 7.7 0.0 2.2 2 0 0 2 2 2 0 GYR motif KIAA1430 PF13879.6 NODE_83028_length_191_cov_2.737179_g75087_i0reverse_frame_2 - 1.5e-05 25.7 0.1 1.7e-05 25.5 0.1 1.1 1 0 0 1 1 1 1 KIAA1430 homologue Lamprin PF06403.11 NODE_83021_length_191_cov_2.891026_g75080_i0forward_frame_2 - 0.015 15.3 0.7 0.017 15.1 0.7 1.1 1 0 0 1 1 1 0 Lamprin Transthyretin PF00576.21 NODE_83019_length_191_cov_2.923077_g75078_i0reverse_frame_2 - 2e-19 70.3 1.1 2.3e-19 70.1 1.1 1.0 1 0 0 1 1 1 1 HIUase/Transthyretin family DUF241 PF03087.14 NODE_83017_length_191_cov_3.006410_g75076_i0forward_frame_2 - 0.21 11.4 0.0 0.23 11.3 0.0 1.0 1 0 0 1 1 1 0 Arabidopsis protein of unknown function NiFe-hyd_HybE PF11939.8 NODE_83016_length_191_cov_3.025641_g75075_i0forward_frame_3 - 3.4e-12 46.5 0.0 3.5e-12 46.5 0.0 1.0 1 0 0 1 1 1 1 [NiFe]-hydrogenase assembly, chaperone, HybE PIR PF00399.19 NODE_83015_length_191_cov_3.032051_g75074_i0forward_frame_3 - 0.43 10.2 4.3 0.97 9.1 4.3 1.6 1 0 0 1 1 1 0 Yeast PIR protein repeat DUF3989 PF13150.6 NODE_83013_length_191_cov_3.051282_g75072_i0reverse_frame_3 - 0.14 11.9 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) LAL_C2 PF18603.1 NODE_83012_length_191_cov_3.179487_g75071_i0forward_frame_3 - 0.028 14.6 0.1 0.037 14.2 0.1 1.2 1 0 0 1 1 1 0 L-amino acid ligase C-terminal domain 2 DUF3377 PF11857.8 NODE_83006_length_191_cov_3.621795_g75065_i0forward_frame_2 - 0.0067 16.3 0.9 0.0084 16.0 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3377) DUF3481 PF11980.8 NODE_82999_length_191_cov_6.025641_g75058_i0forward_frame_3 - 0.1 12.3 1.2 0.11 12.2 1.2 1.1 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein PIP49_C PF12260.8 NODE_82996_length_191_cov_10.487179_g75055_i0reverse_frame_3 - 0.059 13.0 0.0 0.063 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 NBD94 PF16830.5 NODE_82996_length_191_cov_10.487179_g75055_i0reverse_frame_2 - 0.013 15.9 0.2 0.015 15.7 0.2 1.1 1 0 0 1 1 1 0 Nucleotide-Binding Domain 94 of RH SR-25 PF10500.9 NODE_82990_length_191_cov_18.250000_g75049_i0forward_frame_2 - 0.05 13.2 16.8 0.055 13.1 16.8 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein ArgoL1 PF08699.10 NODE_82987_length_191_cov_24.903846_g75046_i0reverse_frame_3 - 0.087 12.5 0.0 0.26 11.0 0.0 1.8 1 1 0 1 1 1 0 Argonaute linker 1 domain NADH-G_4Fe-4S_3 PF10588.9 NODE_82981_length_191_cov_28.910256_g75040_i0reverse_frame_3 - 0.024 14.2 1.1 0.034 13.7 1.1 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF5090 PF17009.5 NODE_82979_length_191_cov_29.987179_g75038_i0reverse_frame_3 - 8.3 6.3 17.0 9.4 6.2 17.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DNAPolymera_Pol PF11590.8 NODE_82974_length_191_cov_34.474359_g75033_i0reverse_frame_3 - 0.085 12.8 0.3 0.16 11.9 0.3 1.4 1 0 0 1 1 1 0 DNA polymerase catalytic subunit Pol DUF480 PF04337.12 NODE_82973_length_191_cov_37.788462_g75032_i0forward_frame_2 - 0.04 14.0 0.0 0.043 13.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF480 WBP-1 PF11669.8 NODE_82971_length_191_cov_39.557692_g75030_i0forward_frame_2 - 0.084 13.5 0.1 0.098 13.3 0.1 1.0 1 0 0 1 1 1 0 WW domain-binding protein 1 Guanylin PF02058.15 NODE_82970_length_191_cov_39.602564_g75029_i0reverse_frame_2 - 0.11 13.0 0.3 0.14 12.7 0.3 1.2 1 1 0 1 1 1 0 Guanylin precursor DiSB-ORF2_chro PF16506.5 NODE_82969_length_191_cov_40.480769_g75028_i0forward_frame_3 - 0.012 15.6 0.4 0.018 15.0 0.4 1.3 1 0 0 1 1 1 0 Putative virion glycoprotein of insect viruses DUF2630 PF10944.8 NODE_82966_length_191_cov_45.794872_g75025_i0reverse_frame_2 - 0.089 13.3 0.0 0.1 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2630) PGA2 PF07543.12 NODE_82964_length_191_cov_48.256410_g75023_i0reverse_frame_2 - 1.2 9.1 16.1 1.4 8.9 16.1 1.1 1 0 0 1 1 1 0 Protein trafficking PGA2 PBP1_TM PF14812.6 NODE_82964_length_191_cov_48.256410_g75023_i0reverse_frame_2 - 2.6 8.5 18.8 3.1 8.2 18.8 1.1 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Pox_Ag35 PF03286.14 NODE_82964_length_191_cov_48.256410_g75023_i0reverse_frame_2 - 7.6 6.3 21.2 8.6 6.1 21.2 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF3381 PF11861.8 NODE_82964_length_191_cov_48.256410_g75023_i0reverse_frame_2 - 7.9 6.3 23.3 8.5 6.2 23.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) VIT1 PF01988.19 NODE_82964_length_191_cov_48.256410_g75023_i0forward_frame_2 - 0.36 10.7 10.1 0.34 10.7 10.1 1.0 1 0 0 1 1 1 0 VIT family XFP_N PF09364.10 NODE_82951_length_191_cov_65.679487_g75010_i0reverse_frame_2 - 0.076 11.8 0.0 0.077 11.8 0.0 1.0 1 0 0 1 1 1 0 XFP N-terminal domain P53 PF00870.18 NODE_82949_length_191_cov_70.717949_g75008_i0forward_frame_3 - 0.032 14.0 0.0 0.035 13.9 0.0 1.0 1 0 0 1 1 1 0 P53 DNA-binding domain Internalin_N PF12354.8 NODE_82946_length_191_cov_72.846154_g75005_i0forward_frame_3 - 4.5 7.4 5.4 5.2 7.2 2.5 2.3 1 1 1 2 2 2 0 Bacterial adhesion/invasion protein N terminal Ig_3 PF13927.6 NODE_82941_length_191_cov_79.032051_g75000_i0reverse_frame_2 - 0.062 13.9 0.3 0.065 13.8 0.3 1.2 1 0 0 1 1 1 0 Immunoglobulin domain MID_pPIWI_RE PF18157.1 NODE_82939_length_191_cov_87.801282_g74998_i0reverse_frame_3 - 0.1 12.9 0.1 0.11 12.8 0.1 1.1 1 0 0 1 1 1 0 MID domain of pPIWI_RE GATase PF00117.28 NODE_82930_length_191_cov_117.743590_g74989_i0reverse_frame_2 - 0.12 12.1 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferase class-I zf-ribbon_3 PF13248.6 NODE_82929_length_191_cov_125.429487_g74988_i0reverse_frame_3 - 0.069 12.6 0.4 0.11 12.0 0.4 1.2 1 0 0 1 1 1 0 zinc-ribbon domain zf-C2H2_11 PF16622.5 NODE_82928_length_191_cov_125.615385_g74987_i0reverse_frame_2 - 0.012 15.3 0.3 0.026 14.3 0.3 1.5 1 0 0 1 1 1 0 zinc-finger C2H2-type Methyltrans_Mon PF14314.6 NODE_82928_length_191_cov_125.615385_g74987_i0forward_frame_3 - 0.035 12.2 0.0 0.038 12.0 0.0 1.0 1 0 0 1 1 1 0 Virus-capping methyltransferase Zfx_Zfy_act PF04704.13 NODE_82927_length_191_cov_126.519231_g74986_i0reverse_frame_3 - 0.15 11.2 0.2 0.14 11.2 0.2 1.0 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region zf-U1 PF06220.12 NODE_82927_length_191_cov_126.519231_g74986_i0reverse_frame_3 - 0.18 11.6 0.3 0.18 11.6 0.3 1.8 2 0 0 2 2 2 0 U1 zinc finger zf-CCCH_3 PF15663.5 NODE_82927_length_191_cov_126.519231_g74986_i0forward_frame_2 - 5 7.4 11.0 6 7.1 11.0 1.1 1 0 0 1 1 1 0 Zinc-finger containing family DcpS_C PF11969.8 NODE_82918_length_191_cov_168.384615_g74977_i0forward_frame_2 - 0.0082 16.6 0.1 0.0082 16.6 0.1 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding SH3_11 PF18103.1 NODE_82916_length_191_cov_179.128205_g74975_i0forward_frame_3 - 0.23 11.6 3.6 0.42 10.8 3.6 1.6 1 1 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain V1R PF03402.14 NODE_82914_length_191_cov_288.794872_g74973_i0forward_frame_2 - 0.036 13.7 1.4 0.039 13.6 1.4 1.0 1 0 0 1 1 1 0 Vomeronasal organ pheromone receptor family, V1R HRG PF16954.5 NODE_82911_length_191_cov_1313.448718_g74970_i0reverse_frame_2 - 0.083 13.3 5.3 0.082 13.3 5.3 1.2 1 1 0 1 1 1 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene UL41A PF17591.2 NODE_82911_length_191_cov_1313.448718_g74970_i0reverse_frame_2 - 1.4 9.1 5.2 1.6 8.9 5.1 1.4 1 1 0 1 1 1 0 Herpesvirus UL41A DHFR_2 PF06442.11 NODE_82902_length_192_cov_0.847134_g74961_i0reverse_frame_3 - 0.13 12.1 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 R67 dihydrofolate reductase E1_dh PF00676.20 NODE_82901_length_192_cov_0.898089_g74960_i0reverse_frame_2 - 5.5e-09 35.4 0.1 5.5e-09 35.4 0.1 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component CD99L2 PF12301.8 NODE_82900_length_192_cov_0.904459_g74959_i0reverse_frame_2 - 0.9 9.8 5.1 1.1 9.6 5.1 1.1 1 0 0 1 1 1 0 CD99 antigen like protein 2 Colipase PF01114.18 NODE_82900_length_192_cov_0.904459_g74959_i0forward_frame_3 - 0.051 13.2 0.3 0.086 12.5 0.3 1.4 1 0 0 1 1 1 0 Colipase, N-terminal domain SPC25 PF06703.11 NODE_82898_length_192_cov_0.929936_g74957_i0forward_frame_3 - 1.2 8.9 4.8 1.3 8.8 4.8 1.0 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Holin_SPP1 PF04688.13 NODE_82897_length_192_cov_0.936306_g74956_i0forward_frame_3 - 0.079 13.1 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 SPP1 phage holin MSA_2 PF00985.17 NODE_82897_length_192_cov_0.936306_g74956_i0forward_frame_2 - 0.19 12.1 0.2 0.2 12.0 0.2 1.2 1 0 0 1 1 1 0 Merozoite Surface Antigen 2 (MSA-2) family Chi-conotoxin PF16981.5 NODE_82893_length_192_cov_0.968153_g74952_i0forward_frame_2 - 0.063 13.5 0.1 0.12 12.7 0.1 1.4 1 0 0 1 1 1 0 chi-Conotoxin or t superfamily Rubella_Capsid PF05750.11 NODE_82890_length_192_cov_1.006369_g74949_i0reverse_frame_3 - 0.36 10.4 3.7 0.38 10.3 3.7 1.0 1 0 0 1 1 1 0 Rubella capsid protein Bombinin PF05298.11 NODE_82890_length_192_cov_1.006369_g74949_i0reverse_frame_2 - 0.12 12.1 0.2 0.12 12.0 0.2 1.1 1 0 0 1 1 1 0 Bombinin Kinesin PF00225.23 NODE_82888_length_192_cov_1.006369_g74947_i0reverse_frame_2 - 4.2e-06 25.9 0.1 4.3e-06 25.9 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_82888_length_192_cov_1.006369_g74947_i0reverse_frame_2 - 0.0012 18.9 0.0 0.0012 18.8 0.0 1.1 1 0 0 1 1 1 1 Microtubule binding Sir1 PF11603.8 NODE_82888_length_192_cov_1.006369_g74947_i0reverse_frame_2 - 0.0065 17.0 0.1 0.0072 16.8 0.1 1.1 1 0 0 1 1 1 1 Regulatory protein Sir1 MSA-2c PF12238.8 NODE_82884_length_192_cov_1.006369_g74943_i0reverse_frame_3 - 1.1 9.3 2.9 1.1 9.2 2.9 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c Lamprin PF06403.11 NODE_82884_length_192_cov_1.006369_g74943_i0forward_frame_3 - 0.016 15.1 1.4 0.016 15.1 1.4 1.2 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_82884_length_192_cov_1.006369_g74943_i0forward_frame_2 - 0.027 14.4 4.0 0.028 14.4 3.4 1.3 1 1 0 1 1 1 0 Lamprin eIF2_C PF09173.11 NODE_82879_length_192_cov_1.012739_g74938_i0reverse_frame_2 - 0.051 13.8 0.0 0.059 13.6 0.0 1.1 1 0 0 1 1 1 0 Initiation factor eIF2 gamma, C terminal ThaI PF15514.6 NODE_82875_length_192_cov_1.012739_g74934_i0reverse_frame_3 - 0.075 12.7 0.0 0.088 12.4 0.0 1.0 1 0 0 1 1 1 0 Restriction endonuclease ThaI ERbeta_N PF12497.8 NODE_82874_length_192_cov_1.012739_g74933_i0forward_frame_2 - 0.047 13.5 0.4 0.11 12.3 0.1 1.6 1 1 1 2 2 2 0 Estrogen receptor beta SipA_VBS PF17985.1 NODE_82870_length_192_cov_1.012739_g74929_i0reverse_frame_3 - 2.4 8.2 6.5 4.3 7.4 1.3 2.3 2 0 0 2 2 2 0 SipA vinculin binding site YpzI PF14140.6 NODE_82870_length_192_cov_1.012739_g74929_i0forward_frame_2 - 0.051 13.4 0.1 0.1 12.4 0.1 1.6 1 0 0 1 1 1 0 YpzI-like protein DUF2053 PF09767.9 NODE_82865_length_192_cov_1.012739_g74924_i0forward_frame_2 - 0.088 12.9 0.3 0.094 12.9 0.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2053) DUF5431 PF17496.2 NODE_82864_length_192_cov_1.012739_g74923_i0reverse_frame_3 - 0.044 13.9 0.2 0.057 13.6 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5431) DUF4133 PF13571.6 NODE_82862_length_192_cov_1.019108_g74921_i0forward_frame_3 - 0.81 10.1 3.2 0.89 9.9 3.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) DUF1289 PF06945.13 NODE_82861_length_192_cov_1.019108_g74920_i0reverse_frame_3 - 0.0097 15.7 1.2 0.018 14.9 1.2 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1289) NPH-II PF12011.8 NODE_82857_length_192_cov_1.019108_g74916_i0reverse_frame_2 - 0.083 12.8 0.0 0.085 12.7 0.0 1.1 1 0 0 1 1 1 0 RNA helicase NPH-II Exo_endo_phos PF03372.23 NODE_82853_length_192_cov_1.019108_g74912_i0reverse_frame_2 - 0.011 15.3 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 NODE_82853_length_192_cov_1.019108_g74912_i0reverse_frame_2 - 0.11 12.4 0.0 0.12 12.2 0.0 1.3 1 1 0 1 1 1 0 Endonuclease-reverse transcriptase PMG PF05287.12 NODE_82853_length_192_cov_1.019108_g74912_i0forward_frame_2 - 0.01 15.9 2.4 0.01 15.8 2.4 1.1 1 0 0 1 1 1 1 PMG protein zf-ISL3 PF14690.6 NODE_82848_length_192_cov_1.019108_g74907_i0reverse_frame_2 - 0.063 14.0 5.6 0.086 13.5 5.6 1.2 1 0 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF3439 PF11921.8 NODE_82840_length_192_cov_1.019108_g74899_i0reverse_frame_3 - 0.045 13.7 1.2 0.046 13.7 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) FtsL PF04999.13 NODE_82840_length_192_cov_1.019108_g74899_i0forward_frame_3 - 0.014 15.4 0.1 0.015 15.3 0.1 1.0 1 0 0 1 1 1 0 Cell division protein FtsL EphA2_TM PF14575.6 NODE_82840_length_192_cov_1.019108_g74899_i0forward_frame_3 - 0.16 12.9 0.7 0.19 12.6 0.7 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Agglutinin_C PF18021.1 NODE_82838_length_192_cov_1.019108_g74897_i0forward_frame_3 - 0.093 13.3 0.0 0.1 13.1 0.0 1.1 1 0 0 1 1 1 0 Agglutinin C-terminal DUF680 PF05079.12 NODE_82837_length_192_cov_1.019108_g74896_i0forward_frame_2 - 0.079 13.7 0.0 0.11 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF680) SH3_5 PF08460.10 NODE_82835_length_192_cov_1.019108_g74894_i0reverse_frame_3 - 0.19 11.9 0.0 0.26 11.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial SH3 domain Zn_Tnp_IS1595 PF12760.7 NODE_82830_length_192_cov_1.019108_g74889_i0reverse_frame_3 - 0.021 14.8 0.3 0.027 14.4 0.3 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Filo_glycop PF01611.16 NODE_82829_length_192_cov_1.019108_g74888_i0reverse_frame_2 - 0.089 11.7 0.0 0.089 11.7 0.0 1.1 1 0 0 1 1 1 0 Filovirus glycoprotein DUF2418 PF10332.9 NODE_82816_length_192_cov_1.019108_g74875_i0reverse_frame_2 - 0.08 13.5 1.0 0.094 13.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) YdjM PF04307.14 NODE_82815_length_192_cov_1.019108_g74874_i0forward_frame_2 - 0.19 11.0 0.0 0.19 11.0 0.0 1.0 1 0 0 1 1 1 0 LexA-binding, inner membrane-associated putative hydrolase MyTH4 PF00784.17 NODE_82813_length_192_cov_1.070064_g74872_i0forward_frame_3 - 0.025 15.0 0.7 0.027 14.9 0.7 1.2 1 0 0 1 1 1 0 MyTH4 domain DUF1732 PF08340.11 NODE_82813_length_192_cov_1.070064_g74872_i0forward_frame_2 - 0.1 12.6 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1732) zf-RVT PF13966.6 NODE_82810_length_192_cov_1.082803_g74869_i0reverse_frame_2 - 0.063 14.0 2.6 0.069 13.9 2.6 1.1 1 0 0 1 1 1 0 zinc-binding in reverse transcriptase PhoLip_ATPase_N PF16209.5 NODE_82810_length_192_cov_1.082803_g74869_i0forward_frame_3 - 0.029 14.0 0.4 0.032 13.9 0.4 1.1 1 0 0 1 1 1 0 Phospholipid-translocating ATPase N-terminal DUF3270 PF11674.8 NODE_82810_length_192_cov_1.082803_g74869_i0forward_frame_3 - 0.031 14.5 0.3 0.034 14.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) zf-FLZ PF04570.14 NODE_82810_length_192_cov_1.082803_g74869_i0forward_frame_2 - 0.00029 20.2 2.5 0.00052 19.4 2.5 1.4 1 0 0 1 1 1 1 zinc-finger of the FCS-type, C2-C2 DUF3446 PF11928.8 NODE_82808_length_192_cov_1.101911_g74867_i0forward_frame_3 - 0.081 13.2 10.6 0.098 13.0 10.6 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain X PF00739.19 NODE_82808_length_192_cov_1.101911_g74867_i0forward_frame_3 - 0.34 11.0 3.0 0.39 10.8 3.0 1.1 1 0 0 1 1 1 0 Trans-activation protein X Herpes_pp85 PF04637.12 NODE_82808_length_192_cov_1.101911_g74867_i0forward_frame_3 - 5.7 5.2 5.6 5.8 5.2 5.6 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Cytochrome_C7 PF14522.6 NODE_82806_length_192_cov_1.108280_g74865_i0reverse_frame_2 - 0.052 13.6 0.0 0.058 13.4 0.0 1.1 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c Herpes_UL36 PF03586.13 NODE_82802_length_192_cov_1.140127_g74861_i0reverse_frame_3 - 0.058 12.7 0.0 0.066 12.5 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL36 tegument protein Rsm1 PF08600.10 NODE_82801_length_192_cov_1.140127_g74860_i0forward_frame_2 - 0.083 13.0 0.4 0.11 12.7 0.4 1.2 1 0 0 1 1 1 0 Rsm1-like ATE_N PF04376.13 NODE_82800_length_192_cov_1.146497_g74859_i0reverse_frame_3 - 1.6e-12 47.6 0.2 1.9e-12 47.4 0.2 1.1 1 0 0 1 1 1 1 Arginine-tRNA-protein transferase, N terminus DUF836 PF05768.14 NODE_82800_length_192_cov_1.146497_g74859_i0reverse_frame_2 - 0.0043 17.4 0.2 0.0053 17.2 0.2 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Hpt PF01627.23 NODE_82799_length_192_cov_1.146497_g74858_i0reverse_frame_3 - 0.062 13.6 0.1 0.074 13.3 0.1 1.1 1 0 0 1 1 1 0 Hpt domain zf-CCHC PF00098.23 NODE_82798_length_192_cov_1.152866_g74857_i0reverse_frame_2 - 0.0032 17.5 1.3 0.0047 16.9 1.3 1.3 1 0 0 1 1 1 1 Zinc knuckle AMA-1 PF02430.15 NODE_82797_length_192_cov_1.152866_g74856_i0reverse_frame_2 - 0.0079 15.2 2.2 0.0084 15.1 2.2 1.0 1 0 0 1 1 1 1 Apical membrane antigen 1 Phi-29_GP16_7 PF06720.11 NODE_82794_length_192_cov_1.165605_g74853_i0reverse_frame_2 - 0.11 12.3 0.0 0.12 12.2 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 Somatostatin PF03002.15 NODE_82791_length_192_cov_1.171975_g74850_i0reverse_frame_3 - 0.045 13.7 1.8 0.064 13.2 0.1 2.0 2 0 0 2 2 2 0 Somatostatin/Cortistatin family BacteriocIIc_cy PF12173.8 NODE_82790_length_192_cov_1.171975_g74849_i0reverse_frame_2 - 0.0095 16.2 0.7 0.011 16.0 0.7 1.1 1 0 0 1 1 1 1 Bacteriocin class IIc cyclic gassericin A-like Lar_restr_allev PF14354.6 NODE_82789_length_192_cov_1.178344_g74848_i0reverse_frame_3 - 0.11 12.8 3.5 0.14 12.5 3.5 1.1 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-Di19 PF05605.12 NODE_82789_length_192_cov_1.178344_g74848_i0reverse_frame_3 - 1.8 8.9 8.2 15 6.0 8.2 2.0 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding ATP-synt_C PF00137.21 NODE_82787_length_192_cov_1.197452_g74846_i0forward_frame_3 - 0.013 15.8 3.3 0.017 15.5 3.3 1.1 1 0 0 1 1 1 0 ATP synthase subunit C SecE PF00584.20 NODE_82787_length_192_cov_1.197452_g74846_i0forward_frame_3 - 3.7 7.6 8.4 0.78 9.7 2.6 2.0 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex Phage_BR0599 PF09356.10 NODE_82787_length_192_cov_1.197452_g74846_i0forward_frame_2 - 0.0054 17.0 0.1 0.0062 16.8 0.1 1.1 1 0 0 1 1 1 1 Phage conserved hypothetical protein BR0599 Baculo_19 PF04798.12 NODE_82783_length_192_cov_1.248408_g74842_i0forward_frame_2 - 0.064 13.0 0.0 0.078 12.7 0.0 1.1 1 0 0 1 1 1 0 Baculovirus 19 kDa protein conserved region DEDD_Tnp_IS110 PF01548.17 NODE_82780_length_192_cov_1.267516_g74839_i0reverse_frame_3 - 4.6e-05 23.3 0.1 5.1e-05 23.2 0.1 1.0 1 0 0 1 1 1 1 Transposase Ten1_2 PF15490.6 NODE_82780_length_192_cov_1.267516_g74839_i0forward_frame_2 - 0.13 12.0 0.1 0.31 10.8 0.0 1.6 1 1 1 2 2 2 0 Telomere-capping, CST complex subunit Fer4_15 PF13459.6 NODE_82778_length_192_cov_1.267516_g74837_i0forward_frame_3 - 0.05 14.3 0.0 0.055 14.2 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S single cluster domain AGH PF17558.2 NODE_82774_length_192_cov_1.267516_g74833_i0reverse_frame_3 - 0.0029 17.7 0.3 0.0034 17.6 0.3 1.1 1 0 0 1 1 1 1 Androgenic gland hormone Kelch_3 PF13415.6 NODE_82772_length_192_cov_1.273885_g74831_i0reverse_frame_3 - 2.7 8.4 4.9 1.2 9.5 2.3 1.8 2 1 0 2 2 2 0 Galactose oxidase, central domain MatE PF01554.18 NODE_82770_length_192_cov_1.273885_g74829_i0forward_frame_2 - 0.0049 16.5 2.4 0.0053 16.4 2.4 1.0 1 0 0 1 1 1 1 MatE Frataxin_Cyay PF01491.16 NODE_82769_length_192_cov_1.273885_g74828_i0forward_frame_2 - 0.19 11.8 0.0 0.24 11.5 0.0 1.1 1 0 0 1 1 1 0 Frataxin-like domain Lectin_leg-like PF03388.13 NODE_82765_length_192_cov_1.273885_g74824_i0forward_frame_3 - 0.078 12.3 0.0 0.082 12.2 0.0 1.0 1 0 0 1 1 1 0 Legume-like lectin family DUF4808 PF16066.5 NODE_82764_length_192_cov_1.273885_g74823_i0reverse_frame_3 - 0.056 14.0 0.0 0.059 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4808) DUF2655 PF10848.8 NODE_82763_length_192_cov_1.273885_g74822_i0reverse_frame_2 - 0.025 14.9 0.1 0.028 14.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2655) Regulator_TrmB PF11495.8 NODE_82763_length_192_cov_1.273885_g74822_i0reverse_frame_2 - 0.11 11.6 0.2 0.13 11.4 0.2 1.0 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB Longin_2 PF18639.1 NODE_82759_length_192_cov_1.273885_g74818_i0reverse_frame_3 - 0.046 13.6 0.1 0.048 13.5 0.1 1.0 1 0 0 1 1 1 0 Yeast longin domain Plant_zn_clust PF10533.9 NODE_82758_length_192_cov_1.273885_g74817_i0reverse_frame_3 - 0.022 14.7 3.6 0.03 14.3 3.6 1.2 1 0 0 1 1 1 0 Plant zinc cluster domain DUF1356 PF07092.12 NODE_82758_length_192_cov_1.273885_g74817_i0reverse_frame_2 - 0.046 13.0 0.1 0.054 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) PID_2 PF14719.6 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_3 - 0.044 13.7 0.2 0.049 13.5 0.2 1.0 1 0 0 1 1 1 0 Phosphotyrosine interaction domain (PTB/PID) Relaxase PF03432.14 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.0053 16.4 1.6 0.0053 16.4 1.6 1.0 1 0 0 1 1 1 1 Relaxase/Mobilisation nuclease domain Tup_N PF08581.10 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.0073 16.6 0.5 0.0073 16.6 0.5 1.4 2 0 0 2 2 2 1 Tup N-terminal Phage_Mu_Gam PF07352.12 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.0088 16.0 1.6 0.011 15.7 1.6 1.1 1 0 0 1 1 1 1 Bacteriophage Mu Gam like protein Spc7 PF08317.11 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.029 13.3 4.0 0.03 13.2 4.0 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein CENP-K PF11802.8 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.056 13.0 4.3 0.058 13.0 4.3 1.0 1 0 0 1 1 1 0 Centromere-associated protein K DUF1664 PF07889.12 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.096 12.7 0.9 0.11 12.6 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2393 PF09624.10 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.17 11.9 0.1 0.19 11.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) eIF-4B PF06273.11 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 0.4 9.7 2.6 0.43 9.6 2.6 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Pox_A_type_inc PF04508.12 NODE_82757_length_192_cov_1.273885_g74816_i0forward_frame_2 - 2.4 8.2 5.9 5.8 6.9 1.0 2.8 2 1 0 2 2 2 0 Viral A-type inclusion protein repeat Viral_coat PF00729.18 NODE_82754_length_192_cov_1.312102_g74813_i0reverse_frame_3 - 0.089 12.6 0.0 0.089 12.6 0.0 1.0 1 0 0 1 1 1 0 Viral coat protein (S domain) EF-hand_5 PF13202.6 NODE_82752_length_192_cov_1.318471_g74811_i0forward_frame_2 - 0.15 11.6 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 EF hand Arena_ncap_C PF17290.2 NODE_82751_length_192_cov_1.318471_g74810_i0reverse_frame_2 - 0.12 11.7 0.9 0.12 11.7 0.9 1.0 1 0 0 1 1 1 0 Arenavirus nucleocapsid C-terminal domain DUF2701 PF10857.8 NODE_82747_length_192_cov_1.337580_g74806_i0forward_frame_3 - 0.12 12.4 2.0 0.19 11.8 2.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) Auto_anti-p27 PF06677.12 NODE_82746_length_192_cov_1.337580_g74805_i0reverse_frame_3 - 0.039 14.1 1.7 0.041 14.0 0.6 1.5 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) L27_N PF09060.10 NODE_82745_length_192_cov_1.337580_g74804_i0reverse_frame_2 - 0.066 13.3 0.2 0.1 12.6 0.2 1.3 1 0 0 1 1 1 0 L27_N zf-H2C2 PF09337.10 NODE_82742_length_192_cov_1.350318_g74801_i0forward_frame_3 - 0.035 14.3 0.0 0.052 13.8 0.0 1.2 1 0 0 1 1 1 0 H2C2 zinc finger Tk-SP_N-pro PF18237.1 NODE_82741_length_192_cov_1.356688_g74800_i0reverse_frame_3 - 0.018 15.1 0.8 0.023 14.7 0.6 1.3 1 1 0 1 1 1 0 Tk-SP N-propeptide domain Fer4_11 PF13247.6 NODE_82740_length_192_cov_1.363057_g74799_i0reverse_frame_3 - 0.037 14.1 0.3 0.04 14.0 0.3 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain Peptidase_C2 PF00648.21 NODE_82740_length_192_cov_1.363057_g74799_i0reverse_frame_2 - 8.3e-08 31.6 0.0 8.6e-08 31.5 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease HTH_6 PF01418.17 NODE_82739_length_192_cov_1.363057_g74798_i0reverse_frame_3 - 0.056 13.4 0.1 0.058 13.4 0.1 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family DUF1949 PF09186.11 NODE_82734_length_192_cov_1.407643_g74793_i0reverse_frame_3 - 0.19 11.6 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1949) IMS_C PF11799.8 NODE_82732_length_192_cov_1.407643_g74791_i0forward_frame_2 - 0.044 14.5 0.0 0.051 14.3 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family C-terminal domain Herpes_UL31 PF02718.14 NODE_82730_length_192_cov_1.420382_g74789_i0reverse_frame_2 - 0.63 9.0 3.2 0.68 8.9 3.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL31-like protein DUF562 PF04763.12 NODE_82727_length_192_cov_1.433121_g74786_i0reverse_frame_3 - 0.014 14.9 0.2 0.014 14.9 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF562) EI24 PF07264.11 NODE_82726_length_192_cov_1.433121_g74785_i0forward_frame_3 - 0.02 15.1 0.3 0.023 14.9 0.3 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) DUF2244 PF10003.9 NODE_82725_length_192_cov_1.439490_g74784_i0reverse_frame_3 - 0.22 11.2 1.0 0.26 10.9 1.0 1.0 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) Dickkopf_N PF04706.12 NODE_82719_length_192_cov_1.471338_g74778_i0reverse_frame_3 - 0.02 15.4 1.9 0.026 15.0 1.9 1.1 1 0 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region Fcf1 PF04900.12 NODE_82717_length_192_cov_1.471338_g74776_i0reverse_frame_3 - 0.071 13.5 0.4 0.071 13.5 0.4 1.4 1 1 1 2 2 2 0 Fcf1 Phosphonate-bd PF12974.7 NODE_82717_length_192_cov_1.471338_g74776_i0forward_frame_2 - 0.22 11.1 0.0 0.26 10.9 0.0 1.0 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks435.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks435.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks435.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks435.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Pyr_redox_2 PF07992.14 NODE_82706_length_192_cov_1.503185_g74765_i0reverse_frame_3 - 1.5e-12 47.4 0.1 1.6e-12 47.3 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Antimicrobial19 PF08225.11 NODE_82697_length_192_cov_1.515924_g74756_i0forward_frame_2 - 2.1 8.0 5.6 2.9 7.6 0.2 2.8 3 0 0 3 3 3 0 Pseudin antimicrobial peptide SecD_SecF PF02355.16 NODE_82695_length_192_cov_1.522293_g74754_i0reverse_frame_2 - 0.049 13.0 0.0 0.051 12.9 0.0 1.0 1 0 0 1 1 1 0 Protein export membrane protein Telomere_res PF16684.5 NODE_82691_length_192_cov_1.528662_g74750_i0forward_frame_3 - 0.084 12.3 0.7 0.083 12.4 0.7 1.1 1 0 0 1 1 1 0 Telomere resolvase DUF5121 PF17165.4 NODE_82690_length_192_cov_1.528662_g74749_i0forward_frame_3 - 0.026 15.0 1.0 0.029 14.8 1.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5121) Ac110_PIF PF07280.11 NODE_82686_length_192_cov_1.528662_g74745_i0forward_frame_3 - 1.2 9.0 6.1 0.14 11.9 2.0 1.8 2 0 0 2 2 2 0 Per os infectivity factor AC110 AcylCoA_dehyd_C PF12186.8 NODE_82685_length_192_cov_1.528662_g74744_i0reverse_frame_2 - 0.19 11.9 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase C terminal YusW PF14039.6 NODE_82685_length_192_cov_1.528662_g74744_i0forward_frame_2 - 0.018 15.5 0.2 1.8 9.1 0.0 2.0 1 1 1 2 2 2 0 YusW-like protein Lipoprotein_8 PF02030.15 NODE_82684_length_192_cov_1.528662_g74743_i0forward_frame_3 - 0.069 11.9 0.0 0.077 11.7 0.0 1.0 1 0 0 1 1 1 0 Hypothetical lipoprotein (MG045 family) Macscav_rec PF03523.13 NODE_82684_length_192_cov_1.528662_g74743_i0forward_frame_3 - 0.12 12.2 1.6 0.18 11.7 1.0 1.6 1 1 0 1 1 1 0 Macrophage scavenger receptor DDE_3 PF13358.6 NODE_82674_length_192_cov_1.541401_g74733_i0forward_frame_2 - 0.065 13.0 0.0 0.067 12.9 0.0 1.0 1 0 0 1 1 1 0 DDE superfamily endonuclease Di19_C PF14571.6 NODE_82672_length_192_cov_1.554140_g74731_i0reverse_frame_3 - 0.17 12.4 0.2 0.38 11.3 0.1 1.6 1 1 1 2 2 2 0 Stress-induced protein Di19, C-terminal HlyIII PF03006.20 NODE_82672_length_192_cov_1.554140_g74731_i0forward_frame_2 - 0.03 14.0 0.1 0.03 14.0 0.1 1.1 1 0 0 1 1 1 0 Haemolysin-III related SapA PF02199.15 NODE_82671_length_192_cov_1.554140_g74730_i0forward_frame_2 - 0.075 13.3 2.4 0.12 12.7 2.4 1.4 1 0 0 1 1 1 0 Saposin A-type domain Period_C PF12114.8 NODE_82669_length_192_cov_1.585987_g74728_i0forward_frame_2 - 0.46 10.1 3.0 0.49 10.0 3.0 1.0 1 0 0 1 1 1 0 Period protein 2/3C-terminal region LRR_1 PF00560.33 NODE_82668_length_192_cov_1.592357_g74727_i0forward_frame_2 - 0.018 15.5 0.4 11 7.0 0.0 2.4 2 0 0 2 2 2 0 Leucine Rich Repeat DUF326 PF03860.16 NODE_82667_length_192_cov_1.592357_g74726_i0reverse_frame_3 - 0.00084 19.2 6.3 0.0014 18.5 6.3 1.4 1 0 0 1 1 1 1 Domain of Unknown Function (DUF326) RepB PF07506.11 NODE_82666_length_192_cov_1.598726_g74725_i0reverse_frame_3 - 5e-06 26.7 0.0 5.2e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 RepB plasmid partitioning protein APP_N PF02177.16 NODE_82665_length_192_cov_1.598726_g74724_i0reverse_frame_2 - 0.04 14.3 0.5 0.045 14.1 0.5 1.1 1 0 0 1 1 1 0 Amyloid A4 N-terminal heparin-binding VirB3 PF05101.13 NODE_82664_length_192_cov_1.598726_g74723_i0reverse_frame_2 - 0.071 13.4 0.1 0.084 13.1 0.1 1.1 1 0 0 1 1 1 0 Type IV secretory pathway, VirB3-like protein Dynactin_p62 PF05502.13 NODE_82657_length_192_cov_1.617834_g74716_i0forward_frame_2 - 1.2 7.8 4.1 1.3 7.7 4.1 1.0 1 0 0 1 1 1 0 Dynactin p62 family RVT_2 PF07727.14 NODE_82656_length_192_cov_1.617834_g74715_i0reverse_frame_3 - 3.8e-07 30.0 0.0 4.3e-07 29.8 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) SpoVAE PF14097.6 NODE_82656_length_192_cov_1.617834_g74715_i0forward_frame_2 - 0.095 12.3 0.0 0.095 12.3 0.0 1.0 1 0 0 1 1 1 0 Stage V sporulation protein AE1 Chorion_2 PF03964.15 NODE_82654_length_192_cov_1.636943_g74713_i0reverse_frame_3 - 0.078 13.8 0.6 0.087 13.7 0.6 1.1 1 0 0 1 1 1 0 Chorion family 2 RVT_1 PF00078.27 NODE_82654_length_192_cov_1.636943_g74713_i0reverse_frame_2 - 0.00025 20.6 0.0 0.00027 20.5 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) ThiF PF00899.21 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 9.2e-22 77.6 0.5 9.8e-22 77.5 0.5 1.0 1 0 0 1 1 1 1 ThiF family Shikimate_DH PF01488.20 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 0.00079 19.5 0.1 0.00086 19.4 0.1 1.0 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase FAD_binding_3 PF01494.19 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 0.012 14.9 0.7 0.012 14.9 0.7 1.0 1 0 0 1 1 1 0 FAD binding domain ELFV_dehydrog PF00208.21 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 0.057 13.1 0.3 0.058 13.1 0.3 1.0 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UDPG_MGDP_dh_N PF03721.14 NODE_82652_length_192_cov_1.643312_g74711_i0forward_frame_3 - 0.14 11.7 0.3 0.15 11.6 0.3 1.0 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UPF0175 PF03683.13 NODE_82649_length_192_cov_1.681529_g74708_i0reverse_frame_2 - 0.19 11.4 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0175) Atrophin-1 PF03154.15 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_3 - 0.09 11.1 1.6 0.092 11.0 1.6 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF2721 PF11026.8 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_2 - 0.00099 19.0 1.8 0.00099 19.0 1.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2721) DUF3915 PF13054.6 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_2 - 0.013 15.5 2.4 0.015 15.3 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_2 - 0.028 12.7 6.2 0.027 12.8 6.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF4519 PF15012.6 NODE_82648_length_192_cov_1.681529_g74707_i0reverse_frame_2 - 0.18 12.0 1.1 0.85 9.8 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4519) CENP-H PF05837.12 NODE_82645_length_192_cov_1.694268_g74704_i0reverse_frame_2 - 0.041 14.3 0.0 0.052 14.0 0.0 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) T_cell_tran_alt PF15128.6 NODE_82642_length_192_cov_1.707006_g74701_i0reverse_frame_3 - 0.033 14.0 0.1 0.034 13.9 0.1 1.1 1 0 0 1 1 1 0 T-cell leukemia translocation-altered NHR2 PF08788.11 NODE_82639_length_192_cov_1.726115_g74698_i0forward_frame_2 - 0.023 14.5 0.4 0.028 14.2 0.4 1.2 1 0 0 1 1 1 0 NHR2 domain like PSD5 PF07637.11 NODE_82639_length_192_cov_1.726115_g74698_i0forward_frame_2 - 0.059 13.7 0.2 0.074 13.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1595) DUF759 PF05537.11 NODE_82638_length_192_cov_1.732484_g74697_i0reverse_frame_2 - 0.11 11.4 1.0 0.12 11.2 1.0 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF759) Big_9 PF17963.1 NODE_82635_length_192_cov_1.757962_g74694_i0forward_frame_3 - 0.04 14.7 1.7 0.063 14.0 1.7 1.4 1 1 0 1 1 1 0 Bacterial Ig domain DUF1410 PF07198.11 NODE_82633_length_192_cov_1.764331_g74692_i0reverse_frame_2 - 0.066 13.7 0.1 0.09 13.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1410) DUF5348 PF17295.2 NODE_82631_length_192_cov_1.770701_g74690_i0forward_frame_2 - 0.011 15.7 0.2 0.014 15.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5348) Fig1 PF12351.8 NODE_82629_length_192_cov_1.770701_g74688_i0reverse_frame_3 - 0.11 12.4 0.2 0.13 12.2 0.2 1.0 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 DUF572 PF04502.13 NODE_82628_length_192_cov_1.770701_g74687_i0reverse_frame_3 - 3.9e-18 66.2 3.3 4.1e-18 66.1 3.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) Trimer_CC PF08954.11 NODE_82627_length_192_cov_1.777070_g74686_i0reverse_frame_2 - 0.13 11.9 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Trimerisation motif SpoVG PF04026.12 NODE_82626_length_192_cov_1.777070_g74685_i0forward_frame_3 - 0.1 12.8 0.3 0.15 12.3 0.3 1.2 1 0 0 1 1 1 0 SpoVG DUF2686 PF10887.8 NODE_82623_length_192_cov_1.789809_g74682_i0forward_frame_3 - 3.8e-34 117.9 0.0 4e-34 117.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2686) DUF2023 PF09633.10 NODE_82622_length_192_cov_1.815287_g74681_i0reverse_frame_2 - 0.027 14.6 0.1 0.032 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2023) BRX PF08381.11 NODE_82620_length_192_cov_1.821656_g74679_i0reverse_frame_3 - 0.21 11.0 0.1 0.29 10.5 0.1 1.2 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 DUF4215 PF13948.6 NODE_82617_length_192_cov_1.840764_g74676_i0reverse_frame_3 - 4.3e-12 46.3 24.6 2.7e-06 27.7 7.4 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4215) Asparaginase_C PF17763.1 NODE_82617_length_192_cov_1.840764_g74676_i0reverse_frame_3 - 0.17 12.1 0.2 8 6.7 0.0 2.0 1 1 1 2 2 2 0 Glutaminase/Asparaginase C-terminal domain KH_1 PF00013.29 NODE_82614_length_192_cov_1.840764_g74673_i0forward_frame_2 - 0.099 12.5 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 KH domain Herpes_U34 PF04541.13 NODE_82612_length_192_cov_1.878981_g74671_i0forward_frame_2 - 0.0096 15.2 0.2 0.01 15.1 0.2 1.0 1 0 0 1 1 1 1 Herpesvirus virion protein U34 GLTP PF08718.11 NODE_82610_length_192_cov_1.878981_g74669_i0reverse_frame_2 - 0.092 13.0 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Glycolipid transfer protein (GLTP) Defensin_beta PF00711.19 NODE_82609_length_192_cov_1.891720_g74668_i0reverse_frame_2 - 0.074 13.1 0.5 0.074 13.1 0.5 1.4 2 0 0 2 2 2 0 Beta defensin DUF1719 PF08224.11 NODE_82609_length_192_cov_1.891720_g74668_i0forward_frame_3 - 0.093 11.8 0.1 0.093 11.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) Gemini_AC4_5_2 PF08464.10 NODE_82607_length_192_cov_1.923567_g74666_i0reverse_frame_3 - 0.066 13.2 0.1 0.091 12.7 0.1 1.2 1 0 0 1 1 1 0 Geminivirus AC4/5 conserved region TSC22 PF01166.18 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 3.4e-05 24.0 2.7 5.1e-05 23.5 2.4 1.4 1 1 0 1 1 1 1 TSC-22/dip/bun family bZIP_1 PF00170.21 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.00069 19.7 3.3 0.00069 19.7 3.3 1.9 1 1 1 2 2 2 1 bZIP transcription factor HAP1_N PF04849.13 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.0043 16.3 0.8 0.0043 16.3 0.8 1.2 1 0 0 1 1 1 1 HAP1 N-terminal conserved region ZapB PF06005.12 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.03 14.8 3.5 0.038 14.4 3.5 1.4 1 1 0 1 1 1 0 Cell division protein ZapB bZIP_2 PF07716.15 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.037 14.1 0.5 0.037 14.1 0.5 1.8 2 0 0 2 2 2 0 Basic region leucine zipper Cnn_1N PF07989.11 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.048 13.8 5.1 0.33 11.1 5.1 1.9 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 DivIC PF04977.15 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.06 13.1 1.0 0.06 13.1 1.0 1.5 2 0 0 2 2 2 0 Septum formation initiator FlaC_arch PF05377.11 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.12 12.8 4.7 0.13 12.7 0.9 2.0 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) YabA PF06156.13 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.14 12.8 3.5 0.26 11.9 3.5 1.6 1 1 0 1 1 1 0 Initiation control protein YabA Desmo_N PF06771.11 NODE_82606_length_192_cov_1.949045_g74665_i0reverse_frame_2 - 0.17 12.3 2.3 0.52 10.7 2.3 1.8 1 1 0 1 1 1 0 Viral Desmoplakin N-terminus Raco_middle PF17651.1 NODE_82603_length_192_cov_1.980892_g74662_i0forward_frame_2 - 0.035 13.8 0.0 0.037 13.7 0.0 1.1 1 0 0 1 1 1 0 RACo middle region Importin_rep_3 PF18806.1 NODE_82600_length_192_cov_1.987261_g74659_i0reverse_frame_3 - 0.044 13.8 0.6 0.085 12.9 0.6 1.6 1 1 0 1 1 1 0 Importin 13 repeat EZH2_N PF18601.1 NODE_82598_length_192_cov_1.993631_g74657_i0reverse_frame_3 - 0.037 14.4 0.1 0.045 14.1 0.1 1.1 1 0 0 1 1 1 0 EZH2 N-terminal domain DUF3630 PF12305.8 NODE_82598_length_192_cov_1.993631_g74657_i0forward_frame_3 - 0.021 14.9 0.3 0.024 14.7 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3630) HGWP PF03578.15 NODE_82597_length_192_cov_2.000000_g74656_i0forward_frame_2 - 0.045 13.2 0.2 0.071 12.6 0.2 1.3 1 0 0 1 1 1 0 HGWP repeat Peptidase_U4 PF03419.13 NODE_82595_length_192_cov_2.012739_g74654_i0reverse_frame_3 - 0.028 13.7 0.9 0.033 13.5 0.9 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA 7tm_2 PF00002.24 NODE_82587_length_192_cov_2.050955_g74646_i0reverse_frame_3 - 0.0065 15.8 2.6 0.0071 15.7 2.6 1.0 1 0 0 1 1 1 1 7 transmembrane receptor (Secretin family) DUF5326 PF17260.2 NODE_82587_length_192_cov_2.050955_g74646_i0reverse_frame_3 - 0.067 13.3 2.6 0.08 13.1 2.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5326) ISET-FN3_linker PF16625.5 NODE_82584_length_192_cov_2.095541_g74643_i0forward_frame_2 - 0.12 12.9 0.0 0.15 12.6 0.0 1.1 1 0 0 1 1 1 0 Unstructured linking region I-set and fnIII on Brother of CDO DUF4131 PF13567.6 NODE_82579_length_192_cov_2.121019_g74638_i0forward_frame_3 - 1.2 8.8 6.1 1.3 8.7 6.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) CreD PF06123.12 NODE_82579_length_192_cov_2.121019_g74638_i0forward_frame_3 - 2.6 6.7 6.5 2.9 6.6 6.5 1.0 1 0 0 1 1 1 0 Inner membrane protein CreD RICH PF05062.12 NODE_82576_length_192_cov_2.235669_g74635_i0forward_frame_2 - 0.0015 18.9 0.8 0.0017 18.6 0.8 1.1 1 0 0 1 1 1 1 RICH domain DUF3716 PF12511.8 NODE_82575_length_192_cov_2.235669_g74634_i0reverse_frame_2 - 0.041 13.9 5.6 0.054 13.6 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3716) Transgly_assoc PF04226.13 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 1.9e-17 63.2 12.5 2.4e-17 62.9 12.5 1.1 1 0 0 1 1 1 1 Transglycosylase associated protein DUF2306 PF10067.9 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 0.045 14.0 1.8 0.045 13.9 1.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2306) Baculo_gp64 PF03273.13 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 0.13 11.1 1.2 0.11 11.2 1.2 1.0 1 0 0 1 1 1 0 Baculovirus gp64 envelope glycoprotein family Gly-zipper_Omp PF13488.6 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 0.55 10.3 7.9 2.9 7.9 7.9 1.9 1 1 0 1 1 1 0 Glycine zipper DUF2207 PF09972.9 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 0.81 8.4 6.3 0.93 8.2 6.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4282 PF14110.6 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 1.2 9.9 7.4 1.4 9.7 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) TraL PF07178.11 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 1.7 9.2 5.4 0.66 10.5 1.9 1.8 1 1 1 2 2 2 0 TraL protein Halogen_Hydrol PF10112.9 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 2.4 8.1 4.0 2.8 7.9 4.0 1.1 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein DUF3169 PF11368.8 NODE_82575_length_192_cov_2.235669_g74634_i0forward_frame_2 - 8.9 5.7 10.1 22 4.4 10.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3169) S4 PF01479.25 NODE_82574_length_192_cov_2.242038_g74633_i0reverse_frame_2 - 0.019 14.7 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 S4 domain RRN9 PF10680.9 NODE_82573_length_192_cov_2.242038_g74632_i0forward_frame_3 - 0.023 15.0 0.1 0.026 14.8 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor Copine PF07002.16 NODE_82572_length_192_cov_2.254777_g74631_i0reverse_frame_3 - 6.4e-13 48.7 0.1 6.8e-13 48.6 0.1 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 NODE_82572_length_192_cov_2.254777_g74631_i0reverse_frame_3 - 0.13 12.4 0.0 0.13 12.4 0.0 1.0 1 0 0 1 1 1 0 vWA found in TerF C terminus CBP_BcsF PF11120.8 NODE_82570_length_192_cov_2.280255_g74629_i0reverse_frame_2 - 0.074 13.2 0.6 0.11 12.6 0.6 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF Kinesin PF00225.23 NODE_82568_length_192_cov_2.280255_g74627_i0reverse_frame_3 - 1.8e-26 92.8 0.1 1.9e-26 92.8 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Macin PF14865.6 NODE_82568_length_192_cov_2.280255_g74627_i0forward_frame_3 - 0.072 13.6 0.0 0.081 13.5 0.0 1.2 1 0 0 1 1 1 0 Macin Nbl1_Borealin_N PF10444.9 NODE_82566_length_192_cov_2.286624_g74625_i0reverse_frame_3 - 0.044 13.4 0.0 0.06 13.0 0.0 1.2 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal Peptidase_C57 PF03290.13 NODE_82566_length_192_cov_2.286624_g74625_i0reverse_frame_3 - 0.053 12.2 1.4 0.052 12.3 1.4 1.0 1 0 0 1 1 1 0 Vaccinia virus I7 processing peptidase zf-primase PF09329.11 NODE_82566_length_192_cov_2.286624_g74625_i0reverse_frame_3 - 0.14 12.0 0.5 0.33 10.8 0.5 1.7 1 1 0 1 1 1 0 Primase zinc finger RICTOR_M PF14666.6 NODE_82566_length_192_cov_2.286624_g74625_i0forward_frame_2 - 0.00015 21.5 0.5 0.00019 21.2 0.5 1.0 1 0 0 1 1 1 1 Rapamycin-insensitive companion of mTOR, middle domain DUF5638 PF18688.1 NODE_82563_length_192_cov_2.375796_g74622_i0reverse_frame_2 - 0.0023 18.2 3.8 0.0024 18.1 3.8 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5638) Holin_BlyA PF05102.12 NODE_82563_length_192_cov_2.375796_g74622_i0reverse_frame_2 - 0.081 12.9 0.2 0.13 12.3 0.2 1.4 1 0 0 1 1 1 0 holin, BlyA family NEMP PF10225.9 NODE_82563_length_192_cov_2.375796_g74622_i0forward_frame_3 - 0.082 12.6 5.5 0.092 12.4 5.5 1.0 1 0 0 1 1 1 0 NEMP family GET2 PF08690.10 NODE_82561_length_192_cov_2.407643_g74620_i0forward_frame_2 - 0.17 11.6 0.2 0.17 11.5 0.2 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 Srg PF02118.21 NODE_82559_length_192_cov_2.433121_g74618_i0reverse_frame_3 - 0.029 14.0 1.3 0.032 13.9 1.3 1.0 1 0 0 1 1 1 0 Srg family chemoreceptor LRR19-TM PF15176.6 NODE_82559_length_192_cov_2.433121_g74618_i0forward_frame_2 - 0.066 13.2 0.2 0.08 13.0 0.2 1.2 1 1 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Response_reg PF00072.24 NODE_82557_length_192_cov_2.452229_g74616_i0forward_frame_3 - 1.1e-16 61.0 0.0 1.1e-16 61.0 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain zf-C2HC5 PF06221.13 NODE_82555_length_192_cov_2.484076_g74614_i0forward_frame_3 - 0.97 9.5 7.3 0.32 11.0 3.5 2.0 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type SVM_signal PF12113.8 NODE_82555_length_192_cov_2.484076_g74614_i0forward_frame_3 - 1.4 8.9 8.3 0.28 11.1 3.6 2.1 2 0 0 2 2 2 0 SVM protein signal sequence zf-UBP PF02148.19 NODE_82555_length_192_cov_2.484076_g74614_i0forward_frame_3 - 1.8 9.0 4.8 2.7 8.4 0.5 2.2 1 1 1 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein zf-B_box PF00643.24 NODE_82550_length_192_cov_2.598726_g74609_i0forward_frame_2 - 4.9e-06 26.6 2.6 6.2e-06 26.3 2.6 1.1 1 0 0 1 1 1 1 B-box zinc finger Cuticle_2 PF08184.11 NODE_82548_length_192_cov_2.656051_g74607_i0forward_frame_3 - 0.1 12.6 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 Cuticle protein 7 isoform family CTXphi_pIII-N1 PF16710.5 NODE_82547_length_192_cov_2.668790_g74606_i0reverse_frame_2 - 0.1 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII MLD PF11647.8 NODE_82544_length_192_cov_2.713376_g74603_i0forward_frame_3 - 0.059 13.6 0.1 0.072 13.4 0.1 1.1 1 0 0 1 1 1 0 Membrane Localization Domain PrcB_C PF14343.6 NODE_82544_length_192_cov_2.713376_g74603_i0forward_frame_3 - 0.14 12.3 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 PrcB C-terminal TMEM71 PF15121.6 NODE_82542_length_192_cov_2.777070_g74601_i0forward_frame_2 - 0.05 13.3 0.2 0.057 13.1 0.2 1.1 1 0 0 1 1 1 0 TMEM71 protein family GAPES2 PF17156.4 NODE_82541_length_192_cov_2.802548_g74600_i0reverse_frame_3 - 7.5e-39 133.6 0.5 8.1e-39 133.5 0.5 1.0 1 0 0 1 1 1 1 Gammaproteobacterial periplasmic sensor domain YL1_C PF08265.11 NODE_82541_length_192_cov_2.802548_g74600_i0forward_frame_3 - 0.19 11.5 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 YL1 nuclear protein C-terminal domain MLANA PF14991.6 NODE_82538_length_192_cov_2.898089_g74597_i0forward_frame_3 - 0.13 12.5 0.5 0.14 12.5 0.5 1.0 1 0 0 1 1 1 0 Protein melan-A Toxin_2 PF00451.19 NODE_82537_length_192_cov_2.910828_g74596_i0forward_frame_2 - 0.78 10.1 14.5 0.17 12.2 2.8 3.1 1 1 2 3 3 3 0 Scorpion short toxin, BmKK2 NAD_binding_4 PF07993.12 NODE_82529_length_192_cov_3.617834_g74588_i0reverse_frame_2 - 3.6e-16 59.1 0.0 3.8e-16 59.0 0.0 1.0 1 0 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.19 NODE_82529_length_192_cov_3.617834_g74588_i0reverse_frame_2 - 0.0072 15.4 0.1 0.0075 15.3 0.1 1.0 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 NODE_82529_length_192_cov_3.617834_g74588_i0reverse_frame_2 - 0.18 11.2 0.0 0.18 11.2 0.0 1.0 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Zn-ribbon_8 PF09723.10 NODE_82527_length_192_cov_3.796178_g74586_i0forward_frame_3 - 0.045 13.9 0.0 0.045 13.9 0.0 2.0 1 1 1 2 2 2 0 Zinc ribbon domain zf-RING_7 PF02591.15 NODE_82527_length_192_cov_3.796178_g74586_i0forward_frame_3 - 0.14 12.4 6.9 0.46 10.7 0.0 3.0 3 0 0 3 3 3 0 C4-type zinc ribbon domain CLP_protease PF00574.23 NODE_82524_length_192_cov_4.108280_g74583_i0forward_frame_2 - 1.7e-07 31.3 0.0 1.9e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Clp protease TACC_C PF05010.14 NODE_82523_length_192_cov_4.108280_g74582_i0forward_frame_3 - 0.013 15.3 0.7 0.014 15.2 0.7 1.0 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal CP12 PF02672.15 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 0.01 16.6 3.6 0.013 16.3 3.6 1.1 1 0 0 1 1 1 0 CP12 domain Phage_GP20 PF06810.11 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 0.045 13.6 15.2 0.051 13.4 15.2 1.1 1 0 0 1 1 1 0 Phage minor structural protein GP20 DUF4795 PF16043.5 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 0.074 12.6 11.1 0.08 12.5 11.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) TMPIT PF07851.13 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 1.4 8.1 9.7 1.4 8.1 9.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein DUF4407 PF14362.6 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 2.6 7.3 7.2 2.7 7.2 7.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Tho2 PF11262.8 NODE_82520_length_192_cov_6.573248_g74579_i0forward_frame_2 - 4 6.6 10.5 4.4 6.4 10.5 1.0 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 TMEM215 PF15746.5 NODE_82515_length_192_cov_15.904459_g74574_i0reverse_frame_3 - 0.062 12.8 0.3 0.075 12.5 0.3 1.1 1 0 0 1 1 1 0 TMEM215 family Ribosomal_60s PF00428.19 NODE_82512_length_192_cov_20.732484_g74571_i0reverse_frame_2 - 0.64 10.6 6.5 0.83 10.3 6.5 1.3 1 1 0 1 1 1 0 60s Acidic ribosomal protein Toxin_2 PF00451.19 NODE_82512_length_192_cov_20.732484_g74571_i0forward_frame_2 - 1.4 9.3 6.7 1.9 8.9 6.7 1.2 1 0 0 1 1 1 0 Scorpion short toxin, BmKK2 Kin17_mid PF10357.9 NODE_82511_length_192_cov_21.057325_g74570_i0reverse_frame_2 - 0.11 12.5 0.3 0.12 12.3 0.3 1.1 1 0 0 1 1 1 0 Domain of Kin17 curved DNA-binding protein DUF3781 PF12636.7 NODE_82510_length_192_cov_23.630573_g74569_i0reverse_frame_3 - 0.027 14.3 2.9 0.035 14.0 2.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3781) DUF1825 PF08855.10 NODE_82510_length_192_cov_23.630573_g74569_i0reverse_frame_3 - 0.096 12.6 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1825) Phage_tail_L PF05100.12 NODE_82509_length_192_cov_24.210191_g74568_i0forward_frame_3 - 0.13 11.6 0.1 0.13 11.6 0.1 1.1 1 0 0 1 1 1 0 Phage minor tail protein L cPLA2_C2 PF18695.1 NODE_82507_length_192_cov_25.541401_g74566_i0forward_frame_3 - 0.16 12.0 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Cytosolic phospholipases A2 C2-domain Microvir_J PF04726.13 NODE_82504_length_192_cov_28.159236_g74563_i0reverse_frame_2 - 7.6 6.6 8.2 2 8.4 1.4 2.6 2 1 1 3 3 3 0 Microvirus J protein Lustrin_cystein PF14625.6 NODE_82499_length_192_cov_29.974522_g74558_i0reverse_frame_3 - 0.0031 17.8 0.3 0.0042 17.4 0.3 1.2 1 0 0 1 1 1 1 Lustrin, cysteine-rich repeated domain Antistasin PF02822.14 NODE_82494_length_192_cov_33.726115_g74553_i0forward_frame_3 - 0.038 14.6 1.3 0.059 14.0 1.3 1.3 1 0 0 1 1 1 0 Antistasin family Rz1 PF06085.11 NODE_82492_length_192_cov_34.732484_g74551_i0reverse_frame_2 - 0.078 12.7 5.3 0.18 11.6 0.3 2.2 2 0 0 2 2 2 0 Lipoprotein Rz1 precursor DUF4309 PF14172.6 NODE_82490_length_192_cov_35.751592_g74549_i0forward_frame_2 - 0.047 13.7 0.1 0.051 13.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) Peptidase_C48 PF02902.19 NODE_82486_length_192_cov_38.910828_g74545_i0forward_frame_3 - 0.04 13.7 0.2 0.043 13.7 0.2 1.1 1 0 0 1 1 1 0 Ulp1 protease family, C-terminal catalytic domain TMCCDC2 PF15844.5 NODE_82480_length_192_cov_42.305732_g74539_i0reverse_frame_3 - 0.024 14.6 0.5 0.024 14.5 0.5 1.0 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 Apt1 PF10351.9 NODE_82480_length_192_cov_42.305732_g74539_i0forward_frame_2 - 0.16 10.8 0.0 0.17 10.7 0.0 1.0 1 0 0 1 1 1 0 Golgi-body localisation protein domain Presenilin PF01080.17 NODE_82479_length_192_cov_43.834395_g74538_i0forward_frame_3 - 0.64 8.7 5.2 0.59 8.8 5.2 1.1 1 0 0 1 1 1 0 Presenilin FBA_3 PF08268.12 NODE_82475_length_192_cov_46.936306_g74534_i0forward_frame_2 - 0.063 13.2 0.0 0.068 13.1 0.0 1.1 1 0 0 1 1 1 0 F-box associated domain BBS2_N PF14781.6 NODE_82473_length_192_cov_47.165605_g74532_i0reverse_frame_2 - 1.8e-08 34.2 0.1 2.5e-08 33.7 0.1 1.3 1 0 0 1 1 1 1 Ciliary BBSome complex subunit 2, N-terminal Antistasin PF02822.14 NODE_82471_length_192_cov_48.350318_g74530_i0reverse_frame_2 - 0.036 14.7 0.4 0.065 13.9 0.4 1.4 1 0 0 1 1 1 0 Antistasin family Stomagen PF16851.5 NODE_82471_length_192_cov_48.350318_g74530_i0forward_frame_2 - 0.02 14.9 0.0 0.027 14.5 0.0 1.3 1 0 0 1 1 1 0 Stomagen DUF1364 PF07102.12 NODE_82467_length_192_cov_51.382166_g74526_i0forward_frame_3 - 0.028 14.3 0.3 0.038 13.8 0.2 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1364) DUF2805 PF10985.8 NODE_82466_length_192_cov_53.019108_g74525_i0reverse_frame_3 - 0.079 13.4 0.0 0.1 13.0 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2805) zf-HIT PF04438.16 NODE_82462_length_192_cov_55.624204_g74521_i0reverse_frame_3 - 0.079 12.8 0.6 0.079 12.8 0.6 2.4 3 0 0 3 3 3 0 HIT zinc finger Cytomega_TRL10 PF06084.11 NODE_82457_length_192_cov_75.980892_g74516_i0reverse_frame_3 - 0.11 12.5 1.0 0.12 12.4 1.0 1.2 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein MORN PF02493.20 NODE_82456_length_192_cov_77.700637_g74515_i0reverse_frame_2 - 2.6e-07 30.1 6.1 0.0039 17.0 0.3 2.5 2 0 0 2 2 2 2 MORN repeat DUF1496 PF07383.12 NODE_82452_length_192_cov_83.248408_g74511_i0forward_frame_3 - 0.15 11.7 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1496) RPAP1_N PF08621.10 NODE_82450_length_192_cov_87.560510_g74509_i0reverse_frame_2 - 0.042 13.6 0.1 0.042 13.6 0.1 1.5 2 0 0 2 2 2 0 RPAP1-like, N-terminal Pox_A_type_inc PF04508.12 NODE_82450_length_192_cov_87.560510_g74509_i0reverse_frame_2 - 0.82 9.6 5.9 0.85 9.6 0.3 2.7 2 2 0 2 2 2 0 Viral A-type inclusion protein repeat zf-C3HC4_2 PF13923.6 NODE_82449_length_192_cov_94.458599_g74508_i0reverse_frame_3 - 0.0045 16.8 1.6 1.2 9.0 0.4 2.1 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_82449_length_192_cov_94.458599_g74508_i0forward_frame_3 - 2.3 8.3 10.5 5.6 7.0 10.5 1.9 1 1 0 1 1 1 0 zinc-RING finger domain Tmemb_40 PF10160.9 NODE_82447_length_192_cov_99.573248_g74506_i0forward_frame_2 - 0.013 15.0 1.5 0.014 14.8 1.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein HEAT_EZ PF13513.6 NODE_82446_length_192_cov_101.248408_g74505_i0reverse_frame_3 - 0.013 16.0 0.9 0.15 12.6 0.9 2.0 1 1 0 1 1 1 0 HEAT-like repeat Cadherin_tail PF15974.5 NODE_82441_length_192_cov_142.235669_g74500_i0forward_frame_2 - 0.19 12.1 6.0 0.22 11.9 6.0 1.0 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region S1FA PF04689.13 NODE_82440_length_192_cov_184.445860_g74499_i0reverse_frame_3 - 0.011 15.8 0.4 0.018 15.1 0.4 1.4 1 0 0 1 1 1 0 DNA binding protein S1FA DUF2628 PF10947.8 NODE_82440_length_192_cov_184.445860_g74499_i0forward_frame_3 - 0.66 10.4 5.6 0.45 10.9 4.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2628) GATase_2 PF00310.21 NODE_82438_length_192_cov_226.630573_g74497_i0reverse_frame_2 - 0.063 12.0 0.5 0.063 12.0 0.5 1.0 1 0 0 1 1 1 0 Glutamine amidotransferases class-II Zap1_zf2 PF18217.1 NODE_82436_length_192_cov_782.904459_g74495_i0forward_frame_2 - 4.1 7.5 7.2 0.38 10.8 2.2 1.8 2 0 0 2 2 2 0 Zap1 zinc finger 2 CRISPR_Cas9_WED PF18061.1 ORF99535 - 0.046 13.8 0.1 0.051 13.7 0.1 1.1 1 0 0 1 1 1 0 CRISPR-Cas9 WED domain T3SS_ATPase_C PF18269.1 ORF99535 - 0.07 13.0 0.1 0.095 12.6 0.1 1.2 1 0 0 1 1 1 0 T3SS EscN ATPase C-terminal domain DUF3959 PF13105.6 ORF99146 - 0.15 11.6 0.3 0.17 11.4 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3959) RestrictionMunI PF11407.8 ORF98909 - 0.11 12.2 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Type II restriction enzyme MunI DUF2628 PF10947.8 ORF98591 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) End_beta_propel PF12217.8 ORF98107 - 0.32 9.6 0.4 0.3 9.7 0.4 1.0 1 0 0 1 1 1 0 Catalytic beta propeller domain of bacteriophage endosialidase Keratin_2_head PF16208.5 ORF9784 - 0.089 12.9 0.3 0.097 12.8 0.3 1.0 1 0 0 1 1 1 0 Keratin type II head V-set_CD47 PF08204.11 ORF97482 - 0.017 15.1 1.2 0.02 14.9 1.2 1.1 1 0 0 1 1 1 0 CD47 immunoglobulin-like domain MAF_flag10 PF01973.18 ORF97482 - 0.036 13.8 0.1 0.037 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF115 zf-Tim10_DDP PF02953.15 ORF9726 - 0.062 13.0 0.1 0.28 10.9 0.0 1.8 2 0 0 2 2 2 0 Tim10/DDP family zinc finger DUF5313 PF17240.2 ORF97003 - 0.2 12.1 0.6 0.22 12.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Asp4 PF16996.5 ORF97003 - 1.3 8.9 6.1 1.9 8.3 6.1 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ycf1 PF05758.12 ORF97003 - 3.1 5.6 7.5 3.1 5.5 7.5 1.0 1 0 0 1 1 1 0 Ycf1 Pkinase PF00069.25 ORF9678 - 6.7e-09 35.5 0.0 7.1e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 ORF9678 - 0.004 16.8 0.0 0.004 16.8 0.0 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_Tyr PF07714.17 ORF9678 - 0.096 11.9 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase DUF2208 PF09973.9 ORF96712 - 0.042 13.5 2.2 0.046 13.3 2.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) Pkinase PF00069.25 ORF95583 - 6.7e-09 35.5 0.0 7.1e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 ORF95583 - 0.004 16.8 0.0 0.004 16.8 0.0 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_Tyr PF07714.17 ORF95583 - 0.096 11.9 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase DUF4694 PF15765.5 ORF95271 - 0.0064 16.5 0.3 0.0074 16.3 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4694) TIL PF01826.17 ORF95104 - 1 9.6 11.0 2.9 8.2 11.0 1.8 1 1 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain ASFV_p27 PF06556.11 ORF9510 - 0.11 12.6 0.5 0.11 12.6 0.5 1.1 1 0 0 1 1 1 0 IAP-like protein p27 C-terminus DUF1211 PF06736.11 ORF9510 - 0.12 12.8 2.3 0.13 12.7 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1211) NapE PF06796.11 ORF94783 - 0.016 14.8 0.0 0.026 14.0 0.0 1.3 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE DUF594 PF04578.13 ORF94774 - 0.097 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF594 HTH_39 PF14090.6 ORF94678 - 0.043 13.6 0.1 0.062 13.1 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3486 PF11985.8 ORF94477 - 0.28 11.6 0.0 0.3 11.5 0.0 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3486) G6PD_C PF02781.16 ORF94360 - 1.7e-15 57.0 0.3 1.9e-15 56.8 0.3 1.0 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain HSNSD PF12062.8 ORF94133 - 0.023 13.4 0.3 0.023 13.4 0.3 1.0 1 0 0 1 1 1 0 heparan sulfate-N-deacetylase DUF3446 PF11928.8 ORF94051 - 0.013 15.7 13.5 0.015 15.6 13.5 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain RXLR PF16810.5 ORF94051 - 0.18 12.2 0.1 0.18 12.2 0.1 1.1 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity SR-25 PF10500.9 ORF94051 - 0.9 9.1 18.9 0.88 9.1 18.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Sporozoite_P67 PF05642.11 ORF94051 - 2.6 6.0 9.5 2.6 6.0 9.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF515 PF04415.12 ORF94051 - 3.2 6.0 7.0 2.8 6.2 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) DUF4167 PF13763.6 ORF93855 - 0.002 18.2 0.2 0.0022 18.1 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4167) DUF3446 PF11928.8 ORF93699 - 0.013 15.7 13.5 0.015 15.6 13.5 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain RXLR PF16810.5 ORF93699 - 0.18 12.2 0.1 0.18 12.2 0.1 1.1 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity SR-25 PF10500.9 ORF93699 - 0.9 9.1 18.9 0.88 9.1 18.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Sporozoite_P67 PF05642.11 ORF93699 - 2.6 6.0 9.5 2.6 6.0 9.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF515 PF04415.12 ORF93699 - 3.2 6.0 7.0 2.8 6.2 7.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF515) pPIWI_RE_Z PF18155.1 ORF92914 - 0.075 12.9 0.3 0.084 12.7 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z DASH_Spc19 PF08287.11 ORF92843 - 0.039 13.9 1.5 0.046 13.6 1.5 1.1 1 0 0 1 1 1 0 Spc19 Pkinase PF00069.25 ORF92433 - 6.7e-09 35.5 0.0 7.1e-09 35.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain FTA2 PF13095.6 ORF92433 - 0.004 16.8 0.0 0.004 16.8 0.0 1.1 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_Tyr PF07714.17 ORF92433 - 0.096 11.9 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein tyrosine kinase MTA_R1 PF17226.2 ORF91895 - 0.074 13.2 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 MTA R1 domain DUF4416 PF14385.6 ORF91867 - 0.0094 15.9 0.0 0.01 15.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4416) UPF0231 PF06062.11 ORF91867 - 0.093 13.0 0.1 0.14 12.4 0.1 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0231) IBV_3A PF03617.13 ORF91568 - 0.067 13.2 0.0 0.08 12.9 0.0 1.2 1 0 0 1 1 1 0 IBV 3A protein DUF1987 PF09345.10 ORF91568 - 0.12 12.1 0.0 0.12 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) CBM_20 PF00686.19 ORF91532 - 0.043 13.7 0.0 0.049 13.5 0.0 1.1 1 0 0 1 1 1 0 Starch binding domain IRK_C PF17655.1 ORF91049 - 0.074 12.7 0.0 0.087 12.4 0.0 1.0 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain TMEM132D_C PF15706.5 ORF90783 - 0.075 12.8 1.0 0.095 12.5 1.0 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Ribosomal_L40e PF01020.17 ORF90629 - 1.1 9.2 5.6 0.44 10.5 1.2 2.2 1 1 1 2 2 2 0 Ribosomal L40e family OTT_1508_deam PF14441.6 ORF90522 - 0.53 10.3 6.0 0.28 11.2 4.4 1.5 1 1 0 1 1 1 0 OTT_1508-like deaminase Cytidylate_kin PF02224.18 ORF90500 - 0.024 14.4 0.1 0.028 14.2 0.1 1.1 1 0 0 1 1 1 0 Cytidylate kinase Lipin_N PF04571.14 ORF90409 - 0.036 14.0 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 lipin, N-terminal conserved region TPP_enzyme_N PF02776.18 ORF90409 - 0.041 13.5 0.5 0.044 13.4 0.5 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Med19 PF10278.9 ORF90296 - 1.3 8.9 13.4 1.4 8.8 13.4 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Cadherin_tail PF15974.5 ORF90296 - 1.4 9.3 8.3 1.4 9.2 8.3 1.1 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region PriX PF18689.1 ORF90064 - 0.076 13.4 0.9 0.15 12.4 0.6 1.6 1 1 1 2 2 2 0 Primase X Sigma70_r2 PF04542.14 ORF90064 - 0.14 11.9 1.2 0.69 9.7 0.0 2.0 2 0 0 2 2 2 0 Sigma-70 region 2 SPO11_like PF03533.14 ORF89833 - 0.12 12.4 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 SPO11 homologue Stimulus_sens_1 PF13756.6 ORF89300 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain DUF2663 PF10864.8 ORF89134 - 0.37 11.2 1.3 0.43 11.0 1.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Sprouty PF05210.13 ORF88923 - 0.15 12.4 7.5 0.22 11.9 7.5 1.5 1 1 0 1 1 1 0 Sprouty protein (Spry) L31 PF09784.9 ORF88731 - 0.042 14.3 0.2 0.048 14.1 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 Phage_lambda_P PF06992.11 ORF87888 - 0.33 10.7 3.7 0.33 10.7 3.7 1.0 1 0 0 1 1 1 0 Replication protein P RNHCP PF12647.7 ORF87565 - 0.042 13.8 0.1 0.048 13.6 0.1 1.1 1 0 0 1 1 1 0 RNHCP domain DUF5423 PF17461.2 ORF87554 - 7 5.4 6.8 8.4 5.1 6.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Myticin-prepro PF10690.9 ORF86554 - 8.6 6.7 9.7 13 6.1 9.7 1.3 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel zf-NF-X1 PF01422.17 ORF86518 - 3.8 7.7 7.2 18 5.5 1.1 2.4 2 1 0 2 2 2 0 NF-X1 type zinc finger Protamine_like PF06382.11 ORF86109 - 0.067 13.4 0.2 0.077 13.2 0.2 1.1 1 0 0 1 1 1 0 Protamine and protamine like SPC12 PF06645.13 ORF85174 - 0.37 10.9 4.7 0.15 12.2 2.4 1.5 1 1 1 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF1955 PF09205.10 ORF84861 - 0.0031 17.3 0.3 0.0033 17.2 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1955) 7TMR-DISM_7TM PF07695.11 ORF84733 - 0.033 14.1 0.3 0.033 14.1 0.3 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling CLN6 PF15156.6 ORF84624 - 0.014 14.7 0.0 0.015 14.6 0.0 1.1 1 0 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 6 APG9 PF04109.16 ORF84624 - 0.19 10.7 0.1 0.21 10.6 0.1 1.0 1 0 0 1 1 1 0 Autophagy protein Apg9 Prok-JAB PF14464.6 ORF84407 - 0.02 14.7 0.0 0.021 14.6 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic homologs of the JAB domain CAF1 PF04857.20 ORF84384 - 0.15 11.2 2.1 0.15 11.2 2.1 1.0 1 0 0 1 1 1 0 CAF1 family ribonuclease SRF-TF PF00319.18 ORF84262 - 1.5 8.4 9.5 7.8 6.1 5.6 2.2 2 0 0 2 2 2 0 SRF-type transcription factor (DNA-binding and dimerisation domain) KASH PF10541.9 ORF83979 - 0.66 10.3 7.1 1.3 9.4 7.1 1.5 1 1 0 1 1 1 0 Nuclear envelope localisation domain Colipase-like PF15083.6 ORF83715 - 0.14 12.3 5.9 0.16 12.1 5.9 1.2 1 0 0 1 1 1 0 Colipase-like Cys_Knot_tox PF17486.2 ORF833 - 0.014 15.6 0.3 0.018 15.2 0.3 1.1 1 0 0 1 1 1 0 Cystine knot toxins RnaseA PF00074.20 ORF833 - 0.059 13.8 0.7 0.075 13.5 0.7 1.1 1 0 0 1 1 1 0 Pancreatic ribonuclease TMEM132D_C PF15706.5 ORF83264 - 0.075 12.8 1.0 0.095 12.5 1.0 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term KNTase_C PF07827.11 ORF83141 - 0.035 13.9 0.1 0.04 13.7 0.1 1.0 1 0 0 1 1 1 0 KNTase C-terminal domain Maelstrom PF13017.6 ORF83141 - 0.058 13.0 0.6 0.057 13.1 0.6 1.0 1 0 0 1 1 1 0 piRNA pathway germ-plasm component RNHCP PF12647.7 ORF82816 - 0.042 13.8 0.1 0.048 13.6 0.1 1.1 1 0 0 1 1 1 0 RNHCP domain zf-FPG_IleRS PF06827.14 ORF82776 - 0.058 13.3 0.0 0.091 12.6 0.0 1.3 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS SRF-TF PF00319.18 ORF82580 - 1.5 8.4 9.5 7.8 6.1 5.6 2.2 2 0 0 2 2 2 0 SRF-type transcription factor (DNA-binding and dimerisation domain) CLLAC PF15675.5 ORF82085 - 0.51 9.9 4.2 0.79 9.3 4.2 1.3 1 0 0 1 1 1 0 CLLAC-motif containing domain Cys_rich_CWC PF14375.6 ORF81810 - 0.054 13.9 0.7 0.071 13.5 0.7 1.4 1 1 0 1 1 1 0 Cysteine-rich CWC Macoilin PF09726.9 ORF81767 - 0.0011 17.6 5.0 0.0013 17.4 5.0 1.0 1 0 0 1 1 1 1 Macoilin family LisH_2 PF16045.5 ORF8137 - 0.15 11.1 0.2 0.93 8.6 0.0 2.0 2 0 0 2 2 2 0 LisH DUF5101 PF17031.5 ORF81173 - 0.024 14.7 1.5 0.026 14.6 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) Herpes_UL73 PF03554.13 ORF81107 - 8.6 6.5 12.0 1.2 9.2 1.8 2.1 1 1 1 2 2 2 0 UL73 viral envelope glycoprotein DUF2883 PF11097.8 ORF80460 - 0.0083 16.2 0.0 0.0094 16.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2883) Ntox10 PF15520.6 ORF80084 - 0.08 12.8 0.1 0.08 12.8 0.1 1.1 1 0 0 1 1 1 0 Novel toxin 10 FAM150 PF15129.6 ORF78783 - 0.025 14.7 0.1 0.028 14.6 0.1 1.1 1 0 0 1 1 1 0 FAM150 family TFIIIC_sub6 PF10419.9 ORF78394 - 0.09 12.7 0.0 0.09 12.7 0.0 1.2 1 0 0 1 1 1 0 TFIIIC subunit triple barrel domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks436.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks436.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks436.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks436.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:44:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_L36 PF00444.18 ORF77919 - 0.068 13.4 2.2 0.082 13.1 2.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L36 TMEM61 PF15105.6 ORF77580 - 0.22 11.3 1.0 0.25 11.2 1.0 1.1 1 0 0 1 1 1 0 TMEM61 protein family Fucose_iso_C PF02952.17 ORF76994 - 0.085 12.6 0.0 0.098 12.4 0.0 1.0 1 0 0 1 1 1 0 L-fucose isomerase, C-terminal domain TPK_catalytic PF04263.16 ORF76954 - 0.042 13.9 0.3 0.048 13.7 0.3 1.1 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain Antimicrobial25 PF16839.5 ORF76628 - 0.036 14.1 0.7 0.049 13.7 0.7 1.3 1 0 0 1 1 1 0 Nematode antimicrobial peptide CAP-ZIP_m PF15255.6 ORF75947 - 0.013 15.7 0.1 0.014 15.6 0.1 1.1 1 0 0 1 1 1 0 WASH complex subunit CAP-Z interacting, central region NapE PF06796.11 ORF75918 - 0.016 14.8 0.0 0.026 14.0 0.0 1.3 1 0 0 1 1 1 0 Periplasmic nitrate reductase protein NapE SIR2 PF02146.17 ORF75741 - 0.29 11.1 2.6 0.3 11.0 2.6 1.0 1 0 0 1 1 1 0 Sir2 family RecO_C PF02565.15 ORF75211 - 0.021 14.7 0.3 0.023 14.5 0.3 1.0 1 0 0 1 1 1 0 Recombination protein O C terminal CS PF04969.16 ORF75135 - 0.032 15.3 0.2 0.038 15.0 0.2 1.1 1 0 0 1 1 1 0 CS domain SNF PF00209.18 ORF74809 - 1.2e-05 24.3 1.0 1.2e-05 24.2 1.0 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family DUF3537 PF12056.8 ORF74271 - 0.037 12.9 0.3 0.036 12.9 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3537) T_cell_tran_alt PF15128.6 ORF74129 - 0.082 12.7 0.2 0.089 12.6 0.2 1.1 1 0 0 1 1 1 0 T-cell leukemia translocation-altered Gastrin PF00918.17 ORF74052 - 0.21 12.5 0.0 0.23 12.4 0.0 1.1 1 0 0 1 1 1 0 Gastrin/cholecystokinin family DUF5433 PF17498.2 ORF73848 - 1.9 8.8 7.5 10 6.4 1.7 2.5 2 1 1 3 3 3 0 Family of unknown function (DUF5433) DUF2628 PF10947.8 ORF73592 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) HHH_6 PF14579.6 ORF73477 - 0.013 15.7 0.0 0.014 15.6 0.0 1.0 1 0 0 1 1 1 0 Helix-hairpin-helix motif SfsA_N PF17746.1 ORF73276 - 0.2 11.8 2.1 1 9.6 0.0 2.0 2 0 0 2 2 2 0 SfsA N-terminal OB domain NTF2 PF02136.20 ORF72811 - 0.16 12.5 0.0 0.17 12.5 0.0 1.0 1 0 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain Exonuc_V_gamma PF04257.14 ORF72721 - 0.038 12.2 0.1 0.038 12.2 0.1 1.0 1 0 0 1 1 1 0 Exodeoxyribonuclease V, gamma subunit IlvB_leader PF08049.11 ORF72684 - 0.12 12.4 2.2 0.28 11.1 2.2 1.6 1 0 0 1 1 1 0 IlvB leader peptide Defensin_4 PF07936.12 ORF72289 - 0.049 13.5 0.5 0.087 12.7 0.5 1.4 1 0 0 1 1 1 0 Potassium-channel blocking toxin R3H PF01424.22 ORF71931 - 0.0054 16.7 0.0 0.0069 16.4 0.0 1.2 1 0 0 1 1 1 1 R3H domain DUF2628 PF10947.8 ORF71898 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) UCR_hinge PF02320.16 ORF71515 - 0.081 13.1 0.3 0.11 12.7 0.3 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein T3SS_ExsE PF18286.1 ORF7122 - 0.051 13.5 0.0 0.089 12.7 0.0 1.4 1 0 0 1 1 1 0 Type III secretion system ExsE SVA PF05326.11 ORF71209 - 0.0074 16.3 0.9 0.0076 16.2 0.9 1.0 1 0 0 1 1 1 1 Seminal vesicle autoantigen (SVA) C5-epim_C PF06662.13 ORF71091 - 0.1 12.1 0.1 0.11 12.0 0.1 1.0 1 0 0 1 1 1 0 D-glucuronyl C5-epimerase C-terminus DUF863 PF05904.11 ORF71031 - 1.3 7.4 2.9 1.3 7.3 2.9 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF863) SKG6 PF08693.10 ORF70984 - 0.37 10.2 6.4 4.4 6.8 1.0 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain TPR_2 PF07719.17 ORF70960 - 0.018 15.1 0.3 0.026 14.6 0.3 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF1955 PF09205.10 ORF70075 - 0.17 11.6 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1955) DUF5313 PF17240.2 ORF68705 - 0.19 12.2 0.1 0.21 12.0 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Stimulus_sens_1 PF13756.6 ORF68618 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain pPIWI_RE_Z PF18155.1 ORF68155 - 0.075 12.9 0.3 0.084 12.7 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z FGFR3_TM PF18123.1 ORF67875 - 0.7 9.5 5.9 0.69 9.5 3.5 2.2 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain IF4E PF01652.18 ORF67109 - 0.15 11.9 0.0 0.21 11.3 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic initiation factor 4E zf-H2C2_2 PF13465.6 ORF66765 - 3.8e-09 36.6 10.7 5.7e-05 23.4 1.8 2.2 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF66765 - 3.5e-07 30.3 12.2 3.7e-06 27.1 3.8 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF66765 - 9.5e-06 26.0 10.5 0.00017 22.1 1.9 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger PyrI_C PF02748.15 ORF66765 - 5.6e-05 23.0 3.3 0.049 13.5 0.2 2.1 2 0 0 2 2 2 2 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-H2C2_5 PF13909.6 ORF66765 - 0.00018 21.2 3.4 0.00018 21.2 3.4 2.5 2 0 0 2 2 2 1 C2H2-type zinc-finger domain zf-CHCC PF10276.9 ORF66765 - 0.0018 18.3 2.9 0.062 13.4 0.6 2.2 2 0 0 2 2 2 1 Zinc-finger domain zf-AN1 PF01428.16 ORF66765 - 0.0027 17.8 2.9 0.16 12.2 0.3 2.2 2 0 0 2 2 2 1 AN1-like Zinc finger zinc_ribbon_9 PF14369.6 ORF66765 - 0.0057 16.9 0.4 1.6 9.1 0.0 2.1 2 0 0 2 2 2 1 zinc-ribbon zf-C2H2_6 PF13912.6 ORF66765 - 0.0059 16.6 1.1 0.0059 16.6 1.1 2.5 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF66765 - 0.023 15.4 4.2 0.049 14.3 0.7 1.9 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats Zn-ribbon_8 PF09723.10 ORF66765 - 0.03 14.4 2.2 2.8 8.2 0.1 2.1 2 0 0 2 2 2 0 Zinc ribbon domain zf-Dof PF02701.15 ORF66765 - 0.044 13.9 4.9 0.99 9.6 1.0 2.1 1 1 1 2 2 2 0 Dof domain, zinc finger zf-Di19 PF05605.12 ORF66765 - 0.11 12.8 4.5 0.44 10.9 4.5 1.8 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zinc-ribbons_6 PF07191.12 ORF66765 - 0.13 12.3 3.2 0.62 10.1 3.2 1.8 1 1 0 1 1 1 0 zinc-ribbons zf-C2H2_2 PF12756.7 ORF66765 - 0.14 12.5 5.3 0.4 11.0 0.4 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-BED PF02892.15 ORF66765 - 0.18 11.9 7.6 0.57 10.2 1.1 2.2 1 1 1 2 2 2 0 BED zinc finger FYVE PF01363.21 ORF66765 - 0.36 11.0 7.7 1.2 9.3 6.7 1.9 1 1 0 1 1 1 0 FYVE zinc finger zf-met PF12874.7 ORF66765 - 1.2 9.7 9.4 0.3 11.5 1.5 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Actin_micro PF17003.5 ORF66765 - 2 7.5 5.2 5.6 6.0 0.4 2.0 1 1 1 2 2 2 0 Putative actin-like family zf_PR_Knuckle PF18445.1 ORF66300 - 0.47 10.3 2.3 0.71 9.7 2.3 1.3 1 0 0 1 1 1 0 PR zinc knuckle motif FTH PF01827.27 ORF65673 - 0.055 13.3 0.0 0.055 13.3 0.0 1.0 1 0 0 1 1 1 0 FTH domain DUF1415 PF07209.12 ORF65570 - 0.061 13.1 0.1 0.064 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1415) DUF4477 PF14780.6 ORF65128 - 0.03 13.9 0.6 0.031 13.9 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4477) HTH_39 PF14090.6 ORF64805 - 0.043 13.6 0.1 0.062 13.1 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain PAP_central PF04928.17 ORF64657 - 0.0086 15.1 0.8 0.0087 15.1 0.8 1.0 1 0 0 1 1 1 1 Poly(A) polymerase central domain UCR_hinge PF02320.16 ORF64657 - 0.018 15.3 0.3 0.02 15.1 0.3 1.1 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein HrcA_DNA-bdg PF03444.15 ORF64657 - 0.04 13.6 1.4 0.045 13.4 1.4 1.1 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ocr PF08684.10 ORF64584 - 0.03 14.8 0.0 0.032 14.7 0.0 1.1 1 0 0 1 1 1 0 DNA mimic ocr DUF4489 PF14879.6 ORF63889 - 0.16 12.1 0.3 0.15 12.2 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4489) Rtf2 PF04641.12 ORF63811 - 0.013 14.8 12.1 0.014 14.8 12.1 1.0 1 0 0 1 1 1 0 Rtf2 RING-finger MATalpha_HMGbox PF04769.12 ORF63811 - 0.31 10.3 8.4 0.36 10.1 8.4 1.0 1 0 0 1 1 1 0 Mating-type protein MAT alpha 1 HMG-box DUF5101 PF17031.5 ORF63141 - 0.024 14.7 1.5 0.026 14.6 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) Myticin-prepro PF10690.9 ORF63103 - 8.6 6.7 9.7 13 6.1 9.7 1.3 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel TMEM52 PF14979.6 ORF62946 - 0.12 12.3 1.8 0.13 12.2 1.8 1.1 1 0 0 1 1 1 0 Transmembrane 52 DUF5433 PF17498.2 ORF62849 - 1.9 8.8 7.5 10 6.4 1.7 2.5 2 1 1 3 3 3 0 Family of unknown function (DUF5433) BDV_P24 PF06595.11 ORF62703 - 0.21 11.5 2.1 0.21 11.5 2.1 1.1 1 0 0 1 1 1 0 Borna disease virus P24 protein DUF1459 PF07312.11 ORF62674 - 0.047 13.9 3.5 0.053 13.7 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1459) TetR_C_29 PF17938.1 ORF62650 - 0.064 13.3 0.0 0.077 13.1 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF2615 PF11027.8 ORF62535 - 0.24 11.5 0.0 0.26 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) MCLC PF05934.11 ORF62435 - 0.36 9.5 1.6 0.37 9.5 1.6 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Hep_core_N PF08290.11 ORF62342 - 0.057 13.4 1.7 0.088 12.8 1.7 1.2 1 0 0 1 1 1 0 Hepatitis core protein, putative zinc finger ExsD PF16806.5 ORF61549 - 0.16 11.8 0.4 0.18 11.7 0.4 1.0 1 0 0 1 1 1 0 Antiactivator protein ExsD Antimicrobial25 PF16839.5 ORF60658 - 0.036 14.1 0.7 0.049 13.7 0.7 1.3 1 0 0 1 1 1 0 Nematode antimicrobial peptide DUF2628 PF10947.8 ORF60444 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) AZUL PF16558.5 ORF60156 - 0.14 12.4 3.3 0.18 12.1 3.3 1.1 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A BaxI_1 PF12811.7 ORF60061 - 0.14 11.7 2.7 0.14 11.7 2.7 1.1 1 0 0 1 1 1 0 Bax inhibitor 1 like MPS-4 PF17523.2 ORF60061 - 1.1 9.4 8.8 1.3 9.1 8.8 1.1 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF2628 PF10947.8 ORF59500 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) YrvL PF14184.6 ORF59230 - 0.029 14.5 2.9 0.032 14.3 2.9 1.0 1 0 0 1 1 1 0 Regulatory protein YrvL DUF1564 PF07600.11 ORF59216 - 0.03 14.0 0.0 0.032 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) TMEM132D_C PF15706.5 ORF59156 - 0.075 12.8 1.0 0.095 12.5 1.0 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term BILBO1_N PF18281.1 ORF58920 - 0.089 13.2 0.1 0.089 13.2 0.1 1.1 1 0 0 1 1 1 0 BILBO1 N-terminal domain DUF2070 PF09843.9 ORF58899 - 1.6 6.9 5.6 1.9 6.7 5.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) HTH_Tnp_Tc3_1 PF11427.8 ORF58878 - 0.0076 16.1 0.5 0.011 15.6 0.5 1.3 1 0 0 1 1 1 1 Tc3 transposase Stimulus_sens_1 PF13756.6 ORF58785 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain TMEM95 PF15203.6 ORF58322 - 0.0053 16.4 1.4 0.0061 16.2 1.4 1.0 1 0 0 1 1 1 1 TMEM95 family DUF4251 PF14059.6 ORF57872 - 0.045 13.7 0.5 0.05 13.6 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4251) TILa PF12714.7 ORF57643 - 0.0024 17.8 6.4 0.0024 17.8 6.4 1.5 1 1 0 1 1 1 1 TILa domain Secretin_N_2 PF07655.13 ORF57619 - 0.043 14.4 5.6 0.57 10.8 0.0 2.0 2 0 0 2 2 2 0 Secretin N-terminal domain TIP49_C PF17856.1 ORF5755 - 0.11 12.7 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 TIP49 AAA-lid domain DUF3932 PF13068.6 ORF5738 - 0.15 12.4 4.5 0.55 10.5 4.5 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3932) CCB1 PF12046.8 ORF5715 - 0.24 10.8 1.9 0.22 10.9 1.9 1.1 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B Dehydratase_MU PF02288.15 ORF56987 - 0.009 15.9 0.0 0.0093 15.8 0.0 1.0 1 0 0 1 1 1 1 Dehydratase medium subunit AXIN1_TNKS_BD PF16646.5 ORF56987 - 0.023 15.6 0.1 0.025 15.5 0.1 1.1 1 0 0 1 1 1 0 Axin-1 tankyrase binding domain CCER1 PF15482.6 ORF56257 - 0.82 9.5 2.7 0.86 9.5 2.7 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 MTTB PF06253.11 ORF55665 - 0.027 12.5 0.0 0.028 12.4 0.0 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) MscS_TM PF12794.7 ORF55403 - 0.1 11.4 0.8 0.11 11.3 0.8 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 MgrB PF13998.6 ORF55297 - 2.3e-18 65.7 4.6 3.3e-18 65.2 4.6 1.2 1 0 0 1 1 1 1 MgrB protein DUF5063 PF16702.5 ORF55116 - 0.15 12.5 0.2 0.16 12.4 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5063) DFP PF04127.15 ORF54284 - 2.9e-08 33.8 0.0 3e-08 33.7 0.0 1.0 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein adh_short_C2 PF13561.6 ORF54240 - 4.6e-10 39.4 0.0 4.9e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Vta1_C PF18097.1 ORF5383 - 1.7e-09 37.2 0.7 9e-09 34.9 0.2 1.9 1 1 1 2 2 2 2 Vta1 C-terminal domain zf-U1 PF06220.12 ORF53814 - 0.16 11.8 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 U1 zinc finger AT_hook PF02178.19 ORF53320 - 0.079 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 AT hook motif PolC_DP2 PF03833.13 ORF53190 - 0.63 7.8 3.7 0.71 7.7 3.7 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF898 PF05987.13 ORF53172 - 0.039 13.0 1.9 0.036 13.1 1.9 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) Pkinase PF00069.25 ORF53060 - 2.5e-16 59.8 0.2 2.7e-16 59.8 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF53060 - 3.4e-12 46.2 0.1 3.5e-12 46.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF53060 - 0.00045 19.6 0.0 0.00047 19.6 0.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family TMEM95 PF15203.6 ORF52886 - 0.023 14.3 1.7 0.026 14.2 1.7 1.1 1 0 0 1 1 1 0 TMEM95 family AAA_assoc PF14363.6 ORF52884 - 0.17 12.2 0.0 0.18 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain associated at C-terminal with AAA RSN1_TM PF13967.6 ORF52541 - 0.018 14.8 2.1 0.019 14.8 2.1 1.0 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport PDEase_I_N PF08499.12 ORF52076 - 0.21 11.4 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 3'5'-cyclic nucleotide phosphodiesterase N-terminal C1_1 PF00130.22 ORF51759 - 0.062 13.2 1.3 0.062 13.2 1.3 2.3 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) HTH_23 PF13384.6 ORF51421 - 0.058 13.2 1.0 0.066 13.0 1.0 1.1 1 0 0 1 1 1 0 Homeodomain-like domain PhoLip_ATPase_N PF16209.5 ORF51400 - 0.0032 17.1 4.6 0.0035 17.0 4.6 1.2 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal Lysis_col PF02402.16 ORF51322 - 0.96 9.2 4.9 0.21 11.3 1.1 1.8 2 0 0 2 2 2 0 Lysis protein MORN PF02493.20 ORF50791 - 1.2e-11 43.8 12.3 2.4e-05 24.0 1.8 3.1 3 0 0 3 3 3 3 MORN repeat ANAPC16 PF17256.2 ORF50639 - 0.066 13.6 0.0 0.094 13.1 0.0 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex, subunit 16 RNA_pol_L PF01193.24 ORF49670 - 0.0085 15.5 0.0 0.012 15.1 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain DUF3797 PF12677.7 ORF49458 - 0.012 15.5 0.4 0.016 15.0 0.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3797) CAF1 PF04857.20 ORF49458 - 0.24 10.5 1.0 0.26 10.4 1.0 1.0 1 0 0 1 1 1 0 CAF1 family ribonuclease MTTB PF06253.11 ORF49437 - 0.027 12.5 0.0 0.028 12.4 0.0 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) DUF1229 PF06797.11 ORF49155 - 0.1 12.8 0.0 0.11 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1229) FAM150 PF15129.6 ORF48322 - 0.025 14.7 0.1 0.028 14.6 0.1 1.1 1 0 0 1 1 1 0 FAM150 family DDE_Tnp_1_2 PF13586.6 ORF4831 - 0.03 14.7 0.1 0.035 14.5 0.1 1.1 1 0 0 1 1 1 0 Transposase DDE domain ADH_zinc_N_2 PF13602.6 ORF4822 - 0.015 16.4 0.0 0.015 16.4 0.0 1.1 1 0 0 1 1 1 0 Zinc-binding dehydrogenase zinc_ribbon_11 PF11682.8 ORF47811 - 0.048 13.7 0.1 0.058 13.4 0.1 1.1 1 0 0 1 1 1 0 Probable zinc-ribbon Tmemb_9 PF05434.11 ORF47799 - 0.23 11.3 1.9 0.27 11.1 1.9 1.1 1 0 0 1 1 1 0 TMEM9 DUF995 PF06191.12 ORF47736 - 0.024 14.3 1.6 0.026 14.2 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF995) GerE PF00196.19 ORF47561 - 0.078 12.5 0.1 0.096 12.3 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DUF2628 PF10947.8 ORF46475 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) DUF1688 PF07958.11 ORF45887 - 0.078 11.7 0.2 0.082 11.6 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1688) SIR2 PF02146.17 ORF45687 - 0.29 11.1 2.6 0.3 11.0 2.6 1.0 1 0 0 1 1 1 0 Sir2 family BCMA-Tall_bind PF09257.10 ORF45572 - 1.1 9.4 11.8 0.83 9.8 9.4 2.1 2 1 0 2 2 2 0 BCMA, TALL-1 binding cEGF PF12662.7 ORF45418 - 0.079 12.9 0.5 0.31 11.0 0.2 2.1 2 1 0 2 2 2 0 Complement Clr-like EGF-like Na_K-ATPase PF00287.18 ORF45197 - 0.43 9.7 1.0 0.47 9.6 1.0 1.0 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Matrilin_ccoil PF10393.9 ORF45122 - 0.53 10.2 0.1 0.53 10.2 0.1 2.2 3 0 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin MBD PF01429.19 ORF44471 - 0.16 11.7 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Methyl-CpG binding domain Fungus-induced PF10917.8 ORF44057 - 0.12 12.7 0.3 0.16 12.3 0.3 1.2 1 0 0 1 1 1 0 Fungus-induced protein DHHC PF01529.20 ORF43843 - 0.17 12.0 0.6 0.21 11.7 0.6 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase DnaB_bind PF10410.9 ORF43093 - 0.096 12.9 0.1 0.13 12.5 0.1 1.2 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase DUF2628 PF10947.8 ORF42869 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Keratin_B2_2 PF13885.6 ORF42681 - 0.12 12.3 8.7 0.3 11.1 8.6 1.7 1 1 0 1 1 1 0 Keratin, high sulfur B2 protein DUF4347 PF14252.6 ORF42586 - 0.0097 15.8 0.6 0.011 15.5 0.6 1.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4347) GST_C_3 PF14497.6 ORF42571 - 0.00032 20.9 0.0 0.00036 20.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF42571 - 0.0015 18.7 0.0 0.0018 18.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain RINGv PF12906.7 ORF42508 - 0.037 14.1 4.2 0.048 13.8 4.2 1.3 1 0 0 1 1 1 0 RING-variant domain DUF2935 PF11155.8 ORF42501 - 0.025 14.9 0.5 0.027 14.8 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2935) HTH_Tnp_IS1 PF12759.7 ORF42212 - 0.1 12.2 0.0 0.13 11.8 0.0 1.1 1 0 0 1 1 1 0 InsA C-terminal domain NYD-SP28 PF14772.6 ORF4184 - 0.021 14.9 7.4 0.031 14.3 7.4 1.3 1 1 0 1 1 1 0 Sperm tail La PF05383.17 ORF4184 - 0.035 14.1 0.4 0.045 13.8 0.4 1.3 1 0 0 1 1 1 0 La domain CHCH PF06747.13 ORF4035 - 0.034 14.3 1.4 0.071 13.3 1.4 1.6 1 0 0 1 1 1 0 CHCH domain FKS1_dom1 PF14288.6 ORF40255 - 0.015 15.6 0.2 0.016 15.6 0.2 1.1 1 0 0 1 1 1 0 1,3-beta-glucan synthase subunit FKS1, domain-1 CNOT11 PF10155.9 ORF39334 - 0.031 14.4 0.4 0.032 14.4 0.4 1.1 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 CobW_C PF07683.14 ORF39128 - 4.1e-09 36.3 0.0 4.4e-09 36.1 0.0 1.0 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain CitX PF03802.14 ORF39128 - 0.004 16.9 0.2 0.0048 16.7 0.2 1.1 1 0 0 1 1 1 1 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Sin_N PF04801.13 ORF39005 - 0.012 14.8 0.1 0.012 14.8 0.1 1.0 1 0 0 1 1 1 0 Sin-like protein conserved region DUF3290 PF11694.8 ORF38684 - 0.0043 17.0 0.3 0.0049 16.8 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3290) Bap31_Bap29_C PF18035.1 ORF38227 - 0.048 13.7 0.0 0.071 13.1 0.0 1.3 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain DUF5101 PF17031.5 ORF37414 - 0.024 14.7 1.5 0.026 14.6 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) EBV-NA3 PF05009.12 ORF36736 - 0.1 12.1 1.5 0.11 12.0 1.5 1.0 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) Circo_capsid PF02443.15 ORF36736 - 0.11 12.0 4.3 0.12 11.9 4.3 1.0 1 0 0 1 1 1 0 Circovirus capsid protein Hyr1 PF15789.5 ORF35032 - 0.011 15.2 1.0 0.021 14.4 1.0 1.4 1 0 0 1 1 1 0 Hyphally regulated cell wall GPI-anchored protein 1 OTT_1508_deam PF14441.6 ORF34955 - 0.53 10.3 6.0 0.28 11.2 4.4 1.5 1 1 0 1 1 1 0 OTT_1508-like deaminase SLC3A2_N PF16028.5 ORF34639 - 0.33 10.5 1.3 0.41 10.2 1.3 1.2 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Stimulus_sens_1 PF13756.6 ORF34523 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain Abhydrolase_4 PF08386.10 ORF34448 - 0.12 12.5 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 TAP-like protein UCR_hinge PF02320.16 ORF34396 - 0.081 13.1 0.3 0.11 12.7 0.3 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase hinge protein TGF_beta_GS PF08515.12 ORF33677 - 0.059 12.9 1.2 0.1 12.1 1.2 1.3 1 0 0 1 1 1 0 Transforming growth factor beta type I GS-motif DUF4884 PF16225.5 ORF3299 - 0.018 15.1 0.4 0.025 14.7 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4884) Sec66 PF09802.9 ORF32309 - 0.11 12.1 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 Preprotein translocase subunit Sec66 Actin PF00022.19 ORF32274 - 1.1e-25 90.1 0.0 1.2e-25 90.0 0.0 1.0 1 0 0 1 1 1 1 Actin PipA PF07108.11 ORF31427 - 0.12 11.9 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 PipA protein MoaF PF10703.9 ORF31333 - 0.0056 16.6 0.0 0.0062 16.5 0.0 1.0 1 0 0 1 1 1 1 MoaF N-terminal domain p450 PF00067.22 ORF31143 - 3.7e-11 42.4 0.0 3.8e-11 42.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 FBA_1 PF07734.13 ORF30508 - 0.0049 16.8 0.3 0.0049 16.8 0.3 1.1 1 0 0 1 1 1 1 F-box associated HTH_Tnp_Tc3_1 PF11427.8 ORF30364 - 0.0076 16.1 0.5 0.011 15.6 0.5 1.3 1 0 0 1 1 1 1 Tc3 transposase pPIWI_RE_Z PF18155.1 ORF29552 - 0.086 12.7 0.3 0.099 12.5 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z Stealth_CR1 PF17101.5 ORF29526 - 0.14 11.9 0.1 0.23 11.2 0.1 1.4 1 0 0 1 1 1 0 Stealth protein CR1, conserved region 1 DUF3931 PF13082.6 ORF29486 - 0.085 13.0 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3931) YlaC PF10777.9 ORF29453 - 0.24 11.2 2.5 0.26 11.1 2.5 1.0 1 0 0 1 1 1 0 Inner membrane protein YlaC Pilin_N PF07790.11 ORF29406 - 0.075 14.0 0.7 0.1 13.5 0.7 1.4 1 1 0 1 1 1 0 Archaeal Type IV pilin, N-terminal CCER1 PF15482.6 ORF28766 - 0.82 9.5 2.7 0.86 9.5 2.7 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 PhoLip_ATPase_N PF16209.5 ORF28418 - 0.0032 17.1 4.6 0.0035 17.0 4.6 1.2 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal SOTI PF17079.5 ORF28416 - 0.081 13.3 0.2 0.092 13.2 0.2 1.1 1 0 0 1 1 1 0 Male-specific protein scotti MoaF PF10703.9 ORF28211 - 0.0056 16.6 0.0 0.0062 16.5 0.0 1.0 1 0 0 1 1 1 1 MoaF N-terminal domain NrsF PF06532.11 ORF28116 - 0.12 12.1 0.2 0.12 12.0 0.2 1.0 1 0 0 1 1 1 0 Negative regulator of sigma F Actin PF00022.19 ORF2810 - 1.1e-25 90.1 0.0 1.2e-25 90.0 0.0 1.0 1 0 0 1 1 1 1 Actin Wtap PF17098.5 ORF28092 - 0.1 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 WTAP/Mum2p family Tetrabrachion PF11401.8 ORF28001 - 0.055 13.5 0.4 0.071 13.1 0.2 1.3 1 1 0 1 1 1 0 Tetrabrachion Ppx-GppA PF02541.16 ORF28001 - 0.076 12.4 0.1 0.085 12.3 0.1 1.0 1 0 0 1 1 1 0 Ppx/GppA phosphatase family LRRNT PF01462.18 ORF27787 - 0.036 13.7 1.4 0.036 13.7 1.4 2.1 2 1 0 2 2 2 0 Leucine rich repeat N-terminal domain Stimulus_sens_1 PF13756.6 ORF27389 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain Orn_DAP_Arg_deC PF00278.22 ORF2707 - 0.053 13.8 0.0 0.054 13.7 0.0 1.1 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Trans_reg_C PF00486.28 ORF26544 - 8e-23 80.3 0.3 8.7e-23 80.2 0.3 1.0 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal HAP2-GCS1 PF10699.9 ORF26327 - 0.0069 16.3 0.1 0.047 13.7 0.0 1.9 2 0 0 2 2 2 1 Male gamete fusion factor MutS_II PF05188.17 ORF25975 - 0.18 12.1 0.0 0.19 12.0 0.0 1.1 1 0 0 1 1 1 0 MutS domain II Sulfotransfer_1 PF00685.27 ORF25121 - 0.049 13.1 0.2 0.049 13.1 0.2 1.1 1 0 0 1 1 1 0 Sulfotransferase domain DUF4446 PF14584.6 ORF2451 - 0.051 13.6 0.1 0.052 13.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4446) zf-RRPl_C4 PF17026.5 ORF24446 - 0.13 12.4 4.5 0.15 12.2 4.5 1.1 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type FAM150 PF15129.6 ORF24209 - 0.025 14.7 0.1 0.028 14.6 0.1 1.1 1 0 0 1 1 1 0 FAM150 family DUF1987 PF09345.10 ORF23686 - 0.075 12.7 0.0 0.079 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) DUF5463 PF17551.2 ORF22894 - 1.3 9.0 7.8 0.91 9.5 0.9 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5463) FragX_IP PF05994.11 ORF2281 - 0.0074 14.4 0.2 0.0077 14.4 0.2 1.0 1 0 0 1 1 1 1 Cytoplasmic Fragile-X interacting family PriA_CRR PF18319.1 ORF2279 - 0.14 12.2 2.4 0.14 12.2 2.4 2.1 1 1 1 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain Exog_C PF18026.1 ORF22550 - 0.21 11.7 4.1 0.6 10.2 2.2 2.1 1 1 1 2 2 2 0 Endo/exonuclease (EXOG) C-terminal domain RNHCP PF12647.7 ORF21922 - 0.042 13.8 0.1 0.048 13.6 0.1 1.1 1 0 0 1 1 1 0 RNHCP domain DUF4093 PF13331.6 ORF21920 - 0.026 15.0 1.0 0.031 14.7 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) Ta0938 PF11494.8 ORF20162 - 0.033 14.4 0.4 3.1 8.1 0.0 2.0 1 1 1 2 2 2 0 Ta0938 Pfg27 PF09216.10 ORF19844 - 0.0035 17.2 2.7 0.0041 17.0 2.5 1.3 1 1 0 1 1 1 1 Pfg27 Rad1 PF02144.16 ORF1968 - 0.091 11.8 0.1 0.091 11.8 0.1 1.1 1 0 0 1 1 1 0 Repair protein Rad1/Rec1/Rad17 Limkain-b1 PF11608.8 ORF19603 - 0.041 13.9 0.2 0.043 13.9 0.2 1.1 1 0 0 1 1 1 0 Limkain b1 Fusion_gly PF00523.18 ORF19361 - 0.0077 14.5 0.5 0.0084 14.4 0.5 1.0 1 0 0 1 1 1 1 Fusion glycoprotein F0 TMEM132D_C PF15706.5 ORF18486 - 0.075 12.8 1.0 0.095 12.5 1.0 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Inositol_P PF00459.25 ORF18196 - 0.023 14.2 0.0 0.023 14.2 0.0 1.0 1 0 0 1 1 1 0 Inositol monophosphatase family PyrBI_leader PF08052.11 ORF18096 - 8.5e-34 115.3 5.4 8.5e-34 115.3 5.4 1.6 2 0 0 2 2 2 1 PyrBI operon leader peptide KNTase_C PF07827.11 ORF17928 - 0.035 13.9 0.1 0.04 13.7 0.1 1.0 1 0 0 1 1 1 0 KNTase C-terminal domain Maelstrom PF13017.6 ORF17928 - 0.058 13.0 0.6 0.057 13.1 0.6 1.0 1 0 0 1 1 1 0 piRNA pathway germ-plasm component CoA_binding_3 PF13727.6 ORF17913 - 8.6 6.3 9.6 9.4 6.2 9.6 1.0 1 0 0 1 1 1 0 CoA-binding domain Stimulus_sens_1 PF13756.6 ORF17355 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain Toxin_32 PF08120.11 ORF1711 - 0.018 14.9 0.1 0.018 14.9 0.1 1.7 2 0 0 2 2 2 0 Tamulustoxin family FRB_dom PF08771.11 ORF16715 - 0.032 14.7 0.2 0.033 14.6 0.2 1.1 1 0 0 1 1 1 0 FKBP12-rapamycin binding domain LELP1 PF15042.6 ORF16020 - 0.028 14.8 3.2 0.033 14.6 3.2 1.2 1 0 0 1 1 1 0 Late cornified envelope-like proline-rich protein 1 Ac76 PF05814.11 ORF152396 - 0.03 14.3 0.1 0.031 14.3 0.1 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) Pox_A14 PF05767.12 ORF152113 - 0.038 14.1 0.9 0.044 13.9 0.9 1.2 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 KaiA PF07688.12 ORF151708 - 0.044 13.9 0.5 0.046 13.9 0.5 1.1 1 0 0 1 1 1 0 KaiA C-terminal domain HMw1_D2 PF18254.1 ORF151470 - 0.071 13.5 0.0 0.071 13.5 0.0 1.1 1 0 0 1 1 1 0 HMW1 domain 2 ATP-synt_8 PF00895.20 ORF151140 - 0.11 13.0 1.1 0.16 12.4 1.1 1.3 1 0 0 1 1 1 0 ATP synthase protein 8 DBC1 PF14443.6 ORF151083 - 0.16 11.9 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 DBC1 VSP PF03302.13 ORF150920 - 0.0078 15.1 4.9 0.0085 15.0 4.9 1.0 1 0 0 1 1 1 1 Giardia variant-specific surface protein DUF5101 PF17031.5 ORF150850 - 0.024 14.7 1.5 0.026 14.6 1.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) TMEM132D_C PF15706.5 ORF150564 - 0.91 9.3 3.2 1.2 9.0 3.2 1.2 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term CpXC PF14353.6 ORF150020 - 0.034 14.2 0.3 0.039 14.0 0.3 1.1 1 0 0 1 1 1 0 CpXC protein DUF1415 PF07209.12 ORF149740 - 0.061 13.1 0.1 0.064 13.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1415) DDE_Tnp_1_2 PF13586.6 ORF149555 - 0.03 14.7 0.1 0.035 14.5 0.1 1.1 1 0 0 1 1 1 0 Transposase DDE domain DUF1328 PF07043.13 ORF149066 - 2.9e-13 49.8 23.6 3.6e-13 49.5 23.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1328) DUF3149 PF11346.8 ORF149066 - 0.023 14.3 0.8 0.023 14.3 0.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) DUF1435 PF07256.12 ORF149066 - 0.03 14.4 0.7 0.037 14.1 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1435) ThrE PF06738.12 ORF149066 - 0.051 12.9 4.4 0.054 12.8 4.4 1.0 1 0 0 1 1 1 0 Putative threonine/serine exporter Pox_A14 PF05767.12 ORF149066 - 0.2 11.8 4.4 0.26 11.5 4.4 1.2 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 IncE PF17627.2 ORF149066 - 0.32 11.0 6.0 0.36 10.9 6.0 1.0 1 0 0 1 1 1 0 Inclusion membrane protein E Phage_holin_3_6 PF07332.11 ORF149066 - 0.34 11.0 11.5 0.38 10.8 11.5 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 ORF149066 - 2.5 6.8 7.7 2.7 6.7 7.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FeoB_associated PF12669.7 ORF149066 - 5 7.6 7.8 14 6.2 0.5 2.2 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein CitMHS PF03600.16 ORF149066 - 6.3 5.9 9.6 6.8 5.8 9.6 1.0 1 0 0 1 1 1 0 Citrate transporter DUF1676 PF07898.13 ORF149066 - 8.4 6.4 8.0 9 6.3 8.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) FA_desaturase PF00487.24 ORF149066 - 8.9 6.1 6.3 9.6 6.0 6.3 1.0 1 0 0 1 1 1 0 Fatty acid desaturase Stimulus_sens_1 PF13756.6 ORF148961 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain TMIE PF16038.5 ORF148708 - 0.022 14.6 6.3 0.026 14.4 6.3 1.2 1 0 0 1 1 1 0 TMIE protein pPIWI_RE_Z PF18155.1 ORF148373 - 0.075 12.9 0.3 0.084 12.7 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z EKAL PF17986.1 ORF147516 - 0.024 14.7 0.6 0.031 14.3 0.6 1.3 1 0 0 1 1 1 0 EMP3-KAHRP-like N-terminal domain Blo-t-5 PF11642.8 ORF147516 - 0.036 14.1 2.2 0.039 13.9 2.2 1.0 1 0 0 1 1 1 0 Mite allergen Blo t 5 DUF4522 PF15022.6 ORF147516 - 0.049 13.9 0.7 0.049 13.9 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4522) Pox_A_type_inc PF04508.12 ORF147516 - 0.39 10.7 3.0 0.99 9.4 0.1 2.4 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat CENP-M PF11111.8 ORF146846 - 0.12 11.5 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Centromere protein M (CENP-M) ERGIC_N PF13850.6 ORF146396 - 0.0014 19.0 0.8 0.0018 18.6 0.8 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Baculo_11_kDa PF06143.11 ORF146396 - 0.023 14.2 1.6 0.024 14.2 1.6 1.1 1 0 0 1 1 1 0 Baculovirus 11 kDa family Toxin_5 PF05294.13 ORF145395 - 1.8 9.0 10.1 0.2 12.1 5.5 1.7 2 0 0 2 2 2 0 Scorpion short toxin MBD PF01429.19 ORF143946 - 0.16 11.7 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Methyl-CpG binding domain zf-CGNR PF11706.8 ORF143921 - 1.6 8.7 6.8 0.63 9.9 1.9 2.5 1 1 1 2 2 2 0 CGNR zinc finger Ogr_Delta PF04606.12 ORF143802 - 0.062 13.3 1.5 0.08 12.9 1.5 1.2 1 0 0 1 1 1 0 Ogr/Delta-like zinc finger DUF679 PF05078.12 ORF143653 - 0.01 15.8 0.4 0.01 15.8 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF679) RINGv PF12906.7 ORF143528 - 0.037 14.1 4.2 0.048 13.8 4.2 1.3 1 0 0 1 1 1 0 RING-variant domain zf-DBF PF07535.12 ORF143416 - 0.0059 16.7 1.9 0.013 15.6 1.9 1.5 1 0 0 1 1 1 1 DBF zinc finger PriX PF18689.1 ORF143234 - 0.076 13.4 0.9 0.15 12.4 0.6 1.6 1 1 1 2 2 2 0 Primase X Sigma70_r2 PF04542.14 ORF143234 - 0.14 11.9 1.2 0.69 9.7 0.0 2.0 2 0 0 2 2 2 0 Sigma-70 region 2 DUF2688 PF10892.8 ORF143078 - 0.012 15.1 0.2 0.03 13.8 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2688) Prok-RING_4 PF14447.6 ORF143078 - 0.013 15.3 1.0 0.017 15.0 0.3 1.5 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Stimulus_sens_1 PF13756.6 ORF142515 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain CHASE3 PF05227.13 ORF142468 - 0.0064 16.4 0.3 0.0077 16.1 0.3 1.1 1 0 0 1 1 1 1 CHASE3 domain DUF4093 PF13331.6 ORF141874 - 0.026 15.0 1.0 0.031 14.7 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) RGS12_us1 PF16613.5 ORF141413 - 0.04 14.2 0.1 0.048 14.0 0.1 1.1 1 0 0 1 1 1 0 Unstructured region of RGS12 DUF962 PF06127.11 ORF141001 - 2.5 8.3 5.8 2.9 8.0 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) pPIWI_RE_Z PF18155.1 ORF140269 - 0.075 12.9 0.3 0.084 12.7 0.3 1.1 1 0 0 1 1 1 0 pPIWI RE three-gene island domain Z PI3Ka PF00613.20 ORF140207 - 0.03 13.7 0.2 0.032 13.6 0.2 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) Phage_terminase PF10668.9 ORF140207 - 0.076 13.0 0.7 0.097 12.7 0.5 1.4 1 1 0 1 1 1 0 Phage terminase small subunit Lectin_C_term PF18022.1 ORF140001 - 0.085 13.3 0.7 0.11 13.0 0.7 1.1 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin C-terminal domain Kunitz_BPTI PF00014.23 ORF140001 - 0.3 11.3 4.1 0.42 10.9 4.1 1.3 1 0 0 1 1 1 0 Kunitz/Bovine pancreatic trypsin inhibitor domain DUF1201 PF06716.11 ORF139708 - 0.064 13.3 4.7 0.064 13.3 4.7 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1201) Rep_N PF08724.10 ORF13951 - 0.08 12.7 0.0 0.081 12.7 0.0 1.1 1 0 0 1 1 1 0 Rep protein catalytic domain like DUF1319 PF07028.11 ORF139309 - 0.026 14.7 0.3 0.028 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1319) NAD_binding_11 PF14833.6 ORF139143 - 0.092 13.0 0.0 0.099 12.9 0.0 1.1 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DUF5363 PF17320.2 ORF138676 - 0.12 12.3 0.1 0.44 10.5 0.2 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5363) Monellin PF09200.10 ORF138353 - 0.035 14.0 0.0 0.053 13.4 0.0 1.3 1 0 0 1 1 1 0 Monellin DUF679 PF05078.12 ORF138313 - 0.01 15.8 0.4 0.01 15.8 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF679) zf-RING_12 PF17976.1 ORF13799 - 0.017 15.4 0.7 0.021 15.1 0.7 1.1 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF5313 PF17240.2 ORF137851 - 0.2 12.1 0.6 0.22 12.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Asp4 PF16996.5 ORF137851 - 1.3 8.9 6.1 1.9 8.3 6.1 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ycf1 PF05758.12 ORF137851 - 3.1 5.6 7.5 3.1 5.5 7.5 1.0 1 0 0 1 1 1 0 Ycf1 IBV_3A PF03617.13 ORF137689 - 0.0043 17.0 4.6 0.0061 16.5 4.6 1.2 1 0 0 1 1 1 1 IBV 3A protein DUF5375 PF17345.2 ORF137453 - 0.12 12.3 0.3 0.12 12.3 0.3 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5375) Alpha-E PF04168.12 ORF13644 - 0.02 14.7 1.6 0.023 14.5 1.6 1.0 1 0 0 1 1 1 0 A predicted alpha-helical domain with a conserved ER motif. HTH_8 PF02954.19 ORF136157 - 1.7e-05 24.5 5.0 4.7e-05 23.1 4.1 2.1 1 1 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_50 PF18024.1 ORF136157 - 0.012 15.2 0.5 0.017 14.7 0.5 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_30 PF13556.6 ORF136157 - 0.066 13.0 0.1 0.09 12.6 0.1 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DUF3157 PF11355.8 ORF136157 - 0.15 11.7 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3157) P53_C PF11619.8 ORF134867 - 0.059 13.4 0.1 0.11 12.6 0.1 1.6 1 1 0 1 1 1 0 Transcription factor P53 - C terminal domain DUF1699 PF08004.11 ORF134771 - 0.022 14.4 0.2 0.023 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1699) Myticin-prepro PF10690.9 ORF134595 - 8.6 6.7 9.7 13 6.1 9.7 1.3 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel Furin-like_2 PF15913.5 ORF133769 - 0.0099 16.0 6.2 0.01 16.0 6.2 1.1 1 0 0 1 1 1 1 Furin-like repeat, cysteine-rich Atg14 PF10186.9 ORF133152 - 0.049 12.7 0.7 0.054 12.6 0.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF3269 PF11673.8 ORF133152 - 0.056 13.8 1.1 0.11 12.9 1.2 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3269) DUF4774 PF15999.5 ORF133098 - 0.1 12.4 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4774) CHAD PF05235.14 ORF13305 - 0.067 13.2 2.0 0.43 10.5 2.0 1.9 1 1 0 1 1 1 0 CHAD domain PRP21_like_P PF12230.8 ORF132985 - 0.046 13.6 0.0 0.047 13.6 0.0 1.0 1 0 0 1 1 1 0 Pre-mRNA splicing factor PRP21 like protein DUF4775 PF16001.5 ORF132985 - 0.058 12.8 0.7 0.055 12.9 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4775) DUF5313 PF17240.2 ORF132818 - 0.2 12.1 0.6 0.22 12.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Asp4 PF16996.5 ORF132818 - 1.3 8.9 6.1 1.9 8.3 6.1 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ycf1 PF05758.12 ORF132818 - 3.1 5.6 7.5 3.1 5.5 7.5 1.0 1 0 0 1 1 1 0 Ycf1 DUF3023 PF11224.8 ORF13263 - 0.072 12.9 0.1 0.096 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3023) Endomucin PF07010.12 ORF132547 - 0.035 14.1 0.1 0.04 13.9 0.1 1.0 1 0 0 1 1 1 0 Endomucin zf-C2H2_4 PF13894.6 ORF132462 - 0.0012 19.5 1.5 0.0021 18.7 1.5 1.4 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF132462 - 0.0014 19.0 1.6 0.0023 18.3 1.6 1.4 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 ORF132462 - 0.0058 16.6 1.5 0.0079 16.2 1.5 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-H2C2_5 PF13909.6 ORF132462 - 0.11 12.2 2.2 0.22 11.3 2.2 1.5 1 0 0 1 1 1 0 C2H2-type zinc-finger domain zf-H2C2_2 PF13465.6 ORF132462 - 4.7 7.8 8.4 6 7.5 3.8 2.3 2 1 0 2 2 2 0 Zinc-finger double domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks437.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks437.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks437.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks437.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Leader_Erm PF08253.11 ORF132424 - 3.9 8.0 0.0 3.9 8.0 0.0 2.9 3 1 0 3 3 3 0 Erm Leader peptide L31 PF09784.9 ORF131907 - 0.042 14.3 0.2 0.048 14.1 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 SSXRD PF09514.10 ORF13122 - 1.3 8.7 7.3 0.4 10.3 4.4 1.7 1 1 1 2 2 2 0 SSXRD motif LpxB PF02684.15 ORF130912 - 0.25 10.1 0.0 0.3 9.9 0.0 1.0 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase Ank_4 PF13637.6 ORF130572 - 6.2e-06 26.7 0.1 0.024 15.2 0.0 1.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF130572 - 3.5e-05 24.0 0.1 5.1e-05 23.5 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeat Ank_2 PF12796.7 ORF130572 - 4.2e-05 24.0 0.0 4.8e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF130572 - 0.00035 20.8 0.0 0.00037 20.7 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF130572 - 0.00081 19.7 0.0 0.0012 19.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeat AWS PF17907.1 ORF130499 - 0.014 15.4 1.9 0.021 14.9 1.9 1.4 1 0 0 1 1 1 0 AWS domain CRM1_repeat_2 PF18784.1 ORF130192 - 0.04 13.6 0.1 0.26 11.0 0.0 1.9 1 1 1 2 2 2 0 CRM1 / Exportin repeat 2 Popeye PF04831.13 ORF130192 - 0.064 13.4 0.8 0.085 13.0 0.8 1.3 1 1 0 1 1 1 0 Popeye protein conserved region DUF1987 PF09345.10 ORF129345 - 0.075 12.7 0.0 0.079 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) Myticin-prepro PF10690.9 ORF128075 - 8.6 6.7 9.7 13 6.1 9.7 1.3 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel DUF3287 PF11690.8 ORF127141 - 0.015 15.0 2.8 0.02 14.6 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) DUF898 PF05987.13 ORF127002 - 0.039 13.0 1.9 0.036 13.1 1.9 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF1364 PF07102.12 ORF126423 - 0.0037 17.1 0.7 0.0045 16.8 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1364) CART PF06373.11 ORF126423 - 0.099 12.8 6.2 0.11 12.7 5.8 1.4 1 1 0 1 1 1 0 Cocaine and amphetamine regulated transcript protein (CART) MTTB PF06253.11 ORF126382 - 0.027 12.5 0.0 0.028 12.4 0.0 1.0 1 0 0 1 1 1 0 Trimethylamine methyltransferase (MTTB) Poxvirus PF06227.12 ORF125972 - 0.095 12.5 0.3 0.12 12.1 0.3 1.3 1 0 0 1 1 1 0 dsDNA Poxvirus PALP PF00291.25 ORF125770 - 7.4e-06 25.6 0.5 8.3e-06 25.4 0.5 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PK_C PF02887.16 ORF125723 - 4.9e-05 23.5 0.0 5.2e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain PCSK9_C3 PF18463.1 ORF125195 - 0.0041 17.3 0.2 0.0041 17.3 0.2 1.2 1 0 0 1 1 1 1 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Ion_trans PF00520.31 ORF124561 - 0.033 13.4 0.7 0.034 13.4 0.7 1.0 1 0 0 1 1 1 0 Ion transport protein Stimulus_sens_1 PF13756.6 ORF124225 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain Cation_ATPase_N PF00690.26 ORF124172 - 0.17 11.6 0.0 0.25 11.1 0.0 1.2 1 0 0 1 1 1 0 Cation transporter/ATPase, N-terminus RasGAP PF00616.19 ORF124157 - 0.04 13.6 0.0 0.042 13.6 0.0 1.0 1 0 0 1 1 1 0 GTPase-activator protein for Ras-like GTPase L31 PF09784.9 ORF123704 - 0.042 14.3 0.2 0.048 14.1 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 SKG6 PF08693.10 ORF123546 - 0.37 10.2 6.4 4.4 6.8 1.0 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Stimulus_sens_1 PF13756.6 ORF123401 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain FAM150 PF15129.6 ORF123133 - 0.025 14.7 0.1 0.028 14.6 0.1 1.1 1 0 0 1 1 1 0 FAM150 family Excalibur PF05901.11 ORF123112 - 0.089 13.4 0.2 0.32 11.7 0.2 1.9 1 1 0 1 1 1 0 Excalibur calcium-binding domain EBV-NA3 PF05009.12 ORF122968 - 0.1 12.1 1.5 0.11 12.0 1.5 1.0 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) Circo_capsid PF02443.15 ORF122968 - 0.11 12.0 4.3 0.12 11.9 4.3 1.0 1 0 0 1 1 1 0 Circovirus capsid protein HXXEE PF13787.6 ORF122613 - 0.026 15.3 0.4 0.03 15.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif Stimulus_sens_1 PF13756.6 ORF122437 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain Stimulus_sens_1 PF13756.6 ORF121811 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain IRK_C PF17655.1 ORF121159 - 0.074 12.7 0.0 0.087 12.4 0.0 1.0 1 0 0 1 1 1 0 Inward rectifier potassium channel C-terminal domain DUF5063 PF16702.5 ORF120972 - 0.15 12.5 0.2 0.16 12.4 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5063) NTF2 PF02136.20 ORF120825 - 0.16 12.5 0.0 0.17 12.5 0.0 1.0 1 0 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain DUF5313 PF17240.2 ORF120650 - 0.2 12.1 0.6 0.22 12.0 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Asp4 PF16996.5 ORF120650 - 1.3 8.9 6.1 1.9 8.3 6.1 1.3 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 Ycf1 PF05758.12 ORF120650 - 3.1 5.6 7.5 3.1 5.5 7.5 1.0 1 0 0 1 1 1 0 Ycf1 GBR_NSP5 PF17580.2 ORF120630 - 0.018 14.9 0.7 0.02 14.7 0.7 1.0 1 0 0 1 1 1 0 Group B Rotavirus Non-structural protein 5 DUF1851 PF08906.11 ORF120630 - 0.13 12.2 0.0 0.24 11.4 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF1851) NMT1 PF09084.11 ORF120506 - 0.13 12.2 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 NMT1/THI5 like Matrilin_ccoil PF10393.9 ORF12045 - 0.53 10.2 0.1 0.53 10.2 0.1 2.2 3 0 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin KASH PF10541.9 ORF118855 - 0.66 10.3 7.1 1.3 9.4 7.1 1.5 1 1 0 1 1 1 0 Nuclear envelope localisation domain Whib PF02467.16 ORF118304 - 0.035 14.7 2.7 0.036 14.7 2.2 1.4 1 1 0 1 1 1 0 Transcription factor WhiB DUF570 PF04489.13 ORF118062 - 0.053 12.1 0.1 0.063 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF570) DUF1242 PF06842.12 ORF117866 - 0.043 13.6 2.2 0.063 13.1 2.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1242) Noelin-1 PF12308.8 ORF117627 - 0.0042 17.0 0.6 0.0052 16.7 0.6 1.1 1 0 0 1 1 1 1 Neurogenesis glycoprotein IML1 PF12257.8 ORF116965 - 0.077 12.1 0.0 0.077 12.1 0.0 1.1 1 0 0 1 1 1 0 Vacuolar membrane-associated protein Iml1 DUF4116 PF13475.6 ORF116439 - 0.024 14.3 1.4 0.038 13.7 1.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4116) LysR_substrate PF03466.20 ORF116205 - 0.00083 18.8 0.0 0.0009 18.7 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Methyltransf_16 PF10294.9 ORF115113 - 7.4e-05 22.5 0.0 7.9e-05 22.5 0.0 1.0 1 0 0 1 1 1 1 Lysine methyltransferase zf-FPG_IleRS PF06827.14 ORF113875 - 0.058 13.3 0.0 0.091 12.6 0.0 1.3 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS Transformer PF06495.11 ORF113121 - 9.5 6.3 14.7 11 6.1 14.7 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein Toxin_35 PF10530.9 ORF11311 - 0.27 11.3 5.4 0.24 11.4 4.4 1.5 1 1 0 1 1 1 0 Toxin with inhibitor cystine knot ICK or Knottin scaffold DUF2628 PF10947.8 ORF112749 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) CRISPR_Cas9_WED PF18061.1 ORF112304 - 0.046 13.8 0.1 0.051 13.7 0.1 1.1 1 0 0 1 1 1 0 CRISPR-Cas9 WED domain T3SS_ATPase_C PF18269.1 ORF112304 - 0.07 13.0 0.1 0.095 12.6 0.1 1.2 1 0 0 1 1 1 0 T3SS EscN ATPase C-terminal domain M16C_assoc PF08367.11 ORF112108 - 0.011 14.8 1.4 0.013 14.6 1.4 1.0 1 0 0 1 1 1 0 Peptidase M16C associated Fibroin_P25 PF07294.11 ORF112108 - 0.013 15.5 0.1 0.013 15.5 0.1 1.0 1 0 0 1 1 1 0 Fibroin P25 PH_17 PF18012.1 ORF112021 - 0.061 13.0 0.3 0.081 12.7 0.3 1.4 1 0 0 1 1 1 0 PH domain Copper-bind PF00127.20 ORF112021 - 0.086 13.3 0.1 0.086 13.3 0.1 1.1 1 0 0 1 1 1 0 Copper binding proteins, plastocyanin/azurin family DUF3399 PF11879.8 ORF111895 - 0.061 13.7 0.3 0.069 13.5 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) CAF1 PF04857.20 ORF111707 - 0.15 11.2 2.1 0.15 11.2 2.1 1.0 1 0 0 1 1 1 0 CAF1 family ribonuclease SafA PF17073.5 ORF111584 - 0.03 14.3 0.0 0.036 14.0 0.0 1.1 1 0 0 1 1 1 0 Two-component-system connector protein DUF1353 PF07087.11 ORF111516 - 0.078 12.7 0.1 0.089 12.5 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1353) Myticin-prepro PF10690.9 ORF11147 - 8.6 6.7 9.7 13 6.1 9.7 1.3 1 1 0 1 1 1 0 Myticin pre-proprotein from the mussel PI3K_1B_p101 PF10486.9 ORF111363 - 0.1 10.4 0.0 0.11 10.2 0.0 1.0 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit O-ag_pol_Wzy PF14296.6 ORF111104 - 0.67 8.5 8.8 0.77 8.3 8.8 1.0 1 0 0 1 1 1 0 O-antigen polysaccharide polymerase Wzy REC104 PF17378.2 ORF110713 - 0.048 13.5 0.2 0.055 13.3 0.2 1.1 1 0 0 1 1 1 0 Meiotic recombination protein REC104 zinc_ribbon_5 PF13719.6 ORF110685 - 0.056 13.2 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 zinc-ribbon domain NADH-G_4Fe-4S_3 PF10588.9 ORF110178 - 0.028 14.0 0.3 0.047 13.2 0.3 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region tRNA_int_endo_N PF02778.14 ORF110112 - 0.17 11.6 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 tRNA intron endonuclease, N-terminal domain Fer4_10 PF13237.6 ORF109743 - 0.014 15.5 0.2 0.017 15.2 0.2 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF109743 - 0.042 14.4 0.2 0.053 14.0 0.2 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain Ta0938 PF11494.8 ORF109267 - 0.033 14.4 0.4 3.1 8.1 0.0 2.0 1 1 1 2 2 2 0 Ta0938 DTC PF18102.1 ORF109137 - 0.14 12.3 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Deltex C-terminal domain Tup_N PF08581.10 ORF108996 - 0.01 16.2 0.8 0.015 15.6 0.8 1.3 1 0 0 1 1 1 1 Tup N-terminal Mei5 PF10376.9 ORF108996 - 0.011 15.7 2.1 0.012 15.5 2.1 1.0 1 0 0 1 1 1 0 Double-strand recombination repair protein HisKA_3 PF07730.13 ORF108996 - 0.02 15.4 0.7 0.024 15.2 0.7 1.1 1 0 0 1 1 1 0 Histidine kinase PKcGMP_CC PF16808.5 ORF108996 - 0.072 12.9 3.7 0.12 12.3 3.7 1.3 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase PTS_2-RNA PF01885.16 ORF108638 - 0.017 15.2 0.0 0.018 15.1 0.0 1.0 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family DUF2628 PF10947.8 ORF108020 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) CRISPR_Cas9_WED PF18061.1 ORF107843 - 0.046 13.8 0.1 0.051 13.7 0.1 1.1 1 0 0 1 1 1 0 CRISPR-Cas9 WED domain T3SS_ATPase_C PF18269.1 ORF107843 - 0.07 13.0 0.1 0.095 12.6 0.1 1.2 1 0 0 1 1 1 0 T3SS EscN ATPase C-terminal domain Stimulus_sens_1 PF13756.6 ORF107792 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain Cys_Knot_tox PF17486.2 ORF107780 - 0.014 15.6 0.3 0.018 15.2 0.3 1.1 1 0 0 1 1 1 0 Cystine knot toxins RnaseA PF00074.20 ORF107780 - 0.059 13.8 0.7 0.075 13.5 0.7 1.1 1 0 0 1 1 1 0 Pancreatic ribonuclease Sulfotransfer_1 PF00685.27 ORF10685 - 0.049 13.1 0.2 0.049 13.1 0.2 1.1 1 0 0 1 1 1 0 Sulfotransferase domain C5-epim_C PF06662.13 ORF106804 - 0.1 12.1 0.1 0.11 12.0 0.1 1.0 1 0 0 1 1 1 0 D-glucuronyl C5-epimerase C-terminus Prim_Zn_Ribbon PF08273.12 ORF106447 - 0.0017 18.6 3.7 0.59 10.5 0.1 2.5 2 0 0 2 2 2 2 Zinc-binding domain of primase-helicase NTF2 PF02136.20 ORF106354 - 0.16 12.5 0.0 0.17 12.5 0.0 1.0 1 0 0 1 1 1 0 Nuclear transport factor 2 (NTF2) domain GNAT_C PF18164.1 ORF106340 - 0.14 11.8 0.0 0.16 11.7 0.0 1.1 1 0 0 1 1 1 0 GNAT-like C-terminal domain Strabismus PF06638.11 ORF10630 - 0.059 12.0 0.4 0.054 12.1 0.4 1.0 1 0 0 1 1 1 0 Strabismus protein DUF669 PF05037.13 ORF106175 - 0.052 13.7 1.0 0.054 13.6 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF669) Actin PF00022.19 ORF105876 - 1.1e-25 90.1 0.0 1.2e-25 90.0 0.0 1.0 1 0 0 1 1 1 1 Actin PsbN PF02468.15 ORF105669 - 0.68 9.8 2.3 1 9.2 2.3 1.3 1 0 0 1 1 1 0 Photosystem II reaction centre N protein (psbN) DUF2628 PF10947.8 ORF105574 - 0.059 13.7 0.8 0.059 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) DUF5546 PF17700.1 ORF104457 - 0.025 14.9 0.0 0.027 14.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5546) IlvB_leader PF08049.11 ORF104179 - 0.12 12.4 2.2 0.28 11.1 2.2 1.6 1 0 0 1 1 1 0 IlvB leader peptide DUF3937 PF13073.6 ORF103969 - 0.0016 18.5 0.2 0.0021 18.1 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3937) Tetraspanin PF00335.20 ORF103969 - 0.075 12.7 0.3 0.075 12.7 0.3 1.1 1 0 0 1 1 1 0 Tetraspanin family COX2-transmemb PF09125.10 ORF103969 - 0.55 10.1 2.9 0.85 9.5 2.6 1.5 1 1 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane PGAP1 PF07819.13 ORF103461 - 0.091 12.5 0.2 0.095 12.4 0.2 1.0 1 0 0 1 1 1 0 PGAP1-like protein Stimulus_sens_1 PF13756.6 ORF103360 - 0.051 14.2 0.0 0.051 14.2 0.0 1.0 1 0 0 1 1 1 0 Stimulus-sensing domain TubC_N PF18563.1 ORF103244 - 0.051 13.6 0.4 0.069 13.1 0.4 1.2 1 0 0 1 1 1 0 TubC N-terminal docking domain Lipoprotein_3 PF00938.17 ORF103244 - 0.053 13.7 0.1 0.059 13.6 0.1 1.2 1 0 0 1 1 1 0 Lipoprotein Toxin_28 PF08115.11 ORF103189 - 0.072 13.0 4.2 0.072 13.0 4.2 2.2 3 0 0 3 3 3 0 SFI toxin family DUF3464 PF11947.8 ORF102754 - 0.089 12.5 0.5 0.1 12.3 0.5 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 UPF0731 PF14982.6 ORF102465 - 0.093 12.9 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 UPF0731 family DUF1240 PF06836.12 ORF101587 - 0.22 12.1 0.1 0.32 11.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1240) Pex24p PF06398.11 ORF10075 - 2.7 6.9 6.4 3 6.7 6.4 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Furin-like_2 PF15913.5 ORF100497 - 0.0099 16.0 6.2 0.01 16.0 6.2 1.1 1 0 0 1 1 1 1 Furin-like repeat, cysteine-rich DUF5433 PF17498.2 ORF100299 - 1.9 8.8 7.5 10 6.4 1.7 2.5 2 1 1 3 3 3 0 Family of unknown function (DUF5433) SapA PF02199.15 NODE_87384_length_184_cov_0.778523_g79443_i0reverse_frame_1 - 1.5 9.2 3.7 18 5.7 0.4 2.1 2 0 0 2 2 2 0 Saposin A-type domain EIN3 PF04873.13 NODE_87384_length_184_cov_0.778523_g79443_i0forward_frame_1 - 0.14 11.4 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 Ethylene insensitive 3 Sh_2 PF17512.2 NODE_87381_length_184_cov_0.805369_g79440_i0forward_frame_1 - 0.28 10.9 2.4 0.31 10.8 2.4 1.0 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein Lamprin PF06403.11 NODE_87367_length_184_cov_0.926174_g79426_i0forward_frame_1 - 0.02 14.9 0.0 0.02 14.9 0.0 1.0 1 0 0 1 1 1 0 Lamprin UPF0728 PF15092.6 NODE_87365_length_184_cov_0.926174_g79424_i0reverse_frame_1 - 0.087 12.7 0.2 0.095 12.5 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 DUF3915 PF13054.6 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_1 - 8.9e-05 22.5 3.8 0.00011 22.2 3.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_1 - 0.047 12.0 3.1 0.042 12.1 3.1 1.0 1 0 0 1 1 1 0 Atrophin-1 family PHY PF00360.20 NODE_87357_length_184_cov_0.966443_g79416_i0forward_frame_1 - 0.073 12.4 0.0 0.073 12.4 0.0 1.1 1 0 0 1 1 1 0 Phytochrome region Pkinase PF00069.25 NODE_87355_length_184_cov_0.993289_g79414_i0reverse_frame_1 - 0.00055 19.4 0.0 0.00057 19.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_87355_length_184_cov_0.993289_g79414_i0reverse_frame_1 - 0.0019 17.5 0.0 0.0021 17.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase CBM_1 PF00734.18 NODE_87352_length_184_cov_1.000000_g79411_i0forward_frame_1 - 0.013 15.4 3.3 0.037 14.0 3.4 1.7 1 1 0 1 1 1 0 Fungal cellulose binding domain DrrA_P4M PF14860.6 NODE_87350_length_184_cov_1.000000_g79409_i0forward_frame_1 - 0.051 13.4 0.0 0.057 13.3 0.0 1.1 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain SHD1 PF03983.12 NODE_87349_length_184_cov_1.006711_g79408_i0forward_frame_1 - 0.086 12.7 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 SLA1 homology domain 1, SHD1 DUF1281_C PF18406.1 NODE_87347_length_184_cov_1.020134_g79406_i0reverse_frame_1 - 0.094 12.4 0.2 0.23 11.2 0.2 1.6 1 1 1 2 2 2 0 Ferredoxin-like domain in Api92-like protein NS3_envE PF02723.14 NODE_87340_length_184_cov_1.053691_g79399_i0reverse_frame_1 - 0.74 9.9 11.6 1.1 9.4 11.6 1.4 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E ASFV_J13L PF05568.11 NODE_87340_length_184_cov_1.053691_g79399_i0reverse_frame_1 - 7.5 6.3 6.5 8 6.2 6.5 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein ErmC PF06308.11 NODE_87339_length_184_cov_1.053691_g79398_i0forward_frame_1 - 0.23 11.8 0.7 5 7.6 0.1 2.2 2 0 0 2 2 2 0 23S rRNA methylastransferase leader peptide (ErmCL) DAZAP2 PF11029.8 NODE_87327_length_184_cov_1.067114_g79386_i0reverse_frame_1 - 0.0025 18.8 0.2 0.0028 18.6 0.2 1.1 1 0 0 1 1 1 1 DAZ associated protein 2 (DAZAP2) P33MONOX PF15302.6 NODE_87327_length_184_cov_1.067114_g79386_i0reverse_frame_1 - 0.077 12.7 0.6 0.07 12.8 0.6 1.0 1 0 0 1 1 1 0 P33 mono-oxygenase DUF3287 PF11690.8 NODE_87327_length_184_cov_1.067114_g79386_i0reverse_frame_1 - 0.16 11.7 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3287) SUKH_6 PF14568.6 NODE_87324_length_184_cov_1.067114_g79383_i0reverse_frame_1 - 0.14 12.6 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall Ion_trans PF00520.31 NODE_87323_length_184_cov_1.067114_g79382_i0forward_frame_1 - 0.00022 20.5 0.2 0.00022 20.5 0.2 1.0 1 0 0 1 1 1 1 Ion transport protein Lamprin PF06403.11 NODE_87321_length_184_cov_1.067114_g79380_i0forward_frame_1 - 1.1 9.2 5.2 1.6 8.7 5.2 1.4 1 1 0 1 1 1 0 Lamprin Ribosomal_L4 PF00573.22 NODE_87320_length_184_cov_1.067114_g79379_i0forward_frame_1 - 0.036 13.8 2.9 0.039 13.7 2.9 1.0 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family HAP2-GCS1 PF10699.9 NODE_87314_length_184_cov_1.067114_g79373_i0forward_frame_1 - 2.3e-13 49.9 0.8 2.8e-13 49.6 0.8 1.1 1 0 0 1 1 1 1 Male gamete fusion factor LCE PF14672.6 NODE_87313_length_184_cov_1.067114_g79372_i0reverse_frame_1 - 0.12 12.9 16.1 0.15 12.7 16.1 1.1 1 0 0 1 1 1 0 Late cornified envelope PRA-CH PF01502.18 NODE_87309_length_184_cov_1.067114_g79368_i0reverse_frame_1 - 0.053 13.4 0.0 0.073 12.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-AMP cyclohydrolase RPN2_C PF18004.1 NODE_87308_length_184_cov_1.067114_g79367_i0reverse_frame_1 - 0.017 15.0 0.8 0.018 15.0 0.8 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain DUF4668 PF15701.5 NODE_87308_length_184_cov_1.067114_g79367_i0reverse_frame_1 - 3.4 7.5 4.0 3.8 7.3 4.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) Beach PF02138.18 NODE_87301_length_184_cov_1.067114_g79360_i0forward_frame_1 - 2.9e-12 46.6 2.5 3.6e-12 46.2 2.5 1.1 1 0 0 1 1 1 1 Beige/BEACH domain DUF273 PF03314.14 NODE_87301_length_184_cov_1.067114_g79360_i0forward_frame_1 - 0.02 14.4 0.2 0.02 14.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF273 Toxin_8 PF07365.12 NODE_87293_length_184_cov_1.067114_g79352_i0reverse_frame_1 - 0.067 13.4 0.9 0.098 12.9 0.9 1.2 1 0 0 1 1 1 0 Alpha conotoxin precursor 2HCT PF03390.15 NODE_87292_length_184_cov_1.073826_g79351_i0forward_frame_1 - 0.099 11.2 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 2-hydroxycarboxylate transporter family GutM PF06923.11 NODE_87285_length_184_cov_1.073826_g79344_i0forward_frame_1 - 0.26 11.4 0.8 0.36 10.9 0.4 1.4 2 0 0 2 2 2 0 Glucitol operon activator protein (GutM) HigB_toxin PF09907.9 NODE_87282_length_184_cov_1.073826_g79341_i0reverse_frame_1 - 0.013 15.7 0.4 0.014 15.6 0.4 1.2 1 0 0 1 1 1 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system Tom37 PF10568.9 NODE_87282_length_184_cov_1.073826_g79341_i0reverse_frame_1 - 0.062 13.6 0.0 0.063 13.6 0.0 1.1 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein ANAPC4_WD40 PF12894.7 NODE_87274_length_184_cov_1.073826_g79333_i0forward_frame_1 - 0.00098 19.4 0.0 0.0011 19.2 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 NODE_87274_length_184_cov_1.073826_g79333_i0forward_frame_1 - 0.0034 18.2 3.2 0.17 12.8 0.1 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat DUF3331 PF11811.8 NODE_87260_length_184_cov_1.073826_g79319_i0forward_frame_1 - 0.056 13.3 0.1 0.064 13.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3331) Macoilin PF09726.9 NODE_87257_length_184_cov_1.073826_g79316_i0reverse_frame_1 - 0.036 12.6 0.3 0.037 12.6 0.3 1.0 1 0 0 1 1 1 0 Macoilin family HABP4_PAI-RBP1 PF04774.15 NODE_87255_length_184_cov_1.073826_g79314_i0reverse_frame_1 - 0.019 15.8 1.7 0.022 15.6 1.7 1.1 1 0 0 1 1 1 0 Hyaluronan / mRNA binding family PDE6_gamma PF04868.12 NODE_87249_length_184_cov_1.073826_g79308_i0forward_frame_1 - 0.34 11.2 2.0 0.38 11.0 2.0 1.1 1 0 0 1 1 1 0 Retinal cGMP phosphodiesterase, gamma subunit Metallothio PF00131.20 NODE_87248_length_184_cov_1.073826_g79307_i0forward_frame_1 - 0.03 14.5 2.6 0.03 14.5 2.6 2.1 1 1 1 2 2 2 0 Metallothionein Opiods_neuropep PF01160.18 NODE_87246_length_184_cov_1.073826_g79305_i0reverse_frame_1 - 0.13 12.3 2.2 2 8.6 0.1 2.1 2 0 0 2 2 2 0 Vertebrate endogenous opioids neuropeptide Arc_C PF18162.1 NODE_87242_length_184_cov_1.073826_g79301_i0reverse_frame_1 - 0.069 13.0 0.0 0.096 12.5 0.0 1.2 1 0 0 1 1 1 0 Arc C-lobe Na_Ca_ex PF01699.24 NODE_87239_length_184_cov_1.073826_g79298_i0forward_frame_1 - 0.0052 16.8 0.3 0.0052 16.8 0.3 1.0 1 0 0 1 1 1 1 Sodium/calcium exchanger protein Tir_receptor_M PF03549.14 NODE_87235_length_184_cov_1.073826_g79294_i0reverse_frame_1 - 0.098 13.0 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) intimin-binding domain Tubulin PF00091.25 NODE_87225_length_184_cov_1.073826_g79284_i0forward_frame_1 - 1.9e-16 60.8 0.2 2e-16 60.8 0.2 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain NAD_binding_10 PF13460.6 NODE_87225_length_184_cov_1.073826_g79284_i0forward_frame_1 - 0.11 12.3 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 NAD(P)H-binding Lamprin PF06403.11 NODE_87222_length_184_cov_1.073826_g79281_i0forward_frame_1 - 0.17 11.9 1.5 0.18 11.8 1.5 1.1 1 0 0 1 1 1 0 Lamprin ChlamPMP_M PF07548.11 NODE_87215_length_184_cov_1.073826_g79274_i0reverse_frame_1 - 0.078 12.9 0.2 0.088 12.7 0.2 1.0 1 0 0 1 1 1 0 Chlamydia polymorphic membrane protein middle domain UL11 PF11094.8 NODE_87211_length_184_cov_1.073826_g79270_i0forward_frame_1 - 1.4 8.9 9.2 0.21 11.5 3.3 2.0 2 0 0 2 2 2 0 Membrane-associated tegument protein DUF4637 PF15470.6 NODE_87205_length_184_cov_1.100671_g79264_i0reverse_frame_1 - 2.4 7.8 8.5 2.8 7.7 8.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) CTV_P13 PF06922.11 NODE_87186_length_184_cov_1.174497_g79245_i0reverse_frame_1 - 0.058 13.5 0.0 0.07 13.2 0.0 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P13 protein Put_DNA-bind_N PF06971.13 NODE_87182_length_184_cov_1.181208_g79241_i0reverse_frame_1 - 0.023 14.7 0.1 0.029 14.4 0.1 1.2 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus Lipase_2 PF01674.18 NODE_87179_length_184_cov_1.194631_g79238_i0forward_frame_1 - 0.0078 15.8 2.4 0.008 15.7 2.4 1.0 1 0 0 1 1 1 1 Lipase (class 2) Phage_gp49_66 PF13876.6 NODE_87177_length_184_cov_1.201342_g79236_i0forward_frame_1 - 0.14 12.4 0.6 0.18 12.1 0.6 1.2 1 0 0 1 1 1 0 Phage protein (N4 Gp49/phage Sf6 gene 66) family DUF5371 PF17341.2 NODE_87174_length_184_cov_1.214765_g79233_i0forward_frame_1 - 0.034 14.3 0.2 0.041 14.1 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5371) F_actin_cap_B PF01115.17 NODE_87174_length_184_cov_1.214765_g79233_i0forward_frame_1 - 0.15 11.7 0.1 0.18 11.4 0.1 1.1 1 0 0 1 1 1 0 F-actin capping protein, beta subunit MatE PF01554.18 NODE_87172_length_184_cov_1.214765_g79231_i0reverse_frame_1 - 6e-07 29.2 0.1 6.2e-07 29.2 0.1 1.0 1 0 0 1 1 1 1 MatE DUF4769 PF15992.5 NODE_87172_length_184_cov_1.214765_g79231_i0reverse_frame_1 - 0.13 12.1 0.4 0.14 11.9 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) UMPH-1 PF05822.12 NODE_87171_length_184_cov_1.221477_g79230_i0forward_frame_1 - 0.25 10.8 0.1 0.28 10.7 0.1 1.0 1 0 0 1 1 1 0 Pyrimidine 5'-nucleotidase (UMPH-1) Gal_Lectin PF02140.18 NODE_87167_length_184_cov_1.255034_g79226_i0reverse_frame_1 - 0.044 14.2 0.3 0.053 14.0 0.3 1.1 1 0 0 1 1 1 0 Galactose binding lectin domain Tna_leader PF08053.11 NODE_87164_length_184_cov_1.261745_g79223_i0reverse_frame_1 - 0.68 10.0 9.9 0.56 10.3 0.8 2.9 1 1 1 2 2 2 0 Tryptophanase operon leader peptide DUF2724 PF10893.8 NODE_87157_length_184_cov_1.275168_g79216_i0forward_frame_1 - 0.071 13.0 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2724) N-glycanase_C PF09113.10 NODE_87154_length_184_cov_1.281879_g79213_i0forward_frame_1 - 0.043 13.6 0.3 0.043 13.6 0.3 1.1 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal APC_15aa PF05972.11 NODE_87139_length_184_cov_1.335570_g79198_i0reverse_frame_1 - 3.2 8.2 4.3 1.8 9.0 2.0 1.7 2 0 0 2 2 2 0 APC 15 residue motif zf-NF-X1 PF01422.17 NODE_87138_length_184_cov_1.335570_g79197_i0reverse_frame_1 - 0.19 11.8 5.5 0.41 10.8 5.5 1.5 1 0 0 1 1 1 0 NF-X1 type zinc finger HSL_N PF06350.12 NODE_87136_length_184_cov_1.335570_g79195_i0forward_frame_1 - 0.12 11.3 1.1 0.13 11.2 1.1 1.0 1 0 0 1 1 1 0 Hormone-sensitive lipase (HSL) N-terminus YABBY PF04690.13 NODE_87128_length_184_cov_1.342282_g79187_i0forward_frame_1 - 0.071 13.7 0.2 0.071 13.7 0.2 1.1 1 0 0 1 1 1 0 YABBY protein Nepo_coat_N PF03689.15 NODE_87121_length_184_cov_1.362416_g79180_i0reverse_frame_1 - 0.041 13.8 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain zf-ISL3 PF14690.6 NODE_87119_length_184_cov_1.362416_g79178_i0forward_frame_1 - 0.0048 17.5 0.8 0.0093 16.6 0.4 1.6 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF5304 PF17230.2 NODE_87109_length_184_cov_1.422819_g79168_i0reverse_frame_1 - 0.028 14.6 0.0 0.032 14.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5304) zf-C5HC2 PF02928.16 NODE_87109_length_184_cov_1.422819_g79168_i0forward_frame_1 - 0.013 15.9 2.1 0.017 15.5 2.1 1.1 1 0 0 1 1 1 0 C5HC2 zinc finger Ran_BP1 PF00638.18 NODE_87107_length_184_cov_1.429530_g79166_i0reverse_frame_1 - 0.012 15.8 0.5 0.013 15.8 0.5 1.0 1 0 0 1 1 1 0 RanBP1 domain Adeno_PX PF05829.12 NODE_87103_length_184_cov_1.469799_g79162_i0forward_frame_1 - 0.38 10.7 0.2 0.38 10.7 0.2 1.5 2 0 0 2 2 2 0 Adenovirus late L2 mu core protein (Protein X) DUF3072 PF11272.8 NODE_87097_length_184_cov_1.503356_g79156_i0forward_frame_1 - 0.13 12.2 0.4 1.8 8.6 0.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3072) Herpes_U30 PF04523.13 NODE_87096_length_184_cov_1.503356_g79155_i0reverse_frame_1 - 0.14 10.0 0.3 0.16 9.8 0.3 1.0 1 0 0 1 1 1 0 Herpes virus tegument protein U30 RVT_1 PF00078.27 NODE_87087_length_184_cov_1.557047_g79146_i0reverse_frame_1 - 6.6e-08 32.3 0.0 7e-08 32.3 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Rpr2 PF04032.16 NODE_87081_length_184_cov_1.563758_g79140_i0reverse_frame_1 - 0.073 13.4 0.0 0.081 13.2 0.0 1.1 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF2644 PF10841.8 NODE_87079_length_184_cov_1.563758_g79138_i0forward_frame_1 - 0.12 12.6 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) ODV-E18 PF10717.9 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 0.054 13.4 2.2 0.065 13.1 2.2 1.2 1 1 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 ASFV_J13L PF05568.11 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 0.1 12.3 0.2 0.11 12.2 0.2 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein DUF929 PF06053.11 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 0.11 11.8 0.2 0.11 11.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF929) DUF5385 PF17359.2 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 0.53 9.8 1.2 0.58 9.7 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) FeoB_associated PF12669.7 NODE_87078_length_184_cov_1.570470_g79137_i0reverse_frame_1 - 9.4 6.7 13.4 23 5.5 13.4 1.7 1 1 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Glyco_hydro_38N PF01074.22 NODE_87077_length_184_cov_1.570470_g79136_i0forward_frame_1 - 1e-14 54.6 0.0 1.1e-14 54.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain VASt PF16016.5 NODE_87074_length_184_cov_1.583893_g79133_i0forward_frame_1 - 0.096 13.1 0.0 0.1 13.0 0.0 1.0 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain 2OG-FeII_Oxy_4 PF13661.6 NODE_87069_length_184_cov_1.597315_g79128_i0forward_frame_1 - 0.17 12.6 0.0 0.17 12.6 0.0 1.1 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Aa_trans PF01490.18 NODE_87067_length_184_cov_1.597315_g79126_i0reverse_frame_1 - 4.1e-06 25.8 4.1 4.3e-06 25.7 4.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein EI24 PF07264.11 NODE_87067_length_184_cov_1.597315_g79126_i0reverse_frame_1 - 0.033 14.4 2.8 0.034 14.4 2.8 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) VPDSG-CTERM PF18205.1 NODE_87065_length_184_cov_1.604027_g79124_i0forward_frame_1 - 0.23 11.3 1.5 0.31 10.9 1.5 1.2 1 0 0 1 1 1 0 VPDSG-CTERM motif QSregVF_b PF12843.7 NODE_87059_length_184_cov_1.610738_g79118_i0forward_frame_1 - 0.012 15.5 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 Putative quorum-sensing-regulated virulence factor HTH_11 PF08279.12 NODE_87054_length_184_cov_1.610738_g79113_i0forward_frame_1 - 0.27 11.2 0.4 16 5.5 0.0 2.1 2 0 0 2 2 2 0 HTH domain AMA-1 PF02430.15 NODE_87033_length_184_cov_1.711409_g79092_i0reverse_frame_1 - 0.022 13.7 0.7 0.042 12.8 0.4 1.6 1 1 1 2 2 2 0 Apical membrane antigen 1 Lipoprotein_X PF03305.13 NODE_87033_length_184_cov_1.711409_g79092_i0reverse_frame_1 - 0.13 12.0 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Mycoplasma MG185/MG260 protein ChapFlgA_N PF17656.1 NODE_87020_length_184_cov_1.778523_g79079_i0forward_frame_1 - 0.043 14.0 0.1 0.046 13.9 0.1 1.1 1 0 0 1 1 1 0 FlgA N-terminal domain DUF2691 PF10903.8 NODE_87016_length_184_cov_1.818792_g79075_i0reverse_frame_1 - 0.13 12.1 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2691) UPF0506 PF11703.8 NODE_87015_length_184_cov_1.825503_g79074_i0forward_frame_1 - 0.34 11.3 4.8 0.5 10.8 4.8 1.4 1 1 0 1 1 1 0 UPF0506 DUF4552 PF15089.6 NODE_87012_length_184_cov_1.845638_g79071_i0forward_frame_1 - 0.076 12.1 0.1 0.084 11.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4552) Kinesin PF00225.23 NODE_87003_length_184_cov_1.879195_g79062_i0reverse_frame_1 - 5.6e-22 78.1 0.1 5.8e-22 78.0 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain PHM7_cyt PF14703.6 NODE_87002_length_184_cov_1.899329_g79061_i0forward_frame_1 - 0.1 12.8 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Ole-e-6 PF09253.10 NODE_87000_length_184_cov_1.939597_g79059_i0reverse_frame_1 - 0.031 14.2 0.7 0.05 13.6 0.7 1.3 1 0 0 1 1 1 0 Pollen allergen ole e 6 CLIP_SPH_mas PF18398.1 NODE_86979_length_184_cov_2.134228_g79038_i0forward_frame_1 - 0.12 12.7 0.8 0.59 10.6 0.2 2.1 1 1 1 2 2 2 0 Clip-domain serine protease homolog masquerade Herpes_HEPA PF03324.14 NODE_86978_length_184_cov_2.140940_g79037_i0reverse_frame_1 - 0.17 12.4 0.2 0.18 12.3 0.2 1.2 1 0 0 1 1 1 0 Herpesvirus DNA helicase/primase complex associated protein IML1 PF12257.8 NODE_86970_length_184_cov_2.167785_g79029_i0forward_frame_1 - 0.076 12.1 0.0 0.083 12.0 0.0 1.0 1 0 0 1 1 1 0 Vacuolar membrane-associated protein Iml1 RecR PF02132.15 NODE_86968_length_184_cov_2.174497_g79027_i0forward_frame_1 - 0.12 11.9 0.9 0.2 11.3 0.9 1.3 1 0 0 1 1 1 0 RecR protein DUF1488 PF07369.11 NODE_86967_length_184_cov_2.174497_g79026_i0forward_frame_1 - 0.00049 20.0 0.0 0.00056 19.8 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1488) TNFR_c6 PF00020.18 NODE_86965_length_184_cov_2.194631_g79024_i0forward_frame_1 - 0.038 14.4 8.0 0.41 11.1 1.9 2.3 2 1 0 2 2 2 0 TNFR/NGFR cysteine-rich region Peptidase_M16_C PF05193.21 NODE_86964_length_184_cov_2.214765_g79023_i0forward_frame_1 - 0.12 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase M16 inactive domain RRN9 PF10680.9 NODE_86961_length_184_cov_2.255034_g79020_i0forward_frame_1 - 0.014 15.7 0.8 0.015 15.5 0.8 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor NAM-associated PF14303.6 NODE_86958_length_184_cov_2.308725_g79017_i0reverse_frame_1 - 3.4 8.4 10.3 4.1 8.1 10.3 1.0 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain Trypan_PARP PF05887.11 NODE_86957_length_184_cov_2.335570_g79016_i0forward_frame_1 - 3.9 7.5 10.1 4.9 7.1 10.1 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) FAP PF07174.11 NODE_86957_length_184_cov_2.335570_g79016_i0forward_frame_1 - 6.2 6.2 9.8 6.8 6.1 9.8 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) SNAD4 PF18750.1 NODE_86954_length_184_cov_2.389262_g79013_i0reverse_frame_1 - 0.018 15.2 0.6 0.018 15.2 0.6 1.1 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 NAD1 PF18778.1 NODE_86954_length_184_cov_2.389262_g79013_i0reverse_frame_1 - 0.081 13.0 0.3 0.083 13.0 0.3 1.1 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 APOBEC1 PF18769.1 NODE_86954_length_184_cov_2.389262_g79013_i0reverse_frame_1 - 0.096 12.9 0.4 0.1 12.9 0.4 1.2 1 0 0 1 1 1 0 APOBEC1 DHC_N2 PF08393.13 NODE_86940_length_184_cov_2.503356_g78999_i0reverse_frame_1 - 8.7e-06 25.1 0.0 1e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 DUF5039 PF16442.5 NODE_86937_length_184_cov_2.624161_g78996_i0forward_frame_1 - 0.074 12.6 0.0 0.088 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5039) Rad33 PF08730.10 NODE_86924_length_184_cov_2.859060_g78983_i0forward_frame_1 - 0.013 15.5 1.0 0.014 15.4 1.0 1.1 1 0 0 1 1 1 0 Rad33 Lamprin PF06403.11 NODE_86919_length_184_cov_3.060403_g78978_i0forward_frame_1 - 0.22 11.5 4.0 0.3 11.0 4.0 1.3 1 0 0 1 1 1 0 Lamprin DUF5320 PF17253.2 NODE_86919_length_184_cov_3.060403_g78978_i0forward_frame_1 - 4.1 8.5 8.5 5 8.3 8.5 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5320) Siva PF05458.12 NODE_86918_length_184_cov_3.100671_g78977_i0forward_frame_1 - 0.058 13.1 5.4 0.055 13.1 5.4 1.1 1 0 0 1 1 1 0 Cd27 binding protein (Siva) zf-His_Me_endon PF05551.11 NODE_86915_length_184_cov_3.140940_g78974_i0reverse_frame_1 - 0.0025 18.0 0.4 0.0029 17.8 0.4 1.0 1 0 0 1 1 1 1 Zinc-binding loop region of homing endonuclease Lamprin PF06403.11 NODE_86914_length_184_cov_3.214765_g78973_i0reverse_frame_1 - 0.0098 15.9 3.6 0.01 15.8 3.6 1.0 1 0 0 1 1 1 1 Lamprin Rad9_Rad53_bind PF08605.10 NODE_86910_length_184_cov_4.013423_g78969_i0reverse_frame_1 - 0.11 12.6 0.0 0.14 12.4 0.0 1.2 1 1 0 1 1 1 0 Fungal Rad9-like Rad53-binding # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks438.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks438.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks438.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks438.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:44:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ProQ PF04352.13 NODE_86903_length_184_cov_7.516779_g78962_i0reverse_frame_1 - 0.005 16.7 0.0 0.0051 16.7 0.0 1.2 1 0 0 1 1 1 1 ProQ/FINO family Humanin PF15040.6 NODE_86903_length_184_cov_7.516779_g78962_i0forward_frame_1 - 0.65 9.5 4.3 0.67 9.5 0.5 2.2 2 0 0 2 2 2 0 Humanin family MMM1 PF10296.9 NODE_86902_length_184_cov_8.718121_g78961_i0forward_frame_1 - 0.02 13.9 0.2 0.022 13.9 0.2 1.0 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 ETRAMP PF09716.10 NODE_86902_length_184_cov_8.718121_g78961_i0forward_frame_1 - 1.1 9.3 13.9 1.4 9.1 13.9 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Amnionless PF14828.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.013 14.3 4.3 0.015 14.2 4.3 1.0 1 0 0 1 1 1 0 Amnionless DUF4349 PF14257.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.02 14.4 1.0 0.023 14.1 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) TMEM154 PF15102.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.02 14.8 3.4 0.025 14.5 3.4 1.2 1 0 0 1 1 1 0 TMEM154 protein family DUF4577 PF15145.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.029 14.4 3.4 0.032 14.3 3.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Shisa PF13908.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.094 12.9 6.5 0.13 12.5 6.5 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF3040 PF11239.8 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.25 11.6 7.1 0.29 11.4 7.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) Mid2 PF04478.12 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 0.56 10.0 4.6 0.68 9.8 4.6 1.1 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor Orf78 PF06024.12 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 1.4 9.3 8.5 3.6 7.9 8.5 1.7 1 1 0 1 1 1 0 Orf78 (ac78) DUF3357 PF11837.8 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_1 - 6.3 7.3 8.6 11 6.6 8.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3357) DUF4131 PF13567.6 NODE_86900_length_184_cov_12.006711_g78959_i0forward_frame_1 - 7.4 6.2 11.7 7.5 6.2 11.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) HEPN_Cthe2314 PF18730.1 NODE_86898_length_184_cov_13.852349_g78957_i0forward_frame_1 - 4.7 7.2 5.9 5.1 7.1 5.9 1.0 1 0 0 1 1 1 0 Cthe_2314-like HEPN B277 PF17623.2 NODE_86894_length_184_cov_16.885906_g78953_i0reverse_frame_1 - 0.048 12.7 1.4 0.048 12.7 1.4 1.1 1 0 0 1 1 1 0 Domain of unknown function MMPL PF03176.15 NODE_86887_length_184_cov_20.751678_g78946_i0forward_frame_1 - 0.047 12.6 0.0 0.048 12.6 0.0 1.0 1 0 0 1 1 1 0 MMPL family TarH PF02203.15 NODE_86887_length_184_cov_20.751678_g78946_i0forward_frame_1 - 1.5 8.7 4.3 1.7 8.5 4.3 1.1 1 0 0 1 1 1 0 Tar ligand binding domain homologue Bunya_G1 PF03557.15 NODE_86873_length_184_cov_30.832215_g78932_i0reverse_frame_1 - 0.083 10.9 0.2 0.081 10.9 0.2 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G1 zf-RING_2 PF13639.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 1.2e-07 31.9 1.7 1.7e-07 31.5 1.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 1.3e-07 31.8 1.5 1.8e-07 31.4 1.5 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 5.9e-06 26.3 0.2 6.7e-06 26.1 0.2 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 6.1e-06 25.8 0.5 8.4e-06 25.3 0.5 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 1.1e-05 25.1 1.0 1.1e-05 25.1 1.0 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.00015 21.5 5.0 0.00045 20.0 5.0 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.00018 21.5 1.1 0.00022 21.2 0.5 1.5 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.00069 19.3 0.2 0.0013 18.4 0.2 1.5 1 0 0 1 1 1 1 RING-like zinc finger PHD PF00628.29 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0021 17.9 1.8 0.0031 17.4 1.8 1.3 1 0 0 1 1 1 1 PHD-finger FANCL_C PF11793.8 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0037 17.4 3.1 0.01 16.0 3.1 1.7 1 1 0 1 1 1 1 FANCL C-terminal domain zf-C3H2C3 PF17122.5 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0042 17.1 3.0 0.049 13.7 0.2 2.1 2 0 0 2 2 2 1 Zinc-finger RINGv PF12906.7 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0043 17.2 1.2 0.0066 16.6 1.2 1.3 1 0 0 1 1 1 1 RING-variant domain zf-TFIIB PF13453.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0051 16.1 2.4 0.54 9.6 0.1 2.6 3 0 0 3 3 3 2 Transcription factor zinc-finger zf-C3HC4_3 PF13920.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0053 16.6 0.7 0.0075 16.1 0.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.0062 16.5 2.1 0.012 15.6 2.1 1.5 1 1 0 1 1 1 1 zinc-RING finger domain YdjO PF14169.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.01 15.6 0.9 0.014 15.1 0.9 1.3 1 0 0 1 1 1 1 Cold-inducible protein YdjO zf-RING_4 PF14570.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.023 14.5 1.2 0.034 14.0 1.2 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain OrfB_Zn_ribbon PF07282.11 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.033 14.1 0.7 5.9 6.9 0.1 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-trcl PF13451.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.058 13.3 1.0 0.058 13.3 1.0 1.8 2 1 0 2 2 1 0 Probable zinc-ribbon domain zf-RING-like PF08746.11 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.058 13.7 4.7 0.12 12.7 4.7 1.5 1 1 0 1 1 1 0 RING-like domain Prok-RING_4 PF14447.6 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.077 12.9 2.3 0.13 12.1 2.3 1.4 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-Nse PF11789.8 NODE_86867_length_184_cov_32.872483_g78926_i0forward_frame_1 - 0.094 12.5 0.4 0.094 12.5 0.4 1.5 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit PDGF PF00341.17 NODE_86865_length_184_cov_33.429530_g78924_i0forward_frame_1 - 0.019 15.2 1.4 0.023 15.0 1.4 1.2 1 0 0 1 1 1 0 PDGF/VEGF domain FRQ PF09421.10 NODE_86860_length_184_cov_35.543624_g78919_i0forward_frame_1 - 0.039 12.0 1.4 0.044 11.8 1.4 1.0 1 0 0 1 1 1 0 Frequency clock protein OrfA PF17495.2 NODE_86860_length_184_cov_35.543624_g78919_i0forward_frame_1 - 0.066 13.4 0.8 0.14 12.3 0.8 1.5 1 1 0 1 1 1 0 Vpr-like OrfA zf-rbx1 PF12678.7 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 3.6e-06 27.2 0.0 5e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.00022 21.5 0.0 0.0003 21.1 0.0 1.2 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.0073 16.3 0.0 0.0093 16.0 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.026 14.1 0.0 0.032 13.9 0.0 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.065 13.1 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.12 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 NODE_86856_length_184_cov_38.107383_g78915_i0reverse_frame_1 - 0.12 12.1 1.2 0.25 11.1 1.2 1.5 1 0 0 1 1 1 0 RING-like zinc finger Pex24p PF06398.11 NODE_86845_length_184_cov_46.724832_g78904_i0reverse_frame_1 - 0.31 10.0 3.1 0.33 9.9 3.1 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Cytochrom_NNT PF03264.14 NODE_86837_length_184_cov_60.516779_g78896_i0forward_frame_1 - 0.032 13.9 0.2 0.035 13.8 0.2 1.0 1 0 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region TRAM1 PF08390.11 NODE_86834_length_184_cov_65.604027_g78893_i0reverse_frame_1 - 0.065 12.9 2.0 0.09 12.4 2.0 1.2 1 0 0 1 1 1 0 TRAM1-like protein DnaJ PF00226.31 NODE_86834_length_184_cov_65.604027_g78893_i0forward_frame_1 - 9.3e-05 22.5 1.2 0.00011 22.3 0.8 1.3 1 1 0 1 1 1 1 DnaJ domain Peptidase_C7 PF01830.18 NODE_86833_length_184_cov_66.268456_g78892_i0forward_frame_1 - 0.084 12.3 1.6 0.096 12.1 1.6 1.0 1 0 0 1 1 1 0 Peptidase C7 family Myticin-prepro PF10690.9 NODE_86832_length_184_cov_73.879195_g78891_i0reverse_frame_1 - 0.38 11.0 4.0 0.42 10.9 4.0 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel SyrA PF11089.8 NODE_86830_length_184_cov_80.328859_g78889_i0reverse_frame_1 - 0.21 11.7 0.0 0.36 10.9 0.0 1.4 1 0 0 1 1 1 0 Exopolysaccharide production repressor Enterotoxin_HS1 PF08090.11 NODE_86828_length_184_cov_97.442953_g78887_i0forward_frame_1 - 0.028 14.4 2.3 0.028 14.4 2.3 1.8 2 0 0 2 2 2 0 Heat stable E.coli enterotoxin 1 UPF0259 PF06790.11 NODE_86821_length_184_cov_121.758389_g78880_i0reverse_frame_1 - 0.044 13.5 0.1 0.044 13.5 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0259) AAA_8 PF12780.7 NODE_86815_length_184_cov_202.134228_g78874_i0reverse_frame_1 - 5.2e-18 65.3 0.1 5.6e-18 65.2 0.1 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 TNFR_16_TM PF18422.1 NODE_86809_length_184_cov_1303.369128_g78868_i0reverse_frame_1 - 0.27 11.2 0.2 0.27 11.2 0.2 2.0 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain O-antigen_lig PF13425.6 NODE_86809_length_184_cov_1303.369128_g78868_i0forward_frame_1 - 0.034 13.0 1.2 0.039 12.8 1.2 1.0 1 0 0 1 1 1 0 O-antigen ligase like membrane protein EBV-NA1 PF02905.14 NODE_86801_length_185_cov_0.833333_g78860_i0reverse_frame_1 - 0.16 11.8 0.1 0.17 11.7 0.1 1.0 1 0 0 1 1 1 0 Epstein Barr virus nuclear antigen-1, DNA-binding domain MFS_1 PF07690.16 NODE_86801_length_185_cov_0.833333_g78860_i0forward_frame_1 - 2.6e-08 33.2 0.6 2.7e-08 33.1 0.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sec23_trunk PF04811.15 NODE_86799_length_185_cov_0.846667_g78858_i0reverse_frame_1 - 6.1e-14 52.2 0.1 6.1e-14 52.2 0.1 1.0 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain SR-25 PF10500.9 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_1 - 2.2 7.9 16.3 2.5 7.7 16.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein TBCA PF02970.16 NODE_86787_length_185_cov_0.926667_g78846_i0forward_frame_1 - 0.027 14.8 2.5 0.031 14.6 2.5 1.2 1 0 0 1 1 1 0 Tubulin binding cofactor A Epiglycanin_C PF14654.6 NODE_86786_length_185_cov_0.926667_g78845_i0forward_frame_1 - 4.6 7.4 7.2 7.1 6.8 1.7 2.0 1 1 1 2 2 2 0 Mucin, catalytic, TM and cytoplasmic tail region Lamprin PF06403.11 NODE_86785_length_185_cov_0.933333_g78844_i0forward_frame_1 - 9.3 6.2 14.4 4e+02 0.9 14.4 2.0 1 1 0 1 1 1 0 Lamprin PH_15 PF17339.2 NODE_86780_length_185_cov_0.973333_g78839_i0forward_frame_1 - 0.12 12.3 0.1 0.16 11.9 0.1 1.1 1 0 0 1 1 1 0 PH domain DUF832 PF05734.11 NODE_86779_length_185_cov_0.980000_g78838_i0forward_frame_1 - 0.72 9.3 2.2 0.77 9.2 2.2 1.1 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) DUF2809 PF10990.8 NODE_86745_length_185_cov_1.060000_g78804_i0forward_frame_1 - 0.055 14.1 0.3 0.11 13.1 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2809) DUF4476 PF14771.6 NODE_86739_length_185_cov_1.060000_g78798_i0forward_frame_1 - 0.03 14.6 0.1 0.037 14.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4476) Ccdc124 PF06244.12 NODE_86731_length_185_cov_1.066667_g78790_i0forward_frame_1 - 0.13 12.9 0.2 0.16 12.5 0.2 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 124 /Oxs1 LST1 PF05083.13 NODE_86720_length_185_cov_1.066667_g78779_i0forward_frame_1 - 0.085 13.1 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 LST-1 protein DUF1010 PF06231.11 NODE_86719_length_185_cov_1.066667_g78778_i0reverse_frame_1 - 0.21 12.1 2.8 0.28 11.7 2.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) Spot_14 PF07084.12 NODE_86718_length_185_cov_1.066667_g78777_i0forward_frame_1 - 0.13 12.4 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Thyroid hormone-inducible hepatic protein Spot 14 HEAT PF02985.22 NODE_86713_length_185_cov_1.066667_g78772_i0forward_frame_1 - 0.0018 18.3 0.0 0.0034 17.5 0.0 1.4 1 0 0 1 1 1 1 HEAT repeat HEAT_EZ PF13513.6 NODE_86713_length_185_cov_1.066667_g78772_i0forward_frame_1 - 0.0038 17.7 0.0 0.52 10.9 0.0 1.7 1 1 1 2 2 2 2 HEAT-like repeat HEAT_2 PF13646.6 NODE_86713_length_185_cov_1.066667_g78772_i0forward_frame_1 - 0.049 14.0 0.0 0.056 13.8 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats Mo25 PF08569.11 NODE_86713_length_185_cov_1.066667_g78772_i0forward_frame_1 - 0.067 12.5 0.0 0.075 12.4 0.0 1.0 1 0 0 1 1 1 0 Mo25-like DUF1856 PF08983.10 NODE_86708_length_185_cov_1.066667_g78767_i0reverse_frame_1 - 0.045 14.0 0.2 0.085 13.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1856) Bd3614-deam PF14439.6 NODE_86699_length_185_cov_1.066667_g78758_i0reverse_frame_1 - 0.0047 17.0 0.0 0.0053 16.8 0.0 1.0 1 0 0 1 1 1 1 Bd3614-like deaminase DHODB_Fe-S_bind PF10418.9 NODE_86699_length_185_cov_1.066667_g78758_i0reverse_frame_1 - 0.013 15.3 0.7 0.017 14.9 0.7 1.3 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Flu_B_M2 PF04772.12 NODE_86687_length_185_cov_1.066667_g78746_i0forward_frame_1 - 0.14 12.4 0.1 0.15 12.3 0.1 1.2 1 0 0 1 1 1 0 Influenza B matrix protein 2 (BM2) Amnionless PF14828.6 NODE_86684_length_185_cov_1.066667_g78743_i0reverse_frame_1 - 0.2 10.4 2.0 0.22 10.3 2.0 1.0 1 0 0 1 1 1 0 Amnionless Neisseria_PilC PF05567.11 NODE_86681_length_185_cov_1.066667_g78740_i0forward_frame_1 - 0.094 11.7 0.0 0.098 11.6 0.0 1.1 1 0 0 1 1 1 0 Neisseria PilC beta-propeller domain KleE PF17394.2 NODE_86674_length_185_cov_1.066667_g78733_i0reverse_frame_1 - 0.09 13.0 0.0 0.099 12.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein SNAP PF14938.6 NODE_86673_length_185_cov_1.066667_g78732_i0reverse_frame_1 - 0.041 13.3 0.1 0.045 13.2 0.1 1.0 1 0 0 1 1 1 0 Soluble NSF attachment protein, SNAP HTH_33 PF13592.6 NODE_86669_length_185_cov_1.086667_g78728_i0reverse_frame_1 - 0.075 12.7 0.1 0.11 12.1 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn helix D5_N PF08706.11 NODE_86664_length_185_cov_1.126667_g78723_i0reverse_frame_1 - 0.083 13.2 0.0 0.087 13.1 0.0 1.0 1 0 0 1 1 1 0 D5 N terminal like INTAP PF16617.5 NODE_86661_length_185_cov_1.133333_g78720_i0reverse_frame_1 - 0.04 14.3 0.2 0.046 14.1 0.2 1.1 1 0 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region E1-E2_ATPase PF00122.20 NODE_86658_length_185_cov_1.146667_g78717_i0reverse_frame_1 - 0.1 12.1 0.5 0.1 12.1 0.5 1.0 1 0 0 1 1 1 0 E1-E2 ATPase Ldh_1_N PF00056.23 NODE_86658_length_185_cov_1.146667_g78717_i0forward_frame_1 - 7.3e-12 45.6 0.1 7.9e-12 45.5 0.1 1.0 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Thioredoxin_4 PF13462.6 NODE_86652_length_185_cov_1.153333_g78711_i0reverse_frame_1 - 0.17 12.0 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin PriCT_1 PF08708.11 NODE_86651_length_185_cov_1.160000_g78710_i0reverse_frame_1 - 0.1 12.4 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Primase C terminal 1 (PriCT-1) FAD_oxidored PF12831.7 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 8.6e-08 31.9 0.2 1e-07 31.7 0.2 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 4.5e-07 29.4 0.2 5.1e-07 29.2 0.2 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 2.9e-06 26.6 0.2 3.1e-06 26.5 0.2 1.0 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 5.6e-05 22.4 0.1 6.4e-05 22.2 0.1 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 5.7e-05 22.0 0.1 6.4e-05 21.8 0.1 1.0 1 0 0 1 1 1 1 HI0933-like protein NAD_binding_8 PF13450.6 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.00021 21.4 0.2 0.00026 21.1 0.2 1.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.00025 20.4 0.1 0.0003 20.1 0.1 1.0 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.0012 18.1 0.1 0.0012 18.1 0.1 1.0 1 0 0 1 1 1 1 Thi4 family AlaDh_PNT_C PF01262.21 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.011 15.0 0.0 0.012 15.0 0.0 1.0 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.025 14.2 0.2 0.027 14.0 0.2 1.0 1 0 0 1 1 1 0 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.068 12.2 0.1 0.079 12.0 0.1 1.0 1 0 0 1 1 1 0 Lycopene cyclase protein Pyr_redox_3 PF13738.6 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.073 12.3 0.1 0.083 12.1 0.1 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase UPF0227 PF05728.12 NODE_86649_length_185_cov_1.160000_g78708_i0forward_frame_1 - 0.11 12.4 0.0 0.12 12.3 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) DUF717 PF05338.12 NODE_86641_length_185_cov_1.180000_g78700_i0reverse_frame_1 - 0.016 15.3 0.6 0.022 14.8 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF717) L_protein_N PF15518.6 NODE_86639_length_185_cov_1.193333_g78698_i0reverse_frame_1 - 0.035 13.9 0.1 0.053 13.4 0.1 1.3 1 0 0 1 1 1 0 L protein N-terminus Tubulin_3 PF14881.6 NODE_86638_length_185_cov_1.200000_g78697_i0reverse_frame_1 - 0.18 11.5 0.0 0.19 11.4 0.0 1.0 1 0 0 1 1 1 0 Tubulin domain Metallothi_Euk2 PF12809.7 NODE_86637_length_185_cov_1.200000_g78696_i0forward_frame_1 - 0.096 13.0 21.3 1.1 9.6 3.2 3.0 1 1 2 3 3 3 0 Eukaryotic metallothionein Pico_P2A PF00947.19 NODE_86637_length_185_cov_1.200000_g78696_i0forward_frame_1 - 2.4 8.2 20.4 5.2 7.1 1.8 3.1 1 1 2 3 3 3 0 Picornavirus core protein 2A zf-C2H2_11 PF16622.5 NODE_86637_length_185_cov_1.200000_g78696_i0forward_frame_1 - 2.5 7.9 13.0 11 5.9 0.6 3.3 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-ISL3 PF14690.6 NODE_86637_length_185_cov_1.200000_g78696_i0forward_frame_1 - 5.6 7.7 19.9 6 7.6 6.8 2.9 1 1 2 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Fibrillin_U_N PF18193.1 NODE_86636_length_185_cov_1.200000_g78695_i0forward_frame_1 - 0.53 10.4 2.6 6.9 6.9 0.4 2.9 2 1 1 3 3 3 0 Fibrillin 1 unique N-terminal domain zf-AN1 PF01428.16 NODE_86630_length_185_cov_1.220000_g78689_i0forward_frame_1 - 3.8 7.8 14.5 0.52 10.5 3.5 2.8 1 1 2 3 3 3 0 AN1-like Zinc finger FhuF_C PF11575.8 NODE_86625_length_185_cov_1.240000_g78684_i0forward_frame_1 - 7 6.7 10.4 8.9 6.4 2.5 2.4 3 0 0 3 3 3 0 FhuF 2Fe-2S C-terminal domain Ribosomal_L38e PF01781.18 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_1 - 0.028 14.5 0.1 0.032 14.3 0.1 1.1 1 0 0 1 1 1 0 Ribosomal L38e protein family BPL_LplA_LipB PF03099.19 NODE_86607_length_185_cov_1.273333_g78666_i0reverse_frame_1 - 0.001 19.0 0.0 0.0011 18.9 0.0 1.1 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family C8 PF08742.11 NODE_86601_length_185_cov_1.306667_g78660_i0reverse_frame_1 - 0.0038 17.6 0.3 0.0047 17.3 0.3 1.1 1 0 0 1 1 1 1 C8 domain DUF515 PF04415.12 NODE_86599_length_185_cov_1.320000_g78658_i0reverse_frame_1 - 0.8 8.0 2.5 0.84 8.0 2.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF515) SK_channel PF03530.14 NODE_86598_length_185_cov_1.326667_g78657_i0forward_frame_1 - 0.0062 16.5 0.1 0.0069 16.4 0.1 1.0 1 0 0 1 1 1 1 Calcium-activated SK potassium channel RE_AspBHI_N PF18062.1 NODE_86598_length_185_cov_1.326667_g78657_i0forward_frame_1 - 0.08 12.5 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease AspBHI N-terminal ADAM_CR_2 PF17771.1 NODE_86597_length_185_cov_1.326667_g78656_i0forward_frame_1 - 0.031 14.8 1.0 0.039 14.5 1.0 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich domain vATP-synt_AC39 PF01992.16 NODE_86594_length_185_cov_1.326667_g78653_i0forward_frame_1 - 0.053 13.0 0.1 0.064 12.7 0.1 1.0 1 0 0 1 1 1 0 ATP synthase (C/AC39) subunit APC_u13 PF16634.5 NODE_86592_length_185_cov_1.326667_g78651_i0reverse_frame_1 - 0.14 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on APC between APC_crr and SAMP Toxin_38 PF14866.6 NODE_86585_length_185_cov_1.333333_g78644_i0forward_frame_1 - 0.042 14.1 0.0 0.046 14.0 0.0 1.2 1 0 0 1 1 1 0 Potassium channel toxin Cytochrom_C_asm PF01578.20 NODE_86578_length_185_cov_1.333333_g78637_i0forward_frame_1 - 0.097 12.4 0.6 0.12 12.1 0.6 1.1 1 0 0 1 1 1 0 Cytochrome C assembly protein DUF4818 PF16089.5 NODE_86577_length_185_cov_1.333333_g78636_i0reverse_frame_1 - 0.032 14.7 0.0 0.035 14.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) MC1 PF05854.11 NODE_86573_length_185_cov_1.360000_g78632_i0forward_frame_1 - 0.065 13.5 1.0 0.079 13.3 0.5 1.5 1 1 0 1 1 1 0 Non-histone chromosomal protein MC1 WES_acyltransf PF03007.16 NODE_86571_length_185_cov_1.366667_g78630_i0forward_frame_1 - 0.0069 16.2 0.0 0.0069 16.2 0.0 1.0 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain MRP-S25 PF13741.6 NODE_86565_length_185_cov_1.420000_g78624_i0forward_frame_1 - 0.11 12.0 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein S25 RVT_2 PF07727.14 NODE_86564_length_185_cov_1.433333_g78623_i0reverse_frame_1 - 1.2e-05 25.1 0.0 1.3e-05 25.0 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) HCMVantigenic_N PF12154.8 NODE_86562_length_185_cov_1.446667_g78621_i0reverse_frame_1 - 0.069 13.3 5.2 0.069 13.3 5.2 2.5 1 1 1 2 2 2 0 Glycoprotein B N-terminal antigenic domain of HCMV ABC_membrane PF00664.23 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.00036 20.3 4.2 0.00041 20.1 4.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region CBP_BcsG PF11658.8 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.0013 17.3 2.3 0.0014 17.1 2.3 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsG Halogen_Hydrol PF10112.9 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.0028 17.7 0.4 0.0031 17.5 0.4 1.0 1 0 0 1 1 1 1 5-bromo-4-chloroindolyl phosphate hydrolysis protein Nucleoside_tran PF01733.18 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.01 15.2 2.6 0.011 15.2 2.6 1.0 1 0 0 1 1 1 0 Nucleoside transporter EphA2_TM PF14575.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.014 16.3 9.9 0.078 13.9 9.9 1.9 1 1 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Wzy_C PF04932.15 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.016 14.9 5.1 0.017 14.8 5.1 1.0 1 0 0 1 1 1 0 O-Antigen ligase Pex24p PF06398.11 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.02 13.9 1.1 0.023 13.7 1.1 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin AgrB PF04647.15 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.035 13.4 14.3 0.048 13.0 14.3 1.2 1 0 0 1 1 1 0 Accessory gene regulator B OSTbeta PF15048.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.079 13.1 1.6 0.084 13.0 1.6 1.2 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein Shisa PF13908.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.08 13.2 4.1 0.11 12.8 4.1 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF2615 PF11027.8 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.1 12.8 7.0 0.36 11.0 7.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2615) GRP PF07172.11 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.19 12.4 0.2 0.19 12.4 0.2 1.7 1 1 1 2 2 2 0 Glycine rich protein family O-antigen_lig PF13425.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.21 10.4 15.7 0.24 10.1 15.7 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF3488 PF11992.8 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.24 10.3 0.0 0.25 10.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) YMF19 PF02326.15 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 0.57 11.0 7.1 0.67 10.8 7.1 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 TMEM154 PF15102.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 2.1 8.2 17.2 13 5.7 17.2 1.9 1 1 0 1 1 1 0 TMEM154 protein family RSN1_TM PF13967.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 2.3 8.0 10.7 4 7.2 10.7 1.5 1 1 0 1 1 1 0 Late exocytosis, associated with Golgi transport OAD_gamma PF04277.13 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 2.5 8.8 16.0 22 5.7 16.0 1.9 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Herpes_LMP1 PF05297.11 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 4.2 6.5 4.4 4.7 6.3 4.4 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF4834 PF16118.5 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_1 - 9.3 7.3 23.6 36 5.4 23.6 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) RseC_MucC PF04246.12 NODE_86550_length_185_cov_1.500000_g78609_i0reverse_frame_1 - 0.37 10.7 3.4 0.45 10.5 3.4 1.2 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Totivirus_coat PF05518.11 NODE_86547_length_185_cov_1.513333_g78606_i0reverse_frame_1 - 0.1 10.7 0.1 0.11 10.5 0.1 1.0 1 0 0 1 1 1 0 Totivirus coat protein DUF4466 PF14725.6 NODE_86547_length_185_cov_1.513333_g78606_i0forward_frame_1 - 0.016 14.7 0.0 0.016 14.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4466) DUF2019 PF09450.10 NODE_86544_length_185_cov_1.526667_g78603_i0forward_frame_1 - 0.11 12.4 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2019) CaM_bdg_C0 PF10562.9 NODE_86503_length_185_cov_1.600000_g78562_i0forward_frame_1 - 0.03 14.4 0.1 0.046 13.8 0.1 1.3 1 0 0 1 1 1 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit DUF5494 PF17598.2 NODE_86493_length_185_cov_1.606667_g78552_i0forward_frame_1 - 0.033 14.3 0.0 0.037 14.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5494) LPD18 PF18832.1 NODE_86486_length_185_cov_1.660000_g78545_i0reverse_frame_1 - 0.048 13.7 0.0 0.057 13.5 0.0 1.1 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 18 Fer4_16 PF13484.6 NODE_86485_length_185_cov_1.673333_g78544_i0forward_frame_1 - 0.012 16.5 4.0 0.014 16.3 4.0 1.1 1 0 0 1 1 1 0 4Fe-4S double cluster binding domain OKR_DC_1_N PF03709.15 NODE_86480_length_185_cov_1.693333_g78539_i0forward_frame_1 - 0.045 14.0 0.0 0.046 14.0 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain HMMR_N PF15905.5 NODE_86476_length_185_cov_1.733333_g78535_i0reverse_frame_1 - 0.0052 16.3 3.8 0.0057 16.2 3.8 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Tup_N PF08581.10 NODE_86476_length_185_cov_1.733333_g78535_i0reverse_frame_1 - 0.026 14.8 7.5 0.034 14.4 7.5 1.2 1 0 0 1 1 1 0 Tup N-terminal DUF2313 PF10076.9 NODE_86476_length_185_cov_1.733333_g78535_i0reverse_frame_1 - 0.038 13.8 0.2 0.049 13.5 0.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein conserved in bacteria (DUF2313) TTL PF03133.15 NODE_86471_length_185_cov_1.760000_g78530_i0reverse_frame_1 - 4.5e-23 81.8 0.5 4.9e-23 81.7 0.5 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 NODE_86471_length_185_cov_1.760000_g78530_i0reverse_frame_1 - 0.14 11.4 0.1 0.16 11.2 0.1 1.0 1 0 0 1 1 1 0 YheC/D like ATP-grasp Nramp PF01566.18 NODE_86469_length_185_cov_1.760000_g78528_i0forward_frame_1 - 0.003 16.6 0.1 0.003 16.6 0.1 1.0 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein CorC_HlyC PF03471.17 NODE_86466_length_185_cov_1.786667_g78525_i0reverse_frame_1 - 2.5e-17 62.6 0.0 2.7e-17 62.6 0.0 1.0 1 0 0 1 1 1 1 Transporter associated domain DUF5422 PF17459.2 NODE_86460_length_185_cov_1.826667_g78519_i0forward_frame_1 - 0.054 13.7 6.1 0.057 13.6 6.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5422) Spheroidin PF05541.12 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_1 - 0.92 7.3 3.8 0.99 7.2 3.8 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein Alpha-mann_mid PF09261.11 NODE_86451_length_185_cov_1.866667_g78510_i0reverse_frame_1 - 8.3e-10 38.7 0.0 9.1e-10 38.6 0.0 1.0 1 0 0 1 1 1 1 Alpha mannosidase middle domain Cadherin PF00028.17 NODE_86446_length_185_cov_1.920000_g78505_i0reverse_frame_1 - 2.3e-08 34.3 0.1 2.5e-08 34.3 0.1 1.0 1 0 0 1 1 1 1 Cadherin domain Transglut_core2 PF13369.6 NODE_86443_length_185_cov_1.933333_g78502_i0forward_frame_1 - 0.00019 21.1 0.0 0.0002 20.9 0.0 1.1 1 0 0 1 1 1 1 Transglutaminase-like superfamily STAT1_TAZ2bind PF12162.8 NODE_86443_length_185_cov_1.933333_g78502_i0forward_frame_1 - 0.063 12.9 0.2 0.063 12.9 0.2 1.6 2 0 0 2 2 2 0 STAT1 TAZ2 binding domain GIT_SHD PF08518.11 NODE_86443_length_185_cov_1.933333_g78502_i0forward_frame_1 - 0.15 11.7 3.3 0.17 11.6 0.3 2.3 3 0 0 3 3 3 0 Spa2 homology domain (SHD) of GIT R_equi_Vir PF05526.11 NODE_86436_length_185_cov_2.000000_g78495_i0forward_frame_1 - 0.1 12.5 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Rhodococcus equi virulence-associated protein RVT_2 PF07727.14 NODE_86424_length_185_cov_2.120000_g78483_i0reverse_frame_1 - 7.5e-05 22.5 0.0 7.8e-05 22.4 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) NiFe_hyd_SSU_C PF14720.6 NODE_86424_length_185_cov_2.120000_g78483_i0forward_frame_1 - 0.032 14.6 0.3 0.063 13.6 0.1 1.6 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal UL11 PF11094.8 NODE_86424_length_185_cov_2.120000_g78483_i0forward_frame_1 - 0.045 13.6 0.5 0.076 12.9 0.5 1.4 1 0 0 1 1 1 0 Membrane-associated tegument protein RE_SinI PF09570.10 NODE_86422_length_185_cov_2.120000_g78481_i0forward_frame_1 - 0.092 12.0 0.0 0.097 11.9 0.0 1.0 1 0 0 1 1 1 0 SinI restriction endonuclease NIP_1 PF08995.10 NODE_86420_length_185_cov_2.133333_g78479_i0forward_frame_1 - 0.062 13.7 0.0 0.063 13.7 0.0 1.1 1 0 0 1 1 1 0 Necrosis inducing protein-1 LIME1 PF15332.6 NODE_86417_length_185_cov_2.133333_g78476_i0reverse_frame_1 - 0.052 13.1 0.1 0.059 13.0 0.1 1.0 1 0 0 1 1 1 0 Lck-interacting transmembrane adapter 1 Lyase_1 PF00206.20 NODE_86413_length_185_cov_2.133333_g78472_i0reverse_frame_1 - 3.1e-13 49.8 0.0 3.3e-13 49.7 0.0 1.0 1 0 0 1 1 1 1 Lyase Ubiq-Cytc-red_N PF09165.10 NODE_86410_length_185_cov_2.146667_g78469_i0forward_frame_1 - 0.02 15.8 0.0 0.025 15.4 0.0 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome c reductase 8 kDa, N-terminal Acetyltransf_3 PF13302.7 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 7.9e-08 33.1 0.0 7.9e-08 33.1 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 2.9e-07 30.7 0.0 2.9e-07 30.7 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 4.1e-05 23.9 0.0 4.6e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 0.0042 17.2 0.0 0.0051 16.9 0.0 1.1 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_10 PF13673.7 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 0.0091 15.9 0.0 0.0097 15.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 NODE_86409_length_185_cov_2.153333_g78468_i0reverse_frame_1 - 0.15 11.6 0.0 0.17 11.4 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase MNE1 PF13762.6 NODE_86401_length_185_cov_2.206667_g78460_i0reverse_frame_1 - 0.0066 16.4 0.1 0.0066 16.4 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial splicing apparatus component NinF PF05810.12 NODE_86401_length_185_cov_2.206667_g78460_i0reverse_frame_1 - 0.008 16.0 0.1 0.011 15.5 0.1 1.3 1 0 0 1 1 1 1 NinF protein Rho_N PF07498.12 NODE_86400_length_185_cov_2.226667_g78459_i0forward_frame_1 - 0.026 14.5 0.6 0.098 12.6 0.0 1.9 2 0 0 2 2 2 0 Rho termination factor, N-terminal domain FANC_SAP PF18081.1 NODE_86400_length_185_cov_2.226667_g78459_i0forward_frame_1 - 0.058 13.6 0.6 0.091 12.9 0.3 1.5 2 0 0 2 2 2 0 Fanconi anemia-associated nuclease SAP domain Defensin_beta PF00711.19 NODE_86398_length_185_cov_2.253333_g78457_i0reverse_frame_1 - 0.0031 17.5 0.7 0.0031 17.5 0.7 2.0 2 0 0 2 2 2 1 Beta defensin 7TM_GPCR_Srbc PF10316.9 NODE_86398_length_185_cov_2.253333_g78457_i0reverse_frame_1 - 0.13 11.8 0.4 0.14 11.7 0.4 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srbc DUF2768 PF10966.8 NODE_86394_length_185_cov_2.280000_g78453_i0reverse_frame_1 - 0.28 11.6 5.5 0.42 11.1 5.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2768) CBP_BcsG PF11658.8 NODE_86394_length_185_cov_2.280000_g78453_i0forward_frame_1 - 0.066 11.6 0.2 0.072 11.5 0.2 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG WEMBL PF05701.11 NODE_86393_length_185_cov_2.280000_g78452_i0reverse_frame_1 - 0.0072 15.1 1.6 0.0073 15.1 1.6 1.0 1 0 0 1 1 1 1 Weak chloroplast movement under blue light DUF3135 PF11333.8 NODE_86393_length_185_cov_2.280000_g78452_i0reverse_frame_1 - 0.087 13.1 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3135) DUF4577 PF15145.6 NODE_86392_length_185_cov_2.293333_g78451_i0forward_frame_1 - 0.13 12.3 0.7 0.13 12.3 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4577) Trehalose_recp PF06151.13 NODE_86391_length_185_cov_2.306667_g78450_i0forward_frame_1 - 0.015 13.9 1.0 0.015 13.9 1.0 1.0 1 0 0 1 1 1 0 Trehalose receptor IBN_N PF03810.19 NODE_86391_length_185_cov_2.306667_g78450_i0forward_frame_1 - 0.11 12.4 0.1 0.18 11.8 0.1 1.3 1 0 0 1 1 1 0 Importin-beta N-terminal domain Piezo_RRas_bdg PF12166.8 NODE_86390_length_185_cov_2.306667_g78449_i0reverse_frame_1 - 0.32 10.2 1.6 0.37 10.0 1.6 1.0 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain YesK PF14150.6 NODE_86390_length_185_cov_2.306667_g78449_i0forward_frame_1 - 0.011 16.0 0.0 0.012 15.8 0.0 1.1 1 0 0 1 1 1 0 YesK-like protein Spore_YhcN_YlaJ PF09580.10 NODE_86377_length_185_cov_2.433333_g78436_i0forward_frame_1 - 0.075 13.1 3.0 0.09 12.9 3.0 1.1 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KASH_CCD PF14662.6 NODE_86374_length_185_cov_2.486667_g78433_i0forward_frame_1 - 0.002 18.0 0.5 0.002 18.0 0.5 1.0 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH DUF3010 PF11215.8 NODE_86374_length_185_cov_2.486667_g78433_i0forward_frame_1 - 0.012 16.0 0.4 0.014 15.7 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3010) DivIC PF04977.15 NODE_86374_length_185_cov_2.486667_g78433_i0forward_frame_1 - 0.013 15.3 0.2 0.015 15.1 0.2 1.1 1 0 0 1 1 1 0 Septum formation initiator TBK1_CCD1 PF18394.1 NODE_86374_length_185_cov_2.486667_g78433_i0forward_frame_1 - 0.016 14.8 0.1 0.016 14.8 0.1 1.0 1 0 0 1 1 1 0 TANK-binding kinase 1 coiled-coil domain 1 V_ATPase_I PF01496.19 NODE_86372_length_185_cov_2.540000_g78431_i0reverse_frame_1 - 0.019 12.9 0.9 0.019 12.9 0.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MCD_N PF17408.2 NODE_86371_length_185_cov_2.560000_g78430_i0reverse_frame_1 - 0.1 12.8 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain Ca_hom_mod PF14798.6 NODE_86367_length_185_cov_2.606667_g78426_i0reverse_frame_1 - 0.01 15.0 0.3 0.01 14.9 0.3 1.1 1 0 0 1 1 1 0 Calcium homeostasis modulator zf-C3HC4_5 PF17121.5 NODE_86360_length_185_cov_2.746667_g78419_i0reverse_frame_1 - 0.12 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) MFS_1 PF07690.16 NODE_86360_length_185_cov_2.746667_g78419_i0forward_frame_1 - 0.00024 20.1 0.2 0.00027 20.0 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily zf-C2H2_4 PF13894.6 NODE_86355_length_185_cov_3.020000_g78414_i0forward_frame_1 - 0.0026 18.5 0.6 0.028 15.2 0.0 2.4 2 1 1 3 3 3 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 NODE_86355_length_185_cov_3.020000_g78414_i0forward_frame_1 - 0.057 13.2 0.2 0.14 11.9 0.1 1.7 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-BED PF02892.15 NODE_86355_length_185_cov_3.020000_g78414_i0forward_frame_1 - 0.29 11.2 2.4 0.21 11.6 0.8 1.7 2 0 0 2 2 2 0 BED zinc finger ODV-E18 PF10717.9 NODE_86354_length_185_cov_3.046667_g78413_i0forward_frame_1 - 0.14 12.0 2.7 0.18 11.7 2.7 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Tmemb_9 PF05434.11 NODE_86354_length_185_cov_3.046667_g78413_i0forward_frame_1 - 0.36 10.7 1.9 0.33 10.8 1.2 1.3 1 1 0 1 1 1 0 TMEM9 Inositol_P PF00459.25 NODE_86349_length_185_cov_3.340000_g78408_i0reverse_frame_1 - 0.088 12.3 0.1 0.092 12.2 0.1 1.0 1 0 0 1 1 1 0 Inositol monophosphatase family HTH_46 PF15977.5 NODE_86349_length_185_cov_3.340000_g78408_i0forward_frame_1 - 0.096 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DNA binding DUF4215 PF13948.6 NODE_86347_length_185_cov_3.533333_g78406_i0reverse_frame_1 - 1.6e-08 34.8 6.2 1.6e-08 34.8 6.2 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4215) Asp_Glu_race PF01177.22 NODE_86343_length_185_cov_3.940000_g78402_i0forward_frame_1 - 9.6e-08 32.1 0.0 1.1e-07 32.0 0.0 1.0 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase LRR_5 PF13306.6 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_1 - 0.022 14.7 0.1 0.025 14.6 0.1 1.1 1 0 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) DUF3760 PF12586.8 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_1 - 0.036 14.2 2.4 6 7.1 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3760) Glyoxalase_2 PF12681.7 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_1 - 0.045 13.7 0.6 0.17 11.8 0.5 1.9 1 1 0 1 1 1 0 Glyoxalase-like domain DUF2644 PF10841.8 NODE_86341_length_185_cov_4.406667_g78400_i0forward_frame_1 - 0.07 13.4 1.1 1.9 8.8 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2644) DUF639 PF04842.12 NODE_86341_length_185_cov_4.406667_g78400_i0forward_frame_1 - 0.15 11.4 0.1 0.17 11.3 0.1 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) GP3 PF03076.14 NODE_86329_length_185_cov_21.826667_g78388_i0forward_frame_1 - 0.03 14.4 0.7 0.03 14.4 0.7 1.1 1 0 0 1 1 1 0 Equine arteritis virus GP3 CENP-O PF09496.10 NODE_86320_length_185_cov_26.966667_g78379_i0reverse_frame_1 - 0.057 13.4 0.0 0.057 13.4 0.0 1.0 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component DUF4357 PF14267.6 NODE_86317_length_185_cov_29.246667_g78376_i0reverse_frame_1 - 0.76 9.8 2.5 5.8 6.9 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4357) Zn_Tnp_IS1595 PF12760.7 NODE_86314_length_185_cov_33.780000_g78373_i0forward_frame_1 - 0.86 9.6 8.1 3 7.9 6.9 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain TcdB_N PF12918.7 NODE_86306_length_185_cov_38.533333_g78365_i0forward_frame_1 - 0.04 14.2 0.0 0.27 11.6 0.0 1.9 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain HTH_43 PF09904.9 NODE_86303_length_185_cov_39.953333_g78362_i0forward_frame_1 - 0.013 15.4 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix ETRAMP PF09716.10 NODE_86301_length_185_cov_40.466667_g78360_i0forward_frame_1 - 0.16 12.0 0.5 0.17 12.0 0.5 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF5495 PF17599.2 NODE_86300_length_185_cov_40.546667_g78359_i0forward_frame_1 - 0.02 15.2 0.1 0.02 15.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5495) EF-hand_1 PF00036.32 NODE_86300_length_185_cov_40.546667_g78359_i0forward_frame_1 - 0.03 13.9 0.1 0.066 12.8 0.1 1.6 2 0 0 2 2 2 0 EF hand EF-hand_8 PF13833.6 NODE_86300_length_185_cov_40.546667_g78359_i0forward_frame_1 - 0.13 12.2 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 EF-hand domain pair Cadherin_tail PF15974.5 NODE_86283_length_185_cov_63.360000_g78342_i0reverse_frame_1 - 0.023 15.1 0.8 0.024 14.9 0.8 1.0 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region Vpu PF00558.19 NODE_86280_length_185_cov_65.200000_g78339_i0reverse_frame_1 - 0.9 9.4 6.3 0.55 10.0 4.9 1.4 1 1 0 1 1 1 0 Vpu protein Pentapeptide_3 PF13576.6 NODE_86276_length_185_cov_66.860000_g78335_i0reverse_frame_1 - 0.0067 16.6 0.3 0.01 16.0 0.3 1.3 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) RseC_MucC PF04246.12 NODE_86275_length_185_cov_68.993333_g78334_i0reverse_frame_1 - 0.15 12.0 0.5 0.18 11.8 0.5 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC APOBEC1 PF18769.1 NODE_86275_length_185_cov_68.993333_g78334_i0forward_frame_1 - 0.11 12.7 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 APOBEC1 zf-C5HC2 PF02928.16 NODE_86272_length_185_cov_70.346667_g78331_i0forward_frame_1 - 0.015 15.7 2.6 0.019 15.4 2.6 1.2 1 0 0 1 1 1 0 C5HC2 zinc finger RPT PF13446.6 NODE_86266_length_185_cov_80.106667_g78325_i0forward_frame_1 - 0.2 11.6 0.1 0.23 11.4 0.1 1.1 1 0 0 1 1 1 0 A repeated domain in UCH-protein AP3D1 PF06375.11 NODE_86260_length_185_cov_101.713333_g78319_i0forward_frame_1 - 3.1 8.0 12.0 3.5 7.8 12.0 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 Zn_ribbon_17 PF17120.5 NODE_86259_length_185_cov_111.613333_g78318_i0forward_frame_1 - 0.018 14.7 6.2 0.021 14.4 6.2 1.1 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Defensin_big PF14862.6 NODE_86258_length_185_cov_113.206667_g78317_i0forward_frame_1 - 0.83 10.0 6.4 1.4 9.3 6.4 1.5 1 1 0 1 1 1 0 Big defensin zf-primase PF09329.11 NODE_86254_length_185_cov_160.220000_g78313_i0forward_frame_1 - 0.057 13.2 1.0 0.079 12.8 1.0 1.3 1 0 0 1 1 1 0 Primase zinc finger N6_Mtase PF02384.16 NODE_86251_length_185_cov_233.313333_g78310_i0reverse_frame_1 - 0.098 11.9 0.1 0.1 11.8 0.1 1.0 1 0 0 1 1 1 0 N-6 DNA Methylase UcrQ PF02939.16 NODE_86246_length_185_cov_303.193333_g78305_i0forward_frame_1 - 0.095 12.6 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 UcrQ family Glyco_hydro_31 PF01055.26 NODE_86244_length_185_cov_442.633333_g78303_i0reverse_frame_1 - 8.8e-06 25.2 0.0 8.8e-06 25.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Ammonium_transp PF00909.21 NODE_86241_length_185_cov_15186.153333_g78300_i0reverse_frame_1 - 9.1e-08 31.2 0.0 9.3e-08 31.2 0.0 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Gp_dh_C PF02800.20 NODE_86240_length_185_cov_16706.220000_g78299_i0forward_frame_1 - 2e-15 56.7 0.0 2.1e-15 56.6 0.0 1.0 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WD40 PF00400.32 NODE_86237_length_186_cov_0.774834_g78296_i0reverse_frame_1 - 1.3e-10 41.7 0.0 1.3e-09 38.5 0.0 1.9 2 0 0 2 2 2 1 WD domain, G-beta repeat Ge1_WD40 PF16529.5 NODE_86237_length_186_cov_0.774834_g78296_i0reverse_frame_1 - 0.0032 16.5 0.0 0.0034 16.4 0.0 1.0 1 0 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 NODE_86237_length_186_cov_0.774834_g78296_i0reverse_frame_1 - 0.0075 16.5 0.0 0.0078 16.5 0.0 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 NODE_86237_length_186_cov_0.774834_g78296_i0reverse_frame_1 - 0.14 11.4 0.0 0.16 11.3 0.0 1.0 1 0 0 1 1 1 0 WD40-like domain OGFr_III PF04680.13 NODE_86227_length_186_cov_0.907285_g78286_i0reverse_frame_1 - 0.025 15.2 0.1 0.038 14.6 0.1 1.3 1 0 0 1 1 1 0 Opioid growth factor receptor repeat TrkA_TMD PF18613.1 NODE_86222_length_186_cov_0.947020_g78281_i0forward_frame_1 - 0.018 14.4 1.3 0.027 13.9 1.3 1.3 1 0 0 1 1 1 0 Tyrosine kinase receptor A trans-membrane domain Lamprin PF06403.11 NODE_86221_length_186_cov_0.947020_g78280_i0reverse_frame_1 - 0.00077 19.4 7.2 0.0017 18.3 7.2 1.6 1 1 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_86218_length_186_cov_0.973510_g78277_i0forward_frame_1 - 0.25 11.3 9.3 1.7 8.6 9.3 1.9 1 1 0 1 1 1 0 Lamprin Pectate_lyase_3 PF12708.7 NODE_86214_length_186_cov_0.986755_g78273_i0forward_frame_1 - 0.1 12.5 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 Pectate lyase superfamily protein Caudo_TAP PF02413.17 NODE_86212_length_186_cov_0.993377_g78271_i0forward_frame_1 - 0.00013 22.1 0.1 0.00015 21.9 0.1 1.1 1 0 0 1 1 1 1 Caudovirales tail fibre assembly protein, lambda gpK RAM PF15320.6 NODE_86211_length_186_cov_0.993377_g78270_i0forward_frame_1 - 0.097 13.3 0.0 0.098 13.3 0.0 1.1 1 0 0 1 1 1 0 mRNA cap methylation, RNMT-activating mini protein PheRS_DBD2 PF18554.1 NODE_86210_length_186_cov_1.006623_g78269_i0reverse_frame_1 - 1.7 8.7 7.6 3.8 7.6 1.7 2.2 2 0 0 2 2 2 0 PheRS DNA binding domain 2 Antimicrobial18 PF08130.11 NODE_86209_length_186_cov_1.006623_g78268_i0forward_frame_1 - 0.0064 16.5 2.7 0.0069 16.4 1.4 1.7 2 0 0 2 2 2 1 Type A lantibiotic family UPF0061 PF02696.14 NODE_86208_length_186_cov_1.006623_g78267_i0reverse_frame_1 - 0.05 12.4 0.0 0.055 12.2 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family Thiolase_C PF02803.18 NODE_86190_length_186_cov_1.052980_g78249_i0reverse_frame_1 - 0.00014 21.5 0.0 0.00015 21.4 0.0 1.1 1 0 0 1 1 1 1 Thiolase, C-terminal domain TMEM151 PF14857.6 NODE_86188_length_186_cov_1.052980_g78247_i0forward_frame_1 - 0.3 9.9 4.9 0.27 10.1 4.9 1.2 1 0 0 1 1 1 0 TMEM151 family DBD_Tnp_Hermes PF10683.9 NODE_86185_length_186_cov_1.052980_g78244_i0forward_frame_1 - 0.14 11.9 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Hermes transposase DNA-binding domain DDT PF02791.17 NODE_86171_length_186_cov_1.052980_g78230_i0reverse_frame_1 - 0.017 15.4 0.1 0.031 14.6 0.1 1.5 1 1 0 1 1 1 0 DDT domain Hydrophob_seed PF14547.6 NODE_86161_length_186_cov_1.059603_g78220_i0forward_frame_1 - 0.035 14.3 0.3 0.042 14.0 0.3 1.4 1 1 0 1 1 1 0 Hydrophobic seed protein DUF4807 PF16065.5 NODE_86159_length_186_cov_1.059603_g78218_i0reverse_frame_1 - 0.11 12.1 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4807) DUF434 PF04256.12 NODE_86158_length_186_cov_1.059603_g78217_i0forward_frame_1 - 0.09 12.5 0.5 0.14 11.9 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF434) BC10 PF06726.12 NODE_86153_length_186_cov_1.059603_g78212_i0forward_frame_1 - 0.03 14.6 0.0 0.037 14.3 0.0 1.1 1 0 0 1 1 1 0 Bladder cancer-related protein BC10 ShK PF01549.24 NODE_86147_length_186_cov_1.059603_g78206_i0forward_frame_1 - 0.53 10.9 4.4 3.2 8.4 2.9 2.6 1 1 1 2 2 2 0 ShK domain-like Nab2p_Zf1 PF18260.1 NODE_86147_length_186_cov_1.059603_g78206_i0forward_frame_1 - 1.6 8.7 6.3 2.6 8.0 0.8 2.9 1 1 2 3 3 3 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 DUF4735 PF15882.5 NODE_86138_length_186_cov_1.059603_g78197_i0forward_frame_1 - 0.15 11.5 0.1 0.14 11.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4735) Prok-E2_C PF14459.6 NODE_86134_length_186_cov_1.059603_g78193_i0forward_frame_1 - 0.07 13.3 0.1 0.072 13.2 0.1 1.0 1 0 0 1 1 1 0 Prokaryotic E2 family C ScdA_N PF04405.14 NODE_86129_length_186_cov_1.059603_g78188_i0forward_frame_1 - 0.18 11.5 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) Mfp-3 PF04202.13 NODE_86124_length_186_cov_1.059603_g78183_i0forward_frame_1 - 0.41 11.1 5.4 0.5 10.8 5.4 1.1 1 0 0 1 1 1 0 Foot protein 3 TMEM237 PF15383.6 NODE_86120_length_186_cov_1.059603_g78179_i0reverse_frame_1 - 0.075 12.1 0.2 0.075 12.1 0.2 1.1 1 0 0 1 1 1 0 Transmembrane protein 237 fn1 PF00039.18 NODE_86108_length_186_cov_1.059603_g78167_i0forward_frame_1 - 0.023 14.9 0.4 0.033 14.4 0.4 1.3 1 0 0 1 1 1 0 Fibronectin type I domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks439.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks439.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks439.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks439.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4659 PF15558.6 ORF117636 - 0.38 9.6 7.8 0.53 9.1 7.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4659) EamA PF00892.20 ORF115038 - 2.3e-14 53.7 30.1 7.4e-08 32.7 9.7 2.3 2 0 0 2 2 2 2 EamA-like transporter family Gram_pos_anchor PF00746.21 ORF115038 - 0.54 10.2 6.8 1.5 8.8 0.2 3.4 3 0 0 3 3 3 0 LPXTG cell wall anchor motif Solute_trans_a PF03619.16 ORF112621 - 1.8e-09 37.5 7.1 3.6e-09 36.6 7.1 1.5 1 1 0 1 1 1 1 Organic solute transporter Ostalpha WD40_3 PF15911.5 ORF112113 - 0.037 14.0 0.1 3.8 7.6 0.0 3.2 3 0 0 3 3 3 0 WD domain, G-beta repeat p450 PF00067.22 ORF110073 - 4.6e-48 164.1 0.3 7.4e-48 163.4 0.3 1.2 1 0 0 1 1 1 1 Cytochrome P450 AhpC-TSA PF00578.21 ORF104497 - 0.036 14.0 0.0 0.067 13.1 0.0 1.5 1 0 0 1 1 1 0 AhpC/TSA family RGM_N PF06535.12 ORF104497 - 0.12 12.6 0.1 0.39 10.9 0.0 1.9 2 0 0 2 2 2 0 Repulsive guidance molecule (RGM) N-terminus RNA_pol_inhib PF16857.5 ORF104497 - 0.19 11.5 0.0 0.38 10.6 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase inhibitor COPIIcoated_ERV PF07970.12 ORF101348 - 5.8e-51 173.5 0.1 9.5e-51 172.8 0.1 1.3 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter RCC1_2 PF13540.6 ORF94231 - 3.2e-14 52.3 20.7 0.31 10.9 0.1 8.2 8 0 0 8 8 8 6 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF94231 - 2e-05 24.8 3.3 17 5.5 0.0 6.3 6 1 2 8 8 8 1 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 ORF94231 - 6.2e-05 23.4 0.3 33 5.0 0.1 6.0 6 1 1 7 7 7 0 Spectrin repeat Cerato-platanin PF07249.12 ORF94231 - 0.00014 22.0 7.4 0.56 10.3 0.1 4.4 2 2 1 4 4 4 2 Cerato-platanin GST_C_2 PF13410.6 ORF94231 - 0.061 13.4 3.8 31 4.7 0.0 4.7 6 1 0 6 6 6 0 Glutathione S-transferase, C-terminal domain Methyltransf_29 PF03141.16 ORF94231 - 0.063 11.8 1.0 25 3.2 0.0 4.2 4 1 1 6 6 6 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Fez1 PF06818.15 ORF94231 - 6.8 7.1 6.6 88 3.5 0.1 4.5 5 0 0 5 5 5 0 Fez1 Choline_sulf_C PF12411.8 ORF94231 - 9.5 6.1 7.9 6 6.8 0.1 4.1 5 0 0 5 5 5 0 Choline sulfatase enzyme C terminal TPT PF03151.16 ORF88171 - 1.3e-35 123.2 12.7 1.6e-35 122.9 12.7 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family UAA PF08449.11 ORF88171 - 8.8e-11 41.5 16.8 9.4e-11 41.5 15.5 1.6 1 1 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF88171 - 9.3e-10 38.8 25.9 4.9e-05 23.5 4.3 3.0 2 2 0 2 2 2 2 EamA-like transporter family TMEM234 PF10639.9 ORF88171 - 0.062 13.3 3.6 0.091 12.8 0.2 2.4 2 0 0 2 2 2 0 Putative transmembrane family 234 CTP_transf_1 PF01148.20 ORF83219 - 5.5e-70 236.2 18.2 7.1e-70 235.8 18.2 1.1 1 0 0 1 1 1 1 Cytidylyltransferase family HEPN_AbiV PF18728.1 ORF78010 - 0.055 13.6 0.3 0.15 12.2 0.0 1.8 2 0 0 2 2 2 0 AbiV Asp PF00026.23 ORF77483 - 5.1e-17 62.3 0.0 6.2e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF77483 - 0.00014 21.7 0.0 0.00049 19.9 0.0 1.8 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Inositol_P PF00459.25 ORF75158 - 3.1e-21 76.1 0.0 3.4e-20 72.7 0.0 2.0 1 1 0 1 1 1 1 Inositol monophosphatase family LIM PF00412.22 ORF75158 - 0.089 13.0 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 LIM domain adh_short PF00106.25 ORF73425 - 7.9e-21 74.4 1.1 7.1e-12 45.2 0.1 3.2 2 1 1 3 3 3 3 short chain dehydrogenase adh_short_C2 PF13561.6 ORF73425 - 9e-10 38.5 5.6 8.7e-09 35.3 0.2 2.8 2 1 1 3 3 3 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF73425 - 6.5e-06 26.2 2.2 6.5e-06 26.2 2.2 1.9 2 1 0 2 2 2 1 KR domain DUF4158 PF13700.6 ORF73425 - 0.037 13.9 0.2 0.072 12.9 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) Shikimate_DH PF01488.20 ORF73425 - 0.1 12.7 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF5617 PF18493.1 ORF70562 - 0.85 9.8 4.5 0.65 10.1 0.7 2.7 3 1 0 3 3 3 0 Domain of unknown function (DUF5617) Ank_2 PF12796.7 ORF66641 - 2.4e-27 95.3 0.0 8.3e-09 35.9 0.0 3.6 2 2 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF66641 - 1.2e-18 67.2 0.0 1.8e-05 25.2 0.0 5.1 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF66641 - 6.5e-17 59.9 0.0 0.11 13.1 0.0 6.9 7 0 0 7 7 7 4 Ankyrin repeat Ank PF00023.30 ORF66641 - 4e-16 58.6 0.0 0.0053 17.2 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 ORF66641 - 2.1e-09 37.4 0.0 0.00054 20.2 0.0 4.9 3 2 2 5 5 5 2 Ankyrin repeats (many copies) V_ATPase_I_N PF18670.1 ORF66641 - 0.085 13.3 0.6 0.3 11.5 0.0 2.2 2 0 0 2 2 2 0 V-type ATPase subunit I, N-terminal domain Tudor_4 PF18358.1 ORF63229 - 0.082 12.5 0.3 7.9 6.2 0.0 2.5 2 0 0 2 2 2 0 Histone methyltransferase Tudor domain ESPR PF13018.6 ORF63229 - 0.15 11.9 0.3 0.4 10.5 0.3 1.8 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system zf-C2H2 PF00096.26 ORF51762 - 7.8e-10 38.7 23.2 0.00022 21.5 2.1 4.0 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF51762 - 1e-06 28.9 20.7 0.00013 22.2 2.3 4.5 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF51762 - 2.1e-06 28.1 15.3 0.008 16.9 1.5 3.8 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF51762 - 0.0071 16.1 0.6 0.0071 16.1 0.6 2.5 2 0 0 2 2 2 1 zinc-finger C2H2-type DUF1604 PF07713.13 ORF51762 - 0.032 14.0 1.4 0.14 12.0 1.4 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1604) BHD_1 PF10403.9 ORF51762 - 0.057 13.3 2.0 0.37 10.7 0.1 2.8 2 1 1 3 3 3 0 Rad4 beta-hairpin domain 1 zf_UBZ PF18439.1 ORF51762 - 0.37 10.4 2.4 3.1 7.5 0.2 2.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Zn_ribbon_SprT PF17283.2 ORF51762 - 0.42 10.6 4.9 0.16 11.9 0.9 2.4 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-C2H2_jaz PF12171.8 ORF51762 - 0.44 10.9 9.6 1.9 8.9 0.9 2.9 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-MYST PF17772.1 ORF51762 - 1.9 8.2 10.3 0.75 9.4 0.4 3.0 1 1 2 3 3 3 0 MYST family zinc finger domain Asp_Glu_race PF01177.22 ORF49019 - 0.13 12.1 0.1 0.41 10.5 0.1 1.8 1 1 0 1 1 1 0 Asp/Glu/Hydantoin racemase zf-RING-like PF08746.11 ORF49019 - 0.38 11.1 1.3 0.57 10.5 0.0 1.9 2 0 0 2 2 2 0 RING-like domain Abhydrolase_3 PF07859.13 ORF45468 - 1e-17 64.7 0.1 6.9e-17 62.0 0.1 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 ORF45468 - 2e-12 47.1 0.0 1.1e-08 34.8 0.0 2.1 2 0 0 2 2 2 2 Prolyl oligopeptidase family COesterase PF00135.28 ORF45468 - 2e-08 33.6 0.1 3.8e-08 32.7 0.1 1.4 1 1 0 1 1 1 1 Carboxylesterase family Hydrolase_4 PF12146.8 ORF45468 - 6e-05 22.4 0.0 0.0082 15.4 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 ORF45468 - 0.00033 20.3 0.0 0.00059 19.5 0.0 1.3 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_2 PF02230.16 ORF45468 - 0.0026 17.6 0.0 0.055 13.3 0.0 2.1 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.20 ORF45468 - 0.0036 17.0 0.1 1.9 8.0 0.2 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF45468 - 0.025 14.7 0.0 0.058 13.5 0.0 1.5 1 0 0 1 1 1 0 TAP-like protein Esterase_phd PF10503.9 ORF45468 - 0.099 12.1 0.9 20 4.6 0.0 3.1 3 1 0 3 3 3 0 Esterase PHB depolymerase Zip PF02535.22 ORF35729 - 2.6e-42 145.3 12.6 1.2e-40 139.8 12.6 2.0 1 1 0 1 1 1 1 ZIP Zinc transporter DUF4535 PF15054.6 ORF35729 - 0.16 11.8 0.0 0.43 10.4 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4535) DUF5617 PF18493.1 ORF33646 - 0.85 9.8 4.5 0.65 10.1 0.7 2.7 3 1 0 3 3 3 0 Domain of unknown function (DUF5617) DUF456 PF04306.13 ORF3073 - 0.0026 18.1 3.8 0.0056 17.0 3.8 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF456) TetR_C_14 PF17754.1 ORF3073 - 0.08 12.9 2.8 0.25 11.3 2.8 1.8 1 0 0 1 1 1 0 MftR C-terminal domain mRNA_cap_enzyme PF01331.19 ORF23972 - 1e-21 77.6 1.5 7.1e-11 42.3 0.7 2.3 2 0 0 2 2 2 2 mRNA capping enzyme, catalytic domain mRNA_cap_C PF03919.15 ORF23972 - 2.5e-10 40.9 0.4 8.7e-10 39.2 0.4 1.9 1 1 0 1 1 1 1 mRNA capping enzyme, C-terminal domain DNA_ligase_A_M PF01068.21 ORF23972 - 0.012 15.2 0.3 0.18 11.4 0.3 2.5 1 1 0 1 1 1 0 ATP dependent DNA ligase domain DUF975 PF06161.11 ORF20153 - 3.2 7.5 11.0 0.1 12.4 3.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF975) DUF5609 PF18429.1 ORF15177 - 1.9e-25 88.4 0.1 4.1e-25 87.3 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5609) HAD PF12710.7 ORF15177 - 1.1e-18 68.3 0.0 2e-18 67.5 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF15177 - 1.8e-14 54.1 0.0 4.8e-13 49.4 0.0 2.3 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF15177 - 2e-14 54.4 0.9 3.4e-14 53.6 0.7 1.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 ORF15177 - 0.00026 20.5 0.0 0.0032 16.9 0.0 2.0 2 0 0 2 2 2 1 Putative Phosphatase S6PP PF05116.13 ORF15177 - 0.0059 16.2 0.0 0.015 14.9 0.0 1.6 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase CC2-LZ PF16516.5 ORF149326 - 0.017 15.4 7.2 0.017 15.4 7.2 3.5 5 0 0 5 5 5 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator TRAF_BIRC3_bd PF16673.5 ORF149326 - 0.056 13.2 7.5 0.029 14.2 4.3 2.3 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain Sulfatase_C PF14707.6 ORF149326 - 0.12 13.1 6.8 0.45 11.3 0.7 2.9 3 0 0 3 3 3 0 C-terminal region of aryl-sulfatase Tropomyosin_1 PF12718.7 ORF149326 - 1.1 9.4 35.7 0.033 14.4 9.4 4.4 4 1 0 4 4 4 0 Tropomyosin like TMEM154 PF15102.6 ORF142591 - 0.00015 21.7 0.0 0.00032 20.6 0.0 1.6 1 0 0 1 1 1 1 TMEM154 protein family DUF4064 PF13273.6 ORF142591 - 0.0057 16.9 1.0 0.033 14.5 1.0 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF4064) Rax2 PF12768.7 ORF142591 - 0.03 13.8 5.7 0.88 9.0 5.7 2.5 1 1 0 1 1 1 0 Cortical protein marker for cell polarity BPD_transp_1 PF00528.22 ORF142591 - 0.053 13.3 0.1 0.053 13.3 0.1 2.1 2 1 1 3 3 3 0 Binding-protein-dependent transport system inner membrane component Stevor PF17410.2 ORF142591 - 0.23 11.0 1.6 0.32 10.5 0.9 1.6 1 1 0 1 1 1 0 Subtelomeric Variable Open Reading frame RIFIN PF02009.16 ORF142591 - 0.27 11.1 0.4 0.49 10.3 0.2 1.3 1 1 0 1 1 1 0 Rifin MFS_1 PF07690.16 ORF127679 - 1.2e-18 67.1 28.6 2.4e-11 43.2 27.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Pkinase PF00069.25 ORF122212 - 4.5e-34 118.0 0.0 6.1e-34 117.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF122212 - 2.3e-13 50.0 0.0 4.5e-13 49.1 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF122212 - 1.1e-08 34.3 0.0 2.5e-08 33.2 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF122212 - 0.01 15.8 0.0 0.02 14.8 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF122212 - 0.023 14.3 0.0 0.035 13.7 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 ORF122212 - 0.026 13.9 0.0 0.041 13.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF122212 - 0.11 11.8 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 Kinase-like CdiI PF07262.11 ORF108959 - 0.015 15.1 0.2 0.015 15.1 0.2 1.9 2 0 0 2 2 2 0 CDI immunity protein Neisseria_TspB PF05616.13 ORF108959 - 0.06 11.8 1.0 0.93 7.9 0.2 2.1 2 0 0 2 2 2 0 Neisseria meningitidis TspB protein DUF3498 PF12004.8 ORF103652 - 0.068 12.4 0.1 0.096 11.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) DUF4186 PF13811.6 ORF101915 - 0.023 14.7 0.5 0.023 14.7 0.5 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4186) Peptidase_C1 PF00112.23 ORF97536 - 6e-59 199.8 7.5 9.1e-59 199.2 7.5 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF97536 - 2.5e-12 47.1 7.8 7.1e-12 45.6 7.8 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) DUF2040 PF09745.9 ORF97362 - 1.4e-14 54.1 21.9 1.4e-14 54.1 21.9 3.8 3 1 0 3 3 3 1 Coiled-coil domain-containing protein 55 (DUF2040) Tetraspanin PF00335.20 ORF91327 - 6.9e-05 22.7 18.6 6.9e-05 22.7 18.6 2.4 1 1 2 3 3 3 2 Tetraspanin family MARVEL PF01284.23 ORF91327 - 0.014 15.4 3.8 0.014 15.4 3.8 1.8 2 0 0 2 2 2 0 Membrane-associating domain EphA2_TM PF14575.6 ORF91327 - 2.3 9.1 4.6 21 6.1 0.0 3.3 3 1 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain DUF4149 PF13664.6 ORF91327 - 3 8.2 7.4 9.8 6.6 0.6 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4149) TssN PF17555.2 ORF91327 - 4.8 6.5 12.3 0.38 10.1 7.4 1.6 2 0 0 2 2 2 0 Type VI secretion system, TssN Exo_endo_phos PF03372.23 ORF82805 - 0.049 13.1 0.8 0.16 11.4 0.8 1.9 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family DUF641 PF04859.12 ORF6834 - 0.14 12.5 5.7 0.17 12.2 0.1 2.9 3 0 0 3 3 3 0 Plant protein of unknown function (DUF641) Vps53_N PF04100.12 ORF6834 - 0.28 10.1 0.9 2.8 6.8 0.3 2.0 2 0 0 2 2 2 0 Vps53-like, N-terminal MMR_HSR1_Xtn PF16897.5 ORF65399 - 1e-41 141.2 1.3 1.7e-41 140.5 1.3 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 ORF65399 - 1.9e-19 69.9 0.0 4.3e-19 68.7 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 ORF65399 - 1.1e-17 63.8 0.0 2e-17 62.9 0.0 1.5 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 ORF65399 - 2.4e-09 36.9 0.0 6.6e-09 35.5 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B MeaB PF03308.16 ORF65399 - 0.0096 14.9 0.2 0.031 13.3 0.1 1.8 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Dynamin_N PF00350.23 ORF65399 - 0.023 14.7 0.0 0.37 10.8 0.0 2.2 1 1 1 2 2 2 0 Dynamin family ABC_tran PF00005.27 ORF65399 - 0.077 13.5 0.1 0.43 11.1 0.0 2.1 2 0 0 2 2 2 0 ABC transporter AA_kinase PF00696.28 ORF6137 - 1.5e-44 152.4 2.4 1.9e-44 152.1 2.4 1.1 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 ORF6137 - 1.5e-22 79.3 0.1 4.7e-22 77.7 0.1 1.9 1 0 0 1 1 1 1 PUA domain APH PF01636.23 ORF59074 - 0.32 10.9 2.6 0.66 9.9 0.0 2.3 3 0 0 3 3 3 0 Phosphotransferase enzyme family Jacalin PF01419.17 ORF58955 - 5.3e-15 55.5 2.7 5.1e-07 29.7 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain Oxidored_q6 PF01058.22 ORF44133 - 3.7e-19 68.8 0.0 6.1e-19 68.2 0.0 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit SGS PF05002.15 ORF3887 - 5.4e-28 96.9 2.8 5.4e-28 96.9 2.8 3.0 3 0 0 3 3 3 1 SGS domain CS PF04969.16 ORF3887 - 1.1e-07 32.8 1.5 2.6e-07 31.6 1.5 1.7 1 0 0 1 1 1 1 CS domain TPR_8 PF13181.6 ORF3887 - 0.045 14.0 2.2 1.1 9.7 0.1 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat Glyco_hydro_65C PF03633.15 ORF32070 - 0.11 12.4 0.3 0.4 10.6 0.2 2.1 1 1 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain zf-C3HC4_3 PF13920.6 ORF3168 - 5.1e-13 48.7 9.5 5.1e-13 48.7 9.5 2.8 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF3168 - 7e-08 32.2 9.5 7e-08 32.2 9.5 2.7 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF3168 - 2.4e-05 24.6 9.9 2.4e-05 24.6 9.9 3.0 3 0 0 3 3 3 1 Ring finger domain zf-RING_5 PF14634.6 ORF3168 - 0.0017 18.3 9.8 0.0017 18.3 9.8 3.0 2 1 1 3 3 3 1 zinc-RING finger domain CCDC53 PF10152.9 ORF3168 - 0.046 14.1 0.9 0.065 13.7 0.9 1.2 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex ApoM PF11032.8 ORF3168 - 0.13 11.9 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 ApoM domain zf-RING_UBOX PF13445.6 ORF3168 - 1.9 8.5 18.0 3 7.9 5.9 3.1 2 1 0 2 2 2 0 RING-type zinc-finger Med19 PF10278.9 ORF2564 - 0.068 13.1 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Glyco_hydro_7 PF00840.20 ORF23265 - 7.2e-16 57.9 1.6 1.3e-05 24.1 0.2 3.9 1 1 2 3 3 3 3 Glycosyl hydrolase family 7 MatE PF01554.18 ORF22839 - 1.5e-20 73.4 11.0 4.2e-16 59.0 5.0 2.4 2 0 0 2 2 2 2 MatE EIF_2_alpha PF07541.12 ORF16504 - 8e-29 100.1 1.7 2.6e-28 98.5 0.1 2.2 1 1 1 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 ORF16504 - 3e-10 40.3 0.4 8.1e-10 38.9 0.4 1.8 1 0 0 1 1 1 1 S1 RNA binding domain MGDG_synth PF06925.11 ORF16504 - 0.051 13.7 0.0 0.16 12.1 0.0 1.8 1 1 1 2 2 2 0 Monogalactosyldiacylglycerol (MGDG) synthase Prp18 PF02840.15 ORF16504 - 0.13 12.3 1.1 2.3 8.3 0.1 2.9 4 0 0 4 4 4 0 Prp18 domain DER1 PF04511.15 ORF142753 - 0.0025 17.8 14.7 0.0043 17.0 14.7 1.3 1 0 0 1 1 1 1 Der1-like family DUF1751 PF08551.10 ORF142753 - 0.0026 18.3 4.1 0.0026 18.3 4.1 2.1 1 1 1 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) Rhomboid PF01694.22 ORF142753 - 0.0096 15.9 3.1 0.017 15.1 3.1 1.4 1 0 0 1 1 1 1 Rhomboid family Aa_trans PF01490.18 ORF141745 - 4.9e-33 114.4 4.1 5.6e-33 114.3 4.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Peptidase_C1 PF00112.23 ORF140749 - 2.5e-69 233.7 7.8 2.5e-69 233.7 7.8 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF140749 - 2e-08 33.5 4.1 9.5e-05 21.3 0.1 2.5 2 1 1 3 3 3 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF140749 - 9.2e-08 32.4 0.5 2.2e-07 31.2 0.5 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Exo_endo_phos PF03372.23 ORF135405 - 0.049 13.1 0.8 0.16 11.4 0.8 1.9 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Amino_oxidase PF01593.24 ORF13321 - 1.8e-06 27.5 3.1 0.0049 16.2 1.7 2.7 1 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 ORF13321 - 0.00076 19.7 0.0 0.0017 18.6 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Tetraspanin PF00335.20 ORF132588 - 6.9e-05 22.7 18.6 6.9e-05 22.7 18.6 2.4 1 1 2 3 3 3 2 Tetraspanin family MARVEL PF01284.23 ORF132588 - 0.014 15.4 3.8 0.014 15.4 3.8 1.8 2 0 0 2 2 2 0 Membrane-associating domain EphA2_TM PF14575.6 ORF132588 - 2.3 9.1 4.6 21 6.1 0.0 3.3 3 1 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain DUF4149 PF13664.6 ORF132588 - 3 8.2 7.4 9.8 6.6 0.6 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4149) TssN PF17555.2 ORF132588 - 4.8 6.5 12.3 0.38 10.1 7.4 1.6 2 0 0 2 2 2 0 Type VI secretion system, TssN FMO-like PF00743.19 ORF128146 - 1.2e-31 109.7 0.0 2e-24 86.0 0.0 2.0 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF128146 - 7.5e-13 48.4 0.0 5.6e-11 42.2 0.0 2.8 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF128146 - 8.4e-08 31.7 0.1 1.2e-06 28.0 0.0 2.1 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 ORF128146 - 0.00012 21.4 0.0 0.0027 17.0 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_C PF03720.15 ORF128146 - 0.21 12.0 0.0 30 5.1 0.0 2.3 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Jacalin PF01419.17 ORF126696 - 2.2e-14 53.5 1.1 4.7e-06 26.6 0.2 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain Mem_trans PF03547.18 ORF110920 - 0.14 10.5 1.5 0.25 9.7 1.5 1.5 1 1 0 1 1 1 0 Membrane transport protein CBF PF03914.17 ORF110920 - 2.7 8.0 7.5 1.1 9.2 1.2 2.8 2 1 0 2 2 2 0 CBF/Mak21 family Pet100 PF09803.9 ORF110920 - 4.2 8.0 12.0 3 8.4 0.2 3.3 1 1 0 2 2 2 0 Pet100 Pkinase PF00069.25 ORF10341 - 1.6e-61 208.0 0.1 2.1e-61 207.6 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF10341 - 3.8e-33 114.9 0.0 5.1e-33 114.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF10341 - 1.8e-05 23.7 0.3 3.3e-05 22.9 0.3 1.5 1 1 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF10341 - 2.3e-05 23.9 0.0 4.4e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF10341 - 0.0082 15.5 0.0 0.24 10.7 0.0 2.7 3 0 0 3 3 3 1 Kinase-like Pox_ser-thr_kin PF05445.11 ORF10341 - 0.021 13.8 0.1 0.037 13.0 0.1 1.4 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase APH PF01636.23 ORF10341 - 0.04 13.8 0.0 0.06 13.3 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF10341 - 0.09 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase EF-hand_8 PF13833.6 ORF95406 - 0.0031 17.3 0.0 0.0095 15.8 0.0 1.9 1 1 1 2 2 2 1 EF-hand domain pair cNMP_binding PF00027.29 ORF91294 - 3.4e-34 116.8 0.0 9.3e-22 76.9 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain GABP-alpha PF11620.8 ORF91294 - 0.082 13.1 0.4 5.6 7.2 0.0 2.5 2 0 0 2 2 2 0 GA-binding protein alpha chain PKD_channel PF08016.12 ORF87083 - 0.00074 18.3 9.7 0.0011 17.8 9.7 1.2 1 0 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF87083 - 0.061 12.5 13.6 0.019 14.2 9.9 1.9 1 1 1 2 2 2 0 Ion transport protein DUF4231 PF14015.6 ORF87083 - 1.7 9.1 3.6 4.2 7.9 3.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) AAA_9 PF12781.7 ORF87034 - 2.1e-40 138.2 0.8 2.9e-40 137.7 0.0 1.7 2 0 0 2 2 2 1 ATP-binding dynein motor region MT PF12777.7 ORF87034 - 1.3e-19 70.4 0.3 1.8e-19 70.0 0.3 1.2 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor APG6_N PF17675.1 ORF87034 - 0.0015 19.1 5.2 0.0066 17.0 4.5 2.2 2 0 0 2 2 2 1 Apg6 coiled-coil region UPF0242 PF06785.11 ORF87034 - 0.011 15.9 0.6 0.017 15.2 0.6 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Raftlin PF15250.6 ORF87034 - 0.037 12.8 0.0 0.047 12.4 0.0 1.1 1 0 0 1 1 1 0 Raftlin Spc7 PF08317.11 ORF87034 - 0.041 12.7 10.9 0.019 13.9 8.9 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DHR10 PF18595.1 ORF87034 - 0.055 13.5 8.0 0.097 12.7 8.0 1.4 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain DUF4407 PF14362.6 ORF87034 - 0.069 12.5 4.9 0.098 12.0 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CENP-Q PF13094.6 ORF87034 - 0.092 13.0 4.0 0.18 12.0 4.0 1.4 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit AAA_13 PF13166.6 ORF87034 - 0.15 10.7 2.2 0.2 10.3 2.2 1.1 1 0 0 1 1 1 0 AAA domain V-ATPase_G_2 PF16999.5 ORF87034 - 0.29 11.6 11.8 0.75 10.2 11.8 1.6 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit SafA PF17073.5 ORF83865 - 0.076 13.0 4.9 1.6 8.7 1.2 3.5 2 0 0 2 2 2 0 Two-component-system connector protein Peripla_BP_2 PF01497.18 ORF78632 - 0.018 14.6 0.1 0.034 13.7 0.1 1.4 1 0 0 1 1 1 0 Periplasmic binding protein YtpI PF14007.6 ORF78266 - 0.045 13.9 1.5 0.16 12.1 1.5 1.9 1 0 0 1 1 1 0 YtpI-like protein CBP PF12192.8 ORF78266 - 0.41 10.9 5.2 1.8 8.8 1.9 2.5 2 0 0 2 2 2 0 Fungal calcium binding protein TMEM72 PF16054.5 ORF78266 - 1.9 8.1 5.8 4.2 7.0 5.8 1.5 1 0 0 1 1 1 0 Transmembrane protein family 72 Pkinase_Tyr PF07714.17 ORF7351 - 3.2e-43 147.9 0.0 3.8e-43 147.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF7351 - 2.4e-40 138.6 0.0 3.3e-40 138.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 ORF7351 - 0.014 14.8 0.0 0.024 14.0 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF7351 - 0.019 14.3 0.0 0.034 13.5 0.0 1.3 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF7351 - 0.082 12.8 0.1 0.14 12.1 0.1 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family Meiosis_expr PF15163.6 ORF7351 - 0.13 13.0 0.1 0.26 12.0 0.1 1.5 1 0 0 1 1 1 0 Meiosis-expressed Lectin_N PF03954.14 ORF71787 - 1.9 8.2 10.8 0.79 9.5 2.9 2.6 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain zf-B_box PF00643.24 ORF6984 - 1.8e-07 31.2 10.5 1.8e-07 31.2 10.5 3.7 2 1 1 3 3 3 1 B-box zinc finger zf-RING_2 PF13639.6 ORF6984 - 1.4e-06 28.5 16.3 1.4e-06 28.5 16.3 2.9 3 0 0 3 3 3 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF6984 - 0.0002 21.1 15.7 0.0002 21.1 15.7 3.0 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF6984 - 0.00041 20.3 10.2 0.00041 20.3 10.2 2.9 3 1 0 3 3 3 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF6984 - 0.001 18.8 18.2 0.001 18.8 18.2 2.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF6984 - 0.0012 18.7 15.8 0.0012 18.7 15.8 3.3 3 2 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) U-box PF04564.15 ORF6984 - 0.14 12.4 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 U-box domain zf-UDP PF14569.6 ORF6984 - 1.1 9.4 14.5 0.13 12.4 7.4 2.4 2 0 0 2 2 2 0 Zinc-binding RING-finger Ank_2 PF12796.7 ORF65445 - 4.1e-15 56.1 1.8 8e-05 23.2 0.0 4.1 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF65445 - 1.4e-12 47.8 4.2 4.6e-05 23.9 0.0 4.7 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF65445 - 1.8e-10 40.1 6.2 0.00075 19.8 0.0 6.1 6 0 0 6 6 6 2 Ankyrin repeat Ank PF00023.30 ORF65445 - 2.3e-07 30.9 4.9 0.015 15.8 0.0 5.1 5 0 0 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF65445 - 7.6e-07 29.3 10.0 0.019 15.3 0.1 5.2 4 2 2 6 6 6 2 Ankyrin repeats (many copies) NHL PF01436.21 ORF60075 - 3.3e-12 45.8 20.7 0.0087 16.1 0.4 8.1 8 1 0 8 8 8 5 NHL repeat CDtoxinA PF03498.14 ORF60075 - 0.01 15.4 0.2 0.6 9.7 0.0 2.4 2 0 0 2 2 2 0 Cytolethal distending toxin A/C domain Laminin_G_3 PF13385.6 ORF60075 - 0.065 13.4 0.4 0.21 11.7 0.1 1.9 2 0 0 2 2 2 0 Concanavalin A-like lectin/glucanases superfamily Kunitz_BPTI PF00014.23 ORF60075 - 0.092 13.0 0.7 0.092 13.0 0.7 2.0 2 0 0 2 2 2 0 Kunitz/Bovine pancreatic trypsin inhibitor domain Actin PF00022.19 ORF55955 - 6.7e-102 341.1 0.0 2.8e-100 335.8 0.0 2.0 1 1 0 1 1 1 1 Actin Cor1 PF04803.12 ORF55955 - 0.011 16.0 1.1 0.024 14.8 1.1 1.6 1 0 0 1 1 1 0 Cor1/Xlr/Xmr conserved region MreB_Mbl PF06723.13 ORF55955 - 0.012 14.5 0.0 0.071 11.9 0.0 1.9 2 0 0 2 2 2 0 MreB/Mbl protein FYVE PF01363.21 ORF52500 - 9.3e-18 64.1 1.0 2.2e-17 62.9 1.0 1.7 1 0 0 1 1 1 1 FYVE zinc finger DUF3337 PF11816.8 ORF52500 - 1.2e-06 28.5 0.0 1.9e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3337) RAWUL PF16207.5 ORF52500 - 9e-06 26.3 0.2 2.4e-05 24.9 0.2 1.7 1 0 0 1 1 1 1 RAWUL domain RING finger- and WD40-associated ubiquitin-like LRR_4 PF12799.7 ORF52500 - 0.0046 17.3 3.2 2.4 8.7 1.0 3.0 1 1 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 ORF52500 - 0.0047 16.9 3.3 0.26 11.4 0.1 3.0 3 0 0 3 3 3 2 Leucine Rich repeat FYVE_2 PF02318.16 ORF52500 - 0.45 10.7 3.6 1 9.6 3.6 1.5 1 0 0 1 1 1 0 FYVE-type zinc finger DUF1616 PF07760.11 ORF39563 - 0.015 14.7 0.4 1.3 8.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1616) DUF4094 PF13334.6 ORF38302 - 0.013 15.9 0.1 0.013 15.9 0.1 3.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4094) Pneumo_M2 PF07380.11 ORF38302 - 0.092 13.0 0.3 0.092 13.0 0.3 3.6 2 1 2 5 5 5 0 Pneumovirus M2 protein DUF812 PF05667.11 ORF36173 - 0.029 13.3 57.3 0.08 11.8 57.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF812) ELMO_CED12 PF04727.13 ORF36173 - 1 9.5 5.1 0.49 10.5 1.4 2.4 2 1 0 2 2 2 0 ELMO/CED-12 family EPSP_synthase PF00275.20 ORF34032 - 1.9e-112 376.0 0.4 2.2e-112 375.8 0.4 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Phage_gp49_66 PF13876.6 ORF34032 - 0.014 15.7 0.1 0.031 14.6 0.1 1.5 1 0 0 1 1 1 0 Phage protein (N4 Gp49/phage Sf6 gene 66) family Hexapep PF00132.24 ORF34032 - 0.062 13.0 1.8 11 5.9 0.0 3.6 3 0 0 3 3 3 0 Bacterial transferase hexapeptide (six repeats) Anoctamin PF04547.12 ORF29399 - 5.3e-11 42.0 0.0 5.6e-11 41.9 0.0 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel Rotamase PF00639.21 ORF27422 - 1.1e-08 35.9 0.0 3e-08 34.5 0.0 1.8 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF27422 - 0.00013 22.4 0.3 0.0014 19.2 0.3 2.3 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF27422 - 0.014 16.2 1.7 0.024 15.5 0.2 2.1 2 0 0 2 2 2 0 PPIC-type PPIASE domain DNA_pol3_beta_2 PF02767.16 ORF25807 - 6.7e-47 158.5 0.0 7.4e-41 139.0 0.0 3.3 3 1 0 3 3 3 2 DNA polymerase III beta subunit, central domain DNA_pol3_beta PF00712.19 ORF25807 - 2.1e-46 157.0 0.0 8.7e-41 138.8 0.0 3.1 3 0 0 3 3 3 3 DNA polymerase III beta subunit, N-terminal domain DNA_pol3_beta_3 PF02768.15 ORF25807 - 6.3e-46 155.1 0.8 1.4e-45 154.0 0.2 1.8 2 0 0 2 2 2 1 DNA polymerase III beta subunit, C-terminal domain TubC_N PF18563.1 ORF25807 - 0.076 13.0 0.0 1.5 8.9 0.0 2.8 3 0 0 3 3 3 0 TubC N-terminal docking domain 7tm_6 PF02949.20 ORF23019 - 0.0096 15.0 3.9 0.028 13.5 0.2 2.2 2 0 0 2 2 2 1 7tm Odorant receptor ArfGap PF01412.18 ORF23019 - 0.02 15.0 2.6 0.026 14.6 1.1 1.9 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf Ribosomal_60s PF00428.19 ORF23019 - 0.058 14.0 1.4 0.058 14.0 1.4 2.4 2 0 0 2 2 2 0 60s Acidic ribosomal protein V_ATPase_I PF01496.19 ORF23019 - 0.28 9.1 12.2 0.38 8.6 12.2 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1704 PF08014.11 ORF23019 - 1.3 7.9 10.8 2.4 7.1 10.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1704) Sporozoite_P67 PF05642.11 ORF151575 - 1.5 6.8 4.5 1.8 6.6 4.5 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen RCC1_2 PF13540.6 ORF149794 - 9.8e-11 41.2 34.4 0.12 12.2 0.0 9.4 9 0 0 9 9 9 7 Regulator of chromosome condensation (RCC1) repeat DDE_Tnp_1_3 PF13612.6 ORF149794 - 0.016 15.2 0.4 62 3.6 0.0 4.5 5 0 0 5 5 5 0 Transposase DDE domain DUF4984 PF16372.5 ORF149794 - 0.045 13.7 6.1 39 4.1 0.0 5.6 7 1 0 8 8 8 0 Domain of unknown function (DUF4984) NPV_P10 PF05531.12 ORF149794 - 0.95 10.0 4.8 18 5.9 0.2 4.6 6 2 1 7 7 7 0 Nucleopolyhedrovirus P10 protein Pkinase PF00069.25 ORF148620 - 6e-52 176.6 0.2 6e-52 176.6 0.2 2.2 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF148620 - 2.2e-21 76.3 1.5 6.4e-21 74.8 0.1 2.3 2 1 1 3 3 3 1 Protein tyrosine kinase EF-hand_7 PF13499.6 ORF148620 - 2.6e-18 66.2 1.1 1.2e-10 41.6 0.2 2.9 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF148620 - 1.1e-14 52.8 0.4 0.00048 19.5 0.0 3.8 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF148620 - 1.2e-14 52.9 0.7 3e-05 23.6 0.0 4.1 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF148620 - 2.3e-12 46.5 1.3 2.1e-06 27.5 0.1 3.5 2 2 1 3 3 3 3 EF-hand domain pair Kinase-like PF14531.6 ORF148620 - 9.9e-09 34.9 0.0 2.1e-08 33.9 0.0 1.5 2 0 0 2 2 2 1 Kinase-like EF-hand_5 PF13202.6 ORF148620 - 4.8e-07 29.0 0.1 0.0049 16.3 0.0 3.5 3 0 0 3 3 3 2 EF hand Pkinase_fungal PF17667.1 ORF148620 - 0.00012 21.1 0.0 0.00022 20.1 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase EF-hand_11 PF08976.11 ORF148620 - 0.014 16.2 0.1 0.08 13.8 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF148620 - 0.024 15.0 0.5 0.073 13.4 0.4 2.0 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region MgtE_N PF03448.17 ORF148620 - 0.054 14.1 1.5 0.55 10.9 2.3 2.3 2 0 0 2 2 2 0 MgtE intracellular N domain EF-hand_4 PF12763.7 ORF148620 - 0.088 12.8 0.9 0.24 11.3 0.1 2.1 2 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Ribosomal_L9_C PF03948.14 ORF148620 - 0.69 10.4 5.7 2.1 8.8 2.3 2.6 2 0 0 2 2 2 0 Ribosomal protein L9, C-terminal domain BIV_Env PF05858.12 ORF147934 - 0.1 10.8 0.0 0.14 10.3 0.0 1.1 1 0 0 1 1 1 0 Bovine immunodeficiency virus surface protein (SU) Peptidase_M54 PF07998.11 ORF144271 - 5.3e-05 23.3 1.7 0.00029 20.9 1.7 2.3 1 1 0 1 1 1 1 Peptidase family M54 Rubis-subs-bind PF09273.11 ORF142994 - 2 9.1 5.3 2.1 9.0 1.9 2.4 2 1 1 3 3 3 0 Rubisco LSMT substrate-binding PPR_2 PF13041.6 ORF142407 - 9.7e-06 25.7 0.1 0.00079 19.6 0.0 3.3 2 1 1 3 3 3 1 PPR repeat family PPR_long PF17177.4 ORF142407 - 0.00084 18.8 0.2 0.0023 17.3 0.0 1.7 2 0 0 2 2 2 1 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 ORF142407 - 0.0084 16.2 0.0 0.065 13.3 0.0 2.4 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR PF01535.20 ORF142407 - 0.036 14.3 4.6 24 5.5 0.0 4.6 6 0 0 6 6 6 0 PPR repeat BIV_Env PF05858.12 ORF139060 - 0.1 10.8 0.0 0.14 10.3 0.0 1.1 1 0 0 1 1 1 0 Bovine immunodeficiency virus surface protein (SU) His_kinase PF06580.13 ORF133102 - 6.6e-26 90.4 1.6 1.3e-25 89.5 1.6 1.5 1 0 0 1 1 1 1 Histidine kinase GAF_2 PF13185.6 ORF133102 - 6.8e-07 29.7 0.0 1.4e-06 28.7 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 ORF133102 - 1.1e-05 25.7 0.0 4.5e-05 23.8 0.0 2.0 2 0 0 2 2 2 1 GAF domain HATPase_c PF02518.26 ORF133102 - 0.00026 21.5 0.0 0.013 16.0 0.0 2.4 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SpoVT_C PF15714.5 ORF133102 - 0.00029 20.9 0.0 0.00067 19.7 0.0 1.6 1 0 0 1 1 1 1 Stage V sporulation protein T C-terminal, transcription factor DUF3958 PF13125.6 ORF133102 - 0.44 10.8 4.0 0.21 11.8 1.7 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3958) Chloroa_b-bind PF00504.21 ORF131313 - 4.7e-42 144.3 0.4 1.7e-27 97.0 0.1 2.2 2 0 0 2 2 2 2 Chlorophyll A-B binding protein RlmM_FDX PF18125.1 ORF127423 - 1.3e-31 108.9 0.2 3.9e-31 107.4 0.0 1.9 2 0 0 2 2 2 1 RlmM ferredoxin-like domain FtsJ PF01728.19 ORF127423 - 2e-09 37.8 0.0 3.7e-08 33.7 0.0 2.1 2 0 0 2 2 2 1 FtsJ-like methyltransferase DUF4222 PF13973.6 ORF127423 - 0.0021 17.6 0.1 0.51 10.0 0.1 3.4 3 0 0 3 3 3 1 Domain of unknown function (DUF4222) MIT_C PF16565.5 ORF127423 - 0.17 11.9 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Phospholipase D-like domain at C-terminus of MIT Asp_protease PF09668.10 ORF126649 - 3e-54 182.1 0.4 4.9e-54 181.4 0.4 1.3 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 ORF126649 - 1.5e-19 70.4 0.7 2.8e-19 69.5 0.1 1.8 2 0 0 2 2 2 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 ORF126649 - 4e-09 37.0 0.0 8.9e-09 35.9 0.0 1.6 1 0 0 1 1 1 1 Aspartyl protease ubiquitin PF00240.23 ORF126649 - 2.1e-08 33.8 0.2 4.1e-08 32.8 0.2 1.5 1 0 0 1 1 1 1 Ubiquitin family UBA PF00627.31 ORF126649 - 8.9e-08 31.9 0.2 2.1e-07 30.7 0.2 1.7 1 0 0 1 1 1 1 UBA/TS-N domain RVP_2 PF08284.11 ORF126649 - 5.3e-06 26.2 0.0 1e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Retroviral aspartyl protease RVP PF00077.20 ORF126649 - 0.0023 18.2 0.0 0.0048 17.2 0.0 1.6 1 0 0 1 1 1 1 Retroviral aspartyl protease Ubiquitin_4 PF18036.1 ORF126649 - 0.11 12.6 0.9 3.1 7.9 0.0 2.4 1 1 1 2 2 2 0 Ubiquitin-like domain Nrap_D3 PF17404.2 ORF126649 - 0.17 12.0 0.0 0.31 11.1 0.0 1.4 1 0 0 1 1 1 0 Nrap protein domain 3 zf-RING_2 PF13639.6 ORF120326 - 5.8e-11 42.5 9.8 5.8e-11 42.5 9.8 2.3 3 0 0 3 3 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF120326 - 3.2e-06 27.3 8.3 9.4e-06 25.8 8.3 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF120326 - 1e-05 25.2 4.6 1e-05 25.2 4.6 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF120326 - 3.5e-05 23.6 8.3 3.5e-05 23.6 8.3 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF120326 - 4.9e-05 23.3 2.2 4.9e-05 23.3 2.2 2.9 3 1 1 4 4 3 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF120326 - 5e-05 23.1 9.9 0.0002 21.1 9.9 2.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF120326 - 0.00027 20.9 3.3 0.00073 19.5 3.3 1.8 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF120326 - 0.0009 19.2 9.0 0.0009 19.2 9.0 2.6 3 0 0 3 3 3 1 zinc-RING finger domain Prok-RING_1 PF14446.6 ORF120326 - 0.0029 17.5 6.7 0.023 14.6 3.5 2.6 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 ORF120326 - 0.0082 16.0 5.5 0.0082 16.0 5.5 2.7 2 1 0 2 2 2 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF120326 - 0.012 15.8 8.1 0.035 14.3 8.1 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain Peptidase_A24 PF01478.18 ORF120326 - 0.014 15.8 0.1 0.074 13.5 0.0 2.1 2 1 0 2 2 2 0 Type IV leader peptidase family zf-C3HC4_3 PF13920.6 ORF120326 - 0.018 14.9 6.9 0.018 14.9 6.9 2.5 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Baculo_IE-1 PF05290.11 ORF120326 - 0.028 14.3 1.1 0.056 13.4 1.1 1.4 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) zf-RING_6 PF14835.6 ORF120326 - 0.2 11.5 2.1 0.66 9.9 2.1 1.9 1 0 0 1 1 1 0 zf-RING of BARD1-type protein RINGv PF12906.7 ORF120326 - 0.3 11.2 9.3 1.1 9.4 9.3 2.1 1 0 0 1 1 1 0 RING-variant domain zf-Nse PF11789.8 ORF120326 - 0.58 10.0 3.4 1.2 9.0 3.4 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_ribbon_17 PF17120.5 ORF120326 - 0.85 9.3 14.4 0.065 12.9 8.6 2.2 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF120326 - 1.7 8.9 9.4 1 9.5 5.9 2.6 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF120326 - 5 7.0 11.9 0.57 10.0 6.5 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain PHD PF00628.29 ORF120326 - 6.6 6.7 12.6 3.4 7.6 9.4 2.2 2 0 0 2 2 2 0 PHD-finger zf-RING-like PF08746.11 ORF120326 - 7.3 7.0 9.4 24 5.3 9.4 2.0 1 0 0 1 1 1 0 RING-like domain ubiquitin PF00240.23 ORF118259 - 0.00065 19.4 0.6 0.0011 18.7 0.6 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF118259 - 0.031 14.1 0.2 0.087 12.7 0.2 1.8 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like PI3K_rbd PF00794.18 ORF118259 - 0.098 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain CSTF2_hinge PF14327.6 ORF118259 - 0.35 11.4 3.4 8.9 6.8 0.7 3.4 4 0 0 4 4 4 0 Hinge domain of cleavage stimulation factor subunit 2 DUF3887 PF13026.6 ORF118259 - 1.3 9.8 4.9 0.36 11.7 0.6 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF3887) CLIP_SPH_Scar PF18399.1 ORF114489 - 0.13 12.4 7.7 0.21 11.7 0.6 2.8 2 0 0 2 2 2 0 Clip-domain serine protease homolog Scarface Pkinase PF00069.25 ORF112255 - 8.1e-53 179.5 0.0 1.1e-52 179.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF112255 - 1.7e-23 83.3 0.0 3.2e-23 82.3 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF112255 - 0.0033 16.8 0.0 0.0041 16.5 0.0 1.3 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF112255 - 0.0074 16.2 0.1 0.067 13.1 0.1 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF112255 - 0.017 13.9 0.4 0.032 13.0 0.4 1.5 1 1 0 1 1 1 0 Fungal protein kinase RIO1 PF01163.22 ORF112255 - 0.059 13.0 1.5 0.24 11.0 0.9 1.9 1 1 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF112255 - 0.063 12.6 0.2 0.098 12.0 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF112255 - 0.083 12.5 0.0 0.18 11.4 0.0 1.5 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 A_deaminase PF00962.22 ORF112024 - 7.8e-24 84.6 0.0 2.7e-23 82.8 0.0 1.7 1 1 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_1 PF01979.20 ORF112024 - 4.2e-05 23.0 0.1 7.9e-05 22.1 0.1 1.5 1 0 0 1 1 1 1 Amidohydrolase family TFX_C PF14601.6 ORF112024 - 0.027 14.4 1.6 12 6.0 0.7 3.2 3 0 0 3 3 3 0 DNA_binding protein, TFX, C-term TLP-20 PF06088.11 ORF112024 - 0.033 14.1 0.6 0.062 13.2 0.6 1.4 1 0 0 1 1 1 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) Amidohydro_2 PF04909.14 ORF112024 - 0.19 11.4 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Amidohydrolase PsaL PF02605.15 ORF111670 - 5.6e-30 104.0 1.2 1.7e-29 102.4 1.2 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI MFS_1 PF07690.16 ORF111000 - 3.9e-18 65.5 25.1 1e-14 54.3 18.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sec15 PF04091.12 ORF104433 - 7.3e-33 114.3 17.9 7.3e-33 114.3 17.9 1.7 1 1 1 2 2 2 1 Exocyst complex subunit Sec15-like DUF2451 PF10474.9 ORF104433 - 0.002 17.9 9.1 0.002 17.9 9.1 2.0 2 1 0 2 2 2 1 Protein of unknown function C-terminus (DUF2451) RIX1 PF08167.12 ORF104433 - 0.0058 16.4 0.7 0.018 14.8 0.1 2.1 2 0 0 2 2 2 1 rRNA processing/ribosome biogenesis SBDS_C PF09377.10 ORF104433 - 0.062 13.3 3.3 0.048 13.7 1.4 2.0 1 1 1 2 2 2 0 SBDS protein C-terminal domain HipN PF18253.1 ORF104433 - 0.11 12.2 0.0 0.47 10.2 0.0 2.1 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain Suv3_N PF18114.1 ORF104433 - 0.6 10.2 5.3 0.39 10.8 0.3 2.7 3 0 0 3 3 3 0 Suv3 helical N-terminal domain WD40 PF00400.32 ORF101710 - 0.062 14.2 0.0 47 5.1 0.0 3.6 3 0 0 3 3 3 0 WD domain, G-beta repeat Phage-A118_gp45 PF10653.9 ORF101710 - 0.093 12.8 0.9 2 8.5 0.0 2.7 3 0 0 3 3 3 0 Protein gp45 of Bacteriophage A118 Ank_2 PF12796.7 ORF100201 - 2e-21 76.4 1.4 4.8e-11 43.1 0.1 4.0 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF100201 - 2.9e-21 75.2 2.3 8.4e-08 32.3 0.1 4.8 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF100201 - 5e-15 54.1 0.5 0.019 15.4 0.0 6.6 5 1 1 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF100201 - 4.6e-11 43.0 0.6 0.0013 19.2 0.1 5.1 4 2 1 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF100201 - 2e-09 37.4 0.3 0.007 16.8 0.0 4.7 4 1 1 5 5 5 3 Ankyrin repeat Pepdidase_M14_N PF18027.1 NODE_16486_length_1093_cov_77.111531_g12526_i0reverse_frame_1 - 6.8e-16 58.6 0.3 1.3e-15 57.7 0.2 1.5 1 1 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain Peptidase_M14 PF00246.24 NODE_16486_length_1093_cov_77.111531_g12526_i0reverse_frame_1 - 1.1e-07 32.0 0.0 5.1e-07 29.8 0.0 2.0 1 1 1 2 2 2 1 Zinc carboxypeptidase LisH_TPL PF17814.1 NODE_16333_length_1097_cov_1406.175141_g12405_i0reverse_frame_2 - 0.045 13.4 0.5 0.11 12.2 0.1 1.9 2 0 0 2 2 2 0 LisH-like dimerisation domain Aminotran_5 PF00266.19 NODE_16333_length_1097_cov_1406.175141_g12405_i0forward_frame_2 - 3.5e-35 121.7 0.0 4.2e-35 121.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_5 PF00266.19 ORF95270 - 2e-44 152.1 0.0 2.2e-44 151.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V EI24 PF07264.11 ORF94874 - 0.0025 18.1 0.1 0.0039 17.4 0.1 1.3 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) SCIMP PF15050.6 ORF94874 - 8.6 6.8 7.6 2.4 8.6 1.2 2.4 2 0 0 2 2 2 0 SCIMP protein Pkinase PF00069.25 ORF93644 - 3.2e-33 115.2 0.0 6.7e-33 114.2 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF93644 - 3.9e-06 26.3 0.1 3.3e-05 23.3 0.1 2.3 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF93644 - 5.5e-05 22.6 0.0 0.13 11.5 0.0 2.2 2 0 0 2 2 2 2 Kinase-like Pox_ser-thr_kin PF05445.11 ORF93644 - 0.0069 15.4 0.1 0.01 14.8 0.1 1.2 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase APH PF01636.23 ORF93644 - 0.0073 16.3 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF93644 - 0.013 14.9 0.0 0.048 13.0 0.0 1.8 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 ORF93644 - 0.041 13.4 0.2 0.1 12.1 0.0 1.7 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Peptidase_C42 PF05533.12 ORF93644 - 0.088 12.9 0.1 2.5 8.2 0.0 2.4 2 0 0 2 2 2 0 Beet yellows virus-type papain-like endopeptidase C42 RIO1 PF01163.22 ORF93644 - 0.17 11.5 0.0 0.32 10.6 0.0 1.5 1 0 0 1 1 1 0 RIO1 family GD_N PF16030.5 ORF87845 - 0.087 13.1 2.2 0.095 13.0 0.3 2.1 2 0 0 2 2 2 0 Serine protease gd N-terminus Macro PF01661.21 ORF87845 - 4.8 7.3 5.1 1.4 9.0 0.2 2.7 2 1 1 3 3 3 0 Macro domain FHA PF00498.26 ORF78292 - 3.6e-15 56.1 0.0 8.8e-15 54.8 0.0 1.7 1 0 0 1 1 1 1 FHA domain DUF1768 PF08719.11 ORF78292 - 1.2e-12 48.4 0.2 2.6e-12 47.3 0.2 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF1768) Yop-YscD_cpl PF16697.5 ORF78292 - 5.6e-09 36.2 0.0 1.2e-08 35.1 0.0 1.5 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Complex1_LYR PF05347.15 ORF78292 - 1.8 8.7 5.7 3 8.0 0.3 3.2 3 0 0 3 3 3 0 Complex 1 protein (LYR family) GrpE PF01025.19 ORF76304 - 1.5e-25 89.8 0.4 1.5e-25 89.8 0.4 4.3 1 1 2 3 3 3 1 GrpE DUF2935 PF11155.8 ORF76304 - 0.0011 19.2 1.3 0.0011 19.2 1.3 2.8 1 1 0 2 2 2 1 Domain of unknown function (DUF2935) Spc7 PF08317.11 ORF76304 - 0.0064 15.4 53.3 0.0068 15.3 16.3 3.0 1 1 2 3 3 3 3 Spc7 kinetochore protein PspA_IM30 PF04012.12 ORF76304 - 0.01 15.4 3.8 0.01 15.4 3.8 3.0 2 1 0 2 2 2 0 PspA/IM30 family Synaptobrevin PF00957.21 ORF76304 - 0.023 14.5 1.4 0.023 14.5 1.4 3.4 3 1 1 5 5 5 0 Synaptobrevin HALZ PF02183.18 ORF76304 - 0.045 14.0 0.9 0.045 14.0 0.9 5.1 4 1 1 5 5 5 0 Homeobox associated leucine zipper GAS PF13851.6 ORF76304 - 0.067 12.5 51.2 0.18 11.1 8.1 3.1 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding HAUS-augmin3 PF14932.6 ORF76304 - 0.16 11.6 47.6 0.029 14.0 16.0 3.2 1 1 2 3 3 3 0 HAUS augmin-like complex subunit 3 DUF1664 PF07889.12 ORF76304 - 6.8 6.7 21.8 0.76 9.8 4.5 3.8 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) DUF812 PF05667.11 ORF76304 - 7.2 5.4 39.0 13 4.5 39.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF812) GD_N PF16030.5 ORF75833 - 0.087 13.1 2.2 0.095 13.0 0.3 2.1 2 0 0 2 2 2 0 Serine protease gd N-terminus Macro PF01661.21 ORF75833 - 4.8 7.3 5.1 1.4 9.0 0.2 2.7 2 1 1 3 3 3 0 Macro domain EFG_C PF00679.24 ORF71956 - 0.00034 20.6 0.0 0.0007 19.6 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_IV PF03764.18 ORF71956 - 0.0018 18.0 0.0 0.015 15.1 0.0 2.4 2 1 0 2 2 2 1 Elongation factor G, domain IV zf-RING_2 PF13639.6 ORF66692 - 6.5e-13 48.8 6.2 6.5e-13 48.8 6.2 2.6 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF66692 - 1.1e-10 41.6 5.1 1.1e-10 41.6 5.1 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF66692 - 7.2e-09 35.4 5.8 7.2e-09 35.4 5.8 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF66692 - 8e-09 35.1 2.4 8e-09 35.1 2.4 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF66692 - 5.8e-08 32.6 6.2 5.8e-08 32.6 6.2 2.6 2 1 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF66692 - 9.7e-08 31.8 4.3 9.7e-08 31.8 4.3 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF66692 - 3.2e-07 30.1 6.5 3.2e-07 30.1 6.5 2.4 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF66692 - 2.1e-05 24.5 0.7 2.1e-05 24.5 0.7 2.1 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger ECSCR PF15820.5 ORF66692 - 0.73 9.7 2.8 5.1 7.0 0.0 2.5 1 1 1 3 3 3 0 Endothelial cell-specific chemotaxis regulator EamA PF00892.20 ORF66684 - 1.2e-07 32.0 30.2 0.00048 20.3 12.2 2.3 2 0 0 2 2 2 2 EamA-like transporter family SoPB_HTH PF18090.1 ORF61273 - 2.6e-42 142.8 0.1 4.6e-42 142.0 0.1 1.4 1 0 0 1 1 1 1 Centromere-binding protein HTH domain ParBc PF02195.18 ORF61273 - 5.9e-11 42.5 0.0 1.1e-10 41.6 0.0 1.5 1 0 0 1 1 1 1 ParB-like nuclease domain BTB PF00651.31 ORF57302 - 0.00013 22.2 0.1 0.00027 21.1 0.1 1.6 1 0 0 1 1 1 1 BTB/POZ domain AP_endonuc_2 PF01261.24 ORF51083 - 2.4e-36 125.1 0.0 3.1e-36 124.8 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UxuA PF03786.13 ORF51083 - 0.019 13.8 0.0 0.037 12.9 0.0 1.4 1 0 0 1 1 1 0 D-mannonate dehydratase (UxuA) Glyco_hydro_114 PF03537.13 ORF51083 - 0.03 13.6 0.7 0.067 12.5 0.2 1.8 2 0 0 2 2 2 0 Glycoside-hydrolase family GH114 Methyltransf_11 PF08241.12 ORF51083 - 0.18 12.5 0.0 0.75 10.5 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain TruD PF01142.18 ORF45934 - 1.6e-11 43.7 0.0 2.1e-11 43.3 0.0 1.1 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) DUF3808 PF10300.9 ORF3948 - 2.7e-23 82.5 4.1 2.7e-23 82.5 4.1 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF3808) TPR_6 PF13174.6 ORF3948 - 4.1e-12 45.9 5.7 0.021 15.4 0.0 5.6 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF3948 - 4.1e-10 39.8 3.3 3.4e-05 24.1 0.2 3.7 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF3948 - 7.2e-08 32.0 15.6 0.16 12.2 1.6 5.2 4 1 0 4 4 4 4 Tetratricopeptide repeat SRP_TPR_like PF17004.5 ORF3948 - 6.9e-07 29.3 4.2 0.00065 19.7 0.0 2.8 1 1 2 3 3 3 2 Putative TPR-like repeat TPR_1 PF00515.28 ORF3948 - 1.6e-06 27.7 16.2 0.047 13.5 2.3 4.9 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF3948 - 4.4e-05 23.4 21.5 0.0058 16.7 0.1 6.0 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF3948 - 5.8e-05 23.5 0.1 12 6.5 0.0 4.1 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF3948 - 0.00016 22.3 0.0 2 9.1 0.0 3.6 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF3948 - 0.0019 18.1 6.0 12 6.1 0.1 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF3948 - 0.0042 16.5 0.0 4.3 6.6 0.0 3.1 1 1 0 1 1 1 1 MalT-like TPR region ANAPC3 PF12895.7 ORF3948 - 0.0052 17.0 1.7 0.0052 17.0 1.7 3.4 2 1 2 4 4 4 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF3948 - 0.0081 16.9 0.2 21 6.3 0.1 3.6 3 2 1 4 4 3 0 Tetratricopeptide repeat Sec16_C PF12931.7 ORF3948 - 0.05 13.2 1.0 0.086 12.5 1.0 1.5 1 0 0 1 1 1 0 Sec23-binding domain of Sec16 TPR_17 PF13431.6 ORF3948 - 0.063 13.7 3.1 47 4.7 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF3948 - 0.11 12.2 2.8 0.99 9.1 0.0 3.4 3 0 0 3 3 3 0 TPR repeat TPR_10 PF13374.6 ORF3948 - 0.16 11.9 0.2 20 5.2 0.1 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat zf-RING_2 PF13639.6 ORF2392 - 5.2e-12 45.9 8.5 5.2e-12 45.9 8.5 2.3 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF2392 - 6.8e-07 29.5 6.0 6.8e-07 29.5 6.0 2.1 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF2392 - 8.7e-07 28.6 5.4 8.7e-07 28.6 5.4 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF2392 - 5.6e-05 22.9 8.1 0.0002 21.2 8.1 2.0 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF2392 - 0.00015 21.5 6.5 0.00015 21.5 6.5 2.1 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF2392 - 0.00095 19.0 8.7 0.003 17.4 8.7 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF2392 - 0.0011 18.8 7.4 0.0011 18.8 7.4 2.4 2 0 0 2 2 2 1 zinc-RING finger domain TMEM174 PF15029.6 ORF2392 - 0.0084 15.9 0.2 0.015 15.0 0.2 1.3 1 0 0 1 1 1 1 Transmembrane protein 174 zf-RING_UBOX PF13445.6 ORF2392 - 0.011 15.7 8.4 0.011 15.7 8.4 2.3 3 0 0 3 3 2 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF2392 - 0.029 14.4 2.2 0.029 14.4 2.2 2.2 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 ORF2392 - 0.037 14.2 8.2 0.18 12.0 8.2 2.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING FA_desaturase PF00487.24 ORF2392 - 0.058 13.2 3.7 0.56 10.0 0.5 2.2 2 0 0 2 2 2 0 Fatty acid desaturase Mannosyl_trans4 PF15971.5 ORF2392 - 0.074 12.9 4.5 0.13 12.1 4.5 1.3 1 0 0 1 1 1 0 DolP-mannose mannosyltransferase Prok-RING_4 PF14447.6 ORF2392 - 0.085 12.7 5.8 0.23 11.3 5.8 1.8 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Cadherin_C_2 PF16492.5 ORF2392 - 0.088 13.6 0.0 0.088 13.6 0.0 2.6 4 0 0 4 4 1 0 Cadherin cytoplasmic C-terminal Wzy_C PF04932.15 ORF2392 - 0.16 11.6 3.3 0.23 11.1 0.0 2.1 2 0 0 2 2 2 0 O-Antigen ligase DNA_ligase_ZBD PF03119.16 ORF2392 - 0.39 10.8 11.7 1 9.5 2.9 2.9 3 0 0 3 3 2 0 NAD-dependent DNA ligase C4 zinc finger domain RINGv PF12906.7 ORF2392 - 0.43 10.7 7.5 1.2 9.3 7.5 1.8 1 0 0 1 1 1 0 RING-variant domain PDR_CDR PF06422.12 ORF2392 - 0.85 9.6 0.0 0.85 9.6 0.0 2.9 2 1 0 3 3 3 0 CDR ABC transporter Peptidase_M54 PF07998.11 ORF21413 - 6.7e-07 29.5 4.6 1.5e-06 28.4 4.6 1.7 1 1 0 1 1 1 1 Peptidase family M54 Peptidase_M10 PF00413.24 ORF21413 - 0.0002 21.3 0.0 0.00034 20.5 0.0 1.5 1 1 0 1 1 1 1 Matrixin Reprolysin_4 PF13583.6 ORF21413 - 0.0065 16.1 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.8 ORF21413 - 0.021 14.4 0.1 0.035 13.7 0.1 1.3 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Reprolysin_5 PF13688.6 ORF21413 - 0.045 13.9 0.0 0.067 13.3 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12 Reprolysin_3 PF13582.6 ORF21413 - 0.091 13.3 0.0 0.19 12.2 0.0 1.6 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_2 PF13574.6 ORF21413 - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.8 ORF21413 - 0.17 10.5 1.2 0.26 9.8 1.2 1.2 1 0 0 1 1 1 0 Putative peptidase family Lig_chan PF00060.26 ORF15132 - 0.097 12.5 0.1 0.1 12.4 0.1 1.3 1 0 0 1 1 1 0 Ligand-gated ion channel Ion_trans PF00520.31 ORF15132 - 0.11 11.7 2.4 0.16 11.2 2.4 1.2 1 0 0 1 1 1 0 Ion transport protein RRM_1 PF00076.22 ORF146401 - 1e-16 60.5 0.0 1.8e-16 59.7 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF146401 - 6.4e-05 23.0 0.0 0.00016 21.7 0.0 1.7 1 1 0 1 1 1 1 RNA recognition motif GNAT_like PF18407.1 ORF146401 - 0.028 14.8 3.8 0.09 13.1 3.2 2.2 2 0 0 2 2 2 0 GCN5-related N-acetyltransferase like domain TPR_12 PF13424.6 ORF14457 - 1.3e-10 41.4 31.5 0.005 17.1 4.3 4.2 2 1 2 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 ORF14457 - 0.19 12.6 35.1 1.6 9.7 0.8 6.6 4 3 2 6 6 6 0 Tetratricopeptide repeat D5_N PF08706.11 ORF14457 - 0.79 10.0 2.5 1.8 8.8 2.5 1.5 1 0 0 1 1 1 0 D5 N terminal like SET PF00856.28 ORF141153 - 8.5e-07 29.5 0.1 5.1e-06 27.0 0.0 1.9 2 0 0 2 2 2 1 SET domain FRB_dom PF08771.11 ORF141153 - 0.00021 21.6 0.2 0.00047 20.5 0.2 1.6 1 0 0 1 1 1 1 FKBP12-rapamycin binding domain Lipase_3 PF01764.25 ORF136227 - 4.1e-29 101.3 0.0 6.7e-29 100.6 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF136227 - 0.013 14.8 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Cutinase PF01083.22 ORF136227 - 0.014 15.3 0.0 0.027 14.4 0.0 1.5 1 1 0 1 1 1 0 Cutinase Abhydrolase_6 PF12697.7 ORF136227 - 0.035 14.7 0.0 0.045 14.3 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family PGAP1 PF07819.13 ORF136227 - 0.045 13.5 0.0 0.088 12.5 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein KbaA PF14089.6 ORF136227 - 0.14 12.0 0.0 0.25 11.2 0.0 1.3 1 0 0 1 1 1 0 KinB-signalling pathway activation in sporulation CHCH PF06747.13 ORF130449 - 0.0013 18.8 0.4 0.0045 17.1 0.4 1.9 1 0 0 1 1 1 1 CHCH domain DUF1690 PF07956.11 ORF130449 - 1 9.8 7.8 1.9 8.9 7.8 1.5 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) TTSSLRR PF12468.8 ORF126674 - 0.017 15.3 3.6 0.091 13.0 3.6 2.2 1 0 0 1 1 1 0 Type III secretion system leucine rich repeat protein MFS_1 PF07690.16 ORF11620 - 8.4e-24 84.1 53.0 2.3e-21 76.1 45.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily BT1 PF03092.16 ORF11620 - 0.00013 20.4 3.5 0.00013 20.4 3.5 2.7 2 2 1 3 3 3 1 BT1 family MFS_4 PF06779.14 ORF11620 - 0.058 12.7 28.3 0.079 12.2 28.3 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB UPF0242 PF06785.11 ORF11620 - 6.1 6.9 5.1 45 4.1 0.1 2.7 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF655 PF04919.12 ORF115720 - 0.073 13.0 1.5 3.3 7.6 0.0 3.4 3 2 0 4 4 4 0 Protein of unknown function (DUF655) PAN_4 PF14295.6 ORF114934 - 6.9e-07 29.1 11.0 7e-05 22.7 2.0 4.0 4 0 0 4 4 4 2 PAN domain CbtA PF09490.10 ORF113648 - 0.27 11.0 1.6 0.49 10.1 0.1 2.1 1 1 0 2 2 2 0 Probable cobalt transporter subunit (CbtA) ADH_N PF08240.12 ORF111454 - 1.2e-27 96.0 5.1 2.7e-27 94.8 5.1 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF111454 - 1.1e-20 73.9 0.0 2.2e-20 73.0 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 ORF111454 - 0.00025 20.5 0.1 0.00038 19.9 0.1 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF111454 - 0.0005 20.3 0.3 0.0014 18.8 0.3 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 ORF111454 - 0.0056 16.0 0.2 0.0099 15.2 0.2 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ADH_zinc_N_2 PF13602.6 ORF111454 - 0.024 15.7 0.0 0.048 14.7 0.0 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase adh_short PF00106.25 ORF111454 - 0.025 14.0 0.0 0.038 13.5 0.0 1.2 1 0 0 1 1 1 0 short chain dehydrogenase Shikimate_DH PF01488.20 ORF111454 - 0.025 14.6 0.0 0.04 14.0 0.0 1.2 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase XdhC_C PF13478.6 ORF111454 - 0.052 14.0 0.0 0.093 13.2 0.0 1.4 1 0 0 1 1 1 0 XdhC Rossmann domain Glu_dehyd_C PF16912.5 ORF111454 - 0.065 12.7 0.0 0.096 12.2 0.0 1.2 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus SAS4 PF15460.6 ORF108439 - 0.12 12.5 5.2 6.2 7.0 0.2 2.7 2 0 0 2 2 2 0 Something about silencing, SAS, complex subunit 4 DivIC PF04977.15 ORF108439 - 0.39 10.5 2.9 0.47 10.3 0.1 2.4 3 0 0 3 3 3 0 Septum formation initiator CRAL_TRIO PF00650.20 ORF105235 - 1.1e-23 83.7 0.4 1.1e-23 83.7 0.4 1.6 2 0 0 2 2 2 1 CRAL/TRIO domain ABC_tran PF00005.27 ORF102586 - 1e-31 110.2 0.0 1.5e-31 109.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 ORF102586 - 3.7e-19 69.0 0.3 8.1e-19 67.9 0.3 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 ORF102586 - 0.0046 16.4 0.0 0.0082 15.6 0.0 1.4 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF102586 - 0.0066 16.3 0.1 1.1 9.0 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF102586 - 0.0067 16.4 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase IstB_IS21 PF01695.17 ORF102586 - 0.01 15.6 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_22 PF13401.6 ORF102586 - 0.011 16.0 1.4 0.033 14.5 1.4 2.0 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF102586 - 0.016 15.6 0.0 0.024 15.0 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 ORF102586 - 0.031 14.0 0.1 0.057 13.2 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF102586 - 0.15 12.5 0.0 0.23 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF102586 - 0.21 10.9 0.2 1.1 8.5 0.1 1.9 2 0 0 2 2 2 0 KaiC Tub_N PF16322.5 ORF102586 - 0.22 11.9 0.6 0.39 11.1 0.6 1.3 1 0 0 1 1 1 0 Tubby N-terminal CRAL_TRIO PF00650.20 ORF101268 - 1.1e-23 83.7 0.4 1.1e-23 83.7 0.4 1.6 2 0 0 2 2 2 1 CRAL/TRIO domain Pkinase PF00069.25 ORF100720 - 1.2e-69 234.6 0.1 1.2e-69 234.6 0.1 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100720 - 3.8e-36 124.7 0.0 5.5e-36 124.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF100720 - 0.00016 21.7 0.0 0.0032 17.4 0.0 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF100720 - 0.0004 20.0 2.0 0.0004 20.0 2.0 1.9 2 0 0 2 2 2 1 Choline/ethanolamine kinase Kdo PF06293.14 ORF100720 - 0.00065 19.1 0.4 0.0011 18.3 0.4 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF100720 - 0.002 17.0 0.1 0.0054 15.6 0.0 1.7 2 0 0 2 2 2 1 Fungal protein kinase PSP1 PF04468.12 ORF100720 - 0.0067 16.7 0.9 0.09 13.1 0.8 2.4 1 1 0 1 1 1 1 PSP1 C-terminal conserved region ADP_PFK_GK PF04587.15 ORF100720 - 0.035 12.7 1.0 0.3 9.6 0.1 2.1 2 0 0 2 2 2 0 ADP-specific Phosphofructokinase/Glucokinase conserved region Dala_Dala_lig_C PF07478.13 ORF97562 - 7.7e-83 277.0 0.0 1.1e-82 276.5 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 ORF97562 - 1.7e-29 102.3 0.0 3.5e-29 101.3 0.0 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase N-terminus ATP-grasp PF02222.22 ORF97562 - 1.6e-13 50.6 0.0 3e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 ORF97562 - 1.1e-05 24.9 0.0 0.015 14.5 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATP-grasp_4 PF13535.6 ORF97562 - 0.00017 21.2 0.5 0.0024 17.5 0.5 2.3 1 1 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 ORF97562 - 0.03 13.9 0.0 0.14 11.7 0.0 1.9 2 0 0 2 2 2 0 RimK-like ATP-grasp domain GARS_A PF01071.19 ORF97562 - 0.097 12.4 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PTS_2-RNA PF01885.16 ORF97562 - 0.14 12.2 0.0 1.6 8.8 0.0 2.1 2 0 0 2 2 2 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Catalase PF00199.19 ORF94764 - 1.5e-129 432.5 0.3 1.9e-129 432.2 0.3 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 ORF94764 - 2e-21 75.9 0.0 4.2e-21 74.9 0.0 1.5 1 0 0 1 1 1 1 Catalase-related immune-responsive WD40 PF00400.32 ORF94629 - 3.9e-14 52.8 18.1 7.1e-05 23.5 0.1 7.5 8 0 0 8 8 8 3 WD domain, G-beta repeat WD40_like PF17005.5 ORF94629 - 2.1e-06 27.3 1.0 0.0013 18.1 0.1 3.1 1 1 1 3 3 3 2 WD40-like domain ANAPC4_WD40 PF12894.7 ORF94629 - 1.7e-05 25.0 0.2 0.38 11.1 0.0 4.5 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain PQQ PF01011.21 ORF94629 - 0.0011 18.7 1.1 0.38 10.8 0.2 4.2 4 0 0 4 4 4 1 PQQ enzyme repeat Nup160 PF11715.8 ORF94629 - 0.026 13.2 0.0 1.8 7.1 0.0 2.7 2 1 0 3 3 3 0 Nucleoporin Nup120/160 PQQ_3 PF13570.6 ORF94629 - 0.27 11.8 5.8 55 4.4 0.0 5.1 6 0 0 6 6 6 0 PQQ-like domain GAF PF01590.26 ORF84453 - 1.1e-05 26.1 0.0 0.00029 21.5 0.0 2.2 2 0 0 2 2 2 1 GAF domain UBA PF00627.31 ORF84240 - 2.9e-05 23.9 0.2 5e-05 23.1 0.2 1.4 1 0 0 1 1 1 1 UBA/TS-N domain RuvA_C PF07499.13 ORF84240 - 0.0047 17.4 0.0 0.011 16.2 0.0 1.6 1 0 0 1 1 1 1 RuvA, C-terminal domain IMS_HHH PF11798.8 ORF84240 - 0.027 14.8 0.0 0.079 13.3 0.0 1.8 1 0 0 1 1 1 0 IMS family HHH motif Thymidylate_kin PF02223.17 ORF83307 - 5.6e-41 140.3 0.0 8.2e-41 139.7 0.0 1.3 1 0 0 1 1 1 1 Thymidylate kinase zf-RING_2 PF13639.6 ORF79872 - 1.1e-09 38.4 10.0 1.1e-09 38.4 10.0 2.3 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF79872 - 2.6e-07 30.6 7.0 2.6e-07 30.6 7.0 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF79872 - 5.4e-07 29.4 11.2 5.4e-07 29.4 11.2 2.8 4 0 0 4 4 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF79872 - 6.8e-06 25.7 11.3 2.1e-05 24.2 11.3 1.9 1 0 0 1 1 1 1 RING-like zinc finger FANCL_C PF11793.8 ORF79872 - 1.4e-05 25.2 9.7 1.4e-05 25.2 9.7 2.1 2 0 0 2 2 2 1 FANCL C-terminal domain zf-rbx1 PF12678.7 ORF79872 - 2.4e-05 24.6 11.4 2.4e-05 24.6 11.4 2.8 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF79872 - 2.6e-05 24.0 8.8 2.6e-05 24.0 8.8 2.4 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF79872 - 0.00033 20.6 5.3 0.00033 20.6 5.3 2.7 2 1 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF79872 - 0.028 14.4 10.5 0.028 14.4 10.5 2.3 2 0 0 2 2 1 0 zinc-RING finger domain RAMP PF04901.13 ORF79872 - 0.036 14.1 0.1 0.036 14.1 0.1 2.8 3 0 0 3 3 3 0 Receptor activity modifying family zf-Nse PF11789.8 ORF79872 - 0.21 11.4 4.8 0.49 10.3 4.8 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit DUF4164 PF13747.6 ORF79345 - 2.4e-05 24.5 7.9 0.025 14.8 5.3 3.1 2 1 1 3 3 3 2 Domain of unknown function (DUF4164) Ca_chan_IQ PF08763.11 ORF79345 - 1.1 9.5 8.1 0.26 11.5 0.2 3.5 2 2 2 4 4 4 0 Voltage gated calcium channel IQ domain DUF2408 PF10303.9 ORF79345 - 4.6 7.8 20.4 3.2 8.3 13.2 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2408) SAICAR_synt PF01259.18 ORF78560 - 0.035 13.7 0.0 0.073 12.7 0.0 1.5 1 0 0 1 1 1 0 SAICAR synthetase SAICAR_synt PF01259.18 ORF78162 - 0.035 13.7 0.0 0.073 12.7 0.0 1.5 1 0 0 1 1 1 0 SAICAR synthetase ERO1 PF04137.15 ORF77429 - 0.073 12.2 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) Churchill PF06573.11 ORF76704 - 0.019 15.3 1.0 0.043 14.1 0.5 1.8 1 1 0 1 1 1 0 Churchill protein Patatin PF01734.22 ORF74376 - 4.4e-14 53.1 0.0 6.8e-14 52.5 0.0 1.3 1 0 0 1 1 1 1 Patatin-like phospholipase SapB_2 PF03489.17 ORF74376 - 0.14 12.3 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 Saposin-like type B, region 2 adh_short PF00106.25 ORF70347 - 1.1e-27 96.8 0.0 1e-24 87.1 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF70347 - 1.5e-13 50.9 0.0 3.8e-12 46.3 0.0 2.1 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF70347 - 2.9e-05 24.1 0.0 4.6e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 KR domain DUF2140 PF09911.9 ORF66524 - 0.0055 16.3 0.5 0.023 14.2 0.1 2.1 1 1 1 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2140) VSP PF03302.13 ORF66524 - 0.0086 15.0 4.0 0.013 14.4 4.0 1.3 1 0 0 1 1 1 1 Giardia variant-specific surface protein Furin-like_2 PF15913.5 ORF66524 - 0.011 15.9 1.1 0.022 14.9 1.1 1.4 1 0 0 1 1 1 0 Furin-like repeat, cysteine-rich PBECR3 PF18812.1 ORF66524 - 0.036 14.0 0.1 0.036 14.0 0.1 2.4 3 0 0 3 3 3 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 DMP12 PF16779.5 ORF66524 - 0.14 12.1 2.7 1.6 8.7 0.4 2.9 1 1 1 2 2 2 0 DNA-mimic protein DUF4164 PF13747.6 ORF60628 - 2.3e-05 24.6 7.9 0.025 14.8 5.3 3.1 2 1 1 3 3 3 2 Domain of unknown function (DUF4164) Ca_chan_IQ PF08763.11 ORF60628 - 1.8 8.8 8.9 0.27 11.5 0.2 3.5 2 2 2 4 4 4 0 Voltage gated calcium channel IQ domain DUF2408 PF10303.9 ORF60628 - 5.2 7.6 20.6 6.6 7.3 15.5 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF2408) DUF3439 PF11921.8 ORF57948 - 0.072 13.1 1.2 0.16 12.0 1.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) Channel_Tsx PF03502.13 ORF52393 - 3.4e-82 275.9 20.8 4e-82 275.7 20.8 1.0 1 0 0 1 1 1 1 Nucleoside-specific channel-forming protein, Tsx LPAM_1 PF08139.12 ORF52393 - 0.0018 18.6 2.1 0.0043 17.5 2.1 1.7 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site Dickkopf_N PF04706.12 ORF52140 - 0.0059 17.1 10.9 0.0059 17.1 10.9 5.7 4 2 1 5 5 5 1 Dickkopf N-terminal cysteine-rich region EF-hand_7 PF13499.6 ORF41711 - 0.09 13.2 0.1 0.35 11.4 0.1 1.9 1 0 0 1 1 1 0 EF-hand domain pair BACK PF07707.15 ORF41386 - 4.8e-11 42.7 0.6 3.6e-10 39.8 0.2 2.5 3 0 0 3 3 3 1 BTB And C-terminal Kelch BTB PF00651.31 ORF41386 - 9.1e-05 22.7 0.0 0.00021 21.5 0.0 1.6 1 0 0 1 1 1 1 BTB/POZ domain UreD PF01774.17 ORF41386 - 0.036 14.0 0.2 0.21 11.5 0.0 2.3 3 0 0 3 3 3 0 UreD urease accessory protein MFS_1 PF07690.16 ORF40070 - 5e-22 78.3 26.4 1.3e-15 57.2 19.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF40070 - 1e-11 44.8 12.5 1.4e-11 44.3 12.5 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 ORF40070 - 0.00015 20.5 0.6 0.00029 19.5 0.6 1.6 1 0 0 1 1 1 1 MFS/sugar transport protein MARVEL PF01284.23 ORF40070 - 0.0019 18.3 1.4 0.0019 18.3 1.4 3.4 1 1 3 4 4 4 1 Membrane-associating domain ATG22 PF11700.8 ORF40070 - 0.53 8.9 7.2 0.36 9.4 3.8 2.3 1 1 1 2 2 2 0 Vacuole effluxer Atg22 like Nicastrin PF05450.15 ORF3955 - 0.077 12.5 4.7 0.071 12.6 3.3 1.7 1 1 0 1 1 1 0 Nicastrin PGA2 PF07543.12 ORF39510 - 0.041 13.9 0.1 0.063 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein trafficking PGA2 Lustrin_cystein PF14625.6 ORF39510 - 0.17 12.3 5.3 0.58 10.6 5.3 2.0 1 0 0 1 1 1 0 Lustrin, cysteine-rich repeated domain EphA2_TM PF14575.6 ORF39510 - 0.26 12.2 0.1 0.26 12.2 0.1 2.7 3 0 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain DUF4690 PF15756.5 ORF39510 - 0.37 11.4 0.1 0.37 11.4 0.1 2.6 3 0 0 3 3 3 0 Small Novel Rich in Cartilage DAG1 PF05454.11 ORF39510 - 0.38 10.1 3.4 0.49 9.7 0.6 2.1 1 1 1 2 2 2 0 Dystroglycan (Dystrophin-associated glycoprotein 1) SAICAR_synt PF01259.18 ORF31747 - 0.035 13.7 0.0 0.073 12.7 0.0 1.5 1 0 0 1 1 1 0 SAICAR synthetase SH3_3 PF08239.11 ORF21805 - 2.1e-07 31.1 3.4 0.0062 16.8 0.8 2.8 3 0 0 3 3 3 2 Bacterial SH3 domain Ank_4 PF13637.6 ORF21805 - 1.4e-05 25.6 0.0 0.004 17.7 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF21805 - 8.6e-05 23.1 0.0 0.00044 20.8 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF21805 - 0.0071 16.6 0.1 0.5 10.8 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF21805 - 0.084 13.5 0.3 1.3 9.8 0.0 2.9 3 0 0 3 3 3 0 Ankyrin repeat SH3_4 PF06347.13 ORF21805 - 0.091 12.6 2.5 0.19 11.6 0.5 2.6 2 0 0 2 2 2 0 Bacterial SH3 domain DUF1204 PF06721.11 ORF21805 - 0.098 12.1 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1204) TRP PF06011.12 ORF18727 - 3.9e-05 22.6 6.6 6.2e-05 21.9 6.6 1.3 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks43.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks43.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks43.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks43.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:56 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PapA_C PF16911.5 NODE_86095_length_186_cov_1.079470_g78154_i0forward_frame_1 - 0.13 12.3 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus F-box-like PF12937.7 NODE_86085_length_186_cov_1.105960_g78144_i0forward_frame_1 - 0.021 14.7 0.6 0.028 14.3 0.6 1.2 1 0 0 1 1 1 0 F-box-like BES1_N PF05687.13 NODE_86083_length_186_cov_1.119205_g78142_i0reverse_frame_1 - 0.43 11.0 6.8 0.7 10.3 6.8 1.3 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal BRD4_CDT PF17105.5 NODE_86083_length_186_cov_1.119205_g78142_i0reverse_frame_1 - 3.8 7.2 9.7 1.4 8.6 7.3 1.6 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 Cu-binding_MopE PF11617.8 NODE_86074_length_186_cov_1.152318_g78133_i0forward_frame_1 - 0.07 13.3 0.4 0.63 10.3 0.0 2.1 2 0 0 2 2 2 0 Putative metal-binding motif CDRN PF05174.12 NODE_86068_length_186_cov_1.178808_g78127_i0forward_frame_1 - 0.022 14.5 0.1 0.031 14.0 0.1 1.2 1 0 0 1 1 1 0 Cysteine-rich D. radiodurans N terminus DnaJ_CXXCXGXG PF00684.19 NODE_86066_length_186_cov_1.192053_g78125_i0forward_frame_1 - 0.0064 16.8 0.1 0.0074 16.6 0.1 1.1 1 0 0 1 1 1 1 DnaJ central domain DUF975 PF06161.11 NODE_86065_length_186_cov_1.198675_g78124_i0reverse_frame_1 - 0.063 13.1 5.2 0.064 13.0 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF975) DUF4407 PF14362.6 NODE_86065_length_186_cov_1.198675_g78124_i0reverse_frame_1 - 0.15 11.4 0.7 0.16 11.3 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF2576 PF10845.8 NODE_86064_length_186_cov_1.198675_g78123_i0reverse_frame_1 - 0.16 11.6 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) GSK-3_bind PF05350.12 NODE_86064_length_186_cov_1.198675_g78123_i0forward_frame_1 - 0.026 13.8 0.2 0.026 13.8 0.2 1.0 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding Chordopox_G3 PF06129.12 NODE_86060_length_186_cov_1.211921_g78119_i0forward_frame_1 - 0.0023 18.6 0.4 0.0027 18.4 0.4 1.1 1 0 0 1 1 1 1 Chordopoxvirus G3 protein GASA PF02704.14 NODE_86054_length_186_cov_1.218543_g78113_i0forward_frame_1 - 0.028 14.6 5.8 0.048 13.8 5.8 1.3 1 0 0 1 1 1 0 Gibberellin regulated protein Ephrin_rec_like PF07699.13 NODE_86042_length_186_cov_1.251656_g78101_i0forward_frame_1 - 0.056 13.2 2.5 0.081 12.7 1.5 1.8 2 0 0 2 2 2 0 Putative ephrin-receptor like Mo-co_dimer PF03404.16 NODE_86018_length_186_cov_1.311258_g78077_i0forward_frame_1 - 0.065 13.3 0.1 0.067 13.2 0.1 1.0 1 0 0 1 1 1 0 Mo-co oxidoreductase dimerisation domain NDUFV3 PF15880.5 NODE_86017_length_186_cov_1.317881_g78076_i0reverse_frame_1 - 0.0018 18.3 0.7 0.0051 16.8 0.2 1.8 2 0 0 2 2 2 1 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial Mg296 PF09644.10 NODE_86016_length_186_cov_1.317881_g78075_i0reverse_frame_1 - 0.0047 17.0 0.7 0.0051 16.9 0.7 1.0 1 0 0 1 1 1 1 Mg296 protein DUF1385 PF07136.11 NODE_86012_length_186_cov_1.324503_g78071_i0reverse_frame_1 - 0.017 14.4 0.2 0.02 14.2 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1385) gp45-slide_C PF09116.10 NODE_85991_length_186_cov_1.390728_g78050_i0reverse_frame_1 - 0.04 14.0 0.2 0.047 13.7 0.2 1.1 1 0 0 1 1 1 0 gp45 sliding clamp, C terminal zf-CCHC_4 PF14392.6 NODE_85989_length_186_cov_1.403974_g78048_i0forward_frame_1 - 0.033 13.9 1.3 0.045 13.5 0.7 1.5 1 1 1 2 2 2 0 Zinc knuckle Tristanin_u2 PF16638.5 NODE_85983_length_186_cov_1.417219_g78042_i0forward_frame_1 - 0.23 12.3 2.1 0.31 11.9 2.1 1.2 1 0 0 1 1 1 0 Unstructured region on methyltransferase between zinc-fingers TRP PF06011.12 NODE_85974_length_186_cov_1.456954_g78033_i0forward_frame_1 - 0.0098 14.7 4.4 0.011 14.5 4.4 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel DUF3755 PF12579.8 NODE_85974_length_186_cov_1.456954_g78033_i0forward_frame_1 - 0.043 13.5 0.0 0.076 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3755) Pox_A32 PF04665.12 NODE_85973_length_186_cov_1.463576_g78032_i0reverse_frame_1 - 0.0083 15.6 0.0 0.009 15.5 0.0 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein MFS_1 PF07690.16 NODE_85972_length_186_cov_1.463576_g78031_i0forward_frame_1 - 0.00093 18.2 0.5 0.00099 18.1 0.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily RPN1_RPN2_N PF17781.1 NODE_85971_length_186_cov_1.470199_g78030_i0reverse_frame_1 - 3.3e-18 66.1 0.0 3.8e-18 66.0 0.0 1.0 1 0 0 1 1 1 1 RPN1/RPN2 N-terminal domain Nairovirus_M PF07948.11 NODE_85970_length_186_cov_1.470199_g78029_i0forward_frame_1 - 0.062 11.5 8.7 0.065 11.5 8.7 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like PetN PF03742.14 NODE_85969_length_186_cov_1.483444_g78028_i0reverse_frame_1 - 0.13 12.2 0.2 2.2 8.2 0.1 2.1 2 0 0 2 2 2 0 PetN DUF5042 PF16445.5 NODE_85967_length_186_cov_1.496689_g78026_i0reverse_frame_1 - 0.15 10.4 0.0 0.15 10.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5042) Neuropep_like PF15161.6 NODE_85942_length_186_cov_1.582781_g78001_i0reverse_frame_1 - 0.061 13.0 0.1 0.069 12.8 0.1 1.2 1 0 0 1 1 1 0 Neuropeptide-like DUF1053 PF06327.14 NODE_85939_length_186_cov_1.582781_g77998_i0forward_frame_1 - 0.14 12.7 6.0 0.15 12.7 6.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1053) RSF PF14876.6 NODE_85938_length_186_cov_1.582781_g77997_i0forward_frame_1 - 1.5 7.7 5.7 1.5 7.7 5.7 1.0 1 0 0 1 1 1 0 Respiratory growth transcriptional regulator ArgoL1 PF08699.10 NODE_85934_length_186_cov_1.582781_g77993_i0reverse_frame_1 - 0.072 12.8 0.0 0.097 12.4 0.0 1.3 1 0 0 1 1 1 0 Argonaute linker 1 domain Keratin_B2_2 PF13885.6 NODE_85932_length_186_cov_1.582781_g77991_i0reverse_frame_1 - 0.21 11.6 12.7 0.33 10.9 12.7 1.3 1 0 0 1 1 1 0 Keratin, high sulfur B2 protein c-SKI_SMAD_bind PF08782.10 NODE_85929_length_186_cov_1.589404_g77988_i0reverse_frame_1 - 0.077 13.2 0.6 0.085 13.1 0.6 1.1 1 0 0 1 1 1 0 c-SKI Smad4 binding domain Mtd_N PF18454.1 NODE_85917_length_186_cov_1.615894_g77976_i0forward_frame_1 - 0.085 12.9 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Major tropism determinant N-terminal domain Jas PF16135.5 NODE_85914_length_186_cov_1.629139_g77973_i0forward_frame_1 - 0.02 15.1 0.3 0.028 14.6 0.3 1.4 1 1 0 1 1 1 0 TPL-binding domain in jasmonate signalling Uso1_p115_head PF04869.14 NODE_85913_length_186_cov_1.668874_g77972_i0reverse_frame_1 - 0.0012 18.0 0.1 0.0013 18.0 0.1 1.0 1 0 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, head region VRP3 PF03536.15 NODE_85913_length_186_cov_1.668874_g77972_i0reverse_frame_1 - 0.13 11.7 0.0 0.15 11.6 0.0 1.0 1 0 0 1 1 1 0 Salmonella virulence-associated 28kDa protein bcl-2I13 PF12201.8 NODE_85913_length_186_cov_1.668874_g77972_i0forward_frame_1 - 0.043 13.7 0.0 0.045 13.6 0.0 1.0 1 0 0 1 1 1 0 Bcl2-interacting killer, BH3-domain containing zf-MYST PF17772.1 NODE_85908_length_186_cov_1.688742_g77967_i0reverse_frame_1 - 0.024 14.2 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 MYST family zinc finger domain AXIN1_TNKS_BD PF16646.5 NODE_85905_length_186_cov_1.701987_g77964_i0forward_frame_1 - 0.051 14.5 0.2 0.056 14.4 0.2 1.1 1 0 0 1 1 1 0 Axin-1 tankyrase binding domain Polyketide_cyc PF03364.20 NODE_85901_length_186_cov_1.721854_g77960_i0reverse_frame_1 - 1.2e-12 48.1 0.0 1.3e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 NODE_85901_length_186_cov_1.721854_g77960_i0reverse_frame_1 - 0.015 15.5 0.0 0.017 15.4 0.0 1.0 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport Notch PF00066.17 NODE_85897_length_186_cov_1.754967_g77956_i0forward_frame_1 - 0.022 15.2 0.3 0.032 14.7 0.3 1.3 1 0 0 1 1 1 0 LNR domain Ephrin_rec_like PF07699.13 NODE_85896_length_186_cov_1.754967_g77955_i0reverse_frame_1 - 0.0035 17.1 0.6 0.0047 16.7 0.6 1.2 1 0 0 1 1 1 1 Putative ephrin-receptor like TMEM252 PF15664.5 NODE_85893_length_186_cov_1.761589_g77952_i0forward_frame_1 - 0.074 12.8 0.4 0.087 12.6 0.4 1.2 1 0 0 1 1 1 0 Transmembrane protein 252 family Barttin PF15462.6 NODE_85887_length_186_cov_1.807947_g77946_i0reverse_frame_1 - 0.12 12.2 2.5 0.12 12.1 2.5 1.0 1 0 0 1 1 1 0 Bartter syndrome, infantile, with sensorineural deafness (Barttin) Ints3 PF10189.9 NODE_85885_length_186_cov_1.814570_g77944_i0forward_frame_1 - 0.0013 18.1 0.8 0.0014 17.9 0.8 1.0 1 0 0 1 1 1 1 Integrator complex subunit 3 DNA_pol_E_B PF04042.16 NODE_85881_length_186_cov_1.841060_g77940_i0reverse_frame_1 - 0.024 14.0 0.0 0.024 14.0 0.0 1.0 1 0 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B TK PF00265.18 NODE_85880_length_186_cov_1.847682_g77939_i0reverse_frame_1 - 0.095 12.6 1.5 0.095 12.6 1.5 1.0 1 0 0 1 1 1 0 Thymidine kinase Peptidase_S10 PF00450.22 NODE_85865_length_186_cov_1.947020_g77924_i0forward_frame_1 - 0.064 12.7 0.2 0.064 12.6 0.2 1.0 1 0 0 1 1 1 0 Serine carboxypeptidase Rop PF01815.16 NODE_85863_length_186_cov_1.953642_g77922_i0forward_frame_1 - 0.015 15.1 0.5 0.019 14.8 0.5 1.2 1 0 0 1 1 1 0 Rop protein TIP49_C PF17856.1 NODE_85858_length_186_cov_1.973510_g77917_i0reverse_frame_1 - 0.023 14.9 0.0 0.033 14.3 0.0 1.2 1 0 0 1 1 1 0 TIP49 AAA-lid domain RhgB_N PF09284.10 NODE_85857_length_186_cov_1.973510_g77916_i0forward_frame_1 - 0.084 12.4 0.0 0.09 12.3 0.0 1.0 1 0 0 1 1 1 0 Rhamnogalacturonan lyase B, N-terminal BLOC1S3 PF15753.5 NODE_85851_length_186_cov_2.006623_g77910_i0forward_frame_1 - 0.066 13.3 0.2 0.066 13.3 0.2 1.0 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 Ribosomal_S27e PF01667.17 NODE_85847_length_186_cov_2.019868_g77906_i0forward_frame_1 - 0.13 11.9 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 ORC6 PF05460.13 NODE_85842_length_186_cov_2.072848_g77901_i0forward_frame_1 - 0.021 14.1 0.2 0.021 14.1 0.2 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Med26 PF08711.11 NODE_85840_length_186_cov_2.086093_g77899_i0reverse_frame_1 - 0.016 15.2 0.1 0.022 14.8 0.1 1.4 1 0 0 1 1 1 0 TFIIS helical bundle-like domain CarbpepA_inh PF02977.15 NODE_85835_length_186_cov_2.105960_g77894_i0forward_frame_1 - 0.00017 21.3 0.8 0.00026 20.7 0.8 1.4 1 1 0 1 1 1 1 Carboxypeptidase A inhibitor Actin PF00022.19 NODE_85827_length_186_cov_2.145695_g77886_i0reverse_frame_1 - 7.7e-18 64.3 0.0 8.2e-18 64.2 0.0 1.0 1 0 0 1 1 1 1 Actin Pkinase PF00069.25 NODE_85823_length_186_cov_2.225166_g77882_i0forward_frame_1 - 0.064 12.6 0.0 0.073 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain DUF3824 PF12868.7 NODE_85821_length_186_cov_2.231788_g77880_i0reverse_frame_1 - 0.43 11.2 3.9 0.5 11.0 3.9 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) TPR_12 PF13424.6 NODE_85817_length_186_cov_2.245033_g77876_i0reverse_frame_1 - 0.0096 16.2 0.2 0.013 15.7 0.2 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat EC042_2821 PF18740.1 NODE_85815_length_186_cov_2.264901_g77874_i0forward_frame_1 - 0.19 11.6 2.6 0.21 11.4 2.6 1.0 1 0 0 1 1 1 0 EC042_2821-lke REase PMSI1 PF15322.6 NODE_85809_length_186_cov_2.311258_g77868_i0forward_frame_1 - 0.096 12.1 0.2 0.11 11.9 0.2 1.1 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative GLTP PF08718.11 NODE_85805_length_186_cov_2.357616_g77864_i0forward_frame_1 - 0.085 13.1 0.1 0.093 13.0 0.1 1.0 1 0 0 1 1 1 0 Glycolipid transfer protein (GLTP) TBCC PF07986.12 NODE_85803_length_186_cov_2.370861_g77862_i0reverse_frame_1 - 0.029 14.1 1.7 0.035 13.8 1.7 1.1 1 0 0 1 1 1 0 Tubulin binding cofactor C CCD PF07860.11 NODE_85802_length_186_cov_2.377483_g77861_i0reverse_frame_1 - 0.26 11.3 0.9 0.29 11.2 0.9 1.0 1 0 0 1 1 1 0 WisP family C-Terminal Region Spore_III_AF PF09581.10 NODE_85800_length_186_cov_2.403974_g77859_i0forward_frame_1 - 0.092 12.8 0.3 0.1 12.6 0.3 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) ShK PF01549.24 NODE_85797_length_186_cov_2.443709_g77856_i0reverse_frame_1 - 0.022 15.3 0.3 0.033 14.7 0.3 1.3 1 0 0 1 1 1 0 ShK domain-like DUF3357 PF11837.8 NODE_85797_length_186_cov_2.443709_g77856_i0forward_frame_1 - 0.16 12.4 0.2 0.17 12.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) Deltaretro_Tax PF05599.11 NODE_85795_length_186_cov_2.450331_g77854_i0reverse_frame_1 - 0.078 13.5 0.1 0.096 13.2 0.1 1.1 1 0 0 1 1 1 0 Deltaretrovirus Tax protein zf-C2H2_11 PF16622.5 NODE_85788_length_186_cov_2.582781_g77847_i0reverse_frame_1 - 2 8.3 8.4 3.1 7.6 5.9 2.4 2 1 0 2 2 2 0 zinc-finger C2H2-type RVT_3 PF13456.6 NODE_85786_length_186_cov_2.596026_g77845_i0reverse_frame_1 - 6.2e-08 32.5 0.0 6.3e-08 32.5 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 NODE_85786_length_186_cov_2.596026_g77845_i0reverse_frame_1 - 5.7e-06 26.6 0.0 5.9e-06 26.5 0.0 1.0 1 0 0 1 1 1 1 RNase H Polysacc_synt PF01943.17 NODE_85779_length_186_cov_2.748344_g77838_i0reverse_frame_1 - 0.0018 17.7 0.2 0.002 17.6 0.2 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein FANCI_S1 PF14675.6 NODE_85775_length_186_cov_2.860927_g77834_i0forward_frame_1 - 0.17 11.5 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 FANCI solenoid 1 MRP-L47 PF06984.13 NODE_85772_length_186_cov_2.907285_g77831_i0forward_frame_1 - 0.05 13.7 0.6 0.062 13.4 0.6 1.2 1 0 0 1 1 1 0 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) TB2_DP1_HVA22 PF03134.19 NODE_85770_length_186_cov_2.953642_g77829_i0forward_frame_1 - 0.038 13.9 0.1 0.039 13.9 0.1 1.1 1 0 0 1 1 1 0 TB2/DP1, HVA22 family Drf_GBD PF06371.13 NODE_85770_length_186_cov_2.953642_g77829_i0forward_frame_1 - 0.097 12.2 0.1 0.1 12.1 0.1 1.1 1 0 0 1 1 1 0 Diaphanous GTPase-binding Domain Ycf70 PF17382.2 NODE_85766_length_186_cov_3.092715_g77825_i0reverse_frame_1 - 0.1 13.0 1.2 0.11 12.9 1.2 1.2 1 0 0 1 1 1 0 Uncharacterized Ycf70-like AZUL PF16558.5 NODE_85762_length_186_cov_3.483444_g77821_i0forward_frame_1 - 0.039 14.2 0.3 0.053 13.8 0.3 1.2 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A Ig_C17orf99 PF17736.1 NODE_85760_length_186_cov_3.675497_g77819_i0forward_frame_1 - 0.043 13.9 0.0 0.043 13.9 0.0 1.1 1 0 0 1 1 1 0 C17orf99 Ig domain C5HCH PF17982.1 NODE_85759_length_186_cov_3.827815_g77818_i0forward_frame_1 - 0.011 15.9 2.7 0.014 15.5 2.7 1.2 1 0 0 1 1 1 0 NSD Cys-His rich domain cNMP_binding PF00027.29 NODE_85758_length_186_cov_4.039735_g77817_i0reverse_frame_1 - 0.13 12.3 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain Arc_PepC_II PF06847.11 NODE_85752_length_186_cov_8.589404_g77811_i0reverse_frame_1 - 0.13 12.7 0.1 0.14 12.7 0.1 1.1 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II Nudix_N_2 PF14803.6 NODE_85751_length_186_cov_10.867550_g77810_i0reverse_frame_1 - 0.0086 16.0 0.7 0.013 15.4 0.7 1.2 1 0 0 1 1 1 1 Nudix N-terminal CAP PF00188.26 NODE_85748_length_186_cov_17.152318_g77807_i0forward_frame_1 - 0.19 12.6 0.0 0.25 12.2 0.0 1.3 1 1 0 1 1 1 0 Cysteine-rich secretory protein family MSP1a PF11670.8 NODE_85742_length_186_cov_23.072848_g77801_i0reverse_frame_1 - 0.063 12.6 1.9 0.074 12.3 1.9 1.0 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) ALC PF17527.2 NODE_85738_length_186_cov_27.443709_g77797_i0forward_frame_1 - 0.01 15.5 0.3 0.011 15.3 0.3 1.1 1 0 0 1 1 1 1 Phage ALC protein DUF3165 PF11364.8 NODE_85735_length_186_cov_28.437086_g77794_i0forward_frame_1 - 0.053 13.9 1.1 0.14 12.5 1.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3165) Porphyrn_cat_1 PF18206.1 NODE_85730_length_186_cov_31.536424_g77789_i0reverse_frame_1 - 0.031 14.9 0.1 0.037 14.6 0.1 1.1 1 0 0 1 1 1 0 Porphyranase catalytic subdomain 1 RCR PF12273.8 NODE_85723_length_186_cov_32.867550_g77782_i0reverse_frame_1 - 0.13 12.9 0.0 0.13 12.9 0.0 1.1 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red preSET_CXC PF18264.1 NODE_85714_length_186_cov_35.205298_g77773_i0forward_frame_1 - 0.61 10.6 6.9 0.98 9.9 6.9 1.4 1 0 0 1 1 1 0 CXC domain HypA PF01155.19 NODE_85713_length_186_cov_36.980132_g77772_i0forward_frame_1 - 0.046 13.7 0.2 0.056 13.5 0.2 1.0 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF4215 PF13948.6 NODE_85712_length_186_cov_38.000000_g77771_i0reverse_frame_1 - 0.00053 20.4 5.7 0.056 13.9 0.7 2.3 2 1 0 2 2 2 2 Domain of unknown function (DUF4215) DUF3681 PF12442.8 NODE_85712_length_186_cov_38.000000_g77771_i0forward_frame_1 - 0.072 13.6 0.0 0.076 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3681) HopA1 PF17914.1 NODE_85698_length_186_cov_48.278146_g77757_i0forward_frame_1 - 0.081 12.7 0.1 0.084 12.6 0.1 1.1 1 0 0 1 1 1 0 HopA1 effector protein family Fun_ATP-synt_8 PF05933.13 NODE_85697_length_186_cov_48.450331_g77756_i0reverse_frame_1 - 0.0062 16.7 1.3 0.0085 16.2 1.3 1.3 1 0 0 1 1 1 1 Fungal ATP synthase protein 8 (A6L) zf-C4pol PF14260.6 NODE_85694_length_186_cov_51.311258_g77753_i0reverse_frame_1 - 0.0058 17.1 0.2 0.0072 16.8 0.2 1.1 1 0 0 1 1 1 1 C4-type zinc-finger of DNA polymerase delta PA26 PF04636.13 NODE_85694_length_186_cov_51.311258_g77753_i0reverse_frame_1 - 0.038 12.9 0.1 0.039 12.9 0.1 1.0 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) IMUP PF15761.5 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_1 - 4.9 7.9 14.7 5.8 7.7 14.7 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein SUV3_C PF12513.8 NODE_85692_length_186_cov_55.238411_g77751_i0reverse_frame_1 - 0.13 12.3 0.3 0.66 9.9 0.0 1.9 2 0 0 2 2 2 0 Mitochondrial degradasome RNA helicase subunit C terminal MerE PF05052.12 NODE_85691_length_186_cov_55.622517_g77750_i0forward_frame_1 - 0.068 13.1 4.0 0.081 12.9 4.0 1.2 1 0 0 1 1 1 0 MerE protein CbiN PF02553.15 NODE_85690_length_186_cov_56.364238_g77749_i0forward_frame_1 - 0.22 11.5 0.0 0.25 11.4 0.0 1.1 1 0 0 1 1 1 0 Cobalt transport protein component CbiN Dpy-30 PF05186.13 NODE_85686_length_186_cov_66.642384_g77745_i0forward_frame_1 - 0.011 15.5 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 Dpy-30 motif DUF5586 PF17824.1 NODE_85686_length_186_cov_66.642384_g77745_i0forward_frame_1 - 0.062 12.4 0.1 0.065 12.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5586) Rubredoxin_C PF18267.1 NODE_85680_length_186_cov_71.715232_g77739_i0forward_frame_1 - 0.086 12.8 0.2 0.34 10.8 0.2 1.7 2 0 0 2 2 2 0 Rubredoxin NAD+ reductase C-terminal domain CaM-KIIN PF15170.6 NODE_85678_length_186_cov_73.119205_g77737_i0reverse_frame_1 - 0.14 12.3 0.2 0.17 12.0 0.2 1.2 1 0 0 1 1 1 0 Calcium/calmodulin-dependent protein kinase II inhibitor Fer4_6 PF12837.7 NODE_85677_length_186_cov_73.463576_g77736_i0forward_frame_1 - 0.0065 16.5 2.4 0.0099 15.9 2.4 1.3 1 0 0 1 1 1 1 4Fe-4S binding domain LPD30 PF18850.1 NODE_85673_length_186_cov_79.092715_g77732_i0reverse_frame_1 - 0.052 13.3 0.2 0.054 13.2 0.2 1.0 1 0 0 1 1 1 0 Large polyvalent protein associated domain 30 TPR_12 PF13424.6 NODE_85665_length_186_cov_100.410596_g77724_i0reverse_frame_1 - 0.13 12.5 0.0 0.16 12.3 0.0 1.0 1 0 0 1 1 1 0 Tetratricopeptide repeat SR-25 PF10500.9 NODE_85653_length_186_cov_4498.622517_g77712_i0forward_frame_1 - 0.23 11.1 8.4 0.22 11.1 8.4 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HHV-5_US34A PF17087.5 NODE_85652_length_186_cov_7747.006623_g77711_i0forward_frame_1 - 0.023 14.8 0.0 0.032 14.4 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus US34A protein family RB_A PF01858.17 NODE_85647_length_187_cov_0.789474_g77706_i0reverse_frame_3 - 0.28 11.0 1.6 0.29 10.9 1.6 1.0 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain Atrophin-1 PF03154.15 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.03 12.6 8.1 0.031 12.6 8.1 1.0 1 0 0 1 1 1 0 Atrophin-1 family DRMBL PF07522.14 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.15 12.2 0.7 0.2 11.8 0.7 1.1 1 0 0 1 1 1 0 DNA repair metallo-beta-lactamase DUF3915 PF13054.6 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.15 12.0 6.8 0.19 11.8 6.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) FAM27 PF15832.5 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.17 12.5 6.0 0.23 12.0 6.0 1.2 1 0 0 1 1 1 0 FAM27 D and E protein family DUF3824 PF12868.7 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_3 - 0.44 11.2 5.2 0.47 11.1 5.2 1.1 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) DUF3915 PF13054.6 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_2 - 0.045 13.7 3.3 0.048 13.7 3.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_85645_length_187_cov_0.802632_g77704_i0forward_frame_2 - 1.5 7.0 10.4 1.9 6.7 10.4 1.1 1 0 0 1 1 1 0 Atrophin-1 family CYTL1 PF15153.6 NODE_85644_length_187_cov_0.888158_g77703_i0reverse_frame_3 - 0.094 12.7 0.0 0.094 12.7 0.0 1.1 1 0 0 1 1 1 0 Cytokine-like protein 1 LPD22 PF18834.1 NODE_85644_length_187_cov_0.888158_g77703_i0forward_frame_3 - 0.31 11.3 2.7 0.76 10.0 0.1 2.0 1 1 1 2 2 2 0 Large polyvalent protein associated domain 22 Comm PF15957.5 NODE_85643_length_187_cov_0.894737_g77702_i0forward_frame_2 - 0.15 12.4 1.5 0.15 12.4 1.5 1.1 1 0 0 1 1 1 0 Commissureless Ax_dynein_light PF10211.9 NODE_85642_length_187_cov_0.894737_g77701_i0forward_frame_2 - 4.8 7.1 13.3 5.4 6.9 13.3 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain DUF5450 PF17529.2 NODE_85635_length_187_cov_0.947368_g77694_i0reverse_frame_3 - 0.098 12.8 0.3 0.11 12.6 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5450) LOB PF03195.14 NODE_85635_length_187_cov_0.947368_g77694_i0forward_frame_3 - 0.07 13.7 1.6 0.094 13.3 1.4 1.5 1 1 1 2 2 2 0 Lateral organ boundaries (LOB) domain SRP_SPB PF02978.19 NODE_85634_length_187_cov_0.947368_g77693_i0reverse_frame_3 - 0.032 14.8 0.0 0.035 14.7 0.0 1.1 1 0 0 1 1 1 0 Signal peptide binding domain zf-Sec23_Sec24 PF04810.15 NODE_85634_length_187_cov_0.947368_g77693_i0forward_frame_2 - 0.07 13.2 1.1 0.091 12.8 1.1 1.3 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger YozD PF14162.6 NODE_85634_length_187_cov_0.947368_g77693_i0forward_frame_2 - 0.18 12.1 0.0 0.26 11.6 0.0 1.2 1 0 0 1 1 1 0 YozD-like protein Thyroglobulin_1 PF00086.18 NODE_85632_length_187_cov_0.960526_g77691_i0reverse_frame_3 - 0.019 14.6 1.0 0.024 14.3 1.0 1.2 1 0 0 1 1 1 0 Thyroglobulin type-1 repeat Lamprin PF06403.11 NODE_85628_length_187_cov_0.973684_g77687_i0forward_frame_2 - 0.13 12.2 11.8 0.35 10.8 4.8 2.0 1 1 1 2 2 2 0 Lamprin Kelch_4 PF13418.6 NODE_85628_length_187_cov_0.973684_g77687_i0forward_frame_2 - 0.17 11.9 1.1 0.24 11.5 1.1 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain Lem_TRP PF08262.11 NODE_85628_length_187_cov_0.973684_g77687_i0forward_frame_2 - 0.29 11.2 1.0 0.29 11.2 1.0 3.3 4 0 0 4 4 4 0 Leucophaea maderae tachykinin-related peptide Parvo_NS1 PF01057.17 NODE_85627_length_187_cov_0.986842_g77686_i0reverse_frame_3 - 0.054 12.6 0.5 0.064 12.3 0.5 1.0 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF454 PF04304.13 NODE_85618_length_187_cov_1.032895_g77677_i0reverse_frame_3 - 0.11 12.5 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF454) eIF_4EBP PF05456.11 NODE_85617_length_187_cov_1.032895_g77676_i0forward_frame_2 - 0.095 12.6 0.8 0.11 12.5 0.8 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) FAM176 PF14851.6 NODE_85611_length_187_cov_1.039474_g77670_i0reverse_frame_3 - 0.19 11.4 0.6 0.23 11.1 0.6 1.1 1 0 0 1 1 1 0 FAM176 family PAX PF00292.18 NODE_85610_length_187_cov_1.039474_g77669_i0forward_frame_3 - 0.024 14.5 0.1 0.026 14.5 0.1 1.0 1 0 0 1 1 1 0 'Paired box' domain Cys_box PF17869.1 NODE_85607_length_187_cov_1.046053_g77666_i0reverse_frame_2 - 0.24 11.6 7.9 0.27 11.4 7.8 1.3 1 1 0 1 1 1 0 Anosmin cysteine rich domain DUF1490 PF07371.12 NODE_85604_length_187_cov_1.046053_g77663_i0reverse_frame_3 - 0.044 13.9 0.1 0.054 13.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) SRTM1 PF15872.5 NODE_85602_length_187_cov_1.046053_g77661_i0reverse_frame_3 - 0.034 14.3 0.9 0.036 14.2 0.9 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 PTP_N PF12453.8 NODE_85599_length_187_cov_1.046053_g77658_i0forward_frame_3 - 3.5 7.4 5.7 1.8 8.4 1.6 2.2 2 0 0 2 2 2 0 Protein tyrosine phosphatase N terminal Pkinase PF00069.25 NODE_85598_length_187_cov_1.046053_g77657_i0reverse_frame_3 - 8.1e-14 51.6 0.1 8.5e-14 51.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_85598_length_187_cov_1.046053_g77657_i0reverse_frame_3 - 2.9e-05 23.5 0.1 3e-05 23.4 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Adipogenin PF15202.6 NODE_85597_length_187_cov_1.046053_g77656_i0forward_frame_2 - 2.4 8.3 7.0 3 8.0 7.0 1.3 1 0 0 1 1 1 0 Adipogenin PP2C PF00481.21 NODE_85593_length_187_cov_1.046053_g77652_i0reverse_frame_2 - 5.4e-06 26.2 0.0 5.6e-06 26.2 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Kelch_3 PF13415.6 NODE_85592_length_187_cov_1.046053_g77651_i0forward_frame_3 - 0.042 14.2 0.2 0.057 13.7 0.2 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain CysG_dimeriser PF10414.9 NODE_85591_length_187_cov_1.046053_g77650_i0forward_frame_2 - 0.045 13.5 3.1 0.051 13.3 3.1 1.1 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region RNase_H PF00075.24 NODE_85588_length_187_cov_1.046053_g77647_i0forward_frame_3 - 7.4e-05 23.0 0.0 8.5e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 RNase H Toprim_C_rpt PF13368.6 NODE_85582_length_187_cov_1.052632_g77641_i0forward_frame_3 - 0.013 15.5 0.0 0.016 15.2 0.0 1.1 1 0 0 1 1 1 0 Topoisomerase C-terminal repeat ArsC PF03960.15 NODE_85582_length_187_cov_1.052632_g77641_i0forward_frame_3 - 0.015 15.3 0.3 0.018 15.1 0.3 1.1 1 0 0 1 1 1 0 ArsC family zf-RING_2 PF13639.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 9.4e-15 54.7 9.1 1.2e-14 54.3 9.1 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 3.7e-09 36.2 5.6 3.7e-09 36.2 5.6 1.5 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 7.4e-09 35.5 2.8 2.1e-08 34.1 3.1 1.5 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1e-08 35.0 6.7 1.3e-08 34.6 6.7 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1.5e-08 34.4 8.4 2e-08 33.9 8.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 3.1e-08 33.3 7.5 4.6e-08 32.8 7.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 3.7e-08 33.5 7.3 6.3e-08 32.8 7.3 1.4 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 7.6e-07 29.1 3.0 8.5e-07 28.9 3.0 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1.2e-05 25.1 6.8 1.7e-05 24.6 6.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1.5e-05 24.8 5.7 2.2e-05 24.2 5.7 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 9.5e-05 21.9 6.9 0.00017 21.1 6.9 1.5 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.0055 16.8 7.2 0.013 15.6 7.2 1.7 1 1 0 1 1 1 1 RING-variant domain Prok-RING_1 PF14446.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.0073 16.2 8.5 0.017 15.0 3.8 2.1 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-Nse PF11789.8 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.0094 15.7 4.0 0.012 15.4 4.0 1.2 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Rtf2 PF04641.12 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.027 13.8 4.5 0.15 11.4 4.5 1.8 1 1 0 1 1 1 0 Rtf2 RING-finger zf-RING-like PF08746.11 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.037 14.3 6.7 0.069 13.5 6.7 1.6 1 1 0 1 1 1 0 RING-like domain zf-C3HC4_4 PF15227.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.051 13.7 9.2 0.31 11.2 9.2 2.1 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Vps39_2 PF10367.9 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.15 12.5 7.3 0.14 12.7 3.2 2.0 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 2 zf-RING_4 PF14570.6 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.32 10.8 6.9 0.62 9.9 6.9 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zf_RING PF16744.5 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.35 11.0 6.5 0.54 10.4 6.5 1.4 1 1 0 1 1 1 0 KIAA1045 RING finger FANCL_C PF11793.8 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 0.38 10.9 8.8 4.4 7.6 8.8 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain PHD PF00628.29 NODE_85580_length_187_cov_1.052632_g77639_i0reverse_frame_3 - 1.2 9.1 10.0 2.2 8.3 8.7 1.9 1 1 1 2 2 2 0 PHD-finger zf-C5HC2 PF02928.16 NODE_85570_length_187_cov_1.052632_g77629_i0forward_frame_2 - 0.4 11.1 4.0 6.1 7.3 1.1 2.1 1 1 1 2 2 2 0 C5HC2 zinc finger 5-FTHF_cyc-lig PF01812.20 NODE_85569_length_187_cov_1.052632_g77628_i0reverse_frame_3 - 0.051 13.4 0.1 0.054 13.3 0.1 1.0 1 0 0 1 1 1 0 5-formyltetrahydrofolate cyclo-ligase family Omega-toxin PF06357.11 NODE_85566_length_187_cov_1.052632_g77625_i0forward_frame_3 - 0.058 13.2 0.1 0.084 12.7 0.1 1.3 1 0 0 1 1 1 0 Omega-atracotoxin HicA_toxin PF07927.12 NODE_85561_length_187_cov_1.052632_g77620_i0forward_frame_2 - 0.091 12.8 0.2 0.12 12.4 0.2 1.1 1 0 0 1 1 1 0 HicA toxin of bacterial toxin-antitoxin, PHM7_cyt PF14703.6 NODE_85550_length_187_cov_1.052632_g77609_i0reverse_frame_3 - 0.034 14.4 0.1 0.034 14.4 0.1 1.0 1 0 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter DUF2953 PF11167.8 NODE_85546_length_187_cov_1.052632_g77605_i0forward_frame_3 - 0.16 12.0 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2953) TPR_12 PF13424.6 NODE_85545_length_187_cov_1.052632_g77604_i0forward_frame_3 - 0.017 15.4 0.0 0.024 14.9 0.0 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat DUF4818 PF16089.5 NODE_85538_length_187_cov_1.052632_g77597_i0reverse_frame_2 - 0.011 16.1 0.2 0.012 16.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) RL PF17797.1 NODE_85536_length_187_cov_1.052632_g77595_i0reverse_frame_3 - 0.0022 17.9 0.8 0.0026 17.7 0.8 1.2 1 0 0 1 1 1 1 RL domain DUF1290 PF06947.12 NODE_85536_length_187_cov_1.052632_g77595_i0forward_frame_3 - 0.056 13.5 0.2 0.07 13.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1290) DUF3039 PF11238.8 NODE_85532_length_187_cov_1.052632_g77591_i0forward_frame_2 - 0.034 13.9 0.8 0.041 13.6 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3039) DUF5594 PF18057.1 NODE_85528_length_187_cov_1.052632_g77587_i0forward_frame_3 - 0.1 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5594) MRF_C1 PF13887.6 NODE_85527_length_187_cov_1.052632_g77586_i0forward_frame_2 - 0.08 12.1 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 Myelin gene regulatory factor -C-terminal domain 1 Cript PF10235.9 NODE_85523_length_187_cov_1.052632_g77582_i0forward_frame_2 - 0.0077 16.8 0.2 0.0082 16.7 0.2 1.1 1 0 0 1 1 1 1 Microtubule-associated protein CRIPT CEBP_ZZ PF16366.5 NODE_85523_length_187_cov_1.052632_g77582_i0forward_frame_2 - 0.051 13.8 0.5 0.058 13.6 0.5 1.1 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain HscB_4_cys PF18256.1 NODE_85522_length_187_cov_1.052632_g77581_i0reverse_frame_2 - 0.029 14.2 4.8 0.042 13.7 4.8 1.4 1 1 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif PDE6_gamma PF04868.12 NODE_85520_length_187_cov_1.065789_g77579_i0reverse_frame_2 - 0.01 16.0 2.4 0.012 15.9 2.4 1.2 1 0 0 1 1 1 0 Retinal cGMP phosphodiesterase, gamma subunit OAF PF14941.6 NODE_85519_length_187_cov_1.072368_g77578_i0forward_frame_2 - 0.0058 16.1 4.6 0.0061 16.0 4.6 1.0 1 0 0 1 1 1 1 Transcriptional regulator, Out at first ADD_DNMT3 PF17980.1 NODE_85519_length_187_cov_1.072368_g77578_i0forward_frame_2 - 0.047 13.7 2.9 0.068 13.2 2.9 1.2 1 0 0 1 1 1 0 Cysteine rich ADD domain in DNMT3 DUF2950 PF11453.8 NODE_85518_length_187_cov_1.085526_g77577_i0reverse_frame_3 - 0.1 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2950) DUF2607 PF10795.9 NODE_85518_length_187_cov_1.085526_g77577_i0forward_frame_3 - 0.085 13.0 1.0 0.1 12.8 1.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2607) Sec62 PF03839.16 NODE_85515_length_187_cov_1.098684_g77574_i0reverse_frame_2 - 0.054 13.0 0.1 0.054 13.0 0.1 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Glycos_transf_2 PF00535.26 NODE_85514_length_187_cov_1.111842_g77573_i0reverse_frame_2 - 0.00042 20.2 0.0 0.00042 20.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 NODE_85514_length_187_cov_1.111842_g77573_i0reverse_frame_2 - 0.05 13.5 0.0 0.05 13.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF4232 PF14016.6 NODE_85513_length_187_cov_1.111842_g77572_i0reverse_frame_3 - 0.049 13.8 0.0 0.054 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4232) Glyco_transf_5 PF08323.11 NODE_85513_length_187_cov_1.111842_g77572_i0forward_frame_2 - 0.15 11.7 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Starch synthase catalytic domain Deltaretro_Tax PF05599.11 NODE_85509_length_187_cov_1.125000_g77568_i0forward_frame_3 - 0.015 15.8 0.5 0.016 15.7 0.5 1.2 1 0 0 1 1 1 0 Deltaretrovirus Tax protein Macin PF14865.6 NODE_85499_length_187_cov_1.151316_g77558_i0forward_frame_2 - 0.0044 17.5 0.1 0.0044 17.5 0.1 1.7 1 1 1 2 2 2 1 Macin DNA_gyraseA_C PF03989.13 NODE_85498_length_187_cov_1.151316_g77557_i0reverse_frame_2 - 0.081 12.4 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 DNA gyrase C-terminal domain, beta-propeller TEP1_N PF05386.11 NODE_85492_length_187_cov_1.177632_g77551_i0reverse_frame_2 - 0.068 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 TEP1 N-terminal domain Ribosomal_S27e PF01667.17 NODE_85492_length_187_cov_1.177632_g77551_i0forward_frame_3 - 0.14 11.9 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S27 Ribosomal_S14 PF00253.21 NODE_85490_length_187_cov_1.184211_g77549_i0reverse_frame_2 - 0.037 13.8 0.1 0.047 13.5 0.1 1.3 1 1 0 1 1 1 0 Ribosomal protein S14p/S29e Get5_bdg PF16843.5 NODE_85486_length_187_cov_1.197368_g77545_i0reverse_frame_3 - 0.18 11.4 1.3 0.34 10.4 1.3 1.5 1 1 0 1 1 1 0 Binding domain to Get4 on Get5, Golgi to ER traffic protein CENP-K PF11802.8 NODE_85486_length_187_cov_1.197368_g77545_i0forward_frame_3 - 0.029 14.0 0.1 0.033 13.7 0.1 1.0 1 0 0 1 1 1 0 Centromere-associated protein K zf-UBR PF02207.20 NODE_85483_length_187_cov_1.223684_g77542_i0forward_frame_3 - 0.026 14.7 1.9 0.028 14.6 1.9 1.2 1 0 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks440.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks440.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks440.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks440.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TMEM156 PF15106.6 NODE_85481_length_187_cov_1.223684_g77540_i0forward_frame_3 - 0.061 12.8 1.5 0.059 12.8 1.5 1.1 1 0 0 1 1 1 0 TMEM156 protein family Peptidase_C74 PF12387.8 NODE_85467_length_187_cov_1.296053_g77526_i0reverse_frame_3 - 0.051 13.1 1.5 0.055 12.9 1.5 1.1 1 0 0 1 1 1 0 Pestivirus NS2 peptidase Ost5 PF05251.12 NODE_85462_length_187_cov_1.302632_g77521_i0reverse_frame_3 - 0.027 14.8 3.6 0.045 14.0 3.5 1.6 1 1 0 1 1 1 0 Oligosaccharyltransferase subunit 5 NAD1 PF18778.1 NODE_85462_length_187_cov_1.302632_g77521_i0forward_frame_2 - 0.0075 16.4 0.5 0.008 16.3 0.5 1.0 1 0 0 1 1 1 1 Novel AID APOBEC clade 1 APOBEC_N PF08210.11 NODE_85462_length_187_cov_1.302632_g77521_i0forward_frame_2 - 0.018 14.9 0.4 0.019 14.8 0.4 1.0 1 0 0 1 1 1 0 APOBEC-like N-terminal domain Anoctamin PF04547.12 NODE_85455_length_187_cov_1.315789_g77514_i0reverse_frame_2 - 2.2e-05 23.5 0.7 2.3e-05 23.4 0.7 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel zf-CDGSH PF09360.10 NODE_85454_length_187_cov_1.315789_g77513_i0forward_frame_2 - 0.17 12.2 0.7 0.17 12.2 0.7 1.8 1 1 1 2 2 2 0 Iron-binding zinc finger CDGSH type DUF3909 PF13077.6 NODE_85450_length_187_cov_1.315789_g77509_i0reverse_frame_2 - 0.026 14.7 0.0 0.028 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3909) zf-C2H2_8 PF15909.5 NODE_85450_length_187_cov_1.315789_g77509_i0forward_frame_3 - 0.62 10.4 6.1 0.76 10.1 6.1 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon EpsG PF14897.6 NODE_85449_length_187_cov_1.315789_g77508_i0reverse_frame_3 - 0.01 15.2 0.5 0.01 15.2 0.5 1.0 1 0 0 1 1 1 0 EpsG family DHHC PF01529.20 NODE_85446_length_187_cov_1.315789_g77505_i0reverse_frame_2 - 0.21 11.7 5.5 0.23 11.6 5.5 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF4510 PF14971.6 NODE_85442_length_187_cov_1.348684_g77501_i0forward_frame_2 - 0.03 14.7 0.0 0.032 14.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4510) DUF4158 PF13700.6 NODE_85441_length_187_cov_1.355263_g77500_i0forward_frame_3 - 4.9e-12 46.0 0.0 5.2e-12 45.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4158) Exo_endo_phos PF03372.23 NODE_85437_length_187_cov_1.375000_g77496_i0reverse_frame_3 - 0.014 14.9 0.1 0.02 14.4 0.1 1.3 1 0 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family DUF3836 PF12930.7 NODE_85431_length_187_cov_1.407895_g77490_i0forward_frame_3 - 0.0022 17.7 2.3 0.0026 17.5 2.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF3836) CXCXC PF03128.14 NODE_85426_length_187_cov_1.421053_g77485_i0reverse_frame_2 - 0.091 13.2 7.2 1.3 9.6 0.7 2.6 2 0 0 2 2 2 0 CXCXC repeat SMP_2 PF10144.9 NODE_85418_length_187_cov_1.440789_g77477_i0forward_frame_3 - 0.087 12.5 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial virulence factor haemolysin FAM35_C PF15793.5 NODE_85417_length_187_cov_1.447368_g77476_i0reverse_frame_3 - 0.019 14.4 0.2 0.021 14.2 0.2 1.0 1 0 0 1 1 1 0 Protein family FAM35, C-terminal DUF4074 PF13293.6 NODE_85416_length_187_cov_1.453947_g77475_i0forward_frame_2 - 0.087 13.1 0.5 0.32 11.3 0.5 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4074) F-box PF00646.33 NODE_85412_length_187_cov_1.467105_g77471_i0reverse_frame_2 - 4.8 7.2 6.4 0.99 9.4 2.5 1.9 1 1 1 2 2 2 0 F-box domain DUF2218 PF09981.9 NODE_85412_length_187_cov_1.467105_g77471_i0forward_frame_2 - 0.0058 17.0 0.0 0.0061 16.9 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2218) DUF2767 PF10965.8 NODE_85406_length_187_cov_1.486842_g77465_i0forward_frame_3 - 0.18 11.8 0.1 0.25 11.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2767) ChW PF07538.11 NODE_85406_length_187_cov_1.486842_g77465_i0forward_frame_2 - 0.16 11.9 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Clostridial hydrophobic W Toxin_37 PF11415.8 NODE_85390_length_187_cov_1.559211_g77449_i0reverse_frame_2 - 0.34 10.8 2.9 23 4.9 0.0 3.1 3 0 0 3 3 3 0 Antifungal peptide termicin SPC12 PF06645.13 NODE_85390_length_187_cov_1.559211_g77449_i0forward_frame_3 - 0.16 12.0 0.3 0.36 10.9 0.0 1.6 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Adeno_E1B_55K_N PF04623.12 NODE_85389_length_187_cov_1.559211_g77448_i0reverse_frame_2 - 0.039 14.6 0.1 0.046 14.4 0.1 1.1 1 0 0 1 1 1 0 Adenovirus E1B protein N-terminus INO80_Ies4 PF08193.11 NODE_85387_length_187_cov_1.565789_g77446_i0reverse_frame_2 - 0.035 14.1 0.4 0.04 13.9 0.4 1.1 1 0 0 1 1 1 0 INO80 complex subunit Ies4 VSP PF03302.13 NODE_85380_length_187_cov_1.572368_g77439_i0reverse_frame_3 - 0.00059 18.8 6.8 0.00075 18.5 6.8 1.3 1 0 0 1 1 1 1 Giardia variant-specific surface protein Ly-6_related PF06579.12 NODE_85377_length_187_cov_1.572368_g77436_i0reverse_frame_3 - 0.16 12.2 0.2 0.19 12.0 0.2 1.1 1 0 0 1 1 1 0 Caenorhabditis elegans ly-6-related protein Peptidase_S48 PF03574.15 NODE_85369_length_187_cov_1.578947_g77428_i0forward_frame_2 - 0.035 14.3 0.1 0.037 14.2 0.1 1.1 1 0 0 1 1 1 0 Peptidase family S48 dbPDZ_assoc PF16610.5 NODE_85358_length_187_cov_1.578947_g77417_i0reverse_frame_3 - 0.029 14.6 1.1 0.029 14.6 1.1 1.6 2 0 0 2 2 2 0 Unstructured region between two PDZ domains on Dlg5 Yip1 PF04893.17 NODE_85358_length_187_cov_1.578947_g77417_i0forward_frame_3 - 0.24 11.1 6.7 0.27 10.9 6.7 1.1 1 0 0 1 1 1 0 Yip1 domain NPM1-C PF16276.5 NODE_85355_length_187_cov_1.578947_g77414_i0reverse_frame_2 - 0.07 13.1 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Nucleophosmin C-terminal domain CCDC53 PF10152.9 NODE_85355_length_187_cov_1.578947_g77414_i0reverse_frame_2 - 0.19 12.2 0.1 0.25 11.7 0.1 1.2 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex zinc_ribbon_9 PF14369.6 NODE_85355_length_187_cov_1.578947_g77414_i0forward_frame_3 - 0.079 13.2 2.2 0.11 12.8 2.2 1.2 1 0 0 1 1 1 0 zinc-ribbon Porph_ging PF09697.10 NODE_85351_length_187_cov_1.605263_g77410_i0reverse_frame_2 - 0.072 13.6 0.8 0.08 13.5 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (Porph_ging) PlyB_C PF18684.1 NODE_85342_length_187_cov_1.664474_g77401_i0reverse_frame_3 - 0.046 13.4 0.0 0.046 13.4 0.0 1.2 1 0 0 1 1 1 0 Pleurotolysin B C-terminal domain Dynein_AAA_lid PF17852.1 NODE_85342_length_187_cov_1.664474_g77401_i0forward_frame_2 - 0.067 13.3 0.0 0.078 13.1 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain SapA PF02199.15 NODE_85341_length_187_cov_1.677632_g77400_i0forward_frame_2 - 0.12 12.6 2.5 0.89 9.9 0.2 2.3 2 0 0 2 2 2 0 Saposin A-type domain PAS_9 PF13426.7 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.00029 21.1 0.0 0.00029 21.1 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS_8 PF13188.7 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.00033 20.6 0.0 0.00034 20.5 0.0 1.1 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.0041 17.1 0.0 0.0047 16.9 0.0 1.2 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.10 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.0058 16.9 0.0 0.0058 16.9 0.0 1.1 1 0 0 1 1 1 1 PAS fold PAS_7 PF12860.7 NODE_85338_length_187_cov_1.684211_g77397_i0reverse_frame_2 - 0.073 13.2 0.0 0.077 13.2 0.0 1.2 1 0 0 1 1 1 0 PAS fold Ogr_Delta PF04606.12 NODE_85334_length_187_cov_1.710526_g77393_i0reverse_frame_3 - 0.12 12.3 1.0 3.7 7.6 0.2 2.1 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger ThiD2 PF17792.1 NODE_85330_length_187_cov_1.730263_g77389_i0forward_frame_3 - 0.15 12.5 2.5 0.15 12.5 2.5 1.1 1 0 0 1 1 1 0 ThiD2 family Siva PF05458.12 NODE_85330_length_187_cov_1.730263_g77389_i0forward_frame_2 - 0.04 13.6 0.5 0.044 13.5 0.5 1.0 1 0 0 1 1 1 0 Cd27 binding protein (Siva) GASA PF02704.14 NODE_85328_length_187_cov_1.736842_g77387_i0forward_frame_2 - 0.019 15.1 1.2 0.023 14.9 1.2 1.1 1 0 0 1 1 1 0 Gibberellin regulated protein DUF5465 PF17553.2 NODE_85327_length_187_cov_1.743421_g77386_i0forward_frame_2 - 0.014 15.8 0.2 1.1 9.9 0.1 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5465) POP1 PF06978.11 NODE_85326_length_187_cov_1.750000_g77385_i0forward_frame_3 - 1.5e-17 64.3 3.6 1.5e-17 64.3 3.6 1.0 1 0 0 1 1 1 1 Ribonucleases P/MRP protein subunit POP1 zf-UBR PF02207.20 NODE_85324_length_187_cov_1.750000_g77383_i0reverse_frame_3 - 0.012 15.7 0.6 0.014 15.6 0.6 1.1 1 0 0 1 1 1 0 Putative zinc finger in N-recognin (UBR box) Cg6151-P PF10233.9 NODE_85323_length_187_cov_1.750000_g77382_i0forward_frame_2 - 0.062 13.6 1.7 0.074 13.4 1.7 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein CG6151-P Ribosomal_L34 PF00468.17 NODE_85313_length_187_cov_1.782895_g77372_i0forward_frame_3 - 3.2e-06 27.0 1.6 4.2e-06 26.6 1.6 1.2 1 0 0 1 1 1 1 Ribosomal protein L34 DUF1617 PF07761.12 NODE_85313_length_187_cov_1.782895_g77372_i0forward_frame_3 - 0.019 15.1 0.1 0.019 15.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1617) Helitron_like_N PF14214.6 NODE_85311_length_187_cov_1.802632_g77370_i0reverse_frame_3 - 0.0062 16.8 0.0 0.0062 16.8 0.0 1.0 1 0 0 1 1 1 1 Helitron helicase-like domain at N-terminus ATPgrasp_N PF18130.1 NODE_85311_length_187_cov_1.802632_g77370_i0reverse_frame_3 - 0.044 14.3 0.0 0.066 13.8 0.0 1.4 1 1 0 1 1 1 0 ATP-grasp N-terminal domain DUF4096 PF13340.6 NODE_85311_length_187_cov_1.802632_g77370_i0forward_frame_2 - 0.014 15.6 0.9 0.024 14.9 0.9 1.4 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) zf-C3H1 PF10650.9 NODE_85310_length_187_cov_1.809211_g77369_i0forward_frame_3 - 9.3 6.1 10.2 0.3 10.9 1.7 2.5 3 0 0 3 3 3 0 Putative zinc-finger domain Nucleocap_ssRNA PF11128.8 NODE_85309_length_187_cov_1.815789_g77368_i0reverse_frame_2 - 0.051 13.3 0.0 0.056 13.2 0.0 1.0 1 0 0 1 1 1 0 Plant viral coat protein nucleocapsid Herpes_capsid PF06112.11 NODE_85308_length_187_cov_1.822368_g77367_i0reverse_frame_3 - 0.17 11.9 0.3 0.17 11.9 0.3 1.0 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein CAAD PF14159.6 NODE_85308_length_187_cov_1.822368_g77367_i0forward_frame_3 - 0.051 13.4 2.3 0.061 13.2 2.3 1.1 1 0 0 1 1 1 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Glt_symporter PF03616.14 NODE_85304_length_187_cov_1.835526_g77363_i0forward_frame_3 - 0.13 10.9 0.3 0.15 10.7 0.3 1.1 1 0 0 1 1 1 0 Sodium/glutamate symporter GBP_PSP PF02425.15 NODE_85301_length_187_cov_1.842105_g77360_i0forward_frame_3 - 0.15 11.8 0.4 0.15 11.8 0.4 1.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide RCC1_2 PF13540.6 NODE_85296_length_187_cov_1.842105_g77355_i0reverse_frame_3 - 0.043 13.6 3.7 0.14 12.0 3.7 1.8 1 1 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat Pyridoxal_deC PF00282.19 NODE_85293_length_187_cov_1.848684_g77352_i0reverse_frame_3 - 0.00026 19.8 0.1 0.00028 19.7 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain PORR PF11955.8 NODE_85293_length_187_cov_1.848684_g77352_i0reverse_frame_3 - 0.062 12.2 0.1 0.062 12.2 0.1 1.0 1 0 0 1 1 1 0 Plant organelle RNA recognition domain PsbH PF00737.20 NODE_85292_length_187_cov_1.848684_g77351_i0forward_frame_2 - 8.9 6.1 8.2 1.5 8.6 4.2 1.7 1 1 1 2 2 2 0 Photosystem II 10 kDa phosphoprotein RcpB PF16971.5 NODE_85291_length_187_cov_1.848684_g77350_i0reverse_frame_2 - 0.0068 16.3 0.6 0.007 16.3 0.6 1.0 1 0 0 1 1 1 1 Rough colony protein B, tight adherence - tad - subunit DUF5408 PF17402.2 NODE_85289_length_187_cov_1.868421_g77348_i0forward_frame_3 - 0.054 13.4 1.1 0.083 12.8 1.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5408) DUF4261 PF14080.6 NODE_85289_length_187_cov_1.868421_g77348_i0forward_frame_2 - 0.12 12.5 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4261) HSA PF07529.13 NODE_85287_length_187_cov_1.901316_g77346_i0reverse_frame_3 - 0.13 12.6 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 HSA Elf1 PF05129.13 NODE_85282_length_187_cov_1.940789_g77341_i0reverse_frame_3 - 0.87 9.7 6.4 1.1 9.3 1.7 2.1 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like Zn_clus PF00172.18 NODE_85279_length_187_cov_2.013158_g77338_i0reverse_frame_3 - 0.011 15.9 0.4 0.015 15.4 0.4 1.2 1 0 0 1 1 1 0 Fungal Zn(2)-Cys(6) binuclear cluster domain IMUP PF15761.5 NODE_85279_length_187_cov_2.013158_g77338_i0forward_frame_2 - 0.041 14.6 0.4 0.041 14.6 0.4 1.0 1 0 0 1 1 1 0 Immortalisation up-regulated protein eIF3_p135 PF12807.7 NODE_85273_length_187_cov_2.078947_g77332_i0forward_frame_3 - 0.15 12.1 0.0 0.16 12.0 0.0 1.0 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit 135 DUF4306 PF14154.6 NODE_85272_length_187_cov_2.085526_g77331_i0reverse_frame_3 - 0.15 12.2 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4306) CSS-motif PF12792.7 NODE_85271_length_187_cov_2.092105_g77330_i0reverse_frame_2 - 0.0066 16.0 0.0 0.0066 16.0 0.0 1.0 1 0 0 1 1 1 1 CSS motif domain associated with EAL DUF957 PF06117.11 NODE_85270_length_187_cov_2.092105_g77329_i0reverse_frame_2 - 0.043 13.4 1.1 0.061 12.9 1.1 1.2 1 0 0 1 1 1 0 Enterobacterial protein of unknown function (DUF957) DUF2615 PF11027.8 NODE_85270_length_187_cov_2.092105_g77329_i0forward_frame_2 - 0.35 11.0 0.6 0.37 11.0 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) COX17 PF05051.13 NODE_85269_length_187_cov_2.098684_g77328_i0reverse_frame_3 - 0.038 14.4 2.0 0.045 14.1 2.0 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase copper chaperone (COX17) Ribosomal_L22e PF01776.17 NODE_85263_length_187_cov_2.111842_g77322_i0reverse_frame_3 - 0.068 13.6 0.9 0.087 13.2 0.9 1.2 1 0 0 1 1 1 0 Ribosomal L22e protein family Wap1 PF16997.5 NODE_85263_length_187_cov_2.111842_g77322_i0forward_frame_2 - 0.16 11.1 3.9 0.17 11.0 3.9 1.0 1 0 0 1 1 1 0 Wap1 domain Cupin_4 PF08007.12 NODE_85261_length_187_cov_2.177632_g77320_i0reverse_frame_3 - 1.1e-08 34.9 0.0 1.1e-08 34.9 0.0 1.0 1 0 0 1 1 1 1 Cupin superfamily protein Tup_N PF08581.10 NODE_85261_length_187_cov_2.177632_g77320_i0reverse_frame_3 - 0.012 15.8 0.1 0.015 15.6 0.1 1.1 1 0 0 1 1 1 0 Tup N-terminal PAXNEB PF05625.11 NODE_85261_length_187_cov_2.177632_g77320_i0forward_frame_3 - 0.15 11.2 0.0 0.16 11.1 0.0 1.0 1 0 0 1 1 1 0 PAXNEB protein Glycoprotein_G PF00802.19 NODE_85259_length_187_cov_2.177632_g77318_i0forward_frame_3 - 0.24 10.7 0.5 0.24 10.7 0.5 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Ribosomal_S14 PF00253.21 NODE_85258_length_187_cov_2.190789_g77317_i0forward_frame_2 - 0.046 13.5 1.4 0.072 12.9 1.0 1.5 1 1 0 1 1 1 0 Ribosomal protein S14p/S29e Plus-3 PF03126.18 NODE_85257_length_187_cov_2.243421_g77316_i0reverse_frame_2 - 0.049 14.2 0.2 0.056 14.0 0.2 1.1 1 0 0 1 1 1 0 Plus-3 domain LnmK_N_HDF PF18238.1 NODE_85255_length_187_cov_2.250000_g77314_i0reverse_frame_2 - 0.11 12.2 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 LnmK N-terminal Hot Dog Fold domain Mob1_phocein PF03637.17 NODE_85252_length_187_cov_2.289474_g77311_i0forward_frame_3 - 0.017 15.1 0.3 0.02 14.9 0.3 1.1 1 0 0 1 1 1 0 Mob1/phocein family DUF4376 PF14301.6 NODE_85249_length_187_cov_2.296053_g77308_i0reverse_frame_3 - 0.097 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4376) Rab_bind PF16704.5 NODE_85245_length_187_cov_2.315789_g77304_i0reverse_frame_2 - 0.14 12.2 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 Rab binding domain SOCS_box PF07525.16 NODE_85241_length_187_cov_2.368421_g77300_i0reverse_frame_3 - 0.023 15.0 2.1 0.026 14.9 2.1 1.3 1 1 0 1 1 1 0 SOCS box Utp13 PF08625.11 NODE_85241_length_187_cov_2.368421_g77300_i0reverse_frame_2 - 0.04 13.8 0.1 0.044 13.7 0.1 1.1 1 0 0 1 1 1 0 Utp13 specific WD40 associated domain 4HB PF17947.1 NODE_85240_length_187_cov_2.394737_g77299_i0reverse_frame_3 - 0.12 12.5 0.2 0.14 12.3 0.2 1.1 1 0 0 1 1 1 0 Four helical bundle domain ABC_tran PF00005.27 NODE_85238_length_187_cov_2.506579_g77297_i0forward_frame_3 - 8.2e-09 36.1 0.0 9.5e-09 35.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SbcCD_C PF13558.6 NODE_85238_length_187_cov_2.506579_g77297_i0forward_frame_3 - 0.0045 17.2 0.3 0.036 14.3 0.3 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 NODE_85238_length_187_cov_2.506579_g77297_i0forward_frame_3 - 0.013 15.3 0.0 0.014 15.2 0.0 1.0 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system DCA16 PF15349.6 NODE_85235_length_187_cov_2.546053_g77294_i0reverse_frame_3 - 0.081 12.5 0.9 0.074 12.6 0.9 1.1 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 zf-BED PF02892.15 NODE_85233_length_187_cov_2.578947_g77292_i0reverse_frame_3 - 0.0081 16.2 2.5 0.012 15.6 2.5 1.4 1 1 0 1 1 1 1 BED zinc finger Neur PF00064.18 NODE_85233_length_187_cov_2.578947_g77292_i0reverse_frame_2 - 0.14 10.9 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Neuraminidase ACR_tran PF00873.19 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 9.8e-22 76.5 1.1 1e-21 76.4 1.1 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 0.0035 16.3 0.7 0.0035 16.3 0.7 1.0 1 0 0 1 1 1 1 MMPL family DUF4013 PF13197.6 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 0.014 15.2 1.0 0.015 15.2 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) PAP2_3 PF14378.6 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 0.038 13.7 0.4 0.038 13.7 0.4 1.0 1 0 0 1 1 1 0 PAP2 superfamily Sarcoglycan_2 PF05510.13 NODE_85232_length_187_cov_2.585526_g77291_i0forward_frame_2 - 0.08 11.7 0.1 0.087 11.6 0.1 1.0 1 0 0 1 1 1 0 Sarcoglycan alpha/epsilon MFS_1 PF07690.16 NODE_85227_length_187_cov_2.651316_g77286_i0forward_frame_2 - 0.011 14.7 0.5 0.011 14.7 0.5 1.0 1 0 0 1 1 1 0 Major Facilitator Superfamily tRNA-synt_1 PF00133.22 NODE_85223_length_187_cov_2.763158_g77282_i0reverse_frame_2 - 8.3e-18 64.0 0.2 8.6e-18 63.9 0.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Ldr_toxin PF13940.6 NODE_85223_length_187_cov_2.763158_g77282_i0forward_frame_2 - 0.19 11.8 0.3 0.4 10.8 0.0 1.7 2 0 0 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system UL40 PF10682.9 NODE_85222_length_187_cov_2.776316_g77281_i0reverse_frame_3 - 0.041 13.6 0.1 0.041 13.6 0.1 1.0 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 NIF PF03031.18 NODE_85220_length_187_cov_2.861842_g77279_i0reverse_frame_2 - 3.9e-07 30.0 0.0 4.3e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase zf-C3HC4_3 PF13920.6 NODE_85220_length_187_cov_2.861842_g77279_i0forward_frame_3 - 0.063 13.1 0.8 0.063 13.1 0.8 2.1 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) COX7C PF02935.16 NODE_85215_length_187_cov_3.072368_g77274_i0forward_frame_3 - 0.17 12.1 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc He_PIG PF05345.12 NODE_85212_length_187_cov_3.171053_g77271_i0reverse_frame_3 - 0.00093 19.3 1.2 0.004 17.3 0.9 2.2 2 1 0 2 2 2 1 Putative Ig domain CCSMST1 PF15013.6 NODE_85211_length_187_cov_3.236842_g77270_i0reverse_frame_3 - 0.22 11.7 1.2 0.29 11.3 1.2 1.2 1 0 0 1 1 1 0 CCSMST1 family CBP4 PF07960.11 NODE_85211_length_187_cov_3.236842_g77270_i0forward_frame_2 - 0.078 12.8 0.1 0.078 12.8 0.1 1.1 1 0 0 1 1 1 0 CBP4 MSP1_C PF07462.11 NODE_85210_length_187_cov_3.414474_g77269_i0reverse_frame_2 - 0.0039 16.0 1.3 0.0039 16.0 1.3 1.0 1 0 0 1 1 1 1 Merozoite surface protein 1 (MSP1) C-terminus Med2 PF11214.8 NODE_85210_length_187_cov_3.414474_g77269_i0reverse_frame_2 - 0.039 14.1 0.6 0.049 13.8 0.6 1.3 1 1 0 1 1 1 0 Mediator complex subunit 2 Exo_endo_phos_2 PF14529.6 NODE_85208_length_187_cov_3.532895_g77267_i0forward_frame_2 - 0.0038 17.1 0.0 0.0044 16.9 0.0 1.1 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase Exo_endo_phos PF03372.23 NODE_85208_length_187_cov_3.532895_g77267_i0forward_frame_2 - 0.0087 15.6 0.0 0.0087 15.6 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family AidB_N PF18158.1 NODE_85207_length_187_cov_3.651316_g77266_i0reverse_frame_3 - 0.15 11.9 0.1 0.15 11.9 0.1 1.1 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain OST3_OST6 PF04756.13 NODE_85206_length_187_cov_3.828947_g77265_i0forward_frame_3 - 0.32 10.3 0.7 0.51 9.6 0.7 1.6 1 1 0 1 1 1 0 OST3 / OST6 family, transporter family Microvir_lysis PF04517.12 NODE_85204_length_187_cov_3.875000_g77263_i0reverse_frame_2 - 0.013 15.4 0.9 0.024 14.6 0.9 1.4 1 0 0 1 1 1 0 Microvirus lysis protein (E), C terminus IBN_N PF03810.19 NODE_85204_length_187_cov_3.875000_g77263_i0forward_frame_3 - 8.1e-07 28.9 0.0 1.1e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Importin-beta N-terminal domain HNF-1B_C PF04812.13 NODE_85203_length_187_cov_4.072368_g77262_i0forward_frame_2 - 0.088 12.6 0.2 0.088 12.6 0.2 1.0 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus Ac81 PF05820.11 NODE_85199_length_187_cov_6.703947_g77258_i0forward_frame_3 - 8.6 5.9 10.1 5.6 6.5 9.1 1.2 1 1 0 1 1 1 0 Baculoviridae AC81 DUF1610 PF07754.11 NODE_85197_length_187_cov_7.967105_g77256_i0reverse_frame_2 - 7.2 6.7 9.1 8.1 6.5 0.2 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) PSD2 PF07624.11 NODE_85193_length_187_cov_13.703947_g77252_i0forward_frame_3 - 0.17 11.7 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1585) DUF3942 PF13078.6 NODE_85189_length_187_cov_22.572368_g77248_i0forward_frame_3 - 0.2 12.0 0.0 0.22 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3942) GPR15L PF15854.5 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_2 - 0.7 10.2 5.8 0.79 10.0 5.8 1.1 1 0 0 1 1 1 0 G-protein coupled receptor ligand 15 zf-trcl PF13451.6 NODE_85186_length_187_cov_23.269737_g77245_i0reverse_frame_2 - 2.4 8.1 8.4 0.7 9.8 1.0 2.1 2 0 0 2 2 2 0 Probable zinc-ribbon domain DUF5544 PF17698.1 NODE_85185_length_187_cov_25.026316_g77244_i0forward_frame_2 - 0.061 13.4 0.4 0.066 13.3 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5544) EF-hand_6 PF13405.6 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 8e-06 25.4 0.1 1.3e-05 24.8 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 7.3e-05 22.0 0.6 0.00019 20.8 0.1 1.8 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 0.0013 18.1 0.5 0.0028 17.1 0.1 1.8 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 0.002 18.5 0.1 0.0022 18.4 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_9 PF14658.6 NODE_85183_length_187_cov_26.046053_g77242_i0reverse_frame_3 - 0.029 14.7 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain DUF2610 PF11020.8 NODE_85183_length_187_cov_26.046053_g77242_i0forward_frame_2 - 0.19 11.6 0.0 0.24 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2610) Nucleoside_tran PF01733.18 NODE_85179_length_187_cov_27.697368_g77238_i0reverse_frame_3 - 0.043 13.2 0.2 0.045 13.1 0.2 1.0 1 0 0 1 1 1 0 Nucleoside transporter DUF4658 PF15555.6 NODE_85179_length_187_cov_27.697368_g77238_i0reverse_frame_2 - 0.12 12.5 1.7 0.13 12.4 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) RAP PF08373.10 NODE_85177_length_187_cov_29.190789_g77236_i0reverse_frame_3 - 9.7e-07 28.8 0.0 1.2e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 RAP domain DUF1719 PF08224.11 NODE_85173_length_187_cov_30.269737_g77232_i0reverse_frame_3 - 0.012 14.7 0.3 0.012 14.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) Phtf-FEM1B_bdg PF12129.8 NODE_85171_length_187_cov_32.736842_g77230_i0forward_frame_3 - 0.13 12.1 1.1 0.14 12.0 1.1 1.0 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor ETRAMP PF09716.10 NODE_85170_length_187_cov_33.855263_g77229_i0forward_frame_2 - 0.88 9.7 2.6 1.1 9.3 2.6 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Pec_lyase_N PF04431.13 NODE_85169_length_187_cov_34.039474_g77228_i0forward_frame_3 - 0.13 12.5 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Pectate lyase, N terminus Peptidase_C74 PF12387.8 NODE_85168_length_187_cov_34.131579_g77227_i0reverse_frame_2 - 0.51 9.8 4.2 0.56 9.7 4.2 1.1 1 0 0 1 1 1 0 Pestivirus NS2 peptidase DUF2457 PF10446.9 NODE_85167_length_187_cov_35.605263_g77226_i0reverse_frame_2 - 0.88 8.6 2.4 1 8.4 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF1441 PF07278.11 NODE_85165_length_187_cov_36.032895_g77224_i0reverse_frame_3 - 0.038 13.9 0.0 0.038 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1441) DUF1378 PF07125.11 NODE_85164_length_187_cov_38.625000_g77223_i0forward_frame_3 - 8.5 6.6 9.6 1.6 8.9 1.8 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1378) DCAF17 PF15802.5 NODE_85162_length_187_cov_39.006579_g77221_i0reverse_frame_3 - 0.23 10.1 0.0 0.26 10.0 0.0 1.0 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 17 PaO PF08417.12 NODE_85161_length_187_cov_39.605263_g77220_i0forward_frame_2 - 0.052 13.7 0.0 0.059 13.5 0.0 1.2 1 0 0 1 1 1 0 Pheophorbide a oxygenase SR-25 PF10500.9 NODE_85157_length_187_cov_43.092105_g77216_i0reverse_frame_3 - 0.24 11.0 15.6 0.25 10.9 15.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein BING4CT PF08149.11 NODE_85157_length_187_cov_43.092105_g77216_i0reverse_frame_2 - 0.48 10.3 2.8 0.62 9.9 2.8 1.2 1 0 0 1 1 1 0 BING4CT (NUC141) domain HTH_36 PF13730.6 NODE_85156_length_187_cov_43.697368_g77215_i0forward_frame_3 - 3.4 7.7 4.8 10 6.2 4.8 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain CxC1 PF18802.1 NODE_85156_length_187_cov_43.697368_g77215_i0forward_frame_2 - 0.047 13.9 0.1 0.049 13.8 0.1 1.1 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases Peptidase_C6 PF00851.18 NODE_85153_length_187_cov_45.585526_g77212_i0forward_frame_2 - 0.052 12.5 1.0 0.05 12.5 1.0 1.0 1 0 0 1 1 1 0 Helper component proteinase ZapB PF06005.12 NODE_85151_length_187_cov_45.763158_g77210_i0reverse_frame_3 - 0.0031 17.9 6.8 0.0038 17.6 6.8 1.1 1 0 0 1 1 1 1 Cell division protein ZapB DUF1764 PF08576.10 NODE_85149_length_187_cov_46.710526_g77208_i0reverse_frame_3 - 0.62 11.0 13.0 0.7 10.8 13.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF1764) baeRF_family2 PF18844.1 NODE_85147_length_187_cov_49.078947_g77206_i0forward_frame_3 - 0.037 14.1 0.0 0.042 13.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 Fijivirus_P9-2 PF06837.11 NODE_85145_length_187_cov_52.651316_g77204_i0forward_frame_2 - 6.6 6.1 7.3 7 6.0 7.3 1.0 1 0 0 1 1 1 0 Fijivirus P9-2 protein Leu_leader PF08054.11 NODE_85143_length_187_cov_53.414474_g77202_i0reverse_frame_3 - 0.092 12.3 0.1 0.14 11.8 0.1 1.2 1 0 0 1 1 1 0 Leucine operon leader peptide Bromodomain PF00439.25 NODE_85140_length_187_cov_56.532895_g77199_i0reverse_frame_2 - 0.03 14.4 0.2 0.034 14.2 0.2 1.1 1 0 0 1 1 1 0 Bromodomain Phage_ASH PF10554.9 NODE_85139_length_187_cov_59.802632_g77198_i0reverse_frame_3 - 0.058 13.7 0.0 0.064 13.6 0.0 1.1 1 0 0 1 1 1 0 Ash protein family DUF4328 PF14219.6 NODE_85139_length_187_cov_59.802632_g77198_i0reverse_frame_2 - 0.16 11.5 0.0 0.16 11.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4328) Spp-24 PF07448.11 NODE_85139_length_187_cov_59.802632_g77198_i0forward_frame_2 - 3.3 7.9 8.8 15 5.8 8.4 1.9 1 1 1 2 2 2 0 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain DUF1082 PF06449.11 NODE_85136_length_187_cov_63.223684_g77195_i0reverse_frame_3 - 0.12 12.2 0.2 0.16 11.8 0.2 1.3 1 1 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) RPS31 PF17067.5 NODE_85133_length_187_cov_67.921053_g77192_i0reverse_frame_2 - 0.028 14.6 0.2 0.032 14.4 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e Elf1 PF05129.13 NODE_85132_length_187_cov_68.250000_g77191_i0reverse_frame_3 - 0.16 12.0 6.5 0.21 11.7 6.5 1.2 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like ALMS_repeat PF18727.1 NODE_85131_length_187_cov_70.657895_g77190_i0reverse_frame_2 - 0.68 9.9 4.6 0.65 9.9 0.3 2.4 2 1 1 3 3 3 0 Alstrom syndrome repeat Colipase PF01114.18 NODE_85131_length_187_cov_70.657895_g77190_i0forward_frame_2 - 0.041 13.6 0.5 0.1 12.3 0.5 1.8 1 1 0 1 1 1 0 Colipase, N-terminal domain ATP-synt_ab_N PF02874.23 NODE_85128_length_187_cov_78.203947_g77187_i0reverse_frame_3 - 0.069 13.7 0.0 0.081 13.5 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, beta-barrel domain LtuA PF17446.2 NODE_85118_length_187_cov_132.394737_g77177_i0reverse_frame_3 - 0.033 14.6 0.0 0.045 14.1 0.0 1.2 1 0 0 1 1 1 0 Late transcription unit A Cyclin_C_2 PF16899.5 NODE_85116_length_187_cov_158.052632_g77175_i0reverse_frame_2 - 0.029 14.8 0.0 0.031 14.7 0.0 1.1 1 0 0 1 1 1 0 Cyclin C-terminal domain PPR_2 PF13041.6 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 8.2e-11 41.9 0.1 1.2e-05 25.4 0.0 1.8 1 1 1 2 2 2 2 PPR repeat family PPR PF01535.20 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 1.3e-06 28.3 0.0 5.3e-05 23.2 0.0 2.1 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 1.2e-05 24.9 0.3 9.3e-05 22.1 0.1 2.1 2 1 0 2 2 2 1 PPR repeat PPR_3 PF13812.6 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 0.00063 19.8 0.0 0.00075 19.5 0.0 1.1 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_long PF17177.4 NODE_85115_length_187_cov_160.625000_g77174_i0reverse_frame_2 - 0.032 13.6 0.0 0.032 13.6 0.0 1.0 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP PAPS_reduct PF01507.19 NODE_85114_length_187_cov_163.434211_g77173_i0reverse_frame_3 - 0.066 13.2 0.3 0.067 13.2 0.3 1.0 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family PCSK9_C1 PF18459.1 NODE_85114_length_187_cov_163.434211_g77173_i0reverse_frame_2 - 0.0026 17.9 0.2 0.003 17.7 0.2 1.2 1 0 0 1 1 1 1 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain DUF4033 PF13225.6 NODE_85113_length_187_cov_165.842105_g77172_i0forward_frame_3 - 0.023 14.7 0.5 0.027 14.4 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) Microtub_bind PF13931.6 NODE_85112_length_187_cov_168.717105_g77171_i0reverse_frame_3 - 0.045 14.1 0.1 0.047 14.1 0.1 1.0 1 0 0 1 1 1 0 Kinesin-associated microtubule-binding UPF0121 PF03661.13 NODE_85112_length_187_cov_168.717105_g77171_i0forward_frame_2 - 0.087 12.2 5.6 0.091 12.1 5.6 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0121) C1_1 PF00130.22 NODE_85108_length_187_cov_243.559211_g77167_i0forward_frame_3 - 0.65 9.9 15.3 69 3.4 14.9 2.1 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) LacY_symp PF01306.19 NODE_85103_length_187_cov_4463.368421_g77162_i0reverse_frame_2 - 0.56 8.9 2.2 0.59 8.8 2.2 1.0 1 0 0 1 1 1 0 LacY proton/sugar symporter S_4TM PF18159.1 NODE_85103_length_187_cov_4463.368421_g77162_i0forward_frame_2 - 0.058 12.7 0.1 0.058 12.7 0.1 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Kelch_5 PF13854.6 NODE_85100_length_188_cov_0.784314_g77159_i0forward_frame_2 - 0.16 12.0 0.1 0.56 10.3 0.1 1.8 2 0 0 2 2 2 0 Kelch motif zf-CCHC_6 PF15288.6 NODE_85099_length_188_cov_0.816993_g77158_i0forward_frame_2 - 0.18 11.7 0.2 0.26 11.2 0.2 1.3 1 0 0 1 1 1 0 Zinc knuckle APC_r PF05923.12 NODE_85095_length_188_cov_0.888889_g77154_i0reverse_frame_2 - 1 9.2 3.8 3.1 7.6 0.5 2.3 2 0 0 2 2 2 0 APC repeat DUF3335 PF11814.8 NODE_85091_length_188_cov_0.941176_g77150_i0forward_frame_2 - 0.056 12.9 0.1 0.16 11.4 0.0 1.6 1 1 1 2 2 2 0 Peptidase_C39 like family DUF22 PF01629.16 NODE_85091_length_188_cov_0.941176_g77150_i0forward_frame_2 - 0.2 11.4 0.0 0.23 11.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF22 GCM PF03615.15 NODE_85090_length_188_cov_0.941176_g77149_i0reverse_frame_3 - 1.3 8.9 12.7 1.6 8.6 12.7 1.0 1 0 0 1 1 1 0 GCM motif protein Shisa PF13908.6 NODE_85089_length_188_cov_0.947712_g77148_i0forward_frame_3 - 1.4 9.2 5.4 1.5 9.1 5.4 1.2 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator ECSCR PF15820.5 NODE_85089_length_188_cov_0.947712_g77148_i0forward_frame_3 - 3.4 7.5 5.0 3.6 7.4 5.0 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Grp7_allergen PF16984.5 NODE_85085_length_188_cov_0.973856_g77144_i0reverse_frame_3 - 0.1 12.7 1.1 0.1 12.6 1.1 1.1 1 0 0 1 1 1 0 Group 7 allergen BCAS2 PF05700.11 NODE_85085_length_188_cov_0.973856_g77144_i0reverse_frame_2 - 0.25 11.0 0.6 0.31 10.7 0.6 1.1 1 0 0 1 1 1 0 Breast carcinoma amplified sequence 2 (BCAS2) HRG PF16954.5 NODE_85084_length_188_cov_0.993464_g77143_i0forward_frame_3 - 3.1 8.3 7.6 4.7 7.7 7.6 1.4 1 0 0 1 1 1 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene Adhes-Ig_like PF09085.10 NODE_85083_length_188_cov_1.000000_g77142_i0reverse_frame_3 - 0.01 15.9 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 0 Adhesion molecule, immunoglobulin-like Importin_rep_6 PF18829.1 NODE_85083_length_188_cov_1.000000_g77142_i0reverse_frame_3 - 0.1 12.7 0.0 0.11 12.7 0.0 1.0 1 0 0 1 1 1 0 Importin repeat 6 Ribosomal_L19e PF01280.20 NODE_85083_length_188_cov_1.000000_g77142_i0reverse_frame_2 - 1.2 9.2 4.5 1.3 9.1 4.5 1.0 1 0 0 1 1 1 0 Ribosomal protein L19e # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks441.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks441.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks441.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks441.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TM_helix PF05552.12 NODE_85082_length_188_cov_1.000000_g77141_i0forward_frame_2 - 0.1 12.6 2.6 0.15 12.0 2.6 1.5 1 1 0 1 1 1 0 Conserved TM helix Tnp_22_trimer PF17489.2 NODE_85075_length_188_cov_1.013072_g77134_i0reverse_frame_3 - 0.13 12.3 0.1 0.2 11.7 0.1 1.3 1 0 0 1 1 1 0 L1 transposable element trimerization domain DUF2615 PF11027.8 NODE_85074_length_188_cov_1.013072_g77133_i0reverse_frame_2 - 0.036 14.2 0.2 0.041 14.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) DUF2650 PF10853.8 NODE_85074_length_188_cov_1.013072_g77133_i0forward_frame_2 - 0.0013 18.4 6.8 0.0022 17.7 6.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2650) Kelch_5 PF13854.6 NODE_85069_length_188_cov_1.032680_g77128_i0forward_frame_2 - 0.00045 20.1 0.3 0.00045 20.1 0.3 1.5 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 NODE_85069_length_188_cov_1.032680_g77128_i0forward_frame_2 - 0.0011 18.9 0.1 0.0011 18.9 0.1 1.4 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_85069_length_188_cov_1.032680_g77128_i0forward_frame_2 - 0.0071 16.6 0.0 0.0082 16.4 0.0 1.1 1 0 0 1 1 1 1 Galactose oxidase, central domain HD-ZIP_N PF04618.12 NODE_85060_length_188_cov_1.039216_g77119_i0forward_frame_3 - 0.09 13.3 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 HD-ZIP protein N terminus Moricin PF06451.11 NODE_85058_length_188_cov_1.039216_g77117_i0forward_frame_3 - 0.053 13.3 0.2 0.075 12.8 0.2 1.3 1 0 0 1 1 1 0 Moricin DUF3756 PF12581.8 NODE_85057_length_188_cov_1.039216_g77116_i0reverse_frame_3 - 0.0042 17.0 1.3 0.0042 17.0 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3756) PS_pyruv_trans PF04230.13 NODE_85056_length_188_cov_1.039216_g77115_i0reverse_frame_2 - 0.016 15.1 0.0 0.018 15.0 0.0 1.0 1 0 0 1 1 1 0 Polysaccharide pyruvyl transferase DUF4715 PF15835.5 NODE_85052_length_188_cov_1.039216_g77111_i0reverse_frame_2 - 0.053 13.6 0.0 0.059 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4715) PHD_4 PF16866.5 NODE_85051_length_188_cov_1.039216_g77110_i0reverse_frame_3 - 0.028 14.5 0.2 0.041 14.0 0.2 1.3 1 0 0 1 1 1 0 PHD-finger DZR PF12773.7 NODE_85051_length_188_cov_1.039216_g77110_i0reverse_frame_3 - 0.031 14.3 1.4 0.045 13.8 1.4 1.4 1 1 0 1 1 1 0 Double zinc ribbon zf-NADH-PPase PF09297.11 NODE_85038_length_188_cov_1.045752_g77097_i0forward_frame_2 - 3.4 7.4 6.4 14 5.5 6.4 1.9 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain Lamprin PF06403.11 NODE_85034_length_188_cov_1.045752_g77093_i0reverse_frame_3 - 0.043 13.8 1.4 0.045 13.7 1.4 1.1 1 0 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_85034_length_188_cov_1.045752_g77093_i0reverse_frame_2 - 0.076 13.0 3.1 0.094 12.7 3.1 1.2 1 0 0 1 1 1 0 Lamprin FAP PF07174.11 NODE_85034_length_188_cov_1.045752_g77093_i0forward_frame_3 - 0.2 11.1 6.1 0.2 11.1 6.1 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Herpes_capsid PF06112.11 NODE_85029_length_188_cov_1.045752_g77088_i0reverse_frame_2 - 0.029 14.4 1.6 0.029 14.5 1.6 1.1 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DCA16 PF15349.6 NODE_85029_length_188_cov_1.045752_g77088_i0forward_frame_3 - 0.13 11.8 1.3 0.13 11.8 1.3 1.1 1 0 0 1 1 1 0 DDB1- and CUL4-associated factor 16 IFT57 PF10498.9 NODE_85024_length_188_cov_1.045752_g77083_i0forward_frame_2 - 0.0087 15.1 1.4 0.0097 14.9 1.4 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 FSA_C PF10479.9 NODE_85023_length_188_cov_1.045752_g77082_i0reverse_frame_3 - 4.5 5.3 11.2 4.4 5.3 11.2 1.0 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Consortin_C PF15281.6 NODE_85023_length_188_cov_1.045752_g77082_i0forward_frame_3 - 2.8 8.0 6.1 0.28 11.2 2.0 1.5 1 1 1 2 2 2 0 Consortin C-terminus Phage_holin_3_6 PF07332.11 NODE_85023_length_188_cov_1.045752_g77082_i0forward_frame_2 - 0.63 10.1 11.2 0.69 10.0 11.2 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF1700 PF08006.11 NODE_85023_length_188_cov_1.045752_g77082_i0forward_frame_2 - 4.7 6.7 9.6 4.2 6.9 9.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Cas_GSU0053 PF09617.10 NODE_85020_length_188_cov_1.045752_g77079_i0forward_frame_2 - 0.044 13.7 0.0 0.048 13.6 0.0 1.0 1 0 0 1 1 1 0 CRISPR-associated protein GSU0053 (Cas_GSU0053) Palm_thioest PF02089.15 NODE_85018_length_188_cov_1.045752_g77077_i0reverse_frame_3 - 4.2e-10 39.9 0.0 4.3e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 NODE_85018_length_188_cov_1.045752_g77077_i0reverse_frame_3 - 0.022 14.3 0.0 0.022 14.3 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) FSH1 PF03959.13 NODE_85018_length_188_cov_1.045752_g77077_i0reverse_frame_3 - 0.023 14.4 0.0 0.023 14.4 0.0 1.1 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Fiji_64_capsid PF05880.11 NODE_85018_length_188_cov_1.045752_g77077_i0reverse_frame_3 - 0.22 10.1 0.0 0.24 10.0 0.0 1.0 1 0 0 1 1 1 0 Fijivirus 64 kDa capsid protein ABC2_membrane PF01061.24 NODE_85015_length_188_cov_1.045752_g77074_i0forward_frame_2 - 3.7e-09 36.3 6.6 3.8e-09 36.3 6.6 1.0 1 0 0 1 1 1 1 ABC-2 type transporter DUF5472 PF17566.2 NODE_85013_length_188_cov_1.045752_g77072_i0reverse_frame_3 - 0.053 13.5 0.0 0.071 13.1 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5472) CRM1_repeat PF18777.1 NODE_85010_length_188_cov_1.045752_g77069_i0forward_frame_2 - 0.021 14.3 1.0 0.039 13.5 1.0 1.4 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat PPP1R35_C PF15503.6 NODE_85006_length_188_cov_1.045752_g77065_i0reverse_frame_3 - 0.072 12.9 0.5 0.074 12.9 0.5 1.0 1 0 0 1 1 1 0 Protein phosphatase 1 regulatory subunit 35 C-terminus DUF5441 PF17513.2 NODE_85004_length_188_cov_1.045752_g77063_i0forward_frame_3 - 0.013 15.3 0.1 0.014 15.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5441) Lep_receptor_Ig PF06328.11 NODE_85003_length_188_cov_1.045752_g77062_i0reverse_frame_2 - 0.0055 16.6 0.1 0.0063 16.4 0.1 1.1 1 0 0 1 1 1 1 Ig-like C2-type domain DUF5323 PF17257.2 NODE_85001_length_188_cov_1.045752_g77060_i0forward_frame_2 - 0.0068 16.2 0.7 0.01 15.7 0.7 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5323) Lamprin PF06403.11 NODE_84999_length_188_cov_1.045752_g77058_i0forward_frame_3 - 0.073 13.0 3.1 0.091 12.7 3.1 1.2 1 0 0 1 1 1 0 Lamprin Nrap_D4 PF17405.2 NODE_84998_length_188_cov_1.045752_g77057_i0forward_frame_3 - 0.075 12.4 0.0 0.075 12.4 0.0 1.0 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 2OG-FeII_Oxy_3 PF13640.6 NODE_84995_length_188_cov_1.045752_g77054_i0forward_frame_3 - 1.4e-06 29.1 0.0 1.5e-06 29.0 0.0 1.0 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 NODE_84995_length_188_cov_1.045752_g77054_i0forward_frame_3 - 3.9e-06 27.4 0.1 3.9e-06 27.4 0.1 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF4957 PF16318.5 NODE_84991_length_188_cov_1.045752_g77050_i0reverse_frame_3 - 0.025 14.5 4.1 0.029 14.3 4.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) C5HCH PF17982.1 NODE_84991_length_188_cov_1.045752_g77050_i0reverse_frame_2 - 0.091 12.9 5.5 0.14 12.3 5.5 1.4 1 0 0 1 1 1 0 NSD Cys-His rich domain DUF2321 PF10083.9 NODE_84991_length_188_cov_1.045752_g77050_i0reverse_frame_2 - 0.11 12.2 2.4 0.11 12.1 2.4 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) Peptidase_C54 PF03416.19 NODE_84991_length_188_cov_1.045752_g77050_i0forward_frame_3 - 0.018 14.4 0.2 0.021 14.3 0.2 1.0 1 0 0 1 1 1 0 Peptidase family C54 DBD_Tnp_Hermes PF10683.9 NODE_84990_length_188_cov_1.045752_g77049_i0forward_frame_3 - 0.015 15.0 0.0 0.015 15.0 0.0 1.1 1 0 0 1 1 1 0 Hermes transposase DNA-binding domain DsbC PF11412.8 NODE_84989_length_188_cov_1.045752_g77048_i0reverse_frame_2 - 0.062 13.3 0.0 0.065 13.3 0.0 1.1 1 0 0 1 1 1 0 Disulphide bond corrector protein DsbC SRP72 PF08492.12 NODE_84988_length_188_cov_1.045752_g77047_i0reverse_frame_2 - 0.065 13.7 0.0 0.089 13.2 0.0 1.2 1 0 0 1 1 1 0 SRP72 RNA-binding domain SOCS_box PF07525.16 NODE_84982_length_188_cov_1.045752_g77041_i0reverse_frame_2 - 0.036 14.4 0.1 0.057 13.8 0.1 1.4 1 0 0 1 1 1 0 SOCS box Defensin_beta PF00711.19 NODE_84980_length_188_cov_1.045752_g77039_i0forward_frame_2 - 0.061 13.4 1.2 0.098 12.7 1.1 1.4 1 1 0 1 1 1 0 Beta defensin FeoB_associated PF12669.7 NODE_84979_length_188_cov_1.045752_g77038_i0reverse_frame_3 - 0.87 10.0 7.2 2 8.9 0.1 2.2 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein DUF5409 PF17421.2 NODE_84978_length_188_cov_1.045752_g77037_i0reverse_frame_3 - 0.14 12.9 1.0 0.17 12.6 1.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Cob_adeno_trans PF01923.18 NODE_84975_length_188_cov_1.045752_g77034_i0reverse_frame_2 - 0.21 11.7 0.6 0.25 11.5 0.6 1.3 1 1 0 1 1 1 0 Cobalamin adenosyltransferase Mito_fiss_reg PF05308.11 NODE_84975_length_188_cov_1.045752_g77034_i0forward_frame_2 - 0.63 10.1 6.3 0.62 10.1 6.3 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 NODE_84975_length_188_cov_1.045752_g77034_i0forward_frame_2 - 4.3 6.7 12.1 5.5 6.4 12.1 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal zf-C3HC4_4 PF15227.6 NODE_84971_length_188_cov_1.078431_g77030_i0reverse_frame_3 - 0.012 15.7 0.4 0.016 15.3 0.4 1.2 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING DUF3915 PF13054.6 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_3 - 0.0021 18.1 0.1 0.0021 18.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3915) DNA_pol_A PF00476.20 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_3 - 0.0085 15.2 0.0 0.0085 15.2 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase family A Atrophin-1 PF03154.15 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_3 - 0.73 8.0 1.5 0.77 8.0 1.5 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_2 - 0.015 15.3 0.6 0.016 15.2 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Noggin PF05806.12 NODE_84971_length_188_cov_1.078431_g77030_i0forward_frame_2 - 0.15 11.9 0.2 0.16 11.8 0.2 1.0 1 0 0 1 1 1 0 Noggin DNA_ligase_C PF17879.1 NODE_84967_length_188_cov_1.084967_g77026_i0reverse_frame_3 - 0.11 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 DNA ligase C-terminal domain DUF4769 PF15992.5 NODE_84967_length_188_cov_1.084967_g77026_i0reverse_frame_2 - 0.059 13.2 0.0 0.073 12.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4769) SH3BGR PF04908.15 NODE_84967_length_188_cov_1.084967_g77026_i0reverse_frame_2 - 0.071 13.3 0.0 0.078 13.2 0.0 1.1 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein Herpes_UL49_5 PF05702.11 NODE_84965_length_188_cov_1.098039_g77024_i0reverse_frame_2 - 0.015 15.3 0.6 0.021 14.9 0.6 1.2 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein DASH_Spc19 PF08287.11 NODE_84963_length_188_cov_1.111111_g77022_i0reverse_frame_3 - 0.28 11.1 0.4 0.33 10.8 0.4 1.0 1 0 0 1 1 1 0 Spc19 Plasmod_Pvs28 PF06247.11 NODE_84960_length_188_cov_1.117647_g77019_i0reverse_frame_2 - 0.026 14.8 0.3 0.05 13.9 0.0 1.6 2 1 0 2 2 2 0 Pvs28 EGF domain RFC1 PF08519.12 NODE_84957_length_188_cov_1.124183_g77016_i0reverse_frame_2 - 0.041 14.1 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Replication factor RFC1 C terminal domain PIG-P PF08510.12 NODE_84955_length_188_cov_1.156863_g77014_i0reverse_frame_3 - 0.079 12.9 0.5 0.087 12.7 0.5 1.1 1 0 0 1 1 1 0 PIG-P SecIII_SopE_N PF05364.14 NODE_84955_length_188_cov_1.156863_g77014_i0reverse_frame_2 - 0.06 13.4 0.1 0.07 13.2 0.1 1.2 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus LCE PF14672.6 NODE_84955_length_188_cov_1.156863_g77014_i0forward_frame_2 - 0.098 13.3 0.1 0.12 13.0 0.1 1.1 1 0 0 1 1 1 0 Late cornified envelope Far-17a_AIG1 PF04750.14 NODE_84945_length_188_cov_1.183007_g77004_i0reverse_frame_3 - 0.054 12.8 0.0 0.054 12.8 0.0 1.0 1 0 0 1 1 1 0 FAR-17a/AIG1-like protein HLH PF00010.26 NODE_84945_length_188_cov_1.183007_g77004_i0reverse_frame_3 - 0.064 13.2 0.0 0.084 12.9 0.0 1.2 1 0 0 1 1 1 0 Helix-loop-helix DNA-binding domain Transgly_assoc PF04226.13 NODE_84944_length_188_cov_1.183007_g77003_i0reverse_frame_2 - 0.0087 16.3 0.2 0.013 15.8 0.2 1.4 1 0 0 1 1 1 1 Transglycosylase associated protein ANAPC4_WD40 PF12894.7 NODE_84940_length_188_cov_1.196078_g76999_i0reverse_frame_3 - 0.014 15.7 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain DUF386 PF04074.12 NODE_84940_length_188_cov_1.196078_g76999_i0reverse_frame_3 - 0.07 13.0 0.0 0.07 13.0 0.0 1.0 1 0 0 1 1 1 0 YhcH/YjgK/YiaL Adenylsucc_synt PF00709.21 NODE_84938_length_188_cov_1.202614_g76997_i0forward_frame_2 - 2.1e-16 59.9 0.1 2.2e-16 59.8 0.1 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase MTA_R1 PF17226.2 NODE_84936_length_188_cov_1.209150_g76995_i0reverse_frame_3 - 0.075 13.2 2.8 0.089 12.9 2.8 1.2 1 0 0 1 1 1 0 MTA R1 domain Nudix_N_2 PF14803.6 NODE_84932_length_188_cov_1.215686_g76991_i0reverse_frame_2 - 0.051 13.5 0.2 0.11 12.5 0.2 1.6 1 0 0 1 1 1 0 Nudix N-terminal DUF4533 PF15047.6 NODE_84932_length_188_cov_1.215686_g76991_i0reverse_frame_2 - 0.061 12.9 0.0 0.064 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4533) Aida_C2 PF14186.6 NODE_84928_length_188_cov_1.222222_g76987_i0reverse_frame_2 - 0.081 12.5 0.0 0.081 12.5 0.0 1.0 1 0 0 1 1 1 0 Cytoskeletal adhesion Lamprin PF06403.11 NODE_84926_length_188_cov_1.228758_g76985_i0forward_frame_3 - 0.02 14.8 0.4 0.022 14.7 0.4 1.1 1 0 0 1 1 1 0 Lamprin DUF4672 PF15716.5 NODE_84923_length_188_cov_1.235294_g76982_i0forward_frame_3 - 0.01 15.5 0.1 0.012 15.3 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) DUF5061 PF16587.5 NODE_84923_length_188_cov_1.235294_g76982_i0forward_frame_2 - 0.0093 16.0 0.1 0.01 15.8 0.1 1.1 1 0 0 1 1 1 1 17 kDa common-antigen outer membrane protein Hep_core_N PF08290.11 NODE_84920_length_188_cov_1.248366_g76979_i0reverse_frame_2 - 5.5 7.1 9.4 11 6.1 0.2 3.1 3 0 0 3 3 3 0 Hepatitis core protein, putative zinc finger SelP_N PF04592.14 NODE_84918_length_188_cov_1.254902_g76977_i0forward_frame_2 - 2.3 7.6 12.7 2.3 7.6 12.7 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region DUF1356 PF07092.12 NODE_84916_length_188_cov_1.267974_g76975_i0reverse_frame_2 - 0.48 9.6 3.6 0.47 9.7 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1356) Coatomer_WDAD PF04053.14 NODE_84916_length_188_cov_1.267974_g76975_i0forward_frame_2 - 2.6e-08 33.3 1.3 3.1e-08 33.1 1.3 1.0 1 0 0 1 1 1 1 Coatomer WD associated region Enterotoxin_a PF01375.17 NODE_84913_length_188_cov_1.281046_g76972_i0forward_frame_3 - 0.17 11.5 0.1 0.17 11.5 0.1 1.0 1 0 0 1 1 1 0 Heat-labile enterotoxin alpha chain TcdB_toxin_midC PF12255.8 NODE_84911_length_188_cov_1.294118_g76970_i0reverse_frame_2 - 0.011 15.8 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 0 Insecticide toxin TcdB middle/C-terminal region RabGAP-TBC PF00566.18 NODE_84910_length_188_cov_1.294118_g76969_i0forward_frame_3 - 0.05 13.3 1.5 0.051 13.2 1.5 1.0 1 0 0 1 1 1 0 Rab-GTPase-TBC domain DUF4070 PF13282.6 NODE_84905_length_188_cov_1.300654_g76964_i0reverse_frame_3 - 0.12 12.5 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) Toxin_24 PF08094.11 NODE_84903_length_188_cov_1.300654_g76962_i0forward_frame_2 - 0.08 12.8 0.5 0.08 12.8 0.5 2.0 2 0 0 2 2 2 0 Conotoxin TVIIA/GS family Serglycin PF04360.12 NODE_84902_length_188_cov_1.307190_g76961_i0reverse_frame_2 - 0.013 15.4 4.2 0.014 15.4 4.2 1.2 1 0 0 1 1 1 0 Serglycin Fungus-induced PF10917.8 NODE_84902_length_188_cov_1.307190_g76961_i0reverse_frame_2 - 7.3 7.0 11.4 77 3.7 11.4 2.1 1 1 0 1 1 1 0 Fungus-induced protein SSP160 PF06933.11 NODE_84902_length_188_cov_1.307190_g76961_i0forward_frame_2 - 8.6 4.4 10.0 7.6 4.6 10.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 TTL PF03133.15 NODE_84896_length_188_cov_1.307190_g76955_i0forward_frame_2 - 6.9e-16 58.2 0.3 7.4e-16 58.1 0.3 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family SelR PF01641.18 NODE_84895_length_188_cov_1.307190_g76954_i0reverse_frame_3 - 0.024 14.7 0.1 0.025 14.6 0.1 1.1 1 0 0 1 1 1 0 SelR domain 2TM PF13239.6 NODE_84888_length_188_cov_1.320261_g76947_i0forward_frame_3 - 2 8.8 6.1 2.5 8.5 6.1 1.1 1 0 0 1 1 1 0 2TM domain GTP_EFTU PF00009.27 NODE_84887_length_188_cov_1.326797_g76946_i0forward_frame_3 - 4.2e-15 55.8 0.1 4.5e-15 55.7 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain zf-AN1 PF01428.16 NODE_84887_length_188_cov_1.326797_g76946_i0forward_frame_2 - 0.71 10.1 0.1 0.71 10.1 0.1 2.2 2 0 0 2 2 2 0 AN1-like Zinc finger Astro_capsid_p PF12226.8 NODE_84886_length_188_cov_1.326797_g76945_i0forward_frame_3 - 0.0069 15.6 4.0 0.0071 15.5 4.0 1.0 1 0 0 1 1 1 1 Turkey astrovirus capsid protein E1_UFD PF09358.10 NODE_84886_length_188_cov_1.326797_g76945_i0forward_frame_3 - 0.16 12.7 1.6 0.18 12.6 1.6 1.0 1 0 0 1 1 1 0 Ubiquitin fold domain Pox_EPC_I2-L1 PF12575.8 NODE_84883_length_188_cov_1.359477_g76942_i0reverse_frame_3 - 0.019 15.2 0.2 0.023 14.9 0.2 1.0 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 RSN1_TM PF13967.6 NODE_84883_length_188_cov_1.359477_g76942_i0reverse_frame_3 - 0.019 14.7 0.2 0.019 14.7 0.2 1.1 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport TMEM132D_C PF15706.5 NODE_84883_length_188_cov_1.359477_g76942_i0reverse_frame_3 - 0.14 11.9 0.3 0.14 11.9 0.3 1.7 1 1 1 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term FAS_N PF17828.1 NODE_84880_length_188_cov_1.372549_g76939_i0reverse_frame_3 - 0.069 13.2 0.2 0.072 13.1 0.2 1.2 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta LisH_TPL PF17814.1 NODE_84878_length_188_cov_1.385621_g76937_i0reverse_frame_3 - 0.19 11.4 0.8 0.36 10.5 0.8 1.4 1 0 0 1 1 1 0 LisH-like dimerisation domain zf-TRAF_2 PF15965.5 NODE_84878_length_188_cov_1.385621_g76937_i0forward_frame_3 - 0.05 14.1 1.3 0.055 13.9 1.3 1.1 1 0 0 1 1 1 0 TRAF-like zinc-finger DUF4999 PF16390.5 NODE_84876_length_188_cov_1.398693_g76935_i0reverse_frame_2 - 0.0095 16.2 0.2 0.012 15.8 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function Prok-E2_E PF14462.6 NODE_84875_length_188_cov_1.398693_g76934_i0reverse_frame_3 - 0.075 12.8 0.0 0.094 12.5 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family E MltA PF03562.17 NODE_84871_length_188_cov_1.405229_g76930_i0reverse_frame_2 - 4.3e-17 62.6 0.6 4.5e-17 62.6 0.6 1.0 1 0 0 1 1 1 1 MltA specific insert domain TPR_2 PF07719.17 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 5e-05 23.1 1.7 0.01 15.9 0.5 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.00074 19.4 1.5 0.012 15.5 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.0035 17.1 0.2 0.024 14.4 0.1 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.0036 17.6 2.2 0.0066 16.7 2.2 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.037 13.7 0.5 0.06 13.0 0.2 1.5 2 0 0 2 2 2 0 TPR repeat TPR_14 PF13428.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.054 14.3 3.8 0.21 12.5 0.5 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 0.11 13.1 6.0 0.23 12.1 6.0 1.5 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_84870_length_188_cov_1.411765_g76929_i0forward_frame_3 - 1.3 9.9 5.8 1.1 10.1 0.3 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat Bcl-2 PF00452.19 NODE_84869_length_188_cov_1.418301_g76928_i0reverse_frame_3 - 0.046 14.4 0.0 0.048 14.3 0.0 1.1 1 0 0 1 1 1 0 Apoptosis regulator proteins, Bcl-2 family ThrE_2 PF12821.7 NODE_84863_length_188_cov_1.464052_g76922_i0forward_frame_2 - 0.017 15.2 1.0 0.02 15.0 1.0 1.0 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE cNMP_binding PF00027.29 NODE_84862_length_188_cov_1.483660_g76921_i0forward_frame_2 - 0.042 13.9 0.0 0.049 13.7 0.0 1.2 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain MPM1 PF17234.2 NODE_84857_length_188_cov_1.509804_g76916_i0reverse_frame_3 - 0.036 14.3 5.1 0.045 14.0 5.1 1.2 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 zf-MYST PF17772.1 NODE_84855_length_188_cov_1.516340_g76914_i0reverse_frame_3 - 0.0013 18.3 0.9 0.0018 17.8 0.9 1.2 1 0 0 1 1 1 1 MYST family zinc finger domain DUF1016_N PF17761.1 NODE_84855_length_188_cov_1.516340_g76914_i0forward_frame_3 - 0.18 12.0 0.0 0.2 11.8 0.0 1.1 1 0 0 1 1 1 0 DUF1016 N-terminal domain CxC6 PF18721.1 NODE_84846_length_188_cov_1.535948_g76905_i0reverse_frame_3 - 0.43 10.9 5.9 0.39 11.0 0.2 2.0 2 0 0 2 2 2 0 CxC6 like cysteine cluster associated with KDZ transposases Herpes_UL20 PF04544.12 NODE_84846_length_188_cov_1.535948_g76905_i0forward_frame_2 - 0.048 14.0 0.8 0.052 13.9 0.8 1.0 1 0 0 1 1 1 0 Herpesvirus egress protein UL20 Tmpp129 PF10272.9 NODE_84845_length_188_cov_1.535948_g76904_i0reverse_frame_2 - 0.41 9.9 3.1 0.48 9.7 3.1 1.0 1 0 0 1 1 1 0 Putative transmembrane protein precursor cEGF PF12662.7 NODE_84840_length_188_cov_1.549020_g76899_i0reverse_frame_3 - 0.0051 16.7 2.7 0.0092 15.9 2.7 1.4 1 0 0 1 1 1 1 Complement Clr-like EGF-like FXa_inhibition PF14670.6 NODE_84840_length_188_cov_1.549020_g76899_i0reverse_frame_3 - 0.047 14.0 7.5 0.068 13.5 7.5 1.2 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site Inhibitor_Mig-6 PF11555.8 NODE_84836_length_188_cov_1.549020_g76895_i0reverse_frame_2 - 0.016 15.3 2.6 0.021 14.9 2.6 1.1 1 0 0 1 1 1 0 EGFR receptor inhibitor Mig-6 DUF594 PF04578.13 NODE_84833_length_188_cov_1.555556_g76892_i0reverse_frame_3 - 0.0082 15.7 0.0 0.011 15.3 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF594 Herpes_US9 PF06072.11 NODE_84832_length_188_cov_1.555556_g76891_i0forward_frame_2 - 0.0024 17.7 0.2 0.0034 17.2 0.2 1.2 1 0 0 1 1 1 1 Alphaherpesvirus tegument protein US9 Luteo_PO PF04662.13 NODE_84831_length_188_cov_1.562092_g76890_i0forward_frame_2 - 0.079 12.6 0.0 0.087 12.5 0.0 1.0 1 0 0 1 1 1 0 Luteovirus P0 protein HECW_N PF16562.5 NODE_84829_length_188_cov_1.562092_g76888_i0reverse_frame_3 - 0.12 12.2 0.7 0.11 12.3 0.7 1.1 1 0 0 1 1 1 0 N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2 Ada_Zn_binding PF02805.16 NODE_84825_length_188_cov_1.562092_g76884_i0forward_frame_3 - 0.013 15.5 1.2 0.026 14.5 1.2 1.5 1 0 0 1 1 1 0 Metal binding domain of Ada Lem_TRP PF08262.11 NODE_84817_length_188_cov_1.568627_g76876_i0forward_frame_2 - 0.48 10.5 0.8 0.48 10.5 0.8 2.7 3 0 0 3 3 3 0 Leucophaea maderae tachykinin-related peptide DUF1999 PF09390.10 NODE_84816_length_188_cov_1.568627_g76875_i0reverse_frame_2 - 0.17 11.5 0.1 0.19 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) DUF5480 PF17576.2 NODE_84810_length_188_cov_1.568627_g76869_i0reverse_frame_3 - 0.016 15.1 1.8 0.02 14.9 1.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5480) DUF2650 PF10853.8 NODE_84809_length_188_cov_1.568627_g76868_i0forward_frame_3 - 0.049 13.4 0.4 0.076 12.7 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) AA_permease_N PF08403.10 NODE_84808_length_188_cov_1.568627_g76867_i0reverse_frame_3 - 0.0094 15.4 0.1 0.012 15.1 0.1 1.1 1 0 0 1 1 1 1 Amino acid permease N-terminal Bap31 PF05529.12 NODE_84807_length_188_cov_1.568627_g76866_i0reverse_frame_3 - 0.19 11.6 0.0 0.21 11.4 0.0 1.1 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region DUF4736 PF15883.5 NODE_84806_length_188_cov_1.568627_g76865_i0reverse_frame_3 - 0.06 13.1 0.2 0.063 13.0 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) Rab_bind PF16704.5 NODE_84806_length_188_cov_1.568627_g76865_i0forward_frame_2 - 0.049 13.7 0.2 6.1 7.0 0.0 2.1 1 1 1 2 2 2 0 Rab binding domain Pox_polyA_pol PF03296.13 NODE_84800_length_188_cov_1.601307_g76859_i0reverse_frame_3 - 0.0022 17.9 0.1 0.0024 17.8 0.1 1.1 1 0 0 1 1 1 1 Poxvirus poly(A) polymerase nucleotidyltransferase domain NS3_envE PF02723.14 NODE_84799_length_188_cov_1.607843_g76858_i0forward_frame_3 - 0.02 14.9 0.4 0.027 14.5 0.4 1.2 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E ADIP PF11559.8 NODE_84797_length_188_cov_1.640523_g76856_i0reverse_frame_2 - 0.0029 17.7 2.3 0.0029 17.7 2.3 1.0 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding TMF_DNA_bd PF12329.8 NODE_84797_length_188_cov_1.640523_g76856_i0reverse_frame_2 - 0.11 12.5 2.3 2 8.5 0.1 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding Tropomyosin_1 PF12718.7 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.00039 20.6 5.0 0.00039 20.6 5.0 1.0 1 0 0 1 1 1 1 Tropomyosin like XhlA PF10779.9 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.0046 17.1 3.9 0.0046 17.1 3.9 1.4 1 1 1 2 2 2 1 Haemolysin XhlA Lebercilin PF15619.6 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.011 15.4 5.5 0.012 15.3 5.5 1.0 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease KIX PF02172.16 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.028 14.7 0.2 0.033 14.5 0.2 1.1 1 0 0 1 1 1 0 KIX domain TMF_DNA_bd PF12329.8 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.03 14.3 6.5 0.041 13.9 6.5 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Histone_HNS PF00816.21 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.11 13.4 2.8 0.13 13.1 2.8 1.2 1 0 0 1 1 1 0 H-NS histone family SlyX PF04102.12 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.12 13.0 1.8 0.18 12.4 1.8 1.4 1 1 0 1 1 1 0 SlyX MtrG PF04210.13 NODE_84796_length_188_cov_1.640523_g76855_i0reverse_frame_3 - 0.31 10.9 0.7 1 9.3 0.1 1.9 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G PD40 PF07676.12 NODE_84794_length_188_cov_1.660131_g76853_i0reverse_frame_2 - 0.086 12.8 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 WD40-like Beta Propeller Repeat RVT_1 PF00078.27 NODE_84792_length_188_cov_1.673203_g76851_i0reverse_frame_2 - 3.2e-06 26.8 0.0 3.3e-06 26.8 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Phenol_monoox PF04663.12 NODE_84788_length_188_cov_1.686275_g76847_i0forward_frame_3 - 0.018 15.1 0.1 0.031 14.4 0.1 1.3 1 0 0 1 1 1 0 Phenol hydroxylase conserved region DUF1196 PF06709.11 NODE_84788_length_188_cov_1.686275_g76847_i0forward_frame_3 - 0.15 12.3 0.1 0.23 11.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1196) Chaperone_III PF07824.12 NODE_84785_length_188_cov_1.712418_g76844_i0reverse_frame_2 - 0.023 14.9 0.3 0.023 14.9 0.3 1.0 1 0 0 1 1 1 0 Type III secretion chaperone domain DUF3915 PF13054.6 NODE_84784_length_188_cov_1.718954_g76843_i0forward_frame_2 - 0.13 12.3 1.4 0.14 12.2 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) HgmA PF04209.13 NODE_84781_length_188_cov_1.751634_g76840_i0forward_frame_3 - 0.067 11.9 0.0 0.077 11.7 0.0 1.0 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase RIF5_SNase_1 PF18187.1 NODE_84780_length_188_cov_1.751634_g76839_i0reverse_frame_3 - 0.062 13.0 0.0 0.073 12.8 0.0 1.1 1 0 0 1 1 1 0 TbRIF5 SNase domain 1 Destabilase PF05497.12 NODE_84778_length_188_cov_1.751634_g76837_i0reverse_frame_2 - 0.039 14.3 2.1 0.04 14.3 2.1 1.1 1 0 0 1 1 1 0 Destabilase Glyco_hydro_31 PF01055.26 NODE_84777_length_188_cov_1.758170_g76836_i0reverse_frame_2 - 1.3e-07 31.2 0.1 1.3e-07 31.2 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 7TM_GPCR_Srh PF10318.9 NODE_84774_length_188_cov_1.777778_g76833_i0reverse_frame_3 - 0.013 14.5 1.8 0.015 14.3 1.8 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh Peptidase_C1 PF00112.23 NODE_84772_length_188_cov_1.784314_g76831_i0reverse_frame_2 - 0.0011 19.0 0.0 0.0012 18.9 0.0 1.0 1 0 0 1 1 1 1 Papain family cysteine protease DUF2434 PF10361.9 NODE_84770_length_188_cov_1.790850_g76829_i0forward_frame_3 - 0.038 13.0 2.9 0.041 12.9 2.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2434) DUF4761 PF15958.5 NODE_84768_length_188_cov_1.797386_g76827_i0reverse_frame_3 - 0.072 13.2 0.0 0.074 13.2 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4761) MCM_OB PF17207.3 NODE_84764_length_188_cov_1.816993_g76823_i0reverse_frame_3 - 9.2e-14 51.4 2.0 9.3e-14 51.4 2.0 1.0 1 0 0 1 1 1 1 MCM OB domain DUF2039 PF10217.9 NODE_84764_length_188_cov_1.816993_g76823_i0reverse_frame_3 - 0.015 15.6 2.0 0.016 15.5 2.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) BRD4_CDT PF17105.5 NODE_84763_length_188_cov_1.816993_g76822_i0forward_frame_3 - 0.032 13.8 3.3 0.048 13.3 0.8 2.2 2 0 0 2 2 2 0 C-terminal domain of bromodomain protein 4 WD40 PF00400.32 NODE_84761_length_188_cov_1.823529_g76820_i0reverse_frame_3 - 1.3e-07 32.2 1.4 2.7e-07 31.2 0.2 1.9 2 0 0 2 2 2 1 WD domain, G-beta repeat Cys_rich_KTR PF14205.6 NODE_84759_length_188_cov_1.823529_g76818_i0reverse_frame_2 - 0.017 14.9 0.2 0.017 14.9 0.2 1.5 2 0 0 2 2 2 0 Cysteine-rich KTR Pox_E10 PF04805.12 NODE_84759_length_188_cov_1.823529_g76818_i0reverse_frame_2 - 0.068 13.0 0.4 0.073 12.9 0.4 1.2 1 0 0 1 1 1 0 E10-like protein conserved region PNPase_C PF12111.8 NODE_84759_length_188_cov_1.823529_g76818_i0forward_frame_3 - 0.038 13.4 0.0 0.056 12.9 0.0 1.3 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal Mid2 PF04478.12 NODE_84758_length_188_cov_1.823529_g76817_i0reverse_frame_2 - 0.001 18.9 1.0 0.0012 18.7 1.0 1.1 1 0 0 1 1 1 1 Mid2 like cell wall stress sensor DUF2237 PF09996.9 NODE_84758_length_188_cov_1.823529_g76817_i0forward_frame_2 - 0.021 14.8 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2237) Citrus_P18 PF05520.11 NODE_84755_length_188_cov_1.830065_g76814_i0reverse_frame_2 - 0.062 13.0 0.2 0.066 12.9 0.2 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P18 protein UPF1_Zn_bind PF09416.10 NODE_84754_length_188_cov_1.830065_g76813_i0reverse_frame_3 - 0.037 14.0 0.2 0.054 13.5 0.2 1.3 1 1 0 1 1 1 0 RNA helicase (UPF2 interacting domain) PcrB PF01884.17 NODE_84754_length_188_cov_1.830065_g76813_i0reverse_frame_3 - 0.081 12.4 0.0 0.088 12.3 0.0 1.0 1 0 0 1 1 1 0 PcrB family Quaking_NLS PF16551.5 NODE_84752_length_188_cov_1.843137_g76811_i0forward_frame_3 - 0.1 12.3 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Putative nuclear localisation signal of quaking DNA_ligase_ZBD PF03119.16 NODE_84752_length_188_cov_1.843137_g76811_i0forward_frame_2 - 0.1 12.7 0.8 0.17 11.9 0.1 1.7 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain YopE PF03545.13 NODE_84751_length_188_cov_1.843137_g76810_i0forward_frame_2 - 0.15 12.3 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Yersinia virulence determinant (YopE) 7TM_GPCR_Srh PF10318.9 NODE_84743_length_188_cov_1.960784_g76802_i0reverse_frame_3 - 0.055 12.5 0.1 0.06 12.4 0.1 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh CNOT11 PF10155.9 NODE_84740_length_188_cov_1.973856_g76799_i0forward_frame_3 - 0.083 13.1 0.1 0.087 13.0 0.1 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 11 Toxin_2 PF00451.19 NODE_84736_length_188_cov_1.993464_g76795_i0forward_frame_2 - 5.4 7.4 7.7 5.2 7.5 3.6 2.2 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 Fer4_3 PF12798.7 NODE_84733_length_188_cov_2.032680_g76792_i0reverse_frame_2 - 4 8.6 9.5 3.9 8.6 7.0 2.2 2 1 0 2 2 2 0 4Fe-4S binding domain Laminin_EGF PF00053.24 NODE_84731_length_188_cov_2.032680_g76790_i0reverse_frame_2 - 0.26 11.4 7.0 0.077 13.2 3.9 1.7 1 1 1 2 2 2 0 Laminin EGF domain Glyco_trans_2_3 PF13632.6 NODE_84730_length_188_cov_2.058824_g76789_i0reverse_frame_3 - 0.00085 19.3 1.7 0.00095 19.1 1.7 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 DUF4623 PF15416.6 NODE_84727_length_188_cov_2.078431_g76786_i0forward_frame_3 - 0.0064 15.1 0.8 0.0067 15.1 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4623) DUF953 PF06110.11 NODE_84723_length_188_cov_2.091503_g76782_i0reverse_frame_2 - 0.029 14.0 0.1 0.032 13.9 0.1 1.0 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) DPBB_1 PF03330.18 NODE_84717_length_188_cov_2.183007_g76776_i0reverse_frame_3 - 0.12 12.7 0.5 0.14 12.5 0.5 1.1 1 0 0 1 1 1 0 Lytic transglycolase Defensin_4 PF07936.12 NODE_84717_length_188_cov_2.183007_g76776_i0forward_frame_3 - 0.009 15.9 2.5 0.04 13.8 2.4 2.0 1 1 0 1 1 1 1 Potassium-channel blocking toxin PPR_2 PF13041.6 NODE_84716_length_188_cov_2.183007_g76775_i0forward_frame_3 - 0.0031 17.7 0.0 0.016 15.4 0.0 1.9 2 0 0 2 2 2 1 PPR repeat family PPR_long PF17177.4 NODE_84716_length_188_cov_2.183007_g76775_i0forward_frame_3 - 0.043 13.2 0.0 0.045 13.1 0.0 1.0 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 NODE_84716_length_188_cov_2.183007_g76775_i0forward_frame_3 - 0.047 13.8 0.1 0.055 13.6 0.1 1.2 1 0 0 1 1 1 0 Pentatricopeptide repeat domain UDPGP PF01704.18 NODE_84716_length_188_cov_2.183007_g76775_i0forward_frame_2 - 0.045 12.4 0.0 0.05 12.3 0.0 1.0 1 0 0 1 1 1 0 UTP--glucose-1-phosphate uridylyltransferase Nif11 PF07862.11 NODE_84714_length_188_cov_2.196078_g76773_i0reverse_frame_3 - 0.12 12.8 0.1 0.69 10.3 0.0 2.0 2 0 0 2 2 2 0 Nif11 domain DUF4307 PF14155.6 NODE_84711_length_188_cov_2.222222_g76770_i0forward_frame_2 - 0.15 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF2706 PF10913.8 NODE_84702_length_188_cov_2.366013_g76761_i0reverse_frame_3 - 0.036 13.9 6.2 0.044 13.6 6.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2706) Lactamase_B_4 PF13691.6 NODE_84702_length_188_cov_2.366013_g76761_i0forward_frame_2 - 0.026 14.2 0.0 0.05 13.3 0.0 1.5 1 1 1 2 2 2 0 tRNase Z endonuclease Atg14 PF10186.9 NODE_84698_length_188_cov_2.444444_g76757_i0forward_frame_2 - 0.055 12.5 0.3 0.056 12.5 0.3 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 HEPN-like_int PF18867.1 NODE_84697_length_188_cov_2.450980_g76756_i0forward_frame_3 - 0.06 13.2 0.1 0.061 13.2 0.1 1.1 1 0 0 1 1 1 0 HEPN-like integron domain DHFR_1 PF00186.19 NODE_84697_length_188_cov_2.450980_g76756_i0forward_frame_2 - 5.9e-07 29.3 0.0 6e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Dihydrofolate reductase Glyco_trans_2_3 PF13632.6 NODE_84695_length_188_cov_2.477124_g76754_i0reverse_frame_3 - 0.00057 19.8 1.5 0.00064 19.7 1.5 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Ser_hydrolase PF06821.13 NODE_84685_length_188_cov_2.607843_g76744_i0reverse_frame_3 - 0.043 13.7 0.0 0.046 13.6 0.0 1.0 1 0 0 1 1 1 0 Serine hydrolase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks442.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks442.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks442.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks442.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:33:54 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PAH PF02671.21 NODE_84685_length_188_cov_2.607843_g76744_i0forward_frame_3 - 0.049 13.8 0.0 0.061 13.5 0.0 1.3 1 0 0 1 1 1 0 Paired amphipathic helix repeat Tudor_1_RapA PF18339.1 NODE_84683_length_188_cov_2.614379_g76742_i0reverse_frame_2 - 0.053 13.5 0.0 0.072 13.0 0.0 1.2 1 0 0 1 1 1 0 RapA N-terminal Tudor like domain 1 H-kinase_dim PF02895.14 NODE_84682_length_188_cov_2.620915_g76741_i0forward_frame_2 - 2.9e-13 50.0 0.2 4.4e-13 49.4 0.2 1.2 1 0 0 1 1 1 1 Signal transducing histidine kinase, homodimeric domain MAR_sialic_bdg PF10564.9 NODE_84681_length_188_cov_2.653595_g76740_i0reverse_frame_2 - 0.035 14.2 5.4 0.04 13.9 5.4 1.2 1 0 0 1 1 1 0 Sialic-acid binding micronemal adhesive repeat vMSA PF00695.19 NODE_84680_length_188_cov_2.679739_g76739_i0reverse_frame_3 - 5.4 6.0 8.7 5.7 5.9 8.7 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Ferlin_C PF16165.5 NODE_84680_length_188_cov_2.679739_g76739_i0reverse_frame_3 - 6 6.8 7.2 6.5 6.7 7.2 1.0 1 0 0 1 1 1 0 Ferlin C-terminus GluR_Homer-bdg PF10606.9 NODE_84679_length_188_cov_2.725490_g76738_i0forward_frame_2 - 0.043 14.0 1.6 0.043 14.0 1.6 1.7 2 0 0 2 2 2 0 Homer-binding domain of metabotropic glutamate receptor Metallothio_11 PF02066.15 NODE_84678_length_188_cov_2.751634_g76737_i0reverse_frame_3 - 0.15 12.2 8.1 0.24 11.6 5.2 2.1 2 0 0 2 2 2 0 Metallothionein family 11 RCC1 PF00415.18 NODE_84677_length_188_cov_2.771242_g76736_i0reverse_frame_2 - 4.9e-09 36.7 0.0 7.3e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat Keratin PF02422.16 NODE_84675_length_188_cov_2.882353_g76734_i0reverse_frame_2 - 0.0095 15.6 0.3 0.012 15.3 0.3 1.2 1 0 0 1 1 1 1 Keratin BAH PF01426.18 NODE_84672_length_188_cov_2.921569_g76731_i0forward_frame_3 - 0.01 15.7 0.0 0.011 15.6 0.0 1.0 1 0 0 1 1 1 0 BAH domain TT_ORF2 PF02957.15 NODE_84670_length_188_cov_2.986928_g76729_i0forward_frame_2 - 0.33 11.9 2.5 0.32 11.9 2.5 1.1 1 0 0 1 1 1 0 TT viral ORF2 CRT-like PF08627.10 NODE_84667_length_188_cov_3.071895_g76726_i0reverse_frame_2 - 0.0056 15.7 0.1 0.0057 15.6 0.1 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like Chlorophyllase PF07224.11 NODE_84667_length_188_cov_3.071895_g76726_i0forward_frame_2 - 0.088 11.8 0.0 0.094 11.7 0.0 1.0 1 0 0 1 1 1 0 Chlorophyllase RINGv PF12906.7 NODE_84665_length_188_cov_3.111111_g76724_i0forward_frame_3 - 2.8e-13 49.8 3.4 4.4e-13 49.1 3.4 1.3 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 NODE_84665_length_188_cov_3.111111_g76724_i0forward_frame_3 - 0.0024 18.0 3.3 0.0038 17.4 3.3 1.3 1 1 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 NODE_84665_length_188_cov_3.111111_g76724_i0forward_frame_3 - 0.033 14.5 3.2 0.076 13.4 3.2 1.6 1 1 0 1 1 1 0 Ring finger domain Dam PF05869.11 NODE_84664_length_188_cov_3.111111_g76723_i0reverse_frame_3 - 0.12 11.9 0.0 0.14 11.7 0.0 1.0 1 0 0 1 1 1 0 DNA N-6-adenine-methyltransferase (Dam) PuR_N PF09182.10 NODE_84664_length_188_cov_3.111111_g76723_i0forward_frame_2 - 0.05 13.5 0.1 0.078 12.9 0.1 1.3 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal YqfD PF06898.11 NODE_84662_length_188_cov_3.156863_g76721_i0reverse_frame_3 - 0.69 8.7 2.8 0.66 8.8 2.8 1.0 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD Fer4_4 PF12800.7 NODE_84661_length_188_cov_3.163399_g76720_i0forward_frame_2 - 2.5 8.8 7.3 0.92 10.2 4.6 1.9 2 1 0 2 2 2 0 4Fe-4S binding domain Clusterin PF01093.17 NODE_84660_length_188_cov_3.176471_g76719_i0reverse_frame_2 - 6 5.8 7.9 8 5.4 7.9 1.2 1 0 0 1 1 1 0 Clusterin Nucleos_tra2_C PF07662.13 NODE_84658_length_188_cov_3.196078_g76717_i0reverse_frame_3 - 0.015 15.1 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Na+ dependent nucleoside transporter C-terminus Nucleos_tra2_C PF07662.13 NODE_84658_length_188_cov_3.196078_g76717_i0reverse_frame_2 - 0.009 15.9 0.1 0.011 15.6 0.1 1.1 1 0 0 1 1 1 1 Na+ dependent nucleoside transporter C-terminus MRP_L53 PF10780.9 NODE_84652_length_188_cov_3.784314_g76711_i0reverse_frame_3 - 0.0031 17.6 0.0 0.0047 17.1 0.0 1.3 1 0 0 1 1 1 1 39S ribosomal protein L53/MRP-L53 YecM PF06185.12 NODE_84651_length_188_cov_3.928105_g76710_i0reverse_frame_2 - 3.1e-23 82.4 0.0 3.2e-23 82.3 0.0 1.0 1 0 0 1 1 1 1 YecM protein Fer4_2 PF12797.7 NODE_84650_length_188_cov_4.222222_g76709_i0reverse_frame_3 - 0.09 12.9 1.2 0.09 12.9 1.2 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Phage_glycop_gL PF11108.8 NODE_84650_length_188_cov_4.222222_g76709_i0forward_frame_2 - 0.1 12.6 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Viral glycoprotein L YMF19 PF02326.15 NODE_84648_length_188_cov_5.392157_g76707_i0forward_frame_3 - 0.033 15.0 1.2 0.036 14.8 1.2 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 AT_hook PF02178.19 NODE_84648_length_188_cov_5.392157_g76707_i0forward_frame_2 - 1.2 9.2 9.8 0.27 11.3 5.6 1.9 2 0 0 2 2 2 0 AT hook motif Folate_carrier PF01770.18 NODE_84647_length_188_cov_6.274510_g76706_i0forward_frame_2 - 0.0024 16.7 0.0 0.0025 16.6 0.0 1.0 1 0 0 1 1 1 1 Reduced folate carrier PurK_C PF17769.1 NODE_84646_length_188_cov_9.503268_g76705_i0forward_frame_3 - 0.1 12.3 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylaminoimidazole carboxylase C-terminal domain Zn_Tnp_IS1 PF03811.13 NODE_84646_length_188_cov_9.503268_g76705_i0forward_frame_2 - 0.035 13.8 0.2 0.057 13.1 0.2 1.4 1 0 0 1 1 1 0 InsA N-terminal domain NLPC_P60 PF00877.19 NODE_84643_length_188_cov_13.908497_g76702_i0forward_frame_3 - 0.052 13.6 0.3 0.06 13.4 0.3 1.1 1 0 0 1 1 1 0 NlpC/P60 family DUF4688 PF15752.5 NODE_84636_length_188_cov_23.411765_g76695_i0forward_frame_3 - 0.026 13.8 0.1 0.026 13.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4688) RNA_polI_A34 PF08208.11 NODE_84635_length_188_cov_24.235294_g76694_i0forward_frame_3 - 9.5 6.2 17.5 11 6.1 17.5 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Coilin_N PF15862.5 NODE_84635_length_188_cov_24.235294_g76694_i0forward_frame_3 - 9.8 6.0 8.8 11 5.8 8.8 1.1 1 0 0 1 1 1 0 Coilin N-terminus UL21a PF17636.2 NODE_84634_length_188_cov_24.875817_g76693_i0reverse_frame_3 - 0.42 10.6 4.1 0.47 10.5 4.1 1.1 1 0 0 1 1 1 0 Viral Unique Long protein 21a EBA-175_VI PF11556.8 NODE_84631_length_188_cov_26.666667_g76690_i0reverse_frame_3 - 0.00081 19.7 3.3 0.00091 19.5 3.3 1.0 1 0 0 1 1 1 1 Erythrocyte binding antigen 175 DUF2797 PF10977.8 NODE_84630_length_188_cov_28.026144_g76689_i0reverse_frame_3 - 8.6 6.2 11.3 9.3 6.1 11.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) Otopetrin PF03189.13 NODE_84629_length_188_cov_28.039216_g76688_i0reverse_frame_2 - 0.13 11.0 2.2 0.15 10.8 2.2 1.0 1 0 0 1 1 1 0 Otopetrin Fumarate_red_D PF02313.17 NODE_84628_length_188_cov_29.339869_g76687_i0forward_frame_2 - 0.045 13.8 0.2 0.054 13.6 0.2 1.1 1 0 0 1 1 1 0 Fumarate reductase subunit D TPR_8 PF13181.6 NODE_84627_length_188_cov_31.967320_g76686_i0reverse_frame_2 - 0.063 13.5 0.3 0.21 11.9 0.1 2.0 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_84627_length_188_cov_31.967320_g76686_i0reverse_frame_2 - 0.071 13.0 0.6 2.3 8.2 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF2677 PF10838.8 NODE_84626_length_188_cov_32.496732_g76685_i0reverse_frame_2 - 0.07 13.1 0.0 0.076 13.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2677) Nodulin_late PF07127.11 NODE_84626_length_188_cov_32.496732_g76685_i0forward_frame_3 - 0.1 13.0 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Late nodulin protein DUF884 PF05959.11 NODE_84624_length_188_cov_33.738562_g76683_i0reverse_frame_3 - 0.031 13.9 0.0 0.036 13.7 0.0 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF884) DEFB136 PF17333.2 NODE_84619_length_188_cov_35.392157_g76678_i0forward_frame_2 - 0.053 13.5 0.8 0.072 13.1 0.8 1.3 1 1 0 1 1 1 0 Beta defensin 136 Sbi-IV PF11621.8 NODE_84618_length_188_cov_35.601307_g76677_i0reverse_frame_2 - 0.039 14.3 1.5 0.1 12.9 0.5 1.9 1 1 1 2 2 2 0 C3 binding domain 4 of IgG-bind protein SBI DnaG_DnaB_bind PF08278.11 NODE_84618_length_188_cov_35.601307_g76677_i0reverse_frame_2 - 0.083 13.5 0.2 0.09 13.4 0.2 1.1 1 0 0 1 1 1 0 DNA primase DnaG DnaB-binding Cluap1 PF10234.9 NODE_84618_length_188_cov_35.601307_g76677_i0reverse_frame_2 - 0.1 12.0 3.2 0.098 12.0 3.2 1.0 1 0 0 1 1 1 0 Clusterin-associated protein-1 Psm4 PF17063.5 NODE_84618_length_188_cov_35.601307_g76677_i0forward_frame_2 - 0.064 13.8 0.6 0.11 13.1 0.6 1.4 1 0 0 1 1 1 0 Phenol-soluble modulin alpha 4 peptide D_CNTX PF17492.2 NODE_84616_length_188_cov_36.450980_g76675_i0forward_frame_3 - 0.01 16.0 2.0 0.014 15.5 2.0 1.3 1 0 0 1 1 1 0 Delta Ctenitoxins DICT PF10069.9 NODE_84615_length_188_cov_38.751634_g76674_i0forward_frame_3 - 0.13 12.0 0.1 0.15 11.9 0.1 1.0 1 0 0 1 1 1 0 Sensory domain in DIguanylate Cyclases and Two-component system Pex24p PF06398.11 NODE_84614_length_188_cov_39.816993_g76673_i0reverse_frame_2 - 1.6 7.6 3.9 1.6 7.6 3.9 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Thiolase_N PF00108.23 NODE_84612_length_188_cov_40.928105_g76671_i0reverse_frame_2 - 7e-19 68.2 0.1 7e-19 68.2 0.1 1.0 1 0 0 1 1 1 1 Thiolase, N-terminal domain KCNQ_channel PF03520.14 NODE_84610_length_188_cov_41.137255_g76669_i0reverse_frame_2 - 0.18 11.6 0.0 0.2 11.5 0.0 1.0 1 0 0 1 1 1 0 KCNQ voltage-gated potassium channel Prok-RING_4 PF14447.6 NODE_84610_length_188_cov_41.137255_g76669_i0forward_frame_3 - 0.032 14.1 0.3 0.055 13.3 0.3 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 DUF3948 PF13134.6 NODE_84610_length_188_cov_41.137255_g76669_i0forward_frame_2 - 0.17 11.6 0.2 0.25 11.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3948) ig PF00047.25 NODE_84609_length_188_cov_41.405229_g76668_i0reverse_frame_3 - 0.034 14.3 1.1 0.037 14.2 1.1 1.2 1 0 0 1 1 1 0 Immunoglobulin domain FUSC_2 PF13515.6 NODE_84607_length_188_cov_42.771242_g76666_i0forward_frame_3 - 0.011 15.8 1.8 0.012 15.7 1.8 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein-like Mon2_C PF16206.5 NODE_84604_length_188_cov_44.882353_g76663_i0reverse_frame_3 - 0.085 11.0 0.0 0.085 11.0 0.0 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein SPATA25 PF15218.6 NODE_84601_length_188_cov_49.000000_g76660_i0reverse_frame_2 - 0.074 12.8 0.2 0.079 12.7 0.2 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 25 Transp_Tc5_C PF04236.15 NODE_84589_length_188_cov_63.431373_g76648_i0forward_frame_3 - 0.048 14.0 1.1 0.048 14.0 1.1 1.6 1 1 0 2 2 2 0 Tc5 transposase C-terminal domain Lactamase_B_4 PF13691.6 NODE_84582_length_188_cov_73.392157_g76641_i0forward_frame_2 - 0.16 11.7 0.1 0.22 11.2 0.1 1.3 1 1 0 1 1 1 0 tRNase Z endonuclease Copper-fist PF00649.18 NODE_84581_length_188_cov_75.189542_g76640_i0forward_frame_3 - 0.14 11.7 3.9 5.4 6.6 0.1 2.2 2 0 0 2 2 2 0 Copper fist DNA binding domain Sel1 PF08238.12 NODE_84578_length_188_cov_84.130719_g76637_i0forward_frame_3 - 2.5e-08 34.3 1.4 3.8e-08 33.8 1.4 1.3 1 0 0 1 1 1 1 Sel1 repeat TPR_6 PF13174.6 NODE_84578_length_188_cov_84.130719_g76637_i0forward_frame_3 - 0.44 11.3 2.8 1.6 9.5 2.8 2.1 1 1 0 1 1 1 0 Tetratricopeptide repeat Herpes_UL73 PF03554.13 NODE_84574_length_188_cov_99.045752_g76633_i0forward_frame_2 - 0.24 11.4 4.7 0.26 11.3 4.7 1.1 1 0 0 1 1 1 0 UL73 viral envelope glycoprotein NRIP1_repr_2 PF15688.5 NODE_84570_length_188_cov_106.967320_g76629_i0reverse_frame_2 - 0.045 13.6 0.6 0.054 13.4 0.6 1.1 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 2 DUF2403 PF10290.9 NODE_84567_length_188_cov_107.941176_g76626_i0reverse_frame_2 - 0.13 12.7 0.7 0.16 12.4 0.7 1.2 1 0 0 1 1 1 0 Glycine-rich protein domain (DUF2403) Adipogenin PF15202.6 NODE_84567_length_188_cov_107.941176_g76626_i0forward_frame_3 - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Adipogenin DUF1999 PF09390.10 NODE_84565_length_188_cov_121.732026_g76624_i0reverse_frame_3 - 0.079 12.6 0.0 0.079 12.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1999) Bim_N PF06773.11 NODE_84563_length_188_cov_139.751634_g76622_i0reverse_frame_3 - 0.034 13.8 0.3 0.068 12.9 0.3 1.5 1 0 0 1 1 1 0 Bim protein N-terminus DUF1102 PF06510.11 NODE_84562_length_188_cov_140.679739_g76621_i0reverse_frame_2 - 0.14 12.3 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1102) Amnionless PF14828.6 NODE_84559_length_188_cov_145.947712_g76618_i0forward_frame_2 - 0.041 12.7 0.2 0.046 12.6 0.2 1.0 1 0 0 1 1 1 0 Amnionless DUF5391 PF17369.2 NODE_84552_length_188_cov_309.784314_g76611_i0forward_frame_2 - 0.0062 16.6 1.1 0.0071 16.4 1.1 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5391) SR-25 PF10500.9 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_3 - 0.01 15.4 7.6 0.011 15.4 7.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Med19 PF10278.9 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_3 - 0.3 11.0 10.3 0.34 10.8 10.3 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 TSGP1 PF07771.11 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_3 - 1.2 9.3 7.9 1.3 9.2 7.9 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 SR-25 PF10500.9 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_2 - 0.00064 19.4 10.6 0.0007 19.3 10.6 1.0 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein ETRAMP PF09716.10 NODE_84548_length_188_cov_448.464052_g76607_i0reverse_frame_2 - 0.064 13.3 5.8 0.082 13.0 5.8 1.2 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) SR-25 PF10500.9 NODE_84546_length_188_cov_588.660131_g76605_i0forward_frame_3 - 5.3 6.6 8.9 5.2 6.6 8.9 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CReP_N PF10472.9 NODE_84545_length_188_cov_790.372549_g76604_i0reverse_frame_2 - 0.17 10.7 1.6 0.19 10.5 1.6 1.0 1 0 0 1 1 1 0 eIF2-alpha phosphatase phosphorylation constitutive repressor LAT PF15234.6 NODE_84545_length_188_cov_790.372549_g76604_i0forward_frame_2 - 0.1 12.3 1.7 0.11 12.2 1.7 1.0 1 0 0 1 1 1 0 Linker for activation of T-cells DUF3169 PF11368.8 NODE_84543_length_188_cov_1746.581699_g76602_i0forward_frame_2 - 0.026 14.0 1.2 0.03 13.8 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) EBA-175_VI PF11556.8 NODE_84540_length_188_cov_59321.712418_g76599_i0forward_frame_2 - 0.015 15.6 2.0 0.018 15.4 2.0 1.1 1 0 0 1 1 1 0 Erythrocyte binding antigen 175 Peptidase_C1 PF00112.23 NODE_84539_length_188_cov_315117.019608_g76598_i0reverse_frame_3 - 1.2e-11 45.1 1.3 1.4e-11 44.9 1.3 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Lamprin PF06403.11 NODE_84538_length_189_cov_0.701299_g76597_i0reverse_frame_3 - 1.4 8.8 11.5 4.5 7.2 11.5 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_84538_length_189_cov_0.701299_g76597_i0reverse_frame_2 - 0.0014 18.6 3.9 0.0016 18.4 3.9 1.1 1 0 0 1 1 1 1 Lamprin Glug PF07581.12 NODE_84532_length_189_cov_0.896104_g76591_i0forward_frame_2 - 0.047 14.1 2.3 0.08 13.4 2.3 1.4 1 0 0 1 1 1 0 The GLUG motif Trp_leader1 PF08055.11 NODE_84529_length_189_cov_0.922078_g76588_i0forward_frame_2 - 0.027 14.1 2.5 0.047 13.4 2.5 1.4 1 0 0 1 1 1 0 Tryptophan leader peptide DZR PF12773.7 NODE_84519_length_189_cov_0.974026_g76578_i0reverse_frame_3 - 0.13 12.3 16.8 0.92 9.6 10.7 2.1 1 1 1 2 2 2 0 Double zinc ribbon DUF983 PF06170.12 NODE_84519_length_189_cov_0.974026_g76578_i0reverse_frame_3 - 0.64 10.5 0.0 0.64 10.5 0.0 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF983) Secapin PF17521.2 NODE_84519_length_189_cov_0.974026_g76578_i0reverse_frame_3 - 8 6.4 11.4 0.69 9.7 5.2 2.2 2 1 0 2 2 2 0 Honey bee peptides DUF4675 PF15720.5 NODE_84519_length_189_cov_0.974026_g76578_i0reverse_frame_2 - 2.2 8.0 14.6 2.4 7.9 14.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4675) GCK PF07802.11 NODE_84516_length_189_cov_0.987013_g76575_i0reverse_frame_2 - 0.13 12.7 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 GCK domain PG_isomerase_N PF18353.1 NODE_84514_length_189_cov_0.993506_g76573_i0forward_frame_3 - 0.019 15.3 0.0 0.024 15.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoglucose isomerase N-terminal domain UBA PF00627.31 NODE_84513_length_189_cov_0.993506_g76572_i0reverse_frame_2 - 0.0074 16.2 0.1 0.012 15.5 0.1 1.3 1 0 0 1 1 1 1 UBA/TS-N domain HOIP-UBA PF16678.5 NODE_84513_length_189_cov_0.993506_g76572_i0reverse_frame_2 - 0.017 15.1 0.6 0.017 15.1 0.6 1.1 1 0 0 1 1 1 0 HOIP UBA domain pair DUF1661 PF07877.11 NODE_84512_length_189_cov_1.000000_g76571_i0reverse_frame_2 - 0.049 13.3 0.5 0.083 12.6 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1661) Pns11_12 PF17464.2 NODE_84511_length_189_cov_1.012987_g76570_i0reverse_frame_2 - 0.22 11.2 2.0 0.22 11.2 2.0 1.0 1 0 0 1 1 1 0 Non-structural protein 11 and 12 MIP PF00230.20 NODE_84510_length_189_cov_1.012987_g76569_i0forward_frame_2 - 4.9e-06 26.4 5.6 5.1e-06 26.4 5.6 1.0 1 0 0 1 1 1 1 Major intrinsic protein VSG_B PF13206.6 NODE_84504_length_189_cov_1.025974_g76563_i0forward_frame_2 - 0.013 14.8 0.8 0.013 14.8 0.8 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain POC1 PF10450.9 NODE_84503_length_189_cov_1.025974_g76562_i0forward_frame_3 - 0.01 14.9 0.9 0.01 14.9 0.9 1.0 1 0 0 1 1 1 0 POC1 chaperone TAFH PF07531.14 NODE_84499_length_189_cov_1.025974_g76558_i0forward_frame_3 - 0.078 13.1 0.0 0.09 12.9 0.0 1.1 1 0 0 1 1 1 0 NHR1 homology to TAF Alpha_E3_glycop PF01563.16 NODE_84499_length_189_cov_1.025974_g76558_i0forward_frame_3 - 0.1 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Alphavirus E3 glycoprotein FBD PF08387.10 NODE_84498_length_189_cov_1.025974_g76557_i0reverse_frame_3 - 0.13 12.2 0.1 0.13 12.2 0.1 2.1 2 1 0 2 2 2 0 FBD DUF4018 PF13210.6 NODE_84498_length_189_cov_1.025974_g76557_i0forward_frame_3 - 0.013 15.3 0.8 0.014 15.1 0.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4018) Myb_DNA-binding PF00249.31 NODE_84493_length_189_cov_1.025974_g76552_i0forward_frame_3 - 0.18 12.0 1.2 4.3 7.6 0.2 2.2 1 1 1 2 2 2 0 Myb-like DNA-binding domain Mon2_C PF16206.5 NODE_84489_length_189_cov_1.032468_g76548_i0forward_frame_2 - 0.1 10.7 0.1 0.11 10.7 0.1 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein DUF2403 PF10290.9 NODE_84488_length_189_cov_1.032468_g76547_i0forward_frame_2 - 0.06 13.8 0.0 0.073 13.5 0.0 1.2 1 0 0 1 1 1 0 Glycine-rich protein domain (DUF2403) UNC-50 PF05216.13 NODE_84485_length_189_cov_1.032468_g76544_i0reverse_frame_2 - 0.06 12.9 2.8 0.065 12.8 2.8 1.1 1 0 0 1 1 1 0 UNC-50 family UL11 PF11094.8 NODE_84484_length_189_cov_1.032468_g76543_i0forward_frame_2 - 0.15 12.0 2.9 0.23 11.3 2.9 1.3 1 0 0 1 1 1 0 Membrane-associated tegument protein DUF3678 PF12435.8 NODE_84483_length_189_cov_1.032468_g76542_i0reverse_frame_3 - 0.023 14.1 0.1 0.033 13.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3678) EGF_MSP1_1 PF12946.7 NODE_84483_length_189_cov_1.032468_g76542_i0forward_frame_2 - 0.052 13.6 0.5 0.085 12.9 0.1 1.6 2 0 0 2 2 2 0 MSP1 EGF domain 1 Phage_30_8 PF06019.11 NODE_84481_length_189_cov_1.032468_g76540_i0reverse_frame_3 - 0.11 12.4 0.2 0.12 12.3 0.2 1.1 1 0 0 1 1 1 0 Phage GP30.8 protein VLPT PF07122.11 NODE_84479_length_189_cov_1.032468_g76538_i0forward_frame_2 - 0.39 10.5 0.3 0.39 10.5 0.3 2.2 2 1 0 2 2 2 0 Variable length PCR target protein (VLPT) Glyco_hydr_116N PF12215.8 NODE_84476_length_189_cov_1.032468_g76535_i0reverse_frame_3 - 0.11 11.9 0.2 0.11 12.0 0.2 1.0 1 0 0 1 1 1 0 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 2TM PF13239.6 NODE_84476_length_189_cov_1.032468_g76535_i0forward_frame_3 - 1.4 9.3 7.9 4.9 7.5 0.2 2.0 1 1 1 2 2 2 0 2TM domain DUF1590 PF07629.11 NODE_84475_length_189_cov_1.032468_g76534_i0forward_frame_2 - 0.86 9.5 6.6 0.22 11.3 1.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1590) EndIII_4Fe-2S PF10576.9 NODE_84474_length_189_cov_1.032468_g76533_i0reverse_frame_2 - 1.6 9.1 12.6 0.82 10.1 6.7 2.3 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III DUF1206 PF06724.11 NODE_84472_length_189_cov_1.038961_g76531_i0reverse_frame_3 - 0.012 15.6 0.4 0.015 15.4 0.4 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) Ca_hom_mod PF14798.6 NODE_84472_length_189_cov_1.038961_g76531_i0reverse_frame_3 - 0.031 13.4 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 Calcium homeostasis modulator DUF3915 PF13054.6 NODE_84472_length_189_cov_1.038961_g76531_i0reverse_frame_2 - 0.096 12.7 1.1 0.099 12.6 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Apis_Csd PF11671.8 NODE_84472_length_189_cov_1.038961_g76531_i0reverse_frame_2 - 0.82 9.7 3.3 0.93 9.5 3.3 1.1 1 0 0 1 1 1 0 Complementary sex determiner protein zf-P11 PF03854.14 NODE_84469_length_189_cov_1.038961_g76528_i0forward_frame_3 - 0.042 13.5 0.1 0.076 12.7 0.0 1.5 2 0 0 2 2 2 0 P-11 zinc finger Hyd_WA PF06462.12 NODE_84466_length_189_cov_1.038961_g76525_i0reverse_frame_2 - 0.065 13.2 0.6 0.093 12.8 0.6 1.2 1 0 0 1 1 1 0 Propeller SNCAIP_SNCA_bd PF16700.5 NODE_84463_length_189_cov_1.038961_g76522_i0forward_frame_3 - 0.028 14.2 0.0 0.044 13.5 0.0 1.3 1 0 0 1 1 1 0 Synphilin-1 alpha-Synuclein-binding domain TRAUB PF08164.12 NODE_84463_length_189_cov_1.038961_g76522_i0forward_frame_2 - 0.022 15.2 3.2 0.024 15.1 3.2 1.1 1 0 0 1 1 1 0 Apoptosis-antagonizing transcription factor, C-terminal DUF1891 PF09004.10 NODE_84461_length_189_cov_1.038961_g76520_i0reverse_frame_2 - 0.034 13.7 0.2 0.055 13.1 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1891) TMEM95 PF15203.6 NODE_84461_length_189_cov_1.038961_g76520_i0forward_frame_3 - 0.062 12.9 4.6 0.063 12.9 4.6 1.1 1 0 0 1 1 1 0 TMEM95 family Paired_CXXCH_1 PF09699.10 NODE_84455_length_189_cov_1.038961_g76514_i0reverse_frame_3 - 0.021 14.5 0.7 0.028 14.2 0.7 1.3 1 0 0 1 1 1 0 Doubled CXXCH motif (Paired_CXXCH_1) Pinin_SDK_memA PF04696.13 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 1.8 8.6 19.0 2.1 8.4 19.0 1.1 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region OmpH PF03938.14 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 5.9 7.2 20.5 7.3 6.9 20.5 1.0 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) SlyX PF04102.12 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 7 7.3 15.7 8.6 7.1 5.4 2.1 1 1 1 2 2 2 0 SlyX DUF5401 PF17380.2 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 7.9 4.4 16.8 8.6 4.3 16.8 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) GBP_C PF02841.14 NODE_84454_length_189_cov_1.038961_g76513_i0forward_frame_2 - 9.3 5.5 17.4 10 5.4 17.4 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain RuvB_C PF05491.13 NODE_84453_length_189_cov_1.038961_g76512_i0reverse_frame_2 - 0.059 13.2 0.0 0.078 12.9 0.0 1.1 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain Myticin-prepro PF10690.9 NODE_84452_length_189_cov_1.038961_g76511_i0reverse_frame_3 - 0.052 13.8 0.3 0.055 13.7 0.3 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Ntox3 PF15536.6 NODE_84452_length_189_cov_1.038961_g76511_i0forward_frame_2 - 0.044 13.8 0.0 0.047 13.7 0.0 1.1 1 0 0 1 1 1 0 Bacterial toxin 3 Y_Y_Y PF07495.13 NODE_84452_length_189_cov_1.038961_g76511_i0forward_frame_2 - 0.15 12.0 0.0 0.19 11.7 0.0 1.1 1 0 0 1 1 1 0 Y_Y_Y domain Antimicrobial17 PF08129.11 NODE_84450_length_189_cov_1.038961_g76509_i0forward_frame_2 - 0.14 12.2 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta enterocin family HlyD_2 PF12700.7 NODE_84449_length_189_cov_1.038961_g76508_i0reverse_frame_2 - 4.7 5.8 7.1 5 5.7 7.1 1.0 1 0 0 1 1 1 0 HlyD family secretion protein CXCR4_N PF12109.8 NODE_84435_length_189_cov_1.038961_g76494_i0forward_frame_3 - 0.089 13.0 4.7 0.12 12.6 4.7 1.2 1 0 0 1 1 1 0 CXCR4 Chemokine receptor N terminal DHC_N2 PF08393.13 NODE_84434_length_189_cov_1.038961_g76493_i0forward_frame_2 - 2.7e-05 23.5 0.0 2.7e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 ComZ PF10815.8 NODE_84432_length_189_cov_1.038961_g76491_i0forward_frame_3 - 0.2 11.7 0.0 0.27 11.3 0.0 1.1 1 0 0 1 1 1 0 ComZ DUF3973 PF13119.6 NODE_84432_length_189_cov_1.038961_g76491_i0forward_frame_2 - 0.097 12.8 0.2 0.15 12.2 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) DUF2929 PF11151.8 NODE_84428_length_189_cov_1.038961_g76487_i0reverse_frame_2 - 0.013 15.8 0.6 0.017 15.4 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2929) DUF1296 PF06972.11 NODE_84428_length_189_cov_1.038961_g76487_i0forward_frame_3 - 0.0052 16.9 0.2 0.05 13.7 0.2 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF1296) YhfZ_C PF14503.6 NODE_84428_length_189_cov_1.038961_g76487_i0forward_frame_3 - 0.0075 15.8 0.6 0.0081 15.7 0.6 1.1 1 0 0 1 1 1 1 YhfZ C-terminal domain zf-RING_UBOX PF13445.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 4.1e-08 33.1 10.3 4.2e-07 29.9 7.2 2.1 1 1 1 2 2 2 2 RING-type zinc-finger Prok-RING_4 PF14447.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 7.2e-07 29.0 3.0 7.2e-07 29.0 3.0 2.1 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 4.3e-06 27.0 10.1 9.5e-06 25.9 10.3 1.4 1 1 1 2 2 2 2 Ring finger domain zf-C3HC4 PF00097.25 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 9.9e-05 22.1 10.9 0.00027 20.8 11.2 1.6 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 0.00023 21.0 13.6 0.00062 19.7 13.7 1.6 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 0.00062 19.6 13.9 0.002 18.0 11.4 2.0 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 0.0026 17.6 12.6 0.0026 17.6 12.6 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 0.0034 17.1 1.3 0.0034 17.1 1.3 2.5 2 1 0 2 2 2 1 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 0.021 15.0 16.7 0.035 14.3 14.8 2.3 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_11 PF17123.5 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 0.43 10.4 9.7 1.6 8.6 0.1 3.0 2 1 1 3 3 3 0 RING-like zinc finger zf-H2C2_2 PF13465.6 NODE_84426_length_189_cov_1.038961_g76485_i0reverse_frame_3 - 2.9 8.5 0.1 2.9 8.5 0.1 2.9 3 1 0 3 3 3 0 Zinc-finger double domain Lambda_CIII PF02061.16 NODE_84424_length_189_cov_1.038961_g76483_i0reverse_frame_2 - 0.067 13.3 0.4 0.1 12.7 0.4 1.4 1 1 0 1 1 1 0 Lambda Phage CIII PhoR PF11808.8 NODE_84424_length_189_cov_1.038961_g76483_i0forward_frame_3 - 0.037 14.4 0.2 0.057 13.8 0.2 1.4 1 1 0 1 1 1 0 Phosphate regulon sensor protein PhoR DUF4975 PF16346.5 NODE_84423_length_189_cov_1.038961_g76482_i0forward_frame_3 - 0.019 15.0 0.8 0.019 15.0 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4975) MutS_IV PF05190.18 NODE_84421_length_189_cov_1.038961_g76480_i0reverse_frame_2 - 0.16 12.4 0.0 0.23 11.8 0.0 1.4 1 1 0 1 1 1 0 MutS family domain IV Zn_ribbon_SprT PF17283.2 NODE_84418_length_189_cov_1.038961_g76477_i0forward_frame_3 - 0.22 11.5 4.4 1.9 8.5 0.5 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain DUF3772 PF12607.8 NODE_84416_length_189_cov_1.038961_g76475_i0reverse_frame_3 - 0.034 13.9 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) IF3_C PF00707.22 NODE_84411_length_189_cov_1.097403_g76470_i0reverse_frame_3 - 1.9e-06 27.7 0.2 2e-06 27.7 0.2 1.0 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain DUF2001 PF09393.10 NODE_84411_length_189_cov_1.097403_g76470_i0reverse_frame_3 - 0.025 14.6 0.1 0.025 14.6 0.1 1.0 1 0 0 1 1 1 0 Phage tail tube protein HMG_CoA_synt_N PF01154.17 NODE_84407_length_189_cov_1.110390_g76466_i0reverse_frame_2 - 0.086 12.7 0.0 0.09 12.6 0.0 1.0 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A synthase N terminal Dicty_CTDC PF00526.18 NODE_84401_length_189_cov_1.136364_g76460_i0reverse_frame_2 - 0.11 12.4 0.6 0.2 11.6 0.6 1.4 1 0 0 1 1 1 0 Dictyostelium (slime mold) repeat PGK PF00162.19 NODE_84401_length_189_cov_1.136364_g76460_i0forward_frame_2 - 0.01 14.8 0.0 0.011 14.8 0.0 1.0 1 0 0 1 1 1 0 Phosphoglycerate kinase DUF3788 PF12663.7 NODE_84400_length_189_cov_1.136364_g76459_i0forward_frame_2 - 0.0061 16.5 0.1 0.0062 16.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3788) DUF1564 PF07600.11 NODE_84400_length_189_cov_1.136364_g76459_i0forward_frame_2 - 0.015 15.0 0.6 0.015 15.0 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1564) Izumo-Ig PF16706.5 NODE_84397_length_189_cov_1.142857_g76456_i0forward_frame_3 - 0.048 13.7 0.0 0.066 13.3 0.0 1.2 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain Phospholamban PF04272.14 NODE_84388_length_189_cov_1.181818_g76447_i0forward_frame_3 - 0.045 13.2 1.8 0.061 12.8 1.8 1.3 1 0 0 1 1 1 0 Phospholamban DHHC PF01529.20 NODE_84388_length_189_cov_1.181818_g76447_i0forward_frame_3 - 1.4 9.0 7.2 1.5 8.9 7.2 1.0 1 0 0 1 1 1 0 DHHC palmitoyltransferase TRF PF08558.10 NODE_84387_length_189_cov_1.181818_g76446_i0reverse_frame_2 - 0.29 10.7 0.0 0.33 10.5 0.0 1.0 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) Cyclotide PF03784.13 NODE_84384_length_189_cov_1.194805_g76443_i0reverse_frame_3 - 0.023 14.8 6.0 0.023 14.8 6.0 1.9 2 0 0 2 2 2 0 Cyclotide family DUF4571 PF15137.6 NODE_84384_length_189_cov_1.194805_g76443_i0forward_frame_2 - 0.19 11.3 1.3 0.2 11.3 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4571) BTK PF00779.19 NODE_84382_length_189_cov_1.201299_g76441_i0forward_frame_2 - 1.4 8.8 8.4 3.1 7.7 0.4 2.4 2 0 0 2 2 2 0 BTK motif DRE2_N PF16803.5 NODE_84379_length_189_cov_1.207792_g76438_i0reverse_frame_2 - 0.21 11.8 0.0 0.23 11.7 0.0 1.1 1 0 0 1 1 1 0 Fe-S cluster assembly protein DRE2 N-terminus MEIOC PF15189.6 NODE_84378_length_189_cov_1.214286_g76437_i0reverse_frame_3 - 0.054 13.1 0.0 0.054 13.1 0.0 1.1 1 0 0 1 1 1 0 Meiosis-specific coiled-coil domain-containing protein MEIOC DUF3836 PF12930.7 NODE_84377_length_189_cov_1.214286_g76436_i0forward_frame_2 - 0.03 14.1 0.0 0.035 13.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF3836) Radical_SAM PF04055.21 NODE_84377_length_189_cov_1.214286_g76436_i0forward_frame_2 - 0.061 13.7 2.9 0.072 13.5 2.9 1.1 1 0 0 1 1 1 0 Radical SAM superfamily Vps54 PF07928.12 NODE_84372_length_189_cov_1.227273_g76431_i0forward_frame_2 - 0.04 14.3 2.3 0.048 14.1 2.1 1.2 1 1 0 1 1 1 0 Vps54-like protein Get5_C PF18514.1 NODE_84368_length_189_cov_1.233766_g76427_i0reverse_frame_3 - 0.084 12.6 0.2 3.5 7.4 0.1 2.1 2 0 0 2 2 2 0 Get5 C-terminal domain FeoB_associated PF12669.7 NODE_84364_length_189_cov_1.266234_g76423_i0reverse_frame_2 - 0.045 14.2 0.1 0.057 13.8 0.1 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Corona_nucleoca PF00937.18 NODE_84362_length_189_cov_1.272727_g76421_i0forward_frame_3 - 0.3 10.1 3.1 0.32 10.0 3.1 1.1 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein PKS_DE PF18369.1 NODE_84359_length_189_cov_1.279221_g76418_i0forward_frame_2 - 0.031 14.8 0.0 0.042 14.4 0.0 1.2 1 0 0 1 1 1 0 Polyketide synthase dimerisation element domain DrrA_P4M PF14860.6 NODE_84357_length_189_cov_1.292208_g76416_i0reverse_frame_2 - 0.012 15.4 0.1 0.015 15.1 0.1 1.1 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain Trm5_N PF18093.1 NODE_84355_length_189_cov_1.292208_g76414_i0reverse_frame_2 - 0.0062 16.4 0.0 0.0093 15.8 0.0 1.3 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain Adenine_glyco PF03352.13 NODE_84355_length_189_cov_1.292208_g76414_i0reverse_frame_2 - 0.13 12.0 0.1 0.14 11.9 0.1 1.0 1 0 0 1 1 1 0 Methyladenine glycosylase LSPR PF06049.12 NODE_84348_length_189_cov_1.298701_g76407_i0reverse_frame_2 - 0.17 11.8 3.9 0.5 10.4 0.2 3.0 2 0 0 2 2 2 0 Coagulation Factor V LSPD Repeat DEAD_2 PF06733.15 NODE_84346_length_189_cov_1.298701_g76405_i0forward_frame_2 - 1.7e-10 40.8 0.0 2.3e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 DEAD_2 DUF3866 PF12982.7 NODE_84346_length_189_cov_1.298701_g76405_i0forward_frame_2 - 0.12 11.4 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3866) DUF3420 PF11900.8 NODE_84343_length_189_cov_1.298701_g76402_i0forward_frame_3 - 0.039 14.1 0.2 0.07 13.3 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3420) DUF678 PF05077.12 NODE_84342_length_189_cov_1.298701_g76401_i0forward_frame_2 - 0.083 13.0 1.8 0.096 12.8 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF678) AbLIM_anchor PF16182.5 NODE_84339_length_189_cov_1.298701_g76398_i0reverse_frame_2 - 0.18 11.6 0.0 0.21 11.4 0.0 1.0 1 0 0 1 1 1 0 Putative adherens-junction anchoring region of AbLIM Frag1 PF10277.9 NODE_84338_length_189_cov_1.298701_g76397_i0forward_frame_3 - 0.058 12.9 3.4 0.063 12.8 3.4 1.0 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family MRAP PF15183.6 NODE_84338_length_189_cov_1.298701_g76397_i0forward_frame_3 - 1.8 8.6 6.3 1.9 8.5 6.3 1.2 1 1 0 1 1 1 0 Melanocortin-2 receptor accessory protein family PurL_C PF16904.5 NODE_84335_length_189_cov_1.298701_g76394_i0reverse_frame_2 - 0.071 13.4 0.2 0.073 13.4 0.2 1.0 1 0 0 1 1 1 0 Phosphoribosylformylglycinamidine synthase II C-terminus DUF4715 PF15835.5 NODE_84333_length_189_cov_1.305195_g76392_i0reverse_frame_2 - 0.15 12.1 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4715) VPS38 PF17649.1 NODE_84328_length_189_cov_1.350649_g76387_i0reverse_frame_3 - 0.098 11.5 0.5 0.11 11.4 0.5 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting 38 ABA_GPCR PF12430.8 NODE_84328_length_189_cov_1.350649_g76387_i0forward_frame_3 - 0.0096 15.7 0.1 0.0098 15.7 0.1 1.1 1 0 0 1 1 1 1 Abscisic acid G-protein coupled receptor UvrD_C_2 PF13538.6 NODE_84327_length_189_cov_1.357143_g76386_i0forward_frame_2 - 0.002 17.9 0.1 0.0059 16.4 0.1 1.8 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 NODE_84327_length_189_cov_1.357143_g76386_i0forward_frame_2 - 0.024 14.4 0.0 0.028 14.2 0.0 1.1 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase TPR_12 PF13424.6 NODE_84326_length_189_cov_1.363636_g76385_i0reverse_frame_3 - 5.3e-07 29.8 0.8 7.2e-07 29.4 0.8 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_84326_length_189_cov_1.363636_g76385_i0reverse_frame_3 - 0.00049 20.0 4.2 0.00063 19.7 4.2 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_84326_length_189_cov_1.363636_g76385_i0reverse_frame_3 - 0.0012 18.6 5.5 0.0016 18.2 5.5 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_84326_length_189_cov_1.363636_g76385_i0reverse_frame_3 - 0.009 16.0 0.8 0.012 15.6 0.8 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_84326_length_189_cov_1.363636_g76385_i0reverse_frame_3 - 0.026 14.7 3.8 0.039 14.2 3.8 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_84326_length_189_cov_1.363636_g76385_i0reverse_frame_3 - 0.033 14.0 0.3 0.06 13.2 0.3 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4507 PF14964.6 NODE_84326_length_189_cov_1.363636_g76385_i0forward_frame_2 - 0.085 11.8 0.4 0.084 11.8 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4507) DUF2884 PF11101.8 NODE_84325_length_189_cov_1.363636_g76384_i0forward_frame_2 - 4.1e-07 29.7 0.0 4.2e-07 29.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2884) NB-ARC PF00931.22 NODE_84325_length_189_cov_1.363636_g76384_i0forward_frame_2 - 0.018 14.2 0.0 0.019 14.1 0.0 1.0 1 0 0 1 1 1 0 NB-ARC domain TetR_C_12 PF16914.5 NODE_84322_length_189_cov_1.383117_g76381_i0forward_frame_2 - 0.0056 16.8 0.0 0.0066 16.6 0.0 1.1 1 0 0 1 1 1 1 Bacterial transcriptional repressor C-terminal DUF748 PF05359.11 NODE_84320_length_189_cov_1.389610_g76379_i0reverse_frame_3 - 0.062 13.5 0.0 0.072 13.3 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF748) DUF5520 PF17658.1 NODE_84317_length_189_cov_1.422078_g76376_i0reverse_frame_2 - 0.068 12.3 0.0 0.075 12.1 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5520) Ery_res_leader1 PF08051.11 NODE_84316_length_189_cov_1.422078_g76375_i0reverse_frame_2 - 0.072 13.1 0.3 0.27 11.4 0.0 2.2 2 0 0 2 2 2 0 Erythromycin resistance leader peptide TTc_toxin_rep PF18807.1 NODE_84316_length_189_cov_1.422078_g76375_i0forward_frame_3 - 0.085 12.7 1.4 0.48 10.3 0.1 2.3 2 1 0 2 2 2 0 Tripartite Tc toxins repeat UPF0139 PF03669.13 NODE_84315_length_189_cov_1.422078_g76374_i0forward_frame_3 - 0.23 11.4 3.7 0.26 11.2 3.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) RFX5_DNA_bdg PF14621.6 NODE_84314_length_189_cov_1.428571_g76373_i0reverse_frame_2 - 0.22 11.3 2.0 0.24 11.2 2.0 1.0 1 0 0 1 1 1 0 RFX5 DNA-binding domain Peptidase_C1 PF00112.23 NODE_84314_length_189_cov_1.428571_g76373_i0forward_frame_3 - 0.078 13.1 0.3 0.078 13.1 0.3 1.1 1 0 0 1 1 1 0 Papain family cysteine protease DCR PF14047.6 NODE_84309_length_189_cov_1.454545_g76368_i0reverse_frame_3 - 0.021 15.0 0.6 0.029 14.6 0.6 1.2 1 0 0 1 1 1 0 Dppa2/4 conserved region Ion_trans PF00520.31 NODE_84307_length_189_cov_1.461039_g76366_i0reverse_frame_2 - 1.2e-05 24.6 0.1 1.2e-05 24.6 0.1 1.1 1 0 0 1 1 1 1 Ion transport protein Histidinol_dh PF00815.20 NODE_84306_length_189_cov_1.467532_g76365_i0forward_frame_3 - 2.2e-21 76.4 0.2 2.3e-21 76.3 0.2 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase DUF1614 PF07758.11 NODE_84306_length_189_cov_1.467532_g76365_i0forward_frame_3 - 0.069 13.1 0.1 0.074 13.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1614) TrbI_Ftype PF09677.10 NODE_84305_length_189_cov_1.487013_g76364_i0reverse_frame_2 - 0.11 12.9 0.2 0.12 12.6 0.2 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) DUF4266 PF14086.6 NODE_84305_length_189_cov_1.487013_g76364_i0reverse_frame_2 - 0.37 11.8 2.3 8.9 7.4 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4266) Ureide_permease PF07168.11 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 0.26 10.0 5.4 0.28 9.9 5.4 1.0 1 0 0 1 1 1 0 Ureide permease FAM176 PF14851.6 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 1.9 8.1 6.6 2.1 8.0 6.6 1.1 1 0 0 1 1 1 0 FAM176 family Spt20 PF12090.8 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 4 7.0 22.4 3.8 7.0 22.4 1.0 1 0 0 1 1 1 0 Spt20 family DUF3464 PF11947.8 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 5.5 6.7 8.8 6.1 6.6 8.8 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 DUF4834 PF16118.5 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_3 - 8 7.5 12.7 8.9 7.4 12.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) vMSA PF00695.19 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_2 - 0.17 11.0 3.0 0.17 11.0 3.0 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Mucin PF01456.17 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_2 - 0.39 10.7 15.1 0.4 10.7 15.1 1.0 1 0 0 1 1 1 0 Mucin-like glycoprotein Tir_receptor_C PF07489.11 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_2 - 1.1 9.2 8.9 1.3 9.0 8.9 1.1 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) C-terminus MGC-24 PF05283.11 NODE_84300_length_189_cov_1.500000_g76359_i0reverse_frame_2 - 6.4 7.2 8.5 7.1 7.1 8.5 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF2093 PF09866.9 NODE_84299_length_189_cov_1.500000_g76358_i0forward_frame_3 - 0.33 10.4 1.7 12 5.4 0.3 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2093) lci PF12197.8 NODE_84295_length_189_cov_1.525974_g76354_i0forward_frame_3 - 0.095 12.5 0.3 0.13 12.1 0.3 1.1 1 0 0 1 1 1 0 Bacillus cereus group antimicrobial protein DUF5388 PF17363.2 NODE_84293_length_189_cov_1.525974_g76352_i0forward_frame_2 - 0.061 13.5 0.2 0.075 13.2 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5388) Form-deh_trans PF09163.11 NODE_84290_length_189_cov_1.532468_g76349_i0forward_frame_2 - 0.13 12.1 0.1 0.22 11.3 0.0 1.5 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Sipho_Gp157 PF05565.11 NODE_84289_length_189_cov_1.538961_g76348_i0forward_frame_3 - 0.054 13.5 0.6 0.066 13.2 0.6 1.1 1 0 0 1 1 1 0 Siphovirus Gp157 Rtt106 PF08512.12 NODE_84288_length_189_cov_1.538961_g76347_i0reverse_frame_2 - 0.028 14.8 0.1 0.031 14.7 0.1 1.1 1 0 0 1 1 1 0 Histone chaperone Rttp106-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks443.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks443.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks443.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks443.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:47:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SAC3_GANP PF03399.16 NODE_84284_length_189_cov_1.545455_g76343_i0forward_frame_3 - 0.077 12.4 0.2 0.078 12.4 0.2 1.0 1 0 0 1 1 1 0 SAC3/GANP family VF530 PF09905.9 NODE_84276_length_189_cov_1.551948_g76335_i0reverse_frame_3 - 0.036 14.3 0.3 0.046 13.9 0.3 1.3 1 0 0 1 1 1 0 DNA-binding protein VF530 GTP_cyclohydroI PF01227.22 NODE_84276_length_189_cov_1.551948_g76335_i0forward_frame_3 - 0.032 13.7 0.1 0.032 13.7 0.1 1.0 1 0 0 1 1 1 0 GTP cyclohydrolase I SUZ-C PF12901.7 NODE_84270_length_189_cov_1.558442_g76329_i0reverse_frame_2 - 0.046 13.7 0.1 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 SUZ-C motif V_ATPase_I PF01496.19 NODE_84254_length_189_cov_1.571429_g76313_i0reverse_frame_3 - 5.6e-06 24.6 0.0 5.6e-06 24.6 0.0 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family ITAM_Cys-rich PF10538.9 NODE_84254_length_189_cov_1.571429_g76313_i0reverse_frame_3 - 0.014 15.2 0.0 0.019 14.7 0.0 1.3 1 0 0 1 1 1 0 Immunoreceptor tyrosine-based activation motif EutK_C PF16365.5 NODE_84253_length_189_cov_1.584416_g76312_i0reverse_frame_2 - 0.12 12.5 0.1 0.16 12.0 0.1 1.3 1 1 0 1 1 1 0 Ethanolamine utilization protein EutK C-terminus Endonuclease_7 PF02945.15 NODE_84250_length_189_cov_1.590909_g76309_i0reverse_frame_3 - 0.011 15.7 3.0 0.011 15.6 3.0 1.1 1 0 0 1 1 1 0 Recombination endonuclease VII Glucos_trans_II PF14264.6 NODE_84249_length_189_cov_1.590909_g76308_i0reverse_frame_2 - 0.042 13.2 5.8 0.043 13.2 5.8 1.1 1 0 0 1 1 1 0 Glucosyl transferase GtrII DUF3290 PF11694.8 NODE_84247_length_189_cov_1.597403_g76306_i0reverse_frame_2 - 0.1 12.6 5.9 0.11 12.4 5.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) Presenilin PF01080.17 NODE_84247_length_189_cov_1.597403_g76306_i0reverse_frame_2 - 1.7 7.3 8.4 1.9 7.2 8.4 1.0 1 0 0 1 1 1 0 Presenilin CutC PF03932.14 NODE_84243_length_189_cov_1.623377_g76302_i0reverse_frame_3 - 1.2e-15 57.6 0.2 1.3e-15 57.5 0.2 1.0 1 0 0 1 1 1 1 CutC family C6_DPF PF10170.9 NODE_84241_length_189_cov_1.629870_g76300_i0forward_frame_3 - 0.095 13.1 0.2 0.13 12.6 0.2 1.2 1 0 0 1 1 1 0 Cysteine-rich domain gerPA PF10676.9 NODE_84238_length_189_cov_1.649351_g76297_i0reverse_frame_2 - 0.11 12.8 0.2 0.12 12.7 0.2 1.2 1 0 0 1 1 1 0 Spore germination protein gerPA/gerPF Nucleoside_tran PF01733.18 NODE_84237_length_189_cov_1.649351_g76296_i0reverse_frame_3 - 0.026 13.9 0.2 0.027 13.9 0.2 1.0 1 0 0 1 1 1 0 Nucleoside transporter zf-LITAF-like PF10601.9 NODE_84234_length_189_cov_1.662338_g76293_i0forward_frame_3 - 0.031 14.5 0.4 0.031 14.5 0.4 1.5 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain CCSMST1 PF15013.6 NODE_84234_length_189_cov_1.662338_g76293_i0forward_frame_2 - 2.4 8.4 4.6 1.4 9.2 3.2 1.4 1 1 0 1 1 1 0 CCSMST1 family WBP-1 PF11669.8 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.0025 18.4 3.7 0.0028 18.3 3.7 1.1 1 0 0 1 1 1 1 WW domain-binding protein 1 MRAP PF15183.6 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.016 15.1 0.2 0.018 14.9 0.2 1.1 1 0 0 1 1 1 0 Melanocortin-2 receptor accessory protein family Orf78 PF06024.12 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.043 14.1 0.4 0.047 14.0 0.4 1.1 1 0 0 1 1 1 0 Orf78 (ac78) TMEM154 PF15102.6 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.047 13.6 1.2 0.052 13.4 1.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Orthoreo_P10 PF07204.11 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.13 12.2 4.1 0.16 11.9 4.1 1.3 1 1 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 TMEM108 PF15759.5 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.19 10.7 1.3 0.21 10.5 1.3 1.0 1 0 0 1 1 1 0 TMEM108 family CCSMST1 PF15013.6 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.27 11.4 1.5 0.32 11.2 1.5 1.4 1 1 0 1 1 1 0 CCSMST1 family TMEM52 PF14979.6 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.32 10.9 4.7 0.34 10.8 4.7 1.1 1 0 0 1 1 1 0 Transmembrane 52 DUF4750 PF15938.5 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.38 10.4 7.3 0.52 10.0 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4750) EphA2_TM PF14575.6 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 0.54 11.2 2.2 0.74 10.7 2.2 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF3149 PF11346.8 NODE_84230_length_189_cov_1.694805_g76289_i0reverse_frame_2 - 2.3 7.9 7.1 3.5 7.3 7.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) HOK_GEF PF01848.16 NODE_84228_length_189_cov_1.727273_g76287_i0reverse_frame_3 - 3.2 7.3 8.3 1 8.8 0.3 2.2 2 0 0 2 2 2 0 Hok/gef family KIX PF02172.16 NODE_84228_length_189_cov_1.727273_g76287_i0forward_frame_2 - 0.0011 19.2 1.5 0.0013 19.0 1.5 1.1 1 0 0 1 1 1 1 KIX domain YqeY PF09424.10 NODE_84228_length_189_cov_1.727273_g76287_i0forward_frame_2 - 0.011 15.8 2.0 0.011 15.8 2.0 1.1 1 0 0 1 1 1 0 Yqey-like protein Cytochrom_C PF00034.21 NODE_84225_length_189_cov_1.746753_g76284_i0reverse_frame_2 - 0.015 16.4 0.3 0.017 16.3 0.3 1.1 1 0 0 1 1 1 0 Cytochrome c Cytochrome_CBB3 PF13442.6 NODE_84225_length_189_cov_1.746753_g76284_i0reverse_frame_2 - 0.055 13.8 0.2 0.057 13.8 0.2 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III MRF_C2 PF13888.6 NODE_84224_length_189_cov_1.753247_g76283_i0reverse_frame_2 - 0.062 13.2 0.0 0.068 13.1 0.0 1.0 1 0 0 1 1 1 0 Myelin gene regulatory factor C-terminal domain 2 Ion_trans PF00520.31 NODE_84222_length_189_cov_1.759740_g76281_i0forward_frame_2 - 0.006 15.8 1.7 0.0062 15.8 1.7 1.0 1 0 0 1 1 1 1 Ion transport protein Kelch_5 PF13854.6 NODE_84218_length_189_cov_1.798701_g76277_i0reverse_frame_2 - 0.012 15.6 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Kelch motif zf-Tim10_DDP PF02953.15 NODE_84217_length_189_cov_1.805195_g76276_i0forward_frame_3 - 0.098 12.3 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 Tim10/DDP family zinc finger DUF4118 PF13493.6 NODE_84216_length_189_cov_1.805195_g76275_i0reverse_frame_2 - 0.15 11.8 2.9 0.18 11.6 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) Toprim_C_rpt PF13368.6 NODE_84215_length_189_cov_1.805195_g76274_i0forward_frame_2 - 0.071 13.1 0.0 0.086 12.8 0.0 1.2 1 0 0 1 1 1 0 Topoisomerase C-terminal repeat MBDa PF16564.5 NODE_84213_length_189_cov_1.811688_g76272_i0reverse_frame_3 - 0.16 12.1 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 p55-binding region of Methyl-CpG-binding domain proteins MBD DUF948 PF06103.11 NODE_84212_length_189_cov_1.811688_g76271_i0reverse_frame_2 - 0.064 13.5 0.5 0.073 13.3 0.5 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) LAGLIDADG_3 PF14528.6 NODE_84211_length_189_cov_1.818182_g76270_i0forward_frame_2 - 0.032 14.5 0.0 0.044 14.1 0.0 1.2 1 0 0 1 1 1 0 LAGLIDADG-like domain Bact_transglu_N PF08379.10 NODE_84208_length_189_cov_1.824675_g76267_i0reverse_frame_2 - 0.044 14.7 0.0 0.052 14.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial transglutaminase-like N-terminal region Crisp PF08562.10 NODE_84206_length_189_cov_1.837662_g76265_i0reverse_frame_3 - 0.36 11.4 11.2 0.52 10.9 11.2 1.4 1 1 0 1 1 1 0 Crisp Phtf-FEM1B_bdg PF12129.8 NODE_84206_length_189_cov_1.837662_g76265_i0forward_frame_2 - 0.09 12.6 0.8 0.09 12.6 0.8 1.0 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor DUF3637 PF12337.8 NODE_84204_length_189_cov_1.863636_g76263_i0reverse_frame_3 - 0.035 14.4 0.0 0.059 13.7 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3637) COX7B PF05392.11 NODE_84204_length_189_cov_1.863636_g76263_i0reverse_frame_3 - 0.15 11.7 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase chain VIIB DUF3953 PF13129.6 NODE_84203_length_189_cov_1.876623_g76262_i0forward_frame_3 - 0.0023 17.6 5.5 0.0036 17.0 5.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3953) p450 PF00067.22 NODE_84202_length_189_cov_1.876623_g76261_i0forward_frame_3 - 3.9e-10 39.1 0.0 4e-10 39.1 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 ExoD PF06055.12 NODE_84198_length_189_cov_1.909091_g76257_i0reverse_frame_3 - 0.022 14.2 2.6 0.025 13.9 2.6 1.0 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD DUF4726 PF15855.5 NODE_84194_length_189_cov_1.922078_g76253_i0forward_frame_2 - 0.086 13.1 0.0 0.091 13.0 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) HTH_Tnp_Tc3_2 PF01498.18 NODE_84193_length_189_cov_1.922078_g76252_i0reverse_frame_2 - 0.016 15.4 0.2 0.023 14.9 0.2 1.3 1 0 0 1 1 1 0 Transposase Extensin_1 PF02095.15 NODE_84187_length_189_cov_1.967532_g76246_i0reverse_frame_2 - 0.52 10.6 11.6 0.97 9.8 2.0 2.5 2 0 0 2 2 2 0 Extensin-like protein repeat PD40 PF07676.12 NODE_84185_length_189_cov_1.980519_g76244_i0reverse_frame_3 - 0.0043 16.9 0.1 0.012 15.5 0.1 1.8 2 0 0 2 2 2 1 WD40-like Beta Propeller Repeat Dopey_N PF04118.14 NODE_84183_length_189_cov_1.993506_g76242_i0reverse_frame_2 - 0.081 12.0 0.3 0.092 11.8 0.3 1.0 1 0 0 1 1 1 0 Dopey, N-terminal Mon1 PF03164.14 NODE_84182_length_189_cov_2.006494_g76241_i0forward_frame_3 - 0.018 14.1 0.1 0.019 14.0 0.1 1.0 1 0 0 1 1 1 0 Trafficking protein Mon1 Ribosomal_S5_C PF03719.15 NODE_84178_length_189_cov_2.045455_g76237_i0reverse_frame_3 - 0.12 11.8 0.1 5.1 6.6 0.0 2.1 2 0 0 2 2 2 0 Ribosomal protein S5, C-terminal domain TMEM95 PF15203.6 NODE_84166_length_189_cov_2.071429_g76225_i0reverse_frame_2 - 0.056 13.1 0.4 0.057 13.1 0.4 1.1 1 0 0 1 1 1 0 TMEM95 family 2C_adapt PF08793.10 NODE_84165_length_189_cov_2.071429_g76224_i0reverse_frame_3 - 0.081 13.1 1.6 0.13 12.5 1.6 1.3 1 0 0 1 1 1 0 2-cysteine adaptor domain IgaA PF07095.11 NODE_84162_length_189_cov_2.077922_g76221_i0forward_frame_3 - 0.094 10.7 1.0 0.1 10.6 1.0 1.0 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA Arm-DNA-bind_1 PF09003.10 NODE_84152_length_189_cov_2.175325_g76211_i0reverse_frame_2 - 0.047 13.8 0.0 0.055 13.6 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage lambda integrase, Arm DNA-binding domain Pkinase PF00069.25 NODE_84150_length_189_cov_2.181818_g76209_i0forward_frame_2 - 5.6e-09 35.8 0.0 5.6e-09 35.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_84150_length_189_cov_2.181818_g76209_i0forward_frame_2 - 1.4e-07 31.1 0.0 1.4e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase CTU2 PF10288.9 NODE_84149_length_189_cov_2.188312_g76208_i0reverse_frame_3 - 0.017 15.3 0.4 0.019 15.2 0.4 1.1 1 0 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 AdoMet_MTase PF07757.13 NODE_84149_length_189_cov_2.188312_g76208_i0forward_frame_2 - 0.077 13.3 0.1 0.089 13.1 0.1 1.1 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase Tachystatin_A PF11406.8 NODE_84146_length_189_cov_2.207792_g76205_i0reverse_frame_2 - 0.011 15.8 6.1 0.018 15.1 6.1 1.4 1 1 0 1 1 1 0 Antimicrobial peptide tachystatin A PPDK_N PF01326.19 NODE_84146_length_189_cov_2.207792_g76205_i0forward_frame_2 - 4.5e-12 45.9 0.0 5.1e-12 45.7 0.0 1.0 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Transp_inhibit PF18791.1 NODE_84146_length_189_cov_2.207792_g76205_i0forward_frame_2 - 0.15 11.6 1.5 0.32 10.5 0.0 2.1 1 1 1 2 2 2 0 Transport inhibitor response 1 protein domain TnpB_IS66 PF05717.13 NODE_84144_length_189_cov_2.220779_g76203_i0forward_frame_3 - 0.027 14.4 0.0 0.027 14.4 0.0 1.1 1 0 0 1 1 1 0 IS66 Orf2 like protein ACR_tran PF00873.19 NODE_84144_length_189_cov_2.220779_g76203_i0forward_frame_3 - 0.22 9.2 0.0 0.24 9.0 0.0 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family Opy2 PF09463.10 NODE_84144_length_189_cov_2.220779_g76203_i0forward_frame_2 - 1.9 8.9 11.7 0.24 11.8 6.8 1.9 2 1 0 2 2 2 0 Opy2 protein DUF1768 PF08719.11 NODE_84142_length_189_cov_2.240260_g76201_i0reverse_frame_3 - 5.4e-12 46.2 0.1 6e-12 46.1 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) UPF0565 PF10561.9 NODE_84142_length_189_cov_2.240260_g76201_i0reverse_frame_3 - 0.2 10.9 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Methyltransf_25 PF13649.6 NODE_84138_length_189_cov_2.253247_g76197_i0forward_frame_2 - 4.4e-05 24.1 0.0 4.6e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_84138_length_189_cov_2.253247_g76197_i0forward_frame_2 - 0.0001 22.9 0.0 0.00011 22.8 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_84138_length_189_cov_2.253247_g76197_i0forward_frame_2 - 0.00019 21.3 0.0 0.00021 21.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain DUF4616 PF15394.6 NODE_84137_length_189_cov_2.266234_g76196_i0reverse_frame_2 - 0.11 11.4 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4616) GFO_IDH_MocA PF01408.22 NODE_84136_length_189_cov_2.298701_g76195_i0forward_frame_3 - 8.3e-05 23.4 0.0 8.8e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Cas6b_C PF17262.2 NODE_84135_length_189_cov_2.298701_g76194_i0forward_frame_3 - 0.069 13.2 1.0 0.074 13.2 1.0 1.1 1 0 0 1 1 1 0 Cas6b C-terminal domain ATP-grasp PF02222.22 NODE_84133_length_189_cov_2.324675_g76192_i0forward_frame_3 - 0.14 11.8 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 ATP-grasp domain zf-FCS PF06467.14 NODE_84129_length_189_cov_2.337662_g76188_i0forward_frame_3 - 0.09 12.7 3.4 0.15 12.0 3.4 1.5 1 1 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif DUF2527 PF10736.9 NODE_84127_length_189_cov_2.370130_g76186_i0reverse_frame_2 - 0.13 12.1 0.4 0.26 11.2 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) Diedel PF13164.6 NODE_84122_length_189_cov_2.389610_g76181_i0reverse_frame_2 - 0.03 14.7 3.8 0.034 14.6 3.8 1.0 1 0 0 1 1 1 0 Diedel IcmF_C PF06744.12 NODE_84121_length_189_cov_2.402597_g76180_i0forward_frame_3 - 0.00025 20.7 0.1 0.00026 20.7 0.1 1.0 1 0 0 1 1 1 1 Type VI secretion protein IcmF C-terminal Gin PF10764.9 NODE_84119_length_189_cov_2.441558_g76178_i0forward_frame_2 - 0.028 14.4 3.7 0.037 14.0 3.7 1.2 1 0 0 1 1 1 0 Inhibitor of sigma-G Gin OTT_1508_deam PF14441.6 NODE_84112_length_189_cov_2.597403_g76171_i0reverse_frame_2 - 0.067 13.2 3.0 0.078 13.0 3.0 1.3 1 1 0 1 1 1 0 OTT_1508-like deaminase DUF4818 PF16089.5 NODE_84111_length_189_cov_2.616883_g76170_i0reverse_frame_2 - 0.024 15.1 0.7 0.028 14.9 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) Kelch_2 PF07646.15 NODE_84110_length_189_cov_2.629870_g76169_i0reverse_frame_2 - 0.6 10.2 3.6 3.8 7.6 0.6 2.4 2 0 0 2 2 2 0 Kelch motif RAP1 PF07218.11 NODE_84109_length_189_cov_2.649351_g76168_i0reverse_frame_2 - 1.6 6.9 5.8 1.6 6.9 5.8 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Pkinase PF00069.25 NODE_84108_length_189_cov_2.688312_g76167_i0reverse_frame_2 - 0.00055 19.4 0.0 0.0007 19.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF4752 PF15944.5 NODE_84108_length_189_cov_2.688312_g76167_i0forward_frame_3 - 0.12 12.4 1.8 0.13 12.3 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4752) TMEM132D_N PF15705.5 NODE_84107_length_189_cov_2.759740_g76166_i0forward_frame_3 - 0.0093 15.8 0.1 0.0098 15.7 0.1 1.1 1 0 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, N-term GlgS PF08971.11 NODE_84106_length_189_cov_2.792208_g76165_i0forward_frame_2 - 6.3e-26 90.2 0.2 7.1e-26 90.0 0.2 1.0 1 0 0 1 1 1 1 Glycogen synthesis protein Corona_nucleoca PF00937.18 NODE_84105_length_189_cov_2.811688_g76164_i0forward_frame_2 - 0.65 9.0 5.3 0.58 9.1 5.3 1.1 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Ornatin PF02088.15 NODE_84102_length_189_cov_2.948052_g76161_i0forward_frame_2 - 0.089 12.6 0.1 0.089 12.6 0.1 1.7 1 1 0 1 1 1 0 Ornatin PrcB_C PF14343.6 NODE_84099_length_189_cov_2.993506_g76158_i0forward_frame_2 - 0.032 14.3 0.0 0.052 13.7 0.0 1.3 1 0 0 1 1 1 0 PrcB C-terminal Arc_C PF18162.1 NODE_84098_length_189_cov_3.012987_g76157_i0forward_frame_2 - 0.072 12.9 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Arc C-lobe PBP5_C PF07943.13 NODE_84097_length_189_cov_3.025974_g76156_i0reverse_frame_2 - 1.9e-11 44.1 0.0 2e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain OTOS PF15182.6 NODE_84096_length_189_cov_3.032468_g76155_i0reverse_frame_3 - 0.029 14.3 0.1 0.031 14.2 0.1 1.2 1 0 0 1 1 1 0 Otospiralin Integrase_H2C2 PF17921.1 NODE_84096_length_189_cov_3.032468_g76155_i0reverse_frame_3 - 0.13 12.3 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 Integrase zinc binding domain DUF3504 PF12012.8 NODE_84095_length_189_cov_3.038961_g76154_i0forward_frame_3 - 0.018 15.0 0.2 0.02 14.8 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3504) Defensin_int PF17858.1 NODE_84091_length_189_cov_3.220779_g76150_i0reverse_frame_2 - 0.005 16.8 5.3 0.0071 16.3 5.3 1.2 1 0 0 1 1 1 1 Platypus intermediate defensin-like peptide GAS PF13851.6 NODE_84090_length_189_cov_3.331169_g76149_i0reverse_frame_2 - 0.0032 16.9 4.5 0.0036 16.7 4.5 1.0 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding zf-HC5HC2H PF13771.6 NODE_84086_length_189_cov_3.759740_g76145_i0reverse_frame_2 - 0.069 13.4 3.7 0.07 13.4 3.7 1.2 1 0 0 1 1 1 0 PHD-like zinc-binding domain rve PF00665.26 NODE_84084_length_189_cov_4.259740_g76143_i0forward_frame_3 - 2.3e-05 24.6 0.0 2.4e-05 24.5 0.0 1.0 1 0 0 1 1 1 1 Integrase core domain zf-BED PF02892.15 NODE_84082_length_189_cov_4.396104_g76141_i0forward_frame_3 - 0.068 13.2 3.0 0.14 12.2 2.9 1.7 1 1 0 1 1 1 0 BED zinc finger NEXCaM_BD PF16644.5 NODE_84080_length_189_cov_4.512987_g76139_i0reverse_frame_3 - 0.0026 18.0 2.7 0.0026 18.0 2.7 1.1 1 0 0 1 1 1 1 Regulatory region of Na+/H+ exchanger NHE binds to calmodulin 3-PAP PF12578.8 NODE_84078_length_189_cov_4.766234_g76137_i0forward_frame_3 - 0.053 13.2 0.0 0.053 13.2 0.0 1.1 1 0 0 1 1 1 0 Myotubularin-associated protein fn3_6 PF17766.1 NODE_84078_length_189_cov_4.766234_g76137_i0forward_frame_2 - 0.064 13.4 0.0 0.071 13.3 0.0 1.0 1 0 0 1 1 1 0 Fibronectin type-III domain Peptidase_S74 PF13884.6 NODE_84077_length_189_cov_4.935065_g76136_i0reverse_frame_3 - 0.068 13.5 0.0 0.097 13.0 0.0 1.3 1 0 0 1 1 1 0 Chaperone of endosialidase DUF5435 PF17503.2 NODE_84074_length_189_cov_7.188312_g76133_i0reverse_frame_2 - 0.032 14.0 0.2 0.033 13.9 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5435) DUF1013 PF06242.11 NODE_84073_length_189_cov_8.064935_g76132_i0reverse_frame_3 - 0.042 13.9 0.0 0.05 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1013) CCB1 PF12046.8 NODE_84073_length_189_cov_8.064935_g76132_i0forward_frame_2 - 0.14 11.5 0.7 0.17 11.2 0.7 1.1 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B CBP_BcsF PF11120.8 NODE_84070_length_189_cov_13.149351_g76129_i0reverse_frame_2 - 0.2 11.8 2.1 0.28 11.3 2.1 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF Corona_NSP4_C PF16348.5 NODE_84070_length_189_cov_13.149351_g76129_i0forward_frame_3 - 0.063 14.1 0.3 0.069 14.0 0.3 1.1 1 0 0 1 1 1 0 Coronavirus nonstructural protein 4 C-terminus GAD PF02938.14 NODE_84070_length_189_cov_13.149351_g76129_i0forward_frame_2 - 0.027 14.7 0.1 0.028 14.7 0.1 1.1 1 0 0 1 1 1 0 GAD domain GBP PF02263.19 NODE_84070_length_189_cov_13.149351_g76129_i0forward_frame_2 - 0.028 13.7 0.1 0.03 13.6 0.1 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, N-terminal domain RGS_DHEX PF18148.1 NODE_84070_length_189_cov_13.149351_g76129_i0forward_frame_2 - 0.029 14.5 1.5 0.03 14.4 1.5 1.0 1 0 0 1 1 1 0 Regulator of G-protein signalling DHEX domain DUF1515 PF07439.11 NODE_84069_length_189_cov_13.824675_g76128_i0reverse_frame_2 - 0.052 13.6 0.0 0.053 13.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) DUF1059 PF06348.11 NODE_84069_length_189_cov_13.824675_g76128_i0reverse_frame_2 - 0.095 12.9 0.2 0.15 12.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1059) zf_C2H2_6 PF18450.1 NODE_84069_length_189_cov_13.824675_g76128_i0forward_frame_3 - 0.022 14.4 0.7 0.022 14.4 0.7 1.6 2 0 0 2 2 2 0 Zinc Finger domain zf_C2H2_6 PF18450.1 NODE_84069_length_189_cov_13.824675_g76128_i0forward_frame_2 - 0.022 14.5 0.3 0.04 13.6 0.3 1.5 1 0 0 1 1 1 0 Zinc Finger domain C_tripleX PF02363.19 NODE_84069_length_189_cov_13.824675_g76128_i0forward_frame_2 - 7.3 7.1 16.0 0.87 10.0 9.6 2.5 2 0 0 2 2 2 0 Cysteine rich repeat DUF2116 PF09889.9 NODE_84068_length_189_cov_14.233766_g76127_i0reverse_frame_3 - 0.14 12.1 2.3 0.19 11.8 2.3 1.4 1 0 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Albumin_I PF08027.11 NODE_84066_length_189_cov_16.142857_g76125_i0forward_frame_3 - 0.23 11.1 5.1 0.33 10.6 5.1 1.3 1 0 0 1 1 1 0 Albumin I chain b Ribosomal_S27e PF01667.17 NODE_84065_length_189_cov_16.636364_g76124_i0reverse_frame_3 - 4 7.2 8.3 2.5 7.9 0.6 2.2 2 0 0 2 2 2 0 Ribosomal protein S27 Pro-kuma_activ PF09286.11 NODE_84065_length_189_cov_16.636364_g76124_i0reverse_frame_2 - 0.21 11.9 0.1 0.23 11.8 0.1 1.1 1 0 0 1 1 1 0 Pro-kumamolisin, activation domain YajC PF02699.15 NODE_84063_length_189_cov_18.772727_g76122_i0forward_frame_3 - 0.2 11.6 0.6 0.23 11.4 0.6 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit DUF2249 PF10006.9 NODE_84060_length_189_cov_23.090909_g76119_i0reverse_frame_2 - 0.2 11.6 0.0 0.27 11.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) FtsK_SpoIIIE PF01580.18 NODE_84059_length_189_cov_23.863636_g76118_i0reverse_frame_2 - 0.046 13.1 0.0 0.047 13.0 0.0 1.0 1 0 0 1 1 1 0 FtsK/SpoIIIE family Birna_VP3 PF01767.16 NODE_84058_length_189_cov_24.272727_g76117_i0reverse_frame_3 - 0.043 13.9 5.3 0.044 13.9 5.3 1.0 1 0 0 1 1 1 0 Birnavirus VP3 protein Gpi16 PF04113.14 NODE_84058_length_189_cov_24.272727_g76117_i0forward_frame_3 - 0.18 10.2 0.5 0.22 9.9 0.5 1.0 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component NLRC4_HD PF17889.1 NODE_84057_length_189_cov_24.331169_g76116_i0reverse_frame_2 - 0.0068 16.7 0.1 0.0071 16.7 0.1 1.1 1 0 0 1 1 1 1 NLRC4 helical domain DUF2232 PF09991.9 NODE_84055_length_189_cov_25.649351_g76114_i0forward_frame_2 - 0.049 12.8 0.6 0.054 12.7 0.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2232) Trp_oprn_chp PF09534.10 NODE_84054_length_189_cov_25.987013_g76113_i0reverse_frame_2 - 0.066 13.0 0.3 0.089 12.6 0.3 1.2 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) TPK_B1_binding PF04265.14 NODE_84050_length_189_cov_27.623377_g76109_i0forward_frame_3 - 0.062 13.0 0.0 0.17 11.6 0.0 1.6 1 1 0 1 1 1 0 Thiamin pyrophosphokinase, vitamin B1 binding domain Phage_integrase PF00589.22 NODE_84047_length_189_cov_29.889610_g76106_i0reverse_frame_2 - 0.064 13.0 0.1 0.065 13.0 0.1 1.1 1 0 0 1 1 1 0 Phage integrase family TMEM125 PF15109.6 NODE_84047_length_189_cov_29.889610_g76106_i0forward_frame_3 - 0.1 12.9 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 TMEM125 protein family TPR_20 PF14561.6 NODE_84044_length_189_cov_32.201299_g76103_i0reverse_frame_2 - 0.0016 18.8 0.8 0.0018 18.6 0.8 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat COX7a PF02238.15 NODE_84042_length_189_cov_32.883117_g76101_i0reverse_frame_3 - 0.1 13.0 0.9 0.23 11.9 0.1 1.8 1 1 1 2 2 2 0 Cytochrome c oxidase subunit VII Antimicrobial_6 PF08036.11 NODE_84040_length_189_cov_32.948052_g76099_i0forward_frame_3 - 0.037 14.1 2.3 0.17 12.0 0.7 2.1 2 0 0 2 2 2 0 Diapausin family of antimicrobial peptide FixQ PF05545.11 NODE_84040_length_189_cov_32.948052_g76099_i0forward_frame_2 - 0.56 10.2 0.0 0.56 10.2 0.0 1.8 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ YMF19 PF02326.15 NODE_84038_length_189_cov_34.746753_g76097_i0forward_frame_2 - 0.066 14.0 1.3 0.076 13.8 1.3 1.2 1 0 0 1 1 1 0 Plant ATP synthase F0 DUF4312 PF14189.6 NODE_84037_length_189_cov_36.681818_g76096_i0forward_frame_2 - 0.7 9.9 2.6 0.93 9.5 2.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4312) MbtH PF03621.13 NODE_84030_length_189_cov_39.662338_g76089_i0forward_frame_3 - 0.092 12.2 0.7 0.12 11.8 0.7 1.2 1 0 0 1 1 1 0 MbtH-like protein MORN PF02493.20 NODE_84027_length_189_cov_40.785714_g76086_i0forward_frame_2 - 9.7e-05 22.0 2.6 0.00017 21.3 2.6 1.5 1 0 0 1 1 1 1 MORN repeat SR-25 PF10500.9 NODE_84026_length_189_cov_41.077922_g76085_i0reverse_frame_2 - 0.067 12.8 5.4 0.072 12.7 5.4 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein RCC1 PF00415.18 NODE_84024_length_189_cov_43.324675_g76083_i0reverse_frame_3 - 1.3e-11 45.0 0.6 7.3e-08 32.9 0.0 2.0 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_84024_length_189_cov_43.324675_g76083_i0reverse_frame_3 - 1.8e-07 30.8 0.7 2.3e-07 30.4 0.7 1.2 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat GSK-3_bind PF05350.12 NODE_84020_length_189_cov_44.279221_g76079_i0forward_frame_3 - 0.019 14.3 2.1 0.019 14.3 2.1 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding YjcB PF15940.5 NODE_84018_length_189_cov_46.870130_g76077_i0forward_frame_3 - 0.12 12.6 0.0 0.14 12.3 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function PDDEXK_1 PF12705.7 NODE_84017_length_189_cov_47.532468_g76076_i0forward_frame_2 - 0.11 12.4 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Albumin_I_a PF16720.5 NODE_84009_length_189_cov_56.435065_g76068_i0reverse_frame_2 - 0.028 14.3 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 Albumin I chain a SR-25 PF10500.9 NODE_84007_length_189_cov_58.019481_g76066_i0forward_frame_2 - 0.063 12.9 7.7 0.068 12.8 7.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein CBM_26 PF16824.5 NODE_84006_length_189_cov_60.889610_g76065_i0forward_frame_2 - 0.15 12.2 0.0 0.15 12.2 0.0 1.0 1 0 0 1 1 1 0 C-terminal carbohydrate-binding module Engrail_1_C_sig PF10525.9 NODE_84002_length_189_cov_74.974026_g76061_i0reverse_frame_2 - 0.15 11.3 0.3 0.28 10.4 0.3 1.4 1 0 0 1 1 1 0 Engrailed homeobox C-terminal signature domain Meleagrin PF08189.11 NODE_84002_length_189_cov_74.974026_g76061_i0forward_frame_2 - 0.048 13.4 4.8 0.084 12.6 4.8 1.5 1 0 0 1 1 1 0 Meleagrin/Cygnin family LPAM_1 PF08139.12 NODE_84000_length_189_cov_81.279221_g76059_i0reverse_frame_2 - 0.44 11.1 3.0 0.67 10.6 3.0 1.3 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Auto_anti-p27 PF06677.12 NODE_83997_length_189_cov_83.889610_g76056_i0reverse_frame_3 - 0.072 13.3 2.0 0.13 12.4 2.0 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Fanconi_A PF03511.14 NODE_83989_length_189_cov_148.474026_g76048_i0forward_frame_3 - 0.07 13.0 0.5 0.086 12.8 0.5 1.3 1 1 0 1 1 1 0 Fanconi anaemia group A protein Ski_Sno PF02437.17 NODE_83985_length_189_cov_180.123377_g76044_i0forward_frame_2 - 0.19 11.5 0.7 9.8 6.0 0.1 2.1 1 1 1 2 2 2 0 SKI/SNO/DAC family LIX1 PF14954.6 NODE_83982_length_189_cov_227.733766_g76041_i0forward_frame_3 - 0.033 13.5 1.3 0.034 13.4 1.3 1.0 1 0 0 1 1 1 0 Limb expression 1 SNAPc_SNAP43 PF09808.9 NODE_83979_length_189_cov_1092.071429_g76038_i0forward_frame_3 - 1.1 9.2 5.5 1.1 9.1 5.5 1.1 1 0 0 1 1 1 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 GP41 PF00517.17 NODE_83979_length_189_cov_1092.071429_g76038_i0forward_frame_2 - 0.18 11.7 0.7 0.2 11.5 0.7 1.0 1 0 0 1 1 1 0 Retroviral envelope protein RE_MamI PF09567.10 NODE_83976_length_189_cov_124922.857143_g76035_i0reverse_frame_2 - 0.041 13.5 1.1 0.042 13.5 1.1 1.1 1 0 0 1 1 1 0 MamI restriction endonuclease NPCC PF08058.11 ORF99717 - 0.17 11.9 0.8 0.18 11.9 0.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component MLVIN_C PF18697.1 ORF99486 - 0.026 14.6 0.0 0.028 14.5 0.0 1.1 1 0 0 1 1 1 0 Murine leukemia virus (MLV) integrase (IN) C-terminal domain Vps54 PF07928.12 ORF99077 - 0.052 14.0 0.0 0.064 13.7 0.0 1.1 1 0 0 1 1 1 0 Vps54-like protein ZZ PF00569.17 ORF98924 - 0.014 15.2 0.2 0.022 14.6 0.2 1.3 1 0 0 1 1 1 0 Zinc finger, ZZ type DUF2838 PF10998.8 ORF98924 - 0.084 13.1 4.2 0.09 13.0 4.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) Mito_carr PF00153.27 ORF98183 - 4.7e-09 36.1 0.0 5.2e-09 35.9 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein Phageshock_PspG PF09583.10 ORF9800 - 0.0089 16.3 2.0 0.011 16.0 2.0 1.1 1 0 0 1 1 1 1 Phage shock protein G (Phageshock_PspG) 7tm_4 PF13853.6 ORF97345 - 0.021 14.5 0.9 0.022 14.5 0.9 1.0 1 0 0 1 1 1 0 Olfactory receptor RNA_pol_L_2 PF13656.6 ORF9679 - 0.0025 17.6 0.3 0.0031 17.2 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Myf5 PF12232.8 ORF9639 - 1.1 10.1 6.5 3.7 8.4 6.5 1.7 1 1 0 1 1 1 0 Myogenic determination factor 5 DUF3950 PF13132.6 ORF96064 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) HPHLAWLY PF14925.6 ORF95968 - 5.7 5.5 7.3 6.6 5.3 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF1084 PF06454.11 ORF95842 - 0.014 14.8 0.1 0.014 14.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DDE_Tnp_2 PF04693.12 ORF95842 - 0.13 11.5 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 MFA1_2 PF17317.2 ORF95842 - 0.22 11.3 1.8 0.36 10.6 1.8 1.2 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 HTH_18 PF12833.7 ORF95818 - 4e-15 55.8 0.1 4.4e-15 55.7 0.1 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF95818 - 8.2e-12 44.9 0.0 1.1e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix proteins, AraC family CAP_N PF01213.19 ORF95598 - 2.4 7.6 4.0 2.6 7.4 4.0 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal RNA_pol_L_2 PF13656.6 ORF95582 - 0.0025 17.6 0.3 0.0031 17.2 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain NS3_envE PF02723.14 ORF95572 - 2.4 8.3 11.8 3.2 7.9 11.8 1.4 1 1 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E CYSTM PF12734.7 ORF95501 - 0.049 14.0 2.9 0.049 14.0 2.9 2.0 2 0 0 2 2 2 0 Cysteine-rich TM module stress tolerance Mad3_BUB1_I PF08311.12 ORF94499 - 0.016 15.2 0.1 0.018 15.0 0.1 1.2 1 0 0 1 1 1 0 Mad3/BUB1 homology region 1 zf-AD PF07776.15 ORF94132 - 0.0047 17.1 1.6 0.0049 17.1 1.6 1.1 1 0 0 1 1 1 1 Zinc-finger associated domain (zf-AD) HCV_NS2 PF01538.18 ORF94132 - 0.017 14.8 0.9 0.019 14.7 0.9 1.0 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 Fungal_trans_2 PF11951.8 ORF94132 - 0.044 12.6 2.0 0.045 12.6 2.0 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain DUF3950 PF13132.6 ORF94123 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) Nipped-B_C PF12830.7 ORF93639 - 0.087 12.8 0.0 0.093 12.7 0.0 1.0 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus DUF2258 PF10015.9 ORF93639 - 0.1 12.7 0.5 0.13 12.4 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2258) POM121 PF15229.6 ORF93405 - 0.029 14.0 3.8 0.03 14.0 3.8 1.0 1 0 0 1 1 1 0 POM121 family DUF5130 PF17174.4 ORF93062 - 0.049 13.8 0.0 0.051 13.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5130) Adenine_deam_C PF13382.6 ORF92983 - 0.064 12.6 0.2 0.073 12.4 0.2 1.0 1 0 0 1 1 1 0 Adenine deaminase C-terminal domain BK_channel_a PF03493.18 ORF92495 - 0.05 13.8 0.2 0.05 13.8 0.2 1.1 1 0 0 1 1 1 0 Calcium-activated BK potassium channel alpha subunit RNA_pol_L_2 PF13656.6 ORF92434 - 0.0025 17.6 0.3 0.0031 17.2 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain BACK PF07707.15 ORF91891 - 4.7e-05 23.4 0.2 5.1e-05 23.3 0.2 1.1 1 0 0 1 1 1 1 BTB And C-terminal Kelch Ribosomal_S17 PF00366.20 ORF91891 - 0.059 13.5 0.0 0.062 13.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S17 TPR_17 PF13431.6 ORF9176 - 0.078 13.4 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF4723 PF15851.5 ORF91135 - 0.13 12.4 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4723) Tmemb_cc2 PF10267.9 ORF90255 - 0.17 11.0 3.7 0.19 10.9 3.7 1.0 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein SapB_2 PF03489.17 ORF89985 - 0.073 13.2 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Saposin-like type B, region 2 Sterol-sensing PF12349.8 ORF8963 - 0.052 13.4 0.1 0.053 13.4 0.1 1.0 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation Glycoprotein_G PF00802.19 ORF89416 - 0.19 11.1 1.6 0.21 10.9 1.6 1.1 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Corazonin PF17308.2 ORF89298 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin DNA_PPF PF02916.15 ORF89183 - 0.043 14.2 0.1 0.045 14.1 0.1 1.0 1 0 0 1 1 1 0 DNA polymerase processivity factor Dexa_ind PF15198.6 ORF8880 - 0.014 15.5 2.6 0.015 15.4 2.6 1.2 1 0 0 1 1 1 0 Dexamethasone-induced TMIE PF16038.5 ORF8880 - 0.64 9.9 3.0 1.1 9.2 3.0 1.3 1 0 0 1 1 1 0 TMIE protein SecIII_SopE_N PF05364.14 ORF87749 - 0.025 14.6 0.1 0.028 14.5 0.1 1.1 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus zf-C2H2_10 PF16588.5 ORF87672 - 0.32 10.8 0.4 0.32 10.8 0.4 2.5 3 0 0 3 3 3 0 C2H2 zinc-finger DUF4431 PF14485.6 ORF87528 - 8.5 6.3 7.5 0.87 9.4 2.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) ZipA_C PF04354.13 ORF86997 - 2e-14 53.6 0.2 2.5e-14 53.2 0.2 1.1 1 0 0 1 1 1 1 ZipA, C-terminal FtsZ-binding domain MraZ PF02381.18 ORF86997 - 0.087 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Radical_SAM_C PF16199.5 ORF8666 - 0.00028 20.9 0.0 0.00031 20.7 0.0 1.1 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Paramyxo_P_V_N PF13825.6 ORF85912 - 0.043 13.2 0.0 0.052 13.0 0.0 1.0 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus Toxin_29 PF08116.11 ORF8532 - 0.44 10.6 13.3 0.69 10.0 13.3 1.4 1 0 0 1 1 1 0 PhTx neurotoxin family DUF1096 PF06493.11 ORF85263 - 0.019 15.4 2.1 4 8.0 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1096) NqrM PF04400.13 ORF85263 - 1.3 8.8 8.4 0.17 11.7 1.2 2.2 1 1 1 2 2 2 0 (Na+)-NQR maturation NqrM BDHCT_assoc PF16204.5 ORF84933 - 0.032 13.9 3.2 0.03 14.0 3.2 1.1 1 0 0 1 1 1 0 BDHCT-box associated domain on Bloom syndrome protein Osteopontin PF00865.18 ORF84933 - 0.088 12.3 2.6 0.096 12.2 2.6 1.0 1 0 0 1 1 1 0 Osteopontin DUF4381 PF14316.6 ORF84253 - 0.031 14.5 0.1 0.031 14.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Myticin-prepro PF10690.9 ORF84196 - 0.13 12.6 2.8 0.15 12.4 2.8 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel TetR_C_30 PF17939.1 ORF84070 - 0.046 13.9 0.0 0.054 13.7 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Fungal_trans_2 PF11951.8 ORF84023 - 0.01 14.7 1.7 0.0093 14.8 1.7 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain HCV_NS2 PF01538.18 ORF84023 - 0.058 13.1 1.1 0.062 13.0 1.1 1.0 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 CC PF04942.14 ORF84010 - 0.059 13.6 0.5 0.074 13.3 0.5 1.2 1 0 0 1 1 1 0 CC domain DUF3270 PF11674.8 ORF83884 - 0.0027 17.9 4.4 0.0033 17.6 4.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) DUF1096 PF06493.11 ORF8384 - 0.077 13.5 0.0 0.1 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1096) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks444.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks444.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks444.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks444.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:31 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- VESA1_N PF12785.7 ORF82502 - 4.5 6.1 11.0 4.9 6.0 11.0 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 HisKA_7TM PF16927.5 ORF82456 - 0.18 11.8 0.0 0.19 11.8 0.0 1.0 1 0 0 1 1 1 0 N-terminal 7TM region of histidine kinase PPL5 PF18168.1 ORF82037 - 0.038 13.3 0.0 0.046 13.0 0.0 1.1 1 0 0 1 1 1 0 Prim-pol family 5 zf-HYPF PF07503.12 ORF82037 - 3.6 7.4 8.6 3.2 7.6 0.5 3.0 3 0 0 3 3 3 0 HypF finger Ist1 PF03398.14 ORF81419 - 0.053 13.5 0.2 0.055 13.4 0.2 1.0 1 0 0 1 1 1 0 Regulator of Vps4 activity in the MVB pathway DUF3302 PF11742.8 ORF81303 - 0.048 13.8 0.3 0.067 13.3 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3302) Bunya_G2 PF03563.13 ORF81018 - 1.8 7.7 5.1 2 7.6 5.1 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 DUF4431 PF14485.6 ORF80790 - 8.5 6.3 7.5 0.87 9.4 2.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) Phage_1_1 PF08200.11 ORF80498 - 0.062 13.7 2.0 0.1 13.0 2.0 1.3 1 0 0 1 1 1 0 Bacteriophage 1.1 Protein Ribosomal_S27e PF01667.17 ORF80104 - 0.06 13.1 0.3 0.094 12.4 0.0 1.5 2 0 0 2 2 2 0 Ribosomal protein S27 DUF3087 PF11286.8 ORF79434 - 0.013 15.0 0.5 0.014 14.9 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) TSSC4 PF15264.6 ORF7877 - 0.028 14.7 0.3 0.04 14.2 0.3 1.2 1 0 0 1 1 1 0 Tumour suppressing sub-chromosomal transferable candidate 4 TSSC4 PF15264.6 ORF76212 - 0.028 14.7 0.3 0.04 14.2 0.3 1.2 1 0 0 1 1 1 0 Tumour suppressing sub-chromosomal transferable candidate 4 DUF3950 PF13132.6 ORF76017 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) A1_Propeptide PF07966.12 ORF75961 - 0.042 13.7 0.1 0.073 13.0 0.1 1.4 1 0 0 1 1 1 0 A1 Propeptide DUF2633 PF11119.8 ORF75031 - 1.3 9.0 2.8 2.3 8.2 2.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2633) 7TM_GPCR_Srt PF10321.9 ORF74108 - 0.14 11.1 0.0 0.14 11.1 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt Herpes_UL3 PF03369.13 ORF74084 - 0.075 13.6 0.0 0.081 13.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL3 protein RVT_N PF13655.6 ORF7381 - 0.015 15.5 0.0 0.02 15.2 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain of reverse transcriptase Mito_carr PF00153.27 ORF73485 - 4e-05 23.4 0.0 4e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein STALD PF18185.1 ORF73485 - 0.054 12.8 0.0 0.055 12.8 0.0 1.0 1 0 0 1 1 1 0 Sir2- and TIR-associating SLOG family BESS PF02944.20 ORF73461 - 0.068 13.0 1.4 0.15 11.9 1.4 1.6 1 0 0 1 1 1 0 BESS motif DUF4118 PF13493.6 ORF73022 - 0.036 13.8 1.0 0.043 13.6 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) eIF-5_eIF-2B PF01873.17 ORF72254 - 0.0015 18.4 0.1 0.0018 18.1 0.1 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 DUF1748 PF08520.10 ORF72254 - 0.13 12.2 0.1 0.16 11.9 0.1 1.2 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1748) FAM193_C PF15914.5 ORF72166 - 0.036 13.8 0.1 0.045 13.5 0.1 1.1 1 0 0 1 1 1 0 FAM193 family C-terminal RsgA_N PF16745.5 ORF71671 - 0.14 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 RsgA N-terminal domain Med25 PF11232.8 ORF7106 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF7106 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein Glyco_hydro_2 PF00703.21 ORF70560 - 0.025 15.2 0.1 0.029 15.0 0.1 1.0 1 0 0 1 1 1 0 Glycosyl hydrolases family 2 Orthopox_F14 PF06076.12 ORF70462 - 0.049 13.9 0.2 0.074 13.3 0.2 1.4 1 1 0 1 1 1 0 Orthopoxvirus F14 protein EVI2A PF05399.11 ORF7032 - 3.4 7.2 5.3 3 7.4 5.3 1.2 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) GIT1_C PF12205.8 ORF69926 - 0.034 14.3 0.0 0.034 14.3 0.0 1.0 1 0 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term PRKCSH-like PF12999.7 ORF68944 - 0.0052 16.6 0.1 0.0052 16.6 0.1 1.0 1 0 0 1 1 1 1 Glucosidase II beta subunit-like BssS PF13991.6 ORF68850 - 0.089 12.9 1.4 1.4 9.1 0.0 2.6 2 1 1 3 3 3 0 BssS protein family DUF1084 PF06454.11 ORF68821 - 0.014 14.8 0.1 0.014 14.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DDE_Tnp_2 PF04693.12 ORF68821 - 0.13 11.5 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 MFA1_2 PF17317.2 ORF68821 - 0.22 11.3 1.8 0.36 10.6 1.8 1.2 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 Corazonin PF17308.2 ORF68616 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin MAGE_N PF12440.8 ORF68352 - 0.53 11.0 5.0 0.56 10.9 5.0 1.1 1 0 0 1 1 1 0 Melanoma associated antigen family N terminal DsrD PF08679.11 ORF67756 - 0.15 12.3 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) DUF2545 PF10810.8 ORF6757 - 0.041 14.0 1.8 0.05 13.7 1.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2545) Serpentine_r_xa PF03383.15 ORF6757 - 0.055 13.4 2.4 0.051 13.5 2.4 1.1 1 0 0 1 1 1 0 Caenorhabditis serpentine receptor-like protein, class xa TPR_17 PF13431.6 ORF67214 - 0.078 13.4 0.0 0.13 12.7 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat POC3_POC4 PF10448.9 ORF66831 - 0.074 13.1 0.0 0.081 12.9 0.0 1.1 1 0 0 1 1 1 0 20S proteasome chaperone assembly proteins 3 and 4 HigB-like_toxin PF05015.13 ORF6656 - 0.065 13.6 0.1 0.07 13.5 0.1 1.1 1 0 0 1 1 1 0 RelE-like toxin of type II toxin-antitoxin system HigB Consortin_C PF15281.6 ORF6573 - 0.22 11.5 0.6 0.26 11.3 0.6 1.1 1 0 0 1 1 1 0 Consortin C-terminus DUF1231 PF06802.11 ORF64904 - 0.026 13.7 0.0 0.026 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1231) CUT PF02376.15 ORF64198 - 0.041 14.1 0.6 0.046 13.9 0.6 1.1 1 0 0 1 1 1 0 CUT domain HTH_39 PF14090.6 ORF63855 - 0.042 13.6 0.1 0.059 13.1 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain NPCC PF08058.11 ORF62892 - 0.17 11.9 0.8 0.18 11.9 0.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component Ost4 PF10215.9 ORF62778 - 0.016 15.0 0.5 0.024 14.4 0.5 1.3 1 0 0 1 1 1 0 Oligosaccaryltransferase Trefoil PF00088.18 ORF62507 - 0.042 13.7 0.5 0.062 13.2 0.3 1.5 1 1 0 1 1 1 0 Trefoil (P-type) domain DUF3950 PF13132.6 ORF62154 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) BILBO1_N PF18281.1 ORF62109 - 0.013 15.9 0.1 0.014 15.8 0.1 1.1 1 0 0 1 1 1 0 BILBO1 N-terminal domain DUF5466 PF17554.2 ORF62094 - 0.99 9.7 5.3 5.8 7.2 1.5 2.2 1 1 1 2 2 2 0 Family of unknown function (DUF5466) AAA_lid_4 PF17864.1 ORF61857 - 0.00095 18.9 0.2 0.00095 18.9 0.2 1.2 1 0 0 1 1 1 1 RuvB AAA lid domain HTH_7 PF02796.15 ORF61669 - 0.028 14.5 0.4 0.04 14.0 0.4 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Thr_dehydrat_C PF00585.18 ORF61628 - 0.019 14.7 0.0 0.02 14.7 0.0 1.1 1 0 0 1 1 1 0 C-terminal regulatory domain of Threonine dehydratase DUF3950 PF13132.6 ORF60799 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) LRR_4 PF12799.7 ORF60680 - 0.001 19.4 0.0 0.015 15.7 0.1 2.0 1 1 1 2 2 2 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF60680 - 0.067 13.0 0.0 1.1 9.0 0.0 2.1 2 0 0 2 2 2 0 Leucine rich repeat DHODB_Fe-S_bind PF10418.9 ORF60572 - 0.0075 16.1 0.9 0.0075 16.1 0.9 1.7 2 0 0 2 2 2 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Intg_mem_TP0381 PF09529.10 ORF60031 - 0.0069 15.9 0.5 0.0075 15.8 0.5 1.1 1 0 0 1 1 1 1 Integral membrane protein (intg_mem_TP0381) DUF1084 PF06454.11 ORF59734 - 0.014 14.8 0.1 0.014 14.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DDE_Tnp_2 PF04693.12 ORF59734 - 0.13 11.5 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 MFA1_2 PF17317.2 ORF59734 - 0.22 11.3 1.8 0.36 10.6 1.8 1.2 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 RRN3 PF05327.11 ORF59333 - 0.15 10.6 1.0 0.16 10.5 1.0 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Trefoil PF00088.18 ORF59093 - 0.042 13.7 0.5 0.062 13.2 0.3 1.5 1 1 0 1 1 1 0 Trefoil (P-type) domain Corazonin PF17308.2 ORF58783 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin VESA1_N PF12785.7 ORF58616 - 1.7 7.6 14.3 1.7 7.5 14.3 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Pap_E4 PF02711.14 ORF58236 - 2.7 9.0 7.1 3.6 8.6 7.1 1.2 1 0 0 1 1 1 0 E4 protein DUF4566 PF15130.6 ORF57588 - 0.0069 15.8 0.7 0.007 15.8 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4566) ArsR PF09824.9 ORF57588 - 0.022 14.3 0.2 0.022 14.3 0.2 1.1 1 0 0 1 1 1 0 ArsR transcriptional regulator DsrD PF08679.11 ORF56758 - 0.15 12.3 0.0 0.2 12.0 0.0 1.2 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) Chordopox_RPO7 PF05864.12 ORF56572 - 0.034 14.4 0.2 0.043 14.1 0.2 1.1 1 0 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) CC PF04942.14 ORF5644 - 0.059 13.6 0.5 0.074 13.3 0.5 1.2 1 0 0 1 1 1 0 CC domain Med25 PF11232.8 ORF56239 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF56239 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein Pox_F15 PF04596.12 ORF56232 - 0.015 15.0 0.1 0.016 15.0 0.1 1.1 1 0 0 1 1 1 0 Poxvirus protein F15 zf-FPG_IleRS PF06827.14 ORF56127 - 0.05 13.5 1.6 2 8.3 0.0 2.2 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS fn3_2 PF16893.5 ORF55493 - 0.099 12.8 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Fibronectin type III domain LPD37 PF18853.1 ORF55460 - 0.1 12.1 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Large polyvalent protein associated domain 37 Arc_trans_TRASH PF08394.10 ORF55307 - 0.044 14.1 1.3 0.044 14.1 1.3 1.7 2 0 0 2 2 2 0 Archaeal TRASH domain CBS PF00571.28 ORF55305 - 0.00011 22.6 0.0 0.00015 22.1 0.0 1.3 1 1 0 1 1 1 1 CBS domain DUF2244 PF10003.9 ORF55084 - 0.3 10.8 8.5 0.33 10.6 8.5 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) LSR PF05624.14 ORF55084 - 0.87 9.6 10.5 2.7 8.1 10.5 1.8 1 1 0 1 1 1 0 Lipolysis stimulated receptor (LSR) DUF2207 PF09972.9 ORF55084 - 1 8.0 3.6 1 8.1 3.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF454 PF04304.13 ORF55084 - 2.4 8.2 22.8 2.8 8.0 22.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF454) DUF805 PF05656.14 ORF55084 - 2.6 8.5 9.3 2.7 8.5 9.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF805) DUF3487 PF11990.8 ORF55084 - 5.3 7.0 14.4 5.7 6.9 14.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) TcpE PF12648.7 ORF55084 - 5.7 7.5 15.6 6.4 7.4 15.6 1.1 1 0 0 1 1 1 0 TcpE family HALZ PF02183.18 ORF54605 - 0.00042 20.5 6.2 0.00069 19.8 0.9 2.4 2 1 0 2 2 2 1 Homeobox associated leucine zipper YscO PF07321.12 ORF54605 - 0.001 19.1 3.2 0.0012 18.8 3.2 1.1 1 0 0 1 1 1 1 Type III secretion protein YscO CDH1_2_SANT_HL1 PF18375.1 ORF54605 - 0.055 14.2 3.0 0.066 13.9 3.0 1.1 1 0 0 1 1 1 0 CDH1/2 SANT-Helical linker 1 IFT57 PF10498.9 ORF54605 - 0.056 12.4 6.0 0.062 12.3 6.0 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 DUF4250 PF14056.6 ORF54605 - 0.11 12.5 2.6 0.19 11.7 1.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) DUF3950 PF13132.6 ORF54516 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) Kinesin PF00225.23 ORF54022 - 0.00016 20.7 0.1 0.00021 20.4 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain CLTH PF10607.9 ORF53435 - 0.11 12.4 0.8 0.12 12.3 0.8 1.0 1 0 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain DUF1178 PF06676.11 ORF52926 - 0.22 11.9 5.3 0.23 11.8 5.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) BMF PF15185.6 ORF52697 - 0.038 13.7 0.0 0.04 13.6 0.0 1.1 1 0 0 1 1 1 0 Bcl-2-modifying factor, apoptosis SMC_N PF02463.19 ORF52697 - 0.11 12.0 0.1 0.11 11.9 0.1 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Intg_mem_TP0381 PF09529.10 ORF51846 - 0.0069 15.9 0.5 0.0075 15.8 0.5 1.1 1 0 0 1 1 1 1 Integral membrane protein (intg_mem_TP0381) Med25 PF11232.8 ORF51649 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF51649 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein UCH_C PF18031.1 ORF50693 - 0.16 11.9 0.2 0.24 11.4 0.2 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolases Bunya_G2 PF03563.13 ORF50550 - 1.8 7.7 5.1 2 7.6 5.1 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 MerR PF00376.23 ORF4994 - 0.13 12.1 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 MerR family regulatory protein DUF2633 PF11119.8 ORF49798 - 1.3 9.0 2.8 2.3 8.2 2.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2633) PhrC_PhrF PF11131.8 ORF49508 - 0.2 11.3 1.2 0.31 10.7 1.2 1.3 1 0 0 1 1 1 0 Rap-phr extracellular signalling SnAPC_2_like PF11035.8 ORF48723 - 0.063 13.4 0.1 0.072 13.2 0.1 1.1 1 0 0 1 1 1 0 Small nuclear RNA activating complex subunit 2, SNAP190 Myb TNFR_c6 PF00020.18 ORF48569 - 0.0062 16.9 1.2 0.01 16.2 1.2 1.4 1 0 0 1 1 1 1 TNFR/NGFR cysteine-rich region Jak1_Phl PF17887.1 ORF47074 - 0.15 12.0 0.5 0.15 12.0 0.5 1.0 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain DUF5494 PF17598.2 ORF47054 - 0.11 12.7 0.1 0.13 12.4 0.1 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5494) DUF3332 PF11810.8 ORF46485 - 0.53 9.9 4.1 0.61 9.7 4.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) DUF1433 PF07252.11 ORF46326 - 0.0088 16.3 1.1 0.01 16.1 1.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1433) VbhA PF18495.1 ORF44836 - 0.066 13.1 1.3 0.33 10.9 1.3 1.9 2 0 0 2 2 2 0 Antitoxin VbhA zf_Hakai PF18408.1 ORF44534 - 0.035 13.8 1.6 3.9 7.3 0.1 2.4 1 1 1 2 2 2 0 C2H2 Hakai zinc finger domain LSM PF01423.22 ORF44489 - 5.4e-07 29.2 0.1 6.8e-07 28.9 0.1 1.1 1 0 0 1 1 1 1 LSM domain Phospho_p8 PF10195.9 ORF43927 - 0.22 12.1 0.6 0.29 11.7 0.6 1.2 1 0 0 1 1 1 0 DNA-binding nuclear phosphoprotein p8 WD40_3 PF15911.5 ORF43549 - 0.097 12.7 0.0 0.2 11.7 0.0 1.5 1 1 0 1 1 1 0 WD domain, G-beta repeat CBFD_NFYB_HMF PF00808.23 ORF43279 - 1.4e-06 28.5 1.9 1.6e-06 28.3 1.9 1.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 ORF43279 - 0.0067 16.8 0.3 0.007 16.7 0.3 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Endonuclease_7 PF02945.15 ORF42725 - 0.0079 16.1 3.2 0.0092 15.9 3.2 1.1 1 0 0 1 1 1 1 Recombination endonuclease VII TIP39 PF14980.6 ORF42295 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 TIP39 peptide AWS PF17907.1 ORF4207 - 0.037 14.1 0.9 0.037 14.1 0.9 1.7 2 0 0 2 2 2 0 AWS domain CEBP_ZZ PF16366.5 ORF41620 - 0.045 14.0 0.7 0.045 14.0 0.7 2.4 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain DUF1084 PF06454.11 ORF40885 - 0.014 14.8 0.1 0.014 14.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DDE_Tnp_2 PF04693.12 ORF40885 - 0.13 11.5 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 MFA1_2 PF17317.2 ORF40885 - 0.22 11.3 1.8 0.36 10.6 1.8 1.2 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 EF-hand_7 PF13499.6 ORF39778 - 4.1e-05 24.0 4.6 0.0047 17.3 0.4 1.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF39778 - 0.0019 18.0 0.3 0.0066 16.3 0.2 1.8 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF39778 - 0.002 17.5 0.3 0.006 16.1 0.2 1.8 2 0 0 2 2 2 1 EF hand CorA PF01544.18 ORF39474 - 3.2e-11 43.1 5.4 3.4e-11 43.0 5.4 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein DUF3043 PF11241.8 ORF39474 - 0.36 10.9 2.2 0.41 10.7 2.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) DUF1611 PF07755.11 ORF39052 - 0.18 11.1 0.1 0.18 11.1 0.1 1.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1611_C) P-loop domain DUF809 PF05663.11 ORF38520 - 0.33 11.1 0.3 0.33 11.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Acyl-CoA_dh_1 PF00441.24 ORF37887 - 1.7e-06 28.3 0.1 1.8e-06 28.3 0.1 1.0 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Ca_hom_mod PF14798.6 ORF37815 - 0.0014 17.8 0.5 0.0014 17.8 0.5 1.0 1 0 0 1 1 1 1 Calcium homeostasis modulator zf-RVT PF13966.6 ORF37287 - 0.068 13.9 1.4 0.081 13.6 1.4 1.1 1 0 0 1 1 1 0 zinc-binding in reverse transcriptase Rtt106_N PF18215.1 ORF36543 - 0.016 14.9 0.0 0.019 14.7 0.0 1.1 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain Neprosin_AP PF14365.6 ORF3639 - 0.026 15.0 0.0 0.029 14.9 0.0 1.1 1 0 0 1 1 1 0 Neprosin activation peptide zf-C2HC PF01530.18 ORF36365 - 0.016 15.4 4.7 0.03 14.5 4.7 1.4 1 0 0 1 1 1 0 Zinc finger, C2HC type Myticin-prepro PF10690.9 ORF3610 - 0.058 13.6 3.9 0.06 13.6 3.9 1.1 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel TSSC4 PF15264.6 ORF35964 - 0.028 14.7 0.3 0.04 14.2 0.3 1.2 1 0 0 1 1 1 0 Tumour suppressing sub-chromosomal transferable candidate 4 zf-ribbon_3 PF13248.6 ORF34784 - 0.083 12.3 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 zinc-ribbon domain T4-Gluco-transf PF09198.10 ORF34765 - 0.017 14.7 1.0 0.023 14.3 0.9 1.3 1 1 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase ACT PF01842.25 ORF34765 - 0.073 12.9 0.1 0.11 12.3 0.1 1.4 1 1 0 1 1 1 0 ACT domain Pox_A3L PF05288.11 ORF34765 - 0.12 12.4 0.7 0.37 10.8 0.3 1.7 1 1 0 1 1 1 0 Poxvirus A3L Protein DASH_Duo1 PF08651.10 ORF34683 - 0.14 12.0 0.1 0.19 11.5 0.1 1.2 1 0 0 1 1 1 0 DASH complex subunit Duo1 Coprogen_oxidas PF01218.18 ORF34683 - 0.16 10.7 0.7 0.17 10.5 0.7 1.1 1 0 0 1 1 1 0 Coproporphyrinogen III oxidase Profilin PF00235.19 ORF3456 - 0.18 12.0 0.0 0.22 11.8 0.0 1.0 1 0 0 1 1 1 0 Profilin Corazonin PF17308.2 ORF34521 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin ENOD40 PF08247.11 ORF34467 - 1.6 8.9 8.5 4.7 7.4 1.1 2.6 2 1 0 2 2 2 0 ENOD40 protein DUF2520 PF10728.9 ORF33339 - 0.19 11.5 0.0 0.19 11.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2520) Ost4 PF10215.9 ORF33300 - 0.016 15.0 0.5 0.024 14.4 0.5 1.3 1 0 0 1 1 1 0 Oligosaccaryltransferase DSL PF01414.19 ORF32680 - 0.13 12.6 3.8 0.24 11.7 3.9 1.6 1 1 1 2 2 2 0 Delta serrate ligand Ogr_Delta PF04606.12 ORF32585 - 0.0098 15.9 0.3 0.014 15.4 0.3 1.2 1 0 0 1 1 1 1 Ogr/Delta-like zinc finger LRV_FeS PF05484.11 ORF32393 - 0.059 13.4 7.7 0.078 13.0 7.7 1.2 1 0 0 1 1 1 0 LRV protein FeS4 cluster Med25 PF11232.8 ORF32354 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF32354 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein ACT_5 PF13710.6 ORF32150 - 0.023 14.5 0.1 0.029 14.2 0.1 1.3 1 1 0 1 1 1 0 ACT domain HALZ PF02183.18 ORF31498 - 0.00042 20.5 6.2 0.00069 19.8 0.9 2.4 2 1 0 2 2 2 1 Homeobox associated leucine zipper YscO PF07321.12 ORF31498 - 0.001 19.1 3.2 0.0012 18.8 3.2 1.1 1 0 0 1 1 1 1 Type III secretion protein YscO CDH1_2_SANT_HL1 PF18375.1 ORF31498 - 0.055 14.2 3.0 0.066 13.9 3.0 1.1 1 0 0 1 1 1 0 CDH1/2 SANT-Helical linker 1 IFT57 PF10498.9 ORF31498 - 0.056 12.4 6.0 0.062 12.3 6.0 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 DUF4250 PF14056.6 ORF31498 - 0.11 12.5 2.6 0.19 11.7 1.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4250) T4-Gluco-transf PF09198.10 ORF30859 - 0.017 14.7 1.0 0.023 14.3 0.9 1.3 1 1 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase ACT PF01842.25 ORF30859 - 0.073 12.9 0.1 0.11 12.3 0.1 1.4 1 1 0 1 1 1 0 ACT domain Pox_A3L PF05288.11 ORF30859 - 0.12 12.4 0.7 0.37 10.8 0.3 1.7 1 1 0 1 1 1 0 Poxvirus A3L Protein HCV_NS2 PF01538.18 ORF30531 - 0.021 14.5 0.5 0.023 14.4 0.5 1.0 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS2 Tmemb_9 PF05434.11 ORF30445 - 0.19 11.6 3.3 0.22 11.4 3.3 1.0 1 0 0 1 1 1 0 TMEM9 Herpes_LMP1 PF05297.11 ORF30445 - 2.5 7.2 6.1 2.3 7.3 6.1 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) adh_short PF00106.25 ORF30259 - 0.011 15.2 0.0 0.012 15.1 0.0 1.0 1 0 0 1 1 1 0 short chain dehydrogenase PglL_A PF15864.5 ORF30259 - 0.27 11.0 0.9 0.43 10.3 0.9 1.3 1 0 0 1 1 1 0 Protein glycosylation ligase S-antigen PF05756.11 ORF30244 - 0.43 11.0 6.1 0.5 10.8 6.1 1.1 1 0 0 1 1 1 0 S-antigen protein Arena_nucleocap PF00843.17 ORF29114 - 0.019 13.9 0.1 0.019 13.9 0.1 1.0 1 0 0 1 1 1 0 Arenavirus nucleocapsid N-terminal domain TIMELESS PF04821.14 ORF29114 - 0.054 12.8 0.2 0.056 12.7 0.2 1.1 1 0 0 1 1 1 0 Timeless protein WD40 PF00400.32 ORF28369 - 3.9e-07 30.6 0.0 6e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 WD domain, G-beta repeat SCAMP PF04144.13 ORF27747 - 0.087 13.1 3.3 0.1 12.9 3.3 1.0 1 0 0 1 1 1 0 SCAMP family NADH-G_4Fe-4S_3 PF10588.9 ORF2745 - 0.15 11.6 0.1 0.27 10.8 0.1 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Corazonin PF17308.2 ORF27387 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin DUF3585 PF12130.8 ORF26805 - 0.061 13.5 0.0 0.07 13.3 0.0 1.1 1 0 0 1 1 1 0 Bivalent Mical/EHBP Rab binding domain RSRP PF17069.5 ORF25804 - 0.048 13.2 8.0 0.05 13.2 8.0 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 CH_2 PF06294.11 ORF25101 - 0.0017 18.4 0.1 0.0019 18.3 0.1 1.1 1 0 0 1 1 1 1 CH-like domain in sperm protein DUF1964 PF09244.10 ORF24728 - 0.12 12.8 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1964) Baculo_11_kDa PF06143.11 ORF23733 - 9.4 5.9 8.2 0.44 10.2 1.0 1.9 1 1 1 2 2 2 0 Baculovirus 11 kDa family zf-C2HC_2 PF13913.6 ORF23561 - 0.069 13.1 0.7 0.13 12.2 0.7 1.5 1 0 0 1 1 1 0 zinc-finger of a C2HC-type B12D PF06522.11 ORF23112 - 0.44 10.4 1.2 0.61 9.9 1.2 1.2 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit DUF3950 PF13132.6 ORF22765 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) Myb_DNA-bind_6 PF13921.6 ORF22613 - 0.025 14.8 0.2 0.032 14.5 0.2 1.2 1 0 0 1 1 1 0 Myb-like DNA-binding domain DUF3010 PF11215.8 ORF22613 - 0.08 13.3 1.8 0.079 13.3 1.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3010) Imm58 PF15581.6 ORF22381 - 0.073 13.2 0.0 0.079 13.1 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 58 T3SS_LEE_assoc PF13327.6 ORF22381 - 0.12 12.3 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Type III secretion system subunit Fz PF01392.22 ORF22066 - 0.045 14.4 0.4 0.053 14.1 0.4 1.1 1 0 0 1 1 1 0 Fz domain DUF5522 PF17653.1 ORF21195 - 0.0052 16.7 1.2 0.0052 16.7 1.2 1.5 2 0 0 2 2 2 1 Family of unknown function (DUF5522) STELLO PF03385.17 ORF20816 - 0.004 16.0 0.4 0.0041 16.0 0.4 1.0 1 0 0 1 1 1 1 STELLO glycosyltransferases UPF1_Zn_bind PF09416.10 ORF20816 - 0.031 14.2 0.3 0.035 14.1 0.3 1.0 1 0 0 1 1 1 0 RNA helicase (UPF2 interacting domain) TrkA_TMD PF18613.1 ORF20201 - 7.4 6.1 6.0 25 4.4 0.3 2.4 2 0 0 2 2 2 0 Tyrosine kinase receptor A trans-membrane domain zf-RING_4 PF14570.6 ORF19932 - 1.3 8.8 11.7 1.4 8.8 2.6 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RanBP PF00641.18 ORF1977 - 1.4e-07 30.7 5.3 3.9e-07 29.3 1.2 2.1 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others C1_2 PF03107.16 ORF1977 - 0.046 14.0 1.5 0.046 14.0 1.5 2.0 2 0 0 2 2 2 0 C1 domain Cytochrome_C7 PF14522.6 ORF1977 - 0.051 13.6 5.6 0.068 13.2 5.6 1.2 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c NCD3G PF07562.14 ORF1977 - 0.07 13.1 8.1 0.81 9.7 3.5 2.1 1 1 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR zinc-ribbon_6 PF10005.9 ORF1977 - 0.21 12.3 6.5 0.31 11.7 2.1 2.0 1 1 1 2 2 2 0 zinc-ribbon domain DZR PF12773.7 ORF1977 - 0.23 11.5 10.0 1.8 8.6 10.1 2.0 1 1 0 1 1 1 0 Double zinc ribbon MqsA_antitoxin PF15731.5 ORF1977 - 0.34 11.0 3.5 0.19 11.9 0.6 1.7 1 1 1 2 2 2 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA zf-CCHC PF00098.23 ORF1977 - 0.58 10.3 0.6 0.58 10.3 0.6 3.1 3 0 0 3 3 3 0 Zinc knuckle zinc_ribbon_2 PF13240.6 ORF1977 - 0.59 9.9 10.9 6.5 6.6 5.5 2.6 2 1 0 2 2 2 0 zinc-ribbon domain zf-Mss51 PF13824.6 ORF1977 - 0.71 10.0 8.1 18 5.5 3.3 3.0 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 YhfH PF14149.6 ORF1977 - 1 9.4 8.3 4.1 7.5 3.5 2.3 2 0 0 2 2 2 0 YhfH-like protein zf-C2H2_3 PF13878.6 ORF1977 - 1.1 9.2 8.0 0.31 10.9 1.7 2.4 2 1 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO HypA PF01155.19 ORF1977 - 1.3 9.1 7.9 0.16 12.0 2.7 1.8 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HalOD2 PF18547.1 ORF1977 - 9.8 6.2 13.2 2.2e+03 -1.4 13.3 2.8 1 1 0 1 1 1 0 Halobacterial output domain 2 DUF543 PF04418.12 ORF1971 - 0.11 12.5 0.6 0.15 12.1 0.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF543) Folliculin PF11704.8 ORF19309 - 0.095 12.6 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport DUF2721 PF11026.8 ORF19302 - 0.15 12.0 0.1 0.17 11.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Corazonin PF17308.2 ORF17353 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin Sec15 PF04091.12 ORF17274 - 0.0037 16.7 0.4 0.0037 16.7 0.4 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like Bact_transglu_N PF08379.10 ORF17195 - 0.14 13.1 1.6 0.19 12.7 1.3 1.3 1 1 0 1 1 1 0 Bacterial transglutaminase-like N-terminal region DUF4295 PF14128.6 ORF16395 - 0.086 12.7 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4295) zf-FLZ PF04570.14 ORF1625 - 0.6 9.6 5.9 0.67 9.5 1.7 2.1 2 0 0 2 2 2 0 zinc-finger of the FCS-type, C2-C2 DX PF01666.17 ORF16188 - 0.0099 16.3 0.1 0.011 16.1 0.1 1.1 1 0 0 1 1 1 1 DX module TMIE PF16038.5 ORF16130 - 1.1 9.1 6.0 3.7 7.5 6.0 1.8 1 1 0 1 1 1 0 TMIE protein GSK-3_bind PF05350.12 ORF15894 - 0.2 10.9 0.0 0.21 10.9 0.0 1.1 1 0 0 1 1 1 0 Glycogen synthase kinase-3 binding HscB_4_cys PF18256.1 ORF15341 - 0.027 14.3 0.7 0.027 14.3 0.7 1.5 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif Herpes_UL49_5 PF05702.11 ORF15341 - 0.073 13.2 0.0 0.074 13.1 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein Polyketide_cyc PF03364.20 ORF152758 - 7.7e-06 26.1 0.0 9.4e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport LSR PF05624.14 ORF152662 - 1.1 9.3 9.8 0.2 11.7 4.4 2.0 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) Toxin_30 PF08117.11 ORF152423 - 0.0026 18.0 1.2 0.0042 17.3 1.2 1.5 1 0 0 1 1 1 1 Ptu family DUF3797 PF12677.7 ORF152021 - 0.037 13.9 0.5 0.062 13.2 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3797) Peptidase_S30 PF01577.16 ORF152013 - 0.012 15.2 0.0 0.013 15.1 0.0 1.0 1 0 0 1 1 1 0 Potyvirus P1 protease Fer4_4 PF12800.7 ORF151705 - 3.1 8.5 6.9 0.37 11.4 1.3 2.3 3 1 0 3 3 3 0 4Fe-4S binding domain Methyltransf_2 PF00891.18 ORF151043 - 0.11 11.8 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 O-methyltransferase domain DUF3439 PF11921.8 ORF150606 - 3.6 7.6 14.5 4.6 7.2 14.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) B277 PF17623.2 ORF150606 - 8.2 5.4 7.3 9.4 5.2 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function PIG-Y PF15159.6 ORF150606 - 8.6 7.4 7.0 14 6.6 1.7 2.1 1 1 1 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y Cofilin_ADF PF00241.20 ORF149650 - 1.9e-06 27.7 0.1 2.3e-06 27.4 0.1 1.1 1 0 0 1 1 1 1 Cofilin/tropomyosin-type actin-binding protein Phos_pyr_kin PF08543.12 ORF149650 - 0.16 11.4 0.0 0.16 11.4 0.0 1.0 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Corazonin PF17308.2 ORF148963 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin Med25 PF11232.8 ORF147829 - 0.026 14.5 0.0 0.026 14.5 0.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 25 PTOV activation and synapsin 2 ZapD PF07072.11 ORF147829 - 0.03 14.1 0.0 0.034 13.9 0.0 1.0 1 0 0 1 1 1 0 Cell division protein Bowman-Birk_leg PF00228.20 ORF147772 - 0.17 12.3 0.5 0.17 12.3 0.5 2.1 2 0 0 2 2 2 0 Bowman-Birk serine protease inhibitor family zf-piccolo PF05715.13 ORF147491 - 4.1e-05 23.7 3.5 4.8e-05 23.4 3.5 1.1 1 0 0 1 1 1 1 Piccolo Zn-finger IBR PF01485.21 ORF147491 - 0.0091 16.2 6.3 0.014 15.6 6.3 1.4 1 1 0 1 1 1 1 IBR domain, a half RING-finger domain PHD PF00628.29 ORF147491 - 0.051 13.5 5.9 0.074 13.0 5.9 1.2 1 0 0 1 1 1 0 PHD-finger FYVE_2 PF02318.16 ORF147491 - 0.078 13.2 3.9 0.086 13.1 3.9 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger Acyltransf_C PF16076.5 ORF14727 - 0.00033 20.7 0.4 0.00094 19.2 0.4 1.8 1 1 0 1 1 1 1 Acyltransferase C-terminus ClpB_D2-small PF10431.9 ORF14712 - 2.2e-05 24.5 0.0 2.5e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein Cullin_Nedd8 PF10557.9 ORF146287 - 0.044 13.8 1.7 0.05 13.7 1.7 1.2 1 0 0 1 1 1 0 Cullin protein neddylation domain HECA PF15353.6 ORF145868 - 0.0079 16.4 0.7 0.0086 16.3 0.7 1.1 1 0 0 1 1 1 1 Headcase protein family homologue PilW PF16074.5 ORF145366 - 0.13 12.2 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Type IV Pilus-assembly protein W Nipped-B_C PF12830.7 ORF145273 - 0.087 12.8 0.0 0.093 12.7 0.0 1.0 1 0 0 1 1 1 0 Sister chromatid cohesion C-terminus DUF2258 PF10015.9 ORF145273 - 0.1 12.7 0.5 0.13 12.4 0.5 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2258) COX7C PF02935.16 ORF14476 - 0.24 11.7 2.8 0.32 11.3 2.8 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc Nt_Gln_amidase PF09764.9 ORF144704 - 0.12 11.9 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 N-terminal glutamine amidase DUF3096 PF11295.8 ORF144327 - 0.089 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3096) DUF4732 PF15876.5 ORF144244 - 0.15 12.1 0.1 0.16 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4732) DUF3950 PF13132.6 ORF144208 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) TIP39 PF14980.6 ORF144092 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 TIP39 peptide Tmemb_18A PF09771.9 ORF144019 - 0.089 13.2 0.1 0.1 13.0 0.1 1.2 1 0 0 1 1 1 0 Transmembrane protein 188 CENP-N PF05238.13 ORF144019 - 0.2 10.9 0.6 0.21 10.8 0.6 1.0 1 0 0 1 1 1 0 Kinetochore protein CHL4 like PIH1_CS PF18201.1 ORF143699 - 0.067 13.6 0.0 0.072 13.5 0.0 1.1 1 0 0 1 1 1 0 PIH1 CS-like domain DUF2318 PF10080.9 ORF143012 - 0.8 9.9 0.1 0.8 9.9 0.1 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) SICA_C PF12879.7 ORF142563 - 0.048 13.7 0.0 0.052 13.6 0.0 1.1 1 0 0 1 1 1 0 SICA C-terminal inner membrane domain Corazonin PF17308.2 ORF142513 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin L51_S25_CI-B8 PF05047.16 ORF142298 - 5.7e-05 22.9 0.0 7.2e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain zinc_ribbon_16 PF17034.5 ORF142227 - 0.01 16.1 0.0 0.01 16.1 0.0 1.1 1 0 0 1 1 1 0 Zinc-ribbon like family DUF4271 PF14093.6 ORF142116 - 0.014 15.3 13.2 0.015 15.2 13.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) EBA-175_VI PF11556.8 ORF142061 - 0.0055 17.0 0.8 0.0057 17.0 0.8 1.2 1 0 0 1 1 1 1 Erythrocyte binding antigen 175 Ntox1 PF15500.6 ORF141975 - 0.15 12.4 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Putative RNase-like toxin, toxin_1 DUF366 PF04017.12 ORF141828 - 0.019 14.4 0.3 0.019 14.4 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF366) zf-ACC PF17848.1 ORF141815 - 0.089 12.9 0.3 0.089 12.9 0.3 1.7 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Lipl32 PF12103.8 ORF141807 - 0.14 11.8 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Surface lipoprotein of Spirochaetales order LEDGF PF11467.8 ORF141687 - 0.022 14.4 0.1 0.027 14.1 0.1 1.2 1 0 0 1 1 1 0 Lens epithelium-derived growth factor (LEDGF) PAS_5 PF07310.13 ORF141626 - 0.034 13.9 0.0 0.045 13.5 0.0 1.1 1 0 0 1 1 1 0 PAS domain 7TM_GPCR_Srab PF10292.9 ORF141053 - 0.11 11.3 2.3 0.12 11.3 2.3 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR receptor class ab chemoreceptor EF-hand_6 PF13405.6 ORF140531 - 4.4e-05 23.1 0.1 0.00012 21.7 0.1 1.8 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF140531 - 4.5e-05 22.7 0.5 8.5e-05 21.9 0.1 1.7 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF140531 - 0.00014 22.2 0.2 0.0002 21.8 0.2 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF140531 - 0.00052 19.4 0.1 0.001 18.5 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF140531 - 0.0032 17.3 0.3 0.0046 16.8 0.3 1.4 1 1 0 1 1 1 1 EF-hand domain pair Caleosin PF05042.13 ORF140531 - 0.06 13.3 0.1 0.062 13.2 0.1 1.2 1 0 0 1 1 1 0 Caleosin related protein U62_UL91 PF17442.2 ORF139194 - 0.087 12.8 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins DUF1158 PF06643.11 ORF139042 - 0.092 13.3 3.6 0.11 13.0 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1158) Colipase-like PF15083.6 ORF139007 - 0.16 12.1 4.6 0.36 11.0 1.4 1.9 1 1 1 2 2 2 0 Colipase-like UL141 PF16758.5 ORF138561 - 0.083 12.6 0.0 0.092 12.5 0.0 1.0 1 0 0 1 1 1 0 Herpes-like virus membrane glycoprotein UL141 DUF1582 PF07621.11 ORF138550 - 0.092 12.7 1.8 0.16 11.9 1.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1582) Alg14 PF08660.11 ORF138523 - 0.066 13.1 0.0 0.073 13.0 0.0 1.0 1 0 0 1 1 1 0 Oligosaccharide biosynthesis protein Alg14 like TAFH PF07531.14 ORF137996 - 0.011 15.8 0.1 0.017 15.2 0.0 1.3 1 1 0 1 1 1 0 NHR1 homology to TAF NPCC PF08058.11 ORF137727 - 0.17 11.9 0.8 0.18 11.9 0.8 1.1 1 0 0 1 1 1 0 Nuclear pore complex component Shisa PF13908.6 ORF137175 - 0.021 15.1 0.2 0.021 15.1 0.2 1.0 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator COX7C PF02935.16 ORF137013 - 0.24 11.7 2.8 0.32 11.3 2.8 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIIc MAGE_N PF12440.8 ORF135706 - 0.53 11.0 5.0 0.56 10.9 5.0 1.1 1 0 0 1 1 1 0 Melanoma associated antigen family N terminal DUF443 PF04276.12 ORF135618 - 0.0041 17.0 5.6 0.0042 16.9 5.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF443) ECF_trnsprt PF12822.7 ORF134942 - 0.03 14.4 0.0 0.03 14.4 0.0 1.0 1 0 0 1 1 1 0 ECF transporter, substrate-specific component Trefoil PF00088.18 ORF134821 - 0.083 12.8 1.8 0.23 11.4 1.8 1.7 1 1 0 1 1 1 0 Trefoil (P-type) domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks445.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks445.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks445.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks445.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:48:31 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PDZ_assoc PF10600.9 ORF134648 - 0.17 12.7 0.1 0.31 11.9 0.1 1.4 1 0 0 1 1 1 0 PDZ-associated domain of NMDA receptors DUF2025 PF09634.10 ORF13462 - 0.18 11.8 0.1 0.27 11.3 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2025) DUF3585 PF12130.8 ORF134566 - 0.061 13.5 0.0 0.07 13.3 0.0 1.1 1 0 0 1 1 1 0 Bivalent Mical/EHBP Rab binding domain DUF1727 PF08353.10 ORF134273 - 0.07 13.1 0.0 0.076 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1727) Collectrin PF16959.5 ORF13425 - 0.037 13.8 0.2 0.038 13.8 0.2 1.1 1 0 0 1 1 1 0 Renal amino acid transporter DUF1514 PF07438.11 ORF134165 - 2.4 8.1 6.3 0.45 10.4 1.1 2.2 1 1 2 3 3 3 0 Protein of unknown function (DUF1514) HisKA_2 PF07568.12 ORF132756 - 0.14 12.3 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Histidine kinase Benyvirus_P25 PF05744.11 ORF132108 - 0.049 12.9 0.2 0.056 12.7 0.2 1.0 1 0 0 1 1 1 0 Benyvirus P25/P26 protein SCIMP PF15050.6 ORF131958 - 0.0067 16.9 2.6 0.0068 16.9 2.6 1.2 1 0 0 1 1 1 1 SCIMP protein DUF1072 PF06380.11 ORF131854 - 2.3 8.1 12.8 2.9 7.9 11.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1072) Cpta_toxin PF07254.12 ORF13046 - 4.6 7.2 10.1 5.7 6.9 10.1 1.2 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system 7TM_GPCR_Srx PF10328.9 ORF130190 - 0.016 14.8 0.9 0.016 14.8 0.9 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srx Polyketide_cyc2 PF10604.9 ORF129976 - 0.15 12.3 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport Potassium_chann PF11404.8 ORF129796 - 0.32 10.9 4.7 0.36 10.7 0.3 2.4 2 0 0 2 2 2 0 Potassium voltage-gated channel UCR_UQCRX_QCR9 PF05365.12 ORF129776 - 0.041 13.8 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like L27_2 PF09045.10 ORF12962 - 0.0039 17.1 0.2 0.0048 16.8 0.2 1.2 1 0 0 1 1 1 1 L27_2 ERGIC_N PF13850.6 ORF129594 - 0.045 14.1 0.2 0.052 13.9 0.2 1.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Synthase_beta PF11421.8 ORF128506 - 0.28 11.9 7.5 0.088 13.5 4.0 2.0 1 1 1 2 2 2 0 ATP synthase F1 beta subunit RHH_3 PF12651.7 ORF128500 - 0.0011 18.9 0.1 0.0015 18.4 0.1 1.2 1 0 0 1 1 1 1 Ribbon-helix-helix domain Syntaxin_2 PF14523.6 ORF128500 - 0.027 14.8 0.4 0.031 14.6 0.4 1.1 1 0 0 1 1 1 0 Syntaxin-like protein OrfB_IS605 PF01385.19 ORF128500 - 0.11 12.7 2.3 0.12 12.7 2.3 1.0 1 0 0 1 1 1 0 Probable transposase DUF3463 PF11946.8 ORF128500 - 0.13 12.1 0.5 0.13 12.1 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) OS-D PF03392.13 ORF127455 - 0.0059 16.7 1.0 0.0061 16.6 1.0 1.1 1 0 0 1 1 1 1 Insect pheromone-binding family, A10/OS-D SurA_N PF09312.11 ORF127455 - 0.016 15.3 0.0 0.018 15.1 0.0 1.0 1 0 0 1 1 1 0 SurA N-terminal domain Inhibitor_I68 PF10468.9 ORF126579 - 0.027 14.9 2.0 0.031 14.7 2.0 1.1 1 0 0 1 1 1 0 Carboxypeptidase inhibitor I68 PaaB PF06243.11 ORF126466 - 0.055 13.7 0.1 0.055 13.7 0.1 1.2 1 0 0 1 1 1 0 Phenylacetic acid degradation B NUMOD1 PF07453.13 ORF126446 - 0.13 12.6 0.1 1.3 9.4 0.0 2.1 2 0 0 2 2 2 0 NUMOD1 domain DUF1084 PF06454.11 ORF126181 - 0.014 14.8 0.1 0.014 14.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DDE_Tnp_2 PF04693.12 ORF126181 - 0.13 11.5 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 MFA1_2 PF17317.2 ORF126181 - 0.22 11.3 1.8 0.36 10.6 1.8 1.2 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 Peptidase_C65 PF10275.9 ORF125995 - 0.037 13.5 0.5 0.039 13.4 0.5 1.1 1 0 0 1 1 1 0 Peptidase C65 Otubain ATP-synt_S1 PF05827.12 ORF12590 - 0.065 13.1 0.4 0.069 13.0 0.4 1.2 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) DUF3332 PF11810.8 ORF124554 - 0.53 9.9 4.1 0.61 9.7 4.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3332) RAD51_interact PF15696.5 ORF124250 - 0.041 14.0 0.5 8.3 6.6 0.1 2.3 2 0 0 2 2 2 0 RAD51 interacting motif Corazonin PF17308.2 ORF124223 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin ADH_zinc_N_2 PF13602.6 ORF124056 - 0.0041 18.2 0.1 0.0044 18.1 0.1 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase G2F PF07474.12 ORF124056 - 0.062 13.1 0.0 0.065 13.0 0.0 1.1 1 0 0 1 1 1 0 G2F domain Mito_carr PF00153.27 ORF123941 - 1.2e-07 31.5 0.0 1.3e-07 31.4 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial carrier protein NPR2 PF06218.11 ORF123932 - 0.035 12.9 0.2 0.036 12.8 0.2 1.0 1 0 0 1 1 1 0 Nitrogen permease regulator 2 Corazonin PF17308.2 ORF123399 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin DUF5118 PF17162.4 ORF123035 - 0.056 13.3 0.6 0.11 12.4 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5118) Fer4_20 PF14691.6 ORF12290 - 0.077 12.8 3.7 0.27 11.0 4.2 1.6 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Corazonin PF17308.2 ORF122435 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin 7tm_6 PF02949.20 ORF122249 - 0.037 13.1 0.1 0.037 13.1 0.1 1.0 1 0 0 1 1 1 0 7tm Odorant receptor Corazonin PF17308.2 ORF121813 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin Chitin_synth_2 PF03142.15 ORF121555 - 0.016 13.8 0.0 0.017 13.7 0.0 1.0 1 0 0 1 1 1 0 Chitin synthase p47_phox_C PF08944.11 ORF121167 - 0.029 13.8 2.0 0.048 13.1 2.0 1.3 1 0 0 1 1 1 0 NADPH oxidase subunit p47Phox, C terminal domain Glycoprotein_G PF00802.19 ORF121167 - 0.063 12.6 0.3 0.063 12.6 0.3 1.2 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G DUF585 PF04522.12 ORF120315 - 0.1 12.2 0.0 0.1 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF585) DnaJ_CXXCXGXG PF00684.19 ORF120313 - 0.00028 21.2 15.4 0.0017 18.7 3.8 2.1 1 1 1 2 2 2 2 DnaJ central domain FYVE_2 PF02318.16 ORF120313 - 0.17 12.1 8.4 0.2 11.9 8.4 1.2 1 0 0 1 1 1 0 FYVE-type zinc finger DUF3950 PF13132.6 ORF119539 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) EBP PF05241.12 ORF119384 - 0.065 12.7 0.6 0.068 12.6 0.6 1.0 1 0 0 1 1 1 0 Emopamil binding protein DUF4359 PF14271.6 ORF119252 - 0.066 14.0 0.0 0.077 13.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4359) Phg_2220_C PF09524.10 ORF118604 - 0.032 14.3 0.1 0.063 13.4 0.1 1.5 1 1 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) Gemini_AL2 PF01440.16 ORF117856 - 2.3 8.7 6.5 2.4 8.6 6.5 1.4 1 0 0 1 1 1 0 Geminivirus AL2 protein COA2 PF17051.5 ORF116956 - 0.11 12.5 0.2 0.14 12.2 0.2 1.3 1 1 0 1 1 1 0 Cytochrome C oxidase assembly factor 2 T4-Gluco-transf PF09198.10 ORF116536 - 0.017 14.7 1.0 0.023 14.3 0.9 1.3 1 1 0 1 1 1 0 Bacteriophage T4 beta-glucosyltransferase ACT PF01842.25 ORF116536 - 0.073 12.9 0.1 0.11 12.3 0.1 1.4 1 1 0 1 1 1 0 ACT domain Pox_A3L PF05288.11 ORF116536 - 0.12 12.4 0.7 0.37 10.8 0.3 1.7 1 1 0 1 1 1 0 Poxvirus A3L Protein GT-D PF08759.11 ORF116265 - 0.035 13.8 0.1 0.036 13.7 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase GT-D fold DUF1802 PF08819.11 ORF115945 - 0.08 12.8 0.1 0.08 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1802) DUF1765 PF08578.10 ORF11573 - 0.006 17.0 4.1 0.0076 16.7 4.1 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1765) PMAIP1 PF15150.6 ORF11546 - 0.047 13.5 0.1 0.078 12.9 0.1 1.4 1 0 0 1 1 1 0 Phorbol-12-myristate-13-acetate-induced NCD3G PF07562.14 ORF115255 - 0.32 11.0 2.6 0.43 10.6 1.0 1.9 1 1 1 2 2 2 0 Nine Cysteines Domain of family 3 GPCR DUF3524 PF12038.8 ORF115222 - 0.14 11.9 0.0 0.16 11.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3524) zf-piccolo PF05715.13 ORF114468 - 4.7 7.4 9.5 9.1 6.5 9.5 1.8 1 1 0 1 1 1 0 Piccolo Zn-finger UNC-79 PF14776.6 ORF114197 - 0.65 8.7 2.7 0.66 8.7 2.7 1.0 1 0 0 1 1 1 0 Cation-channel complex subunit UNC-79 FOXP-CC PF16159.5 ORF113821 - 0.049 14.3 0.1 0.053 14.2 0.1 1.1 1 0 0 1 1 1 0 FOXP coiled-coil domain Fer4_12 PF13353.6 ORF113206 - 0.16 12.3 0.4 0.22 11.8 0.4 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain SWIM PF04434.17 ORF113066 - 3.2 7.5 14.5 1.7 8.4 4.9 2.7 2 2 0 2 2 2 0 SWIM zinc finger RE_EcoO109I PF14511.6 ORF112181 - 0.18 11.4 0.0 0.2 11.3 0.0 1.0 1 0 0 1 1 1 0 Type II restriction endonuclease EcoO109I CTV_P33 PF07184.11 ORF111614 - 0.03 13.4 1.5 0.03 13.4 1.5 1.0 1 0 0 1 1 1 0 Citrus tristeza virus P33 protein DUF1084 PF06454.11 ORF111513 - 0.014 14.8 0.1 0.014 14.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1084) DDE_Tnp_2 PF04693.12 ORF111513 - 0.13 11.5 0.1 0.13 11.5 0.1 1.1 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 MFA1_2 PF17317.2 ORF111513 - 0.22 11.3 1.8 0.36 10.6 1.8 1.2 1 0 0 1 1 1 0 Mating hormone A-factor 1&2 Plexin_cytopl PF08337.12 ORF111197 - 0.023 13.4 0.1 0.023 13.4 0.1 1.1 1 0 0 1 1 1 0 Plexin cytoplasmic RasGAP domain Presenilin PF01080.17 ORF110991 - 0.025 13.4 2.9 0.024 13.4 2.9 1.0 1 0 0 1 1 1 0 Presenilin DUF3144 PF11342.8 ORF110196 - 0.066 13.5 1.2 0.1 12.9 1.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3144) Herpes_UL3 PF03369.13 ORF110096 - 0.075 13.6 0.0 0.081 13.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL3 protein DUF1263 PF06882.12 ORF10912 - 0.014 15.4 0.1 0.017 15.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1263) RNase_T PF00929.24 ORF10899 - 3.5e-08 34.2 0.0 3.8e-08 34.0 0.0 1.0 1 0 0 1 1 1 1 Exonuclease M16C_assoc PF08367.11 ORF10899 - 0.12 11.4 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 Peptidase M16C associated DUF3950 PF13132.6 ORF108472 - 0.17 11.6 1.0 0.37 10.6 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3950) DUF241 PF03087.14 ORF108244 - 0.08 12.8 0.0 0.085 12.7 0.0 1.0 1 0 0 1 1 1 0 Arabidopsis protein of unknown function TrbC PF04956.13 ORF108244 - 0.098 12.9 0.2 0.19 11.9 0.2 1.6 1 1 0 1 1 1 0 TrbC/VIRB2 family zinc_ribbon_12 PF11331.8 ORF107994 - 0.02 14.7 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Probable zinc-ribbon domain Corazonin PF17308.2 ORF107794 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin DUF3667 PF12412.8 ORF106571 - 0.079 12.5 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) VEGF_C PF14554.6 ORF105198 - 0.015 15.4 0.9 0.088 12.9 1.1 1.9 1 1 1 2 2 2 0 VEGF heparin-binding domain MerR PF00376.23 ORF104110 - 0.13 12.1 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 MerR family regulatory protein DUF678 PF05077.12 ORF103920 - 0.01 16.0 0.3 0.016 15.3 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF678) CBP_BcsR PF10945.8 ORF103566 - 2.4e-22 78.1 0.9 3e-22 77.8 0.9 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsR CBP_BcsO PF17037.5 ORF103566 - 0.0044 17.2 0.1 0.0051 17.0 0.1 1.1 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsO CxC1 PF18802.1 ORF10346 - 0.017 15.2 0.5 0.017 15.2 0.5 1.0 1 0 0 1 1 1 0 CxC1 like cysteine cluster associated with KDZ transposases HOK_GEF PF01848.16 ORF103385 - 6.7e-17 60.6 1.5 8.1e-17 60.4 1.5 1.1 1 0 0 1 1 1 1 Hok/gef family Corazonin PF17308.2 ORF103358 - 0.074 13.4 0.0 0.082 13.3 0.0 1.2 1 0 0 1 1 1 0 Pro-corazonin DUF4431 PF14485.6 ORF102921 - 8.5 6.3 7.5 0.87 9.4 2.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) Vps36-NZF-N PF16988.5 ORF102901 - 0.05 13.0 0.1 0.073 12.5 0.1 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain BssS PF13991.6 ORF102452 - 0.089 12.9 1.4 1.4 9.1 0.0 2.6 2 1 1 3 3 3 0 BssS protein family DUF4554 PF15091.6 ORF101836 - 0.021 13.7 0.5 0.024 13.6 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) DpnII-MboI PF18742.1 ORF100952 - 0.027 14.1 0.2 0.027 14.1 0.2 1.0 1 0 0 1 1 1 0 REase_DpnII-MboI Subtilosin_A PF11420.8 ORF100741 - 0.012 15.5 1.1 0.02 14.9 0.3 1.7 1 1 1 2 2 2 0 Bacteriocin subtilosin A DUF5457 PF17540.2 NODE_89322_length_181_cov_0.821918_g81381_i0forward_frame_1 - 0.15 12.1 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5457) Pox_A14 PF05767.12 NODE_89321_length_181_cov_0.821918_g81380_i0reverse_frame_1 - 0.0032 17.6 0.6 0.0039 17.3 0.6 1.1 1 0 0 1 1 1 1 Poxvirus virion envelope protein A14 TPR_4 PF07721.14 NODE_89320_length_181_cov_0.821918_g81379_i0forward_frame_1 - 0.096 13.4 1.2 0.29 11.9 1.2 1.8 1 1 0 1 1 1 0 Tetratricopeptide repeat Metallophos PF00149.28 NODE_89320_length_181_cov_0.821918_g81379_i0forward_frame_1 - 0.11 12.9 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase Lamprin PF06403.11 NODE_89313_length_181_cov_0.876712_g81372_i0forward_frame_1 - 0.027 14.4 2.6 0.03 14.3 2.6 1.1 1 0 0 1 1 1 0 Lamprin DUF520 PF04461.13 NODE_89311_length_181_cov_0.904110_g81370_i0reverse_frame_1 - 0.092 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF520) DUF2990 PF11693.8 NODE_89310_length_181_cov_0.904110_g81369_i0forward_frame_1 - 0.19 11.9 0.0 0.24 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) DUF4597 PF15366.6 NODE_89308_length_181_cov_0.910959_g81367_i0reverse_frame_1 - 0.11 12.3 1.2 0.15 11.8 1.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4597) ATP-synt_S1 PF05827.12 NODE_89302_length_181_cov_0.965753_g81361_i0forward_frame_1 - 0.12 12.2 0.7 0.14 12.0 0.7 1.1 1 0 0 1 1 1 0 Vacuolar ATP synthase subunit S1 (ATP6S1) Ribosomal_S11 PF00411.19 NODE_89301_length_181_cov_0.972603_g81360_i0reverse_frame_1 - 0.045 14.2 0.0 0.05 14.0 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S11 L_protein_N PF15518.6 NODE_89298_length_181_cov_0.986301_g81357_i0reverse_frame_1 - 0.11 12.3 0.1 0.14 12.0 0.1 1.4 1 1 0 1 1 1 0 L protein N-terminus ThrE_2 PF12821.7 NODE_89297_length_181_cov_0.993151_g81356_i0reverse_frame_1 - 0.027 14.6 0.0 0.027 14.6 0.0 1.1 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE Aldo_ket_red PF00248.21 NODE_89294_length_181_cov_1.000000_g81353_i0forward_frame_1 - 0.00061 19.1 0.0 0.00061 19.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Ion_trans PF00520.31 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_1 - 0.0098 15.1 2.7 0.01 15.1 2.7 1.0 1 0 0 1 1 1 1 Ion transport protein Phage_C PF12025.8 NODE_89273_length_181_cov_1.075342_g81332_i0reverse_frame_1 - 0.023 14.6 0.0 0.028 14.3 0.0 1.3 1 0 0 1 1 1 0 Phage protein C Herpes_UL17 PF04559.12 NODE_89270_length_181_cov_1.075342_g81329_i0reverse_frame_1 - 0.086 11.6 0.2 0.097 11.5 0.2 1.0 1 0 0 1 1 1 0 Herpesvirus UL17 protein Exotox-A_bind PF09101.10 NODE_89268_length_181_cov_1.075342_g81327_i0reverse_frame_1 - 0.18 11.1 1.3 0.17 11.2 1.3 1.1 1 0 0 1 1 1 0 Exotoxin A binding HD_6 PF18019.1 NODE_89266_length_181_cov_1.082192_g81325_i0forward_frame_1 - 0.11 12.6 0.2 0.12 12.5 0.2 1.1 1 0 0 1 1 1 0 HD domain Ephrin_rec_like PF07699.13 NODE_89265_length_181_cov_1.082192_g81324_i0reverse_frame_1 - 1.4e-05 24.8 5.8 1.4e-05 24.8 5.8 2.1 1 1 1 2 2 2 2 Putative ephrin-receptor like zf-RRN7 PF11781.8 NODE_89265_length_181_cov_1.082192_g81324_i0reverse_frame_1 - 0.033 13.9 1.3 0.033 13.9 1.3 2.8 3 0 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 TNFR_c6 PF00020.18 NODE_89265_length_181_cov_1.082192_g81324_i0reverse_frame_1 - 0.045 14.2 16.6 1.1 9.7 1.0 2.6 1 1 2 3 3 3 0 TNFR/NGFR cysteine-rich region zf-MYND PF01753.18 NODE_89265_length_181_cov_1.082192_g81324_i0reverse_frame_1 - 0.48 10.5 14.1 1.8 8.7 3.7 2.3 1 1 1 2 2 2 0 MYND finger DUF3328 PF11807.8 NODE_89264_length_181_cov_1.082192_g81323_i0forward_frame_1 - 0.22 11.3 0.6 0.25 11.1 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) HemY_N PF07219.13 NODE_89264_length_181_cov_1.082192_g81323_i0forward_frame_1 - 0.31 11.3 1.6 0.33 11.2 1.6 1.1 1 0 0 1 1 1 0 HemY protein N-terminus PHD_2 PF13831.6 NODE_89260_length_181_cov_1.082192_g81319_i0forward_frame_1 - 0.018 14.6 3.9 0.034 13.7 3.9 1.5 1 1 0 1 1 1 0 PHD-finger TMEM208_SND2 PF05620.11 NODE_89250_length_181_cov_1.089041_g81309_i0forward_frame_1 - 0.52 10.1 3.1 0.62 9.8 3.1 1.2 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 MBOAT PF03062.19 NODE_89248_length_181_cov_1.089041_g81307_i0reverse_frame_1 - 2.4e-10 40.3 0.0 2.7e-10 40.1 0.0 1.0 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family zf-P11 PF03854.14 NODE_89248_length_181_cov_1.089041_g81307_i0reverse_frame_1 - 0.048 13.3 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 P-11 zinc finger Atg31 PF09795.9 NODE_89242_length_181_cov_1.089041_g81301_i0reverse_frame_1 - 0.094 12.7 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 Autophagy-related protein 31 Eno-Rase_NADH_b PF12242.8 NODE_89242_length_181_cov_1.089041_g81301_i0forward_frame_1 - 0.14 12.0 0.1 0.21 11.4 0.1 1.3 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CmlA_N PF18456.1 NODE_89235_length_181_cov_1.089041_g81294_i0forward_frame_1 - 0.16 11.3 0.0 0.16 11.3 0.0 1.0 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain HSL_N PF06350.12 NODE_89234_length_181_cov_1.089041_g81293_i0forward_frame_1 - 0.12 11.3 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Hormone-sensitive lipase (HSL) N-terminus L_biotic_typeA PF04604.13 NODE_89224_length_181_cov_1.095890_g81283_i0reverse_frame_1 - 0.52 10.2 2.5 0.43 10.5 1.2 1.6 1 1 0 1 1 1 0 Type-A lantibiotic SVWC PF15430.6 NODE_89212_length_181_cov_1.095890_g81271_i0reverse_frame_1 - 0.052 13.8 0.1 0.058 13.7 0.1 1.2 1 0 0 1 1 1 0 Single domain von Willebrand factor type C SCA7 PF08313.12 NODE_89202_length_181_cov_1.095890_g81261_i0reverse_frame_1 - 0.067 13.1 0.1 0.1 12.5 0.1 1.3 1 0 0 1 1 1 0 SCA7, zinc-binding domain ArfGap PF01412.18 NODE_89198_length_181_cov_1.095890_g81257_i0forward_frame_1 - 0.13 12.3 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Serum_albumin PF00273.20 NODE_89196_length_181_cov_1.095890_g81255_i0reverse_frame_1 - 0.067 13.0 0.1 0.073 12.8 0.1 1.1 1 0 0 1 1 1 0 Serum albumin family DUF3742 PF12553.8 NODE_89195_length_181_cov_1.095890_g81254_i0forward_frame_1 - 0.031 14.4 2.4 0.037 14.1 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) DUF4282 PF14110.6 NODE_89195_length_181_cov_1.095890_g81254_i0forward_frame_1 - 0.16 12.7 6.0 0.19 12.5 6.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4282) DUF3447 PF11929.8 NODE_89193_length_181_cov_1.095890_g81252_i0forward_frame_1 - 0.023 14.6 0.2 0.029 14.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3447) Phage_lysis PF03245.13 NODE_89162_length_181_cov_1.095890_g81221_i0forward_frame_1 - 0.11 12.6 1.0 0.19 11.9 0.6 1.5 1 1 1 2 2 2 0 Bacteriophage Rz lysis protein ABC_export PF16962.5 NODE_89147_length_181_cov_1.095890_g81206_i0forward_frame_1 - 0.22 9.9 0.3 0.22 9.9 0.3 1.0 1 0 0 1 1 1 0 Putative ABC exporter CholecysA-Rec_N PF09193.10 NODE_89137_length_181_cov_1.109589_g81196_i0reverse_frame_1 - 0.073 13.1 0.1 0.099 12.6 0.1 1.2 1 0 0 1 1 1 0 Cholecystokinin A receptor, N-terminal AP2 PF00847.20 NODE_89132_length_181_cov_1.143836_g81191_i0forward_frame_1 - 1 9.6 4.1 1.6 9.0 4.1 1.5 1 1 0 1 1 1 0 AP2 domain DUF4217 PF13959.6 NODE_89127_length_181_cov_1.157534_g81186_i0forward_frame_1 - 0.091 13.0 0.2 0.14 12.4 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4217) GT-D PF08759.11 NODE_89119_length_181_cov_1.184932_g81178_i0forward_frame_1 - 0.061 13.0 1.6 0.063 13.0 1.6 1.0 1 0 0 1 1 1 0 Glycosyltransferase GT-D fold Tir_receptor_C PF07489.11 NODE_89115_length_181_cov_1.198630_g81174_i0reverse_frame_1 - 1.2 9.1 6.3 1.2 9.0 6.3 1.0 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) C-terminus TMEM173 PF15009.6 NODE_89108_length_181_cov_1.226027_g81167_i0reverse_frame_1 - 0.097 11.8 0.3 0.1 11.7 0.3 1.0 1 0 0 1 1 1 0 Transmembrane protein 173 EF-hand_9 PF14658.6 NODE_89098_length_181_cov_1.246575_g81157_i0reverse_frame_1 - 0.12 12.7 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain DUF5634_N PF18672.1 NODE_89097_length_181_cov_1.246575_g81156_i0reverse_frame_1 - 0.11 12.2 0.2 0.11 12.2 0.2 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5634) Atrophin-1 PF03154.15 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_1 - 0.018 13.3 5.6 0.019 13.3 5.6 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_1 - 0.18 11.8 5.8 0.19 11.7 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Herpes_US9 PF06072.11 NODE_89087_length_181_cov_1.280822_g81146_i0reverse_frame_1 - 0.0047 16.8 0.4 0.006 16.4 0.4 1.2 1 0 0 1 1 1 1 Alphaherpesvirus tegument protein US9 RPT PF13446.6 NODE_89085_length_181_cov_1.280822_g81144_i0reverse_frame_1 - 0.083 12.8 0.2 0.12 12.3 0.2 1.4 1 0 0 1 1 1 0 A repeated domain in UCH-protein NICE-1 PF15845.5 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 0.38 11.6 5.7 0.6 10.9 5.7 1.3 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family Mito_fiss_reg PF05308.11 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 0.62 10.1 3.1 0.6 10.1 3.1 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator DEC-1_N PF04625.13 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 1.2 8.1 7.3 1.1 8.2 7.3 1.0 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region CAP_N PF01213.19 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 1.3 8.5 4.7 1.3 8.5 4.7 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Glycoprotein PF03409.15 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_1 - 5.8 5.7 6.6 5.8 5.7 6.6 1.0 1 0 0 1 1 1 0 Transmembrane glycoprotein ACAS_N PF16177.5 NODE_89067_length_181_cov_1.349315_g81126_i0reverse_frame_1 - 0.26 11.2 5.7 0.15 12.0 3.6 1.7 1 1 1 2 2 2 0 Acetyl-coenzyme A synthetase N-terminus zf-RING_UBOX PF13445.6 NODE_89066_length_181_cov_1.349315_g81125_i0forward_frame_1 - 0.2 11.7 1.8 0.28 11.2 1.8 1.2 1 0 0 1 1 1 0 RING-type zinc-finger SRP19 PF01922.17 NODE_89063_length_181_cov_1.349315_g81122_i0reverse_frame_1 - 0.0077 17.1 0.0 0.0085 17.0 0.0 1.0 1 0 0 1 1 1 1 SRP19 protein RIF5_SNase_2 PF18189.1 NODE_89063_length_181_cov_1.349315_g81122_i0forward_frame_1 - 0.0099 15.7 0.0 0.011 15.6 0.0 1.0 1 0 0 1 1 1 1 TbRIF5 SNase domain 2 DUF1573 PF07610.11 NODE_89057_length_181_cov_1.363014_g81116_i0forward_frame_1 - 0.084 12.9 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1573) DSPc PF00782.20 NODE_89051_length_181_cov_1.369863_g81110_i0reverse_frame_1 - 1.3e-13 50.9 0.2 1.5e-13 50.7 0.2 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 NODE_89051_length_181_cov_1.369863_g81110_i0reverse_frame_1 - 3.3e-05 23.6 0.0 3.7e-05 23.4 0.0 1.0 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Myotub-related PF06602.14 NODE_89051_length_181_cov_1.369863_g81110_i0reverse_frame_1 - 0.013 14.4 0.0 0.014 14.4 0.0 1.0 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain PTPlike_phytase PF14566.6 NODE_89051_length_181_cov_1.369863_g81110_i0reverse_frame_1 - 0.086 12.9 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Inositol hexakisphosphate PET10 PF17316.2 NODE_89047_length_181_cov_1.369863_g81106_i0forward_frame_1 - 0.056 13.0 0.5 0.055 13.0 0.5 1.0 1 0 0 1 1 1 0 Petite colonies protein 10 Ank_2 PF12796.7 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 1.4e-05 25.6 0.1 2.1e-05 25.0 0.1 1.3 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 8.2e-05 22.9 1.2 0.017 15.5 0.4 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 0.00019 21.6 0.3 0.073 13.4 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 0.00026 21.2 0.2 0.097 13.3 0.1 2.3 2 1 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 0.0003 21.3 0.7 0.0022 18.5 0.7 1.9 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Cyclotide PF03784.13 NODE_89044_length_181_cov_1.369863_g81103_i0forward_frame_1 - 0.17 12.0 2.5 0.45 10.6 0.1 2.4 3 0 0 3 3 3 0 Cyclotide family DUF4844 PF16133.5 NODE_89042_length_181_cov_1.369863_g81101_i0reverse_frame_1 - 0.012 16.1 0.4 0.013 16.0 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4844) Pox_E10 PF04805.12 NODE_89040_length_181_cov_1.369863_g81099_i0forward_frame_1 - 0.1 12.5 1.1 0.11 12.4 1.1 1.2 1 0 0 1 1 1 0 E10-like protein conserved region Phage_FRD3 PF05798.11 NODE_89039_length_181_cov_1.383562_g81098_i0forward_frame_1 - 0.031 14.5 0.0 0.037 14.3 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage FRD3 protein DUF3828 PF12883.7 NODE_89035_length_181_cov_1.397260_g81094_i0reverse_frame_1 - 0.085 13.2 0.1 0.095 13.1 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3828) VKG_Carbox PF05090.14 NODE_89035_length_181_cov_1.397260_g81094_i0forward_frame_1 - 0.085 11.7 0.9 0.084 11.7 0.9 1.0 1 0 0 1 1 1 0 Vitamin K-dependent gamma-carboxylase PDDEXK_5 PF11645.8 NODE_89034_length_181_cov_1.397260_g81093_i0reverse_frame_1 - 0.042 13.8 0.2 0.05 13.6 0.2 1.2 1 0 0 1 1 1 0 PD-(D/E)XK endonuclease ubiquitin PF00240.23 NODE_89028_length_181_cov_1.404110_g81087_i0reverse_frame_1 - 0.00058 19.6 0.3 0.23 11.2 0.1 2.1 2 0 0 2 2 2 2 Ubiquitin family TNFR_c6 PF00020.18 NODE_89021_length_181_cov_1.458904_g81080_i0reverse_frame_1 - 0.12 12.7 1.5 0.55 10.7 0.6 2.0 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region p47_phox_C PF08944.11 NODE_89013_length_181_cov_1.486301_g81072_i0forward_frame_1 - 0.14 11.6 0.4 0.2 11.1 0.4 1.2 1 0 0 1 1 1 0 NADPH oxidase subunit p47Phox, C terminal domain Hairy_orange PF07527.13 NODE_89004_length_181_cov_1.527397_g81063_i0reverse_frame_1 - 0.038 14.2 0.5 0.75 10.0 0.5 2.2 2 0 0 2 2 2 0 Hairy Orange DUF1087 PF06465.13 NODE_89003_length_181_cov_1.527397_g81062_i0reverse_frame_1 - 0.043 13.9 0.0 0.054 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1087) Glyco_transf_20 PF00982.21 NODE_89000_length_181_cov_1.534247_g81059_i0forward_frame_1 - 3.3e-10 39.2 0.0 3.5e-10 39.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 UL41A PF17591.2 NODE_88987_length_181_cov_1.575342_g81046_i0forward_frame_1 - 0.19 11.8 7.1 0.25 11.5 7.1 1.2 1 0 0 1 1 1 0 Herpesvirus UL41A Actin PF00022.19 NODE_88983_length_181_cov_1.602740_g81042_i0reverse_frame_1 - 2.9e-10 39.3 0.1 3e-10 39.3 0.1 1.0 1 0 0 1 1 1 1 Actin ALP_N PF17989.1 NODE_88983_length_181_cov_1.602740_g81042_i0reverse_frame_1 - 0.082 13.1 0.0 0.091 12.9 0.0 1.1 1 0 0 1 1 1 0 Actin like proteins N terminal domain VSP PF03302.13 NODE_88976_length_181_cov_1.623288_g81035_i0forward_frame_1 - 0.0021 17.0 17.1 0.0024 16.8 17.1 1.1 1 0 0 1 1 1 1 Giardia variant-specific surface protein HTH_25 PF13413.6 NODE_88973_length_181_cov_1.623288_g81032_i0forward_frame_1 - 0.13 12.2 0.0 1 9.3 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain SPATA9 PF15824.5 NODE_88960_length_181_cov_1.636986_g81019_i0forward_frame_1 - 0.35 10.1 1.6 0.36 10.1 1.6 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 9 Tail_VII PF17091.5 NODE_88957_length_181_cov_1.636986_g81016_i0forward_frame_1 - 0.062 13.2 0.2 0.097 12.6 0.2 1.3 1 0 0 1 1 1 0 Inovirus G7P protein FGAR-AT_linker PF18072.1 NODE_88947_length_181_cov_1.643836_g81006_i0reverse_frame_1 - 0.0039 17.7 1.5 0.0052 17.3 1.5 1.6 1 1 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain Tegument_dsDNA PF12818.7 NODE_88943_length_181_cov_1.643836_g81002_i0reverse_frame_1 - 0.17 11.0 0.0 0.19 10.8 0.0 1.0 1 0 0 1 1 1 0 dsDNA viral tegument protein Hormone_5 PF00184.17 NODE_88941_length_181_cov_1.643836_g81000_i0reverse_frame_1 - 0.1 13.5 5.1 0.11 13.3 5.1 1.1 1 0 0 1 1 1 0 Neurohypophysial hormones, C-terminal Domain PDCD2_C PF04194.13 NODE_88934_length_181_cov_1.650685_g80993_i0forward_frame_1 - 0.064 13.3 0.0 0.064 13.3 0.0 1.0 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain IFT57 PF10498.9 NODE_88933_length_181_cov_1.657534_g80992_i0reverse_frame_1 - 0.011 14.7 0.0 0.012 14.6 0.0 1.0 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 KIX_2 PF16987.5 NODE_88933_length_181_cov_1.657534_g80992_i0reverse_frame_1 - 0.015 15.3 0.1 0.017 15.1 0.1 1.1 1 0 0 1 1 1 0 KIX domain Borrelia_REV PF03978.13 NODE_88933_length_181_cov_1.657534_g80992_i0reverse_frame_1 - 0.06 13.3 0.1 0.071 13.1 0.1 1.0 1 0 0 1 1 1 0 Borrelia burgdorferi REV protein SWIRM-assoc_2 PF16496.5 NODE_88931_length_181_cov_1.664384_g80990_i0reverse_frame_1 - 0.075 11.9 6.0 0.071 12.0 6.0 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal Doppel PF11466.8 NODE_88930_length_181_cov_1.664384_g80989_i0reverse_frame_1 - 0.27 10.9 2.6 0.42 10.3 2.6 1.3 1 0 0 1 1 1 0 Prion-like protein Doppel DUF4256 PF14066.6 NODE_88926_length_181_cov_1.684932_g80985_i0forward_frame_1 - 0.04 13.6 0.2 0.082 12.6 0.2 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4256) RRXRR PF14239.6 NODE_88925_length_181_cov_1.684932_g80984_i0reverse_frame_1 - 0.052 13.4 3.5 0.057 13.3 3.5 1.1 1 0 0 1 1 1 0 RRXRR protein ANF_receptor PF01094.28 NODE_88920_length_181_cov_1.705479_g80979_i0reverse_frame_1 - 0.028 13.5 0.2 0.031 13.4 0.2 1.0 1 0 0 1 1 1 0 Receptor family ligand binding region DUF4219 PF13961.6 NODE_88920_length_181_cov_1.705479_g80979_i0forward_frame_1 - 0.99 9.1 4.0 0.28 10.9 0.9 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4219) Bee_toxin PF17454.2 NODE_88914_length_181_cov_1.726027_g80973_i0reverse_frame_1 - 0.0066 16.4 1.5 0.012 15.7 1.5 1.4 1 0 0 1 1 1 1 Honey bee toxin DUF2526 PF10735.9 NODE_88913_length_181_cov_1.732877_g80972_i0reverse_frame_1 - 9.3e-15 54.6 3.7 1.1e-14 54.3 3.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2526) zf-dskA_traR PF01258.17 NODE_88913_length_181_cov_1.732877_g80972_i0reverse_frame_1 - 0.0061 16.5 0.0 0.01 15.7 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger ABC_tran PF00005.27 NODE_88910_length_181_cov_1.746575_g80969_i0forward_frame_1 - 9.8e-09 35.8 0.0 1.1e-08 35.7 0.0 1.0 1 0 0 1 1 1 1 ABC transporter Sdh5 PF03937.16 NODE_88907_length_181_cov_1.767123_g80966_i0forward_frame_1 - 0.045 13.7 0.1 0.064 13.2 0.1 1.2 1 0 0 1 1 1 0 Flavinator of succinate dehydrogenase COBRA PF04833.15 NODE_88897_length_181_cov_1.808219_g80956_i0reverse_frame_1 - 0.17 11.8 0.6 0.19 11.6 0.6 1.0 1 0 0 1 1 1 0 COBRA-like protein ubiquitin PF00240.23 NODE_88895_length_181_cov_1.808219_g80954_i0forward_frame_1 - 0.0014 18.3 0.0 0.0019 17.9 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_5 PF18037.1 NODE_88895_length_181_cov_1.808219_g80954_i0forward_frame_1 - 0.084 13.2 0.0 0.088 13.2 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-like domain CASP_C PF08172.12 NODE_88888_length_181_cov_1.842466_g80947_i0forward_frame_1 - 0.066 12.5 0.0 0.067 12.5 0.0 1.0 1 0 0 1 1 1 0 CASP C terminal MqsA_antitoxin PF15731.5 NODE_88881_length_181_cov_1.890411_g80940_i0reverse_frame_1 - 0.07 13.2 0.0 0.075 13.1 0.0 1.0 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks446.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks446.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks446.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks446.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Interferon PF00143.19 NODE_88868_length_181_cov_1.938356_g80927_i0reverse_frame_1 - 0.03 14.5 0.0 0.03 14.5 0.0 1.0 1 0 0 1 1 1 0 Interferon alpha/beta domain Rax2 PF12768.7 NODE_88864_length_181_cov_1.972603_g80923_i0forward_frame_1 - 0.23 10.9 0.5 0.24 10.9 0.5 1.0 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Arteri_Gl PF00951.18 NODE_88864_length_181_cov_1.972603_g80923_i0forward_frame_1 - 7.8 6.3 8.6 8.2 6.2 8.6 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF4234 PF14018.6 NODE_88858_length_181_cov_2.054795_g80917_i0forward_frame_1 - 0.037 14.2 0.1 0.079 13.1 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4234) TMEM154 PF15102.6 NODE_88855_length_181_cov_2.116438_g80914_i0forward_frame_1 - 0.0011 18.8 1.1 0.0013 18.7 1.1 1.0 1 0 0 1 1 1 1 TMEM154 protein family DUF4064 PF13273.6 NODE_88855_length_181_cov_2.116438_g80914_i0forward_frame_1 - 0.0042 17.4 0.6 0.0047 17.2 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4064) Podoplanin PF05808.11 NODE_88855_length_181_cov_2.116438_g80914_i0forward_frame_1 - 0.008 16.3 1.2 0.0092 16.1 1.2 1.1 1 0 0 1 1 1 1 Podoplanin EssA PF10661.9 NODE_88855_length_181_cov_2.116438_g80914_i0forward_frame_1 - 0.016 15.0 1.1 0.019 14.8 1.1 1.0 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA PRA1 PF03208.19 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 0.39 10.3 11.6 0.41 10.3 11.6 1.0 1 0 0 1 1 1 0 PRA1 family protein DUF2207 PF09972.9 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 0.56 8.9 4.1 0.56 8.9 4.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF1700 PF08006.11 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 0.67 9.5 8.7 0.6 9.6 8.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF1129 PF06570.11 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 1.4 8.3 5.8 1.4 8.3 5.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Mid2 PF04478.12 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 2.1 8.1 6.1 2.7 7.8 6.1 1.3 1 0 0 1 1 1 0 Mid2 like cell wall stress sensor UL45 PF05473.12 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 2.2 7.9 5.6 2.4 7.7 5.6 1.1 1 0 0 1 1 1 0 UL45 protein, carbohydrate-binding C-type lectin-like DUF3040 PF11239.8 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 2.3 8.6 15.9 2.8 8.3 15.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF4231 PF14015.6 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 2.6 8.5 7.7 2.9 8.4 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) Amnionless PF14828.6 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_1 - 3.4 6.4 7.0 4.5 6.0 7.0 1.3 1 0 0 1 1 1 0 Amnionless DUF3966 PF13110.6 NODE_88838_length_181_cov_2.205479_g80897_i0forward_frame_1 - 0.13 12.2 0.5 0.64 10.0 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3966) DUF2256 PF10013.9 NODE_88836_length_181_cov_2.226027_g80895_i0forward_frame_1 - 0.099 12.8 0.5 0.099 12.8 0.5 2.1 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) Mei4 PF13971.6 NODE_88833_length_181_cov_2.273973_g80892_i0reverse_frame_1 - 0.055 13.0 0.1 0.058 12.9 0.1 1.0 1 0 0 1 1 1 0 Meiosis-specific protein Mei4 TIG_plexin PF17960.1 NODE_88831_length_181_cov_2.301370_g80890_i0forward_frame_1 - 0.026 14.5 0.5 0.027 14.4 0.5 1.2 1 0 0 1 1 1 0 TIG domain DUF5056 PF16479.5 NODE_88830_length_181_cov_2.301370_g80889_i0forward_frame_1 - 0.13 12.5 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5056) DUF3460 PF11943.8 NODE_88823_length_181_cov_2.376712_g80882_i0reverse_frame_1 - 0.084 13.1 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3460) DsbB PF02600.16 NODE_88822_length_181_cov_2.383562_g80881_i0reverse_frame_1 - 3.5e-13 50.2 2.9 3.7e-13 50.2 2.9 1.0 1 0 0 1 1 1 1 Disulfide bond formation protein DsbB Pox_RNA_pol PF03293.14 NODE_88821_length_181_cov_2.383562_g80880_i0reverse_frame_1 - 0.036 13.8 0.2 0.036 13.8 0.2 1.1 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 18 kD subunit NUC202 PF08166.12 NODE_88821_length_181_cov_2.383562_g80880_i0forward_frame_1 - 0.052 13.6 0.9 0.062 13.4 0.9 1.2 1 1 0 1 1 1 0 NUC202 domain MraZ PF02381.18 NODE_88818_length_181_cov_2.438356_g80877_i0forward_frame_1 - 1.7e-15 56.8 0.0 1.9e-15 56.6 0.0 1.0 1 0 0 1 1 1 1 MraZ protein, putative antitoxin-like Imm39 PF15568.6 NODE_88807_length_181_cov_2.616438_g80866_i0reverse_frame_1 - 0.17 12.0 0.1 0.21 11.7 0.1 1.1 1 0 0 1 1 1 0 Immunity protein 39 CAP PF00188.26 NODE_88807_length_181_cov_2.616438_g80866_i0forward_frame_1 - 0.08 13.8 0.0 0.08 13.8 0.0 1.1 1 0 0 1 1 1 0 Cysteine-rich secretory protein family Cad PF03596.13 NODE_88788_length_181_cov_2.938356_g80847_i0forward_frame_1 - 0.029 14.3 1.9 0.028 14.3 1.9 1.1 1 0 0 1 1 1 0 Cadmium resistance transporter Lipase_3 PF01764.25 NODE_88786_length_181_cov_3.068493_g80845_i0reverse_frame_1 - 7.7e-12 45.3 0.0 8.2e-12 45.2 0.0 1.0 1 0 0 1 1 1 1 Lipase (class 3) DUF676 PF05057.14 NODE_88786_length_181_cov_3.068493_g80845_i0reverse_frame_1 - 0.0058 16.2 0.1 0.0062 16.1 0.1 1.0 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 NODE_88786_length_181_cov_3.068493_g80845_i0reverse_frame_1 - 0.0064 16.2 0.0 0.0066 16.2 0.0 1.0 1 0 0 1 1 1 1 PGAP1-like protein Palm_thioest PF02089.15 NODE_88786_length_181_cov_3.068493_g80845_i0reverse_frame_1 - 0.1 12.5 0.0 0.1 12.5 0.0 1.0 1 0 0 1 1 1 0 Palmitoyl protein thioesterase DUF3285 PF11688.8 NODE_88776_length_181_cov_3.335616_g80835_i0forward_frame_1 - 0.061 13.2 0.7 0.15 12.0 0.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3285) SPA PF08616.10 NODE_88774_length_181_cov_3.349315_g80833_i0forward_frame_1 - 0.024 14.6 0.1 0.024 14.6 0.1 1.0 1 0 0 1 1 1 0 Stabilization of polarity axis DUF1509 PF07420.11 NODE_88773_length_181_cov_3.424658_g80832_i0forward_frame_1 - 0.3 10.0 1.6 0.31 10.0 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) LrgB PF04172.16 NODE_88771_length_181_cov_3.568493_g80830_i0reverse_frame_1 - 3e-20 72.7 0.7 3.1e-20 72.6 0.7 1.0 1 0 0 1 1 1 1 LrgB-like family BssB_TutG PF18512.1 NODE_88759_length_181_cov_8.363014_g80818_i0reverse_frame_1 - 0.067 13.1 0.0 0.091 12.7 0.0 1.4 1 0 0 1 1 1 0 Benzylsuccinate synthase beta subunit HnRNP_M PF11532.8 NODE_88756_length_181_cov_13.554795_g80815_i0reverse_frame_1 - 1.1 9.6 6.9 1.6 9.0 6.9 1.3 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein M DUF4820 PF16091.5 NODE_88754_length_181_cov_14.815068_g80813_i0forward_frame_1 - 0.098 12.0 0.9 0.1 11.9 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) COX6C PF02937.15 NODE_88749_length_181_cov_18.671233_g80808_i0forward_frame_1 - 0.012 15.8 0.1 0.014 15.5 0.1 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc SesA PF17107.5 NODE_88739_length_181_cov_23.698630_g80798_i0reverse_frame_1 - 0.039 14.1 0.1 0.042 14.0 0.1 1.0 1 0 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases SR-25 PF10500.9 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 0.11 12.1 19.2 0.1 12.2 19.2 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Conotoxin PF02950.17 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 0.64 11.1 4.4 0.78 10.8 4.4 1.3 1 0 0 1 1 1 0 Conotoxin Med19 PF10278.9 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 1.6 8.6 15.5 1.7 8.6 15.5 1.1 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Ferlin_C PF16165.5 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 3.3 7.6 10.4 3.5 7.6 10.4 1.1 1 0 0 1 1 1 0 Ferlin C-terminus Rrn6 PF10214.9 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_1 - 4.5 5.6 12.5 4.9 5.5 12.5 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor CBP_BcsF PF11120.8 NODE_88736_length_181_cov_25.719178_g80795_i0reverse_frame_1 - 0.15 12.2 0.2 0.17 12.0 0.2 1.2 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF DUF3108 PF11306.8 NODE_88736_length_181_cov_25.719178_g80795_i0forward_frame_1 - 0.033 14.2 0.0 0.034 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3108) Zf_RING PF16744.5 NODE_88733_length_181_cov_27.410959_g80792_i0forward_frame_1 - 0.0033 17.5 0.8 0.0045 17.1 0.8 1.2 1 0 0 1 1 1 1 KIAA1045 RING finger DUF1440 PF07274.12 NODE_88718_length_181_cov_38.554795_g80777_i0forward_frame_1 - 0.94 9.8 4.6 0.94 9.8 4.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1440) DUF4131 PF13567.6 NODE_88718_length_181_cov_38.554795_g80777_i0forward_frame_1 - 4 7.1 4.9 4.1 7.0 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3043 PF11241.8 NODE_88718_length_181_cov_38.554795_g80777_i0forward_frame_1 - 8.1 6.4 5.2 8.7 6.3 5.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Pelovaterin PF17859.1 NODE_88713_length_181_cov_42.500000_g80772_i0forward_frame_1 - 0.036 14.3 0.9 0.066 13.5 0.2 1.7 1 1 1 2 2 2 0 Pelovaterin SLAC1 PF03595.17 NODE_88712_length_181_cov_42.904110_g80771_i0reverse_frame_1 - 0.065 12.5 7.0 0.073 12.3 7.0 1.0 1 0 0 1 1 1 0 Voltage-dependent anion channel Zn_ribbon_recom PF13408.6 NODE_88710_length_181_cov_44.671233_g80769_i0reverse_frame_1 - 0.0076 16.7 0.4 0.0076 16.7 0.4 1.9 1 1 1 2 2 2 1 Recombinase zinc beta ribbon domain APC_u14 PF16635.5 NODE_88708_length_181_cov_47.623288_g80767_i0forward_frame_1 - 0.036 14.6 0.0 0.04 14.5 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on APC between SAMP and APC_crr Mononeg_mRNAcap PF14318.6 NODE_88693_length_181_cov_89.287671_g80752_i0forward_frame_1 - 0.053 12.8 0.0 0.058 12.6 0.0 1.0 1 0 0 1 1 1 0 Mononegavirales mRNA-capping region V zf-RING-like PF08746.11 NODE_88681_length_181_cov_137.363014_g80740_i0forward_frame_1 - 0.78 10.1 6.4 0.31 11.4 3.7 1.7 2 0 0 2 2 2 0 RING-like domain CCP_MauG PF03150.14 NODE_88680_length_181_cov_148.089041_g80739_i0forward_frame_1 - 0.13 12.9 0.2 0.14 12.8 0.2 1.0 1 0 0 1 1 1 0 Di-haem cytochrome c peroxidase DUF3021 PF11457.8 NODE_88679_length_181_cov_153.513699_g80738_i0reverse_frame_1 - 0.035 14.4 0.6 0.038 14.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF3099 PF11298.8 NODE_88675_length_181_cov_172.027397_g80734_i0reverse_frame_1 - 0.11 12.7 0.4 0.19 11.9 0.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3099) LIDHydrolase PF10230.9 NODE_88675_length_181_cov_172.027397_g80734_i0reverse_frame_1 - 0.17 11.4 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase AFP PF02420.15 NODE_88675_length_181_cov_172.027397_g80734_i0forward_frame_1 - 1.9 9.1 5.5 47 4.8 0.2 3.3 4 0 0 4 4 4 0 Insect antifreeze protein repeat Cys_knot PF00007.22 NODE_88673_length_181_cov_195.808219_g80732_i0reverse_frame_1 - 0.042 14.1 3.5 0.05 13.9 3.5 1.0 1 0 0 1 1 1 0 Cystine-knot domain DUF4202 PF13875.6 NODE_88673_length_181_cov_195.808219_g80732_i0reverse_frame_1 - 0.16 11.9 0.1 0.16 11.9 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4202) Chlam_PMP PF02415.17 NODE_88655_length_182_cov_0.816327_g80714_i0forward_frame_1 - 0.024 15.1 3.0 0.17 12.4 0.3 2.4 2 0 0 2 2 2 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat DUF3981 PF13139.6 NODE_88654_length_182_cov_0.816327_g80713_i0forward_frame_1 - 0.079 13.3 0.5 0.087 13.2 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3981) DUF2198 PF09964.9 NODE_88654_length_182_cov_0.816327_g80713_i0forward_frame_1 - 4.2 7.5 9.5 1 9.5 2.4 2.7 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2198) Period_C PF12114.8 NODE_88647_length_182_cov_0.870748_g80706_i0reverse_frame_1 - 1.9 8.1 9.3 1.9 8.0 9.3 1.0 1 0 0 1 1 1 0 Period protein 2/3C-terminal region DUF3352 PF11832.8 NODE_88647_length_182_cov_0.870748_g80706_i0forward_frame_1 - 0.13 10.9 1.8 0.14 10.8 1.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3352) DUF1490 PF07371.12 NODE_88645_length_182_cov_0.877551_g80704_i0forward_frame_1 - 0.093 12.8 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) Ketoacyl-synt_C PF02801.22 NODE_88641_length_182_cov_0.904762_g80700_i0reverse_frame_1 - 9.5e-13 48.2 0.0 1.1e-12 48.0 0.0 1.0 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain TPR_8 PF13181.6 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 4e-05 23.5 1.4 0.00011 22.1 0.1 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 0.00025 20.7 0.0 0.00038 20.2 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 0.0009 19.2 0.0 0.0014 18.5 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 0.093 13.2 0.0 0.19 12.2 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_88636_length_182_cov_0.945578_g80695_i0reverse_frame_1 - 0.16 12.5 0.0 0.2 12.2 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat Keratin_B2 PF01500.17 NODE_88627_length_182_cov_1.020408_g80686_i0forward_frame_1 - 0.0056 16.7 0.1 0.0061 16.6 0.1 1.0 1 0 0 1 1 1 1 Keratin, high sulfur B2 protein SdpA PF17418.2 NODE_88616_length_182_cov_1.068027_g80675_i0reverse_frame_1 - 0.043 13.7 0.1 0.049 13.5 0.1 1.0 1 0 0 1 1 1 0 Sporulation delaying protein SdpA Glyco_transf_18 PF15024.6 NODE_88612_length_182_cov_1.074830_g80671_i0reverse_frame_1 - 0.028 13.0 0.1 0.031 12.9 0.1 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 zf-C6H2 PF15801.5 NODE_88612_length_182_cov_1.074830_g80671_i0forward_frame_1 - 0.54 10.6 5.4 0.13 12.5 2.3 1.6 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding PhnA_Zn_Ribbon PF08274.12 NODE_88612_length_182_cov_1.074830_g80671_i0forward_frame_1 - 6.9 6.7 8.1 55 3.8 5.5 2.4 2 1 0 2 2 2 0 PhnA Zinc-Ribbon Csm1_B PF18211.1 NODE_88607_length_182_cov_1.074830_g80666_i0reverse_frame_1 - 0.099 12.5 0.2 0.11 12.3 0.2 1.1 1 0 0 1 1 1 0 Csm1 subunit domain B zf_C2H2_ZHX PF18387.1 NODE_88607_length_182_cov_1.074830_g80666_i0reverse_frame_1 - 0.18 11.5 0.1 0.26 10.9 0.1 1.2 1 0 0 1 1 1 0 Zinc-fingers and homeoboxes C2H2 finger domain RRM_3 PF08777.11 NODE_88594_length_182_cov_1.081633_g80653_i0forward_frame_1 - 0.21 11.6 0.0 0.23 11.5 0.0 1.1 1 0 0 1 1 1 0 RNA binding motif AAA_assoc_C PF09821.9 NODE_88588_length_182_cov_1.081633_g80647_i0reverse_frame_1 - 0.057 14.0 0.1 0.072 13.6 0.1 1.0 1 0 0 1 1 1 0 C-terminal AAA-associated domain Med3 PF11593.8 NODE_88586_length_182_cov_1.081633_g80645_i0forward_frame_1 - 0.52 9.4 6.0 0.55 9.4 6.0 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Ntox17 PF15524.6 NODE_88584_length_182_cov_1.081633_g80643_i0forward_frame_1 - 0.1 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Novel toxin 17 V_ATPase_I PF01496.19 NODE_88577_length_182_cov_1.081633_g80636_i0reverse_frame_1 - 0.087 10.7 0.2 0.1 10.5 0.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Ceramidase_alk PF04734.13 NODE_88575_length_182_cov_1.081633_g80634_i0forward_frame_1 - 1.9 7.0 6.6 1.8 7.1 6.6 1.0 1 0 0 1 1 1 0 Neutral/alkaline non-lysosomal ceramidase, N-terminal zf_Hakai PF18408.1 NODE_88573_length_182_cov_1.088435_g80632_i0reverse_frame_1 - 0.22 11.2 1.9 0.45 10.3 0.2 2.1 2 0 0 2 2 2 0 C2H2 Hakai zinc finger domain DUF5549 PF17703.1 NODE_88571_length_182_cov_1.088435_g80630_i0reverse_frame_1 - 0.87 9.2 5.4 0.95 9.1 5.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5549) ABC2_membrane_2 PF12679.7 NODE_88561_length_182_cov_1.088435_g80620_i0reverse_frame_1 - 0.38 10.0 2.0 0.44 9.8 2.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Phage_holin_3_7 PF05449.11 NODE_88556_length_182_cov_1.088435_g80615_i0forward_frame_1 - 0.058 13.4 0.8 0.064 13.3 0.8 1.1 1 0 0 1 1 1 0 Putative 3TM holin, Phage_holin_3 VP4_2 PF08935.10 NODE_88550_length_182_cov_1.088435_g80609_i0reverse_frame_1 - 0.056 14.0 0.1 0.06 13.9 0.1 1.1 1 0 0 1 1 1 0 Viral protein VP4 subunit Sas6_CC PF18594.1 NODE_88547_length_182_cov_1.088435_g80606_i0reverse_frame_1 - 0.096 12.5 0.9 0.13 12.0 0.9 1.2 1 0 0 1 1 1 0 Sas6/XLF/XRCC4 coiled-coil domain Toxin_37 PF11415.8 NODE_88544_length_182_cov_1.088435_g80603_i0forward_frame_1 - 0.26 11.1 4.5 1.6 8.7 0.4 2.1 2 0 0 2 2 2 0 Antifungal peptide termicin DUF5503 PF17607.2 NODE_88539_length_182_cov_1.088435_g80598_i0reverse_frame_1 - 0.12 12.7 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5503) FBPase_2 PF06874.11 NODE_88531_length_182_cov_1.088435_g80590_i0reverse_frame_1 - 0.021 13.2 0.3 0.022 13.1 0.3 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase EF-hand_7 PF13499.6 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 1.3e-08 35.1 1.0 1.4e-08 35.0 1.0 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 2.4e-08 32.9 1.5 5.4e-08 31.8 0.2 2.0 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 1.3e-07 31.0 0.2 2e-07 30.4 0.1 1.4 1 1 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 7.2e-05 22.6 1.3 0.00046 20.0 0.1 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 0.00013 21.3 0.1 0.00023 20.5 0.1 1.4 1 0 0 1 1 1 1 EF hand Caleosin PF05042.13 NODE_88526_length_182_cov_1.088435_g80585_i0forward_frame_1 - 0.12 12.3 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Caleosin related protein DUF3657 PF12394.8 NODE_88520_length_182_cov_1.088435_g80579_i0forward_frame_1 - 0.13 12.8 3.5 0.11 13.1 1.4 1.8 1 1 1 2 2 2 0 Protein FAM135 DUF627 PF04781.12 NODE_88516_length_182_cov_1.088435_g80575_i0forward_frame_1 - 0.059 13.4 0.0 0.068 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF627) TTD PF12148.8 NODE_88515_length_182_cov_1.088435_g80574_i0forward_frame_1 - 0.0069 16.3 0.0 0.0069 16.3 0.0 1.1 1 0 0 1 1 1 1 Tandem tudor domain within UHRF1 zf-C5HC2 PF02928.16 NODE_88511_length_182_cov_1.088435_g80570_i0forward_frame_1 - 0.028 14.8 3.8 0.048 14.0 3.8 1.3 1 0 0 1 1 1 0 C5HC2 zinc finger TetR PF13972.6 NODE_88502_length_182_cov_1.088435_g80561_i0forward_frame_1 - 0.15 11.8 0.1 0.15 11.7 0.1 1.1 1 0 0 1 1 1 0 Bacterial transcriptional repressor YwqJ-deaminase PF14431.6 NODE_88498_length_182_cov_1.088435_g80557_i0reverse_frame_1 - 0.076 13.2 0.7 0.081 13.1 0.7 1.2 1 0 0 1 1 1 0 YwqJ-like deaminase DUF5423 PF17461.2 NODE_88496_length_182_cov_1.102041_g80555_i0forward_frame_1 - 0.021 13.7 0.1 0.022 13.6 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5423) Ca_hom_mod PF14798.6 NODE_88493_length_182_cov_1.108844_g80552_i0forward_frame_1 - 0.012 14.7 0.0 0.012 14.7 0.0 1.0 1 0 0 1 1 1 0 Calcium homeostasis modulator PrpF PF04303.13 NODE_88489_length_182_cov_1.136054_g80548_i0reverse_frame_1 - 0.13 11.2 0.0 0.13 11.2 0.0 1.0 1 0 0 1 1 1 0 PrpF protein Pardaxin PF07425.11 NODE_88485_length_182_cov_1.156463_g80544_i0reverse_frame_1 - 0.14 11.8 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Pardaxin DUF5541 PF17695.1 NODE_88476_length_182_cov_1.190476_g80535_i0reverse_frame_1 - 0.066 13.6 0.1 0.072 13.5 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5541) DUF5102 PF17104.5 NODE_88468_length_182_cov_1.210884_g80527_i0reverse_frame_1 - 0.025 14.7 0.1 0.027 14.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5102) PTS_EIIB PF00367.20 NODE_88466_length_182_cov_1.224490_g80525_i0forward_frame_1 - 0.068 12.7 0.4 0.13 11.8 0.4 1.4 1 0 0 1 1 1 0 phosphotransferase system, EIIB Asp4 PF16996.5 NODE_88461_length_182_cov_1.238095_g80520_i0forward_frame_1 - 0.23 11.3 1.4 0.25 11.2 0.6 1.5 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 Toxin_GhoT_OrtT PF10753.9 NODE_88453_length_182_cov_1.265306_g80512_i0reverse_frame_1 - 0.0072 16.5 0.0 0.0097 16.1 0.0 1.2 1 0 0 1 1 1 1 Toxin GhoT_OrtT Papilloma_E5A PF05776.12 NODE_88447_length_182_cov_1.272109_g80506_i0reverse_frame_1 - 0.007 16.7 0.2 0.0086 16.4 0.2 1.2 1 0 0 1 1 1 1 Papillomavirus E5A protein NOB1_Zn_bind PF08772.11 NODE_88446_length_182_cov_1.272109_g80505_i0reverse_frame_1 - 2.6e-10 40.3 3.3 2.7e-10 40.2 3.3 1.0 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like BH4 PF02180.17 NODE_88444_length_182_cov_1.272109_g80503_i0reverse_frame_1 - 0.13 12.1 0.4 0.25 11.2 0.4 1.5 1 0 0 1 1 1 0 Bcl-2 homology region 4 Thioredoxin PF00085.20 NODE_88443_length_182_cov_1.272109_g80502_i0forward_frame_1 - 0.1 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin ColG_sub PF18496.1 NODE_88441_length_182_cov_1.278912_g80500_i0forward_frame_1 - 0.021 14.9 0.6 0.043 14.0 0.5 1.5 1 1 1 2 2 2 0 Collagenase G catalytic helper subdomain Sugar_tr PF00083.24 NODE_88440_length_182_cov_1.278912_g80499_i0forward_frame_1 - 0.15 10.9 2.3 0.15 10.9 2.3 1.0 1 0 0 1 1 1 0 Sugar (and other) transporter zf-BED PF02892.15 NODE_88437_length_182_cov_1.285714_g80496_i0reverse_frame_1 - 0.049 13.7 0.2 0.12 12.4 0.2 1.7 1 1 0 1 1 1 0 BED zinc finger zf-A20 PF01754.16 NODE_88434_length_182_cov_1.285714_g80493_i0reverse_frame_1 - 0.42 10.6 0.5 0.42 10.6 0.5 2.2 2 0 0 2 2 2 0 A20-like zinc finger YgbB PF02542.16 NODE_88422_length_182_cov_1.319728_g80481_i0forward_frame_1 - 9.6e-24 84.4 2.2 1e-23 84.3 2.2 1.0 1 0 0 1 1 1 1 YgbB family Croc_4 PF17691.1 NODE_88420_length_182_cov_1.326531_g80479_i0reverse_frame_1 - 0.0097 16.0 0.4 0.011 15.7 0.4 1.2 1 0 0 1 1 1 1 Contingent replication of cDNA 4 Arc_PepC_II PF06847.11 NODE_88416_length_182_cov_1.340136_g80475_i0reverse_frame_1 - 0.12 12.9 0.4 0.17 12.4 0.1 1.4 2 0 0 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II Spt20 PF12090.8 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_1 - 0.046 13.3 13.7 0.052 13.2 13.7 1.0 1 0 0 1 1 1 0 Spt20 family ATP-synt_E PF05680.12 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_1 - 0.94 9.9 4.9 1.3 9.4 4.9 1.2 1 0 0 1 1 1 0 ATP synthase E chain Connexin PF00029.19 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_1 - 1.1 8.9 5.6 1.2 8.9 5.6 1.0 1 0 0 1 1 1 0 Connexin SelP_N PF04592.14 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_1 - 1.6 8.0 24.1 1.9 7.8 24.1 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region DUF2418 PF10332.9 NODE_88412_length_182_cov_1.346939_g80471_i0forward_frame_1 - 1.2 9.8 4.0 1.4 9.5 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2418) RINGv PF12906.7 NODE_88410_length_182_cov_1.353741_g80469_i0forward_frame_1 - 0.056 13.6 5.2 0.11 12.6 5.1 1.7 1 1 0 1 1 1 0 RING-variant domain YidD PF01809.18 NODE_88407_length_182_cov_1.353741_g80466_i0reverse_frame_1 - 0.011 15.6 0.5 0.014 15.2 0.5 1.2 1 0 0 1 1 1 0 Putative membrane protein insertion efficiency factor PHD_Oberon PF07227.11 NODE_88400_length_182_cov_1.353741_g80459_i0reverse_frame_1 - 0.00075 19.4 1.8 0.00079 19.3 1.8 1.0 1 0 0 1 1 1 1 PHD - plant homeodomain finger protein Sar8_2 PF03058.14 NODE_88400_length_182_cov_1.353741_g80459_i0reverse_frame_1 - 0.065 13.8 2.1 0.076 13.6 2.1 1.1 1 0 0 1 1 1 0 Sar8.2 family DUF5445 PF17520.2 NODE_88400_length_182_cov_1.353741_g80459_i0forward_frame_1 - 0.098 12.5 1.5 0.12 12.2 1.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5445) MNNL PF07657.13 NODE_88390_length_182_cov_1.360544_g80449_i0forward_frame_1 - 0.0046 17.0 1.1 0.0052 16.8 1.1 1.0 1 0 0 1 1 1 1 N terminus of Notch ligand zf-MYST PF17772.1 NODE_88387_length_182_cov_1.360544_g80446_i0forward_frame_1 - 0.71 9.5 7.7 3.9 7.1 0.2 2.1 1 1 1 2 2 2 0 MYST family zinc finger domain UBA_2 PF08587.11 NODE_88385_length_182_cov_1.360544_g80444_i0forward_frame_1 - 0.045 13.9 0.0 0.059 13.5 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin associated domain (UBA) Kelch_4 PF13418.6 NODE_88377_length_182_cov_1.374150_g80436_i0reverse_frame_1 - 0.009 16.0 0.0 0.014 15.4 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_88377_length_182_cov_1.374150_g80436_i0reverse_frame_1 - 0.047 14.0 0.1 1.3 9.4 0.0 2.1 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_88377_length_182_cov_1.374150_g80436_i0reverse_frame_1 - 0.093 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Kelch motif Kelch_2 PF07646.15 NODE_88377_length_182_cov_1.374150_g80436_i0reverse_frame_1 - 0.11 12.5 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Kelch motif BCLP PF12304.8 NODE_88372_length_182_cov_1.394558_g80431_i0reverse_frame_1 - 0.057 13.0 0.0 0.061 12.9 0.0 1.2 1 0 0 1 1 1 0 Beta-casein like protein DUF5406 PF17400.2 NODE_88363_length_182_cov_1.428571_g80422_i0forward_frame_1 - 0.031 14.7 0.8 0.039 14.4 0.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5406) Conotoxin_I2 PF17557.2 NODE_88361_length_182_cov_1.448980_g80420_i0forward_frame_1 - 0.055 13.6 6.2 0.088 12.9 6.2 1.3 1 0 0 1 1 1 0 I2-superfamily conotoxins Kinocilin PF15033.6 NODE_88355_length_182_cov_1.482993_g80414_i0forward_frame_1 - 0.023 14.3 0.3 0.024 14.3 0.3 1.1 1 0 0 1 1 1 0 Kinocilin protein DUF1279 PF06916.13 NODE_88352_length_182_cov_1.482993_g80411_i0forward_frame_1 - 0.071 13.7 0.6 0.08 13.5 0.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1279) YfhO PF09586.10 NODE_88352_length_182_cov_1.482993_g80411_i0forward_frame_1 - 0.15 10.2 8.6 0.16 10.2 8.6 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO RecA_dep_nuc PF16786.5 NODE_88350_length_182_cov_1.489796_g80409_i0forward_frame_1 - 0.044 13.9 0.7 0.055 13.6 0.7 1.2 1 0 0 1 1 1 0 Recombination enhancement, RecA-dependent nuclease Afi1 PF07792.12 NODE_88338_length_182_cov_1.551020_g80397_i0forward_frame_1 - 2 8.9 13.6 2.2 8.8 13.6 1.1 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking Tim54 PF11711.8 NODE_88338_length_182_cov_1.551020_g80397_i0forward_frame_1 - 3 6.5 5.3 2.8 6.6 5.3 1.0 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Zip PF02535.22 NODE_88338_length_182_cov_1.551020_g80397_i0forward_frame_1 - 6.1 6.0 5.8 6.2 5.9 5.8 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter DUF913 PF06025.12 NODE_88338_length_182_cov_1.551020_g80397_i0forward_frame_1 - 8.3 5.3 7.0 8 5.3 7.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) FCSD-flav_bind PF09242.11 NODE_88325_length_182_cov_1.598639_g80384_i0reverse_frame_1 - 0.14 12.5 0.9 0.3 11.4 0.7 1.6 1 1 1 2 2 2 0 Flavocytochrome c sulphide dehydrogenase, flavin-binding KdgT PF03812.13 NODE_88323_length_182_cov_1.598639_g80382_i0reverse_frame_1 - 0.049 12.9 0.1 0.057 12.7 0.1 1.0 1 0 0 1 1 1 0 2-keto-3-deoxygluconate permease PetN PF03742.14 NODE_88315_length_182_cov_1.619048_g80374_i0forward_frame_1 - 0.015 15.2 1.7 0.03 14.2 1.7 1.6 1 0 0 1 1 1 0 PetN TRADD_N PF09034.10 NODE_88312_length_182_cov_1.619048_g80371_i0reverse_frame_1 - 0.27 11.3 1.2 2.5 8.2 0.1 1.9 1 1 1 2 2 2 0 TRADD, N-terminal domain DUF4456 PF14644.6 NODE_88310_length_182_cov_1.619048_g80369_i0reverse_frame_1 - 0.0096 15.6 0.4 0.01 15.5 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4456) Croc_4 PF17691.1 NODE_88300_length_182_cov_1.632653_g80359_i0reverse_frame_1 - 0.01 15.9 1.1 0.01 15.9 1.1 1.0 1 0 0 1 1 1 1 Contingent replication of cDNA 4 EGF_MSP1_1 PF12946.7 NODE_88298_length_182_cov_1.632653_g80357_i0forward_frame_1 - 0.011 15.8 0.3 0.016 15.3 0.3 1.3 1 0 0 1 1 1 0 MSP1 EGF domain 1 FeThRed_A PF02941.15 NODE_88291_length_182_cov_1.632653_g80350_i0reverse_frame_1 - 0.2 11.8 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase variable alpha chain Aa_trans PF01490.18 NODE_88288_length_182_cov_1.632653_g80347_i0forward_frame_1 - 0.0011 17.8 1.2 0.0011 17.8 1.2 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF3894 PF13033.6 NODE_88288_length_182_cov_1.632653_g80347_i0forward_frame_1 - 0.05 13.7 3.0 0.066 13.3 3.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3894) Phage-tail_3 PF13550.6 NODE_88284_length_182_cov_1.632653_g80343_i0reverse_frame_1 - 0.027 14.3 0.1 0.029 14.2 0.1 1.1 1 0 0 1 1 1 0 Putative phage tail protein Hormone_3 PF00159.18 NODE_88284_length_182_cov_1.632653_g80343_i0reverse_frame_1 - 0.068 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Pancreatic hormone peptide SatRNA_48 PF17485.2 NODE_88281_length_182_cov_1.653061_g80340_i0forward_frame_1 - 0.067 12.3 0.2 0.069 12.3 0.2 1.0 1 0 0 1 1 1 0 Satellite RNA 48 kDa protein DUF3325 PF11804.8 NODE_88275_length_182_cov_1.687075_g80334_i0reverse_frame_1 - 0.13 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) GED PF02212.18 NODE_88274_length_182_cov_1.693878_g80333_i0reverse_frame_1 - 0.099 12.8 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Dynamin GTPase effector domain Agouti PF05039.12 NODE_88273_length_182_cov_1.700680_g80332_i0reverse_frame_1 - 0.13 13.0 4.0 0.13 12.9 4.0 1.1 1 0 0 1 1 1 0 Agouti protein Antistasin PF02822.14 NODE_88272_length_182_cov_1.707483_g80331_i0reverse_frame_1 - 0.091 13.4 4.8 1.7 9.3 0.8 2.5 1 1 1 2 2 2 0 Antistasin family PDR_assoc PF08370.11 NODE_88263_length_182_cov_1.768707_g80322_i0forward_frame_1 - 0.4 10.4 2.3 4.3 7.2 0.2 2.1 2 0 0 2 2 2 0 Plant PDR ABC transporter associated IL11 PF07400.11 NODE_88261_length_182_cov_1.782313_g80320_i0forward_frame_1 - 0.0066 16.1 0.0 0.007 16.0 0.0 1.1 1 0 0 1 1 1 1 Interleukin 11 AA_permease PF00324.21 NODE_88255_length_182_cov_1.829932_g80314_i0reverse_frame_1 - 8.5e-09 34.5 2.4 9e-09 34.4 2.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_88255_length_182_cov_1.829932_g80314_i0reverse_frame_1 - 4.5e-07 29.0 3.7 5.1e-07 28.9 3.7 1.0 1 0 0 1 1 1 1 Amino acid permease SCF PF02404.15 NODE_88243_length_182_cov_1.904762_g80302_i0reverse_frame_1 - 0.17 11.2 0.9 0.18 11.2 0.9 1.2 1 0 0 1 1 1 0 Stem cell factor Sterol-sensing PF12349.8 NODE_88243_length_182_cov_1.904762_g80302_i0forward_frame_1 - 0.00047 20.0 0.1 0.00048 20.0 0.1 1.0 1 0 0 1 1 1 1 Sterol-sensing domain of SREBP cleavage-activation Thermopsin PF05317.11 NODE_88238_length_182_cov_1.904762_g80297_i0reverse_frame_1 - 0.011 15.2 0.1 0.013 15.0 0.1 1.0 1 0 0 1 1 1 0 Thermopsin DUF4772 PF15997.5 NODE_88238_length_182_cov_1.904762_g80297_i0reverse_frame_1 - 0.15 12.7 0.0 0.17 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4772) Ndr PF03096.14 NODE_88236_length_182_cov_1.918367_g80295_i0reverse_frame_1 - 0.003 16.3 0.2 0.0033 16.2 0.2 1.0 1 0 0 1 1 1 1 Ndr family DUF3201 PF11447.8 NODE_88235_length_182_cov_1.918367_g80294_i0reverse_frame_1 - 0.061 12.9 0.1 0.064 12.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3201) MORN PF02493.20 NODE_88234_length_182_cov_1.931973_g80293_i0reverse_frame_1 - 1.5e-10 40.4 16.0 2.5e-05 23.9 1.8 3.3 4 0 0 4 4 4 3 MORN repeat DUF3379 PF11859.8 NODE_88233_length_182_cov_1.945578_g80292_i0reverse_frame_1 - 0.041 13.2 0.1 0.046 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3379) CHASE9 PF17153.4 NODE_88233_length_182_cov_1.945578_g80292_i0reverse_frame_1 - 0.076 13.2 0.2 0.078 13.1 0.2 1.0 1 0 0 1 1 1 0 Periplasmic sensor domain, extracellular PPC PF04151.15 NODE_88232_length_182_cov_1.952381_g80291_i0reverse_frame_1 - 7.4e-06 27.0 0.1 9.1e-06 26.7 0.1 1.0 1 0 0 1 1 1 1 Bacterial pre-peptidase C-terminal domain Trp_Tyr_perm PF03222.13 NODE_88225_length_182_cov_2.020408_g80284_i0reverse_frame_1 - 1.5e-05 24.3 2.6 1.6e-05 24.2 2.6 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF5579 PF17742.1 NODE_88225_length_182_cov_2.020408_g80284_i0reverse_frame_1 - 0.082 12.5 0.2 0.095 12.3 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5579) Sp38 PF07354.12 NODE_88221_length_182_cov_2.047619_g80280_i0reverse_frame_1 - 0.13 11.7 6.5 0.14 11.6 6.5 1.1 1 0 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) HicB PF05534.12 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_1 - 0.18 11.6 0.0 2.4 8.1 0.0 2.1 2 0 0 2 2 2 0 HicB family Beta-APP PF03494.13 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_1 - 0.19 11.6 0.0 10 6.0 0.0 2.5 3 0 0 3 3 3 0 Beta-amyloid peptide (beta-APP) PAS_5 PF07310.13 NODE_88219_length_182_cov_2.081633_g80278_i0forward_frame_1 - 0.18 11.6 0.0 0.18 11.6 0.0 1.1 1 0 0 1 1 1 0 PAS domain DUF5584 PF17822.1 NODE_88214_length_182_cov_2.115646_g80273_i0reverse_frame_1 - 0.05 13.1 1.3 0.05 13.1 1.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5584) PuR_N PF09182.10 NODE_88209_length_182_cov_2.142857_g80268_i0reverse_frame_1 - 0.042 13.8 0.1 0.06 13.3 0.1 1.2 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal Annexin PF00191.20 NODE_88207_length_182_cov_2.163265_g80266_i0reverse_frame_1 - 0.04 14.0 0.2 0.052 13.6 0.2 1.2 1 0 0 1 1 1 0 Annexin Nbas_N PF15492.6 NODE_88204_length_182_cov_2.170068_g80263_i0forward_frame_1 - 0.22 10.8 0.8 0.24 10.7 0.8 1.0 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal HscB_4_cys PF18256.1 NODE_88202_length_182_cov_2.176871_g80261_i0reverse_frame_1 - 0.12 12.3 1.6 0.18 11.6 1.6 1.2 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif GpcrRhopsn4 PF10192.9 NODE_88202_length_182_cov_2.176871_g80261_i0forward_frame_1 - 0.00015 21.3 1.6 0.00016 21.2 1.6 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain Dicty_CTDC PF00526.18 NODE_88200_length_182_cov_2.176871_g80259_i0reverse_frame_1 - 1.4 8.9 8.5 3.4 7.7 6.6 2.1 2 0 0 2 2 2 0 Dictyostelium (slime mold) repeat PPV_E1_N PF00524.18 NODE_88198_length_182_cov_2.176871_g80257_i0forward_frame_1 - 0.059 13.8 0.1 0.063 13.7 0.1 1.1 1 0 0 1 1 1 0 E1 Protein, N terminal domain Herpes_UL20 PF04544.12 NODE_88194_length_182_cov_2.272109_g80253_i0forward_frame_1 - 0.044 14.2 0.5 0.048 14.0 0.5 1.0 1 0 0 1 1 1 0 Herpesvirus egress protein UL20 Sigma70_r1_1 PF03979.14 NODE_88189_length_182_cov_2.306122_g80248_i0reverse_frame_1 - 0.0086 16.1 0.0 0.01 15.9 0.0 1.1 1 0 0 1 1 1 1 Sigma-70 factor, region 1.1 DprA_WH PF17782.1 NODE_88189_length_182_cov_2.306122_g80248_i0reverse_frame_1 - 0.035 14.2 0.7 0.044 13.9 0.7 1.2 1 0 0 1 1 1 0 DprA winged helix domain PRIMA1 PF16101.5 NODE_88189_length_182_cov_2.306122_g80248_i0reverse_frame_1 - 0.11 12.5 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 SelP_N PF04592.14 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 0.034 13.6 26.7 0.035 13.5 26.7 1.0 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Troponin-I_N PF11636.8 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 0.15 12.1 0.1 0.19 11.7 0.1 1.2 1 0 0 1 1 1 0 Troponin I residues 1-32 PriC PF07445.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 0.35 10.8 6.5 0.4 10.6 6.5 1.0 1 0 0 1 1 1 0 Primosomal replication protein priC DUF2946 PF11162.8 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 0.49 11.1 8.3 0.53 11.0 8.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) Zip PF02535.22 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 2 7.5 9.6 2 7.5 9.6 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter Macoilin PF09726.9 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_1 - 3.2 6.2 5.4 3.3 6.2 5.4 1.0 1 0 0 1 1 1 0 Macoilin family Chromosome_seg PF13889.6 NODE_88181_length_182_cov_2.442177_g80240_i0reverse_frame_1 - 0.074 13.2 0.2 0.12 12.6 0.2 1.4 1 0 0 1 1 1 0 Chromosome segregation during meiosis DUF3195 PF11424.8 NODE_88176_length_182_cov_2.462585_g80235_i0forward_frame_1 - 0.046 13.8 0.1 0.055 13.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3195) Agouti PF05039.12 NODE_88168_length_182_cov_2.510204_g80227_i0forward_frame_1 - 0.019 15.7 6.3 0.02 15.6 6.3 1.2 1 0 0 1 1 1 0 Agouti protein TMEM223 PF14640.6 NODE_88167_length_182_cov_2.517007_g80226_i0reverse_frame_1 - 0.012 15.8 0.1 0.013 15.7 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 223 Mob_synth_C PF06463.13 NODE_88138_length_182_cov_3.346939_g80197_i0reverse_frame_1 - 0.15 12.0 1.1 0.16 11.9 1.1 1.1 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C Doppel PF11466.8 NODE_88132_length_182_cov_4.210884_g80191_i0forward_frame_1 - 0.085 12.5 0.9 0.41 10.4 0.9 2.0 1 1 0 1 1 1 0 Prion-like protein Doppel ChAPs PF09295.10 NODE_88128_length_182_cov_4.619048_g80187_i0reverse_frame_1 - 0.26 10.3 0.0 0.26 10.3 0.0 1.0 1 0 0 1 1 1 0 ChAPs (Chs5p-Arf1p-binding proteins) H2O2_YaaD PF03883.14 NODE_88127_length_182_cov_4.619048_g80186_i0reverse_frame_1 - 2.9e-21 76.0 0.0 3.1e-21 75.9 0.0 1.0 1 0 0 1 1 1 1 Peroxide stress protein YaaA Dynamitin PF04912.14 NODE_88121_length_182_cov_8.210884_g80180_i0reverse_frame_1 - 0.062 12.6 1.5 0.07 12.4 1.5 1.0 1 0 0 1 1 1 0 Dynamitin DUF1534 PF07551.11 NODE_88115_length_182_cov_17.231293_g80174_i0forward_frame_1 - 0.026 14.2 0.1 0.036 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1534) TraG_N PF07916.11 NODE_88114_length_182_cov_20.156463_g80173_i0forward_frame_1 - 0.16 10.8 0.5 0.15 10.9 0.5 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region RNA_polI_A34 PF08208.11 NODE_88113_length_182_cov_20.272109_g80172_i0reverse_frame_1 - 3.7 7.6 20.1 4.1 7.4 20.1 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Casc1_N PF15927.5 NODE_88113_length_182_cov_20.272109_g80172_i0reverse_frame_1 - 8.9 5.9 22.1 11 5.6 22.1 1.1 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus Swm2 PF17083.5 NODE_88109_length_182_cov_22.319728_g80168_i0forward_frame_1 - 0.067 13.2 1.6 0.071 13.1 1.6 1.0 1 0 0 1 1 1 0 Nucleolar protein Swm2 Nitr_red_alph_N PF14710.6 NODE_88101_length_182_cov_28.721088_g80160_i0forward_frame_1 - 0.065 13.7 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 Respiratory nitrate reductase alpha N-terminal DUF1324 PF07038.11 NODE_88097_length_182_cov_30.707483_g80156_i0forward_frame_1 - 0.017 15.3 0.9 0.025 14.8 0.6 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1324) Autophagy_C PF10381.9 NODE_88091_length_182_cov_32.959184_g80150_i0forward_frame_1 - 0.012 15.1 0.2 0.025 14.1 0.2 1.6 1 0 0 1 1 1 0 Autophagocytosis associated protein C-terminal Abhydrolase_2 PF02230.16 NODE_88081_length_182_cov_36.591837_g80140_i0reverse_frame_1 - 0.085 12.7 0.0 0.09 12.6 0.0 1.1 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase CaMBD PF02888.16 NODE_88076_length_182_cov_38.993197_g80135_i0reverse_frame_1 - 0.034 14.3 0.2 0.042 14.1 0.1 1.3 1 1 0 1 1 1 0 Calmodulin binding domain HEPN_RiboL-PSP PF18735.1 NODE_88073_length_182_cov_39.653061_g80132_i0forward_frame_1 - 0.16 11.9 0.1 0.17 11.8 0.1 1.0 1 0 0 1 1 1 0 RiboL-PSP-HEPN NADHdh-2_N PF12155.8 NODE_88070_length_182_cov_44.061224_g80129_i0forward_frame_1 - 0.026 14.9 0.2 0.038 14.4 0.2 1.3 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 N-terminal Inj_translocase PF16928.5 NODE_88069_length_182_cov_44.707483_g80128_i0reverse_frame_1 - 0.09 12.2 0.9 0.084 12.3 0.9 1.0 1 0 0 1 1 1 0 DNA/protein translocase of phage P22 injectosome Cbl_N2 PF02761.14 NODE_88067_length_182_cov_46.006803_g80126_i0reverse_frame_1 - 0.025 15.3 0.1 0.027 15.2 0.1 1.1 1 0 0 1 1 1 0 CBL proto-oncogene N-terminus, EF hand-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks447.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks447.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks447.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks447.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:39:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NqrM PF04400.13 NODE_88057_length_182_cov_53.088435_g80116_i0forward_frame_1 - 8.6 6.2 8.1 35 4.2 8.1 1.9 1 1 0 1 1 1 0 (Na+)-NQR maturation NqrM Rpr2 PF04032.16 NODE_88049_length_182_cov_67.312925_g80108_i0reverse_frame_1 - 0.038 14.3 1.4 0.038 14.3 1.4 1.2 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Calc_CGRP_IAPP PF00214.19 NODE_88032_length_182_cov_141.884354_g80091_i0reverse_frame_1 - 0.08 13.3 3.3 0.084 13.2 3.3 1.1 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family IGF2_C PF08365.11 NODE_88027_length_182_cov_178.442177_g80086_i0reverse_frame_1 - 0.0012 18.8 3.1 0.34 10.9 3.1 2.6 1 1 0 1 1 1 1 Insulin-like growth factor II E-peptide Pertus-S5-tox PF09276.10 NODE_88020_length_182_cov_487.619048_g80079_i0forward_frame_1 - 0.084 12.9 0.1 0.093 12.8 0.1 1.1 1 0 0 1 1 1 0 Pertussis toxin S5 subunit Spc110_C PF18520.1 NODE_88010_length_183_cov_0.810811_g80069_i0reverse_frame_1 - 0.082 12.5 0.0 0.082 12.5 0.0 1.3 1 0 0 1 1 1 0 Spindle pole body component 110 C-terminal domain Enterotoxin_HS1 PF08090.11 NODE_88010_length_183_cov_0.810811_g80069_i0forward_frame_1 - 0.098 12.6 1.0 0.098 12.6 1.0 1.9 2 0 0 2 2 2 0 Heat stable E.coli enterotoxin 1 WAK_assoc PF14380.6 NODE_88009_length_183_cov_0.810811_g80068_i0forward_frame_1 - 0.0034 18.1 1.7 0.0047 17.6 1.7 1.2 1 0 0 1 1 1 1 Wall-associated receptor kinase C-terminal DUF4236 PF14020.6 NODE_88009_length_183_cov_0.810811_g80068_i0forward_frame_1 - 0.083 13.5 0.0 0.13 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4236) Bac_rhamnosid PF05592.11 NODE_88007_length_183_cov_0.810811_g80066_i0reverse_frame_1 - 0.075 13.0 0.0 0.077 13.0 0.0 1.0 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase concanavalin-like domain Ras PF00071.22 NODE_88000_length_183_cov_0.810811_g80059_i0reverse_frame_1 - 1.5e-14 53.9 0.1 1.5e-14 53.9 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_88000_length_183_cov_0.810811_g80059_i0reverse_frame_1 - 1.4e-10 41.4 0.1 1.5e-10 41.4 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_88000_length_183_cov_0.810811_g80059_i0reverse_frame_1 - 0.0062 16.0 0.1 0.007 15.8 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Pox_T4_N PF04491.12 NODE_87999_length_183_cov_0.844595_g80058_i0reverse_frame_1 - 0.027 14.3 0.5 0.041 13.7 0.5 1.3 1 0 0 1 1 1 0 Poxvirus T4 protein, N terminus TERT_thumb PF17984.1 NODE_87999_length_183_cov_0.844595_g80058_i0forward_frame_1 - 0.094 12.6 0.0 0.098 12.5 0.0 1.0 1 0 0 1 1 1 0 Telomerase reverse transcriptase thumb DNA binding domain DUF5549 PF17703.1 NODE_87992_length_183_cov_0.871622_g80051_i0forward_frame_1 - 0.0097 15.6 0.4 0.011 15.4 0.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5549) PAN_3 PF08277.12 NODE_87989_length_183_cov_0.912162_g80048_i0reverse_frame_1 - 0.084 12.7 2.5 0.091 12.6 2.5 1.1 1 0 0 1 1 1 0 PAN-like domain WSK PF03832.13 NODE_87988_length_183_cov_0.912162_g80047_i0reverse_frame_1 - 6.6 6.5 8.6 12 5.6 8.6 1.5 1 0 0 1 1 1 0 WSK motif LnmK_N_HDF PF18238.1 NODE_87987_length_183_cov_0.918919_g80046_i0reverse_frame_1 - 0.089 12.6 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 LnmK N-terminal Hot Dog Fold domain DUF3565 PF12088.8 NODE_87981_length_183_cov_0.966216_g80040_i0forward_frame_1 - 0.1 12.6 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3565) DDE_Tnp_Tn3 PF01526.17 NODE_87973_length_183_cov_1.006757_g80032_i0reverse_frame_1 - 4.4e-14 52.1 0.0 4.5e-14 52.0 0.0 1.0 1 0 0 1 1 1 1 Tn3 transposase DDE domain RE_NgoBV PF09564.10 NODE_87970_length_183_cov_1.033784_g80029_i0forward_frame_1 - 0.11 11.9 0.1 0.11 11.9 0.1 1.1 1 0 0 1 1 1 0 NgoBV restriction endonuclease OapA_N PF08525.11 NODE_87968_length_183_cov_1.040541_g80027_i0reverse_frame_1 - 0.098 12.6 0.3 0.14 12.1 0.3 1.2 1 0 0 1 1 1 0 Opacity-associated protein A N-terminal motif AMNp_N PF10423.9 NODE_87968_length_183_cov_1.040541_g80027_i0reverse_frame_1 - 0.14 11.8 0.1 0.15 11.6 0.1 1.1 1 0 0 1 1 1 0 Bacterial AMP nucleoside phosphorylase N-terminus Cu-oxidase PF00394.22 NODE_87967_length_183_cov_1.047297_g80026_i0reverse_frame_1 - 0.22 11.6 0.0 0.23 11.6 0.0 1.0 1 0 0 1 1 1 0 Multicopper oxidase Glyco_hydro_36N PF16875.5 NODE_87964_length_183_cov_1.047297_g80023_i0forward_frame_1 - 0.1 12.1 0.4 0.12 11.9 0.4 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 36 N-terminal domain Lamprin PF06403.11 NODE_87954_length_183_cov_1.067568_g80013_i0reverse_frame_1 - 0.031 14.2 1.0 0.033 14.2 1.0 1.0 1 0 0 1 1 1 0 Lamprin SHIRT PF18655.1 NODE_87936_length_183_cov_1.074324_g79995_i0reverse_frame_1 - 0.17 12.5 0.0 0.21 12.2 0.0 1.1 1 0 0 1 1 1 0 SHIRT domain CBM_19 PF03427.13 NODE_87927_length_183_cov_1.074324_g79986_i0reverse_frame_1 - 0.03 14.3 1.6 0.039 14.0 1.6 1.2 1 0 0 1 1 1 0 Carbohydrate binding domain (family 19) Lamprin PF06403.11 NODE_87923_length_183_cov_1.074324_g79982_i0forward_frame_1 - 1.2 9.1 17.4 5.8 6.9 17.4 2.0 1 1 0 1 1 1 0 Lamprin Phage_C PF12025.8 NODE_87916_length_183_cov_1.081081_g79975_i0reverse_frame_1 - 0.24 11.3 1.2 0.49 10.3 0.2 1.8 2 0 0 2 2 2 0 Phage protein C DUF2169 PF09937.9 NODE_87911_length_183_cov_1.081081_g79970_i0forward_frame_1 - 0.085 12.3 0.0 0.085 12.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2169) Phage_fiber PF03335.13 NODE_87908_length_183_cov_1.081081_g79967_i0forward_frame_1 - 0.11 12.7 0.7 0.22 11.8 0.7 1.5 1 0 0 1 1 1 0 Phage tail fibre repeat Vpu PF00558.19 NODE_87903_length_183_cov_1.081081_g79962_i0forward_frame_1 - 0.076 12.8 1.0 0.089 12.6 1.0 1.3 1 0 0 1 1 1 0 Vpu protein Lar_N PF09861.9 NODE_87895_length_183_cov_1.081081_g79954_i0reverse_frame_1 - 0.11 11.7 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Lactate racemase N-terminal domain COPIIcoated_ERV PF07970.12 NODE_87889_length_183_cov_1.081081_g79948_i0forward_frame_1 - 0.084 12.7 0.0 0.084 12.7 0.0 1.0 1 0 0 1 1 1 0 Endoplasmic reticulum vesicle transporter HTH_20 PF12840.7 NODE_87885_length_183_cov_1.081081_g79944_i0forward_frame_1 - 0.075 13.1 0.1 0.091 12.8 0.1 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain Baculo_LEF5_C PF11792.8 NODE_87871_length_183_cov_1.081081_g79930_i0reverse_frame_1 - 0.052 13.2 0.1 0.063 13.0 0.1 1.1 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 C-terminal domain Transgly_assoc PF04226.13 NODE_87862_length_183_cov_1.081081_g79921_i0forward_frame_1 - 0.082 13.2 0.2 0.12 12.6 0.2 1.3 1 0 0 1 1 1 0 Transglycosylase associated protein YjbR PF04237.13 NODE_87859_length_183_cov_1.081081_g79918_i0reverse_frame_1 - 0.11 13.1 0.0 0.13 12.8 0.0 1.2 1 1 0 1 1 1 0 YjbR PocR PF10114.9 NODE_87853_length_183_cov_1.081081_g79912_i0reverse_frame_1 - 0.45 10.3 7.4 0.49 10.1 7.4 1.0 1 0 0 1 1 1 0 Sensory domain found in PocR Pneumo_phosprot PF02478.16 NODE_87853_length_183_cov_1.081081_g79912_i0forward_frame_1 - 0.1 12.1 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 Pneumovirus phosphoprotein Cadherin_C_2 PF16492.5 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.003 18.2 0.2 0.0036 18.0 0.2 1.1 1 0 0 1 1 1 1 Cadherin cytoplasmic C-terminal Metal_resist PF13801.6 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.0065 16.7 1.8 0.0075 16.5 1.8 1.2 1 0 0 1 1 1 1 Heavy-metal resistance EphA2_TM PF14575.6 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.042 14.7 0.1 0.049 14.5 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Fungus-induced PF10917.8 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.33 11.3 4.0 0.23 11.8 2.7 1.5 1 1 0 1 1 1 0 Fungus-induced protein Neur_chan_memb PF02932.16 NODE_87850_length_183_cov_1.081081_g79909_i0reverse_frame_1 - 0.41 10.6 2.2 0.39 10.7 2.2 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region ECSCR PF15820.5 NODE_87850_length_183_cov_1.081081_g79909_i0forward_frame_1 - 0.038 13.8 0.5 0.048 13.5 0.5 1.1 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Cytomega_TRL10 PF06084.11 NODE_87850_length_183_cov_1.081081_g79909_i0forward_frame_1 - 0.11 12.5 0.3 0.12 12.4 0.3 1.1 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein EphA2_TM PF14575.6 NODE_87850_length_183_cov_1.081081_g79909_i0forward_frame_1 - 0.14 13.0 0.6 0.14 13.0 0.6 1.7 1 1 1 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Cyd_oper_YbgE PF09600.10 NODE_87848_length_183_cov_1.081081_g79907_i0forward_frame_1 - 0.028 14.8 0.1 0.041 14.3 0.1 1.3 1 0 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) Sulfate_transp PF00916.20 NODE_87839_length_183_cov_1.081081_g79898_i0forward_frame_1 - 2.7e-15 56.0 2.9 2.9e-15 55.9 2.9 1.0 1 0 0 1 1 1 1 Sulfate permease family RVT_1 PF00078.27 NODE_87837_length_183_cov_1.087838_g79896_i0reverse_frame_1 - 0.023 14.2 0.0 0.037 13.5 0.0 1.4 1 1 1 2 2 2 0 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4227 PF14004.6 NODE_87821_length_183_cov_1.148649_g79880_i0reverse_frame_1 - 0.0074 16.2 0.0 0.0081 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4227) YliH PF10799.8 NODE_87821_length_183_cov_1.148649_g79880_i0forward_frame_1 - 0.021 14.7 0.0 0.024 14.6 0.0 1.1 1 0 0 1 1 1 0 Biofilm formation protein (YliH/bssR) DUF3297 PF11730.8 NODE_87817_length_183_cov_1.155405_g79876_i0forward_frame_1 - 0.16 11.9 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3297) Fzo_mitofusin PF04799.13 NODE_87813_length_183_cov_1.162162_g79872_i0forward_frame_1 - 0.25 10.9 0.0 0.26 10.8 0.0 1.1 1 0 0 1 1 1 0 fzo-like conserved region TNT PF14021.6 NODE_87802_length_183_cov_1.195946_g79861_i0reverse_frame_1 - 0.026 15.1 0.0 0.032 14.8 0.0 1.1 1 0 0 1 1 1 0 Tuberculosis necrotizing toxin DUF4500 PF14937.6 NODE_87801_length_183_cov_1.195946_g79860_i0forward_frame_1 - 0.098 12.7 0.0 0.11 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4500) SulA PF03846.14 NODE_87800_length_183_cov_1.209459_g79859_i0reverse_frame_1 - 0.021 14.7 2.8 0.024 14.6 2.8 1.1 1 0 0 1 1 1 0 Cell division inhibitor SulA DUF2526 PF10735.9 NODE_87800_length_183_cov_1.209459_g79859_i0reverse_frame_1 - 0.12 12.6 0.7 0.14 12.3 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2526) TMEM154 PF15102.6 NODE_87795_length_183_cov_1.222973_g79854_i0reverse_frame_1 - 0.046 13.6 0.1 0.05 13.5 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family SCIMP PF15050.6 NODE_87795_length_183_cov_1.222973_g79854_i0reverse_frame_1 - 0.11 13.0 0.1 0.11 12.9 0.1 1.1 1 0 0 1 1 1 0 SCIMP protein UPF0542 PF15086.6 NODE_87795_length_183_cov_1.222973_g79854_i0reverse_frame_1 - 0.11 12.5 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 FSAP_sig_propep PF03032.15 NODE_87795_length_183_cov_1.222973_g79854_i0reverse_frame_1 - 0.16 12.0 2.8 0.18 11.9 2.0 1.6 1 1 0 1 1 1 0 Frog skin active peptide family signal and propeptide Csm1_N PF18504.1 NODE_87780_length_183_cov_1.270270_g79839_i0reverse_frame_1 - 0.1 12.9 8.2 0.9 9.9 1.7 2.1 1 1 1 2 2 2 0 Csm1 N-terminal domain DUF3450 PF11932.8 NODE_87780_length_183_cov_1.270270_g79839_i0reverse_frame_1 - 2.4 7.4 10.5 2.6 7.3 10.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) eIF-4B PF06273.11 NODE_87780_length_183_cov_1.270270_g79839_i0reverse_frame_1 - 7.8 5.4 7.4 7.9 5.4 7.4 1.0 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Cdh1_DBD_1 PF18196.1 NODE_87774_length_183_cov_1.290541_g79833_i0reverse_frame_1 - 0.064 13.6 0.0 0.072 13.4 0.0 1.1 1 0 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 Mtc PF03820.17 NODE_87770_length_183_cov_1.297297_g79829_i0forward_frame_1 - 4.1e-18 65.5 0.0 4.3e-18 65.4 0.0 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier MPS-4 PF17523.2 NODE_87767_length_183_cov_1.304054_g79826_i0forward_frame_1 - 0.036 14.2 0.7 0.041 14.0 0.7 1.2 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 Lamprin PF06403.11 NODE_87766_length_183_cov_1.304054_g79825_i0forward_frame_1 - 0.028 14.4 1.4 0.032 14.2 1.4 1.1 1 0 0 1 1 1 0 Lamprin Transket_pyr PF02779.24 NODE_87765_length_183_cov_1.310811_g79824_i0forward_frame_1 - 1.6e-05 24.7 0.1 1.8e-05 24.5 0.1 1.1 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Gemini_mov PF01708.16 NODE_87764_length_183_cov_1.310811_g79823_i0reverse_frame_1 - 0.078 12.8 0.3 0.11 12.3 0.3 1.2 1 0 0 1 1 1 0 Geminivirus putative movement protein PH_TFIIH PF08567.11 NODE_87759_length_183_cov_1.331081_g79818_i0reverse_frame_1 - 0.028 14.8 0.4 0.031 14.6 0.4 1.1 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain DUF5132 PF17195.4 NODE_87754_length_183_cov_1.344595_g79813_i0reverse_frame_1 - 0.028 14.5 0.0 0.043 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF5132) Androgen_recep PF02166.16 NODE_87752_length_183_cov_1.344595_g79811_i0reverse_frame_1 - 1.7 7.4 11.2 1.6 7.5 11.2 1.0 1 0 0 1 1 1 0 Androgen receptor Choline_transpo PF04515.12 NODE_87752_length_183_cov_1.344595_g79811_i0forward_frame_1 - 2.1 7.4 10.2 2.3 7.4 10.2 1.1 1 0 0 1 1 1 0 Plasma-membrane choline transporter HCMV_UL139 PF12507.8 NODE_87752_length_183_cov_1.344595_g79811_i0forward_frame_1 - 8.6 6.8 7.7 12 6.3 7.7 1.3 1 1 0 1 1 1 0 Human Cytomegalovirus UL139 protein DUF1231 PF06802.11 NODE_87748_length_183_cov_1.351351_g79807_i0forward_frame_1 - 0.023 13.8 0.7 0.023 13.8 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1231) G_glu_transpept PF01019.21 NODE_87747_length_183_cov_1.351351_g79806_i0forward_frame_1 - 0.055 12.2 0.0 0.057 12.2 0.0 1.0 1 0 0 1 1 1 0 Gamma-glutamyltranspeptidase Toxin_6 PF05453.12 NODE_87742_length_183_cov_1.351351_g79801_i0forward_frame_1 - 0.18 12.3 1.0 0.28 11.7 1.0 1.2 1 0 0 1 1 1 0 BmTXKS1/BmP02 toxin family Multi_Drug_Res PF00893.19 NODE_87739_length_183_cov_1.351351_g79798_i0forward_frame_1 - 1.5e-11 44.8 1.1 1.7e-11 44.6 0.9 1.3 1 1 0 1 1 1 1 Small Multidrug Resistance protein EamA PF00892.20 NODE_87739_length_183_cov_1.351351_g79798_i0forward_frame_1 - 0.0015 18.7 3.5 0.0016 18.6 3.5 1.1 1 0 0 1 1 1 1 EamA-like transporter family Nuc_sug_transp PF04142.15 NODE_87739_length_183_cov_1.351351_g79798_i0forward_frame_1 - 0.0055 15.9 0.0 0.0058 15.8 0.0 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter DMT_6 PF04342.12 NODE_87739_length_183_cov_1.351351_g79798_i0forward_frame_1 - 0.078 13.2 0.5 0.09 13.0 0.5 1.1 1 0 0 1 1 1 0 Putative member of DMT superfamily (DUF486) Motile_Sperm PF00635.26 NODE_87737_length_183_cov_1.364865_g79796_i0forward_frame_1 - 0.054 13.4 0.2 0.061 13.2 0.2 1.2 1 0 0 1 1 1 0 MSP (Major sperm protein) domain SNF2_N PF00176.23 NODE_87736_length_183_cov_1.385135_g79795_i0reverse_frame_1 - 0.031 13.0 0.0 0.031 13.0 0.0 1.0 1 0 0 1 1 1 0 SNF2 family N-terminal domain DUF2976 PF11190.8 NODE_87735_length_183_cov_1.398649_g79794_i0reverse_frame_1 - 0.044 13.6 0.1 0.052 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) NHL PF01436.21 NODE_87734_length_183_cov_1.412162_g79793_i0forward_frame_1 - 0.59 10.3 0.1 0.59 10.3 0.1 2.9 3 1 1 4 4 4 0 NHL repeat DUF1236 PF06823.12 NODE_87729_length_183_cov_1.425676_g79788_i0forward_frame_1 - 0.071 13.0 0.1 0.11 12.4 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1236) Coatomer_WDAD PF04053.14 NODE_87726_length_183_cov_1.445946_g79785_i0reverse_frame_1 - 0.028 13.5 0.0 0.028 13.5 0.0 1.0 1 0 0 1 1 1 0 Coatomer WD associated region AbiEi_4 PF13338.6 NODE_87693_length_183_cov_1.594595_g79752_i0reverse_frame_1 - 0.091 12.9 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin CN_hydrolase PF00795.22 NODE_87688_length_183_cov_1.601351_g79747_i0forward_frame_1 - 0.08 12.3 0.3 0.081 12.2 0.3 1.0 1 0 0 1 1 1 0 Carbon-nitrogen hydrolase DUF393 PF04134.12 NODE_87687_length_183_cov_1.608108_g79746_i0forward_frame_1 - 0.07 14.5 0.0 0.076 14.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF393 UPF0552 PF10574.9 NODE_87684_length_183_cov_1.608108_g79743_i0reverse_frame_1 - 0.022 14.1 0.1 0.025 13.9 0.1 1.0 1 0 0 1 1 1 0 Arp2/3-interacting proteins Arpin DUF1011 PF06237.12 NODE_87682_length_183_cov_1.614865_g79741_i0forward_frame_1 - 0.086 13.2 0.2 0.091 13.1 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1011) DUF2754 PF10953.8 NODE_87676_length_183_cov_1.614865_g79735_i0forward_frame_1 - 0.18 12.0 0.0 0.25 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2754) DUF5633 PF18656.1 NODE_87673_length_183_cov_1.614865_g79732_i0forward_frame_1 - 0.22 11.4 0.1 0.32 10.9 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5633) SCAN PF02023.17 NODE_87665_length_183_cov_1.621622_g79724_i0reverse_frame_1 - 0.059 13.2 0.2 0.071 12.9 0.2 1.1 1 0 0 1 1 1 0 SCAN domain SoxD PF04267.12 NODE_87665_length_183_cov_1.621622_g79724_i0reverse_frame_1 - 0.08 13.1 0.2 0.089 12.9 0.2 1.1 1 0 0 1 1 1 0 Sarcosine oxidase, delta subunit family DUF5623 PF18536.1 NODE_87665_length_183_cov_1.621622_g79724_i0reverse_frame_1 - 0.13 12.6 0.0 0.13 12.5 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5623) GvpK PF05121.12 NODE_87662_length_183_cov_1.621622_g79721_i0reverse_frame_1 - 0.18 11.9 0.0 0.21 11.6 0.0 1.1 1 0 0 1 1 1 0 Gas vesicle protein K SAWADEE PF16719.5 NODE_87655_length_183_cov_1.621622_g79714_i0forward_frame_1 - 0.07 13.1 0.0 0.076 13.0 0.0 1.1 1 0 0 1 1 1 0 SAWADEE domain Kelch_6 PF13964.6 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 5.9e-11 42.2 0.4 2.3e-06 27.7 0.1 2.0 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 1e-08 34.6 0.1 2.2e-07 30.3 0.0 2.1 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 6.8e-05 22.8 0.7 0.0072 16.3 0.2 2.1 1 1 1 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 0.00088 19.5 0.2 1.3 9.4 0.0 2.1 2 0 0 2 2 2 2 Galactose oxidase, central domain aGPT-Pplase3 PF18746.1 NODE_87653_length_183_cov_1.628378_g79712_i0forward_frame_1 - 0.025 13.9 0.0 0.025 13.9 0.0 1.1 1 0 0 1 1 1 0 Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3 DUF1796 PF08795.10 NODE_87645_length_183_cov_1.668919_g79704_i0reverse_frame_1 - 0.067 13.1 0.3 0.073 13.0 0.3 1.1 1 0 0 1 1 1 0 Putative papain-like cysteine peptidase (DUF1796) CxxCxxCC PF03692.15 NODE_87643_length_183_cov_1.668919_g79702_i0reverse_frame_1 - 0.049 14.3 7.4 0.059 14.1 7.4 1.1 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain AAA_7 PF12775.7 NODE_87616_length_183_cov_1.790541_g79675_i0forward_frame_1 - 1e-25 90.3 0.1 1e-25 90.3 0.1 1.0 1 0 0 1 1 1 1 P-loop containing dynein motor region TAP35_44 PF07265.11 NODE_87613_length_183_cov_1.810811_g79672_i0forward_frame_1 - 0.1 12.6 0.1 0.12 12.4 0.1 1.0 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 SH3_1 PF00018.28 NODE_87602_length_183_cov_1.858108_g79661_i0reverse_frame_1 - 0.062 12.9 0.0 0.095 12.3 0.0 1.4 1 0 0 1 1 1 0 SH3 domain Leader_Erm PF08253.11 NODE_87602_length_183_cov_1.858108_g79661_i0reverse_frame_1 - 0.1 12.9 0.1 0.21 11.9 0.1 1.5 1 0 0 1 1 1 0 Erm Leader peptide RE_SinI PF09570.10 NODE_87599_length_183_cov_1.885135_g79658_i0forward_frame_1 - 0.14 11.3 0.0 0.17 11.1 0.0 1.0 1 0 0 1 1 1 0 SinI restriction endonuclease DUF4731 PF15875.5 NODE_87595_length_183_cov_1.891892_g79654_i0reverse_frame_1 - 0.063 13.5 0.3 0.067 13.4 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) Umbravirus_LDM PF04817.12 NODE_87589_length_183_cov_1.898649_g79648_i0reverse_frame_1 - 0.011 15.1 0.9 0.012 15.0 0.9 1.1 1 0 0 1 1 1 0 Umbravirus long distance movement (LDM) family HCV_NS5a PF01506.19 NODE_87579_length_183_cov_2.013514_g79638_i0forward_frame_1 - 0.041 13.7 0.7 2.4 8.1 0.0 2.3 2 0 0 2 2 2 0 Hepatitis C virus non-structural 5a protein membrane anchor S_tail_recep_bd PF14928.6 NODE_87576_length_183_cov_2.047297_g79635_i0forward_frame_1 - 0.011 16.4 0.2 0.017 15.8 0.2 1.6 1 1 0 1 1 1 0 Short tail fibre protein receptor-binding domain MORN PF02493.20 NODE_87574_length_183_cov_2.067568_g79633_i0forward_frame_1 - 0.12 12.3 1.8 0.76 9.8 0.2 2.9 4 0 0 4 4 4 0 MORN repeat ECM1 PF05782.11 NODE_87567_length_183_cov_2.135135_g79626_i0forward_frame_1 - 0.1 11.5 0.9 0.12 11.3 0.9 1.0 1 0 0 1 1 1 0 Extracellular matrix protein 1 (ECM1) DUF4780 PF16012.5 NODE_87566_length_183_cov_2.135135_g79625_i0forward_frame_1 - 0.012 15.1 0.1 0.014 14.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4780) DUF433 PF04255.14 NODE_87561_length_183_cov_2.155405_g79620_i0forward_frame_1 - 0.015 15.2 0.0 0.024 14.5 0.0 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF433) Pestivirus_E2 PF16329.5 NODE_87555_length_183_cov_2.168919_g79614_i0reverse_frame_1 - 0.019 13.8 0.1 0.021 13.7 0.1 1.0 1 0 0 1 1 1 0 Pestivirus envelope glycoprotein E2 FAM216B PF15107.6 NODE_87554_length_183_cov_2.195946_g79613_i0forward_frame_1 - 0.014 15.2 0.0 0.017 15.0 0.0 1.1 1 0 0 1 1 1 0 FAM216B protein family SieB PF14163.6 NODE_87552_length_183_cov_2.256757_g79611_i0reverse_frame_1 - 0.27 10.7 6.3 0.31 10.5 6.3 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B Polysacc_synt_3 PF13440.6 NODE_87542_length_183_cov_2.391892_g79601_i0forward_frame_1 - 3.4e-10 39.6 0.1 3.5e-10 39.6 0.1 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein ZYG-11_interact PF05884.12 NODE_87542_length_183_cov_2.391892_g79601_i0forward_frame_1 - 0.0044 16.5 0.2 0.0048 16.4 0.2 1.0 1 0 0 1 1 1 1 Interactor of ZYG-11 Polysacc_synt PF01943.17 NODE_87542_length_183_cov_2.391892_g79601_i0forward_frame_1 - 0.0048 16.3 0.5 0.0049 16.3 0.5 1.0 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein TilS_C PF11734.8 NODE_87538_length_183_cov_2.439189_g79597_i0reverse_frame_1 - 0.13 11.8 0.1 0.18 11.2 0.1 1.3 1 1 0 1 1 1 0 TilS substrate C-terminal domain CM2 PF03021.14 NODE_87538_length_183_cov_2.439189_g79597_i0forward_frame_1 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Influenza C virus M2 protein IATP PF04568.12 NODE_87535_length_183_cov_2.459459_g79594_i0forward_frame_1 - 0.11 12.9 1.3 0.13 12.7 1.3 1.2 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP Myotub-related PF06602.14 NODE_87534_length_183_cov_2.466216_g79593_i0reverse_frame_1 - 1.1e-12 47.6 0.0 1.2e-12 47.5 0.0 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain HrcA_DNA-bdg PF03444.15 NODE_87533_length_183_cov_2.486486_g79592_i0forward_frame_1 - 0.079 12.6 0.1 0.096 12.4 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Mut7-C PF01927.16 NODE_87532_length_183_cov_2.500000_g79591_i0forward_frame_1 - 0.016 15.3 1.7 0.018 15.1 1.7 1.0 1 0 0 1 1 1 0 Mut7-C RNAse domain DUF5452 PF17533.2 NODE_87532_length_183_cov_2.500000_g79591_i0forward_frame_1 - 0.042 13.9 0.2 0.048 13.7 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5452) Churchill PF06573.11 NODE_87532_length_183_cov_2.500000_g79591_i0forward_frame_1 - 0.071 13.4 4.6 0.098 13.0 4.6 1.2 1 0 0 1 1 1 0 Churchill protein GCS PF03074.16 NODE_87522_length_183_cov_2.695946_g79581_i0reverse_frame_1 - 9.9e-22 77.8 0.1 1.1e-21 77.7 0.1 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase DUF3709 PF12493.8 NODE_87518_length_183_cov_2.783784_g79577_i0reverse_frame_1 - 0.098 12.7 3.7 0.12 12.5 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3709) Tmemb_161AB PF10268.9 NODE_87512_length_183_cov_3.094595_g79571_i0reverse_frame_1 - 0.17 10.5 0.8 0.16 10.6 0.8 1.0 1 0 0 1 1 1 0 Predicted transmembrane protein 161AB Marek_A PF02124.15 NODE_87512_length_183_cov_3.094595_g79571_i0forward_frame_1 - 0.053 13.3 0.1 0.058 13.2 0.1 1.0 1 0 0 1 1 1 0 Marek's disease glycoprotein A DUF3099 PF11298.8 NODE_87505_length_183_cov_3.304054_g79564_i0forward_frame_1 - 0.21 11.8 0.9 0.3 11.3 0.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3099) Gin PF10764.9 NODE_87497_length_183_cov_4.317568_g79556_i0forward_frame_1 - 0.13 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Inhibitor of sigma-G Gin Usher PF00577.20 NODE_87496_length_183_cov_4.614865_g79555_i0reverse_frame_1 - 1.2e-27 97.0 0.2 1.3e-27 96.9 0.2 1.0 1 0 0 1 1 1 1 Outer membrane usher protein DUF3553 PF12073.8 NODE_87490_length_183_cov_10.378378_g79549_i0reverse_frame_1 - 0.058 13.1 0.0 0.073 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3553) TSP_C PF05735.12 NODE_87486_length_183_cov_12.513514_g79545_i0reverse_frame_1 - 0.0018 18.2 0.0 0.002 18.1 0.0 1.0 1 0 0 1 1 1 1 Thrombospondin C-terminal region DUF3760 PF12586.8 NODE_87486_length_183_cov_12.513514_g79545_i0forward_frame_1 - 0.14 12.3 0.9 0.32 11.2 0.9 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3760) Endonuc-BsobI PF09194.10 NODE_87485_length_183_cov_17.148649_g79544_i0forward_frame_1 - 0.22 10.7 0.0 0.24 10.6 0.0 1.0 1 0 0 1 1 1 0 Restriction endonuclease BsobI PLA2_B PF01735.18 NODE_87483_length_183_cov_18.750000_g79542_i0reverse_frame_1 - 0.28 9.5 0.9 0.28 9.5 0.9 1.0 1 0 0 1 1 1 0 Lysophospholipase catalytic domain DUF620 PF04788.12 NODE_87483_length_183_cov_18.750000_g79542_i0forward_frame_1 - 0.071 12.5 0.1 0.079 12.4 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF620) TcpS PF17456.2 NODE_87481_length_183_cov_20.547297_g79540_i0forward_frame_1 - 0.062 13.4 0.3 0.066 13.3 0.3 1.0 1 0 0 1 1 1 0 Toxin-coregulated pilus protein S Orthopox_F7 PF05813.12 NODE_87479_length_183_cov_21.222973_g79538_i0reverse_frame_1 - 0.042 14.0 0.8 0.06 13.5 0.8 1.3 1 0 0 1 1 1 0 Orthopoxvirus F7 protein vMSA PF00695.19 NODE_87474_length_183_cov_24.337838_g79533_i0forward_frame_1 - 0.063 12.4 0.9 0.069 12.2 0.9 1.0 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus Myb_DNA-bind_2 PF08914.11 NODE_87470_length_183_cov_27.013514_g79529_i0forward_frame_1 - 0.0081 16.3 0.3 0.012 15.8 0.1 1.4 1 1 0 1 1 1 1 Rap1 Myb domain zf-LITAF-like PF10601.9 NODE_87465_length_183_cov_30.831081_g79524_i0reverse_frame_1 - 0.0039 17.4 0.9 0.0039 17.4 0.9 1.9 1 1 1 2 2 2 1 LITAF-like zinc ribbon domain LapA_dom PF06305.11 NODE_87465_length_183_cov_30.831081_g79524_i0reverse_frame_1 - 0.061 13.1 1.0 0.076 12.8 1.0 1.3 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Mem_trans PF03547.18 NODE_87463_length_183_cov_32.790541_g79522_i0reverse_frame_1 - 0.13 10.6 2.2 0.14 10.5 2.2 1.0 1 0 0 1 1 1 0 Membrane transport protein DUF5480 PF17576.2 NODE_87460_length_183_cov_33.047297_g79519_i0reverse_frame_1 - 0.026 14.5 0.0 0.028 14.4 0.0 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF5480) Clathrin_bdg PF15045.6 NODE_87449_length_183_cov_37.621622_g79508_i0forward_frame_1 - 0.18 11.8 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Clathrin-binding box of Aftiphilin, vesicle trafficking Vps36-NZF-N PF16988.5 NODE_87436_length_183_cov_48.641892_g79495_i0forward_frame_1 - 0.047 13.1 0.2 0.057 12.8 0.2 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Nup160 PF11715.8 NODE_87427_length_183_cov_55.317568_g79486_i0reverse_frame_1 - 0.1 11.2 0.1 0.11 11.1 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin Nup120/160 Herpes_U34 PF04541.13 NODE_87427_length_183_cov_55.317568_g79486_i0forward_frame_1 - 0.061 12.6 0.0 0.063 12.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus virion protein U34 Trefoil PF00088.18 NODE_87425_length_183_cov_60.020270_g79484_i0reverse_frame_1 - 0.057 13.3 3.9 0.098 12.6 3.9 1.7 1 1 0 1 1 1 0 Trefoil (P-type) domain PhoLip_ATPase_N PF16209.5 NODE_87423_length_183_cov_63.256757_g79482_i0reverse_frame_1 - 0.0097 15.6 1.8 0.014 15.1 1.8 1.3 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal RPS31 PF17067.5 NODE_87420_length_183_cov_70.033784_g79479_i0forward_frame_1 - 0.1 12.8 1.0 0.12 12.6 1.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e CP12 PF02672.15 NODE_87419_length_183_cov_75.689189_g79478_i0reverse_frame_1 - 0.034 14.9 0.1 0.043 14.6 0.1 1.2 1 0 0 1 1 1 0 CP12 domain MAM33 PF02330.16 NODE_87410_length_183_cov_105.500000_g79469_i0reverse_frame_1 - 1.2e-10 41.7 0.1 1.4e-10 41.5 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial glycoprotein zf-B_box PF00643.24 NODE_87402_length_183_cov_166.864865_g79461_i0reverse_frame_1 - 0.00024 21.2 6.4 0.00031 20.9 6.4 1.2 1 0 0 1 1 1 1 B-box zinc finger DUF2318 PF10080.9 NODE_87402_length_183_cov_166.864865_g79461_i0reverse_frame_1 - 0.011 15.8 1.8 0.011 15.8 1.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) Zfx_Zfy_act PF04704.13 NODE_87397_length_183_cov_224.574324_g79456_i0forward_frame_1 - 0.017 14.2 0.0 0.019 14.1 0.0 1.0 1 0 0 1 1 1 0 Zfx / Zfy transcription activation region SCIMP PF15050.6 NODE_87389_length_183_cov_984.297297_g79448_i0forward_frame_1 - 0.53 10.7 2.0 0.59 10.6 2.0 1.1 1 0 0 1 1 1 0 SCIMP protein zf-C2H2_12 PF18658.1 NODE_87388_length_183_cov_1592.716216_g79447_i0forward_frame_1 - 0.92 9.1 6.0 2.3 7.9 1.0 2.1 1 1 1 2 2 2 0 Zinc-finger C2H2-type FANCI_HD1 PF14679.6 NODE_87387_length_183_cov_1794.587838_g79446_i0reverse_frame_1 - 0.01 15.8 0.7 0.012 15.6 0.7 1.1 1 0 0 1 1 1 1 FANCI helical domain 1 Enolase_N PF03952.16 NODE_87383_length_184_cov_0.798658_g79442_i0reverse_frame_3 - 2.6e-11 43.8 0.1 3.2e-11 43.5 0.1 1.1 1 0 0 1 1 1 1 Enolase, N-terminal domain Enolase_C PF00113.22 NODE_87383_length_184_cov_0.798658_g79442_i0reverse_frame_3 - 5.6e-06 25.8 0.6 6.9e-06 25.5 0.6 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain YfhO PF09586.10 NODE_87381_length_184_cov_0.805369_g79440_i0forward_frame_3 - 0.058 11.6 4.8 0.061 11.6 4.8 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO DUF2690 PF10901.8 NODE_87378_length_184_cov_0.805369_g79437_i0forward_frame_3 - 0.048 14.0 0.2 0.054 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2690) Lamprin PF06403.11 NODE_87377_length_184_cov_0.832215_g79436_i0forward_frame_2 - 0.55 10.2 3.7 0.71 9.8 3.7 1.4 1 1 0 1 1 1 0 Lamprin Ac76 PF05814.11 NODE_87375_length_184_cov_0.838926_g79434_i0forward_frame_3 - 0.59 10.2 1.7 0.75 9.8 1.7 1.1 1 0 0 1 1 1 0 Orf76 (Ac76) GerPB PF10803.8 NODE_87373_length_184_cov_0.865772_g79432_i0reverse_frame_2 - 0.095 12.8 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Spore germination GerPB COX7B PF05392.11 NODE_87370_length_184_cov_0.906040_g79429_i0reverse_frame_2 - 0.097 12.4 2.3 0.11 12.2 2.3 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase chain VIIB Cwf_Cwc_15 PF04889.12 NODE_87370_length_184_cov_0.906040_g79429_i0forward_frame_3 - 0.67 9.6 8.3 0.63 9.7 8.3 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Astro_capsid_p PF12226.8 NODE_87370_length_184_cov_0.906040_g79429_i0forward_frame_3 - 2.4 7.2 6.3 2.3 7.3 6.3 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DNA_pol_phi PF04931.13 NODE_87370_length_184_cov_0.906040_g79429_i0forward_frame_3 - 4.9 5.1 8.5 5.8 4.9 8.5 1.0 1 0 0 1 1 1 0 DNA polymerase phi OTT_1508_deam PF14441.6 NODE_87368_length_184_cov_0.919463_g79427_i0reverse_frame_3 - 0.062 13.3 0.3 0.066 13.2 0.3 1.2 1 0 0 1 1 1 0 OTT_1508-like deaminase Atrophin-1 PF03154.15 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_3 - 0.069 11.4 5.7 0.063 11.6 5.7 1.1 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_3 - 0.15 12.0 8.4 0.17 11.9 8.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Atrophin-1 PF03154.15 NODE_87363_length_184_cov_0.939597_g79422_i0reverse_frame_2 - 0.086 11.1 2.0 0.085 11.1 2.0 1.1 1 0 0 1 1 1 0 Atrophin-1 family PIG-P PF08510.12 NODE_87361_length_184_cov_0.939597_g79420_i0reverse_frame_2 - 1.3 8.9 4.0 1.5 8.8 4.0 1.1 1 0 0 1 1 1 0 PIG-P DUF3043 PF11241.8 NODE_87361_length_184_cov_0.939597_g79420_i0reverse_frame_2 - 2.6 8.1 3.5 2.7 8.0 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) OST3_OST6 PF04756.13 NODE_87361_length_184_cov_0.939597_g79420_i0reverse_frame_2 - 6.9 5.9 6.6 7.6 5.8 6.6 1.0 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Pex24p PF06398.11 NODE_87361_length_184_cov_0.939597_g79420_i0reverse_frame_2 - 8.5 5.2 6.4 9.2 5.1 6.4 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin eIF_4G1 PF12152.8 NODE_87355_length_184_cov_0.993289_g79414_i0reverse_frame_3 - 0.1 12.8 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4G1 DUF3146 PF11344.8 NODE_87348_length_184_cov_1.006711_g79407_i0reverse_frame_2 - 0.11 12.2 0.0 0.14 11.8 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3146) DUF3267 PF11667.8 NODE_87345_length_184_cov_1.040268_g79404_i0reverse_frame_2 - 0.023 15.0 0.9 0.024 14.9 0.9 1.0 1 0 0 1 1 1 0 Putative zincin peptidase Toxin_29 PF08116.11 NODE_87345_length_184_cov_1.040268_g79404_i0reverse_frame_2 - 0.053 13.5 4.1 0.11 12.5 4.1 1.6 1 0 0 1 1 1 0 PhTx neurotoxin family Gly-zipper_Omp PF13488.6 NODE_87343_length_184_cov_1.046980_g79402_i0forward_frame_3 - 0.11 12.6 10.0 0.67 10.0 4.4 2.1 2 0 0 2 2 2 0 Glycine zipper DUF1269 PF06897.12 NODE_87343_length_184_cov_1.046980_g79402_i0forward_frame_3 - 4.8 7.5 7.7 4.3 7.7 7.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1269) DUF2722 PF10846.8 NODE_87342_length_184_cov_1.046980_g79401_i0reverse_frame_2 - 0.59 9.0 6.1 0.58 9.0 6.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) Metal_resist PF13801.6 NODE_87340_length_184_cov_1.053691_g79399_i0reverse_frame_3 - 7.5 6.8 6.3 10 6.4 6.3 1.2 1 0 0 1 1 1 0 Heavy-metal resistance NOA36 PF06524.12 NODE_87340_length_184_cov_1.053691_g79399_i0forward_frame_2 - 0.8 9.0 10.0 0.75 9.1 10.0 1.0 1 0 0 1 1 1 0 NOA36 protein CDC45 PF02724.14 NODE_87340_length_184_cov_1.053691_g79399_i0forward_frame_2 - 2.5 6.3 4.1 2.2 6.5 4.1 1.0 1 0 0 1 1 1 0 CDC45-like protein Transpos_assoc PF13963.6 NODE_87337_length_184_cov_1.053691_g79396_i0forward_frame_3 - 0.024 15.0 0.2 0.024 15.0 0.2 1.1 1 0 0 1 1 1 0 Transposase-associated domain DUF3290 PF11694.8 NODE_87336_length_184_cov_1.060403_g79395_i0forward_frame_3 - 0.068 13.1 0.5 0.075 13.0 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DUF3592 PF12158.8 NODE_87336_length_184_cov_1.060403_g79395_i0forward_frame_3 - 0.087 12.9 0.0 0.094 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) DUF5432 PF17497.2 NODE_87333_length_184_cov_1.060403_g79392_i0reverse_frame_2 - 0.09 12.9 4.3 0.075 13.1 3.3 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5432) Mononeg_mRNAcap PF14318.6 NODE_87332_length_184_cov_1.060403_g79391_i0reverse_frame_3 - 0.024 13.9 0.2 0.026 13.8 0.2 1.0 1 0 0 1 1 1 0 Mononegavirales mRNA-capping region V Mlo PF03094.15 NODE_87330_length_184_cov_1.060403_g79389_i0forward_frame_3 - 0.12 10.7 5.0 0.13 10.7 5.0 1.0 1 0 0 1 1 1 0 Mlo family Aldo_ket_red PF00248.21 NODE_87325_length_184_cov_1.067114_g79384_i0forward_frame_2 - 0.0063 15.7 0.0 0.0063 15.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks448.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks448.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks448.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks448.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:53 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Arm-DNA-bind_3 PF13356.6 NODE_87315_length_184_cov_1.067114_g79374_i0forward_frame_2 - 0.13 12.6 0.9 0.14 12.5 0.9 1.1 1 0 0 1 1 1 0 Arm DNA-binding domain GlgX_C PF18390.1 NODE_87309_length_184_cov_1.067114_g79368_i0forward_frame_3 - 0.095 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Glycogen debranching enzyme C-terminal domain ER-remodelling PF14755.6 NODE_87308_length_184_cov_1.067114_g79367_i0reverse_frame_3 - 0.0037 17.6 5.0 0.0039 17.5 5.0 1.0 1 0 0 1 1 1 1 Intracellular membrane remodeller EF-hand_9 PF14658.6 NODE_87307_length_184_cov_1.067114_g79366_i0reverse_frame_3 - 0.12 12.7 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain PPV_E2_C PF00511.17 NODE_87302_length_184_cov_1.067114_g79361_i0forward_frame_2 - 0.0093 16.1 0.8 0.013 15.6 0.8 1.2 1 0 0 1 1 1 1 E2 (early) protein, C terminal Rpr2 PF04032.16 NODE_87300_length_184_cov_1.067114_g79359_i0forward_frame_3 - 0.048 13.9 0.4 0.056 13.7 0.4 1.1 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Peptidase_C2 PF00648.21 NODE_87297_length_184_cov_1.067114_g79356_i0forward_frame_2 - 0.007 15.4 0.1 0.0082 15.2 0.1 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Inhibitor_I78 PF11720.8 NODE_87296_length_184_cov_1.067114_g79355_i0reverse_frame_2 - 0.04 14.0 0.0 0.045 13.8 0.0 1.1 1 0 0 1 1 1 0 Peptidase inhibitor I78 family LZ_Tnp_IS481 PF13011.6 NODE_87296_length_184_cov_1.067114_g79355_i0forward_frame_2 - 0.1 13.1 0.0 0.12 12.9 0.0 1.1 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 GlpM PF06942.12 NODE_87293_length_184_cov_1.067114_g79352_i0forward_frame_3 - 0.041 14.3 1.8 0.043 14.2 1.8 1.0 1 0 0 1 1 1 0 GlpM protein Defensin_5 PF18251.1 NODE_87290_length_184_cov_1.073826_g79349_i0forward_frame_2 - 0.073 13.2 0.8 0.13 12.4 0.8 1.4 1 0 0 1 1 1 0 Fungal defensin Copsin DAD PF02109.16 NODE_87289_length_184_cov_1.073826_g79348_i0forward_frame_3 - 0.024 14.9 0.3 0.026 14.8 0.3 1.0 1 0 0 1 1 1 0 DAD family Peptidase_S28 PF05577.12 NODE_87287_length_184_cov_1.073826_g79346_i0reverse_frame_2 - 0.35 9.6 2.3 0.34 9.6 2.3 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 DctM PF06808.12 NODE_87287_length_184_cov_1.073826_g79346_i0forward_frame_3 - 3.9e-12 45.7 1.5 4.1e-12 45.6 1.5 1.0 1 0 0 1 1 1 1 Tripartite ATP-independent periplasmic transporter, DctM component F-box PF00646.33 NODE_87286_length_184_cov_1.073826_g79345_i0forward_frame_2 - 0.016 15.0 0.6 0.024 14.5 0.6 1.3 1 0 0 1 1 1 0 F-box domain DUF4658 PF15555.6 NODE_87285_length_184_cov_1.073826_g79344_i0forward_frame_3 - 0.059 13.5 0.0 0.092 12.9 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4658) OAF PF14941.6 NODE_87278_length_184_cov_1.073826_g79337_i0forward_frame_2 - 0.17 11.3 0.6 0.19 11.1 0.6 1.0 1 0 0 1 1 1 0 Transcriptional regulator, Out at first Nore1-SARAH PF16517.5 NODE_87277_length_184_cov_1.073826_g79336_i0forward_frame_2 - 0.031 14.2 0.3 1.4 8.8 0.0 2.5 2 1 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Clathrin-link PF09268.10 NODE_87277_length_184_cov_1.073826_g79336_i0forward_frame_2 - 1.4 8.4 3.9 1.1 8.6 1.0 2.4 2 1 0 2 2 2 0 Clathrin, heavy-chain linker Fer4_18 PF13746.6 NODE_87274_length_184_cov_1.073826_g79333_i0reverse_frame_3 - 0.093 12.9 0.3 0.1 12.8 0.3 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF1891 PF09004.10 NODE_87274_length_184_cov_1.073826_g79333_i0forward_frame_2 - 0.01 15.4 0.3 0.015 14.9 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1891) COBRA PF04833.15 NODE_87271_length_184_cov_1.073826_g79330_i0reverse_frame_2 - 0.045 13.7 0.9 0.045 13.6 0.9 1.1 1 0 0 1 1 1 0 COBRA-like protein Metallothio_Cad PF07846.11 NODE_87271_length_184_cov_1.073826_g79330_i0forward_frame_2 - 0.14 12.3 0.1 0.25 11.5 0.1 1.4 1 0 0 1 1 1 0 Metallothionein family DUF2024 PF09630.10 NODE_87270_length_184_cov_1.073826_g79329_i0forward_frame_3 - 0.089 12.7 0.2 0.096 12.6 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) DUF998 PF06197.13 NODE_87269_length_184_cov_1.073826_g79328_i0forward_frame_3 - 0.077 12.6 0.7 0.086 12.4 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF998) Eclosion PF04736.12 NODE_87262_length_184_cov_1.073826_g79321_i0reverse_frame_3 - 0.077 12.7 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Eclosion hormone Rotavirus_VP1 PF12289.8 NODE_87262_length_184_cov_1.073826_g79321_i0reverse_frame_3 - 0.11 11.5 0.0 0.12 11.3 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP1 C-terminal domain SLC3A2_N PF16028.5 NODE_87262_length_184_cov_1.073826_g79321_i0reverse_frame_3 - 0.11 12.0 2.7 0.5 10.0 0.3 2.0 1 1 1 2 2 2 0 Solute carrier family 3 member 2 N-terminus Pkinase_Tyr PF07714.17 NODE_87259_length_184_cov_1.073826_g79318_i0forward_frame_3 - 0.002 17.5 0.0 0.002 17.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_87259_length_184_cov_1.073826_g79318_i0forward_frame_3 - 0.0083 15.5 0.0 0.0083 15.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain GTP-bdg_N PF13167.6 NODE_87254_length_184_cov_1.073826_g79313_i0forward_frame_3 - 0.1 13.3 0.2 0.13 12.9 0.2 1.1 1 0 0 1 1 1 0 GTP-binding GTPase N-terminal TYA PF01021.19 NODE_87251_length_184_cov_1.073826_g79310_i0reverse_frame_2 - 0.016 15.5 0.2 0.018 15.3 0.2 1.1 1 0 0 1 1 1 0 TYA transposon protein Gryzun-like PF12742.7 NODE_87250_length_184_cov_1.073826_g79309_i0reverse_frame_3 - 0.13 12.3 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Gryzun, putative Golgi trafficking Mito_carr PF00153.27 NODE_87245_length_184_cov_1.073826_g79304_i0reverse_frame_3 - 7.6e-07 29.0 0.1 9.6e-07 28.6 0.1 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein SelP_C PF04593.14 NODE_87241_length_184_cov_1.073826_g79300_i0reverse_frame_2 - 0.012 15.6 1.5 0.014 15.3 1.5 1.2 1 1 0 1 1 1 0 Selenoprotein P, C terminal region GTA_holin_3TM PF11351.8 NODE_87239_length_184_cov_1.073826_g79298_i0forward_frame_2 - 0.097 13.2 0.7 0.097 13.2 0.7 1.1 1 0 0 1 1 1 0 Holin of 3TMs, for gene-transfer release T2SSF PF00482.23 NODE_87238_length_184_cov_1.073826_g79297_i0reverse_frame_3 - 0.082 12.9 8.2 0.11 12.4 8.2 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F SelP_N PF04592.14 NODE_87238_length_184_cov_1.073826_g79297_i0forward_frame_3 - 0.52 9.7 12.3 0.5 9.7 12.3 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region NicO PF03824.16 NODE_87238_length_184_cov_1.073826_g79297_i0forward_frame_3 - 5.4 6.3 6.1 5.2 6.3 6.1 1.0 1 0 0 1 1 1 0 High-affinity nickel-transport protein Dicty_CAR PF05462.11 NODE_87237_length_184_cov_1.073826_g79296_i0forward_frame_3 - 0.016 14.4 0.7 0.016 14.3 0.7 1.0 1 0 0 1 1 1 0 Slime mold cyclic AMP receptor CysA_C_terminal PF17850.1 NODE_87236_length_184_cov_1.073826_g79295_i0reverse_frame_3 - 0.092 13.3 0.0 0.12 13.0 0.0 1.2 1 0 0 1 1 1 0 CysA C-terminal regulatory domain XRN_N PF03159.18 NODE_87234_length_184_cov_1.073826_g79293_i0reverse_frame_3 - 0.02 14.3 0.5 0.021 14.3 0.5 1.1 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus IMUP PF15761.5 NODE_87234_length_184_cov_1.073826_g79293_i0reverse_frame_2 - 0.00079 20.1 7.0 0.00087 20.0 7.0 1.1 1 0 0 1 1 1 1 Immortalisation up-regulated protein Herpes_pp85 PF04637.12 NODE_87234_length_184_cov_1.073826_g79293_i0reverse_frame_2 - 0.33 9.3 1.8 0.36 9.2 1.8 1.0 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) zf-CCHC_3 PF13917.6 NODE_87233_length_184_cov_1.073826_g79292_i0forward_frame_3 - 0.049 13.6 0.0 0.086 12.8 0.0 1.4 1 0 0 1 1 1 0 Zinc knuckle COQ9 PF08511.11 NODE_87231_length_184_cov_1.073826_g79290_i0reverse_frame_2 - 0.066 13.0 0.0 0.066 13.0 0.0 1.2 1 0 0 1 1 1 0 COQ9 Nodulin_late PF07127.11 NODE_87231_length_184_cov_1.073826_g79290_i0reverse_frame_2 - 0.084 13.2 2.4 0.12 12.8 2.4 1.4 1 1 0 1 1 1 0 Late nodulin protein FAM150 PF15129.6 NODE_87231_length_184_cov_1.073826_g79290_i0forward_frame_3 - 0.0037 17.4 2.3 0.0045 17.1 2.3 1.1 1 0 0 1 1 1 1 FAM150 family Furin-like_2 PF15913.5 NODE_87229_length_184_cov_1.073826_g79288_i0forward_frame_3 - 0.0012 19.0 2.1 0.0013 18.9 2.1 1.1 1 0 0 1 1 1 1 Furin-like repeat, cysteine-rich Spheroidin PF05541.12 NODE_87226_length_184_cov_1.073826_g79285_i0forward_frame_3 - 1 7.1 3.1 1.1 7.0 3.1 1.0 1 0 0 1 1 1 0 Entomopoxvirus spheroidin protein Pertussis_S2S3 PF02918.15 NODE_87223_length_184_cov_1.073826_g79282_i0reverse_frame_2 - 0.084 12.8 0.0 0.084 12.8 0.0 1.0 1 0 0 1 1 1 0 Pertussis toxin, subunit 2 and 3, C-terminal domain DUF3515 PF12028.8 NODE_87221_length_184_cov_1.073826_g79280_i0reverse_frame_2 - 0.034 13.9 0.1 0.034 13.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3515) DUF1636 PF07845.11 NODE_87221_length_184_cov_1.073826_g79280_i0forward_frame_2 - 0.046 14.2 1.7 0.048 14.1 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) DUF5527 PF17665.1 NODE_87220_length_184_cov_1.073826_g79279_i0forward_frame_2 - 0.091 12.3 0.1 0.1 12.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5527) NICE-1 PF15845.5 NODE_87219_length_184_cov_1.073826_g79278_i0forward_frame_2 - 0.27 12.0 6.5 0.33 11.8 6.5 1.1 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family MMADHC PF10229.9 NODE_87213_length_184_cov_1.073826_g79272_i0reverse_frame_3 - 0.048 13.4 0.0 0.056 13.2 0.0 1.0 1 0 0 1 1 1 0 Methylmalonic aciduria and homocystinuria type D protein zf-Di19 PF05605.12 NODE_87209_length_184_cov_1.073826_g79268_i0reverse_frame_3 - 0.11 12.8 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Plasmod_dom_1 PF09715.10 NODE_87205_length_184_cov_1.100671_g79264_i0reverse_frame_2 - 0.074 13.1 1.0 0.15 12.1 1.0 1.6 1 1 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) DUF5399 PF17377.2 NODE_87203_length_184_cov_1.107383_g79262_i0forward_frame_3 - 0.021 14.6 0.0 0.023 14.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5399) Nramp PF01566.18 NODE_87194_length_184_cov_1.154362_g79253_i0forward_frame_3 - 0.13 11.2 1.3 0.14 11.1 1.3 1.0 1 0 0 1 1 1 0 Natural resistance-associated macrophage protein Herpes_gE PF02480.16 NODE_87189_length_184_cov_1.167785_g79248_i0forward_frame_2 - 0.058 12.1 0.7 0.058 12.1 0.7 1.0 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E VWA_N2 PF16164.5 NODE_87188_length_184_cov_1.167785_g79247_i0reverse_frame_2 - 0.058 13.5 0.0 0.077 13.1 0.0 1.2 1 0 0 1 1 1 0 VWA N-terminal Auxin_canalis PF05703.11 NODE_87178_length_184_cov_1.194631_g79237_i0forward_frame_3 - 0.036 14.0 0.1 0.038 13.9 0.1 1.0 1 0 0 1 1 1 0 Auxin canalisation VitD-bind_III PF09164.10 NODE_87170_length_184_cov_1.234899_g79229_i0reverse_frame_2 - 2.9 8.0 6.1 6 6.9 0.3 2.2 2 0 0 2 2 2 0 Vitamin D binding protein, domain III SSI PF00720.17 NODE_87167_length_184_cov_1.255034_g79226_i0reverse_frame_2 - 0.02 14.8 0.2 0.021 14.7 0.2 1.1 1 0 0 1 1 1 0 Subtilisin inhibitor-like rve PF00665.26 NODE_87167_length_184_cov_1.255034_g79226_i0forward_frame_2 - 0.046 13.9 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 Integrase core domain BRD4_CDT PF17105.5 NODE_87167_length_184_cov_1.255034_g79226_i0forward_frame_2 - 0.052 13.2 0.0 0.076 12.6 0.0 1.2 1 0 0 1 1 1 0 C-terminal domain of bromodomain protein 4 DUF3177 PF11375.8 NODE_87166_length_184_cov_1.255034_g79225_i0reverse_frame_3 - 0.0099 15.7 1.4 0.01 15.7 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3177) Tubulin PF00091.25 NODE_87166_length_184_cov_1.255034_g79225_i0reverse_frame_2 - 3.9e-08 33.7 0.0 4.2e-08 33.6 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Prot_inhib_II PF02428.15 NODE_87162_length_184_cov_1.268456_g79221_i0reverse_frame_3 - 0.035 14.5 3.7 1.2 9.7 1.3 2.2 2 0 0 2 2 2 0 Potato type II proteinase inhibitor family LAB_N PF07578.11 NODE_87162_length_184_cov_1.268456_g79221_i0reverse_frame_3 - 0.066 13.3 0.1 0.084 13.0 0.1 1.3 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain PXB PF12828.7 NODE_87161_length_184_cov_1.268456_g79220_i0forward_frame_2 - 0.078 13.0 0.1 0.08 12.9 0.1 1.1 1 0 0 1 1 1 0 PX-associated DUF222 PF02720.17 NODE_87158_length_184_cov_1.268456_g79217_i0forward_frame_2 - 0.073 12.5 0.2 0.076 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF222) YfkB PF08756.10 NODE_87154_length_184_cov_1.281879_g79213_i0forward_frame_3 - 0.097 12.5 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 YfkB-like domain N-glycanase_C PF09113.10 NODE_87154_length_184_cov_1.281879_g79213_i0forward_frame_3 - 2.4 8.0 4.5 2.7 7.8 0.9 2.0 1 1 1 2 2 2 0 Peptide-N-glycosidase F, C terminal DUF5352 PF17303.2 NODE_87152_length_184_cov_1.281879_g79211_i0forward_frame_3 - 0.0021 17.9 0.1 0.0023 17.8 0.1 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5352) Requiem_N PF14051.6 NODE_87150_length_184_cov_1.308725_g79209_i0forward_frame_3 - 0.15 12.3 0.1 0.17 12.1 0.1 1.1 1 0 0 1 1 1 0 N-terminal domain of DPF2/REQ. Pyr_redox_2 PF07992.14 NODE_87142_length_184_cov_1.335570_g79201_i0reverse_frame_3 - 1.4e-07 31.1 0.0 1.4e-07 31.1 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_87142_length_184_cov_1.335570_g79201_i0reverse_frame_3 - 3.5e-05 24.3 1.2 4.8e-05 23.8 1.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GA-like PF17573.2 NODE_87142_length_184_cov_1.335570_g79201_i0reverse_frame_3 - 0.15 12.0 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 GA-like domain DUF2185 PF09951.9 NODE_87142_length_184_cov_1.335570_g79201_i0reverse_frame_2 - 0.089 12.6 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2185) SecIII_SopE_N PF05364.14 NODE_87142_length_184_cov_1.335570_g79201_i0forward_frame_3 - 0.095 12.8 0.1 0.17 11.9 0.1 1.4 1 0 0 1 1 1 0 Salmonella type III secretion SopE effector N-terminus DUF3916 PF13079.6 NODE_87136_length_184_cov_1.335570_g79195_i0reverse_frame_3 - 0.06 13.2 2.1 0.06 13.2 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) DUF643 PF04867.12 NODE_87136_length_184_cov_1.335570_g79195_i0forward_frame_3 - 0.00065 20.3 1.7 0.00074 20.1 1.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF643) Pkinase PF00069.25 NODE_87135_length_184_cov_1.335570_g79194_i0reverse_frame_2 - 9e-08 31.8 0.0 1e-07 31.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF2259 PF10016.9 NODE_87129_length_184_cov_1.342282_g79188_i0reverse_frame_3 - 0.28 11.1 3.3 0.3 11.0 3.3 1.0 1 0 0 1 1 1 0 Predicted secreted protein (DUF2259) VGCC_beta4Aa_N PF12052.8 NODE_87129_length_184_cov_1.342282_g79188_i0reverse_frame_3 - 1.1 9.4 13.6 0.27 11.4 2.9 2.3 2 0 0 2 2 2 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal IspD PF01128.19 NODE_87120_length_184_cov_1.362416_g79179_i0forward_frame_3 - 0.0021 17.8 0.0 0.0024 17.6 0.0 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF1281 PF06924.11 NODE_87119_length_184_cov_1.362416_g79178_i0forward_frame_2 - 0.11 12.0 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) Histone_H2A_C PF16211.5 NODE_87118_length_184_cov_1.375839_g79177_i0forward_frame_3 - 0.12 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Scs3p PF10261.9 NODE_87118_length_184_cov_1.375839_g79177_i0forward_frame_2 - 0.016 14.7 1.9 0.017 14.6 1.9 1.1 1 0 0 1 1 1 0 Inositol phospholipid synthesis and fat-storage-inducing TM E_raikovi_mat PF06360.11 NODE_87116_length_184_cov_1.382550_g79175_i0reverse_frame_2 - 0.13 12.7 1.3 0.13 12.7 1.3 2.0 2 0 0 2 2 2 0 Euplotes raikovi mating pheromone NAAA-beta PF15508.6 NODE_87116_length_184_cov_1.382550_g79175_i0forward_frame_2 - 0.072 13.4 0.0 0.11 12.8 0.0 1.2 1 0 0 1 1 1 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase RsgA_N PF16745.5 NODE_87114_length_184_cov_1.395973_g79173_i0reverse_frame_2 - 0.13 12.0 0.5 0.13 12.0 0.5 1.5 1 1 1 2 2 2 0 RsgA N-terminal domain GST_N_2 PF13409.6 NODE_87113_length_184_cov_1.409396_g79172_i0reverse_frame_2 - 0.087 13.1 0.0 0.098 13.0 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain RVT_1 PF00078.27 NODE_87107_length_184_cov_1.429530_g79166_i0forward_frame_2 - 0.00064 19.3 0.1 0.00065 19.3 0.1 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Hepar_II_III_N PF16889.5 NODE_87105_length_184_cov_1.442953_g79164_i0forward_frame_3 - 0.072 12.3 0.1 0.084 12.1 0.1 1.0 1 0 0 1 1 1 0 Heparinase II/III N-terminus DUF2695 PF10905.8 NODE_87104_length_184_cov_1.449664_g79163_i0reverse_frame_2 - 0.005 17.0 0.6 0.76 10.1 0.1 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF2695) Defensin_int PF17858.1 NODE_87101_length_184_cov_1.476510_g79160_i0forward_frame_2 - 0.0014 18.5 0.9 0.003 17.5 0.9 1.7 1 0 0 1 1 1 1 Platypus intermediate defensin-like peptide Ubie_methyltran PF01209.18 NODE_87100_length_184_cov_1.483221_g79159_i0forward_frame_3 - 0.0015 17.9 0.0 0.0015 17.9 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 NODE_87100_length_184_cov_1.483221_g79159_i0forward_frame_3 - 0.0022 18.6 0.0 0.0022 18.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_87100_length_184_cov_1.483221_g79159_i0forward_frame_3 - 0.012 16.3 0.0 0.012 16.3 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Transketolase_N PF00456.21 NODE_87098_length_184_cov_1.496644_g79157_i0reverse_frame_3 - 0.14 11.1 0.0 0.14 11.0 0.0 1.0 1 0 0 1 1 1 0 Transketolase, thiamine diphosphate binding domain Chromo PF00385.24 NODE_87088_length_184_cov_1.550336_g79147_i0reverse_frame_3 - 0.016 15.1 2.9 0.025 14.5 2.9 1.3 1 0 0 1 1 1 0 Chromo (CHRromatin Organisation MOdifier) domain VP7 PF00434.18 NODE_87088_length_184_cov_1.550336_g79147_i0forward_frame_3 - 0.071 12.2 5.7 0.084 12.0 5.7 1.1 1 0 0 1 1 1 0 Glycoprotein VP7 Zn_Tnp_IS91 PF14319.6 NODE_87086_length_184_cov_1.557047_g79145_i0forward_frame_2 - 0.038 14.0 0.1 0.038 14.0 0.1 1.4 2 0 0 2 2 2 0 Transposase zinc-binding domain COE1_DBD PF16422.5 NODE_87084_length_184_cov_1.557047_g79143_i0forward_frame_3 - 0.06 12.8 1.3 0.065 12.7 1.3 1.1 1 0 0 1 1 1 0 Transcription factor COE1 DNA-binding domain UvrA_DNA-bind PF17755.1 NODE_87083_length_184_cov_1.557047_g79142_i0reverse_frame_2 - 0.13 12.6 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 UvrA DNA-binding domain DUF5340 PF17275.2 NODE_87079_length_184_cov_1.563758_g79138_i0reverse_frame_3 - 0.051 13.7 0.2 0.055 13.6 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5340) ATG11 PF10377.9 NODE_87076_length_184_cov_1.583893_g79135_i0forward_frame_3 - 0.18 11.8 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Autophagy-related protein 11 VKOR PF07884.14 NODE_87074_length_184_cov_1.583893_g79133_i0reverse_frame_3 - 0.019 15.1 0.6 0.022 14.9 0.6 1.2 1 0 0 1 1 1 0 Vitamin K epoxide reductase family SMRP1 PF15181.6 NODE_87074_length_184_cov_1.583893_g79133_i0reverse_frame_3 - 0.095 12.3 1.1 0.1 12.2 1.1 1.0 1 0 0 1 1 1 0 Spermatid-specific manchette-related protein 1 XAF1_C PF18608.1 NODE_87074_length_184_cov_1.583893_g79133_i0reverse_frame_2 - 0.0011 18.4 0.3 0.0016 18.0 0.3 1.2 1 0 0 1 1 1 1 XIAP-associated factor 1 C-terminal domain zf_UBZ PF18439.1 NODE_87074_length_184_cov_1.583893_g79133_i0reverse_frame_2 - 0.023 14.3 0.2 0.023 14.3 0.2 1.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger SpoVAC_SpoVAEB PF03862.13 NODE_87073_length_184_cov_1.590604_g79132_i0forward_frame_2 - 0.069 13.4 0.5 0.074 13.3 0.5 1.1 1 0 0 1 1 1 0 SpoVAC/SpoVAEB sporulation membrane protein MFS_1 PF07690.16 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 2.5e-05 23.4 0.4 2.5e-05 23.4 0.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily LacY_symp PF01306.19 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 0.0012 17.7 0.0 0.0013 17.6 0.0 1.0 1 0 0 1 1 1 1 LacY proton/sugar symporter OATP PF03137.20 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 0.0024 16.2 0.6 0.0024 16.2 0.6 1.0 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family MFS_2 PF13347.6 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 0.0034 16.0 0.4 0.0036 15.9 0.4 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein Sugar_tr PF00083.24 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 0.0036 16.2 0.3 0.0036 16.2 0.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF4064 PF13273.6 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_3 - 0.024 14.9 1.9 0.028 14.7 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) Pox_A14 PF05767.12 NODE_87060_length_184_cov_1.610738_g79119_i0reverse_frame_2 - 0.0064 16.6 0.3 0.0064 16.6 0.3 1.1 1 0 0 1 1 1 1 Poxvirus virion envelope protein A14 SAMP PF05924.11 NODE_87056_length_184_cov_1.610738_g79115_i0forward_frame_2 - 0.17 11.2 0.1 0.17 11.2 0.1 2.0 2 0 0 2 2 2 0 SAMP Motif ABC_membrane PF00664.23 NODE_87049_length_184_cov_1.610738_g79108_i0forward_frame_2 - 0.027 14.1 0.0 0.035 13.8 0.0 1.0 1 0 0 1 1 1 0 ABC transporter transmembrane region MGC-24 PF05283.11 NODE_87046_length_184_cov_1.610738_g79105_i0reverse_frame_2 - 0.15 12.5 0.4 0.15 12.5 0.4 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin mRNA_decap_C PF16741.5 NODE_87045_length_184_cov_1.610738_g79104_i0reverse_frame_3 - 0.069 12.5 1.3 0.11 11.8 1.3 1.3 1 0 0 1 1 1 0 mRNA-decapping enzyme C-terminus Caveolin PF01146.17 NODE_87045_length_184_cov_1.610738_g79104_i0forward_frame_2 - 0.12 12.4 0.5 0.12 12.4 0.5 1.1 1 0 0 1 1 1 0 Caveolin DUF3439 PF11921.8 NODE_87044_length_184_cov_1.610738_g79103_i0forward_frame_2 - 0.085 12.8 0.5 0.11 12.5 0.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) HET-s_218-289 PF11558.8 NODE_87040_length_184_cov_1.644295_g79099_i0forward_frame_2 - 0.08 13.0 0.0 0.15 12.1 0.0 1.4 2 0 0 2 2 2 0 Het-s 218-289 PsiB PF06290.11 NODE_87037_length_184_cov_1.664430_g79096_i0forward_frame_3 - 0.013 15.0 0.0 0.013 15.0 0.0 1.0 1 0 0 1 1 1 0 Plasmid SOS inhibition protein (PsiB) Amnionless PF14828.6 NODE_87034_length_184_cov_1.704698_g79093_i0reverse_frame_2 - 0.24 10.2 1.1 0.28 10.0 1.1 1.0 1 0 0 1 1 1 0 Amnionless FATC PF02260.20 NODE_87033_length_184_cov_1.711409_g79092_i0reverse_frame_2 - 0.087 12.7 0.3 0.17 11.7 0.1 1.6 2 0 0 2 2 2 0 FATC domain Tombus_movement PF05318.12 NODE_87028_length_184_cov_1.731544_g79087_i0reverse_frame_2 - 0.12 13.2 7.0 0.32 11.8 7.0 1.8 1 1 0 1 1 1 0 Tombusvirus movement protein LisH PF08513.11 NODE_87027_length_184_cov_1.738255_g79086_i0forward_frame_3 - 0.07 13.1 0.3 0.09 12.8 0.3 1.2 1 0 0 1 1 1 0 LisH DUF5576 PF17739.1 NODE_87025_length_184_cov_1.751678_g79084_i0reverse_frame_3 - 0.1 12.7 0.4 0.1 12.7 0.4 1.5 1 1 1 2 2 2 0 Family of unknown function (DUF5576) RGS12_us2 PF16611.5 NODE_87023_length_184_cov_1.765101_g79082_i0forward_frame_3 - 0.098 13.1 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 Unstructured region between RBD and GoLoco DUF2321 PF10083.9 NODE_87022_length_184_cov_1.765101_g79081_i0forward_frame_2 - 0.098 12.3 0.4 0.11 12.2 0.4 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) EBP PF05241.12 NODE_87019_length_184_cov_1.785235_g79078_i0forward_frame_3 - 0.049 13.1 1.5 0.056 12.9 1.5 1.1 1 0 0 1 1 1 0 Emopamil binding protein zf-C2H2_11 PF16622.5 NODE_87016_length_184_cov_1.818792_g79075_i0reverse_frame_2 - 0.16 11.7 0.4 0.16 11.7 0.4 1.7 2 0 0 2 2 2 0 zinc-finger C2H2-type UCH PF00443.29 NODE_87016_length_184_cov_1.818792_g79075_i0forward_frame_2 - 0.011 15.3 0.0 0.011 15.3 0.0 1.0 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Chitin_synth_1 PF01644.17 NODE_87015_length_184_cov_1.825503_g79074_i0forward_frame_2 - 5.7e-15 55.7 0.0 5.7e-15 55.7 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase HU-CCDC81_euk_2 PF18289.1 NODE_87013_length_184_cov_1.838926_g79072_i0reverse_frame_3 - 0.0043 17.2 0.1 0.0059 16.7 0.1 1.2 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 Kazal_2 PF07648.15 NODE_87011_length_184_cov_1.845638_g79070_i0forward_frame_2 - 0.056 13.6 2.5 0.087 13.0 1.7 1.8 1 1 1 2 2 2 0 Kazal-type serine protease inhibitor domain DUF2321 PF10083.9 NODE_87009_length_184_cov_1.865772_g79068_i0reverse_frame_2 - 0.36 10.4 3.9 0.41 10.3 3.9 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) Mtd_N PF18454.1 NODE_87008_length_184_cov_1.865772_g79067_i0reverse_frame_2 - 0.19 11.8 0.1 14 5.8 0.0 2.1 2 0 0 2 2 2 0 Major tropism determinant N-terminal domain Avl9 PF09794.9 NODE_87007_length_184_cov_1.872483_g79066_i0reverse_frame_3 - 1e-11 44.2 0.0 1.1e-11 44.0 0.0 1.0 1 0 0 1 1 1 1 Transport protein Avl9 Afi1 PF07792.12 NODE_87007_length_184_cov_1.872483_g79066_i0reverse_frame_3 - 7.7e-06 26.4 0.0 8.4e-06 26.3 0.0 1.0 1 0 0 1 1 1 1 Docking domain of Afi1 for Arf3 in vesicle trafficking DUF2347 PF09804.9 NODE_87007_length_184_cov_1.872483_g79066_i0reverse_frame_3 - 0.085 12.4 0.0 0.089 12.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2347) APG17 PF04108.12 NODE_87006_length_184_cov_1.872483_g79065_i0forward_frame_3 - 0.017 14.2 0.1 0.017 14.2 0.1 1.0 1 0 0 1 1 1 0 Autophagy protein Apg17 MbeB_N PF04837.12 NODE_87006_length_184_cov_1.872483_g79065_i0forward_frame_3 - 0.025 14.9 0.6 0.035 14.4 0.6 1.1 1 0 0 1 1 1 0 MbeB-like, N-term conserved region Med8 PF10232.9 NODE_87006_length_184_cov_1.872483_g79065_i0forward_frame_3 - 0.076 12.6 0.1 0.085 12.4 0.1 1.1 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 Ion_trans_2 PF07885.16 NODE_87004_length_184_cov_1.879195_g79063_i0forward_frame_2 - 2.8e-11 43.2 5.6 3e-11 43.1 5.6 1.0 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 NODE_87004_length_184_cov_1.879195_g79063_i0forward_frame_2 - 0.0014 17.9 1.9 0.0014 17.9 1.9 1.0 1 0 0 1 1 1 1 Ion transport protein DUF4902 PF16245.5 NODE_87003_length_184_cov_1.879195_g79062_i0reverse_frame_2 - 0.046 13.6 0.0 0.046 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4902) Cir_N PF10197.9 NODE_87001_length_184_cov_1.932886_g79060_i0reverse_frame_3 - 0.022 15.0 0.8 0.03 14.5 0.4 1.6 2 0 0 2 2 2 0 N-terminal domain of CBF1 interacting co-repressor CIR Presenilin PF01080.17 NODE_87001_length_184_cov_1.932886_g79060_i0forward_frame_3 - 2.1 7.0 6.0 2.3 6.9 6.0 1.0 1 0 0 1 1 1 0 Presenilin DUF3116 PF11313.8 NODE_87000_length_184_cov_1.939597_g79059_i0reverse_frame_2 - 0.076 12.9 0.0 0.08 12.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) p450 PF00067.22 NODE_86996_length_184_cov_1.973154_g79055_i0reverse_frame_3 - 0.0044 15.8 0.1 0.0045 15.8 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 KTI12 PF08433.10 NODE_86996_length_184_cov_1.973154_g79055_i0reverse_frame_2 - 0.13 11.7 0.4 0.13 11.7 0.4 1.0 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Ribosomal_S3Ae PF01015.18 NODE_86996_length_184_cov_1.973154_g79055_i0reverse_frame_2 - 0.16 11.6 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 Ribosomal S3Ae family GET2 PF08690.10 NODE_86996_length_184_cov_1.973154_g79055_i0forward_frame_3 - 0.25 11.0 0.7 0.27 10.9 0.7 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 OmpW PF03922.14 NODE_86994_length_184_cov_1.986577_g79053_i0reverse_frame_3 - 5.7e-22 78.5 0.1 6.1e-22 78.4 0.1 1.0 1 0 0 1 1 1 1 OmpW family OprF PF05736.11 NODE_86994_length_184_cov_1.986577_g79053_i0reverse_frame_3 - 0.014 15.2 0.0 0.015 15.1 0.0 1.1 1 0 0 1 1 1 0 OprF membrane domain Phage_T4_Gp30_7 PF06919.11 NODE_86994_length_184_cov_1.986577_g79053_i0forward_frame_2 - 0.07 13.3 0.0 0.084 13.0 0.0 1.1 1 0 0 1 1 1 0 Phage Gp30.7 protein Cas_Csy1 PF09611.10 NODE_86992_length_184_cov_2.000000_g79051_i0reverse_frame_3 - 0.17 10.9 0.2 0.15 11.1 0.2 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) DUF5409 PF17421.2 NODE_86991_length_184_cov_2.013423_g79050_i0reverse_frame_3 - 0.033 14.9 0.4 0.037 14.7 0.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) MFS_1 PF07690.16 NODE_86990_length_184_cov_2.013423_g79049_i0reverse_frame_3 - 0.00054 19.0 2.4 0.00055 19.0 2.4 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3792 PF12670.7 NODE_86990_length_184_cov_2.013423_g79049_i0reverse_frame_3 - 0.37 11.0 8.6 0.81 9.9 4.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3792) CK_II_beta PF01214.18 NODE_86989_length_184_cov_2.020134_g79048_i0reverse_frame_3 - 5.2e-05 23.1 2.2 5.5e-05 23.1 2.2 1.0 1 0 0 1 1 1 1 Casein kinase II regulatory subunit zf-HC5HC2H PF13771.6 NODE_86989_length_184_cov_2.020134_g79048_i0reverse_frame_3 - 0.0003 21.0 3.3 0.00044 20.5 3.4 1.3 1 1 0 1 1 1 1 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 NODE_86989_length_184_cov_2.020134_g79048_i0reverse_frame_3 - 0.00043 20.4 1.9 0.00068 19.8 2.0 1.3 1 1 0 1 1 1 1 PHD-zinc-finger like domain zf-RING_2 PF13639.6 NODE_86989_length_184_cov_2.020134_g79048_i0reverse_frame_3 - 0.025 14.9 3.6 0.031 14.6 3.6 1.2 1 0 0 1 1 1 0 Ring finger domain DUF4141 PF13605.6 NODE_86988_length_184_cov_2.040268_g79047_i0reverse_frame_2 - 0.077 12.2 0.0 0.14 11.4 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4141) TraI_2_C PF07515.11 NODE_86988_length_184_cov_2.040268_g79047_i0forward_frame_2 - 0.0087 16.0 0.1 0.01 15.8 0.1 1.0 1 0 0 1 1 1 1 Putative conjugal transfer nickase/helicase TraI C-term GreA_GreB PF01272.19 NODE_86982_length_184_cov_2.120805_g79041_i0reverse_frame_2 - 0.064 13.2 0.0 0.085 12.8 0.0 1.2 1 0 0 1 1 1 0 Transcription elongation factor, GreA/GreB, C-term LRRNT PF01462.18 NODE_86982_length_184_cov_2.120805_g79041_i0forward_frame_3 - 0.14 11.9 3.7 0.15 11.7 1.9 2.0 2 0 0 2 2 2 0 Leucine rich repeat N-terminal domain DUF1514 PF07438.11 NODE_86974_length_184_cov_2.147651_g79033_i0forward_frame_3 - 0.11 12.3 0.1 0.14 12.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1514) Tis11B_N PF04553.12 NODE_86974_length_184_cov_2.147651_g79033_i0forward_frame_2 - 0.063 13.8 0.0 0.065 13.8 0.0 1.1 1 0 0 1 1 1 0 Tis11B like protein, N terminus Kunitz_legume PF00197.18 NODE_86970_length_184_cov_2.167785_g79029_i0reverse_frame_2 - 0.02 14.8 0.2 0.021 14.8 0.2 1.0 1 0 0 1 1 1 0 Trypsin and protease inhibitor DUF2847 PF11009.8 NODE_86970_length_184_cov_2.167785_g79029_i0reverse_frame_2 - 0.14 12.1 0.1 0.18 11.7 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2847) Sorb PF02208.16 NODE_86969_length_184_cov_2.167785_g79028_i0reverse_frame_2 - 0.099 12.5 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 Sorbin homologous domain EMP70 PF02990.16 NODE_86968_length_184_cov_2.174497_g79027_i0reverse_frame_2 - 0.68 8.5 5.7 0.75 8.4 5.7 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 DUF536 PF04394.14 NODE_86963_length_184_cov_2.255034_g79022_i0reverse_frame_3 - 0.14 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF536 DUF1932 PF09130.11 NODE_86961_length_184_cov_2.255034_g79020_i0forward_frame_3 - 0.013 15.4 0.1 0.016 15.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1932) AAA_lid_11 PF18198.1 NODE_86960_length_184_cov_2.261745_g79019_i0reverse_frame_3 - 0.068 13.0 0.3 0.068 13.0 0.3 1.1 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain AFP PF02420.15 NODE_86959_length_184_cov_2.295302_g79018_i0reverse_frame_2 - 0.11 12.9 0.2 0.11 12.9 0.2 3.4 3 2 0 3 3 3 0 Insect antifreeze protein repeat Defensin_5 PF18251.1 NODE_86959_length_184_cov_2.295302_g79018_i0reverse_frame_2 - 0.38 10.9 12.1 0.31 11.1 1.3 2.5 2 1 0 2 2 2 0 Fungal defensin Copsin DUF5332 PF17266.2 NODE_86959_length_184_cov_2.295302_g79018_i0reverse_frame_2 - 2.7 7.7 16.1 0.86 9.3 7.4 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5332) LAX PF15681.5 NODE_86958_length_184_cov_2.308725_g79017_i0reverse_frame_2 - 0.081 11.7 2.3 0.093 11.5 2.3 1.0 1 0 0 1 1 1 0 Lymphocyte activation family X PrgI PF12666.7 NODE_86958_length_184_cov_2.308725_g79017_i0reverse_frame_2 - 0.8 10.5 8.5 0.89 10.3 8.5 1.1 1 0 0 1 1 1 0 PrgI family protein S_4TM PF18159.1 NODE_86958_length_184_cov_2.308725_g79017_i0reverse_frame_2 - 8.3 5.6 7.5 9.3 5.5 7.5 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain PIG-U PF06728.13 NODE_86958_length_184_cov_2.308725_g79017_i0forward_frame_3 - 0.025 13.6 1.1 0.025 13.7 1.1 1.0 1 0 0 1 1 1 0 GPI transamidase subunit PIG-U Mucin PF01456.17 NODE_86958_length_184_cov_2.308725_g79017_i0forward_frame_2 - 0.14 12.2 30.4 0.14 12.1 30.4 1.1 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF1702 PF08012.11 NODE_86958_length_184_cov_2.308725_g79017_i0forward_frame_2 - 2.8 6.7 8.0 3 6.6 8.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1702) Lambda_Bor PF06291.11 NODE_86956_length_184_cov_2.348993_g79015_i0reverse_frame_3 - 0.11 12.6 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Bor protein NOD2_WH PF17779.1 NODE_86956_length_184_cov_2.348993_g79015_i0forward_frame_2 - 0.069 13.5 0.0 0.089 13.1 0.0 1.2 1 0 0 1 1 1 0 NOD2 winged helix domain HydF_tetramer PF18133.1 NODE_86954_length_184_cov_2.389262_g79013_i0reverse_frame_3 - 0.11 12.2 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Hydrogen maturase F tetramerization domain zn-ribbon_14 PF16503.5 NODE_86953_length_184_cov_2.402685_g79012_i0reverse_frame_2 - 3.3 7.3 10.2 12 5.5 5.9 2.4 2 0 0 2 2 2 0 Zinc-ribbon Vps35 PF03635.17 NODE_86948_length_184_cov_2.416107_g79007_i0reverse_frame_2 - 4.9e-08 32.0 0.5 5e-08 32.0 0.5 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 V-ATPase_H_N PF03224.14 NODE_86948_length_184_cov_2.416107_g79007_i0reverse_frame_2 - 0.004 16.5 0.7 0.0047 16.3 0.7 1.0 1 0 0 1 1 1 1 V-ATPase subunit H Rep_2 PF01719.17 NODE_86947_length_184_cov_2.436242_g79006_i0reverse_frame_3 - 0.012 15.4 0.3 0.012 15.4 0.3 1.1 1 0 0 1 1 1 0 Plasmid replication protein Transposase_22 PF02994.14 NODE_86947_length_184_cov_2.436242_g79006_i0reverse_frame_3 - 0.042 14.0 0.0 0.042 14.0 0.0 1.1 1 0 0 1 1 1 0 L1 transposable element RBD-like domain DUF692 PF05114.13 NODE_86945_length_184_cov_2.449664_g79004_i0reverse_frame_2 - 0.022 14.0 0.0 0.024 13.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF692) DUF1902 PF08972.11 NODE_86945_length_184_cov_2.449664_g79004_i0reverse_frame_2 - 0.086 12.8 0.0 0.095 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1902) FerA PF08165.11 NODE_86945_length_184_cov_2.449664_g79004_i0reverse_frame_2 - 0.086 12.8 0.2 0.11 12.5 0.2 1.3 1 0 0 1 1 1 0 FerA (NUC095) domain SWIRM-assoc_2 PF16496.5 NODE_86942_length_184_cov_2.489933_g79001_i0forward_frame_3 - 0.032 13.1 5.7 0.03 13.2 5.7 1.0 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal DUF2457 PF10446.9 NODE_86942_length_184_cov_2.489933_g79001_i0forward_frame_3 - 0.91 8.6 7.5 0.88 8.7 7.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF3716 PF12511.8 NODE_86941_length_184_cov_2.496644_g79000_i0reverse_frame_3 - 0.052 13.6 1.1 0.08 13.0 1.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3716) HopJ PF08888.11 NODE_86941_length_184_cov_2.496644_g79000_i0forward_frame_3 - 0.082 13.2 0.0 0.09 13.0 0.0 1.1 1 0 0 1 1 1 0 HopJ type III effector protein Sec62 PF03839.16 NODE_86939_length_184_cov_2.557047_g78998_i0forward_frame_3 - 0.43 10.0 3.0 0.49 9.9 3.0 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 Pkinase PF00069.25 NODE_86937_length_184_cov_2.624161_g78996_i0forward_frame_3 - 0.015 14.7 0.0 0.015 14.7 0.0 1.0 1 0 0 1 1 1 0 Protein kinase domain HV_small_capsid PF17086.5 NODE_86936_length_184_cov_2.624161_g78995_i0reverse_frame_3 - 0.17 12.2 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 Small capsid protein of Herpesviridae Folate_carrier PF01770.18 NODE_86933_length_184_cov_2.677852_g78992_i0reverse_frame_3 - 0.13 10.9 0.0 0.13 10.9 0.0 1.0 1 0 0 1 1 1 0 Reduced folate carrier PLD_C PF12357.8 NODE_86931_length_184_cov_2.684564_g78990_i0forward_frame_3 - 0.18 11.8 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Phospholipase D C terminal Prim_Zn_Ribbon PF08273.12 NODE_86931_length_184_cov_2.684564_g78990_i0forward_frame_2 - 0.045 14.0 0.9 0.074 13.3 0.9 1.4 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase LysR_substrate PF03466.20 NODE_86925_length_184_cov_2.818792_g78984_i0reverse_frame_3 - 4.2e-09 36.1 0.0 4.6e-09 35.9 0.0 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Kelch_5 PF13854.6 NODE_86923_length_184_cov_2.885906_g78982_i0reverse_frame_2 - 4e-05 23.5 0.0 4.9e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_6 PF13964.6 NODE_86923_length_184_cov_2.885906_g78982_i0reverse_frame_2 - 0.0026 18.0 0.0 0.003 17.8 0.0 1.2 1 0 0 1 1 1 1 Kelch motif Kelch_4 PF13418.6 NODE_86923_length_184_cov_2.885906_g78982_i0reverse_frame_2 - 0.008 16.2 0.0 0.0099 15.9 0.0 1.3 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_1 PF01344.25 NODE_86923_length_184_cov_2.885906_g78982_i0reverse_frame_2 - 0.088 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Kelch motif DUF1899 PF08953.11 NODE_86922_length_184_cov_2.899329_g78981_i0reverse_frame_2 - 0.062 13.2 0.0 0.072 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1899) ThrE_2 PF12821.7 NODE_86921_length_184_cov_2.912752_g78980_i0forward_frame_3 - 0.039 14.1 0.8 0.042 14.0 0.8 1.1 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE VESA1_N PF12785.7 NODE_86920_length_184_cov_2.926174_g78979_i0forward_frame_2 - 3.1 6.7 11.3 3.1 6.6 11.3 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 Lamprin PF06403.11 NODE_86919_length_184_cov_3.060403_g78978_i0forward_frame_3 - 0.46 10.4 9.2 1.3 8.9 9.2 1.7 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_86919_length_184_cov_3.060403_g78978_i0forward_frame_2 - 0.29 11.1 7.6 0.73 9.8 7.6 1.6 1 1 0 1 1 1 0 Lamprin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks449.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks449.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks449.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks449.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:44:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ion_trans PF00520.31 ORF136566 - 1.1e-09 37.9 9.7 1.5e-09 37.4 9.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF136566 - 5.1e-07 29.1 0.1 0.027 14.4 0.0 2.8 2 1 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF136566 - 3e-05 23.2 0.2 0.07 12.7 0.1 2.9 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 ORF136566 - 0.00016 21.0 0.3 0.19 11.3 0.0 3.3 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF136566 - 0.00037 20.3 0.2 0.014 15.2 0.2 2.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF136566 - 0.00048 20.5 0.0 0.0011 19.4 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain pair PilJ PF13675.6 ORF136566 - 0.064 13.3 0.0 0.14 12.2 0.0 1.6 1 1 0 1 1 1 0 Type IV pili methyl-accepting chemotaxis transducer N-term BCIP PF13862.6 ORF136566 - 0.077 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 p21-C-terminal region-binding protein DUF3671 PF12420.8 ORF136566 - 2.5 8.2 5.4 11 6.2 5.5 2.0 1 1 0 1 1 1 0 Protein of unknown function FGF PF00167.18 ORF134760 - 0.0047 17.0 0.0 3.8 7.7 0.0 3.1 2 1 1 3 3 3 2 Fibroblast growth factor RicinB_lectin_2 PF14200.6 ORF134760 - 0.021 15.5 0.0 3.2 8.5 0.0 3.1 1 1 3 4 4 4 0 Ricin-type beta-trefoil lectin domain-like DUF1521 PF07481.11 ORF134760 - 0.074 13.0 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1521) Lyase_1 PF00206.20 ORF133986 - 8.2e-90 301.4 0.0 1.1e-89 301.0 0.0 1.2 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 ORF133986 - 8.6e-27 93.3 0.3 1.9e-26 92.2 0.3 1.6 1 0 0 1 1 1 1 Fumarase C C-terminus RabGAP-TBC PF00566.18 ORF130927 - 7.8e-39 133.6 3.5 1.1e-38 133.0 3.5 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain SHIPPO-rpt PF07004.12 ORF130883 - 9e-31 105.4 80.6 1.7e-06 28.7 3.7 10.5 10 0 0 10 10 10 10 Sperm-tail PG-rich repeat DDE_Tnp_1 PF01609.21 ORF130541 - 1.4e-30 106.6 0.0 1.8e-30 106.2 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain Nterm_IS4 PF13006.7 ORF130541 - 6.9e-06 26.2 0.1 1.9e-05 24.7 0.1 1.8 1 0 0 1 1 1 1 Insertion element 4 transposase N-terminal DUF4164 PF13747.6 ORF130514 - 2.4e-05 24.5 7.9 0.025 14.8 5.3 3.1 2 1 1 3 3 3 2 Domain of unknown function (DUF4164) Phage_cap_E PF03864.15 ORF130514 - 0.74 8.9 4.5 0.51 9.5 0.1 2.2 2 0 0 2 2 2 0 Phage major capsid protein E Ca_chan_IQ PF08763.11 ORF130514 - 1.3 9.3 7.2 0.26 11.5 0.2 3.1 2 2 2 4 4 4 0 Voltage gated calcium channel IQ domain PFK PF00365.20 ORF128127 - 4e-07 29.6 0.0 0.00035 20.0 0.0 2.2 2 0 0 2 2 2 2 Phosphofructokinase zf-RING_2 PF13639.6 ORF119564 - 2.2e-10 40.7 4.6 4.6e-10 39.7 4.6 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF119564 - 1.8e-08 34.0 2.4 1.8e-08 34.0 2.4 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF119564 - 1.8e-06 27.7 3.2 4.2e-06 26.5 3.2 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF119564 - 8.6e-05 22.7 7.0 0.00032 20.9 7.0 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain Zn_ribbon_17 PF17120.5 ORF119564 - 0.0012 18.5 2.3 0.0027 17.3 2.3 1.6 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type DUF4064 PF13273.6 ORF119564 - 0.0013 18.9 2.3 0.0013 18.9 2.3 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF4064) zf-C3HC4 PF00097.25 ORF119564 - 0.0019 18.0 3.8 0.0052 16.6 3.8 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF119564 - 0.0039 17.1 3.0 0.0083 16.1 3.0 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF119564 - 0.0077 16.3 0.5 0.018 15.1 0.5 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger IRK PF01007.20 ORF119564 - 0.0091 15.8 7.5 0.0091 15.8 7.5 1.8 2 0 0 2 2 2 1 Inward rectifier potassium channel transmembrane domain DUF2189 PF09955.9 ORF119564 - 0.0098 16.1 0.8 0.023 15.0 0.8 1.7 1 0 0 1 1 1 1 Predicted integral membrane protein (DUF2189) zf-C3HC4_3 PF13920.6 ORF119564 - 0.014 15.2 2.4 0.031 14.1 2.4 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF2975 PF11188.8 ORF119564 - 0.024 14.5 0.7 0.024 14.5 0.7 2.5 2 1 1 3 3 2 0 Protein of unknown function (DUF2975) zf-C3H2C3 PF17122.5 ORF119564 - 0.025 14.6 0.9 0.068 13.2 0.9 1.7 1 0 0 1 1 1 0 Zinc-finger Prok-RING_4 PF14447.6 ORF119564 - 0.029 14.2 4.1 0.066 13.1 4.1 1.6 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 7tm_1 PF00001.21 ORF119564 - 0.053 12.8 8.5 0.024 14.0 5.8 1.6 1 1 1 2 2 2 0 7 transmembrane receptor (rhodopsin family) DUF2873 PF11395.8 ORF119564 - 0.067 13.1 0.3 0.067 13.1 0.3 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) zf-RING_UBOX PF13445.6 ORF119564 - 0.08 13.0 0.9 0.08 13.0 0.9 2.4 2 0 0 2 2 2 0 RING-type zinc-finger MSC PF09402.10 ORF119564 - 0.42 10.0 1.9 2.6 7.4 1.9 2.1 1 1 0 1 1 1 0 Man1-Src1p-C-terminal domain Prok-RING_1 PF14446.6 ORF119564 - 3.3 7.7 5.3 2.2 8.3 2.4 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 Trypsin_2 PF13365.6 ORF117062 - 2.2e-32 113.0 0.4 3.7e-32 112.3 0.4 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ PF00595.24 ORF117062 - 4.2e-30 103.9 8.0 1.7e-15 57.1 0.1 3.3 3 0 0 3 3 3 2 PDZ domain PDZ_2 PF13180.6 ORF117062 - 2.5e-27 95.0 1.5 5.9e-15 55.4 0.0 2.6 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF117062 - 6.1e-22 77.2 3.6 1.4e-10 40.9 0.0 2.9 3 0 0 3 3 3 2 PDZ domain Trypsin PF00089.26 ORF117062 - 3.6e-20 72.7 0.1 6e-20 72.0 0.1 1.3 1 0 0 1 1 1 1 Trypsin PDZ_1 PF12812.7 ORF117062 - 0.0014 18.6 0.1 0.33 11.0 0.0 2.5 2 0 0 2 2 2 1 PDZ-like domain Tricorn_PDZ PF14685.6 ORF117062 - 0.0045 16.9 2.6 1.1 9.2 0.1 3.4 3 1 0 3 3 3 2 Tricorn protease PDZ domain DUF3394 PF11874.8 ORF117062 - 0.026 14.2 0.9 0.4 10.3 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3394) Peptidase_S46 PF10459.9 ORF117062 - 0.19 10.3 2.1 0.23 10.1 0.7 1.7 2 0 0 2 2 2 0 Peptidase S46 Ion_trans PF00520.31 ORF114205 - 3.4e-24 85.4 23.4 4.6e-24 85.0 23.4 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF114205 - 2.2e-08 33.4 0.1 0.0035 17.2 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF114205 - 2.9e-08 32.7 0.1 0.0011 18.4 0.1 3.0 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF114205 - 1.7e-07 31.6 1.0 4.2e-05 23.9 0.1 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF114205 - 0.00032 20.5 0.0 0.16 11.9 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain pair CBM_20 PF00686.19 ORF114205 - 0.12 12.3 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Starch binding domain YMF19 PF02326.15 ORF114205 - 0.16 12.8 0.1 0.16 12.8 0.1 2.6 3 0 0 3 3 3 0 Plant ATP synthase F0 HemY_N PF07219.13 ORF114205 - 0.31 11.3 4.6 7.7 6.8 0.4 2.8 3 0 0 3 3 3 0 HemY protein N-terminus Sarcoglycan_1 PF04790.13 ORF114205 - 0.38 10.1 4.0 1.3 8.3 0.1 2.3 2 0 0 2 2 2 0 Sarcoglycan complex subunit protein PFK PF00365.20 ORF111401 - 4e-07 29.6 0.0 0.00035 20.0 0.0 2.2 2 0 0 2 2 2 2 Phosphofructokinase ADH_N PF08240.12 ORF10956 - 3.9e-29 100.7 0.7 6.9e-29 99.9 0.7 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF10956 - 5.9e-24 84.5 0.1 9.4e-24 83.8 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF10956 - 1.6e-09 37.5 0.0 2.3e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF10956 - 7.7e-06 27.0 0.0 1.5e-05 26.1 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 ORF10956 - 0.02 14.2 1.0 0.03 13.6 1.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 ORF10956 - 0.11 12.0 0.1 0.26 10.8 0.1 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pectate_lyase_3 PF12708.7 ORF10781 - 0.03 14.2 0.5 0.16 11.8 0.3 2.0 1 1 1 2 2 2 0 Pectate lyase superfamily protein LRR_4 PF12799.7 ORF10631 - 2.1e-32 110.6 28.2 4.9e-09 36.3 1.2 6.7 1 1 7 9 9 9 8 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF10631 - 5.2e-23 81.4 18.6 7.8e-10 38.5 0.9 3.2 1 1 2 3 3 3 3 Leucine-rich repeat LRR_8 PF13855.6 ORF10631 - 1.2e-18 66.6 19.1 8.1e-05 22.3 0.3 5.8 3 3 1 5 5 5 5 Leucine rich repeat LRR_6 PF13516.6 ORF10631 - 0.0028 17.6 18.0 0.29 11.3 0.0 6.4 7 0 0 7 7 7 2 Leucine Rich repeat DrrA_P4M PF14860.6 ORF10631 - 1.2 9.1 9.1 0.62 9.9 2.8 3.1 1 1 1 3 3 3 0 DrrA phosphatidylinositol 4-phosphate binding domain LRR_1 PF00560.33 ORF10631 - 6.8 7.7 14.8 1.7e+02 3.4 0.0 6.5 6 2 1 7 7 7 0 Leucine Rich Repeat Nicastrin PF05450.15 ORF102382 - 0.077 12.5 4.7 0.071 12.6 3.3 1.7 1 1 0 1 1 1 0 Nicastrin TMEM154 PF15102.6 ORF93261 - 0.0097 15.8 0.0 0.071 13.0 0.0 2.2 2 0 0 2 2 2 1 TMEM154 protein family DUF641 PF04859.12 ORF91035 - 0.05 13.9 3.3 0.083 13.2 3.3 1.3 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) DivIC PF04977.15 ORF91035 - 0.1 12.4 7.6 1.9 8.3 3.3 3.3 2 1 1 3 3 3 0 Septum formation initiator DUF4407 PF14362.6 ORF91035 - 0.27 10.5 3.6 0.38 10.1 3.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4763 PF15960.5 ORF91035 - 0.31 10.3 9.2 3.2 7.0 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4763) DUF724 PF05266.14 ORF91035 - 1.5 8.6 9.5 3.4 7.4 9.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF724) SlyX PF04102.12 ORF91035 - 1.9 9.2 5.3 0.59 10.8 1.4 2.2 2 0 0 2 2 2 0 SlyX Fez1 PF06818.15 ORF8822 - 0.13 12.8 26.9 0.27 11.6 26.9 1.5 1 0 0 1 1 1 0 Fez1 FPP PF05911.11 ORF8822 - 0.13 10.5 32.9 0.19 9.9 32.9 1.1 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil V_ATPase_I PF01496.19 ORF8822 - 0.14 10.1 12.5 0.15 9.9 12.5 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Lant_dehydr_C PF14028.6 ORF8822 - 0.26 10.8 1.7 0.42 10.1 1.7 1.4 1 1 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term Fib_alpha PF08702.10 ORF8822 - 0.77 9.9 28.0 0.032 14.4 9.2 2.6 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family HOOK PF05622.12 ORF8822 - 1.4 7.0 32.9 2.1 6.4 32.9 1.2 1 0 0 1 1 1 0 HOOK protein Exonuc_VII_L PF02601.15 ORF8822 - 2.1 7.8 20.3 3.7 7.0 20.3 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit Phage_HK97_TLTM PF06120.11 ORF8822 - 3.2 6.9 24.1 5.2 6.2 24.1 1.5 1 0 0 1 1 1 0 Tail length tape measure protein CALCOCO1 PF07888.11 ORF8822 - 3.5 6.4 27.8 5.8 5.7 27.8 1.3 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like SlyX PF04102.12 ORF8822 - 7.1 7.3 16.0 25 5.6 7.3 3.5 1 1 1 2 2 2 0 SlyX DUF1275 PF06912.11 ORF87933 - 2e-19 70.3 6.3 2.7e-19 69.8 6.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Abhydrolase_3 PF07859.13 ORF86802 - 2.2e-40 138.7 0.0 2.9e-40 138.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF86802 - 1.5e-12 47.1 0.0 1.1e-10 40.9 0.0 2.2 2 0 0 2 2 2 2 Steryl acetyl hydrolase Hydrolase_4 PF12146.8 ORF86802 - 0.00011 21.5 0.0 0.00037 19.8 0.0 1.9 1 1 1 2 2 2 1 Serine aminopeptidase, S33 PHR PF08005.12 ORF86785 - 2.4e-17 64.0 1.8 2.4e-17 64.0 1.8 1.7 2 0 0 2 2 2 1 PHR domain WW_like PF17890.1 ORF86785 - 0.015 15.3 0.4 2.4 8.3 0.0 2.6 2 0 0 2 2 2 0 Peptidoglycan hydrolase LytB WW-like domain Lipase_3 PF01764.25 ORF8211 - 7.1e-25 87.5 0.0 1.2e-24 86.8 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 ORF8211 - 0.0052 16.5 0.0 0.014 15.1 0.0 1.8 3 0 0 3 3 3 1 PGAP1-like protein DUF676 PF05057.14 ORF8211 - 0.096 12.2 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF8211 - 0.099 12.5 0.0 0.19 11.6 0.0 1.5 2 0 0 2 2 2 0 Palmitoyl protein thioesterase Epimerase PF01370.21 ORF77056 - 3.9e-22 78.9 0.0 5.6e-22 78.4 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF77056 - 1e-20 73.9 0.0 1.4e-20 73.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF77056 - 2.8e-12 46.7 0.1 4.7e-12 45.9 0.1 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF77056 - 1.4e-11 44.0 0.1 5.2e-11 42.2 0.1 1.8 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF77056 - 2.5e-11 43.8 0.0 3.8e-11 43.2 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF77056 - 6.7e-09 35.3 0.1 1.1e-08 34.6 0.1 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF77056 - 1.4e-05 25.1 0.2 5.7e-05 23.1 0.0 2.0 2 1 0 2 2 2 1 KR domain adh_short PF00106.25 ORF77056 - 0.0025 17.3 2.8 0.087 12.3 1.6 2.8 2 1 0 2 2 2 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF77056 - 0.016 15.4 0.2 0.1 12.8 0.0 2.1 1 1 1 2 2 2 0 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 ORF77056 - 0.073 13.2 0.1 0.21 11.7 0.1 1.8 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus MFS_1 PF07690.16 ORF70245 - 4.4e-24 85.1 25.3 4.8e-19 68.5 17.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF70245 - 1.6e-12 47.4 13.5 2.1e-12 47.0 13.5 1.1 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 ORF70245 - 0.00036 19.2 1.9 0.00049 18.8 1.0 1.7 1 1 0 1 1 1 1 MFS/sugar transport protein MARVEL PF01284.23 ORF70245 - 0.0034 17.4 2.5 0.0034 17.4 2.5 3.4 1 1 2 3 3 3 1 Membrane-associating domain EphA2_TM PF14575.6 ORF70245 - 0.073 14.0 0.0 30 5.6 0.0 2.6 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Pam17 PF08566.10 ORF70245 - 0.31 10.9 0.4 7.1 6.5 0.0 2.2 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 ATG22 PF11700.8 ORF70245 - 0.45 9.1 7.5 0.34 9.5 4.1 2.3 1 1 0 2 2 2 0 Vacuole effluxer Atg22 like EamA PF00892.20 ORF67392 - 2.9e-19 69.6 31.2 3.1e-14 53.3 13.3 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF423 PF04241.15 ORF67392 - 0.3 11.3 11.6 2.8 8.2 0.1 3.9 2 2 2 4 4 4 0 Protein of unknown function (DUF423) PQQ_2 PF13360.6 ORF6435 - 1.8e-12 47.4 0.3 0.0002 21.0 0.0 3.5 2 2 1 3 3 3 3 PQQ-like domain PQQ PF01011.21 ORF6435 - 2.1e-09 36.9 0.8 0.0023 17.8 0.0 5.2 6 0 0 6 6 6 2 PQQ enzyme repeat PQQ_3 PF13570.6 ORF6435 - 7.2e-07 29.5 7.6 0.16 12.5 0.1 5.6 7 0 0 7 7 7 3 PQQ-like domain EF-hand_5 PF13202.6 ORF6435 - 0.0068 15.9 0.2 0.0068 15.9 0.2 1.8 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF6435 - 0.016 14.7 0.0 0.033 13.7 0.0 1.5 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF6435 - 0.14 12.2 0.0 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain DUF2012 PF09430.10 ORF6435 - 0.2 11.8 0.0 0.38 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2012) ATP-synt_B PF00430.18 ORF63144 - 1.1 9.4 5.4 0.32 11.1 0.4 2.1 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) Iso_dh PF00180.20 ORF45177 - 3.1e-139 464.0 0.0 3.5e-139 463.8 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase CAP PF00188.26 ORF44678 - 3.3e-09 37.6 0.1 8.9e-09 36.3 0.0 1.8 2 0 0 2 2 2 1 Cysteine-rich secretory protein family UBN_AB PF14075.6 ORF43871 - 0.022 14.5 2.6 0.043 13.5 2.6 1.4 1 0 0 1 1 1 0 Ubinuclein conserved middle domain ApoLp-III PF07464.11 ORF43871 - 0.059 13.5 3.9 2.1 8.4 0.4 2.3 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) EamA PF00892.20 ORF40467 - 2.8e-19 69.6 31.2 3e-14 53.4 13.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family Spike_rec_bind PF09408.10 ORF40467 - 0.044 13.5 0.3 0.07 12.8 0.3 1.3 1 0 0 1 1 1 0 Spike receptor binding domain DUF423 PF04241.15 ORF40467 - 0.64 10.3 12.4 3.5 7.9 0.2 3.9 2 2 2 4 4 4 0 Protein of unknown function (DUF423) Adeno_E3_14_5 PF04834.12 ORF40467 - 9.7 6.8 7.8 33 5.1 0.1 3.5 2 1 1 3 3 3 0 Early E3 14.5 kDa protein Zip PF02535.22 ORF33033 - 1.2e-46 159.5 0.5 1.7e-46 159.0 0.5 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter S-antigen PF05756.11 ORF33033 - 0.02 15.3 0.4 0.083 13.3 0.0 2.1 2 0 0 2 2 2 0 S-antigen protein MerC PF03203.14 ORF33033 - 0.088 13.3 6.1 3.9 8.0 1.3 3.3 2 2 0 2 2 2 0 MerC mercury resistance protein DUF4231 PF14015.6 ORF33033 - 4.6 7.8 4.7 25 5.4 0.1 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF4231) ADH_zinc_N PF00107.26 ORF32640 - 3e-12 46.6 0.0 7e-12 45.5 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF32640 - 4.6e-07 29.7 0.0 3.5e-06 26.9 0.0 2.1 1 1 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 ORF32640 - 0.0024 18.9 0.0 0.0091 17.0 0.0 2.0 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_N_2 PF16884.5 ORF32640 - 0.1 12.5 0.0 0.22 11.4 0.0 1.6 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase RmlD_sub_bind PF04321.17 ORF32640 - 0.15 11.2 0.0 0.24 10.5 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Zn_Tnp_IS91 PF14319.6 ORF22486 - 0.0036 17.3 1.0 0.0063 16.5 1.0 1.3 1 0 0 1 1 1 1 Transposase zinc-binding domain RCC1 PF00415.18 ORF151427 - 4.7e-52 174.4 6.8 5e-09 36.7 0.0 7.2 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF151427 - 3.4e-23 80.9 31.4 7.4e-09 35.2 0.4 6.3 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat Peptidase_C25_C PF03785.14 ORF151427 - 0.0091 15.8 0.1 4 7.3 0.1 2.5 2 0 0 2 2 2 2 Peptidase family C25, C terminal ig-like domain PapC_C PF13953.6 ORF151427 - 0.11 12.3 0.0 6.7 6.6 0.0 3.2 3 0 0 3 3 3 0 PapC C-terminal domain ZZ PF00569.17 ORF14319 - 0.00032 20.5 1.0 0.00065 19.5 1.0 1.5 1 0 0 1 1 1 1 Zinc finger, ZZ type N_BRCA1_IG PF16158.5 ORF14319 - 0.0011 19.7 0.3 0.0043 17.8 0.0 2.1 2 1 0 2 2 2 1 Ig-like domain from next to BRCA1 gene Peptidase_S66 PF02016.15 ORF14319 - 0.17 12.0 1.0 0.44 10.7 0.0 2.2 3 0 0 3 3 3 0 LD-carboxypeptidase N-terminal domain NPBW PF15180.6 ORF14319 - 0.45 10.4 4.6 0.52 10.2 2.4 2.1 2 1 0 2 2 2 0 Neuropeptides B and W SAGA-Tad1 PF12767.7 ORF14319 - 1.1 8.9 12.8 1.9 8.2 12.8 1.4 1 0 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit Glyco_hydro_61 PF03443.14 ORF141976 - 5.1e-09 36.4 0.0 8.5e-09 35.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolase family 61 LPMO_10 PF03067.15 ORF141976 - 2.4e-08 34.9 0.1 4.3e-08 34.0 0.1 1.4 1 0 0 1 1 1 1 Lytic polysaccharide mono-oxygenase, cellulose-degrading Gliadin PF13016.6 ORF129000 - 0.26 11.7 5.5 0.2 12.1 2.6 2.2 2 0 0 2 2 2 0 Cys-rich Gliadin N-terminal zf-RING_2 PF13639.6 ORF126938 - 1.3e-10 41.4 11.0 1.3e-10 41.4 11.0 3.4 3 1 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF126938 - 1e-05 25.1 10.5 1e-05 25.1 10.5 2.7 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF126938 - 0.0032 17.7 12.1 0.022 15.0 12.1 2.4 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF126938 - 0.026 14.4 9.8 0.026 14.4 9.8 2.6 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) UAA PF08449.11 ORF121694 - 7.2e-55 186.3 19.7 8.7e-55 186.0 19.7 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF121694 - 0.0011 19.2 25.2 0.11 12.7 9.4 2.2 2 0 0 2 2 2 2 EamA-like transporter family Pex24p PF06398.11 ORF121694 - 0.0071 15.4 0.1 0.013 14.6 0.1 1.3 1 0 0 1 1 1 1 Integral peroxisomal membrane peroxin zf-RING_2 PF13639.6 ORF100513 - 1.3e-10 41.4 11.0 1.3e-10 41.4 11.0 3.4 3 1 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF100513 - 1e-05 25.1 10.5 1e-05 25.1 10.5 2.7 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF100513 - 0.0032 17.7 12.1 0.022 15.0 12.1 2.4 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF100513 - 0.026 14.4 9.8 0.026 14.4 9.8 2.6 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) RabGAP-TBC PF00566.18 ORF99223 - 1.6e-32 112.9 3.3 1.6e-32 112.9 3.3 2.1 2 0 0 2 2 2 1 Rab-GTPase-TBC domain Phage_holin_3_6 PF07332.11 ORF95286 - 0.1 12.6 0.1 0.1 12.6 0.1 2.2 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III AIF_C PF14721.6 ORF89065 - 0.0031 17.8 0.0 3.9 7.8 0.0 2.3 2 0 0 2 2 2 2 Apoptosis-inducing factor, mitochondrion-associated, C-term DUF4658 PF15555.6 ORF89065 - 0.0044 17.1 0.0 4.4 7.4 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF4658) GBP_PSP PF02425.15 ORF89065 - 0.026 14.2 4.5 2.6 7.8 0.4 2.4 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Myelin_PLP PF01275.19 ORF89065 - 0.032 14.1 0.8 8.2 6.2 0.1 2.2 2 0 0 2 2 2 0 Myelin proteolipid protein (PLP or lipophilin) TMEM215 PF15746.5 ORF89065 - 0.065 12.7 0.1 9.4 5.6 0.0 2.2 2 0 0 2 2 2 0 TMEM215 family Mntp PF02659.15 ORF89065 - 0.075 12.8 3.1 6.3 6.5 0.2 2.2 2 0 0 2 2 2 0 Putative manganese efflux pump Fer2_2 PF01799.20 ORF89065 - 0.097 12.7 1.1 17 5.5 0.1 2.4 2 0 0 2 2 2 0 [2Fe-2S] binding domain zf-C4 PF00105.18 ORF89065 - 3.3 8.2 5.6 31 5.1 0.1 2.9 4 0 0 4 4 4 0 Zinc finger, C4 type (two domains) Kelch_6 PF13964.6 ORF88278 - 1.8e-13 50.2 3.0 0.018 15.3 0.0 5.7 4 1 2 6 6 6 4 Kelch motif Kelch_4 PF13418.6 ORF88278 - 4.4e-10 39.4 0.5 7e-05 22.8 0.0 5.4 5 0 0 5 5 5 1 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF88278 - 7e-10 38.3 1.5 0.25 10.9 0.3 4.8 5 0 0 5 5 5 4 Kelch motif Kelch_3 PF13415.6 ORF88278 - 4.3e-06 26.9 0.0 4.4 7.7 0.0 4.4 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF88278 - 0.00011 22.1 3.5 0.7 10.0 0.0 4.9 5 0 0 5 5 5 1 Kelch motif Kelch_5 PF13854.6 ORF88278 - 0.00063 19.7 5.1 0.29 11.2 0.5 4.2 4 0 0 4 4 4 1 Kelch motif DHHC PF01529.20 ORF85416 - 7.4e-24 84.4 20.8 7.4e-24 84.4 20.8 2.5 2 1 0 2 2 2 1 DHHC palmitoyltransferase DUF35_N PF12172.8 ORF85416 - 0.0034 17.2 1.1 0.0071 16.2 1.1 1.5 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) CAF1A PF12253.8 ORF85416 - 0.028 14.6 4.4 0.052 13.7 4.4 1.4 1 0 0 1 1 1 0 Chromatin assembly factor 1 subunit A Pkinase PF00069.25 ORF85134 - 1e-52 179.1 0.0 1.3e-52 178.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85134 - 2.3e-27 95.9 0.0 3.3e-27 95.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF85134 - 1.4e-06 27.4 0.0 2.1e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF85134 - 5.3e-05 23.3 0.5 0.0082 16.1 0.0 2.6 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF85134 - 0.00015 21.2 0.0 0.0003 20.2 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF85134 - 0.0031 16.9 0.0 0.0057 16.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF85134 - 0.0064 16.1 0.0 0.013 15.1 0.0 1.6 2 0 0 2 2 2 1 RIO1 family Haspin_kinase PF12330.8 ORF85134 - 0.035 13.1 0.0 0.053 12.5 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain DnaJ_C PF01556.18 ORF82375 - 1.1e-30 106.7 0.4 1.4e-30 106.3 0.4 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 ORF82375 - 2.3e-25 88.5 3.3 4.3e-25 87.6 3.3 1.5 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 ORF82375 - 2e-15 56.9 14.4 3.3e-15 56.2 14.4 1.3 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 ORF82375 - 5.1e-07 29.5 7.5 0.00058 19.8 2.3 2.4 2 0 0 2 2 2 2 Tryptophan RNA-binding attenuator protein inhibitory protein HypA PF01155.19 ORF82375 - 0.013 15.5 5.2 0.3 11.1 0.3 2.3 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SpoIISA_toxin PF14171.6 ORF82375 - 0.18 11.5 1.9 3.1 7.4 0.0 2.1 2 0 0 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system Lar_restr_allev PF14354.6 ORF82375 - 2.7 8.5 11.0 5.7 7.4 6.2 3.0 2 1 0 2 2 2 0 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.7 ORF82375 - 6.4 6.8 10.5 15 5.7 3.4 2.5 1 1 1 2 2 2 0 Transposase zinc-ribbon domain SH3_3 PF08239.11 ORF79831 - 5.1e-09 36.3 1.7 0.00035 20.8 0.2 2.8 3 0 0 3 3 3 2 Bacterial SH3 domain Ank_4 PF13637.6 ORF79831 - 1.5e-05 25.4 0.0 0.004 17.7 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF79831 - 8.6e-05 23.1 0.0 0.00044 20.8 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF79831 - 0.007 16.7 0.1 0.49 10.8 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF79831 - 0.082 13.5 0.3 1.3 9.9 0.0 3.0 3 0 0 3 3 3 0 Ankyrin repeat DUF1204 PF06721.11 ORF79831 - 0.094 12.1 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1204) SH3_4 PF06347.13 ORF79831 - 0.12 12.3 3.5 0.19 11.6 0.5 2.8 2 0 0 2 2 2 0 Bacterial SH3 domain Exostosin PF03016.15 ORF76938 - 1e-19 70.9 0.1 1.4e-19 70.4 0.1 1.2 1 0 0 1 1 1 1 Exostosin family ABC_tran PF00005.27 ORF75546 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF75546 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF75546 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF75546 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF75546 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF75546 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF75546 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF75546 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF75546 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF75546 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF75546 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF75546 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF75546 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF75546 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF75546 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF75546 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF75546 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF75546 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF75546 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF75546 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF75546 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF75546 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF75546 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region GMC_oxred_C PF05199.13 ORF73568 - 1.7e-42 145.3 0.0 2.5e-42 144.8 0.0 1.3 1 0 0 1 1 1 1 GMC oxidoreductase GMC_oxred_N PF00732.19 ORF73568 - 2.9e-27 95.8 0.0 7e-27 94.6 0.0 1.6 2 0 0 2 2 2 1 GMC oxidoreductase SH3_3 PF08239.11 ORF66199 - 5.1e-09 36.3 1.7 0.00035 20.8 0.2 2.8 3 0 0 3 3 3 2 Bacterial SH3 domain Ank_4 PF13637.6 ORF66199 - 1.5e-05 25.4 0.0 0.004 17.7 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF66199 - 8.6e-05 23.1 0.0 0.00044 20.8 0.0 2.0 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF66199 - 0.007 16.7 0.1 0.49 10.8 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF66199 - 0.082 13.5 0.3 1.3 9.9 0.0 3.0 3 0 0 3 3 3 0 Ankyrin repeat DUF1204 PF06721.11 ORF66199 - 0.094 12.1 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1204) SH3_4 PF06347.13 ORF66199 - 0.12 12.3 3.5 0.19 11.6 0.5 2.8 2 0 0 2 2 2 0 Bacterial SH3 domain ABC_tran PF00005.27 ORF66162 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF66162 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF66162 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF66162 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF66162 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF66162 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF66162 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF66162 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF66162 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF66162 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF66162 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF66162 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF66162 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF66162 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF66162 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF66162 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF66162 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF66162 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF66162 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF66162 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF66162 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF66162 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF66162 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region DUF4682 PF15733.5 ORF65094 - 0.28 11.8 3.7 2.7 8.6 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4682) 5-FTHF_cyc-lig PF01812.20 ORF61571 - 1.5e-27 96.7 0.0 2.3e-27 96.1 0.0 1.3 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Exostosin PF03016.15 ORF61025 - 1.9e-18 66.8 0.0 2.6e-18 66.3 0.0 1.2 1 0 0 1 1 1 1 Exostosin family Flu_B_M2 PF04772.12 ORF60084 - 0.0027 17.9 2.4 0.0072 16.5 2.4 1.8 1 0 0 1 1 1 1 Influenza B matrix protein 2 (BM2) Nuc_N PF14448.6 ORF60084 - 0.06 13.2 0.3 0.14 12.0 0.3 1.6 1 0 0 1 1 1 0 Nuclease N terminal ABC_tran PF00005.27 ORF57255 - 4.5e-33 114.7 0.0 7e-33 114.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF57255 - 6.6e-09 35.5 1.1 1.2e-06 28.1 1.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF57255 - 2.9e-05 24.4 0.0 0.0029 17.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF57255 - 9.1e-05 22.3 0.2 0.00018 21.3 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF57255 - 0.00023 21.6 0.3 0.00095 19.6 0.3 2.1 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF57255 - 0.00026 20.3 0.0 0.00041 19.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF57255 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF57255 - 0.0021 18.2 0.0 0.0081 16.3 0.0 1.9 2 1 0 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF57255 - 0.0029 16.8 0.0 0.0033 16.6 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF57255 - 0.004 17.4 2.0 0.081 13.2 0.7 3.1 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF57255 - 0.0044 17.6 0.4 0.02 15.5 0.2 2.2 2 1 0 2 2 1 1 AAA domain AAA_5 PF07728.14 ORF57255 - 0.018 15.1 0.0 0.15 12.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.18 ORF57255 - 0.025 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_21 PF13304.6 ORF57255 - 0.026 14.3 0.3 0.16 11.7 0.0 2.4 2 1 1 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system IstB_IS21 PF01695.17 ORF57255 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF57255 - 0.037 13.5 0.0 0.07 12.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Rad17 PF03215.15 ORF57255 - 0.039 13.9 0.0 0.3 11.0 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain Pox_A32 PF04665.12 ORF57255 - 0.04 13.4 0.0 0.54 9.7 0.0 2.1 2 0 0 2 2 2 0 Poxvirus A32 protein RsgA_GTPase PF03193.16 ORF57255 - 0.055 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF57255 - 0.064 13.0 0.0 0.17 11.6 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF57255 - 0.082 12.6 0.0 1.6 8.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 ORF57255 - 0.099 13.1 0.7 0.61 10.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain AAA PF00004.29 ORF57255 - 0.1 13.0 0.0 13 6.2 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 ORF57255 - 0.17 12.3 0.0 0.69 10.3 0.0 2.0 2 0 0 2 2 2 0 RNA helicase ABC_membrane PF00664.23 ORF57255 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region 3Beta_HSD PF01073.19 ORF57168 - 1.9e-22 79.6 0.0 2.4e-22 79.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 ORF57168 - 8.8e-10 38.2 0.0 1.4e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein Epimerase PF01370.21 ORF57168 - 1.7e-08 34.2 0.0 2.8e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family SIC PF03482.13 ORF55958 - 0.083 13.1 0.1 0.19 12.0 0.1 1.6 1 0 0 1 1 1 0 sic protein repeat Cdh1_DBD_1 PF18196.1 ORF50355 - 3.1 8.1 7.5 0.21 11.9 0.3 2.7 3 1 0 3 3 3 0 Chromodomain helicase DNA-binding domain 1 DnaJ_C PF01556.18 ORF47817 - 1.8e-30 106.0 0.4 2.4e-30 105.6 0.4 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 ORF47817 - 2.3e-25 88.5 3.3 4.3e-25 87.6 3.3 1.5 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 ORF47817 - 2e-15 56.9 14.4 3.3e-15 56.2 14.4 1.3 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 ORF47817 - 5.1e-07 29.6 7.5 0.00058 19.8 2.3 2.4 2 0 0 2 2 2 2 Tryptophan RNA-binding attenuator protein inhibitory protein HypA PF01155.19 ORF47817 - 0.013 15.5 5.2 0.3 11.1 0.3 2.3 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SpoIISA_toxin PF14171.6 ORF47817 - 0.24 11.0 2.1 3.8 7.1 0.0 2.1 2 0 0 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system Lar_restr_allev PF14354.6 ORF47817 - 2.7 8.5 11.0 5.7 7.4 6.2 3.0 2 1 0 2 2 2 0 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.7 ORF47817 - 6.4 6.8 10.5 15 5.7 3.4 2.5 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Abhydrolase_1 PF00561.20 ORF46182 - 7.1e-29 101.2 0.2 1.2e-23 84.1 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF46182 - 3.4e-17 62.5 0.2 1.6e-16 60.3 0.2 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF46182 - 4.6e-14 53.5 0.0 1.2e-13 52.2 0.0 1.6 1 1 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 ORF46182 - 9e-07 28.8 0.4 5.3e-06 26.3 0.4 2.0 1 1 0 1 1 1 1 Putative esterase LIDHydrolase PF10230.9 ORF46182 - 4e-06 26.6 1.3 2e-05 24.3 1.3 1.9 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase DUF915 PF06028.11 ORF46182 - 2.9e-05 23.5 0.1 0.0043 16.4 0.0 2.5 3 0 0 3 3 3 1 Alpha/beta hydrolase of unknown function (DUF915) Thioesterase PF00975.20 ORF46182 - 0.00045 20.4 0.0 0.0019 18.3 0.0 2.0 2 0 0 2 2 2 1 Thioesterase domain Abhydrolase_5 PF12695.7 ORF46182 - 0.0014 18.4 0.0 0.013 15.3 0.0 2.2 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 ORF46182 - 0.0038 17.0 0.5 0.42 10.4 0.1 2.5 2 1 0 2 2 2 1 Phospholipase/Carboxylesterase Ndr PF03096.14 ORF46182 - 0.0066 15.2 0.0 0.014 14.1 0.0 1.5 1 0 0 1 1 1 1 Ndr family Ser_hydrolase PF06821.13 ORF46182 - 0.12 12.3 0.0 0.55 10.1 0.0 1.9 2 0 0 2 2 2 0 Serine hydrolase CheW PF01584.19 ORF36377 - 9.4e-28 96.6 1.0 1.5e-27 95.9 1.0 1.3 1 0 0 1 1 1 1 CheW-like domain HATPase_c PF02518.26 ORF36377 - 4e-18 66.0 0.2 6.7e-18 65.2 0.2 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WD40 PF00400.32 ORF33801 - 5.2e-13 49.2 14.6 0.0043 17.9 0.8 5.1 5 0 0 5 5 5 4 WD domain, G-beta repeat Nup160 PF11715.8 ORF33801 - 0.0046 15.7 1.0 0.18 10.4 0.0 2.8 2 1 1 3 3 3 2 Nucleoporin Nup120/160 ANAPC4_WD40 PF12894.7 ORF33801 - 0.0087 16.3 0.3 1.9 8.9 0.1 3.3 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain CLN3 PF02487.17 ORF32756 - 2e-52 178.6 8.9 2.4e-52 178.4 8.9 1.0 1 0 0 1 1 1 1 CLN3 protein FlhD PF05247.13 ORF32756 - 0.18 12.1 0.1 0.32 11.3 0.1 1.4 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) NTP_transferase PF00483.23 ORF32632 - 4.3e-47 160.8 0.0 5.4e-47 160.5 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 ORF32632 - 1.2e-10 40.6 1.1 1.7e-05 24.4 0.4 2.8 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 ORF32632 - 9.9e-07 29.3 0.0 1.4e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 ORF32632 - 0.00055 19.0 0.2 0.008 15.2 0.1 2.4 2 1 0 2 2 2 1 L-fucokinase DUF4954 PF16314.5 ORF32632 - 0.048 11.8 0.3 0.11 10.7 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Hexapep_2 PF14602.6 ORF32632 - 0.17 11.6 4.2 0.46 10.3 0.8 2.8 1 1 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 ORF32632 - 0.19 11.4 0.0 0.34 10.6 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TauE PF01925.19 ORF2409 - 1.6e-08 34.5 3.7 1.6e-08 34.5 3.7 2.2 3 0 0 3 3 3 1 Sulfite exporter TauE/SafE Gaa1 PF04114.14 ORF2409 - 0.00051 19.2 0.2 0.0011 18.1 0.1 1.4 1 1 0 1 1 1 1 Gaa1-like, GPI transamidase component DUF3675 PF12428.8 ORF2409 - 0.16 12.6 1.8 0.57 10.7 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3675) DUF2207 PF09972.9 ORF2409 - 2.3 6.9 7.4 17 4.0 7.4 2.1 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Spo7 PF03907.13 ORF2409 - 6.7 6.1 5.9 1.2 8.5 1.2 2.1 3 0 0 3 3 3 0 Spo7-like protein Pkinase PF00069.25 ORF22700 - 6.9e-10 38.7 3.0 5.9e-09 35.7 2.4 2.3 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22700 - 3.7e-06 26.4 1.0 3.7e-06 26.4 1.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase SpoVIF PF14069.6 ORF22700 - 0.011 15.6 0.5 0.62 9.9 0.0 2.7 2 0 0 2 2 2 0 Stage VI sporulation protein F Kinase-like PF14531.6 ORF22700 - 0.059 12.7 0.0 0.12 11.6 0.0 1.5 1 0 0 1 1 1 0 Kinase-like Methyltransf_23 PF13489.6 ORF2262 - 0.025 14.4 0.0 0.05 13.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 ORF2262 - 0.038 13.7 0.0 0.058 13.1 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_25 PF13649.6 ORF2262 - 0.044 14.5 0.0 0.11 13.2 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_23 PF13489.6 ORF18514 - 0.025 14.4 0.0 0.05 13.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 ORF18514 - 0.038 13.7 0.0 0.058 13.1 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_25 PF13649.6 ORF18514 - 0.044 14.5 0.0 0.11 13.2 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_21 PF05050.12 ORF18220 - 5e-06 26.6 0.0 6.9e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase FkbM domain ABC_tran PF00005.27 ORF152028 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF152028 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF152028 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF152028 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF152028 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF152028 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF152028 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF152028 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF152028 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF152028 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF152028 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF152028 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF152028 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF152028 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF152028 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF152028 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF152028 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF152028 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF152028 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF152028 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF152028 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF152028 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF152028 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region DUF1682 PF07946.14 ORF151047 - 2.8e-63 214.1 4.3 3.4e-63 213.8 4.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1682) FAM176 PF14851.6 ORF151047 - 0.03 14.0 6.8 0.055 13.1 6.8 1.4 1 0 0 1 1 1 0 FAM176 family AbiH PF14253.6 ORF151047 - 0.26 11.1 8.2 0.45 10.3 8.2 1.2 1 0 0 1 1 1 0 Bacteriophage abortive infection AbiH Rab15_effector PF15208.6 ORF151047 - 1.1 8.5 0.0 1.1 8.5 0.0 2.7 3 0 0 3 3 3 0 Rab15 effector TERB2 PF15101.6 ORF151047 - 2.1 8.4 7.3 3.3 7.7 7.3 1.2 1 0 0 1 1 1 0 Telomere-associated protein TERB2 CENP-B_dimeris PF09026.10 ORF151047 - 3.1 8.2 5.2 25 5.4 0.5 2.5 2 1 0 2 2 2 0 Centromere protein B dimerisation domain NTP_transferase PF00483.23 ORF146064 - 2e-47 161.9 0.0 2.5e-47 161.5 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 ORF146064 - 1.2e-10 40.6 1.1 1.7e-05 24.4 0.4 2.8 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 ORF146064 - 9.8e-07 29.3 0.0 1.4e-06 28.8 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 ORF146064 - 0.00052 19.1 0.3 0.0064 15.5 0.1 2.4 2 1 0 2 2 2 1 L-fucokinase DUF4954 PF16314.5 ORF146064 - 0.045 11.9 0.3 0.1 10.7 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Hexapep_2 PF14602.6 ORF146064 - 0.18 11.6 4.2 0.46 10.3 0.8 2.8 1 1 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 ORF146064 - 0.19 11.4 0.0 0.34 10.6 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Apolipoprotein PF01442.18 ORF136631 - 6.5e-05 22.9 6.2 6.5e-05 22.9 6.2 2.4 2 0 0 2 2 2 1 Apolipoprotein A1/A4/E domain EzrA PF06160.12 ORF136631 - 0.00073 17.8 27.3 0.11 10.7 27.8 2.5 1 1 0 1 1 1 1 Septation ring formation regulator, EzrA Flagellin_N PF00669.20 ORF136631 - 0.0019 18.3 2.6 1.5 8.9 0.0 2.9 2 1 1 3 3 3 2 Bacterial flagellin N-terminal helical region FliD_C PF07195.12 ORF136631 - 0.0027 17.2 5.7 0.0027 17.2 5.7 2.4 2 0 0 2 2 2 1 Flagellar hook-associated protein 2 C-terminus GAS PF13851.6 ORF136631 - 0.0046 16.3 3.1 0.0046 16.3 3.1 3.1 1 1 0 2 2 1 1 Growth-arrest specific micro-tubule binding Med9 PF07544.13 ORF136631 - 0.0049 16.9 14.7 0.25 11.4 1.6 4.0 2 1 2 4 4 4 2 RNA polymerase II transcription mediator complex subunit 9 Com_YlbF PF06133.11 ORF136631 - 0.0059 17.2 3.7 0.0059 17.2 3.7 3.9 2 1 1 3 3 1 1 Control of competence regulator ComK, YlbF/YmcA Baculo_p24 PF05073.12 ORF136631 - 0.014 15.2 5.7 0.014 15.2 5.7 2.5 1 1 1 2 2 2 0 Baculovirus P24 capsid protein DUF1664 PF07889.12 ORF136631 - 0.019 15.0 20.0 0.03 14.3 9.5 3.4 2 1 2 4 4 3 0 Protein of unknown function (DUF1664) DUF2703 PF10865.8 ORF136631 - 0.036 14.2 1.0 0.036 14.2 1.0 2.8 2 2 1 3 3 3 0 Domain of unknown function (DUF2703) DUF4349 PF14257.6 ORF136631 - 0.053 13.0 10.8 0.22 10.9 0.2 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4349) Snapin_Pallidin PF14712.6 ORF136631 - 0.082 13.3 0.4 0.082 13.3 0.4 4.0 2 1 2 4 4 4 0 Snapin/Pallidin Baculo_PEP_C PF04513.12 ORF136631 - 0.093 12.8 5.4 11 6.0 0.0 3.3 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4407 PF14362.6 ORF136631 - 0.093 12.1 16.6 0.016 14.6 6.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Fic_N PF13784.6 ORF136631 - 0.096 12.7 1.3 2.4 8.3 0.7 2.6 2 0 0 2 2 2 0 Fic/DOC family N-terminal YtxH PF12732.7 ORF136631 - 0.098 13.2 18.3 1.5 9.4 7.2 4.1 1 1 1 2 2 2 0 YtxH-like protein Mod_r PF07200.13 ORF136631 - 0.11 12.6 24.3 0.89 9.7 10.9 3.4 1 1 3 4 4 4 0 Modifier of rudimentary (Mod(r)) protein Exonuc_VII_L PF02601.15 ORF136631 - 0.14 11.7 17.7 15 5.0 17.9 2.1 1 1 0 1 1 1 0 Exonuclease VII, large subunit HsbA PF12296.8 ORF136631 - 0.15 12.5 2.7 5.7 7.4 0.1 2.6 2 1 0 2 2 2 0 Hydrophobic surface binding protein A ApoLp-III PF07464.11 ORF136631 - 0.17 12.0 22.5 0.65 10.1 3.0 3.7 1 1 3 4 4 4 0 Apolipophorin-III precursor (apoLp-III) CREPT PF16566.5 ORF136631 - 0.18 12.0 20.5 0.1 12.8 5.3 3.2 1 1 2 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour TMPIT PF07851.13 ORF136631 - 0.18 11.0 24.0 1.5 8.0 12.0 2.7 1 1 1 2 2 2 0 TMPIT-like protein CENP-H PF05837.12 ORF136631 - 0.32 11.4 19.0 0.24 11.8 1.8 3.3 2 1 1 3 3 3 0 Centromere protein H (CENP-H) Spc7 PF08317.11 ORF136631 - 0.41 9.5 30.4 0.019 13.9 15.0 2.6 1 1 1 2 2 2 0 Spc7 kinetochore protein YkyA PF10368.9 ORF136631 - 0.45 10.2 32.8 1.7 8.3 14.2 2.5 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein DUF3135 PF11333.8 ORF136631 - 0.52 10.6 7.6 0.13 12.5 1.2 3.0 3 1 1 4 4 2 0 Protein of unknown function (DUF3135) Elf4 PF07011.11 ORF136631 - 0.54 10.2 4.7 14 5.7 0.9 2.9 2 1 1 3 3 2 0 Early Flowering 4 domain DUF3584 PF12128.8 ORF136631 - 0.59 7.6 24.8 1.7 6.0 24.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) NPV_P10 PF05531.12 ORF136631 - 0.61 10.6 12.1 34 5.0 0.1 4.5 1 1 2 4 4 4 0 Nucleopolyhedrovirus P10 protein OmpH PF03938.14 ORF136631 - 0.62 10.4 32.6 0.31 11.4 5.0 3.3 1 1 2 3 3 3 0 Outer membrane protein (OmpH-like) FAM184 PF15665.5 ORF136631 - 0.65 9.7 29.2 1 9.1 28.5 1.8 1 1 1 2 2 2 0 Family with sequence similarity 184, A and B TPR_MLP1_2 PF07926.12 ORF136631 - 0.7 10.0 28.4 1 9.5 0.5 3.8 1 1 3 4 4 3 0 TPR/MLP1/MLP2-like protein WXG100 PF06013.12 ORF136631 - 0.84 9.9 11.1 7.7 6.8 0.2 3.8 2 1 0 3 3 3 0 Proteins of 100 residues with WXG AAA_13 PF13166.6 ORF136631 - 0.93 8.1 26.7 0.31 9.6 15.6 2.3 1 1 1 2 2 2 0 AAA domain MCPsignal PF00015.21 ORF136631 - 1.4 8.7 7.4 2.3 8.0 0.3 2.7 2 1 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Laminin_II PF06009.12 ORF136631 - 1.4 8.9 18.8 0.22 11.5 0.4 3.5 1 1 3 4 4 4 0 Laminin Domain II Cob_adeno_trans PF01923.18 ORF136631 - 1.5 8.9 10.1 0.64 10.1 5.0 2.4 1 1 0 2 2 2 0 Cobalamin adenosyltransferase Vps51 PF08700.11 ORF136631 - 1.5 8.9 14.6 8.5 6.5 3.7 4.2 2 2 0 3 3 3 0 Vps51/Vps67 BST2 PF16716.5 ORF136631 - 1.8 9.2 22.3 3.4 8.3 3.0 4.4 3 1 1 4 4 4 0 Bone marrow stromal antigen 2 Fib_alpha PF08702.10 ORF136631 - 1.9 8.7 22.5 0.28 11.4 7.6 3.3 1 1 2 4 4 4 0 Fibrinogen alpha/beta chain family DUF2203 PF09969.9 ORF136631 - 2.7 8.7 16.4 11 6.8 5.1 3.7 1 1 1 2 2 1 0 Uncharacterized conserved protein (DUF2203) SlyX PF04102.12 ORF136631 - 2.9 8.6 16.2 4.9 7.8 0.3 4.8 3 2 1 4 4 3 0 SlyX DUF148 PF02520.17 ORF136631 - 3.6 7.7 22.2 0.067 13.3 8.4 2.9 1 1 2 3 3 3 0 Domain of unknown function DUF148 DUF573 PF04504.14 ORF136631 - 3.9 8.2 14.6 2.7 8.7 4.3 3.3 1 1 2 3 3 3 0 Protein of unknown function, DUF573 SHE3 PF17078.5 ORF136631 - 4.1 7.1 24.7 1.4 8.6 13.4 3.2 1 1 0 3 3 3 0 SWI5-dependent HO expression protein 3 HMMR_N PF15905.5 ORF136631 - 4.2 6.8 33.2 1.9 7.8 21.5 2.6 1 1 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal CorA PF01544.18 ORF136631 - 8 5.7 10.5 1.2 8.4 5.3 2.0 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF4164 PF13747.6 ORF136631 - 9.3 6.6 11.4 3.1 8.1 0.1 3.5 1 1 3 4 4 4 0 Domain of unknown function (DUF4164) Myb_DNA-bind_3 PF12776.7 ORF136631 - 9.4 7.3 11.3 25 6.0 3.4 4.0 2 1 1 4 4 4 0 Myb/SANT-like DNA-binding domain MTS PF05175.14 ORF127599 - 0.14 11.7 0.0 0.3 10.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_4 PF02390.17 ORF127599 - 0.2 11.1 0.0 0.32 10.4 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase ABC_tran PF00005.27 ORF127471 - 2.2e-32 112.4 0.0 3.4e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF127471 - 5.7e-09 35.7 0.9 1e-06 28.4 0.9 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF127471 - 2.7e-05 24.5 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF127471 - 0.00011 22.1 0.2 0.0002 21.2 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF127471 - 0.00031 21.2 0.3 0.00097 19.6 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF127471 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF127471 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF127471 - 0.0027 17.8 0.4 0.0078 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF127471 - 0.0036 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF127471 - 0.0043 17.2 2.0 0.081 13.2 0.7 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF127471 - 0.014 15.9 0.3 0.042 14.4 0.1 1.9 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF127471 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF127471 - 0.022 14.7 0.0 0.16 11.9 0.0 2.1 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF127471 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF127471 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF127471 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF127471 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF127471 - 0.053 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 ORF127471 - 0.07 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 ORF127471 - 0.12 12.8 0.0 17 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF127471 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region ABC_tran PF00005.27 ORF117467 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF117467 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF117467 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF117467 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF117467 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF117467 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF117467 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF117467 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF117467 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF117467 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF117467 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF117467 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF117467 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF117467 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF117467 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF117467 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF117467 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF117467 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF117467 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF117467 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF117467 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF117467 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF117467 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region ETF_alpha PF00766.19 ORF116970 - 5e-30 103.4 0.1 1.2e-29 102.2 0.1 1.7 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 ORF116970 - 3.6e-14 53.1 0.5 6.9e-14 52.1 0.5 1.5 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ABC_tran PF00005.27 ORF114255 - 2.1e-32 112.5 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF114255 - 5.1e-09 35.9 0.8 8.3e-07 28.7 0.8 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF114255 - 2.7e-05 24.4 0.0 0.0026 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF114255 - 0.00011 22.0 0.2 0.00022 21.1 0.2 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF114255 - 0.00031 21.2 0.3 0.001 19.5 0.3 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.13 ORF114255 - 0.00037 19.7 0.0 0.00058 19.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 ORF114255 - 0.00038 20.1 0.0 0.00077 19.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF114255 - 0.0025 18.0 0.3 0.0077 16.3 0.1 1.9 1 1 1 2 2 2 1 Helicase HerA, central domain G-alpha PF00503.20 ORF114255 - 0.0037 16.5 0.0 0.0042 16.3 0.0 1.2 1 0 0 1 1 1 1 G-protein alpha subunit SbcCD_C PF13558.6 ORF114255 - 0.0048 17.1 2.3 0.084 13.1 0.8 3.0 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 ORF114255 - 0.015 15.8 0.3 0.047 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF114255 - 0.017 15.1 0.0 0.14 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 ORF114255 - 0.022 14.7 0.0 0.16 11.9 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_21 PF13304.6 ORF114255 - 0.023 14.5 0.0 0.18 11.6 0.0 2.4 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 ORF114255 - 0.024 14.0 0.0 0.047 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 ORF114255 - 0.03 14.0 0.2 6.6 6.4 0.1 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_7 PF12775.7 ORF114255 - 0.034 13.7 0.0 0.068 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF114255 - 0.052 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Cytidylate_kin PF02224.18 ORF114255 - 0.055 13.2 0.0 0.14 11.8 0.0 1.7 1 1 0 1 1 1 0 Cytidylate kinase AAA_30 PF13604.6 ORF114255 - 0.075 12.8 0.0 1.5 8.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Pox_A32 PF04665.12 ORF114255 - 0.078 12.4 0.2 0.52 9.7 0.1 2.0 1 1 0 2 2 2 0 Poxvirus A32 protein AAA PF00004.29 ORF114255 - 0.12 12.8 0.0 16 5.9 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_membrane PF00664.23 ORF114255 - 0.41 10.2 4.4 0.57 9.8 4.4 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region DUF1376 PF07120.11 ORF110171 - 0.06 13.7 0.0 1.5 9.2 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1376) DPBB_1 PF03330.18 ORF106219 - 2e-20 72.9 0.0 4.8e-20 71.6 0.0 1.6 1 0 0 1 1 1 1 Lytic transglycolase SPOR PF05036.13 ORF106219 - 6.8e-17 61.6 2.2 1.7e-16 60.4 2.2 1.7 1 0 0 1 1 1 1 Sporulation related domain Med13_C PF06333.12 ORF104383 - 7.2 5.8 11.9 11 5.2 11.9 1.3 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain GGDEF PF00990.21 NODE_16684_length_1086_cov_2.303520_g12685_i0reverse_frame_3 - 3.9e-42 143.7 0.0 7.8e-42 142.8 0.0 1.5 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain GGDEF_2 PF17853.1 NODE_16684_length_1086_cov_2.303520_g12685_i0reverse_frame_3 - 0.00092 19.5 0.0 0.0066 16.7 0.0 2.1 2 0 0 2 2 2 1 GGDEF-like domain DUF1804 PF08822.11 NODE_16684_length_1086_cov_2.303520_g12685_i0reverse_frame_3 - 0.025 14.6 0.0 0.09 12.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1804) Epimerase PF01370.21 ORF94728 - 2.5e-21 76.2 0.0 5.2e-21 75.2 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF94728 - 5.9e-21 74.7 0.0 7.9e-21 74.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF94728 - 2e-15 57.0 0.0 2.8e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF94728 - 8.8e-11 41.5 0.0 1.2e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF94728 - 3.6e-10 40.0 0.0 7.6e-10 39.0 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF94728 - 3.2e-09 36.3 0.1 1.8e-08 33.8 0.1 1.9 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF94728 - 3.9e-06 26.9 0.0 6.2e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 ORF94728 - 0.00013 21.1 0.1 0.00023 20.3 0.1 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain NmrA PF05368.13 ORF94728 - 0.001 18.7 0.0 0.0039 16.8 0.0 1.8 2 0 0 2 2 2 1 NmrA-like family adh_short PF00106.25 ORF94728 - 0.0017 17.9 0.1 0.0037 16.8 0.1 1.6 1 1 0 1 1 1 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF94728 - 0.0094 16.2 0.1 0.079 13.2 0.1 2.1 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain EamA PF00892.20 ORF88222 - 1.3e-19 70.7 35.3 1.6e-09 38.1 14.5 2.8 2 1 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 ORF88222 - 0.012 15.0 20.9 0.019 14.3 20.9 1.3 1 0 0 1 1 1 0 Triose-phosphate Transporter family Aldo_ket_red PF00248.21 ORF81460 - 5e-55 186.8 0.0 6e-55 186.5 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family WD40 PF00400.32 ORF79137 - 2.3e-12 47.2 8.5 0.0074 17.1 0.6 5.6 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF79137 - 1.4e-07 31.7 0.1 0.12 12.7 0.0 5.2 1 1 4 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF79137 - 0.023 14.0 0.4 2.9 7.1 0.0 3.2 2 1 1 3 3 3 0 WD40-like domain Frataxin_Cyay PF01491.16 ORF743 - 0.016 15.3 1.0 3 8.0 0.1 3.4 3 0 0 3 3 3 0 Frataxin-like domain Spt4 PF06093.13 ORF743 - 0.025 14.7 0.0 0.97 9.6 0.0 2.7 2 0 0 2 2 2 0 Spt4/RpoE2 zinc finger Thiolase_N PF00108.23 ORF67290 - 1.2e-64 218.2 0.1 1.7e-64 217.7 0.1 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 ORF67290 - 2.3e-47 159.7 0.5 1e-46 157.6 0.1 2.0 2 0 0 2 2 2 1 Thiolase, C-terminal domain ACP_syn_III_C PF08541.10 ORF67290 - 0.0052 16.9 0.0 0.026 14.7 0.0 2.2 2 1 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ketoacyl-synt PF00109.26 ORF67290 - 0.0055 16.3 0.0 0.017 14.7 0.0 1.8 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain TLD PF07534.16 ORF66398 - 3.5e-07 30.5 0.0 5e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 TLD F-box PF00646.33 ORF66398 - 0.087 12.7 1.0 0.21 11.5 0.1 2.2 2 0 0 2 2 2 0 F-box domain WD40 PF00400.32 ORF64893 - 2.3e-12 47.2 8.5 0.0074 17.1 0.6 5.6 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF64893 - 1.4e-07 31.7 0.1 0.12 12.7 0.0 5.2 1 1 4 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF64893 - 0.023 14.0 0.4 2.9 7.1 0.0 3.2 2 1 1 3 3 3 0 WD40-like domain Patatin PF01734.22 ORF58608 - 3.7e-21 76.3 0.3 5.4e-21 75.7 0.3 1.2 1 0 0 1 1 1 1 Patatin-like phospholipase TMEM52 PF14979.6 ORF54424 - 0.045 13.7 0.0 0.045 13.7 0.0 2.5 3 0 0 3 3 3 0 Transmembrane 52 Ni_hydr_CYTB PF01292.20 ORF54424 - 0.28 10.8 1.9 1.7 8.2 0.4 2.6 2 1 0 2 2 2 0 Prokaryotic cytochrome b561 DUF2976 PF11190.8 ORF54424 - 0.31 10.9 8.4 2.3 8.1 0.3 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2976) Baculo_11_kDa PF06143.11 ORF54424 - 1.3 8.6 9.8 0.15 11.6 0.7 3.3 3 0 0 3 3 3 0 Baculovirus 11 kDa family CitMHS PF03600.16 ORF54424 - 8 5.6 8.8 11 5.1 0.3 2.4 2 1 1 3 3 3 0 Citrate transporter Vut_1 PF02592.15 ORF54377 - 0.0043 17.4 3.7 1.9 8.8 0.1 2.6 2 1 1 3 3 3 2 Putative vitamin uptake transporter TPR_12 PF13424.6 ORF5338 - 1.4e-19 70.1 5.6 3.4e-08 33.6 0.0 4.3 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF5338 - 4.2e-13 48.5 0.3 1.5e-05 24.6 0.0 5.1 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF5338 - 1.1e-11 43.9 4.9 0.0014 18.6 0.0 5.4 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF5338 - 7.1e-10 39.4 3.0 0.00096 19.7 0.2 4.6 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF5338 - 4.1e-09 35.8 3.1 9.3e-06 25.3 0.0 4.4 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF5338 - 9e-09 34.9 2.8 0.00027 20.9 0.0 5.0 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF5338 - 7.8e-08 31.9 4.1 0.023 14.6 0.0 5.6 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF5338 - 2.4e-06 27.9 3.7 14 6.8 0.0 5.5 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF5338 - 5.3e-06 26.9 0.7 1.7 9.2 0.0 4.5 3 1 2 5 5 5 3 Tetratricopeptide repeat TPR_4 PF07721.14 ORF5338 - 0.0015 19.0 2.4 0.56 11.0 0.3 3.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF5338 - 0.011 16.3 1.9 25 5.8 0.0 4.7 5 0 0 5 5 4 0 Tetratricopeptide repeat PPR PF01535.20 ORF5338 - 0.3 11.4 2.0 59 4.2 0.0 4.3 6 0 0 6 6 6 0 PPR repeat Bul1_C PF04426.12 ORF53282 - 0.0016 17.9 18.1 0.0016 17.9 18.1 3.4 1 1 1 3 3 3 1 Bul1 C terminus DASH_Dam1 PF08653.10 ORF53282 - 2.1 8.2 8.1 3.9 7.4 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 FUSC PF04632.12 ORF53282 - 3.2 6.2 3.7 6.9 5.1 0.8 2.1 1 1 0 2 2 2 0 Fusaric acid resistance protein family ACP PF06857.11 ORF51900 - 3.2e-27 94.6 0.1 4.6e-27 94.1 0.1 1.2 1 0 0 1 1 1 1 Malonate decarboxylase delta subunit (MdcD) Bul1_C PF04426.12 ORF50936 - 0.0016 17.9 18.1 0.0016 17.9 18.1 3.4 1 1 1 3 3 3 1 Bul1 C terminus DASH_Dam1 PF08653.10 ORF50936 - 2.1 8.2 8.1 3.9 7.4 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 FUSC PF04632.12 ORF50936 - 3.2 6.2 3.7 6.9 5.1 0.8 2.1 1 1 0 2 2 2 0 Fusaric acid resistance protein family Peptidase_M24 PF00557.24 ORF47260 - 2.3e-65 220.2 0.1 3.1e-65 219.8 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 ORF47260 - 2e-15 57.6 0.1 3.9e-15 56.7 0.1 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain BetaGal_dom3 PF13363.6 ORF47260 - 0.12 11.9 0.0 0.52 9.9 0.0 1.9 2 0 0 2 2 2 0 Beta-galactosidase, domain 3 Bul1_C PF04426.12 ORF43674 - 0.0016 17.9 18.1 0.0016 17.9 18.1 3.4 1 1 1 3 3 3 1 Bul1 C terminus DASH_Dam1 PF08653.10 ORF43674 - 2.1 8.2 8.1 3.9 7.4 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 FUSC PF04632.12 ORF43674 - 3.2 6.2 3.7 6.9 5.1 0.8 2.1 1 1 0 2 2 2 0 Fusaric acid resistance protein family zf-RING_2 PF13639.6 ORF42415 - 2e-05 24.8 2.1 2e-05 24.8 2.1 2.7 3 0 0 3 3 3 1 Ring finger domain zf-rbx1 PF12678.7 ORF42415 - 5.8e-05 23.3 5.6 0.00013 22.1 5.6 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF42415 - 0.029 14.3 4.5 0.072 13.1 4.5 1.7 1 1 0 1 1 1 0 zinc-RING finger domain zf-RING_11 PF17123.5 ORF42415 - 0.052 13.3 1.4 0.052 13.3 1.4 2.8 3 0 0 3 3 3 0 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF42415 - 0.054 13.5 3.4 0.081 13.0 1.2 2.4 1 1 1 2 2 2 0 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF42415 - 0.071 13.0 4.4 0.23 11.4 4.4 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF42415 - 0.12 12.4 4.8 0.32 11.1 4.8 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger DUF2028 PF09667.10 ORF42415 - 0.13 12.2 0.2 0.18 11.7 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2028) FANCL_C PF11793.8 ORF42415 - 0.2 11.9 2.2 0.48 10.6 2.2 1.7 1 0 0 1 1 1 0 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 ORF42415 - 1.9 8.4 8.7 0.55 10.1 2.4 2.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 ORF42415 - 2.9 7.8 6.3 0.29 11.0 1.2 2.0 2 0 0 2 2 2 0 PHD-finger WD40 PF00400.32 ORF41624 - 2.3e-12 47.2 8.5 0.0074 17.1 0.6 5.6 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF41624 - 1.4e-07 31.7 0.1 0.12 12.7 0.0 5.2 1 1 4 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF41624 - 0.023 14.0 0.4 2.9 7.1 0.0 3.2 2 1 1 3 3 3 0 WD40-like domain SAM_2 PF07647.17 ORF38143 - 1.6e-15 57.0 0.8 3.9e-15 55.7 0.4 1.9 1 1 1 2 2 2 1 SAM domain (Sterile alpha motif) SAM_1 PF00536.30 ORF38143 - 4.7e-11 43.0 1.5 1.1e-10 41.8 0.6 2.1 1 1 1 2 2 2 1 SAM domain (Sterile alpha motif) MORN PF02493.20 ORF38143 - 4.2e-06 26.3 21.5 0.0009 19.0 2.9 3.6 3 0 0 3 3 3 2 MORN repeat SAM_PNT PF02198.16 ORF38143 - 0.0016 18.3 0.0 0.0036 17.3 0.0 1.5 1 0 0 1 1 1 1 Sterile alpha motif (SAM)/Pointed domain SAM_Ste50p PF09235.10 ORF38143 - 0.008 16.4 1.6 0.012 15.8 0.1 2.0 2 0 0 2 2 2 1 Ste50p, sterile alpha motif Bul1_C PF04426.12 ORF36235 - 0.0016 17.9 18.1 0.0016 17.9 18.1 3.4 1 1 1 3 3 3 1 Bul1 C terminus DASH_Dam1 PF08653.10 ORF36235 - 2.1 8.2 8.1 3.9 7.4 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 FUSC PF04632.12 ORF36235 - 3.2 6.2 3.7 6.9 5.1 0.8 2.1 1 1 0 2 2 2 0 Fusaric acid resistance protein family DAGAT PF03982.13 ORF36068 - 8.4e-29 100.4 0.0 1.2e-28 99.9 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol acyltransferase Mg_trans_NIPA PF05653.14 ORF27513 - 3.7e-07 29.6 8.7 3.7e-07 29.6 8.7 2.1 2 0 0 2 2 2 1 Magnesium transporter NIPA DUF3185 PF11381.8 ORF27513 - 0.00013 21.9 2.7 0.81 9.7 0.1 3.5 3 0 0 3 3 3 2 Protein of unknown function (DUF3185) EamA PF00892.20 ORF27513 - 0.0014 18.8 7.5 0.0014 18.8 7.5 3.4 3 2 1 4 4 4 1 EamA-like transporter family DUF2371 PF10177.9 ORF27513 - 0.031 14.4 2.4 3.2 7.9 0.0 3.0 2 1 0 2 2 2 0 Uncharacterised conserved protein (DUF2371) UPF0242 PF06785.11 ORF27513 - 2 8.4 5.5 13 5.8 1.3 2.9 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus Aldolase PF01081.19 ORF27454 - 0.1 12.0 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 KDPG and KHG aldolase FtsX_ECD PF18075.1 ORF26615 - 5.8e-16 58.9 0.0 9.1e-16 58.3 0.0 1.3 1 0 0 1 1 1 1 FtsX extracellular domain FtsX PF02687.21 ORF26615 - 1.4e-05 25.5 3.4 1.4e-05 25.5 3.4 2.8 3 0 0 3 3 3 1 FtsX-like permease family Bul1_C PF04426.12 ORF25907 - 0.0016 17.9 18.1 0.0016 17.9 18.1 3.4 1 1 1 3 3 3 1 Bul1 C terminus DASH_Dam1 PF08653.10 ORF25907 - 2.1 8.2 8.1 3.9 7.4 0.3 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 FUSC PF04632.12 ORF25907 - 3.2 6.2 3.7 6.9 5.1 0.8 2.1 1 1 0 2 2 2 0 Fusaric acid resistance protein family NDUF_B6 PF09782.9 ORF24519 - 0.01 16.0 1.0 0.01 16.0 1.0 1.9 2 0 0 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit RP-C_C PF11800.8 ORF24519 - 2.6 8.1 13.0 0.27 11.3 5.1 2.4 2 0 0 2 2 2 0 Replication protein C C-terminal region NAD_kinase PF01513.21 ORF2318 - 3.5e-42 144.6 0.0 2e-41 142.1 0.0 1.8 1 1 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 ORF2318 - 0.0013 18.3 0.0 0.0027 17.3 0.0 1.5 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Peptidase_C2 PF00648.21 ORF132721 - 5.4e-12 45.4 0.4 9.5e-12 44.5 0.4 1.4 1 0 0 1 1 1 1 Calpain family cysteine protease DUF547 PF04784.14 ORF132721 - 0.088 12.8 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF547 Citrate_synt PF00285.21 ORF131950 - 9e-103 344.1 0.4 1e-102 343.9 0.4 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF4607 PF15380.6 ORF131950 - 0.13 11.7 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4607) Ion_trans PF00520.31 ORF123647 - 1.9e-15 56.7 24.0 2.5e-15 56.4 24.0 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF123647 - 4e-07 29.1 26.9 4.2e-06 25.7 13.8 2.1 1 1 1 2 2 2 2 Polycystin cation channel PGG PF13962.6 ORF123647 - 0.028 14.2 3.9 0.039 13.8 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function Syntaxin_2 PF14523.6 ORF11403 - 0.0013 19.1 1.6 0.0061 16.9 0.1 2.5 2 1 0 2 2 2 1 Syntaxin-like protein DUF948 PF06103.11 ORF11403 - 0.015 15.6 2.7 1.9 8.8 0.1 3.1 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) CobT PF06213.12 ORF11403 - 7.2 5.9 16.3 5.8 6.2 14.8 1.6 1 1 0 1 1 1 0 Cobalamin biosynthesis protein CobT Mito_carr PF00153.27 ORF110847 - 2.3e-43 146.0 7.3 1.6e-13 50.4 0.0 5.1 4 1 1 5 5 5 5 Mitochondrial carrier protein Plasmodium_HRP PF05403.11 NODE_16850_length_1079_cov_588.613027_g12817_i0reverse_frame_1 - 2.2e-08 34.1 12.8 3.7e-07 30.2 12.7 2.3 1 1 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) HBS1_N PF08938.10 NODE_16850_length_1079_cov_588.613027_g12817_i0reverse_frame_1 - 0.042 14.2 0.0 0.042 14.2 0.0 2.8 2 1 0 2 2 2 0 HBS1 N-terminus T2SSppdC PF12528.8 NODE_16850_length_1079_cov_588.613027_g12817_i0reverse_frame_1 - 0.054 14.3 0.4 0.22 12.3 0.4 2.1 1 0 0 1 1 1 0 Type II secretion prepilin peptidase dependent protein C EELM2 PF15863.5 NODE_16850_length_1079_cov_588.613027_g12817_i0reverse_frame_1 - 0.088 12.9 0.0 0.088 12.9 0.0 3.3 2 1 3 5 5 5 0 Extended EGL-27 and MTA1 homology domain Plasmodium_HRP PF05403.11 NODE_16850_length_1079_cov_588.613027_g12817_i0forward_frame_1 - 5.2 6.8 50.3 0.67 9.7 24.8 3.2 2 1 1 3 3 3 0 Plasmodium histidine-rich protein (HRPII/III) Sigma_reg_C PF13791.6 NODE_16767_length_1082_cov_175.105062_g12754_i0reverse_frame_3 - 0.052 13.8 0.1 0.59 10.3 0.1 2.1 1 1 0 1 1 1 0 Sigma factor regulator C-terminal PAS_9 PF13426.7 NODE_16767_length_1082_cov_175.105062_g12754_i0reverse_frame_3 - 0.2 11.9 0.0 0.44 10.8 0.0 1.6 1 0 0 1 1 1 0 PAS domain Rod_C PF10493.9 NODE_16767_length_1082_cov_175.105062_g12754_i0forward_frame_2 - 0.072 11.5 1.6 0.095 11.1 1.6 1.1 1 0 0 1 1 1 0 Rough deal protein C-terminal region Peptidase_C26 PF07722.13 ORF96008 - 2e-16 60.4 0.2 1.1e-15 58.0 0.2 2.1 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF96008 - 1.7e-06 27.9 0.0 4.4e-06 26.6 0.0 1.7 1 1 0 1 1 1 1 Glutamine amidotransferase class-I FAD_binding_3 PF01494.19 ORF84247 - 8.5e-10 38.4 0.0 1.2e-05 24.7 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 ORF84247 - 4.5e-06 26.5 0.0 0.0066 16.1 0.0 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF84247 - 2.7e-05 23.4 0.6 0.14 11.2 0.0 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein Pyr_redox_2 PF07992.14 ORF84247 - 0.00094 18.5 0.0 0.0016 17.7 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 ORF84247 - 0.077 12.4 0.0 0.14 11.5 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 ORF84247 - 0.12 12.6 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Thi4 PF01946.17 ORF84247 - 0.21 10.8 0.0 0.3 10.3 0.0 1.2 1 0 0 1 1 1 0 Thi4 family Mlf1IP PF10248.9 ORF84077 - 3.7e-05 23.8 25.3 4.2e-05 23.6 23.4 2.0 1 1 1 2 2 2 1 Myelodysplasia-myeloid leukemia factor 1-interacting protein Baculo_PEP_C PF04513.12 ORF81929 - 0.00033 20.7 11.9 0.28 11.2 0.8 3.8 1 1 1 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus Ribonuc_2-5A PF06479.12 ORF81929 - 0.033 14.4 3.1 0.13 12.4 0.1 3.0 1 1 2 3 3 3 0 Ribonuclease 2-5A FliT PF05400.13 ORF81929 - 0.17 12.8 8.8 4.2 8.2 0.6 4.1 1 1 3 4 4 4 0 Flagellar protein FliT DUF2605 PF10792.9 ORF81929 - 0.59 10.1 4.5 1.5 8.8 0.6 3.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2605) Allexi_40kDa PF05549.11 ORF81929 - 3.2 7.2 12.5 1.5 8.3 2.4 2.7 1 1 2 3 3 3 0 Allexivirus 40kDa protein DUF1664 PF07889.12 ORF81929 - 4.1 7.5 9.9 2.3 8.3 0.5 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) AAA PF00004.29 ORF80809 - 6.5e-15 55.7 0.0 1.3e-14 54.8 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 ORF80809 - 6.3e-13 48.8 0.0 2.9e-11 43.4 0.0 2.4 1 1 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 ORF80809 - 1.2e-07 32.1 0.1 3.3e-07 30.6 0.1 1.8 1 0 0 1 1 1 1 Replication factor C C-terminal domain Rad17 PF03215.15 ORF80809 - 1.8e-07 31.3 0.0 3.3e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 ORF80809 - 1.6e-05 25.4 0.0 6.4e-05 23.4 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 ORF80809 - 2.5e-05 24.2 0.3 6.4e-05 22.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 ORF80809 - 3.4e-05 24.1 0.8 0.0061 16.9 0.0 3.0 3 0 0 3 3 3 1 AAA C-terminal domain DUF815 PF05673.13 ORF80809 - 0.00013 21.3 0.0 0.00019 20.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) RuvB_N PF05496.12 ORF80809 - 0.00016 21.4 0.0 0.00031 20.5 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF80809 - 0.00023 21.5 0.1 0.013 15.7 0.1 2.4 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF80809 - 0.00061 19.8 0.0 0.0012 18.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 ORF80809 - 0.0017 17.8 0.0 0.0069 15.8 0.0 1.9 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 ORF80809 - 0.0018 18.3 0.0 0.0038 17.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF80809 - 0.0042 16.8 0.0 0.011 15.5 0.0 1.7 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 ORF80809 - 0.0074 16.3 0.0 0.019 15.0 0.0 1.6 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 ORF80809 - 0.0083 16.5 0.2 0.056 13.8 0.1 2.0 1 1 1 2 2 2 1 AAA domain AAA_24 PF13479.6 ORF80809 - 0.0083 15.9 0.0 0.018 14.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 ORF80809 - 0.018 15.6 0.0 0.063 13.8 0.0 1.9 2 0 0 2 2 1 0 AAA domain DNA_pol3_delta PF06144.13 ORF80809 - 0.021 14.6 0.0 0.043 13.6 0.0 1.5 1 0 0 1 1 1 0 DNA polymerase III, delta subunit AAA_7 PF12775.7 ORF80809 - 0.021 14.4 0.0 0.035 13.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF2075 PF09848.9 ORF80809 - 0.035 13.3 0.0 0.099 11.9 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ATPase_2 PF01637.18 ORF80809 - 0.042 13.8 0.1 0.11 12.3 0.0 1.8 2 1 0 2 2 1 0 ATPase domain predominantly from Archaea TIP49 PF06068.13 ORF80809 - 0.045 13.0 0.0 0.12 11.5 0.0 1.7 1 1 0 1 1 1 0 TIP49 P-loop domain AAA_28 PF13521.6 ORF80809 - 0.052 13.8 0.0 0.11 12.7 0.0 1.7 1 1 0 1 1 1 0 AAA domain Kinesin PF00225.23 ORF80809 - 0.061 12.2 0.0 0.097 11.6 0.0 1.3 1 0 0 1 1 1 0 Kinesin motor domain TniB PF05621.11 ORF80809 - 0.087 12.2 0.0 0.53 9.7 0.0 2.0 2 0 0 2 2 2 0 Bacterial TniB protein RNA_helicase PF00910.22 ORF80809 - 0.087 13.2 0.0 0.29 11.6 0.0 1.9 2 0 0 2 2 1 0 RNA helicase AAA_3 PF07726.11 ORF80809 - 0.089 12.7 0.0 0.2 11.5 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 ORF80809 - 0.12 12.9 0.1 0.67 10.5 0.0 2.3 2 2 1 3 3 3 0 ABC transporter PhoH PF02562.16 ORF80809 - 0.14 11.6 0.3 1.7 8.1 0.0 2.3 1 1 0 2 2 2 0 PhoH-like protein Epimerase PF01370.21 ORF77341 - 2.2e-16 60.1 0.2 3.7e-16 59.3 0.2 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF77341 - 1.1e-14 54.1 0.2 1.5e-14 53.7 0.2 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF77341 - 1.2e-13 51.2 0.3 2.2e-13 50.3 0.3 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF77341 - 3e-07 29.9 0.0 5.1e-07 29.1 0.0 1.4 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF77341 - 2.1e-05 23.8 0.2 3.4e-05 23.1 0.2 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein adh_short PF00106.25 ORF77341 - 0.022 14.2 0.3 0.08 12.4 0.3 2.0 1 1 0 1 1 1 0 short chain dehydrogenase RmlD_sub_bind PF04321.17 ORF77341 - 0.065 12.3 0.0 0.089 11.9 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain AAA_12 PF13087.6 ORF75794 - 1.6e-43 148.7 0.0 2.2e-43 148.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF75794 - 5.1e-07 29.7 0.9 7.8e-07 29.1 0.1 1.7 2 0 0 2 2 2 1 AAA domain UvrD_C_2 PF13538.6 ORF75794 - 2.3e-05 24.1 0.1 7.3e-05 22.5 0.1 1.9 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C PF13361.6 ORF75794 - 0.00065 19.2 0.0 0.39 10.1 0.0 2.4 1 1 1 2 2 2 2 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 ORF75794 - 0.00067 19.5 0.1 0.066 12.9 0.0 2.3 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 ORF75794 - 0.007 16.1 0.1 0.019 14.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain Secretin_N PF03958.17 ORF75794 - 0.014 15.8 0.4 0.045 14.2 0.4 1.8 1 0 0 1 1 1 0 Bacterial type II/III secretion system short domain DUF2075 PF09848.9 ORF75794 - 0.21 10.8 0.1 12 5.0 0.0 2.5 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2075) Tetraspanin PF00335.20 ORF72787 - 1.7e-07 31.2 13.6 1.7e-07 31.2 13.6 2.3 1 1 1 2 2 2 2 Tetraspanin family SARAF PF06682.12 ORF72787 - 0.00018 21.3 0.0 0.00043 20.0 0.0 1.6 1 0 0 1 1 1 1 SOCE-associated regulatory factor of calcium homoeostasis EphA2_TM PF14575.6 ORF72787 - 0.22 12.4 0.0 0.22 12.4 0.0 3.8 4 0 0 4 4 4 0 Ephrin type-A receptor 2 transmembrane domain YajC PF02699.15 ORF72787 - 0.49 10.3 2.7 3.4 7.6 0.5 2.7 2 0 0 2 2 2 0 Preprotein translocase subunit DUF1774 PF08611.10 ORF72787 - 1.3 9.4 6.6 99 3.4 6.7 2.9 2 1 0 2 2 2 0 Fungal protein of unknown function (DUF1774) DUF4834 PF16118.5 ORF72787 - 2 9.4 0.0 2 9.4 0.0 3.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4834) EF-hand_7 PF13499.6 ORF71836 - 5.8e-07 29.9 3.5 9.8e-07 29.1 2.4 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF71836 - 6.8e-07 28.7 1.8 0.0012 18.6 0.3 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF71836 - 9.2e-07 28.0 1.0 0.0024 17.3 0.4 2.8 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF71836 - 2.4e-06 27.3 0.8 0.00077 19.3 0.5 2.6 1 1 1 2 2 2 2 EF-hand domain pair Cupin_8 PF13621.6 ORF69852 - 6.1e-09 36.0 0.0 1e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Cupin-like domain Cupin_2 PF07883.11 ORF69852 - 0.062 13.0 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 Cupin domain Imm51 PF15595.6 ORF69852 - 0.17 11.8 0.1 1.9 8.4 0.1 2.4 2 0 0 2 2 2 0 Immunity protein 51 Papilin_u7 PF16626.5 ORF66972 - 0.056 14.0 0.2 0.056 14.0 0.2 2.9 3 0 0 3 3 3 0 Linking region between Kunitz_BPTI and I-set on papilin PGAP1 PF07819.13 ORF61766 - 1.2e-07 31.8 0.0 1.8e-07 31.1 0.0 1.3 1 1 0 1 1 1 1 PGAP1-like protein Abhydrolase_6 PF12697.7 ORF61766 - 1.8e-07 32.0 2.2 2.6e-07 31.5 2.2 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family LCAT PF02450.15 ORF61766 - 3.2e-07 29.9 0.0 4.6e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase Palm_thioest PF02089.15 ORF61766 - 0.0001 22.2 0.0 0.00013 21.9 0.0 1.2 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Hydrolase_4 PF12146.8 ORF61766 - 0.00042 19.6 0.0 0.00061 19.1 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF61766 - 0.0011 18.7 0.0 0.0019 17.9 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF3089 PF11288.8 ORF61766 - 0.022 14.3 0.0 0.036 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) DUF915 PF06028.11 ORF61766 - 0.11 11.9 0.0 0.18 11.1 0.0 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) LIDHydrolase PF10230.9 ORF61766 - 0.13 11.8 0.0 0.18 11.3 0.0 1.1 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Abhydrolase_3 PF07859.13 ORF57429 - 4.6e-28 98.5 0.0 6e-28 98.2 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF57429 - 0.048 14.3 0.3 0.068 13.8 0.0 1.5 2 0 0 2 2 2 0 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF57429 - 0.062 12.9 0.1 0.18 11.5 0.1 1.6 2 0 0 2 2 2 0 alpha/beta hydrolase fold PsaL PF02605.15 ORF5491 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI PsaL PF02605.15 ORF54614 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI Citrate_ly_lig PF08218.11 ORF51898 - 4.2e-84 280.8 0.0 8.3e-84 279.8 0.0 1.5 2 0 0 2 2 2 1 Citrate lyase ligase C-terminal domain HIGH_NTase1 PF05636.11 ORF51898 - 1.4e-05 24.5 0.2 0.038 13.2 0.0 2.2 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase Acetyltransf_10 PF13673.7 ORF51898 - 0.00078 19.4 0.0 0.0014 18.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF51898 - 0.004 17.4 0.0 0.017 15.4 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family FR47 PF08445.10 ORF51898 - 0.053 13.5 0.0 0.099 12.6 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein CENP-F_C_Rb_bdg PF10490.9 ORF51898 - 0.097 12.1 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 Glycos_transf_4 PF00953.21 ORF45917 - 8.8e-34 116.8 16.2 8.8e-34 116.8 16.2 2.3 3 0 0 3 3 3 1 Glycosyl transferase family 4 MraY_sig1 PF10555.9 ORF45917 - 1e-05 24.8 3.3 1e-05 24.8 3.3 2.7 2 0 0 2 2 2 1 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Ndc1_Nup PF09531.10 ORF45917 - 0.0023 16.7 0.3 0.0023 16.7 0.3 1.7 3 0 0 3 3 3 1 Nucleoporin protein Ndc1-Nup EamA PF00892.20 ORF42970 - 1.9e-48 164.1 42.1 1.1e-25 90.4 15.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF3119 PF11317.8 ORF42970 - 0.055 13.8 1.2 0.16 12.2 1.2 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3119) Patatin PF01734.22 ORF41412 - 1.8e-18 67.5 0.0 3.8e-18 66.4 0.0 1.5 1 1 0 1 1 1 1 Patatin-like phospholipase Thioesterase PF00975.20 ORF20685 - 0.045 13.9 0.5 0.12 12.5 0.5 1.6 1 0 0 1 1 1 0 Thioesterase domain PGAP1 PF07819.13 ORF20685 - 0.17 11.6 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein PsaL PF02605.15 ORF19692 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI Epimerase PF01370.21 ORF19561 - 2.2e-16 60.1 0.3 3.7e-16 59.3 0.3 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF19561 - 5.3e-15 55.2 0.2 6.9e-15 54.8 0.2 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF19561 - 1.8e-13 50.6 0.3 3.4e-13 49.7 0.3 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF19561 - 5.7e-07 29.0 0.1 1e-06 28.2 0.1 1.4 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF19561 - 3.9e-05 22.9 0.2 6.2e-05 22.3 0.2 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 ORF19561 - 0.072 12.2 0.0 0.096 11.8 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain AMP-binding PF00501.28 ORF19520 - 4.3e-10 38.8 0.0 7.8e-10 37.9 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme Ank_2 PF12796.7 ORF19322 - 1.3e-72 240.4 17.7 1.8e-17 63.6 0.2 5.3 2 1 3 6 6 6 6 Ankyrin repeats (3 copies) Ank PF00023.30 ORF19322 - 1.9e-54 179.8 10.2 0.00012 22.4 0.0 10.1 10 0 0 10 10 10 10 Ankyrin repeat Ank_3 PF13606.6 ORF19322 - 2.6e-46 150.2 0.9 5.7e-05 23.2 0.0 10.5 10 1 0 10 10 10 8 Ankyrin repeat Ank_4 PF13637.6 ORF19322 - 3.6e-45 151.8 5.7 8e-08 32.7 0.0 7.5 3 2 5 9 9 9 8 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF19322 - 2.6e-40 136.0 13.8 2.6e-07 30.8 0.2 8.2 2 1 6 8 8 8 8 Ankyrin repeats (many copies) Nepo_coat_C PF03688.14 ORF19322 - 6.6e-05 22.8 0.2 0.0046 16.8 0.0 3.1 2 2 2 4 4 4 1 Nepovirus coat protein, C-terminal domain DUF4205 PF13898.6 ORF19322 - 0.0028 16.6 0.4 1.5 7.7 0.0 2.7 3 0 0 3 3 3 2 Domain of unknown function (DUF4205) PsaL PF02605.15 ORF139425 - 5.5e-30 104.0 1.3 1.7e-29 102.4 1.3 1.8 1 1 0 1 1 1 1 Photosystem I reaction centre subunit XI GDP_Man_Dehyd PF16363.5 ORF13692 - 1.1e-48 166.4 0.1 1.2e-48 166.2 0.1 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF13692 - 8.6e-41 140.0 0.1 1e-40 139.7 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF13692 - 8.7e-12 44.6 1.0 7e-11 41.7 1.0 1.9 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 ORF13692 - 3.3e-10 39.6 0.0 2.6e-09 36.6 0.0 2.2 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 ORF13692 - 9.8e-05 21.6 0.0 0.00022 20.4 0.0 1.6 2 0 0 2 2 2 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 ORF13692 - 0.00021 20.5 0.1 0.0037 16.5 0.1 2.6 1 1 0 1 1 1 1 Male sterility protein KR PF08659.10 ORF13692 - 0.0003 20.8 0.0 0.00049 20.1 0.0 1.4 1 0 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF13692 - 0.023 15.0 0.0 0.044 14.1 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Carb_anhydrase PF00194.21 ORF126941 - 6.7e-33 114.3 1.2 1e-32 113.7 1.2 1.3 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMEM154 PF15102.6 ORF126941 - 0.069 13.1 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 TMEM154 protein family SieB PF14163.6 ORF126941 - 0.082 12.4 0.4 1.2 8.6 0.2 2.2 2 0 0 2 2 2 0 Super-infection exclusion protein B Shisa PF13908.6 ORF126941 - 0.12 12.6 0.3 0.22 11.8 0.0 1.5 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator zf-RING_2 PF13639.6 ORF123192 - 1.7e-10 41.1 6.2 3e-10 40.3 6.2 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF123192 - 1.4e-08 34.4 6.4 2.4e-08 33.7 6.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF123192 - 5e-08 33.1 5.2 9.8e-08 32.2 5.2 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF123192 - 6.1e-06 26.1 5.9 1e-05 25.4 5.9 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF123192 - 1.6e-05 24.7 3.4 2.8e-05 23.9 3.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF123192 - 0.00011 21.9 7.3 0.00015 21.5 4.9 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF123192 - 0.00059 19.7 7.5 0.0011 18.7 7.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF123192 - 0.0015 18.5 1.2 0.0054 16.7 0.4 2.1 1 1 1 2 2 2 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF123192 - 0.0028 17.3 3.9 0.0055 16.3 3.9 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF123192 - 0.004 17.2 4.0 0.009 16.1 4.0 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF123192 - 0.0052 16.9 5.4 0.02 15.1 5.3 2.0 1 1 1 2 2 2 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF123192 - 0.036 13.9 4.0 0.073 12.9 4.0 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF123192 - 0.054 13.6 7.5 0.12 12.5 7.5 1.6 1 0 0 1 1 1 0 RING-variant domain Baculo_RING PF05883.11 ORF123192 - 0.097 12.7 2.2 0.23 11.5 2.2 1.6 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-C3H2C3 PF17122.5 ORF123192 - 0.21 11.6 3.9 0.44 10.6 3.9 1.6 1 0 0 1 1 1 0 Zinc-finger zf-RING-like PF08746.11 ORF123192 - 1 9.8 5.7 2 8.8 5.7 1.5 1 0 0 1 1 1 0 RING-like domain UCH PF00443.29 ORF12085 - 2.7e-28 99.2 3.6 4.6e-28 98.4 3.6 1.4 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF12085 - 5.5e-09 36.0 4.9 3.3e-08 33.5 1.6 2.2 1 1 1 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase zf-MIZ PF02891.20 ORF12085 - 0.0059 16.3 0.3 0.011 15.4 0.3 1.4 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger zinc_ribbon_11 PF11682.8 ORF12085 - 0.12 12.4 3.4 0.16 12.0 1.2 2.2 2 0 0 2 2 2 0 Probable zinc-ribbon Nramp PF01566.18 ORF119852 - 1.4e-60 205.2 5.3 1.7e-60 204.9 5.3 1.0 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein MNNL PF07657.13 ORF119852 - 9.3 6.4 8.0 1.9 8.6 1.1 2.5 3 0 0 3 3 3 0 N terminus of Notch ligand PseudoU_synth_1 PF01416.20 ORF115663 - 7e-13 49.0 0.0 1.7e-12 47.7 0.0 1.7 1 0 0 1 1 1 1 tRNA pseudouridine synthase GTP_cyclohydroI PF01227.22 ORF113637 - 7.8e-62 207.9 0.4 1e-61 207.5 0.4 1.1 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.6 ORF113637 - 0.1 12.7 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 QueF-like protein zf-RING_2 PF13639.6 ORF112611 - 1.7e-10 41.1 6.2 3e-10 40.3 6.2 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF112611 - 1.4e-08 34.4 6.4 2.4e-08 33.7 6.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF112611 - 5e-08 33.1 5.2 9.8e-08 32.2 5.2 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF112611 - 6.1e-06 26.1 5.9 1e-05 25.4 5.9 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF112611 - 1.6e-05 24.7 3.4 2.8e-05 23.9 3.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF112611 - 0.00011 21.9 7.3 0.00015 21.5 4.9 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF112611 - 0.00059 19.7 7.5 0.0011 18.7 7.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF112611 - 0.0015 18.5 1.2 0.0054 16.7 0.4 2.1 1 1 1 2 2 2 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF112611 - 0.0028 17.3 3.9 0.0055 16.3 3.9 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF112611 - 0.004 17.2 4.0 0.009 16.1 4.0 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF112611 - 0.0052 16.9 5.4 0.02 15.1 5.3 2.0 1 1 1 2 2 2 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF112611 - 0.036 13.9 4.0 0.073 12.9 4.0 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF112611 - 0.054 13.6 7.5 0.12 12.5 7.5 1.6 1 0 0 1 1 1 0 RING-variant domain Baculo_RING PF05883.11 ORF112611 - 0.097 12.7 2.2 0.23 11.5 2.2 1.6 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-C3H2C3 PF17122.5 ORF112611 - 0.21 11.6 3.9 0.44 10.6 3.9 1.6 1 0 0 1 1 1 0 Zinc-finger zf-RING-like PF08746.11 ORF112611 - 1 9.8 5.7 2 8.8 5.7 1.5 1 0 0 1 1 1 0 RING-like domain Mltc_N PF11873.8 ORF111914 - 4.5e-70 234.6 0.0 6.8e-70 234.0 0.0 1.3 1 0 0 1 1 1 1 Membrane-bound lytic murein transglycosylase C, N-terminal domain SLT PF01464.20 ORF111914 - 9.2e-33 112.4 0.0 1.4e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 Transglycosylase SLT domain Lysozyme_like PF13702.6 ORF111914 - 0.0011 18.7 0.1 0.062 13.0 0.1 2.3 1 1 0 1 1 1 1 Lysozyme-like SLT_2 PF13406.6 ORF111914 - 0.0022 17.3 0.0 0.004 16.4 0.0 1.4 1 0 0 1 1 1 1 Transglycosylase SLT domain Aa_trans PF01490.18 ORF93781 - 1.1e-09 37.6 6.1 1.5e-09 37.0 6.1 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks44.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks44.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks44.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks44.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:23:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RNase_H2-Ydr279 PF09468.10 NODE_86916_length_184_cov_3.140940_g78975_i0reverse_frame_3 - 0.074 13.2 0.0 0.08 13.1 0.0 1.1 1 0 0 1 1 1 0 Ydr279p protein family (RNase H2 complex component) wHTH domain zf-C3HC4_3 PF13920.6 NODE_86915_length_184_cov_3.140940_g78974_i0reverse_frame_3 - 0.022 14.6 5.2 0.022 14.6 5.2 1.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Lamprin PF06403.11 NODE_86914_length_184_cov_3.214765_g78973_i0reverse_frame_3 - 0.0035 17.3 0.6 0.0038 17.2 0.6 1.0 1 0 0 1 1 1 1 Lamprin PTS_IIB PF02302.17 NODE_86910_length_184_cov_4.013423_g78969_i0reverse_frame_2 - 0.00012 22.7 0.6 0.00038 21.1 0.1 1.8 2 0 0 2 2 2 1 PTS system, Lactose/Cellobiose specific IIB subunit Xan_ur_permease PF00860.20 NODE_86909_length_184_cov_4.201342_g78968_i0forward_frame_2 - 7.1e-11 41.4 1.4 7.5e-11 41.3 1.4 1.0 1 0 0 1 1 1 1 Permease family zf_CCCH_4 PF18345.1 NODE_86904_length_184_cov_6.671141_g78963_i0reverse_frame_3 - 0.064 13.3 0.8 0.11 12.6 0.8 1.4 1 0 0 1 1 1 0 Zinc finger domain Mit_KHE1 PF10173.9 NODE_86903_length_184_cov_7.516779_g78962_i0forward_frame_2 - 0.2 11.7 0.2 0.26 11.3 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Tetraspanin PF00335.20 NODE_86902_length_184_cov_8.718121_g78961_i0reverse_frame_3 - 0.31 10.7 5.5 0.34 10.6 5.5 1.0 1 0 0 1 1 1 0 Tetraspanin family SR-25 PF10500.9 NODE_86902_length_184_cov_8.718121_g78961_i0forward_frame_3 - 2.1 7.9 15.9 2.2 7.8 15.9 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein EphA2_TM PF14575.6 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_2 - 0.07 14.0 3.7 0.09 13.7 3.7 1.3 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Tmemb_9 PF05434.11 NODE_86900_length_184_cov_12.006711_g78959_i0reverse_frame_2 - 0.76 9.7 5.4 0.71 9.8 5.4 1.1 1 0 0 1 1 1 0 TMEM9 DUF5305 PF17231.2 NODE_86900_length_184_cov_12.006711_g78959_i0forward_frame_3 - 0.16 11.4 2.9 0.17 11.3 2.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) SSP160 PF06933.11 NODE_86900_length_184_cov_12.006711_g78959_i0forward_frame_3 - 0.68 8.1 19.5 0.77 7.9 19.5 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DUF4871 PF16167.5 NODE_86900_length_184_cov_12.006711_g78959_i0forward_frame_3 - 9.7 6.2 7.3 12 6.0 7.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4871) DUF4795 PF16043.5 NODE_86899_length_184_cov_12.335570_g78958_i0reverse_frame_2 - 0.033 13.8 4.9 0.034 13.7 4.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF4298 PF14131.6 NODE_86899_length_184_cov_12.335570_g78958_i0reverse_frame_2 - 0.18 11.8 3.6 0.2 11.6 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Spin-Ssty PF02513.17 NODE_86898_length_184_cov_13.852349_g78957_i0reverse_frame_3 - 0.055 13.2 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Spin/Ssty Family 2TM PF13239.6 NODE_86898_length_184_cov_13.852349_g78957_i0forward_frame_2 - 5.6 7.3 11.7 7.1 7.0 11.7 1.1 1 0 0 1 1 1 0 2TM domain DUF4648 PF15505.6 NODE_86897_length_184_cov_14.161074_g78956_i0reverse_frame_3 - 0.027 15.3 0.0 0.037 14.9 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4648) DUF2724 PF10893.8 NODE_86897_length_184_cov_14.161074_g78956_i0reverse_frame_3 - 0.08 12.8 0.7 0.11 12.3 0.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2724) ACP PF06857.11 NODE_86895_length_184_cov_16.476510_g78954_i0forward_frame_3 - 0.12 12.6 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Malonate decarboxylase delta subunit (MdcD) Inhibitor_I68 PF10468.9 NODE_86895_length_184_cov_16.476510_g78954_i0forward_frame_2 - 0.0037 17.6 0.2 0.0037 17.6 0.2 1.1 1 0 0 1 1 1 1 Carboxypeptidase inhibitor I68 YMF19 PF02326.15 NODE_86892_length_184_cov_18.181208_g78951_i0reverse_frame_2 - 0.033 15.0 0.2 0.035 14.9 0.2 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 6PGD PF00393.19 NODE_86890_length_184_cov_20.382550_g78949_i0reverse_frame_2 - 0.14 11.5 0.4 0.15 11.4 0.4 1.0 1 0 0 1 1 1 0 6-phosphogluconate dehydrogenase, C-terminal domain Rrn6 PF10214.9 NODE_86887_length_184_cov_20.751678_g78946_i0reverse_frame_3 - 7.8 4.9 11.4 8.1 4.8 11.4 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor CMS1 PF14617.6 NODE_86887_length_184_cov_20.751678_g78946_i0reverse_frame_2 - 0.05 12.9 3.5 0.057 12.8 3.5 1.0 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit OAD_gamma PF04277.13 NODE_86887_length_184_cov_20.751678_g78946_i0reverse_frame_2 - 2.1 9.0 4.1 2.4 8.8 4.1 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain SMN PF06003.12 NODE_86887_length_184_cov_20.751678_g78946_i0forward_frame_3 - 4.6 6.4 6.5 4.7 6.4 6.5 1.0 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) Pkinase_Tyr PF07714.17 NODE_86876_length_184_cov_30.000000_g78935_i0reverse_frame_3 - 0.0038 16.6 0.2 0.0039 16.5 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 NODE_86876_length_184_cov_30.000000_g78935_i0reverse_frame_3 - 0.14 11.5 0.2 0.16 11.3 0.2 1.0 1 0 0 1 1 1 0 Protein kinase domain PIP49_N PF14875.6 NODE_86873_length_184_cov_30.832215_g78932_i0reverse_frame_3 - 0.0055 16.6 1.9 0.0062 16.4 1.9 1.0 1 0 0 1 1 1 1 N-term cysteine-rich ER, FAM69 Ndc1_Nup PF09531.10 NODE_86872_length_184_cov_30.979866_g78931_i0reverse_frame_3 - 0.42 9.3 4.1 0.44 9.2 4.1 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup MPS-4 PF17523.2 NODE_86872_length_184_cov_30.979866_g78931_i0reverse_frame_2 - 0.33 11.1 4.2 0.4 10.8 4.2 1.2 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF3740 PF12548.8 NODE_86872_length_184_cov_30.979866_g78931_i0forward_frame_2 - 0.072 13.5 0.4 0.083 13.3 0.4 1.0 1 0 0 1 1 1 0 Sulfatase protein DUF2768 PF10966.8 NODE_86869_length_184_cov_32.208054_g78928_i0reverse_frame_3 - 0.0016 18.9 1.2 0.002 18.5 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2768) DUF5561 PF17716.1 NODE_86866_length_184_cov_33.241611_g78925_i0reverse_frame_2 - 0.15 11.3 0.8 0.17 11.2 0.8 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5561) DEFB136 PF17333.2 NODE_86865_length_184_cov_33.429530_g78924_i0reverse_frame_2 - 0.12 12.3 2.0 0.55 10.2 0.1 2.0 1 1 1 2 2 2 0 Beta defensin 136 Tetraspanin PF00335.20 NODE_86861_length_184_cov_35.536913_g78920_i0reverse_frame_3 - 1.4 8.5 6.5 1.3 8.6 6.5 1.1 1 0 0 1 1 1 0 Tetraspanin family Babuvirus_MP PF07234.11 NODE_86861_length_184_cov_35.536913_g78920_i0reverse_frame_3 - 1.9 8.7 6.2 1.9 8.7 6.2 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF4834 PF16118.5 NODE_86861_length_184_cov_35.536913_g78920_i0reverse_frame_3 - 7.2 7.6 7.4 7.1 7.7 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) TFIIF_alpha PF05793.12 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 1.2 7.7 19.0 1.2 7.6 19.0 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) FAM176 PF14851.6 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 1.2 8.8 11.8 1.3 8.7 11.8 1.2 1 0 0 1 1 1 0 FAM176 family PBP1_TM PF14812.6 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 1.4 9.3 16.7 1.7 9.1 16.7 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal NOA36 PF06524.12 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 1.9 7.8 14.9 2.1 7.6 14.9 1.0 1 0 0 1 1 1 0 NOA36 protein Coilin_N PF15862.5 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 3.3 7.5 14.4 3.9 7.3 14.4 1.0 1 0 0 1 1 1 0 Coilin N-terminus PBP_sp32 PF07222.12 NODE_86861_length_184_cov_35.536913_g78920_i0forward_frame_3 - 5.9 6.3 12.0 7 6.0 12.0 1.0 1 0 0 1 1 1 0 Proacrosin binding protein sp32 UPF0139 PF03669.13 NODE_86857_length_184_cov_37.677852_g78916_i0forward_frame_3 - 0.041 13.8 0.1 0.042 13.7 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) RTA1 PF04479.13 NODE_86857_length_184_cov_37.677852_g78916_i0forward_frame_2 - 0.054 13.1 0.1 0.054 13.1 0.1 1.0 1 0 0 1 1 1 0 RTA1 like protein Colipase PF01114.18 NODE_86852_length_184_cov_41.838926_g78911_i0reverse_frame_2 - 1.9 8.2 10.0 3.3 7.4 3.3 2.5 2 1 0 2 2 2 0 Colipase, N-terminal domain NCD3G PF07562.14 NODE_86852_length_184_cov_41.838926_g78911_i0forward_frame_2 - 0.0095 15.9 2.8 0.014 15.4 2.8 1.2 1 0 0 1 1 1 1 Nine Cysteines Domain of family 3 GPCR Herpes_UL79 PF03049.14 NODE_86849_length_184_cov_44.375839_g78908_i0forward_frame_3 - 0.11 12.1 0.1 0.11 12.1 0.1 1.0 1 0 0 1 1 1 0 UL79 family Connexin43 PF03508.13 NODE_86846_length_184_cov_46.510067_g78905_i0forward_frame_2 - 0.035 13.7 2.4 0.062 12.9 2.4 1.4 1 0 0 1 1 1 0 Gap junction alpha-1 protein (Cx43) DUF639 PF04842.12 NODE_86843_length_184_cov_55.355705_g78902_i0reverse_frame_3 - 0.09 12.2 0.1 0.1 12.0 0.1 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF639) Fer4_10 PF13237.6 NODE_86841_length_184_cov_58.033557_g78900_i0forward_frame_2 - 0.0084 16.2 2.3 0.01 15.9 2.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 NODE_86841_length_184_cov_58.033557_g78900_i0forward_frame_2 - 0.01 15.9 4.4 0.014 15.4 4.4 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_16 PF13484.6 NODE_86841_length_184_cov_58.033557_g78900_i0forward_frame_2 - 0.055 14.4 2.6 0.055 14.4 2.6 1.5 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 NODE_86841_length_184_cov_58.033557_g78900_i0forward_frame_2 - 0.12 13.0 4.9 0.18 12.4 4.9 1.5 1 1 0 1 1 1 0 4Fe-4S binding domain Fer4 PF00037.27 NODE_86841_length_184_cov_58.033557_g78900_i0forward_frame_2 - 0.87 9.5 8.5 1.5 8.8 8.5 1.3 1 0 0 1 1 1 0 4Fe-4S binding domain SNARE PF05739.19 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 1.2e-05 25.2 1.1 1.9e-05 24.5 1.1 1.4 1 0 0 1 1 1 1 SNARE domain RIFIN PF02009.16 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.016 15.2 2.3 0.016 15.1 2.3 1.0 1 0 0 1 1 1 0 Rifin Synaptobrevin PF00957.21 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.06 13.2 2.3 0.075 12.8 2.3 1.1 1 0 0 1 1 1 0 Synaptobrevin DUF2207 PF09972.9 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.11 11.2 0.2 0.11 11.2 0.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Chordopox_A13L PF05961.11 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.16 12.2 3.5 0.21 11.8 3.5 1.2 1 0 0 1 1 1 0 Chordopoxvirus A13L protein TMEM154 PF15102.6 NODE_86840_length_184_cov_58.268456_g78899_i0reverse_frame_2 - 0.2 11.5 0.4 0.2 11.6 0.4 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF2975 PF11188.8 NODE_86836_length_184_cov_63.926174_g78895_i0forward_frame_2 - 0.17 11.8 0.5 0.17 11.7 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) Endotoxin_C2 PF18449.1 NODE_86835_length_184_cov_65.348993_g78894_i0reverse_frame_3 - 0.042 14.2 0.0 0.054 13.8 0.0 1.1 1 0 0 1 1 1 0 Delta endotoxin DNA_pol3_delta2 PF13177.6 NODE_86831_length_184_cov_79.208054_g78890_i0reverse_frame_3 - 0.19 11.5 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III, delta subunit TOBE PF03459.17 NODE_86830_length_184_cov_80.328859_g78889_i0forward_frame_3 - 0.02 15.2 0.0 0.029 14.7 0.0 1.2 1 0 0 1 1 1 0 TOBE domain MSSP PF03940.13 NODE_86829_length_184_cov_88.959732_g78888_i0reverse_frame_2 - 0.027 14.0 10.1 0.034 13.8 10.1 1.1 1 0 0 1 1 1 0 Male specific sperm protein YqzE PF14038.6 NODE_86829_length_184_cov_88.959732_g78888_i0forward_frame_3 - 0.091 12.8 2.3 0.14 12.2 2.3 1.3 1 0 0 1 1 1 0 YqzE-like protein RCDG1 PF15725.5 NODE_86825_length_184_cov_111.201342_g78884_i0reverse_frame_2 - 0.34 11.4 9.0 0.41 11.1 8.8 1.4 1 1 0 1 1 1 0 Renal cancer differentiation gene 1 protein KH_1 PF00013.29 NODE_86825_length_184_cov_111.201342_g78884_i0forward_frame_2 - 0.006 16.4 0.1 0.0071 16.2 0.1 1.1 1 0 0 1 1 1 1 KH domain TMEM208_SND2 PF05620.11 NODE_86824_length_184_cov_116.765101_g78883_i0reverse_frame_3 - 0.087 12.6 2.0 0.095 12.5 2.0 1.0 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 DUF2873 PF11395.8 NODE_86824_length_184_cov_116.765101_g78883_i0reverse_frame_3 - 4.1 7.3 15.5 88 3.1 15.5 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2873) DUF1952 PF09189.10 NODE_86820_length_184_cov_126.852349_g78879_i0reverse_frame_3 - 0.068 13.0 0.0 0.088 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1952) tRNA_int_end_N2 PF12928.7 NODE_86820_length_184_cov_126.852349_g78879_i0reverse_frame_3 - 0.21 11.8 0.3 0.21 11.8 0.3 1.5 2 0 0 2 2 2 0 tRNA-splicing endonuclease subunit sen54 N-term Asp PF00026.23 NODE_86818_length_184_cov_133.979866_g78877_i0reverse_frame_3 - 4.2e-09 36.3 0.3 4.7e-09 36.1 0.3 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease zf-C2H2 PF00096.26 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 8.5e-07 29.1 1.4 8.5e-07 29.1 1.4 2.1 2 0 0 2 2 2 1 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.00012 22.3 1.8 0.011 16.1 0.7 2.1 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.00061 20.4 2.9 0.00068 20.3 0.6 2.0 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.00091 19.5 1.4 0.00091 19.5 1.4 2.0 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.0021 18.4 2.7 0.003 17.9 0.6 2.1 2 0 0 2 2 2 1 Zinc-finger of C2H2 type DUF629 PF04780.12 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.013 14.0 1.4 0.013 14.0 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) Actin_micro PF17003.5 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.015 14.5 1.3 0.016 14.4 1.3 1.0 1 0 0 1 1 1 0 Putative actin-like family zf-LYAR PF08790.11 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.034 14.1 0.2 0.06 13.3 0.2 1.5 1 0 0 1 1 1 0 LYAR-type C2HC zinc finger FOXP-CC PF16159.5 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.036 14.7 0.2 0.055 14.1 0.1 1.4 1 1 0 1 1 1 0 FOXP coiled-coil domain zf-C2H2_2 PF12756.7 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.039 14.3 2.5 0.062 13.6 2.5 1.4 1 1 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Zn-ribbon_8 PF09723.10 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.063 13.4 0.2 0.082 13.0 0.2 1.3 1 0 0 1 1 1 0 Zinc ribbon domain zf-C2H2_8 PF15909.5 NODE_86816_length_184_cov_193.489933_g78875_i0forward_frame_2 - 0.13 12.6 2.3 0.14 12.5 2.3 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon ABC_export PF16962.5 NODE_86811_length_184_cov_462.691275_g78870_i0reverse_frame_3 - 0.8 8.1 6.6 0.84 8.0 6.6 1.0 1 0 0 1 1 1 0 Putative ABC exporter OAD_gamma PF04277.13 NODE_86809_length_184_cov_1303.369128_g78868_i0reverse_frame_3 - 1.1 9.9 2.7 27 5.4 0.6 2.0 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain SUD-M PF11633.8 NODE_86809_length_184_cov_1303.369128_g78868_i0reverse_frame_2 - 0.19 11.4 1.6 0.2 11.4 1.6 1.1 1 0 0 1 1 1 0 Single-stranded poly(A) binding domain Olfactory_mark PF06554.12 NODE_86808_length_184_cov_4045.583893_g78867_i0reverse_frame_3 - 0.028 14.2 0.0 0.031 14.0 0.0 1.1 1 0 0 1 1 1 0 Olfactory marker protein AAA_34 PF13872.6 NODE_86805_length_185_cov_0.800000_g78864_i0forward_frame_3 - 1.6e-11 43.7 0.0 1.8e-11 43.5 0.0 1.1 1 0 0 1 1 1 1 P-loop containing NTP hydrolase pore-1 AAA PF00004.29 NODE_86803_length_185_cov_0.800000_g78862_i0reverse_frame_3 - 3.9e-14 53.2 0.0 4.1e-14 53.2 0.0 1.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Endonuc-dimeris PF09124.10 NODE_86801_length_185_cov_0.833333_g78860_i0reverse_frame_3 - 0.066 13.4 0.1 0.09 12.9 0.1 1.2 1 0 0 1 1 1 0 T4 recombination endonuclease VII, dimerisation MORN PF02493.20 NODE_86800_length_185_cov_0.833333_g78859_i0reverse_frame_3 - 0.008 16.0 1.1 0.019 14.8 0.2 2.2 3 1 0 3 3 3 1 MORN repeat zf-HC5HC2H PF13771.6 NODE_86799_length_185_cov_0.846667_g78858_i0reverse_frame_2 - 0.045 14.0 0.5 0.05 13.9 0.5 1.1 1 0 0 1 1 1 0 PHD-like zinc-binding domain Zn_Tnp_IS1 PF03811.13 NODE_86796_length_185_cov_0.873333_g78855_i0forward_frame_3 - 0.044 13.5 0.6 0.044 13.5 0.6 2.1 2 0 0 2 2 2 0 InsA N-terminal domain GST_C PF00043.25 NODE_86795_length_185_cov_0.893333_g78854_i0reverse_frame_3 - 0.18 12.0 0.0 0.24 11.7 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain CENP-B_dimeris PF09026.10 NODE_86793_length_185_cov_0.906667_g78852_i0reverse_frame_2 - 0.7 10.3 7.7 0.83 10.1 7.7 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain SR-25 PF10500.9 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_3 - 0.057 13.0 11.5 0.065 12.8 11.5 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Peptidase_M17_N PF02789.17 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_2 - 0.14 12.0 2.2 0.15 11.9 2.2 1.1 1 0 0 1 1 1 0 Cytosol aminopeptidase family, N-terminal domain DUF3377 PF11857.8 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_2 - 1.8 8.5 9.1 2.1 8.3 9.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) VirB8 PF04335.13 NODE_86793_length_185_cov_0.906667_g78852_i0forward_frame_2 - 2 8.2 5.6 2.1 8.1 5.6 1.0 1 0 0 1 1 1 0 VirB8 protein RecA PF00154.21 NODE_86790_length_185_cov_0.913333_g78849_i0reverse_frame_2 - 1.6e-22 80.3 0.1 1.7e-22 80.2 0.1 1.0 1 0 0 1 1 1 1 recA bacterial DNA recombination protein EF-hand_7 PF13499.6 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 2.7e-10 40.6 0.1 3e-10 40.4 0.1 1.0 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 3.8e-10 38.6 0.8 5.7e-06 25.5 0.0 2.2 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 1e-08 34.3 0.6 2.5e-05 23.6 0.0 2.1 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 5.9e-07 29.2 0.2 4e-06 26.6 0.1 1.9 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 1.1e-06 28.1 0.9 0.0019 18.0 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain Dockerin_1 PF00404.18 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 0.034 14.3 0.1 0.043 14.0 0.1 1.2 1 0 0 1 1 1 0 Dockerin type I domain SPARC_Ca_bdg PF10591.9 NODE_86789_length_185_cov_0.920000_g78848_i0reverse_frame_2 - 0.19 12.1 0.0 0.21 11.9 0.0 1.0 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region DUF3937 PF13073.6 NODE_86789_length_185_cov_0.920000_g78848_i0forward_frame_2 - 0.06 13.5 0.4 0.071 13.2 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3937) TraF PF13728.6 NODE_86785_length_185_cov_0.933333_g78844_i0reverse_frame_3 - 1 9.2 6.1 1 9.1 6.1 1.0 1 0 0 1 1 1 0 F plasmid transfer operon protein Lamprin PF06403.11 NODE_86785_length_185_cov_0.933333_g78844_i0forward_frame_3 - 6.7 6.7 8.9 38 4.2 8.9 1.8 1 1 0 1 1 1 0 Lamprin Lamprin PF06403.11 NODE_86785_length_185_cov_0.933333_g78844_i0forward_frame_2 - 0.85 9.6 5.1 1 9.3 5.1 1.2 1 0 0 1 1 1 0 Lamprin TPR_2 PF07719.17 NODE_86784_length_185_cov_0.946667_g78843_i0forward_frame_3 - 3.3e-05 23.7 0.0 0.00042 20.2 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_86784_length_185_cov_0.946667_g78843_i0forward_frame_3 - 0.02 14.7 0.1 0.68 9.8 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Helitron_like_N PF14214.6 NODE_86783_length_185_cov_0.953333_g78842_i0reverse_frame_3 - 2.2e-07 31.3 0.1 2.5e-07 31.1 0.1 1.1 1 0 0 1 1 1 1 Helitron helicase-like domain at N-terminus Gag_p10 PF02337.17 NODE_86782_length_185_cov_0.966667_g78841_i0reverse_frame_2 - 0.062 13.3 0.1 0.072 13.0 0.1 1.2 1 0 0 1 1 1 0 Retroviral GAG p10 protein VIT1 PF01988.19 NODE_86782_length_185_cov_0.966667_g78841_i0reverse_frame_2 - 0.062 13.2 0.1 0.062 13.2 0.1 1.1 1 0 0 1 1 1 0 VIT family Lamprin PF06403.11 NODE_86781_length_185_cov_0.973333_g78840_i0forward_frame_3 - 0.071 13.1 2.4 0.081 12.9 2.4 1.1 1 0 0 1 1 1 0 Lamprin STAG PF08514.11 NODE_86776_length_185_cov_1.006667_g78835_i0reverse_frame_2 - 0.076 12.9 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 STAG domain UL41A PF17591.2 NODE_86775_length_185_cov_1.006667_g78834_i0forward_frame_2 - 0.99 9.6 4.2 0.59 10.3 2.7 1.5 1 1 1 2 2 2 0 Herpesvirus UL41A ALMS_repeat PF18727.1 NODE_86769_length_185_cov_1.040000_g78828_i0reverse_frame_3 - 0.21 11.5 0.4 0.29 11.1 0.4 1.2 1 0 0 1 1 1 0 Alstrom syndrome repeat DUF126 PF01989.16 NODE_86763_length_185_cov_1.046667_g78822_i0forward_frame_3 - 0.067 13.0 0.1 0.5 10.2 0.1 1.8 1 1 1 2 2 2 0 Aconitase X swivel domain DUF3789 PF12664.7 NODE_86763_length_185_cov_1.046667_g78822_i0forward_frame_3 - 0.068 12.9 0.3 0.1 12.3 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3789) Trehalose_PPase PF02358.16 NODE_86761_length_185_cov_1.053333_g78820_i0reverse_frame_2 - 0.0037 16.4 0.0 0.0039 16.4 0.0 1.1 1 0 0 1 1 1 1 Trehalose-phosphatase DUF2892 PF11127.8 NODE_86760_length_185_cov_1.053333_g78819_i0reverse_frame_2 - 0.087 12.9 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) RseC_MucC PF04246.12 NODE_86758_length_185_cov_1.053333_g78817_i0reverse_frame_2 - 0.13 12.2 1.7 0.14 12.1 1.7 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF3377 PF11857.8 NODE_86757_length_185_cov_1.053333_g78816_i0reverse_frame_2 - 0.084 12.8 0.2 0.094 12.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) Ribosomal_S16 PF00886.19 NODE_86753_length_185_cov_1.060000_g78812_i0forward_frame_2 - 0.00013 21.9 0.0 0.00015 21.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S16 Corona_M PF01635.18 NODE_86751_length_185_cov_1.060000_g78810_i0forward_frame_2 - 0.09 12.1 0.2 0.095 12.0 0.2 1.1 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein TMEM219 PF14940.6 NODE_86748_length_185_cov_1.060000_g78807_i0reverse_frame_2 - 0.047 13.3 0.1 0.05 13.2 0.1 1.0 1 0 0 1 1 1 0 Transmembrane 219 Mito_carr PF00153.27 NODE_86746_length_185_cov_1.060000_g78805_i0reverse_frame_2 - 0.095 12.6 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial carrier protein Phage_Coat_B PF05356.11 NODE_86745_length_185_cov_1.060000_g78804_i0reverse_frame_2 - 0.2 11.6 0.9 0.23 11.4 0.9 1.1 1 0 0 1 1 1 0 Phage Coat protein B Antifungal_pept PF11410.8 NODE_86732_length_185_cov_1.066667_g78791_i0reverse_frame_2 - 0.0024 17.7 1.2 0.0043 16.9 1.2 1.3 1 0 0 1 1 1 1 Antifungal peptide PsbL PF02419.17 NODE_86731_length_185_cov_1.066667_g78790_i0reverse_frame_3 - 0.052 13.5 0.1 0.066 13.2 0.1 1.2 1 0 0 1 1 1 0 PsbL protein COX6B PF02297.17 NODE_86725_length_185_cov_1.066667_g78784_i0forward_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIb Hpre_diP_synt_I PF07456.11 NODE_86722_length_185_cov_1.066667_g78781_i0reverse_frame_2 - 0.11 12.5 0.2 0.13 12.3 0.2 1.1 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase component I DUF2274 PF10038.9 NODE_86720_length_185_cov_1.066667_g78779_i0reverse_frame_2 - 0.16 12.4 0.0 0.2 12.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2274) STAG PF08514.11 NODE_86714_length_185_cov_1.066667_g78773_i0forward_frame_3 - 0.046 13.6 0.1 0.047 13.6 0.1 1.1 1 0 0 1 1 1 0 STAG domain TAFA PF12020.8 NODE_86710_length_185_cov_1.066667_g78769_i0reverse_frame_3 - 0.086 13.3 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 TAFA family DUF4186 PF13811.6 NODE_86710_length_185_cov_1.066667_g78769_i0forward_frame_2 - 0.16 12.0 0.7 0.16 12.0 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) zf-ribbon_3 PF13248.6 NODE_86702_length_185_cov_1.066667_g78761_i0forward_frame_2 - 0.075 12.5 0.2 0.075 12.5 0.2 2.5 3 1 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 NODE_86702_length_185_cov_1.066667_g78761_i0forward_frame_2 - 0.17 11.7 0.2 0.17 11.7 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 NODE_86702_length_185_cov_1.066667_g78761_i0forward_frame_2 - 0.45 10.5 3.0 0.2 11.6 1.0 1.5 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Hap4_Hap_bind PF10297.9 NODE_86700_length_185_cov_1.066667_g78759_i0reverse_frame_2 - 0.025 14.7 0.5 0.05 13.7 0.5 1.5 1 0 0 1 1 1 0 Minimal binding motif of Hap4 for binding to Hap2/3/5 CCER1 PF15482.6 NODE_86695_length_185_cov_1.066667_g78754_i0reverse_frame_3 - 0.43 10.4 2.9 0.44 10.4 2.9 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 DUF1560 PF07597.11 NODE_86693_length_185_cov_1.066667_g78752_i0reverse_frame_2 - 0.039 14.0 0.3 0.058 13.4 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1560) Pox_T4_N PF04491.12 NODE_86693_length_185_cov_1.066667_g78752_i0forward_frame_2 - 0.16 11.8 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Poxvirus T4 protein, N terminus NPP PF08384.10 NODE_86691_length_185_cov_1.066667_g78750_i0forward_frame_3 - 0.036 14.1 0.1 0.058 13.5 0.1 1.3 1 0 0 1 1 1 0 Pro-opiomelanocortin, N-terminal region NICE-1 PF15845.5 NODE_86691_length_185_cov_1.066667_g78750_i0forward_frame_2 - 0.037 14.8 6.2 0.037 14.8 6.2 1.7 1 1 0 1 1 1 0 Cysteine-rich C-terminal 1 family PDE6_gamma PF04868.12 NODE_86683_length_185_cov_1.066667_g78742_i0forward_frame_3 - 0.12 12.7 0.2 0.15 12.3 0.2 1.2 1 0 0 1 1 1 0 Retinal cGMP phosphodiesterase, gamma subunit Cir_Bir_Yir PF06022.11 NODE_86679_length_185_cov_1.066667_g78738_i0reverse_frame_3 - 0.0053 16.3 1.8 0.0062 16.1 1.8 1.3 1 1 0 1 1 1 1 Plasmodium variant antigen protein Cir/Yir/Bir Phe_hydrox_dim PF07976.12 NODE_86677_length_185_cov_1.066667_g78736_i0forward_frame_3 - 0.071 13.1 0.0 0.071 13.1 0.0 1.1 1 0 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain Ribosomal_L4 PF00573.22 NODE_86674_length_185_cov_1.066667_g78733_i0forward_frame_2 - 0.0054 16.4 1.7 0.0063 16.2 1.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family DUF2644 PF10841.8 NODE_86672_length_185_cov_1.066667_g78731_i0forward_frame_3 - 0.12 12.7 0.3 0.13 12.5 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2644) Ribosomal_L18 PF17135.4 NODE_86671_length_185_cov_1.066667_g78730_i0forward_frame_3 - 0.079 12.4 0.0 0.079 12.3 0.0 1.0 1 0 0 1 1 1 0 Ribosomal protein 60S L18 and 50S L18e zf-P11 PF03854.14 NODE_86669_length_185_cov_1.086667_g78728_i0reverse_frame_2 - 0.063 12.9 7.2 1.2 8.8 1.4 2.2 1 1 1 2 2 2 0 P-11 zinc finger Ribosomal_L40e PF01020.17 NODE_86669_length_185_cov_1.086667_g78728_i0reverse_frame_2 - 0.088 12.7 4.5 0.15 12.0 4.5 1.4 1 1 0 1 1 1 0 Ribosomal L40e family DUF1824 PF08854.10 NODE_86666_length_185_cov_1.113333_g78725_i0forward_frame_2 - 0.11 12.5 0.1 0.12 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1824) OTT_1508_deam PF14441.6 NODE_86663_length_185_cov_1.133333_g78722_i0reverse_frame_3 - 0.12 12.4 0.4 0.12 12.4 0.4 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase Iron_traffic PF04362.14 NODE_86661_length_185_cov_1.133333_g78720_i0reverse_frame_2 - 0.26 11.0 1.2 1.4 8.7 0.3 1.8 1 1 1 2 2 2 0 Bacterial Fe(2+) trafficking Gpi16 PF04113.14 NODE_86659_length_185_cov_1.140000_g78718_i0reverse_frame_3 - 0.075 11.5 0.0 0.078 11.4 0.0 1.0 1 0 0 1 1 1 0 Gpi16 subunit, GPI transamidase component Ribosomal_L37e PF01907.19 NODE_86657_length_185_cov_1.146667_g78716_i0reverse_frame_3 - 0.023 14.9 4.4 0.023 14.9 4.4 1.9 2 0 0 2 2 2 0 Ribosomal protein L37e zf-C2HC5 PF06221.13 NODE_86645_length_185_cov_1.173333_g78704_i0reverse_frame_3 - 0.12 12.4 1.8 10 6.2 0.1 2.1 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type DUF2024 PF09630.10 NODE_86645_length_185_cov_1.173333_g78704_i0reverse_frame_3 - 0.36 10.7 4.2 3 7.8 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF2024) Fer4_4 PF12800.7 NODE_86644_length_185_cov_1.173333_g78703_i0reverse_frame_2 - 1.8 9.2 8.8 3.9 8.2 3.8 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain SLATT_2 PF18183.1 NODE_86643_length_185_cov_1.180000_g78702_i0reverse_frame_2 - 0.14 12.0 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 2 AAA_6 PF12774.7 NODE_86641_length_185_cov_1.180000_g78700_i0forward_frame_2 - 6.8e-32 110.7 0.6 7.2e-32 110.6 0.6 1.0 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_5 PF07728.14 NODE_86641_length_185_cov_1.180000_g78700_i0forward_frame_2 - 0.082 12.9 0.0 0.43 10.6 0.0 1.9 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) ATXN-1_C PF12547.8 NODE_86637_length_185_cov_1.200000_g78696_i0reverse_frame_3 - 4.7 7.6 10.7 7.9 6.9 4.3 2.5 1 1 1 2 2 2 0 Capicua transcriptional repressor modulator Gryzun-like PF12742.7 NODE_86636_length_185_cov_1.200000_g78695_i0reverse_frame_2 - 0.066 13.2 0.0 1.7 8.7 0.0 2.5 2 1 2 4 4 4 0 Gryzun, putative Golgi trafficking PQ-loop PF04193.14 NODE_86636_length_185_cov_1.200000_g78695_i0reverse_frame_2 - 5.7 6.8 10.0 12 5.8 0.5 3.0 1 1 2 3 3 3 0 PQ loop repeat 7tm_6 PF02949.20 NODE_86635_length_185_cov_1.206667_g78694_i0forward_frame_3 - 0.087 11.9 0.3 0.081 12.0 0.3 1.1 1 0 0 1 1 1 0 7tm Odorant receptor Vpu PF00558.19 NODE_86635_length_185_cov_1.206667_g78694_i0forward_frame_2 - 0.097 12.5 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Vpu protein DUF1181 PF06680.11 NODE_86635_length_185_cov_1.206667_g78694_i0forward_frame_2 - 0.17 11.7 1.5 0.23 11.3 1.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1181) PPR PF01535.20 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 3.6e-16 58.2 0.1 1.5e-07 31.2 0.1 2.1 2 0 0 2 2 2 2 PPR repeat PPR_1 PF12854.7 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 2.4e-15 55.9 0.3 2.1e-09 36.9 0.2 2.1 2 0 0 2 2 2 2 PPR repeat PPR_2 PF13041.6 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 2.2e-12 47.0 0.0 1.8e-05 24.8 0.0 2.0 2 0 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 5.5e-06 26.4 0.0 0.03 14.4 0.0 2.0 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR_long PF17177.4 NODE_86627_length_185_cov_1.233333_g78686_i0forward_frame_3 - 0.0056 16.1 0.0 0.0058 16.0 0.0 1.0 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP SYCP2_SLD PF18584.1 NODE_86622_length_185_cov_1.240000_g78681_i0reverse_frame_2 - 0.03 14.5 0.3 0.032 14.5 0.3 1.1 1 0 0 1 1 1 0 Synaptonemal complex 2 Spt16M-like domain Pox_A32 PF04665.12 NODE_86618_length_185_cov_1.246667_g78677_i0forward_frame_2 - 0.067 12.6 0.0 0.067 12.6 0.0 1.1 1 0 0 1 1 1 0 Poxvirus A32 protein TAF PF02969.17 NODE_86615_length_185_cov_1.253333_g78674_i0reverse_frame_3 - 0.055 13.6 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 TATA box binding protein associated factor (TAF) UPF0542 PF15086.6 NODE_86611_length_185_cov_1.266667_g78670_i0forward_frame_2 - 0.095 12.6 0.7 0.12 12.4 0.7 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 DUF4898 PF16239.5 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_3 - 0.015 15.2 0.4 0.018 14.9 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4898) Torus PF16131.5 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 2.5e-05 24.9 10.1 0.00029 21.5 3.4 2.1 1 1 1 2 2 2 2 Torus domain zf_CCCH_4 PF18345.1 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 5.9e-05 23.0 10.8 0.01 15.9 0.1 2.7 3 0 0 3 3 3 2 Zinc finger domain zf-CCCH PF00642.24 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 9.1e-05 22.3 12.1 0.045 13.7 0.4 2.9 2 1 1 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_3 PF15663.5 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 0.0048 17.1 5.2 0.12 12.6 1.7 2.0 1 1 1 2 2 2 2 Zinc-finger containing family zf-CCCH_4 PF18044.1 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 0.096 12.5 3.9 0.096 12.5 3.9 2.5 3 0 0 3 3 3 0 CCCH-type zinc finger mTERF PF02536.14 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 0.11 11.4 0.0 0.11 11.4 0.0 1.1 1 0 0 1 1 1 0 mTERF zf-CCCH_2 PF14608.6 NODE_86610_length_185_cov_1.266667_g78669_i0reverse_frame_2 - 9.2 6.9 12.9 20 5.9 1.0 2.7 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Stm1_N PF09598.10 NODE_86602_length_185_cov_1.306667_g78661_i0reverse_frame_3 - 3.9 8.4 17.3 1.3e+02 3.5 17.3 2.1 1 1 0 1 1 1 0 Stm1 7TM_GPCR_Srv PF10323.9 NODE_86600_length_185_cov_1.313333_g78659_i0reverse_frame_2 - 0.048 13.0 0.2 0.053 12.9 0.2 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srv ADAM_CR_2 PF17771.1 NODE_86595_length_185_cov_1.326667_g78654_i0forward_frame_3 - 0.021 15.3 1.7 0.022 15.2 1.7 1.1 1 0 0 1 1 1 0 ADAM cysteine-rich domain TMEM237 PF15383.6 NODE_86590_length_185_cov_1.326667_g78649_i0reverse_frame_3 - 0.058 12.5 0.8 0.063 12.4 0.8 1.0 1 0 0 1 1 1 0 Transmembrane protein 237 DUF962 PF06127.11 NODE_86590_length_185_cov_1.326667_g78649_i0reverse_frame_2 - 0.15 12.2 2.9 0.17 12.0 2.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) RICH PF05062.12 NODE_86590_length_185_cov_1.326667_g78649_i0forward_frame_2 - 0.016 15.5 1.5 0.021 15.1 1.5 1.2 1 0 0 1 1 1 0 RICH domain GBP PF02263.19 NODE_86589_length_185_cov_1.333333_g78648_i0reverse_frame_2 - 1.4e-08 34.4 0.0 1.6e-08 34.2 0.0 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain AAA_22 PF13401.6 NODE_86589_length_185_cov_1.333333_g78648_i0reverse_frame_2 - 0.049 13.9 0.0 0.052 13.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain MG3 PF17791.1 NODE_86589_length_185_cov_1.333333_g78648_i0reverse_frame_2 - 0.049 13.9 0.0 0.063 13.6 0.0 1.1 1 0 0 1 1 1 0 Macroglobulin domain MG3 Dynamin_N PF00350.23 NODE_86589_length_185_cov_1.333333_g78648_i0reverse_frame_2 - 0.15 12.1 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Dynamin family F-box_5 PF18511.1 NODE_86586_length_185_cov_1.333333_g78645_i0forward_frame_2 - 0.022 14.3 0.1 0.031 13.8 0.1 1.2 1 0 0 1 1 1 0 F-box SbsC_C PF18058.1 NODE_86586_length_185_cov_1.333333_g78645_i0forward_frame_2 - 0.058 13.6 0.1 0.067 13.4 0.1 1.0 1 0 0 1 1 1 0 SbsC C-terminal domain F-box-like PF12937.7 NODE_86586_length_185_cov_1.333333_g78645_i0forward_frame_2 - 0.23 11.4 0.0 0.27 11.1 0.0 1.1 1 0 0 1 1 1 0 F-box-like MFS_1 PF07690.16 NODE_86581_length_185_cov_1.333333_g78640_i0forward_frame_2 - 0.045 12.7 0.0 0.045 12.7 0.0 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily BT1 PF03092.16 NODE_86581_length_185_cov_1.333333_g78640_i0forward_frame_2 - 0.056 11.7 0.0 0.059 11.6 0.0 1.0 1 0 0 1 1 1 0 BT1 family Vps36-NZF-N PF16988.5 NODE_86580_length_185_cov_1.333333_g78639_i0reverse_frame_3 - 0.041 13.3 3.2 0.041 13.3 1.9 1.7 1 1 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-Sec23_Sec24 PF04810.15 NODE_86580_length_185_cov_1.333333_g78639_i0reverse_frame_3 - 0.053 13.6 0.4 0.086 12.9 0.4 1.4 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger Phage_int_SAM_3 PF14659.6 NODE_86579_length_185_cov_1.333333_g78638_i0forward_frame_2 - 0.019 15.2 0.1 0.028 14.7 0.1 1.3 1 0 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain Ribosomal_L34e PF01199.18 NODE_86574_length_185_cov_1.360000_g78633_i0reverse_frame_3 - 0.038 14.3 5.5 0.044 14.1 5.5 1.1 1 0 0 1 1 1 0 Ribosomal protein L34e DUF21 PF01595.20 NODE_86569_length_185_cov_1.380000_g78628_i0reverse_frame_3 - 0.0023 17.7 5.1 0.0038 17.0 5.1 1.4 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain PsbN PF02468.15 NODE_86569_length_185_cov_1.380000_g78628_i0reverse_frame_3 - 0.95 9.4 5.2 1.4 8.8 0.3 2.2 1 1 1 2 2 2 0 Photosystem II reaction centre N protein (psbN) DUF3270 PF11674.8 NODE_86568_length_185_cov_1.386667_g78627_i0forward_frame_2 - 0.049 13.8 0.8 0.054 13.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) Herpes_V23 PF01802.17 NODE_86567_length_185_cov_1.386667_g78626_i0reverse_frame_2 - 0.016 14.6 0.1 0.017 14.5 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus VP23 like capsid protein UPF0180 PF03698.13 NODE_86567_length_185_cov_1.386667_g78626_i0forward_frame_3 - 0.12 12.5 0.0 0.16 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) CarbpepA_inh PF02977.15 NODE_86563_length_185_cov_1.440000_g78622_i0reverse_frame_3 - 0.018 14.9 0.3 0.024 14.4 0.3 1.2 1 0 0 1 1 1 0 Carboxypeptidase A inhibitor WHAMM-JMY_N PF15920.5 NODE_86562_length_185_cov_1.446667_g78621_i0reverse_frame_2 - 0.18 11.7 7.2 2.5 8.0 0.3 2.8 1 1 2 3 3 3 0 N-terminal of Junction-mediating and WASP homolog-associated FAM176 PF14851.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_3 - 2.5 7.8 7.6 2.6 7.7 7.6 1.1 1 0 0 1 1 1 0 FAM176 family N-SET PF11764.8 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 0.048 13.8 3.4 0.05 13.7 3.4 1.1 1 0 0 1 1 1 0 COMPASS (Complex proteins associated with Set1p) component N Secretin_N_2 PF07655.13 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 0.1 13.1 14.8 0.12 13.0 14.8 1.1 1 0 0 1 1 1 0 Secretin N-terminal domain Lin-8 PF03353.15 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 1.2 8.7 5.8 1.2 8.6 5.8 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Treslin_N PF15292.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 1.9 6.7 11.4 2.3 6.5 11.4 1.0 1 0 0 1 1 1 0 Treslin N-terminus CCDC106 PF15794.5 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 2.9 7.5 9.1 3.1 7.5 9.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 PARM PF17061.5 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 6 6.9 23.9 6.4 6.8 23.9 1.0 1 0 0 1 1 1 0 PARM DUF4614 PF15391.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 6.3 6.8 17.1 6.1 6.8 17.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4614) NAM-associated PF14303.6 NODE_86559_length_185_cov_1.460000_g78618_i0reverse_frame_2 - 8.8 7.0 12.7 9.7 6.9 12.7 1.0 1 0 0 1 1 1 0 No apical meristem-associated C-terminal domain TMEM154 PF15102.6 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.0057 16.6 1.2 0.0067 16.3 1.2 1.2 1 0 0 1 1 1 1 TMEM154 protein family EphA2_TM PF14575.6 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.03 15.2 0.0 0.032 15.1 0.0 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain TRAP_alpha PF03896.16 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.049 12.8 3.9 0.051 12.8 3.9 1.0 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Conotoxin PF02950.17 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.058 14.4 4.6 0.13 13.3 4.6 1.8 1 1 0 1 1 1 0 Conotoxin CobT PF06213.12 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 0.082 12.3 5.1 0.082 12.3 5.1 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT RRN3 PF05327.11 NODE_86559_length_185_cov_1.460000_g78618_i0forward_frame_3 - 4.2 5.8 10.8 3.9 5.9 10.8 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Biotin_lipoyl PF00364.22 NODE_86557_length_185_cov_1.473333_g78616_i0reverse_frame_2 - 4.8e-18 64.8 1.8 5.1e-18 64.7 1.8 1.0 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 NODE_86557_length_185_cov_1.473333_g78616_i0reverse_frame_2 - 1.9e-05 24.4 1.4 0.0082 16.0 0.3 2.1 1 1 1 2 2 2 2 Biotin-lipoyl like GCV_H PF01597.19 NODE_86557_length_185_cov_1.473333_g78616_i0reverse_frame_2 - 4.4e-05 23.4 0.4 4.7e-05 23.3 0.4 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein RnfC_N PF13375.6 NODE_86557_length_185_cov_1.473333_g78616_i0reverse_frame_2 - 0.14 12.1 1.3 0.45 10.5 0.5 1.8 1 1 1 2 2 2 0 RnfC Barrel sandwich hybrid domain PAN_4 PF14295.6 NODE_86556_length_185_cov_1.486667_g78615_i0reverse_frame_2 - 0.071 13.0 2.1 0.093 12.7 2.1 1.2 1 0 0 1 1 1 0 PAN domain Vif PF00559.17 NODE_86554_length_185_cov_1.493333_g78613_i0reverse_frame_2 - 0.082 12.6 0.1 0.082 12.6 0.1 1.2 1 0 0 1 1 1 0 Retroviral Vif (Viral infectivity) protein TNF PF00229.18 NODE_86553_length_185_cov_1.493333_g78612_i0reverse_frame_3 - 0.086 12.8 0.0 0.086 12.8 0.0 1.1 1 0 0 1 1 1 0 TNF(Tumour Necrosis Factor) family Ion_trans PF00520.31 NODE_86551_length_185_cov_1.500000_g78610_i0reverse_frame_3 - 1.5 8.0 6.7 3.4 6.8 0.7 2.0 1 1 1 2 2 2 0 Ion transport protein IDH PF03971.14 NODE_86548_length_185_cov_1.506667_g78607_i0forward_frame_2 - 8.6e-19 67.5 0.1 9e-19 67.4 0.1 1.0 1 0 0 1 1 1 1 Monomeric isocitrate dehydrogenase RseC_MucC PF04246.12 NODE_86547_length_185_cov_1.513333_g78606_i0reverse_frame_2 - 0.084 12.8 0.3 0.094 12.7 0.3 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC GerE PF00196.19 NODE_86546_length_185_cov_1.513333_g78605_i0reverse_frame_3 - 0.045 13.3 0.0 0.064 12.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family RsgA_N PF16745.5 NODE_86542_length_185_cov_1.533333_g78601_i0reverse_frame_3 - 0.18 11.6 0.3 0.44 10.3 0.1 1.7 2 0 0 2 2 2 0 RsgA N-terminal domain CST-I PF06002.12 NODE_86537_length_185_cov_1.553333_g78596_i0reverse_frame_3 - 0.027 14.2 0.1 0.03 14.1 0.1 1.0 1 0 0 1 1 1 0 Alpha-2,3-sialyltransferase (CST-I) InaF-motif PF15018.6 NODE_86537_length_185_cov_1.553333_g78596_i0forward_frame_2 - 0.63 10.0 4.5 0.84 9.6 3.8 1.7 1 1 0 1 1 1 0 TRP-interacting helix F-box PF00646.33 NODE_86533_length_185_cov_1.566667_g78592_i0forward_frame_3 - 0.43 10.5 2.7 0.32 10.9 1.4 1.6 2 0 0 2 2 2 0 F-box domain Phospholip_A2_2 PF05826.12 NODE_86530_length_185_cov_1.573333_g78589_i0reverse_frame_3 - 0.014 15.6 0.9 0.016 15.4 0.9 1.1 1 0 0 1 1 1 0 Phospholipase A2 LRV_FeS PF05484.11 NODE_86530_length_185_cov_1.573333_g78589_i0reverse_frame_2 - 0.097 12.7 0.5 0.13 12.2 0.5 1.2 1 0 0 1 1 1 0 LRV protein FeS4 cluster Aa_trans PF01490.18 NODE_86523_length_185_cov_1.586667_g78582_i0forward_frame_2 - 0.00012 21.0 3.9 0.00012 21.0 3.9 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Reovirus_cap PF00979.17 NODE_86519_length_185_cov_1.593333_g78578_i0forward_frame_3 - 0.12 11.6 1.6 0.13 11.4 1.6 1.0 1 0 0 1 1 1 0 Reovirus outer capsid protein, Sigma 3 DUF962 PF06127.11 NODE_86516_length_185_cov_1.593333_g78575_i0forward_frame_2 - 0.058 13.5 3.7 0.068 13.3 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks450.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks450.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks450.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks450.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:37:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4817 PF16087.5 NODE_86513_length_185_cov_1.600000_g78572_i0reverse_frame_2 - 0.041 13.7 0.1 0.052 13.4 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain (DUF4817) zf-CGNR PF11706.8 NODE_86513_length_185_cov_1.600000_g78572_i0forward_frame_2 - 0.11 12.4 0.3 0.11 12.4 0.3 1.6 2 0 0 2 2 2 0 CGNR zinc finger BssC_TutF PF08201.11 NODE_86507_length_185_cov_1.600000_g78566_i0forward_frame_2 - 0.049 13.6 0.1 0.078 13.0 0.1 1.4 1 0 0 1 1 1 0 BssC/TutF protein RepA1_leader PF08048.12 NODE_86499_length_185_cov_1.600000_g78558_i0reverse_frame_3 - 0.013 15.8 1.5 0.023 14.9 1.5 1.4 1 0 0 1 1 1 0 Tap RepA1 leader peptide CnrY PF17524.2 NODE_86498_length_185_cov_1.600000_g78557_i0forward_frame_3 - 0.028 14.6 0.4 0.029 14.6 0.4 1.1 1 0 0 1 1 1 0 Anti-sigma factor CnrY DUF3844 PF12955.7 NODE_86498_length_185_cov_1.600000_g78557_i0forward_frame_3 - 0.23 11.6 4.7 0.25 11.5 4.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3844) DUF3372 PF11852.8 NODE_86498_length_185_cov_1.600000_g78557_i0forward_frame_2 - 0.083 12.4 0.0 0.083 12.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3372) Pkinase PF00069.25 NODE_86496_length_185_cov_1.600000_g78555_i0forward_frame_2 - 7.7e-16 58.2 0.0 7.7e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_86496_length_185_cov_1.600000_g78555_i0forward_frame_2 - 2.5e-06 27.0 0.0 3e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4108 PF13390.6 NODE_86495_length_185_cov_1.600000_g78554_i0reverse_frame_2 - 0.0038 17.2 0.4 0.0041 17.0 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF4108) Peptidase_M32 PF02074.15 NODE_86494_length_185_cov_1.606667_g78553_i0forward_frame_2 - 0.15 10.8 0.0 0.16 10.7 0.0 1.0 1 0 0 1 1 1 0 Carboxypeptidase Taq (M32) metallopeptidase ATP-synt_8 PF00895.20 NODE_86491_length_185_cov_1.620000_g78550_i0reverse_frame_2 - 0.08 13.4 0.8 0.1 13.0 0.8 1.2 1 0 0 1 1 1 0 ATP synthase protein 8 GUCT PF08152.12 NODE_86491_length_185_cov_1.620000_g78550_i0forward_frame_3 - 0.014 15.7 0.1 0.016 15.5 0.1 1.1 1 0 0 1 1 1 0 GUCT (NUC152) domain DNA_pol_B_exo1 PF03104.19 NODE_86487_length_185_cov_1.653333_g78546_i0reverse_frame_3 - 1e-13 51.2 0.3 1.1e-13 51.1 0.3 1.0 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain Fibrinogen_aC PF12160.8 NODE_86485_length_185_cov_1.673333_g78544_i0reverse_frame_2 - 0.034 14.0 1.0 0.047 13.5 1.0 1.2 1 0 0 1 1 1 0 Fibrinogen alpha C domain EMG1 PF03587.14 NODE_86485_length_185_cov_1.673333_g78544_i0forward_frame_3 - 0.065 12.9 0.8 0.072 12.7 0.8 1.0 1 0 0 1 1 1 0 EMG1/NEP1 methyltransferase TMEM71 PF15121.6 NODE_86485_length_185_cov_1.673333_g78544_i0forward_frame_2 - 0.48 10.1 4.1 0.54 9.9 4.1 1.2 1 0 0 1 1 1 0 TMEM71 protein family DUF3078 PF11276.8 NODE_86480_length_185_cov_1.693333_g78539_i0reverse_frame_3 - 0.082 13.4 0.1 0.098 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3078) Dicty_spore_N PF04562.12 NODE_86477_length_185_cov_1.713333_g78536_i0forward_frame_3 - 0.003 18.2 1.8 0.0033 18.1 1.8 1.1 1 0 0 1 1 1 1 Dictyostelium spore coat protein, N terminus YABBY PF04690.13 NODE_86472_length_185_cov_1.760000_g78531_i0reverse_frame_3 - 0.26 11.8 0.5 0.3 11.6 0.5 1.1 1 0 0 1 1 1 0 YABBY protein HBS1_N PF08938.10 NODE_86471_length_185_cov_1.760000_g78530_i0forward_frame_3 - 0.19 12.1 0.1 0.22 11.8 0.1 1.1 1 0 0 1 1 1 0 HBS1 N-terminus zinc_ribbon_9 PF14369.6 NODE_86469_length_185_cov_1.760000_g78528_i0reverse_frame_3 - 0.046 14.0 0.5 0.087 13.1 0.5 1.4 1 0 0 1 1 1 0 zinc-ribbon UPF0242 PF06785.11 NODE_86469_length_185_cov_1.760000_g78528_i0forward_frame_2 - 0.98 9.5 3.9 1 9.4 3.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus PhoR PF11808.8 NODE_86469_length_185_cov_1.760000_g78528_i0forward_frame_2 - 1.4 9.4 6.8 1.5 9.3 6.8 1.1 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR CCER1 PF15482.6 NODE_86467_length_185_cov_1.773333_g78526_i0forward_frame_2 - 0.017 15.1 0.6 0.017 15.1 0.6 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 BCMA-Tall_bind PF09257.10 NODE_86462_length_185_cov_1.806667_g78521_i0reverse_frame_3 - 0.14 12.3 1.2 0.26 11.4 1.2 1.4 1 0 0 1 1 1 0 BCMA, TALL-1 binding Cnn_1N PF07989.11 NODE_86460_length_185_cov_1.826667_g78519_i0reverse_frame_3 - 0.022 14.9 0.2 0.025 14.7 0.2 1.1 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 Pax7 PF12360.8 NODE_86458_length_185_cov_1.853333_g78517_i0forward_frame_2 - 0.11 12.7 1.0 0.75 10.0 0.2 2.0 2 0 0 2 2 2 0 Paired box protein 7 DUF948 PF06103.11 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.0058 16.9 1.6 0.0071 16.6 1.6 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) NPV_P10 PF05531.12 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.023 15.2 1.5 0.025 15.0 1.5 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein TolA_bind_tri PF16331.5 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.035 14.2 0.3 0.042 13.9 0.3 1.1 1 0 0 1 1 1 0 TolA binding protein trimerisation Anti-adapt_IraP PF10796.9 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.051 14.1 0.4 0.073 13.6 0.3 1.3 1 1 0 1 1 1 0 Sigma-S stabilisation anti-adaptor protein Bap31_Bap29_C PF18035.1 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.077 13.0 0.2 0.099 12.7 0.2 1.2 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain DOG1 PF14144.6 NODE_86455_length_185_cov_1.860000_g78514_i0forward_frame_2 - 0.09 13.0 0.2 0.11 12.8 0.2 1.2 1 0 0 1 1 1 0 Seed dormancy control RNaseH_like PF04308.12 NODE_86453_length_185_cov_1.866667_g78512_i0reverse_frame_3 - 0.076 12.9 0.0 0.077 12.9 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease H-like CYYR1 PF10873.8 NODE_86450_length_185_cov_1.893333_g78509_i0reverse_frame_3 - 0.15 12.5 0.7 0.15 12.5 0.7 1.1 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 ATE_C PF04377.15 NODE_86447_length_185_cov_1.913333_g78506_i0forward_frame_3 - 2.6e-15 57.2 2.9 2.8e-15 57.1 2.9 1.0 1 0 0 1 1 1 1 Arginine-tRNA-protein transferase, C terminus GPAT_N PF14829.6 NODE_86441_length_185_cov_1.966667_g78500_i0reverse_frame_2 - 0.041 13.9 0.0 0.05 13.6 0.0 1.1 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase N-terminal DUF5536 PF17688.1 NODE_86440_length_185_cov_1.973333_g78499_i0reverse_frame_3 - 0.14 12.0 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5536) VitD-bind_III PF09164.10 NODE_86440_length_185_cov_1.973333_g78499_i0forward_frame_2 - 0.016 15.2 0.1 0.027 14.5 0.1 1.4 1 1 0 1 1 1 0 Vitamin D binding protein, domain III Ribosomal_S8 PF00410.19 NODE_86431_length_185_cov_2.066667_g78490_i0reverse_frame_3 - 0.0072 16.3 0.1 0.011 15.7 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 NODE_86431_length_185_cov_2.066667_g78490_i0reverse_frame_2 - 2.2e-12 46.6 0.2 3e-12 46.1 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e HTH_17 PF12728.7 NODE_86431_length_185_cov_2.066667_g78490_i0reverse_frame_2 - 0.071 13.3 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain PMP22_Claudin PF00822.20 NODE_86426_length_185_cov_2.113333_g78485_i0reverse_frame_3 - 5.7e-05 23.1 1.2 6.1e-05 23.0 1.2 1.1 1 0 0 1 1 1 1 PMP-22/EMP/MP20/Claudin family Tektin PF03148.14 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.00056 18.8 3.2 0.00056 18.8 3.2 1.0 1 0 0 1 1 1 1 Tektin family Troponin PF00992.20 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.0018 18.6 4.6 0.0019 18.5 4.6 1.0 1 0 0 1 1 1 1 Troponin DivIC PF04977.15 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.014 15.2 5.9 0.39 10.5 2.1 2.0 1 1 1 2 2 2 0 Septum formation initiator Prefoldin_2 PF01920.20 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.015 15.3 4.1 0.023 14.6 4.1 1.4 1 1 0 1 1 1 0 Prefoldin subunit DUF1319 PF07028.11 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.017 15.4 4.3 0.048 13.9 4.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1319) PI3K_P85_iSH2 PF16454.5 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.017 14.7 4.8 0.019 14.6 4.8 1.0 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Pox_A_type_inc PF04508.12 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.019 14.8 3.2 0.2 11.5 0.8 3.1 3 1 0 3 3 3 0 Viral A-type inclusion protein repeat APG6_N PF17675.1 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.03 14.9 3.6 0.034 14.7 3.6 1.0 1 0 0 1 1 1 0 Apg6 coiled-coil region Bacillus_HBL PF05791.11 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.035 13.9 2.8 0.038 13.8 2.8 1.0 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) NleF_casp_inhib PF16809.5 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_3 - 0.072 13.0 4.3 0.075 12.9 4.3 1.0 1 0 0 1 1 1 0 NleF caspase inhibitor Nepo_coat_N PF03689.15 NODE_86426_length_185_cov_2.113333_g78485_i0forward_frame_2 - 0.078 12.9 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain Ribosomal_L33 PF00471.20 NODE_86425_length_185_cov_2.113333_g78484_i0forward_frame_2 - 0.084 13.3 0.1 0.084 13.3 0.1 1.5 2 0 0 2 2 2 0 Ribosomal protein L33 zf-CCCH_4 PF18044.1 NODE_86424_length_185_cov_2.120000_g78483_i0reverse_frame_2 - 0.049 13.4 0.6 0.59 10.0 0.0 2.4 3 0 0 3 3 3 0 CCCH-type zinc finger Croc_4 PF17691.1 NODE_86422_length_185_cov_2.120000_g78481_i0forward_frame_3 - 0.057 13.5 1.8 0.06 13.4 1.8 1.0 1 0 0 1 1 1 0 Contingent replication of cDNA 4 SNF2_N PF00176.23 NODE_86416_length_185_cov_2.133333_g78475_i0forward_frame_3 - 5.7e-09 35.2 0.2 5.9e-09 35.1 0.2 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain Ribosomal_L21e PF01157.18 NODE_86412_length_185_cov_2.140000_g78471_i0forward_frame_3 - 0.099 12.5 0.0 0.099 12.5 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L21e Pal1 PF08316.11 NODE_86409_length_185_cov_2.153333_g78468_i0forward_frame_3 - 0.21 12.3 0.9 0.28 11.9 0.9 1.2 1 0 0 1 1 1 0 Pal1 cell morphology protein NUC173 PF08161.12 NODE_86407_length_185_cov_2.160000_g78466_i0reverse_frame_2 - 0.0095 15.6 0.2 0.0095 15.6 0.2 1.0 1 0 0 1 1 1 1 NUC173 domain FerA PF08165.11 NODE_86407_length_185_cov_2.160000_g78466_i0forward_frame_2 - 0.14 12.1 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 FerA (NUC095) domain UCR_UQCRX_QCR9 PF05365.12 NODE_86407_length_185_cov_2.160000_g78466_i0forward_frame_2 - 0.25 11.3 0.0 0.33 10.9 0.0 1.1 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like DUF4778 PF16008.5 NODE_86402_length_185_cov_2.200000_g78461_i0reverse_frame_3 - 0.2 11.7 0.4 0.22 11.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4778) WD40_3 PF15911.5 NODE_86399_length_185_cov_2.233333_g78458_i0reverse_frame_2 - 0.12 12.4 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 WD domain, G-beta repeat PHD_4 PF16866.5 NODE_86397_length_185_cov_2.260000_g78456_i0forward_frame_2 - 0.0063 16.6 0.6 0.0076 16.3 0.6 1.1 1 0 0 1 1 1 1 PHD-finger DUF1304 PF06993.12 NODE_86395_length_185_cov_2.266667_g78454_i0forward_frame_3 - 0.17 11.9 0.1 0.19 11.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1304) MerB PF03243.15 NODE_86393_length_185_cov_2.280000_g78452_i0forward_frame_2 - 6.9 6.8 7.6 11 6.1 4.5 1.9 1 1 1 2 2 2 0 Alkylmercury lyase DUF4726 PF15855.5 NODE_86392_length_185_cov_2.293333_g78451_i0reverse_frame_3 - 0.13 12.5 0.1 0.14 12.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) CAP_N PF01213.19 NODE_86392_length_185_cov_2.293333_g78451_i0reverse_frame_2 - 1.6 8.2 3.0 1.5 8.3 3.0 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF334 PF03904.13 NODE_86388_length_185_cov_2.313333_g78447_i0reverse_frame_2 - 0.032 13.8 0.2 0.036 13.6 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF334) DUF4413 PF14372.6 NODE_86384_length_185_cov_2.380000_g78443_i0reverse_frame_3 - 0.11 12.9 0.0 0.11 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4413) DUF3602 PF12223.8 NODE_86383_length_185_cov_2.393333_g78442_i0forward_frame_3 - 0.056 14.0 0.5 0.067 13.8 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3602) UPF0176_N PF17773.1 NODE_86381_length_185_cov_2.393333_g78440_i0forward_frame_3 - 0.0012 19.1 0.1 0.0017 18.7 0.1 1.2 1 0 0 1 1 1 1 UPF0176 acylphosphatase like domain Sugar_tr PF00083.24 NODE_86378_length_185_cov_2.426667_g78437_i0reverse_frame_3 - 3.5e-09 36.1 7.7 3.6e-09 36.0 7.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_86378_length_185_cov_2.426667_g78437_i0reverse_frame_3 - 0.0027 16.7 7.8 0.0027 16.7 7.8 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3915 PF13054.6 NODE_86377_length_185_cov_2.433333_g78436_i0forward_frame_2 - 0.077 13.0 7.9 0.088 12.8 7.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) zf-met2 PF12907.7 NODE_86377_length_185_cov_2.433333_g78436_i0forward_frame_2 - 0.16 12.1 1.2 0.38 10.9 1.2 1.7 1 1 0 1 1 1 0 Zinc-binding Atrophin-1 PF03154.15 NODE_86377_length_185_cov_2.433333_g78436_i0forward_frame_2 - 0.29 9.4 4.2 0.28 9.4 4.2 1.0 1 0 0 1 1 1 0 Atrophin-1 family tRNA_SAD PF07973.14 NODE_86376_length_185_cov_2.466667_g78435_i0reverse_frame_2 - 0.14 12.3 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Threonyl and Alanyl tRNA synthetase second additional domain AnfG_VnfG PF03139.15 NODE_86375_length_185_cov_2.480000_g78434_i0forward_frame_3 - 0.022 14.9 0.2 0.024 14.8 0.2 1.1 1 0 0 1 1 1 0 Vanadium/alternative nitrogenase delta subunit Vps53_N PF04100.12 NODE_86369_length_185_cov_2.586667_g78428_i0forward_frame_2 - 7.1e-11 41.7 0.0 7.8e-11 41.6 0.0 1.0 1 0 0 1 1 1 1 Vps53-like, N-terminal HofP PF10748.9 NODE_86369_length_185_cov_2.586667_g78428_i0forward_frame_2 - 0.068 12.7 0.0 0.08 12.5 0.0 1.1 1 0 0 1 1 1 0 DNA utilization proteins HofP HEAT_2 PF13646.6 NODE_86365_length_185_cov_2.646667_g78424_i0forward_frame_2 - 0.016 15.6 0.0 0.019 15.4 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats TMIE PF16038.5 NODE_86359_length_185_cov_2.840000_g78418_i0reverse_frame_2 - 0.19 11.6 2.7 0.29 11.0 2.7 1.3 1 0 0 1 1 1 0 TMIE protein DUF4713 PF15831.5 NODE_86359_length_185_cov_2.840000_g78418_i0reverse_frame_2 - 1.3 9.5 5.9 1.6 9.2 3.6 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4713) SRTM1 PF15872.5 NODE_86354_length_185_cov_3.046667_g78413_i0reverse_frame_2 - 0.15 12.3 0.6 0.16 12.2 0.6 1.1 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 IGFBP PF00219.18 NODE_86353_length_185_cov_3.093333_g78412_i0reverse_frame_2 - 0.011 16.4 5.7 0.017 15.7 5.7 1.6 1 1 0 1 1 1 0 Insulin-like growth factor binding protein DUF3669 PF12417.8 NODE_86353_length_185_cov_3.093333_g78412_i0reverse_frame_2 - 0.12 12.6 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Zinc finger protein DUF282 PF03380.14 NODE_86349_length_185_cov_3.340000_g78408_i0reverse_frame_3 - 0.01 15.7 0.7 0.01 15.7 0.7 1.6 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF282 2OG-FeII_Oxy_3 PF13640.6 NODE_86344_length_185_cov_3.646667_g78403_i0forward_frame_2 - 0.065 14.1 0.0 0.078 13.9 0.0 1.2 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily EGF PF00008.27 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_2 - 0.0013 19.0 7.1 2.7 8.4 0.1 3.1 3 0 0 3 3 3 3 EGF-like domain Tme5_EGF_like PF09064.10 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_2 - 0.067 13.1 5.7 3.6 7.6 0.0 3.1 3 0 0 3 3 3 0 Thrombomodulin like fifth domain, EGF-like FXa_inhibition PF14670.6 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_2 - 0.16 12.3 11.4 4.9 7.5 0.4 3.1 1 1 2 3 3 3 0 Coagulation Factor Xa inhibitory site Tcell_CD4_C PF12104.8 NODE_86341_length_185_cov_4.406667_g78400_i0reverse_frame_2 - 0.95 9.4 10.9 1.6 8.7 0.3 3.2 3 0 0 3 3 3 0 T cell CD4 receptor C terminal region zf-C3HC4_2 PF13923.6 NODE_86341_length_185_cov_4.406667_g78400_i0forward_frame_3 - 0.76 9.7 11.3 5.4 6.9 1.0 3.1 1 1 2 3 3 3 0 Zinc finger, C3HC4 type (RING finger) Phage_integrase PF00589.22 NODE_86339_length_185_cov_5.226667_g78398_i0reverse_frame_3 - 0.00011 22.0 0.1 0.00014 21.7 0.1 1.1 1 0 0 1 1 1 1 Phage integrase family Arteri_Gl PF00951.18 NODE_86338_length_185_cov_5.353333_g78397_i0reverse_frame_3 - 9.6 6.0 15.2 9.9 5.9 15.2 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein Peptidase_C1 PF00112.23 NODE_86337_length_185_cov_6.133333_g78396_i0reverse_frame_3 - 2.9e-06 27.5 2.5 3.1e-06 27.4 2.5 1.0 1 0 0 1 1 1 1 Papain family cysteine protease DUF3377 PF11857.8 NODE_86336_length_185_cov_8.293333_g78395_i0forward_frame_3 - 0.63 10.0 2.8 0.85 9.6 2.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) DUF2798 PF11391.8 NODE_86336_length_185_cov_8.293333_g78395_i0forward_frame_2 - 0.029 14.4 4.0 0.037 14.1 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2798) MNSV_P7B PF06692.11 NODE_86336_length_185_cov_8.293333_g78395_i0forward_frame_2 - 5.3 7.1 7.5 1 9.4 0.6 2.2 1 1 1 2 2 2 0 Melon necrotic spot virus P7B protein zf-LITAF-like PF10601.9 NODE_86328_length_185_cov_22.020000_g78387_i0forward_frame_2 - 0.045 14.0 0.2 0.066 13.5 0.2 1.3 1 1 0 1 1 1 0 LITAF-like zinc ribbon domain LELP1 PF15042.6 NODE_86326_length_185_cov_23.580000_g78385_i0forward_frame_2 - 0.007 16.8 1.7 0.0074 16.7 1.7 1.1 1 0 0 1 1 1 1 Late cornified envelope-like proline-rich protein 1 Resistin PF06954.11 NODE_86326_length_185_cov_23.580000_g78385_i0forward_frame_2 - 0.097 13.2 6.0 0.11 13.1 6.0 1.1 1 0 0 1 1 1 0 Resistin Cyclotide PF03784.13 NODE_86326_length_185_cov_23.580000_g78385_i0forward_frame_2 - 0.32 11.1 5.5 1.2 9.3 5.5 1.9 1 1 0 1 1 1 0 Cyclotide family DUF2663 PF10864.8 NODE_86324_length_185_cov_25.353333_g78383_i0reverse_frame_2 - 0.82 10.1 3.7 0.88 10.0 3.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) SPC12 PF06645.13 NODE_86324_length_185_cov_25.353333_g78383_i0reverse_frame_2 - 1.7 8.8 6.1 3.5 7.8 4.5 1.9 1 1 1 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) SieB PF14163.6 NODE_86324_length_185_cov_25.353333_g78383_i0reverse_frame_2 - 6.5 6.2 9.3 67 3.0 9.3 1.9 1 1 0 1 1 1 0 Super-infection exclusion protein B DUF4304 PF14137.6 NODE_86324_length_185_cov_25.353333_g78383_i0forward_frame_3 - 0.061 13.5 0.9 0.07 13.3 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4304) Baculo_PP31 PF05311.11 NODE_86321_length_185_cov_26.320000_g78380_i0reverse_frame_2 - 0.00019 21.1 5.8 0.00021 20.9 5.8 1.0 1 0 0 1 1 1 1 Baculovirus 33KDa late protein (PP31) Phage_term_sma PF07141.11 NODE_86320_length_185_cov_26.966667_g78379_i0forward_frame_3 - 0.096 12.5 0.1 0.11 12.2 0.1 1.0 1 0 0 1 1 1 0 Putative bacteriophage terminase small subunit Zn_ribbon_SprT PF17283.2 NODE_86316_length_185_cov_32.066667_g78375_i0forward_frame_3 - 0.096 12.6 2.1 0.12 12.3 2.1 1.1 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Ribosomal_L37ae PF01780.19 NODE_86316_length_185_cov_32.066667_g78375_i0forward_frame_2 - 0.042 13.9 0.2 0.047 13.8 0.2 1.1 1 0 0 1 1 1 0 Ribosomal L37ae protein family TMIE PF16038.5 NODE_86308_length_185_cov_37.293333_g78367_i0reverse_frame_3 - 0.99 9.3 4.6 0.31 10.9 1.9 1.6 1 1 1 2 2 2 0 TMIE protein DUF5522 PF17653.1 NODE_86306_length_185_cov_38.533333_g78365_i0reverse_frame_2 - 5.9e-05 22.9 9.1 8.5e-05 22.4 9.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5522) NTP_transf_3 PF12804.7 NODE_86302_length_185_cov_40.233333_g78361_i0reverse_frame_2 - 0.076 13.4 0.1 0.085 13.2 0.1 1.0 1 0 0 1 1 1 0 MobA-like NTP transferase domain NSP2_assoc PF14758.6 NODE_86301_length_185_cov_40.466667_g78360_i0reverse_frame_2 - 0.045 14.1 0.1 0.047 14.0 0.1 1.0 1 0 0 1 1 1 0 Non-essential region of nsp2 of arterivirus polyprotein LPAM_2 PF13627.6 NODE_86299_length_185_cov_41.106667_g78358_i0reverse_frame_3 - 0.088 12.7 0.5 0.14 12.0 0.5 1.3 1 0 0 1 1 1 0 Prokaryotic lipoprotein-attachment site Histone_H2A_C PF16211.5 NODE_86293_length_185_cov_45.400000_g78352_i0forward_frame_3 - 0.78 9.5 3.4 1.1 9.0 3.4 1.3 1 0 0 1 1 1 0 C-terminus of histone H2A Ketoacyl-synt_2 PF13723.6 NODE_86292_length_185_cov_47.493333_g78351_i0reverse_frame_2 - 0.043 13.4 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 Beta-ketoacyl synthase, N-terminal domain KA1 PF02149.19 NODE_86284_length_185_cov_62.253333_g78343_i0reverse_frame_3 - 0.13 12.1 0.1 0.19 11.5 0.1 1.2 1 0 0 1 1 1 0 Kinase associated domain 1 CDC48_N PF02359.18 NODE_86284_length_185_cov_62.253333_g78343_i0reverse_frame_2 - 0.16 12.1 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Mvb12 PF09452.10 NODE_86281_length_185_cov_64.880000_g78340_i0reverse_frame_2 - 0.051 14.0 0.1 0.051 14.0 0.1 1.1 1 0 0 1 1 1 0 ESCRT-I subunit Mvb12 APC1_C PF18122.1 NODE_86280_length_185_cov_65.200000_g78339_i0forward_frame_2 - 0.029 14.3 0.5 0.032 14.2 0.5 1.1 1 0 0 1 1 1 0 Anaphase-promoting complex sub unit 1 C-terminal domain Filament PF00038.21 NODE_86279_length_185_cov_65.766667_g78338_i0forward_frame_3 - 0.0015 18.2 1.6 0.0017 18.0 1.6 1.2 1 0 0 1 1 1 1 Intermediate filament protein Tup_N PF08581.10 NODE_86279_length_185_cov_65.766667_g78338_i0forward_frame_3 - 0.09 13.1 4.3 0.063 13.6 2.0 1.8 1 1 1 2 2 2 0 Tup N-terminal DUF1936 PF09151.10 NODE_86275_length_185_cov_68.993333_g78334_i0forward_frame_3 - 0.11 12.4 0.2 0.17 11.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1936) Zn-ribbon_8 PF09723.10 NODE_86275_length_185_cov_68.993333_g78334_i0forward_frame_3 - 0.14 12.3 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Zinc ribbon domain SUR7 PF06687.12 NODE_86260_length_185_cov_101.713333_g78319_i0reverse_frame_3 - 7.8 6.1 12.5 8.1 6.0 12.5 1.0 1 0 0 1 1 1 0 SUR7/PalI family SR-25 PF10500.9 NODE_86260_length_185_cov_101.713333_g78319_i0forward_frame_3 - 0.52 9.9 8.8 0.52 9.9 8.8 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein ETRAMP PF09716.10 NODE_86260_length_185_cov_101.713333_g78319_i0forward_frame_3 - 1.3 9.1 12.4 1.7 8.8 12.4 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) SR-25 PF10500.9 NODE_86260_length_185_cov_101.713333_g78319_i0forward_frame_2 - 0.12 12.0 10.6 0.13 11.9 10.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF995 PF06191.12 NODE_86256_length_185_cov_149.500000_g78315_i0reverse_frame_3 - 0.16 11.7 0.0 0.19 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF995) Cellulase-like PF12876.7 NODE_86255_length_185_cov_157.740000_g78314_i0reverse_frame_2 - 0.1 11.9 0.2 0.12 11.7 0.2 1.0 1 0 0 1 1 1 0 Sugar-binding cellulase-like DUF390 PF04094.14 NODE_86249_length_185_cov_259.946667_g78308_i0forward_frame_3 - 0.053 11.8 0.9 0.046 12.0 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF390) NACHT_sigma PF17106.5 NODE_86242_length_185_cov_8124.893333_g78301_i0forward_frame_3 - 0.0022 18.1 0.4 0.0034 17.5 0.4 1.3 1 0 0 1 1 1 1 Sigma domain on NACHT-NTPases DUF2949 PF11165.8 NODE_86238_length_185_cov_704310.873333_g78297_i0reverse_frame_3 - 0.1 12.9 0.3 0.23 11.8 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2949) T_cell_tran_alt PF15128.6 NODE_86238_length_185_cov_704310.873333_g78297_i0forward_frame_2 - 0.12 12.2 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 T-cell leukemia translocation-altered Peptidase_C8 PF03569.13 NODE_86235_length_186_cov_0.841060_g78294_i0reverse_frame_2 - 0.033 13.7 0.0 0.038 13.5 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C8 DUF2650 PF10853.8 NODE_86235_length_186_cov_0.841060_g78294_i0forward_frame_2 - 0.22 11.3 4.6 0.35 10.6 4.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2650) MARVEL PF01284.23 NODE_86233_length_186_cov_0.854305_g78292_i0reverse_frame_3 - 0.028 14.4 1.9 0.032 14.3 1.9 1.0 1 0 0 1 1 1 0 Membrane-associating domain DUF865 PF05906.11 NODE_86223_length_186_cov_0.940397_g78282_i0reverse_frame_2 - 0.2 11.4 1.4 0.41 10.5 1.4 1.5 1 0 0 1 1 1 0 Herpesvirus-7 repeat of unknown function (DUF865) Lamprin PF06403.11 NODE_86221_length_186_cov_0.947020_g78280_i0reverse_frame_3 - 0.3 11.1 2.4 1.4 8.9 2.4 1.8 1 1 0 1 1 1 0 Lamprin BRK PF07533.16 NODE_86220_length_186_cov_0.960265_g78279_i0forward_frame_3 - 0.16 11.7 0.0 0.25 11.0 0.0 1.3 1 0 0 1 1 1 0 BRK domain FAP PF07174.11 NODE_86218_length_186_cov_0.973510_g78277_i0reverse_frame_3 - 8.9 5.7 18.6 10 5.4 18.6 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Lamprin PF06403.11 NODE_86218_length_186_cov_0.973510_g78277_i0forward_frame_3 - 0.55 10.2 7.1 0.62 10.0 7.1 1.1 1 0 0 1 1 1 0 Lamprin Spindle_Spc25 PF08234.12 NODE_86217_length_186_cov_0.973510_g78276_i0reverse_frame_2 - 0.087 13.0 0.3 0.13 12.5 0.3 1.3 1 1 0 1 1 1 0 Chromosome segregation protein Spc25 zf-PARP PF00645.18 NODE_86214_length_186_cov_0.986755_g78273_i0reverse_frame_3 - 0.067 14.1 0.2 0.08 13.8 0.2 1.1 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region DUF5540 PF17694.1 NODE_86213_length_186_cov_0.993377_g78272_i0forward_frame_3 - 0.044 14.3 0.6 11 6.6 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5540) DUF3944 PF13099.6 NODE_86211_length_186_cov_0.993377_g78270_i0reverse_frame_3 - 0.1 12.5 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3944) Fer4_6 PF12837.7 NODE_86210_length_186_cov_1.006623_g78269_i0reverse_frame_2 - 0.84 9.8 5.6 1.5 9.0 1.3 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 NODE_86210_length_186_cov_1.006623_g78269_i0reverse_frame_2 - 0.89 9.8 5.7 2.3 8.5 0.8 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain SWIRM-assoc_2 PF16496.5 NODE_86200_length_186_cov_1.033113_g78259_i0reverse_frame_2 - 0.16 10.8 0.0 0.16 10.8 0.0 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal Peptidase_C33 PF05412.12 NODE_86198_length_186_cov_1.039735_g78257_i0reverse_frame_2 - 0.12 12.4 0.0 0.15 12.1 0.0 1.0 1 0 0 1 1 1 0 Equine arterivirus Nsp2-type cysteine proteinase IrmA PF18673.1 NODE_86176_length_186_cov_1.052980_g78235_i0reverse_frame_3 - 0.0069 16.5 0.2 0.0074 16.4 0.2 1.0 1 0 0 1 1 1 1 interleukin receptor mimic protein A CadC_C1 PF18500.1 NODE_86176_length_186_cov_1.052980_g78235_i0reverse_frame_3 - 0.046 13.9 0.1 0.046 13.9 0.1 1.1 1 0 0 1 1 1 0 CadC C-terminal domain 1 Malt_amylase_C PF16657.5 NODE_86172_length_186_cov_1.052980_g78231_i0forward_frame_2 - 0.012 15.8 0.0 0.015 15.4 0.0 1.2 1 0 0 1 1 1 0 Maltogenic Amylase, C-terminal domain YedD PF13987.6 NODE_86169_length_186_cov_1.059603_g78228_i0forward_frame_2 - 0.15 11.9 0.0 0.16 11.8 0.0 1.0 1 0 0 1 1 1 0 YedD-like protein BTRD1 PF17660.1 NODE_86165_length_186_cov_1.059603_g78224_i0reverse_frame_2 - 0.08 12.8 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 Bacterial tandem repeat domain 1 CD225 PF04505.12 NODE_86159_length_186_cov_1.059603_g78218_i0forward_frame_3 - 0.055 13.6 0.5 0.055 13.6 0.5 1.7 2 0 0 2 2 2 0 Interferon-induced transmembrane protein TIP_N PF12457.8 NODE_86158_length_186_cov_1.059603_g78217_i0reverse_frame_2 - 0.069 13.5 0.9 0.074 13.4 0.9 1.1 1 0 0 1 1 1 0 Tuftelin interacting protein N terminal zf-RING_5 PF14634.6 NODE_86155_length_186_cov_1.059603_g78214_i0reverse_frame_3 - 0.19 11.7 1.3 0.27 11.2 1.3 1.5 1 1 0 1 1 1 0 zinc-RING finger domain Musclin PF11037.8 NODE_86155_length_186_cov_1.059603_g78214_i0forward_frame_3 - 0.092 12.7 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Insulin-resistance promoting peptide in skeletal muscle Cyd_oper_YbgE PF09600.10 NODE_86155_length_186_cov_1.059603_g78214_i0forward_frame_2 - 0.17 12.2 0.7 0.3 11.5 0.3 1.6 2 0 0 2 2 2 0 Cyd operon protein YbgE (Cyd_oper_YbgE) Connexin43 PF03508.13 NODE_86154_length_186_cov_1.059603_g78213_i0reverse_frame_3 - 0.035 13.6 3.2 0.063 12.8 3.2 1.4 1 0 0 1 1 1 0 Gap junction alpha-1 protein (Cx43) Ornatin PF02088.15 NODE_86153_length_186_cov_1.059603_g78212_i0forward_frame_2 - 0.031 14.1 0.2 0.031 14.1 0.2 1.7 2 0 0 2 2 2 0 Ornatin FAP PF07174.11 NODE_86152_length_186_cov_1.059603_g78211_i0forward_frame_3 - 0.89 8.9 10.0 0.95 8.9 10.0 1.0 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DUF5321 PF17254.2 NODE_86148_length_186_cov_1.059603_g78207_i0reverse_frame_3 - 0.068 12.6 0.0 0.068 12.6 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5321) DUF5090 PF17009.5 NODE_86142_length_186_cov_1.059603_g78201_i0reverse_frame_3 - 0.41 10.6 6.9 0.44 10.5 6.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF3270 PF11674.8 NODE_86142_length_186_cov_1.059603_g78201_i0reverse_frame_2 - 0.054 13.7 1.5 0.067 13.4 0.4 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3270) Cir_Bir_Yir PF06022.11 NODE_86142_length_186_cov_1.059603_g78201_i0forward_frame_2 - 0.023 14.2 1.0 0.025 14.1 1.0 1.0 1 0 0 1 1 1 0 Plasmodium variant antigen protein Cir/Yir/Bir DUF4357 PF14267.6 NODE_86138_length_186_cov_1.059603_g78197_i0reverse_frame_2 - 0.18 11.8 0.3 0.26 11.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4357) Chlam_PMP PF02415.17 NODE_86136_length_186_cov_1.059603_g78195_i0forward_frame_3 - 0.00091 19.6 2.0 1 10.0 0.3 2.5 2 1 0 2 2 2 2 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat ACT PF01842.25 NODE_86132_length_186_cov_1.059603_g78191_i0forward_frame_2 - 0.024 14.4 0.0 0.041 13.7 0.0 1.3 1 0 0 1 1 1 0 ACT domain Phage_T4_gp36 PF03903.13 NODE_86126_length_186_cov_1.059603_g78185_i0reverse_frame_3 - 0.025 14.6 0.0 0.025 14.5 0.0 1.1 1 0 0 1 1 1 0 Phage T4 tail fibre APP_N PF02177.16 NODE_86123_length_186_cov_1.059603_g78182_i0forward_frame_2 - 0.058 13.8 0.2 0.059 13.7 0.2 1.1 1 0 0 1 1 1 0 Amyloid A4 N-terminal heparin-binding Ank_4 PF13637.6 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 8.8e-10 38.9 0.1 2.3e-06 28.0 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 3.9e-09 36.6 0.2 3.5e-07 30.4 0.0 1.9 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 9e-09 35.8 0.0 1e-08 35.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 4.6e-07 30.0 0.1 7.9e-05 22.9 0.0 2.4 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 NODE_86121_length_186_cov_1.059603_g78180_i0reverse_frame_2 - 0.00023 21.3 0.0 0.014 15.8 0.0 2.3 2 0 0 2 2 2 1 Ankyrin repeat Cytochrom_B559 PF00283.19 NODE_86121_length_186_cov_1.059603_g78180_i0forward_frame_3 - 0.022 14.2 4.1 0.15 11.5 0.4 2.2 2 0 0 2 2 2 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits DUF2207 PF09972.9 NODE_86119_length_186_cov_1.059603_g78178_i0reverse_frame_3 - 8.4 5.0 9.4 8.4 5.0 9.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) NADHdh PF00146.21 NODE_86118_length_186_cov_1.059603_g78177_i0reverse_frame_2 - 5.7e-17 62.0 3.4 6e-17 61.9 3.4 1.0 1 0 0 1 1 1 1 NADH dehydrogenase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks451.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks451.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks451.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks451.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:35:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- BIR PF00653.21 NODE_86109_length_186_cov_1.059603_g78168_i0reverse_frame_2 - 0.011 16.3 0.1 0.014 16.0 0.1 1.2 1 0 0 1 1 1 0 Inhibitor of Apoptosis domain DUSP PF06337.12 NODE_86107_length_186_cov_1.059603_g78166_i0reverse_frame_3 - 0.043 14.4 0.2 0.043 14.4 0.2 1.1 1 0 0 1 1 1 0 DUSP domain VLPT PF07122.11 NODE_86102_length_186_cov_1.059603_g78161_i0forward_frame_2 - 0.1 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Variable length PCR target protein (VLPT) zinc_ribbon_10 PF10058.9 NODE_86101_length_186_cov_1.059603_g78160_i0forward_frame_3 - 0.015 15.0 0.1 0.04 13.6 0.1 1.7 1 1 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Spore_YabQ PF09578.10 NODE_86099_length_186_cov_1.066225_g78158_i0forward_frame_2 - 0.31 11.3 5.7 0.34 11.1 5.7 1.1 1 0 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) DUF5363 PF17320.2 NODE_86098_length_186_cov_1.066225_g78157_i0reverse_frame_3 - 0.062 13.2 0.1 0.1 12.5 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5363) Pyr_redox_2 PF07992.14 NODE_86093_length_186_cov_1.079470_g78152_i0reverse_frame_2 - 1e-10 41.3 0.0 1.1e-10 41.3 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_86093_length_186_cov_1.079470_g78152_i0reverse_frame_2 - 0.00019 21.9 0.2 0.00026 21.5 0.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 NODE_86093_length_186_cov_1.079470_g78152_i0reverse_frame_2 - 0.043 13.2 0.3 0.058 12.7 0.4 1.3 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 NODE_86093_length_186_cov_1.079470_g78152_i0reverse_frame_2 - 0.42 10.5 1.5 0.5 10.2 0.4 1.7 1 1 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain zf-RING_5 PF14634.6 NODE_86082_length_186_cov_1.119205_g78141_i0forward_frame_2 - 1.3 9.0 13.9 2.3 8.2 13.9 1.4 1 0 0 1 1 1 0 zinc-RING finger domain CID_GANP PF16766.5 NODE_86074_length_186_cov_1.152318_g78133_i0forward_frame_3 - 0.2 11.9 1.1 0.34 11.1 1.1 1.4 1 1 0 1 1 1 0 Binding region of GANP to ENY2 GP120 PF00516.18 NODE_86073_length_186_cov_1.158940_g78132_i0reverse_frame_3 - 0.037 12.6 0.1 0.038 12.6 0.1 1.0 1 0 0 1 1 1 0 Envelope glycoprotein GP120 ETRAMP PF09716.10 NODE_86066_length_186_cov_1.192053_g78125_i0reverse_frame_3 - 8.4 6.5 5.3 11 6.1 5.3 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Vif PF00559.17 NODE_86065_length_186_cov_1.198675_g78124_i0reverse_frame_3 - 0.05 13.3 0.1 0.055 13.2 0.1 1.0 1 0 0 1 1 1 0 Retroviral Vif (Viral infectivity) protein MSA-2c PF12238.8 NODE_86064_length_186_cov_1.198675_g78123_i0forward_frame_3 - 0.22 11.5 2.6 0.23 11.4 2.6 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c CBS PF00571.28 NODE_86062_length_186_cov_1.211921_g78121_i0reverse_frame_3 - 4e-08 33.6 0.0 4.4e-08 33.5 0.0 1.0 1 0 0 1 1 1 1 CBS domain SRF-TF PF00319.18 NODE_86062_length_186_cov_1.211921_g78121_i0forward_frame_3 - 0.076 12.5 0.5 2.5 7.7 0.0 2.2 2 0 0 2 2 2 0 SRF-type transcription factor (DNA-binding and dimerisation domain) DUF4596 PF15363.6 NODE_86062_length_186_cov_1.211921_g78121_i0forward_frame_3 - 0.55 10.5 4.5 0.82 9.9 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4596) SRCR_2 PF15494.6 NODE_86060_length_186_cov_1.211921_g78119_i0reverse_frame_2 - 0.12 13.0 0.1 0.15 12.6 0.1 1.3 1 1 0 1 1 1 0 Scavenger receptor cysteine-rich domain DUF4227 PF14004.6 NODE_86060_length_186_cov_1.211921_g78119_i0forward_frame_2 - 0.045 13.7 0.3 0.066 13.2 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) SOCS_box PF07525.16 NODE_86059_length_186_cov_1.211921_g78118_i0forward_frame_3 - 0.093 13.1 0.3 0.17 12.3 0.3 1.4 1 0 0 1 1 1 0 SOCS box SoPB_HTH PF18090.1 NODE_86059_length_186_cov_1.211921_g78118_i0forward_frame_3 - 0.1 12.7 0.0 0.12 12.5 0.0 1.2 1 0 0 1 1 1 0 Centromere-binding protein HTH domain TetR_C_11 PF16859.5 NODE_86058_length_186_cov_1.211921_g78117_i0forward_frame_2 - 0.014 15.7 0.2 0.021 15.2 0.2 1.4 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain HGWP PF03578.15 NODE_86050_length_186_cov_1.238411_g78109_i0forward_frame_2 - 0.13 11.8 1.3 0.13 11.8 1.3 2.0 2 0 0 2 2 2 0 HGWP repeat RNase_T PF00929.24 NODE_86049_length_186_cov_1.238411_g78108_i0reverse_frame_3 - 4.5e-08 33.8 0.0 4.7e-08 33.8 0.0 1.0 1 0 0 1 1 1 1 Exonuclease PORR PF11955.8 NODE_86046_length_186_cov_1.245033_g78105_i0forward_frame_2 - 0.036 13.0 0.1 0.036 13.0 0.1 1.0 1 0 0 1 1 1 0 Plant organelle RNA recognition domain DUF591 PF04569.14 NODE_86034_length_186_cov_1.278146_g78093_i0forward_frame_2 - 0.0014 18.7 1.5 0.0018 18.3 1.5 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF1958 PF09211.10 NODE_86031_length_186_cov_1.284768_g78090_i0reverse_frame_2 - 0.063 13.6 0.0 0.11 12.9 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1958) DUF3587 PF12132.8 NODE_86026_length_186_cov_1.298013_g78085_i0forward_frame_2 - 0.0091 15.5 0.3 0.0094 15.4 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3587) Mtp PF03821.16 NODE_86024_length_186_cov_1.304636_g78083_i0reverse_frame_3 - 4.4 6.8 6.5 4.4 6.8 6.5 1.0 1 0 0 1 1 1 0 Golgi 4-transmembrane spanning transporter Viral_Hsp90 PF03225.14 NODE_86024_length_186_cov_1.304636_g78083_i0reverse_frame_2 - 0.12 10.9 0.3 0.13 10.7 0.3 1.1 1 0 0 1 1 1 0 Viral heat shock protein Hsp90 homologue Toxin_18 PF08087.11 NODE_86022_length_186_cov_1.311258_g78081_i0forward_frame_3 - 0.038 14.0 0.1 0.038 14.0 0.1 2.0 2 0 0 2 2 2 0 Conotoxin O-superfamily TBCC PF07986.12 NODE_86020_length_186_cov_1.311258_g78079_i0reverse_frame_2 - 0.0071 16.1 0.7 0.0082 15.9 0.7 1.1 1 0 0 1 1 1 1 Tubulin binding cofactor C Fer2_4 PF13510.6 NODE_86020_length_186_cov_1.311258_g78079_i0reverse_frame_2 - 0.2 11.7 2.7 0.22 11.6 2.7 1.1 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain VESA1_N PF12785.7 NODE_86020_length_186_cov_1.311258_g78079_i0reverse_frame_2 - 1.9 7.4 6.4 1.8 7.4 6.4 1.0 1 0 0 1 1 1 0 Variant erythrocyte surface antigen-1 PPI_Ypi1 PF07491.11 NODE_86017_length_186_cov_1.317881_g78076_i0forward_frame_2 - 0.19 11.6 1.4 0.28 11.1 1.4 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor ANTAR PF03861.14 NODE_86013_length_186_cov_1.324503_g78072_i0forward_frame_2 - 0.021 14.7 0.0 0.027 14.3 0.0 1.2 1 0 0 1 1 1 0 ANTAR domain Pkinase PF00069.25 NODE_86010_length_186_cov_1.324503_g78069_i0reverse_frame_3 - 0.016 14.6 0.0 0.019 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein kinase domain Myotoxins PF00819.17 NODE_86006_length_186_cov_1.324503_g78065_i0reverse_frame_2 - 0.034 14.4 0.9 0.05 13.9 0.9 1.3 1 0 0 1 1 1 0 Myotoxin, crotamine Copper-fist PF00649.18 NODE_86006_length_186_cov_1.324503_g78065_i0forward_frame_3 - 0.1 12.1 0.3 0.1 12.1 0.3 1.7 2 0 0 2 2 2 0 Copper fist DNA binding domain TRP PF06011.12 NODE_86004_length_186_cov_1.331126_g78063_i0reverse_frame_2 - 0.0031 16.3 2.0 0.0036 16.1 2.0 1.0 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel GAGA_bind PF06217.12 NODE_86001_length_186_cov_1.350993_g78060_i0forward_frame_3 - 0.07 13.4 0.2 0.088 13.1 0.0 1.2 1 1 0 1 1 1 0 GAGA binding protein-like family Matrix PF00661.21 NODE_86001_length_186_cov_1.350993_g78060_i0forward_frame_2 - 0.087 11.5 0.0 0.096 11.4 0.0 1.0 1 0 0 1 1 1 0 Viral matrix protein Toxin_13 PF07822.11 NODE_85999_length_186_cov_1.364238_g78058_i0reverse_frame_2 - 0.2 11.8 7.4 0.75 10.0 6.1 2.0 1 1 1 2 2 2 0 Neurotoxin B-IV-like protein DUF2973 PF11189.8 NODE_85997_length_186_cov_1.377483_g78056_i0reverse_frame_3 - 0.0017 18.4 0.2 0.0024 17.9 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2973) DUF2162 PF09930.9 NODE_85997_length_186_cov_1.377483_g78056_i0reverse_frame_3 - 0.018 14.5 0.0 0.019 14.4 0.0 1.0 1 0 0 1 1 1 0 Predicted transporter (DUF2162) Tweety PF04906.13 NODE_85997_length_186_cov_1.377483_g78056_i0reverse_frame_3 - 0.018 13.8 0.3 0.018 13.7 0.3 1.0 1 0 0 1 1 1 0 Tweety VKOR PF07884.14 NODE_85997_length_186_cov_1.377483_g78056_i0reverse_frame_3 - 0.03 14.5 2.4 0.036 14.3 2.4 1.1 1 0 0 1 1 1 0 Vitamin K epoxide reductase family DUF4014 PF13198.6 NODE_85997_length_186_cov_1.377483_g78056_i0reverse_frame_3 - 0.039 14.3 0.2 0.048 14.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4014) DUF4485 PF14846.6 NODE_85995_length_186_cov_1.384106_g78054_i0reverse_frame_3 - 0.063 13.3 0.4 0.068 13.2 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4485) DUF1866 PF08952.11 NODE_85994_length_186_cov_1.390728_g78053_i0reverse_frame_2 - 0.17 11.7 0.1 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1866) DUF3474 PF11960.8 NODE_85994_length_186_cov_1.390728_g78053_i0forward_frame_2 - 0.062 13.5 1.4 0.075 13.2 1.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3474) V4R PF02830.18 NODE_85986_length_186_cov_1.410596_g78045_i0forward_frame_2 - 0.03 14.3 0.0 0.041 13.9 0.0 1.2 1 0 0 1 1 1 0 V4R domain GAGA PF09237.11 NODE_85984_length_186_cov_1.417219_g78043_i0forward_frame_2 - 0.0028 17.4 0.1 0.0038 17.0 0.1 1.1 1 0 0 1 1 1 1 GAGA factor PqiA PF04403.13 NODE_85984_length_186_cov_1.417219_g78043_i0forward_frame_2 - 0.0056 16.5 0.4 0.0062 16.4 0.4 1.1 1 0 0 1 1 1 1 Paraquat-inducible protein A zf-FPG_IleRS PF06827.14 NODE_85984_length_186_cov_1.417219_g78043_i0forward_frame_2 - 0.046 13.6 0.8 0.065 13.1 0.8 1.2 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS zinc_ribbon_2 PF13240.6 NODE_85984_length_186_cov_1.417219_g78043_i0forward_frame_2 - 0.083 12.6 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 zinc-ribbon domain Oxidored_q5_N PF01059.17 NODE_85982_length_186_cov_1.423841_g78041_i0reverse_frame_2 - 0.093 12.8 0.2 0.11 12.6 0.2 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Aft1_HRA PF11786.8 NODE_85981_length_186_cov_1.430464_g78040_i0forward_frame_3 - 0.077 13.3 0.0 0.098 13.0 0.0 1.2 1 0 0 1 1 1 0 Aft1 HRA domain Pox_I6 PF04595.13 NODE_85977_length_186_cov_1.437086_g78036_i0reverse_frame_3 - 0.017 14.1 0.3 0.018 14.0 0.3 1.0 1 0 0 1 1 1 0 Poxvirus I6-like family ANTH PF07651.16 NODE_85977_length_186_cov_1.437086_g78036_i0reverse_frame_3 - 0.047 12.7 0.7 0.052 12.5 0.7 1.0 1 0 0 1 1 1 0 ANTH domain EamA PF00892.20 NODE_85976_length_186_cov_1.443709_g78035_i0forward_frame_3 - 0.0045 17.2 4.7 0.0047 17.1 4.7 1.0 1 0 0 1 1 1 1 EamA-like transporter family DUF624 PF04854.14 NODE_85976_length_186_cov_1.443709_g78035_i0forward_frame_3 - 0.025 14.7 4.1 0.092 12.9 4.1 2.1 1 1 0 1 1 1 0 Protein of unknown function, DUF624 7TMR-DISM_7TM PF07695.11 NODE_85976_length_186_cov_1.443709_g78035_i0forward_frame_3 - 0.028 14.3 5.6 0.029 14.3 5.6 1.0 1 0 0 1 1 1 0 7TM diverse intracellular signalling AC_N PF16214.5 NODE_85975_length_186_cov_1.450331_g78034_i0reverse_frame_3 - 0.069 12.3 0.1 0.076 12.1 0.1 1.0 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region DUF1974 PF09317.11 NODE_85974_length_186_cov_1.456954_g78033_i0forward_frame_2 - 0.12 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) Importin_rep_2 PF18786.1 NODE_85971_length_186_cov_1.470199_g78030_i0forward_frame_3 - 0.058 13.3 0.1 0.098 12.5 0.1 1.3 1 0 0 1 1 1 0 Importin 13 repeat TMEMspv1-c74-12 PF11044.8 NODE_85969_length_186_cov_1.483444_g78028_i0forward_frame_3 - 0.041 13.9 0.0 0.058 13.4 0.0 1.3 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein Cupin_5 PF06172.11 NODE_85966_length_186_cov_1.503311_g78025_i0forward_frame_3 - 0.099 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Cupin superfamily (DUF985) DUF962 PF06127.11 NODE_85965_length_186_cov_1.509934_g78024_i0reverse_frame_3 - 0.047 13.8 0.3 0.049 13.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DUF4634 PF15465.6 NODE_85962_length_186_cov_1.523179_g78021_i0forward_frame_3 - 0.11 12.8 0.0 0.14 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4634) Toxin_24 PF08094.11 NODE_85960_length_186_cov_1.523179_g78019_i0forward_frame_3 - 0.2 11.5 1.6 0.21 11.4 0.3 1.7 2 0 0 2 2 2 0 Conotoxin TVIIA/GS family DUF188 PF02639.14 NODE_85959_length_186_cov_1.523179_g78018_i0reverse_frame_3 - 0.041 13.6 1.7 0.045 13.4 1.7 1.1 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 RCC1 PF00415.18 NODE_85958_length_186_cov_1.529801_g78017_i0reverse_frame_2 - 2.4e-06 28.1 0.0 0.023 15.3 0.1 2.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 NODE_85958_length_186_cov_1.529801_g78017_i0reverse_frame_2 - 1.8e-05 24.4 0.0 2.2e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Regulator of chromosome condensation (RCC1) repeat PAP_PilO PF06864.12 NODE_85957_length_186_cov_1.536424_g78016_i0reverse_frame_3 - 0.13 11.0 6.0 0.15 10.9 6.0 1.0 1 0 0 1 1 1 0 Pilin accessory protein (PilO) CAP_N PF01213.19 NODE_85957_length_186_cov_1.536424_g78016_i0reverse_frame_3 - 2.1 7.8 13.7 2 7.8 13.7 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 NODE_85957_length_186_cov_1.536424_g78016_i0reverse_frame_3 - 7.5 6.6 8.8 7 6.7 8.8 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator Tryp_inh PF17983.1 NODE_85947_length_186_cov_1.576159_g78006_i0forward_frame_3 - 0.0064 16.6 1.0 0.0064 16.6 1.0 1.5 2 0 0 2 2 2 1 Trypsin inhibitors 1,2 and 3 Ada_Zn_binding PF02805.16 NODE_85945_length_186_cov_1.582781_g78004_i0reverse_frame_2 - 0.15 12.1 1.5 1.8 8.7 0.1 2.1 2 0 0 2 2 2 0 Metal binding domain of Ada Lipase PF00151.19 NODE_85945_length_186_cov_1.582781_g78004_i0reverse_frame_2 - 0.21 10.9 3.1 0.22 10.8 3.1 1.1 1 0 0 1 1 1 0 Lipase RFX5_DNA_bdg PF14621.6 NODE_85943_length_186_cov_1.582781_g78002_i0reverse_frame_3 - 0.29 10.9 5.1 0.29 10.9 5.1 1.0 1 0 0 1 1 1 0 RFX5 DNA-binding domain Pannexin_like PF12534.8 NODE_85939_length_186_cov_1.582781_g77998_i0reverse_frame_3 - 1.2 8.2 5.6 1.1 8.3 5.6 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 GILT PF03227.16 NODE_85938_length_186_cov_1.582781_g77997_i0forward_frame_3 - 0.036 14.3 1.9 0.041 14.1 1.9 1.1 1 0 0 1 1 1 0 Gamma interferon inducible lysosomal thiol reductase (GILT) zf-CCHC_5 PF14787.6 NODE_85932_length_186_cov_1.582781_g77991_i0reverse_frame_2 - 0.83 9.4 3.8 13 5.6 0.1 2.4 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger IPTL-CTERM PF18203.1 NODE_85929_length_186_cov_1.589404_g77988_i0forward_frame_3 - 0.064 13.2 0.1 0.088 12.7 0.1 1.2 1 0 0 1 1 1 0 IPTL-CTERM motif KRTAP7 PF15034.6 NODE_85929_length_186_cov_1.589404_g77988_i0forward_frame_2 - 0.065 14.2 0.2 0.07 14.1 0.2 1.2 1 0 0 1 1 1 0 KRTAP type 7 family Herpes_UL56 PF04534.12 NODE_85928_length_186_cov_1.589404_g77987_i0forward_frame_2 - 0.055 12.9 0.1 0.055 12.9 0.1 1.0 1 0 0 1 1 1 0 Herpesvirus UL56 protein RHS PF03527.14 NODE_85917_length_186_cov_1.615894_g77976_i0forward_frame_3 - 0.014 15.1 0.0 0.02 14.7 0.0 1.2 1 0 0 1 1 1 0 RHS protein DNAJ_related PF12339.8 NODE_85916_length_186_cov_1.615894_g77975_i0forward_frame_3 - 0.0012 19.1 0.4 0.0013 19.0 0.4 1.1 1 0 0 1 1 1 1 DNA-J related protein Sigma_1_2 PF03084.14 NODE_85916_length_186_cov_1.615894_g77975_i0forward_frame_3 - 0.17 11.1 0.6 0.17 11.1 0.6 1.0 1 0 0 1 1 1 0 Reoviral Sigma1/Sigma2 family Ribosomal_L15e PF00827.17 NODE_85914_length_186_cov_1.629139_g77973_i0forward_frame_2 - 6.1e-25 88.1 0.1 6.4e-25 88.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal L15 Propeptide_C1 PF08127.13 NODE_85914_length_186_cov_1.629139_g77973_i0forward_frame_2 - 0.032 14.1 0.3 0.081 12.8 0.1 1.7 1 1 1 2 2 2 0 Peptidase family C1 propeptide Presenilin PF01080.17 NODE_85913_length_186_cov_1.668874_g77972_i0reverse_frame_2 - 0.19 10.5 2.9 0.18 10.5 2.9 1.0 1 0 0 1 1 1 0 Presenilin Sec3_C_2 PF15278.6 NODE_85912_length_186_cov_1.675497_g77971_i0reverse_frame_3 - 0.14 12.5 0.1 0.17 12.2 0.1 1.1 1 0 0 1 1 1 0 Sec3 exocyst complex subunit CRS1_YhbY PF01985.21 NODE_85912_length_186_cov_1.675497_g77971_i0forward_frame_2 - 0.11 12.7 0.1 0.13 12.5 0.1 1.2 1 0 0 1 1 1 0 CRS1 / YhbY (CRM) domain PTS_EIIA_2 PF00359.22 NODE_85908_length_186_cov_1.688742_g77967_i0reverse_frame_3 - 1.2e-10 41.4 0.0 1.3e-10 41.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HMG_box_2 PF09011.10 NODE_85907_length_186_cov_1.695364_g77966_i0forward_frame_2 - 0.00068 20.2 1.0 0.00082 19.9 1.0 1.2 1 0 0 1 1 1 1 HMG-box domain HMG_box PF00505.19 NODE_85907_length_186_cov_1.695364_g77966_i0forward_frame_2 - 0.077 13.4 0.8 0.098 13.1 0.8 1.1 1 0 0 1 1 1 0 HMG (high mobility group) box Cys_rich_CPCC PF14206.6 NODE_85906_length_186_cov_1.701987_g77965_i0reverse_frame_2 - 0.11 12.4 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Cysteine-rich CPCC Neil1-DNA_bind PF09292.10 NODE_85903_length_186_cov_1.708609_g77962_i0forward_frame_3 - 0.11 12.5 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Endonuclease VIII-like 1, DNA bind DUF4635 PF15466.6 NODE_85898_length_186_cov_1.754967_g77957_i0reverse_frame_3 - 0.09 12.3 0.2 0.098 12.2 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4635) IMUP PF15761.5 NODE_85898_length_186_cov_1.754967_g77957_i0forward_frame_3 - 0.024 15.3 4.5 0.024 15.3 4.5 1.1 1 0 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 NODE_85898_length_186_cov_1.754967_g77957_i0forward_frame_3 - 0.045 13.4 5.6 0.044 13.4 5.6 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Spt20 PF12090.8 NODE_85898_length_186_cov_1.754967_g77957_i0forward_frame_2 - 0.052 13.2 3.6 0.05 13.2 3.6 1.0 1 0 0 1 1 1 0 Spt20 family DUF2456 PF10445.9 NODE_85897_length_186_cov_1.754967_g77956_i0reverse_frame_3 - 0.13 12.4 0.0 0.14 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2456) ESPR PF13018.6 NODE_85897_length_186_cov_1.754967_g77956_i0reverse_frame_3 - 0.19 11.5 0.1 0.31 10.9 0.1 1.3 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system Ephrin_rec_like PF07699.13 NODE_85896_length_186_cov_1.754967_g77955_i0forward_frame_2 - 0.0011 18.7 7.9 0.0012 18.5 7.9 1.1 1 0 0 1 1 1 1 Putative ephrin-receptor like Opy2 PF09463.10 NODE_85896_length_186_cov_1.754967_g77955_i0forward_frame_2 - 0.11 12.8 11.1 0.83 10.0 11.5 1.9 1 1 1 2 2 2 0 Opy2 protein MPS-4 PF17523.2 NODE_85895_length_186_cov_1.761589_g77954_i0reverse_frame_2 - 0.48 10.6 2.7 0.63 10.2 2.7 1.2 1 0 0 1 1 1 0 MinK-related peptide, potassium channel accessory sub-unit protein 4 DUF3531 PF12049.8 NODE_85893_length_186_cov_1.761589_g77952_i0reverse_frame_3 - 0.091 12.7 0.0 0.097 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3531) DctP PF03480.13 NODE_85890_length_186_cov_1.788079_g77949_i0forward_frame_2 - 1.7e-22 80.1 0.0 1.8e-22 80.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein, family 7 Phe_tRNA-synt_N PF02912.18 NODE_85887_length_186_cov_1.807947_g77946_i0forward_frame_2 - 0.038 13.9 0.0 0.049 13.6 0.0 1.1 1 0 0 1 1 1 0 Aminoacyl tRNA synthetase class II, N-terminal domain SRP9-21 PF05486.12 NODE_85880_length_186_cov_1.847682_g77939_i0reverse_frame_2 - 0.0073 16.7 0.2 0.0082 16.5 0.2 1.1 1 0 0 1 1 1 1 Signal recognition particle 9 kDa protein (SRP9) NUC205 PF08168.11 NODE_85879_length_186_cov_1.847682_g77938_i0forward_frame_2 - 0.17 11.4 0.6 0.25 10.9 0.6 1.3 1 0 0 1 1 1 0 NUC205 domain AP4E_app_platf PF14807.6 NODE_85877_length_186_cov_1.854305_g77936_i0forward_frame_3 - 0.1 13.0 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform GramPos_pilinBB PF16569.5 NODE_85876_length_186_cov_1.854305_g77935_i0forward_frame_2 - 0.25 12.2 0.0 0.27 12.1 0.0 1.0 1 0 0 1 1 1 0 Gram-positive pilin backbone subunit 2, Cna-B-like domain Fer4_6 PF12837.7 NODE_85874_length_186_cov_1.867550_g77933_i0reverse_frame_2 - 0.024 14.7 0.5 0.031 14.4 0.5 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain Defensin_int PF17858.1 NODE_85870_length_186_cov_1.887417_g77929_i0reverse_frame_3 - 0.025 14.6 7.4 0.025 14.6 7.4 1.6 2 0 0 2 2 2 0 Platypus intermediate defensin-like peptide FXMR_C2 PF16098.5 NODE_85866_length_186_cov_1.933775_g77925_i0reverse_frame_3 - 0.11 13.0 0.4 0.13 12.8 0.4 1.0 1 0 0 1 1 1 0 Fragile X-related mental retardation protein C-terminal region 2 NitrOD1 PF18549.1 NODE_85864_length_186_cov_1.953642_g77923_i0forward_frame_3 - 0.064 13.2 0.3 0.076 13.0 0.3 1.1 1 0 0 1 1 1 0 Nitrosopumilus output domain 1 DUF4996 PF16387.5 NODE_85858_length_186_cov_1.973510_g77917_i0reverse_frame_2 - 0.029 14.8 0.4 0.035 14.6 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function SHP PF03579.13 NODE_85855_length_186_cov_1.980132_g77914_i0reverse_frame_2 - 0.023 14.7 0.8 0.033 14.2 0.8 1.3 1 0 0 1 1 1 0 Small hydrophobic protein DUF702 PF05142.12 NODE_85855_length_186_cov_1.980132_g77914_i0forward_frame_3 - 1.2 9.6 7.2 1.4 9.4 7.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF702) zf-C2H2 PF00096.26 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.0009 19.6 1.7 0.0009 19.6 1.7 2.1 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.0022 18.7 1.3 0.0022 18.7 1.3 2.4 3 0 0 3 3 3 1 C2H2-type zinc finger zf-C2H2_2 PF12756.7 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.0069 16.7 3.5 0.0092 16.3 3.5 1.3 1 1 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.0082 16.4 0.7 0.0082 16.4 0.7 1.9 3 0 0 3 3 3 1 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.036 14.1 1.6 0.036 14.1 1.6 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2HE PF16278.5 NODE_85854_length_186_cov_1.986755_g77913_i0reverse_frame_2 - 0.16 12.5 4.3 0.17 12.3 4.2 1.4 1 1 0 1 1 1 0 C2HE / C2H2 / C2HC zinc-binding finger DUF3772 PF12607.8 NODE_85851_length_186_cov_2.006623_g77910_i0reverse_frame_2 - 0.055 13.2 0.1 0.087 12.6 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) ABM PF03992.16 NODE_85850_length_186_cov_2.006623_g77909_i0forward_frame_2 - 3.3e-10 39.9 0.0 3.5e-10 39.9 0.0 1.0 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF2752 PF10825.8 NODE_85848_length_186_cov_2.019868_g77907_i0reverse_frame_2 - 0.046 13.8 1.1 0.072 13.2 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) DUF1624 PF07786.12 NODE_85845_length_186_cov_2.026490_g77904_i0reverse_frame_2 - 0.072 12.6 0.2 0.087 12.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1624) Nepo_coat_N PF03689.15 NODE_85842_length_186_cov_2.072848_g77901_i0forward_frame_2 - 0.062 13.2 0.1 0.074 13.0 0.1 1.1 1 0 0 1 1 1 0 Nepovirus coat protein, N-terminal domain RNHCP PF12647.7 NODE_85841_length_186_cov_2.079470_g77900_i0forward_frame_2 - 0.13 12.3 1.5 0.13 12.2 0.7 1.5 1 1 0 1 1 1 0 RNHCP domain DUF1571 PF07608.11 NODE_85832_length_186_cov_2.119205_g77891_i0reverse_frame_2 - 0.035 13.6 0.0 0.035 13.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1571) DUF4085 PF13315.6 NODE_85828_length_186_cov_2.132450_g77887_i0forward_frame_2 - 0.082 12.5 0.0 0.082 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4085) BES1_N PF05687.13 NODE_85826_length_186_cov_2.185430_g77885_i0reverse_frame_3 - 2.7 8.3 6.4 2.8 8.3 6.4 1.1 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal DUF3432 PF11914.8 NODE_85826_length_186_cov_2.185430_g77885_i0reverse_frame_3 - 9.7 6.5 20.4 12 6.2 20.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3432) DUF3824 PF12868.7 NODE_85821_length_186_cov_2.231788_g77880_i0reverse_frame_3 - 0.022 15.4 0.7 0.022 15.4 0.7 1.2 1 0 0 1 1 1 0 Domain of unknwon function (DUF3824) DUF3915 PF13054.6 NODE_85821_length_186_cov_2.231788_g77880_i0reverse_frame_3 - 0.94 9.5 11.2 0.19 11.7 5.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3915) DUF3682 PF12446.8 NODE_85821_length_186_cov_2.231788_g77880_i0reverse_frame_3 - 7.7 7.0 10.0 17 5.9 10.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3682) Toxin_11 PF07473.11 NODE_85818_length_186_cov_2.245033_g77877_i0reverse_frame_2 - 0.4 10.8 13.3 0.26 11.4 8.2 2.5 2 1 0 2 2 2 0 Spasmodic peptide gm9a; conotoxin from Conus species Cas_CXXC_CXXC PF09706.10 NODE_85818_length_186_cov_2.245033_g77877_i0forward_frame_2 - 0.056 13.7 0.0 0.067 13.4 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) Ctr PF04145.15 NODE_85816_length_186_cov_2.258278_g77875_i0reverse_frame_3 - 0.011 16.4 0.0 0.011 16.3 0.0 1.0 1 0 0 1 1 1 0 Ctr copper transporter family Pox_A32 PF04665.12 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 1.1e-06 28.3 0.0 1.2e-06 28.2 0.0 1.0 1 0 0 1 1 1 1 Poxvirus A32 protein NACHT PF05729.12 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.00013 21.9 0.0 0.00015 21.7 0.0 1.1 1 0 0 1 1 1 1 NACHT domain DUF2075 PF09848.9 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.00059 19.2 0.0 0.00059 19.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0033 17.7 0.0 0.0037 17.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0035 17.0 0.0 0.0046 16.7 0.0 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain NB-ARC PF00931.22 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0045 16.2 0.0 0.0048 16.1 0.0 1.1 1 0 0 1 1 1 1 NB-ARC domain FtsK_SpoIIIE PF01580.18 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0056 16.1 0.0 0.0065 15.8 0.0 1.0 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_16 PF13191.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0062 16.9 0.0 0.0062 16.9 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain cobW PF02492.19 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0065 16.1 0.1 0.0073 15.9 0.1 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain T2SSE PF00437.20 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0066 15.5 0.0 0.0068 15.5 0.0 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_25 PF13481.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.0074 15.9 0.0 0.0079 15.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.012 14.9 0.0 0.014 14.7 0.0 1.0 1 0 0 1 1 1 0 Zeta toxin DAP3 PF10236.9 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.015 14.5 0.1 0.017 14.3 0.1 1.0 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 MobB PF03205.14 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.016 15.1 0.1 0.017 15.0 0.1 1.1 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_7 PF12775.7 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.03 13.8 0.0 0.033 13.7 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region ATPase_2 PF01637.18 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.033 14.1 0.0 0.036 14.0 0.0 1.0 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.043 13.5 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.047 14.2 0.1 0.048 14.2 0.1 1.1 1 0 0 1 1 1 0 ABC transporter DUF463 PF04317.12 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.075 12.0 0.1 0.075 12.0 0.1 1.0 1 0 0 1 1 1 0 YcjX-like family, DUF463 CbiA PF01656.23 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.085 12.9 0.0 0.085 12.9 0.0 1.1 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RNA_helicase PF00910.22 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.1 13.0 0.0 0.1 13.0 0.0 1.1 1 0 0 1 1 1 0 RNA helicase KAP_NTPase PF07693.14 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.1 11.8 0.0 0.1 11.8 0.0 1.0 1 0 0 1 1 1 0 KAP family P-loop domain SRPRB PF09439.10 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.11 11.9 0.0 0.12 11.8 0.0 1.1 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit NTPase_1 PF03266.15 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.14 12.0 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 NTPase TrwB_AAD_bind PF10412.9 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.14 11.0 0.0 0.15 10.9 0.0 1.0 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_14 PF13173.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.16 12.0 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain Septin PF00735.18 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.17 11.1 0.1 0.22 10.8 0.1 1.1 1 0 0 1 1 1 0 Septin RsgA_GTPase PF03193.16 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.18 11.7 0.1 0.21 11.5 0.1 1.1 1 0 0 1 1 1 0 RsgA GTPase Sigma54_activat PF00158.26 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.24 11.1 0.0 0.25 11.0 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_23 PF13476.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.25 11.8 0.1 0.26 11.7 0.1 1.1 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 NODE_85813_length_186_cov_2.271523_g77872_i0reverse_frame_2 - 0.3 11.3 0.1 0.33 11.2 0.1 1.1 1 0 0 1 1 1 0 AAA domain DUF2101 PF09874.9 NODE_85806_length_186_cov_2.337748_g77865_i0forward_frame_3 - 9.2 5.9 9.8 9.2 5.9 9.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) SAM_3 PF18016.1 NODE_85804_length_186_cov_2.357616_g77863_i0forward_frame_2 - 0.004 16.9 0.0 0.0053 16.5 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) PARG_cat PF05028.14 NODE_85799_length_186_cov_2.443709_g77858_i0reverse_frame_2 - 0.069 12.4 0.0 0.073 12.4 0.0 1.0 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) Guanylin PF02058.15 NODE_85794_length_186_cov_2.470199_g77853_i0forward_frame_2 - 0.28 11.7 4.2 0.29 11.6 4.2 1.1 1 0 0 1 1 1 0 Guanylin precursor HrpE PF06188.12 NODE_85792_length_186_cov_2.516556_g77851_i0reverse_frame_3 - 0.005 16.7 1.2 0.005 16.7 1.2 1.1 1 0 0 1 1 1 1 HrpE/YscL/FliH and V-type ATPase subunit E Nbl1_Borealin_N PF10444.9 NODE_85792_length_186_cov_2.516556_g77851_i0reverse_frame_3 - 0.019 14.6 0.6 0.035 13.8 0.6 1.5 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal CCDC-167 PF15188.6 NODE_85791_length_186_cov_2.529801_g77850_i0reverse_frame_3 - 0.055 13.8 0.0 0.066 13.6 0.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 DNA_pol_A_exo1 PF01612.20 NODE_85790_length_186_cov_2.562914_g77849_i0forward_frame_2 - 0.031 14.0 0.3 0.033 13.9 0.3 1.2 1 1 0 1 1 1 0 3'-5' exonuclease UPF0302 PF08864.10 NODE_85790_length_186_cov_2.562914_g77849_i0forward_frame_2 - 0.032 14.3 1.3 0.037 14.1 1.3 1.1 1 0 0 1 1 1 0 UPF0302 domain Flavi_capsid PF01003.19 NODE_85790_length_186_cov_2.562914_g77849_i0forward_frame_2 - 0.054 13.3 0.9 0.072 12.9 0.6 1.4 1 1 0 1 1 1 0 Flavivirus capsid protein C Rab_bind PF16704.5 NODE_85790_length_186_cov_2.562914_g77849_i0forward_frame_2 - 0.069 13.2 0.3 0.093 12.8 0.3 1.3 1 1 0 1 1 1 0 Rab binding domain HAT_KAT11 PF08214.11 NODE_85788_length_186_cov_2.582781_g77847_i0forward_frame_3 - 0.25 10.6 0.2 0.25 10.6 0.2 1.0 1 0 0 1 1 1 0 Histone acetylation protein RNA_GG_bind PF10258.9 NODE_85787_length_186_cov_2.589404_g77846_i0forward_frame_3 - 7e-08 32.4 0.0 7.8e-08 32.3 0.0 1.0 1 0 0 1 1 1 1 PHAX RNA-binding domain Fst_toxin PF13955.6 NODE_85786_length_186_cov_2.596026_g77845_i0forward_frame_2 - 0.13 12.2 0.5 0.26 11.3 0.5 1.5 1 0 0 1 1 1 0 Toxin Fst, type I toxin-antitoxin system DUF4187 PF13821.6 NODE_85780_length_186_cov_2.715232_g77839_i0forward_frame_3 - 0.56 10.0 5.3 0.73 9.7 5.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4187) DUF2448 PF10476.9 NODE_85779_length_186_cov_2.748344_g77838_i0forward_frame_3 - 0.025 14.5 0.4 0.027 14.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2448) tRNA_anti-codon PF01336.25 NODE_85778_length_186_cov_2.761589_g77837_i0reverse_frame_3 - 0.0014 18.5 0.1 0.0032 17.4 0.1 1.6 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain zf-Mss51 PF13824.6 NODE_85778_length_186_cov_2.761589_g77837_i0reverse_frame_2 - 0.0099 16.0 0.5 0.011 15.9 0.5 1.2 1 0 0 1 1 1 1 Zinc-finger of mitochondrial splicing suppressor 51 Dus PF01207.17 NODE_85777_length_186_cov_2.781457_g77836_i0reverse_frame_2 - 1.1e-08 34.6 0.0 1.1e-08 34.5 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) Ndc1_Nup PF09531.10 NODE_85776_length_186_cov_2.854305_g77835_i0reverse_frame_3 - 8.5 4.9 10.4 8.4 5.0 10.4 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF4590 PF15257.6 NODE_85775_length_186_cov_2.860927_g77834_i0reverse_frame_3 - 0.024 14.5 2.6 0.028 14.4 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4590) Intg_mem_TP0381 PF09529.10 NODE_85769_length_186_cov_2.986755_g77828_i0forward_frame_3 - 0.072 12.6 0.0 0.094 12.2 0.0 1.1 1 0 0 1 1 1 0 Integral membrane protein (intg_mem_TP0381) AtpR PF12966.7 NODE_85769_length_186_cov_2.986755_g77828_i0forward_frame_2 - 0.023 15.1 1.7 0.027 14.9 1.7 1.1 1 0 0 1 1 1 0 N-ATPase, AtpR subunit FlpD PF02662.16 NODE_85768_length_186_cov_3.019868_g77827_i0reverse_frame_3 - 0.046 13.7 0.0 0.053 13.5 0.0 1.0 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit DUF4819 PF16090.5 NODE_85766_length_186_cov_3.092715_g77825_i0reverse_frame_3 - 0.2 11.8 0.0 0.23 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4819) Citrate_synt PF00285.21 NODE_85765_length_186_cov_3.105960_g77824_i0forward_frame_3 - 8e-07 28.4 0.5 8.3e-07 28.4 0.5 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Tubulin PF00091.25 NODE_85764_length_186_cov_3.119205_g77823_i0reverse_frame_3 - 1.5e-10 41.6 0.0 1.8e-10 41.4 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain DUF2935 PF11155.8 NODE_85764_length_186_cov_3.119205_g77823_i0reverse_frame_3 - 0.12 12.7 0.3 1 9.7 0.3 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) TAS2R PF05296.13 NODE_85763_length_186_cov_3.152318_g77822_i0forward_frame_3 - 0.064 12.3 3.2 0.072 12.2 3.2 1.1 1 0 0 1 1 1 0 Taste receptor protein (TAS2R) Ribosomal_S9 PF00380.19 NODE_85761_length_186_cov_3.655629_g77820_i0forward_frame_3 - 5.3 7.6 6.6 7.1 7.2 6.6 1.2 1 0 0 1 1 1 0 Ribosomal protein S9/S16 Spc7_N PF15402.6 NODE_85757_length_186_cov_4.304636_g77816_i0reverse_frame_3 - 4 5.6 10.3 4.3 5.5 10.3 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 Arm-DNA-bind_3 PF13356.6 NODE_85756_length_186_cov_4.456954_g77815_i0reverse_frame_2 - 0.063 13.7 1.8 0.17 12.3 1.8 1.7 1 1 0 1 1 1 0 Arm DNA-binding domain DUF4217 PF13959.6 NODE_85752_length_186_cov_8.589404_g77811_i0reverse_frame_2 - 0.14 12.4 3.7 4.6 7.5 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4217) VWA_CoxE PF05762.14 NODE_85750_length_186_cov_12.311258_g77809_i0reverse_frame_3 - 0.071 12.5 0.0 0.081 12.3 0.0 1.0 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein DUF2705 PF10920.8 NODE_85750_length_186_cov_12.311258_g77809_i0forward_frame_2 - 0.02 14.2 2.3 0.021 14.1 2.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2705) Col_cuticle_N PF01484.17 NODE_85745_length_186_cov_22.152318_g77804_i0reverse_frame_2 - 1.7 8.8 5.5 1 9.5 1.8 1.9 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain DUF948 PF06103.11 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.0059 16.8 0.6 0.0064 16.7 0.6 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) ApoLp-III PF07464.11 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.017 15.2 0.9 0.019 15.1 0.9 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) Med21 PF11221.8 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.033 14.5 0.5 0.037 14.3 0.5 1.0 1 0 0 1 1 1 0 Subunit 21 of Mediator complex RVT_3 PF13456.6 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.067 13.0 0.2 0.08 12.8 0.2 1.1 1 0 0 1 1 1 0 Reverse transcriptase-like DUF3916 PF13079.6 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.068 13.1 0.4 0.08 12.8 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) POX PF07526.11 NODE_85742_length_186_cov_23.072848_g77801_i0forward_frame_2 - 0.071 13.7 0.1 0.079 13.5 0.1 1.1 1 0 0 1 1 1 0 Associated with HOX Enolase_N PF03952.16 NODE_85741_length_186_cov_25.218543_g77800_i0reverse_frame_2 - 0.15 12.2 0.1 0.16 12.1 0.1 1.0 1 0 0 1 1 1 0 Enolase, N-terminal domain Gal_mutarotas_2 PF13802.6 NODE_85740_length_186_cov_26.026490_g77799_i0reverse_frame_3 - 0.01 16.1 0.1 0.016 15.5 0.1 1.3 1 0 0 1 1 1 0 Galactose mutarotase-like Lung_7-TM_R PF06814.13 NODE_85736_length_186_cov_27.887417_g77795_i0reverse_frame_3 - 0.0017 17.6 0.1 0.0019 17.5 0.1 1.0 1 0 0 1 1 1 1 Lung seven transmembrane receptor Babuvirus_MP PF07234.11 NODE_85730_length_186_cov_31.536424_g77789_i0forward_frame_2 - 0.028 14.6 1.2 0.028 14.6 1.2 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein DUF1676 PF07898.13 NODE_85729_length_186_cov_31.602649_g77788_i0reverse_frame_3 - 0.057 13.5 0.5 0.064 13.3 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF4267 PF14087.6 NODE_85723_length_186_cov_32.867550_g77782_i0forward_frame_3 - 0.16 12.0 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4267) DUF5346 PF17281.2 NODE_85718_length_186_cov_34.384106_g77777_i0reverse_frame_3 - 0.071 13.1 0.0 0.073 13.1 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5346) Ribosomal_L23eN PF03939.13 NODE_85712_length_186_cov_38.000000_g77771_i0forward_frame_3 - 0.89 9.8 3.5 1.9 8.8 3.4 1.5 1 1 0 1 1 1 0 Ribosomal protein L23, N-terminal domain DUF4819 PF16090.5 NODE_85707_length_186_cov_39.754967_g77766_i0reverse_frame_2 - 0.1 12.7 0.1 0.4 10.8 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4819) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks452.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks452.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks452.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks452.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:49:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DGF-1_5 PF11038.8 NODE_85701_length_186_cov_42.688742_g77760_i0forward_frame_3 - 0.015 14.7 0.1 0.016 14.6 0.1 1.1 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 GlyL_C PF12524.8 NODE_85700_length_186_cov_43.046358_g77759_i0reverse_frame_2 - 0.45 10.7 4.4 0.15 12.2 0.9 1.7 2 0 0 2 2 2 0 dsDNA virus glycoprotein L C terminal GSG-1 PF07803.11 NODE_85700_length_186_cov_43.046358_g77759_i0forward_frame_3 - 0.086 12.8 0.1 0.095 12.6 0.1 1.1 1 0 0 1 1 1 0 GSG1-like protein SBF PF01758.16 NODE_85699_length_186_cov_44.761589_g77758_i0reverse_frame_2 - 0.0055 16.4 0.0 0.0057 16.4 0.0 1.0 1 0 0 1 1 1 1 Sodium Bile acid symporter family TORC_N PF12884.7 NODE_85695_length_186_cov_50.370861_g77754_i0reverse_frame_2 - 0.017 15.9 0.8 0.02 15.7 0.8 1.2 1 0 0 1 1 1 0 Transducer of regulated CREB activity, N terminus Med8 PF10232.9 NODE_85693_length_186_cov_52.105960_g77752_i0reverse_frame_2 - 1.9 8.0 5.2 2.2 7.8 5.2 1.0 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 CENP-B_dimeris PF09026.10 NODE_85693_length_186_cov_52.105960_g77752_i0reverse_frame_2 - 6 7.3 17.3 1.4 9.4 14.2 1.5 1 1 1 2 2 2 0 Centromere protein B dimerisation domain VPDSG-CTERM PF18205.1 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_3 - 0.036 13.9 2.7 0.036 13.9 2.7 2.3 2 0 0 2 2 2 0 VPDSG-CTERM motif COX15-CtaA PF02628.15 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_3 - 0.15 11.1 4.7 0.17 10.9 4.7 1.0 1 0 0 1 1 1 0 Cytochrome oxidase assembly protein DUF4131 PF13567.6 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_3 - 1.7 8.3 8.6 1.9 8.1 8.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF3290 PF11694.8 NODE_85693_length_186_cov_52.105960_g77752_i0forward_frame_3 - 4.6 7.2 5.6 5.5 7.0 5.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) Mit_KHE1 PF10173.9 NODE_85683_length_186_cov_70.741722_g77742_i0forward_frame_3 - 0.018 15.1 0.3 0.036 14.2 0.1 1.5 1 1 1 2 2 2 0 Mitochondrial K+-H+ exchange-related T4BSS_DotH_IcmK PF12293.8 NODE_85680_length_186_cov_71.715232_g77739_i0reverse_frame_2 - 0.038 13.2 0.0 0.044 13.0 0.0 1.1 1 0 0 1 1 1 0 Putative outer membrane core complex of type IVb secretion PTPlike_phytase PF14566.6 NODE_85679_length_186_cov_72.536424_g77738_i0forward_frame_3 - 0.031 14.4 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Inositol hexakisphosphate ET PF01684.16 NODE_85675_length_186_cov_76.854305_g77734_i0forward_frame_3 - 0.031 14.6 0.1 0.038 14.3 0.1 1.1 1 0 0 1 1 1 0 ET module zf_CCCH_5 PF18384.1 NODE_85675_length_186_cov_76.854305_g77734_i0forward_frame_2 - 1.1 9.5 0.1 1.1 9.5 0.1 2.8 2 1 1 3 3 3 0 Unkempt Zinc finger domain 1 (Znf1) FYVE PF01363.21 NODE_85673_length_186_cov_79.092715_g77732_i0reverse_frame_2 - 0.0042 17.2 6.6 0.0055 16.8 6.6 1.2 1 0 0 1 1 1 1 FYVE zinc finger Rrn6 PF10214.9 NODE_85673_length_186_cov_79.092715_g77732_i0reverse_frame_2 - 0.063 11.8 1.1 0.06 11.8 1.1 1.0 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF4096 PF13340.6 NODE_85673_length_186_cov_79.092715_g77732_i0reverse_frame_2 - 0.078 13.2 0.1 0.08 13.2 0.1 1.1 1 0 0 1 1 1 0 Putative transposase of IS4/5 family (DUF4096) Pox_I3 PF04661.12 NODE_85669_length_186_cov_88.854305_g77728_i0reverse_frame_3 - 0.24 10.5 0.0 0.28 10.3 0.0 1.0 1 0 0 1 1 1 0 Poxvirus I3 ssDNA-binding protein TSGP1 PF07771.11 NODE_85669_length_186_cov_88.854305_g77728_i0forward_frame_3 - 0.057 13.6 0.3 0.061 13.5 0.3 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 5-FTHF_cyc-lig PF01812.20 NODE_85666_length_186_cov_99.079470_g77725_i0forward_frame_3 - 1.5e-06 28.2 0.1 1.7e-06 28.0 0.1 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Coagulin PF02035.15 NODE_85665_length_186_cov_100.410596_g77724_i0reverse_frame_2 - 0.021 14.7 0.4 0.021 14.7 0.4 1.0 1 0 0 1 1 1 0 Coagulin C1_1 PF00130.22 NODE_85659_length_186_cov_245.192053_g77718_i0reverse_frame_2 - 0.6 10.0 15.3 0.5 10.3 4.3 2.1 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Ost5 PF05251.12 NODE_85654_length_186_cov_2580.509934_g77713_i0reverse_frame_3 - 0.00024 21.3 0.0 0.00027 21.1 0.0 1.1 1 0 0 1 1 1 1 Oligosaccharyltransferase subunit 5 Peptidase_C48 PF02902.19 NODE_85653_length_186_cov_4498.622517_g77712_i0forward_frame_3 - 0.017 15.0 1.5 0.019 14.8 1.5 1.0 1 0 0 1 1 1 0 Ulp1 protease family, C-terminal catalytic domain SR-25 PF10500.9 NODE_85653_length_186_cov_4498.622517_g77712_i0forward_frame_2 - 0.4 10.3 9.0 0.44 10.1 9.0 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein PEGSRP PF07623.11 ORF99813 - 0.071 12.9 2.1 0.13 12.1 2.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1584) YbjN PF10722.9 ORF99442 - 0.041 13.9 0.2 0.047 13.8 0.2 1.1 1 0 0 1 1 1 0 Putative bacterial sensory transduction regulator Ribosomal_S27e PF01667.17 ORF99279 - 0.038 13.7 0.6 0.056 13.2 0.6 1.3 1 0 0 1 1 1 0 Ribosomal protein S27 Ring_hydroxyl_B PF00866.18 ORF99135 - 0.04 14.0 0.5 0.04 14.0 0.5 1.1 1 0 0 1 1 1 0 Ring hydroxylating beta subunit LRR_6 PF13516.6 ORF98944 - 3.5e-05 23.5 0.9 0.00038 20.3 0.2 2.3 2 0 0 2 2 2 1 Leucine Rich repeat LRR_4 PF12799.7 ORF98944 - 0.058 13.8 1.1 0.15 12.5 1.3 1.7 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF98944 - 0.08 13.5 0.5 0.59 10.9 0.2 2.4 2 1 0 2 2 2 0 Leucine Rich Repeat Protoglobin PF11563.8 ORF98795 - 0.021 14.7 0.0 0.023 14.6 0.0 1.0 1 0 0 1 1 1 0 Protoglobin Peptidase_M54 PF07998.11 ORF98637 - 0.037 14.0 0.4 0.038 14.0 0.4 1.0 1 0 0 1 1 1 0 Peptidase family M54 IPU_b_solenoid PF18783.1 ORF98637 - 0.07 13.2 0.1 0.16 12.0 0.1 1.6 1 0 0 1 1 1 0 Isopullulanase beta-solenoid repeat GerE PF00196.19 ORF98354 - 0.0003 20.3 0.6 0.00034 20.1 0.6 1.1 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family mTERF PF02536.14 ORF98210 - 0.052 12.5 0.0 0.053 12.4 0.0 1.0 1 0 0 1 1 1 0 mTERF TcpF PF06340.11 ORF97511 - 0.12 11.2 0.1 0.12 11.2 0.1 1.0 1 0 0 1 1 1 0 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F Med16 PF11635.8 ORF97454 - 0.2 9.5 2.4 0.2 9.5 2.4 1.1 1 0 0 1 1 1 0 Mediator complex subunit 16 IL23 PF16649.5 ORF97240 - 0.099 12.7 0.2 0.099 12.7 0.2 1.1 1 0 0 1 1 1 0 Interleukin 23 subunit alpha AHL_synthase PF17327.2 ORF96325 - 0.076 12.0 2.3 0.089 11.8 2.2 1.3 1 1 0 1 1 1 0 Acyl homoserine lactone synthase Abhydrolase_1 PF00561.20 ORF95802 - 0.032 13.9 0.1 0.032 13.9 0.1 1.0 1 0 0 1 1 1 0 alpha/beta hydrolase fold 23S_rRNA_IVP PF05635.11 ORF95479 - 0.036 14.4 0.6 0.043 14.1 0.6 1.1 1 0 0 1 1 1 0 23S rRNA-intervening sequence protein ICAM_N PF03921.14 ORF95133 - 0.29 10.9 1.9 0.9 9.3 0.2 2.0 1 1 1 2 2 2 0 Intercellular adhesion molecule (ICAM), N-terminal domain Ring_hydroxyl_B PF00866.18 ORF95010 - 0.04 14.0 0.5 0.04 14.0 0.5 1.1 1 0 0 1 1 1 0 Ring hydroxylating beta subunit zf-C3HC4_2 PF13923.6 ORF94715 - 0.088 12.7 0.5 0.088 12.7 0.5 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Peptidase_U4 PF03419.13 ORF93751 - 0.88 8.8 4.6 1 8.6 4.6 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA ThiS-like PF14453.6 ORF93500 - 0.082 13.0 0.1 0.15 12.2 0.1 1.7 1 1 0 1 1 1 0 ThiS-like ubiquitin FeoC PF09012.10 ORF92730 - 0.21 11.7 5.0 0.32 11.1 5.0 1.3 1 1 0 1 1 1 0 FeoC like transcriptional regulator YhfC PF10086.9 ORF9244 - 0.0035 16.7 0.4 0.0035 16.7 0.4 1.0 1 0 0 1 1 1 1 YhfC intramembrane metalloprotease Peptidase_M54 PF07998.11 ORF9239 - 0.037 14.0 0.4 0.038 14.0 0.4 1.0 1 0 0 1 1 1 0 Peptidase family M54 IPU_b_solenoid PF18783.1 ORF9239 - 0.07 13.2 0.1 0.16 12.0 0.1 1.6 1 0 0 1 1 1 0 Isopullulanase beta-solenoid repeat CCT PF06203.14 ORF92255 - 1.5e-07 31.3 9.9 2.2e-07 30.8 9.9 1.3 1 0 0 1 1 1 1 CCT motif CCT_2 PF09425.10 ORF92255 - 0.062 13.2 3.0 0.14 12.1 3.0 1.6 1 0 0 1 1 1 0 Divergent CCT motif PrpR_N PF06506.11 ORF91908 - 0.038 13.6 0.0 0.038 13.6 0.0 1.0 1 0 0 1 1 1 0 Propionate catabolism activator UPF0370 PF13980.6 ORF91875 - 1.6 8.8 5.6 1.9 8.6 4.8 1.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0370) AIMP2_LysRS_bd PF16780.5 ORF91785 - 0.00077 19.1 0.0 0.00093 18.9 0.0 1.2 1 0 0 1 1 1 1 AIMP2 lysyl-tRNA synthetase binding domain BNIP3 PF06553.12 ORF91533 - 0.049 13.3 0.1 0.052 13.2 0.1 1.0 1 0 0 1 1 1 0 BNIP3 LapA_dom PF06305.11 ORF90904 - 1.1 9.1 3.9 1.2 9.0 3.0 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Homeodomain PF00046.29 ORF9042 - 0.049 13.5 0.2 0.049 13.5 0.2 1.5 2 0 0 2 2 2 0 Homeodomain Thioredoxin_7 PF13899.6 ORF90343 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like UCH PF00443.29 ORF89967 - 1.5e-16 60.7 0.3 1.6e-16 60.6 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF89967 - 0.03 13.9 0.0 0.03 13.9 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase K_oxygenase PF13434.6 ORF89782 - 0.24 10.5 0.0 0.26 10.4 0.0 1.0 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) TMEM52 PF14979.6 ORF89636 - 0.019 14.9 0.9 0.022 14.7 0.9 1.0 1 0 0 1 1 1 0 Transmembrane 52 S1FA PF04689.13 ORF89540 - 5.2 7.3 6.1 8.3 6.6 6.1 1.4 1 1 0 1 1 1 0 DNA binding protein S1FA DUF1640 PF07798.11 ORF89421 - 0.0023 18.0 3.8 0.0024 17.9 3.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) DUF2383 PF09537.10 ORF89421 - 0.0045 17.3 0.4 0.0049 17.2 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) FeoC PF09012.10 ORF89421 - 0.022 14.8 0.5 2.4 8.3 0.1 2.1 2 0 0 2 2 2 0 FeoC like transcriptional regulator HTH_WhiA PF02650.14 ORF89421 - 0.024 15.0 1.2 0.027 14.8 1.2 1.1 1 0 0 1 1 1 0 WhiA C-terminal HTH domain Prok-TraM PF09228.10 ORF89421 - 0.025 15.0 0.2 0.033 14.6 0.2 1.3 1 1 0 1 1 1 0 Prokaryotic Transcriptional repressor TraM KMP11 PF03037.16 ORF89421 - 0.43 11.4 7.7 0.87 10.4 5.9 1.9 1 1 1 2 2 2 0 Kinetoplastid membrane protein 11 DGF-1_5 PF11038.8 ORF88983 - 0.021 14.2 0.4 0.021 14.2 0.4 1.0 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 F-box-like PF12937.7 ORF88983 - 0.033 14.1 2.2 0.043 13.7 2.2 1.3 1 0 0 1 1 1 0 F-box-like DUF4021 PF13213.6 ORF88962 - 0.057 13.4 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4021) Thioredoxin_7 PF13899.6 ORF88797 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Phospholamban PF04272.14 ORF88697 - 0.069 12.6 4.1 0.1 12.1 4.1 1.4 1 1 0 1 1 1 0 Phospholamban DUF2838 PF10998.8 ORF88291 - 0.24 11.7 4.5 0.26 11.5 4.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) CoA_trans PF01144.23 ORF88244 - 0.035 13.5 0.0 0.038 13.4 0.0 1.0 1 0 0 1 1 1 0 Coenzyme A transferase Peptidase_U57 PF05582.12 ORF87733 - 0.12 11.6 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 YabG peptidase U57 SVWC PF15430.6 ORF87722 - 0.017 15.4 0.2 0.017 15.4 0.2 1.1 1 0 0 1 1 1 0 Single domain von Willebrand factor type C Linker_histone PF00538.19 ORF87655 - 0.12 12.8 0.3 0.17 12.3 0.3 1.3 1 0 0 1 1 1 0 linker histone H1 and H5 family Kunitz_BPTI PF00014.23 ORF87415 - 0.3 11.3 4.3 0.087 13.1 1.3 1.7 2 0 0 2 2 2 0 Kunitz/Bovine pancreatic trypsin inhibitor domain DUF4788 PF16032.5 ORF86617 - 0.082 11.8 1.2 0.086 11.8 1.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4788) PHB_depo_C PF06850.11 ORF86055 - 0.2 11.1 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 PHB de-polymerase C-terminus Jiraiya PF15038.6 ORF85631 - 0.047 13.1 0.1 0.05 13.0 0.1 1.0 1 0 0 1 1 1 0 Jiraiya SatRNA_48 PF17485.2 ORF85452 - 0.32 10.1 1.4 0.3 10.2 1.4 1.1 1 0 0 1 1 1 0 Satellite RNA 48 kDa protein Trehalose_recp PF06151.13 ORF84574 - 0.11 11.1 3.8 0.12 10.9 3.8 1.0 1 0 0 1 1 1 0 Trehalose receptor ASFV_J13L PF05568.11 ORF84339 - 2.8 7.7 4.9 3.1 7.5 4.9 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Fer4_2 PF12797.7 ORF84107 - 0.12 12.6 4.4 0.12 12.6 4.4 2.1 2 1 0 2 2 2 0 4Fe-4S binding domain DAN PF03045.15 ORF84056 - 0.042 13.9 0.0 0.044 13.8 0.0 1.1 1 0 0 1 1 1 0 DAN domain SF3A3 PF16837.5 ORF83981 - 0.05 14.1 0.1 0.054 14.0 0.1 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 FliS PF02561.14 ORF83981 - 0.064 13.5 0.1 0.074 13.3 0.1 1.2 1 0 0 1 1 1 0 Flagellar protein FliS FUSC PF04632.12 ORF83929 - 0.001 17.7 0.7 0.0011 17.6 0.7 1.0 1 0 0 1 1 1 1 Fusaric acid resistance protein family DUF2663 PF10864.8 ORF83017 - 0.074 13.5 0.8 0.076 13.4 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) FTHFS PF01268.19 ORF82686 - 0.14 10.4 0.1 0.13 10.4 0.1 1.0 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase DUF930 PF06059.12 ORF82430 - 0.094 13.3 0.2 0.11 13.1 0.2 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF930) BNIP3 PF06553.12 ORF82225 - 0.049 13.3 0.1 0.052 13.2 0.1 1.0 1 0 0 1 1 1 0 BNIP3 EMC3_TMCO1 PF01956.16 ORF81263 - 0.13 12.0 2.0 0.13 12.0 2.0 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Rhomboid_N PF12122.8 ORF81263 - 0.13 12.5 1.5 0.17 12.1 1.5 1.3 1 1 0 1 1 1 0 Cytoplasmic N-terminal domain of rhomboid serine protease Bac_export_2 PF01312.19 ORF81199 - 0.044 13.0 0.4 0.045 13.0 0.4 1.0 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family AMO PF02461.16 ORF811 - 0.02 14.7 0.3 0.02 14.7 0.3 1.0 1 0 0 1 1 1 0 Ammonia monooxygenase SRTM1 PF15872.5 ORF80874 - 0.51 10.5 2.8 0.59 10.3 2.8 1.2 1 0 0 1 1 1 0 Serine-rich and transmembrane domain-containing protein 1 KASH PF10541.9 ORF80874 - 3.5 8.0 7.9 4.2 7.7 7.9 1.4 1 1 0 1 1 1 0 Nuclear envelope localisation domain Phage_holin_3_1 PF05106.12 ORF8077 - 0.013 15.9 0.5 0.014 15.8 0.5 1.1 1 0 0 1 1 1 0 Phage holin family (Lysis protein S) NICE-1 PF15845.5 ORF80150 - 0.085 13.7 4.7 0.1 13.4 4.7 1.2 1 0 0 1 1 1 0 Cysteine-rich C-terminal 1 family DUF679 PF05078.12 ORF79622 - 0.039 13.9 0.2 0.04 13.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF679) Protoglobin PF11563.8 ORF79476 - 0.021 14.7 0.0 0.023 14.6 0.0 1.0 1 0 0 1 1 1 0 Protoglobin DUF5346 PF17281.2 ORF79360 - 0.0087 16.1 1.5 0.0096 15.9 1.5 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5346) Hpre_diP_synt_I PF07456.11 ORF79104 - 0.0044 17.0 0.4 0.005 16.9 0.4 1.0 1 0 0 1 1 1 1 Heptaprenyl diphosphate synthase component I Aa_trans PF01490.18 ORF79104 - 0.13 11.0 0.4 0.12 11.0 0.4 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein MLANA PF14991.6 ORF78593 - 0.15 12.3 0.6 0.17 12.2 0.6 1.1 1 0 0 1 1 1 0 Protein melan-A DUF3270 PF11674.8 ORF78381 - 0.006 16.7 0.1 0.0078 16.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3270) NDUF_B12 PF08122.12 ORF77962 - 0.052 13.6 0.0 0.074 13.1 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B12 subunit family RsmF_methylt_CI PF17126.5 ORF77962 - 0.17 11.9 0.0 0.22 11.6 0.0 1.1 1 0 0 1 1 1 0 RsmF rRNA methyltransferase first C-terminal domain DUF4332 PF14229.6 ORF77811 - 0.013 15.7 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) CBM_X2 PF03442.14 ORF77762 - 0.028 14.5 0.1 0.033 14.3 0.1 1.2 1 0 0 1 1 1 0 Carbohydrate binding domain X2 Thioredoxin_7 PF13899.6 ORF77404 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like PUB PF09409.10 ORF77100 - 0.095 12.6 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 PUB domain zn-ribbon_14 PF16503.5 ORF77075 - 0.078 12.5 0.7 0.13 11.8 0.7 1.3 1 0 0 1 1 1 0 Zinc-ribbon DUF3450 PF11932.8 ORF76531 - 0.012 15.0 1.0 0.012 15.0 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Mad3_BUB1_II PF08171.11 ORF76531 - 0.044 13.9 2.7 0.055 13.6 1.9 1.5 1 1 1 2 2 2 0 Mad3/BUB1 homology region 2 Fibrillin_U_N PF18193.1 ORF76151 - 0.42 10.8 2.8 0.47 10.6 1.9 1.6 1 1 1 2 2 2 0 Fibrillin 1 unique N-terminal domain AMO PF02461.16 ORF75600 - 0.02 14.7 0.3 0.02 14.7 0.3 1.0 1 0 0 1 1 1 0 Ammonia monooxygenase Syntaxin_2 PF14523.6 ORF7530 - 0.0015 18.9 1.6 0.0017 18.7 1.6 1.1 1 0 0 1 1 1 1 Syntaxin-like protein DUF1438 PF07270.11 ORF7530 - 0.039 14.0 0.1 0.043 13.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1438) Tafi-CsgC PF10610.9 ORF74817 - 0.14 12.3 0.6 0.25 11.6 0.6 1.5 1 1 0 1 1 1 0 Thin aggregative fimbriae synthesis protein DUF4549 PF15082.6 ORF74613 - 0.15 11.8 2.5 0.16 11.8 0.8 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4549) Adeno_E1B_55K PF01696.17 ORF74582 - 0.28 9.8 9.3 0.31 9.7 9.3 1.0 1 0 0 1 1 1 0 Adenovirus EB1 55K protein / large t-antigen DUF4728 PF15860.5 ORF74365 - 0.027 15.1 0.1 0.027 15.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4728) Col_cuticle_N PF01484.17 ORF73857 - 0.21 11.6 1.5 0.27 11.3 1.5 1.3 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain vATP-synt_E PF01991.18 ORF73855 - 0.068 12.6 5.4 0.076 12.4 5.4 1.0 1 0 0 1 1 1 0 ATP synthase (E/31 kDa) subunit RTC PF01137.21 ORF73648 - 0.16 11.2 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 RNA 3'-terminal phosphate cyclase DUF1122 PF06557.11 ORF73626 - 0.029 13.8 0.0 0.03 13.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1122) ORC2 PF04084.14 ORF73626 - 0.071 12.0 0.2 0.075 11.9 0.2 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 2 DUF3454 PF11936.8 ORF73538 - 0.043 14.2 1.2 0.048 14.1 1.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3454) Arm-DNA-bind_2 PF12167.8 ORF73225 - 0.069 13.1 0.3 0.15 12.0 0.3 1.7 1 1 0 1 1 1 0 Arm DNA-binding domain COX15-CtaA PF02628.15 ORF7310 - 0.00014 21.1 0.0 0.00015 21.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein Peptidase_U4 PF03419.13 ORF71938 - 0.88 8.8 4.6 1 8.6 4.6 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Alpha-amylase PF00128.24 ORF71930 - 0.054 13.0 0.1 0.06 12.9 0.1 1.1 1 0 0 1 1 1 0 Alpha amylase, catalytic domain YrbL-PhoP_reg PF10707.9 ORF71623 - 0.36 10.3 6.2 0.38 10.3 6.2 1.0 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL SRP72 PF08492.12 ORF71623 - 1.9 9.0 6.9 2.9 8.4 6.9 1.3 1 0 0 1 1 1 0 SRP72 RNA-binding domain DUF4619 PF15398.6 ORF71623 - 6.3 6.2 10.7 6.6 6.1 10.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4619) DUF1307 PF06998.11 ORF71613 - 0.062 13.3 0.2 0.071 13.1 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1307) SOR_SNZ PF01680.17 ORF71558 - 0.067 13.0 0.0 0.072 12.9 0.0 1.0 1 0 0 1 1 1 0 SOR/SNZ family Prefoldin_2 PF01920.20 ORF71154 - 9.5e-05 22.3 4.6 0.00011 22.1 4.6 1.1 1 0 0 1 1 1 1 Prefoldin subunit LapA_dom PF06305.11 ORF71092 - 1.1 9.1 3.9 1.2 9.0 3.0 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DUF1361 PF07099.11 ORF70634 - 0.081 12.9 0.6 0.089 12.8 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1361) DUF5346 PF17281.2 ORF7007 - 0.087 12.9 0.0 0.098 12.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5346) Retrotran_gag_2 PF14223.6 ORF69973 - 0.0038 16.9 0.2 0.004 16.8 0.2 1.1 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type Thioredoxin_7 PF13899.6 ORF69818 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like DUF1953 PF09196.10 ORF69405 - 0.037 13.9 0.1 0.047 13.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1953) DUF1644 PF07800.12 ORF6906 - 0.05 13.7 4.0 0.054 13.6 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1644) Cpta_toxin PF07254.12 ORF69017 - 0.052 13.5 1.1 0.078 13.0 1.1 1.5 1 1 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system TNFR_16_TM PF18422.1 ORF69017 - 0.057 13.4 0.2 0.057 13.4 0.2 1.6 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain UL11 PF11094.8 ORF68788 - 0.071 13.0 2.2 0.11 12.5 2.2 1.4 1 1 0 1 1 1 0 Membrane-associated tegument protein DDE_Tnp_4 PF13359.6 ORF68673 - 0.076 12.7 0.0 0.077 12.7 0.0 1.0 1 0 0 1 1 1 0 DDE superfamily endonuclease Ring_hydroxyl_B PF00866.18 ORF68222 - 0.04 14.0 0.5 0.04 14.0 0.5 1.1 1 0 0 1 1 1 0 Ring hydroxylating beta subunit Uteroglobin PF01099.17 ORF68137 - 0.12 12.8 0.1 0.14 12.5 0.1 1.1 1 0 0 1 1 1 0 Uteroglobin family zf-primase PF09329.11 ORF68116 - 0.044 13.6 0.0 0.066 13.0 0.0 1.4 1 0 0 1 1 1 0 Primase zinc finger DUF2458 PF10454.9 ORF67480 - 0.039 13.6 3.8 0.043 13.5 3.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2458) TMF_DNA_bd PF12329.8 ORF67480 - 0.086 12.9 6.4 0.1 12.6 6.4 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Desulfoferrod_N PF06397.12 ORF67473 - 0.1 12.2 0.2 6.4 6.5 0.1 2.1 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain DUF3772 PF12607.8 ORF67174 - 0.0046 16.7 0.1 0.0062 16.3 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3772) FUSC-like PF12805.7 ORF67088 - 0.089 11.9 0.8 0.082 12.0 0.8 1.0 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Thioredoxin_7 PF13899.6 ORF66331 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like SLATT_5 PF18160.1 ORF66185 - 0.015 14.7 0.5 0.016 14.5 0.5 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 SLATT_5 PF18160.1 ORF66095 - 1.2 8.5 3.5 1.2 8.4 3.5 1.0 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 Pex24p PF06398.11 ORF65873 - 0.21 10.5 0.3 0.23 10.4 0.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF4162 PF13732.6 ORF65201 - 0.12 13.1 0.0 0.14 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) Brr6_like_C_C PF10104.9 ORF64292 - 0.28 10.9 1.5 0.3 10.9 1.5 1.1 1 0 0 1 1 1 0 Di-sulfide bridge nucleocytoplasmic transport domain TMEM169 PF15052.6 ORF64262 - 0.0095 16.1 1.8 0.01 16.0 1.8 1.0 1 0 0 1 1 1 1 TMEM169 protein family DPM3 PF08285.11 ORF64262 - 0.31 11.2 2.9 0.35 11.1 2.9 1.0 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Kunitz_BPTI PF00014.23 ORF64021 - 0.3 11.3 4.3 0.087 13.1 1.3 1.7 2 0 0 2 2 2 0 Kunitz/Bovine pancreatic trypsin inhibitor domain Rota_NS53 PF00981.17 ORF63591 - 0.0016 17.4 1.4 0.0017 17.4 1.4 1.0 1 0 0 1 1 1 1 Rotavirus RNA-binding Protein 53 (NS53) DUF438 PF04282.13 ORF61757 - 0.046 13.7 0.0 0.053 13.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF438) Peptidase_C69 PF03577.15 ORF61387 - 0.25 10.2 0.0 0.28 10.0 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C69 Cytochrome_B PF00033.19 ORF60765 - 0.027 14.3 0.3 0.029 14.2 0.3 1.0 1 0 0 1 1 1 0 Cytochrome b/b6/petB Lactamase_B_3 PF13483.6 ORF60765 - 0.035 14.0 0.0 0.038 13.9 0.0 1.0 1 0 0 1 1 1 0 Beta-lactamase superfamily domain S_100 PF01023.19 ORF60520 - 0.036 13.8 0.2 0.053 13.2 0.2 1.2 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain AMO PF02461.16 ORF60309 - 0.02 14.7 0.3 0.02 14.7 0.3 1.0 1 0 0 1 1 1 0 Ammonia monooxygenase UPF0506 PF11703.8 ORF60167 - 0.022 15.2 9.6 0.024 15.0 7.4 1.8 1 1 0 1 1 1 0 UPF0506 PGM_PMM_III PF02880.16 ORF60167 - 0.075 13.2 0.0 0.088 13.0 0.0 1.1 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Zn_clus PF00172.18 ORF60167 - 0.17 12.0 11.0 9.7 6.4 11.0 2.2 1 1 0 1 1 1 0 Fungal Zn(2)-Cys(6) binuclear cluster domain Dickkopf_N PF04706.12 ORF60167 - 2.3 8.7 11.2 2.9 8.5 2.1 2.1 1 1 1 2 2 2 0 Dickkopf N-terminal cysteine-rich region 23S_rRNA_IVP PF05635.11 ORF60070 - 0.044 14.1 0.1 0.054 13.8 0.1 1.1 1 0 0 1 1 1 0 23S rRNA-intervening sequence protein rve_3 PF13683.6 ORF59637 - 2e-12 46.7 0.1 2.4e-12 46.5 0.1 1.1 1 0 0 1 1 1 1 Integrase core domain HJURP_C PF12347.8 ORF5901 - 0.066 13.3 0.8 0.15 12.1 0.0 1.7 2 0 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat ATP1G1_PLM_MAT8 PF02038.16 ORF5892 - 0.041 13.3 0.0 0.067 12.6 0.0 1.4 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family Il13Ra_Ig PF18001.1 ORF58689 - 0.026 14.6 0.0 0.027 14.6 0.0 1.1 1 0 0 1 1 1 0 Interleukin-13 receptor subunit alpha Ig-like domain DCAF15_WD40 PF14939.6 ORF57941 - 0.062 13.0 0.2 0.064 12.9 0.2 1.0 1 0 0 1 1 1 0 DDB1-and CUL4-substrate receptor 15, WD repeat DUF3561 PF12084.8 ORF5789 - 0.056 13.5 0.4 0.065 13.3 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3561) Pannexin_like PF12534.8 ORF5789 - 0.15 11.1 3.1 0.17 10.9 3.1 1.0 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 HJURP_C PF12347.8 ORF57889 - 0.066 13.3 0.8 0.15 12.1 0.0 1.7 2 0 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat HTH_38 PF13936.6 ORF57632 - 0.22 11.3 1.9 2 8.2 0.1 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain Tti2 PF10521.9 ORF5756 - 0.12 11.9 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 Tti2 family HTH_34 PF13601.6 ORF57490 - 0.091 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain Pkinase PF00069.25 ORF5735 - 0.0013 18.1 0.3 0.0014 18.1 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Thionin PF00321.17 ORF57268 - 0.007 16.8 0.6 0.014 15.9 0.6 1.5 1 0 0 1 1 1 1 Plant thionin Homeodomain PF00046.29 ORF56920 - 0.049 13.5 0.2 0.049 13.5 0.2 1.5 2 0 0 2 2 2 0 Homeodomain Cadherin_tail PF15974.5 ORF56605 - 0.15 12.4 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region EMC3_TMCO1 PF01956.16 ORF56486 - 0.13 12.0 2.0 0.13 12.0 2.0 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Rhomboid_N PF12122.8 ORF56486 - 0.13 12.5 1.5 0.17 12.1 1.5 1.3 1 1 0 1 1 1 0 Cytoplasmic N-terminal domain of rhomboid serine protease PhoU PF01895.19 ORF56117 - 0.042 14.3 0.4 0.76 10.3 0.1 1.9 1 1 1 2 2 2 0 PhoU domain DUF4515 PF14988.6 ORF55987 - 0.015 15.1 7.3 0.015 15.1 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4515) XhlA PF10779.9 ORF55987 - 0.14 12.4 1.3 0.2 11.9 1.3 1.3 1 0 0 1 1 1 0 Haemolysin XhlA MIX PF18529.1 ORF54875 - 0.31 10.7 1.9 0.32 10.7 1.9 1.1 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins Auxin_inducible PF02519.14 ORF54826 - 0.027 14.6 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 Auxin responsive protein XTBD PF11952.8 ORF54061 - 0.019 14.7 0.8 0.024 14.4 0.8 1.2 1 0 0 1 1 1 0 XRN-Two Binding Domain, XTBD UPF0506 PF11703.8 ORF53910 - 0.73 10.3 11.1 0.99 9.8 10.0 1.8 1 1 0 1 1 1 0 UPF0506 HTH_Tnp_4 PF13613.6 ORF53541 - 0.069 12.9 0.2 0.33 10.7 0.0 2.0 2 1 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease HTH_Tnp_4 PF13613.6 ORF53151 - 0.069 12.9 0.2 0.33 10.7 0.0 2.0 2 1 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease TFIIB PF00382.19 ORF53129 - 0.051 13.6 0.2 0.074 13.1 0.2 1.3 1 0 0 1 1 1 0 Transcription factor TFIIB repeat CAAP1 PF15335.6 ORF53037 - 0.12 13.0 0.0 0.18 12.3 0.0 1.4 1 1 0 1 1 1 0 Caspase activity and apoptosis inhibitor 1 Reprolysin PF01421.19 ORF52985 - 0.095 12.6 0.1 0.1 12.5 0.1 1.0 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease WRC PF08879.10 ORF52698 - 0.041 13.6 0.0 0.067 12.9 0.0 1.4 1 0 0 1 1 1 0 WRC Chromadorea_ALT PF05535.12 ORF52414 - 0.021 15.0 1.1 0.031 14.5 1.1 1.3 1 0 0 1 1 1 0 Chromadorea ALT protein CutC PF03932.14 ORF51918 - 0.17 11.4 0.2 0.17 11.4 0.2 1.0 1 0 0 1 1 1 0 CutC family I-EGF_1 PF18372.1 ORF51095 - 0.19 11.9 1.2 0.28 11.3 1.2 1.3 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 Polo_box_2 PF18531.1 ORF50972 - 0.045 13.9 0.4 0.049 13.7 0.4 1.1 1 0 0 1 1 1 0 Polo box domain MIX PF18529.1 ORF50197 - 0.31 10.7 1.9 0.32 10.7 1.9 1.1 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins zf-C5HC2 PF02928.16 ORF49859 - 0.22 11.9 7.2 0.31 11.5 7.2 1.4 1 1 0 1 1 1 0 C5HC2 zinc finger Defensin_4 PF07936.12 ORF49651 - 0.0031 17.4 2.0 0.0031 17.4 2.0 1.5 2 0 0 2 2 2 1 Potassium-channel blocking toxin UPF0731 PF14982.6 ORF49651 - 0.1 12.8 1.3 0.13 12.5 1.3 1.2 1 0 0 1 1 1 0 UPF0731 family DUF4468 PF14730.6 ORF49562 - 0.06 13.7 0.1 0.065 13.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold Sirohm_synth_M PF14824.6 ORF47915 - 0.49 9.9 4.0 0.91 9.0 0.1 2.4 2 0 0 2 2 2 0 Sirohaem biosynthesis protein central Trehalose_recp PF06151.13 ORF47656 - 0.11 11.1 3.8 0.12 10.9 3.8 1.0 1 0 0 1 1 1 0 Trehalose receptor DUF3069 PF11269.8 ORF47314 - 0.043 14.1 1.6 0.046 14.0 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3069) Abhydrolase_7 PF12715.7 ORF47314 - 0.053 12.8 0.6 0.056 12.7 0.6 1.0 1 0 0 1 1 1 0 Abhydrolase family DUF1126 PF06565.12 ORF47270 - 0.1 12.4 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 DUF1126 PH-like domain B PF02216.16 ORF47270 - 0.17 11.9 1.8 1.3 9.0 0.6 2.4 1 1 1 2 2 2 0 B domain SSPI PF14098.6 ORF46637 - 0.051 13.7 0.2 0.08 13.1 0.2 1.3 1 0 0 1 1 1 0 Small, acid-soluble spore protein I MCD_N PF17408.2 ORF46637 - 0.12 12.5 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain ALG11_N PF15924.5 ORF46155 - 0.058 13.4 0.6 0.063 13.3 0.6 1.0 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus E1-E2_ATPase PF00122.20 ORF45825 - 0.11 12.0 0.7 0.1 12.1 0.7 1.1 1 0 0 1 1 1 0 E1-E2 ATPase Regnase_1_C PF18561.1 ORF45483 - 0.081 12.7 0.5 0.13 12.0 0.5 1.4 1 0 0 1 1 1 0 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain AMO PF02461.16 ORF44981 - 0.02 14.7 0.3 0.02 14.7 0.3 1.0 1 0 0 1 1 1 0 Ammonia monooxygenase S_2TMBeta PF18153.1 ORF43998 - 0.57 9.9 5.3 0.62 9.8 5.3 1.0 1 0 0 1 1 1 0 SMODS-associating 2TM, beta-strand rich effector domain Auxin_inducible PF02519.14 ORF43702 - 0.027 14.6 0.1 0.027 14.6 0.1 1.2 1 0 0 1 1 1 0 Auxin responsive protein DUF5097 PF17020.5 ORF43692 - 0.022 15.1 0.1 0.025 14.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5097) Prok-TraM PF09228.10 ORF43619 - 0.04 14.3 0.1 0.045 14.1 0.1 1.1 1 0 0 1 1 1 0 Prokaryotic Transcriptional repressor TraM AMO PF02461.16 ORF43445 - 0.02 14.7 0.3 0.02 14.7 0.3 1.0 1 0 0 1 1 1 0 Ammonia monooxygenase Gemini_BL1 PF00845.19 ORF42704 - 0.057 13.0 0.1 0.057 13.0 0.1 1.0 1 0 0 1 1 1 0 Geminivirus BL1 movement protein PAP_central PF04928.17 ORF41411 - 0.25 10.3 0.5 0.25 10.3 0.5 1.0 1 0 0 1 1 1 0 Poly(A) polymerase central domain TMEM82 PF15816.5 ORF40604 - 0.015 14.3 1.0 0.015 14.3 1.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 82 IQ PF00612.27 ORF4044 - 5.3e-06 25.8 0.1 7.1e-06 25.4 0.1 1.2 1 0 0 1 1 1 1 IQ calmodulin-binding motif MORN PF02493.20 ORF399 - 1.1e-12 47.0 9.3 1.8e-06 27.5 0.3 3.4 4 0 0 4 4 4 2 MORN repeat DUF3155 PF11352.8 ORF39483 - 0.22 12.0 0.0 0.26 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3155) Peptidase_U4 PF03419.13 ORF38906 - 0.88 8.8 4.6 1 8.6 4.6 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA Hepcidin PF06446.12 ORF38868 - 0.28 11.6 4.8 0.63 10.5 4.8 1.7 1 1 0 1 1 1 0 Hepcidin DUF4672 PF15716.5 ORF38737 - 6.7 6.3 6.2 11 5.6 6.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) Inhibitor_Mig-6 PF11555.8 ORF38538 - 0.81 9.8 7.7 0.18 11.9 3.3 1.8 1 1 1 2 2 2 0 EGFR receptor inhibitor Mig-6 Zn_Tnp_IS91 PF14319.6 ORF38119 - 0.058 13.4 0.5 0.077 13.0 0.5 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain Thioredoxin_7 PF13899.6 ORF36723 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like DUF3649 PF12365.8 ORF36562 - 0.0059 16.3 0.8 0.0087 15.8 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3649) Rod_cone_degen PF15201.6 ORF36384 - 0.08 13.0 0.2 0.11 12.6 0.2 1.2 1 0 0 1 1 1 0 Progressive rod-cone degeneration zf-RRPl_C4 PF17026.5 ORF36181 - 0.018 15.1 1.3 0.021 14.9 1.3 1.0 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type zf-CCHH PF10283.9 ORF34982 - 0.31 11.1 1.2 0.43 10.6 1.2 1.2 1 0 0 1 1 1 0 PBZ domain Herpes_UL35 PF04496.12 ORF33288 - 0.15 12.4 0.0 0.17 12.2 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL35 family Phage_G PF02306.15 ORF33274 - 0.1 12.3 0.5 0.11 12.2 0.5 1.1 1 0 0 1 1 1 0 Major spike protein (G protein) DUF3139 PF11337.8 ORF33069 - 0.02 15.5 0.2 0.024 15.3 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) Peptidase_U4 PF03419.13 ORF3285 - 0.88 8.8 4.6 1 8.6 4.6 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA OPA3 PF07047.12 ORF3225 - 0.18 11.6 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Optic atrophy 3 protein (OPA3) LapA_dom PF06305.11 ORF31880 - 1.1 9.1 3.9 1.2 9.0 3.0 1.5 1 1 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Gemini_C4 PF01492.17 ORF31597 - 0.14 12.1 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 Geminivirus C4 protein zf-CDGSH PF09360.10 ORF31521 - 0.46 10.7 5.9 0.15 12.3 2.7 2.1 1 1 0 1 1 1 0 Iron-binding zinc finger CDGSH type DUF2967 PF11179.8 ORF31179 - 0.12 10.4 0.0 0.12 10.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2967) DUF1196 PF06709.11 ORF31014 - 0.059 13.5 0.9 0.086 13.0 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1196) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks453.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks453.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks453.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks453.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3481 PF11980.8 ORF29811 - 0.14 11.9 2.3 0.17 11.6 2.3 1.2 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein COX7a PF02238.15 ORF28621 - 0.088 13.2 0.1 0.11 12.9 0.1 1.3 1 1 0 1 1 1 0 Cytochrome c oxidase subunit VII DUF3270 PF11674.8 ORF28424 - 0.042 14.0 3.5 0.047 13.9 3.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3270) Ring_hydroxyl_B PF00866.18 ORF2727 - 0.04 14.0 0.5 0.04 14.0 0.5 1.1 1 0 0 1 1 1 0 Ring hydroxylating beta subunit PHB_acc PF05233.13 ORF26583 - 0.0094 16.0 0.7 0.018 15.0 0.7 1.5 1 0 0 1 1 1 1 PHB accumulation regulatory domain DUF5097 PF17020.5 ORF25918 - 0.022 15.1 0.1 0.025 14.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5097) DUF840 PF05801.11 ORF25758 - 0.13 12.4 0.0 0.13 12.4 0.0 1.0 1 0 0 1 1 1 0 Lagovirus protein of unknown function (DUF840) HTH_39 PF14090.6 ORF25677 - 0.055 13.2 0.1 0.093 12.5 0.0 1.4 2 0 0 2 2 2 0 Helix-turn-helix domain PNPase_C PF12111.8 ORF25282 - 0.12 11.9 0.9 0.2 11.1 0.9 1.4 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal UPF0139 PF03669.13 ORF24960 - 0.089 12.7 1.5 0.1 12.5 1.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) IBR PF01485.21 ORF24938 - 1.5e-05 25.1 3.2 1.6e-05 25.0 3.2 1.1 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain C1_4 PF07975.12 ORF24938 - 0.0025 18.0 2.3 0.0028 17.8 2.3 1.2 1 0 0 1 1 1 1 TFIIH C1-like domain zf-B_box PF00643.24 ORF24938 - 0.071 13.3 4.0 0.097 12.8 4.0 1.3 1 0 0 1 1 1 0 B-box zinc finger Big_11 PF18200.1 ORF24737 - 0.16 11.9 0.0 0.22 11.4 0.0 1.2 1 1 0 1 1 1 0 Bacterial Ig-like domain Ribosomal_L44 PF00935.19 ORF24710 - 0.14 12.6 1.1 0.17 12.4 1.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L44 Gp49 PF05973.14 ORF24530 - 0.1 12.8 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 Phage derived protein Gp49-like (DUF891) DUF3399 PF11879.8 ORF24516 - 0.18 12.2 8.2 0.19 12.0 8.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3399) PARP PF00644.20 ORF24464 - 0.077 12.6 0.2 0.077 12.6 0.2 1.1 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain HTH_38 PF13936.6 ORF24392 - 0.22 11.3 1.9 2 8.2 0.1 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain HHV-1_VABD PF16852.5 ORF24261 - 0.051 13.6 1.5 0.081 12.9 1.5 1.4 1 1 0 1 1 1 0 Herpes viral adaptor-to-host cellular mRNA binding domain DUF4519 PF15012.6 ORF23473 - 0.22 11.7 3.3 0.39 10.9 1.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4519) PEP-utilizers_C PF02896.18 ORF23434 - 6.7e-12 45.1 0.0 7.1e-12 45.0 0.0 1.0 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PTS_2-RNA PF01885.16 ORF23250 - 8.4e-05 22.7 0.1 9.8e-05 22.5 0.1 1.1 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Afaf PF15339.6 ORF22282 - 0.45 10.2 1.9 0.45 10.2 1.9 1.0 1 0 0 1 1 1 0 Acrosome formation-associated factor DUF2768 PF10966.8 ORF21342 - 0.059 13.8 5.8 0.087 13.3 5.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2768) DUF4516 PF14990.6 ORF21208 - 0.2 11.4 2.7 0.31 10.8 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) CutC PF03932.14 ORF21093 - 0.17 11.4 0.2 0.17 11.4 0.2 1.0 1 0 0 1 1 1 0 CutC family KxDL PF10241.9 ORF2085 - 0.046 14.0 4.7 0.051 13.9 4.7 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein DUF2826 PF11442.8 ORF20539 - 0.07 13.0 0.1 0.07 13.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2826) zf-C2H2 PF00096.26 ORF20456 - 0.011 16.2 4.6 2.1 9.0 0.7 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type BAMBI PF06211.12 ORF20204 - 0.21 11.9 0.9 0.21 11.9 0.9 2.5 1 1 1 2 2 2 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain DUF5637 PF18687.1 ORF20204 - 4.5 7.3 19.3 1.4 9.0 8.3 2.5 2 1 1 3 3 3 0 Family of unknown function (DUF5637) zf-CCHC PF00098.23 ORF19700 - 0.0053 16.8 3.6 0.0053 16.8 3.6 2.4 3 0 0 3 3 3 1 Zinc knuckle zf-CCHC_4 PF14392.6 ORF19700 - 0.05 13.3 1.9 0.073 12.8 1.9 1.3 1 0 0 1 1 1 0 Zinc knuckle Peptidase_U4 PF03419.13 ORF19528 - 0.88 8.8 4.6 1 8.6 4.6 1.0 1 0 0 1 1 1 0 Sporulation factor SpoIIGA SK_channel PF03530.14 ORF19331 - 0.045 13.7 1.2 0.048 13.7 1.2 1.0 1 0 0 1 1 1 0 Calcium-activated SK potassium channel DUF2753 PF10952.8 ORF18910 - 0.059 13.5 0.6 0.069 13.3 0.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2753) SOR_SNZ PF01680.17 ORF17924 - 0.067 13.0 0.0 0.072 12.9 0.0 1.0 1 0 0 1 1 1 0 SOR/SNZ family vWF_A PF12450.8 ORF17464 - 0.01 15.8 0.1 0.017 15.1 0.1 1.3 1 0 0 1 1 1 0 von Willebrand factor DUF3810 PF12725.7 ORF17464 - 0.038 13.4 0.9 0.041 13.2 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) HTH_Mga PF08280.11 ORF1738 - 0.12 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Pkinase PF00069.25 ORF17284 - 3.4e-07 29.9 0.0 4.1e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain HTH_26 PF13443.6 ORF16775 - 0.0075 16.7 0.4 0.23 11.9 0.0 2.0 2 0 0 2 2 2 2 Cro/C1-type HTH DNA-binding domain DDE_Tnp_1_2 PF13586.6 ORF16421 - 0.037 14.4 0.4 0.042 14.2 0.4 1.1 1 0 0 1 1 1 0 Transposase DDE domain Feld-I_B PF09252.10 ORF16026 - 0.05 13.6 0.0 0.058 13.4 0.0 1.1 1 0 0 1 1 1 0 Allergen Fel d I-B chain DUF4801 PF16059.5 ORF152643 - 0.053 13.5 0.3 0.067 13.2 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4801) PLAC PF08686.11 ORF152443 - 0.074 13.8 0.4 0.074 13.8 0.4 1.7 2 0 0 2 2 2 0 PLAC (protease and lacunin) domain MoeA_N PF03453.17 ORF152265 - 0.2 11.4 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 MoeA N-terminal region (domain I and II) Lectin_C_term PF18022.1 ORF151885 - 0.031 14.7 0.1 0.033 14.6 0.1 1.0 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin C-terminal domain Astro_capsid_p2 PF16580.5 ORF151820 - 0.11 11.9 0.2 0.12 11.8 0.2 1.0 1 0 0 1 1 1 0 C-terminal tail of astrovirus capsid projection or spike PPDK_N PF01326.19 ORF151533 - 0.12 11.6 0.1 0.12 11.6 0.1 1.0 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DNA_RNApol_7kD PF03604.13 ORF150827 - 1.2e-14 53.7 6.2 1.5e-14 53.3 6.2 1.2 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit A2L_zn_ribbon PF08792.10 ORF150827 - 0.00031 20.4 1.6 0.00058 19.5 1.6 1.4 1 0 0 1 1 1 1 A2L zinc ribbon domain HypA PF01155.19 ORF150827 - 0.0027 17.7 0.2 0.0028 17.7 0.2 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_13 PF09855.9 ORF150827 - 0.006 16.7 2.1 0.035 14.3 0.2 2.1 1 1 1 2 2 2 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zinc_ribbon_10 PF10058.9 ORF150827 - 0.0077 15.9 0.2 0.081 12.7 0.0 2.1 2 0 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein NinF PF05810.12 ORF150827 - 0.011 15.6 0.2 0.012 15.4 0.2 1.2 1 0 0 1 1 1 0 NinF protein Zn-ribbon_8 PF09723.10 ORF150827 - 0.011 15.8 0.5 0.021 14.9 0.5 1.4 1 0 0 1 1 1 0 Zinc ribbon domain Tnp_zf-ribbon_2 PF13842.6 ORF150827 - 0.013 16.3 2.6 0.78 10.6 0.6 2.2 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-RING_7 PF02591.15 ORF150827 - 0.07 13.3 3.0 0.77 10.0 0.1 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain Rubredoxin_2 PF18073.1 ORF150827 - 0.12 12.1 3.7 3.1 7.6 0.4 2.1 2 0 0 2 2 2 0 Rubredoxin metal binding domain FAM24 PF15193.6 ORF149464 - 0.078 13.8 0.4 0.1 13.4 0.4 1.2 1 0 0 1 1 1 0 FAM24 family DUF2757 PF10955.8 ORF149350 - 0.019 15.2 0.0 0.026 14.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2757) PIG-P PF08510.12 ORF149304 - 0.018 15.0 1.0 0.02 14.8 1.0 1.1 1 0 0 1 1 1 0 PIG-P Rpp20 PF12328.8 ORF148459 - 0.16 11.9 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P DUF438 PF04282.13 ORF148340 - 0.046 13.7 0.0 0.053 13.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF438) Abhydrolase_1 PF00561.20 ORF147546 - 0.032 13.9 0.1 0.032 13.9 0.1 1.0 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF3981 PF13139.6 ORF147207 - 0.014 15.8 0.1 0.024 15.0 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3981) S1FA PF04689.13 ORF146672 - 5.2 7.3 6.1 8.3 6.6 6.1 1.4 1 1 0 1 1 1 0 DNA binding protein S1FA DUF3290 PF11694.8 ORF146475 - 0.038 14.0 1.0 0.038 14.0 1.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) Thioredoxin_7 PF13899.6 ORF146341 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like AKNA PF12443.8 ORF146251 - 0.071 13.8 0.4 0.085 13.5 0.4 1.2 1 0 0 1 1 1 0 AT-hook-containing transcription factor SCF PF02404.15 ORF145796 - 0.13 11.6 3.1 0.17 11.2 3.1 1.2 1 0 0 1 1 1 0 Stem cell factor WRW PF10206.9 ORF145641 - 6.8 7.1 7.7 27 5.2 7.7 1.7 1 1 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f FRB_dom PF08771.11 ORF145242 - 0.14 12.6 0.1 0.18 12.2 0.1 1.2 1 0 0 1 1 1 0 FKBP12-rapamycin binding domain I-EGF_1 PF18372.1 ORF144834 - 0.19 11.9 1.2 0.28 11.3 1.2 1.3 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 PM0188 PF11477.8 ORF143973 - 0.12 11.5 0.0 0.12 11.5 0.0 1.0 1 0 0 1 1 1 0 Sialyltransferase PMO188 Prok-TraM PF09228.10 ORF143944 - 0.0067 16.8 1.2 0.011 16.1 1.2 1.4 1 1 0 1 1 1 1 Prokaryotic Transcriptional repressor TraM DUF1533 PF07550.11 ORF143776 - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1533) DUF5133 PF17196.4 ORF14370 - 0.027 14.7 0.1 0.045 13.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF5133) Alpha_E3_glycop PF01563.16 ORF143422 - 0.045 13.8 0.7 0.12 12.5 0.1 1.9 2 0 0 2 2 2 0 Alphavirus E3 glycoprotein TIM21 PF08294.11 ORF143361 - 0.04 13.8 0.2 0.04 13.8 0.2 1.0 1 0 0 1 1 1 0 TIM21 Mso1_C PF14477.6 ORF143361 - 0.051 14.0 1.7 0.076 13.4 1.7 1.3 1 1 0 1 1 1 0 Membrane-polarising domain of Mso1 IMPa_helical PF18642.1 ORF143361 - 0.072 13.5 0.4 0.082 13.3 0.4 1.0 1 0 0 1 1 1 0 Immunomodulating metalloprotease helical domain DUF3704 PF12488.8 ORF143065 - 0.24 11.1 2.3 2.5 7.8 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3704) Cathelicidins PF00666.17 ORF142839 - 0.04 14.2 0.1 0.04 14.2 0.1 1.0 1 0 0 1 1 1 0 Cathelicidin zf-P11 PF03854.14 ORF142813 - 0.14 11.9 2.5 0.17 11.5 2.5 1.1 1 0 0 1 1 1 0 P-11 zinc finger DUF5133 PF17196.4 ORF142579 - 0.027 14.7 0.1 0.045 13.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF5133) Caleosin PF05042.13 ORF141322 - 0.13 12.2 0.0 0.15 12.0 0.0 1.0 1 0 0 1 1 1 0 Caleosin related protein ApbA_C PF08546.11 ORF14113 - 0.056 13.6 0.0 0.065 13.4 0.0 1.1 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA C terminal Invas_SpaK PF03519.14 ORF141059 - 0.033 14.2 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 Invasion protein B family Adeno_E3 PF06040.11 ORF140491 - 0.11 12.6 0.4 0.16 12.1 0.4 1.3 1 0 0 1 1 1 0 Adenovirus E3 protein CTP_transf_1 PF01148.20 ORF140020 - 0.057 13.2 2.1 0.06 13.1 2.1 1.0 1 0 0 1 1 1 0 Cytidylyltransferase family DUF4870 PF09685.10 ORF140020 - 0.067 13.3 1.3 0.072 13.2 1.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4870) Trp_oprn_chp PF09534.10 ORF140020 - 0.069 12.9 7.2 0.074 12.8 7.2 1.0 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) HTH_19 PF12844.7 ORF139705 - 0.072 13.1 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Glyco_transf_18 PF15024.6 ORF138916 - 0.73 8.4 7.4 0.76 8.3 7.4 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 18 Thioredoxin_7 PF13899.6 ORF138635 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Gemini_AL2 PF01440.16 ORF138039 - 0.024 15.1 0.3 0.024 15.1 0.3 1.1 1 0 0 1 1 1 0 Geminivirus AL2 protein Ring_hydroxyl_B PF00866.18 ORF137961 - 0.04 14.0 0.5 0.04 14.0 0.5 1.1 1 0 0 1 1 1 0 Ring hydroxylating beta subunit Thioredoxin_7 PF13899.6 ORF137814 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Glyco_transf_52 PF07922.11 ORF13776 - 0.028 13.7 0.5 0.03 13.6 0.5 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 52 DUF5357 PF17310.2 ORF137541 - 0.16 10.5 0.0 0.16 10.5 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) PriA_C PF18074.1 ORF137119 - 0.078 13.8 0.0 0.088 13.6 0.0 1.1 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain Cmc1 PF08583.10 ORF13697 - 0.00081 19.4 3.1 0.00098 19.1 3.1 1.2 1 0 0 1 1 1 1 Cytochrome c oxidase biogenesis protein Cmc1 like CX9C PF16860.5 ORF13697 - 0.0012 18.8 2.6 0.002 18.1 2.4 1.6 1 1 0 1 1 1 1 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, CHCH PF06747.13 ORF13697 - 0.0055 16.8 1.1 0.018 15.2 1.0 1.9 1 1 0 1 1 1 1 CHCH domain Ndufs5 PF10200.9 ORF13697 - 0.038 14.2 0.3 0.038 14.2 0.3 1.1 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFS5-15kDa Prefoldin_2 PF01920.20 ORF135725 - 9.5e-05 22.3 4.6 0.00011 22.1 4.6 1.1 1 0 0 1 1 1 1 Prefoldin subunit LptF_LptG PF03739.14 ORF135244 - 1.4 7.7 6.8 1.5 7.6 6.8 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Fijivirus_P9-2 PF06837.11 ORF135244 - 10 5.5 12.4 11 5.4 12.4 1.1 1 0 0 1 1 1 0 Fijivirus P9-2 protein DUF295 PF03478.18 ORF135098 - 0.066 12.8 0.3 0.083 12.5 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF295) DUF4131 PF13567.6 ORF134913 - 3.9 7.1 6.1 4.2 7.0 6.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) ETRAMP PF09716.10 ORF134757 - 0.0015 18.6 3.3 0.0017 18.4 3.3 1.1 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) DUF629 PF04780.12 ORF134757 - 0.014 14.0 0.1 0.015 13.8 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF629) DUF4094 PF13334.6 ORF134757 - 0.016 15.6 0.6 0.018 15.4 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) DUF5053 PF16476.5 ORF133258 - 0.048 13.3 0.0 0.29 10.8 0.0 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF5053) TMEMspv1-c74-12 PF11044.8 ORF132925 - 5.5 7.1 5.2 2.1 8.4 2.2 1.7 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein ChpXY PF10216.9 ORF132681 - 0.066 12.3 0.1 0.067 12.3 0.1 1.0 1 0 0 1 1 1 0 CO2 hydration protein (ChpXY) GxDLY PF14607.6 ORF132681 - 0.12 12.1 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type TMEM189_B_dmain PF10520.9 ORF13247 - 0.032 14.3 1.5 0.031 14.4 1.5 1.2 1 0 0 1 1 1 0 B domain of TMEM189, localisation domain BLYB PF05289.11 ORF132325 - 0.0065 16.7 1.8 0.0071 16.6 1.8 1.0 1 0 0 1 1 1 1 Borrelia hemolysin accessory protein DUF4570 PF15134.6 ORF132325 - 0.2 11.7 6.3 0.22 11.6 6.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4570) DivIC PF04977.15 ORF132325 - 1.1 9.1 7.3 0.55 10.0 3.8 1.9 1 1 1 2 2 2 0 Septum formation initiator DUF4349 PF14257.6 ORF132151 - 0.032 13.7 1.8 0.038 13.4 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) HSBP1 PF06825.12 ORF132151 - 0.061 13.2 1.8 0.26 11.2 1.8 1.9 1 1 0 1 1 1 0 Heat shock factor binding protein 1 XhlA PF10779.9 ORF132151 - 0.061 13.5 4.9 0.071 13.3 4.9 1.1 1 0 0 1 1 1 0 Haemolysin XhlA FlaC_arch PF05377.11 ORF132151 - 0.068 13.6 6.2 0.38 11.2 6.2 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Fe_dep_repr_C PF02742.15 ORF132151 - 0.085 13.0 0.2 2.8 8.1 0.1 2.0 2 0 0 2 2 2 0 Iron dependent repressor, metal binding and dimerisation domain MtrB PF05440.12 ORF132151 - 0.1 13.0 0.7 0.12 12.8 0.7 1.3 1 1 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B DUF1664 PF07889.12 ORF132151 - 0.11 12.6 1.4 0.13 12.3 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF4201 PF13870.6 ORF131941 - 0.056 13.2 0.4 0.057 13.2 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) Prominin PF05478.11 ORF131351 - 0.022 12.7 0.3 0.022 12.7 0.3 1.0 1 0 0 1 1 1 0 Prominin AKNA PF12443.8 ORF131299 - 0.071 13.8 0.4 0.085 13.5 0.4 1.2 1 0 0 1 1 1 0 AT-hook-containing transcription factor DUF5026 PF16429.5 ORF131298 - 0.15 12.2 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5026) Gla PF00594.20 ORF131159 - 0.023 14.9 0.8 0.032 14.4 0.8 1.3 1 0 0 1 1 1 0 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain Frizzled PF01534.17 ORF13052 - 0.036 13.1 0.1 0.037 13.1 0.1 1.0 1 0 0 1 1 1 0 Frizzled/Smoothened family membrane region TMIE PF16038.5 ORF13052 - 0.28 11.1 3.8 2.3 8.1 0.0 2.0 1 1 1 2 2 2 0 TMIE protein DUF2417 PF10329.9 ORF130266 - 0.077 12.4 0.6 0.086 12.2 0.6 1.0 1 0 0 1 1 1 0 Region of unknown function (DUF2417) AAA_26 PF13500.6 ORF128647 - 0.078 12.8 0.0 0.08 12.7 0.0 1.0 1 0 0 1 1 1 0 AAA domain Lysis_col PF02402.16 ORF128046 - 0.073 12.8 0.5 0.073 12.8 0.5 1.6 2 1 0 2 2 2 0 Lysis protein Phlebovirus_G1 PF07243.11 ORF127163 - 0.23 9.8 1.4 0.26 9.6 1.4 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Ribosomal_L18 PF17135.4 ORF126353 - 2e-23 82.8 1.9 2.2e-23 82.7 1.9 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Kunitz_BPTI PF00014.23 ORF126010 - 0.3 11.3 4.3 0.087 13.1 1.3 1.7 2 0 0 2 2 2 0 Kunitz/Bovine pancreatic trypsin inhibitor domain MetOD1 PF18546.1 ORF125677 - 0.041 13.8 0.6 0.051 13.5 0.6 1.1 1 0 0 1 1 1 0 Metanogen output domain 1 CsrA PF02599.16 ORF125400 - 2.3e-27 94.7 1.5 2.6e-27 94.5 1.5 1.0 1 0 0 1 1 1 1 Global regulator protein family S1 PF00575.23 ORF125400 - 0.031 14.6 0.6 0.16 12.3 0.4 1.8 1 1 1 2 2 2 0 S1 RNA binding domain RNA_pol_Rpc4 PF05132.14 ORF125203 - 0.0012 19.3 0.0 0.0013 19.2 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase III RPC4 Trehalose_recp PF06151.13 ORF12461 - 0.11 11.1 3.8 0.12 10.9 3.8 1.0 1 0 0 1 1 1 0 Trehalose receptor YbjN PF10722.9 ORF124360 - 0.041 13.9 0.2 0.047 13.8 0.2 1.1 1 0 0 1 1 1 0 Putative bacterial sensory transduction regulator Defensin_beta PF00711.19 ORF124077 - 0.022 14.8 0.1 0.038 14.0 0.1 1.4 1 0 0 1 1 1 0 Beta defensin RCC1_2 PF13540.6 ORF124028 - 0.024 14.4 0.0 0.037 13.8 0.0 1.3 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat Methyltransf_29 PF03141.16 ORF124028 - 0.21 10.1 0.0 0.23 9.9 0.0 1.0 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Cep57_CLD PF14073.6 ORF123320 - 0.13 12.3 0.3 0.12 12.4 0.3 1.1 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 UIM PF02809.20 ORF123297 - 0.77 9.8 3.8 0.96 9.5 0.7 2.3 2 0 0 2 2 2 0 Ubiquitin interaction motif CAAX_1 PF15895.5 ORF123228 - 0.082 12.8 0.4 0.088 12.7 0.4 1.1 1 0 0 1 1 1 0 CAAX box cerebral protein 1 DUF5561 PF17716.1 ORF123041 - 0.055 12.8 0.0 0.057 12.7 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5561) DUF5637 PF18687.1 ORF122881 - 4.7 7.3 8.6 1.9 8.5 0.4 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5637) Arrestin_N PF00339.29 ORF122720 - 0.11 12.6 0.0 0.11 12.6 0.0 1.0 1 0 0 1 1 1 0 Arrestin (or S-antigen), N-terminal domain ATP-synt_8 PF00895.20 ORF122204 - 0.074 13.5 0.6 0.1 13.1 0.6 1.2 1 0 0 1 1 1 0 ATP synthase protein 8 EVC2_like PF12297.8 ORF122204 - 0.19 10.4 1.0 0.2 10.3 1.0 1.0 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Herpes_UL21 PF03252.13 ORF120836 - 0.13 11.0 0.4 0.14 10.9 0.4 1.0 1 0 0 1 1 1 0 Herpesvirus UL21 Thioredoxin_7 PF13899.6 ORF120494 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like UL16 PF17622.2 ORF119390 - 0.037 13.7 0.1 0.039 13.6 0.1 1.1 1 0 0 1 1 1 0 Viral unique long protein 16 UPF0139 PF03669.13 ORF119079 - 0.089 12.7 1.5 0.1 12.5 1.5 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0139) Phage_terminase PF10668.9 ORF119071 - 0.03 14.3 0.1 5.7 7.0 0.1 2.1 2 0 0 2 2 2 0 Phage terminase small subunit SF3A3 PF16837.5 ORF118853 - 0.05 14.1 0.1 0.054 14.0 0.1 1.1 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 FliS PF02561.14 ORF118853 - 0.064 13.5 0.1 0.074 13.3 0.1 1.2 1 0 0 1 1 1 0 Flagellar protein FliS Beta_helix_2 PF18835.1 ORF118603 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Beta helix repeat of Inulin fructotransferase NADH-G_4Fe-4S_3 PF10588.9 ORF118397 - 0.83 9.2 6.8 1.3 8.6 6.8 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UL41A PF17591.2 ORF118164 - 0.035 14.2 0.2 0.04 14.0 0.2 1.1 1 0 0 1 1 1 0 Herpesvirus UL41A Trehalose_recp PF06151.13 ORF117746 - 0.11 11.1 3.8 0.12 10.9 3.8 1.0 1 0 0 1 1 1 0 Trehalose receptor AglB_L1 PF18079.1 ORF117613 - 0.094 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Archaeal glycosylation protein B long peripheral domain KxDL PF10241.9 ORF117386 - 0.018 15.3 4.9 0.02 15.2 4.9 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein TolA_bind_tri PF16331.5 ORF117386 - 0.029 14.4 0.8 0.053 13.6 0.8 1.6 1 1 0 1 1 1 0 TolA binding protein trimerisation CHD5 PF04420.14 ORF117386 - 0.18 11.7 2.0 0.18 11.7 2.0 1.1 1 0 0 1 1 1 0 CHD5-like protein CARD_2 PF16739.5 ORF116960 - 0.043 13.8 0.8 0.054 13.5 0.8 1.1 1 0 0 1 1 1 0 Caspase recruitment domain TetR PF13972.6 ORF116960 - 0.06 13.1 0.4 0.068 12.9 0.4 1.0 1 0 0 1 1 1 0 Bacterial transcriptional repressor Homeodomain PF00046.29 ORF116883 - 0.049 13.5 0.2 0.049 13.5 0.2 1.5 2 0 0 2 2 2 0 Homeodomain IBV_3A PF03617.13 ORF116413 - 0.063 13.3 0.0 0.072 13.1 0.0 1.2 1 0 0 1 1 1 0 IBV 3A protein DUF4485 PF14846.6 ORF116413 - 0.12 12.4 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4485) DUF1987 PF09345.10 ORF116413 - 0.14 11.9 0.0 0.14 11.8 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1987) DUF679 PF05078.12 ORF115390 - 0.039 13.9 0.2 0.04 13.9 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF679) Thioredoxin_7 PF13899.6 ORF115276 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like ArsB PF02040.15 ORF115033 - 0.056 12.8 3.2 0.06 12.7 3.2 1.0 1 0 0 1 1 1 0 Arsenical pump membrane protein Jiraiya PF15038.6 ORF114661 - 0.047 13.1 0.1 0.05 13.0 0.1 1.0 1 0 0 1 1 1 0 Jiraiya Thioredoxin_7 PF13899.6 ORF11389 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Ribosomal_L28 PF00830.19 ORF11357 - 0.059 13.6 0.3 0.1 12.8 0.2 1.4 1 1 0 1 1 1 0 Ribosomal L28 family Prominin PF05478.11 ORF113369 - 0.022 12.7 0.3 0.022 12.7 0.3 1.0 1 0 0 1 1 1 0 Prominin ECH_2 PF16113.5 ORF113353 - 7e-11 42.2 0.0 7.9e-11 42.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase MORN PF02493.20 ORF113043 - 7.5e-13 47.6 16.0 5.2e-06 26.0 2.9 3.1 3 0 0 3 3 3 3 MORN repeat Astro_capsid_p2 PF16580.5 ORF112967 - 0.11 11.9 0.2 0.12 11.8 0.2 1.0 1 0 0 1 1 1 0 C-terminal tail of astrovirus capsid projection or spike Ins134_P3_kin_N PF17927.1 ORF112833 - 0.015 15.7 0.0 0.017 15.5 0.0 1.1 1 0 0 1 1 1 0 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain CW_7 PF08230.11 ORF112217 - 0.043 13.6 0.3 0.07 12.9 0.3 1.3 1 0 0 1 1 1 0 CW_7 repeat Ribosomal_S20p PF01649.18 ORF111793 - 3.5e-18 66.0 4.2 3.8e-18 65.9 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S20 Terpene_synth_C PF03936.16 ORF111766 - 0.028 13.8 0.2 0.028 13.8 0.2 1.0 1 0 0 1 1 1 0 Terpene synthase family, metal binding domain DUF5409 PF17421.2 ORF111766 - 0.048 14.4 1.2 0.051 14.3 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5409) Thioredoxin_7 PF13899.6 ORF111597 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like DUF5592 PF17332.2 ORF110384 - 3.2 8.4 10.7 6.2 7.4 10.7 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5592) LEA_6 PF10714.9 ORF110342 - 0.17 12.0 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Late embryogenesis abundant protein 18 PCSK9_C3 PF18463.1 ORF109632 - 0.15 12.3 5.2 0.18 12.1 5.2 1.4 1 1 0 1 1 1 0 Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain Thioredoxin_7 PF13899.6 ORF108769 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Rpp20 PF12328.8 ORF108641 - 0.16 11.9 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P DUF716 PF04819.12 ORF108608 - 0.037 13.7 1.2 0.042 13.5 1.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF716) DUF4815 PF16075.5 ORF108514 - 0.027 12.8 0.0 0.029 12.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4815) Molybdop_Fe4S4 PF04879.16 ORF108479 - 3.1e-05 23.9 1.1 3.1e-05 23.9 1.1 1.5 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain TAT_signal PF10518.9 ORF108479 - 4.2e-05 23.2 1.2 6.5e-05 22.6 1.2 1.3 1 0 0 1 1 1 1 TAT (twin-arginine translocation) pathway signal sequence CytB6-F_Fe-S PF08802.10 ORF108479 - 0.035 14.1 0.1 0.056 13.5 0.1 1.2 1 0 0 1 1 1 0 Cytochrome B6-F complex Fe-S subunit Thioredoxin_7 PF13899.6 ORF108389 - 0.11 12.6 0.0 0.15 12.3 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like PulG PF11773.8 ORF107612 - 0.016 15.0 0.3 0.018 14.9 0.3 1.0 1 0 0 1 1 1 0 Type II secretory pathway pseudopilin FANCI_S3 PF14677.6 ORF107440 - 0.2 11.3 0.0 0.23 11.2 0.0 1.0 1 0 0 1 1 1 0 FANCI solenoid 3 Paramyxo_NS_C PF02725.14 ORF106968 - 0.21 11.7 0.0 0.23 11.6 0.0 1.0 1 0 0 1 1 1 0 Non-structural protein C SAYSvFN PF10260.9 ORF106389 - 0.12 12.3 2.1 0.14 12.1 2.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved domain (SAYSvFN) SSPI PF14098.6 ORF105439 - 0.051 13.7 0.2 0.08 13.1 0.2 1.3 1 0 0 1 1 1 0 Small, acid-soluble spore protein I MCD_N PF17408.2 ORF105439 - 0.12 12.5 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain Acyl_CoA_thio PF02551.15 ORF10497 - 0.08 12.8 0.0 0.088 12.7 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA thioesterase TSGP1 PF07771.11 ORF1047 - 0.24 11.5 6.2 0.29 11.3 6.2 1.1 1 0 0 1 1 1 0 Tick salivary peptide group 1 Ribosomal_L33 PF00471.20 ORF104392 - 3.4e-08 33.8 0.0 4.1e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L33 Toxin_2 PF00451.19 ORF102745 - 0.32 11.3 0.9 0.32 11.3 0.9 2.5 2 1 0 2 2 2 0 Scorpion short toxin, BmKK2 zf-RING_2 PF13639.6 ORF10189 - 2.2e-08 34.3 5.9 3e-08 33.8 5.9 1.2 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF10189 - 8.7e-08 32.3 6.9 1.4e-07 31.6 6.9 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF10189 - 1e-07 31.6 5.4 1.4e-07 31.2 5.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF10189 - 2.2e-05 24.4 1.2 2.9e-05 24.0 1.2 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF10189 - 0.00018 21.3 5.4 0.00026 20.8 5.4 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF10189 - 0.00038 20.3 1.6 0.00056 19.8 1.6 1.3 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF10189 - 0.0019 18.0 2.7 0.0026 17.6 2.7 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF10189 - 0.0043 16.6 1.4 0.0056 16.3 1.4 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 ORF10189 - 0.0078 16.2 1.3 0.013 15.5 1.3 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF10189 - 0.011 15.4 3.0 0.026 14.3 3.0 1.6 1 0 0 1 1 1 0 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF10189 - 0.022 14.6 1.8 0.028 14.3 1.8 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING-like PF08746.11 ORF10189 - 0.083 13.2 3.0 0.11 12.8 3.0 1.2 1 0 0 1 1 1 0 RING-like domain RINGv PF12906.7 ORF10189 - 0.14 12.3 2.2 0.18 11.9 1.6 1.5 2 0 0 2 2 2 0 RING-variant domain Rad50_zn_hook PF04423.14 ORF10189 - 0.15 12.0 0.1 0.2 11.5 0.1 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif Toxin_37 PF11415.8 ORF101191 - 0.073 12.9 6.2 0.11 12.4 6.2 1.3 1 0 0 1 1 1 0 Antifungal peptide termicin Death PF00531.22 ORF101083 - 0.023 14.8 0.1 1 9.6 0.0 2.0 1 1 1 2 2 2 0 Death domain SH3_4 PF06347.13 ORF101083 - 0.035 13.9 0.5 0.052 13.4 0.5 1.3 1 0 0 1 1 1 0 Bacterial SH3 domain HTH_38 PF13936.6 ORF100435 - 0.22 11.3 1.9 2 8.2 0.1 2.2 1 1 1 2 2 2 0 Helix-turn-helix domain DUF3778 PF12620.8 ORF100152 - 0.11 12.1 0.1 0.14 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3778) 2Fe-2S_Ferredox PF11591.8 NODE_90036_length_180_cov_0.827586_g82095_i0reverse_frame_1 - 0.2 11.5 1.3 0.54 10.2 1.3 1.7 1 1 0 1 1 1 0 Ferredoxin chloroplastic transit peptide Ral PF11058.8 NODE_90030_length_180_cov_0.827586_g82089_i0reverse_frame_1 - 0.071 12.7 0.1 0.092 12.3 0.1 1.2 1 0 0 1 1 1 0 Antirestriction protein Ral DUF4321 PF14209.6 NODE_90027_length_180_cov_0.827586_g82086_i0forward_frame_1 - 0.0071 16.2 1.6 0.0076 16.1 0.4 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4321) UDPG_MGDP_dh PF00984.19 NODE_90024_length_180_cov_0.827586_g82083_i0reverse_frame_1 - 0.012 15.8 0.0 0.012 15.8 0.0 1.0 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, central domain Dak1 PF02733.17 NODE_90024_length_180_cov_0.827586_g82083_i0forward_frame_1 - 0.034 13.1 0.0 0.034 13.1 0.0 1.0 1 0 0 1 1 1 0 Dak1 domain SHIPPO-rpt PF07004.12 NODE_90020_length_180_cov_0.875862_g82079_i0forward_frame_1 - 3.3 8.8 6.5 4.1 8.5 6.5 1.4 1 1 0 1 1 1 0 Sperm-tail PG-rich repeat PBP1_TM PF14812.6 NODE_90006_length_180_cov_0.965517_g82065_i0reverse_frame_1 - 0.12 12.8 0.6 0.18 12.2 0.4 1.4 1 1 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal PHD20L1_u1 PF16660.5 NODE_90004_length_180_cov_0.979310_g82063_i0forward_frame_1 - 0.061 14.1 0.0 0.066 14.0 0.0 1.1 1 0 0 1 1 1 0 PHD finger protein 20-like protein 1 GCV_T PF01571.21 NODE_90001_length_180_cov_0.986207_g82060_i0reverse_frame_1 - 4.1e-16 59.1 0.0 4.2e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain DUF5474 PF17568.2 NODE_89994_length_180_cov_1.013793_g82053_i0forward_frame_1 - 0.081 13.0 0.0 0.086 12.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5474) Phage_holin_4_2 PF04020.13 NODE_89989_length_180_cov_1.027586_g82048_i0forward_frame_1 - 0.0086 16.7 1.6 0.0099 16.5 1.6 1.1 1 0 0 1 1 1 1 Mycobacterial 4 TMS phage holin, superfamily IV STE PF02200.16 NODE_89986_length_180_cov_1.041379_g82045_i0reverse_frame_1 - 0.049 14.1 0.1 0.053 13.9 0.1 1.0 1 0 0 1 1 1 0 STE like transcription factor SPATA3 PF15662.5 NODE_89982_length_180_cov_1.062069_g82041_i0forward_frame_1 - 0.15 12.7 5.0 0.18 12.4 5.0 1.1 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family Fels1 PF05666.11 NODE_89974_length_180_cov_1.075862_g82033_i0reverse_frame_1 - 0.017 14.7 0.3 0.022 14.4 0.3 1.4 1 1 0 1 1 1 0 Fels-1 Prophage Protein-like MGTL PF17059.5 NODE_89972_length_180_cov_1.075862_g82031_i0forward_frame_1 - 0.38 10.6 1.5 12 5.9 0.0 2.5 2 0 0 2 2 2 0 MgtA leader peptide HD_5 PF13487.6 NODE_89952_length_180_cov_1.096552_g82011_i0reverse_frame_1 - 0.014 15.6 0.1 0.27 11.5 0.0 2.1 2 0 0 2 2 2 0 HD domain DUF3878 PF12994.7 NODE_89948_length_180_cov_1.096552_g82007_i0reverse_frame_1 - 0.11 12.0 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function, E. rectale Gene description (DUF3878) DUF4181 PF13789.6 NODE_89942_length_180_cov_1.096552_g82001_i0forward_frame_1 - 0.093 13.0 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) Vps39_2 PF10367.9 NODE_89932_length_180_cov_1.096552_g81991_i0reverse_frame_1 - 0.019 15.4 0.7 0.023 15.2 0.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 CD47 PF04549.14 NODE_89932_length_180_cov_1.096552_g81991_i0forward_frame_1 - 0.012 15.8 5.1 0.013 15.7 5.1 1.1 1 0 0 1 1 1 0 CD47 transmembrane region Pex24p PF06398.11 NODE_89932_length_180_cov_1.096552_g81991_i0forward_frame_1 - 1.1 8.1 4.3 1.2 8.0 4.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin ArsC PF03960.15 NODE_89925_length_180_cov_1.096552_g81984_i0forward_frame_1 - 0.054 13.5 0.1 0.073 13.1 0.1 1.2 1 0 0 1 1 1 0 ArsC family DUF2187 PF09953.9 NODE_89923_length_180_cov_1.096552_g81982_i0reverse_frame_1 - 0.063 13.3 0.1 0.074 13.0 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2187) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks454.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks454.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks454.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks454.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:39:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PDR_CDR PF06422.12 NODE_89908_length_180_cov_1.103448_g81967_i0reverse_frame_1 - 0.26 11.2 4.9 0.35 10.8 4.8 1.3 1 1 0 1 1 1 0 CDR ABC transporter CHIPS PF11434.8 NODE_89898_length_180_cov_1.103448_g81957_i0reverse_frame_1 - 0.049 13.5 0.2 0.052 13.4 0.2 1.1 1 0 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS Baculo_LEF-3 PF05847.11 NODE_89897_length_180_cov_1.103448_g81956_i0forward_frame_1 - 0.047 12.9 0.4 0.052 12.7 0.4 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus late expression factor 3 (LEF-3) Vps36-NZF-N PF16988.5 NODE_89896_length_180_cov_1.103448_g81955_i0forward_frame_1 - 0.00044 19.6 0.2 0.00044 19.6 0.2 1.9 1 1 1 2 2 2 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-Sec23_Sec24 PF04810.15 NODE_89896_length_180_cov_1.103448_g81955_i0forward_frame_1 - 0.72 10.0 6.6 2.9 8.0 6.6 1.8 1 1 0 1 1 1 0 Sec23/Sec24 zinc finger Bunya_NS-S PF01104.17 NODE_89892_length_180_cov_1.103448_g81951_i0reverse_frame_1 - 0.052 13.4 0.0 0.058 13.2 0.0 1.1 1 0 0 1 1 1 0 Bunyavirus non-structural protein NS-s HrpB4 PF09502.10 NODE_89875_length_180_cov_1.103448_g81934_i0reverse_frame_1 - 0.089 12.6 0.6 0.097 12.5 0.6 1.0 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB4) Cmc1 PF08583.10 NODE_89866_length_180_cov_1.103448_g81925_i0forward_frame_1 - 0.03 14.3 0.5 0.045 13.8 0.5 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like LPD26 PF18842.1 NODE_89842_length_180_cov_1.103448_g81901_i0forward_frame_1 - 0.043 13.8 0.1 0.057 13.4 0.1 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 26 DUF5519 PF17648.1 NODE_89835_length_180_cov_1.103448_g81894_i0reverse_frame_1 - 0.039 13.8 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5519) GF_recep_IV PF14843.6 NODE_89834_length_180_cov_1.103448_g81893_i0reverse_frame_1 - 0.027 14.3 0.2 0.028 14.2 0.2 1.0 1 0 0 1 1 1 0 Growth factor receptor domain IV DUF645 PF04875.12 NODE_89833_length_180_cov_1.103448_g81892_i0reverse_frame_1 - 0.041 13.9 0.7 0.073 13.1 0.1 1.7 1 1 1 2 2 2 0 Protein of unknown function, DUF645 Orexin PF02072.15 NODE_89813_length_180_cov_1.144828_g81872_i0forward_frame_1 - 0.042 13.8 0.2 0.046 13.7 0.2 1.1 1 0 0 1 1 1 0 Prepro-orexin GH101_N PF17995.1 NODE_89795_length_180_cov_1.193103_g81854_i0reverse_frame_1 - 0.0087 15.7 0.0 0.0088 15.7 0.0 1.1 1 0 0 1 1 1 1 Endo-alpha-N-acetylgalactosaminidase N-terminal DUF2868 PF11067.8 NODE_89795_length_180_cov_1.193103_g81854_i0reverse_frame_1 - 0.13 11.7 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2868) Ephrin_rec_like PF07699.13 NODE_89791_length_180_cov_1.206897_g81850_i0forward_frame_1 - 0.0067 16.2 12.1 0.02 14.6 2.3 2.3 1 1 0 2 2 2 2 Putative ephrin-receptor like TNFR_c6 PF00020.18 NODE_89791_length_180_cov_1.206897_g81850_i0forward_frame_1 - 0.016 15.6 9.4 0.053 13.9 3.7 2.2 2 0 0 2 2 2 0 TNFR/NGFR cysteine-rich region NCD3G PF07562.14 NODE_89791_length_180_cov_1.206897_g81850_i0forward_frame_1 - 0.068 13.2 1.2 0.068 13.2 1.2 2.2 1 1 2 3 3 3 0 Nine Cysteines Domain of family 3 GPCR Opy2 PF09463.10 NODE_89791_length_180_cov_1.206897_g81850_i0forward_frame_1 - 2.8 8.3 11.8 2.1 8.7 8.7 2.3 1 1 1 2 2 2 0 Opy2 protein UPF0547 PF10571.9 NODE_89790_length_180_cov_1.206897_g81849_i0forward_frame_1 - 0.38 10.9 0.1 0.38 10.9 0.1 2.4 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 Ion_trans PF00520.31 NODE_89789_length_180_cov_1.206897_g81848_i0forward_frame_1 - 0.081 12.1 0.2 0.077 12.2 0.2 1.0 1 0 0 1 1 1 0 Ion transport protein Endonuclease_7 PF02945.15 NODE_89788_length_180_cov_1.206897_g81847_i0reverse_frame_1 - 0.038 13.9 0.0 0.04 13.8 0.0 1.1 1 0 0 1 1 1 0 Recombination endonuclease VII Peptidase_M91 PF14891.6 NODE_89787_length_180_cov_1.206897_g81846_i0reverse_frame_1 - 0.075 13.3 0.1 0.079 13.3 0.1 1.0 1 0 0 1 1 1 0 Effector protein DUF2556 PF10831.8 NODE_89787_length_180_cov_1.206897_g81846_i0forward_frame_1 - 0.45 10.5 4.1 0.57 10.2 3.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2556) DUF983 PF06170.12 NODE_89785_length_180_cov_1.213793_g81844_i0reverse_frame_1 - 0.023 15.1 0.2 0.03 14.7 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF983) Transpos_assoc PF13963.6 NODE_89785_length_180_cov_1.213793_g81844_i0forward_frame_1 - 0.07 13.4 3.2 0.087 13.1 3.2 1.2 1 0 0 1 1 1 0 Transposase-associated domain DUF957 PF06117.11 NODE_89782_length_180_cov_1.227586_g81841_i0reverse_frame_1 - 0.0082 15.7 0.2 0.01 15.4 0.2 1.1 1 0 0 1 1 1 1 Enterobacterial protein of unknown function (DUF957) NKWYS PF10364.9 NODE_89782_length_180_cov_1.227586_g81841_i0reverse_frame_1 - 0.058 13.5 0.1 0.06 13.5 0.1 1.1 1 0 0 1 1 1 0 Putative capsular polysaccharide synthesis protein ARID PF01388.21 NODE_89782_length_180_cov_1.227586_g81841_i0forward_frame_1 - 4.2e-05 24.1 0.0 4.5e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 ARID/BRIGHT DNA binding domain TPR_9 PF13371.6 NODE_89781_length_180_cov_1.234483_g81840_i0reverse_frame_1 - 0.084 13.0 0.1 0.16 12.1 0.1 1.4 1 1 0 1 1 1 0 Tetratricopeptide repeat DUF4536 PF15055.6 NODE_89774_length_180_cov_1.255172_g81833_i0reverse_frame_1 - 0.25 11.6 0.3 0.25 11.6 0.3 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4536) EI24 PF07264.11 NODE_89771_length_180_cov_1.262069_g81830_i0forward_frame_1 - 0.5 10.6 9.2 0.52 10.5 9.2 1.0 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) TMPIT PF07851.13 NODE_89771_length_180_cov_1.262069_g81830_i0forward_frame_1 - 0.75 9.0 4.7 0.81 8.9 4.7 1.0 1 0 0 1 1 1 0 TMPIT-like protein Ac81 PF05820.11 NODE_89771_length_180_cov_1.262069_g81830_i0forward_frame_1 - 5.4 6.5 9.2 5.7 6.5 9.2 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 PilI PF10623.9 NODE_89769_length_180_cov_1.262069_g81828_i0forward_frame_1 - 0.099 12.8 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Plasmid conjugative transfer protein PilI TMEM43 PF07787.12 NODE_89767_length_180_cov_1.268966_g81826_i0reverse_frame_1 - 1.6 8.0 4.1 1.6 8.0 4.1 1.0 1 0 0 1 1 1 0 Transmembrane protein 43 Kelch_4 PF13418.6 NODE_89762_length_180_cov_1.268966_g81821_i0forward_frame_1 - 0.041 13.9 0.3 0.057 13.4 0.3 1.2 1 0 0 1 1 1 0 Galactose oxidase, central domain DB PF01682.19 NODE_89759_length_180_cov_1.275862_g81818_i0forward_frame_1 - 0.019 15.3 1.3 0.021 15.1 1.3 1.1 1 0 0 1 1 1 0 DB module Per1 PF04080.13 NODE_89758_length_180_cov_1.275862_g81817_i0forward_frame_1 - 1.4 8.6 6.8 1.6 8.5 6.8 1.0 1 0 0 1 1 1 0 Per1-like family Kelch_4 PF13418.6 NODE_89757_length_180_cov_1.275862_g81816_i0reverse_frame_1 - 0.11 12.6 0.6 5.5 7.1 0.5 2.2 2 0 0 2 2 2 0 Galactose oxidase, central domain EF-hand_7 PF13499.6 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.00036 20.9 0.9 0.00043 20.7 0.9 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.00053 19.3 1.0 0.00057 19.2 0.3 1.5 2 0 0 2 2 2 1 EF hand EF-hand_10 PF14788.6 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.0015 18.4 1.2 0.0019 18.0 0.3 1.6 1 1 1 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.0076 16.1 0.7 0.014 15.3 0.6 1.6 1 1 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 NODE_89747_length_180_cov_1.303448_g81806_i0forward_frame_1 - 0.054 13.3 0.4 0.099 12.5 0.2 1.5 1 1 1 2 2 2 0 EF-hand domain pair LSR PF05624.14 NODE_89746_length_180_cov_1.310345_g81805_i0reverse_frame_1 - 0.037 14.0 6.7 0.037 14.0 6.7 1.6 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) JAKMIP_CC3 PF16034.5 NODE_89745_length_180_cov_1.317241_g81804_i0forward_frame_1 - 0.028 14.4 0.0 0.03 14.3 0.0 1.1 1 0 0 1 1 1 0 JAKMIP CC3 domain DUF1465 PF07323.12 NODE_89745_length_180_cov_1.317241_g81804_i0forward_frame_1 - 0.1 12.5 0.0 0.11 12.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) MerR-DNA-bind PF09278.11 NODE_89745_length_180_cov_1.317241_g81804_i0forward_frame_1 - 0.11 13.1 1.0 0.14 12.7 1.0 1.3 1 1 0 1 1 1 0 MerR, DNA binding Bunya_G2 PF03563.13 NODE_89742_length_180_cov_1.337931_g81801_i0forward_frame_1 - 0.18 11.0 0.3 0.18 11.1 0.3 1.0 1 0 0 1 1 1 0 Bunyavirus glycoprotein G2 PilI PF10623.9 NODE_89730_length_180_cov_1.365517_g81789_i0reverse_frame_1 - 0.032 14.4 0.0 0.039 14.1 0.0 1.1 1 0 0 1 1 1 0 Plasmid conjugative transfer protein PilI HTH_52 PF18576.1 NODE_89728_length_180_cov_1.365517_g81787_i0forward_frame_1 - 0.04 14.1 0.7 0.066 13.4 0.7 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain Vps36-NZF-N PF16988.5 NODE_89727_length_180_cov_1.365517_g81786_i0forward_frame_1 - 0.049 13.0 0.1 0.062 12.7 0.1 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Thioredoxin_2 PF13098.6 NODE_89726_length_180_cov_1.372414_g81785_i0forward_frame_1 - 0.019 15.4 0.3 0.022 15.2 0.3 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Glutaredoxin PF00462.24 NODE_89724_length_180_cov_1.372414_g81783_i0forward_frame_1 - 1.3e-07 31.7 0.0 1.7e-07 31.3 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF809 PF05663.11 NODE_89723_length_180_cov_1.372414_g81782_i0forward_frame_1 - 0.21 11.7 1.4 0.24 11.5 1.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) Phage_RpbA PF10789.9 NODE_89721_length_180_cov_1.379310_g81780_i0forward_frame_1 - 0.055 13.5 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Phage RNA polymerase binding, RpbA G0-G1_switch_2 PF15103.6 NODE_89716_length_180_cov_1.379310_g81775_i0forward_frame_1 - 0.3 11.5 1.9 0.35 11.3 1.9 1.1 1 0 0 1 1 1 0 G0/G1 switch protein 2 Ac81 PF05820.11 NODE_89716_length_180_cov_1.379310_g81775_i0forward_frame_1 - 0.32 10.6 8.8 0.32 10.5 8.8 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 UPF0302 PF08864.10 NODE_89711_length_180_cov_1.379310_g81770_i0forward_frame_1 - 0.037 14.1 0.0 0.042 13.9 0.0 1.0 1 0 0 1 1 1 0 UPF0302 domain DHODB_Fe-S_bind PF10418.9 NODE_89711_length_180_cov_1.379310_g81770_i0forward_frame_1 - 0.061 13.1 1.9 0.092 12.6 1.9 1.2 1 0 0 1 1 1 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B MMU163 PF17119.5 NODE_89706_length_180_cov_1.379310_g81765_i0reverse_frame_1 - 0.031 13.5 0.6 0.033 13.4 0.6 1.2 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis PT-VENN PF04829.13 NODE_89700_length_180_cov_1.386207_g81759_i0reverse_frame_1 - 9.8 6.3 7.6 13 5.9 7.1 1.7 1 1 0 1 1 1 0 Pre-toxin domain with VENN motif HTH_23 PF13384.6 NODE_89696_length_180_cov_1.420690_g81755_i0reverse_frame_1 - 0.013 15.3 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 Homeodomain-like domain eIF-5a PF01287.20 NODE_89693_length_180_cov_1.434483_g81752_i0reverse_frame_1 - 0.13 12.4 0.0 0.15 12.2 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold Pep1_7 PF17232.2 NODE_89686_length_180_cov_1.468966_g81745_i0reverse_frame_1 - 0.043 14.3 0.1 0.048 14.1 0.1 1.1 1 0 0 1 1 1 0 Elicitor peptide 1-7 TPR_11 PF13414.6 NODE_89684_length_180_cov_1.482759_g81743_i0reverse_frame_1 - 0.092 12.4 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 TPR repeat Herpes_UL55 PF04537.12 NODE_89675_length_180_cov_1.537931_g81734_i0forward_frame_1 - 0.065 13.2 1.6 0.092 12.8 1.6 1.1 1 0 0 1 1 1 0 Herpesvirus UL55 protein DUF4750 PF15938.5 NODE_89671_length_180_cov_1.565517_g81730_i0reverse_frame_1 - 0.067 12.9 1.1 0.1 12.3 1.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4750) ASPRs PF17641.2 NODE_89671_length_180_cov_1.565517_g81730_i0forward_frame_1 - 0.092 13.0 0.0 0.095 13.0 0.0 1.0 1 0 0 1 1 1 0 Ancylostoma-associated secreted protein related DUF3644 PF12358.8 NODE_89669_length_180_cov_1.572414_g81728_i0forward_frame_1 - 0.071 13.6 0.1 0.093 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3644) Peptidase_M1_N PF17900.1 NODE_89662_length_180_cov_1.606897_g81721_i0forward_frame_1 - 5.9e-09 36.4 0.0 6e-09 36.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain TetR_C_2 PF08361.11 NODE_89656_length_180_cov_1.613793_g81715_i0forward_frame_1 - 0.052 13.6 0.1 0.052 13.6 0.1 1.0 1 0 0 1 1 1 0 MAATS-type transcriptional repressor, C-terminal region NuiA PF07924.11 NODE_89656_length_180_cov_1.613793_g81715_i0forward_frame_1 - 0.072 13.5 0.1 0.082 13.3 0.1 1.0 1 0 0 1 1 1 0 Nuclease A inhibitor-like protein Pyr_redox_2 PF07992.14 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 1.8e-10 40.6 0.1 1.8e-10 40.5 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 1.1e-07 32.3 0.6 1.8e-07 31.6 0.6 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 7.9e-05 22.1 0.0 7.9e-05 22.1 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 0.046 14.2 0.0 0.055 13.9 0.0 1.1 1 0 0 1 1 1 0 Putative NAD(P)-binding FMO-like PF00743.19 NODE_89655_length_180_cov_1.620690_g81714_i0reverse_frame_1 - 0.05 12.0 0.0 0.051 12.0 0.0 1.0 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Nairovirus_M PF07948.11 NODE_89643_length_180_cov_1.648276_g81702_i0reverse_frame_1 - 0.13 10.4 0.1 0.16 10.2 0.1 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like SR-25 PF10500.9 NODE_89643_length_180_cov_1.648276_g81702_i0forward_frame_1 - 6.3 6.3 12.4 6 6.4 12.4 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF1408 PF07193.11 NODE_89637_length_180_cov_1.648276_g81696_i0forward_frame_1 - 0.27 11.4 0.8 0.41 10.8 0.6 1.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1408) Med31 PF05669.12 NODE_89634_length_180_cov_1.648276_g81693_i0forward_frame_1 - 0.038 14.0 0.1 0.041 13.9 0.1 1.1 1 0 0 1 1 1 0 SOH1 Ank_2 PF12796.7 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 1.9e-07 31.6 0.0 2.5e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 4.4e-07 30.0 0.0 5.5e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 4.2e-06 26.9 0.1 6.1e-05 23.3 0.0 2.0 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 2.1e-05 24.5 0.0 0.0027 18.1 0.0 2.1 2 0 0 2 2 2 1 Ankyrin repeat Ank_4 PF13637.6 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 0.00082 19.9 0.0 0.0021 18.6 0.0 1.6 1 1 0 1 1 1 1 Ankyrin repeats (many copies) VWA_3_C PF18571.1 NODE_89631_length_180_cov_1.655172_g81690_i0forward_frame_1 - 0.072 13.0 0.5 0.18 11.7 0.1 1.8 2 0 0 2 2 2 0 von Willebrand factor type A C-terminal domain YppF PF14178.6 NODE_89626_length_180_cov_1.655172_g81685_i0reverse_frame_1 - 0.13 12.2 0.3 0.19 11.7 0.3 1.2 1 0 0 1 1 1 0 YppF-like protein Hep_core_N PF08290.11 NODE_89620_length_180_cov_1.655172_g81679_i0forward_frame_1 - 0.17 11.9 9.1 0.14 12.1 5.0 2.6 2 1 1 3 3 3 0 Hepatitis core protein, putative zinc finger ZZ PF00569.17 NODE_89618_length_180_cov_1.655172_g81677_i0reverse_frame_1 - 0.014 15.2 0.7 0.019 14.8 0.7 1.1 1 0 0 1 1 1 0 Zinc finger, ZZ type V_ATPase_I PF01496.19 NODE_89613_length_180_cov_1.668966_g81672_i0reverse_frame_1 - 2.9e-07 28.9 0.2 3e-07 28.8 0.2 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Ribosomal_S18 PF01084.20 NODE_89609_length_180_cov_1.682759_g81668_i0reverse_frame_1 - 1.3e-13 50.9 0.1 2e-13 50.3 0.1 1.3 1 1 0 1 1 1 1 Ribosomal protein S18 SelK_SelG PF10961.8 NODE_89594_length_180_cov_1.751724_g81653_i0forward_frame_1 - 0.1 13.2 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Selenoprotein SelK_SelG Mannitol_dh PF01232.23 NODE_89592_length_180_cov_1.765517_g81651_i0reverse_frame_1 - 1.9e-10 41.1 0.0 2e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain TMF_DNA_bd PF12329.8 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.00088 19.2 3.6 0.13 12.3 0.0 2.0 1 1 1 2 2 2 2 TATA element modulatory factor 1 DNA binding HAP1_N PF04849.13 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.0024 17.1 2.1 0.0027 17.0 2.1 1.1 1 0 0 1 1 1 1 HAP1 N-terminal conserved region TolA_bind_tri PF16331.5 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.014 15.5 1.0 0.016 15.2 1.0 1.1 1 0 0 1 1 1 0 TolA binding protein trimerisation SlyX PF04102.12 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.018 15.6 0.5 0.022 15.4 0.5 1.1 1 0 0 1 1 1 0 SlyX FlaC_arch PF05377.11 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.028 14.8 5.2 0.53 10.7 5.2 2.0 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) Atg14 PF10186.9 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.072 12.2 2.7 0.079 12.0 2.7 1.0 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1664 PF07889.12 NODE_89586_length_180_cov_1.834483_g81645_i0reverse_frame_1 - 0.14 12.2 2.1 0.15 12.1 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Spem1 PF15670.5 NODE_89584_length_180_cov_1.841379_g81643_i0forward_frame_1 - 0.16 11.5 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 Spermatid maturation protein 1 LepA_C PF06421.12 NODE_89582_length_180_cov_1.862069_g81641_i0forward_frame_1 - 1.5e-10 41.1 0.3 1.9e-10 40.9 0.3 1.1 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus Metallothio_5 PF02067.15 NODE_89570_length_180_cov_1.917241_g81629_i0reverse_frame_1 - 0.23 11.6 13.6 0.28 11.3 13.6 1.2 1 0 0 1 1 1 0 Metallothionein family 5 Tom37 PF10568.9 NODE_89569_length_180_cov_1.917241_g81628_i0reverse_frame_1 - 0.032 14.5 0.2 0.036 14.4 0.2 1.0 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein LETM1 PF07766.13 NODE_89561_length_180_cov_1.951724_g81620_i0forward_frame_1 - 0.047 13.0 0.1 0.048 13.0 0.1 1.1 1 0 0 1 1 1 0 LETM1-like protein Orthoreo_P17 PF07272.11 NODE_89561_length_180_cov_1.951724_g81620_i0forward_frame_1 - 0.12 12.3 0.0 0.14 12.2 0.0 1.3 1 1 0 1 1 1 0 Orthoreovirus P17 protein Rtt106_N PF18215.1 NODE_89560_length_180_cov_1.958621_g81619_i0forward_frame_1 - 0.019 14.7 0.0 0.025 14.3 0.0 1.2 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain RRM_1 PF00076.22 NODE_89557_length_180_cov_1.993103_g81616_i0forward_frame_1 - 0.00075 19.3 0.0 0.00086 19.1 0.0 1.3 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pkinase PF00069.25 NODE_89553_length_180_cov_2.013793_g81612_i0reverse_frame_1 - 3.3e-14 52.9 0.2 3.6e-14 52.8 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_89553_length_180_cov_2.013793_g81612_i0reverse_frame_1 - 6.7e-08 32.1 0.0 7.2e-08 32.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 NODE_89553_length_180_cov_2.013793_g81612_i0reverse_frame_1 - 0.052 12.3 0.1 0.052 12.3 0.1 1.0 1 0 0 1 1 1 0 Fungal protein kinase SBP56 PF05694.11 NODE_89551_length_180_cov_2.020690_g81610_i0forward_frame_1 - 0.11 11.3 0.0 0.12 11.2 0.0 1.0 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) preSET_CXC PF18264.1 NODE_89531_length_180_cov_2.124138_g81590_i0forward_frame_1 - 0.15 12.6 5.8 4.9 7.7 5.8 2.1 1 1 0 1 1 1 0 CXC domain GTPase_binding PF09027.10 NODE_89526_length_180_cov_2.151724_g81585_i0reverse_frame_1 - 0.1 12.6 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 GTPase binding ProSAAS PF07259.12 NODE_89520_length_180_cov_2.193103_g81579_i0forward_frame_1 - 0.017 15.1 0.4 0.017 15.1 0.4 1.1 1 0 0 1 1 1 0 ProSAAS precursor DUF2517 PF10725.9 NODE_89518_length_180_cov_2.200000_g81577_i0forward_frame_1 - 0.081 12.7 0.0 0.093 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2517) Antimicrobial_1 PF08018.11 NODE_89511_length_180_cov_2.220690_g81570_i0reverse_frame_1 - 0.0061 16.7 0.1 0.01 16.0 0.1 1.4 1 0 0 1 1 1 1 Frog antimicrobial peptide DUF1422 PF07226.11 NODE_89511_length_180_cov_2.220690_g81570_i0reverse_frame_1 - 0.087 12.8 1.3 0.16 12.0 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1422) TAtT PF16811.5 NODE_89509_length_180_cov_2.248276_g81568_i0reverse_frame_1 - 0.0027 17.1 0.2 0.0027 17.1 0.2 1.2 1 0 0 1 1 1 1 TRAP transporter T-component Suf PF05843.14 NODE_89509_length_180_cov_2.248276_g81568_i0reverse_frame_1 - 0.056 13.4 0.1 0.06 13.3 0.1 1.0 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) HAT PF02184.16 NODE_89509_length_180_cov_2.248276_g81568_i0reverse_frame_1 - 0.18 11.8 9.6 0.85 9.6 0.5 3.5 4 0 0 4 4 4 0 HAT (Half-A-TPR) repeat Pox_A32 PF04665.12 NODE_89502_length_180_cov_2.324138_g81561_i0reverse_frame_1 - 0.077 12.4 0.2 0.077 12.4 0.2 1.0 1 0 0 1 1 1 0 Poxvirus A32 protein YCF90 PF17088.5 NODE_89501_length_180_cov_2.344828_g81560_i0reverse_frame_1 - 0.019 14.3 0.1 0.02 14.3 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family PapD-like PF14874.6 NODE_89498_length_180_cov_2.379310_g81557_i0reverse_frame_1 - 0.1 12.8 0.0 0.1 12.8 0.0 1.1 1 0 0 1 1 1 0 Flagellar-associated PapD-like zf-rbx1 PF12678.7 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 3.8e-09 36.7 5.7 4.5e-09 36.5 5.7 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 1.6e-08 34.7 5.7 2.1e-08 34.4 5.7 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 5.5e-08 32.5 4.5 7.4e-08 32.1 4.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 7.1e-06 25.8 5.1 1.1e-05 25.2 5.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.00011 22.2 1.9 0.00014 21.9 1.9 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.00014 21.7 3.2 0.00019 21.2 3.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.00021 20.8 3.0 0.0003 20.3 3.0 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.0011 18.8 2.7 0.0015 18.4 2.7 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.0053 16.8 3.4 0.0086 16.1 3.4 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.006 16.3 2.0 0.006 16.3 2.0 1.6 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.0099 15.8 4.3 0.013 15.5 4.3 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING-like PF08746.11 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.062 13.6 5.9 0.087 13.1 5.9 1.2 1 0 0 1 1 1 0 RING-like domain zf-Nse PF11789.8 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.099 12.5 3.7 0.14 12.0 3.7 1.2 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit FANCL_C PF11793.8 NODE_89493_length_180_cov_2.448276_g81552_i0forward_frame_1 - 0.37 11.0 7.0 7.7 6.8 7.0 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain DUF3050 PF11251.8 NODE_89492_length_180_cov_2.448276_g81551_i0reverse_frame_1 - 0.0036 17.0 0.1 0.0036 17.0 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3050) DUF3377 PF11857.8 NODE_89491_length_180_cov_2.448276_g81550_i0forward_frame_1 - 0.0029 17.5 1.2 0.0035 17.2 1.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3377) SHP PF03579.13 NODE_89491_length_180_cov_2.448276_g81550_i0forward_frame_1 - 0.086 12.8 0.9 0.095 12.7 0.9 1.1 1 0 0 1 1 1 0 Small hydrophobic protein ExoD PF06055.12 NODE_89485_length_180_cov_2.531034_g81544_i0reverse_frame_1 - 0.078 12.4 0.1 0.083 12.3 0.1 1.0 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD DUF3797 PF12677.7 NODE_89485_length_180_cov_2.531034_g81544_i0forward_frame_1 - 0.074 13.0 0.6 0.11 12.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) TMEMspv1-c74-12 PF11044.8 NODE_89484_length_180_cov_2.544828_g81543_i0forward_frame_1 - 4.5 7.3 10.6 3.5 7.7 4.3 2.1 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF5405 PF17399.2 NODE_89473_length_180_cov_2.731034_g81532_i0reverse_frame_1 - 0.025 14.8 1.6 0.1 12.8 1.6 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF5405) CSN5_C PF18323.1 NODE_89464_length_180_cov_2.958621_g81523_i0forward_frame_1 - 0.018 15.9 1.1 0.022 15.7 1.1 1.1 1 0 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain DUF4349 PF14257.6 NODE_89464_length_180_cov_2.958621_g81523_i0forward_frame_1 - 0.059 12.8 1.4 0.069 12.6 1.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Sulfolobus_pRN PF05584.11 NODE_89462_length_180_cov_3.041379_g81521_i0forward_frame_1 - 0.0028 17.7 0.3 0.0034 17.4 0.3 1.2 1 0 0 1 1 1 1 Sulfolobus plasmid regulatory protein HupH_C PF04809.13 NODE_89461_length_180_cov_3.048276_g81520_i0reverse_frame_1 - 0.069 12.9 0.0 0.15 11.7 0.0 1.6 1 1 0 1 1 1 0 HupH hydrogenase expression protein, C-terminal conserved region DUF5463 PF17551.2 NODE_89461_length_180_cov_3.048276_g81520_i0forward_frame_1 - 1.2 9.1 6.3 0.24 11.4 1.7 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5463) PTS_IIA PF02255.16 NODE_89459_length_180_cov_3.262069_g81518_i0forward_frame_1 - 0.18 11.9 0.1 0.22 11.6 0.1 1.1 1 0 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIA subunit Spc24 PF08286.11 NODE_89456_length_180_cov_3.303448_g81515_i0forward_frame_1 - 0.1 12.9 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 SBP_bac_11 PF13531.6 NODE_89451_length_180_cov_3.558621_g81510_i0reverse_frame_1 - 9.9e-05 22.2 0.0 0.0001 22.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF4379 PF14311.6 NODE_89450_length_180_cov_3.579310_g81509_i0forward_frame_1 - 0.2 12.1 5.7 0.64 10.4 5.7 1.8 1 1 0 1 1 1 0 Probable Zinc-ribbon domain Csm4_C PF17953.1 NODE_89422_length_180_cov_26.765517_g81481_i0forward_frame_1 - 0.046 13.6 0.2 0.055 13.3 0.2 1.2 1 0 0 1 1 1 0 CRISPR Csm4 C-terminal domain PRY PF13765.6 NODE_89422_length_180_cov_26.765517_g81481_i0forward_frame_1 - 0.29 10.8 2.4 1.3 8.7 0.2 2.1 1 1 1 2 2 2 0 SPRY-associated domain DUF5363 PF17320.2 NODE_89413_length_180_cov_30.765517_g81472_i0forward_frame_1 - 0.0035 17.2 0.2 0.0048 16.7 0.2 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5363) EKLF_TAD1 PF16832.5 NODE_89403_length_180_cov_33.986207_g81462_i0reverse_frame_1 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 Erythroid krueppel-like transcription factor, transactivation 1 TMEM192 PF14802.6 NODE_89400_length_180_cov_34.889655_g81459_i0reverse_frame_1 - 0.0077 15.3 0.2 0.008 15.3 0.2 1.0 1 0 0 1 1 1 1 TMEM192 family FeoB_associated PF12669.7 NODE_89400_length_180_cov_34.889655_g81459_i0reverse_frame_1 - 0.12 12.8 2.8 0.16 12.4 2.8 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein zf-RVT PF13966.6 NODE_89396_length_180_cov_36.055172_g81455_i0reverse_frame_1 - 0.0041 17.8 0.1 0.005 17.5 0.1 1.1 1 0 0 1 1 1 1 zinc-binding in reverse transcriptase PH_17 PF18012.1 NODE_89395_length_180_cov_37.841379_g81454_i0reverse_frame_1 - 0.042 13.6 0.1 0.049 13.4 0.1 1.2 1 0 0 1 1 1 0 PH domain Arif-1 PF06770.11 NODE_89392_length_180_cov_38.806897_g81451_i0reverse_frame_1 - 0.097 12.3 4.3 0.082 12.6 4.3 1.1 1 0 0 1 1 1 0 Actin-rearrangement-inducing factor (Arif-1) AgrB PF04647.15 NODE_89390_length_180_cov_41.310345_g81449_i0reverse_frame_1 - 0.076 12.3 0.0 0.076 12.3 0.0 1.0 1 0 0 1 1 1 0 Accessory gene regulator B TTL PF03133.15 NODE_89388_length_180_cov_43.193103_g81447_i0reverse_frame_1 - 4.2e-18 65.5 0.7 4.6e-18 65.4 0.7 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Arm_vescicular PF18770.1 NODE_89383_length_180_cov_46.827586_g81442_i0reverse_frame_1 - 0.02 14.8 0.1 0.035 14.0 0.1 1.4 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor Doppel PF11466.8 NODE_89374_length_180_cov_58.379310_g81433_i0reverse_frame_1 - 0.1 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Prion-like protein Doppel IHABP4_N PF16174.5 NODE_89362_length_180_cov_67.358621_g81421_i0forward_frame_1 - 0.00033 21.3 0.1 0.0004 21.0 0.1 1.0 1 0 0 1 1 1 1 Intracellular hyaluronan-binding protein 4 N-terminal CENP-I PF07778.11 NODE_89348_length_180_cov_99.427586_g81407_i0reverse_frame_1 - 0.12 11.0 0.4 0.14 10.8 0.4 1.0 1 0 0 1 1 1 0 Mis6 SDH_sah PF01972.16 NODE_89346_length_180_cov_103.834483_g81405_i0forward_frame_1 - 0.18 10.8 0.2 0.19 10.7 0.2 1.0 1 0 0 1 1 1 0 Serine dehydrogenase proteinase Ldl_recept_a PF00057.18 NODE_89344_length_180_cov_108.696552_g81403_i0forward_frame_1 - 0.097 12.9 2.8 0.17 12.1 2.8 1.5 1 0 0 1 1 1 0 Low-density lipoprotein receptor domain class A SCIFF PF13165.6 NODE_89341_length_180_cov_136.717241_g81400_i0forward_frame_1 - 0.017 15.1 0.6 0.027 14.4 0.6 1.4 1 0 0 1 1 1 0 Six-cysteine peptide SCIFF Fer4_6 PF12837.7 NODE_89341_length_180_cov_136.717241_g81400_i0forward_frame_1 - 0.018 15.1 3.3 0.12 12.5 1.2 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 NODE_89341_length_180_cov_136.717241_g81400_i0forward_frame_1 - 0.028 14.2 4.4 0.16 11.8 2.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 NODE_89341_length_180_cov_136.717241_g81400_i0forward_frame_1 - 0.38 11.8 1.3 0.38 11.8 1.3 2.3 3 0 0 3 3 3 0 4Fe-4S binding domain YlaH PF14036.6 NODE_89338_length_180_cov_160.724138_g81397_i0forward_frame_1 - 0.09 13.1 4.2 0.19 12.0 4.2 1.5 1 1 0 1 1 1 0 YlaH-like protein UvrB_inter PF17757.1 NODE_89338_length_180_cov_160.724138_g81397_i0forward_frame_1 - 0.1 12.8 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 UvrB interaction domain DUF1980 PF09323.10 NODE_89334_length_180_cov_909.179310_g81393_i0forward_frame_1 - 0.69 9.8 4.1 0.69 9.8 4.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) TMEM154 PF15102.6 NODE_89331_length_180_cov_132729.262069_g81390_i0reverse_frame_1 - 0.14 12.1 5.2 0.16 11.9 5.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family G3P_acyltransf PF02660.15 NODE_89331_length_180_cov_132729.262069_g81390_i0reverse_frame_1 - 0.21 11.6 8.5 0.23 11.5 8.5 1.0 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase Orai-1 PF07856.12 NODE_89331_length_180_cov_132729.262069_g81390_i0reverse_frame_1 - 6.4 6.4 10.3 7.4 6.2 10.3 1.1 1 0 0 1 1 1 0 Mediator of CRAC channel activity CENP-B_dimeris PF09026.10 NODE_89331_length_180_cov_132729.262069_g81390_i0forward_frame_1 - 0.054 13.9 4.8 0.062 13.7 4.8 1.1 1 0 0 1 1 1 0 Centromere protein B dimerisation domain PLAC PF08686.11 NODE_89322_length_181_cov_0.821918_g81381_i0forward_frame_2 - 0.11 13.3 4.4 0.45 11.3 0.9 2.3 2 0 0 2 2 2 0 PLAC (protease and lacunin) domain Tad PF13400.6 NODE_89319_length_181_cov_0.821918_g81378_i0forward_frame_2 - 0.21 11.9 3.1 0.29 11.5 3.1 1.2 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like MHC_II_beta PF00969.19 NODE_89309_length_181_cov_0.910959_g81368_i0reverse_frame_2 - 0.01 15.9 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 0 Class II histocompatibility antigen, beta domain DUF4516 PF14990.6 NODE_89309_length_181_cov_0.910959_g81368_i0forward_frame_3 - 0.047 13.4 0.0 0.078 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) OAM_dimer PF16554.5 NODE_89307_length_181_cov_0.924658_g81366_i0forward_frame_3 - 0.21 12.0 0.0 0.26 11.8 0.0 1.1 1 0 0 1 1 1 0 Dimerisation domain of d-ornithine 4,5-aminomutase Ion_trans PF00520.31 NODE_89299_length_181_cov_0.979452_g81358_i0forward_frame_2 - 0.016 14.4 0.5 0.016 14.4 0.5 1.0 1 0 0 1 1 1 0 Ion transport protein Ribosomal_TL5_C PF14693.6 NODE_89298_length_181_cov_0.986301_g81357_i0forward_frame_3 - 0.054 13.9 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein TL5, C-terminal domain Mitochondr_Som1 PF11093.8 NODE_89298_length_181_cov_0.986301_g81357_i0forward_frame_2 - 4.3 7.4 7.6 3 7.9 5.6 1.8 1 1 1 2 2 2 0 Mitochondrial export protein Som1 Sec8_exocyst PF04048.14 NODE_89295_length_181_cov_0.993151_g81354_i0forward_frame_2 - 0.07 13.0 0.5 0.068 13.1 0.5 1.1 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain Glutaredoxin2_C PF04399.13 NODE_89295_length_181_cov_0.993151_g81354_i0forward_frame_2 - 0.1 12.4 0.1 0.11 12.4 0.1 1.0 1 0 0 1 1 1 0 Glutaredoxin 2, C terminal domain COX17 PF05051.13 NODE_89290_length_181_cov_1.020548_g81349_i0forward_frame_3 - 0.46 10.9 7.4 9.7 6.6 3.2 2.5 1 1 1 2 2 2 0 Cytochrome C oxidase copper chaperone (COX17) PulG PF11773.8 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_3 - 0.055 13.3 2.6 0.061 13.2 2.6 1.1 1 0 0 1 1 1 0 Type II secretory pathway pseudopilin EphA2_TM PF14575.6 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_3 - 0.1 13.5 0.1 0.11 13.4 0.1 1.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain YajC PF02699.15 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_3 - 1.1 9.2 4.7 1.3 8.9 4.7 1.1 1 0 0 1 1 1 0 Preprotein translocase subunit Glycoprotein PF03409.15 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_2 - 2.4 6.9 16.6 2.5 6.9 16.6 1.0 1 0 0 1 1 1 0 Transmembrane glycoprotein NUDE_C PF04880.13 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_2 - 2.6 8.5 7.2 2.8 8.4 7.2 1.0 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region TMEM154 PF15102.6 NODE_89286_length_181_cov_1.041096_g81345_i0reverse_frame_2 - 2.7 7.9 8.2 3.6 7.5 8.2 1.1 1 0 0 1 1 1 0 TMEM154 protein family Pex24p PF06398.11 NODE_89286_length_181_cov_1.041096_g81345_i0forward_frame_2 - 0.082 11.9 1.3 0.091 11.7 1.3 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin DUF4349 PF14257.6 NODE_89286_length_181_cov_1.041096_g81345_i0forward_frame_2 - 0.56 9.6 5.3 0.59 9.5 5.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Ac81 PF05820.11 NODE_89286_length_181_cov_1.041096_g81345_i0forward_frame_2 - 0.79 9.3 4.6 0.86 9.1 4.6 1.0 1 0 0 1 1 1 0 Baculoviridae AC81 S_4TM PF18159.1 NODE_89286_length_181_cov_1.041096_g81345_i0forward_frame_2 - 1.2 8.4 5.5 1.3 8.2 5.5 1.0 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF3894 PF13033.6 NODE_89285_length_181_cov_1.047945_g81344_i0forward_frame_3 - 0.15 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3894) DUF2145 PF09916.9 NODE_89283_length_181_cov_1.047945_g81342_i0forward_frame_2 - 0.087 12.5 0.0 0.094 12.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2145) Josephin PF02099.17 NODE_89279_length_181_cov_1.061644_g81338_i0reverse_frame_3 - 0.022 14.9 0.1 0.022 14.9 0.1 1.1 1 0 0 1 1 1 0 Josephin IlvGEDA_leader PF08046.11 NODE_89278_length_181_cov_1.061644_g81337_i0reverse_frame_3 - 0.022 14.2 0.4 0.029 13.8 0.4 1.2 1 0 0 1 1 1 0 IlvGEDA operon leader peptide HC2 PF07382.11 NODE_89278_length_181_cov_1.061644_g81337_i0forward_frame_2 - 0.14 12.3 0.6 0.14 12.2 0.6 1.0 1 0 0 1 1 1 0 Histone H1-like nucleoprotein HC2 PcF PF09461.10 NODE_89276_length_181_cov_1.068493_g81335_i0forward_frame_2 - 0.068 13.5 0.0 0.094 13.1 0.0 1.2 1 0 0 1 1 1 0 Phytotoxin PcF protein TCL1_MTCP1 PF01840.17 NODE_89269_length_181_cov_1.075342_g81328_i0reverse_frame_2 - 0.16 11.6 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 TCL1/MTCP1 family Phage_Arf PF17585.2 NODE_89269_length_181_cov_1.075342_g81328_i0forward_frame_2 - 0.11 12.4 0.0 0.19 11.7 0.0 1.4 2 0 0 2 2 2 0 Accessory recombination function protein DUF2048 PF09752.9 NODE_89268_length_181_cov_1.075342_g81327_i0forward_frame_2 - 0.11 11.6 0.2 0.13 11.4 0.2 1.0 1 0 0 1 1 1 0 Abhydrolase domain containing 18 TMEM169 PF15052.6 NODE_89266_length_181_cov_1.082192_g81325_i0forward_frame_3 - 0.0079 16.3 0.0 0.0094 16.1 0.0 1.1 1 0 0 1 1 1 1 TMEM169 protein family Seipin PF06775.14 NODE_89265_length_181_cov_1.082192_g81324_i0reverse_frame_2 - 0.089 12.9 0.2 0.098 12.8 0.2 1.0 1 0 0 1 1 1 0 Putative adipose-regulatory protein (Seipin) Tmemb_9 PF05434.11 NODE_89264_length_181_cov_1.082192_g81323_i0forward_frame_3 - 0.29 11.0 2.6 0.33 10.8 2.6 1.1 1 0 0 1 1 1 0 TMEM9 DUF3404 PF11884.8 NODE_89264_length_181_cov_1.082192_g81323_i0forward_frame_3 - 0.43 9.7 1.6 0.41 9.8 1.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) DUF1356 PF07092.12 NODE_89263_length_181_cov_1.082192_g81322_i0forward_frame_2 - 0.0019 17.5 0.3 0.0021 17.3 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1356) TgMIC1 PF11476.8 NODE_89262_length_181_cov_1.082192_g81321_i0forward_frame_3 - 0.099 12.4 0.0 0.099 12.4 0.0 1.1 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 DUF5484 PF17583.2 NODE_89260_length_181_cov_1.082192_g81319_i0reverse_frame_3 - 0.12 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5484) UspB PF10625.9 NODE_89258_length_181_cov_1.082192_g81317_i0forward_frame_3 - 0.12 12.4 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Universal stress protein B (UspB) CD225 PF04505.12 NODE_89253_length_181_cov_1.089041_g81312_i0forward_frame_3 - 0.061 13.5 0.4 0.061 13.5 0.4 1.6 1 1 1 2 2 2 0 Interferon-induced transmembrane protein GTP1_OBG PF01018.22 NODE_89249_length_181_cov_1.089041_g81308_i0reverse_frame_3 - 0.062 12.9 0.0 0.067 12.8 0.0 1.1 1 0 0 1 1 1 0 GTP1/OBG OKR_DC_1_N PF03709.15 NODE_89249_length_181_cov_1.089041_g81308_i0forward_frame_3 - 0.12 12.6 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain PROL5-SMR PF15621.6 NODE_89247_length_181_cov_1.089041_g81306_i0forward_frame_3 - 0.014 15.9 0.9 0.015 15.8 0.9 1.1 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family DUF5320 PF17253.2 NODE_89245_length_181_cov_1.089041_g81304_i0forward_frame_3 - 0.0075 17.3 0.2 0.0085 17.1 0.2 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5320) FoP_duplication PF13865.6 NODE_89245_length_181_cov_1.089041_g81304_i0forward_frame_3 - 0.05 14.2 3.2 0.055 14.0 3.2 1.1 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 ASPRs PF17641.2 NODE_89242_length_181_cov_1.089041_g81301_i0reverse_frame_3 - 0.14 12.4 0.0 0.15 12.4 0.0 1.0 1 0 0 1 1 1 0 Ancylostoma-associated secreted protein related zf-TRM13_CCCH PF11722.8 NODE_89241_length_181_cov_1.089041_g81300_i0forward_frame_3 - 0.021 14.6 0.3 0.049 13.4 0.3 1.6 1 0 0 1 1 1 0 CCCH zinc finger in TRM13 protein Neisseria_TspB PF05616.13 NODE_89238_length_181_cov_1.089041_g81297_i0reverse_frame_3 - 0.5 8.8 6.6 0.48 8.8 6.6 1.0 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Herpes_UL52 PF03121.15 NODE_89236_length_181_cov_1.089041_g81295_i0forward_frame_2 - 0.089 12.7 0.4 0.11 12.5 0.4 1.1 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase NdhM PF10664.9 NODE_89232_length_181_cov_1.089041_g81291_i0reverse_frame_3 - 0.14 12.4 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Cyanobacterial and plastid NDH-1 subunit M SPC12 PF06645.13 NODE_89230_length_181_cov_1.089041_g81289_i0reverse_frame_2 - 0.62 10.2 4.7 1 9.5 0.7 2.0 1 1 1 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) WD40 PF00400.32 NODE_89224_length_181_cov_1.095890_g81283_i0forward_frame_2 - 4.3e-08 33.7 0.5 0.00036 21.3 0.0 2.1 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_89224_length_181_cov_1.095890_g81283_i0forward_frame_2 - 0.00026 21.2 0.1 0.00029 21.1 0.1 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 NODE_89224_length_181_cov_1.095890_g81283_i0forward_frame_2 - 0.00044 19.0 0.2 0.00044 19.0 0.2 1.0 1 0 0 1 1 1 1 Nucleoporin Nup120/160 DUF999 PF06198.11 NODE_89223_length_181_cov_1.095890_g81282_i0forward_frame_3 - 0.055 13.5 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF999) Synthase_beta PF11421.8 NODE_89221_length_181_cov_1.095890_g81280_i0forward_frame_3 - 0.1 13.3 1.8 0.98 10.2 0.7 2.0 1 1 1 2 2 2 0 ATP synthase F1 beta subunit Peptidase_C33 PF05412.12 NODE_89219_length_181_cov_1.095890_g81278_i0reverse_frame_3 - 0.006 16.6 0.0 0.0064 16.5 0.0 1.1 1 0 0 1 1 1 1 Equine arterivirus Nsp2-type cysteine proteinase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks455.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks455.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks455.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks455.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:33:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Adeno_PIX PF03955.14 NODE_89210_length_181_cov_1.095890_g81269_i0reverse_frame_2 - 0.011 15.9 1.5 0.012 15.8 1.5 1.1 1 0 0 1 1 1 0 Adenovirus hexon-associated protein (IX) DUF4834 PF16118.5 NODE_89210_length_181_cov_1.095890_g81269_i0forward_frame_3 - 3.8 8.5 5.5 4.1 8.4 5.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Spt20 PF12090.8 NODE_89210_length_181_cov_1.095890_g81269_i0forward_frame_3 - 4.7 6.8 11.5 5.1 6.6 11.5 1.0 1 0 0 1 1 1 0 Spt20 family AcrZ PF10766.9 NODE_89199_length_181_cov_1.095890_g81258_i0reverse_frame_2 - 0.2 11.3 0.0 0.3 10.7 0.0 1.4 1 0 0 1 1 1 0 Multidrug efflux pump-associated protein AcrZ RVT_1 PF00078.27 NODE_89196_length_181_cov_1.095890_g81255_i0forward_frame_3 - 0.059 12.9 0.0 0.082 12.4 0.0 1.2 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) MGC-24 PF05283.11 NODE_89195_length_181_cov_1.095890_g81254_i0reverse_frame_3 - 0.57 10.6 9.1 0.58 10.6 9.1 1.0 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF1962 PF09227.10 NODE_89189_length_181_cov_1.095890_g81248_i0reverse_frame_3 - 2.7 8.4 7.7 0.79 10.1 2.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1962) Peptidase_C32 PF05411.12 NODE_89185_length_181_cov_1.095890_g81244_i0reverse_frame_2 - 0.009 15.9 0.1 0.012 15.6 0.1 1.4 1 1 0 1 1 1 1 Equine arteritis virus putative proteinase PBP_like PF12727.7 NODE_89183_length_181_cov_1.095890_g81242_i0forward_frame_3 - 0.0021 17.2 0.0 0.0022 17.1 0.0 1.0 1 0 0 1 1 1 1 PBP superfamily domain PBP_like_2 PF12849.7 NODE_89183_length_181_cov_1.095890_g81242_i0forward_frame_3 - 0.034 13.8 0.0 0.038 13.7 0.0 1.0 1 0 0 1 1 1 0 PBP superfamily domain MFS_1 PF07690.16 NODE_89180_length_181_cov_1.095890_g81239_i0forward_frame_3 - 9.1e-07 28.1 0.1 1e-06 27.9 0.1 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Inhibitor_I36 PF03995.13 NODE_89174_length_181_cov_1.095890_g81233_i0reverse_frame_2 - 0.007 16.3 1.4 0.01 15.8 1.4 1.3 1 0 0 1 1 1 1 Peptidase inhibitor family I36 bacHORMA_2 PF18173.1 NODE_89172_length_181_cov_1.095890_g81231_i0reverse_frame_2 - 0.12 12.2 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 Bacterial HORMA domain 2 TPP_enzyme_N PF02776.18 NODE_89172_length_181_cov_1.095890_g81231_i0forward_frame_2 - 0.088 12.4 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PC_rep PF01851.22 NODE_89169_length_181_cov_1.095890_g81228_i0forward_frame_3 - 0.011 16.1 0.0 0.013 15.9 0.0 1.2 1 0 0 1 1 1 0 Proteasome/cyclosome repeat zf-UDP PF14569.6 NODE_89168_length_181_cov_1.095890_g81227_i0reverse_frame_2 - 0.028 14.5 1.6 0.031 14.4 1.6 1.2 1 0 0 1 1 1 0 Zinc-binding RING-finger zf_C2H2_13 PF18508.1 NODE_89165_length_181_cov_1.095890_g81224_i0reverse_frame_3 - 0.0057 16.2 0.6 0.0094 15.5 0.6 1.4 1 0 0 1 1 1 1 Zinc finger domain Rpr2 PF04032.16 NODE_89165_length_181_cov_1.095890_g81224_i0reverse_frame_3 - 0.02 15.2 1.3 0.02 15.2 1.3 1.1 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Ion_trans PF00520.31 NODE_89162_length_181_cov_1.095890_g81221_i0reverse_frame_2 - 0.02 14.2 0.1 0.02 14.2 0.1 1.1 1 0 0 1 1 1 0 Ion transport protein DUF1375 PF07119.12 NODE_89162_length_181_cov_1.095890_g81221_i0reverse_frame_2 - 0.13 12.7 0.0 0.24 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1375) TssN PF17555.2 NODE_89159_length_181_cov_1.095890_g81218_i0forward_frame_2 - 0.031 13.7 0.3 0.031 13.7 0.3 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF5607 PF18355.1 NODE_89159_length_181_cov_1.095890_g81218_i0forward_frame_2 - 0.04 14.3 0.0 0.055 13.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5607) Tubulin_C PF03953.17 NODE_89157_length_181_cov_1.095890_g81216_i0reverse_frame_2 - 0.086 13.0 0.1 0.1 12.8 0.1 1.2 1 0 0 1 1 1 0 Tubulin C-terminal domain Hydrophobin_2 PF06766.11 NODE_89156_length_181_cov_1.095890_g81215_i0reverse_frame_2 - 0.057 13.4 0.8 0.057 13.4 0.8 1.5 1 1 1 2 2 2 0 Fungal hydrophobin LIFR_N PF18207.1 NODE_89155_length_181_cov_1.095890_g81214_i0forward_frame_2 - 0.045 14.1 0.5 0.054 13.9 0.5 1.2 1 0 0 1 1 1 0 Leukemia inhibitory factor receptor N-terminal domain zf-BED PF02892.15 NODE_89153_length_181_cov_1.095890_g81212_i0forward_frame_3 - 2.8 8.1 8.0 5.7 7.0 8.0 1.6 1 1 0 1 1 1 0 BED zinc finger Herp-Cyclin PF09241.10 NODE_89152_length_181_cov_1.095890_g81211_i0forward_frame_2 - 0.073 13.7 0.7 0.07 13.8 0.7 1.1 1 0 0 1 1 1 0 Herpesviridae viral cyclin CysG_dimeriser PF10414.9 NODE_89151_length_181_cov_1.095890_g81210_i0forward_frame_2 - 0.12 12.1 0.2 0.18 11.5 0.2 1.2 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region DUF3079 PF11278.8 NODE_89147_length_181_cov_1.095890_g81206_i0forward_frame_2 - 0.23 11.3 2.2 2.3 8.1 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3079) PseudoU_synth_2 PF00849.22 NODE_89146_length_181_cov_1.095890_g81205_i0reverse_frame_2 - 0.0039 17.3 0.0 0.0046 17.1 0.0 1.0 1 0 0 1 1 1 1 RNA pseudouridylate synthase Cuticle_2 PF08184.11 NODE_89146_length_181_cov_1.095890_g81205_i0reverse_frame_2 - 0.026 14.5 0.1 0.033 14.2 0.1 1.2 1 0 0 1 1 1 0 Cuticle protein 7 isoform family IN_DBD_C PF00552.21 NODE_89143_length_181_cov_1.095890_g81202_i0forward_frame_2 - 0.02 14.2 0.1 0.028 13.7 0.1 1.3 1 0 0 1 1 1 0 Integrase DNA binding domain Dynamin_M PF01031.20 NODE_89137_length_181_cov_1.109589_g81196_i0reverse_frame_3 - 6.2e-07 28.9 0.1 6.8e-07 28.8 0.1 1.0 1 0 0 1 1 1 1 Dynamin central region CrgA PF06781.12 NODE_89133_length_181_cov_1.136986_g81192_i0reverse_frame_2 - 0.11 12.6 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Cell division protein CrgA Med31 PF05669.12 NODE_89128_length_181_cov_1.150685_g81187_i0reverse_frame_2 - 0.085 12.9 0.1 0.12 12.4 0.1 1.2 1 0 0 1 1 1 0 SOH1 Nucleocap_ssRNA PF11128.8 NODE_89126_length_181_cov_1.157534_g81185_i0forward_frame_3 - 0.034 13.9 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 Plant viral coat protein nucleocapsid MSV199 PF10553.9 NODE_89125_length_181_cov_1.164384_g81184_i0reverse_frame_3 - 0.01 16.0 0.6 0.012 15.8 0.6 1.1 1 0 0 1 1 1 0 MSV199 domain DUF4321 PF14209.6 NODE_89125_length_181_cov_1.164384_g81184_i0forward_frame_2 - 0.01 15.7 1.3 0.015 15.1 1.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4321) Nodulin PF02451.15 NODE_89121_length_181_cov_1.178082_g81180_i0reverse_frame_2 - 0.082 12.4 0.0 0.088 12.3 0.0 1.1 1 0 0 1 1 1 0 Nodulin SNURF PF07192.11 NODE_89121_length_181_cov_1.178082_g81180_i0forward_frame_3 - 0.099 12.5 0.1 0.11 12.4 0.1 1.1 1 0 0 1 1 1 0 SNURF/RPN4 protein DUF5585 PF17823.1 NODE_89120_length_181_cov_1.184932_g81179_i0reverse_frame_3 - 0.03 13.3 0.2 0.031 13.3 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5585) VP_N-CPKC PF11475.8 NODE_89119_length_181_cov_1.184932_g81178_i0forward_frame_2 - 0.026 14.4 0.2 0.048 13.6 0.2 1.4 1 0 0 1 1 1 0 Virion protein N terminal domain RCR PF12273.8 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.025 15.2 0.7 0.028 15.1 0.7 1.2 1 0 0 1 1 1 0 Chitin synthesis regulation, resistance to Congo red SR-25 PF10500.9 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.042 13.5 3.7 0.042 13.4 3.7 1.0 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4834 PF16118.5 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.088 13.8 0.0 0.095 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) EphA2_TM PF14575.6 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.11 13.4 0.1 0.12 13.3 0.1 1.2 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF5129 PF17173.4 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 0.16 11.0 0.7 0.18 10.9 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) FeoB_associated PF12669.7 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 2.1 8.8 6.0 38 4.8 6.0 2.1 1 1 0 1 1 1 0 FeoB-associated Cys-rich membrane protein DUF1180 PF06679.12 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_3 - 5.4 7.4 8.2 4.2 7.8 7.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1180) CDK2AP PF09806.9 NODE_89115_length_181_cov_1.198630_g81174_i0forward_frame_2 - 0.09 12.8 1.0 0.091 12.8 1.0 1.0 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein DUF1409 PF07197.12 NODE_89112_length_181_cov_1.219178_g81171_i0forward_frame_2 - 0.016 15.1 2.5 0.46 10.4 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1409) Sensor PF13796.6 NODE_89110_length_181_cov_1.226027_g81169_i0reverse_frame_2 - 0.025 14.7 2.0 0.028 14.5 2.0 1.0 1 0 0 1 1 1 0 Putative sensor Chromosome_seg PF13889.6 NODE_89107_length_181_cov_1.226027_g81166_i0reverse_frame_2 - 0.02 15.0 0.6 0.02 15.0 0.6 1.6 2 0 0 2 2 2 0 Chromosome segregation during meiosis DUF963 PF06131.11 NODE_89102_length_181_cov_1.239726_g81161_i0reverse_frame_2 - 0.083 12.3 2.3 0.12 11.8 2.3 1.2 1 0 0 1 1 1 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) SAICAR_synt PF01259.18 NODE_89101_length_181_cov_1.246575_g81160_i0forward_frame_3 - 2.5e-11 43.7 0.0 2.6e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase DUF3390 PF11870.8 NODE_89100_length_181_cov_1.246575_g81159_i0reverse_frame_3 - 0.015 15.6 0.0 0.016 15.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3390) DarA_N PF18788.1 NODE_89100_length_181_cov_1.246575_g81159_i0reverse_frame_3 - 0.027 14.5 0.7 0.03 14.4 0.7 1.0 1 0 0 1 1 1 0 Defence against restriction A N-terminal DUF1360 PF07098.11 NODE_89100_length_181_cov_1.246575_g81159_i0reverse_frame_3 - 0.033 14.1 0.2 0.04 13.8 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) DUF4710 PF15828.5 NODE_89100_length_181_cov_1.246575_g81159_i0reverse_frame_2 - 0.025 14.7 0.1 0.028 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) UPF0640 PF15114.6 NODE_89100_length_181_cov_1.246575_g81159_i0forward_frame_2 - 0.018 14.8 1.8 0.027 14.3 1.8 1.3 1 0 0 1 1 1 0 Uncharacterised protein family UPF0640 BING4CT PF08149.11 NODE_89097_length_181_cov_1.246575_g81156_i0forward_frame_2 - 8.8e-25 86.3 0.0 9.4e-25 86.2 0.0 1.0 1 0 0 1 1 1 1 BING4CT (NUC141) domain Aminotran_1_2 PF00155.21 NODE_89095_length_181_cov_1.267123_g81154_i0reverse_frame_3 - 0.0096 15.1 0.0 0.011 15.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Atrophin-1 PF03154.15 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_3 - 4.8 5.3 8.7 4.5 5.4 8.7 1.0 1 0 0 1 1 1 0 Atrophin-1 family Atrophin-1 PF03154.15 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_2 - 0.14 10.5 2.5 0.12 10.7 2.5 1.0 1 0 0 1 1 1 0 Atrophin-1 family DUF3915 PF13054.6 NODE_89088_length_181_cov_1.280822_g81147_i0forward_frame_2 - 0.24 11.4 1.5 0.24 11.4 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) IPPT PF01715.17 NODE_89086_length_181_cov_1.280822_g81145_i0forward_frame_2 - 2e-17 63.8 0.0 2e-17 63.8 0.0 1.0 1 0 0 1 1 1 1 IPP transferase DUF2618 PF10940.8 NODE_89079_length_181_cov_1.294521_g81138_i0reverse_frame_2 - 0.073 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2618) DUF1033 PF06279.11 NODE_89073_length_181_cov_1.328767_g81132_i0forward_frame_3 - 0.011 15.8 0.1 0.011 15.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1033) HOK_GEF PF01848.16 NODE_89073_length_181_cov_1.328767_g81132_i0forward_frame_2 - 0.082 12.3 0.0 1 8.8 0.0 2.0 2 0 0 2 2 2 0 Hok/gef family Prok-E2_B PF14461.6 NODE_89070_length_181_cov_1.342466_g81129_i0forward_frame_2 - 0.029 14.1 0.1 0.032 13.9 0.1 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family B bacHORMA_1 PF18138.1 NODE_89070_length_181_cov_1.342466_g81129_i0forward_frame_2 - 0.11 12.3 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial HORMA domain family 1 cNMPbd_u2 PF16643.5 NODE_89069_length_181_cov_1.349315_g81128_i0forward_frame_2 - 0.049 14.1 0.0 0.049 14.1 0.0 1.1 1 0 0 1 1 1 0 Unstructured region on cNMP-binding protein TP2 PF01254.18 NODE_89068_length_181_cov_1.349315_g81127_i0reverse_frame_2 - 2.6 8.7 20.9 3 8.4 20.9 1.1 1 0 0 1 1 1 0 Nuclear transition protein 2 Transformer PF06495.11 NODE_89068_length_181_cov_1.349315_g81127_i0reverse_frame_2 - 3.2 7.8 18.1 3.5 7.7 18.1 1.1 1 0 0 1 1 1 0 Fruit fly transformer protein DUF2207 PF09972.9 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_2 - 1.1 7.9 4.2 1.1 7.9 4.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Pex24p PF06398.11 NODE_89068_length_181_cov_1.349315_g81127_i0forward_frame_2 - 9.5 5.1 7.4 9.7 5.1 7.4 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin UPF0506 PF11703.8 NODE_89067_length_181_cov_1.349315_g81126_i0reverse_frame_3 - 0.044 14.1 6.9 0.093 13.1 6.9 1.5 1 1 0 1 1 1 0 UPF0506 DUF5095 PF17016.5 NODE_89065_length_181_cov_1.349315_g81124_i0forward_frame_3 - 0.016 14.9 0.7 0.016 14.9 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5095) Sld5 PF05916.11 NODE_89063_length_181_cov_1.349315_g81122_i0forward_frame_2 - 0.013 15.9 0.0 0.015 15.7 0.0 1.0 1 0 0 1 1 1 0 GINS complex protein KOW PF00467.29 NODE_89059_length_181_cov_1.363014_g81118_i0reverse_frame_3 - 0.00041 20.2 0.1 0.00053 19.8 0.1 1.2 1 0 0 1 1 1 1 KOW motif PI3K_C2 PF00792.24 NODE_89058_length_181_cov_1.363014_g81117_i0forward_frame_3 - 0.11 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase C2 Pet191_N PF10203.9 NODE_89057_length_181_cov_1.363014_g81116_i0forward_frame_3 - 0.084 13.2 0.9 0.093 13.0 0.9 1.1 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein PET191 MTHFR PF02219.17 NODE_89057_length_181_cov_1.363014_g81116_i0forward_frame_2 - 0.0054 16.1 0.0 0.006 15.9 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase DUF4306 PF14154.6 NODE_89055_length_181_cov_1.363014_g81114_i0forward_frame_3 - 0.03 14.5 0.2 0.034 14.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4306) DUF2680 PF10925.8 NODE_89052_length_181_cov_1.369863_g81111_i0forward_frame_3 - 0.028 14.4 1.9 0.81 9.7 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) Cullin_binding PF03556.15 NODE_89052_length_181_cov_1.369863_g81111_i0forward_frame_3 - 0.051 14.0 0.1 0.056 13.9 0.1 1.2 1 0 0 1 1 1 0 Cullin binding Ribosomal_L29 PF00831.23 NODE_89052_length_181_cov_1.369863_g81111_i0forward_frame_3 - 0.098 12.6 0.1 1.4 8.9 0.0 2.0 2 0 0 2 2 2 0 Ribosomal L29 protein FTCD_C PF04961.12 NODE_89052_length_181_cov_1.369863_g81111_i0forward_frame_3 - 0.12 12.1 0.1 0.12 12.1 0.1 1.1 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase DUF169 PF02596.15 NODE_89046_length_181_cov_1.369863_g81105_i0reverse_frame_2 - 0.13 12.1 0.0 0.14 12.0 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised ArCR, COG2043 Sh_2 PF17512.2 NODE_89042_length_181_cov_1.369863_g81101_i0forward_frame_3 - 0.14 11.9 1.3 0.15 11.8 1.3 1.1 1 0 0 1 1 1 0 Metapneumovirus Small hydrophobic protein Pkinase PF00069.25 NODE_89040_length_181_cov_1.369863_g81099_i0reverse_frame_3 - 0.081 12.3 0.0 0.081 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Pkinase PF00069.25 NODE_89040_length_181_cov_1.369863_g81099_i0reverse_frame_2 - 1.1e-07 31.5 0.4 1.2e-07 31.4 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_89040_length_181_cov_1.369863_g81099_i0reverse_frame_2 - 0.0043 16.4 0.1 0.0043 16.4 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase DUF4894 PF16235.5 NODE_89040_length_181_cov_1.369863_g81099_i0reverse_frame_2 - 0.059 13.7 0.0 0.06 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4894) DUF1599 PF07659.11 NODE_89037_length_181_cov_1.390411_g81096_i0reverse_frame_3 - 0.12 12.8 0.0 0.16 12.5 0.0 1.1 1 0 0 1 1 1 0 Nucleotide modification associated domain 1 HapK PF11639.8 NODE_89037_length_181_cov_1.390411_g81096_i0reverse_frame_2 - 0.14 12.6 0.0 0.14 12.6 0.0 1.1 1 0 0 1 1 1 0 REDY-like protein HapK Fer4_23 PF18009.1 NODE_89036_length_181_cov_1.390411_g81095_i0reverse_frame_2 - 0.0045 17.4 0.0 0.0056 17.1 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S iron-sulfur cluster binding domain rpo132 PF12415.8 NODE_89033_length_181_cov_1.404110_g81092_i0reverse_frame_2 - 0.045 13.1 0.1 0.052 12.8 0.1 1.2 1 0 0 1 1 1 0 Poxvirus DNA dependent RNA polymerase TAF8_C PF10406.9 NODE_89033_length_181_cov_1.404110_g81092_i0forward_frame_3 - 0.03 14.9 0.1 0.04 14.5 0.1 1.3 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term DUF3452 PF11934.8 NODE_89031_length_181_cov_1.404110_g81090_i0reverse_frame_2 - 0.071 12.7 0.0 0.072 12.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) META PF03724.16 NODE_89031_length_181_cov_1.404110_g81090_i0forward_frame_2 - 0.17 11.8 1.3 0.21 11.5 1.3 1.1 1 0 0 1 1 1 0 META domain zf-ACC PF17848.1 NODE_89030_length_181_cov_1.404110_g81089_i0reverse_frame_3 - 0.0018 18.3 0.1 0.0018 18.3 0.1 1.5 2 0 0 2 2 2 1 Acetyl-coA carboxylase zinc finger domain Put_Phosphatase PF06888.12 NODE_89030_length_181_cov_1.404110_g81089_i0reverse_frame_3 - 0.083 12.3 0.4 0.095 12.1 0.4 1.0 1 0 0 1 1 1 0 Putative Phosphatase Toxin_38 PF14866.6 NODE_89024_length_181_cov_1.424658_g81083_i0forward_frame_2 - 0.0071 16.6 0.0 0.0098 16.2 0.0 1.1 1 0 0 1 1 1 1 Potassium channel toxin zf-C4 PF00105.18 NODE_89022_length_181_cov_1.452055_g81081_i0reverse_frame_2 - 0.00076 19.9 1.3 0.00084 19.7 1.3 1.1 1 0 0 1 1 1 1 Zinc finger, C4 type (two domains) Ion_trans PF00520.31 NODE_89018_length_181_cov_1.472603_g81077_i0forward_frame_2 - 3.5e-10 39.5 0.4 3.7e-10 39.4 0.4 1.0 1 0 0 1 1 1 1 Ion transport protein Cys_rich_FGFR PF00839.17 NODE_89002_length_181_cov_1.527397_g81061_i0forward_frame_3 - 0.065 13.4 0.0 0.086 13.0 0.0 1.1 1 0 0 1 1 1 0 Cysteine rich repeat DUF612 PF04747.12 NODE_88997_length_181_cov_1.547945_g81056_i0forward_frame_3 - 0.0058 15.8 1.3 0.0058 15.8 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF612 Peroxidase_ext PF11895.8 NODE_88996_length_181_cov_1.547945_g81055_i0reverse_frame_3 - 0.063 13.2 0.0 0.07 13.1 0.0 1.1 1 0 0 1 1 1 0 Fungal peroxidase extension region Yos1 PF08571.10 NODE_88994_length_181_cov_1.554795_g81053_i0reverse_frame_2 - 0.065 13.5 0.0 0.087 13.1 0.0 1.2 1 0 0 1 1 1 0 Yos1-like WSK PF03832.13 NODE_88989_length_181_cov_1.575342_g81048_i0reverse_frame_3 - 0.053 13.2 1.2 0.55 10.0 0.3 2.2 2 0 0 2 2 2 0 WSK motif TMEM214 PF10151.9 NODE_88987_length_181_cov_1.575342_g81046_i0reverse_frame_3 - 5.7 5.3 7.3 6 5.2 7.3 1.0 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator Protamine_like PF06382.11 NODE_88982_length_181_cov_1.609589_g81041_i0reverse_frame_3 - 0.056 13.6 0.1 0.059 13.6 0.1 1.0 1 0 0 1 1 1 0 Protamine and protamine like DUF1450 PF07293.11 NODE_88982_length_181_cov_1.609589_g81041_i0forward_frame_3 - 0.065 13.0 0.1 0.096 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) Mt_ATP-synt_B PF05405.14 NODE_88981_length_181_cov_1.609589_g81040_i0reverse_frame_2 - 0.11 12.1 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) KAAG1 PF15354.6 NODE_88977_length_181_cov_1.623288_g81036_i0reverse_frame_2 - 0.041 14.4 0.0 0.047 14.2 0.0 1.1 1 0 0 1 1 1 0 Kidney-associated antigen 1 FERM_M PF00373.18 NODE_88976_length_181_cov_1.623288_g81035_i0forward_frame_3 - 0.069 13.6 0.2 0.076 13.4 0.2 1.0 1 0 0 1 1 1 0 FERM central domain Mrr_N PF14338.6 NODE_88976_length_181_cov_1.623288_g81035_i0forward_frame_2 - 0.024 14.8 0.0 0.024 14.8 0.0 1.0 1 0 0 1 1 1 0 Mrr N-terminal domain Bee_toxin PF17454.2 NODE_88975_length_181_cov_1.623288_g81034_i0reverse_frame_2 - 0.015 15.3 0.9 0.019 15.0 0.9 1.3 1 0 0 1 1 1 0 Honey bee toxin DASH_Duo1 PF08651.10 NODE_88971_length_181_cov_1.630137_g81030_i0reverse_frame_2 - 0.035 13.9 0.1 0.046 13.5 0.1 1.2 1 0 0 1 1 1 0 DASH complex subunit Duo1 Toxin_14 PF07829.11 NODE_88968_length_181_cov_1.630137_g81027_i0forward_frame_3 - 1 9.4 6.6 0.41 10.6 1.2 2.2 2 0 0 2 2 2 0 Alpha-A conotoxin PIVA-like protein SopE_GEF PF07487.13 NODE_88967_length_181_cov_1.630137_g81026_i0reverse_frame_2 - 0.059 13.5 0.0 0.064 13.4 0.0 1.0 1 0 0 1 1 1 0 SopE GEF domain T2SS-T3SS_pil_N PF13629.6 NODE_88966_length_181_cov_1.630137_g81025_i0reverse_frame_3 - 0.085 12.6 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Pilus formation protein N terminal region Keratin_matx PF04579.12 NODE_88964_length_181_cov_1.630137_g81023_i0forward_frame_2 - 0.074 13.4 0.7 0.073 13.4 0.7 1.1 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein DUF4131 PF13567.6 NODE_88963_length_181_cov_1.636986_g81022_i0forward_frame_2 - 0.01 15.5 0.5 0.01 15.5 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) FeoB_associated PF12669.7 NODE_88963_length_181_cov_1.636986_g81022_i0forward_frame_2 - 0.038 14.4 0.1 0.053 13.9 0.1 1.2 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein SKG6 PF08693.10 NODE_88963_length_181_cov_1.636986_g81022_i0forward_frame_2 - 2.7 7.5 4.9 2.2 7.7 3.6 1.6 2 0 0 2 2 2 0 Transmembrane alpha-helix domain GSIII_N PF12437.8 NODE_88961_length_181_cov_1.636986_g81020_i0reverse_frame_3 - 0.089 12.5 0.3 0.092 12.4 0.3 1.0 1 0 0 1 1 1 0 Glutamine synthetase type III N terminal BTK PF00779.19 NODE_88955_length_181_cov_1.636986_g81014_i0forward_frame_2 - 0.061 13.2 4.3 0.43 10.4 1.5 2.2 2 0 0 2 2 2 0 BTK motif zf-Tim10_DDP PF02953.15 NODE_88952_length_181_cov_1.636986_g81011_i0reverse_frame_3 - 0.00057 19.5 9.8 0.00057 19.5 9.8 1.4 1 1 0 1 1 1 1 Tim10/DDP family zinc finger DUF543 PF04418.12 NODE_88952_length_181_cov_1.636986_g81011_i0forward_frame_3 - 0.17 11.9 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF543) DUF3657 PF12394.8 NODE_88950_length_181_cov_1.643836_g81009_i0forward_frame_2 - 0.024 15.2 2.2 0.028 14.9 2.2 1.1 1 0 0 1 1 1 0 Protein FAM135 DUF2680 PF10925.8 NODE_88947_length_181_cov_1.643836_g81006_i0reverse_frame_2 - 0.18 11.8 0.0 0.2 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2680) Opiods_neuropep PF01160.18 NODE_88942_length_181_cov_1.643836_g81001_i0reverse_frame_3 - 0.0015 18.6 0.1 0.0025 17.9 0.1 1.3 1 0 0 1 1 1 1 Vertebrate endogenous opioids neuropeptide Thioredoxin PF00085.20 NODE_88942_length_181_cov_1.643836_g81001_i0reverse_frame_3 - 0.1 12.6 0.3 0.12 12.4 0.3 1.1 1 0 0 1 1 1 0 Thioredoxin CysA_C_terminal PF17850.1 NODE_88940_length_181_cov_1.643836_g80999_i0reverse_frame_3 - 0.12 12.9 1.9 0.12 12.9 1.9 1.8 2 0 0 2 2 2 0 CysA C-terminal regulatory domain MIF4G PF02854.19 NODE_88939_length_181_cov_1.643836_g80998_i0reverse_frame_3 - 0.07 12.8 0.1 0.075 12.7 0.1 1.0 1 0 0 1 1 1 0 MIF4G domain Misat_Tub_SegII PF10644.9 NODE_88939_length_181_cov_1.643836_g80998_i0reverse_frame_2 - 0.12 12.7 0.1 0.12 12.7 0.1 1.1 1 0 0 1 1 1 0 Misato Segment II tubulin-like domain ASFV_J13L PF05568.11 NODE_88939_length_181_cov_1.643836_g80998_i0forward_frame_2 - 0.11 12.2 2.6 0.13 12.1 2.6 1.0 1 0 0 1 1 1 0 African swine fever virus J13L protein zf-RING_10 PF16685.5 NODE_88937_length_181_cov_1.643836_g80996_i0reverse_frame_3 - 0.12 12.5 3.1 0.16 12.2 3.1 1.2 1 0 0 1 1 1 0 zinc RING finger of MSL2 DUF2613 PF11021.8 NODE_88936_length_181_cov_1.643836_g80995_i0reverse_frame_3 - 0.07 13.3 0.0 0.091 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2613) ASTN_2_hairpin PF18577.1 NODE_88931_length_181_cov_1.664384_g80990_i0forward_frame_3 - 0.061 13.4 0.2 0.087 12.9 0.2 1.2 1 0 0 1 1 1 0 Astrotactin-2 C-terminal beta-hairpin domain Presenilin PF01080.17 NODE_88931_length_181_cov_1.664384_g80990_i0forward_frame_2 - 0.28 9.9 2.9 0.3 9.8 2.9 1.0 1 0 0 1 1 1 0 Presenilin LRR_5 PF13306.6 NODE_88928_length_181_cov_1.678082_g80987_i0reverse_frame_2 - 0.0042 17.1 2.5 0.0072 16.3 2.5 1.4 1 1 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) Gram_pos_anchor PF00746.21 NODE_88925_length_181_cov_1.684932_g80984_i0forward_frame_3 - 0.19 11.7 1.2 0.23 11.4 1.2 1.1 1 0 0 1 1 1 0 LPXTG cell wall anchor motif SR-25 PF10500.9 NODE_88925_length_181_cov_1.684932_g80984_i0forward_frame_2 - 0.45 10.1 3.3 0.44 10.1 3.3 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Helicase_C PF00271.31 NODE_88924_length_181_cov_1.684932_g80983_i0forward_frame_3 - 3e-08 34.0 0.0 4.4e-08 33.5 0.0 1.3 1 1 0 1 1 1 1 Helicase conserved C-terminal domain Bcl-2 PF00452.19 NODE_88918_length_181_cov_1.719178_g80977_i0reverse_frame_2 - 0.05 14.3 0.1 0.06 14.0 0.1 1.0 1 0 0 1 1 1 0 Apoptosis regulator proteins, Bcl-2 family DUF4173 PF13777.6 NODE_88917_length_181_cov_1.719178_g80976_i0forward_frame_3 - 0.01 15.2 0.4 0.01 15.2 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4173) Rhabdo_M2 PF04785.12 NODE_88914_length_181_cov_1.726027_g80973_i0reverse_frame_3 - 0.12 11.7 0.3 0.13 11.5 0.3 1.0 1 0 0 1 1 1 0 Rhabdovirus matrix protein M2 PMT_2 PF13231.6 NODE_88913_length_181_cov_1.732877_g80972_i0forward_frame_2 - 0.02 15.1 0.4 0.02 15.1 0.4 1.0 1 0 0 1 1 1 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Cytochrom_B561 PF03188.16 NODE_88910_length_181_cov_1.746575_g80969_i0reverse_frame_2 - 0.051 13.7 0.2 0.055 13.6 0.2 1.1 1 0 0 1 1 1 0 Eukaryotic cytochrome b561 Tna_leader PF08053.11 NODE_88910_length_181_cov_1.746575_g80969_i0reverse_frame_2 - 2.6 8.2 6.8 2.2e+02 2.1 6.8 2.3 1 1 0 1 1 1 0 Tryptophanase operon leader peptide Ribosomal_S14 PF00253.21 NODE_88908_length_181_cov_1.767123_g80967_i0forward_frame_2 - 0.064 13.0 0.1 0.089 12.6 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S14p/S29e NPM1-C PF16276.5 NODE_88907_length_181_cov_1.767123_g80966_i0reverse_frame_2 - 0.01 15.8 0.0 0.017 15.1 0.0 1.4 1 1 0 1 1 1 0 Nucleophosmin C-terminal domain zf-AD PF07776.15 NODE_88906_length_181_cov_1.767123_g80965_i0forward_frame_2 - 0.049 13.9 0.1 0.051 13.8 0.1 1.1 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) Metalloenzyme PF01676.18 NODE_88905_length_181_cov_1.773973_g80964_i0forward_frame_3 - 4.4e-17 62.3 0.0 4.7e-17 62.2 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Gin PF10764.9 NODE_88902_length_181_cov_1.801370_g80961_i0forward_frame_3 - 0.011 15.6 0.7 0.016 15.2 0.7 1.3 1 0 0 1 1 1 0 Inhibitor of sigma-G Gin MyTH4 PF00784.17 NODE_88896_length_181_cov_1.808219_g80955_i0reverse_frame_2 - 0.011 16.2 0.2 0.012 16.0 0.2 1.1 1 0 0 1 1 1 0 MyTH4 domain PHA_gran_rgn PF09650.10 NODE_88893_length_181_cov_1.815068_g80952_i0forward_frame_3 - 0.091 13.1 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) Ste5 PF11610.8 NODE_88892_length_181_cov_1.815068_g80951_i0reverse_frame_2 - 0.12 12.3 0.1 0.67 9.9 0.0 1.9 2 0 0 2 2 2 0 Scaffold protein Ste5, Fus3-binding region NDUF_B12 PF08122.12 NODE_88881_length_181_cov_1.890411_g80940_i0reverse_frame_3 - 0.11 12.6 0.6 0.18 11.9 0.6 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B12 subunit family PNPase_C PF12111.8 NODE_88881_length_181_cov_1.890411_g80940_i0reverse_frame_3 - 0.29 10.6 1.3 0.47 9.9 1.3 1.3 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal DUF2312 PF10073.9 NODE_88879_length_181_cov_1.904110_g80938_i0forward_frame_2 - 0.024 14.3 0.4 0.042 13.5 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) Lipoxygenase PF00305.19 NODE_88877_length_181_cov_1.910959_g80936_i0forward_frame_3 - 0.052 12.0 0.9 0.061 11.7 0.9 1.0 1 0 0 1 1 1 0 Lipoxygenase DUF5541 PF17695.1 NODE_88875_length_181_cov_1.910959_g80934_i0forward_frame_3 - 0.035 14.5 0.0 0.037 14.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5541) cNMP_binding PF00027.29 NODE_88874_length_181_cov_1.917808_g80933_i0reverse_frame_3 - 5.9e-05 23.1 0.0 7.6e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Baculo_FP PF03258.14 NODE_88874_length_181_cov_1.917808_g80933_i0reverse_frame_3 - 0.044 13.9 0.5 0.055 13.6 0.5 1.2 1 0 0 1 1 1 0 Baculovirus FP protein HD_5 PF13487.6 NODE_88873_length_181_cov_1.917808_g80932_i0reverse_frame_3 - 0.091 13.0 0.1 0.13 12.5 0.1 1.2 1 0 0 1 1 1 0 HD domain DUF4337 PF14235.6 NODE_88872_length_181_cov_1.917808_g80931_i0reverse_frame_2 - 0.16 12.0 0.1 0.17 12.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4637 PF15470.6 NODE_88872_length_181_cov_1.917808_g80931_i0forward_frame_2 - 0.48 10.1 5.5 0.34 10.6 4.5 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4637) Tmemb_9 PF05434.11 NODE_88868_length_181_cov_1.938356_g80927_i0forward_frame_3 - 0.058 13.3 1.6 0.064 13.1 1.6 1.0 1 0 0 1 1 1 0 TMEM9 DUF5345 PF17280.2 NODE_88868_length_181_cov_1.938356_g80927_i0forward_frame_3 - 0.08 12.9 0.6 0.092 12.7 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5345) COE1_DBD PF16422.5 NODE_88864_length_181_cov_1.972603_g80923_i0reverse_frame_2 - 0.26 10.7 0.9 0.93 8.9 0.9 1.8 1 1 0 1 1 1 0 Transcription factor COE1 DNA-binding domain DUF809 PF05663.11 NODE_88862_length_181_cov_1.986301_g80921_i0forward_frame_3 - 0.47 10.6 3.4 0.51 10.5 3.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF809) cNMP_binding PF00027.29 NODE_88861_length_181_cov_2.020548_g80920_i0forward_frame_3 - 0.00056 19.9 0.0 0.00071 19.6 0.0 1.2 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Ephrin_rec_like PF07699.13 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 0.014 15.2 11.4 0.018 14.8 5.5 2.3 1 1 1 2 2 2 0 Putative ephrin-receptor like NCD3G PF07562.14 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 0.021 14.8 7.9 0.13 12.2 3.3 2.3 1 1 2 3 3 3 0 Nine Cysteines Domain of family 3 GPCR zf-CXXC PF02008.20 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 0.1 12.7 9.8 0.28 11.2 2.9 2.1 1 1 1 2 2 2 0 CXXC zinc finger domain Prot_inhib_II PF02428.15 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 0.31 11.5 16.0 1.4 9.4 1.3 3.0 1 1 2 3 3 3 0 Potato type II proteinase inhibitor family DUF3716 PF12511.8 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 0.78 9.8 19.0 2.4 8.3 1.9 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF3716) Opy2 PF09463.10 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 2.5 8.5 14.7 3 8.2 5.3 2.8 1 1 2 3 3 3 0 Opy2 protein Herpes_UL31 PF02718.14 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 3.5 6.5 8.3 10 5.0 2.0 2.0 1 1 1 2 2 2 0 Herpesvirus UL31-like protein FhuF_C PF11575.8 NODE_88856_length_181_cov_2.061644_g80915_i0forward_frame_3 - 7.3 6.6 11.9 26 4.8 0.6 3.2 3 0 0 3 3 3 0 FhuF 2Fe-2S C-terminal domain Nrap_D4 PF17405.2 NODE_88853_length_181_cov_2.123288_g80912_i0reverse_frame_3 - 0.11 11.8 0.1 0.11 11.8 0.1 1.0 1 0 0 1 1 1 0 Nrap protein nucleotidyltransferase domain 4 ATP-synt_I PF03899.15 NODE_88846_length_181_cov_2.171233_g80905_i0forward_frame_3 - 2.2e-05 24.7 3.8 2.3e-05 24.7 3.8 1.0 1 0 0 1 1 1 1 ATP synthase I chain Chordopox_A13L PF05961.11 NODE_88845_length_181_cov_2.178082_g80904_i0reverse_frame_2 - 0.46 10.8 5.2 0.15 12.3 1.9 1.7 1 1 1 2 2 2 0 Chordopoxvirus A13L protein Fig1 PF12351.8 NODE_88845_length_181_cov_2.178082_g80904_i0forward_frame_2 - 5.4 6.9 7.3 6.8 6.6 7.3 1.3 1 1 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 TMEM154 PF15102.6 NODE_88843_length_181_cov_2.191781_g80902_i0reverse_frame_3 - 1.3 8.9 9.6 1.5 8.7 9.6 1.3 1 0 0 1 1 1 0 TMEM154 protein family MGC-24 PF05283.11 NODE_88843_length_181_cov_2.191781_g80902_i0reverse_frame_3 - 5.8 7.4 17.9 6.2 7.3 17.9 1.1 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF922 PF06037.11 NODE_88843_length_181_cov_2.191781_g80902_i0reverse_frame_3 - 7.1 6.4 8.2 7.8 6.3 8.2 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF922) ODV-E18 PF10717.9 NODE_88843_length_181_cov_2.191781_g80902_i0forward_frame_2 - 2.6 8.0 4.8 3.1 7.7 4.8 1.1 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Sirohm_synth_M PF14824.6 NODE_88842_length_181_cov_2.191781_g80901_i0forward_frame_3 - 0.091 12.2 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Sirohaem biosynthesis protein central PAS_9 PF13426.7 NODE_88838_length_181_cov_2.205479_g80897_i0forward_frame_3 - 0.065 13.5 0.0 0.077 13.3 0.0 1.0 1 0 0 1 1 1 0 PAS domain DUF5022 PF16425.5 NODE_88836_length_181_cov_2.226027_g80895_i0reverse_frame_3 - 0.021 14.3 0.0 0.021 14.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5022) BCMA-Tall_bind PF09257.10 NODE_88833_length_181_cov_2.273973_g80892_i0reverse_frame_3 - 0.024 14.7 0.9 0.033 14.3 0.9 1.3 1 0 0 1 1 1 0 BCMA, TALL-1 binding Filament_head PF04732.14 NODE_88833_length_181_cov_2.273973_g80892_i0forward_frame_3 - 0.17 12.8 0.0 0.25 12.3 0.0 1.2 1 0 0 1 1 1 0 Intermediate filament head (DNA binding) region Hum_adeno_E3A PF05393.11 NODE_88825_length_181_cov_2.363014_g80884_i0reverse_frame_2 - 0.37 10.8 6.2 0.41 10.6 6.2 1.1 1 0 0 1 1 1 0 Human adenovirus early E3A glycoprotein Paramecium_SA PF01508.16 NODE_88825_length_181_cov_2.363014_g80884_i0forward_frame_3 - 0.72 10.3 5.7 1 9.8 5.7 1.3 1 0 0 1 1 1 0 Paramecium surface antigen domain FYVE PF01363.21 NODE_88823_length_181_cov_2.376712_g80882_i0reverse_frame_3 - 0.093 12.9 13.7 0.11 12.7 13.7 1.1 1 0 0 1 1 1 0 FYVE zinc finger ChapFlgA PF13144.6 NODE_88815_length_181_cov_2.458904_g80874_i0reverse_frame_3 - 0.0013 18.8 0.0 0.0014 18.7 0.0 1.0 1 0 0 1 1 1 1 Chaperone for flagella basal body P-ring formation zf-C2H2_4 PF13894.6 NODE_88814_length_181_cov_2.465753_g80873_i0forward_frame_2 - 0.23 12.4 5.6 2.2 9.3 1.6 3.4 2 2 0 2 2 2 0 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_88814_length_181_cov_2.465753_g80873_i0forward_frame_2 - 0.41 11.2 6.5 1.8 9.2 1.9 2.9 2 2 0 2 2 2 0 Zinc finger, C2H2 type zf-RING_11 PF17123.5 NODE_88810_length_181_cov_2.506849_g80869_i0reverse_frame_3 - 0.012 15.3 0.6 0.012 15.3 0.6 1.8 3 0 0 3 3 3 0 RING-like zinc finger MTHFR_C PF12225.8 NODE_88809_length_181_cov_2.554795_g80868_i0reverse_frame_2 - 0.014 15.1 5.1 0.014 15.0 5.1 1.1 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal MIT_LIKE_ACTX PF17556.2 NODE_88808_length_181_cov_2.582192_g80867_i0forward_frame_3 - 0.012 16.2 1.5 0.017 15.7 1.5 1.3 1 0 0 1 1 1 0 MIT-like atracotoxin family Lip_A_acyltrans PF03279.13 NODE_88806_length_181_cov_2.623288_g80865_i0reverse_frame_3 - 0.045 12.9 0.0 0.046 12.9 0.0 1.0 1 0 0 1 1 1 0 Bacterial lipid A biosynthesis acyltransferase Peptidase_S64 PF08192.11 NODE_88806_length_181_cov_2.623288_g80865_i0reverse_frame_3 - 0.06 11.8 0.0 0.069 11.6 0.0 1.0 1 0 0 1 1 1 0 Peptidase family S64 Tsp45I PF06300.12 NODE_88806_length_181_cov_2.623288_g80865_i0reverse_frame_3 - 0.067 12.7 0.0 0.073 12.6 0.0 1.1 1 0 0 1 1 1 0 Tsp45I type II restriction enzyme # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks456.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks456.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks456.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks456.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:45:46 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MYO10_CC PF16735.5 NODE_88802_length_181_cov_2.671233_g80861_i0forward_frame_3 - 0.019 15.0 5.2 0.43 10.7 0.4 2.2 1 1 1 2 2 2 0 Unconventional myosin-X coiled coil domain Ax_dynein_light PF10211.9 NODE_88802_length_181_cov_2.671233_g80861_i0forward_frame_3 - 0.033 14.1 7.6 0.036 14.0 7.6 1.0 1 0 0 1 1 1 0 Axonemal dynein light chain PTN_MK_C PF01091.18 NODE_88801_length_181_cov_2.691781_g80860_i0reverse_frame_3 - 0.027 14.8 0.7 0.037 14.4 0.7 1.3 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, C-terminal domain SNARE PF05739.19 NODE_88798_length_181_cov_2.726027_g80857_i0reverse_frame_2 - 0.64 10.1 5.5 1 9.4 5.5 1.3 1 0 0 1 1 1 0 SNARE domain IL17R_D_N PF16742.5 NODE_88795_length_181_cov_2.739726_g80854_i0reverse_frame_3 - 0.02 14.9 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 N-terminus of interleukin 17 receptor D ACT_3 PF10000.9 NODE_88795_length_181_cov_2.739726_g80854_i0reverse_frame_2 - 0.072 13.0 0.1 0.095 12.6 0.1 1.2 1 0 0 1 1 1 0 ACT domain Zip PF02535.22 NODE_88795_length_181_cov_2.739726_g80854_i0forward_frame_3 - 1.4e-08 34.3 0.3 1.4e-08 34.3 0.3 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter TCR PF03638.15 NODE_88795_length_181_cov_2.739726_g80854_i0forward_frame_2 - 0.8 10.1 24.6 0.38 11.1 14.9 2.2 1 1 1 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain DUF1179 PF06678.11 NODE_88793_length_181_cov_2.787671_g80852_i0forward_frame_2 - 0.00053 19.9 0.1 0.00061 19.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1179) Sas6_CC PF18594.1 NODE_88789_length_181_cov_2.917808_g80848_i0reverse_frame_2 - 0.55 10.1 3.5 2.7 7.8 0.3 2.2 2 0 0 2 2 2 0 Sas6/XLF/XRCC4 coiled-coil domain Phage_CI_repr PF07022.13 NODE_88787_length_181_cov_3.013699_g80846_i0reverse_frame_3 - 0.18 11.9 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain AbiEi_3_N PF17194.4 NODE_88785_length_181_cov_3.102740_g80844_i0forward_frame_3 - 0.082 12.9 0.0 0.096 12.7 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin N-terminal domain SWIM PF04434.17 NODE_88781_length_181_cov_3.157534_g80840_i0forward_frame_3 - 0.93 9.2 11.9 3.2 7.5 1.9 2.3 2 0 0 2 2 2 0 SWIM zinc finger YdiH PF15930.5 NODE_88780_length_181_cov_3.184932_g80839_i0forward_frame_3 - 0.13 12.4 0.0 0.26 11.5 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function Pacifastin_I PF05375.13 NODE_88771_length_181_cov_3.568493_g80830_i0forward_frame_3 - 0.084 12.6 3.0 0.13 12.0 3.0 1.2 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) Orthoreo_P10 PF07204.11 NODE_88768_length_181_cov_3.794521_g80827_i0reverse_frame_3 - 0.13 12.2 3.2 0.14 12.2 3.2 1.1 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 FLYWCH PF04500.16 NODE_88768_length_181_cov_3.794521_g80827_i0forward_frame_3 - 0.041 14.0 0.3 0.048 13.8 0.3 1.1 1 0 0 1 1 1 0 FLYWCH zinc finger domain WDCP PF15390.6 NODE_88767_length_181_cov_3.910959_g80826_i0reverse_frame_2 - 0.13 10.6 0.0 0.14 10.6 0.0 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Ribosomal_S24e PF01282.19 NODE_88767_length_181_cov_3.910959_g80826_i0forward_frame_3 - 0.072 13.1 0.0 0.094 12.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S24e Babuvirus_MP PF07234.11 NODE_88762_length_181_cov_7.267123_g80821_i0forward_frame_2 - 1.5 9.0 4.3 1.6 8.9 4.3 1.1 1 0 0 1 1 1 0 Movement and RNA silencing protein Antimicrobial23 PF16048.5 NODE_88761_length_181_cov_7.424658_g80820_i0reverse_frame_3 - 0.68 9.7 6.0 1.3 8.8 6.0 1.4 1 0 0 1 1 1 0 Frog antimicrobial peptide SH3_19 PF18597.1 NODE_88761_length_181_cov_7.424658_g80820_i0forward_frame_3 - 0.12 12.3 0.2 0.17 11.7 0.2 1.3 1 0 0 1 1 1 0 Myosin X N-terminal SH3 domain MTHFR_C PF12225.8 NODE_88759_length_181_cov_8.363014_g80818_i0reverse_frame_3 - 0.29 10.8 7.4 0.33 10.6 7.4 1.1 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal BssB_TutG PF18512.1 NODE_88759_length_181_cov_8.363014_g80818_i0reverse_frame_2 - 0.029 14.2 0.7 0.044 13.7 0.7 1.3 1 0 0 1 1 1 0 Benzylsuccinate synthase beta subunit Pox_Ag35 PF03286.14 NODE_88756_length_181_cov_13.554795_g80815_i0reverse_frame_2 - 0.38 10.5 5.8 0.43 10.4 5.8 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein WCOR413 PF05562.11 NODE_88751_length_181_cov_17.664384_g80810_i0forward_frame_2 - 0.054 13.4 1.5 0.066 13.2 1.5 1.1 1 0 0 1 1 1 0 Cold acclimation protein WCOR413 DUF4131 PF13567.6 NODE_88751_length_181_cov_17.664384_g80810_i0forward_frame_2 - 7.8 6.1 7.0 8.4 6.0 7.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) UXS1_N PF11803.8 NODE_88750_length_181_cov_18.116438_g80809_i0forward_frame_2 - 0.05 14.0 0.0 0.062 13.7 0.0 1.2 1 0 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal DUF4172 PF13776.6 NODE_88748_length_181_cov_18.815068_g80807_i0reverse_frame_3 - 0.0066 16.8 0.1 0.0076 16.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4172) HHH_2 PF12826.7 NODE_88747_length_181_cov_19.815068_g80806_i0forward_frame_2 - 0.11 12.6 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF2628 PF10947.8 NODE_88746_length_181_cov_20.630137_g80805_i0forward_frame_2 - 0.14 12.5 2.4 0.15 12.4 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) YfhO PF09586.10 NODE_88746_length_181_cov_20.630137_g80805_i0forward_frame_2 - 0.58 8.3 6.3 0.6 8.3 6.3 1.0 1 0 0 1 1 1 0 Bacterial membrane protein YfhO SMBP PF16785.5 NODE_88743_length_181_cov_22.232877_g80802_i0forward_frame_3 - 0.0047 17.1 0.0 0.0051 17.0 0.0 1.0 1 0 0 1 1 1 1 Small metal-binding protein GntP_permease PF02447.16 NODE_88740_length_181_cov_23.657534_g80799_i0reverse_frame_3 - 0.047 12.4 5.0 0.052 12.2 5.0 1.0 1 0 0 1 1 1 0 GntP family permease NAD4L PF06235.11 NODE_88738_length_181_cov_25.500000_g80797_i0forward_frame_2 - 0.052 13.5 6.7 0.067 13.2 6.7 1.2 1 0 0 1 1 1 0 NADH dehydrogenase subunit 4L (NAD4L) DUF2052 PF09747.9 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 0.072 13.2 15.5 0.074 13.2 15.5 1.0 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) GEN1_C PF18380.1 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 0.28 12.1 11.7 0.33 11.9 11.7 1.1 1 0 0 1 1 1 0 Holliday junction resolvase Gen1 C-terminal domain DUF4611 PF15387.6 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 0.52 10.6 13.9 0.6 10.4 13.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) CobT PF06213.12 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 0.68 9.3 14.9 0.7 9.2 14.9 1.0 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT RNA_polI_A34 PF08208.11 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 1.1 9.4 13.9 1.1 9.3 13.9 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Voldacs PF03517.13 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 1.2 9.3 10.4 1.3 9.1 10.4 1.2 1 0 0 1 1 1 0 Regulator of volume decrease after cellular swelling Cnd2 PF05786.14 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 2.6 6.6 13.9 2.9 6.4 13.9 1.0 1 0 0 1 1 1 0 Condensin complex subunit 2 FAM176 PF14851.6 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_3 - 2.7 7.6 12.0 2.9 7.5 12.0 1.2 1 0 0 1 1 1 0 FAM176 family FXMRP1_C_core PF12235.8 NODE_88737_length_181_cov_25.671233_g80796_i0forward_frame_2 - 1.2 9.8 15.0 1.5 9.5 15.0 1.3 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal DUF2156 PF09924.9 NODE_88735_length_181_cov_26.349315_g80794_i0reverse_frame_2 - 0.096 11.7 0.0 0.1 11.6 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2156) zf-RING_5 PF14634.6 NODE_88733_length_181_cov_27.410959_g80792_i0forward_frame_2 - 0.0088 16.0 3.2 0.012 15.6 3.2 1.2 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 NODE_88733_length_181_cov_27.410959_g80792_i0forward_frame_2 - 0.013 15.3 0.7 0.018 14.9 0.7 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-MIZ PF02891.20 NODE_88733_length_181_cov_27.410959_g80792_i0forward_frame_2 - 0.036 13.8 3.5 0.045 13.5 3.5 1.2 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger Glyco_hydro_80 PF13647.6 NODE_88727_length_181_cov_30.424658_g80786_i0reverse_frame_3 - 0.11 11.9 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A DUF3335 PF11814.8 NODE_88727_length_181_cov_30.424658_g80786_i0forward_frame_3 - 0.092 12.2 0.1 0.092 12.2 0.1 1.0 1 0 0 1 1 1 0 Peptidase_C39 like family Prok-RING_1 PF14446.6 NODE_88726_length_181_cov_30.986301_g80785_i0forward_frame_3 - 0.0062 16.4 0.3 0.0089 15.9 0.3 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 Imm61 PF15598.6 NODE_88723_length_181_cov_32.595890_g80782_i0forward_frame_3 - 0.032 14.1 0.0 0.035 14.0 0.0 1.0 1 0 0 1 1 1 0 Immunity protein 61 DUF2721 PF11026.8 NODE_88716_length_181_cov_39.328767_g80775_i0reverse_frame_3 - 0.07 13.0 0.9 0.08 12.8 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Vma12 PF11712.8 NODE_88716_length_181_cov_39.328767_g80775_i0reverse_frame_3 - 0.25 11.4 0.4 0.28 11.2 0.4 1.1 1 0 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF1485 PF07364.12 NODE_88716_length_181_cov_39.328767_g80775_i0forward_frame_3 - 0.094 12.0 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase family M81 DUF805 PF05656.14 NODE_88712_length_181_cov_42.904110_g80771_i0reverse_frame_3 - 0.89 10.0 3.5 1 9.8 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF805) zf-ISL3 PF14690.6 NODE_88710_length_181_cov_44.671233_g80769_i0reverse_frame_2 - 0.032 14.9 1.3 0.061 14.0 1.3 1.5 1 0 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Helicase_C_2 PF13307.6 NODE_88707_length_181_cov_50.164384_g80766_i0reverse_frame_2 - 0.16 12.1 0.0 0.18 11.9 0.0 1.1 1 0 0 1 1 1 0 Helicase C-terminal domain RRN3 PF05327.11 NODE_88701_length_181_cov_61.369863_g80760_i0forward_frame_2 - 4.3 5.8 7.3 4.5 5.7 7.3 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 AAA_lid_11 PF18198.1 NODE_88698_length_181_cov_65.184932_g80757_i0forward_frame_3 - 0.055 13.3 0.0 0.055 13.3 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain AAA lid domain DUF5318 PF17249.2 NODE_88698_length_181_cov_65.184932_g80757_i0forward_frame_3 - 0.067 13.0 0.1 0.07 12.9 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5318) DUF3863 PF12979.7 NODE_88698_length_181_cov_65.184932_g80757_i0forward_frame_3 - 0.15 10.9 0.0 0.15 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3863) Piezo_RRas_bdg PF12166.8 NODE_88695_length_181_cov_76.095890_g80754_i0forward_frame_3 - 0.45 9.7 2.8 0.49 9.6 2.8 1.0 1 0 0 1 1 1 0 Piezo non-specific cation channel, R-Ras-binding domain Stealth_CR4 PF17103.5 NODE_88695_length_181_cov_76.095890_g80754_i0forward_frame_2 - 0.064 13.2 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 Stealth protein CR4, conserved region 4 Amnionless PF14828.6 NODE_88694_length_181_cov_76.534247_g80753_i0forward_frame_2 - 4 6.2 6.6 4.3 6.1 6.6 1.0 1 0 0 1 1 1 0 Amnionless Cadherin_C_2 PF16492.5 NODE_88688_length_181_cov_112.643836_g80747_i0reverse_frame_3 - 0.052 14.3 0.0 0.056 14.2 0.0 1.1 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal MWFE PF15879.5 NODE_88686_length_181_cov_115.739726_g80745_i0reverse_frame_3 - 0.044 14.0 0.2 0.054 13.7 0.2 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase MWFE subunit PUMA PF15826.5 NODE_88684_length_181_cov_120.089041_g80743_i0forward_frame_2 - 0.079 13.1 0.4 0.085 13.0 0.4 1.0 1 0 0 1 1 1 0 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis DUF3446 PF11928.8 NODE_88683_length_181_cov_131.643836_g80742_i0forward_frame_2 - 0.11 12.8 8.7 0.12 12.7 8.7 1.1 1 0 0 1 1 1 0 Early growth response N-terminal domain TFIIB_C_1 PF18542.1 NODE_88676_length_181_cov_168.349315_g80735_i0reverse_frame_2 - 0.16 12.0 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Transcription factor IIB C-terminal module 1 Lantibiotic_a PF14867.6 NODE_88676_length_181_cov_168.349315_g80735_i0forward_frame_2 - 0.0089 15.7 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 Lantibiotic alpha DUF3307 PF11750.8 NODE_88673_length_181_cov_195.808219_g80732_i0forward_frame_3 - 0.083 13.0 0.0 0.093 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3307) WRW PF10206.9 NODE_88673_length_181_cov_195.808219_g80732_i0forward_frame_2 - 0.15 12.5 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial F1F0-ATP synthase, subunit f Rhodanese_C PF12368.8 NODE_88671_length_181_cov_285.061644_g80730_i0reverse_frame_2 - 1.7 9.1 17.2 2.1 8.8 17.2 1.1 1 0 0 1 1 1 0 Rhodanase C-terminal DUF5480 PF17576.2 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.0085 16.0 0.0 0.0097 15.9 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF5480) DAP10 PF07213.11 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.045 13.7 0.1 0.046 13.7 0.1 1.1 1 0 0 1 1 1 0 DAP10 membrane protein TMEM132D_C PF15706.5 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.078 12.8 0.5 0.086 12.6 0.5 1.1 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TMEM51 PF15345.6 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.11 12.4 0.0 0.11 12.4 0.0 1.0 1 0 0 1 1 1 0 Transmembrane protein 51 TMEM154 PF15102.6 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.12 12.3 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 TMEM154 protein family DUF4051 PF13260.6 NODE_88667_length_182_cov_0.802721_g80726_i0forward_frame_3 - 0.12 12.1 0.1 0.16 11.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4051) PilM PF07419.12 NODE_88666_length_182_cov_0.809524_g80725_i0reverse_frame_3 - 0.017 15.3 0.0 0.021 15.0 0.0 1.1 1 0 0 1 1 1 0 PilM PTN_MK_C PF01091.18 NODE_88664_length_182_cov_0.816327_g80723_i0reverse_frame_2 - 0.048 14.1 1.6 0.056 13.8 1.6 1.3 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, C-terminal domain Sulfate_transp PF00916.20 NODE_88663_length_182_cov_0.816327_g80722_i0forward_frame_3 - 0.0002 20.2 0.0 0.00023 20.0 0.0 1.0 1 0 0 1 1 1 1 Sulfate permease family CARD_2 PF16739.5 NODE_88662_length_182_cov_0.816327_g80721_i0forward_frame_2 - 0.099 12.6 0.2 0.17 11.9 0.0 1.4 1 1 1 2 2 2 0 Caspase recruitment domain Delta_lysin PF05372.11 NODE_88657_length_182_cov_0.816327_g80716_i0reverse_frame_3 - 0.078 12.3 1.2 0.078 12.3 1.2 1.7 2 0 0 2 2 2 0 Delta lysin family Scramblase PF03803.15 NODE_88651_length_182_cov_0.816327_g80710_i0reverse_frame_2 - 0.036 13.4 0.2 0.036 13.4 0.2 1.0 1 0 0 1 1 1 0 Scramblase DUF3593 PF12159.8 NODE_88651_length_182_cov_0.816327_g80710_i0forward_frame_3 - 0.14 12.2 0.9 0.14 12.2 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3593) TT_ORF1 PF02956.14 NODE_88647_length_182_cov_0.870748_g80706_i0forward_frame_2 - 1.5 7.4 7.6 1.5 7.4 7.6 1.0 1 0 0 1 1 1 0 TT viral orf 1 Chromosome_seg PF13889.6 NODE_88645_length_182_cov_0.877551_g80704_i0forward_frame_3 - 0.045 13.9 0.1 0.053 13.7 0.1 1.2 1 0 0 1 1 1 0 Chromosome segregation during meiosis Tap-RNA_bind PF09162.10 NODE_88640_length_182_cov_0.911565_g80699_i0forward_frame_2 - 0.038 13.8 0.1 0.064 13.1 0.1 1.4 1 0 0 1 1 1 0 Tap, RNA-binding Fst_toxin PF13955.6 NODE_88632_length_182_cov_1.000000_g80691_i0reverse_frame_3 - 0.007 16.2 0.1 0.017 15.0 0.1 1.7 1 0 0 1 1 1 1 Toxin Fst, type I toxin-antitoxin system DUF2110 PF09883.9 NODE_88632_length_182_cov_1.000000_g80691_i0forward_frame_2 - 0.16 11.5 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2110) Toxin_3 PF00537.18 NODE_88624_length_182_cov_1.040816_g80683_i0forward_frame_3 - 0.094 12.9 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Scorpion toxin-like domain V-ATPase_H_N PF03224.14 NODE_88619_length_182_cov_1.047619_g80678_i0reverse_frame_2 - 0.054 12.8 0.1 0.057 12.7 0.1 1.0 1 0 0 1 1 1 0 V-ATPase subunit H Med3 PF11593.8 NODE_88616_length_182_cov_1.068027_g80675_i0reverse_frame_2 - 0.028 13.6 3.4 0.031 13.5 3.4 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal PDR_assoc PF08370.11 NODE_88616_length_182_cov_1.068027_g80675_i0forward_frame_3 - 0.042 13.6 0.7 0.055 13.2 0.7 1.2 1 0 0 1 1 1 0 Plant PDR ABC transporter associated PAN_2 PF08276.11 NODE_88611_length_182_cov_1.074830_g80670_i0reverse_frame_2 - 0.0059 16.7 0.9 0.0059 16.7 0.9 2.0 1 1 1 2 2 2 1 PAN-like domain Nodulin PF02451.15 NODE_88608_length_182_cov_1.074830_g80667_i0reverse_frame_3 - 0.028 13.9 0.1 0.029 13.9 0.1 1.0 1 0 0 1 1 1 0 Nodulin DUF4131 PF13567.6 NODE_88608_length_182_cov_1.074830_g80667_i0forward_frame_3 - 0.071 12.8 1.1 0.075 12.7 1.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) TMEM40 PF15817.5 NODE_88608_length_182_cov_1.074830_g80667_i0forward_frame_2 - 0.043 13.6 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 40 family NADH_u_ox_C PF12853.7 NODE_88607_length_182_cov_1.074830_g80666_i0forward_frame_3 - 0.094 12.7 0.0 0.1 12.6 0.0 1.1 1 0 0 1 1 1 0 C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit SRR1 PF07985.12 NODE_88606_length_182_cov_1.074830_g80665_i0reverse_frame_3 - 4.4 7.4 6.6 3 8.0 3.1 2.0 1 1 1 2 2 2 0 SRR1 RepA1_leader PF08048.12 NODE_88602_length_182_cov_1.081633_g80661_i0reverse_frame_3 - 0.032 14.5 0.1 0.061 13.6 0.1 1.5 1 0 0 1 1 1 0 Tap RepA1 leader peptide TniQ PF06527.11 NODE_88602_length_182_cov_1.081633_g80661_i0reverse_frame_3 - 0.63 10.8 8.0 0.74 10.5 8.0 1.1 1 0 0 1 1 1 0 TniQ zf-RING_4 PF14570.6 NODE_88600_length_182_cov_1.081633_g80659_i0reverse_frame_2 - 2.8 7.8 16.1 0.083 12.7 8.8 2.0 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain FXa_inhibition PF14670.6 NODE_88599_length_182_cov_1.081633_g80658_i0forward_frame_2 - 0.18 12.1 2.6 0.22 11.8 2.6 1.1 1 0 0 1 1 1 0 Coagulation Factor Xa inhibitory site DUF1700 PF08006.11 NODE_88598_length_182_cov_1.081633_g80657_i0reverse_frame_2 - 0.25 10.8 3.6 0.27 10.7 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) NADH_B2 PF14813.6 NODE_88598_length_182_cov_1.081633_g80657_i0forward_frame_2 - 0.12 12.1 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 NADH dehydrogenase 1 beta subcomplex subunit 2 CEBP1_N PF16368.5 NODE_88596_length_182_cov_1.081633_g80655_i0forward_frame_3 - 0.05 13.1 0.1 0.055 13.0 0.1 1.0 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein 1 N-terminus Cytomega_US3 PF05963.11 NODE_88594_length_182_cov_1.081633_g80653_i0reverse_frame_2 - 0.14 11.8 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Cytomegalovirus US3 protein DUF728 PF05304.12 NODE_88594_length_182_cov_1.081633_g80653_i0forward_frame_2 - 0.076 12.9 0.1 0.084 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF728) Tme5_EGF_like PF09064.10 NODE_88593_length_182_cov_1.081633_g80652_i0reverse_frame_3 - 2.6 8.0 7.6 2.5 8.1 0.1 2.3 2 0 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like SurA_N PF09312.11 NODE_88586_length_182_cov_1.081633_g80645_i0forward_frame_3 - 0.0035 17.4 0.6 0.078 13.1 0.1 2.0 2 0 0 2 2 2 1 SurA N-terminal domain SurA_N_3 PF13624.6 NODE_88586_length_182_cov_1.081633_g80645_i0forward_frame_3 - 0.11 12.3 0.9 1.5 8.6 1.0 1.9 1 1 0 1 1 1 0 SurA N-terminal domain S-AdoMet_synt_N PF00438.20 NODE_88586_length_182_cov_1.081633_g80645_i0forward_frame_3 - 0.14 12.9 0.1 0.18 12.5 0.1 1.2 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, N-terminal domain DUF2892 PF11127.8 NODE_88585_length_182_cov_1.081633_g80644_i0reverse_frame_2 - 0.12 12.4 1.5 0.16 12.1 1.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2892) TBCA PF02970.16 NODE_88579_length_182_cov_1.081633_g80638_i0reverse_frame_3 - 0.23 11.8 0.0 0.24 11.7 0.0 1.1 1 0 0 1 1 1 0 Tubulin binding cofactor A Ank_5 PF13857.6 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 2.6e-15 56.3 0.5 2.8e-07 30.7 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 1.7e-14 53.5 0.3 5.2e-06 26.7 0.0 2.0 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 2.3e-13 50.6 0.1 3e-13 50.2 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 5.5e-13 49.1 0.1 6.2e-13 49.0 0.1 1.0 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 1.6e-12 46.4 0.1 8.6e-06 25.7 0.0 2.0 2 0 0 2 2 2 2 Ankyrin repeat SpoIIP PF07454.11 NODE_88578_length_182_cov_1.081633_g80637_i0forward_frame_3 - 0.096 12.1 0.1 0.25 10.8 0.0 1.6 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) KRBA1 PF15287.6 NODE_88573_length_182_cov_1.088435_g80632_i0reverse_frame_3 - 0.27 11.0 0.5 0.38 10.5 0.5 1.2 1 0 0 1 1 1 0 KRBA1 family repeat Zf_RING PF16744.5 NODE_88573_length_182_cov_1.088435_g80632_i0reverse_frame_2 - 0.015 15.4 0.8 0.017 15.2 0.8 1.1 1 0 0 1 1 1 0 KIAA1045 RING finger zf-C2HC_2 PF13913.6 NODE_88573_length_182_cov_1.088435_g80632_i0reverse_frame_2 - 0.066 13.1 3.5 0.16 11.9 3.5 1.8 1 1 0 1 1 1 0 zinc-finger of a C2HC-type HOOK PF05622.12 NODE_88572_length_182_cov_1.088435_g80631_i0forward_frame_3 - 0.058 11.5 0.0 0.058 11.5 0.0 1.0 1 0 0 1 1 1 0 HOOK protein SLC3A2_N PF16028.5 NODE_88564_length_182_cov_1.088435_g80623_i0forward_frame_2 - 0.098 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Glyco_hydro_71 PF03659.14 NODE_88560_length_182_cov_1.088435_g80619_i0forward_frame_3 - 0.088 11.6 0.0 0.088 11.6 0.0 1.0 1 0 0 1 1 1 0 Glycosyl hydrolase family 71 TFIIB PF00382.19 NODE_88559_length_182_cov_1.088435_g80618_i0forward_frame_2 - 0.023 14.7 0.1 0.031 14.3 0.1 1.2 1 0 0 1 1 1 0 Transcription factor TFIIB repeat SMP_C2CD2L PF18696.1 NODE_88555_length_182_cov_1.088435_g80614_i0forward_frame_2 - 0.046 13.5 0.0 0.054 13.3 0.0 1.0 1 0 0 1 1 1 0 Synaptotagmin-like, mitochondrial and lipid-binding domain Alpha_adaptin_C PF02296.16 NODE_88548_length_182_cov_1.088435_g80607_i0forward_frame_2 - 0.084 13.1 0.0 0.084 13.1 0.0 1.1 1 0 0 1 1 1 0 Alpha adaptin AP2, C-terminal domain PMP1_2 PF08114.11 NODE_88545_length_182_cov_1.088435_g80604_i0reverse_frame_2 - 0.34 10.7 2.0 0.55 10.0 2.0 1.3 1 0 0 1 1 1 0 ATPase proteolipid family MHC_II_alpha PF00993.20 NODE_88545_length_182_cov_1.088435_g80604_i0forward_frame_3 - 0.054 13.2 0.0 0.079 12.6 0.0 1.3 1 0 0 1 1 1 0 Class II histocompatibility antigen, alpha domain DUF962 PF06127.11 NODE_88540_length_182_cov_1.088435_g80599_i0reverse_frame_3 - 1.9 8.6 5.3 2.3 8.4 5.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) MNE1 PF13762.6 NODE_88540_length_182_cov_1.088435_g80599_i0reverse_frame_2 - 0.046 13.7 0.2 0.05 13.6 0.2 1.1 1 0 0 1 1 1 0 Mitochondrial splicing apparatus component Thionin PF00321.17 NODE_88540_length_182_cov_1.088435_g80599_i0reverse_frame_2 - 0.062 13.8 0.1 0.11 13.0 0.1 1.5 1 0 0 1 1 1 0 Plant thionin DUF4807 PF16065.5 NODE_88540_length_182_cov_1.088435_g80599_i0reverse_frame_2 - 0.072 12.8 0.1 0.082 12.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4807) Tektin PF03148.14 NODE_88538_length_182_cov_1.088435_g80597_i0forward_frame_2 - 0.033 12.9 0.5 0.034 12.9 0.5 1.0 1 0 0 1 1 1 0 Tektin family Mog1 PF04603.12 NODE_88534_length_182_cov_1.088435_g80593_i0reverse_frame_3 - 0.08 13.3 0.0 0.08 13.3 0.0 1.0 1 0 0 1 1 1 0 Ran-interacting Mog1 protein DUF4120 PF13496.6 NODE_88533_length_182_cov_1.088435_g80592_i0reverse_frame_3 - 0.071 13.5 0.1 0.071 13.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4120) DUF2770 PF10968.8 NODE_88533_length_182_cov_1.088435_g80592_i0reverse_frame_2 - 0.065 13.2 0.7 0.11 12.5 0.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2770) Gln-synt_C PF00120.24 NODE_88532_length_182_cov_1.088435_g80591_i0forward_frame_2 - 0.00092 18.3 0.0 0.0013 17.8 0.0 1.2 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain DUF1010 PF06231.11 NODE_88527_length_182_cov_1.088435_g80586_i0forward_frame_3 - 0.02 15.4 0.5 0.022 15.3 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) DUF5534 PF17686.1 NODE_88522_length_182_cov_1.088435_g80581_i0forward_frame_3 - 0.22 11.7 0.9 0.24 11.6 0.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5534) Presenilin PF01080.17 NODE_88522_length_182_cov_1.088435_g80581_i0forward_frame_2 - 0.65 8.7 10.8 0.71 8.6 10.8 1.0 1 0 0 1 1 1 0 Presenilin Pex24p PF06398.11 NODE_88522_length_182_cov_1.088435_g80581_i0forward_frame_2 - 5.3 5.9 6.8 5.6 5.9 6.8 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin TP53IP5 PF15331.6 NODE_88521_length_182_cov_1.088435_g80580_i0forward_frame_2 - 0.045 13.9 1.1 0.044 13.9 1.1 1.0 1 0 0 1 1 1 0 Cellular tumour antigen p53-inducible 5 DUF5508 PF17621.2 NODE_88520_length_182_cov_1.088435_g80579_i0forward_frame_3 - 0.14 11.3 0.6 0.15 11.2 0.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5508) YecR PF13992.6 NODE_88518_length_182_cov_1.088435_g80577_i0reverse_frame_3 - 0.023 15.0 3.2 0.026 14.8 3.2 1.2 1 0 0 1 1 1 0 YecR-like lipoprotein DAG_kinase_N PF14513.6 NODE_88513_length_182_cov_1.088435_g80572_i0forward_frame_2 - 0.17 12.1 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus zinc_ribbon_6 PF14599.6 NODE_88512_length_182_cov_1.088435_g80571_i0reverse_frame_2 - 0.043 13.8 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 Zinc-ribbon DUF1289 PF06945.13 NODE_88512_length_182_cov_1.088435_g80571_i0forward_frame_3 - 0.015 15.1 0.5 0.022 14.6 0.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1289) Ycf4 PF02392.16 NODE_88506_length_182_cov_1.088435_g80565_i0forward_frame_2 - 0.098 12.2 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Ycf4 Stn1_C PF12659.7 NODE_88506_length_182_cov_1.088435_g80565_i0forward_frame_2 - 0.16 11.9 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Telomere capping C-terminal wHTH Dpy-30 PF05186.13 NODE_88505_length_182_cov_1.088435_g80564_i0reverse_frame_2 - 0.042 13.6 0.1 0.065 12.9 0.1 1.4 1 0 0 1 1 1 0 Dpy-30 motif EF-hand_5 PF13202.6 NODE_88504_length_182_cov_1.088435_g80563_i0forward_frame_2 - 0.0079 15.6 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 NODE_88504_length_182_cov_1.088435_g80563_i0forward_frame_2 - 0.074 12.6 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 EF hand Dickkopf_N PF04706.12 NODE_88503_length_182_cov_1.088435_g80562_i0reverse_frame_3 - 0.048 14.1 9.2 0.077 13.5 9.2 1.3 1 0 0 1 1 1 0 Dickkopf N-terminal cysteine-rich region zf-CRD PF17979.1 NODE_88503_length_182_cov_1.088435_g80562_i0forward_frame_3 - 0.28 11.3 5.3 0.34 11.0 5.3 1.1 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions zf-AN1 PF01428.16 NODE_88503_length_182_cov_1.088435_g80562_i0forward_frame_3 - 0.72 10.1 11.9 2.3 8.4 11.9 1.9 1 1 0 1 1 1 0 AN1-like Zinc finger zf-CW PF07496.15 NODE_88503_length_182_cov_1.088435_g80562_i0forward_frame_3 - 0.91 9.6 8.9 1.5 8.9 8.9 1.5 1 1 0 1 1 1 0 CW-type Zinc Finger ADD_DNMT3 PF17980.1 NODE_88503_length_182_cov_1.088435_g80562_i0forward_frame_3 - 2.3 8.3 9.9 0.84 9.7 6.0 1.9 2 0 0 2 2 2 0 Cysteine rich ADD domain in DNMT3 Zn-ribbon_8 PF09723.10 NODE_88502_length_182_cov_1.088435_g80561_i0forward_frame_2 - 0.16 12.1 0.5 0.2 11.8 0.5 1.2 1 0 0 1 1 1 0 Zinc ribbon domain Plug_translocon PF10559.9 NODE_88500_length_182_cov_1.088435_g80559_i0forward_frame_3 - 0.074 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Plug domain of Sec61p CLIP_SPH_mas PF18398.1 NODE_88498_length_182_cov_1.088435_g80557_i0forward_frame_2 - 0.047 14.1 5.1 1.7 9.1 1.4 2.3 2 0 0 2 2 2 0 Clip-domain serine protease homolog masquerade SelP_N PF04592.14 NODE_88493_length_182_cov_1.108844_g80552_i0forward_frame_2 - 0.095 12.1 0.3 0.095 12.1 0.3 1.1 1 0 0 1 1 1 0 Selenoprotein P, N terminal region ARL6IP6 PF15062.6 NODE_88491_length_182_cov_1.129252_g80550_i0reverse_frame_3 - 0.067 13.3 1.0 0.063 13.4 1.0 1.3 1 1 0 1 1 1 0 Haemopoietic lineage transmembrane helix FeThRed_B PF02943.15 NODE_88489_length_182_cov_1.136054_g80548_i0reverse_frame_3 - 0.066 13.2 0.3 0.069 13.2 0.3 1.1 1 0 0 1 1 1 0 Ferredoxin thioredoxin reductase catalytic beta chain Tcp11 PF05794.13 NODE_88488_length_182_cov_1.142857_g80547_i0reverse_frame_3 - 0.077 12.1 0.0 0.084 11.9 0.0 1.0 1 0 0 1 1 1 0 T-complex protein 11 TB PF00683.17 NODE_88483_length_182_cov_1.170068_g80542_i0reverse_frame_3 - 0.031 14.0 0.2 0.045 13.5 0.2 1.3 1 0 0 1 1 1 0 TB domain DUF2061 PF09834.9 NODE_88483_length_182_cov_1.170068_g80542_i0reverse_frame_2 - 0.1 13.1 0.0 0.54 10.8 0.0 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2061) DUF3666 PF12408.8 NODE_88479_length_182_cov_1.183673_g80538_i0forward_frame_3 - 0.099 11.9 1.9 0.18 11.0 1.9 1.5 1 0 0 1 1 1 0 Ribose-5-phosphate isomerase CagZ PF09053.10 NODE_88476_length_182_cov_1.190476_g80535_i0reverse_frame_3 - 0.038 13.6 0.2 0.041 13.5 0.2 1.0 1 0 0 1 1 1 0 CagZ MutS_II PF05188.17 NODE_88475_length_182_cov_1.190476_g80534_i0reverse_frame_3 - 0.071 13.4 0.0 0.08 13.2 0.0 1.2 1 0 0 1 1 1 0 MutS domain II PRR20 PF15708.5 NODE_88470_length_182_cov_1.204082_g80529_i0reverse_frame_2 - 1.2 9.0 5.3 1.3 8.9 5.3 1.0 1 0 0 1 1 1 0 Proline-rich protein family 20 Viral_cys_rich PF08008.12 NODE_88467_length_182_cov_1.217687_g80526_i0forward_frame_3 - 0.11 12.5 0.2 0.13 12.3 0.2 1.2 1 0 0 1 1 1 0 Viral cysteine rich HECT PF00632.25 NODE_88464_length_182_cov_1.224490_g80523_i0forward_frame_2 - 6.5e-11 42.3 0.1 6.5e-11 42.3 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Phage_SSB PF16773.5 NODE_88460_length_182_cov_1.238095_g80519_i0forward_frame_3 - 0.024 14.7 0.0 0.027 14.5 0.0 1.0 1 0 0 1 1 1 0 Lactococcus phage single-stranded DNA binding protein SurA_N_2 PF13623.6 NODE_88460_length_182_cov_1.238095_g80519_i0forward_frame_3 - 0.048 13.5 0.2 0.05 13.5 0.2 1.0 1 0 0 1 1 1 0 SurA N-terminal domain Alg6_Alg8 PF03155.15 NODE_88459_length_182_cov_1.238095_g80518_i0reverse_frame_2 - 0.015 14.3 0.7 0.016 14.2 0.7 1.0 1 0 0 1 1 1 0 ALG6, ALG8 glycosyltransferase family Ion_trans PF00520.31 NODE_88457_length_182_cov_1.244898_g80516_i0forward_frame_3 - 0.00078 18.7 1.8 0.00085 18.6 1.8 1.0 1 0 0 1 1 1 1 Ion transport protein DUF1265 PF06887.14 NODE_88456_length_182_cov_1.244898_g80515_i0reverse_frame_3 - 0.019 14.9 0.6 0.026 14.5 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1265) TPP1 PF10341.9 NODE_88447_length_182_cov_1.272109_g80506_i0forward_frame_3 - 0.038 14.0 0.1 0.042 13.8 0.1 1.1 1 0 0 1 1 1 0 Shelterin complex subunit, TPP1/ACD LRR_4 PF12799.7 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.0015 18.9 1.9 0.0037 17.6 1.9 1.7 1 1 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.0018 18.0 0.4 0.17 11.6 0.1 2.2 2 0 0 2 2 2 2 Leucine rich repeat LRR_1 PF00560.33 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.0032 17.8 2.1 0.097 13.3 2.1 2.2 1 1 0 1 1 1 1 Leucine Rich Repeat LRR_6 PF13516.6 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.015 15.3 0.1 0.33 11.1 0.0 2.4 2 0 0 2 2 2 0 Leucine Rich repeat DUF913 PF06025.12 NODE_88444_length_182_cov_1.272109_g80503_i0forward_frame_3 - 0.027 13.4 0.0 0.029 13.4 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) AgrB PF04647.15 NODE_88442_length_182_cov_1.272109_g80501_i0forward_frame_3 - 0.068 12.5 3.5 0.072 12.4 3.5 1.2 1 0 0 1 1 1 0 Accessory gene regulator B PAM2 PF07145.15 NODE_88438_length_182_cov_1.285714_g80497_i0forward_frame_2 - 0.022 14.4 4.5 0.19 11.5 0.7 2.6 2 1 0 2 2 2 0 Ataxin-2 C-terminal region Slu7 PF11708.8 NODE_88432_length_182_cov_1.292517_g80491_i0forward_frame_3 - 0.097 12.4 0.0 0.11 12.2 0.0 1.0 1 0 0 1 1 1 0 Pre-mRNA splicing Prp18-interacting factor RBM1CTR PF08081.11 NODE_88432_length_182_cov_1.292517_g80491_i0forward_frame_2 - 0.31 11.1 8.6 0.52 10.4 8.6 1.5 1 1 0 1 1 1 0 RBM1CTR (NUC064) family HTH_48 PF17906.1 NODE_88429_length_182_cov_1.299320_g80488_i0reverse_frame_3 - 0.13 12.4 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 HTH domain in Mos1 transposase Exop_C PF18559.1 NODE_88429_length_182_cov_1.299320_g80488_i0reverse_frame_3 - 0.14 12.0 0.1 0.16 11.9 0.1 1.1 1 0 0 1 1 1 0 Galactose-binding domain-like PdxA PF04166.12 NODE_88429_length_182_cov_1.299320_g80488_i0forward_frame_3 - 0.22 10.9 0.0 0.22 10.9 0.0 1.0 1 0 0 1 1 1 0 Pyridoxal phosphate biosynthetic protein PdxA 7TM_GPCR_Srt PF10321.9 NODE_88428_length_182_cov_1.299320_g80487_i0reverse_frame_3 - 0.041 12.9 0.7 0.039 12.9 0.7 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srt BH3 PF15285.6 NODE_88428_length_182_cov_1.299320_g80487_i0reverse_frame_3 - 0.044 13.5 1.2 2 8.2 0.1 2.2 2 0 0 2 2 2 0 Beclin-1 BH3 domain, Bcl-2-interacting Dimerisation2 PF16864.5 NODE_88428_length_182_cov_1.299320_g80487_i0forward_frame_2 - 0.044 13.8 1.2 0.72 9.9 0.1 2.0 1 1 1 2 2 2 0 Dimerisation domain Otopetrin PF03189.13 NODE_88423_length_182_cov_1.312925_g80482_i0reverse_frame_3 - 0.019 13.8 0.1 0.019 13.8 0.1 1.0 1 0 0 1 1 1 0 Otopetrin FAM194 PF14977.6 NODE_88422_length_182_cov_1.319728_g80481_i0reverse_frame_3 - 0.059 12.7 0.6 0.059 12.7 0.6 1.0 1 0 0 1 1 1 0 FAM194 protein Sec15 PF04091.12 NODE_88419_length_182_cov_1.333333_g80478_i0forward_frame_2 - 0.15 11.4 0.0 0.15 11.4 0.0 1.0 1 0 0 1 1 1 0 Exocyst complex subunit Sec15-like Peptidase_A24 PF01478.18 NODE_88418_length_182_cov_1.333333_g80477_i0reverse_frame_3 - 0.1 13.0 2.0 0.11 12.9 2.0 1.0 1 0 0 1 1 1 0 Type IV leader peptidase family Mg_chelatase_C PF13335.6 NODE_88418_length_182_cov_1.333333_g80477_i0forward_frame_2 - 1.3e-20 73.8 0.1 1.4e-20 73.7 0.1 1.0 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI C-terminal AAA_lid_2 PF17863.1 NODE_88418_length_182_cov_1.333333_g80477_i0forward_frame_2 - 0.02 14.8 0.0 0.023 14.5 0.0 1.1 1 0 0 1 1 1 0 AAA lid domain RNA_pol_A_CTD PF03118.15 NODE_88418_length_182_cov_1.333333_g80477_i0forward_frame_2 - 0.022 14.5 0.0 0.16 11.7 0.0 1.9 1 1 1 2 2 2 0 Bacterial RNA polymerase, alpha chain C terminal domain AAA_lid_8 PF17868.1 NODE_88418_length_182_cov_1.333333_g80477_i0forward_frame_2 - 0.044 13.7 0.0 0.05 13.5 0.0 1.1 1 0 0 1 1 1 0 AAA lid domain Pept_S41_N PF18294.1 NODE_88417_length_182_cov_1.340136_g80476_i0forward_frame_3 - 0.034 14.2 0.2 0.2 11.7 0.1 1.9 2 0 0 2 2 2 0 Peptidase S41 N-terminal domain Glycoprotein PF03409.15 NODE_88413_length_182_cov_1.346939_g80472_i0reverse_frame_3 - 0.84 8.4 6.0 0.88 8.4 6.0 1.0 1 0 0 1 1 1 0 Transmembrane glycoprotein DUF4834 PF16118.5 NODE_88413_length_182_cov_1.346939_g80472_i0forward_frame_3 - 0.5 11.3 2.5 0.61 11.1 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DUF4191 PF13829.6 NODE_88413_length_182_cov_1.346939_g80472_i0forward_frame_3 - 1.7 7.9 7.3 1.8 7.8 7.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF4838 PF16126.5 NODE_88413_length_182_cov_1.346939_g80472_i0forward_frame_2 - 0.22 10.8 0.2 0.25 10.7 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4838) DUF2053 PF09767.9 NODE_88412_length_182_cov_1.346939_g80471_i0forward_frame_3 - 0.00054 20.2 1.7 0.00068 19.8 1.7 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2053) TPR_1 PF00515.28 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 1.6e-11 43.5 2.6 6.4e-08 32.1 0.1 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 1.2e-07 31.3 0.7 7.2e-05 22.6 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 4.7e-07 29.5 1.0 0.0001 22.3 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 2.5e-06 27.7 0.0 5e-06 26.7 0.0 1.5 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.00067 19.4 0.0 0.0011 18.7 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.017 14.5 0.0 0.03 13.8 0.0 1.3 1 0 0 1 1 1 0 SHNi-TPR TPR_16 PF13432.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.018 15.7 0.0 0.054 14.1 0.0 1.7 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.033 14.2 0.1 0.14 12.2 0.0 2.0 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.085 13.5 0.1 2.2 9.1 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat HTH_Bact PF18768.1 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.1 12.2 0.8 6 6.5 0.3 2.5 2 1 0 2 2 2 0 Helix-turn-helix bacterial domain DUF2738 PF10927.8 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.11 11.6 0.1 0.11 11.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2738) TPR_9 PF13371.6 NODE_88409_length_182_cov_1.353741_g80468_i0forward_frame_2 - 0.12 12.5 0.0 0.27 11.4 0.0 1.5 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF641 PF04859.12 NODE_88406_length_182_cov_1.353741_g80465_i0reverse_frame_2 - 0.031 14.6 0.6 0.043 14.2 0.6 1.2 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) Archease PF01951.16 NODE_88406_length_182_cov_1.353741_g80465_i0reverse_frame_2 - 0.16 12.2 0.1 0.17 12.1 0.1 1.0 1 0 0 1 1 1 0 Archease protein family (MTH1598/TM1083) HNH PF01844.23 NODE_88404_length_182_cov_1.353741_g80463_i0forward_frame_2 - 4.6e-05 23.5 4.4 5.9e-05 23.2 4.4 1.2 1 0 0 1 1 1 1 HNH endonuclease PSCyt2 PF07583.11 NODE_88404_length_182_cov_1.353741_g80463_i0forward_frame_2 - 0.092 12.7 0.3 0.12 12.3 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1549) RVT_2 PF07727.14 NODE_88403_length_182_cov_1.353741_g80462_i0reverse_frame_2 - 0.0001 22.0 0.0 0.0001 22.0 0.0 1.0 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) CRAM_rpt PF07016.11 NODE_88402_length_182_cov_1.353741_g80461_i0forward_frame_3 - 0.023 14.4 0.2 0.037 13.8 0.2 1.3 1 0 0 1 1 1 0 Cysteine-rich acidic integral membrane protein precursor Sugarporin_N PF11471.8 NODE_88400_length_182_cov_1.353741_g80459_i0reverse_frame_3 - 0.036 14.0 2.3 0.058 13.4 2.3 1.4 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension Gly-rich_Ago1 PF12764.7 NODE_88400_length_182_cov_1.353741_g80459_i0reverse_frame_2 - 0.016 15.9 1.7 0.018 15.8 1.7 1.2 1 0 0 1 1 1 0 Glycine-rich region of argonaut Mcm10 PF09332.11 NODE_88400_length_182_cov_1.353741_g80459_i0forward_frame_2 - 2.2 7.6 4.1 2.3 7.5 4.1 1.0 1 0 0 1 1 1 0 Mcm10 replication factor LMF1 PF06762.14 NODE_88399_length_182_cov_1.360544_g80458_i0forward_frame_2 - 6.2e-17 61.8 0.1 6.4e-17 61.8 0.1 1.1 1 0 0 1 1 1 1 Lipase maturation factor DUF5595 PF18077.1 NODE_88395_length_182_cov_1.360544_g80454_i0reverse_frame_3 - 0.63 10.2 2.7 0.68 10.1 1.1 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF5595) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks457.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks457.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks457.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks457.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:36:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3285 PF11688.8 NODE_88395_length_182_cov_1.360544_g80454_i0reverse_frame_2 - 0.062 13.2 0.6 0.086 12.8 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3285) Focadhesin PF11229.8 NODE_88395_length_182_cov_1.360544_g80454_i0forward_frame_3 - 0.082 11.1 0.0 0.083 11.1 0.0 1.0 1 0 0 1 1 1 0 Focadhesin Tax PF02959.16 NODE_88395_length_182_cov_1.360544_g80454_i0forward_frame_3 - 0.17 11.3 0.0 0.19 11.2 0.0 1.0 1 0 0 1 1 1 0 HTLV Tax zf-LITAF-like PF10601.9 NODE_88388_length_182_cov_1.360544_g80447_i0reverse_frame_3 - 1.5e-05 25.2 9.9 1.8e-05 24.9 9.9 1.2 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain FtsX PF02687.21 NODE_88387_length_182_cov_1.360544_g80446_i0forward_frame_2 - 2e-09 37.8 0.7 2e-09 37.8 0.7 1.0 1 0 0 1 1 1 1 FtsX-like permease family DUF3915 PF13054.6 NODE_88386_length_182_cov_1.360544_g80445_i0reverse_frame_3 - 0.081 12.9 3.0 0.093 12.7 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Renin_r PF07850.14 NODE_88385_length_182_cov_1.360544_g80444_i0reverse_frame_3 - 0.21 12.2 2.5 0.23 12.1 2.5 1.1 1 0 0 1 1 1 0 Renin receptor-like protein Pkinase PF00069.25 NODE_88380_length_182_cov_1.367347_g80439_i0reverse_frame_2 - 7.6e-15 55.0 0.0 7.7e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_88380_length_182_cov_1.367347_g80439_i0reverse_frame_2 - 8.7e-06 25.2 0.0 9.2e-06 25.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_88380_length_182_cov_1.367347_g80439_i0reverse_frame_2 - 0.14 11.5 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Kinase-like CBM_19 PF03427.13 NODE_88376_length_182_cov_1.380952_g80435_i0reverse_frame_2 - 0.062 13.3 1.7 0.07 13.1 1.7 1.2 1 0 0 1 1 1 0 Carbohydrate binding domain (family 19) Pkinase PF00069.25 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 4.2e-11 42.7 1.1 4.5e-11 42.6 1.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 7.2e-07 28.7 0.1 7.9e-07 28.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 0.0017 17.7 0.1 0.0017 17.7 0.1 1.0 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 0.005 15.7 0.3 0.0051 15.6 0.3 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 NODE_88373_length_182_cov_1.394558_g80432_i0reverse_frame_3 - 0.047 13.0 0.2 0.048 13.0 0.2 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Trypan_PARP PF05887.11 NODE_88369_length_182_cov_1.414966_g80428_i0reverse_frame_2 - 1.1 9.2 4.0 1.2 9.2 4.0 1.1 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) MRP-S28 PF10213.9 NODE_88368_length_182_cov_1.414966_g80427_i0forward_frame_3 - 0.032 14.6 1.3 0.037 14.4 1.3 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal subunit protein TusA PF01206.17 NODE_88366_length_182_cov_1.428571_g80425_i0reverse_frame_3 - 4 7.3 7.0 17 5.3 0.3 3.1 2 1 1 3 3 3 0 Sulfurtransferase TusA PqqA PF08042.11 NODE_88366_length_182_cov_1.428571_g80425_i0reverse_frame_2 - 0.0022 17.9 1.5 3.3 7.9 0.0 3.2 3 0 0 3 3 3 3 PqqA family Smr PF01713.21 NODE_88366_length_182_cov_1.428571_g80425_i0forward_frame_2 - 0.059 13.7 0.0 0.071 13.5 0.0 1.2 1 0 0 1 1 1 0 Smr domain GED PF02212.18 NODE_88365_length_182_cov_1.428571_g80424_i0forward_frame_2 - 0.0047 17.0 0.7 0.0054 16.9 0.7 1.1 1 0 0 1 1 1 1 Dynamin GTPase effector domain zf_C2H2_ZHX PF18387.1 NODE_88364_length_182_cov_1.428571_g80423_i0forward_frame_3 - 1.2 8.9 5.8 0.14 11.8 1.1 1.7 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain EB PF01683.18 NODE_88363_length_182_cov_1.428571_g80422_i0forward_frame_2 - 3.2e-05 24.1 6.1 3.8e-05 23.9 6.1 1.3 1 0 0 1 1 1 1 EB module Dickkopf_N PF04706.12 NODE_88363_length_182_cov_1.428571_g80422_i0forward_frame_2 - 4.3e-05 23.9 8.2 5.1e-05 23.7 8.2 1.1 1 0 0 1 1 1 1 Dickkopf N-terminal cysteine-rich region Statherin PF03875.13 NODE_88362_length_182_cov_1.435374_g80421_i0forward_frame_2 - 0.81 9.8 7.8 1.2 9.3 7.8 1.3 1 0 0 1 1 1 0 Statherin pKID PF02173.17 NODE_88361_length_182_cov_1.448980_g80420_i0forward_frame_2 - 0.3 10.6 3.2 0.45 10.0 3.2 1.2 1 0 0 1 1 1 0 pKID domain V-ATPase_G_2 PF16999.5 NODE_88358_length_182_cov_1.462585_g80417_i0reverse_frame_2 - 0.0037 17.6 0.3 0.0043 17.4 0.3 1.1 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit Peptidase_M20 PF01546.28 NODE_88356_length_182_cov_1.482993_g80415_i0forward_frame_3 - 0.0058 16.3 0.2 0.0088 15.8 0.2 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 DUF1117 PF06547.12 NODE_88356_length_182_cov_1.482993_g80415_i0forward_frame_3 - 0.095 13.3 0.2 0.12 12.9 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1117) CCER1 PF15482.6 NODE_88356_length_182_cov_1.482993_g80415_i0forward_frame_2 - 0.29 11.0 6.1 0.29 11.0 6.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing glutamate-rich protein family 1 USP7_C2 PF14533.6 NODE_88353_length_182_cov_1.482993_g80412_i0forward_frame_2 - 0.095 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin-specific protease C-terminal SCA7 PF08313.12 NODE_88352_length_182_cov_1.482993_g80411_i0reverse_frame_3 - 0.03 14.2 1.3 0.03 14.2 1.3 1.5 1 1 0 1 1 1 0 SCA7, zinc-binding domain Tuberin PF03542.16 NODE_88347_length_182_cov_1.503401_g80406_i0reverse_frame_3 - 0.057 12.5 0.0 0.057 12.5 0.0 1.1 1 0 0 1 1 1 0 Tuberin DUF591 PF04569.14 NODE_88340_length_182_cov_1.551020_g80399_i0reverse_frame_3 - 0.12 12.4 4.6 0.058 13.4 3.0 1.4 1 1 0 1 1 1 0 Protein of unknown function Hexapep_loop PF18776.1 NODE_88335_length_182_cov_1.557823_g80394_i0reverse_frame_2 - 0.055 13.1 1.2 0.15 11.7 1.2 1.7 1 0 0 1 1 1 0 Hexapeptide repeat including loop zf-CCCH_4 PF18044.1 NODE_88334_length_182_cov_1.564626_g80393_i0forward_frame_2 - 0.072 12.9 7.2 0.13 12.1 0.8 2.5 2 0 0 2 2 2 0 CCCH-type zinc finger DUF4231 PF14015.6 NODE_88333_length_182_cov_1.571429_g80392_i0reverse_frame_2 - 0.9 10.0 6.2 0.96 9.9 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) Tic110 PF16940.5 NODE_88333_length_182_cov_1.571429_g80392_i0forward_frame_3 - 4.1 5.8 11.9 4.2 5.7 11.9 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter DbpA PF03880.15 NODE_88330_length_182_cov_1.578231_g80389_i0reverse_frame_2 - 0.0034 17.4 0.0 0.0058 16.6 0.0 1.4 1 0 0 1 1 1 1 DbpA RNA binding domain Rubrerythrin PF02915.17 NODE_88326_length_182_cov_1.591837_g80385_i0forward_frame_2 - 0.2 12.1 0.0 0.2 12.1 0.0 1.1 1 0 0 1 1 1 0 Rubrerythrin Phage_G PF02306.15 NODE_88324_length_182_cov_1.598639_g80383_i0reverse_frame_3 - 0.067 12.9 0.0 0.068 12.9 0.0 1.0 1 0 0 1 1 1 0 Major spike protein (G protein) BTB PF00651.31 NODE_88323_length_182_cov_1.598639_g80382_i0reverse_frame_2 - 0.026 14.7 0.0 0.03 14.6 0.0 1.1 1 0 0 1 1 1 0 BTB/POZ domain DUF2535 PF10751.9 NODE_88323_length_182_cov_1.598639_g80382_i0forward_frame_3 - 0.14 12.7 0.0 0.15 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2535) DUF1412 PF07203.11 NODE_88321_length_182_cov_1.605442_g80380_i0reverse_frame_3 - 0.95 9.7 2.9 11 6.2 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1412) DUF2283 PF10049.9 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_3 - 0.15 12.3 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2283) Ephrin_rec_like PF07699.13 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 1e-08 34.8 19.2 2.2e-06 27.3 4.8 2.8 1 1 2 3 3 3 3 Putative ephrin-receptor like NCD3G PF07562.14 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 3.2e-06 27.0 11.8 0.006 16.5 2.3 2.1 2 0 0 2 2 2 2 Nine Cysteines Domain of family 3 GPCR Opy2 PF09463.10 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 0.00093 19.5 17.1 0.022 15.1 5.0 2.2 2 0 0 2 2 2 2 Opy2 protein TNFR_c6 PF00020.18 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 0.068 13.6 0.6 0.068 13.6 0.6 3.5 1 1 2 3 3 3 0 TNFR/NGFR cysteine-rich region DUF2039 PF10217.9 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 0.21 12.0 7.0 2 8.8 0.8 2.0 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2039) FhuF_C PF11575.8 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 1.3 9.0 22.9 0.54 10.2 1.6 4.1 4 0 0 4 4 4 0 FhuF 2Fe-2S C-terminal domain Sp38 PF07354.12 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 2.5 7.5 10.1 3.3 7.1 9.3 1.6 1 1 0 1 1 1 0 Zona-pellucida-binding protein (Sp38) TackOD1 PF18551.1 NODE_88321_length_182_cov_1.605442_g80380_i0forward_frame_2 - 6.9 6.3 9.8 1.6 8.4 4.6 1.8 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 ADD_DNMT3 PF17980.1 NODE_88320_length_182_cov_1.612245_g80379_i0forward_frame_2 - 0.0014 18.6 1.2 0.0018 18.2 1.2 1.3 1 0 0 1 1 1 1 Cysteine rich ADD domain in DNMT3 Usg PF06233.12 NODE_88310_length_182_cov_1.619048_g80369_i0forward_frame_3 - 0.031 14.4 0.8 0.041 14.0 0.8 1.4 1 1 0 1 1 1 0 Usg-like family TrfA PF07042.11 NODE_88309_length_182_cov_1.625850_g80368_i0reverse_frame_3 - 0.13 11.3 0.2 0.13 11.2 0.2 1.0 1 0 0 1 1 1 0 TrfA protein Cas_CXXC_CXXC PF09706.10 NODE_88306_length_182_cov_1.632653_g80365_i0forward_frame_3 - 0.033 14.4 0.1 0.04 14.2 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) PHD PF00628.29 NODE_88304_length_182_cov_1.632653_g80363_i0forward_frame_3 - 0.01 15.7 2.1 0.014 15.3 2.1 1.3 1 0 0 1 1 1 0 PHD-finger WGR PF05406.15 NODE_88302_length_182_cov_1.632653_g80361_i0reverse_frame_3 - 1.5e-08 34.6 0.5 1.8e-08 34.3 0.4 1.2 1 1 0 1 1 1 1 WGR domain PP2C_2 PF13672.6 NODE_88300_length_182_cov_1.632653_g80359_i0forward_frame_2 - 0.0021 17.7 0.0 0.0023 17.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C YWFCY PF14293.6 NODE_88292_length_182_cov_1.632653_g80351_i0forward_frame_3 - 0.11 12.8 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 YWFCY protein DUF817 PF05675.12 NODE_88288_length_182_cov_1.632653_g80347_i0forward_frame_3 - 0.017 14.8 0.2 0.02 14.6 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF817) Phage_holin_3_3 PF16083.5 NODE_88287_length_182_cov_1.632653_g80346_i0reverse_frame_2 - 0.075 13.2 0.0 0.085 13.0 0.0 1.0 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III Lact-deh-memb PF09330.11 NODE_88285_length_182_cov_1.632653_g80344_i0reverse_frame_2 - 0.067 12.5 0.0 0.073 12.4 0.0 1.0 1 0 0 1 1 1 0 D-lactate dehydrogenase, membrane binding YjbT PF17089.5 NODE_88279_length_182_cov_1.666667_g80338_i0reverse_frame_3 - 0.085 12.9 0.3 0.093 12.8 0.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family MauE PF07291.11 NODE_88276_length_182_cov_1.680272_g80335_i0reverse_frame_3 - 0.28 11.0 0.6 0.31 10.8 0.6 1.1 1 0 0 1 1 1 0 Methylamine utilisation protein MauE DUF1639 PF07797.14 NODE_88275_length_182_cov_1.687075_g80334_i0reverse_frame_3 - 0.055 13.5 1.0 0.07 13.1 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) FTSW_RODA_SPOVE PF01098.19 NODE_88274_length_182_cov_1.693878_g80333_i0reverse_frame_3 - 0.078 12.0 0.1 0.089 11.8 0.1 1.0 1 0 0 1 1 1 0 Cell cycle protein AA_permease_C PF13906.6 NODE_88274_length_182_cov_1.693878_g80333_i0reverse_frame_3 - 0.14 12.3 0.6 0.25 11.4 0.6 1.4 1 0 0 1 1 1 0 C-terminus of AA_permease CoxIIa PF08113.11 NODE_88274_length_182_cov_1.693878_g80333_i0forward_frame_3 - 0.023 14.5 1.0 0.029 14.2 1.0 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IIa family Stevor PF17410.2 NODE_88272_length_182_cov_1.707483_g80331_i0reverse_frame_3 - 0.69 9.4 7.5 0.72 9.4 7.5 1.0 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Ribo_biogen_C PF04034.13 NODE_88267_length_182_cov_1.734694_g80326_i0forward_frame_3 - 0.063 13.0 0.0 0.069 12.9 0.0 1.0 1 0 0 1 1 1 0 Ribosome biogenesis protein, C-terminal DUF5445 PF17520.2 NODE_88262_length_182_cov_1.782313_g80321_i0forward_frame_2 - 0.023 14.6 0.3 0.032 14.1 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5445) NAS PF03059.16 NODE_88260_length_182_cov_1.795918_g80319_i0reverse_frame_2 - 0.0089 15.4 0.2 0.0094 15.3 0.2 1.0 1 0 0 1 1 1 1 Nicotianamine synthase protein Clenterotox PF03505.14 NODE_88259_length_182_cov_1.802721_g80318_i0forward_frame_3 - 0.2 11.2 0.0 0.2 11.2 0.0 1.0 1 0 0 1 1 1 0 Clostridium enterotoxin DUF2207 PF09972.9 NODE_88245_length_182_cov_1.897959_g80304_i0reverse_frame_2 - 2.2 6.9 4.2 2.3 6.9 4.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3043 PF11241.8 NODE_88245_length_182_cov_1.897959_g80304_i0reverse_frame_2 - 2.4 8.2 3.6 2.6 8.1 3.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) Ac81 PF05820.11 NODE_88245_length_182_cov_1.897959_g80304_i0reverse_frame_2 - 3.4 7.2 10.0 3.7 7.1 10.0 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 DUF1874 PF08960.10 NODE_88245_length_182_cov_1.897959_g80304_i0forward_frame_3 - 0.039 14.1 0.2 0.044 13.9 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1874) CBM_14 PF01607.24 NODE_88244_length_182_cov_1.904762_g80303_i0forward_frame_2 - 0.032 14.4 0.5 0.052 13.7 0.3 1.5 2 0 0 2 2 2 0 Chitin binding Peritrophin-A domain Dus PF01207.17 NODE_88244_length_182_cov_1.904762_g80303_i0forward_frame_2 - 0.15 11.1 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 Dihydrouridine synthase (Dus) PET122 PF05476.11 NODE_88240_length_182_cov_1.904762_g80299_i0reverse_frame_2 - 0.036 13.4 0.2 0.036 13.4 0.2 1.0 1 0 0 1 1 1 0 PET122 Succ_DH_flav_C PF02910.20 NODE_88237_length_182_cov_1.911565_g80296_i0reverse_frame_3 - 0.0096 15.9 0.2 0.011 15.8 0.2 1.0 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term TPMT PF05724.11 NODE_88237_length_182_cov_1.911565_g80296_i0reverse_frame_3 - 0.029 14.0 0.1 0.029 14.0 0.1 1.1 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DUF5113 PF17140.4 NODE_88237_length_182_cov_1.911565_g80296_i0reverse_frame_3 - 0.12 12.2 1.0 0.19 11.5 1.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5113) Peptidase_M17 PF00883.21 NODE_88233_length_182_cov_1.945578_g80292_i0reverse_frame_3 - 1.2e-24 87.1 0.1 1.3e-24 87.1 0.1 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain DUF3586 PF12131.8 NODE_88230_length_182_cov_1.965986_g80289_i0reverse_frame_3 - 0.056 13.7 0.3 0.063 13.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3586) DUF4257 PF14074.6 NODE_88228_length_182_cov_1.979592_g80287_i0reverse_frame_2 - 0.07 13.3 0.0 0.082 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4257) PDCD2_C PF04194.13 NODE_88224_length_182_cov_2.027211_g80283_i0reverse_frame_2 - 0.068 13.2 0.8 0.072 13.2 0.8 1.0 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain Prot_ATP_OB_N PF17758.1 NODE_88221_length_182_cov_2.047619_g80280_i0reverse_frame_3 - 0.96 9.1 2.7 21 4.9 0.1 2.7 3 0 0 3 3 3 0 Proteasomal ATPase OB N-terminal domain DUF1856 PF08983.10 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_3 - 0.52 10.6 3.9 0.88 9.8 0.5 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF1856) Baculo_IE-1 PF05290.11 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_3 - 1.4 8.8 7.1 2 8.3 7.1 1.3 1 1 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) FNIP PF05725.12 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_2 - 3.8e-12 46.2 2.5 5.7e-06 26.4 0.3 2.0 2 0 0 2 2 2 2 FNIP Repeat LRR_11 PF18831.1 NODE_88221_length_182_cov_2.047619_g80280_i0forward_frame_2 - 0.2 11.2 7.6 1.2 8.7 0.5 2.9 3 0 0 3 3 3 0 Leucine-rich repeat eIF3g PF12353.8 NODE_88220_length_182_cov_2.061224_g80279_i0forward_frame_3 - 0.005 17.2 0.1 0.0057 17.0 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit G hNIFK_binding PF12196.8 NODE_88218_length_182_cov_2.081633_g80277_i0reverse_frame_3 - 0.034 13.6 0.0 0.047 13.2 0.0 1.3 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK DUF1372 PF07116.11 NODE_88215_length_182_cov_2.115646_g80274_i0forward_frame_3 - 0.12 12.5 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1372) PAF-AH_p_II PF03403.13 NODE_88212_length_182_cov_2.136054_g80271_i0forward_frame_3 - 0.025 13.1 0.2 0.026 13.1 0.2 1.0 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II Methyltransf_FA PF12248.8 NODE_88208_length_182_cov_2.142857_g80267_i0reverse_frame_2 - 0.025 14.9 0.0 0.029 14.7 0.0 1.1 1 0 0 1 1 1 0 Farnesoic acid 0-methyl transferase Stealth_CR4 PF17103.5 NODE_88206_length_182_cov_2.170068_g80265_i0reverse_frame_3 - 0.059 13.3 0.0 0.08 12.8 0.0 1.2 1 0 0 1 1 1 0 Stealth protein CR4, conserved region 4 eIF3_subunit PF08597.10 NODE_88205_length_182_cov_2.170068_g80264_i0forward_frame_2 - 2.1 8.2 9.2 2.2 8.1 9.2 1.0 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit MatE PF01554.18 NODE_88203_length_182_cov_2.176871_g80262_i0reverse_frame_3 - 4.5e-05 23.2 1.1 5.9e-05 22.8 1.1 1.2 1 0 0 1 1 1 1 MatE Asp PF00026.23 NODE_88200_length_182_cov_2.176871_g80259_i0reverse_frame_2 - 0.00024 20.7 0.0 0.00025 20.6 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 NODE_88200_length_182_cov_2.176871_g80259_i0reverse_frame_2 - 0.0077 16.0 0.1 0.0078 16.0 0.1 1.0 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal zf-RING_5 PF14634.6 NODE_88200_length_182_cov_2.176871_g80259_i0forward_frame_2 - 0.18 11.8 4.2 0.29 11.1 4.2 1.5 1 1 0 1 1 1 0 zinc-RING finger domain Msap1 PF17077.5 NODE_88199_length_182_cov_2.176871_g80258_i0reverse_frame_3 - 0.06 12.5 0.0 0.06 12.5 0.0 1.0 1 0 0 1 1 1 0 Mitotic spindle associated protein SHE1 OCRE PF17780.1 NODE_88199_length_182_cov_2.176871_g80258_i0reverse_frame_2 - 0.098 12.7 3.0 4.4 7.4 0.0 2.1 2 0 0 2 2 2 0 OCRE domain Jacalin PF01419.17 NODE_88196_length_182_cov_2.258503_g80255_i0reverse_frame_2 - 3.6e-05 23.7 0.3 3.8e-05 23.6 0.3 1.0 1 0 0 1 1 1 1 Jacalin-like lectin domain Trefoil PF00088.18 NODE_88194_length_182_cov_2.272109_g80253_i0reverse_frame_2 - 0.027 14.3 4.1 0.039 13.8 4.1 1.3 1 0 0 1 1 1 0 Trefoil (P-type) domain DUF4913 PF16259.5 NODE_88193_length_182_cov_2.278912_g80252_i0reverse_frame_2 - 0.047 13.8 0.2 0.05 13.7 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4913) DHHC PF01529.20 NODE_88192_length_182_cov_2.285714_g80251_i0forward_frame_3 - 0.00012 22.1 0.0 0.00012 22.1 0.0 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase LRRNT PF01462.18 NODE_88192_length_182_cov_2.285714_g80251_i0forward_frame_2 - 0.37 10.5 4.4 0.61 9.8 4.4 1.4 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain DUF2752 PF10825.8 NODE_88191_length_182_cov_2.285714_g80250_i0reverse_frame_3 - 0.062 13.4 0.1 4.4 7.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) MBOAT_2 PF13813.6 NODE_88191_length_182_cov_2.285714_g80250_i0forward_frame_2 - 0.016 15.5 0.0 0.018 15.3 0.0 1.0 1 0 0 1 1 1 0 Membrane bound O-acyl transferase family AXE1 PF05448.12 NODE_88190_length_182_cov_2.306122_g80249_i0forward_frame_2 - 0.081 11.6 0.0 0.094 11.4 0.0 1.1 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) DUF962 PF06127.11 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.14 12.3 1.9 0.15 12.1 1.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF962) DUF454 PF04304.13 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.44 10.6 11.9 0.51 10.4 11.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF454) DUF1676 PF07898.13 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.51 10.3 13.1 0.63 10.1 13.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) DUF2244 PF10003.9 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.55 9.9 4.8 0.62 9.7 4.8 1.1 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) DUF2207 PF09972.9 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 0.9 8.2 1.8 0.94 8.2 1.8 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) HlyD_2 PF12700.7 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_3 - 6.3 5.4 5.2 6.8 5.3 5.2 1.0 1 0 0 1 1 1 0 HlyD family secretion protein Orf78 PF06024.12 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_2 - 0.12 12.6 0.0 0.14 12.5 0.0 1.0 1 0 0 1 1 1 0 Orf78 (ac78) Cwf_Cwc_15 PF04889.12 NODE_88188_length_182_cov_2.374150_g80247_i0reverse_frame_2 - 9.7 5.8 17.5 10 5.7 17.5 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein NST1 PF13945.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_3 - 2 8.5 11.6 1.9 8.5 11.6 1.0 1 0 0 1 1 1 0 Salt tolerance down-regulator Tetraspanin PF00335.20 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.0021 17.8 0.7 0.0023 17.7 0.7 1.0 1 0 0 1 1 1 1 Tetraspanin family DUF417 PF04224.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.0029 17.2 1.4 0.0029 17.2 1.4 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF417 Shisa PF13908.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.0035 17.6 2.6 0.0038 17.5 2.6 1.0 1 0 0 1 1 1 1 Wnt and FGF inhibitory regulator DUF2207 PF09972.9 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.0048 15.7 1.7 0.0051 15.6 1.7 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) LRRC37AB_C PF14914.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.043 13.7 6.0 0.046 13.6 6.0 1.1 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain SARAF PF06682.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.062 12.9 0.5 0.067 12.8 0.5 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis DUF4366 PF14283.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.075 13.1 0.7 0.091 12.8 0.7 1.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4366) Marek_A PF02124.15 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.085 12.7 2.2 0.095 12.5 2.2 1.1 1 0 0 1 1 1 0 Marek's disease glycoprotein A CrgA PF06781.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.096 12.8 1.7 0.12 12.4 1.7 1.3 1 1 0 1 1 1 0 Cell division protein CrgA LAP1C PF05609.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.12 11.5 2.1 0.12 11.4 2.1 1.0 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) DUF4220 PF13968.6 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.21 11.0 2.1 0.22 10.9 2.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) Ac81 PF05820.11 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.21 11.1 8.9 0.23 11.0 8.9 1.1 1 0 0 1 1 1 0 Baculoviridae AC81 MMPL PF03176.15 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.34 9.8 7.1 0.35 9.7 7.1 1.1 1 0 0 1 1 1 0 MMPL family RIFIN PF02009.16 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.41 10.5 9.7 0.45 10.4 9.7 1.0 1 0 0 1 1 1 0 Rifin DUF3671 PF12420.8 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.54 10.4 9.7 0.16 12.0 7.1 1.5 1 1 0 1 1 1 0 Protein of unknown function GWT1 PF06423.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 0.57 10.3 4.4 0.73 9.9 4.4 1.3 1 1 0 1 1 1 0 GWT1 EMP24_GP25L PF01105.24 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 1.2 9.0 6.5 1.4 8.8 6.5 1.1 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Orf78 PF06024.12 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 3.6 7.9 14.9 11 6.4 14.9 1.7 1 1 0 1 1 1 0 Orf78 (ac78) T2SSF PF00482.23 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 5.1 7.1 11.6 29 4.6 11.6 1.9 1 1 0 1 1 1 0 Type II secretion system (T2SS), protein F Synaptobrevin PF00957.21 NODE_88188_length_182_cov_2.374150_g80247_i0forward_frame_2 - 9.3 6.1 14.1 0.52 10.1 8.5 1.7 1 1 1 2 2 2 0 Synaptobrevin RIO1 PF01163.22 NODE_88184_length_182_cov_2.442177_g80243_i0reverse_frame_3 - 0.041 13.5 0.1 0.044 13.4 0.1 1.1 1 0 0 1 1 1 0 RIO1 family HECT PF00632.25 NODE_88183_length_182_cov_2.442177_g80242_i0forward_frame_3 - 9.3e-05 22.0 0.3 9.5e-05 22.0 0.3 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) DNA_pol_B_2 PF03175.13 NODE_88182_length_182_cov_2.442177_g80241_i0reverse_frame_2 - 7.3e-06 25.1 0.0 7.6e-06 25.1 0.0 1.0 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral SNARE_assoc PF09335.11 NODE_88177_length_182_cov_2.448980_g80236_i0reverse_frame_2 - 0.0013 19.2 2.6 0.0014 19.1 2.6 1.1 1 0 0 1 1 1 1 SNARE associated Golgi protein SfLAP PF11139.8 NODE_88177_length_182_cov_2.448980_g80236_i0reverse_frame_2 - 0.24 10.8 3.6 0.25 10.7 3.6 1.0 1 0 0 1 1 1 0 Sap, sulfolipid-1-addressing protein HEAT_2 PF13646.6 NODE_88173_length_182_cov_2.482993_g80232_i0reverse_frame_2 - 0.06 13.7 0.0 0.072 13.5 0.0 1.1 1 0 0 1 1 1 0 HEAT repeats Adeno_GP19K PF04881.13 NODE_88170_length_182_cov_2.503401_g80229_i0reverse_frame_3 - 0.024 14.6 0.2 0.028 14.4 0.2 1.1 1 0 0 1 1 1 0 Adenovirus GP19K Baculo_IE-1 PF05290.11 NODE_88167_length_182_cov_2.517007_g80226_i0reverse_frame_3 - 0.031 14.2 0.1 0.033 14.1 0.1 1.0 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) ComZ PF10815.8 NODE_88164_length_182_cov_2.591837_g80223_i0reverse_frame_3 - 0.066 13.2 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 ComZ Adipogenin PF15202.6 NODE_88163_length_182_cov_2.605442_g80222_i0reverse_frame_3 - 0.17 11.9 5.8 0.23 11.5 5.8 1.1 1 0 0 1 1 1 0 Adipogenin Glyco_transf_10 PF00852.19 NODE_88163_length_182_cov_2.605442_g80222_i0forward_frame_2 - 0.01 15.6 0.5 0.01 15.5 0.5 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 10 (fucosyltransferase) C-term DUF4756 PF15948.5 NODE_88163_length_182_cov_2.605442_g80222_i0forward_frame_2 - 0.058 13.3 1.1 0.064 13.1 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4756) Herpeto_peptide PF14409.6 NODE_88162_length_182_cov_2.612245_g80221_i0reverse_frame_3 - 0.072 13.3 0.0 0.085 13.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomally synthesized peptide in Herpetosiphon DUF4536 PF15055.6 NODE_88162_length_182_cov_2.612245_g80221_i0forward_frame_2 - 0.11 12.8 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4536) Alpha_E1_glycop PF01589.16 NODE_88159_length_182_cov_2.693878_g80218_i0forward_frame_3 - 1.1 7.8 6.0 1.2 7.7 6.0 1.1 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein KRE1 PF17056.5 NODE_88158_length_182_cov_2.700680_g80217_i0reverse_frame_2 - 0.18 11.6 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 Killer toxin-resistance protein 1 Toxin_25 PF08095.11 NODE_88158_length_182_cov_2.700680_g80217_i0forward_frame_2 - 0.026 14.5 0.3 0.04 13.9 0.3 1.3 1 0 0 1 1 1 0 Hefutoxin family FB_lectin PF07367.11 NODE_88158_length_182_cov_2.700680_g80217_i0forward_frame_2 - 0.08 12.9 0.0 0.093 12.7 0.0 1.1 1 0 0 1 1 1 0 Fungal fruit body lectin Ribosomal_S17e PF00833.18 NODE_88156_length_182_cov_2.721088_g80215_i0reverse_frame_3 - 0.049 13.6 0.5 0.059 13.3 0.5 1.0 1 0 0 1 1 1 0 Ribosomal S17 DUF1980 PF09323.10 NODE_88149_length_182_cov_2.870748_g80208_i0forward_frame_2 - 0.28 11.1 6.1 0.31 10.9 6.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) Cytochrom_B558a PF05038.13 NODE_88147_length_182_cov_2.870748_g80206_i0reverse_frame_2 - 0.28 10.7 2.6 0.29 10.7 2.6 1.1 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit WW PF00397.26 NODE_88146_length_182_cov_2.870748_g80205_i0forward_frame_2 - 4.1e-11 42.8 1.5 5.2e-11 42.4 1.5 1.2 1 0 0 1 1 1 1 WW domain Bact_transglu_N PF08379.10 NODE_88144_length_182_cov_3.020408_g80203_i0forward_frame_3 - 0.028 15.3 0.2 0.041 14.8 0.2 1.2 1 0 0 1 1 1 0 Bacterial transglutaminase-like N-terminal region Not1 PF04054.15 NODE_88143_length_182_cov_3.027211_g80202_i0reverse_frame_3 - 0.018 14.0 0.8 0.019 13.9 0.8 1.0 1 0 0 1 1 1 0 CCR4-Not complex component, Not1 LRR19-TM PF15176.6 NODE_88141_length_182_cov_3.054422_g80200_i0reverse_frame_2 - 0.12 12.4 1.5 0.14 12.2 1.5 1.1 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain DUF2757 PF10955.8 NODE_88140_length_182_cov_3.204082_g80199_i0reverse_frame_3 - 0.019 15.2 0.0 0.023 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2757) tRNA_bind_3 PF17176.4 NODE_88138_length_182_cov_3.346939_g80197_i0forward_frame_3 - 0.12 12.7 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 tRNA-binding domain zf-ribbon_3 PF13248.6 NODE_88133_length_182_cov_3.925170_g80192_i0reverse_frame_3 - 0.077 12.4 0.3 0.12 11.8 0.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain MSA-2c PF12238.8 NODE_88129_length_182_cov_4.442177_g80188_i0reverse_frame_3 - 0.19 11.7 4.8 0.21 11.6 4.8 1.0 1 0 0 1 1 1 0 Merozoite surface antigen 2c zf-C2H2_aberr PF17017.5 NODE_88126_length_182_cov_4.748299_g80185_i0reverse_frame_3 - 0.001 19.2 0.7 0.0011 19.2 0.7 1.1 1 0 0 1 1 1 1 Aberrant zinc-finger zf-C2H2 PF00096.26 NODE_88126_length_182_cov_4.748299_g80185_i0reverse_frame_3 - 0.0016 18.8 0.4 0.0016 18.8 0.4 2.0 3 0 0 3 3 3 1 Zinc finger, C2H2 type FOXP-CC PF16159.5 NODE_88126_length_182_cov_4.748299_g80185_i0reverse_frame_3 - 0.027 15.1 0.4 0.031 14.9 0.4 1.1 1 0 0 1 1 1 0 FOXP coiled-coil domain zf-H2C2_2 PF13465.6 NODE_88126_length_182_cov_4.748299_g80185_i0reverse_frame_3 - 3.4 8.3 9.2 1.6 9.3 0.6 2.4 2 1 0 2 2 2 0 Zinc-finger double domain DUF1125 PF06563.11 NODE_88125_length_182_cov_5.183673_g80184_i0reverse_frame_3 - 0.032 14.1 0.5 0.045 13.7 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1125) CBM_1 PF00734.18 NODE_88124_length_182_cov_6.925170_g80183_i0reverse_frame_2 - 7.5 6.6 6.7 1.5 8.9 2.3 1.9 2 0 0 2 2 2 0 Fungal cellulose binding domain DUF1231 PF06802.11 NODE_88123_length_182_cov_7.843537_g80182_i0reverse_frame_3 - 0.0054 15.9 0.6 0.0056 15.8 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1231) SpvD PF05563.12 NODE_88123_length_182_cov_7.843537_g80182_i0reverse_frame_2 - 0.12 12.0 2.3 0.14 11.8 2.3 1.0 1 0 0 1 1 1 0 Salmonella plasmid virulence protein SpvD DHC_N1 PF08385.12 NODE_88120_length_182_cov_9.755102_g80179_i0reverse_frame_3 - 0.00016 20.5 0.7 0.00016 20.5 0.0 1.4 2 0 0 2 2 2 1 Dynein heavy chain, N-terminal region 1 Glyco_transf_17 PF04724.13 NODE_88120_length_182_cov_9.755102_g80179_i0reverse_frame_3 - 0.007 15.5 0.2 0.0075 15.3 0.2 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 17 Ada_Zn_binding PF02805.16 NODE_88117_length_182_cov_14.170068_g80176_i0reverse_frame_3 - 0.041 13.9 2.7 0.046 13.8 2.7 1.3 1 1 0 1 1 1 0 Metal binding domain of Ada Protocadherin PF08374.11 NODE_88113_length_182_cov_20.272109_g80172_i0reverse_frame_2 - 3 7.7 9.8 3.6 7.5 9.8 1.1 1 0 0 1 1 1 0 Protocadherin SOCS_box PF07525.16 NODE_88112_length_182_cov_20.659864_g80171_i0reverse_frame_2 - 3.2 8.2 6.4 20 5.7 0.8 2.4 2 0 0 2 2 2 0 SOCS box PyocinActivator PF11112.8 NODE_88102_length_182_cov_28.231293_g80161_i0forward_frame_3 - 0.019 15.1 0.0 0.021 15.0 0.0 1.1 1 0 0 1 1 1 0 Pyocin activator protein PrtN Chordopox_A30L PF06015.12 NODE_88100_length_182_cov_28.931973_g80159_i0reverse_frame_3 - 0.23 11.3 3.2 0.26 11.1 3.2 1.3 1 0 0 1 1 1 0 Chordopoxvirus A30L protein WD40_alt PF14077.6 NODE_88098_length_182_cov_29.673469_g80157_i0reverse_frame_3 - 0.033 14.0 3.9 0.072 13.0 1.7 1.9 2 0 0 2 2 2 0 Alternative WD40 repeat motif Sec62 PF03839.16 NODE_88096_length_182_cov_31.000000_g80155_i0forward_frame_3 - 1 8.8 4.0 1.1 8.7 4.0 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 ESF1 PF18209.1 NODE_88095_length_182_cov_31.190476_g80154_i0forward_frame_3 - 1.1 9.2 9.4 1.8 8.5 0.8 2.7 2 1 0 2 2 2 0 Embryo surrounding factor 1 DUF916 PF06030.12 NODE_88095_length_182_cov_31.190476_g80154_i0forward_frame_2 - 0.064 13.3 0.5 0.081 13.0 0.5 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF916) NDUF_B7 PF05676.13 NODE_88091_length_182_cov_32.959184_g80150_i0reverse_frame_2 - 0.017 14.8 0.3 0.023 14.4 0.3 1.2 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) C_tripleX PF02363.19 NODE_88088_length_182_cov_33.537415_g80147_i0forward_frame_3 - 6.2 7.3 11.8 11 6.6 4.2 2.4 2 1 0 2 2 2 0 Cysteine rich repeat SeqA PF03925.13 NODE_88079_length_182_cov_37.340136_g80138_i0forward_frame_3 - 0.11 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 SeqA protein C-terminal domain S_locus_glycop PF00954.20 NODE_88079_length_182_cov_37.340136_g80138_i0forward_frame_2 - 0.0072 16.8 0.2 0.0072 16.8 0.2 1.1 1 0 0 1 1 1 1 S-locus glycoprotein domain SAND PF01342.21 NODE_88076_length_182_cov_38.993197_g80135_i0reverse_frame_2 - 0.33 10.7 6.9 0.67 9.7 0.4 2.0 1 1 1 2 2 2 0 SAND domain Arg_decarbox_C PF17944.1 NODE_88075_length_182_cov_39.455782_g80134_i0reverse_frame_3 - 0.0063 17.1 0.5 0.0096 16.5 0.5 1.3 1 0 0 1 1 1 1 Arginine decarboxylase C-terminal helical extension GFD1 PF17331.2 NODE_88075_length_182_cov_39.455782_g80134_i0reverse_frame_3 - 0.12 12.6 4.5 0.16 12.2 1.4 2.3 2 0 0 2 2 2 0 GFD1 mRNA transport factor Trehalase_Ca-bi PF07492.11 NODE_88075_length_182_cov_39.455782_g80134_i0reverse_frame_3 - 0.39 10.5 3.7 0.94 9.3 0.5 2.4 2 0 0 2 2 2 0 Neutral trehalase Ca2+ binding domain Histone_H2A_C PF16211.5 NODE_88074_length_182_cov_39.496599_g80133_i0forward_frame_3 - 0.034 13.9 1.5 0.059 13.1 0.0 1.8 2 0 0 2 2 2 0 C-terminus of histone H2A Fig1 PF12351.8 NODE_88072_length_182_cov_40.380952_g80131_i0reverse_frame_2 - 0.022 14.7 1.4 0.023 14.6 1.4 1.0 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 DUF2251 PF10008.9 NODE_88070_length_182_cov_44.061224_g80129_i0reverse_frame_2 - 0.1 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2251) C2-set_2 PF08205.12 NODE_88068_length_182_cov_45.034014_g80127_i0forward_frame_2 - 0.029 14.4 0.1 0.039 14.0 0.1 1.2 1 0 0 1 1 1 0 CD80-like C2-set immunoglobulin domain DUF4197 PF13852.6 NODE_88064_length_182_cov_48.034014_g80123_i0reverse_frame_3 - 0.04 13.6 0.0 0.047 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4197) FaeA PF04703.12 NODE_88062_length_182_cov_48.734694_g80121_i0reverse_frame_2 - 0.039 14.3 0.1 0.049 14.0 0.1 1.4 1 0 0 1 1 1 0 FaeA-like protein DUF1691 PF07950.11 NODE_88059_length_182_cov_51.870748_g80118_i0forward_frame_3 - 0.15 12.8 0.0 0.17 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1691) PUD PF03714.14 NODE_88054_length_182_cov_59.312925_g80113_i0reverse_frame_3 - 0.08 13.8 0.0 0.091 13.6 0.0 1.1 1 0 0 1 1 1 0 Bacterial pullanase-associated domain DUF1672 PF07901.11 NODE_88049_length_182_cov_67.312925_g80108_i0reverse_frame_2 - 0.022 14.1 3.9 0.025 13.9 3.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1672) Psu PF07455.11 NODE_88045_length_182_cov_78.938776_g80104_i0forward_frame_3 - 0.13 11.9 0.0 0.13 11.8 0.0 1.0 1 0 0 1 1 1 0 Phage polarity suppression protein (Psu) Alpha_E1_glycop PF01589.16 NODE_88043_length_182_cov_84.367347_g80102_i0forward_frame_2 - 0.18 10.4 1.3 0.18 10.4 1.3 1.0 1 0 0 1 1 1 0 Alphavirus E1 glycoprotein MNNL PF07657.13 NODE_88031_length_182_cov_144.040816_g80090_i0reverse_frame_3 - 0.26 11.3 9.1 0.31 11.1 9.1 1.1 1 0 0 1 1 1 0 N terminus of Notch ligand LPD24 PF18839.1 NODE_88031_length_182_cov_144.040816_g80090_i0forward_frame_2 - 0.22 11.8 0.5 0.33 11.2 0.5 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 24 Methyltransf_20 PF12147.8 NODE_88029_length_182_cov_152.877551_g80088_i0forward_frame_2 - 0.2 10.8 0.0 0.21 10.7 0.0 1.0 1 0 0 1 1 1 0 Putative methyltransferase Prolamin_like PF05617.11 NODE_88025_length_182_cov_217.530612_g80084_i0forward_frame_2 - 0.039 14.1 0.0 0.041 14.1 0.0 1.1 1 0 0 1 1 1 0 Prolamin-like PHD_2 PF13831.6 NODE_88022_length_182_cov_370.374150_g80081_i0reverse_frame_3 - 0.014 15.0 0.7 0.026 14.1 0.7 1.5 1 0 0 1 1 1 0 PHD-finger UNC119_bdg PF15435.6 NODE_88019_length_182_cov_537.625850_g80078_i0forward_frame_2 - 0.08 12.5 0.1 0.085 12.4 0.1 1.0 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue DUF5542 PF17696.1 NODE_88016_length_182_cov_857.435374_g80075_i0forward_frame_3 - 0.18 12.0 0.7 0.21 11.7 0.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5542) VirArc_Nuclease PF12187.8 NODE_88013_length_182_cov_104934.102041_g80072_i0reverse_frame_2 - 0.084 12.4 1.2 0.087 12.4 1.2 1.0 1 0 0 1 1 1 0 Viral/Archaeal nuclease Phage_integrase PF00589.22 NODE_88013_length_182_cov_104934.102041_g80072_i0reverse_frame_2 - 0.11 12.3 2.9 0.12 12.2 2.9 1.0 1 0 0 1 1 1 0 Phage integrase family YafO_toxin PF13957.6 NODE_88012_length_182_cov_226183.156463_g80071_i0forward_frame_2 - 0.018 15.1 0.0 0.02 14.9 0.0 1.0 1 0 0 1 1 1 0 Toxin YafO, type II toxin-antitoxin system EF-hand_9 PF14658.6 NODE_88008_length_183_cov_0.810811_g80067_i0reverse_frame_2 - 0.029 14.7 0.0 0.036 14.4 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain PIP49_C PF12260.8 NODE_88007_length_183_cov_0.810811_g80066_i0forward_frame_3 - 0.14 11.8 3.7 0.16 11.6 3.7 1.1 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 zf_Rg PF17915.1 NODE_88005_length_183_cov_0.810811_g80064_i0forward_frame_3 - 0.026 13.9 0.1 0.035 13.5 0.1 1.3 1 0 0 1 1 1 0 Reverse gyrase zinc finger E6 PF00518.17 NODE_88004_length_183_cov_0.810811_g80063_i0forward_frame_3 - 0.052 14.0 0.1 0.062 13.7 0.1 1.0 1 0 0 1 1 1 0 Early Protein (E6) PBP1_TM PF14812.6 NODE_88002_length_183_cov_0.810811_g80061_i0reverse_frame_3 - 0.0025 18.1 3.2 0.0028 18.0 3.2 1.1 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal COX7a PF02238.15 NODE_88002_length_183_cov_0.810811_g80061_i0reverse_frame_3 - 0.91 10.0 2.5 1.2 9.6 2.5 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VII RPN5_C PF18098.1 NODE_88002_length_183_cov_0.810811_g80061_i0forward_frame_3 - 0.024 14.7 3.6 0.031 14.4 3.6 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN5 C-terminal domain EPV_E5 PF08135.11 NODE_88002_length_183_cov_0.810811_g80061_i0forward_frame_2 - 0.044 14.2 1.0 0.044 14.2 1.0 1.8 2 0 0 2 2 2 0 Major transforming protein E5 family Zf_RING PF16744.5 NODE_88000_length_183_cov_0.810811_g80059_i0reverse_frame_3 - 0.83 9.8 8.0 0.12 12.5 4.0 1.6 1 1 1 2 2 2 0 KIAA1045 RING finger DUF2613 PF11021.8 NODE_87997_length_183_cov_0.858108_g80056_i0reverse_frame_2 - 0.032 14.3 0.6 0.037 14.1 0.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2613) Mating_N PF12731.7 NODE_87994_length_183_cov_0.871622_g80053_i0reverse_frame_2 - 0.074 13.1 0.1 0.082 13.0 0.1 1.1 1 0 0 1 1 1 0 Mating-type protein beta 1 LexA_DNA_bind PF01726.16 NODE_87991_length_183_cov_0.885135_g80050_i0reverse_frame_3 - 0.12 12.2 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 LexA DNA binding domain Tegument_dsDNA PF12818.7 NODE_87988_length_183_cov_0.912162_g80047_i0reverse_frame_3 - 0.049 12.8 0.0 0.053 12.7 0.0 1.0 1 0 0 1 1 1 0 dsDNA viral tegument protein Antimicrobial_2 PF08023.12 NODE_87986_length_183_cov_0.932432_g80045_i0reverse_frame_2 - 0.06 13.9 2.0 8 7.1 0.0 2.3 2 0 0 2 2 2 0 Frog antimicrobial peptide Peptidase_S10 PF00450.22 NODE_87986_length_183_cov_0.932432_g80045_i0forward_frame_2 - 0.0013 18.3 0.1 0.0015 18.0 0.1 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks458.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks458.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks458.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks458.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:50:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5560 PF17715.1 NODE_87983_length_183_cov_0.959459_g80042_i0reverse_frame_2 - 0.25 10.8 3.7 0.26 10.7 3.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) Ig_6 PF18452.1 NODE_87981_length_183_cov_0.966216_g80040_i0forward_frame_3 - 0.058 13.0 0.1 0.058 13.0 0.1 1.6 2 0 0 2 2 2 0 Immunoglobulin domain Tugs PF17840.1 NODE_87979_length_183_cov_0.979730_g80038_i0reverse_frame_2 - 0.14 12.4 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Tethering Ubl4a to BAGS domain TNV_CP PF03898.13 NODE_87979_length_183_cov_0.979730_g80038_i0forward_frame_2 - 0.025 13.9 0.0 0.028 13.7 0.0 1.0 1 0 0 1 1 1 0 Satellite tobacco necrosis virus coat protein DUF2752 PF10825.8 NODE_87973_length_183_cov_1.006757_g80032_i0reverse_frame_3 - 0.027 14.5 1.5 0.038 14.1 1.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2752) PLAC PF08686.11 NODE_87970_length_183_cov_1.033784_g80029_i0forward_frame_2 - 3.8 8.4 12.0 0.34 11.7 7.0 1.9 2 0 0 2 2 2 0 PLAC (protease and lacunin) domain SH3_11 PF18103.1 NODE_87969_length_183_cov_1.033784_g80028_i0reverse_frame_3 - 0.053 13.7 0.3 0.062 13.5 0.3 1.1 1 0 0 1 1 1 0 Retroviral integrase C-terminal SH3 domain Tic110 PF16940.5 NODE_87968_length_183_cov_1.040541_g80027_i0forward_frame_3 - 0.94 7.9 2.1 0.92 7.9 2.1 1.0 1 0 0 1 1 1 0 Chloroplast envelope transporter DUF1918 PF08940.11 NODE_87964_length_183_cov_1.047297_g80023_i0forward_frame_2 - 0.11 12.2 0.1 12 5.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1918) Usg PF06233.12 NODE_87962_length_183_cov_1.054054_g80021_i0forward_frame_2 - 0.099 12.8 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Usg-like family FAM212 PF15342.6 NODE_87958_length_183_cov_1.067568_g80017_i0reverse_frame_2 - 0.11 12.3 0.1 0.17 11.7 0.1 1.3 1 0 0 1 1 1 0 FAM212 family Vitelline_membr PF10542.9 NODE_87952_length_183_cov_1.067568_g80011_i0reverse_frame_2 - 0.024 14.5 0.2 0.61 10.0 0.1 2.1 2 0 0 2 2 2 0 Vitelline membrane cysteine-rich region zf-C2H2_assoc2 PF16624.5 NODE_87948_length_183_cov_1.074324_g80007_i0forward_frame_3 - 0.076 14.0 0.2 0.076 14.0 0.2 1.1 1 0 0 1 1 1 0 Unstructured region upstream of a zinc-finger Albumin_I PF08027.11 NODE_87942_length_183_cov_1.074324_g80001_i0forward_frame_3 - 0.014 15.0 2.3 0.014 15.0 1.5 1.6 1 1 0 1 1 1 0 Albumin I chain b Spp-24 PF07448.11 NODE_87939_length_183_cov_1.074324_g79998_i0reverse_frame_2 - 0.0092 16.1 0.4 0.016 15.4 0.4 1.4 1 0 0 1 1 1 1 Secreted phosphoprotein 24 (Spp-24) cystatin-like domain DUF3698 PF12479.8 NODE_87938_length_183_cov_1.074324_g79997_i0forward_frame_3 - 0.056 14.0 0.8 0.064 13.8 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3698) RVT_3 PF13456.6 NODE_87937_length_183_cov_1.074324_g79996_i0reverse_frame_3 - 0.18 11.6 0.0 0.2 11.5 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase-like DUF2385 PF09539.10 NODE_87933_length_183_cov_1.074324_g79992_i0forward_frame_2 - 0.037 14.6 0.1 0.045 14.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2385) ArsP_2 PF11449.8 NODE_87932_length_183_cov_1.074324_g79991_i0forward_frame_2 - 0.26 10.5 0.0 0.26 10.5 0.0 1.0 1 0 0 1 1 1 0 Putative, 10TM heavy-metal exporter DNA_ligase_A_C PF04679.15 NODE_87920_length_183_cov_1.074324_g79979_i0forward_frame_3 - 0.058 14.0 0.2 0.07 13.7 0.2 1.0 1 0 0 1 1 1 0 ATP dependent DNA ligase C terminal region RE_HaeIII PF09556.10 NODE_87919_length_183_cov_1.074324_g79978_i0reverse_frame_2 - 0.11 11.6 0.2 0.12 11.4 0.2 1.1 1 0 0 1 1 1 0 HaeIII restriction endonuclease PDE6_gamma PF04868.12 NODE_87919_length_183_cov_1.074324_g79978_i0forward_frame_3 - 0.0098 16.1 1.3 0.011 15.9 1.3 1.1 1 0 0 1 1 1 1 Retinal cGMP phosphodiesterase, gamma subunit Lyx_isomer PF07385.12 NODE_87914_length_183_cov_1.081081_g79973_i0forward_frame_3 - 0.031 13.6 0.0 0.035 13.4 0.0 1.0 1 0 0 1 1 1 0 D-lyxose isomerase FBPase_2 PF06874.11 NODE_87909_length_183_cov_1.081081_g79968_i0reverse_frame_2 - 0.044 12.1 0.0 0.046 12.0 0.0 1.0 1 0 0 1 1 1 0 Firmicute fructose-1,6-bisphosphatase Claudin_3 PF06653.11 NODE_87903_length_183_cov_1.081081_g79962_i0forward_frame_3 - 0.016 15.1 2.0 0.016 15.1 2.0 1.0 1 0 0 1 1 1 0 Tight junction protein, Claudin-like DUF3149 PF11346.8 NODE_87903_length_183_cov_1.081081_g79962_i0forward_frame_3 - 0.086 12.5 2.1 0.12 12.0 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) DUF429 PF04250.13 NODE_87901_length_183_cov_1.081081_g79960_i0forward_frame_3 - 0.027 14.2 0.0 0.029 14.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF429) Psb28 PF03912.14 NODE_87893_length_183_cov_1.081081_g79952_i0forward_frame_2 - 0.075 13.3 0.0 0.083 13.2 0.0 1.1 1 0 0 1 1 1 0 Psb28 protein UPF0560 PF10577.9 NODE_87893_length_183_cov_1.081081_g79952_i0forward_frame_2 - 0.078 11.5 0.0 0.094 11.2 0.0 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 Mrr_cat PF04471.12 NODE_87893_length_183_cov_1.081081_g79952_i0forward_frame_2 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Restriction endonuclease zf-RING_2 PF13639.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 3.3e-14 52.9 4.0 3.9e-14 52.7 4.0 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 4.2e-10 39.3 3.1 5.4e-10 38.9 3.1 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 3.9e-09 36.7 5.0 5.3e-09 36.2 5.0 1.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 2.5e-08 33.5 5.5 6.2e-08 32.2 2.3 2.1 2 0 0 2 2 2 1 RING-like zinc finger Prok-RING_4 PF14447.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 2.6e-07 30.4 2.7 3.2e-07 30.1 2.7 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 2.7e-07 30.3 2.2 3.5e-07 30.0 2.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 3.5e-07 30.1 1.8 4.4e-07 29.7 1.8 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 5.8e-07 29.3 3.8 7.6e-07 28.9 3.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 1.6e-06 28.0 3.9 2.4e-05 24.3 0.3 2.1 2 0 0 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 1.7e-05 24.8 0.7 1.8e-05 24.7 0.7 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.00012 21.7 0.6 0.00015 21.3 0.6 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.00069 19.7 4.2 0.0015 18.6 4.2 1.5 1 1 0 1 1 1 1 RING-variant domain zf-RING_4 PF14570.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.0096 15.7 0.8 0.013 15.2 0.8 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain FANCL_C PF11793.8 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.019 15.1 4.4 0.17 12.1 4.4 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING-like PF08746.11 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.024 14.9 1.4 0.03 14.6 1.4 1.2 1 0 0 1 1 1 0 RING-like domain zf-C3HC4_4 PF15227.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.045 13.9 3.8 0.28 11.4 4.2 2.1 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING Rtf2 PF04641.12 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.048 13.0 0.0 0.051 12.9 0.0 1.0 1 0 0 1 1 1 0 Rtf2 RING-finger zf-RING_6 PF14835.6 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.049 13.5 0.5 0.054 13.4 0.5 1.2 1 0 0 1 1 1 0 zf-RING of BARD1-type protein UPF0547 PF10571.9 NODE_87886_length_183_cov_1.081081_g79945_i0forward_frame_3 - 0.05 13.7 3.0 3 8.0 0.2 2.5 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 YolD PF08863.10 NODE_87880_length_183_cov_1.081081_g79939_i0reverse_frame_2 - 0.091 12.8 0.5 0.098 12.7 0.5 1.0 1 0 0 1 1 1 0 YolD-like protein Toxin_GhoT_OrtT PF10753.9 NODE_87875_length_183_cov_1.081081_g79934_i0reverse_frame_3 - 0.068 13.4 0.2 0.085 13.1 0.2 1.2 1 0 0 1 1 1 0 Toxin GhoT_OrtT VATC PF18716.1 NODE_87865_length_183_cov_1.081081_g79924_i0reverse_frame_2 - 0.055 13.3 1.2 0.076 12.9 1.2 1.2 1 0 0 1 1 1 0 Vms1-associating treble clef domain CDC4_D PF16856.5 NODE_87865_length_183_cov_1.081081_g79924_i0forward_frame_2 - 0.037 13.9 0.4 0.049 13.5 0.4 1.2 1 0 0 1 1 1 0 Cell division control protein 4 dimerisation domain PSRT PF07636.11 NODE_87861_length_183_cov_1.081081_g79920_i0forward_frame_3 - 0.082 12.6 0.9 0.12 12.1 0.9 1.3 1 0 0 1 1 1 0 PSRT DUF1082 PF06449.11 NODE_87861_length_183_cov_1.081081_g79920_i0forward_frame_3 - 0.13 12.1 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1082) Herpes_Helicase PF02689.14 NODE_87857_length_183_cov_1.081081_g79916_i0reverse_frame_2 - 0.055 11.4 0.3 0.057 11.3 0.3 1.0 1 0 0 1 1 1 0 Helicase TES PF08034.11 NODE_87853_length_183_cov_1.081081_g79912_i0reverse_frame_2 - 0.086 13.1 0.1 0.14 12.4 0.1 1.4 1 0 0 1 1 1 0 Trematode eggshell synthesis protein DUF2207 PF09972.9 NODE_87853_length_183_cov_1.081081_g79912_i0forward_frame_3 - 2.1 7.0 3.5 2 7.1 3.5 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FBA_1 PF07734.13 NODE_87851_length_183_cov_1.081081_g79910_i0reverse_frame_3 - 0.041 13.8 0.0 0.045 13.7 0.0 1.0 1 0 0 1 1 1 0 F-box associated Integrase_Zn PF02022.19 NODE_87851_length_183_cov_1.081081_g79910_i0reverse_frame_3 - 0.046 13.7 0.1 0.09 12.7 0.1 1.5 1 0 0 1 1 1 0 Integrase Zinc binding domain Rep_Org_C PF06926.11 NODE_87851_length_183_cov_1.081081_g79910_i0reverse_frame_3 - 0.11 12.8 0.0 0.13 12.6 0.0 1.1 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus Plasmod_Pvs28 PF06247.11 NODE_87851_length_183_cov_1.081081_g79910_i0reverse_frame_2 - 0.024 14.9 1.0 0.037 14.3 1.0 1.5 1 1 0 1 1 1 0 Pvs28 EGF domain FXR_C1 PF16096.5 NODE_87850_length_183_cov_1.081081_g79909_i0forward_frame_3 - 0.25 11.6 6.8 0.3 11.3 6.8 1.2 1 0 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 FoP_duplication PF13865.6 NODE_87849_length_183_cov_1.081081_g79908_i0reverse_frame_2 - 3.4 8.3 8.9 4.1 8.0 8.9 1.1 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 VP_N-CPKC PF11475.8 NODE_87844_length_183_cov_1.081081_g79903_i0forward_frame_3 - 0.075 12.9 3.1 0.12 12.3 3.1 1.3 1 0 0 1 1 1 0 Virion protein N terminal domain zinc_ribbon_13 PF09855.9 NODE_87841_length_183_cov_1.081081_g79900_i0reverse_frame_2 - 0.0035 17.5 0.0 0.0041 17.3 0.0 1.1 1 0 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Cas_Cas6 PF01881.16 NODE_87837_length_183_cov_1.087838_g79896_i0reverse_frame_2 - 0.26 11.9 0.4 0.51 10.9 0.1 1.6 2 0 0 2 2 2 0 CRISPR associated protein Cas6 DUF3586 PF12131.8 NODE_87835_length_183_cov_1.087838_g79894_i0forward_frame_2 - 0.06 13.6 2.5 0.11 12.7 2.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3586) DUF5476 PF17570.2 NODE_87835_length_183_cov_1.087838_g79894_i0forward_frame_2 - 0.12 12.8 1.4 0.16 12.4 1.4 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5476) MEDS PF14417.6 NODE_87829_length_183_cov_1.114865_g79888_i0forward_frame_2 - 0.12 12.2 0.2 0.12 12.2 0.2 1.1 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain DUF5556 PF17711.1 NODE_87822_length_183_cov_1.141892_g79881_i0forward_frame_2 - 0.055 13.4 0.5 0.063 13.2 0.5 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5556) 2TM PF13239.6 NODE_87821_length_183_cov_1.148649_g79880_i0reverse_frame_3 - 0.2 12.0 1.4 0.22 11.9 1.4 1.1 1 0 0 1 1 1 0 2TM domain Chorein_N PF12624.7 NODE_87821_length_183_cov_1.148649_g79880_i0forward_frame_3 - 0.071 13.2 0.0 0.071 13.2 0.0 1.0 1 0 0 1 1 1 0 N-terminal region of Chorein or VPS13 DNA_pol_viral_C PF00336.18 NODE_87812_length_183_cov_1.162162_g79871_i0forward_frame_3 - 0.059 12.8 0.0 0.059 12.8 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase (viral) C-terminal domain DUF3263 PF11662.8 NODE_87809_length_183_cov_1.175676_g79868_i0reverse_frame_3 - 0.027 14.3 0.0 1.9 8.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3263) GATase_7 PF13537.6 NODE_87808_length_183_cov_1.182432_g79867_i0reverse_frame_3 - 0.13 12.1 0.0 0.15 12.0 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferase domain OATP PF03137.20 NODE_87806_length_183_cov_1.189189_g79865_i0reverse_frame_2 - 0.0021 16.5 5.2 0.0022 16.4 5.2 1.1 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family CrgA PF06781.12 NODE_87806_length_183_cov_1.189189_g79865_i0reverse_frame_2 - 0.22 11.6 3.6 0.26 11.4 3.6 1.2 1 0 0 1 1 1 0 Cell division protein CrgA MCLC PF05934.11 NODE_87797_length_183_cov_1.216216_g79856_i0reverse_frame_2 - 1.9 7.1 4.7 2.1 7.0 4.7 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Ldh_1_C PF02866.18 NODE_87796_length_183_cov_1.216216_g79855_i0reverse_frame_2 - 0.013 15.4 0.0 0.013 15.4 0.0 1.1 1 0 0 1 1 1 0 lactate/malate dehydrogenase, alpha/beta C-terminal domain SAM_3 PF18016.1 NODE_87795_length_183_cov_1.222973_g79854_i0forward_frame_2 - 0.031 14.1 0.0 0.039 13.8 0.0 1.1 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) BNR_2 PF13088.6 NODE_87794_length_183_cov_1.222973_g79853_i0forward_frame_3 - 0.0096 15.3 0.2 0.01 15.2 0.2 1.0 1 0 0 1 1 1 1 BNR repeat-like domain CXCL17 PF15211.6 NODE_87786_length_183_cov_1.263514_g79845_i0forward_frame_2 - 0.06 14.1 0.1 0.065 14.0 0.1 1.2 1 0 0 1 1 1 0 VEGF co-regulated chemokine 1 DUF3862 PF12978.7 NODE_87785_length_183_cov_1.263514_g79844_i0reverse_frame_3 - 0.071 12.9 0.1 0.071 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3862) NHase_alpha PF02979.16 NODE_87779_length_183_cov_1.277027_g79838_i0reverse_frame_2 - 0.3 10.4 0.8 0.33 10.3 0.8 1.0 1 0 0 1 1 1 0 Nitrile hydratase, alpha chain Med6 PF04934.14 NODE_87774_length_183_cov_1.290541_g79833_i0reverse_frame_2 - 0.0088 15.8 0.2 0.01 15.7 0.2 1.1 1 0 0 1 1 1 1 MED6 mediator sub complex component DUF4579 PF15158.6 NODE_87772_length_183_cov_1.290541_g79831_i0forward_frame_2 - 0.03 14.1 0.2 0.033 14.0 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) TMEM154 PF15102.6 NODE_87772_length_183_cov_1.290541_g79831_i0forward_frame_2 - 0.031 14.2 0.1 0.035 14.0 0.1 1.1 1 0 0 1 1 1 0 TMEM154 protein family TPR_1 PF00515.28 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 8.2e-06 25.4 1.0 1.1e-05 25.0 1.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 3.2e-05 23.8 0.6 4.7e-05 23.3 0.6 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.00025 21.3 0.1 0.00029 21.1 0.1 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.00093 19.0 0.1 0.0012 18.6 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.00093 19.1 0.0 0.0013 18.6 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.0012 18.8 0.2 0.0017 18.3 0.2 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.0074 16.6 0.6 0.018 15.4 0.1 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.052 14.4 0.0 0.057 14.3 0.0 1.1 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_87767_length_183_cov_1.304054_g79826_i0reverse_frame_3 - 0.14 11.8 1.7 0.3 10.8 0.5 1.9 1 1 1 2 2 2 0 TPR repeat Wza_C PF18412.1 NODE_87765_length_183_cov_1.310811_g79824_i0reverse_frame_2 - 0.15 11.9 0.8 0.3 10.9 0.8 1.5 1 0 0 1 1 1 0 Outer-membrane lipoprotein Wza C-terminal domain OTT_1508_deam PF14441.6 NODE_87765_length_183_cov_1.310811_g79824_i0forward_frame_2 - 0.17 11.9 2.8 0.22 11.6 2.8 1.2 1 0 0 1 1 1 0 OTT_1508-like deaminase Proteasom_Rpn13 PF04683.13 NODE_87762_length_183_cov_1.317568_g79821_i0forward_frame_3 - 0.083 13.4 0.0 0.098 13.2 0.0 1.1 1 0 0 1 1 1 0 Proteasome complex subunit Rpn13 ubiquitin receptor RWP-RK PF02042.15 NODE_87761_length_183_cov_1.324324_g79820_i0forward_frame_2 - 0.12 12.4 0.0 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 RWP-RK domain Toxin_24 PF08094.11 NODE_87760_length_183_cov_1.331081_g79819_i0forward_frame_3 - 0.26 11.2 4.7 0.29 11.0 0.2 2.2 2 0 0 2 2 2 0 Conotoxin TVIIA/GS family PilI PF10623.9 NODE_87757_length_183_cov_1.337838_g79816_i0reverse_frame_2 - 0.91 9.7 3.4 0.76 10.0 1.7 1.6 1 1 1 2 2 2 0 Plasmid conjugative transfer protein PilI DUF5570 PF17731.1 NODE_87756_length_183_cov_1.344595_g79815_i0forward_frame_3 - 0.11 12.5 0.1 0.14 12.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5570) DUF2929 PF11151.8 NODE_87752_length_183_cov_1.344595_g79811_i0forward_frame_3 - 0.031 14.5 1.1 0.043 14.1 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2929) DUF1281_C PF18406.1 NODE_87750_length_183_cov_1.351351_g79809_i0reverse_frame_2 - 0.086 12.6 0.0 0.089 12.5 0.0 1.1 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein DUF1985 PF09331.11 NODE_87748_length_183_cov_1.351351_g79807_i0reverse_frame_2 - 0.1 12.6 0.2 0.11 12.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1985) DUF384 PF04064.13 NODE_87747_length_183_cov_1.351351_g79806_i0reverse_frame_2 - 0.086 12.7 0.0 0.088 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF384) HSP90 PF00183.18 NODE_87743_length_183_cov_1.351351_g79802_i0reverse_frame_3 - 0.029 13.3 0.4 0.029 13.3 0.4 1.0 1 0 0 1 1 1 0 Hsp90 protein Aminopep PF10023.9 NODE_87735_length_183_cov_1.398649_g79794_i0forward_frame_2 - 0.0079 15.6 0.5 0.008 15.6 0.5 1.0 1 0 0 1 1 1 1 Putative aminopeptidase Vhr1 PF04001.13 NODE_87735_length_183_cov_1.398649_g79794_i0forward_frame_2 - 0.0093 16.2 0.6 0.12 12.7 0.1 2.1 1 1 1 2 2 2 1 Transcription factor Vhr1 Ycf34 PF10718.9 NODE_87734_length_183_cov_1.412162_g79793_i0reverse_frame_3 - 0.025 15.2 0.4 0.028 15.1 0.4 1.1 1 0 0 1 1 1 0 Hypothetical chloroplast protein Ycf34 baeRF_family7 PF18849.1 NODE_87734_length_183_cov_1.412162_g79793_i0reverse_frame_2 - 0.074 13.3 0.0 0.082 13.1 0.0 1.0 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 7 PTPRCAP PF15713.5 NODE_87733_length_183_cov_1.412162_g79792_i0reverse_frame_3 - 0.91 9.8 3.0 0.95 9.7 2.7 1.3 1 1 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated zf-CGNR PF11706.8 NODE_87731_length_183_cov_1.418919_g79790_i0forward_frame_3 - 0.34 10.8 3.0 0.19 11.6 1.3 1.6 2 0 0 2 2 2 0 CGNR zinc finger MCM PF00493.23 NODE_87730_length_183_cov_1.425676_g79789_i0forward_frame_2 - 3.4e-25 88.4 0.2 3.7e-25 88.3 0.2 1.0 1 0 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 NODE_87730_length_183_cov_1.425676_g79789_i0forward_frame_2 - 0.0016 17.9 0.0 0.0018 17.7 0.0 1.0 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 NODE_87730_length_183_cov_1.425676_g79789_i0forward_frame_2 - 0.0075 16.3 0.0 0.0078 16.2 0.0 1.0 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 NODE_87730_length_183_cov_1.425676_g79789_i0forward_frame_2 - 0.035 13.9 0.0 0.04 13.8 0.0 1.0 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SPC25 PF06703.11 NODE_87728_length_183_cov_1.432432_g79787_i0reverse_frame_3 - 0.15 11.8 3.9 0.18 11.6 3.9 1.0 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF2655 PF10848.8 NODE_87727_length_183_cov_1.432432_g79786_i0reverse_frame_2 - 0.032 14.5 0.3 0.034 14.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2655) CMV_US PF08001.11 NODE_87723_length_183_cov_1.452703_g79782_i0forward_frame_3 - 0.38 10.0 1.4 0.42 9.8 1.4 1.1 1 0 0 1 1 1 0 CMV US Pep3_Vps18 PF05131.14 NODE_87722_length_183_cov_1.459459_g79781_i0forward_frame_3 - 3e-14 53.1 0.4 3.1e-14 53.0 0.4 1.0 1 0 0 1 1 1 1 Pep3/Vps18/deep orange family IPPT PF01715.17 NODE_87719_length_183_cov_1.472973_g79778_i0forward_frame_2 - 0.18 11.6 0.0 0.18 11.6 0.0 1.0 1 0 0 1 1 1 0 IPP transferase BPL_LplA_LipB_2 PF16917.5 NODE_87714_length_183_cov_1.513514_g79773_i0forward_frame_2 - 0.18 11.3 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Biotin/lipoate A/B protein ligase family DUF4164 PF13747.6 NODE_87712_length_183_cov_1.520270_g79771_i0reverse_frame_2 - 0.015 15.6 0.1 0.015 15.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4164) Paired_CXXCH_1 PF09699.10 NODE_87707_length_183_cov_1.540541_g79766_i0forward_frame_2 - 0.0012 18.6 0.6 0.0021 17.7 0.6 1.7 1 1 0 1 1 1 1 Doubled CXXCH motif (Paired_CXXCH_1) TNFR_c6 PF00020.18 NODE_87707_length_183_cov_1.540541_g79766_i0forward_frame_2 - 0.031 14.7 5.3 0.043 14.2 5.3 1.4 1 1 0 1 1 1 0 TNFR/NGFR cysteine-rich region Baculo_19 PF04798.12 NODE_87696_length_183_cov_1.587838_g79755_i0forward_frame_2 - 0.098 12.4 0.0 0.1 12.3 0.0 1.0 1 0 0 1 1 1 0 Baculovirus 19 kDa protein conserved region NYD-SP28_assoc PF14775.6 NODE_87695_length_183_cov_1.594595_g79754_i0forward_frame_3 - 0.062 13.4 1.0 0.062 13.4 1.0 1.5 2 0 0 2 2 2 0 Sperm tail C-terminal domain DUF2783 PF10932.8 NODE_87694_length_183_cov_1.594595_g79753_i0reverse_frame_3 - 0.05 13.3 1.3 0.067 12.9 1.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2783) Asp_Glu_race_2 PF14669.6 NODE_87692_length_183_cov_1.594595_g79751_i0forward_frame_3 - 0.017 14.8 0.2 0.021 14.5 0.2 1.1 1 0 0 1 1 1 0 Putative aspartate racemase Lactamase_B_4 PF13691.6 NODE_87691_length_183_cov_1.594595_g79750_i0reverse_frame_2 - 0.1 12.3 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 tRNase Z endonuclease Sprouty PF05210.13 NODE_87689_length_183_cov_1.601351_g79748_i0reverse_frame_3 - 0.013 15.8 0.7 0.014 15.7 0.7 1.1 1 0 0 1 1 1 0 Sprouty protein (Spry) MTCP1 PF08991.10 NODE_87688_length_183_cov_1.601351_g79747_i0reverse_frame_3 - 0.0029 17.8 0.1 0.0034 17.6 0.1 1.1 1 0 0 1 1 1 1 Mature-T-Cell Proliferation I type DUF1676 PF07898.13 NODE_87688_length_183_cov_1.601351_g79747_i0forward_frame_3 - 0.011 15.8 2.1 0.011 15.8 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) TPR_14 PF13428.6 NODE_87686_length_183_cov_1.608108_g79745_i0reverse_frame_3 - 0.03 15.1 0.2 0.039 14.8 0.2 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat zf-AN1 PF01428.16 NODE_87679_length_183_cov_1.614865_g79738_i0reverse_frame_3 - 0.015 15.4 4.3 0.015 15.4 4.3 2.2 2 1 1 3 3 3 0 AN1-like Zinc finger ODV-E18 PF10717.9 NODE_87679_length_183_cov_1.614865_g79738_i0forward_frame_2 - 0.18 11.7 1.7 0.22 11.4 1.7 1.2 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Wzy_C PF04932.15 NODE_87678_length_183_cov_1.614865_g79737_i0forward_frame_3 - 0.2 11.3 4.9 0.2 11.2 4.9 1.0 1 0 0 1 1 1 0 O-Antigen ligase Sigma_reg_N PF13800.6 NODE_87676_length_183_cov_1.614865_g79735_i0forward_frame_2 - 0.044 14.1 2.0 0.058 13.7 2.0 1.1 1 0 0 1 1 1 0 Sigma factor regulator N-terminal SCIMP PF15050.6 NODE_87676_length_183_cov_1.614865_g79735_i0forward_frame_2 - 0.77 10.2 2.1 0.84 10.1 2.1 1.1 1 0 0 1 1 1 0 SCIMP protein IL1 PF00340.19 NODE_87675_length_183_cov_1.614865_g79734_i0forward_frame_2 - 0.023 14.4 0.0 0.023 14.3 0.0 1.1 1 0 0 1 1 1 0 Interleukin-1 / 18 CTP-dep_RFKase PF01982.16 NODE_87670_length_183_cov_1.621622_g79729_i0reverse_frame_3 - 0.084 13.0 0.1 0.096 12.8 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function DUF120 s48_45 PF07422.13 NODE_87670_length_183_cov_1.621622_g79729_i0forward_frame_2 - 0.1 13.2 0.1 0.11 13.1 0.1 1.1 1 0 0 1 1 1 0 Sexual stage antigen s48/45 domain zf-U1 PF06220.12 NODE_87668_length_183_cov_1.621622_g79727_i0reverse_frame_3 - 0.15 11.9 1.5 0.48 10.2 0.1 2.1 2 0 0 2 2 2 0 U1 zinc finger TM2 PF05154.16 NODE_87667_length_183_cov_1.621622_g79726_i0forward_frame_2 - 0.039 14.3 0.1 0.055 13.8 0.1 1.2 1 0 0 1 1 1 0 TM2 domain EGF_CA PF07645.15 NODE_87662_length_183_cov_1.621622_g79721_i0forward_frame_3 - 0.053 13.7 0.2 0.076 13.2 0.2 1.3 1 0 0 1 1 1 0 Calcium-binding EGF domain Ribosomal_L23eN PF03939.13 NODE_87660_length_183_cov_1.621622_g79719_i0reverse_frame_3 - 0.053 13.7 0.3 0.068 13.4 0.3 1.2 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain DUF3995 PF13160.6 NODE_87660_length_183_cov_1.621622_g79719_i0forward_frame_2 - 0.031 14.6 0.8 0.033 14.5 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) Spc7 PF08317.11 NODE_87653_length_183_cov_1.628378_g79712_i0reverse_frame_3 - 0.071 12.0 0.1 0.076 11.9 0.1 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein FeThRed_B PF02943.15 NODE_87648_length_183_cov_1.635135_g79707_i0forward_frame_3 - 2.1 8.4 12.4 0.87 9.6 10.5 1.4 1 1 1 2 2 2 0 Ferredoxin thioredoxin reductase catalytic beta chain DUF1652 PF07865.11 NODE_87648_length_183_cov_1.635135_g79707_i0forward_frame_2 - 0.052 13.4 0.3 0.073 12.9 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) Med9 PF07544.13 NODE_87643_length_183_cov_1.668919_g79702_i0reverse_frame_2 - 0.0019 18.2 1.3 0.0022 18.1 1.3 1.2 1 0 0 1 1 1 1 RNA polymerase II transcription mediator complex subunit 9 WD40_alt PF14077.6 NODE_87643_length_183_cov_1.668919_g79702_i0reverse_frame_2 - 0.036 13.9 1.1 0.061 13.2 0.1 1.8 1 1 1 2 2 2 0 Alternative WD40 repeat motif TMPIT PF07851.13 NODE_87643_length_183_cov_1.668919_g79702_i0reverse_frame_2 - 0.44 9.7 2.8 0.43 9.8 2.8 1.0 1 0 0 1 1 1 0 TMPIT-like protein adh_short PF00106.25 NODE_87639_length_183_cov_1.689189_g79698_i0reverse_frame_3 - 0.0031 17.0 0.0 0.0035 16.8 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_87639_length_183_cov_1.689189_g79698_i0reverse_frame_3 - 0.02 14.5 0.0 0.022 14.3 0.0 1.0 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Methyltransf_19 PF04672.12 NODE_87639_length_183_cov_1.689189_g79698_i0reverse_frame_3 - 0.13 11.8 0.0 0.14 11.6 0.0 1.0 1 0 0 1 1 1 0 S-adenosyl methyltransferase zf-CCCH_6 PF18585.1 NODE_87636_length_183_cov_1.709459_g79695_i0reverse_frame_3 - 2 8.4 7.4 3.7 7.5 7.4 1.5 1 1 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 Chloroa_b-bind PF00504.21 NODE_87632_length_183_cov_1.722973_g79691_i0forward_frame_3 - 7.6e-08 33.1 0.1 8.2e-08 32.9 0.1 1.0 1 0 0 1 1 1 1 Chlorophyll A-B binding protein RVT_2 PF07727.14 NODE_87631_length_183_cov_1.729730_g79690_i0reverse_frame_3 - 0.048 13.3 0.0 0.05 13.2 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Spore_GerQ PF09671.10 NODE_87631_length_183_cov_1.729730_g79690_i0reverse_frame_3 - 0.11 12.5 0.0 0.15 12.1 0.0 1.1 1 0 0 1 1 1 0 Spore coat protein (Spore_GerQ) DNA_pol_B_thumb PF14791.6 NODE_87631_length_183_cov_1.729730_g79690_i0reverse_frame_2 - 0.048 13.8 0.2 0.051 13.7 0.2 1.1 1 0 0 1 1 1 0 DNA polymerase beta thumb Hen1_Lam_C PF18441.1 NODE_87629_length_183_cov_1.736486_g79688_i0reverse_frame_3 - 0.15 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Hen1 La-motif C-terminal domain zf-C3HC4_2 PF13923.6 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.00054 19.8 9.5 0.00095 19.0 9.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.0009 19.2 10.9 0.0017 18.3 10.9 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_2 PF13639.6 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.0063 16.8 10.2 0.0063 16.8 10.2 1.5 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_4 PF15227.6 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.0081 16.3 11.4 0.0081 16.3 11.4 1.7 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 NODE_87629_length_183_cov_1.736486_g79688_i0forward_frame_3 - 0.012 15.4 9.9 0.012 15.4 9.9 1.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) MFS_1 PF07690.16 NODE_87626_length_183_cov_1.750000_g79685_i0reverse_frame_3 - 8.6e-05 21.6 1.3 8.6e-05 21.6 1.3 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Pox_A21 PF05323.12 NODE_87626_length_183_cov_1.750000_g79685_i0forward_frame_3 - 0.066 13.8 0.3 0.071 13.7 0.3 1.1 1 0 0 1 1 1 0 Poxvirus A21 Protein Arm-DNA-bind_1 PF09003.10 NODE_87626_length_183_cov_1.750000_g79685_i0forward_frame_2 - 0.042 14.0 0.1 0.043 14.0 0.1 1.2 1 0 0 1 1 1 0 Bacteriophage lambda integrase, Arm DNA-binding domain HTH_9 PF08221.11 NODE_87618_length_183_cov_1.790541_g79677_i0forward_frame_3 - 0.044 13.9 0.2 0.068 13.3 0.2 1.2 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain KduI PF04962.12 NODE_87617_length_183_cov_1.790541_g79676_i0reverse_frame_2 - 0.022 14.1 0.1 0.023 14.0 0.1 1.1 1 0 0 1 1 1 0 KduI/IolB family PRY PF13765.6 NODE_87608_length_183_cov_1.844595_g79667_i0reverse_frame_3 - 0.094 12.4 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 SPRY-associated domain DUF1027 PF06265.11 NODE_87601_length_183_cov_1.864865_g79660_i0reverse_frame_3 - 0.13 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1027) Tetraspanin PF00335.20 NODE_87596_length_183_cov_1.891892_g79655_i0reverse_frame_3 - 4.3 7.0 10.4 5.1 6.7 10.4 1.1 1 0 0 1 1 1 0 Tetraspanin family DbpA PF03880.15 NODE_87596_length_183_cov_1.891892_g79655_i0forward_frame_2 - 0.087 12.8 0.2 0.096 12.7 0.2 1.1 1 0 0 1 1 1 0 DbpA RNA binding domain zf-tcix PF14952.6 NODE_87595_length_183_cov_1.891892_g79654_i0reverse_frame_3 - 0.14 11.7 3.5 0.25 11.0 3.5 1.3 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding DUF4385 PF14328.6 NODE_87593_length_183_cov_1.891892_g79652_i0forward_frame_2 - 0.046 13.8 0.4 0.05 13.7 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4385) SRR PF07709.11 NODE_87592_length_183_cov_1.891892_g79651_i0forward_frame_2 - 0.067 13.6 1.2 0.72 10.5 0.2 2.4 2 0 0 2 2 2 0 Seven Residue Repeat SK_channel PF03530.14 NODE_87591_length_183_cov_1.891892_g79650_i0forward_frame_2 - 0.055 13.5 3.0 0.067 13.2 3.0 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel GlgS PF08971.11 NODE_87586_length_183_cov_1.918919_g79645_i0forward_frame_3 - 0.025 14.6 0.1 0.027 14.5 0.1 1.2 1 0 0 1 1 1 0 Glycogen synthesis protein MORN PF02493.20 NODE_87585_length_183_cov_1.918919_g79644_i0reverse_frame_2 - 0.0006 19.5 3.9 0.0039 17.0 1.8 2.2 2 0 0 2 2 2 2 MORN repeat Nucleic_acid_bd PF13820.6 NODE_87581_length_183_cov_1.952703_g79640_i0reverse_frame_2 - 0.11 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Putative nucleic acid-binding region Adeno_E3B PF03376.14 NODE_87579_length_183_cov_2.013514_g79638_i0forward_frame_2 - 0.03 14.6 0.3 0.036 14.3 0.3 1.2 1 0 0 1 1 1 0 Adenovirus E3B protein HATPase_c PF02518.26 NODE_87578_length_183_cov_2.020270_g79637_i0reverse_frame_3 - 1.6e-07 31.8 0.1 1.6e-07 31.8 0.1 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 NODE_87578_length_183_cov_2.020270_g79637_i0reverse_frame_3 - 0.097 12.5 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_gyraseA_C PF03989.13 NODE_87576_length_183_cov_2.047297_g79635_i0forward_frame_2 - 0.059 12.9 0.0 0.074 12.5 0.0 1.2 1 0 0 1 1 1 0 DNA gyrase C-terminal domain, beta-propeller # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks459.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks459.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks459.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks459.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LCM PF04072.14 ORF92330 - 2.5e-27 96.0 0.0 4.1e-27 95.4 0.0 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase PUF PF00806.19 ORF89894 - 7.5e-15 53.7 0.5 0.0005 19.6 0.0 3.6 3 0 0 3 3 3 3 Pumilio-family RNA binding repeat DUF4974 PF16344.5 ORF89894 - 0.029 14.4 0.2 0.15 12.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4974) Na_Pi_cotrans PF02690.15 ORF89616 - 4.5e-18 65.7 7.4 4.5e-18 65.7 7.4 1.6 2 0 0 2 2 2 1 Na+/Pi-cotransporter PsbM PF05151.12 ORF89616 - 4.8 7.1 8.4 0.67 9.8 2.7 2.5 2 0 0 2 2 2 0 Photosystem II reaction centre M protein (PsbM) Ank_2 PF12796.7 ORF87459 - 5e-51 171.2 0.3 8e-16 58.4 0.0 4.0 2 1 3 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF87459 - 2.3e-39 133.3 1.3 6.8e-10 39.3 0.0 5.5 3 2 2 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF87459 - 6.8e-29 99.0 7.1 3.2e-05 24.2 0.0 7.4 7 0 0 7 7 7 7 Ankyrin repeat Ank_5 PF13857.6 ORF87459 - 4.1e-28 97.1 3.6 2.7e-09 37.1 0.1 6.4 2 2 5 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF87459 - 6.8e-27 90.6 0.0 0.00017 21.7 0.1 7.8 8 0 0 8 8 8 5 Ankyrin repeat ubiquitin PF00240.23 ORF87459 - 0.0016 18.2 0.0 0.0029 17.3 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family T2SS-T3SS_pil_N PF13629.6 ORF87459 - 0.038 13.7 1.5 2.3 8.0 0.0 4.1 5 1 1 6 6 6 0 Pilus formation protein N terminal region Peptidase_C1 PF00112.23 ORF83922 - 1.3e-65 221.6 7.0 2e-65 220.9 7.0 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF83922 - 2.9e-14 53.2 4.2 7.5e-14 51.9 4.2 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF83922 - 0.0063 15.3 3.3 0.064 12.0 0.2 2.8 3 0 0 3 3 3 2 Peptidase C1-like family PIP5K PF01504.18 ORF80228 - 1.1e-25 90.4 4.6 1.1e-25 90.4 4.6 2.0 1 1 1 2 2 2 1 Phosphatidylinositol-4-phosphate 5-Kinase OATP PF03137.20 ORF80228 - 1.6 6.9 4.0 0.32 9.2 0.1 1.6 2 0 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family DUF4795 PF16043.5 ORF76085 - 0.2 11.3 0.4 0.35 10.4 0.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUSP PF06337.12 ORF7588 - 3.7e-18 65.9 5.0 3.7e-18 65.9 5.0 1.8 2 0 0 2 2 2 1 DUSP domain zf-MYND PF01753.18 ORF7588 - 0.014 15.5 1.2 0.03 14.4 1.2 1.5 1 0 0 1 1 1 0 MYND finger DUF5305 PF17231.2 ORF73193 - 0.0013 18.2 2.2 0.0057 16.1 2.4 1.9 2 1 0 2 2 2 1 Family of unknown function (DUF5305) NIF PF03031.18 ORF69680 - 3.5e-11 43.1 1.3 4.3e-11 42.8 0.2 1.8 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase HTH_48 PF17906.1 ORF69680 - 0.028 14.5 0.1 0.071 13.2 0.1 1.6 1 0 0 1 1 1 0 HTH domain in Mos1 transposase DUF3716 PF12511.8 ORF69458 - 0.93 9.6 8.4 2.6 8.1 0.9 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3716) DUF5305 PF17231.2 ORF58062 - 0.0013 18.2 2.2 0.0057 16.1 2.4 1.9 2 1 0 2 2 2 1 Family of unknown function (DUF5305) UPAR_LY6_2 PF16975.5 ORF52313 - 0.36 11.1 11.1 0.94 9.7 0.4 2.5 1 1 1 2 2 2 0 Ly6/PLAUR domain-containing protein 6, Lypd6 DUF5305 PF17231.2 ORF39408 - 0.0013 18.2 2.2 0.0057 16.1 2.4 1.9 2 1 0 2 2 2 1 Family of unknown function (DUF5305) Colicin_V PF02674.16 ORF34171 - 4.5 7.2 10.1 0.11 12.5 0.5 2.8 3 1 1 4 4 4 0 Colicin V production protein Chordopox_A33R PF05966.12 ORF32722 - 0.0031 16.8 0.1 0.0056 16.0 0.1 1.4 1 0 0 1 1 1 1 Chordopoxvirus A33R protein Peptidase_C1 PF00112.23 ORF29101 - 1.3e-65 221.6 7.0 2e-65 220.9 7.0 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF29101 - 2.9e-14 53.2 4.2 7.5e-14 51.9 4.2 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF29101 - 0.0063 15.3 3.3 0.064 12.0 0.2 2.8 3 0 0 3 3 3 2 Peptidase C1-like family Branch PF02485.21 ORF2226 - 0.028 13.9 0.3 0.057 12.9 0.3 1.5 1 0 0 1 1 1 0 Core-2/I-Branching enzyme YojJ PF10372.9 ORF2226 - 2.6 8.2 7.5 0.58 10.3 2.3 2.7 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus M-inducer_phosp PF06617.13 ORF21073 - 0.026 13.8 0.9 0.049 12.9 0.9 1.4 1 0 0 1 1 1 0 M-phase inducer phosphatase NUDIX PF00293.28 ORF20233 - 2.5e-06 27.6 0.0 5.1e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 NUDIX domain ABC2_membrane PF01061.24 ORF19478 - 2.5e-49 167.5 12.7 2.5e-49 167.5 12.7 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF19478 - 9.2e-12 44.7 18.1 7.2e-11 41.8 18.6 1.8 1 1 1 2 2 2 1 ABC-2 family transporter protein tRNA_anti-like PF12869.7 ORF17262 - 0.082 12.5 0.3 0.082 12.5 0.3 2.6 2 1 1 3 3 3 0 tRNA_anti-like HA2 PF04408.23 ORF16038 - 3.7e-19 69.0 0.1 1e-18 67.6 0.1 1.8 1 1 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 ORF16038 - 6.1e-18 65.0 0.0 1e-17 64.2 0.0 1.3 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Actin PF00022.19 ORF145251 - 1.4e-126 422.5 0.0 4.8e-126 420.6 0.0 1.7 1 1 0 1 1 1 1 Actin LptF_LptG PF03739.14 ORF133275 - 2.7e-61 207.4 5.0 3.1e-61 207.2 5.0 1.0 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG Peptidase_C1 PF00112.23 ORF129147 - 1.3e-65 221.6 7.0 2e-65 220.9 7.0 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF129147 - 2.9e-14 53.2 4.2 7.5e-14 51.9 4.2 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF129147 - 0.0063 15.3 3.3 0.064 12.0 0.2 2.8 3 0 0 3 3 3 2 Peptidase C1-like family Cytochrom_C1 PF02167.15 ORF120965 - 5.2e-47 160.4 0.1 6.8e-47 160.0 0.1 1.2 1 0 0 1 1 1 1 Cytochrome C1 family Cytochrome_CBB3 PF13442.6 ORF120965 - 0.0015 18.8 0.6 0.0038 17.5 0.1 2.0 2 0 0 2 2 2 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF120965 - 0.0064 17.6 0.2 0.049 14.8 0.0 2.4 2 0 0 2 2 2 1 Cytochrome c CLASP_N PF12348.8 ORF118660 - 2.9e-26 92.4 2.7 3.8e-26 92.1 2.7 1.1 1 0 0 1 1 1 1 CLASP N terminal Cnd1 PF12717.7 ORF118660 - 0.0035 17.4 3.1 0.02 14.9 2.3 2.4 1 1 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF118660 - 0.012 16.2 5.2 0.97 10.1 0.2 3.1 1 1 2 3 3 3 0 Vacuolar 14 Fab1-binding region Terminase_2 PF03592.16 ORF118660 - 0.17 12.4 2.2 0.23 11.9 0.4 2.2 2 1 0 2 2 2 0 Terminase small subunit Helicase_C PF00271.31 ORF116530 - 4.3e-27 94.7 0.0 7.9e-27 93.8 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF116530 - 0.00011 22.0 0.0 0.0036 17.1 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase Paz_1 PF18349.1 ORF115844 - 0.044 13.7 1.8 7.1 6.7 0.1 2.7 2 0 0 2 2 2 0 PAZ domain Peptidase_C1 PF00112.23 ORF115155 - 1.3e-65 221.6 7.0 2e-65 220.9 7.0 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF115155 - 2.9e-14 53.2 4.2 7.5e-14 51.9 4.2 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF115155 - 0.0063 15.3 3.3 0.064 12.0 0.2 2.8 3 0 0 3 3 3 2 Peptidase C1-like family Sulfotransfer_4 PF17784.1 ORF113062 - 0.037 13.9 0.1 4.4 7.1 0.0 2.2 2 0 0 2 2 2 0 Sulfotransferase domain Methyltransf_23 PF13489.6 ORF112926 - 0.016 15.0 0.0 0.042 13.7 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase domain His_Phos_1 PF00300.22 ORF105455 - 9.3e-14 51.6 0.1 1.3e-06 28.2 0.2 2.8 2 1 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) Ala_racemase_N PF01168.20 ORF102207 - 1.5e-70 237.2 0.0 2e-70 236.9 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Ala_racemase_C PF00842.21 ORF102207 - 5.8e-40 136.0 0.1 8.6e-40 135.4 0.1 1.3 1 0 0 1 1 1 1 Alanine racemase, C-terminal domain Peptidase_C1 PF00112.23 ORF99950 - 3.4e-42 145.0 4.3 4.8e-42 144.5 4.3 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF99950 - 9.7e-14 51.6 2.2 1.8e-13 50.7 2.2 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Epimerase PF01370.21 ORF90798 - 7.1e-21 74.8 0.0 1.4e-20 73.8 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF90798 - 3.7e-17 62.3 0.0 5.1e-17 61.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF90798 - 4.6e-17 62.4 0.0 6.6e-17 61.9 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF90798 - 1.9e-09 37.1 0.0 6.9e-09 35.3 0.0 1.7 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF90798 - 6e-07 28.9 0.1 1.2e-06 27.9 0.1 1.4 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF90798 - 5.9e-06 26.3 0.0 1.1e-05 25.4 0.0 1.4 2 0 0 2 2 2 1 NAD(P)H-binding KR PF08659.10 ORF90798 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.5 1 1 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 ORF90798 - 0.0051 16.0 0.0 0.0086 15.2 0.0 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain Sacchrp_dh_NADP PF03435.18 ORF90798 - 0.012 15.8 0.1 1.3 9.2 0.0 2.2 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain zf-C3HC4_3 PF13920.6 ORF8934 - 6.2e-07 29.2 9.6 1.1e-06 28.4 9.6 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF8934 - 6.6e-05 22.7 9.0 0.00013 21.8 9.0 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 ADD_ATRX PF17981.1 ORF8934 - 0.27 11.1 8.8 3.2 7.7 4.7 2.7 1 1 1 2 2 2 0 Cysteine Rich ADD domain DUF1771 PF08590.10 ORF8934 - 0.36 11.2 0.1 0.36 11.2 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1771) zf-RING_5 PF14634.6 ORF8934 - 0.68 10.0 11.4 1.4 8.9 11.4 1.5 1 0 0 1 1 1 0 zinc-RING finger domain DHHC PF01529.20 ORF85864 - 2.4e-34 118.3 10.5 2.4e-34 118.3 10.5 2.2 2 0 0 2 2 2 1 DHHC palmitoyltransferase Peptidase_C1 PF00112.23 ORF85227 - 7.7e-41 140.6 4.4 1.1e-40 140.1 4.4 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF85227 - 2.2e-14 53.6 6.8 2.2e-14 53.6 6.8 1.9 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Propeptide_C1 PF08127.13 ORF85227 - 0.001 18.9 0.8 0.003 17.4 0.8 1.7 1 0 0 1 1 1 1 Peptidase family C1 propeptide DUF1272 PF06906.11 ORF81117 - 0.011 15.8 3.8 0.026 14.6 3.8 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) Fungal_trans PF04082.18 ORF78274 - 2 7.4 9.4 0.045 12.8 1.3 2.2 2 1 0 2 2 2 0 Fungal specific transcription factor domain EamA PF00892.20 ORF76413 - 3.9e-16 59.5 35.4 3.5e-10 40.2 17.3 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF1206 PF06724.11 ORF76413 - 9.1 6.4 6.4 22 5.2 0.0 3.7 5 0 0 5 5 5 0 Domain of Unknown Function (DUF1206) Chitin_synth_2 PF03142.15 ORF70542 - 0.013 14.2 2.6 0.02 13.5 2.6 1.3 1 0 0 1 1 1 0 Chitin synthase ABC2_membrane_3 PF12698.7 ORF70542 - 3.8 6.5 25.0 4.2 6.4 1.0 3.0 2 1 1 3 3 3 0 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 ORF70542 - 9.7 5.4 22.3 1.9 7.7 0.8 2.3 2 0 0 2 2 2 0 ABC-2 family transporter protein Peptidase_C1 PF00112.23 ORF58829 - 3.4e-42 145.0 4.3 4.8e-42 144.5 4.3 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF58829 - 9.7e-14 51.6 2.2 1.8e-13 50.7 2.2 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Baculo_PEP_C PF04513.12 ORF55058 - 0.0072 16.4 7.6 1.2 9.1 0.4 3.3 2 1 1 3 3 3 3 Baculovirus polyhedron envelope protein, PEP, C terminus SMC_Nse1 PF07574.13 ORF55058 - 0.048 13.5 2.7 0.12 12.3 0.9 2.5 1 1 1 2 2 2 0 Nse1 non-SMC component of SMC5-6 complex RasGAP PF00616.19 ORF55058 - 1.1 8.9 12.0 0.65 9.7 8.2 2.4 1 1 1 2 2 2 0 GTPase-activator protein for Ras-like GTPase Exonuc_VII_L PF02601.15 ORF55058 - 2.9 7.4 13.4 1.2 8.6 4.3 2.1 1 1 0 2 2 2 0 Exonuclease VII, large subunit BLOC1_2 PF10046.9 ORF55058 - 9.4 6.6 17.8 9.4 6.6 6.0 4.2 2 2 3 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Pkinase PF00069.25 ORF50419 - 6e-65 219.2 0.9 7.8e-65 218.9 0.9 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF50419 - 1.9e-35 122.4 0.1 2.8e-35 121.9 0.1 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF50419 - 2.4e-07 30.3 0.1 3.8e-07 29.7 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF50419 - 4.3e-06 25.9 2.9 5.9e-06 25.5 2.9 1.4 1 1 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF50419 - 0.00066 19.3 0.9 0.0013 18.4 0.3 1.8 2 0 0 2 2 2 1 RIO1 family Kinase-like PF14531.6 ORF50419 - 0.0013 18.2 0.0 0.0029 17.0 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF50419 - 0.0033 16.3 0.1 0.0045 15.8 0.1 1.4 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 ORF50419 - 0.01 15.4 0.2 0.11 12.1 0.1 2.2 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 ORF50419 - 0.041 13.8 0.0 0.061 13.2 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family BTB PF00651.31 ORF4686 - 7.2e-16 58.4 0.6 2.4e-12 47.0 0.3 2.6 1 1 1 2 2 2 2 BTB/POZ domain BACK PF07707.15 ORF4686 - 0.079 13.1 2.2 0.43 10.7 0.0 2.9 2 1 1 3 3 3 0 BTB And C-terminal Kelch Importin_rep_4 PF18808.1 ORF4686 - 0.66 10.3 3.7 0.26 11.6 0.4 2.0 2 0 0 2 2 2 0 Importin repeat DUF4027 PF13219.6 ORF41222 - 0.12 12.2 1.1 0.19 11.6 0.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4027) STPPase_N PF16891.5 ORF34653 - 0.061 13.8 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain DUF4476 PF14771.6 ORF29322 - 0.24 11.7 10.5 0.28 11.5 0.1 3.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4476) DUF3447 PF11929.8 ORF29322 - 0.52 10.3 12.6 1.1 9.2 3.2 4.0 2 1 0 3 3 3 0 Domain of unknown function (DUF3447) Cation_ATPase_C PF00689.21 ORF23699 - 1.2e-51 175.0 2.8 1.7e-51 174.6 2.8 1.2 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF23699 - 1.9e-08 34.8 0.0 3.7e-08 33.9 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF23699 - 2.8e-05 24.0 0.3 4e-05 23.5 0.3 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Ldh_1_N PF00056.23 ORF18353 - 1.3e-33 116.0 0.0 2e-33 115.5 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF18353 - 1.1e-32 113.2 0.1 2.2e-32 112.3 0.0 1.5 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain RCC1 PF00415.18 ORF151873 - 3.5e-46 155.6 3.2 9.1e-11 42.2 0.0 6.3 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF151873 - 3.7e-31 106.2 8.9 1.2e-09 37.7 0.3 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat GAD-like PF08887.11 ORF151873 - 0.01 15.6 0.3 0.65 9.8 0.1 2.7 3 0 0 3 3 3 0 GAD-like domain Atypical_Card PF18461.1 ORF151645 - 0.024 14.8 1.6 0.34 11.1 0.1 2.7 3 0 0 3 3 3 0 Atypical caspase recruitment domain FSH1 PF03959.13 ORF140743 - 0.0059 16.3 0.0 0.0089 15.7 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S9 PF00326.21 ORF140743 - 0.044 13.3 0.0 0.075 12.5 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family GATase_3 PF07685.14 ORF138945 - 0.22 11.1 0.0 0.38 10.3 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Asp PF00026.23 ORF136113 - 4.8e-25 88.6 0.0 2.3e-24 86.4 0.0 1.8 1 1 0 1 1 1 1 Eukaryotic aspartyl protease DUF3556 PF12077.8 ORF129803 - 1.9e-28 99.3 0.3 2.4e-28 98.9 0.3 1.1 1 0 0 1 1 1 1 Transmembrane protein of unknown function (DUF3556) FtsX PF02687.21 ORF124745 - 1.3e-13 51.2 10.7 1.5e-12 47.8 6.2 2.4 2 0 0 2 2 2 2 FtsX-like permease family DUF3173 PF11372.8 ORF124745 - 0.032 14.1 0.1 0.082 12.8 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3173) PHO4 PF01384.20 ORF124745 - 0.063 12.3 0.1 0.062 12.3 0.1 1.2 1 0 0 1 1 1 0 Phosphate transporter family Peptidase_C1 PF00112.23 ORF124568 - 3.4e-42 145.0 4.3 4.8e-42 144.5 4.3 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF124568 - 9.7e-14 51.6 2.2 1.8e-13 50.7 2.2 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) adh_short PF00106.25 ORF123559 - 1.3e-48 165.1 0.0 1.7e-48 164.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF123559 - 9.8e-32 110.4 0.0 1.2e-31 110.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF123559 - 2.6e-11 43.7 0.0 3.9e-11 43.2 0.0 1.2 1 0 0 1 1 1 1 KR domain Shikimate_DH PF01488.20 ORF123559 - 0.0019 18.3 0.0 0.0047 17.0 0.0 1.6 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase THF_DHG_CYH_C PF02882.19 ORF123559 - 0.007 15.7 0.0 0.013 14.9 0.0 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F420_oxidored PF03807.17 ORF123559 - 0.036 14.7 0.0 0.073 13.7 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 ORF123559 - 0.041 13.5 0.0 0.069 12.8 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF1776 PF08643.10 ORF123559 - 0.055 12.8 0.0 10 5.4 0.0 2.2 2 0 0 2 2 2 0 Fungal family of unknown function (DUF1776) NAD_binding_7 PF13241.6 ORF123559 - 0.098 13.1 0.0 0.21 12.0 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 ORF123559 - 0.1 12.9 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 ORF123559 - 0.15 11.9 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding Pentapeptide_4 PF13599.6 ORF123146 - 0.0026 17.9 17.3 2.6 8.3 2.8 5.6 2 2 1 3 3 3 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF123146 - 0.026 14.7 21.0 4.7 7.5 0.2 6.4 5 2 0 5 5 5 0 Pentapeptide repeats (9 copies) Peptidase_C1 PF00112.23 ORF119084 - 3.4e-42 145.0 4.3 4.8e-42 144.5 4.3 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF119084 - 9.7e-14 51.6 2.2 1.8e-13 50.7 2.2 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) PARP PF00644.20 ORF118016 - 2.5e-20 72.9 0.1 6.2e-19 68.3 0.1 2.2 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Nrap_D5 PF17406.2 ORF117237 - 0.077 12.8 0.8 0.52 10.1 0.1 2.1 2 0 0 2 2 2 0 Nrap protein PAP/OAS1-like domain 5 HTH_53 PF18606.1 ORF117237 - 0.14 11.9 0.1 0.28 10.9 0.1 1.5 1 0 0 1 1 1 0 Zap helix turn helix N-terminal domain Cgr1 PF03879.14 ORF117237 - 7.3 7.0 15.1 25 5.3 5.2 2.5 1 1 1 2 2 2 0 Cgr1 family DHHC PF01529.20 ORF11681 - 2.4e-34 118.3 10.5 2.4e-34 118.3 10.5 2.2 2 0 0 2 2 2 1 DHHC palmitoyltransferase ACOX PF01756.19 ORF113301 - 2.4e-16 59.8 4.7 3.3e-16 59.4 2.2 2.3 2 1 0 2 2 2 1 Acyl-CoA oxidase PaO PF08417.12 ORF113301 - 0.13 12.5 0.0 0.3 11.3 0.0 1.6 1 0 0 1 1 1 0 Pheophorbide a oxygenase MIP-T3 PF10243.9 ORF113301 - 0.21 11.6 1.9 0.2 11.7 0.3 1.9 2 0 0 2 2 2 0 Microtubule-binding protein MIP-T3 CH-like domain Sugar_tr PF00083.24 ORF102953 - 5.6e-34 117.8 29.9 4.4e-23 81.9 3.8 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF102953 - 2.5e-30 105.6 55.2 3e-26 92.2 27.8 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF102953 - 1.6e-09 37.1 0.3 4.1e-06 25.9 0.0 3.2 1 1 0 2 2 2 2 MFS_1 like family MFS_2 PF13347.6 ORF102953 - 1.7e-07 30.2 28.5 2.1e-07 29.9 19.3 3.6 1 1 1 2 2 2 2 MFS/sugar transport protein adh_short PF00106.25 ORF100269 - 1.3e-48 165.1 0.0 1.7e-48 164.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF100269 - 9.7e-32 110.4 0.0 1.2e-31 110.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF100269 - 2.7e-11 43.7 0.0 3.9e-11 43.2 0.0 1.2 1 0 0 1 1 1 1 KR domain Shikimate_DH PF01488.20 ORF100269 - 0.0015 18.6 0.0 0.0039 17.2 0.0 1.6 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase THF_DHG_CYH_C PF02882.19 ORF100269 - 0.0053 16.1 0.0 0.0095 15.3 0.0 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F420_oxidored PF03807.17 ORF100269 - 0.035 14.7 0.0 0.073 13.7 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 ORF100269 - 0.041 13.5 0.0 0.069 12.8 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 ORF100269 - 0.043 14.2 0.0 0.094 13.2 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding DUF1776 PF08643.10 ORF100269 - 0.055 12.8 0.0 10 5.4 0.0 2.2 2 0 0 2 2 2 0 Fungal family of unknown function (DUF1776) Sacchrp_dh_NADP PF03435.18 ORF100269 - 0.1 12.9 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 ORF100269 - 0.15 11.9 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding p450 PF00067.22 NODE_17139_length_1070_cov_111.036715_g13050_i0reverse_frame_1 - 5.2e-38 131.0 0.3 7.2e-38 130.5 0.3 1.1 1 0 0 1 1 1 1 Cytochrome P450 GSH_synthase PF03199.15 NODE_17139_length_1070_cov_111.036715_g13050_i0reverse_frame_1 - 0.03 14.8 0.1 0.074 13.5 0.1 1.7 1 0 0 1 1 1 0 Eukaryotic glutathione synthase CHASE9 PF17153.4 NODE_17139_length_1070_cov_111.036715_g13050_i0reverse_frame_1 - 0.089 12.9 0.1 0.26 11.5 0.1 1.9 1 0 0 1 1 1 0 Periplasmic sensor domain, extracellular DUF3556 PF12077.8 NODE_17101_length_1071_cov_128.160232_g13020_i0reverse_frame_1 - 0.17 10.3 1.4 0.22 9.9 1.4 1.1 1 0 0 1 1 1 0 Transmembrane protein of unknown function (DUF3556) Dus PF01207.17 ORF93983 - 3.7e-69 233.2 0.0 4.4e-69 232.9 0.0 1.1 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 ORF93983 - 1.2e-05 24.9 0.0 1.9e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 ORF93983 - 0.0038 16.7 0.0 0.0078 15.6 0.0 1.5 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator FMN_dh PF01070.18 ORF93983 - 0.0059 15.7 0.0 0.011 14.8 0.0 1.4 1 1 0 1 1 1 1 FMN-dependent dehydrogenase ThiG PF05690.14 ORF93983 - 0.0072 15.7 0.0 0.011 15.0 0.0 1.2 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG IMPDH PF00478.25 ORF93983 - 0.008 15.2 0.0 0.012 14.7 0.0 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain TMP-TENI PF02581.17 ORF93983 - 0.06 12.7 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 Thiamine monophosphate synthase NMO PF03060.15 ORF93983 - 0.15 11.4 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 Nitronate monooxygenase DUF986 PF06173.12 ORF71084 - 0.048 13.7 0.5 0.099 12.7 0.5 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF986) Pox_EPC_I2-L1 PF12575.8 ORF71084 - 0.06 13.6 5.0 2.5 8.4 2.6 2.8 2 1 0 2 2 2 0 Poxvirus entry protein complex L1 and I2 Put_DNA-bind_N PF06971.13 ORF65945 - 0.069 13.2 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus EF-hand_1 PF00036.32 ORF6552 - 8.9e-21 71.8 4.1 3.7e-05 23.0 0.0 6.7 7 0 0 7 7 7 4 EF hand EF-hand_7 PF13499.6 ORF6552 - 5e-20 71.7 7.1 4.2e-08 33.5 0.1 4.7 3 2 2 5 5 5 5 EF-hand domain pair EF-hand_6 PF13405.6 ORF6552 - 1.8e-19 68.0 7.5 8.1e-05 22.3 0.0 6.7 7 0 0 7 7 7 5 EF-hand domain EF-hand_5 PF13202.6 ORF6552 - 3e-13 48.6 7.4 8.5e-06 25.0 0.0 5.5 7 0 0 7 7 7 2 EF hand EF-hand_8 PF13833.6 ORF6552 - 2.9e-11 43.0 6.4 0.0014 18.4 0.1 5.2 4 2 2 6 6 6 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF6552 - 0.0011 19.3 1.9 0.11 12.8 0.0 2.7 3 0 0 3 3 3 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 ORF6552 - 0.0017 19.2 0.1 0.85 10.5 0.0 3.1 4 0 0 4 4 4 1 EF-hand domain NLRC4_HD2 PF17776.1 ORF6552 - 0.014 15.9 0.1 0.039 14.5 0.1 1.7 1 0 0 1 1 1 0 NLRC4 helical domain HD2 KASH PF10541.9 ORF64034 - 0.64 10.3 3.7 0.56 10.5 0.9 2.3 2 0 0 2 2 2 0 Nuclear envelope localisation domain HPP PF04982.13 ORF63671 - 1.3e-62 209.4 23.9 1.8e-31 108.8 9.5 2.4 3 0 0 3 3 3 2 HPP family RELT PF12606.8 ORF63671 - 0.046 12.7 0.2 0.18 10.8 0.2 2.0 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Transgly_assoc PF04226.13 ORF63671 - 0.075 13.3 0.8 0.075 13.3 0.8 4.6 5 0 0 5 5 5 0 Transglycosylase associated protein Ank_2 PF12796.7 ORF60235 - 9.4e-47 157.5 11.6 3e-12 47.0 0.1 4.5 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF60235 - 6.6e-41 138.2 15.6 3.3e-10 40.3 0.2 5.6 3 1 3 7 7 7 6 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF60235 - 4.4e-37 125.7 12.0 1.1e-08 35.1 0.0 6.7 1 1 7 8 8 8 8 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF60235 - 2.4e-35 116.5 8.4 0.00036 20.7 0.0 8.5 8 0 0 8 8 8 8 Ankyrin repeat Ank PF00023.30 ORF60235 - 4.2e-34 115.5 21.9 5.7e-05 23.4 0.3 8.4 8 0 0 8 8 8 8 Ankyrin repeat DUF2384 PF09722.10 ORF60235 - 0.0081 16.2 0.1 30 4.7 0.0 4.1 4 0 0 4 4 4 0 Protein of unknown function (DUF2384) TRI9 PF08195.11 ORF53656 - 0.25 11.3 2.9 9.4 6.2 0.2 3.3 3 0 0 3 3 3 0 TRI9 protein Stc1 PF12898.7 ORF53656 - 2.6 8.6 6.7 3.2 8.4 0.1 3.4 3 1 0 3 3 3 0 Stc1 domain IncFII_repA PF02387.15 ORF5202 - 0.056 12.7 3.1 0.099 11.9 3.1 1.4 1 0 0 1 1 1 0 IncFII RepA protein family DUF778 PF05608.12 ORF5202 - 0.077 13.4 7.1 0.049 14.0 3.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF778) DivIC PF04977.15 ORF5202 - 0.3 10.9 7.0 0.17 11.6 1.4 2.6 2 0 0 2 2 2 0 Septum formation initiator WDCP PF15390.6 ORF5202 - 0.64 8.3 8.2 0.087 11.2 2.3 1.9 2 0 0 2 2 2 0 WD repeat and coiled-coil-containing protein family Trypan_PARP PF05887.11 ORF5202 - 1.6 8.7 7.6 2.8 7.9 7.6 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Multi-haem_cyto PF13447.6 ORF50740 - 0.28 10.4 5.5 0.57 9.4 5.5 1.4 1 0 0 1 1 1 0 Seven times multi-haem cytochrome CxxCH Spc29 PF17082.5 ORF48482 - 0.0029 17.5 2.2 0.55 10.0 0.4 2.2 2 0 0 2 2 2 2 Spindle Pole Component 29 Exonuc_VII_L PF02601.15 ORF48482 - 0.026 14.1 9.4 0.056 13.0 9.4 1.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit Med28 PF11594.8 ORF48482 - 0.037 14.1 1.8 0.58 10.2 0.3 2.1 1 1 1 2 2 2 0 Mediator complex subunit 28 DUF1664 PF07889.12 ORF48482 - 0.15 12.1 1.8 1.1 9.4 0.6 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) ISG65-75 PF11727.8 ORF48482 - 0.68 9.1 9.5 0.49 9.6 6.7 1.9 1 1 1 2 2 2 0 Invariant surface glycoprotein DUF948 PF06103.11 ORF48482 - 0.74 10.1 2.4 2 8.7 0.3 2.6 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) COG2 PF06148.11 ORF48482 - 0.88 9.7 10.4 2.8 8.1 3.3 2.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Prominin PF05478.11 ORF48482 - 1.4 6.7 3.7 3 5.7 3.7 1.4 1 1 0 1 1 1 0 Prominin Spc7 PF08317.11 ORF48482 - 2.1 7.1 13.4 0.69 8.7 5.0 2.0 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF3584 PF12128.8 ORF48482 - 6.4 4.2 17.2 25 2.2 17.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Ldh_2 PF02615.14 ORF47922 - 9.7e-95 317.5 0.0 1.1e-94 317.3 0.0 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase Ribonuc_red_sm PF00268.21 ORF44013 - 3.3e-45 154.7 0.0 4.5e-45 154.3 0.0 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain DUF2585 PF10755.9 ORF44013 - 0.013 15.3 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2585) MFS_1 PF07690.16 ORF41814 - 1.6e-07 30.6 5.3 1.6e-07 30.6 5.3 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily WD40 PF00400.32 ORF41020 - 0.00033 21.4 5.8 1.1 10.2 0.1 5.1 5 1 0 5 5 5 2 WD domain, G-beta repeat Cyclin_N PF00134.23 ORF30725 - 6.3e-10 38.9 4.3 3.4e-06 26.8 0.2 3.2 3 0 0 3 3 3 2 Cyclin, N-terminal domain Cyclin_C PF02984.19 ORF30725 - 9.9e-06 25.6 0.0 2.4e-05 24.4 0.0 1.7 1 0 0 1 1 1 1 Cyclin, C-terminal domain zf-CpG_bind_C PF12269.8 ORF30725 - 0.044 13.6 0.1 0.076 12.8 0.1 1.3 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain Patatin PF01734.22 ORF2930 - 2.3e-17 63.8 0.3 5.6e-17 62.6 0.3 1.6 1 1 0 1 1 1 1 Patatin-like phospholipase DLIC PF05783.11 ORF28744 - 6.6e-12 45.0 1.6 1.9e-11 43.5 0.2 2.0 1 1 1 2 2 2 1 Dynein light intermediate chain (DLIC) Roc PF08477.13 ORF28744 - 1.3e-09 38.4 0.1 3.8e-09 36.8 0.0 1.9 2 0 0 2 2 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF28744 - 3.3e-07 30.1 0.0 3e-06 26.9 0.1 2.2 2 0 0 2 2 2 1 Ras family Arf PF00025.21 ORF28744 - 1.6e-05 24.4 0.1 7.9e-05 22.2 0.1 2.1 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF28744 - 2.2e-05 24.5 1.1 5.9e-05 23.1 0.1 2.2 3 0 0 3 3 2 1 50S ribosome-binding GTPase AAA_22 PF13401.6 ORF28744 - 4.9e-05 23.6 0.0 0.00011 22.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF28744 - 6.3e-05 23.5 0.6 0.0002 21.9 0.1 2.0 2 0 0 2 2 2 1 ABC transporter AAA_29 PF13555.6 ORF28744 - 0.00021 20.9 0.0 0.00049 19.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF28744 - 0.00062 19.7 0.1 0.0042 17.0 0.1 2.3 2 0 0 2 2 2 1 RsgA GTPase AAA_15 PF13175.6 ORF28744 - 0.00066 19.5 2.1 0.0055 16.5 2.1 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 ORF28744 - 0.0016 18.9 0.3 0.0055 17.1 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain Ploopntkinase3 PF18751.1 ORF28744 - 0.0017 18.3 0.5 0.06 13.2 0.0 2.2 2 0 0 2 2 2 1 P-loop Nucleotide Kinase3 AAA_7 PF12775.7 ORF28744 - 0.003 17.1 0.1 0.0063 16.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region SMC_N PF02463.19 ORF28744 - 0.0052 16.3 2.9 0.044 13.2 0.0 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF28744 - 0.0056 17.2 6.9 0.049 14.1 0.1 2.5 2 0 0 2 2 2 1 AAA domain Septin PF00735.18 ORF28744 - 0.0058 16.0 0.1 0.0058 16.0 0.1 1.6 2 0 0 2 2 1 1 Septin NACHT PF05729.12 ORF28744 - 0.0084 16.0 0.1 0.048 13.6 0.0 2.2 2 0 0 2 2 2 1 NACHT domain Sigma54_activat PF00158.26 ORF28744 - 0.0091 15.7 0.6 0.019 14.7 0.2 1.7 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_24 PF13479.6 ORF28744 - 0.018 14.8 0.1 0.037 13.8 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF28744 - 0.022 14.8 0.0 0.052 13.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 ORF28744 - 0.036 13.8 0.2 0.085 12.6 0.2 1.8 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 ORF28744 - 0.046 13.1 0.1 0.046 13.1 0.1 2.7 2 1 1 3 3 3 0 Signal recognition particle receptor beta subunit CLP1_P PF16575.5 ORF28744 - 0.055 13.3 1.2 0.11 12.3 0.0 2.0 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_30 PF13604.6 ORF28744 - 0.056 13.2 0.1 0.13 12.0 0.1 1.6 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 ORF28744 - 0.062 12.6 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family Zeta_toxin PF06414.12 ORF28744 - 0.062 12.6 0.1 0.15 11.3 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_25 PF13481.6 ORF28744 - 0.074 12.6 0.0 0.24 11.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF28744 - 0.098 12.4 0.0 0.26 11.0 0.0 1.7 2 0 0 2 2 1 0 IstB-like ATP binding protein AAA_28 PF13521.6 ORF28744 - 0.17 12.2 0.2 0.5 10.6 0.1 1.9 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF28744 - 0.29 11.2 6.7 0.13 12.3 1.0 2.7 2 1 0 2 2 2 0 Helicase HerA, central domain GDPD PF03009.17 ORF26892 - 1.5e-32 113.4 0.3 2e-32 113.0 0.3 1.2 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family GDPD PF03009.17 ORF26659 - 1.5e-32 113.4 0.3 2e-32 113.0 0.3 1.2 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family DNA_methylase PF00145.17 ORF23654 - 0.05 12.9 0.0 0.47 9.7 0.0 2.1 2 0 0 2 2 2 0 C-5 cytosine-specific DNA methylase CCDC53 PF10152.9 ORF19838 - 6.2e-21 75.4 23.7 5.7e-16 59.3 23.7 3.7 1 1 0 1 1 1 1 Subunit CCDC53 of WASH complex NBP1 PF08537.10 ORF19838 - 1.9e-05 24.2 0.2 2.6e-05 23.8 0.2 1.1 1 0 0 1 1 1 1 Fungal Nap binding protein NBP1 NUC153 PF08159.12 ORF19838 - 0.38 10.6 0.1 0.38 10.6 0.1 1.8 2 0 0 2 2 2 0 NUC153 domain NPL4 PF05021.15 ORF18336 - 1.3e-36 126.6 2.3 7.8e-35 120.7 2.3 2.2 1 1 0 1 1 1 1 NPL4 family zf-NPL4 PF05020.15 ORF18336 - 2.1e-18 66.9 1.5 2.1e-18 66.9 1.5 1.7 2 0 0 2 2 2 1 NPL4 family, putative zinc binding region UAA PF08449.11 ORF146091 - 2.2e-36 125.6 21.7 2.7e-36 125.3 21.7 1.1 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF146091 - 7.4e-07 29.4 25.9 0.0028 17.8 13.7 3.1 1 1 2 3 3 3 2 EamA-like transporter family TPT PF03151.16 ORF146091 - 0.00082 18.8 16.1 0.0021 17.4 16.1 1.7 1 1 0 1 1 1 1 Triose-phosphate Transporter family Aldolase PF01081.19 ORF143691 - 7e-29 100.7 0.4 1e-28 100.1 0.4 1.2 1 0 0 1 1 1 1 KDPG and KHG aldolase TMP-TENI PF02581.17 ORF143691 - 0.0002 20.7 0.1 0.00073 18.9 0.1 2.0 1 1 1 2 2 2 1 Thiamine monophosphate synthase Amidase02_C PF12123.8 ORF141894 - 0.012 15.2 7.2 0.22 11.2 0.7 2.7 3 0 0 3 3 3 0 N-acetylmuramoyl-l-alanine amidase MgrB PF13998.6 ORF141894 - 0.051 13.5 1.5 11 6.1 0.1 2.4 2 0 0 2 2 2 0 MgrB protein Dioxygenase_N PF04444.14 ORF141894 - 0.26 11.2 0.8 11 6.0 0.2 2.3 2 0 0 2 2 2 0 Catechol dioxygenase N terminus EF-hand_6 PF13405.6 ORF128789 - 4.1e-10 38.8 2.1 0.0002 21.0 0.0 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF128789 - 1.8e-07 30.2 0.3 0.002 17.5 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF128789 - 4.2e-07 30.3 0.3 7.6e-07 29.5 0.3 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF128789 - 4.6e-05 22.7 0.1 0.4 10.3 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF128789 - 0.00074 19.3 0.0 0.0014 18.4 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF12822 - 4.1e-10 38.8 2.1 0.0002 21.0 0.0 2.8 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF12822 - 1.8e-07 30.2 0.3 0.002 17.5 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF12822 - 4.2e-07 30.3 0.3 7.6e-07 29.5 0.3 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF12822 - 4.6e-05 22.7 0.1 0.4 10.3 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF12822 - 0.00074 19.3 0.0 0.0014 18.4 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain pair HEAT PF02985.22 ORF127732 - 7.8e-28 94.2 2.8 0.00096 19.2 0.1 7.4 7 0 0 7 7 7 6 HEAT repeat HEAT_2 PF13646.6 ORF127732 - 1.8e-19 69.9 0.1 9.6e-07 29.1 0.1 4.8 2 1 4 6 6 6 6 HEAT repeats Cnd1 PF12717.7 ORF127732 - 1.3e-12 48.1 0.3 0.0012 18.9 0.0 3.2 1 1 1 3 3 3 3 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF127732 - 4.7e-08 33.5 0.7 0.024 15.2 0.0 4.1 3 1 0 3 3 3 2 Vacuolar 14 Fab1-binding region Cnd3 PF12719.7 ORF127732 - 2.6e-06 26.9 1.7 2e-05 23.9 0.4 2.2 1 1 1 2 2 2 1 Nuclear condensing complex subunits, C-term domain Cohesin_HEAT PF12765.7 ORF127732 - 5.7e-06 26.5 0.0 0.084 13.2 0.0 4.4 4 0 0 4 4 4 1 HEAT repeat associated with sister chromatid cohesion RTP1_C1 PF10363.9 ORF127732 - 6e-06 26.4 0.1 0.0024 18.0 0.1 3.4 2 2 1 3 3 3 1 Required for nuclear transport of RNA pol II C-terminus 1 Adaptin_N PF01602.20 ORF127732 - 0.00023 19.9 1.5 0.0023 16.6 0.1 2.3 1 1 2 3 3 3 2 Adaptin N terminal region HEAT_EZ PF13513.6 ORF127732 - 0.00056 20.3 0.3 0.93 10.1 0.0 4.1 4 0 0 4 4 4 1 HEAT-like repeat Arm PF00514.23 ORF127732 - 0.047 13.7 0.4 4.6 7.4 0.0 3.5 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat Pkinase PF00069.25 ORF113708 - 1e-44 152.9 3.6 1.6e-21 76.9 0.0 2.4 3 0 0 3 3 3 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF113708 - 1e-20 74.1 0.1 6.4e-12 45.3 0.0 2.2 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF113708 - 1.5e-07 31.1 1.0 0.00024 20.5 0.0 2.8 1 1 1 3 3 3 2 Kinase-like Kdo PF06293.14 ORF113708 - 0.00047 19.6 0.1 0.00084 18.7 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF113708 - 0.0014 17.7 0.3 0.0026 16.7 0.3 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 ORF113708 - 0.012 14.7 0.1 0.024 13.7 0.1 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 Peptidase_M15_2 PF05951.13 ORF113708 - 0.021 14.5 0.3 0.17 11.5 0.1 2.3 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF882) APH PF01636.23 ORF113708 - 0.029 14.3 0.0 0.048 13.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF113708 - 0.036 12.8 0.3 0.063 12.0 0.3 1.3 1 0 0 1 1 1 0 Fungal protein kinase Pox_ser-thr_kin PF05445.11 ORF113708 - 0.073 12.0 6.2 0.89 8.4 0.4 2.6 2 1 0 2 2 2 0 Poxvirus serine/threonine protein kinase Kinesin PF00225.23 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_1 - 3.3e-32 111.8 1.0 4.3e-32 111.4 0.1 1.6 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_1 - 1.6e-14 54.1 1.4 1.9e-14 53.9 0.0 1.8 2 0 0 2 2 2 1 Microtubule binding GCIP PF13324.6 NODE_17139_length_1070_cov_111.036715_g13050_i0reverse_frame_2 - 0.055 13.1 0.1 0.096 12.3 0.1 1.4 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting Lactamase_B_3 PF13483.6 ORF96921 - 1.9e-15 57.2 0.1 2.5e-15 56.8 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 ORF96921 - 8.9e-13 48.2 0.3 1.2e-12 47.8 0.3 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 ORF96921 - 0.03 14.3 1.8 0.082 12.9 1.5 1.8 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily DUF179 PF02622.15 ORF90505 - 5.2e-19 68.8 0.0 1.1e-18 67.7 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 Antimicrobial12 PF08107.11 ORF90505 - 0.057 13.2 0.0 0.16 11.7 0.0 1.7 1 0 0 1 1 1 0 Pleurocidin family Peptidase_A22B PF04258.13 ORF89605 - 7.3e-67 225.9 22.0 1.1e-66 225.3 22.0 1.2 1 0 0 1 1 1 1 Signal peptide peptidase DUF1664 PF07889.12 ORF89605 - 0.1 12.6 0.6 0.31 11.1 0.6 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF2768 PF10966.8 ORF89605 - 0.11 12.9 0.5 0.11 12.9 0.5 4.4 4 1 0 5 5 5 0 Protein of unknown function (DUF2768) zf-CCCH_4 PF18044.1 ORF85596 - 2.3e-05 24.1 0.8 2.3e-05 24.1 0.8 1.7 2 0 0 2 2 2 1 CCCH-type zinc finger zf-CCCH PF00642.24 ORF85596 - 2.4e-05 24.1 1.7 3.8e-05 23.5 1.7 1.3 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF85596 - 0.00017 21.5 5.2 0.0003 20.7 5.2 1.4 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 ORF85596 - 0.0059 17.3 0.1 0.012 16.3 0.1 1.5 1 0 0 1 1 1 1 Torus domain zf-CCCH_2 PF14608.6 ORF85596 - 0.017 15.6 0.5 0.027 14.9 0.5 1.3 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Glycolytic PF00274.19 ORF79057 - 4.6e-159 528.8 0.0 5.1e-159 528.6 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Ion_trans PF00520.31 ORF77670 - 2.4e-09 36.8 0.5 3.4e-09 36.3 0.5 1.2 1 0 0 1 1 1 1 Ion transport protein DUF3368 PF11848.8 ORF77670 - 0.028 14.2 0.2 0.39 10.5 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3368) Spc24 PF08286.11 ORF77670 - 0.1 12.8 6.3 0.27 11.5 0.7 2.3 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 HisKA_3 PF07730.13 ORF77670 - 1.1 9.8 3.2 5.4 7.6 0.4 2.6 3 0 0 3 3 3 0 Histidine kinase WD40 PF00400.32 ORF76681 - 8.5e-14 51.7 0.2 0.0095 16.8 0.0 4.5 4 0 0 4 4 4 3 WD domain, G-beta repeat Nup160 PF11715.8 ORF76681 - 0.22 10.1 0.0 0.63 8.6 0.0 1.4 1 1 0 1 1 1 0 Nucleoporin Nup120/160 Thioredoxin PF00085.20 ORF75003 - 1.3e-36 124.7 0.1 7.3e-30 103.0 0.1 3.0 3 0 0 3 3 3 2 Thioredoxin OST3_OST6 PF04756.13 ORF75003 - 1.6e-07 31.0 0.1 5.6e-07 29.2 0.0 1.9 2 1 0 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_6 PF13848.6 ORF75003 - 3.9e-07 30.2 0.1 0.076 12.9 0.0 3.1 3 0 0 3 3 3 2 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF75003 - 1.3e-06 28.8 0.4 0.089 13.2 0.3 3.9 3 1 0 3 3 3 2 Thioredoxin-like domain Thioredoxin_3 PF13192.6 ORF75003 - 0.0014 18.7 0.0 0.0037 17.3 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_7 PF13899.6 ORF75003 - 0.007 16.5 0.1 0.021 15.0 0.1 1.8 1 0 0 1 1 1 1 Thioredoxin-like TraF PF13728.6 ORF75003 - 0.015 15.1 0.0 0.19 11.5 0.0 2.1 2 0 0 2 2 2 0 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 ORF75003 - 0.049 14.0 0.1 6 7.3 0.1 3.1 2 1 1 3 3 3 0 Thioredoxin-like DUF1685 PF07939.11 ORF75003 - 0.081 12.7 0.3 1 9.2 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1685) Ion_trans PF00520.31 ORF73044 - 7.1e-22 77.8 13.6 1e-21 77.3 13.6 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF73044 - 3.2e-10 39.8 6.3 3.2e-10 39.8 6.3 2.1 2 0 0 2 2 2 1 Ion channel EF-hand_1 PF00036.32 ORF73044 - 4.5e-09 35.2 7.5 0.00051 19.4 0.1 2.8 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF73044 - 1.7e-08 33.7 7.2 0.00087 19.0 3.9 2.9 2 1 1 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF73044 - 1.1e-07 31.5 8.6 0.00059 19.6 0.1 3.0 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_7 PF13499.6 ORF73044 - 1.1e-07 32.1 3.6 7.3e-07 29.6 3.6 2.1 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF73044 - 4.5e-06 25.9 4.8 0.067 12.7 1.8 2.9 3 0 0 3 3 3 2 EF hand EF-hand_4 PF12763.7 ORF73044 - 0.16 12.0 3.5 6.4 6.8 0.0 2.8 2 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand RsgA_GTPase PF03193.16 ORF72741 - 0.0045 16.9 0.0 0.008 16.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase Rad17 PF03215.15 ORF72741 - 0.0098 15.8 0.1 0.025 14.5 0.0 1.6 2 0 0 2 2 2 1 Rad17 P-loop domain Zeta_toxin PF06414.12 ORF72741 - 0.024 13.9 0.0 3 7.1 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 ORF72741 - 0.039 14.1 0.1 0.12 12.6 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF72741 - 0.054 13.0 0.0 0.087 12.3 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region SRP54 PF00448.22 ORF72741 - 0.068 12.8 0.1 0.59 9.7 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_5 PF07728.14 ORF72741 - 0.072 13.1 0.0 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 ORF72741 - 0.082 12.6 0.5 0.25 11.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 ORF72741 - 0.14 11.3 0.2 3.9 6.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) MORN PF02493.20 ORF68898 - 1.5e-16 59.2 18.2 0.00017 21.3 0.4 6.8 6 0 0 6 6 6 6 MORN repeat DUF202 PF02656.15 ORF66950 - 1.6e-10 41.3 1.4 1.6e-10 41.3 1.4 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF202) LysE PF01810.18 ORF66950 - 0.097 12.1 2.8 0.088 12.3 1.1 1.8 2 0 0 2 2 2 0 LysE type translocator DPM3 PF08285.11 ORF66950 - 0.25 11.5 1.3 3.3 8.0 1.3 2.6 1 1 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Ank_2 PF12796.7 ORF66714 - 4.4e-14 52.8 4.0 1.8e-10 41.2 0.3 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF66714 - 4.1e-13 48.2 5.5 1.7e-05 24.8 0.4 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF66714 - 2.6e-12 47.0 2.1 1.1e-07 32.3 0.6 2.6 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF66714 - 3.5e-12 46.3 3.7 8.4e-07 29.2 0.9 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF66714 - 4.4e-10 39.6 5.1 0.0094 16.4 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeat DUF826 PF05696.11 ORF66714 - 0.037 14.1 0.1 1 9.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF826) Ammonium_transp PF00909.21 ORF65145 - 1.7e-82 277.2 20.9 1.9e-82 277.1 20.9 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Glycolytic PF00274.19 ORF58963 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Imm30 PF15565.6 ORF49700 - 0.0045 17.0 0.2 0.015 15.3 0.2 2.0 1 0 0 1 1 1 1 Immunity protein 30 TRAP-gamma PF07074.12 ORF4524 - 0.14 11.7 5.5 2.2 7.8 0.8 2.5 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DUF3139 PF11337.8 ORF4524 - 0.24 12.1 7.9 1.6 9.5 0.0 3.2 3 1 0 3 3 3 0 Protein of unknown function (DUF3139) Fez1 PF06818.15 ORF44668 - 0.0002 21.9 23.7 0.13 12.6 0.6 3.6 1 1 3 4 4 4 3 Fez1 DivIC PF04977.15 ORF44668 - 0.014 15.1 27.3 0.13 12.1 1.0 5.9 4 2 2 6 6 6 0 Septum formation initiator DUF4618 PF15397.6 ORF44668 - 0.038 13.4 0.3 0.038 13.4 0.3 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4618) ALS2CR11 PF15729.5 ORF44668 - 0.21 10.7 3.8 0.35 9.9 3.8 1.2 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 candidate 11 DUF641 PF04859.12 ORF44668 - 0.25 11.7 14.6 0.72 10.2 1.2 3.7 3 2 0 3 3 3 0 Plant protein of unknown function (DUF641) Cnn_1N PF07989.11 ORF44668 - 0.81 9.9 21.7 0.64 10.2 0.7 4.5 3 2 1 4 4 4 0 Centrosomin N-terminal motif 1 V_ATPase_I PF01496.19 ORF44668 - 0.95 7.3 11.9 1.5 6.6 5.5 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Sec2p PF06428.11 ORF44668 - 2.2 8.3 19.8 3 7.9 0.5 4.6 4 1 0 5 5 5 0 GDP/GTP exchange factor Sec2p APG6_N PF17675.1 ORF44668 - 4.1 7.9 32.0 2 8.9 5.6 3.9 1 1 2 3 3 3 0 Apg6 coiled-coil region PUB PF09409.10 ORF42507 - 1.4e-09 37.8 0.0 2.9e-09 36.7 0.0 1.5 1 0 0 1 1 1 1 PUB domain DUF4050 PF13259.6 ORF42507 - 0.75 10.1 6.7 1.2 9.5 6.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4050) NPR3 PF03666.13 ORF42507 - 4 6.1 8.8 5.1 5.8 8.8 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 ORF42507 - 5.7 5.6 13.2 7.5 5.2 13.2 1.1 1 0 0 1 1 1 0 Presenilin HemY_N PF07219.13 ORF42507 - 7.1 6.9 9.3 16 5.8 9.3 1.6 1 0 0 1 1 1 0 HemY protein N-terminus RR_TM4-6 PF06459.12 ORF42507 - 10 5.9 14.6 15 5.3 14.6 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 ADH_zinc_N PF00107.26 ORF41187 - 4.8e-11 42.8 0.0 1.6e-10 41.1 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF41187 - 2.1e-05 25.6 0.0 0.00022 22.3 0.0 2.2 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF41187 - 0.00032 20.6 0.2 0.0024 17.8 0.0 2.5 3 1 1 4 4 4 1 Alcohol dehydrogenase GroES-like domain Glycolytic PF00274.19 ORF39438 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I ADH_zinc_N PF00107.26 ORF2980 - 4.8e-11 42.8 0.0 1.6e-10 41.1 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF2980 - 2.1e-05 25.6 0.0 0.00022 22.3 0.0 2.2 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF2980 - 0.00032 20.6 0.2 0.0024 17.8 0.0 2.5 3 1 1 4 4 4 1 Alcohol dehydrogenase GroES-like domain WD40 PF00400.32 ORF17954 - 6.7e-22 77.4 4.8 0.00016 22.4 0.1 6.2 5 1 1 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF17954 - 2.9e-20 72.4 0.0 3.9e-05 23.8 0.0 5.5 3 1 3 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF17954 - 2.8e-05 23.6 0.7 6.3 6.0 0.0 4.6 4 1 0 4 4 4 3 WD40-like domain PQQ PF01011.21 ORF17954 - 0.00097 19.0 2.5 0.092 12.7 0.2 4.4 5 0 0 5 5 5 1 PQQ enzyme repeat Ge1_WD40 PF16529.5 ORF17954 - 0.00099 18.2 0.0 6.4 5.6 0.0 3.9 3 1 1 4 4 4 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Cytochrom_D1 PF02239.16 ORF17954 - 0.012 14.1 0.0 0.022 13.3 0.0 1.4 1 0 0 1 1 1 0 Cytochrome D1 heme domain BBS2_Mid PF14783.6 ORF17954 - 0.019 15.0 0.2 5.2 7.1 0.0 4.0 5 0 0 5 5 5 0 Ciliary BBSome complex subunit 2, middle region Nup160 PF11715.8 ORF17954 - 0.21 10.2 0.0 24 3.4 0.0 2.9 3 0 0 3 3 3 0 Nucleoporin Nup120/160 RCC1_2 PF13540.6 ORF16645 - 4.3e-14 51.9 29.8 0.079 12.8 0.1 9.2 9 0 0 9 9 9 6 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF16645 - 2.6e-07 30.9 6.2 3.3 8.1 0.0 7.5 1 1 7 8 8 8 1 TFIIH p62 subunit, N-terminal domain Spectrin PF00435.21 ORF16645 - 9.3e-06 26.1 0.4 40 4.8 0.0 6.2 6 2 2 8 8 8 0 Spectrin repeat zinc_ribbon_13 PF09855.9 ORF16645 - 0.0007 19.7 3.1 55 4.0 0.0 5.8 7 0 0 7 7 7 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) WAK_assoc PF14380.6 ORF16645 - 0.038 14.7 0.1 21 5.9 0.0 4.5 3 2 3 6 6 6 0 Wall-associated receptor kinase C-terminal Methyltransf_29 PF03141.16 ORF16645 - 0.04 12.5 3.9 39 2.6 0.0 4.9 3 1 1 5 5 5 0 Putative S-adenosyl-L-methionine-dependent methyltransferase GST_C_2 PF13410.6 ORF16645 - 0.045 13.8 1.5 39 4.4 0.1 4.1 4 1 0 4 4 4 0 Glutathione S-transferase, C-terminal domain Glyco_tranf_2_3 PF13641.6 ORF16645 - 0.079 12.8 2.2 15 5.4 0.1 3.2 3 1 1 4 4 4 0 Glycosyltransferase like family 2 WD40 PF00400.32 ORF15939 - 8.2e-06 26.5 0.3 0.15 13.0 0.0 4.0 4 0 0 4 4 4 2 WD domain, G-beta repeat RAB3GAP2_N PF14655.6 ORF15939 - 0.028 13.7 0.0 0.041 13.1 0.0 1.2 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit N-terminus Trypan_PARP PF05887.11 ORF152743 - 1.8 8.5 72.5 0.33 10.9 35.5 2.6 2 1 1 3 3 3 0 Procyclic acidic repetitive protein (PARP) TonB_N PF16031.5 ORF152743 - 1.9 9.0 51.1 7.6 7.1 51.1 1.7 1 1 0 1 1 1 0 TonB polyproline region Ribosomal_S3_C PF00189.20 ORF152081 - 0.17 12.4 0.0 0.25 11.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain DUF179 PF02622.15 ORF151922 - 5.2e-19 68.8 0.0 1.1e-18 67.7 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 Antimicrobial12 PF08107.11 ORF151922 - 0.057 13.2 0.0 0.16 11.7 0.0 1.7 1 0 0 1 1 1 0 Pleurocidin family UQ_con PF00179.26 ORF151112 - 2.8e-14 53.0 0.0 4.7e-14 52.2 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RRM_1 PF00076.22 ORF150311 - 3.4e-16 58.8 0.0 5.4e-16 58.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KH_1 PF00013.29 ORF150311 - 0.0045 16.8 0.1 0.0094 15.8 0.1 1.5 1 0 0 1 1 1 1 KH domain zf-CCCH PF00642.24 ORF150311 - 0.0059 16.5 1.3 0.0098 15.8 1.3 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) BDV_P10 PF06515.11 ORF150311 - 0.14 12.2 2.8 6.3 6.9 0.6 2.4 1 1 1 2 2 2 0 Borna disease virus P10 protein Glycolytic PF00274.19 ORF149673 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Glycolytic PF00274.19 ORF147295 - 1e-158 527.6 0.0 1.1e-158 527.5 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Dickkopf_N PF04706.12 ORF145663 - 0.0057 17.1 10.9 0.0057 17.1 10.9 4.2 3 1 1 4 4 4 1 Dickkopf N-terminal cysteine-rich region PIG-Y PF15159.6 ORF145663 - 5.2 8.1 6.8 52 4.9 2.7 2.5 2 0 0 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y EamA PF00892.20 ORF143046 - 1.2e-10 41.7 32.6 2.3e-08 34.3 10.7 2.3 2 0 0 2 2 2 2 EamA-like transporter family Phage_holin_5_2 PF16079.5 ORF143046 - 0.054 13.8 0.5 0.054 13.8 0.5 4.3 3 1 1 4 4 4 0 Phage holin family Hol44, in holin superfamily V Pribosyltran PF00156.27 ORF140348 - 5.6e-08 32.5 0.0 9.8e-08 31.7 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain hnRNP_Q_AcD PF18360.1 ORF140348 - 0.022 14.7 0.1 0.052 13.5 0.1 1.6 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain PRTase_2 PF15609.6 ORF140348 - 0.12 11.9 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase TILa PF12714.7 ORF140348 - 4.1 7.4 13.0 3.2 7.8 10.3 2.2 1 1 1 2 2 2 0 TILa domain TMEM154 PF15102.6 ORF137285 - 0.013 15.4 0.2 0.025 14.5 0.2 1.4 1 0 0 1 1 1 0 TMEM154 protein family Glycolytic PF00274.19 ORF13711 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Aa_trans PF01490.18 ORF136456 - 7.8e-49 166.5 23.2 9.5e-49 166.2 23.2 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Epimerase PF01370.21 ORF136352 - 1.4e-22 80.3 0.1 5.4e-22 78.4 0.1 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF136352 - 2.5e-19 69.4 0.0 3.3e-19 68.9 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF136352 - 7.6e-17 61.7 0.0 1.1e-16 61.2 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 ORF136352 - 3.4e-10 39.6 0.0 5.2e-09 35.6 0.0 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF136352 - 6.2e-10 39.3 0.0 1e-09 38.5 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 ORF136352 - 9.6e-10 38.1 0.0 1.4e-09 37.5 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein RmlD_sub_bind PF04321.17 ORF136352 - 8.8e-07 28.3 0.1 1.3e-06 27.7 0.1 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain KR PF08659.10 ORF136352 - 5.6e-06 26.4 0.0 9.4e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 KR domain NmrA PF05368.13 ORF136352 - 0.00054 19.6 0.0 0.0064 16.1 0.0 2.1 2 0 0 2 2 2 1 NmrA-like family adh_short PF00106.25 ORF136352 - 0.01 15.3 0.0 0.017 14.5 0.0 1.5 1 1 0 1 1 1 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF136352 - 0.011 16.0 0.0 0.08 13.2 0.0 2.1 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Glycolytic PF00274.19 ORF134541 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Glycolytic PF00274.19 ORF131264 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Ribosomal_S3_C PF00189.20 ORF131154 - 0.17 12.4 0.0 0.25 11.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain Ank_2 PF12796.7 ORF129031 - 4.4e-14 52.8 4.0 1.8e-10 41.2 0.3 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF129031 - 4.1e-13 48.2 5.5 1.7e-05 24.8 0.4 3.7 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 ORF129031 - 2.6e-12 47.0 2.1 1.1e-07 32.3 0.6 2.6 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF129031 - 3.5e-12 46.3 3.7 8.4e-07 29.2 0.9 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF129031 - 4.4e-10 39.6 5.1 0.0094 16.4 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeat DUF826 PF05696.11 ORF129031 - 0.037 14.1 0.1 1 9.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF826) AA_permease_2 PF13520.6 ORF126387 - 1.5e-18 66.9 39.4 1.8e-18 66.6 39.4 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF126387 - 4.7e-09 35.4 34.4 7.7e-09 34.7 34.4 1.3 1 1 0 1 1 1 1 Amino acid permease Glycolytic PF00274.19 ORF112479 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Ribosomal_S3_C PF00189.20 ORF108887 - 0.17 12.4 0.0 0.25 11.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain sCache_3_2 PF17203.4 ORF108241 - 7.6e-22 78.0 0.3 1.9e-21 76.6 0.0 1.8 2 0 0 2 2 2 1 Single cache domain 3 SPOB_a PF14689.6 ORF108241 - 9.2e-08 31.7 1.7 2.3e-07 30.4 1.7 1.7 1 0 0 1 1 1 1 Sensor_kinase_SpoOB-type, alpha-helical domain PAS_4 PF08448.10 ORF108241 - 5.2e-06 26.7 0.0 0.0093 16.2 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.7 ORF108241 - 5.3e-06 26.6 0.0 0.0028 17.9 0.0 2.5 2 0 0 2 2 2 2 PAS domain PAS PF00989.25 ORF108241 - 3.3e-05 23.8 0.0 0.00011 22.2 0.0 1.9 2 0 0 2 2 2 1 PAS fold dCache_1 PF02743.18 ORF108241 - 0.00065 19.6 0.9 0.0039 17.0 0.1 2.4 2 1 1 3 3 3 1 Cache domain PAS_8 PF13188.7 ORF108241 - 0.00091 19.2 0.0 0.0031 17.5 0.0 1.9 2 0 0 2 2 2 1 PAS domain dCache_3 PF14827.6 ORF108241 - 0.0016 18.2 1.8 0.0047 16.6 0.1 2.5 2 1 0 2 2 2 1 Double sensory domain of two-component sensor kinase sCache_3_3 PF17202.4 ORF108241 - 0.012 16.1 0.0 0.032 14.7 0.0 1.7 1 0 0 1 1 1 0 Single cache domain 3 HemY_N PF07219.13 ORF108241 - 0.016 15.4 2.0 0.086 13.0 0.1 2.3 2 0 0 2 2 2 0 HemY protein N-terminus Cache_3-Cache_2 PF17201.4 ORF108241 - 0.02 14.1 0.0 0.088 12.1 0.0 2.0 2 1 1 3 3 3 0 Cache 3/Cache 2 fusion domain CBS PF00571.28 ORF108241 - 0.13 12.7 0.1 0.32 11.5 0.1 1.7 1 0 0 1 1 1 0 CBS domain Ribosomal_S3_C PF00189.20 ORF107093 - 0.17 12.4 0.0 0.25 11.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain RANK_CRD_2 PF18278.1 ORF106859 - 0.0065 16.6 0.4 0.018 15.2 0.4 1.8 1 0 0 1 1 1 1 Receptor activator of the NF-KB cysteine-rich repeat domain 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks45.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks45.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks45.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks45.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:05 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF5533 PF17685.1 NODE_87571_length_183_cov_2.108108_g79630_i0forward_frame_3 - 0.15 12.4 1.5 0.17 12.3 1.5 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5533) gag_pre-integrs PF13976.6 NODE_87569_length_183_cov_2.128378_g79628_i0reverse_frame_3 - 0.15 12.0 0.1 0.17 11.8 0.1 1.1 1 0 0 1 1 1 0 GAG-pre-integrase domain DUF3258 PF11646.8 NODE_87564_length_183_cov_2.148649_g79623_i0reverse_frame_3 - 0.041 14.0 0.1 0.041 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF3258 Rhabdo_M1 PF03342.13 NODE_87564_length_183_cov_2.148649_g79623_i0reverse_frame_3 - 0.074 12.4 0.1 0.074 12.4 0.1 1.0 1 0 0 1 1 1 0 Rhabdovirus M1 matrix protein (M1 polymerase-associated protein) Spectrin_like PF18373.1 NODE_87562_length_183_cov_2.155405_g79621_i0reverse_frame_2 - 0.045 13.8 0.0 0.055 13.5 0.0 1.1 1 0 0 1 1 1 0 Spectrin like domain Rad60-SLD_2 PF13881.6 NODE_87561_length_183_cov_2.155405_g79620_i0forward_frame_2 - 0.089 12.9 0.2 0.099 12.7 0.2 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like CCDC14 PF15254.6 NODE_87559_length_183_cov_2.162162_g79618_i0reverse_frame_3 - 0.03 13.0 3.7 0.035 12.8 3.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 YojJ PF10372.9 NODE_87559_length_183_cov_2.162162_g79618_i0reverse_frame_3 - 0.76 9.9 7.4 2.8 8.1 1.8 2.1 1 1 1 2 2 2 0 Bacterial membrane-spanning protein N-terminus zinc_ribbon_10 PF10058.9 NODE_87557_length_183_cov_2.162162_g79616_i0reverse_frame_3 - 0.0045 16.7 0.1 0.0048 16.6 0.1 1.1 1 0 0 1 1 1 1 Predicted integral membrane zinc-ribbon metal-binding protein PHD_2 PF13831.6 NODE_87557_length_183_cov_2.162162_g79616_i0reverse_frame_3 - 0.057 13.0 0.6 0.057 13.0 0.6 1.5 2 0 0 2 2 2 0 PHD-finger DUF2069 PF09842.9 NODE_87557_length_183_cov_2.162162_g79616_i0forward_frame_2 - 0.15 12.3 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2069) DUF281 PF03436.13 NODE_87555_length_183_cov_2.168919_g79614_i0reverse_frame_3 - 0.025 15.0 2.3 0.03 14.7 2.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF281) PET10 PF17316.2 NODE_87555_length_183_cov_2.168919_g79614_i0reverse_frame_2 - 0.21 11.1 0.0 0.21 11.1 0.0 1.0 1 0 0 1 1 1 0 Petite colonies protein 10 YozD PF14162.6 NODE_87553_length_183_cov_2.236486_g79612_i0forward_frame_2 - 0.2 12.0 0.0 0.26 11.6 0.0 1.1 1 0 0 1 1 1 0 YozD-like protein His_biosynth PF00977.21 NODE_87550_length_183_cov_2.290541_g79609_i0forward_frame_3 - 2e-11 43.8 0.0 2.1e-11 43.7 0.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Gal_Lectin PF02140.18 NODE_87544_length_183_cov_2.371622_g79603_i0reverse_frame_2 - 0.0099 16.3 0.3 0.011 16.2 0.3 1.0 1 0 0 1 1 1 1 Galactose binding lectin domain Ph1570 PF09638.10 NODE_87544_length_183_cov_2.371622_g79603_i0reverse_frame_2 - 0.05 13.5 0.1 0.057 13.3 0.1 1.1 1 0 0 1 1 1 0 Ph1570 protein SLR1-BP PF07333.12 NODE_87543_length_183_cov_2.378378_g79602_i0reverse_frame_3 - 0.027 14.9 2.0 0.035 14.5 2.0 1.2 1 0 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) DUF2518 PF10726.9 NODE_87541_length_183_cov_2.398649_g79600_i0reverse_frame_3 - 0.71 9.5 4.1 0.8 9.4 4.1 1.0 1 0 0 1 1 1 0 Protein of function (DUF2518) SLATT_5 PF18160.1 NODE_87541_length_183_cov_2.398649_g79600_i0reverse_frame_3 - 9.3 5.5 8.2 11 5.3 8.2 1.1 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 zf-P11 PF03854.14 NODE_87541_length_183_cov_2.398649_g79600_i0forward_frame_2 - 0.14 11.8 4.6 0.23 11.1 4.6 1.5 1 1 0 1 1 1 0 P-11 zinc finger Syncollin PF15138.6 NODE_87537_length_183_cov_2.439189_g79596_i0reverse_frame_3 - 0.0041 17.3 0.7 0.0047 17.1 0.7 1.2 1 0 0 1 1 1 1 Syncollin CAP_N PF01213.19 NODE_87535_length_183_cov_2.459459_g79594_i0reverse_frame_2 - 0.1 12.1 9.8 0.096 12.2 9.8 1.1 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal VIR_N PF15912.5 NODE_87535_length_183_cov_2.459459_g79594_i0reverse_frame_2 - 0.24 10.9 3.7 0.23 11.0 3.7 1.0 1 0 0 1 1 1 0 Virilizer, N-terminal Mito_fiss_reg PF05308.11 NODE_87535_length_183_cov_2.459459_g79594_i0reverse_frame_2 - 0.28 11.3 6.1 0.29 11.2 6.1 1.0 1 0 0 1 1 1 0 Mitochondrial fission regulator PRIMA1 PF16101.5 NODE_87535_length_183_cov_2.459459_g79594_i0reverse_frame_2 - 0.3 11.1 7.7 0.31 11.1 7.7 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Sec16_C PF12931.7 NODE_87524_length_183_cov_2.641892_g79583_i0forward_frame_3 - 0.2 11.2 0.0 0.2 11.2 0.0 1.0 1 0 0 1 1 1 0 Sec23-binding domain of Sec16 MlaC PF05494.12 NODE_87524_length_183_cov_2.641892_g79583_i0forward_frame_2 - 0.22 11.3 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 MlaC protein DUF2975 PF11188.8 NODE_87523_length_183_cov_2.695946_g79582_i0forward_frame_3 - 0.089 12.7 1.7 0.087 12.7 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) TGase_elicitor PF16683.5 NODE_87521_length_183_cov_2.722973_g79580_i0reverse_frame_2 - 0.021 13.6 0.9 0.023 13.5 0.9 1.0 1 0 0 1 1 1 0 Transglutaminase elicitor amfpi-1 PF12190.8 NODE_87521_length_183_cov_2.722973_g79580_i0forward_frame_2 - 0.0021 18.7 5.2 0.0021 18.6 5.2 1.1 1 0 0 1 1 1 1 Fungal protease inhibitor POM121 PF15229.6 NODE_87519_length_183_cov_2.743243_g79578_i0reverse_frame_2 - 0.055 13.1 1.4 0.054 13.1 1.4 1.1 1 0 0 1 1 1 0 POM121 family BLF1 PF17752.1 NODE_87518_length_183_cov_2.783784_g79577_i0reverse_frame_3 - 0.067 12.5 0.1 0.072 12.4 0.1 1.0 1 0 0 1 1 1 0 Burkholderia lethal factor 1 Response_reg PF00072.24 NODE_87518_length_183_cov_2.783784_g79577_i0forward_frame_3 - 0.01 16.0 0.0 0.017 15.3 0.0 1.4 2 0 0 2 2 2 0 Response regulator receiver domain DUF1640 PF07798.11 NODE_87511_length_183_cov_3.101351_g79570_i0reverse_frame_2 - 0.035 14.1 0.1 0.04 14.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DUF4482 PF14818.6 NODE_87511_length_183_cov_3.101351_g79570_i0reverse_frame_2 - 0.093 13.6 0.0 0.1 13.4 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4482) ATP-synt_E_2 PF08112.11 NODE_87511_length_183_cov_3.101351_g79570_i0reverse_frame_2 - 0.14 12.4 1.9 1.6 9.1 0.1 2.2 1 1 1 2 2 2 0 ATP synthase epsilon subunit Csm1_B PF18211.1 NODE_87507_length_183_cov_3.236486_g79566_i0reverse_frame_2 - 0.05 13.4 0.0 0.053 13.4 0.0 1.1 1 0 0 1 1 1 0 Csm1 subunit domain B Cript PF10235.9 NODE_87502_length_183_cov_3.635135_g79561_i0reverse_frame_3 - 0.05 14.2 2.0 0.057 14.0 2.0 1.1 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT zf-B_box PF00643.24 NODE_87502_length_183_cov_3.635135_g79561_i0reverse_frame_3 - 0.33 11.1 8.0 0.89 9.8 8.0 1.6 1 1 0 1 1 1 0 B-box zinc finger DUF997 PF06196.12 NODE_87500_length_183_cov_3.729730_g79559_i0reverse_frame_3 - 0.12 12.4 1.1 0.19 11.8 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF997) DUF2205 PF10224.9 NODE_87500_length_183_cov_3.729730_g79559_i0forward_frame_3 - 0.006 16.6 0.4 0.0075 16.2 0.4 1.1 1 0 0 1 1 1 1 Short coiled-coil protein YabA PF06156.13 NODE_87500_length_183_cov_3.729730_g79559_i0forward_frame_3 - 0.026 15.2 0.1 0.032 14.9 0.1 1.2 1 0 0 1 1 1 0 Initiation control protein YabA Fer4_24 PF18109.1 NODE_87500_length_183_cov_3.729730_g79559_i0forward_frame_3 - 0.061 13.6 0.1 0.099 12.9 0.1 1.3 1 0 0 1 1 1 0 Ferredoxin I 4Fe-4S cluster domain LAX PF15681.5 NODE_87492_length_183_cov_8.472973_g79551_i0reverse_frame_2 - 0.15 10.8 0.6 0.16 10.7 0.6 1.0 1 0 0 1 1 1 0 Lymphocyte activation family X Man-6-P_recep PF02157.15 NODE_87486_length_183_cov_12.513514_g79545_i0reverse_frame_3 - 0.052 12.6 0.3 0.055 12.6 0.3 1.0 1 0 0 1 1 1 0 Mannose-6-phosphate receptor HEPN_Toprim_N PF18871.1 NODE_87486_length_183_cov_12.513514_g79545_i0forward_frame_2 - 0.01 15.8 0.5 0.011 15.7 0.5 1.0 1 0 0 1 1 1 0 HEPN/Toprim N-terminal domain 1 Toxin_28 PF08115.11 NODE_87485_length_183_cov_17.148649_g79544_i0forward_frame_3 - 0.083 12.8 4.1 0.12 12.2 4.1 1.2 1 0 0 1 1 1 0 SFI toxin family DUF1983 PF09327.11 NODE_87484_length_183_cov_17.418919_g79543_i0reverse_frame_2 - 0.1 12.7 0.0 0.12 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1983) GCSF PF16647.5 NODE_87482_length_183_cov_19.391892_g79541_i0reverse_frame_3 - 0.075 12.9 0.1 0.09 12.6 0.1 1.1 1 0 0 1 1 1 0 Granulocyte colony-stimulating factor UL20 PF17582.2 NODE_87481_length_183_cov_20.547297_g79540_i0reverse_frame_2 - 0.1 11.9 0.4 0.097 11.9 0.4 1.0 1 0 0 1 1 1 0 Cytomegalovirus UL20 Ribosomal_S18 PF01084.20 NODE_87477_length_183_cov_22.878378_g79536_i0reverse_frame_3 - 0.068 13.4 0.0 0.093 13.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S18 EFhand_Ca_insen PF08726.10 NODE_87477_length_183_cov_22.878378_g79536_i0forward_frame_2 - 0.013 15.6 0.0 0.017 15.2 0.0 1.1 1 0 0 1 1 1 0 Ca2+ insensitive EF hand DUF3884 PF13024.6 NODE_87476_length_183_cov_23.222973_g79535_i0reverse_frame_3 - 0.053 13.1 0.0 0.067 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3884) zf_C2HC_14 PF18574.1 NODE_87476_length_183_cov_23.222973_g79535_i0reverse_frame_2 - 0.034 13.9 0.0 0.034 13.9 0.0 2.0 3 0 0 3 3 3 0 C2HC Zing finger domain RNA_polI_A34 PF08208.11 NODE_87475_length_183_cov_23.310811_g79534_i0reverse_frame_2 - 1.4 9.0 13.0 1.6 8.8 13.0 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Vps62 PF06101.11 NODE_87466_length_183_cov_29.993243_g79525_i0reverse_frame_3 - 0.039 12.2 0.2 0.039 12.3 0.2 1.0 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 62 MAT1-1-2 PF17043.5 NODE_87466_length_183_cov_29.993243_g79525_i0reverse_frame_2 - 0.045 13.6 0.3 0.047 13.5 0.3 1.1 1 0 0 1 1 1 0 Mating type protein 1-1-2 of unknown function TMEM100 PF16311.5 NODE_87465_length_183_cov_30.831081_g79524_i0reverse_frame_2 - 0.21 11.2 1.5 0.29 10.7 1.5 1.2 1 0 0 1 1 1 0 Transmembrane protein 100 PUMA PF15826.5 NODE_87461_length_183_cov_32.878378_g79520_i0reverse_frame_3 - 0.39 10.9 3.2 0.42 10.8 3.2 1.0 1 0 0 1 1 1 0 Bcl-2-binding component 3, p53 upregulated modulator of apoptosis Enterotoxin_ST PF02048.16 NODE_87461_length_183_cov_32.878378_g79520_i0forward_frame_2 - 7 7.2 12.8 1.6 9.3 9.5 1.7 2 0 0 2 2 2 0 Heat-stable enterotoxin ST HopA1 PF17914.1 NODE_87459_length_183_cov_34.195946_g79518_i0forward_frame_2 - 0.16 11.7 0.1 0.18 11.6 0.1 1.0 1 0 0 1 1 1 0 HopA1 effector protein family Myticin-prepro PF10690.9 NODE_87452_length_183_cov_36.425676_g79511_i0forward_frame_3 - 1.1 9.6 5.3 1.1 9.5 5.3 1.2 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel Ribosomal_S19e PF01090.19 NODE_87451_length_183_cov_37.168919_g79510_i0reverse_frame_2 - 0.026 14.2 0.1 0.027 14.2 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein S19e DUF697 PF05128.12 NODE_87451_length_183_cov_37.168919_g79510_i0reverse_frame_2 - 0.13 12.0 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF697) Selenoprotein_S PF06936.11 NODE_87451_length_183_cov_37.168919_g79510_i0forward_frame_3 - 0.1 12.4 0.1 0.12 12.2 0.1 1.0 1 0 0 1 1 1 0 Selenoprotein S (SelS) NR_Repeat PF14046.6 NODE_87443_length_183_cov_42.878378_g79502_i0reverse_frame_3 - 0.01 15.9 0.8 0.012 15.7 0.8 1.2 1 0 0 1 1 1 0 Nuclear receptor repeat Phage_P2_GpE PF06528.12 NODE_87438_length_183_cov_47.614865_g79497_i0reverse_frame_2 - 0.23 11.0 0.6 0.34 10.5 0.6 1.2 1 0 0 1 1 1 0 Phage P2 GpE Pex2_Pex12 PF04757.14 NODE_87438_length_183_cov_47.614865_g79497_i0forward_frame_3 - 0.25 10.9 1.4 0.25 10.9 1.4 1.1 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region Paf1 PF03985.13 NODE_87436_length_183_cov_48.641892_g79495_i0reverse_frame_2 - 0.09 11.8 0.1 0.096 11.7 0.1 1.0 1 0 0 1 1 1 0 Paf1 Chordopox_A30L PF06015.12 NODE_87434_length_183_cov_52.851351_g79493_i0reverse_frame_2 - 0.0078 16.0 2.6 0.14 12.0 0.1 2.1 1 1 1 2 2 2 2 Chordopoxvirus A30L protein DUF3481 PF11980.8 NODE_87434_length_183_cov_52.851351_g79493_i0forward_frame_3 - 0.32 10.7 1.6 0.4 10.4 1.6 1.1 1 0 0 1 1 1 0 C-terminal domain of neuropilin glycoprotein Inhibitor_I36 PF03995.13 NODE_87430_length_183_cov_54.277027_g79489_i0forward_frame_3 - 0.077 12.9 1.1 0.088 12.7 1.1 1.1 1 0 0 1 1 1 0 Peptidase inhibitor family I36 Op_neuropeptide PF08035.11 NODE_87427_length_183_cov_55.317568_g79486_i0reverse_frame_2 - 0.039 13.8 0.1 0.06 13.2 0.1 1.3 1 0 0 1 1 1 0 Opioids neuropeptide YBD PF17725.1 NODE_87423_length_183_cov_63.256757_g79482_i0forward_frame_2 - 0.068 13.0 0.5 0.07 13.0 0.5 1.0 1 0 0 1 1 1 0 YAP binding domain Nmad4 PF18756.1 NODE_87421_length_183_cov_63.547297_g79480_i0forward_frame_3 - 0.17 12.2 0.0 0.19 12.1 0.0 1.0 1 0 0 1 1 1 0 Nucleotide modification associated domain 4 DUF2628 PF10947.8 NODE_87421_length_183_cov_63.547297_g79480_i0forward_frame_2 - 0.029 14.7 0.3 0.029 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) Ashwin PF15323.6 NODE_87419_length_183_cov_75.689189_g79478_i0reverse_frame_3 - 0.0053 16.8 0.0 0.0054 16.8 0.0 1.1 1 0 0 1 1 1 1 Developmental protein UPF0506 PF11703.8 NODE_87416_length_183_cov_82.824324_g79475_i0reverse_frame_2 - 0.014 15.7 4.8 0.018 15.4 4.8 1.2 1 0 0 1 1 1 0 UPF0506 HTH_Tnp_IS1 PF12759.7 NODE_87416_length_183_cov_82.824324_g79475_i0forward_frame_2 - 0.047 13.3 0.0 0.079 12.6 0.0 1.3 1 0 0 1 1 1 0 InsA C-terminal domain DUF5133 PF17196.4 NODE_87413_length_183_cov_98.966216_g79472_i0reverse_frame_2 - 0.098 12.9 1.0 0.28 11.4 0.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF5133) NACHT PF05729.12 NODE_87407_length_183_cov_116.837838_g79466_i0forward_frame_2 - 0.17 11.8 0.4 0.19 11.6 0.4 1.0 1 0 0 1 1 1 0 NACHT domain VDE PF07137.11 NODE_87402_length_183_cov_166.864865_g79461_i0reverse_frame_3 - 0.061 12.9 0.1 0.063 12.8 0.1 1.0 1 0 0 1 1 1 0 VDE lipocalin domain Peptidase_C3G PF12381.8 NODE_87402_length_183_cov_166.864865_g79461_i0reverse_frame_3 - 0.088 12.3 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 Tungro spherical virus-type peptidase Dehyd-heme_bind PF09098.10 NODE_87402_length_183_cov_166.864865_g79461_i0forward_frame_3 - 0.016 14.8 1.8 0.017 14.7 1.8 1.1 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding Kazal_1 PF00050.21 NODE_87400_length_183_cov_172.817568_g79459_i0reverse_frame_3 - 0.33 11.0 5.3 0.74 9.9 1.1 2.4 1 1 1 2 2 2 0 Kazal-type serine protease inhibitor domain Defensin_beta PF00711.19 NODE_87393_length_183_cov_348.648649_g79452_i0forward_frame_3 - 0.028 14.5 2.8 0.029 14.4 1.0 1.9 3 0 0 3 3 3 0 Beta defensin zf-CDGSH PF09360.10 NODE_87392_length_183_cov_370.087838_g79451_i0forward_frame_3 - 0.038 14.2 0.1 0.061 13.6 0.1 1.5 1 0 0 1 1 1 0 Iron-binding zinc finger CDGSH type Arginosuc_synth PF00764.19 NODE_87390_length_183_cov_556.837838_g79449_i0reverse_frame_2 - 0.23 10.7 0.0 0.27 10.5 0.0 1.0 1 0 0 1 1 1 0 Arginosuccinate synthase GPR_Gpa2_C PF11970.8 NODE_87388_length_183_cov_1592.716216_g79447_i0forward_frame_3 - 0.054 13.6 2.5 0.064 13.3 2.5 1.2 1 0 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 C-term Ribosomal_L31e PF01198.19 NODE_87387_length_183_cov_1794.587838_g79446_i0reverse_frame_3 - 1.9e-09 37.6 0.4 2.7e-09 37.1 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L31e DUF3464 PF11947.8 NODE_87386_length_183_cov_4590.047297_g79445_i0reverse_frame_3 - 1.2 8.9 5.5 1.3 8.8 5.5 1.1 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Pex24p PF06398.11 NODE_87386_length_183_cov_4590.047297_g79445_i0forward_frame_2 - 1.9 7.4 4.5 2.1 7.2 4.5 1.0 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin AA_permease_C PF13906.6 ORF99133 - 0.012 15.6 0.6 0.017 15.2 0.6 1.2 1 0 0 1 1 1 0 C-terminus of AA_permease ECF_trnsprt PF12822.7 ORF99133 - 0.048 13.8 0.9 0.061 13.4 0.9 1.0 1 0 0 1 1 1 0 ECF transporter, substrate-specific component FAS_N PF17828.1 ORF98371 - 0.075 13.0 0.0 0.083 12.9 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta UL2 PF08196.11 ORF97871 - 0.029 14.3 0.5 0.046 13.7 0.3 1.4 1 1 0 1 1 1 0 UL2 protein Yop-YscD_ppl PF16693.5 ORF97868 - 0.05 13.0 0.5 0.05 13.0 0.5 1.0 1 0 0 1 1 1 0 Inner membrane component of T3SS, periplasmic domain Apyrase PF06079.11 ORF97758 - 0.038 13.2 0.1 0.039 13.2 0.1 1.0 1 0 0 1 1 1 0 Apyrase Gp58 PF07902.11 ORF97758 - 0.088 11.1 1.9 0.097 10.9 1.9 1.0 1 0 0 1 1 1 0 gp58-like protein muHD PF10291.9 ORF97604 - 0.12 11.8 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 Muniscin C-terminal mu homology domain TRA-1_regulated PF02343.16 ORF96975 - 0.023 14.8 0.3 0.025 14.6 0.3 1.1 1 0 0 1 1 1 0 TRA-1 regulated protein R03H10.4 DUF3094 PF11293.8 ORF96540 - 0.046 13.4 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) MTHFR_C PF12225.8 ORF96464 - 0.12 12.1 1.9 0.12 12.0 1.9 1.2 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal Churchill PF06573.11 ORF96424 - 0.1 12.9 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Churchill protein zf-C3HC4_2 PF13923.6 ORF96335 - 2.4e-05 24.1 5.2 3.4e-05 23.6 5.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF96335 - 3e-05 24.2 2.4 3.3e-05 24.1 2.4 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF96335 - 3.6e-05 24.0 3.8 4.7e-05 23.6 3.8 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF96335 - 0.011 15.5 9.2 0.011 15.5 9.2 1.5 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) MTCP1 PF08991.10 ORF95747 - 0.35 11.1 7.9 0.15 12.3 4.2 1.8 1 1 1 2 2 2 0 Mature-T-Cell Proliferation I type DUF1289 PF06945.13 ORF95510 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) 2-oxogl_dehyd_N PF16078.5 ORF95106 - 0.14 11.8 0.1 0.83 9.3 0.0 1.9 2 0 0 2 2 2 0 2-oxoglutarate dehydrogenase N-terminus AA_permease_C PF13906.6 ORF95008 - 0.012 15.6 0.6 0.017 15.2 0.6 1.2 1 0 0 1 1 1 0 C-terminus of AA_permease ECF_trnsprt PF12822.7 ORF95008 - 0.048 13.8 0.9 0.061 13.4 0.9 1.0 1 0 0 1 1 1 0 ECF transporter, substrate-specific component DUF4024 PF13216.6 ORF94607 - 0.28 11.1 3.3 0.65 10.0 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4024) PRIMA1 PF16101.5 ORF93823 - 0.0061 16.6 1.5 0.0062 16.6 1.5 1.0 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 Neuropeptide_S PF14993.6 ORF93610 - 0.038 13.8 0.0 0.048 13.5 0.0 1.2 1 0 0 1 1 1 0 Neuropeptide S precursor protein DUF641 PF04859.12 ORF9350 - 0.078 13.3 5.3 0.081 13.3 5.3 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) FAM76 PF16046.5 ORF9350 - 0.25 10.7 5.8 0.25 10.7 5.8 1.0 1 0 0 1 1 1 0 FAM76 protein Cytochrom_B559 PF00283.19 ORF92853 - 0.18 11.3 3.1 0.28 10.6 3.1 1.3 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits zf-MYST PF17772.1 ORF92825 - 0.011 15.4 0.1 4.1 7.1 0.0 2.1 2 0 0 2 2 2 0 MYST family zinc finger domain DUF1289 PF06945.13 ORF92332 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) FUSC PF04632.12 ORF92246 - 0.041 12.4 4.2 0.043 12.4 4.2 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF4131 PF13567.6 ORF92246 - 2 8.1 6.7 2.2 7.9 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) Chorion_1 PF01723.16 ORF92141 - 0.025 14.5 0.7 0.028 14.4 0.7 1.1 1 0 0 1 1 1 0 Chorion protein Toxin_12 PF07740.12 ORF91833 - 0.11 13.3 2.0 0.11 13.3 2.0 2.5 3 0 0 3 3 3 0 Ion channel inhibitory toxin DUF1289 PF06945.13 ORF91542 - 0.068 13.0 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) Glyco_hydro_42C PF08533.10 ORF91519 - 0.028 14.1 0.6 0.044 13.5 0.6 1.3 1 0 0 1 1 1 0 Beta-galactosidase C-terminal domain YtpI PF14007.6 ORF91219 - 0.016 15.3 0.8 0.018 15.2 0.8 1.2 1 0 0 1 1 1 0 YtpI-like protein Cytochrom_NNT PF03264.14 ORF91219 - 0.18 11.5 1.1 0.21 11.3 1.1 1.1 1 0 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region Autoind_synth PF00765.17 ORF91043 - 0.16 11.5 0.1 0.18 11.4 0.1 1.1 1 0 0 1 1 1 0 Autoinducer synthase DUF5388 PF17363.2 ORF90205 - 0.026 14.7 0.0 0.029 14.6 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5388) DUF3285 PF11688.8 ORF90023 - 0.08 12.9 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3285) Gyro_capsid PF04162.12 ORF89964 - 1.6 7.1 6.1 1.7 7.0 6.1 1.0 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) Baculo_LEF-2 PF03041.14 ORF89477 - 0.0046 16.6 0.1 0.0053 16.4 0.1 1.0 1 0 0 1 1 1 1 lef-2 DUF5403 PF17395.2 ORF89070 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) DUF5403 PF17395.2 ORF89067 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) PPIP5K2_N PF18086.1 ORF88930 - 0.073 13.2 0.1 0.082 13.1 0.1 1.1 1 0 0 1 1 1 0 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain Prion_bPrPp PF11587.8 ORF88617 - 0.0069 16.2 0.4 0.013 15.3 0.4 1.5 1 1 0 1 1 1 1 Major prion protein bPrPp - N terminal SVM_signal PF12113.8 ORF88279 - 0.99 9.4 7.0 0.16 11.9 2.6 1.8 2 0 0 2 2 2 0 SVM protein signal sequence DUF1289 PF06945.13 ORF88174 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) Torsin PF06309.11 ORF87870 - 0.18 11.9 0.0 0.18 11.9 0.0 1.3 1 1 0 1 1 1 0 Torsin HDA2-3 PF11496.8 ORF87761 - 0.23 10.6 0.0 0.23 10.6 0.0 1.0 1 0 0 1 1 1 0 Class II histone deacetylase complex subunits 2 and 3 Cons_hypoth698 PF03601.14 ORF87670 - 0.021 13.7 0.9 0.02 13.8 0.9 1.0 1 0 0 1 1 1 0 Conserved hypothetical protein 698 zf-C2H2_4 PF13894.6 ORF86971 - 0.0031 18.2 1.0 0.0047 17.7 1.0 1.3 1 0 0 1 1 1 1 C2H2-type zinc finger zf-3CxxC PF13695.6 ORF86971 - 0.012 16.0 0.2 0.015 15.8 0.2 1.1 1 0 0 1 1 1 0 Zinc-binding domain Rad50_zn_hook PF04423.14 ORF86971 - 0.018 14.8 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 Rad50 zinc hook motif zf_UBZ PF18439.1 ORF86971 - 0.032 13.8 0.3 0.05 13.2 0.3 1.3 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf-RING_4 PF14570.6 ORF86971 - 0.044 13.6 0.0 0.067 13.0 0.0 1.3 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-H2C2_2 PF13465.6 ORF86971 - 0.061 13.8 0.4 0.097 13.1 0.1 1.5 2 0 0 2 2 2 0 Zinc-finger double domain PhnI PF05861.12 ORF85960 - 0.019 13.8 0.1 0.02 13.8 0.1 1.0 1 0 0 1 1 1 0 Bacterial phosphonate metabolism protein (PhnI) Phage_int_SAM_3 PF14659.6 ORF85960 - 0.044 14.1 3.1 0.044 14.1 3.1 1.5 1 1 0 1 1 1 0 Phage integrase, N-terminal SAM-like domain DUF4452 PF14618.6 ORF85759 - 0.032 14.1 0.1 0.032 14.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4452) CAS_CSE1 PF03378.15 ORF85361 - 0.14 10.6 1.5 0.15 10.5 1.5 1.0 1 0 0 1 1 1 0 CAS/CSE protein, C-terminus CTV_P13 PF06922.11 ORF85221 - 0.062 13.4 0.2 0.063 13.4 0.2 1.1 1 0 0 1 1 1 0 Citrus tristeza virus P13 protein AP3D1 PF06375.11 ORF83991 - 4.5 7.5 16.0 4.8 7.4 16.0 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 LRV_FeS PF05484.11 ORF83265 - 0.057 13.4 1.5 0.057 13.4 1.5 1.9 2 0 0 2 2 2 0 LRV protein FeS4 cluster zf_CCCH_4 PF18345.1 ORF83265 - 0.18 11.9 7.0 0.4 10.8 0.5 3.0 3 0 0 3 3 3 0 Zinc finger domain TetR_C_20 PF17925.1 ORF82993 - 0.033 14.5 0.0 0.042 14.2 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Stn1 PF10451.9 ORF82914 - 0.14 11.0 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 Telomere regulation protein Stn1 DUF1289 PF06945.13 ORF82892 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) zf-H2C2_5 PF13909.6 ORF82873 - 0.071 12.9 0.1 0.13 12.0 0.1 1.4 1 0 0 1 1 1 0 C2H2-type zinc-finger domain DUF1265 PF06887.14 ORF82855 - 0.1 12.6 0.2 0.15 12.1 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1265) NST1 PF13945.6 ORF82789 - 0.19 11.8 0.7 0.21 11.7 0.7 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator DUF5408 PF17402.2 ORF80772 - 0.12 12.2 0.1 0.16 11.8 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5408) DUF5426 PF17473.2 ORF80614 - 0.015 15.6 0.6 0.018 15.3 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5426) DUF1338 PF07063.13 ORF80487 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) DUF1289 PF06945.13 ORF80375 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) Nudix_N PF12535.8 ORF80076 - 0.15 11.7 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Hydrolase of X-linked nucleoside diphosphate N terminal zf_PR_Knuckle PF18445.1 ORF80008 - 0.058 13.2 0.1 0.08 12.8 0.1 1.2 1 0 0 1 1 1 0 PR zinc knuckle motif Aim19 PF10315.9 ORF79851 - 0.03 14.6 0.0 0.032 14.5 0.0 1.1 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 19 Fmp27_WPPW PF10359.9 ORF79544 - 0.0046 15.9 0.4 0.0048 15.8 0.4 1.0 1 0 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain BLOC1_2 PF10046.9 ORF79544 - 0.0077 16.5 0.2 0.0084 16.4 0.2 1.0 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 ApoC-I PF04691.12 ORF79544 - 0.0097 15.8 0.2 0.017 15.1 0.1 1.5 1 1 0 1 1 1 1 Apolipoprotein C-I (ApoC-1) EzrA PF06160.12 ORF79544 - 0.027 12.7 0.2 0.032 12.4 0.2 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Noelin-1 PF12308.8 ORF79544 - 0.035 14.1 0.1 0.037 14.0 0.1 1.1 1 0 0 1 1 1 0 Neurogenesis glycoprotein CLZ PF16526.5 ORF79544 - 0.045 14.1 0.2 0.44 10.9 0.1 1.9 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF948 PF06103.11 ORF79544 - 0.051 13.8 0.1 0.06 13.6 0.1 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF16 PF01519.16 ORF79544 - 0.058 13.9 0.1 0.069 13.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 DUF5344 PF17279.2 ORF79544 - 0.063 13.9 0.2 0.077 13.6 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5344) Holin_BhlA PF10960.8 ORF79544 - 0.099 12.6 0.7 0.25 11.3 0.7 1.8 1 1 0 1 1 1 0 BhlA holin family DUF3094 PF11293.8 ORF79401 - 0.046 13.4 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) DnaJ_C PF01556.18 ORF79275 - 0.078 13.1 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 DnaJ C terminal domain Sigma_reg_N PF13800.6 ORF79090 - 0.003 17.8 1.9 0.0033 17.7 1.9 1.1 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF5385 PF17359.2 ORF79090 - 0.54 9.8 1.0 0.62 9.6 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Prion PF00377.18 ORF78303 - 0.15 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Prion/Doppel alpha-helical domain YpmT PF17431.2 ORF78099 - 0.027 14.5 1.5 0.035 14.1 1.5 1.1 1 0 0 1 1 1 0 Uncharacterized YmpT-like DUF4878 PF12870.7 ORF78015 - 0.071 13.4 0.0 0.076 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4878) PCEMA1 PF07418.11 ORF77913 - 1.8 8.0 4.0 2 7.9 4.0 1.1 1 0 0 1 1 1 0 Acidic phosphoprotein precursor PCEMA1 COP23 PF14218.6 ORF77679 - 0.07 12.9 0.1 0.07 12.9 0.1 1.2 1 0 0 1 1 1 0 Circadian oscillating protein COP23 zf-CCCH_2 PF14608.6 ORF77507 - 0.021 15.3 1.0 0.021 15.3 1.0 2.5 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger DUF1338 PF07063.13 ORF77305 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) CTC1_2 PF15491.6 ORF77166 - 0.25 10.6 1.5 2.5 7.3 0.3 2.0 1 1 1 2 2 2 0 CST, telomere maintenance, complex subunit CTC1 Tna_leader PF08053.11 ORF77129 - 8.4 6.6 7.7 1.6 8.9 0.7 3.0 3 0 0 3 3 3 0 Tryptophanase operon leader peptide DUF1338 PF07063.13 ORF76561 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) DUF1338 PF07063.13 ORF76384 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) COX8 PF02285.15 ORF76116 - 0.026 14.4 0.1 0.067 13.1 0.0 1.7 1 1 1 2 2 2 0 Cytochrome oxidase c subunit VIII Arm_vescicular PF18770.1 ORF75536 - 0.02 14.8 0.1 0.023 14.6 0.1 1.1 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor YfdX PF10938.8 ORF75502 - 0.031 14.2 0.0 0.032 14.2 0.0 1.0 1 0 0 1 1 1 0 YfdX protein U3snoRNP10 PF12397.8 ORF75499 - 0.0078 16.5 0.5 0.008 16.5 0.5 1.0 1 0 0 1 1 1 1 U3 small nucleolar RNA-associated protein 10 Cytochrom_B559 PF00283.19 ORF75429 - 0.043 13.3 0.3 0.058 12.9 0.3 1.2 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits DUF1077 PF06417.12 ORF75133 - 0.07 13.1 0.4 0.071 13.1 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1077) CFC PF09443.10 ORF74130 - 0.78 9.6 7.6 1.8 8.4 3.2 2.4 2 0 0 2 2 2 0 Cripto_Frl-1_Cryptic (CFC) DUF2162 PF09930.9 ORF73736 - 0.068 12.6 2.1 0.083 12.3 2.1 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) DUF1231 PF06802.11 ORF73454 - 0.00035 19.8 2.4 0.00036 19.8 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1231) DMAP1_like PF17024.5 ORF73325 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like XG_FTase PF03254.13 ORF7317 - 0.024 13.3 0.0 0.024 13.3 0.0 1.0 1 0 0 1 1 1 0 Xyloglucan fucosyltransferase Adeno_E1B_55K PF01696.17 ORF73005 - 0.015 14.0 0.1 0.015 14.0 0.1 1.0 1 0 0 1 1 1 0 Adenovirus EB1 55K protein / large t-antigen PIP49_N PF14875.6 ORF72827 - 0.0065 16.4 0.4 0.0065 16.4 0.4 1.0 1 0 0 1 1 1 1 N-term cysteine-rich ER, FAM69 F-box PF00646.33 ORF71872 - 0.25 11.3 0.9 0.25 11.3 0.9 1.6 2 0 0 2 2 2 0 F-box domain zf-CGNR PF11706.8 ORF70772 - 0.041 13.7 2.7 0.073 12.9 2.7 1.3 1 0 0 1 1 1 0 CGNR zinc finger DUF2554 PF10829.8 ORF70583 - 0.17 12.3 0.2 0.19 12.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2554) Elicitin PF00964.17 ORF70548 - 0.0058 16.7 0.3 0.0065 16.6 0.3 1.1 1 0 0 1 1 1 1 Elicitin UCH PF00443.29 ORF69347 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF69347 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor Cas_NE0113 PF09623.10 ORF68442 - 0.061 13.0 0.1 0.064 12.9 0.1 1.0 1 0 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) AA_permease_C PF13906.6 ORF68224 - 0.012 15.6 0.6 0.017 15.2 0.6 1.2 1 0 0 1 1 1 0 C-terminus of AA_permease ECF_trnsprt PF12822.7 ORF68224 - 0.048 13.8 0.9 0.061 13.4 0.9 1.0 1 0 0 1 1 1 0 ECF transporter, substrate-specific component DMAP1_like PF17024.5 ORF68006 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like DMAP1_like PF17024.5 ORF67680 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like DUF641 PF04859.12 ORF6753 - 0.078 13.3 5.3 0.081 13.3 5.3 1.0 1 0 0 1 1 1 0 Plant protein of unknown function (DUF641) FAM76 PF16046.5 ORF6753 - 0.25 10.7 5.8 0.25 10.7 5.8 1.0 1 0 0 1 1 1 0 FAM76 protein TPR_2 PF07719.17 ORF67489 - 0.035 14.2 0.2 11 6.4 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Pepsin-I3 PF06394.13 ORF67489 - 0.085 13.1 0.7 0.12 12.6 0.7 1.5 1 1 0 1 1 1 0 Pepsin inhibitor-3-like repeated domain YdjO PF14169.6 ORF67239 - 0.083 12.6 2.0 0.1 12.3 2.0 1.2 1 0 0 1 1 1 0 Cold-inducible protein YdjO CSD PF00313.22 ORF66986 - 0.015 15.1 0.1 0.017 14.9 0.1 1.3 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain DUF1883 PF08980.10 ORF66986 - 0.1 12.5 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1883) DUF2873 PF11395.8 ORF66746 - 3.1 7.7 9.1 9 6.2 3.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2873) Cys_rich_KTR PF14205.6 ORF66712 - 0.053 13.3 0.6 0.077 12.8 0.6 1.3 1 0 0 1 1 1 0 Cysteine-rich KTR Ribosomal_L33 PF00471.20 ORF66218 - 0.02 15.4 0.2 0.023 15.2 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L33 Orf78 PF06024.12 ORF66101 - 2.3 8.5 5.3 2.3 8.6 4.9 1.3 1 1 0 1 1 1 0 Orf78 (ac78) NODP PF07684.12 ORF65905 - 0.027 14.6 0.8 0.039 14.1 0.8 1.3 1 0 0 1 1 1 0 NOTCH protein TT_ORF1 PF02956.14 ORF65741 - 0.041 12.6 0.9 0.045 12.4 0.9 1.0 1 0 0 1 1 1 0 TT viral orf 1 UCH PF00443.29 ORF65515 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF65515 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor Shugoshin_N PF07558.11 ORF65242 - 0.02 14.8 0.1 0.039 13.8 0.1 1.5 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region DUF2457 PF10446.9 ORF63719 - 1.8 7.6 11.7 1.8 7.6 11.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF2080 PF09853.9 ORF62594 - 0.08 12.7 0.1 0.12 12.2 0.1 1.2 1 0 0 1 1 1 0 Putative transposon-encoded protein (DUF2080) FAM86 PF14904.6 ORF62524 - 0.052 13.6 0.1 0.059 13.5 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function EZH2_N PF18601.1 ORF61764 - 0.12 12.7 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 EZH2 N-terminal domain TetR_C_30 PF17939.1 ORF61461 - 0.094 12.9 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Fig1 PF12351.8 ORF60567 - 0.005 16.8 0.4 0.0051 16.8 0.4 1.0 1 0 0 1 1 1 1 Ca2+ regulator and membrane fusion protein Fig1 DUF1601 PF07671.11 ORF60514 - 0.28 11.1 1.2 6.3 6.7 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1601) Fig1 PF12351.8 ORF59924 - 0.005 16.8 0.4 0.0051 16.8 0.4 1.0 1 0 0 1 1 1 1 Ca2+ regulator and membrane fusion protein Fig1 DUF749 PF05370.11 ORF59729 - 0.016 15.2 1.8 0.018 15.1 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF749) DivIC PF04977.15 ORF59729 - 0.85 9.4 8.0 3.4 7.5 0.5 2.1 1 1 1 2 2 2 0 Septum formation initiator EVI2A PF05399.11 ORF59413 - 7 6.2 6.7 7.2 6.1 6.7 1.1 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) KRAB PF01352.27 ORF58967 - 0.91 9.2 3.4 0.5 10.1 1.3 1.7 2 0 0 2 2 2 0 KRAB box FYVE_2 PF02318.16 ORF58926 - 0.056 13.7 3.0 0.061 13.5 3.0 1.0 1 0 0 1 1 1 0 FYVE-type zinc finger DUF3402 PF11882.8 ORF58615 - 0.27 10.3 2.6 0.26 10.3 2.0 1.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3402) Sigma_reg_N PF13800.6 ORF58358 - 0.003 17.8 1.8 0.0032 17.7 1.8 1.1 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF5385 PF17359.2 ORF58358 - 0.47 10.0 1.1 0.54 9.8 1.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) 7TM_GPCR_Srz PF10325.9 ORF58324 - 0.0072 15.7 1.6 0.0074 15.7 1.6 1.0 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srz CEP76-C2 PF15627.6 ORF57403 - 0.013 15.1 0.1 0.015 14.9 0.1 1.1 1 0 0 1 1 1 0 CEP76 C2 domain RasGAP_C PF03836.15 ORF57347 - 0.0025 18.0 5.0 0.0026 17.9 5.0 1.0 1 0 0 1 1 1 1 RasGAP C-terminus DUF4872 PF16169.5 ORF57347 - 0.003 17.4 0.1 0.003 17.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4872) FAM25 PF15825.5 ORF57347 - 0.24 11.8 4.4 0.46 10.9 2.9 2.0 1 1 1 2 2 2 0 FAM25 family zf-C4H2 PF10146.9 ORF57347 - 0.74 10.1 7.6 0.74 10.1 7.6 1.0 1 0 0 1 1 1 0 Zinc finger-containing protein Lipin_N PF04571.14 ORF57345 - 0.018 15.0 0.0 0.018 15.0 0.0 1.1 1 0 0 1 1 1 0 lipin, N-terminal conserved region Tom22 PF04281.13 ORF57345 - 0.17 11.7 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 DMAP1_like PF17024.5 ORF57202 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like Spike_NTD PF16451.5 ORF56774 - 0.016 14.5 0.8 0.016 14.5 0.8 1.0 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain DUF3136 PF11334.8 ORF56774 - 0.098 12.5 0.3 0.14 12.0 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3136) DUF4777 PF16007.5 ORF56299 - 0.015 15.6 0.0 0.015 15.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks460.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks460.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks460.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks460.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SUa-2TM PF18179.1 ORF56080 - 0.03 13.6 0.2 0.032 13.5 0.2 1.0 1 0 0 1 1 1 0 SMODS- and Ubiquitin system-associated 2TM effector domain nsp8 PF08717.10 ORF56020 - 0.16 11.8 0.1 0.18 11.7 0.1 1.0 1 0 0 1 1 1 0 nsp8 replicase DUF2062 PF09835.9 ORF55966 - 0.11 12.4 0.2 0.16 11.9 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Protamine_like PF06382.11 ORF55882 - 0.024 14.8 0.0 0.026 14.7 0.0 1.1 1 0 0 1 1 1 0 Protamine and protamine like Npa1 PF11707.8 ORF55882 - 0.036 13.4 0.2 0.037 13.4 0.2 1.1 1 0 0 1 1 1 0 Ribosome 60S biogenesis N-terminal DNA_pol3_a_NII PF11490.8 ORF55882 - 0.13 12.2 0.1 0.15 12.0 0.1 1.1 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II Methyltransf_FA PF12248.8 ORF55755 - 0.074 13.4 0.0 0.078 13.3 0.0 1.1 1 0 0 1 1 1 0 Farnesoic acid 0-methyl transferase Humanin PF15040.6 ORF55675 - 0.25 10.8 0.1 0.25 10.8 0.1 1.6 2 0 0 2 2 2 0 Humanin family LIN52 PF10044.9 ORF55473 - 0.065 13.9 2.2 0.07 13.8 2.2 1.0 1 0 0 1 1 1 0 Retinal tissue protein DUF3810 PF12725.7 ORF54543 - 0.32 10.3 2.7 0.33 10.3 2.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Ibs_toxin PF13956.6 ORF54543 - 0.53 10.4 4.3 6.7 6.8 0.2 2.6 2 0 0 2 2 2 0 Toxin Ibs, type I toxin-antitoxin system GcnA_N PF18229.1 ORF54491 - 1.2 9.2 3.1 0.95 9.5 1.1 1.8 1 1 1 2 2 2 0 N-acetyl-beta-D-glucosaminidase N-terminal domain DUF4190 PF13828.6 ORF54036 - 0.0054 16.5 0.0 0.0065 16.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4190) Beta-lactamase2 PF13354.6 ORF53920 - 0.11 12.1 0.1 0.12 11.9 0.1 1.1 1 0 0 1 1 1 0 Beta-lactamase enzyme family DUF3019 PF11456.8 ORF53861 - 0.021 15.3 0.4 0.024 15.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3019) Knl1_RWD_C PF18210.1 ORF52966 - 0.11 13.0 0.1 0.13 12.7 0.1 1.1 1 0 0 1 1 1 0 Knl1 RWD C-terminal domain RasGEF_N PF00618.20 ORF52508 - 0.18 12.1 3.0 0.21 11.8 3.0 1.1 1 0 0 1 1 1 0 RasGEF N-terminal motif SapA PF02199.15 ORF52226 - 0.0076 16.5 4.4 0.011 16.0 4.4 1.3 1 0 0 1 1 1 1 Saposin A-type domain MORN PF02493.20 ORF51620 - 2.3e-11 42.9 11.1 0.006 16.4 5.3 3.1 3 0 0 3 3 3 3 MORN repeat VIT_2 PF13757.6 ORF5049 - 0.041 13.8 0.6 0.1 12.5 0.4 1.7 1 1 1 2 2 2 0 Vault protein inter-alpha-trypsin domain DUF1540 PF07561.11 ORF50269 - 0.58 10.5 6.9 0.15 12.4 0.7 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1540) Importin_rep_3 PF18806.1 ORF50129 - 0.044 13.8 2.4 0.051 13.6 2.4 1.1 1 0 0 1 1 1 0 Importin 13 repeat Reprolysin PF01421.19 ORF49634 - 0.57 10.0 3.6 0.61 9.9 3.6 1.1 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease DUF4295 PF14128.6 ORF49291 - 0.049 13.4 1.1 0.067 13.0 1.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4295) Filament_head PF04732.14 ORF48987 - 0.0013 19.5 3.4 0.0015 19.4 3.4 1.0 1 0 0 1 1 1 1 Intermediate filament head (DNA binding) region YqgC PF17430.2 ORF48929 - 0.043 13.9 0.0 0.051 13.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized YqgC-like OrfA PF17495.2 ORF48593 - 0.13 12.5 0.4 0.13 12.4 0.4 1.1 1 0 0 1 1 1 0 Vpr-like OrfA 2-oxogl_dehyd_N PF16078.5 ORF48578 - 0.14 11.8 0.1 0.83 9.3 0.0 1.9 2 0 0 2 2 2 0 2-oxoglutarate dehydrogenase N-terminus Coprogen_oxidas PF01218.18 ORF48174 - 0.047 12.4 0.0 0.049 12.4 0.0 1.0 1 0 0 1 1 1 0 Coproporphyrinogen III oxidase DUF1737 PF08410.10 ORF4812 - 0.023 14.6 0.1 0.031 14.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1737) Sec31 PF11549.8 ORF4812 - 0.83 9.6 2.3 9.9 6.2 0.1 2.2 1 1 1 2 2 2 0 Protein transport protein SEC31 Pox_T4_C PF04490.12 ORF48102 - 0.012 15.8 0.0 0.014 15.5 0.0 1.0 1 0 0 1 1 1 0 Poxvirus T4 protein, C terminus zf-HYPF PF07503.12 ORF48045 - 0.043 13.6 0.0 0.12 12.2 0.0 1.8 1 0 0 1 1 1 0 HypF finger RPS31 PF17067.5 ORF47873 - 0.01 16.0 3.4 0.011 15.9 3.4 1.1 1 0 0 1 1 1 0 Ribosomal protein S31e 2TM PF13239.6 ORF473 - 0.62 10.4 3.6 1.3 9.4 0.0 2.0 1 1 1 2 2 2 0 2TM domain DUF1289 PF06945.13 ORF47200 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) Metallopep PF12044.8 ORF4693 - 0.092 11.3 0.0 0.093 11.3 0.0 1.0 1 0 0 1 1 1 0 Putative peptidase family Toxin_29 PF08116.11 ORF46802 - 0.27 11.3 3.8 2.4 8.2 0.3 2.4 2 0 0 2 2 2 0 PhTx neurotoxin family R3H PF01424.22 ORF46789 - 0.14 12.2 0.0 0.24 11.4 0.0 1.4 1 1 0 1 1 1 0 R3H domain Copper-fist PF00649.18 ORF46758 - 0.041 13.4 1.4 0.041 13.4 1.4 2.9 2 1 1 3 3 3 0 Copper fist DNA binding domain DUF1289 PF06945.13 ORF46553 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) Phage_30_3 PF08010.11 ORF46450 - 0.22 11.3 0.0 0.22 11.3 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage protein GP30.3 UL2 PF08196.11 ORF46309 - 0.029 14.3 0.5 0.046 13.7 0.3 1.4 1 1 0 1 1 1 0 UL2 protein DMAP1_like PF17024.5 ORF46140 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like RVT_thumb PF06817.14 ORF45836 - 0.075 12.9 0.1 0.088 12.7 0.1 1.1 1 0 0 1 1 1 0 Reverse transcriptase thumb domain MSP1a PF11670.8 ORF45216 - 0.099 11.9 0.2 0.11 11.8 0.2 1.1 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) Tenui_NS3 PF05310.12 ORF45001 - 0.078 13.1 0.0 0.081 13.0 0.0 1.0 1 0 0 1 1 1 0 Tenuivirus movement protein VQ PF05678.14 ORF45001 - 0.18 11.3 0.3 0.27 10.7 0.3 1.3 1 0 0 1 1 1 0 VQ motif Metallopep PF12044.8 ORF44294 - 0.092 11.3 0.0 0.093 11.3 0.0 1.0 1 0 0 1 1 1 0 Putative peptidase family Rer1 PF03248.13 ORF43929 - 0.018 14.8 0.4 0.018 14.8 0.4 1.0 1 0 0 1 1 1 0 Rer1 family DUF1440 PF07274.12 ORF43511 - 2e-13 50.8 1.0 2.4e-13 50.6 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1440) DUF2963 PF11178.8 ORF42905 - 0.0059 16.3 1.5 0.0059 16.3 1.5 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2963) zf-Nse PF11789.8 ORF42243 - 0.025 14.4 0.7 0.04 13.7 0.5 1.5 1 1 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit DUF1265 PF06887.14 ORF42117 - 0.1 12.6 0.2 0.15 12.1 0.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1265) TetR_C_20 PF17925.1 ORF41687 - 0.033 14.5 0.0 0.042 14.2 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain DUF512 PF04459.12 ORF41678 - 0.049 12.9 0.1 0.055 12.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF512) eIF-5_eIF-2B PF01873.17 ORF41678 - 0.082 12.8 0.2 0.084 12.8 0.2 1.1 1 0 0 1 1 1 0 Domain found in IF2B/IF5 DUF3094 PF11293.8 ORF41612 - 0.046 13.4 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) CactinC_cactus PF09732.9 ORF40882 - 0.038 13.9 0.0 0.04 13.8 0.0 1.1 1 0 0 1 1 1 0 Cactus-binding C-terminus of cactin protein Elicitin PF00964.17 ORF40761 - 0.0058 16.7 0.3 0.0065 16.6 0.3 1.1 1 0 0 1 1 1 1 Elicitin DUF1304 PF06993.12 ORF40656 - 0.1 12.6 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1304) Fer4_13 PF13370.6 ORF40360 - 0.096 13.2 0.3 0.13 12.9 0.3 1.2 1 0 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Tymo_45kd_70kd PF03251.13 ORF40126 - 0.13 11.2 0.0 0.13 11.2 0.0 1.0 1 0 0 1 1 1 0 Tymovirus 45/70Kd protein Cathelicidins PF00666.17 ORF39835 - 0.026 14.8 0.3 0.029 14.7 0.3 1.1 1 0 0 1 1 1 0 Cathelicidin F-box-like PF12937.7 ORF3965 - 0.06 13.3 1.1 0.087 12.7 1.1 1.3 1 0 0 1 1 1 0 F-box-like PRIMA1 PF16101.5 ORF39190 - 0.0061 16.6 1.5 0.0062 16.6 1.5 1.0 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 Ribosomal_L40e PF01020.17 ORF38801 - 0.88 9.5 3.6 0.41 10.6 0.3 1.9 2 0 0 2 2 2 0 Ribosomal L40e family zf-CCCH_2 PF14608.6 ORF38675 - 0.021 15.3 1.0 0.021 15.3 1.0 2.5 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger DnaJ PF00226.31 ORF38592 - 1.1e-09 38.2 1.9 3.7e-09 36.6 1.5 1.8 2 0 0 2 2 2 1 DnaJ domain Pfk_N PF18468.1 ORF38366 - 0.026 14.9 0.0 0.027 14.9 0.0 1.1 1 0 0 1 1 1 0 Phosphofructokinase N-terminal domain yeast zf-3CxxC PF13695.6 ORF37704 - 0.042 14.3 0.1 0.046 14.2 0.1 1.0 1 0 0 1 1 1 0 Zinc-binding domain UCH PF00443.29 ORF37215 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF37215 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor DUF3155 PF11352.8 ORF37151 - 0.087 13.3 0.0 0.087 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3155) VIT_2 PF13757.6 ORF37100 - 0.041 13.8 0.6 0.1 12.5 0.4 1.7 1 1 1 2 2 2 0 Vault protein inter-alpha-trypsin domain Wap1 PF16997.5 ORF36746 - 0.021 14.0 1.4 0.021 14.0 1.4 1.0 1 0 0 1 1 1 0 Wap1 domain DUF2633 PF11119.8 ORF36595 - 1.1 9.2 4.0 0.38 10.7 0.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2633) DUF3489 PF11994.8 ORF35745 - 0.16 12.0 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) Striatin PF08232.12 ORF3568 - 0.0067 17.0 0.5 0.12 12.9 0.2 1.9 1 1 1 2 2 2 2 Striatin family COP23 PF14218.6 ORF35660 - 0.07 12.9 0.1 0.07 12.9 0.1 1.2 1 0 0 1 1 1 0 Circadian oscillating protein COP23 Prefoldin PF02996.17 ORF35105 - 0.097 12.6 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Prefoldin subunit DUF3136 PF11334.8 ORF35081 - 0.18 11.6 1.9 0.19 11.5 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3136) Transp_Tc5_C PF04236.15 ORF34421 - 0.9 9.9 0.1 0.9 9.9 0.1 2.1 1 1 1 2 2 2 0 Tc5 transposase C-terminal domain SH3_7 PF12914.7 ORF34309 - 0.043 14.0 0.2 0.067 13.4 0.2 1.3 1 0 0 1 1 1 0 SH3 domain of SH3b2 type Longin PF13774.6 ORF33963 - 0.019 15.0 0.1 5.7 7.1 0.0 2.0 2 0 0 2 2 2 0 Regulated-SNARE-like domain zf-C2H2_3 PF13878.6 ORF3361 - 0.58 10.0 5.8 0.84 9.5 5.8 1.2 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO DUF2069 PF09842.9 ORF33594 - 0.014 15.6 1.1 0.015 15.5 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2069) DUF4130 PF13566.6 ORF32204 - 0.048 13.7 0.0 0.052 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4130 CN_hydrolase PF00795.22 ORF32200 - 1.8e-11 43.9 0.0 2.1e-11 43.7 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase BtrH_N PF14399.6 ORF32200 - 0.062 13.6 0.0 0.063 13.5 0.0 1.0 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal PrpR_N PF06506.11 ORF32200 - 0.11 12.1 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 Propionate catabolism activator DUF1156 PF06634.12 ORF31798 - 0.001 19.1 0.1 0.0014 18.7 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1156) Papilloma_E5 PF03025.14 ORF31555 - 0.016 15.3 4.5 0.02 15.0 4.5 1.2 1 0 0 1 1 1 0 Papillomavirus E5 CBM_4_9 PF02018.17 ORF31542 - 0.03 14.6 0.0 0.03 14.6 0.0 1.0 1 0 0 1 1 1 0 Carbohydrate binding domain Pox_A14 PF05767.12 ORF31032 - 0.046 13.9 0.5 0.052 13.7 0.5 1.1 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 DUF1658 PF07871.11 ORF3097 - 0.13 12.3 1.4 0.28 11.2 1.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1658) Sigma_reg_N PF13800.6 ORF30931 - 0.003 17.8 1.9 0.0033 17.7 1.9 1.1 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF5385 PF17359.2 ORF30931 - 0.54 9.8 1.0 0.62 9.6 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Flot PF15975.5 ORF30488 - 0.03 14.5 0.0 0.032 14.4 0.0 1.1 1 0 0 1 1 1 0 Flotillin DUF5326 PF17260.2 ORF30450 - 0.0039 17.3 0.8 0.0045 17.1 0.8 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5326) AbiJ_NTD5 PF18865.1 ORF30298 - 0.043 13.6 0.2 0.066 13.0 0.2 1.3 1 0 0 1 1 1 0 AbiJ N-terminal domain 5 Cytochrom_CIII PF02085.16 ORF30217 - 0.085 13.2 12.3 0.094 13.1 12.3 1.0 1 0 0 1 1 1 0 Class III cytochrome C family DNA_photolyase PF00875.18 ORF30188 - 0.066 13.2 0.1 0.085 12.9 0.1 1.3 1 1 0 1 1 1 0 DNA photolyase Prion PF00377.18 ORF29833 - 0.15 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Prion/Doppel alpha-helical domain DEFB136 PF17333.2 ORF29710 - 0.031 14.2 4.1 0.082 12.9 2.2 2.5 1 1 1 2 2 2 0 Beta defensin 136 Vel1p PF10339.9 ORF29580 - 0.058 12.8 0.2 0.063 12.7 0.2 1.0 1 0 0 1 1 1 0 Yeast-specific zinc responsive LssY_C PF14067.6 ORF2933 - 0.098 12.2 0.1 0.11 12.0 0.1 1.1 1 0 0 1 1 1 0 LssY C-terminus MyTH4 PF00784.17 ORF27883 - 0.084 13.4 0.2 0.089 13.3 0.2 1.1 1 0 0 1 1 1 0 MyTH4 domain Voltage_CLC PF00654.20 ORF27813 - 1e-10 41.5 4.8 1.1e-10 41.3 4.8 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel Sugar_tr PF00083.24 ORF27427 - 0.0067 15.3 0.1 0.007 15.3 0.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter AA_permease_C PF13906.6 ORF2725 - 0.012 15.6 0.6 0.017 15.2 0.6 1.2 1 0 0 1 1 1 0 C-terminus of AA_permease ECF_trnsprt PF12822.7 ORF2725 - 0.048 13.8 0.9 0.061 13.4 0.9 1.0 1 0 0 1 1 1 0 ECF transporter, substrate-specific component DMAP1_like PF17024.5 ORF26885 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like PH PF00169.29 ORF2602 - 3.5e-08 33.9 0.7 3.8e-08 33.8 0.7 1.0 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 ORF2602 - 1.7e-05 25.2 0.4 1.9e-05 25.1 0.4 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain PH_8 PF15409.6 ORF2602 - 0.0025 18.0 0.1 0.0028 17.9 0.1 1.1 1 0 0 1 1 1 1 Pleckstrin homology domain Sugar_tr PF00083.24 ORF25961 - 0.00026 20.0 0.5 0.00028 19.9 0.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter zf-RING_2 PF13639.6 ORF25718 - 8.1e-11 42.1 2.3 1.1e-10 41.7 2.3 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF25718 - 7.4e-10 38.5 2.5 9e-10 38.2 2.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF25718 - 3.1e-09 37.0 3.9 4.3e-09 36.5 3.9 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain Prok-RING_4 PF14447.6 ORF25718 - 8.7e-08 31.9 2.1 1.2e-07 31.4 2.1 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF25718 - 9.5e-07 28.7 1.1 1.5e-06 28.1 1.1 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF25718 - 2.3e-06 27.4 1.2 3.1e-06 27.0 1.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF25718 - 3.5e-06 26.7 0.2 3.5e-06 26.7 0.2 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF25718 - 4.7e-06 26.5 1.0 4.7e-06 26.5 1.0 1.8 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF25718 - 2.7e-05 24.0 0.9 3.9e-05 23.4 0.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF25718 - 7.4e-05 22.7 0.4 0.00012 22.1 0.4 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF25718 - 8.4e-05 22.1 1.4 0.00012 21.6 1.4 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF25718 - 0.0012 18.9 1.6 0.0067 16.6 1.9 1.8 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF25718 - 0.0069 16.2 0.5 0.0096 15.7 0.5 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Rad50_zn_hook PF04423.14 ORF25718 - 0.0094 15.8 0.6 0.012 15.4 0.6 1.3 1 0 0 1 1 1 1 Rad50 zinc hook motif zf-RING-like PF08746.11 ORF25718 - 0.031 14.6 1.7 0.053 13.8 1.7 1.4 1 0 0 1 1 1 0 RING-like domain FANCL_C PF11793.8 ORF25718 - 0.037 14.2 1.7 0.47 10.7 1.7 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain UPF0547 PF10571.9 ORF25718 - 0.054 13.6 4.3 0.52 10.4 0.5 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_16 PF17034.5 ORF25718 - 0.08 13.2 2.6 0.087 13.0 2.2 1.3 1 1 0 1 1 1 0 Zinc-ribbon like family PHD PF00628.29 ORF25718 - 0.082 12.8 3.9 0.17 11.8 3.8 1.6 1 1 0 1 1 1 0 PHD-finger zf-C3H2C3 PF17122.5 ORF25718 - 0.15 12.1 5.1 0.33 11.0 5.1 1.5 1 1 0 1 1 1 0 Zinc-finger UCH PF00443.29 ORF25463 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF25463 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor UCH PF00443.29 ORF25397 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF25397 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor DUF2656 PF10847.8 ORF25199 - 0.066 13.3 0.0 0.067 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2656) Pannexin_like PF12534.8 ORF2512 - 0.11 11.6 0.6 0.12 11.4 0.6 1.0 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 YqzM PF14141.6 ORF25096 - 0.023 14.7 3.3 0.09 12.8 0.7 2.1 2 0 0 2 2 2 0 YqzM-like protein DUF4061 PF13270.6 ORF24852 - 0.08 13.3 0.2 0.081 13.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4061) TRA-1_regulated PF02343.16 ORF24685 - 0.023 14.8 0.3 0.025 14.6 0.3 1.1 1 0 0 1 1 1 0 TRA-1 regulated protein R03H10.4 zf-RING_10 PF16685.5 ORF23836 - 0.0029 17.7 0.5 0.0038 17.3 0.5 1.3 1 0 0 1 1 1 1 zinc RING finger of MSL2 PAP_fibrillin PF04755.12 ORF22612 - 0.069 13.1 0.2 0.069 13.1 0.2 1.0 1 0 0 1 1 1 0 PAP_fibrillin DUF5403 PF17395.2 ORF22529 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) Herpes_UL31 PF02718.14 ORF22008 - 0.087 11.8 0.0 0.097 11.6 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus UL31-like protein TT_ORF1 PF02956.14 ORF21008 - 9.2 4.8 8.9 8.7 4.9 8.9 1.0 1 0 0 1 1 1 0 TT viral orf 1 UCH PF00443.29 ORF20333 - 1.3e-07 31.4 0.1 1.4e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MDFI PF15316.6 ORF20333 - 0.046 13.8 0.2 0.046 13.8 0.2 1.1 1 0 0 1 1 1 0 MyoD family inhibitor Transglut_core3 PF13471.6 ORF20133 - 0.051 13.5 2.8 0.055 13.4 2.8 1.1 1 0 0 1 1 1 0 Transglutaminase-like superfamily BRCC36_C PF18110.1 ORF19571 - 0.1 12.8 0.4 0.095 12.9 0.4 1.2 1 0 0 1 1 1 0 BRCC36 C-terminal helical domain DUF5403 PF17395.2 ORF19421 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) zf-UBP_var PF17807.1 ORF18853 - 0.023 14.5 1.4 0.03 14.1 1.4 1.3 1 0 0 1 1 1 0 Variant UBP zinc finger His_Me_b4a2 PF18275.1 ORF18853 - 0.085 12.9 2.0 0.11 12.6 2.0 1.1 1 0 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain TT_ORF2 PF02957.15 ORF18853 - 0.12 13.3 0.3 0.14 13.1 0.3 1.1 1 0 0 1 1 1 0 TT viral ORF2 Gene66 PF02053.15 ORF18645 - 0.28 10.8 1.5 0.29 10.7 1.5 1.1 1 0 0 1 1 1 0 Gene 66 (IR5) protein DUF4024 PF13216.6 ORF18559 - 0.28 11.1 3.3 0.65 10.0 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4024) DUF1338 PF07063.13 ORF18097 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) TTc_toxin_rep PF18807.1 ORF17970 - 0.081 12.7 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Tripartite Tc toxins repeat YjcB PF15940.5 ORF17663 - 0.066 13.4 0.2 0.072 13.3 0.2 1.1 1 0 0 1 1 1 0 Family of unknown function DUF5426 PF17473.2 ORF17618 - 0.015 15.6 0.6 0.018 15.3 0.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5426) E_Pc_C PF06752.12 ORF17437 - 0.23 11.5 0.9 0.25 11.4 0.9 1.1 1 0 0 1 1 1 0 Enhancer of Polycomb C-terminus DMAP1_like PF17024.5 ORF16900 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like AP3D1 PF06375.11 ORF16825 - 4.5 7.5 16.0 4.8 7.4 16.0 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 ATP-synt_J PF04911.12 ORF16822 - 0.012 15.2 0.4 0.015 14.8 0.4 1.1 1 0 0 1 1 1 0 ATP synthase j chain zf-RRN7 PF11781.8 ORF16687 - 0.038 13.7 0.9 0.048 13.4 0.9 1.2 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF2733 PF10813.8 ORF16596 - 0.23 11.2 2.2 8 6.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) 2-oxogl_dehyd_N PF16078.5 ORF1633 - 0.14 11.8 0.1 0.83 9.3 0.0 1.9 2 0 0 2 2 2 0 2-oxoglutarate dehydrogenase N-terminus DUF3019 PF11456.8 ORF15942 - 0.021 15.3 0.4 0.024 15.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3019) MBDa PF16564.5 ORF15882 - 0.0026 17.9 0.1 0.003 17.7 0.1 1.1 1 0 0 1 1 1 1 p55-binding region of Methyl-CpG-binding domain proteins MBD HEV_ORF1 PF02444.16 ORF152994 - 0.092 13.3 12.2 0.11 13.0 12.2 1.2 1 0 0 1 1 1 0 Hepatitis E virus ORF-2 (Putative capsid protein) TMEM72 PF16054.5 ORF152055 - 0.015 15.0 1.9 0.016 14.9 1.9 1.0 1 0 0 1 1 1 0 Transmembrane protein family 72 T6SS_Vgr PF13296.6 ORF151862 - 0.0088 16.2 0.1 0.0097 16.0 0.1 1.1 1 0 0 1 1 1 1 Putative type VI secretion system Rhs element Vgr 7tm_2 PF00002.24 ORF151848 - 0.0023 17.3 1.2 0.0023 17.3 1.2 1.0 1 0 0 1 1 1 1 7 transmembrane receptor (Secretin family) TMEM132D_C PF15706.5 ORF151145 - 0.0024 17.6 0.5 0.0028 17.4 0.5 1.1 1 0 0 1 1 1 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term CPBP PF02517.16 ORF150714 - 0.31 11.4 5.7 0.36 11.2 5.7 1.0 1 0 0 1 1 1 0 CPBP intramembrane metalloprotease zf-MIZ PF02891.20 ORF150368 - 0.33 10.7 3.5 0.43 10.4 3.5 1.2 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger DUF1338 PF07063.13 ORF150367 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) CBM_14 PF01607.24 ORF149993 - 0.041 14.0 0.1 0.056 13.6 0.1 1.2 1 0 0 1 1 1 0 Chitin binding Peritrophin-A domain DUF443 PF04276.12 ORF149821 - 0.032 14.0 1.1 0.032 14.1 1.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF443) zf-ribbon_3 PF13248.6 ORF147531 - 0.0015 17.9 0.6 0.0038 16.6 0.6 1.7 1 0 0 1 1 1 1 zinc-ribbon domain EF-hand_6 PF13405.6 ORF147217 - 0.0036 17.1 2.2 0.012 15.5 0.8 2.0 1 1 1 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF147217 - 0.004 16.6 0.9 0.0086 15.6 0.3 1.8 1 1 1 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF147217 - 0.0068 16.8 0.5 0.0099 16.3 0.3 1.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF147217 - 0.012 15.1 0.8 0.021 14.3 0.8 1.4 1 0 0 1 1 1 0 EF hand EF-hand_4 PF12763.7 ORF147217 - 0.026 14.5 0.2 0.027 14.4 0.2 1.0 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF1338 PF07063.13 ORF147158 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) DUF3884 PF13024.6 ORF146904 - 0.84 9.2 3.0 1.8 8.2 3.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3884) DUF1289 PF06945.13 ORF146832 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) DUF5463 PF17551.2 ORF144767 - 0.05 13.5 0.1 0.064 13.2 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5463) Rb_C PF08934.10 ORF144562 - 0.12 12.2 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Rb C-terminal domain DUF1289 PF06945.13 ORF144394 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) DUF1700 PF08006.11 ORF143808 - 6.1 6.3 13.1 6.8 6.2 13.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF5090 PF17009.5 ORF143374 - 0.32 10.9 10.0 0.35 10.8 10.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) SH PF01445.17 ORF141777 - 0.023 14.6 1.2 0.029 14.3 1.2 1.3 1 0 0 1 1 1 0 Viral small hydrophobic protein LEP503 PF15221.6 ORF141733 - 0.23 11.8 3.8 0.31 11.4 3.8 1.3 1 1 0 1 1 1 0 Lens epithelial cell protein LEP503 Churchill PF06573.11 ORF141715 - 0.1 12.9 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Churchill protein RNA_pol_A_CTD PF03118.15 ORF141619 - 0.016 15.0 1.4 0.023 14.5 1.4 1.4 1 1 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain MSP1a PF11670.8 ORF141339 - 0.099 11.9 0.2 0.11 11.8 0.2 1.1 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) DUF772 PF05598.11 ORF141209 - 0.11 12.6 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Transposase domain (DUF772) rve_3 PF13683.6 ORF141083 - 0.024 14.4 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 Integrase core domain SUa-2TM PF18179.1 ORF140358 - 0.03 13.6 0.2 0.032 13.5 0.2 1.0 1 0 0 1 1 1 0 SMODS- and Ubiquitin system-associated 2TM effector domain SWIM PF04434.17 ORF139981 - 1.4 8.6 10.7 0.53 10.0 5.0 2.3 2 0 0 2 2 2 0 SWIM zinc finger ACTH_assoc PF16102.5 ORF139967 - 0.13 13.1 0.1 17 6.5 0.0 2.1 2 0 0 2 2 2 0 ACTH-associated domain Ion_trans PF00520.31 ORF139607 - 0.18 11.0 1.2 0.18 11.0 1.2 1.1 1 0 0 1 1 1 0 Ion transport protein Ras PF00071.22 ORF138974 - 3.2e-09 36.6 0.1 3.2e-09 36.6 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF138974 - 2.7e-07 30.8 0.0 2.8e-07 30.8 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF138974 - 0.0084 15.6 0.0 0.0084 15.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family G-alpha PF00503.20 ORF138974 - 0.13 11.4 0.0 0.13 11.4 0.0 1.0 1 0 0 1 1 1 0 G-protein alpha subunit RNA_polI_A14 PF08203.11 ORF138841 - 0.055 14.2 1.1 0.065 14.0 1.1 1.2 1 0 0 1 1 1 0 Yeast RNA polymerase I subunit RPA14 CALM_bind PF16025.5 ORF138841 - 0.086 13.3 2.5 0.13 12.8 2.5 1.2 1 0 0 1 1 1 0 Calcium-dependent calmodulin binding DUF1764 PF08576.10 ORF138806 - 1 10.3 8.0 1.1 10.2 8.0 1.0 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF1764) SMC_N PF02463.19 ORF138436 - 0.03 13.8 0.3 0.036 13.5 0.3 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Chitin_synth_2 PF03142.15 ORF138396 - 2.1 6.8 5.5 2.1 6.9 5.5 1.0 1 0 0 1 1 1 0 Chitin synthase Cation_ATPase_C PF00689.21 ORF138373 - 0.31 10.7 6.7 0.32 10.7 6.7 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF4133 PF13571.6 ORF138373 - 0.95 9.8 5.0 1.1 9.6 5.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4133) AA_permease_C PF13906.6 ORF137959 - 0.012 15.6 0.6 0.017 15.2 0.6 1.2 1 0 0 1 1 1 0 C-terminus of AA_permease ECF_trnsprt PF12822.7 ORF137959 - 0.048 13.8 0.9 0.061 13.4 0.9 1.0 1 0 0 1 1 1 0 ECF transporter, substrate-specific component DUF3813 PF12758.7 ORF137888 - 0.16 12.3 0.5 0.26 11.6 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3813) AKNA PF12443.8 ORF137801 - 0.16 12.7 0.1 0.17 12.5 0.1 1.1 1 0 0 1 1 1 0 AT-hook-containing transcription factor SLT_L PF14718.6 ORF137762 - 0.13 12.5 0.0 0.16 12.1 0.0 1.1 1 0 0 1 1 1 0 Soluble lytic murein transglycosylase L domain zf-RING_4 PF14570.6 ORF137457 - 0.029 14.2 0.4 1.5 8.7 0.1 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain SpoU_methylase PF00588.19 ORF137072 - 1.7e-10 41.2 0.0 1.9e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 SpoU rRNA Methylase family Bile_Hydr_Trans PF04775.14 ORF136373 - 0.055 13.5 0.0 0.067 13.3 0.0 1.1 1 0 0 1 1 1 0 Acyl-CoA thioester hydrolase/BAAT N-terminal region DUF3677 PF12432.8 ORF136302 - 0.09 13.1 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3677) DASH_Dam1 PF08653.10 ORF136302 - 0.093 12.5 0.7 0.14 11.9 0.7 1.4 1 0 0 1 1 1 0 DASH complex subunit Dam1 DUF957 PF06117.11 ORF136211 - 0.054 13.1 0.1 0.077 12.6 0.1 1.2 1 0 0 1 1 1 0 Enterobacterial protein of unknown function (DUF957) DMAP1_like PF17024.5 ORF136073 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like DUF1010 PF06231.11 ORF136040 - 0.017 15.6 3.2 0.018 15.5 3.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1010) FYVE_2 PF02318.16 ORF136040 - 0.21 11.8 4.1 0.22 11.7 4.1 1.1 1 0 0 1 1 1 0 FYVE-type zinc finger YlaC PF10777.9 ORF136039 - 0.0046 16.8 0.2 0.0054 16.6 0.2 1.1 1 0 0 1 1 1 1 Inner membrane protein YlaC PHD_like PF12910.7 ORF135549 - 0.044 13.8 0.1 0.044 13.8 0.1 1.1 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system DUF1610 PF07754.11 ORF134668 - 0.11 12.5 0.7 17 5.4 0.1 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF1610) DUF2518 PF10726.9 ORF133604 - 0.091 12.4 0.0 0.091 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of function (DUF2518) zf-AN1 PF01428.16 ORF133384 - 0.03 14.5 1.9 0.11 12.7 0.5 2.1 2 0 0 2 2 2 0 AN1-like Zinc finger TIL PF01826.17 ORF133076 - 0.2 11.9 7.1 2.9 8.2 4.5 2.1 1 1 1 2 2 2 0 Trypsin Inhibitor like cysteine rich domain DMAP1_like PF17024.5 ORF132744 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like Meis_PKNOX_N PF16493.5 ORF132459 - 0.029 14.7 0.0 0.032 14.6 0.0 1.1 1 0 0 1 1 1 0 N-terminal of Homeobox Meis and PKNOX1 DUF3094 PF11293.8 ORF132184 - 0.046 13.4 0.0 0.07 12.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) zf-CCHC_2 PF13696.6 ORF13168 - 0.043 13.6 0.9 0.065 13.1 0.9 1.3 1 0 0 1 1 1 0 Zinc knuckle DUF3019 PF11456.8 ORF131465 - 0.021 15.3 0.4 0.024 15.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3019) DUF2560 PF10834.8 ORF131371 - 0.09 13.0 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2560) Pacifastin_I PF05375.13 ORF131060 - 0.43 10.3 5.7 1.8 8.4 5.8 1.8 1 1 1 2 2 2 0 Pacifastin inhibitor (LCMII) Chitin_synth_2 PF03142.15 ORF130820 - 2.1 6.8 5.5 2.1 6.9 5.5 1.0 1 0 0 1 1 1 0 Chitin synthase TT_ORF1 PF02956.14 ORF13031 - 0.041 12.6 0.9 0.045 12.4 0.9 1.0 1 0 0 1 1 1 0 TT viral orf 1 Secapin PF17521.2 ORF130258 - 0.046 13.5 0.2 0.072 12.9 0.2 1.3 1 0 0 1 1 1 0 Honey bee peptides WND PF07861.11 ORF130100 - 0.14 11.5 0.1 0.14 11.5 0.1 1.0 1 0 0 1 1 1 0 WisP family N-Terminal Region Bac_GDH PF05088.12 ORF129662 - 0.14 9.6 0.2 0.14 9.6 0.2 1.0 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase DSPc PF00782.20 ORF129251 - 8.6e-08 32.1 0.0 9.9e-08 31.9 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Izumo-Ig PF16706.5 ORF129228 - 0.023 14.8 0.0 0.025 14.6 0.0 1.1 1 0 0 1 1 1 0 Izumo-like Immunoglobulin domain Ig_2 PF13895.6 ORF129228 - 0.056 13.8 0.5 0.056 13.8 0.5 1.1 1 0 0 1 1 1 0 Immunoglobulin domain PgdA_N PF18627.1 ORF128830 - 0.029 14.0 0.7 0.031 13.9 0.7 1.0 1 0 0 1 1 1 0 Peptidoglycan GlcNAc deacetylase N-terminal domain DUF1324 PF07038.11 ORF128607 - 0.084 13.1 0.8 0.13 12.5 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1324) DUF1143 PF06608.11 ORF128412 - 0.014 15.4 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) SSTK-IP PF15836.5 ORF128278 - 0.014 15.5 0.5 0.017 15.3 0.5 1.1 1 0 0 1 1 1 0 SSTK-interacting protein, TSSK6-activating co-chaperone protein Furin-like_2 PF15913.5 ORF127383 - 0.019 15.1 1.0 0.019 15.1 1.0 1.3 1 1 0 1 1 1 0 Furin-like repeat, cysteine-rich DUF3165 PF11364.8 ORF127262 - 0.018 15.4 3.9 0.021 15.2 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3165) Guanylate_cyc_2 PF09778.9 ORF126568 - 0.024 14.0 1.0 0.023 14.1 1.0 1.0 1 0 0 1 1 1 0 Guanylylate cyclase DX PF01666.17 ORF126568 - 0.13 12.7 0.3 0.26 11.7 0.3 1.7 1 1 0 1 1 1 0 DX module DUF1289 PF06945.13 ORF12635 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) PPR_3 PF13812.6 ORF125836 - 0.033 14.3 0.7 0.036 14.1 0.7 1.1 1 0 0 1 1 1 0 Pentatricopeptide repeat domain bPH_4 PF06713.11 ORF125446 - 0.042 13.9 0.1 0.045 13.8 0.1 1.2 1 0 0 1 1 1 0 Bacterial PH domain AP3D1 PF06375.11 ORF125412 - 4.5 7.5 16.0 4.8 7.4 16.0 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DSPc PF00782.20 ORF125059 - 0.00012 21.9 0.1 0.00019 21.3 0.0 1.3 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Lep_receptor_Ig PF06328.11 ORF124842 - 0.074 13.0 0.0 0.082 12.9 0.0 1.1 1 0 0 1 1 1 0 Ig-like C2-type domain zinc_ribbon_12 PF11331.8 ORF124121 - 0.11 12.3 7.3 0.19 11.6 0.5 2.2 2 0 0 2 2 2 0 Probable zinc-ribbon domain Jas PF16135.5 ORF124121 - 0.72 10.1 9.5 9.3 6.5 0.0 2.1 1 1 1 2 2 2 0 TPL-binding domain in jasmonate signalling Prok-E2_B PF14461.6 ORF124061 - 0.0034 17.1 0.1 0.0038 16.9 0.1 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B Torsin PF06309.11 ORF123604 - 0.18 11.9 0.0 0.18 11.9 0.0 1.3 1 1 0 1 1 1 0 Torsin DUF1338 PF07063.13 ORF122114 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) Fer4 PF00037.27 ORF121956 - 7.3e-07 28.7 1.9 1.1e-06 28.2 1.9 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_7 PF12838.7 ORF121956 - 1.2e-05 25.8 0.2 1.3e-05 25.7 0.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF121956 - 2e-05 25.0 0.6 2.6e-05 24.7 0.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF121956 - 2.8e-05 24.1 0.3 3.6e-05 23.8 0.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF121956 - 4.2e-05 23.6 0.4 4.4e-05 23.6 0.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF121956 - 7.1e-05 22.9 1.1 8.9e-05 22.5 1.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF121956 - 7.3e-05 23.0 1.3 9.6e-05 22.6 1.3 1.2 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_6 PF12837.7 ORF121956 - 0.00012 22.0 2.6 0.00018 21.5 2.6 1.3 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_8 PF13183.6 ORF121956 - 0.00022 21.6 0.3 0.00022 21.6 0.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF121956 - 0.00038 21.3 0.2 0.00051 20.9 0.2 1.3 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 ORF121956 - 0.00074 20.3 0.5 0.00091 20.0 0.5 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF121956 - 0.0017 18.3 5.6 0.0027 17.7 5.6 1.3 1 0 0 1 1 1 1 4Fe-4S binding domain Fer4_18 PF13746.6 ORF121956 - 0.005 17.0 0.4 0.0053 16.9 0.4 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF121956 - 0.067 14.2 4.9 0.098 13.6 4.9 1.2 1 0 0 1 1 1 0 4Fe-4S binding domain DUF1338 PF07063.13 ORF121431 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) RNaseH_like PF04308.12 ORF121353 - 0.18 11.7 0.0 0.21 11.5 0.0 1.1 1 0 0 1 1 1 0 Ribonuclease H-like Doppel PF11466.8 ORF120818 - 0.092 12.4 0.4 0.16 11.7 0.4 1.4 1 0 0 1 1 1 0 Prion-like protein Doppel DUF3487 PF11990.8 ORF120338 - 4.9 7.1 16.2 5.5 6.9 16.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) DUF1338 PF07063.13 ORF120152 - 0.17 11.0 0.0 0.18 10.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1338) FAM176 PF14851.6 ORF118654 - 0.11 12.2 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 FAM176 family Vps51 PF08700.11 ORF118289 - 0.05 13.7 0.3 0.059 13.5 0.3 1.1 1 0 0 1 1 1 0 Vps51/Vps67 DUF3810 PF12725.7 ORF118124 - 0.32 10.3 2.7 0.33 10.3 2.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) Ibs_toxin PF13956.6 ORF118124 - 0.53 10.4 4.3 6.7 6.8 0.2 2.6 2 0 0 2 2 2 0 Toxin Ibs, type I toxin-antitoxin system # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks461.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks461.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks461.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks461.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:46:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4126 PF13548.6 ORF117443 - 0.056 13.1 0.1 0.061 13.0 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) MSP1a PF11670.8 ORF11576 - 0.099 11.9 0.2 0.11 11.8 0.2 1.1 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) DUF1540 PF07561.11 ORF115560 - 0.58 10.5 6.9 0.15 12.4 0.7 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1540) PPDFL PF15060.6 ORF114908 - 0.07 13.7 0.7 0.086 13.4 0.7 1.2 1 0 0 1 1 1 0 Differentiation and proliferation regulator PRIMA1 PF16101.5 ORF114551 - 0.0061 16.6 1.5 0.0062 16.6 1.5 1.0 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 DUF5403 PF17395.2 ORF11451 - 0.04 14.2 0.1 0.043 14.1 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5403) TIL PF01826.17 ORF113789 - 0.18 12.1 5.3 0.22 11.8 5.3 1.3 1 0 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain Mito_carr PF00153.27 ORF113261 - 2.7e-06 27.2 0.0 3.2e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein DUF4181 PF13789.6 ORF113261 - 0.048 13.9 0.1 0.057 13.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) DUF3136 PF11334.8 ORF113216 - 0.18 11.6 1.9 0.19 11.5 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3136) RPN2_C PF18004.1 ORF112659 - 0.032 14.1 0.4 0.032 14.1 0.4 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain Herpes_U15 PF05613.11 ORF112272 - 0.047 14.4 1.4 0.043 14.5 1.4 1.1 1 0 0 1 1 1 0 Human herpesvirus U15 protein UPF0223 PF05256.12 ORF112098 - 0.06 13.7 0.0 0.065 13.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0223) Herpes_LAMP2 PF06126.11 ORF112031 - 0.025 13.2 0.5 0.026 13.2 0.5 1.0 1 0 0 1 1 1 0 Herpesvirus Latent membrane protein 2 DUF281 PF03436.13 ORF110946 - 0.016 15.6 0.4 0.016 15.6 0.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF281) Wzy_C PF04932.15 ORF110750 - 0.16 11.6 9.0 0.18 11.4 9.0 1.0 1 0 0 1 1 1 0 O-Antigen ligase DUF4131 PF13567.6 ORF110750 - 1 9.0 3.9 1.1 8.9 3.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) 2TM PF13239.6 ORF110750 - 3.2 8.1 12.1 3.8 7.9 12.1 1.1 1 0 0 1 1 1 0 2TM domain Vps36_ESCRT-II PF11605.8 ORF110453 - 0.0052 16.9 0.1 0.006 16.7 0.1 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting protein 36 Vps36 BBL5 PF07289.11 ORF110453 - 0.021 13.9 0.0 0.021 13.9 0.0 1.0 1 0 0 1 1 1 0 Bardet-Biedl syndrome 5 protein CAMSAP_CH PF11971.8 ORF110078 - 0.092 12.6 0.1 0.092 12.6 0.1 1.0 1 0 0 1 1 1 0 CAMSAP CH domain DUF776 PF05604.11 ORF109979 - 0.0019 18.6 0.6 0.0021 18.5 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF776) Asp4 PF16996.5 ORF109979 - 0.044 13.6 0.1 0.06 13.1 0.1 1.2 1 0 0 1 1 1 0 Accessory secretory protein Sec Asp4 zf-RING_2 PF13639.6 ORF109210 - 8.1e-11 42.1 2.3 1.1e-10 41.7 2.3 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF109210 - 7.4e-10 38.5 2.5 9e-10 38.2 2.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF109210 - 3.1e-09 37.0 3.9 4.3e-09 36.5 3.9 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain Prok-RING_4 PF14447.6 ORF109210 - 8.7e-08 31.9 2.1 1.2e-07 31.4 2.1 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF109210 - 9.5e-07 28.7 1.1 1.5e-06 28.1 1.1 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF109210 - 2.3e-06 27.4 1.2 3.1e-06 27.0 1.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF109210 - 3.5e-06 26.7 0.2 3.5e-06 26.7 0.2 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF109210 - 4.7e-06 26.5 1.0 4.7e-06 26.5 1.0 1.8 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF109210 - 2.7e-05 24.0 0.9 3.9e-05 23.4 0.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF109210 - 7.4e-05 22.7 0.4 0.00012 22.1 0.4 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF109210 - 8.4e-05 22.1 1.4 0.00012 21.6 1.4 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF109210 - 0.0012 18.9 1.6 0.0067 16.6 1.9 1.8 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 ORF109210 - 0.0069 16.2 0.5 0.0096 15.7 0.5 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Rad50_zn_hook PF04423.14 ORF109210 - 0.0094 15.8 0.6 0.012 15.4 0.6 1.3 1 0 0 1 1 1 1 Rad50 zinc hook motif zf-RING-like PF08746.11 ORF109210 - 0.031 14.6 1.7 0.053 13.8 1.7 1.4 1 0 0 1 1 1 0 RING-like domain FANCL_C PF11793.8 ORF109210 - 0.037 14.2 1.7 0.47 10.7 1.7 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain UPF0547 PF10571.9 ORF109210 - 0.054 13.6 4.3 0.52 10.4 0.5 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_16 PF17034.5 ORF109210 - 0.08 13.2 2.6 0.087 13.0 2.2 1.3 1 1 0 1 1 1 0 Zinc-ribbon like family PHD PF00628.29 ORF109210 - 0.082 12.8 3.9 0.17 11.8 3.8 1.6 1 1 0 1 1 1 0 PHD-finger zf-C3H2C3 PF17122.5 ORF109210 - 0.15 12.1 5.1 0.33 11.0 5.1 1.5 1 1 0 1 1 1 0 Zinc-finger GATA PF00320.27 ORF107853 - 0.14 11.8 3.2 0.52 10.0 3.2 1.9 1 1 0 1 1 1 0 GATA zinc finger MSP1a PF11670.8 ORF107755 - 0.099 11.9 0.2 0.11 11.8 0.2 1.1 1 0 0 1 1 1 0 Major surface protein 1a (MSP1a) Beta-TrCP_D PF12125.8 ORF107662 - 0.098 12.6 0.4 1.5 8.8 0.1 2.1 1 1 1 2 2 2 0 D domain of beta-TrCP DUF1289 PF06945.13 ORF107175 - 0.071 12.9 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) DMAP1_like PF17024.5 ORF106690 - 0.048 13.8 0.4 0.059 13.5 0.4 1.2 1 0 0 1 1 1 0 Putative DMAP1-like YkuI_C PF10388.9 ORF106394 - 0.0041 17.0 0.4 0.0041 17.0 0.4 1.0 1 0 0 1 1 1 1 EAL-domain associated signalling protein domain TMEM95 PF15203.6 ORF106394 - 0.069 12.8 0.4 0.09 12.4 0.4 1.1 1 0 0 1 1 1 0 TMEM95 family Sigma_reg_N PF13800.6 ORF106035 - 0.003 17.8 1.9 0.0033 17.7 1.9 1.1 1 0 0 1 1 1 1 Sigma factor regulator N-terminal DUF5385 PF17359.2 ORF106035 - 0.54 9.8 1.0 0.62 9.6 1.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) NST1 PF13945.6 ORF105865 - 0.19 11.8 0.7 0.21 11.7 0.7 1.1 1 0 0 1 1 1 0 Salt tolerance down-regulator NODP PF07684.12 ORF105856 - 0.027 14.6 0.8 0.039 14.1 0.8 1.3 1 0 0 1 1 1 0 NOTCH protein HIRAN PF08797.11 ORF105484 - 0.035 14.0 0.0 0.041 13.8 0.0 1.1 1 0 0 1 1 1 0 HIRAN domain Churchill PF06573.11 ORF105393 - 0.1 12.9 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 Churchill protein DUF4077 PF13295.6 ORF105006 - 0.0019 18.2 0.4 0.002 18.1 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4077) TT_ORF1 PF02956.14 ORF10482 - 4.2 5.9 7.5 4.7 5.8 7.5 1.0 1 0 0 1 1 1 0 TT viral orf 1 DUF3136 PF11334.8 ORF104715 - 0.18 11.6 1.9 0.19 11.5 1.4 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3136) MRPL52 PF18699.1 ORF103737 - 0.014 15.5 0.9 0.019 15.2 0.9 1.2 1 0 0 1 1 1 0 Mitoribosomal protein mL52 DUF5096 PF17019.5 ORF103737 - 0.099 12.4 5.3 0.1 12.4 5.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5096) DUF3828 PF12883.7 ORF102766 - 0.015 15.7 0.0 0.015 15.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3828) SAYSvFN PF10260.9 ORF102720 - 0.064 13.2 0.2 0.085 12.8 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved domain (SAYSvFN) Las1 PF04031.13 ORF102693 - 0.049 13.7 0.4 0.05 13.7 0.4 1.1 1 0 0 1 1 1 0 Las1-like DUF2547 PF10818.8 ORF102693 - 0.65 11.0 3.8 0.7 10.9 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2547) TetR_C_20 PF17925.1 ORF101815 - 0.033 14.5 0.0 0.042 14.2 0.0 1.1 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain MAGI_u5 PF16666.5 ORF101263 - 0.011 15.9 0.3 0.013 15.7 0.3 1.0 1 0 0 1 1 1 0 Unstructured region on MAGI DNAPolymera_Pol PF11590.8 ORF100814 - 0.093 12.6 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase catalytic subunit Pol Sid-5 PF17204.3 ORF100271 - 0.078 13.2 0.0 0.095 12.9 0.0 1.2 1 0 0 1 1 1 0 Sid-5 family Phage_TAC_6 PF09550.10 NODE_90035_length_180_cov_0.827586_g82094_i0forward_frame_2 - 0.037 14.5 0.2 0.05 14.0 0.2 1.2 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Glyco_transf_20 PF00982.21 NODE_90027_length_180_cov_0.827586_g82086_i0reverse_frame_2 - 0.085 11.5 0.3 0.091 11.4 0.3 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 Y_Y_Y PF07495.13 NODE_90027_length_180_cov_0.827586_g82086_i0forward_frame_2 - 0.036 14.0 0.0 0.042 13.8 0.0 1.1 1 0 0 1 1 1 0 Y_Y_Y domain UCR_Fe-S_N PF10399.9 NODE_90026_length_180_cov_0.827586_g82085_i0forward_frame_3 - 0.15 11.4 0.1 0.2 11.0 0.1 1.2 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CAP PF00188.26 NODE_90021_length_180_cov_0.855172_g82080_i0forward_frame_3 - 0.02 15.7 0.1 0.022 15.6 0.1 1.1 1 0 0 1 1 1 0 Cysteine-rich secretory protein family PTN_MK_N PF05196.13 NODE_90021_length_180_cov_0.855172_g82080_i0forward_frame_3 - 0.13 12.5 4.3 0.17 12.1 4.3 1.2 1 0 0 1 1 1 0 PTN/MK heparin-binding protein family, N-terminal domain UPF0228 PF05727.11 NODE_90018_length_180_cov_0.889655_g82077_i0reverse_frame_2 - 0.13 12.1 0.1 0.14 12.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0228) Atrophin-1 PF03154.15 NODE_90015_length_180_cov_0.903448_g82074_i0reverse_frame_3 - 0.06 11.6 8.7 0.058 11.7 8.7 1.0 1 0 0 1 1 1 0 Atrophin-1 family Phage_Gp23 PF10669.9 NODE_90015_length_180_cov_0.903448_g82074_i0reverse_frame_3 - 0.33 11.3 0.9 0.29 11.5 0.9 1.1 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) BES1_N PF05687.13 NODE_90015_length_180_cov_0.903448_g82074_i0reverse_frame_3 - 0.62 10.4 7.7 0.63 10.4 7.7 1.1 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal DUF3915 PF13054.6 NODE_90015_length_180_cov_0.903448_g82074_i0reverse_frame_3 - 0.76 9.8 6.2 0.94 9.5 6.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3915) Auts2 PF15336.6 NODE_90015_length_180_cov_0.903448_g82074_i0reverse_frame_3 - 0.88 9.7 3.6 0.9 9.6 3.6 1.2 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Kelch_6 PF13964.6 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 2.5e-09 37.1 0.5 7.4e-09 35.6 0.2 1.7 1 1 1 2 2 2 1 Kelch motif Kelch_3 PF13415.6 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 6.5e-06 26.3 0.0 7.7e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_4 PF13418.6 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 1.3e-05 25.1 2.0 1.3e-05 25.1 1.4 1.4 1 1 0 1 1 1 1 Galactose oxidase, central domain Kelch_5 PF13854.6 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 3.1e-05 23.8 3.5 0.0012 18.8 1.8 2.1 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 3.4e-05 23.3 0.8 3.4e-05 23.3 0.8 1.5 2 0 0 2 2 2 1 Kelch motif Kelch_2 PF07646.15 NODE_90014_length_180_cov_0.910345_g82073_i0reverse_frame_3 - 0.0039 17.1 2.2 0.0055 16.6 1.2 1.8 1 1 1 2 2 2 1 Kelch motif Colipase PF01114.18 NODE_90013_length_180_cov_0.910345_g82072_i0forward_frame_2 - 0.043 13.5 2.3 0.062 13.0 2.3 1.2 1 0 0 1 1 1 0 Colipase, N-terminal domain Metallothio_PEC PF02068.16 NODE_90011_length_180_cov_0.910345_g82070_i0forward_frame_3 - 0.0058 16.9 4.2 0.0072 16.6 4.2 1.1 1 0 0 1 1 1 1 Plant PEC family metallothionein Ammonium_transp PF00909.21 NODE_90008_length_180_cov_0.931034_g82067_i0forward_frame_3 - 0.0021 16.8 0.3 0.0025 16.6 0.3 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family FA_hydroxylase PF04116.13 NODE_90001_length_180_cov_0.986207_g82060_i0forward_frame_3 - 0.025 14.9 0.8 0.026 14.9 0.8 1.0 1 0 0 1 1 1 0 Fatty acid hydroxylase superfamily RCC1_2 PF13540.6 NODE_89999_length_180_cov_1.000000_g82058_i0reverse_frame_3 - 1e-07 31.6 3.3 0.00014 21.5 0.1 2.3 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat DUF3402 PF11882.8 NODE_89997_length_180_cov_1.013793_g82056_i0reverse_frame_2 - 0.034 13.3 1.1 0.029 13.5 1.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3402) Pentapeptide PF00805.22 NODE_89996_length_180_cov_1.013793_g82055_i0reverse_frame_3 - 0.11 12.2 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Pentapeptide repeats (8 copies) Ephrin_rec_like PF07699.13 NODE_89996_length_180_cov_1.013793_g82055_i0reverse_frame_2 - 0.048 13.4 0.1 0.064 13.0 0.1 1.2 1 0 0 1 1 1 0 Putative ephrin-receptor like Tudor_3 PF18115.1 NODE_89995_length_180_cov_1.013793_g82054_i0forward_frame_2 - 0.18 11.6 0.4 0.24 11.3 0.4 1.3 1 1 0 1 1 1 0 DNA repair protein Crb2 Tudor domain Pellino PF04710.14 NODE_89992_length_180_cov_1.020690_g82051_i0forward_frame_2 - 0.16 10.6 0.1 0.18 10.4 0.1 1.0 1 0 0 1 1 1 0 Pellino zf-TFIIB PF13453.6 NODE_89988_length_180_cov_1.034483_g82047_i0reverse_frame_3 - 0.0057 16.0 0.1 0.0075 15.6 0.1 1.2 1 0 0 1 1 1 1 Transcription factor zinc-finger ATX_III PF08098.11 NODE_89983_length_180_cov_1.062069_g82042_i0reverse_frame_2 - 0.0051 16.8 7.6 0.0086 16.1 7.6 1.4 1 0 0 1 1 1 1 Anemonia sulcata toxin III family KAAG1 PF15354.6 NODE_89983_length_180_cov_1.062069_g82042_i0forward_frame_3 - 0.43 11.1 2.6 16 6.1 0.3 2.0 1 1 1 2 2 2 0 Kidney-associated antigen 1 dCMP_cyt_deam_1 PF00383.23 NODE_89980_length_180_cov_1.068966_g82039_i0forward_frame_3 - 0.28 11.1 2.6 0.32 10.9 2.6 1.2 1 0 0 1 1 1 0 Cytidine and deoxycytidylate deaminase zinc-binding region zf-C2HC_2 PF13913.6 NODE_89980_length_180_cov_1.068966_g82039_i0forward_frame_3 - 0.4 10.6 7.2 2.8 7.9 1.1 2.5 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Mfa1 PF17445.2 NODE_89979_length_180_cov_1.068966_g82038_i0reverse_frame_3 - 0.079 13.0 0.6 0.079 13.0 0.6 1.9 2 1 0 2 2 2 0 Mating factor A1 Ank_3 PF13606.6 NODE_89978_length_180_cov_1.068966_g82037_i0reverse_frame_2 - 0.021 15.4 0.1 0.56 10.9 0.0 2.1 2 0 0 2 2 2 0 Ankyrin repeat Ank_2 PF12796.7 NODE_89978_length_180_cov_1.068966_g82037_i0reverse_frame_2 - 0.023 15.3 0.0 0.029 15.0 0.0 1.1 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Pax7 PF12360.8 NODE_89977_length_180_cov_1.068966_g82036_i0forward_frame_2 - 0.04 14.1 0.7 0.05 13.8 0.7 1.2 1 0 0 1 1 1 0 Paired box protein 7 DUF2619 PF10942.8 NODE_89977_length_180_cov_1.068966_g82036_i0forward_frame_2 - 0.23 11.5 0.0 0.29 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2619) TSP_3 PF02412.18 NODE_89972_length_180_cov_1.075862_g82031_i0reverse_frame_2 - 0.2 11.3 0.9 0.52 10.0 0.0 1.8 2 0 0 2 2 2 0 Thrombospondin type 3 repeat TypeIII_RM_meth PF12564.8 NODE_89963_length_180_cov_1.089655_g82022_i0forward_frame_2 - 0.1 12.8 0.5 0.14 12.3 0.5 1.2 1 0 0 1 1 1 0 Type III restriction/modification enzyme methylation subunit AZUL PF16558.5 NODE_89961_length_180_cov_1.089655_g82020_i0forward_frame_2 - 0.89 9.8 6.3 1.2 9.4 6.3 1.3 1 0 0 1 1 1 0 Amino-terminal Zinc-binding domain of ubiquitin ligase E3A MINDY_DUB PF04424.13 NODE_89957_length_180_cov_1.089655_g82016_i0forward_frame_3 - 0.069 13.2 0.0 0.075 13.1 0.0 1.1 1 0 0 1 1 1 0 MINDY deubiquitinase zf-TRM13_CCCH PF11722.8 NODE_89957_length_180_cov_1.089655_g82016_i0forward_frame_2 - 0.0061 16.3 1.1 0.0061 16.3 1.1 2.0 2 0 0 2 2 2 1 CCCH zinc finger in TRM13 protein TMEM232 PF15877.5 NODE_89957_length_180_cov_1.089655_g82016_i0forward_frame_2 - 0.039 12.9 0.8 0.045 12.8 0.8 1.1 1 0 0 1 1 1 0 Transmembrane protein family 232 RcpC PF16976.5 NODE_89954_length_180_cov_1.089655_g82013_i0reverse_frame_2 - 0.089 12.8 0.0 0.09 12.8 0.0 1.0 1 0 0 1 1 1 0 Flp pilus assembly protein RcpC/CpaB Sugar_tr PF00083.24 NODE_89951_length_180_cov_1.096552_g82010_i0reverse_frame_2 - 3.9e-14 52.4 7.2 4.1e-14 52.3 7.2 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_89951_length_180_cov_1.096552_g82010_i0reverse_frame_2 - 5.2e-10 38.8 8.5 5.5e-10 38.7 8.5 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_5 PF05631.14 NODE_89951_length_180_cov_1.096552_g82010_i0reverse_frame_2 - 0.003 16.5 0.2 0.0035 16.3 0.2 1.0 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM MFS_2 PF13347.6 NODE_89951_length_180_cov_1.096552_g82010_i0reverse_frame_2 - 0.0088 14.6 0.9 0.009 14.6 0.9 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF826 PF05696.11 NODE_89943_length_180_cov_1.096552_g82002_i0forward_frame_3 - 0.17 12.0 0.1 0.2 11.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF826) Popeye PF04831.13 NODE_89942_length_180_cov_1.096552_g82001_i0forward_frame_3 - 0.084 13.1 2.0 0.079 13.1 2.0 1.1 1 0 0 1 1 1 0 Popeye protein conserved region FYVE_2 PF02318.16 NODE_89942_length_180_cov_1.096552_g82001_i0forward_frame_2 - 0.12 12.6 2.4 0.12 12.6 2.4 1.2 1 0 0 1 1 1 0 FYVE-type zinc finger UCH_C PF18031.1 NODE_89939_length_180_cov_1.096552_g81998_i0forward_frame_3 - 0.16 11.9 1.5 0.27 11.1 0.1 2.1 2 1 1 3 3 3 0 Ubiquitin carboxyl-terminal hydrolases CFAP91 PF14738.6 NODE_89937_length_180_cov_1.096552_g81996_i0reverse_frame_2 - 0.019 15.0 0.0 0.021 14.9 0.0 1.0 1 0 0 1 1 1 0 Cilia- and flagella-associated protein 91 DUF4462 PF14692.6 NODE_89931_length_180_cov_1.096552_g81990_i0reverse_frame_3 - 0.097 12.2 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) SEFIR PF08357.11 NODE_89930_length_180_cov_1.096552_g81989_i0forward_frame_3 - 0.036 14.3 0.0 0.04 14.2 0.0 1.1 1 0 0 1 1 1 0 SEFIR domain DUF1137 PF06587.11 NODE_89929_length_180_cov_1.096552_g81988_i0forward_frame_3 - 0.029 14.4 0.0 0.034 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1137) NinE PF05322.11 NODE_89928_length_180_cov_1.096552_g81987_i0forward_frame_2 - 0.029 14.3 0.2 0.044 13.7 0.2 1.2 1 0 0 1 1 1 0 NINE Protein DUF2614 PF11023.8 NODE_89924_length_180_cov_1.096552_g81983_i0reverse_frame_3 - 0.1 12.7 0.2 0.13 12.4 0.2 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Spt46 PF17734.1 NODE_89923_length_180_cov_1.096552_g81982_i0reverse_frame_2 - 0.023 14.5 0.1 0.023 14.5 0.1 1.0 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 Prok_Ub PF14454.6 NODE_89922_length_180_cov_1.096552_g81981_i0forward_frame_2 - 0.1 12.3 0.0 0.15 11.8 0.0 1.3 1 1 0 1 1 1 0 Prokaryotic Ubiquitin Tachylectin PF14517.6 NODE_89921_length_180_cov_1.096552_g81980_i0reverse_frame_3 - 0.062 12.8 0.1 0.062 12.8 0.1 1.0 1 0 0 1 1 1 0 Tachylectin DUF4726 PF15855.5 NODE_89918_length_180_cov_1.103448_g81977_i0forward_frame_2 - 0.16 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4726) HGWP PF03578.15 NODE_89914_length_180_cov_1.103448_g81973_i0forward_frame_3 - 5.9 6.5 5.8 1.7 8.2 0.4 2.3 2 0 0 2 2 2 0 HGWP repeat MSL2-CXC PF16682.5 NODE_89911_length_180_cov_1.103448_g81970_i0forward_frame_3 - 0.015 15.4 12.9 0.019 15.1 12.9 1.2 1 0 0 1 1 1 0 CXC domain of E3 ubiquitin-protein ligase MSL2 ATP1G1_PLM_MAT8 PF02038.16 NODE_89911_length_180_cov_1.103448_g81970_i0forward_frame_3 - 0.021 14.2 2.1 0.021 14.2 2.1 1.8 1 1 1 2 2 2 0 ATP1G1/PLM/MAT8 family zf-P11 PF03854.14 NODE_89910_length_180_cov_1.103448_g81969_i0forward_frame_3 - 0.009 15.7 0.2 0.01 15.5 0.2 1.1 1 0 0 1 1 1 1 P-11 zinc finger Apq12 PF12716.7 NODE_89910_length_180_cov_1.103448_g81969_i0forward_frame_3 - 0.018 15.0 1.0 0.14 12.1 0.0 2.0 2 0 0 2 2 2 0 Nuclear pore assembly and biogenesis PAD_porph PF04371.15 NODE_89909_length_180_cov_1.103448_g81968_i0forward_frame_2 - 0.00015 21.2 0.1 0.00017 21.0 0.1 1.0 1 0 0 1 1 1 1 Porphyromonas-type peptidyl-arginine deiminase Cas_CXXC_CXXC PF09706.10 NODE_89903_length_180_cov_1.103448_g81962_i0reverse_frame_3 - 0.19 12.0 0.0 0.22 11.8 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_CXXC_CXXC) C4bp_oligo PF18453.1 NODE_89899_length_180_cov_1.103448_g81958_i0reverse_frame_2 - 0.062 13.5 0.0 0.072 13.3 0.0 1.1 1 0 0 1 1 1 0 Oligomerization domain of C4b-binding protein alpha DUF2890 PF11081.8 NODE_89896_length_180_cov_1.103448_g81955_i0reverse_frame_3 - 0.065 13.3 0.1 0.065 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2890) WBP-1 PF11669.8 NODE_89895_length_180_cov_1.103448_g81954_i0reverse_frame_2 - 0.029 15.0 0.8 0.032 14.9 0.8 1.0 1 0 0 1 1 1 0 WW domain-binding protein 1 ABC_membrane PF00664.23 NODE_89893_length_180_cov_1.103448_g81952_i0reverse_frame_3 - 0.0072 16.0 0.0 0.0074 16.0 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region KAP PF05804.12 NODE_89889_length_180_cov_1.103448_g81948_i0forward_frame_3 - 0.048 11.8 0.2 0.05 11.8 0.2 1.0 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) ATP-synt_ab PF00006.25 NODE_89889_length_180_cov_1.103448_g81948_i0forward_frame_2 - 8.7e-17 61.5 0.0 9e-17 61.4 0.0 1.0 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain VWA_N2 PF16164.5 NODE_89888_length_180_cov_1.103448_g81947_i0reverse_frame_2 - 0.071 13.3 0.1 0.075 13.2 0.1 1.1 1 0 0 1 1 1 0 VWA N-terminal DUF4449 PF14613.6 NODE_89884_length_180_cov_1.103448_g81943_i0forward_frame_2 - 0.16 12.1 3.2 0.18 11.9 3.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) zf-BED PF02892.15 NODE_89880_length_180_cov_1.103448_g81939_i0forward_frame_3 - 0.35 10.9 1.7 0.71 9.9 1.7 1.6 1 1 0 1 1 1 0 BED zinc finger Fer4_4 PF12800.7 NODE_89873_length_180_cov_1.103448_g81932_i0forward_frame_2 - 3.4 8.4 11.3 0.53 10.9 4.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Lentiviral_Tat PF02998.14 NODE_89872_length_180_cov_1.103448_g81931_i0reverse_frame_3 - 0.0044 17.0 0.0 0.0053 16.8 0.0 1.0 1 0 0 1 1 1 1 Lentiviral Tat protein Rossmann-like PF10727.9 NODE_89870_length_180_cov_1.103448_g81929_i0reverse_frame_3 - 0.046 13.6 0.0 0.046 13.6 0.0 1.0 1 0 0 1 1 1 0 Rossmann-like domain PPR_3 PF13812.6 NODE_89869_length_180_cov_1.103448_g81928_i0reverse_frame_3 - 0.19 11.8 0.0 0.28 11.3 0.0 1.2 1 0 0 1 1 1 0 Pentatricopeptide repeat domain Peptidase_C1 PF00112.23 NODE_89864_length_180_cov_1.103448_g81923_i0forward_frame_2 - 0.048 13.8 0.3 0.053 13.6 0.3 1.0 1 0 0 1 1 1 0 Papain family cysteine protease Rad50_zn_hook PF04423.14 NODE_89858_length_180_cov_1.103448_g81917_i0reverse_frame_2 - 0.027 14.3 1.3 0.044 13.6 1.3 1.4 1 0 0 1 1 1 0 Rad50 zinc hook motif zf-HIT PF04438.16 NODE_89858_length_180_cov_1.103448_g81917_i0reverse_frame_2 - 0.084 12.8 2.0 0.11 12.4 2.0 1.3 1 0 0 1 1 1 0 HIT zinc finger DUF3767 PF12597.8 NODE_89857_length_180_cov_1.103448_g81916_i0forward_frame_2 - 0.021 14.6 0.0 0.023 14.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) zf-RanBP PF00641.18 NODE_89851_length_180_cov_1.103448_g81910_i0reverse_frame_2 - 0.53 9.6 8.1 0.79 9.1 8.1 1.2 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others Nudc_N PF14050.6 NODE_89847_length_180_cov_1.103448_g81906_i0forward_frame_2 - 1.2e-06 28.4 0.0 1.3e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. Mg_trans_NIPA PF05653.14 NODE_89845_length_180_cov_1.103448_g81904_i0reverse_frame_3 - 0.021 13.9 2.4 0.022 13.9 2.4 1.0 1 0 0 1 1 1 0 Magnesium transporter NIPA Sugar_tr PF00083.24 NODE_89840_length_180_cov_1.103448_g81899_i0forward_frame_2 - 1.1e-08 34.4 2.5 1.3e-08 34.1 2.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 NODE_89840_length_180_cov_1.103448_g81899_i0forward_frame_2 - 0.0043 16.0 0.6 0.0044 16.0 0.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily YccF PF03733.13 NODE_89839_length_180_cov_1.103448_g81898_i0forward_frame_2 - 0.065 14.0 0.5 0.1 13.3 0.5 1.2 1 0 0 1 1 1 0 Inner membrane component domain DUF4330 PF14221.6 NODE_89836_length_180_cov_1.103448_g81895_i0reverse_frame_3 - 0.019 15.2 0.0 0.019 15.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) PV-1 PF06637.11 NODE_89836_length_180_cov_1.103448_g81895_i0reverse_frame_3 - 0.042 12.7 0.1 0.045 12.6 0.1 1.0 1 0 0 1 1 1 0 PV-1 protein (PLVAP) Baculo_11_kDa PF06143.11 NODE_89836_length_180_cov_1.103448_g81895_i0reverse_frame_3 - 0.079 12.6 0.2 0.089 12.4 0.2 1.1 1 0 0 1 1 1 0 Baculovirus 11 kDa family DUF4379 PF14311.6 NODE_89835_length_180_cov_1.103448_g81894_i0reverse_frame_2 - 0.0024 18.2 0.5 0.0037 17.6 0.5 1.5 1 1 0 1 1 1 1 Probable Zinc-ribbon domain RLI PF04068.15 NODE_89830_length_180_cov_1.103448_g81889_i0reverse_frame_3 - 0.039 13.8 0.0 0.063 13.1 0.0 1.3 1 0 0 1 1 1 0 Possible Fer4-like domain in RNase L inhibitor, RLI TTL PF03133.15 NODE_89830_length_180_cov_1.103448_g81889_i0forward_frame_3 - 0.00044 19.5 0.0 0.00044 19.5 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family Eclosion PF04736.12 NODE_89828_length_180_cov_1.103448_g81887_i0forward_frame_2 - 0.23 11.2 1.9 0.42 10.4 0.9 1.8 1 1 1 2 2 2 0 Eclosion hormone DUF3377 PF11857.8 NODE_89813_length_180_cov_1.144828_g81872_i0reverse_frame_2 - 0.14 12.1 1.8 0.19 11.7 1.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) Qua1 PF16274.5 NODE_89809_length_180_cov_1.151724_g81868_i0reverse_frame_2 - 0.12 12.2 0.0 0.16 11.8 0.0 1.1 1 0 0 1 1 1 0 Qua1 domain LmjF365940-deam PF14421.6 NODE_89808_length_180_cov_1.158621_g81867_i0forward_frame_3 - 0.081 12.5 0.8 0.084 12.5 0.8 1.0 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases DUF5530 PF17670.1 NODE_89807_length_180_cov_1.158621_g81866_i0forward_frame_2 - 0.19 11.5 0.0 0.2 11.4 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5530) OS-D PF03392.13 NODE_89804_length_180_cov_1.165517_g81863_i0forward_frame_2 - 0.096 12.8 0.1 0.11 12.6 0.1 1.2 1 0 0 1 1 1 0 Insect pheromone-binding family, A10/OS-D DUF3185 PF11381.8 NODE_89802_length_180_cov_1.172414_g81861_i0reverse_frame_3 - 0.13 12.3 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) NAD2 PF18782.1 NODE_89797_length_180_cov_1.193103_g81856_i0reverse_frame_2 - 0.044 13.9 0.1 0.044 13.9 0.1 1.1 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 zf_CCCH_4 PF18345.1 NODE_89796_length_180_cov_1.193103_g81855_i0forward_frame_2 - 0.0025 17.8 0.9 0.0025 17.8 0.9 1.7 2 0 0 2 2 2 1 Zinc finger domain Methyltransf_13 PF08421.11 NODE_89794_length_180_cov_1.200000_g81853_i0forward_frame_3 - 0.074 13.3 0.5 0.24 11.7 0.5 1.8 1 1 0 1 1 1 0 Putative zinc binding domain DUF4506 PF14958.6 NODE_89792_length_180_cov_1.206897_g81851_i0reverse_frame_3 - 0.043 13.3 0.1 0.05 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4506) RnaseA PF00074.20 NODE_89791_length_180_cov_1.206897_g81850_i0forward_frame_2 - 0.071 13.6 0.1 0.075 13.5 0.1 1.1 1 0 0 1 1 1 0 Pancreatic ribonuclease 7TM_GPCR_Srd PF10317.9 NODE_89789_length_180_cov_1.206897_g81848_i0forward_frame_2 - 0.037 13.2 0.0 0.04 13.1 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd IDO PF01231.18 NODE_89787_length_180_cov_1.206897_g81846_i0forward_frame_2 - 0.21 10.3 0.0 0.22 10.3 0.0 1.0 1 0 0 1 1 1 0 Indoleamine 2,3-dioxygenase MurJ PF03023.14 NODE_89786_length_180_cov_1.206897_g81845_i0forward_frame_2 - 3.3e-09 35.9 0.5 4.8e-09 35.3 0.5 1.3 1 0 0 1 1 1 1 Lipid II flippase MurJ XhlA PF10779.9 NODE_89771_length_180_cov_1.262069_g81830_i0reverse_frame_2 - 0.47 10.7 8.0 0.21 11.8 2.1 2.1 1 1 1 2 2 2 0 Haemolysin XhlA TraP PF07296.11 NODE_89768_length_180_cov_1.268966_g81827_i0reverse_frame_2 - 0.12 11.5 0.0 0.12 11.5 0.0 1.0 1 0 0 1 1 1 0 TraP protein TTL PF03133.15 NODE_89762_length_180_cov_1.268966_g81821_i0forward_frame_2 - 0.011 14.9 0.0 0.011 14.9 0.0 1.0 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family Lamprin PF06403.11 NODE_89760_length_180_cov_1.275862_g81819_i0forward_frame_3 - 0.0047 16.9 4.8 0.0055 16.7 4.8 1.1 1 0 0 1 1 1 1 Lamprin Lamprin PF06403.11 NODE_89760_length_180_cov_1.275862_g81819_i0forward_frame_2 - 0.015 15.2 1.4 0.017 15.1 1.4 1.1 1 0 0 1 1 1 0 Lamprin Fea1 PF07692.11 NODE_89758_length_180_cov_1.275862_g81817_i0forward_frame_2 - 0.13 11.2 0.1 0.13 11.2 0.1 1.0 1 0 0 1 1 1 0 Low iron-inducible periplasmic protein DUF1154 PF06631.11 NODE_89755_length_180_cov_1.282759_g81814_i0forward_frame_2 - 0.17 11.9 2.5 1.6 8.8 1.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1154) F-box PF00646.33 NODE_89754_length_180_cov_1.282759_g81813_i0reverse_frame_3 - 0.94 9.4 3.4 1.4 8.9 3.4 1.3 1 0 0 1 1 1 0 F-box domain Inhibitor_I67 PF11405.8 NODE_89750_length_180_cov_1.296552_g81809_i0forward_frame_2 - 0.036 14.3 0.4 0.074 13.3 0.3 1.5 2 0 0 2 2 2 0 Bromelain inhibitor VI Late_protein_L2 PF00513.18 NODE_89749_length_180_cov_1.296552_g81808_i0reverse_frame_3 - 0.04 12.9 0.1 0.042 12.9 0.1 1.0 1 0 0 1 1 1 0 Late Protein L2 Vanabin-2 PF11437.8 NODE_89743_length_180_cov_1.324138_g81802_i0reverse_frame_3 - 0.0016 18.6 2.2 0.0017 18.5 2.2 1.0 1 0 0 1 1 1 1 Vanadium-binding protein 2 DUF1125 PF06563.11 NODE_89739_length_180_cov_1.344828_g81798_i0forward_frame_3 - 0.067 13.1 1.2 0.093 12.6 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1125) PGM_PMM_II PF02879.16 NODE_89734_length_180_cov_1.358621_g81793_i0reverse_frame_2 - 2.3e-10 41.0 0.1 2.5e-10 40.9 0.1 1.1 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 5-nucleotidase PF06189.12 NODE_89734_length_180_cov_1.358621_g81793_i0reverse_frame_2 - 0.047 12.6 0.1 0.047 12.6 0.1 1.0 1 0 0 1 1 1 0 5'-nucleotidase HigB-like_toxin PF05015.13 NODE_89731_length_180_cov_1.365517_g81790_i0reverse_frame_2 - 0.018 15.5 0.6 0.021 15.2 0.6 1.1 1 0 0 1 1 1 0 RelE-like toxin of type II toxin-antitoxin system HigB Lipoxygenase PF00305.19 NODE_89731_length_180_cov_1.365517_g81790_i0reverse_frame_2 - 0.047 12.1 0.1 0.049 12.0 0.1 1.0 1 0 0 1 1 1 0 Lipoxygenase PDDEXK_5 PF11645.8 NODE_89725_length_180_cov_1.372414_g81784_i0forward_frame_2 - 0.094 12.7 0.1 0.1 12.6 0.1 1.0 1 0 0 1 1 1 0 PD-(D/E)XK endonuclease Urate_ox_N PF06181.11 NODE_89724_length_180_cov_1.372414_g81783_i0reverse_frame_3 - 0.0081 15.5 0.0 0.0098 15.3 0.0 1.0 1 0 0 1 1 1 1 Urate oxidase N-terminal Methyltransf_7 PF03492.15 NODE_89722_length_180_cov_1.372414_g81781_i0reverse_frame_3 - 0.096 11.9 0.9 0.094 11.9 0.9 1.0 1 0 0 1 1 1 0 SAM dependent carboxyl methyltransferase YMF19 PF02326.15 NODE_89722_length_180_cov_1.372414_g81781_i0reverse_frame_2 - 1.7 9.5 6.5 2 9.3 6.5 1.1 1 0 0 1 1 1 0 Plant ATP synthase F0 FixP_N PF14715.6 NODE_89722_length_180_cov_1.372414_g81781_i0reverse_frame_2 - 2.4 8.0 5.4 3.7 7.4 5.4 1.4 1 1 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks462.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks462.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks462.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks462.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:37:37 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4215 PF13948.6 NODE_89715_length_180_cov_1.379310_g81774_i0reverse_frame_2 - 0.0002 21.7 2.2 0.0003 21.2 2.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4215) Opiods_neuropep PF01160.18 NODE_89715_length_180_cov_1.379310_g81774_i0reverse_frame_2 - 0.033 14.3 1.1 0.044 13.9 1.1 1.2 1 0 0 1 1 1 0 Vertebrate endogenous opioids neuropeptide HCMV_UL124 PF17609.2 NODE_89698_length_180_cov_1.413793_g81757_i0reverse_frame_3 - 0.16 12.2 2.8 0.2 11.9 2.8 1.1 1 0 0 1 1 1 0 Family of unknown function MHYT PF03707.16 NODE_89698_length_180_cov_1.413793_g81757_i0forward_frame_3 - 0.59 10.3 6.3 1.8 8.8 6.3 1.8 1 1 0 1 1 1 0 Bacterial signalling protein N terminal repeat COesterase PF00135.28 NODE_89696_length_180_cov_1.420690_g81755_i0reverse_frame_3 - 0.26 10.1 0.0 0.31 9.8 0.0 1.0 1 0 0 1 1 1 0 Carboxylesterase family DUF2982 PF11201.8 NODE_89695_length_180_cov_1.420690_g81754_i0reverse_frame_3 - 0.15 11.6 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2982) Ada_Zn_binding PF02805.16 NODE_89692_length_180_cov_1.434483_g81751_i0reverse_frame_2 - 0.061 13.4 0.7 0.077 13.0 0.7 1.2 1 0 0 1 1 1 0 Metal binding domain of Ada POT1 PF02765.17 NODE_89689_length_180_cov_1.455172_g81748_i0forward_frame_3 - 0.045 13.6 0.0 0.05 13.4 0.0 1.0 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 PH_17 PF18012.1 NODE_89686_length_180_cov_1.468966_g81745_i0reverse_frame_2 - 0.021 14.6 0.6 0.026 14.3 0.6 1.2 1 0 0 1 1 1 0 PH domain SK_channel PF03530.14 NODE_89682_length_180_cov_1.496552_g81741_i0forward_frame_2 - 0.022 14.7 7.4 0.024 14.6 7.4 1.1 1 0 0 1 1 1 0 Calcium-activated SK potassium channel Orf78 PF06024.12 NODE_89682_length_180_cov_1.496552_g81741_i0forward_frame_2 - 8.2 6.8 6.4 8.5 6.7 6.4 1.2 1 0 0 1 1 1 0 Orf78 (ac78) NOP5NT PF08156.13 NODE_89681_length_180_cov_1.496552_g81740_i0reverse_frame_2 - 0.042 14.2 0.0 0.052 13.9 0.0 1.1 1 0 0 1 1 1 0 NOP5NT (NUC127) domain IFNGR1 PF07140.11 NODE_89681_length_180_cov_1.496552_g81740_i0reverse_frame_2 - 0.044 13.9 2.0 0.049 13.7 2.0 1.0 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) DED PF01335.21 NODE_89680_length_180_cov_1.503448_g81739_i0forward_frame_2 - 0.0059 16.9 0.2 0.009 16.3 0.2 1.3 1 0 0 1 1 1 1 Death effector domain HEAT_2 PF13646.6 NODE_89680_length_180_cov_1.503448_g81739_i0forward_frame_2 - 0.0096 16.3 0.0 0.01 16.2 0.0 1.0 1 0 0 1 1 1 1 HEAT repeats SAMP PF05924.11 NODE_89679_length_180_cov_1.510345_g81738_i0reverse_frame_3 - 0.2 11.0 0.1 0.2 11.0 0.1 1.8 2 0 0 2 2 2 0 SAMP Motif BRCT_2 PF16589.5 NODE_89678_length_180_cov_1.524138_g81737_i0forward_frame_2 - 3.2e-06 27.4 0.1 3.9e-06 27.2 0.1 1.2 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain DMRT-like PF15791.5 NODE_89673_length_180_cov_1.551724_g81732_i0forward_frame_3 - 0.058 13.8 0.4 0.065 13.7 0.4 1.1 1 0 0 1 1 1 0 Doublesex-and mab-3-related transcription factor C1 and C2 Peptidase_C70 PF12385.8 NODE_89665_length_180_cov_1.600000_g81724_i0reverse_frame_3 - 0.018 15.0 0.1 0.019 15.0 0.1 1.1 1 0 0 1 1 1 0 Papain-like cysteine protease AvrRpt2 ATP-synt_Eps PF04627.13 NODE_89660_length_180_cov_1.613793_g81719_i0reverse_frame_3 - 0.043 13.8 0.2 0.092 12.7 0.1 1.6 1 1 1 2 2 2 0 Mitochondrial ATP synthase epsilon chain DUF4763 PF15960.5 NODE_89657_length_180_cov_1.613793_g81716_i0reverse_frame_2 - 0.0053 16.1 0.7 0.006 15.9 0.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) DUF2575 PF10837.8 NODE_89657_length_180_cov_1.613793_g81716_i0forward_frame_3 - 0.0075 16.6 0.6 0.0089 16.3 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2575) Pox_VLTF3 PF04947.14 NODE_89651_length_180_cov_1.634483_g81710_i0reverse_frame_3 - 0.01 15.6 0.2 0.01 15.6 0.2 1.1 1 0 0 1 1 1 0 Poxvirus Late Transcription Factor VLTF3 like TMEM132D_C PF15706.5 NODE_89651_length_180_cov_1.634483_g81710_i0forward_frame_2 - 0.99 9.2 4.6 0.79 9.5 3.9 1.3 1 1 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term WBP-1 PF11669.8 NODE_89651_length_180_cov_1.634483_g81710_i0forward_frame_2 - 1.1 10.0 4.3 1.2 9.8 4.3 1.1 1 0 0 1 1 1 0 WW domain-binding protein 1 Nup188_C PF18378.1 NODE_89647_length_180_cov_1.641379_g81706_i0forward_frame_3 - 0.086 11.7 0.0 0.092 11.6 0.0 1.0 1 0 0 1 1 1 0 Nuclear pore protein NUP188 C-terminal domain DUF1656 PF07869.12 NODE_89646_length_180_cov_1.641379_g81705_i0forward_frame_2 - 0.08 13.0 0.2 0.1 12.6 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1656) HEAT PF02985.22 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.0013 18.8 0.0 0.002 18.2 0.0 1.4 1 0 0 1 1 1 1 HEAT repeat DAHP_synth_2 PF01474.16 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.011 14.3 0.0 0.011 14.3 0.0 1.0 1 0 0 1 1 1 0 Class-II DAHP synthetase family CadC_C1 PF18500.1 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.028 14.6 0.0 0.031 14.4 0.0 1.0 1 0 0 1 1 1 0 CadC C-terminal domain 1 TIMELESS PF04821.14 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.071 12.4 0.0 0.081 12.2 0.0 1.0 1 0 0 1 1 1 0 Timeless protein CARD_2 PF16739.5 NODE_89645_length_180_cov_1.641379_g81704_i0forward_frame_3 - 0.097 12.7 0.1 0.12 12.4 0.1 1.3 1 1 0 1 1 1 0 Caspase recruitment domain OSTMP1 PF09777.9 NODE_89642_length_180_cov_1.648276_g81701_i0forward_frame_3 - 0.13 11.6 0.1 0.13 11.6 0.1 1.0 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor OTT_1508_deam PF14441.6 NODE_89635_length_180_cov_1.648276_g81694_i0reverse_frame_3 - 0.02 14.9 2.5 0.02 14.9 2.5 1.3 1 1 0 1 1 1 0 OTT_1508-like deaminase Ribosomal_60s PF00428.19 NODE_89635_length_180_cov_1.648276_g81694_i0forward_frame_3 - 0.22 12.1 6.0 0.27 11.9 6.0 1.1 1 0 0 1 1 1 0 60s Acidic ribosomal protein Arf PF00025.21 NODE_89634_length_180_cov_1.648276_g81693_i0reverse_frame_2 - 0.11 11.9 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 ADP-ribosylation factor family ER-remodelling PF14755.6 NODE_89632_length_180_cov_1.648276_g81691_i0reverse_frame_2 - 0.038 14.3 1.6 0.04 14.2 1.6 1.1 1 0 0 1 1 1 0 Intracellular membrane remodeller SPEG_u2 PF16650.5 NODE_89630_length_180_cov_1.655172_g81689_i0forward_frame_2 - 0.024 14.8 1.7 0.03 14.5 1.7 1.3 1 1 0 1 1 1 0 Unstructured region on SPEG complex protein Sec3-PIP2_bind PF15277.6 NODE_89630_length_180_cov_1.655172_g81689_i0forward_frame_2 - 0.12 12.5 0.0 0.14 12.3 0.0 1.1 1 0 0 1 1 1 0 Exocyst complex component SEC3 N-terminal PIP2 binding PH DUF5490 PF17593.2 NODE_89615_length_180_cov_1.655172_g81674_i0reverse_frame_2 - 0.11 12.5 0.8 0.16 12.0 0.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5490) HIT PF01230.23 NODE_89614_length_180_cov_1.655172_g81673_i0reverse_frame_2 - 6.9e-07 29.9 0.0 7.2e-07 29.9 0.0 1.0 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 NODE_89614_length_180_cov_1.655172_g81673_i0reverse_frame_2 - 1.5e-06 28.7 0.0 1.6e-06 28.6 0.0 1.0 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding ATP_bind_3 PF01171.20 NODE_89611_length_180_cov_1.675862_g81670_i0forward_frame_2 - 0.001 18.8 0.0 0.001 18.8 0.0 1.1 1 0 0 1 1 1 1 PP-loop family Peptidase_C78 PF07910.13 NODE_89608_length_180_cov_1.689655_g81667_i0forward_frame_3 - 0.11 11.9 0.0 0.12 11.9 0.0 1.0 1 0 0 1 1 1 0 Peptidase family C78 Pkinase PF00069.25 NODE_89606_length_180_cov_1.696552_g81665_i0reverse_frame_2 - 1.2e-11 44.5 0.0 1.2e-11 44.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_89606_length_180_cov_1.696552_g81665_i0reverse_frame_2 - 1.2e-07 31.3 0.0 1.2e-07 31.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pox_ser-thr_kin PF05445.11 NODE_89606_length_180_cov_1.696552_g81665_i0reverse_frame_2 - 0.00093 18.3 0.0 0.00095 18.2 0.0 1.0 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase APH PF01636.23 NODE_89606_length_180_cov_1.696552_g81665_i0reverse_frame_2 - 0.0049 16.8 0.0 0.0049 16.8 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family PRIMA1 PF16101.5 NODE_89606_length_180_cov_1.696552_g81665_i0forward_frame_2 - 0.014 15.4 2.6 0.016 15.2 2.6 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 TMEM156 PF15106.6 NODE_89604_length_180_cov_1.710345_g81663_i0reverse_frame_2 - 0.51 9.7 2.1 0.52 9.7 2.1 1.1 1 0 0 1 1 1 0 TMEM156 protein family DUF5408 PF17402.2 NODE_89596_length_180_cov_1.751724_g81655_i0reverse_frame_3 - 0.059 13.3 0.9 0.086 12.7 0.9 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5408) Coatomer_b_Cpla PF14806.6 NODE_89591_length_180_cov_1.772414_g81650_i0reverse_frame_3 - 0.11 12.5 0.2 0.12 12.4 0.2 1.1 1 0 0 1 1 1 0 Coatomer beta subunit appendage platform EF-hand_5 PF13202.6 NODE_89591_length_180_cov_1.772414_g81650_i0forward_frame_3 - 0.0051 16.3 0.9 0.01 15.3 0.1 2.0 2 1 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 NODE_89591_length_180_cov_1.772414_g81650_i0forward_frame_3 - 0.068 13.1 0.8 0.15 12.1 0.8 1.7 1 1 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 NODE_89591_length_180_cov_1.772414_g81650_i0forward_frame_3 - 0.18 11.5 0.4 0.18 11.5 0.4 1.9 2 1 0 2 2 2 0 EF hand DUF3756 PF12581.8 NODE_89590_length_180_cov_1.786207_g81649_i0forward_frame_3 - 0.15 12.0 0.1 0.21 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3756) BAP PF06639.11 NODE_89588_length_180_cov_1.793103_g81647_i0forward_frame_3 - 0.051 13.9 0.5 0.062 13.7 0.5 1.1 1 0 0 1 1 1 0 Basal layer antifungal peptide (BAP) DUF971 PF06155.12 NODE_89584_length_180_cov_1.841379_g81643_i0forward_frame_2 - 0.091 13.4 0.5 0.11 13.2 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF971) DUF2203 PF09969.9 NODE_89584_length_180_cov_1.841379_g81643_i0forward_frame_2 - 0.11 13.2 0.1 0.14 12.9 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) MAPEG PF01124.18 NODE_89579_length_180_cov_1.868966_g81638_i0reverse_frame_3 - 0.12 12.3 3.4 0.13 12.2 3.4 1.0 1 0 0 1 1 1 0 MAPEG family Ago_N_1 PF18351.1 NODE_89578_length_180_cov_1.868966_g81637_i0forward_frame_2 - 0.066 13.6 0.1 0.07 13.6 0.1 1.1 1 0 0 1 1 1 0 Fungal Argonaute N-terminal domain CD225 PF04505.12 NODE_89570_length_180_cov_1.917241_g81629_i0reverse_frame_3 - 2 8.6 4.5 4.4 7.5 4.5 1.6 1 1 0 1 1 1 0 Interferon-induced transmembrane protein Fic_N PF13784.6 NODE_89569_length_180_cov_1.917241_g81628_i0forward_frame_2 - 0.05 13.6 0.0 0.053 13.6 0.0 1.1 1 0 0 1 1 1 0 Fic/DOC family N-terminal IL13 PF03487.13 NODE_89567_length_180_cov_1.924138_g81626_i0forward_frame_2 - 0.076 12.8 0.0 0.081 12.7 0.0 1.1 1 0 0 1 1 1 0 Interleukin-13 DUF4236 PF14020.6 NODE_89566_length_180_cov_1.924138_g81625_i0forward_frame_3 - 0.09 13.4 0.4 0.09 13.4 0.4 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4236) CENP-B_N PF04218.13 NODE_89561_length_180_cov_1.951724_g81620_i0forward_frame_3 - 0.15 11.7 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Stealth_CR3 PF17102.5 NODE_89560_length_180_cov_1.958621_g81619_i0reverse_frame_3 - 0.048 13.6 0.1 0.062 13.2 0.1 1.2 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 DNA_pol_A_exo1 PF01612.20 NODE_89559_length_180_cov_1.979310_g81618_i0forward_frame_2 - 2.5e-08 33.8 0.1 2.5e-08 33.8 0.1 1.0 1 0 0 1 1 1 1 3'-5' exonuclease NOD2_WH PF17779.1 NODE_89559_length_180_cov_1.979310_g81618_i0forward_frame_2 - 0.013 15.8 0.0 0.016 15.5 0.0 1.1 1 0 0 1 1 1 0 NOD2 winged helix domain NiFeSe_Hases PF00374.19 NODE_89554_length_180_cov_2.006897_g81613_i0reverse_frame_2 - 0.076 11.9 0.0 0.086 11.7 0.0 1.0 1 0 0 1 1 1 0 Nickel-dependent hydrogenase RunxI PF08504.11 NODE_89554_length_180_cov_2.006897_g81613_i0forward_frame_3 - 0.058 14.1 0.0 0.067 13.9 0.0 1.0 1 0 0 1 1 1 0 Runx inhibition domain DUF2681 PF10883.8 NODE_89553_length_180_cov_2.013793_g81612_i0forward_frame_2 - 0.25 11.7 0.1 0.31 11.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) TMCO5 PF14992.6 NODE_89552_length_180_cov_2.020690_g81611_i0reverse_frame_3 - 0.32 10.5 0.2 0.3 10.6 0.2 1.0 1 0 0 1 1 1 0 TMCO5 family Mucin15 PF15672.5 NODE_89552_length_180_cov_2.020690_g81611_i0forward_frame_2 - 0.014 14.9 0.9 0.015 14.9 0.9 1.0 1 0 0 1 1 1 0 Cell-membrane associated Mucin15 DUF2407_C PF13373.6 NODE_89552_length_180_cov_2.020690_g81611_i0forward_frame_2 - 0.014 15.5 0.0 0.015 15.4 0.0 1.0 1 0 0 1 1 1 0 DUF2407 C-terminal domain PH_17 PF18012.1 NODE_89550_length_180_cov_2.020690_g81609_i0forward_frame_2 - 0.017 14.8 0.6 1.1 9.0 0.0 2.1 1 1 1 2 2 2 0 PH domain Fungal_trans_2 PF11951.8 NODE_89548_length_180_cov_2.041379_g81607_i0reverse_frame_3 - 0.027 13.3 0.1 0.03 13.1 0.1 1.0 1 0 0 1 1 1 0 Fungal specific transcription factor domain RabGAP-TBC PF00566.18 NODE_89548_length_180_cov_2.041379_g81607_i0reverse_frame_2 - 0.019 14.6 0.2 0.02 14.5 0.2 1.0 1 0 0 1 1 1 0 Rab-GTPase-TBC domain Glypican PF01153.19 NODE_89548_length_180_cov_2.041379_g81607_i0reverse_frame_2 - 0.1 11.4 0.1 0.1 11.4 0.1 1.0 1 0 0 1 1 1 0 Glypican Pex26 PF07163.12 NODE_89547_length_180_cov_2.041379_g81606_i0reverse_frame_2 - 0.05 12.9 1.8 0.06 12.7 1.8 1.0 1 0 0 1 1 1 0 Pex26 protein SAS-6_N PF16531.5 NODE_89542_length_180_cov_2.068966_g81601_i0reverse_frame_2 - 0.02 15.4 0.1 0.025 15.2 0.1 1.2 1 0 0 1 1 1 0 Centriolar protein SAS N-terminal CopD PF05425.13 NODE_89540_length_180_cov_2.075862_g81599_i0forward_frame_2 - 5.7e-09 36.3 0.9 6.6e-09 36.1 0.9 1.1 1 0 0 1 1 1 1 Copper resistance protein D cNMP_binding PF00027.29 NODE_89539_length_180_cov_2.075862_g81598_i0forward_frame_2 - 6.9e-10 38.9 0.0 7.8e-10 38.7 0.0 1.0 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain HEAT PF02985.22 NODE_89536_length_180_cov_2.103448_g81595_i0reverse_frame_2 - 0.023 14.9 0.0 0.042 14.1 0.0 1.5 2 0 0 2 2 2 0 HEAT repeat HARE-HTH PF05066.13 NODE_89536_length_180_cov_2.103448_g81595_i0reverse_frame_2 - 0.029 14.7 0.0 0.036 14.4 0.0 1.1 1 0 0 1 1 1 0 HB1, ASXL, restriction endonuclease HTH domain YgbB PF02542.16 NODE_89536_length_180_cov_2.103448_g81595_i0reverse_frame_2 - 0.12 12.7 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 YgbB family DAO_C PF16901.5 NODE_89535_length_180_cov_2.103448_g81594_i0forward_frame_3 - 0.18 11.7 1.1 2.2 8.2 0.3 2.0 1 1 1 2 2 2 0 C-terminal domain of alpha-glycerophosphate oxidase DUF2461 PF09365.10 NODE_89534_length_180_cov_2.103448_g81593_i0reverse_frame_3 - 0.17 11.8 0.0 0.18 11.8 0.0 1.0 1 0 0 1 1 1 0 Conserved hypothetical protein (DUF2461) Ank_3 PF13606.6 NODE_89530_length_180_cov_2.131034_g81589_i0forward_frame_3 - 0.039 14.5 0.0 0.059 13.9 0.0 1.3 1 0 0 1 1 1 0 Ankyrin repeat PRP38_assoc PF12871.7 NODE_89527_length_180_cov_2.144828_g81586_i0forward_frame_3 - 0.13 12.9 21.7 0.22 12.2 21.7 1.4 1 0 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term RSB_motif PF16294.5 NODE_89527_length_180_cov_2.144828_g81586_i0forward_frame_3 - 8.1 6.8 17.9 10 6.5 17.9 1.1 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif Atrophin-1 PF03154.15 NODE_89527_length_180_cov_2.144828_g81586_i0forward_frame_2 - 1.1 7.4 22.2 1.2 7.3 22.2 1.1 1 0 0 1 1 1 0 Atrophin-1 family STAG PF08514.11 NODE_89527_length_180_cov_2.144828_g81586_i0forward_frame_2 - 5 7.1 9.0 12 5.9 9.0 1.7 1 1 0 1 1 1 0 STAG domain DUF523 PF04463.12 NODE_89526_length_180_cov_2.151724_g81585_i0forward_frame_2 - 0.036 14.1 0.1 0.036 14.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF523) FAD_binding_2 PF00890.24 NODE_89525_length_180_cov_2.165517_g81584_i0reverse_frame_2 - 0.00095 18.3 0.0 0.00096 18.3 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 NODE_89525_length_180_cov_2.165517_g81584_i0reverse_frame_2 - 0.019 14.2 0.0 0.019 14.2 0.0 1.0 1 0 0 1 1 1 0 Thi4 family GP46 PF07409.12 NODE_89522_length_180_cov_2.179310_g81581_i0reverse_frame_2 - 0.14 11.9 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Phage protein GP46 Mannitol_dh PF01232.23 NODE_89522_length_180_cov_2.179310_g81581_i0forward_frame_2 - 1.1e-13 51.6 0.0 1.2e-13 51.5 0.0 1.0 1 0 0 1 1 1 1 Mannitol dehydrogenase Rossmann domain GalKase_gal_bdg PF10509.9 NODE_89522_length_180_cov_2.179310_g81581_i0forward_frame_2 - 0.15 11.7 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Galactokinase galactose-binding signature Pho88 PF10032.9 NODE_89516_length_180_cov_2.200000_g81575_i0reverse_frame_3 - 0.13 11.5 0.0 0.14 11.4 0.0 1.0 1 0 0 1 1 1 0 Phosphate transport (Pho88) DUF4403 PF14356.6 NODE_89515_length_180_cov_2.206897_g81574_i0reverse_frame_3 - 0.16 10.6 0.0 0.16 10.6 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4403) zf-HC5HC2H PF13771.6 NODE_89514_length_180_cov_2.206897_g81573_i0reverse_frame_3 - 6e-05 23.2 2.4 7.5e-05 22.9 2.4 1.1 1 0 0 1 1 1 1 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 NODE_89514_length_180_cov_2.206897_g81573_i0reverse_frame_3 - 0.00032 20.9 1.9 0.0004 20.5 1.9 1.1 1 0 0 1 1 1 1 PHD-zinc-finger like domain PEX-1N PF09262.11 NODE_89513_length_180_cov_2.206897_g81572_i0forward_frame_2 - 0.13 12.7 0.0 0.15 12.5 0.0 1.1 1 0 0 1 1 1 0 Peroxisome biogenesis factor 1, N-terminal Dicty_CAD PF05720.12 NODE_89512_length_180_cov_2.213793_g81571_i0reverse_frame_3 - 0.1 12.6 0.1 0.13 12.2 0.1 1.3 1 1 0 1 1 1 0 Cell-cell adhesion domain DUF2002 PF09400.10 NODE_89512_length_180_cov_2.213793_g81571_i0forward_frame_2 - 1.5e-31 108.7 0.3 1.6e-31 108.6 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2002) MotA_ExbB PF01618.16 NODE_89507_length_180_cov_2.262069_g81566_i0forward_frame_3 - 0.013 15.2 0.0 0.013 15.2 0.0 1.1 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family DUF413 PF04219.12 NODE_89507_length_180_cov_2.262069_g81566_i0forward_frame_2 - 0.061 13.4 0.1 0.061 13.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF DUF4658 PF15555.6 NODE_89505_length_180_cov_2.303448_g81564_i0forward_frame_3 - 0.033 14.3 0.5 0.038 14.1 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4658) zf-Sec23_Sec24 PF04810.15 NODE_89503_length_180_cov_2.317241_g81562_i0forward_frame_3 - 0.17 12.0 2.4 1.4 9.0 0.0 2.5 2 1 0 2 2 2 0 Sec23/Sec24 zinc finger Diphtheria_R PF01324.19 NODE_89502_length_180_cov_2.324138_g81561_i0forward_frame_2 - 0.018 14.7 0.0 0.019 14.6 0.0 1.0 1 0 0 1 1 1 0 Diphtheria toxin, R domain Ephrin_rec_like PF07699.13 NODE_89500_length_180_cov_2.351724_g81559_i0forward_frame_3 - 0.071 12.9 1.0 0.54 10.1 0.3 2.0 1 1 1 2 2 2 0 Putative ephrin-receptor like SPC22 PF04573.12 NODE_89499_length_180_cov_2.365517_g81558_i0forward_frame_2 - 0.035 13.6 0.6 0.039 13.4 0.6 1.0 1 0 0 1 1 1 0 Signal peptidase subunit DUF1251 PF06856.11 NODE_89499_length_180_cov_2.365517_g81558_i0forward_frame_2 - 0.037 13.7 0.2 0.037 13.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1251) MalF_P2 PF14785.6 NODE_89499_length_180_cov_2.365517_g81558_i0forward_frame_2 - 0.053 13.5 0.1 0.054 13.5 0.1 1.0 1 0 0 1 1 1 0 Maltose transport system permease protein MalF P2 domain Phage_holin_2_1 PF04971.12 NODE_89497_length_180_cov_2.393103_g81556_i0reverse_frame_2 - 0.0057 16.6 0.0 0.007 16.3 0.0 1.1 1 0 0 1 1 1 1 Bacteriophage P21 holin S Glyco_hydro_72 PF03198.14 NODE_89495_length_180_cov_2.413793_g81554_i0reverse_frame_2 - 5.7e-09 35.7 0.1 5.9e-09 35.6 0.1 1.0 1 0 0 1 1 1 1 Glucanosyltransferase zinc_ribbon_11 PF11682.8 NODE_89491_length_180_cov_2.448276_g81550_i0reverse_frame_2 - 0.057 13.4 0.0 0.06 13.4 0.0 1.1 1 0 0 1 1 1 0 Probable zinc-ribbon NTP_transferase PF00483.23 NODE_89490_length_180_cov_2.462069_g81549_i0forward_frame_3 - 1.6e-10 41.0 0.0 1.7e-10 40.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase GerA PF03323.13 NODE_89489_length_180_cov_2.468966_g81548_i0reverse_frame_2 - 0.19 10.2 2.7 0.18 10.2 2.7 1.0 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein AA_permease_2 PF13520.6 NODE_89488_length_180_cov_2.510345_g81547_i0forward_frame_3 - 3.1e-10 39.5 0.4 3.2e-10 39.4 0.4 1.0 1 0 0 1 1 1 1 Amino acid permease zf_Hakai PF18408.1 NODE_89487_length_180_cov_2.517241_g81546_i0forward_frame_2 - 0.27 11.0 2.9 2.4 7.9 0.1 2.2 2 0 0 2 2 2 0 C2H2 Hakai zinc finger domain DNA_RNApol_7kD PF03604.13 NODE_89486_length_180_cov_2.524138_g81545_i0reverse_frame_3 - 0.013 15.2 0.2 0.018 14.7 0.2 1.2 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit ABC_tran PF00005.27 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 1.6e-06 28.7 0.3 2.2e-06 28.2 0.2 1.3 1 1 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 4.2e-06 26.8 0.3 2.4e-05 24.3 0.3 1.9 1 1 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.001 18.8 0.3 0.0026 17.5 0.3 1.7 1 1 1 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0011 19.3 0.0 0.0012 19.2 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0023 18.5 2.5 0.0031 18.0 2.0 1.6 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0024 18.0 0.3 0.0036 17.4 0.1 1.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase T2SSE PF00437.20 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0027 16.8 0.1 0.0027 16.8 0.1 1.0 1 0 0 1 1 1 1 Type II/IV secretion system protein Septin PF00735.18 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0038 16.5 0.0 0.0054 16.0 0.0 1.2 1 0 0 1 1 1 1 Septin IstB_IS21 PF01695.17 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0053 16.5 0.0 0.0054 16.5 0.0 1.1 1 0 0 1 1 1 1 IstB-like ATP binding protein cobW PF02492.19 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.0056 16.3 0.2 0.0081 15.8 0.1 1.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.011 16.1 0.2 0.021 15.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.023 14.2 0.0 0.023 14.2 0.0 1.0 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_25 PF13481.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.024 14.2 0.0 0.024 14.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.027 14.2 0.0 0.063 13.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.027 13.8 0.0 0.027 13.8 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family DLIC PF05783.11 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.028 13.3 0.0 0.028 13.3 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_28 PF13521.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.032 14.5 0.2 0.044 14.0 0.2 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.036 14.0 0.1 0.047 13.6 0.1 1.2 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.037 14.2 0.1 0.064 13.4 0.1 1.3 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.045 13.7 0.0 0.045 13.7 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain MobB PF03205.14 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.046 13.6 0.1 0.068 13.1 0.1 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B PduV-EutP PF10662.9 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.049 13.4 0.0 0.073 12.8 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_30 PF13604.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.052 13.3 0.2 0.065 12.9 0.2 1.3 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.064 13.3 0.1 0.067 13.2 0.1 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.079 12.2 0.0 0.079 12.2 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.09 13.1 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 NODE_89483_length_180_cov_2.586207_g81542_i0reverse_frame_2 - 0.14 12.2 0.1 0.23 11.5 0.0 1.4 2 0 0 2 2 2 0 AAA domain VAPB_antitox PF02697.14 NODE_89482_length_180_cov_2.606897_g81541_i0reverse_frame_3 - 0.059 14.2 0.1 4.9 8.0 0.0 2.0 2 0 0 2 2 2 0 Putative antitoxin SCA7 PF08313.12 NODE_89481_length_180_cov_2.606897_g81540_i0forward_frame_3 - 0.0034 17.2 0.7 0.0052 16.7 0.7 1.3 1 0 0 1 1 1 1 SCA7, zinc-binding domain DUF5325 PF17259.2 NODE_89478_length_180_cov_2.648276_g81537_i0reverse_frame_3 - 0.036 13.9 0.1 0.05 13.5 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5325) Flavi_NS4A PF01350.17 NODE_89477_length_180_cov_2.662069_g81536_i0reverse_frame_3 - 0.028 14.4 0.0 0.028 14.4 0.0 1.0 1 0 0 1 1 1 0 Flavivirus non-structural protein NS4A Tat PF00539.18 NODE_89476_length_180_cov_2.675862_g81535_i0forward_frame_2 - 3.7 7.8 8.8 1.8 8.8 0.1 2.9 1 1 2 3 3 3 0 Transactivating regulatory protein (Tat) GPS PF01825.21 NODE_89472_length_180_cov_2.737931_g81531_i0reverse_frame_3 - 0.11 13.0 1.1 0.18 12.3 1.1 1.3 1 0 0 1 1 1 0 GPCR proteolysis site, GPS, motif ODV-E18 PF10717.9 NODE_89466_length_180_cov_2.882759_g81525_i0forward_frame_3 - 0.062 13.2 0.1 0.072 13.0 0.1 1.1 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 CitMHS_2 PF16980.5 NODE_89466_length_180_cov_2.882759_g81525_i0forward_frame_2 - 0.14 10.8 0.4 0.16 10.6 0.4 1.0 1 0 0 1 1 1 0 Putative citrate transport SEO_C PF14577.6 NODE_89464_length_180_cov_2.958621_g81523_i0forward_frame_3 - 0.053 13.0 1.0 0.06 12.8 1.0 1.0 1 0 0 1 1 1 0 Sieve element occlusion C-terminus Pepsin-I3 PF06394.13 NODE_89464_length_180_cov_2.958621_g81523_i0forward_frame_3 - 0.06 13.6 0.4 0.079 13.2 0.4 1.2 1 0 0 1 1 1 0 Pepsin inhibitor-3-like repeated domain BPL_LplA_LipB PF03099.19 NODE_89460_length_180_cov_3.179310_g81519_i0reverse_frame_2 - 0.088 12.7 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Biotin/lipoate A/B protein ligase family Sec2p PF06428.11 NODE_89459_length_180_cov_3.262069_g81518_i0reverse_frame_3 - 0.0079 16.1 1.6 0.0091 15.9 1.6 1.0 1 0 0 1 1 1 1 GDP/GTP exchange factor Sec2p CYSTM PF12734.7 NODE_89457_length_180_cov_3.282759_g81516_i0reverse_frame_3 - 0.0018 18.5 3.8 0.0022 18.2 3.8 1.3 1 0 0 1 1 1 1 Cysteine-rich TM module stress tolerance NAPRTase PF04095.16 NODE_89453_length_180_cov_3.503448_g81512_i0reverse_frame_2 - 2.2e-19 70.0 0.0 2.3e-19 70.0 0.0 1.0 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family RhoGEF67_u1 PF16615.5 NODE_89451_length_180_cov_3.558621_g81510_i0forward_frame_2 - 0.47 11.0 3.6 0.17 12.4 1.3 1.4 2 0 0 2 2 2 0 Unstructured region one on RhoGEF 6 and 7 PPR_3 PF13812.6 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 3.9e-06 26.8 0.0 5.4e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 2.4e-05 24.4 0.0 2.6e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 PPR repeat family PPR PF01535.20 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 8.7e-05 22.5 0.0 0.00015 21.8 0.0 1.4 2 0 0 2 2 2 1 PPR repeat PPR_1 PF12854.7 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 0.00064 19.4 0.0 0.044 13.5 0.0 2.1 2 0 0 2 2 2 1 PPR repeat TPR_4 PF07721.14 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 0.0051 17.3 0.5 0.0051 17.3 0.5 1.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 0.0056 17.4 0.1 0.0066 17.2 0.1 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat PPR_long PF17177.4 NODE_89444_length_180_cov_4.655172_g81503_i0reverse_frame_3 - 0.011 15.1 0.0 0.014 14.8 0.0 1.1 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Hydrophob_seed PF14547.6 NODE_89443_length_180_cov_10.365517_g81502_i0forward_frame_3 - 0.016 15.4 2.3 0.018 15.2 2.3 1.3 1 1 0 1 1 1 0 Hydrophobic seed protein Stomagen PF16851.5 NODE_89441_length_180_cov_11.427586_g81500_i0forward_frame_2 - 0.039 14.0 0.2 0.06 13.4 0.2 1.3 1 0 0 1 1 1 0 Stomagen DmpG_comm PF07836.11 NODE_89428_length_180_cov_24.117241_g81487_i0reverse_frame_2 - 0.0068 15.9 0.0 0.0091 15.5 0.0 1.1 1 0 0 1 1 1 1 DmpG-like communication domain RsmJ PF04378.13 NODE_89427_length_180_cov_24.213793_g81486_i0forward_frame_2 - 0.063 12.5 0.0 0.064 12.5 0.0 1.0 1 0 0 1 1 1 0 Ribosomal RNA large subunit methyltransferase D, RlmJ DUF5484 PF17583.2 NODE_89426_length_180_cov_25.255172_g81485_i0reverse_frame_2 - 0.042 13.5 0.0 0.053 13.2 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5484) Anophelin PF10731.9 NODE_89426_length_180_cov_25.255172_g81485_i0reverse_frame_2 - 0.16 11.9 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Thrombin inhibitor from mosquito DUF5365 PF17326.2 NODE_89425_length_180_cov_26.062069_g81484_i0reverse_frame_2 - 0.025 15.0 0.1 0.029 14.8 0.1 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5365) DUF5436 PF17504.2 NODE_89424_length_180_cov_26.103448_g81483_i0reverse_frame_3 - 0.01 16.1 1.3 0.012 15.9 1.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5436) ThiI PF02568.14 NODE_89424_length_180_cov_26.103448_g81483_i0forward_frame_3 - 0.13 11.9 0.0 0.14 11.7 0.0 1.0 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) COA2 PF17051.5 NODE_89422_length_180_cov_26.765517_g81481_i0forward_frame_3 - 0.061 13.4 0.1 0.077 13.1 0.1 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase assembly factor 2 MFS_1_like PF12832.7 NODE_89421_length_180_cov_27.282759_g81480_i0forward_frame_3 - 0.11 11.3 0.2 0.11 11.3 0.2 1.1 1 0 0 1 1 1 0 MFS_1 like family DCB PF16213.5 NODE_89420_length_180_cov_27.993103_g81479_i0reverse_frame_3 - 0.0021 17.8 1.7 0.0022 17.7 1.7 1.0 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 TORC_N PF12884.7 NODE_89420_length_180_cov_27.993103_g81479_i0reverse_frame_3 - 0.025 15.3 0.8 0.029 15.1 0.8 1.1 1 0 0 1 1 1 0 Transducer of regulated CREB activity, N terminus Arc_PepC_II PF06847.11 NODE_89420_length_180_cov_27.993103_g81479_i0reverse_frame_3 - 0.19 12.3 0.9 0.19 12.2 0.9 1.0 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminus Type II FAM165 PF14981.6 NODE_89419_length_180_cov_28.455172_g81478_i0reverse_frame_2 - 0.013 15.3 2.0 0.018 14.8 2.0 1.2 1 0 0 1 1 1 0 FAM165 family DUF4448 PF14610.6 NODE_89419_length_180_cov_28.455172_g81478_i0forward_frame_3 - 0.019 14.8 0.1 0.021 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) DNA_binding_1 PF01035.20 NODE_89418_length_180_cov_28.903448_g81477_i0reverse_frame_3 - 0.13 12.4 0.0 0.13 12.4 0.0 1.1 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, DNA binding domain MNHE PF01899.16 NODE_89418_length_180_cov_28.903448_g81477_i0forward_frame_3 - 0.78 9.5 6.2 0.81 9.4 6.2 1.0 1 0 0 1 1 1 0 Na+/H+ ion antiporter subunit IBB PF01749.20 NODE_89415_length_180_cov_30.179310_g81474_i0reverse_frame_3 - 0.2 12.1 7.7 0.24 11.9 7.7 1.1 1 0 0 1 1 1 0 Importin beta binding domain SR-25 PF10500.9 NODE_89414_length_180_cov_30.337931_g81473_i0reverse_frame_2 - 2 7.9 9.1 2.1 7.9 9.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein TT_ORF1 PF02956.14 NODE_89414_length_180_cov_30.337931_g81473_i0forward_frame_2 - 0.42 9.2 7.1 0.45 9.1 7.1 1.0 1 0 0 1 1 1 0 TT viral orf 1 Arm-DNA-bind_2 PF12167.8 NODE_89413_length_180_cov_30.765517_g81472_i0reverse_frame_3 - 0.19 11.7 0.1 0.3 11.0 0.1 1.3 1 0 0 1 1 1 0 Arm DNA-binding domain SRP40_C PF05022.12 NODE_89411_length_180_cov_31.627586_g81470_i0reverse_frame_3 - 0.16 12.8 6.6 0.18 12.6 6.6 1.3 1 1 0 1 1 1 0 SRP40, C-terminal domain BCMA-Tall_bind PF09257.10 NODE_89409_length_180_cov_32.337931_g81468_i0reverse_frame_3 - 0.018 15.1 8.2 0.018 15.1 8.2 1.7 1 1 1 2 2 2 0 BCMA, TALL-1 binding zf-rbx1 PF12678.7 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 1.1e-08 35.2 1.0 1.8e-08 34.5 1.0 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 3.8e-08 33.1 1.6 3.8e-08 33.1 1.6 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 4.2e-07 30.2 1.2 4.2e-07 30.2 1.2 1.4 2 0 0 2 2 1 1 Ring finger domain zf-RING_5 PF14634.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 5.3e-06 26.3 2.4 5.3e-06 26.3 2.4 1.7 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 5e-05 23.1 1.6 5e-05 23.1 1.6 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.00028 20.7 0.6 0.00028 20.7 0.6 1.5 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.00055 19.7 0.7 0.00055 19.7 0.7 1.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.00088 19.3 0.2 0.0012 18.8 0.2 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.0043 16.6 0.4 0.0057 16.2 0.4 1.2 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.011 15.4 0.6 0.011 15.4 0.6 2.3 3 0 0 3 3 3 0 RING-like zinc finger zf-RING_4 PF14570.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.012 15.4 0.8 0.012 15.4 0.8 1.5 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Zn-ribbon_8 PF09723.10 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.012 15.7 2.2 0.018 15.2 2.2 1.2 1 0 0 1 1 1 0 Zinc ribbon domain zf-RING-like PF08746.11 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.027 14.8 1.1 0.027 14.8 1.1 1.5 2 0 0 2 2 2 0 RING-like domain zf-TFIIB PF13453.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.047 13.0 0.5 0.076 12.4 0.5 1.4 1 0 0 1 1 1 0 Transcription factor zinc-finger zf-C3HC4_4 PF15227.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.06 13.5 2.4 0.12 12.6 2.4 1.5 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.14 12.2 6.4 0.076 13.1 3.8 1.9 2 1 1 3 3 3 0 RING-type zinc-finger zf-C3H2C3 PF17122.5 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 0.36 10.9 5.1 0.77 9.8 5.1 1.6 1 1 0 1 1 1 0 Zinc-finger UPF0547 PF10571.9 NODE_89405_length_180_cov_33.675862_g81464_i0forward_frame_3 - 1.1 9.4 7.7 4.9 7.3 2.0 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 SLC3A2_N PF16028.5 NODE_89404_length_180_cov_33.834483_g81463_i0forward_frame_2 - 3.2 7.4 4.7 1.1 8.8 0.2 1.9 1 1 1 2 2 2 0 Solute carrier family 3 member 2 N-terminus Croc_4 PF17691.1 NODE_89403_length_180_cov_33.986207_g81462_i0forward_frame_2 - 0.055 13.5 1.0 0.057 13.5 1.0 1.0 1 0 0 1 1 1 0 Contingent replication of cDNA 4 Med19 PF10278.9 NODE_89402_length_180_cov_34.358621_g81461_i0reverse_frame_2 - 1.7 8.5 11.6 1.8 8.5 11.6 1.0 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 CDP-OH_P_transf PF01066.21 NODE_89402_length_180_cov_34.358621_g81461_i0forward_frame_2 - 1.1 10.1 3.9 1.4 9.7 3.9 1.1 1 0 0 1 1 1 0 CDP-alcohol phosphatidyltransferase FixP_N PF14715.6 NODE_89402_length_180_cov_34.358621_g81461_i0forward_frame_2 - 3.6 7.4 16.9 1 9.1 5.5 2.1 2 0 0 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Glyco_transf_8 PF01501.20 NODE_89401_length_180_cov_34.420690_g81460_i0reverse_frame_2 - 0.0027 17.3 0.1 0.0032 17.0 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 8 ETRAMP PF09716.10 NODE_89398_length_180_cov_35.117241_g81457_i0reverse_frame_2 - 0.7 10.0 4.6 0.84 9.7 4.6 1.1 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DUF2733 PF10813.8 NODE_89396_length_180_cov_36.055172_g81455_i0forward_frame_3 - 0.51 10.2 3.1 9.9 6.0 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2733) LAGLIDADG_1 PF00961.19 NODE_89395_length_180_cov_37.841379_g81454_i0reverse_frame_2 - 0.0051 17.8 0.0 0.0065 17.4 0.0 1.2 1 0 0 1 1 1 1 LAGLIDADG endonuclease ALS2CR11 PF15729.5 NODE_89393_length_180_cov_38.641379_g81452_i0forward_frame_3 - 0.029 13.5 0.1 0.029 13.5 0.1 1.1 1 0 0 1 1 1 0 Amyotrophic lateral sclerosis 2 candidate 11 DUF716 PF04819.12 NODE_89392_length_180_cov_38.806897_g81451_i0reverse_frame_3 - 0.13 11.9 3.7 0.13 11.9 3.7 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF716) CRM1_repeat PF18777.1 NODE_89389_length_180_cov_42.296552_g81448_i0forward_frame_3 - 0.19 11.3 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat DUF3341 PF11821.8 NODE_89385_length_180_cov_46.220690_g81444_i0forward_frame_2 - 0.071 12.8 1.4 0.077 12.6 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) HCV_NS1 PF01560.17 NODE_89381_length_180_cov_48.255172_g81440_i0reverse_frame_3 - 0.094 11.4 0.3 0.1 11.3 0.3 1.0 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein E2/NS1 YebO PF13974.6 NODE_89379_length_180_cov_49.082759_g81438_i0reverse_frame_3 - 0.061 13.4 0.6 0.061 13.4 0.6 1.6 1 1 1 2 2 2 0 YebO-like protein DUF4995 PF16386.5 NODE_89379_length_180_cov_49.082759_g81438_i0forward_frame_3 - 0.11 12.4 0.6 0.16 12.0 0.6 1.3 1 1 0 1 1 1 0 Domain of unknown function ETRAMP PF09716.10 NODE_89379_length_180_cov_49.082759_g81438_i0forward_frame_3 - 2.4 8.3 4.5 0.78 9.8 1.9 1.6 1 1 1 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Med30 PF11315.8 NODE_89376_length_180_cov_54.503448_g81435_i0reverse_frame_3 - 0.036 14.3 0.8 0.042 14.0 0.8 1.1 1 0 0 1 1 1 0 Mediator complex subunit 30 zf_UBZ PF18439.1 NODE_89374_length_180_cov_58.379310_g81433_i0forward_frame_2 - 0.052 13.2 0.1 0.079 12.6 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger TraX PF05857.11 NODE_89369_length_180_cov_59.772414_g81428_i0reverse_frame_3 - 0.026 14.6 0.0 0.028 14.5 0.0 1.0 1 0 0 1 1 1 0 TraX protein HNH PF01844.23 NODE_89369_length_180_cov_59.772414_g81428_i0forward_frame_2 - 0.058 13.6 0.0 0.079 13.1 0.0 1.2 1 0 0 1 1 1 0 HNH endonuclease NapE PF06796.11 NODE_89369_length_180_cov_59.772414_g81428_i0forward_frame_2 - 0.38 10.3 0.0 0.38 10.3 0.0 2.1 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE TBP PF00352.21 NODE_89368_length_180_cov_60.165517_g81427_i0forward_frame_3 - 0.11 12.5 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Transcription factor TFIID (or TATA-binding protein, TBP) STPPase_N PF16891.5 NODE_89366_length_180_cov_63.186207_g81425_i0reverse_frame_3 - 0.1 13.0 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain Phage_capsid PF05065.13 NODE_89366_length_180_cov_63.186207_g81425_i0forward_frame_2 - 0.13 11.6 0.0 0.13 11.6 0.0 1.0 1 0 0 1 1 1 0 Phage capsid family LodA_C PF18417.1 NODE_89364_length_180_cov_64.206897_g81423_i0reverse_frame_3 - 0.022 14.5 0.0 0.022 14.5 0.0 1.1 1 0 0 1 1 1 0 L-lysine epsilon oxidase C-terminal domain SoxG PF04268.12 NODE_89359_length_180_cov_70.000000_g81418_i0reverse_frame_2 - 0.033 14.3 0.0 0.033 14.3 0.0 1.2 1 0 0 1 1 1 0 Sarcosine oxidase, gamma subunit family DUF2525 PF10733.9 NODE_89357_length_180_cov_74.441379_g81416_i0forward_frame_3 - 0.11 12.8 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2525) DC_STAMP PF07782.13 NODE_89351_length_180_cov_90.351724_g81410_i0forward_frame_2 - 0.032 14.1 0.1 0.032 14.0 0.1 1.0 1 0 0 1 1 1 0 DC-STAMP-like protein zf-Dof PF02701.15 NODE_89342_length_180_cov_127.655172_g81401_i0reverse_frame_3 - 0.017 15.3 0.4 0.022 14.9 0.4 1.2 1 0 0 1 1 1 0 Dof domain, zinc finger PIG-Y PF15159.6 NODE_89340_length_180_cov_139.075862_g81399_i0forward_frame_3 - 0.048 14.6 0.9 0.061 14.3 0.9 1.1 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y Thyroglobulin_1 PF00086.18 NODE_89339_length_180_cov_145.331034_g81398_i0forward_frame_3 - 0.026 14.2 0.2 0.029 14.1 0.2 1.2 1 0 0 1 1 1 0 Thyroglobulin type-1 repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks463.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks463.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks463.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks463.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:51:26 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Glycolytic PF00274.19 ORF106563 - 5.2e-160 531.9 0.0 5.8e-160 531.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I PIN_8 PF18476.1 ORF102260 - 0.0055 16.6 0.9 0.0076 16.1 0.9 1.1 1 0 0 1 1 1 1 PIN like domain PTPS PF01242.19 ORF102260 - 0.018 15.0 0.1 0.066 13.2 0.1 1.9 1 1 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase OEP PF02321.18 ORF102260 - 0.12 12.2 4.9 0.19 11.5 4.9 1.2 1 0 0 1 1 1 0 Outer membrane efflux protein NIF PF03031.18 ORF101059 - 3.7e-49 166.5 0.4 6.7e-49 165.6 0.4 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Pkinase PF00069.25 ORF100074 - 6.7e-53 179.7 0.0 8.1e-53 179.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100074 - 2.4e-23 82.7 0.0 3.3e-23 82.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF100074 - 0.008 15.5 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF100074 - 0.15 11.0 0.2 0.2 10.6 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain HisKA PF00512.25 NODE_17294_length_1065_cov_4.025243_g13176_i0forward_frame_1 - 3.4e-10 39.8 0.1 6.9e-10 38.8 0.1 1.6 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 NODE_17294_length_1065_cov_4.025243_g13176_i0forward_frame_1 - 2e-08 34.5 0.0 5e-07 30.0 0.0 2.6 2 0 0 2 2 2 1 HAMP domain Abhydrolase_6 PF12697.7 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 1.8e-20 74.5 1.1 3e-20 73.8 1.1 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 2e-20 73.1 0.0 3.9e-20 72.1 0.0 1.5 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 9.6e-18 64.7 0.0 1.5e-17 64.1 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Esterase PF00756.20 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.00011 21.9 0.1 0.00069 19.3 0.1 2.0 1 1 0 1 1 1 1 Putative esterase Thioesterase PF00975.20 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.00015 21.9 0.0 0.00025 21.2 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain DUF5010 PF16402.5 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.0047 15.8 0.0 0.0074 15.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5010) Abhydrolase_2 PF02230.16 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.0094 15.8 0.0 5.7 6.7 0.0 2.8 3 0 0 3 3 3 2 Phospholipase/Carboxylesterase DUF915 PF06028.11 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.014 14.7 0.0 0.025 13.9 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) Palm_thioest PF02089.15 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.015 15.1 0.0 0.022 14.6 0.0 1.2 1 0 0 1 1 1 0 Palmitoyl protein thioesterase PGAP1 PF07819.13 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.027 14.2 0.1 0.052 13.3 0.1 1.4 1 0 0 1 1 1 0 PGAP1-like protein DLH PF01738.18 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.029 13.9 0.0 0.19 11.2 0.0 2.2 2 0 0 2 2 2 0 Dienelactone hydrolase family Lipase_3 PF01764.25 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.056 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) DUF676 PF05057.14 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.061 12.8 0.0 0.093 12.2 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) DUF1057 PF06342.12 NODE_17259_length_1066_cov_147.458778_g13147_i0forward_frame_2 - 0.3 10.1 0.0 0.49 9.4 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) ATP-synt_8 PF00895.20 NODE_17206_length_1068_cov_89.878025_g13104_i0reverse_frame_3 - 7 7.2 9.4 5 7.7 3.3 3.2 2 0 0 2 2 2 0 ATP synthase protein 8 Kinesin PF00225.23 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 1e-54 185.7 3.0 1e-54 185.7 3.0 1.6 2 0 0 2 2 2 1 Kinesin motor domain MatP_C PF17414.2 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 2.4 8.4 7.1 22 5.3 0.8 3.1 2 0 0 2 2 2 0 MatP C-terminal ribbon-helix-helix domain CK1gamma_C PF12605.8 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 4.5 8.5 7.8 0.28 12.4 0.6 2.4 1 1 0 2 2 2 0 Casein kinase 1 gamma C terminal DUF5320 PF17253.2 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 5.4 8.2 5.6 2.2 9.4 2.6 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5320) G-gamma PF00631.22 NODE_17200_length_1068_cov_121.072604_g13099_i0reverse_frame_2 - 6.3 6.9 6.4 4.6 7.3 3.0 2.5 2 1 1 3 3 3 0 GGL domain ECH_2 PF16113.5 ORF99221 - 3.2e-65 220.8 0.1 3.9e-65 220.5 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 ORF99221 - 2.2e-14 53.4 0.3 2.8e-14 53.0 0.3 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase CNTF PF01110.17 ORF99221 - 0.049 13.0 0.2 0.076 12.4 0.2 1.3 1 0 0 1 1 1 0 Ciliary neurotrophic factor PIN_9 PF18477.1 ORF99221 - 0.12 12.7 0.2 0.24 11.7 0.2 1.5 1 0 0 1 1 1 0 PIN like domain zf-C2H2_2 PF12756.7 ORF93145 - 1 9.7 8.6 5.6 7.4 2.4 2.9 2 1 1 3 3 3 0 C2H2 type zinc-finger (2 copies) Fer4_13 PF13370.6 ORF93145 - 1.6 9.3 6.5 5.5 7.6 0.2 3.3 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I zf-met PF12874.7 ORF93145 - 1.9 9.0 8.3 0.51 10.8 0.4 3.3 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF93145 - 7.5 6.4 7.2 8.2 6.3 0.1 3.3 3 0 0 3 3 3 0 zinc-finger C2H2-type Sulfatase PF00884.23 ORF85127 - 0.057 12.8 0.0 0.083 12.3 0.0 1.2 1 0 0 1 1 1 0 Sulfatase DUF565 PF04483.12 ORF75248 - 0.078 13.5 0.1 0.31 11.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF565) TTC5_OB PF16669.5 ORF7405 - 3.6e-21 75.0 0.8 6.1e-21 74.3 0.8 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat protein 5 OB fold domain TPR_1 PF00515.28 ORF7405 - 1e-13 50.4 13.7 2.2e-05 24.1 0.2 5.8 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF7405 - 6.1e-12 44.7 15.3 3.2e-05 23.7 0.1 5.8 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF7405 - 5.9e-11 42.8 0.1 9.9e-05 22.9 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF7405 - 3.9e-09 36.0 10.2 0.039 14.2 0.1 5.8 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF7405 - 1.4e-08 34.9 2.1 0.0069 16.7 0.2 3.1 2 2 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF7405 - 5.5e-08 32.4 10.3 0.1 12.3 0.6 5.7 3 2 2 5 5 5 3 TPR repeat TPR_19 PF14559.6 ORF7405 - 5.2e-06 26.9 1.4 2.9e-05 24.5 0.4 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF7405 - 7.1e-05 22.9 6.3 0.26 11.8 0.2 4.3 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF7405 - 0.00048 19.9 1.0 0.18 11.7 0.1 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF7405 - 0.00096 19.3 0.0 0.11 12.7 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF7405 - 0.0012 18.8 0.4 0.075 13.1 0.0 3.3 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF7405 - 0.0045 17.7 0.7 2.6 9.1 0.0 4.1 3 2 2 5 5 4 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF7405 - 0.012 15.8 3.3 0.014 15.6 0.5 2.3 2 1 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 ORF7405 - 0.022 14.8 0.6 0.087 12.9 0.1 2.2 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat SHNi-TPR PF10516.9 ORF7405 - 0.024 14.1 1.4 3.1 7.3 0.3 3.1 3 0 0 3 3 3 0 SHNi-TPR TPR_6 PF13174.6 ORF7405 - 0.043 14.5 2.2 0.67 10.7 0.0 3.6 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_3 PF07720.12 ORF7405 - 0.072 13.1 0.6 0.21 11.6 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 ORF7405 - 0.84 9.7 6.1 31 4.7 0.4 4.1 3 2 0 3 3 3 0 MIT (microtubule interacting and transport) domain DnaJ PF00226.31 ORF72535 - 5e-27 93.8 2.2 5e-27 93.8 2.2 2.2 2 0 0 2 2 2 1 DnaJ domain TPR_1 PF00515.28 ORF72535 - 1.2e-23 81.8 14.0 1.9e-06 27.4 2.7 5.7 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF72535 - 8.4e-21 72.4 4.4 2.2e-05 24.2 0.1 5.3 5 0 0 5 5 4 4 Tetratricopeptide repeat TPR_8 PF13181.6 ORF72535 - 1.1e-19 68.9 6.1 4.2e-05 23.4 0.1 5.8 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_12 PF13424.6 ORF72535 - 3.2e-10 40.2 0.6 0.00061 20.0 0.1 4.0 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF72535 - 1.1e-09 38.3 0.8 1.7 9.4 0.0 5.7 5 1 1 6 6 6 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF72535 - 2.2e-08 33.6 8.3 0.00036 20.1 0.7 4.6 3 1 2 5 5 5 3 TPR repeat TPR_19 PF14559.6 ORF72535 - 3.2e-08 33.9 2.5 0.062 13.8 0.1 4.1 3 1 0 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF72535 - 1.2e-07 32.3 0.0 0.006 17.2 0.0 3.4 2 1 1 3 3 3 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 ORF72535 - 1.6e-07 30.7 0.4 0.00018 20.9 0.0 3.7 4 0 0 4 4 4 1 SHNi-TPR TPR_17 PF13431.6 ORF72535 - 1.1e-06 28.6 7.0 0.056 13.9 1.3 4.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF72535 - 1.7e-06 28.3 0.0 12 7.0 0.0 4.6 3 1 2 5 5 4 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF72535 - 7.9e-06 25.9 0.0 0.00058 20.0 0.0 3.1 3 1 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF72535 - 4.9e-05 23.5 12.8 0.0018 18.5 4.0 3.8 2 1 1 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 Cas_Cas02710 PF09670.10 ORF72535 - 0.0033 16.3 2.5 0.0057 15.5 2.5 1.3 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) YfiO PF13525.6 ORF72535 - 0.018 14.8 3.2 1.1 8.9 0.1 2.6 1 1 1 3 3 3 0 Outer membrane lipoprotein TPR_10 PF13374.6 ORF72535 - 0.093 12.6 1.1 16 5.6 0.1 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF5113 PF17140.4 ORF72535 - 0.096 12.5 2.9 0.79 9.5 3.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5113) DUF3856 PF12968.7 ORF72535 - 0.11 12.6 1.3 1.5 8.9 0.6 2.8 2 1 1 3 3 3 0 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.6 ORF72535 - 0.12 12.5 9.0 12 6.1 0.0 4.6 6 0 0 6 6 5 0 Fis1 C-terminal tetratricopeptide repeat Imm42 PF15593.6 ORF72535 - 0.57 10.6 0.1 0.57 10.6 0.1 2.9 3 1 0 3 3 3 0 Immunity protein 42 DUF2250 PF10007.9 ORF72535 - 1.2 9.3 10.6 0.085 13.0 5.2 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) SRP_TPR_like PF17004.5 ORF72535 - 1.8 8.6 11.3 0.14 12.2 1.6 3.1 1 1 2 3 3 3 0 Putative TPR-like repeat TauE PF01925.19 ORF69706 - 7.7e-14 51.9 5.5 1.2e-08 34.9 0.9 2.3 2 1 0 2 2 2 2 Sulfite exporter TauE/SafE DUF3493 PF11998.8 ORF69706 - 0.26 11.5 1.3 1.6 8.9 0.0 2.6 2 0 0 2 2 2 0 Low psii accumulation1 / Rep27 3Beta_HSD PF01073.19 ORF62593 - 4e-19 68.7 0.0 5.4e-19 68.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF62593 - 4.7e-19 68.8 0.0 1.2e-18 67.5 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF62593 - 2.7e-13 50.2 0.0 4e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF62593 - 3.4e-12 46.4 0.0 5.2e-12 45.8 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF62593 - 3.2e-10 39.6 0.0 1.7e-09 37.3 0.0 2.1 2 1 0 2 2 2 1 Male sterility protein NmrA PF05368.13 ORF62593 - 3.2e-06 26.9 0.1 1.4e-05 24.8 0.0 1.9 2 0 0 2 2 2 1 NmrA-like family Polysacc_synt_2 PF02719.15 ORF62593 - 6.1e-06 25.6 0.0 8.9e-06 25.0 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF62593 - 9e-05 22.5 0.0 0.00025 21.0 0.0 1.7 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF62593 - 0.003 17.8 0.0 0.0058 16.9 0.0 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 ORF62593 - 0.048 13.8 0.3 0.15 12.2 0.3 1.9 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Pkinase PF00069.25 ORF57752 - 3.6e-24 85.5 0.2 6.4e-24 84.7 0.2 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57752 - 3.5e-15 56.0 0.1 6.8e-15 55.1 0.1 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Bac_DNA_binding PF00216.21 ORF57752 - 0.33 11.2 4.1 9.4 6.5 0.1 2.6 2 1 0 2 2 2 0 Bacterial DNA-binding protein MitMem_reg PF13012.6 ORF53049 - 0.098 13.1 0.4 0.2 12.1 0.3 1.5 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function Phage_1_1 PF08200.11 ORF49202 - 0.28 11.6 2.2 0.74 10.3 2.2 1.7 1 0 0 1 1 1 0 Bacteriophage 1.1 Protein Vpu PF00558.19 ORF49202 - 2.8 7.8 6.9 14 5.6 1.0 3.4 3 0 0 3 3 3 0 Vpu protein AOX PF01786.17 ORF49202 - 5.2 6.6 7.0 7.5 6.1 0.4 2.4 2 0 0 2 2 2 0 Alternative oxidase WD40 PF00400.32 ORF36410 - 6.2e-15 55.3 4.0 0.00063 20.5 0.0 6.0 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF36410 - 5.6e-11 42.6 0.0 0.00075 19.7 0.0 3.9 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF36410 - 0.00047 19.6 1.4 2.8 7.2 0.0 4.0 4 0 0 4 4 4 2 WD40-like domain eIF2A PF08662.11 ORF36410 - 0.061 13.2 0.0 1 9.2 0.0 2.7 2 2 1 3 3 3 0 Eukaryotic translation initiation factor eIF2A Cytochrom_B559 PF00283.19 ORF36410 - 0.11 11.9 0.4 0.28 10.7 0.1 1.8 2 0 0 2 2 2 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Rhodanese PF00581.20 ORF35163 - 9.1e-25 87.3 0.0 3e-13 50.2 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain SBP_bac_3 PF00497.20 ORF3334 - 3.4e-12 46.3 0.0 1.1e-11 44.6 0.0 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 AATF-Che1 PF13339.6 ORF28793 - 3.5 8.3 11.5 0.14 12.9 1.4 2.6 2 1 0 2 2 2 0 Apoptosis antagonizing transcription factor WD40 PF00400.32 ORF28706 - 1.7e-10 41.3 5.7 0.0017 19.1 0.0 6.8 6 1 1 7 7 7 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF28706 - 3.1e-05 24.2 0.3 0.004 17.4 0.1 3.5 2 2 2 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF1179 PF06678.11 ORF21318 - 0.044 13.8 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1179) NIF PF03031.18 ORF149442 - 4.8e-42 143.4 0.9 7.4e-42 142.8 0.9 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Hydrolase PF00702.26 ORF149442 - 0.086 13.1 0.0 16 5.7 0.0 2.2 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase FA_desaturase PF00487.24 ORF143268 - 4.9e-23 82.3 11.5 6.5e-23 81.9 11.5 1.1 1 0 0 1 1 1 1 Fatty acid desaturase ThrE PF06738.12 ORF143268 - 0.22 10.9 0.9 0.72 9.2 0.0 2.1 3 0 0 3 3 3 0 Putative threonine/serine exporter TIR_3 PF18567.1 ORF13492 - 0.021 14.8 0.6 0.052 13.5 0.1 1.8 2 0 0 2 2 2 0 Toll/interleukin-1 receptor domain Glycolytic PF00274.19 ORF13300 - 2.1e-159 529.9 0.0 2.4e-159 529.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I PRK PF00485.18 ORF119333 - 2.5e-28 99.2 6.5 1.3e-27 96.9 6.5 1.9 1 1 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 ORF119333 - 9.8e-07 29.4 1.1 5.8e-06 26.9 1.1 2.1 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 ORF119333 - 0.0034 16.6 0.0 0.0059 15.8 0.0 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_28 PF13521.6 ORF119333 - 0.021 15.1 0.2 0.076 13.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 ORF119333 - 0.029 14.3 0.6 3.4 7.6 0.1 2.8 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 ORF119333 - 0.096 13.1 0.1 0.23 11.9 0.0 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) CoaE PF01121.20 ORF119333 - 0.82 9.3 2.4 2.4 7.8 1.1 2.1 2 0 0 2 2 2 0 Dephospho-CoA kinase tRNA-synt_2e PF02091.15 ORF115867 - 0.0086 15.4 2.0 14 4.8 0.0 4.1 1 1 3 5 5 5 3 Glycyl-tRNA synthetase alpha subunit Urocanase_N PF17391.2 ORF115867 - 0.019 14.7 0.8 1e+02 2.6 0.0 4.8 1 1 6 7 7 7 0 Urocanase N-terminal domain LupA PF18242.1 ORF115867 - 0.11 12.1 0.9 1.2e+02 2.3 0.0 4.3 4 1 0 5 5 5 0 Legionella ubiquitin-specific protease A domain PHD PF00628.29 ORF114980 - 0.0099 15.8 4.4 0.02 14.7 4.4 1.5 1 0 0 1 1 1 1 PHD-finger PHD_2 PF13831.6 ORF114980 - 0.02 14.4 2.2 0.048 13.2 2.2 1.6 1 0 0 1 1 1 0 PHD-finger DUF668 PF05003.12 ORF114980 - 0.44 11.0 3.8 13 6.3 0.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF668) DUF4407 PF14362.6 ORF114980 - 1 8.6 10.4 1.8 7.8 10.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) zf-B_box PF00643.24 ORF114980 - 1.7 8.9 12.3 0.12 12.6 7.4 1.6 2 0 0 2 2 2 0 B-box zinc finger TC1 PF15063.6 ORF10575 - 0.0035 17.2 0.4 0.25 11.3 0.0 2.6 2 0 0 2 2 2 2 Thyroid cancer protein 1 TPR_12 PF13424.6 ORF10575 - 0.011 16.0 1.9 0.033 14.5 0.2 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Abhydrolase_6 PF12697.7 ORF104114 - 2.1e-16 61.2 11.6 1.2e-15 58.7 11.6 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF104114 - 9.3e-16 58.2 0.1 2.7e-13 50.2 0.3 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF104114 - 0.00014 21.3 0.0 0.066 12.5 0.0 2.6 2 1 1 3 3 3 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF104114 - 0.013 15.0 0.0 0.29 10.6 0.0 2.3 2 0 0 2 2 2 0 Prolyl oligopeptidase family DLH PF01738.18 ORF104114 - 0.2 11.2 0.0 13 5.3 0.0 2.1 2 0 0 2 2 2 0 Dienelactone hydrolase family Plant_vir_prot PF01307.17 NODE_17292_length_1065_cov_79.362136_g13174_i0reverse_frame_3 - 0.2 11.9 1.8 0.41 10.9 0.1 2.4 2 0 0 2 2 2 0 Plant viral movement protein IclR PF01614.18 ORF95239 - 3.5e-21 75.4 0.6 7.6e-21 74.3 0.1 1.9 2 0 0 2 2 2 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 ORF95239 - 9.4e-08 31.7 1.6 5.7e-07 29.2 0.2 2.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 ORF95239 - 0.076 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 MarR family RQC PF09382.10 ORF95239 - 0.11 12.3 0.0 0.26 11.1 0.0 1.6 2 0 0 2 2 2 0 RQC domain ATP-synt_Eps PF04627.13 ORF78769 - 0.15 12.1 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial ATP synthase epsilon chain BPD_transp_1 PF00528.22 ORF78082 - 3.3e-26 92.1 16.2 3.3e-26 92.1 16.2 2.3 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component TPR_2 PF07719.17 ORF75552 - 3.9e-13 48.4 13.3 0.15 12.2 0.0 6.5 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_14 PF13428.6 ORF75552 - 2.1e-11 43.6 0.2 0.013 16.3 0.0 5.2 2 2 3 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF75552 - 3.4e-11 42.5 12.6 0.015 15.1 0.0 7.0 7 1 0 7 7 7 4 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF75552 - 4.5e-10 39.6 1.7 0.0016 18.7 0.0 3.3 3 0 0 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 ORF75552 - 9.5e-09 34.8 6.9 0.3 10.8 0.1 4.9 3 2 1 4 4 4 4 TPR repeat TPR_12 PF13424.6 ORF75552 - 4.1e-07 30.2 2.3 0.058 13.7 0.2 4.8 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF75552 - 4.3e-07 30.5 0.2 0.0002 21.9 0.0 3.5 3 2 2 5 5 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF75552 - 1e-06 29.1 0.4 0.11 13.0 0.0 4.0 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF75552 - 1.3e-06 28.4 3.3 0.098 13.1 0.0 5.1 6 0 0 6 6 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF75552 - 1.5e-05 24.9 14.5 0.3 11.4 0.0 6.2 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF75552 - 3.2e-05 23.6 8.1 0.19 11.8 0.0 5.0 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_15 PF13429.6 ORF75552 - 0.00046 19.5 0.5 0.044 13.0 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF4919 PF16266.5 ORF75552 - 0.016 15.2 0.2 0.034 14.1 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4919) DUF5638 PF18688.1 ORF75552 - 0.093 13.0 2.2 0.43 10.9 0.1 2.5 3 0 0 3 3 2 0 Family of unknown function (DUF5638) TPR_6 PF13174.6 ORF75552 - 0.098 13.3 2.6 9.3 7.1 0.0 4.1 3 1 0 3 3 3 0 Tetratricopeptide repeat CutA1 PF03091.15 ORF75552 - 0.1 12.5 0.5 0.66 9.9 0.1 2.3 2 0 0 2 2 2 0 CutA1 divalent ion tolerance protein TPR_9 PF13371.6 ORF75552 - 0.14 12.3 0.0 17 5.7 0.0 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF75552 - 0.72 9.8 4.7 15 5.6 0.1 4.4 6 0 0 6 6 6 0 Tetratricopeptide repeat UDPGT PF00201.18 ORF75079 - 2.1e-27 96.1 0.2 2.9e-27 95.6 0.2 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_1_4 PF13692.6 ORF75079 - 0.09 13.2 0.1 0.52 10.7 0.0 2.2 2 1 1 3 3 3 0 Glycosyl transferases group 1 KH_1 PF00013.29 ORF69593 - 6.5e-31 106.0 0.6 4.9e-11 42.3 0.2 3.2 3 0 0 3 3 3 3 KH domain KH_2 PF07650.17 ORF69593 - 5.1e-08 32.6 10.2 0.004 17.0 0.7 3.8 3 1 1 4 4 4 3 KH domain KH_5 PF13184.6 ORF69593 - 0.2 11.8 4.2 6.6 6.9 0.1 3.0 3 0 0 3 3 3 0 NusA-like KH domain KH_4 PF13083.6 ORF69593 - 0.22 11.4 4.5 1.1 9.2 0.2 3.0 3 0 0 3 3 3 0 KH domain Glug PF07581.12 ORF69593 - 0.27 11.7 2.2 16 6.1 0.1 2.6 2 0 0 2 2 2 0 The GLUG motif Methyltransf_23 PF13489.6 ORF5912 - 0.0058 16.5 0.0 0.011 15.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain cobW PF02492.19 ORF58028 - 9.6e-44 149.1 0.7 1.4e-43 148.5 0.7 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 ORF58028 - 1.8e-05 24.7 0.7 0.098 12.6 0.2 2.3 2 0 0 2 2 2 2 RsgA GTPase CobW_C PF07683.14 ORF58028 - 4.9e-05 23.2 0.0 0.0001 22.2 0.0 1.6 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain Viral_helicase1 PF01443.18 ORF58028 - 0.00011 22.1 0.1 0.00027 20.8 0.0 1.7 2 1 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 ORF58028 - 0.00098 19.4 0.0 0.0021 18.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain SRPRB PF09439.10 ORF58028 - 0.0063 16.0 0.1 0.013 14.9 0.1 1.5 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit PduV-EutP PF10662.9 ORF58028 - 0.021 14.6 0.8 2 8.1 0.1 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation TrwB_AAD_bind PF10412.9 ORF58028 - 0.025 13.5 0.1 0.039 12.9 0.1 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_14 PF13173.6 ORF58028 - 0.026 14.5 0.3 0.078 13.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 ORF58028 - 0.033 14.0 0.2 0.33 10.7 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_23 PF13476.6 ORF58028 - 0.033 14.7 2.2 4.1 7.9 0.2 2.2 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF58028 - 0.036 14.2 0.0 0.057 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF58028 - 0.038 14.0 0.6 0.075 13.0 0.1 1.7 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MobB PF03205.14 ORF58028 - 0.048 13.6 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 ORF58028 - 0.092 13.3 0.1 0.4 11.2 0.0 2.0 2 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF58028 - 0.094 12.0 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_29 PF13555.6 ORF58028 - 0.14 12.0 0.2 0.29 10.9 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain MeaB PF03308.16 ORF58028 - 0.27 10.2 0.6 1.2 8.0 0.0 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 ORF58028 - 0.42 10.2 2.0 1.6 8.3 0.4 2.5 2 1 1 3 3 3 0 SRP54-type protein, GTPase domain bZIP_1 PF00170.21 ORF57896 - 8.9e-08 32.1 3.4 8.9e-08 32.1 3.4 3.4 3 0 0 3 3 3 2 bZIP transcription factor bZIP_2 PF07716.15 ORF57896 - 0.00037 20.5 3.7 0.00037 20.5 3.7 3.3 4 0 0 4 4 4 1 Basic region leucine zipper JIP_LZII PF16471.5 ORF57896 - 0.049 13.8 0.1 0.049 13.8 0.1 2.9 3 0 0 3 3 3 0 JNK-interacting protein leucine zipper II CRIC_ras_sig PF10534.9 ORF57896 - 0.055 13.6 0.1 0.18 12.0 0.1 1.9 1 0 0 1 1 1 0 Connector enhancer of kinase suppressor of ras DUF2205 PF10224.9 ORF57896 - 0.31 11.1 0.1 0.31 11.1 0.1 2.5 3 0 0 3 3 3 0 Short coiled-coil protein CLZ PF16526.5 ORF57896 - 0.36 11.2 3.4 2.7 8.4 0.0 2.9 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Lebercilin PF15619.6 ORF57896 - 0.94 9.1 14.7 0.65 9.6 4.7 3.1 2 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease DUF724 PF05266.14 ORF57896 - 1.2 9.0 11.1 1.6 8.6 1.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF724) NPV_P10 PF05531.12 ORF57896 - 1.2 9.6 4.1 4.5 7.8 0.1 3.0 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein ZapB PF06005.12 ORF57896 - 1.4 9.4 9.0 3.1 8.3 0.0 3.3 3 0 0 3 3 3 0 Cell division protein ZapB DUF4140 PF13600.6 ORF57896 - 3.4 8.2 6.0 28 5.2 0.4 3.1 3 1 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) bZIP_Maf PF03131.17 ORF57896 - 4.4 7.9 10.4 0.85 10.2 3.0 3.0 2 2 1 3 3 3 0 bZIP Maf transcription factor DUF4337 PF14235.6 ORF57896 - 5.3 7.1 8.4 2 8.5 0.4 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4337) Cnn_1N PF07989.11 ORF57896 - 7.3 6.8 11.1 0.36 11.0 3.8 2.4 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 ABC_tran PF00005.27 ORF57731 - 5.1e-14 52.9 0.0 1e-13 52.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 ORF57731 - 0.0017 18.1 0.3 0.0048 16.6 0.3 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF57731 - 0.002 18.7 1.4 0.0028 18.2 0.4 1.7 1 1 1 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 ORF57731 - 0.0026 17.7 0.1 0.0048 16.8 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase SRP54 PF00448.22 ORF57731 - 0.023 14.3 0.0 0.04 13.5 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Ploopntkinase1 PF18748.1 ORF57731 - 0.046 13.2 0.0 0.093 12.2 0.0 1.5 1 1 0 1 1 1 0 P-loop Nucleotide Kinase1 AAA_21 PF13304.6 ORF57731 - 0.056 13.2 0.4 0.056 13.2 0.4 1.9 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 ORF57731 - 0.19 11.4 0.1 0.34 10.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 ORF57731 - 0.23 11.8 0.1 0.41 11.0 0.1 1.3 1 0 0 1 1 1 0 AAA ATPase domain CS PF04969.16 ORF55312 - 3.5e-18 66.4 1.2 6.3e-18 65.6 1.2 1.4 1 0 0 1 1 1 1 CS domain Nudc_N PF14050.6 ORF55312 - 5e-18 64.8 0.5 9.8e-18 63.9 0.5 1.5 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. Cupin_4 PF08007.12 ORF54271 - 1.5e-07 31.2 0.0 2.2e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Cupin superfamily protein EF-hand_6 PF13405.6 ORF54271 - 0.00013 21.6 1.7 0.36 10.9 0.0 2.9 2 1 1 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 ORF54271 - 0.00047 19.5 0.5 1.1 8.9 0.0 2.6 1 1 1 2 2 2 2 EF hand Cupin_8 PF13621.6 ORF54271 - 0.0023 17.7 0.0 0.19 11.4 0.0 2.4 2 1 0 2 2 2 1 Cupin-like domain EF-hand_8 PF13833.6 ORF54271 - 0.0023 17.7 0.1 0.63 9.9 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF54271 - 0.0029 17.0 1.3 2.7 7.7 0.3 2.7 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF54271 - 0.0081 16.6 0.3 0.53 10.8 0.3 2.4 1 1 0 1 1 1 1 EF-hand domain pair Dockerin_1 PF00404.18 ORF54271 - 0.069 13.4 1.0 7.3 6.9 1.0 2.3 1 1 1 2 2 2 0 Dockerin type I domain Ada_Zn_binding PF02805.16 ORF54205 - 2.1e-32 111.0 3.6 4.2e-32 110.0 3.6 1.5 1 0 0 1 1 1 1 Metal binding domain of Ada DNA_binding_1 PF01035.20 ORF54205 - 8.2e-32 109.2 3.2 1.3e-31 108.5 0.6 2.5 3 0 0 3 3 3 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 ORF54205 - 9.3e-22 77.6 0.0 1.6e-21 76.9 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HTH_AraC PF00165.23 ORF54205 - 4e-19 68.2 0.0 3.1e-11 43.1 0.0 2.6 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 ORF54205 - 1.2e-15 57.5 0.3 1.2e-15 57.5 0.3 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_15 PF12324.8 ORF54205 - 0.00034 20.5 0.5 9.7 6.2 0.0 3.4 2 1 1 3 3 3 3 Helix-turn-helix domain of alkylmercury lyase Patatin PF01734.22 ORF54155 - 3.1e-16 60.2 0.0 4e-15 56.5 0.0 2.1 1 1 0 1 1 1 1 Patatin-like phospholipase LRR_9 PF14580.6 ORF47888 - 5.1e-14 52.2 1.5 7.5e-14 51.6 1.5 1.2 1 0 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 ORF47888 - 2.7e-10 40.3 6.3 0.00027 21.3 0.9 3.3 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF47888 - 7.5e-07 28.8 5.7 1.5e-05 24.7 0.4 2.7 2 1 1 3 3 3 2 Leucine rich repeat LRR_6 PF13516.6 ORF47888 - 0.49 10.6 1.5 31 5.0 0.1 3.5 3 0 0 3 3 3 0 Leucine Rich repeat URO-D PF01208.17 ORF46593 - 9.8e-143 475.5 0.0 1.1e-142 475.3 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) XPC-binding PF09280.11 ORF46593 - 0.097 12.4 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 XPC-binding domain CCB1 PF12046.8 ORF43040 - 0.11 11.8 2.2 1.7 7.9 0.0 2.9 3 1 0 3 3 3 0 Cofactor assembly of complex C subunit B RapA_C PF12137.8 ORF42847 - 0.0061 15.6 10.6 0.013 14.5 10.6 1.5 1 0 0 1 1 1 1 RNA polymerase recycling family C-terminal DUF881 PF05949.12 ORF42847 - 0.013 15.4 2.9 0.028 14.3 2.5 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF881) DUF2232 PF09991.9 ORF42847 - 0.015 14.5 1.7 1.8 7.7 0.2 2.5 2 0 0 2 2 2 0 Predicted membrane protein (DUF2232) Phage_int_SAM_2 PF12834.7 ORF42847 - 0.017 15.8 5.0 0.084 13.6 2.0 3.0 2 1 1 3 3 3 0 Phage integrase, N-terminal COG5 PF10392.9 ORF42847 - 0.073 13.2 8.8 1.6 8.9 5.9 2.6 1 1 1 2 2 2 0 Golgi transport complex subunit 5 Sre PF03125.18 ORF42847 - 0.18 10.9 3.4 0.2 10.8 0.2 2.1 2 0 0 2 2 2 0 C. elegans Sre G protein-coupled chemoreceptor Antimicrobial12 PF08107.11 ORF42847 - 0.74 9.6 2.9 9.1 6.1 1.4 2.3 2 0 0 2 2 2 0 Pleurocidin family Exonuc_VII_L PF02601.15 ORF42847 - 1.2 8.7 11.2 0.67 9.5 9.1 1.6 2 0 0 2 2 2 0 Exonuclease VII, large subunit UPF0515 PF15135.6 ORF42847 - 3.2 7.0 7.3 6.2 6.1 7.3 1.4 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 YL1 PF05764.13 ORF30413 - 0.14 12.3 8.2 0.19 11.8 8.2 1.1 1 0 0 1 1 1 0 YL1 nuclear protein DNA_pol_phi PF04931.13 ORF30413 - 0.85 7.6 6.8 1.1 7.3 6.8 1.0 1 0 0 1 1 1 0 DNA polymerase phi CCDC106 PF15794.5 ORF30413 - 4 7.1 4.3 6.1 6.5 4.3 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 RRM_1 PF00076.22 ORF30134 - 3.4e-16 58.8 0.0 5.4e-16 58.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KH_1 PF00013.29 ORF30134 - 0.0044 16.8 0.1 0.0093 15.8 0.1 1.5 1 0 0 1 1 1 1 KH domain zf-CCCH PF00642.24 ORF30134 - 0.0058 16.5 1.3 0.0097 15.8 1.3 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Barttin PF15462.6 ORF28841 - 0.47 10.2 3.1 0.92 9.2 3.0 1.6 1 1 0 1 1 1 0 Bartter syndrome, infantile, with sensorineural deafness (Barttin) DUF2390 PF09523.10 ORF28841 - 3.9 7.8 8.3 0.33 11.3 0.6 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2390) UQ_con PF00179.26 ORF22046 - 7.2e-15 54.9 0.2 2.2e-14 53.3 0.2 1.9 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DUF272 PF03312.15 ORF22046 - 2.4 8.4 10.0 0.96 9.7 1.0 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF272) Citrate_synt PF00285.21 ORF19764 - 8.4e-103 344.2 0.4 9.5e-103 344.0 0.4 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF4607 PF15380.6 ORF19764 - 0.13 11.8 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4607) Rod_C PF10493.9 ORF19557 - 0.12 10.8 0.2 0.17 10.2 0.2 1.2 1 0 0 1 1 1 0 Rough deal protein C-terminal region LMF1 PF06762.14 ORF19024 - 0.0013 17.9 0.1 0.0018 17.4 0.1 1.1 1 0 0 1 1 1 1 Lipase maturation factor Glyco_transf_24 PF18404.1 ORF16580 - 3e-88 295.7 1.4 8.3e-86 287.7 1.4 2.0 1 1 0 1 1 1 1 Glucosyltransferase 24 Glyco_transf_8 PF01501.20 ORF16580 - 7.6e-09 35.5 0.0 1.3e-08 34.7 0.0 1.3 1 1 0 1 1 1 1 Glycosyl transferase family 8 FOLN PF09289.10 ORF16580 - 0.82 9.9 2.5 1.7 8.9 2.5 1.6 1 0 0 1 1 1 0 Follistatin/Osteonectin-like EGF domain Glyco_hydro_125 PF06824.11 ORF148527 - 2e-113 379.4 0.0 2.3e-113 379.2 0.0 1.0 1 0 0 1 1 1 1 Metal-independent alpha-mannosidase (GH125) DNA_ligase_IV PF11411.8 ORF148527 - 0.11 12.6 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 DNA ligase IV Aldo_ket_red PF00248.21 ORF145712 - 5e-56 190.1 0.0 5.8e-56 189.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Epimerase PF01370.21 ORF143811 - 1.1e-20 74.2 0.0 2.3e-20 73.1 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF143811 - 1.2e-19 70.4 0.0 1.8e-19 69.8 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF143811 - 2.7e-14 53.3 0.0 4e-14 52.7 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF143811 - 2.6e-12 46.5 0.0 4.1e-12 45.8 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF143811 - 2.8e-09 36.5 0.0 4.8e-09 35.8 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF143811 - 3.1e-08 33.7 0.0 5.6e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 ORF143811 - 3.9e-05 23.6 0.0 7.3e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 KR domain IP_trans PF02121.18 ORF143811 - 0.013 15.1 0.4 0.025 14.2 0.4 1.4 1 0 0 1 1 1 0 Phosphatidylinositol transfer protein LigB PF02900.18 ORF143811 - 0.02 14.0 0.0 0.028 13.5 0.0 1.2 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase NmrA PF05368.13 ORF143811 - 0.024 14.2 0.0 0.081 12.5 0.0 1.9 2 0 0 2 2 2 0 NmrA-like family adh_short PF00106.25 ORF143811 - 0.026 14.0 0.0 0.061 12.8 0.0 1.7 1 1 0 1 1 1 0 short chain dehydrogenase RmlD_sub_bind PF04321.17 ORF143811 - 0.036 13.2 0.0 0.054 12.6 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain NMT PF01233.19 ORF143811 - 0.056 13.3 0.1 0.15 11.9 0.1 1.7 1 0 0 1 1 1 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Sacchrp_dh_NADP PF03435.18 ORF143811 - 0.059 13.6 0.1 0.37 11.1 0.1 2.2 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain CD36 PF01130.21 ORF142307 - 3.4e-19 68.7 0.9 5e-19 68.2 0.9 1.2 1 0 0 1 1 1 1 CD36 family PorA PF11271.8 ORF142307 - 0.012 14.9 0.0 0.022 14.1 0.0 1.4 1 0 0 1 1 1 0 Porin PorA DMRL_synthase PF00885.19 ORF13729 - 6.5e-49 165.4 0.1 1.1e-48 164.6 0.1 1.4 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DHBP_synthase PF00926.19 ORF13729 - 1.6e-41 142.0 0.0 2.1e-41 141.6 0.0 1.2 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase Mucin15 PF15672.5 ORF119806 - 0.00045 19.8 6.3 0.00058 19.4 0.3 2.5 2 1 0 2 2 2 1 Cell-membrane associated Mucin15 DUF4834 PF16118.5 ORF119806 - 0.02 15.9 0.1 0.073 14.0 0.1 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Lustrin_cystein PF14625.6 ORF119806 - 3.4 8.1 9.2 0.88 10.0 5.1 2.2 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain WD40 PF00400.32 ORF109507 - 1.9e-19 69.6 4.1 1e-05 26.1 0.2 5.6 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF109507 - 6.6e-10 39.2 0.2 0.22 11.9 0.0 6.0 2 2 4 6 6 6 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF109507 - 0.0082 14.8 0.1 4.1 5.9 0.0 2.8 2 1 1 3 3 3 2 Nucleoporin Nup120/160 Kelch_5 PF13854.6 ORF109507 - 0.0084 16.1 0.6 15 5.7 0.0 3.3 3 0 0 3 3 3 2 Kelch motif TIMP PF00965.17 ORF109507 - 0.048 13.5 0.2 0.31 10.8 0.0 2.4 2 1 0 2 2 2 0 Tissue inhibitor of metalloproteinase RadC PF04002.15 ORF109089 - 4.5e-43 146.1 0.0 7e-43 145.5 0.0 1.3 1 0 0 1 1 1 1 RadC-like JAB domain HHH_2 PF12826.7 ORF109089 - 0.0038 17.3 0.0 0.12 12.5 0.0 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix motif Prok-JAB PF14464.6 ORF109089 - 0.016 15.0 0.0 0.024 14.4 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic homologs of the JAB domain Oxidored_molyb PF00174.19 ORF109068 - 1.9e-31 109.0 0.0 2.8e-31 108.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 ORF109068 - 6.3e-19 68.4 0.1 1.2e-18 67.4 0.1 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain EamA PF00892.20 ORF106247 - 8e-13 48.7 35.8 2e-06 28.0 13.5 3.0 2 1 0 2 2 2 2 EamA-like transporter family SLC35F PF06027.12 ORF106247 - 7.1e-10 38.9 20.4 1.2e-09 38.1 20.4 1.3 1 0 0 1 1 1 1 Solute carrier family 35 TPT PF03151.16 ORF106247 - 7.2e-07 28.8 16.9 1.9e-06 27.5 16.9 1.6 1 1 0 1 1 1 1 Triose-phosphate Transporter family CRT-like PF08627.10 ORF106247 - 0.00016 20.8 8.5 0.00016 20.8 8.5 2.8 1 1 1 3 3 3 1 CRT-like, chloroquine-resistance transporter-like TMEM234 PF10639.9 ORF106247 - 0.021 14.8 9.9 0.82 9.7 3.3 2.6 2 0 0 2 2 2 0 Putative transmembrane family 234 UAA PF08449.11 ORF106247 - 0.077 12.2 19.8 0.16 11.1 19.9 1.4 1 1 0 1 1 1 0 UAA transporter family Halogen_Hydrol PF10112.9 ORF106247 - 0.28 11.2 3.4 1.7 8.6 1.2 2.5 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PhnI PF05861.12 ORF105358 - 7.2e-152 505.3 0.0 8.3e-152 505.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial phosphonate metabolism protein (PhnI) PhnG PF06754.12 ORF105358 - 7.2e-05 22.8 0.0 0.00013 21.9 0.0 1.5 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnG RapA_C PF12137.8 ORF102100 - 0.0061 15.6 10.6 0.013 14.5 10.6 1.5 1 0 0 1 1 1 1 RNA polymerase recycling family C-terminal DUF881 PF05949.12 ORF102100 - 0.013 15.4 2.9 0.028 14.3 2.5 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF881) DUF2232 PF09991.9 ORF102100 - 0.015 14.5 1.7 1.8 7.7 0.2 2.5 2 0 0 2 2 2 0 Predicted membrane protein (DUF2232) Phage_int_SAM_2 PF12834.7 ORF102100 - 0.017 15.8 5.0 0.084 13.6 2.0 3.0 2 1 1 3 3 3 0 Phage integrase, N-terminal COG5 PF10392.9 ORF102100 - 0.073 13.2 8.8 1.6 8.9 5.9 2.6 1 1 1 2 2 2 0 Golgi transport complex subunit 5 Sre PF03125.18 ORF102100 - 0.18 10.9 3.4 0.2 10.8 0.2 2.1 2 0 0 2 2 2 0 C. elegans Sre G protein-coupled chemoreceptor Antimicrobial12 PF08107.11 ORF102100 - 0.74 9.6 2.9 9.1 6.1 1.4 2.3 2 0 0 2 2 2 0 Pleurocidin family Exonuc_VII_L PF02601.15 ORF102100 - 1.2 8.7 11.2 0.67 9.5 9.1 1.6 2 0 0 2 2 2 0 Exonuclease VII, large subunit UPF0515 PF15135.6 ORF102100 - 3.2 7.0 7.3 6.2 6.1 7.3 1.4 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 PMG PF05287.12 NODE_17491_length_1058_cov_238.711632_g1699_i3forward_frame_1 - 0.05 13.6 2.9 2 8.4 0.8 2.3 1 1 1 2 2 2 0 PMG protein Lsr2 PF11774.8 NODE_17424_length_1060_cov_5.681951_g13282_i0reverse_frame_2 - 0.36 11.0 2.4 1.5 9.0 0.1 2.7 3 0 0 3 3 3 0 Lsr2 Pkinase PF00069.25 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 3e-19 69.4 4.9 4.4e-19 68.9 4.9 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 9.8e-07 27.9 0.0 1.6e-06 27.2 0.0 1.4 1 1 0 1 1 1 1 Fungal protein kinase Pkinase_Tyr PF07714.17 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 4e-06 26.3 0.2 6.1e-06 25.7 0.2 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 1.2e-05 25.0 0.3 0.00011 21.9 0.2 2.1 1 1 1 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 8.2e-05 22.1 0.0 0.0085 15.4 0.0 2.2 2 0 0 2 2 2 2 Kinase-like DUF3347 PF11827.8 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 0.0053 17.0 0.1 0.0094 16.2 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3347) Kdo PF06293.14 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 0.0067 15.8 0.2 0.022 14.1 0.2 1.9 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Omp28 PF11551.8 NODE_17413_length_1060_cov_375.298537_g4136_i3reverse_frame_3 - 0.11 12.4 0.1 1.8 8.4 0.0 2.2 2 0 0 2 2 2 0 Outer membrane protein Omp28 TPR_MLP1_2 PF07926.12 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 5.8e-05 23.2 78.9 0.02 14.9 11.5 4.5 1 1 3 4 4 4 3 TPR/MLP1/MLP2-like protein DivIC PF04977.15 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 0.0071 16.1 2.4 0.0071 16.1 2.4 6.3 3 2 3 6 6 6 2 Septum formation initiator Cnn_1N PF07989.11 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 0.029 14.5 4.9 0.029 14.5 4.9 6.6 1 1 3 4 4 2 0 Centrosomin N-terminal motif 1 BLOC1_2 PF10046.9 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 0.051 13.9 67.7 0.16 12.3 5.4 5.9 2 2 3 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ATG16 PF08614.11 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 0.1 12.8 70.5 1.1 9.5 12.1 5.0 1 1 4 5 5 5 0 Autophagy protein 16 (ATG16) TACC_C PF05010.14 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 0.26 11.0 71.1 0.63 9.8 2.1 4.8 1 1 3 4 4 4 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal ADIP PF11559.8 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 0.27 11.3 78.1 0.12 12.5 10.9 5.1 1 1 4 5 5 5 0 Afadin- and alpha -actinin-Binding DUF4200 PF13863.6 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 0.47 10.9 88.9 0.05 14.0 20.2 4.8 1 1 4 5 5 5 0 Domain of unknown function (DUF4200) HOOK PF05622.12 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 0.66 8.0 78.5 0.19 9.8 31.4 2.4 1 1 1 2 2 2 0 HOOK protein HrpB7 PF09486.10 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 0.91 9.9 27.8 6.9 7.0 11.0 3.7 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) Spc7 PF08317.11 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 1 8.2 80.5 0.68 8.8 28.2 4.0 1 1 3 4 4 4 0 Spc7 kinetochore protein GAS PF13851.6 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 1.3 8.3 83.8 0.52 9.6 7.9 4.1 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding DUF3450 PF11932.8 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 2.3 7.5 69.9 0.072 12.4 20.8 4.8 1 1 4 6 6 6 0 Protein of unknown function (DUF3450) Hrs_helical PF12210.8 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 2.3 8.8 45.5 0.16 12.5 2.9 5.5 2 2 3 5 5 5 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Tropomyosin_1 PF12718.7 NODE_17403_length_1061_cov_2.867446_g13264_i0reverse_frame_3 - 9.1 6.4 83.8 4.1 7.6 6.7 4.4 1 1 3 4 4 4 0 Tropomyosin like DUF4407 PF14362.6 ORF98117 - 2.7 7.3 18.6 2.3 7.5 5.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Nicastrin PF05450.15 ORF93915 - 0.091 12.2 4.9 0.059 12.8 3.1 1.6 1 1 0 1 1 1 0 Nicastrin Rhodanese PF00581.20 ORF88265 - 0.0025 18.3 0.0 0.0065 17.0 0.0 1.8 1 1 0 1 1 1 1 Rhodanese-like domain Fer4_12 PF13353.6 ORF87709 - 0.14 12.5 0.3 0.5 10.6 0.0 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Met_asp_mut_E PF06368.11 ORF85370 - 0.015 13.8 1.0 0.023 13.2 1.0 1.2 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) DUF3864 PF12980.7 ORF85370 - 2.1 8.7 4.8 29 5.1 0.2 3.1 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3864) Patatin PF01734.22 ORF83148 - 4.8e-23 82.4 0.0 1.5e-22 80.8 0.0 1.8 1 1 0 1 1 1 1 Patatin-like phospholipase Ldh_1_C PF02866.18 ORF79453 - 1.5e-43 148.6 0.1 4.5e-43 147.1 0.0 1.7 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 ORF79453 - 2.4e-33 115.2 0.1 3.4e-33 114.7 0.1 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain 3Beta_HSD PF01073.19 ORF79453 - 0.041 12.9 0.0 0.089 11.8 0.0 1.5 1 1 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family His_Phos_2 PF00328.22 ORF75161 - 1.6e-13 50.8 0.3 2e-13 50.4 0.3 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) DDE_1 PF03184.19 ORF70167 - 2.2e-15 56.7 0.1 3.6e-15 56.1 0.1 1.3 1 0 0 1 1 1 1 DDE superfamily endonuclease MLANA PF14991.6 ORF6804 - 0.034 14.4 0.0 0.064 13.5 0.0 1.4 1 0 0 1 1 1 0 Protein melan-A WD40 PF00400.32 ORF65659 - 5.5e-06 27.0 2.7 0.013 16.3 0.0 4.8 5 0 0 5 5 5 1 WD domain, G-beta repeat PQQ_3 PF13570.6 ORF65659 - 0.00014 22.2 5.0 0.12 12.9 0.8 3.8 2 1 2 4 4 4 2 PQQ-like domain PQQ_2 PF13360.6 ORF65659 - 0.0015 18.2 0.8 0.0089 15.6 0.7 2.1 2 1 0 2 2 2 1 PQQ-like domain Patatin PF01734.22 ORF65172 - 3.4e-19 69.8 0.7 6.7e-18 65.6 0.4 2.5 2 1 0 2 2 2 1 Patatin-like phospholipase adh_short_C2 PF13561.6 ORF62664 - 5.2e-31 108.0 0.0 2e-21 76.6 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF62664 - 6.7e-29 100.7 0.0 9.1e-29 100.3 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF62664 - 1.6e-06 28.2 0.0 2.9e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF62664 - 0.0016 17.6 0.0 0.0021 17.2 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein GDP_Man_Dehyd PF16363.5 ORF62664 - 0.0078 15.7 0.0 0.015 14.7 0.0 1.5 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_7 PF13241.6 ORF62664 - 0.0096 16.4 0.0 0.017 15.5 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding Epimerase PF01370.21 ORF62664 - 0.013 14.9 0.0 0.061 12.8 0.0 1.9 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family Shikimate_DH PF01488.20 ORF62664 - 0.018 15.1 0.1 0.038 14.0 0.1 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NmrA PF05368.13 ORF62664 - 0.036 13.6 0.1 0.085 12.4 0.0 1.6 2 0 0 2 2 2 0 NmrA-like family NAD_binding_10 PF13460.6 ORF62664 - 0.045 13.6 0.0 0.075 12.9 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding 3Beta_HSD PF01073.19 ORF62664 - 0.048 12.7 0.0 0.077 12.0 0.0 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family 2-Hacid_dh_C PF02826.19 ORF62664 - 0.1 11.9 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Periviscerokin PF08259.11 ORF62664 - 0.4 11.1 1.5 1 9.8 1.5 1.7 1 0 0 1 1 1 0 Periviscerokinin family UCH PF00443.29 ORF58270 - 2.6e-28 99.2 3.6 4.4e-28 98.5 3.6 1.4 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF58270 - 4.5e-09 36.3 4.6 2.9e-08 33.7 1.5 2.2 1 1 1 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase zf-MIZ PF02891.20 ORF58270 - 0.0057 16.4 0.3 0.011 15.4 0.3 1.4 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger zinc_ribbon_11 PF11682.8 ORF58270 - 0.11 12.5 3.4 0.16 12.0 1.2 2.2 2 0 0 2 2 2 0 Probable zinc-ribbon U-box PF04564.15 ORF57328 - 3.1e-09 36.9 0.5 1.6e-08 34.6 0.1 2.4 3 0 0 3 3 3 1 U-box domain Latarcin PF10279.9 ORF57328 - 0.0019 18.5 3.4 0.82 10.1 0.0 3.4 2 2 1 3 3 3 1 Latarcin precursor TraI_2_C PF07515.11 ORF57328 - 0.38 10.7 3.6 0.77 9.7 0.4 2.4 1 1 0 2 2 2 0 Putative conjugal transfer nickase/helicase TraI C-term Sas6_CC PF18594.1 ORF57328 - 3.5 7.5 9.6 3.2 7.6 0.2 3.4 3 1 0 3 3 3 0 Sas6/XLF/XRCC4 coiled-coil domain RsbU_N PF08673.10 ORF57328 - 4.1 7.6 6.8 0.42 10.7 0.3 2.8 3 0 0 3 3 3 0 Phosphoserine phosphatase RsbU, N-terminal domain PhyH PF05721.13 ORF56301 - 3.1e-46 158.3 0.0 4e-46 157.9 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) DnaJ PF00226.31 ORF53652 - 5.4e-14 52.1 0.0 1.8e-13 50.4 0.0 1.9 2 0 0 2 2 2 1 DnaJ domain WW PF00397.26 ORF53652 - 0.00095 19.2 0.0 0.32 11.1 0.1 2.6 2 0 0 2 2 2 2 WW domain Citrate_synt PF00285.21 ORF48762 - 9.4e-104 347.3 0.0 1.1e-103 347.2 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain PhyH PF05721.13 ORF46425 - 0.00015 22.1 0.0 0.047 14.0 0.0 2.3 2 0 0 2 2 2 2 Phytanoyl-CoA dioxygenase (PhyH) CENP-F_C_Rb_bdg PF10490.9 ORF46425 - 0.052 13.0 0.0 0.28 10.7 0.0 2.1 2 0 0 2 2 2 0 Rb-binding domain of kinetochore protein Cenp-F/LEK1 Lactamase_B PF00753.27 ORF43432 - 4.6e-15 56.2 1.3 5.5e-14 52.6 1.3 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 ORF43432 - 0.00033 20.2 0.0 0.0054 16.3 0.0 2.2 2 0 0 2 2 2 1 Beta-lactamase superfamily domain BLACT_WH PF17778.1 ORF43432 - 0.12 12.4 0.0 0.35 10.9 0.0 1.8 2 0 0 2 2 2 0 Beta-lactamase associated winged helix domain MFS_1 PF07690.16 ORF38984 - 2.7e-08 33.1 6.5 4.1e-07 29.3 5.4 2.0 2 0 0 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF38984 - 0.0068 15.0 4.2 0.014 14.0 4.2 1.6 1 1 0 1 1 1 1 MFS/sugar transport protein MFS_1_like PF12832.7 ORF38984 - 0.063 12.1 6.1 0.035 13.0 3.9 1.6 2 0 0 2 2 2 0 MFS_1 like family NIL PF09383.10 ORF38984 - 0.2 11.5 0.0 5.2 7.0 0.0 2.2 2 0 0 2 2 2 0 NIL domain Cupin_8 PF13621.6 ORF35838 - 3.1e-21 76.3 0.0 5.7e-20 72.1 0.0 2.2 1 1 0 1 1 1 1 Cupin-like domain JmjC PF02373.22 ORF35838 - 6.4e-18 65.2 0.0 1.6e-17 64.0 0.0 1.7 2 0 0 2 2 2 1 JmjC domain, hydroxylase Cupin_4 PF08007.12 ORF35838 - 0.01 15.4 0.0 0.02 14.4 0.0 1.5 2 0 0 2 2 2 0 Cupin superfamily protein Patatin PF01734.22 ORF3142 - 1.7e-19 70.8 0.7 6.7e-18 65.6 0.4 2.7 2 1 0 2 2 2 1 Patatin-like phospholipase Peptidase_S24 PF00717.23 ORF2942 - 1.5e-12 47.3 0.1 4.5e-12 45.8 0.1 1.9 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 ORF2942 - 4.9e-12 45.8 0.0 8.6e-12 45.0 0.0 1.4 1 0 0 1 1 1 1 Signal peptidase, peptidase S26 Nif11 PF07862.11 ORF2942 - 0.11 12.9 0.0 0.21 11.9 0.0 1.5 1 0 0 1 1 1 0 Nif11 domain DivIC PF04977.15 ORF28443 - 0.0065 16.2 3.7 0.0065 16.2 3.7 4.8 2 1 1 4 4 4 1 Septum formation initiator FlaC_arch PF05377.11 ORF28443 - 0.015 15.6 5.4 0.015 15.6 5.4 3.2 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) V-SNARE_C PF12352.8 ORF28443 - 0.022 15.0 0.2 0.076 13.3 0.2 2.0 1 0 0 1 1 1 0 Snare region anchored in the vesicle membrane C-terminus YabA PF06156.13 ORF28443 - 0.023 15.3 4.3 0.023 15.3 4.3 3.7 2 1 1 3 3 3 0 Initiation control protein YabA FAM184 PF15665.5 ORF28443 - 0.2 11.4 41.3 0.3 10.8 41.3 1.2 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B ADP_ribosyl_GH PF03747.14 ORF23061 - 4.5e-19 69.3 0.0 6e-19 68.9 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase DUF5096 PF17019.5 ORF2131 - 0.12 12.1 0.2 0.25 11.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5096) AA_permease PF00324.21 ORF17572 - 4e-90 302.7 28.7 4.8e-90 302.4 28.7 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF17572 - 8.7e-39 133.5 30.4 1e-38 133.3 30.4 1.0 1 0 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 ORF17572 - 0.00062 18.7 10.0 0.0011 17.9 10.1 1.3 1 1 0 1 1 1 1 Spore germination protein Tubulin PF00091.25 ORF16086 - 0.11 12.7 2.3 0.23 11.6 2.3 1.5 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain Channel_Tsx PF03502.13 ORF152500 - 3.1e-82 276.0 20.8 3.6e-82 275.8 20.8 1.0 1 0 0 1 1 1 1 Nucleoside-specific channel-forming protein, Tsx LPAM_1 PF08139.12 ORF152500 - 0.0021 18.5 2.1 0.0041 17.5 2.1 1.5 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site PmbA_TldD PF01523.16 ORF152002 - 7e-54 183.6 0.1 1.5e-53 182.5 0.1 1.5 2 0 0 2 2 2 1 Putative modulator of DNA gyrase adh_short PF00106.25 ORF137678 - 1.4e-14 54.0 0.1 2e-13 50.3 0.0 2.1 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF137678 - 9.4e-10 38.4 0.1 1.5e-09 37.7 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase FF PF01846.19 ORF136080 - 1.3e-21 76.5 14.4 2e-08 34.3 0.0 4.6 4 0 0 4 4 4 4 FF domain FlbT PF07378.11 ORF136080 - 0.0023 18.0 1.6 0.005 16.9 0.2 2.1 2 0 0 2 2 2 1 Flagellar protein FlbT NiFe-hyd_HybE PF11939.8 ORF12670 - 0.14 12.1 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 [NiFe]-hydrogenase assembly, chaperone, HybE GFO_IDH_MocA PF01408.22 ORF11793 - 6.5e-14 52.8 0.0 1.1e-13 52.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Epiglycanin_TR PF05647.11 NODE_17631_length_1054_cov_3.600589_g13426_i0forward_frame_1 - 2.4 8.1 8.8 0.17 11.8 2.8 2.2 3 0 0 3 3 3 0 Tandem-repeating region of mucin, epiglycanin-like Pentapeptide_2 PF01469.18 NODE_17491_length_1058_cov_238.711632_g1699_i3forward_frame_3 - 0.18 11.8 15.6 0.22 11.5 4.7 2.7 1 1 1 2 2 2 0 Pentapeptide repeats (8 copies) TIG PF01833.24 ORF95093 - 9.7e-14 51.2 3.7 2.5e-09 37.1 0.0 2.8 3 0 0 3 3 3 2 IPT/TIG domain TIG_plexin PF17960.1 ORF95093 - 3e-07 30.3 0.0 0.019 15.0 0.1 2.3 2 0 0 2 2 2 2 TIG domain DUF4381 PF14316.6 ORF95093 - 0.17 12.1 0.6 0.27 11.4 0.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) HemY_N PF07219.13 ORF95093 - 0.24 11.6 0.3 0.36 11.0 0.3 1.2 1 0 0 1 1 1 0 HemY protein N-terminus Peptidase_C1 PF00112.23 ORF92915 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF92915 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF92915 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF92915 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein TPR_9 PF13371.6 ORF91062 - 0.032 14.4 0.1 0.33 11.1 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF91062 - 0.081 13.8 0.0 0.19 12.6 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat Peptidase_C1 PF00112.23 ORF87122 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF87122 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF87122 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF87122 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein DUF745 PF05335.13 ORF77989 - 0.099 12.4 0.1 0.099 12.4 0.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF745) Cupin_8 PF13621.6 ORF68834 - 1e-15 58.1 1.9 4.8e-15 56.0 0.2 2.3 2 1 0 2 2 2 1 Cupin-like domain JmjC PF02373.22 ORF68834 - 0.00039 20.8 0.0 0.014 15.9 0.0 2.5 1 1 0 1 1 1 1 JmjC domain, hydroxylase Cupin_1 PF00190.22 ORF68834 - 0.021 14.4 0.0 0.03 13.9 0.0 1.3 1 0 0 1 1 1 0 Cupin Cupin_4 PF08007.12 ORF68834 - 0.074 12.5 0.0 0.16 11.4 0.0 1.5 1 0 0 1 1 1 0 Cupin superfamily protein Peptidase_C1 PF00112.23 ORF68156 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF68156 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF68156 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF68156 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein Mob_synth_C PF06463.13 ORF65025 - 2.4e-39 134.2 0.0 4.6e-39 133.3 0.0 1.5 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 ORF65025 - 7.6e-29 101.2 0.0 1e-28 100.8 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 ORF65025 - 2.1e-07 31.3 0.0 4e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 ORF65025 - 0.00037 20.6 0.0 0.00091 19.4 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF1272 PF06906.11 ORF65025 - 0.075 13.1 2.8 7.6 6.7 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) DUF3165 PF11364.8 ORF60227 - 0.025 14.9 0.5 0.025 14.9 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3165) p450 PF00067.22 ORF50703 - 1.2e-62 212.2 0.0 1.5e-62 211.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Patatin PF01734.22 ORF37106 - 1e-23 84.6 1.0 1.5e-23 84.0 1.0 1.3 1 0 0 1 1 1 1 Patatin-like phospholipase DUF285 PF03382.14 ORF30164 - 2.4e-62 208.1 24.4 8.1e-34 116.0 7.3 2.4 1 1 1 2 2 2 2 Mycoplasma protein of unknown function, DUF285 DUF2787 PF10980.8 ORF30164 - 0.14 12.3 0.1 7.2 6.8 0.0 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF2787) Peptidase_C1 PF00112.23 ORF29551 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF29551 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF29551 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF29551 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein EamA PF00892.20 ORF26333 - 8.7e-20 71.3 36.4 2.1e-12 47.4 14.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF998 PF06197.13 ORF26333 - 0.091 12.3 2.9 0.18 11.4 2.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF998) PRT_C PF08372.10 ORF17040 - 0.0054 16.5 0.2 0.011 15.5 0.2 1.5 1 1 0 1 1 1 1 Plant phosphoribosyltransferase C-terminal FAM199X PF15814.5 ORF15435 - 1.2 8.1 7.0 1.8 7.6 7.0 1.2 1 0 0 1 1 1 0 Protein family FAM199X Pkinase PF00069.25 ORF151594 - 2.5e-39 135.2 0.1 4.1e-39 134.5 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF151594 - 4.2e-27 95.0 0.1 6.1e-27 94.5 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF151594 - 3.2e-05 22.9 0.0 5.3e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF151594 - 9.7e-05 21.8 0.0 0.00017 21.0 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF151594 - 0.001 18.1 0.1 0.0029 16.6 0.0 1.7 2 0 0 2 2 2 1 Haspin like kinase domain Ku_PK_bind PF08785.11 ORF151594 - 0.052 13.7 0.1 0.17 12.1 0.0 1.8 2 0 0 2 2 2 0 Ku C terminal domain like FA_hydroxylase PF04116.13 ORF148908 - 4.6e-21 75.6 15.2 4.6e-21 75.6 15.2 2.3 2 2 1 3 3 3 1 Fatty acid hydroxylase superfamily Peptidase_C1 PF00112.23 ORF148372 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF148372 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF148372 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF148372 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein Aa_trans PF01490.18 ORF147755 - 1.2e-13 50.6 14.8 2.6e-13 49.5 14.8 1.5 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein DUF2304 PF10066.9 ORF147755 - 8.3 6.7 9.4 25 5.2 0.8 2.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) WD40 PF00400.32 ORF147591 - 3.8e-19 68.7 4.1 1e-05 26.1 0.2 5.6 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF147591 - 1.2e-09 38.4 0.3 0.19 12.0 0.0 6.0 2 2 5 7 7 7 2 Anaphase-promoting complex subunit 4 WD40 domain Kelch_5 PF13854.6 ORF147591 - 0.0076 16.2 0.6 15 5.7 0.0 3.3 3 0 0 3 3 3 2 Kelch motif Nup160 PF11715.8 ORF147591 - 0.008 14.9 0.1 4.1 5.9 0.0 2.8 2 1 1 3 3 3 2 Nucleoporin Nup120/160 TIMP PF00965.17 ORF147591 - 0.047 13.5 0.2 0.31 10.8 0.0 2.4 2 1 0 2 2 2 0 Tissue inhibitor of metalloproteinase MORN PF02493.20 ORF146854 - 1.3e-50 166.3 71.4 5.9e-08 32.2 0.4 10.9 10 1 0 10 10 10 9 MORN repeat IQ PF00612.27 ORF146854 - 0.048 13.5 0.1 0.099 12.5 0.1 1.5 1 0 0 1 1 1 0 IQ calmodulin-binding motif p25-alpha PF05517.12 ORF146854 - 0.14 12.3 4.8 6.7 6.9 0.9 2.8 1 1 2 3 3 3 0 p25-alpha DUF1741 PF08427.10 ORF146854 - 0.22 11.1 1.0 0.3 10.7 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1741) Peptidase_C26 PF07722.13 ORF146762 - 5.5e-21 75.3 0.0 6.4e-20 71.8 0.0 2.2 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF146762 - 2.2e-08 34.1 0.0 1.2e-07 31.7 0.0 2.0 2 0 0 2 2 2 1 Glutamine amidotransferase class-I 5_nucleotid_C PF02872.18 ORF145518 - 3.9e-36 124.6 0.0 6.3e-36 124.0 0.0 1.3 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain DUF1533 PF07550.11 ORF145518 - 0.084 12.8 0.3 0.72 9.8 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1533) Peptidase_C1 PF00112.23 ORF140270 - 8.3e-50 169.9 0.8 1.1e-49 169.4 0.8 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF140270 - 1.9e-12 47.4 4.9 3.4e-12 46.6 4.9 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF140270 - 0.00028 19.8 1.8 0.0062 15.4 0.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FeoB_associated PF12669.7 ORF140270 - 2.9 8.3 6.5 40 4.7 0.1 3.3 3 0 0 3 3 3 0 FeoB-associated Cys-rich membrane protein Sigma_reg_N PF13800.6 ORF132429 - 0.0049 17.1 0.1 0.019 15.3 0.0 2.0 2 0 0 2 2 2 1 Sigma factor regulator N-terminal TssO PF17561.2 ORF132429 - 0.013 15.6 0.2 0.034 14.2 0.2 1.7 1 0 0 1 1 1 0 Type VI secretion system, TssO TMEM51 PF15345.6 ORF132429 - 0.025 14.4 0.2 0.1 12.4 0.0 1.9 2 1 1 3 3 3 0 Transmembrane protein 51 Orthoreo_P10 PF07204.11 ORF132429 - 0.096 12.7 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DUF4834 PF16118.5 ORF132429 - 0.12 13.4 0.0 0.12 13.4 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) Holin_BlyA PF05102.12 ORF132429 - 0.27 11.2 2.5 0.49 10.4 2.5 1.4 1 0 0 1 1 1 0 holin, BlyA family He_PIG PF05345.12 ORF132429 - 6.3 7.1 21.4 0.1 12.8 6.8 3.6 1 1 2 3 3 3 0 Putative Ig domain p450 PF00067.22 ORF13080 - 3.2e-49 167.9 0.9 4.8e-49 167.4 0.9 1.2 1 0 0 1 1 1 1 Cytochrome P450 PPR PF01535.20 ORF124682 - 1.5e-17 62.5 3.2 6.5e-06 26.0 0.0 6.1 7 0 0 7 7 7 3 PPR repeat PPR_2 PF13041.6 ORF124682 - 1.6e-15 57.0 3.2 1.7e-06 28.1 0.4 4.3 3 1 3 6 6 6 4 PPR repeat family PPR_3 PF13812.6 ORF124682 - 1.4e-10 41.1 0.0 0.00014 21.9 0.0 3.9 3 1 0 4 4 4 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF124682 - 2.9e-08 33.3 0.4 5.8e-05 22.7 0.0 3.2 3 0 0 3 3 3 2 PPR repeat PPR_long PF17177.4 ORF124682 - 0.0019 17.6 0.0 0.011 15.1 0.0 2.0 1 1 1 2 2 2 1 Pentacotripeptide-repeat region of PRORP ATP-sulfurylase PF01747.17 ORF122632 - 3.3e-59 199.9 0.0 4.3e-59 199.6 0.0 1.1 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.6 ORF122632 - 3.2e-20 72.4 0.4 4.3e-19 68.7 0.0 2.5 3 0 0 3 3 3 1 PUA-like domain CTP_transf_like PF01467.26 ORF122632 - 0.13 12.4 0.0 0.3 11.3 0.0 1.7 1 1 0 1 1 1 0 Cytidylyltransferase-like # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks46.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks46.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks46.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks46.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:25:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TRP PF06011.12 ORF115854 - 1.3 7.7 25.1 0.043 12.5 14.9 2.4 2 1 0 3 3 3 0 Transient receptor potential (TRP) ion channel DUF3165 PF11364.8 ORF115795 - 0.025 14.9 0.5 0.025 14.9 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3165) Carb_anhydrase PF00194.21 ORF112015 - 2.1e-31 109.4 0.6 3.4e-31 108.7 0.6 1.3 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMIE PF16038.5 ORF112015 - 0.028 14.3 0.2 0.07 13.0 0.2 1.6 1 0 0 1 1 1 0 TMIE protein DUF3344 PF11824.8 ORF112015 - 0.1 12.2 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3344) JAB PF01398.21 ORF110427 - 2.2e-27 95.4 0.0 5.1e-27 94.2 0.0 1.7 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease CSN5_C PF18323.1 ORF110427 - 7.6e-09 36.4 0.6 1.9e-08 35.1 0.3 1.8 2 0 0 2 2 2 1 Cop9 signalosome subunit 5 C-terminal domain Prok-JAB PF14464.6 ORF110427 - 0.0074 16.1 0.0 0.017 14.9 0.0 1.6 1 1 0 1 1 1 1 Prokaryotic homologs of the JAB domain ADH_N PF08240.12 ORF105308 - 2.5e-27 94.9 5.6 4.5e-27 94.1 5.6 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF105308 - 3.2e-26 91.8 0.1 5.4e-26 91.1 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF105308 - 4.9e-07 30.9 0.0 1.1e-06 29.8 0.0 1.6 2 0 0 2 2 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 ORF105308 - 7e-07 28.8 0.2 1.2e-06 28.0 0.2 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 ORF105308 - 1.2e-05 24.7 0.0 2e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF105308 - 0.00057 20.1 0.1 0.001 19.3 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Oxidored_nitro PF00148.19 ORF105308 - 0.0016 17.2 0.0 0.0024 16.7 0.0 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Glu_dehyd_C PF16912.5 ORF105308 - 0.013 15.0 0.0 0.02 14.4 0.0 1.3 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus Shikimate_DH PF01488.20 ORF105308 - 0.015 15.4 0.0 0.03 14.4 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF105308 - 0.056 13.7 0.2 0.18 12.0 0.1 1.8 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain Methyltransf_11 PF08241.12 ORF105308 - 0.062 13.9 0.1 0.13 13.0 0.1 1.5 1 0 0 1 1 1 0 Methyltransferase domain 3HCDH_N PF02737.18 ORF105308 - 0.16 11.8 0.3 0.25 11.2 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RVT_1 PF00078.27 NODE_17631_length_1054_cov_3.600589_g13426_i0forward_frame_3 - 6.9e-17 61.7 0.0 9.7e-17 61.2 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) APOBEC1 PF18769.1 ORF99300 - 0.034 14.4 0.1 0.35 11.1 0.0 2.6 3 0 0 3 3 3 0 APOBEC1 DUF4385 PF14328.6 ORF99300 - 0.14 12.2 3.0 0.24 11.5 0.4 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4385) WD40 PF00400.32 ORF98900 - 9.7e-09 35.7 0.2 0.029 15.2 0.0 5.0 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF98900 - 0.0042 17.3 0.0 0.14 12.5 0.0 3.1 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF98900 - 0.019 14.7 0.1 0.032 14.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) WD40 PF00400.32 ORF92318 - 9.7e-09 35.7 0.2 0.029 15.2 0.0 5.0 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF92318 - 0.0042 17.3 0.0 0.14 12.5 0.0 3.1 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF92318 - 0.019 14.7 0.1 0.032 14.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) LUC7 PF03194.15 ORF90248 - 1.6e-67 227.8 17.6 2.3e-67 227.3 17.6 1.2 1 0 0 1 1 1 1 LUC7 N_terminus Baculo_PEP_C PF04513.12 ORF90248 - 0.13 12.3 2.3 0.83 9.7 1.0 2.4 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Glyco_hydro_80 PF13647.6 ORF90248 - 0.13 11.7 0.1 0.2 11.1 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A Apolipoprotein PF01442.18 ORF90248 - 0.14 12.1 7.4 1 9.2 7.4 2.2 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain YtxH PF12732.7 ORF90248 - 0.47 11.0 9.2 0.93 10.1 2.1 3.3 2 1 1 3 3 3 0 YtxH-like protein Atypical_Card PF18461.1 ORF90248 - 0.64 10.3 2.7 0.69 10.2 0.7 2.1 2 0 0 2 2 2 0 Atypical caspase recruitment domain RGS-like PF09128.11 ORF90248 - 0.65 9.7 9.7 0.27 10.9 6.3 2.0 1 1 1 2 2 2 0 Regulator of G protein signalling-like domain DUF883 PF05957.13 ORF90248 - 4.1 8.1 6.3 16 6.2 0.2 3.3 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) Peptidase_C1 PF00112.23 ORF90131 - 1e-75 254.6 2.3 1.6e-75 253.9 2.3 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF90131 - 2e-06 26.9 0.4 0.0053 15.6 0.2 2.3 2 0 0 2 2 2 2 Peptidase C1-like family Inhibitor_I29 PF08246.12 ORF90131 - 5.6e-06 26.7 1.6 9.8e-06 25.9 0.5 2.0 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) DHHC PF01529.20 ORF89642 - 7.2e-32 110.3 14.7 7.2e-32 110.3 14.7 2.0 2 0 0 2 2 2 1 DHHC palmitoyltransferase zf-RanBP PF00641.18 ORF89642 - 0.068 12.5 0.3 0.068 12.5 0.3 2.5 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others NmrA PF05368.13 ORF83623 - 8e-25 87.7 0.2 9.6e-25 87.5 0.2 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 ORF83623 - 8.8e-11 42.0 0.1 1.2e-10 41.6 0.1 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 ORF83623 - 6.1e-05 22.6 0.0 8.9e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family WD40 PF00400.32 ORF80832 - 9.7e-09 35.7 0.2 0.029 15.2 0.0 5.0 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF80832 - 0.0042 17.3 0.0 0.14 12.5 0.0 3.1 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF80832 - 0.019 14.7 0.1 0.032 14.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) Stap_Strp_toxin PF01123.20 ORF79774 - 9.1 7.2 13.2 0.31 11.9 1.6 3.4 2 1 1 3 3 3 0 Staphylococcal/Streptococcal toxin, OB-fold domain Cation_efflux PF01545.21 ORF76861 - 4.2e-11 42.9 0.0 9.3e-06 25.5 0.0 2.0 2 0 0 2 2 2 2 Cation efflux family DUF2529 PF10740.9 ORF76861 - 0.13 11.9 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) BofC_C PF08955.10 ORF76861 - 0.14 12.2 0.0 0.34 11.0 0.0 1.6 1 0 0 1 1 1 0 BofC C-terminal domain Ras PF00071.22 ORF71738 - 2e-38 131.5 0.0 2.6e-38 131.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF71738 - 1.1e-19 70.8 0.0 1.9e-19 70.1 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF71738 - 8.6e-10 38.3 0.0 1.4e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF71738 - 3.7e-06 27.0 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase SAP PF02037.27 ORF71738 - 0.0074 16.0 0.5 0.11 12.3 0.2 2.3 2 0 0 2 2 2 1 SAP domain HeH PF12949.7 ORF71738 - 0.019 14.7 0.0 0.032 13.9 0.0 1.4 1 0 0 1 1 1 0 HeH/LEM domain Armet PF10208.9 ORF71738 - 0.066 13.1 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding AAA_33 PF13671.6 ORF71738 - 0.13 12.4 0.0 0.36 11.0 0.0 1.8 1 1 0 1 1 1 0 AAA domain DUF1440 PF07274.12 ORF69844 - 0.5 10.7 4.4 9.4 6.6 0.0 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1440) PBP_like_2 PF12849.7 ORF66573 - 2.7e-24 86.3 0.6 4.3e-24 85.7 0.6 1.3 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_6 PF13343.6 ORF66573 - 0.066 12.6 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein GTP_EFTU_D3 PF03143.17 ORF65406 - 2.7e-35 121.1 0.0 4.1e-35 120.5 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF65406 - 6.5e-07 29.6 1.0 1.4e-06 28.6 1.0 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.6 ORF65406 - 0.0019 18.1 2.2 0.0032 17.3 0.4 2.2 2 1 0 2 2 2 1 Elongation factor Tu domain 4 Flu_NS1 PF00600.19 ORF61230 - 0.077 12.6 0.1 0.2 11.2 0.2 1.5 2 0 0 2 2 2 0 Influenza non-structural protein (NS1) MAS20 PF02064.15 ORF61230 - 0.4 10.8 6.5 0.9 9.6 6.5 1.6 1 0 0 1 1 1 0 MAS20 protein import receptor SVIP PF15811.5 ORF61230 - 0.49 10.9 6.7 1.2 9.6 0.1 2.3 2 0 0 2 2 2 0 Small VCP/p97-interacting protein Ndc1_Nup PF09531.10 ORF61230 - 1.8 7.2 9.2 0.025 13.3 1.5 1.7 2 0 0 2 2 2 0 Nucleoporin protein Ndc1-Nup PfkB PF00294.24 ORF60592 - 4.9e-43 147.6 0.1 6.4e-43 147.2 0.1 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HTH_Tnp_Tc5 PF03221.16 ORF57940 - 1.4e-10 41.1 0.3 2.9e-10 40.0 0.3 1.5 1 0 0 1 1 1 1 Tc5 transposase DNA-binding domain zf-RING_2 PF13639.6 ORF56559 - 1.2e-11 44.7 9.5 1.2e-11 44.7 9.5 2.8 3 0 0 3 3 3 1 Ring finger domain zf-rbx1 PF12678.7 ORF56559 - 3.3e-07 30.5 6.8 3.3e-07 30.5 6.8 2.5 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF56559 - 3.3e-06 26.7 8.5 1e-05 25.2 8.5 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF56559 - 4.7e-05 23.3 1.4 4.7e-05 23.3 1.4 2.8 2 1 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF56559 - 0.00013 21.7 6.3 0.00013 21.7 6.3 3.0 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF56559 - 0.00073 19.3 7.7 0.00073 19.3 7.7 3.2 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF56559 - 0.0042 17.0 7.9 0.0042 17.0 7.9 3.2 3 0 0 3 3 3 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF56559 - 0.022 14.8 3.3 0.022 14.8 3.3 2.0 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger TMEM154 PF15102.6 ORF56559 - 0.095 12.6 0.3 0.095 12.6 0.3 3.0 3 1 1 4 4 4 0 TMEM154 protein family TMEM52 PF14979.6 ORF56559 - 6.8 6.6 10.4 0.061 13.2 1.8 2.0 2 0 0 2 2 2 0 Transmembrane 52 CASP_C PF08172.12 ORF5645 - 0.12 11.7 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 CASP C terminal SDA1 PF05285.12 ORF55434 - 0.00074 19.0 5.1 0.001 18.6 5.1 1.3 1 0 0 1 1 1 1 SDA1 SPX PF03105.19 ORF55434 - 0.0017 18.4 7.6 0.0018 18.3 7.6 1.2 1 0 0 1 1 1 1 SPX domain Presenilin PF01080.17 ORF55434 - 0.031 13.1 6.2 0.045 12.5 6.2 1.2 1 0 0 1 1 1 0 Presenilin HTH_Tnp_Tc5 PF03221.16 ORF5069 - 1.3e-10 41.2 0.3 2.9e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Tc5 transposase DNA-binding domain DYW_deaminase PF14432.6 ORF5069 - 0.026 14.4 2.0 0.038 13.9 0.8 1.8 1 1 1 2 2 2 0 DYW family of nucleic acid deaminases LRR_6 PF13516.6 ORF4988 - 1.1e-20 71.8 5.6 0.00031 20.6 0.1 5.5 5 0 0 5 5 5 5 Leucine Rich repeat LRR_1 PF00560.33 ORF4988 - 1.2e-06 28.3 0.6 2.7 8.9 0.0 5.2 5 0 0 5 5 5 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF4988 - 2.5e-05 24.6 5.5 0.00037 20.8 1.2 4.4 2 2 3 5 5 5 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF4988 - 0.018 14.8 9.5 1.1 9.1 5.4 4.4 3 1 1 4 4 4 0 Leucine rich repeat RRM_1 PF00076.22 ORF4988 - 0.03 14.2 0.0 0.064 13.1 0.0 1.6 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) EMC3_TMCO1 PF01956.16 ORF48774 - 0.27 11.0 0.0 0.27 11.0 0.0 1.7 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like TACI-CRD2 PF09305.10 ORF47174 - 0.047 13.7 8.6 0.22 11.6 8.7 2.1 1 1 0 1 1 1 0 TACI, cysteine-rich domain Ras PF00071.22 ORF42124 - 2e-38 131.5 0.0 2.6e-38 131.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF42124 - 1.1e-19 70.8 0.0 1.9e-19 70.1 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF42124 - 8.6e-10 38.3 0.0 1.4e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF42124 - 3.7e-06 27.0 0.0 5.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase SAP PF02037.27 ORF42124 - 0.0074 16.0 0.5 0.11 12.3 0.2 2.3 2 0 0 2 2 2 1 SAP domain HeH PF12949.7 ORF42124 - 0.019 14.7 0.0 0.032 13.9 0.0 1.4 1 0 0 1 1 1 0 HeH/LEM domain Armet PF10208.9 ORF42124 - 0.066 13.1 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding AAA_33 PF13671.6 ORF42124 - 0.13 12.4 0.0 0.36 11.0 0.0 1.8 1 1 0 1 1 1 0 AAA domain TRAM_LAG1_CLN8 PF03798.16 ORF40106 - 7.2e-24 84.6 22.1 7.2e-24 84.6 22.1 2.0 2 0 0 2 2 2 1 TLC domain Ist1 PF03398.14 ORF39254 - 7e-16 58.6 3.8 8.6e-16 58.3 3.8 1.1 1 0 0 1 1 1 1 Regulator of Vps4 activity in the MVB pathway DUF2959 PF11172.8 ORF3649 - 0.018 15.2 1.8 0.018 15.2 1.8 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2959) Unstab_antitox PF09720.10 ORF3649 - 0.021 14.9 0.2 11 6.2 0.1 3.0 1 1 1 2 2 2 0 Putative addiction module component DUF4665 PF15679.5 ORF3649 - 0.047 14.3 0.1 0.047 14.3 0.1 4.2 2 1 1 4 4 4 0 Domain of unknown function (DUF4665) LPP PF04728.13 ORF3649 - 0.97 9.9 6.6 11 6.5 0.3 3.7 3 1 0 3 3 3 0 Lipoprotein leucine-zipper SKA1 PF07160.12 ORF3649 - 2.2 8.1 17.7 1.1 9.1 4.1 2.8 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 XhlA PF10779.9 ORF3649 - 2.2 8.6 16.8 0.31 11.3 2.9 3.9 3 1 1 4 4 4 0 Haemolysin XhlA DUF4988 PF16378.5 ORF3649 - 3 7.5 11.3 4.3 7.0 0.1 3.3 3 0 0 3 3 3 0 Domain of unknown function DUF1664 PF07889.12 ORF3649 - 3.4 7.7 18.7 1.5 8.9 1.7 3.8 3 1 1 4 4 4 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF3649 - 4.8 6.4 23.4 1.3 8.3 5.0 3.2 2 1 2 4 4 4 0 Protein of unknown function (DUF3450) DUF4618 PF15397.6 ORF3649 - 7.5 5.9 25.5 0.53 9.7 9.1 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4618) DUF948 PF06103.11 ORF3649 - 8.1 6.8 11.8 3.1 8.1 0.5 4.1 4 1 0 4 4 4 0 Bacterial protein of unknown function (DUF948) Erythro-docking PF09277.11 ORF30777 - 0.11 12.4 1.4 0.3 11.0 1.4 1.7 1 0 0 1 1 1 0 Erythronolide synthase, docking Sugar_tr PF00083.24 ORF19754 - 0.00013 21.0 7.0 0.00013 21.0 7.0 2.0 2 0 0 2 2 2 1 Sugar (and other) transporter WD40 PF00400.32 ORF1601 - 9.7e-09 35.7 0.2 0.029 15.2 0.0 5.0 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF1601 - 0.0042 17.3 0.0 0.14 12.5 0.0 3.1 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF1601 - 0.019 14.7 0.1 0.032 14.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) FA_hydroxylase PF04116.13 ORF15756 - 2e-15 57.3 16.7 3.6e-15 56.5 16.7 1.4 1 0 0 1 1 1 1 Fatty acid hydroxylase superfamily Cyt-b5 PF00173.28 ORF15756 - 2.5e-13 50.0 0.0 6.1e-13 48.7 0.0 1.7 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain COX14 PF14880.6 ORF15756 - 0.015 15.1 2.2 0.015 15.1 2.2 2.3 2 1 1 3 3 3 0 Cytochrome oxidase c assembly MIP PF00230.20 ORF149388 - 1.3e-28 100.3 11.5 1.9e-28 99.8 11.5 1.2 1 0 0 1 1 1 1 Major intrinsic protein WD40 PF00400.32 ORF148376 - 9.7e-09 35.7 0.2 0.029 15.2 0.0 5.0 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF148376 - 0.0042 17.3 0.0 0.14 12.5 0.0 3.1 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF4303 PF14136.6 ORF148376 - 0.019 14.7 0.1 0.032 14.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4303) DUF488 PF04343.13 ORF146625 - 0.0013 19.3 4.9 0.034 14.7 0.3 3.3 2 1 0 2 2 2 1 Protein of unknown function, DUF488 GlnE PF03710.15 ORF146625 - 0.08 12.3 4.3 0.12 11.7 4.3 1.3 1 0 0 1 1 1 0 Glutamate-ammonia ligase adenylyltransferase NAD_binding_1 PF00175.21 ORF140353 - 3.3e-28 98.5 0.0 6.3e-28 97.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF140353 - 1.6e-25 89.3 0.1 3.3e-25 88.3 0.1 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF140353 - 7.3e-05 22.9 0.0 0.021 14.9 0.0 2.3 1 1 0 2 2 2 2 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF140353 - 0.068 13.6 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC EphA2_TM PF14575.6 ORF1395 - 2.9 8.8 5.9 2.5 9.0 0.0 3.3 2 1 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain SDA1 PF05285.12 ORF13480 - 0.00074 19.0 5.1 0.001 18.6 5.1 1.3 1 0 0 1 1 1 1 SDA1 SPX PF03105.19 ORF13480 - 0.0017 18.4 7.6 0.0018 18.3 7.6 1.2 1 0 0 1 1 1 1 SPX domain Presenilin PF01080.17 ORF13480 - 0.031 13.1 6.2 0.045 12.5 6.2 1.2 1 0 0 1 1 1 0 Presenilin Peptidase_S24 PF00717.23 ORF132399 - 1.5e-12 47.3 0.1 4.4e-12 45.8 0.1 1.9 1 0 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 ORF132399 - 4.8e-12 45.8 0.0 8.5e-12 45.0 0.0 1.4 1 0 0 1 1 1 1 Signal peptidase, peptidase S26 Nif11 PF07862.11 ORF132399 - 0.1 12.9 0.0 0.2 12.0 0.0 1.5 1 0 0 1 1 1 0 Nif11 domain UQ_con PF00179.26 ORF130966 - 2.7e-14 53.0 0.0 4.6e-14 52.3 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme SpoIISA_toxin PF14171.6 ORF123996 - 0.26 10.9 13.6 0.3 10.8 0.9 2.3 2 1 0 2 2 2 0 Toxin SpoIISA, type II toxin-antitoxin system MMPL PF03176.15 ORF123996 - 2.9 6.8 4.6 1.1 8.1 1.6 1.8 1 1 1 2 2 2 0 MMPL family DUF2203 PF09969.9 ORF123996 - 3.3 8.4 22.5 2.3 9.0 3.7 3.4 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) DUF4164 PF13747.6 ORF123996 - 4.6 7.6 22.2 5.3 7.4 2.2 4.3 3 2 0 3 3 3 0 Domain of unknown function (DUF4164) eRF1_3 PF03465.15 ORF123996 - 6.9 7.2 10.4 0.97 9.9 3.2 2.6 2 1 0 2 2 2 0 eRF1 domain 3 SMP PF04927.12 ORF118899 - 5.3 7.6 7.0 11 6.6 0.1 2.7 2 0 0 2 2 2 0 Seed maturation protein Mito_carr PF00153.27 ORF113325 - 1.5e-20 72.9 2.8 1.1e-05 25.3 0.1 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein PG_isomerase_N PF18353.1 ORF113325 - 0.094 13.1 0.0 0.53 10.7 0.0 2.0 2 0 0 2 2 2 0 Phosphoglucose isomerase N-terminal domain TMEM223 PF14640.6 ORF100340 - 0.046 13.9 0.0 0.18 11.9 0.0 2.0 2 0 0 2 2 2 0 Transmembrane protein 223 DUF5357 PF17310.2 ORF100340 - 0.12 10.8 0.6 0.2 10.2 0.6 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5357) DAGK_cat PF00781.24 ORF94950 - 2.9e-17 62.5 0.0 9.8e-17 60.8 0.0 1.8 1 1 0 1 1 1 1 Diacylglycerol kinase catalytic domain DAGK_acc PF00609.19 ORF94950 - 3.6e-09 37.2 0.0 6.9e-09 36.2 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain CcmH PF03918.14 ORF91258 - 3.3e-51 172.4 0.1 7.5e-51 171.2 0.0 1.6 1 1 0 1 1 1 1 Cytochrome C biogenesis protein TPR_2 PF07719.17 ORF91258 - 6.6e-08 32.1 0.1 0.28 11.4 0.0 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF91258 - 4.1e-05 24.1 4.0 0.018 15.8 0.1 3.7 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF91258 - 0.00027 21.4 5.7 0.028 14.9 0.4 4.5 2 2 2 4 4 4 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF91258 - 0.014 15.5 1.9 0.88 9.8 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF91258 - 0.027 14.7 0.0 0.52 10.6 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF91258 - 0.03 14.7 0.2 1.3 9.5 0.2 3.3 4 0 0 4 4 3 0 Tetratricopeptide repeat Fis1_TPR_N PF14852.6 ORF91258 - 0.068 12.9 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 Fis1 N-terminal tetratricopeptide repeat TPR_16 PF13432.6 ORF91258 - 0.077 13.7 0.8 0.077 13.7 0.8 3.4 2 2 1 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF91258 - 0.079 12.8 0.0 46 4.1 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat UPF0014 PF03649.13 ORF91258 - 0.092 12.1 1.2 0.21 10.9 0.3 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0014) Ricin_B_lectin PF00652.22 ORF91197 - 4.3e-09 36.7 0.1 7.8e-09 35.9 0.1 1.3 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain Glyco_transf_7C PF02709.14 ORF91197 - 0.019 14.6 0.4 0.036 13.7 0.4 1.4 1 0 0 1 1 1 0 N-terminal domain of galactosyltransferase RicinB_lectin_2 PF14200.6 ORF91197 - 0.044 14.5 0.0 0.11 13.2 0.0 1.6 1 0 0 1 1 1 0 Ricin-type beta-trefoil lectin domain-like DUF1152 PF06626.12 ORF90651 - 0.022 14.0 1.3 0.034 13.4 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1152) Polysacc_synt PF01943.17 ORF90624 - 0.001 18.5 1.0 0.001 18.5 1.0 1.4 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein TIR_2 PF13676.6 ORF90624 - 0.0054 17.3 0.0 0.011 16.4 0.0 1.4 1 0 0 1 1 1 1 TIR domain Zip PF02535.22 ORF90559 - 5e-29 101.6 15.4 1e-23 84.2 6.4 2.8 1 1 2 3 3 3 2 ZIP Zinc transporter EFG_IV PF03764.18 ORF87813 - 2e-39 134.1 0.0 3.1e-39 133.5 0.0 1.3 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 ORF87813 - 6.6e-33 112.6 0.0 1.1e-32 111.9 0.0 1.4 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 ORF87813 - 7.8e-29 99.6 0.1 2.6e-28 97.9 0.1 2.0 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF87813 - 1.1e-08 35.4 0.0 1.9e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 ORF87813 - 1.4e-06 28.2 0.0 2.7e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain TRAM_LAG1_CLN8 PF03798.16 ORF87221 - 4.2e-25 88.7 19.8 4.2e-25 88.7 19.8 2.1 2 0 0 2 2 2 1 TLC domain MFS_1 PF07690.16 ORF86580 - 3e-19 69.1 8.4 3e-19 69.1 8.4 1.6 1 1 1 2 2 2 1 Major Facilitator Superfamily MLANA PF14991.6 ORF86580 - 0.15 12.4 0.5 3.7 7.9 0.2 2.6 2 0 0 2 2 2 0 Protein melan-A DUF3333 PF11812.8 ORF86580 - 1.1 9.4 0.0 1.1 9.4 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF3333) Peptidase_S28 PF05577.12 ORF79338 - 8.6e-62 209.3 3.9 1.3e-61 208.7 3.9 1.3 1 1 0 1 1 1 1 Serine carboxypeptidase S28 Aldo_ket_red PF00248.21 ORF79185 - 1.5e-36 126.2 0.1 4.1e-36 124.7 0.1 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family TRAM_LAG1_CLN8 PF03798.16 ORF72573 - 2.4e-20 73.1 22.7 2.4e-20 73.1 22.7 1.9 2 0 0 2 2 2 1 TLC domain 7tm_1 PF00001.21 ORF71200 - 0.072 12.4 0.4 0.11 11.8 0.4 1.3 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) TRAP-gamma PF07074.12 ORF71200 - 0.085 12.4 2.7 6.2 6.4 0.1 2.4 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Glycophorin_A PF01102.18 ORF71200 - 0.1 12.8 0.3 0.22 11.8 0.3 1.5 1 0 0 1 1 1 0 Glycophorin A DAHP_synth_1 PF00793.20 ORF70120 - 5.8e-113 376.3 0.0 6.8e-113 376.1 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family TFIIS_M PF07500.14 ORF65502 - 1.5e-17 64.1 1.6 1.5e-17 64.1 1.6 2.9 3 1 0 3 3 3 1 Transcription factor S-II (TFIIS), central domain TFIIS_C PF01096.18 ORF65502 - 3.3e-16 58.8 4.6 5.4e-16 58.2 4.6 1.4 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS) Med26 PF08711.11 ORF65502 - 2.5e-06 27.4 3.5 5.3e-06 26.4 3.5 1.6 1 0 0 1 1 1 1 TFIIS helical bundle-like domain DUF4428 PF14471.6 ORF65502 - 0.0052 16.7 0.3 0.019 14.9 0.3 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) Menin PF05053.13 ORF65502 - 0.031 12.6 8.3 0.047 12.1 8.3 1.2 1 0 0 1 1 1 0 Menin Baculo_LEF5_C PF11792.8 ORF65502 - 0.058 13.1 0.6 0.11 12.1 0.6 1.5 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 C-terminal domain G-gamma PF00631.22 ORF65502 - 0.059 13.4 1.0 0.17 11.9 0.1 2.2 2 0 0 2 2 2 0 GGL domain Lar_restr_allev PF14354.6 ORF65502 - 0.53 10.7 3.5 0.32 11.4 1.2 1.9 2 0 0 2 2 2 0 Restriction alleviation protein Lar SOBP PF15279.6 ORF65502 - 0.78 10.3 7.8 0.96 10.0 7.8 1.3 1 0 0 1 1 1 0 Sine oculis-binding protein zf-DNL PF05180.12 ORF65502 - 1 9.3 4.8 0.69 9.9 2.1 2.0 2 0 0 2 2 2 0 DNL zinc finger WD40 PF00400.32 ORF649 - 4.9e-46 153.8 15.3 1.4e-07 32.0 0.1 7.2 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF649 - 2.6e-15 56.5 3.5 0.0013 19.0 0.1 5.2 2 1 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF649 - 6.2e-05 22.5 0.0 0.19 11.0 0.0 2.9 2 1 0 3 3 3 2 WD40-like domain eIF2A PF08662.11 ORF649 - 8.7e-05 22.5 3.3 0.023 14.6 0.5 3.0 2 1 1 3 3 3 2 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 ORF649 - 0.00012 21.1 0.1 1.2 8.0 0.0 3.6 2 1 2 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Cytochrom_D1 PF02239.16 ORF649 - 0.0017 16.9 0.2 0.68 8.4 0.0 2.8 2 1 0 3 3 3 2 Cytochrome D1 heme domain Frtz PF11768.8 ORF649 - 0.046 12.0 0.0 0.14 10.4 0.0 1.8 2 1 0 2 2 2 0 WD repeat-containing and planar cell polarity effector protein Fritz 7tm_1 PF00001.21 ORF63906 - 0.072 12.4 0.4 0.11 11.8 0.4 1.3 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) TRAP-gamma PF07074.12 ORF63906 - 0.085 12.4 2.7 6.2 6.4 0.1 2.4 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Glycophorin_A PF01102.18 ORF63906 - 0.1 12.8 0.3 0.22 11.8 0.3 1.5 1 0 0 1 1 1 0 Glycophorin A RRM_1 PF00076.22 ORF56997 - 8.4e-12 44.7 0.0 1.4e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF56997 - 1.1e-09 37.9 16.3 1.3e-05 25.0 3.3 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF56997 - 1.3e-07 31.2 17.4 0.00022 20.9 2.6 2.6 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF56997 - 5e-05 23.2 12.7 0.0009 19.2 0.3 3.0 3 0 0 3 3 3 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF56997 - 0.003 17.3 6.8 0.22 11.3 1.3 2.4 2 0 0 2 2 2 2 Zinc knuckle OB_RNB PF08206.11 ORF56997 - 0.0081 15.8 0.1 0.081 12.6 0.1 2.9 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_2 PF13696.6 ORF56997 - 0.026 14.3 11.7 0.34 10.8 2.1 2.3 2 0 0 2 2 2 0 Zinc knuckle PseudoU_synth_2 PF00849.22 ORF47064 - 2.8e-21 76.3 0.0 3.8e-21 75.8 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase DNA_pol3_delta2 PF13177.6 ORF43219 - 4.2e-11 42.9 6.6 7.4e-11 42.1 0.3 2.2 2 0 0 2 2 2 1 DNA polymerase III, delta subunit Sigma54_activ_2 PF14532.6 ORF43219 - 1.7e-05 25.0 0.2 0.0059 16.7 0.0 2.8 2 1 1 3 3 3 1 Sigma-54 interaction domain DNA_pol3_delta PF06144.13 ORF43219 - 1.8e-05 24.6 0.2 1.8e-05 24.6 0.2 1.9 2 0 0 2 2 2 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 ORF43219 - 0.001 19.5 0.8 0.001 19.5 0.8 1.9 2 0 0 2 2 2 1 Replication factor C C-terminal domain AAA_23 PF13476.6 ORF43219 - 0.0026 18.3 0.1 0.0036 17.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain DUF5460 PF17544.2 ORF43219 - 0.0029 16.7 0.9 0.0048 16.0 0.9 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5460) Glutaminase PF04960.15 ORF43219 - 0.0029 16.8 1.6 0.61 9.2 0.3 2.3 1 1 1 2 2 2 2 Glutaminase AAA_5 PF07728.14 ORF43219 - 0.0037 17.3 0.0 0.012 15.7 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF43219 - 0.01 15.6 0.0 0.54 10.0 0.0 2.5 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 ORF43219 - 0.017 15.6 0.8 0.061 13.8 0.2 2.3 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_assoc_2 PF16193.5 ORF43219 - 0.062 13.6 0.6 0.2 12.0 0.0 2.2 3 0 0 3 3 3 0 AAA C-terminal domain Spo7 PF03907.13 ORF39794 - 0.44 10.0 0.0 0.44 10.0 0.0 2.9 2 1 0 3 3 3 0 Spo7-like protein Cyt_bd_oxida_II PF02322.15 ORF39794 - 1.6 8.0 16.7 0.16 11.3 11.7 1.7 1 1 1 2 2 2 0 Cytochrome bd terminal oxidase subunit II Asp PF00026.23 ORF36397 - 3.3e-16 59.6 0.0 5.2e-16 59.0 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF36397 - 1.4e-15 57.4 0.0 2.1e-15 56.9 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal TRAM_LAG1_CLN8 PF03798.16 ORF34672 - 2.4e-20 73.1 22.7 2.4e-20 73.1 22.7 1.9 2 0 0 2 2 2 1 TLC domain P_C10 PF14974.6 ORF29814 - 0.021 14.9 0.0 0.035 14.2 0.0 1.4 1 0 0 1 1 1 0 Protein C10 DUF4570 PF15134.6 ORF25679 - 0.0039 17.2 8.4 0.0039 17.2 8.4 2.2 2 1 1 3 3 3 1 Domain of unknown function (DUF4570) DUF3552 PF12072.8 ORF25679 - 0.015 14.7 17.8 0.015 14.7 17.8 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) MS_channel PF00924.18 ORF25679 - 0.13 11.8 0.2 0.25 10.9 0.0 1.6 2 0 0 2 2 2 0 Mechanosensitive ion channel UPF0242 PF06785.11 ORF25679 - 2 8.5 24.2 0.3 11.2 9.4 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus AAA_23 PF13476.6 ORF25679 - 2.5 8.5 16.1 0.31 11.5 5.6 2.2 2 0 0 2 2 2 0 AAA domain Effector_1 PF04518.12 ORF25332 - 0.08 12.0 0.6 0.11 11.6 0.0 1.5 2 0 0 2 2 2 0 Effector from type III secretion system DNA_pol_phi PF04931.13 ORF25332 - 3.5 5.6 11.5 0.065 11.3 2.0 2.0 2 0 0 2 2 2 0 DNA polymerase phi UbiA PF01040.18 ORF19714 - 4e-33 114.8 6.9 5.3e-33 114.4 6.9 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family TRAM_LAG1_CLN8 PF03798.16 ORF19493 - 2.4e-20 73.1 22.7 2.4e-20 73.1 22.7 1.9 2 0 0 2 2 2 1 TLC domain OAD_gamma PF04277.13 ORF18981 - 0.0073 16.9 0.1 0.017 15.7 0.1 1.7 1 1 0 1 1 1 1 Oxaloacetate decarboxylase, gamma chain CD99L2 PF12301.8 ORF18981 - 0.02 15.2 0.8 0.02 15.2 0.8 2.0 1 1 1 2 2 2 0 CD99 antigen like protein 2 DUF4834 PF16118.5 ORF18981 - 0.021 15.8 0.3 0.077 14.0 0.3 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) Sipho_Gp157 PF05565.11 ORF15573 - 0.0098 15.9 0.3 0.063 13.3 0.0 2.4 2 1 0 2 2 2 1 Siphovirus Gp157 Flavodoxin_1 PF00258.25 ORF15573 - 0.022 15.0 1.6 0.038 14.2 0.2 2.1 2 1 0 2 2 2 0 Flavodoxin Fib_alpha PF08702.10 ORF15573 - 0.026 14.7 8.1 0.074 13.2 0.2 3.6 3 1 1 4 4 4 0 Fibrinogen alpha/beta chain family GCP_N_terminal PF17681.1 ORF15573 - 0.044 13.4 2.5 0.072 12.7 2.5 1.4 1 0 0 1 1 1 0 Gamma tubulin complex component N-terminal zf-C4pol PF14260.6 ORF15573 - 0.08 13.4 0.3 3.8 8.0 0.0 3.2 2 0 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta PDZ_1 PF12812.7 ORF15573 - 0.11 12.5 0.0 0.3 11.2 0.0 1.7 1 0 0 1 1 1 0 PDZ-like domain Matrilin_ccoil PF10393.9 ORF15573 - 0.17 11.8 10.9 1.4 8.8 0.4 4.2 4 1 1 5 5 5 0 Trimeric coiled-coil oligomerisation domain of matrilin CREPT PF16566.5 ORF15573 - 2 8.6 13.4 0.16 12.2 0.7 3.5 1 1 1 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour Exonuc_VII_L PF02601.15 ORF15573 - 3.8 7.0 18.7 8e+03 -3.9 18.7 2.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF16 PF01519.16 ORF15573 - 5.5 7.5 13.1 18 5.9 0.8 4.0 3 1 1 4 4 4 0 Protein of unknown function DUF16 RRM_1 PF00076.22 ORF151058 - 8.4e-12 44.7 0.0 1.4e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF151058 - 1.1e-09 37.9 16.3 1.3e-05 25.0 3.3 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF151058 - 1.3e-07 31.2 17.4 0.00022 20.9 2.6 2.6 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF151058 - 5e-05 23.2 12.7 0.0009 19.2 0.3 3.0 3 0 0 3 3 3 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF151058 - 0.003 17.3 6.8 0.22 11.3 1.3 2.4 2 0 0 2 2 2 2 Zinc knuckle OB_RNB PF08206.11 ORF151058 - 0.0081 15.8 0.1 0.081 12.6 0.1 2.9 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_2 PF13696.6 ORF151058 - 0.026 14.3 11.7 0.34 10.8 2.1 2.3 2 0 0 2 2 2 0 Zinc knuckle DnaJ PF00226.31 ORF15102 - 1.6e-18 66.5 0.3 9e-18 64.2 0.1 2.2 2 0 0 2 2 2 1 DnaJ domain SAP PF02037.27 ORF15102 - 1.1e-07 31.4 4.8 0.00089 19.0 0.0 4.8 3 2 0 3 3 3 3 SAP domain Armet PF10208.9 ORF15102 - 0.11 12.4 0.1 22 5.0 0.0 2.7 2 1 0 2 2 2 0 Degradation arginine-rich protein for mis-folding 7tm_1 PF00001.21 ORF141812 - 0.066 12.5 0.4 0.11 11.8 0.4 1.4 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) TRAP-gamma PF07074.12 ORF141812 - 0.085 12.4 2.7 6.2 6.4 0.1 2.4 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Glycophorin_A PF01102.18 ORF141812 - 0.11 12.8 0.3 0.22 11.8 0.3 1.5 1 0 0 1 1 1 0 Glycophorin A 7tm_1 PF00001.21 ORF139240 - 0.071 12.4 0.4 0.11 11.8 0.4 1.3 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) TRAP-gamma PF07074.12 ORF139240 - 0.076 12.6 2.7 6.2 6.4 0.1 2.5 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Glycophorin_A PF01102.18 ORF139240 - 0.11 12.8 0.3 0.22 11.8 0.3 1.5 1 0 0 1 1 1 0 Glycophorin A DUF3139 PF11337.8 ORF139240 - 0.32 11.7 4.6 1.5 9.5 0.0 3.1 3 1 0 3 3 3 0 Protein of unknown function (DUF3139) 7tm_1 PF00001.21 ORF138514 - 0.072 12.4 0.4 0.11 11.8 0.4 1.3 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) TRAP-gamma PF07074.12 ORF138514 - 0.085 12.4 2.7 6.2 6.4 0.1 2.4 2 0 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) Glycophorin_A PF01102.18 ORF138514 - 0.1 12.8 0.3 0.22 11.8 0.3 1.5 1 0 0 1 1 1 0 Glycophorin A Ank_2 PF12796.7 ORF13552 - 9e-17 61.4 0.0 8.2e-10 39.1 0.0 2.7 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF13552 - 9.9e-14 51.2 1.5 5.7e-06 26.5 0.1 3.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF13552 - 1.8e-12 46.3 0.1 0.0012 19.1 0.0 4.4 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF13552 - 7.1e-10 38.9 3.9 0.0028 18.0 0.2 4.9 5 0 0 5 5 5 2 Ankyrin repeat Ank_4 PF13637.6 ORF13552 - 2e-08 34.6 0.2 0.0038 17.8 0.1 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) 3Beta_HSD PF01073.19 ORF13528 - 3.5e-26 91.8 0.0 4.7e-26 91.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF13528 - 1.8e-21 76.7 0.0 2.4e-21 76.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF13528 - 8e-12 45.4 0.0 1.2e-11 44.9 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 ORF13528 - 1.9e-08 33.8 0.0 3.3e-08 33.0 0.0 1.5 1 0 0 1 1 1 1 Male sterility protein GDP_Man_Dehyd PF16363.5 ORF13528 - 4.1e-08 33.0 0.0 6.2e-08 32.4 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 ORF13528 - 8.6e-08 31.6 0.0 1.5e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF13528 - 1.3e-06 28.5 0.0 3e-06 27.2 0.0 1.5 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF13528 - 0.0002 21.6 0.0 0.00044 20.5 0.0 1.7 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NmrA PF05368.13 ORF13528 - 0.00052 19.6 0.0 0.0013 18.4 0.0 1.6 1 1 0 1 1 1 1 NmrA-like family TRP_N PF14558.6 ORF13528 - 0.037 14.4 0.0 0.072 13.5 0.0 1.5 1 0 0 1 1 1 0 ML-like domain TRAM_LAG1_CLN8 PF03798.16 ORF130160 - 4.2e-25 88.7 19.8 4.2e-25 88.7 19.8 2.1 2 0 0 2 2 2 1 TLC domain Pkinase PF00069.25 ORF115511 - 8.6e-45 153.1 1.3 1.2e-44 152.7 1.3 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF115511 - 1e-25 90.5 0.3 1.4e-25 90.1 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF115511 - 6.1e-10 38.8 0.0 9.1e-10 38.2 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF115511 - 9.9e-08 32.2 0.0 0.0001 22.3 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF115511 - 1.6e-07 31.1 0.8 2.8e-07 30.3 0.8 1.4 1 0 0 1 1 1 1 RIO1 family Haspin_kinase PF12330.8 ORF115511 - 6.8e-07 28.6 2.1 9e-07 28.2 2.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF115511 - 2e-05 24.1 0.0 4.5e-05 22.9 0.0 1.6 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF115511 - 3.3e-05 22.8 0.1 5.4e-05 22.2 0.1 1.2 1 0 0 1 1 1 1 Fungal protein kinase WaaY PF06176.11 ORF115511 - 0.0019 17.9 0.4 0.0032 17.1 0.4 1.3 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) PIP49_C PF12260.8 ORF115511 - 0.013 15.1 0.2 0.021 14.5 0.2 1.4 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 FTA2 PF13095.6 ORF115511 - 0.056 13.1 0.4 0.11 12.1 0.1 1.6 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 RRM_1 PF00076.22 ORF112714 - 8.4e-12 44.7 0.0 1.4e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF112714 - 1.1e-09 37.9 16.3 1.3e-05 25.0 3.3 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF112714 - 1.3e-07 31.2 17.4 0.00022 20.9 2.6 2.6 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF112714 - 5.3e-05 23.1 12.7 0.0009 19.2 0.3 3.0 3 0 0 3 3 3 2 Zinc knuckle zf-CCHC_4 PF14392.6 ORF112714 - 0.0029 17.3 6.8 0.22 11.3 1.3 2.4 2 0 0 2 2 2 2 Zinc knuckle OB_RNB PF08206.11 ORF112714 - 0.0081 15.8 0.1 0.081 12.6 0.1 2.9 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_2 PF13696.6 ORF112714 - 0.026 14.3 11.7 0.34 10.8 2.1 2.3 2 0 0 2 2 2 0 Zinc knuckle NUDIX_4 PF14815.6 ORF111911 - 6.7e-25 87.2 0.1 1.2e-24 86.4 0.1 1.5 1 0 0 1 1 1 1 NUDIX domain HhH-GPD PF00730.25 ORF111911 - 1.3e-23 83.5 0.0 2e-23 82.9 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 ORF111911 - 2.5e-08 33.3 0.0 5.1e-08 32.4 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 ORF111911 - 0.00014 22.0 4.2 0.00026 21.2 4.2 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_8 PF14716.6 ORF111911 - 0.1 13.0 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix domain HHH_5 PF14520.6 ORF111911 - 0.18 12.5 0.0 0.71 10.5 0.0 2.0 2 0 0 2 2 2 0 Helix-hairpin-helix domain TRAM_LAG1_CLN8 PF03798.16 ORF110835 - 6.5e-23 81.5 22.8 6.5e-23 81.5 22.8 1.9 2 0 0 2 2 2 1 TLC domain zf-LITAF-like PF10601.9 ORF110835 - 4.9 7.5 5.8 2.5 8.4 0.1 3.0 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain NicO PF03824.16 ORF110271 - 0.05 12.9 2.3 0.35 10.2 0.2 2.3 2 0 0 2 2 2 0 High-affinity nickel-transport protein SSPI PF14098.6 ORF110271 - 0.055 13.6 0.0 0.22 11.7 0.0 2.0 2 0 0 2 2 2 0 Small, acid-soluble spore protein I DNA_meth_N PF18284.1 ORF103185 - 0.22 11.5 0.8 15 5.5 0.1 2.6 2 0 0 2 2 2 0 DNA methylase N-terminal domain LXG PF04740.12 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.00078 19.2 12.0 0.00078 19.2 12.0 2.3 2 0 0 2 2 2 1 LXG domain of WXG superfamily Baculo_PEP_C PF04513.12 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.0076 16.3 0.1 0.019 15.0 0.1 1.6 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus NPV_P10 PF05531.12 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.19 12.2 3.5 1.2 9.7 2.5 2.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Pullulanase_Ins PF18494.1 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.24 11.9 3.2 0.27 11.7 0.4 2.5 3 0 0 3 3 3 0 Pullulanase Ins domain DUF4140 PF13600.6 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 0.52 10.8 6.0 0.81 10.2 0.1 3.0 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) DUF1664 PF07889.12 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 1.1 9.4 12.2 2 8.5 4.4 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Nup54 PF13874.6 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 4.5 7.4 9.1 2.6 8.1 6.9 1.7 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 HIP1_clath_bdg PF16515.5 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 5.7 7.6 12.0 3.1 8.5 3.4 2.7 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TMF_TATA_bd PF12325.8 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_1 - 9.2 6.5 18.4 0.43 10.8 4.1 3.0 2 1 1 3 3 3 0 TATA element modulatory factor 1 TATA binding SUR7 PF06687.12 NODE_17922_length_1045_cov_1613.268317_g13660_i0reverse_frame_1 - 0.0085 15.7 0.2 0.048 13.3 0.0 2.0 2 0 0 2 2 2 1 SUR7/PalI family Glyco_transf_90 PF05686.12 ORF86409 - 7.7e-06 25.1 1.8 7.8e-05 21.8 1.8 2.3 1 1 0 1 1 1 1 Glycosyl transferase family 90 Methyltransf_21 PF05050.12 ORF74178 - 5e-10 39.7 0.0 1.5e-09 38.1 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase FkbM domain PCMT PF01135.19 ORF74178 - 0.0015 18.3 0.0 0.0025 17.6 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) V_cholerae_RfbT PF05575.11 ORF74178 - 0.0055 16.0 0.0 0.045 13.0 0.0 2.0 2 0 0 2 2 2 1 Vibrio cholerae RfbT protein Met_10 PF02475.16 ORF74178 - 0.12 12.1 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein PABP PF00658.18 ORF71823 - 9.5e-09 35.3 0.0 1.5e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain TFIIA PF03153.13 ORF71823 - 2.6 8.0 13.3 3.1 7.7 13.3 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit FMO-like PF00743.19 ORF67988 - 1.5e-24 86.4 0.0 8.5e-24 83.9 0.0 1.8 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF67988 - 4e-08 32.9 0.0 1e-06 28.2 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF67988 - 4.8e-07 29.3 0.0 0.0031 16.8 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF67988 - 7.4e-05 22.0 0.2 0.00014 21.1 0.0 1.4 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 ORF67988 - 0.0032 18.0 0.2 0.0086 16.6 0.1 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 ORF67988 - 0.0046 16.4 0.2 0.0072 15.7 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF67988 - 0.021 13.9 0.0 0.12 11.5 0.0 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A NAD_binding_7 PF13241.6 ORF67988 - 0.023 15.1 0.0 0.04 14.4 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding MORN PF02493.20 ORF65439 - 8.5e-30 100.9 50.5 2.8e-06 26.9 3.4 7.6 8 0 0 8 8 8 6 MORN repeat ID PF18543.1 ORF65439 - 0.12 12.4 1.0 6.9 6.8 0.3 3.1 3 1 1 4 4 4 0 Intracellular delivery domain MORN PF02493.20 ORF65438 - 3.7e-16 58.0 7.2 6.9e-08 31.9 0.9 4.0 3 0 0 3 3 3 3 MORN repeat Vps23_core PF09454.10 ORF6229 - 4.5e-15 55.3 0.4 1e-14 54.2 0.4 1.6 1 0 0 1 1 1 1 Vps23 core domain UEV PF05743.13 ORF6229 - 8.4e-09 35.3 0.2 1.4e-08 34.6 0.2 1.4 1 0 0 1 1 1 1 UEV domain Peptidase_S46 PF10459.9 ORF6229 - 0.027 13.1 2.6 0.071 11.7 2.6 1.5 1 1 0 1 1 1 0 Peptidase S46 DASH_Dad2 PF08654.10 ORF6229 - 0.046 14.1 1.2 0.8 10.2 0.5 2.7 2 1 1 3 3 3 0 DASH complex subunit Dad2 HAUS2 PF15003.6 ORF6229 - 0.13 12.0 3.9 4.3 7.0 0.3 2.3 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 2 UPF0242 PF06785.11 ORF6229 - 1.6 8.8 8.8 0.58 10.2 5.9 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Nucleoside_tran PF01733.18 ORF61826 - 8.6e-55 186.3 16.6 1.1e-54 186.0 16.6 1.0 1 0 0 1 1 1 1 Nucleoside transporter DUF2976 PF11190.8 ORF61826 - 0.18 11.6 2.2 1.4 8.8 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2976) EMC3_TMCO1 PF01956.16 ORF61826 - 0.44 10.3 12.4 0.53 10.0 2.0 2.4 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Wzz PF02706.15 ORF61826 - 0.56 10.6 2.6 1.9 8.9 0.3 2.7 2 0 0 2 2 2 0 Chain length determinant protein DnaJ_C PF01556.18 ORF54986 - 4.9e-27 94.8 0.2 7.6e-27 94.2 0.2 1.3 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 ORF54986 - 1.3e-20 73.2 0.4 2.4e-20 72.4 0.4 1.4 1 0 0 1 1 1 1 DnaJ domain PHR PF08005.12 ORF49140 - 6.6e-20 72.3 2.4 1.5e-19 71.1 0.3 2.0 2 0 0 2 2 2 1 PHR domain Corona_NS2 PF04753.12 ORF47781 - 0.1 13.2 0.0 0.18 12.4 0.0 1.3 1 0 0 1 1 1 0 Coronavirus non-structural protein NS2 Presenilin PF01080.17 ORF47781 - 3.1 6.5 4.9 4 6.1 4.9 1.1 1 0 0 1 1 1 0 Presenilin Peptidase_M42 PF05343.14 ORF47257 - 2.8e-84 282.6 0.0 4.2e-84 282.0 0.0 1.3 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M28 PF04389.17 ORF47257 - 6.6e-05 22.7 0.0 0.047 13.4 0.0 2.3 2 0 0 2 2 2 2 Peptidase family M28 Peptidase_M18 PF02127.15 ORF47257 - 0.00013 20.9 0.1 0.00037 19.4 0.1 1.6 1 1 1 2 2 2 1 Aminopeptidase I zinc metalloprotease (M18) 3Beta_HSD PF01073.19 ORF46234 - 5.8e-23 81.3 0.0 9.9e-23 80.5 0.0 1.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF46234 - 1.3e-20 73.9 0.0 3.1e-20 72.7 0.0 1.6 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF46234 - 1e-14 54.8 0.0 1.5e-14 54.3 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 ORF46234 - 7.1e-13 48.3 0.0 1.3e-12 47.5 0.0 1.4 1 1 0 1 1 1 1 Male sterility protein GDP_Man_Dehyd PF16363.5 ORF46234 - 2.3e-10 40.4 0.0 3.7e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase KR PF08659.10 ORF46234 - 1.1e-09 38.4 0.0 2.4e-09 37.3 0.0 1.5 1 1 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF46234 - 1.5e-08 34.2 0.0 2.3e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NmrA PF05368.13 ORF46234 - 8.5e-06 25.5 0.0 2.2e-05 24.1 0.0 1.6 1 1 0 1 1 1 1 NmrA-like family Sacchrp_dh_NADP PF03435.18 ORF46234 - 0.00025 21.3 0.1 0.0015 18.8 0.1 2.3 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain RmlD_sub_bind PF04321.17 ORF46234 - 0.0018 17.5 0.0 0.0029 16.8 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain N6-adenineMlase PF10237.9 ORF46234 - 0.04 13.7 0.0 0.081 12.7 0.0 1.6 1 1 0 1 1 1 0 Probable N6-adenine methyltransferase COX15-CtaA PF02628.15 ORF32953 - 6.4e-94 314.7 7.7 7.2e-94 314.5 7.7 1.0 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein FAM184 PF15665.5 ORF32896 - 0.0018 18.1 50.8 0.015 15.1 14.4 3.3 1 1 2 3 3 3 3 Family with sequence similarity 184, A and B DUF1040 PF06288.13 ORF32896 - 0.0023 18.3 1.5 0.0074 16.7 1.5 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF1040) T7SS_ESX_EspC PF10824.8 ORF32896 - 3.9 8.0 19.2 1.1 9.8 14.4 2.5 3 0 0 3 3 3 0 Excreted virulence factor EspC, type VII ESX diderm CstA_5TM PF13722.6 ORF29244 - 3.6e-36 124.1 7.8 3.6e-36 124.1 7.8 2.0 2 0 0 2 2 2 1 5TM C-terminal transporter carbon starvation CstA CstA PF02554.14 ORF29244 - 1.4e-14 53.8 0.6 1.4e-14 53.8 0.6 2.4 3 1 0 3 3 3 1 Carbon starvation protein CstA Rad51 PF08423.11 ORF28800 - 3.8e-23 82.1 1.9 3e-22 79.1 1.9 2.0 1 1 0 1 1 1 1 Rad51 AAA_25 PF13481.6 ORF28800 - 6.9e-05 22.5 0.0 0.00012 21.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain B2 PF11473.8 ORF28800 - 0.07 12.9 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 RNA binding protein B2 PAPS_reduct PF01507.19 ORF28800 - 0.27 11.3 2.6 1.5 8.9 0.2 2.5 3 0 0 3 3 3 0 Phosphoadenosine phosphosulfate reductase family HATPase_c PF02518.26 ORF26685 - 7.4e-18 65.1 0.0 1.5e-17 64.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF26685 - 5.5e-14 51.9 0.7 2.5e-13 49.9 0.1 2.5 2 1 1 3 3 3 1 His Kinase A (phospho-acceptor) domain PAS PF00989.25 ORF26685 - 9.3e-08 32.1 0.0 3.1e-07 30.4 0.0 1.8 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 ORF26685 - 7.5e-05 22.9 0.0 0.00016 21.9 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 ORF26685 - 8.8e-05 22.7 0.0 0.00019 21.6 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.7 ORF26685 - 0.00019 21.4 0.1 0.0011 18.9 0.0 2.2 2 0 0 2 2 2 1 PAS domain DUF1688 PF07958.11 ORF26685 - 0.037 12.8 0.1 0.047 12.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1688) HATPase_c_3 PF13589.6 ORF26685 - 0.1 12.4 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FMO-like PF00743.19 ORF21526 - 4.1e-25 88.2 0.0 2.3e-24 85.7 0.0 1.8 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF21526 - 3.9e-08 32.9 0.0 1e-06 28.2 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF21526 - 5.7e-07 29.1 0.0 0.0031 16.8 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF21526 - 7.4e-05 22.0 0.2 0.00014 21.1 0.0 1.4 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 ORF21526 - 0.0032 18.0 0.2 0.0086 16.6 0.1 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 ORF21526 - 0.0045 16.4 0.2 0.0072 15.7 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF21526 - 0.021 13.9 0.0 0.12 11.5 0.0 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A NAD_binding_7 PF13241.6 ORF21526 - 0.023 15.1 0.0 0.04 14.4 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding COQ9 PF08511.11 ORF152816 - 0.081 12.7 1.8 12 5.8 0.0 3.2 3 0 0 3 3 3 0 COQ9 FAM220 PF15487.6 ORF152816 - 2 8.0 9.7 4 7.0 9.7 1.6 1 0 0 1 1 1 0 FAM220 family Glyco_transf_22 PF03901.17 ORF14800 - 7.4e-33 114.4 14.9 9.7e-33 114.0 14.9 1.1 1 0 0 1 1 1 1 Alg9-like mannosyltransferase family Phasin PF05597.11 ORF140863 - 0.029 14.3 1.2 0.029 14.3 1.2 2.6 2 1 1 3 3 3 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Ribosomal_L9_C PF03948.14 ORF140863 - 0.037 14.5 2.2 0.091 13.2 0.8 2.4 2 0 0 2 2 2 0 Ribosomal protein L9, C-terminal domain OmpH PF03938.14 ORF140863 - 7.6 6.9 18.2 0.52 10.6 3.7 3.0 2 2 1 3 3 3 0 Outer membrane protein (OmpH-like) PP2C PF00481.21 ORF131993 - 1.7e-68 231.1 1.0 7.9e-64 215.8 0.2 2.1 1 1 1 2 2 2 2 Protein phosphatase 2C PP2C_2 PF13672.6 ORF131993 - 0.0006 19.5 0.0 0.0017 18.0 0.0 1.6 2 1 0 2 2 2 1 Protein phosphatase 2C Kp4 PF09044.10 ORF131993 - 0.49 10.5 2.8 0.91 9.6 0.0 2.6 3 1 1 4 4 4 0 Kp4 Vps23_core PF09454.10 ORF131889 - 4.5e-15 55.3 0.4 1e-14 54.2 0.4 1.6 1 0 0 1 1 1 1 Vps23 core domain UEV PF05743.13 ORF131889 - 8.4e-09 35.3 0.2 1.4e-08 34.6 0.2 1.4 1 0 0 1 1 1 1 UEV domain Peptidase_S46 PF10459.9 ORF131889 - 0.011 14.5 2.6 0.019 13.7 2.6 1.3 1 1 0 1 1 1 0 Peptidase S46 CHASE3 PF05227.13 ORF131889 - 0.26 11.2 3.1 2.5 8.0 0.4 2.9 3 0 0 3 3 3 0 CHASE3 domain Mod_r PF07200.13 ORF131889 - 1.4 9.0 12.4 0.34 11.0 0.8 2.5 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein UPF0242 PF06785.11 ORF131889 - 4.1 7.5 11.6 0.46 10.6 5.4 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus MORN PF02493.20 ORF130157 - 1.7e-46 153.4 64.2 4.5e-07 29.4 0.8 10.5 10 1 0 10 10 10 9 MORN repeat Tudor_2 PF18104.1 ORF130157 - 0.33 10.7 12.9 3.2 7.5 0.2 5.3 5 0 0 5 5 5 0 Jumonji domain-containing protein 2A Tudor domain 3Beta_HSD PF01073.19 ORF116077 - 1.2e-28 100.0 0.0 1.5e-28 99.6 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF116077 - 4.7e-23 81.9 0.0 6e-23 81.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF116077 - 3.9e-12 46.4 0.0 5.8e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF116077 - 4e-11 42.9 0.0 5.9e-11 42.3 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF116077 - 4.6e-09 35.8 0.0 1.2e-08 34.5 0.0 1.6 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF116077 - 2.1e-08 33.7 0.0 3.1e-08 33.1 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF116077 - 9e-07 29.0 0.0 2.2e-06 27.7 0.0 1.5 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF116077 - 0.00047 20.4 0.0 0.0014 18.9 0.0 1.8 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain NmrA PF05368.13 ORF116077 - 0.0045 16.6 0.0 0.0068 16.0 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family RNA_pol_3_Rpc31 PF11705.8 ORF114423 - 0.0095 16.2 10.2 0.0095 16.2 10.2 1.9 3 0 0 3 3 1 1 DNA-directed RNA polymerase III subunit Rpc31 BUD22 PF09073.10 ORF114423 - 0.027 13.8 15.5 0.013 14.8 13.3 1.6 2 0 0 2 2 2 0 BUD22 DUF4746 PF15928.5 ORF114423 - 0.22 10.9 10.3 0.32 10.4 10.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Myc_N PF01056.18 ORF114423 - 0.29 11.0 11.5 0.46 10.3 11.5 1.2 1 0 0 1 1 1 0 Myc amino-terminal region CobT PF06213.12 ORF114423 - 0.89 8.9 18.9 1.9 7.8 18.9 1.6 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Mpp10 PF04006.12 ORF114423 - 1.4 7.2 23.7 2.8 6.3 23.8 1.4 1 1 0 1 1 1 0 Mpp10 protein Paf1 PF03985.13 ORF114423 - 1.9 7.4 20.9 2.8 6.8 20.9 1.3 1 0 0 1 1 1 0 Paf1 D123 PF07065.14 ORF114423 - 2.9 7.0 6.5 7.4 5.6 5.5 2.0 2 0 0 2 2 2 0 D123 Nop14 PF04147.12 ORF114423 - 3 5.9 20.7 4.1 5.5 20.7 1.2 1 0 0 1 1 1 0 Nop14-like family TRAP_alpha PF03896.16 ORF114423 - 3.6 6.7 8.9 6.6 5.8 8.9 1.4 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Connexin PF00029.19 ORF114423 - 3.6 7.3 4.1 6.4 6.5 4.1 1.3 1 0 0 1 1 1 0 Connexin Raftlin PF15250.6 ORF114423 - 3.7 6.2 9.1 5.2 5.7 9.1 1.2 1 0 0 1 1 1 0 Raftlin RR_TM4-6 PF06459.12 ORF114423 - 3.8 7.3 13.3 6.4 6.5 13.3 1.4 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF4820 PF16091.5 ORF114423 - 5 6.4 6.7 8.8 5.6 6.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Presenilin PF01080.17 ORF114423 - 7.1 5.3 10.1 9.1 4.9 10.1 1.2 1 0 0 1 1 1 0 Presenilin Tim54 PF11711.8 ORF114423 - 8.2 5.1 9.9 14 4.3 9.9 1.3 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF4441 PF14536.6 ORF113466 - 0.34 11.1 7.3 0.097 12.9 1.7 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF4441) PP2C PF00481.21 ORF113350 - 3.5e-46 157.9 0.0 4.3e-46 157.6 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C Enolase_C PF00113.22 ORF110924 - 6.5e-135 449.1 0.0 7.7e-135 448.8 0.0 1.0 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 ORF110924 - 2.5e-16 60.0 0.1 5.6e-16 58.9 0.1 1.6 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 ORF110924 - 3e-08 33.5 0.0 7.8e-08 32.1 0.0 1.7 1 1 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 ORF110924 - 1.4e-06 27.7 0.4 1.4e-06 27.7 0.4 1.6 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus ADH_zinc_N PF00107.26 ORF108057 - 3.8e-10 39.8 0.0 6.5e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF108057 - 3.2e-08 33.4 0.0 1.9e-07 30.9 0.0 2.0 1 1 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 ORF108057 - 1e-06 29.8 0.0 4.1e-06 27.9 0.0 1.9 2 1 0 2 2 2 1 Zinc-binding dehydrogenase adh_short PF00106.25 ORF108057 - 0.037 13.5 0.0 0.055 12.9 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase Epimerase PF01370.21 ORF108057 - 0.037 13.5 0.0 0.059 12.8 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family YlbD_coat PF14071.6 ORF108057 - 0.057 13.7 0.1 0.12 12.6 0.1 1.5 1 0 0 1 1 1 0 Putative coat protein TetR_C_31 PF17940.1 ORF107106 - 0.15 12.3 2.9 1.5 9.1 0.5 2.3 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain CsgG PF03783.14 ORF106137 - 0.17 11.2 0.1 0.27 10.5 0.1 1.2 1 0 0 1 1 1 0 Curli production assembly/transport component CsgG MscS_porin PF12795.7 NODE_17950_length_1045_cov_3.432673_g13681_i0reverse_frame_2 - 3e-29 102.3 37.9 3e-29 102.3 37.9 2.7 2 1 1 3 3 3 1 Mechanosensitive ion channel porin domain DIRP PF06584.13 NODE_17950_length_1045_cov_3.432673_g13681_i0reverse_frame_2 - 0.0048 17.1 0.7 0.022 14.9 0.7 2.2 1 0 0 1 1 1 1 DIRP T2SSF PF00482.23 NODE_17950_length_1045_cov_3.432673_g13681_i0reverse_frame_2 - 2.5 8.1 11.6 6.1 6.8 2.4 3.3 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein F DUF5463 PF17551.2 NODE_17941_length_1045_cov_105.891089_g12568_i1reverse_frame_3 - 0.44 10.5 7.8 8.1 6.5 1.3 3.1 2 0 0 2 2 2 0 Family of unknown function (DUF5463) Herpes_LMP1 PF05297.11 NODE_17941_length_1045_cov_105.891089_g12568_i1forward_frame_2 - 2 7.5 7.9 2.7 7.1 7.9 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF5558 PF17713.1 NODE_17911_length_1046_cov_75.488625_g13650_i0reverse_frame_3 - 7.5 6.9 7.9 23 5.4 1.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5558) Ribosomal_L22e PF01776.17 ORF98009 - 0.053 13.9 3.0 0.1 13.0 0.5 2.2 2 0 0 2 2 2 0 Ribosomal L22e protein family HTH_52 PF18576.1 ORF98009 - 0.16 12.2 0.7 8.9 6.6 0.0 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain Epimerase PF01370.21 ORF90946 - 3e-22 79.2 0.0 6.1e-22 78.3 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF90946 - 1.9e-18 66.5 0.0 2.7e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF90946 - 6.3e-14 52.1 0.0 1.1e-13 51.3 0.0 1.5 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 ORF90946 - 8.9e-12 45.3 0.0 1.8e-11 44.2 0.0 1.6 1 1 1 2 2 2 1 NAD(P)H-binding NAD_binding_4 PF07993.12 ORF90946 - 9.3e-07 28.3 0.0 1.7e-06 27.4 0.0 1.5 1 1 0 1 1 1 1 Male sterility protein NmrA PF05368.13 ORF90946 - 7.1e-05 22.5 0.0 0.0002 21.0 0.0 1.9 1 1 0 1 1 1 1 NmrA-like family Polysacc_synt_2 PF02719.15 ORF90946 - 0.00053 19.2 0.0 0.00095 18.4 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF90946 - 0.0006 19.8 0.0 0.0038 17.1 0.0 1.9 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF90946 - 0.045 14.0 0.0 0.084 13.1 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain HA2 PF04408.23 ORF88497 - 7.9e-26 90.5 0.0 2.2e-25 89.0 0.0 1.7 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 ORF88497 - 1.8e-22 79.5 0.0 3e-22 78.8 0.0 1.4 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold SCO1-SenC PF02630.14 ORF88497 - 0.024 14.6 0.0 0.053 13.4 0.0 1.5 1 0 0 1 1 1 0 SCO1/SenC LRR_9 PF14580.6 ORF83849 - 9.8e-25 87.1 7.1 9.6e-17 61.0 1.3 2.9 1 1 1 2 2 2 2 Leucine-rich repeat LRR_4 PF12799.7 ORF83849 - 1.4e-24 85.7 30.1 6.2e-07 29.6 1.1 6.2 1 1 4 6 6 6 6 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF83849 - 1.5e-23 82.3 26.8 1.7e-08 34.1 4.4 4.6 4 1 0 4 4 4 3 Leucine rich repeat LRR_1 PF00560.33 ORF83849 - 1.2e-08 34.4 26.0 0.04 14.4 0.5 8.0 7 1 0 7 7 7 3 Leucine Rich Repeat LRR_6 PF13516.6 ORF83849 - 1.2e-07 31.2 23.7 0.2 11.8 0.2 8.7 9 1 0 9 9 9 3 Leucine Rich repeat LRR_5 PF13306.6 ORF83849 - 1.9 8.5 6.3 7.7 6.5 0.1 3.0 2 1 0 2 2 2 0 BspA type Leucine rich repeat region (6 copies) peroxidase PF00141.23 ORF81215 - 7.3e-23 81.5 0.0 1.1e-22 80.9 0.0 1.2 1 0 0 1 1 1 1 Peroxidase Rho_N PF07498.12 ORF71950 - 0.064 13.2 1.1 0.93 9.5 0.2 2.7 2 0 0 2 2 2 0 Rho termination factor, N-terminal domain TetR_C_17 PF17922.1 ORF71950 - 0.15 12.2 2.8 0.87 9.7 0.6 2.7 2 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain GrpE PF01025.19 ORF71950 - 1.4 8.6 10.1 5.9 6.5 0.3 3.5 2 1 2 4 4 4 0 GrpE peroxidase PF00141.23 ORF70884 - 7.3e-23 81.5 0.0 1.1e-22 80.9 0.0 1.2 1 0 0 1 1 1 1 Peroxidase RCC1_2 PF13540.6 ORF69921 - 4e-10 39.2 9.9 0.27 11.1 0.0 6.5 6 0 0 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF69921 - 0.0014 18.8 7.9 3.4 7.7 0.2 5.3 5 1 0 5 5 5 1 Uncharacterised ACR, YagE family COG1723 MPP6 PF10175.9 ORF69921 - 0.027 15.0 0.1 0.044 14.3 0.1 1.3 1 0 0 1 1 1 0 M-phase phosphoprotein 6 Radial_spoke PF04712.12 ORF69921 - 0.059 12.3 8.0 0.096 11.6 8.0 1.2 1 0 0 1 1 1 0 Radial spokehead-like protein Adhes-Ig_like PF09085.10 ORF69921 - 0.28 11.3 2.9 0.87 9.7 1.8 2.5 3 1 1 4 4 4 0 Adhesion molecule, immunoglobulin-like RNA_pol_3_Rpc31 PF11705.8 ORF69921 - 0.75 10.0 5.9 1.2 9.3 5.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DUF4746 PF15928.5 ORF69921 - 1.4 8.2 6.5 1 8.7 4.7 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4746) TetR_C_23 PF17931.1 ORF65480 - 5.3 7.2 10.2 0.22 11.7 3.0 2.4 3 1 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Peptidase_M8 PF01457.16 ORF62700 - 1.8e-27 96.2 4.8 2.6e-27 95.7 4.8 1.2 1 0 0 1 1 1 1 Leishmanolysin MORN PF02493.20 ORF58743 - 0.021 14.7 0.2 0.59 10.1 0.1 2.5 2 0 0 2 2 2 0 MORN repeat DDR_swiveling PF18427.1 ORF58743 - 5.7 6.9 6.2 40 4.2 0.4 2.4 1 1 0 1 1 1 0 DD-reactivating factor swiveling domain DUF1465 PF07323.12 ORF57578 - 0.63 9.9 5.9 0.31 10.9 0.5 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1465) DUF4140 PF13600.6 ORF57578 - 0.83 10.1 7.2 5.9 7.4 1.0 3.3 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) Seryl_tRNA_N PF02403.22 ORF57578 - 0.94 9.7 25.9 3.6 7.9 0.8 4.2 2 1 2 4 4 4 0 Seryl-tRNA synthetase N-terminal domain FlaC_arch PF05377.11 ORF57578 - 1.8 9.0 17.5 0.51 10.8 0.4 4.1 3 2 0 3 3 3 0 Flagella accessory protein C (FlaC) Spc24 PF08286.11 ORF57578 - 2.2 8.5 22.8 0.15 12.3 6.8 3.4 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 Cep57_MT_bd PF06657.13 ORF57578 - 2.6 8.6 10.0 7.5 7.1 1.0 3.5 3 1 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 DUF848 PF05852.11 ORF57578 - 3.5 7.7 14.7 4.7 7.3 5.3 3.3 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) CENP-F_leu_zip PF10473.9 ORF57578 - 3.7 7.6 24.0 35 4.4 14.5 3.6 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CLZ PF16526.5 ORF57578 - 7.2 7.1 14.2 28 5.2 2.9 3.9 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels peroxidase PF00141.23 ORF51993 - 7.3e-23 81.5 0.0 1.1e-22 80.9 0.0 1.2 1 0 0 1 1 1 1 Peroxidase BRCT_2 PF16589.5 ORF51352 - 4.1e-13 49.6 0.1 8.8e-13 48.5 0.1 1.6 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 ORF51352 - 0.094 13.1 0.1 0.27 11.6 0.1 1.9 1 1 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain CHD5 PF04420.14 ORF51352 - 1.2 8.9 3.3 2.3 8.1 3.3 1.4 1 0 0 1 1 1 0 CHD5-like protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks47.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks47.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks47.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks47.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:24 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ion_trans PF00520.31 ORF50254 - 9.7e-05 21.7 4.6 0.00013 21.3 4.6 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF50254 - 0.0031 17.3 0.0 0.017 15.1 0.0 2.3 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF50254 - 0.0035 16.8 0.0 0.016 14.7 0.0 2.1 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF50254 - 0.054 13.0 0.0 0.22 11.1 0.0 2.0 2 0 0 2 2 2 0 EF hand Olduvai PF06758.13 ORF46846 - 0.05 13.9 0.2 0.16 12.3 0.2 1.9 1 0 0 1 1 1 0 Olduvai domain Peptidase_C12 PF01088.21 ORF40390 - 7.8e-62 208.7 1.1 9e-62 208.6 0.0 1.6 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase, family 1 UCH_C PF18031.1 ORF40390 - 7.5e-18 64.2 4.2 7.5e-18 64.2 4.2 2.1 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolases Aa_trans PF01490.18 ORF40057 - 1.1e-22 80.3 17.2 2.8e-22 79.0 17.2 1.6 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein Kelch_4 PF13418.6 ORF36760 - 4.8e-24 84.1 0.2 8.9e-08 32.0 0.0 3.4 3 0 0 3 3 3 3 Galactose oxidase, central domain BTB PF00651.31 ORF36760 - 3.2e-22 78.9 0.4 6.4e-21 74.7 0.1 2.2 1 1 1 2 2 2 1 BTB/POZ domain Kelch_1 PF01344.25 ORF36760 - 3.8e-21 74.4 0.0 7.6e-09 35.0 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_6 PF13964.6 ORF36760 - 1.3e-19 69.7 0.2 1e-06 28.8 0.0 3.4 2 1 1 3 3 3 3 Kelch motif Kelch_2 PF07646.15 ORF36760 - 1.8e-19 68.9 1.2 1.4e-06 28.1 0.0 3.7 3 1 0 3 3 3 3 Kelch motif Kelch_3 PF13415.6 ORF36760 - 5e-19 68.1 1.0 1.8e-06 28.1 0.0 4.2 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF36760 - 1.2e-16 60.3 0.0 5e-06 26.4 0.0 3.7 3 0 0 3 3 3 3 Kelch motif BACK PF07707.15 ORF36760 - 0.00014 21.9 0.1 0.083 13.0 0.0 3.2 3 0 0 3 3 3 1 BTB And C-terminal Kelch Myb_DNA-binding PF00249.31 ORF35995 - 7.2e-13 48.5 1.6 8.4e-13 48.3 0.3 1.9 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF35995 - 0.00053 19.8 0.2 0.00053 19.8 0.2 2.7 2 1 0 2 2 2 1 Myb DNA-binding like Myb_DNA-bind_6 PF13921.6 ORF35995 - 0.00073 19.7 0.1 0.002 18.3 0.1 1.8 1 0 0 1 1 1 1 Myb-like DNA-binding domain EFTUD2 PF16004.5 ORF35995 - 0.24 12.0 11.4 0.075 13.6 3.0 2.8 3 1 0 3 3 3 0 116 kDa U5 small nuclear ribonucleoprotein component N-terminus FMO-like PF00743.19 ORF35650 - 3.9e-25 88.3 0.0 2.3e-24 85.7 0.0 1.8 1 1 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF35650 - 3.9e-08 32.9 0.0 1e-06 28.2 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF35650 - 5.6e-07 29.1 0.0 0.0031 16.8 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 ORF35650 - 7.4e-05 22.1 0.2 0.00014 21.1 0.0 1.4 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox PF00070.27 ORF35650 - 0.0029 18.1 0.2 0.0086 16.6 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 ORF35650 - 0.0045 16.4 0.2 0.0072 15.7 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 ORF35650 - 0.021 13.9 0.0 0.12 11.5 0.0 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A NAD_binding_7 PF13241.6 ORF35650 - 0.022 15.2 0.0 0.039 14.4 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding MOZART1 PF12554.8 ORF30426 - 0.009 15.8 0.2 0.016 15.0 0.2 1.4 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated DUF2561 PF10812.8 ORF30426 - 4.9 7.1 5.8 2.3 8.2 2.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2561) TPR_12 PF13424.6 ORF21460 - 4e-15 55.9 19.8 6.4e-07 29.6 0.1 4.2 3 1 2 5 5 5 4 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF21460 - 9.8e-06 25.2 14.3 0.0011 18.5 14.3 2.8 1 1 0 1 1 1 1 MalT-like TPR region TPR_10 PF13374.6 ORF21460 - 0.00039 20.2 10.2 0.017 15.0 0.1 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_15 PF13429.6 ORF21460 - 0.008 15.4 12.1 1.6 7.8 0.6 3.1 2 1 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF21460 - 0.0092 16.1 2.1 5.2 7.5 0.1 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat ANAPC5 PF12862.7 ORF21460 - 0.022 14.8 5.9 0.47 10.5 0.1 3.6 3 1 1 4 4 4 0 Anaphase-promoting complex subunit 5 TPR_2 PF07719.17 ORF21460 - 0.046 13.9 13.2 4 7.8 0.2 5.5 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF21460 - 0.047 14.5 13.6 27 5.9 0.0 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat LodA_N PF17990.1 ORF21460 - 0.078 12.9 0.5 0.14 12.1 0.2 1.6 2 0 0 2 2 2 0 L-Lysine epsilon oxidase N-terminal DUF4253 PF14062.6 ORF21460 - 0.13 12.5 1.5 13 6.0 0.1 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4253) TPR_7 PF13176.6 ORF21460 - 1.1 9.4 7.1 15 5.9 0.1 4.7 4 1 1 5 5 5 0 Tetratricopeptide repeat Methyltransf_31 PF13847.6 ORF21203 - 7.9e-14 51.7 0.0 1.2e-13 51.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF21203 - 3.9e-11 43.5 0.0 6.6e-11 42.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF21203 - 1.7e-10 41.4 0.0 2.9e-10 40.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF21203 - 2.4e-07 31.4 0.0 4.4e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF21203 - 0.00022 20.6 0.0 0.00036 19.9 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 ORF21203 - 0.00025 20.9 0.0 0.00039 20.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF21203 - 0.053 13.0 0.0 0.55 9.7 0.0 2.0 2 0 0 2 2 2 0 Putative methyltransferase Methyltransf_24 PF13578.6 ORF21203 - 0.062 14.3 0.0 0.099 13.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain TPR_19 PF14559.6 ORF20471 - 3.8e-14 53.0 0.4 2.6e-05 24.7 0.0 5.0 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF20471 - 1.1e-12 47.1 13.0 0.062 13.4 1.8 7.4 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_14 PF13428.6 ORF20471 - 8.8e-09 35.5 0.7 0.99 10.4 0.0 6.2 5 1 1 6 6 6 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF20471 - 2e-08 34.4 2.6 0.37 11.5 0.0 6.1 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF20471 - 1.7e-06 28.2 8.2 0.086 13.1 1.2 5.8 3 3 2 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF20471 - 2.6e-06 27.0 15.5 0.66 9.9 1.4 6.5 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF20471 - 3.3e-06 26.9 11.6 6 7.3 0.0 7.3 7 0 0 7 7 7 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF20471 - 2.5e-05 24.4 12.7 0.47 10.7 0.3 4.5 3 1 1 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF20471 - 0.00021 21.9 0.8 0.23 12.2 0.0 3.6 3 1 0 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF20471 - 0.0022 17.9 2.0 46 4.4 0.0 5.2 5 1 0 6 6 6 0 Tetratricopeptide repeat TPR_15 PF13429.6 ORF20471 - 0.0056 15.9 2.5 0.077 12.2 0.6 3.0 2 1 0 2 2 2 1 Tetratricopeptide repeat Cnd3 PF12719.7 ORF20471 - 0.006 15.8 0.3 0.011 14.9 0.3 1.5 1 0 0 1 1 1 1 Nuclear condensing complex subunits, C-term domain TPR_17 PF13431.6 ORF20471 - 0.027 14.8 3.2 0.99 9.9 0.0 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF20471 - 0.038 13.7 0.8 1.1 9.0 0.0 3.3 3 0 0 3 3 3 0 TPR repeat AbiJ_NTD5 PF18865.1 ORF20471 - 0.038 13.8 0.0 2 8.3 0.0 2.5 2 0 0 2 2 2 0 AbiJ N-terminal domain 5 Fis1_TPR_C PF14853.6 ORF20471 - 0.068 13.3 0.3 28 4.9 0.0 3.3 3 0 0 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat Acetyltransf_13 PF13880.6 ORF152646 - 1.4e-12 47.4 0.0 3.2e-12 46.3 0.0 1.7 1 0 0 1 1 1 1 ESCO1/2 acetyl-transferase CblD PF07434.11 ORF152646 - 0.022 13.7 0.0 0.029 13.4 0.0 1.1 1 0 0 1 1 1 0 CblD like pilus biogenesis initiator AhpC-TSA PF00578.21 ORF149627 - 9.4e-11 41.7 0.0 1.4e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.9 ORF149627 - 4e-06 26.6 0.0 9.2e-06 25.4 0.0 1.7 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.10 ORF149627 - 0.006 16.3 0.0 0.0086 15.8 0.0 1.2 1 0 0 1 1 1 1 Redoxin EF-hand_1 PF00036.32 ORF149406 - 5e-06 25.7 0.0 1.2e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF149406 - 6.7e-06 25.9 0.1 1.2e-05 25.0 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF149406 - 0.00012 21.4 0.1 0.00027 20.3 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF149406 - 0.00025 20.7 0.1 0.00059 19.6 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF149406 - 0.0027 18.1 0.0 0.0076 16.7 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_4 PF12763.7 ORF149406 - 0.0042 17.0 0.1 0.009 15.9 0.1 1.6 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand Vfa1 PF08432.10 ORF149406 - 5.2 7.4 12.4 9.2 6.6 12.4 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF3450 PF11932.8 ORF148500 - 0.0051 16.2 1.4 0.0051 16.2 1.4 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF3450) Gemin7 PF11095.8 ORF148500 - 0.0092 15.8 0.0 0.02 14.8 0.0 1.5 1 0 0 1 1 1 1 Gem-associated protein 7 (Gemin7) GNAT_acetyltran PF12746.7 ORF148500 - 0.56 9.7 12.5 1.7 8.1 3.1 2.2 2 0 0 2 2 2 0 GNAT acetyltransferase Nop53 PF07767.11 ORF148500 - 0.97 8.8 33.4 1.6 8.1 11.9 2.2 2 0 0 2 2 2 0 Nop53 (60S ribosomal biogenesis) Fzo_mitofusin PF04799.13 ORF148500 - 7.5 6.1 10.5 0.5 9.9 1.2 2.8 2 1 1 3 3 3 0 fzo-like conserved region DUF2203 PF09969.9 ORF148500 - 9.5 7.0 13.9 7.5 7.3 1.3 3.4 2 1 2 4 4 4 0 Uncharacterized conserved protein (DUF2203) CHAT PF12770.7 ORF145255 - 2.2e-54 184.8 0.2 2.6e-54 184.6 0.2 1.0 1 0 0 1 1 1 1 CHAT domain Peptidase_C50 PF03568.17 ORF145255 - 1.1e-05 24.8 0.3 0.021 14.0 0.0 2.1 2 0 0 2 2 2 2 Peptidase family C50 Peptidase_M8 PF01457.16 ORF141558 - 1.8e-27 96.2 4.8 2.6e-27 95.7 4.8 1.2 1 0 0 1 1 1 1 Leishmanolysin Kelch_6 PF13964.6 ORF139727 - 0.00078 19.6 1.4 2.7 8.4 0.0 3.7 2 1 1 3 3 3 2 Kelch motif Kelch_4 PF13418.6 ORF139727 - 0.033 14.2 1.7 8.8 6.4 0.0 3.4 3 0 0 3 3 3 0 Galactose oxidase, central domain SBP_bac_8 PF13416.6 ORF139270 - 6.4e-39 134.5 7.2 8.2e-39 134.1 7.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 ORF139270 - 2.9e-38 131.7 3.2 4e-38 131.2 3.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 ORF139270 - 1.6e-14 54.2 0.0 2.4e-14 53.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 ORF139270 - 2.1e-13 50.9 11.2 3.8e-13 50.1 11.2 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Lipoprotein_8 PF02030.15 ORF139270 - 2e-09 36.8 0.1 7.5e-09 34.8 0.1 1.8 2 0 0 2 2 2 1 Hypothetical lipoprotein (MG045 family) VraX PF17412.2 ORF134525 - 0.02 14.5 0.0 6.5 6.5 0.0 3.2 3 0 0 3 3 3 0 Family of unknown function Calpain_III PF01067.22 ORF134525 - 0.03 14.6 0.0 0.065 13.5 0.0 1.6 1 0 0 1 1 1 0 Calpain large subunit, domain III ABC_tran PF00005.27 ORF133241 - 3.6e-30 105.3 0.1 6.1e-30 104.5 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF133241 - 4.1e-10 39.5 1.3 1.6e-05 24.4 0.3 2.4 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF133241 - 1.3e-05 25.1 0.1 0.013 15.3 0.1 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system NB-ARC PF00931.22 ORF133241 - 0.002 17.4 3.1 0.025 13.8 3.1 2.1 1 1 0 1 1 1 1 NB-ARC domain MMR_HSR1 PF01926.23 ORF133241 - 0.0025 17.9 0.2 0.0076 16.3 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF133241 - 0.0053 16.5 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF133241 - 0.0085 15.8 0.2 0.014 15.2 0.2 1.3 1 0 0 1 1 1 1 AAA ATPase domain DUF87 PF01935.17 ORF133241 - 0.01 16.0 1.0 0.018 15.1 0.2 1.8 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_23 PF13476.6 ORF133241 - 0.012 16.1 1.6 0.032 14.7 1.6 1.9 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF133241 - 0.025 14.3 0.3 0.27 10.9 0.1 2.0 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 ORF133241 - 0.026 13.5 0.5 0.091 11.6 0.5 1.8 1 1 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain ATP-synt_ab PF00006.25 ORF133241 - 0.064 12.9 0.0 0.08 12.6 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_7 PF12775.7 ORF133241 - 0.075 12.5 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region HTH_46 PF15977.5 ORF133241 - 0.12 12.4 0.0 3.6 7.7 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA binding Dynein_C PF18199.1 ORF132069 - 5.1e-115 383.9 0.1 6e-115 383.7 0.1 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF132069 - 3.4e-06 27.0 0.0 7.3e-06 25.9 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain DUF4148 PF13663.6 ORF132069 - 0.14 12.4 0.2 0.3 11.3 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) Wzz PF02706.15 ORF127384 - 6.8e-15 55.1 0.9 1.2e-14 54.3 0.0 1.9 2 0 0 2 2 2 1 Chain length determinant protein GNVR PF13807.6 ORF127384 - 0.011 15.6 0.3 0.13 12.2 0.0 2.5 2 0 0 2 2 2 0 G-rich domain on putative tyrosine kinase Alpha-L-AF_C PF06964.12 ORF127384 - 0.14 12.3 1.1 3.2 7.8 1.1 2.2 1 1 0 1 1 1 0 Alpha-L-arabinofuranosidase C-terminal domain Patatin PF01734.22 ORF125408 - 2.5e-23 83.3 0.1 6.2e-23 82.0 0.1 1.6 1 1 0 1 1 1 1 Patatin-like phospholipase WXG100 PF06013.12 ORF12237 - 0.2 11.9 0.0 0.39 11.0 0.0 1.4 1 0 0 1 1 1 0 Proteins of 100 residues with WXG Peptidase_C12 PF01088.21 ORF118418 - 7.8e-62 208.7 1.1 9e-62 208.6 0.0 1.6 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase, family 1 UCH_C PF18031.1 ORF118418 - 7.5e-18 64.2 4.2 7.5e-18 64.2 4.2 2.1 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolases DUF1345 PF07077.11 ORF106037 - 0.059 13.1 15.9 0.25 11.1 5.4 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1345) HemY_N PF07219.13 ORF106037 - 2.7 8.3 8.8 24 5.2 0.2 3.4 3 0 0 3 3 3 0 HemY protein N-terminus VIT PF08487.10 NODE_18075_length_1041_cov_57.712724_g13776_i0reverse_frame_1 - 7.1e-23 80.9 0.1 1.3e-22 80.1 0.1 1.4 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VIT_2 PF13757.6 NODE_18075_length_1041_cov_57.712724_g13776_i0reverse_frame_1 - 0.00034 20.5 0.0 0.00097 19.0 0.0 1.8 1 1 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VWA_3 PF13768.6 NODE_18075_length_1041_cov_57.712724_g13776_i0reverse_frame_1 - 0.00079 19.4 0.0 0.0015 18.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 NODE_18075_length_1041_cov_57.712724_g13776_i0reverse_frame_1 - 0.0029 18.2 0.1 0.013 16.2 0.0 2.0 2 0 0 2 2 2 1 von Willebrand factor type A domain UNC119_bdg PF15435.6 NODE_17968_length_1044_cov_179.882061_g12870_i1forward_frame_3 - 0.057 13.0 0.9 0.099 12.2 0.9 1.3 1 0 0 1 1 1 0 UNC119-binding protein C5orf30 homologue SMP PF04927.12 ORF99831 - 5.1 7.7 7.0 11 6.6 0.1 2.7 2 0 0 2 2 2 0 Seed maturation protein EamA PF00892.20 ORF99710 - 4.9e-22 78.6 35.1 8e-16 58.5 16.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 ORF99710 - 0.01 15.2 16.9 0.02 14.2 16.9 1.7 1 1 0 1 1 1 0 Triose-phosphate Transporter family MFS_1 PF07690.16 ORF99564 - 4.5e-11 42.3 27.3 4.5e-11 42.3 27.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily PetG PF02529.15 ORF99564 - 0.42 10.5 4.2 1.9 8.4 0.3 2.6 2 0 0 2 2 2 0 Cytochrome B6-F complex subunit 5 VitK2_biosynth PF02621.14 ORF95776 - 0.023 14.2 0.0 0.035 13.6 0.0 1.2 1 0 0 1 1 1 0 Menaquinone biosynthesis IMPDH PF00478.25 ORF93137 - 3.8e-78 262.9 0.5 4.7e-78 262.6 0.5 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 ORF93137 - 0.0064 15.6 6.0 0.0098 15.0 5.5 1.4 1 1 0 1 1 1 1 FMN-dependent dehydrogenase NBD_C PF17042.5 ORF93137 - 0.057 13.9 0.1 0.37 11.3 0.0 2.1 1 1 1 2 2 2 0 Nucleotide-binding C-terminal domain SIS PF01380.22 ORF90806 - 2.2e-15 56.6 0.0 3e-07 30.3 0.0 2.1 2 0 0 2 2 2 2 SIS domain PIP5K PF01504.18 ORF90231 - 2.7e-29 102.3 0.0 9.4e-27 93.9 0.0 2.1 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase Exo_endo_phos PF03372.23 ORF89936 - 6.8e-07 29.0 0.0 1.3e-06 28.1 0.0 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family PIR PF00399.19 ORF89936 - 0.12 11.9 0.2 0.28 10.8 0.2 1.6 1 0 0 1 1 1 0 Yeast PIR protein repeat DAO PF01266.24 ORF84832 - 2.6e-29 102.9 0.0 4.3e-29 102.2 0.0 1.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF84832 - 1.6e-07 30.8 0.0 9.9e-05 21.7 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 ORF84832 - 0.00011 21.6 0.1 0.00018 21.0 0.1 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 ORF84832 - 0.0013 17.9 0.0 0.041 12.9 0.0 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein NAD_binding_8 PF13450.6 ORF84832 - 0.0018 18.5 0.0 0.0076 16.5 0.0 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 ORF84832 - 0.0038 16.0 0.1 0.17 10.6 0.0 2.3 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 ORF84832 - 0.0084 15.4 0.1 0.02 14.1 0.0 1.6 2 0 0 2 2 2 1 Thi4 family NAD_binding_9 PF13454.6 ORF84832 - 0.011 15.7 0.0 0.4 10.6 0.0 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding Pyr_redox_3 PF13738.6 ORF84832 - 0.12 11.6 0.7 0.31 10.2 0.0 1.9 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase MreB_Mbl PF06723.13 ORF82911 - 1.3e-150 500.8 3.4 1.6e-150 500.5 3.4 1.0 1 0 0 1 1 1 1 MreB/Mbl protein HSP70 PF00012.20 ORF82911 - 2.3e-13 49.2 0.2 4.6e-13 48.2 0.1 1.6 1 1 1 2 2 2 1 Hsp70 protein FtsA PF14450.6 ORF82911 - 2.4e-11 43.9 0.2 8.2e-11 42.2 0.0 1.9 2 0 0 2 2 2 1 Cell division protein FtsA Actin PF00022.19 ORF82911 - 3.4e-10 39.1 0.0 2.3e-06 26.5 0.0 2.3 1 1 0 2 2 2 2 Actin PilM_2 PF11104.8 ORF82911 - 1.2e-07 31.2 0.0 0.0025 16.9 0.0 2.4 2 0 0 2 2 2 2 Type IV pilus assembly protein PilM; Ppx-GppA PF02541.16 ORF82911 - 0.00063 19.3 0.1 0.0011 18.5 0.1 1.4 1 0 0 1 1 1 1 Ppx/GppA phosphatase family EutA PF06277.11 ORF82911 - 0.0026 16.7 0.2 0.0041 16.0 0.2 1.3 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutA DDR PF08841.10 ORF82911 - 0.0042 16.1 0.4 0.012 14.7 0.1 1.8 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain Acyl-CoA_dh_N PF02771.16 ORF81470 - 3.6e-27 95.3 0.0 6.1e-27 94.5 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 ORF81470 - 2e-22 79.2 0.0 5.8e-22 77.7 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 ORF81470 - 4.5e-08 33.4 0.1 9.6e-08 32.4 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain TPR_12 PF13424.6 ORF79068 - 4.1e-60 200.0 42.7 2.5e-15 56.5 1.4 4.6 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_10 PF13374.6 ORF79068 - 2.5e-45 151.2 20.4 9.1e-10 38.1 0.3 6.4 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_7 PF13176.6 ORF79068 - 5.6e-14 51.1 17.4 0.0052 16.7 0.2 6.3 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 ORF79068 - 1.1e-13 51.5 14.3 1.1e-05 25.9 0.6 5.5 4 2 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF79068 - 1.9e-13 49.4 12.6 0.07 13.3 0.3 6.4 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF79068 - 6.9e-12 45.4 10.4 6.3e-06 25.8 0.7 2.3 1 1 1 2 2 2 2 MalT-like TPR region TPR_1 PF00515.28 ORF79068 - 1e-09 37.8 7.4 0.63 10.0 0.0 5.9 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF79068 - 1.3e-09 38.0 17.9 0.081 13.8 0.4 6.6 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF79068 - 2.2e-09 36.8 12.2 0.088 13.1 0.1 6.1 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_3 PF07720.12 ORF79068 - 1.9e-06 27.7 0.0 5.2 7.2 0.0 5.0 5 0 0 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF79068 - 3e-06 27.4 2.4 0.45 10.8 0.1 4.0 2 1 0 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 ORF79068 - 9.7e-06 26.0 14.1 0.083 13.4 0.8 4.6 3 2 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF79068 - 1.3e-05 25.2 1.1 7.4 7.2 0.0 6.1 6 0 0 6 6 6 0 Tetratricopeptide repeat RPN6_N PF18055.1 ORF79068 - 2.9e-05 24.4 8.3 0.25 11.7 0.0 3.3 3 0 0 3 3 3 2 26S proteasome regulatory subunit RPN6 N-terminal domain PPR PF01535.20 ORF79068 - 0.00023 21.2 7.3 2.9 8.3 0.1 5.5 6 0 0 6 6 5 1 PPR repeat TPR_5 PF12688.7 ORF79068 - 0.0044 17.2 15.4 0.018 15.3 0.4 4.2 2 1 3 5 5 4 2 Tetratrico peptide repeat TPR_4 PF07721.14 ORF79068 - 0.012 16.1 21.3 3.1 8.7 0.0 7.2 8 0 0 8 8 6 0 Tetratricopeptide repeat Phostensin_N PF13916.6 ORF79068 - 0.015 15.6 1.7 11 6.4 0.1 3.8 2 1 1 3 3 3 0 PP1-regulatory protein, Phostensin N-terminal HU-CCDC81_bac_2 PF18175.1 ORF79068 - 0.04 13.8 0.9 0.89 9.5 0.1 2.7 2 0 0 2 2 2 0 CCDC81-like prokaryotic HU domain 2 TssO PF17561.2 ORF79068 - 0.047 13.8 0.1 0.82 9.8 0.0 2.3 2 0 0 2 2 2 0 Type VI secretion system, TssO ComR_TPR PF18710.1 ORF79068 - 0.086 12.4 0.1 0.29 10.7 0.0 1.8 2 0 0 2 2 2 0 ComR tetratricopeptide LppA PF16708.5 ORF79068 - 0.11 12.4 5.9 1.8 8.5 0.1 3.2 3 1 0 3 3 3 0 Lipoprotein confined to pathogenic Mycobacterium Coatomer_E PF04733.14 ORF79068 - 0.24 10.8 12.8 1.4 8.3 2.7 4.4 2 1 2 4 4 4 0 Coatomer epsilon subunit PPR_2 PF13041.6 ORF79068 - 0.4 10.9 3.8 46 4.3 0.1 4.2 5 0 0 5 5 5 0 PPR repeat family L27_2 PF09045.10 ORF79068 - 0.41 10.6 4.0 1.9 8.5 0.6 3.0 2 0 0 2 2 2 0 L27_2 TPR_6 PF13174.6 ORF79068 - 0.66 10.7 12.2 74 4.3 0.2 6.1 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF79068 - 1.3 8.8 7.1 10 5.9 0.1 4.3 5 0 0 5 5 5 0 TPR repeat Lectin_N PF03954.14 ORF79068 - 2.9 7.7 6.1 1 9.1 1.3 2.4 2 1 1 3 3 3 0 Hepatic lectin, N-terminal domain FliT PF05400.13 ORF79068 - 5 8.0 23.0 0.11 13.4 1.7 3.9 4 1 0 4 4 4 0 Flagellar protein FliT WcbI PF18588.1 ORF78880 - 0.076 12.6 0.3 0.22 11.1 0.0 1.8 2 0 0 2 2 2 0 Polysaccharide biosynthesis enzyme WcbI CD34_antigen PF06365.12 ORF75690 - 0.11 12.0 0.0 0.23 11.0 0.0 1.4 1 0 0 1 1 1 0 CD34/Podocalyxin family Rho_RNA_bind PF07497.12 ORF72599 - 0.15 12.0 2.1 6.3 6.8 0.3 3.3 2 1 1 3 3 3 0 Rho termination factor, RNA-binding domain ERM PF00769.19 ORF68937 - 0.54 10.0 38.5 0.12 12.2 21.5 2.2 1 1 1 2 2 2 0 Ezrin/radixin/moesin family EspB_PE PF18625.1 ORF68937 - 0.58 10.7 11.6 12 6.4 1.4 3.9 3 1 0 3 3 3 0 ESX-1 secreted protein B PE domain CENP-F_leu_zip PF10473.9 ORF68937 - 1.1 9.3 33.3 1.3 9.1 2.6 3.0 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HAP1_N PF04849.13 ORF68937 - 2 7.5 33.4 0.013 14.8 20.1 2.1 1 1 1 2 2 2 0 HAP1 N-terminal conserved region TPR_MLP1_2 PF07926.12 ORF68937 - 2.4 8.2 37.0 0.22 11.6 13.3 3.2 1 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein FPP PF05911.11 ORF68937 - 9.8 4.2 25.7 35 2.4 25.7 1.8 1 1 0 1 1 1 0 Filament-like plant protein, long coiled-coil Anophelin PF10731.9 ORF66370 - 0.11 12.3 0.0 0.28 11.1 0.0 1.7 1 0 0 1 1 1 0 Thrombin inhibitor from mosquito RRM_1 PF00076.22 ORF65281 - 8.3e-12 44.8 0.0 1.3e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF65281 - 1.1e-09 37.9 16.3 1.3e-05 25.0 3.3 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF65281 - 1.3e-07 31.2 17.4 0.00022 20.9 2.6 2.6 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF65281 - 4.8e-05 23.2 12.7 0.00089 19.2 0.3 3.0 3 0 0 3 3 3 2 Zinc knuckle OB_RNB PF08206.11 ORF65281 - 0.0027 17.4 0.2 0.028 14.1 0.2 2.9 1 1 0 1 1 1 1 Ribonuclease B OB domain zf-CCHC_4 PF14392.6 ORF65281 - 0.0029 17.3 6.8 0.22 11.3 1.3 2.4 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_2 PF13696.6 ORF65281 - 0.025 14.4 11.7 0.34 10.8 2.1 2.3 2 0 0 2 2 2 0 Zinc knuckle Pkinase PF00069.25 ORF6144 - 3.9e-72 242.8 1.0 4.7e-72 242.5 1.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF6144 - 5.9e-42 143.7 0.1 6.9e-42 143.5 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF6144 - 9.8e-07 28.3 0.4 1.4e-06 27.8 0.4 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF6144 - 4.2e-06 26.0 2.3 6.7e-06 25.3 2.3 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF6144 - 3e-05 23.5 0.0 5.3e-05 22.7 0.0 1.4 1 1 0 1 1 1 1 Kinase-like RIO1 PF01163.22 ORF6144 - 0.012 15.2 0.6 0.022 14.4 0.6 1.4 1 0 0 1 1 1 0 RIO1 family Pkinase_fungal PF17667.1 ORF6144 - 0.017 13.9 0.2 0.03 13.1 0.1 1.4 1 1 0 1 1 1 0 Fungal protein kinase DUF4447 PF14590.6 ORF6144 - 0.033 14.0 0.9 0.54 10.0 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4447) FTA2 PF13095.6 ORF6144 - 0.13 11.8 0.3 0.31 10.6 0.0 1.7 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Ank_2 PF12796.7 ORF57175 - 6e-07 30.0 0.0 7.9e-06 26.4 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) UVR PF02151.19 ORF57175 - 4.1e-06 26.4 7.3 1.3e-05 24.8 5.0 2.5 2 0 0 2 2 2 1 UvrB/uvrC motif Ank_4 PF13637.6 ORF57175 - 1.1e-05 25.8 0.1 0.0007 20.1 0.0 3.0 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF57175 - 7.6e-05 22.9 0.2 0.0013 19.0 0.0 2.7 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF57175 - 0.00047 20.5 0.1 0.0089 16.4 0.0 2.8 3 0 0 3 3 3 1 Ankyrin repeat SH3_3 PF08239.11 ORF57175 - 0.0034 17.6 0.0 0.0068 16.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial SH3 domain Ank_3 PF13606.6 ORF57175 - 0.02 15.4 0.0 0.41 11.4 0.0 2.7 2 0 0 2 2 2 0 Ankyrin repeat Thaumatin PF00314.17 ORF57090 - 1.7e-19 70.3 7.7 2.9e-19 69.6 7.7 1.4 1 1 0 1 1 1 1 Thaumatin family Trehalase PF01204.18 ORF54661 - 1.8e-127 426.3 0.2 2.1e-127 426.1 0.2 1.0 1 0 0 1 1 1 1 Trehalase Bac_rhamnosid6H PF17389.2 ORF54661 - 0.00017 21.0 0.0 0.00025 20.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DUF346 PF03984.13 ORF54661 - 0.021 14.6 1.8 0.024 14.4 0.1 2.0 2 0 0 2 2 2 0 Repeat of unknown function (DUF346) Glyco_hydro_63 PF03200.16 ORF54661 - 0.029 13.2 0.0 0.045 12.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 63 C-terminal domain LysR_substrate PF03466.20 ORF52262 - 4e-25 88.4 0.1 6.2e-25 87.8 0.1 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF52262 - 3.6e-14 52.4 0.7 1.3e-13 50.7 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family ZZ PF00569.17 ORF50829 - 2.9e-12 46.2 9.7 7.8e-12 44.8 9.7 1.7 1 0 0 1 1 1 1 Zinc finger, ZZ type PB1 PF00564.24 ORF50829 - 1.2e-11 44.4 0.2 1.4e-09 37.7 0.0 2.7 2 0 0 2 2 2 2 PB1 domain Ubiquitin_2 PF14560.6 ORF50829 - 0.029 14.8 0.5 0.57 10.7 0.1 2.6 2 0 0 2 2 2 0 Ubiquitin-like domain ODC_AZ PF02100.17 ORF50794 - 0.012 15.6 0.2 0.026 14.5 0.2 1.5 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme Patatin PF01734.22 ORF48084 - 6e-15 56.0 0.0 3.6e-14 53.4 0.0 2.0 1 1 0 1 1 1 1 Patatin-like phospholipase A-2_8-polyST PF07388.11 ORF48084 - 0.11 11.1 0.0 6.9 5.1 0.0 2.3 2 0 0 2 2 2 0 Alpha-2,8-polysialyltransferase (POLYST) LMF1 PF06762.14 ORF45866 - 1.7 7.7 13.9 2.3 7.2 13.9 1.3 1 0 0 1 1 1 0 Lipase maturation factor Spo7 PF03907.13 ORF45866 - 9.4 5.6 8.5 4.5 6.7 6.1 1.6 2 0 0 2 2 2 0 Spo7-like protein ImpE PF07024.13 ORF4472 - 0.19 11.8 0.0 0.41 10.7 0.0 1.5 1 0 0 1 1 1 0 ImpE protein SMP PF04927.12 ORF4005 - 5.1 7.7 7.0 11 6.6 0.1 2.7 2 0 0 2 2 2 0 Seed maturation protein CoA_transf_3 PF02515.17 ORF30719 - 1.6e-101 340.1 0.0 1.8e-101 339.9 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III PARP PF00644.20 ORF28094 - 6.5e-46 156.4 0.0 1.1e-45 155.7 0.0 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain PARP_reg PF02877.14 ORF28094 - 8.5e-35 119.8 4.6 1.5e-34 119.0 4.6 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase, regulatory domain DUF812 PF05667.11 ORF28094 - 0.012 14.6 4.3 0.015 14.2 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Baculo_PEP_C PF04513.12 ORF28094 - 0.3 11.1 2.5 0.5 10.4 1.1 1.8 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DivIC PF04977.15 ORF28094 - 2.1 8.2 5.0 1.8 8.4 0.4 2.3 2 0 0 2 2 2 0 Septum formation initiator Seryl_tRNA_N PF02403.22 ORF28094 - 6.2 7.1 8.9 3.2 8.0 3.4 2.4 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF4834 PF16118.5 ORF24201 - 0.12 13.4 0.2 1.2 10.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) DUF3242 PF11586.8 ORF24201 - 0.12 12.1 0.1 0.22 11.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3242) Gram_pos_anchor PF00746.21 ORF24201 - 2.5 8.1 10.0 3 7.9 0.7 3.1 2 1 1 3 3 3 0 LPXTG cell wall anchor motif Thaumatin PF00314.17 ORF21750 - 1.7e-19 70.3 7.7 2.9e-19 69.6 7.7 1.4 1 1 0 1 1 1 1 Thaumatin family DUF2207 PF09972.9 ORF21341 - 0.00092 18.1 1.5 0.0011 17.8 1.5 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF3671 PF12420.8 ORF21341 - 0.038 14.1 2.6 0.1 12.6 2.6 1.8 1 0 0 1 1 1 0 Protein of unknown function TMIE PF16038.5 ORF21341 - 0.086 12.7 0.1 0.29 11.0 0.1 1.9 1 0 0 1 1 1 0 TMIE protein DUF4834 PF16118.5 ORF21341 - 4.1 8.4 7.4 1.8 9.6 2.8 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) Ycf54 PF10674.9 ORF20043 - 0.029 14.6 0.5 0.076 13.3 0.5 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2488) Pal1 PF08316.11 ORF20043 - 3.6 8.3 10.0 0.094 13.5 1.6 2.5 2 1 1 3 3 3 0 Pal1 cell morphology protein RINGv PF12906.7 ORF138623 - 1.8e-10 40.7 8.5 3.5e-10 39.9 8.5 1.5 1 0 0 1 1 1 1 RING-variant domain FHA PF00498.26 ORF138623 - 2.5e-10 40.6 4.0 4.9e-10 39.6 0.2 3.1 4 0 0 4 4 4 1 FHA domain Yop-YscD_cpl PF16697.5 ORF138623 - 7.1e-07 29.5 0.1 2.1e-05 24.8 0.1 2.4 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain TetR_C_19 PF17924.1 ORF138623 - 0.066 13.8 0.4 0.14 12.7 0.4 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain FANCL_C PF11793.8 ORF138623 - 0.62 10.3 6.5 1.7 8.9 6.5 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_2 PF13639.6 ORF138623 - 0.98 9.8 9.5 1.3 9.4 8.0 2.0 1 1 0 1 1 1 0 Ring finger domain Porin_1 PF00267.21 ORF125016 - 1.3e-146 488.4 24.8 1.4e-146 488.3 24.8 1.0 1 0 0 1 1 1 1 Gram-negative porin Porin_4 PF13609.6 ORF125016 - 1.3e-22 81.0 27.7 1.6e-22 80.6 27.7 1.0 1 0 0 1 1 1 1 Gram-negative porin OMP_b-brl PF13505.6 ORF125016 - 6.9e-05 23.1 31.5 0.015 15.4 17.6 2.8 1 1 1 2 2 2 2 Outer membrane protein beta-barrel domain cNMP_binding PF00027.29 ORF123732 - 0.00017 21.6 0.0 0.00031 20.7 0.0 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Amidase PF01425.21 ORF122272 - 5.8e-32 111.2 0.0 9.8e-32 110.5 0.0 1.3 1 1 0 1 1 1 1 Amidase Peptidase_C2 PF00648.21 ORF12117 - 2e-36 125.6 0.2 2.7e-36 125.1 0.2 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Pkinase PF00069.25 ORF121025 - 4.9e-74 249.0 1.1 5.8e-74 248.8 1.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF121025 - 4.4e-42 144.2 0.1 5.1e-42 143.9 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF121025 - 3e-07 29.7 1.9 3e-07 29.7 1.9 1.5 2 0 0 2 2 2 1 Haspin like kinase domain Kdo PF06293.14 ORF121025 - 2.9e-06 26.8 0.3 4.4e-06 26.2 0.3 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF121025 - 8.8e-06 25.2 0.0 1.7e-05 24.3 0.0 1.5 1 1 0 1 1 1 1 Kinase-like RIO1 PF01163.22 ORF121025 - 0.00011 21.8 0.5 0.0002 21.0 0.5 1.4 1 0 0 1 1 1 1 RIO1 family DUF4447 PF14590.6 ORF121025 - 0.035 13.9 1.3 0.56 10.0 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4447) Pkinase_fungal PF17667.1 ORF121025 - 0.044 12.6 0.1 0.065 12.0 0.1 1.4 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF121025 - 0.15 12.0 0.1 0.42 10.5 0.1 1.7 1 1 0 1 1 1 0 Phosphotransferase enzyme family GATase PF00117.28 ORF117810 - 6.1e-51 172.9 0.0 1.2e-50 172.0 0.0 1.4 2 0 0 2 2 2 1 Glutamine amidotransferase class-I CPSase_sm_chain PF00988.22 ORF117810 - 8.1e-38 129.1 0.0 1.5e-37 128.3 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain Peptidase_C26 PF07722.13 ORF117810 - 7e-08 32.5 0.1 3.2e-06 27.0 0.1 2.3 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 ORF117810 - 0.0033 17.2 0.0 0.0074 16.1 0.0 1.5 1 1 0 1 1 1 1 DJ-1/PfpI family DUF4472 PF14739.6 ORF11594 - 0.13 13.0 2.2 0.43 11.3 0.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4472) APG6_N PF17675.1 ORF11594 - 0.5 10.9 3.9 1.3 9.6 3.8 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region TPR_MLP1_2 PF07926.12 ORF11594 - 0.74 9.9 4.9 0.46 10.6 2.7 1.8 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein cNMP_binding PF00027.29 ORF115583 - 6.7e-33 112.6 0.0 3.6e-19 68.6 0.0 3.2 3 0 0 3 3 3 3 Cyclic nucleotide-binding domain Phage_int_SAM_5 PF13102.6 ORF115583 - 0.0029 17.9 0.6 0.01 16.2 0.6 1.9 1 0 0 1 1 1 1 Phage integrase SAM-like domain Tox-REase-9 PF15650.6 ORF115583 - 0.013 15.8 1.3 0.18 12.1 0.0 2.4 2 0 0 2 2 2 0 Restriction endonuclease fold toxin 9 EphA2_TM PF14575.6 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.0068 17.3 0.4 0.032 15.1 0.0 2.3 3 0 0 3 3 3 1 Ephrin type-A receptor 2 transmembrane domain SLATT_6 PF18169.1 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.01 15.4 0.2 0.022 14.4 0.2 1.5 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 DUF5385 PF17359.2 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.025 14.2 0.5 0.042 13.4 0.2 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5385) ECSCR PF15820.5 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.032 14.0 1.8 0.053 13.4 0.1 2.1 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator SLR1-BP PF07333.12 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.033 14.6 2.3 0.068 13.6 2.3 1.5 1 0 0 1 1 1 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) OSTbeta PF15048.6 NODE_18153_length_1038_cov_315.913260_g13831_i0forward_frame_1 - 0.12 12.5 0.1 0.34 11.1 0.1 1.7 1 0 0 1 1 1 0 Organic solute transporter subunit beta protein Flavi_NS5 PF00972.20 ORF98240 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF97312 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF96503 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Aconitase_2_N PF06434.13 ORF95866 - 0.075 12.7 0.1 0.12 12.0 0.1 1.4 1 0 0 1 1 1 0 Aconitate hydratase 2 N-terminus RVT_1 PF00078.27 ORF94521 - 1.4e-06 28.0 0.7 3.3e-06 26.8 0.7 1.6 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) Flavi_NS5 PF00972.20 ORF9303 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF91487 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF90253 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Trp_Tyr_perm PF03222.13 ORF89565 - 2.3e-43 148.7 13.4 4.6e-43 147.8 13.4 1.4 1 1 0 1 1 1 1 Tryptophan/tyrosine permease family DUF3493 PF11998.8 ORF89565 - 1.8 8.8 0.0 1.8 8.8 0.0 3.3 4 0 0 4 4 4 0 Low psii accumulation1 / Rep27 Peptidase_M99_C PF17129.4 ORF85234 - 0.53 10.5 0.1 0.53 10.5 0.1 3.3 2 1 0 3 3 3 0 C-terminal domain of metallo-carboxypeptidase Acetyltransf_11 PF13720.6 ORF83312 - 5.8e-29 100.4 0.0 9.7e-29 99.7 0.0 1.4 1 0 0 1 1 1 1 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Hexapep PF00132.24 ORF83312 - 1.3e-25 88.1 21.8 8.2e-09 34.9 0.3 5.5 3 1 2 5 5 5 5 Bacterial transferase hexapeptide (six repeats) FabA PF07977.13 ORF83312 - 8.2e-14 51.4 0.0 1.5e-13 50.5 0.0 1.5 1 0 0 1 1 1 1 FabA-like domain Hexapep_2 PF14602.6 ORF83312 - 0.00079 19.1 14.3 0.0011 18.7 1.3 3.9 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.13 ORF83312 - 1.1 9.6 7.4 1.9 8.8 0.8 2.9 1 1 3 4 4 4 0 Polymer-forming cytoskeletal Peptidase_M99_C PF17129.4 ORF80269 - 0.53 10.5 0.1 0.53 10.5 0.1 3.3 2 1 0 3 3 3 0 C-terminal domain of metallo-carboxypeptidase Flavi_NS5 PF00972.20 ORF7999 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Na_H_Exchanger PF00999.21 ORF76953 - 3.8e-08 32.5 0.3 4.9e-08 32.2 0.3 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Sec16 PF12932.7 ORF76953 - 0.13 12.8 0.0 0.3 11.7 0.0 1.7 1 0 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region Flavi_NS5 PF00972.20 ORF72258 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Glyco_transf_21 PF13506.6 ORF69626 - 0.066 12.7 0.0 0.13 11.7 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 21 Flavi_NS5 PF00972.20 ORF67732 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase EF-hand_6 PF13405.6 ORF67328 - 0.00077 19.2 0.3 3 8.0 0.0 3.4 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF67328 - 0.015 15.7 1.8 0.24 11.9 0.1 3.2 3 1 1 4 4 4 0 EF-hand domain pair Arc_PepC PF06819.11 ORF67328 - 0.14 12.3 0.2 0.52 10.4 0.0 2.1 3 0 0 3 3 3 0 Archaeal Peptidase A24 C-terminal Domain Flavi_NS5 PF00972.20 ORF66021 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF65584 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF65134 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF63341 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF62792 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase SpoU_methylase PF00588.19 ORF55076 - 5.1e-28 98.0 0.0 7.7e-28 97.4 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 ORF55076 - 5.3e-13 49.0 0.0 1.1e-12 48.0 0.0 1.5 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding Flavi_NS5 PF00972.20 ORF54435 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF53210 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF47770 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase GFO_IDH_MocA PF01408.22 ORF47124 - 5.9e-17 62.6 0.3 9.1e-17 62.0 0.3 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold Flavi_NS5 PF00972.20 ORF45156 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF42195 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF36901 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Pkinase PF00069.25 ORF35294 - 2.9e-58 197.3 0.2 3.8e-58 196.9 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF35294 - 2.3e-36 125.4 0.0 2.9e-36 125.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 ORF35294 - 4.7e-05 23.1 0.4 0.13 11.9 0.1 2.6 3 0 0 3 3 3 2 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF35294 - 0.00032 20.1 0.0 0.0015 18.0 0.0 1.9 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF35294 - 0.035 12.9 0.0 0.056 12.2 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase DUF2838 PF10998.8 ORF35294 - 0.072 13.3 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2838) APH PF01636.23 ORF35294 - 0.089 12.7 0.0 1.7 8.5 0.0 2.0 1 1 1 2 2 2 0 Phosphotransferase enzyme family Flavi_NS5 PF00972.20 ORF30616 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF27018 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase NAD_binding_1 PF00175.21 ORF26279 - 5.3e-28 97.8 0.0 9.5e-28 97.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF26279 - 7.9e-27 93.5 0.0 1.3e-26 92.9 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF26279 - 0.00014 22.0 0.0 0.0046 17.1 0.0 2.3 1 1 0 2 2 2 1 Ferric reductase NAD binding domain Peptidase_M99_C PF17129.4 ORF26237 - 0.53 10.5 0.1 0.53 10.5 0.1 3.3 2 1 0 3 3 3 0 C-terminal domain of metallo-carboxypeptidase OAD_gamma PF04277.13 ORF23788 - 0.0094 16.5 1.6 0.017 15.7 0.1 2.1 2 1 0 2 2 2 1 Oxaloacetate decarboxylase, gamma chain DUF4834 PF16118.5 ORF23788 - 0.013 16.4 0.3 0.082 13.9 0.4 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) CD99L2 PF12301.8 ORF23788 - 0.02 15.2 0.7 0.02 15.2 0.7 2.1 1 1 1 2 2 2 0 CD99 antigen like protein 2 Flavi_NS5 PF00972.20 ORF22880 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF1992 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF19343 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Flavi_NS5 PF00972.20 ORF18810 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Pkinase PF00069.25 ORF16515 - 9.8e-49 166.1 0.5 1.7e-26 93.2 1.1 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF16515 - 9.3e-23 80.8 0.1 7.7e-15 54.9 0.1 2.4 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF16515 - 2.9e-12 46.5 0.1 6.3e-06 25.7 0.0 2.2 2 0 0 2 2 2 2 Kinase-like APH PF01636.23 ORF16515 - 0.00027 20.9 0.0 0.00044 20.3 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF16515 - 0.025 13.3 0.0 0.037 12.8 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Kdo PF06293.14 ORF16515 - 0.047 13.0 0.0 0.067 12.5 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF16515 - 0.2 10.6 1.4 0.25 10.3 0.4 1.6 2 0 0 2 2 2 0 Haspin like kinase domain GST_C_2 PF13410.6 ORF15367 - 5.6e-12 45.5 0.6 1.5e-11 44.2 0.6 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF15367 - 7.1e-08 32.6 0.0 2.2e-07 31.0 0.0 1.9 2 1 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF15367 - 3.6e-06 27.1 0.0 6.8e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF15367 - 0.0064 16.7 0.0 0.011 16.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF15367 - 0.072 13.7 0.0 0.13 12.9 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF15367 - 0.088 13.2 0.0 2.5 8.6 0.0 2.4 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain Glutaredoxin PF00462.24 ORF15367 - 0.2 11.9 0.0 0.52 10.6 0.0 1.7 1 0 0 1 1 1 0 Glutaredoxin HPP PF04982.13 ORF15122 - 1.4e-70 235.1 23.7 1.6e-36 125.1 7.2 2.6 3 0 0 3 3 3 2 HPP family FG-GAP_2 PF14312.6 ORF150945 - 8.9e-16 57.9 15.8 7.6e-10 38.9 1.4 2.8 3 0 0 3 3 3 2 FG-GAP repeat RIFIN PF02009.16 ORF150945 - 2.6 7.9 14.2 4.4 7.1 14.2 1.4 1 0 0 1 1 1 0 Rifin TFIIA PF03153.13 ORF150945 - 9.5 6.1 10.1 12 5.7 10.1 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit SOBP PF15279.6 ORF150945 - 9.6 6.7 21.2 13 6.3 21.2 1.1 1 0 0 1 1 1 0 Sine oculis-binding protein Mga PF05043.13 ORF150496 - 0.001 19.6 2.7 0.05 14.2 0.2 2.9 2 1 0 2 2 2 1 Mga helix-turn-helix domain DivIC PF04977.15 ORF150496 - 0.0047 16.7 2.4 0.0047 16.7 2.4 6.6 5 2 2 7 7 6 2 Septum formation initiator HAP1_N PF04849.13 ORF150496 - 0.0054 16.0 10.4 0.0054 16.0 10.4 3.7 2 1 2 4 4 4 2 HAP1 N-terminal conserved region TMF_DNA_bd PF12329.8 ORF150496 - 0.0068 16.4 4.1 0.0068 16.4 4.1 6.7 3 3 4 7 7 5 1 TATA element modulatory factor 1 DNA binding OmpH PF03938.14 ORF150496 - 0.02 15.2 10.4 0.02 15.2 10.4 3.8 2 2 0 3 3 3 0 Outer membrane protein (OmpH-like) Trans_reg_C PF00486.28 ORF150496 - 0.058 13.5 0.0 0.42 10.7 0.0 2.3 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal HTH_53 PF18606.1 ORF150496 - 0.17 11.6 0.0 19 5.0 0.0 2.7 2 0 0 2 2 2 0 Zap helix turn helix N-terminal domain TolA_bind_tri PF16331.5 ORF150496 - 0.29 11.3 27.4 4.8 7.3 1.7 6.4 2 1 4 6 6 6 0 TolA binding protein trimerisation DASH_Hsk3 PF08227.11 ORF150496 - 1.1 9.7 17.0 0.6 10.5 0.7 5.0 5 0 0 5 5 5 0 DASH complex subunit Hsk3 like UPF0242 PF06785.11 ORF150496 - 1.1 9.3 61.6 0.24 11.5 18.8 3.7 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus Syntaxin-6_N PF09177.11 ORF150496 - 1.1 9.8 27.0 0.062 13.9 2.5 4.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal GAS PF13851.6 ORF150496 - 1.2 8.4 64.9 0.11 11.8 22.1 3.9 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding NPV_P10 PF05531.12 ORF150496 - 1.3 9.5 25.7 4.8 7.7 5.2 5.1 2 1 2 4 4 4 0 Nucleopolyhedrovirus P10 protein Taxilin PF09728.9 ORF150496 - 1.7 7.7 62.9 1.3e+02 1.5 62.9 3.0 1 1 0 1 1 1 0 Myosin-like coiled-coil protein Sec34 PF04136.15 ORF150496 - 2.5 8.0 26.6 1 9.2 1.1 3.6 3 0 0 3 3 3 0 Sec34-like family Atg14 PF10186.9 ORF150496 - 4 6.4 49.4 1.5 7.9 19.6 3.4 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 CorA PF01544.18 ORF150496 - 9.3 5.5 15.5 9 5.5 8.6 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein H-kinase_dim PF02895.14 ORF150496 - 9.6 6.7 13.0 4.3 7.8 1.0 4.3 1 1 2 3 3 3 0 Signal transducing histidine kinase, homodimeric domain VCH_CASS14 PF18315.1 ORF149398 - 0.023 14.7 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 Integron cassette protein VCH_CASS1 chain Cep57_MT_bd PF06657.13 ORF149398 - 0.1 13.1 0.1 22 5.6 0.0 2.6 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Flavi_NS5 PF00972.20 ORF146414 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase CD34_antigen PF06365.12 ORF14442 - 0.022 14.3 0.0 0.038 13.6 0.0 1.3 1 0 0 1 1 1 0 CD34/Podocalyxin family DUF4690 PF15756.5 ORF14442 - 0.053 14.1 0.3 0.35 11.5 0.0 2.3 2 0 0 2 2 2 0 Small Novel Rich in Cartilage DUF4728 PF15860.5 ORF14442 - 2.1 9.0 4.6 5.8 7.7 0.5 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4728) KAR9 PF08580.10 ORF143277 - 4 5.9 16.4 5.2 5.5 16.4 1.2 1 0 0 1 1 1 0 Yeast cortical protein KAR9 HTH_19 PF12844.7 ORF14198 - 0.081 13.0 1.7 0.27 11.3 1.7 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain PTPlike_phytase PF14566.6 ORF14198 - 0.31 11.1 5.2 0.54 10.4 5.2 1.4 1 0 0 1 1 1 0 Inositol hexakisphosphate EKAL PF17986.1 ORF14198 - 1.1 9.3 10.0 0.099 12.7 2.9 2.7 3 0 0 3 3 3 0 EMP3-KAHRP-like N-terminal domain DUF4407 PF14362.6 ORF14198 - 9 5.5 7.3 15 4.8 7.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) PRANC PF09372.10 ORF13973 - 0.0012 19.1 0.8 0.03 14.6 0.3 2.7 2 0 0 2 2 2 1 PRANC domain MIP PF00230.20 ORF138269 - 3.9e-28 98.7 7.8 3.9e-28 98.7 7.8 1.5 1 1 0 1 1 1 1 Major intrinsic protein Fip1 PF05182.13 ORF136826 - 2.6e-16 58.8 1.3 5.4e-16 57.8 1.3 1.5 1 0 0 1 1 1 1 Fip1 motif Flavi_NS5 PF00972.20 ORF135647 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase DUF4618 PF15397.6 ORF135033 - 0.015 14.7 3.1 0.015 14.7 3.1 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4618) DUF1664 PF07889.12 ORF135033 - 0.42 10.7 9.8 0.56 10.2 2.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) FapA PF03961.13 ORF135033 - 0.53 8.8 12.5 0.94 8.0 5.7 2.3 2 0 0 2 2 2 0 Flagellar Assembly Protein A FlaC_arch PF05377.11 ORF135033 - 0.88 10.0 16.1 0.31 11.5 1.5 4.1 4 1 1 5 5 4 0 Flagella accessory protein C (FlaC) DUF4407 PF14362.6 ORF135033 - 0.99 8.7 16.2 0.032 13.6 1.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) CTP_transf_like PF01467.26 ORF135033 - 2.1 8.5 8.1 35 4.6 8.1 2.6 1 1 0 1 1 1 0 Cytidylyltransferase-like DUF4140 PF13600.6 ORF135033 - 2.3 8.7 15.1 0.85 10.1 0.2 3.6 3 1 1 4 4 4 0 N-terminal domain of unknown function (DUF4140) ATG16 PF08614.11 ORF135033 - 2.5 8.3 17.7 0.49 10.6 7.4 2.4 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Prefoldin_2 PF01920.20 ORF135033 - 3.3 7.7 23.5 6.1 6.8 0.8 3.9 4 0 0 4 4 4 0 Prefoldin subunit FlxA PF14282.6 ORF135033 - 3.5 7.7 11.6 4.7 7.3 2.3 2.6 2 0 0 2 2 2 0 FlxA-like protein KxDL PF10241.9 ORF135033 - 4.4 7.7 12.4 6.6 7.1 0.3 4.1 3 1 1 4 4 4 0 Uncharacterized conserved protein CdvA PF18822.1 ORF135033 - 6.8 6.5 22.2 0.25 11.1 7.1 3.1 3 0 0 3 3 3 0 CdvA-like coiled-coil domain Swi5 PF07061.11 ORF135033 - 8.5 6.5 16.1 0.25 11.4 0.4 3.6 3 1 1 4 4 4 0 Swi5 Flavi_NS5 PF00972.20 ORF132278 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase P2X_receptor PF00864.19 ORF129021 - 1e-37 130.1 0.5 1.4e-37 129.7 0.5 1.2 1 0 0 1 1 1 1 ATP P2X receptor Nodulin_late PF07127.11 ORF129021 - 0.064 13.6 2.9 0.14 12.5 2.9 1.6 1 0 0 1 1 1 0 Late nodulin protein PAP2_C PF14360.6 ORF125116 - 2.1e-17 63.4 7.0 2.1e-17 63.4 7.0 1.9 2 0 0 2 2 2 1 PAP2 superfamily C-terminal PAP2 PF01569.21 ORF125116 - 2e-08 34.1 2.2 2e-08 34.1 2.2 2.1 1 1 1 2 2 2 1 PAP2 superfamily DUF4386 PF14329.6 ORF125116 - 0.052 13.4 6.1 0.051 13.4 1.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4386) PAP2_3 PF14378.6 ORF125116 - 2.3 7.8 14.6 4.7 6.8 14.6 1.5 1 1 0 1 1 1 0 PAP2 superfamily Auxin_repressed PF05564.12 ORF12496 - 0.16 12.7 1.9 0.9 10.2 0.0 2.6 2 2 0 2 2 2 0 Dormancy/auxin associated protein Peptidase_C48 PF02902.19 ORF121650 - 1.9e-19 70.4 0.0 5e-19 69.0 0.0 1.6 1 1 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Ca_hom_mod PF14798.6 ORF120206 - 0.0093 15.1 0.5 0.19 10.8 0.0 2.1 2 0 0 2 2 2 2 Calcium homeostasis modulator Flavi_NS5 PF00972.20 ORF112362 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase Pkinase PF00069.25 ORF109837 - 2.2e-60 204.3 0.2 2.7e-60 204.0 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF109837 - 1e-18 67.5 0.0 1.5e-18 67.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF109837 - 5.8e-09 36.2 0.0 4.7e-06 26.7 0.0 2.2 1 1 0 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF109837 - 8.7e-05 22.2 0.5 0.00018 21.2 0.5 1.5 1 1 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF109837 - 0.00025 19.9 0.1 0.0059 15.4 0.0 2.2 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 ORF109837 - 0.0019 17.6 0.1 0.0033 16.8 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF109837 - 0.0087 15.7 0.2 0.018 14.6 0.2 1.5 1 0 0 1 1 1 1 Choline/ethanolamine kinase DUF5072 PF16807.5 ORF109837 - 0.022 14.8 0.3 1.4 9.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5072) FTA2 PF13095.6 ORF109837 - 0.072 12.7 0.2 0.21 11.2 0.1 1.8 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF109837 - 0.081 12.2 0.0 0.14 11.4 0.0 1.4 1 0 0 1 1 1 0 Kinase-like Flavi_NS5 PF00972.20 ORF106627 - 0.11 10.6 7.5 0.64 8.1 0.0 2.6 2 1 1 3 3 3 0 Flavivirus RNA-directed RNA polymerase PPIP5K2_N PF18086.1 ORF102609 - 0.37 11.0 0.9 20 5.4 0.1 3.3 3 0 0 3 3 3 0 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain RRM_1 PF00076.22 NODE_18185_length_1037_cov_466.767465_g13855_i0reverse_frame_3 - 1.6e-08 34.2 0.0 2.7e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 NODE_18185_length_1037_cov_466.767465_g13855_i0reverse_frame_3 - 0.023 14.3 0.0 0.034 13.7 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCCH_2 PF14608.6 NODE_18185_length_1037_cov_466.767465_g13855_i0reverse_frame_3 - 0.35 11.4 9.3 0.29 11.7 3.6 2.5 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger DUF5576 PF17739.1 NODE_18185_length_1037_cov_466.767465_g13855_i0forward_frame_3 - 0.09 12.9 1.3 0.41 10.8 0.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5576) PGK PF00162.19 ORF97381 - 2e-113 379.2 1.9 2.3e-113 379.0 1.9 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF97381 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) Ldh_1_C PF02866.18 ORF96211 - 5.9e-33 114.2 0.0 9.5e-33 113.5 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 ORF96211 - 1.4e-29 103.0 0.0 2.1e-29 102.4 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain AAA_12 PF13087.6 ORF87111 - 2.5e-29 102.4 0.0 3.8e-29 101.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF87111 - 0.00087 19.1 0.2 0.0019 18.1 0.2 1.5 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 ORF87111 - 0.0032 17.3 0.0 0.024 14.4 0.0 2.3 2 0 0 2 2 2 1 UvrD-like helicase C-terminal domain PGK PF00162.19 ORF81679 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF81679 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) Exo_endo_phos PF03372.23 ORF8040 - 4.8e-21 75.3 0.0 6.6e-21 74.9 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF8040 - 1.7e-06 27.9 0.6 1.7e-06 27.9 0.6 1.9 2 0 0 2 2 2 1 Endonuclease-reverse transcriptase DUF4595 PF15283.6 ORF8040 - 0.027 14.5 0.1 0.057 13.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4595) with porin-like fold Pkinase PF00069.25 ORF76556 - 5.3e-46 157.1 0.1 6.3e-46 156.9 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF76556 - 1.5e-17 63.7 0.0 1.5e-16 60.5 0.0 2.0 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF76556 - 3.2e-05 23.4 0.0 6.9e-05 22.3 0.0 1.6 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF76556 - 0.00035 19.5 0.1 0.00065 18.6 0.1 1.4 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF76556 - 0.00049 19.1 0.5 0.00071 18.6 0.3 1.5 1 1 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF76556 - 0.0032 17.4 0.2 0.0079 16.1 0.4 1.4 2 0 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF76556 - 0.011 15.1 0.0 0.018 14.4 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family PGK PF00162.19 ORF71995 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF71995 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) PGK PF00162.19 ORF70203 - 2.1e-113 379.1 1.9 2.4e-113 378.9 1.9 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF70203 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) VWA PF00092.28 ORF53472 - 0.00033 21.0 0.0 0.00052 20.3 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain Peptidase_C26 PF07722.13 ORF53375 - 9.5e-20 71.3 0.0 4.3e-19 69.1 0.0 2.0 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF53375 - 7.6e-09 35.6 0.0 2.4e-08 34.0 0.0 1.8 2 1 0 2 2 2 1 Glutamine amidotransferase class-I PPV_E2_N PF00508.17 ORF53375 - 0.029 13.7 0.6 0.057 12.7 0.6 1.5 1 0 0 1 1 1 0 E2 (early) protein, N terminal Peptidase_C97 PF05903.14 ORF52098 - 0.011 15.6 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 PPPDE putative peptidase domain Exo_endo_phos PF03372.23 ORF42958 - 4.9e-21 75.3 0.0 6.6e-21 74.9 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF42958 - 7.1e-07 29.1 0.6 1.7e-06 27.9 0.6 1.7 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase DUF4595 PF15283.6 ORF42958 - 0.026 14.6 0.1 0.057 13.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4595) with porin-like fold PGK PF00162.19 ORF4267 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF4267 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) SNARE PF05739.19 ORF40043 - 1.9e-13 50.1 3.2 5.1e-13 48.8 0.7 2.5 2 0 0 2 2 2 1 SNARE domain Syntaxin PF00804.25 ORF40043 - 0.019 14.6 0.8 0.019 14.6 0.8 2.5 1 1 0 2 2 2 0 Syntaxin FAM180 PF15173.6 ORF40043 - 0.74 9.8 5.6 3.5 7.6 0.1 2.7 2 1 1 3 3 3 0 FAM180 family PBP1_TM PF14812.6 ORF40043 - 1.1 9.7 10.0 1.2 9.5 0.5 3.3 3 0 0 3 3 3 0 Transmembrane domain of transglycosylase PBP1 at N-terminal THUMP PF02926.17 ORF33654 - 4.1e-05 23.7 0.7 0.00015 21.9 0.1 2.2 2 1 0 2 2 2 1 THUMP domain Pkinase PF00069.25 ORF33506 - 2.9e-62 210.4 0.7 3.8e-62 210.0 0.7 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33506 - 4e-20 72.2 0.0 7.9e-20 71.2 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF33506 - 4.7e-08 33.2 0.0 9.5e-06 25.7 0.1 2.2 1 1 0 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF33506 - 2.4e-05 24.0 0.6 5.4e-05 22.9 0.6 1.5 1 1 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF33506 - 0.00012 21.1 0.1 0.0026 16.6 0.0 2.2 2 0 0 2 2 2 1 Fungal protein kinase Choline_kinase PF01633.20 ORF33506 - 0.018 14.7 0.2 0.057 13.0 0.1 1.7 1 1 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 ORF33506 - 0.044 13.1 0.7 0.13 11.6 0.6 1.8 1 1 1 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF33506 - 0.045 13.0 0.0 0.091 12.1 0.0 1.5 1 0 0 1 1 1 0 Kinase-like FTA2 PF13095.6 ORF33506 - 0.085 12.5 0.2 0.4 10.3 0.1 2.1 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 PP2C_C PF07830.13 ORF32383 - 0.057 13.9 3.3 1.3 9.5 0.2 3.2 3 0 0 3 3 3 0 Protein serine/threonine phosphatase 2C, C-terminal domain MFS_1 PF07690.16 ORF32119 - 1.7e-25 89.8 23.3 4.4e-22 78.5 14.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 ORF32119 - 0.00015 20.3 8.6 0.077 11.4 5.0 2.1 2 0 0 2 2 2 2 Transmembrane secretion effector WBP-1 PF11669.8 ORF32119 - 0.068 13.8 0.4 3.1 8.5 0.1 2.7 2 1 0 2 2 2 0 WW domain-binding protein 1 Cyclin PF08613.11 ORF31454 - 2.7e-16 60.3 0.1 2.7e-16 60.3 0.1 2.8 2 1 0 2 2 2 1 Cyclin Cyclin_N PF00134.23 ORF31454 - 0.0081 15.9 0.0 0.022 14.5 0.0 1.7 1 0 0 1 1 1 1 Cyclin, N-terminal domain MORN PF02493.20 ORF27682 - 9.9e-22 75.5 26.4 0.00052 19.7 0.1 9.0 9 0 0 9 9 9 8 MORN repeat Colicin_E5 PF12106.8 ORF25987 - 0.053 13.8 0.5 0.053 13.8 0.5 3.0 3 0 0 3 3 3 0 Colicin E5 ribonuclease domain DUF3659 PF12396.8 ORF25987 - 0.058 13.3 0.5 0.058 13.3 0.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) PGK PF00162.19 ORF150012 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF150012 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) GFO_IDH_MocA PF01408.22 ORF148450 - 5.8e-28 98.1 0.0 8.8e-28 97.6 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 ORF148450 - 2.6e-16 59.7 0.0 4.6e-16 58.9 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain NAD_binding_3 PF03447.16 ORF148450 - 1.4e-05 25.7 0.0 2.7e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain PBECR3 PF18812.1 ORF148450 - 0.041 13.8 0.0 0.098 12.6 0.0 1.6 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 Response_reg PF00072.24 ORF148450 - 0.16 12.1 0.0 0.32 11.2 0.0 1.5 1 0 0 1 1 1 0 Response regulator receiver domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks48.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks48.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks48.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks48.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:25:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PGK PF00162.19 ORF141274 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF141274 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) Nuc_sug_transp PF04142.15 ORF138983 - 3.3e-75 253.2 4.8 3.8e-75 253.0 4.8 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter UAA PF08449.11 ORF138983 - 2.3e-07 30.3 7.8 3.4e-07 29.8 7.8 1.2 1 0 0 1 1 1 1 UAA transporter family ATP19 PF11022.8 ORF138983 - 0.22 11.9 2.1 0.94 9.9 0.0 2.7 3 0 0 3 3 3 0 ATP synthase subunit K EamA PF00892.20 ORF138983 - 0.34 11.1 22.5 0.64 10.2 10.6 3.0 3 1 0 3 3 3 0 EamA-like transporter family STT3 PF02516.14 ORF138983 - 0.79 8.6 9.7 1.5 7.6 0.5 2.1 2 0 0 2 2 2 0 Oligosaccharyl transferase STT3 subunit ODC_AZ PF02100.17 ORF128928 - 0.012 15.6 0.2 0.026 14.5 0.2 1.5 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme DUF4200 PF13863.6 ORF126082 - 1.4e-06 28.6 35.1 1.4e-06 28.6 35.1 2.9 3 1 0 3 3 3 1 Domain of unknown function (DUF4200) SKA2 PF16740.5 ORF126082 - 0.018 14.8 10.5 0.018 14.8 10.5 3.6 2 1 2 4 4 4 0 Spindle and kinetochore-associated protein 2 Phycobilisome PF00502.19 ORF126082 - 0.03 14.2 1.1 0.03 14.2 1.1 3.4 2 2 1 3 3 3 0 Phycobilisome protein DUF1465 PF07323.12 ORF126082 - 0.031 14.1 0.7 0.031 14.1 0.7 3.3 1 1 1 3 3 3 0 Protein of unknown function (DUF1465) Lant_dehydr_C PF14028.6 ORF126082 - 2.1 7.8 6.7 3.5 7.1 0.6 2.3 2 0 0 2 2 2 0 Lantibiotic biosynthesis dehydratase C-term Pox_A_type_inc PF04508.12 ORF126082 - 2.3 8.2 7.6 19 5.3 3.7 3.7 2 1 1 3 3 3 0 Viral A-type inclusion protein repeat AATF-Che1 PF13339.6 ORF126082 - 5.1 7.8 32.5 2.1 9.0 8.1 2.4 2 0 0 2 2 2 0 Apoptosis antagonizing transcription factor ERM PF00769.19 ORF126082 - 5.7 6.7 47.5 13 5.5 14.7 2.2 1 1 1 2 2 2 0 Ezrin/radixin/moesin family Form_Nir_trans PF01226.17 ORF124300 - 8.3e-70 234.8 20.9 1.2e-69 234.3 20.9 1.2 1 0 0 1 1 1 1 Formate/nitrite transporter EF-hand_7 PF13499.6 ORF118402 - 9.5e-06 26.0 0.5 2.5e-05 24.6 0.5 1.7 1 0 0 1 1 1 1 EF-hand domain pair ubiquitin PF00240.23 ORF118402 - 5.9e-05 22.7 0.0 0.00011 21.8 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family EF-hand_6 PF13405.6 ORF118402 - 0.0036 17.1 0.2 0.069 13.1 0.0 2.6 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 ORF118402 - 0.0042 16.5 0.4 0.013 15.0 0.0 2.0 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF118402 - 0.0089 15.5 0.4 0.13 11.9 0.0 2.5 2 0 0 2 2 2 1 EF hand Clathrin-link PF09268.10 ORF118402 - 0.13 11.6 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 Clathrin, heavy-chain linker Rad60-SLD PF11976.8 ORF118402 - 0.17 11.8 0.0 0.33 10.8 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like ABC_tran PF00005.27 ORF11796 - 6.4e-28 98.0 0.1 1.5e-27 96.8 0.1 1.6 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF11796 - 1.1e-08 34.8 3.6 1.9e-06 27.5 0.4 2.9 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain ABC_membrane PF00664.23 ORF11796 - 8.8e-05 22.3 1.1 0.00015 21.5 1.1 1.5 1 0 0 1 1 1 1 ABC transporter transmembrane region AAA_21 PF13304.6 ORF11796 - 0.0037 17.1 0.5 1.8 8.3 0.3 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF11796 - 0.01 15.6 0.1 0.53 10.1 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain DUF2087 PF09860.9 ORF11796 - 0.014 15.5 0.0 0.041 14.0 0.0 1.8 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) DUF505 PF04458.12 ORF11796 - 0.041 12.3 0.0 0.058 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF505) MMR_HSR1 PF01926.23 ORF11796 - 0.06 13.4 1.5 0.12 12.5 0.6 2.2 2 1 0 2 2 2 0 50S ribosome-binding GTPase PP-binding PF00550.25 ORF111902 - 3.8e-05 24.0 0.1 7.1e-05 23.1 0.1 1.5 1 0 0 1 1 1 1 Phosphopantetheine attachment site Acetyltransf_1 PF00583.25 ORF111902 - 0.00032 20.9 0.0 0.0005 20.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family MSP PF01716.18 ORF11077 - 6.9e-83 277.5 0.3 8.2e-83 277.3 0.3 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide CotJB PF12652.7 ORF107424 - 0.21 11.8 3.8 0.16 12.2 0.5 2.5 2 0 0 2 2 2 0 CotJB protein Bax1-I PF01027.20 ORF104411 - 7e-28 97.9 35.1 1.1e-27 97.3 35.1 1.3 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF2070 PF09843.9 ORF104411 - 2.8 6.1 15.9 4.4 5.5 15.9 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Pkinase PF00069.25 ORF103478 - 1.7e-62 211.2 0.8 2.2e-62 210.8 0.8 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF103478 - 4e-20 72.2 0.0 7.9e-20 71.2 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF103478 - 4.7e-08 33.3 0.0 9.5e-06 25.7 0.1 2.2 1 1 0 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF103478 - 2.3e-05 24.1 0.6 5.4e-05 22.9 0.6 1.6 1 1 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 ORF103478 - 0.00011 21.1 0.1 0.0026 16.6 0.0 2.2 2 0 0 2 2 2 1 Fungal protein kinase Choline_kinase PF01633.20 ORF103478 - 0.016 14.8 0.2 0.057 13.0 0.1 1.8 1 1 0 1 1 1 0 Choline/ethanolamine kinase Kdo PF06293.14 ORF103478 - 0.043 13.2 0.7 0.13 11.6 0.6 1.8 1 1 1 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF103478 - 0.045 13.1 0.0 0.091 12.1 0.0 1.5 1 0 0 1 1 1 0 Kinase-like PGK PF00162.19 ORF101100 - 6.6e-114 380.8 1.6 7.4e-114 380.6 1.6 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF101100 - 0.12 12.1 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) EphA2_TM PF14575.6 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 0.013 16.3 0.0 0.029 15.2 0.0 1.6 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain FCSD-flav_bind PF09242.11 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 0.14 12.6 0.2 1.9 8.9 0.0 2.8 2 1 1 3 3 3 0 Flavocytochrome c sulphide dehydrogenase, flavin-binding O-antigen_lig PF13425.6 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 0.47 9.2 7.2 0.73 8.6 7.2 1.4 1 1 0 1 1 1 0 O-antigen ligase like membrane protein Ly49 PF08391.10 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 1.5 9.2 10.2 0.13 12.6 2.2 2.8 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region DUF1189 PF06691.11 NODE_18389_length_1032_cov_83.282849_g14016_i0reverse_frame_1 - 3.9 7.0 12.6 1.2 8.6 4.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1189) MDM31_MDM32 PF08118.11 NODE_18386_length_1032_cov_108.569709_g14013_i0forward_frame_1 - 0.18 10.4 0.4 0.24 10.0 0.4 1.1 1 0 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins baeRF_family7 PF18849.1 NODE_18324_length_1033_cov_656.347695_g13967_i0reverse_frame_3 - 0.01 16.0 0.0 0.021 15.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 7 zf-CSL PF05207.13 NODE_18324_length_1033_cov_656.347695_g13967_i0reverse_frame_3 - 0.058 13.1 0.0 0.17 11.6 0.0 1.8 1 0 0 1 1 1 0 CSL zinc finger PABP PF00658.18 ORF97883 - 1.5e-24 85.9 0.3 2.3e-24 85.3 0.3 1.3 1 0 0 1 1 1 1 Poly-adenylate binding protein, unique domain RRM_1 PF00076.22 ORF97883 - 1e-18 66.9 0.0 1.6e-18 66.3 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MRI PF15325.6 ORF96807 - 0.0086 17.1 1.3 0.019 16.0 1.3 1.6 1 0 0 1 1 1 1 Modulator of retrovirus infection Cyclin PF08613.11 ORF94611 - 2.8e-12 47.3 0.2 3.6e-12 46.9 0.2 1.4 1 1 0 1 1 1 1 Cyclin PRP1_N PF06424.12 ORF94611 - 0.021 15.2 1.7 0.036 14.5 1.7 1.3 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal ABM PF03992.16 ORF91099 - 8.8e-21 73.8 0.5 2.7e-11 43.4 0.3 2.7 2 1 0 2 2 2 2 Antibiotic biosynthesis monooxygenase SOR PF07682.11 ORF91099 - 0.012 14.5 0.0 1.7 7.5 0.0 2.1 2 0 0 2 2 2 0 Sulphur oxygenase reductase Yip1 PF04893.17 ORF85501 - 1.1e-06 28.4 9.9 1.6e-06 27.9 9.9 1.3 1 0 0 1 1 1 1 Yip1 domain TMEM144 PF07857.12 ORF79510 - 1.7e-49 168.6 0.3 2.7e-49 168.0 0.3 1.3 1 1 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Sugar_transport PF06800.12 ORF79510 - 9.4e-05 21.9 5.0 0.00022 20.7 5.0 1.6 1 0 0 1 1 1 1 Sugar transport protein DUF4149 PF13664.6 ORF79510 - 0.17 12.3 3.9 0.26 11.6 0.2 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4149) HhH-GPD PF00730.25 ORF74936 - 2.1e-16 60.3 0.0 3.3e-16 59.7 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein NUDIX_4 PF14815.6 ORF74936 - 1.2e-14 54.2 0.0 2.8e-14 53.0 0.0 1.7 1 0 0 1 1 1 1 NUDIX domain HHH PF00633.23 ORF74936 - 7.8e-10 38.1 0.0 1.8e-09 36.9 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 ORF74936 - 0.00082 19.9 0.0 0.0054 17.3 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 ORF74936 - 0.0021 18.1 0.0 3.2 7.9 0.0 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif NUDIX PF00293.28 ORF74936 - 0.0067 16.5 0.0 0.01 15.8 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain Whib PF02467.16 ORF74936 - 0.015 15.9 0.4 0.045 14.4 0.4 1.8 1 0 0 1 1 1 0 Transcription factor WhiB Cdd1 PF11731.8 ORF74936 - 0.051 13.8 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus EndIII_4Fe-2S PF10576.9 ORF74936 - 3.3 8.2 10.1 6.1 7.3 10.1 1.5 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III CitG PF01874.16 ORF72937 - 6.4e-84 281.9 0.0 7.6e-84 281.7 0.0 1.1 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase Transferase PF02458.15 ORF682 - 0.0033 16.1 0.0 0.13 10.8 0.0 2.2 2 0 0 2 2 2 2 Transferase family Condensation PF00668.20 ORF682 - 0.24 10.0 0.2 0.38 9.4 0.2 1.2 1 0 0 1 1 1 0 Condensation domain Syntaxin-18_N PF10496.9 ORF66880 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus S1 PF00575.23 ORF66340 - 2.6e-17 62.9 8.2 1.2e-06 28.7 0.4 4.2 4 0 0 4 4 4 3 S1 RNA binding domain PCB_OB PF17092.5 ORF66340 - 0.018 15.8 0.8 0.018 15.8 0.8 2.7 3 0 0 3 3 3 0 Penicillin-binding protein OB-like domain La_HTH_kDCL PF18177.1 ORF66340 - 0.025 14.9 0.0 0.068 13.5 0.0 1.7 1 0 0 1 1 1 0 La HTH in kinetoplastid DICER domain CSD PF00313.22 ORF66340 - 0.057 13.3 0.1 18 5.2 0.0 2.6 2 0 0 2 2 2 0 'Cold-shock' DNA-binding domain MAM33 PF02330.16 ORF64004 - 1.1e-14 55.0 0.2 1.1e-14 55.0 0.2 1.9 2 1 0 2 2 2 1 Mitochondrial glycoprotein Transglut_core2 PF13369.6 ORF62613 - 3.1e-34 117.8 0.0 4.8e-34 117.2 0.0 1.3 1 0 0 1 1 1 1 Transglutaminase-like superfamily Transglut_core PF01841.19 ORF62613 - 0.055 13.9 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 Transglutaminase-like superfamily Epimerase PF01370.21 ORF62536 - 1.8e-24 86.6 0.0 2.8e-24 85.9 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF62536 - 5.4e-22 78.1 0.0 7.4e-22 77.6 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 ORF62536 - 5e-16 59.1 0.0 7e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF62536 - 1.2e-11 44.6 0.0 2e-11 43.9 0.0 1.4 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase NmrA PF05368.13 ORF62536 - 9.1e-10 38.5 0.0 1.7e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family NAD_binding_4 PF07993.12 ORF62536 - 3.1e-08 33.1 0.0 8.6e-08 31.7 0.0 1.7 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF62536 - 2.3e-07 30.2 0.0 4.4e-07 29.3 0.0 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF62536 - 9.1e-06 25.7 0.0 6.3e-05 23.0 0.0 2.0 1 1 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF62536 - 0.02 15.2 0.0 0.061 13.6 0.0 1.9 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Cullin PF00888.22 ORF55276 - 6.9e-79 266.1 10.2 6.9e-79 266.1 10.2 1.7 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF55276 - 2.1e-24 85.3 3.3 1.6e-23 82.5 2.2 2.5 2 0 0 2 2 2 1 Cullin protein neddylation domain Syntaxin-18_N PF10496.9 ORF54747 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus Mga PF05043.13 ORF5470 - 0.0013 19.3 3.0 0.05 14.2 0.2 2.9 2 1 0 2 2 2 1 Mga helix-turn-helix domain DUF812 PF05667.11 ORF5470 - 0.004 16.1 24.3 0.004 16.1 24.3 2.9 1 1 2 3 3 2 2 Protein of unknown function (DUF812) DivIC PF04977.15 ORF5470 - 0.0047 16.7 2.4 0.0047 16.7 2.4 6.6 4 3 3 7 7 6 2 Septum formation initiator TMF_DNA_bd PF12329.8 ORF5470 - 0.0068 16.4 4.1 0.0068 16.4 4.1 6.7 3 3 4 7 7 5 1 TATA element modulatory factor 1 DNA binding HAP1_N PF04849.13 ORF5470 - 0.0073 15.5 11.1 0.0073 15.5 11.1 3.7 2 1 2 4 4 4 2 HAP1 N-terminal conserved region OmpH PF03938.14 ORF5470 - 0.018 15.4 10.2 0.018 15.4 10.2 3.9 2 2 1 3 3 3 0 Outer membrane protein (OmpH-like) Trans_reg_C PF00486.28 ORF5470 - 0.057 13.5 0.0 0.42 10.7 0.0 2.4 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal HTH_53 PF18606.1 ORF5470 - 0.17 11.6 0.0 18 5.1 0.0 2.7 2 0 0 2 2 2 0 Zap helix turn helix N-terminal domain TolA_bind_tri PF16331.5 ORF5470 - 0.23 11.5 27.8 7.9 6.6 2.3 6.4 2 1 4 6 6 6 0 TolA binding protein trimerisation Syntaxin-6_N PF09177.11 ORF5470 - 0.65 10.6 26.9 0.14 12.7 3.9 4.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal PhageMin_Tail PF10145.9 ORF5470 - 0.85 9.4 9.7 18 5.1 5.7 3.1 2 1 0 2 2 2 0 Phage-related minor tail protein UPF0242 PF06785.11 ORF5470 - 0.97 9.5 62.3 0.15 12.1 19.6 3.4 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus DASH_Hsk3 PF08227.11 ORF5470 - 1.1 9.7 17.0 0.6 10.5 0.7 5.0 5 0 0 5 5 5 0 DASH complex subunit Hsk3 like NPV_P10 PF05531.12 ORF5470 - 1.1 9.8 26.2 4.8 7.7 5.0 5.1 1 1 3 4 4 4 0 Nucleopolyhedrovirus P10 protein GAS PF13851.6 ORF5470 - 1.7 7.9 66.2 0.21 10.9 22.8 3.9 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding Sec34 PF04136.15 ORF5470 - 3.2 7.6 26.2 1 9.2 1.1 3.7 3 0 0 3 3 3 0 Sec34-like family Taxilin PF09728.9 ORF5470 - 3.5 6.7 63.3 2.8e+02 0.5 63.4 3.0 1 1 0 1 1 1 0 Myosin-like coiled-coil protein zf-C2HC_2 PF13913.6 ORF53742 - 1.7e-07 30.9 0.1 2.7e-07 30.3 0.1 1.3 1 0 0 1 1 1 1 zinc-finger of a C2HC-type DUF4371 PF14291.6 ORF52399 - 0.47 10.1 5.8 2.2 7.9 5.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4371) NLRC4_HD PF17889.1 ORF52399 - 1.3 9.4 6.8 0.91 9.9 0.7 3.1 3 0 0 3 3 3 0 NLRC4 helical domain DUF1811 PF08838.10 ORF52399 - 6.6 7.0 7.8 4.8 7.5 1.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1811) FAM176 PF14851.6 ORF52130 - 0.012 15.3 0.0 0.022 14.4 0.0 1.3 1 0 0 1 1 1 0 FAM176 family TMEM154 PF15102.6 ORF52130 - 0.015 15.2 0.0 0.015 15.2 0.0 2.4 2 1 0 2 2 2 0 TMEM154 protein family He_PIG PF05345.12 ORF52130 - 4.2 7.6 12.1 0.096 12.9 2.3 3.3 1 1 1 2 2 2 0 Putative Ig domain Mga PF05043.13 ORF48871 - 0.0013 19.3 3.0 0.05 14.2 0.2 2.9 2 1 0 2 2 2 1 Mga helix-turn-helix domain DUF812 PF05667.11 ORF48871 - 0.004 16.1 24.3 0.004 16.1 24.3 2.9 1 1 2 3 3 2 2 Protein of unknown function (DUF812) DivIC PF04977.15 ORF48871 - 0.0047 16.7 2.4 0.0047 16.7 2.4 6.6 4 3 3 7 7 6 2 Septum formation initiator TMF_DNA_bd PF12329.8 ORF48871 - 0.0068 16.4 4.1 0.0068 16.4 4.1 6.7 3 3 4 7 7 5 1 TATA element modulatory factor 1 DNA binding HAP1_N PF04849.13 ORF48871 - 0.0073 15.5 11.1 0.0073 15.5 11.1 3.7 2 1 2 4 4 4 2 HAP1 N-terminal conserved region OmpH PF03938.14 ORF48871 - 0.018 15.4 10.2 0.018 15.4 10.2 3.9 2 2 1 3 3 3 0 Outer membrane protein (OmpH-like) Trans_reg_C PF00486.28 ORF48871 - 0.057 13.5 0.0 0.42 10.7 0.0 2.4 2 0 0 2 2 2 0 Transcriptional regulatory protein, C terminal HTH_53 PF18606.1 ORF48871 - 0.17 11.6 0.0 18 5.1 0.0 2.7 2 0 0 2 2 2 0 Zap helix turn helix N-terminal domain TolA_bind_tri PF16331.5 ORF48871 - 0.23 11.5 27.8 7.9 6.6 2.3 6.4 2 1 4 6 6 6 0 TolA binding protein trimerisation Syntaxin-6_N PF09177.11 ORF48871 - 0.65 10.6 26.9 0.14 12.7 3.9 4.3 1 1 1 2 2 2 0 Syntaxin 6, N-terminal PhageMin_Tail PF10145.9 ORF48871 - 0.85 9.4 9.7 18 5.1 5.7 3.1 2 1 0 2 2 2 0 Phage-related minor tail protein UPF0242 PF06785.11 ORF48871 - 0.97 9.5 62.3 0.15 12.1 19.6 3.4 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus DASH_Hsk3 PF08227.11 ORF48871 - 1.1 9.7 17.0 0.6 10.5 0.7 5.0 5 0 0 5 5 5 0 DASH complex subunit Hsk3 like NPV_P10 PF05531.12 ORF48871 - 1.1 9.8 26.2 4.8 7.7 5.0 5.1 1 1 3 4 4 4 0 Nucleopolyhedrovirus P10 protein GAS PF13851.6 ORF48871 - 1.7 7.9 66.2 0.21 10.9 22.8 3.9 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding Sec34 PF04136.15 ORF48871 - 3.2 7.6 26.2 1 9.2 1.1 3.7 3 0 0 3 3 3 0 Sec34-like family Taxilin PF09728.9 ORF48871 - 3.5 6.7 63.3 2.8e+02 0.5 63.4 3.0 1 1 0 1 1 1 0 Myosin-like coiled-coil protein Syntaxin-18_N PF10496.9 ORF47882 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus BPD_transp_1 PF00528.22 ORF45056 - 1.3e-12 47.9 14.2 1.3e-12 47.9 14.2 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component PLA1 PF02253.15 ORF44766 - 2.5e-89 299.3 4.1 3.1e-89 299.0 4.1 1.0 1 0 0 1 1 1 1 Phospholipase A1 CCT PF06203.14 ORF3911 - 9.4e-12 44.8 9.8 9.4e-12 44.8 9.8 2.1 2 0 0 2 2 2 1 CCT motif Sec16 PF12932.7 ORF3911 - 0.023 15.3 0.1 0.067 13.8 0.1 1.8 1 0 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region zf-primase PF09329.11 ORF3911 - 0.059 13.2 0.4 0.59 10.0 0.3 2.2 2 0 0 2 2 2 0 Primase zinc finger MRI PF15325.6 ORF37223 - 0.0086 17.1 1.3 0.019 16.0 1.3 1.6 1 0 0 1 1 1 1 Modulator of retrovirus infection Prok-E2_E PF14462.6 ORF33920 - 0.73 9.6 3.1 1.5 8.7 3.1 1.4 1 0 0 1 1 1 0 Prokaryotic E2 family E SH3_3 PF08239.11 ORF3309 - 0.0034 17.6 0.0 0.0066 16.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial SH3 domain SH3_4 PF06347.13 ORF3309 - 0.013 15.3 0.2 0.034 14.0 0.2 1.7 1 0 0 1 1 1 0 Bacterial SH3 domain CMD PF02627.20 ORF3309 - 0.059 13.4 3.9 1 9.4 0.2 2.5 2 0 0 2 2 2 0 Carboxymuconolactone decarboxylase family adh_short PF00106.25 ORF32095 - 7.5e-25 87.5 1.3 1.7e-20 73.3 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF32095 - 3.2e-15 56.3 0.2 1.8e-14 53.9 0.0 1.9 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF32095 - 0.00024 21.0 0.4 0.00043 20.2 0.1 1.5 2 0 0 2 2 2 1 KR domain 3HCDH_N PF02737.18 ORF32095 - 0.071 13.0 0.4 0.12 12.2 0.4 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABM PF03992.16 ORF27091 - 8.8e-21 73.8 0.5 2.7e-11 43.4 0.3 2.7 2 1 0 2 2 2 2 Antibiotic biosynthesis monooxygenase SOR PF07682.11 ORF27091 - 0.012 14.5 0.0 1.7 7.5 0.0 2.1 2 0 0 2 2 2 0 Sulphur oxygenase reductase RRM_2 PF04059.12 ORF152963 - 0.073 13.3 0.8 0.42 10.9 0.1 2.2 2 1 0 2 2 2 0 RNA recognition motif 2 RuBisCO_small PF00101.20 ORF152892 - 0.042 13.8 0.2 0.11 12.5 0.2 1.7 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain Ribonucleas_3_3 PF14622.6 ORF149503 - 2e-33 115.3 0.0 3.1e-33 114.7 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.26 ORF149503 - 6.7e-20 71.7 0.0 1.6e-19 70.5 0.0 1.7 1 0 0 1 1 1 1 Ribonuclease III domain dsrm PF00035.26 ORF149503 - 7.8e-15 55.3 0.0 1.6e-14 54.4 0.0 1.5 1 0 0 1 1 1 1 Double-stranded RNA binding motif DND1_DSRM PF14709.7 ORF149503 - 1.5e-05 25.1 0.0 3.3e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 double strand RNA binding domain from DEAD END PROTEIN 1 Syntaxin-18_N PF10496.9 ORF141553 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus PknH_C PF14032.6 ORF135523 - 0.056 13.3 0.2 0.099 12.5 0.2 1.3 1 0 0 1 1 1 0 PknH-like extracellular domain RCC1_2 PF13540.6 ORF133625 - 1.9e-16 59.4 25.1 0.00013 21.7 0.1 7.6 8 0 0 8 8 8 6 Regulator of chromosome condensation (RCC1) repeat DUF4951 PF16309.5 ORF133625 - 0.78 9.8 3.0 16 5.6 0.0 3.7 3 2 1 4 4 4 0 Domian of unknown function (DUF4951) GyrB_insert PF18053.1 ORF131301 - 1.4e-56 190.9 0.1 2.2e-56 190.3 0.1 1.3 1 0 0 1 1 1 1 DNA gyrase B subunit insert domain DNA_gyraseB_C PF00986.21 ORF131301 - 1.6e-31 108.2 0.2 3.6e-31 107.1 0.2 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus Toprim PF01751.22 ORF131301 - 4.5e-08 33.2 0.0 1.3e-07 31.8 0.0 1.8 1 0 0 1 1 1 1 Toprim domain Spindle_Spc25 PF08234.12 ORF131301 - 0.036 14.3 0.0 0.11 12.7 0.0 1.8 2 0 0 2 2 2 0 Chromosome segregation protein Spc25 Ank_2 PF12796.7 ORF125188 - 0.016 15.8 0.2 0.15 12.6 0.1 2.2 1 1 0 1 1 1 0 Ankyrin repeats (3 copies) BTB PF00651.31 ORF125188 - 0.084 13.1 0.7 1.4 9.2 0.1 2.3 2 0 0 2 2 2 0 BTB/POZ domain Ank_5 PF13857.6 ORF125188 - 0.094 13.1 0.2 0.27 11.6 0.0 1.9 2 0 0 2 2 2 0 Ankyrin repeats (many copies) RabGAP-TBC PF00566.18 ORF123634 - 2e-40 138.7 0.0 2.7e-40 138.3 0.0 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Mis14 PF08641.12 ORF123634 - 0.11 12.8 0.0 0.19 12.1 0.0 1.2 1 0 0 1 1 1 0 Kinetochore protein Mis14 like Syntaxin-18_N PF10496.9 ORF116488 - 0.072 13.4 0.5 0.18 12.1 0.5 1.7 1 0 0 1 1 1 0 SNARE-complex protein Syntaxin-18 N-terminus Lig_chan PF00060.26 ORF115911 - 7.6e-07 29.1 0.1 1.2e-06 28.5 0.1 1.3 1 0 0 1 1 1 1 Ligand-gated ion channel CPBP PF02517.16 ORF114219 - 9.8e-09 35.5 9.9 2e-08 34.5 7.2 2.3 1 1 1 2 2 2 1 CPBP intramembrane metalloprotease zf-RING_2 PF13639.6 ORF110958 - 6.8e-08 32.7 8.9 6.8e-06 26.3 2.5 2.4 2 0 0 2 2 2 2 Ring finger domain zf-rbx1 PF12678.7 ORF110958 - 1.3e-05 25.4 9.3 3.6e-05 24.0 9.3 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF110958 - 0.00028 20.7 8.0 0.005 16.7 2.5 2.4 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF110958 - 0.0045 17.0 1.0 0.0092 16.0 1.0 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF110958 - 0.0097 15.8 5.4 0.12 12.3 5.4 2.3 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF110958 - 0.03 14.4 3.4 0.058 13.4 0.3 2.4 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_5 PF14634.6 ORF110958 - 0.044 13.8 5.5 0.048 13.6 2.0 2.2 2 0 0 2 2 2 0 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF110958 - 0.071 13.0 7.8 0.29 11.0 2.3 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Ish1 PF10281.9 ORF110958 - 0.2 12.0 1.4 8.2 6.8 0.0 2.9 3 0 0 3 3 3 0 Putative stress-responsive nuclear envelope protein Prok-RING_4 PF14447.6 ORF110958 - 0.68 9.8 4.6 0.48 10.3 1.9 2.0 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 RepB PF07506.11 ORF110954 - 0.013 15.6 1.1 0.067 13.3 0.2 2.1 2 0 0 2 2 2 0 RepB plasmid partitioning protein PP2C_C PF07830.13 ORF110954 - 0.32 11.5 5.3 2.2 8.8 0.3 3.2 3 0 0 3 3 3 0 Protein serine/threonine phosphatase 2C, C-terminal domain Yip1 PF04893.17 ORF110764 - 1.1e-06 28.4 9.9 1.6e-06 27.9 9.9 1.3 1 0 0 1 1 1 1 Yip1 domain ADH_zinc_N PF00107.26 ORF110260 - 1e-09 38.5 0.0 1.7e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF110260 - 0.00043 20.1 0.0 0.0011 18.8 0.0 1.7 1 1 1 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 ORF110260 - 0.0053 17.8 0.0 0.014 16.4 0.0 1.8 1 1 0 1 1 1 1 Zinc-binding dehydrogenase GRIP PF01465.20 ORF103586 - 5.3e-07 29.4 0.0 1.4e-06 28.1 0.0 1.7 1 0 0 1 1 1 1 GRIP domain SlyX PF04102.12 ORF103586 - 2.3 8.9 32.1 0.1 13.2 1.7 5.1 3 1 2 5 5 5 0 SlyX TPR_MLP1_2 PF07926.12 ORF103586 - 3.3 7.8 60.4 0.027 14.5 22.7 4.9 1 1 4 5 5 5 0 TPR/MLP1/MLP2-like protein Baculo_PEP_C PF04513.12 ORF103586 - 3.5 7.6 22.2 0.16 12.0 4.1 3.3 2 1 2 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus CENP-F_leu_zip PF10473.9 ORF103586 - 4.3 7.4 65.4 0.66 10.0 17.7 4.2 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Filament PF00038.21 ORF103586 - 5.3 6.5 55.7 0.2 11.2 16.6 3.5 1 1 2 3 3 3 0 Intermediate filament protein DUF3584 PF12128.8 ORF103586 - 7.6 3.9 55.8 14 3.1 55.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) DUF812 PF05667.11 ORF103586 - 8.2 5.2 64.3 9.9 4.9 17.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Rootletin PF15035.6 ORF103586 - 8.7 6.3 49.5 0.021 14.8 19.6 3.1 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion DUF885 PF05960.11 ORF103586 - 9.9 5.7 14.8 2.7 7.5 5.3 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF885) SBP_bac_8 PF13416.6 ORF10219 - 2.6e-37 129.2 11.7 3e-37 129.0 11.7 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 ORF10219 - 2.3e-31 109.9 9.8 3.2e-31 109.5 9.8 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 ORF10219 - 0.00012 21.6 0.2 0.045 13.2 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein Recep_L_domain PF01030.24 NODE_18485_length_1029_cov_233.485915_g14087_i0reverse_frame_1 - 0.025 14.7 0.9 0.084 13.0 0.9 1.8 1 0 0 1 1 1 0 Receptor L domain AF-4 PF05110.13 NODE_18386_length_1032_cov_108.569709_g14013_i0reverse_frame_2 - 0.025 12.7 25.7 0.028 12.6 25.7 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein LAP1C PF05609.12 NODE_18386_length_1032_cov_108.569709_g14013_i0reverse_frame_2 - 0.27 10.3 18.0 0.32 10.0 18.0 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) CDC27 PF09507.10 NODE_18386_length_1032_cov_108.569709_g14013_i0reverse_frame_2 - 3.4 7.0 45.2 5.1 6.4 45.2 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Peptidase_C1 PF00112.23 ORF99451 - 9.8e-59 199.1 3.8 1.8e-58 198.2 3.8 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF99451 - 6.2e-13 49.0 3.7 6.2e-13 49.0 3.7 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF99451 - 1e-05 24.5 0.2 0.073 11.8 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Propeptide_C1 PF08127.13 ORF99451 - 0.012 15.4 0.0 0.034 14.0 0.0 1.8 2 0 0 2 2 2 0 Peptidase family C1 propeptide Mtc PF03820.17 ORF99238 - 1.1e-85 287.5 0.0 1.2e-85 287.3 0.0 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier Glyco_transf_22 PF03901.17 ORF99238 - 0.12 11.6 1.0 0.14 11.4 0.1 1.5 2 0 0 2 2 2 0 Alg9-like mannosyltransferase family LRAT PF04970.13 ORF99013 - 1.8e-05 25.1 0.0 3e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Lecithin retinol acyltransferase 7TM_GPCR_Srd PF10317.9 ORF99013 - 0.1 11.8 4.9 0.15 11.2 4.9 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd ADH_N PF08240.12 ORF98704 - 2.1e-26 91.9 3.2 3.7e-26 91.1 2.2 1.9 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 ORF98704 - 3.8e-25 88.3 0.1 1.1e-24 86.8 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 ORF98704 - 2.2e-07 30.6 0.0 3.2e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF98704 - 6.5e-07 30.5 0.0 1.9e-06 28.9 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 ORF98704 - 0.021 14.2 0.0 0.039 13.3 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DapB_N PF01113.20 ORF98704 - 0.027 14.6 0.1 0.13 12.4 0.1 2.0 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus ThiF PF00899.21 ORF98704 - 0.027 13.8 1.0 0.36 10.2 0.1 2.1 2 0 0 2 2 2 0 ThiF family Methyltransf_25 PF13649.6 ORF98704 - 0.053 14.2 0.0 0.11 13.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DUF4436 PF14494.6 ORF98704 - 0.059 12.6 0.0 1.7 7.9 0.0 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4436) Reprolysin_5 PF13688.6 ORF91971 - 0.13 12.4 0.5 0.2 11.8 0.5 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12 Exo5 PF09810.9 ORF91971 - 0.17 11.3 4.0 0.22 10.9 4.0 1.2 1 0 0 1 1 1 0 Exonuclease V - a 5' deoxyribonuclease Spt20 PF12090.8 ORF91971 - 0.3 10.7 15.9 0.61 9.7 15.9 1.4 1 0 0 1 1 1 0 Spt20 family Exonuc_VII_L PF02601.15 ORF91971 - 1.5 8.3 10.5 0.79 9.2 8.3 1.8 2 0 0 2 2 2 0 Exonuclease VII, large subunit DUF4094 PF13334.6 ORF91971 - 2.9 8.4 7.2 0.55 10.7 2.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) Cyclin_N PF00134.23 ORF89103 - 4.3e-23 81.4 0.5 1.1e-22 80.2 0.5 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain MCU PF04678.13 ORF76445 - 1.4e-18 67.6 0.2 2.1e-18 67.0 0.2 1.3 1 0 0 1 1 1 1 Mitochondrial calcium uniporter Claudin_2 PF13903.6 ORF76445 - 0.021 14.6 0.0 0.034 13.9 0.0 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction G-patch_2 PF12656.7 ORF7172 - 0.064 13.4 0.2 0.12 12.5 0.2 1.3 1 0 0 1 1 1 0 G-patch domain DUF1230 PF06799.11 ORF67055 - 0.31 11.1 1.6 0.62 10.2 1.6 1.6 1 0 0 1 1 1 0 Conserved in the green lineage and diatoms 27 SIP1 PF04938.12 ORF67055 - 2.2 7.9 8.7 5 6.8 1.1 2.5 1 1 1 2 2 2 0 Survival motor neuron (SMN) interacting protein 1 (SIP1) ER PF01133.17 ORF6536 - 0.057 13.5 0.4 0.18 11.8 0.1 2.0 2 0 0 2 2 2 0 Enhancer of rudimentary ELYS PF13934.6 ORF59626 - 0.11 12.4 0.4 0.2 11.6 0.4 1.4 1 0 0 1 1 1 0 Nuclear pore complex assembly DUF4381 PF14316.6 ORF59626 - 0.24 11.7 4.6 0.2 11.9 0.8 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4381) Y_phosphatase PF00102.27 ORF59562 - 1e-59 202.0 2.0 3.8e-59 200.1 2.0 1.8 1 1 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.20 ORF59562 - 9.6e-05 22.2 0.0 9.6e-05 22.2 0.0 2.5 3 1 0 4 4 4 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 ORF59562 - 0.00017 21.8 0.7 0.00085 19.5 0.1 2.4 2 1 0 2 2 2 1 Inositol hexakisphosphate Y_phosphatase3 PF13350.6 ORF59562 - 0.00031 20.8 0.1 0.0012 18.9 0.1 1.8 1 1 0 1 1 1 1 Tyrosine phosphatase family Peripla_BP_3 PF13377.6 ORF59369 - 3.6e-36 125.0 0.4 1.1e-35 123.4 0.1 1.9 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF59369 - 9.2e-28 97.4 0.0 1.2e-27 97.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 ORF59369 - 1.4e-21 76.0 1.4 7.9e-21 73.6 1.2 2.4 2 0 0 2 2 2 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 ORF59369 - 2.3e-12 47.0 0.0 8.1e-12 45.3 0.0 1.9 1 1 0 1 1 1 1 Periplasmic binding protein domain HTH_Tnp_ISL3 PF13542.6 ORF59369 - 4.1e-05 22.9 1.3 0.0034 16.8 0.3 3.2 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 HTH_3 PF01381.22 ORF59369 - 0.0039 17.2 0.0 0.0083 16.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix PucR PF07905.11 ORF59369 - 0.012 15.9 0.0 0.15 12.3 0.0 2.3 2 0 0 2 2 2 0 Purine catabolism regulatory protein-like family HTH_26 PF13443.6 ORF59369 - 0.038 14.4 0.0 0.072 13.5 0.0 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_23 PF13384.6 ORF59369 - 0.047 13.5 0.0 0.13 12.1 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain MerR PF00376.23 ORF59369 - 0.052 13.3 0.2 0.11 12.3 0.2 1.6 1 0 0 1 1 1 0 MerR family regulatory protein HTH_31 PF13560.6 ORF59369 - 0.055 13.8 0.4 0.18 12.2 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_17 PF12728.7 ORF59369 - 0.064 13.5 0.0 0.17 12.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3853 PF12964.7 ORF59369 - 0.1 12.8 0.0 0.22 11.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3853) HTH_38 PF13936.6 ORF59369 - 0.42 10.4 3.8 0.44 10.3 0.1 2.6 3 0 0 3 3 3 0 Helix-turn-helix domain TPR_12 PF13424.6 ORF54295 - 4.8e-11 42.8 0.0 6.7e-06 26.3 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF54295 - 9.4e-05 22.2 0.0 0.0021 17.9 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat Utp11 PF03998.13 ORF54295 - 1.4 8.8 5.9 3.6 7.4 5.9 1.6 1 1 0 1 1 1 0 Utp11 protein Fibin PF15819.5 ORF53981 - 0.013 15.2 0.9 0.027 14.2 0.9 1.5 1 0 0 1 1 1 0 Fin bud initiation factor homologue Adeno_GP19K PF04881.13 ORF53981 - 0.027 14.5 0.0 0.055 13.5 0.0 1.5 1 0 0 1 1 1 0 Adenovirus GP19K TPT PF03151.16 ORF52171 - 9.9e-17 61.2 3.9 1.2e-16 60.9 3.9 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF52171 - 9.9e-11 42.0 25.3 1.9e-07 31.3 5.4 2.1 2 0 0 2 2 2 2 EamA-like transporter family CTP_transf_like PF01467.26 ORF5112 - 3.6e-07 30.5 0.0 7.6e-07 29.4 0.0 1.6 1 1 0 1 1 1 1 Cytidylyltransferase-like S1 PF00575.23 ORF50349 - 1.8e-42 143.6 5.6 1.9e-13 50.5 0.2 3.5 4 0 0 4 4 4 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF50349 - 3.9e-09 36.3 2.0 0.0024 17.8 0.0 3.0 3 0 0 3 3 3 2 RNase II-type exonuclease C-terminal S1 domain S1_2 PF13509.6 ORF50349 - 1.4e-05 25.0 0.8 1.3 9.2 0.0 5.1 3 3 0 3 3 3 1 S1 domain CSD PF00313.22 ORF50349 - 0.0023 17.7 2.9 0.91 9.4 0.1 3.4 3 0 0 3 3 3 2 'Cold-shock' DNA-binding domain Agenet PF05641.12 ORF50349 - 0.0051 17.3 0.0 0.19 12.2 0.0 3.2 3 0 0 3 3 3 1 Agenet domain DUF3016 PF11454.8 ORF50349 - 0.06 13.1 0.1 5.8 6.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3016) MotY_N PF18393.1 ORF50349 - 0.076 13.1 0.1 0.21 11.7 0.0 1.7 2 0 0 2 2 2 0 MotY N-terminal domain DUF3221 PF11518.8 ORF50349 - 0.27 11.6 5.2 16 5.9 0.0 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF3221) ProQ_C PF17516.2 ORF50349 - 0.62 9.5 2.7 12 5.4 0.2 3.0 3 0 0 3 3 3 0 ProQ C-terminal domain FAD_binding_5 PF00941.21 ORF44420 - 3.5e-51 173.3 0.0 5.5e-51 172.7 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 ORF44420 - 2.3e-24 85.5 0.1 6.7e-24 84.0 0.0 1.8 2 0 0 2 2 2 1 CO dehydrogenase flavoprotein C-terminal domain LsmAD PF06741.13 ORF38712 - 0.16 12.5 3.4 6.6 7.3 0.0 3.1 3 0 0 3 3 3 0 LsmAD domain CTP_transf_like PF01467.26 ORF34425 - 3.6e-07 30.5 0.0 7.6e-07 29.4 0.0 1.6 1 1 0 1 1 1 1 Cytidylyltransferase-like BBL5 PF07289.11 ORF3095 - 5.9e-129 429.9 1.3 6.6e-129 429.7 1.3 1.0 1 0 0 1 1 1 1 Bardet-Biedl syndrome 5 protein Voldacs PF03517.13 ORF3095 - 4.1e-05 23.7 0.3 0.021 14.9 0.0 2.5 2 0 0 2 2 2 2 Regulator of volume decrease after cellular swelling Vps36_ESCRT-II PF11605.8 ORF3095 - 6.9e-05 23.0 0.0 0.06 13.5 0.0 2.5 2 0 0 2 2 2 2 Vacuolar protein sorting protein 36 Vps36 bPH_3 PF14470.6 ORF3095 - 0.0021 18.4 0.1 0.021 15.2 0.0 2.2 2 0 0 2 2 2 1 Bacterial PH domain Hen1_Lam_C PF18441.1 ORF3095 - 0.0086 15.9 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 1 Hen1 La-motif C-terminal domain DENN PF02141.21 ORF30685 - 1.6e-20 73.9 2.3 5.5e-20 72.1 2.3 2.0 1 1 0 1 1 1 1 DENN (AEX-3) domain dDENN PF03455.19 ORF30685 - 0.00015 21.7 0.2 0.00044 20.2 0.2 1.8 1 0 0 1 1 1 1 dDENN domain Peptidase_M54 PF07998.11 ORF29638 - 9.3e-10 38.8 2.6 1.9e-09 37.8 2.1 1.7 1 1 1 2 2 2 1 Peptidase family M54 Reprolysin_4 PF13583.6 ORF29638 - 0.00063 19.4 0.1 0.0011 18.7 0.1 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M57 PF12388.8 ORF29638 - 0.0011 18.7 0.3 0.0021 17.7 0.3 1.4 1 0 0 1 1 1 1 Dual-action HEIGH metallo-peptidase Reprolysin_3 PF13582.6 ORF29638 - 0.0087 16.6 0.0 0.02 15.4 0.0 1.7 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.8 ORF29638 - 0.019 13.6 1.4 0.05 12.2 1.4 1.6 1 0 0 1 1 1 0 Putative peptidase family Peptidase_M10 PF00413.24 ORF29638 - 0.026 14.4 0.2 0.037 13.9 0.2 1.4 1 1 0 1 1 1 0 Matrixin Reprolysin_2 PF13574.6 ORF29638 - 0.029 14.3 0.1 0.069 13.0 0.0 1.6 2 0 0 2 2 2 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.6 ORF29638 - 0.033 14.3 0.0 0.049 13.8 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12 Peptidase_M43 PF05572.13 ORF29638 - 0.098 12.6 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 Pregnancy-associated plasma protein-A Cyclin_N PF00134.23 ORF2861 - 4.3e-23 81.4 0.5 1.1e-22 80.2 0.5 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain IFT81_CH PF18383.1 ORF28510 - 3e-21 76.0 0.0 3e-21 76.0 0.0 2.7 2 1 1 3 3 3 1 Intraflagellar transport 81 calponin homology domain Tricorn_C1 PF14684.6 ORF28510 - 0.068 13.3 0.4 0.35 11.0 0.0 2.4 3 0 0 3 3 3 0 Tricorn protease C1 domain LPP PF04728.13 ORF28510 - 0.23 11.9 7.3 0.67 10.4 1.2 3.2 2 1 0 2 2 2 0 Lipoprotein leucine-zipper HALZ PF02183.18 ORF28510 - 0.47 10.7 7.7 9.2 6.6 1.3 3.3 2 1 1 3 3 3 0 Homeobox associated leucine zipper TSC22 PF01166.18 ORF28510 - 0.9 9.9 7.6 26 5.2 3.6 3.4 2 1 1 3 3 3 0 TSC-22/dip/bun family DUF1664 PF07889.12 ORF28510 - 1.3 9.1 17.5 3.2 7.8 4.5 3.6 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) DUF2383 PF09537.10 ORF25227 - 0.0044 17.3 1.0 0.016 15.5 0.1 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF2383) QIL1 PF15884.5 ORF25227 - 0.14 12.8 1.0 0.68 10.6 0.9 2.2 1 1 0 1 1 1 0 MICOS complex subunit MIC13, QIL1 CPG4 PF15481.6 ORF25227 - 4 8.1 9.7 2.8 8.6 4.2 2.4 2 0 0 2 2 2 0 Chondroitin proteoglycan 4 DUF4946 PF16304.5 ORF17452 - 0.012 15.3 0.0 0.022 14.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4946) AUDH_Cupin PF18637.1 ORF17452 - 0.081 12.9 2.1 4.1 7.4 0.1 2.4 2 0 0 2 2 2 0 Aldos-2-ulose dehydratase/isomerase (AUDH) Cupin domain SMAP PF15477.6 ORF17452 - 0.081 13.9 2.7 3.1 8.8 0.8 3.1 2 1 0 2 2 2 0 Small acidic protein family Flu_M2 PF00599.17 ORF17452 - 0.14 12.2 0.5 0.67 10.1 0.1 2.1 2 0 0 2 2 2 0 Influenza Matrix protein (M2) NPC1_N PF16414.5 ORF14964 - 1.3e-23 83.9 16.5 1.8e-23 83.4 16.5 1.2 1 0 0 1 1 1 1 Niemann-Pick C1 N terminus DUF4834 PF16118.5 ORF14964 - 0.018 16.0 0.2 0.032 15.2 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) ASFV_J13L PF05568.11 ORF14964 - 0.028 14.2 0.0 0.042 13.6 0.0 1.3 1 0 0 1 1 1 0 African swine fever virus J13L protein OAD_gamma PF04277.13 ORF14964 - 0.086 13.4 0.0 0.17 12.5 0.0 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain ECSCR PF15820.5 ORF14964 - 0.097 12.5 0.3 0.17 11.7 0.3 1.4 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator Pilin_N PF07790.11 ORF14964 - 0.19 12.7 0.3 0.52 11.3 0.1 1.7 2 0 0 2 2 2 0 Archaeal Type IV pilin, N-terminal MRAP PF15183.6 ORF14964 - 0.84 9.6 0.0 0.84 9.6 0.0 2.4 3 0 0 3 3 3 0 Melanocortin-2 receptor accessory protein family TPP_enzyme_C PF02775.21 ORF148148 - 1.2e-34 119.3 0.1 2.2e-34 118.5 0.1 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF148148 - 4.7e-13 49.1 0.2 1.9e-12 47.1 0.0 2.1 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, central domain Cupin_8 PF13621.6 ORF144975 - 4.6e-31 108.5 0.0 6.9e-31 107.9 0.0 1.2 1 0 0 1 1 1 1 Cupin-like domain JmjC PF02373.22 ORF144975 - 4.9e-07 30.2 0.0 1.2e-06 28.9 0.0 1.7 1 1 0 1 1 1 1 JmjC domain, hydroxylase HlyD_3 PF13437.6 ORF144026 - 8.6e-20 71.4 0.1 1.3e-12 48.3 0.0 2.7 2 1 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 ORF144026 - 1.6e-18 66.2 0.0 3.3e-16 58.8 0.1 2.9 2 0 0 2 2 2 1 Biotin-lipoyl like HlyD_D23 PF16576.5 ORF144026 - 5.8e-17 61.6 0.8 5.2e-16 58.5 0.8 2.0 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD PF00529.20 ORF144026 - 4.1e-10 39.4 0.0 6.5e-10 38.8 0.0 1.3 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 ORF144026 - 6.1e-05 22.8 0.0 0.055 13.3 0.1 2.4 2 0 0 2 2 2 2 Biotin-requiring enzyme HlyD_2 PF12700.7 ORF144026 - 0.05 12.3 0.0 0.11 11.2 0.0 1.4 2 0 0 2 2 2 0 HlyD family secretion protein OEP PF02321.18 ORF144026 - 0.08 12.7 12.8 0.068 13.0 11.8 1.4 1 1 0 1 1 1 0 Outer membrane efflux protein PTS_EIIA_1 PF00358.20 ORF144026 - 0.1 12.4 0.0 1.7 8.4 0.0 2.5 2 0 0 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Prok-RING_4 PF14447.6 ORF140167 - 0.0001 22.1 7.2 0.0001 22.1 7.2 3.3 3 2 0 3 3 3 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF140167 - 0.00016 21.5 5.9 0.00016 21.5 5.9 4.5 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) Zn_Tnp_IS1595 PF12760.7 ORF140167 - 0.021 14.8 2.2 0.021 14.8 2.2 3.1 2 1 0 2 2 2 0 Transposase zinc-ribbon domain zf-RING_4 PF14570.6 ORF140167 - 0.024 14.4 5.3 0.024 14.4 5.3 3.4 4 0 0 4 4 4 0 RING/Ubox like zinc-binding domain MTS PF05175.14 ORF13847 - 3.6e-61 205.6 0.0 5.2e-61 205.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MTS_N PF08468.11 ORF13847 - 1e-56 191.4 0.0 2e-56 190.4 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase small domain N-terminal Methyltransf_25 PF13649.6 ORF13847 - 5.9e-12 46.1 0.3 2.3e-11 44.2 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF13847 - 3.4e-11 43.1 0.0 5.6e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF13847 - 1.4e-08 35.4 0.0 3.4e-08 34.1 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain PrmA PF06325.13 ORF13847 - 1.6e-08 34.3 0.0 2.4e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 ORF13847 - 4e-06 27.4 0.0 7.9e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF13847 - 3.3e-05 23.6 0.0 0.00045 19.9 0.0 2.0 2 0 0 2 2 2 1 Nodulation protein S (NodS) Methyltransf_23 PF13489.6 ORF13847 - 3.9e-05 23.5 0.0 0.00015 21.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.7 ORF13847 - 0.00051 20.0 0.0 0.00089 19.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 ORF13847 - 0.0064 16.2 0.0 0.017 14.8 0.0 1.6 2 0 0 2 2 2 1 Lysine methyltransferase Cons_hypoth95 PF03602.15 ORF13847 - 0.008 15.8 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_2 PF00891.18 ORF13847 - 0.0084 15.4 0.0 0.013 14.8 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain Ubie_methyltran PF01209.18 ORF13847 - 0.014 14.8 0.0 0.026 13.9 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family UPF0020 PF01170.18 ORF13847 - 0.019 14.7 0.0 0.031 14.0 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 GidB PF02527.15 ORF13847 - 0.038 13.3 0.1 0.065 12.5 0.1 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_10 PF05971.12 ORF13847 - 0.039 13.3 0.0 0.1 11.9 0.0 1.5 1 1 0 1 1 1 0 RNA methyltransferase tRNA_U5-meth_tr PF05958.11 ORF13847 - 0.047 12.7 0.0 0.068 12.2 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase N6_Mtase PF02384.16 ORF13847 - 0.083 12.1 0.0 2.5 7.3 0.0 2.7 2 1 0 2 2 2 0 N-6 DNA Methylase CMAS PF02353.20 ORF13847 - 0.091 12.0 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase FmrO PF07091.11 ORF13847 - 0.096 12.2 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) APH PF01636.23 ORF128364 - 3.4e-10 40.3 0.0 7.8e-10 39.1 0.0 1.5 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pkinase PF00069.25 ORF128364 - 0.034 13.5 0.0 0.048 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Gly_acyl_tr_N PF06021.11 ORF118877 - 0.091 12.9 8.9 2.2 8.3 7.6 2.3 2 0 0 2 2 2 0 Aralkyl acyl-CoA:amino acid N-acyltransferase AAA_5 PF07728.14 ORF118877 - 0.12 12.4 0.2 5.8 6.9 0.2 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF4407 PF14362.6 ORF118877 - 1 8.6 7.3 1.5 8.1 7.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) V_ATPase_I PF01496.19 ORF11279 - 5.3e-107 358.8 5.3 6.1e-107 358.5 5.3 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family BBP1_N PF15271.6 ORF11279 - 0.03 15.1 0.5 0.049 14.4 0.5 1.3 1 0 0 1 1 1 0 Spindle pole body component BBP1, Mps2-binding protein Kinesin PF00225.23 ORF111231 - 6.7e-34 117.3 0.0 9.3e-34 116.8 0.0 1.2 1 0 0 1 1 1 1 Kinesin motor domain Prion PF00377.18 ORF111231 - 0.14 12.0 0.0 13 5.6 0.0 2.4 2 0 0 2 2 2 0 Prion/Doppel alpha-helical domain GARS_A PF01071.19 ORF99605 - 3.4e-39 134.6 0.0 4.7e-39 134.2 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_C PF02843.16 ORF99605 - 3.3e-26 91.4 0.1 5.6e-26 90.6 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain HEAT PF02985.22 ORF93638 - 2.2e-06 27.4 0.6 1.3 9.4 0.1 4.1 3 0 0 3 3 3 3 HEAT repeat NitrOD5 PF11537.8 ORF93638 - 0.054 13.6 0.0 0.16 12.1 0.0 1.8 1 0 0 1 1 1 0 Nitrosopumilus output domain 5 HEAT_2 PF13646.6 ORF93638 - 0.075 13.4 0.0 7 7.1 0.0 3.1 3 1 0 3 3 3 0 HEAT repeats Vac14_Fab1_bd PF12755.7 ORF93638 - 0.1 13.2 0.5 3 8.5 0.1 2.9 1 1 1 2 2 2 0 Vacuolar 14 Fab1-binding region IFRD PF05004.13 ORF93638 - 0.63 9.1 2.7 0.63 9.1 0.3 2.1 2 1 0 2 2 2 0 Interferon-related developmental regulator (IFRD) zf-C3HC4_3 PF13920.6 ORF93356 - 2.6e-15 56.0 12.8 2.6e-15 56.0 12.8 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF93356 - 1.8e-09 37.3 12.0 3.7e-09 36.3 12.0 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF93356 - 3.7e-05 24.0 13.6 3.7e-05 24.0 13.6 2.5 3 0 0 3 3 3 1 Ring finger domain zf-P11 PF03854.14 ORF93356 - 0.00052 19.6 9.4 0.0011 18.5 9.4 1.6 1 0 0 1 1 1 1 P-11 zinc finger DUF2072 PF09845.9 ORF93356 - 0.53 10.6 9.4 0.98 9.7 9.4 1.4 1 0 0 1 1 1 0 Zn-ribbon containing protein DZR PF12773.7 ORF93356 - 0.86 9.7 9.0 1.9 8.6 9.0 1.5 1 0 0 1 1 1 0 Double zinc ribbon zf-RING_5 PF14634.6 ORF93356 - 0.9 9.6 17.3 0.1 12.6 12.6 1.9 2 0 0 2 2 2 0 zinc-RING finger domain zf-RING_4 PF14570.6 ORF93356 - 2 8.3 13.3 0.51 10.2 9.7 2.0 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_2 PF13923.6 ORF93356 - 2.5 8.0 20.7 0.11 12.4 14.0 2.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Arm PF00514.23 ORF92581 - 1e-06 28.6 5.7 0.06 13.4 0.1 5.4 5 1 0 5 5 5 2 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF92581 - 0.0038 17.7 17.1 0.33 11.5 0.6 4.9 5 3 1 6 6 6 2 HEAT-like repeat NUC130_3NT PF08158.12 ORF92581 - 0.011 16.0 0.1 0.032 14.5 0.1 1.8 1 0 0 1 1 1 0 NUC130/3NT domain KAP PF05804.12 ORF92581 - 0.21 9.7 0.0 0.28 9.3 0.0 1.2 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) CD36 PF01130.21 ORF87507 - 0.041 12.4 0.7 0.055 12.0 0.7 1.0 1 0 0 1 1 1 0 CD36 family DnaJ PF00226.31 ORF68348 - 1.6e-17 63.3 0.1 2.6e-17 62.7 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain Ndc1_Nup PF09531.10 ORF68348 - 7.6 5.1 5.8 8.9 4.9 5.8 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup NEMP PF10225.9 ORF58281 - 0.00012 21.9 0.1 0.00012 21.9 0.1 1.9 2 0 0 2 2 2 1 NEMP family FAST_1 PF06743.15 ORF48558 - 4.1e-05 23.4 8.8 0.11 12.4 0.1 5.5 4 2 4 8 8 8 3 FAST kinase-like protein, subdomain 1 DUF1601 PF07671.11 ORF48558 - 9.5e-05 22.2 0.9 10 6.1 0.0 6.4 8 0 0 8 8 8 2 Protein of unknown function (DUF1601) ABC_tran PF00005.27 ORF46676 - 1.9e-18 67.3 0.0 2.9e-18 66.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF46676 - 7.1e-08 32.2 0.5 0.0019 17.7 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF46676 - 3e-06 27.3 1.1 0.048 13.5 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF46676 - 0.00054 19.9 0.1 0.0011 18.9 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 ORF46676 - 0.0017 18.0 0.1 0.0051 16.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF46676 - 0.0025 17.5 0.1 0.005 16.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 ORF46676 - 0.0042 17.5 1.1 0.14 12.6 0.5 2.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF46676 - 0.013 15.8 2.8 0.51 10.6 1.0 3.1 1 1 1 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF46676 - 0.021 15.0 0.1 0.052 13.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 ORF46676 - 0.026 14.6 1.4 0.7 9.9 0.2 2.3 2 1 0 2 2 2 0 Helicase HerA, central domain IstB_IS21 PF01695.17 ORF46676 - 0.033 13.9 0.2 0.087 12.6 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SSE PF00437.20 ORF46676 - 0.059 12.4 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 ORF46676 - 0.09 13.2 2.2 1 9.7 0.9 2.8 1 1 1 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 ORF46676 - 0.1 13.1 0.2 0.41 11.2 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 ORF46676 - 0.11 12.6 0.0 3.3 7.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 ORF46676 - 0.11 12.1 0.1 0.28 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF46676 - 0.13 12.7 0.0 0.43 11.0 0.1 1.9 2 0 0 2 2 1 0 RNA helicase MMR_HSR1 PF01926.23 ORF46676 - 0.13 12.3 0.0 0.51 10.4 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF46676 - 0.16 12.4 0.0 0.34 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF46676 - 0.25 11.2 1.0 0.62 10.0 0.0 2.1 2 1 0 2 2 2 0 NACHT domain PIP5K PF01504.18 ORF45516 - 2.5e-29 102.3 0.0 8.9e-27 94.0 0.0 2.0 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase RseC_MucC PF04246.12 ORF35483 - 0.091 12.7 0.2 0.2 11.6 0.2 1.6 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC NOG1 PF06858.14 ORF34010 - 0.13 12.1 0.6 0.43 10.4 0.1 2.1 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) AAA PF00004.29 ORF31082 - 1.3e-18 67.7 0.0 2.6e-18 66.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF31082 - 8.7e-06 25.8 0.0 2.4e-05 24.4 0.0 1.8 1 1 1 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF31082 - 6.3e-05 23.4 0.0 0.00026 21.4 0.0 1.9 1 1 1 2 2 2 1 AAA ATPase domain BCS1_N PF08740.11 ORF31082 - 0.0008 19.4 0.0 0.0015 18.6 0.0 1.4 1 0 0 1 1 1 1 BCS1 N terminal ATPase PF06745.13 ORF31082 - 0.0014 18.0 0.0 0.003 16.9 0.0 1.5 1 1 0 1 1 1 1 KaiC AAA_22 PF13401.6 ORF31082 - 0.0039 17.5 0.0 0.027 14.8 0.0 2.2 2 1 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 ORF31082 - 0.0042 17.5 0.0 0.0085 16.5 0.0 1.6 1 0 0 1 1 1 1 RNA helicase AAA_24 PF13479.6 ORF31082 - 0.0089 15.8 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF31082 - 0.013 16.0 0.0 0.019 15.5 0.0 1.3 1 0 0 1 1 1 0 ABC transporter NACHT PF05729.12 ORF31082 - 0.015 15.2 0.4 0.052 13.5 0.0 2.1 3 1 0 3 3 3 0 NACHT domain DUF815 PF05673.13 ORF31082 - 0.016 14.4 0.0 0.024 13.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 ORF31082 - 0.021 14.4 0.0 0.033 13.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_25 PF13481.6 ORF31082 - 0.031 13.8 0.0 0.8 9.2 0.0 2.1 1 1 1 2 2 2 0 AAA domain DUF2075 PF09848.9 ORF31082 - 0.061 12.5 0.0 0.092 12.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 ORF31082 - 0.07 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain SATase_N PF06426.14 ORF31082 - 0.081 13.3 0.1 1.1 9.6 0.0 2.3 2 0 0 2 2 2 0 Serine acetyltransferase, N-terminal PPV_E1_C PF00519.17 ORF31082 - 0.11 11.3 0.0 0.19 10.5 0.0 1.3 1 0 0 1 1 1 0 Papillomavirus helicase AAA_33 PF13671.6 ORF31082 - 0.15 12.2 0.0 0.59 10.3 0.0 1.9 2 1 0 2 2 2 0 AAA domain AAA_11 PF13086.6 ORF31082 - 0.17 11.7 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 ORF31082 - 0.18 11.8 0.0 0.53 10.3 0.0 1.7 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TIP49 PF06068.13 ORF31082 - 0.19 10.9 0.0 0.28 10.3 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain Y_phosphatase PF00102.27 ORF30282 - 4e-66 222.9 0.2 5.4e-66 222.5 0.2 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.20 ORF30282 - 7.2e-05 22.6 0.1 0.0005 19.9 0.0 2.3 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 ORF30282 - 0.00018 21.7 0.0 0.00094 19.3 0.0 2.1 2 0 0 2 2 2 1 Inositol hexakisphosphate Y_phosphatase3 PF13350.6 ORF30282 - 0.00055 20.0 0.0 0.00089 19.3 0.0 1.4 1 0 0 1 1 1 1 Tyrosine phosphatase family Pex19 PF04614.12 ORF25990 - 6.4e-22 78.5 40.9 2.9e-19 69.8 40.3 2.5 1 1 0 1 1 1 1 Pex19 protein family CdiI_2 PF18593.1 ORF25990 - 0.054 14.2 2.0 0.91 10.2 0.1 3.0 1 1 1 2 2 2 0 CdiI immunity protein BRCA2 PF00634.18 ORF25990 - 0.35 10.6 0.1 0.35 10.6 0.1 2.0 2 0 0 2 2 2 0 BRCA2 repeat DUF5388 PF17363.2 ORF25990 - 1.5 9.1 6.2 1.3 9.2 0.6 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5388) KinB_sensor PF16767.5 ORF25990 - 2.1 8.8 9.4 0.83 10.1 2.1 3.0 2 1 1 3 3 3 0 Sensor domain of alginate biosynthesis sensor protein KinB CCDC-167 PF15188.6 ORF25990 - 9.4 6.7 9.3 0.15 12.4 0.8 2.3 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 2OG-FeII_Oxy_3 PF13640.6 ORF24944 - 0.0012 19.7 0.0 0.0021 18.9 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily CD36 PF01130.21 ORF152041 - 0.041 12.4 0.7 0.055 12.0 0.7 1.0 1 0 0 1 1 1 0 CD36 family DUF547 PF04784.14 ORF148817 - 2.4e-15 56.6 0.0 1.2e-14 54.4 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function, DUF547 DUF99 PF01949.16 ORF148817 - 0.015 14.7 0.1 0.03 13.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF99 HEAT PF02985.22 ORF145272 - 2.2e-06 27.4 0.6 1.3 9.4 0.1 4.1 3 0 0 3 3 3 3 HEAT repeat NitrOD5 PF11537.8 ORF145272 - 0.054 13.6 0.0 0.16 12.1 0.0 1.8 1 0 0 1 1 1 0 Nitrosopumilus output domain 5 HEAT_2 PF13646.6 ORF145272 - 0.075 13.4 0.0 7 7.1 0.0 3.1 3 1 0 3 3 3 0 HEAT repeats Vac14_Fab1_bd PF12755.7 ORF145272 - 0.1 13.2 0.5 3 8.5 0.1 2.9 1 1 1 2 2 2 0 Vacuolar 14 Fab1-binding region IFRD PF05004.13 ORF145272 - 0.63 9.1 2.7 0.63 9.1 0.3 2.1 2 1 0 2 2 2 0 Interferon-related developmental regulator (IFRD) Aconitase PF00330.20 ORF140455 - 1.1e-34 120.2 0.0 1.1e-32 113.6 0.0 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Ketoacyl-synt_C PF02801.22 ORF140455 - 0.1 12.6 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Beta-ketoacyl synthase, C-terminal domain DUF521 PF04412.13 ORF140455 - 0.11 11.1 0.0 0.22 10.2 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF521) Bac_rhamnosid6H PF17389.2 ORF140455 - 0.14 11.3 0.1 0.42 9.8 0.0 1.6 2 0 0 2 2 2 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DUF1298 PF06974.13 ORF139345 - 3.7e-16 59.4 0.1 6.8e-16 58.5 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) WES_acyltransf PF03007.16 ORF139345 - 0.018 14.8 0.0 0.054 13.3 0.0 1.6 2 0 0 2 2 2 0 Wax ester synthase-like Acyl-CoA acyltransferase domain ABC_tran PF00005.27 ORF137669 - 1.9e-18 67.3 0.0 2.9e-18 66.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF137669 - 7.1e-08 32.2 0.5 0.0019 17.7 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF137669 - 3e-06 27.3 1.1 0.048 13.5 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF137669 - 0.00054 19.9 0.1 0.0011 18.9 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 ORF137669 - 0.0017 18.0 0.1 0.0051 16.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF137669 - 0.0025 17.5 0.1 0.005 16.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 ORF137669 - 0.0042 17.5 1.1 0.14 12.6 0.5 2.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF137669 - 0.013 15.8 2.8 0.51 10.6 1.0 3.1 1 1 1 2 2 2 0 AAA domain AAA_33 PF13671.6 ORF137669 - 0.021 15.0 0.1 0.052 13.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 ORF137669 - 0.026 14.6 1.4 0.7 9.9 0.2 2.3 2 1 0 2 2 2 0 Helicase HerA, central domain IstB_IS21 PF01695.17 ORF137669 - 0.033 13.9 0.2 0.087 12.6 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein T2SSE PF00437.20 ORF137669 - 0.059 12.4 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 ORF137669 - 0.09 13.2 2.2 1 9.7 0.9 2.8 1 1 1 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 ORF137669 - 0.1 13.1 0.2 0.41 11.2 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 ORF137669 - 0.11 12.6 0.0 3.3 7.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 ORF137669 - 0.11 12.1 0.1 0.28 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF137669 - 0.13 12.7 0.0 0.43 11.0 0.1 1.9 2 0 0 2 2 1 0 RNA helicase MMR_HSR1 PF01926.23 ORF137669 - 0.13 12.3 0.0 0.51 10.4 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF137669 - 0.16 12.4 0.0 0.34 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF137669 - 0.25 11.2 1.0 0.62 10.0 0.0 2.1 2 1 0 2 2 2 0 NACHT domain Thioredoxin_6 PF13848.6 ORF134793 - 3.5e-28 98.8 0.0 3.7e-23 82.4 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin-like domain Thioredoxin PF00085.20 ORF134793 - 6.6e-28 96.7 0.1 6.2e-26 90.4 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_7 PF13899.6 ORF134793 - 0.0015 18.6 0.0 0.026 14.7 0.0 2.6 2 0 0 2 2 2 1 Thioredoxin-like Thioredoxin_2 PF13098.6 ORF134793 - 0.0027 18.1 0.6 0.065 13.7 0.2 2.9 3 1 0 3 3 3 1 Thioredoxin-like domain UCH_1 PF13423.6 ORF134793 - 0.096 12.3 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase Thioredoxin_8 PF13905.6 ORF134793 - 0.11 12.8 0.0 0.3 11.4 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin-like Glyco_tranf_2_3 PF13641.6 ORF134746 - 0.0014 18.6 0.2 0.0022 17.9 0.2 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 ORF134746 - 0.0043 16.9 0.4 0.0078 16.0 0.4 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 2 HAD_SAK_2 PF18143.1 ORF134746 - 0.0088 16.4 1.1 0.016 15.5 1.1 1.4 1 0 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins Tugs PF17840.1 ORF134746 - 0.05 13.8 0.1 0.26 11.5 0.1 2.1 2 0 0 2 2 2 0 Tethering Ubl4a to BAGS domain PX PF00787.24 ORF131340 - 6.9e-12 45.3 0.0 1.1e-11 44.7 0.0 1.3 1 0 0 1 1 1 1 PX domain CSD PF00313.22 ORF129543 - 5.1e-05 23.1 0.4 0.0019 18.0 0.1 2.2 2 0 0 2 2 2 1 'Cold-shock' DNA-binding domain Transformer PF06495.11 ORF129543 - 0.048 13.7 16.8 0.078 13.1 16.8 1.3 1 0 0 1 1 1 0 Fruit fly transformer protein zf-CCCH PF00642.24 ORF124424 - 4.4e-06 26.5 3.5 8.7e-06 25.5 3.5 1.5 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF124424 - 8.3e-05 22.5 6.3 0.00017 21.6 6.3 1.5 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 ORF124424 - 0.00024 20.8 2.5 0.00047 19.9 2.5 1.5 1 0 0 1 1 1 1 CCCH-type zinc finger Torus PF16131.5 ORF124424 - 0.02 15.6 1.6 0.035 14.8 0.3 1.9 2 0 0 2 2 2 0 Torus domain zf-CCCH_2 PF14608.6 ORF124424 - 1.6 9.3 6.4 0.15 12.6 1.7 1.8 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger CD36 PF01130.21 ORF123807 - 0.041 12.4 0.7 0.055 12.0 0.7 1.0 1 0 0 1 1 1 0 CD36 family Sigma70_r3 PF04539.16 ORF118088 - 8.2e-22 77.1 6.7 1.4e-20 73.2 1.8 3.3 3 0 0 3 3 3 1 Sigma-70 region 3 Sigma70_r2 PF04542.14 ORF118088 - 1.9e-21 75.6 0.4 4e-21 74.5 0.1 1.8 2 0 0 2 2 2 1 Sigma-70 region 2 Sigma70_r4 PF04545.16 ORF118088 - 4.1e-17 61.4 3.7 2.7e-15 55.6 2.8 2.6 2 0 0 2 2 2 2 Sigma-70, region 4 Sigma70_r1_2 PF00140.20 ORF118088 - 1e-11 44.6 0.1 3.1e-11 43.1 0.1 1.9 1 0 0 1 1 1 1 Sigma-70 factor, region 1.2 zf-RING_2 PF13639.6 ORF116030 - 6e-09 36.1 2.9 6e-09 36.1 2.9 2.2 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF116030 - 1e-07 32.1 2.2 1e-07 32.1 2.2 2.0 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF116030 - 4.8e-06 26.5 0.5 4.8e-06 26.5 0.5 1.9 2 0 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF116030 - 7.3e-06 25.9 2.3 1e-05 25.5 1.1 1.9 2 0 0 2 2 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF116030 - 8.4e-06 25.6 2.1 2.5e-05 24.0 2.1 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF116030 - 5.7e-05 22.9 4.8 0.00046 20.0 4.8 2.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF116030 - 0.0001 22.0 4.5 0.0001 22.0 4.5 2.4 2 1 0 2 2 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF116030 - 0.00016 21.6 2.0 0.00038 20.4 2.0 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF116030 - 0.015 15.4 2.6 0.035 14.3 0.5 2.6 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING CMAS PF02353.20 ORF116030 - 0.026 13.8 0.4 0.04 13.2 0.4 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase zf-C3HC4_3 PF13920.6 ORF116030 - 0.06 13.2 1.8 0.24 11.3 1.8 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF116030 - 0.063 12.9 4.0 0.24 11.1 4.0 2.1 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-HC5HC2H_2 PF13832.6 ORF116030 - 0.066 13.4 1.1 0.14 12.3 0.1 2.0 2 0 0 2 2 2 0 PHD-zinc-finger like domain Prok-RING_4 PF14447.6 ORF116030 - 0.078 12.8 3.1 0.25 11.2 2.8 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 MukB PF04310.12 ORF116030 - 0.089 12.6 0.2 0.15 11.9 0.2 1.3 1 0 0 1 1 1 0 MukB N-terminal Oxidored_q4 PF00507.19 ORF116030 - 0.091 12.9 0.8 0.19 11.9 0.8 1.5 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RINGv PF12906.7 ORF116030 - 0.38 10.9 5.6 5.6 7.2 3.7 3.0 2 1 0 2 2 2 0 RING-variant domain MatE PF01554.18 ORF104547 - 1.7e-09 37.5 29.6 1.8e-05 24.4 18.8 3.4 3 1 0 3 3 3 2 MatE TraE PF05309.11 ORF104547 - 0.12 11.7 0.2 0.21 10.9 0.2 1.4 1 0 0 1 1 1 0 TraE protein PglL_A PF15864.5 ORF104547 - 0.36 10.6 0.0 0.36 10.6 0.0 3.0 4 0 0 4 4 4 0 Protein glycosylation ligase DDHD PF02862.17 ORF103560 - 7.9e-33 114.5 0.7 3.4e-20 73.2 0.0 2.2 1 1 1 2 2 2 2 DDHD domain Hydrolase_4 PF12146.8 ORF103560 - 0.056 12.7 0.0 0.089 12.0 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 cNMP_binding PF00027.29 ORF103033 - 2.4e-25 88.4 0.0 5.6e-12 45.6 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Ion_trans_2 PF07885.16 ORF102172 - 6.8e-25 86.8 20.0 1.6e-12 47.2 6.7 2.3 2 1 0 2 2 2 2 Ion channel EF-hand_6 PF13405.6 ORF102172 - 1.6e-10 40.1 4.9 9.6e-05 22.0 0.1 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF102172 - 2.1e-10 39.4 6.2 5.3e-05 22.5 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF102172 - 3.9e-10 40.0 3.6 7.7e-10 39.1 2.4 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF102172 - 5.1e-09 35.2 7.4 8.8e-05 21.8 0.2 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF102172 - 2.8e-07 30.3 2.8 0.0026 17.6 0.1 2.6 2 0 0 2 2 2 2 EF-hand domain pair PAP_fibrillin PF04755.12 ORF102172 - 0.18 11.7 0.0 0.31 11.0 0.0 1.3 1 0 0 1 1 1 0 PAP_fibrillin Peptidase_A24 PF01478.18 ORF102172 - 0.43 11.0 9.5 2 8.8 1.3 2.2 2 0 0 2 2 2 0 Type IV leader peptidase family Lig_chan PF00060.26 ORF102172 - 0.43 10.4 2.7 0.26 11.1 0.3 1.9 2 0 0 2 2 2 0 Ligand-gated ion channel PIP5K PF01504.18 NODE_18606_length_1024_cov_11843.612740_g14193_i0reverse_frame_2 - 3.6e-34 118.3 10.1 8.4e-34 117.0 10.1 1.6 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase DUF2654 PF10849.8 NODE_18606_length_1024_cov_11843.612740_g14193_i0reverse_frame_2 - 0.21 11.8 0.1 0.21 11.8 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2654) DUF5349 PF17298.2 NODE_18606_length_1024_cov_11843.612740_g14193_i0reverse_frame_2 - 0.32 10.7 8.5 0.45 10.2 8.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5349) SAM35 PF10806.8 NODE_18606_length_1024_cov_11843.612740_g14193_i0forward_frame_3 - 0.076 13.3 0.1 0.076 13.3 0.1 1.6 2 0 0 2 2 2 0 SAM35, subunit of SAM coomplex RMI1_C PF16099.5 ORF99678 - 0.064 13.1 0.2 1.1 9.2 0.1 2.2 2 0 0 2 2 2 0 Recq-mediated genome instability protein 1, C-terminal OB-fold Exo_endo_phos PF03372.23 ORF99065 - 2.6e-05 23.8 0.1 8.3e-05 22.2 0.0 2.0 2 1 0 2 2 2 1 Endonuclease/Exonuclease/phosphatase family Hexapep PF00132.24 ORF83310 - 5.1e-29 98.9 42.7 9e-10 37.9 4.9 6.0 3 2 3 7 7 7 7 Bacterial transferase hexapeptide (six repeats) LpxD PF04613.14 ORF83310 - 1.2e-21 76.2 0.0 2e-21 75.5 0.0 1.3 1 0 0 1 1 1 1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Hexapep_2 PF14602.6 ORF83310 - 7.6e-14 51.2 43.9 1e-07 31.6 8.0 5.8 3 2 2 5 5 5 4 Hexapeptide repeat of succinyl-transferase HSBP1 PF06825.12 ORF83310 - 0.022 14.6 0.2 0.045 13.6 0.2 1.4 1 0 0 1 1 1 0 Heat shock factor binding protein 1 DUF4954 PF16314.5 ORF83310 - 2.8 6.0 11.8 0.91 7.6 2.1 2.2 1 1 2 3 3 3 0 Domain of unknown function (DUF4954) Cys_rich_FGFR PF00839.17 ORF82865 - 4.5e-07 29.9 5.0 0.0017 18.5 0.4 3.0 2 1 1 3 3 3 2 Cysteine rich repeat DUF4366 PF14283.6 ORF82865 - 0.054 13.5 0.2 0.054 13.5 0.2 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4366) GREB1 PF15782.5 ORF82865 - 0.093 9.9 4.0 0.11 9.6 4.0 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer RskA PF10099.9 ORF82865 - 0.19 12.0 2.9 0.15 12.3 0.6 1.8 1 1 1 2 2 2 0 Anti-sigma-K factor rskA ALMT PF11744.8 ORF82865 - 3.3 6.5 6.8 3.7 6.3 6.8 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter AAA_11 PF13086.6 ORF82865 - 4.2 7.1 12.3 6.6 6.4 12.3 1.3 1 0 0 1 1 1 0 AAA domain Caudo_TAP PF02413.17 ORF82865 - 5 7.3 16.2 7.2 6.8 14.6 1.9 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK Hid1 PF12722.7 ORF82865 - 6.8 4.7 11.4 8.6 4.3 11.4 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein SHIPPO-rpt PF07004.12 ORF76309 - 0.00033 21.4 18.9 0.041 14.8 3.2 4.6 4 2 0 4 4 4 3 Sperm-tail PG-rich repeat Complex1_49kDa PF00346.19 ORF70308 - 5.9e-70 235.5 0.1 7.3e-70 235.1 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Consortin_C PF15281.6 ORF56387 - 9.6 6.2 7.3 1.4 9.0 1.2 2.7 2 0 0 2 2 2 0 Consortin C-terminus Gp_dh_C PF02800.20 ORF53477 - 1.9e-65 219.3 0.0 2.6e-65 218.8 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 ORF53477 - 1.9e-35 121.2 0.1 4.9e-35 119.9 0.1 1.7 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FHA PF00498.26 ORF48376 - 3.2e-09 37.0 0.0 2.5e-06 27.7 0.0 2.4 2 0 0 2 2 2 2 FHA domain IQCJ-SCHIP1 PF15157.6 ORF48267 - 0.22 11.4 0.0 0.52 10.1 0.0 1.6 1 0 0 1 1 1 0 Fusion protein IQCJ-SCHIP1 with IQ-like motif # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks49.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks49.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks49.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks49.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- LRR_6 PF13516.6 ORF140548 - 4.2e-05 23.3 14.4 0.76 10.0 0.0 5.8 6 0 0 6 6 6 4 Leucine Rich repeat LRR_4 PF12799.7 ORF140548 - 0.00044 20.6 23.8 0.00084 19.7 3.0 4.9 5 0 0 5 5 5 3 Leucine Rich repeats (2 copies) dCache_1 PF02743.18 ORF140548 - 0.011 15.6 0.0 0.029 14.2 0.0 1.7 1 0 0 1 1 1 0 Cache domain LRR_8 PF13855.6 ORF140548 - 0.012 15.4 23.6 0.59 9.9 7.9 5.1 2 1 2 4 4 4 0 Leucine rich repeat LRR_1 PF00560.33 ORF140548 - 0.11 13.1 20.0 8.7 7.3 0.1 6.5 6 1 0 6 6 6 0 Leucine Rich Repeat Phage_GP20 PF06810.11 ORF140548 - 0.26 11.1 5.6 0.34 10.7 3.6 2.3 2 0 0 2 2 2 0 Phage minor structural protein GP20 SSF PF00474.17 ORF95709 - 0.038 12.8 0.6 0.11 11.4 0.0 1.9 2 0 0 2 2 2 0 Sodium:solute symporter family BUD22 PF09073.10 ORF95709 - 0.1 12.0 4.3 0.21 10.9 4.3 1.4 1 0 0 1 1 1 0 BUD22 PRP1_N PF06424.12 ORF95709 - 0.34 11.3 5.0 0.75 10.2 5.0 1.5 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal Cwf_Cwc_15 PF04889.12 ORF95709 - 0.73 9.5 9.6 1.3 8.7 9.6 1.3 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein SURF2 PF05477.11 ORF95709 - 2.8 7.6 6.5 5.3 6.7 6.5 1.4 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) SSF PF00474.17 ORF75982 - 0.038 12.8 0.6 0.11 11.4 0.0 1.9 2 0 0 2 2 2 0 Sodium:solute symporter family BUD22 PF09073.10 ORF75982 - 0.1 12.0 4.3 0.21 10.9 4.3 1.4 1 0 0 1 1 1 0 BUD22 PRP1_N PF06424.12 ORF75982 - 0.34 11.3 5.0 0.75 10.2 5.0 1.5 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal Cwf_Cwc_15 PF04889.12 ORF75982 - 0.73 9.5 9.6 1.3 8.7 9.6 1.3 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein SURF2 PF05477.11 ORF75982 - 2.8 7.6 6.5 5.3 6.7 6.5 1.4 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) DUF3659 PF12396.8 ORF58720 - 8.8e-07 28.7 38.8 0.051 13.5 0.6 6.5 4 3 0 4 4 4 4 Protein of unknown function (DUF3659) FliC PF12445.8 ORF58720 - 0.016 15.5 0.9 0.43 10.9 0.1 2.7 2 0 0 2 2 2 0 Flagellin protein DUF3659 PF12396.8 ORF3556 - 8.3e-07 28.8 38.8 0.051 13.5 0.6 6.5 4 3 0 4 4 4 4 Protein of unknown function (DUF3659) FliC PF12445.8 ORF3556 - 0.016 15.5 0.9 0.43 10.9 0.1 2.7 2 0 0 2 2 2 0 Flagellin protein DUF3659 PF12396.8 ORF146779 - 1.5e-06 28.0 38.6 0.051 13.5 0.6 6.5 4 2 0 4 4 4 4 Protein of unknown function (DUF3659) FliC PF12445.8 ORF146779 - 0.016 15.5 0.9 0.43 10.9 0.1 2.7 2 0 0 2 2 2 0 Flagellin protein PSI PF01437.25 ORF46972 - 0.014 15.9 9.8 0.033 14.7 9.8 1.6 1 0 0 1 1 1 0 Plexin repeat Syntaxin_2 PF14523.6 ORF46972 - 0.24 11.8 6.7 0.21 12.0 0.6 2.9 2 0 0 2 2 2 0 Syntaxin-like protein Syntaxin-6_N PF09177.11 ORF46972 - 0.71 10.5 16.3 0.09 13.3 0.6 3.8 3 0 0 3 3 3 0 Syntaxin 6, N-terminal PSI_integrin PF17205.3 ORF46972 - 0.97 9.2 6.5 2 8.2 6.5 1.5 1 0 0 1 1 1 0 Integrin plexin domain Terminase_2 PF03592.16 ORF46972 - 8.3 6.9 9.8 0.44 11.0 3.0 2.4 3 0 0 3 3 3 0 Terminase small subunit tRNA-synt_1 PF00133.22 ORF135994 - 1.4e-30 106.1 0.0 1e-29 103.3 0.0 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF135994 - 5.5e-13 49.1 0.0 1.3e-12 47.9 0.0 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 ORF135994 - 6e-09 35.7 0.0 1.1e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 ORF135994 - 1.2e-08 34.1 0.2 1.1e-07 30.9 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (M) SBF2 PF12335.8 ORF135994 - 0.13 11.8 0.0 0.3 10.7 0.0 1.5 1 0 0 1 1 1 0 Myotubularin protein PSI PF01437.25 ORF114306 - 0.014 16.0 9.8 0.033 14.7 9.8 1.6 1 0 0 1 1 1 0 Plexin repeat Syntaxin_2 PF14523.6 ORF114306 - 0.23 11.8 6.7 0.21 12.0 0.6 2.9 2 0 0 2 2 2 0 Syntaxin-like protein Syntaxin-6_N PF09177.11 ORF114306 - 0.63 10.6 16.3 0.089 13.3 0.6 3.9 3 0 0 3 3 3 0 Syntaxin 6, N-terminal PSI_integrin PF17205.3 ORF114306 - 0.96 9.2 6.5 2 8.2 6.5 1.5 1 0 0 1 1 1 0 Integrin plexin domain Terminase_2 PF03592.16 ORF114306 - 8.2 6.9 9.8 0.44 11.0 3.0 2.4 3 0 0 3 3 3 0 Terminase small subunit DUF3659 PF12396.8 ORF87543 - 8.2e-07 28.9 38.8 0.051 13.5 0.6 6.5 4 3 0 4 4 4 4 Protein of unknown function (DUF3659) FliC PF12445.8 ORF87543 - 0.017 15.5 0.9 0.43 10.9 0.1 2.7 2 0 0 2 2 2 0 Flagellin protein ABC_tran PF00005.27 ORF82072 - 1.2e-25 90.7 0.0 3e-25 89.3 0.0 1.8 1 0 0 1 1 1 1 ABC transporter ABC2_membrane_3 PF12698.7 ORF82072 - 4.4e-23 81.9 22.9 8.1e-23 81.1 22.9 1.4 1 0 0 1 1 1 1 ABC-2 family transporter protein AAA_21 PF13304.6 ORF82072 - 5.4e-12 46.1 0.0 2.9e-09 37.2 0.0 2.5 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF82072 - 0.00038 19.9 0.0 0.0014 18.1 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain GxDLY PF14607.6 ORF80289 - 0.032 14.0 0.5 0.11 12.3 0.1 2.1 2 0 0 2 2 2 0 N-terminus of Esterase_SGNH_hydro-type RL11D PF11088.8 ORF80289 - 3.1 8.1 6.0 5.8 7.3 0.1 3.3 3 0 0 3 3 3 0 Glycoprotein encoding membrane proteins RL5A and RL6 Ephrin_rec_like PF07699.13 ORF138821 - 1.9e-06 27.5 7.3 1.9e-06 27.5 7.3 22.8 12 9 13 25 25 25 14 Putative ephrin-receptor like Ephrin_rec_like PF07699.13 ORF123440 - 1.9e-06 27.5 7.3 1.9e-06 27.5 7.3 22.8 12 9 13 25 25 25 14 Putative ephrin-receptor like ABC_tran PF00005.27 ORF100971 - 1.2e-25 90.7 0.0 3e-25 89.3 0.0 1.8 1 0 0 1 1 1 1 ABC transporter ABC2_membrane_3 PF12698.7 ORF100971 - 4.4e-23 81.9 22.9 8.1e-23 81.1 22.9 1.4 1 0 0 1 1 1 1 ABC-2 family transporter protein AAA_21 PF13304.6 ORF100971 - 5.4e-12 46.1 0.0 2.9e-09 37.2 0.0 2.5 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF100971 - 0.00038 19.9 0.0 0.0014 18.1 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SAPS PF04499.15 ORF67836 - 7.6e-10 38.2 0.8 7.6e-10 38.2 0.8 8.5 3 2 1 5 5 5 3 SIT4 phosphatase-associated protein VSP PF03302.13 ORF149252 - 0.0053 15.7 2.3 0.013 14.4 2.3 1.6 1 0 0 1 1 1 1 Giardia variant-specific surface protein Cadherin_C_2 PF16492.5 ORF149252 - 0.013 16.3 0.9 0.013 16.3 0.9 4.1 6 0 0 6 6 6 0 Cadherin cytoplasmic C-terminal He_PIG PF05345.12 ORF149252 - 0.037 14.2 0.5 3.3 7.9 0.1 3.6 2 1 1 3 3 3 0 Putative Ig domain PAG PF15347.6 ORF149252 - 0.059 12.4 0.3 0.12 11.4 0.3 1.4 1 0 0 1 1 1 0 Phosphoprotein associated with glycosphingolipid-enriched OAD_gamma PF04277.13 ORF149252 - 9.2 6.9 5.9 37 5.0 0.2 2.8 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Kelch_4 PF13418.6 ORF143949 - 2.3e-18 65.9 11.8 9e-06 25.6 0.4 6.3 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF143949 - 6.4e-14 51.7 3.2 0.00012 22.3 0.2 4.4 4 0 0 4 4 4 3 Kelch motif Kelch_5 PF13854.6 ORF143949 - 3.2e-13 49.3 1.6 0.00024 21.0 0.5 5.3 5 0 0 5 5 5 3 Kelch motif Kelch_2 PF07646.15 ORF143949 - 8.8e-12 44.5 8.0 2.5e-06 27.2 0.2 4.4 4 0 0 4 4 3 3 Kelch motif Kelch_1 PF01344.25 ORF143949 - 2.5e-10 39.8 6.4 7.6e-05 22.2 0.3 3.7 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 ORF143949 - 3.3e-10 40.0 4.6 0.00027 21.1 0.3 5.4 5 0 0 5 5 5 2 Galactose oxidase, central domain NCD3G PF07562.14 ORF143949 - 0.014 15.3 4.9 0.014 15.3 4.9 3.4 2 1 1 3 3 3 0 Nine Cysteines Domain of family 3 GPCR DUF3290 PF11694.8 ORF143949 - 0.059 13.3 0.6 0.22 11.5 0.6 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) TMEM154 PF15102.6 ORF143949 - 0.079 12.9 0.6 0.15 11.9 0.6 1.4 1 0 0 1 1 1 0 TMEM154 protein family Birna_VP5 PF03042.14 ORF143949 - 0.089 12.8 0.1 16 5.5 0.0 2.5 2 0 0 2 2 2 0 Birnavirus VP5 protein Ephrin_rec_like PF07699.13 ORF143949 - 0.67 9.8 21.9 0.98 9.2 2.7 3.7 1 1 2 3 3 3 0 Putative ephrin-receptor like ubiquitin PF00240.23 ORF99136 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF99136 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF99136 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF99136 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF99136 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF99136 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF99136 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF99136 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF99136 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF99136 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain ubiquitin PF00240.23 ORF95011 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF95011 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF95011 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF95011 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF95011 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF95011 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF95011 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF95011 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF95011 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF95011 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain ubiquitin PF00240.23 ORF68221 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF68221 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF68221 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF68221 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF68221 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF68221 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF68221 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF68221 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF68221 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF68221 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain ubiquitin PF00240.23 ORF2728 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF2728 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF2728 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF2728 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF2728 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF2728 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF2728 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF2728 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF2728 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF2728 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain ubiquitin PF00240.23 ORF137962 - 1.6e-29 101.5 6.1 1.4e-22 79.2 0.2 3.4 3 0 0 3 3 3 2 Ubiquitin family VWA_3 PF13768.6 ORF137962 - 7.3e-23 81.2 0.0 1.2e-22 80.5 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF137962 - 4.1e-20 72.1 0.1 2.4e-19 69.6 0.0 2.4 2 0 0 2 2 2 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF137962 - 3.4e-15 56.7 0.1 9.5e-15 55.3 0.1 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Rad60-SLD PF11976.8 ORF137962 - 1.1e-11 44.4 8.3 6.7e-08 32.2 0.2 4.1 5 0 0 5 5 5 2 Ubiquitin-2 like Rad60 SUMO-like VWA_2 PF13519.6 ORF137962 - 3.2e-09 37.4 0.0 9.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain Ubiquitin_5 PF18037.1 ORF137962 - 0.0011 19.3 4.8 0.12 12.7 0.3 3.4 3 0 0 3 3 3 2 Ubiquitin-like domain VIT_2 PF13757.6 ORF137962 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain Ubiquitin_4 PF18036.1 ORF137962 - 0.0046 17.0 1.8 6.3 6.9 0.0 4.0 3 1 0 3 3 3 1 Ubiquitin-like domain DUF2407 PF10302.9 ORF137962 - 0.037 14.6 0.3 2.4 8.8 0.0 3.3 2 1 0 3 3 3 0 DUF2407 ubiquitin-like domain Kelch_4 PF13418.6 ORF44468 - 2.3e-18 65.9 11.8 9e-06 25.6 0.4 6.3 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF44468 - 6.5e-14 51.6 3.2 0.00012 22.3 0.2 4.4 4 0 0 4 4 4 3 Kelch motif Kelch_5 PF13854.6 ORF44468 - 3.5e-13 49.2 1.6 0.00024 21.0 0.5 5.2 5 0 0 5 5 5 3 Kelch motif Kelch_2 PF07646.15 ORF44468 - 8.8e-12 44.5 8.0 2.5e-06 27.2 0.2 4.4 4 0 0 4 4 3 3 Kelch motif Kelch_1 PF01344.25 ORF44468 - 2.5e-10 39.8 6.4 7.6e-05 22.2 0.3 3.7 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 ORF44468 - 3.3e-10 40.0 4.6 0.00027 21.1 0.3 5.4 5 0 0 5 5 5 2 Galactose oxidase, central domain NCD3G PF07562.14 ORF44468 - 0.014 15.3 4.9 0.014 15.3 4.9 3.4 2 1 1 3 3 3 0 Nine Cysteines Domain of family 3 GPCR TMEM154 PF15102.6 ORF44468 - 0.077 12.9 0.6 0.15 11.9 0.6 1.4 1 0 0 1 1 1 0 TMEM154 protein family Birna_VP5 PF03042.14 ORF44468 - 0.087 12.8 0.1 16 5.5 0.0 2.5 2 0 0 2 2 2 0 Birnavirus VP5 protein Ephrin_rec_like PF07699.13 ORF44468 - 0.69 9.7 21.9 0.98 9.2 2.7 3.6 1 1 2 3 3 3 0 Putative ephrin-receptor like DUF3290 PF11694.8 ORF44468 - 1.6 8.7 5.7 0.22 11.5 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3290) AAA_12 PF13087.6 ORF60219 - 4.3e-57 193.0 0.3 1.2e-56 191.5 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_11 PF13086.6 ORF60219 - 1.1e-27 97.5 1.4 5.3e-20 72.3 0.3 4.3 3 1 1 4 4 4 2 AAA domain AAA_19 PF13245.6 ORF60219 - 1.1e-07 32.3 1.7 3e-06 27.6 0.0 2.9 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF60219 - 1.3e-07 31.6 0.0 1.3e-07 31.6 0.0 3.1 3 0 0 3 3 3 1 AAA domain WW PF00397.26 ORF60219 - 3.8e-07 30.1 2.4 6.1e-07 29.4 0.9 2.1 2 0 0 2 2 2 1 WW domain UvrD_C_2 PF13538.6 ORF60219 - 0.00014 21.6 0.3 0.0003 20.6 0.3 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 ORF60219 - 0.00044 20.0 0.8 0.26 11.0 0.0 3.5 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase AAA PF00004.29 ORF60219 - 0.0062 17.0 0.9 0.02 15.3 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF60219 - 0.0071 16.6 3.8 0.24 11.7 0.0 3.5 4 0 0 4 4 4 1 AAA domain Nrap_D6 PF17407.2 ORF60219 - 0.042 14.0 0.2 0.084 13.1 0.2 1.5 1 0 0 1 1 1 0 Nrap protein domain 6 AAA_25 PF13481.6 ORF60219 - 0.081 12.5 0.0 0.27 10.8 0.0 1.9 1 0 0 1 1 1 0 AAA domain TFIID-18kDa PF02269.16 ORF60219 - 0.14 12.2 0.3 0.5 10.4 0.3 1.9 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit CHASE4 PF05228.13 ORF60219 - 0.15 12.3 1.4 4 7.6 1.6 2.5 2 0 0 2 2 2 0 CHASE4 domain DUF2075 PF09848.9 ORF60219 - 0.28 10.4 0.0 0.28 10.4 0.0 3.5 4 0 0 4 4 4 0 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 ORF60219 - 0.57 10.5 0.0 0.57 10.5 0.0 2.8 3 1 0 3 3 3 0 AAA ATPase domain ATPase PF06745.13 ORF60219 - 0.59 9.4 0.0 0.59 9.4 0.0 2.3 3 0 0 3 3 3 0 KaiC DUF87 PF01935.17 ORF60219 - 0.84 9.7 8.3 4 7.5 1.3 3.0 3 0 0 3 3 3 0 Helicase HerA, central domain AAA_12 PF13087.6 ORF115803 - 4.3e-57 193.0 0.3 1.2e-56 191.5 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_11 PF13086.6 ORF115803 - 1.1e-27 97.5 1.4 5.3e-20 72.3 0.3 4.3 3 1 1 4 4 4 2 AAA domain AAA_19 PF13245.6 ORF115803 - 1.1e-07 32.3 1.7 3e-06 27.6 0.0 2.9 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF115803 - 1.3e-07 31.6 0.0 1.3e-07 31.6 0.0 3.1 3 0 0 3 3 3 1 AAA domain WW PF00397.26 ORF115803 - 3.8e-07 30.1 2.4 6.1e-07 29.4 0.9 2.1 2 0 0 2 2 2 1 WW domain UvrD_C_2 PF13538.6 ORF115803 - 0.00014 21.6 0.3 0.0003 20.6 0.3 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 ORF115803 - 0.00044 20.0 0.8 0.26 11.0 0.0 3.5 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase AAA PF00004.29 ORF115803 - 0.0062 17.0 0.9 0.02 15.3 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF115803 - 0.0071 16.6 3.8 0.24 11.7 0.0 3.5 4 0 0 4 4 4 1 AAA domain Nrap_D6 PF17407.2 ORF115803 - 0.042 14.0 0.2 0.084 13.1 0.2 1.5 1 0 0 1 1 1 0 Nrap protein domain 6 AAA_25 PF13481.6 ORF115803 - 0.081 12.5 0.0 0.27 10.8 0.0 1.9 1 0 0 1 1 1 0 AAA domain TFIID-18kDa PF02269.16 ORF115803 - 0.14 12.2 0.3 0.5 10.4 0.3 1.9 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit CHASE4 PF05228.13 ORF115803 - 0.15 12.3 1.4 4 7.6 1.6 2.5 2 0 0 2 2 2 0 CHASE4 domain DUF2075 PF09848.9 ORF115803 - 0.28 10.4 0.0 0.28 10.4 0.0 3.5 4 0 0 4 4 4 0 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 ORF115803 - 0.57 10.5 0.0 0.57 10.5 0.0 2.8 3 1 0 3 3 3 0 AAA ATPase domain ATPase PF06745.13 ORF115803 - 0.59 9.4 0.0 0.59 9.4 0.0 2.3 3 0 0 3 3 3 0 KaiC DUF87 PF01935.17 ORF115803 - 0.84 9.7 8.3 4 7.5 1.3 3.0 3 0 0 3 3 3 0 Helicase HerA, central domain Spc7 PF08317.11 ORF75136 - 0.00053 19.0 23.4 0.00053 19.0 23.4 7.1 3 2 4 7 7 7 4 Spc7 kinetochore protein VIT PF08487.10 ORF106502 - 4.4e-16 59.1 0.0 8.7e-16 58.1 0.0 1.5 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain PPC PF04151.15 ORF106502 - 0.087 13.9 0.1 0.64 11.2 0.0 2.5 2 0 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain E3_UbLigase_R4 PF13764.6 ORF96650 - 3.9e-118 395.8 31.5 4.9e-118 395.5 31.5 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 U62_UL91 PF17442.2 ORF96650 - 0.022 14.7 0.2 0.12 12.4 0.2 2.3 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins E3_UbLigase_R4 PF13764.6 ORF72860 - 3.9e-118 395.8 31.5 4.9e-118 395.5 31.5 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 U62_UL91 PF17442.2 ORF72860 - 0.022 14.7 0.2 0.12 12.4 0.2 2.3 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins E3_UbLigase_R4 PF13764.6 ORF103528 - 3.9e-118 395.8 31.5 4.9e-118 395.5 31.5 1.0 1 0 0 1 1 1 1 E3 ubiquitin-protein ligase UBR4 U62_UL91 PF17442.2 ORF103528 - 0.022 14.7 0.2 0.12 12.4 0.2 2.3 1 0 0 1 1 1 0 Functional domain of U62 and UL91 proteins HNH PF01844.23 ORF78656 - 2.1e-08 34.2 0.0 3.7e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 ORF78656 - 7.8e-05 22.5 0.5 0.00015 21.5 0.5 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH PF01844.23 ORF126038 - 1.4e-08 34.7 0.1 2.5e-08 33.9 0.1 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 ORF126038 - 0.0002 21.1 0.5 0.00039 20.2 0.5 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH PF01844.23 ORF97121 - 2.1e-08 34.2 0.0 3.7e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.6 ORF97121 - 7.8e-05 22.5 0.5 0.00015 21.5 0.5 1.4 1 0 0 1 1 1 1 HNH endonuclease Hydrolase_4 PF12146.8 ORF85529 - 0.008 15.5 0.1 0.072 12.3 0.0 2.2 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Arch_fla_DE PF04659.13 ORF85529 - 0.023 14.6 0.2 0.071 13.0 0.2 1.8 1 0 0 1 1 1 0 Archaeal flagella protein HXXEE PF13787.6 ORF85529 - 0.041 14.7 1.5 0.086 13.7 1.5 1.5 1 0 0 1 1 1 0 Protein of unknown function with HXXEE motif DHC_N1 PF08385.12 ORF82017 - 1.5e-74 251.7 24.2 1.5e-74 251.7 24.2 2.5 2 1 1 3 3 3 1 Dynein heavy chain, N-terminal region 1 EMC1_C PF07774.13 ORF60097 - 9e-42 143.2 0.8 4.6e-41 140.8 0.8 2.2 1 1 0 1 1 1 1 ER membrane protein complex subunit 1, C-terminal PQQ_2 PF13360.6 ORF60097 - 0.0016 18.1 0.0 0.7 9.4 0.0 2.9 3 0 0 3 3 3 2 PQQ-like domain CNH PF00780.22 ORF60097 - 0.027 14.1 0.2 0.42 10.2 0.0 2.6 2 0 0 2 2 2 0 CNH domain Peptidase_M1 PF01433.20 ORF34003 - 5.4e-58 196.1 5.3 1.6e-57 194.6 5.3 1.8 1 0 0 1 1 1 1 Peptidase family M1 domain ERAP1_C PF11838.8 ORF34003 - 5.2e-20 72.2 0.1 7.7e-20 71.7 0.1 1.3 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Peptidase_M1_N PF17900.1 ORF34003 - 3.8e-19 69.6 0.5 6.4e-17 62.3 0.2 2.7 2 0 0 2 2 2 2 Peptidase M1 N-terminal domain DUF2671 PF10877.8 ORF34003 - 0.21 11.4 2.7 0.94 9.3 0.3 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2671) tRNA-synt_1 PF00133.22 ORF32771 - 2.7e-235 782.2 0.0 3.2e-235 782.0 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF32771 - 2.2e-27 95.9 0.0 4.4e-27 94.9 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF32771 - 1.8e-19 69.8 0.1 2.1e-10 39.9 0.0 3.6 3 1 0 3 3 3 3 tRNA synthetases class I (M) zf-FPG_IleRS PF06827.14 ORF32771 - 1.8e-09 37.3 3.9 1.8e-09 37.3 3.9 2.6 3 0 0 3 3 3 1 Zinc finger found in FPG and IleRS tRNA-synt_1e PF01406.19 ORF32771 - 1.2e-08 34.7 0.0 3.1e-06 26.7 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 ORF32771 - 3.4e-07 30.0 0.0 6.3e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 ORF32771 - 3.3e-06 26.3 0.0 1.2e-05 24.4 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (K) PAPS_reduct PF01507.19 ORF32771 - 0.0031 17.6 0.0 2.2 8.3 0.0 2.4 2 0 0 2 2 2 2 Phosphoadenosine phosphosulfate reductase family 7tm_3 PF00003.22 ORF32398 - 0.0041 16.9 3.9 0.98 9.1 0.3 2.6 3 0 0 3 3 3 2 7 transmembrane sweet-taste receptor of 3 GCPR BCD PF15461.6 ORF32398 - 0.0075 15.8 0.4 0.0075 15.8 0.4 2.0 2 1 0 2 2 2 1 Beta-carotene 15,15'-dioxygenase DUF1345 PF07077.11 ORF32398 - 0.03 14.0 0.0 1.2 8.8 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1345) GAS2 PF02187.17 ORF91756 - 3.7e-07 30.1 0.0 1e-06 28.7 0.0 1.7 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain SlyX PF04102.12 ORF91756 - 3.6 8.3 21.3 7.3 7.3 0.8 6.1 4 1 2 6 6 6 0 SlyX FlaC_arch PF05377.11 ORF91756 - 7.4 7.1 19.8 5.3 7.5 2.2 6.4 6 0 0 6 6 6 0 Flagella accessory protein C (FlaC) SAPS PF04499.15 ORF150159 - 1.3e-14 53.9 16.8 8.2e-11 41.4 0.4 5.8 4 2 0 4 4 4 2 SIT4 phosphatase-associated protein GAS2 PF02187.17 ORF145693 - 3.7e-07 30.1 0.0 1e-06 28.7 0.0 1.7 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain SlyX PF04102.12 ORF145693 - 3.6 8.3 21.3 7.3 7.3 0.8 6.1 4 1 2 6 6 6 0 SlyX FlaC_arch PF05377.11 ORF145693 - 7.4 7.1 19.8 5.3 7.5 2.2 6.4 6 0 0 6 6 6 0 Flagella accessory protein C (FlaC) CTD PF12815.7 ORF72826 - 4.5e-05 23.9 10.2 0.028 15.0 10.2 3.1 1 1 0 1 1 1 1 Spt5 C-terminal nonapeptide repeat binding Spt4 Sortilin-Vps10 PF15902.5 ORF149606 - 1.9e-91 307.1 0.6 6.2e-48 163.7 0.0 2.2 2 0 0 2 2 2 2 Sortilin, neurotensin receptor 3, Sortilin_C PF15901.5 ORF149606 - 3.4e-41 141.4 7.8 5.6e-41 140.7 7.8 1.3 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal BNR PF02012.20 ORF149606 - 3.5e-05 23.2 15.6 0.29 11.3 0.1 6.5 6 0 0 6 6 6 3 BNR/Asp-box repeat BNR_6 PF15899.5 ORF149606 - 0.012 15.6 0.0 58 4.2 0.0 4.3 3 0 0 3 3 3 0 BNR-Asp box repeat E1-E2_ATPase PF00122.20 ORF130564 - 3.2e-45 153.9 0.8 1.2e-44 152.0 0.0 2.3 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 ORF130564 - 1.8e-33 116.6 0.0 3.1e-33 115.9 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 ORF130564 - 2.6e-08 34.2 4.4 2.5e-05 24.6 0.5 3.5 2 1 1 3 3 3 2 Heavy-metal-associated domain Hydrolase_3 PF08282.12 ORF130564 - 2.1e-05 24.4 6.0 0.00011 22.0 0.2 3.4 2 1 0 3 3 3 1 haloacid dehalogenase-like hydrolase DUF4119 PF13494.6 ORF130564 - 0.13 12.4 0.1 0.55 10.4 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF4119) DUF2417 PF10329.9 ORF130564 - 0.14 11.5 2.2 0.19 11.1 0.4 2.0 2 0 0 2 2 2 0 Region of unknown function (DUF2417) HAD PF12710.7 ORF130564 - 0.2 12.1 0.0 0.54 10.6 0.0 1.7 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Lipoprotein_22 PF17294.2 ORF130564 - 0.31 10.7 6.6 1.5 8.4 0.0 3.3 4 0 0 4 4 4 0 Uncharacterised lipoprotein family COX1 PF00115.20 ORF70302 - 2.2e-81 273.9 61.8 1.7e-63 215.0 47.3 2.1 2 0 0 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I PHM7_cyt PF14703.6 ORF17585 - 8.6e-14 52.1 10.3 8.6e-14 52.1 10.3 2.7 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter RSN1_7TM PF02714.15 ORF17585 - 0.00081 18.8 19.8 0.0017 17.7 0.8 4.1 3 1 1 4 4 4 2 Calcium-dependent channel, 7TM region, putative phosphate RRM_1 PF00076.22 ORF17585 - 0.0021 17.8 0.6 0.043 13.7 0.0 2.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Anoctamin PF04547.12 ORF17585 - 0.071 11.9 29.6 1.7 7.4 29.2 3.0 1 1 0 1 1 1 0 Calcium-activated chloride channel Yip1 PF04893.17 ORF17585 - 0.21 11.3 6.9 0.94 9.2 0.1 3.4 3 1 0 3 3 3 0 Yip1 domain COX1 PF00115.20 ORF147874 - 2.2e-81 273.9 61.8 1.7e-63 215.0 47.3 2.1 2 0 0 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I COX1 PF00115.20 ORF131149 - 2.2e-81 273.9 61.8 1.7e-63 215.0 47.3 2.1 2 0 0 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I COX1 PF00115.20 ORF108892 - 2.2e-81 273.9 61.8 1.7e-63 215.0 47.3 2.1 2 0 0 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I Glyco_hydro_31 PF01055.26 ORF108492 - 2.1e-126 422.7 9.3 2.1e-126 422.7 9.3 1.6 3 0 0 3 3 3 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 ORF108492 - 3e-06 27.5 0.2 8.5e-06 26.0 0.2 1.8 1 0 0 1 1 1 1 Galactose mutarotase-like NtCtMGAM_N PF16863.5 ORF108492 - 4.1e-05 23.8 0.0 0.00013 22.2 0.0 1.9 1 0 0 1 1 1 1 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase DUF5110 PF17137.4 ORF108492 - 0.0043 17.3 0.2 0.019 15.2 0.2 2.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) COX1 PF00115.20 ORF107088 - 2.2e-81 273.9 61.8 1.7e-63 215.0 47.3 2.1 2 0 0 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I DSHCT PF08148.12 ORF93587 - 1.5e-20 73.5 0.9 1.2e-19 70.5 0.0 2.4 2 0 0 2 2 2 1 DSHCT (NUC185) domain DEAD PF00270.29 ORF93587 - 6.8e-07 29.2 0.1 2.9e-06 27.2 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF93587 - 4.7e-06 26.9 0.3 6.8e-05 23.2 0.0 3.1 1 1 1 2 2 2 1 Helicase conserved C-terminal domain Y_phosphatase2 PF03162.13 ORF93587 - 0.078 12.5 3.8 0.089 12.4 0.7 2.7 2 0 0 2 2 2 0 Tyrosine phosphatase family DUF1910 PF08928.10 ORF93587 - 7.7 6.5 9.8 7.4 6.6 6.2 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF1910) TPR_1 PF00515.28 ORF45957 - 1.4e-40 135.5 46.4 6.7e-08 32.0 2.4 10.3 10 0 0 10 10 10 7 Tetratricopeptide repeat TPR_2 PF07719.17 ORF45957 - 2.6e-30 102.1 43.4 6.5e-06 25.9 1.7 9.2 10 0 0 10 10 9 7 Tetratricopeptide repeat TPR_11 PF13414.6 ORF45957 - 4.1e-19 68.0 27.0 8e-08 31.8 0.3 7.9 5 2 3 8 8 8 3 TPR repeat TPR_8 PF13181.6 ORF45957 - 1.1e-16 59.6 59.4 0.00014 21.8 2.0 10.4 12 0 0 12 12 9 6 Tetratricopeptide repeat TPR_9 PF13371.6 ORF45957 - 1e-14 54.4 0.0 0.00071 19.7 0.0 4.8 3 1 1 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 ORF45957 - 6e-13 48.5 1.2 0.46 11.4 0.0 7.3 6 1 1 7 7 7 2 Tetratricopeptide repeat RPAP3_C PF13877.6 ORF45957 - 1.4e-12 48.0 1.2 5e-12 46.2 0.1 2.7 3 0 0 3 3 2 1 Potential Monad-binding region of RPAP3 TPR_12 PF13424.6 ORF45957 - 4.5e-12 46.1 20.3 0.00023 21.4 0.2 8.2 7 2 1 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF45957 - 3.2e-11 43.7 0.3 0.15 12.7 0.0 6.2 5 1 0 6 6 6 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF45957 - 1.9e-09 37.3 18.6 0.013 15.8 0.8 7.1 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 ORF45957 - 1.8e-08 34.8 5.4 0.9 10.1 0.2 5.9 4 1 0 5 5 5 3 Tetratricopeptide repeat BTAD PF03704.17 ORF45957 - 8.5e-08 32.8 0.1 2.1 8.8 0.1 4.5 3 1 0 3 3 3 3 Bacterial transcriptional activator domain TPR_7 PF13176.6 ORF45957 - 2.2e-07 30.4 18.8 0.98 9.6 0.2 9.1 8 2 1 9 9 9 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF45957 - 3.5e-07 30.4 24.9 0.17 12.6 0.6 8.1 8 0 0 8 8 7 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF45957 - 5.6e-05 22.9 12.0 1.2 9.1 0.2 7.0 7 0 0 7 7 7 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF45957 - 0.00033 20.8 5.9 0.00033 20.8 5.9 4.6 4 1 1 5 5 4 1 Anaphase-promoting complex, cyclosome, subunit 3 DUF627 PF04781.12 ORF45957 - 0.025 14.6 7.2 0.97 9.5 0.1 3.8 3 1 0 3 3 3 0 Protein of unknown function (DUF627) SHNi-TPR PF10516.9 ORF45957 - 0.032 13.7 1.8 44 3.6 0.0 4.4 5 0 0 5 5 5 0 SHNi-TPR TPR_MalT PF17874.1 ORF45957 - 0.07 12.5 0.6 3.8 6.8 0.1 3.0 3 0 0 3 3 3 0 MalT-like TPR region DUF3856 PF12968.7 ORF45957 - 0.27 11.3 5.3 1.6 8.8 0.2 4.0 4 1 0 4 4 4 0 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.6 ORF45957 - 1.4 9.1 15.3 7.5 6.7 0.1 5.1 3 1 1 4 4 4 0 Fis1 C-terminal tetratricopeptide repeat RdDM_RDM1 PF09187.10 ORF45957 - 1.9 8.6 4.6 1.2 9.3 0.3 2.8 3 0 0 3 3 2 0 RNA-directed DNA methylation 1 DUF5113 PF17140.4 ORF45957 - 2.6 7.9 13.3 1.4 8.7 1.6 3.7 4 0 0 4 4 4 0 Domain of unknown function (DUF5113) zf-RING_14 PF17978.1 ORF58214 - 0.033 14.6 1.9 0.062 13.7 0.3 2.4 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Pkinase PF00069.25 ORF107603 - 1.8e-75 253.7 1.0 1.8e-75 253.7 1.0 2.0 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF107603 - 7.2e-45 153.3 0.3 1.5e-44 152.2 0.3 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF107603 - 1.7e-13 50.6 0.0 3e-13 49.7 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF107603 - 0.00011 21.6 0.6 0.00048 19.6 0.6 2.0 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family cwf21 PF08312.12 ORF107603 - 0.16 12.2 1.8 0.82 9.9 1.8 2.2 1 0 0 1 1 1 0 cwf21 domain Piezo_RRas_bdg PF12166.8 ORF57278 - 6.2e-77 259.7 5.0 6.2e-77 259.7 5.0 2.4 3 0 0 3 3 3 1 Piezo non-specific cation channel, R-Ras-binding domain DUF3899 PF13038.6 ORF57278 - 0.09 13.3 8.0 5.1 7.7 0.1 5.1 4 0 0 4 4 4 0 Domain of unknown function (DUF3899) RPN2_C PF18004.1 ORF86689 - 5.1e-39 133.8 9.3 8.7e-39 133.0 9.3 1.3 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN2 C-terminal domain PC_rep PF01851.22 ORF86689 - 1.8e-27 94.3 15.3 0.0032 17.8 0.0 7.8 7 0 0 7 7 7 7 Proteasome/cyclosome repeat HEAT_2 PF13646.6 ORF86689 - 2.7e-13 50.1 0.0 8.2e-12 45.4 0.0 2.9 2 0 0 2 2 2 1 HEAT repeats HEAT PF02985.22 ORF86689 - 0.00073 19.6 0.2 3.8 8.0 0.0 3.9 4 0 0 4 4 4 2 HEAT repeat DUF2812 PF11193.8 ORF86689 - 0.033 14.4 0.1 0.12 12.6 0.1 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2812) LpxD PF04613.14 ORF86689 - 0.07 12.9 0.0 0.18 11.6 0.0 1.7 1 0 0 1 1 1 0 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DUF1912 PF08930.10 ORF86689 - 0.24 11.6 1.2 12 6.1 0.3 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1912) DUF2344 PF10105.9 ORF86689 - 0.65 9.8 2.4 0.73 9.7 0.0 2.3 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2344) BRE1 PF08647.11 ORF66564 - 7.2e-09 35.6 17.5 7.2e-09 35.6 17.5 10.5 3 3 6 10 10 10 2 BRE1 E3 ubiquitin ligase CENP-F_leu_zip PF10473.9 ORF66564 - 0.012 15.6 13.5 0.012 15.6 13.5 9.8 1 1 7 9 9 9 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF99 PF01949.16 ORF66564 - 0.064 12.7 0.1 0.064 12.7 0.1 4.8 4 1 1 5 5 5 0 Protein of unknown function DUF99 PAS_11 PF14598.6 ORF123876 - 0.0057 16.8 0.1 0.05 13.7 0.0 2.4 2 0 0 2 2 2 1 PAS domain RVT_2 PF07727.14 ORF9720 - 2.8e-17 63.2 0.0 7.5e-16 58.5 0.0 2.1 2 0 0 2 2 2 2 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_2 PF07727.14 ORF88348 - 2.8e-17 63.2 0.0 7.5e-16 58.5 0.0 2.1 2 0 0 2 2 2 2 Reverse transcriptase (RNA-dependent DNA polymerase) ABC_tran PF00005.27 ORF6412 - 4.8e-72 240.9 2.7 8.1e-38 130.0 0.1 3.0 3 0 0 3 3 2 2 ABC transporter ABC_membrane PF00664.23 ORF6412 - 1e-47 163.1 10.0 1e-47 163.1 10.0 1.7 2 0 0 2 2 2 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF6412 - 1.1e-12 47.9 18.9 1e-05 25.1 5.2 4.1 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF6412 - 2.9e-09 37.6 0.1 0.0019 18.6 0.0 2.7 2 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 ORF6412 - 5.3e-08 33.2 2.9 0.0027 18.0 0.2 4.0 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.6 ORF6412 - 2.7e-07 30.2 1.3 0.0089 15.7 0.2 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF6412 - 4.4e-07 29.9 12.6 0.0023 17.7 1.7 3.1 2 1 0 2 2 2 2 AAA ATPase domain AAA PF00004.29 ORF6412 - 6.3e-07 29.9 4.6 0.022 15.2 0.4 4.4 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 ORF6412 - 9.7e-07 28.8 0.0 0.038 13.9 0.0 2.9 2 0 0 2 2 2 2 RsgA GTPase AAA_30 PF13604.6 ORF6412 - 3.4e-06 26.9 0.1 0.019 14.7 0.2 3.5 2 2 0 2 2 2 1 AAA domain AAA_21 PF13304.6 ORF6412 - 6.6e-06 26.1 1.1 0.024 14.4 0.4 2.9 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 ORF6412 - 6.8e-06 25.8 0.5 0.28 10.7 0.0 3.7 4 0 0 4 4 4 2 AAA domain Rad17 PF03215.15 ORF6412 - 1.1e-05 25.5 0.0 0.022 14.7 0.0 3.0 2 0 0 2 2 2 2 Rad17 P-loop domain G-alpha PF00503.20 ORF6412 - 1.4e-05 24.4 0.9 0.11 11.7 0.1 2.4 2 0 0 2 2 2 2 G-protein alpha subunit AAA_5 PF07728.14 ORF6412 - 5.8e-05 23.1 0.3 0.38 10.7 0.0 3.8 4 1 1 5 5 4 2 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF6412 - 6.8e-05 23.4 0.1 0.89 10.1 0.0 3.8 4 0 0 4 4 2 2 AAA domain Zeta_toxin PF06414.12 ORF6412 - 9.7e-05 21.7 0.0 0.36 10.1 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin PRK PF00485.18 ORF6412 - 0.00021 21.1 0.0 0.14 11.8 0.0 3.3 3 0 0 3 3 3 1 Phosphoribulokinase / Uridine kinase family SbcCD_C PF13558.6 ORF6412 - 0.00027 21.1 5.8 0.21 11.9 0.3 4.1 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit RNA_helicase PF00910.22 ORF6412 - 0.00036 20.9 0.0 1.5 9.2 0.0 3.1 2 0 0 2 2 2 2 RNA helicase AAA_7 PF12775.7 ORF6412 - 0.00037 20.0 0.0 0.29 10.6 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region APS_kinase PF01583.20 ORF6412 - 0.0011 18.9 0.0 0.35 10.8 0.0 2.5 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA_14 PF13173.6 ORF6412 - 0.0033 17.4 0.7 2.2 8.4 0.1 3.6 2 2 1 3 3 3 1 AAA domain NB-ARC PF00931.22 ORF6412 - 0.004 16.4 0.0 2.2 7.4 0.0 2.6 2 0 0 2 2 2 1 NB-ARC domain AAA_33 PF13671.6 ORF6412 - 0.0069 16.5 0.0 0.39 10.9 0.0 2.7 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 ORF6412 - 0.018 14.7 0.0 5.6 6.6 0.0 2.9 3 0 0 3 3 2 0 Sigma-54 interaction domain HCO3_cotransp PF00955.21 ORF6412 - 0.022 13.6 1.4 0.03 13.1 0.1 1.8 2 0 0 2 2 2 0 HCO3- transporter family MMR_HSR1 PF01926.23 ORF6412 - 0.037 14.1 0.0 4.6 7.3 0.0 3.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase Cytidylate_kin PF02224.18 ORF6412 - 0.039 13.7 0.0 1.6 8.4 0.0 2.7 2 0 0 2 2 2 0 Cytidylate kinase NTPase_1 PF03266.15 ORF6412 - 0.058 13.3 5.2 13 5.7 0.0 3.9 4 0 0 4 4 4 0 NTPase ATP_bind_1 PF03029.17 ORF6412 - 0.062 13.1 0.0 3.8 7.2 0.0 2.6 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein UPF0542 PF15086.6 ORF6412 - 0.12 12.4 0.3 0.4 10.7 0.0 2.0 2 0 0 2 2 1 0 Uncharacterised protein family UPF0542 AAA_24 PF13479.6 ORF6412 - 0.14 11.8 2.2 14 5.3 0.1 3.2 2 2 0 3 3 3 0 AAA domain DUF4023 PF13215.6 ORF6412 - 0.15 12.1 0.9 0.33 11.0 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4023) FpoO PF10621.9 ORF6412 - 0.17 12.2 0.0 1 9.7 0.0 2.1 2 0 0 2 2 2 0 F420H2 dehydrogenase subunit FpoO AAA_17 PF13207.6 ORF6412 - 0.33 11.4 6.3 9.2 6.7 0.0 4.1 4 0 0 4 4 4 0 AAA domain PhoH PF02562.16 ORF6412 - 0.35 10.3 3.3 25 4.2 0.0 3.4 3 0 0 3 3 3 0 PhoH-like protein CC2-LZ PF16516.5 ORF6412 - 0.66 10.4 7.9 0.74 10.2 0.3 2.6 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator ABC_tran PF00005.27 ORF29773 - 4.8e-72 240.9 2.7 8.1e-38 130.0 0.1 3.0 3 0 0 3 3 2 2 ABC transporter ABC_membrane PF00664.23 ORF29773 - 1e-47 163.1 10.0 1e-47 163.1 10.0 1.7 2 0 0 2 2 2 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF29773 - 1.1e-12 47.9 18.9 1e-05 25.1 5.2 4.1 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF29773 - 2.9e-09 37.6 0.1 0.0019 18.6 0.0 2.7 2 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 ORF29773 - 5.3e-08 33.2 2.9 0.0027 18.0 0.2 4.0 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.6 ORF29773 - 2.7e-07 30.2 1.3 0.0089 15.7 0.2 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF29773 - 4.4e-07 29.9 12.6 0.0023 17.7 1.7 3.1 2 1 0 2 2 2 2 AAA ATPase domain AAA PF00004.29 ORF29773 - 6.3e-07 29.9 4.6 0.022 15.2 0.4 4.4 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 ORF29773 - 9.7e-07 28.8 0.0 0.038 13.9 0.0 2.9 2 0 0 2 2 2 2 RsgA GTPase AAA_30 PF13604.6 ORF29773 - 3.4e-06 26.9 0.1 0.019 14.7 0.2 3.5 2 2 0 2 2 2 1 AAA domain AAA_21 PF13304.6 ORF29773 - 6.6e-06 26.1 1.1 0.024 14.4 0.4 2.9 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 ORF29773 - 6.8e-06 25.8 0.5 0.28 10.7 0.0 3.7 4 0 0 4 4 4 2 AAA domain Rad17 PF03215.15 ORF29773 - 1.1e-05 25.5 0.0 0.022 14.7 0.0 3.0 2 0 0 2 2 2 2 Rad17 P-loop domain G-alpha PF00503.20 ORF29773 - 1.4e-05 24.4 0.9 0.11 11.7 0.1 2.4 2 0 0 2 2 2 2 G-protein alpha subunit AAA_5 PF07728.14 ORF29773 - 5.8e-05 23.1 0.3 0.38 10.7 0.0 3.8 4 1 1 5 5 4 2 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF29773 - 6.8e-05 23.4 0.1 0.89 10.1 0.0 3.8 4 0 0 4 4 2 2 AAA domain Zeta_toxin PF06414.12 ORF29773 - 9.7e-05 21.7 0.0 0.36 10.1 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin PRK PF00485.18 ORF29773 - 0.00021 21.1 0.0 0.14 11.8 0.0 3.3 3 0 0 3 3 3 1 Phosphoribulokinase / Uridine kinase family SbcCD_C PF13558.6 ORF29773 - 0.00027 21.1 5.8 0.21 11.9 0.3 4.1 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit RNA_helicase PF00910.22 ORF29773 - 0.00036 20.9 0.0 1.5 9.2 0.0 3.1 2 0 0 2 2 2 2 RNA helicase AAA_7 PF12775.7 ORF29773 - 0.00037 20.0 0.0 0.29 10.6 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region APS_kinase PF01583.20 ORF29773 - 0.0011 18.9 0.0 0.35 10.8 0.0 2.5 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA_14 PF13173.6 ORF29773 - 0.0033 17.4 0.7 2.2 8.4 0.1 3.6 2 2 1 3 3 3 1 AAA domain NB-ARC PF00931.22 ORF29773 - 0.004 16.4 0.0 2.2 7.4 0.0 2.6 2 0 0 2 2 2 1 NB-ARC domain AAA_33 PF13671.6 ORF29773 - 0.0069 16.5 0.0 0.39 10.9 0.0 2.7 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 ORF29773 - 0.018 14.7 0.0 5.6 6.6 0.0 2.9 3 0 0 3 3 2 0 Sigma-54 interaction domain HCO3_cotransp PF00955.21 ORF29773 - 0.022 13.6 1.4 0.03 13.1 0.1 1.8 2 0 0 2 2 2 0 HCO3- transporter family MMR_HSR1 PF01926.23 ORF29773 - 0.037 14.1 0.0 4.6 7.3 0.0 3.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase Cytidylate_kin PF02224.18 ORF29773 - 0.039 13.7 0.0 1.6 8.4 0.0 2.7 2 0 0 2 2 2 0 Cytidylate kinase NTPase_1 PF03266.15 ORF29773 - 0.058 13.3 5.2 13 5.7 0.0 3.9 4 0 0 4 4 4 0 NTPase ATP_bind_1 PF03029.17 ORF29773 - 0.062 13.1 0.0 3.8 7.2 0.0 2.6 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein UPF0542 PF15086.6 ORF29773 - 0.12 12.4 0.3 0.4 10.7 0.0 2.0 2 0 0 2 2 1 0 Uncharacterised protein family UPF0542 AAA_24 PF13479.6 ORF29773 - 0.14 11.8 2.2 14 5.3 0.1 3.2 2 2 0 3 3 3 0 AAA domain DUF4023 PF13215.6 ORF29773 - 0.15 12.1 0.9 0.33 11.0 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4023) FpoO PF10621.9 ORF29773 - 0.17 12.2 0.0 1 9.7 0.0 2.1 2 0 0 2 2 2 0 F420H2 dehydrogenase subunit FpoO AAA_17 PF13207.6 ORF29773 - 0.33 11.4 6.3 9.2 6.7 0.0 4.1 4 0 0 4 4 4 0 AAA domain PhoH PF02562.16 ORF29773 - 0.35 10.3 3.3 25 4.2 0.0 3.4 3 0 0 3 3 3 0 PhoH-like protein CC2-LZ PF16516.5 ORF29773 - 0.66 10.4 7.9 0.74 10.2 0.3 2.6 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator RVT_2 PF07727.14 ORF111112 - 2.8e-17 63.2 0.0 7.5e-16 58.5 0.0 2.1 2 0 0 2 2 2 2 Reverse transcriptase (RNA-dependent DNA polymerase) Rieske_2 PF13806.6 ORF109811 - 4.3e-20 71.6 0.0 9.1e-20 70.5 0.0 1.6 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Pyr_redox_2 PF07992.14 ORF109811 - 1.1e-18 67.5 0.0 1.9e-18 66.7 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR PF01077.22 ORF109811 - 4.1e-16 58.9 0.0 7e-16 58.1 0.0 1.4 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Fer2_BFD PF04324.15 ORF109811 - 3e-10 40.3 11.5 5.8e-09 36.2 10.6 2.8 2 0 0 2 2 2 1 BFD-like [2Fe-2S] binding domain NIR_SIR_ferr PF03460.17 ORF109811 - 2.5e-07 30.5 0.1 6.9e-07 29.0 0.0 1.8 2 0 0 2 2 2 1 Nitrite/Sulfite reductase ferredoxin-like half domain Rubredoxin_C PF18267.1 ORF109811 - 4e-06 26.7 0.0 1.8e-05 24.6 0.0 2.2 1 1 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain Pyr_redox PF00070.27 ORF109811 - 6.9e-06 26.5 0.0 1.7e-05 25.3 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rieske PF00355.26 ORF109811 - 0.022 14.7 0.0 0.051 13.5 0.0 1.6 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain FKBP26_C PF18046.1 ORF109811 - 0.033 14.3 0.0 0.075 13.1 0.0 1.5 1 0 0 1 1 1 0 FKBP26_C-terminal Pkinase_Tyr PF07714.17 ORF148094 - 8.3e-13 48.2 0.0 1.7e-12 47.2 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF148094 - 2.7e-12 46.6 0.0 9.6e-12 44.8 0.0 1.9 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF148094 - 0.0018 18.3 0.2 0.0018 18.3 0.2 2.8 2 1 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF148094 - 0.035 13.5 0.1 0.07 12.5 0.1 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF148094 - 0.14 10.9 0.1 0.14 10.9 0.1 2.7 2 1 0 2 2 2 0 Fungal protein kinase Cbl_N PF02262.16 ORF53622 - 10 6.2 11.3 0.42 10.6 0.4 3.7 3 1 0 3 3 3 0 CBL proto-oncogene N-terminal domain 1 Guanylate_cyc PF00211.20 ORF143938 - 2.1e-14 53.6 0.0 5.5e-14 52.2 0.0 1.7 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain Ephrin_rec_like PF07699.13 ORF107871 - 0.011 15.4 9.7 0.11 12.2 3.4 2.8 2 0 0 2 2 2 0 Putative ephrin-receptor like Sp38 PF07354.12 ORF107871 - 0.034 13.6 12.5 0.041 13.3 2.4 2.4 2 0 0 2 2 2 0 Zona-pellucida-binding protein (Sp38) Adipogenin PF15202.6 ORF107871 - 0.57 10.2 11.2 0.24 11.4 0.5 3.6 4 0 0 4 4 4 0 Adipogenin TNFR_c6 PF00020.18 ORF107871 - 2.9 8.4 10.7 0.71 10.3 0.1 3.8 2 2 1 3 3 3 0 TNFR/NGFR cysteine-rich region F-box PF00646.33 ORF118374 - 0.07 13.0 0.0 0.31 11.0 0.0 2.1 1 0 0 1 1 1 0 F-box domain cNMP_binding PF00027.29 ORF19394 - 2.3e-29 101.3 0.0 9.1e-17 60.9 0.0 2.4 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Ion_trans PF00520.31 ORF19394 - 1.4e-19 70.3 15.9 2.1e-19 69.7 15.9 1.2 1 0 0 1 1 1 1 Ion transport protein VIT PF08487.10 ORF102435 - 1.1e-22 80.4 0.1 3.5e-22 78.7 0.1 2.0 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VWA_3 PF13768.6 ORF102435 - 3.8e-22 78.9 0.0 6.6e-22 78.1 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF102435 - 3e-12 47.1 0.0 6.9e-12 46.0 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF102435 - 8e-12 45.8 2.8 1.8e-11 44.6 0.3 2.6 3 0 0 3 3 3 1 von Willebrand factor type A domain CENP-T_C PF15511.6 ORF102435 - 3.2e-07 30.4 0.0 9.4e-07 28.9 0.0 1.7 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold vWA-TerF-like PF10138.9 ORF102435 - 3.2e-05 24.1 0.1 0.00013 22.2 0.0 1.9 2 0 0 2 2 2 1 vWA found in TerF C terminus VIT_2 PF13757.6 ORF102435 - 0.0015 18.4 0.0 0.0039 17.0 0.0 1.8 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain CBFD_NFYB_HMF PF00808.23 ORF102435 - 0.0042 17.3 0.0 0.017 15.4 0.0 2.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 ORF102435 - 0.0061 16.6 0.0 0.02 15.0 0.0 1.9 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit CENP-S PF15630.6 ORF102435 - 0.024 15.0 0.0 0.077 13.4 0.0 1.9 1 0 0 1 1 1 0 CENP-S protein ABC2_membrane_3 PF12698.7 ORF102435 - 0.12 11.4 0.5 0.31 10.1 0.5 1.7 1 0 0 1 1 1 0 ABC-2 family transporter protein TAF PF02969.17 ORF102435 - 0.16 12.2 0.3 0.51 10.5 0.0 2.0 2 0 0 2 2 2 0 TATA box binding protein associated factor (TAF) Patched PF02460.18 ORF50169 - 5.8e-68 229.8 24.4 7.4e-67 226.1 24.4 2.4 1 1 0 1 1 1 1 Patched family Sterol-sensing PF12349.8 ORF50169 - 2.4e-49 167.1 5.3 2.4e-49 167.1 5.3 2.9 2 0 0 2 2 2 1 Sterol-sensing domain of SREBP cleavage-activation MMPL PF03176.15 ORF50169 - 1.1e-11 44.3 1.0 1.1e-11 44.3 1.0 2.9 3 0 0 3 3 3 1 MMPL family CRM1_C PF08767.11 ORF146896 - 9e-94 314.2 16.4 9e-94 314.2 16.4 2.6 3 1 0 3 3 3 1 CRM1 C terminal CRM1_repeat_2 PF18784.1 ORF146896 - 4.4e-23 80.7 0.6 4.1e-22 77.6 0.5 2.7 2 0 0 2 2 2 1 CRM1 / Exportin repeat 2 CRM1_repeat_3 PF18787.1 ORF146896 - 8.8e-21 73.8 3.8 2.3e-20 72.4 0.9 3.0 3 0 0 3 3 3 1 CRM1 / Exportin repeat 3 CRM1_repeat PF18777.1 ORF146896 - 3.3e-09 36.1 3.1 1.6e-08 33.9 0.1 3.2 3 0 0 3 3 3 1 Chromosome region maintenance or exportin repeat Xpo1 PF08389.12 ORF146896 - 2.7e-07 30.8 14.0 1.1e-06 28.8 0.0 5.5 4 2 1 6 6 6 2 Exportin 1-like protein CLASP_N PF12348.8 ORF146896 - 0.036 13.6 3.0 7.8 6.0 0.0 3.7 4 0 0 4 4 4 0 CLASP N terminal DUF3385 PF11865.8 ORF146896 - 0.23 11.3 7.7 0.42 10.5 0.0 3.8 3 1 1 4 4 4 0 Domain of unknown function (DUF3385) Ral PF11058.8 ORF146896 - 0.3 10.7 1.6 0.95 9.1 0.2 2.3 2 0 0 2 2 2 0 Antirestriction protein Ral UCH PF00443.29 ORF77968 - 9.5e-70 235.0 0.0 1.9e-68 230.8 0.0 2.2 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF77968 - 2.7e-13 50.2 10.3 1.8e-07 31.0 1.3 4.2 2 2 1 3 3 3 2 Ubiquitin carboxyl-terminal hydrolase ERGIC_N PF13850.6 ORF129499 - 0.048 14.0 0.2 1.2 9.5 0.1 2.6 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) AAA PF00004.29 ORF80897 - 1.9e-16 60.7 0.0 5.4e-16 59.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF80897 - 0.00015 22.2 0.0 0.00064 20.1 0.0 2.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF80897 - 0.00029 20.9 0.0 0.0007 19.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF80897 - 0.00038 20.2 0.0 0.00095 18.9 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 ORF80897 - 0.00039 20.6 0.0 0.0016 18.6 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF80897 - 0.0012 19.2 0.0 0.041 14.2 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF80897 - 0.0044 16.3 0.0 0.011 15.0 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF80897 - 0.0062 16.2 0.1 0.083 12.5 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF80897 - 0.0089 16.6 0.0 0.052 14.1 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF80897 - 0.014 15.0 0.0 0.14 11.8 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF80897 - 0.016 15.0 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF80897 - 0.026 13.9 0.0 0.049 13.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF80897 - 0.028 14.1 0.0 0.028 14.1 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF80897 - 0.03 14.7 0.0 0.097 13.1 0.0 1.9 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF80897 - 0.03 14.0 0.0 0.068 12.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF80897 - 0.038 13.1 0.0 0.093 11.8 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF80897 - 0.078 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF80897 - 0.097 12.4 0.0 0.097 12.4 0.0 3.8 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF80897 - 0.098 12.2 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF80897 - 0.16 11.8 0.8 1.2 9.1 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA PF00004.29 ORF56978 - 1.9e-16 60.7 0.0 5.4e-16 59.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF56978 - 0.00015 22.2 0.0 0.00064 20.1 0.0 2.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF56978 - 0.00029 20.9 0.0 0.0007 19.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF56978 - 0.00038 20.2 0.0 0.00095 18.9 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 ORF56978 - 0.00039 20.6 0.0 0.0016 18.6 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF56978 - 0.0012 19.2 0.0 0.041 14.2 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF56978 - 0.0044 16.3 0.0 0.011 15.0 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF56978 - 0.0062 16.2 0.1 0.083 12.5 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF56978 - 0.0089 16.6 0.0 0.052 14.1 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF56978 - 0.014 15.0 0.0 0.14 11.8 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF56978 - 0.016 15.0 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF56978 - 0.026 13.9 0.0 0.049 13.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF56978 - 0.028 14.1 0.0 0.028 14.1 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF56978 - 0.03 14.7 0.0 0.097 13.1 0.0 1.9 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF56978 - 0.03 14.0 0.0 0.068 12.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF56978 - 0.038 13.1 0.0 0.093 11.8 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF56978 - 0.078 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF56978 - 0.097 12.4 0.0 0.097 12.4 0.0 3.8 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF56978 - 0.098 12.2 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF56978 - 0.16 11.8 0.8 1.2 9.1 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA PF00004.29 ORF56478 - 1.9e-16 60.7 0.0 5.4e-16 59.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF56478 - 0.00015 22.2 0.0 0.00064 20.1 0.0 2.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF56478 - 0.00029 20.9 0.0 0.0007 19.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF56478 - 0.00038 20.2 0.0 0.00095 18.9 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 ORF56478 - 0.00039 20.6 0.0 0.0016 18.6 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF56478 - 0.0012 19.2 0.0 0.041 14.2 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF56478 - 0.0044 16.3 0.0 0.011 15.0 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF56478 - 0.0062 16.2 0.1 0.083 12.5 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF56478 - 0.0089 16.6 0.0 0.052 14.1 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF56478 - 0.014 15.0 0.0 0.14 11.8 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF56478 - 0.016 15.0 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF56478 - 0.026 13.9 0.0 0.049 13.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF56478 - 0.028 14.1 0.0 0.028 14.1 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF56478 - 0.03 14.7 0.0 0.097 13.1 0.0 1.9 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF56478 - 0.03 14.0 0.0 0.068 12.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF56478 - 0.038 13.1 0.0 0.093 11.8 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF56478 - 0.078 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF56478 - 0.097 12.4 0.0 0.097 12.4 0.0 3.8 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF56478 - 0.098 12.2 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF56478 - 0.16 11.8 0.8 1.2 9.1 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA PF00004.29 ORF54152 - 1.9e-16 60.7 0.0 5.4e-16 59.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF54152 - 0.00015 22.2 0.0 0.00064 20.1 0.0 2.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF54152 - 0.00029 20.9 0.0 0.0007 19.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF54152 - 0.00038 20.2 0.0 0.00095 18.9 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 ORF54152 - 0.00039 20.6 0.0 0.0016 18.6 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF54152 - 0.0012 19.2 0.0 0.041 14.2 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF54152 - 0.0044 16.3 0.0 0.011 15.0 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF54152 - 0.0062 16.2 0.1 0.083 12.5 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF54152 - 0.0089 16.6 0.0 0.052 14.1 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF54152 - 0.014 15.0 0.0 0.14 11.8 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF54152 - 0.016 15.0 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF54152 - 0.026 13.9 0.0 0.049 13.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF54152 - 0.028 14.1 0.0 0.028 14.1 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF54152 - 0.03 14.7 0.0 0.097 13.1 0.0 1.9 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF54152 - 0.03 14.0 0.0 0.068 12.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF54152 - 0.038 13.1 0.0 0.093 11.8 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF54152 - 0.078 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF54152 - 0.097 12.4 0.0 0.097 12.4 0.0 3.8 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF54152 - 0.098 12.2 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF54152 - 0.16 11.8 0.8 1.2 9.1 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif Adaptin_N PF01602.20 ORF53233 - 2.6e-65 221.0 9.1 3.7e-65 220.5 9.1 1.2 1 0 0 1 1 1 1 Adaptin N terminal region Coatomer_b_Cpla PF14806.6 ORF53233 - 7.7e-45 152.0 1.4 1.7e-44 150.9 0.4 2.2 2 1 0 2 2 2 1 Coatomer beta subunit appendage platform Coatamer_beta_C PF07718.12 ORF53233 - 3.9e-44 150.0 0.0 9.5e-44 148.7 0.0 1.7 1 0 0 1 1 1 1 Coatomer beta C-terminal region Cnd1 PF12717.7 ORF53233 - 0.00014 22.0 6.2 0.042 13.9 0.1 3.6 2 1 1 4 4 4 2 non-SMC mitotic condensation complex subunit 1 RTP1_C1 PF10363.9 ORF53233 - 0.012 15.8 0.3 0.31 11.3 0.0 3.0 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF4476 PF14771.6 ORF53233 - 0.022 15.1 0.4 0.13 12.6 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4476) fn3_5 PF06280.12 ORF53233 - 0.026 15.2 0.1 0.088 13.5 0.1 1.9 1 0 0 1 1 1 0 Fn3-like domain DUF5578 PF17741.1 ORF53233 - 0.038 13.4 2.4 0.27 10.6 0.4 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5578) C_Hendra PF16821.5 ORF53233 - 0.11 12.3 3.1 7.7 6.4 0.1 2.8 3 0 0 3 3 3 0 C protein from hendra and measles viruses AAA PF00004.29 ORF147568 - 1.9e-16 60.7 0.0 5.4e-16 59.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF147568 - 0.00015 22.2 0.0 0.00064 20.1 0.0 2.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF147568 - 0.00029 20.9 0.0 0.0007 19.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF147568 - 0.00038 20.2 0.0 0.00095 18.9 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 ORF147568 - 0.00039 20.6 0.0 0.0016 18.6 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF147568 - 0.0012 19.2 0.0 0.041 14.2 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF147568 - 0.0044 16.3 0.0 0.011 15.0 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF147568 - 0.0062 16.2 0.1 0.083 12.5 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF147568 - 0.0089 16.6 0.0 0.052 14.1 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF147568 - 0.014 15.0 0.0 0.14 11.8 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF147568 - 0.016 15.0 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF147568 - 0.026 13.9 0.0 0.049 13.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF147568 - 0.028 14.1 0.0 0.028 14.1 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF147568 - 0.03 14.7 0.0 0.097 13.1 0.0 1.9 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF147568 - 0.03 14.0 0.0 0.068 12.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF147568 - 0.038 13.1 0.0 0.093 11.8 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF147568 - 0.078 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF147568 - 0.097 12.4 0.0 0.097 12.4 0.0 3.8 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF147568 - 0.098 12.2 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF147568 - 0.16 11.8 0.8 1.2 9.1 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif AAA PF00004.29 ORF133827 - 1.9e-16 60.7 0.0 5.4e-16 59.2 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF133827 - 0.00015 22.2 0.0 0.00064 20.1 0.0 2.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF133827 - 0.00029 20.9 0.0 0.0007 19.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 ORF133827 - 0.00038 20.2 0.0 0.00095 18.9 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 ORF133827 - 0.00039 20.6 0.0 0.0016 18.6 0.0 2.1 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 ORF133827 - 0.0012 19.2 0.0 0.041 14.2 0.0 3.1 2 1 0 3 3 3 1 AAA domain TIP49 PF06068.13 ORF133827 - 0.0044 16.3 0.0 0.011 15.0 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain Zot PF05707.12 ORF133827 - 0.0062 16.2 0.1 0.083 12.5 0.1 2.3 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_18 PF13238.6 ORF133827 - 0.0089 16.6 0.0 0.052 14.1 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF133827 - 0.014 15.0 0.0 0.14 11.8 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 ORF133827 - 0.016 15.0 0.0 0.032 14.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 ORF133827 - 0.026 13.9 0.0 0.049 13.0 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF133827 - 0.028 14.1 0.0 0.028 14.1 0.0 3.0 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 ORF133827 - 0.03 14.7 0.0 0.097 13.1 0.0 1.9 1 0 0 1 1 1 0 RNA helicase Sigma54_activat PF00158.26 ORF133827 - 0.03 14.0 0.0 0.068 12.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain Parvo_NS1 PF01057.17 ORF133827 - 0.038 13.1 0.0 0.093 11.8 0.0 1.6 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Sigma54_activ_2 PF14532.6 ORF133827 - 0.078 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_11 PF13086.6 ORF133827 - 0.097 12.4 0.0 0.097 12.4 0.0 3.8 2 1 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF133827 - 0.098 12.2 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region IQ PF00612.27 ORF133827 - 0.16 11.8 0.8 1.2 9.1 0.0 2.4 2 0 0 2 2 2 0 IQ calmodulin-binding motif PLD_C PF12357.8 ORF79147 - 0.081 12.8 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 Phospholipase D C terminal DUF3584 PF12128.8 ORF21711 - 0.00048 17.8 36.6 0.00048 17.8 36.6 3.4 1 1 2 3 3 3 2 Protein of unknown function (DUF3584) Fez1 PF06818.15 ORF21711 - 0.003 18.0 14.6 0.003 18.0 14.6 6.8 1 1 5 6 6 6 2 Fez1 Styelin PF17562.2 ORF21711 - 0.0063 16.8 2.8 0.017 15.5 1.1 2.7 2 0 0 2 2 2 1 Styelin PIP5K PF01504.18 ORF95256 - 2.2e-42 145.2 0.0 7.7e-41 140.1 0.0 2.3 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase DUF900 PF05990.12 ORF95256 - 1.9e-09 37.4 0.0 3.1e-09 36.7 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_6 PF12697.7 ORF95256 - 0.00042 21.0 2.5 0.00056 20.6 1.1 1.9 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_8 PF06259.12 ORF95256 - 0.0035 17.0 0.0 0.0075 15.9 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase LIDHydrolase PF10230.9 ORF95256 - 0.02 14.4 0.0 0.043 13.4 0.0 1.5 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase DUF726 PF05277.12 ORF95256 - 0.025 13.5 0.0 0.042 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Ser_hydrolase PF06821.13 ORF95256 - 0.043 13.7 0.1 0.076 12.9 0.1 1.3 1 0 0 1 1 1 0 Serine hydrolase Lipase_3 PF01764.25 ORF95256 - 0.11 12.3 0.1 0.26 11.1 0.1 1.6 1 0 0 1 1 1 0 Lipase (class 3) AAA_12 PF13087.6 ORF42285 - 2.3e-48 164.4 0.0 5.7e-48 163.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 ORF42285 - 2.8e-36 125.6 0.9 1.1e-19 71.2 0.3 2.5 1 1 1 2 2 2 2 AAA domain AAA_30 PF13604.6 ORF42285 - 2.2e-12 47.1 0.2 1.6e-11 44.3 0.2 2.2 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 ORF42285 - 8e-10 39.2 0.1 4.6e-09 36.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain WW PF00397.26 ORF42285 - 1.1e-06 28.6 9.2 2.7e-06 27.4 9.2 1.6 1 0 0 1 1 1 1 WW domain Viral_helicase1 PF01443.18 ORF42285 - 2.8e-05 24.0 0.0 0.0042 16.8 0.0 3.0 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.9 ORF42285 - 0.0013 18.1 0.1 0.31 10.2 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 ORF42285 - 0.0036 17.2 0.0 0.043 13.7 0.0 2.7 3 0 0 3 3 3 1 NACHT domain DEAD PF00270.29 ORF42285 - 0.0037 17.1 0.0 0.011 15.5 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase PhoH PF02562.16 ORF42285 - 0.0055 16.2 0.0 0.023 14.1 0.0 1.9 2 0 0 2 2 2 1 PhoH-like protein IstB_IS21 PF01695.17 ORF42285 - 0.012 15.4 0.0 0.028 14.2 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA PF00004.29 ORF42285 - 0.017 15.5 0.0 0.038 14.4 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 ORF42285 - 0.026 14.1 0.0 0.066 12.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain V-ATPase_G_2 PF16999.5 ORF42285 - 0.078 13.4 0.3 0.24 11.8 0.3 1.8 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit UvrD-helicase PF00580.21 ORF42285 - 0.11 12.0 0.4 0.23 11.0 0.0 1.7 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain ResIII PF04851.15 ORF42285 - 0.18 11.8 0.0 0.34 10.9 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_16 PF13191.6 ORF42285 - 4.8 7.5 6.0 1.6 9.1 0.1 3.0 2 1 1 3 3 3 0 AAA ATPase domain Oxysterol_BP PF01237.18 ORF77795 - 0.2 10.4 4.6 0.37 9.6 4.6 1.3 1 0 0 1 1 1 0 Oxysterol-binding protein Rieske_2 PF13806.6 ORF137612 - 4.1e-20 71.7 0.0 8.8e-20 70.6 0.0 1.6 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Pyr_redox_2 PF07992.14 ORF137612 - 1e-18 67.6 0.0 1.9e-18 66.8 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR PF01077.22 ORF137612 - 3.9e-16 59.0 0.0 6.7e-16 58.2 0.0 1.4 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Fer2_BFD PF04324.15 ORF137612 - 2.9e-10 40.3 11.5 5.6e-09 36.2 10.6 2.8 2 0 0 2 2 2 1 BFD-like [2Fe-2S] binding domain NIR_SIR_ferr PF03460.17 ORF137612 - 2.5e-07 30.4 0.0 6.7e-07 29.1 0.0 1.8 2 0 0 2 2 2 1 Nitrite/Sulfite reductase ferredoxin-like half domain Rubredoxin_C PF18267.1 ORF137612 - 3.7e-06 26.7 0.0 1.7e-05 24.6 0.0 2.2 1 1 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain Pyr_redox PF00070.27 ORF137612 - 6.5e-06 26.6 0.0 1.7e-05 25.3 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rieske PF00355.26 ORF137612 - 0.021 14.8 0.0 0.049 13.6 0.0 1.7 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain FKBP26_C PF18046.1 ORF137612 - 0.032 14.3 0.0 0.073 13.2 0.0 1.5 1 0 0 1 1 1 0 FKBP26_C-terminal Rieske_2 PF13806.6 ORF12094 - 4.1e-20 71.7 0.0 8.8e-20 70.6 0.0 1.6 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Pyr_redox_2 PF07992.14 ORF12094 - 1e-18 67.6 0.0 1.9e-18 66.8 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NIR_SIR PF01077.22 ORF12094 - 3.9e-16 59.0 0.0 6.7e-16 58.2 0.0 1.4 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain Fer2_BFD PF04324.15 ORF12094 - 2.9e-10 40.3 11.5 5.6e-09 36.2 10.6 2.8 2 0 0 2 2 2 1 BFD-like [2Fe-2S] binding domain NIR_SIR_ferr PF03460.17 ORF12094 - 2.5e-07 30.4 0.0 6.7e-07 29.1 0.0 1.8 2 0 0 2 2 2 1 Nitrite/Sulfite reductase ferredoxin-like half domain Rubredoxin_C PF18267.1 ORF12094 - 3.7e-06 26.7 0.0 1.7e-05 24.6 0.0 2.2 1 1 0 1 1 1 1 Rubredoxin NAD+ reductase C-terminal domain Pyr_redox PF00070.27 ORF12094 - 6.5e-06 26.6 0.0 1.7e-05 25.3 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Rieske PF00355.26 ORF12094 - 0.021 14.8 0.0 0.049 13.6 0.0 1.7 1 0 0 1 1 1 0 Rieske [2Fe-2S] domain FKBP26_C PF18046.1 ORF12094 - 0.032 14.3 0.0 0.073 13.2 0.0 1.5 1 0 0 1 1 1 0 FKBP26_C-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks4.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks4.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks4.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks4.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:06 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- ETF_alpha PF00766.19 ORF38702 - 1.2e-33 115.0 0.3 2.7e-33 113.8 0.3 1.6 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 ORF38702 - 1.3e-32 113.1 0.1 1.8e-32 112.7 0.1 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein domain Epimerase PF01370.21 ORF35264 - 6.2e-27 94.6 0.0 9.3e-27 94.0 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF35264 - 2.9e-20 72.4 0.5 4.6e-20 71.8 0.5 1.4 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 ORF35264 - 2.4e-16 60.2 0.0 3.1e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF35264 - 2.9e-15 56.5 0.0 5e-15 55.7 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF35264 - 6.8e-13 48.4 0.3 4.8e-12 45.6 0.3 2.0 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF35264 - 6.3e-10 38.7 0.3 9.4e-10 38.1 0.3 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NmrA PF05368.13 ORF35264 - 1.6e-08 34.5 0.1 2.9e-08 33.5 0.1 1.4 1 0 0 1 1 1 1 NmrA-like family KR PF08659.10 ORF35264 - 2.1e-08 34.3 0.1 3.5e-08 33.6 0.1 1.3 1 0 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 ORF35264 - 3.5e-05 23.0 0.1 5.7e-05 22.4 0.1 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain DapB_N PF01113.20 ORF35264 - 0.0029 17.7 0.5 0.0097 16.0 0.5 1.9 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 ORF35264 - 0.0039 17.4 0.1 0.15 12.4 0.1 2.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain adh_short PF00106.25 ORF35264 - 0.0048 16.4 0.2 0.0089 15.5 0.2 1.5 1 1 0 1 1 1 1 short chain dehydrogenase Semialdhyde_dh PF01118.24 ORF35264 - 0.072 13.5 0.0 0.27 11.7 0.0 2.0 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain Meckelin PF09773.9 ORF32010 - 1.6e-50 172.1 1.0 1.8e-50 171.9 1.0 1.0 1 0 0 1 1 1 1 Meckelin (Transmembrane protein 67) PGM_PMM_III PF02880.16 ORF26531 - 2.2e-28 98.7 0.0 4.5e-28 97.7 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 ORF26531 - 4.8e-08 33.6 0.1 7.5e-07 29.7 0.1 2.6 2 1 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 ORF26531 - 4.6e-07 29.9 0.0 1e-06 28.8 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain TOC159_MAD PF11886.8 ORF23675 - 0.0053 15.7 0.4 0.011 14.6 0.3 1.6 1 1 0 1 1 1 1 Translocase of chloroplast 159/132, membrane anchor domain DUF148 PF02520.17 ORF23675 - 6.5 6.9 11.6 0.17 12.0 0.5 2.5 2 1 0 2 2 2 0 Domain of unknown function DUF148 GTP1_OBG PF01018.22 ORF20111 - 7.4e-26 90.6 2.3 1.1e-25 90.0 2.3 1.2 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 ORF20111 - 4.4e-21 75.1 0.0 6.4e-21 74.6 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF20111 - 2.7e-08 33.5 0.0 4.4e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B ATP_bind_1 PF03029.17 ORF20111 - 0.00075 19.3 0.0 0.98 9.1 0.0 2.2 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 ORF20111 - 0.0017 18.4 0.0 0.42 10.6 0.0 2.2 1 1 1 2 2 2 2 Dynamin family Arf PF00025.21 ORF20111 - 0.0025 17.3 0.0 0.01 15.3 0.0 1.8 1 1 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF20111 - 0.13 11.8 0.0 2.9 7.4 0.0 2.1 1 1 0 2 2 2 0 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF20111 - 0.24 10.8 0.0 0.36 10.2 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit START PF01852.19 ORF19091 - 1.4e-10 41.0 0.0 2.7e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 START domain VASP_tetra PF08776.11 ORF19091 - 0.01 15.4 0.7 0.037 13.6 0.2 2.2 2 0 0 2 2 2 0 VASP tetramerisation domain Complex1_49kDa PF00346.19 ORF147880 - 5.9e-70 235.5 0.1 7.3e-70 235.1 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABC_tran PF00005.27 ORF13643 - 6.6e-30 104.4 0.0 1.1e-29 103.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF13643 - 1.3e-07 31.3 0.5 8.1e-05 22.2 0.3 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF13643 - 0.015 15.0 0.0 0.038 13.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 ORF13643 - 0.017 15.2 0.1 0.066 13.3 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_16 PF13191.6 ORF13643 - 0.036 14.4 0.1 0.078 13.4 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 ORF13643 - 0.036 14.6 0.0 0.078 13.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF13643 - 0.041 13.6 0.0 0.15 11.8 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_21 PF13304.6 ORF13643 - 0.042 13.7 0.1 2 8.1 0.0 2.2 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 ORF13643 - 0.054 13.9 0.3 0.89 10.0 0.3 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 ORF13643 - 0.095 11.9 1.2 0.42 9.8 1.2 2.0 1 1 0 1 1 1 0 NB-ARC domain MeaB PF03308.16 ORF13643 - 0.11 11.4 0.0 0.17 10.8 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Lzipper-MIP1 PF14389.6 ORF13643 - 0.11 12.8 0.1 0.23 11.8 0.1 1.4 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 AAA_22 PF13401.6 ORF13643 - 0.13 12.6 0.1 0.38 11.0 0.1 1.8 1 1 0 1 1 1 0 AAA domain Sulfatase PF00884.23 ORF133541 - 1.1e-21 77.5 0.0 1.6e-21 77.0 0.0 1.2 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 ORF133541 - 6.2e-08 33.4 0.1 4.1e-06 27.6 0.1 2.5 1 1 0 1 1 1 1 C-terminal region of aryl-sulfatase DUF1501 PF07394.12 ORF133541 - 0.00056 19.1 0.0 0.00072 18.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1501) Epimerase PF01370.21 ORF131928 - 8.4e-22 77.8 0.0 1.2e-21 77.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF131928 - 1.9e-21 76.3 0.1 2.6e-21 75.8 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF131928 - 1.3e-13 51.1 0.1 1.5e-12 47.5 0.0 2.0 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF131928 - 1.8e-13 50.2 0.1 3.1e-12 46.2 0.1 2.1 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF131928 - 3.9e-13 49.7 0.0 5.5e-13 49.2 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF131928 - 3.6e-06 26.3 0.0 6.6e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NmrA PF05368.13 ORF131928 - 4.6e-05 23.1 0.1 0.00031 20.4 0.0 2.3 3 0 0 3 3 3 1 NmrA-like family KR PF08659.10 ORF131928 - 9.1e-05 22.4 0.0 0.00025 21.0 0.0 1.6 1 1 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 ORF131928 - 0.0065 15.6 0.1 0.047 12.8 0.0 2.0 2 0 0 2 2 2 1 RmlD substrate binding domain adh_short PF00106.25 ORF131928 - 0.095 12.1 0.0 0.61 9.5 0.0 2.3 2 1 0 2 2 2 0 short chain dehydrogenase HEAT_2 PF13646.6 ORF131744 - 1.2e-13 51.3 11.4 4.6e-07 30.1 0.3 3.9 1 1 2 3 3 3 3 HEAT repeats HEAT PF02985.22 ORF131744 - 3.2e-10 39.4 5.5 0.19 12.1 0.0 5.1 5 0 0 5 5 5 4 HEAT repeat HEAT_EZ PF13513.6 ORF131744 - 0.00015 22.1 10.1 0.31 11.6 0.1 4.7 3 2 1 4 4 4 2 HEAT-like repeat Cnd1 PF12717.7 ORF131744 - 0.0074 16.3 0.3 10 6.2 0.0 3.4 1 1 1 2 2 2 2 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 ORF131744 - 0.023 14.7 2.1 0.32 11.1 0.0 3.2 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.20 ORF131744 - 0.12 11.0 0.1 1 7.8 0.0 1.9 1 1 1 2 2 2 0 Adaptin N terminal region HEAT_PBS PF03130.16 ORF131744 - 3 8.8 15.5 7.9 7.5 0.3 4.4 4 0 0 4 4 4 0 PBS lyase HEAT-like repeat BPD_transp_1 PF00528.22 ORF131492 - 2.8e-28 98.9 11.7 5.2e-28 98.0 11.7 1.4 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 ORF131492 - 3.1e-06 27.1 0.1 3.1e-06 27.1 0.1 3.5 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C Complex1_49kDa PF00346.19 ORF131143 - 5.9e-70 235.5 0.1 7.3e-70 235.1 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UBA_4 PF14555.6 ORF130334 - 2.1e-06 27.5 0.2 3.9e-06 26.6 0.2 1.4 1 0 0 1 1 1 1 UBA-like domain Thioredoxin_7 PF13899.6 ORF130334 - 0.083 13.1 0.1 0.21 11.8 0.1 1.7 1 0 0 1 1 1 0 Thioredoxin-like Abhydrolase_1 PF00561.20 ORF128216 - 0.00028 20.6 0.0 0.00049 19.8 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Arb2 PF09757.9 ORF128216 - 0.00062 19.0 0.0 0.00086 18.5 0.0 1.2 1 0 0 1 1 1 1 Arb2 domain SusD-like_2 PF12771.7 ORF128216 - 0.0059 15.6 0.1 0.0088 15.0 0.1 1.3 1 0 0 1 1 1 1 Starch-binding associating with outer membrane DUF2974 PF11187.8 ORF128216 - 0.032 13.8 0.1 0.05 13.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) PGAP1 PF07819.13 ORF128216 - 0.051 13.3 0.0 0.074 12.8 0.0 1.3 1 0 0 1 1 1 0 PGAP1-like protein TraC_F_IV PF11130.8 ORF128216 - 0.074 12.7 0.1 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 F pilus assembly Type-IV secretion system for plasmid transfer DUF2877 PF11392.8 ORF126788 - 1.8e-28 99.4 0.1 2.9e-28 98.8 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2877) Comm PF15957.5 ORF12305 - 0.35 11.2 7.8 0.086 13.2 4.4 1.7 1 1 1 2 2 2 0 Commissureless RPN7 PF10602.9 ORF121356 - 1.1e-57 194.6 0.7 1.9e-57 193.8 0.7 1.4 1 0 0 1 1 1 1 26S proteasome subunit RPN7 PCI PF01399.27 ORF121356 - 1.2e-13 51.5 0.1 2.3e-13 50.6 0.1 1.5 1 0 0 1 1 1 1 PCI domain DUF87 PF01935.17 ORF117750 - 0.0062 16.7 2.0 0.0062 16.7 2.0 2.1 2 0 0 2 2 2 1 Helicase HerA, central domain Consortin_C PF15281.6 ORF117680 - 9.6 6.2 7.3 1.4 9.0 1.2 2.7 2 0 0 2 2 2 0 Consortin C-terminus Ank_2 PF12796.7 ORF11380 - 1.9e-09 37.9 0.1 4.4e-09 36.8 0.1 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF11380 - 4.7e-09 36.3 0.5 0.00014 22.0 0.0 2.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF11380 - 7.6e-09 35.6 0.1 0.00029 21.1 0.1 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF11380 - 3.9e-07 30.5 0.2 1.9e-06 28.3 0.1 2.2 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF11380 - 2.1e-06 27.6 0.2 0.085 13.5 0.1 2.8 2 0 0 2 2 2 2 Ankyrin repeat PBP1_TM PF14812.6 ORF113526 - 0.033 14.6 2.4 0.057 13.8 2.4 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal MORN PF02493.20 ORF113526 - 0.14 12.1 2.9 0.29 11.1 0.2 2.6 2 0 0 2 2 2 0 MORN repeat FAM176 PF14851.6 ORF113526 - 0.19 11.4 2.1 0.34 10.6 2.1 1.4 1 0 0 1 1 1 0 FAM176 family Pox_Ag35 PF03286.14 ORF113526 - 1.1 9.0 6.4 1.9 8.2 6.4 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Inhibitor_I71 PF12628.7 ORF113526 - 6.9 6.5 9.9 18 5.1 7.0 2.6 2 1 0 2 2 2 0 Falstatin, cysteine peptidase inhibitor Ank_2 PF12796.7 ORF109899 - 1.8e-09 38.1 0.1 4.4e-09 36.8 0.1 1.7 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF109899 - 4.7e-09 36.3 0.5 0.00014 22.0 0.0 2.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF109899 - 7.7e-09 35.6 0.1 0.00029 21.1 0.1 2.6 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF109899 - 4e-07 30.5 0.2 1.9e-06 28.3 0.1 2.2 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF109899 - 2.1e-06 27.6 0.2 0.085 13.5 0.1 2.8 2 0 0 2 2 2 2 Ankyrin repeat Beta-lactamase PF00144.24 ORF109855 - 8.7e-21 74.5 1.7 5.3e-19 68.6 1.7 2.0 1 1 0 1 1 1 1 Beta-lactamase Complex1_49kDa PF00346.19 ORF108898 - 5.9e-70 235.5 0.1 7.3e-70 235.1 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_49kDa PF00346.19 ORF107082 - 5.9e-70 235.5 0.1 7.3e-70 235.1 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Cys_rich_FGFR PF00839.17 ORF104098 - 4.5e-07 29.9 5.0 0.0017 18.5 0.4 3.0 2 1 1 3 3 3 2 Cysteine rich repeat DUF4366 PF14283.6 ORF104098 - 0.054 13.5 0.2 0.054 13.5 0.2 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4366) GREB1 PF15782.5 ORF104098 - 0.093 9.9 4.0 0.11 9.6 4.0 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer RskA PF10099.9 ORF104098 - 0.19 12.0 2.9 0.15 12.3 0.6 1.8 1 1 1 2 2 2 0 Anti-sigma-K factor rskA ALMT PF11744.8 ORF104098 - 3.3 6.5 6.8 3.7 6.3 6.8 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter AAA_11 PF13086.6 ORF104098 - 4.2 7.1 12.3 6.6 6.4 12.3 1.3 1 0 0 1 1 1 0 AAA domain Caudo_TAP PF02413.17 ORF104098 - 5 7.3 16.2 7.2 6.8 14.6 1.9 1 1 1 2 2 2 0 Caudovirales tail fibre assembly protein, lambda gpK Hid1 PF12722.7 ORF104098 - 6.8 4.7 11.4 8.6 4.3 11.4 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein CarboxypepD_reg PF13620.6 ORF103107 - 0.011 16.0 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain Rotamase PF00639.21 ORF92425 - 3.1e-15 56.9 0.1 1.2e-14 55.0 0.0 2.1 2 0 0 2 2 2 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 ORF92425 - 1.3e-10 41.8 0.0 4.4e-10 40.1 0.0 1.9 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 ORF92425 - 0.015 16.1 0.1 0.056 14.3 0.0 2.1 2 1 0 2 2 2 0 PPIC-type PPIASE domain FapA PF03961.13 ORF9124 - 1.8 7.0 15.9 2.8 6.4 15.9 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A MCM_N PF14551.6 ORF90466 - 5.3 7.7 9.2 1.3 9.7 4.5 2.4 3 1 0 3 3 3 0 MCM N-terminal domain MoCF_biosynth PF00994.24 ORF8619 - 6.4e-05 22.7 0.0 0.0013 18.4 0.0 2.2 2 0 0 2 2 2 1 Probable molybdopterin binding domain CinA_KH PF18146.1 ORF8619 - 0.00028 21.0 0.0 0.00061 19.9 0.0 1.5 1 0 0 1 1 1 1 Damage-inducible protein CinA KH domain CinA PF02464.17 ORF8619 - 0.0021 17.6 0.2 0.3 10.6 0.0 2.4 2 0 0 2 2 2 2 Competence-damaged protein PAH PF02671.21 ORF63968 - 0.06 13.5 0.4 0.34 11.1 0.0 2.4 3 0 0 3 3 3 0 Paired amphipathic helix repeat Methyltransf_7 PF03492.15 ORF59450 - 9.1e-35 120.4 0.0 1.2e-34 120.1 0.0 1.2 1 0 0 1 1 1 1 SAM dependent carboxyl methyltransferase SHOCT PF09851.9 ORF59450 - 3.9 7.3 4.2 1.4 8.7 0.2 2.1 2 0 0 2 2 2 0 Short C-terminal domain Acetyltransf_13 PF13880.6 ORF59234 - 1.3e-12 47.5 0.0 3e-12 46.3 0.0 1.7 1 0 0 1 1 1 1 ESCO1/2 acetyl-transferase DSPc PF00782.20 ORF57914 - 1.2e-24 86.6 0.0 2e-24 85.9 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF57914 - 0.05 13.2 0.0 0.073 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Pkinase_Tyr PF07714.17 ORF50954 - 2.4e-06 27.0 0.0 3.4e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF50954 - 0.01 15.2 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain Pkinase PF00069.25 ORF46124 - 1.7e-43 148.9 0.0 4e-43 147.7 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF46124 - 4.4e-22 78.6 0.0 2.1e-21 76.4 0.0 1.8 1 1 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF46124 - 0.00015 20.7 0.0 0.00022 20.1 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF46124 - 0.00069 18.7 0.0 0.0009 18.3 0.0 1.3 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF46124 - 0.0095 15.9 0.1 0.014 15.3 0.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF46124 - 0.017 14.5 0.1 0.066 12.5 0.1 1.8 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family PAH PF02671.21 ORF4567 - 0.06 13.5 0.4 0.34 11.1 0.0 2.4 3 0 0 3 3 3 0 Paired amphipathic helix repeat zf-Paramyx-P PF13008.7 ORF45548 - 0.2 11.2 2.6 3 7.4 0.1 3.2 3 0 0 3 3 3 0 Zinc-binding domain of Paramyxoviridae V protein zf-Paramyx-P PF13008.7 ORF44341 - 0.2 11.2 2.6 3 7.4 0.1 3.2 3 0 0 3 3 3 0 Zinc-binding domain of Paramyxoviridae V protein zf-RING_2 PF13639.6 ORF43817 - 4.1e-10 39.8 17.0 4.1e-10 39.8 17.0 2.4 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF43817 - 6.4e-05 23.2 15.0 6.4e-05 23.2 15.0 1.9 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF43817 - 0.00017 21.3 13.2 0.00046 19.9 13.2 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF43817 - 0.0024 17.7 12.0 0.0024 17.7 12.0 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF43817 - 0.014 15.5 6.9 0.032 14.3 6.9 1.6 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF43817 - 1.5 9.1 14.6 7.1 6.9 14.6 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain Tim17 PF02466.19 ORF42292 - 0.012 16.0 0.0 0.028 14.8 0.0 1.5 1 1 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family GAS2 PF02187.17 ORF37358 - 0.00058 19.9 0.0 0.0013 18.7 0.0 1.6 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain HOOK PF05622.12 ORF37358 - 0.0029 15.9 8.2 0.0029 15.9 8.2 2.1 1 1 1 2 2 2 1 HOOK protein JIP_LZII PF16471.5 ORF37358 - 0.0041 17.3 5.5 0.0041 17.3 5.5 4.3 1 1 3 4 4 3 1 JNK-interacting protein leucine zipper II CENP-F_leu_zip PF10473.9 ORF37358 - 0.0056 16.7 38.4 1.2 9.1 15.0 3.1 1 1 1 2 2 2 2 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlaC_arch PF05377.11 ORF37358 - 0.023 15.1 1.9 0.023 15.1 1.9 5.1 2 2 2 4 4 4 0 Flagella accessory protein C (FlaC) TMF_TATA_bd PF12325.8 ORF37358 - 0.033 14.4 29.1 0.62 10.3 2.0 4.2 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding SlyX PF04102.12 ORF37358 - 0.053 14.1 1.7 0.053 14.1 1.7 4.0 1 1 2 3 3 2 0 SlyX Spc7 PF08317.11 ORF37358 - 0.056 12.3 35.6 0.71 8.7 22.9 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF3584 PF12128.8 ORF37358 - 0.12 9.8 29.9 0.22 9.0 29.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) GAS PF13851.6 ORF37358 - 0.17 11.2 34.4 0.32 10.3 21.6 2.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF812 PF05667.11 ORF37358 - 0.17 10.7 34.8 1.6 7.5 10.1 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF812) Phage_GP20 PF06810.11 ORF37358 - 0.19 11.5 39.1 2.1 8.1 7.8 3.5 1 1 2 3 3 3 0 Phage minor structural protein GP20 TolA_bind_tri PF16331.5 ORF37358 - 0.2 11.7 24.0 3.9 7.6 0.1 4.0 1 1 2 4 4 4 0 TolA binding protein trimerisation Fez1 PF06818.15 ORF37358 - 0.23 11.9 31.6 0.27 11.7 21.0 2.3 1 1 1 2 2 2 0 Fez1 Tropomyosin_1 PF12718.7 ORF37358 - 0.31 11.2 43.9 0.24 11.5 26.1 2.8 1 1 1 2 2 2 0 Tropomyosin like UPF0242 PF06785.11 ORF37358 - 0.33 11.0 38.6 3.8 7.6 8.2 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus YjbH PF06082.11 ORF37358 - 0.34 9.7 6.2 0.44 9.3 6.2 1.1 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH DUF4407 PF14362.6 ORF37358 - 0.44 9.9 27.3 1.3 8.3 26.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Exonuc_VII_L PF02601.15 ORF37358 - 0.45 10.0 14.9 0.73 9.3 14.9 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4618 PF15397.6 ORF37358 - 0.55 9.6 27.3 2.2 7.6 0.6 3.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) TPR_MLP1_2 PF07926.12 ORF37358 - 0.67 10.0 36.3 1.7 8.7 12.7 3.3 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Filament PF00038.21 ORF37358 - 0.7 9.4 30.0 2.7 7.5 4.7 2.7 1 1 2 3 3 3 0 Intermediate filament protein CLZ PF16526.5 ORF37358 - 1.3 9.4 23.9 0.18 12.2 5.0 3.6 1 1 3 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Golgin_A5 PF09787.9 ORF37358 - 1.9 7.9 34.1 2.6 7.4 5.5 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 PI3K_P85_iSH2 PF16454.5 ORF37358 - 2 8.0 27.4 1.7 8.2 1.9 3.4 1 1 2 3 3 3 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain MCC-bdg_PDZ PF10506.9 ORF37358 - 2.1 8.4 17.0 0.64 10.1 1.1 4.1 4 1 1 5 5 4 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Pox_A_type_inc PF04508.12 ORF37358 - 2.4 8.1 6.1 13 5.8 0.1 3.3 3 0 0 3 3 2 0 Viral A-type inclusion protein repeat Prominin PF05478.11 ORF37358 - 2.4 6.0 13.1 3.7 5.4 13.1 1.3 1 0 0 1 1 1 0 Prominin DUF4200 PF13863.6 ORF37358 - 2.8 8.4 35.0 19 5.7 3.9 3.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4200) HIP1_clath_bdg PF16515.5 ORF37358 - 3.6 8.2 32.8 4.3 8.0 3.6 3.3 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 APG6_N PF17675.1 ORF37358 - 6.7 7.3 42.5 7.2 7.2 17.7 2.5 1 1 1 2 2 2 0 Apg6 coiled-coil region YlqD PF11068.8 ORF37358 - 8.3 6.8 28.8 7.5 6.9 8.4 2.6 1 1 1 2 2 2 0 YlqD protein PTS_2-RNA PF01885.16 ORF3710 - 0.00011 22.4 0.0 0.00015 21.9 0.0 1.2 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Cnn_1N PF07989.11 ORF30949 - 0.011 15.9 3.2 0.011 15.9 3.2 2.9 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 Rootletin PF15035.6 ORF30949 - 0.016 15.3 3.5 0.016 15.3 3.5 2.2 2 0 0 2 2 2 0 Ciliary rootlet component, centrosome cohesion Speriolin_N PF15058.6 ORF30949 - 0.02 15.0 0.4 0.067 13.3 0.1 1.9 2 0 0 2 2 2 0 Speriolin N terminus ZapB PF06005.12 ORF30949 - 0.048 14.1 2.4 0.048 14.1 2.4 3.1 2 1 1 3 3 3 0 Cell division protein ZapB BRE1 PF08647.11 ORF30949 - 0.11 12.5 10.2 2.1 8.5 4.1 2.8 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase Taxilin PF09728.9 ORF30949 - 0.13 11.5 14.4 0.24 10.6 4.2 2.2 2 0 0 2 2 2 0 Myosin-like coiled-coil protein GAS PF13851.6 ORF30949 - 0.2 11.0 16.5 0.32 10.3 5.7 3.0 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding Csm1_N PF18504.1 ORF30949 - 0.26 11.6 8.3 5.7 7.4 3.1 2.9 2 1 0 2 2 2 0 Csm1 N-terminal domain YabA PF06156.13 ORF30949 - 0.69 10.6 8.4 0.27 11.9 1.4 2.9 2 1 1 3 3 3 0 Initiation control protein YabA APG6_N PF17675.1 ORF30949 - 1.3 9.5 14.1 2.5 8.6 5.6 2.5 2 0 0 2 2 2 0 Apg6 coiled-coil region bZIP_2 PF07716.15 ORF30949 - 2.3 8.4 8.6 4 7.6 0.2 3.3 2 1 1 3 3 3 0 Basic region leucine zipper DivIC PF04977.15 ORF30949 - 7.9 6.3 12.3 0.15 11.8 1.6 2.8 3 0 0 3 3 3 0 Septum formation initiator zf-CpG_bind_C PF12269.8 ORF21918 - 0.21 11.3 5.4 0.041 13.7 1.3 1.8 2 0 0 2 2 2 0 CpG binding protein zinc finger C terminal domain TssO PF17561.2 ORF21918 - 0.75 9.9 6.7 0.14 12.2 2.5 2.0 2 0 0 2 2 2 0 Type VI secretion system, TssO RhoGEF PF00621.20 ORF19659 - 0.00084 19.6 2.6 0.00084 19.6 2.6 1.9 2 0 0 2 2 2 1 RhoGEF domain GDPD PF03009.17 ORF19659 - 1.2 8.8 8.6 0.24 11.1 2.3 2.1 1 1 0 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family S-AdoMet_synt_C PF02773.16 ORF19578 - 3.7e-62 208.4 0.1 7.9e-62 207.3 0.0 1.6 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 ORF19578 - 1.5e-39 134.9 0.1 4.1e-39 133.5 0.0 1.7 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 ORF19578 - 3.2e-07 30.9 0.1 7.4e-07 29.8 0.1 1.6 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain DUF3654 PF12376.8 ORF19578 - 0.045 13.9 0.4 0.16 12.1 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3654) MFS_1 PF07690.16 ORF152110 - 2.3e-08 33.3 5.9 2.3e-08 33.3 5.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF2070 PF09843.9 ORF152110 - 0.043 12.1 3.9 0.053 11.8 3.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Tombus_P19 PF03220.13 ORF152110 - 0.17 11.5 0.0 0.3 10.8 0.0 1.3 1 0 0 1 1 1 0 Tombusvirus P19 core protein Ank_2 PF12796.7 ORF145274 - 1.3e-53 179.6 0.4 3.6e-12 46.7 0.2 5.1 2 1 3 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF145274 - 1.9e-51 171.8 7.1 1.3e-08 35.2 0.0 7.7 2 2 7 9 9 9 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF145274 - 7.3e-39 127.3 1.4 0.00098 19.4 0.0 9.2 9 0 0 9 9 9 9 Ankyrin repeat Ank_5 PF13857.6 ORF145274 - 1.3e-37 127.4 5.9 6.9e-06 26.2 0.0 7.6 3 1 5 8 8 8 8 Ankyrin repeats (many copies) Ank PF00023.30 ORF145274 - 1.9e-37 126.1 11.4 6.7e-05 23.2 0.0 9.1 9 0 0 9 9 9 9 Ankyrin repeat DUF3107 PF11305.8 ORF145274 - 0.12 12.7 0.0 1.3 9.4 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3107) CLASP_N PF12348.8 ORF145274 - 0.14 11.7 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 CLASP N terminal MycE_N PF17843.1 ORF145274 - 4.2 7.9 6.2 24 5.4 0.1 3.9 3 2 1 5 5 5 0 MycE methyltransferase N-terminal zf-CpG_bind_C PF12269.8 ORF141876 - 0.21 11.3 5.4 0.041 13.7 1.3 1.8 2 0 0 2 2 2 0 CpG binding protein zinc finger C terminal domain TssO PF17561.2 ORF141876 - 0.75 9.9 6.7 0.14 12.2 2.5 2.0 2 0 0 2 2 2 0 Type VI secretion system, TssO HGD-D PF06050.13 ORF141773 - 1.9e-72 244.8 1.1 2.1e-71 241.3 1.1 1.9 1 1 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component CK_II_beta PF01214.18 ORF136338 - 0.46 10.3 2.6 0.8 9.5 2.6 1.3 1 0 0 1 1 1 0 Casein kinase II regulatory subunit FapA PF03961.13 ORF132120 - 2.3 6.7 16.2 3.4 6.2 16.2 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A Methyltransf_7 PF03492.15 ORF128619 - 9.1e-35 120.4 0.0 1.2e-34 120.1 0.0 1.2 1 0 0 1 1 1 1 SAM dependent carboxyl methyltransferase SHOCT PF09851.9 ORF128619 - 3.9 7.3 4.2 1.4 8.7 0.2 2.1 2 0 0 2 2 2 0 Short C-terminal domain FapA PF03961.13 ORF123661 - 1.9 7.0 15.9 2.8 6.4 15.9 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A ADH_zinc_N PF00107.26 ORF121676 - 2.3e-26 92.3 0.0 3.9e-26 91.6 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF121676 - 2.6e-17 64.1 0.0 5.2e-17 63.1 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF3858 PF12970.7 ORF121676 - 0.023 14.7 0.0 0.1 12.6 0.0 1.9 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3858) DUF1959 PF09218.10 ORF121676 - 0.076 13.1 0.1 0.14 12.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1959) Cupin_8 PF13621.6 ORF113931 - 4e-06 26.8 0.1 9.2e-05 22.3 0.0 2.1 1 1 1 2 2 2 2 Cupin-like domain Podoplanin PF05808.11 ORF113452 - 0.0057 16.8 0.1 0.011 15.8 0.1 1.4 1 0 0 1 1 1 1 Podoplanin SPX PF03105.19 ORF113452 - 0.051 13.5 2.8 0.059 13.3 2.8 1.2 1 0 0 1 1 1 0 SPX domain Rhomboid PF01694.22 ORF109125 - 1.5e-32 112.7 14.7 1.5e-32 112.7 14.7 2.2 2 1 1 3 3 3 1 Rhomboid family DUF1398 PF07166.11 ORF109125 - 0.093 12.8 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1398) DUF5368 PF17336.2 ORF109125 - 5.5 7.2 12.6 14 5.9 9.3 2.8 2 1 1 3 3 3 0 Family of unknown function (DUF5368) DUF3671 PF12420.8 ORF109125 - 9.5 6.3 9.8 2.1e+02 2.0 0.0 3.1 2 1 0 2 2 2 0 Protein of unknown function Response_reg PF00072.24 ORF106566 - 4.7e-31 107.3 0.8 7.2e-30 103.4 0.5 2.2 2 0 0 2 2 2 1 Response regulator receiver domain Hpt PF01627.23 ORF106566 - 3.2e-13 49.8 0.1 3.2e-13 49.8 0.1 2.5 3 0 0 3 3 3 1 Hpt domain Helicase_C PF00271.31 ORF104012 - 5.7e-27 94.3 0.0 1.4e-26 93.0 0.0 1.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF104012 - 8.8e-17 61.4 0.0 1.7e-16 60.5 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase CMS1 PF14617.6 ORF104012 - 0.0019 17.6 1.3 0.029 13.7 0.0 2.6 3 0 0 3 3 3 1 U3-containing 90S pre-ribosomal complex subunit Baculo_p47 PF05112.12 ORF104012 - 0.049 13.2 0.0 0.067 12.8 0.0 1.2 1 0 0 1 1 1 0 Baculovirus P47 protein Rhodanese PF00581.20 ORF104012 - 0.079 13.5 0.0 0.16 12.5 0.0 1.5 1 0 0 1 1 1 0 Rhodanese-like domain PHR PF08005.12 NODE_18891_length_1016_cov_10.044852_g14429_i0forward_frame_1 - 2.8e-08 34.6 0.3 2.8e-08 34.6 0.3 2.1 3 1 0 3 3 3 1 PHR domain Pkinase PF00069.25 NODE_18774_length_1019_cov_165.674797_g14333_i0reverse_frame_3 - 6e-53 179.9 0.1 7.2e-53 179.6 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_18774_length_1019_cov_165.674797_g14333_i0reverse_frame_3 - 1.4e-28 99.9 0.0 1.7e-28 99.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_18774_length_1019_cov_165.674797_g14333_i0reverse_frame_3 - 0.00029 19.9 0.2 0.00037 19.6 0.2 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 NODE_18774_length_1019_cov_165.674797_g14333_i0reverse_frame_3 - 0.0051 15.6 0.1 0.0063 15.3 0.1 1.3 1 0 0 1 1 1 1 Fungal protein kinase CMV_1a_C PF12503.8 NODE_18774_length_1019_cov_165.674797_g14333_i0forward_frame_3 - 0.049 13.6 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 Cucumber mosaic virus 1a protein C terminal Lipase_3 PF01764.25 ORF9972 - 3.7e-27 94.9 0.0 5.1e-27 94.5 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 ORF9972 - 0.0019 17.8 0.1 0.026 14.1 0.1 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_6 PF12697.7 ORF9972 - 0.025 15.2 0.3 0.049 14.2 0.1 1.6 1 1 0 2 2 2 0 Alpha/beta hydrolase family HATPase_c PF02518.26 ORF99683 - 1.3e-22 80.4 0.1 2.7e-22 79.4 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF99683 - 6.8e-10 38.8 0.1 2e-09 37.4 0.1 1.9 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF99683 - 0.0049 16.7 0.2 0.01 15.6 0.2 1.6 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MFS_1 PF07690.16 ORF98168 - 2.4e-11 43.2 19.4 1.7e-08 33.8 3.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 ORF98168 - 0.0012 18.2 3.7 0.0012 18.2 3.7 2.1 2 1 1 3 3 3 1 Uncharacterised MFS-type transporter YbfB Tcp11 PF05794.13 ORF9335 - 0.017 14.2 0.7 0.03 13.4 0.7 1.3 1 1 0 1 1 1 0 T-complex protein 11 DUF501 PF04417.12 ORF9335 - 0.067 13.0 1.6 0.1 12.4 0.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF501) Pkinase PF00069.25 ORF87975 - 1.6e-75 253.9 0.0 1.9e-75 253.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF87975 - 5e-38 130.9 0.0 6.4e-38 130.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF87975 - 0.0016 17.3 0.0 0.0029 16.5 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF87975 - 0.0083 15.1 0.2 0.012 14.6 0.2 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF87975 - 0.01 15.2 0.0 0.018 14.4 0.0 1.4 1 0 0 1 1 1 0 Kinase-like Pkinase_C PF00433.24 ORF87975 - 0.014 16.0 2.2 0.014 16.0 2.2 2.4 2 0 0 2 2 2 0 Protein kinase C terminal domain FTA2 PF13095.6 ORF87975 - 0.028 14.0 0.3 7.3 6.2 0.1 2.2 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Anoct_dimer PF16178.5 ORF87975 - 0.054 13.2 0.4 0.084 12.6 0.4 1.2 1 0 0 1 1 1 0 Dimerisation domain of Ca+-activated chloride-channel, anoctamin Kdo PF06293.14 ORF87975 - 0.062 12.6 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF87975 - 0.08 12.0 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 DnaJ_C PF01556.18 ORF8748 - 1.1e-26 93.7 6.9 1.1e-24 87.2 6.9 2.4 1 1 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 ORF8748 - 7.4e-16 58.0 0.3 1.7e-15 56.9 0.3 1.7 1 0 0 1 1 1 1 DnaJ domain zf-RING_2 PF13639.6 ORF83772 - 3.8e-09 36.7 10.4 6.9e-09 35.9 10.4 1.5 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF83772 - 1.5e-05 25.1 10.2 8.4e-05 22.8 10.2 2.2 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF83772 - 0.0002 21.2 8.4 0.00037 20.4 8.4 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF83772 - 0.0039 17.0 6.7 0.0072 16.2 6.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF83772 - 0.019 14.8 10.1 0.045 13.6 10.1 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF83772 - 0.024 14.5 10.0 0.064 13.1 10.0 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF83772 - 0.044 13.4 5.6 0.12 12.0 5.6 1.7 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF83772 - 0.048 13.8 7.7 0.27 11.4 7.7 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 ORF83772 - 0.16 12.1 9.4 0.39 10.9 9.4 1.6 1 0 0 1 1 1 0 RING-variant domain zf-P11 PF03854.14 ORF83772 - 0.19 11.4 6.7 0.15 11.8 3.3 2.2 2 0 0 2 2 2 0 P-11 zinc finger Prok-RING_4 PF14447.6 ORF83772 - 0.19 11.6 10.2 2.6 8.0 10.5 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF83772 - 0.31 11.1 7.7 0.83 9.8 6.3 2.4 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF83772 - 1.9 8.5 8.9 13 5.9 9.2 2.2 1 1 1 2 2 2 0 RING-type zinc-finger zf-RING_11 PF17123.5 ORF83772 - 6.4 6.6 14.9 0.23 11.2 8.6 1.9 2 0 0 2 2 2 0 RING-like zinc finger GST_C_2 PF13410.6 ORF81055 - 0.0022 18.0 0.0 0.0056 16.7 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF81055 - 0.0023 18.5 0.0 0.0042 17.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain PGK PF00162.19 ORF79782 - 5.1e-114 381.1 1.3 5.7e-114 381.0 1.3 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF79782 - 0.11 12.1 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) BBL5 PF07289.11 ORF76915 - 3.1e-136 453.8 0.9 3.5e-136 453.6 0.9 1.0 1 0 0 1 1 1 1 Bardet-Biedl syndrome 5 protein Vps36_ESCRT-II PF11605.8 ORF76915 - 0.00034 20.7 0.1 0.0098 16.1 0.1 2.4 2 0 0 2 2 2 1 Vacuolar protein sorting protein 36 Vps36 bPH_3 PF14470.6 ORF76915 - 0.00045 20.5 0.1 0.24 11.8 0.0 2.4 2 0 0 2 2 2 2 Bacterial PH domain Voldacs PF03517.13 ORF76915 - 0.014 15.5 0.1 1.2 9.3 0.0 2.6 2 0 0 2 2 2 0 Regulator of volume decrease after cellular swelling PH_TFIIH PF08567.11 ORF76915 - 0.14 12.5 0.0 1.3 9.3 0.0 2.3 2 0 0 2 2 2 0 TFIIH p62 subunit, N-terminal domain Peripla_BP_3 PF13377.6 ORF74891 - 3.6e-34 118.5 0.0 8.7e-34 117.2 0.0 1.7 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF74891 - 1.2e-25 90.6 0.1 1.4e-25 90.2 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 ORF74891 - 1e-21 76.4 0.2 1.9e-21 75.6 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 ORF74891 - 2.1e-18 66.8 0.0 3.7e-18 66.0 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_38 PF13936.6 ORF74891 - 0.00051 19.8 0.3 0.29 10.9 0.0 2.9 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_3 PF01381.22 ORF74891 - 0.00095 19.2 0.0 0.002 18.2 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 ORF74891 - 0.0011 19.2 0.0 0.0029 17.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain TetR_N PF00440.23 ORF74891 - 0.0021 17.8 0.1 0.0087 15.8 0.1 2.1 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_ISL3 PF13542.6 ORF74891 - 0.055 12.9 0.3 0.44 10.0 0.1 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_IclR PF09339.10 ORF74891 - 0.082 12.7 0.0 0.22 11.4 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_7 PF02796.15 ORF74891 - 0.096 12.8 0.1 0.78 9.9 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain of resolvase Acetyltransf_6 PF13480.7 ORF73582 - 0.08 13.1 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain EamA PF00892.20 ORF73023 - 2.1e-22 79.8 27.2 3.3e-17 63.0 7.8 2.1 2 0 0 2 2 2 2 EamA-like transporter family SLATT_5 PF18160.1 ORF73023 - 2.8 7.2 9.4 0.33 10.2 1.9 2.5 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 DUF2207 PF09972.9 ORF72580 - 0.21 10.3 1.6 6.1 5.5 0.1 2.3 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) RRP7 PF12923.7 ORF68997 - 0.29 11.3 8.9 16 5.6 0.6 3.4 3 0 0 3 3 3 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain Med8 PF10232.9 ORF68997 - 0.57 9.7 5.5 0.14 11.7 1.1 1.9 2 0 0 2 2 2 0 Mediator of RNA polymerase II transcription complex subunit 8 PHM7_cyt PF14703.6 ORF68997 - 1.3 9.2 9.9 0.91 9.7 1.7 2.5 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Rrn6 PF10214.9 ORF68997 - 6.3 5.2 9.6 8.1 4.8 9.6 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DDE_Tnp_1_7 PF13843.6 ORF67194 - 0.029 13.7 0.1 0.046 13.0 0.1 1.2 1 0 0 1 1 1 0 Transposase IS4 Apolipoprotein PF01442.18 ORF67194 - 0.03 14.2 14.4 0.091 12.6 13.7 2.1 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain DUF3584 PF12128.8 ORF67194 - 0.11 10.0 11.0 0.11 10.0 10.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) Baculo_PEP_C PF04513.12 ORF67194 - 0.18 11.8 0.4 21 5.2 0.3 2.9 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus HTH_37 PF13744.6 ORF67194 - 0.37 10.8 4.8 0.6 10.1 1.5 2.9 2 1 1 3 3 3 0 Helix-turn-helix domain Exonuc_VII_L PF02601.15 ORF67194 - 0.61 9.6 7.5 1 8.8 7.5 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit Fzo_mitofusin PF04799.13 ORF67194 - 0.63 9.6 4.2 1.2 8.7 2.4 2.3 1 1 1 2 2 2 0 fzo-like conserved region FUSC PF04632.12 ORF67194 - 1.7 7.1 12.1 2.4 6.6 12.1 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family zf-BED PF02892.15 ORF63836 - 0.12 12.4 0.8 0.37 10.9 0.8 1.8 1 0 0 1 1 1 0 BED zinc finger DUF2653 PF10850.8 ORF63282 - 0.01 16.0 2.6 11 6.3 0.0 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF2653) adh_short PF00106.25 ORF5295 - 2.5e-31 108.7 0.0 3.2e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF5295 - 1.7e-14 53.9 0.0 2.2e-14 53.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF5295 - 4e-05 23.6 0.0 9.3e-05 22.4 0.0 1.6 1 1 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF5295 - 0.033 14.1 0.0 0.053 13.4 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RtcR PF06956.11 ORF5295 - 0.16 11.4 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase zf-RING_2 PF13639.6 ORF49792 - 2.5e-11 43.7 5.4 4.2e-11 43.0 5.4 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF49792 - 6.9e-10 38.6 6.0 1.2e-09 37.8 6.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF49792 - 3.2e-08 33.2 1.7 7.6e-08 32.0 1.7 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF49792 - 1.6e-07 31.1 6.0 2.8e-07 30.3 6.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF49792 - 5e-07 29.6 4.8 8.5e-07 28.8 4.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 ORF49792 - 3.6e-06 27.2 5.8 9.8e-06 25.8 5.8 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF49792 - 4.8e-06 26.5 4.5 9.7e-06 25.5 4.5 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF49792 - 0.00017 21.4 6.7 0.00032 20.5 6.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF49792 - 0.00032 20.5 8.3 0.024 14.5 8.9 2.3 1 1 1 2 2 2 2 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF49792 - 0.24 11.1 4.6 0.47 10.1 4.6 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Rad50_zn_hook PF04423.14 ORF49792 - 0.44 10.4 8.1 0.63 9.9 0.7 3.2 3 0 0 3 3 3 0 Rad50 zinc hook motif zf-RING-like PF08746.11 ORF49792 - 0.55 10.6 5.8 1.1 9.6 5.8 1.6 1 1 0 1 1 1 0 RING-like domain zf-P11 PF03854.14 ORF49792 - 1.3 8.7 7.0 6.4 6.5 6.3 2.3 2 1 0 2 2 2 0 P-11 zinc finger UIM PF02809.20 ORF49792 - 7.9 6.7 11.6 0.52 10.4 4.5 2.6 2 0 0 2 2 2 0 Ubiquitin interaction motif Methyltransf_31 PF13847.6 ORF48873 - 1.2e-12 47.9 0.0 1.6e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF48873 - 6.3e-10 39.6 0.0 1.3e-09 38.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF48873 - 3.6e-08 34.0 0.0 7.9e-08 33.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF48873 - 4.7e-08 33.6 0.0 1.2e-07 32.3 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF48873 - 4.3e-07 29.5 0.0 1.4e-06 27.8 0.0 1.8 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF48873 - 3.3e-05 23.8 0.0 5.1e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain ADH_zinc_N PF00107.26 ORF48873 - 0.017 15.1 0.0 0.05 13.6 0.0 1.8 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DUF43 PF01861.16 ORF48873 - 0.075 12.2 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain HATPase_c PF02518.26 ORF45885 - 1.3e-22 80.4 0.1 2.7e-22 79.4 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF45885 - 6.8e-10 38.8 0.1 2e-09 37.4 0.1 1.9 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF45885 - 0.0049 16.7 0.2 0.01 15.6 0.2 1.6 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KdgT PF03812.13 ORF44710 - 2.1e-112 375.4 29.9 2.4e-112 375.2 29.9 1.0 1 0 0 1 1 1 1 2-keto-3-deoxygluconate permease Hydrolase PF00702.26 ORF39969 - 2.7e-05 24.6 0.0 3.9e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.21 ORF39969 - 0.076 12.7 7.6 0.056 13.2 6.5 1.4 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF4203 PF13886.6 ORF39969 - 0.21 11.2 14.6 0.82 9.3 0.4 2.6 1 1 1 3 3 3 0 Domain of unknown function (DUF4203) zf-BED PF02892.15 ORF39567 - 0.12 12.4 0.8 0.37 10.9 0.8 1.8 1 0 0 1 1 1 0 BED zinc finger AMP-binding PF00501.28 ORF37649 - 1e-10 40.9 0.0 1.5e-10 40.3 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme Aminotran_4 PF01063.19 ORF36988 - 1.1e-20 74.4 0.0 1.3e-20 74.2 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV UPF0182 PF03699.13 ORF35775 - 0.11 10.5 0.8 0.12 10.4 0.8 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) KdpC PF02669.15 ORF35775 - 0.2 11.5 0.1 0.34 10.7 0.1 1.3 1 0 0 1 1 1 0 K+-transporting ATPase, c chain TatC PF00902.18 ORF35775 - 0.52 10.1 9.8 1.1 9.0 9.8 1.5 1 1 0 1 1 1 0 Sec-independent protein translocase protein (TatC) OpuAC PF04069.12 ORF30407 - 4.7e-27 95.2 2.2 7e-27 94.6 2.2 1.2 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system NMT1_2 PF13379.6 ORF30407 - 5e-21 75.5 3.1 1e-20 74.5 3.1 1.5 1 1 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 ORF30407 - 4e-18 66.2 0.0 5.8e-18 65.6 0.0 1.2 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 ORF30407 - 1.2e-07 31.5 0.2 1.9e-07 30.9 0.2 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein Ribosomal_L1 PF00687.21 ORF28555 - 1.4e-37 129.4 2.2 2.1e-37 128.8 1.0 1.8 1 1 1 2 2 2 1 Ribosomal protein L1p/L10e family Complex1_LYR_2 PF13233.6 ORF28555 - 0.48 11.2 9.0 0.29 11.9 5.6 2.3 2 0 0 2 2 2 0 Complex1_LYR-like DUF4337 PF14235.6 ORF28555 - 2 8.5 7.9 3.8 7.6 7.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF2475 PF10629.9 ORF28537 - 2.4e-07 30.9 0.1 0.096 12.9 0.0 3.5 3 0 0 3 3 3 2 Protein of unknown function (DUF2475) ADH_zinc_N PF00107.26 ORF25061 - 2.8e-13 50.0 0.0 6.2e-13 48.9 0.0 1.5 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF25061 - 2.7e-10 40.1 0.1 5.7e-10 39.0 0.1 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 ORF25061 - 3.2e-07 30.1 0.0 7.1e-07 28.9 0.0 1.5 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 ORF25061 - 0.0012 19.9 0.0 0.0024 18.9 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase RMI2 PF16100.5 ORF21360 - 1.9e-06 27.7 0.0 2.8e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 RecQ-mediated genome instability protein 2 tRNA_anti-codon PF01336.25 ORF21360 - 2.2e-05 24.3 0.0 3.4e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 ORF21360 - 0.014 15.6 0.0 0.024 14.8 0.0 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain FHA PF00498.26 ORF20081 - 3.8e-13 49.6 0.3 1.6e-07 31.5 0.1 2.5 2 0 0 2 2 2 2 FHA domain Yop-YscD_cpl PF16697.5 ORF20081 - 0.0044 17.3 0.0 0.012 15.9 0.0 1.8 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain NAD_Gly3P_dh_C PF07479.14 ORF137056 - 3.4e-53 179.8 1.0 5.8e-53 179.0 1.0 1.3 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 ORF137056 - 2.2e-50 170.7 0.0 3.1e-50 170.2 0.0 1.2 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 ORF137056 - 7.2e-11 41.9 0.0 1.3e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 ORF137056 - 3e-06 27.7 0.0 6.7e-05 23.4 0.0 2.5 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 ORF137056 - 4.5e-05 23.7 0.0 0.00013 22.2 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 ORF137056 - 0.00015 21.4 0.0 0.0013 18.3 0.0 2.3 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIDA PF01134.22 ORF137056 - 0.00054 19.2 0.0 0.00096 18.3 0.0 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A 3HCDH_N PF02737.18 ORF137056 - 0.0016 18.3 0.0 0.0033 17.3 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rossmann-like PF10727.9 ORF137056 - 0.0036 17.2 0.2 0.012 15.4 0.1 2.0 1 1 0 1 1 1 1 Rossmann-like domain NAD_binding_8 PF13450.6 ORF137056 - 0.004 17.3 0.1 0.013 15.7 0.1 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 ORF137056 - 0.0042 17.3 0.0 0.015 15.6 0.0 2.0 2 0 0 2 2 2 1 TrkA-N domain Pyr_redox_2 PF07992.14 ORF137056 - 0.0059 15.9 0.0 0.011 14.9 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase IlvN PF07991.12 ORF137056 - 0.051 13.1 0.0 0.72 9.4 0.0 2.3 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Methyltransf_23 PF13489.6 ORF137056 - 0.088 12.6 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain LAGLIDADG_3 PF14528.6 ORF137056 - 0.11 12.8 0.0 5.9 7.3 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Glyco_transf_4 PF13439.6 ORF137056 - 0.12 12.3 0.0 0.25 11.3 0.0 1.6 1 0 0 1 1 1 0 Glycosyltransferase Family 4 NAD_binding_7 PF13241.6 ORF137056 - 0.17 12.3 0.0 4.8 7.7 0.0 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding FNIP PF05725.12 ORF136041 - 6.7e-28 96.6 21.6 1.7e-08 34.5 0.6 5.5 4 2 1 5 5 5 5 FNIP Repeat LRR_5 PF13306.6 ORF136041 - 5.3e-07 29.7 0.0 0.00046 20.1 0.0 2.4 1 1 1 2 2 2 2 BspA type Leucine rich repeat region (6 copies) Voltage_CLC PF00654.20 ORF13562 - 1.2e-72 245.2 31.1 1.3e-72 245.0 31.1 1.0 1 0 0 1 1 1 1 Voltage gated chloride channel JAB PF01398.21 ORF135386 - 6.8e-34 116.4 0.4 9.3e-32 109.5 0.0 2.5 2 0 0 2 2 2 2 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 ORF135386 - 3.4e-32 111.2 0.9 5.6e-32 110.5 0.9 1.4 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function Fas_alpha_ACP PF18325.1 ORF135386 - 0.015 15.6 0.1 0.026 14.8 0.1 1.3 1 0 0 1 1 1 0 Fatty acid synthase subunit alpha Acyl carrier domain DUF2407 PF10302.9 ORF135386 - 0.49 11.0 2.6 0.28 11.7 0.2 1.8 2 0 0 2 2 2 0 DUF2407 ubiquitin-like domain Acetyltransf_6 PF13480.7 ORF133709 - 0.08 13.1 0.0 0.16 12.2 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain zf-RING_2 PF13639.6 ORF131020 - 6.9e-09 35.9 10.4 6.9e-09 35.9 10.4 1.9 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF131020 - 1.4e-05 25.2 10.2 8.4e-05 22.8 10.2 2.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF131020 - 0.00018 21.4 8.4 0.00037 20.4 8.4 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF131020 - 0.0072 16.2 6.7 0.0072 16.2 6.7 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF131020 - 0.015 15.2 10.1 0.045 13.6 10.1 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF131020 - 0.018 14.9 10.0 0.064 13.1 10.0 2.0 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF131020 - 0.034 13.8 5.6 0.12 12.0 5.6 2.0 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Pex24p PF06398.11 ORF131020 - 0.11 11.5 0.3 0.91 8.4 0.3 2.0 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin Prok-RING_4 PF14447.6 ORF131020 - 0.16 11.9 10.2 2.6 8.0 10.5 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 DUF4834 PF16118.5 ORF131020 - 0.88 10.6 0.0 0.88 10.6 0.0 2.8 3 0 0 3 3 2 0 Domain of unknown function (DUF4834) FANCL_C PF11793.8 ORF131020 - 1.3 9.2 12.4 0.27 11.4 7.7 2.4 2 1 0 2 2 1 0 FANCL C-terminal domain zf-RING_UBOX PF13445.6 ORF131020 - 1.5 8.9 8.9 13 5.9 9.2 2.4 1 1 1 2 2 2 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF131020 - 4.3 7.4 10.9 0.83 9.8 6.3 2.1 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 ORF131020 - 6.9 6.9 15.5 0.39 10.9 9.4 2.0 2 0 0 2 2 2 0 RING-variant domain Hydrolase PF00702.26 ORF12726 - 2.7e-05 24.6 0.0 3.9e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_C PF00689.21 ORF12726 - 0.076 12.7 7.6 0.056 13.2 6.5 1.4 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus DUF4203 PF13886.6 ORF12726 - 0.21 11.2 14.6 0.82 9.3 0.4 2.6 1 1 1 3 3 3 0 Domain of unknown function (DUF4203) HATPase_c PF02518.26 ORF122104 - 1.3e-22 80.4 0.1 2.7e-22 79.4 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF122104 - 6.8e-10 38.8 0.1 2e-09 37.4 0.1 1.9 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF122104 - 0.0049 16.7 0.2 0.01 15.6 0.2 1.6 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase adh_short PF00106.25 ORF118778 - 5.9e-32 110.7 0.0 7.7e-32 110.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF118778 - 4.9e-14 52.5 0.0 6.4e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF118778 - 2.6e-06 27.5 0.2 8.6e-06 25.8 0.2 1.8 1 1 0 1 1 1 1 KR domain GP120 PF00516.18 ORF118778 - 0.0089 14.7 0.0 0.012 14.3 0.0 1.1 1 0 0 1 1 1 1 Envelope glycoprotein GP120 Polysacc_synt_2 PF02719.15 ORF118778 - 0.022 13.9 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 3HCDH_N PF02737.18 ORF118778 - 0.036 13.9 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UBA_4 PF14555.6 ORF111740 - 2e-06 27.5 0.2 3.9e-06 26.6 0.2 1.4 1 0 0 1 1 1 1 UBA-like domain Thioredoxin_7 PF13899.6 ORF111740 - 0.082 13.1 0.1 0.21 11.8 0.1 1.7 1 0 0 1 1 1 0 Thioredoxin-like ssDNA_DBD PF18333.1 ORF10789 - 0.74 9.9 4.1 0.62 10.2 0.1 2.4 2 1 0 2 2 2 0 Non-canonical single-stranded DNA-binding domain Lipase_GDSL_2 PF13472.6 ORF106158 - 1.5e-14 54.8 0.1 2.3e-14 54.2 0.1 1.3 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family CBM_20 PF00686.19 ORF106158 - 3e-11 43.1 0.0 6e-11 42.1 0.0 1.4 1 0 0 1 1 1 1 Starch binding domain B12-binding PF02310.19 ORF106158 - 0.00036 20.5 0.0 0.0008 19.4 0.0 1.5 1 1 0 1 1 1 1 B12 binding domain Lipase_GDSL PF00657.22 ORF106158 - 0.0084 16.1 0.0 0.019 15.0 0.0 1.6 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase RIIa PF02197.17 ORF106158 - 0.014 15.1 0.0 0.037 13.7 0.0 1.7 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit Vut_1 PF02592.15 ORF101602 - 0.0022 18.3 3.1 1.5 9.1 0.5 2.6 2 1 1 3 3 3 2 Putative vitamin uptake transporter BACK PF07707.15 ORF94068 - 9.5e-07 28.9 0.4 2e-06 27.8 0.4 1.6 1 0 0 1 1 1 1 BTB And C-terminal Kelch Oxysterol_BP PF01237.18 ORF88633 - 1.3e-94 317.1 5.6 2.5e-94 316.2 5.6 1.4 1 1 0 1 1 1 1 Oxysterol-binding protein ASXH PF13919.6 ORF88633 - 0.052 13.6 1.1 0.079 13.0 1.1 1.3 1 0 0 1 1 1 0 Asx homology domain Pkinase PF00069.25 ORF85620 - 2.9e-52 177.7 0.0 3.6e-52 177.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85620 - 2.3e-27 95.9 0.0 3.5e-27 95.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF85620 - 0.029 13.7 0.1 0.047 13.0 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF85620 - 0.03 13.9 0.1 0.05 13.2 0.1 1.3 1 0 0 1 1 1 0 RIO1 family Pkinase_fungal PF17667.1 ORF85620 - 0.05 12.4 0.0 0.081 11.7 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF85620 - 0.057 13.3 0.3 1.4 8.8 0.0 2.6 2 1 1 3 3 3 0 Phosphotransferase enzyme family PliI PF16743.5 ORF81228 - 0.016 14.9 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 Periplasmic lysozyme inhibitor of I-type lysozyme Glycophorin_A PF01102.18 ORF81228 - 0.024 14.9 0.2 0.051 13.8 0.2 1.6 1 0 0 1 1 1 0 Glycophorin A DUF2207 PF09972.9 ORF81228 - 0.062 12.0 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) RIFIN PF02009.16 ORF81228 - 0.093 12.6 1.1 0.14 12.1 1.1 1.3 1 0 0 1 1 1 0 Rifin zf-C3HC4_3 PF13920.6 ORF75195 - 3.3e-10 39.7 6.0 4.9e-10 39.1 6.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF75195 - 1.5e-08 34.4 6.0 2.4e-08 33.7 6.0 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF75195 - 0.00013 21.8 6.1 0.0012 18.6 6.9 2.0 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF75195 - 0.00031 21.0 7.9 0.00051 20.3 7.9 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF75195 - 0.0014 18.4 9.1 0.0023 17.8 9.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF75195 - 0.0058 16.4 4.4 0.06 13.1 1.1 2.4 2 0 0 2 2 2 1 RING-like zinc finger Leu_zip PF15294.6 ORF75195 - 0.0069 15.9 4.3 0.01 15.4 4.3 1.2 1 0 0 1 1 1 1 Leucine zipper zf-RING_5 PF14634.6 ORF75195 - 0.011 15.7 7.6 0.019 14.9 7.6 1.4 1 0 0 1 1 1 0 zinc-RING finger domain Activator_LAG-3 PF11498.8 ORF75195 - 0.33 9.9 11.9 0.46 9.4 11.9 1.1 1 0 0 1 1 1 0 Transcriptional activator LAG-3 Exonuc_VII_L PF02601.15 ORF75195 - 0.76 9.3 6.0 1 8.8 6.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit NEMO PF11577.8 ORF75195 - 1.5 8.8 16.9 2.5 8.2 3.7 2.4 1 1 1 2 2 2 0 NF-kappa-B essential modulator NEMO Fmp27_WPPW PF10359.9 ORF75195 - 2.4 6.9 6.1 3.1 6.5 6.1 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain TMF_TATA_bd PF12325.8 ORF75195 - 2.8 8.2 13.8 3.1 8.0 1.8 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding FAM176 PF14851.6 ORF75195 - 3.3 7.4 5.9 5.4 6.7 5.9 1.3 1 0 0 1 1 1 0 FAM176 family RecR PF02132.15 ORF75195 - 3.5 7.3 9.0 0.33 10.6 2.9 2.3 1 1 1 2 2 2 0 RecR protein zf-C3HC4_4 PF15227.6 ORF75195 - 4.5 7.5 7.6 25 5.1 8.0 2.0 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING CBM_20 PF00686.19 ORF64058 - 1.4e-12 47.3 0.6 7.8e-12 44.9 0.1 2.1 2 0 0 2 2 2 1 Starch binding domain GMC_oxred_C PF05199.13 ORF57881 - 2.9e-16 60.3 0.0 4.6e-16 59.6 0.0 1.3 1 0 0 1 1 1 1 GMC oxidoreductase DUF3159 PF11361.8 ORF53997 - 0.12 12.1 2.1 0.66 9.7 0.1 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3159) MscL PF01741.18 ORF53997 - 0.12 12.6 1.4 0.2 11.9 0.3 2.1 2 0 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL Sm_multidrug_ex PF06695.11 ORF53997 - 7.1 7.3 11.5 6.3 7.5 1.0 3.0 2 1 1 3 3 3 0 Putative small multi-drug export protein PdxA PF04166.12 ORF49661 - 5.3e-110 367.3 0.0 6.6e-110 367.0 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA AAA PF00004.29 ORF48744 - 7.1e-05 23.2 0.0 0.00012 22.6 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Zot PF05707.12 ORF48744 - 0.0088 15.7 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) GAF_3 PF13492.6 ORF48744 - 0.039 14.3 0.0 0.11 12.9 0.0 1.7 1 0 0 1 1 1 0 GAF domain DUF4183 PF13799.6 ORF48744 - 0.05 13.4 0.0 0.48 10.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4183) cNMP_binding PF00027.29 ORF41120 - 0.0027 17.8 0.1 0.38 10.9 0.0 2.8 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain DUF2460 PF09343.10 ORF41120 - 0.02 14.4 0.1 0.03 13.8 0.1 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 2217 (DUF2460) TBCC PF07986.12 ORF38896 - 1.6e-27 95.6 0.0 2.8e-27 94.8 0.0 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C TBCC_N PF16752.5 ORF38896 - 3.7e-15 56.4 4.8 3.7e-15 56.4 4.8 2.2 2 0 0 2 2 2 1 Tubulin-specific chaperone C N-terminal domain Cupin_8 PF13621.6 ORF37208 - 8.6e-22 78.1 0.2 1.5e-21 77.3 0.0 1.5 2 0 0 2 2 2 1 Cupin-like domain JmjC PF02373.22 ORF37208 - 7.8e-08 32.8 0.0 1.8e-07 31.6 0.0 1.6 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_1 PF00190.22 ORF37208 - 0.0034 17.0 0.0 0.0047 16.5 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_4 PF08007.12 ORF37208 - 0.074 12.5 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 Cupin superfamily protein Bacteriocin_IIc PF10439.9 ORF32916 - 0.24 11.5 43.2 1.7 8.9 16.6 2.5 2 0 0 2 2 2 0 Bacteriocin class II with double-glycine leader peptide EF-hand_7 PF13499.6 ORF28626 - 1.2e-13 51.3 0.3 1.9e-07 31.4 0.3 3.2 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF28626 - 1.7e-11 43.1 0.8 0.25 11.4 0.0 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_1 PF00036.32 ORF28626 - 3.3e-11 41.9 2.2 0.034 13.7 0.0 4.3 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF28626 - 1.4e-09 37.7 0.1 2.2e-05 24.2 0.2 3.4 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF28626 - 0.0059 16.1 0.3 1.8 8.2 0.0 3.4 3 0 0 3 3 3 1 EF hand PAP1 PF08601.10 ORF28626 - 0.039 13.7 8.5 0.054 13.2 8.5 1.1 1 0 0 1 1 1 0 Transcription factor PAP1 EF-hand_4 PF12763.7 ORF28626 - 0.04 13.9 0.6 0.37 10.8 0.0 2.5 3 0 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand Glyco_hydro_39 PF01229.17 ORF28626 - 0.068 11.7 0.0 0.12 10.9 0.0 1.4 1 1 0 1 1 1 0 Glycosyl hydrolases family 39 Podoplanin PF05808.11 ORF24122 - 0.025 14.7 0.2 0.058 13.5 0.2 1.5 1 1 0 1 1 1 0 Podoplanin FXMRP1_C_core PF12235.8 ORF24122 - 0.27 11.9 5.5 0.54 10.9 5.5 1.6 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal ChlI PF13541.6 ORF15183 - 3.5e-10 39.8 0.1 8.5e-10 38.5 0.0 1.7 2 0 0 2 2 2 1 Subunit ChlI of Mg-chelatase Lon_C PF05362.13 ORF15183 - 5.9e-08 32.5 0.1 1.3e-07 31.4 0.1 1.5 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_25 PF13481.6 ORF15183 - 2.2e-07 30.6 0.1 6.3e-07 29.2 0.1 1.8 1 1 0 1 1 1 1 AAA domain ATPase PF06745.13 ORF15183 - 4.2e-06 26.3 0.0 0.00014 21.2 0.0 2.0 1 1 1 2 2 2 1 KaiC Amidase PF01425.21 ORF150129 - 1.2e-50 172.8 0.4 1.5e-47 162.7 0.3 2.7 2 1 0 2 2 2 2 Amidase Metallophos PF00149.28 ORF149941 - 2.9e-31 109.6 0.1 4.7e-31 108.9 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF149941 - 0.029 14.8 0.4 0.062 13.8 0.4 1.5 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain zf-TAZ PF02135.16 ORF149941 - 0.035 14.6 1.6 0.035 14.6 1.6 2.1 2 0 0 2 2 2 0 TAZ zinc finger EamA PF00892.20 ORF140700 - 7.9e-15 55.2 43.3 7.1e-10 39.2 13.7 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF5411 PF17424.2 ORF140700 - 0.02 14.9 1.8 0.045 13.7 0.3 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5411) Ycf70 PF17382.2 ORF140700 - 0.16 12.4 2.6 0.37 11.2 0.1 2.8 3 0 0 3 3 3 0 Uncharacterized Ycf70-like 2-Hacid_dh_C PF02826.19 ORF140576 - 4.5e-46 156.5 0.0 5.6e-46 156.1 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF140576 - 4.1e-20 71.8 0.0 5.4e-20 71.4 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 ORF140576 - 0.0018 18.5 0.0 0.0051 17.0 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Cpn60_TCP1 PF00118.24 ORF13768 - 2.5e-46 158.4 7.7 3e-46 158.1 7.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family MGAT2 PF05060.14 ORF13768 - 0.28 10.2 0.2 0.43 9.6 0.2 1.2 1 0 0 1 1 1 0 N-acetylglucosaminyltransferase II (MGAT2) DUF1192 PF06698.11 ORF13768 - 1.6 8.9 3.6 1.5 8.9 1.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) Xan_ur_permease PF00860.20 ORF127017 - 2.8e-31 108.6 32.5 3.5e-31 108.3 32.5 1.1 1 0 0 1 1 1 1 Permease family Sulfate_transp PF00916.20 ORF127017 - 0.21 10.3 23.4 0.5 9.1 21.4 2.4 1 1 1 2 2 2 0 Sulfate permease family ALAD PF00490.21 ORF11887 - 3.5e-106 355.0 0.0 3.9e-106 354.8 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Ank_2 PF12796.7 ORF117700 - 7.6e-53 177.0 0.5 5e-16 59.1 0.3 5.1 2 1 3 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF117700 - 6.2e-43 144.6 1.3 1.3e-08 35.2 0.0 7.9 3 3 6 9 9 9 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF117700 - 1.2e-37 123.6 2.1 0.00097 19.4 0.0 9.2 9 0 0 9 9 9 8 Ankyrin repeat Ank PF00023.30 ORF117700 - 1.2e-36 123.6 11.3 6.7e-05 23.2 0.0 9.1 9 0 0 9 9 9 9 Ankyrin repeat Ank_5 PF13857.6 ORF117700 - 3.9e-36 122.6 3.7 7.6e-06 26.1 0.0 7.3 4 2 3 7 7 7 7 Ankyrin repeats (many copies) DUF3107 PF11305.8 ORF117700 - 0.12 12.7 0.0 1.3 9.4 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3107) CLASP_N PF12348.8 ORF117700 - 0.14 11.7 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 CLASP N terminal MycE_N PF17843.1 ORF117700 - 3.3 8.2 5.7 24 5.4 0.1 3.9 3 2 1 5 5 5 0 MycE methyltransferase N-terminal Glyco_hydro_20b PF02838.15 ORF113307 - 0.46 11.3 4.0 4.2 8.2 0.9 2.6 2 1 0 2 2 2 0 Glycosyl hydrolase family 20, domain 2 Rhodanese PF00581.20 ORF106014 - 5.8e-19 68.6 0.1 7.8e-09 36.0 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain WYL_2 PF10902.8 ORF102443 - 0.0071 16.7 0.0 0.012 15.9 0.0 1.4 1 0 0 1 1 1 1 WYL_2, Sm-like SH3 beta-barrel fold Oxysterol_BP PF01237.18 ORF101027 - 1.3e-94 317.1 5.6 2.5e-94 316.2 5.6 1.4 1 1 0 1 1 1 1 Oxysterol-binding protein ASXH PF13919.6 ORF101027 - 0.052 13.6 1.1 0.079 13.0 1.1 1.3 1 0 0 1 1 1 0 Asx homology domain zf-RING_2 PF13639.6 ORF9983 - 3e-08 33.9 15.5 7.1e-08 32.7 15.5 1.7 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF9983 - 0.00043 20.5 13.4 0.0011 19.2 13.4 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain Tmemb_9 PF05434.11 ORF9983 - 0.0025 17.7 0.1 0.0025 17.7 0.1 3.0 3 1 0 3 3 3 1 TMEM9 zf-C3HC4_3 PF13920.6 ORF9983 - 0.004 17.0 12.0 0.0099 15.7 12.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF9983 - 0.011 15.4 12.3 0.031 14.0 12.3 1.8 1 0 0 1 1 1 0 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF9983 - 0.16 11.8 16.2 0.39 10.6 16.2 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF9983 - 0.34 11.0 10.6 3.7 7.7 10.6 2.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger DUF948 PF06103.11 ORF9983 - 3.1 8.1 4.3 5.2 7.4 0.0 2.8 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) zf-RING_4 PF14570.6 ORF9983 - 5.9 6.8 11.0 19 5.1 11.0 1.9 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Ion_trans_2 PF07885.16 ORF98295 - 4.2e-13 49.1 1.6 8.7e-13 48.0 1.6 1.5 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 ORF98295 - 4e-09 36.1 1.9 4.3e-09 35.9 0.9 1.6 2 0 0 2 2 2 1 Ion transport protein cNMP_binding PF00027.29 ORF98295 - 1.6e-08 34.5 0.0 2.6e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain IRK PF01007.20 ORF98295 - 0.11 12.3 0.4 0.2 11.5 0.4 1.4 1 0 0 1 1 1 0 Inward rectifier potassium channel transmembrane domain zf-RING_2 PF13639.6 ORF90604 - 8.3e-13 48.4 8.7 1.5e-12 47.6 6.5 2.4 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF90604 - 2.5e-10 39.9 5.8 2.2e-09 36.9 3.2 3.0 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF90604 - 1.2e-08 35.1 5.4 4.4e-08 33.3 5.4 2.0 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF90604 - 2.4e-08 33.7 6.9 2.4e-08 33.7 6.9 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF90604 - 2.7e-08 33.7 4.2 8.3e-08 32.1 4.2 1.9 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF90604 - 4.2e-08 32.9 6.5 4.2e-08 32.9 6.5 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF90604 - 8.6e-06 25.6 4.9 8.6e-06 25.6 4.9 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF90604 - 1.8e-05 24.5 4.4 6.2e-05 22.8 4.4 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF90604 - 2e-05 24.5 1.9 4.9e-05 23.3 1.9 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF90604 - 0.0013 18.9 5.3 0.012 15.7 5.3 2.4 1 1 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF90604 - 0.0031 17.1 4.7 0.022 14.4 5.1 2.2 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF90604 - 0.0088 15.9 6.9 0.17 11.8 7.1 2.5 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 Baculo_RING PF05883.11 ORF90604 - 0.012 15.6 1.4 0.026 14.5 1.4 1.6 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain zf-C3HC4_5 PF17121.5 ORF90604 - 0.017 15.0 4.9 0.066 13.1 4.9 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 ORF90604 - 0.023 14.6 3.8 0.054 13.4 0.8 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 RINGv PF12906.7 ORF90604 - 0.035 14.2 4.6 0.11 12.6 4.6 1.9 1 0 0 1 1 1 0 RING-variant domain zf-Di19 PF05605.12 ORF90604 - 0.04 14.2 3.8 5.9 7.3 0.7 3.3 2 1 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DUF3074 PF11274.8 ORF90604 - 0.11 12.5 0.3 0.17 11.9 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3074) zf-RING_4 PF14570.6 ORF90604 - 0.25 11.2 4.1 0.93 9.3 4.1 2.0 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-Nse PF11789.8 ORF90604 - 0.56 10.1 9.3 0.59 10.0 4.8 2.6 3 0 0 3 3 3 0 Zinc-finger of the MIZ type in Nse subunit DUF3989 PF13150.6 ORF90604 - 1.1 9.1 3.1 3.6 7.4 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) Aft1_OSA PF11785.8 ORF88931 - 0.0067 16.8 0.9 0.017 15.6 0.9 1.6 1 0 0 1 1 1 1 Aft1 osmotic stress response (OSM) domain Hom_end_hint PF05203.16 ORF88931 - 0.012 15.6 0.3 0.022 14.7 0.3 1.5 1 0 0 1 1 1 0 Hom_end-associated Hint BCL_N PF04714.13 ORF88931 - 0.015 15.4 0.1 0.051 13.6 0.1 2.0 1 0 0 1 1 1 0 BCL7, N-terminal conserver region DUF3934 PF13070.6 ORF87019 - 0.072 13.6 0.0 0.14 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3934) DGF-1_C PF11040.8 ORF87019 - 0.12 12.3 0.2 0.42 10.7 0.2 1.9 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus PfkB PF00294.24 ORF85737 - 9.3e-74 248.4 0.0 1.1e-73 248.2 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase SNF2_N PF00176.23 ORF72246 - 2e-30 105.7 0.6 2.8e-30 105.2 0.6 1.1 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 ORF72246 - 1.2e-20 73.9 0.0 2.2e-20 73.0 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DUF2855 PF11017.8 ORF70811 - 6.2e-41 141.3 0.0 9e-41 140.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2855) Kelch_4 PF13418.6 ORF69724 - 2.3e-17 62.7 7.0 1.8e-06 27.8 0.4 3.7 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF69724 - 4.7e-16 58.4 2.2 1.3e-05 25.3 0.1 3.4 2 1 1 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF69724 - 4.7e-16 58.1 0.5 7.7e-06 25.4 0.1 3.5 3 0 0 3 3 3 3 Kelch motif Kelch_3 PF13415.6 ORF69724 - 2.9e-14 52.9 0.5 1.1e-07 32.0 0.0 4.6 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF69724 - 9e-13 47.6 1.0 3.6e-06 26.7 0.1 4.1 4 1 0 4 4 4 3 Kelch motif Kelch_5 PF13854.6 ORF69724 - 4.6e-12 45.7 0.1 0.016 15.2 0.0 3.4 3 0 0 3 3 3 3 Kelch motif DHHC PF01529.20 ORF63735 - 4e-16 59.3 11.8 6e-16 58.8 11.8 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase DZR PF12773.7 ORF63735 - 0.061 13.4 5.5 0.12 12.4 5.5 1.4 1 0 0 1 1 1 0 Double zinc ribbon Fer4_2 PF12797.7 ORF63735 - 0.81 9.9 4.2 5.6 7.3 1.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Asp PF00026.23 ORF60701 - 3.9e-18 65.9 0.1 4.8e-18 65.6 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF60701 - 0.0033 17.2 0.0 0.0079 16.0 0.0 1.6 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Methyltransf_5 PF01795.19 ORF558 - 1.6e-66 225.0 0.8 2.2e-66 224.5 0.8 1.2 1 0 0 1 1 1 1 MraW methylase family Methyltransf_25 PF13649.6 ORF558 - 0.0014 19.3 0.0 0.0036 18.0 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF558 - 0.011 16.5 0.0 0.04 14.6 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF558 - 0.047 14.3 0.0 0.19 12.4 0.0 2.0 2 1 0 2 2 2 0 Methyltransferase domain Methyltransf_31 PF13847.6 ORF558 - 0.068 13.0 0.5 0.64 9.8 0.5 2.4 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_2 PF00891.18 ORF558 - 0.11 11.8 0.0 0.26 10.6 0.0 1.6 1 0 0 1 1 1 0 O-methyltransferase domain MFA1_2 PF17317.2 ORF46063 - 0.42 10.4 6.3 3.9 7.3 1.7 2.7 2 0 0 2 2 2 0 Mating hormone A-factor 1&2 PhnG PF06754.12 ORF37850 - 1.7e-51 173.9 3.8 2.7e-51 173.2 3.8 1.3 1 0 0 1 1 1 1 Phosphonate metabolism protein PhnG UTRA PF07702.13 ORF37850 - 1.3e-31 109.4 0.2 2.9e-31 108.2 0.0 1.6 2 0 0 2 2 2 1 UTRA domain Amino_oxidase PF01593.24 ORF33222 - 6.8e-15 55.3 0.0 1e-13 51.4 0.0 2.0 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Pyr_redox_2 PF07992.14 ORF33222 - 0.00021 20.6 0.1 0.012 14.8 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF33222 - 0.0005 19.4 0.0 0.00069 18.9 0.0 1.2 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 ORF33222 - 0.00056 19.1 1.5 0.00082 18.5 0.4 1.7 2 0 0 2 2 2 1 Lycopene cyclase protein FAD_binding_2 PF00890.24 ORF33222 - 0.0015 17.7 0.7 0.06 12.4 0.1 2.1 2 0 0 2 2 2 1 FAD binding domain FAD_binding_3 PF01494.19 ORF33222 - 0.0026 17.1 0.2 0.62 9.2 0.0 2.1 2 0 0 2 2 2 2 FAD binding domain NAD_binding_9 PF13454.6 ORF33222 - 0.003 17.6 1.1 0.19 11.7 0.2 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF33222 - 0.0099 14.6 0.4 0.14 10.8 0.4 2.0 2 0 0 2 2 2 1 HI0933-like protein DAO PF01266.24 ORF33222 - 0.012 15.3 10.8 0.41 10.2 10.9 2.3 1 1 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 ORF33222 - 0.036 14.3 1.1 0.18 12.1 1.1 2.1 1 1 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DUF442 PF04273.13 ORF33222 - 0.042 13.9 0.1 0.081 13.0 0.1 1.4 1 0 0 1 1 1 0 Putative phosphatase (DUF442) AlaDh_PNT_C PF01262.21 ORF33222 - 0.1 11.9 0.1 0.17 11.2 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 ORF33222 - 0.12 12.9 0.1 23 5.6 0.1 2.6 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Toprim_C_rpt PF13368.6 ORF32115 - 0.13 12.2 0.0 0.98 9.5 0.0 2.3 2 0 0 2 2 2 0 Topoisomerase C-terminal repeat DUF2975 PF11188.8 ORF30612 - 7.9 6.4 13.7 1.5 8.7 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF2975) EF-hand_1 PF00036.32 ORF30340 - 0.0014 18.0 2.1 0.0015 18.0 0.2 2.1 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF30340 - 0.0069 16.8 0.2 0.02 15.3 0.2 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF30340 - 0.0097 15.7 0.6 0.17 11.8 0.1 2.9 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF30340 - 0.0099 15.7 0.1 0.028 14.3 0.1 1.8 1 0 0 1 1 1 1 EF-hand domain Mistic PF11458.8 ORF30340 - 0.058 13.4 1.0 0.23 11.4 0.1 2.5 2 0 0 2 2 2 0 Membrane-integrating protein Mistic YozE_SAM_like PF06855.12 ORF30340 - 0.1 12.8 0.1 1.9 8.8 0.0 2.4 2 0 0 2 2 2 0 YozE SAM-like fold APG5 PF04106.12 ORF30221 - 2.7e-31 109.0 0.6 3.4e-31 108.6 0.6 1.1 1 0 0 1 1 1 1 Autophagy protein Apg5 BPD_transp_1 PF00528.22 ORF25294 - 6e-21 75.0 23.8 6e-21 75.0 23.8 2.2 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Phage_holin_2_4 PF16082.5 ORF25294 - 4.7 7.0 8.2 0.51 10.1 0.2 2.8 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Pkinase PF00069.25 ORF21967 - 4.2e-77 259.1 0.5 5.2e-77 258.8 0.5 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF21967 - 2.7e-41 141.6 0.1 3.4e-41 141.2 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF21967 - 5.7e-09 35.6 0.1 9e-09 35.0 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF21967 - 6.9e-08 32.1 0.0 9.7e-08 31.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF21967 - 0.00016 21.7 0.0 0.00026 21.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF21967 - 0.0029 16.6 2.3 0.0047 15.9 2.3 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF21967 - 0.0056 15.5 0.1 0.0058 15.5 0.1 1.2 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF21967 - 0.007 16.0 0.1 0.013 15.2 0.1 1.4 1 0 0 1 1 1 1 RIO1 family Choline_kinase PF01633.20 ORF21967 - 0.021 14.4 2.2 0.038 13.6 1.0 2.1 2 1 0 2 2 2 0 Choline/ethanolamine kinase NMT PF01233.19 ORF21967 - 0.2 11.5 1.9 0.38 10.6 0.1 2.1 2 0 0 2 2 2 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Peptidase_C2 PF00648.21 ORF21349 - 1.4e-43 149.1 0.0 2.8e-41 141.5 0.0 2.0 2 0 0 2 2 2 2 Calpain family cysteine protease PPDK_N PF01326.19 ORF16017 - 8.7e-21 74.5 0.0 3.4e-08 33.1 0.0 3.9 2 2 2 4 4 4 4 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DUF3492 PF11997.8 ORF16017 - 0.0023 17.7 0.1 0.0033 17.2 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3492) TPR_1 PF00515.28 ORF151762 - 2.2e-12 46.2 15.4 7.6e-05 22.4 0.8 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF151762 - 1.8e-11 43.2 10.1 0.0025 17.8 0.1 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF151762 - 1.4e-06 28.5 1.9 0.0003 21.0 0.3 2.6 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF151762 - 2.1e-05 24.4 8.5 0.12 12.7 0.1 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF151762 - 0.00067 19.7 9.7 0.1 12.7 0.2 3.2 2 1 1 3 3 3 2 Fis1 C-terminal tetratricopeptide repeat BLOC1_2 PF10046.9 ORF151762 - 0.00083 19.6 1.4 0.00083 19.6 1.4 2.5 2 1 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 TPR_17 PF13431.6 ORF151762 - 0.0044 17.3 4.2 0.021 15.2 0.8 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF151762 - 0.039 14.4 2.5 0.1 13.1 0.3 2.5 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF151762 - 0.092 13.4 2.3 10 7.0 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF151762 - 0.17 11.6 12.2 0.2 11.4 0.6 3.2 3 0 0 3 3 3 0 TPR repeat ALMT PF11744.8 ORF151762 - 0.71 8.6 10.7 1.3 7.7 10.7 1.4 1 0 0 1 1 1 0 Aluminium activated malate transporter Bin3 PF06859.12 ORF151762 - 0.99 10.1 5.0 0.43 11.2 0.8 2.6 1 1 1 2 2 2 0 Bicoid-interacting protein 3 (Bin3) Asp PF00026.23 ORF150615 - 3.9e-18 65.9 0.1 4.8e-18 65.6 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF150615 - 0.0033 17.2 0.0 0.0079 16.0 0.0 1.6 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Glyco_hydro_30 PF02055.16 ORF145782 - 1.1e-47 162.7 0.1 1.4e-47 162.4 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 TIM-barrel domain Glyco_hydro_30C PF17189.4 ORF145782 - 2.1e-10 40.7 0.0 3.2e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 30 beta sandwich domain DUF4038 PF13204.6 ORF145782 - 0.0022 17.7 0.1 0.0032 17.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4038) Aminotran_5 PF00266.19 ORF145446 - 4.9e-06 25.7 0.0 6.2e-06 25.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks50.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks50.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks50.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks50.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:17 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PP2C PF00481.21 ORF136700 - 2.1e-56 191.4 0.1 2.4e-56 191.2 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF136700 - 0.00022 20.9 0.3 0.0012 18.5 0.3 2.1 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF136700 - 0.00058 19.8 0.1 0.0043 17.0 0.1 1.9 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) UXS1_N PF11803.8 ORF133218 - 0.053 13.9 0.1 0.22 11.9 0.1 2.0 2 0 0 2 2 2 0 UDP-glucuronate decarboxylase N-terminal DUF4252 PF14060.6 ORF133218 - 2 8.3 12.0 0.79 9.6 7.9 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4252) FH2 PF02181.23 ORF131803 - 8.5e-32 110.7 0.0 1e-31 110.4 0.0 1.0 1 0 0 1 1 1 1 Formin Homology 2 Domain Ion_trans PF00520.31 ORF128787 - 4.4e-21 75.2 10.5 5.8e-21 74.8 10.5 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF128787 - 0.0058 15.4 11.3 0.014 14.1 0.8 2.2 1 1 1 2 2 2 2 Polycystin cation channel DUF2644 PF10841.8 ORF128787 - 7 7.0 8.8 0.93 9.8 0.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2644) Ion_trans PF00520.31 ORF12824 - 4.4e-21 75.2 10.5 5.8e-21 74.8 10.5 1.1 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF12824 - 0.0058 15.4 11.3 0.014 14.1 0.8 2.2 1 1 1 2 2 2 2 Polycystin cation channel DUF2644 PF10841.8 ORF12824 - 7 7.0 8.8 0.93 9.8 0.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2644) HIP1_clath_bdg PF16515.5 ORF121189 - 0.0005 20.6 2.1 0.0005 20.6 2.1 3.5 2 1 1 3 3 3 1 Clathrin-binding domain of Huntingtin-interacting protein 1 CALCOCO1 PF07888.11 ORF121189 - 0.00066 18.7 19.8 0.00066 18.7 19.8 2.2 2 0 0 2 2 2 1 Calcium binding and coiled-coil domain (CALCOCO1) like CCDC144C PF14915.6 ORF121189 - 0.00072 18.8 15.2 0.00072 18.8 15.2 2.5 2 1 0 2 2 2 1 CCDC144C protein coiled-coil region DUF4200 PF13863.6 ORF121189 - 0.0093 16.4 18.3 0.0093 16.4 18.3 2.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4200) APG6_N PF17675.1 ORF121189 - 0.014 15.9 24.7 0.014 15.9 24.7 3.0 3 1 0 3 3 2 0 Apg6 coiled-coil region bZIP_1 PF00170.21 ORF121189 - 0.015 15.4 4.5 0.015 15.4 4.5 3.8 3 1 1 4 4 4 0 bZIP transcription factor Spc7 PF08317.11 ORF121189 - 0.018 14.0 28.9 0.032 13.1 17.3 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein TPR_MLP1_2 PF07926.12 ORF121189 - 0.018 15.1 32.8 0.21 11.6 0.8 4.3 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein Laminin_II PF06009.12 ORF121189 - 0.022 14.8 1.6 0.022 14.8 1.6 3.2 2 2 1 3 3 3 0 Laminin Domain II JIP_LZII PF16471.5 ORF121189 - 0.025 14.7 17.5 0.12 12.5 0.7 3.8 2 2 1 3 3 3 0 JNK-interacting protein leucine zipper II Lebercilin PF15619.6 ORF121189 - 0.027 14.1 32.6 0.026 14.2 5.7 3.2 2 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease CdvA PF18822.1 ORF121189 - 0.046 13.5 20.0 0.35 10.7 2.2 3.6 2 1 1 3 3 3 0 CdvA-like coiled-coil domain YabA PF06156.13 ORF121189 - 0.055 14.1 0.4 0.055 14.1 0.4 3.3 3 0 0 3 3 3 0 Initiation control protein YabA CENP-F_leu_zip PF10473.9 ORF121189 - 0.082 12.9 33.2 0.52 10.3 4.5 3.3 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FapA PF03961.13 ORF121189 - 0.19 10.3 13.1 1.5 7.4 0.5 2.1 2 0 0 2 2 2 0 Flagellar Assembly Protein A DUF1664 PF07889.12 ORF121189 - 0.23 11.5 12.6 0.24 11.4 2.4 3.2 2 2 2 4 4 3 0 Protein of unknown function (DUF1664) NAPRTase_C PF17956.1 ORF121189 - 0.29 11.6 7.8 0.17 12.3 1.1 2.9 2 2 1 3 3 2 0 Nicotinate phosphoribosyltransferase C-terminal domain AAA_13 PF13166.6 ORF121189 - 0.29 9.7 14.2 0.13 10.9 6.7 2.1 2 0 0 2 2 2 0 AAA domain GIT_CC PF16559.5 ORF121189 - 0.44 10.4 6.5 1.3 8.9 0.3 3.0 2 1 1 3 3 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor SHE3 PF17078.5 ORF121189 - 0.46 10.2 14.5 0.46 10.2 3.6 3.0 2 1 1 3 3 3 0 SWI5-dependent HO expression protein 3 CASP_C PF08172.12 ORF121189 - 0.53 9.6 14.7 0.095 12.0 9.2 2.4 2 1 0 2 2 2 0 CASP C terminal DASH_Dam1 PF08653.10 ORF121189 - 0.7 9.7 2.3 3.5 7.5 0.1 3.0 2 1 2 4 4 3 0 DASH complex subunit Dam1 ING PF12998.7 ORF121189 - 0.99 10.0 11.5 12 6.6 4.5 3.2 2 1 1 3 3 3 0 Inhibitor of growth proteins N-terminal histone-binding DUF4735 PF15882.5 ORF121189 - 1.1 8.7 4.5 0.86 9.0 2.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4735) DUF4763 PF15960.5 ORF121189 - 1.1 8.5 18.3 0.044 13.1 9.0 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4763) DUF948 PF06103.11 ORF121189 - 1.2 9.5 7.0 2.7 8.3 0.4 3.1 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) EzrA PF06160.12 ORF121189 - 1.3 7.2 19.3 0.62 8.2 0.6 2.4 2 1 0 2 2 2 0 Septation ring formation regulator, EzrA FlxA PF14282.6 ORF121189 - 1.9 8.6 10.7 1.1 9.3 3.0 2.7 2 0 0 2 2 2 0 FlxA-like protein DUF4047 PF13256.6 ORF121189 - 3.8 7.7 8.5 0.38 11.0 1.5 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4047) DUF4407 PF14362.6 ORF121189 - 3.8 6.8 23.5 1.1 8.5 1.5 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4407) Cnn_1N PF07989.11 ORF121189 - 4.4 7.5 22.1 2.9 8.1 11.0 3.8 2 2 1 3 3 3 0 Centrosomin N-terminal motif 1 Prominin PF05478.11 ORF121189 - 4.5 5.1 11.5 4.9 5.0 0.2 2.5 2 1 0 2 2 2 0 Prominin DUF812 PF05667.11 ORF121189 - 5.1 5.9 25.3 0.59 9.0 14.7 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF812) LPP PF04728.13 ORF121189 - 5.2 7.5 6.5 4 7.9 0.5 3.5 2 2 2 4 4 4 0 Lipoprotein leucine-zipper DLP_helical PF18709.1 ORF121189 - 8.5 5.5 11.9 0.72 9.0 2.1 2.7 2 1 0 2 2 2 0 Dynamin-like helical domain PRKG1_interact PF15898.5 ORF121189 - 9.8 7.1 28.7 0.037 14.9 12.4 3.3 3 1 0 3 3 2 0 cGMP-dependent protein kinase interacting domain MFS_1 PF07690.16 ORF117595 - 2.1e-23 82.9 49.3 6e-13 48.4 25.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF117595 - 2.6e-22 79.3 25.5 2.6e-14 53.0 2.4 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter ALG3 PF05208.13 ORF112072 - 3.4e-39 135.3 18.5 4.5e-39 134.9 18.5 1.1 1 0 0 1 1 1 1 ALG3 protein Pkinase PF00069.25 ORF108437 - 1.7e-55 188.3 0.0 2e-55 188.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF108437 - 5.6e-41 140.5 0.0 7.7e-41 140.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF108437 - 1.3e-10 41.1 0.0 2.3e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF108437 - 1.1e-05 24.4 0.0 1.9e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF108437 - 0.063 12.6 0.1 0.13 11.6 0.1 1.4 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Cut8 PF08559.10 ORF108437 - 0.13 11.8 0.6 0.92 9.1 0.1 2.3 3 0 0 3 3 3 0 Cut8, nuclear proteasome tether protein Pkinase PF00069.25 ORF102061 - 9.8e-63 212.0 1.8 1.1e-62 211.8 1.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF102061 - 1.4e-20 73.6 0.5 3.2e-20 72.5 0.2 1.6 1 1 1 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF102061 - 8.4e-07 29.2 0.0 1.6e-05 24.9 0.1 2.2 1 1 0 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF102061 - 0.0013 18.4 0.4 0.0032 17.1 0.2 1.7 1 1 1 2 2 2 1 Choline/ethanolamine kinase Kdo PF06293.14 ORF102061 - 0.0061 15.9 0.5 0.014 14.8 0.2 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF102061 - 0.018 13.8 0.2 0.064 12.0 0.1 1.8 2 0 0 2 2 2 0 Fungal protein kinase Aconitase_B_N PF11791.8 ORF102061 - 0.066 13.3 0.0 0.67 10.0 0.0 2.1 2 0 0 2 2 2 0 Aconitate B N-terminal domain SpoIISB_antitox PF14185.6 ORF102061 - 0.066 13.1 0.5 0.94 9.4 0.0 2.9 3 0 0 3 3 3 0 Antitoxin SpoIISB, type II toxin-antitoxin system LigB PF02900.18 ORF101378 - 2e-91 305.8 0.0 2.4e-91 305.6 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase DUF4115 PF13464.6 ORF100251 - 6.4e-24 83.9 0.0 1.6e-23 82.6 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4115) HTH_25 PF13413.6 ORF100251 - 4.5e-15 55.2 0.6 7.1e-15 54.6 0.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 ORF100251 - 1.8e-08 34.6 0.8 1.8e-08 34.6 0.8 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.22 ORF100251 - 1e-07 31.9 0.0 1.9e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 ORF100251 - 2.1e-07 30.9 0.0 3.2e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 ORF100251 - 0.09 12.6 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain DUF4614 PF15391.6 ORF100251 - 2.1 8.3 12.6 20 5.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4614) EF-hand_7 PF13499.6 ORF98743 - 6.3e-13 49.0 0.6 2.3e-07 31.2 0.0 3.4 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF98743 - 7.8e-10 37.9 1.3 0.12 12.4 0.1 4.6 4 0 0 4 4 4 4 EF-hand domain EF-hand_1 PF00036.32 ORF98743 - 2.6e-08 32.8 2.6 0.14 11.7 0.1 4.1 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF98743 - 6e-08 32.4 0.7 3.6e-05 23.5 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF98743 - 0.048 14.0 0.1 22 5.4 0.0 2.9 3 0 0 3 3 3 0 Secreted protein acidic and rich in cysteine Ca binding region VCH_CASS14 PF18315.1 ORF92740 - 0.022 14.8 0.0 0.039 14.0 0.0 1.3 1 0 0 1 1 1 0 Integron cassette protein VCH_CASS1 chain Glycophorin_A PF01102.18 ORF91504 - 0.00035 20.8 0.0 0.0015 18.8 0.0 2.1 2 0 0 2 2 2 1 Glycophorin A TMEM154 PF15102.6 ORF91504 - 0.00048 20.1 0.2 0.0015 18.5 0.0 1.9 2 0 0 2 2 2 1 TMEM154 protein family Protocadherin PF08374.11 ORF91504 - 0.0009 19.3 0.0 0.0016 18.5 0.0 1.4 1 0 0 1 1 1 1 Protocadherin Podoplanin PF05808.11 ORF91504 - 0.047 13.8 0.5 0.079 13.1 0.0 1.6 2 0 0 2 2 2 0 Podoplanin TAS2R PF05296.13 ORF91504 - 0.053 12.6 0.0 0.28 10.2 0.0 1.9 2 0 0 2 2 2 0 Taste receptor protein (TAS2R) UcrQ PF02939.16 ORF91504 - 0.13 12.2 0.3 0.32 10.9 0.1 1.7 2 0 0 2 2 2 0 UcrQ family EphA2_TM PF14575.6 ORF91504 - 0.15 13.0 0.0 0.55 11.1 0.0 2.0 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF4834 PF16118.5 ORF91504 - 0.23 12.4 1.2 0.61 11.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) HAD_2 PF13419.6 ORF87337 - 1.4e-10 41.5 0.0 5e-10 39.7 0.0 1.8 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF87337 - 1.7e-08 35.0 1.2 2.6e-06 27.9 0.0 2.2 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF87337 - 1.5e-05 25.5 0.1 2.1e-05 25.0 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF87337 - 0.0092 16.1 0.1 0.22 11.7 0.0 2.5 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Bestrophin PF01062.21 ORF86327 - 3.8e-26 92.2 0.1 4.5e-26 91.9 0.1 1.0 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel PAP2_C PF14360.6 ORF85321 - 1.1e-06 29.1 3.3 1.1e-06 29.1 3.3 3.4 3 1 0 3 3 3 1 PAP2 superfamily C-terminal DUF2207 PF09972.9 ORF85321 - 0.086 11.6 0.2 0.14 10.9 0.2 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PAP2_3 PF14378.6 ORF85321 - 0.14 11.9 20.1 0.58 9.8 14.8 3.0 1 1 1 2 2 2 0 PAP2 superfamily RINGv PF12906.7 ORF76259 - 1.5e-09 37.8 4.0 4.1e-09 36.4 4.0 1.7 1 0 0 1 1 1 1 RING-variant domain zf-RING_2 PF13639.6 ORF76259 - 0.48 10.8 6.2 1.6 9.2 6.2 1.9 1 0 0 1 1 1 0 Ring finger domain Ion_trans PF00520.31 ORF72015 - 1.4e-15 57.2 7.8 2.2e-15 56.6 7.8 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF72015 - 1.4e-09 37.1 0.4 0.00045 19.9 0.6 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF72015 - 2e-09 36.3 0.5 0.0031 16.9 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF72015 - 3.4e-08 33.8 3.0 3.5e-06 27.4 0.2 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF72015 - 3.2e-07 29.6 1.0 0.0045 16.4 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF72015 - 9.5e-06 25.4 1.5 0.024 14.5 1.1 2.4 2 0 0 2 2 2 2 EF-hand domain pair PKD_channel PF08016.12 ORF72015 - 1.9 7.1 8.2 3.4 6.2 8.2 1.4 1 1 0 1 1 1 0 Polycystin cation channel PAP2_C PF14360.6 ORF64476 - 4.3e-07 30.4 3.3 4.3e-07 30.4 3.3 3.3 3 1 0 3 3 3 1 PAP2 superfamily C-terminal DUF2207 PF09972.9 ORF64476 - 0.078 11.7 0.2 0.14 10.9 0.2 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PAP2_3 PF14378.6 ORF64476 - 0.13 12.0 20.1 0.54 9.9 14.9 3.0 1 1 1 2 2 2 0 PAP2 superfamily FH2 PF02181.23 ORF62986 - 8.4e-32 110.7 0.0 1e-31 110.4 0.0 1.0 1 0 0 1 1 1 1 Formin Homology 2 Domain DUF4378 PF14309.6 ORF61982 - 3.8e-10 40.4 0.2 7.9e-10 39.4 0.1 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4378) GATase_6 PF13522.6 ORF61982 - 0.036 14.2 0.0 3.3 7.9 0.0 2.3 2 0 0 2 2 2 0 Glutamine amidotransferase domain YqgF PF14639.6 ORF61982 - 0.53 10.0 2.4 0.55 10.0 0.1 2.2 3 0 0 3 3 3 0 Holliday-junction resolvase-like of SPT6 zf-GRF PF06839.12 ORF51743 - 2.3e-13 50.0 3.5 3.8e-13 49.3 3.5 1.3 1 0 0 1 1 1 1 GRF zinc finger PLDc_2 PF13091.6 ORF51743 - 4.1e-07 30.0 0.0 7.3e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 PLD-like domain RINGv PF12906.7 ORF51059 - 1.5e-09 37.8 4.0 4.1e-09 36.4 4.0 1.7 1 0 0 1 1 1 1 RING-variant domain zf-RING_2 PF13639.6 ORF51059 - 0.48 10.8 6.2 1.6 9.2 6.2 1.9 1 0 0 1 1 1 0 Ring finger domain adh_short PF00106.25 ORF50499 - 2.8e-32 111.7 0.0 3.7e-32 111.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF50499 - 2.2e-17 63.4 0.0 3e-17 63.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF50499 - 6.1e-06 26.3 0.0 0.047 13.6 0.0 2.3 2 1 0 2 2 2 2 KR domain Ank_4 PF13637.6 ORF50491 - 0.14 12.8 0.4 0.81 10.3 0.1 2.4 3 0 0 3 3 3 0 Ankyrin repeats (many copies) Myotub-related PF06602.14 ORF46224 - 5.9e-88 295.1 3.3 7.5e-88 294.8 3.3 1.1 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain DSPc PF00782.20 ORF46224 - 0.0014 18.4 0.8 0.0036 17.1 0.1 2.1 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 ORF46224 - 0.007 16.4 0.1 0.017 15.1 0.0 1.6 2 0 0 2 2 2 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 ORF46224 - 0.01 15.4 0.4 0.029 13.9 0.0 1.9 2 0 0 2 2 2 0 Protein-tyrosine phosphatase Na_H_Exchanger PF00999.21 ORF42647 - 2.2e-12 46.5 7.5 2.6e-12 46.2 7.5 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TMIE PF16038.5 ORF42647 - 0.21 11.5 0.4 1.1 9.1 0.1 2.4 2 0 0 2 2 2 0 TMIE protein EnY2 PF10163.9 ORF42647 - 0.36 11.2 2.0 1.2 9.5 0.1 2.5 3 0 0 3 3 3 0 Transcription factor e(y)2 TssN PF17555.2 ORF42647 - 7.8 5.8 6.4 12 5.2 6.4 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssN Voltage_CLC PF00654.20 ORF38867 - 1.1e-31 110.4 7.2 1.5e-31 110.0 7.2 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel CBS PF00571.28 ORF38867 - 7.3e-14 52.0 0.1 5.3e-06 26.8 0.0 2.4 2 0 0 2 2 2 2 CBS domain Peptidase_M24 PF00557.24 ORF38754 - 4.5e-44 150.7 0.0 5.3e-44 150.4 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Peptidase_M24_C PF16188.5 ORF38754 - 1.9e-19 69.5 1.2 3.7e-19 68.5 1.2 1.5 1 0 0 1 1 1 1 C-terminal region of peptidase_M24 SET PF00856.28 ORF36051 - 1.2e-11 45.3 0.5 2.7e-09 37.6 0.0 2.2 2 0 0 2 2 2 1 SET domain DUF1682 PF07946.14 ORF36051 - 4.4 6.4 17.5 6.6 5.8 17.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) ATP-synt_C PF00137.21 ORF28138 - 5.9e-17 61.8 6.8 1.4e-16 60.6 6.8 1.6 1 0 0 1 1 1 1 ATP synthase subunit C Na_H_Exchanger PF00999.21 ORF2345 - 2.2e-12 46.5 7.5 2.6e-12 46.2 7.5 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TMIE PF16038.5 ORF2345 - 0.21 11.5 0.4 1.1 9.1 0.1 2.4 2 0 0 2 2 2 0 TMIE protein EnY2 PF10163.9 ORF2345 - 0.36 11.2 2.0 1.2 9.5 0.1 2.5 3 0 0 3 3 3 0 Transcription factor e(y)2 TssN PF17555.2 ORF2345 - 7.8 5.8 6.4 12 5.2 6.4 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssN PAP2_C PF14360.6 ORF2180 - 4.3e-07 30.4 3.3 4.3e-07 30.4 3.3 3.3 3 1 0 3 3 3 1 PAP2 superfamily C-terminal DUF2207 PF09972.9 ORF2180 - 0.078 11.7 0.2 0.14 10.9 0.2 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PAP2_3 PF14378.6 ORF2180 - 0.13 12.0 20.1 0.54 9.9 14.9 3.0 1 1 1 2 2 2 0 PAP2 superfamily EamA PF00892.20 ORF1808 - 4.3e-21 75.5 37.4 3.8e-14 53.0 10.5 2.1 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 ORF1808 - 0.00058 19.3 21.2 0.0011 18.4 21.2 1.5 1 1 0 1 1 1 1 Triose-phosphate Transporter family HRG PF16954.5 ORF1808 - 0.092 13.2 0.6 0.092 13.2 0.6 3.5 4 0 0 4 4 4 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene RseC_MucC PF04246.12 ORF1808 - 3.7 7.5 10.5 0.2 11.6 0.6 3.2 2 1 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC adh_short PF00106.25 ORF17767 - 4.4e-15 55.7 0.0 1.8e-13 50.4 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF17767 - 8.6e-10 38.6 0.1 1.4e-09 37.9 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase RINGv PF12906.7 ORF141448 - 1.5e-09 37.8 4.0 4.1e-09 36.4 4.0 1.7 1 0 0 1 1 1 1 RING-variant domain zf-RING_2 PF13639.6 ORF141448 - 0.48 10.8 6.2 1.6 9.2 6.2 1.9 1 0 0 1 1 1 0 Ring finger domain adh_short PF00106.25 ORF138975 - 4.9e-32 111.0 0.0 6.5e-32 110.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF138975 - 8.8e-15 54.9 0.0 1.2e-14 54.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF138975 - 0.00034 20.6 0.0 0.039 13.9 0.0 2.4 2 1 0 2 2 2 2 KR domain Pyr_redox_2 PF07992.14 ORF138975 - 0.082 12.1 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 ORF138975 - 0.16 11.3 2.9 0.45 9.8 0.1 2.3 2 1 1 3 3 3 0 ThiF family Glycoprotein_G PF00802.19 ORF125904 - 0.87 8.9 4.1 0.25 10.7 0.1 1.9 2 0 0 2 2 2 0 Pneumovirus attachment glycoprotein G DUF5001 PF16392.5 ORF119482 - 4.7 7.2 8.7 1.9 8.4 2.2 2.5 2 0 0 2 2 2 0 Ig-like domain Ank_2 PF12796.7 ORF118655 - 1.5e-55 185.7 11.9 9.7e-17 61.3 0.2 3.9 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF118655 - 2.6e-39 133.1 7.3 1e-10 41.9 0.1 5.2 3 2 2 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF118655 - 3.5e-29 99.9 4.8 0.00049 20.4 0.1 7.6 8 0 0 8 8 8 6 Ankyrin repeat Ank_3 PF13606.6 ORF118655 - 1.1e-28 96.0 0.5 0.001 19.3 0.0 7.6 7 0 0 7 7 7 7 Ankyrin repeat Ank_5 PF13857.6 ORF118655 - 2.6e-25 88.2 11.4 2.4e-05 24.5 0.4 6.9 2 2 5 7 7 7 7 Ankyrin repeats (many copies) YlzJ PF14035.6 ORF118655 - 1.7e-08 34.6 0.0 1.6 9.0 0.0 5.7 2 2 4 6 6 6 3 YlzJ-like protein DHHC PF01529.20 ORF118108 - 6.3e-27 94.3 14.6 6.3e-27 94.3 14.6 2.1 2 0 0 2 2 2 1 DHHC palmitoyltransferase Pex24p PF06398.11 ORF118108 - 0.14 11.1 0.5 0.19 10.7 0.5 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Fer4_18 PF13746.6 ORF110124 - 0.073 13.3 1.0 0.43 10.8 1.8 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain OrfB_Zn_ribbon PF07282.11 ORF110124 - 0.085 12.8 0.6 0.18 11.8 0.6 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Fer4_17 PF13534.6 ORF110124 - 1.8 9.2 6.4 0.43 11.1 2.0 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain Esterase_phd PF10503.9 ORF109587 - 9e-13 48.2 2.1 3.8e-06 26.6 0.1 2.2 2 0 0 2 2 2 2 Esterase PHB depolymerase Hydrolase_4 PF12146.8 ORF109587 - 0.084 12.1 0.9 5.1 6.3 0.5 2.3 1 1 1 2 2 2 0 Serine aminopeptidase, S33 RPAP3_C PF13877.6 ORF106433 - 0.0029 18.1 5.3 0.012 16.1 0.6 2.8 1 1 1 2 2 2 1 Potential Monad-binding region of RPAP3 HALZ PF02183.18 ORF106433 - 0.0079 16.4 17.3 0.019 15.2 3.2 4.2 3 1 1 4 4 4 2 Homeobox associated leucine zipper RepA_C PF04796.12 ORF106433 - 0.028 14.4 1.5 0.75 9.8 0.1 2.3 2 0 0 2 2 2 0 Plasmid encoded RepA protein IL32 PF15225.6 ORF106433 - 0.038 14.4 0.0 0.11 12.9 0.0 1.8 1 0 0 1 1 1 0 Interleukin 32 ZapB PF06005.12 ORF106433 - 0.046 14.2 23.3 5.8 7.4 5.8 4.8 3 2 1 4 4 4 0 Cell division protein ZapB DUF16 PF01519.16 ORF106433 - 0.42 11.1 21.2 0.96 10.0 0.9 3.4 2 1 0 3 3 3 0 Protein of unknown function DUF16 YnfE PF17452.2 ORF106433 - 2.2 8.6 7.4 0.25 11.7 0.9 2.6 3 0 0 3 3 3 0 Uncharacterized YnfE-like YabA PF06156.13 ORF106433 - 2.6 8.8 24.5 0.2 12.3 3.1 4.3 2 1 1 3 3 3 0 Initiation control protein YabA YtxH PF12732.7 ORF106433 - 2.8 8.5 11.9 22 5.7 0.9 4.3 3 1 0 3 3 3 0 YtxH-like protein DUF1664 PF07889.12 ORF106433 - 2.9 8.0 11.4 0.51 10.4 1.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.12 ORF106433 - 8.7 6.4 17.1 0.56 10.3 5.2 3.2 4 0 0 4 4 4 0 TPR/MLP1/MLP2-like protein RPAP3_C PF13877.6 ORF100215 - 0.0029 18.1 5.3 0.012 16.1 0.6 2.8 1 1 1 2 2 2 1 Potential Monad-binding region of RPAP3 HALZ PF02183.18 ORF100215 - 0.0079 16.4 17.3 0.019 15.2 3.2 4.2 3 1 1 4 4 4 2 Homeobox associated leucine zipper RepA_C PF04796.12 ORF100215 - 0.028 14.4 1.5 0.75 9.8 0.1 2.3 2 0 0 2 2 2 0 Plasmid encoded RepA protein IL32 PF15225.6 ORF100215 - 0.038 14.4 0.0 0.11 12.9 0.0 1.8 1 0 0 1 1 1 0 Interleukin 32 ZapB PF06005.12 ORF100215 - 0.046 14.2 23.3 5.8 7.4 5.8 4.8 3 2 1 4 4 4 0 Cell division protein ZapB DUF16 PF01519.16 ORF100215 - 0.42 11.1 21.2 0.96 10.0 0.9 3.4 2 1 0 3 3 3 0 Protein of unknown function DUF16 YnfE PF17452.2 ORF100215 - 2.2 8.6 7.4 0.25 11.7 0.9 2.6 3 0 0 3 3 3 0 Uncharacterized YnfE-like YabA PF06156.13 ORF100215 - 2.6 8.8 24.5 0.2 12.3 3.1 4.3 2 1 1 3 3 3 0 Initiation control protein YabA YtxH PF12732.7 ORF100215 - 2.8 8.5 11.9 22 5.7 0.9 4.3 3 1 0 3 3 3 0 YtxH-like protein DUF1664 PF07889.12 ORF100215 - 2.9 8.0 11.4 0.51 10.4 1.4 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.12 ORF100215 - 8.7 6.4 17.1 0.56 10.3 5.2 3.2 4 0 0 4 4 4 0 TPR/MLP1/MLP2-like protein zf-CCCH PF00642.24 ORF97389 - 6.3e-20 70.6 18.4 4.1e-12 45.7 3.7 2.4 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF97389 - 1.4e-11 43.9 16.5 4.4e-06 26.4 3.9 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger zf_CCCH_4 PF18345.1 ORF97389 - 1e-10 41.3 21.6 5.5e-07 29.4 6.8 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_2 PF14608.6 ORF97389 - 6e-07 29.7 15.0 0.00054 20.3 3.1 2.4 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Torus PF16131.5 ORF97389 - 7.2e-06 26.7 3.8 0.0028 18.3 0.3 2.5 2 0 0 2 2 2 2 Torus domain Fur_reg_FbpA PF13076.6 ORF94552 - 0.0048 16.6 1.3 3.5 7.4 0.2 3.4 3 0 0 3 3 3 2 Fur-regulated basic protein A DUF4302 PF14135.6 ORF94552 - 0.038 13.9 4.0 0.1 12.5 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4302) TPR_2 PF07719.17 ORF92532 - 0.00045 20.1 0.2 0.37 11.0 0.1 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF92532 - 0.44 11.5 3.9 3.6 8.7 0.3 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF92532 - 0.61 9.4 8.8 0.018 14.4 1.9 1.9 2 1 0 2 2 2 0 MalT-like TPR region TPR_6 PF13174.6 ORF92532 - 2.9 8.7 6.4 5.2 7.9 0.0 3.4 4 0 0 4 4 4 0 Tetratricopeptide repeat 2-Hacid_dh_C PF02826.19 ORF92079 - 4.4e-46 156.5 0.0 5.4e-46 156.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF92079 - 4e-20 71.9 0.0 5.3e-20 71.5 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 ORF92079 - 0.0017 18.5 0.0 0.005 17.0 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Peptidase_C26 PF07722.13 ORF90271 - 5.8e-21 75.2 0.0 1.4e-20 74.0 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF90271 - 4.1e-11 43.0 0.0 9.5e-11 41.8 0.0 1.6 1 1 0 1 1 1 1 Glutamine amidotransferase class-I BAR_3_WASP_bdg PF10456.9 ORF90271 - 0.029 13.8 0.1 0.063 12.7 0.1 1.5 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein IU_nuc_hydro PF01156.19 ORF89411 - 2e-21 76.9 0.0 2.4e-21 76.6 0.0 1.2 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase IlvGEDA_leader PF08046.11 ORF8906 - 0.1 12.1 1.2 0.23 10.9 0.2 2.0 2 0 0 2 2 2 0 IlvGEDA operon leader peptide Apelin PF15360.6 ORF8906 - 0.65 10.6 18.4 0.28 11.8 13.0 2.7 2 0 0 2 2 2 0 APJ endogenous ligand TRF PF08558.10 ORF87296 - 0.019 14.6 1.0 0.032 13.8 1.0 1.5 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) tRNA_lig_kinase PF08303.11 ORF87296 - 0.4 10.8 4.5 7.4 6.6 0.4 2.5 2 1 0 2 2 2 0 tRNA ligase kinase domain Bac_luciferase PF00296.20 ORF8313 - 1.9e-36 126.1 0.4 2.1e-35 122.7 0.4 1.9 1 1 0 1 1 1 1 Luciferase-like monooxygenase R3H PF01424.22 ORF82704 - 2.7e-18 65.7 0.0 6.7e-07 29.2 0.0 3.5 3 0 0 3 3 3 3 R3H domain Atg14 PF10186.9 ORF82377 - 0.21 10.6 18.9 0.23 10.5 5.8 2.4 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Golgin_A5 PF09787.9 ORF82377 - 3.1 7.2 31.7 0.03 13.8 12.0 2.6 1 1 0 2 2 2 0 Golgin subfamily A member 5 JIP_LZII PF16471.5 ORF82377 - 3.8 7.7 17.7 1 9.6 0.9 4.0 4 0 0 4 4 4 0 JNK-interacting protein leucine zipper II zf-RING_10 PF16685.5 ORF80680 - 0.096 12.8 0.6 0.2 11.8 0.6 1.4 1 0 0 1 1 1 0 zinc RING finger of MSL2 GP11 PF08677.10 ORF80680 - 0.19 11.2 0.2 0.29 10.6 0.2 1.2 1 0 0 1 1 1 0 GP11 baseplate wedge protein C_GCAxxG_C_C PF09719.10 ORF80680 - 2.7 8.3 5.8 5.3 7.4 5.8 1.4 1 0 0 1 1 1 0 Putative redox-active protein (C_GCAxxG_C_C) zf-RING_10 PF16685.5 ORF7972 - 0.096 12.8 0.6 0.2 11.8 0.6 1.4 1 0 0 1 1 1 0 zinc RING finger of MSL2 GP11 PF08677.10 ORF7972 - 0.19 11.2 0.2 0.29 10.6 0.2 1.2 1 0 0 1 1 1 0 GP11 baseplate wedge protein C_GCAxxG_C_C PF09719.10 ORF7972 - 2.7 8.3 5.8 5.3 7.4 5.8 1.4 1 0 0 1 1 1 0 Putative redox-active protein (C_GCAxxG_C_C) RRM_1 PF00076.22 ORF73727 - 1.2e-08 34.6 0.1 7.2e-08 32.1 0.0 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2-Hacid_dh_C PF02826.19 ORF71454 - 4.4e-46 156.5 0.0 5.4e-46 156.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF71454 - 4e-20 71.9 0.0 5.3e-20 71.5 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 ORF71454 - 0.0017 18.5 0.0 0.005 17.0 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pkinase PF00069.25 ORF70019 - 3e-60 203.8 1.2 4.1e-60 203.4 1.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF70019 - 3.3e-36 124.9 0.3 4.4e-36 124.5 0.3 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF70019 - 5.1e-07 29.3 0.1 1.1e-06 28.1 0.0 1.7 2 0 0 2 2 2 1 Kinase-like PIP49_C PF12260.8 ORF70019 - 2.7e-05 23.9 0.1 7.8e-05 22.4 0.0 1.7 2 0 0 2 2 2 1 Protein-kinase domain of FAM69 ABC1 PF03109.16 ORF70019 - 0.0016 18.6 0.3 0.009 16.2 0.0 2.3 2 1 1 3 3 3 1 ABC1 family Pkinase_fungal PF17667.1 ORF70019 - 0.0026 16.6 0.0 0.0046 15.8 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF70019 - 0.091 12.1 0.3 0.18 11.2 0.3 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Cauli_DNA-bind PF03310.13 ORF70019 - 1.3 9.1 5.9 0.4 10.7 0.4 2.6 3 1 0 3 3 3 0 Caulimovirus DNA-binding protein DUF3841 PF12952.7 ORF68721 - 8.4e-07 28.9 0.5 8.1e-06 25.7 0.5 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF3841) DSPc PF00782.20 ORF67161 - 1.3e-24 86.5 0.0 1.9e-24 86.0 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF67161 - 0.05 13.2 0.0 0.071 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase zf-CCCH PF00642.24 ORF66066 - 6.3e-20 70.6 18.4 4.1e-12 45.7 3.7 2.4 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF66066 - 1.4e-11 43.9 16.5 4.4e-06 26.4 3.9 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger zf_CCCH_4 PF18345.1 ORF66066 - 1e-10 41.3 21.6 5.5e-07 29.4 6.8 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_2 PF14608.6 ORF66066 - 6e-07 29.7 15.0 0.00054 20.3 3.1 2.4 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger Torus PF16131.5 ORF66066 - 7.2e-06 26.7 3.8 0.0028 18.3 0.3 2.5 2 0 0 2 2 2 2 Torus domain Semialdhyde_dhC PF02774.18 ORF66048 - 6e-49 166.6 0.0 9e-49 166.0 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 ORF66048 - 3.8e-32 111.3 0.3 1.7e-31 109.2 0.2 2.1 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain DXP_reductoisom PF02670.16 ORF66048 - 0.001 19.8 0.2 0.58 10.9 0.1 2.7 1 1 1 2 2 2 2 1-deoxy-D-xylulose 5-phosphate reductoisomerase F420_oxidored PF03807.17 ORF66048 - 0.0048 17.5 0.6 0.015 15.9 0.3 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent ROF PF07073.12 ORF66048 - 0.0063 16.7 0.3 0.28 11.4 0.0 2.3 2 0 0 2 2 2 1 Modulator of Rho-dependent transcription termination (ROF) DapB_N PF01113.20 ORF66048 - 0.012 15.7 0.2 0.028 14.5 0.2 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 ORF66048 - 0.051 14.4 0.1 0.13 13.1 0.1 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 ORF66048 - 0.053 14.2 0.0 0.14 12.8 0.0 1.6 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF66048 - 0.079 13.2 0.1 0.19 12.0 0.1 1.7 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Gp_dh_C PF02800.20 ORF66048 - 0.09 12.4 0.0 0.21 11.2 0.0 1.6 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ldh_1_N PF00056.23 ORF66048 - 0.1 12.7 0.1 0.24 11.5 0.1 1.7 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain NOG1 PF06858.14 ORF46236 - 1.2e-13 50.6 0.0 4e-13 48.9 0.0 1.9 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 ORF46236 - 6.7e-12 45.5 0.0 1.1e-11 44.7 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF46236 - 0.00058 19.4 0.0 0.00097 18.7 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF46236 - 0.0009 19.2 0.1 0.019 14.8 0.1 2.4 2 1 0 2 2 2 1 RsgA GTPase AAA_15 PF13175.6 ORF46236 - 0.0083 15.9 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain Dynamin_N PF00350.23 ORF46236 - 0.031 14.3 0.2 11 6.1 0.2 2.4 1 1 1 2 2 2 0 Dynamin family AAA_16 PF13191.6 ORF46236 - 0.095 13.1 0.1 0.79 10.1 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain Roc PF08477.13 ORF46236 - 0.18 12.0 0.0 0.36 11.1 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1_Xtn PF16897.5 ORF46236 - 0.2 11.7 0.0 0.35 10.9 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain EamA PF00892.20 ORF45448 - 5.8e-25 88.1 28.5 1.1e-13 51.5 10.6 2.1 2 0 0 2 2 2 2 EamA-like transporter family 2-Hacid_dh_C PF02826.19 ORF30589 - 4.4e-46 156.5 0.0 5.4e-46 156.2 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 ORF30589 - 4e-20 71.9 0.0 5.3e-20 71.5 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 ORF30589 - 0.0017 18.5 0.0 0.005 17.0 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Cyclin PF08613.11 ORF26373 - 4.5e-26 92.1 3.4 4.5e-26 92.1 3.4 2.0 2 1 0 2 2 2 1 Cyclin Cyclin_N PF00134.23 ORF26373 - 3.7e-10 39.6 1.9 7.4e-10 38.7 1.9 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain MMU163 PF17119.5 ORF26373 - 0.15 11.2 0.2 0.28 10.3 0.2 1.4 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis MORN PF02493.20 ORF24894 - 4.1e-46 152.2 69.0 6.6e-08 32.0 0.9 9.8 10 0 0 10 10 10 9 MORN repeat ID PF18543.1 ORF24894 - 0.055 13.5 1.5 6.6 6.8 0.3 3.9 4 1 1 5 5 5 0 Intracellular delivery domain DUF3048_C PF17479.2 ORF24894 - 1.7 9.1 20.5 4.5 7.7 0.9 5.1 1 1 3 5 5 5 0 Protein of unknown function (DUF3048) C-terminal domain TRAUB PF08164.12 ORF17860 - 1.8e-17 63.6 0.1 4e-17 62.5 0.1 1.7 1 0 0 1 1 1 1 Apoptosis-antagonizing transcription factor, C-terminal AATF-Che1 PF13339.6 ORF17860 - 1.4e-10 42.0 0.2 7.9e-10 39.6 0.2 2.2 1 1 0 1 1 1 1 Apoptosis antagonizing transcription factor DNA_pol3_delta2 PF13177.6 ORF17860 - 0.062 13.1 0.0 0.072 12.9 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Chloroa_b-bind PF00504.21 ORF148191 - 1.6e-43 149.1 0.1 2.9e-26 92.9 0.0 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein 3Beta_HSD PF01073.19 ORF148186 - 2e-24 86.1 0.0 2.5e-24 85.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF148186 - 6e-23 81.6 0.0 1e-22 80.8 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF148186 - 2.6e-18 66.5 0.0 3.5e-18 66.1 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 ORF148186 - 1.1e-13 51.0 0.0 1.6e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 ORF148186 - 5.4e-11 42.7 0.0 8.3e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding Polysacc_synt_2 PF02719.15 ORF148186 - 1.7e-10 40.6 0.0 2.7e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF148186 - 0.00022 21.2 0.0 0.00048 20.1 0.0 1.5 1 1 0 1 1 1 1 KR domain RmlD_sub_bind PF04321.17 ORF148186 - 0.0076 15.4 0.0 0.015 14.4 0.0 1.5 1 1 0 1 1 1 1 RmlD substrate binding domain adh_short PF00106.25 ORF148186 - 0.0081 15.6 0.0 0.034 13.6 0.0 1.8 2 0 0 2 2 2 1 short chain dehydrogenase DapB_N PF01113.20 ORF148186 - 0.043 13.9 0.1 0.69 10.0 0.0 2.1 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus NmrA PF05368.13 ORF148186 - 0.063 12.8 0.0 0.15 11.6 0.0 1.6 2 0 0 2 2 2 0 NmrA-like family Sacchrp_dh_NADP PF03435.18 ORF148186 - 0.1 12.9 0.0 0.44 10.8 0.0 2.0 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Phage_holin_2_4 PF16082.5 ORF146226 - 0.025 14.3 1.2 0.27 11.0 0.5 2.8 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Cyd_oper_YbgE PF09600.10 ORF146226 - 0.034 14.5 0.7 0.073 13.4 0.7 1.5 1 0 0 1 1 1 0 Cyd operon protein YbgE (Cyd_oper_YbgE) DUF4381 PF14316.6 ORF146226 - 0.17 12.1 0.1 0.31 11.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Podoplanin PF05808.11 ORF146226 - 0.18 11.9 0.1 0.18 11.9 0.1 2.1 3 0 0 3 3 3 0 Podoplanin SecE PF00584.20 ORF146226 - 0.76 9.8 3.2 1.6 8.7 3.2 1.5 1 0 0 1 1 1 0 SecE/Sec61-gamma subunits of protein translocation complex DUF4083 PF13314.6 ORF146226 - 3.1 7.8 10.0 0.25 11.3 4.6 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4083) Glycophorin_A PF01102.18 ORF146226 - 3.4 7.9 6.1 0.99 9.7 2.1 2.1 2 1 0 2 2 2 0 Glycophorin A 2OG-FeII_Oxy_3 PF13640.6 ORF14475 - 1.5e-07 32.2 0.0 2.6e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily ESP PF16590.5 ORF140128 - 0.92 9.8 5.9 3.2 8.1 5.6 2.2 1 1 0 1 1 1 0 Exocrine gland-secreting peptide Asp PF00026.23 ORF137462 - 5.8e-21 75.2 0.1 7e-21 75.0 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF137462 - 0.00024 20.9 0.0 0.0004 20.2 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal RNB PF00773.19 ORF136636 - 1.8e-15 57.1 0.1 2.7e-15 56.5 0.1 1.2 1 0 0 1 1 1 1 RNB domain UspA1_rep PF18792.1 ORF136204 - 0.056 13.9 2.5 0.19 12.3 2.5 2.0 1 0 0 1 1 1 0 Ubiquitous surface protein adhesin repeat CENP-N PF05238.13 ORF136204 - 0.14 11.4 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Kinetochore protein CHL4 like zf-rbx1 PF12678.7 ORF135901 - 2.6e-10 40.4 0.5 7e-10 39.0 0.5 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 ORF135901 - 4.7e-10 39.6 0.7 4.7e-10 39.6 0.7 2.3 2 1 0 2 2 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF135901 - 7.4e-07 28.8 1.8 0.00011 21.8 0.3 2.6 2 0 0 2 2 2 2 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF135901 - 1.7e-06 27.9 1.8 1.7e-06 27.9 1.8 2.4 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF135901 - 2.5e-06 27.2 0.2 2.5e-06 27.2 0.2 2.8 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF135901 - 7.1e-05 22.6 2.9 8.2e-05 22.4 0.1 2.5 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF135901 - 7.9e-05 22.4 0.4 0.00021 21.1 0.4 1.7 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF135901 - 9.6e-05 22.3 0.4 9.6e-05 22.3 0.4 2.4 3 0 0 3 3 3 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF135901 - 0.00023 20.7 0.8 0.00075 19.1 0.1 2.2 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF135901 - 0.00057 19.9 0.1 0.0012 18.9 0.1 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 ORF135901 - 0.0025 17.9 0.1 0.0025 17.9 0.1 2.6 3 0 0 3 3 3 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 ORF135901 - 0.005 16.7 0.5 0.005 16.7 0.5 2.6 3 1 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) CBP_BcsF PF11120.8 ORF135901 - 0.22 11.6 0.0 0.22 11.6 0.0 2.4 2 0 0 2 2 1 0 Cellulose biosynthesis protein BcsF Inhibitor_I29 PF08246.12 ORF135901 - 0.5 10.8 2.3 0.91 10.0 2.3 1.4 1 0 0 1 1 1 0 Cathepsin propeptide inhibitor domain (I29) Pkinase PF00069.25 ORF134450 - 1e-43 149.6 0.2 1.4e-43 149.2 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF134450 - 3.5e-25 88.8 0.0 4.7e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF134450 - 7.9e-10 38.4 0.1 1.6e-09 37.5 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF134450 - 1.6e-07 31.5 0.0 0.0028 17.6 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF134450 - 9.9e-06 25.3 0.1 1.8e-05 24.4 0.1 1.4 1 0 0 1 1 1 1 RIO1 family Kinase-like PF14531.6 ORF134450 - 2.3e-05 23.9 0.0 4.8e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 Kinase-like Choline_kinase PF01633.20 ORF134450 - 9.4e-05 22.1 1.0 0.00031 20.4 0.9 1.7 1 1 0 1 1 1 1 Choline/ethanolamine kinase DUF1679 PF07914.11 ORF134450 - 0.0033 16.4 0.4 0.072 11.9 0.3 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF1679) RRM_1 PF00076.22 ORF133491 - 1.2e-08 34.6 0.1 7.2e-08 32.1 0.0 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Sec23_trunk PF04811.15 ORF131927 - 3.9e-05 23.3 0.0 0.00011 21.9 0.0 1.8 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 ORF131927 - 0.00064 20.4 0.0 0.0013 19.4 0.0 1.6 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain ARID PF01388.21 ORF131927 - 0.019 15.6 0.0 0.067 13.9 0.0 1.9 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain Usher PF00577.20 ORF131798 - 3.2e-50 171.5 10.0 3.7e-50 171.3 10.0 1.0 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF131798 - 1.7e-09 37.4 0.0 4.2e-09 36.1 0.0 1.7 1 0 0 1 1 1 1 PapC C-terminal domain Ago_N_1 PF18351.1 ORF128890 - 0.6 10.6 5.0 0.42 11.1 0.6 2.8 3 0 0 3 3 3 0 Fungal Argonaute N-terminal domain DX PF01666.17 ORF128890 - 0.86 10.1 5.9 2.3 8.8 0.2 2.6 2 1 0 2 2 2 0 DX module OAS1_C PF10421.9 ORF126690 - 0.00051 19.6 0.0 0.00078 19.0 0.0 1.2 1 0 0 1 1 1 1 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus Xpo1 PF08389.12 ORF126655 - 0.00086 19.4 0.4 0.29 11.2 0.1 2.6 2 1 0 2 2 2 2 Exportin 1-like protein CLASP_N PF12348.8 ORF126655 - 0.075 12.6 0.1 4.2 6.9 0.0 2.5 2 0 0 2 2 2 0 CLASP N terminal DUF1804 PF08822.11 ORF126655 - 0.077 13.0 0.0 25 4.8 0.0 3.0 2 2 0 2 2 2 0 Protein of unknown function (DUF1804) OAD_gamma PF04277.13 ORF12586 - 8.5 7.1 10.6 0.18 12.4 1.3 2.7 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain DUF996 PF06195.13 ORF125779 - 0.01 16.1 5.9 0.12 12.7 0.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF996) DUF2207 PF09972.9 ORF125779 - 0.05 12.4 6.9 3.4 6.3 7.1 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Oxidored_q3 PF00499.20 ORF125779 - 0.1 12.3 4.5 0.59 9.8 5.5 1.6 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PAP2_3 PF14378.6 ORF125779 - 0.24 11.1 2.8 1.3 8.7 0.1 2.1 1 1 1 2 2 2 0 PAP2 superfamily Sigma_reg_N PF13800.6 ORF125779 - 0.72 10.2 7.6 0.1 12.9 1.4 2.8 1 1 3 4 4 4 0 Sigma factor regulator N-terminal AgrB PF04647.15 ORF125779 - 1.1 8.6 13.6 0.074 12.3 5.8 2.4 1 1 2 3 3 3 0 Accessory gene regulator B Sec23_trunk PF04811.15 ORF118011 - 3.9e-05 23.3 0.0 0.00011 21.9 0.0 1.8 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 ORF118011 - 0.00064 20.4 0.0 0.0013 19.4 0.0 1.6 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain ARID PF01388.21 ORF118011 - 0.019 15.6 0.0 0.067 13.9 0.0 1.9 1 0 0 1 1 1 0 ARID/BRIGHT DNA binding domain V-set_2 PF15910.5 ORF1143 - 0.044 13.9 0.7 0.086 12.9 0.7 1.4 1 0 0 1 1 1 0 ICOS V-set domain Lipase_3 PF01764.25 ORF113077 - 5.9e-12 45.6 0.0 8.2e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF3089 PF11288.8 ORF113077 - 0.11 12.1 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) Abhydrolase_6 PF12697.7 ORF113077 - 0.17 12.5 3.0 0.23 12.1 2.1 1.6 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF2358 PF10184.9 NODE_19433_length_1000_cov_82.338860_g14857_i0forward_frame_1 - 0.064 13.5 0.8 0.27 11.5 0.1 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2358) Asp PF00026.23 ORF83769 - 8.3e-05 22.2 0.0 0.012 15.1 0.0 2.7 1 1 1 2 2 2 2 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF83769 - 0.0045 16.8 0.0 0.0081 16.0 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Tme5_EGF_like PF09064.10 ORF83769 - 0.42 10.6 1.5 0.49 10.3 0.3 1.7 2 0 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like DHHC PF01529.20 ORF83216 - 3e-33 114.8 11.2 3e-33 114.8 11.2 2.0 2 0 0 2 2 2 1 DHHC palmitoyltransferase NDUFB10 PF10249.9 ORF83216 - 1.1 9.8 6.3 1.9 9.0 6.3 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit 10 Ank_2 PF12796.7 ORF78840 - 2.2e-37 127.5 0.5 1.1e-12 48.4 0.1 4.0 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF78840 - 7.1e-24 83.6 1.7 0.015 15.6 0.0 7.1 3 1 4 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF78840 - 8.5e-24 81.0 0.0 0.011 16.2 0.0 6.6 7 0 0 7 7 7 6 Ankyrin repeat Ank PF00023.30 ORF78840 - 1.7e-21 75.7 1.2 0.0067 16.8 0.0 6.4 5 1 1 6 6 6 5 Ankyrin repeat Ank_4 PF13637.6 ORF78840 - 9.4e-18 64.3 0.8 0.00012 22.5 0.0 4.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) DUF2407 PF10302.9 ORF78840 - 0.039 14.5 0.0 0.08 13.5 0.0 1.5 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain PFK PF00365.20 ORF78311 - 3.1e-43 148.2 0.4 3.8e-43 147.9 0.4 1.1 1 0 0 1 1 1 1 Phosphofructokinase DAGK_cat PF00781.24 ORF78311 - 0.0069 16.0 0.0 0.014 15.0 0.0 1.6 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain TonB_dep_Rec PF00593.24 ORF7815 - 2.1e-59 202.6 21.5 2.6e-59 202.4 21.5 1.0 1 0 0 1 1 1 1 TonB dependent receptor DUF560 PF04575.13 ORF7815 - 0.022 14.2 0.6 2.9 7.3 0.2 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF560) OMP_b-brl PF13505.6 ORF7815 - 1.9 8.6 15.7 1.5 8.9 11.4 2.6 1 1 1 2 2 2 0 Outer membrane protein beta-barrel domain TMEM154 PF15102.6 ORF77181 - 0.0032 17.4 0.3 0.0032 17.4 0.3 2.3 3 0 0 3 3 3 1 TMEM154 protein family Amnionless PF14828.6 ORF77181 - 0.0054 15.6 0.1 0.007 15.2 0.1 1.2 1 0 0 1 1 1 1 Amnionless RIFIN PF02009.16 ORF77181 - 0.0069 16.3 1.7 0.013 15.4 1.7 1.5 1 1 0 1 1 1 1 Rifin RIC3 PF15361.6 ORF77181 - 0.017 15.5 0.0 0.026 14.9 0.0 1.3 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 Glycophorin_A PF01102.18 ORF77181 - 0.034 14.4 0.3 0.034 14.4 0.3 2.0 2 1 0 2 2 2 0 Glycophorin A DUF4064 PF13273.6 ORF77181 - 0.048 13.9 0.4 0.13 12.6 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Orf78 PF06024.12 ORF77181 - 0.065 13.5 1.7 0.1 12.9 0.1 2.1 2 1 0 2 2 2 0 Orf78 (ac78) DUF485 PF04341.12 ORF77181 - 0.096 12.6 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF2407_C PF13373.6 ORF77181 - 0.13 12.4 0.4 0.32 11.2 0.0 1.8 1 1 1 2 2 2 0 DUF2407 C-terminal domain Podoplanin PF05808.11 ORF77181 - 1 9.4 11.9 0.022 14.9 3.7 2.2 3 0 0 3 3 3 0 Podoplanin CsgF PF10614.9 ORF7605 - 0.47 10.7 1.0 0.74 10.0 0.3 1.5 2 0 0 2 2 2 0 Type VIII secretion system (T8SS), CsgF protein DUF3682 PF12446.8 ORF74167 - 0.22 12.0 4.9 0.34 11.4 4.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3682) Homeodomain PF00046.29 ORF72473 - 2.4e-05 24.1 3.8 5.5e-05 22.9 3.8 1.6 1 0 0 1 1 1 1 Homeodomain Connexin43 PF03508.13 ORF72473 - 0.0019 17.7 0.8 0.0019 17.7 0.8 2.1 2 0 0 2 2 2 1 Gap junction alpha-1 protein (Cx43) TraF PF13728.6 ORF72473 - 0.3 10.9 6.8 1.5 8.6 2.5 2.3 2 0 0 2 2 2 0 F plasmid transfer operon protein RRM_1 PF00076.22 ORF71775 - 3.5e-17 62.0 0.0 7.4e-11 41.7 0.0 2.5 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Flagellar_put PF12611.8 ORF71775 - 0.063 13.0 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 Putative flagellar FecCD PF01032.18 ORF6575 - 6.1e-84 281.7 39.3 7.2e-84 281.4 39.3 1.0 1 0 0 1 1 1 1 FecCD transport family Thioredoxin PF00085.20 ORF63193 - 1.9e-21 76.0 0.0 5.1e-21 74.6 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF63193 - 5.7e-05 23.5 0.4 0.00026 21.4 0.0 2.1 2 0 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF63193 - 0.00026 21.1 0.8 0.00044 20.4 0.0 1.8 2 0 0 2 2 1 1 Thioredoxin-like DUF2203 PF09969.9 ORF63193 - 0.011 16.4 3.1 0.027 15.2 3.1 1.6 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) zf-CpG_bind_C PF12269.8 ORF63193 - 0.022 14.6 4.4 0.035 13.9 4.4 1.3 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain OST3_OST6 PF04756.13 ORF63193 - 0.037 13.4 0.0 0.054 12.9 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family HemX PF04375.14 ORF63193 - 0.076 12.3 5.3 0.11 11.8 5.3 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase OmpH PF03938.14 ORF63193 - 0.078 13.3 10.9 0.15 12.4 10.9 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF1160 PF06648.11 ORF63193 - 0.081 12.9 0.4 0.14 12.2 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) V_ATPase_I PF01496.19 ORF63193 - 0.12 10.3 2.6 0.15 10.0 2.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RmuC PF02646.16 ORF63193 - 0.12 11.5 7.9 0.017 14.2 4.0 1.5 2 0 0 2 2 2 0 RmuC family Thioredoxin_8 PF13905.6 ORF63193 - 0.15 12.4 0.2 0.48 10.8 0.0 2.0 2 0 0 2 2 2 0 Thioredoxin-like AAA_23 PF13476.6 ORF63193 - 0.16 12.5 8.4 0.25 11.8 8.4 1.3 1 0 0 1 1 1 0 AAA domain Flavodoxin_4 PF12682.7 ORF63193 - 0.19 11.5 0.0 0.44 10.2 0.0 1.6 1 0 0 1 1 1 0 Flavodoxin DUF4355 PF14265.6 ORF63193 - 0.21 11.9 13.0 0.36 11.1 13.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4355) DivIC PF04977.15 ORF63193 - 1.3 8.8 10.2 3.7 7.4 10.2 1.7 1 0 0 1 1 1 0 Septum formation initiator DUF4404 PF14357.6 ORF63193 - 1.4 9.6 8.2 4.7 7.9 7.7 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) Katanin_con80 PF13925.6 ORF63193 - 2.4 8.2 5.9 0.7 9.9 3.1 1.5 2 0 0 2 2 1 0 con80 domain of Katanin DUF4140 PF13600.6 ORF63193 - 2.8 8.4 6.1 5.7 7.4 6.1 1.4 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Atg14 PF10186.9 ORF63193 - 6.8 5.7 8.9 9.7 5.2 8.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ECM11 PF15463.6 ORF63193 - 6.8 7.3 11.7 0.67 10.5 6.7 1.8 2 0 0 2 2 2 0 Extracellular mutant protein 11 NPL PF17800.1 ORF62609 - 4.5e-07 30.4 0.0 4.5e-07 30.4 0.0 3.1 2 1 0 2 2 2 1 Nucleoplasmin-like domain tRNA-synt_1b PF00579.25 ORF58647 - 3.8e-90 302.2 0.0 4.6e-90 301.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) START PF01852.19 ORF55909 - 1e-11 44.7 0.0 2e-11 43.7 0.0 1.4 1 0 0 1 1 1 1 START domain BNR_3 PF13859.6 ORF55909 - 0.82 8.9 6.5 0.24 10.7 2.1 2.2 2 1 0 2 2 2 0 BNR repeat-like domain Lipase_3 PF01764.25 ORF51767 - 5.9e-12 45.7 0.0 8.2e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Zn_Tnp_IS1595 PF12760.7 ORF51767 - 0.035 14.1 4.0 1.3 9.1 0.7 3.0 3 0 0 3 3 3 0 Transposase zinc-ribbon domain DUF3089 PF11288.8 ORF51767 - 0.1 12.1 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) Abhydrolase_6 PF12697.7 ORF51767 - 0.35 11.4 5.5 0.83 10.2 5.5 1.8 1 1 0 1 1 1 0 Alpha/beta hydrolase family TMEM154 PF15102.6 ORF50117 - 0.0032 17.4 0.3 0.0032 17.4 0.3 2.3 3 0 0 3 3 3 1 TMEM154 protein family Amnionless PF14828.6 ORF50117 - 0.0054 15.6 0.1 0.007 15.2 0.1 1.2 1 0 0 1 1 1 1 Amnionless RIFIN PF02009.16 ORF50117 - 0.0069 16.3 1.7 0.013 15.4 1.7 1.5 1 1 0 1 1 1 1 Rifin RIC3 PF15361.6 ORF50117 - 0.017 15.5 0.0 0.026 14.9 0.0 1.3 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 Glycophorin_A PF01102.18 ORF50117 - 0.034 14.4 0.3 0.034 14.4 0.3 2.0 2 1 0 2 2 2 0 Glycophorin A DUF4064 PF13273.6 ORF50117 - 0.048 13.9 0.4 0.13 12.6 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Orf78 PF06024.12 ORF50117 - 0.065 13.5 1.7 0.1 12.9 0.1 2.1 2 1 0 2 2 2 0 Orf78 (ac78) DUF485 PF04341.12 ORF50117 - 0.096 12.6 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF2407_C PF13373.6 ORF50117 - 0.13 12.4 0.4 0.32 11.2 0.0 1.8 1 1 1 2 2 2 0 DUF2407 C-terminal domain Podoplanin PF05808.11 ORF50117 - 1 9.4 11.9 0.022 14.9 3.7 2.2 3 0 0 3 3 3 0 Podoplanin SET PF00856.28 ORF48295 - 1.1e-05 25.9 0.0 2.6e-05 24.7 0.0 1.6 2 0 0 2 2 2 1 SET domain Rhomboid PF01694.22 ORF42663 - 7.1e-13 48.8 9.8 1e-12 48.3 9.8 1.2 1 0 0 1 1 1 1 Rhomboid family DER1 PF04511.15 ORF42663 - 2.5e-11 43.9 12.5 3.5e-11 43.4 12.5 1.2 1 0 0 1 1 1 1 Der1-like family DUF1751 PF08551.10 ORF42663 - 0.00022 21.7 4.7 0.00022 21.7 4.7 1.9 2 0 0 2 2 2 1 Eukaryotic integral membrane protein (DUF1751) Peptidase_M56 PF05569.11 ORF42663 - 0.066 12.4 4.3 0.49 9.5 1.1 2.2 2 0 0 2 2 2 0 BlaR1 peptidase M56 TB2_DP1_HVA22 PF03134.19 ORF42663 - 5.7 7.0 8.6 7.9 6.5 1.5 2.6 1 1 1 2 2 2 0 TB2/DP1, HVA22 family OTCace PF00185.24 ORF4251 - 5.5e-55 185.7 0.1 1.3e-54 184.6 0.1 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 ORF4251 - 7.3e-49 165.6 0.0 1.1e-48 165.0 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Indigoidine_A PF04227.12 ORF35369 - 1.7e-124 414.9 1.8 1.9e-124 414.7 1.8 1.0 1 0 0 1 1 1 1 Indigoidine synthase A like protein DUF2815 PF10991.8 ORF35369 - 0.0019 18.2 0.1 0.0032 17.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2815) MinC_N PF05209.13 ORF35369 - 0.047 13.6 0.4 0.18 11.8 0.0 2.2 3 0 0 3 3 3 0 Septum formation inhibitor MinC, N-terminal domain Ni_hydr_CYTB PF01292.20 ORF35359 - 0.026 14.1 0.7 0.041 13.5 0.6 1.4 1 1 0 1 1 1 0 Prokaryotic cytochrome b561 DUF2370 PF10176.9 ORF35359 - 0.11 12.1 0.4 0.23 11.1 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) L_lactis_ph-MCP PF06673.11 ORF35359 - 0.14 11.2 0.0 0.21 10.6 0.0 1.2 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein DUF996 PF06195.13 ORF35359 - 0.47 10.7 8.7 0.075 13.3 2.0 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF996) DUF4972 PF16342.5 ORF35359 - 0.65 9.7 2.8 1.6 8.4 2.8 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) DHHC PF01529.20 ORF35359 - 6.6 6.8 13.4 1.4 9.0 1.5 2.4 1 1 2 3 3 3 0 DHHC palmitoyltransferase DUF4131 PF13567.6 ORF35023 - 7.3 6.2 7.3 15 5.2 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) WD40 PF00400.32 ORF34815 - 1.6e-55 183.8 29.6 1.1e-10 41.9 0.2 7.1 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF34815 - 6.8e-19 68.0 5.8 0.012 15.9 0.0 5.7 1 1 4 6 6 6 5 Anaphase-promoting complex subunit 4 WD40 domain IKI3 PF04762.12 ORF34815 - 1.1e-06 27.0 8.8 9.4e-06 23.9 4.0 2.3 1 1 1 2 2 2 2 IKI3 family eIF2A PF08662.11 ORF34815 - 3.3e-05 23.8 7.9 0.0011 18.9 0.7 3.4 1 1 2 3 3 3 3 Eukaryotic translation initiation factor eIF2A Coatomer_WDAD PF04053.14 ORF34815 - 0.036 13.1 4.0 1.5 7.7 0.2 3.3 1 1 2 4 4 4 0 Coatomer WD associated region PPV_E2_C PF00511.17 ORF34815 - 0.19 11.9 2.9 1.3 9.3 0.3 2.9 1 1 1 2 2 2 0 E2 (early) protein, C terminal DUF4595 PF15283.6 ORF34815 - 0.21 11.6 1.7 0.71 9.9 0.4 2.4 2 2 1 3 3 3 0 Domain of unknown function (DUF4595) with porin-like fold DUF5629 PF18629.1 ORF34815 - 1.2 9.8 3.7 3.7 8.2 0.0 3.5 3 1 2 5 5 5 0 Family of unknown function (DUF5629) DUF2387 PF09526.10 ORF34815 - 3.1 8.0 6.9 1e+02 3.2 0.0 4.4 4 0 0 4 4 4 0 Probable metal-binding protein (DUF2387) Sulfate_transp PF00916.20 ORF29874 - 9.2e-33 113.5 5.6 1.2e-32 113.1 5.6 1.1 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 ORF29874 - 9.1e-13 47.9 0.0 2e-12 46.8 0.0 1.5 2 0 0 2 2 2 1 STAS domain MFS_MOT1 PF16983.5 ORF29874 - 0.67 10.4 11.5 0.82 10.1 5.2 2.5 1 1 1 2 2 2 0 Molybdate transporter of MFS superfamily RecG_N PF17190.4 ORF2833 - 1.3 9.8 5.4 0.91 10.3 0.1 3.2 2 2 1 3 3 3 0 RecG N-terminal helical domain Na_H_Exchanger PF00999.21 ORF17540 - 2.2e-12 46.5 7.5 2.6e-12 46.3 7.5 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family PLA2_B PF01735.18 ORF17540 - 0.036 12.5 1.7 0.049 12.0 1.7 1.2 1 0 0 1 1 1 0 Lysophospholipase catalytic domain TMIE PF16038.5 ORF17540 - 0.19 11.6 0.4 1.1 9.1 0.1 2.5 2 0 0 2 2 2 0 TMIE protein EnY2 PF10163.9 ORF17540 - 0.35 11.3 2.0 1.2 9.6 0.1 2.5 3 0 0 3 3 3 0 Transcription factor e(y)2 TssN PF17555.2 ORF17540 - 7.6 5.8 6.4 12 5.2 6.4 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssN Porphobil_deam PF01379.20 ORF17485 - 5.1e-82 274.3 0.0 6.6e-82 273.9 0.0 1.2 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 ORF17485 - 1.4e-25 89.5 0.1 2.4e-25 88.7 0.1 1.4 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain DEAD PF00270.29 ORF148767 - 6e-05 22.9 0.0 8.5e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase CMS1 PF14617.6 ORF148767 - 0.032 13.6 0.0 0.047 13.0 0.0 1.2 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit Semialdhyde_dh PF01118.24 ORF144752 - 1.8e-32 112.3 0.0 3.1e-32 111.6 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 ORF144752 - 3.9e-20 72.7 0.0 5.9e-20 72.1 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain DapB_N PF01113.20 ORF144752 - 0.0022 18.1 0.0 0.0043 17.2 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 ORF144752 - 0.013 16.3 0.0 0.032 15.1 0.0 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Epimerase PF01370.21 ORF144752 - 0.019 14.5 0.0 0.029 13.8 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family NmrA PF05368.13 ORF144752 - 0.043 13.4 0.0 0.067 12.7 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family DUF4459 PF14673.6 ORF144752 - 0.16 11.8 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4459) Band_7 PF01145.25 ORF142615 - 1.8e-34 119.3 0.7 2.5e-34 118.8 0.7 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family CCP_MauG PF03150.14 ORF142615 - 0.29 11.8 1.6 1.2 9.8 1.6 2.0 2 1 0 2 2 2 0 Di-haem cytochrome c peroxidase Ssl1 PF04056.14 ORF141229 - 2.4e-56 190.6 0.5 3.1e-56 190.2 0.5 1.1 1 0 0 1 1 1 1 Ssl1-like VWA_2 PF13519.6 ORF141229 - 7.7e-11 42.6 0.0 9e-10 39.2 0.0 2.2 2 0 0 2 2 2 1 von Willebrand factor type A domain Cas_Cas6 PF01881.16 ORF141229 - 0.029 14.9 1.2 0.073 13.6 0.2 1.9 2 0 0 2 2 2 0 CRISPR associated protein Cas6 VWA_3 PF13768.6 ORF141229 - 0.061 13.3 0.0 0.11 12.4 0.0 1.6 1 1 0 1 1 1 0 von Willebrand factor type A domain DUF2996 PF11210.8 ORF141229 - 0.092 13.2 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2996) HECT PF00632.25 ORF141086 - 1.2e-47 162.9 0.0 1.7e-47 162.4 0.0 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) DUF2623 PF11115.8 ORF141086 - 0.012 15.7 0.2 0.028 14.5 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2623) Homeodomain PF00046.29 ORF140916 - 2.4e-05 24.1 3.8 5.5e-05 22.9 3.8 1.6 1 0 0 1 1 1 1 Homeodomain Connexin43 PF03508.13 ORF140916 - 0.0019 17.7 0.8 0.0019 17.7 0.8 2.1 2 0 0 2 2 2 1 Gap junction alpha-1 protein (Cx43) TraF PF13728.6 ORF140916 - 0.3 10.9 6.8 1.5 8.6 2.5 2.3 2 0 0 2 2 2 0 F plasmid transfer operon protein Ank_2 PF12796.7 ORF139011 - 7.1e-55 183.5 7.9 4e-17 62.6 0.0 4.7 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF139011 - 4.1e-40 135.7 6.3 3.8e-10 40.1 0.0 6.4 4 2 4 8 8 8 8 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF139011 - 9.9e-33 111.8 16.1 1.9e-07 31.2 0.1 8.7 1 1 8 9 9 9 9 Ankyrin repeats (many copies) Ank PF00023.30 ORF139011 - 5.5e-31 105.7 22.3 1.2e-05 25.5 0.0 9.1 9 0 0 9 9 9 9 Ankyrin repeat Ank_3 PF13606.6 ORF139011 - 2.1e-30 101.4 10.0 3.1e-05 24.0 0.0 9.3 9 0 0 9 9 9 8 Ankyrin repeat PrsW-protease PF13367.6 ORF135572 - 1.4e-17 63.8 0.1 2.9e-17 62.8 0.1 1.6 1 0 0 1 1 1 1 PrsW family intramembrane metalloprotease DctQ PF04290.12 ORF135572 - 6 6.8 15.0 43 4.0 8.1 3.4 4 0 0 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component Thioredoxin PF00085.20 ORF134706 - 1.9e-21 76.0 0.0 5.1e-21 74.6 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF134706 - 5.7e-05 23.5 0.4 0.00026 21.4 0.0 2.1 2 0 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF134706 - 0.00026 21.1 0.8 0.00044 20.4 0.0 1.8 2 0 0 2 2 1 1 Thioredoxin-like DUF2203 PF09969.9 ORF134706 - 0.011 16.4 3.1 0.027 15.2 3.1 1.6 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) zf-CpG_bind_C PF12269.8 ORF134706 - 0.022 14.6 4.4 0.035 13.9 4.4 1.3 1 0 0 1 1 1 0 CpG binding protein zinc finger C terminal domain OST3_OST6 PF04756.13 ORF134706 - 0.037 13.4 0.0 0.054 12.9 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family HemX PF04375.14 ORF134706 - 0.076 12.3 5.3 0.11 11.8 5.3 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase OmpH PF03938.14 ORF134706 - 0.078 13.3 10.9 0.15 12.4 10.9 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF1160 PF06648.11 ORF134706 - 0.081 12.9 0.4 0.14 12.2 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) V_ATPase_I PF01496.19 ORF134706 - 0.12 10.3 2.6 0.15 10.0 2.6 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RmuC PF02646.16 ORF134706 - 0.12 11.5 7.9 0.017 14.2 4.0 1.5 2 0 0 2 2 2 0 RmuC family Thioredoxin_8 PF13905.6 ORF134706 - 0.15 12.4 0.2 0.48 10.8 0.0 2.0 2 0 0 2 2 2 0 Thioredoxin-like AAA_23 PF13476.6 ORF134706 - 0.16 12.5 8.4 0.25 11.8 8.4 1.3 1 0 0 1 1 1 0 AAA domain Flavodoxin_4 PF12682.7 ORF134706 - 0.19 11.5 0.0 0.44 10.2 0.0 1.6 1 0 0 1 1 1 0 Flavodoxin DUF4355 PF14265.6 ORF134706 - 0.21 11.9 13.0 0.36 11.1 13.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4355) DivIC PF04977.15 ORF134706 - 1.3 8.8 10.2 3.7 7.4 10.2 1.7 1 0 0 1 1 1 0 Septum formation initiator DUF4404 PF14357.6 ORF134706 - 1.4 9.6 8.2 4.7 7.9 7.7 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) Katanin_con80 PF13925.6 ORF134706 - 2.4 8.2 5.9 0.7 9.9 3.1 1.5 2 0 0 2 2 1 0 con80 domain of Katanin DUF4140 PF13600.6 ORF134706 - 2.8 8.4 6.1 5.7 7.4 6.1 1.4 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Atg14 PF10186.9 ORF134706 - 6.8 5.7 8.9 9.7 5.2 8.9 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ECM11 PF15463.6 ORF134706 - 6.8 7.3 11.7 0.67 10.5 6.7 1.8 2 0 0 2 2 2 0 Extracellular mutant protein 11 adh_short PF00106.25 ORF132353 - 1e-23 83.8 0.0 5e-22 78.3 0.0 2.1 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF132353 - 1.9e-13 50.5 0.0 2.8e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF132353 - 2e-08 34.4 0.0 3.5e-08 33.6 0.0 1.5 1 0 0 1 1 1 1 KR domain YjeF_N PF03853.15 ORF132353 - 0.0096 15.8 0.2 0.098 12.5 0.0 2.2 2 0 0 2 2 2 1 YjeF-related protein N-terminus Epimerase PF01370.21 ORF132353 - 0.018 14.5 0.0 0.043 13.3 0.0 1.8 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Pyr_redox_3 PF13738.6 ORF132353 - 0.019 14.3 0.0 0.024 13.9 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sulfotransfer_1 PF00685.27 ORF130623 - 3.3e-16 59.5 0.7 5.1e-16 59.0 0.7 1.2 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF130623 - 3e-05 24.5 0.0 7.4e-05 23.2 0.0 1.6 1 0 0 1 1 1 1 Sulfotransferase family AAA PF00004.29 ORF130389 - 3.2e-17 63.2 0.0 5.1e-17 62.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 ORF130389 - 3.7e-15 56.1 0.0 7.1e-13 48.6 0.0 2.3 1 1 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 ORF130389 - 1.3e-13 51.1 0.0 4.6e-13 49.4 0.0 1.9 2 0 0 2 2 1 1 Replication factor C C-terminal domain Rad17 PF03215.15 ORF130389 - 1.4e-10 41.4 0.0 3.4e-10 40.1 0.0 1.6 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_30 PF13604.6 ORF130389 - 4.1e-07 29.9 0.0 7.9e-07 29.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 ORF130389 - 1.4e-06 28.6 0.2 0.00013 22.3 0.2 2.6 1 1 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF130389 - 3.4e-06 27.0 0.4 9.3e-06 25.6 0.4 1.6 1 1 0 1 1 1 1 AAA domain AAA_7 PF12775.7 ORF130389 - 3.8e-06 26.6 0.1 6e-06 25.9 0.1 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 ORF130389 - 4.6e-06 27.1 0.0 2.3e-05 24.9 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 ORF130389 - 5e-06 26.6 0.1 1.7e-05 24.8 0.0 1.9 2 0 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 ORF130389 - 9.8e-06 25.6 0.0 1.7e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 ORF130389 - 4.3e-05 22.8 0.0 8.5e-05 21.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_3 PF07726.11 ORF130389 - 5e-05 23.2 0.0 9.6e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 ORF130389 - 0.00011 22.0 0.0 0.00019 21.2 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 ORF130389 - 0.0002 21.7 0.4 0.0012 19.2 0.4 2.0 1 1 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 ORF130389 - 0.00048 20.4 0.0 0.0016 18.8 0.0 1.9 2 0 0 2 2 1 1 AAA C-terminal domain DNA_pol3_delta PF06144.13 ORF130389 - 0.00049 19.9 0.1 0.00077 19.3 0.1 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit PhoH PF02562.16 ORF130389 - 0.00068 19.1 0.1 0.83 9.1 0.0 2.3 2 0 0 2 2 2 2 PhoH-like protein ResIII PF04851.15 ORF130389 - 0.0015 18.5 0.2 0.009 16.0 0.1 1.9 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit Viral_helicase1 PF01443.18 ORF130389 - 0.0019 18.0 0.0 0.0029 17.4 0.0 1.3 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase DEAD PF00270.29 ORF130389 - 0.0031 17.3 0.7 0.14 11.9 0.0 2.5 1 1 1 2 2 2 1 DEAD/DEAH box helicase TniB PF05621.11 ORF130389 - 0.0035 16.8 1.0 0.076 12.4 0.3 2.6 1 1 1 2 2 2 1 Bacterial TniB protein TIP49 PF06068.13 ORF130389 - 0.0063 15.8 0.2 0.013 14.7 0.2 1.6 1 1 0 1 1 1 1 TIP49 P-loop domain RNA_helicase PF00910.22 ORF130389 - 0.0082 16.5 0.1 0.021 15.2 0.1 1.7 1 1 0 1 1 1 1 RNA helicase SRP54 PF00448.22 ORF130389 - 0.0087 15.7 0.0 0.022 14.4 0.0 1.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_28 PF13521.6 ORF130389 - 0.009 16.3 0.0 0.017 15.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF130389 - 0.0094 16.5 0.1 0.12 12.9 0.0 2.0 1 1 1 2 2 2 1 ABC transporter FtsK_SpoIIIE PF01580.18 ORF130389 - 0.0097 15.3 0.0 0.017 14.5 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_24 PF13479.6 ORF130389 - 0.01 15.6 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 ORF130389 - 0.014 15.1 0.1 0.16 11.7 0.1 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain T2SSE PF00437.20 ORF130389 - 0.026 13.6 0.0 0.043 12.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Mg_chelatase PF01078.21 ORF130389 - 0.027 13.9 0.1 0.095 12.1 0.0 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Torsin PF06309.11 ORF130389 - 0.036 14.2 0.0 0.092 12.8 0.0 1.7 2 0 0 2 2 1 0 Torsin NACHT PF05729.12 ORF130389 - 0.036 14.0 0.1 0.75 9.7 0.1 2.3 1 1 0 1 1 1 0 NACHT domain AAA_8 PF12780.7 ORF130389 - 0.048 13.0 0.1 0.074 12.4 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 MCM PF00493.23 ORF130389 - 0.05 12.7 0.0 0.08 12.0 0.0 1.3 1 0 0 1 1 1 0 MCM P-loop domain AAA_6 PF12774.7 ORF130389 - 0.051 12.5 0.0 0.089 11.7 0.0 1.4 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region DUF2075 PF09848.9 ORF130389 - 0.077 12.2 0.0 0.17 11.1 0.0 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TsaE PF02367.17 ORF130389 - 0.082 12.9 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 ORF130389 - 0.093 12.5 0.1 0.18 11.5 0.1 1.5 1 1 0 1 1 1 0 IstB-like ATP binding protein AAA_18 PF13238.6 ORF130389 - 0.097 13.2 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_2 PF07724.14 ORF130389 - 0.13 12.3 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Hydin_ADK PF17213.3 ORF130389 - 0.15 12.3 0.1 0.24 11.7 0.1 1.3 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 ORF130389 - 0.17 12.0 0.2 0.33 11.1 0.2 1.6 1 1 0 1 1 1 0 AAA domain PCI PF01399.27 ORF128383 - 1.6e-15 57.5 0.2 3.7e-15 56.3 0.2 1.6 1 0 0 1 1 1 1 PCI domain UBA PF00627.31 ORF127419 - 3e-06 27.0 0.4 3e-06 27.0 0.4 1.8 2 0 0 2 2 2 1 UBA/TS-N domain Metallophos PF00149.28 ORF127419 - 3.9e-05 24.3 0.0 6e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Thioredoxin_7 PF13899.6 ORF127419 - 0.0096 16.1 0.0 0.017 15.3 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like DUF4047 PF13256.6 ORF125067 - 2.2 8.5 5.4 7.4 6.8 4.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) N-glycanase_C PF09113.10 ORF124422 - 0.17 11.7 1.6 0.33 10.7 1.6 1.4 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal Sugar_tr PF00083.24 ORF12158 - 1.3e-09 37.4 17.4 1.5e-08 33.9 17.4 2.5 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF12158 - 4.7e-07 29.1 9.0 4.7e-07 29.1 9.0 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily S_4TM PF18159.1 ORF12158 - 0.73 9.1 0.0 0.73 9.1 0.0 2.5 3 0 0 3 3 3 0 SMODS-associating 4TM effector domain EamA PF00892.20 ORF121296 - 3.1e-11 43.6 22.0 4.6e-07 30.1 5.0 2.2 2 0 0 2 2 2 2 EamA-like transporter family Nuc_sug_transp PF04142.15 ORF121296 - 1.1 8.3 4.7 8.3 5.5 4.7 2.0 1 1 0 1 1 1 0 Nucleotide-sugar transporter DUF2442 PF10387.9 ORF117950 - 0.044 14.1 0.0 0.094 13.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2442) NOA36 PF06524.12 ORF117950 - 9 5.5 9.7 14 4.9 9.7 1.2 1 0 0 1 1 1 0 NOA36 protein PepSY_2 PF13670.6 ORF115088 - 0.4 10.7 4.9 0.57 10.2 0.9 2.4 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain EIF_2_alpha PF07541.12 NODE_19376_length_1002_cov_2.339193_g14812_i0reverse_frame_3 - 0.066 13.3 4.1 0.14 12.2 4.1 1.7 1 1 0 1 1 1 0 Eukaryotic translation initiation factor 2 alpha subunit EF-hand_6 PF13405.6 NODE_19376_length_1002_cov_2.339193_g14812_i0reverse_frame_3 - 0.076 13.0 0.3 2.9 8.1 0.0 3.1 2 0 0 2 2 2 0 EF-hand domain SAM_Exu PF18609.1 NODE_19376_length_1002_cov_2.339193_g14812_i0reverse_frame_3 - 0.077 13.1 0.3 0.38 10.9 0.0 2.3 2 0 0 2 2 2 0 Exuperantia SAM-like domain MFS_1 PF07690.16 ORF98640 - 1.4e-06 27.5 12.5 1.4e-06 27.5 12.5 1.5 1 1 1 2 2 2 2 Major Facilitator Superfamily TctC PF03401.14 ORF9590 - 0.027 13.5 0.1 0.044 12.8 0.1 1.2 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter family receptor DUF1319 PF07028.11 ORF9590 - 0.046 13.9 1.2 0.15 12.3 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1319) SKA2 PF16740.5 ORF9590 - 0.062 13.1 3.3 0.17 11.7 3.3 1.6 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 SHE3 PF17078.5 ORF9590 - 0.065 12.9 0.3 0.065 12.9 0.3 1.5 2 0 0 2 2 2 0 SWI5-dependent HO expression protein 3 Prefoldin PF02996.17 ORF9590 - 0.071 13.0 3.4 0.15 12.0 3.4 1.5 1 0 0 1 1 1 0 Prefoldin subunit DUF1465 PF07323.12 ORF9590 - 0.088 12.6 3.1 0.11 12.4 1.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1465) DUF5320 PF17253.2 ORF9590 - 0.14 13.3 0.2 1.4 10.0 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5320) HALZ PF02183.18 ORF9590 - 0.7 10.2 2.5 1 9.6 1.5 1.8 2 0 0 2 2 2 0 Homeobox associated leucine zipper UPF0242 PF06785.11 ORF9590 - 1 9.4 7.1 0.25 11.4 3.7 1.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus YabA PF06156.13 ORF9590 - 4.1 8.1 5.0 6.2 7.5 3.1 2.1 1 1 1 2 2 2 0 Initiation control protein YabA Vasohibin PF14822.6 ORF7107 - 0.015 14.5 0.5 0.028 13.7 0.5 1.4 1 0 0 1 1 1 0 Vasohibin ALMT PF11744.8 ORF7107 - 4.5 6.0 7.2 0.39 9.5 2.6 1.5 2 0 0 2 2 2 0 Aluminium activated malate transporter DUF3385 PF11865.8 ORF6815 - 0.27 11.1 1.0 18 5.2 0.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF3385) Mito_carr PF00153.27 ORF67572 - 2.9e-56 187.4 1.2 1.1e-20 73.4 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein Form_Nir_trans PF01226.17 ORF67572 - 0.028 13.8 0.5 0.061 12.7 0.5 1.6 1 1 0 1 1 1 0 Formate/nitrite transporter DUF3385 PF11865.8 ORF66923 - 0.27 11.1 1.0 18 5.2 0.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF3385) RCC1_2 PF13540.6 ORF66205 - 1.7e-11 43.6 18.7 0.038 13.8 1.0 6.9 7 0 0 7 7 7 5 Regulator of chromosome condensation (RCC1) repeat Phage_P2_GpU PF06995.11 ORF66205 - 0.0038 16.8 0.3 8.2 6.1 0.0 4.5 5 1 0 5 5 5 1 Phage P2 GpU FtsQ PF03799.15 ORF66205 - 0.017 15.9 0.1 38 5.1 0.0 4.3 1 1 4 5 5 5 0 Cell division protein FtsQ DUF155 PF02582.14 ORF66205 - 0.13 12.4 6.8 15 5.6 0.1 5.3 4 2 1 5 5 5 0 Uncharacterised ACR, YagE family COG1723 NAD_binding_10 PF13460.6 ORF65652 - 1.3e-23 83.9 0.0 2e-23 83.2 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding 3Beta_HSD PF01073.19 ORF65652 - 8.6e-09 34.8 0.0 1.2e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NmrA PF05368.13 ORF65652 - 1.8e-07 31.0 0.0 1.9e-06 27.6 0.0 2.4 1 1 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 ORF65652 - 5.7e-05 22.7 0.1 0.00021 20.8 0.1 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 ORF65652 - 0.0064 15.7 0.0 0.012 14.7 0.0 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF65652 - 0.029 13.5 0.2 2.5 7.2 0.0 2.3 1 1 0 2 2 2 0 Male sterility protein Ribosomal_S5 PF00333.20 ORF61722 - 2.9e-24 84.8 2.1 5.7e-24 83.9 2.1 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 ORF61722 - 1.1e-22 79.3 0.0 1.7e-22 78.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain dUTPase PF00692.19 ORF61722 - 0.13 11.9 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 dUTPase Vasohibin PF14822.6 ORF56238 - 0.016 14.4 0.5 0.028 13.7 0.5 1.3 1 0 0 1 1 1 0 Vasohibin ALMT PF11744.8 ORF56238 - 0.2 10.5 2.3 0.32 9.8 2.3 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter PAN_3 PF08277.12 ORF54265 - 0.016 15.0 2.7 0.049 13.4 2.7 1.8 1 0 0 1 1 1 0 PAN-like domain Vasohibin PF14822.6 ORF51650 - 0.015 14.5 0.5 0.028 13.7 0.5 1.4 1 0 0 1 1 1 0 Vasohibin ALMT PF11744.8 ORF51650 - 4.5 6.0 7.2 0.39 9.5 2.6 1.5 2 0 0 2 2 2 0 Aluminium activated malate transporter MMS19_N PF14500.6 ORF51612 - 0.019 14.5 0.4 0.036 13.6 0.4 1.4 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Xpo1 PF08389.12 ORF51612 - 0.068 13.2 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Exportin 1-like protein DUF4441 PF14536.6 ORF51612 - 1.5 9.0 16.1 4.6 7.5 3.7 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4441) DUF4460 PF14687.6 ORF51612 - 8 6.6 8.8 0.63 10.1 1.4 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4460) Asp PF00026.23 ORF51049 - 7.4e-24 84.7 3.9 9.6e-24 84.4 3.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF51049 - 1.7e-06 28.4 0.5 4.6e-06 27.0 0.2 1.8 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal zf-RING_2 PF13639.6 ORF42067 - 1.6e-12 47.5 5.8 1.6e-12 47.5 5.8 1.8 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF42067 - 4e-08 33.4 7.5 9e-08 32.3 7.5 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF42067 - 5.4e-08 32.6 3.4 1.1e-07 31.6 3.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF42067 - 3.3e-07 29.9 5.1 9.2e-07 28.5 5.1 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF42067 - 4.3e-07 29.7 5.8 1.1e-06 28.4 5.8 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF42067 - 3.9e-06 26.6 4.2 8.7e-06 25.5 4.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF42067 - 6.4e-06 26.1 1.2 1.6e-05 24.8 1.2 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF42067 - 1.1e-05 25.4 1.8 1.9e-05 24.6 1.8 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF42067 - 1.3e-05 25.3 7.6 9.5e-05 22.5 7.6 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain zf-RING_5 PF14634.6 ORF42067 - 9.6e-05 22.3 5.2 0.00022 21.1 5.2 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF42067 - 0.00028 20.7 3.5 0.00065 19.5 3.5 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Endomucin PF07010.12 ORF42067 - 0.00028 20.9 3.5 0.00046 20.2 3.5 1.2 1 0 0 1 1 1 1 Endomucin Zn_ribbon_17 PF17120.5 ORF42067 - 0.00035 20.1 3.5 0.0018 17.8 4.2 1.8 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF42067 - 0.00099 19.2 6.6 0.0019 18.3 6.6 1.5 1 0 0 1 1 1 1 RING-variant domain Shisa PF13908.6 ORF42067 - 0.0017 18.6 0.3 0.0017 18.6 0.3 1.8 2 0 0 2 2 1 1 Wnt and FGF inhibitory regulator zf-RING-like PF08746.11 ORF42067 - 0.0018 18.5 5.5 0.0037 17.5 5.5 1.6 1 0 0 1 1 1 1 RING-like domain LRRC37AB_C PF14914.6 ORF42067 - 0.0019 18.1 1.0 0.0019 18.1 1.0 2.1 1 1 1 2 2 2 1 LRRC37A/B like protein 1 C-terminal domain zf-Nse PF11789.8 ORF42067 - 0.0026 17.5 4.1 0.0063 16.3 4.1 1.7 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Antimicrobial10 PF08105.11 ORF42067 - 0.0028 17.7 0.1 0.0087 16.1 0.0 1.8 2 0 0 2 2 1 1 Metchnikowin family PHD PF00628.29 ORF42067 - 0.031 14.2 5.6 0.073 13.0 5.6 1.7 1 0 0 1 1 1 0 PHD-finger Peptidase_M56 PF05569.11 ORF42067 - 0.032 13.4 0.0 0.053 12.7 0.0 1.3 1 0 0 1 1 1 0 BlaR1 peptidase M56 Baculo_RING PF05883.11 ORF42067 - 0.085 12.9 4.6 0.15 12.1 4.6 1.4 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Prok-RING_1 PF14446.6 ORF42067 - 0.096 12.6 0.6 0.096 12.6 0.6 2.8 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zf-C3HC4_4 PF15227.6 ORF42067 - 0.11 12.6 4.6 0.59 10.3 4.6 2.2 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING DUF2207 PF09972.9 ORF42067 - 0.13 11.0 0.6 0.29 9.8 0.0 1.3 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) CYYR1 PF10873.8 ORF42067 - 0.14 12.6 0.1 0.24 11.8 0.1 1.4 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 RIFIN PF02009.16 ORF42067 - 0.25 11.2 3.5 0.36 10.7 3.5 1.2 1 0 0 1 1 1 0 Rifin DUF4064 PF13273.6 ORF42067 - 0.45 10.8 6.0 0.85 9.9 6.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) TMEM154 PF15102.6 ORF42067 - 0.79 9.6 12.6 0.27 11.2 8.7 2.3 2 1 0 2 2 1 0 TMEM154 protein family DUF1673 PF07895.11 ORF42067 - 1.5 8.5 7.3 0.19 11.4 2.9 1.8 2 1 0 2 2 1 0 Protein of unknown function (DUF1673) ABC2_membrane_3 PF12698.7 ORF42067 - 5.6 6.0 12.0 8.9 5.3 12.0 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein BTB PF00651.31 ORF3729 - 2.1e-10 40.8 0.1 4.8e-10 39.7 0.1 1.6 2 0 0 2 2 2 1 BTB/POZ domain Rhomboid PF01694.22 ORF36757 - 3.6e-07 30.3 13.6 6.7e-07 29.4 13.6 1.5 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 ORF36757 - 0.0079 16.7 10.1 0.0079 16.7 10.1 2.7 1 1 2 3 3 3 1 Eukaryotic integral membrane protein (DUF1751) TctA PF01970.16 ORF36757 - 3 6.5 15.5 2.9 6.5 4.7 2.3 1 1 1 2 2 2 0 Tripartite tricarboxylate transporter TctA family DUF3385 PF11865.8 ORF35711 - 0.27 11.1 1.0 18 5.2 0.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF3385) Beta_elim_lyase PF01212.21 ORF33897 - 3.1e-96 322.1 0.3 4.2e-96 321.7 0.1 1.3 2 0 0 2 2 2 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 ORF33897 - 1.2e-08 34.6 0.0 2e-08 33.8 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 ORF33897 - 0.00028 19.5 0.0 0.00057 18.5 0.0 1.5 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 ORF33897 - 0.022 14.1 0.4 0.3 10.3 0.0 2.1 2 0 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family CheD PF03975.13 ORF33897 - 0.11 12.6 0.3 0.3 11.2 0.2 1.8 1 1 0 1 1 1 0 CheD chemotactic sensory transduction MMS19_N PF14500.6 ORF33760 - 0.019 14.5 0.4 0.036 13.6 0.4 1.4 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Xpo1 PF08389.12 ORF33760 - 0.068 13.2 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Exportin 1-like protein DUF4441 PF14536.6 ORF33760 - 1.5 9.0 16.1 4.6 7.5 3.7 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4441) DUF4460 PF14687.6 ORF33760 - 8 6.6 8.8 0.63 10.1 1.4 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4460) DUF4446 PF14584.6 ORF32355 - 0.042 13.8 0.7 0.042 13.8 0.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) ALMT PF11744.8 ORF32355 - 2.3 7.0 5.8 0.39 9.5 1.6 1.7 2 0 0 2 2 2 0 Aluminium activated malate transporter DnaJ PF00226.31 ORF20680 - 4.4e-14 52.3 0.0 1.2e-13 51.0 0.0 1.8 1 1 0 1 1 1 1 DnaJ domain FAD_binding_1 PF00667.20 ORF20047 - 1.5e-16 60.7 0.0 2.3e-16 60.0 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain NAD_binding_1 PF00175.21 ORF20047 - 2.7e-15 56.9 0.0 4.8e-15 56.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain Ubiquitin_2 PF14560.6 ORF16454 - 8e-08 32.6 0.1 2.2e-07 31.2 0.1 1.8 1 0 0 1 1 1 1 Ubiquitin-like domain LRR_9 PF14580.6 ORF16454 - 1.2e-07 31.4 0.7 1.8e-07 30.8 0.2 1.6 2 0 0 2 2 2 1 Leucine-rich repeat LRR_4 PF12799.7 ORF16454 - 6.4e-07 29.6 8.2 0.00071 19.9 1.2 3.5 3 1 1 4 4 4 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF16454 - 1.9e-05 24.4 4.7 0.0026 17.5 0.6 3.8 1 1 2 3 3 3 3 Leucine rich repeat Acid_PPase PF12689.7 ORF152778 - 0.0051 16.7 0.0 0.021 14.7 0.0 1.8 2 0 0 2 2 2 1 Acid Phosphatase TMF_TATA_bd PF12325.8 ORF152568 - 0.0021 18.3 1.7 0.0021 18.3 1.7 2.6 3 1 0 3 3 3 1 TATA element modulatory factor 1 TATA binding DUF763 PF05559.11 ORF152568 - 0.049 12.8 1.7 0.092 11.9 1.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF763) CLZ PF16526.5 ORF152568 - 0.059 13.7 6.6 1.3 9.4 0.6 3.7 2 2 2 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4509 PF14970.6 ORF152568 - 0.079 12.9 5.2 0.094 12.6 4.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4509) zf-BED PF02892.15 ORF152568 - 0.095 12.7 0.1 0.27 11.3 0.1 1.8 1 0 0 1 1 1 0 BED zinc finger CENP-B_N PF04218.13 ORF152568 - 0.095 12.4 3.7 0.77 9.4 0.1 3.6 4 0 0 4 4 4 0 CENP-B N-terminal DNA-binding domain Tape_meas_lam_C PF09718.10 ORF152568 - 0.14 12.3 0.0 0.53 10.5 0.0 2.0 1 0 0 1 1 1 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) FlaC_arch PF05377.11 ORF152568 - 0.29 11.6 10.2 1.4 9.4 0.0 4.2 3 1 1 4 4 3 0 Flagella accessory protein C (FlaC) Prominin PF05478.11 ORF152568 - 0.4 8.6 12.6 0.54 8.1 12.6 1.1 1 0 0 1 1 1 0 Prominin MCPsignal PF00015.21 ORF152568 - 0.76 9.6 6.3 1.8 8.3 4.2 2.2 2 0 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Snapin_Pallidin PF14712.6 ORF152568 - 0.85 10.1 11.2 13 6.3 0.1 3.7 3 1 1 4 4 4 0 Snapin/Pallidin Occludin_ELL PF07303.13 ORF152568 - 1.5 9.6 8.1 3.9 8.2 4.6 3.1 2 1 1 3 3 3 0 Occludin homology domain FlxA PF14282.6 ORF152568 - 1.7 8.7 18.7 1 9.4 13.6 2.9 1 1 1 2 2 2 0 FlxA-like protein Syntaxin PF00804.25 ORF152568 - 2 8.0 15.8 0.49 10.0 6.8 2.9 1 1 2 3 3 3 0 Syntaxin BLOC1_2 PF10046.9 ORF152568 - 3.2 8.1 15.1 0.33 11.3 1.4 3.7 2 1 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DivIC PF04977.15 ORF152568 - 7.4 6.4 14.2 3.1 7.6 0.8 3.4 2 2 1 3 3 3 0 Septum formation initiator DUF4795 PF16043.5 ORF152568 - 8.6 5.9 17.0 34 3.9 17.0 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) DUF3347 PF11827.8 ORF152568 - 9.9 6.3 12.8 0.69 10.1 4.5 2.7 2 1 0 3 3 3 0 Protein of unknown function (DUF3347) MMS19_N PF14500.6 ORF151438 - 0.019 14.5 0.4 0.036 13.6 0.4 1.4 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Xpo1 PF08389.12 ORF151438 - 0.068 13.2 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Exportin 1-like protein DUF4441 PF14536.6 ORF151438 - 1.5 9.0 16.1 4.6 7.5 3.7 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4441) DUF4460 PF14687.6 ORF151438 - 8 6.6 8.8 0.63 10.1 1.4 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4460) DUF4446 PF14584.6 ORF147828 - 0.047 13.7 0.8 0.047 13.7 0.8 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4446) CRR7 PF12095.8 ORF147828 - 0.22 12.0 1.5 0.61 10.6 0.4 2.3 2 1 0 2 2 2 0 Protein CHLORORESPIRATORY REDUCTION 7 ALMT PF11744.8 ORF147828 - 0.36 9.6 3.9 0.18 10.6 0.9 1.8 2 0 0 2 2 2 0 Aluminium activated malate transporter DivIC PF04977.15 ORF143057 - 0.05 13.4 0.1 0.093 12.5 0.1 1.4 1 0 0 1 1 1 0 Septum formation initiator DHHC PF01529.20 ORF143000 - 9.4e-21 74.3 9.5 9.4e-21 74.3 9.5 2.3 2 0 0 2 2 2 2 DHHC palmitoyltransferase IGFBP PF00219.18 ORF143000 - 0.23 12.1 5.2 0.45 11.2 5.2 1.4 1 0 0 1 1 1 0 Insulin-like growth factor binding protein DUF1281_C PF18406.1 ORF142359 - 0.075 12.7 0.0 0.2 11.4 0.0 1.7 2 0 0 2 2 2 0 Ferredoxin-like domain in Api92-like protein MMS19_N PF14500.6 ORF141251 - 0.019 14.5 0.4 0.036 13.6 0.4 1.4 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II Xpo1 PF08389.12 ORF141251 - 0.068 13.2 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Exportin 1-like protein DUF4441 PF14536.6 ORF141251 - 1.5 9.0 16.1 4.6 7.5 3.7 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4441) DUF4460 PF14687.6 ORF141251 - 8 6.6 8.8 0.63 10.1 1.4 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4460) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks51.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks51.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks51.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks51.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:24:51 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PsiE PF06146.12 ORF136980 - 8.8e-16 58.0 5.5 2.1e-15 56.8 5.5 1.7 1 0 0 1 1 1 1 Phosphate-starvation-inducible E DnaJ PF00226.31 ORF118500 - 4.8e-14 52.2 0.0 1.2e-13 51.0 0.0 1.7 1 1 0 1 1 1 1 DnaJ domain Glyco_hydro_92 PF07971.12 ORF114096 - 9.8e-43 146.7 0.0 1.2e-42 146.4 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 92 V-set_2 PF15910.5 ORF112950 - 0.043 13.9 0.7 0.085 13.0 0.7 1.4 1 0 0 1 1 1 0 ICOS V-set domain WD40 PF00400.32 ORF112171 - 0.00014 22.6 5.6 0.062 14.2 0.1 4.8 5 1 0 5 5 5 2 WD domain, G-beta repeat GP3 PF03076.14 ORF102130 - 0.09 12.8 3.5 0.15 12.1 3.5 1.3 1 0 0 1 1 1 0 Equine arteritis virus GP3 Ank_2 PF12796.7 ORF100110 - 2e-09 37.9 0.1 4.2e-09 36.9 0.1 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF100110 - 4.6e-09 36.4 0.5 0.00014 22.1 0.0 2.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF100110 - 7.4e-09 35.7 0.1 0.00028 21.2 0.1 2.5 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF100110 - 3.9e-07 30.5 0.2 1.8e-06 28.4 0.2 2.1 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF100110 - 2e-06 27.7 0.2 0.082 13.5 0.1 2.8 2 0 0 2 2 2 2 Ankyrin repeat Holin_BhlA PF10960.8 NODE_19614_length_994_cov_92.521376_g15010_i0reverse_frame_1 - 0.043 13.8 0.3 0.043 13.8 0.3 2.4 3 0 0 3 3 3 0 BhlA holin family DUF411 PF04214.13 NODE_19548_length_996_cov_295.150884_g14956_i0forward_frame_1 - 2.5 8.1 9.4 8 6.5 0.2 3.7 4 0 0 4 4 4 0 Protein of unknown function, DUF Umbravirus_LDM PF04817.12 NODE_19533_length_997_cov_4.228690_g14943_i0forward_frame_3 - 0.12 11.7 1.6 0.25 10.7 1.6 1.5 1 0 0 1 1 1 0 Umbravirus long distance movement (LDM) family DUF4320 PF14208.6 NODE_19489_length_998_cov_168.558671_g14907_i0reverse_frame_2 - 0.084 13.0 2.0 3.8 7.6 0.2 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4320) Cytomega_UL20A PF05984.12 NODE_19489_length_998_cov_168.558671_g14907_i0reverse_frame_2 - 0.39 11.1 2.6 0.29 11.5 0.3 2.0 2 0 0 2 2 2 0 Cytomegalovirus UL20A protein DnaJ PF00226.31 ORF9345 - 3.5e-22 78.3 0.3 7.4e-22 77.2 0.3 1.6 1 0 0 1 1 1 1 DnaJ domain Cyclin_C PF02984.19 ORF93332 - 0.054 13.6 0.7 0.18 11.9 0.7 1.9 1 0 0 1 1 1 0 Cyclin, C-terminal domain DAGAT PF03982.13 ORF91143 - 1.1e-40 139.5 0.0 1.4e-40 139.1 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol acyltransferase Ca_bind_SSO6904 PF18249.1 ORF88865 - 0.075 13.4 2.1 0.092 13.1 0.5 1.9 2 0 0 2 2 2 0 Calcium binding protein SSO6904 zf-RING_2 PF13639.6 ORF87424 - 7.2e-06 26.2 8.1 4.2e-05 23.8 8.1 2.2 1 1 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF87424 - 7.7e-06 25.8 3.2 1.5e-05 24.9 3.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger EF-hand_6 PF13405.6 ORF87424 - 2.1e-05 24.1 0.0 0.28 11.2 0.0 2.9 2 0 0 2 2 2 2 EF-hand domain zf-C3HC4_3 PF13920.6 ORF87424 - 5.3e-05 23.0 3.8 0.0015 18.3 2.1 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF87424 - 6.1e-05 22.8 2.8 0.00013 21.8 2.8 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) EF-hand_7 PF13499.6 ORF87424 - 0.00065 20.1 0.1 0.16 12.5 0.1 2.6 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF87424 - 0.0023 17.4 0.0 1.6 8.5 0.0 2.9 2 0 0 2 2 2 1 EF hand zf-RING_5 PF14634.6 ORF87424 - 0.0078 16.2 10.5 0.025 14.5 10.6 1.8 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF87424 - 0.011 15.9 11.1 0.016 15.3 6.3 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING HscB_4_cys PF18256.1 ORF87424 - 0.017 15.0 0.1 0.017 15.0 0.1 2.6 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif EF-hand_5 PF13202.6 ORF87424 - 0.023 14.2 0.3 0.055 13.0 0.0 1.8 2 0 0 2 2 2 0 EF hand zf-C3HC4_2 PF13923.6 ORF87424 - 0.034 14.0 9.6 1.6 8.6 6.9 2.7 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF87424 - 0.038 13.9 5.5 0.52 10.2 2.7 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Terminase_GpA PF05876.12 ORF87424 - 0.075 11.6 0.6 0.11 11.1 0.6 1.1 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) zf-MIZ PF02891.20 ORF87424 - 0.16 11.7 10.0 0.15 11.8 6.3 2.2 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger HypA PF01155.19 ORF87424 - 0.2 11.7 1.6 0.44 10.6 1.6 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RING_4 PF14570.6 ORF87424 - 0.2 11.5 4.2 0.63 9.9 1.6 2.3 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RING_11 PF17123.5 ORF87424 - 0.23 11.2 5.2 6.8 6.5 0.0 2.5 2 0 0 2 2 2 0 RING-like zinc finger CEBP_ZZ PF16366.5 ORF87424 - 0.43 10.8 5.5 8.4 6.7 1.1 2.6 1 1 1 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain PHD PF00628.29 ORF87424 - 2.3 8.2 7.2 0.57 10.1 3.9 1.8 2 0 0 2 2 1 0 PHD-finger DZR PF12773.7 ORF87424 - 6.5 6.9 8.7 39 4.4 8.8 2.1 1 1 1 2 2 2 0 Double zinc ribbon zf-rbx1 PF12678.7 ORF87424 - 8.5 6.8 8.4 20 5.5 8.0 1.9 1 1 1 2 2 2 0 RING-H2 zinc finger domain OTU PF02338.19 ORF7499 - 8.6e-11 42.4 0.5 2e-10 41.3 0.1 1.9 2 0 0 2 2 2 1 OTU-like cysteine protease Nore1-SARAH PF16517.5 ORF7499 - 0.058 13.3 1.1 0.14 12.0 1.1 1.7 1 0 0 1 1 1 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Atg14 PF10186.9 ORF68490 - 0.051 12.7 5.8 0.073 12.1 5.8 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Phage_TAC_9 PF10876.8 ORF68490 - 0.086 12.9 0.0 0.21 11.7 0.0 1.7 1 0 0 1 1 1 0 Phage tail assemb.y chaperone protein, TAC Peptidase_C54 PF03416.19 ORF6662 - 0.066 12.6 3.7 0.4 10.1 0.2 2.2 1 1 0 2 2 2 0 Peptidase family C54 DUF268 PF03269.14 ORF6662 - 0.11 12.4 0.3 0.21 11.4 0.3 1.5 1 0 0 1 1 1 0 Caenorhabditis protein of unknown function, DUF268 Leuk-A4-hydro_C PF09127.11 ORF6662 - 0.13 12.3 1.1 0.34 11.0 0.3 2.0 2 0 0 2 2 2 0 Leukotriene A4 hydrolase, C-terminal PKcGMP_CC PF16808.5 ORF6467 - 0.00034 20.4 2.4 0.11 12.4 0.0 3.1 2 1 1 3 3 3 3 Coiled-coil N-terminus of cGMP-dependent protein kinase DivIC PF04977.15 ORF6467 - 0.0067 16.2 1.5 0.0067 16.2 1.5 3.0 2 1 1 3 3 3 1 Septum formation initiator YabA PF06156.13 ORF6467 - 0.03 14.9 4.0 0.13 12.9 4.0 2.2 1 0 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 ORF6467 - 0.067 13.8 2.4 0.22 12.2 2.4 2.0 1 0 0 1 1 1 0 SlyX ABC_tran_CTD PF16326.5 ORF6467 - 0.15 12.4 2.7 0.35 11.1 1.8 2.1 2 0 0 2 2 2 0 ABC transporter C-terminal domain Med4 PF10018.9 ORF6467 - 0.3 10.7 5.9 0.66 9.6 5.9 1.6 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 CEP209_CC5 PF16574.5 ORF6467 - 0.3 11.2 7.1 0.079 13.1 1.8 2.6 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 DUF4795 PF16043.5 ORF6467 - 0.35 10.4 14.7 0.35 10.4 13.2 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) HIP1_clath_bdg PF16515.5 ORF6467 - 1.8 9.2 6.8 5.6 7.6 3.4 2.7 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Fez1 PF06818.15 ORF6467 - 6 7.3 12.0 14 6.1 11.9 1.9 1 1 0 1 1 1 0 Fez1 FAM76 PF16046.5 ORF6467 - 7.9 5.7 12.9 1 8.7 7.4 2.2 1 1 1 2 2 2 0 FAM76 protein DUF2524 PF10732.9 ORF6467 - 9.1 6.7 8.1 17 5.8 0.1 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF2524) IQ PF00612.27 ORF61991 - 0.15 11.9 17.9 0.85 9.6 3.7 3.0 3 0 0 3 3 3 0 IQ calmodulin-binding motif DUF2072 PF09845.9 ORF61991 - 0.17 12.1 3.0 0.62 10.3 3.0 1.9 1 0 0 1 1 1 0 Zn-ribbon containing protein Actin PF00022.19 ORF40423 - 6.5e-116 387.3 0.0 2.3e-115 385.5 0.0 1.7 1 1 0 1 1 1 1 Actin Fib_alpha PF08702.10 ORF39380 - 0.0054 16.9 30.3 0.0065 16.7 8.9 3.0 1 1 2 3 3 3 2 Fibrinogen alpha/beta chain family DUF4407 PF14362.6 ORF39380 - 0.026 13.9 4.4 0.28 10.5 0.7 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) PGAP1 PF07819.13 ORF39380 - 0.028 14.1 1.0 0.072 12.8 1.0 1.7 1 0 0 1 1 1 0 PGAP1-like protein SAS-6_N PF16531.5 ORF39380 - 0.24 12.0 5.5 4.2 8.0 5.5 2.8 1 1 0 1 1 1 0 Centriolar protein SAS N-terminal DUF16 PF01519.16 ORF39380 - 0.51 10.8 24.1 1.3 9.5 7.2 3.7 1 1 2 3 3 3 0 Protein of unknown function DUF16 SlyX PF04102.12 ORF39380 - 1.1 10.0 4.0 2.3 8.9 0.5 3.1 3 0 0 3 3 3 0 SlyX MORN PF02493.20 ORF38749 - 4.3e-49 161.5 69.8 2.1e-09 36.7 1.1 10.6 11 0 0 11 11 11 9 MORN repeat MVL PF12151.8 ORF38749 - 1.6 8.7 6.2 4.6 7.2 0.1 3.8 4 0 0 4 4 4 0 Mannan-binding protein Tudor_2 PF18104.1 ORF38749 - 2.9 7.7 15.7 26 4.6 0.1 5.9 6 0 0 6 6 6 0 Jumonji domain-containing protein 2A Tudor domain Acyltransf_C PF16076.5 ORF37493 - 0.068 13.3 1.7 0.12 12.5 0.1 2.2 2 0 0 2 2 2 0 Acyltransferase C-terminus NDK PF00334.19 ORF36276 - 3.3e-07 30.4 0.0 0.0023 18.0 0.0 2.2 2 0 0 2 2 2 2 Nucleoside diphosphate kinase EF-hand_5 PF13202.6 ORF20666 - 2.2e-06 26.9 0.0 7.7e-06 25.2 0.1 1.8 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF20666 - 0.00023 20.8 0.1 0.00092 19.0 0.1 2.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF20666 - 0.00024 21.5 0.0 0.00059 20.2 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF20666 - 0.00033 20.0 0.1 0.0013 18.1 0.1 2.0 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF20666 - 0.048 13.5 0.0 0.3 11.0 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain pair DEK_C PF08766.11 ORF19014 - 0.003 17.4 0.0 0.0056 16.6 0.0 1.3 1 0 0 1 1 1 1 DEK C terminal domain Exo_endo_phos PF03372.23 ORF1748 - 1.2e-08 34.8 0.0 2.8e-08 33.6 0.0 1.7 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF1748 - 0.017 14.9 0.1 0.034 14.0 0.1 1.5 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase DUF1129 PF06570.11 ORF16611 - 0.11 12.0 0.1 0.18 11.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) IHABP4_N PF16174.5 ORF16611 - 1.4 9.5 9.5 1.9 9.1 8.2 1.8 2 0 0 2 2 2 0 Intracellular hyaluronan-binding protein 4 N-terminal FAM70 PF14967.6 ORF16611 - 3.5 7.0 7.3 6 6.2 7.3 1.3 1 0 0 1 1 1 0 FAM70 protein Peptidase_C26 PF07722.13 ORF148940 - 8.8e-19 68.1 0.0 1.3e-18 67.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF148940 - 6.9e-07 29.2 0.0 3.4e-06 27.0 0.0 2.1 2 1 0 2 2 2 1 Glutamine amidotransferase class-I GATase_5 PF13507.6 ORF148940 - 0.035 13.2 0.0 0.062 12.4 0.0 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Colicin_D PF11429.8 ORF148940 - 0.084 13.3 0.1 0.24 11.9 0.1 1.7 1 0 0 1 1 1 0 Colicin D zf-RING_2 PF13639.6 ORF139974 - 5.7e-09 36.2 2.9 5.7e-09 36.2 2.9 2.2 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF139974 - 9.9e-08 32.2 2.2 9.9e-08 32.2 2.2 2.0 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF139974 - 4.9e-06 26.5 0.6 4.9e-06 26.5 0.6 1.9 2 0 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF139974 - 6.9e-06 26.0 2.3 9.6e-06 25.5 1.1 2.0 2 0 0 2 2 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF139974 - 7.8e-06 25.7 2.1 2.4e-05 24.1 2.1 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF139974 - 6.5e-05 22.7 5.1 0.00055 19.7 5.1 2.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF139974 - 9.5e-05 22.1 4.5 9.5e-05 22.1 4.5 2.5 2 1 0 2 2 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF139974 - 0.00015 21.7 2.0 0.00036 20.4 2.0 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF139974 - 0.014 15.6 2.6 0.034 14.3 0.5 2.7 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING CMAS PF02353.20 ORF139974 - 0.026 13.8 0.4 0.039 13.3 0.4 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase zf-HC5HC2H_2 PF13832.6 ORF139974 - 0.049 13.8 1.7 0.073 13.2 0.2 2.0 2 0 0 2 2 2 0 PHD-zinc-finger like domain zf-C3HC4_3 PF13920.6 ORF139974 - 0.055 13.3 1.8 0.23 11.4 1.8 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF139974 - 0.063 12.9 4.0 0.24 11.0 4.1 2.1 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF139974 - 0.067 13.1 3.0 0.22 11.4 2.7 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 Oxidored_q4 PF00507.19 ORF139974 - 0.086 13.0 0.8 0.18 12.0 0.8 1.5 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MukB PF04310.12 ORF139974 - 0.17 11.7 0.2 0.28 10.9 0.2 1.3 1 0 0 1 1 1 0 MukB N-terminal RINGv PF12906.7 ORF139974 - 0.35 11.0 5.7 5.5 7.2 3.7 3.0 2 1 0 2 2 2 0 RING-variant domain Peptidase_C26 PF07722.13 ORF13770 - 8.8e-19 68.1 0.0 1.3e-18 67.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF13770 - 6.9e-07 29.2 0.0 3.4e-06 27.0 0.0 2.1 2 1 0 2 2 2 1 Glutamine amidotransferase class-I GATase_5 PF13507.6 ORF13770 - 0.035 13.2 0.0 0.062 12.4 0.0 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Colicin_D PF11429.8 ORF13770 - 0.084 13.3 0.1 0.24 11.9 0.1 1.7 1 0 0 1 1 1 0 Colicin D Whib PF02467.16 ORF134885 - 4.9 7.8 6.9 6.5 7.4 0.8 2.7 1 1 0 2 2 2 0 Transcription factor WhiB Orf78 PF06024.12 ORF134394 - 0.012 16.0 0.3 0.036 14.4 0.1 1.9 1 1 1 2 2 2 0 Orf78 (ac78) TMEM154 PF15102.6 ORF134394 - 0.014 15.3 2.0 0.014 15.3 2.0 2.7 1 1 2 3 3 3 0 TMEM154 protein family DUF4399 PF14347.6 ORF134394 - 0.034 14.5 0.2 0.08 13.3 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4399) TMEM51 PF15345.6 ORF134394 - 0.067 13.0 0.1 0.19 11.6 0.1 1.7 1 0 0 1 1 1 0 Transmembrane protein 51 RIC3 PF15361.6 ORF134394 - 0.098 13.0 0.0 0.25 11.7 0.0 1.7 1 1 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 DUF3675 PF12428.8 ORF134394 - 0.15 12.6 1.1 0.27 11.8 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3675) DUF4834 PF16118.5 ORF134394 - 6.8 7.7 0.0 6.8 7.7 0.0 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) zf-MIZ PF02891.20 ORF133791 - 1.6e-09 37.4 3.3 3.8e-09 36.1 3.3 1.7 1 1 0 1 1 1 1 MIZ/SP-RING zinc finger zf-Nse PF11789.8 ORF133791 - 5.7e-05 22.9 0.1 0.00011 22.0 0.1 1.5 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Ribosomal_L10 PF00466.20 ORF130025 - 6.9e-21 74.3 0.1 1.2e-20 73.4 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 ORF130025 - 2.9e-19 68.8 0.3 9.4e-19 67.2 0.2 1.9 2 0 0 2 2 2 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 ORF130025 - 0.0016 19.0 14.5 0.008 16.7 14.5 2.2 1 1 0 1 1 1 1 60s Acidic ribosomal protein CENP-T_C PF15511.6 ORF130025 - 0.12 12.5 0.3 0.26 11.4 0.3 1.5 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold Somatomedin_B PF01033.17 ORF128904 - 8e-05 23.0 12.8 0.00017 21.9 12.8 1.6 1 0 0 1 1 1 1 Somatomedin B domain BTB PF00651.31 ORF122854 - 1.4e-17 63.9 1.9 2.9e-17 62.9 1.9 1.5 1 0 0 1 1 1 1 BTB/POZ domain BACK PF07707.15 ORF122854 - 0.022 14.9 0.2 0.076 13.1 0.2 2.0 1 0 0 1 1 1 0 BTB And C-terminal Kelch PPP4R2 PF09184.11 ORF119802 - 0.0072 16.0 18.6 0.0072 16.0 18.6 2.2 2 0 0 2 2 2 1 PPP4R2 BUD22 PF09073.10 ORF119802 - 0.39 10.0 26.2 0.023 14.1 20.4 1.7 2 0 0 2 2 2 0 BUD22 DUF913 PF06025.12 ORF119802 - 0.78 8.7 8.4 1.5 7.7 8.4 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) RP-C_C PF11800.8 ORF119802 - 7.4 6.6 7.5 14 5.7 7.5 1.4 1 0 0 1 1 1 0 Replication protein C C-terminal region WWE PF02825.20 ORF119762 - 1.1e-12 48.4 0.6 3.5e-12 46.7 0.7 1.8 2 0 0 2 2 2 1 WWE domain WGR PF05406.15 ORF119762 - 0.064 13.3 0.1 0.064 13.3 0.1 3.0 3 0 0 3 3 3 0 WGR domain TAF4 PF05236.14 ORF119762 - 5.4 6.7 16.6 7.4 6.2 16.6 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family Glyco_hydro_16 PF00722.21 ORF119627 - 1.6e-14 53.8 0.0 2.4e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 SKN1 PF03935.15 ORF119627 - 0.002 16.6 0.0 1.3 7.3 0.0 2.8 3 0 0 3 3 3 2 Beta-glucan synthesis-associated protein (SKN1) SBP_bac_5 PF00496.22 ORF118526 - 1.6e-30 106.4 2.9 2.2e-30 105.9 2.9 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Succ_DH_flav_C PF02910.20 ORF117177 - 2.1e-39 134.4 0.1 3.4e-39 133.8 0.1 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term FAD_binding_2 PF00890.24 ORF117177 - 3e-31 108.9 0.1 2.5e-30 105.9 0.0 2.0 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF117177 - 0.0034 16.7 0.0 0.0053 16.0 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Myb_DNA-bind_4 PF13837.6 ORF117177 - 0.053 13.9 0.0 0.3 11.5 0.0 2.1 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain His_Phos_1 PF00300.22 ORF114120 - 0.0017 18.1 0.6 0.0034 17.1 0.0 1.7 2 0 0 2 2 2 1 Histidine phosphatase superfamily (branch 1) bVLRF1 PF18826.1 NODE_19704_length_991_cov_185.820084_g15088_i0reverse_frame_1 - 2.5e-10 40.4 0.7 5.4e-10 39.3 0.7 1.6 1 1 1 2 2 2 1 bacteroidetes VLRF1 release factor DUF591 PF04569.14 NODE_19704_length_991_cov_185.820084_g15088_i0reverse_frame_1 - 0.36 10.9 4.2 1.2 9.2 4.2 1.9 1 0 0 1 1 1 0 Protein of unknown function Paramecium_SA PF01508.16 NODE_19702_length_991_cov_188.915272_g15086_i0forward_frame_1 - 6 7.4 11.0 1.6e+02 2.8 11.0 2.8 1 1 0 1 1 1 0 Paramecium surface antigen domain TPR_9 PF13371.6 NODE_19584_length_995_cov_305.290625_g716_i2reverse_frame_2 - 2.7e-05 24.2 0.1 6.3e-05 23.0 0.1 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_19584_length_995_cov_305.290625_g716_i2reverse_frame_2 - 0.00022 20.9 0.6 0.089 12.6 0.1 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_19584_length_995_cov_305.290625_g716_i2reverse_frame_2 - 0.00027 20.8 3.8 0.0043 17.1 0.3 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_19584_length_995_cov_305.290625_g716_i2reverse_frame_2 - 0.069 13.7 0.3 1.4 9.4 0.0 2.7 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_19584_length_995_cov_305.290625_g716_i2reverse_frame_2 - 0.24 11.7 3.0 4.3 7.7 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Cornifin PF02389.15 NODE_19548_length_996_cov_295.150884_g14956_i0forward_frame_3 - 0.00023 21.4 18.9 0.021 15.0 3.0 3.5 2 2 1 3 3 3 3 Cornifin (SPRR) family GlcNAc-1_reg PF18440.1 ORF98849 - 0.12 12.6 1.5 1.6 9.0 0.5 2.6 2 0 0 2 2 2 0 Putative GlcNAc-1 phosphotransferase regulatory domain zf-C5HC2 PF02928.16 ORF98849 - 0.35 11.3 2.5 0.8 10.1 2.5 1.7 1 0 0 1 1 1 0 C5HC2 zinc finger Prominin PF05478.11 ORF95736 - 0.25 9.2 0.0 0.38 8.7 0.0 1.2 1 0 0 1 1 1 0 Prominin Pkinase PF00069.25 ORF95581 - 2.4e-39 135.3 0.1 3.4e-39 134.8 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF95581 - 2.7e-24 85.9 0.0 3.7e-24 85.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF95581 - 6.5e-08 32.2 0.0 9.7e-08 31.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF95581 - 1.3e-06 27.4 0.9 0.00025 20.0 0.0 2.1 2 0 0 2 2 2 2 Fungal protein kinase Pkinase PF00069.25 ORF92435 - 2.4e-39 135.3 0.1 3.4e-39 134.8 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92435 - 2.7e-24 85.9 0.0 3.7e-24 85.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF92435 - 6.5e-08 32.2 0.0 9.7e-08 31.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF92435 - 1.2e-06 27.6 0.6 0.00025 20.0 0.0 2.1 2 0 0 2 2 2 2 Fungal protein kinase IBR PF01485.21 ORF9060 - 0.0046 17.1 16.1 0.012 15.8 16.1 1.7 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain Aldo_ket_red PF00248.21 ORF88338 - 2.6e-18 66.2 0.0 3.6e-18 65.8 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family CCB1 PF12046.8 ORF8035 - 0.18 11.1 0.0 0.3 10.4 0.0 1.4 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B Patatin PF01734.22 ORF79836 - 1e-19 71.5 0.0 2.5e-19 70.3 0.0 1.6 1 1 0 1 1 1 1 Patatin-like phospholipase PDDEXK_3 PF13366.6 ORF79836 - 0.04 14.3 0.2 0.2 12.0 0.2 2.1 1 1 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Peptidase_C13 PF01650.18 ORF71458 - 2.7e-18 66.4 0.3 3.8e-18 65.9 0.3 1.1 1 0 0 1 1 1 1 Peptidase C13 family Ank_4 PF13637.6 ORF70066 - 6.7e-24 84.0 2.5 3e-09 37.2 0.2 3.3 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF70066 - 1.7e-19 70.2 0.0 9.3e-15 55.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF70066 - 2.4e-18 65.9 0.5 2.3e-12 46.9 0.0 4.1 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF70066 - 3.3e-16 58.9 1.5 1.1e-06 28.8 0.0 3.6 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF70066 - 3.7e-14 51.4 0.1 3.2e-05 24.0 0.0 4.2 5 0 0 5 5 5 3 Ankyrin repeat WW PF00397.26 ORF70066 - 0.025 14.7 0.4 0.061 13.4 0.4 1.7 1 0 0 1 1 1 0 WW domain DAO PF01266.24 ORF69689 - 8.6e-24 84.8 0.0 1.1e-23 84.5 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Glycos_transf_1 PF00534.20 ORF68528 - 5.6e-16 58.6 0.0 8.1e-16 58.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF68528 - 2.7e-13 50.5 0.0 3.9e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF68528 - 0.0003 21.1 0.0 0.00056 20.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Sugar_tr PF00083.24 ORF59307 - 1.8e-22 79.9 10.4 2.4e-22 79.4 10.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MTABC_N PF16185.5 ORF59307 - 0.013 15.0 5.9 0.026 14.0 5.9 1.5 1 1 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region eIF-5_eIF-2B PF01873.17 ORF49796 - 0.071 13.0 3.1 7.6 6.4 0.1 3.3 3 0 0 3 3 3 0 Domain found in IF2B/IF5 BUD22 PF09073.10 ORF47558 - 7.8e-05 22.2 22.9 0.00014 21.4 22.9 1.4 1 0 0 1 1 1 1 BUD22 Cwf_Cwc_15 PF04889.12 ORF47558 - 0.001 18.8 29.7 0.001 18.8 29.7 1.7 2 0 0 2 2 2 1 Cwf15/Cwc15 cell cycle control protein PPP4R2 PF09184.11 ORF47558 - 0.0034 17.0 22.1 0.0034 17.0 22.1 2.0 2 0 0 2 2 2 1 PPP4R2 Fve PF09259.11 ORF47558 - 0.066 13.4 0.8 0.17 12.1 0.2 1.9 2 1 0 2 2 2 0 Fungal immunomodulatory protein Fve DUF2457 PF10446.9 ORF47558 - 3.3 6.8 39.4 4.5 6.3 39.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) CDC27 PF09507.10 ORF47558 - 3.6 6.9 29.3 0.018 14.5 19.6 1.9 2 0 0 2 2 2 0 DNA polymerase subunit Cdc27 DUF913 PF06025.12 ORF47558 - 3.7 6.4 11.2 7.3 5.5 11.2 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF2722 PF10846.8 ORF47558 - 5 5.9 12.7 7.6 5.4 12.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) DUF3295 PF11702.8 ORF47558 - 7 5.9 21.7 11 5.2 21.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) TFB6 PF17110.5 ORF47558 - 8.1 6.2 14.2 18 5.0 14.2 1.7 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF4668 PF15701.5 ORF39374 - 0.43 10.4 3.1 0.88 9.4 3.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) TauD PF02668.16 ORF38565 - 2.3e-24 86.6 0.0 1.2e-23 84.3 0.0 1.9 1 1 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family CsiD PF08943.10 ORF38565 - 0.0015 17.7 0.0 0.0022 17.2 0.0 1.2 1 0 0 1 1 1 1 CsiD DUF2016 PF09436.10 ORF38565 - 0.02 14.7 0.0 0.27 11.1 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF2016) RIO1 PF01163.22 ORF38346 - 8e-45 152.8 0.2 8e-45 152.8 0.2 1.5 2 0 0 2 2 2 1 RIO1 family APH PF01636.23 ORF38346 - 3e-08 33.9 0.9 0.00017 21.6 0.2 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 ORF38346 - 4e-07 29.6 0.2 7.1e-06 25.5 0.2 2.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Rio2_N PF09202.11 ORF38346 - 1e-06 28.9 2.3 1.2e-06 28.6 0.4 2.2 3 0 0 3 3 3 1 Rio2, N-terminal Kinase-like PF14531.6 ORF38346 - 0.066 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Kinase-like Jacalin PF01419.17 ORF37133 - 0.0017 18.3 0.1 0.065 13.2 0.1 2.5 2 0 0 2 2 2 1 Jacalin-like lectin domain AGA2 PF17366.2 ORF37133 - 0.05 13.3 3.1 0.9 9.3 0.1 2.7 2 0 0 2 2 2 0 A-agglutinin-binding subunit Aga2 NolX PF05819.11 ORF30061 - 0.12 11.7 5.0 0.044 13.1 2.0 1.6 2 0 0 2 2 2 0 NolX protein Ribosomal_S26e PF01283.19 ORF30061 - 0.14 12.6 0.8 0.45 11.0 0.8 1.7 1 1 0 1 1 1 0 Ribosomal protein S26e DUF3439 PF11921.8 ORF30061 - 4.6 7.2 14.3 2.4 8.1 6.5 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF3439) Zeta_toxin PF06414.12 ORF24800 - 0.03 13.6 0.0 0.062 12.6 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 ORF24800 - 0.1 13.0 0.0 0.3 11.4 0.0 1.9 2 1 0 2 2 2 0 AAA ATPase domain Phage_HK97_TLTM PF06120.11 ORF16529 - 0.16 11.1 9.2 0.34 10.1 5.9 2.4 2 0 0 2 2 2 0 Tail length tape measure protein Selenoprotein_S PF06936.11 ORF16529 - 0.72 9.6 5.8 1.2 8.9 5.8 1.3 1 0 0 1 1 1 0 Selenoprotein S (SelS) Histone_HNS PF00816.21 ORF16529 - 4.5 8.2 6.0 3.1 8.7 2.2 2.4 3 0 0 3 3 3 0 H-NS histone family Herpes_ORF11 PF04797.13 ORF151254 - 0.1 11.4 0.0 0.18 10.6 0.0 1.3 1 0 0 1 1 1 0 Herpesvirus dUTPase protein DUF4351 PF14261.6 ORF141317 - 0.11 12.5 0.4 0.4 10.8 0.4 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4351) YolD PF08863.10 ORF141317 - 0.2 11.8 1.3 3.1 7.9 0.1 2.8 2 1 1 3 3 3 0 YolD-like protein Imm50 PF15594.6 ORF141317 - 3 8.1 6.0 23 5.3 0.2 4.0 3 2 0 3 3 3 0 Immunity protein 50 Pkinase PF00069.25 ORF140365 - 4.1e-23 82.1 0.0 2.2e-22 79.7 0.0 2.1 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF140365 - 4.9e-06 26.0 0.0 1.5e-05 24.5 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase Pkinase PF00069.25 ORF139722 - 1.3e-35 123.0 0.0 1.9e-35 122.5 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF139722 - 1.2e-15 57.5 0.0 1.7e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF139722 - 0.0022 16.8 0.1 0.0089 14.9 0.0 1.8 2 0 0 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF139722 - 0.11 12.4 0.1 0.11 12.4 0.1 1.5 2 0 0 2 2 2 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF139722 - 0.15 11.6 0.0 0.29 10.7 0.0 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 NHase_alpha PF02979.16 ORF138271 - 0.02 14.2 1.0 0.038 13.3 1.0 1.4 1 0 0 1 1 1 0 Nitrile hydratase, alpha chain CdiI_2 PF18593.1 ORF126018 - 0.06 14.0 1.8 0.18 12.5 1.8 1.9 1 0 0 1 1 1 0 CdiI immunity protein zf-CCHC PF00098.23 ORF126018 - 0.17 12.0 0.2 0.31 11.2 0.2 1.5 1 0 0 1 1 1 0 Zinc knuckle DUF4668 PF15701.5 ORF118722 - 0.43 10.4 3.1 0.88 9.4 3.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) DUF2475 PF10629.9 ORF117297 - 5.7e-07 29.7 2.0 0.013 15.7 0.0 3.4 3 0 0 3 3 3 2 Protein of unknown function (DUF2475) NUDIX PF00293.28 ORF11254 - 0.0049 16.9 0.0 0.011 15.8 0.0 1.5 2 0 0 2 2 2 1 NUDIX domain DUF1298 PF06974.13 ORF110783 - 0.00041 20.3 0.0 0.00074 19.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) Beta_helix PF13229.6 ORF110783 - 0.061 13.2 0.6 0.13 12.1 0.1 1.7 2 0 0 2 2 2 0 Right handed beta helix region Response_reg PF00072.24 ORF109965 - 3.5e-20 72.3 0.1 5.7e-20 71.6 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Ufd2P_core PF10408.9 ORF108058 - 2.7e-38 132.0 8.9 3.9e-38 131.5 8.9 1.2 1 0 0 1 1 1 1 Ubiquitin elongating factor core U-box PF04564.15 ORF108058 - 4.3e-20 71.7 1.2 1e-19 70.5 1.2 1.7 1 0 0 1 1 1 1 U-box domain Amidohydro_1 PF01979.20 ORF108058 - 0.0019 17.6 0.1 0.0087 15.4 0.0 1.9 2 0 0 2 2 2 1 Amidohydrolase family Phage_HK97_TLTM PF06120.11 ORF107457 - 0.5 9.5 12.2 0.34 10.1 5.9 2.5 2 1 0 2 2 2 0 Tail length tape measure protein Selenoprotein_S PF06936.11 ORF107457 - 0.73 9.6 5.8 1.2 8.9 5.8 1.3 1 0 0 1 1 1 0 Selenoprotein S (SelS) Histone_HNS PF00816.21 ORF107457 - 3.5 8.5 5.6 3.1 8.7 2.2 2.4 2 1 1 3 3 3 0 H-NS histone family Pkinase PF00069.25 ORF106209 - 9.7e-63 212.0 0.0 1.2e-62 211.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF106209 - 7.8e-23 81.1 0.0 1.4e-22 80.2 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF106209 - 2.8e-08 34.0 0.0 3.3e-07 30.5 0.1 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF106209 - 0.0085 15.7 0.7 0.02 14.5 0.7 1.6 1 1 1 2 2 2 1 RIO1 family Kdo PF06293.14 ORF106209 - 0.011 15.1 0.0 0.015 14.6 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF106209 - 0.011 14.5 0.1 0.074 11.8 0.0 2.0 2 0 0 2 2 2 0 Fungal protein kinase Choline_kinase PF01633.20 ORF106209 - 0.1 12.2 0.1 0.18 11.4 0.1 1.4 1 0 0 1 1 1 0 Choline/ethanolamine kinase Ank_2 PF12796.7 ORF104733 - 2.5e-13 50.4 0.0 1.4e-05 25.5 0.0 2.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF104733 - 7.2e-08 32.1 0.0 0.0093 16.4 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 ORF104733 - 2.6e-06 27.6 0.2 0.0011 19.3 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF104733 - 9.8e-06 25.8 0.3 0.064 13.7 0.0 2.7 3 0 0 3 3 3 2 Ankyrin repeat Ank_4 PF13637.6 ORF104733 - 0.015 15.9 0.0 0.22 12.1 0.1 2.8 3 1 1 4 4 4 0 Ankyrin repeats (many copies) Transket_pyr PF02779.24 ORF103987 - 4.4e-44 150.3 0.0 5.7e-44 149.9 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF103987 - 4.8e-37 126.6 0.0 2.1e-36 124.5 0.0 2.0 2 0 0 2 2 2 1 Transketolase, C-terminal domain Rax2 PF12768.7 ORF100649 - 0.027 13.9 0.5 0.13 11.7 0.0 2.1 2 0 0 2 2 2 0 Cortical protein marker for cell polarity Podoplanin PF05808.11 ORF100649 - 0.047 13.8 0.3 0.13 12.4 0.3 1.7 1 1 0 1 1 1 0 Podoplanin FXMRP1_C_core PF12235.8 ORF100649 - 0.22 12.2 5.5 0.52 10.9 5.5 1.7 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal Pkinase PF00069.25 NODE_19725_length_990_cov_461.300524_g15106_i0reverse_frame_1 - 4.4e-43 147.6 0.1 5.7e-43 147.2 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_19725_length_990_cov_461.300524_g15106_i0reverse_frame_1 - 1.7e-21 76.7 0.0 2.8e-21 76.0 0.0 1.3 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_19725_length_990_cov_461.300524_g15106_i0reverse_frame_1 - 0.11 11.8 0.0 0.21 10.9 0.0 1.6 1 1 1 2 2 2 0 Kinase-like Transglut_core PF01841.19 NODE_19704_length_991_cov_185.820084_g15088_i0reverse_frame_3 - 0.066 13.7 2.3 1.4 9.4 0.3 2.3 2 0 0 2 2 2 0 Transglutaminase-like superfamily Plasmodium_HRP PF05403.11 NODE_19702_length_991_cov_188.915272_g15086_i0reverse_frame_3 - 8.6e-10 38.8 16.6 8.6e-10 38.8 16.6 1.6 2 0 0 2 2 2 1 Plasmodium histidine-rich protein (HRPII/III) DUF4573 PF15140.6 NODE_19702_length_991_cov_188.915272_g15086_i0reverse_frame_3 - 7.8e-08 32.3 11.9 7.8e-08 32.3 11.9 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF4573) DUF2931 PF11153.8 NODE_19657_length_992_cov_430.621735_g3293_i5forward_frame_3 - 0.094 12.4 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) adh_short PF00106.25 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 1.3e-33 116.1 0.0 1.7e-33 115.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 3.8e-17 62.6 0.0 5.4e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 0.00013 21.9 0.0 0.00024 21.1 0.0 1.4 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 0.013 14.9 0.0 0.03 13.7 0.0 1.6 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) ApbA PF02558.16 NODE_19628_length_993_cov_917.827766_g15023_i0reverse_frame_3 - 0.087 12.5 0.0 0.19 11.4 0.0 1.6 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pkinase PF00069.25 ORF9857 - 6.7e-47 160.1 2.3 6.7e-47 160.1 2.3 1.8 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9857 - 1.2e-32 113.3 1.0 1.2e-32 113.3 1.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF9857 - 0.011 15.0 0.1 0.021 14.1 0.1 1.5 1 1 0 1 1 1 0 Kinase-like EF-hand_7 PF13499.6 ORF9857 - 0.026 14.9 0.2 0.1 13.0 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain pair DUF2587 PF10759.9 ORF9857 - 0.053 13.0 0.1 0.088 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2587) EF-hand_6 PF13405.6 ORF9857 - 0.067 13.2 0.0 0.24 11.4 0.0 2.0 1 0 0 1 1 1 0 EF-hand domain PAP_fibrillin PF04755.12 ORF9857 - 0.18 11.7 1.3 0.2 11.6 0.3 1.6 2 0 0 2 2 2 0 PAP_fibrillin Peripla_BP_3 PF13377.6 ORF98225 - 7.7e-45 153.2 0.0 1.4e-44 152.4 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF98225 - 2.5e-36 125.5 0.0 3.3e-36 125.2 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 ORF98225 - 4.5e-19 68.0 0.6 7.3e-19 67.3 0.6 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 ORF98225 - 1.6e-13 50.8 0.0 1.1e-12 48.1 0.0 2.1 1 1 0 1 1 1 1 Periplasmic binding protein domain Peptidase_C1 PF00112.23 ORF95136 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF95136 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF95136 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF95136 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane bZIP_1 PF00170.21 ORF90577 - 3.5e-08 33.4 6.6 4.4e-08 33.1 4.0 2.4 2 0 0 2 2 2 1 bZIP transcription factor bZIP_2 PF07716.15 ORF90577 - 0.0042 17.1 5.2 0.0042 17.1 5.2 2.0 2 0 0 2 2 2 1 Basic region leucine zipper BET PF17035.5 ORF90577 - 0.05 13.8 0.2 0.23 11.6 0.1 2.3 2 0 0 2 2 2 0 Bromodomain extra-terminal - transcription regulation Use1 PF09753.9 ORF90577 - 0.092 12.5 4.8 0.06 13.1 2.6 1.8 1 1 0 1 1 1 0 Membrane fusion protein Use1 BLOC1_2 PF10046.9 ORF90577 - 0.39 11.0 5.1 14 6.0 0.0 3.1 2 1 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Fib_alpha PF08702.10 ORF90577 - 0.41 10.8 8.9 3.7 7.7 4.8 2.5 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF4407 PF14362.6 ORF90577 - 3.9 6.7 5.0 5.6 6.2 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) zf-RING_10 PF16685.5 ORF90451 - 0.025 14.7 0.9 0.43 10.7 0.1 2.4 2 0 0 2 2 2 0 zinc RING finger of MSL2 OST3_OST6 PF04756.13 ORF8825 - 1.3e-45 156.0 2.7 1.6e-45 155.7 2.7 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family SHIPPO-rpt PF07004.12 ORF85120 - 1.3e-06 29.0 16.8 0.16 13.0 0.1 5.4 5 1 0 5 5 5 3 Sperm-tail PG-rich repeat Peptidase_C1 PF00112.23 ORF83812 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF83812 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF83812 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF83812 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF81357 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF81357 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF81357 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF81357 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Esterase PF00756.20 ORF81167 - 2.3e-39 135.6 0.0 3e-39 135.2 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF81167 - 0.00028 20.4 0.0 0.00044 19.8 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 ORF81167 - 0.027 14.3 0.0 0.039 13.7 0.0 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase Kazal_2 PF07648.15 ORF81167 - 0.14 12.3 0.4 0.3 11.3 0.4 1.5 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain Arm PF00514.23 ORF79818 - 0.00077 19.4 0.2 3.5 7.8 0.2 4.0 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat KGG PF10685.9 ORF79818 - 0.63 10.4 2.6 0.4 11.0 0.4 1.9 2 0 0 2 2 2 0 Stress-induced bacterial acidophilic repeat motif Peptidase_C1 PF00112.23 ORF74190 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF74190 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF74190 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF74190 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_S10 PF00450.22 ORF63507 - 4.3e-59 201.0 2.0 5.6e-59 200.6 2.0 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase DUF5499 PF17603.2 ORF59241 - 0.092 13.4 3.8 0.13 12.9 1.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5499) Peptidase_C1 PF00112.23 ORF54161 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF54161 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF54161 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF54161 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane LELP1 PF15042.6 ORF48530 - 2.5 8.5 6.8 0.32 11.4 0.7 2.2 2 0 0 2 2 2 0 Late cornified envelope-like proline-rich protein 1 Peptidase_C1 PF00112.23 ORF47708 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF47708 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF47708 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF47708 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Kelch_1 PF01344.25 ORF45037 - 2.1e-31 107.2 8.9 2.5e-09 36.6 0.0 5.8 6 0 0 6 6 6 4 Kelch motif Kelch_6 PF13964.6 ORF45037 - 2.5e-20 72.0 5.7 4.5e-05 23.6 0.0 5.5 3 2 3 6 6 6 4 Kelch motif Kelch_4 PF13418.6 ORF45037 - 2.1e-15 56.4 9.0 2.9e-07 30.4 0.8 4.3 3 1 1 4 4 4 4 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF45037 - 3.3e-15 55.3 5.6 3.3e-05 23.7 0.0 5.5 5 1 0 5 5 5 4 Kelch motif Kelch_5 PF13854.6 ORF45037 - 3.4e-14 52.4 6.6 6.2e-05 22.9 0.0 4.3 5 0 0 5 5 5 3 Kelch motif Kelch_3 PF13415.6 ORF45037 - 6.5e-07 29.5 11.9 0.31 11.4 0.4 5.6 5 0 0 5 5 5 2 Galactose oxidase, central domain Peptidase_C1 PF00112.23 ORF44465 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF44465 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF44465 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF44465 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF41875 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF41875 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF41875 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF41875 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF40579 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF40579 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF40579 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF40579 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF3851 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF3851 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF3851 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF3851 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane SIR2 PF02146.17 ORF38078 - 6.3e-20 71.8 0.1 1e-19 71.1 0.1 1.3 1 0 0 1 1 1 1 Sir2 family DUF3568 PF12092.8 ORF380 - 0.92 9.6 3.1 1.3 9.1 1.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3568) PAS_4 PF08448.10 ORF3655 - 0.15 12.3 0.6 0.52 10.6 0.1 2.0 2 1 1 3 3 3 0 PAS fold Peptidase_C1 PF00112.23 ORF32635 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF32635 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF32635 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF32635 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane RCC1_2 PF13540.6 ORF31229 - 2e-09 37.0 6.7 0.096 12.5 0.3 4.5 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat PH_TFIIH PF08567.11 ORF31229 - 0.09 13.1 0.3 5.5 7.4 0.1 2.4 1 1 1 2 2 2 0 TFIIH p62 subunit, N-terminal domain DUF155 PF02582.14 ORF31229 - 3 7.9 7.3 43 4.1 0.0 3.8 2 1 2 4 4 4 0 Uncharacterised ACR, YagE family COG1723 RPN7 PF10602.9 ORF30297 - 2.6e-43 147.7 3.2 3.9e-43 147.2 3.2 1.3 1 0 0 1 1 1 1 26S proteasome subunit RPN7 PCI PF01399.27 ORF30297 - 1.1e-15 58.0 0.1 2.3e-15 57.0 0.1 1.6 1 0 0 1 1 1 1 PCI domain FeoC PF09012.10 ORF30297 - 0.006 16.6 0.0 0.016 15.2 0.0 1.7 1 0 0 1 1 1 1 FeoC like transcriptional regulator LMBR1 PF04791.16 ORF30297 - 0.11 11.4 0.4 0.16 10.8 0.4 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein cNMP_binding PF00027.29 ORF19569 - 0.16 12.0 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain MORN PF02493.20 ORF19259 - 0.00037 20.2 1.0 0.00093 19.0 0.1 2.2 2 0 0 2 2 2 1 MORN repeat IBD PF10416.9 ORF19259 - 0.002 18.1 1.1 0.0055 16.7 1.1 1.7 1 0 0 1 1 1 1 Transcription-initiator DNA-binding domain IBD DUF1803 PF08820.10 ORF19259 - 2.8 8.0 8.3 21 5.2 8.1 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF1803) ACP PF06857.11 ORF19259 - 6.5 7.1 6.2 1.3 9.3 0.6 2.6 3 0 0 3 3 3 0 Malonate decarboxylase delta subunit (MdcD) XhlA PF10779.9 ORF18617 - 0.6 10.3 6.6 0.28 11.4 2.9 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Peptidase_C1 PF00112.23 ORF17098 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF17098 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF17098 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF17098 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF17091 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF17091 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF17091 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF17091 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane PPP4R2 PF09184.11 ORF151537 - 0.0027 17.3 16.1 0.0027 17.3 16.1 2.2 2 0 0 2 2 2 1 PPP4R2 BUD22 PF09073.10 ORF151537 - 0.54 9.5 25.1 0.032 13.6 19.2 1.7 2 0 0 2 2 2 0 BUD22 DUF913 PF06025.12 ORF151537 - 0.8 8.6 8.1 1.5 7.7 8.1 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) RP-C_C PF11800.8 ORF151537 - 5.9 6.9 7.2 11 6.0 7.2 1.4 1 0 0 1 1 1 0 Replication protein C C-terminal region GHMP_kinases_N PF00288.26 ORF150370 - 2.3e-07 30.9 0.2 6.6e-07 29.5 0.0 1.9 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 ORF150370 - 0.00062 20.1 0.1 0.0048 17.2 0.1 2.4 2 1 0 2 2 2 1 GHMP kinases C terminal Peptidase_C1 PF00112.23 ORF1500 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF1500 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF1500 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF1500 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF14491 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF14491 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF14491 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF14491 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Pkinase PF00069.25 ORF143259 - 2.9e-33 115.3 0.0 4e-33 114.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF143259 - 0.0016 17.7 0.0 0.0034 16.7 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF143259 - 0.071 12.4 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Kdo PF06293.14 ORF143259 - 0.18 11.2 0.1 0.34 10.2 0.0 1.5 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family DHHC PF01529.20 ORF141010 - 2.9e-12 46.9 1.6 2.9e-12 46.9 1.6 2.2 1 1 1 2 2 2 1 DHHC palmitoyltransferase CRAL_TRIO PF00650.20 ORF139014 - 2.6e-19 69.5 0.0 3.6e-19 69.0 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain AsnA PF03590.15 ORF13403 - 4.6e-93 311.1 0.0 5.5e-93 310.9 0.0 1.1 1 0 0 1 1 1 1 Aspartate-ammonia ligase tRNA-synt_2 PF00152.20 ORF13403 - 0.00026 20.2 0.0 0.005 16.0 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class II (D, K and N) DUF5569 PF17729.1 ORF13403 - 0.22 11.4 0.0 0.37 10.6 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5569) Carb_anhydrase PF00194.21 ORF134009 - 5.7e-33 114.5 0.3 7.9e-33 114.0 0.3 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Peptidase_C1 PF00112.23 ORF131817 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF131817 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF131817 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF131817 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Mito_carr PF00153.27 ORF129965 - 8.5e-60 198.7 1.4 6.9e-25 86.8 0.0 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein Pilus_CpaD PF09476.10 ORF129965 - 0.047 13.4 0.0 0.099 12.4 0.0 1.5 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) Peptidase_C1 PF00112.23 ORF128917 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF128917 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF128917 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF128917 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Glycolytic PF00274.19 ORF128705 - 5.7e-62 209.5 0.0 6.9e-62 209.2 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Peptidase_C1 PF00112.23 ORF127845 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF127845 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF127845 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF127845 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Pkinase PF00069.25 ORF127620 - 3.1e-36 125.1 0.0 4.3e-36 124.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF127620 - 3.3e-20 72.4 0.0 1.6e-19 70.2 0.0 1.9 1 1 1 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF127620 - 0.0033 17.4 0.1 0.013 15.4 0.1 1.8 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF127620 - 0.0087 15.4 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF127620 - 0.036 13.4 0.2 0.14 11.5 0.1 1.8 1 1 1 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Peptidase_C1 PF00112.23 ORF126149 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF126149 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF126149 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF126149 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Peptidase_C1 PF00112.23 ORF125797 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF125797 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF125797 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF125797 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane DUF4441 PF14536.6 ORF121565 - 0.3 11.3 23.9 0.032 14.4 17.1 2.8 2 2 0 2 2 2 0 Domain of unknown function (DUF4441) FUSC PF04632.12 ORF118741 - 0.26 9.8 23.3 0.32 9.5 23.3 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF3584 PF12128.8 ORF118741 - 2.8 5.3 42.5 3.6 5.0 42.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) RR_TM4-6 PF06459.12 ORF118741 - 4.5 7.0 20.5 6.5 6.5 20.5 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 MitMem_reg PF13012.6 ORF118358 - 6.6e-12 45.8 1.5 2.1e-11 44.2 1.5 1.9 1 1 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 ORF118358 - 0.00033 20.6 0.1 0.0008 19.4 0.1 1.7 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease T4_Rnl2_C PF18043.1 ORF118358 - 0.048 13.8 0.1 0.16 12.1 0.1 1.9 1 0 0 1 1 1 0 T4 RNA ligase 2 C-terminal Fer4_15 PF13459.6 ORF117948 - 0.12 13.1 0.3 0.37 11.6 0.3 1.8 1 0 0 1 1 1 0 4Fe-4S single cluster domain EF-hand_7 PF13499.6 ORF114332 - 3.6e-05 24.1 0.1 0.014 15.8 0.0 1.6 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF114332 - 0.0046 16.8 0.0 0.0094 15.8 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF114332 - 0.0067 16.3 0.0 0.038 13.9 0.0 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF114332 - 0.0095 15.4 0.0 0.02 14.4 0.0 1.6 1 0 0 1 1 1 1 EF hand SPARC_Ca_bdg PF10591.9 ORF114332 - 0.091 13.1 0.0 0.21 11.9 0.0 1.6 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region Glyco_hydro_92 PF07971.12 ORF114214 - 4.6e-45 154.4 0.0 5.8e-45 154.1 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 92 Nramp PF01566.18 ORF11250 - 6.2e-53 180.0 0.2 6.2e-53 180.0 0.2 1.5 2 0 0 2 2 2 1 Natural resistance-associated macrophage protein Exostosin PF03016.15 ORF110353 - 9.9e-07 28.3 0.0 1.4e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Exostosin family InaF-motif PF15018.6 ORF108999 - 5.5 7.0 6.1 9.4 6.2 6.1 1.3 1 0 0 1 1 1 0 TRP-interacting helix UPF0093 PF03653.13 ORF107598 - 0.028 14.6 0.5 0.17 12.1 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0093) Peptidase_C1 PF00112.23 ORF104593 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF104593 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF104593 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF104593 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane RPN7 PF10602.9 ORF103492 - 2.6e-43 147.7 3.2 3.9e-43 147.2 3.2 1.3 1 0 0 1 1 1 1 26S proteasome subunit RPN7 PCI PF01399.27 ORF103492 - 1.1e-15 58.0 0.1 2.3e-15 57.0 0.1 1.6 1 0 0 1 1 1 1 PCI domain FeoC PF09012.10 ORF103492 - 0.006 16.6 0.0 0.016 15.2 0.0 1.7 1 0 0 1 1 1 1 FeoC like transcriptional regulator LMBR1 PF04791.16 ORF103492 - 0.11 11.4 0.4 0.16 10.8 0.4 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Peptidase_C1 PF00112.23 ORF102931 - 3.2e-58 197.4 0.6 5.3e-58 196.7 0.6 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF102931 - 1.2e-13 51.3 4.2 1.2e-13 51.3 4.2 2.7 3 0 0 3 3 3 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF102931 - 9.6e-07 27.9 1.4 0.02 13.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Form-deh_trans PF09163.11 ORF102931 - 0.12 12.2 3.5 3.9 7.3 0.0 2.4 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane SUR7 PF06687.12 ORF100780 - 6.2e-05 22.7 2.0 0.0036 17.0 0.0 2.1 1 1 1 2 2 2 1 SUR7/PalI family Sigma_reg_N PF13800.6 ORF100780 - 0.0074 16.6 5.2 0.38 11.1 0.2 3.2 3 0 0 3 3 3 1 Sigma factor regulator N-terminal SdpI PF13630.6 ORF100780 - 0.03 14.5 0.1 0.03 14.5 0.1 3.1 3 0 0 3 3 3 0 SdpI/YhfL protein family MFS_Mycoplasma PF07672.13 ORF100780 - 0.042 13.1 4.2 0.73 9.1 0.1 2.5 3 0 0 3 3 3 0 Mycoplasma MFS transporter Orf78 PF06024.12 ORF100780 - 0.052 13.9 1.6 11 6.4 0.0 2.6 3 0 0 3 3 3 0 Orf78 (ac78) DUF2207 PF09972.9 ORF100780 - 0.12 11.1 6.9 3.8 6.2 0.0 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF100780 - 0.34 11.2 10.7 4.3 7.7 0.4 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) DUF4834 PF16118.5 ORF100780 - 1.6 9.8 10.3 3.4 8.7 0.3 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks52.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks52.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks52.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks52.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:32 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SHIPPO-rpt PF07004.12 ORF100171 - 1.3e-06 29.0 16.8 0.16 13.0 0.1 5.4 5 1 0 5 5 5 3 Sperm-tail PG-rich repeat YtfJ_HI0045 PF09695.10 NODE_19725_length_990_cov_461.300524_g15106_i0reverse_frame_2 - 0.16 11.6 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (YtfJ_HI0045) DUF2254 PF10011.9 NODE_19725_length_990_cov_461.300524_g15106_i0forward_frame_2 - 0.091 11.6 1.1 0.12 11.1 1.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) IBR PF01485.21 ORF98175 - 0.011 16.0 14.1 0.011 16.0 14.1 4.0 3 3 0 3 3 3 0 IBR domain, a half RING-finger domain Pkinase PF00069.25 ORF9680 - 2.4e-39 135.3 0.1 3.4e-39 134.8 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9680 - 2.7e-24 85.9 0.0 3.6e-24 85.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF9680 - 6.4e-08 32.2 0.0 9.6e-08 31.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF9680 - 1.4e-06 27.4 0.8 0.00024 20.0 0.0 2.1 2 0 0 2 2 2 2 Fungal protein kinase Metallophos PF00149.28 ORF90652 - 3.7e-07 30.8 2.2 6.5e-07 30.1 1.2 1.8 2 1 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF90652 - 0.024 15.5 0.1 0.059 14.2 0.1 1.7 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C URO-D PF01208.17 ORF90652 - 0.1 11.7 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) DUF1998 PF09369.10 ORF89074 - 5.5e-18 65.5 1.2 1.3e-17 64.3 1.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) Aminotran_4 PF01063.19 ORF85958 - 1.2e-17 64.6 0.0 1.5e-17 64.2 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV MCR_beta_N PF02783.15 ORF85958 - 0.013 15.1 0.4 0.02 14.5 0.4 1.4 1 0 0 1 1 1 0 Methyl-coenzyme M reductase beta subunit, N-terminal domain Formin_GBD_N PF18382.1 ORF85958 - 0.12 12.8 0.0 0.3 11.6 0.0 1.6 1 0 0 1 1 1 0 Formin N-terminal GTPase-binding domain Porin_8 PF16966.5 ORF85082 - 5.2e-144 479.7 21.4 5.9e-144 479.5 21.4 1.0 1 0 0 1 1 1 1 Porin-like glycoporin RafY NAP PF00956.18 ORF8138 - 1.4e-58 198.2 6.0 1.4e-58 198.2 6.0 1.4 2 0 0 2 2 2 1 Nucleosome assembly protein (NAP) BUD22 PF09073.10 ORF8138 - 0.3 10.4 17.3 0.42 9.9 17.3 1.2 1 0 0 1 1 1 0 BUD22 ig PF00047.25 ORF8138 - 0.51 10.6 4.1 1 9.6 4.1 1.4 1 0 0 1 1 1 0 Immunoglobulin domain NOA36 PF06524.12 ORF8138 - 3.3 6.9 13.1 6.3 6.0 13.1 1.4 1 0 0 1 1 1 0 NOA36 protein MORN PF02493.20 ORF75797 - 0.00092 19.0 0.1 0.00092 19.0 0.1 2.8 4 0 0 4 4 4 1 MORN repeat YiiD_C PF09500.10 ORF72760 - 4.4e-48 162.8 0.0 6.3e-48 162.3 0.0 1.2 1 0 0 1 1 1 1 Putative thioesterase (yiiD_Cterm) Acetyltransf_1 PF00583.25 ORF72760 - 1.1e-13 51.4 0.0 1.8e-13 50.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF72760 - 3.1e-13 49.8 0.0 5.3e-13 49.0 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF72760 - 9.9e-08 32.3 0.0 1.9e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_5 PF13444.6 ORF72760 - 6.3e-05 23.6 0.0 0.00012 22.8 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF72760 - 0.00088 19.2 0.0 0.0022 17.9 0.0 1.7 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 ORF72760 - 0.0014 18.7 0.0 0.0028 17.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain DUF4442 PF14539.6 ORF72760 - 0.0019 18.4 0.0 0.0033 17.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) ATE_C PF04377.15 ORF72760 - 0.038 14.6 0.0 0.069 13.8 0.0 1.3 1 0 0 1 1 1 0 Arginine-tRNA-protein transferase, C terminus GTP-bdg_N PF13167.6 ORF64572 - 0.052 14.2 0.4 0.12 13.1 0.4 1.6 1 0 0 1 1 1 0 GTP-binding GTPase N-terminal MORN PF02493.20 ORF63256 - 0.00036 20.3 1.0 0.00092 19.0 0.1 2.3 2 0 0 2 2 2 1 MORN repeat IBD PF10416.9 ORF63256 - 0.0018 18.3 1.1 0.0055 16.7 1.1 1.8 1 0 0 1 1 1 1 Transcription-initiator DNA-binding domain IBD DUF1803 PF08820.10 ORF63256 - 2.8 8.0 8.3 21 5.3 8.1 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF1803) ACP PF06857.11 ORF63256 - 5.8 7.2 6.0 1.3 9.3 0.6 2.6 3 0 0 3 3 3 0 Malonate decarboxylase delta subunit (MdcD) Cyclin PF08613.11 ORF59148 - 7.6e-13 49.1 0.2 1.1e-12 48.6 0.2 1.5 1 1 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 ORF59148 - 4.3e-06 26.5 0.6 8.7e-06 25.5 0.6 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain DUF1461 PF07314.11 ORF58492 - 0.37 10.7 1.0 0.75 9.7 1.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) COPIIcoated_ERV PF07970.12 ORF55508 - 5.7e-22 78.7 0.7 8.8e-22 78.0 0.7 1.2 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter ERGIC_N PF13850.6 ORF55508 - 1.2e-20 73.6 0.7 1.2e-20 73.6 0.7 2.1 2 0 0 2 2 2 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DOG1 PF14144.6 ORF55168 - 0.077 13.2 0.0 0.19 12.0 0.0 1.7 1 0 0 1 1 1 0 Seed dormancy control H_PPase PF03030.16 ORF54654 - 6.7e-83 279.4 10.4 8e-83 279.2 10.4 1.1 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase DUF4231 PF14015.6 ORF54654 - 0.017 15.6 2.2 0.16 12.5 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) DUF3176 PF11374.8 ORF54654 - 0.14 12.4 2.1 10 6.4 1.7 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3176) YtpI PF14007.6 ORF54654 - 1.6 9.0 15.6 0.056 13.6 3.9 3.1 2 1 1 3 3 3 0 YtpI-like protein RNase_P_p30 PF01876.16 ORF54339 - 1.1e-34 119.8 0.4 1.7e-34 119.2 0.4 1.3 1 0 0 1 1 1 1 RNase P subunit p30 cNMP_binding PF00027.29 ORF5163 - 0.00023 21.2 0.0 0.00037 20.5 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Lig_chan PF00060.26 ORF5163 - 0.0047 16.8 2.5 0.0082 16.0 2.1 1.5 1 1 0 1 1 1 1 Ligand-gated ion channel NLRC4_HD PF17889.1 ORF5163 - 0.05 13.9 0.1 0.15 12.4 0.0 1.9 2 0 0 2 2 2 0 NLRC4 helical domain IZUMO PF15005.6 ORF5163 - 0.089 13.3 0.4 0.2 12.2 0.4 1.5 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated MAD PF05557.13 ORF50758 - 0.0014 17.1 19.7 0.0014 17.1 19.7 2.3 1 1 1 2 2 2 1 Mitotic checkpoint protein DUF724 PF05266.14 ORF50758 - 0.0076 16.1 21.4 0.055 13.3 13.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF724) Phage_lysis PF03245.13 ORF50758 - 0.033 14.3 0.7 0.033 14.3 0.7 3.0 2 1 0 2 2 2 0 Bacteriophage Rz lysis protein Filament PF00038.21 ORF50758 - 0.055 13.1 31.6 0.085 12.4 31.6 1.2 1 0 0 1 1 1 0 Intermediate filament protein GAS PF13851.6 ORF50758 - 0.078 12.3 33.4 0.028 13.8 20.2 2.3 1 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding YabA PF06156.13 ORF50758 - 0.083 13.5 27.1 0.49 11.1 3.2 3.3 1 1 2 3 3 3 0 Initiation control protein YabA ADIP PF11559.8 ORF50758 - 0.18 11.8 38.1 0.42 10.7 16.0 3.1 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding TMPIT PF07851.13 ORF50758 - 0.24 10.6 15.2 1 8.6 7.7 2.1 2 0 0 2 2 2 0 TMPIT-like protein ApoO PF09769.9 ORF50758 - 0.33 10.9 0.1 0.33 10.9 0.1 2.7 2 1 0 2 2 2 0 Apolipoprotein O PEPCK_N PF17297.2 ORF50758 - 0.35 10.4 0.9 0.56 9.8 0.9 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase N-terminal domain HMMR_C PF15908.5 ORF50758 - 0.49 10.7 26.0 0.97 9.7 5.9 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal DUF4617 PF15395.6 ORF50758 - 0.74 8.0 16.6 0.93 7.7 16.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4617) KASH_CCD PF14662.6 ORF50758 - 1.2 8.9 36.8 1.3 8.8 4.7 2.3 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF1664 PF07889.12 ORF50758 - 2.4 8.2 18.3 0.44 10.6 1.4 3.0 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Fez1 PF06818.15 ORF50758 - 4.5 7.7 34.9 9.6 6.6 22.3 2.1 1 1 1 2 2 2 0 Fez1 DUF3584 PF12128.8 ORF50758 - 4.8 4.6 34.3 6.8 4.1 34.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) HMMR_N PF15905.5 ORF50758 - 5.6 6.3 37.4 29 4.0 37.4 2.0 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Speriolin_N PF15058.6 ORF50758 - 7.9 6.5 7.6 0.43 10.6 0.4 2.3 2 1 1 3 3 3 0 Speriolin N terminus Spectrin PF00435.21 ORF50758 - 7.9 7.0 27.9 0.98 9.9 7.6 3.4 2 1 1 3 3 3 0 Spectrin repeat IBR PF01485.21 ORF3605 - 0.011 16.0 14.1 0.011 16.0 14.1 4.0 3 3 0 3 3 3 0 IBR domain, a half RING-finger domain TTL PF03133.15 ORF34697 - 2.5e-46 158.1 0.7 2.5e-46 158.1 0.7 2.0 2 1 0 2 2 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF34697 - 1.1e-06 28.1 0.0 2.4e-06 27.0 0.0 1.5 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF34697 - 0.01 15.1 0.0 0.016 14.5 0.0 1.3 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp Hid1 PF12722.7 ORF34697 - 0.1 10.7 10.4 0.13 10.4 10.4 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Paf1 PF03985.13 ORF34697 - 0.15 11.1 27.8 0.21 10.5 27.8 1.2 1 0 0 1 1 1 0 Paf1 DUF5525 PF17663.1 ORF34697 - 0.6 8.1 4.6 0.77 7.8 4.6 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5525) RR_TM4-6 PF06459.12 ORF34697 - 2.6 7.8 19.8 4.2 7.1 19.8 1.4 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 DUF4746 PF15928.5 ORF34697 - 3.3 7.1 23.1 5.1 6.4 23.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) BUD22 PF09073.10 ORF34697 - 3.5 6.8 34.5 4.7 6.4 34.5 1.2 1 0 0 1 1 1 0 BUD22 SDA1 PF05285.12 ORF34697 - 6 6.2 47.1 8.5 5.7 47.1 1.2 1 0 0 1 1 1 0 SDA1 Zip PF02535.22 ORF34697 - 9.6 5.3 13.6 14 4.8 13.6 1.4 1 0 0 1 1 1 0 ZIP Zinc transporter Na_H_antiporter PF03553.14 ORF33049 - 4e-26 91.9 10.1 6.1e-26 91.4 10.1 1.2 1 0 0 1 1 1 1 Na+/H+ antiporter family Wzy_C PF04932.15 ORF33049 - 0.67 9.6 3.7 0.81 9.3 0.0 2.1 2 0 0 2 2 2 0 O-Antigen ligase MORN PF02493.20 ORF3180 - 0.00092 19.0 0.1 0.00092 19.0 0.1 2.8 4 0 0 4 4 4 1 MORN repeat IBD PF10416.9 ORF3180 - 0.0018 18.3 1.1 0.0055 16.7 1.1 1.8 1 0 0 1 1 1 1 Transcription-initiator DNA-binding domain IBD ACP PF06857.11 ORF3180 - 0.7 10.2 2.8 1.3 9.3 0.6 2.4 2 0 0 2 2 2 0 Malonate decarboxylase delta subunit (MdcD) DUF1803 PF08820.10 ORF3180 - 2.6 8.1 8.3 21 5.3 8.1 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1803) ZapB PF06005.12 ORF30260 - 0.041 14.3 2.1 0.041 14.3 2.1 4.7 4 2 0 4 4 4 0 Cell division protein ZapB Tho2 PF11262.8 ORF30260 - 0.69 9.1 31.5 1.1 8.4 2.8 3.3 2 2 1 3 3 3 0 Transcription factor/nuclear export subunit protein 2 Lipase_3 PF01764.25 ORF30029 - 1.4e-31 109.3 0.0 2.2e-31 108.6 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF30029 - 0.0047 16.2 0.0 0.0077 15.5 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Cutinase PF01083.22 ORF30029 - 0.01 15.8 0.4 0.032 14.2 0.4 1.8 1 1 0 1 1 1 0 Cutinase Abhydrolase_2 PF02230.16 ORF30029 - 0.071 12.9 0.0 0.47 10.2 0.0 2.1 1 1 0 2 2 2 0 Phospholipase/Carboxylesterase TMEM154 PF15102.6 ORF29829 - 0.011 15.6 0.2 0.021 14.7 0.2 1.4 1 0 0 1 1 1 0 TMEM154 protein family Pkinase PF00069.25 ORF24866 - 2e-43 148.6 0.3 3.6e-43 147.8 0.3 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24866 - 1.2e-30 106.7 0.0 1.5e-30 106.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF24866 - 2.1e-09 37.0 0.0 3.5e-09 36.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF24866 - 0.00033 20.6 0.0 0.0011 19.0 0.0 1.7 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF24866 - 0.00034 19.5 0.0 0.00075 18.4 0.0 1.5 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF24866 - 0.00042 19.4 0.6 0.0023 16.9 0.6 2.0 1 1 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF24866 - 0.0018 17.7 0.0 0.0038 16.6 0.0 1.6 1 1 0 1 1 1 1 Kinase-like Choline_kinase PF01633.20 ORF24866 - 0.0021 17.7 0.1 0.0056 16.3 0.1 1.6 1 1 1 2 2 2 1 Choline/ethanolamine kinase RIO1 PF01163.22 ORF24866 - 0.0053 16.4 1.9 0.011 15.3 0.0 2.2 2 1 0 3 3 3 1 RIO1 family FTA2 PF13095.6 ORF24866 - 0.02 14.5 0.0 0.033 13.8 0.0 1.3 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 zf-RING_2 PF13639.6 ORF150794 - 2e-07 31.2 13.1 4.6e-07 30.1 13.1 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF150794 - 0.0011 18.9 5.4 0.0011 18.9 5.4 2.0 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF150794 - 0.0019 18.0 13.6 0.0041 16.9 13.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF150794 - 0.0028 17.9 13.4 0.0079 16.5 13.4 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF150794 - 0.0028 17.5 11.8 0.0059 16.4 11.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF150794 - 0.32 11.1 9.0 0.76 9.9 9.0 1.6 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF150794 - 0.43 10.8 11.7 13 6.0 11.7 2.4 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_5 PF14634.6 ORF150794 - 0.79 9.7 11.3 1.7 8.6 11.3 1.6 1 0 0 1 1 1 0 zinc-RING finger domain RINGv PF12906.7 ORF150794 - 2.1 8.6 13.9 4.2 7.6 13.9 1.6 1 0 0 1 1 1 0 RING-variant domain zf-RING_11 PF17123.5 ORF150794 - 4.8 7.0 16.2 0.87 9.4 11.4 2.3 2 0 0 2 2 2 0 RING-like zinc finger CTU2 PF10288.9 ORF150794 - 7.1 6.9 9.3 1e+02 3.2 9.3 2.2 1 1 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Carb_anhydrase PF00194.21 ORF146839 - 6.7e-31 107.7 0.9 1e-30 107.2 0.9 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMEM154 PF15102.6 ORF146839 - 0.0038 17.1 0.0 0.0096 15.8 0.0 1.6 1 0 0 1 1 1 1 TMEM154 protein family 7TM_GPCR_Srh PF10318.9 ORF146839 - 0.014 14.4 0.0 0.025 13.6 0.0 1.3 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh TMEM52 PF14979.6 ORF146839 - 0.074 13.0 0.4 0.16 11.9 0.4 1.6 1 0 0 1 1 1 0 Transmembrane 52 ERGIC_N PF13850.6 ORF145008 - 9.7e-22 77.1 1.3 9.7e-22 77.1 1.3 1.9 2 0 0 2 2 2 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) COPIIcoated_ERV PF07970.12 ORF145008 - 9.5e-19 68.1 0.2 1.6e-18 67.4 0.2 1.4 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter ASL_C PF08328.11 ORF139642 - 0.0071 16.4 0.1 0.26 11.4 0.0 2.6 2 0 0 2 2 2 2 Adenylosuccinate lyase C-terminal RNA_pol_L PF01193.24 ORF136934 - 2.5e-24 84.5 0.0 4.1e-24 83.8 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_A_CTD PF03118.15 ORF136934 - 4.5e-24 84.0 0.1 8e-24 83.2 0.1 1.4 1 0 0 1 1 1 1 Bacterial RNA polymerase, alpha chain C terminal domain RNA_pol_A_bac PF01000.26 ORF136934 - 7.8e-24 84.2 0.2 1.8e-23 83.0 0.1 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L_2 PF13656.6 ORF136934 - 0.00011 21.8 0.0 0.61 9.9 0.0 2.7 2 0 0 2 2 2 2 RNA polymerase Rpb3/Rpb11 dimerisation domain YjbH PF06082.11 ORF136934 - 0.25 10.1 0.1 0.37 9.5 0.1 1.2 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH Toxin_19 PF08088.12 ORF136266 - 7 6.9 13.1 2.7 8.2 9.3 2.4 2 0 0 2 2 2 0 Conotoxin I-superfamily ArsA_ATPase PF02374.15 ORF133565 - 4.1e-110 367.7 0.9 4.7e-110 367.5 0.9 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.6 ORF133565 - 8e-12 45.4 0.1 3.3e-11 43.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain CbiA PF01656.23 ORF133565 - 2.9e-08 33.8 0.0 5.3e-08 33.0 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 ORF133565 - 0.00016 21.2 1.0 0.012 15.1 0.2 2.3 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 ORF133565 - 0.00036 20.1 0.0 0.00078 19.0 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NB-ARC PF00931.22 ORF133565 - 0.00075 18.8 0.4 0.0015 17.8 0.1 1.6 2 0 0 2 2 2 1 NB-ARC domain SRP54 PF00448.22 ORF133565 - 0.0014 18.3 0.0 0.042 13.5 0.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain CBP_BcsQ PF06564.12 ORF133565 - 0.0015 18.0 0.0 0.0032 17.0 0.0 1.5 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Zeta_toxin PF06414.12 ORF133565 - 0.0055 16.0 0.0 0.012 14.9 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin AAA_18 PF13238.6 ORF133565 - 0.09 13.3 0.0 0.21 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 ORF133565 - 0.1 12.1 0.0 0.25 10.8 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein AAA_25 PF13481.6 ORF133565 - 0.36 10.4 1.0 1.5 8.4 1.0 1.9 1 1 0 1 1 1 0 AAA domain EFP PF01132.20 ORF131005 - 0.035 14.1 0.6 0.035 14.1 0.6 1.9 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain Sel_put PF04328.13 ORF131005 - 0.093 12.8 0.1 22 5.2 0.0 2.5 2 0 0 2 2 2 0 Selenoprotein, putative SLBP_RNA_bind PF15247.6 ORF131005 - 1.1 9.4 4.4 12 6.1 0.0 3.3 3 1 0 3 3 3 0 Histone RNA hairpin-binding protein RNA-binding domain Homeodomain PF00046.29 ORF128387 - 0.0044 16.8 2.2 0.0044 16.8 2.2 2.0 2 0 0 2 2 2 1 Homeodomain GFA PF04828.14 ORF127303 - 4.3e-09 36.6 5.6 1.7e-06 28.3 2.6 2.5 2 0 0 2 2 2 2 Glutathione-dependent formaldehyde-activating enzyme Insulin_TMD PF17870.1 ORF126399 - 0.051 13.6 0.1 0.12 12.4 0.1 1.6 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment TMEM154 PF15102.6 ORF126399 - 0.06 13.3 0.0 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 TMEM154 protein family RNA_pol_Rpb8 PF03870.15 ORF126399 - 0.064 13.4 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase Rpb8 DUF2312 PF10073.9 ORF126399 - 0.2 11.4 0.0 0.35 10.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2312) SlyX PF04102.12 ORF123349 - 0.019 15.6 1.2 0.019 15.6 1.2 2.3 3 0 0 3 3 3 0 SlyX FERM_M PF00373.18 ORF123349 - 0.12 12.7 0.2 0.2 12.1 0.2 1.3 1 0 0 1 1 1 0 FERM central domain Rootletin PF15035.6 ORF123349 - 0.55 10.2 4.9 0.064 13.3 0.7 1.6 2 0 0 2 2 2 0 Ciliary rootlet component, centrosome cohesion Csm1_N PF18504.1 ORF123349 - 0.84 10.0 4.3 2 8.8 4.3 1.6 1 0 0 1 1 1 0 Csm1 N-terminal domain Sec2p PF06428.11 ORF123349 - 1 9.4 6.1 0.55 10.2 3.8 1.7 2 0 0 2 2 2 0 GDP/GTP exchange factor Sec2p Homeodomain PF00046.29 ORF12154 - 0.0044 16.8 2.2 0.0044 16.8 2.2 2.0 2 0 0 2 2 2 1 Homeodomain MORN PF02493.20 ORF120180 - 0.00092 19.0 0.1 0.00092 19.0 0.1 2.8 4 0 0 4 4 4 1 MORN repeat EF-hand_7 PF13499.6 ORF109193 - 5.8e-07 29.9 0.5 0.00021 21.7 0.1 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF109193 - 3.8e-06 26.0 0.0 0.0078 15.7 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF109193 - 4.9e-06 26.1 0.1 0.027 14.4 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF109193 - 0.00015 21.1 0.0 0.016 14.7 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF109193 - 0.064 13.1 0.0 2.2 8.2 0.0 2.6 2 0 0 2 2 2 0 EF-hand domain pair DUF5023 PF16426.5 ORF108379 - 0.024 14.3 0.1 0.037 13.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5023) VanZ PF04892.12 ORF108379 - 0.075 13.7 0.0 0.15 12.7 0.0 1.5 1 0 0 1 1 1 0 VanZ like family IBR PF01485.21 ORF108204 - 0.011 16.0 14.1 0.011 16.0 14.1 4.0 3 3 0 3 3 3 0 IBR domain, a half RING-finger domain PUF PF00806.19 ORF10713 - 5.8e-14 50.9 0.0 0.055 13.2 0.0 5.3 5 0 0 5 5 5 5 Pumilio-family RNA binding repeat CPL PF08144.11 ORF10713 - 0.0011 19.4 0.0 0.0045 17.3 0.0 2.0 1 1 1 2 2 2 1 CPL (NUC119) domain DUF5023 PF16426.5 ORF103020 - 0.024 14.3 0.1 0.037 13.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5023) VanZ PF04892.12 ORF103020 - 0.075 13.7 0.0 0.15 12.7 0.0 1.5 1 0 0 1 1 1 0 VanZ like family MFS_1 PF07690.16 ORF101904 - 3.1e-13 49.4 18.7 3.1e-13 49.4 18.7 2.7 2 1 0 2 2 2 1 Major Facilitator Superfamily Herpes_US9 PF06072.11 ORF101904 - 0.068 13.1 1.0 1.5 8.8 0.1 2.7 2 0 0 2 2 2 0 Alphaherpesvirus tegument protein US9 OATP PF03137.20 ORF101904 - 0.73 8.0 11.7 0.015 13.7 3.3 2.3 3 0 0 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family DUF3784 PF12650.7 ORF101904 - 1.1 9.5 0.0 1.1 9.5 0.0 3.9 3 1 2 5 5 5 0 Domain of unknown function (DUF3784) DUF2931 PF11153.8 NODE_19880_length_985_cov_337.809474_g15227_i0forward_frame_3 - 0.095 12.4 0.1 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) Laminin_G_3 PF13385.6 NODE_19869_length_986_cov_5.465825_g15220_i0reverse_frame_2 - 1.2e-06 28.7 0.9 2.3e-06 27.9 0.9 1.4 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Doppel PF11466.8 NODE_19869_length_986_cov_5.465825_g15220_i0reverse_frame_2 - 0.26 11.0 1.3 0.46 10.2 1.3 1.4 1 0 0 1 1 1 0 Prion-like protein Doppel FHA PF00498.26 NODE_19818_length_987_cov_386.400210_g12746_i1reverse_frame_3 - 5.2e-20 71.6 0.1 7.2e-09 35.9 0.0 2.6 2 0 0 2 2 2 2 FHA domain Yop-YscD_cpl PF16697.5 NODE_19818_length_987_cov_386.400210_g12746_i1reverse_frame_3 - 1.7e-09 37.8 0.0 1.5e-05 25.2 0.0 2.9 3 0 0 3 3 3 2 Inner membrane component of T3SS, cytoplasmic domain Mre11_DNA_bind PF04152.14 ORF90123 - 4.6e-19 69.4 0.6 8.4e-19 68.5 0.6 1.5 1 0 0 1 1 1 1 Mre11 DNA-binding presumed domain Metallophos PF00149.28 ORF90123 - 0.0096 16.4 0.6 0.017 15.7 0.6 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PP2C PF00481.21 ORF8903 - 3.7e-71 239.8 0.1 2.4e-69 233.9 0.1 2.0 1 1 0 1 1 1 1 Protein phosphatase 2C Crp PF00325.20 ORF8903 - 0.015 14.9 0.1 9.5 6.0 0.2 3.2 3 0 0 3 3 3 0 Bacterial regulatory proteins, crp family CP2 PF04516.15 ORF84192 - 0.11 11.7 0.1 0.18 11.0 0.1 1.2 1 0 0 1 1 1 0 CP2 transcription factor LAT PF15234.6 ORF84192 - 0.11 12.2 2.6 0.21 11.3 2.6 1.4 1 0 0 1 1 1 0 Linker for activation of T-cells Sigma_reg_N PF13800.6 ORF81445 - 3.5 8.0 8.2 2.3 8.5 0.1 3.6 3 1 1 4 4 4 0 Sigma factor regulator N-terminal 2OG-FeII_Oxy PF03171.20 ORF73765 - 0.021 15.3 0.0 0.041 14.4 0.0 1.5 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily DUF4686 PF15742.5 ORF73651 - 0.018 14.2 19.1 0.026 13.7 19.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4686) GIT_CC PF16559.5 ORF73651 - 0.91 9.4 8.0 0.55 10.1 1.1 2.6 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor Phage_Gp23 PF10669.9 ORF73651 - 4.1 7.8 10.1 8.3 6.8 10.1 1.5 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) EssA PF10661.9 ORF73651 - 10 6.0 10.1 25 4.7 5.1 2.5 1 1 1 2 2 2 0 WXG100 protein secretion system (Wss), protein EssA Exo_endo_phos PF03372.23 ORF69486 - 2.9e-05 23.7 0.1 5e-05 22.9 0.1 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family NSP10 PF09401.10 ORF68526 - 0.047 13.7 0.1 0.079 13.0 0.1 1.3 1 0 0 1 1 1 0 RNA synthesis protein NSP10 PP2C PF00481.21 ORF60508 - 3.3e-39 135.1 0.0 5.8e-39 134.3 0.0 1.4 1 1 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF60508 - 0.0078 15.9 0.0 0.018 14.7 0.0 1.7 1 1 0 1 1 1 1 Protein phosphatase 2C HTH_34 PF13601.6 ORF60508 - 0.12 12.6 0.1 0.26 11.5 0.1 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain Apolipoprotein PF01442.18 ORF6013 - 0.15 11.9 3.1 2.3 8.0 0.3 2.1 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Z1 PF10593.9 ORF6013 - 1.9 7.9 9.0 0.8 9.2 4.0 2.1 2 0 0 2 2 2 0 Z1 domain DUF4586 PF15239.6 ORF56571 - 5e-31 109.0 22.0 6.5e-31 108.6 22.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4586) YqfQ PF14181.6 ORF54965 - 0.026 14.8 0.1 0.048 13.9 0.1 1.4 1 0 0 1 1 1 0 YqfQ-like protein Aconitase_C PF00694.19 ORF46004 - 6.9e-52 175.2 0.0 1.2e-51 174.4 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain PPR_3 PF13812.6 ORF37338 - 2.4e-10 40.4 0.0 3.9e-05 23.6 0.0 3.5 2 1 2 4 4 4 4 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF37338 - 0.00023 21.3 0.0 0.091 13.0 0.0 2.7 2 0 0 2 2 2 2 PPR repeat family PPR_long PF17177.4 ORF37338 - 0.014 14.8 0.0 0.031 13.7 0.0 1.5 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF37338 - 0.089 12.5 0.1 0.2 11.4 0.1 1.7 1 0 0 1 1 1 0 PPR repeat TPR_14 PF13428.6 ORF37338 - 0.32 11.9 3.3 0.68 10.9 0.2 2.9 1 1 2 3 3 3 0 Tetratricopeptide repeat Arfaptin PF06456.13 ORF22586 - 0.039 13.5 0.9 0.055 13.0 0.9 1.1 1 0 0 1 1 1 0 Arfaptin-like domain PP2C PF00481.21 ORF22220 - 3.7e-71 239.8 0.1 2.4e-69 233.9 0.1 2.0 1 1 0 1 1 1 1 Protein phosphatase 2C Crp PF00325.20 ORF22220 - 0.015 14.9 0.1 9.5 6.0 0.2 3.2 3 0 0 3 3 3 0 Bacterial regulatory proteins, crp family DUF179 PF02622.15 ORF21518 - 2.5e-07 30.8 0.0 6.1e-07 29.5 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized ACR, COG1678 PTH2 PF01981.16 ORF21518 - 0.012 15.8 0.0 0.019 15.2 0.0 1.3 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase PTH2 PARG_cat PF05028.14 ORF19680 - 8.7e-81 271.8 0.0 1.1e-80 271.5 0.0 1.0 1 0 0 1 1 1 1 Poly (ADP-ribose) glycohydrolase (PARG) AKAP_110 PF05716.13 ORF19680 - 0.11 10.7 0.0 0.15 10.2 0.0 1.1 1 0 0 1 1 1 0 A-kinase anchor protein 110 kDa (AKAP 110) Bax1-I PF01027.20 ORF146938 - 2.3e-34 119.1 35.0 2.7e-34 118.8 35.0 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF146938 - 6.5e-08 32.4 3.9 7.5e-08 32.2 3.9 1.1 1 0 0 1 1 1 1 Bax inhibitor 1 like DUF2070 PF09843.9 ORF146938 - 1.3 7.2 23.5 1.8 6.8 23.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4191 PF13829.6 ORF146938 - 3.6 6.9 11.5 0.79 9.0 5.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) TRAP-gamma PF07074.12 ORF146938 - 8.1 6.0 11.1 0.42 10.1 4.1 2.2 1 1 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) PP2C PF00481.21 ORF144537 - 3.7e-71 239.8 0.1 2.4e-69 233.9 0.1 2.0 1 1 0 1 1 1 1 Protein phosphatase 2C Crp PF00325.20 ORF144537 - 0.015 14.9 0.1 9.5 6.0 0.2 3.2 3 0 0 3 3 3 0 Bacterial regulatory proteins, crp family TetR_C_21 PF17926.1 ORF138653 - 0.11 12.6 0.1 0.39 10.9 0.1 1.9 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PSI PF01437.25 ORF131192 - 2.5e-07 31.1 62.0 0.00046 20.7 6.6 5.2 4 1 1 5 5 5 4 Plexin repeat Apq12 PF12716.7 ORF131192 - 0.17 11.9 2.6 0.24 11.4 2.6 1.2 1 0 0 1 1 1 0 Nuclear pore assembly and biogenesis PSI_integrin PF17205.3 ORF131192 - 6.1 6.7 54.9 0.038 13.7 6.8 5.2 5 1 0 5 5 5 0 Integrin plexin domain Sigma_reg_N PF13800.6 ORF126279 - 3.5 8.0 8.2 2.3 8.5 0.1 3.6 3 1 1 4 4 4 0 Sigma factor regulator N-terminal DUF3328 PF11807.8 ORF124996 - 0.13 12.0 1.4 0.39 10.4 1.4 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3328) Topoisom_bac PF01131.20 ORF123938 - 8.3e-23 81.1 0.0 1.3e-22 80.4 0.0 1.3 1 0 0 1 1 1 1 DNA topoisomerase zf-H2C2_2 PF13465.6 ORF123938 - 2.3 8.8 6.5 8.9 6.9 0.6 3.2 3 0 0 3 3 3 0 Zinc-finger double domain AI-2E_transport PF01594.16 ORF123857 - 1.9e-11 43.7 5.7 3.5e-11 42.8 5.7 1.4 1 0 0 1 1 1 1 AI-2E family transporter Bax1-I PF01027.20 ORF109183 - 2.3e-34 119.1 35.0 2.7e-34 118.8 35.0 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF109183 - 6.5e-08 32.4 3.9 7.5e-08 32.2 3.9 1.1 1 0 0 1 1 1 1 Bax inhibitor 1 like DUF2070 PF09843.9 ORF109183 - 1.3 7.2 23.5 1.8 6.8 23.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF4191 PF13829.6 ORF109183 - 3.6 6.9 11.5 0.79 9.0 5.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) TRAP-gamma PF07074.12 ORF109183 - 8.1 6.0 11.1 0.42 10.1 4.1 2.2 1 1 0 2 2 2 0 Translocon-associated protein, gamma subunit (TRAP-gamma) LpxK PF02606.14 ORF103462 - 7e-112 373.7 0.0 8.6e-112 373.4 0.0 1.0 1 0 0 1 1 1 1 Tetraacyldisaccharide-1-P 4'-kinase MobB PF03205.14 ORF103462 - 0.0078 16.1 0.0 0.03 14.2 0.0 2.0 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Glyco_transf_4 PF13439.6 ORF103462 - 0.0087 16.1 0.1 0.016 15.2 0.1 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 AAA_26 PF13500.6 ORF103462 - 0.012 15.4 0.1 0.031 14.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain CbiA PF01656.23 ORF103462 - 0.11 12.5 0.0 0.23 11.5 0.0 1.5 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain Pkinase PF00069.25 ORF100072 - 4.8e-27 95.0 0.0 8e-27 94.3 0.0 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF100072 - 1.3e-16 60.7 0.0 3.8e-16 59.2 0.0 1.6 1 1 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF100072 - 2.3e-08 33.3 0.0 3.2e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF100072 - 8.4e-05 22.6 0.0 0.00044 20.3 0.0 2.0 1 1 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF100072 - 0.011 15.1 0.0 0.02 14.2 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DNA_pol_A_exo1 PF01612.20 ORF91858 - 2.4e-18 66.5 0.2 4.5e-18 65.6 0.2 1.4 1 0 0 1 1 1 1 3'-5' exonuclease Peptidase_C1 PF00112.23 ORF88450 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF88450 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF88450 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family HECT PF00632.25 ORF82883 - 8.1e-56 189.7 0.1 9.7e-56 189.5 0.1 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Peptidase_C1 PF00112.23 ORF79117 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF79117 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF79117 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF7797 - 2.1e-57 194.7 6.4 2.1e-57 194.7 6.4 1.7 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF7797 - 1.4e-13 51.0 5.9 3.1e-13 49.9 5.9 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF7797 - 8.5e-06 24.8 1.3 0.0024 16.7 1.2 2.2 2 0 0 2 2 2 2 Peptidase C1-like family FDF PF09532.10 ORF72639 - 1.6e-09 38.6 3.4 0.00011 23.0 0.0 2.6 1 1 1 2 2 2 2 FDF domain zf_UBZ PF18439.1 ORF70419 - 0.091 12.4 1.0 0.35 10.5 0.4 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 ORF70419 - 1.1 9.5 7.8 1.4 9.1 2.7 2.9 2 0 0 2 2 2 0 Zinc ribbon domain Peptidase_C1 PF00112.23 ORF6605 - 7.7e-57 192.9 9.5 7.7e-57 192.9 9.5 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF6605 - 1.6e-14 54.0 3.0 3.6e-14 52.9 3.0 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF6605 - 1.3e-06 27.5 1.5 0.0028 16.5 0.6 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Propeptide_C1 PF08127.13 ORF6605 - 0.069 13.1 0.1 0.23 11.4 0.0 1.8 2 0 0 2 2 2 0 Peptidase family C1 propeptide Carb_anhydrase PF00194.21 ORF65680 - 1.6e-32 113.0 1.4 2.5e-32 112.4 1.4 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase PRIMA1 PF16101.5 ORF65680 - 0.052 13.6 0.2 0.12 12.5 0.2 1.5 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 DAG1 PF05454.11 ORF65680 - 0.053 12.9 0.0 0.088 12.2 0.0 1.3 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) Kelch_1 PF01344.25 ORF65611 - 1.1e-58 194.5 0.0 2.9e-12 46.0 0.0 7.5 7 1 0 7 7 7 7 Kelch motif Kelch_6 PF13964.6 ORF65611 - 7e-36 121.4 0.0 3.8e-07 30.1 0.0 7.4 2 2 5 7 7 7 6 Kelch motif Kelch_2 PF07646.15 ORF65611 - 1.5e-28 97.6 0.1 5.2e-06 26.2 0.0 6.8 7 1 0 7 7 7 6 Kelch motif Kelch_3 PF13415.6 ORF65611 - 8.9e-27 92.8 2.7 0.00013 22.1 0.0 7.3 7 0 0 7 7 7 6 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF65611 - 3.6e-11 42.9 0.0 0.12 12.4 0.0 6.1 6 1 1 7 7 7 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF65611 - 1.5e-08 34.5 0.0 2.9 8.0 0.0 5.4 5 0 0 5 5 5 3 Kelch motif NiFeSe_Hases PF00374.19 ORF64996 - 4.7e-106 355.7 0.0 5.2e-106 355.5 0.0 1.0 1 0 0 1 1 1 1 Nickel-dependent hydrogenase Glyco_hydro_38C PF07748.13 ORF64917 - 3.3e-16 60.0 0.0 6.5e-16 59.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Tantalus PF15386.6 ORF64917 - 0.14 12.3 3.3 0.65 10.1 0.2 2.6 2 0 0 2 2 2 0 Drosophila Tantalus-like IBR PF01485.21 ORF63047 - 0.0004 20.6 8.2 0.0004 20.6 8.2 4.3 3 1 0 3 3 3 2 IBR domain, a half RING-finger domain EF-hand_1 PF00036.32 ORF62901 - 2.7e-15 54.7 8.2 2.9e-06 26.4 0.7 3.8 3 0 0 3 3 3 3 EF hand EF-hand_6 PF13405.6 ORF62901 - 1.5e-12 46.4 7.6 0.0003 20.5 0.3 4.4 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF62901 - 2.4e-12 47.1 8.4 1e-06 29.1 1.7 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF62901 - 4.3e-11 41.8 9.4 9.3e-05 21.8 0.6 3.5 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF62901 - 2.8e-08 33.5 8.8 0.00097 18.9 0.8 3.5 3 1 1 4 4 4 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF62901 - 0.00053 20.3 0.5 0.076 13.3 0.0 2.4 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF62901 - 0.0059 16.6 0.1 3.1 7.7 0.0 3.0 3 0 0 3 3 3 2 Caleosin related protein EF-hand_4 PF12763.7 ORF62901 - 0.063 13.2 5.5 3.1 7.8 0.6 3.2 1 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand Pkinase PF00069.25 ORF5733 - 1.1e-63 215.1 0.8 1.3e-63 214.9 0.8 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF5733 - 3.1e-27 95.5 0.1 7.5e-27 94.2 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF5733 - 4.8e-05 23.4 0.0 0.0051 16.8 0.0 2.2 2 0 0 2 2 2 2 Phosphotransferase enzyme family ABC1 PF03109.16 ORF5733 - 0.0028 17.8 0.2 0.0069 16.5 0.1 1.7 1 1 0 1 1 1 1 ABC1 family Kdo PF06293.14 ORF5733 - 0.0078 15.6 0.0 0.012 14.9 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family PAH PF02671.21 ORF5733 - 0.023 14.8 0.1 0.33 11.1 0.0 2.7 2 1 0 2 2 2 0 Paired amphipathic helix repeat Peptidase_C1 PF00112.23 ORF56464 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF56464 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF56464 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family AAA_lid_2 PF17863.1 ORF51462 - 7.8e-19 67.3 0.0 1.3e-18 66.6 0.0 1.3 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 ORF51462 - 1.3e-10 41.0 0.0 2.3e-07 30.4 0.0 2.2 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 ORF51462 - 2.2e-06 27.7 0.0 0.0048 16.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) MCM PF00493.23 ORF51462 - 1.3e-05 24.5 0.0 0.0012 18.0 0.0 2.7 2 1 0 2 2 2 1 MCM P-loop domain AAA_22 PF13401.6 ORF51462 - 0.00015 22.1 0.0 0.0012 19.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 ORF51462 - 0.00049 19.8 0.0 0.21 11.3 0.0 2.2 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_16 PF13191.6 ORF51462 - 0.00093 19.6 0.0 0.003 17.9 0.0 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 ORF51462 - 0.0011 19.4 0.0 0.016 15.6 0.0 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 ORF51462 - 0.021 15.3 0.0 0.52 10.8 0.0 2.2 2 0 0 2 2 2 0 ABC transporter AAA_30 PF13604.6 ORF51462 - 0.023 14.4 0.1 0.32 10.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 ORF51462 - 0.024 15.2 0.0 0.088 13.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 ORF51462 - 0.025 14.9 0.0 0.33 11.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 ORF51462 - 0.028 14.2 0.0 0.066 13.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 ORF51462 - 0.039 14.2 0.0 0.17 12.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 ORF51462 - 0.077 12.2 0.0 0.19 10.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 ORF51462 - 0.083 12.4 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region Abhydrolase_3 PF07859.13 ORF45318 - 7.1e-22 78.3 0.0 9.7e-22 77.9 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF45318 - 0.00058 19.2 0.0 0.0071 15.6 0.0 2.1 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Say1_Mug180 PF10340.9 ORF45318 - 0.011 14.7 0.0 0.034 13.0 0.0 1.8 1 1 0 1 1 1 0 Steryl acetyl hydrolase N_formyltrans_C PF18216.1 ORF45318 - 0.12 12.1 0.1 2 8.1 0.0 2.5 2 0 0 2 2 2 0 N-formyltransferase dimerization C-terminal domain Esterase PF00756.20 ORF45318 - 0.12 12.0 0.0 5.1 6.7 0.0 2.2 2 0 0 2 2 2 0 Putative esterase Peripla_BP_3 PF13377.6 ORF44816 - 1.7e-40 139.1 0.0 2.6e-40 138.4 0.0 1.3 1 0 0 1 1 1 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF44816 - 1.5e-33 116.5 0.0 1.8e-33 116.2 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family LacI PF00356.21 ORF44816 - 2.2e-20 72.2 0.8 3.7e-20 71.4 0.8 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family Peripla_BP_4 PF13407.6 ORF44816 - 2e-18 66.9 0.0 3e-18 66.3 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain HTH_3 PF01381.22 ORF44816 - 0.074 13.1 0.0 0.2 11.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_Tnp_ISL3 PF13542.6 ORF44816 - 0.11 11.9 0.1 0.21 11.0 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_31 PF13560.6 ORF44816 - 0.11 12.8 0.0 0.23 11.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_35 PF13693.6 ORF44816 - 0.12 12.5 0.1 0.39 10.8 0.0 1.8 1 1 1 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_38 PF13936.6 ORF44816 - 0.17 11.7 0.0 0.99 9.2 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Phage_CI_repr PF07022.13 ORF44816 - 0.18 12.0 0.0 0.53 10.4 0.0 1.8 2 0 0 2 2 2 0 Bacteriophage CI repressor helix-turn-helix domain MYO10_CC PF16735.5 ORF44816 - 0.91 9.7 3.3 0.48 10.6 0.6 1.9 2 0 0 2 2 2 0 Unconventional myosin-X coiled coil domain RRM_1 PF00076.22 ORF40520 - 3.4e-31 106.9 0.1 2.5e-16 59.2 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF40520 - 1.4e-10 41.2 0.5 2.6e-05 24.2 0.0 3.2 3 1 0 3 3 3 2 RNA recognition motif OB_RNB PF08206.11 ORF40520 - 0.036 13.8 0.0 6.6 6.5 0.0 2.4 2 0 0 2 2 2 0 Ribonuclease B OB domain Nup35_RRM_2 PF14605.6 ORF40520 - 0.05 13.6 0.0 0.97 9.5 0.0 2.3 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif PHtD_u1 PF16645.5 ORF40520 - 5.6 7.5 6.1 19 5.8 2.6 2.5 1 1 1 2 2 2 0 Unstructured region on Pneumococcal histidine triad protein Peptidase_M14 PF00246.24 ORF39219 - 4.1e-20 72.8 0.0 3.5e-19 69.7 0.0 2.4 1 1 0 1 1 1 1 Zinc carboxypeptidase Arteri_GP4 PF02497.15 ORF39219 - 0.089 12.9 0.4 0.74 9.9 0.1 2.3 2 1 1 3 3 3 0 Arterivirus glycoprotein cNMP_binding PF00027.29 ORF39111 - 1.3e-05 25.2 0.0 2e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain FDF PF09532.10 ORF38432 - 1.6e-09 38.6 3.4 0.00011 23.0 0.0 2.6 1 1 1 2 2 2 2 FDF domain p450 PF00067.22 ORF35540 - 4.3e-66 223.6 0.0 4.9e-66 223.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 Endonuclease_5 PF04493.14 ORF35128 - 2.3e-64 216.7 0.0 4e-64 215.9 0.0 1.4 2 0 0 2 2 2 1 Endonuclease V DUF99 PF01949.16 ORF35128 - 0.0035 16.8 0.0 0.0061 16.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF99 DUF5093 PF17011.5 ORF35128 - 0.046 14.0 1.3 0.046 14.0 1.3 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5093) DUF755 PF05501.11 ORF35128 - 4.1 7.7 10.7 0.86 9.9 3.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF755) Peptidase_C1 PF00112.23 ORF34086 - 8.2e-61 205.9 10.5 1.3e-60 205.2 10.5 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF34086 - 1.3e-14 54.3 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF34086 - 0.14 10.9 1.6 2.5 6.8 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family HEAT_2 PF13646.6 ORF33548 - 0.00019 21.7 0.1 0.19 12.1 0.0 4.0 1 1 3 4 4 4 2 HEAT repeats HEAT PF02985.22 ORF33548 - 0.00024 21.1 0.0 3.2 8.3 0.0 5.0 6 0 0 6 6 6 1 HEAT repeat DCB PF16213.5 ORF33548 - 0.00054 19.7 0.0 0.004 16.8 0.0 2.1 1 1 0 2 2 2 1 Dimerisation and cyclophilin-binding domain of Mon2 Cnd1 PF12717.7 ORF33548 - 0.00086 19.4 5.8 0.2 11.7 0.2 3.3 1 1 2 3 3 3 2 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF33548 - 0.0018 18.9 2.2 0.3 11.7 0.0 3.9 2 2 2 4 4 4 1 Vacuolar 14 Fab1-binding region Tautomerase_2 PF14552.6 ORF33548 - 0.0068 16.5 0.0 0.02 15.0 0.0 1.9 1 0 0 1 1 1 1 Tautomerase enzyme MOR2-PAG1_N PF14222.6 ORF33548 - 0.0084 15.1 0.3 0.015 14.2 0.2 1.4 1 1 0 1 1 1 1 Cell morphogenesis N-terminal MOR2-PAG1_C PF14225.6 ORF33548 - 0.039 13.8 0.9 1.4 8.7 0.1 2.8 1 1 2 3 3 3 0 Cell morphogenesis C-terminal ParcG PF10274.9 ORF33548 - 0.067 13.3 0.8 0.2 11.8 0.2 2.1 2 1 0 2 2 2 0 Parkin co-regulated protein Colicin PF01024.19 ORF33548 - 0.19 11.6 1.9 1.9 8.4 0.1 2.2 2 0 0 2 2 2 0 Colicin pore forming domain Peptidase_C1 PF00112.23 ORF27484 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF27484 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF27484 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family CTNNBL PF08216.11 ORF26110 - 0.068 13.4 2.1 0.19 11.9 0.4 2.4 2 1 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear HEAT_2 PF13646.6 ORF23247 - 0.00019 21.7 0.1 0.19 12.1 0.0 4.0 1 1 3 4 4 4 2 HEAT repeats HEAT PF02985.22 ORF23247 - 0.00024 21.1 0.0 3.2 8.3 0.0 5.0 6 0 0 6 6 6 1 HEAT repeat DCB PF16213.5 ORF23247 - 0.00054 19.7 0.0 0.004 16.8 0.0 2.1 1 1 0 2 2 2 1 Dimerisation and cyclophilin-binding domain of Mon2 Cnd1 PF12717.7 ORF23247 - 0.00086 19.4 5.8 0.2 11.7 0.2 3.3 1 1 2 3 3 3 2 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF23247 - 0.0018 18.9 2.2 0.3 11.7 0.0 3.9 2 2 2 4 4 4 1 Vacuolar 14 Fab1-binding region Tautomerase_2 PF14552.6 ORF23247 - 0.0068 16.5 0.0 0.02 15.0 0.0 1.9 1 0 0 1 1 1 1 Tautomerase enzyme MOR2-PAG1_N PF14222.6 ORF23247 - 0.0084 15.1 0.3 0.015 14.2 0.2 1.4 1 1 0 1 1 1 1 Cell morphogenesis N-terminal MOR2-PAG1_C PF14225.6 ORF23247 - 0.039 13.8 0.9 1.4 8.7 0.1 2.8 1 1 2 3 3 3 0 Cell morphogenesis C-terminal ParcG PF10274.9 ORF23247 - 0.067 13.3 0.8 0.2 11.8 0.2 2.1 2 1 0 2 2 2 0 Parkin co-regulated protein Colicin PF01024.19 ORF23247 - 0.19 11.6 1.9 1.9 8.4 0.1 2.2 2 0 0 2 2 2 0 Colicin pore forming domain Peptidase_C1 PF00112.23 ORF22037 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF22037 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF22037 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family IBR PF01485.21 ORF19757 - 0.0004 20.6 8.2 0.0004 20.6 8.2 4.1 3 1 0 3 3 3 2 IBR domain, a half RING-finger domain Lipase_GDSL_3 PF14606.6 ORF18852 - 0.11 12.6 0.5 0.25 11.4 0.5 1.5 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family FGF PF00167.18 ORF18742 - 0.0047 17.0 0.1 0.085 13.0 0.0 2.2 1 1 1 2 2 2 2 Fibroblast growth factor Peptidase_C1 PF00112.23 ORF157 - 8.2e-61 205.9 10.5 1.3e-60 205.2 10.5 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF157 - 1.3e-14 54.3 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF157 - 0.14 10.9 1.6 2.5 6.8 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Pkinase PF00069.25 ORF149121 - 1.1e-56 192.1 0.4 1.3e-56 191.9 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF149121 - 4.7e-27 94.9 0.0 8.1e-27 94.1 0.0 1.3 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF149121 - 3.7e-06 26.5 0.0 5.6e-05 22.6 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF149121 - 4e-05 23.1 0.2 6.7e-05 22.3 0.2 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF149121 - 0.00042 19.4 0.2 0.00042 19.4 0.2 2.1 2 0 0 2 2 2 1 Haspin like kinase domain FTA2 PF13095.6 ORF149121 - 0.011 15.4 0.0 0.74 9.4 0.0 2.4 1 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 IBR PF01485.21 ORF146689 - 0.0004 20.6 8.2 0.0004 20.6 8.2 4.1 3 1 0 3 3 3 2 IBR domain, a half RING-finger domain Glyco_hydro_38C PF07748.13 ORF140444 - 3.3e-16 60.0 0.0 6.5e-16 59.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Tantalus PF15386.6 ORF140444 - 0.14 12.3 3.3 0.65 10.1 0.2 2.6 2 0 0 2 2 2 0 Drosophila Tantalus-like M20_dimer PF07687.14 ORF137077 - 0.064 13.2 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 Peptidase dimerisation domain Ureide_permease PF07168.11 ORF135961 - 0.77 8.5 2.0 9.4 4.9 0.1 2.2 2 0 0 2 2 2 0 Ureide permease Peptidase_C1 PF00112.23 ORF135181 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF135181 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF135181 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF127881 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF127881 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF127881 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF127266 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF127266 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF127266 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family RRM_1 PF00076.22 ORF117863 - 3.4e-31 106.9 0.1 2.5e-16 59.2 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF117863 - 1.4e-10 41.2 0.5 2.6e-05 24.2 0.0 3.2 3 1 0 3 3 3 2 RNA recognition motif OB_RNB PF08206.11 ORF117863 - 0.036 13.8 0.0 6.6 6.5 0.0 2.4 2 0 0 2 2 2 0 Ribonuclease B OB domain Nup35_RRM_2 PF14605.6 ORF117863 - 0.05 13.6 0.0 0.97 9.5 0.0 2.3 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif PHtD_u1 PF16645.5 ORF117863 - 5.6 7.5 6.1 19 5.8 2.6 2.5 1 1 1 2 2 2 0 Unstructured region on Pneumococcal histidine triad protein COesterase PF00135.28 ORF117713 - 1.2e-05 24.4 0.3 9.6e-05 21.4 0.3 1.9 1 1 0 1 1 1 1 Carboxylesterase family Peptidase_C1 PF00112.23 ORF115328 - 1.3e-59 201.9 11.7 2.1e-59 201.3 11.7 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF115328 - 1.3e-14 54.4 6.3 2.6e-14 53.4 6.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF115328 - 0.041 12.7 1.4 1.8 7.2 0.1 2.2 2 0 0 2 2 2 0 Peptidase C1-like family SAM_MT PF04445.13 ORF115019 - 2.3e-104 347.8 0.0 2.9e-104 347.6 0.0 1.1 1 0 0 1 1 1 1 Putative SAM-dependent methyltransferase TMEM234 PF10639.9 ORF114881 - 0.0019 18.2 2.0 0.0054 16.8 2.0 1.8 1 0 0 1 1 1 1 Putative transmembrane family 234 Peptidase_C1 PF00112.23 ORF113936 - 6.8e-57 193.0 11.6 1.1e-56 192.3 11.6 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF113936 - 8.4e-17 61.4 7.2 1.7e-16 60.4 7.2 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Glyco_hydro_11 PF00457.17 ORF109970 - 0.058 13.0 0.0 0.09 12.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 11 ERGIC_N PF13850.6 ORF108324 - 0.029 14.7 0.9 0.062 13.7 0.1 1.9 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ank_4 PF13637.6 ORF105208 - 1.1e-20 73.6 3.9 3.8e-06 27.3 0.1 5.1 3 2 2 5 5 5 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF105208 - 2.2e-20 73.0 1.8 9.4e-06 26.1 0.2 4.0 2 2 2 4 4 4 3 Ankyrin repeats (3 copies) Ank PF00023.30 ORF105208 - 4.8e-18 64.7 0.7 0.012 16.1 0.0 6.9 7 0 0 7 7 7 4 Ankyrin repeat Ank_3 PF13606.6 ORF105208 - 1.1e-14 53.1 1.2 0.14 12.8 0.0 7.5 9 0 0 9 9 9 3 Ankyrin repeat Ank_5 PF13857.6 ORF105208 - 2.4e-11 43.7 3.9 0.0011 19.2 0.2 4.4 3 2 2 5 5 5 4 Ankyrin repeats (many copies) PP2C PF00481.21 ORF103813 - 1.3e-65 221.6 0.2 4.4e-51 174.0 0.1 2.1 1 1 1 2 2 2 2 Protein phosphatase 2C SLATT_5 PF18160.1 ORF103813 - 0.0018 17.6 0.0 0.0027 17.1 0.0 1.3 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 5 PP2C_2 PF13672.6 ORF103813 - 0.0043 16.7 0.0 0.012 15.2 0.0 1.7 1 1 0 1 1 1 1 Protein phosphatase 2C ATP-synt_10 PF05176.14 ORF103813 - 0.033 13.4 0.0 0.05 12.8 0.0 1.2 1 0 0 1 1 1 0 ATP10 protein SpoIIE PF07228.12 ORF103813 - 0.071 13.0 0.0 8.6 6.2 0.0 2.3 2 0 0 2 2 2 0 Stage II sporulation protein E (SpoIIE) T2SSK PF03934.13 ORF102563 - 1.9e-66 224.3 3.4 2.3e-66 224.1 3.4 1.0 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein K MotA_ExbB PF01618.16 ORF100705 - 0.045 13.5 0.0 0.096 12.4 0.0 1.5 1 0 0 1 1 1 0 MotA/TolQ/ExbB proton channel family GvpG PF05120.12 ORF100705 - 0.085 12.9 0.6 0.19 11.8 0.6 1.6 1 0 0 1 1 1 0 Gas vesicle protein G ParcG PF10274.9 ORF98571 - 3e-81 271.9 0.0 4.7e-81 271.3 0.0 1.3 1 0 0 1 1 1 1 Parkin co-regulated protein DCB PF16213.5 ORF98571 - 0.0022 17.7 0.0 0.0045 16.7 0.0 1.5 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 UME PF08064.13 ORF98571 - 0.19 11.7 0.0 0.44 10.5 0.0 1.6 1 1 0 1 1 1 0 UME (NUC010) domain ABC_tran PF00005.27 ORF96779 - 8.2e-12 45.8 0.0 1.6e-11 44.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF96779 - 4.9e-08 33.1 0.0 8.9e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system efThoc1 PF11957.8 ORF96779 - 0.071 11.8 0.0 0.28 9.8 0.0 1.7 2 0 0 2 2 2 0 THO complex subunit 1 transcription elongation factor DUF463 PF04317.12 ORF96752 - 2.9e-120 402.2 0.0 3.2e-120 402.1 0.0 1.0 1 0 0 1 1 1 1 YcjX-like family, DUF463 TIP41 PF04176.13 ORF96635 - 1.6e-42 144.9 1.0 6.7e-42 142.9 1.0 1.8 1 1 0 1 1 1 1 TIP41-like family Pirin_C PF05726.13 ORF96153 - 8e-19 67.9 0.0 1.2e-18 67.4 0.0 1.3 1 0 0 1 1 1 1 Pirin C-terminal cupin domain Pirin PF02678.16 ORF96153 - 3.5e-18 65.6 0.2 5.5e-18 64.9 0.2 1.3 1 0 0 1 1 1 1 Pirin CaMKII_AD PF08332.10 ORF95638 - 0.14 12.3 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II association domain ArgJ PF01960.18 ORF92183 - 6.6e-84 281.8 1.5 7.5e-84 281.6 1.5 1.0 1 0 0 1 1 1 1 ArgJ family DUF1664 PF07889.12 ORF88100 - 0.0085 16.1 27.8 0.13 12.4 3.7 4.6 2 2 1 4 4 4 3 Protein of unknown function (DUF1664) DUF4795 PF16043.5 ORF88100 - 0.049 13.2 28.5 0.043 13.4 14.3 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF2203 PF09969.9 ORF88100 - 0.082 13.6 17.3 1.5 9.5 1.6 3.7 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) KxDL PF10241.9 ORF88100 - 0.16 12.3 14.4 8.6 6.7 0.1 4.6 3 1 1 4 4 4 0 Uncharacterized conserved protein Syntaxin_2 PF14523.6 ORF88100 - 0.72 10.3 29.5 5.1 7.5 5.5 4.2 2 1 2 4 4 4 0 Syntaxin-like protein ZnuA PF01297.17 ORF88100 - 0.87 8.9 6.0 1.2 8.5 0.2 2.8 2 1 1 3 3 3 0 Zinc-uptake complex component A periplasmic COG5 PF10392.9 ORF88100 - 0.89 9.7 14.6 3.1 8.0 0.2 4.3 1 1 3 4 4 4 0 Golgi transport complex subunit 5 Tweety PF04906.13 ORF88100 - 1.7 7.2 8.5 4.2 5.9 0.1 3.0 2 1 1 3 3 3 0 Tweety Occludin_ELL PF07303.13 ORF88100 - 1.8 9.3 18.5 1.3 9.8 1.1 4.7 1 1 4 5 5 5 0 Occludin homology domain COG2 PF06148.11 ORF88100 - 1.8 8.6 22.1 0.37 10.9 0.8 4.3 1 1 2 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF16 PF01519.16 ORF88100 - 2.5 8.7 34.8 2.2 8.8 5.0 4.9 1 1 2 3 3 2 0 Protein of unknown function DUF16 DUF4446 PF14584.6 ORF88100 - 3.8 7.5 24.0 0.75 9.8 1.8 4.4 1 1 1 4 4 4 0 Protein of unknown function (DUF4446) Spectrin PF00435.21 ORF88100 - 7.3 7.1 17.2 8.1 7.0 1.9 3.9 1 1 2 4 4 4 0 Spectrin repeat SNARE PF05739.19 ORF87783 - 0.063 13.3 0.2 0.063 13.3 0.2 1.6 2 0 0 2 2 2 0 SNARE domain Peptidase_C48 PF02902.19 ORF85408 - 0.0021 17.9 0.0 0.005 16.7 0.0 1.5 2 0 0 2 2 2 1 Ulp1 protease family, C-terminal catalytic domain FAM27 PF15832.5 ORF85408 - 0.048 14.2 0.4 0.087 13.4 0.4 1.3 1 0 0 1 1 1 0 FAM27 D and E protein family MFS_1 PF07690.16 ORF84256 - 5.5e-40 137.4 47.5 1.5e-37 129.4 23.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF84256 - 0.00034 19.6 18.7 0.00048 19.1 18.1 1.5 1 1 1 2 2 2 1 Sugar (and other) transporter MASE3 PF17159.4 ORF84256 - 0.021 14.5 0.3 0.021 14.5 0.3 2.6 3 0 0 3 3 3 0 Membrane-associated sensor domain Git3 PF11710.8 ORF84256 - 0.82 9.4 8.8 0.19 11.5 3.4 2.4 2 1 0 2 2 2 0 G protein-coupled glucose receptor regulating Gpa2 OATP PF03137.20 ORF84256 - 8.1 4.6 11.0 0.16 10.2 2.9 2.0 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family RCC1_2 PF13540.6 ORF83009 - 9e-11 41.3 20.8 0.045 13.6 1.0 6.9 7 0 0 7 7 7 5 Regulator of chromosome condensation (RCC1) repeat Phage_P2_GpU PF06995.11 ORF83009 - 0.0016 18.0 0.4 5.2 6.7 0.1 4.9 4 1 0 4 4 4 1 Phage P2 GpU DUF155 PF02582.14 ORF83009 - 1.7 8.7 7.4 15 5.7 0.4 4.8 4 2 0 4 4 4 0 Uncharacterised ACR, YagE family COG1723 Pkinase PF00069.25 ORF82682 - 3.2e-69 233.2 0.0 3.7e-69 233.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82682 - 5.2e-41 140.6 0.0 6.4e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF82682 - 0.00013 21.4 0.1 0.0003 20.2 0.0 1.5 2 0 0 2 2 2 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF82682 - 0.05 13.1 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Seadorna_VP7 PF07387.11 ORF82682 - 0.063 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 Mak16 PF04874.14 ORF81981 - 0.67 10.6 1.9 1.7 9.3 1.8 1.6 1 1 0 1 1 1 0 Mak16 protein C-terminal region EF-hand_6 PF13405.6 ORF80924 - 0.02 14.8 0.0 0.066 13.2 0.0 1.9 1 0 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 ORF80924 - 0.049 13.2 0.1 0.17 11.5 0.0 2.0 2 0 0 2 2 2 0 EF hand L27_2 PF09045.10 ORF80924 - 0.05 13.6 0.2 0.11 12.5 0.2 1.6 1 0 0 1 1 1 0 L27_2 EF-hand_5 PF13202.6 ORF80924 - 0.064 12.8 0.0 0.16 11.5 0.0 1.7 1 0 0 1 1 1 0 EF hand Ion_trans PF00520.31 ORF80723 - 2.9e-14 52.9 21.7 4.4e-14 52.3 21.7 1.2 1 0 0 1 1 1 1 Ion transport protein Musclin PF11037.8 ORF80723 - 0.091 12.7 1.6 0.18 11.8 1.6 1.4 1 0 0 1 1 1 0 Insulin-resistance promoting peptide in skeletal muscle TMCO5 PF14992.6 ORF80723 - 6.3 6.3 9.7 0.35 10.4 0.7 2.2 2 0 0 2 2 2 0 TMCO5 family DUF4127 PF13552.6 ORF77284 - 0.086 11.4 0.0 0.11 11.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4127) INTS5_N PF14837.6 ORF77284 - 0.12 11.9 0.0 0.33 10.5 0.0 1.7 1 1 0 1 1 1 0 Integrator complex subunit 5 N-terminus CRAM_rpt PF07016.11 ORF76865 - 0.043 13.6 0.4 0.091 12.6 0.4 1.5 1 0 0 1 1 1 0 Cysteine-rich acidic integral membrane protein precursor PARP PF00644.20 ORF76773 - 5.9e-20 71.7 0.1 1e-19 70.9 0.1 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DsrC PF04358.13 ORF76773 - 0.085 13.4 0.1 0.14 12.7 0.1 1.4 1 0 0 1 1 1 0 DsrC like protein SUKH_5 PF14567.6 ORF71029 - 0.0009 19.0 0.2 0.0034 17.1 0.0 1.9 2 0 0 2 2 2 1 SMI1-KNR4 cell-wall SMI1_KNR4 PF09346.10 ORF71029 - 0.022 15.1 0.0 0.042 14.3 0.0 1.6 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) SUKH_6 PF14568.6 ORF71029 - 0.11 12.9 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 SMI1-KNR4 cell-wall Quaking_NLS PF16551.5 ORF70968 - 0.12 12.0 0.8 13 5.6 0.1 2.5 2 0 0 2 2 2 0 Putative nuclear localisation signal of quaking Pkinase PF00069.25 ORF68219 - 3.2e-69 233.2 0.0 3.7e-69 233.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF68219 - 5.2e-41 140.6 0.0 6.4e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF68219 - 0.00013 21.4 0.1 0.0003 20.2 0.0 1.5 2 0 0 2 2 2 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF68219 - 0.05 13.1 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Seadorna_VP7 PF07387.11 ORF68219 - 0.063 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 Prefoldin PF02996.17 ORF65205 - 0.31 10.9 3.6 11 6.0 0.1 2.2 2 0 0 2 2 2 0 Prefoldin subunit CASP_C PF08172.12 ORF65205 - 1.4 8.2 6.3 0.22 10.8 1.9 1.9 2 1 0 2 2 2 0 CASP C terminal Rx_N PF18052.1 ORF65205 - 2.1 8.7 8.3 1.1 9.6 2.9 2.5 2 1 0 2 2 2 0 Rx N-terminal domain PSK_trans_fac PF07704.11 ORF65205 - 5.8 7.8 18.4 1.1 10.0 1.8 2.9 3 0 0 3 3 3 0 Rv0623-like transcription factor Carb_anhydrase PF00194.21 ORF65202 - 1.2e-29 103.7 0.1 1.8e-29 103.1 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMEM132D_C PF15706.5 ORF65202 - 0.0035 17.1 0.5 0.018 14.8 0.1 2.1 2 0 0 2 2 2 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Claudin_3 PF06653.11 ORF65202 - 0.057 13.4 0.4 0.18 11.7 0.1 1.9 2 0 0 2 2 2 0 Tight junction protein, Claudin-like TMEM154 PF15102.6 ORF65202 - 0.089 12.7 0.0 0.089 12.7 0.0 2.2 3 0 0 3 3 3 0 TMEM154 protein family eIF2_C PF09173.11 ORF6335 - 8.7e-29 99.6 1.0 1.4e-28 98.9 0.3 1.7 2 0 0 2 2 2 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU PF00009.27 ORF6335 - 5.1e-09 35.9 0.0 6.4e-09 35.6 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF6335 - 8.3e-09 35.7 1.0 2.2e-08 34.4 0.4 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1_Xtn PF16897.5 ORF6335 - 0.18 11.9 1.1 0.93 9.5 0.2 2.2 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain RRP36 PF06102.12 ORF62204 - 0.013 15.5 8.7 0.013 15.5 8.7 3.4 2 1 0 3 3 3 0 rRNA biogenesis protein RRP36 UPF0240 PF06784.11 ORF62204 - 0.025 14.7 1.0 0.025 14.7 1.0 3.0 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0240) Spc7 PF08317.11 ORF62204 - 0.16 10.8 42.1 0.017 14.0 9.0 3.2 1 1 1 3 3 3 0 Spc7 kinetochore protein CENP-F_leu_zip PF10473.9 ORF62204 - 0.25 11.4 33.5 0.2 11.7 8.4 3.5 2 1 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HMG_box_2 PF09011.10 ORF62204 - 0.63 10.7 4.9 0.7 10.5 0.1 2.9 2 1 1 3 3 3 0 HMG-box domain A2M_recep PF07677.14 ORF62204 - 1.2 9.9 7.7 9.4 7.0 0.0 3.4 2 1 2 4 4 4 0 A-macroglobulin receptor binding domain KASH_CCD PF14662.6 ORF62204 - 4.3 7.1 37.7 4 7.2 11.1 3.3 1 1 3 4 4 4 0 Coiled-coil region of CCDC155 or KASH Viral_P18 PF04521.13 ORF62204 - 5.4 6.8 6.6 2.7 7.8 0.1 2.9 2 1 0 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein CRAM_rpt PF07016.11 ORF60164 - 0.043 13.6 0.4 0.091 12.6 0.4 1.5 1 0 0 1 1 1 0 Cysteine-rich acidic integral membrane protein precursor TMF_DNA_bd PF12329.8 ORF52730 - 0.012 15.6 9.9 0.012 15.6 9.9 3.1 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF763 PF05559.11 ORF52730 - 0.16 11.2 5.6 0.21 10.7 5.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF763) ResB PF05140.14 ORF52730 - 0.72 8.5 5.1 1.3 7.7 5.2 1.4 1 1 0 1 1 1 0 ResB-like family DUF3502 PF12010.8 ORF52730 - 3 8.5 11.4 0.67 10.6 7.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3502) Membralin PF09746.9 ORF52730 - 6.3 5.7 12.6 4.4 6.2 11.2 1.4 1 1 0 1 1 1 0 Tumour-associated protein DUF1664 PF07889.12 ORF50012 - 0.0085 16.1 27.8 0.13 12.4 3.7 4.6 2 2 1 4 4 4 3 Protein of unknown function (DUF1664) DUF4795 PF16043.5 ORF50012 - 0.049 13.2 28.5 0.043 13.4 14.3 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF2203 PF09969.9 ORF50012 - 0.082 13.6 17.3 1.5 9.5 1.6 3.7 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) KxDL PF10241.9 ORF50012 - 0.16 12.3 14.4 8.6 6.7 0.1 4.6 3 1 1 4 4 4 0 Uncharacterized conserved protein Syntaxin_2 PF14523.6 ORF50012 - 0.72 10.3 29.5 5.1 7.5 5.5 4.2 2 1 2 4 4 4 0 Syntaxin-like protein ZnuA PF01297.17 ORF50012 - 0.87 8.9 6.0 1.2 8.5 0.2 2.8 2 1 1 3 3 3 0 Zinc-uptake complex component A periplasmic COG5 PF10392.9 ORF50012 - 0.89 9.7 14.6 3.1 8.0 0.2 4.3 1 1 3 4 4 4 0 Golgi transport complex subunit 5 Tweety PF04906.13 ORF50012 - 1.7 7.2 8.5 4.2 5.9 0.1 3.0 2 1 1 3 3 3 0 Tweety Occludin_ELL PF07303.13 ORF50012 - 1.8 9.3 18.5 1.3 9.8 1.1 4.7 1 1 4 5 5 5 0 Occludin homology domain COG2 PF06148.11 ORF50012 - 1.8 8.6 22.1 0.37 10.9 0.8 4.3 1 1 2 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF16 PF01519.16 ORF50012 - 2.5 8.7 34.8 2.2 8.8 5.0 4.9 1 1 2 3 3 2 0 Protein of unknown function DUF16 DUF4446 PF14584.6 ORF50012 - 3.8 7.5 24.0 0.75 9.8 1.8 4.4 1 1 1 4 4 4 0 Protein of unknown function (DUF4446) Spectrin PF00435.21 ORF50012 - 7.3 7.1 17.2 8.1 7.0 1.9 3.9 1 1 2 4 4 4 0 Spectrin repeat Lectin_like PF18560.1 ORF44563 - 0.11 12.6 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 Lectin like domain Chloroa_b-bind PF00504.21 ORF41086 - 1.3e-45 155.8 2.1 4e-28 99.0 0.3 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein DUF1129 PF06570.11 ORF34457 - 8.8 5.8 11.0 0.48 9.9 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) Band_7 PF01145.25 ORF30156 - 7.7e-27 94.4 0.6 7.7e-27 94.4 0.6 1.6 1 1 1 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 ORF30156 - 6e-11 42.2 0.0 1.7e-10 40.8 0.0 1.8 1 0 0 1 1 1 1 C-terminal region of band_7 DUF2378 PF09536.10 ORF30156 - 0.065 13.1 0.0 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2378) DUF1997 PF09366.10 ORF30156 - 0.1 12.8 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1997) BPD_transp_1 PF00528.22 ORF25289 - 7.1e-22 78.0 15.9 7.1e-22 78.0 15.9 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Spore_YabQ PF09578.10 ORF25289 - 1.6 9.0 7.2 0.21 11.8 1.6 2.4 2 0 0 2 2 2 0 Spore cortex protein YabQ (Spore_YabQ) Pkinase PF00069.25 ORF22172 - 2.4e-28 99.3 2.5 3.5e-28 98.7 2.5 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22172 - 7.1e-14 51.7 0.4 1.8e-13 50.4 0.4 1.7 1 1 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF22172 - 8.8e-06 24.9 6.6 1.2e-05 24.5 6.6 1.3 1 1 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF22172 - 0.00047 20.2 0.1 0.021 14.8 0.1 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF22172 - 0.11 11.9 0.2 0.21 10.9 0.2 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DnaJ PF00226.31 ORF2214 - 0.00054 20.0 0.0 0.0014 18.7 0.0 1.6 1 0 0 1 1 1 1 DnaJ domain Forkhead_N PF08430.12 ORF2214 - 0.12 13.0 20.3 0.36 11.4 20.3 1.8 1 0 0 1 1 1 0 Forkhead N-terminal region Mem_trans PF03547.18 ORF2214 - 0.17 10.2 4.0 0.22 9.9 4.0 1.1 1 0 0 1 1 1 0 Membrane transport protein NARP1 PF12569.8 ORF2214 - 0.45 9.4 12.5 0.55 9.1 12.5 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 ORC6 PF05460.13 ORF2214 - 0.98 8.6 21.2 1.3 8.2 21.2 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) SSrecog PF03531.14 ORF2214 - 1.7 8.6 3.6 5.2 7.1 0.3 2.3 2 0 0 2 2 2 0 Structure-specific recognition protein (SSRP1) Ndc1_Nup PF09531.10 ORF2214 - 2.3 6.8 12.6 2.9 6.5 12.6 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Menin PF05053.13 ORF2214 - 2.7 6.3 9.5 3.3 6.0 9.5 1.1 1 0 0 1 1 1 0 Menin Presenilin PF01080.17 ORF2214 - 5.8 5.6 13.6 7.2 5.3 13.6 1.1 1 0 0 1 1 1 0 Presenilin PPL5 PF18168.1 ORF2214 - 7.1 5.8 8.7 11 5.2 8.7 1.3 1 0 0 1 1 1 0 Prim-pol family 5 Neur_chan_memb PF02932.16 ORF2214 - 8.5 6.4 9.7 12 5.9 9.7 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Pkinase PF00069.25 ORF21038 - 3.2e-69 233.2 0.0 3.7e-69 233.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF21038 - 5.2e-41 140.6 0.0 6.4e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF21038 - 0.00013 21.4 0.1 0.0003 20.2 0.0 1.5 2 0 0 2 2 2 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF21038 - 0.05 13.1 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Seadorna_VP7 PF07387.11 ORF21038 - 0.063 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 BPL_N PF09825.9 ORF18176 - 1.3e-12 47.5 0.1 2.8e-08 33.2 0.1 2.1 2 0 0 2 2 2 2 Biotin-protein ligase, N terminal DJ-1_PfpI PF01965.24 ORF18176 - 7e-06 25.9 0.0 1.2e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_5 PF13507.6 ORF18176 - 0.011 14.9 0.0 1.1 8.3 0.0 2.2 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 ORF18176 - 0.044 13.4 0.0 0.069 12.7 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain NSP10 PF09401.10 ORF18176 - 0.062 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 RNA synthesis protein NSP10 MR_MLE_C PF13378.6 ORF1735 - 3.5e-41 141.2 0.0 5e-41 140.7 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 ORF1735 - 9.3e-06 25.9 1.2 1.8e-05 24.9 0.1 2.0 2 1 1 3 3 3 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AKNA PF12443.8 ORF15897 - 3.2 8.5 7.0 0.83 10.3 1.9 2.5 2 1 0 2 2 2 0 AT-hook-containing transcription factor DUF2203 PF09969.9 ORF15897 - 3.9 8.2 9.6 6.8 7.4 1.4 2.7 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) Carb_anhydrase PF00194.21 ORF147097 - 8e-33 114.0 0.3 1.1e-32 113.5 0.3 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMEM132D_C PF15706.5 ORF147097 - 0.0025 17.6 0.5 0.018 14.8 0.1 2.2 2 0 0 2 2 2 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TMEM154 PF15102.6 ORF147097 - 0.015 15.2 0.0 0.044 13.7 0.0 1.8 1 1 0 1 1 1 0 TMEM154 protein family Peptidase_C1 PF00112.23 ORF146357 - 5.2e-27 95.4 9.2 8.9e-27 94.6 9.2 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF146357 - 1.3e-14 54.3 9.4 3.3e-13 49.8 6.9 2.4 2 0 0 2 2 2 2 Cathepsin propeptide inhibitor domain (I29) THP2 PF09432.10 ORF145567 - 0.00086 19.4 1.7 3.3 7.8 0.1 4.1 3 2 1 4 4 4 2 Tho complex subunit THP2 DUF4332 PF14229.6 ORF145567 - 0.061 13.6 1.3 0.53 10.5 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4332) VirJ PF06057.11 ORF145567 - 0.079 12.8 0.0 17 5.2 0.0 3.6 3 1 2 5 5 5 0 Bacterial virulence protein (VirJ) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks53.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks53.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks53.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks53.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:25:59 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PUF PF00806.19 ORF143428 - 2e-52 172.0 30.3 5.2e-10 38.5 0.2 8.0 9 0 0 9 9 9 7 Pumilio-family RNA binding repeat TBPIP PF07106.13 ORF143428 - 6.9e-05 22.7 2.8 0.85 9.6 0.0 5.3 7 0 0 7 7 7 2 TBPIP/Hop2 winged helix domain HNOB PF07700.15 ORF143428 - 0.0082 16.1 2.4 15 5.5 0.0 4.2 2 1 1 3 3 3 1 Haem-NO-binding MgtE_N PF03448.17 ORF143428 - 0.019 15.5 0.1 5 7.8 0.1 2.8 1 1 2 3 3 3 0 MgtE intracellular N domain DUF445 PF04286.12 ORF143428 - 0.023 14.5 3.0 0.036 13.9 3.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF445) ClpB_D2-small PF10431.9 ORF143428 - 0.079 13.0 0.0 20 5.3 0.0 3.2 1 1 1 2 2 2 0 C-terminal, D2-small domain, of ClpB protein ACDC PF14733.6 ORF143428 - 8.5 6.8 11.3 7.7 6.9 1.5 4.2 2 1 1 3 3 3 0 AP2-coincident C-terminal NHase_alpha PF02979.16 ORF140069 - 0.023 14.0 1.0 0.037 13.3 1.0 1.2 1 0 0 1 1 1 0 Nitrile hydratase, alpha chain FGE-sulfatase PF03781.16 ORF139823 - 2.3e-24 86.4 3.4 7.9e-24 84.6 2.9 1.9 2 0 0 2 2 2 1 Sulfatase-modifying factor enzyme 1 PqiA PF04403.13 ORF136529 - 0.0011 18.8 1.7 0.0011 18.8 1.7 2.5 3 0 0 3 3 3 1 Paraquat-inducible protein A Ribosomal_S19e PF01090.19 ORF136529 - 0.096 12.4 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S19e SelA PF03841.13 ORF134210 - 2.6e-140 467.6 0.0 3e-140 467.4 0.0 1.0 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase Aminotran_5 PF00266.19 ORF134210 - 0.0083 15.1 0.2 0.02 13.8 0.2 1.5 1 1 0 1 1 1 1 Aminotransferase class-V Pkinase PF00069.25 ORF133833 - 3.2e-69 233.2 0.0 3.7e-69 233.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF133833 - 5.2e-41 140.6 0.0 6.4e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF133833 - 0.00013 21.4 0.1 0.0003 20.2 0.0 1.6 2 0 0 2 2 2 1 Kinase-like YrbL-PhoP_reg PF10707.9 ORF133833 - 0.05 13.1 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Seadorna_VP7 PF07387.11 ORF133833 - 0.063 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 BPD_transp_2 PF02653.16 ORF132050 - 1.2e-47 162.3 44.6 1.2e-47 162.3 44.6 1.5 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF3671 PF12420.8 ORF132050 - 0.59 10.2 6.8 0.77 9.9 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function 5_nucleotid_C PF02872.18 ORF127271 - 0.00024 21.4 0.0 0.00032 21.0 0.0 1.3 1 0 0 1 1 1 1 5'-nucleotidase, C-terminal domain DNA_ligase_OB_2 PF14743.6 ORF118745 - 9.8e-28 96.0 1.0 2.1e-27 94.9 1.0 1.6 1 0 0 1 1 1 1 DNA ligase OB-like domain DNA_ligase_A_M PF01068.21 ORF118745 - 5.6e-13 49.0 1.1 1.9e-12 47.3 1.1 1.9 1 1 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.10 ORF118745 - 0.00016 22.0 0.2 0.00028 21.3 0.2 1.4 1 0 0 1 1 1 1 RNA ligase DUF4666 PF15697.5 ORF118745 - 0.43 11.3 2.9 4.7 7.9 0.5 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4666) EF-hand_6 PF13405.6 ORF1186 - 0.0015 18.3 0.1 0.0085 16.0 0.0 2.2 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF1186 - 0.028 14.0 0.0 0.067 12.8 0.0 1.6 1 0 0 1 1 1 0 EF hand EF-hand_7 PF13499.6 ORF1186 - 0.034 14.6 0.0 0.063 13.7 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF1186 - 0.098 12.2 0.0 0.27 10.8 0.0 1.8 1 0 0 1 1 1 0 EF hand Mak16 PF04874.14 ORF113069 - 0.67 10.6 1.9 1.7 9.3 1.8 1.6 1 1 0 1 1 1 0 Mak16 protein C-terminal region DUF726 PF05277.12 ORF105132 - 5.9e-26 91.2 4.3 7.6e-21 74.4 0.2 3.0 2 1 0 2 2 2 2 Protein of unknown function (DUF726) DUF676 PF05057.14 ORF105132 - 0.017 14.6 0.1 3.7 7.0 0.0 2.4 2 0 0 2 2 2 0 Putative serine esterase (DUF676) UPF0565 PF10561.9 ORF105132 - 0.044 13.0 0.1 0.057 12.6 0.1 1.3 1 1 0 1 1 1 0 Uncharacterised protein family UPF0565 DUF900 PF05990.12 ORF105132 - 0.093 12.2 0.0 0.41 10.1 0.0 1.9 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF900) ELO PF01151.18 ORF104156 - 0.24 10.9 3.1 0.79 9.2 0.6 2.2 2 0 0 2 2 2 0 GNS1/SUR4 family PX PF00787.24 ORF102048 - 4.7e-11 42.7 0.0 9.3e-11 41.7 0.0 1.5 1 0 0 1 1 1 1 PX domain Vps51 PF08700.11 ORF102048 - 0.0058 16.7 2.0 0.83 9.8 0.2 2.5 2 0 0 2 2 2 2 Vps51/Vps67 Vps5 PF09325.10 ORF102048 - 0.0063 16.1 1.8 0.0092 15.5 1.8 1.2 1 0 0 1 1 1 1 Vps5 C terminal like LamB_YcsF PF03746.16 NODE_20252_length_973_cov_504.497868_g14637_i1reverse_frame_1 - 0.027 14.2 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 LamB/YcsF family KAAG1 PF15354.6 NODE_20250_length_973_cov_751.385928_g15522_i0reverse_frame_1 - 0.095 13.3 0.5 0.25 11.9 0.5 1.8 1 0 0 1 1 1 0 Kidney-associated antigen 1 DUF3492 PF11997.8 ORF97217 - 2.5 7.8 5.7 1.5 8.5 1.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3492) adh_short PF00106.25 ORF96774 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF96774 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF96774 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF96774 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF96774 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MSP PF01716.18 ORF89974 - 5.7e-83 277.8 0.3 6.8e-83 277.6 0.3 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide adh_short PF00106.25 ORF86506 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF86506 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF86506 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF86506 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF86506 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Thi4 PF01946.17 ORF76867 - 3.9e-105 350.3 0.3 4.7e-105 350.0 0.3 1.1 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 ORF76867 - 2.3e-10 40.6 1.6 1.1e-08 35.0 0.3 2.1 1 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF76867 - 1.2e-08 34.5 0.5 8.8e-07 28.3 0.1 2.2 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF76867 - 7.1e-08 32.0 0.2 1.8e-07 30.7 0.2 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF76867 - 7.8e-08 32.4 0.0 1.8e-07 31.3 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 ORF76867 - 9.2e-05 22.5 2.0 0.0054 16.7 0.0 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF76867 - 0.0001 21.2 0.7 0.00025 19.9 0.1 1.9 3 0 0 3 3 3 1 HI0933-like protein FAD_oxidored PF12831.7 ORF76867 - 0.00012 21.6 0.1 0.00012 21.6 0.1 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF76867 - 0.00016 20.9 1.2 0.0003 20.0 0.2 1.8 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 ORF76867 - 0.00045 19.6 0.2 0.0015 17.9 0.1 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF76867 - 0.0027 17.0 0.0 0.005 16.1 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.6 ORF76867 - 0.0067 15.6 0.0 0.097 11.8 0.0 2.2 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) GMC_oxred_N PF00732.19 ORF76867 - 0.017 14.5 0.1 0.16 11.3 0.0 2.1 2 0 0 2 2 2 0 GMC oxidoreductase GIDA PF01134.22 ORF76867 - 0.018 14.2 0.3 0.068 12.2 0.2 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A Amino_oxidase PF01593.24 ORF76867 - 0.082 12.2 0.0 0.17 11.2 0.0 1.5 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Lipase_3 PF01764.25 ORF76450 - 1e-30 106.5 0.0 1.8e-30 105.7 0.0 1.4 1 0 0 1 1 1 1 Lipase (class 3) Esterase PF00756.20 ORF76450 - 0.0029 17.3 0.0 0.0057 16.3 0.0 1.4 1 0 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 ORF76450 - 0.021 14.1 0.0 0.036 13.3 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF76450 - 0.05 13.2 0.0 0.097 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Abhydrolase_6 PF12697.7 ORF76450 - 0.066 13.8 0.0 0.07 13.7 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF76450 - 0.072 12.7 0.1 0.27 10.8 0.0 1.7 1 1 1 2 2 2 0 alpha/beta hydrolase fold Lipase_3 PF01764.25 ORF74196 - 3.5e-28 98.3 0.0 5.4e-28 97.6 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_5 PF12695.7 ORF74196 - 0.00068 19.4 0.0 0.0015 18.3 0.0 1.5 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF2974 PF11187.8 ORF74196 - 0.0067 16.0 0.1 0.018 14.6 0.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 ORF74196 - 0.0093 15.3 0.0 0.015 14.5 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF74196 - 0.012 15.3 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold PGAP1 PF07819.13 ORF74196 - 0.016 15.0 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein UPF0227 PF05728.12 ORF74196 - 0.023 14.7 0.0 0.053 13.5 0.0 1.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0227) Abhydrolase_6 PF12697.7 ORF74196 - 0.053 14.1 0.0 0.067 13.8 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Cutinase PF01083.22 ORF74196 - 0.055 13.4 0.2 0.1 12.6 0.0 1.6 2 0 0 2 2 2 0 Cutinase CLU_N PF15044.6 ORF71616 - 0.082 13.3 0.1 0.25 11.8 0.1 1.8 1 0 0 1 1 1 0 Mitochondrial function, CLU-N-term Esterase_phd PF10503.9 ORF66795 - 2.7e-06 27.0 0.0 4.7e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 Esterase PHB depolymerase Peptidase_S9 PF00326.21 ORF66795 - 2.8e-05 23.7 0.5 0.00017 21.2 0.0 2.4 3 0 0 3 3 3 1 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 ORF66795 - 0.00027 20.8 0.0 0.00047 20.0 0.0 1.3 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF66795 - 0.0051 16.4 0.0 0.0078 15.8 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.13 ORF66795 - 0.0066 16.3 0.0 0.01 15.7 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 ORF66795 - 0.0066 15.2 0.0 0.0094 14.7 0.0 1.1 1 0 0 1 1 1 1 Acetyl xylan esterase (AXE1) Metallophos PF00149.28 ORF63266 - 6e-37 128.1 0.2 9.4e-37 127.5 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF63266 - 0.014 15.8 0.0 0.032 14.7 0.0 1.6 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain IBR PF01485.21 ORF6207 - 0.00053 20.2 7.4 0.00053 20.2 7.4 4.3 3 1 0 3 3 3 2 IBR domain, a half RING-finger domain DLH PF01738.18 ORF62065 - 1.8e-31 109.4 0.5 1.8e-31 109.4 0.5 1.4 2 0 0 2 2 2 1 Dienelactone hydrolase family BAAT_C PF08840.11 ORF62065 - 0.0053 16.7 0.9 0.42 10.5 0.1 3.0 3 0 0 3 3 3 1 BAAT / Acyl-CoA thioester hydrolase C terminal DUF1100 PF06500.11 ORF62065 - 0.014 14.2 0.0 0.024 13.4 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) AXE1 PF05448.12 ORF62065 - 0.016 13.9 1.0 0.16 10.6 0.6 2.1 1 1 1 2 2 2 0 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 ORF62065 - 0.027 13.9 0.6 0.061 12.8 0.6 1.6 1 0 0 1 1 1 0 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF62065 - 0.085 13.5 0.0 0.16 12.6 0.0 1.5 1 0 0 1 1 1 0 Alpha/beta hydrolase family Thi4 PF01946.17 ORF60165 - 3.9e-105 350.3 0.3 4.7e-105 350.0 0.3 1.1 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 ORF60165 - 2.3e-10 40.6 1.6 1.1e-08 35.0 0.3 2.1 1 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 ORF60165 - 1.2e-08 34.5 0.5 8.8e-07 28.3 0.1 2.2 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF60165 - 7.1e-08 32.0 0.2 1.8e-07 30.7 0.2 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF60165 - 7.8e-08 32.4 0.0 1.8e-07 31.3 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 ORF60165 - 9.2e-05 22.5 2.0 0.0054 16.7 0.0 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding HI0933_like PF03486.14 ORF60165 - 0.0001 21.2 0.7 0.00025 19.9 0.1 1.9 3 0 0 3 3 3 1 HI0933-like protein FAD_oxidored PF12831.7 ORF60165 - 0.00012 21.6 0.1 0.00012 21.6 0.1 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 ORF60165 - 0.00016 20.9 1.2 0.0003 20.0 0.2 1.8 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 ORF60165 - 0.00045 19.6 0.2 0.0015 17.9 0.1 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 ORF60165 - 0.0027 17.0 0.0 0.005 16.1 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.6 ORF60165 - 0.0067 15.6 0.0 0.097 11.8 0.0 2.2 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) GMC_oxred_N PF00732.19 ORF60165 - 0.017 14.5 0.1 0.16 11.3 0.0 2.1 2 0 0 2 2 2 0 GMC oxidoreductase GIDA PF01134.22 ORF60165 - 0.018 14.2 0.3 0.068 12.2 0.2 1.9 2 0 0 2 2 2 0 Glucose inhibited division protein A Amino_oxidase PF01593.24 ORF60165 - 0.082 12.2 0.0 0.17 11.2 0.0 1.5 2 0 0 2 2 2 0 Flavin containing amine oxidoreductase Csm1_N PF18504.1 ORF57888 - 0.022 15.1 4.0 0.022 15.1 4.0 3.0 2 1 1 3 3 3 0 Csm1 N-terminal domain Prominin PF05478.11 ORF57888 - 0.2 9.5 11.4 0.29 9.1 11.4 1.2 1 0 0 1 1 1 0 Prominin LCIB_C_CA PF18599.1 ORF57888 - 0.83 8.9 2.8 1.3 8.2 2.4 1.6 1 1 0 1 1 1 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases CorA PF01544.18 ORF57888 - 0.92 8.8 7.9 1.8 7.8 7.9 1.4 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein TBCC_N PF16752.5 ORF50984 - 1.7 9.1 6.4 0.46 10.9 0.3 2.7 2 1 1 3 3 3 0 Tubulin-specific chaperone C N-terminal domain Tubulin_C PF03953.17 ORF39981 - 2.3e-51 173.2 0.2 2.3e-51 173.2 0.2 1.4 2 0 0 2 2 2 1 Tubulin C-terminal domain Tubulin PF00091.25 ORF39981 - 4.2e-11 43.4 0.0 6.6e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Acetyltransf_1 PF00583.25 ORF39621 - 2.6e-12 47.0 0.1 7.7e-12 45.5 0.1 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF39621 - 2.4e-11 43.7 0.1 8.1e-11 42.0 0.1 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF39621 - 5.6e-08 33.1 0.1 1.6e-07 31.6 0.1 1.9 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF39621 - 1.4e-05 24.9 0.0 3.4e-05 23.7 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF39621 - 0.0047 17.0 0.0 0.033 14.3 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF39621 - 0.063 13.4 0.1 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase NESP55 PF06390.12 ORF39621 - 0.12 11.9 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) adh_short PF00106.25 ORF39427 - 5.9e-36 123.8 0.0 8e-36 123.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF39427 - 1.2e-20 74.1 0.0 1.6e-20 73.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF39427 - 5.5e-08 32.9 0.0 7.7e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF39427 - 0.02 14.3 0.7 0.056 12.8 0.7 1.7 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) adh_short PF00106.25 ORF35333 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF35333 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF35333 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF35333 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF35333 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FGGY_C PF02782.16 ORF3205 - 4.9e-33 114.5 0.7 6.7e-33 114.1 0.7 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 ORF3205 - 8.3e-25 87.8 0.2 1.3e-24 87.2 0.2 1.3 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain NMO PF03060.15 ORF3205 - 0.0088 15.5 0.1 0.013 15.0 0.1 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase Prok-RING_4 PF14447.6 ORF26576 - 0.024 14.5 4.9 8.9 6.3 0.1 3.7 3 0 0 3 3 3 0 Prokaryotic RING finger family 4 Thioredoxin_2 PF13098.6 ORF26576 - 0.043 14.3 1.2 26 5.3 0.0 3.0 3 0 0 3 3 3 0 Thioredoxin-like domain zf-MIZ PF02891.20 ORF26576 - 0.081 12.7 4.2 18 5.2 0.0 3.5 3 0 0 3 3 3 0 MIZ/SP-RING zinc finger zf-Di19 PF05605.12 ORF26576 - 0.31 11.4 8.2 30 5.0 0.2 3.4 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding Aa_trans PF01490.18 ORF23567 - 4.3e-28 98.1 8.3 4.9e-28 98.0 8.3 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein p450 PF00067.22 ORF2199 - 3.1e-49 168.0 0.4 3.6e-49 167.8 0.4 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF1325 PF07039.11 ORF20063 - 0.0031 17.6 0.1 1.1 9.3 0.0 3.0 3 0 0 3 3 3 2 SGF29 tudor-like domain DUF4926 PF16277.5 ORF20063 - 0.12 11.7 2.0 11 5.5 0.3 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4926) Tudor_3 PF18115.1 ORF20063 - 0.26 11.2 0.8 2 8.3 0.0 2.7 3 0 0 3 3 3 0 DNA repair protein Crb2 Tudor domain Acetyltransf_1 PF00583.25 ORF17949 - 2.6e-12 47.0 0.1 7.7e-12 45.5 0.1 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF17949 - 2.4e-11 43.7 0.1 8.1e-11 42.0 0.1 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF17949 - 5.6e-08 33.1 0.1 1.6e-07 31.6 0.1 1.9 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF17949 - 1.4e-05 24.9 0.0 3.4e-05 23.7 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 ORF17949 - 0.0047 17.0 0.0 0.033 14.3 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF17949 - 0.063 13.4 0.1 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase NESP55 PF06390.12 ORF17949 - 0.12 11.9 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) Exo_endo_phos PF03372.23 ORF152793 - 1e-21 77.5 0.0 1.3e-21 77.2 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 ORF152793 - 0.00054 19.8 0.0 0.0026 17.6 0.0 2.1 2 1 0 2 2 2 1 Endonuclease-reverse transcriptase DUF5507 PF17612.2 ORF152793 - 0.014 15.1 0.4 1.2 8.8 0.2 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5507) SPOR PF05036.13 ORF143181 - 4.1e-13 49.5 0.1 9.1e-13 48.4 0.1 1.6 1 0 0 1 1 1 1 Sporulation related domain SseC PF04888.12 ORF141076 - 0.00074 19.2 2.1 0.00074 19.2 2.1 2.0 2 0 0 2 2 2 1 Secretion system effector C (SseC) like family zf-RING_2 PF13639.6 ORF138382 - 9e-07 29.1 13.7 2.4e-06 27.8 13.7 1.8 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF138382 - 1.4e-05 25.3 11.8 3.4e-05 24.1 11.8 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF138382 - 0.00055 19.6 4.9 0.00055 19.6 4.9 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF138382 - 0.0056 16.7 5.2 0.011 15.7 5.2 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger DUF2070 PF09843.9 ORF138382 - 0.05 11.9 3.4 0.063 11.6 3.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) zf-C3HC4 PF00097.25 ORF138382 - 0.05 13.5 13.7 0.15 12.0 13.7 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF138382 - 0.12 12.2 12.9 0.31 10.9 12.9 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-Di19 PF05605.12 ORF138382 - 0.36 11.2 11.8 0.28 11.5 3.7 2.6 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-C3HC4_3 PF13920.6 ORF138382 - 0.38 10.7 10.6 0.82 9.6 10.6 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF138382 - 1.1 9.3 13.2 2.3 8.2 13.2 1.6 1 0 0 1 1 1 0 zinc-RING finger domain FANCL_C PF11793.8 ORF138382 - 2.6 8.3 12.4 20 5.5 12.4 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain Kelch_3 PF13415.6 ORF13778 - 7.8e-41 137.6 3.1 1.8e-10 40.8 0.0 6.2 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF13778 - 1e-33 114.5 5.7 8.3e-08 32.3 0.0 5.3 4 1 1 5 5 5 5 Kelch motif Kelch_1 PF01344.25 ORF13778 - 2.2e-33 113.6 0.4 1.1e-11 44.2 0.2 5.1 5 0 0 5 5 5 4 Kelch motif Kelch_4 PF13418.6 ORF13778 - 1.3e-32 111.5 9.1 1.3e-07 31.5 0.0 5.5 6 0 0 6 6 6 5 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF13778 - 9.7e-30 102.1 1.6 2.3e-07 30.7 0.1 4.8 5 0 0 5 5 5 4 Kelch motif Kelch_2 PF07646.15 ORF13778 - 1.1e-24 85.4 1.2 1.3e-05 25.0 0.0 4.9 5 0 0 5 5 5 4 Kelch motif adh_short PF00106.25 ORF134754 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF134754 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF134754 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF134754 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF134754 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyco_hydro_16 PF00722.21 ORF125331 - 1.1e-11 44.5 0.1 1.8e-11 43.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 adh_short PF00106.25 ORF124247 - 2.2e-36 125.2 0.0 3e-36 124.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF124247 - 4.1e-21 75.6 0.0 5.5e-21 75.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF124247 - 5.4e-08 32.9 0.0 7.6e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF124247 - 0.014 14.8 0.7 0.042 13.2 0.7 1.7 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) KH_7 PF17214.3 ORF124247 - 0.028 14.4 0.1 0.069 13.1 0.1 1.6 1 0 0 1 1 1 0 KH domain 3HCDH_N PF02737.18 ORF124247 - 0.077 12.9 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ribosomal_L5e PF17144.4 ORF123743 - 3e-71 238.7 0.9 5.8e-71 237.8 0.9 1.5 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 ORF123743 - 8.4e-20 71.5 12.3 8.4e-20 71.5 12.3 2.7 2 1 0 2 2 2 1 Ribosomal L18 C-terminal region MORN PF02493.20 ORF122970 - 1.3e-41 138.0 49.5 7.8e-07 28.6 0.5 8.9 9 0 0 9 9 9 8 MORN repeat adh_short PF00106.25 ORF118444 - 1.1e-35 122.9 0.0 1.4e-35 122.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF118444 - 2.1e-21 76.6 0.0 2.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF118444 - 3.1e-08 33.7 0.0 4.3e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF118444 - 0.0019 17.6 0.4 0.0096 15.3 0.4 1.9 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 ORF118444 - 0.027 14.3 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDC50 PF03381.15 ORF117468 - 7.2e-51 173.4 2.9 1e-50 172.8 2.9 1.2 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF2206 PF09971.9 ORF117468 - 0.55 8.9 8.7 0.14 10.9 3.4 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2206) CsiD PF08943.10 ORF112807 - 6.9e-150 498.1 0.0 7.9e-150 497.9 0.0 1.0 1 0 0 1 1 1 1 CsiD TauD PF02668.16 ORF112807 - 1.3e-07 31.7 0.1 1e-05 25.5 0.1 2.2 1 1 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family MSP PF01716.18 ORF112155 - 5.7e-83 277.8 0.3 6.8e-83 277.6 0.3 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide MORN PF02493.20 ORF110712 - 3.8e-07 29.6 27.8 0.00031 20.4 0.3 6.4 7 0 0 7 7 7 5 MORN repeat OTU PF02338.19 ORF103101 - 8.5e-11 42.4 0.6 1.9e-10 41.3 0.1 1.9 2 0 0 2 2 2 1 OTU-like cysteine protease Nore1-SARAH PF16517.5 ORF103101 - 0.057 13.3 1.1 0.14 12.1 1.1 1.7 1 0 0 1 1 1 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain Pyr_redox_2 PF07992.14 ORF102669 - 0.12 11.5 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase PNP_phzG_C PF10590.9 NODE_20252_length_973_cov_504.497868_g14637_i1forward_frame_3 - 0.13 12.3 1.9 0.37 10.9 1.9 1.8 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DUF1180 PF06679.12 NODE_20252_length_973_cov_504.497868_g14637_i1forward_frame_2 - 0.52 10.7 5.6 0.33 11.4 2.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1180) LEA_2 PF03168.13 NODE_20250_length_973_cov_751.385928_g15522_i0forward_frame_3 - 0.00053 20.5 0.0 0.0013 19.2 0.0 1.7 2 0 0 2 2 2 1 Late embryogenesis abundant protein Pcc1 PF09341.10 NODE_20250_length_973_cov_751.385928_g15522_i0forward_frame_3 - 0.014 15.5 0.2 0.048 13.8 0.2 1.8 1 0 0 1 1 1 0 Transcription factor Pcc1 Tachystatin_B PF11478.8 NODE_20250_length_973_cov_751.385928_g15522_i0forward_frame_3 - 0.045 13.7 4.2 0.12 12.3 4.2 1.7 1 0 0 1 1 1 0 Antimicrobial chitin binding protein tachystatin B Pacifastin_I PF05375.13 NODE_20250_length_973_cov_751.385928_g15522_i0forward_frame_2 - 0.016 14.9 2.4 0.063 13.0 2.4 2.0 1 0 0 1 1 1 0 Pacifastin inhibitor (LCMII) ATP-synt_8 PF00895.20 NODE_20230_length_974_cov_254.086262_g6969_i1forward_frame_3 - 5.1 7.6 8.1 6.3 7.4 1.4 3.1 2 0 0 2 2 2 0 ATP synthase protein 8 OST-HTH PF12872.7 ORF92808 - 0.082 12.7 0.3 0.15 11.9 0.3 1.3 1 0 0 1 1 1 0 OST-HTH/LOTUS domain Keratin_2_tail PF16210.5 ORF92808 - 0.9 9.8 36.0 1.4 9.2 36.0 1.2 1 0 0 1 1 1 0 Keratin type II cytoskeletal 1 tail Abhydrolase_1 PF00561.20 ORF84871 - 1.2e-10 41.5 0.6 1.5e-05 24.8 0.4 2.7 2 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF84871 - 0.00095 18.5 0.0 2.3 7.4 0.0 3.1 2 1 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 ORF84871 - 0.0073 15.9 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Dienelactone hydrolase family DUF676 PF05057.14 ORF84871 - 0.046 13.2 0.0 0.077 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Metallophos PF00149.28 ORF80823 - 1.8e-11 44.9 1.0 2.7e-11 44.4 1.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF80823 - 0.067 12.2 0.1 0.17 10.9 0.0 1.6 2 0 0 2 2 2 0 PhoD-like phosphatase Cnd1 PF12717.7 ORF73443 - 6.9e-05 22.9 4.3 6.9e-05 22.9 4.3 1.8 2 1 1 3 3 3 1 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 ORF73443 - 0.0061 17.1 2.0 0.37 11.4 0.4 3.3 3 1 0 3 3 3 1 Vacuolar 14 Fab1-binding region MADF_DNA_bdg PF10545.9 ORF73443 - 0.17 12.2 1.4 7.1 7.0 0.1 3.2 3 0 0 3 3 3 0 Alcohol dehydrogenase transcription factor Myb/SANT-like AMP-binding PF00501.28 ORF69752 - 2e-41 142.0 0.0 2.7e-41 141.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF69752 - 5.6e-13 49.7 0.1 1.6e-12 48.2 0.1 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain BTB PF00651.31 ORF66273 - 1.8e-09 37.8 0.0 3.8e-09 36.8 0.0 1.5 1 1 0 1 1 1 1 BTB/POZ domain Hydrolase_4 PF12146.8 ORF64703 - 7.5e-35 120.3 0.0 1.4e-34 119.4 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF64703 - 7.4e-08 32.3 0.0 0.00087 19.0 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF64703 - 1e-06 29.5 0.0 4.9e-06 27.3 0.0 1.8 1 1 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF64703 - 9.5e-05 22.0 0.0 0.0026 17.3 0.0 2.4 1 1 0 1 1 1 1 Prolyl oligopeptidase family AXE1 PF05448.12 ORF64703 - 0.0024 16.6 0.0 0.0041 15.8 0.0 1.3 1 0 0 1 1 1 1 Acetyl xylan esterase (AXE1) FSH1 PF03959.13 ORF64703 - 0.042 13.5 0.0 0.078 12.6 0.0 1.6 1 1 0 1 1 1 0 Serine hydrolase (FSH1) TraF PF13728.6 ORF64703 - 0.089 12.6 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein FAD-SLDH PF12318.8 ORF61868 - 0.11 12.6 0.2 0.17 11.9 0.2 1.4 1 0 0 1 1 1 0 Membrane bound FAD containing D-sorbitol dehydrogenase Peripla_BP_3 PF13377.6 ORF61261 - 7.2e-33 114.3 0.3 1.5e-32 113.2 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF61261 - 2.5e-23 82.9 0.3 3.3e-23 82.5 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF61261 - 1.1e-15 58.0 0.1 1.4e-15 57.6 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain V_ATPase_I PF01496.19 ORF60364 - 0.0043 15.0 15.3 0.011 13.7 5.2 2.0 2 0 0 2 2 2 2 V-type ATPase 116kDa subunit family DivIC PF04977.15 ORF60364 - 0.07 12.9 21.8 0.1 12.4 6.2 3.9 3 1 1 4 4 4 0 Septum formation initiator GAS PF13851.6 ORF60364 - 0.13 11.6 19.8 0.66 9.3 3.9 2.4 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding zf-C4H2 PF10146.9 ORF60364 - 0.16 12.2 12.5 0.42 10.9 0.4 2.5 3 0 0 3 3 3 0 Zinc finger-containing protein DUF3368 PF11848.8 ORF60364 - 0.16 11.7 0.1 0.42 10.4 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3368) PRKG1_interact PF15898.5 ORF60364 - 0.37 11.7 23.8 0.65 10.9 5.4 2.9 3 0 0 3 3 3 0 cGMP-dependent protein kinase interacting domain Cep57_CLD_2 PF14197.6 ORF60364 - 0.56 10.3 11.7 2 8.6 0.2 3.2 3 1 0 3 3 3 0 Centrosome localisation domain of PPC89 DUF3450 PF11932.8 ORF60364 - 0.72 9.1 21.8 0.096 12.0 4.2 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3450) CENP-F_leu_zip PF10473.9 ORF60364 - 1 9.4 26.3 0.8 9.7 12.1 2.4 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 APG6_N PF17675.1 ORF60364 - 1.2 9.7 26.8 0.72 10.4 3.5 3.0 2 1 1 3 3 3 0 Apg6 coiled-coil region DUF724 PF05266.14 ORF60364 - 1.6 8.5 24.1 0.98 9.2 8.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF724) ADIP PF11559.8 ORF60364 - 2.1 8.4 18.3 3.8 7.6 1.4 3.2 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding UPF0242 PF06785.11 ORF60364 - 2.6 8.1 16.2 4.9 7.2 7.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Golgin_A5 PF09787.9 ORF60364 - 5.7 6.3 24.5 1 8.8 11.7 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 UPF0515 PF15135.6 ORF60364 - 6.3 6.1 11.4 0.36 10.2 3.2 2.0 2 0 0 2 2 2 0 Uncharacterised protein UPF0515 Fez1 PF06818.15 ORF60364 - 6.5 7.1 25.8 7.1 7.0 11.5 2.5 1 1 1 2 2 2 0 Fez1 Csm1_N PF18504.1 ORF60364 - 7.5 7.0 17.1 12 6.4 0.3 4.0 3 1 1 4 4 4 0 Csm1 N-terminal domain ADH_zinc_N PF00107.26 ORF60128 - 3.9e-14 52.7 0.1 7.4e-14 51.9 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF60128 - 3.3e-05 23.7 0.1 0.0002 21.2 0.0 2.3 2 1 1 3 3 3 1 Alcohol dehydrogenase GroES-like domain adh_short PF00106.25 ORF60128 - 0.00067 19.2 0.1 0.0012 18.4 0.1 1.3 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 ORF60128 - 0.00087 18.8 0.1 0.0016 17.9 0.1 1.5 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family AlaDh_PNT_C PF01262.21 ORF60128 - 0.0017 17.7 1.0 0.0026 17.1 1.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ELFV_dehydrog PF00208.21 ORF60128 - 0.0091 15.7 0.5 0.015 15.1 0.5 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DapB_N PF01113.20 ORF60128 - 0.011 15.8 0.1 0.81 9.8 0.0 2.4 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus AAA_28 PF13521.6 ORF60128 - 0.057 13.7 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain THF_DHG_CYH_C PF02882.19 ORF60128 - 0.11 11.8 0.1 0.27 10.5 0.1 1.6 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GDP_Man_Dehyd PF16363.5 ORF60128 - 0.14 11.5 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase NmrA PF05368.13 ORF60128 - 0.17 11.4 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Phage_holin_3_3 PF16083.5 ORF60128 - 6 7.1 7.5 0.34 11.1 1.6 2.0 2 0 0 2 2 2 0 LydA holin phage, holin superfamily III Ldh_1_N PF00056.23 ORF59228 - 6.7e-37 126.7 0.1 1.2e-36 125.9 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF59228 - 1.7e-28 99.7 0.0 2.5e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain RRM_1 PF00076.22 ORF58876 - 1.1e-41 140.4 0.1 5.1e-22 77.5 0.1 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF58876 - 3.6e-06 26.6 0.1 0.014 15.0 0.1 2.3 1 1 1 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 ORF58876 - 0.00018 21.5 0.1 0.5 10.5 0.0 2.3 2 0 0 2 2 2 2 Limkain b1 RRM_7 PF16367.5 ORF58876 - 0.00046 20.2 0.9 0.19 11.8 0.1 3.2 2 1 1 3 3 3 1 RNA recognition motif PHM7_cyt PF14703.6 ORF58876 - 0.0083 16.4 0.0 0.12 12.7 0.0 2.2 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter Nup35_RRM_2 PF14605.6 ORF58876 - 0.017 15.1 0.0 0.043 13.8 0.0 1.7 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif OB_RNB PF08206.11 ORF58876 - 0.024 14.3 0.2 1.9 8.2 0.0 2.5 2 0 0 2 2 2 0 Ribonuclease B OB domain Peripla_BP_3 PF13377.6 ORF57536 - 7.2e-33 114.3 0.3 1.5e-32 113.2 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF57536 - 2.5e-23 82.9 0.3 3.3e-23 82.5 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF57536 - 1.1e-15 58.0 0.1 1.4e-15 57.6 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain AA_kinase PF00696.28 ORF54813 - 3.6e-14 53.0 0.0 9.1e-14 51.6 0.0 1.6 1 1 0 1 1 1 1 Amino acid kinase family Pkinase PF00069.25 ORF54411 - 6.3e-68 229.0 1.3 8.5e-68 228.6 1.3 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF54411 - 2.5e-44 151.5 0.4 3.5e-44 151.0 0.4 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF54411 - 8.7e-05 22.0 0.0 0.00015 21.1 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF54411 - 0.001 18.0 0.0 0.0021 16.9 0.0 1.5 1 0 0 1 1 1 1 Fungal protein kinase RPW8 PF05659.11 ORF54411 - 0.0027 17.4 0.4 0.0081 15.9 0.4 1.8 1 0 0 1 1 1 1 Arabidopsis broad-spectrum mildew resistance protein RPW8 Kdo PF06293.14 ORF54411 - 0.0077 15.6 0.8 0.016 14.6 0.2 1.7 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF54411 - 0.0094 14.9 0.5 0.037 13.0 0.2 2.2 2 1 0 2 2 2 1 Haspin like kinase domain APH PF01636.23 ORF54411 - 0.041 13.8 0.0 4.4 7.1 0.0 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family DHHC PF01529.20 ORF53945 - 1.2e-32 112.8 24.6 2.7e-32 111.7 11.2 2.8 3 0 0 3 3 3 2 DHHC palmitoyltransferase DUF3099 PF11298.8 ORF53945 - 0.19 11.9 0.4 6.4 7.0 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3099) adh_short PF00106.25 ORF53938 - 4.5e-37 127.4 0.3 6.1e-37 127.0 0.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF53938 - 8.3e-19 68.1 0.0 1.1e-18 67.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF53938 - 4.1e-07 30.1 0.0 6.4e-07 29.4 0.0 1.3 1 0 0 1 1 1 1 KR domain DUF2251 PF10008.9 ORF53938 - 0.054 13.6 0.3 0.33 11.1 0.0 2.3 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2251) DUF1189 PF06691.11 ORF53938 - 0.28 10.7 2.6 0.38 10.3 1.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1189) Metallophos PF00149.28 ORF53389 - 3.1e-11 44.2 0.9 4.7e-11 43.6 0.9 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF53389 - 0.097 11.7 0.0 0.17 10.9 0.0 1.3 1 0 0 1 1 1 0 PhoD-like phosphatase adh_short PF00106.25 ORF52220 - 1.5e-38 132.2 0.0 2e-38 131.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF52220 - 4.4e-18 65.7 0.0 5.8e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Polysacc_synt_2 PF02719.15 ORF52220 - 7.7e-07 28.5 0.0 9.8e-07 28.2 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF52220 - 8.4e-07 29.1 0.0 1.1e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 KR domain Glyco_tran_WecB PF03808.13 ORF52220 - 0.00093 19.2 0.0 0.0017 18.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase WecB/TagA/CpsF family Epimerase PF01370.21 ORF52220 - 0.0056 16.2 0.0 0.0086 15.6 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF52220 - 0.012 15.5 0.0 0.018 14.9 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding DUF727 PF05303.12 ORF52220 - 0.024 14.7 0.0 0.25 11.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF727) 3HCDH_N PF02737.18 ORF52220 - 0.078 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GDP_Man_Dehyd PF16363.5 ORF52220 - 0.14 11.5 0.0 0.27 10.6 0.0 1.4 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase Sugar_tr PF00083.24 ORF46953 - 3.9e-41 141.4 5.6 4.7e-41 141.1 5.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF46953 - 1.1e-11 44.3 1.9 1.6e-11 43.7 1.9 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Nop PF01798.18 ORF46953 - 0.17 11.3 0.0 0.26 10.7 0.0 1.2 1 0 0 1 1 1 0 snoRNA binding domain, fibrillarin MRG PF05712.13 ORF45089 - 0.05 12.9 2.5 0.099 11.9 2.5 1.4 1 0 0 1 1 1 0 MRG CRM1_repeat PF18777.1 ORF45089 - 0.063 12.8 0.1 0.15 11.6 0.1 1.7 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat Baculo_LEF-11 PF06385.12 ORF45089 - 0.19 12.2 2.4 1.6 9.2 0.1 2.6 2 1 0 2 2 2 0 Baculovirus LEF-11 protein DUF5433 PF17498.2 ORF45089 - 0.33 11.2 1.8 1.4 9.2 0.7 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5433) Ldh_1_N PF00056.23 ORF36077 - 6.7e-37 126.7 0.1 1.2e-36 125.9 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF36077 - 1.7e-28 99.7 0.0 2.5e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain adh_short PF00106.25 ORF36059 - 1.7e-36 125.5 0.2 2.2e-36 125.1 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF36059 - 7.4e-19 68.2 0.0 9e-19 67.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF36059 - 5.4e-07 29.7 0.0 7.4e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF36059 - 0.0036 17.2 0.1 0.006 16.5 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 ORF36059 - 0.018 14.7 0.0 0.032 13.9 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.6 ORF36059 - 0.062 13.2 0.0 0.095 12.6 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding Shikimate_dh_N PF08501.11 ORF3155 - 1.1e-23 83.2 0.0 1.8e-23 82.6 0.0 1.3 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 ORF3155 - 2.4e-10 40.0 0.5 4.1e-10 39.2 0.5 1.4 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 ORF3155 - 3.3e-10 40.2 0.0 7.9e-10 38.9 0.0 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase RRM_1 PF00076.22 ORF30362 - 1.1e-41 140.4 0.1 5.1e-22 77.5 0.1 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF30362 - 3.6e-06 26.6 0.1 0.014 15.0 0.1 2.3 1 1 1 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 ORF30362 - 0.00018 21.5 0.1 0.5 10.5 0.0 2.3 2 0 0 2 2 2 2 Limkain b1 RRM_7 PF16367.5 ORF30362 - 0.00046 20.2 0.9 0.19 11.8 0.1 3.2 2 1 1 3 3 3 1 RNA recognition motif PHM7_cyt PF14703.6 ORF30362 - 0.0083 16.4 0.0 0.12 12.7 0.0 2.2 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter Nup35_RRM_2 PF14605.6 ORF30362 - 0.017 15.1 0.0 0.043 13.8 0.0 1.7 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif OB_RNB PF08206.11 ORF30362 - 0.024 14.3 0.2 1.9 8.2 0.0 2.5 2 0 0 2 2 2 0 Ribonuclease B OB domain LRR_4 PF12799.7 ORF2784 - 2.2e-18 66.0 15.6 7.9e-06 26.1 0.7 4.8 5 0 0 5 5 5 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF2784 - 1.5e-15 56.7 11.9 2.4e-05 24.0 0.6 4.7 2 1 4 6 6 6 5 Leucine rich repeat LRR_9 PF14580.6 ORF2784 - 2.1e-13 50.2 7.4 1.2e-07 31.4 0.7 2.3 1 1 1 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 ORF2784 - 5.5e-06 26.0 7.4 1.4 9.2 0.0 6.0 7 0 0 7 7 7 3 Leucine Rich repeat LRR_1 PF00560.33 ORF2784 - 0.021 15.3 11.7 8.9 7.3 0.5 5.4 5 2 0 5 5 5 0 Leucine Rich Repeat adh_short PF00106.25 ORF2580 - 1e-37 129.5 0.0 1.3e-37 129.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF2580 - 1.7e-17 63.8 0.0 2.2e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Polysacc_synt_2 PF02719.15 ORF2580 - 6.1e-07 28.9 0.0 7.7e-07 28.5 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 ORF2580 - 1.8e-06 28.0 0.0 2.5e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 KR domain Glyco_tran_WecB PF03808.13 ORF2580 - 0.0025 17.8 0.0 0.0044 17.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase WecB/TagA/CpsF family Epimerase PF01370.21 ORF2580 - 0.011 15.2 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family DUF727 PF05303.12 ORF2580 - 0.029 14.4 0.0 0.32 11.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF727) NAD_binding_10 PF13460.6 ORF2580 - 0.053 13.4 0.0 0.083 12.8 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding Cas6 PF09559.10 ORF2580 - 0.067 13.2 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Cas6 Crispr ThrE PF06738.12 ORF21443 - 0.15 11.4 2.3 0.29 10.5 2.3 1.4 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF3447 PF11929.8 ORF21443 - 0.18 11.8 2.2 2 8.5 2.2 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3447) Calreticulin PF00262.18 ORF21163 - 0.0051 15.7 4.3 0.0084 15.0 4.3 1.3 1 0 0 1 1 1 1 Calreticulin family Pkinase PF00069.25 ORF20721 - 5.7e-51 173.4 0.0 7.4e-51 173.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF20721 - 5.8e-21 74.9 0.0 7.7e-21 74.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF20721 - 0.023 14.0 0.0 0.031 13.6 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Haspin_kinase PF12330.8 ORF20721 - 0.03 13.3 0.0 0.048 12.6 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Mito_carr PF00153.27 ORF20378 - 6.8e-52 173.4 2.0 1.7e-17 63.1 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein HMD PF03201.16 ORF20378 - 0.0046 17.2 0.6 1.6 9.0 0.0 3.0 3 0 0 3 3 3 1 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase Misat_Tub_SegII PF10644.9 ORF20378 - 0.12 12.7 0.3 0.98 9.7 0.0 2.1 2 0 0 2 2 2 0 Misato Segment II tubulin-like domain DUF2061 PF09834.9 ORF20378 - 0.13 12.8 0.5 0.13 12.8 0.5 3.1 3 0 0 3 3 3 0 Predicted membrane protein (DUF2061) MmgE_PrpD PF03972.14 ORF18008 - 1.1e-19 70.4 0.0 5.3e-19 68.1 0.0 1.8 1 1 0 1 1 1 1 MmgE/PrpD family PPR_2 PF13041.6 ORF17891 - 2e-13 50.3 0.0 1.6e-06 28.2 0.0 3.3 2 1 1 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF17891 - 2.5e-09 37.1 0.0 0.0016 18.5 0.0 2.3 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF17891 - 1.4e-06 28.1 2.7 0.0095 16.1 0.0 4.1 4 1 0 4 4 4 1 PPR repeat PPR_1 PF12854.7 ORF17891 - 0.00034 20.2 0.0 0.23 11.2 0.0 3.5 4 0 0 4 4 4 1 PPR repeat PPR_long PF17177.4 ORF17891 - 0.001 18.4 0.1 0.002 17.5 0.1 1.4 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP TPR_14 PF13428.6 ORF17891 - 0.11 13.3 2.1 0.34 11.8 0.2 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF17891 - 0.2 11.8 1.3 11 6.3 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat CoA_binding PF02629.19 ORF16842 - 1.3e-29 102.7 0.3 1.3e-29 102.7 0.3 2.3 3 0 0 3 3 3 1 CoA binding domain Ligase_CoA PF00549.19 ORF16842 - 1.6e-23 83.2 0.1 2.6e-23 82.6 0.1 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 ORF16842 - 6e-10 39.1 0.0 1.1e-09 38.3 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 ORF16842 - 0.012 16.1 0.0 0.046 14.2 0.1 2.0 3 0 0 3 3 3 0 CoA binding domain Aa_trans PF01490.18 ORF15430 - 9.7e-21 73.9 13.1 1.2e-20 73.7 13.1 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Bap31 PF05529.12 ORF15430 - 3 7.7 5.5 0.59 10.0 1.5 1.8 2 0 0 2 2 2 0 Bap31/Bap29 transmembrane region Voltage_CLC PF00654.20 ORF150891 - 2e-08 33.9 9.2 2.5e-08 33.5 9.2 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel CBS PF00571.28 ORF150891 - 0.0084 16.5 0.0 5.8 7.4 0.0 2.4 2 0 0 2 2 2 2 CBS domain Toprim_N PF08275.11 ORF150891 - 0.056 13.5 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 DNA primase catalytic core, N-terminal domain ANTH PF07651.16 ORF147799 - 1.5e-14 53.7 2.0 1.5e-14 53.7 2.0 1.4 2 0 0 2 2 2 1 ANTH domain Vps51 PF08700.11 ORF147799 - 0.00047 20.2 6.2 0.1 12.7 0.3 3.0 2 1 0 2 2 2 2 Vps51/Vps67 DUF5070 PF16802.5 ORF147799 - 0.09 12.8 1.2 1.9 8.4 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5070) PX PF00787.24 ORF147799 - 1 9.4 6.5 2.3 8.2 1.5 2.9 3 2 0 3 3 3 0 PX domain Peripla_BP_3 PF13377.6 ORF146162 - 7.2e-33 114.3 0.3 1.5e-32 113.2 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_1 PF00532.21 ORF146162 - 2.5e-23 82.9 0.3 3.3e-23 82.5 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_4 PF13407.6 ORF146162 - 1.1e-15 58.0 0.1 1.4e-15 57.6 0.1 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain Aldo_ket_red PF00248.21 ORF144483 - 2.1e-74 250.4 0.0 2.6e-74 250.1 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family HMMR_N PF15905.5 ORF139901 - 0.061 12.8 7.2 0.11 12.0 7.2 1.4 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DIT1_PvcA PF05141.12 ORF139901 - 0.07 12.6 3.4 0.14 11.6 3.4 1.5 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein 5_3_exonuc_N PF02739.16 ORF139901 - 0.11 12.4 1.7 0.21 11.5 1.4 1.6 1 1 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain UPF0242 PF06785.11 ORF139901 - 0.2 11.7 12.6 0.33 11.0 8.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Atg14 PF10186.9 ORF139901 - 0.35 9.9 5.7 0.56 9.2 5.7 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 GrpE PF01025.19 ORF139901 - 0.48 10.1 11.9 3.6 7.2 9.6 2.7 3 1 0 3 3 3 0 GrpE FAM76 PF16046.5 ORF139901 - 1.3 8.3 9.3 0.96 8.7 6.0 2.0 1 1 1 2 2 2 0 FAM76 protein HR1 PF02185.16 ORF139901 - 1.4 9.1 11.4 0.91 9.7 5.6 3.3 3 1 0 3 3 3 0 Hr1 repeat ALAD PF00490.21 ORF139876 - 1.4e-136 454.8 0.3 1.6e-136 454.6 0.3 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase ComA PF02679.15 ORF139876 - 0.027 13.9 0.1 0.061 12.8 0.0 1.7 2 1 0 2 2 2 0 (2R)-phospho-3-sulfolactate synthase (ComA) PUB PF09409.10 ORF139339 - 3.4e-14 52.5 0.1 1.4e-13 50.6 0.1 2.0 3 0 0 3 3 3 1 PUB domain UBA PF00627.31 ORF139339 - 3.5e-08 33.2 0.0 6.4e-08 32.3 0.0 1.5 1 0 0 1 1 1 1 UBA/TS-N domain UPF0242 PF06785.11 ORF139339 - 4.5 7.3 19.1 7 6.7 19.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FAM75 PF14650.6 ORF139339 - 9 5.7 11.7 13 5.2 11.7 1.2 1 0 0 1 1 1 0 FAM75 family Ldh_1_N PF00056.23 ORF136587 - 6.7e-37 126.7 0.1 1.2e-36 125.9 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF136587 - 1.7e-28 99.7 0.0 2.5e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain LysR_substrate PF03466.20 ORF13381 - 1.7e-43 148.4 1.3 2.4e-43 147.9 1.3 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF13381 - 3.6e-16 58.9 2.2 4.1e-16 58.7 1.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 ORF13381 - 0.094 12.5 0.5 0.2 11.5 0.5 1.5 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Biotin_carb_C PF02785.19 ORF132454 - 0.0043 17.1 0.0 0.0097 16.0 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Metallophos_2 PF12850.7 ORF132132 - 0.071 13.3 0.1 9 6.5 0.0 2.2 2 0 0 2 2 2 0 Calcineurin-like phosphoesterase superfamily domain TPR_1 PF00515.28 ORF132132 - 0.12 12.2 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat VWA_3 PF13768.6 ORF131483 - 3.9e-22 78.9 0.0 5.3e-22 78.4 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 ORF131483 - 4.8e-16 59.5 0.0 7.3e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF131483 - 3.7e-11 43.6 0.0 6e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain TctC PF03401.14 ORF129845 - 2.7e-58 197.2 0.0 3.4e-58 196.9 0.0 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter family receptor Phosphonate-bd PF12974.7 ORF129845 - 0.096 12.3 0.1 0.81 9.2 0.0 2.0 1 1 0 2 2 2 0 ABC transporter, phosphonate, periplasmic substrate-binding protein Carb_anhydrase PF00194.21 ORF129448 - 1.7e-31 109.7 2.2 4.5e-31 108.3 2.2 1.5 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase CA_like PF10563.9 ORF129448 - 0.19 11.6 2.3 1 9.3 0.2 2.4 1 1 0 2 2 2 0 Putative carbonic anhydrase DUF4834 PF16118.5 ORF118271 - 3 8.9 11.4 4.2 8.4 0.2 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Peptidase_S49_N PF08496.10 ORF118271 - 9 6.3 10.3 26 4.8 0.1 2.6 2 0 0 2 2 2 0 Peptidase family S49 N-terminal NolX PF05819.11 ORF117510 - 0.12 11.7 5.0 0.042 13.2 2.0 1.6 2 0 0 2 2 2 0 NolX protein Ldh_1_N PF00056.23 ORF107885 - 6.7e-37 126.7 0.1 1.2e-36 125.9 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 ORF107885 - 1.7e-28 99.7 0.0 2.5e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Abhydrolase_1 PF00561.20 ORF102227 - 1.2e-10 41.5 0.6 1.5e-05 24.8 0.4 2.7 2 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF102227 - 0.00095 18.5 0.0 2.3 7.4 0.0 3.1 2 1 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 ORF102227 - 0.0073 15.9 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Dienelactone hydrolase family DUF676 PF05057.14 ORF102227 - 0.046 13.2 0.0 0.077 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Myb_DNA-binding PF00249.31 NODE_20466_length_967_cov_160.714592_g15698_i0forward_frame_1 - 1.1e-07 31.9 0.2 2.3e-07 30.9 0.2 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_20466_length_967_cov_160.714592_g15698_i0forward_frame_1 - 2.9e-06 27.4 0.8 7.5e-06 26.1 0.8 1.8 1 0 0 1 1 1 1 Myb-like DNA-binding domain MFS_1 PF07690.16 NODE_20278_length_972_cov_1888.845251_g5316_i3reverse_frame_2 - 3e-34 118.5 20.0 4.5e-34 117.9 20.0 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 NODE_20278_length_972_cov_1888.845251_g5316_i3reverse_frame_2 - 3.5e-08 32.4 14.6 4.9e-08 31.9 14.6 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1_like PF12832.7 NODE_20278_length_972_cov_1888.845251_g5316_i3reverse_frame_2 - 1.1e-06 27.8 20.3 0.00082 18.3 2.4 2.5 1 1 1 2 2 2 2 MFS_1 like family Sugar_tr PF00083.24 NODE_20278_length_972_cov_1888.845251_g5316_i3reverse_frame_2 - 0.00012 21.0 19.7 0.00016 20.7 11.9 2.3 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_Mycoplasma PF07672.13 NODE_20278_length_972_cov_1888.845251_g5316_i3forward_frame_3 - 0.036 13.3 0.1 0.049 12.9 0.1 1.1 1 0 0 1 1 1 0 Mycoplasma MFS transporter Chordopox_A13L PF05961.11 NODE_20278_length_972_cov_1888.845251_g5316_i3forward_frame_3 - 0.045 14.0 1.3 0.069 13.4 0.1 1.9 2 0 0 2 2 2 0 Chordopoxvirus A13L protein DUF3601 PF12208.8 ORF9412 - 0.0074 16.4 0.0 0.016 15.3 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3601) Myb_DNA-binding PF00249.31 ORF91963 - 2.8e-16 59.4 0.9 1e-09 38.4 0.1 3.6 4 0 0 4 4 4 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF91963 - 1.1e-08 35.2 10.3 3.4e-06 27.2 0.3 4.3 3 1 1 4 4 4 3 Myb-like DNA-binding domain P22_AR_C PF10548.9 ORF91963 - 0.0031 17.7 0.1 0.0079 16.3 0.1 1.7 1 0 0 1 1 1 1 P22AR C-terminal domain NAAA-beta PF15508.6 ORF91963 - 0.03 14.6 1.8 0.45 10.9 0.0 3.2 4 0 0 4 4 4 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase zf-RanBP PF00641.18 ORF89863 - 4.1e-16 58.0 19.8 1.5e-09 37.0 4.3 2.5 2 0 0 2 2 2 2 Zn-finger in Ran binding protein and others zinc_ribbon_10 PF10058.9 ORF89863 - 0.028 14.1 1.1 5.9 6.7 0.2 2.6 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein TackOD1 PF18551.1 ORF89863 - 0.036 13.7 4.9 1.8 8.2 0.2 2.2 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 HypA PF01155.19 ORF89863 - 0.054 13.5 4.3 1.1 9.2 0.2 2.3 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbon_6 PF10005.9 ORF89863 - 0.18 12.5 4.7 6.5 7.5 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-MIZ PF02891.20 ORF89863 - 0.3 10.9 4.6 8.6 6.2 0.3 2.4 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger DZR PF12773.7 ORF89863 - 0.31 11.1 13.4 1.4 9.0 13.8 1.9 1 1 1 2 2 2 0 Double zinc ribbon zf-4CXXC_R1 PF10497.9 ORF89863 - 1.5 9.1 15.3 4 7.7 4.2 2.5 1 1 1 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 zf-ACC PF17848.1 ORF89863 - 1.7 8.8 10.0 8 6.6 0.0 3.8 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain DUF35_N PF12172.8 ORF89863 - 2.1 8.3 13.8 0.49 10.3 4.2 2.5 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Ima1_N PF09779.9 ORF89863 - 2.9 8.8 6.4 3.7 8.4 0.5 2.3 2 0 0 2 2 2 0 Ima1 N-terminal domain Rubredoxin_2 PF18073.1 ORF89863 - 4.8 7.0 15.9 4.4 7.1 0.7 4.3 4 0 0 4 4 4 0 Rubredoxin metal binding domain zinc_ribbon_15 PF17032.5 ORF89863 - 7.1 7.5 8.2 26 5.6 8.3 1.8 1 1 1 2 2 2 0 zinc-ribbon family zf-RRN7 PF11781.8 ORF89863 - 9.4 6.0 16.6 1.7 8.4 0.7 3.6 3 1 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-FPG_IleRS PF06827.14 ORF89863 - 9.8 6.1 12.5 10 6.1 0.1 4.1 5 0 0 5 5 5 0 Zinc finger found in FPG and IleRS VWD PF00094.25 ORF87872 - 0.00031 21.1 0.0 0.0021 18.4 0.0 2.2 1 1 0 1 1 1 1 von Willebrand factor type D domain Metallophos PF00149.28 ORF86727 - 2.9e-11 44.3 0.9 4.6e-11 43.6 0.9 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF86727 - 0.048 12.7 0.2 0.17 10.9 0.0 1.8 2 0 0 2 2 2 0 PhoD-like phosphatase Hydrolase_4 PF12146.8 ORF84278 - 1.5e-51 175.0 0.0 1.8e-51 174.7 0.0 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF84278 - 4.9e-11 42.8 0.7 3.5e-06 26.9 0.8 2.4 2 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF84278 - 0.00014 22.6 2.2 0.0002 22.0 2.2 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 ORF84278 - 0.0047 16.6 0.0 0.0061 16.2 0.0 1.3 1 0 0 1 1 1 1 Putative esterase ACT_7 PF13840.6 ORF84278 - 0.052 13.4 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 ACT domain Abhydrolase_2 PF02230.16 ORF84278 - 0.085 12.7 0.2 0.41 10.4 0.1 1.9 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Chlorophyllase2 PF12740.7 ORF84278 - 0.18 10.7 0.0 0.82 8.5 0.0 1.9 2 0 0 2 2 2 0 Chlorophyllase enzyme Peptidase_S9 PF00326.21 ORF84278 - 0.25 10.8 2.1 1.3 8.5 1.0 2.5 2 1 1 3 3 3 0 Prolyl oligopeptidase family THDPS_N_2 PF14805.6 ORF8370 - 0.054 13.7 0.1 0.18 12.1 0.1 2.0 1 1 0 1 1 1 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal EF-hand_like PF09279.11 ORF8370 - 0.27 11.7 1.6 0.36 11.4 0.3 1.9 2 0 0 2 2 2 0 Phosphoinositide-specific phospholipase C, efhand-like ERp29_N PF07912.13 ORF80339 - 5.3e-16 58.9 0.0 1.1e-15 57.9 0.0 1.5 1 0 0 1 1 1 1 ERp29, N-terminal domain ERp29 PF07749.12 ORF80339 - 5.8e-15 56.0 0.6 1e-14 55.2 0.6 1.4 1 0 0 1 1 1 1 Endoplasmic reticulum protein ERp29, C-terminal domain DCP2 PF05026.13 ORF79462 - 0.042 14.2 0.0 0.1 12.9 0.0 1.7 1 0 0 1 1 1 0 Dcp2, box A domain Tad PF13400.6 ORF79462 - 1.4 9.3 10.9 3.2 8.1 2.4 2.8 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Pkinase PF00069.25 ORF77208 - 4.9e-41 140.8 0.0 6.5e-41 140.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF77208 - 4.8e-23 81.8 0.0 6.5e-23 81.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF77208 - 2.3e-07 30.0 0.0 3.3e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF77208 - 0.00063 19.2 0.0 0.081 12.2 0.0 2.1 2 0 0 2 2 2 2 Kinase-like APH PF01636.23 ORF77208 - 0.0065 16.4 0.5 0.0065 16.4 0.5 2.4 2 1 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF77208 - 0.057 12.8 0.0 0.094 12.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Xpo1 PF08389.12 ORF75737 - 0.082 13.0 2.4 8.5 6.4 0.2 2.4 2 0 0 2 2 2 0 Exportin 1-like protein DCP2 PF05026.13 ORF68293 - 0.044 14.1 0.0 0.11 12.9 0.0 1.7 1 0 0 1 1 1 0 Dcp2, box A domain Tad PF13400.6 ORF68293 - 0.44 10.9 11.1 3.2 8.1 2.4 2.8 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Calcyon PF06387.11 ORF68267 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) Calcyon PF06387.11 ORF66920 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) EcKinase PF02958.20 ORF65744 - 0.037 13.3 0.0 0.054 12.8 0.0 1.3 1 0 0 1 1 1 0 Ecdysteroid kinase TetR_C_3 PF08362.11 ORF65744 - 0.09 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 YcdC-like protein, C-terminal region FAST_2 PF08368.12 ORF65744 - 0.17 12.7 0.0 0.52 11.1 0.0 1.8 1 0 0 1 1 1 0 FAST kinase-like protein, subdomain 2 Neurochondrin PF05536.11 ORF62715 - 0.0015 17.0 1.6 0.0024 16.3 0.7 1.8 1 1 0 1 1 1 1 Neurochondrin SWIRM PF04433.17 ORF62715 - 0.02 15.2 1.8 0.14 12.5 0.2 2.5 2 0 0 2 2 2 0 SWIRM domain PCP PF02429.15 ORF62715 - 0.034 14.5 0.4 0.38 11.1 0.2 2.3 2 0 0 2 2 2 0 Peridinin-chlorophyll A binding protein DUF3730 PF12530.8 ORF62715 - 0.054 13.1 0.1 5.8 6.4 0.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3730) DSPc PF00782.20 ORF62715 - 0.068 13.0 0.4 0.068 13.0 0.4 2.3 2 1 1 3 3 3 0 Dual specificity phosphatase, catalytic domain DUF4535 PF15054.6 ORF62715 - 0.18 11.6 0.2 0.18 11.6 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) Calcyon PF06387.11 ORF6069 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) Ribosomal_L3 PF00297.22 ORF56087 - 4.8e-17 62.0 4.9 2.4e-16 59.7 4.9 1.9 1 1 0 1 1 1 1 Ribosomal protein L3 Acetyltransf_6 PF13480.7 ORF53300 - 0.0056 16.8 0.3 0.012 15.8 0.3 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Serinc PF03348.15 ORF52272 - 0.29 10.0 2.5 0.51 9.2 2.5 1.3 1 0 0 1 1 1 0 Serine incorporator (Serinc) SIT PF15330.6 ORF52272 - 2.9 8.4 6.0 1.2 9.6 2.2 2.3 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT MethyTransf_Reg PF10119.9 ORF47987 - 0.0099 16.6 0.1 0.098 13.4 0.0 2.4 3 0 0 3 3 3 1 Predicted methyltransferase regulatory domain Pirin PF02678.16 ORF47495 - 8.9e-21 73.9 0.3 1.4e-20 73.3 0.3 1.3 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 ORF47495 - 7.8e-19 68.0 0.0 1.2e-18 67.4 0.0 1.3 1 0 0 1 1 1 1 Pirin C-terminal cupin domain Calcyon PF06387.11 ORF42103 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) SGT1 PF07093.11 ORF37074 - 0.38 9.1 0.2 0.52 8.7 0.2 1.1 1 0 0 1 1 1 0 SGT1 protein Pkinase PF00069.25 ORF36064 - 5e-53 180.1 0.2 5.9e-53 179.9 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF36064 - 8.4e-28 97.4 0.0 1.1e-27 97.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF36064 - 0.0022 17.4 0.0 0.0056 16.0 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF36064 - 0.022 14.1 0.3 0.036 13.4 0.3 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FAST_1 PF06743.15 ORF33053 - 9.3e-07 28.7 0.3 0.014 15.3 0.1 4.0 3 1 1 4 4 4 2 FAST kinase-like protein, subdomain 1 KIAA1430 PF13879.6 ORF3293 - 6.8 7.5 10.0 23 5.8 5.0 2.6 1 1 0 2 2 2 0 KIAA1430 homologue PALP PF00291.25 ORF3212 - 3.4e-69 233.5 0.3 3.8e-69 233.3 0.3 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DFP PF04127.15 ORF3212 - 0.03 14.1 0.1 0.056 13.3 0.1 1.3 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein ADH_zinc_N PF00107.26 ORF3212 - 0.038 14.0 0.9 0.44 10.5 0.5 2.5 2 1 0 2 2 2 0 Zinc-binding dehydrogenase PG_isomerase_N PF18353.1 ORF3212 - 0.094 13.1 0.0 0.25 11.8 0.0 1.8 1 1 0 1 1 1 0 Phosphoglucose isomerase N-terminal domain EF-hand_6 PF13405.6 ORF30855 - 7.3e-14 50.5 13.4 9.3e-05 22.1 1.7 5.1 4 1 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF30855 - 1.2e-12 48.1 10.5 7.8e-05 23.0 4.1 4.1 2 1 2 4 4 4 4 EF-hand domain pair EF-hand_1 PF00036.32 ORF30855 - 1.5e-12 46.1 15.6 0.00093 18.6 0.3 5.2 5 0 0 5 5 5 4 EF hand EF-hand_5 PF13202.6 ORF30855 - 9.8e-07 28.0 15.0 0.0039 16.6 1.9 4.6 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 ORF30855 - 0.00013 21.8 12.9 0.02 14.7 0.3 4.6 3 2 2 5 5 5 2 EF-hand domain pair Histone_HNS PF00816.21 ORF30855 - 0.0023 18.7 0.2 1.9 9.4 0.0 2.5 2 0 0 2 2 2 2 H-NS histone family Dockerin_1 PF00404.18 ORF30855 - 0.013 15.6 0.2 12 6.1 0.0 3.4 4 0 0 4 4 4 0 Dockerin type I domain EF-hand_9 PF14658.6 ORF30855 - 0.016 15.5 0.0 3.9 7.9 0.0 3.1 4 0 0 4 4 4 0 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF30855 - 0.027 14.8 5.4 0.059 13.7 0.7 3.3 2 2 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF30855 - 0.15 11.9 5.8 1.5 8.7 0.0 3.4 2 1 2 4 4 4 0 Caleosin related protein SUR7 PF06687.12 ORF28957 - 8.3e-05 22.3 2.5 0.0066 16.1 2.5 2.1 1 1 0 1 1 1 1 SUR7/PalI family Sigma_reg_N PF13800.6 ORF28957 - 0.013 15.8 4.9 0.86 9.9 0.2 3.2 3 0 0 3 3 3 0 Sigma factor regulator N-terminal SdpI PF13630.6 ORF28957 - 0.029 14.5 0.1 0.029 14.5 0.1 3.1 3 0 0 3 3 3 0 SdpI/YhfL protein family Orf78 PF06024.12 ORF28957 - 0.07 13.4 2.0 11 6.4 0.0 2.6 3 0 0 3 3 3 0 Orf78 (ac78) MFS_Mycoplasma PF07672.13 ORF28957 - 0.093 12.0 5.3 0.7 9.1 0.1 2.5 3 0 0 3 3 3 0 Mycoplasma MFS transporter DUF2207 PF09972.9 ORF28957 - 0.33 9.7 8.2 4 6.1 0.1 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 ORF28957 - 0.44 10.9 11.1 4.2 7.7 0.4 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) DUF4834 PF16118.5 ORF28957 - 3.9 8.5 11.2 3.1 8.8 0.2 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) KIAA1430 PF13879.6 ORF28205 - 6.8 7.5 10.0 23 5.8 5.0 2.6 1 1 0 2 2 2 0 KIAA1430 homologue # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks54.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks54.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks54.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks54.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CS PF04969.16 ORF27571 - 1.2e-12 48.7 1.5 1.8e-12 48.1 0.5 1.9 2 0 0 2 2 2 1 CS domain Nudc_N PF14050.6 ORF27571 - 1.2e-11 44.4 0.2 2.5e-11 43.4 0.2 1.6 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. BSMAP PF12280.8 ORF27571 - 0.053 13.7 5.3 0.041 14.1 1.0 2.2 2 0 0 2 2 2 0 Brain specific membrane anchored protein DUF3217 PF11506.8 ORF27571 - 0.066 13.2 0.4 0.14 12.1 0.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3217) Hid1 PF12722.7 ORF27571 - 1.1 7.3 7.6 1.8 6.6 7.6 1.3 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein CSRNP_N PF16019.5 ORF27571 - 1.4 8.8 8.3 0.19 11.6 3.6 1.8 2 0 0 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus SOBP PF15279.6 ORF27571 - 1.7 9.2 4.8 0.22 12.1 0.8 1.5 2 0 0 2 2 2 0 Sine oculis-binding protein DCP2 PF05026.13 ORF25795 - 0.042 14.2 0.0 0.1 12.9 0.0 1.7 1 0 0 1 1 1 0 Dcp2, box A domain Tad PF13400.6 ORF25795 - 1.4 9.3 10.9 3.2 8.1 2.4 2.8 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Abhydrolase_1 PF00561.20 ORF19470 - 5.9e-15 55.6 0.0 8.3e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF19470 - 0.17 12.0 0.0 0.36 11.0 0.0 1.5 1 0 0 1 1 1 0 TAP-like protein DCP2 PF05026.13 ORF19099 - 0.042 14.2 0.0 0.1 12.9 0.0 1.7 1 0 0 1 1 1 0 Dcp2, box A domain Tad PF13400.6 ORF19099 - 1.4 9.3 10.9 3.2 8.1 2.4 2.8 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like Cadherin_C_2 PF16492.5 ORF15941 - 0.00024 21.8 3.0 0.0026 18.4 0.0 2.6 2 0 0 2 2 2 1 Cadherin cytoplasmic C-terminal TMEM154 PF15102.6 ORF15941 - 0.0086 16.0 0.4 0.022 14.7 0.1 1.8 1 1 0 1 1 1 1 TMEM154 protein family DUF1184 PF06683.11 ORF15941 - 0.17 11.3 0.9 15 5.0 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1184) Ribosomal_L3 PF00297.22 ORF150562 - 1.7e-19 70.1 7.4 4.3e-17 62.1 4.2 3.0 2 1 1 3 3 3 2 Ribosomal protein L3 Peptidase_A24 PF01478.18 ORF150406 - 2.7e-28 98.5 10.9 2.7e-28 98.5 10.9 2.4 2 1 0 2 2 2 1 Type IV leader peptidase family SPC12 PF06645.13 ORF150406 - 1.2 9.3 16.7 0.086 12.9 1.2 3.8 2 1 2 4 4 4 0 Microsomal signal peptidase 12 kDa subunit (SPC12) Metallophos PF00149.28 ORF149101 - 2.8e-11 44.3 0.9 4.6e-11 43.6 0.9 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PhoD PF09423.10 ORF149101 - 0.072 12.1 0.1 0.17 10.9 0.0 1.6 2 0 0 2 2 2 0 PhoD-like phosphatase KIAA1430 PF13879.6 ORF146264 - 6.8 7.5 10.0 23 5.8 5.0 2.6 1 1 0 2 2 2 0 KIAA1430 homologue Calcyon PF06387.11 ORF144875 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) DUF2892 PF11127.8 ORF140121 - 6.6 6.9 8.2 4.6 7.3 0.5 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2892) Pkinase PF00069.25 ORF139585 - 1.2e-32 113.3 0.3 6.3e-32 111.0 0.3 2.2 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF139585 - 2.4e-15 56.5 0.1 3e-13 49.6 0.1 2.8 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF139585 - 2.8e-06 26.9 0.2 3.4e-05 23.3 0.2 2.2 1 1 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF139585 - 2.2e-05 23.7 0.5 2.2e-05 23.7 0.5 1.9 2 0 0 2 2 2 1 Seadornavirus VP7 Kdo PF06293.14 ORF139585 - 0.015 14.7 0.2 0.025 13.9 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF139585 - 0.021 14.8 0.1 0.034 14.1 0.1 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF139585 - 0.023 14.3 0.1 0.048 13.3 0.1 1.5 1 0 0 1 1 1 0 RIO1 family Calcyon PF06387.11 ORF132413 - 0.081 12.9 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 D1 dopamine receptor-interacting protein (calcyon) Cadherin_C_2 PF16492.5 ORF131466 - 0.00026 21.7 3.0 0.0026 18.4 0.0 2.6 2 0 0 2 2 2 1 Cadherin cytoplasmic C-terminal TMEM154 PF15102.6 ORF131466 - 0.009 15.9 0.4 0.022 14.7 0.1 1.8 1 1 0 1 1 1 1 TMEM154 protein family DUF2462 PF09495.10 ORF130148 - 0.32 11.8 4.7 0.61 10.9 3.8 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2462) PTS_IIB PF02302.17 ORF1271 - 0.068 13.9 0.0 0.11 13.2 0.0 1.3 1 0 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIB subunit DUF4586 PF15239.6 ORF123886 - 1.1e-26 94.8 17.9 1.6e-26 94.2 17.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4586) VWD PF00094.25 ORF123606 - 0.00031 21.1 0.0 0.0021 18.4 0.0 2.2 1 1 0 1 1 1 1 von Willebrand factor type D domain ARTD15_N PF18084.1 ORF122380 - 0.13 12.6 0.0 0.29 11.4 0.0 1.6 1 0 0 1 1 1 0 ARTD15 N-terminal domain Dpy-30 PF05186.13 ORF122328 - 2.7e-09 36.6 0.0 5.1e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 Dpy-30 motif ADK PF00406.22 ORF122328 - 4.7e-06 26.8 0.1 3.3e-05 24.0 0.0 2.2 2 0 0 2 2 2 1 Adenylate kinase Hydin_ADK PF17213.3 ORF122328 - 0.061 13.6 0.2 0.43 10.8 0.0 2.2 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain CS PF04969.16 ORF119975 - 0.0013 19.7 0.5 0.0038 18.2 0.0 2.1 2 1 0 2 2 2 1 CS domain DUF3382 PF11862.8 ORF11436 - 0.062 13.6 0.8 0.12 12.6 0.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3382) DUF192 PF02643.15 ORF106541 - 1.8 8.8 12.4 2.7 8.2 0.8 4.3 4 1 1 5 5 5 0 Uncharacterized ACR, COG1430 Ctr PF04145.15 ORF104780 - 7.5e-08 33.1 5.9 7.5e-08 33.1 5.9 2.2 1 1 1 2 2 2 2 Ctr copper transporter family HMA PF00403.26 ORF104780 - 4.1e-07 30.3 0.2 7.7e-07 29.5 0.2 1.4 1 0 0 1 1 1 1 Heavy-metal-associated domain Peptidase_C1 PF00112.23 ORF102681 - 2.3e-23 83.5 0.2 5.4e-23 82.2 0.2 1.5 1 1 0 1 1 1 1 Papain family cysteine protease SMYLE_N PF18615.1 NODE_20544_length_964_cov_2510.821313_g15768_i0reverse_frame_1 - 0.2 11.2 0.9 0.27 10.7 0.9 1.1 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain PHM7_ext PF12621.8 NODE_20437_length_968_cov_149.132905_g15676_i0reverse_frame_3 - 0.004 17.3 0.5 0.02 15.0 0.1 2.1 2 0 0 2 2 2 1 Extracellular tail, of 10TM putative phosphate transporter RNase_HII PF01351.18 NODE_20437_length_968_cov_149.132905_g15676_i0reverse_frame_2 - 0.098 12.5 3.2 0.21 11.4 0.5 2.2 2 0 0 2 2 2 0 Ribonuclease HII TypeIII_RM_meth PF12564.8 NODE_20430_length_968_cov_234.150054_g15670_i0reverse_frame_2 - 1.4 9.1 7.7 0.19 11.9 0.8 2.7 3 0 0 3 3 3 0 Type III restriction/modification enzyme methylation subunit HlyD_D23 PF16576.5 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 1.1e-13 50.9 6.2 9.6e-12 44.6 6.2 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 7.5e-13 49.1 2.1 9.8e-11 42.3 0.1 2.4 2 0 0 2 2 2 2 HlyD family secretion protein HlyD PF00529.20 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 2.1e-08 33.9 0.1 3.3e-08 33.3 0.1 1.3 1 0 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl_2 PF13533.6 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 8.9e-05 22.2 0.1 8.9e-05 22.2 0.1 2.5 2 1 0 2 2 2 1 Biotin-lipoyl like Orf78 PF06024.12 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.0041 17.4 1.5 0.0083 16.4 0.0 2.0 2 1 0 2 2 2 1 Orf78 (ac78) FixH PF05751.11 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.043 13.8 0.1 0.073 13.1 0.1 1.5 1 0 0 1 1 1 0 FixH N1221 PF07923.13 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.066 12.4 0.1 0.15 11.2 0.0 1.6 2 0 0 2 2 2 0 N1221-like protein DUF2776 PF10951.8 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.095 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) DUF3328 PF11807.8 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.18 11.5 0.1 5.6 6.7 0.0 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF3328) DUF4398 PF14346.6 NODE_20411_length_969_cov_2.880086_g15657_i0reverse_frame_3 - 0.77 10.4 16.1 0.39 11.4 1.4 3.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4398) zf-RING_2 PF13639.6 ORF99977 - 4.1e-10 39.8 6.1 4.1e-10 39.8 6.1 1.7 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF99977 - 2.8e-08 33.9 4.4 2.8e-08 33.9 4.4 2.0 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF99977 - 6.2e-08 32.4 6.3 1.4e-07 31.2 6.3 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF99977 - 1e-05 25.3 3.9 1e-05 25.3 3.9 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF99977 - 7.2e-05 22.4 1.9 0.00022 20.9 1.9 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF99977 - 0.00024 20.9 7.2 0.00024 20.9 7.2 1.8 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF99977 - 0.00025 21.1 3.6 0.00055 19.9 3.3 1.7 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF99977 - 0.00093 19.1 6.0 0.00093 19.1 6.0 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF99977 - 0.00096 19.1 3.6 0.00096 19.1 3.6 1.9 2 0 0 2 2 1 1 RING-type zinc-finger Spc7 PF08317.11 ORF99977 - 0.0016 17.3 26.8 0.011 14.7 17.8 2.4 2 1 1 3 3 3 2 Spc7 kinetochore protein Zn_ribbon_17 PF17120.5 ORF99977 - 0.0017 17.9 4.3 0.0036 16.9 3.9 1.7 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type DUF3450 PF11932.8 ORF99977 - 0.0082 15.5 7.3 0.0082 15.5 7.3 3.0 2 1 1 3 3 3 1 Protein of unknown function (DUF3450) zf-RING_4 PF14570.6 ORF99977 - 0.029 14.2 3.5 0.029 14.2 3.5 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain DUF3552 PF12072.8 ORF99977 - 0.057 12.8 45.1 0.15 11.4 20.0 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) RINGv PF12906.7 ORF99977 - 0.18 12.0 6.2 0.59 10.3 6.2 1.9 1 1 0 1 1 1 0 RING-variant domain C8 PF08742.11 ORF99977 - 0.19 12.2 4.3 9.4 6.7 0.0 2.4 2 0 0 2 2 2 0 C8 domain Prok-RING_4 PF14447.6 ORF99977 - 0.22 11.4 4.9 0.69 9.8 4.9 1.9 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 DUF4200 PF13863.6 ORF99977 - 0.51 10.7 40.4 1.5 9.3 10.6 4.1 1 1 4 5 5 5 0 Domain of unknown function (DUF4200) FANCL_C PF11793.8 ORF99977 - 0.93 9.7 6.5 8.6 6.6 6.2 2.6 1 1 0 1 1 1 0 FANCL C-terminal domain GAS PF13851.6 ORF99977 - 3.1 7.1 34.4 21 4.4 0.1 3.1 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Atg14 PF10186.9 ORF99977 - 3.5 6.6 42.5 1.2e+02 1.5 42.5 2.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TPR_MLP1_2 PF07926.12 ORF99977 - 4.5 7.4 32.6 10 6.2 28.9 3.1 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DZR PF12773.7 ORF99977 - 7 6.8 7.9 9.4 6.3 0.4 2.9 2 1 1 3 3 3 0 Double zinc ribbon zf-C3HC4_4 PF15227.6 ORF99977 - 8.7 6.6 7.5 0.72 10.1 2.1 2.1 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING Mito_carr PF00153.27 ORF95269 - 1.3e-63 211.0 1.3 6.2e-20 70.9 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein HECT PF00632.25 ORF94522 - 9e-62 209.3 0.3 1.1e-61 209.1 0.3 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Peptidase_C1 PF00112.23 ORF94227 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF94227 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF94227 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF94227 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF94227 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF94227 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF94227 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain zf-RING_2 PF13639.6 ORF93791 - 4.1e-10 39.8 6.1 4.1e-10 39.8 6.1 1.7 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF93791 - 2.8e-08 33.9 4.4 2.8e-08 33.9 4.4 2.0 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF93791 - 6.2e-08 32.4 6.3 1.4e-07 31.2 6.3 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF93791 - 1e-05 25.3 3.9 1e-05 25.3 3.9 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF93791 - 7.2e-05 22.4 1.9 0.00022 20.9 1.9 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF93791 - 0.00024 20.9 7.2 0.00024 20.9 7.2 1.8 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF93791 - 0.00025 21.1 3.6 0.00055 19.9 3.3 1.7 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF93791 - 0.00093 19.1 6.0 0.00093 19.1 6.0 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF93791 - 0.00096 19.1 3.6 0.00096 19.1 3.6 1.9 2 0 0 2 2 1 1 RING-type zinc-finger Spc7 PF08317.11 ORF93791 - 0.0016 17.3 26.8 0.011 14.7 17.8 2.4 2 1 1 3 3 3 2 Spc7 kinetochore protein Zn_ribbon_17 PF17120.5 ORF93791 - 0.0017 17.9 4.3 0.0036 16.9 3.9 1.7 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type DUF3450 PF11932.8 ORF93791 - 0.0082 15.5 7.3 0.0082 15.5 7.3 3.0 2 1 1 3 3 3 1 Protein of unknown function (DUF3450) zf-RING_4 PF14570.6 ORF93791 - 0.029 14.2 3.5 0.029 14.2 3.5 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain DUF3552 PF12072.8 ORF93791 - 0.057 12.8 45.1 0.15 11.4 20.0 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) RINGv PF12906.7 ORF93791 - 0.18 12.0 6.2 0.59 10.3 6.2 1.9 1 1 0 1 1 1 0 RING-variant domain C8 PF08742.11 ORF93791 - 0.19 12.2 4.3 9.4 6.7 0.0 2.4 2 0 0 2 2 2 0 C8 domain Prok-RING_4 PF14447.6 ORF93791 - 0.22 11.4 4.9 0.69 9.8 4.9 1.9 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 DUF4200 PF13863.6 ORF93791 - 0.51 10.7 40.4 1.5 9.3 10.6 4.1 1 1 4 5 5 5 0 Domain of unknown function (DUF4200) FANCL_C PF11793.8 ORF93791 - 0.93 9.7 6.5 8.6 6.6 6.2 2.6 1 1 0 1 1 1 0 FANCL C-terminal domain GAS PF13851.6 ORF93791 - 3.1 7.1 34.4 21 4.4 0.1 3.1 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Atg14 PF10186.9 ORF93791 - 3.5 6.6 42.5 1.2e+02 1.5 42.5 2.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TPR_MLP1_2 PF07926.12 ORF93791 - 4.5 7.4 32.6 10 6.2 28.9 3.1 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DZR PF12773.7 ORF93791 - 7 6.8 7.9 9.4 6.3 0.4 2.9 2 1 1 3 3 3 0 Double zinc ribbon zf-C3HC4_4 PF15227.6 ORF93791 - 8.7 6.6 7.5 0.72 10.1 2.1 2.1 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING RCC1_2 PF13540.6 ORF93402 - 2.8e-53 176.7 47.3 3.9e-10 39.2 3.0 7.1 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 ORF93402 - 3.2e-08 34.1 54.6 0.068 13.8 0.3 11.6 8 4 1 9 9 9 6 Regulator of chromosome condensation (RCC1) repeat Peptidase_C58 PF03543.14 ORF93402 - 0.023 14.4 0.6 23 4.6 0.0 4.1 3 2 3 6 6 6 0 Yersinia/Haemophilus virulence surface antigen Kelch_6 PF13964.6 ORF93402 - 3.1 8.2 8.5 1e+02 3.4 0.1 4.7 5 0 0 5 5 5 0 Kelch motif Pro_isomerase PF00160.21 ORF90600 - 8.6e-49 165.8 0.2 1.5e-48 165.1 0.2 1.4 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TPR_1 PF00515.28 ORF90600 - 1.9e-06 27.4 0.1 0.0052 16.6 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF90600 - 5e-05 23.1 0.0 0.001 19.0 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF90600 - 0.012 15.7 0.1 0.072 13.3 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Desmo_N PF06771.11 ORF90600 - 0.047 14.1 0.1 0.099 13.0 0.1 1.6 1 1 0 1 1 1 0 Viral Desmoplakin N-terminus TPR_11 PF13414.6 ORF90600 - 0.11 12.1 1.0 29 4.5 0.0 3.2 3 0 0 3 3 3 0 TPR repeat Fis1_TPR_C PF14853.6 ORF90600 - 0.12 12.5 0.0 0.55 10.3 0.0 2.0 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat Radical_SAM_C PF16199.5 ORF85919 - 2e-31 107.8 0.1 3.6e-31 107.0 0.1 1.5 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Acetyltransf_1 PF00583.25 ORF85919 - 1.5e-13 51.0 0.1 2.8e-13 50.1 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Radical_SAM PF04055.21 ORF85919 - 5.7e-09 36.6 0.1 1.1e-07 32.4 0.0 2.5 3 0 0 3 3 3 1 Radical SAM superfamily Acetyltransf_10 PF13673.7 ORF85919 - 2.9e-06 27.2 0.1 8e-06 25.8 0.2 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF85919 - 0.0004 20.7 0.0 0.0007 20.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF85919 - 0.18 11.8 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein MORN PF02493.20 ORF85425 - 1.1e-23 81.7 41.1 6.9e-06 25.6 2.3 7.3 7 0 0 7 7 7 6 MORN repeat 2OG-FeII_Oxy_3 PF13640.6 ORF82937 - 1.3e-11 45.2 0.1 8.1e-11 42.7 0.0 2.2 2 1 1 3 3 3 1 2OG-Fe(II) oxygenase superfamily T2SS_PulS_OutS PF09691.10 ORF81452 - 0.013 15.7 0.1 0.32 11.2 0.0 2.4 2 0 0 2 2 2 0 Type II secretion system pilotin lipoprotein (PulS_OutS) SLAM PF06214.11 ORF81452 - 0.09 12.8 0.1 0.24 11.4 0.1 1.6 1 0 0 1 1 1 0 Signaling lymphocytic activation molecule (SLAM) protein MFS_1 PF07690.16 ORF77304 - 4.2e-30 104.9 44.9 4.2e-30 104.9 44.9 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF77304 - 0.5 9.2 44.8 0.038 12.9 10.8 2.1 1 1 1 2 2 2 0 Sugar (and other) transporter EIIC-GAT PF03611.14 ORF77304 - 0.52 9.4 33.7 0.036 13.2 11.2 3.2 1 1 1 3 3 3 0 PTS system sugar-specific permease component MORN PF02493.20 ORF73894 - 7e-45 148.3 78.9 6.8e-08 32.0 0.5 10.2 12 0 0 12 12 12 8 MORN repeat DUF3048_C PF17479.2 ORF73894 - 0.015 15.7 20.8 2.7 8.4 1.5 5.3 1 1 5 6 6 6 0 Protein of unknown function (DUF3048) C-terminal domain DUF448 PF04296.13 ORF73894 - 1.1 9.1 8.8 37 4.3 0.2 4.9 3 1 2 5 5 5 0 Protein of unknown function (DUF448) Rib PF08428.10 ORF73894 - 1.2 9.2 9.2 79 3.3 4.1 4.4 2 1 1 3 3 3 0 Rib/alpha-like repeat Peptidase_C1 PF00112.23 ORF7367 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF7367 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF7367 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF7367 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF7367 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF7367 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF7367 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Peptidase_C1 PF00112.23 ORF71461 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF71461 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF71461 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF71461 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF71461 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF71461 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF71461 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Filament PF00038.21 ORF65048 - 0.028 14.0 26.7 0.028 14.0 5.1 2.2 2 0 0 2 2 2 0 Intermediate filament protein Peptidase_S46 PF10459.9 ORF65048 - 1.9 7.1 16.1 2.8 6.5 16.1 1.3 1 0 0 1 1 1 0 Peptidase S46 DUF4407 PF14362.6 ORF65048 - 3.7 6.8 33.9 6.4 6.0 32.1 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Ribosomal_L10 PF00466.20 ORF61490 - 2.8e-23 81.9 0.1 4.8e-23 81.2 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 ORF61490 - 3.3e-21 75.1 0.0 5.7e-21 74.3 0.0 1.4 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 ORF61490 - 4.1e-09 36.9 4.0 7.1e-09 36.1 3.3 1.8 2 0 0 2 2 2 1 60s Acidic ribosomal protein MFS_1 PF07690.16 ORF58906 - 5.7e-12 45.2 15.5 5.7e-12 45.2 15.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Fer2 PF00111.27 ORF55154 - 1.5e-14 53.7 2.5 3.3e-14 52.6 2.5 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain FAD_binding_6 PF00970.24 ORF55154 - 7.1e-08 32.7 0.0 1.3e-07 31.8 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 ORF55154 - 7.5e-08 33.0 0.0 4.4e-07 30.5 0.0 2.1 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain Fer2_3 PF13085.6 ORF55154 - 0.29 11.2 1.4 0.59 10.2 1.4 1.5 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain Ank_2 PF12796.7 ORF5343 - 2.7e-05 24.7 0.1 4.9e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF5343 - 5.1e-05 23.7 0.4 0.00015 22.2 0.2 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF5343 - 0.00048 20.4 1.0 0.41 11.4 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF5343 - 0.0048 17.2 0.1 0.014 15.7 0.1 1.9 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF5343 - 0.016 15.6 0.3 0.2 12.2 0.0 2.4 2 0 0 2 2 2 0 Ankyrin repeat Lipase_GDSL_2 PF13472.6 ORF53357 - 1.3e-14 55.0 0.1 2e-14 54.4 0.1 1.3 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family CBM_20 PF00686.19 ORF53357 - 2.7e-11 43.2 0.0 5.5e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Starch binding domain B12-binding PF02310.19 ORF53357 - 0.00032 20.7 0.0 0.00075 19.5 0.0 1.5 1 1 0 1 1 1 1 B12 binding domain Lipase_GDSL PF00657.22 ORF53357 - 0.0072 16.3 0.0 0.016 15.1 0.0 1.6 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase RIIa PF02197.17 ORF53357 - 0.012 15.2 0.0 0.034 13.8 0.0 1.8 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit RabGAP-TBC PF00566.18 ORF52188 - 3.3e-43 147.9 3.5 3.3e-43 147.9 3.5 1.4 2 0 0 2 2 2 1 Rab-GTPase-TBC domain Ricin_B_lectin PF00652.22 ORF46886 - 1.2e-19 70.8 6.5 2.5e-19 69.8 6.5 1.5 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF46886 - 4.4e-14 53.0 10.5 3.5e-08 34.1 0.5 2.4 1 1 2 3 3 3 3 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 ORF46886 - 0.001 18.7 0.4 0.0032 17.1 0.2 1.9 1 1 0 1 1 1 1 Cytolethal distending toxin A/C domain CIDR1_gamma PF18562.1 ORF46886 - 5.8 7.1 6.9 40 4.4 0.1 3.4 3 0 0 3 3 3 0 Cysteine-Rich Interdomain Region 1 gamma Pkinase PF00069.25 ORF41334 - 9.1e-26 90.8 0.0 1.6e-25 90.0 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain EF-hand_1 PF00036.32 ORF41334 - 3.6e-22 76.2 16.7 1.3e-06 27.6 0.7 4.9 5 0 0 5 5 5 4 EF hand EF-hand_7 PF13499.6 ORF41334 - 1.9e-19 69.9 11.2 5.8e-10 39.5 0.5 2.7 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF41334 - 3.3e-17 60.9 19.0 1.3e-05 24.7 1.7 5.0 2 2 1 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF41334 - 3.9e-17 60.9 13.0 4.1e-05 22.9 1.6 5.0 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF41334 - 1.1e-15 57.2 10.0 1.2e-08 34.6 0.3 4.4 3 1 1 4 4 4 4 EF-hand domain pair Pkinase_Tyr PF07714.17 ORF41334 - 1.5e-09 37.5 0.0 3.1e-09 36.5 0.0 1.6 1 1 0 1 1 1 1 Protein tyrosine kinase SPARC_Ca_bdg PF10591.9 ORF41334 - 2.7e-07 30.9 5.2 0.0039 17.5 0.3 2.6 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF41334 - 0.00049 20.4 0.9 0.11 12.9 0.0 3.8 4 1 0 4 4 3 1 EF-hand domain Kinase-like PF14531.6 ORF41334 - 0.00099 18.5 0.0 0.0016 17.8 0.0 1.3 1 0 0 1 1 1 1 Kinase-like EF-hand_13 PF17958.1 ORF41334 - 0.022 14.5 0.1 0.77 9.6 0.0 3.2 3 1 1 4 4 4 0 EF-hand domain Caleosin PF05042.13 ORF41334 - 0.028 14.3 2.6 1.2 9.0 0.3 3.0 1 1 2 3 3 3 0 Caleosin related protein EF-hand_4 PF12763.7 ORF41334 - 0.059 13.3 7.1 1.9 8.5 0.4 3.1 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Herpes_UL36 PF03586.13 ORF41334 - 0.084 12.2 0.1 0.33 10.2 0.1 1.8 1 1 1 2 2 2 0 Herpesvirus UL36 tegument protein JHY PF15261.6 ORF39681 - 3.6e-10 40.7 5.5 3.6e-10 40.7 5.5 3.1 2 1 1 3 3 3 1 Jhy protein Ricin_B_lectin PF00652.22 ORF3280 - 1.2e-19 70.8 6.5 2.5e-19 69.8 6.5 1.5 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF3280 - 4.4e-14 53.0 10.5 3.5e-08 34.1 0.5 2.4 1 1 2 3 3 3 3 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 ORF3280 - 0.001 18.7 0.4 0.0032 17.1 0.2 1.9 1 1 0 1 1 1 1 Cytolethal distending toxin A/C domain CIDR1_gamma PF18562.1 ORF3280 - 5.8 7.1 6.9 40 4.4 0.1 3.4 3 0 0 3 3 3 0 Cysteine-Rich Interdomain Region 1 gamma PQ-loop PF04193.14 ORF3103 - 3.3e-15 55.6 19.2 1.3e-10 40.9 2.3 4.1 3 1 1 4 4 4 2 PQ loop repeat zf-RING_2 PF13639.6 ORF30391 - 3.1e-12 46.6 9.5 5e-12 46.0 9.5 1.3 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF30391 - 6.6e-08 32.2 5.2 1.2e-07 31.4 5.2 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF30391 - 4.6e-07 29.6 11.3 8e-07 28.8 11.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF30391 - 8.8e-07 28.7 9.4 1.6e-06 27.9 9.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF30391 - 1.8e-06 28.1 10.3 6.6e-06 26.3 10.3 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF30391 - 0.00086 19.2 11.0 0.0014 18.6 11.0 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF30391 - 0.0017 18.2 8.1 0.0027 17.5 8.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF30391 - 0.0017 18.3 5.2 0.0052 16.8 5.2 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF30391 - 0.0046 16.6 8.0 0.0077 15.8 8.0 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 ORF30391 - 0.0049 16.9 6.1 0.01 15.9 6.1 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-HC5HC2H PF13771.6 ORF30391 - 0.04 14.2 5.3 0.087 13.1 5.3 1.6 1 0 0 1 1 1 0 PHD-like zinc-binding domain zf-C3H2C3 PF17122.5 ORF30391 - 0.05 13.6 10.1 0.096 12.7 10.1 1.5 1 0 0 1 1 1 0 Zinc-finger GAGA PF09237.11 ORF30391 - 0.057 13.2 0.9 0.057 13.2 0.9 2.3 3 0 0 3 3 3 0 GAGA factor 7TMR-HDED PF07697.11 ORF30391 - 0.065 13.3 1.6 1.8 8.6 0.0 2.3 2 0 0 2 2 2 0 7TM-HD extracellular Prok-RING_4 PF14447.6 ORF30391 - 0.086 12.7 7.0 0.21 11.5 7.2 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF30391 - 0.46 10.7 8.7 1.4 9.2 8.7 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING-like PF08746.11 ORF30391 - 0.77 10.1 10.2 1.4 9.3 10.2 1.5 1 0 0 1 1 1 0 RING-like domain RINGv PF12906.7 ORF30391 - 1.2 9.4 7.1 2.7 8.2 7.1 1.6 1 1 0 1 1 1 0 RING-variant domain HisG PF01634.18 ORF29363 - 2.6e-48 164.0 0.0 3.5e-48 163.6 0.0 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 ORF29363 - 1.4e-24 86.1 0.0 2.7e-24 85.1 0.0 1.5 1 0 0 1 1 1 1 HisG, C-terminal domain AIRS_C PF02769.22 ORF24057 - 4.7e-26 91.8 2.7 8.8e-26 90.9 2.7 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF24057 - 4.6e-16 59.2 0.6 1.2e-15 57.9 0.6 1.7 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Peptidase_C1 PF00112.23 ORF22977 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF22977 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF22977 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF22977 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF22977 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF22977 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF22977 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain zf-RING_2 PF13639.6 ORF21261 - 4.1e-10 39.8 6.1 4.1e-10 39.8 6.1 1.7 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF21261 - 2.8e-08 33.9 4.4 2.8e-08 33.9 4.4 2.0 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF21261 - 6.2e-08 32.4 6.3 1.4e-07 31.2 6.3 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF21261 - 1e-05 25.3 3.9 1e-05 25.3 3.9 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF21261 - 7.2e-05 22.4 1.9 0.00022 20.9 1.9 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF21261 - 0.00024 20.9 7.2 0.00024 20.9 7.2 1.8 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF21261 - 0.00025 21.1 3.6 0.00055 19.9 3.3 1.7 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF21261 - 0.00093 19.1 6.0 0.00093 19.1 6.0 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF21261 - 0.00096 19.1 3.6 0.00096 19.1 3.6 1.9 2 0 0 2 2 1 1 RING-type zinc-finger Spc7 PF08317.11 ORF21261 - 0.0016 17.3 26.8 0.011 14.7 17.8 2.4 2 1 1 3 3 3 2 Spc7 kinetochore protein Zn_ribbon_17 PF17120.5 ORF21261 - 0.0017 17.9 4.3 0.0036 16.9 3.9 1.7 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type DUF3450 PF11932.8 ORF21261 - 0.0082 15.5 7.3 0.0082 15.5 7.3 3.0 2 1 1 3 3 3 1 Protein of unknown function (DUF3450) zf-RING_4 PF14570.6 ORF21261 - 0.029 14.2 3.5 0.029 14.2 3.5 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain DUF3552 PF12072.8 ORF21261 - 0.057 12.8 45.1 0.15 11.4 20.0 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) RINGv PF12906.7 ORF21261 - 0.18 12.0 6.2 0.59 10.3 6.2 1.9 1 1 0 1 1 1 0 RING-variant domain C8 PF08742.11 ORF21261 - 0.19 12.2 4.3 9.4 6.7 0.0 2.4 2 0 0 2 2 2 0 C8 domain Prok-RING_4 PF14447.6 ORF21261 - 0.22 11.4 4.9 0.69 9.8 4.9 1.9 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 DUF4200 PF13863.6 ORF21261 - 0.51 10.7 40.4 1.5 9.3 10.6 4.1 1 1 4 5 5 5 0 Domain of unknown function (DUF4200) FANCL_C PF11793.8 ORF21261 - 0.93 9.7 6.5 8.6 6.6 6.2 2.6 1 1 0 1 1 1 0 FANCL C-terminal domain GAS PF13851.6 ORF21261 - 3.1 7.1 34.4 21 4.4 0.1 3.1 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Atg14 PF10186.9 ORF21261 - 3.5 6.6 42.5 1.2e+02 1.5 42.5 2.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TPR_MLP1_2 PF07926.12 ORF21261 - 4.5 7.4 32.6 10 6.2 28.9 3.1 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DZR PF12773.7 ORF21261 - 7 6.8 7.9 9.4 6.3 0.4 2.9 2 1 1 3 3 3 0 Double zinc ribbon zf-C3HC4_4 PF15227.6 ORF21261 - 8.7 6.6 7.5 0.72 10.1 2.1 2.1 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING JHY PF15261.6 ORF17900 - 3.6e-10 40.7 5.5 3.6e-10 40.7 5.5 3.1 2 1 1 3 3 3 1 Jhy protein RCC1_2 PF13540.6 ORF16305 - 1.4e-50 168.2 41.7 2.5e-11 43.0 0.7 7.1 7 0 0 7 7 7 6 Regulator of chromosome condensation (RCC1) repeat PQQ_3 PF13570.6 ORF16305 - 4.3e-05 23.9 3.7 4.6 7.8 0.1 5.8 6 1 0 6 6 6 2 PQQ-like domain Kelch_6 PF13964.6 ORF16305 - 0.0001 22.5 11.1 16 5.9 0.0 6.1 6 0 0 6 6 6 3 Kelch motif RCC1 PF00415.18 ORF16305 - 0.0014 19.2 46.0 1.4 9.6 3.2 10.1 7 5 1 8 8 8 3 Regulator of chromosome condensation (RCC1) repeat Kelch_4 PF13418.6 ORF16305 - 0.0027 17.7 16.3 4.6 7.3 0.0 5.8 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF16305 - 1.9 8.5 11.3 2.8 8.0 0.0 4.6 5 0 0 5 5 5 0 Kelch motif Peptidase_C1 PF00112.23 ORF150424 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF150424 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF150424 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF150424 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF150424 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF150424 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF150424 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Peptidase_C1 PF00112.23 ORF149077 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF149077 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF149077 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF149077 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF149077 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF149077 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF149077 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain FlgI PF02119.16 ORF148897 - 7.8e-113 376.9 11.0 8.9e-113 376.7 11.0 1.0 1 0 0 1 1 1 1 Flagellar P-ring protein DUF3869 PF12985.7 ORF148897 - 0.45 10.9 3.8 0.32 11.4 0.7 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF3869) Peptidase_C1 PF00112.23 ORF143937 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF143937 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF143937 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF143937 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF143937 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF143937 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF143937 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain PhoLip_ATPase_C PF16212.5 ORF142785 - 2.3e-42 145.5 34.6 2.7e-42 145.3 34.6 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal YrhK PF14145.6 ORF142785 - 0.0023 17.8 1.5 0.009 15.9 1.5 2.0 1 0 0 1 1 1 1 YrhK-like protein Transketolase_C PF02780.20 ORF142600 - 0.14 12.1 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Transketolase, C-terminal domain Ricin_B_lectin PF00652.22 ORF139865 - 1.2e-19 70.8 6.5 2.5e-19 69.8 6.5 1.5 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 ORF139865 - 4.4e-14 53.0 10.5 3.5e-08 34.1 0.5 2.4 1 1 2 3 3 3 3 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 ORF139865 - 0.001 18.7 0.4 0.0032 17.1 0.2 1.9 1 1 0 1 1 1 1 Cytolethal distending toxin A/C domain CIDR1_gamma PF18562.1 ORF139865 - 5.8 7.1 6.9 40 4.4 0.1 3.4 3 0 0 3 3 3 0 Cysteine-Rich Interdomain Region 1 gamma CBP_GIL PF10995.8 ORF138189 - 4.1e-106 355.7 0.0 4.8e-106 355.5 0.0 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis GIL Pkinase PF00069.25 ORF135930 - 3.4e-82 275.8 0.0 4.2e-82 275.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF135930 - 4.9e-41 140.7 0.0 6.2e-41 140.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF135930 - 2.9e-05 23.5 0.0 7e-05 22.3 0.0 1.6 2 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF135930 - 0.0017 17.7 0.0 0.0027 17.1 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family ABC1 PF03109.16 ORF135930 - 0.016 15.4 0.1 0.033 14.3 0.1 1.5 1 0 0 1 1 1 0 ABC1 family APH PF01636.23 ORF135930 - 0.017 15.1 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 ORF135930 - 0.029 13.9 0.0 0.061 12.8 0.0 1.5 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF135930 - 0.065 12.0 0.0 0.083 11.6 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase PQ-loop PF04193.14 ORF133313 - 3.3e-15 55.6 19.2 1.3e-10 40.9 2.3 4.1 3 1 1 4 4 4 2 PQ loop repeat Fer4_6 PF12837.7 ORF130205 - 0.027 14.5 0.4 0.027 14.5 0.4 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4 PF00037.27 ORF130205 - 6.1 6.8 10.1 0.66 9.9 0.8 3.6 3 0 0 3 3 3 0 4Fe-4S binding domain Peptidase_C1 PF00112.23 ORF12596 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF12596 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF12596 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF12596 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF12596 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF12596 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF12596 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Peptidase_C1 PF00112.23 ORF124389 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF124389 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF124389 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF124389 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF124389 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF124389 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF124389 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain Peptidase_C1 PF00112.23 ORF123869 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF123869 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF123869 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF123869 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF123869 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF123869 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF123869 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain PQ-loop PF04193.14 ORF120682 - 3.5e-15 55.5 19.4 1.3e-10 40.9 2.3 4.1 3 1 1 4 4 4 2 PQ loop repeat CPP1-like PF11833.8 ORF12067 - 5.7e-10 39.2 1.8 1.7e-09 37.6 1.8 1.8 1 1 0 1 1 1 1 Protein CHAPERONE-LIKE PROTEIN OF POR1-like RepC PF06504.11 ORF12067 - 0.017 14.3 0.0 0.025 13.8 0.0 1.1 1 0 0 1 1 1 0 Replication protein C (RepC) Peptidase_U4 PF03419.13 ORF12067 - 0.031 13.6 0.8 0.064 12.5 0.8 1.5 1 0 0 1 1 1 0 Sporulation factor SpoIIGA PQ-loop PF04193.14 ORF117735 - 3.3e-15 55.6 19.2 1.3e-10 40.9 2.3 4.1 3 1 1 4 4 4 2 PQ loop repeat IFT57 PF10498.9 ORF112719 - 1.8e-29 102.9 17.1 2.8e-29 102.2 17.1 1.3 1 1 0 1 1 1 1 Intra-flagellar transport protein 57 FlaC_arch PF05377.11 ORF112719 - 0.014 15.8 0.4 0.014 15.8 0.4 3.6 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) TraF_2 PF13729.6 ORF112719 - 0.2 11.0 6.0 0.19 11.1 2.0 2.3 1 1 1 2 2 2 0 F plasmid transfer operon, TraF, protein FliD_N PF02465.18 ORF112719 - 0.22 12.2 8.7 7.1 7.4 0.3 3.8 1 1 2 3 3 3 0 Flagellar hook-associated protein 2 N-terminus Seryl_tRNA_N PF02403.22 ORF112719 - 1.2 9.3 10.3 0.13 12.5 3.6 2.6 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DHR10 PF18595.1 ORF112719 - 9.1 6.4 12.2 0.26 11.3 0.6 3.1 2 1 1 3 3 3 0 Designed helical repeat protein 10 domain DUF4806 PF16064.5 ORF110145 - 0.0015 18.8 0.3 0.009 16.3 0.1 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4806) DUF2089 PF09862.9 ORF110145 - 0.68 10.0 5.2 0.48 10.5 1.2 2.7 2 1 1 4 4 4 0 Protein of unknown function (DUF2089) Peptidase_C1 PF00112.23 ORF106925 - 2.2e-57 194.7 13.9 3e-57 194.2 13.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF106925 - 4.1e-13 49.5 1.3 8e-13 48.6 1.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF106925 - 7.5e-08 31.6 0.9 0.00013 20.9 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C39_2 PF13529.6 ORF106925 - 0.097 13.2 3.6 0.39 11.3 3.4 2.1 1 1 0 1 1 1 0 Peptidase_C39 like family Phosphatase PF15698.5 ORF106925 - 0.12 11.5 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphatase HECT_2 PF09814.9 ORF106925 - 0.18 10.6 2.1 0.39 9.5 0.5 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding NifU PF01106.17 ORF106925 - 1.3 9.2 0.0 1.3 9.2 0.0 2.4 2 1 1 3 3 3 0 NifU-like domain PQ-loop PF04193.14 ORF10430 - 3.3e-15 55.6 19.2 1.3e-10 40.9 2.3 4.1 3 1 1 4 4 4 2 PQ loop repeat Taxilin PF09728.9 ORF104017 - 1.6e-05 24.2 31.2 1.6e-05 24.2 31.2 3.0 1 1 1 2 2 2 1 Myosin-like coiled-coil protein PilJ PF13675.6 ORF104017 - 0.046 13.7 5.1 3.9 7.5 0.0 3.4 2 1 1 3 3 3 0 Type IV pili methyl-accepting chemotaxis transducer N-term DASH_Dam1 PF08653.10 ORF104017 - 0.59 10.0 3.7 1.7 8.5 0.0 3.4 3 1 1 4 4 4 0 DASH complex subunit Dam1 ABC_tran PF00005.27 ORF100556 - 1.4e-28 100.1 0.0 3e-28 99.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF100556 - 1e-05 25.5 1.1 0.0023 17.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 ORF100556 - 0.01 16.3 0.0 0.019 15.3 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF100556 - 0.013 15.5 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 ORF100556 - 0.014 15.1 0.1 0.031 14.0 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SbcCD_C PF13558.6 ORF100556 - 0.067 13.4 0.4 1.1 9.5 0.2 2.6 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 ORF100556 - 0.13 12.8 2.1 0.15 12.6 0.3 1.9 1 1 1 2 2 2 0 AAA domain T2SSE PF00437.20 ORF100556 - 0.16 11.0 0.1 0.3 10.1 0.1 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein Metallophos PF00149.28 NODE_20639_length_961_cov_191.249460_g15842_i0forward_frame_1 - 3.8e-31 109.2 0.3 5.4e-31 108.7 0.3 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF918 PF06033.11 NODE_20593_length_963_cov_4.289871_g15804_i0reverse_frame_1 - 0.25 11.4 0.3 0.4 10.7 0.3 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF918) Auxin_canalis PF05703.11 NODE_20493_length_966_cov_210.387755_g15722_i0forward_frame_3 - 0.42 10.5 4.7 0.051 13.5 0.7 1.5 2 0 0 2 2 2 0 Auxin canalisation Metallophos PF00149.28 ORF99738 - 5.4e-19 69.5 0.0 7e-19 69.1 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Ion_trans PF00520.31 ORF97049 - 3.8e-13 49.2 13.1 5.2e-13 48.8 13.1 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF97049 - 8.2e-11 40.7 0.2 6.9e-07 28.4 0.0 2.6 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF97049 - 1.8e-09 36.8 0.0 2.6e-05 23.8 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF97049 - 2e-09 37.8 1.6 4.4e-05 23.8 0.1 2.6 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF97049 - 8.5e-07 28.2 0.1 8.7e-05 21.8 0.1 2.6 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF97049 - 0.00019 21.2 0.2 0.018 14.8 0.1 2.4 2 0 0 2 2 2 1 EF-hand domain pair PKD_channel PF08016.12 ORF97049 - 9.6 4.8 11.2 20 3.7 11.1 1.6 1 1 0 1 1 1 0 Polycystin cation channel Methyltransf_25 PF13649.6 ORF89988 - 1.9e-07 31.7 0.0 5.5e-07 30.2 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF89988 - 2e-05 24.5 0.0 3.1e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF89988 - 6.7e-05 23.5 0.0 0.00018 22.1 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF89988 - 0.0086 16.8 0.0 0.028 15.1 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain DHHC PF01529.20 ORF86439 - 5.7e-28 97.7 14.7 5.7e-28 97.7 14.7 2.5 2 1 0 2 2 2 1 DHHC palmitoyltransferase ODC_AZ PF02100.17 ORF8216 - 0.01 15.8 0.2 0.023 14.7 0.2 1.6 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme DUF1390 PF07150.11 ORF79020 - 0.00079 19.2 1.1 0.0014 18.4 1.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1390) C2 PF00168.30 ORF77186 - 1.1e-17 64.2 0.0 1.6e-17 63.6 0.0 1.3 1 0 0 1 1 1 1 C2 domain DHHC PF01529.20 ORF74023 - 5.7e-28 97.7 14.7 5.7e-28 97.7 14.7 2.5 2 1 0 2 2 2 1 DHHC palmitoyltransferase LRR_1 PF00560.33 ORF72350 - 5.1e-05 23.3 4.2 9.9 7.2 0.0 5.2 4 2 0 4 4 4 3 Leucine Rich Repeat LRR_4 PF12799.7 ORF72350 - 0.0037 17.6 7.6 9.4 6.8 0.1 5.3 3 2 3 6 6 6 2 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 ORF72350 - 0.029 14.4 17.4 0.088 12.9 0.5 5.7 6 0 0 6 6 6 0 Leucine Rich repeat POTRA_TamA_1 PF17243.2 ORF71729 - 0.0035 17.4 1.8 0.092 12.8 0.5 2.7 2 0 0 2 2 2 1 POTRA domain TamA domain 1 Nexin_C PF08628.12 ORF71729 - 0.027 15.0 0.6 0.095 13.3 0.6 2.0 1 1 0 1 1 1 0 Sorting nexin C terminal Clr2 PF10383.9 ORF71729 - 0.56 11.0 7.5 0.18 12.6 3.9 2.0 1 1 1 2 2 2 0 Transcription-silencing protein Clr2 MORN PF02493.20 ORF69445 - 2.7e-23 80.4 30.2 0.00031 20.4 0.0 9.2 8 1 0 8 8 8 6 MORN repeat GrlR PF16518.5 ORF69445 - 0.25 11.3 3.4 5.4 7.0 0.5 2.7 1 1 1 2 2 2 0 T3SS negative regulator,GrlR Pkinase PF00069.25 ORF63177 - 1.4e-76 257.3 0.2 1.8e-76 257.0 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63177 - 1.3e-35 123.0 0.0 1.7e-35 122.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF63177 - 2.1e-07 30.6 0.0 4.2e-06 26.3 0.0 2.1 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 ORF63177 - 1.4e-06 27.8 0.0 2.4e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF63177 - 1.3e-05 25.3 0.0 0.039 13.9 0.0 2.1 2 0 0 2 2 2 2 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF63177 - 0.0001 21.2 0.0 0.00022 20.1 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase Choline_kinase PF01633.20 ORF63177 - 0.0033 17.0 0.8 0.0081 15.8 0.5 1.7 1 1 0 1 1 1 1 Choline/ethanolamine kinase RNase_H PF00075.24 ORF63177 - 0.013 15.7 0.1 0.033 14.4 0.0 1.6 2 0 0 2 2 2 0 RNase H FTA2 PF13095.6 ORF63177 - 0.051 13.2 0.2 0.31 10.7 0.0 2.0 1 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 G10 PF01125.17 ORF63177 - 1.1 9.0 3.7 0.5 10.1 0.9 1.9 2 0 0 2 2 2 0 G10 protein Pkinase PF00069.25 ORF57929 - 3.8e-30 105.1 0.1 4.8e-30 104.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57929 - 1.9e-22 79.8 0.0 2.4e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF57929 - 4.8e-07 28.9 0.0 6.4e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF57929 - 0.0032 17.4 0.0 0.012 15.5 0.0 1.8 2 0 0 2 2 2 1 Phosphotransferase enzyme family Topoisom_bac PF01131.20 ORF57929 - 0.023 13.7 0.0 0.041 12.9 0.0 1.3 1 0 0 1 1 1 0 DNA topoisomerase ABC1 PF03109.16 ORF57929 - 0.024 14.8 0.2 0.41 10.8 0.0 2.3 2 0 0 2 2 2 0 ABC1 family NinG PF05766.12 ORF57929 - 0.32 10.9 5.6 1.1 9.2 0.5 2.3 1 1 1 2 2 2 0 Bacteriophage Lambda NinG protein SIS PF01380.22 ORF57849 - 2.4e-29 101.8 0.1 4.8e-29 100.9 0.1 1.5 2 0 0 2 2 2 1 SIS domain CBS PF00571.28 ORF57849 - 4.6e-10 39.8 0.1 0.00056 20.3 0.0 2.9 3 0 0 3 3 3 2 CBS domain Thiolase_C PF02803.18 ORF57849 - 0.052 13.2 0.4 0.25 11.0 0.1 2.2 1 1 1 2 2 2 0 Thiolase, C-terminal domain MFS_1_like PF12832.7 ORF5781 - 2.2e-43 148.6 5.5 3e-43 148.2 5.5 1.0 1 0 0 1 1 1 1 MFS_1 like family MFS_1 PF07690.16 ORF5781 - 1.1e-10 41.0 24.9 2.5e-07 30.0 5.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily LacY_symp PF01306.19 ORF5781 - 0.0094 14.8 2.9 0.016 14.0 2.9 1.5 1 1 0 1 1 1 1 LacY proton/sugar symporter DUF2070 PF09843.9 ORF5781 - 1.5 7.0 7.4 2.2 6.5 7.4 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Peptidase_C1 PF00112.23 ORF57510 - 6.9e-54 183.2 5.2 9.6e-54 182.7 5.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF57510 - 8.9e-12 45.3 0.1 1.5e-11 44.6 0.1 1.4 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF57510 - 0.0015 17.4 0.3 0.45 9.2 0.1 2.1 2 0 0 2 2 2 2 Peptidase C1-like family 2-Hacid_dh_C PF02826.19 ORF54983 - 5.5e-47 159.4 0.0 7e-47 159.1 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF54983 - 0.0094 16.1 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_C PF03720.15 ORF54983 - 0.14 12.6 0.0 0.24 11.8 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MORN PF02493.20 ORF47051 - 1.4e-24 84.4 34.5 1.8e-07 30.6 0.7 7.3 7 0 0 7 7 7 6 MORN repeat Peptidase_M23 PF01551.22 ORF42712 - 1.6e-26 92.3 0.2 3.8e-26 91.1 0.2 1.6 1 0 0 1 1 1 1 Peptidase family M23 Spc7 PF08317.11 ORF42712 - 0.0016 17.4 19.3 0.0023 16.8 19.3 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein V_ATPase_I PF01496.19 ORF42712 - 0.14 10.1 5.1 0.16 9.8 5.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FapA PF03961.13 ORF42712 - 0.23 10.0 9.2 0.33 9.5 9.2 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A p31comet PF06581.12 ORF42712 - 0.4 9.8 2.4 0.62 9.2 2.4 1.2 1 0 0 1 1 1 0 Mad1 and Cdc20-bound-Mad2 binding DUF1664 PF07889.12 ORF42712 - 0.7 9.9 4.7 1.5 8.9 4.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) TFIIA PF03153.13 ORF42712 - 0.7 9.8 17.3 0.87 9.5 17.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Vps51 PF08700.11 ORF42712 - 2 8.5 10.0 13 6.0 9.7 2.3 1 1 0 1 1 1 0 Vps51/Vps67 FUSC PF04632.12 ORF42712 - 4.9 5.6 14.0 6.3 5.2 14.0 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF1043 PF06295.12 ORF42712 - 5.5 7.0 18.3 1.1 9.2 13.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) Borrelia_P83 PF05262.11 ORF42712 - 5.5 5.4 16.6 7.5 4.9 16.6 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Phage_GPO PF05929.11 ORF42712 - 6.5 6.3 18.8 0.47 10.0 12.9 2.1 2 1 1 3 3 3 0 Phage capsid scaffolding protein (GPO) serine peptidase DivIVA PF05103.13 ORF42712 - 6.6 6.8 21.5 2.6 8.2 8.5 2.4 1 1 1 2 2 2 0 DivIVA protein TMPIT PF07851.13 ORF42712 - 7.7 5.7 9.7 13 5.0 9.7 1.5 1 0 0 1 1 1 0 TMPIT-like protein Presenilin PF01080.17 ORF42712 - 9.6 4.8 7.8 12 4.5 7.8 1.2 1 0 0 1 1 1 0 Presenilin AAA_13 PF13166.6 ORF42712 - 9.6 4.7 15.0 14 4.2 15.0 1.1 1 0 0 1 1 1 0 AAA domain Fzo_mitofusin PF04799.13 ORF34068 - 0.066 12.8 0.9 0.1 12.1 0.9 1.2 1 0 0 1 1 1 0 fzo-like conserved region Hamartin PF04388.12 ORF34068 - 0.17 10.5 18.4 0.22 10.1 18.4 1.3 1 0 0 1 1 1 0 Hamartin protein MORN PF02493.20 ORF31818 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat FlaC_arch PF05377.11 ORF27041 - 6.6 7.2 5.9 14 6.2 1.2 2.4 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Lzipper-MIP1 PF14389.6 ORF27041 - 10 6.5 13.6 0.089 13.1 2.4 2.9 2 1 1 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 Abhydrolase_1 PF00561.20 ORF22671 - 1.5e-06 28.1 0.0 0.033 13.8 0.0 2.3 2 1 0 2 2 2 2 alpha/beta hydrolase fold DLH PF01738.18 ORF22671 - 0.0069 16.0 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 ORF22671 - 0.017 14.4 0.0 3.6 6.8 0.0 2.2 2 0 0 2 2 2 0 Serine aminopeptidase, S33 DUF676 PF05057.14 ORF22671 - 0.045 13.2 0.0 0.077 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Pex16 PF08610.10 ORF20410 - 1.1e-17 64.3 0.1 1.6e-17 63.7 0.1 1.2 1 0 0 1 1 1 1 Peroxisomal membrane protein (Pex16) MORN PF02493.20 ORF19124 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat MORN PF02493.20 ORF152353 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat MORN PF02493.20 ORF147327 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat Pkinase PF00069.25 ORF144967 - 3.8e-30 105.1 0.1 4.8e-30 104.8 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF144967 - 1.9e-22 79.8 0.0 2.4e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF144967 - 4.8e-07 28.9 0.0 6.4e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF144967 - 0.0032 17.4 0.0 0.012 15.5 0.0 1.8 2 0 0 2 2 2 1 Phosphotransferase enzyme family Topoisom_bac PF01131.20 ORF144967 - 0.023 13.7 0.0 0.041 12.9 0.0 1.3 1 0 0 1 1 1 0 DNA topoisomerase ABC1 PF03109.16 ORF144967 - 0.024 14.8 0.2 0.41 10.8 0.0 2.3 2 0 0 2 2 2 0 ABC1 family NinG PF05766.12 ORF144967 - 0.32 10.9 5.6 1.1 9.2 0.5 2.3 1 1 1 2 2 2 0 Bacteriophage Lambda NinG protein TrbE PF11100.8 ORF143093 - 0.13 12.5 0.3 0.13 12.5 0.3 1.9 2 0 0 2 2 2 0 Conjugal transfer protein TrbE Chloroa_b-bind PF00504.21 ORF140896 - 1.4e-42 145.9 0.2 7.3e-30 104.6 0.1 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein Glyco_hydro_31 PF01055.26 ORF134637 - 8.2e-46 157.1 0.2 1.1e-45 156.7 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF134637 - 0.0074 16.5 0.1 0.018 15.3 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Methyltransf_4 PF02390.17 ORF134086 - 5.8e-43 146.3 0.6 9.4e-43 145.7 0.0 1.6 2 0 0 2 2 2 1 Putative methyltransferase MTS PF05175.14 ORF134086 - 0.00064 19.3 0.0 0.0012 18.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 ORF134086 - 0.00074 20.2 0.0 0.0012 19.4 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 ORF134086 - 0.0022 18.0 0.6 0.0045 17.0 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF134086 - 0.0032 17.3 0.0 0.0078 16.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF134086 - 0.0038 17.0 0.1 0.0056 16.5 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 ORF134086 - 0.016 14.3 0.0 0.032 13.3 0.0 1.5 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DOT1 PF08123.13 ORF134086 - 0.059 12.9 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_18 PF12847.7 ORF134086 - 0.063 13.2 0.0 0.59 10.1 0.0 2.2 1 1 0 1 1 1 0 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 ORF134086 - 0.092 11.7 0.2 0.2 10.6 0.0 1.6 2 0 0 2 2 2 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_11 PF08241.12 ORF134086 - 0.14 12.8 0.0 0.4 11.3 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain DUF2475 PF10629.9 ORF12373 - 2e-07 31.1 0.1 0.089 13.0 0.0 3.5 3 0 0 3 3 3 2 Protein of unknown function (DUF2475) MORN PF02493.20 ORF117730 - 1.9e-57 187.8 66.2 2.2e-09 36.7 0.8 10.6 10 1 0 10 10 10 10 MORN repeat DUF2048 PF09752.9 ORF117418 - 2.6e-38 132.0 0.0 3.4e-32 111.9 0.0 2.0 1 1 1 2 2 2 2 Abhydrolase domain containing 18 Peptidase_S15 PF02129.18 ORF117418 - 0.04 13.5 0.0 0.07 12.7 0.0 1.4 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Rhodanese PF00581.20 ORF112471 - 0.00012 22.6 0.0 0.00047 20.6 0.0 1.9 2 0 0 2 2 2 1 Rhodanese-like domain DSPc PF00782.20 ORF112471 - 0.0088 15.9 3.0 0.028 14.2 0.2 2.4 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain DUF1912 PF08930.10 ORF112471 - 0.032 14.4 0.6 0.14 12.4 0.0 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF1912) Trimer_CC PF08954.11 ORF112170 - 0.67 9.6 4.6 0.55 9.8 0.4 2.6 2 0 0 2 2 2 0 Trimerisation motif Glyco_hydro_31 PF01055.26 ORF11163 - 8.4e-47 160.3 0.2 1.1e-46 160.0 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF11163 - 0.0073 16.6 0.1 0.018 15.3 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Fer4_12 PF13353.6 ORF11021 - 0.14 12.4 0.2 0.14 12.4 0.2 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Metallophos PF00149.28 ORF109740 - 2.7e-09 37.9 0.0 3.2e-09 37.6 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Patatin PF01734.22 ORF10890 - 5e-15 56.2 0.0 3e-14 53.7 0.0 1.9 1 1 0 1 1 1 1 Patatin-like phospholipase A-2_8-polyST PF07388.11 ORF10890 - 0.085 11.4 0.0 6.2 5.3 0.0 2.3 2 0 0 2 2 2 0 Alpha-2,8-polysialyltransferase (POLYST) ATP-synt PF00231.19 ORF108575 - 6.1e-71 239.4 1.3 7e-71 239.2 1.3 1.0 1 0 0 1 1 1 1 ATP synthase Zein-binding PF04576.15 ORF103219 - 0.26 11.6 3.0 0.2 11.9 0.7 2.0 2 0 0 2 2 2 0 Zein-binding RPN7 PF10602.9 ORF103219 - 2 8.1 5.5 1.2 8.8 0.7 2.5 1 1 1 2 2 2 0 26S proteasome subunit RPN7 FUSC_2 PF13515.6 ORF101093 - 1.2e-26 93.4 13.0 1.7e-26 92.8 13.0 1.2 1 0 0 1 1 1 1 Fusaric acid resistance protein-like FUSC PF04632.12 ORF101093 - 3.5e-12 45.7 2.4 5.6e-12 45.0 2.4 1.2 1 0 0 1 1 1 1 Fusaric acid resistance protein family ALMT PF11744.8 ORF101093 - 0.028 13.3 1.2 0.11 11.3 0.7 2.1 1 1 0 1 1 1 0 Aluminium activated malate transporter SlyX PF04102.12 ORF101093 - 0.039 14.6 1.5 0.086 13.5 0.3 2.1 1 1 1 2 2 2 0 SlyX GWT1 PF06423.12 ORF101093 - 0.18 11.9 0.9 0.33 11.1 0.9 1.4 1 0 0 1 1 1 0 GWT1 Chibby PF14645.6 NODE_20733_length_958_cov_167.748646_g15918_i0forward_frame_1 - 0.053 13.9 0.2 0.12 12.8 0.2 1.7 1 1 0 1 1 1 0 Chibby family TPR_MLP1_2 PF07926.12 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0017 18.4 74.1 0.025 14.6 26.6 5.0 1 1 3 4 4 4 3 TPR/MLP1/MLP2-like protein GAS PF13851.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0026 17.2 76.7 0.11 11.8 24.0 3.5 1 1 2 3 3 3 2 Growth-arrest specific micro-tubule binding HMMR_N PF15905.5 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0029 17.1 32.9 0.0029 17.1 32.9 3.3 1 1 2 3 3 3 2 Hyaluronan mediated motility receptor N-terminal Filament PF00038.21 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0033 17.1 67.2 0.14 11.8 7.9 2.9 1 1 1 2 2 2 2 Intermediate filament protein Fez1 PF06818.15 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.004 17.6 65.4 0.057 13.9 9.8 3.7 1 1 2 3 3 3 2 Fez1 ADIP PF11559.8 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.0082 16.2 12.5 0.0082 16.2 12.5 5.0 1 1 3 4 4 4 1 Afadin- and alpha -actinin-Binding MbeD_MobD PF04899.12 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.021 14.9 0.5 0.021 14.9 0.5 4.2 2 2 2 5 5 5 0 MbeD/MobD like Lebercilin PF15619.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.033 13.9 70.9 0.027 14.1 13.0 4.1 1 1 3 4 4 4 0 Ciliary protein causing Leber congenital amaurosis disease DHR10 PF18595.1 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.036 14.1 68.6 0.32 11.0 5.2 4.4 1 1 2 3 3 3 0 Designed helical repeat protein 10 domain HOOK PF05622.12 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.038 12.2 74.5 0.6 8.2 33.7 3.6 1 1 0 2 2 2 0 HOOK protein Spc7 PF08317.11 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.041 12.8 74.6 0.04 12.8 26.3 3.8 1 1 1 3 3 3 0 Spc7 kinetochore protein AAA_13 PF13166.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.044 12.4 66.5 0.23 10.1 41.8 3.0 1 1 2 3 3 3 0 AAA domain SHE3 PF17078.5 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.08 12.7 73.0 2.3 7.9 24.5 4.2 1 1 2 3 3 3 0 SWI5-dependent HO expression protein 3 ATG16 PF08614.11 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.13 12.5 66.5 0.081 13.1 16.3 4.3 1 1 3 4 4 4 0 Autophagy protein 16 (ATG16) TMF_TATA_bd PF12325.8 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.16 12.2 66.1 0.041 14.1 11.3 5.0 1 1 5 6 6 6 0 TATA element modulatory factor 1 TATA binding Laminin_II PF06009.12 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.17 11.9 58.5 0.13 12.3 16.4 4.2 1 1 3 4 4 4 0 Laminin Domain II Cast PF10174.9 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.18 10.0 68.2 0.33 9.1 68.2 1.4 1 1 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone ERM PF00769.19 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.28 11.0 60.5 15 5.3 41.1 3.1 1 1 1 2 2 2 0 Ezrin/radixin/moesin family CALCOCO1 PF07888.11 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.64 8.8 64.1 0.019 13.9 43.6 3.0 1 1 2 3 3 3 0 Calcium binding and coiled-coil domain (CALCOCO1) like TMP_2 PF06791.13 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.67 9.6 4.3 24 4.5 0.2 3.3 3 1 1 4 4 4 0 Prophage tail length tape measure protein DUF4201 PF13870.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 0.87 9.3 68.4 0.16 11.7 34.2 4.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4201) KASH_CCD PF14662.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.4 8.7 78.3 0.046 13.5 23.2 3.9 1 1 3 4 4 4 0 Coiled-coil region of CCDC155 or KASH APG6_N PF17675.1 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.5 9.4 75.8 0.76 10.3 20.6 4.4 1 1 4 5 5 4 0 Apg6 coiled-coil region BicD PF09730.9 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.7 7.0 67.1 0.084 11.3 11.4 3.0 1 1 2 3 3 3 0 Microtubule-associated protein Bicaudal-D Golgin_A5 PF09787.9 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.7 8.0 71.0 0.89 9.0 32.1 3.1 1 1 2 3 3 3 0 Golgin subfamily A member 5 DUF4407 PF14362.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.7 7.9 52.7 0.38 10.1 11.7 3.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) HAP1_N PF04849.13 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.8 7.7 66.8 2.2 7.4 24.7 3.4 1 1 2 3 3 3 0 HAP1 N-terminal conserved region Tropomyosin PF00261.20 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.8 7.9 70.1 0.97 8.8 44.5 2.5 1 1 1 2 2 2 0 Tropomyosin Tropomyosin_1 PF12718.7 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 1.8 8.7 82.1 0.2 11.8 16.4 4.0 1 1 3 4 4 4 0 Tropomyosin like MAD PF05557.13 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 2 6.7 74.8 0.052 11.9 56.3 2.9 1 1 2 3 3 3 0 Mitotic checkpoint protein TMPIT PF07851.13 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 2.9 7.1 63.8 0.027 13.7 6.4 4.0 1 1 3 4 4 4 0 TMPIT-like protein Jnk-SapK_ap_N PF09744.9 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 6.9 6.9 72.0 0.37 11.0 16.9 4.2 1 1 4 5 5 5 0 JNK_SAPK-associated protein-1 Snapin_Pallidin PF14712.6 NODE_20623_length_962_cov_79.961165_g15831_i0forward_frame_3 - 10 6.7 55.6 0.07 13.6 13.4 4.8 2 2 2 4 4 4 0 Snapin/Pallidin Myb_DNA-binding PF00249.31 NODE_20616_length_962_cov_161.554477_g15698_i1reverse_frame_2 - 1e-07 32.0 0.2 2.3e-07 30.9 0.2 1.6 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 NODE_20616_length_962_cov_161.554477_g15698_i1reverse_frame_2 - 2.9e-06 27.4 0.8 7.4e-06 26.1 0.8 1.8 1 0 0 1 1 1 1 Myb-like DNA-binding domain D5_N PF08706.11 NODE_20586_length_963_cov_117.552802_g15798_i0reverse_frame_2 - 0.32 11.2 7.0 0.52 10.6 7.0 1.3 1 0 0 1 1 1 0 D5 N terminal like DUF5401 PF17380.2 NODE_20586_length_963_cov_117.552802_g15798_i0reverse_frame_2 - 1.9 6.5 19.7 2.4 6.1 19.7 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Borrelia_P83 PF05262.11 NODE_20586_length_963_cov_117.552802_g15798_i0reverse_frame_2 - 8 4.8 26.0 11 4.3 26.0 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Cast PF10174.9 ORF95806 - 0.0075 14.6 19.4 0.0094 14.2 19.4 1.1 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone VPS38 PF17649.1 ORF95806 - 0.0079 15.1 5.6 0.011 14.7 5.6 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting 38 DUF1664 PF07889.12 ORF95806 - 0.015 15.3 5.1 0.015 15.3 5.1 2.3 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Lebercilin PF15619.6 ORF95806 - 0.017 14.8 28.5 0.2 11.3 16.8 2.1 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Prominin PF05478.11 ORF95806 - 0.022 12.7 10.7 0.028 12.4 10.7 1.1 1 0 0 1 1 1 0 Prominin Lipoprotein_6 PF01441.19 ORF95806 - 0.034 14.2 2.3 0.05 13.6 2.3 1.2 1 0 0 1 1 1 0 Lipoprotein Spc7 PF08317.11 ORF95806 - 0.092 11.6 27.8 0.056 12.3 24.4 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein Fib_alpha PF08702.10 ORF95806 - 0.1 12.8 13.6 0.95 9.6 2.5 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family FAM184 PF15665.5 ORF95806 - 0.1 12.4 20.8 0.15 11.8 20.8 1.2 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Urocanase PF01175.18 ORF95806 - 0.14 11.7 3.0 0.22 11.1 3.0 1.3 1 0 0 1 1 1 0 Urocanase Rossmann-like domain AAA_13 PF13166.6 ORF95806 - 0.3 9.7 14.1 0.37 9.4 14.1 1.1 1 0 0 1 1 1 0 AAA domain DUF724 PF05266.14 ORF95806 - 0.56 10.0 15.2 0.33 10.8 13.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF724) ATG16 PF08614.11 ORF95806 - 0.57 10.4 32.9 4.1 7.6 27.3 2.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Fez1 PF06818.15 ORF95806 - 0.76 10.2 26.5 1.5 9.2 26.0 1.6 1 1 0 1 1 1 0 Fez1 Cluap1 PF10234.9 ORF95806 - 0.91 8.9 18.4 3.4 7.0 7.5 2.1 1 1 1 2 2 2 0 Clusterin-associated protein-1 TPR_MLP1_2 PF07926.12 ORF95806 - 1 9.4 34.4 0.14 12.2 9.9 2.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein MAP65_ASE1 PF03999.12 ORF95806 - 1 8.0 14.2 1.6 7.3 14.2 1.2 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) CENP-H PF05837.12 ORF95806 - 1.2 9.6 26.5 0.6 10.5 12.8 2.3 1 1 1 2 2 2 0 Centromere protein H (CENP-H) IFT57 PF10498.9 ORF95806 - 1.2 8.0 16.5 0.69 8.8 13.4 1.8 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 CCDC144C PF14915.6 ORF95806 - 1.3 8.1 25.7 0.31 10.1 13.0 2.5 1 1 2 3 3 3 0 CCDC144C protein coiled-coil region DUF3584 PF12128.8 ORF95806 - 1.3 6.4 26.0 1.8 5.9 26.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) FUSC PF04632.12 ORF95806 - 1.5 7.3 13.0 1.7 7.1 13.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family SPAM PF02090.15 ORF95806 - 2.1 8.1 14.6 0.53 10.1 3.3 2.3 1 1 1 2 2 2 0 Salmonella surface presentation of antigen gene type M protein Fmp27_WPPW PF10359.9 ORF95806 - 2.1 7.1 10.5 3.2 6.5 10.5 1.3 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF4407 PF14362.6 ORF95806 - 2.1 7.6 18.5 3.1 7.1 18.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) COG2 PF06148.11 ORF95806 - 2.3 8.3 13.8 0.3 11.2 3.8 2.6 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Gp58 PF07902.11 ORF95806 - 2.6 6.2 11.2 3.5 5.8 11.2 1.1 1 0 0 1 1 1 0 gp58-like protein V_ATPase_I PF01496.19 ORF95806 - 3.6 5.4 9.5 5 4.9 9.5 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HAUS-augmin3 PF14932.6 ORF95806 - 4 6.9 26.6 9.7 5.7 26.6 1.7 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 GAS PF13851.6 ORF95806 - 5 6.4 26.2 0.4 10.0 8.9 2.2 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Sec34 PF04136.15 ORF95806 - 5 7.0 14.1 0.92 9.4 1.3 2.4 1 1 1 2 2 2 0 Sec34-like family RasGAP_C PF03836.15 ORF95806 - 5.6 7.1 12.3 0.87 9.7 3.8 2.3 1 1 1 2 2 2 0 RasGAP C-terminus DHR10 PF18595.1 ORF95806 - 6.5 6.8 34.1 14 5.8 15.1 2.3 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain MMPL PF03176.15 ORF95806 - 6.8 5.5 6.7 9.1 5.1 6.7 1.2 1 0 0 1 1 1 0 MMPL family TMPIT PF07851.13 ORF95806 - 7.6 5.7 14.3 8.9 5.4 13.3 1.6 1 1 0 1 1 1 0 TMPIT-like protein Atg14 PF10186.9 ORF95806 - 8.9 5.3 21.5 20 4.1 21.5 1.6 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FliJ PF02050.16 ORF95806 - 9.2 6.5 34.4 0.49 10.6 28.6 1.8 2 0 0 2 2 2 0 Flagellar FliJ protein FliD_C PF07195.12 ORF95806 - 9.3 5.6 10.6 1.3e+02 1.9 10.6 2.3 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus BST2 PF16716.5 ORF95806 - 9.4 6.9 31.7 0.16 12.5 17.9 3.1 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 DUF5082 PF16888.5 ORF95806 - 9.4 6.5 18.0 0.9 9.8 9.1 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF4200 PF13863.6 ORF95806 - 9.5 6.7 26.1 1.4 9.3 14.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) Amino_oxidase PF01593.24 ORF92459 - 2.1e-41 142.7 0.2 2.4e-41 142.5 0.2 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Ubiq_cyt_C_chap PF03981.12 ORF90919 - 0.04 14.0 0.0 0.075 13.1 0.0 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone CUTL PF16557.5 ORF90919 - 0.16 12.2 0.2 0.42 10.8 0.2 1.7 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB Herpes_UL87 PF03043.14 ORF90565 - 0.04 12.4 1.0 0.057 11.9 1.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL87 family MFS_1 PF07690.16 ORF89522 - 3.5e-35 121.6 28.3 1.7e-21 76.6 14.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF89522 - 9.2e-06 24.8 0.6 9.2e-06 24.8 0.6 2.4 2 1 0 2 2 2 1 Sugar (and other) transporter MFS_3 PF05977.13 ORF89522 - 1.9e-05 23.3 14.9 0.00028 19.4 10.3 2.1 1 1 1 2 2 2 2 Transmembrane secretion effector MFS_1_like PF12832.7 ORF89522 - 0.007 15.3 9.0 0.026 13.4 0.2 3.2 3 0 0 3 3 3 1 MFS_1 like family AAA_30 PF13604.6 ORF8371 - 3.4e-11 43.2 0.0 2.7e-10 40.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF8371 - 1.5e-08 34.7 0.4 0.0014 18.4 0.2 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 ORF8371 - 0.0009 19.6 0.3 0.066 13.5 0.3 2.7 1 1 0 1 1 1 1 AAA domain Herpes_Helicase PF02689.14 ORF8371 - 0.017 13.1 0.0 0.023 12.6 0.0 1.1 1 0 0 1 1 1 0 Helicase IstB_IS21 PF01695.17 ORF8371 - 0.033 13.9 0.0 0.055 13.2 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_11 PF13086.6 ORF8371 - 0.035 13.9 0.4 6 6.6 0.0 2.2 1 1 1 2 2 2 0 AAA domain AAA PF00004.29 ORF8371 - 0.055 13.9 0.0 0.17 12.3 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Pkinase PF00069.25 ORF78836 - 3.4e-82 275.8 0.0 4.1e-82 275.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78836 - 4.9e-41 140.7 0.0 6.1e-41 140.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF78836 - 2.9e-05 23.5 0.0 6.9e-05 22.3 0.0 1.6 2 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF78836 - 0.0017 17.8 0.0 0.0027 17.1 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family ABC1 PF03109.16 ORF78836 - 0.016 15.4 0.1 0.033 14.4 0.1 1.5 1 0 0 1 1 1 0 ABC1 family APH PF01636.23 ORF78836 - 0.017 15.1 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 ORF78836 - 0.031 13.8 0.0 0.061 12.8 0.0 1.4 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF78836 - 0.065 12.0 0.0 0.082 11.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Bromodomain PF00439.25 ORF74681 - 5.8e-24 84.0 4.5 2.4e-23 82.0 0.3 3.0 3 0 0 3 3 3 1 Bromodomain Acetyltransf_1 PF00583.25 ORF74681 - 6.4e-07 29.6 0.0 1.2e-06 28.7 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF74681 - 1.3e-06 28.3 2.4 8e-06 25.8 1.0 2.5 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF74681 - 0.00048 20.5 0.4 0.00099 19.5 0.4 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF74681 - 0.039 13.9 0.3 0.39 10.7 0.0 2.2 2 0 0 2 2 2 0 FR47-like protein TetR_C_8 PF14278.6 ORF74681 - 1.1 9.4 8.5 3.1 8.0 0.3 3.2 3 1 0 3 3 3 0 Transcriptional regulator C-terminal region Cation_ATPase_C PF00689.21 ORF73533 - 0.0098 15.6 11.1 0.032 13.9 11.0 1.8 1 1 1 2 2 2 1 Cation transporting ATPase, C-terminus DUF3487 PF11990.8 ORF73533 - 1.3 8.9 4.6 0.71 9.8 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) DUF1600 PF07667.11 ORF73533 - 7.2 6.9 11.0 1.3 9.2 5.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1600) DUF1778 PF08681.11 ORF7255 - 0.12 12.3 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1778) START PF01852.19 ORF7217 - 3e-10 39.9 0.0 4.5e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 START domain Sugar_tr PF00083.24 ORF71497 - 7.1e-42 143.8 7.7 8.5e-42 143.6 7.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF71497 - 2.2e-10 40.0 2.0 3e-10 39.6 2.0 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily Metallophos PF00149.28 ORF6277 - 8.7e-39 134.1 0.0 1.1e-38 133.8 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF6277 - 1.1e-20 73.8 2.9 2.6e-20 72.6 1.6 2.1 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain AAA_30 PF13604.6 ORF60400 - 3.4e-11 43.2 0.0 2.7e-10 40.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF60400 - 1.5e-08 34.7 0.4 0.0014 18.4 0.2 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.6 ORF60400 - 0.0009 19.6 0.3 0.066 13.5 0.3 2.7 1 1 0 1 1 1 1 AAA domain Herpes_Helicase PF02689.14 ORF60400 - 0.017 13.1 0.0 0.023 12.6 0.0 1.1 1 0 0 1 1 1 0 Helicase IstB_IS21 PF01695.17 ORF60400 - 0.033 13.9 0.0 0.055 13.2 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_11 PF13086.6 ORF60400 - 0.035 13.9 0.4 6 6.6 0.0 2.2 1 1 1 2 2 2 0 AAA domain AAA PF00004.29 ORF60400 - 0.055 13.9 0.0 0.17 12.3 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Tmemb_9 PF05434.11 ORF53860 - 0.012 15.5 0.2 0.025 14.5 0.2 1.5 1 0 0 1 1 1 0 TMEM9 DUF4051 PF13260.6 ORF53860 - 0.021 14.6 1.0 0.044 13.5 1.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF4051) DUF3592 PF12158.8 ORF53860 - 0.09 12.8 4.8 0.51 10.4 5.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3592) Ac76 PF05814.11 ORF53860 - 0.12 12.4 0.7 0.31 11.1 0.7 1.6 1 0 0 1 1 1 0 Orf76 (Ac76) Orf78 PF06024.12 ORF53860 - 0.14 12.4 0.1 0.14 12.4 0.1 2.0 2 0 0 2 2 2 0 Orf78 (ac78) DUF3139 PF11337.8 ORF53860 - 3.5 8.4 7.4 13 6.5 7.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) DUF1304 PF06993.12 ORF5273 - 0.32 11.0 3.9 0.74 9.8 3.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1304) Pex24p PF06398.11 ORF5273 - 0.6 9.0 17.1 0.016 14.2 10.3 1.8 2 1 0 2 2 2 0 Integral peroxisomal membrane peroxin Metallophos PF00149.28 ORF48180 - 9.9e-38 130.7 0.1 1.3e-37 130.3 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF48180 - 1.2e-22 80.0 2.7 3.2e-22 78.7 1.5 2.1 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain P22_AR_C PF10548.9 ORF48180 - 0.17 12.1 0.0 0.37 11.0 0.0 1.4 1 0 0 1 1 1 0 P22AR C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks55.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks55.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks55.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks55.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:39 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- NPFF PF15085.6 ORF3934 - 0.14 12.5 0.9 0.33 11.3 0.1 2.0 2 1 1 3 3 3 0 Neuropeptide FF COG2 PF06148.11 ORF38824 - 0.4 10.8 19.2 1 9.5 4.6 3.4 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Fez1 PF06818.15 ORF38824 - 1.7 9.1 36.5 0.14 12.6 19.7 2.5 1 1 1 2 2 2 0 Fez1 ADIP PF11559.8 ORF38824 - 2.1 8.4 34.9 4.1 7.5 7.6 3.4 3 0 0 3 3 3 0 Afadin- and alpha -actinin-Binding DUF1664 PF07889.12 ORF38824 - 8.3 6.5 21.6 0.77 9.8 1.7 3.5 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) DHHC PF01529.20 ORF37153 - 5.4e-32 110.7 18.2 7.3e-32 110.3 18.2 1.2 1 0 0 1 1 1 1 DHHC palmitoyltransferase Sigma_reg_N PF13800.6 ORF37153 - 0.061 13.6 1.2 0.18 12.1 1.2 1.7 1 0 0 1 1 1 0 Sigma factor regulator N-terminal Tmemb_9 PF05434.11 ORF37153 - 0.29 11.0 3.1 0.14 12.1 0.5 1.8 2 0 0 2 2 2 0 TMEM9 Serinc PF03348.15 ORF37153 - 0.65 8.9 8.7 1.4 7.7 8.7 1.6 1 1 0 1 1 1 0 Serine incorporator (Serinc) PSI PF01437.25 ORF37153 - 0.88 10.2 9.5 2 9.0 9.5 1.6 1 0 0 1 1 1 0 Plexin repeat CP12 PF02672.15 ORF3637 - 0.17 12.6 0.0 0.17 12.6 0.0 1.8 2 0 0 2 2 2 0 CP12 domain WD40 PF00400.32 ORF34661 - 1.9e-07 31.6 4.7 0.021 15.7 0.2 4.4 5 0 0 5 5 5 3 WD domain, G-beta repeat DUF2415 PF10313.9 ORF34661 - 0.028 14.3 0.0 0.072 13.0 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein domain (DUF2415) ADH_zinc_N PF00107.26 ORF33983 - 3.7e-26 91.6 0.0 5.9e-26 91.0 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase NYD-SP28_assoc PF14775.6 ORF31871 - 6.7e-19 67.8 5.6 1.3e-18 66.8 5.6 1.5 1 0 0 1 1 1 1 Sperm tail C-terminal domain Secretin_N_2 PF07655.13 ORF31871 - 0.26 11.8 3.7 1.4 9.5 0.1 2.2 2 0 0 2 2 2 0 Secretin N-terminal domain COG2 PF06148.11 ORF28508 - 0.4 10.8 19.2 1 9.5 4.6 3.4 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Fez1 PF06818.15 ORF28508 - 1.7 9.1 36.5 0.14 12.6 19.7 2.5 1 1 1 2 2 2 0 Fez1 ADIP PF11559.8 ORF28508 - 2.1 8.4 34.9 4.1 7.5 7.6 3.4 3 0 0 3 3 3 0 Afadin- and alpha -actinin-Binding DUF1664 PF07889.12 ORF28508 - 8.3 6.5 21.6 0.77 9.8 1.7 3.5 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) FHA PF00498.26 ORF27446 - 4.6e-20 71.7 0.1 6.8e-09 35.9 0.0 2.6 2 0 0 2 2 2 2 FHA domain Yop-YscD_cpl PF16697.5 ORF27446 - 1.8e-10 41.0 0.0 1.8e-06 28.2 0.0 2.9 3 0 0 3 3 3 2 Inner membrane component of T3SS, cytoplasmic domain Metallophos PF00149.28 ORF26349 - 9.9e-38 130.7 0.1 1.3e-37 130.3 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF26349 - 1.2e-22 80.0 2.7 3.2e-22 78.7 1.5 2.1 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain P22_AR_C PF10548.9 ORF26349 - 0.17 12.1 0.0 0.37 11.0 0.0 1.4 1 0 0 1 1 1 0 P22AR C-terminal domain TMEM154 PF15102.6 ORF2576 - 0.28 11.1 3.3 13 5.7 0.1 2.6 2 0 0 2 2 2 0 TMEM154 protein family Wzy_C PF04932.15 ORF2576 - 5.9 6.5 10.9 9.9 5.8 0.2 2.7 2 1 0 2 2 2 0 O-Antigen ligase HEAT PF02985.22 ORF20621 - 0.038 14.2 0.0 0.12 12.7 0.0 1.9 1 0 0 1 1 1 0 HEAT repeat TSP_1 PF00090.19 ORF149790 - 2e-22 79.1 27.0 7.3e-09 35.7 3.2 4.5 4 0 0 4 4 4 4 Thrombospondin type 1 domain Polyoma_lg_T_C PF06431.11 ORF149790 - 0.25 10.2 0.0 0.34 9.7 0.0 1.1 1 0 0 1 1 1 0 Polyomavirus large T antigen C-terminus Sulf_transp PF04143.14 ORF147993 - 7.1e-96 321.4 33.5 8e-96 321.2 33.5 1.0 1 0 0 1 1 1 1 Sulphur transport COX2-transmemb PF09125.10 ORF147993 - 0.29 11.0 1.9 0.56 10.1 0.3 2.4 2 0 0 2 2 2 0 Cytochrome C oxidase subunit II, transmembrane DUF5565 PF17720.1 ORF146047 - 0.062 12.2 0.0 0.11 11.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5565) Methyltransf_11 PF08241.12 ORF145948 - 4.6e-23 81.7 0.2 2.1e-22 79.6 0.1 2.1 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF145948 - 4.7e-21 75.3 0.2 2.6e-20 72.9 0.1 2.2 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF145948 - 1.5e-15 57.2 0.0 2.2e-15 56.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 ORF145948 - 6.2e-14 52.1 0.0 1.1e-13 51.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF145948 - 5.2e-11 42.7 0.0 7.8e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF145948 - 2.1e-09 38.0 0.0 4e-09 37.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF145948 - 5.5e-05 22.6 0.0 8.3e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 ORF145948 - 0.00018 21.1 0.0 0.00054 19.5 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase small domain adh_short_C2 PF13561.6 ORF145948 - 0.00072 19.2 0.1 0.0036 16.9 0.2 1.9 2 0 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase Methyltransf_29 PF03141.16 ORF145948 - 0.0031 16.1 0.0 0.0065 15.1 0.0 1.6 2 1 0 2 2 2 1 Putative S-adenosyl-L-methionine-dependent methyltransferase adh_short PF00106.25 ORF145948 - 0.043 13.3 0.0 2.5 7.5 0.2 2.2 1 1 1 2 2 2 0 short chain dehydrogenase UPF0020 PF01170.18 ORF145948 - 0.05 13.3 0.0 0.092 12.4 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_8 PF05148.15 ORF145948 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase Viral_Beta_CD PF04530.12 ORF139213 - 0.019 15.3 0.0 0.066 13.5 0.0 1.9 1 0 0 1 1 1 0 Viral Beta C/D like family Ank_2 PF12796.7 ORF138464 - 5.2e-42 142.3 14.9 1.4e-15 57.6 0.8 3.3 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF138464 - 5.7e-24 81.6 7.8 0.00058 20.1 0.0 6.4 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF138464 - 2.7e-18 65.8 11.0 0.0024 18.1 0.0 6.5 1 1 5 6 6 6 5 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF138464 - 4.2e-18 65.5 5.3 5.1e-08 33.3 0.2 4.2 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF138464 - 4.8e-15 55.2 13.2 0.016 15.6 0.0 5.8 6 0 0 6 6 6 5 Ankyrin repeat TPR_2 PF07719.17 ORF138464 - 0.0078 16.3 0.1 1.5 9.1 0.0 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF1687 PF07955.11 ORF138464 - 0.015 15.8 0.0 0.027 15.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1687) TPR_1 PF00515.28 ORF138464 - 0.019 14.8 0.0 1.3 9.0 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF138464 - 0.024 14.8 0.1 1.8 9.0 0.0 3.1 2 0 0 2 2 2 0 Tetratricopeptide repeat MIT PF04212.18 ORF138464 - 0.03 14.4 0.1 0.27 11.3 0.1 2.4 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain TPR_12 PF13424.6 ORF138464 - 0.045 14.0 1.4 0.92 9.8 0.1 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF138464 - 0.19 12.4 0.6 1.5 9.6 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat Pex24p PF06398.11 ORF119330 - 0.9 8.5 17.9 0.016 14.2 10.3 1.8 2 1 0 2 2 2 0 Integral peroxisomal membrane peroxin P_C10 PF14974.6 ORF11785 - 5e-06 26.6 2.5 2.2e-05 24.5 0.0 2.8 3 0 0 3 3 3 1 Protein C10 TPR_1 PF00515.28 ORF11785 - 5.3e-05 22.9 1.2 0.096 12.5 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF11785 - 0.00011 22.6 2.1 0.00011 22.6 2.1 2.6 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF11785 - 0.00018 21.4 7.4 0.013 15.5 0.1 3.0 3 0 0 3 3 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF11785 - 0.00035 20.7 1.4 0.00073 19.6 1.4 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat DUF3856 PF12968.7 ORF11785 - 0.00091 19.3 1.2 0.005 16.9 1.2 2.2 1 1 0 1 1 1 1 Domain of Unknown Function (DUF3856) TPR_16 PF13432.6 ORF11785 - 0.0011 19.6 1.4 0.0011 19.6 1.4 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat BTAD PF03704.17 ORF11785 - 0.002 18.6 4.2 0.002 18.6 4.2 2.7 2 2 0 2 2 2 1 Bacterial transcriptional activator domain ANAPC3 PF12895.7 ORF11785 - 0.0025 18.0 0.4 0.0063 16.7 0.4 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_8 PF13181.6 ORF11785 - 0.0035 17.4 0.0 0.015 15.5 0.0 2.2 1 0 0 1 1 1 1 Tetratricopeptide repeat SRP_TPR_like PF17004.5 ORF11785 - 0.027 14.5 0.4 0.027 14.5 0.4 1.8 2 0 0 2 2 2 0 Putative TPR-like repeat TPR_14 PF13428.6 ORF11785 - 0.034 14.9 6.9 0.11 13.4 0.3 3.2 2 1 1 3 3 3 0 Tetratricopeptide repeat Vinculin PF01044.19 ORF11785 - 0.036 12.3 3.6 0.059 11.6 3.6 1.2 1 0 0 1 1 1 0 Vinculin family TPR_6 PF13174.6 ORF11785 - 0.33 11.7 0.1 0.33 11.7 0.1 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF4192 PF13830.6 ORF11785 - 0.38 10.8 0.0 0.38 10.8 0.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4192) TPR_17 PF13431.6 ORF11785 - 0.48 10.9 1.9 13 6.4 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF11785 - 0.91 9.9 6.5 0.45 10.8 2.0 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat Geminin PF07412.12 ORF116515 - 0.057 13.1 0.3 0.11 12.3 0.3 1.3 1 0 0 1 1 1 0 Geminin Metallophos PF00149.28 ORF115050 - 1e-16 62.1 0.0 2.4e-16 60.8 0.0 1.6 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase zf-FLZ PF04570.14 ORF115050 - 0.15 11.5 0.7 16 5.1 0.1 2.4 2 0 0 2 2 2 0 zinc-finger of the FCS-type, C2-C2 EF-hand_6 PF13405.6 ORF11305 - 0.0043 16.9 0.0 0.009 15.9 0.0 1.5 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF11305 - 0.0093 15.4 0.0 0.019 14.5 0.0 1.6 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF11305 - 0.012 15.5 0.0 0.036 13.9 0.0 1.7 2 0 0 2 2 2 0 EF-hand domain pair EF-hand_7 PF13499.6 ORF11305 - 0.014 15.8 0.0 0.026 15.0 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF11305 - 0.088 13.1 0.0 0.2 12.0 0.0 1.6 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region PhoLip_ATPase_N PF16209.5 ORF112601 - 4.2e-16 58.4 0.8 8.7e-16 57.4 0.8 1.5 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 ORF112601 - 0.00079 19.0 0.0 0.0015 18.1 0.0 1.5 1 0 0 1 1 1 1 E1-E2 ATPase Pkinase PF00069.25 ORF106351 - 3.4e-82 275.8 0.0 4.1e-82 275.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF106351 - 4.9e-41 140.7 0.0 6.1e-41 140.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF106351 - 2.9e-05 23.5 0.0 6.9e-05 22.3 0.0 1.6 2 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF106351 - 0.0017 17.8 0.0 0.0027 17.1 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family ABC1 PF03109.16 ORF106351 - 0.016 15.4 0.1 0.033 14.4 0.1 1.5 1 0 0 1 1 1 0 ABC1 family APH PF01636.23 ORF106351 - 0.017 15.1 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 ORF106351 - 0.031 13.8 0.0 0.061 12.8 0.0 1.4 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Pkinase_fungal PF17667.1 ORF106351 - 0.065 12.0 0.0 0.082 11.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase DUF2838 PF10998.8 ORF105109 - 1.8e-24 86.1 10.9 1.8e-24 86.1 10.9 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF2838) DUF402 PF04167.13 ORF105109 - 0.23 11.7 2.6 0.34 11.1 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF402) Metallophos PF00149.28 ORF103233 - 9.9e-38 130.7 0.1 1.3e-37 130.3 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF103233 - 1.2e-22 80.0 2.7 3.2e-22 78.7 1.5 2.1 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain P22_AR_C PF10548.9 ORF103233 - 0.17 12.1 0.0 0.37 11.0 0.0 1.4 1 0 0 1 1 1 0 P22AR C-terminal domain adh_short PF00106.25 ORF101831 - 8.8e-34 116.7 0.1 1.4e-33 116.1 0.1 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF101831 - 8.5e-21 74.6 0.0 1.2e-20 74.1 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF101831 - 0.0011 18.9 0.0 0.0016 18.4 0.0 1.3 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 ORF101831 - 0.008 16.1 0.1 0.014 15.3 0.1 1.4 1 0 0 1 1 1 1 NAD(P)H-binding ApbA PF02558.16 ORF101831 - 0.014 15.0 0.0 0.028 14.0 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 ORF101831 - 0.053 13.4 0.0 0.084 12.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Adenylsucc_synt PF00709.21 ORF101831 - 0.056 12.4 0.0 0.086 11.7 0.0 1.2 1 0 0 1 1 1 0 Adenylosuccinate synthetase IMUP PF15761.5 NODE_20825_length_956_cov_96.615635_g15993_i0reverse_frame_1 - 0.0086 16.8 0.2 0.02 15.5 0.2 1.6 1 0 0 1 1 1 1 Immortalisation up-regulated protein eIF3g PF12353.8 NODE_20825_length_956_cov_96.615635_g15993_i0reverse_frame_1 - 0.011 16.1 0.3 0.022 15.2 0.3 1.4 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit G Copper-fist PF00649.18 NODE_20825_length_956_cov_96.615635_g15993_i0reverse_frame_1 - 0.055 13.0 0.5 0.11 12.0 0.5 1.4 1 0 0 1 1 1 0 Copper fist DNA binding domain MRI PF15325.6 NODE_20825_length_956_cov_96.615635_g15993_i0reverse_frame_1 - 0.9 10.7 5.3 0.87 10.7 3.4 2.0 2 0 0 2 2 2 0 Modulator of retrovirus infection Sporozoite_P67 PF05642.11 NODE_20825_length_956_cov_96.615635_g15993_i0reverse_frame_1 - 1.7 6.6 6.7 2.1 6.3 6.7 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen AF-4 PF05110.13 NODE_20825_length_956_cov_96.615635_g15993_i0reverse_frame_1 - 5.7 4.9 9.5 8.1 4.4 9.5 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein LRR_4 PF12799.7 NODE_20733_length_958_cov_167.748646_g15918_i0forward_frame_2 - 3.5e-15 55.9 6.8 3.9e-05 23.9 1.6 4.3 2 1 1 4 4 4 4 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 NODE_20733_length_958_cov_167.748646_g15918_i0forward_frame_2 - 6.9e-15 55.0 1.5 2.8e-13 49.8 1.3 2.2 1 1 1 2 2 2 2 Leucine-rich repeat LRR_8 PF13855.6 NODE_20733_length_958_cov_167.748646_g15918_i0forward_frame_2 - 7.1e-13 48.1 4.1 0.00064 19.4 0.0 3.5 3 0 0 3 3 3 3 Leucine rich repeat LRR_6 PF13516.6 NODE_20733_length_958_cov_167.748646_g15918_i0forward_frame_2 - 0.0003 20.6 6.4 0.095 12.8 0.0 5.2 6 1 0 6 6 6 1 Leucine Rich repeat LRR_1 PF00560.33 NODE_20733_length_958_cov_167.748646_g15918_i0forward_frame_2 - 0.013 15.9 2.5 67 4.6 0.6 5.1 4 1 0 4 4 4 0 Leucine Rich Repeat LRRC37AB_C PF14914.6 NODE_20733_length_958_cov_167.748646_g15918_i0forward_frame_2 - 6.3 6.7 5.9 13 5.6 5.9 1.5 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain CsgE PF10627.9 ORF98073 - 0.2 11.9 0.0 0.33 11.2 0.0 1.3 1 0 0 1 1 1 0 Curli assembly protein CsgE 7tm_7 PF08395.12 ORF96392 - 0.0003 20.1 1.3 0.00042 19.6 1.3 1.1 1 0 0 1 1 1 1 7tm Chemosensory receptor DUF3671 PF12420.8 ORF96392 - 0.022 14.8 3.7 0.048 13.7 3.7 1.6 1 0 0 1 1 1 0 Protein of unknown function VKOR PF07884.14 ORF96392 - 0.056 13.6 0.2 0.084 13.1 0.2 1.2 1 0 0 1 1 1 0 Vitamin K epoxide reductase family RXT2_N PF08595.11 ORF96392 - 0.083 12.9 10.6 0.039 14.0 8.3 1.5 1 1 0 1 1 1 0 RXT2-like, N-terminal NS3_envE PF02723.14 ORF96392 - 0.087 12.9 0.7 0.087 12.9 0.7 1.7 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E PIG-Y PF15159.6 ORF96392 - 0.51 11.3 4.2 1.1 10.2 4.2 1.5 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF2207 PF09972.9 ORF96392 - 3.7 6.2 9.5 0.13 11.0 1.9 1.9 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) Pkinase PF00069.25 ORF92819 - 2.1e-59 201.1 0.6 2.4e-59 200.9 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92819 - 3.3e-36 124.9 0.1 4.1e-36 124.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF92819 - 9.6e-07 28.4 0.0 1.4e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF92819 - 1.9e-06 26.9 0.1 8.9e-06 24.7 0.0 1.9 1 1 1 2 2 2 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF92819 - 0.001 18.2 0.0 0.0019 17.3 0.0 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 Haspin_kinase PF12330.8 ORF92819 - 0.0027 16.7 0.4 0.0049 15.9 0.4 1.5 1 0 0 1 1 1 1 Haspin like kinase domain cNMP_binding PF00027.29 ORF86145 - 1.6e-38 130.7 0.0 4.2e-18 65.2 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Thioredoxin PF00085.20 ORF85076 - 8.5e-17 61.0 0.5 1.5e-16 60.2 0.0 1.6 2 0 0 2 2 2 1 Thioredoxin OST3_OST6 PF04756.13 ORF85076 - 1.3e-08 34.5 0.3 2.2e-08 33.8 0.3 1.3 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 ORF85076 - 8.3e-07 29.4 0.1 1.8e-06 28.4 0.1 1.6 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_6 PF13848.6 ORF85076 - 8e-05 22.6 1.2 0.00027 20.9 0.3 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain TraF PF13728.6 ORF85076 - 0.00034 20.5 0.3 0.00066 19.6 0.0 1.6 2 0 0 2 2 2 1 F plasmid transfer operon protein Thioredoxin_4 PF13462.6 ORF85076 - 0.02 15.0 2.6 0.027 14.6 1.2 2.0 2 1 0 2 2 2 0 Thioredoxin Thioredoxin_8 PF13905.6 ORF85076 - 0.12 12.7 2.3 0.19 12.1 0.4 2.2 2 1 0 2 2 2 0 Thioredoxin-like HyaE PF07449.11 ORF85076 - 0.15 12.0 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Pkinase PF00069.25 ORF83919 - 3.8e-53 180.6 0.0 4.9e-53 180.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF83919 - 4.8e-25 88.3 0.1 6.6e-25 87.9 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF83919 - 0.0035 16.7 0.0 0.0058 16.0 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF83919 - 0.0042 16.5 0.0 0.032 13.6 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF83919 - 0.025 13.5 0.1 0.032 13.2 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain EF-hand_1 PF00036.32 ORF82581 - 2.6e-07 29.7 0.3 6.1e-05 22.3 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF82581 - 3.7e-07 30.5 0.3 0.00021 21.7 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF82581 - 4.2e-06 26.3 0.5 0.0032 17.3 0.0 3.5 3 0 0 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF82581 - 2.8e-05 23.9 0.2 0.0025 17.6 0.0 3.0 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF82581 - 0.00033 20.0 0.4 0.0021 17.5 0.1 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF82581 - 0.015 15.2 0.2 0.33 10.9 0.0 2.6 3 0 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand zf-CW PF07496.15 ORF80385 - 0.018 15.1 3.1 0.88 9.6 0.7 3.2 2 0 0 2 2 2 0 CW-type Zinc Finger Pkinase PF00069.25 ORF78549 - 2.1e-59 201.1 0.6 2.4e-59 200.9 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78549 - 3.3e-36 124.9 0.1 4.1e-36 124.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF78549 - 9.6e-07 28.4 0.0 1.4e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF78549 - 1.9e-06 26.9 0.1 8.9e-06 24.7 0.0 1.9 1 1 1 2 2 2 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF78549 - 0.001 18.2 0.0 0.0019 17.3 0.0 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 Haspin_kinase PF12330.8 ORF78549 - 0.0027 16.7 0.4 0.0049 15.9 0.4 1.5 1 0 0 1 1 1 1 Haspin like kinase domain zf-HC5HC2H_2 PF13832.6 ORF77944 - 2.2e-10 40.7 7.5 2.3e-10 40.6 5.7 2.0 1 1 0 1 1 1 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 ORF77944 - 7.3e-09 35.8 11.1 7.3e-09 35.8 11.1 2.8 2 1 0 2 2 2 1 PHD-like zinc-binding domain SPOUT_MTase PF02590.17 ORF77944 - 0.49 10.4 5.1 0.73 9.8 2.9 2.3 1 1 1 2 2 2 0 Predicted SPOUT methyltransferase MOZ_SAS PF01853.18 ORF76248 - 0.028 14.1 0.4 0.028 14.1 0.4 1.9 2 1 0 2 2 2 0 MOZ/SAS family Acetyltransf_10 PF13673.7 ORF76248 - 0.034 14.1 0.0 0.074 13.0 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain STI1 PF17830.1 ORF75661 - 2.1e-14 53.2 6.6 3.5e-14 52.4 6.6 1.4 1 0 0 1 1 1 1 STI1 domain TPR_2 PF07719.17 ORF75661 - 0.00013 21.8 10.8 0.015 15.4 0.1 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF75661 - 0.00085 19.4 0.4 0.0016 18.5 0.4 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF75661 - 0.0023 18.2 0.8 0.011 16.1 0.0 2.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF75661 - 0.0025 17.6 7.6 0.16 11.9 0.2 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat Rrn6 PF10214.9 ORF75661 - 0.0026 16.3 3.5 0.0036 15.9 3.5 1.0 1 0 0 1 1 1 1 RNA polymerase I-specific transcription-initiation factor DUF4572 PF15139.6 ORF75661 - 0.028 14.3 1.3 0.04 13.8 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4572) TPR_8 PF13181.6 ORF75661 - 0.12 12.7 2.3 3 8.3 0.1 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat PTPRCAP PF15713.5 ORF75661 - 0.73 10.1 6.5 0.15 12.3 3.2 1.4 2 0 0 2 2 2 0 Protein tyrosine phosphatase receptor type C-associated TPR_12 PF13424.6 ORF75661 - 2.1 8.7 5.5 0.62 10.4 0.2 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Peptidase_U57 PF05582.12 ORF75661 - 3.1 7.0 4.5 4.4 6.5 4.5 1.1 1 0 0 1 1 1 0 YabG peptidase U57 Atg14 PF10186.9 ORF75661 - 9.3 5.2 8.6 13 4.8 8.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 RNase_Zc3h12a PF11977.8 ORF64968 - 5.4e-07 29.5 0.0 7.3e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Zc3h12a-like Ribonuclease NYN domain NPR3 PF03666.13 ORF64968 - 0.063 12.1 0.0 0.084 11.6 0.0 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DPPIV_N PF00930.21 ORF64007 - 0.0055 15.5 0.3 0.0088 14.8 0.3 1.2 1 0 0 1 1 1 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region Phage_TAC_5 PF08890.11 ORF62996 - 0.9 9.5 5.2 0.15 12.1 1.2 1.7 2 0 0 2 2 2 0 Phage XkdN-like tail assembly chaperone protein, TAC UQ_con PF00179.26 ORF62103 - 3.8e-33 114.1 0.0 8.2e-33 113.0 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Colipase PF01114.18 ORF62103 - 0.16 11.6 0.1 0.37 10.5 0.1 1.5 1 0 0 1 1 1 0 Colipase, N-terminal domain Sulfotransfer_1 PF00685.27 ORF61728 - 0.00025 20.6 0.0 0.00037 20.1 0.0 1.3 1 0 0 1 1 1 1 Sulfotransferase domain zf-HC5HC2H_2 PF13832.6 ORF59098 - 2.2e-10 40.7 7.5 2.3e-10 40.6 5.7 2.0 1 1 0 1 1 1 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 ORF59098 - 7.3e-09 35.8 11.1 7.3e-09 35.8 11.1 2.8 2 1 0 2 2 2 1 PHD-like zinc-binding domain SPOUT_MTase PF02590.17 ORF59098 - 0.49 10.4 5.1 0.73 9.8 2.9 2.3 1 1 1 2 2 2 0 Predicted SPOUT methyltransferase Toxin_trans PF07952.12 ORF58844 - 0.03 13.4 0.1 0.049 12.7 0.1 1.3 1 0 0 1 1 1 0 Clostridium neurotoxin, Translocation domain Flg_bbr_C PF06429.13 ORF55393 - 1.9e-08 34.3 2.1 4.4e-08 33.1 2.1 1.6 1 0 0 1 1 1 1 Flagellar basal body rod FlgEFG protein C-terminal AAA_11 PF13086.6 ORF51696 - 3.1e-17 63.2 0.1 9.2e-14 51.8 0.0 2.5 2 1 1 3 3 3 2 AAA domain AAA_12 PF13087.6 ORF51696 - 3.7e-10 39.7 0.0 5.4e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF51696 - 1.4e-07 31.4 0.0 3e-07 30.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF51696 - 3.1e-05 24.3 0.0 5.3e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF51696 - 0.00093 19.0 0.0 0.0017 18.1 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase Integrase_Zn PF02022.19 ORF46709 - 0.0017 18.3 9.3 2.9 7.9 0.0 5.0 5 0 0 5 5 5 4 Integrase Zinc binding domain adh_short PF00106.25 ORF45250 - 2.2e-42 144.8 0.3 3.1e-42 144.3 0.3 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF45250 - 7.3e-28 97.7 0.2 1.2e-27 97.0 0.2 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF45250 - 3.8e-08 33.5 1.1 2.7e-07 30.7 1.1 1.9 1 1 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 ORF45250 - 0.0041 17.0 0.2 0.0073 16.2 0.2 1.4 1 0 0 1 1 1 1 NAD(P)H-binding ApbA PF02558.16 ORF45250 - 0.064 12.9 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Epimerase PF01370.21 ORF45250 - 0.18 11.2 0.1 0.58 9.6 0.0 1.7 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family Wtap PF17098.5 ORF40121 - 0.00077 19.4 15.4 0.00077 19.4 15.4 4.2 1 1 2 3 3 2 1 WTAP/Mum2p family Herpes_BLRF2 PF05812.12 ORF40121 - 0.0042 17.2 1.8 0.0042 17.2 1.8 4.6 2 2 3 5 5 5 2 Herpesvirus BLRF2 protein Atg14 PF10186.9 ORF40121 - 0.0051 15.9 19.5 0.0051 15.9 19.5 2.5 2 0 0 2 2 2 1 Vacuolar sorting 38 and autophagy-related subunit 14 Cep57_CLD_2 PF14197.6 ORF40121 - 0.0095 16.0 40.6 0.016 15.3 7.8 5.6 2 2 2 4 4 4 2 Centrosome localisation domain of PPC89 CEP63 PF17045.5 ORF40121 - 0.013 15.4 11.9 0.013 15.4 11.9 3.2 1 1 2 3 3 3 0 Centrosomal protein of 63 kDa EPSP_synthase PF00275.20 ORF40121 - 0.055 12.2 1.1 0.11 11.2 1.1 1.4 1 0 0 1 1 1 0 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FlaC_arch PF05377.11 ORF40121 - 0.088 13.2 39.5 0.16 12.4 4.3 5.8 4 1 0 5 5 5 0 Flagella accessory protein C (FlaC) Lebercilin PF15619.6 ORF40121 - 0.49 10.0 53.9 0.027 14.1 9.1 3.4 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease HrpB7 PF09486.10 ORF40121 - 0.55 10.6 11.2 2.8 8.3 1.2 3.2 2 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) ATG16 PF08614.11 ORF40121 - 1.7 8.9 50.1 1.2 9.4 28.3 3.4 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) GrpE PF01025.19 ORF40121 - 3.9 7.1 52.4 2.5 7.7 15.5 3.8 1 1 3 4 4 4 0 GrpE Fez1 PF06818.15 ORF40121 - 3.9 7.9 46.4 54 4.2 30.2 2.8 1 1 1 2 2 2 0 Fez1 TPR_MLP1_2 PF07926.12 ORF40121 - 4.6 7.3 56.4 1 9.4 22.4 3.5 2 1 2 4 4 4 0 TPR/MLP1/MLP2-like protein TACC_C PF05010.14 ORF40121 - 6.1 6.6 53.5 0.29 10.9 30.5 2.8 1 1 2 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HOOK PF05622.12 ORF40121 - 8.9 4.3 54.7 0.53 8.4 45.8 2.1 1 1 1 2 2 2 0 HOOK protein PhyH PF05721.13 ORF35305 - 0.00023 21.5 0.1 0.0039 17.5 0.1 2.4 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Asp_Arg_Hydrox PF05118.15 ORF35305 - 0.074 12.9 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase Pkinase PF00069.25 ORF34304 - 2.1e-59 201.1 0.6 2.4e-59 200.9 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF34304 - 3.3e-36 124.9 0.1 4.1e-36 124.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF34304 - 9.6e-07 28.4 0.0 1.4e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF34304 - 1.9e-06 26.9 0.1 8.9e-06 24.7 0.0 1.9 1 1 1 2 2 2 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF34304 - 0.001 18.2 0.0 0.0019 17.3 0.0 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 Haspin_kinase PF12330.8 ORF34304 - 0.0027 16.7 0.4 0.0049 15.9 0.4 1.5 1 0 0 1 1 1 1 Haspin like kinase domain Trypan_PARP PF05887.11 ORF30702 - 0.2 11.6 7.8 0.41 10.6 7.8 1.5 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) NAPRTase PF04095.16 ORF27493 - 4.8e-31 108.2 0.0 5.8e-31 107.9 0.0 1.1 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family DUF1160 PF06648.11 ORF17680 - 0.3 11.1 4.3 0.37 10.8 0.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1160) zf-RING_13 PF17977.1 ORF17210 - 0.0048 17.0 6.5 0.012 15.7 6.5 1.6 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain ACCA PF03255.14 ORF15907 - 2.4e-62 209.1 0.1 3.6e-62 208.5 0.1 1.3 1 0 0 1 1 1 1 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Carboxyl_trans PF01039.22 ORF15907 - 7.1e-18 64.5 0.1 8.3e-18 64.3 0.1 1.1 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 ORF15907 - 0.00056 19.5 0.0 0.00085 18.9 0.0 1.2 1 0 0 1 1 1 1 Malonate decarboxylase gamma subunit (MdcE) Med9 PF07544.13 ORF15907 - 0.065 13.3 0.2 0.14 12.3 0.2 1.5 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 PseudoU_synth_2 PF00849.22 ORF152179 - 8.3e-30 104.0 0.0 1.4e-29 103.3 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 ORF152179 - 6.8e-11 41.7 0.3 1.2e-10 40.9 0.3 1.5 1 0 0 1 1 1 1 S4 domain DUF3603 PF12227.8 ORF152179 - 0.1 11.9 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3603) GNT-I PF03071.15 ORF14132 - 6.1e-07 28.6 0.1 1.4e-06 27.3 0.1 1.7 1 1 0 1 1 1 1 GNT-I family Chitin_bind_1 PF00187.19 ORF14132 - 0.01 16.3 15.9 0.01 16.3 15.9 1.9 2 0 0 2 2 2 0 Chitin recognition protein zf-RING_13 PF17977.1 ORF139485 - 0.0048 17.0 6.5 0.012 15.7 6.5 1.6 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain TM231 PF10149.9 ORF13741 - 3.4e-39 135.0 7.3 3.8e-39 134.8 7.3 1.0 1 0 0 1 1 1 1 Transmembrane protein 231 Pex24p PF06398.11 ORF13741 - 0.015 14.3 0.8 0.054 12.5 0.8 1.8 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin DPPIV_N PF00930.21 ORF134906 - 0.0055 15.5 0.3 0.0088 14.8 0.3 1.2 1 0 0 1 1 1 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region Phage_TAC_5 PF08890.11 ORF133975 - 0.9 9.5 5.2 0.15 12.1 1.2 1.7 2 0 0 2 2 2 0 Phage XkdN-like tail assembly chaperone protein, TAC Hexapep PF00132.24 ORF128878 - 0.00013 21.6 6.5 0.0071 16.0 1.3 3.1 3 0 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF128878 - 0.0009 18.9 0.3 0.0009 18.9 0.3 3.1 3 1 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase Peptidase_S51 PF03575.17 ORF127048 - 3.4e-25 88.9 0.0 3.4e-24 85.7 0.0 2.0 1 1 0 1 1 1 1 Peptidase family S51 ADK PF00406.22 ORF125046 - 5.2e-54 182.4 0.0 6.9e-54 182.0 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF125046 - 4.3e-24 85.5 0.0 8.3e-24 84.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain ADK_lid PF05191.14 ORF125046 - 1.9e-12 46.9 0.0 3.7e-12 46.0 0.0 1.5 1 0 0 1 1 1 1 Adenylate kinase, active site lid Hydin_ADK PF17213.3 ORF125046 - 0.00023 21.5 0.2 0.19 12.0 0.1 2.3 1 1 1 2 2 2 2 Hydin Adenylate kinase-like domain AAA_33 PF13671.6 ORF125046 - 0.059 13.5 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain TPR_14 PF13428.6 ORF124094 - 1.5e-06 28.5 2.4 0.027 15.3 0.1 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF124094 - 1.5e-06 28.1 0.4 0.0031 17.5 0.1 2.4 2 0 0 2 2 2 2 Fis1 C-terminal tetratricopeptide repeat TPR_2 PF07719.17 ORF124094 - 1.1e-05 25.2 0.2 0.0037 17.3 0.1 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF124094 - 1.2e-05 25.4 0.1 3.1e-05 24.0 0.1 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF124094 - 1.9e-05 24.3 0.3 6.3e-05 22.6 0.2 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF124094 - 0.00021 21.7 5.7 0.051 14.1 0.4 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF124094 - 0.00063 19.8 0.1 0.0067 16.6 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF124094 - 0.0046 17.6 2.7 0.021 15.5 0.0 3.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF124094 - 0.006 16.2 0.2 0.016 14.9 0.0 1.8 2 0 0 2 2 2 1 TPR repeat TPR_17 PF13431.6 ORF124094 - 0.2 12.1 0.7 17 6.1 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat Methyltrans_Mon PF14314.6 ORF121140 - 0.16 10.0 0.0 0.22 9.5 0.0 1.1 1 0 0 1 1 1 0 Virus-capping methyltransferase Sulfotransfer_1 PF00685.27 ORF11746 - 0.00025 20.6 0.0 0.00037 20.1 0.0 1.3 1 0 0 1 1 1 1 Sulfotransferase domain DUF3492 PF11997.8 ORF116585 - 1.9 8.1 5.4 1.3 8.7 1.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3492) BPD_transp_1 PF00528.22 ORF11479 - 2e-17 63.5 20.4 2e-17 63.5 20.4 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1158 PF06643.11 ORF11479 - 0.059 13.9 0.1 0.059 13.9 0.1 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1158) Thioredoxin_14 PF18402.1 ORF112893 - 0.00039 20.5 0.1 0.13 12.2 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin-like domain DUF4111 PF13427.6 ORF105933 - 0.0096 16.1 0.1 0.034 14.3 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4111) DUF4905 PF16248.5 ORF105933 - 0.24 11.3 0.1 0.24 11.3 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4905) EF-hand_1 PF00036.32 ORF105601 - 2.6e-07 29.7 0.3 6.1e-05 22.3 0.1 2.6 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF105601 - 3.7e-07 30.5 0.3 0.00021 21.7 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF105601 - 4.2e-06 26.3 0.5 0.0032 17.3 0.0 3.5 3 0 0 3 3 3 1 EF-hand domain EF-hand_8 PF13833.6 ORF105601 - 2.8e-05 23.9 0.2 0.0025 17.6 0.0 3.0 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF105601 - 0.00033 20.0 0.4 0.0021 17.5 0.1 2.5 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF105601 - 0.015 15.2 0.2 0.33 10.9 0.0 2.6 3 0 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand Mitofilin PF09731.9 NODE_20953_length_952_cov_408.979280_g16101_i0reverse_frame_1 - 0.49 9.2 12.0 0.11 11.4 8.3 1.6 2 0 0 2 2 2 0 Mitochondrial inner membrane protein TMEM61 PF15105.6 NODE_20953_length_952_cov_408.979280_g16101_i0reverse_frame_1 - 2 8.2 8.2 3.4 7.5 8.2 1.4 1 0 0 1 1 1 0 TMEM61 protein family Ndc1_Nup PF09531.10 NODE_20953_length_952_cov_408.979280_g16101_i0reverse_frame_1 - 2.5 6.7 8.2 2.7 6.6 8.2 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup TPR_10 PF13374.6 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 2.2e-21 75.0 22.2 4.8e-05 23.1 0.0 6.6 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 3.2e-20 72.2 22.7 8.3e-07 29.2 0.3 4.9 2 1 2 5 5 5 4 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 0.0024 18.4 29.3 0.62 10.9 0.9 6.1 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 0.0034 17.9 20.8 1.2 9.6 0.9 5.3 2 1 3 5 5 5 4 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 0.02 14.7 4.4 12 5.9 0.1 4.6 5 0 0 5 5 5 0 Tetratricopeptide repeat CSN5_C PF18323.1 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 0.066 14.1 0.1 0.23 12.4 0.1 2.0 1 0 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain TPR_2 PF07719.17 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 0.13 12.5 18.4 3.7 7.9 0.4 5.9 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 0.21 12.3 26.7 1.3 9.8 1.0 5.9 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 0.43 10.9 5.6 19 5.8 0.0 4.2 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_5 PF12688.7 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 0.84 9.9 13.7 1.1 9.5 5.8 3.3 2 1 1 3 3 3 0 Tetratrico peptide repeat TPR_7 PF13176.6 NODE_20880_length_954_cov_431.673558_g16037_i0forward_frame_1 - 4.6 7.5 16.2 5.3 7.3 0.1 5.1 6 0 0 6 6 6 0 Tetratricopeptide repeat Sulfate_transp PF00916.20 ORF98971 - 6.2e-06 25.2 2.5 7.9e-06 24.9 2.5 1.2 1 0 0 1 1 1 1 Sulfate permease family RIFIN PF02009.16 ORF92612 - 2.8 7.7 7.9 4.8 7.0 7.9 1.3 1 0 0 1 1 1 0 Rifin Rib_5-P_isom_A PF06026.14 ORF90213 - 7.7e-66 221.0 0.0 9.9e-66 220.6 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Glyco_transf_56 PF07429.11 ORF8977 - 1.6e-93 313.7 0.0 1.9e-93 313.5 0.0 1.1 1 0 0 1 1 1 1 4-alpha-L-fucosyltransferase glycosyl transferase group 56 Asp PF00026.23 ORF86476 - 8.9e-08 31.9 2.4 7.7e-07 28.8 2.2 2.0 1 1 1 2 2 2 2 Eukaryotic aspartyl protease Rib_5-P_isom_A PF06026.14 ORF81753 - 7.7e-66 221.0 0.0 9.9e-66 220.6 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DUF4441 PF14536.6 ORF81630 - 1.3 9.3 14.1 1.3 9.2 10.8 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4441) FlaF PF07309.11 ORF81469 - 0.15 12.1 0.1 0.24 11.4 0.1 1.3 1 0 0 1 1 1 0 Flagellar protein FlaF Whib PF02467.16 ORF79587 - 4.9 7.8 7.1 6.9 7.3 1.0 2.7 1 1 1 2 2 2 0 Transcription factor WhiB MORN PF02493.20 ORF79231 - 1.2e-29 100.4 37.3 2.5e-06 27.0 0.7 8.1 8 0 0 8 8 8 7 MORN repeat zf_C2H2_13 PF18508.1 ORF79231 - 0.091 12.4 2.4 0.16 11.6 2.4 1.4 1 0 0 1 1 1 0 Zinc finger domain XAF1_C PF18608.1 ORF79231 - 0.11 12.1 1.4 0.29 10.7 1.4 1.6 1 0 0 1 1 1 0 XIAP-associated factor 1 C-terminal domain zf-TRAF PF02176.18 ORF79231 - 0.19 12.4 3.7 0.56 10.9 3.8 1.7 1 1 0 1 1 1 0 TRAF-type zinc finger TRAF6_Z2 PF18048.1 ORF79231 - 0.22 11.6 1.3 0.43 10.7 1.3 1.5 1 0 0 1 1 1 0 TNF receptor-associated factor 6 zinc finger 2 Helicase_C PF00271.31 ORF77367 - 1.7e-29 102.4 0.1 8.7e-29 100.1 0.0 2.0 2 1 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF77367 - 7.2e-18 65.0 0.0 3.4e-17 62.8 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 ORF77367 - 0.004 16.4 0.0 0.006 15.8 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase CMS1 PF14617.6 ORF77367 - 0.0043 16.4 0.1 0.0081 15.5 0.1 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit DUF5532 PF17673.1 ORF77367 - 0.18 11.9 0.0 0.44 10.6 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5532) BPD_transp_1 PF00528.22 ORF7619 - 0.039 13.7 1.0 0.039 13.7 1.0 2.7 2 1 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component DUF2207 PF09972.9 ORF7619 - 0.045 12.5 7.6 0.25 10.0 1.4 2.2 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) Cytochrom_B_C PF00032.17 ORF73842 - 4.4 7.7 9.8 2.4 8.5 4.5 2.6 2 1 1 3 3 3 0 Cytochrome b(C-terminal)/b6/petD DUF4441 PF14536.6 ORF71175 - 2.8 8.1 15.4 23 5.2 15.4 2.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4441) Pkinase PF00069.25 ORF67701 - 4.7e-54 183.5 0.0 5.4e-54 183.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67701 - 1.6e-25 89.9 0.0 2e-25 89.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF67701 - 0.00011 21.6 0.0 0.00018 20.9 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF67701 - 0.011 14.7 0.0 0.016 14.2 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain PAF-AH_p_II PF03403.13 ORF65948 - 1.4e-27 96.2 0.2 6.8e-26 90.7 0.2 2.5 1 1 0 1 1 1 1 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 ORF65948 - 5.7e-06 25.4 0.0 9.3e-06 24.7 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme Hydrolase_4 PF12146.8 ORF65948 - 4.8e-05 22.8 0.2 0.00018 20.8 0.2 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF65948 - 0.0014 19.3 0.0 0.0015 19.2 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF65948 - 0.0076 15.9 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 ORF65948 - 0.011 14.4 0.0 0.019 13.7 0.0 1.3 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Chlorophyllase PF07224.11 ORF65948 - 0.026 13.5 0.0 1.2 8.1 0.0 2.1 2 0 0 2 2 2 0 Chlorophyllase DLH PF01738.18 ORF65948 - 0.051 13.1 0.0 0.12 11.9 0.0 1.5 1 1 0 1 1 1 0 Dienelactone hydrolase family Chloroa_b-bind PF00504.21 ORF63464 - 2.3e-29 103.0 0.7 8.4e-29 101.2 0.1 2.0 2 0 0 2 2 2 1 Chlorophyll A-B binding protein IATP PF04568.12 ORF63464 - 2 8.9 5.8 3.9 8.0 5.8 1.5 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP Lipase_3 PF01764.25 ORF63252 - 1.3e-31 109.4 0.0 1.9e-31 108.8 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Hydrolase_4 PF12146.8 ORF63252 - 0.0028 17.0 0.0 0.0043 16.3 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF63252 - 0.012 15.2 0.1 0.04 13.5 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2974) Cutinase PF01083.22 ORF63252 - 0.018 15.0 0.0 0.039 13.9 0.0 1.5 1 0 0 1 1 1 0 Cutinase Abhydrolase_6 PF12697.7 ORF63252 - 0.089 13.4 0.0 0.12 13.0 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase family ART PF01129.18 ORF61153 - 3e-05 23.4 0.2 5.8e-05 22.5 0.2 1.6 1 1 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase ART PF01129.18 ORF60919 - 0.00026 20.4 0.2 0.00044 19.6 0.2 1.5 1 1 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase Tra_M PF05261.11 ORF60919 - 0.041 13.9 0.8 0.084 12.9 0.8 1.5 1 0 0 1 1 1 0 TraM protein, DNA-binding LRR_6 PF13516.6 ORF60758 - 3.5e-05 23.5 0.7 0.16 12.1 0.0 3.5 3 0 0 3 3 3 2 Leucine Rich repeat Glyco_hydro_38C PF07748.13 ORF59130 - 2.7e-12 47.2 0.0 5.4e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Glyco_hydro38C2 PF17677.1 ORF59130 - 1.6e-05 24.9 0.0 3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Glyco_hydro_38C PF07748.13 ORF58595 - 2.7e-12 47.2 0.0 5.4e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Glyco_hydro38C2 PF17677.1 ORF58595 - 1.6e-05 24.9 0.0 3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain TPR_14 PF13428.6 ORF54862 - 0.0016 19.1 0.3 21 6.2 0.0 4.2 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF54862 - 0.059 13.5 0.2 29 5.1 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF54862 - 0.062 13.2 0.5 21 5.1 0.0 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF54862 - 0.085 13.1 0.3 53 4.4 0.0 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat TPP_enzyme_C PF02775.21 ORF54485 - 7e-51 172.0 0.0 1e-50 171.5 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF54485 - 5e-23 81.4 0.1 1.2e-22 80.1 0.1 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain XFP_N PF09364.10 ORF54485 - 0.048 12.5 0.2 0.1 11.4 0.1 1.5 1 1 1 2 2 2 0 XFP N-terminal domain Hydrolase_4 PF12146.8 ORF48048 - 7.4e-06 25.4 0.0 3.4e-05 23.2 0.0 1.9 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF48048 - 8.3e-05 22.4 0.1 0.00016 21.4 0.1 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 ORF48048 - 0.0017 17.1 0.2 0.71 8.5 0.0 2.2 1 1 1 2 2 2 2 Acetyl xylan esterase (AXE1) Abhydrolase_2 PF02230.16 ORF48048 - 0.15 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase Acyl_transf_1 PF00698.21 ORF44741 - 2e-16 60.4 0.0 2.7e-16 60.0 0.0 1.0 1 0 0 1 1 1 1 Acyl transferase domain DUF4056 PF13265.6 ORF44741 - 0.054 12.8 0.0 0.096 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4056) Acyltransferase PF01553.21 ORF43634 - 6.8e-09 35.5 0.1 1.8e-08 34.1 0.1 1.7 1 1 0 1 1 1 1 Acyltransferase CRAL_TRIO PF00650.20 ORF41569 - 3.2e-18 65.9 0.0 4.5e-18 65.5 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain DUF733 PF05306.11 ORF39713 - 0.2 12.0 3.5 0.22 11.8 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF733) SET PF00856.28 ORF34862 - 5e-07 30.3 0.0 1.4e-06 28.8 0.0 1.7 1 1 0 1 1 1 1 SET domain ANAPC2 PF08672.11 ORF34862 - 0.16 12.5 0.0 0.41 11.2 0.0 1.6 1 0 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 Whib PF02467.16 ORF32483 - 4.9 7.8 7.1 6.9 7.3 1.0 2.7 1 1 1 2 2 2 0 Transcription factor WhiB Ank_2 PF12796.7 ORF31916 - 1.8e-19 70.1 0.0 2.2e-15 57.0 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF31916 - 2e-17 63.3 0.0 4.7e-12 46.2 0.0 3.4 3 1 0 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF31916 - 3e-16 59.0 0.7 0.00016 22.0 0.0 3.9 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF31916 - 1.3e-12 46.7 0.0 0.0013 19.0 0.0 4.6 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF31916 - 6.4e-12 45.5 0.1 1.2e-06 28.7 0.0 3.7 2 1 1 3 3 3 2 Ankyrin repeats (many copies) TPR_2 PF07719.17 ORF31916 - 6e-07 29.1 4.3 0.018 15.1 1.2 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF31916 - 2.1e-06 28.2 2.7 6.8e-06 26.5 2.7 2.0 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF31916 - 7.8e-05 23.2 15.5 0.00032 21.3 5.8 3.2 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF31916 - 0.00011 22.2 7.0 0.00022 21.3 7.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF31916 - 0.00024 21.1 2.2 0.1 12.7 0.5 3.0 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TPR_1 PF00515.28 ORF31916 - 0.0054 16.5 1.0 0.03 14.1 0.4 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat PTE PF02126.18 ORF31916 - 0.0096 15.4 0.0 0.08 12.4 0.0 1.9 2 0 0 2 2 2 1 Phosphotriesterase family TPR_14 PF13428.6 ORF31916 - 0.026 15.3 17.4 0.043 14.6 5.3 4.3 3 1 2 5 5 4 0 Tetratricopeptide repeat TPR_20 PF14561.6 ORF31916 - 0.027 14.8 1.2 0.087 13.2 1.2 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF31916 - 0.039 14.2 0.5 0.077 13.2 0.5 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 GATase_7 PF13537.6 ORF31916 - 0.16 11.9 0.0 3.1 7.7 0.0 2.6 2 1 0 2 2 2 0 Glutamine amidotransferase domain TPR_12 PF13424.6 ORF31916 - 1.1 9.6 11.8 5.7 7.3 0.2 3.3 2 1 1 3 3 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF31916 - 9.2 6.3 11.5 6.9 6.7 1.5 3.5 4 0 0 4 4 4 0 Tetratricopeptide repeat HHH_9 PF17674.1 ORF16539 - 1.4 9.9 4.5 4.9 8.1 0.0 3.1 3 0 0 3 3 3 0 HHH domain Actin PF00022.19 ORF149182 - 2.5e-11 42.8 3.0 6.9e-10 38.1 3.0 2.1 1 1 0 1 1 1 1 Actin DUF2738 PF10927.8 ORF149182 - 0.0087 15.2 0.8 0.012 14.7 0.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2738) DUF2573 PF10835.8 ORF149182 - 0.015 15.6 0.8 0.036 14.4 0.8 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2573) Peptidase_M75 PF09375.10 ORF149182 - 0.042 13.3 0.0 0.062 12.8 0.0 1.2 1 0 0 1 1 1 0 Imelysin PBECR3 PF18812.1 ORF149182 - 0.054 13.5 1.1 0.14 12.1 1.1 1.6 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 Activin_recp PF01064.23 ORF149182 - 1.3 10.2 7.2 0.2 12.8 2.4 2.1 2 0 0 2 2 2 0 Activin types I and II receptor domain 7tm_7 PF08395.12 ORF147738 - 0.45 9.7 18.2 0.017 14.3 9.5 2.0 1 1 1 2 2 2 0 7tm Chemosensory receptor DUF2206 PF09971.9 ORF147738 - 1.8 7.3 14.7 2.6 6.7 14.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) TFIIA PF03153.13 ORF147738 - 8.7 6.2 10.7 11 5.8 10.7 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit MSP PF01716.18 ORF147383 - 3.3e-80 268.8 0.4 3.9e-80 268.5 0.4 1.0 1 0 0 1 1 1 1 Manganese-stabilising protein / photosystem II polypeptide PP2C PF00481.21 ORF146994 - 4.3e-14 52.8 5.0 1.8e-13 50.8 4.3 2.3 2 1 0 2 2 2 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF146994 - 0.0015 18.2 0.0 0.0028 17.3 0.0 1.4 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF146994 - 0.08 12.8 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) Sof1 PF04158.14 ORF146994 - 3 8.2 9.7 0.48 10.7 0.7 2.7 2 0 0 2 2 2 0 Sof1-like domain His_Phos_1 PF00300.22 ORF143782 - 2.1e-14 53.7 0.0 7.9e-09 35.5 0.0 2.9 2 1 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) LIDHydrolase PF10230.9 ORF143782 - 0.0064 16.1 0.3 0.012 15.2 0.3 1.5 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase STAT_alpha PF01017.20 ORF143782 - 0.028 14.3 3.6 1 9.2 0.4 2.2 2 0 0 2 2 2 0 STAT protein, all-alpha domain Swm2 PF17083.5 ORF143782 - 0.039 14.0 0.6 0.12 12.4 0.6 1.8 1 0 0 1 1 1 0 Nucleolar protein Swm2 DNA_pol3_delta2 PF13177.6 ORF143782 - 0.057 13.2 1.1 0.099 12.4 1.1 1.4 1 0 0 1 1 1 0 DNA polymerase III, delta subunit DUF2433 PF10360.9 ORF143782 - 0.082 13.0 0.2 0.19 11.8 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) CHB_HEX_C_1 PF13290.6 ORF141732 - 5.3e-09 36.0 0.1 1.1e-08 34.9 0.1 1.5 1 0 0 1 1 1 1 Chitobiase/beta-hexosaminidase C-terminal domain Fn3_assoc PF13287.6 ORF141732 - 5.3e-08 32.9 0.1 1.7e-07 31.3 0.1 1.9 1 0 0 1 1 1 1 Fn3 associated DegV PF02645.16 ORF141732 - 0.12 11.7 3.5 0.18 11.1 3.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 RecG_N PF17190.4 ORF141732 - 0.38 11.5 8.8 0.11 13.2 4.1 2.1 1 1 1 2 2 2 0 RecG N-terminal helical domain LUC7 PF03194.15 ORF141732 - 3.2 7.4 10.3 6.6 6.3 10.3 1.5 1 1 0 1 1 1 0 LUC7 N_terminus Ank_2 PF12796.7 ORF132378 - 1.1e-20 74.0 0.7 2.5e-06 28.0 0.1 4.2 2 1 3 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF132378 - 7.7e-17 61.4 6.5 1.8e-07 31.6 0.1 5.8 3 2 3 6 6 6 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF132378 - 3.4e-14 52.5 5.3 0.01 16.3 0.0 6.4 5 1 1 6 6 6 3 Ankyrin repeat Ank_3 PF13606.6 ORF132378 - 7.5e-14 50.5 6.3 0.11 13.1 0.0 6.8 6 1 1 7 7 7 5 Ankyrin repeat Ank_5 PF13857.6 ORF132378 - 5.5e-12 45.7 3.5 0.001 19.3 0.1 4.1 4 0 0 4 4 4 3 Ankyrin repeats (many copies) DUF2795 PF11387.8 ORF132378 - 0.031 14.5 1.3 0.78 10.0 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2795) DPBB_1 PF03330.18 ORF130946 - 0.008 16.4 0.0 0.02 15.1 0.0 1.6 1 0 0 1 1 1 1 Lytic transglycolase Presenilin PF01080.17 ORF12897 - 0.26 10.0 17.3 0.32 9.7 17.3 1.1 1 0 0 1 1 1 0 Presenilin Zip PF02535.22 ORF12897 - 0.36 10.0 7.7 0.4 9.8 7.7 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter ESM4 PF15952.5 ORF12897 - 0.54 10.7 19.8 1.1 9.7 19.8 1.5 1 0 0 1 1 1 0 Enhancer of split M4 family SLC12 PF03522.15 ORF12897 - 0.64 9.0 19.3 0.82 8.6 19.3 1.1 1 0 0 1 1 1 0 Solute carrier family 12 V_ATPase_I PF01496.19 ORF12897 - 2.3 6.0 14.4 2.7 5.8 14.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CDC45 PF02724.14 ORF12897 - 2.6 6.2 22.0 3.1 6.0 22.0 1.1 1 0 0 1 1 1 0 CDC45-like protein Smg8_Smg9 PF10220.9 ORF12897 - 3.4 5.9 20.2 4 5.6 20.2 1.1 1 0 0 1 1 1 0 Smg8_Smg9 Allexi_40kDa PF05549.11 ORF12897 - 6.7 6.1 14.5 5 6.5 12.4 1.7 2 0 0 2 2 2 0 Allexivirus 40kDa protein Glyco_hydro_38C PF07748.13 ORF128602 - 2.7e-12 47.2 0.0 5.4e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Glyco_hydro38C2 PF17677.1 ORF128602 - 1.6e-05 24.9 0.0 3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Actin PF00022.19 ORF125712 - 8.4e-11 41.1 3.1 6.6e-10 38.2 0.0 2.0 1 1 1 2 2 2 1 Actin DUF2738 PF10927.8 ORF125712 - 0.0038 16.3 0.9 0.0055 15.8 0.9 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2738) DUF2573 PF10835.8 ORF125712 - 0.024 15.0 1.4 0.054 13.8 1.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2573) Activin_recp PF01064.23 ORF125712 - 1.2 10.3 7.1 0.2 12.8 2.4 2.1 2 0 0 2 2 2 0 Activin types I and II receptor domain Peptidase_C1 PF00112.23 ORF124029 - 9e-50 169.8 5.4 2.3e-49 168.4 5.4 1.7 1 1 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF124029 - 0.00082 18.3 0.1 0.2 10.4 0.0 2.1 2 0 0 2 2 2 2 Peptidase C1-like family HHH_9 PF17674.1 ORF120575 - 1.4 9.9 4.5 4.9 8.1 0.0 3.1 3 0 0 3 3 3 0 HHH domain InaF-motif PF15018.6 ORF116985 - 4.6 7.2 6.1 8.9 6.3 6.1 1.5 1 0 0 1 1 1 0 TRP-interacting helix TFIIA PF03153.13 ORF116935 - 2.7 7.9 7.5 3.5 7.5 7.5 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit SPC25 PF06703.11 ORF116935 - 3.6 7.4 6.8 6.2 6.6 6.8 1.4 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DUF2070 PF09843.9 ORF116935 - 4 5.6 14.3 5.1 5.3 14.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) UCH_1 PF13423.6 ORF115210 - 0.0017 18.0 2.4 0.19 11.3 0.0 2.1 2 0 0 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase C1_2 PF03107.16 ORF115210 - 0.0071 16.6 8.4 0.034 14.5 3.0 2.7 2 0 0 2 2 2 1 C1 domain DUF3945 PF13101.6 ORF115210 - 0.056 13.2 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3945) zinc_ribbon_15 PF17032.5 ORF115210 - 0.3 11.9 6.2 0.6 10.9 0.6 2.4 2 0 0 2 2 2 0 zinc-ribbon family DZR PF12773.7 ORF115210 - 0.86 9.7 5.1 4.6 7.4 5.1 2.0 1 1 0 1 1 1 0 Double zinc ribbon NOB1_Zn_bind PF08772.11 ORF115210 - 2.9 8.1 7.5 2.4 8.4 3.6 2.7 2 1 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Thioredoxin_2 PF13098.6 ORF115210 - 3 8.4 4.9 1.6 9.2 0.4 2.7 3 0 0 3 3 3 0 Thioredoxin-like domain RecR PF02132.15 ORF115210 - 4.3 7.0 6.2 1.5 8.5 2.7 2.0 2 0 0 2 2 2 0 RecR protein PHD_2 PF13831.6 ORF115210 - 7.6 6.2 11.7 0.11 12.0 0.9 3.0 2 1 1 3 3 3 0 PHD-finger zf-H2C2_2 PF13465.6 ORF115210 - 8.7 7.0 11.5 5.9 7.5 0.3 3.7 3 0 0 3 3 3 0 Zinc-finger double domain Lep_receptor_Ig PF06328.11 NODE_20953_length_952_cov_408.979280_g16101_i0forward_frame_3 - 0.089 12.7 1.3 0.2 11.6 1.3 1.5 1 0 0 1 1 1 0 Ig-like C2-type domain Lipase_GDSL_2 PF13472.6 NODE_20906_length_954_cov_90.303591_g16062_i0forward_frame_3 - 0.00059 20.3 0.0 0.0021 18.5 0.0 1.8 1 1 1 2 2 2 1 GDSL-like Lipase/Acylhydrolase family PC-Esterase PF13839.6 NODE_20906_length_954_cov_90.303591_g16062_i0forward_frame_3 - 0.17 11.6 0.0 0.5 10.1 0.0 1.6 2 0 0 2 2 2 0 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Herpes_UL49_2 PF04823.12 NODE_20880_length_954_cov_431.673558_g16037_i0reverse_frame_2 - 0.012 15.7 1.5 0.012 15.7 1.5 2.7 2 1 0 2 2 2 0 Herpesvirus UL49 tegument protein fn2 PF00040.19 NODE_20880_length_954_cov_431.673558_g16037_i0reverse_frame_2 - 1.1 9.6 6.5 0.26 11.6 0.9 2.9 3 0 0 3 3 3 0 Fibronectin type II domain Bac_luciferase PF00296.20 ORF98887 - 3.4e-71 240.2 3.4 3.9e-71 240.0 3.4 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase ATP-synt_DE PF00401.20 ORF98887 - 0.51 10.7 5.1 0.32 11.3 1.5 2.3 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HNH_repeat PF18780.1 ORF98887 - 5 7.0 5.3 0.82 9.5 0.4 2.3 2 0 0 2 2 2 0 Homing endonuclease repeat DUF4200 PF13863.6 ORF96487 - 1e-19 71.0 24.7 1e-19 71.0 24.7 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4200) Lectin_N PF03954.14 ORF96487 - 1.8 8.3 17.4 0.2 11.4 2.6 3.4 3 1 1 4 4 4 0 Hepatic lectin, N-terminal domain ParcG PF10274.9 ORF96273 - 4.1e-78 261.7 0.0 5.5e-78 261.3 0.0 1.2 1 0 0 1 1 1 1 Parkin co-regulated protein DCB PF16213.5 ORF96273 - 0.0007 19.3 0.6 0.0024 17.5 0.1 1.9 2 0 0 2 2 2 1 Dimerisation and cyclophilin-binding domain of Mon2 KH_8 PF17903.1 ORF96273 - 1.5 9.0 3.5 1.2 9.3 0.4 2.3 2 1 1 3 3 3 0 Krr1 KH1 domain FecR PF04773.13 ORF91432 - 2.6e-16 60.0 0.6 3.9e-16 59.5 0.6 1.3 1 0 0 1 1 1 1 FecR protein DUF4880 PF16220.5 ORF91432 - 5.6e-09 35.7 11.5 5.6e-09 35.7 11.5 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4880) DUF4974 PF16344.5 ORF91432 - 4.5e-05 23.4 0.0 9.2e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4974) DUF2570 PF10828.8 ORF91432 - 0.39 10.6 0.0 0.39 10.6 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2570) CDC50 PF03381.15 ORF91185 - 7.6e-80 268.4 0.6 7.6e-80 268.4 0.6 1.6 1 1 1 2 2 2 1 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF2157 PF09925.9 ORF91185 - 0.0059 16.4 0.1 3.7 7.3 0.0 2.2 2 0 0 2 2 2 2 Predicted membrane protein (DUF2157) Peptidase_C1 PF00112.23 ORF90920 - 1.9e-55 188.3 2.9 2.8e-55 187.8 2.9 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF90920 - 1e-10 41.9 0.1 1.6e-10 41.3 0.1 1.3 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF90920 - 0.016 14.0 0.2 1.7 7.3 0.0 2.3 2 0 0 2 2 2 0 Peptidase C1-like family zf-C2H2 PF00096.26 ORF86510 - 1.1e-17 63.3 23.4 5.8e-05 23.3 2.3 4.7 4 0 0 4 4 4 4 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF86510 - 7.3e-17 60.9 24.4 2.2e-07 31.0 1.1 5.8 5 0 0 5 5 5 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF86510 - 6e-12 45.3 30.6 0.00051 20.7 1.5 5.3 6 0 0 6 6 5 4 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF86510 - 1.8e-06 28.0 9.9 0.043 14.1 0.3 4.9 4 0 0 4 4 4 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF86510 - 3.4e-05 24.1 11.0 0.037 14.4 0.8 3.9 3 0 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 ORF86510 - 0.00015 21.6 11.0 0.002 18.1 0.5 4.0 3 0 0 3 3 3 2 C2H2-type zinc finger FOXP-CC PF16159.5 ORF86510 - 0.00037 21.1 2.1 0.032 14.9 0.0 3.2 2 1 1 3 3 3 1 FOXP coiled-coil domain zf-C2H2_8 PF15909.5 ORF86510 - 0.011 16.0 15.3 1.4 9.3 0.3 3.4 1 1 3 4 4 4 0 C2H2-type zinc ribbon DUF4592 PF15262.6 ORF86510 - 0.045 14.4 1.0 0.11 13.2 1.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4592) zf_ZIC PF18366.1 ORF86510 - 0.46 10.6 10.4 3.2 8.0 0.3 4.2 4 0 0 4 4 4 0 Zic proteins zinc finger domain zf_Hakai PF18408.1 ORF86510 - 0.53 10.0 10.9 8.9 6.1 0.3 3.7 2 1 1 3 3 3 0 C2H2 Hakai zinc finger domain BolA PF01722.18 ORF86510 - 0.72 10.2 4.7 70 3.8 0.2 3.1 1 1 1 2 2 2 0 BolA-like protein zf-CGNR PF11706.8 ORF86510 - 2.3 8.1 5.9 13 5.7 0.2 3.3 3 0 0 3 3 3 0 CGNR zinc finger zf_UBZ PF18439.1 ORF86510 - 4.3 7.0 8.8 3.4 7.3 0.1 3.5 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-BED PF02892.15 ORF86510 - 8.3 6.5 13.4 2.3 8.3 2.2 3.8 2 1 2 4 4 4 0 BED zinc finger UPF0240 PF06784.11 ORF83596 - 0.1 12.6 0.5 0.17 11.9 0.5 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0240) DUF5543 PF17697.1 ORF81897 - 0.031 14.6 0.2 0.5 10.7 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5543) Tetraspanin PF00335.20 ORF66022 - 1.5e-10 41.2 3.6 1.5e-10 41.2 3.6 2.0 1 1 1 2 2 2 2 Tetraspanin family SVM_signal PF12113.8 ORF66022 - 0.026 14.4 7.4 0.71 9.8 5.3 2.8 2 0 0 2 2 2 0 SVM protein signal sequence NiFe_hyd_3_EhaA PF17367.2 ORF64683 - 0.097 12.8 0.2 0.73 10.0 0.0 2.4 2 0 0 2 2 2 0 NiFe-hydrogenase-type-3 Eha complex subunit A LRRCT PF01463.24 ORF64683 - 0.11 13.1 9.0 2.2 9.0 0.1 4.8 4 0 0 4 4 4 0 Leucine rich repeat C-terminal domain Phageshock_PspG PF09583.10 ORF64683 - 0.9 9.9 4.8 12 6.3 2.0 3.0 2 1 0 2 2 2 0 Phage shock protein G (Phageshock_PspG) DDE_3 PF13358.6 ORF63984 - 0.0016 18.2 0.0 0.0027 17.5 0.0 1.4 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_1 PF03184.19 ORF63984 - 0.027 14.1 0.0 0.043 13.5 0.0 1.3 1 0 0 1 1 1 0 DDE superfamily endonuclease Thaumatin PF00314.17 ORF59 - 0.014 15.0 0.0 0.033 13.8 0.0 1.5 1 0 0 1 1 1 0 Thaumatin family FIST PF08495.10 ORF59 - 0.1 12.6 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 FIST N domain DUF2306 PF10067.9 ORF57986 - 0.0069 16.6 0.5 0.83 9.9 0.1 2.2 2 0 0 2 2 2 2 Predicted membrane protein (DUF2306) SPATIAL PF15256.6 ORF54898 - 0.01 16.2 0.9 0.1 12.9 1.0 2.0 2 0 0 2 2 2 1 SPATIAL FeoB_associated PF12669.7 ORF47322 - 0.027 14.9 2.1 0.083 13.3 2.1 1.8 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein Vpu PF00558.19 ORF47322 - 0.061 13.1 0.0 0.061 13.1 0.0 1.9 2 0 0 2 2 2 0 Vpu protein Neur_chan_memb PF02932.16 ORF47322 - 0.076 13.1 0.0 0.14 12.2 0.0 1.3 1 1 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region ETRAMP PF09716.10 ORF47322 - 0.14 12.3 1.4 0.78 9.8 1.4 2.1 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) EphA2_TM PF14575.6 ORF47322 - 0.63 10.9 2.3 0.83 10.6 0.0 2.1 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF4834 PF16118.5 ORF47322 - 0.87 10.6 4.0 14 6.7 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Orf78 PF06024.12 ORF47322 - 0.96 9.8 4.8 2.9 8.3 1.9 2.3 2 0 0 2 2 2 0 Orf78 (ac78) DUF2207 PF09972.9 ORF47322 - 1.2 7.8 5.4 0.13 11.0 0.8 1.6 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) DUF3149 PF11346.8 ORF47322 - 2.3 7.9 6.6 2 8.1 3.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) Peptidase_S49_N PF08496.10 ORF47322 - 3.5 7.7 4.9 10 6.2 1.8 2.2 2 0 0 2 2 2 0 Peptidase family S49 N-terminal OAD_gamma PF04277.13 ORF47322 - 4.5 7.9 5.9 1.9 9.1 0.5 2.2 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain PGM_PMM_IV PF00408.20 ORF46946 - 2.1e-10 40.6 0.1 4.7e-10 39.5 0.1 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGM_PMM_III PF02880.16 ORF46946 - 0.029 14.5 0.2 0.052 13.7 0.2 1.5 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XylR_N PF06505.11 ORF46946 - 0.093 12.5 0.0 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 Activator of aromatic catabolism XisH PF08814.10 ORF46946 - 0.21 11.8 0.0 0.42 10.8 0.0 1.5 1 0 0 1 1 1 0 XisH protein TIR_2 PF13676.6 ORF46776 - 0.0022 18.6 0.0 0.0055 17.3 0.0 1.6 1 1 0 1 1 1 1 TIR domain HET PF06985.11 ORF46776 - 0.18 12.1 0.4 0.65 10.3 0.0 1.9 2 1 0 2 2 2 0 Heterokaryon incompatibility protein (HET) TIR PF01582.20 ORF46776 - 0.19 11.6 0.0 0.3 10.9 0.0 1.2 1 0 0 1 1 1 0 TIR domain TTL PF03133.15 ORF42661 - 4e-19 68.8 0.0 9.5e-09 34.8 0.0 2.1 1 1 0 2 2 2 2 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF42661 - 1.2e-08 34.6 0.0 2e-08 33.8 0.0 1.3 1 1 0 1 1 1 1 YheC/D like ATP-grasp MACPF PF01823.19 ORF42060 - 0.13 12.4 5.5 0.22 11.6 5.5 1.5 1 0 0 1 1 1 0 MAC/Perforin domain C2 PF00168.30 ORF40189 - 3.3e-19 69.1 0.0 4.8e-19 68.6 0.0 1.2 1 0 0 1 1 1 1 C2 domain SR-25 PF10500.9 ORF40189 - 0.13 11.9 9.5 0.18 11.4 9.5 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 ORF40189 - 6.2 7.1 19.5 10 6.5 19.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) ADP_ribosyl_GH PF03747.14 ORF3598 - 1.8e-20 73.9 0.3 3.1e-20 73.1 0.3 1.4 1 1 0 1 1 1 1 ADP-ribosylglycohydrolase EF-hand_5 PF13202.6 ORF33353 - 8e-08 31.4 0.0 2.1e-07 30.1 0.0 1.8 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF33353 - 1.6e-05 24.1 1.2 3.4e-05 23.1 0.0 2.3 3 0 0 3 3 3 1 EF hand EF-hand_7 PF13499.6 ORF33353 - 0.00013 22.3 4.0 0.022 15.2 1.3 1.9 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF33353 - 0.00029 20.5 0.0 0.0013 18.5 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 ORF33353 - 0.014 15.2 0.0 0.029 14.2 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain pair Ion_trans PF00520.31 ORF33353 - 0.031 13.5 1.6 0.04 13.2 1.6 1.1 1 0 0 1 1 1 0 Ion transport protein SPARC_Ca_bdg PF10591.9 ORF33353 - 0.035 14.4 0.5 0.75 10.1 0.0 2.3 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region OAD_gamma PF04277.13 ORF33353 - 0.078 13.6 0.0 0.22 12.1 0.0 1.7 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF676 PF05057.14 ORF32737 - 2.1e-22 79.7 0.1 4.2e-22 78.8 0.0 1.5 2 0 0 2 2 2 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF32737 - 5e-08 33.1 0.0 3.1e-07 30.5 0.0 2.0 1 1 0 1 1 1 1 Palmitoyl protein thioesterase DUF915 PF06028.11 ORF32737 - 1.9e-06 27.4 0.1 1.1e-05 24.9 0.1 2.0 1 1 1 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) LCAT PF02450.15 ORF32737 - 5.3e-05 22.6 0.0 7e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase PGAP1 PF07819.13 ORF32737 - 5.7e-05 22.9 0.0 9.7e-05 22.2 0.0 1.5 1 1 0 1 1 1 1 PGAP1-like protein Abhydrolase_1 PF00561.20 ORF32737 - 0.00026 20.7 0.0 0.00065 19.4 0.0 1.8 2 0 0 2 2 2 1 alpha/beta hydrolase fold DUF900 PF05990.12 ORF32737 - 0.0023 17.5 0.0 0.0076 15.8 0.0 1.7 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF900) VirJ PF06057.11 ORF32737 - 0.0051 16.7 0.1 0.015 15.2 0.0 1.8 2 0 0 2 2 2 1 Bacterial virulence protein (VirJ) Hydrolase_4 PF12146.8 ORF32737 - 0.0076 15.5 0.0 0.028 13.7 0.0 1.8 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Peptidase_S9_N PF02897.15 ORF32737 - 0.039 12.8 0.0 0.065 12.0 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase, N-terminal beta-propeller domain PE-PPE PF08237.11 ORF32737 - 0.045 13.3 0.0 0.07 12.7 0.0 1.2 1 0 0 1 1 1 0 PE-PPE domain CbiK PF06180.11 ORF32737 - 0.048 13.0 0.1 0.081 12.2 0.1 1.4 1 0 0 1 1 1 0 Cobalt chelatase (CbiK) Abhydrolase_6 PF12697.7 ORF32737 - 0.067 13.8 0.0 0.081 13.5 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Cutinase PF01083.22 ORF32737 - 0.13 12.2 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 Cutinase DUF4200 PF13863.6 ORF28975 - 1e-19 71.0 24.7 1e-19 71.0 24.7 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4200) Lectin_N PF03954.14 ORF28975 - 1.8 8.3 17.4 0.2 11.4 2.6 3.4 3 1 1 4 4 4 0 Hepatic lectin, N-terminal domain DUF4694 PF15765.5 ORF28524 - 0.009 16.0 1.2 0.009 16.0 1.2 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4694) Pex2_Pex12 PF04757.14 ORF27999 - 2.8e-13 50.0 13.4 4e-13 49.5 13.4 1.2 1 0 0 1 1 1 1 Pex2 / Pex12 amino terminal region zf-C3HC4_2 PF13923.6 ORF27999 - 1.3e-06 28.1 5.2 3.8e-06 26.6 5.2 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF27999 - 2.9e-05 24.3 7.8 9.2e-05 22.7 7.8 1.9 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF27999 - 0.00042 20.1 8.7 0.0014 18.5 8.7 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF27999 - 0.00055 19.7 8.4 0.0012 18.7 8.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF27999 - 0.0036 17.4 10.1 0.011 15.9 10.1 1.9 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF27999 - 0.0077 16.2 7.6 0.031 14.3 7.6 2.1 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_6 PF14835.6 ORF27999 - 0.1 12.5 3.5 0.21 11.5 3.5 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-rbx1 PF12678.7 ORF27999 - 0.17 12.2 7.7 3.1 8.2 7.7 2.5 1 1 0 1 1 1 0 RING-H2 zinc finger domain zf-Nse PF11789.8 ORF27999 - 0.35 10.7 6.2 0.97 9.3 6.2 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_5 PF14634.6 ORF27999 - 2 8.5 9.6 6 6.9 9.6 1.8 1 0 0 1 1 1 0 zinc-RING finger domain DUF4200 PF13863.6 ORF27859 - 1e-19 71.0 24.7 1e-19 71.0 24.7 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4200) Lectin_N PF03954.14 ORF27859 - 1.8 8.3 17.4 0.2 11.4 2.6 3.4 3 1 1 4 4 4 0 Hepatic lectin, N-terminal domain Alanine_zipper PF11839.8 ORF23873 - 0.014 15.8 44.2 0.17 12.2 22.8 2.9 1 1 2 3 3 3 0 Alanine-zipper, major outer membrane lipoprotein ACI44 PF15270.6 ORF23873 - 0.021 15.0 0.1 0.044 14.0 0.1 1.4 1 0 0 1 1 1 0 Metallo-carboxypeptidase inhibitor HisKA_3 PF07730.13 ORF23873 - 0.66 10.5 20.2 3.6 8.2 4.4 3.6 1 1 2 3 3 3 0 Histidine kinase T3SSipB PF16535.5 ORF23873 - 0.67 10.4 21.0 1.8 9.0 21.0 1.7 1 1 0 1 1 1 0 Type III cell invasion protein SipB DUF3584 PF12128.8 ORF23873 - 0.88 7.0 14.3 1.4 6.4 14.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF4051 PF13260.6 ORF23873 - 1.3 8.8 4.6 0.82 9.5 1.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) Pkinase PF00069.25 ORF22744 - 4.8e-48 163.8 0.6 7.3e-48 163.2 0.6 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22744 - 8.1e-27 94.1 0.2 8e-26 90.9 0.1 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase RIO1 PF01163.22 ORF22744 - 8.7e-05 22.2 0.1 0.00027 20.6 0.0 1.8 2 1 0 2 2 2 1 RIO1 family Pox_ser-thr_kin PF05445.11 ORF22744 - 0.0074 15.3 0.1 0.012 14.7 0.1 1.3 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase APH PF01636.23 ORF22744 - 0.066 13.1 0.0 0.19 11.6 0.0 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family YrbL-PhoP_reg PF10707.9 ORF22744 - 0.073 12.6 0.3 1 8.8 0.0 2.3 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL C2 PF00168.30 ORF21957 - 3.3e-19 69.1 0.0 4.8e-19 68.6 0.0 1.2 1 0 0 1 1 1 1 C2 domain SR-25 PF10500.9 ORF21957 - 0.13 11.9 9.5 0.18 11.4 9.5 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 ORF21957 - 6.2 7.1 19.5 10 6.5 19.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) NAD_binding_2 PF03446.15 ORF19256 - 5e-46 156.7 0.2 6.4e-46 156.4 0.2 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF19256 - 8.2e-31 106.8 0.0 1.4e-30 106.0 0.0 1.4 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 ORF19256 - 2.3e-06 28.1 0.0 4.7e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 ORF19256 - 1.2e-05 24.7 0.0 1.9e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 ORF19256 - 0.00011 22.1 0.0 0.00039 20.4 0.0 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 ORF19256 - 0.00049 19.7 0.0 0.013 15.1 0.0 2.2 1 1 1 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 ORF19256 - 0.002 18.4 0.0 0.0038 17.5 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain Shikimate_DH PF01488.20 ORF19256 - 0.011 15.8 0.0 0.017 15.2 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 ORF19256 - 0.015 14.9 0.0 0.023 14.3 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_C PF01262.21 ORF19256 - 0.035 13.4 0.0 0.055 12.7 0.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain GFO_IDH_MocA PF01408.22 ORF19256 - 0.14 13.0 0.0 0.23 12.3 0.0 1.3 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold CK_II_beta PF01214.18 ORF16071 - 1e-61 207.9 0.2 1.3e-61 207.5 0.2 1.1 1 0 0 1 1 1 1 Casein kinase II regulatory subunit zinc_ribbon_5 PF13719.6 ORF16071 - 0.053 13.3 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 zinc-ribbon domain PLAC8 PF04749.17 ORF150641 - 7.4e-07 30.1 12.1 1.9e-06 28.8 12.1 1.7 1 0 0 1 1 1 1 PLAC8 family Sushi PF00084.20 ORF150641 - 0.0014 19.1 0.4 0.0031 18.1 0.4 1.6 1 0 0 1 1 1 1 Sushi repeat (SCR repeat) DUF676 PF05057.14 ORF142962 - 2.1e-22 79.7 0.1 4.2e-22 78.8 0.0 1.5 2 0 0 2 2 2 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 ORF142962 - 5e-08 33.1 0.0 3.1e-07 30.5 0.0 2.0 1 1 0 1 1 1 1 Palmitoyl protein thioesterase DUF915 PF06028.11 ORF142962 - 1.9e-06 27.4 0.1 1.1e-05 24.9 0.1 2.0 1 1 1 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) LCAT PF02450.15 ORF142962 - 5.3e-05 22.6 0.0 7e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase PGAP1 PF07819.13 ORF142962 - 5.7e-05 22.9 0.0 9.7e-05 22.2 0.0 1.5 1 1 0 1 1 1 1 PGAP1-like protein Abhydrolase_1 PF00561.20 ORF142962 - 0.00026 20.7 0.0 0.00065 19.4 0.0 1.8 2 0 0 2 2 2 1 alpha/beta hydrolase fold DUF900 PF05990.12 ORF142962 - 0.0023 17.5 0.0 0.0076 15.8 0.0 1.7 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF900) VirJ PF06057.11 ORF142962 - 0.0051 16.7 0.1 0.015 15.2 0.0 1.8 2 0 0 2 2 2 1 Bacterial virulence protein (VirJ) Hydrolase_4 PF12146.8 ORF142962 - 0.0076 15.5 0.0 0.028 13.7 0.0 1.8 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Peptidase_S9_N PF02897.15 ORF142962 - 0.039 12.8 0.0 0.065 12.0 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase, N-terminal beta-propeller domain PE-PPE PF08237.11 ORF142962 - 0.045 13.3 0.0 0.07 12.7 0.0 1.2 1 0 0 1 1 1 0 PE-PPE domain CbiK PF06180.11 ORF142962 - 0.048 13.0 0.1 0.081 12.2 0.1 1.4 1 0 0 1 1 1 0 Cobalt chelatase (CbiK) Abhydrolase_6 PF12697.7 ORF142962 - 0.067 13.8 0.0 0.081 13.5 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Cutinase PF01083.22 ORF142962 - 0.13 12.2 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 Cutinase ATP13 PF12921.7 ORF141408 - 0.0098 15.7 0.1 0.024 14.5 0.1 1.7 1 0 0 1 1 1 1 Mitochondrial ATPase expression Pkinase PF00069.25 ORF141 - 3.5e-69 233.1 0.0 4e-69 232.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF141 - 1.2e-32 113.2 0.0 1.5e-32 112.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF141 - 0.00016 21.1 0.0 0.00026 20.4 0.0 1.3 1 0 0 1 1 1 1 Kinase-like RTT107_BRCT_6 PF16771.5 ORF141 - 0.13 12.4 0.2 2.8 8.1 0.0 2.2 2 0 0 2 2 2 0 Regulator of Ty1 transposition protein 107 BRCT domain BTB PF00651.31 ORF135193 - 0.0019 18.4 0.0 0.0035 17.6 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain CobT PF06213.12 ORF135193 - 0.01 15.2 9.8 0.01 15.2 9.8 2.0 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT DUF2151 PF10221.9 ORF135193 - 1.2 7.6 8.2 2.1 6.9 8.2 1.3 1 0 0 1 1 1 0 Cell cycle and development regulator RR_TM4-6 PF06459.12 ORF135193 - 2.1 8.1 23.5 0.06 13.2 14.4 2.1 2 0 0 2 2 2 0 Ryanodine Receptor TM 4-6 GAGA_bind PF06217.12 ORF135193 - 2.5 8.3 12.8 0.24 11.7 7.8 1.8 2 0 0 2 2 2 0 GAGA binding protein-like family CDC45 PF02724.14 ORF135193 - 2.7 6.2 11.2 4.3 5.5 11.2 1.3 1 0 0 1 1 1 0 CDC45-like protein SRP-alpha_N PF04086.13 ORF135193 - 2.8 7.8 22.8 3.6 7.4 0.6 2.1 2 0 0 2 2 2 0 Signal recognition particle, alpha subunit, N-terminal Raftlin PF15250.6 ORF135193 - 8.1 5.1 12.9 22 3.6 0.0 2.0 2 0 0 2 2 2 0 Raftlin Asp PF00026.23 ORF135102 - 1.5e-16 60.7 4.1 2e-16 60.3 4.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF135102 - 7.3e-11 42.6 0.2 1e-10 42.2 0.2 1.2 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal TFIIS_M PF07500.14 ORF126538 - 2.9e-13 50.3 0.1 5.5e-13 49.4 0.1 1.4 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain AF-4 PF05110.13 ORF126538 - 0.0031 15.7 10.1 0.0049 15.1 10.1 1.2 1 0 0 1 1 1 1 AF-4 proto-oncoprotein IMUP PF15761.5 ORF126538 - 0.027 15.2 5.1 0.027 15.2 5.1 2.3 3 0 0 3 3 3 0 Immortalisation up-regulated protein MCC-bdg_PDZ PF10506.9 ORF126538 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF1116 PF06545.11 ORF126538 - 0.13 11.8 0.1 0.2 11.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1116) Occludin_ELL PF07303.13 ORF123682 - 0.18 12.6 4.5 2.5 8.9 0.3 2.4 2 0 0 2 2 2 0 Occludin homology domain zf-RING_2 PF13639.6 ORF121908 - 4e-11 43.1 5.4 1.1e-10 41.7 5.4 1.8 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF121908 - 2.4e-08 34.1 6.1 5.5e-08 33.0 6.1 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF121908 - 5e-08 32.7 5.1 1.2e-07 31.5 5.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF121908 - 5.5e-07 29.2 1.9 1.3e-06 28.0 1.9 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF121908 - 3e-05 23.9 4.1 7.2e-05 22.7 4.1 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF121908 - 7.2e-05 22.6 5.0 7.2e-05 22.6 5.0 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF121908 - 0.00014 21.7 4.9 0.00028 20.7 4.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF121908 - 0.00061 19.8 2.3 0.0015 18.5 2.3 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF121908 - 0.00065 19.7 1.7 0.0012 18.8 1.7 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF121908 - 0.0062 16.4 4.4 0.013 15.3 4.4 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 ECM11 PF15463.6 ORF121908 - 0.034 14.7 1.9 0.072 13.7 1.9 1.5 1 0 0 1 1 1 0 Extracellular mutant protein 11 RINGv PF12906.7 ORF121908 - 0.055 13.6 5.7 0.14 12.3 5.7 1.7 1 0 0 1 1 1 0 RING-variant domain Baculo_RING PF05883.11 ORF121908 - 0.071 13.1 2.1 0.15 12.1 2.1 1.6 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain DUF883 PF05957.13 ORF121908 - 0.078 13.6 1.3 0.13 12.9 1.3 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Tmpp129 PF10272.9 ORF121908 - 0.09 12.1 6.7 0.13 11.6 1.3 2.3 2 0 0 2 2 2 0 Putative transmembrane protein precursor zf-RING_4 PF14570.6 ORF121908 - 0.091 12.6 3.6 0.2 11.4 3.6 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3H2C3 PF17122.5 ORF121908 - 0.1 12.7 3.8 0.29 11.2 3.8 1.8 1 0 0 1 1 1 0 Zinc-finger Zn_ribbon_17 PF17120.5 ORF121908 - 0.35 10.5 5.6 0.77 9.4 5.6 1.6 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Mito_carr PF00153.27 ORF120224 - 2.1e-69 229.5 1.4 5.9e-22 77.4 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Serine_protease PF18405.1 ORF120224 - 0.0056 15.9 0.2 0.073 12.2 0.0 2.5 3 0 0 3 3 3 1 Gammaproteobacterial serine protease PrcB_C PF14343.6 ORF120224 - 0.057 13.6 0.0 13 6.0 0.0 3.2 4 0 0 4 4 4 0 PrcB C-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks56.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks56.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks56.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks56.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:25 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- CDC50 PF03381.15 ORF118835 - 6.6e-51 173.5 2.2 6.6e-51 173.5 2.2 1.4 2 0 0 2 2 2 1 LEM3 (ligand-effect modulator 3) family / CDC50 family TIR_2 PF13676.6 ORF117879 - 0.0022 18.6 0.0 0.0055 17.3 0.0 1.6 1 1 0 1 1 1 1 TIR domain HET PF06985.11 ORF117879 - 0.18 12.1 0.4 0.65 10.3 0.0 1.9 2 1 0 2 2 2 0 Heterokaryon incompatibility protein (HET) TIR PF01582.20 ORF117879 - 0.19 11.6 0.0 0.3 10.9 0.0 1.2 1 0 0 1 1 1 0 TIR domain Myb_DNA-bind_6 PF13921.6 ORF116043 - 6.2e-10 39.2 5.0 0.00033 20.8 0.2 2.6 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 ORF116043 - 1.8e-08 34.5 1.7 0.0043 17.2 0.3 2.8 2 0 0 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 ORF116043 - 0.016 15.4 3.4 0.054 13.7 0.3 2.9 2 1 1 3 3 3 0 SANT/Myb-like domain of DAMP1 SSI PF00720.17 ORF116043 - 0.11 12.5 0.2 0.21 11.6 0.2 1.4 1 0 0 1 1 1 0 Subtilisin inhibitor-like Cdh1_DBD_1 PF18196.1 ORF116043 - 2.1 8.7 9.1 0.28 11.5 2.1 2.4 2 1 1 3 3 3 0 Chromodomain helicase DNA-binding domain 1 Ank_2 PF12796.7 ORF104251 - 2.4e-15 56.9 0.6 1.2e-07 32.3 0.0 3.7 3 1 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF104251 - 3.4e-15 56.2 0.5 0.0083 16.7 0.0 5.5 3 2 3 6 6 6 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF104251 - 6.2e-14 51.7 1.8 0.0093 16.4 0.0 5.6 5 1 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF104251 - 2.7e-12 45.7 0.1 0.095 13.3 0.0 5.9 6 0 0 6 6 6 3 Ankyrin repeat Ank_5 PF13857.6 ORF104251 - 4.2e-06 26.9 1.1 0.25 11.7 0.0 5.0 5 0 0 5 5 5 2 Ankyrin repeats (many copies) Myb_DNA-bind_6 PF13921.6 ORF103878 - 6.2e-10 39.2 5.0 0.00033 20.8 0.2 2.6 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 ORF103878 - 1.8e-08 34.5 1.7 0.0043 17.2 0.3 2.8 2 0 0 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 ORF103878 - 0.016 15.4 3.4 0.054 13.7 0.3 2.9 2 1 1 3 3 3 0 SANT/Myb-like domain of DAMP1 SSI PF00720.17 ORF103878 - 0.11 12.5 0.2 0.21 11.6 0.2 1.4 1 0 0 1 1 1 0 Subtilisin inhibitor-like Cdh1_DBD_1 PF18196.1 ORF103878 - 2.1 8.7 9.1 0.28 11.5 2.1 2.4 2 1 1 3 3 3 0 Chromodomain helicase DNA-binding domain 1 Plasmodium_HRP PF05403.11 NODE_20977_length_951_cov_722.493450_g12817_i1reverse_frame_2 - 2.8e-07 30.6 7.8 6.3e-07 29.4 7.8 1.6 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) HBS1_N PF08938.10 NODE_20977_length_951_cov_722.493450_g12817_i1reverse_frame_2 - 0.034 14.5 0.0 0.034 14.5 0.0 2.6 2 1 0 2 2 2 0 HBS1 N-terminus EELM2 PF15863.5 NODE_20977_length_951_cov_722.493450_g12817_i1reverse_frame_2 - 0.077 13.1 0.0 0.077 13.1 0.0 2.9 2 1 2 4 4 4 0 Extended EGL-27 and MTA1 homology domain T2SSppdC PF12528.8 NODE_20977_length_951_cov_722.493450_g12817_i1reverse_frame_2 - 0.14 13.0 1.7 0.23 12.2 0.8 2.0 1 1 0 1 1 1 0 Type II secretion prepilin peptidase dependent protein C Pkinase PF00069.25 ORF98796 - 7.6e-61 205.8 0.4 9.2e-61 205.5 0.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF98796 - 2.2e-29 102.5 0.1 3.2e-29 102.0 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF98796 - 8e-07 28.7 0.0 1.8e-05 24.2 0.0 2.2 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF98796 - 0.00029 20.3 0.0 0.00044 19.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF98796 - 0.00033 20.4 0.1 0.035 13.7 0.0 2.2 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF98796 - 0.0034 16.2 0.2 0.1 11.4 0.0 2.1 2 0 0 2 2 2 1 Fungal protein kinase Phi29_Phage_SSB PF17427.2 ORF98796 - 0.083 13.1 0.2 0.14 12.3 0.2 1.3 1 0 0 1 1 1 0 Phage Single-stranded DNA-binding protein APH PF01636.23 ORF98796 - 0.19 11.6 0.0 1.1 9.1 0.0 1.9 1 1 0 2 2 2 0 Phosphotransferase enzyme family TPR_1 PF00515.28 ORF95781 - 2.4e-05 24.0 0.2 6.2e-05 22.6 0.2 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF95781 - 5.1e-05 23.3 0.4 0.0031 17.5 0.1 2.4 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat TPR_14 PF13428.6 ORF95781 - 0.00032 21.3 2.7 0.028 15.2 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF95781 - 0.00052 19.9 0.3 0.0037 17.3 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF95781 - 0.0027 17.8 0.1 0.0066 16.6 0.1 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF95781 - 0.0082 15.8 0.0 0.016 14.9 0.0 1.5 1 0 0 1 1 1 1 TPR repeat TPR_19 PF14559.6 ORF95781 - 0.012 16.1 4.4 0.05 14.1 0.4 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF95781 - 0.061 14.0 2.0 0.33 11.6 0.0 3.1 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF95781 - 0.2 12.1 0.7 17 6.1 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat CENP-K PF11802.8 ORF9245 - 0.039 13.5 5.9 0.067 12.8 5.9 1.3 1 0 0 1 1 1 0 Centromere-associated protein K SRPRB PF09439.10 ORF9245 - 0.071 12.5 8.2 0.78 9.1 0.7 2.5 3 0 0 3 3 3 0 Signal recognition particle receptor beta subunit Baculo_PEP_C PF04513.12 ORF9245 - 0.073 13.1 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Bap31_Bap29_C PF18035.1 ORF9245 - 2.7 8.1 8.3 0.4 10.7 1.3 2.5 2 1 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain EF-hand_1 PF00036.32 ORF90893 - 6.2e-16 56.7 9.2 4.5e-06 25.8 1.1 4.9 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF90893 - 7e-15 53.6 9.6 0.0003 20.5 0.7 5.1 3 2 1 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 ORF90893 - 4.8e-14 52.6 9.9 4.3e-11 43.1 2.7 3.9 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF90893 - 3.3e-09 36.5 8.2 0.00036 20.3 0.1 4.2 3 2 2 5 5 5 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF90893 - 2.5e-08 33.1 2.2 0.00016 21.0 0.0 3.2 3 0 0 3 3 3 2 EF hand EF-hand_4 PF12763.7 ORF90893 - 0.0028 17.6 10.6 0.085 12.8 0.8 3.7 1 1 3 4 4 4 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF90893 - 0.0048 17.2 0.6 14 6.1 0.0 3.5 3 1 0 3 3 3 2 EF-hand domain adh_short PF00106.25 ORF88322 - 1.7e-28 99.4 0.0 2.5e-28 98.9 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF88322 - 7.6e-27 94.4 0.0 1.3e-26 93.7 0.0 1.3 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF88322 - 0.0011 18.9 0.1 0.0016 18.4 0.1 1.2 1 0 0 1 1 1 1 KR domain CSD PF00313.22 ORF82844 - 3.7e-14 52.3 0.0 5.9e-14 51.7 0.0 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF82844 - 0.00048 19.8 0.1 0.0008 19.0 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease B OB domain DUF179 PF02622.15 ORF82009 - 3.9e-19 69.2 0.0 8.2e-19 68.1 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized ACR, COG1678 Antimicrobial12 PF08107.11 ORF82009 - 0.054 13.2 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 Pleurocidin family WD40 PF00400.32 ORF72809 - 4.4e-13 49.5 3.1 0.00024 21.8 0.0 4.7 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF72809 - 5.8e-09 36.1 0.0 0.017 15.4 0.0 4.2 2 1 2 4 4 4 4 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF72809 - 0.0012 18.2 3.1 0.21 10.9 2.0 2.5 1 1 2 3 3 3 3 WD40-like domain Ge1_WD40 PF16529.5 ORF72809 - 0.011 14.7 0.2 1.1 8.2 0.0 2.3 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Methyltransf_12 PF08242.12 ORF6895 - 2.9 8.7 5.7 41 5.0 0.1 3.6 2 1 1 3 3 3 0 Methyltransferase domain DUF2475 PF10629.9 ORF68207 - 7.2e-09 35.7 5.7 0.0013 18.9 0.1 3.3 3 0 0 3 3 3 2 Protein of unknown function (DUF2475) DUF4115 PF13464.6 ORF68207 - 0.015 15.5 0.3 0.03 14.5 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4115) DUF4612 PF15389.6 ORF68207 - 1.8 9.6 6.3 1.2 10.3 3.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4612) Aa_trans PF01490.18 ORF65995 - 2e-13 49.9 9.4 3.6e-13 49.0 9.4 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein ETRAMP PF09716.10 ORF65995 - 0.0091 16.0 0.2 0.04 14.0 0.0 2.2 2 0 0 2 2 2 1 Malarial early transcribed membrane protein (ETRAMP) PH_8 PF15409.6 ORF63511 - 1.7e-05 25.0 0.0 6.2e-05 23.2 0.0 2.0 1 0 0 1 1 1 1 Pleckstrin homology domain ECH_1 PF00378.20 ORF60586 - 2.2e-36 125.5 0.3 1.3e-23 83.6 0.2 2.0 2 0 0 2 2 2 2 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF60586 - 1.1e-24 87.5 0.2 2.7e-24 86.3 0.2 1.6 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF1365 PF07103.11 ORF57105 - 4.9e-35 121.3 0.0 1.5e-33 116.5 0.0 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1365) GFO_IDH_MocA PF01408.22 ORF56036 - 2.4e-14 54.2 0.0 3.8e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 ORF56036 - 2.2e-07 30.9 0.0 4.2e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain LAL_C2 PF18603.1 ORF56036 - 0.043 14.0 0.0 0.13 12.4 0.0 1.8 1 0 0 1 1 1 0 L-amino acid ligase C-terminal domain 2 PP2C PF00481.21 ORF50066 - 7.7e-08 32.3 0.1 1.1e-07 31.8 0.1 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF50066 - 0.11 12.4 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) TAL_FSA PF00923.19 ORF44618 - 6.9e-102 340.6 0.0 7.9e-102 340.5 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase P5CR_dimer PF14748.6 ORF33291 - 2.4e-38 130.5 1.3 4.4e-38 129.7 1.3 1.4 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 ORF33291 - 1.1e-24 86.8 0.5 2.3e-24 85.8 0.5 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 ORF33291 - 2.8e-09 37.3 0.1 6.1e-09 36.2 0.1 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF33291 - 0.00029 21.1 0.1 0.00051 20.3 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 ORF33291 - 0.0036 17.4 0.1 0.0075 16.3 0.0 1.6 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GFO_IDH_MocA PF01408.22 ORF33291 - 0.0052 17.6 0.0 0.011 16.5 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold OCD_Mu_crystall PF02423.15 ORF33291 - 0.017 14.1 0.0 0.03 13.3 0.0 1.3 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family PDH PF02153.17 ORF33291 - 0.025 13.6 0.1 0.056 12.4 0.1 1.6 1 0 0 1 1 1 0 Prephenate dehydrogenase 2-Hacid_dh_C PF02826.19 ORF33291 - 0.044 13.1 0.1 0.098 12.0 0.1 1.7 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_4 PF01565.23 ORF33291 - 0.048 13.4 3.9 0.59 9.9 0.0 3.1 4 1 0 4 4 3 0 FAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF33291 - 0.13 12.2 3.8 2.3 8.2 3.8 2.3 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 ORF33291 - 0.16 11.6 4.0 1.3 8.7 4.0 2.1 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 ORF33291 - 3.4 7.5 7.0 1 9.2 0.2 2.5 2 1 1 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Acetyltransf_1 PF00583.25 ORF30457 - 2.9e-11 43.6 0.1 4.7e-11 42.9 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 ORF30457 - 3.7e-08 33.7 0.2 6.7e-08 32.8 0.2 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 ORF30457 - 5.1e-07 29.7 0.2 8.7e-07 28.9 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF30457 - 0.00092 19.3 0.0 0.0026 17.9 0.0 1.7 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase FR47 PF08445.10 ORF30457 - 0.0027 17.6 0.0 0.0064 16.4 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_17 PF17668.1 ORF30457 - 0.012 16.5 0.1 0.03 15.1 0.1 1.7 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 ORF30457 - 0.031 14.2 0.0 0.17 11.9 0.0 2.1 2 0 0 2 2 2 0 ESCO1/2 acetyl-transferase Acetyltransf_4 PF13420.7 ORF30457 - 0.076 13.1 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DnaJ_C PF01556.18 ORF28728 - 1.3e-26 93.4 0.6 2e-26 92.9 0.6 1.3 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 ORF28728 - 1.7e-15 56.9 1.6 1.7e-15 56.9 1.6 1.7 2 0 0 2 2 2 1 DnaJ domain WD40 PF00400.32 ORF28330 - 7e-12 45.7 11.6 2.1e-05 25.2 0.4 4.4 4 0 0 4 4 4 3 WD domain, G-beta repeat DUF2024 PF09630.10 ORF28330 - 0.1 12.5 1.3 0.73 9.7 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF2024) DUF4370 PF14290.6 ORF26931 - 0.015 15.1 1.7 0.049 13.5 0.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4370) RIIa PF02197.17 ORF26931 - 0.024 14.3 0.0 0.064 12.9 0.0 1.8 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit Selenoprotein_S PF06936.11 ORF26931 - 0.032 14.1 6.0 0.053 13.3 6.0 1.4 1 0 0 1 1 1 0 Selenoprotein S (SelS) DUF4611 PF15387.6 ORF26931 - 0.34 11.2 9.8 2.9 8.2 9.8 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4611) SBP_bac_3 PF00497.20 ORF25253 - 2.1e-20 73.2 0.0 2.4e-20 72.9 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 PH_8 PF15409.6 ORF150429 - 1.7e-05 25.0 0.0 6.2e-05 23.2 0.0 2.0 1 0 0 1 1 1 1 Pleckstrin homology domain Lipase_3 PF01764.25 ORF146060 - 1.9e-29 102.4 0.0 3.1e-29 101.7 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF146060 - 0.0044 17.7 0.0 0.0058 17.3 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF146060 - 0.016 14.5 0.0 0.03 13.6 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF146060 - 0.038 13.5 0.2 0.075 12.6 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2974) MSA-2c PF12238.8 ORF146060 - 0.078 13.0 0.4 0.12 12.4 0.4 1.4 1 0 0 1 1 1 0 Merozoite surface antigen 2c AAA_25 PF13481.6 ORF117060 - 0.35 10.4 0.8 17 4.9 0.1 2.2 2 0 0 2 2 2 0 AAA domain DUF724 PF05266.14 ORF111772 - 3.1e-05 23.9 19.0 0.0033 17.3 1.7 2.8 1 1 0 2 2 2 2 Protein of unknown function (DUF724) MscS_porin PF12795.7 ORF111772 - 3.2e-05 23.6 5.2 3.2e-05 23.6 5.2 2.2 1 1 2 3 3 3 1 Mechanosensitive ion channel porin domain ATG16 PF08614.11 ORF111772 - 3.3e-05 24.2 18.4 0.0032 17.7 7.3 2.4 1 1 1 2 2 2 2 Autophagy protein 16 (ATG16) DUF812 PF05667.11 ORF111772 - 0.00035 19.6 20.4 0.0016 17.4 5.6 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF812) BRE1 PF08647.11 ORF111772 - 0.0011 18.9 22.7 0.12 12.4 0.1 4.1 2 1 2 4 4 4 2 BRE1 E3 ubiquitin ligase HAP1_N PF04849.13 ORF111772 - 0.0015 17.8 19.1 0.018 14.3 1.6 3.6 1 1 2 3 3 3 1 HAP1 N-terminal conserved region Filament PF00038.21 ORF111772 - 0.0019 17.9 24.3 0.034 13.7 4.4 2.6 1 1 1 2 2 2 2 Intermediate filament protein Laminin_I PF06008.14 ORF111772 - 0.0031 17.2 4.2 0.0031 17.2 4.2 2.7 1 1 1 2 2 2 1 Laminin Domain I Fez1 PF06818.15 ORF111772 - 0.0039 17.7 17.9 0.013 16.0 9.9 2.6 1 1 1 2 2 2 1 Fez1 GAS PF13851.6 ORF111772 - 0.0082 15.5 3.7 0.0082 15.5 3.7 2.8 1 1 2 3 3 3 1 Growth-arrest specific micro-tubule binding AAA_13 PF13166.6 ORF111772 - 0.011 14.5 19.8 0.14 10.7 19.7 2.0 1 1 0 1 1 1 0 AAA domain DUF1664 PF07889.12 ORF111772 - 0.012 15.7 17.3 0.1 12.6 0.9 3.9 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) DUF641 PF04859.12 ORF111772 - 0.02 15.2 16.0 0.64 10.4 3.4 3.4 2 2 1 3 3 3 0 Plant protein of unknown function (DUF641) CENP-F_leu_zip PF10473.9 ORF111772 - 0.022 14.8 23.1 1.1 9.3 0.5 3.5 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BicD PF09730.9 ORF111772 - 0.022 13.2 17.9 0.042 12.3 15.5 2.0 1 1 1 2 2 2 0 Microtubule-associated protein Bicaudal-D Spc7 PF08317.11 ORF111772 - 0.025 13.5 24.2 0.058 12.3 8.6 2.6 1 1 1 2 2 2 0 Spc7 kinetochore protein CALCOCO1 PF07888.11 ORF111772 - 0.03 13.2 21.5 0.077 11.9 14.0 2.3 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like DUF4763 PF15960.5 ORF111772 - 0.038 13.3 6.9 0.23 10.7 0.2 3.3 2 2 0 3 3 3 0 Domain of unknown function (DUF4763) DUF4407 PF14362.6 ORF111772 - 0.046 13.1 18.3 2.3 7.5 7.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF4686 PF15742.5 ORF111772 - 0.052 12.7 23.2 0.018 14.2 5.5 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4686) MIP-T3_C PF17749.1 ORF111772 - 0.057 13.4 19.3 0.9 9.5 0.9 3.5 1 1 2 3 3 3 0 Microtubule-binding protein MIP-T3 C-terminal region ADIP PF11559.8 ORF111772 - 0.059 13.5 20.5 1.9 8.5 4.6 3.8 1 1 3 4 4 4 0 Afadin- and alpha -actinin-Binding EzrA PF06160.12 ORF111772 - 0.096 10.8 24.0 0.067 11.3 4.6 2.5 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA TMPIT PF07851.13 ORF111772 - 0.14 11.3 13.6 0.74 9.0 3.6 2.3 2 0 0 2 2 2 0 TMPIT-like protein FPP PF05911.11 ORF111772 - 0.15 10.2 17.1 0.047 11.9 2.9 2.1 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil TPR_MLP1_2 PF07926.12 ORF111772 - 0.16 12.1 16.8 0.092 12.8 3.7 3.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Rab5-bind PF09311.11 ORF111772 - 0.17 11.2 18.4 0.39 10.1 5.2 2.6 1 1 0 2 2 2 0 Rabaptin-like protein DUF5082 PF16888.5 ORF111772 - 0.18 12.1 25.3 1.2 9.5 12.1 3.8 1 1 0 2 2 2 0 Domain of unknown function (DUF5082) Lebercilin PF15619.6 ORF111772 - 0.23 11.1 19.6 0.018 14.7 5.6 2.8 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Atg14 PF10186.9 ORF111772 - 0.24 10.5 22.3 0.77 8.8 2.0 3.2 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 NPV_P10 PF05531.12 ORF111772 - 0.25 11.8 12.6 1 9.9 2.0 4.2 1 1 4 5 5 5 0 Nucleopolyhedrovirus P10 protein DUF4472 PF14739.6 ORF111772 - 0.28 12.0 17.2 0.98 10.2 4.2 3.6 1 1 3 4 4 4 0 Domain of unknown function (DUF4472) KxDL PF10241.9 ORF111772 - 0.3 11.4 0.2 0.3 11.4 0.2 3.6 2 2 1 3 3 3 0 Uncharacterized conserved protein Fib_alpha PF08702.10 ORF111772 - 0.44 10.7 20.8 0.097 12.9 2.9 3.6 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family Laminin_II PF06009.12 ORF111772 - 0.66 10.0 16.3 0.18 11.8 1.6 3.3 1 1 2 3 3 3 0 Laminin Domain II YabA PF06156.13 ORF111772 - 0.71 10.5 13.8 5.9 7.6 1.7 3.9 1 1 1 3 3 3 0 Initiation control protein YabA YscO PF07321.12 ORF111772 - 0.73 9.8 19.1 0.36 10.8 2.1 2.8 1 1 2 3 3 3 0 Type III secretion protein YscO DUF4200 PF13863.6 ORF111772 - 0.76 10.2 27.0 4.7 7.6 5.9 3.8 2 2 0 2 2 2 0 Domain of unknown function (DUF4200) CENP-H PF05837.12 ORF111772 - 0.86 10.0 16.1 0.34 11.3 1.7 3.1 1 1 2 3 3 3 0 Centromere protein H (CENP-H) DivIC PF04977.15 ORF111772 - 1.1 9.1 26.5 1.5 8.6 0.1 5.7 2 2 4 6 6 6 0 Septum formation initiator FlaC_arch PF05377.11 ORF111772 - 1.5 9.2 16.0 2 8.9 0.7 5.2 3 2 2 5 5 5 0 Flagella accessory protein C (FlaC) SlyX PF04102.12 ORF111772 - 1.6 9.4 22.3 15 6.3 0.3 5.6 2 2 2 4 4 4 0 SlyX LMBR1 PF04791.16 ORF111772 - 2.3 7.0 9.2 3.2 6.6 9.2 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein HIP1_clath_bdg PF16515.5 ORF111772 - 2.5 8.7 17.7 1.1 10.0 1.5 3.6 2 2 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 APG6_N PF17675.1 ORF111772 - 2.6 8.6 23.2 1.8e+04 -5.5 23.2 2.9 1 1 0 1 1 0 0 Apg6 coiled-coil region Tropomyosin PF00261.20 ORF111772 - 3.3 7.0 24.7 7.3 5.9 24.7 1.8 1 1 0 1 1 1 0 Tropomyosin DUF745 PF05335.13 ORF111772 - 3.8 7.2 9.2 12 5.5 0.4 2.9 1 1 1 3 3 3 0 Protein of unknown function (DUF745) DUF4140 PF13600.6 ORF111772 - 3.9 8.0 17.6 34 4.9 3.5 4.9 1 1 3 4 4 4 0 N-terminal domain of unknown function (DUF4140) BST2 PF16716.5 ORF111772 - 4 8.1 13.8 1.9 9.1 1.7 3.4 1 1 3 4 4 4 0 Bone marrow stromal antigen 2 FAM76 PF16046.5 ORF111772 - 4.3 6.6 17.3 5.8 6.2 8.7 2.8 1 1 1 2 2 2 0 FAM76 protein DUF3573 PF12097.8 ORF111772 - 4.7 5.9 7.2 12 4.6 0.4 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3573) DUF2968 PF11180.8 ORF111772 - 6.1 6.4 16.6 5.6 6.6 1.6 3.8 1 1 2 4 4 4 0 Protein of unknown function (DUF2968) ZapB PF06005.12 ORF111772 - 6.4 7.3 19.4 0.63 10.5 3.5 4.0 2 1 1 3 3 2 0 Cell division protein ZapB ISG65-75 PF11727.8 ORF111772 - 8.6 5.5 12.6 0.14 11.4 2.6 2.2 2 0 0 2 2 2 0 Invariant surface glycoprotein AA_kinase PF00696.28 ORF105313 - 1.1e-25 90.7 0.4 2.3e-25 89.6 0.4 1.5 1 1 0 1 1 1 1 Amino acid kinase family T2SSE PF00437.20 ORF102555 - 1e-61 208.4 4.0 5e-61 206.2 1.4 2.0 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_23 PF13476.6 ORF102555 - 2e-06 28.4 0.0 3.2e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain Glyco_trans_4_4 PF13579.6 ORF102555 - 8.8e-06 26.2 0.3 1.5e-05 25.5 0.0 1.5 2 0 0 2 2 1 1 Glycosyl transferase 4-like domain AAA_29 PF13555.6 ORF102555 - 4.1e-05 23.2 0.1 0.00011 21.9 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF102555 - 7.3e-05 23.2 0.1 0.00018 22.0 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF102555 - 0.00057 19.7 0.3 0.0046 16.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 ORF102555 - 0.00064 20.0 0.0 0.0018 18.6 0.0 1.8 2 0 0 2 2 1 1 AAA domain AAA_18 PF13238.6 ORF102555 - 0.0022 18.5 0.0 0.0045 17.5 0.0 1.6 2 0 0 2 2 1 1 AAA domain NTPase_1 PF03266.15 ORF102555 - 0.0023 17.9 1.9 0.12 12.3 0.1 2.7 2 1 1 3 3 3 1 NTPase AAA_5 PF07728.14 ORF102555 - 0.0028 17.6 0.0 0.0061 16.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 ORF102555 - 0.005 17.3 0.0 0.01 16.4 0.0 1.6 1 0 0 1 1 1 1 ABC transporter FtsK_SpoIIIE PF01580.18 ORF102555 - 0.0092 15.4 0.0 0.016 14.5 0.0 1.4 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_19 PF13245.6 ORF102555 - 0.013 15.9 1.4 0.044 14.1 0.1 2.5 3 1 0 3 3 3 0 AAA domain Rad17 PF03215.15 ORF102555 - 0.013 15.5 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_11 PF13086.6 ORF102555 - 0.013 15.3 0.6 0.042 13.6 0.1 2.0 2 1 0 2 2 2 0 AAA domain AAA_21 PF13304.6 ORF102555 - 0.015 15.1 0.0 0.02 14.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_14 PF13173.6 ORF102555 - 0.018 15.1 0.0 0.035 14.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF102555 - 0.022 14.8 0.1 0.065 13.3 0.0 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain AAA PF00004.29 ORF102555 - 0.033 14.6 0.1 0.079 13.4 0.0 1.7 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) Herpes_Helicase PF02689.14 ORF102555 - 0.044 11.7 0.0 0.06 11.3 0.0 1.1 1 0 0 1 1 1 0 Helicase ATPase_2 PF01637.18 ORF102555 - 0.061 13.2 0.0 0.12 12.3 0.0 1.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_7 PF12775.7 ORF102555 - 0.069 12.7 0.0 0.19 11.2 0.0 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region SMC_N PF02463.19 ORF102555 - 0.072 12.5 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Zeta_toxin PF06414.12 ORF102555 - 0.079 12.2 0.0 0.17 11.2 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin DUF561 PF04481.12 ORF102555 - 0.099 11.8 0.0 0.19 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF561) ATP_bind_1 PF03029.17 ORF102555 - 0.1 12.4 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 ORF102555 - 0.11 12.9 0.0 0.37 11.2 0.0 1.9 2 0 0 2 2 2 0 RNA helicase CbiA PF01656.23 ORF102555 - 0.17 11.9 0.1 0.21 11.7 0.1 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RhlB PF12300.8 NODE_21293_length_943_cov_3.175110_g16379_i0forward_frame_1 - 1.8 8.7 8.6 2.8 8.0 8.6 1.2 1 0 0 1 1 1 0 ATP-dependent RNA helicase RhlB adh_short PF00106.25 NODE_21123_length_947_cov_237.771930_g16242_i0forward_frame_3 - 5.7e-21 74.9 0.0 6.2e-20 71.5 0.0 2.0 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_21123_length_947_cov_237.771930_g16242_i0forward_frame_3 - 2.6e-12 46.8 0.0 1.4e-11 44.4 0.0 1.9 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DHC_N2 PF08393.13 NODE_21099_length_948_cov_116.736035_g16225_i0reverse_frame_3 - 4.3e-100 335.6 8.0 5.4e-100 335.3 8.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 PARP PF00644.20 ORF97473 - 5.1e-15 55.6 0.0 8.5e-15 54.9 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain CAP_assoc_N PF14504.6 ORF96351 - 0.064 13.0 0.7 0.18 11.5 0.7 1.7 1 0 0 1 1 1 0 CAP-associated N-terminal Lipid_bd PF12888.7 ORF96351 - 1.5 9.3 4.7 0.64 10.5 0.2 2.3 2 1 1 3 3 3 0 Lipid-binding putative hydrolase PAN_4 PF14295.6 ORF94183 - 0.00021 21.1 0.4 0.00021 21.1 0.4 2.3 3 0 0 3 3 3 1 PAN domain PAN_1 PF00024.26 ORF94183 - 0.00041 20.3 1.6 0.00042 20.2 0.2 1.7 2 0 0 2 2 2 1 PAN domain Pkinase PF00069.25 ORF9339 - 6.4e-51 173.2 0.1 7.4e-51 173.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF9339 - 1.6e-24 86.6 0.0 2.3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF9339 - 0.0027 17.1 0.0 0.0039 16.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF9339 - 0.11 11.9 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family MFS_1 PF07690.16 ORF87267 - 4.8e-17 61.9 11.7 5.9e-17 61.6 11.7 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily EF-hand_4 PF12763.7 ORF87240 - 0.00015 21.7 0.0 0.00029 20.7 0.0 1.5 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_7 PF13499.6 ORF87240 - 0.00015 22.1 0.3 0.00029 21.2 0.3 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF87240 - 0.0017 18.1 0.3 0.049 13.6 0.1 2.5 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF87240 - 0.0039 16.6 0.1 0.01 15.3 0.1 1.7 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF87240 - 0.13 12.2 0.1 0.73 9.7 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain pair ubiquitin PF00240.23 ORF85388 - 1.1e-27 95.5 0.0 2e-20 72.3 0.0 2.6 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 ORF85388 - 5.6e-09 35.7 0.1 4.4e-07 29.6 0.0 2.5 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF85388 - 0.00088 19.6 0.0 0.55 10.6 0.0 3.6 3 1 1 4 4 4 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 ORF85388 - 0.028 14.9 0.0 0.33 11.4 0.0 2.7 2 1 0 2 2 2 0 Ubiquitin-like domain YukD PF08817.10 ORF85388 - 0.098 13.4 0.0 0.28 11.9 0.0 1.8 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD Radical_SAM PF04055.21 ORF82453 - 1.2e-21 77.8 0.0 1.8e-21 77.2 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 ORF82453 - 1.8e-10 41.2 0.1 4.1e-10 40.1 0.1 1.6 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 ORF82453 - 0.00019 21.6 0.4 0.047 13.8 0.4 2.4 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_6 PF12837.7 ORF82453 - 0.14 12.3 1.8 0.32 11.1 1.8 1.6 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4_9 PF13187.6 ORF82453 - 0.49 10.6 6.8 1.1 9.5 6.8 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Pkinase PF00069.25 ORF80784 - 6.4e-51 173.2 0.1 7.4e-51 173.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF80784 - 1.6e-24 86.6 0.0 2.3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF80784 - 0.0027 17.1 0.0 0.0039 16.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF80784 - 0.11 11.9 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family zf-B_box PF00643.24 ORF791 - 1.4e-06 28.3 4.7 1.4e-06 28.3 4.7 4.2 3 2 0 3 3 3 2 B-box zinc finger HTH_19 PF12844.7 ORF791 - 0.26 11.4 5.1 0.6 10.2 0.9 2.8 2 1 0 2 2 2 0 Helix-turn-helix domain AAA_9 PF12781.7 ORF76553 - 0.0017 17.5 0.0 0.0029 16.8 0.0 1.4 1 0 0 1 1 1 1 ATP-binding dynein motor region Band_7 PF01145.25 ORF7634 - 2.8e-19 69.8 0.1 2.8e-19 69.8 0.1 2.1 1 1 1 2 2 2 1 SPFH domain / Band 7 family DUF1515 PF07439.11 ORF7634 - 0.034 14.2 2.4 0.058 13.4 2.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1515) VIT1 PF01988.19 ORF7634 - 2.7 7.8 3.9 5.3 6.8 3.9 1.4 1 0 0 1 1 1 0 VIT family AlaDh_PNT_C PF01262.21 ORF72456 - 6.3e-35 120.4 0.3 9.8e-35 119.8 0.3 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain PNTB_4TM PF12769.7 ORF72456 - 1.1e-29 102.7 5.4 1.1e-29 102.7 5.4 2.2 2 0 0 2 2 2 1 4TM region of pyridine nucleotide transhydrogenase, mitoch Pox_A32 PF04665.12 ORF71259 - 7.2e-06 25.6 0.0 6.6e-05 22.5 0.0 1.9 2 0 0 2 2 2 1 Poxvirus A32 protein SIT PF15330.6 ORF70220 - 0.15 12.5 0.9 0.77 10.2 0.1 2.4 3 1 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT Peptidase_C1 PF00112.23 ORF70126 - 1.8e-57 195.0 5.4 2.4e-57 194.5 5.4 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF70126 - 2e-10 40.9 0.3 4e-10 40.0 0.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF70126 - 9.2e-06 24.7 3.3 0.0087 14.9 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family TPR_1 PF00515.28 ORF69301 - 3.8e-17 61.3 5.6 2.6e-07 30.2 0.2 3.8 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF69301 - 1.1e-15 56.3 3.2 6.8e-08 32.1 0.6 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF69301 - 3.5e-10 39.3 0.3 4.6e-05 23.3 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF69301 - 7.2e-07 29.5 3.4 0.0025 18.5 1.0 3.9 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 ORF69301 - 1.1e-05 25.8 2.7 0.026 15.1 0.3 3.9 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF69301 - 1.6e-05 24.6 0.8 0.43 10.7 0.2 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF69301 - 9.5e-05 22.6 1.5 9.5e-05 22.6 1.5 2.8 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF69301 - 0.011 15.9 0.1 0.011 15.9 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Uteroglobin PF01099.17 ORF69301 - 0.037 14.4 2.8 1.2 9.5 0.7 2.4 2 0 0 2 2 2 0 Uteroglobin family TPR_19 PF14559.6 ORF69301 - 0.04 14.4 5.8 1.6 9.3 0.6 3.5 2 1 2 4 4 4 0 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF69301 - 0.048 13.9 0.7 0.1 12.8 0.7 1.7 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF69301 - 0.053 14.2 0.7 0.053 14.2 0.7 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF69301 - 0.069 13.6 0.1 17 6.1 0.0 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat Peptidase_C1 PF00112.23 ORF69175 - 2.4e-57 194.5 4.9 3.2e-57 194.1 4.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF69175 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF69175 - 9.8e-06 24.6 3.5 0.0083 14.9 0.3 2.4 2 1 0 2 2 2 2 Peptidase C1-like family COLFI PF01410.18 ORF66261 - 0.057 12.7 2.7 0.28 10.4 0.0 2.2 2 0 0 2 2 2 0 Fibrillar collagen C-terminal domain Cupin_8 PF13621.6 ORF62499 - 6.2e-29 101.5 0.7 7.5e-29 101.2 0.7 1.2 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF62499 - 0.00022 20.8 1.6 0.00047 19.7 1.6 1.6 1 1 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF62499 - 0.0016 18.9 0.0 0.0031 17.9 0.0 1.5 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_2 PF07883.11 ORF62499 - 0.011 15.4 0.0 0.022 14.5 0.0 1.5 1 0 0 1 1 1 0 Cupin domain DivIC PF04977.15 ORF60254 - 0.1 12.4 2.7 2.1 8.1 0.3 2.8 2 0 0 2 2 2 0 Septum formation initiator HLH PF00010.26 ORF60254 - 1.3 9.1 5.9 0.74 9.8 0.2 2.8 3 0 0 3 3 3 0 Helix-loop-helix DNA-binding domain bZIP_1 PF00170.21 ORF60254 - 5 7.3 11.9 6 7.0 1.9 3.6 3 0 0 3 3 3 0 bZIP transcription factor Aminotran_3 PF00202.21 ORF57836 - 9.2e-83 278.1 0.0 1.1e-82 277.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 ORF57836 - 0.2 10.8 0.0 0.24 10.6 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class I and II PPR PF01535.20 ORF57226 - 0.0004 20.5 0.0 43 4.7 0.0 5.0 5 0 0 5 5 5 1 PPR repeat TPR_7 PF13176.6 ORF57226 - 0.019 15.0 0.1 15 5.9 0.0 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat Vps36-NZF-N PF16988.5 ORF57221 - 0.023 14.1 0.7 0.07 12.5 0.7 1.9 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-Sec23_Sec24 PF04810.15 ORF57221 - 1.2 9.2 5.3 0.16 12.1 0.7 1.9 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger Sar8_2 PF03058.14 ORF57221 - 1.7 9.2 7.4 0.21 12.2 2.5 2.1 2 1 0 2 2 2 0 Sar8.2 family GerD PF17898.1 ORF54733 - 0.89 9.5 6.5 0.63 10.0 1.2 2.4 2 0 0 2 2 2 0 Spore germination GerD central core domain Vps36-NZF-N PF16988.5 ORF53076 - 0.023 14.1 0.7 0.07 12.5 0.7 1.9 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-Sec23_Sec24 PF04810.15 ORF53076 - 1.2 9.2 5.3 0.16 12.1 0.7 1.9 1 1 1 2 2 2 0 Sec23/Sec24 zinc finger Sar8_2 PF03058.14 ORF53076 - 1.7 9.2 7.4 0.21 12.2 2.5 2.1 2 1 0 2 2 2 0 Sar8.2 family TPR_2 PF07719.17 ORF52621 - 3.2e-19 67.4 6.7 6e-05 22.8 0.0 5.2 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF52621 - 4e-19 67.5 4.5 5.3e-05 22.9 0.0 4.4 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_8 PF13181.6 ORF52621 - 1.9e-12 46.4 2.3 0.0016 18.5 0.2 4.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 ORF52621 - 2.3e-12 46.6 8.7 0.0014 19.2 0.1 5.2 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF52621 - 1.8e-11 44.2 12.2 0.0027 17.9 0.3 4.3 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_11 PF13414.6 ORF52621 - 4.3e-11 42.3 4.1 1.8e-05 24.3 0.0 4.3 3 2 1 4 4 4 3 TPR repeat TPR_19 PF14559.6 ORF52621 - 1.1e-09 38.6 6.7 0.00053 20.5 2.9 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF52621 - 1.2e-08 34.8 6.7 0.0056 17.0 0.0 5.3 5 1 1 6 6 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF52621 - 1.4e-08 34.2 4.6 0.083 13.0 0.1 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF52621 - 3.6e-05 23.5 9.2 0.31 11.0 0.1 4.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF52621 - 5.3e-05 23.3 6.9 0.095 12.9 1.9 4.6 2 1 4 6 6 6 3 Tetratricopeptide repeat TPR_15 PF13429.6 ORF52621 - 0.0002 20.7 1.4 0.058 12.6 0.3 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF52621 - 0.00091 19.8 13.0 0.12 13.0 0.2 4.3 4 1 0 4 4 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF52621 - 0.0023 18.4 8.2 0.12 13.0 1.5 4.1 4 0 0 4 4 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF52621 - 0.0023 18.1 3.2 0.004 17.3 0.2 2.5 2 1 1 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 ORF52621 - 0.003 18.1 9.4 11 6.9 0.1 4.8 5 0 0 5 5 4 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF52621 - 0.014 14.8 6.7 0.8 9.0 0.1 3.0 2 2 1 3 3 3 0 MalT-like TPR region DUF3856 PF12968.7 ORF52621 - 0.021 14.9 0.2 6.3 6.9 0.0 3.2 1 1 1 3 3 3 0 Domain of Unknown Function (DUF3856) TPR_3 PF07720.12 ORF52621 - 0.022 14.7 1.8 0.31 11.1 0.4 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat BTAD PF03704.17 ORF52621 - 0.054 13.9 1.3 6.5 7.2 0.1 2.8 2 1 1 3 3 3 0 Bacterial transcriptional activator domain Coatomer_E PF04733.14 ORF52621 - 0.11 12.0 0.2 0.87 8.9 0.1 2.2 2 1 0 2 2 2 0 Coatomer epsilon subunit MIT PF04212.18 ORF52621 - 0.11 12.6 3.5 0.18 11.9 0.3 2.9 2 1 1 3 3 3 0 MIT (microtubule interacting and transport) domain NARP1 PF12569.8 ORF52621 - 0.19 10.6 0.2 1.3 7.9 0.1 1.9 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 UPF0184 PF03670.13 ORF522 - 0.032 14.6 0.1 1.7 9.1 0.0 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0184) 2OG-FeII_Oxy_3 PF13640.6 ORF50149 - 1.6e-08 35.3 0.0 2.6e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 ORF50149 - 0.0099 16.4 0.0 0.017 15.6 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Peptidase_C1 PF00112.23 ORF48673 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF48673 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF48673 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family Pkinase PF00069.25 ORF45724 - 6.4e-51 173.2 0.1 7.4e-51 173.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF45724 - 1.6e-24 86.6 0.0 2.3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF45724 - 0.0027 17.1 0.0 0.0039 16.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF45724 - 0.11 11.9 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family TraF PF13728.6 ORF42888 - 0.0006 19.7 0.0 0.0051 16.7 0.0 2.0 2 0 0 2 2 2 1 F plasmid transfer operon protein DUF2946 PF11162.8 ORF42888 - 0.066 13.9 5.6 0.23 12.1 5.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2946) Thioredoxin_2 PF13098.6 ORF42888 - 0.085 13.3 0.0 0.31 11.5 0.0 1.9 1 1 0 1 1 1 0 Thioredoxin-like domain SNARE PF05739.19 ORF42888 - 0.15 12.1 0.7 8.8 6.4 0.0 2.8 3 0 0 3 3 3 0 SNARE domain Glucos_trans_II PF14264.6 ORF42888 - 0.18 11.1 1.2 0.32 10.3 0.9 1.4 1 1 0 1 1 1 0 Glucosyl transferase GtrII Peptidase_C1 PF00112.23 ORF363 - 2.6e-57 194.4 5.7 3.5e-57 194.0 5.7 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF363 - 2.1e-10 40.8 0.3 4e-10 40.0 0.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF363 - 5.9e-06 25.3 2.9 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family Pkinase PF00069.25 ORF32924 - 6.4e-51 173.2 0.1 7.4e-51 173.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF32924 - 1.6e-24 86.6 0.0 2.3e-24 86.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF32924 - 0.0027 17.1 0.0 0.0039 16.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF32924 - 0.11 11.9 0.0 0.17 11.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family COX_ARM PF06481.14 ORF32532 - 3.5e-19 68.4 0.1 2.7e-18 65.6 0.5 2.1 2 0 0 2 2 2 1 COX Aromatic Rich Motif COX2 PF00116.20 ORF32532 - 6.9e-06 26.0 0.1 2.5e-05 24.1 0.0 1.9 1 1 1 2 2 2 1 Cytochrome C oxidase subunit II, periplasmic domain FtsX PF02687.21 ORF32532 - 0.002 18.6 0.8 0.0045 17.4 0.8 1.5 1 0 0 1 1 1 1 FtsX-like permease family Cupredoxin_1 PF13473.6 ORF32532 - 0.0023 18.0 0.0 0.0059 16.7 0.0 1.6 1 0 0 1 1 1 1 Cupredoxin-like domain COX2_TM PF02790.15 ORF32532 - 0.0025 17.9 0.6 0.0054 16.9 0.6 1.6 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, transmembrane domain TspO_MBR PF03073.15 ORF32532 - 0.13 12.3 5.0 0.24 11.5 5.0 1.4 1 0 0 1 1 1 0 TspO/MBR family DUF5385 PF17359.2 ORF32532 - 0.17 11.4 0.1 0.27 10.7 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5385) Peptidase_C1 PF00112.23 ORF31044 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF31044 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF31044 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family NADH-G_4Fe-4S_3 PF10588.9 ORF28380 - 0.041 13.4 0.0 0.12 11.9 0.0 1.8 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Mo25 PF08569.11 ORF23853 - 1.4e-22 80.5 13.1 1.6e-22 80.3 13.1 1.0 1 0 0 1 1 1 1 Mo25-like VHS PF00790.19 ORF23853 - 0.00099 19.0 4.8 0.0022 17.8 0.2 2.9 2 1 1 3 3 3 1 VHS domain Katanin_con80 PF13925.6 ORF23853 - 0.0075 16.3 2.5 0.58 10.2 0.0 3.5 3 1 1 4 4 4 1 con80 domain of Katanin Rcd1 PF04078.13 ORF23853 - 0.032 13.5 3.5 0.15 11.3 3.5 2.2 1 1 0 1 1 1 0 Cell differentiation family, Rcd1-like Elf4 PF07011.11 ORF23853 - 0.11 12.4 2.8 1.4 8.9 0.1 2.6 2 0 0 2 2 2 0 Early Flowering 4 domain Thioredoxin_14 PF18402.1 ORF18043 - 0.00039 20.5 0.1 0.13 12.2 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin-like domain AMP-binding PF00501.28 ORF17242 - 2e-39 135.4 0.0 2.6e-39 135.0 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF17242 - 4.5e-05 24.4 0.0 0.00011 23.1 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Thioredoxin_14 PF18402.1 ORF152823 - 0.00039 20.5 0.1 0.13 12.2 0.0 2.1 2 0 0 2 2 2 2 Thioredoxin-like domain Spc7 PF08317.11 ORF148075 - 0.00026 20.0 15.7 0.00026 20.0 15.7 2.5 3 0 0 3 3 3 1 Spc7 kinetochore protein ERM PF00769.19 ORF148075 - 0.00062 19.6 33.7 0.00062 19.6 33.7 2.5 2 1 1 3 3 3 1 Ezrin/radixin/moesin family DPM3 PF08285.11 ORF148075 - 0.91 9.8 2.2 3.4 7.9 2.2 2.0 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) CorA PF01544.18 ORF148075 - 3.4 6.9 13.0 3.9 6.7 2.3 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein V_ATPase_I PF01496.19 ORF148075 - 5.3 4.8 41.0 0.46 8.3 12.7 2.1 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family MtrB PF05440.12 ORF148075 - 8.8 6.8 7.3 15 6.1 0.4 3.2 3 1 1 4 4 4 0 Tetrahydromethanopterin S-methyltransferase subunit B Peptidase_C1 PF00112.23 ORF14664 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF14664 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF14664 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family HapK PF11639.8 ORF146404 - 0.066 13.7 1.6 8 7.0 0.1 2.7 2 1 1 3 3 3 0 REDY-like protein HapK TAFII28 PF04719.14 ORF146404 - 1.2 9.3 3.0 25 5.1 0.1 2.8 2 0 0 2 2 2 0 hTAFII28-like protein conserved region Phage_DNA_bind PF02303.17 ORF146404 - 4.4 7.6 5.6 94 3.4 0.0 4.5 4 1 1 5 5 5 0 Helix-destabilising protein Citrate_synt PF00285.21 ORF146209 - 4.6e-108 361.5 0.2 5.1e-108 361.4 0.2 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain FAP206 PF12018.8 ORF144607 - 2.7 7.4 12.6 23 4.4 12.6 2.2 1 1 0 1 1 1 0 Domain of unknown function Peptidase_C1 PF00112.23 ORF144593 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF144593 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF144593 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF140610 - 6.9e-58 196.3 5.5 9.2e-58 195.9 5.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF140610 - 2e-10 41.0 0.3 4e-10 40.0 0.3 1.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF140610 - 7.2e-06 25.0 3.2 0.0069 15.2 0.2 2.4 2 1 0 2 2 2 2 Peptidase C1-like family PPR PF01535.20 ORF139779 - 0.0004 20.5 0.0 43 4.7 0.0 5.0 5 0 0 5 5 5 1 PPR repeat TPR_7 PF13176.6 ORF139779 - 0.019 15.0 0.1 15 5.9 0.0 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat Metallophos PF00149.28 ORF13653 - 1.3e-38 133.5 0.1 1.9e-38 133.0 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF13653 - 6.1e-20 71.4 0.2 1.4e-19 70.3 0.2 1.6 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain DUF832 PF05734.11 ORF13653 - 0.12 11.8 0.2 0.18 11.2 0.2 1.2 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) Zn-ribbon_8 PF09723.10 ORF123069 - 0.00017 21.6 3.8 0.00034 20.7 3.8 1.5 1 0 0 1 1 1 1 Zinc ribbon domain DNA_RNApol_7kD PF03604.13 ORF123069 - 0.021 14.5 1.4 0.051 13.3 1.4 1.7 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit FYVE PF01363.21 ORF123069 - 0.025 14.7 1.2 0.042 14.0 1.2 1.4 1 0 0 1 1 1 0 FYVE zinc finger HypA PF01155.19 ORF123069 - 0.034 14.1 2.0 0.068 13.2 2.0 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C2 PF00168.30 ORF121679 - 3.7e-16 59.3 0.2 5.3e-16 58.8 0.2 1.2 1 0 0 1 1 1 1 C2 domain Adeno_PV PF03910.13 ORF121260 - 6.5 5.3 5.2 8.8 4.9 5.2 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV Pox_A32 PF04665.12 ORF108350 - 1.7e-05 24.5 0.0 3.9e-05 23.2 0.0 1.5 1 1 0 1 1 1 1 Poxvirus A32 protein MR_MLE_C PF13378.6 ORF10832 - 1.8e-37 129.1 0.0 2.2e-37 128.8 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 ORF10832 - 5.7e-07 29.8 0.0 9e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BT1 PF03092.16 ORF106914 - 2.4e-09 36.0 1.0 6.6e-09 34.5 1.0 1.6 1 1 0 1 1 1 1 BT1 family PARP PF00644.20 ORF104698 - 1.2e-05 25.0 0.0 1.6e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Aldo_ket_red PF00248.21 ORF102879 - 1.8e-38 132.4 0.0 2.6e-36 125.3 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family CENP-F_leu_zip PF10473.9 ORF102075 - 1 9.4 21.5 1.3 9.0 10.2 2.3 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BBS1 PF14779.6 ORF102075 - 2.6 7.4 6.5 5.3 6.4 1.0 2.1 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 1 TSC22 PF01166.18 ORF102075 - 2.8 8.3 8.0 16 5.9 0.1 3.3 3 0 0 3 3 3 0 TSC-22/dip/bun family zf-RING_2 PF13639.6 ORF101410 - 7.6e-08 32.6 4.4 7.6e-08 32.6 4.4 2.9 2 1 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF101410 - 1.1e-07 31.5 4.8 3.5e-07 29.8 4.8 2.0 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF101410 - 1.4e-06 28.2 3.2 1.4e-06 28.2 3.2 2.8 3 0 0 3 3 3 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF101410 - 8.3e-06 25.6 3.2 8.3e-06 25.6 3.2 2.5 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_1 PF14446.6 ORF101410 - 9.4e-06 25.5 3.7 9.4e-06 25.5 3.7 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-C3HC4 PF00097.25 ORF101410 - 2.8e-05 23.9 2.5 2.8e-05 23.9 2.5 3.0 4 0 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF101410 - 7.5e-05 22.9 3.7 7.5e-05 22.9 3.7 2.5 2 1 1 3 3 3 1 RING-H2 zinc finger domain Zn_ribbon_17 PF17120.5 ORF101410 - 0.0013 18.3 4.0 0.0013 18.3 4.0 2.7 3 0 0 3 3 2 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF101410 - 0.0074 16.4 6.0 0.0079 16.3 3.4 2.5 2 0 0 2 2 2 1 FANCL C-terminal domain zf-RING_5 PF14634.6 ORF101410 - 0.0085 16.0 3.6 0.0085 16.0 3.6 2.8 2 0 0 2 2 2 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF101410 - 0.015 15.3 1.6 0.015 15.3 1.6 2.5 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Baculo_11_kDa PF06143.11 ORF101410 - 0.25 11.0 3.2 0.65 9.6 0.2 2.5 2 0 0 2 2 2 0 Baculovirus 11 kDa family Gln-synt_C PF00120.24 NODE_21293_length_943_cov_3.175110_g16379_i0reverse_frame_3 - 4.4e-41 141.0 0.0 6e-41 140.6 0.0 1.2 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N_2 PF16952.5 NODE_21293_length_943_cov_3.175110_g16379_i0reverse_frame_3 - 0.00011 22.0 0.0 0.0002 21.2 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase N-terminal domain DUF3327 PF11806.8 NODE_21293_length_943_cov_3.175110_g16379_i0forward_frame_2 - 0.32 11.7 2.6 0.53 11.0 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3327) SCRG1 PF15224.6 NODE_21224_length_944_cov_446.012101_g16324_i0forward_frame_3 - 0.046 13.8 2.2 0.11 12.6 2.2 1.6 1 0 0 1 1 1 0 Scrapie-responsive protein 1 ABC_tran PF00005.27 ORF98378 - 6.3e-20 72.1 0.0 2e-19 70.4 0.0 1.9 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF98378 - 9.1e-08 31.8 0.8 0.00047 19.7 0.1 2.6 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF98378 - 5.4e-05 23.5 0.0 0.00011 22.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 ORF98378 - 7.6e-05 22.7 0.0 0.00015 21.8 0.0 1.5 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea NB-ARC PF00931.22 ORF98378 - 0.00012 21.4 0.1 0.00043 19.5 0.0 1.9 2 0 0 2 2 2 1 NB-ARC domain RsgA_GTPase PF03193.16 ORF98378 - 0.00026 20.9 0.1 0.00091 19.2 0.0 1.8 2 1 0 2 2 2 1 RsgA GTPase AAA_18 PF13238.6 ORF98378 - 0.00034 21.1 0.0 0.0009 19.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 ORF98378 - 0.00045 20.3 0.0 0.0012 19.0 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 ORF98378 - 0.00055 20.0 1.5 0.00084 19.4 0.2 2.1 2 1 0 2 2 2 1 Dynamin family T2SSE PF00437.20 ORF98378 - 0.001 18.2 0.0 0.0017 17.5 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_PrkA PF08298.11 ORF98378 - 0.0011 18.0 0.3 0.0029 16.6 0.0 1.9 2 0 0 2 2 2 1 PrkA AAA domain NACHT PF05729.12 ORF98378 - 0.0013 18.7 0.2 0.0023 17.9 0.2 1.7 1 1 0 1 1 1 1 NACHT domain AAA_16 PF13191.6 ORF98378 - 0.0015 19.0 0.0 0.0033 17.8 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain PduV-EutP PF10662.9 ORF98378 - 0.0018 18.0 0.2 0.26 11.0 0.0 2.4 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation AAA_14 PF13173.6 ORF98378 - 0.0024 17.9 0.7 0.01 15.9 0.1 2.3 3 1 0 3 3 2 1 AAA domain AAA PF00004.29 ORF98378 - 0.0026 18.2 0.0 0.0071 16.8 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 ORF98378 - 0.0026 18.2 0.0 0.0051 17.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 ORF98378 - 0.0027 17.7 0.0 0.0062 16.5 0.0 1.6 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 ORF98378 - 0.0027 17.6 0.0 0.0055 16.6 0.0 1.6 1 1 0 1 1 1 1 Rad17 P-loop domain dNK PF01712.19 ORF98378 - 0.0034 17.3 0.4 0.022 14.6 0.1 2.2 2 0 0 2 2 2 1 Deoxynucleoside kinase cobW PF02492.19 ORF98378 - 0.0042 16.7 2.7 0.0077 15.8 0.0 2.5 3 0 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain AAA_21 PF13304.6 ORF98378 - 0.0044 16.9 0.0 0.34 10.7 0.1 2.4 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system RNA_helicase PF00910.22 ORF98378 - 0.0092 16.4 0.0 0.035 14.5 0.0 2.1 1 0 0 1 1 1 1 RNA helicase AAA_19 PF13245.6 ORF98378 - 0.01 16.2 0.0 0.024 15.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 ORF98378 - 0.018 15.0 0.6 0.095 12.6 0.1 2.2 2 1 0 2 2 2 0 NTPase AAA_7 PF12775.7 ORF98378 - 0.02 14.4 0.0 0.031 13.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Roc PF08477.13 ORF98378 - 0.037 14.2 0.0 2.3 8.5 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_33 PF13671.6 ORF98378 - 0.037 14.2 0.0 0.12 12.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain RuvB_N PF05496.12 ORF98378 - 0.048 13.4 0.0 0.085 12.6 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain ATP-synt_ab PF00006.25 ORF98378 - 0.08 12.6 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_29 PF13555.6 ORF98378 - 0.1 12.4 0.0 0.25 11.1 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF98378 - 0.12 12.8 0.1 0.12 12.8 0.1 2.4 3 1 1 4 4 2 0 AAA domain Mem_trans PF03547.18 ORF98378 - 0.2 10.0 0.8 0.33 9.3 0.8 1.3 1 0 0 1 1 1 0 Membrane transport protein TpcC PF12642.7 ORF97649 - 0.012 15.4 0.3 0.017 14.9 0.3 1.3 1 0 0 1 1 1 0 Conjugative transposon protein TcpC RHINO PF15319.6 ORF97649 - 0.014 15.4 1.6 0.02 14.9 1.6 1.2 1 0 0 1 1 1 0 RAD9, RAD1, HUS1-interacting nuclear orphan protein GEMIN8 PF15348.6 ORF97065 - 0.66 10.2 10.9 1.1 9.5 10.9 1.3 1 0 0 1 1 1 0 Gemini of Cajal bodies-associated protein 8 DDRGK PF09756.9 ORF97065 - 1.6 8.3 15.0 2.3 7.8 15.0 1.2 1 0 0 1 1 1 0 DDRGK domain Zip PF02535.22 ORF97065 - 2 7.6 3.0 2.4 7.3 3.0 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter DUF4064 PF13273.6 ORF96401 - 0.065 13.5 7.2 4.2 7.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) DUF373 PF04123.13 ORF96401 - 0.072 12.5 4.4 0.1 12.1 4.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DHHC PF01529.20 ORF96401 - 0.4 10.8 15.8 0.32 11.1 6.6 2.5 2 1 1 3 3 3 0 DHHC palmitoyltransferase Comm PF15957.5 ORF96401 - 2.3 8.6 8.7 0.45 10.9 3.3 2.6 2 0 0 2 2 2 0 Commissureless TMEM52 PF14979.6 ORF96401 - 6.1 6.7 11.0 2.9 7.8 6.1 2.5 2 0 0 2 2 2 0 Transmembrane 52 Glutaredoxin PF00462.24 ORF92110 - 6.6e-12 45.5 0.1 3.8e-11 43.0 0.0 2.1 2 0 0 2 2 2 1 Glutaredoxin PAP_fibrillin PF04755.12 ORF92110 - 1e-09 38.6 0.0 1.6e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 PAP_fibrillin Thioredoxin_2 PF13098.6 ORF92110 - 0.13 12.7 0.0 0.76 10.2 0.0 2.2 2 0 0 2 2 2 0 Thioredoxin-like domain MT-A70 PF05063.14 ORF91862 - 4e-50 170.1 0.0 5.6e-50 169.6 0.0 1.2 1 0 0 1 1 1 1 MT-A70 Fur_reg_FbpA PF13076.6 ORF91862 - 0.1 12.3 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Fur-regulated basic protein A S1-P1_nuclease PF02265.16 ORF88733 - 4e-47 161.2 0.3 5.2e-47 160.8 0.3 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease DHHC PF01529.20 ORF76420 - 5.1e-31 107.5 24.6 5.1e-31 107.5 24.6 2.3 2 0 0 2 2 2 1 DHHC palmitoyltransferase FA_desaturase PF00487.24 ORF76420 - 0.21 11.4 11.0 0.19 11.6 1.2 2.2 2 0 0 2 2 2 0 Fatty acid desaturase DUF1664 PF07889.12 ORF74804 - 0.053 13.6 13.5 0.26 11.3 0.5 4.0 2 1 2 4 4 4 0 Protein of unknown function (DUF1664) Cep57_CLD_2 PF14197.6 ORF74804 - 0.15 12.2 4.0 4.5 7.4 0.1 3.0 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 Rbsn PF11464.8 ORF74804 - 0.19 11.4 0.1 0.19 11.4 0.1 5.8 6 1 1 7 7 7 0 Rabenosyn Rab binding domain CCM2_C PF16545.5 ORF74804 - 0.22 12.1 8.2 0.55 10.8 0.8 3.5 2 2 2 4 4 4 0 Cerebral cavernous malformation protein, harmonin-homology Vps51 PF08700.11 ORF74804 - 0.35 11.0 11.0 0.27 11.3 0.6 3.8 4 1 0 4 4 4 0 Vps51/Vps67 YtxH PF12732.7 ORF74804 - 1.6 9.3 5.0 2.3e+02 2.4 5.0 3.7 1 1 0 1 1 1 0 YtxH-like protein Fzo_mitofusin PF04799.13 ORF74804 - 3.1 7.3 15.0 0.16 11.5 2.2 3.4 1 1 3 4 4 4 0 fzo-like conserved region ArAE_2_N PF10337.9 ORF74804 - 5.8 5.8 9.4 1.8 7.5 1.7 2.1 1 1 0 2 2 2 0 Putative ER transporter, 6TM, N-terminal Retrotrans_gag PF03732.17 ORF74804 - 6.9 7.0 10.2 1.8 8.9 1.4 3.6 2 1 2 4 4 4 0 Retrotransposon gag protein WWE PF02825.20 ORF73251 - 0.00076 20.0 0.5 0.89 10.2 0.1 2.6 2 1 0 2 2 2 2 WWE domain HypA PF01155.19 ORF72525 - 0.0021 18.0 1.6 0.082 12.9 0.8 2.3 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF35_N PF12172.8 ORF72525 - 0.02 14.8 4.9 5.4 7.0 0.5 3.9 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) NMD3 PF04981.13 ORF72525 - 0.17 11.3 2.2 0.45 9.9 0.7 2.1 2 1 0 2 2 2 0 NMD3 family DZR PF12773.7 ORF72525 - 0.26 11.3 10.0 2.4 8.3 0.2 2.7 2 1 1 3 3 3 0 Double zinc ribbon ADK_lid PF05191.14 ORF72525 - 0.31 11.0 3.4 1.9 8.5 1.3 2.5 2 0 0 2 2 2 0 Adenylate kinase, active site lid Zn-ribbon_8 PF09723.10 ORF72525 - 0.59 10.3 9.6 1 9.5 1.7 2.9 2 1 0 2 2 2 0 Zinc ribbon domain zf-RING_2 PF13639.6 ORF72525 - 2.4 8.6 9.1 0.5 10.8 2.5 2.5 2 0 0 2 2 2 0 Ring finger domain zf-ribbon_3 PF13248.6 ORF72525 - 3.9 7.0 19.0 1.1 8.8 1.7 3.8 4 0 0 4 4 4 0 zinc-ribbon domain Ribosomal_L32p PF01783.23 ORF72525 - 6.5 7.1 5.9 52 4.2 0.0 3.4 2 1 0 2 2 2 0 Ribosomal L32p protein family Zn_ribbon_recom PF13408.6 ORF72525 - 8.5 7.0 7.8 62 4.2 0.1 3.2 2 1 1 3 3 3 0 Recombinase zinc beta ribbon domain EF-hand_1 PF00036.32 ORF70660 - 2.4e-26 89.3 7.9 2.1e-05 23.7 0.1 5.5 5 0 0 5 5 5 5 EF hand EF-hand_7 PF13499.6 ORF70660 - 8.2e-26 90.3 7.5 3.9e-10 40.0 0.7 3.6 2 1 0 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF70660 - 1.1e-25 87.2 10.1 6.5e-05 22.6 0.0 5.6 5 0 0 5 5 5 5 EF-hand domain EF-hand_8 PF13833.6 ORF70660 - 4.2e-16 58.5 12.0 5.5e-07 29.3 0.2 5.5 3 2 2 5 5 5 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF70660 - 1.9e-13 49.2 12.9 5e-05 22.6 0.1 5.5 6 0 0 6 6 6 4 EF hand SPARC_Ca_bdg PF10591.9 ORF70660 - 3e-07 30.7 0.4 0.023 15.0 0.0 3.4 2 1 1 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF70660 - 0.00055 20.2 0.1 0.098 13.0 0.0 3.2 3 0 0 3 3 3 1 EF-hand domain EF-hand_4 PF12763.7 ORF70660 - 0.016 15.2 3.3 9.1 6.3 0.1 3.7 2 2 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand Haemagg_act PF05860.13 ORF70660 - 0.036 13.9 0.1 0.14 12.0 0.0 2.0 2 1 1 3 3 3 0 haemagglutination activity domain DUF5580 PF17743.1 ORF70660 - 0.043 12.4 0.0 0.27 9.7 0.0 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 ORF70660 - 0.044 13.7 0.6 7.1 6.6 0.0 3.1 2 0 0 2 2 2 0 EF hand p25-alpha PF05517.12 ORF70660 - 0.11 12.7 2.0 2.3 8.4 0.7 2.7 2 2 0 2 2 2 0 p25-alpha MFS_5 PF05631.14 ORF67123 - 7.6e-45 153.4 4.8 1e-44 152.9 4.8 1.2 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM DUF2457 PF10446.9 ORF65695 - 0.042 13.0 6.4 0.057 12.6 6.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DUF1471 PF07338.13 ORF5494 - 3.3e-58 193.5 16.3 6.5e-21 74.1 0.2 3.7 4 0 0 4 4 4 3 Protein of unknown function (DUF1471) Peptidase_C1 PF00112.23 ORF54532 - 3.2e-59 200.7 3.2 5.2e-59 200.0 3.2 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF54532 - 2.2e-16 60.0 2.1 4.2e-16 59.1 2.1 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Fungal_lectin_2 PF18647.1 ORF54532 - 1 9.8 8.4 7.6 7.1 0.2 3.0 2 1 1 3 3 3 0 Alpha-galactosyl-binding fungal lectin ProQ_C PF17516.2 ORF50605 - 0.0011 18.4 0.1 0.025 14.0 0.0 2.4 2 0 0 2 2 2 1 ProQ C-terminal domain L_lactis_ph-MCP PF06673.11 ORF50605 - 0.065 12.2 0.0 0.091 11.7 0.0 1.2 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein zf-B_box PF00643.24 ORF49975 - 0.0091 16.1 1.9 0.0091 16.1 1.9 6.2 7 0 0 7 7 7 3 B-box zinc finger zf-C3HC4_3 PF13920.6 ORF49975 - 0.016 15.0 9.4 0.016 15.0 9.4 5.5 5 3 0 5 5 5 0 Zinc finger, C3HC4 type (RING finger) zf-C2H2_4 PF13894.6 ORF49975 - 0.71 10.9 0.2 0.71 10.9 0.2 6.5 5 4 0 5 5 5 0 C2H2-type zinc finger YceD PF02620.17 ORF49975 - 6.6 6.9 11.4 0.1 12.8 2.4 2.5 3 0 0 3 3 3 0 Large ribosomal RNA subunit accumulation protein YceD IclR PF01614.18 ORF49919 - 1.1e-44 151.4 0.0 1.6e-44 150.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 ORF49919 - 2.8e-14 52.6 0.0 5.5e-14 51.7 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 ORF49919 - 0.00019 21.3 0.0 0.00042 20.1 0.0 1.6 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 ORF49919 - 0.015 15.7 0.0 0.03 14.7 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator ApoA-II PF04711.13 ORF49919 - 0.024 14.8 0.2 0.065 13.4 0.0 1.8 2 0 0 2 2 2 0 Apolipoprotein A-II (ApoA-II) TrmB PF01978.19 ORF49919 - 0.028 14.3 0.0 0.082 12.8 0.0 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 ORF49919 - 0.092 12.3 0.0 0.2 11.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF1295 PF06966.12 ORF48834 - 9.5e-11 41.7 0.3 9.5e-11 41.7 0.3 1.7 2 1 0 2 2 2 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF48834 - 6.9e-07 29.6 1.2 6.9e-07 29.6 1.2 2.3 3 0 0 3 3 3 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF48834 - 0.00028 20.9 2.0 0.00028 20.9 2.0 2.9 2 1 1 3 3 3 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF48834 - 0.004 17.5 0.3 0.004 17.5 0.3 2.7 3 0 0 3 3 3 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family RdDM_RDM1 PF09187.10 ORF48834 - 0.077 13.1 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 RNA-directed DNA methylation 1 TruB_N PF01509.18 ORF4068 - 1.1e-57 194.6 0.0 1.4e-57 194.2 0.0 1.2 1 0 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 ORF4068 - 5e-22 77.8 0.1 9.3e-22 77.0 0.1 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain TruB-C_2 PF09157.11 ORF4068 - 1.1e-19 70.2 0.1 2.7e-19 69.0 0.1 1.7 1 0 0 1 1 1 1 Pseudouridine synthase II TruB, C-terminal Yip1 PF04893.17 ORF38787 - 1.8e-09 37.6 12.1 2.7e-09 37.0 12.1 1.3 1 0 0 1 1 1 1 Yip1 domain Cons_hypoth95 PF03602.15 ORF36942 - 1e-18 67.6 0.1 2.9e-15 56.4 0.1 2.6 2 1 1 3 3 3 2 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 ORF36942 - 0.0027 18.4 0.2 0.09 13.5 0.2 2.4 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF36942 - 0.039 13.7 0.1 0.93 9.3 0.1 2.1 1 1 1 2 2 2 0 Methyltransferase domain MTS PF05175.14 ORF36942 - 0.21 11.1 0.0 0.34 10.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain PA14 PF07691.12 ORF351 - 0.11 12.3 0.0 0.15 11.8 0.0 1.2 1 0 0 1 1 1 0 PA14 domain FA_hydroxylase PF04116.13 ORF32751 - 1.2e-17 64.5 14.7 1.2e-17 64.5 14.7 2.0 2 0 0 2 2 2 1 Fatty acid hydroxylase superfamily CAF1 PF04857.20 ORF27082 - 0.022 14.0 0.6 0.027 13.7 0.6 1.3 1 0 0 1 1 1 0 CAF1 family ribonuclease DUF3402 PF11882.8 ORF23507 - 1.8e-19 70.2 0.1 1.3e-16 60.7 0.1 2.2 2 1 0 2 2 2 2 Domain of unknown function (DUF3402) TRP PF06011.12 ORF23242 - 1.8e-05 23.6 7.3 2.5e-05 23.2 7.3 1.2 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Tantalus PF15386.6 ORF23242 - 0.0027 17.8 2.7 0.0027 17.8 0.4 2.3 2 0 0 2 2 2 1 Drosophila Tantalus-like NinD PF17466.2 ORF22308 - 0.4 10.8 4.3 1.3 9.2 4.3 1.8 1 0 0 1 1 1 0 Family of unknown function Sacchrp_dh_NADP PF03435.18 ORF20980 - 6.8 7.0 7.0 1.1 9.5 0.4 2.7 2 1 1 3 3 3 0 Saccharopine dehydrogenase NADP binding domain Endonuc-BglII PF09195.11 ORF20980 - 8.2 6.2 10.9 9.7 6.0 2.4 3.0 2 1 1 3 3 3 0 Restriction endonuclease BglII Dermcidin PF15291.6 ORF20566 - 0.65 10.6 3.2 2.4 8.8 3.2 1.9 1 0 0 1 1 1 0 Dermcidin, antibiotic peptide Sacchrp_dh_NADP PF03435.18 ORF17846 - 6.8 7.0 7.0 1.1 9.5 0.4 2.7 2 1 1 3 3 3 0 Saccharopine dehydrogenase NADP binding domain Endonuc-BglII PF09195.11 ORF17846 - 8.2 6.2 10.9 9.7 6.0 2.4 3.0 2 1 1 3 3 3 0 Restriction endonuclease BglII ubiquitin PF00240.23 ORF17827 - 1e-14 54.0 0.0 1.7e-14 53.3 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF17827 - 0.00068 19.4 0.0 0.0014 18.5 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like SAM_3 PF18016.1 ORF17827 - 0.016 15.0 0.0 0.036 13.9 0.0 1.5 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Ubiquitin_2 PF14560.6 ORF17827 - 0.028 14.9 0.0 0.052 14.0 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-like domain SAM_PNT PF02198.16 ORF17827 - 0.035 14.1 0.0 0.082 12.9 0.0 1.6 1 1 0 1 1 1 0 Sterile alpha motif (SAM)/Pointed domain HEAT_2 PF13646.6 ORF17083 - 3.7e-11 43.2 7.7 0.00048 20.5 0.3 3.9 1 1 3 4 4 4 3 HEAT repeats HEAT PF02985.22 ORF17083 - 1.4e-08 34.3 10.3 0.0026 17.9 0.0 6.3 7 0 0 7 7 7 3 HEAT repeat Cnd1 PF12717.7 ORF17083 - 5.9e-05 23.2 0.0 2.7 8.0 0.1 3.1 2 1 1 3 3 3 3 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 ORF17083 - 6.6e-05 22.8 2.8 0.041 13.9 0.0 3.3 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.20 ORF17083 - 0.0086 14.7 0.4 1.6 7.2 0.2 1.9 1 1 1 2 2 2 2 Adaptin N terminal region HEAT_EZ PF13513.6 ORF17083 - 0.017 15.6 12.4 0.11 13.0 0.1 5.1 4 2 2 6 6 6 0 HEAT-like repeat CLASP_N PF12348.8 ORF17083 - 0.026 14.1 0.0 0.23 11.0 0.0 2.2 2 0 0 2 2 2 0 CLASP N terminal RTP1_C1 PF10363.9 ORF17083 - 0.054 13.7 0.0 1.1 9.4 0.0 2.5 1 1 1 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF4042 PF13251.6 ORF17083 - 0.11 12.1 0.1 8.8 6.0 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4042) HEAT_PBS PF03130.16 ORF17083 - 0.93 10.4 9.2 2.1 9.3 0.7 4.6 6 1 0 6 6 6 0 PBS lyase HEAT-like repeat PCNA_C PF02747.15 ORF14420 - 2.5e-42 144.1 0.0 2.9e-40 137.4 0.0 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 ORF14420 - 4e-37 126.7 1.5 4e-37 126.7 1.5 1.5 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF14420 - 0.00016 21.2 0.2 0.00021 20.8 0.2 1.1 1 0 0 1 1 1 1 Rad9 Methyltransf_25 PF13649.6 ORF143627 - 5.3e-14 52.7 0.1 2.4e-13 50.6 0.0 2.2 3 0 0 3 3 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF143627 - 7.7e-14 52.2 0.8 1e-12 48.6 0.0 2.8 3 1 0 3 3 3 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF143627 - 1.9e-13 50.8 0.0 7e-13 49.1 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF143627 - 2.5e-13 50.1 0.3 5.8e-13 48.9 0.3 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF143627 - 6.7e-09 35.8 0.0 1e-08 35.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF143627 - 3.2e-07 29.9 0.3 5.8e-07 29.1 0.3 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 ORF143627 - 5.2e-07 29.2 0.0 7.8e-07 28.7 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.17 ORF143627 - 3.2e-06 26.7 0.0 1.1e-05 24.9 0.0 1.9 2 0 0 2 2 2 1 Putative methyltransferase tRNA_U5-meth_tr PF05958.11 ORF143627 - 2.7e-05 23.4 0.4 6e-05 22.2 0.0 1.7 2 1 0 2 2 2 1 tRNA (Uracil-5-)-methyltransferase MTS PF05175.14 ORF143627 - 6.2e-05 22.6 0.0 0.00015 21.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 ORF143627 - 0.00012 22.1 0.1 0.00029 20.8 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_15 PF09445.10 ORF143627 - 0.00019 21.0 0.5 0.00055 19.6 0.0 1.9 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase Methyltransf_32 PF13679.6 ORF143627 - 0.0046 16.9 0.0 0.019 15.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 ORF143627 - 0.006 16.0 0.2 0.015 14.7 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 ORF143627 - 0.0084 15.9 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Phage_Gp15 PF06854.11 ORF143627 - 0.015 15.3 1.7 0.015 15.3 1.7 2.7 2 1 0 2 2 2 0 Bacteriophage Gp15 protein NodS PF05401.11 ORF143627 - 0.024 14.3 0.0 0.069 12.8 0.0 1.7 2 0 0 2 2 2 0 Nodulation protein S (NodS) RrnaAD PF00398.20 ORF143627 - 0.051 12.6 0.0 0.088 11.9 0.0 1.4 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DUF938 PF06080.12 ORF143627 - 0.15 11.8 0.0 0.38 10.5 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF938) DUF1295 PF06966.12 ORF142083 - 9.2e-11 41.7 0.3 9.2e-11 41.7 0.3 1.7 2 1 0 2 2 2 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF142083 - 6.9e-07 29.6 1.2 6.9e-07 29.6 1.2 2.3 3 0 0 3 3 3 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF142083 - 0.00028 20.9 2.0 0.00028 20.9 2.0 2.8 2 1 1 3 3 3 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF142083 - 0.004 17.5 0.3 0.004 17.5 0.3 2.8 3 0 0 3 3 3 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family RdDM_RDM1 PF09187.10 ORF142083 - 0.11 12.6 0.1 0.23 11.5 0.1 1.5 1 0 0 1 1 1 0 RNA-directed DNA methylation 1 Cytochrom_C1 PF02167.15 ORF136483 - 0.096 12.4 0.3 0.36 10.5 0.3 2.0 1 1 2 3 3 3 0 Cytochrome C1 family AAA_24 PF13479.6 ORF136483 - 0.1 12.3 0.2 0.91 9.2 0.1 2.1 1 1 1 2 2 2 0 AAA domain Ion_trans PF00520.31 ORF131365 - 3.2e-18 65.9 13.7 4.2e-18 65.5 13.7 1.1 1 0 0 1 1 1 1 Ion transport protein Asp5 PF17000.5 ORF131365 - 0.36 11.0 0.0 0.36 11.0 0.0 3.2 4 1 0 4 4 4 0 Accessory secretory protein Sec, Asp5 Peptidase_C1 PF00112.23 ORF127973 - 1.5e-36 126.5 7.1 2e-36 126.1 7.1 1.2 1 0 0 1 1 1 1 Papain family cysteine protease DUF5500 PF17604.2 ORF127973 - 0.0034 17.4 0.1 1.5 9.0 0.0 2.3 2 0 0 2 2 2 2 Family of unknown function (DUF5500) Mito_carr PF00153.27 ORF127841 - 3.1e-24 84.7 6.0 1.3e-17 63.5 0.5 4.0 3 1 1 4 4 4 3 Mitochondrial carrier protein MORN PF02493.20 ORF12732 - 1e-57 188.7 68.9 9.7e-08 31.5 0.6 10.4 10 0 0 10 10 10 10 MORN repeat Tudor_2 PF18104.1 ORF12732 - 5.8 6.7 14.8 9.7 6.0 0.4 5.1 5 0 0 5 5 5 0 Jumonji domain-containing protein 2A Tudor domain Peptidase_C2 PF00648.21 ORF125955 - 1.7e-41 142.2 0.5 3e-41 141.4 0.5 1.4 1 0 0 1 1 1 1 Calpain family cysteine protease EGF PF00008.27 ORF125955 - 0.13 12.6 0.1 0.34 11.3 0.1 1.7 1 0 0 1 1 1 0 EGF-like domain GDP_Man_Dehyd PF16363.5 ORF114899 - 4.2e-88 295.9 0.0 5.1e-88 295.7 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 ORF114899 - 3.5e-62 210.0 0.0 4.6e-62 209.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 ORF114899 - 8.2e-11 41.5 0.0 1.2e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 ORF114899 - 9.9e-09 34.7 0.0 1.6e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 ORF114899 - 1.8e-08 33.9 0.0 2.6e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.19 ORF114899 - 1.5e-07 30.7 0.0 2.6e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RCC1_2 PF13540.6 ORF107147 - 2.5e-07 30.3 8.9 0.072 12.9 0.2 5.3 5 0 0 5 5 5 3 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 ORF107147 - 0.0029 18.1 0.3 11 6.5 0.0 4.4 3 1 2 5 5 5 1 Spectrin repeat Cyclophil_like PF04126.13 ORF107147 - 0.0081 16.0 0.1 0.19 11.5 0.1 2.1 2 0 0 2 2 2 1 Cyclophilin-like PH_TFIIH PF08567.11 ORF107147 - 0.13 12.6 0.9 37 4.7 0.0 3.7 3 1 1 4 4 4 0 TFIIH p62 subunit, N-terminal domain Cerato-platanin PF07249.12 ORF107147 - 0.5 10.5 6.5 6.9 6.8 0.3 3.3 1 1 3 4 4 4 0 Cerato-platanin DUF4687 PF15747.5 ORF107147 - 6.5 7.3 7.9 18 5.8 0.2 3.5 1 1 3 4 4 4 0 Domain of unknown function (DUF4687) Ribosomal_L5 PF00281.19 ORF103225 - 0.31 11.4 1.6 0.43 11.0 0.1 2.0 2 0 0 2 2 2 0 Ribosomal protein L5 dUTPase_2 PF08761.11 ORF103225 - 0.44 10.7 8.5 1.7 8.8 6.5 2.8 1 1 1 2 2 2 0 dUTPase DUF5617 PF18493.1 ORF103225 - 0.91 9.7 5.5 0.27 11.4 0.7 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF5617) zf-ZPR1 PF03367.13 NODE_21475_length_938_cov_64.912514_g16538_i0forward_frame_1 - 1.6e-44 151.6 0.0 2.7e-44 150.8 0.0 1.4 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Auto_anti-p27 PF06677.12 NODE_21475_length_938_cov_64.912514_g16538_i0forward_frame_1 - 8 6.7 6.2 30 4.9 2.0 2.5 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks57.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks57.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks57.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks57.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- adh_short PF00106.25 NODE_21344_length_941_cov_237.572848_g16242_i1reverse_frame_3 - 5.5e-21 74.9 0.0 6.1e-20 71.5 0.0 2.0 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_21344_length_941_cov_237.572848_g16242_i1reverse_frame_3 - 2.6e-12 46.8 0.0 1.4e-11 44.4 0.0 1.9 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase HEAT PF02985.22 NODE_21339_length_941_cov_295.711921_g16417_i0forward_frame_3 - 0.0029 17.7 0.0 0.6 10.5 0.0 2.9 3 0 0 3 3 3 2 HEAT repeat DUF3458_C PF17432.2 NODE_21339_length_941_cov_295.711921_g16417_i0forward_frame_3 - 0.025 14.0 0.6 24 4.2 0.6 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF3458_C) ARM repeats Laminin_G_3 PF13385.6 NODE_21317_length_942_cov_111.496141_g16400_i0forward_frame_3 - 0.00013 22.1 0.1 0.00027 21.1 0.1 1.5 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily VSP PF03302.13 NODE_21317_length_942_cov_111.496141_g16400_i0forward_frame_3 - 8.1 5.2 36.6 0.81 8.5 5.3 2.2 1 1 1 2 2 2 0 Giardia variant-specific surface protein Alpha_kinase PF02816.18 ORF97448 - 1e-33 117.1 0.9 1.7e-33 116.3 0.9 1.3 1 0 0 1 1 1 1 Alpha-kinase family Ribosomal_S7e PF01251.18 ORF97448 - 0.034 13.9 0.0 0.051 13.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein S7e adh_short PF00106.25 ORF94918 - 5.8e-30 104.2 0.0 7.6e-30 103.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF94918 - 8e-20 71.4 0.0 1e-19 71.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF94918 - 2.7e-05 24.1 0.1 5.9e-05 23.0 0.1 1.5 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF94918 - 0.0023 17.5 0.2 0.0037 16.9 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF94918 - 0.012 15.2 0.0 0.028 14.1 0.0 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 ORF94918 - 0.016 15.5 0.2 0.026 14.8 0.2 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF94918 - 0.021 14.6 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Polysacc_synt_2 PF02719.15 ORF94918 - 0.052 12.7 0.0 0.079 12.1 0.0 1.3 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 2-Hacid_dh_C PF02826.19 ORF94918 - 0.056 12.8 0.0 0.084 12.2 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 ORF94918 - 0.072 12.4 0.2 5.1 6.4 0.1 2.2 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF94918 - 0.1 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus zf-C2H2_6 PF13912.6 ORF93581 - 0.099 12.7 1.1 7 6.8 0.0 3.2 2 0 0 2 2 2 0 C2H2-type zinc finger adh_short PF00106.25 ORF9315 - 1.1e-28 100.1 0.0 1.4e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF9315 - 7.8e-19 68.2 0.0 1e-18 67.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF9315 - 6e-05 23.0 0.1 0.00012 22.1 0.1 1.4 1 1 0 1 1 1 1 KR domain ApbA PF02558.16 ORF9315 - 0.0059 16.3 0.0 0.036 13.7 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 ORF9315 - 0.0088 15.6 0.2 0.014 15.0 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF9315 - 0.1 12.9 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ThiF PF00899.21 ORF9315 - 0.19 11.0 0.1 17 4.7 0.1 2.2 1 1 1 2 2 2 0 ThiF family NTP_transf_6 PF06042.11 ORF91321 - 0.0015 18.4 0.2 0.0061 16.4 0.1 2.2 2 0 0 2 2 2 1 Nucleotidyltransferase Uteroglobin PF01099.17 ORF91321 - 0.36 11.2 4.7 0.18 12.1 1.8 2.0 2 0 0 2 2 2 0 Uteroglobin family SCIMP PF15050.6 ORF91321 - 0.41 11.1 8.2 6.9 7.1 0.1 2.5 2 0 0 2 2 2 0 SCIMP protein ARTD15_N PF18084.1 ORF91321 - 5.3 7.4 6.8 0.38 11.0 0.4 2.4 3 0 0 3 3 3 0 ARTD15 N-terminal domain Peptidase_C1 PF00112.23 ORF90053 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease LysM PF01476.20 ORF88822 - 0.00029 20.8 0.0 0.00067 19.7 0.0 1.7 1 0 0 1 1 1 1 LysM domain adh_short PF00106.25 ORF87979 - 8.3e-30 103.7 0.0 1.1e-29 103.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF87979 - 1.1e-19 71.0 0.0 1.4e-19 70.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF87979 - 5.3e-05 23.2 0.1 0.00011 22.2 0.1 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF87979 - 0.0023 17.6 0.2 0.0036 16.9 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF87979 - 0.012 15.2 0.0 0.028 14.1 0.0 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 ORF87979 - 0.022 15.0 0.1 0.039 14.2 0.1 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF87979 - 0.025 14.4 0.0 0.039 13.8 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type NAD_Gly3P_dh_N PF01210.23 ORF87979 - 0.074 13.0 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.19 ORF87979 - 0.081 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 ORF87979 - 0.09 12.1 0.2 6.3 6.1 0.1 2.2 1 1 1 2 2 2 0 ThiF family 3HCDH_N PF02737.18 ORF87979 - 0.18 11.7 0.0 0.31 10.9 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Yip1 PF04893.17 ORF83756 - 0.019 14.7 8.7 0.027 14.2 8.7 1.3 1 1 0 1 1 1 0 Yip1 domain YIF1 PF03878.15 ORF83756 - 0.042 13.4 7.2 0.69 9.4 7.2 2.1 1 1 0 1 1 1 0 YIF1 Dcc1 PF09724.9 ORF83066 - 5e-30 104.9 0.0 6.2e-30 104.6 0.0 1.1 1 0 0 1 1 1 1 Sister chromatid cohesion protein Dcc1 DUF494 PF04361.13 ORF82553 - 0.032 14.1 0.0 0.064 13.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF494) Peptidase_C1 PF00112.23 ORF7962 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease EF-hand_1 PF00036.32 ORF78259 - 6.8e-05 22.1 20.7 0.04 13.5 0.2 5.7 6 0 0 6 6 6 3 EF hand EF-hand_6 PF13405.6 ORF78259 - 0.00011 21.9 14.8 0.017 15.0 0.4 4.4 4 0 0 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF78259 - 0.0018 18.7 27.6 0.036 14.5 8.4 4.0 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF78259 - 0.11 12.3 14.0 1.7 8.6 0.5 5.0 3 3 2 5 5 5 0 EF-hand domain pair Presenilin PF01080.17 ORF78259 - 2.2 6.9 3.4 2.9 6.6 3.4 1.1 1 0 0 1 1 1 0 Presenilin IMUP PF15761.5 ORF75379 - 0.052 14.2 7.0 0.092 13.4 7.0 1.3 1 0 0 1 1 1 0 Immortalisation up-regulated protein FAM104 PF15434.6 ORF75379 - 0.1 13.2 1.9 0.18 12.4 1.9 1.4 1 0 0 1 1 1 0 Family 104 SR-25 PF10500.9 ORF75379 - 2 7.9 6.7 3.1 7.4 6.7 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein AF-4 PF05110.13 ORF75379 - 3 5.8 10.5 3.9 5.4 10.5 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF1275 PF06912.11 ORF75330 - 2.2e-16 60.4 9.5 3.2e-16 59.8 9.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Mersacidin PF16934.5 ORF75330 - 0.11 12.3 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) Proteasome PF00227.26 ORF66555 - 9.3e-46 155.7 0.8 1.1e-45 155.5 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit zf-C2H2 PF00096.26 ORF64851 - 7.4e-13 48.2 20.2 8.5e-06 25.9 2.8 3.8 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF64851 - 1.9e-09 37.5 17.5 6.2e-07 29.6 0.6 4.1 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF64851 - 2.9e-09 37.0 16.6 0.0025 18.5 1.4 3.7 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF64851 - 0.044 13.8 2.9 0.044 13.8 2.9 3.5 3 1 0 3 3 3 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 ORF64851 - 0.1 12.7 4.9 1.8 8.8 0.1 3.4 3 0 0 3 3 3 0 Zinc ribbon domain zf-C2H2_11 PF16622.5 ORF64851 - 0.11 12.2 0.8 0.57 10.0 0.0 2.4 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-met PF12874.7 ORF64851 - 0.13 12.7 11.7 0.27 11.7 1.0 3.7 3 0 0 3 3 3 0 Zinc-finger of C2H2 type PyrI_C PF02748.15 ORF64851 - 0.49 10.4 15.2 0.43 10.5 0.9 3.7 3 1 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-Di19 PF05605.12 ORF64851 - 0.92 9.9 7.4 0.56 10.5 4.3 2.3 2 1 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-BED PF02892.15 ORF64851 - 2.4 8.2 15.7 2.2 8.4 3.0 3.3 1 1 2 3 3 3 0 BED zinc finger zf-H2C2_5 PF13909.6 ORF64851 - 3.6 7.4 23.5 0.77 9.6 4.5 3.2 3 1 0 3 3 3 0 C2H2-type zinc-finger domain zf-C2H2_jaz PF12171.8 ORF64851 - 3.7 7.9 17.2 2.2 8.7 1.5 3.5 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding Ribosomal_L37ae PF01780.19 ORF64851 - 4.7 7.4 7.8 11 6.1 1.0 2.9 1 1 1 2 2 2 0 Ribosomal L37ae protein family zf-AN1 PF01428.16 ORF64851 - 5.1 7.4 11.2 21 5.4 5.0 3.2 1 1 2 3 3 3 0 AN1-like Zinc finger Rpr2 PF04032.16 ORF64851 - 8.1 6.8 9.9 0.73 10.2 0.3 3.3 1 1 2 3 3 3 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Peptidase_C1 PF00112.23 ORF6377 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease AIPR PF10592.9 ORF62730 - 0.0072 16.0 4.8 0.0072 16.0 4.8 1.5 1 1 0 1 1 1 1 AIPR protein Fmp27_SW PF10305.9 ORF62730 - 0.018 15.8 1.3 0.048 14.4 1.3 1.9 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Dynein_AAA_lid PF17852.1 ORF62730 - 0.059 13.5 3.4 2.1 8.4 0.4 3.0 3 0 0 3 3 3 0 Dynein heavy chain AAA lid domain DUF1295 PF06966.12 ORF61703 - 3.2e-44 151.2 8.4 1.9e-39 135.6 6.7 2.1 1 1 0 2 2 2 2 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF61703 - 1e-07 32.1 0.7 1e-07 32.1 0.7 2.2 2 2 1 3 3 3 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 ORF61703 - 4.3e-05 23.9 0.1 0.00022 21.5 0.1 2.3 1 1 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 ORF61703 - 0.0004 20.7 3.2 0.00091 19.6 0.3 2.6 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF996 PF06195.13 ORF61703 - 0.65 10.3 9.7 0.31 11.3 4.5 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF996) PMSR PF01625.21 ORF61591 - 3e-58 196.4 0.4 5.6e-58 195.5 0.4 1.5 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase DUF1275 PF06912.11 ORF61015 - 2.2e-16 60.4 9.5 3.2e-16 59.8 9.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Mersacidin PF16934.5 ORF61015 - 0.11 12.3 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) adh_short PF00106.25 ORF60942 - 3.7e-29 101.6 0.0 4.9e-29 101.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF60942 - 4.3e-20 72.3 0.0 5.7e-20 71.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF60942 - 7.2e-05 22.8 0.1 0.00014 21.8 0.1 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF60942 - 0.0016 18.1 0.3 0.0024 17.5 0.3 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF60942 - 0.0045 16.6 0.0 0.027 14.1 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 ORF60942 - 0.015 15.1 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type DUF3226 PF11536.8 ORF60942 - 0.021 14.5 0.4 0.028 14.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3226) Sacchrp_dh_NADP PF03435.18 ORF60942 - 0.074 13.3 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_Gly3P_dh_N PF01210.23 ORF60942 - 0.079 12.9 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF60942 - 0.091 12.1 0.3 9.4 5.5 0.0 2.2 1 1 1 2 2 2 0 ThiF family 2-Hacid_dh_C PF02826.19 ORF60942 - 0.099 12.0 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 ORF60942 - 0.13 11.3 0.0 0.18 10.9 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein ZZ PF00569.17 ORF60270 - 9.7e-27 92.5 34.9 2.3e-12 46.5 9.2 4.0 3 1 0 3 3 3 3 Zinc finger, ZZ type DDHD PF02862.17 ORF60270 - 0.066 13.4 0.1 0.078 13.1 0.1 1.2 1 0 0 1 1 1 0 DDHD domain DUF2828 PF11443.8 ORF60270 - 0.44 8.6 4.2 0.55 8.3 4.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) DUF4746 PF15928.5 ORF60270 - 1.7 8.0 6.5 2.2 7.6 6.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Presenilin PF01080.17 ORF60270 - 2.1 7.0 6.1 2.6 6.7 6.1 1.1 1 0 0 1 1 1 0 Presenilin RR_TM4-6 PF06459.12 ORF60270 - 8.9 6.0 10.0 12 5.6 10.0 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Peptidase_C1 PF00112.23 ORF565 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Sugar_tr PF00083.24 ORF54551 - 9.3e-58 196.2 8.7 1e-57 196.0 8.7 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter SymE_toxin PF08845.10 ORF54551 - 0.18 11.9 0.1 0.91 9.6 0.0 2.0 2 0 0 2 2 2 0 Toxin SymE, type I toxin-antitoxin system DUF443 PF04276.12 ORF54551 - 0.32 10.8 4.4 0.97 9.2 4.4 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF443) adh_short PF00106.25 ORF5398 - 1.3e-28 99.8 0.0 1.7e-28 99.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF5398 - 3.2e-19 69.4 0.0 4.2e-19 69.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF5398 - 0.00018 21.5 0.1 0.00038 20.4 0.1 1.5 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF5398 - 0.0021 17.6 0.2 0.0033 17.0 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF5398 - 0.0037 16.9 0.0 0.022 14.4 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 ORF5398 - 0.066 13.0 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Sacchrp_dh_NADP PF03435.18 ORF5398 - 0.091 13.0 0.1 0.18 12.1 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_Gly3P_dh_N PF01210.23 ORF5398 - 0.13 12.3 0.1 0.25 11.3 0.1 1.5 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF5398 - 0.21 10.9 0.1 17 4.6 0.1 2.2 1 1 1 2 2 2 0 ThiF family Peptidase_C1 PF00112.23 ORF50718 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease adh_short PF00106.25 ORF50048 - 1e-28 100.1 0.0 1.4e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF50048 - 6.9e-20 71.6 0.0 9e-20 71.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF50048 - 6.3e-05 23.0 0.1 0.00012 22.0 0.1 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF50048 - 0.00074 19.1 0.2 0.0011 18.5 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF50048 - 0.002 17.8 0.0 0.012 15.2 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 ORF50048 - 0.011 15.6 0.0 0.017 14.9 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type DUF1776 PF08643.10 ORF50048 - 0.037 13.4 0.1 0.063 12.6 0.1 1.3 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) NAD_Gly3P_dh_N PF01210.23 ORF50048 - 0.039 13.9 0.0 0.071 13.1 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF50048 - 0.046 13.1 0.3 4.6 6.5 0.0 2.2 1 1 1 2 2 2 0 ThiF family Sacchrp_dh_NADP PF03435.18 ORF50048 - 0.093 13.0 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Polysacc_synt_2 PF02719.15 ORF50048 - 0.1 11.7 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein LytR_C PF13399.6 ORF50048 - 0.14 13.1 0.0 0.27 12.3 0.0 1.4 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator EF-hand_1 PF00036.32 ORF50042 - 6.8e-05 22.1 20.7 0.04 13.5 0.2 5.7 6 0 0 6 6 6 3 EF hand EF-hand_6 PF13405.6 ORF50042 - 0.00011 21.9 14.8 0.017 15.0 0.4 4.4 4 0 0 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF50042 - 0.0018 18.7 27.6 0.036 14.5 8.4 4.0 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF50042 - 0.11 12.3 14.0 1.7 8.6 0.5 5.0 3 3 2 5 5 5 0 EF-hand domain pair Presenilin PF01080.17 ORF50042 - 2.2 6.9 3.4 2.9 6.6 3.4 1.1 1 0 0 1 1 1 0 Presenilin Peptidase_C1 PF00112.23 ORF4874 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF46880 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease SUI1 PF01253.22 ORF46487 - 9.3e-16 58.1 0.3 2.4e-15 56.8 0.3 1.7 1 0 0 1 1 1 1 Translation initiation factor SUI1 adh_short PF00106.25 ORF45690 - 6e-29 100.9 0.0 7.8e-29 100.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF45690 - 5e-20 72.1 0.0 6.5e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF45690 - 5.4e-05 23.2 0.0 0.00011 22.2 0.0 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF45690 - 0.0018 17.9 0.3 0.0028 17.2 0.3 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF45690 - 0.0041 16.8 0.0 0.024 14.3 0.0 2.1 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA GxDLY PF14607.6 ORF45690 - 0.013 15.3 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Sacchrp_dh_NADP PF03435.18 ORF45690 - 0.013 15.8 0.1 0.022 15.0 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DUF3226 PF11536.8 ORF45690 - 0.023 14.4 0.4 0.032 13.9 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3226) DUF1776 PF08643.10 ORF45690 - 0.024 14.0 0.4 0.043 13.2 0.4 1.4 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) 2-Hacid_dh_C PF02826.19 ORF45690 - 0.036 13.4 0.0 0.056 12.8 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 ORF45690 - 0.051 12.7 0.0 0.066 12.3 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein ThiF PF00899.21 ORF45690 - 0.07 12.5 0.3 5.3 6.3 0.1 2.2 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF45690 - 0.11 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Asp PF00026.23 ORF4481 - 4.6e-06 26.3 0.8 1.2e-05 24.9 0.8 1.7 1 1 0 1 1 1 1 Eukaryotic aspartyl protease Asp PF00026.23 ORF44273 - 4.6e-06 26.3 0.8 1.2e-05 24.9 0.8 1.7 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TMEMspv1-c74-12 PF11044.8 ORF42258 - 0.047 13.7 0.7 0.18 11.8 0.7 2.0 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein DUF2358 PF10184.9 ORF42258 - 0.63 10.3 5.7 0.39 11.0 3.4 2.0 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2358) adh_short PF00106.25 ORF40534 - 1.2e-29 103.2 0.0 1.5e-29 102.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF40534 - 6.1e-20 71.8 0.0 7.7e-20 71.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF40534 - 8.4e-05 22.5 0.0 0.00017 21.5 0.0 1.5 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF40534 - 0.0022 17.6 0.2 0.0037 16.9 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF40534 - 0.011 15.3 0.0 0.028 14.0 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 ORF40534 - 0.016 15.5 0.2 0.026 14.8 0.2 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF40534 - 0.025 14.4 0.0 0.039 13.7 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Polysacc_synt_2 PF02719.15 ORF40534 - 0.055 12.6 0.0 0.08 12.1 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 2-Hacid_dh_C PF02826.19 ORF40534 - 0.057 12.8 0.0 0.084 12.2 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 ORF40534 - 0.072 12.4 0.2 5.1 6.4 0.1 2.2 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF40534 - 0.091 12.7 0.0 0.2 11.6 0.0 1.6 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DUF2989 PF11207.8 ORF38185 - 0.044 13.6 0.1 0.068 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2989) Peptidase_C1 PF00112.23 ORF36680 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF36205 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF3593 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease adh_short PF00106.25 ORF35781 - 1.7e-28 99.4 0.0 2.3e-28 99.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF35781 - 5.7e-19 68.6 0.0 7.5e-19 68.2 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF35781 - 6.9e-05 22.8 0.1 0.00014 21.8 0.1 1.4 1 1 0 1 1 1 1 KR domain ApbA PF02558.16 ORF35781 - 0.0026 17.4 0.0 0.016 14.9 0.0 2.2 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 ORF35781 - 0.0029 17.2 0.3 0.0045 16.6 0.3 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF35781 - 0.044 14.0 0.1 0.082 13.2 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF35781 - 0.055 13.3 0.0 0.088 12.6 0.0 1.2 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type ThiF PF00899.21 ORF35781 - 0.09 12.1 0.1 9.3 5.5 0.1 2.2 1 1 1 2 2 2 0 ThiF family 2-Hacid_dh_C PF02826.19 ORF35781 - 0.099 12.0 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Peptidase_C1 PF00112.23 ORF30810 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF29565 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF21886 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Asp PF00026.23 ORF21098 - 4.6e-06 26.3 0.8 1.2e-05 24.9 0.8 1.7 1 1 0 1 1 1 1 Eukaryotic aspartyl protease DUF1275 PF06912.11 ORF18666 - 2.2e-16 60.4 9.5 3.2e-16 59.8 9.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Mersacidin PF16934.5 ORF18666 - 0.11 12.3 0.1 0.2 11.4 0.1 1.4 1 0 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) Peptidase_C1 PF00112.23 ORF16128 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF149436 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease MFS_1 PF07690.16 ORF146649 - 2.4e-16 59.6 9.2 3.1e-16 59.3 9.2 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF1627 PF07789.12 ORF14634 - 0.08 12.6 0.8 0.18 11.5 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1627) DUF2989 PF11207.8 ORF14359 - 0.044 13.6 0.1 0.068 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2989) Peptidase_C1 PF00112.23 ORF138155 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease UPF0183 PF03676.14 ORF136038 - 4.1e-52 177.8 0.0 1.8e-50 172.4 0.0 2.0 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0183) Nucleoside_tran PF01733.18 ORF136038 - 0.06 12.7 0.2 0.088 12.2 0.2 1.1 1 0 0 1 1 1 0 Nucleoside transporter Pkinase PF00069.25 ORF131898 - 3.2e-28 98.9 0.0 3.9e-28 98.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF131898 - 3.7e-18 65.7 0.0 4.7e-18 65.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF131898 - 2.2e-08 33.3 0.0 2.9e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF131898 - 3.4e-05 23.9 0.0 0.00037 20.5 0.0 2.2 2 0 0 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF131898 - 0.01 15.2 0.0 0.018 14.4 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Proteasome PF00227.26 ORF119110 - 9.3e-46 155.7 0.8 1.1e-45 155.5 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit adh_short PF00106.25 ORF119096 - 5.8e-30 104.2 0.0 7.6e-30 103.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF119096 - 1.1e-19 70.9 0.0 1.5e-19 70.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF119096 - 3e-05 24.0 0.1 5.9e-05 23.0 0.1 1.4 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF119096 - 0.0023 17.5 0.2 0.0037 16.9 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF119096 - 0.012 15.3 0.0 0.026 14.2 0.0 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 ORF119096 - 0.015 15.5 0.2 0.026 14.8 0.2 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GxDLY PF14607.6 ORF119096 - 0.022 14.5 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 N-terminus of Esterase_SGNH_hydro-type Polysacc_synt_2 PF02719.15 ORF119096 - 0.055 12.6 0.0 0.079 12.1 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 2-Hacid_dh_C PF02826.19 ORF119096 - 0.064 12.6 0.0 0.097 12.0 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.21 ORF119096 - 0.072 12.4 0.2 5.1 6.4 0.1 2.2 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF119096 - 0.1 12.6 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Bax1-I PF01027.20 ORF117309 - 1.8e-28 99.8 34.1 2.7e-28 99.2 34.1 1.3 1 1 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF1295 PF06966.12 ORF114456 - 3.2e-44 151.2 8.4 1.9e-39 135.6 6.7 2.1 1 1 0 2 2 2 2 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF114456 - 1e-07 32.1 0.7 1e-07 32.1 0.7 2.2 2 2 1 3 3 3 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 ORF114456 - 4.3e-05 23.9 0.1 0.00022 21.5 0.1 2.3 1 1 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 ORF114456 - 0.0004 20.7 3.2 0.00091 19.6 0.3 2.6 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DUF996 PF06195.13 ORF114456 - 0.65 10.3 9.7 0.31 11.3 4.5 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF996) Pkinase PF00069.25 ORF112718 - 2.4e-64 217.3 0.2 2.9e-64 217.0 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF112718 - 5.3e-44 150.5 0.0 6.7e-44 150.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF112718 - 1.7e-07 30.8 0.0 5.5e-06 25.9 0.0 2.3 2 0 0 2 2 2 1 Kinase-like IFT57 PF10498.9 ORF112718 - 0.002 17.2 0.8 0.0028 16.7 0.8 1.2 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Pkinase_fungal PF17667.1 ORF112718 - 0.0042 15.9 0.0 0.0074 15.1 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF112718 - 0.0082 15.5 0.0 0.014 14.8 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF112718 - 0.014 15.4 0.0 0.021 14.8 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF112718 - 0.024 13.6 0.1 0.047 12.6 0.1 1.6 1 1 0 1 1 1 0 Haspin like kinase domain EF-hand_1 PF00036.32 ORF110681 - 6.8e-05 22.1 20.7 0.04 13.5 0.2 5.7 6 0 0 6 6 6 3 EF hand EF-hand_6 PF13405.6 ORF110681 - 0.00011 21.9 14.8 0.017 15.0 0.4 4.4 4 0 0 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 ORF110681 - 0.0018 18.7 27.6 0.036 14.5 8.4 4.0 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF110681 - 0.11 12.3 14.0 1.7 8.6 0.5 5.0 3 3 2 5 5 5 0 EF-hand domain pair Presenilin PF01080.17 ORF110681 - 2.2 6.9 3.4 2.9 6.6 3.4 1.1 1 0 0 1 1 1 0 Presenilin Peptidase_C1 PF00112.23 ORF103751 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1 PF00112.23 ORF100820 - 2.5e-50 171.6 3.2 3e-50 171.3 3.2 1.1 1 0 0 1 1 1 1 Papain family cysteine protease DUF3649 PF12365.8 NODE_21542_length_936_cov_6.590455_g16592_i0reverse_frame_1 - 0.17 11.6 3.4 3.9 7.3 0.1 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3649) ABC2_membrane_3 PF12698.7 NODE_21433_length_939_cov_76.539823_g16501_i0forward_frame_2 - 1.1 8.3 4.2 1.5 7.8 4.2 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein HATPase_c PF02518.26 NODE_21427_length_939_cov_105.189159_g13840_i1reverse_frame_2 - 1.1e-10 41.9 0.0 1.6e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCDHK_Adom3 PF10436.9 NODE_21427_length_939_cov_105.189159_g13840_i1reverse_frame_2 - 0.0009 19.1 0.0 0.0016 18.3 0.0 1.4 1 0 0 1 1 1 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase HATPase_c_3 PF13589.6 NODE_21427_length_939_cov_105.189159_g13840_i1reverse_frame_2 - 0.02 14.7 0.0 0.033 14.0 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Coatomer_g_Cpla PF16381.5 ORF99684 - 0.13 12.4 0.6 0.23 11.6 0.6 1.3 1 0 0 1 1 1 0 Coatomer subunit gamma-1 C-terminal appendage platform Mg_trans_NIPA PF05653.14 ORF98484 - 4.2e-07 29.4 0.9 4.2e-07 29.4 0.9 2.1 2 0 0 2 2 2 1 Magnesium transporter NIPA Ly49 PF08391.10 ORF98484 - 0.12 12.7 2.4 0.59 10.5 0.1 2.7 3 0 0 3 3 3 0 Ly49-like protein, N-terminal region TssO PF17561.2 ORF98484 - 0.13 12.4 10.4 2.1 8.4 0.1 3.9 2 2 1 3 3 3 0 Type VI secretion system, TssO Pox_A28 PF04584.14 ORF98484 - 0.25 11.5 2.6 0.3 11.3 0.1 2.4 2 0 0 2 2 2 0 Poxvirus A28 family ECF_trnsprt PF12822.7 ORF98484 - 0.39 10.8 16.9 4.7 7.3 14.6 2.8 1 1 2 3 3 3 0 ECF transporter, substrate-specific component DUF3899 PF13038.6 ORF98484 - 1.7 9.2 7.1 1.2 9.6 0.5 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF3899) MerC PF03203.14 ORF98484 - 1.9 9.0 6.9 0.53 10.8 1.0 2.6 2 1 0 2 2 2 0 MerC mercury resistance protein DUF3671 PF12420.8 ORF98484 - 4.7 7.3 18.2 0.34 11.0 5.3 3.5 2 1 1 4 4 4 0 Protein of unknown function HEAT PF02985.22 ORF95629 - 0.021 15.0 0.3 0.9 10.0 0.0 2.7 2 0 0 2 2 2 0 HEAT repeat TAF6_C PF07571.13 ORF95629 - 0.11 12.8 0.1 0.24 11.7 0.1 1.6 1 0 0 1 1 1 0 TAF6 C-terminal HEAT repeat domain YafQ_toxin PF15738.5 ORF9475 - 0.094 13.0 1.4 0.17 12.2 0.2 2.2 2 0 0 2 2 2 0 Bacterial toxin of type II toxin-antitoxin system, YafQ DUF1283 PF06932.11 ORF9475 - 0.31 11.3 0.2 0.31 11.3 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1283) DnaI_N PF07319.11 ORF9475 - 0.84 10.4 7.8 6 7.6 0.1 3.4 3 1 0 4 4 4 0 Primosomal protein DnaI N-terminus ERO1 PF04137.15 ORF88275 - 1.9e-64 218.1 2.9 2.6e-64 217.6 2.9 1.1 1 0 0 1 1 1 1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) ATP-synt_J PF04911.12 ORF88275 - 0.18 11.4 0.0 0.38 10.4 0.0 1.5 1 0 0 1 1 1 0 ATP synthase j chain Methyltransf_11 PF08241.12 ORF85598 - 6e-10 39.6 0.0 8e-09 36.0 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF85598 - 1.3e-07 32.2 0.0 0.001 19.7 0.0 2.6 1 1 1 2 2 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 ORF85598 - 2e-06 27.8 0.0 3e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF85598 - 6.5e-06 25.7 0.0 0.00022 20.7 0.0 2.8 2 1 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF85598 - 0.0011 19.7 0.0 0.0055 17.4 0.0 2.2 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_8 PF05148.15 ORF85598 - 0.0033 17.3 0.0 0.012 15.5 0.0 1.8 2 0 0 2 2 2 1 Hypothetical methyltransferase Methyltransf_31 PF13847.6 ORF85598 - 0.018 14.9 0.0 0.4 10.5 0.0 2.3 2 0 0 2 2 2 0 Methyltransferase domain SAS4 PF15460.6 ORF8438 - 0.11 12.6 5.9 0.26 11.4 5.9 1.8 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 DUF1505 PF07403.11 ORF8438 - 1.1 9.4 7.2 0.59 10.3 4.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1505) Pkinase PF00069.25 ORF79854 - 8e-62 209.0 0.2 1e-61 208.6 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF79854 - 1.6e-27 96.4 0.0 2.3e-27 95.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF79854 - 1.7e-05 24.0 0.4 2.5e-05 23.4 0.4 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF79854 - 0.00039 19.8 0.0 0.00072 19.0 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF79854 - 0.0015 18.5 0.0 0.061 13.2 0.0 2.2 2 0 0 2 2 2 1 Phosphotransferase enzyme family RIO1 PF01163.22 ORF79854 - 0.0024 17.5 0.3 0.005 16.5 0.3 1.6 1 1 0 1 1 1 1 RIO1 family FTA2 PF13095.6 ORF79854 - 0.0046 16.6 0.1 0.013 15.2 0.1 1.8 1 1 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF79854 - 0.0057 16.0 0.0 0.039 13.3 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF79854 - 0.016 14.0 0.1 0.1 11.4 0.0 1.9 2 0 0 2 2 2 0 Fungal protein kinase YrbL-PhoP_reg PF10707.9 ORF79854 - 0.032 13.8 0.2 0.11 12.0 0.0 1.9 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL Multi-haem_cyto PF13447.6 ORF79854 - 0.15 11.3 0.1 0.2 10.9 0.1 1.2 1 0 0 1 1 1 0 Seven times multi-haem cytochrome CxxCH Metallophos PF00149.28 ORF78599 - 9.8e-37 127.4 1.3 1.4e-36 126.9 1.3 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF78599 - 0.00031 21.1 0.1 0.00067 20.0 0.1 1.6 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Glyco_hydro_65N PF03636.15 ORF78599 - 0.071 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain DUF5378 PF17349.2 ORF78599 - 0.2 10.9 0.0 0.29 10.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5378) Jacalin PF01419.17 ORF63264 - 0.00051 20.0 0.0 0.00096 19.1 0.0 1.4 1 0 0 1 1 1 1 Jacalin-like lectin domain IL7 PF01415.16 ORF63264 - 0.16 12.0 5.1 0.59 10.2 5.0 2.0 2 1 0 2 2 2 0 Interleukin 7/9 family GpcrRhopsn4 PF10192.9 ORF62880 - 1.7e-24 86.7 4.0 1.9e-24 86.4 4.0 1.0 1 0 0 1 1 1 1 Rhodopsin-like GPCR transmembrane domain DUF1003 PF06210.11 ORF62880 - 0.29 11.2 0.1 0.29 11.2 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1003) Ribosomal_S20p PF01649.18 ORF57942 - 5.7e-12 46.1 1.5 1.1e-11 45.2 1.5 1.4 1 0 0 1 1 1 1 Ribosomal protein S20 DS PF01916.17 ORF57942 - 0.17 11.1 0.1 0.24 10.6 0.1 1.1 1 0 0 1 1 1 0 Deoxyhypusine synthase Bax1-I PF01027.20 ORF50213 - 3.2e-37 128.4 28.9 3.8e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF50213 - 1.9 9.3 17.3 2.7 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF50213 - 2.7 8.1 8.0 7.2 6.7 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) Auto_anti-p27 PF06677.12 ORF48479 - 3.8 7.7 11.0 7 6.9 0.1 4.6 5 0 0 5 5 5 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C2H2 PF00096.26 ORF47192 - 4.1e-15 55.3 17.6 7.3e-06 26.2 0.7 3.7 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF47192 - 5.6e-10 39.2 18.5 3.7e-08 33.4 0.3 4.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF47192 - 2.8e-09 37.0 15.4 0.004 17.9 0.4 3.9 3 0 0 3 3 3 3 C2H2-type zinc finger zf-BED PF02892.15 ORF47192 - 5.6e-05 23.1 14.8 0.0014 18.6 2.7 3.0 2 1 1 3 3 2 2 BED zinc finger zf-C2H2_11 PF16622.5 ORF47192 - 0.00024 20.8 2.8 0.05 13.4 0.2 2.8 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-Di19 PF05605.12 ORF47192 - 0.00039 20.7 2.1 0.00039 20.7 2.1 2.1 3 0 0 3 3 2 1 Drought induced 19 protein (Di19), zinc-binding Zn-ribbon_8 PF09723.10 ORF47192 - 0.052 13.7 1.2 0.16 12.1 0.1 2.3 1 1 1 2 2 2 0 Zinc ribbon domain zf-H2C2_5 PF13909.6 ORF47192 - 0.1 12.4 11.7 12 5.8 0.5 4.2 3 1 0 3 3 3 0 C2H2-type zinc-finger domain GAGA PF09237.11 ORF47192 - 0.11 12.3 0.8 4.5 7.2 0.0 3.0 1 1 2 3 3 3 0 GAGA factor zf-C2H2_8 PF15909.5 ORF47192 - 0.24 11.7 8.3 0.049 13.9 3.8 2.2 2 1 1 3 3 3 0 C2H2-type zinc ribbon zf-LYAR PF08790.11 ORF47192 - 0.24 11.3 6.9 2.3 8.2 0.1 3.9 4 0 0 4 4 4 0 LYAR-type C2HC zinc finger Rpr2 PF04032.16 ORF47192 - 0.26 11.6 6.5 12 6.2 6.5 3.2 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-RING_5 PF14634.6 ORF47192 - 0.46 10.5 7.0 4.3 7.4 2.8 3.2 2 1 1 3 3 3 0 zinc-RING finger domain zf-met PF12874.7 ORF47192 - 0.67 10.4 7.1 12 6.4 0.2 3.6 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zinc_ribbon_15 PF17032.5 ORF47192 - 2.2 9.1 11.9 0.1 13.4 1.6 3.1 3 1 1 4 4 4 0 zinc-ribbon family zf-CHY PF05495.12 ORF47192 - 2.9 8.4 8.4 4.6 7.8 5.7 2.7 2 1 0 2 2 2 0 CHY zinc finger FYVE PF01363.21 ORF47192 - 3 8.0 7.7 4.3 7.6 0.2 2.8 1 1 1 2 2 2 0 FYVE zinc finger FhuF PF06276.12 ORF42841 - 2.6e-30 106.0 0.7 2.6e-30 106.0 0.7 1.6 2 0 0 2 2 2 1 Ferric iron reductase FhuF-like transporter FhuF_C PF11575.8 ORF42841 - 1.2e-07 31.5 6.7 2.8e-07 30.3 6.7 1.7 1 0 0 1 1 1 1 FhuF 2Fe-2S C-terminal domain TauD PF02668.16 ORF34606 - 1.9e-37 129.5 0.1 2.4e-37 129.2 0.1 1.1 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family EF-hand_1 PF00036.32 ORF33590 - 7.5e-14 50.2 0.0 0.013 15.1 0.0 4.8 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 ORF33590 - 1.9e-12 46.0 0.1 0.067 13.2 0.1 5.4 5 0 0 5 5 5 4 EF-hand domain EF-hand_8 PF13833.6 ORF33590 - 1.4e-09 37.7 0.0 0.00022 21.0 0.0 4.4 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_7 PF13499.6 ORF33590 - 3.6e-09 36.9 0.0 0.0011 19.3 0.0 3.5 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF33590 - 1.4e-08 33.8 0.0 0.035 13.6 0.0 3.6 3 0 0 3 3 3 3 EF hand UPF0121 PF03661.13 ORF33142 - 1.5e-15 57.2 4.3 2.7e-15 56.4 4.3 1.3 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0121) PI3_PI4_kinase PF00454.27 ORF30454 - 3.3e-32 112.3 1.0 3e-29 102.6 1.0 2.1 1 1 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 ORF30454 - 0.00038 19.9 0.0 0.0016 17.9 0.0 1.8 1 1 1 2 2 2 1 Domain of unknown function (DUF4135) Hydrolase_4 PF12146.8 ORF2668 - 3e-05 23.4 0.0 0.0099 15.2 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF2668 - 0.0031 17.2 0.8 0.0094 15.6 0.8 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold LIP PF03583.14 ORF2668 - 0.11 11.7 0.0 0.2 10.9 0.0 1.3 1 0 0 1 1 1 0 Secretory lipase DHHC PF01529.20 ORF2540 - 2.2e-31 108.7 6.0 2.2e-31 108.7 6.0 1.9 2 0 0 2 2 2 1 DHHC palmitoyltransferase Spt4 PF06093.13 ORF2540 - 0.19 11.8 2.3 0.45 10.7 2.3 1.6 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger LapA_dom PF06305.11 ORF2540 - 1.7 8.6 6.0 4.3 7.2 0.1 3.0 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain zf-B_box PF00643.24 ORF22317 - 0.0024 18.0 7.9 0.0024 18.0 7.9 3.1 3 0 0 3 3 3 1 B-box zinc finger PHD PF00628.29 ORF22317 - 0.0049 16.7 3.7 0.0049 16.7 3.7 2.2 2 0 0 2 2 2 1 PHD-finger PHD_2 PF13831.6 ORF22317 - 0.015 14.8 1.6 0.04 13.5 1.6 1.7 1 0 0 1 1 1 0 PHD-finger DivIC PF04977.15 ORF22317 - 0.026 14.3 3.2 0.026 14.3 3.2 3.3 1 1 2 3 3 3 0 Septum formation initiator SlyX PF04102.12 ORF22317 - 2.2 9.0 16.3 9.4 6.9 9.5 3.7 2 1 2 4 4 4 0 SlyX ZYG-11_interact PF05884.12 ORF22317 - 2.6 7.4 4.8 4.8 6.5 4.8 1.5 1 1 0 1 1 1 0 Interactor of ZYG-11 DUF1690 PF07956.11 ORF22317 - 2.9 8.3 25.5 0.25 11.7 16.4 2.3 1 1 1 2 2 2 0 Protein of Unknown function (DUF1690) ATG16 PF08614.11 ORF22317 - 3.6 7.8 26.9 1.6 8.9 23.7 1.8 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) Fez1 PF06818.15 ORF22317 - 4.2 7.8 28.8 0.91 9.9 19.5 2.1 1 1 1 2 2 2 0 Fez1 HSCB_C PF07743.13 ORF22317 - 4.6 7.8 17.9 1.1e+04 -3.1 17.9 3.1 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain CPSF_A PF03178.15 ORF20059 - 0.00064 19.1 0.3 0.82 8.9 0.2 2.5 1 1 2 3 3 3 2 CPSF A subunit region CNH PF00780.22 ORF20059 - 0.03 13.9 0.5 0.23 11.0 0.5 2.2 1 1 0 1 1 1 0 CNH domain WD40 PF00400.32 ORF20059 - 0.035 15.0 0.0 9.3 7.3 0.1 3.1 3 0 0 3 3 3 0 WD domain, G-beta repeat Pkinase PF00069.25 ORF18168 - 5.7e-61 206.2 0.0 6.5e-61 206.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF18168 - 7.5e-29 100.8 0.0 9e-29 100.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_C PF00433.24 ORF18168 - 0.00056 20.6 0.2 0.0013 19.4 0.2 1.6 1 1 0 1 1 1 1 Protein kinase C terminal domain Kinase-like PF14531.6 ORF18168 - 0.089 12.1 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Pkinase_fungal PF17667.1 ORF18168 - 0.1 11.4 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Kelch_4 PF13418.6 ORF146616 - 1.5e-31 108.1 14.0 8.9e-10 38.4 0.0 5.7 5 1 0 5 5 5 5 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF146616 - 3.8e-26 90.6 2.0 8.2e-06 25.7 0.2 5.5 5 1 0 5 5 5 5 Kelch motif Kelch_6 PF13964.6 ORF146616 - 2.2e-25 88.1 6.7 5.3e-07 29.7 0.1 5.3 5 0 0 5 5 5 5 Kelch motif Kelch_1 PF01344.25 ORF146616 - 6.7e-24 83.2 4.8 1.4e-09 37.4 0.3 4.6 4 0 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 ORF146616 - 9.8e-24 82.4 6.4 1.7e-07 30.9 0.1 5.4 5 0 0 5 5 5 4 Kelch motif Kelch_3 PF13415.6 ORF146616 - 8.3e-23 80.2 8.1 1.8e-07 31.2 0.0 5.9 6 0 0 6 6 6 5 Galactose oxidase, central domain Period_C PF12114.8 ORF146616 - 0.018 14.7 0.0 0.031 13.8 0.0 1.4 1 0 0 1 1 1 0 Period protein 2/3C-terminal region DUF4091 PF13320.6 ORF146616 - 0.084 13.0 0.1 4.9 7.4 0.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4091) zf-RING_2 PF13639.6 ORF142920 - 2.6e-11 43.7 2.6 7e-11 42.3 2.6 1.8 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF142920 - 5.9e-09 36.1 4.6 3.8e-08 33.5 4.6 2.2 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF142920 - 1.4e-07 31.2 2.6 3.6e-07 29.9 2.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF142920 - 3.3e-07 29.9 2.4 9.4e-07 28.5 2.4 1.8 1 0 0 1 1 1 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF142920 - 9.6e-07 28.3 0.9 2.7e-06 26.9 0.9 1.7 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 ORF142920 - 1.9e-06 27.8 4.2 4.5e-06 26.6 4.2 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF142920 - 2.4e-06 27.5 0.2 4.3e-06 26.7 0.2 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF142920 - 2.2e-05 24.3 1.0 5.9e-05 22.9 1.0 1.8 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF142920 - 8.9e-05 22.3 5.7 0.00044 20.0 5.8 2.1 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF142920 - 0.00019 21.2 1.3 0.0011 18.8 1.4 2.1 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF142920 - 0.00075 19.3 5.0 0.0038 17.0 0.3 2.4 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 Rtf2 PF04641.12 ORF142920 - 0.0045 16.4 0.2 0.0045 16.4 0.2 1.7 2 0 0 2 2 2 1 Rtf2 RING-finger FANCL_C PF11793.8 ORF142920 - 0.014 15.5 1.6 0.041 14.1 1.6 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 ORF142920 - 0.023 14.8 3.2 0.08 13.1 3.2 2.0 1 1 1 2 2 2 0 RING-variant domain Trypan_PARP PF05887.11 ORF142920 - 0.18 11.8 0.0 0.35 10.9 0.0 1.4 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) zf-RING-like PF08746.11 ORF142920 - 0.25 11.7 0.3 0.25 11.7 0.3 1.9 2 0 0 2 2 2 0 RING-like domain zf-C3HC4_4 PF15227.6 ORF142920 - 0.46 10.7 7.9 0.088 13.0 2.4 2.6 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING PalH PF08733.10 ORF142920 - 0.62 9.0 17.5 1.1 8.2 17.6 1.4 1 1 0 1 1 1 0 PalH/RIM21 zf-Nse PF11789.8 ORF142920 - 1 9.3 7.8 0.082 12.7 2.0 2.2 2 1 1 3 3 2 0 Zinc-finger of the MIZ type in Nse subunit OppC_N PF12911.7 ORF142920 - 2.2 8.3 0.0 2.2 8.3 0.0 3.4 3 1 0 3 3 2 0 N-terminal TM domain of oligopeptide transport permease C Sensor PF13796.6 ORF142920 - 8.8 6.4 8.5 21 5.2 8.5 1.6 1 1 0 1 1 1 0 Putative sensor ATG16 PF08614.11 ORF142261 - 0.0016 18.7 6.1 0.0016 18.7 6.1 3.0 3 0 0 3 3 3 2 Autophagy protein 16 (ATG16) ERM PF00769.19 ORF142261 - 0.017 15.0 19.2 0.096 12.5 19.2 1.9 1 1 1 2 2 2 0 Ezrin/radixin/moesin family GAS2 PF02187.17 ORF142261 - 0.029 14.5 0.0 0.063 13.4 0.0 1.6 1 0 0 1 1 1 0 Growth-Arrest-Specific Protein 2 Domain TolA_bind_tri PF16331.5 ORF142261 - 0.13 12.3 11.7 1.3 9.2 3.1 3.6 2 1 1 3 3 3 0 TolA binding protein trimerisation Wtap PF17098.5 ORF142261 - 0.36 10.8 11.7 4.1 7.3 11.7 2.5 1 1 0 1 1 1 0 WTAP/Mum2p family Spc7 PF08317.11 ORF142261 - 3.1 6.6 22.6 0.9 8.4 17.3 2.4 2 1 0 2 2 2 0 Spc7 kinetochore protein DUF4200 PF13863.6 ORF142261 - 3.3 8.1 23.1 0.041 14.3 6.9 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) HAUS6_N PF14661.6 ORF142261 - 4.4 6.8 10.7 2.3 7.7 6.2 2.4 2 1 0 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus DUF1192 PF06698.11 ORF142261 - 6.3 6.9 11.8 0.72 10.0 0.7 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1192) Tropomyosin_1 PF12718.7 ORF142261 - 7.2 6.8 26.4 0.19 11.9 5.6 2.8 2 1 1 3 3 3 0 Tropomyosin like CARD PF00619.21 ORF134774 - 0.021 14.8 0.4 0.048 13.7 0.4 1.6 1 0 0 1 1 1 0 Caspase recruitment domain CHDCT2 PF08074.11 ORF134774 - 0.098 12.8 1.5 0.13 12.4 0.3 1.7 2 0 0 2 2 2 0 CHDCT2 (NUC038) domain PSI_PsaF PF02507.15 ORF12893 - 4.3e-41 140.6 0.1 7.7e-41 139.8 0.1 1.4 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF12893 - 0.14 12.2 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein zf-RING_2 PF13639.6 ORF124894 - 1.7e-12 47.4 6.8 3e-12 46.7 6.8 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF124894 - 1.7e-08 34.1 6.4 3.2e-08 33.3 6.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF124894 - 5.1e-08 33.1 7.9 2.2e-07 31.0 7.9 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF124894 - 3.1e-06 26.8 2.7 6.7e-06 25.7 2.7 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF124894 - 5.6e-06 26.3 3.0 1.3e-05 25.1 3.0 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF124894 - 8.8e-06 25.5 5.3 1.5e-05 24.8 5.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF124894 - 0.00013 21.8 7.1 0.00025 20.9 7.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF124894 - 0.00016 21.6 5.6 0.00028 20.8 5.6 1.4 1 0 0 1 1 1 1 zinc-RING finger domain SPC25 PF06703.11 ORF124894 - 0.00085 19.1 0.1 0.0016 18.3 0.1 1.5 1 0 0 1 1 1 1 Microsomal signal peptidase 25 kDa subunit (SPC25) zf-ANAPC11 PF12861.7 ORF124894 - 0.003 17.6 3.7 0.0065 16.5 3.7 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF124894 - 0.0042 16.9 5.5 0.012 15.4 5.5 1.8 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF124894 - 0.0073 16.4 6.5 0.016 15.3 6.5 1.6 1 0 0 1 1 1 1 RING-variant domain Zn_ribbon_17 PF17120.5 ORF124894 - 0.014 15.0 3.3 0.028 14.1 3.3 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF124894 - 0.043 14.0 6.6 0.34 11.1 6.6 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3HC4_4 PF15227.6 ORF124894 - 0.046 13.9 5.2 0.11 12.7 5.2 1.7 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3H2C3 PF17122.5 ORF124894 - 0.17 12.0 3.3 0.48 10.5 3.3 1.8 1 0 0 1 1 1 0 Zinc-finger zf-RING_10 PF16685.5 ORF124894 - 0.21 11.7 2.9 0.71 10.1 2.9 1.8 1 0 0 1 1 1 0 zinc RING finger of MSL2 GWT1 PF06423.12 ORF124894 - 0.3 11.2 1.5 0.51 10.5 0.2 1.9 2 0 0 2 2 2 0 GWT1 zf-RING_4 PF14570.6 ORF124894 - 0.67 9.8 4.7 1.5 8.7 4.7 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Tmpp129 PF10272.9 ORF124894 - 6 6.1 10.5 0.31 10.3 2.6 2.4 2 1 1 3 3 3 0 Putative transmembrane protein precursor Lipase_3 PF01764.25 ORF124764 - 2.7e-28 98.6 0.0 4.7e-28 97.8 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Peptidase_S9 PF00326.21 ORF124764 - 0.015 14.7 0.0 0.023 14.2 0.0 1.2 1 0 0 1 1 1 0 Prolyl oligopeptidase family PGAP1 PF07819.13 ORF124764 - 0.019 14.7 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein DUF676 PF05057.14 ORF124764 - 0.025 14.1 0.1 0.049 13.1 0.1 1.4 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 ORF124764 - 0.066 12.5 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 3HCDH_RFF PF18321.1 ORF124764 - 0.22 12.0 0.0 0.38 11.2 0.0 1.3 1 0 0 1 1 1 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FCD PF07729.12 ORF119998 - 0.37 11.2 4.0 0.43 11.0 0.7 2.2 2 0 0 2 2 2 0 FCD domain Thaumatin PF00314.17 ORF119154 - 0.017 14.8 0.0 0.032 13.8 0.0 1.4 1 0 0 1 1 1 0 Thaumatin family Zip PF02535.22 ORF119004 - 2.9e-31 108.9 11.8 6e-28 98.0 11.8 2.5 1 1 0 1 1 1 1 ZIP Zinc transporter Peripla_BP_1 PF00532.21 ORF11878 - 3.8e-29 102.0 0.0 4.8e-29 101.6 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 ORF11878 - 6.1e-23 82.0 0.0 2.5e-22 80.0 0.0 1.9 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 ORF11878 - 3.4e-12 46.5 0.0 4.4e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain LacI PF00356.21 ORF11878 - 9.2e-11 41.4 0.0 2e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, lacI family DUF2701 PF10857.8 ORF11878 - 0.21 11.7 0.0 0.34 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2701) VASt PF16016.5 ORF115602 - 2.8e-17 63.5 0.1 4.6e-17 62.8 0.1 1.4 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain UPF0121 PF03661.13 ORF114170 - 1.5e-15 57.2 4.3 2.7e-15 56.4 4.3 1.3 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0121) E3_binding PF02817.17 ORF110695 - 1.9e-06 28.1 0.0 4.5e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 e3 binding domain 2-oxoacid_dh PF00198.23 ORF110695 - 0.0039 16.7 0.0 1.5 8.2 0.0 2.2 2 0 0 2 2 2 2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) adh_short PF00106.25 ORF10964 - 2.9e-40 137.8 0.0 3.9e-40 137.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF10964 - 1.4e-27 96.7 0.0 2e-27 96.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF10964 - 1.9e-10 40.9 0.0 3.2e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF10964 - 0.0039 16.4 0.0 0.0071 15.5 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein THF_DHG_CYH_C PF02882.19 ORF10964 - 0.057 12.7 0.1 0.13 11.5 0.0 1.6 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF1776 PF08643.10 ORF10964 - 0.085 12.2 0.0 0.15 11.4 0.0 1.5 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) Hydrophob_seed PF14547.6 ORF10964 - 0.097 12.9 0.1 0.19 12.0 0.1 1.6 1 0 0 1 1 1 0 Hydrophobic seed protein Eno-Rase_NADH_b PF12242.8 ORF10964 - 0.1 12.3 0.9 0.23 11.3 0.1 1.9 2 0 0 2 2 2 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Transferase PF02458.15 ORF104056 - 0.0048 15.6 0.0 0.19 10.4 0.0 2.0 2 0 0 2 2 2 2 Transferase family Condensation PF00668.20 ORF104056 - 0.21 10.2 0.2 0.34 9.5 0.2 1.2 1 0 0 1 1 1 0 Condensation domain DUF3991 PF13154.6 NODE_21648_length_933_cov_98.146993_g16677_i0forward_frame_1 - 0.093 13.1 0.0 0.2 12.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3991) zf-primase PF09329.11 NODE_21551_length_935_cov_295.290000_g16598_i0reverse_frame_2 - 0.0016 18.2 1.6 0.0038 17.0 1.6 1.7 1 0 0 1 1 1 1 Primase zinc finger PyocinActivator PF11112.8 NODE_21551_length_935_cov_295.290000_g16598_i0reverse_frame_2 - 0.0071 16.4 1.0 0.015 15.4 0.1 2.0 3 0 0 3 3 3 1 Pyocin activator protein PrtN PIG-F PF06699.11 NODE_21542_length_936_cov_6.590455_g16592_i0forward_frame_2 - 0.17 12.1 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 GPI biosynthesis protein family Pig-F NinE PF05322.11 ORF90999 - 0.56 10.1 3.6 19 5.2 0.7 2.7 2 0 0 2 2 2 0 NINE Protein zf-RING_2 PF13639.6 ORF87369 - 1.2e-09 38.3 8.0 1.2e-09 38.3 8.0 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF87369 - 1.8e-06 27.7 5.6 4.4e-06 26.5 5.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF87369 - 7.4e-06 25.6 2.1 2e-05 24.2 2.1 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF87369 - 1.8e-05 25.0 4.6 1.8e-05 25.0 4.6 1.9 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF87369 - 0.00013 21.7 9.4 0.00013 21.7 9.4 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) WWE PF02825.20 ORF87369 - 0.0002 21.9 0.5 0.00069 20.2 0.5 2.0 1 1 0 1 1 1 1 WWE domain zf-RING_5 PF14634.6 ORF87369 - 0.00024 21.0 6.2 0.00064 19.6 6.2 1.8 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF87369 - 0.0017 17.9 4.6 0.0017 17.9 4.6 2.1 3 0 0 3 3 2 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF87369 - 0.0044 16.9 5.1 0.0044 16.9 5.1 2.4 2 1 0 2 2 2 1 Prokaryotic RING finger family 1 zf-ANAPC11 PF12861.7 ORF87369 - 0.0074 16.3 4.4 0.022 14.8 4.3 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF87369 - 0.019 15.0 9.3 0.025 14.6 7.8 2.0 2 0 0 2 2 2 0 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF87369 - 0.027 14.3 6.5 0.067 13.1 6.5 1.7 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF87369 - 0.038 13.9 5.9 0.12 12.3 6.0 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF87369 - 0.081 12.7 5.3 0.18 11.6 5.3 1.7 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3H2C3 PF17122.5 ORF87369 - 0.13 12.3 3.3 0.36 10.9 3.3 1.8 1 0 0 1 1 1 0 Zinc-finger Methyltransf_25 PF13649.6 ORF87247 - 3.1e-15 56.7 0.1 1.3e-14 54.6 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF87247 - 1.1e-14 54.8 0.4 1.5e-13 51.2 0.0 2.5 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF87247 - 1.3e-11 45.1 0.0 2.8e-11 44.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF87247 - 4.1e-10 39.6 0.0 6.8e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF87247 - 2.3e-09 37.3 0.0 3.3e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF87247 - 7.4e-05 22.2 0.0 0.00013 21.4 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family NodS PF05401.11 ORF87247 - 0.00028 20.6 0.0 0.00051 19.7 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_PK PF05891.12 ORF87247 - 0.0017 17.9 0.0 0.0068 16.0 0.0 1.8 1 1 0 2 2 2 1 AdoMet dependent proline di-methyltransferase CMAS PF02353.20 ORF87247 - 0.0028 17.0 0.0 0.0037 16.6 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_33 PF10017.9 ORF87247 - 0.014 14.5 0.1 0.58 9.3 0.1 2.1 1 1 1 2 2 2 0 Histidine-specific methyltransferase, SAM-dependent DREV PF05219.12 ORF87247 - 0.054 12.6 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase MTS PF05175.14 ORF87247 - 0.084 12.4 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain MbeD_MobD PF04899.12 ORF87247 - 0.095 12.8 0.6 0.23 11.6 0.6 1.6 1 0 0 1 1 1 0 MbeD/MobD like Methyltransf_18 PF12847.7 ORF87247 - 0.14 12.1 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Hydrolase PF00702.26 ORF85218 - 0.0028 18.0 0.1 0.004 17.5 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase UVR PF02151.19 ORF84898 - 4.4e-05 23.1 7.7 8.1e-05 22.2 3.2 2.4 2 0 0 2 2 2 1 UvrB/uvrC motif SHNi-TPR PF10516.9 ORF84898 - 0.058 12.9 0.2 0.13 11.7 0.2 1.7 1 0 0 1 1 1 0 SHNi-TPR T6PP_N PF18572.1 ORF84898 - 0.066 13.1 1.9 0.18 11.6 1.7 1.8 1 1 0 1 1 1 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain Acetyltransf_10 PF13673.7 ORF84898 - 0.14 12.1 0.0 0.41 10.6 0.0 1.7 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain LysR_substrate PF03466.20 ORF80621 - 5.5e-30 104.3 0.0 7.7e-30 103.8 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF80621 - 2e-20 72.5 0.6 3.3e-20 71.8 0.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 ORF80621 - 0.001 18.8 0.0 0.0021 17.8 0.0 1.5 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain HTH_24 PF13412.6 ORF80621 - 0.0015 18.1 0.0 0.0034 16.9 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 ORF80621 - 0.046 13.6 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_5 PF01022.20 ORF80621 - 0.058 13.3 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 ORF80621 - 0.093 12.8 0.1 0.22 11.6 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 ORF80621 - 0.093 12.6 0.1 0.24 11.3 0.1 1.6 1 0 0 1 1 1 0 MarR family QRPTase_C PF01729.19 ORF773 - 3.9e-63 212.2 0.1 5.1e-63 211.9 0.1 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 ORF773 - 1.7e-25 88.9 0.0 9.9e-25 86.4 0.0 2.1 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain IMPDH PF00478.25 ORF773 - 0.0003 19.9 0.1 0.00033 19.7 0.1 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain PEP_mutase PF13714.6 ORF773 - 0.011 15.2 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 Phosphoenolpyruvate phosphomutase Ribul_P_3_epim PF00834.19 ORF773 - 0.049 13.0 0.1 0.11 11.8 0.1 1.6 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family NIBRIN_BRCT_II PF16508.5 ORF773 - 0.063 13.6 0.0 6.9 7.0 0.0 2.4 2 0 0 2 2 2 0 Second BRCT domain on Nijmegen syndrome breakage protein IGPS PF00218.21 ORF773 - 0.075 12.2 0.9 0.15 11.2 0.9 1.5 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase Biotin_lipoyl PF00364.22 ORF773 - 0.1 12.5 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 Biotin-requiring enzyme SfsA PF03749.13 ORF773 - 0.14 12.0 0.0 0.44 10.5 0.0 1.9 1 1 0 1 1 1 0 Sugar fermentation stimulation protein RE domain ABC_tran PF00005.27 ORF69247 - 1.4e-19 71.0 3.3 1.4e-19 71.0 3.3 2.4 2 1 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF69247 - 6.1e-07 29.1 1.9 1.9e-05 24.2 1.9 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF69247 - 0.0016 18.1 0.1 0.0034 17.1 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATPase_2 PF01637.18 ORF69247 - 0.002 18.1 0.2 0.002 18.1 0.2 2.2 2 1 1 3 3 3 1 ATPase domain predominantly from Archaea AAA_11 PF13086.6 ORF69247 - 0.011 15.5 1.7 0.39 10.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 ORF69247 - 0.012 15.6 0.1 0.065 13.3 0.0 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_22 PF13401.6 ORF69247 - 0.017 15.4 0.2 1 9.6 0.0 2.5 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 ORF69247 - 0.027 14.8 0.2 0.13 12.7 0.0 2.0 2 1 1 3 3 3 0 AAA ATPase domain RsgA_GTPase PF03193.16 ORF69247 - 0.037 14.0 1.0 0.088 12.7 0.1 1.9 2 0 0 2 2 2 0 RsgA GTPase Dynamin_N PF00350.23 ORF69247 - 0.04 14.0 1.2 0.04 14.0 1.2 2.2 2 1 0 2 2 2 0 Dynamin family Vps23_core PF09454.10 ORF57908 - 0.029 14.3 0.4 7.6 6.6 0.0 3.1 3 0 0 3 3 3 0 Vps23 core domain TPR_14 PF13428.6 ORF57908 - 0.068 14.0 4.1 3.7 8.6 0.7 3.5 2 1 1 3 3 3 0 Tetratricopeptide repeat Fer4_4 PF12800.7 ORF55999 - 0.91 10.2 4.6 4.8 7.9 4.6 2.2 1 0 0 1 1 1 0 4Fe-4S binding domain DNA_Packaging PF11053.8 ORF51218 - 0.68 9.8 3.2 4.2 7.2 0.2 2.5 1 1 0 2 2 2 0 Terminase DNA packaging enzyme MORN PF02493.20 ORF49876 - 4.1e-40 133.3 66.2 4.2e-07 29.5 0.4 11.3 11 0 0 11 11 11 11 MORN repeat BssC_TutF PF08201.11 ORF49876 - 0.43 10.6 2.0 2.4 8.2 0.2 2.7 1 1 0 2 2 2 0 BssC/TutF protein PMR5N PF14416.6 ORF49876 - 0.73 10.2 4.5 1.8 8.9 0.9 3.0 1 1 2 3 3 3 0 PMR5 N terminal Domain PNP_UDP_1 PF01048.20 ORF47455 - 1.3e-24 86.8 0.0 1.6e-24 86.5 0.0 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily TrkA_N PF02254.18 ORF4598 - 4.5e-27 94.6 0.0 1.1e-26 93.4 0.0 1.6 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_7 PF13241.6 ORF4598 - 0.0034 17.8 0.0 0.0077 16.7 0.0 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding ApbA PF02558.16 ORF4598 - 0.0056 16.3 0.0 0.01 15.5 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 ORF4598 - 0.011 15.0 0.1 0.014 14.6 0.1 1.4 1 1 0 1 1 1 0 FAD binding domain Na_H_Exchanger PF00999.21 ORF4598 - 0.013 14.3 0.6 0.017 13.9 0.6 1.1 1 0 0 1 1 1 0 Sodium/hydrogen exchanger family 2-Hacid_dh_C PF02826.19 ORF4598 - 0.015 14.7 0.0 0.057 12.8 0.0 1.9 1 1 1 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF4598 - 0.031 14.3 0.0 0.061 13.4 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ADH_zinc_N PF00107.26 ORF4598 - 0.06 13.3 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.14 ORF4598 - 0.078 12.5 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 ORF4598 - 0.16 12.2 0.0 0.34 11.2 0.0 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Patatin PF01734.22 ORF43800 - 4.6e-24 85.7 0.0 7.6e-24 85.0 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase zf-RING_2 PF13639.6 ORF36735 - 8.6e-09 35.6 11.1 1.1e-07 32.0 7.0 2.3 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF36735 - 2.1e-08 34.3 6.1 2.1e-08 34.3 6.1 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain Zn_ribbon_17 PF17120.5 ORF36735 - 6.9e-05 22.4 5.2 6.9e-05 22.4 5.2 2.2 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF36735 - 0.00013 21.6 6.0 0.038 13.7 2.7 2.7 2 0 0 2 2 2 2 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF36735 - 0.00026 20.8 13.5 0.00039 20.2 8.6 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF36735 - 0.00033 20.8 6.2 0.0092 16.1 3.4 2.6 2 0 0 2 2 2 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 ORF36735 - 0.00084 19.2 11.4 0.0031 17.3 7.8 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF36735 - 0.0028 17.7 1.9 0.0028 17.7 1.9 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF36735 - 0.0058 16.6 5.4 0.0058 16.6 5.4 2.4 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF36735 - 0.0061 16.4 6.0 0.0061 16.4 6.0 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) CTU2 PF10288.9 ORF36735 - 0.0088 16.3 0.9 0.0088 16.3 0.9 2.3 1 1 1 2 2 2 1 Cytoplasmic tRNA 2-thiolation protein 2 Prok-RING_4 PF14447.6 ORF36735 - 0.021 14.7 3.2 0.021 14.7 3.2 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zinc_ribbon_16 PF17034.5 ORF36735 - 0.034 14.4 5.3 0.034 14.3 1.1 2.3 2 0 0 2 2 2 0 Zinc-ribbon like family zf-RING_UBOX PF13445.6 ORF36735 - 0.04 13.9 5.2 0.043 13.9 2.2 2.3 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_6 PF14835.6 ORF36735 - 0.2 11.5 2.4 0.43 10.5 2.4 1.5 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Ribosomal_60s PF00428.19 ORF36735 - 0.33 11.5 0.2 0.33 11.5 0.2 2.2 2 0 0 2 2 2 0 60s Acidic ribosomal protein Tmpp129 PF10272.9 ORF36735 - 0.8 8.9 10.2 0.61 9.3 0.7 2.7 2 1 1 3 3 3 0 Putative transmembrane protein precursor zf-C3H2C3 PF17122.5 ORF36735 - 3.4 7.8 9.9 0.43 10.7 4.1 2.3 2 0 0 2 2 2 0 Zinc-finger MaoC_dehydratas PF01575.19 ORF35547 - 1.6e-16 60.0 0.0 2.8e-15 56.0 0.0 2.1 2 0 0 2 2 2 1 MaoC like domain Gtr1_RagA PF04670.12 ORF33572 - 8.6e-92 306.7 2.0 1.1e-91 306.4 2.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Arf PF00025.21 ORF33572 - 2.5e-09 36.8 0.5 1.3e-08 34.5 0.2 2.0 2 0 0 2 2 2 1 ADP-ribosylation factor family Ras PF00071.22 ORF33572 - 4.1e-09 36.2 0.2 4.1e-09 36.2 0.2 2.0 2 1 0 2 2 2 1 Ras family SRPRB PF09439.10 ORF33572 - 2.2e-07 30.5 0.1 3.4e-07 29.9 0.1 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF33572 - 4e-07 30.3 0.1 1.1e-06 28.8 0.0 1.8 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 ORF33572 - 4.3e-05 23.6 0.0 8.2e-05 22.7 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF815 PF05673.13 ORF33572 - 0.0034 16.6 0.4 0.056 12.6 0.4 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF815) ABC_tran PF00005.27 ORF33572 - 0.048 14.2 0.5 0.22 12.0 0.0 2.5 2 2 1 3 3 3 0 ABC transporter PduV-EutP PF10662.9 ORF33572 - 0.051 13.3 0.0 0.18 11.6 0.0 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation RuvB_N PF05496.12 ORF33572 - 0.095 12.4 0.0 0.3 10.8 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 ORF33572 - 0.096 13.1 0.1 1.7 9.1 0.1 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ATP_bind_1 PF03029.17 ORF33572 - 0.98 9.1 5.0 3.5 7.4 0.4 2.6 1 1 0 2 2 2 0 Conserved hypothetical ATP binding protein MyTH4 PF00784.17 ORF31987 - 0.016 15.7 21.7 1.4 9.4 0.3 5.3 4 2 2 6 6 6 0 MyTH4 domain LMBR1 PF04791.16 ORF29723 - 0.78 8.6 7.1 0.9 8.4 7.1 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein LAGLIDADG_3 PF14528.6 ORF28404 - 0.00012 22.3 0.1 0.00034 20.9 0.0 1.8 2 0 0 2 2 2 1 LAGLIDADG-like domain LAGLIDADG_1 PF00961.19 ORF28404 - 0.043 14.8 0.3 0.18 12.8 0.0 2.2 2 1 0 2 2 2 0 LAGLIDADG endonuclease Sugar_tr PF00083.24 ORF24037 - 1.5e-27 96.6 11.3 1.8e-27 96.3 11.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter RT_RNaseH_2 PF17919.1 ORF23669 - 0.032 14.2 0.0 0.054 13.5 0.0 1.3 1 0 0 1 1 1 0 RNase H-like domain found in reverse transcriptase OTCace_N PF02729.21 ORF18094 - 5.9e-48 162.6 0.0 1.5e-47 161.3 0.1 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 ORF18094 - 3.1e-29 102.1 0.0 4.6e-29 101.5 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FecR PF04773.13 ORF16471 - 2.5e-16 60.1 0.6 3.8e-16 59.5 0.6 1.3 1 0 0 1 1 1 1 FecR protein DUF4880 PF16220.5 ORF16471 - 5.4e-09 35.8 11.5 5.4e-09 35.8 11.5 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4880) DUF2570 PF10828.8 ORF16471 - 0.38 10.6 0.0 0.38 10.6 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2570) Peptidase_S11 PF00768.20 ORF144798 - 7.8e-74 248.1 0.1 9.4e-74 247.9 0.1 1.1 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase PBP5_C PF07943.13 ORF144798 - 2.5e-24 85.3 0.0 4.2e-24 84.6 0.0 1.4 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain Beta-lactamase2 PF13354.6 ORF144798 - 4.4e-05 23.2 0.0 6.3e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase enzyme family 2OG-FeII_Oxy_5 PF13759.6 ORF143302 - 2.8e-14 53.4 0.0 5.4e-14 52.4 0.0 1.5 1 1 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase 2OG-FeII_Oxy_3 PF13640.6 ORF143302 - 0.057 14.3 0.1 0.18 12.7 0.0 1.9 2 1 0 2 2 2 0 2OG-Fe(II) oxygenase superfamily Patatin PF01734.22 ORF135020 - 4.6e-24 85.7 0.0 7.6e-24 85.0 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase Metallophos PF00149.28 ORF134583 - 6.7e-36 124.7 0.1 1.1e-35 124.0 0.1 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Glyco_hydro_65N PF03636.15 ORF134583 - 0.011 15.4 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain STPPase_N PF16891.5 ORF134583 - 0.087 13.3 0.2 0.2 12.1 0.2 1.6 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain DUF5378 PF17349.2 ORF134583 - 0.096 12.0 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5378) zf-RING_2 PF13639.6 ORF122967 - 8.6e-09 35.6 11.1 1.1e-07 32.0 7.0 2.3 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF122967 - 2.1e-08 34.3 6.1 2.1e-08 34.3 6.1 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain Zn_ribbon_17 PF17120.5 ORF122967 - 6.9e-05 22.4 5.2 6.9e-05 22.4 5.2 2.2 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 ORF122967 - 0.00013 21.6 6.0 0.038 13.7 2.7 2.7 2 0 0 2 2 2 2 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF122967 - 0.00026 20.8 13.5 0.00039 20.2 8.6 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF122967 - 0.00033 20.8 6.2 0.0092 16.1 3.4 2.6 2 0 0 2 2 2 1 FANCL C-terminal domain zf-C3HC4 PF00097.25 ORF122967 - 0.00084 19.2 11.4 0.0031 17.3 7.8 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF122967 - 0.0028 17.7 1.9 0.0028 17.7 1.9 1.6 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF122967 - 0.0058 16.6 5.4 0.0058 16.6 5.4 2.4 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF122967 - 0.0061 16.4 6.0 0.0061 16.4 6.0 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) CTU2 PF10288.9 ORF122967 - 0.0088 16.3 0.9 0.0088 16.3 0.9 2.3 1 1 1 2 2 2 1 Cytoplasmic tRNA 2-thiolation protein 2 Prok-RING_4 PF14447.6 ORF122967 - 0.021 14.7 3.2 0.021 14.7 3.2 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zinc_ribbon_16 PF17034.5 ORF122967 - 0.034 14.4 5.3 0.034 14.3 1.1 2.3 2 0 0 2 2 2 0 Zinc-ribbon like family zf-RING_UBOX PF13445.6 ORF122967 - 0.04 13.9 5.2 0.043 13.9 2.2 2.3 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_6 PF14835.6 ORF122967 - 0.2 11.5 2.4 0.43 10.5 2.4 1.5 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Ribosomal_60s PF00428.19 ORF122967 - 0.33 11.5 0.2 0.33 11.5 0.2 2.2 2 0 0 2 2 2 0 60s Acidic ribosomal protein Tmpp129 PF10272.9 ORF122967 - 0.8 8.9 10.2 0.61 9.3 0.7 2.7 2 1 1 3 3 3 0 Putative transmembrane protein precursor zf-C3H2C3 PF17122.5 ORF122967 - 3.4 7.8 9.9 0.43 10.7 4.1 2.3 2 0 0 2 2 2 0 Zinc-finger Pkinase PF00069.25 ORF122682 - 3e-57 194.0 0.1 4.3e-57 193.5 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF122682 - 4.1e-34 118.0 0.0 6.1e-34 117.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF122682 - 3.8e-07 29.7 0.1 7e-07 28.8 0.0 1.5 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF122682 - 4e-05 22.6 0.2 8.8e-05 21.4 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF122682 - 0.0028 16.7 0.8 0.0036 16.3 0.1 1.5 2 0 0 2 2 2 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 ORF122682 - 0.0037 16.4 0.0 0.01 14.9 0.0 1.7 1 1 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 ORF122682 - 0.22 11.4 0.0 0.33 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family LpxK PF02606.14 ORF121415 - 0.13 11.3 2.1 0.67 9.0 0.7 2.0 1 1 1 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase GIDA PF01134.22 ORF121415 - 1.2 8.2 7.1 1.7 7.6 7.1 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A RCC1_2 PF13540.6 ORF119902 - 1.5e-06 27.9 7.0 0.33 10.8 0.6 3.4 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF119902 - 0.033 14.3 0.2 7.6 6.6 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Patatin PF01734.22 ORF114889 - 4.6e-24 85.7 0.0 7.6e-24 85.0 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks58.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks58.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks58.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks58.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:14 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cyd_oper_YbgE PF09600.10 ORF11105 - 0.037 14.4 0.9 0.083 13.3 0.2 1.9 2 0 0 2 2 2 0 Cyd operon protein YbgE (Cyd_oper_YbgE) Ribosomal_S15 PF00312.22 ORF11105 - 0.042 14.1 0.0 0.075 13.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S15 RCC1 PF00415.18 ORF109224 - 3.4e-24 85.2 7.4 2.2e-09 37.8 0.0 5.4 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF109224 - 7.5e-17 60.7 28.6 9.8e-08 31.6 0.7 5.6 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat adh_short PF00106.25 ORF103502 - 6.1e-28 97.6 0.0 7.9e-28 97.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF103502 - 5.2e-16 58.9 0.0 7e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase 3HCDH_N PF02737.18 ORF103502 - 0.04 13.8 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 ORF103502 - 0.066 12.8 0.0 0.097 12.2 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF103502 - 0.074 13.0 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PIP5K PF01504.18 ORF102193 - 1.4e-05 24.5 0.0 1.8e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase NHL PF01436.21 ORF10126 - 0.0016 18.4 0.5 1.8 8.7 0.1 3.2 3 0 0 3 3 3 2 NHL repeat Rick_17kDa_Anti PF05433.15 NODE_21798_length_928_cov_94.267637_g16808_i0reverse_frame_1 - 0.62 10.0 10.4 3 7.8 10.4 1.9 1 1 0 1 1 1 0 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 NODE_21798_length_928_cov_94.267637_g16808_i0reverse_frame_1 - 2.1 8.4 12.0 4.2 7.5 12.0 1.4 1 0 0 1 1 1 0 Glycine zipper DUF4750 PF15938.5 NODE_21798_length_928_cov_94.267637_g16808_i0forward_frame_1 - 0.035 13.8 0.6 0.035 13.8 0.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4750) Prok-E2_E PF14462.6 NODE_21793_length_928_cov_165.057111_g16804_i0reverse_frame_1 - 6.6 6.6 7.7 1.1 9.1 0.5 2.6 2 1 1 3 3 3 0 Prokaryotic E2 family E Antimicrobial11 PF08106.11 NODE_21762_length_929_cov_111.168904_g16775_i0forward_frame_1 - 2.1 8.5 8.1 30 4.9 0.2 3.6 3 0 0 3 3 3 0 Formaecin family Tlr3_TMD PF17968.1 NODE_21732_length_930_cov_3.282682_g16751_i0reverse_frame_1 - 3.6 7.8 7.0 0.34 11.1 0.5 2.9 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain PAN_3 PF08277.12 ORF99638 - 0.014 15.2 2.7 0.044 13.6 2.7 1.8 1 0 0 1 1 1 0 PAN-like domain Complex1_LYR_2 PF13233.6 ORF99545 - 0.28 12.0 4.7 26 5.6 4.7 2.6 1 1 0 1 1 1 0 Complex1_LYR-like zf-C5HC2 PF02928.16 ORF97988 - 2.4 8.6 6.1 7 7.1 2.2 2.7 2 0 0 2 2 2 0 C5HC2 zinc finger Helicase_C_4 PF13871.6 ORF97491 - 0.059 13.0 2.9 0.074 12.7 2.1 1.4 1 1 0 1 1 1 0 C-terminal domain on Strawberry notch homologue Elf4 PF07011.11 ORF97491 - 1 9.3 8.0 0.44 10.5 1.6 2.4 1 1 1 2 2 2 0 Early Flowering 4 domain Sigma54_activat PF00158.26 ORF95341 - 3.7e-71 238.2 0.0 1.3e-70 236.4 0.0 1.8 2 0 0 2 2 2 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 ORF95341 - 5.7e-23 81.6 0.0 2.3e-22 79.6 0.0 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 ORF95341 - 2.2e-06 27.7 0.0 3.8e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 ORF95341 - 7.4e-05 23.2 0.0 0.00014 22.3 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 ORF95341 - 0.0023 18.1 0.0 0.0043 17.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 ORF95341 - 0.014 14.8 0.0 5.2 6.4 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI HTH_8 PF02954.19 ORF95341 - 0.02 14.7 0.2 0.02 14.7 0.2 2.3 3 0 0 3 3 3 0 Bacterial regulatory protein, Fis family AAA_3 PF07726.11 ORF95341 - 0.034 14.0 0.0 0.084 12.7 0.0 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) UPF0175 PF03683.13 ORF95341 - 0.047 13.4 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0175) NACHT PF05729.12 ORF95341 - 0.11 12.4 0.0 1.3 8.9 0.0 2.3 2 1 0 2 2 2 0 NACHT domain AAA_16 PF13191.6 ORF95341 - 0.14 12.5 0.2 0.38 11.1 0.2 1.9 1 1 0 1 1 1 0 AAA ATPase domain ATP-grasp_4 PF13535.6 ORF95341 - 0.15 11.6 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain AAA_7 PF12775.7 ORF95341 - 0.18 11.3 0.0 0.35 10.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region MCM PF00493.23 ORF95341 - 0.19 10.8 0.0 0.51 9.4 0.0 1.6 1 1 0 1 1 1 0 MCM P-loop domain DUF723 PF05265.13 ORF95340 - 0.065 13.2 3.4 0.16 12.0 3.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF723) DUF1494 PF07379.11 ORF88493 - 0.95 9.3 4.9 0.73 9.7 1.5 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1494) ERM PF00769.19 ORF78753 - 0.0049 16.7 7.2 0.0049 16.7 7.2 2.1 1 1 0 2 2 2 1 Ezrin/radixin/moesin family Cnn_1N PF07989.11 ORF78753 - 0.0054 16.9 23.8 0.056 13.6 5.1 2.9 2 0 0 2 2 2 2 Centrosomin N-terminal motif 1 Uso1_p115_C PF04871.13 ORF78753 - 0.022 15.1 0.1 0.022 15.1 0.1 3.0 3 1 0 3 3 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region VP9 PF09625.10 ORF78753 - 0.025 14.8 0.3 0.025 14.8 0.3 2.5 2 0 0 2 2 2 0 VP9 protein ZapB PF06005.12 ORF78753 - 0.038 14.4 2.1 0.038 14.4 2.1 3.4 3 1 0 3 3 2 0 Cell division protein ZapB CEP209_CC5 PF16574.5 ORF78753 - 0.043 14.0 20.9 0.043 14.0 12.5 2.9 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 TMF_TATA_bd PF12325.8 ORF78753 - 0.081 13.2 18.0 0.038 14.2 9.1 2.6 3 0 0 3 3 2 0 TATA element modulatory factor 1 TATA binding CCDC92 PF14916.6 ORF78753 - 0.1 12.4 12.0 3.6 7.4 1.4 3.9 3 1 0 3 3 3 0 Coiled-coil domain of unknown function DivIVA PF05103.13 ORF78753 - 0.17 12.0 8.6 3 7.9 2.1 2.6 2 0 0 2 2 2 0 DivIVA protein Tup_N PF08581.10 ORF78753 - 0.17 12.2 16.4 1.9 8.8 5.6 2.9 2 0 0 2 2 2 0 Tup N-terminal Snapin_Pallidin PF14712.6 ORF78753 - 0.21 12.0 10.7 1.3 9.5 3.9 2.7 2 0 0 2 2 2 0 Snapin/Pallidin DUF3450 PF11932.8 ORF78753 - 0.23 10.7 9.3 0.87 8.8 4.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Spc7 PF08317.11 ORF78753 - 0.32 9.8 19.5 0.79 8.5 4.5 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein Phage_GP20 PF06810.11 ORF78753 - 0.38 10.5 20.8 0.099 12.4 2.2 3.0 3 1 0 3 3 3 0 Phage minor structural protein GP20 UPF0242 PF06785.11 ORF78753 - 0.46 10.6 17.7 2.1 8.4 1.3 2.5 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Ead_Ea22 PF13935.6 ORF78753 - 0.66 10.6 12.5 2.2 8.9 1.1 2.4 1 1 1 2 2 2 0 Ead/Ea22-like protein Troponin PF00992.20 ORF78753 - 0.98 9.7 25.9 0.65 10.3 1.8 3.0 2 1 1 3 3 3 0 Troponin Lebercilin PF15619.6 ORF78753 - 1 9.0 22.1 0.053 13.2 5.5 3.7 3 1 1 4 4 4 0 Ciliary protein causing Leber congenital amaurosis disease PhoU PF01895.19 ORF78753 - 1.3 9.6 9.5 1.4 9.4 2.2 2.6 2 0 0 2 2 2 0 PhoU domain DUF1664 PF07889.12 ORF78753 - 1.4 9.0 7.2 6.8 6.8 0.2 2.8 3 0 0 3 3 2 0 Protein of unknown function (DUF1664) Ly49 PF08391.10 ORF78753 - 1.5 9.2 11.2 0.32 11.3 3.8 2.5 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region TSC22 PF01166.18 ORF78753 - 2.4 8.5 16.6 0.56 10.5 4.3 4.0 2 2 1 3 3 3 0 TSC-22/dip/bun family Cep57_CLD_2 PF14197.6 ORF78753 - 3.3 7.9 20.7 0.46 10.6 4.7 3.9 2 2 2 4 4 4 0 Centrosome localisation domain of PPC89 AKNA PF12443.8 ORF78753 - 3.3 8.4 8.6 4.2 8.1 0.3 3.0 2 2 0 2 2 2 0 AT-hook-containing transcription factor Fe-S_assembly PF04384.13 ORF78753 - 3.8 8.2 6.9 3.1 8.5 2.3 2.6 2 0 0 2 2 2 0 Iron-sulphur cluster assembly DivIC PF04977.15 ORF78753 - 5.5 6.8 17.9 1.9 8.3 1.1 4.1 3 2 2 5 5 5 0 Septum formation initiator DUF641 PF04859.12 ORF78753 - 5.9 7.2 12.9 5.6 7.3 5.3 3.1 2 1 1 3 3 3 0 Plant protein of unknown function (DUF641) ACCA PF03255.14 ORF78753 - 8.7 6.2 9.0 10 6.0 0.5 2.6 2 0 0 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SGL PF08450.12 ORF77770 - 1.3e-13 51.1 0.0 1.7e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 ORF77770 - 7.8e-08 32.0 1.8 0.0067 16.4 0.0 4.8 5 0 0 5 5 5 2 NHL repeat Str_synth PF03088.16 ORF77770 - 0.018 15.1 0.0 0.051 13.7 0.0 1.8 1 1 0 1 1 1 0 Strictosidine synthase Arylesterase PF01731.20 ORF77770 - 0.059 13.6 0.0 0.21 11.8 0.0 2.0 2 0 0 2 2 2 0 Arylesterase DUF5074 PF16819.5 ORF77770 - 0.14 12.2 0.0 14 5.7 0.0 3.3 2 1 0 2 2 2 0 Domain of unknown function (DUF5074) YorP PF09629.10 ORF77770 - 0.17 12.1 0.2 8.9 6.6 0.1 3.0 2 1 1 3 3 3 0 YorP protein MtrF PF09472.10 ORF77379 - 0.037 13.4 1.2 0.082 12.3 1.2 1.6 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) RL10P_insert PF17777.1 ORF75587 - 0.048 13.7 0.0 0.31 11.1 0.0 2.4 2 0 0 2 2 2 0 Insertion domain in 60S ribosomal protein L10P SNAP PF14938.6 ORF74884 - 1.7e-74 250.8 14.6 1.9e-74 250.6 14.6 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP Spatacsin_C PF14649.6 ORF74884 - 3.8e-05 22.9 6.2 0.00023 20.4 1.5 2.2 1 1 0 2 2 2 2 Spatacsin C-terminus OSCP PF00213.18 ORF74884 - 0.0049 17.0 0.3 1.6 8.8 0.0 2.6 2 1 0 2 2 2 2 ATP synthase delta (OSCP) subunit DHR-2 PF06920.13 ORF74884 - 0.007 15.1 2.7 0.007 15.1 2.7 2.1 2 1 0 2 2 2 1 Dock homology region 2 TPR_12 PF13424.6 ORF74884 - 0.0078 16.5 7.5 0.62 10.4 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat Turandot PF07240.11 ORF74884 - 0.023 14.7 1.8 0.32 11.0 0.3 2.8 2 1 1 3 3 3 0 Stress-inducible humoral factor Turandot TPR_10 PF13374.6 ORF74884 - 0.41 10.6 9.5 3.3 7.7 0.1 4.4 3 1 2 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF74884 - 2.3 9.0 6.9 89 4.1 0.1 4.4 3 1 1 4 4 4 0 Tetratricopeptide repeat NSF PF02071.20 ORF74884 - 4.6 8.4 16.6 5.5 8.2 1.5 5.1 6 0 0 6 6 6 0 Aromatic-di-Alanine (AdAR) repeat Epimerase PF01370.21 ORF70449 - 6e-47 160.1 0.0 7.7e-47 159.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF70449 - 1.1e-22 80.9 0.0 1.7e-22 80.3 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 ORF70449 - 4.4e-13 48.9 0.0 6.3e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 ORF70449 - 2.7e-09 36.6 0.0 6.2e-09 35.4 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 ORF70449 - 1.9e-05 23.9 0.0 0.0072 15.5 0.0 2.4 2 0 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 ORF70449 - 3.2e-05 23.2 0.0 0.049 12.8 0.0 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein KR PF08659.10 ORF70449 - 0.1 12.5 0.1 0.24 11.3 0.1 1.8 1 1 0 1 1 1 0 KR domain adh_short PF00106.25 ORF70449 - 0.15 11.5 0.0 0.24 10.8 0.0 1.4 1 0 0 1 1 1 0 short chain dehydrogenase ThiF PF00899.21 ORF70449 - 0.24 10.8 0.2 2.8 7.2 0.4 2.0 2 0 0 2 2 2 0 ThiF family DUF2838 PF10998.8 ORF65633 - 5e-20 71.8 12.8 5e-20 71.8 12.8 2.9 2 1 0 3 3 3 1 Protein of unknown function (DUF2838) Pkinase PF00069.25 ORF63595 - 3.6e-50 170.8 1.3 4.6e-50 170.4 1.3 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63595 - 1.3e-30 106.6 0.3 1.6e-30 106.3 0.3 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF63595 - 1e-06 28.3 0.0 9.5e-06 25.1 0.0 2.1 1 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF63595 - 0.00015 21.2 0.1 0.0003 20.2 0.1 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF63595 - 0.00043 19.2 1.0 0.00066 18.6 1.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF63595 - 0.0011 19.0 0.0 0.0059 16.6 0.0 1.9 1 1 0 2 2 2 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF63595 - 0.0072 15.3 2.7 0.18 10.7 2.7 2.1 1 1 0 1 1 1 1 Haspin like kinase domain Choline_kinase PF01633.20 ORF63595 - 0.0098 15.5 0.3 0.027 14.1 0.2 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase RIO1 PF01163.22 ORF63595 - 0.01 15.5 0.4 0.029 14.0 0.4 1.7 1 1 0 1 1 1 0 RIO1 family Sec8_exocyst PF04048.14 ORF63595 - 0.037 13.9 0.4 0.072 13.0 0.4 1.5 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain adh_short PF00106.25 ORF63055 - 9.4e-30 103.5 0.0 1.2e-29 103.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF63055 - 1.7e-19 70.3 0.0 2.2e-19 69.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase 3HCDH_N PF02737.18 ORF63055 - 0.0022 17.9 0.1 0.0036 17.2 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 ORF63055 - 0.004 16.8 0.0 0.0062 16.1 0.0 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KR PF08659.10 ORF63055 - 0.075 12.9 0.1 0.29 11.0 0.0 1.9 2 0 0 2 2 2 0 KR domain NAD_Gly3P_dh_N PF01210.23 ORF63055 - 0.075 13.0 0.2 0.15 12.0 0.2 1.5 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 ORF63055 - 0.11 12.2 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 ORF63055 - 0.13 12.4 0.0 0.21 11.8 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase LRR_4 PF12799.7 ORF55375 - 3.8e-46 154.3 41.7 4.7e-08 33.2 0.5 6.7 1 1 8 10 10 10 9 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF55375 - 1.1e-32 111.6 43.9 3.3e-13 49.2 1.8 5.1 2 1 4 6 6 6 6 Leucine rich repeat LRR_9 PF14580.6 ORF55375 - 1.2e-20 73.8 10.7 9.7e-07 28.5 0.2 4.4 1 1 3 4 4 4 4 Leucine-rich repeat LRR_1 PF00560.33 ORF55375 - 9.7e-10 37.6 17.8 1.4 9.8 0.1 9.4 10 0 0 10 10 10 3 Leucine Rich Repeat LRR_6 PF13516.6 ORF55375 - 4.9e-05 23.0 20.3 0.083 13.0 0.3 9.1 10 0 0 10 10 10 1 Leucine Rich repeat FTH PF01827.27 ORF55375 - 0.02 14.7 1.6 0.045 13.5 0.6 2.1 2 0 0 2 2 2 0 FTH domain SERTA PF06031.13 ORF55375 - 0.097 12.4 1.7 3.2 7.5 0.2 3.4 3 0 0 3 3 3 0 SERTA motif S_4TM PF18159.1 ORF5444 - 0.21 10.9 0.4 0.34 10.2 0.4 1.3 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain RNase_H2_suC PF08615.11 ORF53892 - 0.068 13.4 2.2 0.091 12.9 2.2 1.2 1 0 0 1 1 1 0 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) US6 PF17616.2 ORF53892 - 0.37 10.7 1.8 3.2 7.7 0.4 2.7 3 0 0 3 3 3 0 Viral unique short region 6 HicB-like_2 PF15970.5 ORF53892 - 4.3 7.6 9.0 0.45 10.7 3.4 2.1 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system Rhomboid PF01694.22 ORF51156 - 3e-07 30.6 13.6 5.7e-07 29.7 13.6 1.5 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 ORF51156 - 0.0089 16.6 10.0 0.0089 16.6 10.0 2.8 1 1 2 3 3 3 1 Eukaryotic integral membrane protein (DUF1751) SNAP PF14938.6 ORF49352 - 1.7e-74 250.8 14.6 1.9e-74 250.6 14.6 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP Spatacsin_C PF14649.6 ORF49352 - 3.8e-05 22.9 6.2 0.00023 20.4 1.5 2.2 1 1 0 2 2 2 2 Spatacsin C-terminus OSCP PF00213.18 ORF49352 - 0.0049 17.0 0.3 1.6 8.8 0.0 2.6 2 1 0 2 2 2 2 ATP synthase delta (OSCP) subunit DHR-2 PF06920.13 ORF49352 - 0.007 15.1 2.7 0.007 15.1 2.7 2.1 2 1 0 2 2 2 1 Dock homology region 2 TPR_12 PF13424.6 ORF49352 - 0.0078 16.5 7.5 0.62 10.4 0.1 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat Turandot PF07240.11 ORF49352 - 0.023 14.7 1.8 0.32 11.0 0.3 2.8 2 1 1 3 3 3 0 Stress-inducible humoral factor Turandot TPR_10 PF13374.6 ORF49352 - 0.41 10.6 9.5 3.3 7.7 0.1 4.4 3 1 2 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF49352 - 2.3 9.0 6.9 89 4.1 0.1 4.4 3 1 1 4 4 4 0 Tetratricopeptide repeat NSF PF02071.20 ORF49352 - 4.6 8.4 16.6 5.5 8.2 1.5 5.1 6 0 0 6 6 6 0 Aromatic-di-Alanine (AdAR) repeat SBDS_C PF09377.10 ORF44305 - 1.6e-22 79.7 1.8 1.6e-22 79.7 1.8 1.8 2 0 0 2 2 2 1 SBDS protein C-terminal domain zf-C2H2_jaz PF12171.8 ORF44305 - 0.00095 19.4 1.0 0.0024 18.1 1.0 1.7 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding EIF_2_alpha PF07541.12 ORF44305 - 0.025 14.7 0.1 0.025 14.7 0.1 2.1 2 1 0 2 2 2 0 Eukaryotic translation initiation factor 2 alpha subunit PI3K_rbd PF00794.18 ORF44305 - 0.029 14.5 0.1 0.087 13.0 0.1 1.8 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain zf-C2H2_4 PF13894.6 ORF44305 - 0.15 13.0 0.1 0.31 12.0 0.1 1.6 1 0 0 1 1 1 0 C2H2-type zinc finger AAA_16 PF13191.6 ORF44305 - 0.16 12.4 0.0 0.32 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 ORF44305 - 0.56 10.7 3.3 0.43 11.1 1.2 2.1 1 1 1 2 2 2 0 ABC transporter Complex1_LYR_2 PF13233.6 ORF44184 - 0.42 11.4 4.4 41 5.0 4.5 2.6 1 1 0 1 1 1 0 Complex1_LYR-like 2OG-FeII_Oxy_3 PF13640.6 ORF43740 - 5.5e-18 65.7 1.2 9e-18 65.0 0.0 2.0 3 0 0 3 3 3 1 2OG-Fe(II) oxygenase superfamily zf-MYND PF01753.18 ORF41738 - 2.1e-08 34.1 14.4 2.1e-08 34.1 14.4 3.3 2 1 0 2 2 2 1 MYND finger CRAL_TRIO PF00650.20 ORF31734 - 4.5e-28 98.0 0.6 7.6e-28 97.2 0.6 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF31734 - 1.5e-13 51.1 0.1 2.2e-13 50.5 0.1 1.2 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain CRAL_TRIO_N PF03765.15 ORF31734 - 9e-05 22.6 1.2 0.00017 21.7 0.2 2.1 2 0 0 2 2 2 1 CRAL/TRIO, N-terminal domain Baculo_LEF5 PF04838.12 ORF31734 - 0.0042 17.1 0.8 0.0099 15.9 0.8 1.6 1 0 0 1 1 1 1 Baculoviridae late expression factor 5 SSF PF00474.17 ORF2800 - 1.7e-17 63.4 1.8 1.7e-17 63.4 1.8 1.9 2 0 0 2 2 2 1 Sodium:solute symporter family Polysacc_synt_C PF14667.6 ORF2800 - 0.012 15.7 0.5 0.012 15.7 0.5 3.3 2 1 1 3 3 3 0 Polysaccharide biosynthesis C-terminal domain CcmD PF04995.14 ORF2800 - 0.016 15.3 0.1 0.073 13.2 0.1 2.2 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) GHMP_kinases_N PF00288.26 ORF27792 - 3.4e-14 52.8 0.3 8.2e-14 51.6 0.3 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 ORF27792 - 1.3e-10 41.5 0.7 5.2e-10 39.6 0.0 2.3 3 0 0 3 3 3 1 GHMP kinases C terminal Peptidase_C26 PF07722.13 ORF22972 - 1.3e-05 25.1 0.0 2.6e-05 24.1 0.0 1.5 2 0 0 2 2 2 1 Peptidase C26 STIMATE PF12400.8 ORF20489 - 1e-14 55.2 9.2 1e-14 55.2 9.2 2.0 2 0 0 2 2 2 1 STIMATE family EOS1 PF12326.8 ORF20489 - 0.01 15.8 0.1 0.01 15.8 0.1 2.2 2 0 0 2 2 2 1 N-glycosylation protein Helicase_C_4 PF13871.6 ORF151199 - 0.059 13.0 2.9 0.074 12.7 2.1 1.4 1 1 0 1 1 1 0 C-terminal domain on Strawberry notch homologue Elf4 PF07011.11 ORF151199 - 1 9.3 8.0 0.44 10.5 1.6 2.4 1 1 1 2 2 2 0 Early Flowering 4 domain Aldo_ket_red PF00248.21 ORF14933 - 1.5e-41 142.5 0.1 4.4e-41 141.0 0.1 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family Pinin_SDK_memA PF04696.13 ORF148704 - 2e-19 69.9 14.3 2e-19 69.9 14.3 3.6 2 1 2 4 4 4 1 pinin/SDK/memA/ protein conserved region cNMP_binding PF00027.29 ORF146859 - 1.9e-13 50.3 0.1 1.6e-10 40.9 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain SH3_3 PF08239.11 ORF141112 - 1.5e-08 34.8 0.2 7.2e-07 29.4 0.1 2.7 3 0 0 3 3 3 1 Bacterial SH3 domain SH3_4 PF06347.13 ORF141112 - 0.00037 20.3 0.9 0.034 14.0 0.3 3.3 3 1 0 3 3 3 1 Bacterial SH3 domain SH3_9 PF14604.6 ORF141112 - 0.0077 16.1 0.2 2.5 8.0 0.1 2.5 2 0 0 2 2 2 2 Variant SH3 domain Pkinase PF00069.25 ORF137838 - 3.6e-50 170.8 1.3 4.6e-50 170.4 1.3 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF137838 - 1.3e-30 106.6 0.3 1.6e-30 106.3 0.3 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF137838 - 1e-06 28.3 0.0 9.5e-06 25.1 0.0 2.1 1 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF137838 - 0.00015 21.2 0.1 0.0003 20.2 0.1 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF137838 - 0.00043 19.2 1.0 0.00066 18.6 1.0 1.3 1 1 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF137838 - 0.0011 19.0 0.0 0.0059 16.6 0.0 1.9 1 1 0 2 2 2 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF137838 - 0.0072 15.3 2.7 0.18 10.7 2.7 2.1 1 1 0 1 1 1 1 Haspin like kinase domain Choline_kinase PF01633.20 ORF137838 - 0.0098 15.5 0.3 0.027 14.1 0.2 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase RIO1 PF01163.22 ORF137838 - 0.01 15.5 0.4 0.029 14.0 0.4 1.7 1 1 0 1 1 1 0 RIO1 family Sec8_exocyst PF04048.14 ORF137838 - 0.037 13.9 0.4 0.072 13.0 0.4 1.5 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain TRAM_LAG1_CLN8 PF03798.16 ORF137025 - 7.7e-09 35.6 16.5 7.7e-09 35.6 16.5 2.6 2 1 1 3 3 3 2 TLC domain BPD_transp_1 PF00528.22 ORF137025 - 0.26 11.0 4.3 0.066 12.9 0.7 1.8 2 0 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component Pkinase PF00069.25 ORF12926 - 1e-78 264.3 0.0 1.2e-78 264.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF12926 - 1.9e-36 125.7 0.0 2.3e-36 125.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF12926 - 2.6e-05 23.7 0.0 0.0061 15.9 0.0 2.2 2 0 0 2 2 2 2 Kinase-like Haspin_kinase PF12330.8 ORF12926 - 0.00018 20.6 0.0 0.00062 18.8 0.0 1.8 1 1 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF12926 - 0.0068 16.3 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF12926 - 0.013 14.6 0.0 0.022 13.8 0.0 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 Kdo PF06293.14 ORF12926 - 0.047 13.1 0.1 0.1 11.9 0.1 1.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family PS_Dcarbxylase PF02666.15 ORF128462 - 4.1e-53 179.9 0.0 5.6e-53 179.5 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase Ion_trans PF00520.31 ORF127143 - 9.6e-05 21.7 4.6 0.00014 21.2 4.6 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF127143 - 0.054 13.4 0.0 0.17 11.9 0.0 1.8 1 0 0 1 1 1 0 EF-hand domain Cg6151-P PF10233.9 ORF127143 - 0.079 13.3 2.7 5.7 7.3 0.2 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein CG6151-P Phage_holin_3_6 PF07332.11 ORF127143 - 1.4 9.0 10.2 3.5 7.7 0.3 2.6 3 0 0 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III DUF2207 PF09972.9 ORF127143 - 4.8 5.8 5.7 8.4 5.0 5.6 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DOMON PF03351.17 ORF126740 - 3.1e-10 40.3 0.0 4.4e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 DOMON domain Abhydrolase_6 PF12697.7 ORF123979 - 3.9e-18 66.9 4.1 5e-18 66.5 4.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF123979 - 3.3e-10 40.0 1.9 6.6e-10 39.1 1.9 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF123979 - 2.6e-07 30.2 0.0 3.9e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 ORF123979 - 1.2e-05 25.5 0.1 0.00067 19.8 0.0 2.2 2 0 0 2 2 2 1 Thioesterase domain Lipase_3 PF01764.25 ORF123979 - 0.0073 16.2 0.0 0.016 15.0 0.0 1.6 1 0 0 1 1 1 1 Lipase (class 3) Peptidase_S49_N PF08496.10 ORF117604 - 4.8e-20 72.2 0.0 7.3e-20 71.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 N-terminal Peptidase_S49 PF01343.18 ORF117604 - 1e-16 61.3 0.0 1.6e-16 60.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S49 CLP_protease PF00574.23 ORF117604 - 0.00052 20.0 0.0 0.00077 19.4 0.0 1.3 1 0 0 1 1 1 1 Clp protease SDH_sah PF01972.16 ORF117604 - 0.043 12.8 0.0 0.062 12.3 0.0 1.2 1 0 0 1 1 1 0 Serine dehydrogenase proteinase DsrD PF08679.11 ORF117604 - 0.097 12.9 0.1 0.22 11.8 0.1 1.5 1 0 0 1 1 1 0 Dissimilatory sulfite reductase D (DsrD) RCC1 PF00415.18 ORF115889 - 4.1e-44 149.0 16.7 2.3e-13 50.5 0.0 7.1 6 2 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF115889 - 7.8e-33 111.6 20.5 6.7e-08 32.1 0.3 5.6 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF4213 PF13938.6 ORF115889 - 0.046 14.0 1.1 25 5.2 0.0 3.9 4 1 1 5 5 5 0 Putative heavy-metal chelation Beta_helix_2 PF18835.1 ORF115889 - 0.056 13.2 0.0 0.22 11.3 0.0 2.0 2 0 0 2 2 2 0 Beta helix repeat of Inulin fructotransferase Fungal_trans PF04082.18 ORF114792 - 0.31 10.0 1.2 0.56 9.2 1.2 1.4 1 0 0 1 1 1 0 Fungal specific transcription factor domain PARP PF00644.20 ORF11423 - 9.5e-07 28.6 0.0 1.8e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain PTS_2-RNA PF01885.16 ORF11423 - 0.14 12.2 0.0 0.18 11.9 0.0 1.2 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family DiS_P_DiS PF06750.13 ORF110094 - 3.4e-34 116.8 0.4 5.9e-34 116.0 0.4 1.4 1 0 0 1 1 1 1 Bacterial Peptidase A24 N-terminal domain Peptidase_A24 PF01478.18 ORF110094 - 3.9e-19 69.0 11.3 3.9e-19 69.0 11.3 2.0 2 1 0 2 2 2 1 Type IV leader peptidase family DUF2039 PF10217.9 ORF110094 - 0.07 13.5 0.1 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) cNMP_binding PF00027.29 ORF104417 - 1.9e-13 50.3 0.1 1.6e-10 40.9 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain EamA PF00892.20 ORF102492 - 2e-10 41.0 13.4 1.1e-05 25.6 2.3 2.2 2 0 0 2 2 2 2 EamA-like transporter family DMT_6 PF04342.12 ORF102492 - 0.16 12.2 1.9 1.1 9.5 0.2 2.3 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) TMEM234 PF10639.9 ORF102492 - 2 8.5 6.0 2.8 8.0 0.5 2.5 3 0 0 3 3 3 0 Putative transmembrane family 234 Pinin_SDK_memA PF04696.13 ORF101256 - 2e-19 69.9 14.3 2e-19 69.9 14.3 3.6 2 1 2 4 4 4 1 pinin/SDK/memA/ protein conserved region DUF218 PF02698.17 NODE_21909_length_925_cov_109.915730_g16908_i0reverse_frame_1 - 2.4e-09 37.3 0.0 3.6e-09 36.7 0.0 1.3 1 0 0 1 1 1 1 DUF218 domain DUF3022 PF11226.8 NODE_21909_length_925_cov_109.915730_g16908_i0reverse_frame_1 - 0.028 14.9 0.3 0.053 14.0 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3022) Rhodanese_C PF12368.8 NODE_21906_length_925_cov_137.332584_g16905_i0reverse_frame_1 - 1e-11 45.0 6.7 1e-11 45.0 6.7 1.9 2 0 0 2 2 2 1 Rhodanase C-terminal Rhodanese PF00581.20 NODE_21906_length_925_cov_137.332584_g16905_i0reverse_frame_1 - 1.8e-05 25.2 0.0 4e-05 24.1 0.0 1.6 1 1 0 1 1 1 1 Rhodanese-like domain GCM PF03615.15 NODE_21875_length_926_cov_78.341190_g16878_i0reverse_frame_1 - 2.3 8.1 6.2 5.9 6.8 0.8 2.3 2 0 0 2 2 2 0 GCM motif protein DUF4806 PF16064.5 NODE_21874_length_926_cov_86.740741_g16877_i0forward_frame_1 - 0.32 11.3 4.4 0.22 11.8 1.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4806) SMYLE_N PF18615.1 NODE_21813_length_927_cov_2614.867713_g15768_i2forward_frame_1 - 0.19 11.3 0.9 0.26 10.8 0.9 1.1 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain DUF1664 PF07889.12 NODE_21798_length_928_cov_94.267637_g16808_i0forward_frame_3 - 0.014 15.4 2.2 2.2 8.3 2.2 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) NPV_P10 PF05531.12 NODE_21798_length_928_cov_94.267637_g16808_i0forward_frame_3 - 0.02 15.4 3.5 0.028 14.9 0.4 2.5 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Fzo_mitofusin PF04799.13 NODE_21798_length_928_cov_94.267637_g16808_i0forward_frame_3 - 0.064 12.8 0.4 0.87 9.1 0.1 2.2 1 1 1 2 2 2 0 fzo-like conserved region Img2 PF05046.14 NODE_21793_length_928_cov_165.057111_g16804_i0reverse_frame_3 - 3 8.2 7.4 27 5.2 0.9 2.9 1 1 1 2 2 2 0 Mitochondrial large subunit ribosomal protein (Img2) YycC PF14174.6 NODE_21793_length_928_cov_165.057111_g16804_i0reverse_frame_3 - 3.1 7.7 7.2 22 5.0 0.7 3.2 2 0 0 2 2 2 0 YycC-like protein MatP PF06303.12 NODE_21793_length_928_cov_165.057111_g16804_i0reverse_frame_3 - 4.1 8.0 12.8 1.3 9.7 2.7 3.6 2 1 2 4 4 4 0 MatP N-terminal domain Adeno_E1B_55K_N PF04623.12 NODE_21762_length_929_cov_111.168904_g16775_i0reverse_frame_3 - 0.57 10.9 9.1 5.5 7.8 0.2 3.8 3 1 1 4 4 4 0 Adenovirus E1B protein N-terminus SAM_1 PF00536.30 NODE_21762_length_929_cov_111.168904_g16775_i0reverse_frame_2 - 7.8e-05 23.0 0.0 0.00012 22.4 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 NODE_21762_length_929_cov_111.168904_g16775_i0reverse_frame_2 - 0.00081 19.4 0.0 0.0013 18.8 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) DUF3173 PF11372.8 NODE_21762_length_929_cov_111.168904_g16775_i0reverse_frame_2 - 0.094 12.6 0.0 0.23 11.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3173) STAT_alpha PF01017.20 NODE_21732_length_930_cov_3.282682_g16751_i0forward_frame_2 - 0.93 9.4 4.7 0.58 10.0 1.9 2.2 2 1 0 2 2 2 0 STAT protein, all-alpha domain PEGSRP PF07623.11 ORF97431 - 2 8.3 7.7 1.1 9.2 0.2 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1584) cNMP_binding PF00027.29 ORF94637 - 6.5e-19 67.8 0.0 7.1e-05 22.8 0.0 3.8 4 0 0 4 4 4 3 Cyclic nucleotide-binding domain PQQ_3 PF13570.6 ORF92782 - 0.07 13.6 0.1 8 7.1 0.0 2.9 2 0 0 2 2 2 0 PQQ-like domain P2X_receptor PF00864.19 ORF90145 - 1.9e-20 73.3 5.8 1.8e-18 66.8 5.8 2.8 1 1 0 1 1 1 1 ATP P2X receptor Sulf_transp PF04143.14 ORF88474 - 9e-13 48.5 3.1 9e-13 48.5 3.1 3.1 3 0 0 3 3 3 3 Sulphur transport Aldo_ket_red PF00248.21 ORF87188 - 1.9e-54 184.9 0.0 2.7e-54 184.4 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family MBG PF17883.1 ORF87188 - 0.00092 19.8 0.0 0.0016 19.0 0.0 1.3 1 0 0 1 1 1 1 MBG domain MlaE PF02405.16 ORF84710 - 1.2e-72 244.0 17.4 1.6e-72 243.7 17.4 1.1 1 0 0 1 1 1 1 Permease MlaE uDENN PF03456.18 ORF83485 - 0.00036 21.2 2.4 0.00052 20.7 0.2 2.2 2 0 0 2 2 2 1 uDENN domain Chordopox_A13L PF05961.11 ORF83485 - 0.027 14.7 2.1 0.1 12.9 0.2 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein DENN PF02141.21 ORF83485 - 0.04 13.9 0.4 0.11 12.4 0.3 1.8 1 1 0 1 1 1 0 DENN (AEX-3) domain DUF1778 PF08681.11 ORF81574 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1778) CTD_bind PF04818.13 ORF80521 - 0.8 10.6 5.6 0.86 10.5 0.5 3.3 4 0 0 4 4 4 0 RNA polymerase II-binding domain. ABC2_membrane_3 PF12698.7 ORF79876 - 3.3e-09 36.3 0.4 5.1e-09 35.7 0.4 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein Pkinase PF00069.25 ORF79477 - 7.3e-61 205.8 0.4 8.5e-61 205.6 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF79477 - 2.2e-29 102.5 0.1 3e-29 102.1 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF79477 - 7.7e-07 28.7 0.0 1.7e-05 24.3 0.0 2.1 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF79477 - 0.00027 20.3 0.0 0.00042 19.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF79477 - 0.00031 20.4 0.1 0.034 13.8 0.0 2.2 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF79477 - 0.0033 16.3 0.2 0.096 11.4 0.0 2.1 2 0 0 2 2 2 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF79477 - 0.0077 15.2 0.4 0.015 14.3 0.4 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Phi29_Phage_SSB PF17427.2 ORF79477 - 0.081 13.1 0.2 0.14 12.4 0.2 1.3 1 0 0 1 1 1 0 Phage Single-stranded DNA-binding protein APH PF01636.23 ORF79477 - 0.17 11.7 0.0 0.98 9.3 0.0 1.9 1 1 0 2 2 2 0 Phosphotransferase enzyme family DUF4201 PF13870.6 ORF78456 - 9.2e-33 113.4 35.4 9.2e-33 113.4 35.4 3.1 2 1 1 3 3 3 1 Domain of unknown function (DUF4201) Fe-ADH PF00465.19 ORF78456 - 0.021 13.7 0.0 0.038 12.8 0.0 1.4 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase DivIC PF04977.15 ORF78456 - 0.037 13.8 1.1 0.037 13.8 1.1 5.8 3 1 1 5 5 5 0 Septum formation initiator DUF2205 PF10224.9 ORF78456 - 0.087 12.8 0.2 0.087 12.8 0.2 4.5 5 0 0 5 5 5 0 Short coiled-coil protein WXG100 PF06013.12 ORF78456 - 5.4 7.3 12.2 25 5.2 1.3 4.5 3 2 1 4 4 4 0 Proteins of 100 residues with WXG CLN3 PF02487.17 ORF72699 - 1.5e-14 53.8 8.3 2.1e-14 53.4 8.3 1.1 1 0 0 1 1 1 1 CLN3 protein DUF2987 PF11205.8 ORF71867 - 0.091 12.7 1.7 4.5 7.2 0.4 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF71867 - 4.9 7.6 9.6 3.5 8.1 0.3 4.1 4 1 0 4 4 4 0 Phage protein Gp68 Trypan_PARP PF05887.11 ORF71867 - 5.9 6.9 8.1 7.6 6.5 7.5 1.4 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) CobW_C PF07683.14 ORF71280 - 9.1e-17 60.8 0.0 1.6e-16 60.0 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain cobW PF02492.19 ORF71280 - 5.6e-09 35.8 0.0 1e-08 35.0 0.0 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain DUF2946 PF11162.8 ORF71280 - 0.35 11.5 5.0 1.1 9.9 5.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) RCC1 PF00415.18 ORF70186 - 9.1e-11 42.2 0.2 0.00086 19.9 0.1 5.0 5 1 0 5 5 5 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF70186 - 7.7e-10 38.3 1.2 2.7e-05 23.8 0.0 3.8 5 0 0 5 5 5 2 Regulator of chromosome condensation (RCC1) repeat NHL PF01436.21 ORF69484 - 2.6e-27 93.4 4.4 4.5e-08 32.7 0.2 5.3 5 0 0 5 5 5 5 NHL repeat SGL PF08450.12 ORF69484 - 0.0015 18.1 0.0 0.012 15.3 0.0 2.0 1 1 1 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 ORF69484 - 0.013 15.6 0.0 42 4.3 0.0 3.8 3 1 1 4 4 4 0 Strictosidine synthase Sulf_transp PF04143.14 ORF69077 - 5.8e-13 49.1 2.3 5.8e-13 49.1 2.3 3.1 3 0 0 3 3 3 3 Sulphur transport ATP_bind_2 PF03668.15 ORF66749 - 3.4e-147 489.2 0.0 3.9e-147 489.0 0.0 1.0 1 0 0 1 1 1 1 P-loop ATPase protein family AAA_28 PF13521.6 ORF66749 - 0.034 14.4 0.0 0.047 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF66749 - 0.036 14.6 0.0 0.51 10.9 0.0 2.6 2 1 0 2 2 2 0 AAA domain CPT PF07931.12 ORF66749 - 0.067 13.0 0.0 1.8 8.4 0.0 2.2 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_16 PF13191.6 ORF66749 - 0.087 13.2 0.1 0.2 12.0 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain FtsK_SpoIIIE PF01580.18 ORF66749 - 0.12 11.7 1.3 0.15 11.4 0.2 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family Zeta_toxin PF06414.12 ORF66749 - 0.16 11.2 0.0 0.3 10.3 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.6 ORF66749 - 0.17 12.0 0.0 0.6 10.3 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF66749 - 0.18 12.1 0.1 0.4 11.0 0.0 1.9 1 1 0 1 1 1 0 AAA domain MORN PF02493.20 ORF63419 - 2.3e-18 64.9 22.6 5.6e-08 32.2 0.3 5.6 5 0 0 5 5 5 4 MORN repeat DUF3048_C PF17479.2 ORF63419 - 0.15 12.4 5.8 0.33 11.3 0.8 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain MORN PF02493.20 ORF61541 - 2.4e-39 130.9 61.1 4.1e-09 35.8 0.6 10.7 10 1 0 10 10 10 9 MORN repeat DUF3048_C PF17479.2 ORF61541 - 0.035 14.5 14.0 5 7.5 0.0 3.9 2 1 0 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain FTR PF01913.18 ORF61541 - 0.16 11.9 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase DUF4795 PF16043.5 ORF52020 - 0.00022 20.9 34.1 0.036 13.7 2.6 3.8 1 1 2 4 4 4 2 Domain of unknown function (DUF4795) TMF_TATA_bd PF12325.8 ORF52020 - 0.00024 21.3 18.7 0.15 12.2 6.5 4.2 4 0 0 4 4 4 1 TATA element modulatory factor 1 TATA binding EzrA PF06160.12 ORF52020 - 0.00045 18.5 22.0 0.0018 16.6 1.7 3.6 3 1 0 3 3 3 2 Septation ring formation regulator, EzrA PhaP_Bmeg PF09602.10 ORF52020 - 0.0037 17.2 13.9 0.044 13.7 5.5 3.4 2 1 1 3 3 3 1 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) SHE3 PF17078.5 ORF52020 - 0.0057 16.4 18.8 0.1 12.3 10.8 2.4 2 0 0 2 2 2 2 SWI5-dependent HO expression protein 3 LPP PF04728.13 ORF52020 - 0.0094 16.3 10.6 10 6.6 0.0 5.7 4 1 1 5 5 5 0 Lipoprotein leucine-zipper PLU-1 PF08429.11 ORF52020 - 0.014 14.6 6.7 0.34 10.0 6.6 2.4 1 1 0 1 1 1 0 PLU-1-like protein Fez1 PF06818.15 ORF52020 - 0.021 15.3 12.1 1.3 9.4 0.7 2.4 1 1 1 2 2 2 0 Fez1 RNA_pol_A_CTD PF03118.15 ORF52020 - 0.023 14.4 3.9 0.048 13.4 0.5 3.4 3 0 0 3 3 2 0 Bacterial RNA polymerase, alpha chain C terminal domain DUF2730 PF10805.8 ORF52020 - 0.023 14.8 17.6 1.1 9.4 1.6 5.2 3 1 2 5 5 5 0 Protein of unknown function (DUF2730) Baculo_PEP_C PF04513.12 ORF52020 - 0.024 14.7 14.8 1.7 8.7 1.1 4.4 2 2 2 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus SRP_SPB PF02978.19 ORF52020 - 0.026 15.1 1.1 0.1 13.2 0.2 2.5 1 1 0 2 2 1 0 Signal peptide binding domain TSC22 PF01166.18 ORF52020 - 0.033 14.5 2.5 0.033 14.5 2.5 5.9 6 1 2 8 8 6 0 TSC-22/dip/bun family Allexi_40kDa PF05549.11 ORF52020 - 0.04 13.4 9.6 1.7 8.1 0.1 3.3 1 1 3 4 4 4 0 Allexivirus 40kDa protein DUF2935 PF11155.8 ORF52020 - 0.048 14.0 0.1 3.1 8.1 0.1 2.9 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) NPV_P10 PF05531.12 ORF52020 - 0.094 13.2 21.7 15 6.1 2.1 5.8 2 2 2 4 4 4 0 Nucleopolyhedrovirus P10 protein Spectrin PF00435.21 ORF52020 - 0.099 13.1 15.3 0.42 11.1 0.6 4.6 2 2 3 5 5 5 0 Spectrin repeat FlaC_arch PF05377.11 ORF52020 - 0.1 13.0 20.6 2 8.9 0.3 6.5 4 2 1 5 5 5 0 Flagella accessory protein C (FlaC) BLOC1_2 PF10046.9 ORF52020 - 0.11 12.8 23.0 5.7 7.3 0.7 5.8 3 2 3 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Prominin PF05478.11 ORF52020 - 0.11 10.4 8.6 1.6 6.6 4.0 2.6 1 1 2 3 3 3 0 Prominin Seryl_tRNA_N PF02403.22 ORF52020 - 0.15 12.3 29.1 0.57 10.4 8.9 4.5 1 1 3 4 4 4 0 Seryl-tRNA synthetase N-terminal domain CENP-F_leu_zip PF10473.9 ORF52020 - 0.2 11.7 27.4 1.3 9.1 9.9 4.7 1 1 3 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 COG7 PF10191.9 ORF52020 - 0.22 9.7 3.4 0.31 9.2 2.6 1.6 1 1 0 1 1 1 0 Golgi complex component 7 (COG7) Gp-FAR-1 PF05823.12 ORF52020 - 0.26 11.6 15.2 0.55 10.6 0.2 3.9 2 2 2 4 4 4 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Fib_alpha PF08702.10 ORF52020 - 0.28 11.4 16.7 0.56 10.4 4.9 3.9 2 2 1 3 3 3 0 Fibrinogen alpha/beta chain family YscO PF07321.12 ORF52020 - 0.29 11.1 6.1 0.24 11.3 2.1 2.8 3 0 0 3 3 3 0 Type III secretion protein YscO ABC_tran_CTD PF16326.5 ORF52020 - 0.31 11.3 23.9 1.1 9.5 0.2 5.0 4 2 1 5 5 5 0 ABC transporter C-terminal domain Wx5_PLAF3D7 PF09688.10 ORF52020 - 0.31 11.0 6.2 0.22 11.5 2.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (Wx5_PLAF3D7) YlbD_coat PF14071.6 ORF52020 - 0.37 11.0 17.5 0.57 10.4 5.7 4.2 3 1 1 4 4 4 0 Putative coat protein DUF4407 PF14362.6 ORF52020 - 0.41 10.0 10.4 17 4.6 10.3 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF52020 - 0.51 11.0 14.2 2.2 8.9 0.1 5.4 5 2 2 7 7 5 0 SlyX COMPASS-Shg1 PF05205.12 ORF52020 - 0.61 10.8 13.0 0.9 10.3 2.4 3.3 3 0 0 3 3 3 0 COMPASS (Complex proteins associated with Set1p) component shg1 MscS_porin PF12795.7 ORF52020 - 0.69 9.4 14.7 0.065 12.8 2.1 3.5 3 1 0 4 4 4 0 Mechanosensitive ion channel porin domain Spc7 PF08317.11 ORF52020 - 0.82 8.5 24.3 0.88 8.4 0.9 3.3 2 2 0 3 3 3 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 ORF52020 - 0.9 9.1 8.0 44 3.5 8.0 2.5 1 1 0 1 1 1 0 Exonuclease VII, large subunit ECH_2 PF16113.5 ORF52020 - 1 8.8 6.6 5.1 6.5 1.8 2.6 2 1 1 3 3 3 0 Enoyl-CoA hydratase/isomerase Com_YlbF PF06133.11 ORF52020 - 1.3 9.7 19.9 0.85 10.3 0.5 3.8 2 1 1 3 3 3 0 Control of competence regulator ComK, YlbF/YmcA DUF948 PF06103.11 ORF52020 - 1.7 9.0 14.2 5.2 7.4 3.5 4.7 3 1 2 5 5 5 0 Bacterial protein of unknown function (DUF948) DUF5082 PF16888.5 ORF52020 - 2 8.7 19.2 6.9 7.0 0.2 5.3 3 2 1 5 5 5 0 Domain of unknown function (DUF5082) FemAB PF02388.16 ORF52020 - 2.3 7.0 13.1 0.33 9.8 3.4 3.0 3 1 1 4 4 4 0 FemAB family TMPIT PF07851.13 ORF52020 - 2.4 7.3 12.2 2.4 7.3 5.9 2.9 1 1 2 3 3 3 0 TMPIT-like protein Prefoldin PF02996.17 ORF52020 - 2.5 8.0 24.0 0.23 11.4 1.5 6.7 6 2 1 7 7 7 0 Prefoldin subunit DUF2203 PF09969.9 ORF52020 - 2.7 8.7 12.0 2.4 8.9 2.6 3.5 2 2 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) ISG65-75 PF11727.8 ORF52020 - 3.1 6.9 12.2 0.26 10.5 5.8 2.3 2 1 0 2 2 2 0 Invariant surface glycoprotein HSBP1 PF06825.12 ORF52020 - 3.2 7.7 22.9 2.3 8.2 0.9 6.1 7 1 0 7 7 5 0 Heat shock factor binding protein 1 DUF4140 PF13600.6 ORF52020 - 4.1 7.9 11.7 75 3.9 0.3 4.7 2 2 2 4 4 4 0 N-terminal domain of unknown function (DUF4140) MctB PF11382.8 ORF52020 - 4.6 6.9 6.4 4.6 6.9 4.4 2.1 1 1 1 2 2 2 0 Copper transport outer membrane protein, MctB DUF3158 PF11358.8 ORF52020 - 4.9 6.9 6.1 1.5 8.5 0.4 2.8 3 1 1 4 4 4 0 Protein of unknown function (DUF3158) DASH_Dad3 PF08656.10 ORF52020 - 5.8 7.1 9.4 11 6.2 1.4 4.6 2 2 2 4 4 4 0 DASH complex subunit Dad3 IZUMO PF15005.6 ORF52020 - 6.4 7.3 9.3 9.1 6.8 0.4 3.3 2 1 0 3 3 3 0 Izumo sperm-egg fusion, Ig domain-associated MORN PF02493.20 ORF51635 - 9.5e-60 195.1 67.6 9.2e-08 31.5 0.4 10.2 10 0 0 10 10 10 10 MORN repeat DUF3818 PF12825.7 ORF51635 - 0.34 9.9 2.5 0.46 9.4 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function in PX-proteins (DUF3818) ID PF18543.1 ORF51635 - 0.62 10.1 7.0 69 3.6 0.1 5.4 5 1 1 6 6 6 0 Intracellular delivery domain AAA_5 PF07728.14 ORF51264 - 0.11 12.5 0.1 6.3 6.8 0.1 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Gly_acyl_tr_N PF06021.11 ORF51264 - 0.12 12.4 5.1 3.7 7.6 3.8 2.3 2 0 0 2 2 2 0 Aralkyl acyl-CoA:amino acid N-acyltransferase DUF4407 PF14362.6 ORF51264 - 0.77 9.1 3.3 1 8.6 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1041 PF06292.17 ORF51264 - 8.3 6.9 9.5 28 5.2 6.1 2.5 1 1 1 2 2 2 0 Domain of Unknown Function (DUF1041) Hydrolase_6 PF13344.6 ORF48142 - 8.6e-26 90.0 0.0 5.1e-25 87.5 0.0 2.0 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF48142 - 9.8e-19 67.2 0.0 1.3e-17 63.6 0.0 2.2 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase PF00702.26 ORF48142 - 4e-08 33.8 0.0 1e-06 29.2 0.0 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 ORF48142 - 5.4e-08 33.1 0.0 4.3e-05 23.7 0.0 2.3 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 ORF48142 - 0.00031 20.4 0.0 0.0011 18.7 0.0 1.8 2 0 0 2 2 2 1 Mitochondrial PGP phosphatase Acid_phosphat_B PF03767.14 ORF48142 - 0.15 11.6 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 HAD superfamily, subfamily IIIB (Acid phosphatase) KIND PF16474.5 ORF47624 - 0.13 12.2 0.1 0.2 11.5 0.1 1.2 1 0 0 1 1 1 0 Kinase non-catalytic C-lobe domain PMSR PF01625.21 ORF46158 - 3.6e-58 196.1 0.4 5.4e-58 195.5 0.4 1.3 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase MORN PF02493.20 ORF44004 - 9.5e-60 195.1 67.6 9.2e-08 31.5 0.4 10.2 10 0 0 10 10 10 10 MORN repeat DUF3818 PF12825.7 ORF44004 - 0.34 9.9 2.5 0.46 9.4 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function in PX-proteins (DUF3818) ID PF18543.1 ORF44004 - 0.62 10.1 7.0 69 3.6 0.1 5.4 5 1 1 6 6 6 0 Intracellular delivery domain DUF2987 PF11205.8 ORF440 - 0.091 12.7 1.7 4.5 7.2 0.4 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF440 - 4.9 7.6 9.6 3.5 8.1 0.3 4.1 4 1 0 4 4 4 0 Phage protein Gp68 Trypan_PARP PF05887.11 ORF440 - 5.9 6.9 8.1 7.6 6.5 7.5 1.4 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) FMN_dh PF01070.18 ORF38577 - 2.4e-77 260.3 0.4 2.3e-50 171.6 0.6 2.0 1 1 1 2 2 2 2 FMN-dependent dehydrogenase Glu_synthase PF01645.17 ORF38577 - 4.5e-05 22.8 0.1 9.9e-05 21.6 0.1 1.5 1 1 0 1 1 1 1 Conserved region in glutamate synthase IMPDH PF00478.25 ORF38577 - 0.0063 15.6 7.2 0.027 13.5 2.6 2.5 2 1 1 3 3 3 2 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 ORF38577 - 0.21 10.7 0.3 0.85 8.8 0.1 1.9 1 1 0 2 2 2 0 Dihydroorotate dehydrogenase Porin_3 PF01459.22 ORF29948 - 2.5e-13 50.1 4.9 3e-13 49.9 4.9 1.1 1 0 0 1 1 1 1 Eukaryotic porin XhlA PF10779.9 ORF28147 - 0.00025 21.2 8.6 0.00025 21.2 8.6 6.2 1 1 5 7 7 7 2 Haemolysin XhlA Apolipoprotein PF01442.18 ORF28147 - 0.00039 20.3 12.0 0.00039 20.3 12.0 2.6 1 1 1 2 2 2 1 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF28147 - 0.0013 18.8 18.7 0.022 14.8 2.4 3.9 1 1 2 3 3 3 3 Baculovirus polyhedron envelope protein, PEP, C terminus DUF885 PF05960.11 ORF28147 - 0.14 11.7 16.2 5.1 6.6 16.2 2.0 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF885) DUF3584 PF12128.8 ORF28147 - 0.25 8.8 38.7 0.28 8.6 38.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF1664 PF07889.12 ORF28147 - 0.68 10.0 39.7 0.17 11.9 5.5 4.4 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) Phasin PF05597.11 ORF28147 - 2 8.4 30.7 0.18 11.8 3.7 4.1 1 1 3 4 4 4 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Spc7 PF08317.11 ORF28147 - 3.1 6.6 44.2 1.9 7.3 15.8 2.6 1 1 2 3 3 3 0 Spc7 kinetochore protein Jnk-SapK_ap_N PF09744.9 ORF28147 - 3.2 8.0 41.1 0.25 11.5 9.1 3.8 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 ApoO PF09769.9 ORF28147 - 5.8 6.9 11.7 1.7 8.6 1.2 3.9 1 1 2 3 3 3 0 Apolipoprotein O DUF4041 PF13250.6 ORF28147 - 7 6.6 13.6 0.35 10.8 0.2 4.4 3 2 2 5 5 5 0 Domain of unknown function (DUF4041) Peptidase_C1 PF00112.23 ORF26383 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF26383 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF26383 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family TPH PF13868.6 ORF25841 - 9.2e-13 47.4 108.8 1e-12 47.3 108.8 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain SDH_alpha PF03313.15 ORF25438 - 1.9e-77 260.5 11.5 2.3e-77 260.2 11.5 1.1 1 0 0 1 1 1 1 Serine dehydratase alpha chain Nuc_deoxyri_tr2 PF15891.5 ORF24836 - 0.12 12.7 2.5 0.29 11.5 2.5 1.6 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase like Homeodomain PF00046.29 ORF24693 - 0.011 15.6 0.4 0.026 14.3 0.4 1.7 1 0 0 1 1 1 0 Homeodomain Sec62 PF03839.16 ORF24693 - 0.097 12.2 2.6 0.2 11.1 2.6 1.5 1 0 0 1 1 1 0 Translocation protein Sec62 Tctex-1 PF03645.13 ORF24693 - 2.4 8.4 5.7 2.7 8.3 3.1 2.4 2 1 0 2 2 2 0 Tctex-1 family VWA_N PF08399.11 ORF24693 - 4.5 7.8 6.6 0.46 11.0 0.5 2.3 2 2 0 2 2 2 0 VWA N-terminal Rnk_N PF14760.6 ORF21873 - 0.4 11.2 1.4 5 7.7 0.4 2.4 2 0 0 2 2 2 0 Rnk N-terminus Crisp PF08562.10 ORF18038 - 9.9 6.8 21.2 4.1 8.1 0.4 4.4 4 0 0 4 4 4 0 Crisp CTD_bind PF04818.13 ORF152161 - 0.24 12.2 4.4 0.86 10.5 0.5 3.3 3 0 0 3 3 3 0 RNA polymerase II-binding domain. DivIC PF04977.15 ORF152151 - 0.0053 16.5 3.7 0.0053 16.5 3.7 3.6 2 1 1 3 3 3 1 Septum formation initiator CENP-F_leu_zip PF10473.9 ORF152151 - 0.013 15.6 9.5 0.013 15.6 9.5 2.8 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlaC_arch PF05377.11 ORF152151 - 0.013 15.9 5.4 0.013 15.9 5.4 2.7 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) YabA PF06156.13 ORF152151 - 0.017 15.7 4.2 0.017 15.7 4.2 2.7 2 1 0 2 2 2 0 Initiation control protein YabA V-SNARE_C PF12352.8 ORF152151 - 0.02 15.2 0.2 0.063 13.6 0.2 1.9 1 0 0 1 1 1 0 Snare region anchored in the vesicle membrane C-terminus Fzo_mitofusin PF04799.13 ORF152151 - 0.95 9.0 18.6 3.6 7.1 9.0 2.3 1 1 2 3 3 3 0 fzo-like conserved region AIF-MLS PF14962.6 ORF152151 - 2.5 8.0 6.6 6.9 6.6 6.5 1.7 1 1 0 1 1 1 0 Mitochondria Localisation Sequence bZIP_1 PF00170.21 ORF152151 - 5.8 7.1 17.9 1.5 9.0 6.6 3.3 2 2 1 3 3 3 0 bZIP transcription factor DUF725 PF05267.12 ORF152151 - 6.5 6.8 12.1 1.2 9.2 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF725) LysR_substrate PF03466.20 ORF152010 - 6.2e-39 133.5 0.0 8.9e-39 133.0 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF152010 - 1e-19 70.2 0.6 1.7e-19 69.5 0.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family P22_Cro PF14549.6 ORF152010 - 0.11 12.4 0.1 2.3 8.1 0.1 2.3 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro uDENN PF03456.18 ORF151750 - 0.00036 21.2 2.4 0.00052 20.7 0.2 2.2 2 0 0 2 2 2 1 uDENN domain Chordopox_A13L PF05961.11 ORF151750 - 0.027 14.7 2.1 0.1 12.9 0.2 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein DENN PF02141.21 ORF151750 - 0.04 13.9 0.4 0.11 12.4 0.3 1.8 1 1 0 1 1 1 0 DENN (AEX-3) domain Nucleoside_tran PF01733.18 ORF148212 - 2.5e-19 69.8 2.8 3.6e-19 69.3 2.8 1.2 1 0 0 1 1 1 1 Nucleoside transporter DUF4834 PF16118.5 ORF148212 - 0.011 16.7 0.2 0.041 14.9 0.2 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Sigma_reg_N PF13800.6 ORF148212 - 0.016 15.5 0.2 0.016 15.5 0.2 2.0 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Ac76 PF05814.11 ORF148212 - 0.021 14.9 1.6 0.089 12.8 1.6 2.1 1 0 0 1 1 1 0 Orf76 (Ac76) CcmE PF03100.15 ORF148212 - 0.17 11.8 0.1 0.36 10.8 0.1 1.4 1 0 0 1 1 1 0 CcmE DUF3139 PF11337.8 ORF148212 - 0.21 12.2 4.1 0.16 12.6 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF4083 PF13314.6 ORF148212 - 0.89 9.5 7.9 0.15 12.1 3.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) ATP-synt_8 PF00895.20 ORF148212 - 2.7 8.5 5.9 1.4 9.4 1.2 2.9 2 0 0 2 2 2 0 ATP synthase protein 8 DUF2981 PF11200.8 ORF148212 - 5.2 6.7 5.9 0.38 10.5 0.1 1.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2981) Snapin_Pallidin PF14712.6 ORF146592 - 0.37 11.2 21.3 0.75 10.3 5.1 4.4 4 0 0 4 4 4 0 Snapin/Pallidin Baculo_PEP_C PF04513.12 ORF146592 - 0.78 9.8 7.4 2.4 8.2 0.7 3.3 2 2 2 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus FUSC PF04632.12 ORF146592 - 0.94 7.9 25.1 1.1 7.8 2.9 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein family DUF1664 PF07889.12 ORF146592 - 1 9.4 14.7 0.16 12.0 0.5 3.3 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) DUF4407 PF14362.6 ORF146592 - 1.9 7.8 21.6 7.4 5.8 20.9 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) IL15 PF02372.15 ORF146592 - 2.2 8.3 6.5 5.7 7.0 0.6 2.7 1 1 1 2 2 2 0 Interleukin 15 Spc7 PF08317.11 ORF146592 - 3.8 6.3 30.2 12 4.6 5.6 2.8 1 1 2 3 3 3 0 Spc7 kinetochore protein Pkinase PF00069.25 ORF146572 - 2.5e-52 177.8 0.3 2.9e-52 177.6 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF146572 - 1.8e-28 99.6 0.2 2.2e-28 99.3 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF146572 - 0.0031 16.9 0.0 0.0055 16.1 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF146572 - 0.012 14.5 0.3 0.019 13.9 0.1 1.4 2 0 0 2 2 2 0 Haspin like kinase domain Kdo PF06293.14 ORF146572 - 0.025 13.9 0.1 0.037 13.4 0.1 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF2987 PF11205.8 ORF145412 - 0.091 12.7 1.7 4.5 7.2 0.4 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF145412 - 4.9 7.6 9.6 3.5 8.1 0.3 4.1 4 1 0 4 4 4 0 Phage protein Gp68 Trypan_PARP PF05887.11 ORF145412 - 5.9 6.9 8.1 7.6 6.5 7.5 1.4 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Peptidase_C1 PF00112.23 ORF143192 - 3.4e-59 200.6 6.2 3.4e-59 200.6 6.2 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF143192 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF143192 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family VWD PF00094.25 ORF142264 - 0.0015 18.8 0.1 0.0027 18.0 0.1 1.6 1 1 0 1 1 1 1 von Willebrand factor type D domain SlyX PF04102.12 ORF142035 - 0.24 12.1 2.6 0.32 11.7 0.8 2.2 1 1 1 2 2 2 0 SlyX Abhydrolase_1 PF00561.20 ORF141311 - 2.4e-14 53.6 0.1 6.5e-14 52.2 0.0 1.6 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF141311 - 1.2e-09 39.1 0.0 2.4e-09 38.1 0.0 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF141311 - 0.0036 16.6 0.0 0.0051 16.1 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Esterase PF00756.20 ORF141311 - 0.011 15.4 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 Putative esterase Ndr PF03096.14 ORF141311 - 0.064 11.9 0.0 0.58 8.8 0.0 2.0 1 1 0 1 1 1 0 Ndr family RsfS PF02410.15 ORF140514 - 3.4e-18 65.9 0.0 5e-18 65.4 0.0 1.3 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation NAD_binding_10 PF13460.6 ORF138990 - 0.013 15.4 0.0 0.024 14.5 0.0 1.4 1 0 0 1 1 1 0 NAD(P)H-binding WD40 PF00400.32 ORF138679 - 1.3e-07 32.2 12.7 0.015 16.2 0.0 4.1 3 1 1 4 4 4 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF138679 - 0.0018 18.6 0.1 1.9 8.9 0.0 3.3 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Hira PF07569.11 ORF138679 - 0.1 12.3 0.6 5.1 6.7 0.0 2.3 2 0 0 2 2 2 0 TUP1-like enhancer of split NEMP PF10225.9 ORF134659 - 9.8e-05 22.1 0.1 9.8e-05 22.1 0.1 2.0 2 1 0 2 2 2 1 NEMP family Peptidase_C1 PF00112.23 ORF13272 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF13272 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF13272 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family T2SSE PF00437.20 ORF129940 - 1.9e-41 141.9 0.7 2.5e-41 141.6 0.2 1.4 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_22 PF13401.6 ORF129940 - 0.00034 20.9 0.0 0.00075 19.8 0.0 1.8 1 1 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 ORF129940 - 0.0005 19.5 0.1 0.0013 18.1 0.1 1.7 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_29 PF13555.6 ORF129940 - 0.00052 19.7 0.2 0.001 18.8 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 ORF129940 - 0.0007 19.4 1.0 0.002 17.9 0.1 2.2 3 1 0 3 3 2 1 AAA domain AAA_16 PF13191.6 ORF129940 - 0.00093 19.6 0.5 0.00093 19.6 0.5 1.7 2 1 0 2 2 1 1 AAA ATPase domain TrwB_AAD_bind PF10412.9 ORF129940 - 0.0011 18.0 0.1 0.0028 16.6 0.0 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_23 PF13476.6 ORF129940 - 0.0015 19.1 0.1 0.0027 18.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 ORF129940 - 0.0029 17.7 0.0 0.012 15.7 0.0 2.0 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF129940 - 0.0045 17.5 0.0 0.0085 16.6 0.0 1.6 1 1 0 1 1 1 1 ABC transporter DUF87 PF01935.17 ORF129940 - 0.0058 16.7 0.0 0.008 16.3 0.0 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_19 PF13245.6 ORF129940 - 0.0062 16.9 1.2 0.016 15.5 0.3 2.3 2 1 0 2 2 2 1 AAA domain DUF853 PF05872.12 ORF129940 - 0.009 14.6 0.4 0.58 8.7 0.1 2.1 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) Zeta_toxin PF06414.12 ORF129940 - 0.037 13.3 0.0 0.1 11.9 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin SRP54 PF00448.22 ORF129940 - 0.04 13.5 0.1 0.071 12.7 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ResIII PF04851.15 ORF129940 - 0.047 13.7 0.0 0.087 12.8 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Kinesin PF00225.23 ORF129940 - 0.091 11.7 0.0 0.13 11.1 0.0 1.2 1 0 0 1 1 1 0 Kinesin motor domain DUF2075 PF09848.9 ORF129940 - 0.11 11.8 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 ORF129940 - 0.16 11.5 0.1 0.39 10.2 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region CbiA PF01656.23 ORF129940 - 0.21 11.6 0.5 0.5 10.4 0.5 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Glyco_tran_28_C PF04101.16 ORF128255 - 7.8e-08 32.5 0.0 1.1e-07 32.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain UDPGT PF00201.18 ORF128255 - 0.00021 20.3 0.0 0.0003 19.7 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Peptidase_C7 PF01830.18 ORF124286 - 0.0042 16.5 0.7 0.81 9.1 0.0 2.2 2 0 0 2 2 2 2 Peptidase C7 family PDZ_3 PF17815.1 ORF123448 - 1.8e-27 96.0 0.0 2.9e-27 95.3 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF123448 - 0.0069 16.2 0.4 1.9 8.4 0.1 2.9 3 0 0 3 3 3 2 PDZ domain PDZ_2 PF13180.6 ORF123448 - 0.025 14.9 0.0 0.4 11.0 0.0 2.5 2 1 0 2 2 2 0 PDZ domain PDZ_1 PF12812.7 ORF123448 - 0.092 12.8 0.0 7.4 6.7 0.0 2.3 2 0 0 2 2 2 0 PDZ-like domain Peptidase_C1 PF00112.23 ORF121332 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.5 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF121332 - 9.3e-15 54.8 3.6 9.3e-15 54.8 3.6 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF121332 - 2.9e-05 23.0 0.8 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family TPR_12 PF13424.6 ORF120458 - 7.8e-07 29.3 5.8 6.9e-05 23.1 0.5 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF120458 - 0.00058 19.3 3.5 0.0033 16.8 3.4 2.0 1 1 0 1 1 1 1 MalT-like TPR region TPR_16 PF13432.6 ORF120458 - 0.00089 19.9 2.1 0.32 11.7 0.2 2.9 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF120458 - 0.0014 18.5 2.6 0.032 14.1 0.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF120458 - 0.013 16.3 3.5 0.52 11.3 0.1 3.8 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF120458 - 0.014 15.6 2.3 14 6.2 0.0 4.6 5 0 0 5 5 5 0 Tetratricopeptide repeat Phenol_Hydrox PF02332.18 ORF120458 - 0.03 13.9 0.0 0.072 12.6 0.0 1.6 2 0 0 2 2 2 0 Methane/Phenol/Toluene Hydroxylase TPR_2 PF07719.17 ORF120458 - 0.049 13.8 1.9 3.3 8.1 0.1 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF120458 - 0.12 12.9 1.5 4.2 7.9 0.8 3.2 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF120458 - 1.1 10.1 3.0 1e+02 3.9 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat UPF0181 PF03701.14 ORF120197 - 0.083 12.5 0.0 0.21 11.2 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0181) PutA_N PF18083.1 ORF120197 - 0.14 12.2 0.0 0.39 10.8 0.0 1.7 1 0 0 1 1 1 0 Proline utilization A N-terminal domain DUF4636 PF15468.6 ORF120197 - 0.15 11.7 0.5 0.26 11.0 0.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) Peptidase_C31 PF05410.13 ORF119739 - 0.023 14.7 0.1 0.069 13.2 0.1 1.8 1 0 0 1 1 1 0 Porcine arterivirus-type cysteine proteinase alpha DUF2987 PF11205.8 ORF116861 - 0.091 12.7 1.7 4.5 7.2 0.4 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF116861 - 4.9 7.6 9.6 3.5 8.1 0.3 4.1 4 1 0 4 4 4 0 Phage protein Gp68 Trypan_PARP PF05887.11 ORF116861 - 5.9 6.9 8.1 7.6 6.5 7.5 1.4 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) uDENN PF03456.18 ORF116154 - 0.00036 21.2 2.4 0.00052 20.7 0.2 2.2 2 0 0 2 2 2 1 uDENN domain Chordopox_A13L PF05961.11 ORF116154 - 0.027 14.7 2.1 0.1 12.9 0.2 2.7 2 0 0 2 2 2 0 Chordopoxvirus A13L protein DENN PF02141.21 ORF116154 - 0.04 13.9 0.4 0.11 12.4 0.3 1.8 1 1 0 1 1 1 0 DENN (AEX-3) domain Peptidase_C1 PF00112.23 ORF114353 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF114353 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF114353 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family DUF2987 PF11205.8 ORF113767 - 0.091 12.7 1.7 4.5 7.2 0.4 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF113767 - 4.9 7.6 9.6 3.5 8.1 0.3 4.1 4 1 0 4 4 4 0 Phage protein Gp68 Trypan_PARP PF05887.11 ORF113767 - 5.9 6.9 8.1 7.6 6.5 7.5 1.4 1 1 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) EamA PF00892.20 ORF110986 - 8.6e-22 77.8 34.1 1.4e-12 48.0 20.0 2.1 2 0 0 2 2 2 2 EamA-like transporter family Peptidase_C1 PF00112.23 ORF109128 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF109128 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF109128 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF107929 - 2.8e-59 200.8 6.1 2.8e-59 200.8 6.1 1.4 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF107929 - 6.1e-14 52.2 4.0 6.1e-14 52.2 4.0 1.8 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 ORF107929 - 3.3e-05 22.9 0.9 0.004 16.0 0.4 2.2 2 0 0 2 2 2 2 Peptidase C1-like family zf-CCHC PF00098.23 ORF102121 - 0.0013 18.7 0.8 0.003 17.6 0.8 1.6 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 ORF102121 - 0.0015 18.3 2.5 0.0027 17.5 2.5 1.4 1 0 0 1 1 1 1 Zinc knuckle PC_rep PF01851.22 NODE_21924_length_925_cov_2.387640_g16922_i0reverse_frame_3 - 0.013 16.0 0.2 7 7.3 0.0 3.7 3 1 0 3 3 3 0 Proteasome/cyclosome repeat DUF5426 PF17473.2 NODE_21924_length_925_cov_2.387640_g16922_i0reverse_frame_3 - 0.88 9.8 6.4 0.13 12.5 0.8 2.4 2 1 1 3 3 3 0 Family of unknown function (DUF5426) HPS6 PF15702.5 NODE_21909_length_925_cov_109.915730_g16908_i0forward_frame_3 - 1.3 7.0 3.4 1.7 6.5 3.4 1.0 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein LmjF365940-deam PF14421.6 NODE_21909_length_925_cov_109.915730_g16908_i0forward_frame_2 - 0.084 12.5 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 A distinct subfamily of CDD/CDA-like deaminases Cyclotide PF03784.13 NODE_21906_length_925_cov_137.332584_g16905_i0reverse_frame_2 - 0.03 14.4 0.3 0.03 14.4 0.3 2.7 3 0 0 3 3 3 0 Cyclotide family ComR_TPR PF18710.1 NODE_21871_length_926_cov_94.975309_g16874_i0forward_frame_3 - 0.014 15.0 0.6 0.031 13.8 0.1 1.7 2 0 0 2 2 2 0 ComR tetratricopeptide ER_lumen_recept PF00810.18 ORF98351 - 3.9e-30 105.6 1.0 3.9e-30 105.6 1.0 1.9 2 0 0 2 2 2 1 ER lumen protein retaining receptor AA_permease_2 PF13520.6 ORF98351 - 0.0024 16.8 4.2 0.0046 15.9 4.2 1.5 1 0 0 1 1 1 1 Amino acid permease Pkinase PF00069.25 ORF96695 - 3.2e-26 92.3 0.8 5.6e-26 91.5 0.5 1.5 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF96695 - 4.9e-21 75.2 0.0 7.6e-21 74.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF96695 - 3.4e-05 23.3 0.0 5.2e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF96695 - 0.00038 19.4 0.0 0.0004 19.3 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF96695 - 0.0019 18.1 0.0 0.0028 17.6 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF96695 - 0.031 13.6 0.0 0.05 13.0 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Rcd1 PF04078.13 ORF93364 - 5.6e-115 383.1 0.3 6.5e-115 382.9 0.3 1.0 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like adh_short PF00106.25 ORF87577 - 3.5e-30 104.9 0.2 4.7e-30 104.5 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF87577 - 4.9e-20 72.1 0.0 6.5e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF87577 - 3.2e-06 27.2 0.0 5.2e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF87577 - 0.00019 21.1 0.3 0.00027 20.6 0.3 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF87577 - 0.00052 19.7 0.1 0.018 14.7 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NleF_casp_inhib PF16809.5 ORF87577 - 0.0037 17.2 1.1 0.0053 16.7 1.1 1.2 1 0 0 1 1 1 1 NleF caspase inhibitor GxDLY PF14607.6 ORF87577 - 0.012 15.4 0.4 0.027 14.3 0.0 1.7 2 0 0 2 2 2 0 N-terminus of Esterase_SGNH_hydro-type 3HCDH_N PF02737.18 ORF87577 - 0.019 14.9 0.1 0.03 14.2 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF87577 - 0.051 13.6 0.1 0.11 12.4 0.1 1.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF87577 - 0.056 12.8 0.1 5.8 6.2 0.0 2.1 1 1 1 2 2 2 0 ThiF family Sacchrp_dh_NADP PF03435.18 ORF87577 - 0.1 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain SKA2 PF16740.5 ORF82566 - 0.62 9.9 14.3 2.3 8.1 1.5 4.2 2 1 1 4 4 4 0 Spindle and kinetochore-associated protein 2 HALZ PF02183.18 ORF82566 - 1.4 9.2 8.5 0.23 11.7 0.6 3.2 3 0 0 3 3 3 0 Homeobox associated leucine zipper Exonuc_VII_S PF02609.16 ORF78438 - 0.0039 17.2 1.2 0.0085 16.1 0.2 2.2 2 1 0 2 2 2 1 Exonuclease VII small subunit COG2 PF06148.11 ORF78438 - 0.25 11.4 4.0 1.2 9.3 2.6 2.5 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DNA_ligase_A_C PF04679.15 ORF71666 - 0.18 12.4 2.4 0.85 10.2 0.1 2.6 2 1 1 3 3 3 0 ATP dependent DNA ligase C terminal region AA_kinase PF00696.28 ORF67808 - 6.3e-25 88.2 0.0 8.8e-25 87.7 0.0 1.2 1 0 0 1 1 1 1 Amino acid kinase family Vac7 PF12751.7 ORF66393 - 0.3 10.5 1.3 0.32 10.4 0.1 1.6 2 0 0 2 2 2 0 Vacuolar segregation subunit 7 SKA2 PF16740.5 ORF60206 - 1.6 8.5 13.4 4.5 7.1 0.9 4.2 2 1 1 4 4 4 0 Spindle and kinetochore-associated protein 2 HALZ PF02183.18 ORF60206 - 2 8.7 8.6 0.23 11.7 0.6 3.1 3 0 0 3 3 3 0 Homeobox associated leucine zipper TctB PF07331.11 ORF55124 - 0.065 13.5 4.2 0.18 12.1 4.2 1.8 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family MARVEL PF01284.23 ORF55124 - 0.23 11.5 0.2 0.23 11.5 0.2 2.4 2 1 0 2 2 2 0 Membrane-associating domain DUF805 PF05656.14 ORF55124 - 8.6 6.8 10.6 1.5 9.3 1.7 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF805) AA_kinase PF00696.28 ORF53610 - 6.3e-25 88.2 0.0 8.8e-25 87.7 0.0 1.2 1 0 0 1 1 1 1 Amino acid kinase family SGP PF17228.2 ORF52796 - 0.00036 21.3 10.8 0.00036 21.3 10.8 4.9 1 1 3 4 4 4 2 Sulphur globule protein C1_1 PF00130.22 ORF52796 - 0.014 15.3 2.1 0.025 14.4 2.1 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) C1_2 PF03107.16 ORF52796 - 0.23 11.8 2.8 0.41 11.0 2.8 1.4 1 0 0 1 1 1 0 C1 domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks59.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks59.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks59.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks59.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Guanylate_cyc PF00211.20 ORF145483 - 2.2e-12 47.0 0.1 7.1e-12 45.3 0.0 1.8 2 0 0 2 2 2 1 Adenylate and Guanylate cyclase catalytic domain Peroxin-13_N PF04088.13 ORF145483 - 0.01 16.1 0.0 0.01 16.1 0.0 3.5 3 1 0 3 3 3 0 Peroxin 13, N-terminal region H_lectin PF09458.10 ORF142898 - 3.7e-07 30.2 4.2 0.00093 19.3 0.1 7.2 6 2 0 6 6 6 4 H-type lectin domain RIFIN PF02009.16 ORF142898 - 0.38 10.6 20.8 0.1 12.5 7.8 2.4 2 0 0 2 2 2 0 Rifin Cullin PF00888.22 ORF23768 - 7.4e-38 130.6 9.1 7.4e-38 130.6 9.1 3.2 2 1 0 2 2 2 1 Cullin family Baculo_PEP_C PF04513.12 ORF23768 - 1e-05 25.6 32.8 0.014 15.4 1.6 6.7 2 2 3 7 7 7 4 Baculovirus polyhedron envelope protein, PEP, C terminus GAS PF13851.6 ORF23768 - 0.0014 18.0 9.8 0.0014 18.0 9.8 5.9 2 1 1 5 5 5 1 Growth-arrest specific micro-tubule binding Fib_alpha PF08702.10 ORF23768 - 1.1 9.4 45.2 0.7 10.1 1.7 7.0 1 1 5 7 7 7 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 ORF23768 - 4.7 7.3 45.2 0.12 12.5 2.5 8.1 3 2 4 8 8 8 0 Protein of unknown function (DUF1664) GIT_CC PF16559.5 ORF23768 - 9.7 6.1 36.8 0.99 9.3 0.1 7.4 7 1 1 8 8 8 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF3584 PF12128.8 ORF150246 - 0.00034 18.3 35.8 0.00034 18.3 35.8 3.4 1 1 2 3 3 3 2 Protein of unknown function (DUF3584) Fez1 PF06818.15 ORF150246 - 0.0043 17.5 15.3 0.0043 17.5 15.3 6.8 1 1 5 6 6 6 2 Fez1 Styelin PF17562.2 ORF150246 - 0.0047 17.3 2.4 0.014 15.7 0.9 2.7 2 0 0 2 2 2 1 Styelin SDH_alpha PF03313.15 ORF95764 - 2.5e-48 165.1 15.7 2.5e-48 165.1 15.7 2.5 1 1 1 2 2 2 1 Serine dehydratase alpha chain Copper-fist PF00649.18 ORF95764 - 0.04 13.4 0.0 0.095 12.2 0.0 1.6 1 0 0 1 1 1 0 Copper fist DNA binding domain EspB PF05802.11 ORF95764 - 0.29 11.1 10.6 3.4 7.6 0.7 2.3 2 0 0 2 2 2 0 Enterobacterial EspB protein FixQ PF05545.11 ORF95764 - 3.9 7.5 7.1 4.1 7.5 0.6 3.0 2 0 0 2 2 2 0 Cbb3-type cytochrome oxidase component FixQ cNMP_binding PF00027.29 ORF24353 - 4.2e-34 116.5 0.1 2.3e-18 66.0 0.0 2.5 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Ion_trans PF00520.31 ORF24353 - 6.4e-15 55.0 20.5 1.1e-14 54.3 20.5 1.3 1 0 0 1 1 1 1 Ion transport protein KxDL PF10241.9 ORF24353 - 4.1 7.8 9.1 11 6.4 3.8 3.0 2 0 0 2 2 2 0 Uncharacterized conserved protein Lectin_N PF03954.14 ORF24353 - 5.8 6.7 11.7 0.89 9.3 0.1 3.1 3 1 0 3 3 3 0 Hepatic lectin, N-terminal domain GTP_EFTU PF00009.27 ORF812 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF812 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF812 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF812 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF812 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF812 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF812 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF812 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF812 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF812 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF812 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF812 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 GTP_EFTU PF00009.27 ORF75599 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF75599 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF75599 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF75599 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF75599 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF75599 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF75599 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF75599 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF75599 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF75599 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF75599 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF75599 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 GTP_EFTU PF00009.27 ORF60310 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF60310 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF60310 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF60310 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF60310 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF60310 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF60310 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF60310 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF60310 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF60310 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF60310 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF60310 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 GTP_EFTU PF00009.27 ORF44982 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF44982 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF44982 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF44982 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF44982 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF44982 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF44982 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF44982 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF44982 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF44982 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF44982 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF44982 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 GTP_EFTU PF00009.27 ORF43444 - 5.9e-64 215.2 0.4 9.2e-64 214.6 0.4 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 ORF43444 - 1.3e-23 83.1 0.1 4.5e-23 81.3 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF43444 - 7e-22 77.3 0.0 2e-21 75.8 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 ORF43444 - 1.2e-14 54.2 0.0 3e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 ORF43444 - 5.4e-14 52.3 0.1 1.6e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF43444 - 0.00012 22.2 2.1 0.00039 20.5 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase V_ATPase_I PF01496.19 ORF43444 - 0.023 12.6 0.5 0.032 12.2 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RF3_C PF16658.5 ORF43444 - 0.049 13.4 0.0 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 Class II release factor RF3, C-terminal domain Eapp_C PF10238.9 ORF43444 - 0.084 12.9 0.2 0.18 11.9 0.2 1.5 1 0 0 1 1 1 0 E2F-associated phosphoprotein ORC_WH_C PF18137.1 ORF43444 - 0.73 9.9 4.8 1.6 8.8 4.8 1.5 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal RNA_pol_Rpc4 PF05132.14 ORF43444 - 0.91 9.9 4.2 1.8 9.0 4.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Paf1 PF03985.13 ORF43444 - 8.8 5.2 10.0 15 4.5 10.0 1.2 1 0 0 1 1 1 0 Paf1 Penicil_amidase PF01804.18 ORF110626 - 1.6e-135 453.7 0.0 1.8e-135 453.5 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase PAN_4 PF14295.6 ORF8412 - 4.6e-05 23.2 9.2 0.018 14.9 0.4 3.4 3 0 0 3 3 3 2 PAN domain Adaptin_N PF01602.20 ORF51145 - 1.2e-27 96.7 17.9 3.3e-27 95.3 17.9 1.7 1 1 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 ORF51145 - 2.3e-06 27.8 13.4 0.0063 16.6 0.0 5.9 5 2 1 6 6 6 3 non-SMC mitotic condensation complex subunit 1 FANCI_S2 PF14676.6 ORF51145 - 0.011 16.1 3.0 2.8 8.2 0.1 3.2 3 0 0 3 3 3 0 FANCI solenoid 2 HEAT PF02985.22 ORF51145 - 0.014 15.6 0.0 2.5 8.6 0.0 3.7 3 0 0 3 3 3 0 HEAT repeat HEAT_2 PF13646.6 ORF51145 - 0.036 14.4 0.0 0.3 11.5 0.0 2.6 2 0 0 2 2 2 0 HEAT repeats AAA_12 PF13087.6 ORF76460 - 6.3e-44 150.0 0.0 1.2e-43 149.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF76460 - 7e-31 108.0 0.5 1.3e-28 100.5 0.5 2.6 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF76460 - 2.1e-13 50.8 0.0 1.9e-11 44.5 0.0 3.0 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF76460 - 9.4e-12 45.0 0.1 2.5e-06 27.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain DUF2075 PF09848.9 ORF76460 - 1.5e-08 34.3 0.2 0.00049 19.5 0.0 3.2 3 0 0 3 3 3 2 Uncharacterized conserved protein (DUF2075) Viral_helicase1 PF01443.18 ORF76460 - 2.9e-06 27.2 0.2 0.023 14.4 0.0 3.4 3 0 0 3 3 3 2 Viral (Superfamily 1) RNA helicase UvrD-helicase PF00580.21 ORF76460 - 4.5e-05 23.1 0.1 0.00015 21.4 0.1 2.2 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_22 PF13401.6 ORF76460 - 0.0002 21.7 1.6 0.076 13.3 0.0 3.5 3 1 0 3 3 3 1 AAA domain ResIII PF04851.15 ORF76460 - 0.0003 20.8 0.0 0.00098 19.2 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 ORF76460 - 0.00053 19.8 0.1 0.0016 18.2 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase UvrD_C_2 PF13538.6 ORF76460 - 0.011 15.6 0.0 0.023 14.5 0.0 1.6 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain AAA_16 PF13191.6 ORF76460 - 0.014 15.8 0.3 0.22 11.9 0.0 2.6 2 0 0 2 2 2 0 AAA ATPase domain PhoH PF02562.16 ORF76460 - 0.024 14.1 0.0 0.13 11.7 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein AAA PF00004.29 ORF76460 - 0.024 15.0 0.0 0.36 11.3 0.0 2.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 ORF76460 - 0.061 12.9 0.5 0.38 10.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain CheB_methylest PF01339.17 ORF76460 - 0.14 11.9 0.4 0.26 11.0 0.4 1.4 1 0 0 1 1 1 0 CheB methylesterase AAA_5 PF07728.14 ORF76460 - 0.14 12.2 0.3 0.9 9.5 0.0 2.6 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) CENP-Q PF13094.6 ORF737 - 0.0051 17.0 5.7 0.0051 17.0 5.7 9.5 2 1 7 9 9 9 1 CENP-Q, a CENPA-CAD centromere complex subunit CENP-Q PF13094.6 ORF52873 - 0.0051 17.0 5.7 0.0051 17.0 5.7 9.5 2 1 7 9 9 9 1 CENP-Q, a CENPA-CAD centromere complex subunit Oxysterol_BP PF01237.18 ORF12257 - 3e-48 164.6 3.4 4e-42 144.4 0.0 3.6 3 1 1 4 4 4 2 Oxysterol-binding protein PH PF00169.29 ORF12257 - 5.5e-16 59.0 1.0 1.5e-15 57.6 0.1 2.3 2 0 0 2 2 2 1 PH domain PH_8 PF15409.6 ORF12257 - 0.00046 20.4 0.0 0.0019 18.4 0.0 2.1 1 0 0 1 1 1 1 Pleckstrin homology domain PH_11 PF15413.6 ORF12257 - 0.084 13.3 0.9 0.2 12.1 0.1 2.2 2 0 0 2 2 2 0 Pleckstrin homology domain PDEase_I PF00233.19 ORF91495 - 1.5e-64 218.0 0.3 2.8e-64 217.1 0.3 1.4 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Ion_trans PF00520.31 ORF91495 - 2.5e-07 30.2 13.1 2.5e-07 30.2 13.1 3.2 3 0 0 3 3 3 1 Ion transport protein HD PF01966.22 ORF91495 - 0.12 12.6 0.0 0.32 11.2 0.0 1.7 1 0 0 1 1 1 0 HD domain Nodulin_late PF07127.11 ORF91495 - 1.5 9.2 8.8 1.5 9.2 3.1 3.2 2 0 0 2 2 2 0 Late nodulin protein PGM_PMM_I PF02878.16 ORF64879 - 8.1e-37 126.0 0.2 2.2e-35 121.3 0.1 2.6 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.16 ORF64879 - 8.9e-31 106.4 0.0 1.7e-30 105.6 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.16 ORF64879 - 1.9e-19 70.2 0.0 4.5e-19 69.0 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.20 ORF64879 - 3e-08 33.7 0.0 7.9e-08 32.4 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vps16_N PF04841.13 ORF131875 - 2.1e-40 138.7 2.0 1.2e-39 136.3 2.0 2.1 1 1 0 1 1 1 1 Vps16, N-terminal region Vps16_C PF04840.12 ORF131875 - 9.6e-23 80.7 16.9 1.5e-22 80.1 16.9 1.2 1 0 0 1 1 1 1 Vps16, C-terminal region Dna2 PF08696.11 ORF131875 - 0.57 10.0 4.6 0.61 9.9 2.1 2.3 2 1 0 2 2 2 0 DNA replication factor Dna2 PAN_4 PF14295.6 ORF112136 - 4.5e-05 23.3 9.2 0.018 14.9 0.4 3.4 3 0 0 3 3 3 2 PAN domain Ank_2 PF12796.7 ORF2490 - 8.3e-27 93.6 0.8 2.6e-13 50.3 0.1 5.1 2 1 3 5 5 5 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF2490 - 4e-22 78.3 0.0 4.5e-07 30.3 0.1 4.7 4 0 0 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF2490 - 2.1e-15 56.5 0.0 0.00017 21.8 0.1 6.5 2 1 4 7 7 7 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF2490 - 5e-14 51.0 0.2 0.0042 17.5 0.0 7.9 9 0 0 9 9 9 3 Ankyrin repeat Ank PF00023.30 ORF2490 - 1.7e-06 28.2 0.2 0.049 14.1 0.0 5.5 6 1 0 6 6 6 1 Ankyrin repeat cNMP_binding PF00027.29 ORF80477 - 1.4e-33 114.8 0.0 4e-18 65.3 0.0 2.5 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Ion_trans PF00520.31 ORF80477 - 5.5e-19 68.4 11.0 8.6e-19 67.7 11.0 1.3 1 0 0 1 1 1 1 Ion transport protein Diphthamide_syn PF01866.17 ORF80477 - 0.074 12.5 4.2 0.22 11.0 1.2 2.3 2 0 0 2 2 2 0 Putative diphthamide synthesis protein DNA_topoisoIV PF00521.20 ORF9415 - 3.7e-154 513.7 0.0 4.7e-154 513.4 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 ORF9415 - 6.7e-78 256.0 15.7 1.1e-14 53.6 0.1 6.6 7 0 0 7 7 7 6 DNA gyrase C-terminal domain, beta-propeller PHM7_cyt PF14703.6 ORF128963 - 9.8e-11 42.2 3.4 9.8e-11 42.2 3.4 2.6 3 1 0 3 3 3 1 Cytosolic domain of 10TM putative phosphate transporter Anoctamin PF04547.12 ORF128963 - 1.9e-09 36.9 5.2 1.9e-09 36.9 5.2 2.6 2 2 0 2 2 2 1 Calcium-activated chloride channel TMC PF07810.13 ORF128963 - 0.01 16.4 0.4 0.01 16.4 0.4 3.1 4 0 0 4 4 4 0 TMC domain RSN1_7TM PF02714.15 ORF128963 - 1.3 8.3 19.5 0.082 12.2 8.4 2.9 2 1 0 2 2 2 0 Calcium-dependent channel, 7TM region, putative phosphate Z1 PF10593.9 ORF128963 - 1.9 8.0 6.4 0.49 9.9 1.7 2.3 2 1 0 2 2 2 0 Z1 domain LRR_6 PF13516.6 ORF117892 - 8.2e-21 72.2 33.3 0.13 12.4 0.1 12.5 13 0 0 13 13 13 10 Leucine Rich repeat LRR_1 PF00560.33 ORF117892 - 2.7e-05 24.1 16.4 46 5.1 0.0 10.9 13 0 0 13 13 13 0 Leucine Rich Repeat LRR_4 PF12799.7 ORF117892 - 5.3e-05 23.5 24.6 0.2 12.1 0.2 7.8 7 1 1 8 8 8 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF117892 - 3.8 7.4 26.1 6.6 6.6 1.2 8.4 7 3 1 8 8 8 0 Leucine rich repeat AAA_8 PF12780.7 ORF47280 - 2e-63 214.2 1.8 2e-63 214.2 1.8 2.6 1 1 0 2 2 2 1 P-loop containing dynein motor region D4 MT PF12777.7 ORF47280 - 3.2e-28 98.8 12.3 4.8e-28 98.2 12.3 1.2 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 ORF47280 - 2.7e-15 56.4 0.6 6.7e-15 55.1 0.0 2.1 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_lid_1 PF17857.1 ORF47280 - 4.7e-10 39.6 0.2 4.7e-09 36.4 0.1 2.8 2 0 0 2 2 2 1 AAA+ lid domain Spc7 PF08317.11 ORF47280 - 4.9e-07 28.9 22.9 1.6e-06 27.2 9.2 2.4 2 0 0 2 2 2 2 Spc7 kinetochore protein DUF3552 PF12072.8 ORF47280 - 2.4e-05 23.9 32.4 7.5e-05 22.2 9.1 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3552) Exonuc_VII_L PF02601.15 ORF47280 - 0.015 14.9 15.4 0.098 12.2 6.8 2.3 2 0 0 2 2 2 0 Exonuclease VII, large subunit rve_3 PF13683.6 ORF47280 - 0.077 12.8 0.2 1.6 8.6 0.0 2.9 2 0 0 2 2 2 0 Integrase core domain UPF0242 PF06785.11 ORF47280 - 0.12 12.5 24.7 0.19 11.8 4.4 2.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Fez1 PF06818.15 ORF47280 - 2.2 8.7 20.9 1.6 9.1 3.4 2.4 2 0 0 2 2 2 0 Fez1 WXG100 PF06013.12 ORF47280 - 3.8 7.8 10.1 56 4.1 0.7 3.9 3 0 0 3 3 3 0 Proteins of 100 residues with WXG OmpH PF03938.14 ORF47280 - 6.9 7.0 34.9 10 6.5 17.7 3.1 2 1 0 2 2 2 0 Outer membrane protein (OmpH-like) zf-C4H2 PF10146.9 ORF47280 - 8.4 6.6 20.8 0.63 10.3 7.5 2.9 2 0 0 2 2 2 0 Zinc finger-containing protein Ion_trans PF00520.31 ORF52890 - 1.4e-11 44.1 23.5 2.5e-11 43.3 23.5 1.3 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 ORF52890 - 1.1e-08 34.3 7.8 1.1e-08 34.3 7.8 2.5 1 1 1 2 2 2 2 Polycystin cation channel Mem_trans PF03547.18 ORF52890 - 0.28 9.5 4.6 0.055 11.9 0.5 1.9 2 0 0 2 2 2 0 Membrane transport protein UBA_e1_thiolCys PF10585.9 ORF58618 - 1.3e-63 215.3 7.1 1.3e-63 215.3 7.1 1.7 2 0 0 2 2 2 1 Ubiquitin-activating enzyme active site ThiF PF00899.21 ORF58618 - 4.9e-58 196.4 0.0 8.4e-55 185.8 0.0 2.1 2 0 0 2 2 2 2 ThiF family E1_FCCH PF16190.5 ORF58618 - 2.6e-06 27.5 0.5 1.3e-05 25.3 0.5 2.3 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 FCCH domain E1_UFD PF09358.10 ORF58618 - 0.00028 21.5 0.3 0.0016 19.1 0.0 2.4 2 0 0 2 2 2 1 Ubiquitin fold domain E1_4HB PF16191.5 ORF58618 - 0.0033 17.6 0.1 0.015 15.5 0.0 2.1 2 0 0 2 2 2 1 Ubiquitin-activating enzyme E1 four-helix bundle CFIA_Pcf11 PF11526.8 ORF58618 - 0.49 10.9 4.3 20 5.8 2.1 2.9 3 0 0 3 3 3 0 Subunit of cleavage factor IA Pcf11 Nup35_RRM PF05172.13 ORF38396 - 0.16 12.0 4.8 53 3.9 0.0 6.1 4 2 2 6 6 6 0 Nup53/35/40-type RNA recognition motif RNase_P_Rpp14 PF01900.19 ORF38396 - 0.26 11.6 1.1 2.9e+02 1.7 0.0 5.7 7 1 1 8 8 8 0 Rpp14/Pop5 family ABC_tran PF00005.27 ORF111334 - 2.5e-67 225.6 1.8 2.1e-32 112.5 0.1 2.8 3 0 0 3 3 2 2 ABC transporter ABC_membrane PF00664.23 ORF111334 - 9.2e-27 94.4 13.7 1.7e-26 93.5 13.7 1.4 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF111334 - 3.5e-20 72.4 0.0 6.6e-08 32.3 0.0 3.9 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF111334 - 4.7e-10 39.9 1.5 0.00029 21.1 0.2 4.0 3 1 0 3 3 3 2 AAA domain AAA_16 PF13191.6 ORF111334 - 1.2e-08 35.5 0.3 0.0073 16.7 0.1 2.9 2 1 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 ORF111334 - 3.1e-08 33.7 0.4 0.0053 16.7 0.0 3.3 3 0 0 3 3 3 2 RsgA GTPase AAA_29 PF13555.6 ORF111334 - 1.5e-07 31.1 0.5 0.0093 15.7 0.2 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain G-alpha PF00503.20 ORF111334 - 3.8e-06 26.3 0.6 0.026 13.7 0.0 2.3 2 0 0 2 2 2 2 G-protein alpha subunit AAA_15 PF13175.6 ORF111334 - 1.7e-05 24.7 0.9 0.033 13.9 0.0 2.5 2 1 0 2 2 2 2 AAA ATPase domain AAA_14 PF13173.6 ORF111334 - 3.3e-05 23.9 0.3 0.26 11.3 0.0 4.0 4 0 0 4 4 4 1 AAA domain AAA PF00004.29 ORF111334 - 4.5e-05 23.9 4.7 1.2 9.6 0.4 4.2 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) ABC_ATPase PF09818.9 ORF111334 - 6.3e-05 22.0 4.9 0.065 12.0 0.1 3.5 3 1 0 3 3 3 1 Predicted ATPase of the ABC class SbcCD_C PF13558.6 ORF111334 - 6.4e-05 23.1 2.7 0.53 10.5 0.1 4.0 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_25 PF13481.6 ORF111334 - 6.7e-05 22.5 2.3 0.55 9.8 0.0 3.6 4 0 0 4 4 4 1 AAA domain AAA_7 PF12775.7 ORF111334 - 7.1e-05 22.4 1.1 0.048 13.2 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region TniB PF05621.11 ORF111334 - 7.6e-05 22.2 0.4 0.54 9.6 0.1 3.8 4 0 0 4 4 4 1 Bacterial TniB protein AAA_5 PF07728.14 ORF111334 - 0.00016 21.7 0.1 1.3 9.0 0.0 3.9 4 0 0 4 4 4 1 AAA domain (dynein-related subfamily) MMR_HSR1 PF01926.23 ORF111334 - 0.00021 21.4 1.7 0.26 11.4 0.0 3.6 4 0 0 4 4 3 1 50S ribosome-binding GTPase AAA_30 PF13604.6 ORF111334 - 0.00021 21.1 0.2 0.56 9.9 0.0 3.5 3 1 0 3 3 3 1 AAA domain DEAD PF00270.29 ORF111334 - 0.00039 20.2 0.1 0.18 11.5 0.1 3.5 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_21 PF13304.6 ORF111334 - 0.00044 20.2 0.7 1.1 9.0 0.1 3.6 3 1 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 ORF111334 - 0.00055 20.5 0.1 1.5 9.4 0.0 3.5 4 0 0 4 4 3 1 AAA domain ATP-synt_ab PF00006.25 ORF111334 - 0.0009 18.9 0.2 1.4 8.5 0.1 2.4 2 1 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain DUF815 PF05673.13 ORF111334 - 0.0013 17.9 0.0 0.2 10.8 0.0 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF815) Zeta_toxin PF06414.12 ORF111334 - 0.0015 17.9 0.2 0.54 9.5 0.0 2.8 3 0 0 3 3 2 1 Zeta toxin AAA_23 PF13476.6 ORF111334 - 0.0027 18.2 6.3 1 9.8 0.6 3.3 3 0 0 3 3 3 2 AAA domain DUF87 PF01935.17 ORF111334 - 0.003 17.7 1.7 0.32 11.1 0.3 3.0 3 0 0 3 3 3 1 Helicase HerA, central domain MoaE PF02391.17 ORF111334 - 0.0052 17.0 0.4 4.9 7.5 0.0 2.5 2 0 0 2 2 2 0 MoaE protein RNA_helicase PF00910.22 ORF111334 - 0.0067 16.8 0.1 3.8 7.9 0.0 3.5 3 0 0 3 3 2 1 RNA helicase Rad17 PF03215.15 ORF111334 - 0.0078 16.1 0.0 0.59 10.0 0.0 2.8 2 0 0 2 2 2 1 Rad17 P-loop domain Viral_helicase1 PF01443.18 ORF111334 - 0.0098 15.7 0.0 7.9 6.1 0.0 3.2 4 0 0 4 4 3 0 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 ORF111334 - 0.011 15.4 2.2 6.4 6.5 0.2 3.4 3 0 0 3 3 3 0 AAA domain PRK PF00485.18 ORF111334 - 0.012 15.3 0.0 2 8.1 0.0 2.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family NB-ARC PF00931.22 ORF111334 - 0.014 14.6 0.1 6.2 5.9 0.1 2.9 3 0 0 3 3 2 0 NB-ARC domain MeaB PF03308.16 ORF111334 - 0.017 14.1 0.0 0.67 8.9 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_17 PF13207.6 ORF111334 - 0.063 13.7 0.0 4.9 7.6 0.0 3.4 3 0 0 3 3 3 0 AAA domain DUF4909 PF16253.5 ORF111334 - 0.074 12.9 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4909) AAA_33 PF13671.6 ORF111334 - 0.16 12.1 0.0 7.6 6.7 0.0 2.7 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 ORF111334 - 0.31 10.9 2.6 26 4.7 0.0 3.7 4 0 0 4 4 4 0 NTPase PduV-EutP PF10662.9 ORF111334 - 2 8.1 5.1 2.3 8.0 0.2 3.1 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation ATPase PF06745.13 ORF111334 - 4.9 6.4 10.9 21 4.4 0.1 3.7 4 0 0 4 4 4 0 KaiC VIT PF08487.10 ORF65705 - 1.4e-24 86.4 4.9 2.1e-24 85.8 0.1 3.4 4 0 0 4 4 4 1 Vault protein inter-alpha-trypsin domain VWA_3 PF13768.6 ORF65705 - 2.8e-24 85.8 0.0 4.8e-24 85.1 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF65705 - 2.7e-11 44.0 0.0 8.2e-11 42.5 0.0 1.9 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT_2 PF13757.6 ORF65705 - 1.6e-09 37.5 0.0 3.8e-09 36.3 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF65705 - 2.6e-09 37.5 0.1 6e-09 36.4 0.1 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 ORF29976 - 2e-27 96.1 0.0 3.4e-27 95.3 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT PF08487.10 ORF29976 - 2.7e-25 88.7 5.0 5.7e-25 87.7 0.0 3.5 4 0 0 4 4 4 1 Vault protein inter-alpha-trypsin domain VWA PF00092.28 ORF29976 - 5.9e-15 56.0 0.4 1.3e-14 54.9 0.4 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF29976 - 7.7e-14 52.2 0.0 2.3e-13 50.7 0.0 1.9 1 0 0 1 1 1 1 von Willebrand factor type A domain VIT_2 PF13757.6 ORF29976 - 9.6e-09 35.0 0.0 2.3e-08 33.8 0.0 1.6 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain V_ATPase_I PF01496.19 ORF25382 - 9.6e-245 814.3 0.4 1.1e-244 814.2 0.4 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family RPN7 PF10602.9 ORF25382 - 0.074 12.8 0.0 0.28 10.9 0.0 1.9 2 0 0 2 2 2 0 26S proteasome subunit RPN7 tRNA-synt_2b PF00587.25 ORF23014 - 4.4e-30 105.0 0.0 2.7e-26 92.6 0.0 2.8 3 0 0 3 3 3 2 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 ORF23014 - 2.4e-17 62.9 0.3 5.5e-17 61.7 0.3 1.6 1 0 0 1 1 1 1 Anticodon binding domain tRNA_SAD PF07973.14 ORF23014 - 6.3e-11 42.2 0.0 1.4e-10 41.1 0.0 1.6 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain SurA_N_3 PF13624.6 ORF23014 - 0.0035 17.2 1.0 0.0077 16.0 1.0 1.5 1 0 0 1 1 1 1 SurA N-terminal domain ROF PF07073.12 ORF23014 - 0.025 14.7 0.0 2.5 8.3 0.0 2.7 2 0 0 2 2 2 0 Modulator of Rho-dependent transcription termination (ROF) YABBY PF04690.13 ORF23014 - 0.074 13.6 0.3 12 6.4 0.0 2.5 2 0 0 2 2 2 0 YABBY protein TSC22 PF01166.18 ORF133818 - 0.0074 16.6 0.3 0.0074 16.6 0.3 11.5 10 3 3 13 13 13 4 TSC-22/dip/bun family ApoO PF09769.9 ORF133818 - 2.9 7.9 7.8 2.2 8.2 1.2 3.6 2 1 1 3 3 3 0 Apolipoprotein O DUF4131 PF13567.6 ORF6078 - 0.051 13.2 0.0 0.051 13.2 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4131) DUF3742 PF12553.8 ORF6078 - 0.056 13.6 0.6 7.8 6.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3742) Prominin PF05478.11 ORF6078 - 9.8 4.0 18.6 0.9 7.4 0.1 2.2 2 0 0 2 2 2 0 Prominin A2M PF00207.22 ORF73277 - 6.3e-16 58.0 0.0 1.5e-15 56.8 0.0 1.6 1 0 0 1 1 1 1 Alpha-2-macroglobulin family A2M_BRD PF07703.14 ORF73277 - 4.6e-10 40.0 0.1 8.8e-10 39.1 0.1 1.5 1 0 0 1 1 1 1 Alpha-2-macroglobulin bait region domain bMG10 PF17973.1 ORF73277 - 3.8e-07 30.3 0.0 1.9e-06 28.1 0.0 2.2 2 0 0 2 2 2 1 Bacterial Alpha-2-macroglobulin MG10 domain Actin PF00022.19 ORF73277 - 0.14 10.7 0.0 0.23 10.0 0.0 1.2 1 0 0 1 1 1 0 Actin tRNA-synt_1c PF00749.21 ORF53523 - 2.7e-90 302.4 0.3 5.1e-90 301.6 0.3 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 ORF53523 - 1.2e-30 106.6 0.4 2.8e-30 105.5 0.4 1.7 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain GST_C PF00043.25 ORF53523 - 4e-07 30.2 0.0 1.4e-06 28.4 0.0 2.0 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF53523 - 0.00021 21.3 0.0 0.00051 20.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF53523 - 0.013 15.7 0.0 0.078 13.2 0.0 2.3 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain DUF1281_C PF18406.1 ORF53523 - 0.051 13.3 0.0 0.15 11.8 0.0 1.7 1 0 0 1 1 1 0 Ferredoxin-like domain in Api92-like protein Glycos_transf_2 PF00535.26 ORF118240 - 1.5e-24 86.7 0.0 3e-24 85.7 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF118240 - 2.1e-08 34.3 0.0 4.9e-08 33.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 ORF118240 - 0.00038 20.9 0.0 0.0015 19.0 0.0 2.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 ORF118240 - 0.0013 18.3 0.0 0.002 17.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 TLV_coat PF00429.19 ORF118240 - 0.039 12.6 0.0 0.062 12.0 0.0 1.2 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) ABC_tran PF00005.27 ORF94336 - 2.1e-30 106.0 0.0 4.7e-30 104.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF94336 - 1.2e-12 48.1 0.1 3.6e-12 46.5 0.1 1.7 1 1 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF94336 - 2e-06 27.4 0.4 0.0015 18.0 0.1 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF94336 - 0.00052 19.7 0.1 0.0018 18.0 0.1 1.9 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF94336 - 0.00081 19.3 0.0 0.0014 18.6 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 ORF94336 - 0.0015 18.8 0.2 0.012 15.9 0.1 2.4 2 1 0 2 2 1 1 AAA domain AAA_16 PF13191.6 ORF94336 - 0.0015 18.9 0.2 0.0052 17.2 0.2 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 ORF94336 - 0.0052 17.0 0.1 1.3 9.2 0.0 2.7 1 1 0 2 2 2 1 AAA domain AAA PF00004.29 ORF94336 - 0.0056 17.1 0.0 0.019 15.4 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 ORF94336 - 0.045 13.5 0.1 1 9.0 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_25 PF13481.6 ORF94336 - 0.045 13.3 0.2 0.15 11.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain ZZ PF00569.17 ORF94336 - 0.073 12.9 5.4 0.14 11.9 5.4 1.5 1 0 0 1 1 1 0 Zinc finger, ZZ type AAA_33 PF13671.6 ORF94336 - 0.097 12.8 0.0 0.24 11.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain AI-2E_transport PF01594.16 ORF94336 - 0.1 11.7 0.1 0.17 11.0 0.1 1.3 1 0 0 1 1 1 0 AI-2E family transporter AAA_5 PF07728.14 ORF94336 - 0.13 12.3 0.0 4.4 7.3 0.0 2.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF94336 - 0.17 12.4 0.0 0.43 11.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain HemY_N PF07219.13 ORF64505 - 0.075 13.2 5.6 5.7 7.2 0.8 3.4 3 0 0 3 3 3 0 HemY protein N-terminus STT3 PF02516.14 ORF64909 - 4.6e-41 141.3 13.2 7.5e-35 120.8 11.5 2.1 2 0 0 2 2 2 2 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.6 ORF64909 - 2.3 8.4 12.2 0.67 10.1 7.8 2.3 2 0 0 2 2 2 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Dynein_C PF18199.1 ORF94167 - 2.5e-98 329.1 0.0 3.9e-98 328.4 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF94167 - 8.1e-57 191.6 0.2 1.7e-56 190.6 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF94167 - 1.7e-42 144.3 0.1 3.5e-42 143.3 0.1 1.6 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain Peptidase_C2 PF00648.21 ORF77677 - 4.5e-53 180.2 2.9 6.8e-53 179.6 2.9 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease Dynein_C PF18199.1 ORF47441 - 2.5e-98 329.1 0.0 3.9e-98 328.4 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF47441 - 8.1e-57 191.6 0.2 1.7e-56 190.6 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF47441 - 1.7e-42 144.3 0.1 3.5e-42 143.3 0.1 1.6 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF45630 - 2.5e-98 329.1 0.0 3.9e-98 328.4 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF45630 - 8.1e-57 191.6 0.2 1.7e-56 190.6 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF45630 - 1.7e-42 144.3 0.1 3.5e-42 143.3 0.1 1.6 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain STT3 PF02516.14 ORF42453 - 4.5e-41 141.3 13.2 7.5e-35 120.8 11.5 2.1 2 0 0 2 2 2 2 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.6 ORF42453 - 2.3 8.4 12.2 0.67 10.2 7.8 2.3 2 0 0 2 2 2 0 Dolichyl-phosphate-mannose-protein mannosyltransferase Peptidase_C2 PF00648.21 ORF35662 - 4.5e-53 180.2 2.9 6.8e-53 179.6 2.9 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease zf-RING_2 PF13639.6 ORF31642 - 1.7e-08 34.7 4.7 1.7e-08 34.7 4.7 3.0 3 0 0 3 3 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF31642 - 5.2e-07 29.4 7.1 1.9e-06 27.6 7.1 2.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF31642 - 9.3e-07 28.7 6.1 4.2e-06 26.6 6.1 2.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF31642 - 1.1e-06 28.6 3.0 3.3e-06 27.0 3.0 1.9 1 0 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF31642 - 0.00013 22.2 2.4 0.00013 22.2 2.4 2.5 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF31642 - 0.00017 21.6 1.0 0.00085 19.3 1.0 2.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 ORF31642 - 0.00034 20.3 3.1 0.00034 20.3 3.1 2.3 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF31642 - 0.00056 19.7 6.0 0.0015 18.3 6.0 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF31642 - 0.0039 17.3 5.1 0.022 14.9 5.1 2.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING DUF4448 PF14610.6 ORF31642 - 0.034 13.9 0.0 0.07 12.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) TMEM154 PF15102.6 ORF31642 - 0.067 13.1 0.0 0.17 11.8 0.0 1.7 1 0 0 1 1 1 0 TMEM154 protein family Prok-RING_4 PF14447.6 ORF31642 - 0.093 12.6 5.3 0.35 10.7 5.3 2.1 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 RINGv PF12906.7 ORF31642 - 0.13 12.5 4.0 0.3 11.2 4.0 1.7 1 0 0 1 1 1 0 RING-variant domain DUF2129 PF09902.9 ORF31642 - 0.19 11.8 3.5 0.44 10.6 3.5 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2129) Zn_ribbon_17 PF17120.5 ORF31642 - 1 9.0 9.1 0.059 13.0 2.6 2.5 2 0 0 2 2 1 0 Zinc-ribbon, C4HC2 type DENN PF02141.21 ORF16811 - 3.6e-19 69.4 0.2 7.3e-19 68.4 0.2 1.6 1 0 0 1 1 1 1 DENN (AEX-3) domain dDENN PF03455.19 ORF16811 - 0.0014 18.6 3.3 0.0014 18.6 3.3 2.0 2 0 0 2 2 2 1 dDENN domain IBR PF01485.21 ORF16811 - 0.22 11.8 5.2 0.057 13.7 0.8 2.3 3 0 0 3 3 3 0 IBR domain, a half RING-finger domain Pet100 PF09803.9 ORF16811 - 0.52 10.9 3.5 0.49 11.0 0.4 2.7 2 0 0 2 2 2 0 Pet100 Dynein_C PF18199.1 ORF106072 - 2.5e-98 329.1 0.0 3.9e-98 328.4 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF106072 - 8.1e-57 191.6 0.2 1.7e-56 190.6 0.2 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF106072 - 1.7e-42 144.3 0.1 3.5e-42 143.3 0.1 1.6 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain NCD2 PF04905.13 ORF52310 - 0.017 15.1 2.3 0.017 15.1 2.3 2.5 2 0 0 2 2 2 0 NAB conserved region 2 (NCD2) NCD2 PF04905.13 ORF2621 - 0.017 15.1 2.3 0.017 15.1 2.3 2.5 2 0 0 2 2 2 0 NAB conserved region 2 (NCD2) NCD2 PF04905.13 ORF142740 - 0.017 15.1 2.3 0.017 15.1 2.3 2.5 2 0 0 2 2 2 0 NAB conserved region 2 (NCD2) NCD2 PF04905.13 ORF131394 - 0.017 15.1 2.3 0.017 15.1 2.3 2.5 2 0 0 2 2 2 0 NAB conserved region 2 (NCD2) NCD2 PF04905.13 ORF122710 - 0.017 15.1 2.3 0.017 15.1 2.3 2.5 2 0 0 2 2 2 0 NAB conserved region 2 (NCD2) EF-hand_7 PF13499.6 ORF62895 - 1.7e-21 76.4 25.2 7.4e-06 26.3 1.2 6.8 6 1 0 6 6 6 5 EF-hand domain pair EF-hand_1 PF00036.32 ORF62895 - 7.7e-19 65.8 17.0 0.0033 16.9 0.6 8.7 7 1 0 7 7 7 6 EF hand EF-hand_6 PF13405.6 ORF62895 - 3.3e-18 64.0 23.6 0.015 15.2 1.1 10.3 8 2 1 9 9 9 6 EF-hand domain EF-hand_8 PF13833.6 ORF62895 - 2.6e-09 36.8 13.0 0.33 10.8 0.8 6.7 6 0 0 6 6 6 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF62895 - 3e-08 32.8 16.4 0.075 12.6 0.0 7.0 8 0 0 8 8 8 3 EF hand EF-hand_11 PF08976.11 ORF62895 - 0.22 12.4 3.3 1.5 9.7 0.0 3.6 4 0 0 4 4 4 0 EF-hand domain Glycos_transf_2 PF00535.26 ORF32472 - 1.3e-24 87.0 0.0 2.9e-24 85.8 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF32472 - 2.1e-08 34.3 0.0 4.8e-08 33.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 ORF32472 - 0.00038 20.9 0.0 0.0015 19.0 0.0 2.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 ORF32472 - 0.0013 18.3 0.0 0.002 17.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 TLV_coat PF00429.19 ORF32472 - 0.039 12.6 0.0 0.061 12.0 0.0 1.2 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) EF-hand_7 PF13499.6 ORF137724 - 1.7e-21 76.4 25.2 7.4e-06 26.3 1.2 6.8 6 1 0 6 6 6 5 EF-hand domain pair EF-hand_1 PF00036.32 ORF137724 - 7.7e-19 65.8 17.0 0.0033 16.9 0.6 8.7 7 1 0 7 7 7 6 EF hand EF-hand_6 PF13405.6 ORF137724 - 3.3e-18 64.0 23.6 0.015 15.2 1.1 10.3 8 2 1 9 9 9 6 EF-hand domain EF-hand_8 PF13833.6 ORF137724 - 2.6e-09 36.8 13.0 0.33 10.8 0.8 6.7 6 0 0 6 6 6 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF137724 - 3e-08 32.8 16.4 0.075 12.6 0.0 7.0 8 0 0 8 8 8 3 EF hand EF-hand_11 PF08976.11 ORF137724 - 0.22 12.4 3.3 1.5 9.7 0.0 3.6 4 0 0 4 4 4 0 EF-hand domain Kinesin PF00225.23 ORF132913 - 2.5e-123 411.3 1.3 2.5e-123 411.3 1.3 2.8 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF132913 - 6.8e-26 91.0 0.2 6.8e-26 91.0 0.2 2.3 2 0 0 2 2 2 1 Microtubule binding Kinesin_assoc PF16183.5 ORF132913 - 0.0046 17.1 5.1 0.0046 17.1 5.1 3.6 3 1 0 4 4 4 1 Kinesin-associated Syntaxin-6_N PF09177.11 ORF132913 - 0.021 15.4 2.9 0.021 15.4 2.9 3.6 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF2744 PF10910.8 ORF132913 - 0.027 14.4 0.1 0.083 12.9 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2744) AAA_22 PF13401.6 ORF132913 - 0.054 13.8 2.8 7.9 6.7 0.0 3.2 2 1 0 2 2 2 0 AAA domain Ketoacyl-synt_C PF02801.22 ORF75410 - 2.5e-32 111.4 0.4 4.4e-32 110.6 0.4 1.4 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ketoacyl-synt PF00109.26 ORF75410 - 7.3e-31 107.6 0.0 2.2e-30 106.1 0.0 1.7 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain AMPK1_CBM PF16561.5 ORF75410 - 0.001 19.2 0.0 0.0027 17.9 0.0 1.7 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase KAsynt_C_assoc PF16197.5 ORF75410 - 0.0058 17.1 0.0 0.011 16.1 0.0 1.4 1 0 0 1 1 1 1 Ketoacyl-synthetase C-terminal extension He_PIG PF05345.12 ORF44441 - 2.1e-25 88.6 100.1 9.4e-09 35.3 9.5 10.5 11 1 0 11 11 11 6 Putative Ig domain Y_Y_Y PF07495.13 ORF44441 - 0.00015 21.6 7.9 1.6 8.8 0.1 5.8 5 0 0 5 5 5 2 Y_Y_Y domain ChitinaseA_N PF08329.10 ORF44441 - 0.001 18.7 4.9 0.0081 15.8 0.1 3.9 5 0 0 5 5 5 1 Chitinase A, N-terminal domain Cadherin PF00028.17 ORF44441 - 0.002 18.6 11.7 1.8 9.0 0.1 6.3 5 2 3 8 8 8 2 Cadherin domain DUF5305 PF17231.2 ORF44441 - 0.0021 17.5 0.0 0.0021 17.5 0.0 4.3 5 1 0 5 5 5 1 Family of unknown function (DUF5305) PKD PF00801.20 ORF44441 - 0.0043 16.9 39.6 0.13 12.2 1.7 8.3 8 1 0 8 8 8 4 PKD domain DUF5627 PF18620.1 ORF44441 - 9.8 6.1 17.1 0.59 10.0 2.6 3.8 4 1 0 4 4 4 0 Family of unknown function (DUF5627) Adaptin_N PF01602.20 ORF135026 - 1.7e-114 383.3 20.0 2.2e-114 382.9 20.0 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Alpha_adaptinC2 PF02883.20 ORF135026 - 2.2e-22 79.4 3.1 4.7e-22 78.4 3.1 1.5 1 0 0 1 1 1 1 Adaptin C-terminal domain Cnd1 PF12717.7 ORF135026 - 4.4e-06 26.8 18.4 0.002 18.2 4.5 3.7 3 1 1 4 4 4 2 non-SMC mitotic condensation complex subunit 1 PI_PP_C PF18365.1 ORF135026 - 0.00032 20.7 0.5 0.027 14.5 0.2 3.0 2 0 0 2 2 2 1 Phosphoinositide phosphatase C-terminal domain Dopey_N PF04118.14 ORF135026 - 0.0032 16.6 0.8 0.0092 15.1 0.8 1.7 1 0 0 1 1 1 1 Dopey, N-terminal DNA_alkylation PF08713.11 ORF135026 - 0.026 14.3 0.0 0.082 12.6 0.0 1.9 2 0 0 2 2 2 0 DNA alkylation repair enzyme Vac14_Fab1_bd PF12755.7 ORF135026 - 0.048 14.2 2.8 2.9 8.5 0.1 3.7 2 1 1 3 3 3 0 Vacuolar 14 Fab1-binding region HEAT PF02985.22 ORF135026 - 0.089 13.1 0.0 3.9 8.0 0.0 3.4 3 0 0 3 3 3 0 HEAT repeat IBD PF10416.9 ORF135026 - 0.11 12.6 1.6 0.2 11.7 0.5 2.1 2 0 0 2 2 2 0 Transcription-initiator DNA-binding domain IBD DNA_ligase_A_N PF04675.14 ORF135026 - 1.9 8.8 4.8 1.1e+02 3.1 0.0 3.2 2 2 0 2 2 2 0 DNA ligase N terminus Nucleoporin_FG PF13634.6 ORF135026 - 8.3 7.3 8.7 30 5.5 8.5 1.9 1 1 0 1 1 1 0 Nucleoporin FG repeat region AHSP PF09236.10 ORF33389 - 0.059 13.8 1.4 14 6.2 0.1 3.2 2 0 0 2 2 2 0 Alpha-haemoglobin stabilising protein CK2S PF15011.6 ORF33389 - 0.11 12.4 0.7 5.4 6.9 0.0 2.9 3 0 0 3 3 3 0 Casein Kinase 2 substrate DUF5595 PF18077.1 ORF33389 - 0.12 12.5 0.1 0.12 12.5 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF5595) Hum_adeno_E3A PF05393.11 ORF70824 - 8.1 6.5 7.9 1.8 8.6 0.2 3.1 3 0 0 3 3 3 0 Human adenovirus early E3A glycoprotein Coatomer_WDAD PF04053.14 ORF51160 - 9.8e-10 38.0 12.8 3e-06 26.6 0.0 4.7 4 1 1 5 5 5 3 Coatomer WD associated region Clathrin PF00637.20 ORF51160 - 2.4e-05 24.2 15.2 8.7e-05 22.4 2.9 4.7 2 1 3 5 5 5 2 Region in Clathrin and VPS TPR_7 PF13176.6 ORF51160 - 0.017 15.1 8.9 1.2 9.4 0.2 5.6 4 2 1 5 5 5 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF51160 - 0.72 10.1 27.1 0.44 10.8 0.6 7.5 7 1 0 7 7 7 0 Tetratricopeptide repeat zf-RING_4 PF14570.6 ORF51160 - 5.3 6.9 8.3 16 5.4 8.3 1.9 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Coatomer_WDAD PF04053.14 ORF47045 - 9.8e-10 38.0 12.8 3e-06 26.6 0.0 4.7 4 1 1 5 5 5 3 Coatomer WD associated region Clathrin PF00637.20 ORF47045 - 2.4e-05 24.2 15.2 8.7e-05 22.4 2.9 4.7 2 1 3 5 5 5 2 Region in Clathrin and VPS TPR_7 PF13176.6 ORF47045 - 0.017 15.1 8.9 1.2 9.4 0.2 5.6 4 2 1 5 5 5 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF47045 - 0.72 10.1 27.1 0.44 10.8 0.6 7.5 7 1 0 7 7 7 0 Tetratricopeptide repeat zf-RING_4 PF14570.6 ORF47045 - 5.3 6.9 8.3 16 5.4 8.3 1.9 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DEAD PF00270.29 ORF38785 - 2.9e-47 160.7 0.1 8.1e-47 159.2 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF38785 - 1e-30 106.3 1.6 3.4e-28 98.2 0.0 3.6 4 0 0 4 4 4 1 Helicase conserved C-terminal domain GUCT PF08152.12 ORF38785 - 1.8e-22 79.5 0.0 8.8e-22 77.2 0.0 2.3 1 0 0 1 1 1 1 GUCT (NUC152) domain ResIII PF04851.15 ORF38785 - 4.6e-06 26.7 0.1 1.1e-05 25.5 0.1 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit MaoC_dehydratas PF01575.19 ORF38785 - 0.00062 19.3 0.0 0.0012 18.4 0.0 1.4 1 0 0 1 1 1 1 MaoC like domain ERCC3_RAD25_C PF16203.5 ORF38785 - 0.0013 18.0 0.1 0.005 16.1 0.1 2.0 1 1 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Rhabdo_matrix PF03397.14 ORF38785 - 0.034 13.9 0.0 0.11 12.3 0.0 1.8 1 1 0 1 1 1 0 Rhabdovirus matrix protein AAA_22 PF13401.6 ORF38785 - 0.047 14.0 0.2 0.22 11.8 0.1 2.2 3 0 0 3 3 3 0 AAA domain Peptidase_M14 PF00246.24 ORF2656 - 1.3e-18 67.8 0.0 3.7e-18 66.3 0.0 1.7 1 1 0 1 1 1 1 Zinc carboxypeptidase Pepdidase_M14_N PF18027.1 ORF2656 - 5e-13 49.4 1.0 1.2e-12 48.1 0.4 2.0 2 0 0 2 2 2 1 Cytosolic carboxypeptidase N-terminal domain Med30 PF11315.8 ORF2656 - 0.0023 18.2 0.8 0.01 16.1 0.8 2.1 1 0 0 1 1 1 1 Mediator complex subunit 30 Linker_histone PF00538.19 ORF2656 - 2.1 8.8 5.8 3.6 8.0 2.9 2.6 2 0 0 2 2 2 0 linker histone H1 and H5 family Inhibitor_I34 PF10466.9 ORF2656 - 8.6 7.0 9.8 0.21 12.2 2.0 2.4 2 1 1 3 3 3 0 Saccharopepsin inhibitor I34 zf-RING_2 PF13639.6 ORF132142 - 2e-12 47.2 4.5 2e-12 47.2 4.5 3.1 3 0 0 3 3 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF132142 - 6.6e-09 35.4 3.3 6.6e-09 35.4 3.3 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF132142 - 4.3e-08 32.9 3.4 1.3e-07 31.3 3.4 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF132142 - 3.5e-07 30.4 3.7 3.5e-07 30.4 3.7 3.0 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF132142 - 3.9e-07 30.0 1.3 1.3e-06 28.3 1.3 2.0 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF132142 - 4.3e-07 29.7 4.9 4.3e-07 29.7 4.9 2.5 3 0 0 3 3 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF132142 - 1.1e-06 28.6 1.6 1.1e-06 28.6 1.6 2.3 2 0 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF132142 - 1.4e-06 28.1 5.0 1.4e-06 28.1 5.0 2.6 2 0 0 2 2 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF132142 - 2.3e-05 24.1 3.5 2.3e-05 24.1 3.5 2.7 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 ORF132142 - 0.00034 20.7 4.5 0.0017 18.5 4.5 2.3 1 0 0 1 1 1 1 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF132142 - 0.00043 19.9 2.8 0.00043 19.9 2.8 2.3 2 0 0 2 2 1 1 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 ORF132142 - 0.00092 19.1 0.6 0.00092 19.1 0.6 3.9 5 0 0 5 5 3 1 Prokaryotic RING finger family 1 CD34_antigen PF06365.12 ORF132142 - 0.0012 18.4 0.5 0.0025 17.4 0.5 1.4 1 0 0 1 1 1 1 CD34/Podocalyxin family Prok-RING_4 PF14447.6 ORF132142 - 0.0013 18.6 4.7 0.0072 16.2 4.7 2.4 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 PHD PF00628.29 ORF132142 - 0.0041 17.0 5.7 0.0041 17.0 5.7 2.6 2 0 0 2 2 1 1 PHD-finger zf-RING_4 PF14570.6 ORF132142 - 0.0058 16.4 4.6 0.028 14.2 4.6 2.3 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain RINGv PF12906.7 ORF132142 - 0.011 15.8 5.3 0.011 15.8 5.3 2.4 2 0 0 2 2 1 0 RING-variant domain zf-C3HC4_4 PF15227.6 ORF132142 - 0.018 15.2 2.2 0.018 15.2 2.2 2.7 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING FRG1 PF06229.12 ORF132142 - 0.031 14.0 0.2 0.073 12.8 0.2 1.6 1 0 0 1 1 1 0 FRG1-like domain EphA2_TM PF14575.6 ORF132142 - 0.041 14.8 0.1 0.17 12.8 0.1 2.0 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF4834 PF16118.5 ORF132142 - 0.043 14.8 2.0 0.1 13.6 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) MAP17 PF15807.5 ORF132142 - 0.045 14.0 0.5 0.13 12.5 0.5 1.7 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Phage_sheath_1N PF17481.2 ORF132142 - 0.047 14.2 0.8 0.047 14.2 0.8 2.1 2 0 0 2 2 1 0 Phage tail sheath protein beta-sandwich domain Peptidase_M56 PF05569.11 ORF132142 - 0.053 12.7 0.5 0.096 11.9 0.5 1.3 1 0 0 1 1 1 0 BlaR1 peptidase M56 zf-Nse PF11789.8 ORF132142 - 0.055 13.3 1.1 0.12 12.2 1.1 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit TMEM154 PF15102.6 ORF132142 - 0.1 12.5 0.8 0.41 10.6 0.8 2.0 1 0 0 1 1 1 0 TMEM154 protein family DUF5383 PF17355.2 ORF132142 - 0.1 13.0 0.3 0.31 11.4 0.3 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5383) DUF3149 PF11346.8 ORF132142 - 4.4 7.0 6.1 1.5 8.5 2.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) DUF4215 PF13948.6 ORF119467 - 1.8e-17 63.5 65.5 4.4e-07 30.2 4.0 5.9 5 1 0 5 5 5 5 Domain of unknown function (DUF4215) HrpB_C PF08482.10 ORF913 - 1.5e-54 183.9 0.1 3.8e-54 182.7 0.1 1.7 1 0 0 1 1 1 1 ATP-dependent helicase C-terminal Helicase_C PF00271.31 ORF913 - 5.6e-11 42.8 0.0 9.9e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF913 - 1.3e-09 38.1 0.0 2.3e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase HA2 PF04408.23 ORF913 - 8.9e-08 32.4 0.1 2.3e-07 31.1 0.1 1.7 1 0 0 1 1 1 1 Helicase associated domain (HA2) TMF_TATA_bd PF12325.8 ORF80079 - 0.00075 19.7 5.3 0.00075 19.7 5.3 7.9 3 1 3 7 7 7 2 TATA element modulatory factor 1 TATA binding TSC22 PF01166.18 ORF80079 - 0.0025 18.1 0.7 0.0025 18.1 0.7 9.1 8 3 2 10 10 10 1 TSC-22/dip/bun family TPR_MLP1_2 PF07926.12 ORF80079 - 0.0038 17.3 9.3 0.0038 17.3 9.3 7.2 3 2 3 6 6 6 1 TPR/MLP1/MLP2-like protein DUF1461 PF07314.11 ORF80079 - 0.3 11.0 0.6 1.2 9.0 0.6 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1461) PEP-utilizers_C PF02896.18 ORF6710 - 1.9e-114 381.8 0.0 2.5e-114 381.4 0.0 1.1 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PTS_EIIA_2 PF00359.22 ORF6710 - 5.4e-31 107.4 0.0 9.7e-31 106.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PEP-utilizers PF00391.23 ORF6710 - 5.7e-16 58.0 0.0 1.5e-15 56.7 0.0 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PTS-HPr PF00381.19 ORF6710 - 4.2e-12 46.1 0.0 1.2e-11 44.7 0.0 1.8 1 0 0 1 1 1 1 PTS HPr component phosphorylation site PEP-utilisers_N PF05524.13 ORF6710 - 5.2e-11 42.7 0.3 1.9e-10 40.9 0.0 2.1 2 0 0 2 2 2 1 PEP-utilising enzyme, N-terminal Kinesin PF00225.23 ORF27431 - 2.4e-123 411.3 1.3 2.4e-123 411.3 1.3 2.8 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF27431 - 6.7e-26 91.0 0.2 6.7e-26 91.0 0.2 2.3 2 0 0 2 2 2 1 Microtubule binding Kinesin_assoc PF16183.5 ORF27431 - 0.0046 17.1 5.2 0.0046 17.1 5.2 3.6 3 1 0 4 4 4 1 Kinesin-associated Syntaxin-6_N PF09177.11 ORF27431 - 0.022 15.3 3.0 0.022 15.3 3.0 3.6 1 1 1 2 2 2 0 Syntaxin 6, N-terminal DUF2744 PF10910.8 ORF27431 - 0.027 14.4 0.1 0.082 12.9 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2744) AAA_22 PF13401.6 ORF27431 - 0.051 13.9 2.8 7.8 6.8 0.0 3.2 2 1 0 2 2 2 0 AAA domain C2 PF00168.30 ORF40224 - 7.3e-06 26.2 0.0 0.2 12.0 0.0 3.5 4 0 0 4 4 4 2 C2 domain Pkinase PF00069.25 ORF98037 - 1.2e-37 129.7 0.0 1.5e-20 73.7 0.0 3.4 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF98037 - 3.1e-10 39.8 0.2 0.0018 17.6 0.0 3.3 2 1 0 2 2 2 2 Protein tyrosine kinase Pkinase PF00069.25 ORF49482 - 1.2e-37 129.7 0.0 1.5e-20 73.7 0.0 3.4 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49482 - 3.1e-10 39.8 0.2 0.0018 17.6 0.0 3.3 2 1 0 2 2 2 2 Protein tyrosine kinase Pkinase PF00069.25 ORF28894 - 1.2e-37 129.7 0.0 1.5e-20 73.7 0.0 3.4 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF28894 - 3.1e-10 39.8 0.2 0.0018 17.6 0.0 3.3 2 1 0 2 2 2 2 Protein tyrosine kinase Response_reg PF00072.24 ORF84927 - 4e-11 43.1 0.2 2.3e-10 40.6 0.1 2.5 2 1 0 2 2 2 1 Response regulator receiver domain HATPase_c PF02518.26 ORF84927 - 3.4e-09 37.2 0.1 1e-08 35.6 0.1 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 ORF33455 - 1.4e-10 41.3 0.2 7.8e-10 38.9 0.1 2.5 2 0 0 2 2 2 1 Response regulator receiver domain HATPase_c PF02518.26 ORF33455 - 3.4e-09 37.2 0.1 1e-08 35.6 0.1 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 ORF2859 - 4e-11 43.1 0.2 2.3e-10 40.6 0.1 2.5 2 1 0 2 2 2 1 Response regulator receiver domain HATPase_c PF02518.26 ORF2859 - 3.4e-09 37.2 0.1 1e-08 35.6 0.1 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HSP90 PF00183.18 ORF71310 - 1.4e-181 605.0 29.9 2.1e-181 604.3 29.9 1.4 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF71310 - 2.2e-14 53.9 0.2 4.7e-14 52.9 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF71310 - 4.5e-13 49.2 0.2 1.2e-12 47.8 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CobT PF06213.12 ORF71310 - 0.0049 16.3 10.2 0.0049 16.3 10.2 4.0 4 0 0 4 4 4 2 Cobalamin biosynthesis protein CobT HSP90 PF00183.18 ORF62580 - 1.4e-181 605.0 29.9 2.1e-181 604.3 29.9 1.4 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF62580 - 2.2e-14 53.9 0.2 4.7e-14 52.9 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF62580 - 4.5e-13 49.2 0.2 1.2e-12 47.8 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CobT PF06213.12 ORF62580 - 0.0049 16.3 10.2 0.0049 16.3 10.2 4.0 4 0 0 4 4 4 2 Cobalamin biosynthesis protein CobT Ank_2 PF12796.7 ORF39704 - 4.5e-23 81.6 0.1 1.8e-11 44.5 0.0 3.7 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF39704 - 6.4e-21 74.5 0.4 8.7e-11 42.1 0.0 4.6 3 1 2 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF39704 - 1.9e-19 69.2 1.1 1e-06 28.9 0.1 5.1 5 0 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 ORF39704 - 5.7e-18 63.2 0.2 1.2e-05 25.2 0.0 5.3 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 ORF39704 - 3.8e-14 52.6 1.6 5e-07 29.9 0.0 5.0 3 1 2 5 5 5 2 Ankyrin repeats (many copies) Chordopox_A30L PF06015.12 ORF39704 - 0.17 11.7 0.1 0.37 10.6 0.1 1.5 1 0 0 1 1 1 0 Chordopoxvirus A30L protein VWA PF00092.28 ORF34967 - 1.5e-09 38.4 1.3 2.2e-08 34.5 0.0 3.2 3 0 0 3 3 3 1 von Willebrand factor type A domain VWA_2 PF13519.6 ORF34967 - 2.4e-09 37.8 5.5 3.4e-07 30.9 0.0 4.7 5 0 0 5 5 5 2 von Willebrand factor type A domain DUF2201 PF09967.9 ORF34967 - 0.01 16.0 0.0 0.044 13.9 0.0 2.2 1 0 0 1 1 1 0 VWA-like domain (DUF2201) vWA-TerF-like PF10138.9 ORF34967 - 0.016 15.3 0.8 0.051 13.7 0.0 2.3 2 0 0 2 2 2 0 vWA found in TerF C terminus SAP PF02037.27 ORF34967 - 0.044 13.6 0.1 0.18 11.6 0.1 2.1 1 0 0 1 1 1 0 SAP domain HSP90 PF00183.18 ORF137741 - 1.4e-181 605.0 29.9 2.1e-181 604.3 29.9 1.4 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF137741 - 2.2e-14 53.9 0.2 4.7e-14 52.9 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF137741 - 4.5e-13 49.2 0.2 1.2e-12 47.8 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CobT PF06213.12 ORF137741 - 0.0049 16.3 10.2 0.0049 16.3 10.2 4.0 4 0 0 4 4 4 2 Cobalamin biosynthesis protein CobT HSP90 PF00183.18 ORF135780 - 1.4e-181 605.0 29.9 2.1e-181 604.3 29.9 1.4 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF135780 - 2.2e-14 53.9 0.2 4.7e-14 52.9 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF135780 - 4.5e-13 49.2 0.2 1.2e-12 47.8 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CobT PF06213.12 ORF135780 - 0.0049 16.3 10.2 0.0049 16.3 10.2 4.0 4 0 0 4 4 4 2 Cobalamin biosynthesis protein CobT AAA PF00004.29 ORF55173 - 7.4e-07 29.7 0.0 1e-05 26.0 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 ORF55173 - 0.00019 21.4 1.5 0.63 9.9 0.0 3.6 3 0 0 3 3 3 1 NACHT domain AAA_22 PF13401.6 ORF55173 - 0.0002 21.6 0.2 0.88 9.8 0.0 2.8 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.6 ORF55173 - 0.00049 20.5 0.4 0.0034 17.8 0.1 2.8 2 1 1 3 3 3 1 AAA ATPase domain AAA_30 PF13604.6 ORF55173 - 0.0011 18.8 0.0 0.021 14.6 0.0 2.4 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 ORF55173 - 0.0016 18.2 0.0 0.0049 16.6 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein Viral_helicase1 PF01443.18 ORF55173 - 0.002 17.9 0.0 0.0036 17.1 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_14 PF13173.6 ORF55173 - 0.005 16.9 0.0 0.0096 16.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF55173 - 0.0054 17.1 1.1 1.6 9.1 0.2 3.1 2 1 1 3 3 3 1 AAA domain RuvB_N PF05496.12 ORF55173 - 0.015 15.0 0.0 0.033 14.0 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Zeta_toxin PF06414.12 ORF55173 - 0.016 14.5 0.0 0.067 12.5 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin AAA_11 PF13086.6 ORF55173 - 0.021 14.6 0.0 0.04 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 ORF55173 - 0.058 13.4 0.0 0.21 11.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) Adeno_IVa2 PF02456.15 ORF55173 - 0.068 12.0 0.0 0.16 10.7 0.0 1.5 1 0 0 1 1 1 0 Adenovirus IVa2 protein KAP_NTPase PF07693.14 ORF55173 - 0.16 11.1 0.0 0.29 10.3 0.0 1.3 1 0 0 1 1 1 0 KAP family P-loop domain Mac PF12464.8 ORF55173 - 0.83 9.9 2.8 31 4.9 0.6 2.8 2 0 0 2 2 2 0 Maltose acetyltransferase zf-RING_2 PF13639.6 ORF40009 - 5.3e-09 36.3 7.7 5.3e-09 36.3 7.7 3.4 4 0 0 4 4 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF40009 - 4.6e-08 32.7 10.3 6.4e-08 32.2 6.6 2.8 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF40009 - 2.2e-06 27.4 7.4 2.2e-06 27.4 7.4 3.3 4 0 0 4 4 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF40009 - 9.4e-05 22.3 7.7 9.4e-05 22.3 7.7 3.2 3 0 0 3 3 2 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF40009 - 0.00013 21.7 6.1 0.00054 19.8 6.1 2.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF40009 - 0.00021 21.2 3.9 0.00021 21.2 3.9 2.3 2 0 0 2 2 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF40009 - 0.00033 20.9 4.7 0.00033 20.9 4.7 2.5 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF40009 - 0.0023 18.0 1.7 0.0069 16.4 1.7 1.9 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Rax2 PF12768.7 ORF40009 - 0.0029 17.1 0.1 0.0066 15.9 0.1 1.7 1 0 0 1 1 1 1 Cortical protein marker for cell polarity MAP17 PF15807.5 ORF40009 - 0.0031 17.7 0.0 0.0065 16.7 0.0 1.4 1 0 0 1 1 1 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 LRR19-TM PF15176.6 ORF40009 - 0.0087 16.0 0.0 0.021 14.8 0.0 1.6 1 0 0 1 1 1 1 Leucine-rich repeat family 19 TM domain Protocadherin PF08374.11 ORF40009 - 0.014 15.4 0.1 0.03 14.3 0.1 1.5 1 0 0 1 1 1 0 Protocadherin EphA2_TM PF14575.6 ORF40009 - 0.026 15.4 0.0 0.12 13.3 0.0 2.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain zf-Nse PF11789.8 ORF40009 - 0.044 13.6 5.1 0.12 12.2 5.1 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_ribbon_17 PF17120.5 ORF40009 - 7 6.4 13.4 0.14 11.8 5.4 2.5 2 0 0 2 2 1 0 Zinc-ribbon, C4HC2 type Peptidase_M14 PF00246.24 ORF41502 - 1.3e-18 67.9 0.0 3.6e-18 66.4 0.0 1.7 1 1 0 1 1 1 1 Zinc carboxypeptidase Pepdidase_M14_N PF18027.1 ORF41502 - 4.6e-13 49.5 1.0 1.2e-12 48.2 0.4 2.0 2 0 0 2 2 2 1 Cytosolic carboxypeptidase N-terminal domain Med30 PF11315.8 ORF41502 - 0.0023 18.2 0.8 0.0098 16.1 0.8 2.1 1 0 0 1 1 1 1 Mediator complex subunit 30 Linker_histone PF00538.19 ORF41502 - 2 8.8 5.8 3.5 8.1 2.9 2.6 2 0 0 2 2 2 0 linker histone H1 and H5 family Inhibitor_I34 PF10466.9 ORF41502 - 8.7 7.0 9.9 0.21 12.2 2.0 2.4 2 1 1 3 3 3 0 Saccharopepsin inhibitor I34 C2 PF00168.30 ORF123065 - 4.1e-31 107.3 0.0 4.4e-11 43.0 0.0 4.5 4 0 0 4 4 4 4 C2 domain FerI PF08151.12 ORF123065 - 0.0021 18.1 0.0 0.0049 16.9 0.0 1.6 1 0 0 1 1 1 1 FerI (NUC094) domain Prefoldin PF02996.17 ORF123065 - 0.74 9.7 4.1 1.4 8.9 4.1 1.4 1 0 0 1 1 1 0 Prefoldin subunit HMG-CoA_red PF00368.18 ORF108510 - 8.6e-93 311.3 1.2 1.2e-92 310.8 1.2 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Lon_C PF05362.13 ORF92450 - 6.3e-68 228.3 0.3 1.6e-45 155.2 0.1 2.5 2 0 0 2 2 2 2 Lon protease (S16) C-terminal proteolytic domain AAA PF00004.29 ORF92450 - 1.8e-22 80.1 0.0 4.6e-22 78.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF92450 - 8.7e-10 38.7 0.0 2.7e-09 37.2 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) LON_substr_bdg PF02190.16 ORF92450 - 1.1e-09 38.5 5.4 1.1e-09 38.5 5.4 2.1 2 0 0 2 2 2 1 ATP-dependent protease La (LON) substrate-binding domain ChlI PF13541.6 ORF92450 - 1.5e-07 31.3 0.1 7.2e-07 29.1 0.0 2.3 2 0 0 2 2 2 1 Subunit ChlI of Mg-chelatase AAA_2 PF07724.14 ORF92450 - 5.9e-06 26.5 0.0 2.4e-05 24.5 0.0 2.1 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_PrkA PF08298.11 ORF92450 - 1.6e-05 24.0 0.2 4.7e-05 22.5 0.0 1.8 2 0 0 2 2 2 1 PrkA AAA domain RuvB_N PF05496.12 ORF92450 - 0.00017 21.4 0.0 0.00057 19.7 0.0 1.8 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain IstB_IS21 PF01695.17 ORF92450 - 0.00019 21.2 0.2 0.0011 18.7 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_18 PF13238.6 ORF92450 - 0.00059 20.4 0.5 0.0052 17.3 0.1 2.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF92450 - 0.00059 20.3 0.2 0.0045 17.4 0.1 2.2 1 1 1 2 2 2 1 AAA ATPase domain AAA_3 PF07726.11 ORF92450 - 0.00078 19.3 0.0 0.0043 16.9 0.0 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 ORF92450 - 0.0016 18.5 0.0 0.0058 16.7 0.0 2.1 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 ORF92450 - 0.0039 17.1 0.7 0.017 15.0 0.1 2.5 2 1 0 2 2 2 1 Rad17 P-loop domain AAA_22 PF13401.6 ORF92450 - 0.0048 17.2 0.1 0.076 13.3 0.1 2.6 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 ORF92450 - 0.0082 16.1 4.0 0.019 14.8 0.0 3.0 4 0 0 4 4 2 1 RsgA GTPase RNA_helicase PF00910.22 ORF92450 - 0.026 14.9 0.1 0.091 13.2 0.0 2.0 2 0 0 2 2 1 0 RNA helicase NTPase_1 PF03266.15 ORF92450 - 0.027 14.4 0.2 0.18 11.7 0.1 2.4 1 1 1 2 2 2 0 NTPase SKI PF01202.22 ORF92450 - 0.032 14.4 0.1 0.14 12.3 0.1 2.2 1 0 0 1 1 1 0 Shikimate kinase TsaE PF02367.17 ORF92450 - 0.034 14.2 0.1 0.086 12.8 0.1 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ArAE_1_C PF11728.8 ORF92450 - 0.037 14.0 4.5 0.09 12.8 2.8 2.6 1 1 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain AAA_33 PF13671.6 ORF92450 - 0.14 12.3 0.1 0.37 11.0 0.1 1.7 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 ORF92450 - 1.9 9.0 8.3 2.2 8.8 0.2 3.4 4 0 0 4 4 3 0 ABC transporter TRP PF06011.12 ORF129328 - 0.039 12.7 25.7 0.004 15.9 19.3 2.2 1 1 1 2 2 2 0 Transient receptor potential (TRP) ion channel DUF3159 PF11361.8 ORF129328 - 0.11 12.2 0.1 0.23 11.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3159) Chitin_synth_1 PF01644.17 ORF111767 - 1.4e-20 73.9 0.5 7.5e-19 68.3 0.5 2.3 1 1 0 1 1 1 1 Chitin synthase Chitin_synth_2 PF03142.15 ORF111767 - 2.6e-09 36.3 6.8 2.6e-09 36.3 6.8 2.1 1 1 1 2 2 2 1 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF111767 - 7.3e-08 32.6 0.4 7.3e-08 32.6 0.4 2.6 3 0 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF111767 - 0.0021 18.0 0.0 0.0033 17.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 DUF4337 PF14235.6 ORF111767 - 0.1 12.7 0.5 0.19 11.9 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4227 PF14004.6 ORF111767 - 0.4 10.7 5.4 1.8 8.6 5.4 2.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) tRNA-synt_1 PF00133.22 ORF111346 - 4.7e-19 68.1 0.4 4.7e-19 68.1 0.4 2.6 2 1 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF111346 - 2e-11 44.1 1.9 6e-11 42.5 1.9 1.9 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF111346 - 1.9e-05 23.6 0.2 0.00016 20.6 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF111346 - 0.0017 17.8 0.0 0.0042 16.5 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DUF2200 PF09966.9 ORF111346 - 0.046 13.9 0.2 0.19 11.9 0.2 2.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2200) Sulfatase PF00884.23 ORF14031 - 1.6e-81 274.0 0.3 2.1e-81 273.7 0.3 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF14031 - 0.014 15.0 4.5 0.041 13.5 2.8 2.3 1 1 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4994 PF16385.5 ORF14031 - 0.022 14.7 0.0 0.071 13.0 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function DUF4976 PF16347.5 ORF14031 - 0.074 13.3 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4976) Thioredoxin PF00085.20 ORF135214 - 0.014 15.4 0.1 0.03 14.3 0.1 1.6 1 0 0 1 1 1 0 Thioredoxin RACo_linker PF17650.1 ORF65060 - 0.0058 16.5 0.1 0.0058 16.5 0.1 3.1 4 0 0 4 4 4 1 RACo linker region Apolipoprotein PF01442.18 ORF65060 - 0.031 14.1 16.5 0.38 10.6 1.9 4.8 3 2 1 4 4 4 0 Apolipoprotein A1/A4/E domain DUF1664 PF07889.12 ORF65060 - 0.19 11.7 24.0 0.045 13.8 1.1 4.8 3 2 2 5 5 5 0 Protein of unknown function (DUF1664) Flg_hook PF02120.16 ORF65060 - 0.21 11.5 1.9 0.7 9.8 0.3 2.8 2 0 0 2 2 2 0 Flagellar hook-length control protein FliK Tox-REase-9 PF15650.6 ORF65060 - 0.33 11.3 6.2 0.23 11.8 0.3 3.6 4 0 0 4 4 4 0 Restriction endonuclease fold toxin 9 Ribosomal_S18 PF01084.20 ORF65060 - 0.34 11.2 2.0 3.9 7.8 0.1 3.4 3 0 0 3 3 3 0 Ribosomal protein S18 Baculo_PEP_C PF04513.12 ORF65060 - 1.8 8.6 22.9 2 8.4 0.9 4.5 4 1 0 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus Lectin_N PF03954.14 ORF65060 - 1.8 8.3 10.8 0.038 13.7 1.1 3.1 3 1 0 3 3 3 0 Hepatic lectin, N-terminal domain G-gamma PF00631.22 ORF65060 - 4.5 7.3 6.9 0.64 10.1 0.1 3.2 4 0 0 4 4 4 0 GGL domain Col_cuticle_N PF01484.17 ORF65060 - 5.1 7.3 7.1 29 4.8 0.0 4.1 3 1 1 4 4 4 0 Nematode cuticle collagen N-terminal domain RACo_linker PF17650.1 ORF56713 - 0.0058 16.5 0.1 0.0058 16.5 0.1 3.1 4 0 0 4 4 4 1 RACo linker region Apolipoprotein PF01442.18 ORF56713 - 0.031 14.2 16.5 0.38 10.6 1.9 4.8 3 2 1 4 4 4 0 Apolipoprotein A1/A4/E domain DUF1664 PF07889.12 ORF56713 - 0.19 11.8 24.0 0.045 13.8 1.1 4.8 3 2 2 5 5 5 0 Protein of unknown function (DUF1664) Flg_hook PF02120.16 ORF56713 - 0.2 11.5 1.9 0.7 9.8 0.3 2.8 2 0 0 2 2 2 0 Flagellar hook-length control protein FliK Ribosomal_S18 PF01084.20 ORF56713 - 0.28 11.4 1.8 3.5 7.9 0.1 3.4 3 0 0 3 3 3 0 Ribosomal protein S18 Tox-REase-9 PF15650.6 ORF56713 - 0.33 11.3 6.2 0.23 11.8 0.3 3.6 4 0 0 4 4 4 0 Restriction endonuclease fold toxin 9 Lectin_N PF03954.14 ORF56713 - 1.7 8.4 10.8 0.038 13.7 1.1 3.1 3 1 0 3 3 3 0 Hepatic lectin, N-terminal domain Baculo_PEP_C PF04513.12 ORF56713 - 1.8 8.6 22.9 2 8.4 0.9 4.5 4 1 0 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus G-gamma PF00631.22 ORF56713 - 4.5 7.3 6.9 0.64 10.1 0.1 3.2 4 0 0 4 4 4 0 GGL domain Col_cuticle_N PF01484.17 ORF56713 - 5 7.3 7.1 29 4.8 0.0 4.1 3 1 1 4 4 4 0 Nematode cuticle collagen N-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks5.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks5.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks5.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks5.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Peptidase_C1 PF00112.23 ORF43599 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF43599 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF43599 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family Peptidase_C1 PF00112.23 ORF4220 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF4220 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF4220 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family Hamartin PF04388.12 ORF37548 - 5.7 5.5 10.6 7.9 5.0 10.6 1.1 1 0 0 1 1 1 0 Hamartin protein T2SSK PF03934.13 ORF34966 - 0.095 12.1 0.2 0.15 11.4 0.2 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein K MFS_1 PF07690.16 ORF34832 - 2.7e-15 56.2 13.7 1.8e-14 53.5 7.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF34832 - 1.2e-07 30.9 3.4 1.2e-07 30.9 3.4 2.3 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.6 ORF34832 - 0.0003 19.5 7.0 0.00052 18.7 7.0 1.4 1 0 0 1 1 1 1 MFS/sugar transport protein PUCC PF03209.15 ORF34832 - 0.037 13.0 7.0 0.056 12.4 7.0 1.3 1 0 0 1 1 1 0 PUCC protein DUF1275 PF06912.11 ORF34832 - 0.061 13.2 5.2 0.16 11.9 5.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1275) Chorion_S16 PF05836.12 ORF34271 - 4.6 7.5 6.0 22 5.3 0.7 2.2 1 1 1 2 2 2 0 Chorion protein S16 tRNA-synt_2 PF00152.20 ORF27827 - 8.2e-73 245.2 0.1 9.4e-73 245.0 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 ORF27827 - 2.7e-05 23.8 0.2 0.16 11.5 0.1 2.6 2 1 1 3 3 3 2 tRNA synthetases class II core domain (F) ABC_tran PF00005.27 ORF25291 - 4.9e-30 104.8 0.0 7.6e-30 104.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF25291 - 4.1e-07 30.1 0.3 0.013 15.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 ORF25291 - 0.00014 22.3 0.1 0.00032 21.1 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain CBS PF00571.28 ORF25291 - 0.0006 20.2 0.1 0.004 17.6 0.0 2.4 3 0 0 3 3 2 1 CBS domain AAA_15 PF13175.6 ORF25291 - 0.00067 19.5 0.0 0.00091 19.0 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF25291 - 0.00076 19.2 0.0 0.0016 18.2 0.0 1.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF25291 - 0.0032 17.4 0.1 0.0057 16.6 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 ORF25291 - 0.0036 17.6 0.1 0.0098 16.2 0.0 1.8 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 ORF25291 - 0.0038 16.9 0.1 0.0075 16.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.12 ORF25291 - 0.0063 15.8 0.0 0.012 14.9 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin G-alpha PF00503.20 ORF25291 - 0.013 14.7 0.0 0.016 14.4 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit SMC_N PF02463.19 ORF25291 - 0.017 14.6 0.1 0.96 8.8 0.1 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_28 PF13521.6 ORF25291 - 0.074 13.3 0.2 0.32 11.2 0.0 2.1 3 0 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 ORF25291 - 0.16 11.8 0.0 0.77 9.6 0.0 1.9 2 0 0 2 2 2 0 NTPase DUF87 PF01935.17 ORF25291 - 0.21 11.6 0.1 0.39 10.8 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain UbiA PF01040.18 ORF25144 - 4e-38 131.2 17.6 4e-38 131.2 17.6 1.5 1 1 1 2 2 2 1 UbiA prenyltransferase family zf-CCCH PF00642.24 ORF148521 - 6.1e-19 67.4 14.3 2.6e-11 43.1 1.1 2.8 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF148521 - 1.2e-10 41.1 23.5 1.1e-06 28.5 2.2 3.2 4 0 0 4 4 4 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF148521 - 1.3e-06 28.0 12.9 0.008 16.0 0.5 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF148521 - 0.039 14.7 2.1 0.039 14.7 2.1 2.9 2 2 1 3 3 3 0 Torus domain zf-CCCH_2 PF14608.6 ORF148521 - 0.11 13.0 0.6 0.11 13.0 0.6 2.8 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Lustrin_cystein PF14625.6 ORF148521 - 1.8 9.0 6.2 0.76 10.2 1.0 2.6 1 1 1 2 2 2 0 Lustrin, cysteine-rich repeated domain adh_short PF00106.25 ORF143480 - 4.8e-30 104.5 0.2 6.4e-30 104.1 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF143480 - 1.7e-19 70.4 0.0 2.2e-19 69.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF143480 - 1.1e-05 25.4 0.0 1.8e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 ORF143480 - 0.00022 20.9 0.1 0.0075 15.9 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 ORF143480 - 0.00054 19.6 0.3 0.00078 19.1 0.3 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GxDLY PF14607.6 ORF143480 - 0.0081 16.0 0.3 0.018 14.8 0.0 1.7 2 0 0 2 2 2 1 N-terminus of Esterase_SGNH_hydro-type NleF_casp_inhib PF16809.5 ORF143480 - 0.015 15.2 0.6 0.022 14.7 0.6 1.2 1 0 0 1 1 1 0 NleF caspase inhibitor 3HCDH_N PF02737.18 ORF143480 - 0.057 13.3 0.1 0.093 12.6 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF143480 - 0.061 13.3 0.1 0.14 12.2 0.1 1.5 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF143480 - 0.085 12.2 0.1 8.9 5.6 0.0 2.1 1 1 1 2 2 2 0 ThiF family Lipase_3 PF01764.25 ORF143022 - 8.5e-28 97.0 0.0 1.6e-27 96.1 0.0 1.5 1 0 0 1 1 1 1 Lipase (class 3) Esterase PF00756.20 ORF143022 - 0.011 15.4 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 Putative esterase DUF5528 PF17666.1 ORF143022 - 0.14 12.1 0.1 0.26 11.2 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5528) Glyco_hydro_8 PF01270.17 ORF13904 - 1e-118 396.1 1.6 1.2e-118 395.9 1.6 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 8 DUF3788 PF12663.7 ORF13904 - 0.12 12.4 0.1 0.24 11.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3788) DUF1943 PF09172.11 ORF13887 - 0.097 11.9 1.5 0.19 11.0 1.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Ehrlichia_rpt PF09528.10 ORF136857 - 0.11 11.9 4.4 0.24 10.9 4.4 1.5 1 0 0 1 1 1 0 Ehrlichia tandem repeat (Ehrlichia_rpt) HCBP_related PF06594.11 ORF136857 - 0.24 11.4 1.9 29 4.7 0.0 3.1 2 1 0 2 2 2 0 Haemolysin-type calcium binding protein related domain DUF4073 PF13285.6 ORF136857 - 0.25 11.0 2.8 0.87 9.2 0.1 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4073) DUF5401 PF17380.2 ORF136857 - 1.9 6.5 8.8 2.4 6.1 8.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Peptidase_C54 PF03416.19 ORF135325 - 7.4e-64 215.8 0.9 8.6e-64 215.6 0.9 1.0 1 0 0 1 1 1 1 Peptidase family C54 Peptidase_C78 PF07910.13 ORF135325 - 0.091 12.2 0.8 0.17 11.4 0.8 1.4 1 1 0 1 1 1 0 Peptidase family C78 SlyX PF04102.12 ORF131812 - 0.05 14.2 0.1 0.17 12.6 0.1 2.0 1 0 0 1 1 1 0 SlyX Rpr2 PF04032.16 ORF131812 - 0.19 12.0 2.4 0.32 11.3 0.2 2.3 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain S1-P1_nuclease PF02265.16 ORF131372 - 3e-51 174.7 1.0 3.4e-51 174.5 1.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease adh_short PF00106.25 ORF131253 - 7e-30 103.9 0.2 9.4e-30 103.5 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF131253 - 4.5e-20 72.2 0.0 6e-20 71.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF131253 - 3.6e-06 27.0 0.0 5.9e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF131253 - 0.00023 20.8 0.3 0.00033 20.3 0.3 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF131253 - 0.00086 19.0 0.1 0.03 13.9 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NleF_casp_inhib PF16809.5 ORF131253 - 0.0053 16.7 1.2 0.0077 16.2 1.2 1.2 1 0 0 1 1 1 1 NleF caspase inhibitor GxDLY PF14607.6 ORF131253 - 0.016 15.0 0.4 0.035 13.9 0.0 1.7 2 0 0 2 2 2 0 N-terminus of Esterase_SGNH_hydro-type 3HCDH_N PF02737.18 ORF131253 - 0.022 14.6 0.1 0.036 13.9 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ThiF PF00899.21 ORF131253 - 0.037 13.4 0.1 7.7 5.8 0.0 2.1 1 1 1 2 2 2 0 ThiF family NAD_Gly3P_dh_N PF01210.23 ORF131253 - 0.049 13.6 0.1 0.099 12.6 0.1 1.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LytR_C PF13399.6 ORF131253 - 0.15 13.1 0.0 0.27 12.2 0.0 1.5 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator Methyltransf_10 PF05971.12 ORF126470 - 3.5e-154 512.5 0.0 4.1e-154 512.3 0.0 1.0 1 0 0 1 1 1 1 RNA methyltransferase MTS PF05175.14 ORF126470 - 5.3e-05 22.8 0.0 0.00014 21.5 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 ORF126470 - 0.017 15.0 0.0 0.034 14.0 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain TetR_C_31 PF17940.1 ORF126470 - 0.16 12.2 0.1 0.4 10.9 0.1 1.7 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain adh_short PF00106.25 ORF123102 - 3.5e-30 104.9 0.2 4.7e-30 104.5 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF123102 - 4.9e-20 72.1 0.0 6.5e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF123102 - 3.2e-06 27.2 0.0 5.2e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF123102 - 0.00019 21.1 0.3 0.00027 20.6 0.3 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF123102 - 0.00052 19.7 0.1 0.018 14.7 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA NleF_casp_inhib PF16809.5 ORF123102 - 0.0037 17.2 1.1 0.0053 16.7 1.1 1.2 1 0 0 1 1 1 1 NleF caspase inhibitor GxDLY PF14607.6 ORF123102 - 0.012 15.4 0.4 0.027 14.3 0.0 1.7 2 0 0 2 2 2 0 N-terminus of Esterase_SGNH_hydro-type 3HCDH_N PF02737.18 ORF123102 - 0.019 14.9 0.1 0.03 14.2 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 ORF123102 - 0.051 13.6 0.1 0.11 12.4 0.1 1.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 ORF123102 - 0.056 12.8 0.1 5.8 6.2 0.0 2.1 1 1 1 2 2 2 0 ThiF family Sacchrp_dh_NADP PF03435.18 ORF123102 - 0.1 12.9 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain LysR_substrate PF03466.20 ORF12072 - 1.5e-20 73.5 0.1 2.1e-20 73.0 0.1 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF12072 - 6.3e-20 70.9 0.7 1.5e-19 69.7 0.7 1.7 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 ORF12072 - 0.00015 21.5 0.2 0.00037 20.2 0.2 1.7 1 1 0 1 1 1 1 PucR C-terminal helix-turn-helix domain CRIC_ras_sig PF10534.9 ORF12072 - 0.059 13.5 0.3 4.9 7.4 0.0 2.3 1 1 0 2 2 2 0 Connector enhancer of kinase suppressor of ras Peptidase_C1 PF00112.23 ORF117291 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF117291 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF117291 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family Aa_trans PF01490.18 ORF116299 - 2.3e-18 66.1 5.4 2.3e-18 66.1 5.4 2.2 2 1 0 2 2 2 1 Transmembrane amino acid transporter protein AAA PF00004.29 ORF115638 - 3.7e-05 24.2 0.2 0.00038 20.9 0.0 2.6 1 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Peptidase_S46 PF10459.9 ORF115638 - 0.048 12.3 1.4 0.077 11.6 1.4 1.3 1 0 0 1 1 1 0 Peptidase S46 Peptidase_C1 PF00112.23 ORF114195 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF114195 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF114195 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family Metallophos PF00149.28 ORF110286 - 7.4e-36 124.6 0.4 1e-35 124.1 0.4 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF110286 - 8.2e-12 45.4 0.1 1.6e-11 44.5 0.1 1.5 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain S1-P1_nuclease PF02265.16 ORF107900 - 3e-51 174.7 1.0 3.4e-51 174.5 1.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Peptidase_C1 PF00112.23 ORF102485 - 6e-59 199.8 10.9 7.3e-59 199.5 10.9 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF102485 - 0.0055 16.6 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF102485 - 0.046 12.5 3.6 2 7.1 1.4 2.1 2 0 0 2 2 2 0 Peptidase C1-like family PTEN_C2 PF10409.9 ORF101486 - 1.1e-11 44.6 6.0 8.6e-10 38.5 6.0 2.2 1 1 0 1 1 1 1 C2 domain of PTEN tumour-suppressor protein DSPc PF00782.20 ORF101486 - 4.9e-05 23.2 0.3 0.00023 21.0 0.0 2.2 3 0 0 3 3 3 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 ORF101486 - 0.00025 21.1 1.2 0.00046 20.2 0.1 1.8 2 0 0 2 2 2 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 ORF101486 - 0.0078 15.8 0.1 0.019 14.5 0.1 1.6 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DUF3984 PF13136.6 ORF101486 - 0.095 12.1 1.2 0.13 11.7 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3984) PTPlike_phytase PF14566.6 ORF101486 - 0.15 12.2 1.3 0.26 11.4 0.1 2.0 2 0 0 2 2 2 0 Inositol hexakisphosphate DUF924 PF06041.11 NODE_22087_length_919_cov_144.180995_g17051_i0reverse_frame_1 - 2.6e-40 138.5 0.0 3.4e-40 138.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) INCENP_ARK-bind PF03941.15 NODE_22087_length_919_cov_144.180995_g17051_i0reverse_frame_1 - 0.025 14.5 0.4 4.2 7.4 0.1 2.4 2 0 0 2 2 2 0 Inner centromere protein, ARK binding region Band_7 PF01145.25 ORF9181 - 5.8e-15 55.7 0.0 9.4e-15 55.1 0.0 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family DUF3149 PF11346.8 ORF9181 - 1.7 8.3 5.0 3.2 7.4 5.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) HSP70 PF00012.20 ORF91008 - 8.1e-63 212.6 0.0 9.8e-63 212.3 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF91008 - 1.9e-16 59.8 0.1 5.1e-16 58.4 0.1 1.6 1 1 0 1 1 1 1 MreB/Mbl protein StbA PF06406.11 ORF91008 - 0.00038 19.8 0.1 0.001 18.4 0.0 1.6 1 1 1 2 2 2 1 StbA protein AIRS_C PF02769.22 ORF88628 - 4.1e-40 137.4 0.0 6.3e-40 136.8 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF88628 - 1.3e-15 57.8 0.3 2.4e-15 57.0 0.3 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Phage_int_SAM_5 PF13102.6 ORF87292 - 0.012 16.0 0.0 0.055 13.8 0.0 2.1 3 0 0 3 3 3 0 Phage integrase SAM-like domain DUF4404 PF14357.6 ORF87292 - 0.11 13.1 1.4 0.25 12.0 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) NatB_MDM20 PF09797.9 ORF87292 - 0.12 11.3 0.2 0.16 10.9 0.2 1.2 1 0 0 1 1 1 0 N-acetyltransferase B complex (NatB) non catalytic subunit Tape_meas_lam_C PF09718.10 ORF87292 - 0.12 12.5 1.2 7.6 6.7 0.5 2.7 2 1 0 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) Spore_YhcN_YlaJ PF09580.10 ORF87292 - 2 8.5 3.9 0.55 10.3 0.7 1.7 2 0 0 2 2 2 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) Spore_III_AF PF09581.10 ORF87292 - 4.2 7.3 7.8 5.6 6.9 7.0 1.6 1 1 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) S1-P1_nuclease PF02265.16 ORF87000 - 1.1e-51 176.1 0.4 1.4e-51 175.8 0.4 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Pkinase PF00069.25 ORF86279 - 4.9e-61 206.4 0.1 6.4e-61 206.0 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86279 - 2.2e-33 115.6 0.0 2.9e-33 115.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF86279 - 1.1e-07 31.4 0.0 1.7e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF86279 - 0.0001 21.3 0.0 0.00016 20.6 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF86279 - 0.007 15.3 0.2 0.013 14.5 0.2 1.4 1 0 0 1 1 1 1 Haspin like kinase domain Importin_rep_3 PF18806.1 ORF83020 - 0.07 13.2 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Importin 13 repeat S1-P1_nuclease PF02265.16 ORF79998 - 1.1e-51 176.1 0.4 1.4e-51 175.8 0.4 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease adh_short PF00106.25 ORF78379 - 8.6e-29 100.4 0.1 1e-28 100.1 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF78379 - 8e-16 58.3 0.0 1.1e-15 57.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF78379 - 0.0037 17.2 0.1 0.012 15.6 0.1 1.8 1 1 0 1 1 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF78379 - 0.026 14.1 0.2 0.026 14.1 0.2 1.5 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MFS_1 PF07690.16 ORF75168 - 6.9e-06 25.2 0.5 6.9e-06 25.2 0.5 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF75168 - 7.3e-05 21.8 13.7 0.00066 18.7 13.7 1.9 1 1 0 1 1 1 1 Sugar (and other) transporter CarboxypepD_reg PF13620.6 ORF71811 - 8.7e-15 54.8 0.5 1.4e-07 31.7 0.1 2.9 3 0 0 3 3 3 2 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 ORF71811 - 7.4e-07 29.1 0.3 0.04 13.9 0.0 2.7 2 0 0 2 2 2 2 CarboxypepD_reg-like domain SdrD_B PF17210.3 ORF71811 - 1.4e-06 28.5 0.2 0.0036 17.5 0.0 2.5 2 0 0 2 2 2 2 SdrD B-like domain SpaA PF17802.1 ORF71811 - 9.8e-05 22.6 0.2 0.37 11.1 0.0 2.6 2 0 0 2 2 2 2 Prealbumin-like fold domain MG4 PF17789.1 ORF71811 - 0.0002 21.4 0.2 0.17 12.1 0.0 2.7 2 1 1 3 3 3 2 Macroglobulin domain MG4 bMG3 PF11974.8 ORF71811 - 0.0002 21.3 0.0 0.011 15.8 0.0 2.3 2 0 0 2 2 2 1 Bacterial alpha-2-macroglobulin MG3 domain DUF2012 PF09430.10 ORF71811 - 0.0012 18.9 0.3 0.02 15.0 0.1 2.6 2 1 1 3 3 3 1 Protein of unknown function (DUF2012) Big_1 PF02369.16 ORF71811 - 0.008 16.2 0.6 4.4 7.4 0.2 2.4 2 0 0 2 2 2 2 Bacterial Ig-like domain (group 1) MucBP_2 PF17965.1 ORF71811 - 0.013 16.1 1.8 0.14 12.8 0.1 2.7 3 0 0 3 3 3 0 Mucin binding domain fn3 PF00041.21 ORF71811 - 0.03 14.7 0.1 0.081 13.3 0.1 1.7 1 0 0 1 1 1 0 Fibronectin type III domain HARP PF07443.13 ORF69875 - 0.011 15.4 0.1 0.03 14.0 0.1 1.7 1 0 0 1 1 1 0 HepA-related protein (HARP) FAD_binding_7 PF03441.14 ORF69057 - 3.5e-42 144.2 0.2 4.7e-42 143.8 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase KH_dom-like PF14714.6 ORF56956 - 0.067 13.5 0.2 0.13 12.6 0.2 1.5 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FAM180 PF15173.6 ORF56808 - 0.0064 16.5 0.3 0.013 15.5 0.1 1.5 1 1 0 1 1 1 1 FAM180 family G-7-MTase PF12803.7 ORF56808 - 0.03 13.5 0.2 0.038 13.2 0.2 1.2 1 0 0 1 1 1 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) RFX1_trans_act PF04589.13 ORF56808 - 0.2 11.9 0.4 18 5.5 0.5 2.4 2 0 0 2 2 2 0 RFX1 transcription activation region Gluconate_2-dh3 PF13618.6 ORF56808 - 0.2 11.9 1.2 0.31 11.3 1.2 1.3 1 0 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 Pkinase PF00069.25 ORF53546 - 4.7e-73 245.8 0.0 5.3e-73 245.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF53546 - 1.6e-30 106.2 0.0 2e-30 105.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF53546 - 5.5e-06 25.9 0.0 0.00012 21.5 0.0 2.3 2 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF53546 - 5.7e-05 22.2 1.2 0.00051 19.1 1.2 2.0 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF53546 - 0.0072 15.7 0.1 0.014 14.8 0.1 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF53546 - 0.015 15.2 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF53546 - 0.042 12.9 0.8 0.13 11.3 0.1 1.8 1 1 1 2 2 2 0 Seadornavirus VP7 FTA2 PF13095.6 ORF53546 - 0.095 12.3 0.1 8 6.0 0.0 2.2 1 1 1 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 DUF1451 PF07295.11 ORF53546 - 0.11 12.6 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Zinc-ribbon containing domain Pkinase_fungal PF17667.1 ORF53546 - 0.14 10.9 0.0 0.22 10.2 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase HpcH_HpaI PF03328.14 ORF51901 - 7.9e-84 280.2 0.3 2.2e-83 278.8 0.1 1.7 2 0 0 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 ORF51901 - 7.2e-10 38.5 0.1 2.8e-07 30.0 0.0 2.4 3 0 0 3 3 3 2 C-C_Bond_Lyase of the TIM-Barrel fold Ribosomal_L5_C PF00673.21 ORF50404 - 9.9e-17 60.9 0.0 1.7e-16 60.2 0.0 1.4 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Phage_int_SAM_5 PF13102.6 ORF47194 - 0.065 13.6 2.4 0.16 12.3 1.2 2.3 2 1 0 2 2 2 0 Phage integrase SAM-like domain DegT_DnrJ_EryC1 PF01041.17 ORF38371 - 3.4e-75 253.6 0.0 3.8e-75 253.4 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family CDC50 PF03381.15 ORF36792 - 2e-33 116.2 0.3 2.6e-33 115.7 0.3 1.1 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family PC-Esterase PF13839.6 ORF25576 - 0.0047 16.7 0.0 0.0069 16.2 0.0 1.2 1 0 0 1 1 1 1 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Enkurin PF13864.6 ORF23225 - 4.7e-25 87.9 9.2 8.7e-25 87.0 9.2 1.5 1 0 0 1 1 1 1 Calmodulin-binding ABC_tran_CTD PF16326.5 ORF23225 - 0.0024 18.1 0.7 0.0024 18.1 0.7 2.6 2 0 0 2 2 2 1 ABC transporter C-terminal domain DUF4355 PF14265.6 ORF23225 - 0.0071 16.6 7.6 1 9.6 0.2 2.6 2 0 0 2 2 2 2 Domain of unknown function (DUF4355) GPS2_interact PF15784.5 ORF23225 - 0.043 14.2 9.7 0.12 12.8 0.1 2.9 3 0 0 3 3 3 0 G-protein pathway suppressor 2-interacting domain RRF PF01765.19 ORF23225 - 0.11 12.5 3.6 0.18 11.7 3.3 1.5 1 1 0 1 1 1 0 Ribosome recycling factor LsmAD PF06741.13 ORF23225 - 0.14 12.7 0.3 0.14 12.7 0.3 2.3 2 0 0 2 2 2 0 LsmAD domain FlxA PF14282.6 ORF23225 - 1.3 9.1 7.5 4.2 7.4 3.2 2.3 2 0 0 2 2 2 0 FlxA-like protein Ldh_1_C PF02866.18 ORF22034 - 2.6e-40 138.1 0.0 3.6e-40 137.6 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 ORF22034 - 1.3e-25 90.2 0.0 2e-25 89.5 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain RCC1_2 PF13540.6 ORF17301 - 2.2e-17 62.4 27.0 0.0054 16.5 0.5 7.5 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat Cerato-platanin PF07249.12 ORF17301 - 0.033 14.3 7.6 0.73 10.0 0.4 3.8 2 2 2 4 4 4 0 Cerato-platanin S1-P1_nuclease PF02265.16 ORF15395 - 1.1e-51 176.1 0.4 1.4e-51 175.8 0.4 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease ABC_tran PF00005.27 ORF150647 - 7.5e-28 97.8 0.0 1.4e-27 96.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF150647 - 6.6e-08 32.3 2.6 6.3e-06 25.8 1.2 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF150647 - 0.00072 19.6 0.6 0.0025 17.9 0.6 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA PF00004.29 ORF150647 - 0.0017 18.8 1.8 0.1 13.0 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 ORF150647 - 0.0083 15.1 0.0 0.012 14.6 0.0 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_21 PF13304.6 ORF150647 - 0.0095 15.8 0.2 2.5 7.8 0.0 2.2 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 ORF150647 - 0.021 14.6 0.0 0.045 13.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF87 PF01935.17 ORF150647 - 0.023 14.8 0.3 0.065 13.3 0.0 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain DUF815 PF05673.13 ORF150647 - 0.027 13.6 0.0 0.057 12.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) NB-ARC PF00931.22 ORF150647 - 0.029 13.6 2.2 0.075 12.2 2.1 1.7 1 1 0 1 1 1 0 NB-ARC domain AAA_5 PF07728.14 ORF150647 - 0.031 14.3 0.3 8.6 6.4 0.0 2.8 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 ORF150647 - 0.044 13.5 0.2 2 8.1 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein RNA_helicase PF00910.22 ORF150647 - 0.05 14.0 0.2 1.2 9.6 0.0 2.5 2 0 0 2 2 2 0 RNA helicase AAA_23 PF13476.6 ORF150647 - 0.068 13.7 1.7 0.16 12.5 1.6 1.8 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 ORF150647 - 0.075 12.9 1.1 0.21 11.5 0.1 2.0 2 0 0 2 2 2 0 NTPase ATP_bind_1 PF03029.17 ORF150647 - 0.084 12.6 0.3 0.4 10.4 0.0 2.0 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF150647 - 0.089 13.1 0.2 0.22 11.8 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF150647 - 0.1 12.3 1.4 0.15 11.8 1.2 1.4 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF150647 - 0.12 13.0 0.1 0.33 11.5 0.1 1.7 1 1 0 1 1 1 0 AAA domain CbiA PF01656.23 ORF150647 - 0.18 11.9 0.1 0.35 10.9 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain S1-P1_nuclease PF02265.16 ORF150477 - 1.1e-51 176.1 0.4 1.4e-51 175.8 0.4 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease TPR_19 PF14559.6 ORF139469 - 2.1e-06 28.1 1.8 5.8e-06 26.7 1.8 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF139469 - 0.002 17.8 0.0 0.43 10.5 0.1 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF139469 - 0.0024 17.8 1.4 1.6 9.0 0.1 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF139469 - 0.0031 17.7 0.3 0.0084 16.3 0.0 1.8 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF139469 - 0.008 16.9 0.2 0.008 16.9 0.2 3.9 3 1 1 4 4 4 2 Tetratricopeptide repeat PNP_UDP_1 PF01048.20 ORF139469 - 0.014 14.7 0.0 0.067 12.4 0.0 2.0 2 0 0 2 2 2 0 Phosphorylase superfamily TPR_12 PF13424.6 ORF139469 - 0.015 15.5 0.8 0.055 13.8 0.4 2.2 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF139469 - 0.096 12.4 0.0 1.1 9.0 0.0 2.4 2 0 0 2 2 2 0 TPR repeat TPR_16 PF13432.6 ORF139469 - 0.32 11.7 0.2 0.32 11.7 0.2 3.4 3 1 1 4 4 4 0 Tetratricopeptide repeat Lipase_3 PF01764.25 ORF139444 - 9e-28 96.9 0.0 1.4e-27 96.3 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Peptidase_S9 PF00326.21 ORF139444 - 0.00061 19.3 0.0 0.00088 18.8 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family PGAP1 PF07819.13 ORF139444 - 0.0053 16.5 0.0 0.0093 15.7 0.0 1.4 1 0 0 1 1 1 1 PGAP1-like protein Hydrolase_4 PF12146.8 ORF139444 - 0.036 13.3 0.0 0.056 12.7 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 PKI PF02827.16 ORF139444 - 0.2 11.9 0.0 0.35 11.1 0.0 1.3 1 0 0 1 1 1 0 cAMP-dependent protein kinase inhibitor Cyt-b5 PF00173.28 ORF13943 - 1.6e-08 34.6 0.0 3.2e-08 33.6 0.0 1.6 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ank_2 PF12796.7 ORF136271 - 5.7e-18 65.3 0.0 1.8e-09 38.1 0.0 3.1 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF136271 - 6.4e-17 59.9 0.4 0.0074 16.7 0.0 5.4 5 0 0 5 5 5 3 Ankyrin repeat Ank_4 PF13637.6 ORF136271 - 6.6e-16 58.5 0.9 0.0013 19.3 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF136271 - 6.1e-14 51.9 2.5 0.0012 19.1 0.0 5.1 3 2 2 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF136271 - 1.8e-13 50.3 3.1 0.00031 21.0 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat ubiquitin PF00240.23 ORF136271 - 0.0049 16.6 0.0 0.0086 15.8 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family FAD_binding_7 PF03441.14 ORF136139 - 3.5e-42 144.2 0.2 4.7e-42 143.8 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase START PF01852.19 ORF134535 - 5.9e-06 25.8 0.0 1.1e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 START domain Rieske_3 PF18465.1 ORF134535 - 0.61 10.4 3.2 0.56 10.5 0.5 2.2 2 1 0 2 2 2 0 Rieske 3Fe-4S EF-hand_7 PF13499.6 ORF134034 - 4.5e-23 81.5 7.8 1.6e-07 31.7 0.3 5.6 3 2 1 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF134034 - 5.8e-23 78.8 5.2 0.0047 16.8 0.0 7.2 7 0 0 7 7 7 7 EF-hand domain EF-hand_1 PF00036.32 ORF134034 - 1.8e-21 74.0 6.2 0.03 13.9 0.0 7.2 7 0 0 7 7 7 7 EF hand EF-hand_8 PF13833.6 ORF134034 - 5.1e-14 51.9 7.7 1.9e-05 24.4 0.2 6.0 5 1 1 6 6 6 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF134034 - 2.8e-05 23.4 4.5 1.6 8.3 0.0 5.8 6 0 0 6 6 6 2 EF hand SPARC_Ca_bdg PF10591.9 ORF134034 - 6.4e-05 23.2 2.4 0.095 13.0 0.1 3.8 2 2 2 4 4 4 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF134034 - 0.0022 17.9 3.2 0.31 11.0 0.0 4.1 4 1 1 5 5 5 1 Cytoskeletal-regulatory complex EF hand Glyco_hydro_39 PF01229.17 ORF134034 - 0.051 12.2 0.0 0.11 11.1 0.0 1.5 1 1 0 1 1 1 0 Glycosyl hydrolases family 39 PAP1 PF08601.10 ORF134034 - 0.21 11.3 0.1 0.31 10.7 0.1 1.1 1 0 0 1 1 1 0 Transcription factor PAP1 GcpE PF04551.14 ORF132654 - 8.6e-108 360.5 0.0 9.8e-108 360.4 0.0 1.0 1 0 0 1 1 1 1 GcpE protein PDZ_3 PF17815.1 ORF127772 - 8.4e-25 87.3 0.0 1.3e-24 86.7 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 ORF127772 - 0.099 13.0 0.0 0.39 11.1 0.0 2.0 2 1 0 2 2 2 0 PDZ domain Hydrolase_4 PF12146.8 ORF125128 - 7.8e-12 45.0 0.0 9.5e-08 31.6 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF125128 - 3.9e-11 43.1 0.0 6.2e-08 32.6 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 ORF125128 - 1.3e-07 31.7 0.0 0.0003 20.7 0.0 2.9 2 1 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF125128 - 6.6e-05 23.6 0.0 0.00012 22.7 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family FSH1 PF03959.13 ORF125128 - 0.00016 21.4 0.0 0.00032 20.4 0.0 1.5 1 1 0 1 1 1 1 Serine hydrolase (FSH1) DLH PF01738.18 ORF125128 - 0.00039 20.0 0.0 0.0056 16.2 0.0 2.4 2 1 0 2 2 2 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF125128 - 0.0024 17.4 0.2 0.024 14.1 0.1 2.1 1 1 0 1 1 1 1 Prolyl oligopeptidase family BAAT_C PF08840.11 ORF125128 - 0.0087 16.0 0.0 0.2 11.5 0.0 2.2 1 1 0 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Tannase PF07519.11 ORF125128 - 0.019 13.9 0.1 1.1 8.1 0.0 2.1 2 0 0 2 2 2 0 Tannase and feruloyl esterase AXE1 PF05448.12 ORF125128 - 0.038 12.7 0.0 0.081 11.6 0.0 1.5 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) Esterase PF00756.20 ORF125128 - 0.055 13.1 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 Putative esterase PhoPQ_related PF10142.9 ORF125128 - 0.061 12.0 0.1 0.086 11.5 0.1 1.2 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein Abhydrolase_3 PF07859.13 ORF125128 - 0.083 12.7 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF2974 PF11187.8 ORF125128 - 0.14 11.7 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) PAF-AH_p_II PF03403.13 ORF125128 - 0.15 10.6 0.0 0.23 10.0 0.0 1.2 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II Palm_thioest PF02089.15 ORF120065 - 3.5e-46 158.0 0.1 4e-46 157.8 0.1 1.1 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF120065 - 0.00016 21.3 0.0 0.00026 20.6 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 ORF120065 - 0.00027 20.7 0.0 0.00054 19.8 0.0 1.5 1 1 0 1 1 1 1 PGAP1-like protein TRIF-NTD PF17798.1 ORF120065 - 0.0062 16.7 0.0 0.0097 16.0 0.0 1.2 1 0 0 1 1 1 1 TRIF N-terminal domain Abhydrolase_1 PF00561.20 ORF120065 - 0.0063 16.2 0.0 0.011 15.4 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold RE_CfrBI PF09516.10 ORF120065 - 0.015 14.7 0.1 0.026 13.9 0.1 1.3 1 0 0 1 1 1 0 CfrBI restriction endonuclease 2OG-FeII_Oxy_3 PF13640.6 ORF116914 - 0.0016 19.3 0.0 0.0037 18.1 0.0 1.6 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily PQ-loop PF04193.14 ORF114859 - 8.7e-31 105.5 21.3 2.7e-16 59.1 6.7 3.5 3 0 0 3 3 3 2 PQ loop repeat MMM1 PF10296.9 ORF114859 - 0.097 11.7 0.2 0.17 10.9 0.2 1.3 1 0 0 1 1 1 0 Maintenance of mitochondrial morphology protein 1 Palm_thioest PF02089.15 ORF113627 - 3.5e-46 158.0 0.1 4e-46 157.8 0.1 1.1 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF113627 - 0.00016 21.3 0.0 0.00026 20.6 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) PGAP1 PF07819.13 ORF113627 - 0.00027 20.7 0.0 0.00054 19.8 0.0 1.5 1 1 0 1 1 1 1 PGAP1-like protein TRIF-NTD PF17798.1 ORF113627 - 0.0062 16.7 0.0 0.0097 16.0 0.0 1.2 1 0 0 1 1 1 1 TRIF N-terminal domain Abhydrolase_1 PF00561.20 ORF113627 - 0.0063 16.2 0.0 0.011 15.4 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold RE_CfrBI PF09516.10 ORF113627 - 0.015 14.7 0.1 0.026 13.9 0.1 1.3 1 0 0 1 1 1 0 CfrBI restriction endonuclease Treacle PF03546.14 ORF105772 - 0.17 10.6 4.5 0.27 10.0 0.5 2.1 2 0 0 2 2 2 0 Treacher Collins syndrome protein Treacle TraB PF01963.17 ORF101629 - 0.0083 16.1 0.1 0.016 15.1 0.1 1.4 1 0 0 1 1 1 1 TraB family DUF1636 PF07845.11 NODE_22058_length_920_cov_610.299435_g17026_i0reverse_frame_2 - 0.018 15.5 0.3 0.018 15.5 0.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1636) HSP9_HSP12 PF04119.12 NODE_22058_length_920_cov_610.299435_g17026_i0forward_frame_3 - 0.15 12.5 0.1 0.39 11.1 0.1 1.7 1 0 0 1 1 1 0 Heat shock protein 9/12 DUF1152 PF06626.12 NODE_22024_length_921_cov_386.292325_g17001_i0forward_frame_2 - 0.2 10.8 0.0 0.26 10.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1152) Metallophos PF00149.28 ORF96535 - 2.6e-40 139.1 0.1 3.3e-40 138.8 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF96535 - 8.2e-05 23.0 0.2 0.00018 21.9 0.2 1.5 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Metallophos_2 PF12850.7 ORF96535 - 0.11 12.6 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain ABC2_membrane_3 PF12698.7 ORF93029 - 7.6e-21 74.6 9.1 9e-21 74.4 9.1 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein Sigma_reg_N PF13800.6 ORF93029 - 2.7 8.3 5.8 24 5.3 0.1 3.2 3 0 0 3 3 3 0 Sigma factor regulator N-terminal DUF935 PF06074.12 ORF88256 - 0.18 10.5 0.6 0.22 10.2 0.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF935) 2-oxoacid_dh PF00198.23 ORF87878 - 2e-22 79.8 0.0 2.2e-14 53.5 0.0 2.1 2 0 0 2 2 2 2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TEBP_beta PF07404.11 ORF85855 - 2.3 7.5 12.1 3.2 7.0 12.1 1.1 1 0 0 1 1 1 0 Telomere-binding protein beta subunit (TEBP beta) MSP1_C PF07462.11 ORF85855 - 5.3 5.6 6.3 7 5.2 6.3 1.1 1 0 0 1 1 1 0 Merozoite surface protein 1 (MSP1) C-terminus RRM_1 PF00076.22 ORF80644 - 0.0049 16.7 0.1 0.026 14.4 0.1 2.0 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF80644 - 0.028 14.5 0.0 0.048 13.8 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif Ureide_permease PF07168.11 ORF80547 - 5.2e-10 38.6 5.8 1e-06 27.8 0.1 2.1 2 0 0 2 2 2 2 Ureide permease Sugar_transport PF06800.12 ORF80547 - 0.0013 18.1 3.1 0.037 13.3 0.2 2.9 3 0 0 3 3 3 1 Sugar transport protein TMEM144 PF07857.12 ORF80547 - 0.03 13.3 0.3 0.03 13.3 0.3 2.0 2 0 0 2 2 2 0 Transmembrane family, TMEM144 of transporters COX1 PF00115.20 ORF80547 - 1.4 7.7 9.8 0.17 10.7 0.6 2.5 3 0 0 3 3 3 0 Cytochrome C and Quinol oxidase polypeptide I Metallophos PF00149.28 ORF7465 - 2.6e-40 139.1 0.1 3.3e-40 138.8 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF7465 - 8.2e-05 23.0 0.2 0.00018 21.9 0.2 1.5 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Metallophos_2 PF12850.7 ORF7465 - 0.11 12.6 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Bax1-I PF01027.20 ORF69785 - 3e-37 128.5 28.9 3.5e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF69785 - 1.8 9.3 17.3 2.6 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF69785 - 2.8 8.0 8.1 7 6.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) CMAS PF02353.20 ORF67534 - 3.1e-71 239.9 0.4 3.6e-71 239.7 0.4 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 ORF67534 - 1.8e-15 57.4 0.0 3.3e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF67534 - 9.4e-14 51.8 0.0 1.9e-13 50.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF67534 - 4.8e-11 42.8 0.1 8.9e-11 41.9 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF67534 - 7.9e-09 36.2 0.0 1.3e-08 35.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF67534 - 6.8e-08 32.4 0.0 9.3e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF67534 - 0.00039 20.0 0.0 0.00063 19.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 ORF67534 - 0.0023 17.7 0.0 0.0031 17.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.12 ORF67534 - 0.0031 17.1 0.0 0.0049 16.5 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_PK PF05891.12 ORF67534 - 0.0056 16.2 0.0 0.0083 15.7 0.0 1.2 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase TPMT PF05724.11 ORF67534 - 0.006 16.3 0.0 0.058 13.0 0.0 2.1 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_3 PF01596.17 ORF67534 - 0.016 14.4 0.0 0.037 13.2 0.0 1.5 1 1 0 1 1 1 0 O-methyltransferase RrnaAD PF00398.20 ORF67534 - 0.017 14.2 0.0 0.027 13.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase GCD14 PF08704.10 ORF67534 - 0.019 14.6 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_32 PF13679.6 ORF67534 - 0.041 13.9 0.0 0.08 12.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DOT1 PF08123.13 ORF67534 - 0.073 12.6 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 NodS PF05401.11 ORF67534 - 0.1 12.2 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_2 PF00891.18 ORF67534 - 0.14 11.5 0.0 0.35 10.1 0.0 1.7 1 1 0 1 1 1 0 O-methyltransferase domain FtsJ PF01728.19 ORF67534 - 0.17 12.0 0.0 0.34 11.0 0.0 1.6 1 1 0 1 1 1 0 FtsJ-like methyltransferase Pkinase PF00069.25 ORF66716 - 1e-59 202.1 0.2 1.4e-59 201.7 0.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF66716 - 8.6e-37 126.8 0.0 1.1e-36 126.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF66716 - 0.0003 20.2 0.0 0.0005 19.5 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF66716 - 0.0031 16.9 0.0 0.0062 15.9 0.0 1.6 1 1 1 2 2 2 1 Kinase-like 2-oxoacid_dh PF00198.23 ORF66637 - 2.2e-22 79.7 0.0 2.4e-14 53.3 0.0 2.1 2 0 0 2 2 2 2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FN3_7 PF18447.1 ORF63801 - 0.36 11.2 4.2 2.9 8.2 0.0 2.4 2 0 0 2 2 2 0 Fibronectin type III domain Enolase_C PF00113.22 ORF59955 - 2.2 7.5 6.4 0.3 10.3 1.9 1.8 2 0 0 2 2 2 0 Enolase, C-terminal TIM barrel domain VPS13 PF16908.5 ORF57186 - 8.1e-21 74.9 8.3 3.4e-20 72.9 8.3 1.9 1 1 0 1 1 1 1 Vacuolar sorting-associated protein 13, N-terminal CRAL_TRIO_N PF03765.15 ORF57186 - 0.27 11.5 2.8 14 5.9 0.0 3.3 3 0 0 3 3 3 0 CRAL/TRIO, N-terminal domain Pkinase PF00069.25 ORF55933 - 2.4e-49 168.1 0.1 3.5e-49 167.5 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF55933 - 8.1e-30 104.0 0.0 1.1e-29 103.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pox_ser-thr_kin PF05445.11 ORF55933 - 0.019 13.9 0.9 0.019 13.9 0.9 1.7 1 1 1 2 2 2 0 Poxvirus serine/threonine protein kinase DUF2517 PF10725.9 ORF55933 - 0.036 13.8 0.0 0.066 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2517) Kdo PF06293.14 ORF55933 - 0.047 13.1 0.1 0.096 12.0 0.1 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF55933 - 0.059 13.3 0.0 0.09 12.7 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF1972 PF09314.11 ORF55933 - 0.066 12.8 0.5 2 8.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1972) SPOR PF05036.13 ORF54493 - 5.7e-11 42.6 0.0 9.3e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 Sporulation related domain Chloroa_b-bind PF00504.21 ORF49744 - 1.8e-50 171.6 0.7 1.2e-28 100.6 0.0 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein BtrH_N PF14399.6 ORF49744 - 0.031 14.5 0.0 4.5 7.5 0.0 2.6 3 0 0 3 3 3 0 Butirosin biosynthesis protein H, N-terminal EF-hand_6 PF13405.6 ORF49410 - 3.2e-05 23.5 0.3 0.00014 21.5 0.3 2.2 1 1 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF49410 - 0.00035 19.9 0.2 0.0011 18.4 0.2 1.9 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF49410 - 0.0026 18.2 3.2 0.0036 17.7 0.2 2.2 2 0 0 2 2 2 1 EF-hand domain pair FAM176 PF14851.6 ORF49410 - 0.085 12.5 1.1 0.12 12.0 1.1 1.2 1 0 0 1 1 1 0 FAM176 family TIR_2 PF13676.6 ORF47229 - 0.068 13.8 0.0 0.23 12.1 0.0 1.9 1 1 0 1 1 1 0 TIR domain HET PF06985.11 ORF47229 - 0.096 13.0 0.3 0.37 11.1 0.2 2.0 2 0 0 2 2 2 0 Heterokaryon incompatibility protein (HET) Ldt_C PF17969.1 ORF44735 - 7.1e-24 84.3 0.2 1.5e-23 83.3 0.2 1.6 1 0 0 1 1 1 1 L,D-transpeptidase C-terminal domain YkuD PF03734.14 ORF44735 - 1.9e-17 64.0 0.0 3.4e-17 63.2 0.0 1.4 1 0 0 1 1 1 1 L,D-transpeptidase catalytic domain Pribosyltran PF00156.27 ORF42899 - 6.7e-15 54.9 0.0 9.7e-15 54.4 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 ORF42899 - 0.0033 16.9 0.0 0.0052 16.2 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Radical_SAM PF04055.21 ORF42899 - 0.006 17.0 0.8 0.11 12.9 0.8 2.4 1 1 0 1 1 1 1 Radical SAM superfamily Metallophos PF00149.28 ORF42642 - 4.4e-19 69.8 0.0 6.1e-19 69.3 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Bax1-I PF01027.20 ORF413 - 3e-37 128.5 28.9 3.5e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF413 - 1.8 9.3 17.3 2.6 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF413 - 2.8 8.0 8.1 7 6.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) AAA PF00004.29 ORF39691 - 4.2e-42 143.7 0.0 7.3e-42 142.9 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF39691 - 5.6e-13 48.5 0.1 3.3e-12 46.0 0.1 2.4 1 1 0 1 1 1 1 AAA+ lid domain Vps4_C PF09336.10 ORF39691 - 3.3e-10 39.8 0.7 9.6e-10 38.3 0.1 2.1 3 0 0 3 3 2 1 Vps4 C terminal oligomerisation domain AAA_2 PF07724.14 ORF39691 - 5e-08 33.2 0.0 9.7e-08 32.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF39691 - 9e-06 25.5 0.0 1.7e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 ORF39691 - 0.0001 22.3 1.5 0.0014 18.7 0.7 2.9 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) ATPase PF06745.13 ORF39691 - 0.00011 21.6 0.6 0.24 10.7 0.1 2.3 1 1 1 2 2 2 2 KaiC AAA_22 PF13401.6 ORF39691 - 0.00012 22.4 0.4 0.00072 19.8 0.3 2.3 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 ORF39691 - 0.00026 21.4 0.1 0.0019 18.6 0.0 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 ORF39691 - 0.00043 20.3 0.1 0.0019 18.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 ORF39691 - 0.00065 19.5 0.0 0.0013 18.5 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_24 PF13479.6 ORF39691 - 0.00085 19.1 0.0 0.0015 18.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 ORF39691 - 0.0014 18.0 0.1 0.0029 17.0 0.1 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 ORF39691 - 0.0016 19.0 0.1 0.0052 17.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 ORF39691 - 0.0022 17.3 0.0 0.0035 16.6 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain RNA_helicase PF00910.22 ORF39691 - 0.0079 16.6 0.5 0.035 14.5 0.1 2.4 2 1 0 2 2 1 1 RNA helicase AAA_7 PF12775.7 ORF39691 - 0.0085 15.6 0.2 0.039 13.5 0.2 2.2 1 1 0 1 1 1 1 P-loop containing dynein motor region AAA_28 PF13521.6 ORF39691 - 0.011 16.0 0.0 0.02 15.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF39691 - 0.011 15.7 0.1 0.049 13.5 0.1 2.3 1 1 0 1 1 1 0 NACHT domain Sigma54_activat PF00158.26 ORF39691 - 0.015 15.0 0.1 0.21 11.3 0.0 2.5 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_33 PF13671.6 ORF39691 - 0.015 15.4 0.2 0.026 14.7 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF39691 - 0.018 14.6 0.5 0.05 13.2 0.2 1.9 1 1 0 1 1 1 0 AAA domain DUF815 PF05673.13 ORF39691 - 0.019 14.1 0.0 0.05 12.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_11 PF13086.6 ORF39691 - 0.045 13.5 0.2 0.098 12.4 0.2 1.7 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 ORF39691 - 0.046 13.1 0.1 1.8 7.9 0.0 2.7 2 1 1 3 3 3 0 Bacterial TniB protein Parvo_NS1 PF01057.17 ORF39691 - 0.049 12.7 0.0 0.08 12.0 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 PhoH PF02562.16 ORF39691 - 0.068 12.6 0.1 0.14 11.6 0.1 1.5 1 0 0 1 1 1 0 PhoH-like protein TsaE PF02367.17 ORF39691 - 0.071 13.1 0.1 0.23 11.5 0.1 1.8 1 1 1 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_3 PF07726.11 ORF39691 - 0.085 12.7 0.0 0.58 10.0 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 ORF39691 - 0.11 12.4 0.8 0.64 9.9 0.8 2.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_29 PF13555.6 ORF39691 - 0.12 12.2 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 ORF39691 - 0.14 11.8 0.0 0.33 10.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain uDENN PF03456.18 ORF37821 - 0.00034 21.3 1.2 0.00051 20.7 0.2 1.8 2 0 0 2 2 2 1 uDENN domain DENN PF02141.21 ORF37821 - 0.048 13.6 0.4 0.12 12.3 0.3 1.7 1 1 0 1 1 1 0 DENN (AEX-3) domain Mon2_C PF16206.5 ORF37362 - 4e-07 28.6 0.9 5.4e-07 28.2 0.9 1.1 1 0 0 1 1 1 1 C-terminal region of Mon2 protein Mito_morph_reg PF14972.6 ORF37362 - 0.1 12.2 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial morphogenesis regulator RCC1_2 PF13540.6 ORF27302 - 1.5e-13 50.2 16.1 0.12 12.2 0.2 6.4 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat FtsQ PF03799.15 ORF27302 - 2.2e-06 28.5 0.6 1.5 9.6 0.1 4.8 1 1 5 6 6 6 1 Cell division protein FtsQ DUF3502 PF12010.8 ORF27302 - 5.4e-05 23.8 3.3 16 6.1 0.0 4.8 1 1 4 5 5 5 0 Domain of unknown function (DUF3502) XRCC1_N PF01834.16 ORF27302 - 0.0016 18.5 0.4 15 5.6 0.2 4.6 1 1 5 6 6 6 0 XRCC1 N terminal domain IR1-M PF12185.8 ORF27302 - 0.0044 16.9 0.3 37 4.3 0.0 3.7 4 0 0 4 4 4 0 Nup358/RanBP2 E3 ligase domain Glyco_hydro_88 PF07470.13 ORF27302 - 0.031 13.3 4.6 10 5.1 0.2 4.0 4 1 0 4 4 4 0 Glycosyl Hydrolase Family 88 Methyltransf_29 PF03141.16 ORF27302 - 0.033 12.8 0.8 8 4.9 0.0 3.6 3 1 0 4 4 4 0 Putative S-adenosyl-L-methionine-dependent methyltransferase KASH_CCD PF14662.6 ORF27302 - 0.05 13.4 0.1 0.32 10.8 0.0 2.3 3 0 0 3 3 3 0 Coiled-coil region of CCDC155 or KASH DNA_ligase_A_C PF04679.15 ORF27302 - 0.08 13.5 0.5 55 4.5 0.0 3.6 1 1 3 4 4 4 0 ATP dependent DNA ligase C terminal region Yuri_gagarin PF15934.5 ORF27302 - 0.13 12.1 0.2 5.7 6.7 0.3 2.3 2 0 0 2 2 2 0 Yuri gagarin DNA_pol3_tau_5 PF12170.8 ORF27302 - 0.13 12.3 1.0 28 4.7 0.0 4.0 4 1 0 5 5 5 0 DNA polymerase III tau subunit V interacting with alpha Glyco_hydro_46 PF01374.18 ORF27302 - 0.14 11.8 5.4 8.2 6.0 0.1 3.7 1 1 3 4 4 4 0 Glycosyl hydrolase family 46 AFP_2 PF18815.1 ORF27302 - 2.6 8.3 9.3 21 5.5 0.1 4.2 3 1 2 5 5 4 0 Bacterial antifreeze protein repeat PKD PF00801.20 ORF27302 - 7.9 6.4 11.2 13 5.7 0.6 4.9 5 1 1 6 6 6 0 PKD domain PB1 PF00564.24 ORF24432 - 2.3e-09 37.1 0.4 4.7e-09 36.1 0.4 1.6 1 0 0 1 1 1 1 PB1 domain PAS_9 PF13426.7 ORF24432 - 0.02 15.2 1.3 0.044 14.0 1.3 1.8 1 1 0 1 1 1 0 PAS domain Caudo_bapla_RBP PF08931.10 ORF24432 - 0.048 13.1 0.1 0.065 12.7 0.1 1.1 1 0 0 1 1 1 0 Receptor-binding protein of phage tail base-plate Siphoviridae, head DUF3764 PF12594.8 ORF24432 - 0.11 12.6 1.6 1.8 8.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3764) LCM PF04072.14 ORF2175 - 6.4e-25 88.2 0.0 9.6e-25 87.6 0.0 1.2 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Dala_Dala_lig_C PF07478.13 ORF2125 - 2.6e-72 242.6 0.0 3.3e-72 242.3 0.0 1.1 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Dala_Dala_lig_N PF01820.21 ORF2125 - 1.2e-19 70.7 0.4 3.6e-18 65.9 0.4 2.3 1 1 0 1 1 1 1 D-ala D-ala ligase N-terminus CPSase_L_D2 PF02786.17 ORF2125 - 1.3e-07 31.3 0.0 7.1e-07 28.9 0.0 1.9 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_4 PF13535.6 ORF2125 - 5.9e-07 29.2 0.0 6.2e-06 25.9 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 ORF2125 - 0.00044 19.9 0.0 0.0011 18.6 0.0 1.5 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.6 ORF2125 - 0.0096 15.2 0.0 0.015 14.5 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp TTL PF03133.15 ORF2125 - 0.023 13.8 0.0 0.039 13.1 0.0 1.3 1 0 0 1 1 1 0 Tubulin-tyrosine ligase family ATPgrasp_ST PF14397.6 ORF2125 - 0.026 13.8 0.0 0.048 12.9 0.0 1.3 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp LigA PF07746.11 ORF2125 - 0.037 14.2 0.1 21 5.3 0.0 3.1 2 1 0 2 2 2 0 Aromatic-ring-opening dioxygenase LigAB, LigA subunit GARS_A PF01071.19 ORF2125 - 0.049 13.4 0.0 0.065 13.0 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RimK PF08443.11 ORF2125 - 0.056 13.0 0.0 0.5 9.9 0.0 2.0 1 1 0 1 1 1 0 RimK-like ATP-grasp domain DUF155 PF02582.14 ORF18974 - 8.2e-22 78.1 0.0 1e-21 77.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YagE family COG1723 CTNNBL PF08216.11 ORF18478 - 0.057 13.6 2.1 0.17 12.1 0.2 2.4 2 1 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear NIF PF03031.18 ORF17543 - 5.2e-20 71.8 0.0 6.4e-20 71.5 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase HAD_SAK_2 PF18143.1 ORF17543 - 2.1e-09 37.8 0.1 1.4e-07 31.9 0.0 2.4 2 0 0 2 2 2 1 HAD domain in Swiss Army Knife RNA repair proteins Paramyxo_P_V_N PF13825.6 ORF17543 - 0.29 10.5 0.0 0.42 10.0 0.0 1.1 1 0 0 1 1 1 0 Paramyxovirus structural protein V/P N-terminus FN3_7 PF18447.1 ORF17294 - 0.36 11.2 4.2 2.9 8.2 0.0 2.4 2 0 0 2 2 2 0 Fibronectin type III domain RRM_1 PF00076.22 ORF16853 - 0.0049 16.7 0.1 0.026 14.4 0.1 2.0 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 ORF16853 - 0.028 14.5 0.0 0.048 13.8 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif CheC PF04509.12 ORF151714 - 3.6 7.6 5.1 0.47 10.4 0.4 2.0 2 0 0 2 2 2 0 CheC-like family LisH PF08513.11 ORF150664 - 0.08 12.9 0.1 0.32 11.0 0.0 2.1 2 0 0 2 2 2 0 LisH Bax1-I PF01027.20 ORF138689 - 3e-37 128.5 28.9 3.5e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF138689 - 1.8 9.3 17.3 2.6 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF138689 - 2.8 8.0 8.1 7 6.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) DUF3994 PF13159.6 ORF133469 - 0.066 13.8 0.3 8.6 7.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3994) MORN PF02493.20 ORF133469 - 0.072 13.0 2.5 0.85 9.6 0.4 2.8 2 0 0 2 2 2 0 MORN repeat DUF3489 PF11994.8 ORF133469 - 0.12 12.4 0.4 0.34 11.0 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3489) TonB_dep_Rec PF00593.24 ORF1333 - 1.3e-49 170.4 11.8 1.6e-49 170.1 11.8 1.0 1 0 0 1 1 1 1 TonB dependent receptor OMP_b-brl_3 PF14905.6 ORF1333 - 7.1e-11 41.7 0.1 8.7e-11 41.4 0.1 1.1 1 0 0 1 1 1 1 Outer membrane protein beta-barrel family Metallophos PF00149.28 ORF127398 - 2.6e-40 139.1 0.1 3.3e-40 138.8 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF127398 - 8.2e-05 23.0 0.2 0.00018 21.9 0.2 1.5 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Metallophos_2 PF12850.7 ORF127398 - 0.11 12.6 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain TFIIA PF03153.13 ORF126969 - 3.8 7.4 39.8 5.1 7.0 39.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF2207 PF09972.9 ORF126969 - 4.5 5.9 5.1 1.2 7.8 1.3 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) Bax1-I PF01027.20 ORF122692 - 3e-37 128.5 28.9 3.5e-37 128.2 28.9 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 YppG PF14179.6 ORF122692 - 1.8 9.3 17.3 2.6 8.8 17.3 1.2 1 0 0 1 1 1 0 YppG-like protein DUF3278 PF11683.8 ORF122692 - 2.8 8.0 8.1 7 6.8 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3278) Bax1-I PF01027.20 ORF121112 - 5.3e-33 114.6 27.8 6.2e-33 114.4 27.8 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF121112 - 4.4e-07 29.7 4.5 6.7e-07 29.1 4.5 1.3 1 0 0 1 1 1 1 Bax inhibitor 1 like DUF2070 PF09843.9 ORF121112 - 0.77 8.0 15.7 1.1 7.5 15.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PsbH PF00737.20 ORF121112 - 1.2 8.9 8.9 0.19 11.5 0.6 3.0 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein VIT1 PF01988.19 ORF121112 - 2.7 7.8 10.9 0.81 9.5 0.0 2.2 1 1 0 2 2 2 0 VIT family DUF2721 PF11026.8 ORF121112 - 2.8 7.8 7.1 1.6e+02 2.1 8.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) CYSTM PF12734.7 ORF121112 - 8.6 6.8 6.7 32 5.0 6.7 2.1 1 0 0 1 1 1 0 Cysteine-rich TM module stress tolerance EamA PF00892.20 ORF119717 - 6.5e-24 84.7 32.0 1.7e-16 60.6 13.0 2.1 2 0 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 ORF119717 - 0.001 18.4 16.1 0.002 17.4 16.1 1.5 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport Abhydrolase_3 PF07859.13 ORF118172 - 3.3e-35 121.9 0.0 4.1e-35 121.6 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF118172 - 1.4e-08 34.0 0.2 2e-08 33.5 0.2 1.3 1 0 0 1 1 1 1 Steryl acetyl hydrolase GntP_permease PF02447.16 ORF118100 - 7.7e-97 324.8 24.7 8.6e-97 324.6 24.7 1.0 1 0 0 1 1 1 1 GntP family permease Lip_A_acyltrans PF03279.13 ORF116905 - 2e-118 394.9 0.3 2.2e-118 394.7 0.3 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase ESSS PF10183.9 ORF116905 - 0.059 13.6 0.2 0.23 11.7 0.1 2.0 2 0 0 2 2 2 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) CxC7 PF18866.1 ORF115537 - 0.0016 18.5 0.1 0.021 14.9 0.0 2.7 3 0 0 3 3 3 1 CxC7 like cysteine cluster associated with KDZ transposases DUF2475 PF10629.9 ORF115430 - 4.7e-06 26.7 3.5 0.025 14.8 0.0 4.0 4 0 0 4 4 4 2 Protein of unknown function (DUF2475) FTCD_N PF07837.12 ORF115430 - 0.15 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Formiminotransferase domain, N-terminal subdomain PARP PF00644.20 ORF106475 - 7.4e-10 38.7 0.0 1.1e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain O-FucT PF10250.9 ORF99103 - 8.4e-26 91.5 0.0 9.3e-26 91.3 0.0 1.1 1 0 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase UPF0052 PF01933.18 ORF99103 - 0.018 14.3 0.0 0.022 14.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0052 baeRF_family2 PF18844.1 ORF99103 - 0.059 13.4 0.1 0.081 13.0 0.1 1.2 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 CTP_transf_like PF01467.26 ORF97851 - 0.011 15.9 0.0 0.03 14.5 0.0 2.0 1 1 0 1 1 1 0 Cytidylyltransferase-like Ldh_1_C PF02866.18 ORF96339 - 4.8e-27 94.9 0.1 6.1e-27 94.6 0.1 1.1 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Ldh_1_N PF00056.23 ORF96339 - 4.2e-18 65.8 0.0 1.1e-17 64.4 0.0 1.7 2 0 0 2 2 2 1 lactate/malate dehydrogenase, NAD binding domain HTH_Tnp_4 PF13613.6 ORF96339 - 0.073 12.8 0.0 0.17 11.6 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease Metallophos PF00149.28 ORF94870 - 1.2e-10 42.2 1.0 1.8e-10 41.6 1.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF94870 - 0.013 15.7 0.0 0.12 12.6 0.0 2.0 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Metallophos_C PF14008.6 ORF94870 - 0.11 13.3 0.6 0.29 12.0 0.6 1.6 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C TPR_12 PF13424.6 ORF93124 - 3.5e-11 43.2 3.2 9.4e-07 29.0 0.1 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF93124 - 1.6e-08 34.0 14.0 0.00018 21.1 1.3 4.7 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF93124 - 1.1e-06 28.3 11.3 0.0015 18.5 0.7 4.7 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF93124 - 4.7e-05 23.1 3.2 0.011 15.7 0.2 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF93124 - 0.00038 20.9 2.0 0.88 10.3 0.1 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF93124 - 0.0015 19.2 0.1 0.31 12.0 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF93124 - 0.0019 18.3 18.2 0.004 17.2 1.3 4.7 6 0 0 6 6 5 2 Tetratricopeptide repeat DUF4449 PF14613.6 ORF93124 - 0.013 15.6 0.4 0.037 14.1 0.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4449) SNAP PF14938.6 ORF93124 - 0.039 13.4 7.7 0.082 12.3 7.4 1.6 1 1 0 1 1 1 0 Soluble NSF attachment protein, SNAP YbfN PF13982.6 ORF93124 - 0.046 14.0 0.3 1.9 8.8 0.4 2.3 2 0 0 2 2 2 0 YbfN-like lipoprotein TPR_10 PF13374.6 ORF93124 - 0.066 13.1 2.8 0.3 11.0 0.1 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat SPO22 PF08631.10 ORF93124 - 0.11 11.9 1.9 0.15 11.5 0.5 1.8 2 0 0 2 2 2 0 Meiosis protein SPO22/ZIP4 like Mad3_BUB1_I PF08311.12 ORF93124 - 0.53 10.3 5.6 2.3 8.2 0.3 3.1 2 1 0 2 2 2 0 Mad3/BUB1 homology region 1 Metallophos PF00149.28 ORF87911 - 2e-36 126.4 0.1 3.3e-36 125.7 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase TPR_2 PF07719.17 ORF84982 - 9.4e-16 56.6 0.6 4.8e-05 23.1 0.0 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF84982 - 4e-15 54.9 0.2 9.7e-05 22.0 0.3 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF84982 - 4.3e-10 38.9 0.2 0.0067 16.4 0.0 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF84982 - 3.6e-09 36.1 0.6 0.0062 16.7 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF84982 - 3.8e-07 30.3 0.5 0.0015 18.8 0.0 3.2 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF84982 - 6e-07 29.8 0.9 0.11 13.4 0.0 3.7 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF84982 - 1.7e-05 24.4 1.3 0.0043 16.7 0.0 3.7 2 1 2 4 4 4 1 TPR repeat TPR_10 PF13374.6 ORF84982 - 4.8e-05 23.1 0.7 0.068 13.1 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF84982 - 0.00064 20.3 0.8 0.16 12.6 0.1 2.9 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF84982 - 0.00068 19.8 0.2 0.083 13.3 0.1 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF84982 - 0.0018 18.8 0.1 10 7.0 0.0 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat MIT PF04212.18 ORF84982 - 0.0032 17.5 0.0 17 5.5 0.0 3.3 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain ANAPC5 PF12862.7 ORF84982 - 0.01 15.9 0.1 0.027 14.5 0.1 1.8 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 5 TPR_19 PF14559.6 ORF84982 - 0.016 15.7 0.0 3.4 8.2 0.0 2.8 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF84982 - 0.018 15.2 1.3 0.12 12.5 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_15 PF13429.6 ORF84982 - 0.019 14.2 0.1 0.03 13.5 0.1 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF84982 - 0.026 13.9 0.4 0.04 13.3 0.4 1.3 1 0 0 1 1 1 0 MalT-like TPR region PDZ_6 PF17820.1 ORF83461 - 1.3e-05 24.9 0.0 4.1e-05 23.3 0.0 1.9 1 0 0 1 1 1 1 PDZ domain zf-RanBP PF00641.18 ORF83461 - 0.00053 19.2 1.9 0.0011 18.3 1.9 1.5 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others PDZ PF00595.24 ORF83461 - 0.01 16.2 0.0 0.02 15.2 0.0 1.4 1 0 0 1 1 1 0 PDZ domain DNA_RNApol_7kD PF03604.13 ORF83461 - 0.17 11.6 2.9 0.48 10.2 2.9 1.8 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit OrfB_Zn_ribbon PF07282.11 ORF83461 - 3.3 7.7 7.5 7.2 6.6 0.3 3.0 2 1 2 4 4 4 0 Putative transposase DNA-binding domain Acyl-CoA_dh_1 PF00441.24 ORF82049 - 3e-34 118.4 0.1 4e-34 118.0 0.1 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 ORF82049 - 3.6e-19 68.7 0.1 5.8e-19 68.1 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 ORF82049 - 1.6e-05 25.1 0.0 2.4e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Ribo_biogen_C PF04034.13 ORF81670 - 0.049 13.4 1.1 0.13 12.0 0.2 2.0 2 0 0 2 2 2 0 Ribosome biogenesis protein, C-terminal Fez1 PF06818.15 ORF80272 - 0.009 16.5 26.5 0.009 16.5 26.5 2.2 2 0 0 2 2 2 1 Fez1 EzrA PF06160.12 ORF80272 - 0.011 13.9 15.9 0.024 12.8 15.9 1.5 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA NPV_P10 PF05531.12 ORF80272 - 1.1 9.8 7.5 1.1 9.7 0.7 2.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Baculo_F PF12259.8 ORF80272 - 1.4 7.3 10.8 2 6.8 1.1 2.0 1 1 1 2 2 2 0 Baculovirus F protein DUF948 PF06103.11 ORF80272 - 5.2 7.4 6.5 15 5.9 3.4 2.7 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) Tubulin PF00091.25 ORF79539 - 1e-50 172.7 0.3 1.4e-50 172.2 0.3 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 ORF79539 - 3.6e-05 24.0 0.1 6.8e-05 23.2 0.1 1.5 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 ORF79539 - 7.3e-05 22.5 0.0 0.00027 20.7 0.0 1.8 2 0 0 2 2 2 1 Tubulin domain Tubulin_2 PF13809.6 ORF79539 - 0.026 13.7 0.0 0.041 13.1 0.0 1.3 1 0 0 1 1 1 0 Tubulin like Band_7 PF01145.25 ORF78451 - 2.3e-16 60.3 0.2 3.4e-16 59.8 0.2 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family DUF2198 PF09964.9 ORF78451 - 2.2 8.4 5.2 5.4 7.2 0.1 3.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2198) DUF2530 PF10745.9 ORF76834 - 0.55 10.5 4.0 1.8 8.9 0.1 3.5 4 1 0 4 4 4 0 Protein of unknown function (DUF2530) S1-P1_nuclease PF02265.16 ORF74231 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF74231 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF74231 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) Aldo_ket_red PF00248.21 ORF70913 - 3.1e-52 177.6 0.0 7.9e-52 176.3 0.0 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family Peptidase_C14 PF00656.22 ORF63535 - 0.003 17.5 0.2 0.0079 16.2 0.2 1.7 1 1 0 1 1 1 1 Caspase domain TFIIA PF03153.13 ORF63535 - 0.018 15.1 0.0 0.018 15.1 0.0 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Pkinase PF00069.25 ORF63358 - 4.8e-51 173.6 0.0 6.2e-51 173.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF63358 - 4.9e-21 75.2 0.0 6.5e-21 74.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF63358 - 0.021 14.2 0.0 0.027 13.8 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Haspin_kinase PF12330.8 ORF63358 - 0.028 13.4 0.0 0.044 12.7 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 ORF63358 - 0.11 11.8 0.0 0.19 11.0 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Methyltransf_23 PF13489.6 ORF59771 - 0.0054 16.6 0.0 0.0095 15.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF59771 - 0.074 13.7 0.0 0.74 10.5 0.0 2.6 3 1 0 3 3 3 0 Methyltransferase domain Methyltransf_25 PF13649.6 ORF59771 - 0.076 13.7 0.7 0.24 12.1 0.0 2.2 3 0 0 3 3 3 0 Methyltransferase domain TehB PF03848.14 ORF59771 - 0.12 11.8 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB zf-RING_2 PF13639.6 ORF58549 - 6.2e-12 45.6 10.7 6.2e-12 45.6 10.7 2.2 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF58549 - 7.4e-07 28.8 1.8 7.4e-07 28.8 1.8 2.1 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF58549 - 7.4e-07 29.1 11.2 7.4e-07 29.1 11.2 1.8 2 0 0 2 2 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF58549 - 1.3e-06 28.1 12.2 1.3e-06 28.1 12.2 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF58549 - 2e-06 27.5 9.9 2e-06 27.5 9.9 1.7 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF58549 - 6.6e-06 26.3 11.8 6.6e-06 26.3 11.8 2.5 3 1 0 3 3 2 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF58549 - 1.7e-05 24.7 7.2 1.7e-05 24.7 7.2 2.0 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF58549 - 0.00052 19.8 9.8 0.00052 19.8 9.8 2.4 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF58549 - 0.0021 18.1 5.2 0.0055 16.7 5.2 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger mRNA_stabil PF13929.6 ORF58549 - 0.28 10.1 0.0 0.4 9.6 0.0 1.2 1 0 0 1 1 1 0 mRNA stabilisation zf-C3H2C3 PF17122.5 ORF58549 - 0.6 10.2 8.7 0.27 11.3 4.7 2.3 2 0 0 2 2 2 0 Zinc-finger FANCL_C PF11793.8 ORF58549 - 1.1 9.5 6.6 12 6.1 6.7 2.6 1 1 1 2 2 2 0 FANCL C-terminal domain zf-Nse PF11789.8 ORF58549 - 1.3 8.9 7.8 2.6 7.9 7.8 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_ribbon_17 PF17120.5 ORF58549 - 3.8 7.2 12.2 0.047 13.3 4.6 1.9 2 0 0 2 2 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 ORF58549 - 9.9 6.4 13.7 44 4.4 13.7 2.2 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING TANGO2 PF05742.12 ORF55459 - 5.7e-37 128.1 0.0 6.5e-37 127.9 0.0 1.0 1 0 0 1 1 1 1 Transport and Golgi organisation 2 MORN PF02493.20 ORF5366 - 2.2e-58 190.8 70.6 3e-08 33.1 3.9 10.9 10 1 0 10 10 10 10 MORN repeat DUF2491 PF10679.9 ORF5366 - 1.8 7.7 4.6 0.73 9.0 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2491) Methyltransf_3 PF01596.17 ORF51379 - 5.5e-10 38.8 0.0 8e-10 38.2 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF51379 - 4.9e-06 27.5 0.1 8.5e-06 26.7 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 ORF51379 - 0.069 12.7 0.1 0.1 12.1 0.1 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_23 PF13489.6 ORF51379 - 0.08 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Citrate_bind PF16114.5 ORF51379 - 0.14 11.7 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 ATP citrate lyase citrate-binding ERGIC_N PF13850.6 ORF50132 - 0.0024 18.2 0.1 0.0046 17.3 0.1 1.5 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ODV-E18 PF10717.9 ORF50132 - 0.061 13.2 0.9 0.16 11.9 0.9 1.6 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Baculo_11_kDa PF06143.11 ORF50132 - 0.27 10.8 1.4 0.51 10.0 1.4 1.3 1 0 0 1 1 1 0 Baculovirus 11 kDa family WYL_3 PF18488.1 ORF49179 - 0.00043 20.6 0.5 0.001 19.4 0.5 1.6 1 0 0 1 1 1 1 WYL domain DAG_kinase_N PF14513.6 ORF49179 - 0.0041 17.3 0.3 0.0041 17.3 0.3 1.6 2 0 0 2 2 2 1 Diacylglycerol kinase N-terminus Interferon PF00143.19 ORF49179 - 0.058 13.6 0.1 0.11 12.7 0.1 1.4 1 0 0 1 1 1 0 Interferon alpha/beta domain S1-P1_nuclease PF02265.16 ORF47476 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF47476 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF47476 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) Snapin_Pallidin PF14712.6 ORF37997 - 0.0044 17.4 0.3 3.4 8.2 0.1 2.4 1 1 1 2 2 2 2 Snapin/Pallidin DUF1664 PF07889.12 ORF37997 - 0.0069 16.4 0.3 0.014 15.4 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DivIC PF04977.15 ORF37997 - 0.021 14.6 0.1 0.038 13.7 0.1 1.4 1 0 0 1 1 1 0 Septum formation initiator CENP-F_leu_zip PF10473.9 ORF37997 - 0.025 14.6 0.1 0.044 13.8 0.1 1.3 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1515 PF07439.11 ORF37997 - 0.025 14.6 0.0 0.35 10.9 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1515) Fez1 PF06818.15 ORF37997 - 0.056 13.9 0.1 0.08 13.4 0.1 1.2 1 0 0 1 1 1 0 Fez1 Spc7 PF08317.11 ORF37997 - 0.12 11.3 0.1 0.16 10.8 0.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein COG2 PF06148.11 ORF37997 - 0.14 12.3 0.3 0.33 11.1 0.3 1.6 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 CTP_transf_1 PF01148.20 ORF36645 - 3e-51 174.7 8.6 3.6e-51 174.5 8.6 1.0 1 0 0 1 1 1 1 Cytidylyltransferase family Organ_specific PF10950.8 ORF36336 - 0.31 11.8 12.5 0.44 11.3 1.0 2.5 2 1 0 2 2 2 0 Organ specific protein AP3D1 PF06375.11 ORF31777 - 1.7 8.9 6.4 2.7 8.2 0.0 2.1 2 0 0 2 2 2 0 AP-3 complex subunit delta-1 Metallophos PF00149.28 ORF30634 - 3.1e-33 116.0 0.2 4.3e-33 115.6 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Hydrolase_4 PF12146.8 ORF30305 - 2.8e-16 59.5 0.0 6.9e-11 41.9 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 AXE1 PF05448.12 ORF30305 - 3.9e-13 48.8 0.3 3.3e-05 22.7 0.1 3.2 2 1 1 3 3 3 3 Acetyl xylan esterase (AXE1) Abhydrolase_1 PF00561.20 ORF30305 - 1.1e-08 35.0 0.1 5.5e-05 22.9 0.0 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 ORF30305 - 3.2e-07 30.4 1.2 0.00081 19.2 0.1 3.2 2 1 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 ORF30305 - 0.0002 21.3 0.0 0.0004 20.3 0.0 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 ORF30305 - 0.0003 20.4 0.0 0.38 10.3 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family Abhydrolase_5 PF12695.7 ORF30305 - 0.00039 20.2 0.0 0.21 11.3 0.0 2.4 1 1 1 2 2 2 2 Alpha/beta hydrolase family FSH1 PF03959.13 ORF30305 - 0.00062 19.5 0.0 0.0017 18.0 0.0 1.7 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S9 PF00326.21 ORF30305 - 0.0011 18.5 0.0 0.0022 17.5 0.0 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF30305 - 0.011 16.4 0.0 0.014 16.0 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Lipase_3 PF01764.25 ORF30305 - 0.036 13.9 0.0 0.11 12.4 0.0 1.8 2 0 0 2 2 2 0 Lipase (class 3) DUF2407_C PF13373.6 ORF29026 - 0.093 12.9 0.2 0.45 10.7 0.0 2.0 2 0 0 2 2 2 0 DUF2407 C-terminal domain Rap1a PF18602.1 ORF28410 - 0.055 13.8 0.1 0.12 12.7 0.1 1.4 1 0 0 1 1 1 0 Rap1a immunity proteins CBM_1 PF00734.18 ORF23499 - 5 7.2 11.6 13 5.9 2.9 3.5 3 0 0 3 3 3 0 Fungal cellulose binding domain OTU PF02338.19 ORF22002 - 1.5e-17 64.3 0.1 3.2e-17 63.2 0.1 1.5 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF22002 - 0.0076 15.7 6.3 1.2 8.5 0.0 2.8 2 1 0 2 2 2 2 Peptidase C65 Otubain Peptidase_C1 PF00112.23 ORF18190 - 8.9e-65 218.8 4.4 1.1e-64 218.6 4.4 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF18190 - 0.001 18.0 0.3 0.14 10.9 0.1 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Propeptide_C1 PF08127.13 ORF18190 - 0.057 13.3 0.0 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 Peptidase family C1 propeptide Peptidase_C1 PF00112.23 ORF17747 - 8.9e-65 218.8 4.4 1.1e-64 218.6 4.4 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF17747 - 0.001 18.0 0.3 0.14 10.9 0.1 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Propeptide_C1 PF08127.13 ORF17747 - 0.057 13.3 0.0 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 Peptidase family C1 propeptide Hist_deacetyl PF00850.19 ORF15690 - 7.4e-21 74.9 0.0 9.8e-21 74.5 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain REV PF00424.18 ORF15690 - 0.13 12.3 0.4 0.25 11.4 0.4 1.4 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) DUF1664 PF07889.12 ORF149342 - 0.1 12.7 3.1 0.24 11.5 3.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) CpcD PF01383.21 ORF149342 - 0.15 12.4 0.1 0.47 10.8 0.1 1.9 1 0 0 1 1 1 0 CpcD/allophycocyanin linker domain DUF2089 PF09862.9 ORF149342 - 0.37 10.8 4.2 0.14 12.2 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2089) Neil1-DNA_bind PF09292.10 ORF149342 - 0.37 10.8 0.2 0.37 10.8 0.2 2.5 3 0 0 3 3 3 0 Endonuclease VIII-like 1, DNA bind DUF4370 PF14290.6 ORF149342 - 0.76 9.6 5.4 0.64 9.8 2.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4370) BLOC1_2 PF10046.9 ORF149342 - 5.9 7.3 17.4 0.047 14.0 6.3 2.9 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4378 PF14309.6 ORF13827 - 9.1e-08 32.7 5.1 6e-07 30.0 5.1 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4378) RMI1_C PF16099.5 ORF13827 - 0.097 12.5 0.8 4.4 7.2 0.2 2.3 2 0 0 2 2 2 0 Recq-mediated genome instability protein 1, C-terminal OB-fold Ribosomal_L16 PF00252.18 ORF13659 - 2.1e-32 111.9 0.0 2.9e-32 111.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e ASFV_J13L PF05568.11 ORF13659 - 4 7.1 9.7 6.3 6.5 9.7 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Enterotoxin_ST PF02048.16 ORF127998 - 0.024 15.1 0.1 0.079 13.4 0.1 1.9 1 0 0 1 1 1 0 Heat-stable enterotoxin ST S1-P1_nuclease PF02265.16 ORF127713 - 5e-49 167.4 0.1 5.7e-49 167.2 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF127713 - 0.02 13.5 1.5 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF127713 - 0.025 15.0 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) PhyH PF05721.13 ORF126366 - 2e-08 34.8 0.2 3.4e-07 30.7 0.0 2.1 2 0 0 2 2 2 1 Phytanoyl-CoA dioxygenase (PhyH) S1-P1_nuclease PF02265.16 ORF123593 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF123593 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF123593 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) S1-P1_nuclease PF02265.16 ORF12228 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF12228 - 0.0092 14.7 1.4 0.13 10.9 0.6 2.0 2 0 0 2 2 2 2 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF12228 - 0.025 15.0 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) DUF3780 PF12635.7 ORF121280 - 1.3 8.7 5.8 0.44 10.3 2.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3780) NTP_transferase PF00483.23 ORF114901 - 1.5e-72 244.1 0.0 1.8e-72 243.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 ORF114901 - 6.5e-10 39.6 0.0 8.7e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 ORF114901 - 0.00091 19.0 0.0 0.0014 18.4 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glyco_hydro_63N PF16923.5 ORF114901 - 0.11 12.5 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolase family 63 N-terminal domain DUF3363 PF11843.8 ORF114901 - 0.19 10.6 0.0 0.33 9.9 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3363) S1-P1_nuclease PF02265.16 ORF113906 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF113906 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF113906 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) S1-P1_nuclease PF02265.16 ORF111819 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF111819 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF111819 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks60.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks60.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks60.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks60.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:20 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- WYL_3 PF18488.1 ORF107526 - 0.00043 20.6 0.5 0.001 19.4 0.5 1.6 1 0 0 1 1 1 1 WYL domain DAG_kinase_N PF14513.6 ORF107526 - 0.0041 17.3 0.3 0.0041 17.3 0.3 1.6 2 0 0 2 2 2 1 Diacylglycerol kinase N-terminus Interferon PF00143.19 ORF107526 - 0.058 13.6 0.1 0.11 12.7 0.1 1.4 1 0 0 1 1 1 0 Interferon alpha/beta domain S1-P1_nuclease PF02265.16 ORF103308 - 6.9e-49 166.9 0.1 7.8e-49 166.8 0.1 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Carn_acyltransf PF00755.20 ORF103308 - 0.011 14.5 1.7 0.13 10.8 0.7 2.0 2 0 0 2 2 2 0 Choline/Carnitine o-acyltransferase DUF2274 PF10038.9 ORF103308 - 0.024 15.1 0.2 0.59 10.6 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2274) VWD PF00094.25 ORF102038 - 0.0023 18.2 0.1 0.004 17.4 0.1 1.6 1 1 0 1 1 1 1 von Willebrand factor type D domain Phage_TAC_14 PF16462.5 ORF102038 - 0.19 12.0 0.2 0.46 10.7 0.1 1.7 2 0 0 2 2 2 0 Phage tail assembly chaperone protein, TAC Myticin-prepro PF10690.9 ORF100740 - 4.2 7.7 5.5 1.3 9.3 1.7 2.1 1 1 1 2 2 2 0 Myticin pre-proprotein from the mussel Tox-ODYAM1 PF15642.6 NODE_22390_length_910_cov_84.914286_g17308_i0reverse_frame_1 - 0.23 10.4 17.1 0.33 9.9 17.1 1.3 1 0 0 1 1 1 0 Toxin in Odyssella and Amoebophilus CAF-1_p150 PF11600.8 NODE_22390_length_910_cov_84.914286_g17308_i0reverse_frame_1 - 1.3 8.7 37.6 3.3 7.4 37.6 1.6 1 0 0 1 1 1 0 Chromatin assembly factor 1 complex p150 subunit, N-terminal SMYLE_N PF18615.1 NODE_22329_length_911_cov_2662.610731_g15768_i3forward_frame_1 - 0.18 11.3 0.9 0.25 10.9 0.9 1.1 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain DUF2373 PF10180.9 NODE_22307_length_912_cov_139.637400_g17236_i0forward_frame_1 - 2.6e-18 65.6 0.0 6e-18 64.4 0.0 1.6 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2373) PGA_cap PF09587.10 NODE_22307_length_912_cov_139.637400_g17236_i0forward_frame_1 - 0.016 14.6 0.0 0.031 13.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap NOT2_3_5 PF04153.18 NODE_22307_length_912_cov_139.637400_g17236_i0forward_frame_1 - 0.094 12.8 0.2 0.2 11.8 0.2 1.5 1 0 0 1 1 1 0 NOT2 / NOT3 / NOT5 family Complex1_LYR_2 PF13233.6 NODE_22307_length_912_cov_139.637400_g17236_i0forward_frame_1 - 0.13 13.0 1.6 0.45 11.3 0.1 2.5 3 0 0 3 3 3 0 Complex1_LYR-like Cation_ATPase PF13246.6 NODE_22272_length_913_cov_115.993166_g17206_i0forward_frame_2 - 6.5e-12 45.4 0.1 2e-11 43.8 0.1 1.9 1 1 0 1 1 1 1 Cation transport ATPase (P-type) MscS_porin PF12795.7 NODE_22240_length_914_cov_92.792947_g17179_i0forward_frame_3 - 0.0041 16.7 30.5 0.0041 16.7 30.5 2.6 3 1 0 3 3 3 1 Mechanosensitive ion channel porin domain Fez1 PF06818.15 NODE_22240_length_914_cov_92.792947_g17179_i0forward_frame_3 - 0.072 13.5 42.3 0.49 10.8 9.6 3.1 1 1 2 3 3 3 0 Fez1 TMF_DNA_bd PF12329.8 NODE_22240_length_914_cov_92.792947_g17179_i0forward_frame_3 - 0.93 9.5 57.1 0.035 14.1 25.2 4.4 2 2 2 4 4 4 0 TATA element modulatory factor 1 DNA binding DUF812 PF05667.11 NODE_22240_length_914_cov_92.792947_g17179_i0forward_frame_3 - 2.5 6.9 38.8 3.5 6.4 31.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF812) Golgin_A5 PF09787.9 NODE_22240_length_914_cov_92.792947_g17179_i0forward_frame_3 - 5.8 6.3 43.6 0.73 9.2 27.1 3.1 1 1 2 3 3 3 0 Golgin subfamily A member 5 Mito_carr PF00153.27 ORF99900 - 4.8e-68 225.1 3.8 2e-23 82.1 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Chloroa_b-bind PF00504.21 ORF99352 - 3.6e-45 154.4 1.0 6.1e-29 101.6 0.5 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein GFP PF01353.22 ORF98514 - 0.011 15.3 0.4 0.031 13.7 0.1 1.8 2 0 0 2 2 2 0 Green fluorescent protein MORN PF02493.20 ORF98089 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF98089 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain ART PF01129.18 ORF91383 - 0.0013 18.1 0.0 0.0023 17.3 0.0 1.4 1 1 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase DUF4373 PF14297.6 ORF91383 - 0.044 14.6 0.2 0.12 13.2 0.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4373) Rep_fac_C PF08542.11 ORF91383 - 0.14 12.6 0.1 0.57 10.6 0.1 2.0 2 0 0 2 2 2 0 Replication factor C C-terminal domain MORN PF02493.20 ORF9081 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF9081 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain SNARE PF05739.19 ORF87985 - 3.5e-05 23.7 3.4 4e-05 23.5 1.3 2.2 2 0 0 2 2 2 1 SNARE domain DUF4200 PF13863.6 ORF87985 - 0.03 14.7 3.4 0.03 14.7 3.4 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4200) Consortin_C PF15281.6 ORF87985 - 0.052 13.5 0.8 0.052 13.5 0.8 3.2 3 1 2 5 5 5 0 Consortin C-terminus DUF745 PF05335.13 ORF87985 - 0.48 10.1 15.4 0.19 11.4 3.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF745) SlyX PF04102.12 ORF87985 - 2.3 8.9 14.2 25 5.6 2.7 4.5 4 0 0 4 4 4 0 SlyX IFT57 PF10498.9 ORF87985 - 9.4 5.1 34.4 0.098 11.6 6.9 2.4 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 TRAM_LAG1_CLN8 PF03798.16 ORF8378 - 2.6e-14 53.4 1.8 3.9e-14 52.8 1.8 1.2 1 0 0 1 1 1 1 TLC domain MORN PF02493.20 ORF83557 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF83557 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain Porin_3 PF01459.22 ORF81531 - 2.4e-13 50.2 4.9 2.8e-13 49.9 4.9 1.1 1 0 0 1 1 1 1 Eukaryotic porin TRAPPC9-Trs120 PF08626.11 ORF80829 - 3.6 4.8 4.6 4.5 4.5 4.6 1.1 1 0 0 1 1 1 0 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit His_Phos_1 PF00300.22 ORF79523 - 2.1e-18 66.7 0.2 3.3e-18 66.1 0.2 1.3 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) VPS13 PF16908.5 ORF77947 - 8.1e-21 74.9 8.3 3.3e-20 72.9 8.3 1.8 1 1 0 1 1 1 1 Vacuolar sorting-associated protein 13, N-terminal CRAL_TRIO_N PF03765.15 ORF77947 - 0.26 11.5 2.7 14 6.0 0.0 3.3 3 0 0 3 3 3 0 CRAL/TRIO, N-terminal domain Chloroa_b-bind PF00504.21 ORF77565 - 3.6e-45 154.4 1.0 6.1e-29 101.6 0.5 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein Porin_3 PF01459.22 ORF73630 - 2.4e-13 50.2 4.9 2.8e-13 49.9 4.9 1.1 1 0 0 1 1 1 1 Eukaryotic porin Aldo_ket_red PF00248.21 ORF72435 - 9.4e-49 166.2 0.2 1.6e-48 165.4 0.2 1.4 1 1 0 1 1 1 1 Aldo/keto reductase family BcrAD_BadFG PF01869.20 ORF72435 - 0.24 10.9 0.0 0.33 10.4 0.0 1.3 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family LysR_substrate PF03466.20 ORF72133 - 1.5e-44 151.8 0.0 2.3e-44 151.3 0.0 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF72133 - 8.3e-21 73.7 1.1 3.8e-20 71.6 1.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_24 PF13412.6 ORF72133 - 0.054 13.1 0.0 0.33 10.5 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Rhomboid PF01694.22 ORF7075 - 1.2e-20 74.1 18.5 1.2e-20 74.1 18.5 2.5 3 0 0 3 3 3 2 Rhomboid family UCH PF00443.29 ORF69348 - 7.2e-27 94.5 7.7 8.9e-27 94.2 7.7 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF69348 - 4.2e-08 33.2 6.4 9.3e-08 32.0 6.4 1.5 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase CRT-like PF08627.10 ORF69348 - 0.094 11.7 0.4 0.2 10.6 0.4 1.5 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like MORN PF02493.20 ORF69324 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF69324 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain UCH PF00443.29 ORF65514 - 7.2e-27 94.5 7.7 8.9e-27 94.2 7.7 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF65514 - 4.2e-08 33.2 6.4 9.3e-08 32.0 6.4 1.5 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase CRT-like PF08627.10 ORF65514 - 0.094 11.7 0.4 0.2 10.6 0.4 1.5 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like MORN PF02493.20 ORF64755 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF64755 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain Sec23_trunk PF04811.15 ORF63237 - 3.8e-42 144.5 0.4 4.7e-42 144.2 0.4 1.1 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain EF-hand_1 PF00036.32 ORF60604 - 0.0071 15.8 0.2 0.026 14.1 0.2 2.0 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF60604 - 0.011 15.6 0.1 0.077 13.0 0.1 2.5 2 0 0 2 2 2 0 EF-hand domain CdiI_2 PF18593.1 ORF60604 - 0.057 14.1 0.4 9.8 6.9 0.0 2.7 2 0 0 2 2 2 0 CdiI immunity protein Chloroa_b-bind PF00504.21 ORF60135 - 3.6e-45 154.4 1.0 6.1e-29 101.6 0.5 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein F-box PF00646.33 ORF58030 - 0.0019 18.0 0.2 0.0037 17.1 0.2 1.6 1 0 0 1 1 1 1 F-box domain zf-RING_2 PF13639.6 ORF56568 - 2.4e-09 37.4 10.2 2.4e-09 37.4 10.2 2.7 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF56568 - 2.6e-08 34.0 7.6 2.6e-08 34.0 7.6 3.0 2 1 0 2 2 1 1 RING-H2 zinc finger domain Zn_ribbon_17 PF17120.5 ORF56568 - 5.5e-07 29.1 7.5 5.5e-07 29.1 7.5 2.7 2 1 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 ORF56568 - 1.2e-06 28.2 10.0 1.2e-06 28.2 10.0 2.7 2 1 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF56568 - 0.00028 20.5 9.1 0.00085 19.0 9.1 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF56568 - 0.00083 19.4 3.6 0.00083 19.4 3.6 2.4 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF56568 - 0.0014 18.6 8.7 0.0014 18.6 8.7 3.4 2 1 0 2 2 1 1 zinc-RING finger domain zf-B_box PF00643.24 ORF56568 - 0.0018 18.4 12.8 0.0018 18.4 12.8 3.3 3 0 0 3 3 3 1 B-box zinc finger zf-C3HC4 PF00097.25 ORF56568 - 0.0019 18.0 10.8 0.0019 18.0 10.8 3.1 2 1 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF56568 - 0.003 17.5 6.0 0.003 17.5 6.0 2.6 2 1 0 2 2 2 1 RING-type zinc-finger zf-RING_10 PF16685.5 ORF56568 - 0.0034 17.5 4.3 0.0034 17.5 4.3 3.1 3 1 0 3 3 1 1 zinc RING finger of MSL2 PHD PF00628.29 ORF56568 - 0.014 15.3 8.2 0.014 15.3 8.2 3.0 2 1 0 2 2 2 0 PHD-finger C1_2 PF03107.16 ORF56568 - 0.02 15.2 2.8 0.02 15.2 2.8 3.4 3 1 0 3 3 3 0 C1 domain zf-C3HC4_3 PF13920.6 ORF56568 - 0.027 14.3 8.3 0.027 14.3 8.3 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 ORF56568 - 0.045 13.6 6.0 0.13 12.1 6.0 1.8 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Elongin_A PF06881.11 ORF56568 - 0.1 13.1 3.1 3.3 8.3 0.3 2.4 2 0 0 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A IQ PF00612.27 ORF55669 - 0.019 14.7 1.3 0.048 13.5 1.3 1.7 1 0 0 1 1 1 0 IQ calmodulin-binding motif DUF4404 PF14357.6 ORF55109 - 0.027 15.1 1.0 0.064 13.9 1.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) PPR_2 PF13041.6 ORF53871 - 5.5e-08 32.9 0.4 0.0091 16.2 0.1 3.4 3 0 0 3 3 3 3 PPR repeat family PPR_3 PF13812.6 ORF53871 - 0.00051 20.1 0.0 0.1 12.7 0.0 2.6 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 ORF53871 - 0.0059 16.8 0.8 27 5.3 0.1 3.8 4 0 0 4 4 4 1 PPR repeat Mito_carr PF00153.27 ORF5096 - 3.2e-68 225.7 3.2 2e-23 82.1 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein AA_kinase PF00696.28 ORF50911 - 2.7e-33 115.6 0.0 4.6e-33 114.8 0.0 1.4 1 0 0 1 1 1 1 Amino acid kinase family ACT PF01842.25 ORF50911 - 7.5e-09 35.2 0.0 1.3e-06 28.0 0.0 2.6 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 ORF50911 - 6e-07 29.2 0.0 0.023 14.5 0.0 2.6 2 0 0 2 2 2 2 ACT domain zf-CCCH PF00642.24 ORF49887 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF49887 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF49887 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF49887 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger Lig_chan PF00060.26 ORF49692 - 0.014 15.2 7.1 1.8 8.4 3.5 2.4 2 0 0 2 2 2 0 Ligand-gated ion channel Tmemb_9 PF05434.11 ORF49692 - 0.018 14.9 0.3 0.16 11.8 0.0 2.4 2 0 0 2 2 2 0 TMEM9 Myelin_PLP PF01275.19 ORF49692 - 0.046 13.6 0.6 0.046 13.6 0.6 3.0 2 1 1 3 3 3 0 Myelin proteolipid protein (PLP or lipophilin) SARAF PF06682.12 ORF49692 - 0.06 13.0 0.1 0.15 11.7 0.0 1.7 2 0 0 2 2 2 0 SOCE-associated regulatory factor of calcium homoeostasis WBP-1 PF11669.8 ORF49692 - 0.22 12.2 0.2 0.22 12.2 0.2 2.4 2 0 0 2 2 2 0 WW domain-binding protein 1 DUF4834 PF16118.5 ORF49692 - 0.37 11.8 0.1 0.37 11.8 0.1 2.9 4 1 0 4 4 4 0 Domain of unknown function (DUF4834) DUF2730 PF10805.8 ORF49692 - 0.66 10.1 2.9 16 5.6 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) NnrU PF07298.11 ORF49692 - 2.4 7.6 10.4 4.6 6.7 1.8 2.3 2 0 0 2 2 2 0 NnrU protein CcmD PF04995.14 ORF49692 - 7.2 6.8 7.8 6.6 6.9 0.0 3.4 3 0 0 3 3 3 0 Heme exporter protein D (CcmD) Gpr1_Fun34_YaaH PF01184.19 ORF49692 - 7.6 6.1 14.9 0.1 12.2 6.6 1.9 2 0 0 2 2 2 0 GPR1/FUN34/yaaH family D-ser_dehydrat PF14031.6 ORF47449 - 0.075 13.7 0.0 0.13 12.9 0.0 1.4 1 0 0 1 1 1 0 Putative serine dehydratase domain DHHC PF01529.20 ORF46409 - 7.7 6.6 29.9 3.4 7.8 13.0 2.9 1 1 2 3 3 3 0 DHHC palmitoyltransferase Aldo_ket_red PF00248.21 ORF45524 - 1.8e-52 178.4 0.1 2.8e-52 177.7 0.1 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family Pkinase PF00069.25 ORF43905 - 2.2e-36 125.6 0.0 2.9e-36 125.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF43905 - 4.2e-20 72.1 0.0 7e-20 71.4 0.0 1.5 1 1 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 ORF43905 - 0.051 13.2 0.0 0.36 10.4 0.0 2.0 2 0 0 2 2 2 0 RIO1 family Kdo PF06293.14 ORF43905 - 0.17 11.2 0.0 0.36 10.2 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family MORN PF02493.20 ORF43423 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF43423 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain DUF5527 PF17665.1 ORF42697 - 0.97 9.0 3.6 15 5.1 2.1 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5527) DUF2207 PF09972.9 ORF42697 - 1.5 7.5 9.9 20 3.8 9.9 2.2 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Tmemb_9 PF05434.11 ORF42697 - 2.8 7.8 5.3 2.3 8.1 0.2 2.4 2 0 0 2 2 2 0 TMEM9 Pkinase PF00069.25 ORF4221 - 2.2e-52 178.0 0.1 2.6e-52 177.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF4221 - 1e-18 67.6 0.0 1.3e-18 67.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF4221 - 2.8e-05 23.6 0.0 8.7e-05 22.0 0.0 1.8 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 ORF4221 - 0.0013 18.2 0.0 0.0019 17.6 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF4221 - 0.0018 17.9 1.6 0.0043 16.7 0.7 1.9 1 1 0 2 2 2 1 Choline/ethanolamine kinase Haspin_kinase PF12330.8 ORF4221 - 0.016 14.2 0.1 0.025 13.6 0.1 1.2 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 ORF4221 - 0.018 14.9 0.0 0.028 14.3 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family JmjC PF02373.22 ORF38041 - 1.6e-37 128.4 0.3 3.1e-37 127.5 0.3 1.5 1 0 0 1 1 1 1 JmjC domain, hydroxylase zf-C5HC2 PF02928.16 ORF38041 - 2e-08 34.5 14.4 4.3e-08 33.4 14.4 1.6 1 0 0 1 1 1 1 C5HC2 zinc finger UCH PF00443.29 ORF37216 - 7.2e-27 94.5 7.7 8.9e-27 94.2 7.7 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF37216 - 4.2e-08 33.2 6.4 9.3e-08 32.0 6.4 1.5 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase CRT-like PF08627.10 ORF37216 - 0.094 11.7 0.4 0.2 10.6 0.4 1.5 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like DUF4404 PF14357.6 ORF35785 - 0.027 15.1 1.0 0.064 13.9 1.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) Asp_Arg_Hydrox PF05118.15 ORF32643 - 5.4e-24 84.8 0.0 1.1e-23 83.9 0.0 1.5 2 0 0 2 2 2 1 Aspartyl/Asparaginyl beta-hydroxylase TTL PF03133.15 ORF32272 - 8.8e-11 41.5 0.0 1.3e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF32272 - 1.5e-05 24.4 0.0 2.6e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF32272 - 0.0071 15.6 0.0 0.011 15.0 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp RimK PF08443.11 ORF32272 - 0.059 13.0 0.0 0.088 12.4 0.0 1.2 1 0 0 1 1 1 0 RimK-like ATP-grasp domain MORN PF02493.20 ORF29630 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF29630 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain UCH PF00443.29 ORF25462 - 7.2e-27 94.5 7.7 8.9e-27 94.2 7.7 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF25462 - 4.2e-08 33.2 6.4 9.3e-08 32.0 6.4 1.5 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase CRT-like PF08627.10 ORF25462 - 0.094 11.7 0.4 0.2 10.6 0.4 1.5 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like UCH PF00443.29 ORF25398 - 7.2e-27 94.5 7.7 8.9e-27 94.2 7.7 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF25398 - 4.2e-08 33.2 6.4 9.3e-08 32.0 6.4 1.5 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase CRT-like PF08627.10 ORF25398 - 0.094 11.7 0.4 0.2 10.6 0.4 1.5 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like MORN PF02493.20 ORF24385 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF24385 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain DUF4404 PF14357.6 ORF24377 - 0.027 15.1 1.0 0.064 13.9 1.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) UCH PF00443.29 ORF20332 - 7.2e-27 94.5 7.7 8.9e-27 94.2 7.7 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF20332 - 4.2e-08 33.2 6.4 9.3e-08 32.0 6.4 1.5 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase CRT-like PF08627.10 ORF20332 - 0.094 11.7 0.4 0.2 10.6 0.4 1.5 1 0 0 1 1 1 0 CRT-like, chloroquine-resistance transporter-like MORN PF02493.20 ORF20116 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF20116 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain TRAPPC9-Trs120 PF08626.11 ORF19159 - 3.6 4.8 4.6 4.5 4.5 4.6 1.1 1 0 0 1 1 1 0 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit Gamma_PGA_hydro PF05908.11 ORF18456 - 0.1 12.0 0.2 0.1 12.0 0.2 1.9 2 0 0 2 2 2 0 Poly-gamma-glutamate hydrolase MORN PF02493.20 ORF152784 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF152784 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain cobW PF02492.19 ORF1497 - 6.9e-09 35.5 0.0 9.9e-09 35.0 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 ORF1497 - 0.0044 16.9 0.0 0.0085 16.0 0.0 1.6 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain DUF2946 PF11162.8 ORF1497 - 0.29 11.8 5.0 1.1 9.9 5.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) zf-CCCH PF00642.24 ORF148066 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF148066 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF148066 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF148066 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger zf-CCCH PF00642.24 ORF145682 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF145682 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF145682 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF145682 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger IU_nuc_hydro PF01156.19 ORF144576 - 1.9e-81 274.0 0.1 2.2e-81 273.8 0.1 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase Esterase_phd PF10503.9 ORF143634 - 3.3e-06 26.7 0.0 5.4e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 Esterase PHB depolymerase Imm25 PF15564.6 ORF143634 - 0.064 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Immunity protein 25 Thioredoxin_3 PF13192.6 ORF143547 - 0.041 13.9 0.6 0.14 12.2 0.6 2.0 1 0 0 1 1 1 0 Thioredoxin domain MORN PF02493.20 ORF142957 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF142957 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain MORN PF02493.20 ORF142798 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF142798 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain DUF4834 PF16118.5 ORF13938 - 0.0071 17.3 0.0 0.0071 17.3 0.0 1.9 3 0 0 3 3 2 1 Domain of unknown function (DUF4834) SCIMP PF15050.6 ORF13938 - 0.015 15.8 0.1 0.038 14.5 0.1 1.7 1 0 0 1 1 1 0 SCIMP protein TMIE PF16038.5 ORF13938 - 0.018 14.8 0.0 0.041 13.7 0.0 1.6 1 0 0 1 1 1 0 TMIE protein ABC_membrane PF00664.23 ORF13938 - 0.026 14.2 0.1 0.04 13.6 0.1 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region EGF PF00008.27 ORF13938 - 0.027 14.8 12.7 0.077 13.3 12.7 1.8 1 0 0 1 1 1 0 EGF-like domain hEGF PF12661.7 ORF13938 - 0.033 14.8 8.8 0.033 14.8 8.8 2.3 2 0 0 2 2 1 0 Human growth factor-like EGF TMEM52 PF14979.6 ORF13938 - 0.036 14.0 1.3 0.057 13.3 0.0 1.8 2 0 0 2 2 2 0 Transmembrane 52 SIT PF15330.6 ORF13938 - 0.041 14.3 0.0 0.23 11.9 0.0 2.1 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT DUF3328 PF11807.8 ORF13938 - 0.046 13.5 0.0 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3328) EphA2_TM PF14575.6 ORF13938 - 0.052 14.4 0.0 0.31 11.9 0.0 2.1 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain TMEM154 PF15102.6 ORF13938 - 0.062 13.2 0.1 0.15 12.0 0.1 1.6 1 0 0 1 1 1 0 TMEM154 protein family DUF5385 PF17359.2 ORF13938 - 0.1 12.1 0.4 0.21 11.1 0.4 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5385) FixP_N PF14715.6 ORF13938 - 0.11 12.2 0.3 0.21 11.3 0.3 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP DUF1179 PF06678.11 ORF13938 - 0.22 11.5 1.0 0.38 10.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1179) EGF_Tenascin PF18720.1 ORF13938 - 0.29 11.2 12.7 0.046 13.8 8.7 1.8 2 0 0 2 2 1 0 Tenascin EGF domain ODV-E18 PF10717.9 ORF13938 - 0.72 9.8 2.3 1.8 8.5 2.3 1.6 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 EGF_2 PF07974.13 ORF13938 - 4.5 7.7 24.9 0.067 13.6 16.6 2.3 3 0 0 3 3 3 0 EGF-like domain EB PF01683.18 ORF13938 - 5.8 7.3 11.6 1.5 9.1 7.7 2.1 3 0 0 3 3 2 0 EB module Chloroa_b-bind PF00504.21 ORF137500 - 3.6e-45 154.4 1.0 6.1e-29 101.6 0.5 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein AMP-binding PF00501.28 ORF137372 - 1.1e-24 86.8 0.0 1.5e-24 86.4 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF137372 - 1.3e-16 61.3 0.0 2.3e-16 60.5 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Kri1_C PF12936.7 ORF136092 - 6.2e-21 74.4 0.0 1.4e-20 73.3 0.0 1.5 1 0 0 1 1 1 1 KRI1-like family C-terminal ZZ PF00569.17 ORF136092 - 0.00017 21.3 6.0 0.00025 20.8 5.2 1.7 2 0 0 2 2 2 1 Zinc finger, ZZ type C1_2 PF03107.16 ORF136092 - 0.0017 18.6 4.4 0.0036 17.6 4.4 1.5 1 0 0 1 1 1 1 C1 domain FYVE PF01363.21 ORF136092 - 0.081 13.1 3.7 0.15 12.2 3.7 1.4 1 0 0 1 1 1 0 FYVE zinc finger FXMRP1_C_core PF12235.8 ORF136092 - 0.42 11.3 11.9 0.79 10.4 11.9 1.4 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal Stomagen PF16851.5 ORF135957 - 0.011 15.7 0.3 0.026 14.5 0.3 1.6 1 0 0 1 1 1 0 Stomagen zf-CCCH PF00642.24 ORF131864 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF131864 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF131864 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF131864 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger Porin_3 PF01459.22 ORF131450 - 2.4e-13 50.2 4.9 2.8e-13 49.9 4.9 1.1 1 0 0 1 1 1 1 Eukaryotic porin zf-CCCH PF00642.24 ORF127522 - 7.1e-12 44.9 18.3 5.3e-08 32.6 3.1 3.3 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 ORF127522 - 0.018 15.5 15.0 0.72 10.4 5.7 3.1 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf_CCCH_4 PF18345.1 ORF127522 - 0.025 14.6 4.7 0.025 14.6 4.7 5.3 4 1 1 5 5 5 0 Zinc finger domain zf-CCCH_4 PF18044.1 ORF127522 - 0.062 13.1 21.8 0.085 12.7 2.5 3.2 3 1 0 3 3 3 0 CCCH-type zinc finger Flavokinase PF01687.17 ORF126846 - 1e-29 103.1 0.0 1.9e-29 102.2 0.0 1.4 1 0 0 1 1 1 1 Riboflavin kinase PA14 PF07691.12 ORF12632 - 1.3e-11 44.5 0.8 2.6e-11 43.5 0.8 1.5 1 0 0 1 1 1 1 PA14 domain DUF4215 PF13948.6 ORF12632 - 1.7e-08 34.7 11.2 1.7e-08 34.7 11.2 3.8 4 0 0 4 4 4 1 Domain of unknown function (DUF4215) GLEYA PF10528.9 ORF12632 - 0.0053 17.2 0.8 0.019 15.4 0.6 2.1 1 1 0 1 1 1 1 GLEYA domain DUF4361 PF14274.6 ORF12632 - 0.006 16.9 3.1 0.0098 16.2 3.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4361) MFS_1 PF07690.16 ORF12320 - 0.042 12.8 36.3 0.8 8.6 36.3 2.1 1 1 0 1 1 1 0 Major Facilitator Superfamily UPF0182 PF03699.13 ORF12320 - 0.28 9.2 1.2 0.55 8.3 1.2 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0182) DUF4404 PF14357.6 ORF121497 - 0.027 15.1 1.0 0.064 13.9 1.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) Methyltransf_11 PF08241.12 ORF121031 - 7.4e-12 45.8 0.0 8.7e-11 42.3 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF121031 - 6.9e-11 41.9 0.2 2.5e-07 30.3 0.1 2.9 1 1 1 2 2 2 2 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 ORF121031 - 3.4e-10 40.5 0.0 4e-05 24.2 0.0 2.6 1 1 1 2 2 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 ORF121031 - 1.6e-07 31.3 0.0 2.2e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF121031 - 9.6e-05 22.2 0.1 0.0031 17.3 0.1 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF121031 - 0.00029 21.5 0.0 0.001 19.8 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 ORF121031 - 0.03 14.2 0.1 0.064 13.1 0.0 1.8 2 0 0 2 2 2 0 Hypothetical methyltransferase Methyltransf_16 PF10294.9 ORF121031 - 0.031 14.0 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase PCMT PF01135.19 ORF121031 - 0.18 11.5 0.0 0.49 10.1 0.0 1.7 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Hydrolase_4 PF12146.8 ORF120035 - 2.8e-16 59.5 0.0 6.9e-11 41.9 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 AXE1 PF05448.12 ORF120035 - 3.8e-13 48.8 0.3 3.3e-05 22.7 0.1 3.2 2 1 1 3 3 3 3 Acetyl xylan esterase (AXE1) Abhydrolase_1 PF00561.20 ORF120035 - 1.1e-08 35.1 0.1 5.4e-05 23.0 0.0 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 ORF120035 - 3.1e-07 30.4 1.3 0.0014 18.5 0.0 3.2 2 1 1 3 3 3 2 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 ORF120035 - 0.0002 21.3 0.0 0.0004 20.3 0.0 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 ORF120035 - 0.0003 20.4 0.0 0.37 10.3 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family Abhydrolase_5 PF12695.7 ORF120035 - 0.00038 20.3 0.0 0.19 11.5 0.0 2.4 1 1 1 2 2 2 2 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 ORF120035 - 0.0006 19.4 0.0 0.0012 18.4 0.0 1.6 1 1 0 1 1 1 1 Prolyl oligopeptidase family FSH1 PF03959.13 ORF120035 - 0.00061 19.5 0.0 0.0017 18.1 0.0 1.7 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_6 PF12697.7 ORF120035 - 0.011 16.4 0.0 0.014 16.0 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Lipase_3 PF01764.25 ORF120035 - 0.022 14.6 0.0 0.11 12.4 0.0 1.9 2 0 0 2 2 2 0 Lipase (class 3) BslA PF17735.1 ORF119682 - 0.17 11.9 0.0 0.28 11.2 0.0 1.3 1 0 0 1 1 1 0 Biofilm surface layer A MORN PF02493.20 ORF114517 - 6.2e-62 201.9 62.6 5.6e-08 32.2 0.6 10.3 10 0 0 10 10 10 10 MORN repeat ID PF18543.1 ORF114517 - 0.86 9.7 9.4 65 3.7 0.0 5.6 6 0 0 6 6 6 0 Intracellular delivery domain DnaJ PF00226.31 ORF108184 - 1.1e-26 92.7 3.9 1.1e-26 92.7 3.9 2.4 2 0 0 2 2 2 1 DnaJ domain WW PF00397.26 NODE_22439_length_908_cov_207.709049_g17348_i0reverse_frame_1 - 3.7e-10 39.7 0.0 7.3e-10 38.8 0.0 1.5 1 0 0 1 1 1 1 WW domain Ribosomal_L40e PF01020.17 NODE_22413_length_909_cov_111.647597_g17325_i0forward_frame_1 - 0.01 15.7 1.4 0.037 13.9 1.4 2.0 1 0 0 1 1 1 0 Ribosomal L40e family CENP-F_leu_zip PF10473.9 ORF88946 - 0.0023 17.9 4.5 0.0048 16.9 4.5 1.5 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DivIVA PF05103.13 ORF88946 - 0.018 15.1 3.7 0.033 14.3 3.7 1.4 1 0 0 1 1 1 0 DivIVA protein DUF2205 PF10224.9 ORF88946 - 0.029 14.4 2.5 0.07 13.1 2.5 1.7 1 0 0 1 1 1 0 Short coiled-coil protein YabA PF06156.13 ORF88946 - 0.057 14.1 5.7 0.15 12.7 5.7 1.7 1 0 0 1 1 1 0 Initiation control protein YabA DUF948 PF06103.11 ORF88946 - 0.1 12.9 1.1 1 9.6 2.6 1.9 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF4795 PF16043.5 ORF88946 - 0.16 11.5 5.2 0.57 9.7 3.8 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) ZapB PF06005.12 ORF88946 - 0.28 11.6 6.8 0.15 12.6 4.1 1.9 2 0 0 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 ORF88946 - 0.3 10.9 2.1 0.61 9.9 2.1 1.5 1 0 0 1 1 1 0 Septum formation initiator DUF3450 PF11932.8 ORF88946 - 0.31 10.3 2.5 0.52 9.6 2.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Ehrlichia_rpt PF09528.10 ORF88946 - 1.3 8.5 3.5 2.7 7.5 3.5 1.4 1 0 0 1 1 1 0 Ehrlichia tandem repeat (Ehrlichia_rpt) VASP_tetra PF08776.11 ORF88121 - 0.34 10.5 4.1 0.9 9.2 4.1 1.7 1 0 0 1 1 1 0 VASP tetramerisation domain Borrelia_P83 PF05262.11 ORF88121 - 0.64 8.4 6.3 0.87 8.0 6.3 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Cep57_CLD_2 PF14197.6 ORF86853 - 0.33 11.1 5.8 0.68 10.1 0.1 3.0 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 MutS_III PF05192.18 ORF86853 - 1.1 9.4 4.1 2 8.6 4.1 1.4 1 0 0 1 1 1 0 MutS domain III ERM PF00769.19 ORF85796 - 0.0026 17.6 36.7 0.0026 17.6 36.7 2.4 1 1 1 2 2 2 1 Ezrin/radixin/moesin family Spc7 PF08317.11 ORF85796 - 0.0031 16.4 19.7 0.0031 16.4 19.7 2.5 2 1 0 2 2 2 1 Spc7 kinetochore protein DPM3 PF08285.11 ORF85796 - 0.85 9.9 2.2 3.3 8.0 2.2 2.0 1 0 0 1 1 1 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) HsbA PF12296.8 ORF85796 - 1.1 9.6 3.8 19 5.7 0.0 2.8 2 1 1 3 3 3 0 Hydrophobic surface binding protein A CorA PF01544.18 ORF85796 - 2 7.7 13.1 3.7 6.8 2.3 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DUF948 PF06103.11 ORF85796 - 8.4 6.7 10.8 3.7 7.9 1.9 3.3 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) ubiquitin PF00240.23 ORF84893 - 5.7e-05 22.8 0.0 0.0001 22.0 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF84893 - 0.046 14.2 0.0 0.18 12.3 0.0 2.0 3 0 0 3 3 3 0 Ubiquitin-like domain YukD PF08817.10 ORF84893 - 0.32 11.7 1.4 3.8 8.3 0.1 3.0 4 0 0 4 4 4 0 WXG100 protein secretion system (Wss), protein YukD EGF PF00008.27 ORF81695 - 0.0024 18.1 12.2 0.0065 16.8 12.2 1.8 1 0 0 1 1 1 1 EGF-like domain DUF4834 PF16118.5 ORF81695 - 0.0071 17.3 0.0 0.0071 17.3 0.0 1.7 2 0 0 2 2 1 1 Domain of unknown function (DUF4834) TMIE PF16038.5 ORF81695 - 0.018 14.8 0.0 0.041 13.7 0.0 1.6 1 0 0 1 1 1 0 TMIE protein SCIMP PF15050.6 ORF81695 - 0.019 15.4 0.1 0.038 14.5 0.1 1.5 1 0 0 1 1 1 0 SCIMP protein ABC_membrane PF00664.23 ORF81695 - 0.025 14.2 0.1 0.04 13.6 0.1 1.2 1 0 0 1 1 1 0 ABC transporter transmembrane region TMEM52 PF14979.6 ORF81695 - 0.033 14.1 1.3 0.057 13.3 0.0 1.9 2 0 0 2 2 2 0 Transmembrane 52 SIT PF15330.6 ORF81695 - 0.045 14.2 0.1 0.23 11.9 0.0 2.0 2 0 0 2 2 2 0 SHP2-interacting transmembrane adaptor protein, SIT hEGF PF12661.7 ORF81695 - 0.047 14.3 6.9 0.047 14.3 6.9 2.2 2 0 0 2 2 1 0 Human growth factor-like EGF DUF3328 PF11807.8 ORF81695 - 0.048 13.4 0.0 0.14 11.9 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3328) EphA2_TM PF14575.6 ORF81695 - 0.056 14.3 0.0 0.31 11.9 0.0 2.0 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain TMEM154 PF15102.6 ORF81695 - 0.064 13.2 0.1 0.15 12.0 0.1 1.6 1 0 0 1 1 1 0 TMEM154 protein family FixP_N PF14715.6 ORF81695 - 0.11 12.2 0.3 0.21 11.3 0.3 1.4 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP DUF5385 PF17359.2 ORF81695 - 0.13 11.8 0.4 0.21 11.1 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5385) DUF1179 PF06678.11 ORF81695 - 0.2 11.7 0.9 0.37 10.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1179) EGF_Tenascin PF18720.1 ORF81695 - 0.23 11.5 7.8 0.48 10.5 7.8 1.6 1 0 0 1 1 1 0 Tenascin EGF domain DUF3139 PF11337.8 ORF81695 - 0.41 11.3 2.1 1 10.0 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) ODV-E18 PF10717.9 ORF81695 - 0.69 9.8 2.3 1.8 8.5 2.3 1.6 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein ODV-E18 Peptidase_C1 PF00112.23 ORF81208 - 4.1e-56 190.5 9.4 5.4e-56 190.1 9.4 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 ORF81208 - 5.6e-08 33.1 1.3 5.6e-08 33.1 1.3 1.9 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) GTP_EFTU_D3 PF03143.17 ORF79970 - 6.9e-34 116.5 0.0 1.2e-33 115.7 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU PF00009.27 ORF79970 - 4e-23 82.0 0.0 5.8e-23 81.5 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 ORF79970 - 3.1e-18 65.9 6.7 4.6e-18 65.4 6.0 1.7 2 0 0 2 2 2 1 Elongation factor Tu domain 2 cobW PF02492.19 ORF79970 - 0.1 12.2 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain WD40 PF00400.32 ORF72536 - 1.1e-18 67.2 0.5 2.1e-06 28.4 0.0 4.6 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF72536 - 3.4e-07 30.5 0.0 0.00032 20.9 0.0 3.6 2 2 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain eIF-3c_N PF05470.12 ORF72536 - 0.021 13.1 0.3 0.028 12.8 0.3 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus BBS2_Mid PF14783.6 ORF72536 - 0.11 12.5 0.0 18 5.4 0.0 3.2 3 0 0 3 3 3 0 Ciliary BBSome complex subunit 2, middle region Aa_trans PF01490.18 ORF69988 - 1.9e-43 148.7 5.0 2.3e-43 148.5 5.0 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Bac_rhodopsin PF01036.18 ORF69988 - 0.019 14.5 0.3 0.019 14.5 0.3 1.7 2 0 0 2 2 2 0 Bacteriorhodopsin-like protein zf-U11-48K PF05253.12 ORF66293 - 0.0018 18.2 6.0 0.0024 17.7 0.4 2.5 2 0 0 2 2 2 2 U11-48K-like CHHC zinc finger Sigma_reg_N PF13800.6 ORF60530 - 0.00042 20.5 5.8 0.76 10.1 0.3 3.3 3 0 0 3 3 3 2 Sigma factor regulator N-terminal PGG PF13962.6 ORF60530 - 0.0066 16.3 0.5 0.16 11.8 0.0 2.2 2 0 0 2 2 2 1 Domain of unknown function Comm PF15957.5 ORF60530 - 0.011 16.0 0.4 2 8.8 0.7 2.5 2 0 0 2 2 2 0 Commissureless DUF2207 PF09972.9 ORF60530 - 0.037 12.8 0.9 0.087 11.6 0.9 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Cyt_bd_oxida_II PF02322.15 ORF60530 - 0.039 13.3 1.7 1.3 8.3 0.0 2.3 2 1 0 2 2 2 0 Cytochrome bd terminal oxidase subunit II Glucos_trans_II PF14264.6 ORF60530 - 0.086 12.2 10.3 1.3 8.3 1.3 2.3 2 1 0 2 2 2 0 Glucosyl transferase GtrII Shisa PF13908.6 ORF60530 - 0.093 13.0 0.1 0.093 13.0 0.1 3.3 3 1 0 4 4 4 0 Wnt and FGF inhibitory regulator DUF1129 PF06570.11 ORF60530 - 0.29 10.6 0.0 0.29 10.6 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1129) DUF1600 PF07667.11 ORF60530 - 1.7 8.9 11.4 3.6 7.8 2.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF1600) RSN1_TM PF13967.6 ORF60530 - 2.2 8.0 6.4 2 8.1 0.3 2.8 3 0 0 3 3 3 0 Late exocytosis, associated with Golgi transport DUF4834 PF16118.5 ORF60530 - 2.3 9.2 0.0 2.3 9.2 0.0 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) SdpI PF13630.6 ORF60530 - 4.6 7.5 0.0 4.6 7.5 0.0 3.0 3 0 0 3 3 3 0 SdpI/YhfL protein family PepSY_TM_like_2 PF16357.5 ORF60530 - 7 6.6 11.9 8.4 6.3 0.8 3.5 2 1 2 4 4 4 0 Putative PepSY_TM-like zf-C3HC4_2 PF13923.6 ORF55831 - 2.6e-09 36.8 10.7 2.6e-09 36.8 10.7 3.3 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF55831 - 6.6e-09 35.5 11.1 6.6e-09 35.5 11.1 3.4 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF55831 - 2.4e-08 33.9 7.5 2.4e-08 33.9 7.5 3.5 3 1 1 4 4 4 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF55831 - 4.3e-08 32.9 8.6 4.3e-08 32.9 8.6 3.2 4 0 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF55831 - 3.1e-07 30.6 10.9 3.1e-07 30.6 10.9 3.7 3 1 1 4 4 4 1 Ring finger domain Prok-RING_4 PF14447.6 ORF55831 - 4.7e-06 26.4 8.4 4.7e-06 26.4 8.4 2.6 3 0 0 3 3 2 1 Prokaryotic RING finger family 4 zf-CRD PF17979.1 ORF55831 - 1e-05 25.7 2.0 1e-05 25.7 2.0 2.7 1 1 1 2 2 2 1 Cysteine rich domain with multizinc binding regions zf-RING_5 PF14634.6 ORF55831 - 1.2e-05 25.1 8.6 1.2e-05 25.1 8.6 3.2 4 0 0 4 4 3 1 zinc-RING finger domain zf-RING_6 PF14835.6 ORF55831 - 0.00018 21.3 2.3 0.00018 21.3 2.3 2.2 3 0 0 3 3 2 1 zf-RING of BARD1-type protein zf-RING_10 PF16685.5 ORF55831 - 0.001 19.1 8.3 0.001 19.1 8.3 3.3 3 1 0 3 3 3 1 zinc RING finger of MSL2 zf-rbx1 PF12678.7 ORF55831 - 0.0023 18.2 6.9 0.0023 18.2 6.9 3.3 3 0 0 3 3 3 1 RING-H2 zinc finger domain DUF1258 PF06869.12 ORF55831 - 0.0042 16.6 0.2 0.0071 15.9 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1258) zf-C3HC4_4 PF15227.6 ORF55831 - 0.011 15.8 12.0 0.011 15.8 12.0 3.1 3 0 0 3 3 3 0 zinc finger of C3HC4-type, RING MqsA_antitoxin PF15731.5 ORF55831 - 0.029 14.5 0.6 0.069 13.2 0.6 1.6 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA zf-Nse PF11789.8 ORF55831 - 0.12 12.2 4.9 0.31 10.9 4.9 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zinc_ribbon_9 PF14369.6 ORF55831 - 2.2 8.6 15.5 1.1 9.6 2.0 3.4 3 0 0 3 3 3 0 zinc-ribbon zf-ribbon_3 PF13248.6 ORF55831 - 8.6 5.9 14.8 10 5.7 0.3 4.1 4 0 0 4 4 4 0 zinc-ribbon domain Peptidase_S9 PF00326.21 ORF44348 - 4.2e-48 163.6 0.0 5e-48 163.4 0.0 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 ORF44348 - 5e-11 42.6 0.2 1.4e-10 41.2 0.1 1.6 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 ORF44348 - 2.6e-10 40.0 0.0 7e-06 25.5 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S15 PF02129.18 ORF44348 - 1.1e-06 28.4 0.2 0.071 12.7 0.0 2.1 1 1 0 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) AXE1 PF05448.12 ORF44348 - 0.00034 19.4 0.2 1.6 7.4 0.0 3.0 3 0 0 3 3 3 2 Acetyl xylan esterase (AXE1) Abhydrolase_3 PF07859.13 ORF44348 - 0.0014 18.5 0.1 0.018 14.9 0.1 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF44348 - 0.007 16.5 0.0 0.041 14.0 0.0 2.0 2 0 0 2 2 2 1 TAP-like protein Abhydrolase_1 PF00561.20 ORF44348 - 0.0094 15.6 0.0 0.077 12.6 0.0 1.9 1 1 1 2 2 2 1 alpha/beta hydrolase fold FSH1 PF03959.13 ORF44348 - 0.019 14.7 0.0 0.028 14.1 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) PhoPQ_related PF10142.9 ORF44348 - 0.044 12.4 0.0 0.054 12.1 0.0 1.1 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein DUF829 PF05705.14 ORF44348 - 0.063 13.2 0.0 0.096 12.6 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF829) Abhydrolase_2 PF02230.16 ORF44348 - 0.24 11.2 0.0 0.46 10.3 0.0 1.4 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase PAE PF03283.13 ORF44348 - 0.27 10.3 0.1 0.49 9.5 0.1 1.3 1 0 0 1 1 1 0 Pectinacetylesterase Radical_SAM PF04055.21 ORF38494 - 7.2e-15 55.8 0.0 1.1e-14 55.2 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily LIAS_N PF16881.5 ORF38494 - 1.5e-07 31.8 0.1 1.4e-06 28.7 0.1 2.1 2 0 0 2 2 2 1 N-terminal domain of lipoyl synthase of Radical_SAM family Vps23_core PF09454.10 ORF35503 - 3e-11 43.1 0.2 5.7e-11 42.2 0.2 1.5 1 0 0 1 1 1 1 Vps23 core domain DUF484 PF04340.12 ORF28346 - 0.013 15.3 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF484 Sybindin PF04099.12 ORF28346 - 0.039 13.9 0.2 0.074 13.0 0.1 1.6 2 1 0 2 2 2 0 Sybindin-like family PHR PF08005.12 ORF23120 - 2.9e-11 44.2 2.9 2.9e-11 44.2 2.9 1.8 2 0 0 2 2 2 1 PHR domain Pkinase PF00069.25 ORF1889 - 3.2e-41 141.5 1.2 6e-41 140.6 1.2 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF1889 - 7e-39 133.7 0.1 1e-38 133.1 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF1889 - 3.9e-06 26.0 7.0 7.2e-05 21.9 7.0 2.3 1 1 0 1 1 1 1 Haspin like kinase domain FTA2 PF13095.6 ORF1889 - 0.038 13.6 6.1 0.2 11.2 0.1 2.8 1 1 1 3 3 3 0 Kinetochore Sim4 complex subunit FTA2 PIP49_C PF12260.8 ORF1889 - 0.042 13.5 0.0 0.042 13.5 0.0 2.2 3 0 0 3 3 3 0 Protein-kinase domain of FAM69 APH PF01636.23 ORF1889 - 0.073 13.0 0.0 0.14 12.1 0.0 1.4 1 1 0 1 1 1 0 Phosphotransferase enzyme family DUF848 PF05852.11 ORF1889 - 0.82 9.8 5.0 16 5.6 0.0 3.1 2 1 1 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) DUF1295 PF06966.12 ORF152480 - 2.8e-62 210.3 7.5 3.3e-62 210.1 7.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF152480 - 7e-09 36.0 0.2 7e-09 36.0 0.2 2.3 2 1 0 2 2 2 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF152480 - 1.1e-08 35.2 6.1 1.3e-08 35.0 5.1 1.7 2 0 0 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase ERG4_ERG24 PF01222.17 ORF152480 - 1.5e-05 23.9 2.5 2.6e-05 23.2 2.5 1.3 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family ICMT PF04140.14 ORF152480 - 2e-05 24.9 0.9 5e-05 23.6 0.2 2.1 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family MerC PF03203.14 ORF152480 - 0.021 15.2 1.1 0.021 15.2 1.1 2.4 1 1 1 2 2 2 0 MerC mercury resistance protein NMO PF03060.15 ORF151243 - 4.1e-48 164.5 0.2 5.8e-48 164.0 0.2 1.2 1 1 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 ORF151243 - 1.8e-05 23.9 7.0 2.7e-05 23.3 7.0 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 ORF151243 - 0.43 9.5 8.6 0.81 8.6 8.6 1.4 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain PhyH PF05721.13 ORF150650 - 3.8e-09 37.1 0.0 8.4e-09 36.0 0.0 1.6 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) DUF1479 PF07350.12 ORF150650 - 0.14 10.8 0.0 3 6.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1479) Ribosomal_L3 PF00297.22 ORF148359 - 1.6e-118 395.9 1.2 1.8e-118 395.8 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Herpes_UL87 PF03043.14 ORF148359 - 0.0034 15.9 0.2 0.0045 15.5 0.2 1.1 1 0 0 1 1 1 1 Herpesvirus UL87 family TAN PF11640.8 ORF148359 - 0.039 14.1 1.0 0.065 13.4 1.0 1.3 1 0 0 1 1 1 0 Telomere-length maintenance and DNA damage repair eIF3_p135 PF12807.7 ORF144828 - 0.14 12.2 0.2 0.19 11.7 0.2 1.3 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit 135 Arrestin_N PF00339.29 ORF141128 - 4.6e-14 52.7 0.1 7.3e-14 52.1 0.1 1.3 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 ORF141128 - 0.029 14.1 0.0 0.051 13.3 0.0 1.4 1 0 0 1 1 1 0 Arrestin_N terminal like Pkinase PF00069.25 ORF140427 - 3.8e-51 174.0 0.0 5.2e-51 173.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF140427 - 3.2e-27 95.5 0.0 4.4e-27 95.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF140427 - 2.5e-06 27.0 0.0 7.4e-06 25.5 0.0 1.8 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF140427 - 1.2e-05 24.3 0.0 1.9e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF140427 - 5.2e-05 23.3 0.0 0.00024 21.1 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF140427 - 9.3e-05 21.5 0.5 0.00014 21.0 0.5 1.2 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 ORF140427 - 0.005 16.5 1.0 0.0083 15.7 0.1 1.7 2 0 0 2 2 2 1 RIO1 family Kdo PF06293.14 ORF140427 - 0.0066 15.8 0.1 0.013 14.9 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family CsoSCA PF08936.10 ORF140427 - 0.093 11.4 0.0 0.13 10.8 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase JmjN PF02375.17 ORF140427 - 0.16 11.9 0.7 0.75 9.8 0.4 2.3 3 0 0 3 3 3 0 jmjN domain SBF PF01758.16 ORF135461 - 0.054 13.2 0.1 0.084 12.5 0.1 1.3 1 0 0 1 1 1 0 Sodium Bile acid symporter family CBM9_1 PF06452.11 ORF132907 - 0.00054 19.9 0.0 0.0012 18.8 0.0 1.6 1 1 0 1 1 1 1 Carbohydrate family 9 binding domain-like Cupin_4 PF08007.12 ORF129029 - 0.0015 18.1 0.3 0.0082 15.6 0.3 2.0 1 1 0 1 1 1 1 Cupin superfamily protein Cupin_8 PF13621.6 ORF129029 - 0.022 14.5 3.9 0.094 12.4 3.9 1.9 1 1 0 1 1 1 0 Cupin-like domain Peripla_BP_2 PF01497.18 ORF127574 - 9.9e-30 103.8 0.3 1.2e-29 103.6 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Glyco_transf_25 PF01755.17 ORF126848 - 6.8e-12 45.7 0.0 1.1e-11 45.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) DUF1295 PF06966.12 ORF122201 - 1.2e-11 44.7 3.1 1.6e-11 44.2 3.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF122201 - 1.1e-06 28.8 4.5 2.6e-06 27.5 4.6 1.6 1 1 1 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase PEMT PF04191.13 ORF122201 - 2.6e-06 27.8 1.7 4.1e-06 27.1 0.2 2.1 2 0 0 2 2 2 1 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF122201 - 0.0082 14.9 3.3 0.015 14.1 3.3 1.4 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family PHO4 PF01384.20 ORF122201 - 0.045 12.8 0.6 0.05 12.6 0.6 1.2 1 0 0 1 1 1 0 Phosphate transporter family DUF4113 PF13438.6 ORF122201 - 0.75 9.9 4.4 46 4.2 0.1 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4113) tRNA-synt_2 PF00152.20 ORF120301 - 3.3e-45 154.5 0.0 5.7e-45 153.8 0.0 1.4 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) SRTM1 PF15872.5 ORF118132 - 0.0016 18.6 0.1 0.0016 18.6 0.1 1.9 2 0 0 2 2 2 1 Serine-rich and transmembrane domain-containing protein 1 TM_helix PF05552.12 ORF118132 - 0.81 9.7 7.1 0.17 11.9 0.7 2.4 2 0 0 2 2 2 0 Conserved TM helix Pkinase PF00069.25 ORF113034 - 4.7e-69 232.7 0.0 5.3e-69 232.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF113034 - 2.6e-29 102.3 0.0 3.2e-29 102.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF113034 - 0.00081 18.4 0.0 0.00098 18.2 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF113034 - 0.00096 18.6 0.1 0.0017 17.7 0.1 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF113034 - 0.0076 15.6 0.0 0.015 14.6 0.0 1.5 1 0 0 1 1 1 1 Kinase-like RIO1 PF01163.22 ORF113034 - 0.035 13.7 0.2 0.063 12.9 0.2 1.4 1 0 0 1 1 1 0 RIO1 family Mito_carr PF00153.27 ORF10917 - 1.3e-66 220.5 3.4 9.7e-26 89.5 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Spidroin_N PF16763.5 ORF107634 - 0.033 14.2 1.7 0.033 14.2 1.7 2.0 2 0 0 2 2 2 0 Major ampullate spidroin 1, spider silk protein 1, N-term Lectin_leg-like PF03388.13 ORF101682 - 3.7e-16 59.2 0.2 5.4e-16 58.6 0.2 1.3 1 0 0 1 1 1 1 Legume-like lectin family DUF5040 PF16443.5 NODE_22580_length_904_cov_108.116226_g17470_i0reverse_frame_1 - 0.06 12.7 2.7 1 8.7 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5040) Ank_2 PF12796.7 NODE_22566_length_904_cov_466.690449_g17457_i0reverse_frame_1 - 7.3e-43 145.1 0.0 1.2e-17 64.2 0.0 3.1 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_22566_length_904_cov_466.690449_g17457_i0reverse_frame_1 - 1.7e-29 101.8 9.8 2.7e-10 40.6 0.1 4.5 2 1 3 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_22566_length_904_cov_466.690449_g17457_i0reverse_frame_1 - 6.2e-22 77.4 5.7 1.1e-05 25.6 0.1 5.1 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_22566_length_904_cov_466.690449_g17457_i0reverse_frame_1 - 7.1e-20 69.0 2.0 3.4e-06 27.0 0.0 5.5 6 0 0 6 6 6 5 Ankyrin repeat Ank PF00023.30 NODE_22566_length_904_cov_466.690449_g17457_i0reverse_frame_1 - 4.4e-18 64.9 0.1 6.8e-05 23.1 0.0 4.7 5 0 0 5 5 5 4 Ankyrin repeat Regulator_TrmB PF11495.8 NODE_22533_length_905_cov_359.714943_g17427_i0forward_frame_1 - 0.0069 15.6 0.4 0.014 14.6 0.1 1.7 2 0 0 2 2 2 1 Archaeal transcriptional regulator TrmB Neugrin PF06413.11 NODE_22533_length_905_cov_359.714943_g17427_i0forward_frame_1 - 0.5 10.4 13.8 0.14 12.2 2.8 2.4 1 1 1 2 2 2 0 Neugrin Apolipoprotein PF01442.18 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 0.025 14.5 10.4 0.057 13.3 4.7 2.9 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 0.68 10.0 8.7 1.6 8.8 1.0 3.3 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF883 PF05957.13 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 0.81 10.3 9.6 4.8 7.9 0.3 3.7 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF883) Sec23_helical PF04815.15 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 1.1 9.1 5.6 0.7 9.7 0.6 2.9 2 1 1 3 3 3 0 Sec23/Sec24 helical domain WXG100 PF06013.12 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 2.1 8.6 10.7 20 5.5 0.1 3.9 3 2 1 4 4 4 0 Proteins of 100 residues with WXG Phage_lysozyme PF00959.19 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 2.8 8.4 12.0 1.8e+02 2.6 7.1 3.6 2 1 1 3 3 3 0 Phage lysozyme BST2 PF16716.5 NODE_22486_length_907_cov_57.883028_g11682_i1reverse_frame_3 - 4.3 8.0 33.4 0.09 13.4 3.4 4.4 3 1 0 4 4 4 0 Bone marrow stromal antigen 2 zf-H2C2_5 PF13909.6 NODE_22486_length_907_cov_57.883028_g11682_i1forward_frame_3 - 0.33 10.8 3.0 8.3 6.3 0.1 2.4 2 0 0 2 2 2 0 C2H2-type zinc-finger domain ChW PF07538.11 NODE_22439_length_908_cov_207.709049_g17348_i0reverse_frame_3 - 3.7 7.5 7.8 8.1 6.5 1.4 3.4 3 0 0 3 3 3 0 Clostridial hydrophobic W adh_short PF00106.25 ORF99388 - 9.3e-35 119.9 0.0 1.2e-34 119.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF99388 - 2.4e-20 73.1 0.0 3.2e-20 72.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF99388 - 6.4e-06 26.2 0.0 8.7e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF99388 - 0.074 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Rxt3 PF08642.10 ORF99199 - 4.6e-09 37.1 2.0 4.7e-07 30.6 0.0 3.0 2 1 1 3 3 3 2 Histone deacetylation protein Rxt3 LCCL PF03815.19 ORF99199 - 1.8e-05 24.8 0.1 3.1e-05 24.0 0.1 1.4 1 0 0 1 1 1 1 LCCL domain Mito_carr PF00153.27 ORF99141 - 1.4e-55 185.2 0.0 3.8e-22 78.0 0.1 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF4148 PF13663.6 ORF99141 - 8.6 6.6 8.5 1.3 9.2 3.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) LRRC37AB_C PF14914.6 ORF98019 - 2.4 8.1 6.1 0.22 11.5 0.9 1.9 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain IBR PF01485.21 ORF93609 - 1.7e-21 76.2 28.4 1.1e-13 51.2 11.1 5.0 4 1 1 5 5 5 2 IBR domain, a half RING-finger domain zf-C3HC4 PF00097.25 ORF93609 - 7.2e-07 29.0 9.1 7.2e-07 29.0 9.1 5.2 3 1 1 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF93609 - 1.4e-06 28.2 5.7 1.4e-06 28.2 5.7 4.3 4 1 0 4 4 4 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 ORF93609 - 2.4e-06 27.6 8.5 2.4e-06 27.6 8.5 5.2 4 2 0 4 4 4 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF93609 - 3.2e-05 23.8 7.4 3.2e-05 23.8 7.4 4.7 4 1 0 4 4 4 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF93609 - 8.6e-05 22.3 9.8 8.6e-05 22.3 9.8 5.6 4 2 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF93609 - 9.8e-05 22.1 4.3 9.8e-05 22.1 4.3 5.5 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF93609 - 0.00072 19.8 8.0 0.00072 19.8 8.0 4.7 4 0 0 4 4 4 1 Ring finger domain Prok-RING_4 PF14447.6 ORF93609 - 0.0028 17.5 5.4 0.0028 17.5 5.4 5.6 4 1 2 6 6 6 1 Prokaryotic RING finger family 4 Pkinase PF00069.25 ORF92059 - 1e-53 182.4 0.0 1.3e-53 182.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF92059 - 2.2e-26 92.7 0.0 2.9e-26 92.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF92059 - 6.8e-06 25.6 0.0 1e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF92059 - 8.5e-06 24.8 0.0 1.3e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF92059 - 0.0035 17.3 0.0 0.0053 16.7 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF92059 - 0.026 13.5 0.0 0.04 12.9 0.0 1.3 1 0 0 1 1 1 0 Haspin like kinase domain Tetraspanin PF00335.20 ORF91396 - 0.018 14.8 0.1 0.064 13.0 0.0 1.9 2 0 0 2 2 2 0 Tetraspanin family Fig1 PF12351.8 ORF91396 - 0.025 14.5 1.4 0.57 10.1 0.1 2.4 2 1 0 2 2 2 0 Ca2+ regulator and membrane fusion protein Fig1 Ground-like PF04155.18 ORF91396 - 0.34 11.6 1.7 0.38 11.5 0.3 1.8 2 0 0 2 2 2 0 Ground-like domain CD20 PF04103.15 ORF89622 - 0.0091 16.1 7.5 0.48 10.5 1.9 3.0 2 1 1 3 3 3 2 CD20-like family DUF3899 PF13038.6 ORF89622 - 0.034 14.7 0.2 0.1 13.1 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) TMEM43 PF07787.12 ORF89622 - 0.039 13.3 0.1 0.091 12.1 0.0 1.6 2 0 0 2 2 2 0 Transmembrane protein 43 DUF4064 PF13273.6 ORF89622 - 0.064 13.5 0.9 0.064 13.5 0.9 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) DUF2370 PF10176.9 ORF89622 - 0.071 12.7 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) DUF202 PF02656.15 ORF89622 - 0.12 12.9 1.0 2 8.9 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF202) DUF872 PF05915.12 ORF89622 - 0.14 12.3 2.0 0.2 11.8 0.2 2.2 1 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF1218 PF06749.12 ORF89622 - 0.17 12.4 0.1 0.17 12.4 0.1 2.6 3 0 0 3 3 2 0 Protein of unknown function (DUF1218) DUF2207 PF09972.9 ORF89622 - 0.3 9.8 2.3 0.65 8.7 2.3 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2417 PF10329.9 ORF89622 - 3.4 7.0 6.6 0.51 9.7 1.1 2.1 1 1 2 3 3 3 0 Region of unknown function (DUF2417) CD225 PF04505.12 ORF89622 - 3.8 7.7 6.8 23 5.2 3.5 2.7 2 0 0 2 2 2 0 Interferon-induced transmembrane protein HU-CCDC81_euk_2 PF18289.1 ORF87846 - 2.1e-07 31.0 0.1 4.6e-07 29.9 0.0 1.6 2 0 0 2 2 2 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_bac_2 PF18175.1 ORF87846 - 0.0022 17.8 0.0 0.11 12.4 0.0 2.4 2 0 0 2 2 2 1 CCDC81-like prokaryotic HU domain 2 PgpA PF04608.13 ORF87846 - 0.16 12.0 0.1 0.26 11.3 0.1 1.2 1 0 0 1 1 1 0 Phosphatidylglycerophosphatase A GvpG PF05120.12 ORF86267 - 0.38 10.8 7.2 0.71 9.9 1.5 3.0 2 0 0 2 2 2 0 Gas vesicle protein G CDC27 PF09507.10 ORF85438 - 0.03 13.7 45.0 0.042 13.3 45.0 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 PPP4R2 PF09184.11 ORF85438 - 1.6 8.2 24.2 2.3 7.7 24.2 1.2 1 0 0 1 1 1 0 PPP4R2 LRRC37AB_C PF14914.6 ORF85387 - 2.4 8.0 6.1 0.22 11.5 0.9 1.8 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain Ank_2 PF12796.7 ORF84236 - 3.9e-12 46.6 0.2 0.0022 18.5 0.0 3.6 2 2 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF84236 - 4.7e-10 39.5 4.6 0.0034 17.7 0.0 4.2 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF84236 - 1.3e-08 35.2 1.4 0.027 15.0 0.0 4.5 4 1 1 5 5 5 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF84236 - 1.4e-08 34.8 2.0 0.026 15.0 0.0 4.2 4 1 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 ORF84236 - 1.6e-08 34.1 1.8 0.03 14.9 0.0 4.7 5 0 0 5 5 5 2 Ankyrin repeat adh_short_C2 PF13561.6 ORF84172 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF84172 - 9.1e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF84172 - 4e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF84172 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF84172 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) HTH_AraC PF00165.23 ORF82742 - 7.1e-23 80.2 0.3 1.6e-11 44.0 0.2 2.7 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_18 PF12833.7 ORF82742 - 4.1e-19 68.6 0.1 8.5e-19 67.6 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_2 PF07883.11 ORF82742 - 0.0047 16.6 0.1 0.008 15.9 0.1 1.3 1 0 0 1 1 1 1 Cupin domain Rrf2 PF02082.20 ORF82742 - 0.094 13.1 0.1 0.2 12.0 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator adh_short PF00106.25 ORF82146 - 9.3e-35 119.9 0.0 1.2e-34 119.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF82146 - 2.4e-20 73.1 0.0 3.2e-20 72.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF82146 - 6.4e-06 26.2 0.0 8.7e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF82146 - 0.074 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BPD_transp_1 PF00528.22 ORF76640 - 8.5e-26 90.8 9.8 8.5e-26 90.8 9.8 2.3 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 ORF76640 - 3.3e-14 52.6 1.4 3.3e-14 52.6 1.4 3.1 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C DUF3176 PF11374.8 ORF76640 - 0.16 12.2 4.2 0.19 11.9 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3176) SafA PF17073.5 ORF76640 - 0.64 10.0 2.9 2.9 7.9 0.4 2.6 2 0 0 2 2 2 0 Two-component-system connector protein adh_short PF00106.25 ORF76243 - 1.7e-12 47.2 0.0 9.1e-10 38.3 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF76243 - 1.2e-08 34.8 0.0 1.7e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase HU-CCDC81_euk_2 PF18289.1 ORF75834 - 2.1e-07 31.0 0.1 4.6e-07 29.9 0.0 1.6 2 0 0 2 2 2 1 CCDC81 eukaryotic HU domain 2 HU-CCDC81_bac_2 PF18175.1 ORF75834 - 0.0022 17.8 0.0 0.11 12.4 0.0 2.4 2 0 0 2 2 2 1 CCDC81-like prokaryotic HU domain 2 PgpA PF04608.13 ORF75834 - 0.16 12.0 0.1 0.26 11.3 0.1 1.2 1 0 0 1 1 1 0 Phosphatidylglycerophosphatase A DUF1840 PF08895.11 ORF75321 - 0.17 12.2 5.3 0.74 10.2 0.9 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF1840) DUF4201 PF13870.6 ORF73393 - 0.002 17.9 17.7 0.002 17.9 17.7 3.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4201) Herpes_UL6 PF01763.16 ORF73393 - 0.32 9.4 16.1 0.12 10.9 10.2 2.0 1 1 0 2 2 2 0 Herpesvirus UL6 like Exonuc_VII_L PF02601.15 ORF73393 - 6.8 6.2 19.5 24 4.4 19.6 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit Golgin_A5 PF09787.9 ORF73393 - 7.5 5.9 38.5 12 5.2 33.1 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 Glutaredoxin2_C PF04399.13 ORF73393 - 8.1 6.3 10.8 3.2 7.6 0.5 2.6 2 1 0 2 2 2 0 Glutaredoxin 2, C terminal domain DUF2203 PF09969.9 ORF73393 - 9.3 7.0 21.1 9.4 7.0 2.5 2.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) PS_Dcarbxylase PF02666.15 ORF70865 - 2e-40 138.5 0.2 2.6e-40 138.1 0.2 1.2 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase FRB_dom PF08771.11 ORF70865 - 0.42 11.0 3.3 0.48 10.9 0.8 2.3 3 0 0 3 3 3 0 FKBP12-rapamycin binding domain Aldo_ket_red PF00248.21 ORF70080 - 1.7e-53 181.7 0.0 2.3e-53 181.3 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family DUF2830 PF11125.8 ORF69625 - 0.17 11.9 0.0 0.3 11.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2830) Asp PF00026.23 ORF69114 - 4.2e-26 92.1 0.2 5.3e-26 91.8 0.2 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease ECSCR PF15820.5 ORF69114 - 0.014 15.2 0.0 0.066 13.0 0.0 2.0 2 0 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator TAXi_C PF14541.6 ORF69114 - 0.016 15.0 0.0 0.025 14.3 0.0 1.3 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal FAM163 PF15069.6 ORF69114 - 0.027 14.9 3.6 0.047 14.1 3.6 1.3 1 0 0 1 1 1 0 FAM163 family DUF3827 PF12877.7 ORF69114 - 0.061 11.7 0.0 0.079 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) TMEM154 PF15102.6 ORF69114 - 0.11 12.5 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 TMEM154 protein family MFS_1 PF07690.16 ORF63637 - 3.1e-06 26.4 16.3 6.9e-06 25.2 16.3 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily CN_hydrolase PF00795.22 ORF62905 - 1.1e-55 188.8 0.0 1.3e-55 188.6 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase EF-hand_1 PF00036.32 ORF54497 - 5e-33 110.2 19.9 1.4e-06 27.4 0.1 7.0 7 0 0 7 7 7 5 EF hand EF-hand_7 PF13499.6 ORF54497 - 6.7e-31 106.6 11.9 1.6e-11 44.5 0.2 4.2 2 1 2 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF54497 - 1.8e-27 92.8 17.3 1.8e-05 24.3 0.0 6.7 7 0 0 7 7 6 5 EF-hand domain EF-hand_5 PF13202.6 ORF54497 - 4.2e-21 73.4 15.9 7.1e-05 22.1 0.0 6.6 6 0 0 6 6 6 6 EF hand EF-hand_8 PF13833.6 ORF54497 - 8.6e-16 57.5 14.7 0.0011 18.8 0.1 6.0 5 1 1 6 6 6 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF54497 - 1.8e-07 31.5 2.7 0.045 14.1 0.2 3.4 3 1 0 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF54497 - 9.4e-07 28.7 1.6 0.077 13.0 0.0 3.7 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF54497 - 6.8e-06 26.3 0.2 0.13 12.6 0.0 3.5 3 1 0 3 3 3 2 EF-hand domain Caleosin PF05042.13 ORF54497 - 1.4e-05 25.1 1.8 0.37 10.7 0.0 4.9 3 1 1 5 5 5 1 Caleosin related protein EF-hand_10 PF14788.6 ORF54497 - 0.00034 20.4 5.6 0.0046 16.8 0.2 3.6 3 1 1 4 4 4 1 EF hand RNA_pol_Rpb1_5 PF04998.17 ORF54497 - 0.087 12.2 0.5 0.1 12.0 0.5 1.3 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 5 p25-alpha PF05517.12 ORF54497 - 0.11 12.7 2.3 3.6 7.7 0.0 3.2 2 2 0 3 3 3 0 p25-alpha Alpha-2-MRAP_C PF06401.11 ORF54497 - 0.11 12.5 1.4 0.5 10.3 0.2 2.1 1 1 0 2 2 2 0 Alpha-2-macroglobulin RAP, C-terminal domain Ku_PK_bind PF08785.11 ORF54497 - 0.11 12.6 1.3 1.8 8.7 0.0 2.8 3 0 0 3 3 3 0 Ku C terminal domain like Dockerin_1 PF00404.18 ORF54497 - 4 7.7 12.6 2.5 8.4 0.3 3.9 4 2 1 5 5 4 0 Dockerin type I domain SAS4 PF15460.6 ORF50441 - 0.33 11.1 5.5 0.82 9.8 5.5 1.8 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 DUF1505 PF07403.11 ORF50441 - 1.1 9.4 7.2 0.56 10.4 4.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1505) Mito_carr PF00153.27 ORF48349 - 1.4e-55 185.2 0.0 3.8e-22 78.0 0.1 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF4148 PF13663.6 ORF48349 - 8.6 6.6 8.5 1.3 9.2 3.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4148) Asp PF00026.23 ORF4450 - 1.7e-30 106.6 0.8 2.1e-30 106.2 0.8 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF2371 PF10177.9 ORF4450 - 0.0096 16.1 0.0 0.015 15.5 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2371) TAXi_C PF14541.6 ORF4450 - 0.018 14.8 0.0 0.051 13.4 0.0 1.8 1 1 0 1 1 1 0 Xylanase inhibitor C-terminal DUF4808 PF16066.5 ORF4450 - 0.076 13.6 0.2 0.15 12.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4808) Abhydrolase_1 PF00561.20 ORF44002 - 1.1e-09 38.3 0.0 4.7e-08 33.0 0.0 2.2 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF44002 - 2.7e-06 26.8 0.0 3.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 PKcGMP_CC PF16808.5 ORF43109 - 0.049 13.5 0.5 0.083 12.8 0.5 1.2 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase UDPGT PF00201.18 ORF3918 - 1.4e-14 53.8 0.0 2.7e-14 52.9 0.0 1.4 2 0 0 2 2 2 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF3918 - 1e-11 45.1 0.0 1.6e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Med26 PF08711.11 ORF32167 - 7.7e-08 32.2 0.0 5.6e-07 29.5 0.0 2.5 2 0 0 2 2 2 1 TFIIS helical bundle-like domain SRP-alpha_N PF04086.13 ORF32167 - 0.049 13.6 6.3 0.064 13.2 6.3 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Glyco_hydro_18 PF00704.28 ORF30699 - 8.1e-18 65.2 0.0 1.2e-17 64.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 DTC PF18102.1 ORF30352 - 1.6e-26 93.0 0.0 2.3e-26 92.5 0.0 1.2 1 0 0 1 1 1 1 Deltex C-terminal domain zf-RING_2 PF13639.6 ORF30352 - 1.5e-08 34.8 6.9 1.2e-06 28.7 2.4 2.3 2 0 0 2 2 2 2 Ring finger domain zf-rbx1 PF12678.7 ORF30352 - 2.2e-07 31.1 8.6 1.6e-06 28.3 9.0 2.0 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF30352 - 2.2e-06 27.4 2.7 1.3e-05 25.0 2.7 2.0 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF30352 - 2.8e-06 27.1 9.5 4.1e-05 23.3 3.3 2.3 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF30352 - 2.4e-05 24.2 4.0 0.00049 20.0 1.4 2.3 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF30352 - 2.9e-05 23.7 2.1 0.026 14.3 0.2 2.8 2 0 0 2 2 2 2 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF30352 - 4.7e-05 23.3 6.9 0.00031 20.7 5.4 2.7 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF30352 - 0.00014 21.6 4.1 0.0022 17.8 1.1 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF30352 - 0.00019 20.9 1.3 0.00045 19.8 1.3 1.5 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 ORF30352 - 0.00042 20.3 0.9 0.00042 20.3 0.9 2.0 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF30352 - 0.007 16.5 5.6 0.1 12.8 5.6 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF30352 - 0.02 14.7 4.1 0.17 11.7 1.0 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF30352 - 0.054 13.7 7.5 0.073 13.3 0.9 2.4 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING zinc_ribbon_16 PF17034.5 ORF30352 - 0.063 13.5 0.3 0.13 12.5 0.3 1.5 1 0 0 1 1 1 0 Zinc-ribbon like family zf-C3H2C3 PF17122.5 ORF30352 - 0.12 12.5 5.6 0.58 10.2 1.4 2.6 2 0 0 2 2 2 0 Zinc-finger Rad50_zn_hook PF04423.14 ORF30352 - 0.14 12.0 0.9 3.7 7.5 0.2 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif Zn-ribbon_8 PF09723.10 ORF30352 - 0.36 11.0 4.0 1.1 9.4 0.9 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zf-RING_4 PF14570.6 ORF30352 - 0.53 10.1 6.8 0.37 10.6 2.6 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 ORF30352 - 2.8 8.3 8.9 0.3 11.4 3.9 1.9 2 0 0 2 2 2 0 RING-like domain RINGv PF12906.7 ORF30352 - 2.8 8.1 7.2 2.7 8.2 3.9 2.2 2 0 0 2 2 2 0 RING-variant domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks61.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks61.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks61.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks61.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- IRF PF00605.17 ORF29762 - 6.6 7.1 7.1 3.6 7.9 0.2 3.1 3 1 1 4 4 4 0 Interferon regulatory factor transcription factor HZS_alpha PF18582.1 ORF29084 - 0.098 13.1 0.0 0.21 12.1 0.0 1.5 1 0 0 1 1 1 0 Hydrazine synthase alpha subunit middle domain PNTB_4TM PF12769.7 ORF26225 - 0.64 10.5 6.1 0.15 12.5 1.4 2.1 2 0 0 2 2 2 0 4TM region of pyridine nucleotide transhydrogenase, mitoch DUF2475 PF10629.9 ORF20339 - 2.7e-07 30.7 0.2 0.011 15.9 0.0 2.8 2 0 0 2 2 2 2 Protein of unknown function (DUF2475) UDPGT PF00201.18 ORF15855 - 2.9e-05 23.1 0.0 5.4e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Ion_trans PF00520.31 ORF153018 - 2.2e-15 56.6 8.3 3.2e-15 56.0 8.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF153018 - 5.3e-11 41.5 0.8 0.00018 21.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF153018 - 2.2e-08 33.0 0.7 0.001 18.4 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF153018 - 1.1e-07 32.1 0.1 2.9e-07 30.8 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF153018 - 2.7e-06 26.6 2.1 0.00011 21.6 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF153018 - 0.00062 19.6 1.0 0.57 10.1 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF153018 - 0.014 15.7 0.0 0.028 14.7 0.0 1.5 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region PRA1 PF03208.19 ORF153018 - 0.054 13.1 7.8 0.12 12.0 7.8 1.5 1 1 0 1 1 1 0 PRA1 family protein PKD_channel PF08016.12 ORF153018 - 0.1 11.2 8.8 0.16 10.7 8.8 1.3 1 0 0 1 1 1 0 Polycystin cation channel Anoctamin PF04547.12 ORF153018 - 3.4 6.4 5.3 7.2 5.3 5.3 1.5 1 1 0 1 1 1 0 Calcium-activated chloride channel DUF4207 PF13904.6 ORF149719 - 0.65 9.7 28.9 1.1 8.9 28.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4207) adh_short_C2 PF13561.6 ORF145805 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF145805 - 9.1e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF145805 - 4e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF145805 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF145805 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) GxGYxYP_C PF14323.6 ORF140582 - 1.4e-18 67.7 0.5 5.2e-13 49.4 0.5 2.9 2 1 0 2 2 2 2 GxGYxYP putative glycoside hydrolase C-terminal domain DDE_3 PF13358.6 ORF135313 - 2.1e-19 69.7 0.0 1.4e-18 67.0 0.0 2.0 1 1 1 2 2 2 1 DDE superfamily endonuclease EF-hand_8 PF13833.6 ORF135265 - 0.017 14.9 0.0 0.044 13.6 0.0 1.7 2 0 0 2 2 2 0 EF-hand domain pair CD20 PF04103.15 ORF135012 - 0.0091 16.1 7.5 0.48 10.5 1.9 3.0 2 1 1 3 3 3 2 CD20-like family DUF3899 PF13038.6 ORF135012 - 0.034 14.7 0.2 0.1 13.1 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) TMEM43 PF07787.12 ORF135012 - 0.039 13.3 0.1 0.091 12.1 0.0 1.6 2 0 0 2 2 2 0 Transmembrane protein 43 DUF4064 PF13273.6 ORF135012 - 0.064 13.5 0.9 0.064 13.5 0.9 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF4064) DUF2370 PF10176.9 ORF135012 - 0.071 12.7 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) DUF202 PF02656.15 ORF135012 - 0.12 12.9 1.0 2 8.9 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF202) DUF872 PF05915.12 ORF135012 - 0.14 12.3 2.0 0.2 11.8 0.2 2.2 1 1 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF1218 PF06749.12 ORF135012 - 0.17 12.4 0.1 0.17 12.4 0.1 2.6 3 0 0 3 3 2 0 Protein of unknown function (DUF1218) DUF2207 PF09972.9 ORF135012 - 0.3 9.8 2.3 0.65 8.7 2.3 1.5 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2417 PF10329.9 ORF135012 - 3.4 7.0 6.6 0.51 9.7 1.1 2.1 1 1 2 3 3 3 0 Region of unknown function (DUF2417) CD225 PF04505.12 ORF135012 - 3.8 7.7 6.8 23 5.2 3.5 2.7 2 0 0 2 2 2 0 Interferon-induced transmembrane protein DnaJ PF00226.31 ORF130916 - 5.2e-11 42.5 0.1 9.5e-11 41.7 0.1 1.4 1 0 0 1 1 1 1 DnaJ domain TerB PF05099.13 ORF130916 - 7e-10 39.0 0.8 7e-10 39.0 0.8 1.8 2 0 0 2 2 2 1 Tellurite resistance protein TerB HTH_10 PF04967.12 ORF130916 - 0.00043 20.0 0.0 0.036 13.9 0.0 2.6 2 0 0 2 2 2 1 HTH DNA binding domain DUF4311 PF14188.6 ORF130916 - 0.00074 19.3 1.0 0.0012 18.7 1.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4311) DDE_3 PF13358.6 ORF12921 - 2.1e-19 69.7 0.0 1.4e-18 67.0 0.0 2.0 1 1 1 2 2 2 1 DDE superfamily endonuclease adh_short PF00106.25 ORF129025 - 9.3e-35 119.9 0.0 1.2e-34 119.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF129025 - 2.4e-20 73.1 0.0 3.2e-20 72.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF129025 - 6.4e-06 26.2 0.0 8.7e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF129025 - 0.074 12.9 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BTK PF00779.19 ORF128714 - 0.091 12.6 1.5 0.18 11.6 1.5 1.5 1 0 0 1 1 1 0 BTK motif EF-hand_7 PF13499.6 ORF125781 - 0.00027 21.3 0.0 0.68 10.4 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF125781 - 0.059 13.3 0.0 0.43 10.6 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain DUF2024 PF09630.10 ORF125360 - 0.036 13.9 0.7 0.078 12.9 0.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) UCH PF00443.29 ORF125145 - 4.1e-19 69.1 0.0 5.5e-19 68.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF125145 - 7.5e-07 29.0 0.0 9.8e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Antimicrobial25 PF16839.5 ORF125145 - 0.034 14.2 0.4 0.034 14.2 0.4 2.0 2 0 0 2 2 2 0 Nematode antimicrobial peptide adh_short_C2 PF13561.6 ORF125090 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF125090 - 9.1e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF125090 - 4e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF125090 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF125090 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) fn3_3 PF14686.6 ORF120711 - 0.00043 20.0 1.2 0.00084 19.1 0.2 1.9 2 0 0 2 2 2 1 Polysaccharide lyase family 4, domain II He_PIG PF05345.12 ORF120711 - 0.021 15.0 3.7 0.021 15.0 3.7 3.0 3 2 0 3 3 3 0 Putative Ig domain TRAP_beta PF05753.14 ORF120711 - 0.26 10.7 5.3 0.24 10.8 0.5 2.6 2 1 1 3 3 3 0 Translocon-associated protein beta (TRAPB) DUF2024 PF09630.10 ORF119159 - 0.036 13.9 0.7 0.078 12.9 0.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2024) adh_short_C2 PF13561.6 ORF118984 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF118984 - 9.2e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF118984 - 3.9e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF118984 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF118984 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) Peptidase_C1 PF00112.23 ORF118870 - 2.5e-64 217.3 6.5 3.1e-64 217.1 6.5 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF118870 - 0.0014 17.5 4.4 0.15 10.8 0.5 2.6 2 1 1 3 3 3 2 Peptidase C1-like family Peptidase_C2 PF00648.21 ORF118870 - 0.073 12.1 0.1 0.11 11.6 0.1 1.2 1 0 0 1 1 1 0 Calpain family cysteine protease Aminotran_1_2 PF00155.21 ORF116138 - 1.2e-20 74.1 0.0 1.6e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DUF1840 PF08895.11 ORF115357 - 0.17 12.2 5.3 0.74 10.2 0.9 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF1840) Aldo_ket_red PF00248.21 ORF112455 - 2.9e-54 184.3 0.1 4.1e-54 183.8 0.1 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family ART PF01129.18 ORF111879 - 3.9e-08 32.9 0.0 7.2e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase 60KD_IMP PF02096.20 ORF111879 - 0.00075 19.4 1.1 0.0012 18.8 0.2 1.8 1 1 1 2 2 2 1 60Kd inner membrane protein ADPrib_exo_Tox PF03496.14 ORF111879 - 0.0046 16.3 0.4 0.023 14.1 0.0 1.9 2 0 0 2 2 2 1 ADP-ribosyltransferase exoenzyme DUF5638 PF18688.1 ORF111879 - 0.075 13.3 1.0 0.21 11.9 0.1 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5638) DNA_repr_REX1B PF14966.6 ORF111879 - 0.11 13.2 0.0 0.23 12.2 0.0 1.4 1 0 0 1 1 1 0 DNA repair REX1-B DDE_3 PF13358.6 ORF107573 - 2.1e-19 69.7 0.0 1.4e-18 67.0 0.0 2.0 1 1 1 2 2 2 1 DDE superfamily endonuclease adh_short_C2 PF13561.6 ORF107113 - 5.1e-46 157.1 0.9 8.8e-45 153.1 0.9 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF107113 - 9.1e-39 132.9 1.3 1.1e-38 132.6 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF107113 - 4e-08 33.4 0.4 6.2e-08 32.8 0.4 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF107113 - 0.0032 16.7 0.1 0.006 15.8 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF3091 PF11291.8 ORF107113 - 0.18 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) DUF4201 PF13870.6 ORF102547 - 0.002 17.9 17.7 0.002 17.9 17.7 3.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4201) Herpes_UL6 PF01763.16 ORF102547 - 0.32 9.4 16.1 0.12 10.9 10.2 2.0 1 1 0 2 2 2 0 Herpesvirus UL6 like Exonuc_VII_L PF02601.15 ORF102547 - 6.8 6.2 19.5 24 4.4 19.6 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit Golgin_A5 PF09787.9 ORF102547 - 7.5 5.9 38.5 12 5.2 33.1 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 Glutaredoxin2_C PF04399.13 ORF102547 - 8.1 6.3 10.8 3.2 7.6 0.5 2.6 2 1 0 2 2 2 0 Glutaredoxin 2, C terminal domain DUF2203 PF09969.9 ORF102547 - 9.3 7.0 21.1 9.4 7.0 2.5 2.9 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) WBP-1 PF11669.8 ORF102154 - 0.02 15.5 1.9 0.16 12.6 0.1 2.4 2 0 0 2 2 2 0 WW domain-binding protein 1 Ion_trans PF00520.31 ORF100283 - 2.2e-15 56.6 8.3 3.2e-15 56.0 8.3 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF100283 - 5.3e-11 41.5 0.8 0.00018 21.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF100283 - 2.2e-08 33.0 0.7 0.001 18.4 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF100283 - 1.1e-07 32.1 0.1 2.9e-07 30.8 0.1 1.7 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF100283 - 2.7e-06 26.6 2.1 0.00011 21.6 0.0 2.4 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF100283 - 0.00062 19.6 1.0 0.57 10.1 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF100283 - 0.014 15.7 0.0 0.028 14.7 0.0 1.5 1 0 0 1 1 1 0 Secreted protein acidic and rich in cysteine Ca binding region PRA1 PF03208.19 ORF100283 - 0.054 13.1 7.8 0.12 12.0 7.8 1.5 1 1 0 1 1 1 0 PRA1 family protein PKD_channel PF08016.12 ORF100283 - 0.1 11.2 8.8 0.16 10.7 8.8 1.3 1 0 0 1 1 1 0 Polycystin cation channel Anoctamin PF04547.12 ORF100283 - 3.4 6.4 5.3 7.2 5.3 5.3 1.5 1 1 0 1 1 1 0 Calcium-activated chloride channel DUF4818 PF16089.5 NODE_22700_length_901_cov_3.046189_g17571_i0reverse_frame_1 - 0.26 11.8 6.0 0.044 14.2 1.5 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4818) SH3_9 PF14604.6 NODE_22643_length_902_cov_265.164937_g17524_i0reverse_frame_1 - 1.2e-05 25.0 1.6 0.021 14.7 0.1 2.4 2 0 0 2 2 2 2 Variant SH3 domain SH3_2 PF07653.17 NODE_22643_length_902_cov_265.164937_g17524_i0reverse_frame_1 - 0.0002 20.9 0.1 0.0086 15.7 0.0 2.4 2 0 0 2 2 2 1 Variant SH3 domain Pkinase PF00069.25 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 2.1e-52 178.1 0.0 3.8e-52 177.3 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 1.4e-31 109.7 0.0 2e-31 109.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 5.9e-06 25.5 0.0 1.2e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 3.8e-05 23.7 0.0 6.4e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 0.00019 20.9 0.0 0.00029 20.2 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 0.0023 16.8 0.0 0.006 15.4 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase FTA2 PF13095.6 NODE_22596_length_904_cov_3.222094_g17486_i0reverse_frame_2 - 0.046 13.3 0.0 0.085 12.5 0.0 1.4 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 RWD PF05773.22 NODE_22584_length_904_cov_96.498274_g17474_i0forward_frame_3 - 8.1 6.8 7.6 0.98 9.7 1.9 2.2 1 1 1 2 2 2 0 RWD domain HdeA PF06411.11 NODE_22584_length_904_cov_96.498274_g17474_i0forward_frame_2 - 0.15 12.2 0.0 0.34 11.1 0.0 1.6 1 0 0 1 1 1 0 HdeA/HdeB family AAA_lid_5 PF17865.1 NODE_22575_length_904_cov_163.639816_g17466_i0reverse_frame_3 - 0.085 12.9 2.9 0.081 13.0 0.8 2.0 2 0 0 2 2 2 0 Midasin AAA lid domain DAP10 PF07213.11 NODE_22566_length_904_cov_466.690449_g17457_i0forward_frame_2 - 0.21 11.6 2.2 4.5 7.3 0.1 2.6 3 0 0 3 3 3 0 DAP10 membrane protein LapA_dom PF06305.11 NODE_22533_length_905_cov_359.714943_g17427_i0forward_frame_2 - 0.16 11.8 0.1 0.16 11.8 0.1 2.2 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain PRD PF00874.20 NODE_22533_length_905_cov_359.714943_g17427_i0forward_frame_2 - 0.19 12.0 4.4 0.44 10.9 0.8 3.0 3 0 0 3 3 3 0 PRD domain Homeobox_KN PF05920.11 NODE_22515_length_906_cov_70.743972_g17410_i0reverse_frame_3 - 7.2e-08 32.2 0.3 1.5e-07 31.2 0.3 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_22515_length_906_cov_70.743972_g17410_i0reverse_frame_3 - 2.7e-05 23.9 0.0 5e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Homeodomain PapJ PF14855.6 NODE_22515_length_906_cov_70.743972_g17410_i0forward_frame_2 - 0.039 13.6 0.0 0.06 13.0 0.0 1.2 1 0 0 1 1 1 0 Pilus-assembly fibrillin subunit, chaperone Steroid_dh PF02544.16 ORF90310 - 2.5e-37 128.2 8.5 4.9e-37 127.2 8.5 1.5 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ubiquitin PF00240.23 ORF90310 - 0.00011 21.9 0.1 0.00023 20.8 0.1 1.5 1 0 0 1 1 1 1 Ubiquitin family YukD PF08817.10 ORF90310 - 0.019 15.6 0.0 0.029 15.1 0.0 1.3 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD Rad60-SLD PF11976.8 ORF90310 - 0.025 14.4 0.5 0.088 12.7 0.5 1.8 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like PI-TkoII_IV PF18714.1 ORF90310 - 0.026 14.0 0.2 0.048 13.1 0.2 1.4 1 0 0 1 1 1 0 DNA polymerase II intein Domain IV UN_NPL4 PF11543.8 ORF90310 - 0.047 14.2 0.1 0.077 13.5 0.1 1.3 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Ubiquitin_4 PF18036.1 ORF90310 - 0.15 12.1 0.7 1.8 8.6 0.3 2.6 2 1 0 2 2 2 0 Ubiquitin-like domain PDR_assoc PF08370.11 ORF90310 - 0.19 11.5 0.2 0.19 11.5 0.2 3.0 3 0 0 3 3 3 0 Plant PDR ABC transporter associated YabA PF06156.13 ORF86246 - 1.7 9.3 6.3 2.3 8.9 0.8 2.7 2 2 0 2 2 2 0 Initiation control protein YabA Zeta_toxin PF06414.12 ORF86221 - 0.028 13.7 0.0 0.055 12.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 ORF86221 - 0.11 12.9 0.0 0.22 11.9 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain His_Phos_2 PF00328.22 ORF82352 - 0.013 14.9 0.1 0.019 14.3 0.1 1.4 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) DUF5385 PF17359.2 ORF82352 - 0.035 13.7 0.2 0.076 12.6 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5385) DUF3302 PF11742.8 ORF82352 - 0.036 14.2 0.1 0.064 13.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3302) FixQ PF05545.11 ORF82352 - 0.043 13.8 0.0 0.079 12.9 0.0 1.4 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ ECSCR PF15820.5 ORF82352 - 0.058 13.2 0.2 0.11 12.3 0.2 1.4 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF4448 PF14610.6 ORF82352 - 0.1 12.4 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) ABC_tran PF00005.27 ORF81426 - 9.9e-10 39.1 0.6 2.2e-09 37.9 0.2 1.8 2 0 0 2 2 2 1 ABC transporter Chromo PF00385.24 ORF81426 - 2.5e-08 33.7 0.3 6.1e-08 32.5 0.3 1.7 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain AAA_21 PF13304.6 ORF81426 - 0.014 15.3 0.1 0.048 13.5 0.0 1.7 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Glyco_hydro_2 PF00703.21 ORF81426 - 0.015 16.0 0.4 0.035 14.8 0.4 1.6 1 0 0 1 1 1 0 Glycosyl hydrolases family 2 SbcCD_C PF13558.6 ORF81426 - 0.085 13.1 0.0 0.54 10.5 0.0 2.4 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit GRDB PF07355.12 ORF77536 - 0.00049 19.5 0.2 0.00074 18.9 0.2 1.4 1 1 0 1 1 1 1 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Steroid_dh PF02544.16 ORF74155 - 2.4e-37 128.2 8.5 4.9e-37 127.2 8.5 1.5 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ubiquitin PF00240.23 ORF74155 - 9.1e-05 22.1 0.2 0.00018 21.2 0.2 1.5 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF74155 - 0.019 14.8 1.0 0.068 13.0 1.0 1.8 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like YukD PF08817.10 ORF74155 - 0.019 15.6 0.0 0.029 15.1 0.0 1.3 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD PI-TkoII_IV PF18714.1 ORF74155 - 0.026 14.0 0.3 0.05 13.1 0.3 1.4 1 0 0 1 1 1 0 DNA polymerase II intein Domain IV UN_NPL4 PF11543.8 ORF74155 - 0.044 14.3 0.1 0.075 13.5 0.1 1.3 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Ubiquitin_4 PF18036.1 ORF74155 - 0.12 12.4 1.0 1.3 9.1 0.5 2.6 2 1 0 2 2 2 0 Ubiquitin-like domain PDR_assoc PF08370.11 ORF74155 - 0.19 11.5 0.2 0.19 11.5 0.2 3.0 3 0 0 3 3 3 0 Plant PDR ABC transporter associated Zeta_toxin PF06414.12 ORF72656 - 0.026 13.8 0.0 0.055 12.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_16 PF13191.6 ORF72656 - 0.1 12.9 0.0 0.2 12.0 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain DHC_N2 PF08393.13 ORF72026 - 1.3e-108 363.7 2.1 1.4e-108 363.5 2.1 1.0 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 2 THP2 PF09432.10 ORF72026 - 0.11 12.6 1.4 0.19 11.8 0.9 1.7 1 1 0 1 1 1 0 Tho complex subunit THP2 SKA2 PF16740.5 ORF72026 - 0.12 12.1 0.3 0.35 10.7 0.3 1.7 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Aldo_ket_red PF00248.21 ORF71203 - 1.7e-51 175.2 0.8 2.9e-51 174.4 0.8 1.3 1 1 0 1 1 1 1 Aldo/keto reductase family YflT PF11181.8 ORF71203 - 0.024 15.1 0.1 0.088 13.3 0.0 1.9 2 0 0 2 2 2 0 Heat induced stress protein YflT Helicase_C PF00271.31 ORF62036 - 1.2e-27 96.5 0.0 1.7e-27 95.9 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SAP PF02037.27 ORF62036 - 2.3e-07 30.4 1.5 5.2e-07 29.3 0.0 2.4 3 0 0 3 3 3 1 SAP domain Lipase_3 PF01764.25 ORF594 - 8.6e-24 84.0 0.0 1.5e-23 83.3 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) DUF676 PF05057.14 ORF594 - 0.0017 17.9 0.1 0.0033 17.0 0.1 1.4 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Peptidase_S9 PF00326.21 ORF594 - 0.0045 16.5 0.1 0.0068 15.9 0.1 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family PGAP1 PF07819.13 ORF594 - 0.048 13.4 0.0 0.072 12.8 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein Hydrolase_4 PF12146.8 ORF594 - 0.061 12.6 0.1 0.095 12.0 0.1 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 WD40 PF00400.32 ORF52990 - 1.2e-30 105.1 5.5 2.6e-07 31.2 0.4 7.0 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF52990 - 3.4e-08 33.7 0.1 0.13 12.6 0.0 4.4 2 2 2 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF52990 - 0.00044 20.2 0.5 0.44 10.4 0.1 3.1 1 1 2 3 3 3 2 Eukaryotic translation initiation factor eIF2A WD40_3 PF15911.5 ORF52990 - 0.0037 17.2 0.1 0.035 14.1 0.0 2.6 2 1 0 3 3 3 1 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF52990 - 0.0078 15.2 0.1 6 5.7 0.0 3.2 2 1 0 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF52990 - 0.0086 14.8 0.1 0.63 8.6 0.1 2.4 3 0 0 3 3 3 2 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF52990 - 0.035 12.9 0.4 3.2 6.4 0.1 2.9 2 1 0 2 2 2 0 Nup133 N terminal like Taxilin PF09728.9 ORF49358 - 3.1e-05 23.3 56.3 4.2e-05 22.9 56.3 1.1 1 0 0 1 1 1 1 Myosin-like coiled-coil protein KH_2 PF07650.17 ORF49358 - 0.014 15.2 1.0 0.014 15.2 1.0 3.6 2 2 1 3 3 3 0 KH domain HALZ PF02183.18 ORF49358 - 0.027 14.7 4.8 0.027 14.7 4.8 4.2 4 0 0 4 4 4 0 Homeobox associated leucine zipper KH_1 PF00013.29 ORF49358 - 0.11 12.4 1.8 0.19 11.6 0.1 2.4 2 1 0 2 2 2 0 KH domain Mod_r PF07200.13 ORF49358 - 0.76 9.9 48.3 1.3 9.1 4.8 4.3 1 1 3 4 4 4 0 Modifier of rudimentary (Mod(r)) protein PI3K_P85_iSH2 PF16454.5 ORF49358 - 1.1 8.9 47.0 20 4.7 30.6 3.4 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4407 PF14362.6 ORF49358 - 2.9 7.2 31.8 0.087 12.2 22.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) YabA PF06156.13 ORF49252 - 1.7 9.3 6.3 2.3 8.9 0.8 2.7 2 2 0 2 2 2 0 Initiation control protein YabA SIS PF01380.22 ORF45717 - 1e-60 203.3 0.0 1.3e-31 109.2 0.0 2.1 2 0 0 2 2 2 2 SIS domain Mito_carr PF00153.27 ORF42182 - 7.8e-45 150.7 6.7 1.2e-15 57.1 0.1 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein Arc_C PF18162.1 ORF4175 - 0.12 12.3 0.0 1.1 9.1 0.0 2.1 1 1 0 2 2 2 0 Arc C-lobe COX7a PF02238.15 ORF30501 - 0.22 12.0 0.0 0.38 11.2 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VII PhyH PF05721.13 ORF28861 - 1.7e-08 35.0 0.2 3.3e-07 30.8 0.0 2.1 2 0 0 2 2 2 1 Phytanoyl-CoA dioxygenase (PhyH) DUF87 PF01935.17 ORF25715 - 0.14 12.2 0.9 0.26 11.4 0.2 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain HTH_1 PF00126.27 ORF2510 - 7.3e-16 57.9 0.0 1.4e-15 57.0 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family LysR_substrate PF03466.20 ORF2510 - 3.6e-10 39.6 0.0 4.9e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_30 PF13556.6 ORF2510 - 0.061 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain zf-RING_2 PF13639.6 ORF23255 - 7.4e-12 45.4 8.5 7.4e-12 45.4 8.5 2.8 3 0 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF23255 - 2.6e-08 33.5 8.5 1e-07 31.6 8.5 2.1 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF23255 - 2e-05 24.4 8.2 2e-05 24.4 8.2 2.7 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF23255 - 3.8e-05 23.9 9.8 3.8e-05 23.9 9.8 2.6 3 1 0 3 3 3 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF23255 - 0.00021 21.3 6.1 0.00025 21.0 1.9 2.8 2 1 1 3 3 3 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF23255 - 0.00023 20.9 5.5 0.00023 20.9 5.5 2.9 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF23255 - 0.0013 18.5 9.9 0.0013 18.5 9.9 2.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF23255 - 0.012 15.5 8.0 0.012 15.5 8.0 2.6 2 0 0 2 2 2 0 zinc-RING finger domain BTB PF00651.31 ORF149923 - 8.6e-11 42.1 0.0 1.5e-10 41.3 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain Tropomyosin PF00261.20 ORF149923 - 0.036 13.4 2.5 0.056 12.8 2.5 1.2 1 0 0 1 1 1 0 Tropomyosin NitrOD5 PF11537.8 ORF149923 - 0.05 13.7 0.1 0.15 12.2 0.0 1.8 2 0 0 2 2 2 0 Nitrosopumilus output domain 5 GSH-S_N PF02951.14 ORF149923 - 0.13 12.4 0.5 0.22 11.6 0.5 1.3 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, N-terminal domain Pkinase PF00069.25 ORF149531 - 3.6e-61 206.8 2.1 3.6e-61 206.8 2.1 1.3 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF149531 - 5.1e-36 124.3 0.3 7.6e-36 123.7 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF149531 - 6.6e-07 28.9 0.0 9e-07 28.5 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF149531 - 3.3e-05 22.8 0.1 4.8e-05 22.3 0.1 1.4 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF149531 - 0.00052 19.4 0.2 0.00093 18.6 0.2 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF149531 - 0.0006 19.5 0.2 0.0012 18.5 0.2 1.5 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 ORF149531 - 0.0023 17.9 0.0 0.0035 17.3 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family GIY-YIG PF01541.24 ORF149531 - 0.09 13.1 0.7 0.09 13.1 0.7 2.0 2 1 1 3 3 3 0 GIY-YIG catalytic domain DUF2306 PF10067.9 ORF149415 - 0.0052 17.0 0.4 0.72 10.1 0.1 2.2 2 0 0 2 2 2 2 Predicted membrane protein (DUF2306) zf-RING_2 PF13639.6 ORF144295 - 1.7e-13 50.7 6.4 4.7e-13 49.2 6.4 1.8 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF144295 - 1.9e-10 40.3 3.0 4.7e-10 39.0 3.0 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF144295 - 1.3e-08 34.6 5.7 4.7e-08 32.9 5.7 2.0 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF144295 - 2.6e-07 30.4 6.4 2.6e-07 30.4 6.4 2.0 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF144295 - 4.2e-07 29.7 4.6 4.2e-07 29.7 4.6 2.5 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF144295 - 7.3e-07 29.4 9.5 1.6e-06 28.3 9.5 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF144295 - 1.3e-06 28.3 1.1 3.4e-06 27.0 0.3 2.2 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF144295 - 3.6e-06 26.7 7.0 1.1e-05 25.1 7.0 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RINGv PF12906.7 ORF144295 - 1.2e-05 25.4 6.1 2.5e-05 24.3 6.1 1.6 1 0 0 1 1 1 1 RING-variant domain FANCL_C PF11793.8 ORF144295 - 2.6e-05 24.3 11.0 8.8e-05 22.6 7.5 2.6 2 1 0 2 2 1 1 FANCL C-terminal domain Baculo_RING PF05883.11 ORF144295 - 3.9e-05 23.7 6.0 8.6e-05 22.5 6.0 1.5 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain Prok-RING_4 PF14447.6 ORF144295 - 9.6e-05 22.2 4.5 0.00026 20.8 4.5 1.8 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF144295 - 0.0019 18.2 4.4 0.0053 16.8 4.4 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Proton_antipo_N PF00662.20 ORF144295 - 0.017 15.2 0.5 0.017 15.2 0.5 1.9 2 0 0 2 2 1 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Zn_ribbon_17 PF17120.5 ORF144295 - 0.071 12.7 5.5 0.16 11.6 5.5 1.6 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type CreD PF06123.12 ORF144295 - 2 7.1 5.2 8.4 5.1 0.2 2.4 2 0 0 2 2 2 0 Inner membrane protein CreD zf-P11 PF03854.14 ORF144295 - 2 8.1 7.8 0.58 9.9 4.2 2.0 2 0 0 2 2 2 0 P-11 zinc finger PS_Dcarbxylase PF02666.15 ORF141159 - 4.1e-58 196.2 0.0 4.8e-58 196.0 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase Glucokinase PF02685.16 ORF132122 - 1.5e-53 181.8 0.0 1.8e-53 181.6 0.0 1.0 1 0 0 1 1 1 1 Glucokinase Fer2_3 PF13085.6 ORF128687 - 6e-28 97.0 0.0 1.3e-27 95.9 0.0 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 ORF128687 - 5.9e-10 39.5 3.5 5.9e-10 39.5 3.5 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF128687 - 5.7e-07 29.9 9.3 0.0064 16.9 8.3 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF128687 - 4.5e-06 26.7 2.6 4.5e-06 26.7 2.6 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer2 PF00111.27 ORF128687 - 0.016 15.1 1.0 0.016 15.1 1.0 2.6 3 0 0 3 3 3 0 2Fe-2S iron-sulfur cluster binding domain Fer4_18 PF13746.6 ORF128687 - 0.033 14.4 9.0 0.31 11.3 0.3 2.6 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF128687 - 0.074 13.7 12.7 0.12 13.0 9.7 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF128687 - 0.33 11.1 10.5 0.27 11.4 6.8 2.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF128687 - 1.4 9.9 10.9 0.48 11.4 1.9 3.0 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain TPR_12 PF13424.6 ORF120704 - 1.9e-08 34.5 6.9 7.1e-05 23.0 0.7 3.1 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.17 ORF120704 - 1.8e-06 27.6 9.9 0.12 12.5 0.9 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF120704 - 1.9e-05 24.5 4.8 2.2 8.7 0.2 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF120704 - 3.5e-05 23.4 1.0 8.3 6.4 0.2 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat SNAP PF14938.6 ORF120704 - 0.002 17.6 2.9 0.085 12.3 4.7 2.2 1 1 1 2 2 2 1 Soluble NSF attachment protein, SNAP TPR_10 PF13374.6 ORF120704 - 0.0024 17.7 6.7 0.25 11.3 0.3 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF120704 - 0.0029 17.5 0.5 35 4.8 0.0 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF120704 - 0.0054 17.2 4.3 0.81 10.2 0.3 3.6 2 1 2 4 4 3 2 Tetratricopeptide repeat DUF4810 PF16068.5 ORF120704 - 0.0055 17.2 1.7 2.3 8.8 0.0 3.4 1 1 3 4 4 4 1 Domain of unknown function (DUF4810) TPR_6 PF13174.6 ORF120704 - 0.0093 16.5 6.8 27 5.7 0.1 5.2 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF120704 - 0.012 16.4 8.0 5.5 8.1 0.0 4.6 3 2 1 4 4 4 0 Tetratricopeptide repeat TPR_17 PF13431.6 ORF120704 - 0.035 14.5 0.0 16 6.1 0.0 3.1 3 0 0 3 3 2 0 Tetratricopeptide repeat DUF3600 PF12207.8 ORF120704 - 0.074 13.0 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3600) TPR_16 PF13432.6 ORF120704 - 0.22 12.2 10.6 1.1 10.0 0.6 3.8 2 2 2 4 4 4 0 Tetratricopeptide repeat UvrD-helicase PF00580.21 ORF114569 - 0.00014 21.6 5.5 0.00018 21.2 5.5 1.1 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain ATP-synt PF00231.19 ORF109654 - 1.2e-68 231.9 2.1 1.3e-68 231.8 2.1 1.0 1 0 0 1 1 1 1 ATP synthase MAP65_ASE1 PF03999.12 ORF109654 - 0.0089 14.8 0.6 0.015 14.0 0.6 1.3 1 0 0 1 1 1 1 Microtubule associated protein (MAP65/ASE1 family) Zip PF02535.22 ORF10604 - 1.7 7.8 10.4 2.5 7.2 10.4 1.3 1 1 0 1 1 1 0 ZIP Zinc transporter D123 PF07065.14 ORF105908 - 4e-73 246.2 9.6 4.9e-73 245.9 9.6 1.1 1 0 0 1 1 1 1 D123 RPW8 PF05659.11 ORF105908 - 0.016 14.9 0.6 0.19 11.4 0.0 2.2 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF4116 PF13475.6 ORF104148 - 3e-31 106.9 0.0 6.7e-11 41.8 0.0 5.4 5 1 0 5 5 5 5 Domain of unknown function (DUF4116) DUF2732 PF10809.8 ORF10270 - 0.43 10.5 3.3 0.35 10.8 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2732) Ribosomal_L30 PF00327.20 ORF102237 - 0.0016 18.3 1.6 0.004 17.0 0.0 2.3 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e Eapp_C PF10238.9 ORF102237 - 6.9 6.7 11.1 19 5.3 9.9 2.3 1 1 0 1 1 1 0 E2F-associated phosphoprotein EpCAM_N PF18635.1 NODE_22761_length_899_cov_11.364583_g17622_i0reverse_frame_1 - 0.3 11.3 3.3 0.6 10.3 3.3 1.5 1 0 0 1 1 1 0 Epithelial cell adhesion molecule N-terminal domain DUF2198 PF09964.9 NODE_22761_length_899_cov_11.364583_g17622_i0forward_frame_1 - 0.04 14.0 1.6 0.14 12.3 1.6 2.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2198) DUF5549 PF17703.1 NODE_22643_length_902_cov_265.164937_g17524_i0forward_frame_3 - 3 7.5 9.1 7.4 6.2 9.1 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5549) GCK PF07802.11 NODE_22625_length_903_cov_71.584101_g17510_i0reverse_frame_3 - 0.035 14.5 0.1 0.1 13.1 0.0 1.8 2 0 0 2 2 2 0 GCK domain Herpes_BTRF1 PF04682.12 NODE_22625_length_903_cov_71.584101_g17510_i0forward_frame_2 - 0.031 13.6 0.0 0.051 12.9 0.0 1.3 1 0 0 1 1 1 0 Herpesvirus BTRF1 protein conserved region U1snRNP70_N PF12220.8 ORF99444 - 0.52 11.0 3.5 1.1 10.0 0.8 2.5 2 1 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Fer4_11 PF13247.6 ORF98657 - 7.3e-23 80.6 10.2 7.3e-23 80.6 10.2 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF98657 - 5.3e-13 48.9 22.6 4.4e-07 30.0 7.1 2.9 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF98657 - 6.2e-13 49.1 20.7 2.7e-06 27.9 4.4 3.2 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF98657 - 1.4e-10 41.1 26.8 4.1e-06 26.8 8.8 3.7 2 2 2 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.27 ORF98657 - 9.1e-10 38.0 37.5 7.4e-06 25.6 3.5 5.3 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_2 PF12797.7 ORF98657 - 2.3e-07 30.5 34.5 3.2e-05 23.8 2.9 4.7 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 ORF98657 - 3.4e-06 26.9 41.2 2.2e-05 24.3 4.2 4.9 5 1 0 5 5 4 4 4Fe-4S binding domain Fer4_16 PF13484.6 ORF98657 - 3.9e-05 24.5 28.1 0.57 11.2 2.1 4.7 2 1 3 5 5 5 5 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 ORF98657 - 0.00025 21.1 12.7 0.00025 21.1 12.7 3.8 4 1 1 5 5 5 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF98657 - 0.0039 18.0 48.0 0.11 13.5 5.7 4.8 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 ORF98657 - 0.0093 16.5 28.0 2.1 9.0 10.9 4.1 3 2 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 ORF98657 - 0.016 15.7 33.3 0.058 13.9 3.7 4.6 4 1 0 4 4 4 0 4Fe-4S binding domain Fer4_8 PF13183.6 ORF98657 - 0.017 15.5 7.5 0.017 15.5 7.5 4.0 3 2 0 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 ORF98657 - 0.027 15.2 4.6 0.21 12.4 0.5 3.9 4 1 1 5 5 4 0 4Fe-4S single cluster domain DUF4850 PF16142.5 ORF98657 - 0.2 11.1 4.5 6.1 6.3 0.4 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF4850) Kelch_5 PF13854.6 ORF98582 - 1.2e-08 34.7 0.1 0.0046 16.9 0.0 2.8 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 ORF98582 - 1.1e-07 31.9 0.5 6.4e-05 23.1 0.0 3.3 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF98582 - 2.9e-07 30.5 4.4 0.0078 16.5 0.0 4.4 5 0 0 5 5 5 2 Kelch motif Kelch_4 PF13418.6 ORF98582 - 3.6e-07 30.1 5.9 0.0021 18.0 0.0 4.1 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF98582 - 1.2e-06 28.0 0.7 0.033 13.8 0.2 2.9 2 1 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 ORF98582 - 0.0004 20.2 0.0 0.59 10.2 0.0 2.9 2 0 0 2 2 2 2 Kelch motif EF-hand_7 PF13499.6 ORF96530 - 2e-23 82.6 0.7 1.8e-09 37.9 0.0 3.4 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 ORF96530 - 2.2e-23 80.1 2.9 5.7e-05 22.7 0.0 5.3 5 0 0 5 5 5 5 EF-hand domain EF-hand_1 PF00036.32 ORF96530 - 2.4e-23 79.9 4.2 8e-05 21.9 0.0 5.3 5 0 0 5 5 5 5 EF hand EF-hand_5 PF13202.6 ORF96530 - 2.6e-21 74.1 5.5 2.8e-06 26.6 0.0 5.3 5 0 0 5 5 5 4 EF hand EF-hand_8 PF13833.6 ORF96530 - 1.5e-09 37.5 3.0 0.35 10.8 0.0 5.2 3 1 1 5 5 5 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF96530 - 0.00015 22.0 0.9 0.03 14.6 0.1 3.8 2 1 2 4 4 4 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 ORF96530 - 0.01 16.1 0.0 23 5.4 0.0 3.9 2 1 2 4 4 4 0 EF-hand domain U1snRNP70_N PF12220.8 ORF96380 - 0.49 11.1 3.3 1.1 10.0 0.8 2.4 2 1 1 3 3 3 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal KIAA1328 PF15369.6 ORF93535 - 1.1 9.0 13.8 16 5.2 13.8 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 Jacalin PF01419.17 ORF93185 - 2.7e-15 56.5 1.8 4.3e-08 33.2 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain Chitin_synth_1 PF01644.17 ORF81446 - 1.6e-19 70.5 0.0 2.2e-19 70.0 0.0 1.2 1 0 0 1 1 1 1 Chitin synthase Chitin_synth_2 PF03142.15 ORF81446 - 9.8e-14 50.9 0.1 6.8e-12 44.8 0.0 2.4 2 1 0 2 2 2 2 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF81446 - 0.0041 17.0 0.0 0.0077 16.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Methyltransf_21 PF05050.12 ORF80413 - 4.2e-11 43.2 0.0 5e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain Abhydrolase_1 PF00561.20 ORF7949 - 2.7e-16 60.0 0.0 3.8e-16 59.5 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF7949 - 5.3e-14 52.1 0.0 7.5e-14 51.6 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF7949 - 1.3e-09 39.0 0.0 1.9e-09 38.5 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 ORF7949 - 3.5e-05 23.5 0.0 5.6e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Chlorophyllase2 PF12740.7 ORF7949 - 0.00036 19.5 0.0 0.0006 18.8 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme DUF915 PF06028.11 ORF7949 - 0.002 17.5 0.7 0.016 14.6 0.1 2.4 1 1 2 3 3 3 1 Alpha/beta hydrolase of unknown function (DUF915) Chlorophyllase PF07224.11 ORF7949 - 0.0089 15.1 0.0 0.014 14.4 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase Mpv17_PMP22 PF04117.12 ORF7949 - 0.014 15.6 0.6 0.055 13.7 0.0 2.2 2 0 0 2 2 2 0 Mpv17 / PMP22 family Palm_thioest PF02089.15 ORF7949 - 0.043 13.6 0.0 0.069 13.0 0.0 1.3 1 0 0 1 1 1 0 Palmitoyl protein thioesterase Ndr PF03096.14 ORF7949 - 0.044 12.5 0.1 0.22 10.2 0.0 2.1 2 0 0 2 2 2 0 Ndr family Ser_hydrolase PF06821.13 ORF7949 - 0.14 12.0 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase RRM_2 PF04059.12 ORF76716 - 3.6e-16 59.2 0.0 5.5e-16 58.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif 2 RRM_1 PF00076.22 ORF76716 - 3.2e-05 23.6 0.0 8.6e-05 22.3 0.0 1.8 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Smg4_UPF3 PF03467.15 ORF76716 - 0.057 13.4 0.1 0.088 12.8 0.1 1.3 1 0 0 1 1 1 0 Smg-4/UPF3 family MORN PF02493.20 ORF70975 - 1.7e-31 106.2 80.2 2.6e-09 36.4 2.3 9.0 10 0 0 10 10 10 7 MORN repeat DUF3048_C PF17479.2 ORF70975 - 5.2 7.5 18.5 3.3 8.1 1.5 4.3 1 1 4 5 5 5 0 Protein of unknown function (DUF3048) C-terminal domain LCAT PF02450.15 ORF69787 - 9.8e-18 64.5 0.0 6.4e-16 58.5 0.0 2.1 1 1 0 2 2 2 1 Lecithin:cholesterol acyltransferase Abhydrolase_6 PF12697.7 ORF69787 - 6.4e-05 23.6 0.0 0.00034 21.3 0.0 1.9 1 1 1 2 2 2 1 Alpha/beta hydrolase family Ser_hydrolase PF06821.13 ORF69787 - 0.0034 17.3 0.0 0.0059 16.5 0.0 1.4 1 0 0 1 1 1 1 Serine hydrolase DUF900 PF05990.12 ORF69787 - 0.0088 15.6 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) DUF726 PF05277.12 ORF69787 - 0.012 14.6 0.0 0.017 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF726) LIDHydrolase PF10230.9 ORF69787 - 0.037 13.6 0.0 0.055 13.0 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase UPF0565 PF10561.9 ORF69787 - 0.045 13.0 0.0 0.077 12.2 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 Esterase PF00756.20 ORF69787 - 0.12 11.9 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 Putative esterase Abhydrolase_1 PF00561.20 ORF69787 - 0.13 11.9 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF69787 - 0.18 11.0 0.0 0.33 10.2 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 KIAA1328 PF15369.6 ORF65196 - 1.1 9.0 13.8 16 5.2 13.8 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 KIAA1328 PF15369.6 ORF64946 - 1.1 9.0 13.8 16 5.2 13.8 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 MFS_1 PF07690.16 ORF63008 - 2e-16 59.9 9.2 2.7e-16 59.5 9.2 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Ca_hom_mod PF14798.6 ORF55226 - 0.19 10.8 4.0 0.4 9.7 4.0 1.5 1 0 0 1 1 1 0 Calcium homeostasis modulator Nab2p_Zf1 PF18260.1 ORF55226 - 0.69 9.9 8.2 0.19 11.7 3.0 2.3 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 DUF4995 PF16386.5 ORF51871 - 0.25 11.4 0.1 0.25 11.4 0.1 2.5 2 1 1 3 3 3 0 Domain of unknown function Shisa PF13908.6 ORF44144 - 0.56 10.4 4.4 2.6 8.2 0.1 2.9 4 0 0 4 4 4 0 Wnt and FGF inhibitory regulator Cwf_Cwc_15 PF04889.12 ORF42160 - 0.025 14.3 6.4 0.045 13.5 6.4 1.4 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein FAP PF07174.11 ORF42160 - 0.1 12.0 9.7 0.14 11.6 9.7 1.2 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) FAP PF07174.11 ORF42035 - 0.1 12.0 9.7 0.14 11.6 9.7 1.2 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) Cwf_Cwc_15 PF04889.12 ORF42035 - 0.22 11.2 7.1 0.39 10.4 7.1 1.4 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein CFEM PF05730.11 ORF40382 - 1.5 9.0 8.7 35 4.6 3.2 3.8 2 1 0 2 2 2 0 CFEM domain NYD-SP28 PF14772.6 ORF39647 - 1.2e-13 51.0 16.7 1.2e-13 51.0 16.7 3.6 2 2 0 2 2 2 1 Sperm tail DUF1640 PF07798.11 ORF39647 - 0.017 15.2 7.8 0.017 15.2 7.8 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) Flu_B_M2 PF04772.12 ORF39647 - 4.1 7.7 11.2 0.37 11.0 1.5 3.4 1 1 3 4 4 4 0 Influenza B matrix protein 2 (BM2) DHHC PF01529.20 ORF39355 - 1.6e-30 105.9 17.1 1.6e-30 105.9 17.1 1.8 2 0 0 2 2 2 1 DHHC palmitoyltransferase Spt4 PF06093.13 ORF39355 - 0.44 10.7 7.3 1.4 9.1 7.3 1.9 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger SAYSvFN PF10260.9 ORF39355 - 5.3 7.0 7.4 1.5 8.8 2.8 2.1 2 0 0 2 2 2 0 Uncharacterized conserved domain (SAYSvFN) Jacalin PF01419.17 ORF38553 - 2.7e-15 56.5 1.8 4.3e-08 33.2 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain Phage_TAC_3 PF06896.11 ORF35140 - 0.047 14.3 0.1 0.49 11.0 0.0 2.2 2 1 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC BAH PF01426.18 ORF24418 - 0.059 13.2 3.6 0.15 11.9 0.3 2.6 1 1 1 3 3 3 0 BAH domain mTERF PF02536.14 ORF23620 - 3.3e-23 82.1 0.0 4e-23 81.8 0.0 1.1 1 0 0 1 1 1 1 mTERF Ig_3 PF13927.6 ORF23620 - 0.0029 18.2 0.2 2.6 8.7 0.0 2.3 1 1 1 2 2 2 2 Immunoglobulin domain I-set PF07679.16 ORF23620 - 0.011 15.8 0.1 6.3 6.9 0.0 2.3 1 1 1 2 2 2 0 Immunoglobulin I-set domain DUF3606 PF12244.8 ORF23620 - 0.17 11.9 0.5 9.3 6.3 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3606) HTH_3 PF01381.22 ORF23620 - 1.4 9.0 4.9 39 4.4 0.0 4.0 5 0 0 5 5 5 0 Helix-turn-helix adh_short PF00106.25 ORF20296 - 2.8e-36 124.8 0.0 3.6e-36 124.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF20296 - 6.5e-21 75.0 0.0 8e-21 74.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF20296 - 4.6e-05 23.4 0.0 6.6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF20296 - 0.00029 20.1 0.0 0.00042 19.5 0.0 1.5 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein T_Ag_DNA_bind PF02217.16 ORF20296 - 0.048 14.3 0.2 0.1 13.2 0.2 1.5 1 0 0 1 1 1 0 Origin of replication binding protein NAD_binding_10 PF13460.6 ORF20296 - 0.085 12.7 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 NAD(P)H-binding UDPG_MGDP_dh_N PF03721.14 ORF20296 - 0.11 12.1 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_2 PF03446.15 ORF20296 - 0.11 12.6 0.0 0.32 11.1 0.0 1.6 1 1 1 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Shikimate_DH PF01488.20 ORF20296 - 0.14 12.3 0.0 0.31 11.1 0.0 1.6 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 ORF20296 - 0.16 12.6 0.0 0.29 11.8 0.0 1.4 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 ORF20296 - 0.18 11.7 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Na_H_Exchanger PF00999.21 ORF18340 - 1.8e-12 46.8 7.5 2e-12 46.6 7.5 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family EnY2 PF10163.9 ORF18340 - 0.13 12.7 3.1 1 9.8 0.1 2.9 3 0 0 3 3 3 0 Transcription factor e(y)2 TMIE PF16038.5 ORF18340 - 0.2 11.5 0.6 0.95 9.4 0.1 2.4 2 0 0 2 2 2 0 TMIE protein TssN PF17555.2 ORF18340 - 6.2 6.1 6.4 9.6 5.5 6.4 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssN UMPH-1 PF05822.12 ORF18021 - 2.2e-40 138.8 8.5 2.8e-40 138.4 8.5 1.1 1 0 0 1 1 1 1 Pyrimidine 5'-nucleotidase (UMPH-1) Jacalin PF01419.17 ORF16960 - 2.7e-15 56.5 1.8 4.3e-08 33.2 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain MORN PF02493.20 ORF150211 - 1.7e-31 106.2 80.2 2.6e-09 36.4 2.3 9.0 10 0 0 10 10 10 7 MORN repeat DUF3048_C PF17479.2 ORF150211 - 5.2 7.5 18.5 3.3 8.1 1.5 4.3 1 1 4 5 5 5 0 Protein of unknown function (DUF3048) C-terminal domain Ank_2 PF12796.7 ORF14886 - 1.3e-51 173.1 11.8 4.3e-11 43.3 0.1 4.7 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank PF00023.30 ORF14886 - 3.8e-43 144.1 17.0 7e-05 23.1 0.5 9.1 8 1 1 9 9 9 9 Ankyrin repeat Ank_4 PF13637.6 ORF14886 - 1.5e-42 143.4 19.9 1e-08 35.6 0.4 6.4 2 2 5 7 7 7 7 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF14886 - 3.4e-36 122.8 22.3 7.3e-08 32.5 0.5 8.9 1 1 8 9 9 9 9 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF14886 - 1e-34 114.6 9.0 0.00045 20.5 0.1 9.1 9 0 0 9 9 9 9 Ankyrin repeat PfkB PF00294.24 ORF147218 - 5.1e-67 226.3 0.4 5.8e-67 226.1 0.4 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF147218 - 0.0075 15.7 0.1 0.014 14.8 0.1 1.4 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase CLIP PF12032.8 ORF14566 - 0.042 14.1 0.6 4.2 7.7 0.2 3.4 3 0 0 3 3 3 0 Regulatory CLIP domain of proteinases KIAA1328 PF15369.6 ORF135836 - 1.1 9.0 13.8 16 5.2 13.8 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 Sugarporin_N PF11471.8 ORF133109 - 0.0098 15.8 1.9 5.9 6.9 0.6 3.0 3 0 0 3 3 3 2 Maltoporin periplasmic N-terminal extension Rab5-bind PF09311.11 ORF133109 - 0.046 13.1 16.5 0.39 10.1 6.1 2.1 1 1 1 2 2 2 0 Rabaptin-like protein CtIP_N PF10482.9 ORF133109 - 0.062 13.3 0.6 0.062 13.3 0.6 2.6 2 1 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain IL2 PF00715.17 ORF133109 - 0.42 10.5 3.4 2.5 8.0 1.5 2.5 1 1 1 2 2 2 0 Interleukin 2 Baculo_PEP_C PF04513.12 ORF133109 - 0.62 10.1 4.9 14 5.7 0.1 2.4 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Gly_acyl_tr_N PF06021.11 ORF133109 - 0.7 10.0 4.5 1.2 9.2 4.5 1.5 1 1 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase Tweety PF04906.13 ORF133109 - 0.76 8.4 3.5 0.7 8.5 1.0 2.0 1 1 1 2 2 2 0 Tweety Flagellin_N PF00669.20 ORF133109 - 0.85 9.7 7.1 0.42 10.7 2.2 2.4 1 1 1 2 2 2 0 Bacterial flagellin N-terminal helical region DUF948 PF06103.11 ORF133109 - 1.7 9.0 3.4 16 5.8 0.2 2.6 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Prominin PF05478.11 ORF133109 - 2 6.2 6.2 3.8 5.3 6.1 1.5 1 1 0 1 1 1 0 Prominin Peptidase_S46 PF10459.9 ORF133109 - 3.9 6.0 10.2 5.1 5.6 10.2 1.0 1 0 0 1 1 1 0 Peptidase S46 V_ATPase_I PF01496.19 ORF133109 - 4.2 5.2 8.5 3.6 5.4 6.9 1.5 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Spc24 PF08286.11 ORF133109 - 5.8 7.2 10.2 2.6 8.3 2.3 2.6 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 GAS PF13851.6 ORF133109 - 5.9 6.2 17.1 6.2 6.1 5.1 2.3 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF3584 PF12128.8 ORF133109 - 8.2 3.8 19.3 20 2.5 18.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) ArfGap PF01412.18 ORF131910 - 3.2e-31 107.8 0.6 7.2e-31 106.7 0.1 2.0 2 0 0 2 2 2 1 Putative GTPase activating protein for Arf TackOD1 PF18551.1 ORF131910 - 0.0035 17.0 0.1 0.0066 16.1 0.1 1.4 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 ASL_C PF08328.11 ORF131910 - 0.01 15.9 0.0 0.8 9.8 0.0 2.3 2 0 0 2 2 2 0 Adenylosuccinate lyase C-terminal FRB_dom PF08771.11 ORF131026 - 0.72 10.3 5.9 0.96 9.9 1.9 2.9 2 2 1 3 3 3 0 FKBP12-rapamycin binding domain DFRP_C PF16543.5 ORF131026 - 3.1 8.3 13.1 0.95 10.0 1.3 3.3 3 0 0 3 3 3 0 DRG Family Regulatory Proteins, Tma46 Transposase_31 PF04754.12 ORF12855 - 6.4e-86 287.2 0.6 8.4e-86 286.8 0.6 1.1 1 0 0 1 1 1 1 Putative transposase, YhgA-like DUF2802 PF10975.8 ORF12855 - 0.0031 17.6 0.1 0.0081 16.3 0.1 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2802) HTH_7 PF02796.15 ORF12855 - 0.093 12.8 0.1 7.9 6.7 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_3 PF01381.22 ORF12855 - 0.15 12.1 0.0 0.52 10.4 0.0 1.9 1 1 0 1 1 1 0 Helix-turn-helix Chitin_synth_1 PF01644.17 ORF126280 - 1.6e-19 70.5 0.0 2.2e-19 70.0 0.0 1.2 1 0 0 1 1 1 1 Chitin synthase Chitin_synth_2 PF03142.15 ORF126280 - 9.8e-14 50.9 0.1 6.8e-12 44.8 0.0 2.4 2 1 0 2 2 2 2 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF126280 - 0.0041 17.0 0.0 0.0077 16.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family group 2 DDE_Tnp_IS1595 PF12762.7 ORF124911 - 0.2 11.7 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 ISXO2-like transposase domain Cation_efflux PF01545.21 ORF123279 - 1.8e-44 151.9 14.6 2.1e-44 151.6 14.6 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 ORF123279 - 1.3e-26 92.5 0.1 2e-26 91.9 0.1 1.2 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter AveC_like PF17198.4 ORF123279 - 0.024 14.1 0.9 0.041 13.3 0.9 1.4 1 0 0 1 1 1 0 Spirocyclase AveC-like DUF1129 PF06570.11 ORF123279 - 0.04 13.4 0.2 0.04 13.4 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) DUF2207 PF09972.9 ORF123279 - 5.1 5.7 7.2 6.9 5.3 5.6 1.8 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) UCH PF00443.29 ORF120413 - 1e-26 94.0 0.0 1.1e-26 93.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF120413 - 8.9e-11 41.9 0.0 1.1e-10 41.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MFS_1 PF07690.16 ORF118843 - 7.1e-22 77.8 20.8 9.4e-19 67.5 6.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 ORF118843 - 0.0017 16.8 1.5 0.0017 16.8 1.5 1.4 2 0 0 2 2 2 1 Organic Anion Transporter Polypeptide (OATP) family Jacalin PF01419.17 ORF113739 - 2.7e-15 56.5 1.8 4.3e-08 33.2 0.6 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain KIAA1328 PF15369.6 ORF110689 - 1.1 9.0 13.8 16 5.2 13.8 2.0 1 1 0 1 1 1 0 Uncharacterised protein KIAA1328 MORN PF02493.20 ORF106344 - 1.7e-31 106.2 80.2 2.6e-09 36.4 2.3 9.0 10 0 0 10 10 10 7 MORN repeat DUF3048_C PF17479.2 ORF106344 - 5.2 7.5 18.5 3.3 8.1 1.5 4.3 1 1 4 5 5 5 0 Protein of unknown function (DUF3048) C-terminal domain IPK PF03770.16 ORF10393 - 0.02 14.7 1.5 0.033 14.0 1.5 1.4 1 1 0 1 1 1 0 Inositol polyphosphate kinase AAA_22 PF13401.6 ORF10393 - 0.036 14.3 0.9 0.057 13.7 0.3 1.6 2 0 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 ORF102581 - 6.5e-31 107.5 17.3 1.5e-30 106.3 12.8 2.2 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 ORF102581 - 1.1e-16 60.5 1.4 1.1e-16 60.5 1.4 4.1 4 0 0 4 4 4 2 N-terminal TM domain of oligopeptide transport permease C DUF624 PF04854.14 ORF102581 - 0.14 12.3 0.1 0.14 12.3 0.1 3.3 3 1 0 3 3 3 0 Protein of unknown function, DUF624 Phage_TAC_3 PF06896.11 ORF100090 - 0.054 14.1 0.2 0.49 11.0 0.0 2.2 2 1 0 2 2 2 0 Phage tail assembly chaperone proteins, TAC U1snRNP70_N PF12220.8 ORF100090 - 0.42 11.3 3.8 1.1 10.0 0.8 2.5 2 1 1 3 3 3 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal CLASP_N PF12348.8 NODE_22895_length_895_cov_4.270930_g17744_i0reverse_frame_1 - 0.065 12.8 0.0 0.15 11.6 0.0 1.5 1 1 0 1 1 1 0 CLASP N terminal Glyco_hydro_31 PF01055.26 NODE_22879_length_895_cov_228.586047_g17728_i0reverse_frame_1 - 7.3e-55 186.9 3.3 8.5e-55 186.7 3.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 RE_Eco29kI PF09517.10 NODE_22773_length_898_cov_201.142526_g17634_i0forward_frame_2 - 3.7 7.2 4.7 4.6 6.8 0.8 2.4 2 0 0 2 2 2 0 Eco29kI restriction endonuclease Orthopox_A5L PF06193.11 NODE_22762_length_899_cov_4.203704_g17623_i0forward_frame_3 - 0.12 11.8 1.2 0.21 11.0 1.2 1.3 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like DUF1077 PF06417.12 NODE_22759_length_899_cov_70.901620_g5824_i1forward_frame_3 - 1.5 8.8 6.7 0.29 11.1 2.7 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1077) Granin PF01271.17 NODE_22704_length_900_cov_543.297110_g17575_i0reverse_frame_3 - 1.7 7.5 7.7 2.2 7.1 7.7 1.1 1 0 0 1 1 1 0 Granin (chromogranin or secretogranin) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks62.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks62.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks62.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks62.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:18 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- cNMP_binding PF00027.29 ORF98454 - 5e-44 148.3 0.0 7e-23 80.5 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Toxin-deaminase PF14424.6 ORF97550 - 0.001 19.2 0.0 0.0019 18.3 0.0 1.3 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases SNAD4 PF18750.1 ORF97550 - 0.049 13.8 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC4 PF18775.1 ORF97550 - 0.072 13.3 0.1 0.29 11.3 0.1 2.0 2 0 0 2 2 2 0 APOBEC4 NAD1 PF18778.1 ORF97550 - 0.19 11.8 0.0 0.44 10.6 0.0 1.5 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 DDE_Tnp_4 PF13359.6 ORF94498 - 0.024 14.3 0.2 10 5.8 0.0 3.1 3 0 0 3 3 3 0 DDE superfamily endonuclease HATPase_c PF02518.26 ORF9449 - 6.7e-22 78.1 0.5 1.3e-21 77.1 0.5 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF9449 - 0.099 12.7 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain LysR_substrate PF03466.20 ORF90701 - 2e-53 180.9 4.8 3e-53 180.3 4.8 1.3 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF90701 - 1.3e-27 95.6 1.0 3.2e-27 94.2 0.2 2.2 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 ORF90701 - 9.7e-07 28.5 0.9 4.2e-05 23.3 0.0 2.7 3 0 0 3 3 3 1 PucR C-terminal helix-turn-helix domain HTH_50 PF18024.1 ORF90701 - 0.0049 16.4 0.4 0.27 10.9 0.1 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 ORF90701 - 0.026 14.4 0.1 0.072 13.0 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_28 PF13518.6 ORF90701 - 0.063 13.4 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 ORF90701 - 0.064 13.2 0.1 0.78 9.7 0.0 2.6 2 0 0 2 2 2 0 MarR family P22_Cro PF14549.6 ORF90701 - 0.16 11.9 0.1 0.55 10.1 0.0 1.8 2 0 0 2 2 2 0 DNA-binding transcriptional regulator Cro TSP_3 PF02412.18 ORF88562 - 0.11 12.2 0.3 0.22 11.3 0.3 1.5 1 0 0 1 1 1 0 Thrombospondin type 3 repeat 3HCDH_N PF02737.18 ORF80425 - 7.5e-55 185.6 1.1 9.4e-55 185.3 1.1 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 ORF80425 - 5.8e-33 113.4 0.0 2.1e-32 111.6 0.0 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GGA_N-GAT PF18308.1 ORF80425 - 0.04 13.5 0.0 0.07 12.8 0.0 1.4 1 0 0 1 1 1 0 GGA N-GAT domain MRAP PF15183.6 ORF75203 - 0.02 14.8 0.2 0.066 13.2 0.0 2.0 2 0 0 2 2 2 0 Melanocortin-2 receptor accessory protein family PIG-Y PF15159.6 ORF75203 - 0.45 11.5 7.9 2.1 9.3 0.3 3.6 3 1 0 3 3 3 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y Methyltransf_21 PF05050.12 ORF74106 - 2.5e-07 30.9 0.1 9.2e-07 29.0 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase FkbM domain MORN PF02493.20 ORF72091 - 1.9e-19 68.3 40.9 5.5e-05 22.8 1.5 7.5 7 1 0 7 7 7 6 MORN repeat Gln-synt_C-ter PF18318.1 ORF72091 - 0.023 14.6 0.4 0.023 14.6 0.4 2.7 3 0 0 3 3 3 0 Glutamine synthetase C-terminal domain Tudor_2 PF18104.1 ORF72091 - 5.8 6.7 6.7 7.2 6.4 0.5 3.6 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain Porin_3 PF01459.22 ORF6889 - 1.6e-11 44.2 0.0 1.8e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic porin Strep_his_triad PF04270.13 ORF67530 - 5 7.2 7.4 0.43 10.6 0.4 2.5 2 1 0 2 2 2 0 Streptococcal histidine triad protein I_LWEQ PF01608.17 ORF65216 - 0.014 15.6 0.1 0.023 14.9 0.1 1.3 1 0 0 1 1 1 0 I/LWEQ domain Methuselah_N PF06652.12 ORF65216 - 0.054 13.4 1.8 0.099 12.5 1.8 1.4 1 0 0 1 1 1 0 Methuselah N-terminus AMP-binding PF00501.28 ORF6428 - 4.6e-24 84.8 0.0 5.6e-24 84.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF6428 - 8.8e-24 84.3 0.2 1.7e-23 83.4 0.2 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF3667 PF12412.8 ORF6428 - 0.14 11.7 0.1 0.26 10.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3667) MFS_1 PF07690.16 ORF61080 - 1.1e-17 64.0 10.5 1.3e-16 60.5 10.4 2.0 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF61080 - 0.0019 17.1 5.2 0.043 12.7 3.5 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter BT1 PF03092.16 ORF61080 - 0.082 11.1 0.5 1.7 6.8 0.0 2.2 2 0 0 2 2 2 0 BT1 family DUF1275 PF06912.11 ORF61080 - 0.73 9.7 11.9 0.17 11.8 2.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1275) DUF3270 PF11674.8 ORF51257 - 0.17 12.1 2.4 0.41 10.9 2.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3270) HlyE PF06109.13 ORF51257 - 2.2 7.5 4.7 3.5 6.8 4.7 1.2 1 0 0 1 1 1 0 Haemolysin E (HlyE) ArAE_2_N PF10337.9 ORF51257 - 2.3 7.2 5.6 3.9 6.4 5.6 1.3 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal DUF3093 PF11292.8 ORF51257 - 3.7 7.8 13.3 0.037 14.3 4.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3093) MORN PF02493.20 ORF50792 - 1.9e-19 68.3 40.9 5.5e-05 22.8 1.5 7.5 7 1 0 7 7 7 6 MORN repeat Gln-synt_C-ter PF18318.1 ORF50792 - 0.023 14.6 0.4 0.023 14.6 0.4 2.7 3 0 0 3 3 3 0 Glutamine synthetase C-terminal domain Tudor_2 PF18104.1 ORF50792 - 5.8 6.7 6.7 7.2 6.4 0.5 3.6 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain AAA_9 PF12781.7 ORF47279 - 1.2e-41 142.3 1.0 1.8e-41 141.7 1.0 1.3 1 0 0 1 1 1 1 ATP-binding dynein motor region DUF1772 PF08592.11 ORF46742 - 0.071 13.4 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) Ac76 PF05814.11 ORF46742 - 0.67 10.0 6.0 0.29 11.1 2.5 2.0 2 0 0 2 2 2 0 Orf76 (Ac76) RseC_MucC PF04246.12 ORF46742 - 1.3 9.0 4.4 6.8 6.7 0.4 2.4 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC SHE3 PF17078.5 ORF424 - 1.9 8.2 14.2 0.15 11.8 1.7 2.8 3 0 0 3 3 3 0 SWI5-dependent HO expression protein 3 DNA_pol3_tau_5 PF12170.8 ORF40749 - 1.6e-59 200.0 4.9 2.4e-59 199.5 4.9 1.3 1 0 0 1 1 1 1 DNA polymerase III tau subunit V interacting with alpha DNA_pol3_tau_4 PF12168.8 ORF40749 - 7e-21 74.6 12.2 7e-21 74.6 12.2 2.1 2 0 0 2 2 2 1 DNA polymerase III subunits tau domain IV DnaB-binding TFIIA PF03153.13 ORF40749 - 7.2 6.5 12.5 9.2 6.1 12.5 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit FtsA PF14450.6 ORF38084 - 9.4e-10 38.8 0.3 1.8e-09 38.0 0.0 1.6 2 0 0 2 2 2 1 Cell division protein FtsA MreB_Mbl PF06723.13 ORF38084 - 2.4e-07 29.9 0.0 3.9e-05 22.6 0.0 2.7 2 1 1 3 3 3 2 MreB/Mbl protein PilM_2 PF11104.8 ORF38084 - 3.6e-05 22.9 0.0 6.7e-05 22.1 0.0 1.3 1 1 0 1 1 1 1 Type IV pilus assembly protein PilM; EutA PF06277.11 ORF38084 - 0.00054 18.9 0.1 0.00083 18.3 0.1 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutA HSP70 PF00012.20 ORF38084 - 0.0033 15.7 0.8 0.0062 14.8 0.8 1.3 1 0 0 1 1 1 1 Hsp70 protein Ppx-GppA PF02541.16 ORF38084 - 0.13 11.7 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Ppx/GppA phosphatase family DDR PF08841.10 ORF38084 - 0.35 9.8 1.8 0.29 10.1 0.3 1.5 2 0 0 2 2 2 0 Diol dehydratase reactivase ATPase-like domain Coprogen_oxidas PF01218.18 ORF33971 - 8.7e-134 444.9 0.0 9.7e-134 444.7 0.0 1.0 1 0 0 1 1 1 1 Coproporphyrinogen III oxidase Pkinase PF00069.25 ORF31513 - 4e-32 111.6 3.9 1.1e-30 106.9 0.2 3.0 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF31513 - 7.6e-15 54.9 3.2 1e-06 28.2 0.0 2.5 2 1 0 3 3 3 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF31513 - 0.033 13.5 0.8 0.95 8.7 0.0 2.6 3 0 0 3 3 3 0 Kinase-like Lipoprot_C PF08794.10 ORF31513 - 0.073 13.1 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Lipoprotein GNA1870 C terminal like Collectrin PF16959.5 ORF31513 - 0.12 12.1 0.7 0.22 11.3 0.7 1.4 1 0 0 1 1 1 0 Renal amino acid transporter APH PF01636.23 ORF31513 - 0.23 11.3 0.0 0.37 10.7 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF3644 PF12358.8 ORF31292 - 4.6 7.8 6.5 1.3 9.6 1.7 2.5 2 2 0 2 2 2 0 Protein of unknown function (DUF3644) LysR_substrate PF03466.20 ORF27562 - 0.083 12.2 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 LysR substrate binding domain zf-C2H2 PF00096.26 ORF25544 - 1.1e-05 25.6 14.6 0.00078 19.8 1.2 3.0 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF25544 - 0.00012 22.6 10.6 0.13 13.2 1.1 3.0 2 0 0 2 2 2 2 C2H2-type zinc finger zf-Di19 PF05605.12 ORF25544 - 0.0083 16.4 4.0 0.012 15.9 3.1 1.7 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf_Hakai PF18408.1 ORF25544 - 0.47 10.2 6.7 0.12 12.1 1.0 2.2 2 0 0 2 2 2 0 C2H2 Hakai zinc finger domain EamA PF00892.20 ORF23047 - 5.9e-24 84.8 32.0 1.6e-16 60.7 13.0 2.0 2 0 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 ORF23047 - 0.0011 18.3 16.1 0.0019 17.5 16.1 1.4 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport HHH_9 PF17674.1 ORF1829 - 1.2 10.1 4.5 4.5 8.3 0.0 3.1 3 0 0 3 3 3 0 HHH domain MAP70 PF07058.11 ORF16567 - 1 8.0 5.2 1.3 7.6 5.2 1.2 1 0 0 1 1 1 0 Microtubule-associated protein 70 EAL PF00563.20 ORF143918 - 1.8e-68 230.6 0.0 2.3e-68 230.3 0.0 1.0 1 0 0 1 1 1 1 EAL domain EF-hand_1 PF00036.32 ORF141438 - 7.8e-32 106.4 18.9 6.7e-07 28.4 0.2 6.9 7 1 0 7 7 7 6 EF hand EF-hand_6 PF13405.6 ORF141438 - 4.7e-27 91.6 15.3 0.00013 21.7 0.2 6.7 6 1 0 6 6 6 6 EF-hand domain EF-hand_7 PF13499.6 ORF141438 - 2.9e-25 88.5 14.8 3.5e-09 37.0 1.1 4.5 2 1 2 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF141438 - 1.5e-20 71.7 14.5 0.00046 19.6 0.0 6.5 6 0 0 6 6 6 5 EF hand EF-hand_8 PF13833.6 ORF141438 - 4.3e-16 58.5 12.0 5.4e-05 23.0 0.1 5.9 5 1 1 6 6 6 3 EF-hand domain pair EF-hand_10 PF14788.6 ORF141438 - 1e-05 25.3 2.8 0.01 15.7 0.2 3.5 4 0 0 4 4 4 2 EF hand SPARC_Ca_bdg PF10591.9 ORF141438 - 5e-05 23.6 0.3 0.8 10.0 0.0 3.4 3 2 0 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF141438 - 0.0019 18.1 2.4 0.82 9.6 0.0 4.4 3 2 2 5 5 5 1 Caleosin related protein EF-hand_4 PF12763.7 ORF141438 - 0.0024 17.8 2.7 0.44 10.5 0.0 3.4 2 2 1 3 3 3 1 Cytoskeletal-regulatory complex EF hand SHOCT PF09851.9 ORF141438 - 0.1 12.4 1.5 8.1 6.3 0.0 3.6 4 0 0 4 4 4 0 Short C-terminal domain Peroxidase_2 PF01328.17 ORF141438 - 0.21 12.1 0.2 0.38 11.2 0.2 1.5 1 1 0 1 1 1 0 Peroxidase, family 2 Dockerin_1 PF00404.18 ORF141438 - 1.1 9.5 8.0 0.44 10.8 0.2 3.7 4 1 1 5 5 5 0 Dockerin type I domain Nucleoside_tran PF01733.18 ORF140879 - 3.3e-34 118.7 11.3 3.8e-34 118.5 11.3 1.0 1 0 0 1 1 1 1 Nucleoside transporter PP2C PF00481.21 ORF140137 - 9.9e-26 90.9 0.0 1.3e-25 90.5 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF140137 - 5.1e-06 26.3 0.1 2.8e-05 23.9 0.1 1.9 1 1 0 1 1 1 1 Protein phosphatase 2C Jnk-SapK_ap_N PF09744.9 ORF13744 - 4 7.6 9.4 7.3 6.8 9.4 1.4 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Beta-lactamase PF00144.24 ORF134351 - 5.1e-24 85.1 0.1 6.8e-24 84.7 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase Hydrolase_6 PF13344.6 ORF125292 - 1.4e-12 47.6 0.0 4.8e-12 45.9 0.0 1.9 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 ORF125292 - 8.7e-12 45.5 0.0 5.3e-05 23.4 0.0 2.2 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF125292 - 1.3e-11 44.4 0.0 2.8e-11 43.3 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 ORF125292 - 8.5e-10 39.3 0.0 0.0011 19.4 0.0 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase EF-hand_6 PF13405.6 ORF122274 - 3.3e-06 26.6 2.1 6.4e-05 22.6 0.4 3.1 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 ORF122274 - 5.5e-06 25.6 0.5 5.5e-06 25.6 0.5 2.3 3 0 0 3 3 3 1 EF hand EF-hand_7 PF13499.6 ORF122274 - 0.00036 20.9 1.5 0.0012 19.2 1.5 1.9 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF122274 - 0.016 15.1 4.0 0.028 14.3 0.4 3.1 3 2 1 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF122274 - 0.044 13.3 0.3 0.099 12.2 0.3 1.5 1 0 0 1 1 1 0 EF hand CCD48 PF15799.5 ORF122274 - 0.24 9.6 0.0 0.34 9.2 0.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 cNMP_binding PF00027.29 ORF121117 - 5e-44 148.3 0.0 7e-23 80.5 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain NAD_binding_2 PF03446.15 ORF120881 - 2.7e-51 173.9 1.9 4.3e-51 173.2 1.9 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF120881 - 6e-38 129.8 2.2 6e-38 129.8 2.2 1.6 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 ORF120881 - 1.4e-09 38.4 1.8 1.5e-08 35.1 0.3 2.4 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 ORF120881 - 4e-08 32.8 0.2 1.3e-07 31.2 0.1 1.8 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 ORF120881 - 6.5e-05 22.9 0.7 0.00014 21.8 0.1 1.9 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 ORF120881 - 0.00063 19.4 0.4 0.0014 18.2 0.1 1.7 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 ORF120881 - 0.00084 19.4 2.0 0.0013 18.8 0.1 2.0 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_N PF05222.15 ORF120881 - 0.0051 17.1 0.0 0.013 15.8 0.0 1.6 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, N-terminal domain adh_short PF00106.25 ORF120881 - 0.0082 15.6 0.1 0.018 14.5 0.1 1.5 1 0 0 1 1 1 1 short chain dehydrogenase TrkA_N PF02254.18 ORF120881 - 0.014 15.6 0.0 0.054 13.7 0.0 2.0 1 1 0 1 1 1 0 TrkA-N domain GFO_IDH_MocA PF01408.22 ORF120881 - 0.029 15.2 0.2 0.085 13.7 0.0 1.8 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold UDPG_MGDP_dh_N PF03721.14 ORF120881 - 0.071 12.7 0.1 0.24 11.0 0.0 1.9 1 1 1 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_2 PF03446.15 ORF118820 - 1.2e-44 152.2 0.2 1.8e-44 151.7 0.2 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF118820 - 2.2e-27 95.7 0.0 3.1e-27 95.2 0.0 1.2 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 2-Hacid_dh_C PF02826.19 ORF118820 - 1.1e-06 28.1 0.0 1.8e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 ORF118820 - 0.00018 21.6 0.0 0.00037 20.5 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 ORF118820 - 0.0041 17.7 0.0 0.011 16.3 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 ORF118820 - 0.051 13.2 0.0 0.099 12.2 0.0 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Pneumo_M2 PF07380.11 ORF104254 - 0.0091 16.2 0.1 0.034 14.4 0.1 1.9 1 0 0 1 1 1 1 Pneumovirus M2 protein DUF313 PF03754.13 ORF102661 - 0.00061 20.0 4.5 0.0043 17.3 0.4 2.5 1 1 0 2 2 2 2 Domain of unknown function (DUF313) CHASE PF03924.13 ORF102661 - 0.053 13.5 0.2 0.081 12.9 0.2 1.4 1 0 0 1 1 1 0 CHASE domain Myb_DNA-binding PF00249.31 ORF102536 - 1e-14 54.5 0.2 1.9e-14 53.5 0.2 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF102536 - 0.00039 20.3 1.7 0.00039 20.3 1.7 2.8 2 1 0 2 2 2 1 Myb DNA-binding like Myb_DNA-bind_6 PF13921.6 ORF102536 - 0.00076 19.7 0.9 0.0021 18.3 0.2 2.2 2 0 0 2 2 2 1 Myb-like DNA-binding domain GIT1_C PF12205.8 ORF102536 - 0.025 14.7 1.0 0.22 11.7 0.1 2.6 3 0 0 3 3 3 0 G protein-coupled receptor kinase-interacting protein 1 C term CBP_CCPA PF17040.5 ORF102536 - 0.12 13.0 3.5 0.91 10.1 0.2 3.0 2 1 1 3 3 3 0 Cellulose-complementing protein A ACT_4 PF13291.6 ORF10045 - 0.00042 20.9 0.0 0.0009 19.8 0.0 1.6 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 ORF10045 - 0.0012 18.6 0.1 0.0031 17.3 0.1 1.8 1 1 0 1 1 1 1 ACT domain ACT_6 PF13740.6 ORF10045 - 0.0012 18.8 0.0 0.031 14.2 0.0 2.3 2 0 0 2 2 2 1 ACT domain SH3_9 PF14604.6 NODE_22945_length_893_cov_264.116550_g17524_i1reverse_frame_1 - 1.2e-05 25.1 1.6 0.02 14.7 0.1 2.4 2 0 0 2 2 2 2 Variant SH3 domain SH3_2 PF07653.17 NODE_22945_length_893_cov_264.116550_g17524_i1reverse_frame_1 - 0.0002 21.0 0.1 0.0085 15.8 0.0 2.5 2 0 0 2 2 2 1 Variant SH3 domain Osw5 PF17062.5 NODE_22929_length_894_cov_3.525029_g17771_i0forward_frame_1 - 0.043 13.9 2.8 0.1 12.7 2.8 1.7 1 0 0 1 1 1 0 Outer spore wall 5 Bd3614_N PF14442.6 NODE_22892_length_895_cov_9.315116_g17741_i0forward_frame_3 - 0.03 14.6 0.8 0.06 13.7 0.8 1.5 1 0 0 1 1 1 0 Bd3614-like deaminase N-terminal Syndecan PF01034.20 NODE_22879_length_895_cov_228.586047_g17728_i0forward_frame_2 - 2.6 8.0 9.1 1.3 9.0 0.9 3.2 3 0 0 3 3 3 0 Syndecan domain Phage_GPD PF05954.11 NODE_22866_length_896_cov_3.486643_g17716_i0reverse_frame_3 - 1.7e-15 57.1 0.1 2.3e-15 56.7 0.1 1.1 1 0 0 1 1 1 1 Phage late control gene D protein (GPD) Bromodomain PF00439.25 NODE_22823_length_897_cov_84.448956_g17680_i0forward_frame_3 - 1.5e-11 44.2 1.4 3e-11 43.2 1.4 1.5 1 0 0 1 1 1 1 Bromodomain AMPK1_CBM PF16561.5 NODE_22818_length_897_cov_106.843387_g17675_i0reverse_frame_2 - 1.2e-09 38.2 0.0 3.5e-09 36.8 0.0 1.8 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase YabA PF06156.13 NODE_22818_length_897_cov_106.843387_g17675_i0reverse_frame_2 - 8.7e-05 23.1 12.5 8.7e-05 23.1 12.5 2.9 3 0 0 3 3 3 1 Initiation control protein YabA TolA_bind_tri PF16331.5 NODE_22818_length_897_cov_106.843387_g17675_i0reverse_frame_2 - 0.015 15.3 10.5 0.015 15.3 10.5 1.9 1 1 1 2 2 2 0 TolA binding protein trimerisation T3SSipB PF16535.5 NODE_22818_length_897_cov_106.843387_g17675_i0reverse_frame_2 - 0.026 15.0 4.6 0.05 14.1 4.6 1.4 1 0 0 1 1 1 0 Type III cell invasion protein SipB SOGA PF11365.8 NODE_22818_length_897_cov_106.843387_g17675_i0reverse_frame_2 - 0.04 15.1 12.8 0.04 15.1 12.8 2.4 3 0 0 3 3 3 0 Protein SOGA KNOX2 PF03791.13 NODE_22818_length_897_cov_106.843387_g17675_i0reverse_frame_2 - 0.065 12.8 0.2 0.17 11.4 0.2 1.7 1 0 0 1 1 1 0 KNOX2 domain DUF2911 PF11138.8 NODE_22818_length_897_cov_106.843387_g17675_i0reverse_frame_2 - 0.12 12.2 2.3 0.5 10.2 1.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2911) UPF0242 PF06785.11 NODE_22818_length_897_cov_106.843387_g17675_i0reverse_frame_2 - 9.4 6.3 24.7 0.18 11.9 16.6 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF1418 PF07214.12 NODE_22818_length_897_cov_106.843387_g17675_i0forward_frame_2 - 0.77 9.6 3.2 2.3 8.2 3.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1418) HYLS1_C PF15311.6 ORF98045 - 1.1 10.1 4.2 0.87 10.4 0.2 2.7 2 1 0 2 2 2 0 Hydrolethalus syndrome protein 1 C-terminus DUF4407 PF14362.6 ORF98045 - 4.6 6.5 8.1 6.7 6.0 8.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) VEGFR-2_TMD PF17988.1 ORF97487 - 2.3 7.7 7.1 0.4 10.2 1.0 2.6 2 0 0 2 2 2 0 VEGFR-2 Transmembrane domain Vta1 PF04652.16 ORF94274 - 3.8e-13 49.6 8.9 3.8e-13 49.6 8.9 1.8 2 0 0 2 2 2 1 Vta1 like Vta1_C PF18097.1 ORF94274 - 3.1e-06 26.8 1.8 4.5e-06 26.2 0.3 2.0 2 0 0 2 2 2 1 Vta1 C-terminal domain Adaptin_binding PF10199.9 ORF94274 - 0.0077 16.8 7.3 0.34 11.5 3.8 2.5 2 0 0 2 2 2 2 Alpha and gamma adaptin binding protein p34 DUF4041 PF13250.6 ORF94274 - 0.012 15.5 1.3 0.094 12.6 0.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4041) Prefoldin PF02996.17 ORF94274 - 0.067 13.1 4.9 0.7 9.8 0.4 3.0 2 1 1 3 3 3 0 Prefoldin subunit Neur_chan_memb PF02932.16 ORF94274 - 0.29 11.1 6.3 0.65 10.0 6.3 1.5 1 1 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CDC45 PF02724.14 ORF94274 - 0.31 9.3 7.8 0.48 8.7 7.8 1.3 1 0 0 1 1 1 0 CDC45-like protein GCIP PF13324.6 ORF94274 - 0.39 10.3 4.8 0.06 12.9 0.7 1.7 2 0 0 2 2 2 0 Grap2 and cyclin-D-interacting D123 PF07065.14 ORF94274 - 0.41 9.7 8.9 3.7 6.6 0.1 3.3 3 1 0 3 3 3 0 D123 Herpes_DNAp_acc PF04929.12 ORF94274 - 0.42 9.5 8.3 0.57 9.1 8.3 1.2 1 0 0 1 1 1 0 Herpes DNA replication accessory factor DUF2408 PF10303.9 ORF94274 - 4.5 7.8 7.2 0.43 11.1 1.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2408) AGH PF17558.2 ORF94274 - 5.3 7.2 8.3 7.1 6.8 0.5 2.4 2 0 0 2 2 2 0 Androgenic gland hormone KxDL PF10241.9 ORF94274 - 7.8 6.9 7.7 1.9 8.8 1.4 2.7 3 0 0 3 3 3 0 Uncharacterized conserved protein zf-C2H2 PF00096.26 ORF93235 - 0.016 15.7 2.0 0.036 14.5 2.0 1.7 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF93235 - 0.017 15.9 1.7 0.043 14.7 1.7 1.7 1 0 0 1 1 1 0 C2H2-type zinc finger zf-Di19 PF05605.12 ORF93235 - 0.11 12.9 0.8 0.23 11.8 0.8 1.5 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Ndc1_Nup PF09531.10 ORF93235 - 2.9 6.5 6.1 2.8 6.5 6.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Presenilin PF01080.17 ORF93235 - 4.2 6.0 10.2 5 5.8 10.2 1.2 1 0 0 1 1 1 0 Presenilin Actin PF00022.19 ORF91837 - 1.5e-54 185.2 0.0 1.8e-54 185.0 0.0 1.0 1 0 0 1 1 1 1 Actin Glyco_tran_WecB PF03808.13 ORF8972 - 1.1e-52 178.3 0.2 1.6e-52 177.9 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferase WecB/TagA/CpsF family EF-hand_1 PF00036.32 ORF8529 - 2.2e-25 86.2 1.7 6.3e-06 25.4 0.1 4.5 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF8529 - 6e-25 87.5 5.3 2.1e-12 47.3 0.1 3.4 2 1 2 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF8529 - 1.1e-22 77.9 0.8 0.0003 20.5 0.1 4.7 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 ORF8529 - 4.4e-20 71.3 0.7 8.3e-07 28.8 0.2 4.3 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 ORF8529 - 4.9e-15 54.2 0.5 0.00039 19.8 0.1 3.7 3 0 0 3 3 3 3 EF hand SPARC_Ca_bdg PF10591.9 ORF8529 - 1.3e-07 31.9 0.2 0.00027 21.2 0.1 2.3 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Dockerin_1 PF00404.18 ORF8529 - 5.3e-05 23.3 0.1 0.11 12.7 0.0 3.3 3 0 0 3 3 3 1 Dockerin type I domain EF-hand_4 PF12763.7 ORF8529 - 0.00052 19.9 0.5 0.17 11.9 0.2 2.8 3 0 0 3 3 3 1 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF8529 - 0.0066 16.3 0.3 0.68 9.8 0.0 2.8 3 0 0 3 3 3 1 EF hand EF-hand_9 PF14658.6 ORF8529 - 0.018 15.4 0.0 0.29 11.5 0.0 2.5 2 0 0 2 2 2 0 EF-hand domain DnaG_DnaB_bind PF08278.11 ORF8529 - 0.048 14.3 2.2 0.28 11.8 0.0 2.5 2 1 0 2 2 2 0 DNA primase DnaG DnaB-binding EF-hand_11 PF08976.11 ORF8529 - 0.14 13.1 0.0 5.8 7.8 0.0 2.6 2 1 1 3 3 3 0 EF-hand domain YueH PF14166.6 ORF84947 - 0.026 14.4 0.6 0.052 13.4 0.6 1.5 1 0 0 1 1 1 0 YueH-like protein DLH PF01738.18 ORF84947 - 0.073 12.6 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF84947 - 0.1 12.0 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Prolyl oligopeptidase family Hydantoinase_B PF02538.14 ORF849 - 0.26 9.7 2.2 0.35 9.2 2.2 1.1 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase APC1_C PF18122.1 ORF849 - 0.99 9.3 4.1 4.3 7.2 2.2 2.7 1 1 0 2 2 2 0 Anaphase-promoting complex sub unit 1 C-terminal domain UBA PF00627.31 ORF83476 - 2.1e-05 24.3 0.1 4.8e-05 23.2 0.1 1.6 1 0 0 1 1 1 1 UBA/TS-N domain MMR1 PF08505.10 ORF83476 - 0.89 9.8 21.6 1.4 9.1 21.6 1.5 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein Presenilin PF01080.17 ORF83476 - 1.5 7.5 25.5 2 7.1 25.5 1.3 1 0 0 1 1 1 0 Presenilin EamA PF00892.20 ORF81413 - 5.8e-05 23.3 21.8 0.029 14.5 13.3 2.9 2 1 0 2 2 2 2 EamA-like transporter family CRT-like PF08627.10 ORF81413 - 0.00084 18.4 11.8 0.026 13.5 11.8 2.0 1 1 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like Nuc_sug_transp PF04142.15 ORF81413 - 0.0073 15.5 0.1 0.0073 15.5 0.1 2.1 1 1 0 2 2 2 1 Nucleotide-sugar transporter TMEM174 PF15029.6 ORF81413 - 0.022 14.5 0.0 0.036 13.8 0.0 1.3 1 0 0 1 1 1 0 Transmembrane protein 174 Cation_ATPase_C PF00689.21 ORF81413 - 0.087 12.5 0.2 0.087 12.5 0.2 2.7 1 1 1 2 2 2 0 Cation transporting ATPase, C-terminus UPF0139 PF03669.13 ORF81413 - 1.2 9.0 8.0 9.9 6.1 0.1 3.4 3 1 0 4 4 4 0 Uncharacterised protein family (UPF0139) DUF4131 PF13567.6 ORF81413 - 3.1 7.4 5.8 4 7.1 0.5 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) DMT_6 PF04342.12 ORF81413 - 4 7.7 10.7 5.3 7.3 4.2 2.7 2 0 0 2 2 2 0 Putative member of DMT superfamily (DUF486) Acyl_transf_3 PF01757.22 ORF81413 - 5.1 6.1 21.1 0.84 8.6 15.0 2.2 1 1 1 2 2 2 0 Acyltransferase family Atg14 PF10186.9 ORF79716 - 0.033 13.3 5.1 0.046 12.8 5.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ZapB PF06005.12 ORF79716 - 0.61 10.6 8.2 1.3 9.5 8.3 1.7 1 1 0 1 1 1 0 Cell division protein ZapB Phage_integrase PF00589.22 ORF79218 - 8.9e-53 178.6 0.0 1.6e-52 177.8 0.0 1.4 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_1 PF02899.17 ORF79218 - 3.2e-27 94.7 0.9 7.1e-27 93.5 0.9 1.6 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_4 PF13495.6 ORF79218 - 7.9e-05 23.1 0.1 0.00085 19.8 0.1 2.3 1 1 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_5 PF13102.6 ORF79218 - 0.0058 17.0 0.0 0.13 12.6 0.0 2.3 1 1 1 2 2 2 1 Phage integrase SAM-like domain DUF3435 PF11917.8 ORF79218 - 0.058 12.3 0.1 0.081 11.8 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) Phage_int_SAM_6 PF18644.1 ORF79218 - 0.19 11.8 0.0 0.37 10.8 0.0 1.5 1 0 0 1 1 1 0 Phage integrase SAM-like domain PKcGMP_CC PF16808.5 ORF78200 - 0.048 13.5 0.5 0.082 12.8 0.5 1.2 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase MFS_1 PF07690.16 ORF77276 - 1.4e-09 37.4 20.6 1e-06 28.0 16.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Prominin PF05478.11 ORF77276 - 0.2 9.6 1.6 0.28 9.1 1.6 1.1 1 0 0 1 1 1 0 Prominin Trp_oprn_chp PF09534.10 ORF77276 - 2.1 8.1 11.7 0.37 10.5 7.4 1.9 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF3382 PF11862.8 ORF77276 - 4.6 7.6 14.2 31 4.9 1.3 3.5 2 1 1 3 3 3 0 Domain of unknown function (DUF3382) DUF2870 PF11069.8 ORF76743 - 3.5e-41 139.5 1.5 4.8e-41 139.1 0.7 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2870) Plasmodium_HRP PF05403.11 ORF73418 - 3 7.6 12.8 6.1 6.6 12.6 1.4 1 1 0 1 1 1 0 Plasmodium histidine-rich protein (HRPII/III) Aa_trans PF01490.18 ORF70990 - 7.5e-18 64.4 2.7 1.2e-17 63.7 2.7 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF997 PF06196.12 ORF70990 - 0.079 13.0 5.5 3 7.9 1.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF997) UPF0016 PF01169.19 ORF67880 - 2e-19 69.7 19.5 5.2e-12 45.9 4.3 2.3 2 0 0 2 2 2 2 Uncharacterized protein family UPF0016 DASH_Ask1 PF08655.10 ORF67278 - 0.005 16.7 0.0 2.2 8.2 0.0 3.0 3 0 0 3 3 3 2 DASH complex subunit Ask1 EndIII_4Fe-2S PF10576.9 ORF66172 - 0.29 11.5 0.2 0.29 11.5 0.2 4.1 5 0 0 5 5 5 0 Iron-sulfur binding domain of endonuclease III Usher PF00577.20 ORF63580 - 3.9e-117 392.4 4.8 4.5e-117 392.2 4.8 1.0 1 0 0 1 1 1 1 Outer membrane usher protein RAD51_interact PF15696.5 ORF63498 - 0.061 13.4 0.7 0.061 13.4 0.7 2.2 2 0 0 2 2 2 0 RAD51 interacting motif Tetraspanin PF00335.20 ORF60467 - 8.8e-13 48.5 10.2 8.8e-13 48.5 10.2 1.9 1 1 0 1 1 1 1 Tetraspanin family Glycophorin_A PF01102.18 ORF60467 - 1.2 9.4 3.5 3.3 8.0 0.0 2.5 2 0 0 2 2 2 0 Glycophorin A DUF1003 PF06210.11 ORF58842 - 0.35 11.0 4.3 0.59 10.2 3.1 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1003) UPF0016 PF01169.19 ORF5607 - 2e-19 69.7 19.5 5.2e-12 45.9 4.3 2.3 2 0 0 2 2 2 2 Uncharacterized protein family UPF0016 Ion_trans PF00520.31 ORF55922 - 6.6e-07 28.8 9.7 1.1e-06 28.0 9.7 1.3 1 0 0 1 1 1 1 Ion transport protein Bax1-I PF01027.20 ORF54609 - 3.1e-38 131.7 13.8 3.1e-38 131.7 13.8 1.8 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 DUF5353 PF17304.2 ORF54609 - 0.016 14.9 5.4 0.88 9.4 1.2 2.9 2 1 0 2 2 2 0 Family of unknown function (DUF5353) Phage_holin_3_1 PF05106.12 ORF54609 - 0.07 13.6 2.9 0.089 13.2 0.6 2.2 1 1 1 2 2 2 0 Phage holin family (Lysis protein S) MitoNEET_N PF10660.9 ORF54609 - 0.73 9.9 4.9 1.3 9.1 0.1 2.8 3 0 0 3 3 3 0 Iron-containing outer mitochondrial membrane protein N-terminus NCE101 PF11654.8 ORF54609 - 7.1 6.4 6.2 2.7 7.8 0.2 2.9 3 0 0 3 3 3 0 Non-classical export protein 1 TPR_14 PF13428.6 ORF53917 - 0.0078 17.0 4.0 4.8 8.3 0.2 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF53917 - 0.071 13.6 0.5 19 5.8 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat CA_like PF10563.9 ORF51783 - 7.1e-38 130.3 0.0 9.2e-38 130.0 0.0 1.1 1 0 0 1 1 1 1 Putative carbonic anhydrase Asp-B-Hydro_N PF05279.11 ORF49566 - 0.011 15.8 4.7 0.018 15.1 4.7 1.3 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region COX6C PF02937.15 ORF49566 - 0.91 9.7 6.6 5.9 7.1 0.4 3.2 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VIc DUF4207 PF13904.6 ORF46365 - 0.71 9.5 30.0 1.2 8.7 30.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4207) TerB_C PF15615.6 ORF42733 - 0.11 12.8 0.1 0.17 12.2 0.1 1.2 1 0 0 1 1 1 0 TerB-C domain DUF2970 PF11174.8 ORF42733 - 1.3 9.0 0.0 1.3 9.0 0.0 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF2970) DPCD PF14913.6 ORF41963 - 2.7e-70 235.6 0.1 3.9e-70 235.1 0.1 1.1 1 0 0 1 1 1 1 DPCD protein family T3SS_ExsE PF18286.1 ORF41388 - 0.00086 19.2 0.2 0.0023 17.9 0.2 1.7 1 0 0 1 1 1 1 Type III secretion system ExsE Rhodanese PF00581.20 ORF28786 - 3.2e-15 56.5 0.0 5.7e-08 33.2 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain CCB1 PF12046.8 ORF26358 - 0.1 12.0 2.2 0.49 9.7 2.2 2.1 1 1 0 1 1 1 0 Cofactor assembly of complex C subunit B DUF4834 PF16118.5 ORF26358 - 2.9 8.9 8.3 0.26 12.3 0.6 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Memo PF01875.17 ORF25265 - 3.1e-85 285.6 0.0 3.5e-85 285.4 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein Pkinase PF00069.25 ORF22901 - 2.4e-78 263.1 0.0 2.7e-78 263.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF22901 - 2.9e-33 115.3 0.0 4e-33 114.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF22901 - 5.5e-05 22.6 0.1 0.083 12.2 0.0 2.4 1 1 1 2 2 2 2 Kinase-like Haspin_kinase PF12330.8 ORF22901 - 0.0022 17.0 0.1 0.007 15.4 0.1 1.7 1 1 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF22901 - 0.013 15.4 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF22901 - 0.02 14.5 0.1 1 9.0 0.0 2.2 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Seadorna_VP7 PF07387.11 ORF22901 - 0.038 13.1 0.0 0.057 12.5 0.0 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 YrbL-PhoP_reg PF10707.9 ORF22901 - 0.068 12.7 0.0 0.097 12.2 0.0 1.2 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Kdo PF06293.14 ORF22901 - 0.069 12.5 0.4 0.15 11.4 0.4 1.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family CBF PF03914.17 ORF22901 - 0.13 12.2 0.0 0.65 10.0 0.0 1.9 1 1 1 2 2 2 0 CBF/Mak21 family RdRP PF05183.12 ORF21829 - 4.5e-14 52.0 0.1 6.4e-14 51.5 0.1 1.2 1 0 0 1 1 1 1 RNA dependent RNA polymerase REGB_T4 PF10715.9 ORF21829 - 0.046 13.9 0.2 0.12 12.6 0.1 1.8 1 1 0 1 1 1 0 T4-page Endoribonuclease RegB MFS_MOT1 PF16983.5 ORF20632 - 2.7 8.5 6.9 0.39 11.1 0.8 2.5 2 1 0 2 2 2 0 Molybdate transporter of MFS superfamily Fibrillarin PF01269.17 ORF19380 - 1.8e-108 360.9 0.2 2.1e-108 360.6 0.2 1.0 1 0 0 1 1 1 1 Fibrillarin GCD14 PF08704.10 ORF19380 - 0.00027 20.7 0.0 0.00038 20.2 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 ORF19380 - 0.0083 15.9 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltr_RsmB-F PF01189.17 ORF19380 - 0.019 14.6 0.0 0.048 13.3 0.0 1.6 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 ORF19380 - 0.14 12.2 0.0 0.38 10.8 0.0 1.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase Trp_Tyr_perm PF03222.13 ORF18278 - 2.4e-100 336.4 20.4 2.7e-100 336.2 20.4 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family DUF4886 PF16227.5 ORF17060 - 6.5e-05 22.2 0.2 0.00012 21.3 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4886) DUF4217 PF13959.6 ORF152680 - 0.00068 19.8 0.1 0.0018 18.5 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) Vpu PF00558.19 ORF152680 - 4.1 7.3 6.5 7.3 6.4 5.2 2.1 2 0 0 2 2 2 0 Vpu protein Vta1 PF04652.16 ORF14934 - 3.8e-13 49.6 8.9 3.8e-13 49.6 8.9 1.8 2 0 0 2 2 2 1 Vta1 like Vta1_C PF18097.1 ORF14934 - 3.1e-06 26.8 1.8 4.5e-06 26.2 0.3 2.0 2 0 0 2 2 2 1 Vta1 C-terminal domain Adaptin_binding PF10199.9 ORF14934 - 0.0077 16.8 7.3 0.34 11.5 3.8 2.5 2 0 0 2 2 2 2 Alpha and gamma adaptin binding protein p34 DUF4041 PF13250.6 ORF14934 - 0.012 15.5 1.3 0.094 12.6 0.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4041) Prefoldin PF02996.17 ORF14934 - 0.067 13.1 4.9 0.7 9.8 0.4 3.0 2 1 1 3 3 3 0 Prefoldin subunit Neur_chan_memb PF02932.16 ORF14934 - 0.29 11.1 6.3 0.65 10.0 6.3 1.5 1 1 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CDC45 PF02724.14 ORF14934 - 0.31 9.3 7.8 0.48 8.7 7.8 1.3 1 0 0 1 1 1 0 CDC45-like protein GCIP PF13324.6 ORF14934 - 0.39 10.3 4.8 0.06 12.9 0.7 1.7 2 0 0 2 2 2 0 Grap2 and cyclin-D-interacting D123 PF07065.14 ORF14934 - 0.41 9.7 8.9 3.7 6.6 0.1 3.3 3 1 0 3 3 3 0 D123 Herpes_DNAp_acc PF04929.12 ORF14934 - 0.42 9.5 8.3 0.57 9.1 8.3 1.2 1 0 0 1 1 1 0 Herpes DNA replication accessory factor DUF2408 PF10303.9 ORF14934 - 4.5 7.8 7.2 0.43 11.1 1.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2408) AGH PF17558.2 ORF14934 - 5.3 7.2 8.3 7.1 6.8 0.5 2.4 2 0 0 2 2 2 0 Androgenic gland hormone KxDL PF10241.9 ORF14934 - 7.8 6.9 7.7 1.9 8.8 1.4 2.7 3 0 0 3 3 3 0 Uncharacterized conserved protein Glyco_tran_28_C PF04101.16 ORF149194 - 2.9e-08 33.9 0.0 4.3e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain UDPGT PF00201.18 ORF149194 - 6e-07 28.6 0.0 8.2e-07 28.2 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Memo PF01875.17 ORF14594 - 1.3e-85 286.8 0.0 1.5e-85 286.6 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein Med11 PF10280.9 ORF143874 - 0.095 13.2 2.3 0.2 12.1 0.6 2.2 1 1 1 2 2 2 0 Mediator complex protein DUF1107 PF06526.12 ORF143874 - 0.3 11.0 2.1 4 7.4 0.3 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1107) TB2_DP1_HVA22 PF03134.19 ORF13749 - 0.0012 18.7 3.9 0.0028 17.6 3.9 1.6 1 0 0 1 1 1 1 TB2/DP1, HVA22 family SpoIIIAH PF12685.7 ORF13749 - 0.058 13.2 3.7 0.061 13.2 0.7 2.2 3 0 0 3 3 3 0 SpoIIIAH-like protein Bax1-I PF01027.20 ORF135628 - 3.1e-38 131.7 13.8 3.1e-38 131.7 13.8 1.8 2 0 0 2 2 2 1 Inhibitor of apoptosis-promoting Bax1 DUF5353 PF17304.2 ORF135628 - 0.016 14.9 5.4 0.88 9.4 1.2 2.9 2 1 0 2 2 2 0 Family of unknown function (DUF5353) Phage_holin_3_1 PF05106.12 ORF135628 - 0.07 13.6 2.9 0.089 13.2 0.6 2.2 1 1 1 2 2 2 0 Phage holin family (Lysis protein S) MitoNEET_N PF10660.9 ORF135628 - 0.73 9.9 4.9 1.3 9.1 0.1 2.8 3 0 0 3 3 3 0 Iron-containing outer mitochondrial membrane protein N-terminus NCE101 PF11654.8 ORF135628 - 7.1 6.4 6.2 2.7 7.8 0.2 2.9 3 0 0 3 3 3 0 Non-classical export protein 1 Vta1 PF04652.16 ORF129627 - 3.8e-13 49.6 8.9 3.8e-13 49.6 8.9 1.8 2 0 0 2 2 2 1 Vta1 like Vta1_C PF18097.1 ORF129627 - 3.1e-06 26.8 1.8 4.5e-06 26.2 0.3 2.0 2 0 0 2 2 2 1 Vta1 C-terminal domain Adaptin_binding PF10199.9 ORF129627 - 0.0077 16.8 7.3 0.34 11.5 3.8 2.5 2 0 0 2 2 2 2 Alpha and gamma adaptin binding protein p34 DUF4041 PF13250.6 ORF129627 - 0.012 15.5 1.3 0.094 12.6 0.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4041) Prefoldin PF02996.17 ORF129627 - 0.067 13.1 4.9 0.7 9.8 0.4 3.0 2 1 1 3 3 3 0 Prefoldin subunit Neur_chan_memb PF02932.16 ORF129627 - 0.29 11.1 6.3 0.65 10.0 6.3 1.5 1 1 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region CDC45 PF02724.14 ORF129627 - 0.31 9.3 7.8 0.48 8.7 7.8 1.3 1 0 0 1 1 1 0 CDC45-like protein GCIP PF13324.6 ORF129627 - 0.39 10.3 4.8 0.06 12.9 0.7 1.7 2 0 0 2 2 2 0 Grap2 and cyclin-D-interacting D123 PF07065.14 ORF129627 - 0.41 9.7 8.9 3.7 6.6 0.1 3.3 3 1 0 3 3 3 0 D123 Herpes_DNAp_acc PF04929.12 ORF129627 - 0.42 9.5 8.3 0.57 9.1 8.3 1.2 1 0 0 1 1 1 0 Herpes DNA replication accessory factor DUF2408 PF10303.9 ORF129627 - 4.5 7.8 7.2 0.43 11.1 1.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2408) AGH PF17558.2 ORF129627 - 5.3 7.2 8.3 7.1 6.8 0.5 2.4 2 0 0 2 2 2 0 Androgenic gland hormone KxDL PF10241.9 ORF129627 - 7.8 6.9 7.7 1.9 8.8 1.4 2.7 3 0 0 3 3 3 0 Uncharacterized conserved protein Yip1 PF04893.17 ORF127783 - 7.2e-11 42.1 7.2 1.2e-10 41.4 7.2 1.4 1 1 0 1 1 1 1 Yip1 domain YIF1 PF03878.15 ORF127783 - 3.3e-05 23.5 10.1 0.00057 19.5 11.4 2.0 1 1 1 2 2 2 2 YIF1 HGTP_anticodon2 PF12745.7 ORF126603 - 0.0016 18.0 1.3 0.0027 17.3 1.3 1.3 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs SelP_N PF04592.14 ORF122160 - 2.2 7.6 21.8 3 7.2 21.8 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region FadA PF09403.10 ORF11848 - 0.18 12.3 10.7 0.13 12.7 5.8 3.0 2 1 1 3 3 3 0 Adhesion protein FadA DUF4407 PF14362.6 ORF11848 - 1.1 8.6 2.4 1.5 8.1 2.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF5499 PF17603.2 ORF110992 - 0.00051 20.6 0.7 0.0016 19.0 0.7 1.9 1 0 0 1 1 1 1 Family of unknown function (DUF5499) Adaptin_binding PF10199.9 ORF110506 - 1e-16 61.7 6.5 2.3e-16 60.5 6.5 1.6 1 0 0 1 1 1 1 Alpha and gamma adaptin binding protein p34 Flp_N PF03930.14 ORF110506 - 0.022 14.7 2.1 0.09 12.8 0.8 2.3 2 0 0 2 2 2 0 Recombinase Flp protein N-terminus Packaging_FI PF14000.6 ORF110506 - 0.034 14.6 0.9 0.059 13.8 0.9 1.4 1 0 0 1 1 1 0 DNA packaging protein FI ABC2_membrane_3 PF12698.7 ORF109315 - 2.7 7.0 3.2 4 6.5 3.2 1.3 1 0 0 1 1 1 0 ABC-2 family transporter protein Thr_dehydrat_C PF00585.18 ORF109006 - 0.084 12.7 0.2 0.4 10.5 0.1 2.1 2 0 0 2 2 2 0 C-terminal regulatory domain of Threonine dehydratase ABC_tran PF00005.27 ORF107512 - 1.3e-09 38.6 0.6 1.4e-08 35.4 0.0 2.5 2 1 0 2 2 2 1 ABC transporter ABC_tran_Xtn PF12848.7 ORF107512 - 1.7e-06 27.9 3.2 1.7e-06 27.9 3.2 2.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 ORF107512 - 0.079 12.8 0.4 0.2 11.4 0.0 1.8 2 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system MCU PF04678.13 ORF107512 - 0.12 12.5 5.5 1.7 8.7 0.1 2.9 3 0 0 3 3 3 0 Mitochondrial calcium uniporter DUF5615 PF18480.1 ORF107512 - 0.19 11.5 0.6 19 5.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5615) TerB_C PF15615.6 ORF106842 - 0.1 12.9 0.1 0.17 12.2 0.1 1.3 1 0 0 1 1 1 0 TerB-C domain DUF2970 PF11174.8 ORF106842 - 1.3 9.0 0.0 1.3 9.0 0.0 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF2970) DER1 PF04511.15 ORF103444 - 2.4e-06 27.6 17.3 3.9e-06 26.9 17.3 1.3 1 0 0 1 1 1 1 Der1-like family Rhomboid PF01694.22 ORF103444 - 0.15 12.1 5.7 0.28 11.2 5.7 1.5 1 0 0 1 1 1 0 Rhomboid family adh_short PF00106.25 ORF100865 - 4.1e-37 127.5 0.0 5e-37 127.3 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF100865 - 1e-21 77.6 0.0 1.3e-21 77.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF100865 - 4.6e-07 29.9 0.0 6.5e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF100865 - 7.1e-05 22.1 0.0 0.00021 20.5 0.0 1.6 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein T_Ag_DNA_bind PF02217.16 ORF100865 - 0.0052 17.4 0.2 0.011 16.3 0.2 1.5 1 0 0 1 1 1 1 Origin of replication binding protein Sacchrp_dh_NADP PF03435.18 ORF100865 - 0.0073 16.6 0.0 0.013 15.8 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 ORF100865 - 0.054 13.4 0.0 0.085 12.7 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_10 PF13460.6 ORF100865 - 0.14 12.0 0.0 0.32 10.9 0.0 1.6 1 0 0 1 1 1 0 NAD(P)H-binding NAD_binding_2 PF03446.15 ORF100865 - 0.17 12.1 0.0 1.5 9.0 0.0 2.1 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase PS-DH PF14765.6 ORF100209 - 0.00037 19.8 0.4 0.00049 19.4 0.4 1.3 1 0 0 1 1 1 1 Polyketide synthase dehydratase TPR_12 PF13424.6 ORF100209 - 0.0031 17.8 1.6 0.021 15.1 0.2 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat zf-C3HC4_4 PF15227.6 NODE_23046_length_891_cov_232.911215_g17869_i0forward_frame_1 - 3.3 7.9 12.4 2.7 8.2 0.6 3.0 3 0 0 3 3 3 0 zinc finger of C3HC4-type, RING Abhydro_lipase PF04083.16 NODE_23023_length_892_cov_21.364061_g17848_i0forward_frame_2 - 2.9e-20 71.6 0.2 5.3e-20 70.7 0.2 1.5 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_23023_length_892_cov_21.364061_g17848_i0forward_frame_2 - 1.2e-08 34.9 0.1 1.7e-08 34.5 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_23023_length_892_cov_21.364061_g17848_i0forward_frame_2 - 0.0017 17.7 0.0 0.0037 16.6 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 UPF0547 PF10571.9 NODE_22975_length_893_cov_3.768065_g17804_i0reverse_frame_3 - 0.085 13.0 1.6 0.16 12.1 0.1 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF5549 PF17703.1 NODE_22945_length_893_cov_264.116550_g17524_i1forward_frame_3 - 2.2 7.9 8.7 2.1 8.0 6.8 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5549) Adaptin_N PF01602.20 NODE_22929_length_894_cov_3.525029_g17771_i0reverse_frame_3 - 4.4e-53 180.6 4.1 5.3e-53 180.4 4.1 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 NODE_22929_length_894_cov_3.525029_g17771_i0reverse_frame_3 - 1.1e-14 54.8 1.4 1.7e-12 47.7 0.0 3.1 3 0 0 3 3 3 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 NODE_22929_length_894_cov_3.525029_g17771_i0reverse_frame_3 - 3.9e-05 24.0 1.5 3.6 8.0 0.0 3.9 3 1 1 4 4 4 3 HEAT repeats Dzip-like_N PF13815.6 NODE_22929_length_894_cov_3.525029_g17771_i0reverse_frame_3 - 0.055 13.4 0.4 0.65 10.0 0.2 2.2 2 0 0 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal HEAT PF02985.22 NODE_22929_length_894_cov_3.525029_g17771_i0reverse_frame_3 - 0.14 12.5 3.3 13 6.4 0.0 3.8 5 0 0 5 5 5 0 HEAT repeat Yippee-Mis18 PF03226.14 NODE_22929_length_894_cov_3.525029_g17771_i0forward_frame_3 - 1.7 8.9 8.8 4.3 7.6 2.7 2.3 2 0 0 2 2 2 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF5131 PF07505.11 NODE_22915_length_894_cov_229.789290_g17758_i0forward_frame_3 - 0.14 11.6 7.2 1.2 8.6 0.1 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF5131) Trefoil PF00088.18 ORF99112 - 0.082 12.8 4.3 0.44 10.5 0.5 2.6 2 0 0 2 2 2 0 Trefoil (P-type) domain FHIPEP PF00771.20 ORF99112 - 5.1 5.4 5.4 7.1 5.0 5.4 1.1 1 0 0 1 1 1 0 FHIPEP family Bgal_small_N PF02929.17 ORF97141 - 2.7e-62 210.6 0.0 3.1e-62 210.4 0.0 1.0 1 0 0 1 1 1 1 Beta galactosidase small chain AA_permease_2 PF13520.6 ORF94081 - 5.1e-31 107.9 20.2 6.2e-31 107.7 20.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 ORF94081 - 1.9e-11 43.3 20.6 2.9e-11 42.6 20.6 1.3 1 1 0 1 1 1 1 Amino acid permease Palm_thioest PF02089.15 ORF92489 - 2.6e-57 194.5 0.0 3e-57 194.3 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF92489 - 0.00013 21.6 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF2974 PF11187.8 ORF92489 - 0.025 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 ORF92489 - 0.14 11.4 0.0 0.84 8.8 0.0 1.8 1 1 1 2 2 2 0 Serine aminopeptidase, S33 OATP PF03137.20 ORF92196 - 1.3 7.2 6.7 2.8 6.1 6.7 1.5 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family A_deaminase PF00962.22 ORF92010 - 1.7e-46 159.1 0.0 2.1e-46 158.8 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase Transposase_21 PF02992.14 ORF90670 - 0.17 11.1 0.1 0.35 10.1 0.1 1.4 1 0 0 1 1 1 0 Transposase family tnp2 Hamartin PF04388.12 ORF90670 - 1.5 7.4 22.9 1.7 7.2 22.9 1.1 1 0 0 1 1 1 0 Hamartin protein NA37 PF04245.13 ORF88781 - 1.6e-91 307.1 0.0 1.7e-91 306.9 0.0 1.0 1 0 0 1 1 1 1 37-kD nucleoid-associated bacterial protein Macro PF01661.21 ORF88250 - 6.2e-30 103.7 0.0 1.4e-29 102.5 0.0 1.6 1 0 0 1 1 1 1 Macro domain Ydc2-catalyt PF09159.10 ORF88250 - 0.19 11.5 0.1 0.19 11.5 0.1 2.0 2 0 0 2 2 2 0 Mitochondrial resolvase Ydc2 / RNA splicing MRS1 WD40 PF00400.32 ORF88224 - 7.3e-25 86.8 9.0 3.5e-06 27.6 0.1 5.9 6 0 0 6 6 6 5 WD domain, G-beta repeat Ge1_WD40 PF16529.5 ORF88224 - 1.4e-10 40.7 3.9 0.011 14.7 0.0 4.1 1 1 3 4 4 4 3 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF88224 - 1.3e-06 27.4 1.3 0.23 10.0 0.0 3.9 2 1 2 4 4 4 4 Nucleoporin Nup120/160 ANAPC4_WD40 PF12894.7 ORF88224 - 0.0016 18.7 0.0 8.6 6.7 0.0 3.8 1 1 3 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 ORF88224 - 0.11 12.5 5.1 1.4 8.9 0.3 3.6 4 0 0 4 4 4 0 WD40-like Beta Propeller Repeat DUF3338 PF11819.8 ORF88224 - 0.31 11.0 0.9 0.6 10.1 0.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3338) Prenyltrans PF00432.21 ORF88182 - 1.2e-38 130.5 15.4 6.3e-13 48.2 3.7 5.1 5 0 0 5 5 5 5 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_C PF13243.6 ORF88182 - 0.0059 15.7 0.0 0.026 13.7 0.0 1.9 1 1 1 2 2 2 2 Squalene-hopene cyclase C-terminal domain SQHop_cyclase_N PF13249.6 ORF88182 - 0.034 13.2 0.0 38 3.2 0.0 3.4 1 1 2 4 4 4 0 Squalene-hopene cyclase N-terminal domain DUF747 PF05346.11 ORF86235 - 0.024 14.1 2.2 0.39 10.1 0.4 2.2 2 0 0 2 2 2 0 Eukaryotic membrane protein family cNMP_binding PF00027.29 ORF80721 - 3.2e-13 49.5 0.0 4.8e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Jnk-SapK_ap_N PF09744.9 ORF80721 - 1.5 9.0 10.6 3.2 8.0 10.6 1.6 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 PfkB PF00294.24 ORF75145 - 6.2e-40 137.4 0.0 7.9e-40 137.0 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF75145 - 0.026 13.9 0.0 0.038 13.3 0.0 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Ribosomal_L4 PF00573.22 ORF66417 - 1.1e-27 97.0 0.1 1.5e-27 96.5 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family IHO1 PF15771.5 ORF64111 - 0.0027 16.5 2.5 0.0048 15.7 2.5 1.3 1 0 0 1 1 1 1 Interactor of HORMAD1 protein 1 Peptidase_S10 PF00450.22 ORF63506 - 1.3e-38 133.5 0.0 1.5e-38 133.3 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Alpha_kinase PF02816.18 ORF57029 - 3.5e-43 147.9 0.0 4.9e-43 147.4 0.0 1.2 1 0 0 1 1 1 1 Alpha-kinase family Asp_protease_2 PF13650.6 ORF55560 - 1.5e-16 60.8 1.4 5.5e-10 39.8 0.1 3.2 2 1 0 2 2 2 2 Aspartyl protease gag-asp_proteas PF13975.6 ORF55560 - 7.9e-14 52.0 0.3 2e-06 28.3 0.0 3.5 3 1 0 3 3 3 2 gag-polyprotein putative aspartyl protease gerPA PF10676.9 ORF54761 - 0.077 13.2 2.9 0.2 11.9 2.9 1.7 1 0 0 1 1 1 0 Spore germination protein gerPA/gerPF Dak2 PF02734.17 ORF5425 - 3.7e-39 134.4 2.2 7.2e-39 133.5 1.6 1.7 2 0 0 2 2 2 1 DAK2 domain Dak1 PF02733.17 ORF5425 - 2.3e-05 23.4 0.1 4.8e-05 22.4 0.0 1.5 2 0 0 2 2 2 1 Dak1 domain Sec34 PF04136.15 ORF51174 - 0.048 13.5 0.7 0.048 13.5 0.7 2.0 2 0 0 2 2 2 0 Sec34-like family Allexi_40kDa PF05549.11 ORF51174 - 0.27 10.7 4.5 0.074 12.6 1.1 1.6 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF1664 PF07889.12 ORF51174 - 2.2 8.3 5.7 1.1 9.3 0.7 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) RasGAP_C PF03836.15 ORF51174 - 3.4 7.8 8.1 1.3 9.2 3.2 2.5 1 1 2 3 3 3 0 RasGAP C-terminus MRP-S31 PF15433.6 ORF51174 - 6.3 6.4 12.8 7.3 6.2 12.2 1.4 1 1 0 1 1 1 0 Mitochondrial 28S ribosomal protein S31 NUDIX PF00293.28 ORF38871 - 4.7e-23 81.7 0.1 8.7e-23 80.8 0.1 1.4 1 0 0 1 1 1 1 NUDIX domain Nudix_hydro PF18290.1 ORF38871 - 1.2e-20 73.3 1.1 1.8e-20 72.7 0.3 1.8 2 0 0 2 2 2 1 Nudix hydrolase domain Aldedh PF00171.22 ORF38416 - 2.6e-80 270.2 0.0 3e-80 270.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Memo PF01875.17 ORF31554 - 3.3e-82 275.7 0.1 3.8e-82 275.5 0.1 1.0 1 0 0 1 1 1 1 Memo-like protein MMPL PF03176.15 ORF26798 - 4.7e-30 104.7 12.1 8.2e-30 103.9 12.1 1.3 1 1 0 1 1 1 1 MMPL family SAPS PF04499.15 ORF26636 - 0.015 14.2 2.0 0.014 14.2 2.0 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Zip PF02535.22 ORF26636 - 0.12 11.6 6.7 0.17 11.0 6.7 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter TMEM208_SND2 PF05620.11 ORF26636 - 0.24 11.2 0.9 0.54 10.0 0.9 1.5 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 V_ATPase_I PF01496.19 ORF26636 - 2.6 5.9 6.4 3.4 5.5 6.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF913 PF06025.12 ORF26636 - 3.2 6.6 7.9 4 6.3 7.3 1.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) ZapB PF06005.12 ORF25130 - 5.5e-24 84.4 18.7 1e-23 83.5 18.7 1.5 1 0 0 1 1 1 1 Cell division protein ZapB DHR10 PF18595.1 ORF25130 - 0.00035 20.6 14.6 0.00054 20.0 14.6 1.2 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain Seryl_tRNA_N PF02403.22 ORF25130 - 0.00058 20.1 7.2 0.0011 19.2 7.2 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain PspA_IM30 PF04012.12 ORF25130 - 0.0016 18.1 6.1 0.0023 17.6 6.1 1.1 1 0 0 1 1 1 1 PspA/IM30 family DUF3450 PF11932.8 ORF25130 - 0.0026 17.1 9.6 0.0039 16.5 9.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Herpes_UL6 PF01763.16 ORF25130 - 0.0093 14.5 4.1 0.012 14.1 4.1 1.1 1 0 0 1 1 1 1 Herpesvirus UL6 like KASH_CCD PF14662.6 ORF25130 - 0.0093 15.8 14.6 0.011 15.5 12.7 1.8 2 0 0 2 2 2 1 Coiled-coil region of CCDC155 or KASH YabA PF06156.13 ORF25130 - 0.017 15.8 8.4 0.032 14.9 8.4 1.4 1 0 0 1 1 1 0 Initiation control protein YabA UPF0242 PF06785.11 ORF25130 - 0.017 15.3 11.0 0.027 14.6 11.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Leu_zip PF15294.6 ORF25130 - 0.017 14.6 6.9 0.029 13.9 6.9 1.3 1 0 0 1 1 1 0 Leucine zipper Filament PF00038.21 ORF25130 - 0.019 14.5 8.6 0.028 14.0 8.6 1.1 1 0 0 1 1 1 0 Intermediate filament protein HemX PF04375.14 ORF25130 - 0.022 14.1 8.3 0.032 13.5 8.3 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase ADIP PF11559.8 ORF25130 - 0.032 14.3 10.3 0.051 13.7 10.3 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding Cep57_CLD_2 PF14197.6 ORF25130 - 0.049 13.7 8.4 0.091 12.9 8.4 1.4 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 BRE1 PF08647.11 ORF25130 - 0.051 13.7 7.8 0.088 12.9 7.8 1.3 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase betaPIX_CC PF16523.5 ORF25130 - 0.068 13.0 4.1 0.14 12.0 4.1 1.5 1 0 0 1 1 1 0 betaPIX coiled coil GIT_CC PF16559.5 ORF25130 - 0.085 12.7 10.2 0.12 12.3 9.2 1.7 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF4407 PF14362.6 ORF25130 - 0.11 11.8 1.3 0.18 11.1 1.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) HAUS-augmin3 PF14932.6 ORF25130 - 0.14 11.7 9.6 0.21 11.1 9.6 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Jnk-SapK_ap_N PF09744.9 ORF25130 - 0.14 12.3 10.3 0.22 11.7 10.3 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Mod_r PF07200.13 ORF25130 - 0.15 12.2 9.8 0.63 10.1 8.3 2.0 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein TMF_TATA_bd PF12325.8 ORF25130 - 0.15 12.2 11.6 0.23 11.7 11.6 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding APG6_N PF17675.1 ORF25130 - 0.17 12.4 12.8 0.28 11.7 12.8 1.2 1 0 0 1 1 1 0 Apg6 coiled-coil region Tho2 PF11262.8 ORF25130 - 0.2 10.8 3.7 0.07 12.3 1.2 1.5 2 0 0 2 2 2 0 Transcription factor/nuclear export subunit protein 2 CtIP_N PF10482.9 ORF25130 - 0.2 11.7 11.8 0.16 12.0 3.3 2.3 2 0 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain Uso1_p115_C PF04871.13 ORF25130 - 0.22 11.9 10.7 0.32 11.4 10.7 1.2 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region dCache_2 PF08269.11 ORF25130 - 0.27 10.4 5.3 0.43 9.7 5.3 1.2 1 0 0 1 1 1 0 Cache domain DUF4140 PF13600.6 ORF25130 - 0.28 11.6 4.6 0.59 10.6 4.6 1.5 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) CP12 PF02672.15 ORF25130 - 0.3 11.9 4.8 1.5 9.6 3.3 2.7 3 0 0 3 3 2 0 CP12 domain CCDC-167 PF15188.6 ORF25130 - 0.36 11.2 5.5 0.85 10.0 5.5 1.7 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 DUF4763 PF15960.5 ORF25130 - 0.44 9.8 11.0 0.73 9.1 11.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) DUF1664 PF07889.12 ORF25130 - 0.51 10.4 3.8 1 9.4 3.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 ORF25130 - 0.51 9.2 9.1 0.77 8.6 9.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein HMMR_N PF15905.5 ORF25130 - 0.6 9.5 9.8 0.84 9.0 9.8 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DUF4757 PF15949.5 ORF25130 - 0.7 10.3 7.8 1.1 9.7 7.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4757) Atg14 PF10186.9 ORF25130 - 0.89 8.6 6.0 1.5 7.9 6.0 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Tox-ODYAM1 PF15642.6 ORF25130 - 1.1 8.2 5.6 1.6 7.6 5.6 1.1 1 0 0 1 1 1 0 Toxin in Odyssella and Amoebophilus CENP-H PF05837.12 ORF25130 - 1.9 8.9 9.7 3.5 8.1 9.7 1.4 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DivIC PF04977.15 ORF25130 - 2.7 7.8 12.1 0.85 9.4 7.5 2.2 1 1 1 2 2 2 0 Septum formation initiator FlaC_arch PF05377.11 ORF25130 - 4.5 7.7 8.8 2.7 8.5 3.9 2.2 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Spc24 PF08286.11 ORF25130 - 5 7.4 12.0 29 5.0 12.0 2.2 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 bZIP_2 PF07716.15 ORF25130 - 8.5 6.6 14.5 2.2 8.4 3.7 2.7 1 1 1 2 2 2 0 Basic region leucine zipper DUF1360 PF07098.11 ORF24493 - 0.013 15.4 0.2 0.025 14.5 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1360) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks63.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks63.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks63.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks63.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- TFIIS_M PF07500.14 ORF16386 - 5.8e-20 71.9 0.0 9e-20 71.2 0.0 1.3 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain Palm_thioest PF02089.15 ORF149520 - 2.6e-57 194.5 0.0 3e-57 194.3 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF149520 - 0.00013 21.6 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF2974 PF11187.8 ORF149520 - 0.025 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 ORF149520 - 0.14 11.4 0.0 0.84 8.8 0.0 1.8 1 1 1 2 2 2 0 Serine aminopeptidase, S33 PCI PF01399.27 ORF149139 - 1.4e-07 32.0 7.2 2e-06 28.2 7.1 2.3 1 1 0 1 1 1 1 PCI domain TPR_2 PF07719.17 ORF149139 - 0.033 14.3 0.2 0.081 13.1 0.2 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 ORF149139 - 0.033 14.0 0.2 0.087 12.7 0.2 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat LAGLIDADG_WhiA PF14527.6 ORF149139 - 0.16 12.0 4.3 3.8 7.6 0.3 2.9 1 1 0 2 2 2 0 WhiA LAGLIDADG-like domain DnaJ PF00226.31 ORF138937 - 7.4e-10 38.8 0.0 2.1e-09 37.4 0.0 1.8 1 0 0 1 1 1 1 DnaJ domain Retrotrans_gag PF03732.17 ORF138937 - 0.22 11.8 6.5 3.7 7.9 0.9 3.1 2 1 1 3 3 3 0 Retrotransposon gag protein AAA_23 PF13476.6 ORF138937 - 0.65 10.5 3.2 1 9.8 3.2 1.4 1 0 0 1 1 1 0 AAA domain DUF4047 PF13256.6 ORF138937 - 1.4 9.1 6.9 12 6.1 4.0 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF4047) Sigma70_ner PF04546.13 ORF138937 - 9.7 6.0 15.0 0.56 10.1 0.1 2.3 1 1 1 2 2 2 0 Sigma-70, non-essential region AIPR PF10592.9 ORF134319 - 0.0016 18.2 5.1 0.0016 18.2 5.1 1.5 1 1 0 1 1 1 1 AIPR protein Fmp27_SW PF10305.9 ORF134319 - 0.017 15.8 1.5 0.043 14.5 1.2 1.9 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Dynein_AAA_lid PF17852.1 ORF134319 - 0.049 13.7 3.2 2 8.5 0.4 2.9 3 0 0 3 3 3 0 Dynein heavy chain AAA lid domain Palm_thioest PF02089.15 ORF133778 - 3.5e-52 177.7 0.0 4e-52 177.5 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase Lipase_2 PF01674.18 ORF133778 - 0.0058 16.2 0.0 0.3 10.6 0.0 2.6 2 1 0 2 2 2 1 Lipase (class 2) Abhydrolase_1 PF00561.20 ORF133778 - 0.062 12.9 0.1 0.31 10.7 0.0 2.2 2 1 0 2 2 2 0 alpha/beta hydrolase fold DUF676 PF05057.14 ORF133778 - 0.15 11.5 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Esterase PF00756.20 ORF1329 - 3.5e-72 243.1 0.0 4.1e-72 242.9 0.0 1.0 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF1329 - 9.1e-07 28.6 0.0 1.5e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Esterase_phd PF10503.9 ORF1329 - 2.1e-05 24.2 0.0 0.1 12.1 0.0 2.1 2 0 0 2 2 2 2 Esterase PHB depolymerase Hydrolase_4 PF12146.8 ORF1329 - 3.7e-05 23.1 0.3 0.0021 17.4 0.1 2.1 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF1329 - 0.0016 19.1 2.4 0.0029 18.2 0.3 1.9 1 1 0 2 2 2 1 Alpha/beta hydrolase family Chlorophyllase2 PF12740.7 ORF1329 - 0.0018 17.3 0.0 0.0026 16.7 0.0 1.4 1 1 0 1 1 1 1 Chlorophyllase enzyme Lipase_3 PF01764.25 ORF1329 - 0.016 15.1 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_1 PF00561.20 ORF1329 - 0.021 14.5 1.2 0.39 10.3 0.1 2.4 1 1 1 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 ORF1329 - 0.048 13.5 0.4 1.7 8.4 0.4 2.3 1 1 0 1 1 1 0 alpha/beta hydrolase fold Chlorophyllase PF07224.11 ORF1329 - 0.062 12.3 0.0 0.099 11.6 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase MORN PF02493.20 ORF131532 - 0.00014 21.5 2.5 0.41 10.6 0.0 3.2 3 0 0 3 3 3 2 MORN repeat Pkinase PF00069.25 ORF129538 - 4.6e-51 173.7 0.0 5.4e-51 173.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF129538 - 7.2e-25 87.7 0.0 1.1e-24 87.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF129538 - 5.4e-08 32.5 0.0 6.7e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF129538 - 0.069 11.9 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Mito_carr PF00153.27 ORF128638 - 1.6e-57 191.4 2.7 2.6e-18 65.7 0.0 3.0 2 1 1 3 3 3 3 Mitochondrial carrier protein ATP12 PF07542.11 ORF127344 - 3.4e-16 59.5 0.2 5.5e-16 58.8 0.2 1.3 1 0 0 1 1 1 1 ATP12 chaperone protein HeLo PF14479.6 ORF127344 - 0.044 13.6 0.8 0.075 12.9 0.5 1.5 2 0 0 2 2 2 0 Prion-inhibition and propagation DUF5349 PF17298.2 ORF126679 - 0.47 10.2 2.8 0.51 10.1 0.2 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5349) Motile_Sperm PF00635.26 ORF123475 - 6.2e-22 77.5 1.2 6.2e-22 77.5 1.2 1.8 2 0 0 2 2 2 1 MSP (Major sperm protein) domain GPS2_interact PF15784.5 ORF123475 - 0.0051 17.2 4.6 0.011 16.2 4.6 1.5 1 0 0 1 1 1 1 G-protein pathway suppressor 2-interacting domain FAM75 PF14650.6 ORF119826 - 0.024 14.2 20.5 0.036 13.6 20.5 1.1 1 0 0 1 1 1 0 FAM75 family DUF2370 PF10176.9 ORF119826 - 0.14 11.8 0.5 0.27 10.9 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2370) CYSTM PF12734.7 ORF119826 - 0.4 11.0 0.1 0.4 11.0 0.1 3.8 2 1 0 2 2 2 0 Cysteine-rich TM module stress tolerance DUF3671 PF12420.8 ORF119826 - 9.5 6.3 9.0 3.1 7.9 4.6 2.4 1 1 1 2 2 2 0 Protein of unknown function SNARE_assoc PF09335.11 ORF117290 - 1.2e-10 41.9 6.1 1.2e-10 41.9 6.1 2.3 2 1 1 3 3 3 1 SNARE associated Golgi protein PIN_5 PF08745.11 ORF117290 - 0.11 11.9 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 PINc domain ribonuclease F-actin_cap_A PF01267.17 ORF113356 - 1.7e-51 175.2 2.4 2.2e-51 174.9 2.4 1.1 1 0 0 1 1 1 1 F-actin capping protein alpha subunit PhyH PF05721.13 ORF112958 - 1.3e-20 74.5 0.0 1.8e-20 74.1 0.0 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) EMC3_TMCO1 PF01956.16 ORF110720 - 0.014 15.2 0.2 0.024 14.4 0.2 1.4 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Palm_thioest PF02089.15 ORF110534 - 2.6e-57 194.5 0.0 3e-57 194.3 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF110534 - 0.00013 21.6 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DUF2974 PF11187.8 ORF110534 - 0.025 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 ORF110534 - 0.14 11.4 0.0 0.84 8.8 0.0 1.8 1 1 1 2 2 2 0 Serine aminopeptidase, S33 Pkinase PF00069.25 ORF105498 - 4.4e-61 206.6 0.0 5e-61 206.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105498 - 7.2e-31 107.4 0.0 9.4e-31 107.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF105498 - 3.1e-06 26.7 0.0 6.2e-06 25.7 0.0 1.5 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF105498 - 0.031 13.6 0.0 0.056 12.8 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Sam68-YY PF16568.5 ORF105498 - 0.25 12.1 3.5 0.59 10.9 0.9 2.3 2 0 0 2 2 2 0 Tyrosine-rich domain of Sam68 Brr6_like_C_C PF10104.9 ORF103230 - 2e-27 95.6 7.7 2e-27 95.6 7.7 1.4 2 0 0 2 2 2 1 Di-sulfide bridge nucleocytoplasmic transport domain bPH_1 PF08000.11 ORF103230 - 0.06 13.4 0.0 0.17 12.0 0.0 1.8 1 1 0 1 1 1 0 Bacterial PH domain Glyco_hydro_31 PF01055.26 NODE_23219_length_886_cov_480.601645_g17728_i2reverse_frame_1 - 4.4e-55 187.6 1.3 5.2e-55 187.4 1.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Glyco_hydro_31 PF01055.26 NODE_23217_length_886_cov_573.963572_g17728_i1reverse_frame_1 - 1.8e-56 192.2 1.7 2.1e-56 192.0 1.7 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Fer4_3 PF12798.7 NODE_23117_length_890_cov_3.423392_g17931_i0reverse_frame_3 - 2.4 9.3 9.0 15 6.8 0.2 3.6 2 1 0 2 2 2 0 4Fe-4S binding domain NOA36 PF06524.12 NODE_23117_length_890_cov_3.423392_g17931_i0forward_frame_3 - 5.9 6.1 14.0 4.6 6.5 12.4 1.5 1 1 0 1 1 1 0 NOA36 protein UCH PF00443.29 NODE_23073_length_891_cov_2.382009_g17894_i0forward_frame_2 - 5e-20 72.1 2.0 1.2e-19 70.9 0.5 1.9 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase ubiquitin PF00240.23 NODE_23073_length_891_cov_2.382009_g17894_i0forward_frame_2 - 3.2e-05 23.6 0.3 9.6e-05 22.1 0.3 1.8 1 0 0 1 1 1 1 Ubiquitin family DUF4275 PF14101.6 NODE_23073_length_891_cov_2.382009_g17894_i0forward_frame_2 - 0.0095 16.1 0.2 0.022 14.9 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4275) UCH_1 PF13423.6 NODE_23073_length_891_cov_2.382009_g17894_i0forward_frame_2 - 0.051 13.2 3.2 0.12 11.9 1.4 2.3 2 1 0 2 2 2 0 Ubiquitin carboxyl-terminal hydrolase HCO3_cotransp PF00955.21 ORF88981 - 6.3e-50 170.4 0.0 8.5e-50 170.0 0.0 1.0 1 0 0 1 1 1 1 HCO3- transporter family CRAL_TRIO PF00650.20 ORF85832 - 2.4e-20 72.9 0.0 3e-20 72.5 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain Cupin_1 PF00190.22 ORF81595 - 5.7e-15 55.2 0.4 9.5e-15 54.5 0.4 1.3 1 0 0 1 1 1 1 Cupin Cupin_2 PF07883.11 ORF81595 - 3.1e-08 33.2 0.1 6.5e-08 32.2 0.1 1.5 1 0 0 1 1 1 1 Cupin domain ARD PF03079.14 ORF81595 - 0.078 13.2 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 ARD/ARD' family AraC_binding PF02311.19 ORF81595 - 0.085 12.8 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain Abhydrolase_2 PF02230.16 ORF77881 - 3.2e-08 33.6 0.0 3.5e-07 30.2 0.0 2.1 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF77881 - 1.9e-06 28.7 0.2 2.8e-06 28.1 0.2 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family FSH1 PF03959.13 ORF77881 - 3.9e-06 26.7 0.0 1.9e-05 24.4 0.0 1.8 1 1 0 1 1 1 1 Serine hydrolase (FSH1) DLH PF01738.18 ORF77881 - 3.1e-05 23.6 0.0 5.5e-05 22.8 0.0 1.3 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 ORF77881 - 0.00017 20.9 1.5 0.12 11.6 0.2 3.0 2 1 1 3 3 3 1 Serine aminopeptidase, S33 Cutinase PF01083.22 ORF77881 - 0.046 13.7 0.0 0.075 13.0 0.0 1.3 1 0 0 1 1 1 0 Cutinase Abhydrolase_1 PF00561.20 ORF77881 - 0.049 13.3 0.0 0.23 11.1 0.0 1.9 1 1 1 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 ORF77881 - 0.051 13.7 0.0 0.094 12.8 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein PE-PPE PF08237.11 ORF77881 - 0.11 12.1 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 PE-PPE domain DUF2271 PF10029.9 ORF77881 - 0.14 11.8 0.1 0.22 11.2 0.1 1.2 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) Cupin_8 PF13621.6 ORF73880 - 8.1e-10 38.8 0.1 1.7e-09 37.7 0.1 1.5 1 1 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF73880 - 1.8e-05 24.4 0.0 3.5e-05 23.4 0.0 1.5 1 1 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 ORF73880 - 0.00036 20.9 0.0 0.0024 18.3 0.0 2.1 2 0 0 2 2 2 1 JmjC domain, hydroxylase Cupin_2 PF07883.11 ORF73880 - 0.0024 17.6 0.1 0.0088 15.7 0.0 2.0 2 0 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 ORF73880 - 0.0045 16.6 0.0 0.0067 16.0 0.0 1.4 1 0 0 1 1 1 1 Cupin IQ PF00612.27 ORF7167 - 0.00014 21.3 10.6 0.06 13.2 2.1 2.6 2 0 0 2 2 2 2 IQ calmodulin-binding motif DUF4383 PF14325.6 ORF65291 - 0.077 13.3 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4383) zf-C2HC_2 PF13913.6 ORF65107 - 2e-06 27.6 1.8 3.3e-06 26.8 1.8 1.4 1 0 0 1 1 1 1 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF65107 - 0.11 13.4 0.4 0.26 12.2 0.4 1.6 1 0 0 1 1 1 0 C2H2-type zinc finger Peripla_BP_4 PF13407.6 ORF64992 - 2.1e-58 198.0 11.8 2.4e-58 197.7 11.8 1.0 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 ORF64992 - 5.8e-27 94.8 2.4 7e-27 94.6 2.4 1.0 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 ORF64992 - 5.4e-16 59.4 0.1 2.7e-15 57.1 0.1 1.9 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_6 PF13458.6 ORF64992 - 2.1e-12 47.4 5.9 2.7e-12 47.0 4.8 1.6 1 1 1 2 2 2 1 Periplasmic binding protein PucR PF07905.11 ORF64992 - 0.0094 16.2 0.0 0.12 12.7 0.0 2.3 1 1 1 2 2 2 1 Purine catabolism regulatory protein-like family DUF4819 PF16090.5 ORF58996 - 2.7e-05 24.2 0.0 0.17 12.0 0.0 2.9 2 1 1 3 3 3 2 Domain of unknown function (DUF4819) Thioredoxin_8 PF13905.6 ORF58996 - 0.0012 19.1 0.0 0.0021 18.3 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like LBR_tudor PF09465.10 ORF58996 - 0.0014 18.4 0.2 0.043 13.6 0.1 2.8 3 0 0 3 3 3 1 Lamin-B receptor of TUDOR domain DUF1325 PF07039.11 ORF58996 - 0.044 13.9 0.1 14 5.8 0.0 3.1 2 1 1 3 3 3 0 SGF29 tudor-like domain PCAF_N PF06466.11 ORF58337 - 1.2 8.6 5.2 2.2 7.8 5.2 1.3 1 0 0 1 1 1 0 PCAF (P300/CBP-associated factor) N-terminal domain SPATA48 PF15073.6 ORF57635 - 0.055 13.8 1.3 0.36 11.1 0.0 2.3 2 0 0 2 2 2 0 Spermatogenesis-associated protein 48 MTHFR PF02219.17 ORF57457 - 1.3e-108 362.7 0.0 1.4e-108 362.6 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase BPD_transp_1 PF00528.22 ORF55707 - 1.9e-18 66.9 14.4 1.9e-18 66.9 14.4 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 ORF55707 - 3.3e-10 39.8 5.2 1.7e-09 37.5 0.0 3.3 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C Chal_sti_synt_N PF00195.19 ORF55707 - 0.038 13.4 0.0 0.098 12.1 0.0 1.6 2 0 0 2 2 2 0 Chalcone and stilbene synthases, N-terminal domain DUF4336 PF14234.6 ORF53761 - 1e-52 179.4 0.2 2.1e-38 132.3 0.0 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4336) BRO1 PF03097.18 ORF52389 - 2.9e-45 154.7 4.1 3.6e-45 154.4 4.1 1.0 1 0 0 1 1 1 1 BRO1-like domain DUF4441 PF14536.6 ORF51135 - 0.0061 16.8 12.8 0.0061 16.8 12.8 2.4 2 2 0 2 2 2 1 Domain of unknown function (DUF4441) Kelch_6 PF13964.6 ORF50555 - 2.7e-42 141.7 2.9 3.4e-09 36.7 0.0 6.4 3 2 3 6 6 6 6 Kelch motif Kelch_1 PF01344.25 ORF50555 - 2.2e-40 136.0 16.9 1.8e-11 43.4 0.2 6.7 6 1 0 6 6 6 5 Kelch motif Kelch_3 PF13415.6 ORF50555 - 6.8e-21 74.1 7.4 3.5e-05 24.0 0.1 6.0 6 0 0 6 6 6 5 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF50555 - 3.3e-16 58.5 4.0 0.028 14.4 0.1 6.2 6 0 0 6 6 6 5 Kelch motif Kelch_4 PF13418.6 ORF50555 - 3.9e-12 46.0 5.3 0.031 14.3 0.0 5.9 6 1 0 6 6 6 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF50555 - 3.2e-11 42.9 3.6 0.0041 17.1 0.2 4.9 5 0 0 5 5 5 3 Kelch motif DUF1668 PF07893.13 ORF50555 - 0.00097 18.6 0.4 0.2 11.0 0.1 2.8 1 1 2 3 3 3 2 Protein of unknown function (DUF1668) SHIPPO-rpt PF07004.12 ORF50267 - 0.0028 18.5 39.3 0.2 12.6 1.2 6.6 7 0 0 7 7 7 4 Sperm-tail PG-rich repeat DnaJ-X PF14308.6 ORF46032 - 2e-14 53.6 0.7 2e-14 53.6 0.7 2.0 1 1 1 2 2 2 1 X-domain of DnaJ-containing Tower PF09121.10 ORF46032 - 0.75 10.0 6.9 0.088 13.0 2.4 1.8 2 0 0 2 2 2 0 Tower EamA PF00892.20 ORF44707 - 5.4e-21 75.2 26.4 3.7e-13 49.8 7.5 2.1 2 0 0 2 2 2 2 EamA-like transporter family Sulfate_transp PF00916.20 ORF39497 - 7.1e-33 113.9 5.6 9.1e-33 113.5 5.6 1.1 1 0 0 1 1 1 1 Sulfate permease family STAS PF01740.21 ORF39497 - 7.5e-06 25.6 0.0 1.7e-05 24.4 0.0 1.6 2 0 0 2 2 2 1 STAS domain MFS_MOT1 PF16983.5 ORF39497 - 0.44 11.0 11.4 0.58 10.6 5.1 2.5 1 1 1 2 2 2 0 Molybdate transporter of MFS superfamily Transposase_31 PF04754.12 ORF37892 - 2.4e-90 301.6 0.1 3.1e-90 301.3 0.1 1.1 1 0 0 1 1 1 1 Putative transposase, YhgA-like NepR PF18557.1 ORF37892 - 0.033 13.8 0.4 0.67 9.6 0.1 2.7 2 0 0 2 2 2 0 Anti-sigma factor NepR p450 PF00067.22 ORF37239 - 7.9e-49 166.6 0.0 9.5e-49 166.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 N-glycanase_C PF09113.10 ORF35920 - 0.17 11.7 0.4 0.29 10.9 0.4 1.4 1 0 0 1 1 1 0 Peptide-N-glycosidase F, C terminal Pyr_redox_2 PF07992.14 ORF35828 - 3.6e-06 26.4 0.0 0.00087 18.6 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF35828 - 1.7e-05 24.3 0.0 0.00066 19.0 0.0 2.1 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF35828 - 0.00014 22.4 0.0 0.00042 20.8 0.0 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF35828 - 0.0028 17.3 0.2 0.64 9.5 0.1 2.1 1 1 1 2 2 2 2 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 ORF35828 - 0.0038 17.6 0.0 0.0079 16.6 0.0 1.5 1 1 0 1 1 1 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 ORF35828 - 0.0052 16.1 0.0 0.01 15.1 0.0 1.4 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain K_oxygenase PF13434.6 ORF35828 - 0.016 14.4 0.0 0.02 14.1 0.0 1.1 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) FAD_oxidored PF12831.7 ORF35828 - 0.055 12.8 0.2 0.091 12.1 0.2 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase GIDA PF01134.22 ORF35828 - 0.11 11.5 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Anoctamin PF04547.12 ORF3358 - 1.8e-14 53.4 7.0 2.4e-14 53.0 7.0 1.2 1 0 0 1 1 1 1 Calcium-activated chloride channel DUF2206 PF09971.9 ORF3358 - 0.043 12.6 2.1 2.5 6.8 0.0 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2206) Peptidase_C1 PF00112.23 ORF33238 - 1.7e-30 106.8 1.6 2.7e-30 106.1 1.6 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF33238 - 0.19 10.5 1.1 0.33 9.7 1.1 1.3 1 0 0 1 1 1 0 Peptidase C1-like family CemA PF03040.14 ORF32854 - 2 8.3 13.1 0.11 12.4 6.5 1.9 2 0 0 2 2 2 0 CemA family DAP10 PF07213.11 ORF30936 - 1.4 9.0 5.5 4.4 7.3 3.7 2.5 1 1 1 2 2 2 0 DAP10 membrane protein Glyco_hydro_18 PF00704.28 ORF27642 - 3e-61 207.8 0.0 3.8e-61 207.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 Glyco_hydro_114 PF03537.13 ORF27642 - 0.13 11.6 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 Glycoside-hydrolase family GH114 Peptidase_C1 PF00112.23 ORF21176 - 2.6e-57 194.4 8.1 3.3e-57 194.1 8.1 1.1 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 ORF21176 - 0.0039 16.0 0.3 0.31 9.7 0.1 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Pkinase PF00069.25 ORF19177 - 4e-43 147.7 0.0 4.6e-43 147.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF19177 - 5.6e-22 78.3 0.0 7e-22 78.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF19177 - 2.7e-07 30.2 0.0 3.8e-07 29.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like MotY_N PF18393.1 ORF17727 - 0.14 12.3 1.5 0.68 10.1 0.1 2.3 2 0 0 2 2 2 0 MotY N-terminal domain Ank_2 PF12796.7 ORF17057 - 4.2e-45 152.2 0.4 1.5e-12 47.9 0.0 4.6 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank PF00023.30 ORF17057 - 3.3e-33 112.7 1.8 9.1e-06 25.9 0.1 7.2 7 0 0 7 7 7 6 Ankyrin repeat Ank_5 PF13857.6 ORF17057 - 2.6e-28 97.7 4.5 2.5e-07 30.8 0.0 5.8 2 2 4 6 6 6 6 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF17057 - 6e-28 96.8 0.4 4.1e-08 33.6 0.0 4.9 3 2 2 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF17057 - 6.4e-24 81.4 0.0 0.0035 17.7 0.0 8.1 8 0 0 8 8 8 5 Ankyrin repeat Peptidase_C1 PF00112.23 ORF140727 - 4.3e-63 213.3 9.4 5.1e-63 213.1 9.4 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Propeptide_C1 PF08127.13 ORF140727 - 0.001 18.9 0.0 0.0047 16.8 0.0 2.1 2 1 0 2 2 2 1 Peptidase family C1 propeptide Peptidase_C1_2 PF03051.15 ORF140727 - 0.019 13.8 3.5 1.9 7.2 0.1 2.9 2 1 1 3 3 3 0 Peptidase C1-like family Peptidase_C2 PF00648.21 ORF140727 - 0.029 13.4 0.1 0.038 13.0 0.1 1.2 1 0 0 1 1 1 0 Calpain family cysteine protease HRM PF02793.22 ORF140727 - 0.87 9.9 6.5 0.8 10.0 1.6 2.4 2 0 0 2 2 2 0 Hormone receptor domain Mito_carr PF00153.27 ORF140079 - 3.2e-23 81.5 2.5 2.1e-08 33.9 0.1 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein Ribosomal_S17e PF00833.18 ORF140079 - 0.12 12.3 0.5 0.65 9.9 0.0 2.1 2 0 0 2 2 2 0 Ribosomal S17 CSD PF00313.22 ORF139509 - 2.7e-07 30.3 1.8 6.6e-07 29.1 1.8 1.7 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OTCace PF00185.24 ORF139509 - 0.013 15.5 1.4 0.17 12.0 0.7 2.3 2 0 0 2 2 2 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OB_RNB PF08206.11 ORF139509 - 0.088 12.5 3.5 0.17 11.6 3.5 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain DUF150_C PF17384.2 ORF139509 - 0.12 12.5 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 RimP C-terminal SH3 domain SCIMP PF15050.6 ORF139509 - 0.61 10.5 5.7 0.57 10.6 4.6 1.5 1 1 0 1 1 1 0 SCIMP protein CCDC84 PF14968.6 ORF139509 - 2.1 7.9 9.8 3.3 7.2 9.8 1.3 1 0 0 1 1 1 0 Coiled coil protein 84 Porin_3 PF01459.22 ORF137328 - 9.8e-13 48.2 0.0 1.1e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic porin PEP_mutase PF13714.6 ORF137307 - 1.7e-49 168.4 4.2 2.1e-49 168.1 4.2 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.21 ORF137307 - 2.3e-14 52.8 0.5 4e-14 52.0 0.5 1.3 1 0 0 1 1 1 1 Isocitrate lyase family DUF4441 PF14536.6 ORF132954 - 0.0091 16.2 16.3 0.0091 16.2 16.3 3.1 2 1 0 2 2 2 1 Domain of unknown function (DUF4441) WD40 PF00400.32 ORF130765 - 4.5e-05 24.1 2.7 2 9.4 0.0 4.7 5 0 0 5 5 5 3 WD domain, G-beta repeat TRP PF06011.12 ORF128977 - 3.9e-05 22.6 23.0 4.7e-05 22.3 23.0 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel HemY_N PF07219.13 ORF128977 - 0.0085 16.3 4.8 1.4 9.1 0.0 2.8 3 0 0 3 3 3 2 HemY protein N-terminus OAD_gamma PF04277.13 ORF128977 - 0.022 15.3 1.2 1 10.0 0.0 2.5 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Vpu PF00558.19 ORF128977 - 0.023 14.4 3.4 0.023 14.4 3.4 3.0 3 1 0 3 3 2 0 Vpu protein DUF3328 PF11807.8 ORF128977 - 0.095 12.5 0.0 2.1 8.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3328) TMEM154 PF15102.6 ORF128977 - 0.38 10.7 8.1 0.62 10.0 1.8 2.2 2 0 0 2 2 2 0 TMEM154 protein family LRR19-TM PF15176.6 ORF128977 - 0.38 10.8 1.6 7.5 6.6 0.5 2.3 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain EphA2_TM PF14575.6 ORF128977 - 0.81 10.6 7.3 5.9 7.9 0.9 3.0 3 0 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain DUF3262 PF11660.8 ORF128977 - 1.6 9.1 10.5 1.5 9.3 0.3 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3262) NB PF04159.13 ORF128977 - 1.6 8.8 6.8 5.9 7.0 1.3 2.5 2 0 0 2 2 2 0 NB glycoprotein Ycf70 PF17382.2 ORF128977 - 2.4 8.6 6.5 5.6 7.4 1.6 2.9 2 1 1 3 3 3 0 Uncharacterized Ycf70-like EVI2A PF05399.11 ORF128977 - 2.7 7.5 5.4 0.87 9.1 1.3 2.0 2 0 0 2 2 2 0 Ectropic viral integration site 2A protein (EVI2A) Sigma_reg_N PF13800.6 ORF128977 - 7.1 7.0 21.3 0.056 13.7 2.5 3.4 4 1 0 4 4 4 0 Sigma factor regulator N-terminal SH3_2 PF07653.17 ORF125747 - 2.7e-10 39.8 0.0 0.00023 20.8 0.0 2.2 2 0 0 2 2 2 2 Variant SH3 domain SH3_9 PF14604.6 ORF125747 - 1.7e-07 31.0 0.1 0.0058 16.5 0.0 2.5 2 0 0 2 2 2 2 Variant SH3 domain SH3_1 PF00018.28 ORF125747 - 1.3e-05 24.7 0.3 0.014 14.9 0.0 2.7 2 1 0 2 2 2 2 SH3 domain DUF4453 PF14627.6 ORF125747 - 0.014 15.5 0.0 0.41 10.8 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4453) SUI1 PF01253.22 ORF124556 - 2.1e-15 57.0 0.3 2.1e-15 57.0 0.3 2.2 2 0 0 2 2 2 1 Translation initiation factor SUI1 DUF4441 PF14536.6 ORF120390 - 0.0013 18.9 18.5 0.015 15.5 18.5 2.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4441) Cation_ATPase_C PF00689.21 ORF120236 - 0.58 9.8 6.9 0.73 9.5 4.2 2.1 1 1 1 2 2 2 0 Cation transporting ATPase, C-terminus CSRNP_N PF16019.5 ORF114624 - 6.9 6.5 10.3 0.18 11.7 3.7 1.6 2 0 0 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus Abhydrolase_2 PF02230.16 ORF10829 - 1.2e-06 28.5 0.0 2.8e-06 27.3 0.0 1.6 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase DUF2974 PF11187.8 ORF10829 - 0.015 14.9 0.0 0.019 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Cutinase PF01083.22 ORF10829 - 0.018 15.0 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Cutinase PE-PPE PF08237.11 ORF10829 - 0.026 14.1 0.0 0.037 13.6 0.0 1.2 1 0 0 1 1 1 0 PE-PPE domain DUF3089 PF11288.8 ORF10829 - 0.12 11.9 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) Hydrolase_4 PF12146.8 ORF10829 - 0.14 11.4 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Lipase_3 PF01764.25 ORF10829 - 0.16 11.8 0.0 0.65 9.9 0.0 2.0 1 1 0 1 1 1 0 Lipase (class 3) Cation_ATPase_C PF00689.21 ORF107965 - 0.58 9.8 6.9 0.73 9.5 4.2 2.1 1 1 1 2 2 2 0 Cation transporting ATPase, C-terminus Peripla_BP_1 PF00532.21 ORF104908 - 2.7e-14 53.3 0.0 3.3e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Peripla_BP_3 PF13377.6 ORF104908 - 5.2e-11 43.2 0.1 1.1e-09 38.9 0.0 2.1 2 0 0 2 2 2 1 Periplasmic binding protein-like domain Peripla_BP_4 PF13407.6 ORF104908 - 1.4e-09 37.9 0.0 1.7e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein domain DUF4543 PF15076.6 ORF104908 - 0.0021 18.2 0.8 0.0056 16.8 0.2 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4543) LysR_substrate PF03466.20 ORF104908 - 0.015 14.7 1.7 3.1 7.1 0.0 3.1 2 1 1 3 3 3 0 LysR substrate binding domain CSRNP_N PF16019.5 ORF101724 - 6.9 6.5 10.3 0.18 11.7 3.7 1.6 2 0 0 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus Polo_box_3 PF18544.1 NODE_23258_length_885_cov_102.747059_g18043_i0forward_frame_1 - 0.041 14.5 1.0 0.17 12.5 0.2 2.3 2 0 0 2 2 2 0 Polo box domain Herpes_TAF50 PF03326.13 NODE_23236_length_886_cov_2.398355_g18027_i0reverse_frame_3 - 0.099 11.3 0.1 0.14 10.8 0.1 1.1 1 0 0 1 1 1 0 Herpesvirus transcription activation factor (transactivator) FlaF PF07309.11 NODE_23236_length_886_cov_2.398355_g18027_i0reverse_frame_2 - 0.052 13.6 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Flagellar protein FlaF Syndecan PF01034.20 NODE_23219_length_886_cov_480.601645_g17728_i2forward_frame_2 - 1 9.3 4.2 2.3 8.2 0.8 2.5 2 0 0 2 2 2 0 Syndecan domain Syndecan PF01034.20 NODE_23217_length_886_cov_573.963572_g17728_i1forward_frame_2 - 1 9.3 4.2 2.3 8.2 0.8 2.5 2 0 0 2 2 2 0 Syndecan domain 2-Hacid_dh_C PF02826.19 ORF95899 - 4.3e-50 169.5 0.0 6e-50 169.1 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF95899 - 0.0072 16.5 0.0 0.013 15.7 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Helicase_C PF00271.31 ORF93121 - 6.2e-09 36.2 0.2 1.6e-08 34.9 0.2 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain TruD PF01142.18 ORF93121 - 0.025 13.4 1.4 0.04 12.8 1.1 1.4 2 0 0 2 2 2 0 tRNA pseudouridine synthase D (TruD) PI3_PI4_kinase PF00454.27 ORF86958 - 1e-34 120.5 0.6 2.6e-25 89.7 0.5 2.2 1 1 1 2 2 2 2 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 ORF86958 - 0.01 15.2 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) ABATE PF07336.11 ORF78666 - 7.6 7.2 9.3 22 5.7 9.3 2.0 1 1 0 1 1 1 0 Putative stress-induced transcription regulator TPR_12 PF13424.6 ORF76734 - 1.6e-28 98.8 7.4 1.9e-11 44.1 0.0 3.8 2 1 2 4 4 4 4 Tetratricopeptide repeat TPR_10 PF13374.6 ORF76734 - 3.4e-18 64.9 0.0 1.9e-06 27.6 0.0 5.0 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF76734 - 2.6e-14 52.1 10.8 8.9e-05 22.4 0.1 5.6 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_1 PF00515.28 ORF76734 - 1.4e-13 50.0 14.0 4e-06 26.4 0.1 6.5 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF76734 - 2.1e-11 43.0 8.7 0.00075 19.4 0.1 5.8 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF76734 - 9.5e-11 41.0 12.8 0.0025 17.8 0.1 6.2 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF76734 - 5.3e-08 33.0 0.1 0.69 10.9 0.0 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF76734 - 1.4e-06 27.9 0.4 0.0032 16.9 0.0 2.1 1 1 1 2 2 2 2 MalT-like TPR region TPR_6 PF13174.6 ORF76734 - 3.3e-06 27.4 7.8 0.14 12.8 0.1 5.8 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF76734 - 0.00011 22.8 2.6 0.7 10.6 0.7 3.7 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF76734 - 0.00092 19.7 2.7 1.5 9.3 0.0 4.2 3 1 1 4 4 4 1 Tetratricopeptide repeat DUF2225 PF09986.9 ORF76734 - 0.011 15.5 3.3 0.026 14.2 3.1 1.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) MIT PF04212.18 ORF76734 - 0.022 14.8 5.8 3.7 7.7 0.3 4.0 3 1 2 5 5 5 0 MIT (microtubule interacting and transport) domain ANAPC3 PF12895.7 ORF76734 - 0.036 14.3 13.4 0.051 13.8 7.2 4.0 2 2 1 4 4 4 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 ORF76734 - 0.075 13.5 7.2 98 3.7 0.0 5.9 7 0 0 7 7 6 0 Tetratricopeptide repeat TPR_11 PF13414.6 ORF76734 - 0.097 12.4 4.9 0.78 9.5 0.2 3.8 4 0 0 4 4 4 0 TPR repeat Nepo_coat_N PF03689.15 ORF74163 - 0.52 10.3 2.3 4.6 7.3 0.2 2.7 2 1 1 3 3 3 0 Nepovirus coat protein, N-terminal domain T2SSL PF05134.13 ORF73079 - 0.0085 15.5 0.8 0.014 14.8 0.7 1.4 1 1 0 1 1 1 1 Type II secretion system (T2SS), protein L PilM_2 PF11104.8 ORF73079 - 0.029 13.4 0.0 0.14 11.2 0.0 1.9 2 0 0 2 2 2 0 Type IV pilus assembly protein PilM; MotA_ExbB PF01618.16 ORF66850 - 7.2e-34 116.3 0.9 1.6e-33 115.2 0.9 1.6 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family DUF3566 PF12089.8 ORF66850 - 0.12 12.8 5.9 0.14 12.5 2.6 2.2 2 0 0 2 2 2 0 Transmembrane domain of unknown function (DUF3566) LapA_dom PF06305.11 ORF66850 - 1.1 9.1 4.5 0.44 10.4 0.5 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain CBM_20 PF00686.19 ORF60410 - 4.1e-19 68.3 0.0 8.3e-19 67.3 0.0 1.5 1 0 0 1 1 1 1 Starch binding domain TPR_2 PF07719.17 ORF60175 - 3.6e-07 29.8 6.4 0.00057 19.8 0.0 3.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF60175 - 5.5e-07 29.1 5.1 0.00066 19.4 0.0 3.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF60175 - 0.0011 18.6 0.1 0.72 9.6 0.0 2.7 3 0 0 3 3 3 2 TPR repeat TPR_12 PF13424.6 ORF60175 - 0.01 16.1 10.4 0.018 15.3 0.0 3.3 2 1 0 3 3 3 0 Tetratricopeptide repeat TPR_9 PF13371.6 ORF60175 - 0.015 15.5 1.9 0.015 15.5 1.9 3.6 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF60175 - 0.093 13.6 0.0 0.093 13.6 0.0 4.9 4 1 0 5 5 5 0 Tetratricopeptide repeat CPSase_L_D3 PF02787.19 ORF60175 - 0.2 12.0 0.0 0.3 11.5 0.0 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Microvir_J PF04726.13 ORF52755 - 1.5 8.9 4.2 0.64 10.0 0.8 2.0 2 0 0 2 2 2 0 Microvirus J protein Pkinase PF00069.25 ORF51958 - 5.8e-40 137.3 0.5 8.9e-40 136.7 0.5 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF51958 - 2.2e-28 99.3 0.1 3.7e-28 98.5 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF51958 - 3.4e-05 23.3 0.1 8.1e-05 22.1 0.0 1.6 2 0 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF51958 - 0.0027 16.6 0.0 0.0043 15.9 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase DUF309 PF03745.14 ORF51958 - 0.023 14.4 0.0 0.041 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF309) Pathogen_betaC1 PF09593.10 ORF51958 - 0.095 12.6 0.2 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Beta-satellite pathogenicity beta C1 protein Aminotran_4 PF01063.19 ORF48388 - 1.1e-50 172.6 0.0 1.3e-50 172.4 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV G-gamma PF00631.22 ORF48388 - 0.18 11.8 0.0 0.37 10.8 0.0 1.4 1 0 0 1 1 1 0 GGL domain EamA PF00892.20 ORF47774 - 1.4e-21 77.1 36.4 6.6e-18 65.2 14.3 2.2 2 0 0 2 2 2 2 EamA-like transporter family Tetraspanin PF00335.20 ORF45302 - 5.1e-07 29.6 21.0 1.7e-06 27.9 20.0 2.5 1 1 0 1 1 1 1 Tetraspanin family DUF313 PF03754.13 ORF38831 - 0.00067 19.9 4.6 0.0049 17.1 0.2 2.5 1 1 0 2 2 2 2 Domain of unknown function (DUF313) CHASE PF03924.13 ORF38831 - 0.051 13.5 0.2 0.079 12.9 0.2 1.3 1 0 0 1 1 1 0 CHASE domain DUF4202 PF13875.6 ORF37582 - 0.01 15.7 0.1 0.015 15.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4202) Pkinase PF00069.25 ORF36058 - 4.6e-31 108.1 5.8 1.2e-30 106.8 0.2 3.0 1 1 1 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF36058 - 6.1e-15 55.2 2.9 9.8e-07 28.3 0.0 2.5 2 1 1 3 3 3 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF36058 - 0.025 13.9 0.0 0.93 8.7 0.0 2.4 2 0 0 2 2 2 0 Kinase-like Lipoprot_C PF08794.10 ORF36058 - 0.083 12.9 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Lipoprotein GNA1870 C terminal like APH PF01636.23 ORF36058 - 0.23 11.3 0.0 0.36 10.7 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Neur_chan_memb PF02932.16 ORF30658 - 0.025 14.7 3.8 0.034 14.2 3.8 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Neur_chan_LBD PF02931.23 ORF30658 - 0.11 11.9 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel ligand binding domain R2K_3 PF14243.6 ORF25012 - 0.07 13.1 0.4 9.8 6.1 0.1 2.2 2 0 0 2 2 2 0 ATP-grasp domain, R2K clade family 3 Spc7 PF08317.11 ORF25012 - 0.076 11.9 29.6 0.035 13.0 11.3 3.0 1 1 2 3 3 3 0 Spc7 kinetochore protein Nif11 PF07862.11 ORF25012 - 0.46 10.8 0.2 0.46 10.8 0.2 3.2 3 0 0 3 3 3 0 Nif11 domain NPV_P10 PF05531.12 ORF25012 - 2 8.9 5.2 26 5.4 0.3 3.5 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein Fez1 PF06818.15 ORF25012 - 2.8 8.3 28.1 1 9.8 12.3 2.8 1 1 2 3 3 3 0 Fez1 CENP-F_leu_zip PF10473.9 ORF25012 - 9.5 6.2 34.1 3.1 7.8 8.4 3.7 2 2 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 p450 PF00067.22 ORF15704 - 2.5e-47 161.7 0.0 3.1e-47 161.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 HOOK PF05622.12 ORF150201 - 1.4e-10 40.0 10.8 2.9e-10 39.0 10.8 1.6 1 1 0 1 1 1 1 HOOK protein CH PF00307.31 ORF150201 - 3.4e-05 24.0 0.1 3.4e-05 24.0 0.1 2.5 2 1 0 3 3 3 1 Calponin homology (CH) domain zf-RING_2 PF13639.6 ORF147433 - 1.2e-10 41.5 6.1 3.2e-10 40.2 6.1 1.8 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF147433 - 4.1e-09 36.2 7.3 1.2e-08 34.7 7.3 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF147433 - 1.3e-08 34.5 6.5 3.7e-08 33.1 6.5 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF147433 - 1.2e-07 31.5 4.5 3.1e-07 30.1 4.5 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF147433 - 5.9e-07 29.1 4.7 2.1e-06 27.3 2.6 2.6 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF147433 - 5.1e-05 23.5 7.5 0.00029 21.0 7.5 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF147433 - 0.00014 22.0 3.9 0.00014 22.0 3.9 2.3 2 1 0 2 2 1 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF147433 - 0.00021 21.2 6.1 0.00072 19.5 6.1 2.0 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF147433 - 0.00093 19.0 3.8 0.0021 17.9 3.8 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF147433 - 0.001 19.1 1.1 0.001 19.1 1.1 2.8 3 0 0 3 3 3 1 RING-type zinc-finger Rad50_zn_hook PF04423.14 ORF147433 - 0.028 14.2 0.1 0.066 13.1 0.1 1.6 1 0 0 1 1 1 0 Rad50 zinc hook motif zf-ANAPC11 PF12861.7 ORF147433 - 0.078 13.0 3.7 0.26 11.4 3.4 2.0 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-HC5HC2H PF13771.6 ORF147433 - 0.18 12.0 4.1 0.97 9.7 2.8 2.4 1 1 1 2 2 2 0 PHD-like zinc-binding domain zf-C2HC_2 PF13913.6 ORF147433 - 1.8 8.6 6.3 0.22 11.5 1.2 2.1 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-RING_4 PF14570.6 ORF147433 - 2.4 8.0 10.3 0.19 11.5 4.7 2.1 2 1 0 2 2 2 0 RING/Ubox like zinc-binding domain CoA_trans PF01144.23 ORF145710 - 9.4e-51 172.3 1.7 1.6e-38 132.3 0.3 2.0 2 0 0 2 2 2 2 Coenzyme A transferase DeoRC PF00455.22 ORF145710 - 0.0075 16.2 0.0 0.072 13.0 0.0 2.3 2 0 0 2 2 2 1 DeoR C terminal sensor domain AcetylCoA_hyd_C PF13336.6 ORF145710 - 0.055 13.4 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase C-terminal domain DUF3130 PF11328.8 ORF145378 - 0.032 14.5 0.0 0.098 12.9 0.0 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3130 DUF4302 PF14135.6 ORF145378 - 0.079 12.9 0.3 0.17 11.7 0.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4302) Spermine_synth PF01564.17 ORF145378 - 0.095 12.1 2.5 0.13 11.6 0.8 2.3 1 1 1 2 2 2 0 Spermine/spermidine synthase domain Bystin PF05291.11 ORF14055 - 8.6e-50 169.7 1.1 8.6e-50 169.7 1.1 2.2 2 0 0 2 2 2 1 Bystin DUF1415 PF07209.12 ORF140174 - 2.3e-23 82.8 0.0 3.1e-15 56.3 0.0 2.4 3 0 0 3 3 3 2 Protein of unknown function (DUF1415) Bunya_NS-S PF01104.17 ORF139869 - 0.39 10.6 8.3 1.3 8.9 0.0 3.2 3 0 0 3 3 3 0 Bunyavirus non-structural protein NS-s Acyltransferase PF01553.21 ORF137022 - 7.2e-15 54.8 0.1 1.4e-14 53.8 0.0 1.5 2 0 0 2 2 2 1 Acyltransferase BID PF06393.11 ORF137022 - 0.18 11.3 0.3 0.33 10.5 0.1 1.5 2 0 0 2 2 2 0 BH3 interacting domain (BID) EutC PF05985.11 ORF136645 - 7.6e-79 264.3 0.1 9.3e-79 264.0 0.1 1.1 1 0 0 1 1 1 1 Ethanolamine ammonia-lyase light chain (EutC) TANGO2 PF05742.12 ORF136645 - 0.045 13.8 0.0 0.059 13.4 0.0 1.2 1 0 0 1 1 1 0 Transport and Golgi organisation 2 CLZ PF16526.5 ORF13662 - 0.041 14.3 14.9 0.37 11.2 0.4 4.1 3 1 1 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF2046 PF09755.9 ORF13662 - 0.055 12.7 19.1 0.74 9.0 8.9 2.6 1 1 1 2 2 2 0 Uncharacterized conserved protein H4 (DUF2046) AKNA PF12443.8 ORF13662 - 0.089 13.4 7.8 0.18 12.5 0.4 3.2 3 0 0 3 3 3 0 AT-hook-containing transcription factor TSC22 PF01166.18 ORF13662 - 0.11 12.8 5.2 2.8 8.3 0.0 3.8 3 1 0 3 3 3 0 TSC-22/dip/bun family TMF_TATA_bd PF12325.8 ORF13662 - 0.15 12.3 22.5 0.81 9.9 0.0 3.2 2 1 1 3 3 3 0 TATA element modulatory factor 1 TATA binding NPV_P10 PF05531.12 ORF13662 - 0.18 12.3 3.9 12 6.4 0.0 3.3 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF4200 PF13863.6 ORF13662 - 0.25 11.8 22.2 2.7 8.4 11.6 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) PspA_IM30 PF04012.12 ORF13662 - 0.57 9.7 28.3 0.19 11.3 24.5 2.1 1 1 1 2 2 2 0 PspA/IM30 family DUF1319 PF07028.11 ORF13662 - 0.72 10.1 5.3 4 7.7 1.5 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1319) ABC_tran_CTD PF16326.5 ORF13662 - 0.81 10.0 25.0 5.9 7.2 0.0 4.1 2 1 1 3 3 3 0 ABC transporter C-terminal domain Prefoldin_2 PF01920.20 ORF13662 - 1.5 8.8 20.3 23 5.0 0.2 4.2 2 1 1 3 3 3 0 Prefoldin subunit GAS PF13851.6 ORF13662 - 1.5 8.1 21.9 0.95 8.8 2.0 3.2 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding bZIP_2 PF07716.15 ORF13662 - 1.9 8.6 21.7 0.51 10.5 1.6 4.6 3 1 0 4 4 4 0 Basic region leucine zipper Swi5 PF07061.11 ORF13662 - 2.4 8.3 15.5 22 5.2 0.5 4.2 3 1 0 3 3 3 0 Swi5 DUF4795 PF16043.5 ORF13662 - 3 7.4 16.8 14 5.3 14.7 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4795) Fes1 PF08609.10 ORF13662 - 3.5 8.6 8.6 4 8.4 0.1 2.8 1 1 1 2 2 2 0 Nucleotide exchange factor Fes1 FlaC_arch PF05377.11 ORF13662 - 5 7.6 7.7 36 4.9 0.5 3.7 4 0 0 4 4 4 0 Flagella accessory protein C (FlaC) ERM PF00769.19 ORF13662 - 5.1 6.8 29.1 9.3 6.0 29.1 1.4 1 1 0 1 1 1 0 Ezrin/radixin/moesin family Pox_A_type_inc PF04508.12 ORF13662 - 7.5 6.6 10.6 13 5.8 0.4 3.9 5 0 0 5 5 4 0 Viral A-type inclusion protein repeat LPP PF04728.13 ORF13662 - 7.5 7.0 14.6 26 5.3 0.0 3.9 3 1 0 3 3 3 0 Lipoprotein leucine-zipper Paralemmin PF03285.15 ORF13662 - 8.5 5.9 19.2 0.24 10.9 9.0 2.4 2 1 1 3 3 3 0 Paralemmin DUF4472 PF14739.6 ORF13662 - 9.4 7.0 20.8 13 6.6 7.6 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4472) Ax_dynein_light PF10211.9 ORF13662 - 9.7 6.1 20.2 30 4.5 4.5 3.5 2 1 1 3 3 3 0 Axonemal dynein light chain ART PF01129.18 ORF135148 - 7.4e-07 28.7 0.0 1.5e-06 27.7 0.0 1.6 1 1 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase Band_7 PF01145.25 ORF132305 - 1.5e-26 93.5 0.5 7.5e-26 91.2 0.4 2.0 2 0 0 2 2 2 1 SPFH domain / Band 7 family Med2 PF11214.8 ORF132305 - 0.076 13.2 2.4 0.15 12.2 2.4 1.5 1 0 0 1 1 1 0 Mediator complex subunit 2 DUF3334 PF11813.8 ORF132305 - 0.15 11.8 1.0 0.21 11.3 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3334) Transglut_core PF01841.19 ORF129124 - 2.1e-05 24.9 0.0 7.2e-05 23.2 0.0 1.8 1 1 0 1 1 1 1 Transglutaminase-like superfamily Methyltransf_31 PF13847.6 ORF128635 - 0.13 12.1 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_2 PF00891.18 ORF128635 - 0.18 11.1 0.0 0.25 10.6 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain FAM221 PF14753.6 ORF124290 - 9.6e-58 195.0 12.8 1.3e-57 194.5 12.8 1.1 1 0 0 1 1 1 1 Protein FAM221A/B Pyrid_ox_like PF16242.5 ORF124111 - 0.003 17.2 0.0 0.0047 16.5 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Enkurin PF13864.6 ORF119550 - 7.4e-20 71.2 2.2 1.1e-19 70.6 2.2 1.3 1 0 0 1 1 1 1 Calmodulin-binding AAA_21 PF13304.6 ORF117916 - 4e-10 40.0 0.1 1.5e-08 34.8 0.0 2.4 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 ORF117916 - 3.3e-07 30.9 0.4 1.6e-06 28.7 0.0 2.2 2 1 0 2 2 2 1 ABC transporter DUF4162 PF13732.6 ORF117916 - 0.03 15.0 2.1 1.5 9.6 2.2 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4162) RNA_pol_Rpb5_N PF03871.14 ORF117916 - 0.046 14.3 1.6 1.3 9.7 0.0 2.8 3 0 0 3 3 3 0 RNA polymerase Rpb5, N-terminal domain CCDC92 PF14916.6 ORF116307 - 0.0008 19.1 0.6 0.0031 17.2 0.6 2.0 1 0 0 1 1 1 1 Coiled-coil domain of unknown function MotA_ExbB PF01618.16 ORF114049 - 7.2e-34 116.3 0.9 1.6e-33 115.2 0.9 1.6 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family DUF3566 PF12089.8 ORF114049 - 0.12 12.8 5.9 0.14 12.5 2.6 2.2 2 0 0 2 2 2 0 Transmembrane domain of unknown function (DUF3566) LapA_dom PF06305.11 ORF114049 - 1.1 9.1 4.5 0.44 10.4 0.5 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Aminotran_5 PF00266.19 ORF113876 - 3.2e-10 39.5 0.0 3.7e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 ORF113876 - 0.011 15.1 0.3 0.015 14.6 0.3 1.1 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 ORF113876 - 0.17 10.4 0.0 0.23 9.9 0.0 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme NAM-associated PF14303.6 ORF111230 - 0.028 15.1 11.9 0.28 11.9 1.1 2.5 2 1 0 2 2 2 0 No apical meristem-associated C-terminal domain DUF4494 PF14902.6 ORF111230 - 0.054 13.3 0.6 0.16 11.8 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4494) Noelin-1 PF12308.8 ORF111230 - 0.19 11.7 4.4 0.39 10.7 0.0 3.2 3 1 0 3 3 3 0 Neurogenesis glycoprotein USP8_interact PF08941.10 ORF111230 - 0.31 10.8 7.4 1.1 9.0 0.1 3.3 3 0 0 3 3 3 0 USP8 interacting DUF4164 PF13747.6 ORF111230 - 0.44 10.9 0.1 0.44 10.9 0.1 4.0 4 1 0 4 4 4 0 Domain of unknown function (DUF4164) SlyX PF04102.12 ORF111230 - 1 10.0 19.2 0.74 10.5 0.5 4.9 4 2 1 5 5 5 0 SlyX DUF4407 PF14362.6 ORF111230 - 1.2 8.5 10.3 1.1e+02 2.0 10.3 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) CorA PF01544.18 ORF111230 - 1.3 8.2 6.8 1.5 8.1 0.2 2.3 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein BRE1 PF08647.11 ORF111230 - 2.5 8.2 29.1 0.071 13.2 4.6 4.9 5 0 0 5 5 5 0 BRE1 E3 ubiquitin ligase Phage_lysis PF03245.13 ORF111230 - 3.2 7.9 8.6 11 6.1 0.2 3.8 3 1 0 3 3 3 0 Bacteriophage Rz lysis protein DUF4140 PF13600.6 ORF111230 - 4.5 7.8 11.0 27 5.3 0.2 4.1 3 1 1 4 4 4 0 N-terminal domain of unknown function (DUF4140) CENP-F_leu_zip PF10473.9 ORF111230 - 4.6 7.3 30.5 0.38 10.8 4.6 3.7 3 1 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 XhlA PF10779.9 ORF111230 - 8.6 6.7 9.0 27 5.1 0.4 3.5 3 0 0 3 3 3 0 Haemolysin XhlA Tropomyosin_1 PF12718.7 ORF111230 - 9.6 6.3 25.1 2.4 8.3 1.5 3.6 3 1 0 3 3 3 0 Tropomyosin like DUF1295 PF06966.12 ORF106987 - 6.5e-62 209.1 9.7 7.8e-62 208.9 9.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF106987 - 1.1e-07 32.2 0.4 1.1e-07 32.2 0.4 2.6 2 2 0 2 2 2 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF106987 - 1.5e-05 25.0 8.1 1.6e-05 24.9 6.9 1.8 1 1 1 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF106987 - 0.00034 21.0 1.7 0.00041 20.7 0.1 2.0 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PIRT PF15099.6 ORF106987 - 0.011 15.3 0.4 0.13 11.9 0.4 2.8 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family DHHC PF01529.20 ORF106987 - 0.27 11.4 2.7 0.35 11.0 0.6 2.2 1 1 1 2 2 2 0 DHHC palmitoyltransferase Lipase_3 PF01764.25 ORF106980 - 4.4e-12 46.1 0.0 6.1e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF3089 PF11288.8 ORF106980 - 0.093 12.3 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) Abhydrolase_6 PF12697.7 ORF106980 - 0.099 13.2 2.3 0.16 12.6 2.3 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family FemAB PF02388.16 ORF103427 - 0.32 9.8 6.7 0.53 9.1 6.7 1.3 1 0 0 1 1 1 0 FemAB family DUF5446 PF17522.2 ORF103427 - 1.8 8.8 10.7 1.1 9.4 5.4 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5446) ArfGap PF01412.18 ORF103427 - 7.7 6.6 6.9 2.5 8.2 3.8 1.7 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf DUF1295 PF06966.12 ORF103129 - 6.5e-62 209.1 9.7 7.8e-62 208.9 9.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF103129 - 1.1e-07 32.2 0.4 1.1e-07 32.2 0.4 2.6 2 2 0 2 2 2 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF103129 - 1.5e-05 25.0 8.1 1.6e-05 24.9 6.9 1.8 1 1 1 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF103129 - 0.00034 21.0 1.7 0.00041 20.7 0.1 2.0 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PIRT PF15099.6 ORF103129 - 0.011 15.3 0.4 0.13 11.9 0.4 2.8 1 1 0 1 1 1 0 Phosphoinositide-interacting protein family DHHC PF01529.20 ORF103129 - 0.27 11.4 2.7 0.35 11.0 0.6 2.2 1 1 1 2 2 2 0 DHHC palmitoyltransferase RRM_2 PF04059.12 ORF102839 - 1.2e-20 73.4 0.0 2.1e-20 72.7 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif 2 La_HTH_kDCL PF18177.1 ORF102839 - 0.062 13.6 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 La HTH in kinetoplastid DICER domain Chi-conotoxin PF16981.5 ORF102108 - 0.28 11.4 2.3 0.4 10.9 0.2 2.4 2 1 0 2 2 2 0 chi-Conotoxin or t superfamily U-box PF04564.15 ORF101532 - 6.5e-06 26.2 0.3 2.1e-05 24.6 0.0 1.9 2 0 0 2 2 2 1 U-box domain zf-CCCH PF00642.24 ORF101532 - 3.7e-05 23.5 0.9 3.7e-05 23.5 0.9 2.1 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) FapA PF03961.13 ORF101532 - 7.7e-05 21.5 6.1 0.00011 21.0 6.1 1.3 1 0 0 1 1 1 1 Flagellar Assembly Protein A zf_CCCH_4 PF18345.1 ORF101532 - 0.00022 21.2 0.4 0.00048 20.1 0.4 1.6 1 0 0 1 1 1 1 Zinc finger domain Cast PF10174.9 ORF101532 - 0.0039 15.5 11.4 0.0057 15.0 11.4 1.2 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone DUF3490 PF11995.8 ORF101532 - 0.0078 16.0 4.9 0.018 14.9 4.9 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF3490) zf-CCCH_4 PF18044.1 ORF101532 - 0.012 15.4 1.4 0.032 14.0 1.4 1.8 1 0 0 1 1 1 0 CCCH-type zinc finger OmpH PF03938.14 ORF101532 - 0.013 15.8 3.9 0.022 15.1 3.9 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Leu_zip PF15294.6 ORF101532 - 0.018 14.6 11.4 0.031 13.8 11.4 1.3 1 0 0 1 1 1 0 Leucine zipper tRNA_anti-codon PF01336.25 ORF101532 - 0.11 12.4 0.2 0.41 10.7 0.0 1.9 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain bZIP_1 PF00170.21 ORF101532 - 0.13 12.3 16.2 1.1 9.4 8.2 2.6 2 0 0 2 2 2 0 bZIP transcription factor DASH_Dam1 PF08653.10 ORF101532 - 0.15 11.9 1.1 0.5 10.2 0.1 2.3 2 1 0 2 2 2 0 DASH complex subunit Dam1 CENP-Q PF13094.6 ORF101532 - 0.16 12.2 8.0 0.26 11.5 8.0 1.3 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit IFP_35_N PF07334.13 ORF101532 - 0.17 12.0 6.3 0.38 10.9 1.7 2.5 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus DUF1664 PF07889.12 ORF101532 - 0.22 11.6 7.2 9.6 6.3 7.2 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) ACR_tran PF00873.19 ORF101532 - 0.42 8.2 0.8 0.53 7.9 0.8 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family FlaC_arch PF05377.11 ORF101532 - 0.5 10.8 12.4 6.4 7.3 0.3 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) GTP-bdg_M PF16360.5 ORF101532 - 0.53 10.9 3.3 4.6 7.9 2.7 2.4 1 1 0 1 1 1 0 GTP-binding GTPase Middle Region HMMR_C PF15908.5 ORF101532 - 0.6 10.4 11.8 0.45 10.8 6.2 2.3 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor C-terminal PRKG1_interact PF15898.5 ORF101532 - 0.61 11.0 13.9 0.29 12.0 9.9 2.5 1 1 2 3 3 3 0 cGMP-dependent protein kinase interacting domain Syntaxin_2 PF14523.6 ORF101532 - 1.3 9.5 13.0 2.7 8.4 13.0 1.5 1 0 0 1 1 1 0 Syntaxin-like protein LMBR1 PF04791.16 ORF101532 - 1.4 7.8 4.0 1.7 7.5 4.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Cnn_1N PF07989.11 ORF101532 - 1.4 9.1 12.1 2 8.6 5.3 2.5 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 DUF641 PF04859.12 ORF101532 - 1.7 9.0 10.2 1.5 9.2 8.5 1.8 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF1640 PF07798.11 ORF101532 - 4 7.5 12.1 8.5 6.4 12.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) DivIC PF04977.15 ORF101532 - 4.1 7.2 7.9 4.9 7.0 4.1 2.4 1 1 0 2 2 2 0 Septum formation initiator LPP PF04728.13 ORF101532 - 4.6 7.7 8.2 16 6.0 0.1 3.0 1 1 1 2 2 2 0 Lipoprotein leucine-zipper AKNA PF12443.8 ORF101532 - 6.1 7.6 10.2 14 6.4 6.5 2.5 1 1 1 2 2 2 0 AT-hook-containing transcription factor YabA PF06156.13 ORF101532 - 6.7 7.4 9.8 39 4.9 5.1 2.9 2 1 1 3 3 3 0 Initiation control protein YabA TMPIT PF07851.13 ORF101532 - 7.5 5.7 10.0 11 5.2 10.0 1.2 1 0 0 1 1 1 0 TMPIT-like protein Fzo_mitofusin PF04799.13 ORF101532 - 8.1 6.0 9.1 33 4.0 8.8 1.9 1 1 1 2 2 2 0 fzo-like conserved region YidD PF01809.18 NODE_23409_length_881_cov_6.106383_g18166_i0forward_frame_1 - 0.55 10.2 6.2 1.2 9.0 0.1 2.7 2 0 0 2 2 2 0 Putative membrane protein insertion efficiency factor DUF5634_N PF18672.1 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_1 - 0.14 11.9 0.7 0.25 11.1 0.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5634) Helicase_C PF00271.31 NODE_23330_length_883_cov_109.149764_g18101_i0forward_frame_3 - 4.2e-28 97.9 0.3 4.2e-28 97.9 0.3 2.5 2 1 1 3 3 3 1 Helicase conserved C-terminal domain DUF2452 PF10504.9 NODE_23330_length_883_cov_109.149764_g18101_i0forward_frame_3 - 0.021 14.3 0.8 0.021 14.3 0.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2452) GST_N_3 PF13417.6 NODE_23328_length_883_cov_127.345519_g18099_i0reverse_frame_3 - 1.5e-15 57.3 0.0 5.1e-14 52.4 0.0 2.3 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 NODE_23328_length_883_cov_127.345519_g18099_i0reverse_frame_3 - 1.9e-13 50.5 0.0 3.7e-13 49.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 NODE_23328_length_883_cov_127.345519_g18099_i0reverse_frame_3 - 2.7e-10 40.4 0.1 0.00034 20.9 0.0 2.3 1 1 1 2 2 2 2 Glutathione S-transferase, N-terminal domain GST_C_5 PF16865.5 NODE_23328_length_883_cov_127.345519_g18099_i0reverse_frame_3 - 4.5e-06 27.2 0.0 8.7e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 NODE_23328_length_883_cov_127.345519_g18099_i0reverse_frame_3 - 2.4e-05 24.2 0.6 4.4e-05 23.4 0.6 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 NODE_23328_length_883_cov_127.345519_g18099_i0reverse_frame_3 - 0.00017 21.7 0.1 0.00044 20.4 0.1 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 NODE_23328_length_883_cov_127.345519_g18099_i0reverse_frame_3 - 0.00024 21.3 0.0 0.00057 20.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 NODE_23328_length_883_cov_127.345519_g18099_i0reverse_frame_3 - 0.004 17.3 0.0 0.01 16.0 0.0 1.7 2 0 0 2 2 2 1 Glutaredoxin GST_N_4 PF17172.4 NODE_23328_length_883_cov_127.345519_g18099_i0reverse_frame_3 - 0.041 14.6 0.0 0.29 11.9 0.0 2.1 2 0 0 2 2 2 0 Glutathione S-transferase N-terminal domain DUF3123 PF11321.8 NODE_23292_length_884_cov_154.016490_g18069_i0forward_frame_3 - 0.27 11.9 6.7 2.5 8.8 0.6 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF3123) YebO PF13974.6 NODE_23258_length_885_cov_102.747059_g18043_i0reverse_frame_3 - 0.052 13.6 1.5 0.052 13.6 1.5 1.7 2 0 0 2 2 2 0 YebO-like protein RP-C_C PF11800.8 NODE_23258_length_885_cov_102.747059_g18043_i0forward_frame_3 - 0.074 13.1 0.2 0.1 12.7 0.2 1.2 1 0 0 1 1 1 0 Replication protein C C-terminal region MSL2-CXC PF16682.5 NODE_23249_length_885_cov_203.820000_g18036_i0forward_frame_2 - 2.7 8.2 8.7 0.33 11.1 3.1 2.1 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 DUF1176 PF06674.11 ORF99998 - 5.7e-89 298.8 0.0 6.4e-89 298.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1176) DUF443 PF04276.12 ORF99295 - 0.022 14.5 0.1 0.049 13.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF443) adh_short PF00106.25 ORF96866 - 4.6e-32 111.1 0.0 6.1e-32 110.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF96866 - 1e-19 71.0 0.0 1.4e-19 70.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF96866 - 1.8e-08 34.5 0.4 2.6e-08 34.0 0.0 1.4 2 0 0 2 2 1 1 KR domain UDPG_MGDP_dh_N PF03721.14 ORF96866 - 0.00071 19.2 0.2 0.0011 18.6 0.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 ORF96866 - 0.0036 17.2 0.0 0.0056 16.6 0.0 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 ORF96866 - 0.0054 15.9 0.1 0.0072 15.5 0.1 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Epimerase PF01370.21 ORF96866 - 0.007 15.9 0.0 0.0098 15.4 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family ThiF PF00899.21 ORF96866 - 0.014 14.7 0.3 4 6.7 0.1 2.2 1 1 1 2 2 2 0 ThiF family TrkA_N PF02254.18 ORF96866 - 0.016 15.5 0.1 0.025 14.8 0.1 1.3 1 0 0 1 1 1 0 TrkA-N domain ApbA PF02558.16 ORF96866 - 0.017 14.8 0.0 0.027 14.1 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox PF00070.27 ORF96866 - 0.019 15.5 0.2 0.089 13.4 0.2 2.0 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Methyltransf_25 PF13649.6 ORF96866 - 0.024 15.3 0.1 0.2 12.4 0.1 2.2 1 1 0 1 1 1 0 Methyltransferase domain Pyr_redox_2 PF07992.14 ORF96866 - 0.026 13.8 0.0 0.036 13.3 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Citrate_ly_lig PF08218.11 ORF96866 - 0.048 13.3 0.0 0.078 12.7 0.0 1.4 1 0 0 1 1 1 0 Citrate lyase ligase C-terminal domain NAD_binding_2 PF03446.15 ORF96866 - 0.074 13.2 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_3 PF13738.6 ORF96866 - 0.079 12.2 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase RmlD_sub_bind PF04321.17 ORF96866 - 0.092 11.8 0.0 0.14 11.2 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Abhydrolase_1 PF00561.20 ORF96234 - 6.2e-05 22.8 0.1 0.0001 22.0 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold N6_N4_Mtase PF01555.18 ORF92727 - 6.8e-54 183.0 0.0 8.5e-54 182.7 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Cons_hypoth95 PF03602.15 ORF92727 - 3.2e-06 26.9 0.0 0.002 17.8 0.0 2.5 2 1 0 2 2 2 2 Conserved hypothetical protein 95 UPF0020 PF01170.18 ORF92727 - 0.0078 15.9 0.0 1.4 8.6 0.0 2.6 2 1 0 2 2 2 2 Putative RNA methylase family UPF0020 MethyltransfD12 PF02086.15 ORF92727 - 0.019 14.6 0.0 0.27 10.9 0.0 2.3 3 0 0 3 3 3 0 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_11 PF08241.12 ORF92727 - 0.034 14.8 0.1 0.8 10.4 0.0 2.8 2 2 0 2 2 2 0 Methyltransferase domain Methyltransf_15 PF09445.10 ORF92727 - 0.085 12.4 0.0 10 5.6 0.0 2.2 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase HSP33 PF01430.19 ORF87340 - 7.9e-86 287.8 0.0 9e-86 287.6 0.0 1.0 1 0 0 1 1 1 1 Hsp33 protein GcpE PF04551.14 ORF86652 - 0.057 12.5 0.1 0.082 12.0 0.1 1.2 1 0 0 1 1 1 0 GcpE protein Homeodomain PF00046.29 ORF85633 - 1.2e-07 31.5 4.8 2.9e-07 30.2 4.8 1.6 1 0 0 1 1 1 1 Homeodomain Rad50_zn_hook PF04423.14 ORF85633 - 0.089 12.6 0.3 0.089 12.6 0.3 2.4 2 0 0 2 2 2 0 Rad50 zinc hook motif ABC_tran PF00005.27 ORF78081 - 3.7e-14 53.4 0.0 7.4e-14 52.4 0.0 1.5 1 0 0 1 1 1 1 ABC transporter CBS PF00571.28 ORF78081 - 3e-08 34.0 0.1 8.5e-06 26.1 0.0 2.9 3 0 0 3 3 3 1 CBS domain AAA_21 PF13304.6 ORF78081 - 0.012 15.5 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 ORF78081 - 0.05 13.5 0.1 0.084 12.8 0.1 1.4 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter ABC_ATPase PF09818.9 ORF78081 - 0.056 12.2 0.0 0.08 11.7 0.0 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class SbcCD_C PF13558.6 ORF78081 - 0.099 12.9 0.0 0.25 11.6 0.0 1.7 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks64.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks64.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks64.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks64.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- XhlA PF10779.9 ORF7791 - 0.31 11.3 1.7 2.6 8.3 1.3 2.5 2 0 0 2 2 2 0 Haemolysin XhlA DUF2576 PF10845.8 ORF7791 - 0.34 10.5 4.3 0.18 11.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) ZapB PF06005.12 ORF7791 - 0.63 10.5 7.2 0.83 10.1 1.8 2.9 4 0 0 4 4 4 0 Cell division protein ZapB Fzo_mitofusin PF04799.13 ORF7791 - 1.2 8.7 6.0 1.3 8.6 4.1 1.9 2 0 0 2 2 2 0 fzo-like conserved region Abhydrolase_1 PF00561.20 ORF76886 - 6.2e-05 22.8 0.1 0.0001 22.0 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold XhlA PF10779.9 ORF68483 - 0.31 11.3 1.7 2.6 8.3 1.3 2.5 2 0 0 2 2 2 0 Haemolysin XhlA DUF2576 PF10845.8 ORF68483 - 0.34 10.5 4.3 0.18 11.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) ZapB PF06005.12 ORF68483 - 0.63 10.5 7.2 0.83 10.1 1.8 2.9 4 0 0 4 4 4 0 Cell division protein ZapB Fzo_mitofusin PF04799.13 ORF68483 - 1.2 8.7 6.0 1.3 8.6 4.1 1.9 2 0 0 2 2 2 0 fzo-like conserved region U62_UL91 PF17442.2 ORF68439 - 0.12 12.4 1.3 0.31 11.1 0.2 2.4 2 0 0 2 2 2 0 Functional domain of U62 and UL91 proteins VDE PF07137.11 ORF67816 - 1e-20 74.3 0.0 1.8e-20 73.5 0.0 1.4 1 1 0 1 1 1 1 VDE lipocalin domain adh_short_C2 PF13561.6 ORF66857 - 6.6e-58 196.0 0.0 7.9e-58 195.8 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF66857 - 3.2e-44 150.8 0.0 3.8e-44 150.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF66857 - 2.1e-07 31.1 0.0 2.8e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 KR domain RecX PF02631.16 ORF66857 - 0.067 13.7 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 RecX family Hpt PF01627.23 ORF6511 - 0.013 15.7 1.3 8.1 6.8 0.0 3.1 3 0 0 3 3 3 0 Hpt domain Hemerythrin PF01814.23 ORF6511 - 0.39 11.3 3.3 4.6 7.9 0.4 2.9 1 1 0 2 2 2 0 Hemerythrin HHE cation binding domain Dala_Dala_lig_N PF01820.21 ORF64588 - 0.047 14.2 0.2 0.19 12.2 0.0 2.1 1 1 1 2 2 2 0 D-ala D-ala ligase N-terminus Abhydrolase_1 PF00561.20 ORF58666 - 5.5e-05 22.9 0.1 0.0001 22.0 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold WD40 PF00400.32 ORF58138 - 2.5e-30 104.1 9.0 1.3e-07 32.2 0.0 7.2 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF58138 - 1.8e-10 41.0 0.1 0.043 14.1 0.0 4.7 1 1 4 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 ORF58138 - 1e-05 24.5 2.0 0.019 13.7 0.0 4.0 1 1 3 4 4 4 2 Nucleoporin Nup120/160 DUF5046 PF16465.5 ORF58138 - 0.00021 20.8 0.0 0.00056 19.4 0.0 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF5046) WD40_like PF17005.5 ORF58138 - 0.0035 16.7 0.0 0.023 14.0 0.0 2.1 1 1 1 2 2 2 1 WD40-like domain PHTB1_N PF14727.6 ORF58138 - 0.051 12.9 0.0 1.3 8.3 0.0 2.2 2 0 0 2 2 2 0 PTHB1 N-terminus Peptidase_U32 PF01136.19 ORF57380 - 7.7e-13 48.1 0.0 1.1e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family U32 HCO3_cotransp PF00955.21 ORF56691 - 4.5e-64 217.1 0.1 5.3e-64 216.9 0.1 1.1 1 0 0 1 1 1 1 HCO3- transporter family XhlA PF10779.9 ORF55659 - 0.31 11.3 1.7 2.6 8.3 1.3 2.5 2 0 0 2 2 2 0 Haemolysin XhlA DUF2576 PF10845.8 ORF55659 - 0.34 10.5 4.3 0.18 11.4 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2576) ZapB PF06005.12 ORF55659 - 0.63 10.5 7.2 0.83 10.1 1.8 2.9 4 0 0 4 4 4 0 Cell division protein ZapB Fzo_mitofusin PF04799.13 ORF55659 - 1.2 8.7 6.0 1.3 8.6 4.1 1.9 2 0 0 2 2 2 0 fzo-like conserved region IER PF05760.12 ORF46053 - 3.1 8.0 7.0 4.6 7.4 7.0 1.2 1 0 0 1 1 1 0 Immediate early response protein (IER) DLH PF01738.18 ORF4596 - 2.6e-25 89.2 0.0 3.4e-25 88.9 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 ORF4596 - 0.0025 17.8 0.1 0.15 12.0 0.0 2.1 2 0 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 ORF4596 - 0.0055 16.2 0.3 0.0086 15.6 0.3 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF1100 PF06500.11 ORF4596 - 0.019 13.8 0.0 0.03 13.1 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) ILVD_EDD PF00920.21 ORF44914 - 3.3e-93 313.1 0.2 3.7e-93 312.9 0.2 1.0 1 0 0 1 1 1 1 Dehydratase family Pkinase PF00069.25 ORF44606 - 5.1e-64 216.2 0.6 5.9e-64 216.0 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF44606 - 1.4e-36 126.1 0.0 1.7e-36 125.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF44606 - 4.4e-05 22.9 0.0 7e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF44606 - 0.00011 21.2 0.0 0.0002 20.3 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF44606 - 0.00022 20.9 0.9 0.00048 19.8 0.9 1.6 1 1 0 1 1 1 1 RIO1 family YrbL-PhoP_reg PF10707.9 ORF44606 - 0.00079 19.0 0.0 0.0013 18.2 0.0 1.4 1 0 0 1 1 1 1 PhoP regulatory network protein YrbL Kinase-like PF14531.6 ORF44606 - 0.0012 18.2 0.0 0.0023 17.3 0.0 1.4 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF44606 - 0.0015 18.5 0.0 0.0043 17.0 0.0 1.5 1 1 1 2 2 2 1 Phosphotransferase enzyme family CRM1_repeat_2 PF18784.1 ORF44606 - 0.003 17.1 0.1 0.0069 16.0 0.1 1.6 1 0 0 1 1 1 1 CRM1 / Exportin repeat 2 Haspin_kinase PF12330.8 ORF44606 - 0.0035 16.3 0.7 0.0076 15.2 0.7 1.5 1 1 0 1 1 1 1 Haspin like kinase domain Abhydrolase_1 PF00561.20 ORF39131 - 8.9e-05 22.3 0.2 0.00015 21.5 0.1 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold ECH_1 PF00378.20 ORF37645 - 3.8e-24 85.4 0.1 5.1e-24 84.9 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF37645 - 6.2e-08 32.5 0.1 7.7e-08 32.2 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase RcsF PF16358.5 ORF37645 - 0.076 13.1 0.0 0.41 10.7 0.0 2.0 2 0 0 2 2 2 0 RcsF lipoprotein Agenet PF05641.12 ORF29870 - 0.11 13.0 0.0 0.28 11.7 0.0 1.7 1 0 0 1 1 1 0 Agenet domain AAA_23 PF13476.6 ORF29560 - 0.19 12.2 4.0 0.33 11.4 4.0 1.5 1 0 0 1 1 1 0 AAA domain DUF1664 PF07889.12 ORF29560 - 0.35 10.9 3.6 0.74 9.9 3.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) FAA_hydro_N_2 PF18288.1 ORF29560 - 0.43 11.0 8.9 0.21 12.1 1.7 2.7 2 1 0 2 2 2 0 Fumarylacetoacetase N-terminal domain 2 XhlA PF10779.9 ORF29560 - 3.2 8.0 5.4 1.8 8.8 2.1 2.3 2 1 1 3 3 3 0 Haemolysin XhlA Abhydrolase_1 PF00561.20 ORF23076 - 6.2e-05 22.8 0.1 0.0001 22.0 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Mo-nitro_C PF06967.11 ORF23076 - 0.089 12.8 0.2 0.24 11.4 0.2 1.6 1 0 0 1 1 1 0 Mo-dependent nitrogenase C-terminus LRR_4 PF12799.7 ORF210 - 0.0048 17.3 0.3 6.2 7.4 0.0 2.7 2 0 0 2 2 2 2 Leucine Rich repeats (2 copies) Peptidase_C3 PF00548.20 ORF210 - 0.031 14.2 0.3 0.074 13.0 0.3 1.6 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) DUF4252 PF14060.6 ORF210 - 0.078 12.9 2.0 0.15 11.9 2.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4252) DivIVA PF05103.13 ORF16518 - 0.0054 16.8 0.7 0.0054 16.8 0.7 2.8 3 0 0 3 3 3 2 DivIVA protein TPR_2 PF07719.17 ORF152043 - 7.5e-17 60.0 8.4 5.7e-05 22.9 0.0 4.7 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_1 PF00515.28 ORF152043 - 6.4e-15 54.3 6.9 1.2e-05 24.9 0.0 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 ORF152043 - 1.8e-10 40.8 7.2 7e-05 22.9 0.3 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF152043 - 6.4e-10 38.6 5.3 0.00012 21.7 1.2 4.1 3 1 1 4 4 4 2 TPR repeat TPR_14 PF13428.6 ORF152043 - 9.5e-10 38.5 6.1 0.003 18.2 0.0 4.7 2 1 3 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF152043 - 4.7e-09 35.8 5.2 0.035 14.3 0.0 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 ORF152043 - 8.5e-08 32.7 11.1 0.0019 18.8 1.4 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF152043 - 1.9e-06 28.3 5.6 3.4e-05 24.3 0.1 3.7 3 2 0 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF152043 - 1.6e-05 25.0 5.8 1.5 9.4 0.0 5.1 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF152043 - 5.2e-05 23.5 10.2 0.31 11.4 0.3 3.6 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 ORF152043 - 0.0015 18.4 4.1 11 6.3 0.0 4.3 2 1 1 3 3 3 2 Tetratricopeptide repeat NARP1 PF12569.8 ORF152043 - 0.0056 15.6 0.8 1.8 7.4 0.3 2.1 2 0 0 2 2 2 2 NMDA receptor-regulated protein 1 RPN7 PF10602.9 ORF152043 - 0.0078 15.9 0.9 0.062 13.0 0.1 2.5 2 1 1 3 3 3 1 26S proteasome subunit RPN7 TPR_10 PF13374.6 ORF152043 - 0.039 13.8 7.8 3.7 7.5 0.0 3.9 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF152043 - 0.11 13.2 13.1 17 6.3 0.0 5.5 5 0 0 5 5 5 0 Tetratricopeptide repeat Arg_decarbox_C PF17944.1 ORF152043 - 2.2 8.9 5.4 1.6 9.3 0.6 2.9 3 0 0 3 3 3 0 Arginine decarboxylase C-terminal helical extension zf-RING_2 PF13639.6 ORF149694 - 3.9e-08 33.5 14.1 1.2e-06 28.7 10.4 2.5 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF149694 - 1.7e-07 31.4 7.3 1.7e-07 31.4 7.3 2.1 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF149694 - 8.9e-06 25.4 6.2 0.0095 15.7 3.2 2.9 2 0 0 2 2 2 2 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF149694 - 0.0012 18.7 17.3 0.0089 15.9 12.3 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF149694 - 0.0015 18.5 3.5 0.0015 18.5 3.5 1.7 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF149694 - 0.016 15.0 15.3 0.027 14.3 9.5 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF149694 - 0.029 14.0 6.3 0.029 14.0 6.3 2.1 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF149694 - 0.031 14.1 7.0 0.031 14.1 7.0 2.1 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Syntaxin_2 PF14523.6 ORF149694 - 0.11 12.9 3.5 8 6.9 0.2 2.4 2 0 0 2 2 2 0 Syntaxin-like protein Sulfotransfer_4 PF17784.1 ORF149694 - 0.11 12.3 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Sulfotransferase domain GAT PF03127.14 ORF149694 - 0.15 12.4 2.4 11 6.4 0.5 2.7 2 0 0 2 2 2 0 GAT domain FANCL_C PF11793.8 ORF149694 - 0.23 11.6 15.4 0.24 11.6 7.5 3.0 2 2 1 3 3 3 0 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 ORF149694 - 0.81 9.6 17.1 0.13 12.1 8.9 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF149694 - 4.3 7.5 11.2 3.3 7.8 6.4 2.5 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_5 PF14634.6 ORF149694 - 6.4 6.8 14.4 2.2 8.3 7.1 2.4 2 0 0 2 2 2 0 zinc-RING finger domain zf-C3H2C3 PF17122.5 ORF149694 - 9.7 6.3 17.5 3.5 7.7 6.5 2.6 2 1 0 2 2 2 0 Zinc-finger DUF1295 PF06966.12 ORF144454 - 8.6e-46 156.4 1.6 1e-45 156.1 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF144454 - 6e-08 32.8 1.1 6e-08 32.8 1.1 2.0 2 0 0 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF144454 - 5.4e-06 26.7 1.0 5.4e-06 26.7 1.0 2.3 3 1 0 3 3 3 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF144454 - 1.2e-05 25.6 0.7 1.2e-05 25.6 0.7 2.6 3 1 0 3 3 3 1 Phospholipid methyltransferase ALG11_N PF15924.5 ORF140788 - 9.7e-52 176.1 5.9 1.1e-49 169.3 5.9 2.1 1 1 0 1 1 1 1 ALG11 mannosyltransferase N-terminus Glyco_transf_4 PF13439.6 ORF140788 - 0.0058 16.6 0.1 0.008 16.2 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 DCB PF16213.5 ORF140788 - 0.028 14.1 0.2 0.046 13.4 0.2 1.3 1 0 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 PAZ_siRNAbind PF12212.8 ORF140788 - 0.055 13.3 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 PAZ domain Peptidase_C65 PF10275.9 ORF137738 - 2e-48 165.0 6.9 2e-48 165.0 6.9 1.5 1 1 1 2 2 2 1 Peptidase C65 Otubain Peptidase_C101 PF16218.5 ORF137738 - 0.0061 15.8 1.6 0.0061 15.8 1.6 2.3 1 1 2 3 3 3 1 Peptidase family C101 DAHP_synth_2 PF01474.16 ORF137738 - 0.019 13.5 1.4 0.029 12.9 1.3 1.3 1 1 0 1 1 1 0 Class-II DAHP synthetase family FKBP_N_2 PF18023.1 ORF137738 - 0.038 14.1 1.8 9.6 6.4 0.0 3.6 3 1 1 4 4 4 0 BDBT FKBP like N-terminal OTU PF02338.19 ORF137738 - 0.039 14.5 2.6 0.078 13.5 0.2 2.6 2 1 0 2 2 2 0 OTU-like cysteine protease ALMT PF11744.8 ORF133138 - 0.55 9.0 7.3 0.72 8.6 7.3 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Toxin_12 PF07740.12 ORF131178 - 0.025 15.2 0.5 0.025 15.2 0.5 2.2 2 0 0 2 2 2 0 Ion channel inhibitory toxin ALG11_N PF15924.5 ORF130730 - 9.7e-52 176.1 5.9 1.1e-49 169.3 5.9 2.1 1 1 0 1 1 1 1 ALG11 mannosyltransferase N-terminus Glyco_transf_4 PF13439.6 ORF130730 - 0.0058 16.6 0.1 0.008 16.2 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 DCB PF16213.5 ORF130730 - 0.028 14.1 0.2 0.046 13.4 0.2 1.3 1 0 0 1 1 1 0 Dimerisation and cyclophilin-binding domain of Mon2 PAZ_siRNAbind PF12212.8 ORF130730 - 0.055 13.3 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 PAZ domain DDE_Tnp_IS66_C PF13817.6 ORF130549 - 2.9e-09 37.0 2.2 7.5e-09 35.7 2.2 1.7 1 0 0 1 1 1 1 IS66 C-terminal element HUN PF08729.10 ORF130004 - 1.6 8.8 11.7 0.22 11.5 5.7 2.5 2 0 0 2 2 2 0 HPC2 and ubinuclein domain Sde2_N_Ubi PF13019.6 ORF128527 - 0.12 12.2 0.6 0.27 11.0 0.1 1.9 2 0 0 2 2 2 0 Silencing defective 2 N-terminal ubiquitin domain Myb_DNA-binding PF00249.31 ORF125670 - 2.2e-09 37.3 3.4 0.00085 19.5 0.4 2.6 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF125670 - 2.4e-08 34.1 8.7 0.00083 19.6 0.9 3.0 3 0 0 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF125670 - 0.00072 19.4 0.6 0.00072 19.4 0.6 2.5 2 2 0 2 2 2 1 Myb DNA-binding like zinc-ribbon_6 PF10005.9 ORF125670 - 0.099 13.3 3.7 0.25 12.0 1.9 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DUF1768 PF08719.11 ORF125670 - 0.35 11.1 3.6 5.6 7.2 3.3 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF1768) Homeodomain PF00046.29 ORF12432 - 1.2e-07 31.5 4.8 2.9e-07 30.2 4.8 1.6 1 0 0 1 1 1 1 Homeodomain Rad50_zn_hook PF04423.14 ORF12432 - 0.089 12.6 0.3 0.089 12.6 0.3 2.4 2 0 0 2 2 2 0 Rad50 zinc hook motif Nudix_hydro PF18290.1 ORF11739 - 3.5e-25 87.8 0.0 6.9e-25 86.9 0.0 1.5 1 0 0 1 1 1 1 Nudix hydrolase domain NUDIX PF00293.28 ORF11739 - 6e-23 81.3 0.0 9.9e-23 80.6 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain Homeodomain PF00046.29 ORF114200 - 0.0014 18.4 2.2 0.0037 17.1 2.2 1.7 1 0 0 1 1 1 1 Homeodomain adh_short_C2 PF13561.6 ORF114042 - 6.6e-58 196.0 0.0 7.9e-58 195.8 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF114042 - 3.2e-44 150.8 0.0 3.8e-44 150.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF114042 - 2.1e-07 31.1 0.0 2.8e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 KR domain RecX PF02631.16 ORF114042 - 0.067 13.7 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 RecX family Actin PF00022.19 ORF11365 - 3.8e-116 388.0 0.0 1.4e-115 386.1 0.0 1.7 1 1 0 1 1 1 1 Actin RTC PF01137.21 ORF11276 - 4.3e-43 147.1 0.0 4.8e-43 146.9 0.0 1.1 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase S1-P1_nuclease PF02265.16 ORF110550 - 3.1e-22 79.6 0.0 3.6e-22 79.4 0.0 1.1 1 0 0 1 1 1 1 S1/P1 Nuclease Asp_Arg_Hydrox PF05118.15 ORF100191 - 4.6e-22 78.5 0.9 8.8e-22 77.6 0.9 1.5 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase Use1 PF09753.9 NODE_23490_length_878_cov_367.926453_g18234_i0reverse_frame_1 - 0.54 9.9 1.0 0.83 9.3 1.0 1.2 1 0 0 1 1 1 0 Membrane fusion protein Use1 EMP70 PF02990.16 NODE_23490_length_878_cov_367.926453_g18234_i0reverse_frame_1 - 4 6.0 6.4 6.6 5.3 6.4 1.4 1 0 0 1 1 1 0 Endomembrane protein 70 DUF2070 PF09843.9 NODE_23490_length_878_cov_367.926453_g18234_i0reverse_frame_1 - 9.7 4.3 14.1 14 3.9 14.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Pox_Ag35 PF03286.14 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 0.17 11.6 20.5 0.42 10.4 20.5 1.7 1 0 0 1 1 1 0 Pox virus Ag35 surface protein CobT PF06213.12 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 0.84 9.0 19.2 1.6 8.1 19.2 1.5 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT NOA36 PF06524.12 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 0.88 8.8 18.7 1.6 8.0 18.7 1.5 1 0 0 1 1 1 0 NOA36 protein DUF4820 PF16091.5 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 1.9 7.8 9.5 3.7 6.8 9.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Presenilin PF01080.17 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 3.1 6.5 12.1 4.3 6.0 12.1 1.2 1 0 0 1 1 1 0 Presenilin RNA_pol_Rpc4 PF05132.14 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 3.1 8.2 13.1 6 7.3 13.1 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 RP-C_C PF11800.8 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 4.4 7.3 8.3 7.5 6.6 8.3 1.3 1 0 0 1 1 1 0 Replication protein C C-terminal region SspB PF04386.13 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 5.4 6.9 11.0 11 5.9 11.0 1.5 1 0 0 1 1 1 0 Stringent starvation protein B PPL5 PF18168.1 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 5.5 6.2 14.1 10 5.3 14.1 1.5 1 0 0 1 1 1 0 Prim-pol family 5 DUF2076 PF09849.9 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_1 - 6.8 6.6 13.3 11 6.0 13.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF4094 PF13334.6 NODE_23410_length_881_cov_4.341608_g18167_i0forward_frame_2 - 8.9 6.8 10.2 0.69 10.4 1.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4094) Rapsyn_N PF10579.9 NODE_23390_length_881_cov_297.957447_g18150_i0reverse_frame_3 - 0.1 12.7 0.1 0.39 10.8 0.0 2.0 3 0 0 3 3 3 0 Rapsyn N-terminal myristoylation and linker region NAD_binding_10 PF13460.6 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_3 - 4.4e-37 127.8 3.6 5.9e-36 124.1 3.6 2.0 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_3 - 8.2e-12 45.2 0.0 1.2e-11 44.6 0.0 1.3 1 1 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_3 - 2.2e-08 33.8 0.1 4.1e-08 33.0 0.1 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_3 - 6.7e-07 28.6 0.1 9.2e-07 28.1 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family KR PF08659.10 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_3 - 0.00024 21.0 1.1 0.00053 19.9 1.1 1.5 1 1 0 1 1 1 1 KR domain DapB_N PF01113.20 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_3 - 0.0023 18.1 0.5 0.0051 16.9 0.5 1.7 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Polysacc_synt_2 PF02719.15 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_3 - 0.0073 15.5 1.3 0.033 13.3 1.3 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein PAC2 PF09754.9 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_3 - 0.011 15.7 0.0 0.032 14.2 0.0 1.5 1 1 0 1 1 1 0 PAC2 family RmlD_sub_bind PF04321.17 NODE_23383_length_881_cov_571.093381_g11363_i1forward_frame_3 - 0.03 13.4 0.7 0.7 8.9 0.7 2.3 1 1 0 1 1 1 0 RmlD substrate binding domain SHIPPO-rpt PF07004.12 ORF9527 - 0.0025 18.7 25.8 0.053 14.5 1.0 5.7 5 1 0 5 5 5 3 Sperm-tail PG-rich repeat zf-H2C2_2 PF13465.6 ORF94077 - 4.8e-06 26.7 4.3 4.8e-06 26.7 4.3 3.5 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF94077 - 1.6e-05 25.1 2.1 1.6e-05 25.1 2.1 3.1 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF94077 - 0.00048 20.7 1.3 0.00048 20.7 1.3 3.0 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF94077 - 0.026 14.3 1.3 0.09 12.6 0.1 2.4 2 0 0 2 2 2 0 zinc-finger C2H2-type EF1G PF00647.19 ORF94077 - 0.15 12.1 1.6 0.28 11.3 0.3 2.2 2 1 0 2 2 2 0 Elongation factor 1 gamma, conserved domain zf-BED PF02892.15 ORF94077 - 0.23 11.5 7.7 0.06 13.4 3.2 2.4 1 1 1 2 2 2 0 BED zinc finger zf-met PF12874.7 ORF94077 - 0.57 10.7 7.9 0.23 11.9 0.9 2.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF94077 - 4.6 7.7 12.1 0.62 10.4 0.5 3.5 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding UDG PF03167.19 ORF92691 - 4e-21 75.6 0.0 6.4e-21 75.0 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Peripla_BP_5 PF13433.6 ORF92691 - 0.1 11.6 0.0 0.16 10.9 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein domain S1-P1_nuclease PF02265.16 ORF91938 - 8.3e-20 71.7 0.0 1e-19 71.4 0.0 1.1 1 0 0 1 1 1 1 S1/P1 Nuclease hnRNP_Q_AcD PF18360.1 ORF90889 - 8.5e-06 25.6 0.1 0.00083 19.3 0.3 2.4 2 0 0 2 2 2 1 Heterogeneous nuclear ribonucleoprotein Q acidic domain YusW PF14039.6 ORF90889 - 0.18 12.3 2.1 2.9 8.5 0.5 2.5 2 0 0 2 2 2 0 YusW-like protein Bap31_Bap29_C PF18035.1 ORF90889 - 0.3 11.1 3.7 0.14 12.2 0.7 2.0 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain V_ATPase_I PF01496.19 ORF90889 - 1.4 6.8 7.4 0.23 9.3 1.6 1.9 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Ank_2 PF12796.7 ORF90542 - 4.7e-31 107.2 0.0 3.2e-10 40.4 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF90542 - 6.3e-27 93.6 0.2 3.8e-09 36.9 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF90542 - 1.7e-22 78.8 1.7 0.00066 20.0 0.0 6.1 6 0 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 ORF90542 - 3e-20 70.1 0.1 0.0029 18.0 0.0 6.3 6 0 0 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 ORF90542 - 9.9e-19 67.2 5.0 8.7e-06 25.9 0.1 5.7 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Imm_superinfect PF14373.6 ORF90542 - 0.16 11.9 2.3 26 4.9 0.2 4.1 4 0 0 4 4 4 0 Superinfection immunity protein MORN PF02493.20 ORF86239 - 7.5e-44 145.1 66.0 1.1e-08 34.4 1.7 9.5 10 0 0 10 10 10 7 MORN repeat DUF3048_C PF17479.2 ORF86239 - 0.47 10.9 20.8 4.5 7.7 0.1 4.6 1 1 2 4 4 4 0 Protein of unknown function (DUF3048) C-terminal domain zf-RING_2 PF13639.6 ORF77512 - 4.4e-09 36.5 5.3 4.4e-09 36.5 5.3 2.1 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF77512 - 2.6e-05 23.8 3.7 9.6e-05 22.0 3.7 2.0 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF77512 - 7.1e-05 22.6 4.5 7.1e-05 22.6 4.5 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF77512 - 0.00013 22.2 2.3 0.00013 22.2 2.3 2.0 2 0 0 2 2 2 1 RING-H2 zinc finger domain PHD PF00628.29 ORF77512 - 0.0026 17.6 5.3 0.0026 17.6 5.3 1.6 2 0 0 2 2 2 1 PHD-finger Zn_ribbon_17 PF17120.5 ORF77512 - 0.0067 16.0 5.2 0.0067 16.0 5.2 2.1 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 ORF77512 - 0.011 15.8 0.7 0.011 15.8 0.7 2.2 2 1 0 2 2 2 0 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF77512 - 0.02 14.9 4.8 0.046 13.8 4.8 1.7 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 ORF77512 - 0.033 14.3 4.3 0.033 14.3 4.3 1.9 2 0 0 2 2 1 0 RING-variant domain zf-RING_5 PF14634.6 ORF77512 - 1.2 9.1 11.3 0.1 12.6 6.1 1.9 2 0 0 2 2 2 0 zinc-RING finger domain Herpes_LMP1 PF05297.11 ORF77512 - 1.6 7.8 4.2 2.3 7.3 4.2 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) zf-RING_4 PF14570.6 ORF77512 - 1.8 8.4 11.3 0.16 11.8 6.7 1.6 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_2 PF13923.6 ORF77512 - 1.9 8.4 10.1 0.19 11.6 4.7 2.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) CDH-cyt PF16010.5 ORF76860 - 0.014 15.1 1.0 1.6 8.4 0.1 2.3 2 0 0 2 2 2 0 Cytochrome domain of cellobiose dehydrogenase TMEM164 PF14808.6 ORF75683 - 8.5e-33 113.8 11.4 1e-32 113.5 11.4 1.0 1 0 0 1 1 1 1 TMEM164 family Virul_fac_BrkB PF03631.15 ORF72764 - 5.3e-57 193.4 24.7 6.2e-57 193.2 24.7 1.0 1 0 0 1 1 1 1 Virulence factor BrkB SpoIIIAC PF06686.11 ORF72764 - 2.4 8.4 7.4 1.2 9.3 0.2 2.9 3 0 0 3 3 3 0 Stage III sporulation protein AC/AD protein family Methyltransf_12 PF08242.12 ORF70420 - 0.00029 21.5 0.1 0.00099 19.8 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF70420 - 0.0017 19.0 0.0 0.0058 17.3 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF70420 - 0.0029 18.2 0.0 0.006 17.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 ORF70420 - 0.0088 15.5 0.0 0.025 14.0 0.0 1.7 1 1 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_23 PF13489.6 ORF70420 - 0.013 15.3 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain ubiquitin PF00240.23 ORF68368 - 7.7e-111 362.0 11.5 5.1e-28 96.6 0.1 4.0 4 0 0 4 4 4 4 Ubiquitin family Rad60-SLD PF11976.8 ORF68368 - 4.1e-52 173.9 13.4 9.9e-14 50.9 0.5 4.0 4 0 0 4 4 4 4 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF68368 - 1.7e-18 66.8 8.6 0.00086 19.7 0.0 5.9 4 4 0 4 4 4 4 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF68368 - 5.4e-16 58.7 2.1 0.024 14.7 0.0 5.3 4 4 0 4 4 4 4 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF68368 - 2.4e-14 53.7 0.6 0.051 14.1 0.1 4.2 1 1 3 4 4 4 4 DUF2407 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF68368 - 3.9e-14 52.8 2.8 0.0069 16.7 0.1 4.1 4 0 0 4 4 4 4 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF68368 - 2.2e-10 40.3 0.1 0.46 10.5 0.0 4.2 4 0 0 4 4 4 4 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF68368 - 4.4e-08 33.1 16.6 0.9 9.6 0.2 7.8 5 3 3 8 8 8 3 Ubiquitin-like domain UDP-g_GGTase PF06427.11 ORF68368 - 0.0067 16.5 0.5 28 4.9 0.0 3.2 3 0 0 3 3 3 0 UDP-glucose:Glycoprotein Glucosyltransferase DUF969 PF06149.12 ORF68368 - 0.008 15.6 0.3 2.9 7.2 0.0 3.5 3 1 1 4 4 4 1 Protein of unknown function (DUF969) Antimicrobial_7 PF08102.11 ORF68368 - 0.1 12.9 2.7 23 5.3 0.1 3.7 4 0 0 4 4 4 0 Scorpion antimicrobial peptide Plug_translocon PF10559.9 ORF68368 - 0.13 12.1 0.0 12 5.8 0.0 3.4 4 0 0 4 4 4 0 Plug domain of Sec61p Coagulin PF02035.15 ORF68368 - 0.32 10.9 1.7 9.2 6.1 0.0 2.9 3 0 0 3 3 3 0 Coagulin TPR_1 PF00515.28 ORF65717 - 1.7e-06 27.6 0.0 1e-05 25.2 0.0 2.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF65717 - 7.2e-06 26.0 0.0 0.19 12.2 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF65717 - 1.2e-05 25.0 0.0 6.2e-05 22.8 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 ORF65717 - 0.00043 20.9 0.1 0.0019 18.9 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF65717 - 0.0055 16.8 0.1 0.017 15.3 0.0 1.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF65717 - 0.017 15.6 0.0 0.56 10.7 0.2 2.4 1 1 1 2 2 2 0 Tetratricopeptide repeat SAM_3 PF18016.1 ORF65717 - 0.029 14.2 0.0 0.065 13.1 0.0 1.5 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) TPR_6 PF13174.6 ORF65717 - 0.034 14.8 0.0 0.2 12.4 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 ORF65717 - 0.048 13.9 0.0 0.22 11.8 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF65717 - 0.059 13.4 0.0 0.14 12.3 0.0 1.6 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat TPR_16 PF13432.6 ORF65717 - 0.14 12.8 0.2 0.66 10.7 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat adh_short PF00106.25 ORF65684 - 1.1e-27 96.8 0.0 1.4e-27 96.4 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF65684 - 3.7e-15 56.1 0.0 4.8e-15 55.8 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF65684 - 2.5e-05 24.3 0.0 3.8e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 KR domain 3HCDH_N PF02737.18 ORF65684 - 0.013 15.4 0.0 0.022 14.7 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Epimerase PF01370.21 ORF65684 - 0.1 12.0 0.0 0.21 11.0 0.0 1.5 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family MTS PF05175.14 ORF65684 - 0.12 11.9 0.0 0.35 10.4 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase small domain zf-RING_2 PF13639.6 ORF64590 - 4.6e-10 39.7 5.8 4.6e-10 39.7 5.8 2.5 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF64590 - 2.1e-07 31.1 6.2 2.1e-07 31.1 6.2 2.3 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF64590 - 3.6e-05 23.5 4.4 3.6e-05 23.5 4.4 2.5 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF64590 - 0.00041 20.0 6.8 0.00059 19.5 4.5 2.5 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_5 PF14634.6 ORF64590 - 0.016 15.2 4.9 0.016 15.2 4.9 2.6 2 0 0 2 2 2 0 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF64590 - 0.022 14.8 3.5 0.022 14.8 3.5 2.6 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger DUF4017 PF13209.6 ORF64590 - 0.37 10.8 11.4 0.22 11.5 2.5 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF4017) DUF4014 PF13198.6 ORF64590 - 2.4 8.6 6.0 0.3 11.5 0.8 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF4014) UPF0242 PF06785.11 ORF61431 - 0.33 11.0 28.8 0.23 11.5 25.8 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus KorB PF08535.10 ORF61431 - 0.49 10.5 5.7 1.1 9.3 0.7 2.3 2 0 0 2 2 2 0 KorB domain DUF465 PF04325.13 ORF61431 - 5.2 7.2 11.5 0.58 10.2 0.3 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF465) RELT PF12606.8 ORF5839 - 1.9 7.5 6.9 6.8 5.8 6.9 1.9 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Proho_convert PF12177.8 ORF54468 - 0.21 11.6 5.1 0.33 11.0 1.6 2.8 2 0 0 2 2 2 0 Prohormone convertase enzyme S1-P1_nuclease PF02265.16 ORF49984 - 6.5e-19 68.7 0.0 1.3e-18 67.8 0.0 1.5 1 1 0 1 1 1 1 S1/P1 Nuclease Ras PF00071.22 ORF49368 - 2.9e-51 173.3 0.3 2.9e-51 173.3 0.3 1.8 2 0 0 2 2 2 1 Ras family Roc PF08477.13 ORF49368 - 4.9e-30 104.2 0.1 1.3e-29 102.9 0.1 1.7 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF49368 - 8.6e-12 44.8 0.1 1.4e-11 44.2 0.1 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family CAP59_mtransfer PF11735.8 ORF49368 - 0.0028 17.4 0.3 0.0037 17.0 0.3 1.2 1 0 0 1 1 1 1 Cryptococcal mannosyltransferase 1 CN_hydrolase PF00795.22 ORF45051 - 5.1e-30 104.7 0.1 6.7e-30 104.3 0.1 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Phyto-Amp PF15438.6 ORF45051 - 0.064 13.1 0.0 14 5.5 0.0 2.2 2 0 0 2 2 2 0 Antigenic membrane protein of phytoplasma Phe_ZIP PF08916.11 ORF44485 - 0.0026 18.4 10.9 1.9 9.3 0.1 4.8 5 0 0 5 5 5 3 Phenylalanine zipper S1-P1_nuclease PF02265.16 ORF41816 - 6.5e-19 68.7 0.0 1.3e-18 67.8 0.0 1.5 1 1 0 1 1 1 1 S1/P1 Nuclease DUF3899 PF13038.6 ORF24552 - 0.18 12.3 0.0 0.18 12.3 0.0 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF3899) DUF3487 PF11990.8 ORF24552 - 3.2 7.7 6.0 1.3 8.9 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) DUF2207 PF09972.9 ORF24552 - 4 6.1 11.3 2.5 6.8 8.6 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) S1-P1_nuclease PF02265.16 ORF24537 - 8.3e-20 71.7 0.0 1e-19 71.4 0.0 1.1 1 0 0 1 1 1 1 S1/P1 Nuclease Metallophos PF00149.28 ORF18869 - 5.8e-40 138.0 0.1 7.6e-40 137.6 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 ORF18869 - 0.0044 17.4 0.1 0.013 15.9 0.1 1.8 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Metallophos_2 PF12850.7 ORF18869 - 0.066 13.4 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain RELT PF12606.8 ORF15464 - 1.9 7.5 6.9 6.8 5.8 6.9 1.9 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 F5_F8_type_C PF00754.25 ORF151197 - 3.8e-09 36.7 1.0 6.8e-09 35.9 1.0 1.4 1 0 0 1 1 1 1 F5/8 type C domain Mito_carr PF00153.27 ORF150803 - 2.5e-56 187.6 1.2 5.4e-19 67.9 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein PHAT PF09246.10 ORF144375 - 0.015 15.2 1.2 0.025 14.4 0.3 1.9 2 1 0 2 2 2 0 PHAT DUF3861 PF12977.7 ORF144375 - 0.056 13.6 0.1 0.13 12.4 0.1 1.6 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3861) Thioredoxin_16 PF18569.1 ORF144375 - 0.14 12.3 3.2 1.6 8.9 0.3 3.0 3 0 0 3 3 3 0 Thioredoxin-like domain adh_short_C2 PF13561.6 ORF14270 - 3e-53 180.8 0.1 1.7e-51 175.0 0.1 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF14270 - 1.9e-49 167.8 0.0 2.7e-49 167.3 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF14270 - 1.3e-06 28.4 0.0 2.7e-06 27.4 0.0 1.4 1 1 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF14270 - 0.15 11.1 0.0 0.22 10.6 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DUF1490 PF07371.12 ORF142473 - 0.13 12.3 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) DUF4179 PF13786.6 ORF142473 - 1.6 9.3 4.2 0.75 10.3 1.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4179) DUF1295 PF06966.12 ORF141962 - 1.7e-45 155.4 1.2 2e-45 155.2 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF141962 - 2.4e-06 27.6 2.3 2.4e-06 27.6 2.3 2.1 1 1 1 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF141962 - 6.9e-05 23.2 0.7 6.9e-05 23.2 0.7 2.6 3 1 0 3 3 3 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF141962 - 0.00012 22.5 0.5 0.00012 22.5 0.5 2.6 3 0 0 3 3 3 1 Phospholipid methyltransferase NnrU PF07298.11 ORF141962 - 0.77 9.2 3.4 0.66 9.4 0.3 2.2 2 1 1 3 3 3 0 NnrU protein TMEM164 PF14808.6 ORF139102 - 8.5e-33 113.8 11.4 1e-32 113.5 11.4 1.0 1 0 0 1 1 1 1 TMEM164 family Exo_endo_phos PF03372.23 ORF128281 - 6.1e-08 32.5 0.0 8.6e-07 28.7 0.0 2.1 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Rep_fac-A_C PF08646.10 ORF127748 - 4.4e-24 84.9 0.9 6.9e-24 84.3 0.9 1.4 1 0 0 1 1 1 1 Replication factor-A C terminal domain REPA_OB_2 PF16900.5 ORF127748 - 4.3e-07 29.8 0.0 9.1e-07 28.7 0.0 1.6 1 0 0 1 1 1 1 Replication protein A OB domain tRNA_anti-codon PF01336.25 ORF127748 - 0.015 15.3 0.1 2.4 8.2 0.0 2.9 2 1 0 3 3 3 0 OB-fold nucleic acid binding domain PHD PF00628.29 ORF127748 - 0.11 12.5 0.7 0.21 11.5 0.7 1.5 1 0 0 1 1 1 0 PHD-finger EF-hand_6 PF13405.6 ORF126926 - 2.2e-15 55.2 0.0 0.00013 21.6 0.0 4.1 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF126926 - 1.4e-12 47.9 1.0 3.9e-08 33.6 0.4 2.8 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF126926 - 3.1e-12 45.1 0.2 0.00059 19.2 0.1 4.0 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF126926 - 2e-07 30.8 3.1 0.19 11.6 0.1 3.9 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF126926 - 2.7e-06 26.6 0.0 0.077 12.5 0.0 2.9 2 0 0 2 2 2 2 EF hand UPF0160 PF03690.13 ORF126926 - 0.078 12.6 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0160) SPARC_Ca_bdg PF10591.9 ORF126926 - 0.12 12.7 0.4 1 9.7 0.1 2.3 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region PRD_Mga PF08270.11 ORF126682 - 0.12 12.1 0.1 1.3 8.6 0.0 2.2 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) PRD domain YfhO PF09586.10 ORF126682 - 0.36 9.0 0.1 0.64 8.2 0.0 1.4 2 0 0 2 2 2 0 Bacterial membrane protein YfhO PRD PF00874.20 ORF126682 - 0.37 11.1 2.9 0.61 10.4 0.1 2.7 3 0 0 3 3 3 0 PRD domain His_Phos_1 PF00300.22 ORF126341 - 1.7e-09 37.7 0.0 8.4e-06 25.6 0.0 2.5 2 1 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) PSI_8 PF00796.18 ORF118049 - 0.64 9.9 1.7 1 9.3 1.7 1.3 1 0 0 1 1 1 0 Photosystem I reaction centre subunit VIII C1_2 PF03107.16 ORF116296 - 7.3e-05 23.0 11.2 0.00021 21.6 8.2 2.3 2 0 0 2 2 2 1 C1 domain C1_1 PF00130.22 ORF116296 - 0.0026 17.6 8.2 0.057 13.3 4.9 2.4 2 0 0 2 2 2 2 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RING_4 PF14570.6 ORF116296 - 0.01 15.6 4.8 0.01 15.6 4.8 2.4 2 1 1 3 3 3 0 RING/Ubox like zinc-binding domain ZZ PF00569.17 ORF116296 - 0.16 11.8 5.0 0.36 10.7 5.0 1.6 1 0 0 1 1 1 0 Zinc finger, ZZ type PHD PF00628.29 ORF116296 - 1.6 8.7 10.9 7.4 6.6 10.9 2.1 1 1 0 1 1 1 0 PHD-finger IBR PF01485.21 ORF116296 - 4.6 7.5 10.5 17 5.7 10.5 2.0 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain Ammonium_transp PF00909.21 ORF116084 - 1.2e-38 132.8 6.9 1.5e-38 132.5 6.9 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family CBS PF00571.28 ORF115668 - 1.8e-18 66.7 0.0 7.5e-05 23.1 0.0 4.4 4 1 0 4 4 4 4 CBS domain NlpE_C PF17185.4 ORF115668 - 0.069 13.4 0.0 1.8 8.9 0.0 2.3 2 0 0 2 2 2 0 NlpE C-terminal OB domain hnRNP_Q_AcD PF18360.1 ORF115029 - 8.5e-06 25.6 0.1 0.00083 19.3 0.3 2.4 2 0 0 2 2 2 1 Heterogeneous nuclear ribonucleoprotein Q acidic domain YusW PF14039.6 ORF115029 - 0.18 12.3 2.1 2.9 8.5 0.5 2.5 2 0 0 2 2 2 0 YusW-like protein Bap31_Bap29_C PF18035.1 ORF115029 - 0.3 11.1 3.7 0.14 12.2 0.7 2.0 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain V_ATPase_I PF01496.19 ORF115029 - 1.4 6.8 7.4 0.23 9.3 1.6 1.9 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family PAN_4 PF14295.6 ORF10820 - 0.14 12.1 0.3 0.14 12.1 0.3 2.9 2 0 0 2 2 2 0 PAN domain Mod_r PF07200.13 ORF105078 - 8.4e-19 68.1 13.3 8.4e-19 68.1 13.3 1.9 2 0 0 2 2 2 1 Modifier of rudimentary (Mod(r)) protein UEV PF05743.13 ORF105078 - 3.3e-06 27.0 0.6 5.6e-06 26.2 0.2 1.6 2 0 0 2 2 2 1 UEV domain DUF1281 PF06924.11 ORF105078 - 0.00098 18.7 0.1 0.0017 17.9 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1281) DUF4876 PF16215.5 ORF105078 - 0.013 15.5 1.4 0.03 14.3 1.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4876) bZIP_Maf PF03131.17 ORF105078 - 2.3 8.8 7.9 0.76 10.3 1.0 2.7 2 0 0 2 2 2 0 bZIP Maf transcription factor Dicty_CTDC PF00526.18 ORF103110 - 0.17 11.8 0.0 0.17 11.8 0.0 2.5 3 0 0 3 3 3 0 Dictyostelium (slime mold) repeat UvrD-helicase PF00580.21 ORF103085 - 1.7e-19 70.5 0.0 2.4e-19 70.0 0.0 1.3 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 ORF103085 - 3.6e-15 56.2 0.0 4.4e-14 52.6 0.0 1.9 1 1 1 2 2 2 1 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 ORF103085 - 2.8e-11 43.0 0.6 3.6e-05 23.5 0.1 2.5 2 0 0 2 2 2 2 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 ORF103085 - 1.7e-10 41.4 0.0 4.6e-10 40.0 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_12 PF13087.6 ORF103085 - 4.5e-05 23.2 0.0 0.0005 19.7 0.0 2.1 1 1 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 ORF103085 - 0.00021 21.1 0.0 0.0016 18.2 0.0 2.2 1 1 0 1 1 1 1 Viral (Superfamily 1) RNA helicase DUF4132 PF13569.6 ORF101608 - 0.09 12.6 0.6 0.15 11.9 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4132) GGDEF PF00990.21 NODE_23669_length_874_cov_2.502980_g18384_i0reverse_frame_1 - 6.8e-38 129.9 0.0 1e-37 129.4 0.0 1.3 1 0 0 1 1 1 1 Diguanylate cyclase, GGDEF domain EAL PF00563.20 NODE_23669_length_874_cov_2.502980_g18384_i0reverse_frame_1 - 8.4e-29 100.8 0.2 1.2e-28 100.3 0.2 1.2 1 0 0 1 1 1 1 EAL domain GGDEF_2 PF17853.1 NODE_23669_length_874_cov_2.502980_g18384_i0reverse_frame_1 - 0.03 14.6 0.1 0.091 13.0 0.0 1.8 2 0 0 2 2 2 0 GGDEF-like domain Methyltransf_28 PF02636.17 NODE_23605_length_875_cov_295.852381_g18329_i0forward_frame_1 - 0.0097 15.6 0.2 0.015 14.9 0.1 1.5 1 1 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Peptidase_C3 PF00548.20 NODE_23605_length_875_cov_295.852381_g18329_i0forward_frame_1 - 0.03 14.2 1.4 0.036 14.0 0.2 1.7 2 0 0 2 2 2 0 3C cysteine protease (picornain 3C) Methyltransf_28 PF02636.17 NODE_23604_length_875_cov_304.326190_g18328_i0reverse_frame_1 - 0.0088 15.7 0.2 0.014 15.0 0.1 1.5 1 1 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Peptidase_C3 PF00548.20 NODE_23604_length_875_cov_304.326190_g18328_i0reverse_frame_1 - 0.064 13.2 0.3 0.064 13.2 0.3 1.7 2 0 0 2 2 2 0 3C cysteine protease (picornain 3C) RRS1 PF04939.12 NODE_23600_length_875_cov_509.383333_g18325_i0reverse_frame_1 - 2.6e-24 85.9 16.9 2.6e-24 85.9 16.9 1.7 2 0 0 2 2 2 1 Ribosome biogenesis regulatory protein (RRS1) RRM_1 PF00076.22 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_3 - 2.6e-08 33.5 0.0 6.8e-08 32.2 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_3 - 0.084 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif NPR3 PF03666.13 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_3 - 0.26 10.1 13.3 0.32 9.7 13.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CobT PF06213.12 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_3 - 1.2 8.5 11.8 1.8 7.9 11.8 1.3 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT CDC45 PF02724.14 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_3 - 1.3 7.2 13.1 1.5 7.0 13.1 1.1 1 0 0 1 1 1 0 CDC45-like protein Apt1 PF10351.9 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_3 - 2.5 6.8 11.6 2.9 6.7 11.6 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain SR-25 PF10500.9 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_3 - 6.9 6.2 34.1 0.73 9.4 25.8 2.1 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein Zip PF02535.22 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_3 - 7.1 5.8 5.4 8.8 5.4 5.4 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter TFIIA PF03153.13 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_2 - 0.044 13.8 10.0 0.051 13.6 10.0 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Plasmodium_Vir PF05795.11 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_2 - 0.069 12.6 1.2 0.098 12.1 1.2 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein NPR3 PF03666.13 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_2 - 2.7 6.7 6.6 2.9 6.6 6.6 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_2 - 3.1 6.5 8.7 3.8 6.2 8.7 1.1 1 0 0 1 1 1 0 Presenilin CDC45 PF02724.14 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_2 - 6.7 4.9 8.7 7.6 4.7 8.7 1.1 1 0 0 1 1 1 0 CDC45-like protein Spt20 PF12090.8 NODE_23490_length_878_cov_367.926453_g18234_i0forward_frame_2 - 8.8 5.9 16.9 12 5.4 16.9 1.1 1 0 0 1 1 1 0 Spt20 family Methyltransf_4 PF02390.17 NODE_23460_length_879_cov_334.905213_g18207_i0reverse_frame_2 - 2.8e-18 66.0 0.0 2.8e-18 66.0 0.0 1.7 2 1 0 2 2 2 1 Putative methyltransferase Arb2 PF09757.9 NODE_23460_length_879_cov_334.905213_g18207_i0reverse_frame_2 - 0.12 11.5 2.0 0.25 10.5 2.1 1.5 2 0 0 2 2 2 0 Arb2 domain DUF938 PF06080.12 NODE_23460_length_879_cov_334.905213_g18207_i0reverse_frame_2 - 0.17 11.7 0.0 0.41 10.4 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF938) DUF4093 PF13331.6 NODE_23456_length_879_cov_385.227488_g18203_i0forward_frame_2 - 0.15 12.5 4.5 0.37 11.3 4.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4093) NAD_kinase PF01513.21 ORF98474 - 8.3e-80 268.1 0.0 9.9e-80 267.8 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase EF1G PF00647.19 ORF9650 - 1.5e-41 140.7 0.1 2.5e-41 140.1 0.1 1.3 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_C PF00043.25 ORF9650 - 1.4e-13 50.9 0.8 2.6e-13 50.0 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF9650 - 1.5e-05 24.9 0.0 3e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF9650 - 1.8e-05 24.8 0.0 4.9e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Ribosomal_60s PF00428.19 ORF9650 - 0.01 16.4 5.7 0.022 15.4 5.7 1.5 1 0 0 1 1 1 0 60s Acidic ribosomal protein SHIPPO-rpt PF07004.12 ORF95017 - 0.00017 22.4 21.5 0.26 12.3 2.3 6.2 5 2 0 5 5 5 4 Sperm-tail PG-rich repeat RmuC PF02646.16 ORF94279 - 7.8e-94 314.1 0.5 9e-94 313.9 0.5 1.0 1 0 0 1 1 1 1 RmuC family MaoC_dehydratas PF01575.19 ORF8990 - 2e-26 92.0 0.0 3.6e-26 91.1 0.0 1.4 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 ORF8990 - 1.2e-06 28.7 0.0 0.00015 21.9 0.0 2.2 2 0 0 2 2 2 2 N-terminal half of MaoC dehydratase GAS PF13851.6 ORF87961 - 0.0075 15.6 11.3 0.015 14.6 11.3 1.6 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding DUF745 PF05335.13 ORF87961 - 0.013 15.2 1.2 0.013 15.2 1.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF745) Prominin PF05478.11 ORF87961 - 0.089 10.7 5.9 0.12 10.3 5.9 1.1 1 0 0 1 1 1 0 Prominin HrpB7 PF09486.10 ORF87961 - 0.092 13.1 0.4 0.16 12.3 0.4 1.3 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) bZIP_1 PF00170.21 ORF87961 - 0.11 12.5 6.0 5.3 7.2 1.6 2.6 2 0 0 2 2 2 0 bZIP transcription factor Malic_M PF03949.15 ORF87961 - 0.14 11.4 0.0 0.22 10.8 0.0 1.3 1 0 0 1 1 1 0 Malic enzyme, NAD binding domain Csm1_N PF18504.1 ORF87961 - 0.29 11.5 14.1 0.37 11.1 3.1 3.2 3 0 0 3 3 3 0 Csm1 N-terminal domain Phage_GP20 PF06810.11 ORF87961 - 0.36 10.6 14.0 0.03 14.1 9.2 1.7 2 0 0 2 2 2 0 Phage minor structural protein GP20 ZapB PF06005.12 ORF87961 - 6.7 7.2 13.3 2.9 8.4 2.9 2.9 2 1 1 3 3 3 0 Cell division protein ZapB EF-hand_6 PF13405.6 ORF86302 - 0.00013 21.6 0.0 0.00034 20.3 0.0 1.7 1 0 0 1 1 1 1 EF-hand domain EF-hand_1 PF00036.32 ORF86302 - 0.00073 18.9 0.2 0.0018 17.6 0.0 1.8 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 ORF86302 - 0.019 15.4 0.0 0.04 14.4 0.0 1.6 1 0 0 1 1 1 0 EF-hand domain pair Ion_trans PF00520.31 ORF86302 - 0.021 14.1 0.1 0.031 13.5 0.1 1.3 1 0 0 1 1 1 0 Ion transport protein DUF3847 PF12958.7 ORF86302 - 0.032 14.3 0.1 0.083 13.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3847) EF-hand_5 PF13202.6 ORF86302 - 0.1 12.2 0.0 0.25 10.9 0.0 1.7 1 0 0 1 1 1 0 EF hand DUF2973 PF11189.8 ORF86302 - 0.14 12.3 0.0 0.5 10.5 0.0 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) Mito_carr PF00153.27 ORF76251 - 2.1e-49 165.4 1.2 2e-18 66.1 0.0 3.0 2 1 1 3 3 3 3 Mitochondrial carrier protein Tim17 PF02466.19 ORF76251 - 0.00031 21.1 1.6 0.11 12.9 1.2 2.7 1 1 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family SNARE PF05739.19 ORF76206 - 1.7e-05 24.7 0.2 1.7e-05 24.7 0.2 3.2 3 0 0 3 3 3 1 SNARE domain Synaptobrevin PF00957.21 ORF76206 - 0.023 14.5 0.1 0.076 12.8 0.1 2.0 1 0 0 1 1 1 0 Synaptobrevin HIP1_clath_bdg PF16515.5 ORF76206 - 0.024 15.3 2.2 0.024 15.3 2.2 3.2 1 1 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF1542 PF07564.11 ORF76206 - 0.035 14.2 1.1 0.035 14.2 1.1 3.9 4 1 0 4 4 4 0 Domain of Unknown Function (DUF1542) NapD PF03927.13 ORF76206 - 0.046 13.8 0.2 0.099 12.7 0.2 1.6 1 0 0 1 1 1 0 NapD protein PMEI PF04043.15 ORF76206 - 0.12 12.7 2.6 0.32 11.3 0.2 2.2 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor CemA PF03040.14 ORF76206 - 1.2 9.0 6.6 3.5 7.5 2.4 2.5 1 1 2 3 3 3 0 CemA family Plasmid_RAQPRD PF09686.10 ORF76206 - 2.2 8.6 6.9 6.4 7.1 0.1 3.5 3 0 0 3 3 3 0 Plasmid protein of unknown function (Plasmid_RAQPRD) Histone_HNS PF00816.21 ORF76206 - 9.3 7.2 8.9 32 5.5 0.1 3.4 3 2 0 3 3 3 0 H-NS histone family FAM176 PF14851.6 ORF7583 - 0.48 10.1 3.4 0.47 10.1 0.4 2.1 2 0 0 2 2 2 0 FAM176 family Thioredoxin PF00085.20 ORF72683 - 8.4e-24 83.5 1.0 1.8e-23 82.5 0.5 1.8 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_6 PF13848.6 ORF72683 - 5.3e-11 42.8 7.2 8e-06 25.9 1.2 2.4 1 1 0 2 2 2 2 Thioredoxin-like domain Thioredoxin_2 PF13098.6 ORF72683 - 0.00023 21.6 5.3 0.0013 19.2 0.9 2.8 2 1 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 ORF72683 - 0.00025 21.2 0.9 0.001 19.2 0.2 2.4 3 0 0 3 3 3 1 Thioredoxin-like Thioredoxin_8 PF13905.6 ORF72683 - 0.00085 19.6 0.4 0.00085 19.6 0.4 2.6 2 1 0 2 2 2 1 Thioredoxin-like ERp29_N PF07912.13 ORF72683 - 0.0032 17.6 1.1 0.011 15.9 0.3 2.1 2 0 0 2 2 2 1 ERp29, N-terminal domain AhpC-TSA PF00578.21 ORF72683 - 0.039 13.9 2.4 0.045 13.7 0.7 2.1 1 1 1 2 2 2 0 AhpC/TSA family MaoC_dehydratas PF01575.19 ORF69918 - 4.4e-27 94.1 0.0 1e-26 92.9 0.0 1.5 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 ORF69918 - 6.2e-06 26.4 0.0 2.3e-05 24.5 0.0 1.9 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase DUF3306 PF11748.8 ORF67850 - 0.67 10.8 4.8 0.3 11.9 0.6 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3306) DeoC PF01791.9 ORF6565 - 7.2e-58 196.0 0.1 8.3e-58 195.8 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase Fibroin_P25 PF07294.11 ORF6565 - 0.17 11.9 0.0 0.27 11.3 0.0 1.2 1 0 0 1 1 1 0 Fibroin P25 EF-hand_1 PF00036.32 ORF6199 - 0.024 14.2 1.9 0.056 13.0 0.3 2.5 2 0 0 2 2 2 0 EF hand TSNAXIP1_N PF15739.5 ORF6199 - 0.035 14.5 0.6 0.087 13.2 0.6 1.6 1 0 0 1 1 1 0 Translin-associated factor X-interacting N-terminus EF-hand_7 PF13499.6 ORF6199 - 0.05 14.0 0.5 0.05 14.0 0.5 2.2 2 1 0 2 2 2 0 EF-hand domain pair EF-hand_6 PF13405.6 ORF6199 - 0.059 13.3 0.1 0.059 13.3 0.1 2.8 3 0 0 3 3 3 0 EF-hand domain EF-hand_4 PF12763.7 ORF6199 - 0.74 9.8 3.7 11 6.0 0.9 2.5 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand HrpB_C PF08482.10 ORF59088 - 0.026 14.9 0.6 0.049 14.0 0.6 1.5 1 0 0 1 1 1 0 ATP-dependent helicase C-terminal RNR_Alpha PF17975.1 ORF59088 - 0.065 13.7 0.2 0.065 13.7 0.2 3.1 4 0 0 4 4 4 0 Ribonucleotide reductase alpha domain BUD22 PF09073.10 ORF59088 - 1.6 8.0 30.6 2 7.6 30.6 1.0 1 0 0 1 1 1 0 BUD22 DUF3772 PF12607.8 ORF57303 - 0.042 13.6 0.1 0.09 12.5 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3772) CotJB PF12652.7 ORF55469 - 0.76 10.0 4.4 6.5 7.0 0.1 3.4 3 1 0 3 3 3 0 CotJB protein FSH1 PF03959.13 ORF55421 - 1.1e-25 90.6 0.0 1.4e-25 90.2 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase (FSH1) P_C10 PF14974.6 ORF53394 - 0.0097 16.0 0.0 0.032 14.3 0.0 1.8 2 0 0 2 2 2 1 Protein C10 MaoC_dehydratas PF01575.19 ORF49706 - 1.1e-26 92.7 0.0 1.8e-26 92.1 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 ORF49706 - 7.2e-06 26.2 0.0 2.7e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase DUF5318 PF17249.2 ORF49371 - 0.12 12.2 0.8 0.21 11.4 0.3 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5318) DUF2203 PF09969.9 ORF47699 - 0.5 11.1 4.4 0.1 13.3 0.8 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) DUF659 PF04937.15 ORF43013 - 0.006 16.4 0.4 0.011 15.6 0.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF 659) SpoIIID PF12116.8 ORF43013 - 0.066 13.3 2.8 4.7 7.4 0.2 2.3 2 0 0 2 2 2 0 Stage III sporulation protein D Abhydrolase_3 PF07859.13 ORF28130 - 4.2e-05 23.5 0.0 6.7e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF1295 PF06966.12 ORF2752 - 7.3e-54 182.8 3.2 9.6e-54 182.4 3.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 ORF2752 - 1.5e-05 25.0 0.2 5e-05 23.3 0.2 1.9 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF2752 - 0.00038 20.8 0.2 0.036 14.5 0.0 2.8 2 1 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 ORF2752 - 0.012 16.0 0.0 0.012 16.0 0.0 2.3 3 0 0 3 3 3 0 Phospholipid methyltransferase ERG4_ERG24 PF01222.17 ORF2752 - 0.063 12.0 0.2 0.12 11.2 0.2 1.4 1 0 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family MaoC_dehydratas PF01575.19 ORF26078 - 4.6e-27 94.0 0.0 1e-26 92.9 0.0 1.5 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 ORF26078 - 6.5e-06 26.3 0.0 2.4e-05 24.5 0.0 1.8 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase SET PF00856.28 ORF20565 - 0.0011 19.4 0.0 0.002 18.6 0.0 1.4 1 0 0 1 1 1 1 SET domain HrpB_C PF08482.10 ORF18955 - 0.026 14.9 0.6 0.049 14.0 0.6 1.5 1 0 0 1 1 1 0 ATP-dependent helicase C-terminal RNR_Alpha PF17975.1 ORF18955 - 0.065 13.7 0.2 0.065 13.7 0.2 3.1 4 0 0 4 4 4 0 Ribonucleotide reductase alpha domain BUD22 PF09073.10 ORF18955 - 1.6 8.0 30.6 2 7.6 30.6 1.0 1 0 0 1 1 1 0 BUD22 JAB PF01398.21 ORF16838 - 1.8e-14 53.7 0.0 5.2e-14 52.2 0.0 1.7 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 ORF16838 - 1.1e-12 48.3 1.3 2.3e-12 47.3 1.3 1.5 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function DHHC PF01529.20 ORF149925 - 2.6e-33 115.0 16.2 2.6e-33 115.0 16.2 2.1 2 0 0 2 2 2 1 DHHC palmitoyltransferase DUF3533 PF12051.8 ORF149925 - 0.17 10.8 7.9 0.31 9.9 7.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3533) CorC_HlyC PF03471.17 ORF148613 - 1.1e-23 83.0 1.2 2.3e-23 82.0 0.0 2.2 3 0 0 3 3 3 1 Transporter associated domain CBS PF00571.28 ORF148613 - 2.3e-15 56.7 2.1 7e-08 32.8 0.2 2.5 2 0 0 2 2 2 2 CBS domain Ribosomal_L28e PF01778.17 ORF146082 - 0.062 14.0 4.2 2.6 8.8 0.2 2.3 2 0 0 2 2 2 0 Ribosomal L28e protein family CompInhib_SCIN PF11546.8 ORF146082 - 3.5 7.7 7.5 2.2 8.3 1.4 2.6 2 1 0 2 2 2 0 Staphylococcal complement inhibitor SCIN DUF724 PF05266.14 ORF146082 - 6.8 6.5 23.6 3.4 7.5 8.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DGOK PF05035.12 ORF143689 - 4e-97 324.5 0.4 4.5e-97 324.4 0.4 1.0 1 0 0 1 1 1 1 2-keto-3-deoxy-galactonokinase Mito_carr PF00153.27 ORF140052 - 5.4e-50 167.3 4.4 2e-20 72.5 0.1 3.0 2 1 1 3 3 3 3 Mitochondrial carrier protein Cyclin PF08613.11 ORF136611 - 4.1e-13 50.0 1.3 9.7e-13 48.8 0.2 1.9 2 0 0 2 2 2 1 Cyclin Cyclin_N PF00134.23 ORF136611 - 2.5e-09 37.0 0.1 2.5e-09 37.0 0.1 1.6 2 0 0 2 2 2 1 Cyclin, N-terminal domain SMC_N PF02463.19 ORF133011 - 5.5e-30 104.4 0.5 1.5e-29 103.0 0.4 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF133011 - 2.5e-08 34.1 0.0 3e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 ORF133011 - 0.00032 20.5 0.4 0.00042 20.1 0.4 1.1 1 0 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 ORF133011 - 0.00058 20.4 0.7 0.0011 19.5 0.3 1.7 2 0 0 2 2 2 1 ABC transporter Sld5 PF05916.11 ORF133011 - 0.048 14.1 0.3 0.34 11.4 0.1 2.1 2 0 0 2 2 2 0 GINS complex protein SbcCD_C PF13558.6 ORF133011 - 0.082 13.2 0.6 0.41 10.9 0.1 2.4 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit BLOC1_2 PF10046.9 ORF133011 - 0.15 12.3 2.3 0.45 10.9 1.9 2.0 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 AAA PF00004.29 ORF133011 - 0.16 12.4 0.4 0.49 10.8 0.0 2.0 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IPK PF03770.16 ORF129306 - 3.6e-16 59.6 0.0 5.3e-15 55.8 0.0 2.4 1 1 0 1 1 1 1 Inositol polyphosphate kinase PALP PF00291.25 ORF128266 - 4.9e-07 29.4 0.0 8e-07 28.8 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TRP PF06011.12 ORF124249 - 0.00016 20.6 8.4 0.0015 17.3 8.4 2.1 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel Shisa PF13908.6 ORF124249 - 0.00045 20.5 0.5 0.00045 20.5 0.5 2.1 2 1 1 3 3 3 1 Wnt and FGF inhibitory regulator FAM176 PF14851.6 ORF124249 - 0.0015 18.2 2.3 0.0015 18.2 2.3 2.1 2 1 1 3 3 3 1 FAM176 family Peroxin-3 PF04882.12 ORF124249 - 0.016 14.2 2.7 0.02 13.9 2.7 1.1 1 0 0 1 1 1 0 Peroxin-3 SIMPL PF04402.14 ORF124249 - 0.023 15.2 0.5 0.031 14.7 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF541) C_GCAxxG_C_C PF09719.10 ORF124249 - 0.024 14.9 0.7 0.038 14.3 0.7 1.4 1 0 0 1 1 1 0 Putative redox-active protein (C_GCAxxG_C_C) Peptidase_S49_N PF08496.10 ORF124249 - 0.086 12.9 2.4 1.8 8.6 1.1 2.4 2 0 0 2 2 2 0 Peptidase family S49 N-terminal Hid1 PF12722.7 ORF124249 - 0.12 10.5 3.5 0.15 10.2 3.5 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein SpoIIM PF01944.17 ORF124249 - 0.92 9.5 7.8 1.1e+02 2.7 0.0 3.0 2 1 0 2 2 2 0 Stage II sporulation protein M FixQ PF05545.11 ORF124249 - 1 9.4 7.5 4.7 7.3 0.0 3.3 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ SDP_N PF12278.8 ORF124249 - 1.1 9.4 10.6 1.8 8.7 10.6 1.3 1 0 0 1 1 1 0 Sex determination protein N terminal ABC2_membrane_5 PF13346.6 ORF124249 - 7.6 6.0 20.2 0.12 11.9 2.2 3.1 1 1 1 3 3 3 0 ABC-2 family transporter protein Thioredoxin PF00085.20 ORF122195 - 0.00089 19.2 0.0 0.0017 18.3 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin SHE3 PF17078.5 ORF122195 - 0.029 14.1 0.3 0.041 13.6 0.3 1.2 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 PerC PF06069.11 ORF122195 - 0.13 12.6 0.2 0.25 11.6 0.2 1.4 1 0 0 1 1 1 0 PerC transcriptional activator Epimerase_2 PF02350.19 ORF121056 - 0.021 13.7 0.1 0.028 13.3 0.1 1.1 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase MscL PF01741.18 ORF121056 - 0.025 14.9 0.3 0.055 13.8 0.3 1.5 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL ERGIC_N PF13850.6 ORF121056 - 0.029 14.7 2.7 0.034 14.5 0.5 2.3 2 1 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) EphA2_TM PF14575.6 ORF121056 - 0.075 13.9 0.1 0.9 10.5 0.0 2.2 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Oxidored_q3 PF00499.20 ORF121056 - 0.081 12.6 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DeoC PF01791.9 ORF118406 - 7.2e-58 196.0 0.1 8.3e-58 195.8 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase Fibroin_P25 PF07294.11 ORF118406 - 0.17 11.9 0.0 0.27 11.3 0.0 1.2 1 0 0 1 1 1 0 Fibroin P25 ABC_tran PF00005.27 ORF117006 - 1.9e-31 109.4 0.0 3.4e-31 108.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF117006 - 3.9e-10 39.6 3.0 6.2e-09 35.6 0.8 2.4 2 1 1 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 ORF117006 - 0.00064 20.1 0.0 0.0013 19.2 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF117006 - 0.0015 18.8 0.2 0.014 15.7 0.2 2.3 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 ORF117006 - 0.0075 16.7 0.1 2.1 8.8 0.1 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 ORF117006 - 0.01 16.0 0.3 0.11 12.7 0.3 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 ORF117006 - 0.018 14.8 1.0 0.04 13.6 1.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 ORF117006 - 0.02 14.6 0.0 0.041 13.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 ORF117006 - 0.03 14.3 0.0 0.071 13.0 0.0 1.6 1 0 0 1 1 1 0 Rad17 P-loop domain NTPase_1 PF03266.15 ORF117006 - 0.036 14.0 0.2 2.2 8.1 0.0 2.4 2 1 0 2 2 2 0 NTPase AAA_14 PF13173.6 ORF117006 - 0.038 14.0 0.0 0.25 11.4 0.0 2.1 1 1 1 2 2 2 0 AAA domain DUF2075 PF09848.9 ORF117006 - 0.043 13.1 2.5 0.085 12.1 0.5 2.3 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ATP-synt_ab PF00006.25 ORF117006 - 0.049 13.3 0.0 0.077 12.6 0.0 1.4 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain PRK PF00485.18 ORF117006 - 0.073 12.8 0.0 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_7 PF12775.7 ORF117006 - 0.077 12.5 0.0 0.17 11.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_5 PF07728.14 ORF117006 - 0.078 13.0 0.0 0.99 9.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 ORF117006 - 0.081 12.8 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase DUF87 PF01935.17 ORF117006 - 0.097 12.7 0.2 0.96 9.5 0.0 2.1 2 1 0 2 2 2 0 Helicase HerA, central domain Viral_helicase1 PF01443.18 ORF117006 - 0.1 12.3 0.0 0.23 11.2 0.0 1.7 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Ank_2 PF12796.7 ORF114780 - 4.6e-14 52.8 0.2 1.8e-11 44.5 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF114780 - 2.5e-10 40.7 1.6 6.3e-09 36.2 0.1 3.4 4 0 0 4 4 4 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF114780 - 3.5e-08 33.5 4.4 0.15 12.6 0.1 3.8 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF114780 - 1.7e-06 27.9 4.8 0.052 14.1 0.0 4.5 5 0 0 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF114780 - 0.00046 20.4 2.5 0.27 11.6 0.0 3.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Band_7 PF01145.25 ORF112333 - 2.3e-29 102.7 0.0 3.3e-29 102.1 0.0 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family MetOD1 PF18546.1 ORF112333 - 0.0083 16.1 0.2 0.57 10.1 0.0 2.3 2 0 0 2 2 2 1 Metanogen output domain 1 Band_7_C PF16200.5 ORF112333 - 0.018 15.1 0.0 0.049 13.7 0.0 1.7 1 0 0 1 1 1 0 C-terminal region of band_7 SCAB_CC PF16712.5 ORF112333 - 0.042 13.7 1.4 0.074 12.9 1.4 1.4 1 0 0 1 1 1 0 Coiled-coil regions of plant-specific actin-binding protein MLTR_LBD PF17765.1 ORF112333 - 0.082 13.0 0.0 0.22 11.7 0.0 1.7 2 1 0 2 2 2 0 MmyB-like transcription regulator ligand binding domain FliL PF03748.14 ORF112333 - 0.11 13.1 0.1 0.24 12.0 0.1 1.6 1 0 0 1 1 1 0 Flagellar basal body-associated protein FliL V-ATPase_G PF03179.15 ORF112333 - 0.27 11.8 4.7 0.76 10.3 2.5 2.5 2 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit EMP24_GP25L PF01105.24 ORF110837 - 0.13 12.2 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD TCR PF03638.15 ORF108990 - 8.1 6.9 11.1 0.82 10.0 4.1 2.5 2 0 0 2 2 2 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain PTE PF02126.18 ORF108942 - 6.7e-143 475.5 0.5 7.4e-143 475.4 0.5 1.0 1 0 0 1 1 1 1 Phosphotriesterase family TAL_effector PF03377.13 ORF108942 - 0.16 12.3 0.3 0.48 10.8 0.0 1.9 2 0 0 2 2 2 0 TAL effector repeat DUF4220 PF13968.6 ORF108223 - 0.0096 15.4 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4220) ELO PF01151.18 ORF108223 - 0.021 14.3 0.8 0.021 14.3 0.8 2.3 2 1 0 2 2 2 0 GNS1/SUR4 family 2TM PF13239.6 ORF108223 - 0.4 11.0 5.7 0.29 11.5 1.6 2.5 2 0 0 2 2 2 0 2TM domain OAD_gamma PF04277.13 ORF108223 - 5.6 7.6 5.2 16 6.2 0.0 3.2 2 1 1 3 3 3 0 Oxaloacetate decarboxylase, gamma chain TRP PF06011.12 ORF106531 - 0.076 11.7 4.3 0.13 10.9 4.3 1.4 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Alpha_TIF PF02232.15 ORF104974 - 0.019 14.1 0.1 0.026 13.6 0.1 1.1 1 0 0 1 1 1 0 Alpha trans-inducing protein (Alpha-TIF) LRAT PF04970.13 ORF104974 - 3.3 8.0 7.6 2.1 8.7 1.7 2.4 1 1 1 2 2 2 0 Lecithin retinol acyltransferase MaoC_dehydratas PF01575.19 ORF104581 - 1.1e-26 92.7 0.0 1.8e-26 92.1 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 ORF104581 - 7.2e-06 26.2 0.0 2.7e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase UPF0172 PF03665.13 ORF103304 - 0.015 15.3 0.7 0.032 14.3 0.7 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0172) zf-C2H2 PF00096.26 ORF103304 - 0.025 15.0 0.5 0.12 12.9 0.5 2.3 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF103304 - 0.058 14.3 0.5 0.21 12.5 0.5 2.1 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF103304 - 0.12 12.2 0.1 0.22 11.3 0.1 1.4 1 0 0 1 1 1 0 zinc-finger C2H2-type DUF3237 PF11578.8 NODE_23777_length_871_cov_76.138756_g18474_i0forward_frame_1 - 0.088 12.7 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) zf-RING_2 PF13639.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 3.7e-10 40.0 2.2 3.7e-10 40.0 2.2 3.5 4 0 0 4 4 3 1 Ring finger domain zf-RING_11 PF17123.5 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 1.4e-06 27.9 4.6 1.4e-06 27.9 4.6 2.3 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 1.4e-06 28.0 1.6 1.4e-06 28.0 1.6 3.2 4 0 0 4 4 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 4.4e-06 26.9 3.7 4.4e-06 26.9 3.7 2.8 3 1 0 3 3 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 4.5e-06 26.4 1.4 4.5e-06 26.4 1.4 2.5 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 1.2e-05 25.2 2.8 1.2e-05 25.2 2.8 2.6 2 0 0 2 2 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 1.3e-05 24.9 2.1 1.3e-05 24.9 2.1 3.1 4 0 0 4 4 3 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 5.3e-05 23.1 1.0 5.3e-05 23.1 1.0 3.6 4 1 0 4 4 3 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 0.0097 15.5 2.5 0.0097 15.5 2.5 3.1 3 0 0 3 3 2 1 Zinc-ribbon, C4HC2 type DUF4834 PF16118.5 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 0.18 12.8 2.2 0.64 11.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) DUF4577 PF15145.6 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_1 - 1.7 8.7 5.7 0.3 11.1 0.3 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4577) Rhomboid PF01694.22 NODE_23713_length_873_cov_1.942721_g18419_i0reverse_frame_1 - 3.5e-06 27.1 1.6 3.5e-06 27.1 1.6 2.8 2 1 1 3 3 3 1 Rhomboid family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks65.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks65.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks65.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks65.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF4042 PF13251.6 NODE_23680_length_873_cov_450.700477_g3293_i6reverse_frame_1 - 0.042 13.6 0.7 0.1 12.3 0.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) DUF4841 PF16129.5 NODE_23643_length_874_cov_255.876043_g18362_i0forward_frame_2 - 0.056 13.7 0.1 0.11 12.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4841) zf-C2H2_7 PF15269.6 NODE_23599_length_875_cov_670.060714_g18324_i0reverse_frame_3 - 0.025 14.7 0.0 0.059 13.5 0.0 1.6 1 0 0 1 1 1 0 Zinc-finger CxC1 PF18802.1 NODE_23579_length_876_cov_135.839477_g18306_i0reverse_frame_2 - 0.16 12.1 1.3 0.23 11.6 0.1 2.0 2 0 0 2 2 2 0 CxC1 like cysteine cluster associated with KDZ transposases Methyltransf_3 PF01596.17 NODE_23570_length_876_cov_292.730083_g18297_i0reverse_frame_2 - 4.4e-08 32.6 0.0 6.4e-08 32.0 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase MCH PF02289.16 NODE_23570_length_876_cov_292.730083_g18297_i0forward_frame_3 - 0.16 11.2 0.0 0.33 10.2 0.0 1.4 1 0 0 1 1 1 0 Cyclohydrolase (MCH) TMEMspv1-c74-12 PF11044.8 NODE_23569_length_876_cov_307.488704_g18296_i0reverse_frame_2 - 0.21 11.6 0.2 0.46 10.5 0.2 1.5 1 0 0 1 1 1 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein ubiquitin PF00240.23 NODE_23569_length_876_cov_307.488704_g18296_i0forward_frame_3 - 4.3e-08 32.8 0.0 7.5e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family YukD PF08817.10 NODE_23569_length_876_cov_307.488704_g18296_i0forward_frame_3 - 0.033 14.9 0.1 0.072 13.8 0.1 1.7 1 1 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD zf-C2H2 PF00096.26 ORF97340 - 3.1e-10 39.9 28.3 9.5e-05 22.6 3.7 3.7 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF97340 - 6.2e-07 29.6 16.0 8.7e-05 22.8 2.1 4.5 4 0 0 4 4 4 2 Zinc-finger double domain zf-met PF12874.7 ORF97340 - 3e-05 24.3 11.6 0.48 10.9 3.1 3.9 3 0 0 3 3 3 3 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 ORF97340 - 0.00073 20.2 30.2 0.007 17.1 3.3 4.2 4 0 0 4 4 4 2 C2H2-type zinc finger C1_1 PF00130.22 ORF97340 - 0.025 14.4 2.6 0.025 14.4 2.6 2.5 3 0 0 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-H2C2_5 PF13909.6 ORF97340 - 0.034 13.9 3.8 0.034 13.9 3.8 3.4 4 0 0 4 4 4 0 C2H2-type zinc-finger domain zf-C2H2_jaz PF12171.8 ORF97340 - 6.7 7.1 17.1 2.5 8.5 2.0 4.1 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 ORF97340 - 6.9 6.5 12.5 0.36 10.6 1.1 3.1 3 0 0 3 3 3 0 zinc-finger C2H2-type Tmemb_40 PF10160.9 ORF96398 - 0.012 15.1 0.0 0.017 14.6 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein His_Phos_1 PF00300.22 ORF96145 - 5.2e-29 101.3 0.0 6.8e-29 101.0 0.0 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) MM_CoA_mutase PF01642.22 ORF96145 - 0.13 10.8 0.1 0.19 10.3 0.1 1.1 1 0 0 1 1 1 0 Methylmalonyl-CoA mutase adh_short_C2 PF13561.6 ORF91967 - 1.1e-60 205.1 0.2 1.3e-60 204.8 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF91967 - 2.5e-51 173.9 0.1 3e-51 173.7 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Epimerase PF01370.21 ORF91967 - 8.5e-08 32.0 0.0 1.4e-07 31.2 0.0 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family KR PF08659.10 ORF91967 - 1.4e-07 31.6 0.2 3e-07 30.5 0.2 1.5 1 1 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 ORF91967 - 0.0011 18.3 0.0 0.0024 17.2 0.0 1.7 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GDP_Man_Dehyd PF16363.5 ORF91967 - 0.016 14.6 0.0 2 7.7 0.0 2.2 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase Pyr_redox PF00070.27 ORF91967 - 0.031 14.8 0.0 0.079 13.5 0.0 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ADH_zinc_N PF00107.26 ORF91967 - 0.098 12.6 0.2 0.25 11.3 0.2 1.8 1 1 0 1 1 1 0 Zinc-binding dehydrogenase Acyltransferase PF01553.21 ORF8890 - 7.1e-14 51.6 0.1 1.1e-13 50.9 0.1 1.2 1 0 0 1 1 1 1 Acyltransferase ArfGap PF01412.18 ORF88206 - 6.8e-23 81.0 0.1 1.2e-22 80.2 0.1 1.3 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf MMR_HSR1_Xtn PF16897.5 ORF85312 - 1.1 9.3 6.7 0.96 9.5 1.4 2.9 2 1 1 3 3 3 0 C-terminal region of MMR_HSR1 domain Ion_trans PF00520.31 ORF84081 - 1.2e-11 44.3 2.3 1.9e-11 43.7 2.3 1.3 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF84081 - 1.6e-09 36.9 2.7 0.00013 21.6 0.1 3.7 3 0 0 3 3 3 2 EF-hand domain EF-hand_7 PF13499.6 ORF84081 - 9.5e-09 35.6 1.7 0.0015 18.9 0.1 3.0 1 1 2 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF84081 - 4.9e-07 28.8 3.9 0.0009 18.6 0.1 3.5 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF84081 - 6.2e-06 26.0 6.0 0.00028 20.7 5.7 3.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF84081 - 1.8e-05 24.0 2.0 0.0026 17.2 0.1 3.2 3 0 0 3 3 3 1 EF hand EF-hand_10 PF14788.6 ORF84081 - 0.0032 17.3 0.1 0.098 12.5 0.5 2.3 2 0 0 2 2 2 1 EF hand EF-hand_4 PF12763.7 ORF84081 - 0.032 14.2 0.4 0.062 13.3 0.4 1.4 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand CT47 PF15623.6 ORF83524 - 1.6 8.5 22.1 2.3 8.0 22.1 1.2 1 0 0 1 1 1 0 Cancer/testis gene family 47 Fer4_13 PF13370.6 ORF82282 - 1.5e-06 28.6 1.9 2.8e-06 27.8 0.6 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 ORF82282 - 1.7e-05 25.4 2.5 1.7e-05 25.4 2.5 2.9 2 2 0 2 2 2 1 4Fe-4S single cluster domain Fer4 PF00037.27 ORF82282 - 0.0017 18.1 4.5 0.23 11.3 1.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain EF-hand_7 PF13499.6 ORF82282 - 0.017 15.6 0.2 0.085 13.3 0.3 2.2 2 1 0 2 2 2 0 EF-hand domain pair SMP PF04927.12 ORF82282 - 0.11 12.9 1.4 0.19 12.2 0.6 1.8 1 1 0 1 1 1 0 Seed maturation protein Fer4_6 PF12837.7 ORF82282 - 0.14 12.2 3.9 0.8 9.9 1.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain EF-hand_5 PF13202.6 ORF82282 - 0.21 11.2 0.8 0.41 10.2 0.1 1.9 2 0 0 2 2 2 0 EF hand RCC1_2 PF13540.6 ORF78877 - 1.1e-09 37.9 2.1 0.29 11.0 0.0 4.6 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF78877 - 0.0014 18.8 0.1 3.5 7.7 0.0 3.7 3 1 0 3 3 3 1 Uncharacterised ACR, YagE family COG1723 PH_TFIIH PF08567.11 ORF78877 - 0.002 18.4 5.0 13 6.2 0.0 4.4 3 2 2 5 5 5 2 TFIIH p62 subunit, N-terminal domain XRCC1_N PF01834.16 ORF78877 - 0.18 11.8 2.1 20 5.2 0.1 3.1 1 1 3 4 4 4 0 XRCC1 N terminal domain ubiquitin PF00240.23 ORF7852 - 0.0034 17.1 0.0 0.032 14.0 0.0 2.2 2 0 0 2 2 2 1 Ubiquitin family EF-hand_7 PF13499.6 ORF7852 - 0.0051 17.2 0.0 0.009 16.4 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF7852 - 0.03 14.3 0.0 0.21 11.6 0.0 2.1 2 0 0 2 2 2 0 EF-hand domain EF-hand_1 PF00036.32 ORF7852 - 0.15 11.6 0.0 0.36 10.5 0.0 1.7 2 0 0 2 2 2 0 EF hand NAD_binding_2 PF03446.15 ORF76176 - 3e-42 144.5 1.1 4e-42 144.1 1.1 1.1 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF76176 - 6.7e-32 110.3 0.1 2.3e-31 108.5 0.0 1.9 2 0 0 2 2 2 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HCO3_cotransp PF00955.21 ORF73344 - 6e-64 216.7 0.1 7e-64 216.5 0.1 1.1 1 0 0 1 1 1 1 HCO3- transporter family IL13 PF03487.13 ORF67404 - 0.12 12.1 0.2 0.12 12.1 0.2 2.1 2 0 0 2 2 2 0 Interleukin-13 Aspzincin_M35 PF14521.6 ORF57567 - 0.16 12.6 0.0 0.24 11.9 0.0 1.2 1 0 0 1 1 1 0 Lysine-specific metallo-endopeptidase Aa_trans PF01490.18 ORF56076 - 1.1e-15 57.3 6.1 1.6e-15 56.8 6.1 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Melibiase_2 PF16499.5 ORF52190 - 8.5e-15 54.7 0.6 1.5e-14 53.9 0.6 1.4 1 1 0 1 1 1 1 Alpha galactosidase A Melibiase_C PF17801.1 ORF52190 - 2.7e-08 33.8 0.1 8.7e-08 32.1 0.0 1.9 3 0 0 3 3 3 1 Alpha galactosidase C-terminal beta sandwich domain Spem1 PF15670.5 ORF4898 - 1.8 8.1 6.3 0.32 10.5 2.1 1.8 1 1 1 2 2 2 0 Spermatid maturation protein 1 Zn_ribbon_17 PF17120.5 ORF48266 - 3 7.5 6.7 0.14 11.8 0.5 2.0 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type SieB PF14163.6 ORF47066 - 1.4 8.4 4.2 0.25 10.8 0.5 1.7 2 0 0 2 2 2 0 Super-infection exclusion protein B SMAP PF15477.6 ORF43919 - 0.083 13.9 0.7 0.2 12.6 0.7 1.6 1 0 0 1 1 1 0 Small acidic protein family TFA2_Winged_2 PF18121.1 ORF40844 - 0.012 15.2 0.1 0.35 10.6 0.0 3.2 4 1 0 4 4 4 0 TFA2 Winged helix domain 2 PDZ PF00595.24 ORF39395 - 0.0035 17.6 0.0 0.007 16.7 0.0 1.4 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 ORF39395 - 0.0071 16.2 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 PDZ domain T3SS_basalb_I PF17001.5 ORF39395 - 0.021 15.4 0.1 0.058 14.0 0.1 1.7 1 0 0 1 1 1 0 Type III secretion basal body protein I, YscI, HrpB, PscI HTH_Tnp_1 PF01527.20 ORF39395 - 0.046 14.0 2.0 14 6.1 0.2 3.1 2 0 0 2 2 2 0 Transposase SHIPPO-rpt PF07004.12 ORF38145 - 0.03 15.3 19.4 0.4 11.7 0.1 5.7 6 0 0 6 6 6 0 Sperm-tail PG-rich repeat MMR_HSR1 PF01926.23 ORF37686 - 7.8e-16 58.2 0.0 1.3e-15 57.4 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF37686 - 2.8e-06 27.0 0.0 4.3e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF37686 - 0.00027 21.0 0.8 0.044 13.9 0.3 2.8 2 1 1 3 3 3 2 Dynamin family RsgA_GTPase PF03193.16 ORF37686 - 0.0057 16.6 0.1 0.01 15.8 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AIG1 PF04548.16 ORF37686 - 0.17 11.2 0.0 0.27 10.5 0.0 1.2 1 0 0 1 1 1 0 AIG1 family Phage_holin_6_1 PF09682.10 ORF33519 - 0.029 14.8 0.1 0.076 13.4 0.1 1.8 1 0 0 1 1 1 0 Bacteriophage holin of superfamily 6 (Holin_LLH) CENP-F_leu_zip PF10473.9 ORF33519 - 0.5 10.4 4.3 0.82 9.7 0.4 2.4 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FapA PF03961.13 ORF33519 - 0.55 8.8 7.3 0.041 12.5 1.5 1.8 1 1 1 2 2 2 0 Flagellar Assembly Protein A TAP42 PF04177.12 ORF31182 - 5.7e-52 176.8 1.0 6.5e-52 176.6 1.0 1.0 1 0 0 1 1 1 1 TAP42-like family ADP_ribosyl_GH PF03747.14 ORF31182 - 0.087 12.5 0.2 0.087 12.5 0.2 1.8 2 0 0 2 2 2 0 ADP-ribosylglycohydrolase BET PF17035.5 ORF29636 - 1.1e-10 41.5 0.2 1.1e-09 38.4 0.0 2.5 2 0 0 2 2 2 1 Bromodomain extra-terminal - transcription regulation PET PF06297.14 ORF29636 - 0.018 15.3 0.8 0.16 12.3 0.1 2.7 3 0 0 3 3 3 0 PET Domain DUF4919 PF16266.5 ORF29636 - 0.042 13.8 2.0 0.078 12.9 0.6 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4919) KMP11 PF03037.16 ORF29636 - 0.81 10.5 5.0 9.4 7.1 1.6 2.7 2 0 0 2 2 2 0 Kinetoplastid membrane protein 11 YqzH PF14164.6 ORF29636 - 1.6 8.9 5.4 6.3 6.9 0.3 3.6 3 1 1 4 4 4 0 YqzH-like protein O-antigen_lig PF13425.6 ORF29636 - 8.5 5.0 7.8 20 3.8 7.8 1.6 1 0 0 1 1 1 0 O-antigen ligase like membrane protein CM_2 PF01817.21 ORF29259 - 0.06 13.7 0.2 0.13 12.6 0.2 1.5 1 0 0 1 1 1 0 Chorismate mutase type II Aa_trans PF01490.18 ORF2466 - 1.1e-15 57.3 6.1 1.6e-15 56.8 6.1 1.2 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein CRAL_TRIO PF00650.20 ORF23638 - 8.2e-13 48.4 1.2 9.9e-13 48.1 0.3 1.6 2 0 0 2 2 2 1 CRAL/TRIO domain EamA PF00892.20 ORF19628 - 1.1e-14 54.8 37.7 3.4e-07 30.5 13.4 2.3 2 0 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 ORF19628 - 6.6e-06 25.6 15.0 6.6e-06 25.6 15.0 1.9 1 1 0 1 1 1 1 Purine nucleobase transmembrane transport DUF2070 PF09843.9 ORF19628 - 0.00018 19.9 15.8 0.00018 19.9 15.8 2.0 1 1 1 2 2 2 1 Predicted membrane protein (DUF2070) RseC_MucC PF04246.12 ORF19628 - 0.91 9.5 15.7 0.48 10.4 0.9 3.3 3 1 1 4 4 4 0 Positive regulator of sigma(E), RseC/MucC PX PF00787.24 ORF193 - 3.4e-09 36.7 1.7 4.5e-09 36.3 0.3 1.9 2 0 0 2 2 2 1 PX domain SLC12 PF03522.15 ORF193 - 0.025 13.6 1.8 0.033 13.2 1.8 1.2 1 0 0 1 1 1 0 Solute carrier family 12 HCO3_cotransp PF00955.21 ORF15786 - 6e-64 216.7 0.1 7e-64 216.5 0.1 1.1 1 0 0 1 1 1 1 HCO3- transporter family FidL_like PF15941.5 ORF149559 - 0.19 12.2 0.3 0.19 12.2 0.3 3.5 4 0 0 4 4 4 0 FidL-like putative membrane protein OATP PF03137.20 ORF149559 - 0.25 9.6 0.5 0.3 9.3 0.5 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family TetR_C_8 PF14278.6 ORF149559 - 7.8 6.7 14.2 7.5 6.7 1.7 3.9 1 1 2 4 4 4 0 Transcriptional regulator C-terminal region Aspzincin_M35 PF14521.6 ORF148159 - 0.16 12.6 0.0 0.24 11.9 0.0 1.2 1 0 0 1 1 1 0 Lysine-specific metallo-endopeptidase zf-C3HC4_3 PF13920.6 ORF144280 - 8.1e-07 28.8 13.5 9.1e-07 28.6 11.0 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF144280 - 9.4e-07 28.6 11.3 5.6e-05 22.9 12.2 2.7 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF144280 - 8.4e-06 25.5 14.8 8.4e-06 25.5 14.8 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF144280 - 8.6e-06 26.0 13.7 8.6e-06 26.0 13.7 2.6 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_4 PF15227.6 ORF144280 - 0.0033 17.6 13.9 0.0033 17.6 13.9 3.3 3 1 0 3 3 3 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 ORF144280 - 0.0035 17.3 14.0 0.098 12.6 14.5 2.8 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF144280 - 0.0049 16.7 19.7 0.0052 16.6 14.5 2.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF144280 - 0.0065 16.7 10.5 0.031 14.6 10.5 2.2 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF144280 - 0.69 10.0 18.6 0.42 10.7 12.4 3.3 2 1 0 2 2 2 0 RING-type zinc-finger FYVE PF01363.21 ORF144280 - 0.85 9.8 14.8 0.48 10.6 11.4 2.3 2 0 0 2 2 2 0 FYVE zinc finger Glyco_hydro_38C PF07748.13 ORF140684 - 6e-22 78.8 0.0 1.1e-21 77.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain DUF5488 PF17590.2 ORF140684 - 0.18 11.5 0.4 0.54 10.0 0.0 1.9 2 0 0 2 2 2 0 Family of unknown function (DUF5488) Spem1 PF15670.5 ORF138962 - 1.8 8.1 6.3 0.32 10.5 2.1 1.8 1 1 1 2 2 2 0 Spermatid maturation protein 1 DivIC PF04977.15 ORF136178 - 1.1 9.1 11.3 59 3.5 0.0 3.1 2 1 0 2 2 2 0 Septum formation initiator ESM4 PF15952.5 ORF136178 - 4.2 7.8 18.0 9.5 6.6 17.1 2.0 1 1 0 1 1 1 0 Enhancer of split M4 family PhoLip_ATPase_C PF16212.5 ORF135554 - 6.1e-56 190.0 2.3 7e-56 189.8 2.3 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal CT47 PF15623.6 ORF134710 - 1.6 8.5 22.1 2.3 8.0 22.1 1.2 1 0 0 1 1 1 0 Cancer/testis gene family 47 Asp PF00026.23 ORF13178 - 3.7e-26 92.3 0.2 4.7e-26 92.0 0.2 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF13178 - 0.014 15.1 0.0 0.023 14.5 0.0 1.3 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal TF_AP-2 PF03299.14 ORF127518 - 0.026 14.5 2.6 0.049 13.6 2.6 1.4 1 0 0 1 1 1 0 Transcription factor AP-2 BCDHK_Adom3 PF10436.9 ORF127518 - 6.2 6.6 8.5 10 5.9 8.5 1.5 1 1 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase TTL PF03133.15 ORF123571 - 1.5e-17 63.6 0.0 5.5e-08 32.3 0.0 2.1 1 1 1 2 2 2 2 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF123571 - 2.4e-06 27.0 0.0 3.4e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp Prenyltrans PF00432.21 ORF119869 - 0.11 12.3 0.0 0.3 10.9 0.0 1.8 1 0 0 1 1 1 0 Prenyltransferase and squalene oxidase repeat zf-C2H2 PF00096.26 ORF111775 - 3.1e-10 39.9 28.3 9.5e-05 22.6 3.7 3.7 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF111775 - 6.2e-07 29.6 16.0 8.7e-05 22.8 2.1 4.5 4 0 0 4 4 4 2 Zinc-finger double domain zf-met PF12874.7 ORF111775 - 3e-05 24.3 11.6 0.48 10.9 3.1 3.9 3 0 0 3 3 3 3 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 ORF111775 - 0.00073 20.2 30.2 0.007 17.1 3.3 4.2 4 0 0 4 4 4 2 C2H2-type zinc finger C1_1 PF00130.22 ORF111775 - 0.025 14.4 2.6 0.025 14.4 2.6 2.5 3 0 0 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-H2C2_5 PF13909.6 ORF111775 - 0.034 13.9 3.8 0.034 13.9 3.8 3.4 4 0 0 4 4 4 0 C2H2-type zinc-finger domain zf-C2H2_jaz PF12171.8 ORF111775 - 6.7 7.1 17.1 2.5 8.5 2.0 4.1 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 ORF111775 - 6.9 6.5 12.5 0.36 10.6 1.1 3.1 3 0 0 3 3 3 0 zinc-finger C2H2-type Glyco_hydro_38C PF07748.13 ORF110935 - 5.4e-21 75.7 0.0 1e-20 74.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Glyco_transf_25 PF01755.17 ORF10843 - 7.2e-05 22.7 0.0 0.0024 17.7 0.0 2.4 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) DUF1681 PF07933.14 ORF10843 - 0.14 11.9 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) zf-RING_2 PF13639.6 ORF105630 - 7.1e-09 35.9 4.1 7.1e-09 35.9 4.1 2.7 3 0 0 3 3 3 1 Ring finger domain zf-rbx1 PF12678.7 ORF105630 - 1.2e-07 31.9 1.7 2.5e-07 30.9 1.7 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF105630 - 1.5e-07 31.0 3.0 5.7e-07 29.2 3.0 2.1 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF105630 - 5e-06 26.4 4.8 5e-06 26.4 4.8 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF105630 - 4.5e-05 23.2 1.7 4.5e-05 23.2 1.7 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF105630 - 0.00021 21.1 3.6 0.00021 21.1 3.6 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF105630 - 0.0066 16.1 2.3 0.02 14.5 2.3 1.8 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_5 PF14634.6 ORF105630 - 0.0084 16.0 2.2 0.0084 16.0 2.2 2.4 2 0 0 2 2 2 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF105630 - 0.02 14.9 2.9 0.038 14.0 2.9 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Glyco_transf_25 PF01755.17 ORF104848 - 7.2e-05 22.7 0.0 0.0024 17.7 0.0 2.4 1 1 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) DUF1681 PF07933.14 ORF104848 - 0.14 11.9 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) MaoC_dehydratas PF01575.19 ORF104315 - 2.4e-27 95.0 0.0 4.4e-27 94.1 0.0 1.4 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 ORF104315 - 2.2e-05 24.6 0.0 0.00018 21.6 0.0 2.1 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase zf-RING_13 PF17977.1 ORF104315 - 0.035 14.3 0.1 0.087 13.0 0.1 1.7 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain SieB PF14163.6 ORF102796 - 1.4 8.4 4.2 0.25 10.8 0.5 1.7 2 0 0 2 2 2 0 Super-infection exclusion protein B DUF2817 PF10994.8 ORF100688 - 9.4e-37 127.2 0.0 1.8e-28 100.0 0.0 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF2817) AcetylCoA_hyd_C PF13336.6 NODE_23886_length_868_cov_83.286915_g18563_i0reverse_frame_1 - 0.075 13.0 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase C-terminal domain Nic96 PF04097.14 NODE_23798_length_870_cov_189.718563_g18490_i0reverse_frame_1 - 6.3e-21 74.5 0.0 7.7e-21 74.2 0.0 1.1 1 0 0 1 1 1 1 Nup93/Nic96 PPR PF01535.20 NODE_23798_length_870_cov_189.718563_g18490_i0reverse_frame_1 - 0.039 14.2 0.0 0.85 10.0 0.0 2.9 3 0 0 3 3 3 0 PPR repeat TPR_2 PF07719.17 NODE_23798_length_870_cov_189.718563_g18490_i0reverse_frame_1 - 0.05 13.7 0.0 1.2 9.5 0.1 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_23798_length_870_cov_189.718563_g18490_i0reverse_frame_1 - 0.7 10.9 3.9 19 6.4 0.1 3.5 3 1 0 3 3 3 0 Tetratricopeptide repeat Ank_2 PF12796.7 NODE_23780_length_871_cov_13.590909_g18477_i0forward_frame_3 - 6.2e-14 52.3 1.7 9.5e-08 32.5 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 NODE_23780_length_871_cov_13.590909_g18477_i0forward_frame_3 - 1.3e-06 28.3 0.1 0.03 14.8 0.0 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 NODE_23780_length_871_cov_13.590909_g18477_i0forward_frame_3 - 2.2e-06 28.1 0.0 5.1e-06 26.9 0.0 1.7 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 NODE_23780_length_871_cov_13.590909_g18477_i0forward_frame_3 - 2.9e-05 24.2 0.0 0.0031 17.8 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_23780_length_871_cov_13.590909_g18477_i0forward_frame_3 - 0.00014 22.1 0.1 0.09 13.3 0.1 2.8 2 0 0 2 2 2 2 Ankyrin repeat DUF4899 PF16240.5 NODE_23780_length_871_cov_13.590909_g18477_i0forward_frame_2 - 0.048 12.8 0.0 0.072 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4899) DUF5644 PF18712.1 NODE_23777_length_871_cov_76.138756_g18474_i0forward_frame_3 - 0.18 11.8 2.1 1.5 8.9 0.1 2.8 2 1 1 3 3 3 0 Family of unknown function (DUF5644) DUF2968 PF11180.8 NODE_23734_length_872_cov_109.568698_g18436_i0reverse_frame_2 - 0.085 12.5 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) LpxI_N PF17930.1 ORF97811 - 0.074 13.0 0.0 0.19 11.6 0.0 1.6 2 0 0 2 2 2 0 LpxI N-terminal domain RCC1 PF00415.18 ORF97092 - 1.1e-52 176.4 5.5 4.1e-10 40.1 0.1 5.2 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF97092 - 6e-37 124.7 20.5 1.6e-10 40.5 0.3 6.2 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat PP-binding PF00550.25 ORF96549 - 9.7e-09 35.5 0.1 1.6e-08 34.8 0.1 1.3 1 0 0 1 1 1 1 Phosphopantetheine attachment site SpoVS PF04232.12 ORF95879 - 1.2e-07 31.3 0.0 9.9e-05 22.0 0.0 2.3 2 0 0 2 2 2 2 Stage V sporulation protein S (SpoVS) VIR_N PF15912.5 ORF95701 - 0.15 11.7 2.1 0.22 11.1 2.1 1.2 1 0 0 1 1 1 0 Virilizer, N-terminal GntR PF00392.21 ORF89471 - 9e-19 66.9 0.1 1.4e-18 66.3 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 ORF89471 - 1.4e-05 24.8 0.0 2.8e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 ORF89471 - 1.6e-05 24.8 0.0 3.4e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 ORF89471 - 0.0041 17.0 0.2 0.0095 15.8 0.2 1.6 1 0 0 1 1 1 1 MarR family HTH_29 PF13551.6 ORF89471 - 0.067 13.2 0.1 0.13 12.3 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn helix HTH_36 PF13730.6 ORF89471 - 0.068 13.1 0.1 0.29 11.1 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain MarR PF01047.22 ORF89471 - 0.092 12.7 0.0 0.28 11.1 0.0 1.8 1 0 0 1 1 1 0 MarR family RP-C PF03428.13 ORF89471 - 0.11 12.2 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_41 PF14502.6 ORF89471 - 0.13 12.0 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain IL23 PF16649.5 ORF87376 - 0.062 13.3 0.1 0.11 12.6 0.1 1.4 1 0 0 1 1 1 0 Interleukin 23 subunit alpha 3HBOH PF10605.9 ORF87376 - 0.15 10.3 1.9 0.19 10.0 1.9 1.2 1 0 0 1 1 1 0 3HB-oligomer hydrolase (3HBOH) SHIPPO-rpt PF07004.12 ORF78871 - 2.1e-07 31.5 33.7 0.03 15.2 2.4 7.0 7 0 0 7 7 7 5 Sperm-tail PG-rich repeat Glyco_hydro_31 PF01055.26 ORF76043 - 9e-59 199.8 0.1 1.2e-58 199.3 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF76043 - 2.4e-07 30.9 0.0 4.4e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Acetyltransf_8 PF13523.6 ORF76043 - 0.057 13.1 0.7 0.21 11.3 0.4 2.0 3 0 0 3 3 3 0 Acetyltransferase (GNAT) domain TRAM_LAG1_CLN8 PF03798.16 ORF74225 - 1.4e-18 67.3 27.6 1.8e-18 67.0 27.6 1.1 1 0 0 1 1 1 1 TLC domain TRAPP PF04051.16 ORF74225 - 0.033 13.9 0.0 0.053 13.2 0.0 1.3 1 0 0 1 1 1 0 Transport protein particle (TRAPP) component 3Beta_HSD PF01073.19 ORF70441 - 1.3e-15 57.2 0.0 1.6e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF70441 - 4.8e-11 42.6 0.0 1.1e-10 41.4 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF70441 - 7.3e-05 22.1 0.0 9.8e-05 21.6 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF70441 - 7.7e-05 22.0 0.2 0.00055 19.2 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF70441 - 0.0008 19.3 0.0 0.0017 18.3 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding hNIFK_binding PF12196.8 ORF70073 - 0.066 12.7 0.3 0.15 11.6 0.3 1.5 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK PH_TFIIH PF08567.11 ORF70073 - 0.16 12.3 1.6 0.29 11.5 0.2 2.0 2 0 0 2 2 2 0 TFIIH p62 subunit, N-terminal domain DUF2400 PF09674.10 ORF692 - 4.2 7.3 5.9 14 5.6 1.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) Presenilin PF01080.17 ORF68443 - 1.2 7.9 7.6 1.5 7.5 7.6 1.2 1 0 0 1 1 1 0 Presenilin ORC_WH_C PF18137.1 ORF68443 - 4.4 7.4 14.0 51 3.9 14.0 2.2 1 1 0 1 1 1 0 Origin recognition complex winged helix C-terminal NAD_kinase PF01513.21 ORF56588 - 3.6e-15 55.9 0.0 4.2e-15 55.7 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 ORF56588 - 0.024 14.3 0.0 0.041 13.5 0.0 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain DUF2967 PF11179.8 ORF56284 - 0.13 10.3 0.0 0.17 10.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2967) Viral_DNA_Zn_bi PF03728.13 ORF56166 - 0.08 13.5 1.4 0.15 12.7 0.2 2.0 2 0 0 2 2 2 0 Viral DNA-binding protein, zinc binding domain DUF2606 PF10794.9 ORF47524 - 0.093 12.5 0.5 0.24 11.1 0.5 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2606) PilJ PF13675.6 ORF46707 - 2.7e-05 24.2 0.0 2.6 8.1 0.0 3.8 4 0 0 4 4 4 3 Type IV pili methyl-accepting chemotaxis transducer N-term Abhydrolase_1 PF00561.20 ORF46298 - 1.3e-15 57.8 0.0 4.6e-14 52.7 0.0 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF46298 - 1.3e-06 27.9 0.0 0.00013 21.3 0.0 2.2 2 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 ORF46298 - 0.00048 20.2 0.0 0.00088 19.4 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Mem_trans PF03547.18 ORF45658 - 0.02 13.3 0.4 0.023 13.1 0.4 1.1 1 0 0 1 1 1 0 Membrane transport protein MFS_1 PF07690.16 ORF44812 - 2.6e-14 52.9 40.1 8e-09 34.9 25.5 2.8 1 1 1 2 2 2 2 Major Facilitator Superfamily TMEM43 PF07787.12 ORF44649 - 7.2e-19 68.2 0.0 1.2e-18 67.5 0.0 1.3 1 1 0 1 1 1 1 Transmembrane protein 43 HCO3_cotransp PF00955.21 ORF44590 - 6e-64 216.7 0.1 6.9e-64 216.5 0.1 1.0 1 0 0 1 1 1 1 HCO3- transporter family Helicase_C PF00271.31 ORF38731 - 7e-08 32.8 0.0 1.1e-07 32.2 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain AsmA PF05170.14 ORF38052 - 3.6e-11 42.6 0.4 9e-11 41.3 0.4 1.6 1 1 0 1 1 1 1 AsmA family AsmA_2 PF13502.6 ORF38052 - 4.1e-05 23.2 1.0 0.0022 17.6 0.2 2.3 2 0 0 2 2 2 2 AsmA-like C-terminal region HATPase_c PF02518.26 ORF31176 - 3.7e-09 37.1 0.0 6.6e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCDHK_Adom3 PF10436.9 ORF31176 - 2.3e-05 24.3 0.2 3.7e-05 23.6 0.2 1.3 1 0 0 1 1 1 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase HATPase_c_3 PF13589.6 ORF31176 - 0.15 11.9 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1415 PF07209.12 ORF27474 - 1.3e-22 80.3 0.0 1.2e-16 61.0 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1415) zf-RING_2 PF13639.6 ORF27435 - 5.2e-10 39.5 7.4 5.2e-10 39.5 7.4 2.3 2 0 0 2 2 2 1 Ring finger domain HEAT PF02985.22 ORF27435 - 1.6e-07 31.0 2.7 0.0017 18.4 0.0 2.9 2 0 0 2 2 2 2 HEAT repeat zf-RING_UBOX PF13445.6 ORF27435 - 1.9e-06 27.8 2.8 1.9e-06 27.8 2.8 2.8 2 1 1 3 3 3 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF27435 - 1.1e-05 25.2 5.6 3.1e-05 23.8 5.6 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF27435 - 5e-05 23.5 7.0 5e-05 23.5 7.0 2.3 2 1 0 2 2 2 1 RING-H2 zinc finger domain HEAT_2 PF13646.6 ORF27435 - 0.0001 22.6 9.9 0.0062 16.9 2.7 2.3 1 1 1 2 2 2 2 HEAT repeats zf-RING_11 PF17123.5 ORF27435 - 0.00019 21.1 1.7 0.00019 21.1 1.7 2.2 2 0 0 2 2 1 1 RING-like zinc finger Prok-RING_4 PF14447.6 ORF27435 - 0.0003 20.6 4.3 0.0015 18.3 4.5 2.2 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF27435 - 0.00038 20.3 5.6 0.0013 18.7 5.6 2.0 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF27435 - 0.0009 18.8 3.9 0.0025 17.4 3.9 1.8 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type HEAT_EZ PF13513.6 ORF27435 - 0.001 19.5 10.7 0.0055 17.2 2.4 2.7 2 0 0 2 2 2 1 HEAT-like repeat zf-C3HC4_3 PF13920.6 ORF27435 - 0.0059 16.5 6.7 0.03 14.2 6.7 2.2 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Vac14_Fab1_bd PF12755.7 ORF27435 - 0.011 16.3 0.0 0.14 12.8 0.0 2.2 1 1 0 1 1 1 0 Vacuolar 14 Fab1-binding region zf-ANAPC11 PF12861.7 ORF27435 - 0.012 15.7 2.3 0.012 15.7 2.3 1.9 2 1 0 2 2 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 ORF27435 - 0.014 15.3 9.4 0.11 12.4 9.4 2.5 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Nitr_red_bet_C PF14711.6 ORF27435 - 0.032 13.9 0.3 0.061 13.0 0.3 1.4 1 0 0 1 1 1 0 Respiratory nitrate reductase beta C-terminal zf-RING_10 PF16685.5 ORF27435 - 0.047 13.8 3.4 0.17 12.0 3.4 1.9 1 1 0 1 1 1 0 zinc RING finger of MSL2 HrpB1_HrpK PF09613.10 ORF27435 - 0.053 13.2 2.7 0.18 11.4 2.7 1.9 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB1_HrpK) Baculo_IE-1 PF05290.11 ORF27435 - 0.073 13.0 0.5 0.14 12.2 0.5 1.4 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) UPF0547 PF10571.9 ORF27435 - 0.14 12.3 3.3 7.5 6.7 0.2 3.0 3 0 0 3 3 2 0 Uncharacterised protein family UPF0547 FANCL_C PF11793.8 ORF27435 - 0.33 11.2 6.1 1.2 9.3 6.1 2.0 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3HC4_4 PF15227.6 ORF27435 - 0.5 10.6 6.5 1.5 9.0 6.5 1.9 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3H2C3 PF17122.5 ORF27435 - 2.8 8.1 8.1 5.1 7.2 1.3 2.7 2 1 0 2 2 2 0 Zinc-finger Cation_ATPase_C PF00689.21 ORF26694 - 2.2e-47 161.1 0.1 2.9e-47 160.7 0.1 1.2 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus OppC_N PF12911.7 ORF26694 - 0.85 9.6 5.4 2.4 8.2 0.1 2.8 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C UPF0242 PF06785.11 ORF24362 - 0.0027 17.8 0.2 0.024 14.7 0.1 2.1 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus tRNA_anti-like PF12869.7 ORF24362 - 0.025 14.2 0.0 0.1 12.2 0.0 2.1 2 1 0 2 2 2 0 tRNA_anti-like TMEM52 PF14979.6 ORF24362 - 0.034 14.1 2.0 0.037 13.9 0.1 2.0 2 0 0 2 2 2 0 Transmembrane 52 CRA PF06589.11 ORF24362 - 0.066 13.3 11.5 1.2 9.2 0.0 2.8 2 1 0 2 2 2 0 Circumsporozoite-related antigen (CRA) DUF3413 PF11893.8 ORF18855 - 0.088 12.0 0.2 0.088 12.0 0.2 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3413) Sigma70_r2 PF04542.14 ORF18855 - 0.13 12.0 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 region 2 Ank_2 PF12796.7 ORF150992 - 2.2e-18 66.6 0.0 4.9e-09 36.7 0.0 2.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF150992 - 3.2e-13 49.6 1.7 0.00064 20.0 0.0 3.6 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF150992 - 1.8e-12 47.5 0.2 0.00022 21.7 0.0 3.6 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF150992 - 8e-11 41.9 2.0 0.0023 18.3 0.0 5.4 6 0 0 6 6 6 2 Ankyrin repeat Ank_3 PF13606.6 ORF150992 - 1.6e-09 37.2 0.1 0.13 12.9 0.0 4.7 4 1 0 4 4 4 2 Ankyrin repeat DnaJ PF00226.31 ORF150992 - 0.00019 21.5 0.1 0.0004 20.4 0.1 1.5 1 0 0 1 1 1 1 DnaJ domain 3Beta_HSD PF01073.19 ORF150199 - 1.2e-15 57.2 0.0 1.6e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF150199 - 4.9e-11 42.6 0.0 1.1e-10 41.4 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF150199 - 7.3e-05 22.1 0.0 9.8e-05 21.6 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF150199 - 7.7e-05 22.0 0.2 0.00055 19.2 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF150199 - 0.00079 19.4 0.0 0.0017 18.3 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding TRAM_LAG1_CLN8 PF03798.16 ORF150169 - 1.4e-18 67.3 27.6 1.8e-18 67.0 27.6 1.1 1 0 0 1 1 1 1 TLC domain TRAPP PF04051.16 ORF150169 - 0.033 13.9 0.0 0.053 13.2 0.0 1.3 1 0 0 1 1 1 0 Transport protein particle (TRAPP) component T6SS_Vgr PF13296.6 ORF148111 - 0.089 12.9 0.3 0.16 12.2 0.3 1.3 1 0 0 1 1 1 0 Putative type VI secretion system Rhs element Vgr LpxI_N PF17930.1 ORF147714 - 0.074 13.0 0.0 0.19 11.6 0.0 1.6 2 0 0 2 2 2 0 LpxI N-terminal domain DUF3021 PF11457.8 ORF146708 - 0.018 15.4 6.9 0.032 14.6 6.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF2776 PF10951.8 ORF146708 - 0.054 12.7 4.6 0.077 12.2 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) EOS1 PF12326.8 ORF146708 - 0.15 11.9 0.8 0.31 11.0 0.6 1.7 1 1 0 1 1 1 0 N-glycosylation protein TMEM208_SND2 PF05620.11 ORF146708 - 0.25 11.1 4.7 0.56 10.0 4.7 1.7 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 HA2 PF04408.23 ORF146708 - 0.36 11.1 2.5 0.39 11.0 0.6 1.9 1 1 1 2 2 2 0 Helicase associated domain (HA2) DUF3086 PF11285.8 ORF146708 - 0.44 9.6 4.6 0.46 9.5 2.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3086) AAA_31 PF13614.6 ORF146395 - 0.026 14.5 0.1 0.045 13.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain TGFb_propeptide PF00688.18 ORF146395 - 0.12 12.1 0.1 0.88 9.3 0.1 2.1 1 1 1 2 2 2 0 TGF-beta propeptide SHIPPO-rpt PF07004.12 ORF144946 - 6.1 8.0 8.7 0.38 11.8 1.5 2.7 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat 3Beta_HSD PF01073.19 ORF143286 - 1.2e-15 57.2 0.0 1.6e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF143286 - 4.9e-11 42.6 0.0 1.1e-10 41.4 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF143286 - 7.3e-05 22.1 0.0 9.8e-05 21.6 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF143286 - 7.7e-05 22.0 0.2 0.00055 19.2 0.2 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF143286 - 0.00079 19.4 0.0 0.0017 18.3 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding DUF3099 PF11298.8 ORF142776 - 4.8 7.4 5.8 5.3 7.2 0.9 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3099) Nuc_sug_transp PF04142.15 ORF139452 - 2.9e-17 62.8 9.2 3.6e-17 62.5 9.2 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter Vps35 PF03635.17 ORF139452 - 0.064 11.7 0.2 0.086 11.3 0.2 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 35 EamA PF00892.20 ORF139452 - 0.53 10.5 18.0 0.19 11.9 4.6 2.1 2 0 0 2 2 2 0 EamA-like transporter family WWE PF02825.20 ORF13533 - 0.00018 22.1 0.0 0.00036 21.1 0.0 1.5 1 0 0 1 1 1 1 WWE domain DnaJ PF00226.31 ORF13533 - 0.012 15.7 0.0 0.035 14.3 0.0 1.8 1 0 0 1 1 1 0 DnaJ domain Asp PF00026.23 ORF135101 - 1.8e-05 24.3 0.4 2.7e-05 23.7 0.4 1.3 1 1 0 1 1 1 1 Eukaryotic aspartyl protease Pex24p PF06398.11 ORF135101 - 0.13 11.3 0.1 0.29 10.1 0.0 1.5 2 0 0 2 2 2 0 Integral peroxisomal membrane peroxin TRP PF06011.12 ORF131961 - 0.094 11.4 4.5 0.15 10.7 4.5 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF4083 PF13314.6 ORF131961 - 5.4 7.0 6.4 1.6 8.8 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4083) Viral_DNA_Zn_bi PF03728.13 ORF129376 - 0.08 13.5 1.4 0.15 12.7 0.2 2.0 2 0 0 2 2 2 0 Viral DNA-binding protein, zinc binding domain Pkinase PF00069.25 ORF129084 - 2.1e-57 194.5 0.0 2.5e-57 194.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF129084 - 3.4e-28 98.6 0.0 4.5e-28 98.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF129084 - 0.00023 20.6 0.0 0.00035 20.0 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_C PF00433.24 ORF129084 - 0.09 13.5 1.4 0.28 11.9 1.8 1.6 2 0 0 2 2 2 0 Protein kinase C terminal domain DSHCT PF08148.12 ORF128133 - 0.00033 20.4 3.6 7.7 6.2 0.2 4.6 1 1 3 4 4 4 3 DSHCT (NUC185) domain HXXEE PF13787.6 ORF128133 - 0.00046 21.0 4.2 13 6.6 0.1 4.4 5 0 0 5 5 5 3 Protein of unknown function with HXXEE motif Cyclin_C PF02984.19 ORF128133 - 0.0022 18.1 7.2 1.5 9.0 0.2 3.7 1 1 2 4 4 4 2 Cyclin, C-terminal domain Integrase_H2C2 PF17921.1 ORF128133 - 0.08 13.1 0.2 1e+02 3.1 0.0 4.3 5 0 0 5 5 5 0 Integrase zinc binding domain NdhN PF11909.8 ORF128133 - 0.14 11.9 0.2 19 4.9 0.0 2.2 2 0 0 2 2 2 0 NADH-quinone oxidoreductase cyanobacterial subunit N Tom6 PF17112.5 ORF128133 - 4.7 6.8 17.4 29 4.3 0.1 5.7 7 0 0 7 7 7 0 Mitochondrial import receptor subunit Tom6, fungal DUF1831 PF08866.10 ORF127503 - 0.00099 19.5 0.0 0.0025 18.2 0.0 1.7 1 1 0 1 1 1 1 Putative amino acid metabolism DHHC PF01529.20 ORF12611 - 1.7e-34 118.8 12.5 1.7e-34 118.8 12.5 2.1 2 0 0 2 2 2 2 DHHC palmitoyltransferase FtsL PF04999.13 ORF12611 - 0.22 11.5 0.2 0.55 10.3 0.2 1.7 1 0 0 1 1 1 0 Cell division protein FtsL Borrelia_REV PF03978.13 ORF121740 - 0.0015 18.5 0.1 0.0015 18.5 0.1 1.7 2 0 0 2 2 2 1 Borrelia burgdorferi REV protein Nrap_D2 PF17403.2 ORF121740 - 0.011 15.5 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 0 Nrap protein PAP/OAS-like domain FRB_dom PF08771.11 ORF113092 - 0.82 10.1 6.3 0.18 12.2 1.3 2.3 2 1 0 2 2 2 0 FKBP12-rapamycin binding domain AA_kinase PF00696.28 ORF109030 - 2.2e-32 112.6 0.2 2.7e-32 112.3 0.2 1.1 1 0 0 1 1 1 1 Amino acid kinase family Leader_Thr PF08254.11 ORF109030 - 6.5e-08 32.1 17.5 1.3e-07 31.2 17.5 1.5 1 0 0 1 1 1 1 Threonine leader peptide DUF2608 PF11019.8 ORF108215 - 0.0047 16.5 0.0 0.24 10.8 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2608) Acid_PPase PF12689.7 ORF108215 - 0.016 15.1 0.0 0.47 10.3 0.0 2.1 2 0 0 2 2 2 0 Acid Phosphatase GRASP55_65 PF04495.14 ORF105710 - 2.8e-30 105.5 0.1 5.6e-30 104.5 0.0 1.6 2 0 0 2 2 2 1 GRASP55/65 PDZ-like domain LRR_8 PF13855.6 ORF105710 - 0.034 13.9 0.2 0.065 13.0 0.2 1.4 1 0 0 1 1 1 0 Leucine rich repeat YlqD PF11068.8 ORF105710 - 6.5 7.1 16.2 3 8.2 13.5 1.8 3 0 0 3 3 3 0 YlqD protein AidB_N PF18158.1 NODE_23988_length_865_cov_177.725301_g18488_i1forward_frame_1 - 0.045 13.7 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain IncF PF17626.2 NODE_23988_length_865_cov_177.725301_g18488_i1forward_frame_1 - 0.06 13.7 0.4 0.14 12.5 0.4 1.7 1 0 0 1 1 1 0 Inclusion membrane protein F hNIFK_binding PF12196.8 NODE_23934_length_866_cov_5185.910951_g18607_i0reverse_frame_1 - 0.0049 16.3 0.1 4.2 6.9 0.0 2.4 2 0 0 2 2 2 2 FHA Ki67 binding domain of hNIFK DUF397 PF04149.12 NODE_23934_length_866_cov_5185.910951_g18607_i0reverse_frame_1 - 0.052 13.6 0.0 16 5.6 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF397) DUF3039 PF11238.8 NODE_23934_length_866_cov_5185.910951_g18607_i0reverse_frame_1 - 0.055 13.2 0.2 16 5.4 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) Chloroa_b-bind PF00504.21 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 1.4e-59 201.2 3.0 5.8e-35 121.2 0.1 3.0 3 0 0 3 3 3 3 Chlorophyll A-B binding protein BtrH_N PF14399.6 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.0013 19.0 0.0 5 7.4 0.0 3.2 4 0 0 4 4 4 2 Butirosin biosynthesis protein H, N-terminal Atu4866 PF11512.8 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.0033 17.8 0.0 4.2 7.8 0.0 2.5 2 0 0 2 2 2 2 Agrobacterium tumefaciens protein Atu4866 Yopt PF09467.10 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.006 16.6 0.0 5.8 7.0 0.0 2.3 2 0 0 2 2 2 2 Hypothetical protein Yopt LAGLIDADG_3 PF14528.6 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.075 13.4 0.0 19 5.7 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Glyco_hydro_32C PF08244.12 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.082 12.9 0.0 6.8 6.7 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolases family 32 C terminal TRP_2 PF08344.11 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_1 - 0.17 12.1 0.0 33 4.8 0.0 2.3 2 0 0 2 2 2 0 Transient receptor ion channel II Ycf70 PF17382.2 NODE_23887_length_868_cov_75.384154_g18564_i0forward_frame_2 - 4.1 7.9 10.7 2.8 8.4 2.7 2.7 1 1 1 2 2 2 0 Uncharacterized Ycf70-like SKN1 PF03935.15 NODE_23886_length_868_cov_83.286915_g18563_i0reverse_frame_3 - 0.0084 14.6 2.1 0.011 14.2 0.5 1.7 2 0 0 2 2 2 1 Beta-glucan synthesis-associated protein (SKN1) UCH PF00443.29 NODE_23835_length_869_cov_135.346523_g18520_i0reverse_frame_3 - 4.5e-36 124.7 3.7 5.2e-36 124.5 3.7 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 NODE_23835_length_869_cov_135.346523_g18520_i0reverse_frame_3 - 3.2e-13 50.0 1.9 3.9e-13 49.7 1.9 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Rep_Org_C PF06926.11 NODE_23835_length_869_cov_135.346523_g18520_i0reverse_frame_3 - 0.0034 17.6 5.5 0.16 12.3 0.1 3.7 2 1 2 4 4 4 1 Putative replisome organiser protein C-terminus AidB_N PF18158.1 NODE_23795_length_870_cov_218.323353_g18488_i0reverse_frame_3 - 0.045 13.7 0.0 0.07 13.1 0.0 1.3 1 0 0 1 1 1 0 Adaptive response protein AidB N-terminal domain IncF PF17626.2 NODE_23795_length_870_cov_218.323353_g18488_i0reverse_frame_3 - 0.062 13.7 0.4 0.14 12.5 0.4 1.6 1 0 0 1 1 1 0 Inclusion membrane protein F C1_2 PF03107.16 NODE_23795_length_870_cov_218.323353_g18488_i0forward_frame_2 - 4.9e-07 30.0 3.2 1e-06 29.0 3.2 1.5 1 0 0 1 1 1 1 C1 domain DUF3464 PF11947.8 NODE_23795_length_870_cov_218.323353_g18488_i0forward_frame_2 - 0.0068 16.2 0.5 0.0068 16.2 0.5 4.3 2 1 1 3 3 3 1 Photosynthesis affected mutant 68 ArfGap PF01412.18 ORF95602 - 2.7e-25 88.7 0.2 5.1e-25 87.8 0.2 1.5 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf DUF4088 PF13317.6 ORF95602 - 0.1 12.1 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4088) Zip PF02535.22 ORF89490 - 5.4e-32 111.3 13.5 6.1e-26 91.4 2.2 2.6 1 1 1 2 2 2 2 ZIP Zinc transporter SLATT_1 PF18181.1 ORF89490 - 0.25 11.3 0.5 12 5.8 0.0 2.9 2 2 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 PIG-Y PF15159.6 ORF89490 - 0.42 11.6 3.1 0.88 10.5 0.6 2.6 2 1 0 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF4199 PF13858.6 ORF86918 - 0.033 14.6 0.4 0.054 13.9 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) Lir1 PF07207.11 ORF86072 - 0.19 12.0 5.2 0.44 10.8 3.1 2.4 1 1 1 2 2 2 0 Light regulated protein Lir1 Hydrolase_3 PF08282.12 ORF84930 - 0.047 13.4 0.0 0.065 13.0 0.0 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF84930 - 0.073 13.4 0.0 0.096 13.0 0.0 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Lir1 PF07207.11 ORF80050 - 0.19 12.0 5.2 0.44 10.8 3.1 2.4 1 1 1 2 2 2 0 Light regulated protein Lir1 Ion_trans PF00520.31 ORF78184 - 6.9e-10 38.6 9.7 8.9e-10 38.2 9.7 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_6 PF13405.6 ORF78184 - 0.011 15.6 0.0 0.023 14.6 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain EF-hand_5 PF13202.6 ORF78184 - 0.073 12.6 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 EF hand BCIP PF13862.6 ORF78184 - 0.1 12.3 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 p21-C-terminal region-binding protein DUF3671 PF12420.8 ORF78184 - 0.82 9.8 4.6 3.6 7.7 4.6 2.1 1 1 0 1 1 1 0 Protein of unknown function Aldo_ket_red PF00248.21 ORF74109 - 1.8e-49 168.6 0.2 5.5e-49 166.9 0.2 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family Metallophos PF00149.28 ORF71275 - 7.8e-33 114.7 0.6 1e-32 114.3 0.6 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF3498 PF12004.8 ORF69304 - 0.13 11.4 1.8 0.18 11.0 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) CbiQ PF02361.16 ORF69304 - 0.37 10.4 8.5 0.55 9.8 8.5 1.3 1 0 0 1 1 1 0 Cobalt transport protein Glyco_transf_22 PF03901.17 ORF69304 - 0.41 9.8 4.0 0.51 9.5 4.0 1.1 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family Dicty_REP PF05086.12 ORF69304 - 0.65 7.9 5.4 0.83 7.6 5.4 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Stevor PF17410.2 ORF69304 - 5 6.6 5.2 6.8 6.1 5.2 1.1 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Pro_sub2 PF18513.1 ORF65975 - 0.037 14.2 0.6 0.037 14.2 0.6 2.7 3 0 0 3 3 3 0 Prodomain subtilisin 2 DUF4407 PF14362.6 ORF65975 - 0.072 12.4 23.4 0.1 12.0 22.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Col_cuticle_N PF01484.17 ORF65975 - 0.58 10.3 4.8 13 5.9 0.1 3.3 2 1 0 2 2 2 0 Nematode cuticle collagen N-terminal domain ApoO PF09769.9 ORF65975 - 1.8 8.5 5.1 2.6 8.0 0.9 2.7 1 1 1 2 2 2 0 Apolipoprotein O MORN PF02493.20 ORF64766 - 0.00094 18.9 0.0 0.00094 18.9 0.0 5.4 6 0 0 6 6 6 2 MORN repeat DnaJ PF00226.31 ORF63764 - 0.0083 16.2 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 DnaJ domain DUF349 PF03993.12 ORF63764 - 2.1 8.7 6.4 0.5 10.7 1.6 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF349) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks66.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks66.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks66.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks66.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:19 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Lir1 PF07207.11 ORF61934 - 0.19 12.0 5.2 0.44 10.8 3.1 2.4 1 1 1 2 2 2 0 Light regulated protein Lir1 Aldo_ket_red PF00248.21 ORF58297 - 9.7e-34 116.9 0.4 3.5e-32 111.8 0.4 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family DUF3860 PF12976.7 ORF56955 - 0.027 14.5 0.1 0.12 12.4 0.1 2.1 1 1 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3860) CSRNP_N PF16019.5 ORF56955 - 6.2 6.7 11.3 1.6 8.6 6.9 2.1 1 1 1 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus VEG PF06257.11 ORF56921 - 1.5 8.9 7.9 0.26 11.3 1.2 2.6 2 0 0 2 2 2 0 Biofilm formation stimulator VEG Dsh_C PF12316.8 ORF56921 - 2.2 8.6 10.4 3.6 7.9 10.4 1.4 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal FTR1 PF03239.14 ORF56921 - 3.8 6.6 3.7 20 4.2 0.6 2.3 2 0 0 2 2 2 0 Iron permease FTR1 family DUF87 PF01935.17 ORF56921 - 4.9 7.2 13.7 0.026 14.6 1.6 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain MT0933_antitox PF14013.6 ORF56921 - 6.9 7.1 24.6 7.7 6.9 2.0 3.4 2 1 0 2 2 2 0 MT0933-like antitoxin protein Lir1 PF07207.11 ORF55841 - 0.19 12.0 5.2 0.44 10.8 3.1 2.4 1 1 1 2 2 2 0 Light regulated protein Lir1 Mito_carr PF00153.27 ORF52811 - 2e-54 181.5 3.7 1.1e-22 79.8 0.0 3.0 2 1 1 3 3 3 3 Mitochondrial carrier protein DNA_pol_A_exo1 PF01612.20 ORF52323 - 6.3e-21 74.9 1.7 8.8e-21 74.4 1.7 1.1 1 0 0 1 1 1 1 3'-5' exonuclease zf-C2H2 PF00096.26 ORF49972 - 4.3e-08 33.2 25.7 0.0091 16.4 3.5 3.5 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF49972 - 5.5e-07 29.7 9.7 0.00016 22.0 6.1 2.6 2 0 0 2 2 2 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF49972 - 0.016 16.0 24.1 0.046 14.6 2.4 3.5 3 0 0 3 3 3 0 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF49972 - 0.049 13.9 13.6 0.37 11.1 5.3 2.7 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding CpXC PF14353.6 ORF49972 - 0.052 13.6 3.2 0.13 12.3 2.9 1.8 1 1 0 1 1 1 0 CpXC protein zf-C2H2_8 PF15909.5 ORF49972 - 0.96 9.8 13.0 1.7 9.0 8.0 2.3 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-BED PF02892.15 ORF49972 - 6.1 7.0 11.5 5.1 7.2 6.9 2.3 1 1 1 2 2 2 0 BED zinc finger TPR_1 PF00515.28 ORF44248 - 2.4e-12 46.1 7.4 5.7e-06 25.9 0.0 5.3 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF44248 - 7.3e-09 35.8 6.3 2.4e-05 24.5 0.0 4.1 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF44248 - 3.7e-08 32.9 17.3 0.00017 21.4 0.2 5.5 5 1 2 7 7 7 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF44248 - 7.4e-08 32.0 3.1 0.014 15.1 0.1 4.5 4 0 0 4 4 4 2 TPR repeat TPR_16 PF13432.6 ORF44248 - 1.9e-07 31.6 10.5 0.00074 20.1 0.0 4.4 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF44248 - 0.0002 21.3 6.7 0.6 10.5 0.0 5.3 6 0 0 6 6 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF44248 - 0.00039 20.2 6.4 0.86 9.8 0.2 4.9 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF44248 - 0.0004 20.2 11.0 0.081 12.8 0.0 5.5 6 1 0 6 6 6 2 Tetratricopeptide repeat DUF3856 PF12968.7 ORF44248 - 0.0056 16.8 1.0 0.095 12.8 0.0 2.9 3 1 0 3 3 3 1 Domain of Unknown Function (DUF3856) TPR_19 PF14559.6 ORF44248 - 0.0063 17.0 7.6 0.1 13.1 0.0 3.9 3 1 0 4 4 3 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 ORF44248 - 0.007 15.8 2.5 0.96 9.0 0.1 3.2 3 0 0 3 3 3 1 SHNi-TPR TPR_17 PF13431.6 ORF44248 - 0.015 15.6 0.4 10 6.8 0.0 3.1 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF44248 - 0.029 15.0 9.9 24 5.8 0.1 6.0 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF44248 - 0.091 13.6 14.2 3.6 8.6 0.0 5.7 3 2 2 6 6 6 0 Tetratricopeptide repeat SNAP PF14938.6 ORF44248 - 2.9 7.2 7.0 2.6 7.4 0.1 2.8 2 1 0 2 2 2 0 Soluble NSF attachment protein, SNAP DUF2066 PF09839.9 ORF43988 - 0.22 10.9 0.0 0.31 10.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2066) DHHC PF01529.20 ORF43520 - 0.16 12.1 11.6 1.6 8.8 1.2 2.2 2 0 0 2 2 2 0 DHHC palmitoyltransferase CYSTM PF12734.7 ORF43520 - 0.38 11.1 0.1 0.38 11.1 0.1 2.9 2 1 0 2 2 2 0 Cysteine-rich TM module stress tolerance FAM75 PF14650.6 ORF43520 - 0.84 9.1 12.5 1.2 8.6 12.5 1.1 1 0 0 1 1 1 0 FAM75 family Phage_holin_3_6 PF07332.11 ORF43520 - 1.5 8.9 3.4 1.4 9.0 0.2 2.3 2 1 1 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III DENN PF02141.21 ORF38994 - 5.3e-22 78.7 0.9 7.5e-22 78.2 0.9 1.2 1 0 0 1 1 1 1 DENN (AEX-3) domain dDENN PF03455.19 ORF38994 - 0.00057 19.8 0.7 0.0017 18.3 0.1 2.0 2 0 0 2 2 2 1 dDENN domain Drf_GBD PF06371.13 ORF38994 - 0.013 15.1 0.0 0.018 14.6 0.0 1.3 1 0 0 1 1 1 0 Diaphanous GTPase-binding Domain MMPL PF03176.15 ORF31979 - 0.0031 16.5 15.1 0.0031 16.5 15.1 1.4 1 1 0 1 1 1 1 MMPL family Patched PF02460.18 ORF31979 - 0.019 13.1 19.5 0.025 12.7 19.5 1.1 1 0 0 1 1 1 0 Patched family MFS_1 PF07690.16 ORF24935 - 5.4e-13 48.6 24.6 3.5e-10 39.3 11.9 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF2583 PF10762.9 ORF24935 - 0.93 9.9 6.4 0.2 12.1 0.4 2.7 3 1 0 3 3 3 0 Protein of unknown function (DUF2583) NAD1 PF18778.1 ORF24198 - 0.011 15.9 0.0 0.017 15.2 0.0 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 SNAD4 PF18750.1 ORF24198 - 0.017 15.2 0.1 0.032 14.4 0.1 1.4 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC2 PF18772.1 ORF24198 - 0.14 12.2 0.1 0.22 11.5 0.1 1.3 1 0 0 1 1 1 0 APOBEC2 HeLo PF14479.6 ORF23161 - 0.05 13.4 0.1 0.091 12.6 0.1 1.5 1 1 0 1 1 1 0 Prion-inhibition and propagation DUF3860 PF12976.7 ORF22629 - 0.027 14.5 0.1 0.12 12.4 0.1 2.1 1 1 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3860) CSRNP_N PF16019.5 ORF22629 - 6.2 6.7 11.3 1.6 8.6 6.9 2.1 1 1 1 2 2 2 0 Cysteine/serine-rich nuclear protein N-terminus Aldo_ket_red PF00248.21 ORF18216 - 7.5e-49 166.5 0.1 2.2e-48 164.9 0.1 1.6 1 1 0 1 1 1 1 Aldo/keto reductase family HTH_6 PF01418.17 ORF16700 - 2.3e-33 114.0 0.2 6.9e-33 112.5 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain, rpiR family SIS PF01380.22 ORF16700 - 3.9e-28 97.9 1.1 5.5e-28 97.4 0.2 1.7 2 0 0 2 2 2 1 SIS domain SIS_2 PF13580.6 ORF16700 - 1.6e-11 44.3 1.5 4.1e-07 30.1 0.1 2.6 1 1 1 2 2 2 2 SIS domain GyrI-like PF06445.15 ORF152950 - 6.8e-22 78.4 0.0 8.8e-22 78.1 0.0 1.1 1 0 0 1 1 1 1 GyrI-like small molecule binding domain HTH_18 PF12833.7 ORF152950 - 1.4e-19 70.1 2.4 2.2e-19 69.5 2.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_AraC PF00165.23 ORF152950 - 1.1e-13 50.9 0.1 4.3e-07 29.9 0.2 2.5 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cass2 PF14526.6 ORF152950 - 3.2e-07 30.6 0.0 5.3e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Integron-associated effector binding protein Lir1 PF07207.11 ORF152389 - 0.19 12.0 5.2 0.44 10.8 3.1 2.4 1 1 1 2 2 2 0 Light regulated protein Lir1 WD40 PF00400.32 ORF149293 - 2.7e-08 34.3 0.2 0.032 15.1 0.0 3.6 3 1 0 3 3 3 2 WD domain, G-beta repeat DUF1513 PF07433.11 ORF149293 - 0.0094 15.1 0.0 0.035 13.2 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1513) PD40 PF07676.12 ORF149293 - 0.14 12.1 0.0 4 7.5 0.1 2.5 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat MORN PF02493.20 ORF148649 - 4.6e-06 26.2 21.7 0.0012 18.6 0.0 5.5 5 0 0 5 5 5 3 MORN repeat Ribosomal_S6 PF01250.17 ORF148649 - 0.13 12.5 2.2 0.6 10.4 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein S6 Lir1 PF07207.11 ORF147387 - 0.19 12.0 5.2 0.44 10.8 3.1 2.4 1 1 1 2 2 2 0 Light regulated protein Lir1 HEAT PF02985.22 ORF143335 - 4e-09 36.0 0.6 0.00012 22.0 0.0 2.9 2 0 0 2 2 2 2 HEAT repeat zf-RING_2 PF13639.6 ORF143335 - 1.4e-06 28.5 16.7 3.9e-06 27.1 16.7 1.8 1 0 0 1 1 1 1 Ring finger domain HEAT_2 PF13646.6 ORF143335 - 3.3e-06 27.4 4.4 0.0065 16.8 0.4 2.3 1 1 1 2 2 2 2 HEAT repeats zf-RING_UBOX PF13445.6 ORF143335 - 6e-06 26.2 14.3 1.3e-05 25.1 14.3 1.6 1 0 0 1 1 1 1 RING-type zinc-finger HEAT_EZ PF13513.6 ORF143335 - 1.8e-05 25.2 4.1 0.0038 17.7 0.3 2.9 2 0 0 2 2 2 2 HEAT-like repeat zf-ANAPC11 PF12861.7 ORF143335 - 4.8e-05 23.3 7.9 0.00012 22.1 7.9 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 ORF143335 - 7.3e-05 22.6 13.9 0.00018 21.3 13.9 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Arm PF00514.23 ORF143335 - 0.00037 20.4 1.3 0.11 12.6 0.0 2.9 3 0 0 3 3 3 1 Armadillo/beta-catenin-like repeat zf-rbx1 PF12678.7 ORF143335 - 0.00078 19.7 19.0 0.0023 18.1 19.0 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF143335 - 0.0022 17.9 13.0 0.0054 16.7 13.0 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF143335 - 0.0045 16.7 8.1 0.037 13.8 8.1 2.4 1 1 0 1 1 1 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF143335 - 0.023 14.5 11.7 0.061 13.2 11.7 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Cnd1 PF12717.7 ORF143335 - 0.025 14.6 0.0 1.7 8.6 0.0 2.1 2 0 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 zf-C3HC4_4 PF15227.6 ORF143335 - 0.071 13.3 9.6 0.23 11.6 9.6 1.9 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Vac14_Fab1_bd PF12755.7 ORF143335 - 0.17 12.5 0.0 3 8.5 0.0 2.2 1 1 0 1 1 1 0 Vacuolar 14 Fab1-binding region zf-C3HC4_2 PF13923.6 ORF143335 - 1.5 8.7 21.3 44 4.0 21.3 3.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF143335 - 3.6 7.3 15.1 16 5.3 15.1 2.1 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zinc-ribbons_6 PF07191.12 ORF143335 - 7 6.7 10.8 1.8 8.6 2.8 2.6 1 1 1 2 2 2 0 zinc-ribbons MORN PF02493.20 ORF141832 - 0.00094 18.9 0.0 0.00094 18.9 0.0 5.4 6 0 0 6 6 6 2 MORN repeat Ribosomal_S6 PF01250.17 ORF141832 - 0.11 12.7 2.6 0.45 10.8 0.2 2.3 2 0 0 2 2 2 0 Ribosomal protein S6 DUF5101 PF17031.5 ORF141832 - 0.23 11.6 2.2 0.28 11.3 0.5 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF5101) GAS2 PF02187.17 ORF140834 - 1.9e-07 31.1 0.0 3.7e-07 30.1 0.0 1.5 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain DUF4200 PF13863.6 ORF140834 - 8.2e-06 26.2 9.1 1.8e-05 25.1 9.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) FerA PF08165.11 ORF140834 - 0.012 15.5 5.3 0.22 11.5 4.0 2.9 2 1 1 3 3 3 0 FerA (NUC095) domain DUF885 PF05960.11 ORF140834 - 0.019 14.6 1.6 0.025 14.3 1.6 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) DUF3802 PF12290.8 ORF140834 - 0.034 14.7 1.3 0.052 14.1 0.2 1.9 2 0 0 2 2 1 0 Protein of unknown function (DUF3802) SlyX PF04102.12 ORF140834 - 0.034 14.7 17.2 0.81 10.4 8.5 2.7 2 1 0 2 2 2 0 SlyX Spc7 PF08317.11 ORF140834 - 0.14 11.0 16.1 0.22 10.4 16.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 ORF140834 - 0.17 11.4 9.4 0.32 10.5 9.4 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4407 PF14362.6 ORF140834 - 0.22 10.8 7.8 0.35 10.2 7.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF724 PF05266.14 ORF140834 - 0.25 11.2 15.6 2.8 7.7 8.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) GAS PF13851.6 ORF140834 - 0.8 9.0 22.1 2.6 7.4 21.4 1.9 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Bacillus_HBL PF05791.11 ORF140834 - 1 9.2 11.2 1.6 8.5 11.2 1.4 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) CENP-H PF05837.12 ORF140834 - 2 8.9 15.9 3.2 8.2 13.1 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) ABC_tran_CTD PF16326.5 ORF140834 - 2.3 8.6 22.0 3.4 8.0 9.7 3.3 2 1 2 4 4 3 0 ABC transporter C-terminal domain IFT20 PF14931.6 ORF140834 - 3.4 7.8 17.5 2.3 8.4 2.5 2.2 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 Cluap1 PF10234.9 ORF140834 - 3.9 6.8 14.2 5.6 6.3 14.2 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 DUF3987 PF13148.6 ORF140834 - 4.1 6.3 7.9 5.6 5.9 7.3 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3987) Mod_r PF07200.13 ORF140834 - 4.4 7.4 17.2 31 4.6 17.5 2.2 2 1 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Rsd_AlgQ PF04353.13 ORF140834 - 4.5 7.2 11.9 0.11 12.5 2.5 2.2 1 1 1 2 2 2 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ UPF0242 PF06785.11 ORF140834 - 7.9 6.5 22.7 15 5.6 22.7 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF3862 PF12978.7 ORF129053 - 0.0082 16.0 0.3 0.024 14.5 0.1 1.9 2 0 0 2 2 2 1 Domain of Unknown Function with PDB structure (DUF3862) HsbA PF12296.8 ORF129053 - 0.048 14.1 0.1 0.18 12.2 0.0 2.0 2 0 0 2 2 2 0 Hydrophobic surface binding protein A Sbi-IV PF11621.8 ORF129053 - 0.56 10.6 3.7 1.4 9.3 0.2 2.9 3 0 0 3 3 3 0 C3 binding domain 4 of IgG-bind protein SBI Lir1 PF07207.11 ORF128681 - 0.19 12.0 5.2 0.44 10.8 3.1 2.4 1 1 1 2 2 2 0 Light regulated protein Lir1 MtN3_slv PF03083.16 ORF126284 - 2e-21 75.8 12.7 2.7e-14 52.9 4.0 2.2 2 0 0 2 2 2 2 Sugar efflux transporter for intercellular exchange Metallophos PF00149.28 ORF126232 - 8.5e-34 117.8 0.1 1.2e-33 117.4 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Lir1 PF07207.11 ORF124576 - 0.19 12.0 5.2 0.44 10.8 3.1 2.4 1 1 1 2 2 2 0 Light regulated protein Lir1 2-Hacid_dh_C PF02826.19 ORF122035 - 4e-50 169.6 0.0 5.7e-50 169.1 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 ORF122035 - 0.0069 16.6 0.0 0.013 15.7 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2OG-FeII_Oxy PF03171.20 ORF12191 - 1.1e-07 32.2 0.0 1.8e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily zf-C6H2 PF15801.5 ORF120436 - 0.012 15.9 0.3 0.026 14.8 0.3 1.5 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding Mtf2_C PF14061.6 ORF117522 - 0.18 12.0 0.0 0.4 10.9 0.0 1.6 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 Lir1 PF07207.11 ORF114473 - 0.19 12.0 5.2 0.44 10.8 3.1 2.4 1 1 1 2 2 2 0 Light regulated protein Lir1 Flt3_lig PF02947.14 ORF108633 - 0.02 15.0 0.7 0.045 13.9 0.7 1.6 1 0 0 1 1 1 0 flt3 ligand Fur_reg_FbpB PF13040.6 ORF108633 - 0.08 12.5 1.9 0.53 9.9 0.1 2.6 2 0 0 2 2 2 0 Fur-regulated basic protein B Peptidase_M20 PF01546.28 ORF107831 - 3.2e-16 59.6 0.0 3.9e-16 59.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 ORF107831 - 1.6e-12 47.3 0.1 2.7e-12 46.6 0.1 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Laps PF10169.9 ORF107831 - 0.096 13.3 0.0 0.16 12.5 0.0 1.3 1 0 0 1 1 1 0 Learning-associated protein SRAP PF02586.14 ORF106654 - 1.6e-43 148.8 0.0 2.4e-43 148.3 0.0 1.2 1 0 0 1 1 1 1 SOS response associated peptidase (SRAP) PP2C PF00481.21 ORF101891 - 3.1e-55 187.6 0.0 3.6e-55 187.4 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF101891 - 0.0052 16.7 0.0 0.73 9.7 0.0 2.1 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) DUF3095 PF11294.8 ORF101891 - 0.057 12.5 0.1 0.18 10.9 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3095) VATC PF18716.1 NODE_24105_length_862_cov_58.345828_g17543_i1forward_frame_1 - 0.035 13.9 4.1 0.05 13.5 2.5 2.2 1 1 0 1 1 1 0 Vms1-associating treble clef domain ALMT PF11744.8 NODE_24001_length_865_cov_69.332530_g18660_i0reverse_frame_3 - 5.4 5.7 24.0 8.3 5.1 24.0 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter Sporozoite_P67 PF05642.11 NODE_24001_length_865_cov_69.332530_g18660_i0forward_frame_2 - 0.045 11.9 4.1 0.055 11.6 4.1 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen C1_2 PF03107.16 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 4.6e-07 30.1 3.2 9.9e-07 29.0 3.2 1.5 1 0 0 1 1 1 1 C1 domain DUF3464 PF11947.8 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 0.0068 16.2 0.5 0.0068 16.2 0.5 3.4 2 1 0 2 2 2 1 Photosynthesis affected mutant 68 AAA_11 PF13086.6 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 0.58 9.9 10.6 0.14 12.0 4.6 2.1 2 0 0 2 2 2 0 AAA domain GREB1 PF15782.5 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 1.4 6.0 7.4 1.8 5.6 7.4 1.2 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer SpoIIP PF07454.11 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 4.1 6.8 16.4 1.5 8.2 8.0 2.4 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) CDC45 PF02724.14 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 5.6 5.1 20.3 0.79 7.9 11.6 2.1 2 0 0 2 2 2 0 CDC45-like protein Ndc1_Nup PF09531.10 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 6.5 5.3 17.1 9.3 4.8 17.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup NPR3 PF03666.13 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 8.3 5.1 23.7 1.6 7.4 15.3 2.2 2 0 0 2 2 2 0 Nitrogen Permease regulator of amino acid transport activity 3 Connexin PF00029.19 NODE_23988_length_865_cov_177.725301_g18488_i1reverse_frame_2 - 9.9 5.8 15.9 1.1 9.0 5.7 2.5 2 0 0 2 2 2 0 Connexin Molydop_binding PF01568.21 NODE_23982_length_865_cov_300.708434_g18643_i0reverse_frame_3 - 0.036 14.1 0.0 0.058 13.4 0.0 1.3 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain Homeodomain PF00046.29 NODE_23982_length_865_cov_300.708434_g18643_i0reverse_frame_2 - 2.9e-08 33.5 2.0 5.4e-08 32.6 2.0 1.5 1 0 0 1 1 1 1 Homeodomain TAP_C PF03943.13 NODE_23982_length_865_cov_300.708434_g18643_i0reverse_frame_2 - 0.13 11.9 1.6 2.4 7.8 0.1 2.6 2 0 0 2 2 2 0 TAP C-terminal domain zinc_ribbon_16 PF17034.5 NODE_23982_length_865_cov_300.708434_g18643_i0reverse_frame_2 - 0.24 11.6 3.7 0.2 11.9 0.3 2.2 1 1 1 2 2 2 0 Zinc-ribbon like family zf-BED PF02892.15 NODE_23982_length_865_cov_300.708434_g18643_i0forward_frame_3 - 0.0046 16.9 1.1 0.0046 16.9 1.1 3.1 3 0 0 3 3 3 1 BED zinc finger Dzip-like_N PF13815.6 NODE_23966_length_866_cov_1.718412_g18635_i0forward_frame_3 - 1.6 8.7 6.5 2.6 8.0 0.4 2.7 1 1 1 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal zf-A20 PF01754.16 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_3 - 0.005 16.8 0.5 5 7.2 0.1 2.8 2 0 0 2 2 2 2 A20-like zinc finger DUF3703 PF12487.8 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_3 - 0.0072 16.1 0.0 5.1 7.0 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF3703) Acyl-CoA_dh_2 PF08028.11 NODE_23934_length_866_cov_5185.910951_g18607_i0forward_frame_3 - 0.22 11.8 1.7 20 5.4 0.1 2.3 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain EF-hand_7 PF13499.6 NODE_23922_length_867_cov_92.754808_g18595_i0reverse_frame_3 - 0.0036 17.7 0.0 2.8 8.4 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 NODE_23922_length_867_cov_92.754808_g18595_i0reverse_frame_3 - 0.0076 15.7 0.1 0.76 9.5 0.0 2.6 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 NODE_23922_length_867_cov_92.754808_g18595_i0reverse_frame_3 - 0.092 12.6 0.0 3.6 7.5 0.0 2.9 3 0 0 3 3 3 0 EF-hand domain pair EF-hand_6 PF13405.6 NODE_23922_length_867_cov_92.754808_g18595_i0reverse_frame_3 - 0.17 11.9 0.1 2 8.5 0.0 2.6 3 0 0 3 3 3 0 EF-hand domain DUF2567 PF10821.8 NODE_23922_length_867_cov_92.754808_g18595_i0forward_frame_2 - 0.19 11.8 0.1 0.33 11.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2567) Pkinase PF00069.25 ORF99416 - 3.3e-52 177.5 0.0 3.8e-52 177.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF99416 - 1.4e-16 60.6 0.0 1.8e-16 60.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF99416 - 0.00029 20.3 0.0 0.00045 19.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF99416 - 0.0037 17.2 0.0 0.0057 16.6 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF99416 - 0.053 12.9 0.0 0.07 12.5 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF99416 - 0.057 13.0 0.0 0.083 12.5 0.0 1.3 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Annexin_like PF18411.1 ORF99416 - 0.06 13.6 0.4 0.13 12.5 0.2 1.6 2 0 0 2 2 2 0 Annexin-like domain Choline_kinase PF01633.20 ORF99416 - 0.11 12.1 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase HU-CCDC81_euk_1 PF14908.6 ORF9870 - 8.4e-23 80.3 0.1 2.2e-22 79.0 0.0 1.8 2 0 0 2 2 2 1 CCDC81 eukaryotic HU domain 1 HU-CCDC81_euk_2 PF18289.1 ORF9870 - 3.2e-15 56.0 0.0 7.5e-14 51.6 0.0 2.2 2 0 0 2 2 2 1 CCDC81 eukaryotic HU domain 2 Bac_DNA_binding PF00216.21 ORF9870 - 0.00087 19.5 0.4 0.017 15.3 0.0 2.7 3 0 0 3 3 3 1 Bacterial DNA-binding protein HU-HIG PF18291.1 ORF9870 - 0.084 13.0 0.5 0.43 10.7 0.0 2.4 3 0 0 3 3 3 0 HU domain fused to wHTH, Ig, or Glycine-rich motif Zip PF02535.22 ORF96136 - 1.5e-11 44.2 7.0 3e-11 43.1 7.0 1.5 1 1 0 1 1 1 1 ZIP Zinc transporter LRR_6 PF13516.6 ORF88190 - 4 7.7 7.3 28 5.1 0.1 4.1 4 0 0 4 4 4 0 Leucine Rich repeat RNA_pol PF00940.19 ORF83184 - 0.056 12.3 0.5 0.083 11.7 0.5 1.2 1 0 0 1 1 1 0 DNA-dependent RNA polymerase TFIIA PF03153.13 ORF83184 - 0.17 11.9 15.0 0.21 11.6 15.0 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF702 PF05142.12 ORF83184 - 0.22 12.0 4.9 0.07 13.6 1.9 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF702) SF-assemblin PF06705.11 ORF83184 - 0.98 8.7 4.6 0.38 10.1 0.8 2.0 2 0 0 2 2 2 0 SF-assemblin/beta giardin Ndc1_Nup PF09531.10 ORF83184 - 1.5 7.4 5.1 1.5 7.4 5.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup GREB1 PF15782.5 ORF83184 - 2.6 5.1 8.4 3 4.9 8.4 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Apolipoprotein PF01442.18 ORF83184 - 4.3 7.2 17.7 27 4.6 17.7 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Rrn6 PF10214.9 ORF83184 - 9.7 4.5 15.7 11 4.4 15.7 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor EF-hand_6 PF13405.6 ORF79658 - 1.2e-07 31.1 0.4 1.4e-06 27.8 0.2 2.5 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF79658 - 3.4e-07 29.3 1.1 9.7e-07 27.9 1.1 1.8 1 0 0 1 1 1 1 EF hand Ion_trans PF00520.31 ORF79658 - 1.5e-06 27.6 7.7 2.3e-06 27.1 7.7 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_8 PF13833.6 ORF79658 - 2.8e-06 27.1 0.2 6.6e-06 25.9 0.2 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF79658 - 2.3e-05 23.7 0.3 4.5e-05 22.7 0.3 1.5 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF79658 - 5.6e-05 23.5 0.6 0.00011 22.5 0.2 1.8 2 0 0 2 2 2 1 EF-hand domain pair Caleosin PF05042.13 ORF79658 - 0.046 13.6 0.1 0.15 12.0 0.1 1.8 1 1 0 1 1 1 0 Caleosin related protein Adenine_glyco PF03352.13 ORF79658 - 0.053 13.3 0.0 5.1 6.8 0.0 2.2 2 0 0 2 2 2 0 Methyladenine glycosylase CA_like PF10563.9 ORF79658 - 0.083 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative carbonic anhydrase SieB PF14163.6 ORF79658 - 0.11 12.0 0.0 0.11 12.0 0.0 1.6 2 0 0 2 2 2 0 Super-infection exclusion protein B Peptidase_M14 PF00246.24 ORF65541 - 7.3e-06 26.0 0.1 2.6e-05 24.2 0.1 1.9 1 1 0 1 1 1 1 Zinc carboxypeptidase CCDC144C PF14915.6 ORF65375 - 0.029 13.5 1.0 0.042 13.0 1.0 1.1 1 0 0 1 1 1 0 CCDC144C protein coiled-coil region Syntaxin-6_N PF09177.11 ORF65375 - 0.052 14.1 0.2 0.1 13.2 0.2 1.5 1 0 0 1 1 1 0 Syntaxin 6, N-terminal SeqA PF03925.13 ORF64876 - 1e-49 167.1 0.0 1.5e-49 166.6 0.0 1.2 1 0 0 1 1 1 1 SeqA protein C-terminal domain SeqA_N PF17206.3 ORF64876 - 8.6e-24 82.6 0.4 1.5e-23 81.8 0.4 1.4 1 0 0 1 1 1 1 SeqA protein N-terminal domain VAPB_antitox PF02697.14 ORF64876 - 0.031 15.0 0.1 0.093 13.5 0.1 1.8 1 1 0 1 1 1 0 Putative antitoxin Brix PF04427.18 ORF64834 - 8.2e-33 114.1 0.1 1.1e-32 113.7 0.1 1.2 1 0 0 1 1 1 1 Brix domain UPF0147 PF03685.13 ORF64834 - 0.036 14.1 1.5 0.055 13.5 0.8 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0147) Prok-RING_2 PF14445.6 ORF64080 - 9.6 6.5 14.9 31 4.8 11.5 2.7 2 0 0 2 2 2 0 Prokaryotic RING finger family 2 THF_DHG_CYH_C PF02882.19 ORF62276 - 7.2e-69 230.2 0.1 1.2e-68 229.5 0.1 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 ORF62276 - 8.7e-40 135.6 0.1 1.3e-39 135.0 0.1 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DUF4636 PF15468.6 ORF61837 - 0.018 14.7 0.1 0.027 14.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) ERGIC_N PF13850.6 ORF61837 - 0.072 13.4 0.1 0.17 12.3 0.1 1.6 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) AAA PF00004.29 ORF57058 - 2.9e-43 147.5 0.0 4.3e-43 146.9 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF57058 - 8.2e-11 41.5 0.3 1.6e-10 40.6 0.3 1.5 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 ORF57058 - 2.5e-08 34.5 0.0 1.2e-05 25.8 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 ORF57058 - 6.9e-07 29.3 0.1 1.3e-05 25.2 0.1 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF57058 - 1.3e-06 28.6 0.0 2.6e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 ORF57058 - 4.7e-06 26.4 0.0 1e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 ORF57058 - 5.7e-05 23.4 0.1 0.0075 16.6 0.0 2.5 2 1 1 3 3 2 1 AAA domain IstB_IS21 PF01695.17 ORF57058 - 0.00018 21.3 0.0 0.00034 20.4 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein Sigma54_activat PF00158.26 ORF57058 - 0.00029 20.6 0.1 0.0011 18.7 0.1 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain RNA_helicase PF00910.22 ORF57058 - 0.001 19.4 0.0 0.0022 18.3 0.0 1.6 1 0 0 1 1 1 1 RNA helicase TIP49 PF06068.13 ORF57058 - 0.0011 18.3 0.0 0.0017 17.7 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain DUF815 PF05673.13 ORF57058 - 0.0015 17.7 0.0 0.0021 17.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_7 PF12775.7 ORF57058 - 0.0017 17.9 0.0 0.0041 16.7 0.0 1.7 1 1 0 1 1 1 1 P-loop containing dynein motor region Mg_chelatase PF01078.21 ORF57058 - 0.0025 17.2 0.0 0.0051 16.2 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 ORF57058 - 0.0027 17.7 0.0 0.0043 17.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain Parvo_NS1 PF01057.17 ORF57058 - 0.0048 16.0 0.0 0.0083 15.2 0.0 1.3 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 PhoH PF02562.16 ORF57058 - 0.0052 16.3 0.1 0.009 15.5 0.1 1.3 1 0 0 1 1 1 1 PhoH-like protein TsaE PF02367.17 ORF57058 - 0.0054 16.7 0.0 0.0092 16.0 0.0 1.3 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 ORF57058 - 0.0059 17.1 0.0 0.027 15.0 0.0 2.0 2 1 0 2 2 1 1 AAA domain AAA_24 PF13479.6 ORF57058 - 0.0091 15.7 0.1 0.019 14.7 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF57058 - 0.0096 16.1 0.0 0.017 15.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 ORF57058 - 0.011 15.3 0.1 0.026 14.1 0.1 1.6 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF57058 - 0.014 14.8 0.1 0.025 13.9 0.1 1.6 1 1 0 1 1 1 0 KaiC AAA_3 PF07726.11 ORF57058 - 0.019 14.8 0.0 0.033 14.1 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 ORF57058 - 0.019 15.2 0.0 0.032 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF57058 - 0.027 14.2 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF57058 - 0.029 13.7 0.0 0.056 12.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_11 PF13086.6 ORF57058 - 0.032 14.0 0.0 0.05 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 ORF57058 - 0.045 13.6 0.0 0.11 12.4 0.0 1.7 1 1 0 1 1 1 0 Bacterial dnaA protein Sigma54_activ_2 PF14532.6 ORF57058 - 0.045 13.9 0.0 0.088 12.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain NACHT PF05729.12 ORF57058 - 0.12 12.3 0.1 0.38 10.7 0.0 1.8 1 1 1 2 2 2 0 NACHT domain ABC_tran PF00005.27 ORF57058 - 0.15 12.5 0.0 0.4 11.2 0.0 1.8 1 1 0 1 1 1 0 ABC transporter Pkinase PF00069.25 ORF54624 - 2.1e-67 227.3 0.0 2.4e-67 227.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF54624 - 4.7e-34 117.8 0.0 5.6e-34 117.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF54624 - 2.3e-05 23.5 1.0 3.4e-05 23.0 1.0 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF54624 - 6.4e-05 22.4 0.1 0.00036 19.9 0.0 2.1 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 ORF54624 - 0.00041 19.8 0.7 0.00072 19.0 0.7 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family YukC PF10140.9 ORF54624 - 0.021 13.7 0.1 0.029 13.2 0.1 1.2 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC APH PF01636.23 ORF54624 - 0.031 14.2 0.1 0.43 10.5 0.0 2.2 1 1 1 2 2 2 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 ORF54624 - 0.037 12.8 0.0 0.092 11.5 0.0 1.6 2 0 0 2 2 2 0 Fungal protein kinase FeoB_N PF02421.18 ORF54624 - 0.18 11.3 0.2 2.6 7.6 0.2 2.0 1 1 1 2 2 2 0 Ferrous iron transport protein B Peptidase_M14 PF00246.24 ORF53968 - 7.3e-06 26.0 0.1 2.6e-05 24.2 0.1 1.9 1 1 0 1 1 1 1 Zinc carboxypeptidase Pkinase PF00069.25 ORF49266 - 2.4e-20 73.0 0.1 5.1e-20 72.0 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF49266 - 1.4e-06 27.8 0.0 1.9e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF49266 - 0.0037 16.6 0.0 0.0053 16.1 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Imm26 PF15428.6 ORF49266 - 0.33 11.2 3.5 0.43 10.8 0.2 2.5 3 0 0 3 3 3 0 Immunity protein 26 MMR_HSR1 PF01926.23 ORF48585 - 7.2e-14 51.8 0.0 1.9e-13 50.5 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 ORF48585 - 1.4e-05 25.2 0.0 0.14 12.2 0.0 2.8 2 1 1 3 3 3 2 Dynamin family RsgA_GTPase PF03193.16 ORF48585 - 4.3e-05 23.5 0.0 0.14 12.1 0.0 2.5 2 1 0 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 ORF48585 - 0.00055 19.5 0.0 0.0019 17.8 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B Hydrolase_4 PF12146.8 ORF48585 - 0.0027 17.0 0.0 0.0066 15.7 0.0 1.6 1 0 0 1 1 1 1 Serine aminopeptidase, S33 TniB PF05621.11 ORF48585 - 0.02 14.3 0.0 0.058 12.8 0.0 1.8 1 0 0 1 1 1 0 Bacterial TniB protein AAA_22 PF13401.6 ORF48585 - 0.047 14.0 0.0 0.17 12.1 0.0 2.1 1 1 0 1 1 1 0 AAA domain SRPRB PF09439.10 ORF48585 - 0.053 12.9 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit DUF3481 PF11980.8 ORF47321 - 0.054 13.2 0.2 0.23 11.2 0.0 2.0 2 0 0 2 2 2 0 C-terminal domain of neuropilin glycoprotein HAGH_C PF16123.5 ORF46048 - 3e-15 56.5 0.0 6.5e-15 55.4 0.0 1.6 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 ORF46048 - 1.7e-07 31.5 0.3 0.0064 16.5 0.2 2.8 2 1 0 2 2 2 2 Metallo-beta-lactamase superfamily Zn_ribbon_2 PF12674.7 ORF46048 - 0.025 15.3 2.4 0.025 15.3 2.4 2.7 3 1 0 3 3 3 0 Putative zinc ribbon domain Lactamase_B_2 PF12706.7 ORF46048 - 0.14 11.6 0.1 0.28 10.6 0.1 1.5 1 1 0 1 1 1 0 Beta-lactamase superfamily domain 3Beta_HSD PF01073.19 ORF45144 - 2.5e-11 43.1 0.2 3.1e-11 42.8 0.2 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF45144 - 1.1e-08 34.8 0.1 2e-08 34.0 0.1 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF45144 - 0.00068 18.9 0.1 0.00094 18.4 0.1 1.2 1 0 0 1 1 1 1 Male sterility protein GDP_Man_Dehyd PF16363.5 ORF45144 - 0.0016 17.9 0.1 0.0032 16.9 0.1 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 ORF45144 - 0.0034 16.6 0.2 0.0055 15.9 0.2 1.3 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_1 PF00175.21 ORF44373 - 3.7e-18 66.2 0.0 5.8e-18 65.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF44373 - 1.9e-09 37.8 0.0 3e-09 37.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain DUF1987 PF09345.10 ORF44373 - 0.00099 18.8 0.0 0.0019 17.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1987) NAD_binding_6 PF08030.12 ORF44373 - 0.17 12.0 0.0 0.77 9.9 0.0 1.9 1 1 1 2 2 2 0 Ferric reductase NAD binding domain Amino_oxidase PF01593.24 ORF43135 - 5.4e-06 26.0 0.0 0.00046 19.6 0.0 2.1 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase CRM1_repeat PF18777.1 ORF43135 - 0.093 12.3 1.1 0.19 11.2 1.1 1.4 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat Ank_2 PF12796.7 ORF40830 - 3.7e-10 40.2 0.1 1.8e-09 38.1 0.1 2.1 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Arm PF00514.23 ORF40830 - 1.5e-08 34.4 8.5 1.1e-05 25.3 0.2 4.8 5 0 0 5 5 5 2 Armadillo/beta-catenin-like repeat Ank_3 PF13606.6 ORF40830 - 2.8e-08 33.4 0.1 0.34 11.6 0.0 4.3 3 1 1 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF40830 - 1.8e-06 28.4 0.1 0.021 15.4 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF40830 - 0.00056 20.2 0.2 14 6.4 0.1 3.7 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 ORF40830 - 0.0049 17.2 0.6 0.54 10.7 0.2 3.4 2 1 1 3 3 3 1 Ankyrin repeats (many copies) LRR_4 PF12799.7 ORF37536 - 1.1e-08 35.1 2.7 0.00034 20.9 0.1 3.8 2 1 2 4 4 4 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF37536 - 1.4e-05 25.0 5.0 10 7.1 0.1 5.4 6 0 0 6 6 6 2 Leucine Rich Repeat LRR_6 PF13516.6 ORF37536 - 3.6e-05 23.5 3.8 0.73 10.0 0.0 4.8 5 0 0 5 5 5 2 Leucine Rich repeat LRR_8 PF13855.6 ORF37536 - 0.001 18.8 8.3 0.64 9.8 0.2 5.0 3 3 0 3 3 3 2 Leucine rich repeat PDZ_6 PF17820.1 ORF31925 - 0.0005 19.9 0.2 0.091 12.6 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF31925 - 0.0015 18.8 0.3 0.12 12.8 0.0 2.4 2 0 0 2 2 2 1 PDZ domain PhyH PF05721.13 ORF31925 - 0.012 15.9 0.0 0.066 13.5 0.0 2.1 2 0 0 2 2 2 0 Phytanoyl-CoA dioxygenase (PhyH) Fer4_12 PF13353.6 ORF31533 - 0.41 10.9 4.2 0.66 10.2 4.2 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain PCI PF01399.27 ORF3011 - 4.3e-11 43.3 0.7 9e-11 42.2 0.7 1.6 1 0 0 1 1 1 1 PCI domain RPN7 PF10602.9 ORF3011 - 7.9e-07 28.9 0.1 1.7e-06 27.8 0.0 1.6 2 1 0 2 2 2 1 26S proteasome subunit RPN7 DDRGK PF09756.9 ORF3011 - 0.0086 15.7 1.1 0.013 15.1 1.1 1.3 1 0 0 1 1 1 1 DDRGK domain Mito_carr PF00153.27 ORF234 - 1.3e-57 191.7 1.6 9.5e-21 73.5 0.1 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein PT-VENN PF04829.13 ORF234 - 0.025 14.6 2.8 1.5 8.9 0.1 2.3 2 0 0 2 2 2 0 Pre-toxin domain with VENN motif Cyt_c_ox_IV PF12270.8 ORF17159 - 0.1 12.7 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit IV rve PF00665.26 ORF150781 - 1.3e-30 106.1 0.0 3e-30 104.9 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF150781 - 2.7e-22 78.7 1.2 8.4e-21 73.9 0.3 2.5 2 0 0 2 2 2 1 Integrase core domain HTH_21 PF13276.6 ORF150781 - 5.1e-12 45.7 0.0 1.9e-11 43.9 0.0 2.0 2 0 0 2 2 2 1 HTH-like domain DDE_Tnp_IS240 PF13610.6 ORF150781 - 1e-09 38.8 0.0 1.8e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 DDE domain rve_3 PF13683.6 ORF150781 - 2.6e-09 36.7 0.0 5.3e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 Integrase core domain DDE_Tnp_ISAZ013 PF07592.11 ORF150781 - 0.14 11.2 0.0 0.25 10.3 0.0 1.4 1 0 0 1 1 1 0 Rhodopirellula transposase DDE domain Ammonium_transp PF00909.21 ORF145478 - 1.3e-37 129.5 7.9 1.5e-37 129.3 7.9 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family GARP PF16731.5 ORF140753 - 0.00017 21.4 0.6 0.00017 21.4 0.6 2.9 1 1 1 3 3 3 1 Glutamic acid/alanine-rich protein of Trypanosoma SHE3 PF17078.5 ORF140753 - 0.00062 19.5 7.8 0.00062 19.5 7.8 3.7 2 1 1 3 3 2 2 SWI5-dependent HO expression protein 3 YabA PF06156.13 ORF140753 - 0.0029 18.2 36.7 0.59 10.8 5.1 4.3 1 1 2 4 4 4 3 Initiation control protein YabA ADIP PF11559.8 ORF140753 - 0.0038 17.3 37.3 0.036 14.2 7.5 3.7 2 1 1 3 3 3 2 Afadin- and alpha -actinin-Binding APG6_N PF17675.1 ORF140753 - 0.01 16.4 46.1 1.2 9.7 13.9 3.2 1 1 0 2 2 2 2 Apg6 coiled-coil region DUF812 PF05667.11 ORF140753 - 0.015 14.2 36.2 0.037 12.9 14.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF812) FlaC_arch PF05377.11 ORF140753 - 0.035 14.5 2.9 0.035 14.5 2.9 5.4 3 2 1 5 5 5 0 Flagella accessory protein C (FlaC) Mod_r PF07200.13 ORF140753 - 0.036 14.2 37.7 0.3 11.2 11.6 4.0 2 1 2 4 4 4 0 Modifier of rudimentary (Mod(r)) protein GAS PF13851.6 ORF140753 - 0.046 13.1 41.4 0.16 11.3 1.4 3.5 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding MCC-bdg_PDZ PF10506.9 ORF140753 - 0.062 13.3 0.8 0.062 13.3 0.8 4.1 2 1 3 5 5 5 0 PDZ domain of MCC-2 bdg protein for Usher syndrome TPR_MLP1_2 PF07926.12 ORF140753 - 0.078 13.0 35.8 0.61 10.2 1.3 3.8 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein ZapB PF06005.12 ORF140753 - 0.11 13.0 41.1 0.38 11.2 5.0 4.5 2 1 2 4 4 4 0 Cell division protein ZapB YliH PF10799.8 ORF140753 - 0.16 11.9 0.1 0.16 11.9 0.1 2.8 2 1 1 3 3 3 0 Biofilm formation protein (YliH/bssR) DUF1664 PF07889.12 ORF140753 - 0.17 12.0 23.2 1.7 8.7 2.4 3.5 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) TolA_bind_tri PF16331.5 ORF140753 - 0.2 11.8 0.3 0.2 11.8 0.3 4.7 2 1 2 4 4 4 0 TolA binding protein trimerisation TACC_C PF05010.14 ORF140753 - 0.22 11.3 36.8 0.4 10.5 3.6 3.9 1 1 1 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HMMR_N PF15905.5 ORF140753 - 0.23 10.9 40.8 1.4 8.3 17.4 2.4 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal DUF4201 PF13870.6 ORF140753 - 0.47 10.2 42.5 0.43 10.3 11.0 4.1 1 1 3 4 4 4 0 Domain of unknown function (DUF4201) BLOC1_2 PF10046.9 ORF140753 - 0.55 10.6 30.2 4.4 7.7 4.0 5.2 2 2 2 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 WXG100 PF06013.12 ORF140753 - 0.65 10.3 6.6 4.6 7.6 0.1 4.0 4 1 0 4 4 4 0 Proteins of 100 residues with WXG DUF948 PF06103.11 ORF140753 - 0.89 9.9 10.0 4.2 7.7 0.5 3.9 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Rootletin PF15035.6 ORF140753 - 0.95 9.5 44.7 0.99 9.4 14.1 3.2 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion Filament PF00038.21 ORF140753 - 1.8 8.1 41.9 23 4.4 41.9 3.5 1 1 0 1 1 1 0 Intermediate filament protein Spc7 PF08317.11 ORF140753 - 2.2 7.1 41.3 0.021 13.7 18.3 3.1 1 1 2 3 3 3 0 Spc7 kinetochore protein DUF3450 PF11932.8 ORF140753 - 2.4 7.4 32.9 0.79 9.0 7.6 4.0 1 1 2 4 4 4 0 Protein of unknown function (DUF3450) HALZ PF02183.18 ORF140753 - 2.6 8.3 31.7 0.22 11.8 1.9 6.1 4 2 1 5 5 5 0 Homeobox associated leucine zipper FUSC PF04632.12 ORF140753 - 3.1 6.2 5.0 3 6.3 4.1 1.4 1 1 0 1 1 1 0 Fusaric acid resistance protein family Nup54_57_C PF18570.1 ORF140753 - 3.1 7.5 6.5 3.6 7.3 0.2 4.1 4 0 0 4 4 4 0 NUP57/Nup54 C-terminal domain CENP-F_leu_zip PF10473.9 ORF140753 - 3.3 7.7 48.7 5 7.1 7.2 4.1 1 1 3 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TSC22 PF01166.18 ORF140753 - 3.8 7.9 26.5 0.68 10.3 1.5 5.0 5 0 0 5 5 4 0 TSC-22/dip/bun family DUF4407 PF14362.6 ORF140753 - 5.5 6.2 18.6 1.7 7.9 11.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) KASH_CCD PF14662.6 ORF140753 - 7 6.4 44.0 0.19 11.5 3.3 3.4 1 1 2 3 3 3 0 Coiled-coil region of CCDC155 or KASH DUF4472 PF14739.6 ORF140753 - 7.4 7.4 35.5 3.6 8.3 3.6 3.9 1 1 2 4 4 4 0 Domain of unknown function (DUF4472) Golgin_A5 PF09787.9 ORF140753 - 7.6 5.9 41.2 9.7 5.6 20.1 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 ERM PF00769.19 ORF140753 - 9.5 5.9 42.4 3.7 7.3 3.1 3.0 1 1 2 3 3 3 0 Ezrin/radixin/moesin family Tropomyosin_1 PF12718.7 ORF140753 - 9.7 6.3 46.0 2.2 8.4 2.1 3.9 2 1 2 4 4 4 0 Tropomyosin like AAA_23 PF13476.6 ORF140697 - 0.58 10.6 18.7 0.29 11.6 16.5 1.6 2 0 0 2 2 2 0 AAA domain RNA_pol PF00940.19 ORF138782 - 0.056 12.3 0.5 0.083 11.7 0.5 1.2 1 0 0 1 1 1 0 DNA-dependent RNA polymerase TFIIA PF03153.13 ORF138782 - 0.17 11.9 15.0 0.21 11.6 15.0 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF702 PF05142.12 ORF138782 - 0.22 12.0 4.9 0.07 13.6 1.9 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF702) SF-assemblin PF06705.11 ORF138782 - 0.98 8.7 4.6 0.38 10.1 0.8 2.0 2 0 0 2 2 2 0 SF-assemblin/beta giardin Ndc1_Nup PF09531.10 ORF138782 - 1.5 7.4 5.1 1.5 7.4 5.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup GREB1 PF15782.5 ORF138782 - 2.6 5.1 8.4 3 4.9 8.4 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Apolipoprotein PF01442.18 ORF138782 - 4.3 7.2 17.7 27 4.6 17.7 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Rrn6 PF10214.9 ORF138782 - 9.7 4.5 15.7 11 4.4 15.7 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Pkinase PF00069.25 ORF135897 - 3.9e-05 23.1 0.0 5.2e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 ORF135897 - 0.041 13.8 0.0 0.091 12.7 0.0 1.6 2 0 0 2 2 2 0 Phosphotransferase enzyme family YpzG PF14139.6 ORF135897 - 0.078 13.2 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 YpzG-like protein Choline_kinase PF01633.20 ORF135897 - 0.15 11.6 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase ASF1_hist_chap PF04729.13 ORF134991 - 0.014 15.3 0.8 0.13 12.2 0.1 2.2 2 1 0 2 2 2 0 ASF1 like histone chaperone CN_hydrolase PF00795.22 ORF133635 - 3.3e-54 184.0 0.1 3.7e-54 183.8 0.1 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase YaeQ PF07152.12 ORF124767 - 4.2e-71 238.1 1.2 5.4e-71 237.7 1.2 1.1 1 0 0 1 1 1 1 YaeQ protein BRX PF08381.11 ORF124767 - 0.042 13.2 0.8 0.1 12.0 0.8 1.7 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 START PF01852.19 ORF12215 - 6.9e-10 38.7 0.0 1e-09 38.2 0.0 1.2 1 0 0 1 1 1 1 START domain TTL PF03133.15 ORF117231 - 3.4e-09 36.3 0.0 4.8e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF117231 - 0.00028 20.2 0.0 0.00052 19.3 0.0 1.4 2 0 0 2 2 2 1 YheC/D like ATP-grasp RNA_pol PF00940.19 ORF117039 - 0.056 12.3 0.5 0.083 11.7 0.5 1.2 1 0 0 1 1 1 0 DNA-dependent RNA polymerase TFIIA PF03153.13 ORF117039 - 0.17 11.9 15.0 0.21 11.6 15.0 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF702 PF05142.12 ORF117039 - 0.22 12.0 4.9 0.07 13.6 1.9 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF702) SF-assemblin PF06705.11 ORF117039 - 0.98 8.7 4.6 0.38 10.1 0.8 2.0 2 0 0 2 2 2 0 SF-assemblin/beta giardin Ndc1_Nup PF09531.10 ORF117039 - 1.5 7.4 5.1 1.5 7.4 5.1 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup GREB1 PF15782.5 ORF117039 - 2.6 5.1 8.4 3 4.9 8.4 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Apolipoprotein PF01442.18 ORF117039 - 4.3 7.2 17.7 27 4.6 17.7 2.0 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Rrn6 PF10214.9 ORF117039 - 9.7 4.5 15.7 11 4.4 15.7 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor Palm_thioest PF02089.15 ORF116541 - 6.1e-51 173.6 0.0 7e-51 173.4 0.0 1.0 1 0 0 1 1 1 1 Palmitoyl protein thioesterase DUF676 PF05057.14 ORF116541 - 0.07 12.6 0.0 0.15 11.5 0.0 1.4 1 1 0 1 1 1 0 Putative serine esterase (DUF676) Sclerostin PF05463.11 ORF116541 - 0.091 12.5 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 Sclerostin (SOST) Nuc_sug_transp PF04142.15 ORF116349 - 1.5e-11 44.0 0.8 1.5e-11 44.0 0.8 1.4 1 1 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF116349 - 8.2e-05 22.8 28.2 0.034 14.3 13.9 2.8 2 1 0 2 2 2 2 EamA-like transporter family SLC35F PF06027.12 ORF116349 - 0.0016 18.0 12.9 0.014 14.9 12.9 1.9 1 1 0 1 1 1 1 Solute carrier family 35 Ank_2 PF12796.7 ORF114373 - 2.3e-53 178.7 7.8 4.9e-16 59.1 0.0 4.1 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank PF00023.30 ORF114373 - 1.9e-35 119.7 9.8 9e-06 25.9 0.0 8.2 8 0 0 8 8 8 7 Ankyrin repeat Ank_4 PF13637.6 ORF114373 - 2.4e-35 120.4 4.5 5.7e-09 36.3 0.2 5.8 3 2 3 6 6 6 6 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF114373 - 4.6e-35 119.2 14.3 4.7e-09 36.3 0.0 7.2 2 2 5 7 7 7 7 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF114373 - 2.9e-34 113.2 1.1 4.1e-05 23.6 0.0 8.9 9 0 0 9 9 9 7 Ankyrin repeat QWRF PF04484.12 ORF11322 - 0.87 9.3 5.1 1.4 8.6 5.1 1.2 1 0 0 1 1 1 0 QWRF family Nmad2 PF18753.1 ORF109564 - 0.0055 16.2 1.4 0.009 15.5 1.4 1.5 1 0 0 1 1 1 1 Nucleotide modification associated domain 2 Neprosin_AP PF14365.6 ORF109564 - 0.073 13.6 0.2 0.16 12.4 0.2 1.5 1 0 0 1 1 1 0 Neprosin activation peptide Zip PF02535.22 ORF108992 - 1.7e-30 106.4 17.1 3.2e-25 89.1 4.7 2.8 1 1 2 3 3 3 3 ZIP Zinc transporter E1-E2_ATPase PF00122.20 ORF108992 - 0.89 9.0 3.2 3.8 7.0 0.7 2.5 1 1 1 2 2 2 0 E1-E2 ATPase Rab5ip PF07019.12 ORF108992 - 1.6 9.4 6.9 36 5.0 1.9 3.5 3 1 0 3 3 3 0 Rab5-interacting protein (Rab5ip) ATP-synt_I PF03899.15 ORF108992 - 6.4 7.2 10.8 8.3 6.8 2.1 2.7 2 1 0 2 2 2 0 ATP synthase I chain HemY_N PF07219.13 NODE_24183_length_860_cov_3.196364_g18812_i0reverse_frame_1 - 0.82 9.9 3.5 2.1 8.6 1.0 2.5 2 0 0 2 2 2 0 HemY protein N-terminus Flu_M2 PF00599.17 NODE_24183_length_860_cov_3.196364_g18812_i0reverse_frame_1 - 2.9 8.0 6.4 1.7 8.8 1.1 2.4 2 0 0 2 2 2 0 Influenza Matrix protein (M2) Vif PF00559.17 NODE_24183_length_860_cov_3.196364_g18812_i0forward_frame_1 - 0.021 14.5 0.5 0.043 13.5 0.2 1.7 2 1 0 2 2 2 0 Retroviral Vif (Viral infectivity) protein Pox_E10 PF04805.12 NODE_24183_length_860_cov_3.196364_g18812_i0forward_frame_1 - 0.17 11.8 4.6 0.13 12.1 0.7 2.3 2 0 0 2 2 2 0 E10-like protein conserved region ABC_tran PF00005.27 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 2.1e-36 125.4 0.0 3.7e-36 124.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 2.3e-05 23.9 1.4 0.00012 21.6 1.4 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DEAD PF00270.29 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 9.1e-05 22.3 0.0 0.00018 21.4 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.00032 21.0 0.3 0.0035 17.6 0.1 2.3 2 1 0 2 2 1 1 AAA domain ABC_membrane PF00664.23 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.0012 18.6 1.5 0.0017 18.0 1.5 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region Cytidylate_kin PF02224.18 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.0012 18.6 0.0 0.0018 18.0 0.0 1.3 1 0 0 1 1 1 1 Cytidylate kinase Zeta_toxin PF06414.12 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.0013 18.0 0.0 0.0026 17.1 0.0 1.4 1 1 0 1 1 1 1 Zeta toxin AAA_16 PF13191.6 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.0022 18.4 0.3 0.0044 17.4 0.3 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.0026 17.5 0.2 0.0082 15.9 0.2 1.9 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_24 PF13479.6 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.0036 17.0 0.0 0.0066 16.2 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.004 16.9 0.0 0.005 16.6 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.0056 17.2 0.2 0.016 15.7 0.2 1.7 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.17 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.006 16.7 0.0 0.011 15.8 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_25 PF13481.6 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.007 16.0 0.0 0.017 14.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.0071 16.3 0.0 0.011 15.6 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase APS_kinase PF01583.20 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.011 15.6 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase DUF2075 PF09848.9 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.011 15.0 0.0 0.017 14.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.012 15.4 0.1 0.028 14.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_21 PF13304.6 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.017 15.0 0.6 0.99 9.2 0.1 2.2 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system 6PF2K PF01591.18 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.034 13.4 0.0 0.076 12.3 0.0 1.5 1 1 1 2 2 2 0 6-phosphofructo-2-kinase NB-ARC PF00931.22 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.043 13.0 0.0 0.087 12.0 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain MMR_HSR1 PF01926.23 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.045 13.8 0.1 0.1 12.7 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_5 PF07728.14 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.091 12.8 0.0 0.26 11.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA PF00004.29 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.093 13.2 0.1 1.4 9.3 0.0 2.5 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.1 12.3 0.2 2.3 7.9 0.0 2.6 2 2 1 3 3 3 0 IstB-like ATP binding protein G-alpha PF00503.20 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.14 11.2 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit AAA_7 PF12775.7 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.15 11.5 0.1 0.4 10.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region Runt PF00853.19 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_1 - 0.24 11.0 0.8 8.1 6.0 0.0 2.3 1 1 1 2 2 2 0 Runt domain FAD_binding_4 PF01565.23 ORF99599 - 0.0031 17.3 0.6 0.0056 16.4 0.6 1.5 1 0 0 1 1 1 1 FAD binding domain Gly-zipper_Omp PF13488.6 ORF99599 - 0.084 12.9 20.4 0.14 12.2 20.4 1.2 1 0 0 1 1 1 0 Glycine zipper AAL_decarboxy PF03306.13 ORF99599 - 0.14 11.5 0.4 0.22 10.8 0.4 1.2 1 0 0 1 1 1 0 Alpha-acetolactate decarboxylase Cuticle_2 PF08184.11 ORF93888 - 0.0055 16.7 0.0 0.012 15.6 0.0 1.6 1 0 0 1 1 1 1 Cuticle protein 7 isoform family Na_H_antiporter PF03553.14 ORF9129 - 0.13 11.4 0.0 0.19 10.9 0.0 1.1 1 0 0 1 1 1 0 Na+/H+ antiporter family DUF4207 PF13904.6 ORF90480 - 5.3 6.7 30.3 8.9 5.9 30.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4207) ATP-synt PF00231.19 ORF8919 - 6.9e-97 324.5 0.0 7.6e-97 324.4 0.0 1.0 1 0 0 1 1 1 1 ATP synthase Methyltransf_16 PF10294.9 ORF84550 - 1e-11 44.9 0.5 1.8e-11 44.1 0.5 1.4 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_23 PF13489.6 ORF84550 - 5.6e-06 26.3 0.0 8.2e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 ORF84550 - 0.0011 18.4 0.4 0.0024 17.3 0.4 1.5 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 ORF84550 - 0.015 14.9 0.0 0.026 14.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_12 PF08242.12 ORF84550 - 0.039 14.7 0.1 0.084 13.6 0.1 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_20 PF12147.8 ORF84550 - 0.069 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_25 PF13649.6 ORF84550 - 0.071 13.8 0.1 0.18 12.5 0.1 1.9 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 ORF84550 - 0.13 12.1 0.7 0.23 11.3 0.7 1.5 1 1 0 1 1 1 0 Methyltransferase domain ABC_tran PF00005.27 ORF83946 - 1.3e-26 93.8 0.0 2.4e-26 92.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF83946 - 3.9e-08 33.0 3.1 3.9e-06 26.5 0.7 2.4 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF83946 - 0.0037 17.1 0.1 2.7 7.7 0.2 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF83946 - 0.047 13.8 0.0 0.11 12.6 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF83946 - 0.077 12.7 0.1 0.19 11.5 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain FtsK_SpoIIIE PF01580.18 ORF83946 - 0.12 11.7 0.1 0.24 10.7 0.1 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family 3Beta_HSD PF01073.19 ORF78243 - 2.7e-14 52.9 0.0 3.4e-14 52.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF78243 - 5.7e-12 45.6 0.2 1.7e-11 44.1 0.2 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF78243 - 8.4e-07 28.4 0.0 1.1e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF78243 - 3e-05 23.3 0.1 0.00073 18.8 0.1 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF78243 - 0.00027 20.9 0.0 0.00063 19.7 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF78243 - 0.0014 18.1 0.2 0.0021 17.5 0.2 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Phage_gp49_66 PF13876.6 ORF78243 - 0.047 14.0 0.2 0.5 10.7 0.1 2.3 1 1 1 2 2 2 0 Phage protein (N4 Gp49/phage Sf6 gene 66) family CAC1F_C PF16885.5 ORF75829 - 0.042 13.5 0.3 0.051 13.2 0.3 1.3 1 0 0 1 1 1 0 Voltage-gated calcium channel subunit alpha, C-term DUF4228 PF14009.6 ORF75829 - 0.78 10.1 3.2 1.1 9.6 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4228) DUF3381 PF11861.8 ORF67094 - 0.0017 18.2 2.9 0.0034 17.2 2.9 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3381) Herpes_UL17 PF04559.12 ORF67094 - 0.25 10.1 1.3 0.33 9.7 1.3 1.1 1 0 0 1 1 1 0 Herpesvirus UL17 protein SPATA3 PF15662.5 ORF67094 - 1 10.0 4.8 1.8 9.2 4.8 1.3 1 0 0 1 1 1 0 Spermatogenesis-associated protein 3 family 3Beta_HSD PF01073.19 ORF62626 - 2.6e-14 52.9 0.0 3.4e-14 52.5 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF62626 - 5.7e-12 45.6 0.2 1.7e-11 44.1 0.2 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF62626 - 8.6e-07 28.4 0.0 1.1e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF62626 - 3e-05 23.3 0.1 0.00073 18.8 0.1 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF62626 - 0.00027 20.9 0.0 0.00063 19.7 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF62626 - 0.0014 18.1 0.2 0.0021 17.5 0.2 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Phage_gp49_66 PF13876.6 ORF62626 - 0.044 14.1 0.4 0.5 10.7 0.1 2.5 2 1 1 3 3 3 0 Phage protein (N4 Gp49/phage Sf6 gene 66) family NARP1 PF12569.8 ORF62626 - 0.15 11.0 0.0 0.26 10.2 0.0 1.3 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Leuk-A4-hydro_C PF09127.11 ORF51003 - 1e-28 99.6 0.0 1.5e-28 99.1 0.0 1.3 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1 PF01433.20 ORF51003 - 1.4e-08 34.6 0.0 2e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M1 domain TLD PF07534.16 ORF49286 - 6.3e-24 84.8 1.2 1.1e-23 84.0 1.2 1.4 1 0 0 1 1 1 1 TLD Bestrophin PF01062.21 ORF4514 - 9.4e-08 31.8 0.1 1.4e-07 31.2 0.1 1.2 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Kelch_1 PF01344.25 ORF42019 - 6e-19 67.4 1.6 1.5e-05 24.5 0.0 4.3 4 0 0 4 4 4 4 Kelch motif Kelch_4 PF13418.6 ORF42019 - 1.7e-15 56.7 0.0 4e-06 26.7 0.0 4.6 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF42019 - 2.3e-11 43.4 0.6 0.0018 18.2 0.1 4.2 4 0 0 4 4 4 2 Kelch motif Kelch_2 PF07646.15 ORF42019 - 1.7e-08 34.1 2.2 0.012 15.6 0.1 4.3 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 ORF42019 - 2.4e-07 30.9 0.3 0.2 12.0 0.0 4.8 4 1 0 4 4 4 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF42019 - 2.5e-07 30.7 5.2 0.17 12.2 0.0 5.2 3 1 2 5 5 5 3 Kelch motif RE_MamI PF09567.10 ORF42019 - 0.048 13.3 0.9 0.07 12.8 0.8 1.4 1 1 0 1 1 1 0 MamI restriction endonuclease SIS_2 PF13580.6 ORF42019 - 0.07 13.1 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 SIS domain AMPK1_CBM PF16561.5 ORF41793 - 4.9e-27 94.0 0.5 8.1e-27 93.3 0.5 1.4 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase AMPKBI PF04739.15 ORF41793 - 1.3e-08 35.0 0.4 3.5e-08 33.6 0.4 1.7 1 0 0 1 1 1 1 5'-AMP-activated protein kinase beta subunit, interaction domain Alba PF01918.21 ORF33703 - 4e-11 42.6 0.1 7.4e-11 41.7 0.1 1.4 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 ORF33703 - 0.062 13.3 0.9 0.12 12.3 0.2 1.7 1 1 1 2 2 2 0 Rpp20 subunit of nuclear RNase MRP and P Rubis-subs-bind PF09273.11 ORF33367 - 1.9e-07 31.8 3.0 4e-07 30.8 3.0 1.6 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding SET PF00856.28 ORF33367 - 0.00013 22.4 0.0 0.0012 19.3 0.0 2.0 2 0 0 2 2 2 1 SET domain CARMIL_C PF16000.5 ORF33367 - 0.037 13.7 0.4 0.048 13.3 0.4 1.1 1 0 0 1 1 1 0 CARMIL C-terminus ER PF01133.17 ORF32301 - 0.39 10.8 2.9 0.5 10.4 1.0 1.9 1 1 1 2 2 2 0 Enhancer of rudimentary 3Beta_HSD PF01073.19 ORF32054 - 2.7e-14 52.9 0.0 3.4e-14 52.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF32054 - 5.7e-12 45.6 0.2 1.7e-11 44.1 0.2 1.7 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF32054 - 8.4e-07 28.4 0.0 1.1e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF32054 - 3e-05 23.3 0.1 0.00073 18.8 0.1 2.1 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF32054 - 0.00027 20.9 0.0 0.00063 19.7 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF32054 - 0.0014 18.1 0.2 0.0021 17.5 0.2 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Phage_gp49_66 PF13876.6 ORF32054 - 0.047 14.0 0.2 0.5 10.7 0.1 2.3 1 1 1 2 2 2 0 Phage protein (N4 Gp49/phage Sf6 gene 66) family Ank_2 PF12796.7 ORF27529 - 2.2e-05 24.9 0.1 3.9e-05 24.1 0.1 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF27529 - 4e-05 24.1 0.4 0.00012 22.5 0.2 1.9 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF27529 - 0.00036 20.7 1.0 0.35 11.6 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 ORF27529 - 0.004 17.4 0.1 0.012 15.9 0.1 1.9 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF27529 - 0.012 16.0 0.3 0.17 12.4 0.0 2.4 2 0 0 2 2 2 0 Ankyrin repeat Yip1 PF04893.17 ORF25546 - 1.7e-08 34.3 0.7 2.6e-08 33.8 0.7 1.3 1 0 0 1 1 1 1 Yip1 domain YIF1 PF03878.15 ORF25546 - 0.0098 15.4 12.1 0.51 9.8 12.1 2.1 1 1 0 1 1 1 1 YIF1 DEAD PF00270.29 ORF15812 - 4.7e-11 42.8 0.0 6.6e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 ORF15812 - 1.8e-05 24.8 0.0 2.6e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 ORF15812 - 0.01 16.1 0.4 0.039 14.2 0.4 1.9 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 ORF15812 - 0.055 13.3 0.0 0.088 12.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF15812 - 0.071 13.0 0.1 0.17 11.8 0.0 1.8 2 1 0 2 2 2 0 NACHT domain RsgA_GTPase PF03193.16 ORF15812 - 0.071 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 ORF15812 - 0.079 13.5 0.0 0.11 13.0 0.0 1.5 1 1 0 1 1 1 0 ABC transporter AAA_23 PF13476.6 ORF15812 - 0.1 13.1 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Alba PF01918.21 ORF152254 - 4e-11 42.6 0.1 7.4e-11 41.7 0.1 1.4 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 ORF152254 - 0.062 13.3 0.9 0.12 12.3 0.2 1.7 1 1 1 2 2 2 0 Rpp20 subunit of nuclear RNase MRP and P Med26 PF08711.11 ORF149868 - 3.1e-09 36.7 0.4 3.1e-09 36.7 0.4 2.3 3 0 0 3 3 3 1 TFIIS helical bundle-like domain AP3D1 PF06375.11 ORF149868 - 0.0015 18.8 22.7 0.0015 18.8 22.7 2.2 2 0 0 2 2 2 1 AP-3 complex subunit delta-1 Brr6_like_C_C PF10104.9 ORF147728 - 5.9e-19 68.2 6.6 9.9e-19 67.4 6.6 1.3 1 0 0 1 1 1 1 Di-sulfide bridge nucleocytoplasmic transport domain CLASP_N PF12348.8 ORF145654 - 3.4e-06 26.8 0.1 4.3e-05 23.2 0.1 2.4 1 1 0 1 1 1 1 CLASP N terminal HEAT PF02985.22 ORF145654 - 2.1e-05 24.4 0.0 0.35 11.3 0.0 3.8 4 0 0 4 4 4 2 HEAT repeat Adaptin_N PF01602.20 ORF145654 - 4.5e-05 22.2 0.3 0.00052 18.7 0.1 2.0 2 0 0 2 2 2 1 Adaptin N terminal region Cnd1 PF12717.7 ORF145654 - 0.00026 21.0 1.0 0.03 14.3 0.2 2.3 1 1 1 2 2 2 2 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 ORF145654 - 0.0016 18.8 0.0 0.0045 17.4 0.0 1.8 2 0 0 2 2 2 1 HEAT repeats DNA_alkylation PF08713.11 ORF145654 - 0.0022 17.7 0.1 0.024 14.4 0.0 2.2 1 1 1 3 3 3 1 DNA alkylation repair enzyme IFRD PF05004.13 ORF145654 - 0.0025 17.0 0.0 0.0051 16.0 0.0 1.4 1 1 0 1 1 1 1 Interferon-related developmental regulator (IFRD) IBN_N PF03810.19 ORF145654 - 0.0046 16.8 0.0 1.4 8.9 0.0 2.5 1 1 1 2 2 2 1 Importin-beta N-terminal domain Dopey_N PF04118.14 ORF145654 - 0.021 14.0 0.0 0.031 13.4 0.0 1.3 1 0 0 1 1 1 0 Dopey, N-terminal UPF0061 PF02696.14 ORF145654 - 0.028 13.2 0.5 1.5 7.5 0.0 2.0 1 1 1 2 2 2 0 Uncharacterized ACR, YdiU/UPF0061 family HEAT_EZ PF13513.6 ORF145654 - 0.061 13.9 0.0 0.3 11.6 0.0 2.1 2 0 0 2 2 2 0 HEAT-like repeat Vac14_Fab1_bd PF12755.7 ORF145654 - 0.12 13.0 2.2 16 6.2 0.4 2.6 1 1 1 2 2 2 0 Vacuolar 14 Fab1-binding region DUF507 PF04368.13 ORF145654 - 0.12 12.2 2.0 0.37 10.7 2.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF507) MA3 PF02847.17 ORF145654 - 0.27 11.2 2.1 3.2 7.8 0.1 3.0 2 1 1 3 3 3 0 MA3 domain GST_N PF02798.20 ORF145311 - 1.6e-09 37.9 0.1 3.8e-09 36.8 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF145311 - 3.5e-07 30.3 0.0 6e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF145311 - 0.017 15.5 0.0 0.037 14.4 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain UPF0016 PF01169.19 ORF13858 - 2.6e-26 91.8 22.1 1.4e-16 60.5 5.2 2.5 3 0 0 3 3 3 2 Uncharacterized protein family UPF0016 MRAP PF15183.6 ORF13858 - 0.0043 17.0 0.9 0.07 13.1 0.1 2.6 2 0 0 2 2 2 1 Melanocortin-2 receptor accessory protein family SPACA7 PF15307.6 ORF13858 - 0.06 13.6 1.9 0.18 12.1 1.9 1.7 2 0 0 2 2 2 0 Sperm acrosome-associated protein 7 FeoB_C PF07664.12 ORF13858 - 1.2 8.9 4.1 27 4.6 0.1 2.9 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus LAP1C PF05609.12 ORF136182 - 0.01 14.9 10.6 0.014 14.5 10.6 1.2 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Shisa PF13908.6 ORF136182 - 0.041 14.1 0.3 0.041 14.1 0.3 2.2 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator Macoilin PF09726.9 ORF136182 - 0.5 8.9 12.1 0.57 8.7 12.1 1.1 1 0 0 1 1 1 0 Macoilin family Peptidase_U49 PF10463.9 ORF136182 - 6.2 6.5 5.6 3.8 7.2 3.8 1.5 1 1 0 1 1 1 0 Peptidase U49 DUF3016 PF11454.8 ORF130815 - 0.078 12.7 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3016) 3Beta_HSD PF01073.19 ORF129675 - 7.1e-16 58.0 0.0 1e-15 57.5 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF129675 - 2.4e-11 43.6 0.0 3.7e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF129675 - 2.5e-07 30.2 0.0 3.3e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF129675 - 1.5e-05 24.3 0.1 0.00014 21.2 0.1 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF129675 - 0.00052 20.0 0.0 0.00075 19.4 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF129675 - 0.0022 17.5 0.1 0.0033 16.9 0.1 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase DUF5363 PF17320.2 ORF127743 - 0.022 14.6 0.2 0.054 13.4 0.2 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5363) Meth_synt_1 PF08267.12 ORF124083 - 0.0039 16.8 0.4 0.0066 16.0 0.4 1.4 1 0 0 1 1 1 1 Cobalamin-independent synthase, N-terminal domain LRRFIP PF09738.9 ORF124083 - 0.0071 15.9 1.1 0.029 13.8 0.1 2.0 1 1 1 2 2 2 1 LRRFIP family CCD48 PF15799.5 ORF124083 - 0.027 12.8 0.2 0.047 12.0 0.0 1.4 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 48 DUF5398 PF17376.2 ORF124083 - 0.042 14.5 0.7 7.2 7.3 0.4 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5398) bZIP_1 PF00170.21 ORF124083 - 0.052 13.6 0.9 0.052 13.6 0.9 2.7 3 0 0 3 3 3 0 bZIP transcription factor bZIP_2 PF07716.15 ORF124083 - 7.4 6.7 9.4 0.15 12.1 1.3 2.4 3 0 0 3 3 3 0 Basic region leucine zipper CytB6-F_Fe-S PF08802.10 ORF123084 - 2.9 8.0 5.5 6.4 6.9 0.0 3.8 4 0 0 4 4 4 0 Cytochrome B6-F complex Fe-S subunit CSTF2_hinge PF14327.6 ORF120140 - 5.3e-09 36.4 1.3 5.3e-09 36.4 1.3 2.3 2 0 0 2 2 2 1 Hinge domain of cleavage stimulation factor subunit 2 BPD_transp_2 PF02653.16 ORF114246 - 5.7e-45 153.6 12.4 6.8e-45 153.3 12.4 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component PIG-Y PF15159.6 ORF114246 - 0.046 14.6 0.1 24 5.9 0.0 2.7 2 1 0 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y DUF2975 PF11188.8 ORF114246 - 0.14 12.1 4.2 0.9 9.4 1.9 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2975) PAE PF03283.13 ORF113670 - 2.2e-47 161.9 0.1 6e-47 160.5 0.1 1.5 1 1 0 1 1 1 1 Pectinacetylesterase Rubis-subs-bind PF09273.11 ORF113291 - 1.9e-07 31.8 3.0 4e-07 30.8 3.0 1.6 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding SET PF00856.28 ORF113291 - 0.00013 22.4 0.0 0.0012 19.3 0.0 2.0 2 0 0 2 2 2 1 SET domain CARMIL_C PF16000.5 ORF113291 - 0.037 13.7 0.4 0.048 13.3 0.4 1.1 1 0 0 1 1 1 0 CARMIL C-terminus zf-RING_2 PF13639.6 ORF109372 - 3.3e-11 43.3 9.7 3.3e-11 43.3 9.7 2.2 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF109372 - 6.5e-09 35.4 8.7 2e-08 33.8 8.7 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF109372 - 2.8e-06 27.5 8.9 1.4e-05 25.2 8.9 2.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 ORF109372 - 7.6e-05 22.6 8.5 7.6e-05 22.6 8.5 1.9 2 0 0 2 2 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF109372 - 0.00017 21.4 7.2 0.00017 21.4 7.2 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF109372 - 0.00032 20.5 8.0 0.00032 20.5 8.0 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF109372 - 0.0011 18.9 5.5 0.0011 18.9 5.5 2.6 2 1 0 2 2 2 1 RING-type zinc-finger FANCL_C PF11793.8 ORF109372 - 0.006 16.7 8.1 0.16 12.2 8.1 2.8 1 1 0 1 1 1 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 ORF109372 - 0.03 14.2 7.2 0.083 12.8 7.2 1.8 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3H2C3 PF17122.5 ORF109372 - 0.037 14.0 3.6 0.051 13.6 2.0 2.1 2 0 0 2 2 1 0 Zinc-finger RINGv PF12906.7 ORF109372 - 0.052 13.7 8.5 0.16 12.1 8.5 1.9 1 0 0 1 1 1 0 RING-variant domain zf-ANAPC11 PF12861.7 ORF109372 - 0.074 13.1 6.3 0.13 12.3 4.4 2.4 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.6 ORF109372 - 0.28 11.1 7.1 1.3 9.0 2.6 2.8 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 DUF2070 PF09843.9 ORF109372 - 8.9 4.5 7.7 12 4.1 7.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) adh_short PF00106.25 ORF107370 - 3.6e-27 95.1 0.0 1.9e-19 69.9 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF107370 - 1.1e-19 70.9 0.0 2.8e-12 46.7 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF107370 - 0.00097 19.1 0.0 0.0014 18.6 0.0 1.2 1 0 0 1 1 1 1 KR domain baeRF_family6 PF18848.1 ORF107370 - 0.03 14.7 0.0 0.08 13.4 0.0 1.7 1 1 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 6 UPF0016 PF01169.19 ORF104477 - 2.6e-26 91.8 22.1 1.4e-16 60.5 5.2 2.5 3 0 0 3 3 3 2 Uncharacterized protein family UPF0016 MRAP PF15183.6 ORF104477 - 0.0043 17.0 0.9 0.07 13.1 0.1 2.6 2 0 0 2 2 2 1 Melanocortin-2 receptor accessory protein family SPACA7 PF15307.6 ORF104477 - 0.08 13.2 2.2 0.18 12.1 1.9 1.7 2 0 0 2 2 2 0 Sperm acrosome-associated protein 7 FeoB_C PF07664.12 ORF104477 - 1.2 8.9 4.1 27 4.6 0.1 2.9 2 0 0 2 2 2 0 Ferrous iron transport protein B C terminus FYVE_2 PF02318.16 ORF104126 - 0.53 10.5 5.9 2.4 8.4 0.3 2.9 3 0 0 3 3 3 0 FYVE-type zinc finger ABC2_membrane_3 PF12698.7 ORF104126 - 2.6 7.1 9.1 4.3 6.3 8.9 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein Yip1 PF04893.17 ORF102513 - 2e-09 37.4 13.0 2.7e-09 37.0 13.0 1.2 1 0 0 1 1 1 1 Yip1 domain UPF0640 PF15114.6 ORF102513 - 0.049 13.4 0.4 0.11 12.4 0.4 1.6 1 0 0 1 1 1 0 Uncharacterised protein family UPF0640 3Beta_HSD PF01073.19 ORF100511 - 7.1e-16 58.0 0.0 1e-15 57.5 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF100511 - 2.4e-11 43.6 0.0 3.7e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF100511 - 2.5e-07 30.2 0.0 3.3e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF100511 - 1.5e-05 24.3 0.1 0.00014 21.2 0.1 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF100511 - 0.00052 20.0 0.0 0.00075 19.4 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF100511 - 0.0022 17.5 0.1 0.0033 16.9 0.1 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase FmiP_Thoc5 PF09766.9 NODE_24285_length_857_cov_189.563260_g18901_i0reverse_frame_1 - 0.00021 20.7 4.7 0.00021 20.7 4.7 1.6 1 1 0 1 1 1 1 Fms-interacting protein/Thoc5 TraA PF05513.11 NODE_24221_length_859_cov_5.057039_g18842_i0forward_frame_2 - 0.18 12.2 0.0 0.49 10.7 0.0 1.7 2 0 0 2 2 2 0 TraA MAT1 PF06391.13 NODE_24221_length_859_cov_5.057039_g18842_i0forward_frame_2 - 2.9 7.7 8.1 4 7.2 8.1 1.1 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks67.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks67.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks67.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks67.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:52 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF3678 PF12435.8 NODE_24145_length_861_cov_3.213075_g18781_i0forward_frame_3 - 0.14 11.6 0.4 0.14 11.6 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) DUF4551 PF15087.6 NODE_24140_length_861_cov_64.594431_g18776_i0reverse_frame_2 - 1.8 7.3 5.8 2.3 6.9 5.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) FBPase PF00316.20 ORF97713 - 7.8e-34 116.8 0.5 1e-33 116.4 0.1 1.4 2 0 0 2 2 2 1 Fructose-1-6-bisphosphatase, N-terminal domain EamA PF00892.20 ORF9722 - 0.059 13.5 2.4 0.11 12.7 2.1 1.6 1 1 0 1 1 1 0 EamA-like transporter family Leu_Phe_trans PF03588.14 ORF90733 - 3.2e-70 235.0 0.0 4.2e-70 234.6 0.0 1.2 1 0 0 1 1 1 1 Leucyl/phenylalanyl-tRNA protein transferase Acetyltransf_6 PF13480.7 ORF90733 - 0.016 15.3 1.7 0.24 11.5 0.3 2.9 2 1 0 2 2 2 0 Acetyltransferase (GNAT) domain Nucleotid_trans PF03407.16 ORF87807 - 6.5e-08 32.8 0.1 9.3e-08 32.3 0.1 1.2 1 0 0 1 1 1 1 Nucleotide-diphospho-sugar transferase RAP80_UIM PF18282.1 ORF87807 - 0.15 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 RAP80 N-terminal ubiquitin interaction motif IL6 PF00489.17 ORF867 - 0.046 13.3 0.0 0.15 11.6 0.0 1.7 2 0 0 2 2 2 0 Interleukin-6/G-CSF/MGF family Pkinase PF00069.25 ORF85506 - 7.8e-08 32.0 0.1 1.9e-07 30.7 0.1 1.7 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85506 - 0.0078 15.5 0.0 0.014 14.7 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Pex2_Pex12 PF04757.14 ORF8275 - 0.074 12.6 0.2 0.19 11.3 0.0 1.7 2 0 0 2 2 2 0 Pex2 / Pex12 amino terminal region MOR2-PAG1_C PF14225.6 ORF81183 - 0.062 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Cell morphogenesis C-terminal Amidase_2 PF01510.25 ORF81183 - 0.12 12.8 0.0 0.19 12.2 0.0 1.3 1 0 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase Homeodomain PF00046.29 ORF76275 - 0.0015 18.3 0.5 0.0033 17.2 0.5 1.6 1 0 0 1 1 1 1 Homeodomain DUF604 PF04646.12 ORF76275 - 2 7.7 9.8 0.18 11.2 4.1 1.9 2 0 0 2 2 2 0 Protein of unknown function, DUF604 Pkinase PF00069.25 ORF71475 - 7.8e-08 32.0 0.1 1.9e-07 30.7 0.1 1.7 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF71475 - 0.0078 15.5 0.0 0.014 14.7 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Carb_anhydrase PF00194.21 ORF70413 - 9.3e-14 51.6 0.0 1.3e-13 51.1 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Rrn6 PF10214.9 ORF70413 - 9.8 4.5 5.3 13 4.1 5.3 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor End_beta_barrel PF12195.8 ORF66377 - 0.072 13.0 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 Beta barrel domain of bacteriophage endosialidase End_beta_propel PF12217.8 ORF66377 - 0.16 10.6 0.0 0.2 10.3 0.0 1.1 1 0 0 1 1 1 0 Catalytic beta propeller domain of bacteriophage endosialidase SRAP PF02586.14 ORF65730 - 2.2e-44 151.6 0.0 2.3e-43 148.3 0.0 2.0 2 0 0 2 2 2 1 SOS response associated peptidase (SRAP) CcmF_C PF16327.5 ORF61741 - 2.8e-60 204.3 11.6 5.9e-37 127.7 0.1 2.1 1 1 1 2 2 2 2 Cytochrome c-type biogenesis protein CcmF C-terminal TMEM100 PF16311.5 ORF61741 - 0.04 13.5 1.3 0.04 13.5 1.3 2.6 3 0 0 3 3 3 0 Transmembrane protein 100 Beta-lactamase2 PF13354.6 ORF61298 - 1.3e-39 135.9 0.0 1.6e-39 135.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 ORF61298 - 1.4e-30 106.7 0.0 2.7e-30 105.8 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 ORF61298 - 2.3e-06 27.3 0.0 5e-06 26.1 0.0 1.5 1 1 1 2 2 2 1 D-alanyl-D-alanine carboxypeptidase LGT PF01790.18 ORF57853 - 0.00015 21.1 1.0 0.00035 19.9 1.0 1.6 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase Beta-lactamase2 PF13354.6 ORF57517 - 1.3e-39 135.9 0.0 1.6e-39 135.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 ORF57517 - 1.4e-30 106.7 0.0 2.7e-30 105.8 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 ORF57517 - 2.3e-06 27.3 0.0 5e-06 26.1 0.0 1.5 1 1 1 2 2 2 1 D-alanyl-D-alanine carboxypeptidase FtsX PF02687.21 ORF56044 - 1.1e-12 48.3 7.0 1.1e-12 48.3 7.0 2.1 2 0 0 2 2 2 1 FtsX-like permease family Pam17 PF08566.10 ORF56044 - 0.029 14.2 0.3 0.029 14.2 0.3 1.5 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 MacB_PCD PF12704.7 ORF56044 - 0.034 14.5 0.0 0.034 14.5 0.0 2.1 2 1 0 2 2 2 0 MacB-like periplasmic core domain MscL PF01741.18 ORF56044 - 3 8.2 7.2 1.7 9.0 0.8 2.3 1 1 1 2 2 2 0 Large-conductance mechanosensitive channel, MscL adh_short PF00106.25 ORF53041 - 1.6e-22 79.9 0.0 2.3e-22 79.4 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF53041 - 1.3e-21 77.3 0.0 1.7e-21 76.9 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Homeodomain PF00046.29 ORF52216 - 0.0015 18.3 0.5 0.0033 17.2 0.5 1.6 1 0 0 1 1 1 1 Homeodomain DUF604 PF04646.12 ORF52216 - 2 7.7 9.8 0.18 11.2 4.1 1.9 2 0 0 2 2 2 0 Protein of unknown function, DUF604 EpmC PF04315.12 ORF46454 - 2.5e-80 267.9 0.4 4.4e-80 267.1 0.2 1.5 2 0 0 2 2 2 1 Elongation factor P hydroxylase YfcL PF08891.11 ORF46454 - 9.9e-34 115.5 0.2 1.9e-33 114.7 0.2 1.5 1 0 0 1 1 1 1 YfcL protein adh_short PF00106.25 ORF42448 - 3.9e-38 130.9 0.0 4.8e-38 130.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF42448 - 2.9e-21 76.1 0.0 3.6e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF42448 - 2.2e-07 31.0 0.0 3.4e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 ORF42448 - 0.00016 20.9 0.1 0.00033 19.9 0.0 1.4 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein DUF4303 PF14136.6 ORF42448 - 0.0026 17.5 0.0 0.0044 16.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4303) Shikimate_DH PF01488.20 ORF42448 - 0.0036 17.4 0.0 0.25 11.4 0.0 2.3 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 ORF42448 - 0.015 15.5 0.0 0.14 12.5 0.0 2.1 1 1 1 2 2 2 0 Saccharopine dehydrogenase NADP binding domain UDPG_MGDP_dh_N PF03721.14 ORF42448 - 0.036 13.7 0.1 0.06 12.9 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF4038 PF13204.6 ORF42448 - 0.04 13.5 0.1 0.061 13.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4038) 3HCDH_N PF02737.18 ORF42448 - 0.041 13.8 0.0 0.068 13.1 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyco_tran_WecB PF03808.13 ORF42448 - 0.055 13.4 0.0 0.093 12.7 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family NAD_binding_10 PF13460.6 ORF42448 - 0.069 13.0 0.0 0.14 12.1 0.0 1.6 1 0 0 1 1 1 0 NAD(P)H-binding Epimerase PF01370.21 ORF42448 - 0.073 12.5 0.0 1.1 8.7 0.0 2.4 1 1 1 2 2 2 0 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 ORF42448 - 0.074 12.1 0.0 0.2 10.7 0.0 1.7 1 1 1 2 2 2 0 RmlD substrate binding domain Pyr_redox_2 PF07992.14 ORF42448 - 0.098 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DUF3970 PF13113.6 ORF42448 - 0.099 12.9 2.0 0.29 11.4 0.6 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3970) DUF2043 PF09740.9 ORF42332 - 5.6 7.7 10.6 2.7 8.7 3.9 2.7 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2043) Methyltransf_16 PF10294.9 ORF41757 - 0.0026 17.5 0.0 0.0036 17.1 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_23 PF13489.6 ORF41757 - 0.017 14.9 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Mrr_cat PF04471.12 ORF41757 - 0.047 13.7 0.0 0.09 12.8 0.0 1.5 1 0 0 1 1 1 0 Restriction endonuclease PAN_4 PF14295.6 ORF41599 - 0.0049 16.8 0.6 0.0049 16.8 0.6 2.1 2 0 0 2 2 2 1 PAN domain PAN_1 PF00024.26 ORF41599 - 0.0073 16.2 2.2 0.026 14.5 0.2 2.2 2 0 0 2 2 2 1 PAN domain PAN_2 PF08276.11 ORF41599 - 0.11 12.7 0.5 0.11 12.7 0.5 2.1 2 0 0 2 2 2 0 PAN-like domain DUF4116 PF13475.6 ORF3792 - 3.3e-30 103.6 0.0 3e-07 30.1 0.0 6.2 3 2 3 6 6 6 5 Domain of unknown function (DUF4116) MFS_1 PF07690.16 ORF34715 - 2.7e-09 36.4 10.3 3.9e-09 35.9 10.3 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF34715 - 1.1 7.5 5.8 0.31 9.3 2.2 1.7 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Tra_M PF05261.11 ORF27447 - 0.0067 16.4 5.4 0.098 12.6 1.5 2.7 2 1 1 3 3 3 2 TraM protein, DNA-binding CRAL_TRIO PF00650.20 ORF25520 - 0.028 14.2 0.0 0.051 13.3 0.0 1.3 1 0 0 1 1 1 0 CRAL/TRIO domain DUF5473 PF17567.2 ORF25520 - 0.38 11.0 5.2 0.19 12.0 1.6 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5473) Homeodomain PF00046.29 ORF1640 - 0.0015 18.3 0.5 0.0033 17.2 0.5 1.6 1 0 0 1 1 1 1 Homeodomain DUF604 PF04646.12 ORF1640 - 2 7.7 9.8 0.18 11.2 4.1 1.9 2 0 0 2 2 2 0 Protein of unknown function, DUF604 RNA_pol_Rpc34 PF05158.12 ORF153023 - 1.2e-36 126.8 4.9 2.1e-32 112.9 2.0 2.0 1 1 1 2 2 2 2 RNA polymerase Rpc34 subunit MarR PF01047.22 ORF153023 - 0.0087 16.0 0.3 0.033 14.1 0.1 2.0 2 0 0 2 2 2 1 MarR family B-block_TFIIIC PF04182.12 ORF153023 - 0.12 12.5 0.4 0.26 11.5 0.2 1.6 2 0 0 2 2 2 0 B-block binding subunit of TFIIIC 3Beta_HSD PF01073.19 ORF151487 - 7e-16 58.0 0.0 1e-15 57.5 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF151487 - 2.3e-11 43.6 0.0 3.6e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF151487 - 2.4e-07 30.2 0.0 3.3e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.15 ORF151487 - 1.5e-05 24.3 0.1 0.00013 21.2 0.1 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 ORF151487 - 0.00052 20.0 0.0 0.00074 19.5 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 ORF151487 - 0.0019 17.7 0.1 0.0033 16.9 0.1 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase DUF2207 PF09972.9 ORF149505 - 0.0037 16.1 1.4 0.005 15.7 1.4 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) CHCH PF06747.13 ORF149505 - 0.12 12.5 1.4 0.37 11.0 1.4 1.9 1 0 0 1 1 1 0 CHCH domain DUF485 PF04341.12 ORF149505 - 2.3 8.2 7.7 1.1 9.2 5.1 1.8 1 1 1 2 2 2 0 Protein of unknown function, DUF485 PALP PF00291.25 ORF1463 - 1.8e-38 132.6 1.7 2.1e-38 132.4 1.7 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Beta-lactamase2 PF13354.6 ORF146180 - 1.3e-39 135.9 0.0 1.6e-39 135.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase enzyme family Beta-lactamase PF00144.24 ORF146180 - 1.4e-30 106.7 0.0 2.7e-30 105.8 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 ORF146180 - 2.3e-06 27.3 0.0 5e-06 26.1 0.0 1.5 1 1 1 2 2 2 1 D-alanyl-D-alanine carboxypeptidase DUF5056 PF16479.5 ORF145674 - 0.024 14.9 0.0 0.024 14.9 0.0 2.9 3 1 1 4 4 4 0 Domain of unknown function (DUF5056) SieB PF14163.6 ORF145674 - 1 8.8 4.5 2.6 7.6 0.0 2.7 2 1 1 3 3 3 0 Super-infection exclusion protein B Biotin_carb_C PF02785.19 ORF145600 - 4.9e-18 65.2 0.0 6.9e-17 61.5 0.0 2.4 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 ORF145600 - 3.1e-17 62.2 6.5 5.9e-17 61.3 6.5 1.5 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 ORF145600 - 3.6e-08 33.1 0.5 0.0019 18.0 0.0 2.4 1 1 1 2 2 2 2 Biotin-lipoyl like PCC_BT PF18140.1 ORF145600 - 4.2e-05 23.9 0.0 0.0001 22.6 0.0 1.6 1 0 0 1 1 1 1 Propionyl-coenzyme A carboxylase BT domain RnfC_N PF13375.6 ORF145600 - 0.003 17.5 0.1 0.0048 16.8 0.1 1.4 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain HlyD_3 PF13437.6 ORF145600 - 0.0092 16.7 0.2 0.52 11.1 0.0 2.4 2 0 0 2 2 2 1 HlyD family secretion protein NQRA PF05896.11 ORF145600 - 0.019 14.4 0.6 0.027 13.9 0.6 1.2 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) eIF-1a PF01176.19 ORF145600 - 0.028 14.2 0.0 2.7 7.9 0.0 2.7 2 0 0 2 2 2 0 Translation initiation factor 1A / IF-1 HlyD_D23 PF16576.5 ORF145600 - 0.073 12.3 0.4 1.5 8.0 0.0 2.1 1 1 1 2 2 2 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Phage_tail_T PF06223.12 ORF145600 - 0.26 11.8 1.4 0.73 10.4 1.3 1.8 1 1 0 1 1 1 0 Minor tail protein T HATPase_c PF02518.26 ORF136437 - 2.1e-21 76.5 0.0 5.4e-21 75.2 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF136437 - 1.5e-14 53.7 4.4 2.6e-14 53.0 3.6 1.8 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HAMP PF00672.25 ORF136437 - 3.4e-11 43.4 0.1 2.4e-10 40.6 0.0 2.4 2 0 0 2 2 2 1 HAMP domain HATPase_c_3 PF13589.6 ORF136437 - 3.3e-06 27.0 0.0 6.6e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 ORF136437 - 1.8e-05 24.7 0.0 3.7e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.6 ORF136437 - 0.023 14.6 0.0 0.12 12.3 0.0 2.0 2 0 0 2 2 2 0 GHKL domain STIMATE PF12400.8 ORF136395 - 2.2e-29 102.5 9.4 2.2e-29 102.5 9.4 1.6 2 0 0 2 2 2 1 STIMATE family TB2_DP1_HVA22 PF03134.19 ORF136395 - 0.12 12.3 2.6 0.43 10.5 2.6 2.0 1 1 0 1 1 1 0 TB2/DP1, HVA22 family Nucleotid_trans PF03407.16 ORF131247 - 0.056 13.4 0.0 0.073 13.0 0.0 1.2 1 0 0 1 1 1 0 Nucleotide-diphospho-sugar transferase Homeodomain PF00046.29 ORF127960 - 0.0015 18.3 0.5 0.0033 17.2 0.5 1.6 1 0 0 1 1 1 1 Homeodomain DUF604 PF04646.12 ORF127960 - 2 7.7 9.8 0.18 11.2 4.1 1.9 2 0 0 2 2 2 0 Protein of unknown function, DUF604 Arm PF00514.23 ORF126267 - 2.2e-22 78.3 17.0 1.4e-05 24.9 0.0 6.5 6 1 0 6 6 6 5 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 ORF126267 - 0.0072 16.7 0.6 0.0072 16.7 0.6 3.9 1 1 1 3 3 3 1 HEAT repeats RICTOR_N PF14664.6 ORF126267 - 0.0085 15.1 0.0 0.021 13.9 0.0 1.6 2 1 0 2 2 2 1 Rapamycin-insensitive companion of mTOR, N-term Aconitase_B_N PF11791.8 ORF126267 - 0.033 14.3 2.6 0.32 11.0 0.1 3.0 1 1 1 3 3 3 0 Aconitate B N-terminal domain ECH_1 PF00378.20 ORF125150 - 4e-72 242.6 0.0 4.6e-72 242.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF125150 - 2.4e-35 122.6 0.2 6e-30 104.9 0.1 2.1 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase DUF2207 PF09972.9 ORF119641 - 0.14 10.9 5.6 0.24 10.1 5.5 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Presenilin PF01080.17 ORF119641 - 0.64 8.7 6.3 0.88 8.3 6.3 1.1 1 0 0 1 1 1 0 Presenilin Sod_Fe_C PF02777.18 ORF118511 - 7.8e-41 138.4 0.2 1.7e-40 137.3 0.0 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 ORF118511 - 2.4e-33 114.5 2.2 2.4e-33 114.5 2.2 1.7 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain VEG PF06257.11 ORF116884 - 1.4 9.0 7.9 0.26 11.4 1.2 2.6 2 0 0 2 2 2 0 Biofilm formation stimulator VEG Dsh_C PF12316.8 ORF116884 - 2.1 8.7 10.4 3.5 8.0 10.4 1.4 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal FTR1 PF03239.14 ORF116884 - 4 6.5 3.9 19 4.3 0.6 2.3 2 0 0 2 2 2 0 Iron permease FTR1 family DUF87 PF01935.17 ORF116884 - 5.6 7.0 12.9 0.036 14.1 1.2 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain MT0933_antitox PF14013.6 ORF116884 - 6.4 7.2 24.6 7.6 6.9 2.1 3.4 2 1 0 2 2 2 0 MT0933-like antitoxin protein KH_1 PF00013.29 ORF111323 - 2.7e-21 75.1 3.0 5.1e-12 45.4 0.1 3.2 3 0 0 3 3 3 2 KH domain KH_2 PF07650.17 ORF111323 - 0.0024 17.6 1.0 0.0062 16.3 1.0 1.8 1 0 0 1 1 1 1 KH domain KH_5 PF13184.6 ORF111323 - 0.095 12.8 0.9 0.57 10.3 0.2 2.5 2 0 0 2 2 2 0 NusA-like KH domain EamA PF00892.20 ORF111110 - 0.059 13.5 2.4 0.11 12.7 2.1 1.6 1 1 0 1 1 1 0 EamA-like transporter family CCT PF06203.14 ORF10869 - 0.00061 19.8 12.4 0.0016 18.5 12.4 1.7 1 0 0 1 1 1 1 CCT motif C2 PF00168.30 ORF102777 - 1.7e-30 105.3 0.0 4.3e-22 78.4 0.0 2.2 2 0 0 2 2 2 2 C2 domain DUF3254 PF11630.8 NODE_24462_length_853_cov_62.913203_g19042_i0reverse_frame_1 - 0.065 13.4 4.0 0.44 10.7 0.1 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF3254) SNARE_assoc PF09335.11 NODE_24422_length_854_cov_3.357753_g19008_i0reverse_frame_1 - 1.7e-18 67.2 5.0 1.7e-18 67.2 5.0 1.8 2 0 0 2 2 2 1 SNARE associated Golgi protein D5_N PF08706.11 NODE_24407_length_854_cov_133.235653_g15798_i1forward_frame_1 - 0.41 10.9 7.0 0.68 10.2 7.0 1.3 1 0 0 1 1 1 0 D5 N terminal like Borrelia_P83 PF05262.11 NODE_24407_length_854_cov_133.235653_g15798_i1forward_frame_1 - 8.4 4.8 24.7 12 4.3 24.7 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein DUF4818 PF16089.5 NODE_24376_length_855_cov_3.168293_g17571_i1forward_frame_1 - 0.025 15.1 1.5 0.04 14.4 1.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4818) AA_permease PF00324.21 NODE_24285_length_857_cov_189.563260_g18901_i0reverse_frame_2 - 0.12 10.9 0.1 0.16 10.5 0.1 1.1 1 0 0 1 1 1 0 Amino acid permease Peptidase_M9_N PF08453.10 NODE_24265_length_858_cov_3.657351_g18883_i0forward_frame_3 - 0.019 14.7 1.6 0.027 14.2 0.1 1.9 2 0 0 2 2 2 0 Peptidase family M9 N-terminal LRR_9 PF14580.6 NODE_24262_length_858_cov_4.942892_g18880_i0reverse_frame_2 - 1.1e-09 38.1 0.9 1.1e-09 38.1 0.9 2.3 3 0 0 3 3 3 1 Leucine-rich repeat LRR_4 PF12799.7 NODE_24262_length_858_cov_4.942892_g18880_i0reverse_frame_2 - 3.1e-06 27.4 14.0 0.00029 21.2 1.8 3.5 2 1 3 5 5 5 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 NODE_24262_length_858_cov_4.942892_g18880_i0reverse_frame_2 - 0.093 12.5 7.0 0.95 9.3 4.5 3.3 1 1 1 2 2 2 0 Leucine rich repeat Helicase_C PF00271.31 ORF97570 - 4.2e-15 56.0 0.0 8e-15 55.1 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF97570 - 6.8e-07 28.8 0.0 1e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Helicase_C_2 PF13307.6 ORF97570 - 0.16 12.2 0.0 0.31 11.2 0.0 1.5 1 1 0 1 1 1 0 Helicase C-terminal domain Myb_DNA-binding PF00249.31 ORF93471 - 1.2e-23 83.0 2.0 7.6e-13 48.4 0.2 3.3 3 0 0 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF93471 - 7e-20 71.0 7.8 2.8e-11 43.5 0.7 3.3 2 1 1 3 3 3 3 Myb-like DNA-binding domain USP8_dimer PF08969.11 ORF93471 - 0.00057 20.1 2.8 0.0011 19.1 2.8 1.5 1 0 0 1 1 1 1 USP8 dimerisation domain DUF3767 PF12597.8 ORF93471 - 0.0022 17.8 0.8 0.0059 16.4 0.2 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF3767) WIYLD PF10440.9 ORF93471 - 0.0062 16.3 0.8 1.3 8.9 0.1 2.5 2 0 0 2 2 2 2 Ubiquitin-binding WIYLD domain Death PF00531.22 ORF93471 - 0.066 13.4 0.2 1 9.6 0.0 2.9 3 1 0 3 3 3 0 Death domain Mistic PF11458.8 ORF93471 - 0.19 11.7 3.4 7.5 6.6 0.4 2.9 3 0 0 3 3 3 0 Membrane-integrating protein Mistic Sgf11 PF08209.11 ORF93471 - 0.29 10.8 0.8 8 6.1 0.3 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-RING_2 PF13639.6 ORF83802 - 1.6e-11 44.4 8.7 1.6e-11 44.4 8.7 2.8 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF83802 - 7.6e-08 32.0 10.0 1.4e-07 31.1 8.6 2.3 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF83802 - 4.4e-06 26.4 15.0 8.6e-06 25.5 8.2 2.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF83802 - 2e-05 24.5 5.0 0.00011 22.1 2.0 2.8 2 1 0 2 2 2 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF83802 - 4.9e-05 23.5 10.2 4.9e-05 23.5 10.2 2.5 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF83802 - 0.00078 19.3 5.2 0.00078 19.3 5.2 2.7 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF83802 - 0.0027 17.5 9.9 0.0027 17.5 9.9 2.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) DDE_1 PF03184.19 ORF83802 - 0.03 14.0 0.0 0.072 12.7 0.0 1.5 1 1 0 1 1 1 0 DDE superfamily endonuclease zf-RING_5 PF14634.6 ORF83802 - 0.035 14.1 7.6 0.035 14.1 7.6 2.6 2 0 0 2 2 2 0 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF83802 - 0.16 11.6 6.5 0.59 9.8 6.5 2.0 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF83802 - 3.4 7.6 15.3 0.35 10.8 7.8 2.9 2 1 1 3 3 3 0 Prokaryotic RING finger family 4 DUF2384 PF09722.10 ORF82902 - 0.12 12.4 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2384) AlkA_N PF06029.11 ORF82173 - 1.5e-21 76.8 0.0 2.6e-21 76.1 0.0 1.4 1 0 0 1 1 1 1 AlkA N-terminal domain HhH-GPD PF00730.25 ORF82173 - 5.1e-10 39.8 0.0 8.1e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH_5 PF14520.6 ORF82173 - 0.16 12.6 0.0 5.8 7.6 0.0 2.8 2 1 1 3 3 3 0 Helix-hairpin-helix domain Spc7 PF08317.11 ORF81977 - 0.00012 21.0 24.0 0.0087 15.0 5.4 2.1 2 0 0 2 2 2 2 Spc7 kinetochore protein DUF2353 PF09789.9 ORF81977 - 0.00023 20.6 13.7 0.027 13.8 3.2 2.6 1 1 0 2 2 2 2 Uncharacterized coiled-coil protein (DUF2353) Myosin_tail_1 PF01576.19 ORF81977 - 0.013 13.3 21.6 0.074 10.9 7.7 2.2 2 0 0 2 2 2 0 Myosin tail Atg14 PF10186.9 ORF81977 - 0.015 14.4 17.4 0.017 14.2 4.1 2.1 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Filament PF00038.21 ORF81977 - 0.02 14.5 21.7 0.068 12.7 6.9 2.1 2 0 0 2 2 2 0 Intermediate filament protein bZIP_1 PF00170.21 ORF81977 - 0.078 13.1 0.1 0.078 13.1 0.1 3.5 3 0 0 3 3 3 0 bZIP transcription factor ADIP PF11559.8 ORF81977 - 0.13 12.4 22.3 0.042 13.9 4.2 2.6 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding TPR_8 PF13181.6 ORF81977 - 0.21 11.9 1.6 2.7 8.4 0.2 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF1664 PF07889.12 ORF81977 - 0.23 11.5 9.1 0.36 10.9 2.2 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) Syntaxin-6_N PF09177.11 ORF81977 - 0.29 11.7 13.8 0.074 13.6 3.1 3.2 2 1 0 2 2 2 0 Syntaxin 6, N-terminal Glutaredoxin2_C PF04399.13 ORF81977 - 0.48 10.3 3.5 0.91 9.4 0.3 2.4 2 0 0 2 2 2 0 Glutaredoxin 2, C terminal domain FlaC_arch PF05377.11 ORF81977 - 0.57 10.6 0.1 0.57 10.6 0.1 3.4 5 0 0 5 5 3 0 Flagella accessory protein C (FlaC) YabA PF06156.13 ORF81977 - 0.67 10.6 10.4 0.28 11.8 0.9 2.9 2 1 0 2 2 2 0 Initiation control protein YabA DUF3584 PF12128.8 ORF81977 - 0.9 7.0 29.8 0.13 9.7 10.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) NPV_P10 PF05531.12 ORF81977 - 1.3 9.6 6.7 2.5 8.6 0.2 3.4 3 2 0 3 3 2 0 Nucleopolyhedrovirus P10 protein TPR_MLP1_2 PF07926.12 ORF81977 - 2 8.5 37.4 0.21 11.6 15.5 3.1 2 2 1 3 3 3 0 TPR/MLP1/MLP2-like protein Fez1 PF06818.15 ORF81977 - 2.1 8.7 21.7 5.1 7.5 6.9 2.3 2 0 0 2 2 2 0 Fez1 CLZ PF16526.5 ORF81977 - 3.4 8.1 14.2 9 6.7 0.4 4.4 4 1 1 5 5 5 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels BLOC1_2 PF10046.9 ORF81977 - 3.5 8.0 13.9 0.13 12.6 1.6 3.4 2 2 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 MerR-DNA-bind PF09278.11 ORF81977 - 3.6 8.2 8.0 21 5.7 0.4 3.7 3 0 0 3 3 3 0 MerR, DNA binding Het-C PF07217.11 ORF81977 - 4.6 5.6 9.2 3 6.3 0.5 2.5 2 1 1 3 3 3 0 Heterokaryon incompatibility protein Het-C HAUS-augmin3 PF14932.6 ORF81977 - 6 6.4 25.2 0.19 11.3 7.7 2.3 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 UPF0242 PF06785.11 ORF81977 - 9 6.4 18.6 2.8 8.0 5.0 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus YabA PF06156.13 ORF81609 - 0.14 12.8 22.6 0.096 13.3 2.5 3.6 2 2 2 4 4 4 0 Initiation control protein YabA DUF2203 PF09969.9 ORF81609 - 0.22 12.3 9.9 2.7 8.7 0.3 3.2 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2203) Csm1_N PF18504.1 ORF81609 - 0.26 11.7 0.1 0.26 11.7 0.1 4.7 5 1 0 5 5 5 0 Csm1 N-terminal domain ABC_tran_CTD PF16326.5 ORF81609 - 2.2 8.6 14.9 0.92 9.8 1.0 3.8 2 1 0 3 3 3 0 ABC transporter C-terminal domain Thioesterase PF00975.20 ORF81609 - 2.8 8.0 7.2 0.66 10.0 2.0 2.1 1 1 1 2 2 2 0 Thioesterase domain PKcGMP_CC PF16808.5 ORF81609 - 4.9 7.1 17.3 0.25 11.2 1.3 3.6 4 0 0 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Lectin_N PF03954.14 ORF81609 - 7.4 6.3 12.9 9.4 6.0 2.6 3.5 2 1 1 3 3 3 0 Hepatic lectin, N-terminal domain DUF4140 PF13600.6 ORF81609 - 8.6 6.9 11.7 2.1 8.9 1.8 3.2 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) HalX PF08663.10 ORF81609 - 8.9 6.7 13.5 58 4.1 6.6 3.4 2 1 0 2 2 2 0 HalX domain zf-RING_2 PF13639.6 ORF81528 - 6.9e-12 45.5 8.5 6.9e-12 45.5 8.5 2.7 3 0 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF81528 - 9.2e-08 31.7 8.5 9.2e-08 31.7 8.5 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF81528 - 1.8e-05 24.5 8.2 1.8e-05 24.5 8.2 2.5 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF81528 - 4.3e-05 23.7 10.1 4.3e-05 23.7 10.1 2.6 3 1 0 3 3 3 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF81528 - 0.00016 21.6 6.0 0.00022 21.2 1.9 2.8 2 1 1 3 3 3 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF81528 - 0.00021 21.1 5.5 0.00021 21.1 5.5 3.0 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF81528 - 0.0012 18.6 9.9 0.0012 18.6 9.9 2.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF81528 - 0.011 15.6 8.0 0.011 15.6 8.0 2.6 2 0 0 2 2 2 0 zinc-RING finger domain GlgX_C PF18390.1 ORF80684 - 0.018 14.8 0.2 0.53 10.1 0.1 2.4 2 0 0 2 2 2 0 Glycogen debranching enzyme C-terminal domain DUF5632 PF18646.1 ORF7697 - 0.07 13.2 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5632) DnaJ PF00226.31 ORF76429 - 6.8e-18 64.6 0.0 1.4e-17 63.6 0.0 1.6 1 0 0 1 1 1 1 DnaJ domain Usp PF00582.26 ORF75740 - 1.1e-13 51.9 0.0 6.6e-10 39.6 0.0 2.3 2 0 0 2 2 2 2 Universal stress protein family EAF PF09816.9 ORF75740 - 0.051 14.0 0.0 0.11 13.0 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase II transcription elongation factor DUF2016 PF09436.10 ORF75740 - 0.18 11.7 0.0 0.34 10.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) PqiA PF04403.13 ORF74912 - 6.7e-64 214.4 21.4 2.3e-43 147.7 13.3 2.0 2 0 0 2 2 2 2 Paraquat-inducible protein A PSI_PsaF PF02507.15 ORF71079 - 4e-41 140.7 0.1 6.1e-41 140.1 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF71079 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein TRAM_LAG1_CLN8 PF03798.16 ORF70009 - 4.7e-13 49.3 15.1 4.7e-13 49.3 15.1 2.7 2 1 1 3 3 3 1 TLC domain Pro_isomerase PF00160.21 ORF69649 - 1.9e-37 129.0 0.0 2.8e-37 128.4 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TPR_1 PF00515.28 ORF69649 - 1.8e-08 33.8 2.2 0.00015 21.4 0.2 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF69649 - 3e-07 30.5 3.0 4.8e-07 29.8 3.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 ORF69649 - 2.3e-06 27.2 0.3 0.025 14.3 0.4 2.8 1 1 1 2 2 2 2 TPR repeat TPR_2 PF07719.17 ORF69649 - 0.0002 21.2 5.4 0.00037 20.4 0.6 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF69649 - 0.00039 20.4 0.1 0.098 12.9 0.0 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 ORF69649 - 0.0044 16.3 2.3 0.0066 15.7 2.3 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF69649 - 0.0051 17.1 0.4 0.5 10.9 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat Rho_Binding PF08912.11 ORF69649 - 0.013 16.3 2.5 0.55 11.1 0.1 2.4 2 0 0 2 2 2 0 Rho Binding TPR_16 PF13432.6 ORF69649 - 0.017 15.7 5.7 0.11 13.2 5.7 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF69649 - 0.026 15.1 0.4 0.093 13.4 0.4 2.0 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF69649 - 0.15 12.9 4.8 0.21 12.5 1.8 2.7 1 1 1 2 2 2 0 Tetratricopeptide repeat CHD5 PF04420.14 ORF69649 - 0.18 11.7 0.0 0.34 10.7 0.0 1.4 1 0 0 1 1 1 0 CHD5-like protein TPR_12 PF13424.6 ORF69649 - 0.3 11.4 5.7 1.5 9.1 5.7 2.1 1 1 0 1 1 1 0 Tetratricopeptide repeat Axin_b-cat_bind PF08833.10 ORF66957 - 0.11 12.7 0.8 1.1 9.4 1.5 2.3 2 0 0 2 2 2 0 Axin beta-catenin binding domain PSI_PsaF PF02507.15 ORF63563 - 4e-41 140.7 0.1 6.1e-41 140.1 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF63563 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein ECH_1 PF00378.20 ORF63004 - 3.3e-81 272.3 0.1 4.1e-81 272.0 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF63004 - 3.3e-35 122.1 2.2 1.5e-31 110.2 0.3 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase DUF2313 PF10076.9 ORF63004 - 0.0089 15.9 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein conserved in bacteria (DUF2313) MFS_1 PF07690.16 ORF61287 - 5.5e-17 61.7 1.0 6.8e-17 61.4 1.0 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_4 PF06779.14 ORF61287 - 0.008 15.5 3.2 0.015 14.6 3.2 1.4 1 0 0 1 1 1 1 Uncharacterised MFS-type transporter YbfB PROL5-SMR PF15621.6 ORF61287 - 0.016 15.7 0.0 0.029 14.9 0.0 1.5 1 0 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Bac_rhamnosid6H PF17389.2 ORF59987 - 2.6e-22 79.5 0.2 3e-22 79.3 0.2 1.1 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Bac_rhamnosid_C PF17390.2 ORF59987 - 2.3e-05 24.1 0.1 4.9e-05 23.0 0.1 1.5 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase C-terminal domain E7 PF00527.18 ORF58076 - 0.016 15.4 0.4 0.038 14.2 0.4 1.6 1 0 0 1 1 1 0 E7 protein, Early protein Radial_spoke PF04712.12 ORF56549 - 2.3e-17 63.1 0.1 1.2e-06 27.7 0.1 3.2 3 0 0 3 3 3 3 Radial spokehead-like protein NABP PF07990.12 ORF53768 - 0.025 14.1 5.4 0.03 13.9 5.4 1.1 1 0 0 1 1 1 0 Nucleic acid binding protein NABP DASH_Dad3 PF08656.10 ORF53768 - 0.066 13.3 4.6 0.35 11.0 0.4 2.8 2 1 0 2 2 2 0 DASH complex subunit Dad3 Spectrin PF00435.21 ORF53768 - 0.22 12.0 0.3 0.22 12.0 0.3 2.8 3 1 0 3 3 3 0 Spectrin repeat DUF724 PF05266.14 ORF53768 - 0.25 11.2 15.3 0.066 13.0 6.5 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF724) DUF4337 PF14235.6 ORF53768 - 0.58 10.3 2.3 4.2 7.5 0.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) SLATT_fungal PF18142.1 ORF53768 - 0.97 9.4 4.0 1.1 9.3 0.7 2.2 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain Prefoldin_2 PF01920.20 ORF53768 - 1 9.4 17.1 1.1 9.3 2.5 3.5 3 0 0 3 3 3 0 Prefoldin subunit CorA PF01544.18 ORF53768 - 2.6 7.3 7.7 0.84 8.9 0.8 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein DASH_Dam1 PF08653.10 ORF53768 - 7.2 6.5 8.6 7.9 6.4 0.1 3.6 4 0 0 4 4 4 0 DASH complex subunit Dam1 PSI_PsaF PF02507.15 ORF53268 - 4e-41 140.7 0.1 6.1e-41 140.1 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF53268 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein Sel1 PF08238.12 ORF49858 - 9.8e-10 38.8 0.2 0.005 17.5 0.0 3.9 3 1 0 3 3 3 2 Sel1 repeat AAA_12 PF13087.6 ORF49229 - 8.3e-45 152.9 0.0 9.6e-45 152.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 ORF49229 - 0.00017 21.0 0.0 0.00025 20.4 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) UvrD_C PF13361.6 ORF49229 - 0.012 15.0 0.0 1.7 7.9 0.0 2.1 2 0 0 2 2 2 0 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 ORF49229 - 0.015 15.1 0.2 3.2 7.6 0.0 3.2 3 0 0 3 3 3 0 UvrD-like helicase C-terminal domain Glyco_transf_7N PF13733.6 ORF49229 - 0.037 13.7 0.0 0.09 12.4 0.0 1.7 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 Peptidase_C12 PF01088.21 ORF48931 - 2.3e-43 148.4 0.0 2.8e-43 148.1 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 UBA PF00627.31 ORF48931 - 2.1e-12 46.7 0.6 4.7e-12 45.6 0.6 1.6 1 0 0 1 1 1 1 UBA/TS-N domain Ubiq-assoc PF09145.10 ORF48931 - 0.032 14.2 0.7 0.23 11.5 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-associated UBA_4 PF14555.6 ORF48931 - 0.042 13.7 0.4 0.11 12.3 0.4 1.7 1 0 0 1 1 1 0 UBA-like domain Axin_b-cat_bind PF08833.10 ORF4841 - 0.11 12.7 0.8 1.1 9.4 1.5 2.3 2 0 0 2 2 2 0 Axin beta-catenin binding domain STI1 PF17830.1 ORF44187 - 1.2e-14 53.9 1.2 4.6e-08 32.9 0.0 2.9 3 0 0 3 3 3 2 STI1 domain HECW1_helix PF18436.1 ORF44187 - 0.015 15.4 0.0 0.042 14.0 0.0 1.8 1 0 0 1 1 1 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 Ins_allergen_rp PF06757.13 ORF44187 - 0.039 13.9 1.2 2.8 7.9 0.0 2.8 3 1 1 4 4 4 0 Insect allergen related repeat, nitrile-specifier detoxification eIF3_N PF09440.10 ORF44187 - 2.3 8.7 9.1 0.58 10.6 0.7 3.1 2 1 1 3 3 3 0 eIF3 subunit 6 N terminal domain FHA PF00498.26 ORF38072 - 6.6e-15 55.2 0.0 1e-14 54.6 0.0 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF38072 - 0.00045 20.5 0.0 0.0013 19.0 0.0 1.7 1 1 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain POM121 PF15229.6 ORF3782 - 0.06 13.0 1.4 0.089 12.4 1.4 1.2 1 0 0 1 1 1 0 POM121 family NDK PF00334.19 ORF37667 - 6.9e-36 123.2 0.0 7.4e-32 110.2 0.0 2.2 2 0 0 2 2 2 2 Nucleoside diphosphate kinase ThiW PF09512.10 ORF36965 - 0.0022 18.1 0.6 0.0044 17.1 0.6 1.5 1 0 0 1 1 1 1 Thiamine-precursor transporter protein (ThiW) SpoIIIAH PF12685.7 ORF35355 - 0.019 14.8 8.9 0.029 14.2 8.9 1.3 1 0 0 1 1 1 0 SpoIIIAH-like protein NUDIX PF00293.28 ORF33718 - 3.8e-18 65.8 0.0 5.3e-18 65.3 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Rox3 PF08633.10 ORF30247 - 0.014 15.7 1.5 0.021 15.1 1.5 1.2 1 0 0 1 1 1 0 Rox3 mediator complex subunit Nucleo_P87 PF07267.11 ORF30247 - 3.3 6.5 4.4 4.5 6.0 4.4 1.1 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Peptidase_C1 PF00112.23 ORF30046 - 3.8e-05 23.9 0.0 0.0004 20.5 0.0 2.1 1 1 0 2 2 2 1 Papain family cysteine protease NKWYS PF10364.9 ORF27687 - 9.4e-16 58.2 0.3 1.5e-15 57.6 0.3 1.3 1 0 0 1 1 1 1 Putative capsular polysaccharide synthesis protein UL17 PF17640.2 ORF26367 - 4.8 7.2 6.2 26 4.9 0.2 2.9 3 1 1 4 4 4 0 Uncharacterized UL17 RasGAP_C PF03836.15 ORF23050 - 0.00059 20.0 0.3 0.00098 19.3 0.3 1.3 1 0 0 1 1 1 1 RasGAP C-terminus HTH_Tnp_IS630 PF01710.16 ORF23050 - 0.093 12.8 0.6 0.17 11.9 0.0 1.7 2 0 0 2 2 2 0 Transposase Herpes_UL25 PF01499.16 ORF23050 - 0.11 11.0 1.7 0.14 10.7 1.7 1.2 1 0 0 1 1 1 0 Herpesvirus UL25 family Hrs_helical PF12210.8 ORF23050 - 0.58 10.7 6.2 0.3 11.6 3.5 1.9 2 0 0 2 2 2 0 Hepatocyte growth factor-regulated tyrosine kinase substrate Aa_trans PF01490.18 ORF21896 - 1.2e-20 73.6 25.5 1.8e-20 73.0 25.5 1.3 1 1 0 1 1 1 1 Transmembrane amino acid transporter protein Peptidase_M48_N PF16491.5 ORF21896 - 4.9 7.0 17.7 0.044 13.7 8.7 1.9 2 0 0 2 2 2 0 CAAX prenyl protease N-terminal, five membrane helices Peptidase_S49_N PF08496.10 ORF21064 - 0.049 13.7 0.3 0.8 9.8 0.1 2.5 2 1 0 2 2 2 0 Peptidase family S49 N-terminal FAD_binding_7 PF03441.14 ORF15735 - 3.9e-43 147.3 1.0 4.9e-43 147.0 1.0 1.1 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase ABC_export PF16962.5 ORF151910 - 0.092 11.2 2.0 0.26 9.7 0.4 1.9 2 0 0 2 2 2 0 Putative ABC exporter zf-RING_2 PF13639.6 ORF151781 - 6.9e-12 45.5 8.5 6.9e-12 45.5 8.5 2.7 3 0 0 3 3 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF151781 - 2.4e-08 33.6 8.5 9.2e-08 31.7 8.5 2.1 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF151781 - 1.8e-05 24.5 8.2 1.8e-05 24.5 8.2 2.6 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF151781 - 4.3e-05 23.7 10.1 4.3e-05 23.7 10.1 2.5 3 1 0 3 3 3 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF151781 - 0.00017 21.5 6.0 0.00022 21.2 1.9 2.7 2 1 1 3 3 3 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF151781 - 0.00021 21.1 5.5 0.00021 21.1 5.5 2.8 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF151781 - 0.0012 18.6 9.9 0.0012 18.6 9.9 2.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF151781 - 0.011 15.6 8.0 0.011 15.6 8.0 2.6 2 0 0 2 2 2 0 zinc-RING finger domain FAD_binding_1 PF00667.20 ORF15136 - 0.059 12.9 0.0 0.093 12.3 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain PSI_PsaF PF02507.15 ORF148562 - 4e-41 140.7 0.1 6.1e-41 140.1 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF148562 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein COX1 PF00115.20 ORF148270 - 5.6e-13 48.5 8.0 5.6e-13 48.5 8.0 2.1 2 0 0 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I Yip1 PF04893.17 ORF148270 - 0.00024 20.9 4.2 0.13 12.0 0.7 2.2 2 0 0 2 2 2 2 Yip1 domain ABC2_membrane_3 PF12698.7 ORF148270 - 0.031 13.4 1.7 0.042 13.0 1.7 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2207 PF09972.9 ORF148270 - 0.046 12.5 0.6 3.6 6.2 0.5 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) SUR7 PF06687.12 ORF148270 - 0.2 11.3 0.1 0.2 11.3 0.1 1.8 2 0 0 2 2 2 0 SUR7/PalI family RicinB_lectin_2 PF14200.6 ORF144377 - 4.5e-06 27.3 0.0 5.9e-05 23.7 0.0 2.4 1 1 1 2 2 2 1 Ricin-type beta-trefoil lectin domain-like Lysine_decarbox PF03641.14 ORF1413 - 2.5e-23 82.6 0.0 3.4e-23 82.2 0.0 1.2 1 0 0 1 1 1 1 Possible lysine decarboxylase LDcluster4 PF18306.1 ORF1413 - 0.00011 21.8 0.1 0.00024 20.8 0.1 1.5 1 1 0 1 1 1 1 SLOG cluster4 family DUF3763 PF12592.8 ORF134843 - 0.012 15.6 0.0 6.1 7.0 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3763) Arf PF00025.21 ORF133733 - 3.6e-73 244.7 0.2 5e-73 244.3 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF133733 - 7.3e-15 54.9 0.0 1.1e-14 54.3 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF133733 - 1.8e-14 54.0 0.0 2.9e-14 53.3 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF133733 - 2.6e-13 49.9 0.0 3.4e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF133733 - 6.6e-11 42.0 1.3 3.7e-07 29.6 0.3 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF133733 - 6.7e-09 35.4 0.0 8.8e-09 35.1 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF133733 - 2.5e-05 24.3 0.0 4.4e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase DHHC PF01529.20 ORF13274 - 7.7e-30 103.7 8.0 1.4e-29 102.9 8.0 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase IGFBP PF00219.18 ORF13274 - 0.55 10.9 4.8 1.2 9.9 4.8 1.5 1 0 0 1 1 1 0 Insulin-like growth factor binding protein Aminotran_1_2 PF00155.21 ORF132153 - 4.2e-30 105.1 0.0 4.7e-30 105.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 ORF132153 - 4.6e-06 25.7 0.0 1.2e-05 24.3 0.0 1.7 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase Radial_spoke PF04712.12 ORF124059 - 4.9e-16 58.8 0.5 1.8e-08 33.8 0.2 2.2 1 1 0 2 2 2 2 Radial spokehead-like protein WD40 PF00400.32 ORF12339 - 9.8e-06 26.2 0.0 0.12 13.3 0.0 3.3 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF12339 - 0.00028 21.1 0.4 0.03 14.6 0.0 3.5 2 2 1 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain Coatomer_WDAD PF04053.14 ORF12339 - 0.0043 16.2 3.1 0.0055 15.8 3.1 1.2 1 0 0 1 1 1 1 Coatomer WD associated region DUF4934 PF16288.5 ORF12339 - 0.071 13.0 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4934) PH_12 PF16457.5 ORF12339 - 0.82 10.2 3.2 2.1 8.9 0.2 2.3 1 1 1 2 2 2 0 Pleckstrin homology domain DUF1658 PF07871.11 ORF119502 - 0.17 11.9 2.2 4.9 7.3 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1658) Ion_trans PF00520.31 ORF11932 - 7e-06 25.4 9.3 7e-06 25.4 9.3 1.9 2 0 0 2 2 2 1 Ion transport protein SHP PF03579.13 ORF11932 - 3.2 7.8 8.0 3.1 7.8 1.5 3.0 2 1 1 3 3 3 0 Small hydrophobic protein Axin_b-cat_bind PF08833.10 ORF110557 - 0.11 12.7 0.8 1.1 9.4 1.5 2.3 2 0 0 2 2 2 0 Axin beta-catenin binding domain zf-RING_2 PF13639.6 ORF108838 - 1.4e-09 38.1 8.8 3.7e-09 36.8 8.8 1.7 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF108838 - 3.6e-07 30.3 6.8 3.6e-07 30.3 6.8 2.0 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF108838 - 1.1e-05 25.1 8.4 1.1e-05 25.1 8.4 3.3 4 0 0 4 4 4 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF108838 - 1.4e-05 24.8 10.0 1.4e-05 24.8 10.0 2.7 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF108838 - 1.4e-05 24.9 8.3 1.4e-05 24.9 8.3 1.9 2 0 0 2 2 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF108838 - 6.2e-05 22.9 2.2 6.2e-05 22.9 2.2 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF108838 - 0.00014 21.6 8.0 0.00063 19.5 8.1 2.0 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF108838 - 0.0003 20.3 7.9 0.00091 18.8 7.8 1.9 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type Ly49 PF08391.10 ORF108838 - 0.00031 21.1 5.4 0.00051 20.4 4.3 2.0 1 1 1 2 2 2 1 Ly49-like protein, N-terminal region FANCL_C PF11793.8 ORF108838 - 0.0012 19.0 8.4 0.0045 17.1 8.4 2.0 1 1 0 1 1 1 1 FANCL C-terminal domain Hum_adeno_E3A PF05393.11 ORF108838 - 0.0016 18.4 0.3 0.0031 17.5 0.3 1.5 1 0 0 1 1 1 1 Human adenovirus early E3A glycoprotein zf-ANAPC11 PF12861.7 ORF108838 - 0.0025 17.8 4.1 0.0059 16.6 4.1 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF108838 - 0.0031 17.3 6.8 0.0031 17.3 6.8 1.9 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) TMEM154 PF15102.6 ORF108838 - 0.0068 16.3 11.7 0.01 15.8 6.9 2.4 1 1 1 2 2 2 1 TMEM154 protein family zf-HC5HC2H_2 PF13832.6 ORF108838 - 0.01 16.0 7.7 0.025 14.8 7.7 1.6 1 1 0 1 1 1 0 PHD-zinc-finger like domain Prok-RING_4 PF14447.6 ORF108838 - 0.011 15.6 6.8 0.03 14.2 6.8 1.8 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 SUR7 PF06687.12 ORF108838 - 0.011 15.4 1.3 0.015 14.9 1.3 1.2 1 0 0 1 1 1 0 SUR7/PalI family EphA2_TM PF14575.6 ORF108838 - 0.032 15.1 0.1 0.089 13.7 0.1 1.8 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain zf-HC5HC2H PF13771.6 ORF108838 - 0.039 14.2 9.5 0.18 12.1 9.5 2.1 1 1 1 2 2 2 0 PHD-like zinc-binding domain LRRC37AB_C PF14914.6 ORF108838 - 0.049 13.5 3.7 0.041 13.8 1.9 1.8 2 0 0 2 2 2 0 LRRC37A/B like protein 1 C-terminal domain Orf78 PF06024.12 ORF108838 - 0.095 13.0 3.1 0.085 13.2 1.0 2.1 2 0 0 2 2 2 0 Orf78 (ac78) GAGA PF09237.11 ORF108838 - 0.096 12.5 0.2 0.27 11.1 0.0 1.9 2 0 0 2 2 2 0 GAGA factor Rtf2 PF04641.12 ORF108838 - 0.096 12.0 2.8 0.14 11.5 2.8 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger zf-RING-like PF08746.11 ORF108838 - 0.27 11.6 5.8 0.66 10.3 5.5 1.9 1 1 0 1 1 1 0 RING-like domain RINGv PF12906.7 ORF108838 - 0.62 10.2 12.6 0.067 13.3 8.0 1.8 2 0 0 2 2 1 0 RING-variant domain Cadherin_C_2 PF16492.5 ORF108838 - 0.73 10.6 5.3 2.1 9.1 5.3 2.0 1 1 0 1 1 1 0 Cadherin cytoplasmic C-terminal zf-C3HC4_4 PF15227.6 ORF108838 - 1.5 9.1 9.0 3.5 7.9 7.0 2.5 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING C1_2 PF03107.16 ORF108838 - 4.1 7.8 7.5 6.4 7.2 4.8 2.4 2 0 0 2 2 2 0 C1 domain Prok-RING_1 PF14446.6 ORF108838 - 4.1 7.4 12.3 0.69 9.9 3.8 2.7 3 0 0 3 3 2 0 Prokaryotic RING finger family 1 PHD PF00628.29 ORF108838 - 6.7 6.7 12.3 0.41 10.6 6.9 1.9 2 0 0 2 2 1 0 PHD-finger RPW8 PF05659.11 ORF107395 - 1.9 8.2 7.9 0.42 10.3 4.6 1.8 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Presenilin PF01080.17 ORF107395 - 6.1 5.5 5.9 8.1 5.1 5.9 1.1 1 0 0 1 1 1 0 Presenilin HEPN_AbiA_CTD PF18732.1 ORF107395 - 7.4 6.5 13.9 4.8 7.1 10.8 2.1 1 1 1 2 2 2 0 HEPN like, Abia C-terminal domain PSI_PsaF PF02507.15 ORF104512 - 4e-41 140.7 0.1 6.1e-41 140.1 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF104512 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein HlyD_D23 PF16576.5 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 1.3e-15 57.2 7.3 6.1e-14 51.7 7.2 2.2 1 1 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion HlyD_3 PF13437.6 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 2.4e-15 57.1 3.9 2.3e-12 47.6 0.2 2.3 2 0 0 2 2 2 2 HlyD family secretion protein Biotin_lipoyl_2 PF13533.6 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 3.4e-14 52.4 1.0 1.3e-09 37.7 0.4 2.8 2 0 0 2 2 2 2 Biotin-lipoyl like HlyD PF00529.20 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 3.2e-08 33.3 0.3 1.1e-07 31.6 0.3 2.0 1 1 0 1 1 1 1 HlyD membrane-fusion protein of T1SS Biotin_lipoyl PF00364.22 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 4.4e-05 23.2 0.1 0.14 12.0 0.0 2.6 2 0 0 2 2 2 2 Biotin-requiring enzyme Membrane_bind PF14564.6 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 0.038 14.4 0.3 0.088 13.3 0.2 1.6 1 1 0 1 1 1 0 Membrane binding PepSY_TM PF03929.16 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 0.076 12.7 0.7 0.13 12.0 0.6 1.5 1 1 0 1 1 1 0 PepSY-associated TM region YpmT PF17431.2 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_1 - 0.16 12.0 0.4 0.3 11.1 0.4 1.4 1 0 0 1 1 1 0 Uncharacterized YmpT-like CD225 PF04505.12 NODE_24550_length_850_cov_1232.582822_g19118_i0forward_frame_1 - 7.5 6.8 8.7 0.58 10.3 0.2 2.9 3 0 0 3 3 3 0 Interferon-induced transmembrane protein ACR_tran PF00873.19 NODE_24505_length_852_cov_3.085679_g19078_i0reverse_frame_1 - 2.2e-73 247.5 0.2 2.4e-73 247.4 0.2 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family SAM_LFY PF01698.16 NODE_24483_length_852_cov_227.621787_g19059_i0reverse_frame_1 - 0.09 12.7 0.1 0.29 11.1 0.0 1.9 2 0 0 2 2 2 0 Floricaula / Leafy protein SAM domain Adeno_PV PF03910.13 NODE_24483_length_852_cov_227.621787_g19059_i0reverse_frame_1 - 1.2 7.7 5.8 0.16 10.7 1.4 1.6 2 0 0 2 2 2 0 Adenovirus minor core protein PV FixP_N PF14715.6 NODE_24483_length_852_cov_227.621787_g19059_i0forward_frame_1 - 1.6 8.6 5.1 6.4 6.6 5.1 2.0 1 0 0 1 1 1 0 N-terminal domain of cytochrome oxidase-cbb3, FixP Wzy_C PF04932.15 NODE_24452_length_853_cov_142.224939_g19033_i0forward_frame_2 - 3.2 7.4 9.4 5.3 6.6 9.4 1.4 1 0 0 1 1 1 0 O-Antigen ligase DnaJ PF00226.31 NODE_24441_length_853_cov_310.112469_g19022_i0forward_frame_3 - 2.1e-17 63.0 0.1 4.7e-17 61.9 0.1 1.6 1 0 0 1 1 1 1 DnaJ domain Cys_Met_Meta_PP PF01053.20 NODE_24422_length_854_cov_3.357753_g19008_i0reverse_frame_3 - 0.00052 18.7 0.5 0.00078 18.1 0.5 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme RCC1_2 PF13540.6 NODE_24406_length_854_cov_134.901099_g18993_i0forward_frame_2 - 2.2e-12 46.4 16.9 0.084 12.7 1.7 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_24406_length_854_cov_134.901099_g18993_i0forward_frame_2 - 0.00062 19.9 0.6 56 3.8 0.1 4.8 4 1 1 5 5 5 0 Uncharacterised ACR, YagE family COG1723 Lipocalin_7 PF14651.6 NODE_24406_length_854_cov_134.901099_g18993_i0forward_frame_2 - 0.24 11.3 0.4 78 3.2 0.0 3.1 2 1 1 3 3 3 0 Lipocalin / cytosolic fatty-acid binding protein family PKD PF00801.20 NODE_24406_length_854_cov_134.901099_g18993_i0forward_frame_2 - 0.41 10.5 3.8 14 5.6 0.1 3.4 4 0 0 4 4 4 0 PKD domain Defensin_big PF14862.6 NODE_24369_length_855_cov_90.684146_g18966_i0reverse_frame_2 - 0.34 11.3 3.1 0.84 10.0 3.1 1.6 1 0 0 1 1 1 0 Big defensin Methyltransf_23 PF13489.6 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 1.7e-07 31.2 0.0 1.1e-06 28.5 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 2e-06 28.4 0.0 4e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 1.3e-05 25.0 0.0 1.9e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 3.1e-05 24.6 0.0 6.3e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 3.4e-05 24.5 0.0 8.1e-05 23.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 0.0032 17.1 0.1 0.0052 16.4 0.1 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TPMT PF05724.11 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 0.012 15.3 0.0 0.019 14.6 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) MTS PF05175.14 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 0.048 13.2 0.1 0.092 12.3 0.1 1.5 1 1 0 1 1 1 0 Methyltransferase small domain CMAS PF02353.20 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 0.15 11.3 0.0 0.24 10.6 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Met_10 PF02475.16 NODE_24369_length_855_cov_90.684146_g18966_i0forward_frame_2 - 0.3 10.8 0.0 0.45 10.2 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein TMEM213 PF15192.6 ORF9889 - 0.0026 17.7 0.0 0.0073 16.3 0.0 1.7 1 0 0 1 1 1 1 TMEM213 family Hexose_dehydrat PF03559.14 ORF98247 - 0.18 11.2 0.0 0.32 10.4 0.0 1.3 1 0 0 1 1 1 0 NDP-hexose 2,3-dehydratase Sec15 PF04091.12 ORF97788 - 3.7e-29 102.1 17.3 4.3e-29 101.9 17.3 1.0 1 0 0 1 1 1 1 Exocyst complex subunit Sec15-like DUF2451 PF10474.9 ORF97788 - 0.00067 19.5 9.3 0.001 18.9 9.3 1.4 1 0 0 1 1 1 1 Protein of unknown function C-terminus (DUF2451) RIX1 PF08167.12 ORF97788 - 0.0052 16.5 1.1 0.011 15.5 0.1 2.0 3 0 0 3 3 3 1 rRNA processing/ribosome biogenesis SBDS_C PF09377.10 ORF97788 - 0.017 15.1 1.7 0.035 14.1 1.7 1.7 1 1 0 1 1 1 0 SBDS protein C-terminal domain HipN PF18253.1 ORF97788 - 0.097 12.4 0.0 0.35 10.6 0.0 2.0 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain NCBP3 PF10309.9 ORF97788 - 5.5 6.9 7.1 17 5.3 0.6 3.3 3 0 0 3 3 3 0 Nuclear cap-binding protein subunit 3 ECH_1 PF00378.20 ORF91095 - 1.6e-40 139.0 0.0 6.2e-40 137.1 0.0 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF91095 - 3.7e-20 72.7 0.0 1.2e-18 67.8 0.0 2.1 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase FAM221 PF14753.6 ORF90998 - 4.5e-23 81.8 15.8 2.2e-21 76.3 15.8 2.2 1 1 0 1 1 1 1 Protein FAM221A/B BRX PF08381.11 ORF90998 - 0.017 14.4 0.0 0.036 13.4 0.0 1.5 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 Pkinase PF00069.25 ORF90547 - 3.6e-44 151.1 0.0 4.8e-44 150.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90547 - 1.4e-21 76.9 0.1 2.1e-21 76.4 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF90547 - 0.0029 17.0 0.0 0.0048 16.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF90547 - 0.017 14.5 0.0 0.023 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Haspin_kinase PF12330.8 ORF90547 - 0.028 13.4 0.1 0.038 12.9 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain FeThRed_B PF02943.15 ORF85821 - 0.05 13.6 0.0 0.37 10.8 0.0 2.1 2 0 0 2 2 2 0 Ferredoxin thioredoxin reductase catalytic beta chain UPF0061 PF02696.14 ORF83253 - 5.7e-33 114.4 0.0 7e-33 114.1 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, YdiU/UPF0061 family TetR_C_28 PF17937.1 ORF83253 - 0.0091 16.4 1.2 0.024 15.1 1.2 1.8 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks68.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks68.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks68.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks68.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:27:29 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- FAM221 PF14753.6 ORF80010 - 4.5e-23 81.8 15.8 2.2e-21 76.3 15.8 2.2 1 1 0 1 1 1 1 Protein FAM221A/B BRX PF08381.11 ORF80010 - 0.017 14.4 0.0 0.036 13.4 0.0 1.5 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 Activator-TraM PF11657.8 ORF76560 - 0.18 11.6 1.3 0.3 10.9 1.3 1.5 1 1 0 1 1 1 0 Transcriptional activator TraM Glyco_transf_11 PF01531.16 ORF76425 - 0.0085 15.3 0.0 0.012 14.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 11 PI3Ka PF00613.20 ORF74439 - 0.028 13.8 0.0 0.045 13.2 0.0 1.4 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) Sec23_helical PF04815.15 ORF74439 - 0.083 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Sec23/Sec24 helical domain PH_TFIIH PF08567.11 ORF74439 - 0.13 12.6 0.1 0.23 11.8 0.1 1.5 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain Fer4_12 PF13353.6 ORF74320 - 0.13 12.5 0.1 0.13 12.5 0.1 2.6 3 0 0 3 3 3 0 4Fe-4S single cluster domain Zip PF02535.22 ORF70391 - 9.6e-23 80.9 11.4 1.8e-16 60.3 0.8 2.6 1 1 1 2 2 2 2 ZIP Zinc transporter DUF4199 PF13858.6 ORF70391 - 0.017 15.5 1.1 0.031 14.7 1.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4199) DUF4525 PF15027.6 ORF70171 - 0.14 11.9 0.2 0.29 10.9 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) HTH_Tnp_Tc5 PF03221.16 ORF70171 - 6.5 6.9 8.5 2.8 8.0 3.3 2.7 2 1 0 2 2 2 0 Tc5 transposase DNA-binding domain Kelch_5 PF13854.6 ORF69725 - 1.7e-20 72.5 0.4 6.4e-08 32.4 0.0 3.3 3 0 0 3 3 3 3 Kelch motif Kelch_4 PF13418.6 ORF69725 - 2.9e-15 56.0 2.8 0.0017 18.3 0.1 3.3 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF69725 - 5e-15 55.2 0.2 0.0001 22.4 0.0 3.3 3 0 0 3 3 3 3 Kelch motif Kelch_1 PF01344.25 ORF69725 - 1.7e-14 53.1 0.5 0.00074 19.0 0.0 3.3 3 0 0 3 3 3 3 Kelch motif Kelch_3 PF13415.6 ORF69725 - 2.8e-14 53.0 5.8 0.0015 18.8 0.1 5.1 4 1 0 4 4 4 3 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF69725 - 3.9e-11 42.5 1.1 0.0098 15.8 0.0 3.8 3 0 0 3 3 3 3 Kelch motif PBP_N PF17093.5 ORF69725 - 0.32 11.3 3.9 0.61 10.3 3.9 1.5 1 0 0 1 1 1 0 Penicillin-binding protein N-terminus SIS PF01380.22 ORF66776 - 1.6e-36 125.0 0.1 7.4e-36 122.9 0.0 1.9 2 0 0 2 2 2 1 SIS domain CBS PF00571.28 ORF66776 - 7.3e-13 48.8 4.8 1.7e-05 25.2 0.3 3.1 3 0 0 3 3 3 2 CBS domain SIS_2 PF13580.6 ORF66776 - 0.016 15.2 0.8 0.079 13.0 0.0 2.2 1 1 1 2 2 2 0 SIS domain DUF2529 PF10740.9 ORF66776 - 0.023 14.4 0.0 0.037 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2529) WW PF00397.26 ORF65588 - 2.5e-61 203.4 50.5 4.3e-14 52.3 3.0 6.1 6 0 0 6 6 6 6 WW domain Mustang PF15682.5 ORF65588 - 3.5e-07 30.2 11.5 2 8.6 0.1 5.2 5 0 0 5 5 5 4 Musculoskeletal, temporally activated-embryonic nuclear protein 1 Iron_transport PF10634.9 ORF65588 - 0.047 13.9 0.9 75 3.5 0.0 3.8 4 0 0 4 4 4 0 Fe2+ transport protein RtxA PF07634.11 ORF65588 - 0.05 14.1 1.5 1.1e+02 3.7 0.0 4.8 5 0 0 5 5 5 0 RtxA repeat Arm-DNA-bind_1 PF09003.10 ORF65588 - 0.2 11.8 2.6 23 5.2 0.0 3.6 4 0 0 4 4 4 0 Bacteriophage lambda integrase, Arm DNA-binding domain SGL PF08450.12 ORF6437 - 2.9e-19 69.6 0.0 3.6e-19 69.3 0.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 ORF6437 - 7.3e-07 29.2 0.0 5e-06 26.5 0.0 2.5 2 1 0 2 2 2 1 Strictosidine synthase NHL PF01436.21 ORF6437 - 2.6e-05 24.0 0.1 0.65 10.1 0.1 4.2 5 0 0 5 5 5 2 NHL repeat Arylesterase PF01731.20 ORF6437 - 0.00018 21.6 0.1 0.011 15.9 0.0 3.2 2 1 1 3 3 3 1 Arylesterase Lactonase PF10282.9 ORF6437 - 0.0047 16.2 0.0 0.021 14.1 0.0 1.8 1 1 1 2 2 2 1 Lactonase, 7-bladed beta-propeller Ldl_recept_b PF00058.17 ORF6437 - 0.059 13.9 0.4 2.1 8.9 0.0 3.0 2 1 0 2 2 2 0 Low-density lipoprotein receptor repeat class B PQQ_3 PF13570.6 ORF6437 - 0.12 12.9 0.9 18 6.0 0.0 3.6 4 0 0 4 4 4 0 PQQ-like domain CAP PF00188.26 ORF63758 - 1.4e-05 25.9 0.0 3.8e-05 24.5 0.0 1.7 2 0 0 2 2 2 1 Cysteine-rich secretory protein family Thiolase_C PF02803.18 ORF62975 - 6.8e-37 125.9 0.1 1.2e-36 125.1 0.1 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain Thiolase_N PF00108.23 ORF62975 - 2.2e-33 115.7 0.0 3.4e-33 115.1 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain EMC3_TMCO1 PF01956.16 ORF56741 - 0.01 15.6 0.1 0.01 15.6 0.1 2.4 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like DUF4083 PF13314.6 ORF56741 - 0.051 13.5 0.1 0.051 13.5 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) DUF4293 PF14126.6 ORF56741 - 1.9 8.7 11.6 6.5 7.0 11.1 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4293) HpcH_HpaI PF03328.14 ORF47916 - 4.7e-64 215.5 0.1 5.4e-64 215.3 0.1 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 ORF47916 - 0.088 11.7 0.0 0.12 11.2 0.0 1.2 1 0 0 1 1 1 0 Pyruvate kinase, barrel domain F-box-like PF12937.7 ORF46624 - 0.0012 18.7 0.0 0.0024 17.7 0.0 1.5 1 0 0 1 1 1 1 F-box-like FTCD_C PF04961.12 ORF43308 - 0.062 13.1 0.6 0.16 11.8 0.6 1.7 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase APG5 PF04106.12 ORF43308 - 0.39 10.3 4.6 1.5 8.4 4.6 2.0 1 1 0 1 1 1 0 Autophagy protein Apg5 Snapin_Pallidin PF14712.6 ORF43308 - 1.2 9.6 5.5 1.8 9.1 2.6 2.4 2 0 0 2 2 2 0 Snapin/Pallidin FAM221 PF14753.6 ORF41725 - 4.5e-23 81.8 15.8 2.2e-21 76.3 15.8 2.2 1 1 0 1 1 1 1 Protein FAM221A/B BRX PF08381.11 ORF41725 - 0.017 14.4 0.0 0.036 13.4 0.0 1.5 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 Presenilin PF01080.17 ORF38663 - 1.4 7.6 5.7 1.9 7.2 5.7 1.3 1 0 0 1 1 1 0 Presenilin Pox_Ag35 PF03286.14 ORF38663 - 6.2 6.6 15.9 3.1 7.6 13.5 1.7 2 0 0 2 2 2 0 Pox virus Ag35 surface protein CENP-B_dimeris PF09026.10 ORF38663 - 6.5 7.2 13.5 2.1 8.8 4.3 2.5 2 0 0 2 2 2 0 Centromere protein B dimerisation domain FAM150 PF15129.6 ORF38663 - 7.2 6.8 8.8 3.1 8.0 5.9 1.8 2 0 0 2 2 2 0 FAM150 family DUF3090 PF11290.8 ORF3781 - 0.057 13.2 0.0 0.091 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3090) Pkinase PF00069.25 ORF35989 - 3.6e-44 151.1 0.0 4.8e-44 150.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF35989 - 1.4e-21 76.9 0.1 2.1e-21 76.4 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF35989 - 0.0029 17.0 0.0 0.0048 16.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF35989 - 0.017 14.5 0.0 0.023 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Haspin_kinase PF12330.8 ORF35989 - 0.028 13.4 0.1 0.038 12.9 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain DUF3270 PF11674.8 ORF34972 - 0.79 9.9 7.9 0.12 12.5 2.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3270) NAD_binding_11 PF14833.6 ORF34357 - 6.3e-26 91.0 0.2 9.7e-26 90.4 0.2 1.3 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NAD_binding_2 PF03446.15 ORF34357 - 1.6e-15 57.6 0.0 3.1e-15 56.7 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase DUF5010_C PF18099.1 ORF34357 - 0.15 12.2 0.0 0.44 10.7 0.0 1.7 1 0 0 1 1 1 0 DUF5010 C-terminal domain zinc_ribbon_15 PF17032.5 ORF32280 - 0.036 14.8 3.5 0.071 13.9 3.5 1.6 1 1 0 1 1 1 0 zinc-ribbon family Phage_integrase PF00589.22 ORF32280 - 0.066 13.0 0.0 0.098 12.4 0.0 1.4 1 1 0 1 1 1 0 Phage integrase family DZR PF12773.7 ORF32280 - 0.16 12.0 9.7 0.55 10.3 9.7 1.9 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 ORF32280 - 0.43 10.6 3.3 0.74 9.9 3.3 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA eIF3_subunit PF08597.10 ORF25625 - 7.7e-13 48.9 41.5 9e-13 48.7 41.5 1.1 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit MAP7 PF05672.11 ORF25625 - 0.45 10.2 39.1 0.32 10.7 28.0 2.3 2 0 0 2 2 2 0 MAP7 (E-MAP-115) family Pkinase PF00069.25 ORF23528 - 3.6e-44 151.1 0.0 4.8e-44 150.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF23528 - 1.4e-21 76.9 0.1 2.1e-21 76.4 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF23528 - 0.0029 17.0 0.0 0.0048 16.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF23528 - 0.017 14.5 0.0 0.023 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Haspin_kinase PF12330.8 ORF23528 - 0.028 13.4 0.1 0.038 12.9 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain AP_endonuc_2 PF01261.24 ORF22789 - 4.2e-33 114.6 0.0 6e-33 114.1 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel PRMT5_TIM PF17285.2 ORF22789 - 0.017 14.3 0.0 0.02 14.1 0.0 1.1 1 0 0 1 1 1 0 PRMT5 TIM barrel domain Rhabdo_NV PF02484.15 ORF22789 - 0.063 13.4 0.0 3.1 8.0 0.0 2.3 2 0 0 2 2 2 0 Rhabdovirus Non-virion protein Radical_SAM PF04055.21 ORF22789 - 0.086 13.2 0.0 3.1 8.1 0.0 2.5 2 1 0 2 2 2 0 Radical SAM superfamily DUF4862 PF16154.5 ORF22789 - 0.092 12.1 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4862) LysE PF01810.18 ORF19352 - 0.0015 18.0 1.0 0.76 9.2 0.0 2.6 3 0 0 3 3 3 2 LysE type translocator GWT1 PF06423.12 ORF19352 - 0.097 12.8 3.6 0.69 10.0 3.6 2.0 1 1 0 1 1 1 0 GWT1 MWFE PF15879.5 ORF19352 - 0.2 11.9 1.1 2.3 8.5 0.9 2.8 2 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase MWFE subunit Jagunal PF07086.12 ORF19352 - 0.28 11.2 5.4 0.087 12.9 0.6 2.2 1 1 1 2 2 2 0 Jagunal, ER re-organisation during oogenesis DUF4064 PF13273.6 ORF19352 - 1.2 9.4 10.5 1.4e+02 2.8 2.3 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) Ribosomal_L37ae PF01780.19 ORF19089 - 0.0042 17.1 4.6 0.017 15.2 4.6 2.1 1 0 0 1 1 1 1 Ribosomal L37ae protein family GldM_N PF12081.8 ORF19089 - 0.012 15.7 0.8 0.02 15.0 0.8 1.3 1 0 0 1 1 1 0 GldM N-terminal domain zf-C3HC4_2 PF13923.6 ORF19089 - 0.017 15.0 19.1 0.017 15.0 19.1 3.4 3 1 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) DnaI_N PF07319.11 ORF19089 - 0.02 15.5 1.0 0.02 15.5 1.0 2.2 1 1 1 2 2 2 0 Primosomal protein DnaI N-terminus CN_hydrolase PF00795.22 ORF18083 - 5e-58 196.5 0.0 5.6e-58 196.3 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Hexose_dehydrat PF03559.14 ORF16661 - 0.18 11.2 0.0 0.32 10.4 0.0 1.3 1 0 0 1 1 1 0 NDP-hexose 2,3-dehydratase Apolipoprotein PF01442.18 ORF16568 - 0.0012 18.7 11.5 0.0012 18.7 11.5 2.5 3 0 0 3 3 3 1 Apolipoprotein A1/A4/E domain WASH_WAHD PF11945.8 ORF16568 - 0.0057 16.2 1.5 0.0085 15.6 1.5 1.4 1 0 0 1 1 1 1 WAHD domain of WASH complex DUF724 PF05266.14 ORF16568 - 0.0096 15.8 10.6 0.059 13.2 10.2 2.3 1 1 0 1 1 1 1 Protein of unknown function (DUF724) PMEI PF04043.15 ORF16568 - 0.026 14.9 0.9 0.059 13.7 0.9 1.6 1 0 0 1 1 1 0 Plant invertase/pectin methylesterase inhibitor F_actin_bind PF08919.10 ORF16568 - 0.03 14.4 7.1 0.064 13.4 2.4 3.3 3 1 0 3 3 3 0 F-actin binding Exonuc_VII_L PF02601.15 ORF16568 - 0.033 13.7 13.2 0.083 12.4 13.2 1.6 1 1 0 1 1 1 0 Exonuclease VII, large subunit Rop-like PF05082.13 ORF16568 - 0.043 13.6 0.2 0.043 13.6 0.2 2.5 3 1 0 3 3 2 0 Rop-like DUF3053 PF11254.8 ORF16568 - 0.047 13.3 6.9 0.055 13.1 5.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3053) DUF2239 PF09998.9 ORF16568 - 0.062 13.1 2.7 0.86 9.4 0.4 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2239) DUF948 PF06103.11 ORF16568 - 0.11 12.8 3.0 0.62 10.4 2.9 2.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) POX PF07526.11 ORF16568 - 0.14 12.8 5.9 0.049 14.2 2.3 2.0 3 0 0 3 3 1 0 Associated with HOX Spc7 PF08317.11 ORF16568 - 0.14 11.0 10.5 0.042 12.7 6.5 1.9 2 0 0 2 2 2 0 Spc7 kinetochore protein Prominin PF05478.11 ORF16568 - 0.22 9.5 9.3 0.15 10.0 7.2 1.6 1 1 0 2 2 2 0 Prominin Fib_alpha PF08702.10 ORF16568 - 0.31 11.2 9.7 0.43 10.8 6.6 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 ORF16568 - 0.32 11.1 8.1 0.16 12.0 4.3 2.3 2 1 1 3 3 2 0 Protein of unknown function (DUF1664) CLZ PF16526.5 ORF16568 - 0.32 11.4 12.1 0.077 13.4 4.9 2.9 3 0 0 3 3 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Phage_GP20 PF06810.11 ORF16568 - 0.36 10.6 5.4 0.61 9.9 3.6 2.2 1 1 1 2 2 2 0 Phage minor structural protein GP20 CheZ PF04344.13 ORF16568 - 0.36 10.7 8.7 0.084 12.8 3.8 2.2 2 1 1 3 3 3 0 Chemotaxis phosphatase, CheZ Csm1_N PF18504.1 ORF16568 - 0.43 10.9 7.2 0.42 11.0 4.0 2.7 1 1 1 2 2 2 0 Csm1 N-terminal domain ApoO PF09769.9 ORF16568 - 0.44 10.5 3.5 0.47 10.4 0.9 2.4 2 1 1 3 3 3 0 Apolipoprotein O DUF16 PF01519.16 ORF16568 - 0.55 10.8 7.0 1.3 9.6 6.3 2.0 1 1 0 1 1 1 0 Protein of unknown function DUF16 TMPIT PF07851.13 ORF16568 - 0.81 8.9 7.7 1.5 8.0 7.7 1.4 1 0 0 1 1 1 0 TMPIT-like protein Fez1 PF06818.15 ORF16568 - 1.3 9.4 14.8 0.98 9.8 12.1 2.1 2 1 0 2 2 2 0 Fez1 FlaC_arch PF05377.11 ORF16568 - 1.4 9.4 8.8 5.6 7.4 1.0 3.6 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) OmpH PF03938.14 ORF16568 - 2 8.7 15.2 0.22 11.9 9.9 2.1 3 0 0 3 3 2 0 Outer membrane protein (OmpH-like) Remorin_C PF03763.13 ORF16568 - 2.2 8.2 8.6 6 6.8 6.7 2.3 1 1 1 2 2 2 0 Remorin, C-terminal region APG6_N PF17675.1 ORF16568 - 2.5 8.6 16.0 6.8 7.2 10.7 2.6 2 0 0 2 2 2 0 Apg6 coiled-coil region Gp58 PF07902.11 ORF16568 - 2.8 6.1 9.3 4.6 5.4 9.3 1.3 1 0 0 1 1 1 0 gp58-like protein HisKA_3 PF07730.13 ORF16568 - 5.6 7.6 11.3 1.1 9.8 1.4 3.6 2 1 2 4 4 4 0 Histidine kinase COG2 PF06148.11 ORF16568 - 7.1 6.7 12.7 0.53 10.4 5.7 2.6 3 1 0 3 3 2 0 COG (conserved oligomeric Golgi) complex component, COG2 BRE1 PF08647.11 ORF16568 - 8.3 6.6 14.3 0.08 13.0 5.6 2.2 3 1 0 3 3 1 0 BRE1 E3 ubiquitin ligase Abhydrolase_1 PF00561.20 ORF16025 - 0.0094 15.6 0.1 0.23 11.1 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold zf-PARP PF00645.18 ORF147948 - 6.5e-20 71.8 1.6 6.5e-20 71.8 1.6 2.4 3 0 0 3 3 3 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region PADR1 PF08063.12 ORF147948 - 2e-07 30.7 0.9 8.4e-07 28.7 0.0 2.1 2 0 0 2 2 2 1 PADR1 (NUC008) domain SAP PF02037.27 ORF147948 - 5.5e-05 22.8 0.2 0.00019 21.1 0.2 2.0 1 1 0 1 1 1 1 SAP domain Zn_Tnp_IS1595 PF12760.7 ORF147948 - 0.013 15.5 4.7 0.21 11.6 0.0 3.3 3 0 0 3 3 3 0 Transposase zinc-ribbon domain DUF4065 PF13274.6 ORF147948 - 0.041 14.8 0.6 0.13 13.2 0.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4065) HTH_38 PF13936.6 ORF147948 - 0.16 11.7 0.1 0.32 10.8 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DSPc PF00782.20 ORF146486 - 3.5e-07 30.1 0.4 3.5e-07 30.1 0.4 2.8 3 0 0 3 3 3 1 Dual specificity phosphatase, catalytic domain BPD_transp_1 PF00528.22 ORF145971 - 2.5e-14 53.4 20.8 2.5e-14 53.4 20.8 2.0 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Mad3_BUB1_I PF08311.12 ORF14391 - 0.049 13.6 0.1 0.097 12.7 0.1 1.5 1 0 0 1 1 1 0 Mad3/BUB1 homology region 1 NAD_binding_2 PF03446.15 ORF142853 - 1.3e-38 132.7 0.1 1.8e-38 132.2 0.1 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 ORF142853 - 1.9e-27 95.9 0.0 2.8e-27 95.4 0.0 1.2 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 2-Hacid_dh_C PF02826.19 ORF142853 - 0.0015 18.0 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UCR_UQCRX_QCR9 PF05365.12 ORF141307 - 9.6 6.2 10.9 5 7.2 1.6 4.1 4 1 0 4 4 4 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like SNARE PF05739.19 ORF138892 - 0.0014 18.5 0.1 0.0014 18.5 0.1 2.0 2 0 0 2 2 2 1 SNARE domain AI-2E_transport PF01594.16 ORF138892 - 0.036 13.2 0.1 0.036 13.2 0.1 1.8 2 1 1 3 3 3 0 AI-2E family transporter Arteri_GP4 PF02497.15 ORF138892 - 0.036 14.2 0.0 0.063 13.4 0.0 1.4 1 0 0 1 1 1 0 Arterivirus glycoprotein Baculo_PEP_C PF04513.12 ORF138892 - 0.049 13.7 5.7 2.5 8.1 0.3 2.3 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DASH_Dad1 PF08649.10 ORF138892 - 0.05 13.8 0.3 0.05 13.8 0.3 3.1 4 0 0 4 4 4 0 DASH complex subunit Dad1 DUF4550 PF15084.6 ORF138892 - 0.051 14.0 0.4 0.051 14.0 0.4 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4550) T3SSipB PF16535.5 ORF138892 - 0.3 11.5 5.1 0.39 11.2 0.2 2.7 2 1 1 3 3 3 0 Type III cell invasion protein SipB Spectrin PF00435.21 ORF138892 - 0.47 11.0 6.6 0.78 10.3 2.9 2.7 2 1 0 2 2 2 0 Spectrin repeat DUF2951 PF11166.8 ORF138892 - 6.4 7.1 16.2 0.11 12.8 0.9 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF2951) Orf78 PF06024.12 ORF138892 - 6.7 7.1 9.4 0.25 11.7 0.6 2.5 3 0 0 3 3 3 0 Orf78 (ac78) ETRAMP PF09716.10 ORF138892 - 7.5 6.7 10.6 84 3.3 10.6 2.7 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) DmsC PF04976.12 ORF132545 - 9.9e-116 386.0 19.9 1.1e-115 385.9 19.9 1.0 1 0 0 1 1 1 1 DMSO reductase anchor subunit (DmsC) Herpes_TK PF00693.18 ORF132545 - 0.11 11.8 0.0 0.15 11.2 0.0 1.1 1 0 0 1 1 1 0 Thymidine kinase from herpesvirus Ank_2 PF12796.7 ORF131977 - 3.9e-08 33.8 0.1 0.0028 18.2 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF131977 - 4e-07 30.2 0.6 0.044 14.3 0.1 3.6 2 1 1 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF131977 - 5.4e-06 26.6 2.4 0.51 10.7 0.0 4.2 3 1 1 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF131977 - 2.1e-05 24.5 2.3 2.8 8.8 0.0 4.5 4 2 1 5 5 5 2 Ankyrin repeat Ank_4 PF13637.6 ORF131977 - 0.01 16.4 1.7 0.77 10.4 0.0 3.7 4 1 0 4 4 4 0 Ankyrin repeats (many copies) DHO_dh PF01180.21 ORF126234 - 6.6e-07 28.8 0.0 1.1e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase DMRT-like PF15791.5 ORF126234 - 0.019 15.4 1.7 0.034 14.6 1.0 1.8 1 1 0 1 1 1 0 Doublesex-and mab-3-related transcription factor C1 and C2 DUF4572 PF15139.6 ORF118491 - 7.6e-05 22.7 0.1 0.0016 18.4 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4572) CppA_C PF14507.6 ORF11522 - 0.063 14.0 0.2 11 6.8 0.0 3.0 3 0 0 3 3 3 0 CppA C-terminal FAM221 PF14753.6 ORF109312 - 4.5e-23 81.8 15.8 2.2e-21 76.3 15.8 2.2 1 1 0 1 1 1 1 Protein FAM221A/B BRX PF08381.11 ORF109312 - 0.017 14.4 0.0 0.036 13.4 0.0 1.5 1 0 0 1 1 1 0 Transcription factor regulating root and shoot growth via Pin3 PI3Ka PF00613.20 ORF108523 - 0.028 13.8 0.0 0.045 13.2 0.0 1.4 1 0 0 1 1 1 0 Phosphoinositide 3-kinase family, accessory domain (PIK domain) Sec23_helical PF04815.15 ORF108523 - 0.083 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Sec23/Sec24 helical domain PH_TFIIH PF08567.11 ORF108523 - 0.13 12.6 0.1 0.23 11.8 0.1 1.5 1 0 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain Mit_KHE1 PF10173.9 ORF103395 - 0.89 9.6 3.3 1.2 9.1 1.9 1.9 1 1 1 2 2 2 0 Mitochondrial K+-H+ exchange-related PhnA_Zn_Ribbon PF08274.12 ORF103395 - 1.8 8.6 6.0 4.6 7.3 6.0 1.8 1 0 0 1 1 1 0 PhnA Zinc-Ribbon DUF745 PF05335.13 ORF103395 - 2.6 7.8 5.8 4.4 7.0 5.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF745) Uso1_p115_C PF04871.13 ORF103395 - 3.3 8.1 16.6 1.2 9.5 12.6 2.2 2 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region peroxidase PF00141.23 ORF10057 - 1e-28 100.6 0.0 1.5e-28 100.0 0.0 1.3 1 0 0 1 1 1 1 Peroxidase EamA PF00892.20 NODE_24653_length_848_cov_64.147601_g19204_i0forward_frame_1 - 5.5e-18 65.5 33.6 4.1e-10 40.0 13.1 2.3 2 1 0 2 2 2 2 EamA-like transporter family DUF2157 PF09925.9 NODE_24653_length_848_cov_64.147601_g19204_i0forward_frame_1 - 6.7 6.5 11.8 0.8 9.5 0.4 2.8 2 1 1 3 3 3 0 Predicted membrane protein (DUF2157) TRM13 PF05206.14 NODE_24608_length_849_cov_121.529484_g18132_i1forward_frame_1 - 4.5e-45 154.2 0.1 8.9e-23 81.1 0.1 3.0 2 1 1 3 3 3 3 Methyltransferase TRM13 Virulence_RhuM PF13310.6 NODE_24590_length_850_cov_2.919018_g19156_i0reverse_frame_2 - 0.099 11.9 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Virulence protein RhuM family Telomere_Sde2_2 PF13297.6 NODE_24589_length_850_cov_3.006135_g19155_i0reverse_frame_3 - 0.13 12.0 0.3 4.5 7.0 0.0 2.2 2 0 0 2 2 2 0 Telomere stability C-terminal EF-hand_7 PF13499.6 NODE_24589_length_850_cov_3.006135_g19155_i0reverse_frame_2 - 0.00034 21.0 5.7 0.82 10.2 0.1 3.5 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 NODE_24589_length_850_cov_3.006135_g19155_i0reverse_frame_2 - 0.00048 19.9 9.1 0.24 11.4 0.2 4.4 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 NODE_24589_length_850_cov_3.006135_g19155_i0reverse_frame_2 - 1.2 8.9 6.8 0.79 9.4 0.3 3.6 4 0 0 4 4 4 0 EF hand DUF4042 PF13251.6 NODE_24585_length_850_cov_3.400000_g19151_i0reverse_frame_3 - 4.7e-09 36.2 0.0 3.3e-05 23.7 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4042) baeRF_family7 PF18849.1 NODE_24552_length_850_cov_1010.970552_g13967_i1forward_frame_3 - 0.0049 17.1 0.0 0.0091 16.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 7 zf-CSL PF05207.13 NODE_24552_length_850_cov_1010.970552_g13967_i1forward_frame_3 - 0.05 13.3 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 CSL zinc finger GED PF02212.18 NODE_24550_length_850_cov_1232.582822_g19118_i0reverse_frame_3 - 0.17 12.1 0.1 0.29 11.3 0.1 1.3 1 0 0 1 1 1 0 Dynamin GTPase effector domain Colipase-like PF15083.6 NODE_24505_length_852_cov_3.085679_g19078_i0reverse_frame_2 - 0.019 15.1 4.0 0.019 15.1 4.0 3.0 2 2 2 4 4 4 0 Colipase-like Pentapeptide PF00805.22 ORF98203 - 1.3e-29 101.4 16.6 2.3e-09 36.7 0.5 4.3 3 1 1 4 4 4 4 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF98203 - 4.2e-20 71.7 9.2 7.1e-10 38.9 4.4 2.4 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) BTB_2 PF02214.22 ORF98203 - 4.6e-20 71.8 0.4 8e-20 71.0 0.4 1.4 1 0 0 1 1 1 1 BTB/POZ domain Pentapeptide_3 PF13576.6 ORF98203 - 1.4e-14 54.0 17.6 1.1e-07 31.8 1.9 3.8 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) BTB PF00651.31 ORF98203 - 0.084 13.1 0.2 0.19 11.9 0.2 1.6 1 0 0 1 1 1 0 BTB/POZ domain IBR PF01485.21 ORF97972 - 6.5e-05 23.1 8.0 6.5e-05 23.1 8.0 3.8 4 0 0 4 4 4 2 IBR domain, a half RING-finger domain HRI1 PF16815.5 ORF94395 - 0.16 11.7 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein HRI1 MIP-T3_C PF17749.1 ORF94323 - 8.8e-35 120.0 9.6 1.5e-34 119.2 9.6 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF94323 - 0.0037 17.5 4.4 0.019 15.2 4.4 2.1 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF94323 - 0.011 16.1 0.8 0.026 14.8 0.8 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 ORF94323 - 0.012 16.0 8.1 0.057 13.9 3.1 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 IL6 PF00489.17 ORF94323 - 0.025 14.1 0.4 0.099 12.2 0.4 1.8 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family AAA_13 PF13166.6 ORF94323 - 0.029 13.0 5.9 0.039 12.6 5.9 1.0 1 0 0 1 1 1 0 AAA domain Spidroin_MaSp PF11260.8 ORF94323 - 0.038 14.3 0.1 0.073 13.4 0.1 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Transcrip_act PF04949.13 ORF94323 - 0.05 13.5 7.6 0.39 10.6 7.6 2.2 1 1 0 1 1 1 0 Transcriptional activator DUF1664 PF07889.12 ORF94323 - 0.11 12.5 2.0 0.51 10.4 1.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF94323 - 0.18 11.9 18.0 0.14 12.3 6.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF94323 - 0.2 11.9 11.4 0.039 14.2 2.1 2.4 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain YtxH PF12732.7 ORF94323 - 0.33 11.5 4.3 3.1 8.4 2.8 2.6 2 1 0 2 2 2 0 YtxH-like protein TMF_DNA_bd PF12329.8 ORF94323 - 1.3 9.0 12.8 4.9 7.2 3.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF94323 - 1.8 7.4 12.3 0.044 12.7 4.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein MORN PF02493.20 ORF92002 - 5.3e-41 136.1 64.9 1.1e-07 31.3 1.1 9.8 10 1 0 10 10 10 8 MORN repeat EMC3_TMCO1 PF01956.16 ORF90717 - 2.1e-30 105.7 8.0 3.6e-29 101.7 8.0 2.3 1 1 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like Oxysterol_BP PF01237.18 ORF886 - 1.4e-36 126.1 3.7 1.8e-26 92.9 0.1 2.0 1 1 1 2 2 2 2 Oxysterol-binding protein Bestrophin PF01062.21 ORF84826 - 0.0066 15.9 0.0 0.0085 15.5 0.0 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel Ank_2 PF12796.7 ORF84193 - 2.5e-40 136.9 4.0 2.5e-16 60.0 0.2 4.1 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF84193 - 2.3e-30 104.6 7.9 7.7e-08 32.7 0.1 6.1 2 2 5 7 7 7 7 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF84193 - 2.8e-28 94.8 7.3 0.0029 18.0 0.0 8.2 8 0 0 8 8 8 7 Ankyrin repeat Ank PF00023.30 ORF84193 - 4.5e-25 86.9 17.5 0.0028 18.0 0.0 8.1 8 0 0 8 8 8 8 Ankyrin repeat Ank_5 PF13857.6 ORF84193 - 7.3e-21 74.0 16.2 0.0017 18.6 0.0 7.7 2 2 6 8 8 8 8 Ankyrin repeats (many copies) Ring_hydroxyl_B PF00866.18 ORF83094 - 1.1e-48 165.0 5.2 1.5e-48 164.6 5.2 1.2 1 0 0 1 1 1 1 Ring hydroxylating beta subunit AAT PF03417.16 ORF76241 - 0.21 11.3 1.4 0.38 10.4 1.2 1.7 1 1 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Fib_alpha PF08702.10 ORF76241 - 2.9 8.1 16.4 0.73 10.0 13.1 1.7 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF1499 PF07386.11 ORF74980 - 9.8e-10 39.0 0.0 2.3e-09 37.8 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1499) DUF2207 PF09972.9 ORF74980 - 0.0075 15.1 0.3 1.5 7.5 0.4 2.1 2 0 0 2 2 2 2 Predicted membrane protein (DUF2207) Sprouty PF05210.13 ORF74980 - 0.095 13.1 0.3 0.31 11.4 0.2 1.9 1 1 0 1 1 1 0 Sprouty protein (Spry) SLATT_5 PF18160.1 ORF74980 - 0.18 11.1 5.0 0.15 11.3 0.5 2.2 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 Ank_2 PF12796.7 ORF74444 - 1.6e-14 54.2 0.9 0.0015 19.1 0.1 3.6 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF74444 - 2.1e-11 43.8 5.0 0.0018 18.5 0.0 4.0 3 1 2 5 5 5 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF74444 - 2.1e-09 36.8 7.1 0.025 15.1 0.1 5.2 6 0 0 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF74444 - 3.2e-09 37.1 3.6 0.074 13.7 0.1 5.0 4 1 0 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF74444 - 4.4e-06 26.9 10.1 0.003 17.9 0.0 5.0 5 0 0 5 5 5 2 Ankyrin repeat DUF4441 PF14536.6 ORF72720 - 1.6 9.0 14.6 5.6 7.2 13.4 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4441) DAO PF01266.24 ORF68373 - 1.3e-22 80.9 0.0 1.6e-22 80.6 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 ORF68373 - 9.6e-06 25.1 0.1 0.012 14.9 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF68373 - 3.4e-05 23.2 0.0 5.8e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 ORF68373 - 0.00038 19.8 0.0 0.35 10.1 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF68373 - 0.0019 17.4 0.1 0.29 10.2 0.1 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A NAD_binding_8 PF13450.6 ORF68373 - 0.0025 18.0 0.0 0.0044 17.2 0.0 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 ORF68373 - 0.0025 17.0 0.1 0.0086 15.2 0.1 1.7 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 ORF68373 - 0.0048 15.6 0.1 0.23 10.1 0.1 2.1 2 0 0 2 2 2 1 HI0933-like protein Lycopene_cycl PF05834.12 ORF68373 - 0.009 15.1 0.4 2.4 7.1 0.1 2.1 2 0 0 2 2 2 2 Lycopene cyclase protein UDPG_MGDP_dh_N PF03721.14 ORF68373 - 0.057 13.0 0.0 0.09 12.3 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FAD_oxidored PF12831.7 ORF68373 - 0.072 12.4 0.0 0.16 11.3 0.0 1.5 1 1 1 2 2 2 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 ORF68373 - 0.18 11.1 0.0 0.32 10.3 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 ORF68373 - 0.37 10.6 0.9 1.4 8.8 0.1 2.0 2 1 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pro_isomerase PF00160.21 ORF65687 - 7.7e-45 153.0 0.2 9.3e-45 152.7 0.2 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FKBP_C PF00254.28 ORF65687 - 2.4e-05 24.6 0.0 6.3e-05 23.2 0.0 1.8 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF4441 PF14536.6 ORF64061 - 1.6 9.0 14.6 5.6 7.2 13.4 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4441) MIP-T3_C PF17749.1 ORF63016 - 8.8e-35 120.0 9.6 1.5e-34 119.2 9.6 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF63016 - 0.0037 17.5 4.4 0.019 15.2 4.4 2.1 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF63016 - 0.011 16.1 0.8 0.026 14.8 0.8 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 ORF63016 - 0.012 16.0 8.1 0.057 13.9 3.1 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 IL6 PF00489.17 ORF63016 - 0.025 14.1 0.4 0.099 12.2 0.4 1.8 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family AAA_13 PF13166.6 ORF63016 - 0.029 13.0 5.9 0.039 12.6 5.9 1.0 1 0 0 1 1 1 0 AAA domain Spidroin_MaSp PF11260.8 ORF63016 - 0.038 14.3 0.1 0.073 13.4 0.1 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Transcrip_act PF04949.13 ORF63016 - 0.05 13.5 7.6 0.39 10.6 7.6 2.2 1 1 0 1 1 1 0 Transcriptional activator DUF1664 PF07889.12 ORF63016 - 0.11 12.5 2.0 0.51 10.4 1.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF63016 - 0.18 11.9 18.0 0.14 12.3 6.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF63016 - 0.2 11.9 11.4 0.039 14.2 2.1 2.4 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain YtxH PF12732.7 ORF63016 - 0.33 11.5 4.3 3.1 8.4 2.8 2.6 2 1 0 2 2 2 0 YtxH-like protein TMF_DNA_bd PF12329.8 ORF63016 - 1.3 9.0 12.8 4.9 7.2 3.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF63016 - 1.8 7.4 12.3 0.044 12.7 4.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein Hep_59 PF07052.11 ORF62336 - 0.14 12.9 0.6 0.29 11.9 0.1 1.8 2 0 0 2 2 2 0 Hepatocellular carcinoma-associated antigen 59 DOT1 PF08123.13 ORF59962 - 2.3e-12 46.9 0.2 1.6e-11 44.1 0.2 2.0 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_32 PF13679.6 ORF59962 - 0.085 12.8 0.0 0.2 11.7 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase domain FlgH PF02107.16 ORF57247 - 0.13 11.8 0.7 0.21 11.2 0.7 1.3 1 0 0 1 1 1 0 Flagellar L-ring protein Cas_Csy1 PF09611.10 ORF54091 - 0.031 13.3 0.1 0.043 12.9 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) Mito_carr PF00153.27 ORF54038 - 3.2e-28 97.5 4.0 3e-12 46.3 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein AAA_28 PF13521.6 ORF53501 - 0.14 12.4 0.0 0.26 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain Neur_chan_memb PF02932.16 ORF52599 - 0.098 12.7 1.0 0.18 11.9 1.0 1.4 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region UPF0239 PF06783.11 ORF52599 - 0.64 10.2 7.0 1.4 9.1 7.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Ribos_L4_asso_C PF14374.6 ORF52599 - 1.6 8.8 9.5 2.5 8.2 7.1 2.2 2 1 0 2 2 2 0 60S ribosomal protein L4 C-terminal domain MAP17 PF15807.5 ORF52599 - 4.6 7.5 5.9 6.9 6.9 5.2 1.7 1 1 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 MauE PF07291.11 ORF47626 - 0.018 14.8 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 Methylamine utilisation protein MauE RRM_8 PF11835.8 ORF47626 - 0.091 13.0 0.3 25 5.2 0.0 3.1 2 1 1 3 3 3 0 RRM-like domain Act-Frag_cataly PF09192.10 ORF47479 - 3.6e-09 36.4 0.3 6.4e-09 35.6 0.3 1.5 1 1 0 1 1 1 1 Actin-fragmin kinase, catalytic Virul_fac_BrkB PF03631.15 ORF47479 - 0.16 11.5 0.0 0.92 9.1 0.0 1.9 2 0 0 2 2 2 0 Virulence factor BrkB Neur_chan_memb PF02932.16 ORF46678 - 0.098 12.7 1.0 0.18 11.9 1.0 1.4 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region UPF0239 PF06783.11 ORF46678 - 0.64 10.2 7.0 1.4 9.1 7.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Ribos_L4_asso_C PF14374.6 ORF46678 - 1.6 8.8 9.5 2.5 8.2 7.1 2.2 2 1 0 2 2 2 0 60S ribosomal protein L4 C-terminal domain MAP17 PF15807.5 ORF46678 - 4.6 7.5 5.9 6.9 6.9 5.2 1.7 1 1 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Rubredoxin PF00301.20 ORF43394 - 7.9e-10 38.6 3.7 5.9e-09 35.8 3.7 2.4 1 1 0 1 1 1 1 Rubredoxin PHD_4 PF16866.5 ORF43394 - 0.0047 17.0 1.3 0.012 15.7 1.3 1.7 1 0 0 1 1 1 1 PHD-finger Band_7 PF01145.25 ORF42741 - 2.2e-17 63.6 0.0 4.2e-17 62.7 0.0 1.4 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 ORF42741 - 0.0017 18.1 0.1 0.0028 17.4 0.1 1.3 1 0 0 1 1 1 1 SPFH domain-Band 7 family Thioredoxin_7 PF13899.6 ORF42741 - 0.072 13.3 0.0 0.21 11.8 0.0 1.8 1 0 0 1 1 1 0 Thioredoxin-like Iron_permease PF04120.12 ORF42741 - 0.17 11.7 2.7 0.36 10.6 2.7 1.5 1 0 0 1 1 1 0 Low affinity iron permease DUF1216 PF06746.11 ORF38151 - 2.6 8.0 9.4 0.29 11.1 0.3 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1216) EF-hand_6 PF13405.6 ORF37381 - 9.2e-09 34.5 0.0 0.00066 19.4 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF37381 - 2.1e-08 34.5 0.0 3.5e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF37381 - 2.5e-08 32.9 0.0 0.00026 20.3 0.0 2.4 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF37381 - 6e-08 32.4 0.0 7.9e-07 28.8 0.0 2.1 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF37381 - 2e-06 27.0 0.0 0.00011 21.5 0.0 2.3 2 0 0 2 2 2 1 EF hand CCD48 PF15799.5 ORF37381 - 0.023 13.0 0.0 0.039 12.3 0.0 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 DUF4708 PF15813.5 ORF37381 - 0.041 13.0 0.0 0.058 12.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4708) DOT1 PF08123.13 ORF36811 - 2.3e-12 46.9 0.2 1.6e-11 44.1 0.2 2.0 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_32 PF13679.6 ORF36811 - 0.083 12.9 0.0 0.2 11.7 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase domain MORN PF02493.20 ORF35744 - 0.019 14.8 6.8 3.7 7.6 0.7 3.7 3 0 0 3 3 3 0 MORN repeat Mce4_CUP1 PF11887.8 ORF35744 - 0.19 11.1 0.0 0.28 10.6 0.0 1.2 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative Ank_2 PF12796.7 ORF2356 - 4.4e-30 104.1 3.9 5.8e-15 55.6 0.1 2.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF2356 - 4.9e-23 81.2 1.4 2.7e-08 34.2 0.1 4.2 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF2356 - 9.3e-14 51.2 0.4 0.0038 17.6 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF2356 - 1.1e-13 50.0 0.0 6.7e-05 23.0 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF2356 - 1.9e-12 47.2 0.1 1.3e-08 35.0 0.1 3.4 1 1 2 3 3 3 2 Ankyrin repeats (many copies) STI1 PF17830.1 ORF2356 - 2.5e-07 30.5 2.5 7.4e-05 22.6 1.2 2.6 2 0 0 2 2 2 2 STI1 domain MHB PF16525.5 ORF2356 - 0.048 13.9 0.1 1.2 9.4 0.0 2.5 2 0 0 2 2 2 0 Haemophore, haem-binding Com_YlbF PF06133.11 ORF2356 - 0.62 10.7 6.4 1.3 9.7 3.2 2.6 2 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA MORN PF02493.20 ORF21099 - 7.2e-39 129.4 48.7 3.7e-08 32.8 3.1 8.9 8 1 0 8 8 8 8 MORN repeat Scramblase PF03803.15 ORF2097 - 1.5e-09 37.5 0.0 2.3e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Scramblase Mito_carr PF00153.27 ORF148165 - 1.2e-16 60.4 6.6 4.3e-07 29.8 0.1 3.5 3 1 0 3 3 3 3 Mitochondrial carrier protein MIP-T3_C PF17749.1 ORF145099 - 8.8e-35 120.0 9.6 1.5e-34 119.2 9.6 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF145099 - 0.0037 17.5 4.4 0.019 15.2 4.4 2.1 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF145099 - 0.011 16.1 0.8 0.026 14.8 0.8 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 ORF145099 - 0.012 16.0 8.1 0.057 13.9 3.1 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 IL6 PF00489.17 ORF145099 - 0.025 14.1 0.4 0.099 12.2 0.4 1.8 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family AAA_13 PF13166.6 ORF145099 - 0.029 13.0 5.9 0.039 12.6 5.9 1.0 1 0 0 1 1 1 0 AAA domain Spidroin_MaSp PF11260.8 ORF145099 - 0.038 14.3 0.1 0.073 13.4 0.1 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Transcrip_act PF04949.13 ORF145099 - 0.05 13.5 7.6 0.39 10.6 7.6 2.2 1 1 0 1 1 1 0 Transcriptional activator DUF1664 PF07889.12 ORF145099 - 0.11 12.5 2.0 0.51 10.4 1.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF145099 - 0.18 11.9 18.0 0.14 12.3 6.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF145099 - 0.2 11.9 11.4 0.039 14.2 2.1 2.4 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain YtxH PF12732.7 ORF145099 - 0.33 11.5 4.3 3.1 8.4 2.8 2.6 2 1 0 2 2 2 0 YtxH-like protein TMF_DNA_bd PF12329.8 ORF145099 - 1.3 9.0 12.8 4.9 7.2 3.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF145099 - 1.8 7.4 12.3 0.044 12.7 4.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein CoA_binding PF02629.19 ORF138898 - 1.9e-31 108.6 0.8 1.9e-31 108.6 0.8 2.2 2 1 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 ORF138898 - 3.4e-20 72.4 0.5 5.7e-20 71.7 0.5 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 ORF138898 - 5.4e-10 39.2 0.0 9.6e-10 38.4 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 ORF138898 - 0.00035 21.1 0.0 0.0011 19.4 0.0 1.8 2 0 0 2 2 2 1 CoA binding domain SecB PF02556.14 ORF137054 - 4.5e-57 191.9 0.1 7.7e-57 191.2 0.1 1.3 1 0 0 1 1 1 1 Preprotein translocase subunit SecB MIP-T3_C PF17749.1 ORF129231 - 8.8e-35 120.0 9.6 1.5e-34 119.2 9.6 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region Fib_alpha PF08702.10 ORF129231 - 0.0037 17.5 4.4 0.019 15.2 4.4 2.1 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 ORF129231 - 0.011 16.1 0.8 0.026 14.8 0.8 1.7 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 ORF129231 - 0.012 16.0 8.1 0.057 13.9 3.1 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 IL6 PF00489.17 ORF129231 - 0.025 14.1 0.4 0.099 12.2 0.4 1.8 1 1 1 2 2 2 0 Interleukin-6/G-CSF/MGF family AAA_13 PF13166.6 ORF129231 - 0.029 13.0 5.9 0.039 12.6 5.9 1.0 1 0 0 1 1 1 0 AAA domain Spidroin_MaSp PF11260.8 ORF129231 - 0.038 14.3 0.1 0.073 13.4 0.1 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Transcrip_act PF04949.13 ORF129231 - 0.05 13.5 7.6 0.39 10.6 7.6 2.2 1 1 0 1 1 1 0 Transcriptional activator DUF1664 PF07889.12 ORF129231 - 0.11 12.5 2.0 0.51 10.4 1.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF129231 - 0.18 11.9 18.0 0.14 12.3 6.5 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 ORF129231 - 0.2 11.9 11.4 0.039 14.2 2.1 2.4 1 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain YtxH PF12732.7 ORF129231 - 0.33 11.5 4.3 3.1 8.4 2.8 2.6 2 1 0 2 2 2 0 YtxH-like protein TMF_DNA_bd PF12329.8 ORF129231 - 1.3 9.0 12.8 4.9 7.2 3.0 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding Spc7 PF08317.11 ORF129231 - 1.8 7.4 12.3 0.044 12.7 4.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein zf-RING_2 PF13639.6 ORF113885 - 0.00014 22.1 18.5 0.00014 22.1 18.5 2.5 2 0 0 2 2 2 1 Ring finger domain zf-B_box PF00643.24 ORF113885 - 0.00017 21.7 10.9 0.00017 21.7 10.9 3.1 3 0 0 3 3 3 1 B-box zinc finger zf-C3HC4_3 PF13920.6 ORF113885 - 0.00027 20.7 16.3 0.00027 20.7 16.3 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF113885 - 0.0045 16.8 17.0 0.0045 16.8 17.0 2.4 2 0 0 2 2 2 1 RING/Ubox like zinc-binding domain tRNA-synt_1c_C PF03950.18 ORF113633 - 1e-37 129.7 0.0 1.4e-37 129.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1c PF00749.21 ORF113633 - 0.011 14.6 0.0 0.016 14.2 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain AAA_lid_3 PF17862.1 ORF108288 - 0.00053 19.7 0.0 0.00092 19.0 0.0 1.4 1 0 0 1 1 1 1 AAA+ lid domain Ank_2 PF12796.7 ORF10763 - 4.4e-30 104.1 3.9 5.8e-15 55.6 0.1 2.4 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF10763 - 4.9e-23 81.2 1.4 2.7e-08 34.2 0.1 4.2 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF10763 - 9.3e-14 51.2 0.4 0.0038 17.6 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 ORF10763 - 1.1e-13 50.0 0.0 6.7e-05 23.0 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF10763 - 1.9e-12 47.2 0.1 1.3e-08 35.0 0.1 3.4 1 1 2 3 3 3 2 Ankyrin repeats (many copies) STI1 PF17830.1 ORF10763 - 2.5e-07 30.5 2.5 7.4e-05 22.6 1.2 2.6 2 0 0 2 2 2 2 STI1 domain MHB PF16525.5 ORF10763 - 0.048 13.9 0.1 1.2 9.4 0.0 2.5 2 0 0 2 2 2 0 Haemophore, haem-binding Com_YlbF PF06133.11 ORF10763 - 0.62 10.7 6.4 1.3 9.7 3.2 2.6 2 1 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA CLIP PF12032.8 ORF105265 - 0.048 14.0 0.2 3.8 7.9 0.2 3.0 2 0 0 2 2 2 0 Regulatory CLIP domain of proteinases Pyrophosphatase PF00719.19 ORF101994 - 8.7e-36 123.1 0.1 1.2e-35 122.7 0.1 1.2 1 0 0 1 1 1 1 Inorganic pyrophosphatase Glyco_transf_8C PF08437.10 ORF101994 - 0.14 12.3 0.2 3.1 8.0 0.0 2.4 2 0 0 2 2 2 0 Glycosyl transferase family 8 C-terminal Scramblase PF03803.15 ORF101748 - 1.5e-09 37.5 0.0 2.3e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Scramblase GRIP PF01465.20 ORF101204 - 0.38 10.7 5.6 0.44 10.5 0.3 2.6 2 1 0 2 2 2 0 GRIP domain DUF3685 PF12452.8 NODE_24824_length_844_cov_67.782447_g19344_i0reverse_frame_1 - 0.2 11.3 1.6 0.37 10.5 1.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) ParD PF09386.10 NODE_24824_length_844_cov_67.782447_g19344_i0reverse_frame_1 - 2.2 8.7 6.3 3.1 8.3 0.2 3.5 2 2 1 4 4 4 0 Antitoxin ParD Nop14 PF04147.12 NODE_24793_length_844_cov_374.443758_g19254_i1reverse_frame_1 - 0.67 8.1 11.5 0.82 7.8 11.5 1.1 1 0 0 1 1 1 0 Nop14-like family NPR3 PF03666.13 NODE_24793_length_844_cov_374.443758_g19254_i1reverse_frame_1 - 7.4 5.2 6.1 9.4 4.9 6.1 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Nop14 PF04147.12 NODE_24722_length_846_cov_373.524044_g19254_i0reverse_frame_1 - 0.35 9.0 12.7 0.4 8.8 12.7 1.1 1 0 0 1 1 1 0 Nop14-like family MyTH4 PF00784.17 NODE_24686_length_847_cov_216.971675_g19227_i0reverse_frame_2 - 0.74 10.3 20.1 0.44 11.1 0.3 4.2 4 1 1 5 5 5 0 MyTH4 domain DUF3864 PF12980.7 NODE_24686_length_847_cov_216.971675_g19227_i0reverse_frame_2 - 1.3 9.4 3.5 6.1 7.2 0.1 2.5 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3864) Stc1 PF12898.7 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_3 - 2.4 8.8 9.8 17 6.0 1.3 3.8 1 1 2 3 3 3 0 Stc1 domain TspO_MBR PF03073.15 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_3 - 2.7 8.1 7.1 12 5.9 0.8 3.2 3 0 0 3 3 3 0 TspO/MBR family RCC1_2 PF13540.6 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 1.4e-07 31.1 16.8 0.22 11.4 0.1 6.0 6 0 0 6 6 6 4 Regulator of chromosome condensation (RCC1) repeat XRCC1_N PF01834.16 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 0.028 14.4 0.7 19 5.2 0.1 3.4 1 1 3 4 4 4 0 XRCC1 N terminal domain Lipocalin_7 PF14651.6 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 0.12 12.4 2.5 0.85 9.6 0.1 2.7 1 1 2 3 3 3 0 Lipocalin / cytosolic fatty-acid binding protein family Med3 PF11593.8 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 0.26 10.4 12.0 0.42 9.8 12.0 1.4 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Choline_sulf_C PF12411.8 NODE_24686_length_847_cov_216.971675_g19227_i0forward_frame_2 - 1.8 8.5 5.1 15 5.5 0.2 3.5 4 0 0 4 4 4 0 Choline sulfatase enzyme C terminal TrbL PF04610.14 NODE_24679_length_847_cov_393.834975_g18234_i1reverse_frame_3 - 0.25 11.1 20.8 0.37 10.5 20.8 1.2 1 0 0 1 1 1 0 TrbL/VirB6 plasmid conjugal transfer protein Use1 PF09753.9 NODE_24679_length_847_cov_393.834975_g18234_i1reverse_frame_3 - 0.51 10.0 1.0 0.79 9.4 1.0 1.2 1 0 0 1 1 1 0 Membrane fusion protein Use1 EMP70 PF02990.16 NODE_24679_length_847_cov_393.834975_g18234_i1reverse_frame_3 - 1.8 7.2 6.0 2.3 6.8 6.0 1.3 1 0 0 1 1 1 0 Endomembrane protein 70 DUF2070 PF09843.9 NODE_24679_length_847_cov_393.834975_g18234_i1reverse_frame_3 - 8.1 4.6 14.1 9.2 4.4 14.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) RRM_1 PF00076.22 NODE_24679_length_847_cov_393.834975_g18234_i1forward_frame_3 - 2.4e-08 33.7 0.0 6.5e-08 32.3 0.0 1.7 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 NODE_24679_length_847_cov_393.834975_g18234_i1forward_frame_3 - 0.081 12.9 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif NPR3 PF03666.13 NODE_24679_length_847_cov_393.834975_g18234_i1forward_frame_3 - 0.46 9.2 14.6 0.61 8.8 14.6 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CobT PF06213.12 NODE_24679_length_847_cov_393.834975_g18234_i1forward_frame_3 - 0.97 8.8 11.8 1.7 8.0 11.8 1.4 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT CDC45 PF02724.14 NODE_24679_length_847_cov_393.834975_g18234_i1forward_frame_3 - 3.5 5.8 14.9 4 5.6 14.9 1.1 1 0 0 1 1 1 0 CDC45-like protein Zip PF02535.22 NODE_24679_length_847_cov_393.834975_g18234_i1forward_frame_3 - 6 6.0 5.4 7.4 5.7 5.4 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Apt1 PF10351.9 NODE_24679_length_847_cov_393.834975_g18234_i1forward_frame_3 - 7.9 5.2 13.5 8.9 5.0 13.5 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain TFIIA PF03153.13 NODE_24679_length_847_cov_393.834975_g18234_i1forward_frame_2 - 0.2 11.6 15.2 0.26 11.2 15.2 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Presenilin PF01080.17 NODE_24679_length_847_cov_393.834975_g18234_i1forward_frame_2 - 4.4 6.0 9.6 5.3 5.7 9.6 1.1 1 0 0 1 1 1 0 Presenilin DUF2753 PF10952.8 NODE_24660_length_848_cov_2.592866_g19211_i0reverse_frame_3 - 0.05 13.7 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2753) Glycos_transf_2 PF00535.26 NODE_24660_length_848_cov_2.592866_g19211_i0reverse_frame_2 - 6.2e-34 117.2 0.1 8.1e-34 116.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 NODE_24660_length_848_cov_2.592866_g19211_i0reverse_frame_2 - 6.1e-15 55.7 0.0 8.5e-15 55.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 NODE_24660_length_848_cov_2.592866_g19211_i0reverse_frame_2 - 6.5e-12 45.5 0.0 1e-11 44.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 NODE_24660_length_848_cov_2.592866_g19211_i0reverse_frame_2 - 0.00045 20.7 0.1 0.0015 19.0 0.1 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 2 Rick_17kDa_Anti PF05433.15 NODE_24629_length_848_cov_644.258303_g19185_i0reverse_frame_3 - 0.038 13.8 1.4 0.038 13.8 1.4 3.5 3 0 0 3 3 3 0 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 NODE_24629_length_848_cov_644.258303_g19185_i0reverse_frame_3 - 0.047 13.7 17.7 0.58 10.2 1.0 3.4 3 0 0 3 3 3 0 Glycine zipper DUF4801 PF16059.5 NODE_24608_length_849_cov_121.529484_g18132_i1reverse_frame_2 - 0.064 13.2 1.7 0.69 9.9 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4801) DUF1275 PF06912.11 ORF9964 - 3.8e-22 79.1 11.4 3.8e-22 79.1 11.4 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1275) DEK_C PF08766.11 ORF95940 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain Viral_helicase1 PF01443.18 ORF94444 - 2.1e-06 27.7 0.2 0.00019 21.3 0.2 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase Herpes_Helicase PF02689.14 ORF94444 - 0.0064 14.5 0.0 0.009 14.0 0.0 1.1 1 0 0 1 1 1 1 Helicase AAA_30 PF13604.6 ORF94444 - 0.018 14.7 0.0 0.043 13.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain Chloroa_b-bind PF00504.21 ORF93104 - 6.7e-37 127.5 0.1 2.2e-27 96.6 0.1 2.0 1 1 1 2 2 2 2 Chlorophyll A-B binding protein DUF202 PF02656.15 ORF9050 - 1.9e-06 28.2 10.8 1.1e-05 25.8 10.8 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF202) DUF5325 PF17259.2 ORF9050 - 0.014 15.3 2.0 0.027 14.3 2.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5325) Retrotrans_gag PF03732.17 ORF9050 - 0.05 13.9 0.1 0.078 13.3 0.1 1.3 1 0 0 1 1 1 0 Retrotransposon gag protein His_Phos_1 PF00300.22 ORF88196 - 2.3e-09 37.2 0.0 5.5e-08 32.7 0.0 2.5 2 1 0 2 2 2 1 Histidine phosphatase superfamily (branch 1) COMPASS-Shg1 PF05205.12 ORF88196 - 0.13 13.0 2.8 0.32 11.7 0.5 2.3 2 1 1 3 3 3 0 COMPASS (Complex proteins associated with Set1p) component shg1 ThrE PF06738.12 ORF86456 - 1.6e-68 230.7 4.7 1.8e-68 230.5 4.7 1.0 1 0 0 1 1 1 1 Putative threonine/serine exporter ThrE_2 PF12821.7 ORF86456 - 0.00077 19.6 9.5 0.0037 17.4 9.6 1.9 1 1 0 1 1 1 1 Threonine/Serine exporter, ThrE DUF751 PF05421.11 ORF86456 - 0.095 13.4 0.3 0.5 11.1 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF751) SpoIIIAC PF06686.11 ORF86456 - 0.14 12.3 2.3 11 6.3 0.1 2.7 2 0 0 2 2 2 0 Stage III sporulation protein AC/AD protein family ECH_1 PF00378.20 ORF80459 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF80459 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF808 PF05661.12 ORF74177 - 0.27 10.3 0.0 0.4 9.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF808) zf-RING_2 PF13639.6 ORF73114 - 1.9e-08 34.5 15.5 1.9e-08 34.5 15.5 2.4 3 1 0 3 3 3 1 Ring finger domain zf-rbx1 PF12678.7 ORF73114 - 0.00048 20.4 12.3 0.0015 18.8 12.3 1.9 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF73114 - 0.002 18.1 3.9 0.006 16.6 3.9 1.8 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 ORF73114 - 0.0023 17.6 13.2 0.0023 17.6 13.2 2.8 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF73114 - 0.0044 16.8 13.0 0.0044 16.8 13.0 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF73114 - 0.0066 16.3 15.0 0.0066 16.3 15.0 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) DUF3687 PF12459.8 ORF73114 - 0.34 10.4 2.9 0.82 9.2 2.9 1.6 1 0 0 1 1 1 0 D-Ala-teichoic acid biosynthesis protein 7tm_1 PF00001.21 ORF69774 - 0.0091 15.3 3.5 1.1 8.5 0.3 2.1 1 1 1 2 2 2 2 7 transmembrane receptor (rhodopsin family) Connexin PF00029.19 ORF69774 - 0.058 13.2 0.8 0.17 11.6 0.6 2.0 1 1 1 2 2 2 0 Connexin MIG-14_Wnt-bd PF06664.12 ORF69774 - 0.15 11.2 15.2 0.066 12.4 1.7 2.1 1 1 0 2 2 2 0 Wnt-binding factor required for Wnt secretion DUF4064 PF13273.6 ORF69774 - 0.17 12.2 12.3 0.18 12.1 3.0 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) Zip PF02535.22 ORF69774 - 0.87 8.7 4.6 0.73 9.0 2.7 1.9 1 1 1 2 2 2 0 ZIP Zinc transporter Asp PF00026.23 ORF68809 - 2.4e-32 112.6 3.0 2.8e-32 112.4 3.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF68809 - 6.1e-06 26.6 0.4 2.7e-05 24.5 0.1 1.9 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal FAM165 PF14981.6 ORF68809 - 0.16 11.8 0.1 0.27 11.0 0.1 1.4 1 0 0 1 1 1 0 FAM165 family DNA_pol_A PF00476.20 ORF68755 - 5.2e-129 430.6 0.1 5.8e-129 430.4 0.1 1.0 1 0 0 1 1 1 1 DNA polymerase family A DUF4189 PF13827.6 ORF68237 - 0.36 11.4 4.9 0.81 10.3 4.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4189) Laminin_B PF00052.18 ORF67360 - 1.6e-05 24.8 0.0 2.8e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Laminin B (Domain IV) Macro PF01661.21 ORF64735 - 1.2e-30 105.9 0.3 2.7e-30 104.8 0.3 1.6 1 0 0 1 1 1 1 Macro domain DUF3783 PF12646.7 ORF64735 - 0.011 15.6 1.4 0.66 10.0 0.1 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF3783) zf-CCCH_7 PF18586.1 ORF64735 - 0.098 13.0 0.4 0.27 11.6 0.4 1.7 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 Serine_rich PF08824.10 ORF64735 - 0.13 12.3 0.9 0.24 11.4 0.2 1.8 2 0 0 2 2 2 0 Serine rich protein interaction domain SCVP PF17619.2 ORF64735 - 5.4 7.9 8.8 2.4 9.1 0.4 3.0 4 0 0 4 4 4 0 Secreted clade V proteins FKBP_N PF01346.18 ORF64735 - 5.6 8.0 10.6 0.97 10.4 0.2 3.5 3 1 1 4 4 4 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DHHC PF01529.20 ORF62746 - 1.4e-30 106.1 17.1 1.4e-30 106.1 17.1 1.6 2 0 0 2 2 2 1 DHHC palmitoyltransferase Spt4 PF06093.13 ORF62746 - 0.39 10.9 7.3 1.3 9.2 7.3 1.9 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger SAYSvFN PF10260.9 ORF62746 - 3.7 7.5 6.0 1.4 8.9 2.8 1.8 2 0 0 2 2 2 0 Uncharacterized conserved domain (SAYSvFN) Ldl_recept_a PF00057.18 ORF62290 - 2e-11 43.9 26.5 1.2e-06 28.6 7.1 2.5 2 0 0 2 2 2 2 Low-density lipoprotein receptor domain class A HMG14_17 PF01101.18 ORF59480 - 0.01 16.8 15.2 0.01 16.8 15.2 2.4 2 0 0 2 2 2 0 HMG14 and HMG17 DEK_C PF08766.11 ORF57821 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain Oxidored_molyb PF00174.19 ORF5631 - 8.1e-16 58.1 0.0 1.5e-15 57.2 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 ORF5631 - 2e-11 44.1 0.0 3.9e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain ECH_1 PF00378.20 ORF55641 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF55641 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase EF-hand_7 PF13499.6 ORF55027 - 0.015 15.7 0.8 0.65 10.5 0.0 2.8 2 1 1 3 3 3 0 EF-hand domain pair ArsR PF09824.9 ORF55027 - 0.037 13.6 0.2 0.066 12.8 0.2 1.3 1 0 0 1 1 1 0 ArsR transcriptional regulator EF-hand_1 PF00036.32 ORF55027 - 0.038 13.6 0.1 0.31 10.7 0.0 2.3 2 0 0 2 2 2 0 EF hand SNO PF01174.19 ORF55027 - 0.083 12.7 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 SNO glutamine amidotransferase family RCC1_2 PF13540.6 ORF54524 - 1e-12 47.5 17.1 0.04 13.7 0.1 6.9 5 1 1 6 6 6 5 Regulator of chromosome condensation (RCC1) repeat bPH_6 PF10756.9 ORF54524 - 0.17 12.0 3.1 16 5.6 0.1 3.3 4 0 0 4 4 4 0 Bacterial PH domain Pirin PF02678.16 ORF53676 - 2.2e-27 95.2 0.5 3.4e-27 94.6 0.5 1.2 1 0 0 1 1 1 1 Pirin Pirin_C_2 PF17954.1 ORF53676 - 1.6e-10 41.1 0.0 4e-10 39.7 0.0 1.7 2 0 0 2 2 2 1 Quercetinase C-terminal cupin domain Cupin_2 PF07883.11 ORF53676 - 1.1e-06 28.3 0.1 1.1e-05 25.1 0.2 2.1 2 0 0 2 2 2 1 Cupin domain AMPK1_CBM PF16561.5 ORF53676 - 0.019 15.2 0.0 4 7.7 0.0 2.7 2 1 1 3 3 3 0 Glycogen recognition site of AMP-activated protein kinase LMBR1 PF04791.16 ORF4886 - 0.46 9.3 13.6 0.61 8.9 13.6 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein TMPIT PF07851.13 ORF4886 - 2.6 7.2 16.8 4.5 6.4 1.8 2.2 2 0 0 2 2 2 0 TMPIT-like protein Occludin_ELL PF07303.13 ORF4886 - 5.7 7.7 17.7 0.67 10.7 3.9 2.9 1 1 2 3 3 3 0 Occludin homology domain TolA_bind_tri PF16331.5 ORF4886 - 5.9 7.0 11.7 1.4 9.0 0.9 2.8 2 1 0 2 2 2 0 TolA binding protein trimerisation ECH_1 PF00378.20 ORF48209 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF48209 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF1275 PF06912.11 ORF45506 - 3.8e-22 79.1 11.4 3.8e-22 79.1 11.4 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1275) Porphobil_deam PF01379.20 ORF44829 - 2.5e-51 174.1 0.0 6.4e-51 172.8 0.0 1.6 2 0 0 2 2 2 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 ORF44829 - 5.7e-10 39.4 0.0 2.3e-09 37.5 0.0 1.9 1 1 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain LemA PF04011.12 ORF44829 - 0.12 12.2 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 LemA family CBM_5_12_2 PF14600.6 ORF44829 - 0.19 11.7 0.0 24 4.9 0.0 2.2 2 0 0 2 2 2 0 Cellulose-binding domain Sulfotransfer_4 PF17784.1 ORF42787 - 1.4e-53 181.9 0.0 1.8e-53 181.6 0.0 1.1 1 0 0 1 1 1 1 Sulfotransferase domain Sulfotransfer_3 PF13469.6 ORF42787 - 1.7e-06 28.6 4.1 0.0019 18.6 0.5 2.4 1 1 1 2 2 2 2 Sulfotransferase family Sulfotransfer_1 PF00685.27 ORF42787 - 0.00054 19.5 0.0 0.00081 18.9 0.0 1.3 1 0 0 1 1 1 1 Sulfotransferase domain Act-Frag_cataly PF09192.10 ORF4196 - 5.1e-12 45.8 0.0 7.3e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 Actin-fragmin kinase, catalytic ECH_1 PF00378.20 ORF35417 - 1.4e-36 126.1 0.3 5.8e-36 124.1 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF35417 - 5.5e-23 82.0 0.2 9.3e-23 81.2 0.2 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DEK_C PF08766.11 ORF34102 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks69.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks69.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks69.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks69.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Dynein_C PF18199.1 ORF89506 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF89506 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF89506 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF47593 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF47593 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF47593 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain PIP5K PF01504.18 ORF26781 - 8.4e-65 218.7 6.5 8.4e-65 218.7 6.5 2.0 2 0 0 2 2 2 1 Phosphatidylinositol-4-phosphate 5-Kinase EF-hand_7 PF13499.6 ORF26781 - 4.3e-10 39.9 13.3 1.8e-06 28.3 0.4 5.3 3 1 2 5 5 5 3 EF-hand domain pair EF-hand_1 PF00036.32 ORF26781 - 0.0078 15.7 17.1 0.12 12.0 0.0 5.6 6 0 0 6 6 6 2 EF hand DUF5327 PF17261.2 ORF26781 - 1.9 9.3 7.4 0.74 10.6 4.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5327) DUF4482 PF14818.6 ORF26781 - 4 8.3 8.5 0.6 11.0 4.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4482) Dynein_C PF18199.1 ORF152092 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF152092 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF152092 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain NCD2 PF04905.13 ORF14759 - 0.011 15.7 1.8 0.011 15.7 1.8 2.3 2 0 0 2 2 2 0 NAB conserved region 2 (NCD2) Dynein_C PF18199.1 ORF13804 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF13804 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF13804 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF132372 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF132372 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF132372 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF122090 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF122090 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF122090 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 ORF1160 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF1160 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF1160 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain PhoLip_ATPase_C PF16212.5 ORF108572 - 3.5e-45 154.7 28.1 3.5e-45 154.7 28.1 2.1 2 0 0 2 2 2 1 Phospholipid-translocating P-type ATPase C-terminal Cation_ATPase PF13246.6 ORF108572 - 1.4e-14 53.9 0.1 2.4e-13 50.0 0.0 2.4 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 ORF108572 - 2.5e-12 47.5 0.4 2.9e-07 31.0 0.4 3.0 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 ORF108572 - 0.0035 16.9 0.3 0.0035 16.9 0.3 2.8 4 0 0 4 4 4 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF108572 - 0.009 15.8 0.3 0.037 13.8 0.3 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Dynein_C PF18199.1 ORF106453 - 2e-86 290.0 0.2 3.1e-86 289.4 0.2 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF106453 - 9.9e-56 188.1 0.1 1.8e-55 187.2 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF106453 - 1e-41 141.8 0.5 4.9e-41 139.5 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Sortilin-Vps10 PF15902.5 ORF84864 - 1.6e-95 320.5 5.8 2.1e-95 320.1 5.8 1.2 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, Sortilin_C PF15901.5 ORF84864 - 4.7e-39 134.5 4.4 7.6e-39 133.8 4.4 1.4 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal BNR PF02012.20 ORF84864 - 0.35 11.0 20.1 20 5.7 0.4 6.4 6 0 0 6 6 6 0 BNR/Asp-box repeat Thioredoxin PF00085.20 ORF53723 - 0.013 15.5 0.1 0.03 14.3 0.1 1.6 1 0 0 1 1 1 0 Thioredoxin zf-RING_2 PF13639.6 ORF121461 - 3.1e-09 37.0 6.1 3.1e-09 37.0 6.1 3.6 4 0 0 4 4 3 1 Ring finger domain zf-RING_11 PF17123.5 ORF121461 - 4.1e-09 36.0 4.7 4.1e-09 36.0 4.7 3.1 4 0 0 4 4 4 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF121461 - 1e-06 28.5 8.5 1e-06 28.5 8.5 2.6 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF121461 - 0.00017 21.5 7.7 0.00017 21.5 7.7 2.8 2 1 0 2 2 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF121461 - 0.0006 19.8 3.5 0.0006 19.8 3.5 2.6 2 1 1 3 3 3 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF121461 - 0.00075 19.3 6.3 0.00075 19.3 6.3 2.6 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF121461 - 0.00092 19.2 1.0 0.0038 17.3 1.0 2.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 ORF121461 - 0.00098 18.9 6.0 0.00098 18.9 6.0 2.6 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF121461 - 0.0021 18.3 6.0 0.0021 18.3 6.0 2.9 2 1 1 3 3 2 1 RING-H2 zinc finger domain Prok-RING_4 PF14447.6 ORF121461 - 0.0033 17.2 5.3 0.0033 17.2 5.3 2.7 3 0 0 3 3 2 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF121461 - 0.0079 15.8 7.1 0.12 12.0 7.3 2.8 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF121461 - 0.018 15.2 4.8 0.018 15.2 4.8 2.1 2 0 0 2 2 1 0 FANCL C-terminal domain Orf78 PF06024.12 ORF121461 - 0.057 13.7 0.1 0.2 12.0 0.1 1.9 1 0 0 1 1 1 0 Orf78 (ac78) MG1 PF17790.1 ORF121461 - 1 9.8 4.0 0.77 10.2 0.1 2.5 2 0 0 2 2 2 0 Macroglobulin domain MG1 CD36 PF01130.21 ORF44009 - 2.1e-28 99.1 5.3 3e-28 98.6 5.3 1.2 1 0 0 1 1 1 1 CD36 family DUF2500 PF10694.9 ORF44009 - 0.087 13.3 0.6 0.22 12.0 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2500) LRR_8 PF13855.6 ORF141346 - 1.1e-50 169.2 81.4 6e-10 38.7 4.8 7.9 6 2 0 7 7 7 7 Leucine rich repeat LRR_4 PF12799.7 ORF141346 - 7.4e-40 134.3 92.8 7e-08 32.7 6.2 11.6 5 4 7 13 13 13 12 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF141346 - 1.2e-10 41.2 37.0 0.0024 17.4 2.9 5.3 2 2 3 5 5 5 5 Leucine-rich repeat LRR_1 PF00560.33 ORF141346 - 3.9e-09 35.8 60.5 2.5 9.0 1.2 16.1 16 1 0 16 16 16 5 Leucine Rich Repeat LRR_5 PF13306.6 ORF141346 - 0.00095 19.1 22.2 0.049 13.6 2.3 5.1 2 2 2 5 5 5 4 BspA type Leucine rich repeat region (6 copies) LRR_6 PF13516.6 ORF141346 - 2 8.7 79.8 0.73 10.0 0.1 13.9 16 0 0 16 16 16 0 Leucine Rich repeat Beta_helix PF13229.6 ORF141346 - 3.7 7.4 9.0 1.5 8.6 0.7 2.7 2 0 0 2 2 2 0 Right handed beta helix region PHM7_cyt PF14703.6 ORF141069 - 3.5e-27 95.8 1.5 6.6e-27 94.9 0.8 1.9 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter RSN1_7TM PF02714.15 ORF141069 - 1.7e-26 93.2 30.6 1.4e-25 90.2 29.6 2.5 1 1 1 2 2 2 1 Calcium-dependent channel, 7TM region, putative phosphate RSN1_TM PF13967.6 ORF141069 - 2.1e-19 69.8 0.1 2.1e-19 69.8 0.1 3.9 4 0 0 4 4 4 1 Late exocytosis, associated with Golgi transport UPF0242 PF06785.11 ORF141069 - 0.0079 16.3 0.8 5.3 7.1 0.0 3.6 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0242) N-terminus SIT PF15330.6 ORF141069 - 0.01 16.3 0.4 13 6.2 0.0 3.4 3 0 0 3 3 3 0 SHP2-interacting transmembrane adaptor protein, SIT WBP-1 PF11669.8 ORF141069 - 0.011 16.3 2.0 9.1 7.0 0.0 3.8 3 0 0 3 3 3 0 WW domain-binding protein 1 Pkinase PF00069.25 ORF69298 - 2.6e-76 256.5 0.0 8.7e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF69298 - 6e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF69298 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF69298 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF69298 - 8.2e-06 25.0 13.9 0.0094 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF69298 - 9.2e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF69298 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF69298 - 0.0084 16.5 13.9 0.24 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF69298 - 0.22 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF69298 - 0.43 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand DHC_N2 PF08393.13 ORF63167 - 1.1e-60 205.9 0.1 1.1e-60 205.9 0.1 1.9 2 1 0 2 2 2 1 Dynein heavy chain, N-terminal region 2 PCI PF01399.27 ORF63167 - 0.039 14.5 0.4 0.039 14.5 0.4 2.9 4 0 0 4 4 4 0 PCI domain PHM7_cyt PF14703.6 ORF63167 - 0.12 12.6 1.0 2.9 8.1 0.0 2.8 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter zf-RING_9 PF13901.6 ORF63167 - 6.2 6.7 10.3 0.12 12.3 0.9 3.0 4 1 0 4 4 4 0 Putative zinc-RING and/or ribbon Pkinase PF00069.25 ORF143584 - 2.6e-76 256.5 0.0 8.7e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF143584 - 6e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF143584 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF143584 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF143584 - 8.2e-06 25.0 13.9 0.0094 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF143584 - 9.2e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF143584 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF143584 - 0.0084 16.5 13.9 0.24 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF143584 - 0.22 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF143584 - 0.43 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand DHC_N2 PF08393.13 ORF11172 - 1.1e-60 205.9 0.1 1.1e-60 205.9 0.1 1.9 2 1 0 2 2 2 1 Dynein heavy chain, N-terminal region 2 PCI PF01399.27 ORF11172 - 0.039 14.5 0.4 0.039 14.5 0.4 2.9 4 0 0 4 4 4 0 PCI domain PHM7_cyt PF14703.6 ORF11172 - 0.12 12.6 1.0 2.9 8.1 0.0 2.8 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter zf-RING_9 PF13901.6 ORF11172 - 6.2 6.7 10.3 0.12 12.3 0.9 3.0 4 1 0 4 4 4 0 Putative zinc-RING and/or ribbon Pkinase PF00069.25 ORF99401 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF99401 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF99401 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF99401 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF99401 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF99401 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF99401 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF99401 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF99401 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF99401 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF98533 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF98533 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF98533 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF98533 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF98533 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF98533 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF98533 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF98533 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF98533 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF98533 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF90471 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF90471 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF90471 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF90471 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF90471 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF90471 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF90471 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF90471 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF90471 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF90471 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF89375 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF89375 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF89375 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF89375 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF89375 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF89375 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF89375 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF89375 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF89375 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF89375 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF82728 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82728 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF82728 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF82728 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF82728 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF82728 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF82728 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF82728 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF82728 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF82728 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF81088 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF81088 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF81088 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF81088 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF81088 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF81088 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF81088 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF81088 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF81088 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF81088 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF72677 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF72677 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF72677 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF72677 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF72677 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF72677 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF72677 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF72677 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF72677 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF72677 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF61831 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF61831 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF61831 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF61831 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF61831 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF61831 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF61831 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF61831 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF61831 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF61831 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF61638 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF61638 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF61638 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF61638 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF61638 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF61638 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF61638 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF61638 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF61638 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF61638 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF57282 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF57282 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF57282 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF57282 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF57282 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF57282 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF57282 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF57282 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF57282 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF57282 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF33169 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF33169 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF33169 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF33169 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF33169 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF33169 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF33169 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF33169 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF33169 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF33169 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF28813 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF28813 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF28813 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF28813 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF28813 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF28813 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF28813 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF28813 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF28813 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF28813 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF24333 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24333 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF24333 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF24333 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF24333 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF24333 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF24333 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF24333 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF24333 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF24333 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF15749 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF15749 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF15749 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF15749 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF15749 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF15749 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF15749 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF15749 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF15749 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF15749 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF151191 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF151191 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF151191 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF151191 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF151191 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF151191 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF151191 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF151191 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF151191 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF151191 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF148108 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF148108 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF148108 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF148108 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF148108 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF148108 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF148108 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF148108 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF148108 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF148108 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand ASH PF15780.5 ORF146946 - 3.4e-10 40.0 0.0 0.00016 21.8 0.0 2.9 3 0 0 3 3 3 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Motile_Sperm PF00635.26 ORF146946 - 1.6e-05 24.7 0.1 0.093 12.6 0.0 3.1 3 0 0 3 3 3 2 MSP (Major sperm protein) domain TMEM131_like PF12371.8 ORF146946 - 0.0018 18.5 0.2 0.049 13.9 0.0 2.8 3 0 0 3 3 3 1 Transmembrane protein 131-like PapD-like PF14874.6 ORF146946 - 0.014 15.5 0.0 0.044 13.9 0.0 1.8 2 0 0 2 2 2 0 Flagellar-associated PapD-like Pkinase PF00069.25 ORF138987 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF138987 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF138987 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF138987 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF138987 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF138987 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF138987 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF138987 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF138987 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF138987 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF137720 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF137720 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF137720 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF137720 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF137720 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF137720 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF137720 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF137720 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF137720 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF137720 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF13670 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF13670 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF13670 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF13670 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF13670 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF13670 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF13670 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF13670 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF13670 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF13670 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF132029 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF132029 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF132029 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF132029 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF132029 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF132029 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF132029 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF132029 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF132029 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF132029 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF128088 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF128088 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF128088 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF128088 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF128088 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF128088 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF128088 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF128088 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF128088 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF128088 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF124686 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF124686 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF124686 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF124686 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF124686 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF124686 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF124686 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF124686 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF124686 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF124686 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF115220 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF115220 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF115220 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF115220 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF115220 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF115220 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF115220 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF115220 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF115220 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF115220 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF108955 - 2.6e-76 256.5 0.0 8.6e-76 254.8 0.0 1.9 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF108955 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF108955 - 4.5e-09 36.8 1.0 2e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF108955 - 7e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF108955 - 8.2e-06 25.0 13.9 0.0093 15.4 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF108955 - 9.1e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF108955 - 0.0043 16.4 0.0 0.049 12.9 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF108955 - 0.0082 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF108955 - 0.21 11.4 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF108955 - 0.42 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand Peptidase_C2 PF00648.21 ORF95142 - 1e-62 211.8 2.5 1.7e-62 211.1 2.5 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease DUF3126 PF11324.8 ORF95142 - 0.018 14.8 0.0 0.044 13.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3126) MATH PF00917.26 ORF95142 - 5.5 7.2 10.5 0.1 12.8 0.7 3.0 4 0 0 4 4 4 0 MATH domain PFL-like PF02901.15 ORF26752 - 3.9e-207 689.9 0.0 4.8e-207 689.6 0.0 1.0 1 0 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 ORF26752 - 7.5e-31 106.8 0.0 2.5e-30 105.1 0.0 2.0 1 0 0 1 1 1 1 Glycine radical DUF3029 PF11230.8 ORF26752 - 0.018 13.4 0.0 0.29 9.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3029) Ephrin_rec_like PF07699.13 ORF107921 - 0.0036 17.0 3.6 0.0036 17.0 3.6 2.8 2 0 0 2 2 2 1 Putative ephrin-receptor like Auxin_canalis PF05703.11 ORF107921 - 5.6 6.8 6.0 9 6.1 6.0 1.3 1 0 0 1 1 1 0 Auxin canalisation zf-RING_2 PF13639.6 ORF107125 - 5.2e-09 36.3 7.7 5.2e-09 36.3 7.7 3.4 4 0 0 4 4 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF107125 - 4.4e-08 32.7 10.3 6.3e-08 32.2 6.6 2.8 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF107125 - 2.2e-06 27.5 7.4 2.2e-06 27.5 7.4 3.3 4 0 0 4 4 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF107125 - 9.2e-05 22.3 7.7 9.2e-05 22.3 7.7 3.2 3 0 0 3 3 2 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF107125 - 0.00012 21.8 6.1 0.00053 19.8 6.1 2.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF107125 - 0.0002 21.3 3.9 0.0002 21.3 3.9 2.3 2 0 0 2 2 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF107125 - 0.00032 20.9 4.7 0.00032 20.9 4.7 2.5 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF107125 - 0.0022 18.0 1.7 0.0067 16.4 1.7 1.9 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Rax2 PF12768.7 ORF107125 - 0.0029 17.1 0.1 0.0065 15.9 0.1 1.5 1 0 0 1 1 1 1 Cortical protein marker for cell polarity MAP17 PF15807.5 ORF107125 - 0.0035 17.6 0.0 0.0074 16.5 0.0 1.4 1 0 0 1 1 1 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Protocadherin PF08374.11 ORF107125 - 0.011 15.8 0.1 0.023 14.7 0.1 1.5 1 0 0 1 1 1 0 Protocadherin EphA2_TM PF14575.6 ORF107125 - 0.013 16.4 0.1 0.058 14.3 0.1 2.1 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain zf-Nse PF11789.8 ORF107125 - 0.042 13.7 5.1 0.12 12.2 5.1 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit LRR19-TM PF15176.6 ORF107125 - 0.064 13.2 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain Zn_ribbon_17 PF17120.5 ORF107125 - 6.9 6.4 13.4 0.14 11.8 5.4 2.5 2 0 0 2 2 1 0 Zinc-ribbon, C4HC2 type HEAT PF02985.22 ORF64822 - 1e-12 47.1 3.7 1.5 9.3 0.0 9.7 10 0 0 10 10 10 2 HEAT repeat HEAT_2 PF13646.6 ORF64822 - 7.6e-11 42.3 1.7 0.097 13.1 0.0 7.1 5 1 1 7 7 7 3 HEAT repeats Cnd1 PF12717.7 ORF64822 - 1.2e-09 38.4 7.5 0.39 10.7 0.2 6.6 5 1 1 6 6 6 4 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 ORF64822 - 2.7e-09 37.3 0.0 0.45 11.1 0.0 7.6 8 0 0 8 8 8 1 HEAT-like repeat Adaptin_N PF01602.20 ORF64822 - 2.1e-08 33.2 2.1 0.0029 16.3 1.6 3.5 2 2 0 2 2 2 2 Adaptin N terminal region Vac14_Fab1_bd PF12755.7 ORF64822 - 0.0048 17.5 1.5 1.7 9.3 0.0 4.6 5 0 0 5 5 5 1 Vacuolar 14 Fab1-binding region NUC173 PF08161.12 ORF64822 - 0.042 13.5 0.1 7.2 6.2 0.0 4.2 3 2 2 5 5 5 0 NUC173 domain Arm PF00514.23 ORF64822 - 0.13 12.4 0.4 24 5.2 0.0 4.2 4 1 0 4 4 4 0 Armadillo/beta-catenin-like repeat PHM7_cyt PF14703.6 ORF48090 - 2.4e-16 60.5 1.9 2.4e-16 60.5 1.9 1.8 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter Anoctamin PF04547.12 ORF48090 - 2.3e-07 30.0 7.3 3.7e-07 29.4 4.2 2.2 2 0 0 2 2 2 1 Calcium-activated chloride channel RRM_1 PF00076.22 ORF48090 - 5.4e-05 22.9 0.1 0.041 13.7 0.0 2.6 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nha1_C PF08619.10 ORF48090 - 0.071 12.3 12.2 0.1 11.8 12.2 1.2 1 0 0 1 1 1 0 Alkali metal cation/H+ antiporter Nha1 C terminus Astro_capsid_p PF12226.8 ORF48090 - 2.7 7.1 13.8 5.2 6.1 13.8 1.4 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF898 PF05987.13 ORF48090 - 4.3 6.3 13.3 1.6 7.7 4.8 3.0 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF898) Glyco_hydro_2_C PF02836.17 ORF23514 - 2.9e-57 194.1 0.4 4.1e-57 193.6 0.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain Bgal_small_N PF02929.17 ORF23514 - 3.8e-49 167.5 0.0 1.5e-39 136.1 0.0 2.4 2 0 0 2 2 2 2 Beta galactosidase small chain DUF4981 PF16353.5 ORF23514 - 1e-16 61.2 0.0 2.5e-16 59.9 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function(DUF4981) DUF4215 PF13948.6 ORF150171 - 1.8e-16 60.3 35.6 2.2e-05 24.8 5.4 3.5 3 0 0 3 3 3 3 Domain of unknown function (DUF4215) RNA_pol_Rpc4 PF05132.14 ORF150171 - 0.038 14.4 2.1 0.11 13.0 2.1 1.7 1 1 0 1 1 1 0 RNA polymerase III RPC4 Zip PF02535.22 ORF150171 - 0.057 12.6 0.1 0.057 12.6 0.1 1.9 3 0 0 3 3 3 0 ZIP Zinc transporter Oxidored_q2 PF00420.24 ORF150171 - 0.89 9.2 5.6 0.12 12.1 0.2 2.3 2 1 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tim54 PF11711.8 ORF150171 - 1.2 7.8 11.1 1.9 7.2 11.1 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DPM3 PF08285.11 ORF150171 - 1.4 9.2 7.6 0.36 11.1 0.8 2.8 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Vfa1 PF08432.10 ORF150171 - 1.4 9.2 12.0 2.2 8.6 12.0 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 ZZ PF00569.17 ORF150171 - 1.7 8.5 12.5 0.61 9.9 0.2 3.9 4 0 0 4 4 4 0 Zinc finger, ZZ type CDC45 PF02724.14 ORF150171 - 1.9 6.7 7.5 2.7 6.2 7.5 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF4215 PF13948.6 ORF136705 - 1.8e-16 60.3 35.6 2.2e-05 24.8 5.4 3.5 3 0 0 3 3 3 3 Domain of unknown function (DUF4215) RNA_pol_Rpc4 PF05132.14 ORF136705 - 0.038 14.4 2.1 0.11 13.0 2.1 1.7 1 1 0 1 1 1 0 RNA polymerase III RPC4 Zip PF02535.22 ORF136705 - 0.057 12.6 0.1 0.057 12.6 0.1 1.9 3 0 0 3 3 3 0 ZIP Zinc transporter Oxidored_q2 PF00420.24 ORF136705 - 0.89 9.2 5.6 0.12 12.1 0.2 2.3 2 1 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tim54 PF11711.8 ORF136705 - 1.2 7.8 11.1 1.9 7.2 11.1 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DPM3 PF08285.11 ORF136705 - 1.4 9.2 7.6 0.36 11.1 0.8 2.8 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Vfa1 PF08432.10 ORF136705 - 1.4 9.2 12.0 2.2 8.6 12.0 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 ZZ PF00569.17 ORF136705 - 1.7 8.5 12.5 0.61 9.9 0.2 3.9 4 0 0 4 4 4 0 Zinc finger, ZZ type CDC45 PF02724.14 ORF136705 - 1.9 6.7 7.5 2.7 6.2 7.5 1.1 1 0 0 1 1 1 0 CDC45-like protein tRNA-synt_1 PF00133.22 ORF66383 - 8.5e-168 559.3 0.0 1.2e-166 555.5 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF66383 - 1.2e-42 145.4 0.0 3.1e-42 144.1 0.0 1.7 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA Val_tRNA-synt_C PF10458.9 ORF66383 - 1.7e-16 60.2 6.8 4.4e-16 58.9 6.8 1.7 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1_2 PF13603.6 ORF66383 - 4.4e-09 36.1 0.0 1.4e-06 28.0 0.0 2.5 1 1 1 2 2 2 2 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1g PF09334.11 ORF66383 - 9.3e-09 34.5 0.2 0.0014 17.5 0.0 4.1 4 1 0 4 4 4 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 ORF66383 - 0.036 13.0 0.0 0.058 12.3 0.0 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (K) ABC_tran_CTD PF16326.5 ORF66383 - 0.12 12.6 4.9 0.32 11.3 4.9 1.7 1 0 0 1 1 1 0 ABC transporter C-terminal domain tRNA-synt_1b PF00579.25 ORF66383 - 0.2 10.9 1.8 0.21 10.8 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) Pkinase PF00069.25 ORF142770 - 8.5e-76 254.8 0.0 8.5e-76 254.8 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF142770 - 5.9e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF142770 - 4.6e-09 36.7 1.0 1.9e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF142770 - 6.9e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF142770 - 7.9e-06 25.1 13.9 0.0093 15.5 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF142770 - 8.9e-06 25.2 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF142770 - 0.0042 16.4 0.0 0.048 13.0 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF142770 - 0.0079 16.6 13.8 0.22 12.0 2.5 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF142770 - 0.21 11.5 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF142770 - 0.41 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand AAA PF00004.29 ORF137926 - 4.4e-95 315.1 0.0 2.7e-46 157.3 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF137926 - 1.4e-25 88.9 8.5 4e-15 55.3 1.6 2.9 2 1 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 ORF137926 - 2.8e-22 78.7 2.6 6.4e-22 77.5 0.7 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.12 ORF137926 - 2.1e-13 50.3 0.0 1e-05 25.3 0.0 2.9 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 ORF137926 - 8.3e-12 45.8 0.1 0.00032 21.1 0.0 4.2 3 2 0 3 3 2 2 AAA ATPase domain AAA_2 PF07724.14 ORF137926 - 1.1e-11 45.1 0.0 6.6e-06 26.3 0.0 2.7 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 ORF137926 - 2.2e-10 40.8 0.0 5.6e-05 23.3 0.0 3.0 3 0 0 3 3 3 2 AAA domain CDC48_2 PF02933.17 ORF137926 - 5.6e-10 38.8 0.0 1.7e-09 37.4 0.0 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_5 PF07728.14 ORF137926 - 1.3e-09 38.2 0.1 0.00014 21.9 0.0 3.9 3 2 0 3 3 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF137926 - 3.5e-08 33.8 0.1 0.076 13.3 0.0 4.3 2 2 1 3 3 3 2 AAA domain TIP49 PF06068.13 ORF137926 - 6.6e-08 32.1 0.2 0.0017 17.7 0.0 2.7 3 0 0 3 3 3 2 TIP49 P-loop domain AAA_18 PF13238.6 ORF137926 - 3.9e-07 30.7 0.0 0.025 15.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 ORF137926 - 4.5e-07 30.2 0.0 0.012 16.0 0.0 3.2 3 0 0 3 3 2 2 RNA helicase AAA_14 PF13173.6 ORF137926 - 4.8e-07 29.9 0.0 0.012 15.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.10 ORF137926 - 8.1e-07 28.9 0.4 4.8e-06 26.5 0.1 2.4 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain TsaE PF02367.17 ORF137926 - 1.3e-06 28.5 0.0 0.93 9.5 0.0 3.5 3 0 0 3 3 3 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Mg_chelatase PF01078.21 ORF137926 - 1.4e-06 27.8 0.3 0.065 12.6 0.1 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 ORF137926 - 7.4e-06 25.6 0.1 0.051 13.1 0.0 2.8 2 1 0 2 2 2 2 P-loop containing dynein motor region IstB_IS21 PF01695.17 ORF137926 - 7.8e-06 25.7 0.0 0.16 11.7 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein ATPase_2 PF01637.18 ORF137926 - 1.9e-05 24.7 0.0 0.45 10.4 0.0 3.2 2 1 0 2 2 2 2 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 ORF137926 - 2.6e-05 24.2 1.6 2.9 7.8 0.0 4.9 5 0 0 5 5 5 1 NTPase AAA_17 PF13207.6 ORF137926 - 5.1e-05 23.7 1.5 0.15 12.5 0.0 3.5 4 0 0 4 4 2 2 AAA domain Sigma54_activat PF00158.26 ORF137926 - 6.8e-05 22.6 0.0 0.14 11.9 0.0 2.9 2 1 0 2 2 2 2 Sigma-54 interaction domain Viral_helicase1 PF01443.18 ORF137926 - 0.0001 22.2 0.0 0.0088 15.8 0.0 2.3 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 ORF137926 - 0.00011 21.9 0.1 1.1 8.9 0.0 3.4 2 1 1 3 3 3 1 AAA domain Parvo_NS1 PF01057.17 ORF137926 - 0.00016 20.8 0.0 0.29 10.2 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_24 PF13479.6 ORF137926 - 0.00019 21.2 0.1 0.22 11.2 0.0 2.7 2 1 0 2 2 2 1 AAA domain ABC_tran PF00005.27 ORF137926 - 0.00022 21.7 0.0 0.62 10.6 0.0 2.8 2 0 0 2 2 2 2 ABC transporter AAA_28 PF13521.6 ORF137926 - 0.00023 21.4 0.1 1.1 9.5 0.0 2.8 3 0 0 3 3 2 2 AAA domain ResIII PF04851.15 ORF137926 - 0.00031 20.8 0.0 0.19 11.7 0.0 2.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Bac_DnaA PF00308.18 ORF137926 - 0.00037 20.4 0.0 0.28 11.0 0.0 2.4 2 0 0 2 2 2 1 Bacterial dnaA protein Zeta_toxin PF06414.12 ORF137926 - 0.00042 19.7 0.0 0.68 9.2 0.0 2.9 3 0 0 3 3 3 1 Zeta toxin DUF815 PF05673.13 ORF137926 - 0.00042 19.5 0.0 0.088 12.0 0.0 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF815) Sigma54_activ_2 PF14532.6 ORF137926 - 0.00051 20.2 0.0 0.48 10.5 0.0 2.6 2 0 0 2 2 2 1 Sigma-54 interaction domain NB-ARC PF00931.22 ORF137926 - 0.00054 19.2 0.0 1.1 8.4 0.0 2.5 2 0 0 2 2 2 2 NB-ARC domain ATPase PF06745.13 ORF137926 - 0.00059 19.3 0.1 1.3 8.3 0.0 3.2 3 0 0 3 3 3 1 KaiC NACHT PF05729.12 ORF137926 - 0.0009 19.2 0.0 2.7 7.9 0.0 3.2 3 1 1 4 4 2 2 NACHT domain Cytidylate_kin2 PF13189.6 ORF137926 - 0.003 17.7 0.0 2.2 8.4 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase-like family PhoH PF02562.16 ORF137926 - 0.0031 17.0 0.2 2.5 7.5 0.0 2.4 2 0 0 2 2 2 1 PhoH-like protein Rad17 PF03215.15 ORF137926 - 0.0032 17.4 0.0 0.44 10.4 0.0 2.7 2 1 0 2 2 2 1 Rad17 P-loop domain UFD1 PF03152.14 ORF137926 - 0.0042 16.6 0.0 0.02 14.4 0.0 1.9 1 1 1 2 2 2 1 Ubiquitin fusion degradation protein UFD1 AAA_3 PF07726.11 ORF137926 - 0.0043 16.9 0.0 3.7 7.4 0.0 2.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 ORF137926 - 0.0053 17.1 0.3 7.3 6.9 0.1 3.4 3 1 1 4 4 3 0 AAA domain DUF2075 PF09848.9 ORF137926 - 0.0059 15.9 0.0 1 8.5 0.0 2.2 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_11 PF13086.6 ORF137926 - 0.018 14.9 0.0 6 6.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 ORF137926 - 0.03 14.1 0.1 6.4 6.4 0.1 2.7 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 ORF137926 - 0.04 13.7 0.0 6.7 6.5 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain KAP_NTPase PF07693.14 ORF137926 - 0.042 13.1 0.0 3 7.0 0.0 3.1 2 2 0 3 3 3 0 KAP family P-loop domain Zot PF05707.12 ORF137926 - 0.062 12.9 0.0 3.4 7.3 0.0 3.0 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) SKI PF01202.22 ORF137926 - 0.068 13.3 0.0 19 5.3 0.0 2.6 2 0 0 2 2 2 0 Shikimate kinase AFG1_ATPase PF03969.16 ORF137926 - 0.26 10.1 0.9 14 4.4 0.0 2.8 3 0 0 3 3 3 0 AFG1-like ATPase Pkinase PF00069.25 ORF143254 - 8.5e-76 254.8 0.0 8.5e-76 254.8 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF143254 - 5.8e-47 160.1 0.0 1.2e-46 159.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 ORF143254 - 4.5e-09 36.8 1.0 1.9e-08 34.7 1.0 2.2 1 0 0 1 1 1 1 PH domain Kdo PF06293.14 ORF143254 - 6.9e-07 28.8 0.0 1.4e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_1 PF00036.32 ORF143254 - 7.8e-06 25.1 13.9 0.0092 15.5 0.2 4.3 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 ORF143254 - 8.8e-06 25.3 9.8 0.013 15.3 0.3 4.0 2 1 1 3 3 3 2 EF-hand domain Kinase-like PF14531.6 ORF143254 - 0.0042 16.4 0.0 0.048 13.0 0.0 2.3 1 1 1 2 2 2 1 Kinase-like EF-hand_7 PF13499.6 ORF143254 - 0.008 16.6 13.9 0.23 11.9 2.6 4.2 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF143254 - 0.21 11.5 8.4 1.5 8.7 0.5 3.8 4 0 0 4 4 4 0 EF-hand domain pair EF-hand_5 PF13202.6 ORF143254 - 0.41 10.2 13.4 1.2 8.8 1.2 3.7 4 0 0 4 4 4 0 EF hand ANAPC4_WD40 PF12894.7 ORF123492 - 0.0034 17.6 0.0 0.011 16.0 0.0 1.8 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain DUF3146 PF11344.8 ORF123492 - 0.13 11.9 0.4 12 5.6 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3146) Alpha-mann_mid PF09261.11 ORF118854 - 1.7e-09 37.7 0.1 4.3e-09 36.4 0.1 1.7 1 0 0 1 1 1 1 Alpha mannosidase middle domain PTA_PTB PF01515.19 ORF44616 - 1.2e-102 343.5 0.1 1.7e-102 343.0 0.1 1.2 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase malic PF00390.19 ORF44616 - 9.9e-32 110.2 0.2 2.9e-29 102.2 0.2 2.6 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 ORF44616 - 3.3e-20 72.5 5.7 2e-19 69.9 2.0 2.8 2 1 0 2 2 2 1 Malic enzyme, NAD binding domain ELFV_dehydrog PF00208.21 ORF44616 - 0.008 15.9 0.8 0.024 14.4 0.8 1.8 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CCDC117 PF15810.5 ORF44616 - 0.18 12.1 0.1 2.1 8.7 0.1 2.3 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 117 Chitin_synth_1 PF01644.17 ORF102055 - 1.3e-20 74.0 0.5 6.9e-19 68.4 0.5 2.3 1 1 0 1 1 1 1 Chitin synthase Chitin_synth_2 PF03142.15 ORF102055 - 2.5e-09 36.3 6.9 2.5e-09 36.3 6.9 2.1 1 1 1 2 2 2 1 Chitin synthase Glyco_trans_2_3 PF13632.6 ORF102055 - 7e-08 32.6 0.4 7e-08 32.6 0.4 2.6 3 0 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF102055 - 0.002 18.0 0.0 0.0032 17.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 DUF4337 PF14235.6 ORF102055 - 0.098 12.8 0.5 0.18 11.9 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) DUF4227 PF14004.6 ORF102055 - 0.38 10.7 5.4 1.8 8.6 5.4 2.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4227) PPDK_N PF01326.19 ORF145744 - 1.1e-17 64.3 0.0 3.2e-08 33.2 0.0 4.2 2 2 2 4 4 4 3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DUF3492 PF11997.8 ORF145744 - 0.077 12.7 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3492) DnaJ PF00226.31 ORF81711 - 6.5e-21 74.2 0.7 2.2e-20 72.6 0.2 2.2 2 0 0 2 2 2 1 DnaJ domain TPR_19 PF14559.6 ORF81711 - 3.5e-09 37.0 11.5 6.1e-06 26.7 0.1 4.6 3 2 2 5 5 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF81711 - 3.9e-07 29.7 9.6 0.016 15.3 0.9 4.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF81711 - 4.5e-07 29.4 0.2 0.0045 16.8 0.2 2.9 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF81711 - 0.00014 22.0 0.1 0.055 13.9 0.1 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF81711 - 0.00016 22.3 15.8 0.0014 19.2 5.6 5.0 4 1 1 5 5 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF81711 - 0.00088 19.4 4.1 0.00088 19.4 4.1 4.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF81711 - 0.0014 18.9 2.1 0.0014 18.9 2.1 3.9 5 0 0 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF81711 - 0.0021 18.3 2.1 0.044 14.0 0.2 2.7 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF81711 - 0.0085 16.8 28.9 0.027 15.3 4.9 6.0 4 1 2 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF81711 - 0.09 13.0 0.2 7.8 7.0 0.0 3.8 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 ORF81711 - 0.33 11.1 3.8 17 5.7 0.1 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF81711 - 0.47 11.2 0.0 0.47 11.2 0.0 5.5 6 0 0 6 6 6 0 Tetratricopeptide repeat GBP PF02263.19 ORF101217 - 2.8e-09 36.6 0.0 9.6e-09 34.9 0.0 1.8 1 1 0 1 1 1 1 Guanylate-binding protein, N-terminal domain PriC PF07445.12 ORF101217 - 0.0096 15.9 0.6 0.028 14.4 0.3 1.8 2 0 0 2 2 2 1 Primosomal replication protein priC DUF4229 PF14012.6 ORF101217 - 5.9 7.1 7.1 0.5 10.5 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) TAFH PF07531.14 ORF72466 - 0.024 14.7 0.1 0.16 12.1 0.1 2.4 1 0 0 1 1 1 0 NHR1 homology to TAF Glyco_hydro_46 PF01374.18 ORF72466 - 0.46 10.1 5.2 20 4.8 0.0 3.5 2 1 1 3 3 3 0 Glycosyl hydrolase family 46 CPG4 PF15481.6 ORF72466 - 7.6 7.2 11.4 0.72 10.5 0.3 3.9 3 1 0 3 3 3 0 Chondroitin proteoglycan 4 cNMP_binding PF00027.29 ORF7326 - 4.9e-25 87.4 1.5 8.2e-07 29.0 0.0 4.3 4 0 0 4 4 4 4 Cyclic nucleotide-binding domain Rep_Org_C PF06926.11 ORF7326 - 0.085 13.2 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus Ank_2 PF12796.7 ORF17870 - 0.0045 17.5 0.1 0.12 13.0 0.0 2.1 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF17870 - 0.26 11.8 2.1 0.72 10.4 0.0 2.9 3 0 0 3 3 3 0 Ankyrin repeat Ank_2 PF12796.7 ORF130048 - 0.0045 17.5 0.1 0.12 13.0 0.0 2.1 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF130048 - 0.26 11.8 2.1 0.72 10.4 0.0 2.9 3 0 0 3 3 3 0 Ankyrin repeat Cation_ATPase_C PF00689.21 ORF120159 - 1.3e-44 152.1 2.4 1.3e-44 152.1 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF120159 - 4e-13 50.1 3.9 6.1e-11 43.0 3.9 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF120159 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF120159 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF120159 - 3.1e-05 23.8 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF120159 - 0.0088 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF120159 - 0.091 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III PKD_channel PF08016.12 ORF152696 - 1.8e-17 63.2 22.4 3e-16 59.1 21.4 3.0 2 1 0 2 2 2 1 Polycystin cation channel Ion_trans PF00520.31 ORF152696 - 4.4e-08 32.7 16.8 8.8e-08 31.7 16.8 1.5 1 0 0 1 1 1 1 Ion transport protein Fib_alpha PF08702.10 ORF152696 - 0.00084 19.5 3.3 0.03 14.5 0.2 2.3 2 0 0 2 2 2 2 Fibrinogen alpha/beta chain family DUF948 PF06103.11 ORF152696 - 0.15 12.4 5.1 2.5 8.4 0.2 3.7 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF16 PF01519.16 ORF152696 - 0.18 12.3 0.7 0.55 10.7 0.5 1.8 2 0 0 2 2 2 0 Protein of unknown function DUF16 FAM184 PF15665.5 ORF152696 - 0.19 11.5 4.6 0.11 12.3 0.3 2.1 2 0 0 2 2 2 0 Family with sequence similarity 184, A and B Phage_GPO PF05929.11 ORF152696 - 0.29 10.7 2.0 0.46 10.1 0.3 1.8 2 0 0 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase Atg14 PF10186.9 ORF152696 - 1.9 7.5 4.6 1.1 8.2 0.2 2.0 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Strep_SA_rep PF06696.11 ORF150071 - 0.6 10.2 8.1 0.86 9.7 4.2 3.0 2 0 0 2 2 2 0 Streptococcal surface antigen repeat Peptidase_C2 PF00648.21 ORF91795 - 7.7e-65 218.8 0.0 1.4e-64 218.0 0.0 1.4 1 0 0 1 1 1 1 Calpain family cysteine protease zf-CCHC PF00098.23 ORF91795 - 8.5e-09 35.1 0.8 2.1e-08 33.9 0.8 1.7 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_5 PF14787.6 ORF91795 - 0.068 12.9 0.4 0.18 11.5 0.4 1.6 1 0 0 1 1 1 0 GAG-polyprotein viral zinc-finger Ion_trans PF00520.31 ORF80669 - 7.7e-09 35.1 22.7 7.7e-09 35.1 22.7 3.1 2 1 0 2 2 2 1 Ion transport protein YqgB PF11036.8 ORF80669 - 0.064 13.0 0.8 0.17 11.6 0.8 1.7 1 0 0 1 1 1 0 Virulence promoting factor Meth_synt_2 PF01717.18 ORF13367 - 7.7e-172 570.9 0.0 2e-163 543.3 0.0 2.4 2 0 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 ORF13367 - 8.4e-134 446.0 0.0 6.9e-125 416.7 0.0 2.2 2 0 0 2 2 2 2 Cobalamin-independent synthase, N-terminal domain Cation_ATPase_C PF00689.21 ORF77312 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF77312 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF77312 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF77312 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF77312 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF77312 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF77312 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF76568 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF76568 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF76568 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF76568 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF76568 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF76568 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF76568 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF76391 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF76391 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF76391 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF76391 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF76391 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF76391 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF76391 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF18104 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF18104 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF18104 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF18104 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF18104 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF18104 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF18104 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF150360 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF150360 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF150360 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF150360 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF150360 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF150360 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF150360 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF147151 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF147151 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF147151 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF147151 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF147151 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF147151 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF147151 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF122121 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF122121 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF122121 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF122121 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF122121 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF122121 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF122121 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Cation_ATPase_C PF00689.21 ORF121438 - 1.2e-44 152.2 2.4 1.2e-44 152.2 2.4 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF121438 - 3.3e-13 50.4 3.7 5.1e-11 43.3 3.7 3.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 ORF121438 - 1e-11 44.7 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 ORF121438 - 6.7e-08 32.3 0.1 6.7e-08 32.3 0.1 2.5 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 ORF121438 - 3.1e-05 23.9 1.6 0.00019 21.3 0.8 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF121438 - 0.0087 16.5 0.0 0.022 15.2 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Phage_holin_3_6 PF07332.11 ORF121438 - 0.09 12.8 0.5 0.27 11.3 0.5 1.8 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Spectrin PF00435.21 ORF113537 - 0.014 15.9 2.5 0.014 15.9 2.5 7.6 4 1 1 7 7 7 0 Spectrin repeat Noelin-1 PF12308.8 ORF113537 - 0.023 14.7 0.1 0.023 14.7 0.1 7.1 3 2 1 7 7 7 0 Neurogenesis glycoprotein DUF1664 PF07889.12 ORF113537 - 1.1 9.3 61.7 0.45 10.6 4.9 7.9 3 3 3 7 7 7 0 Protein of unknown function (DUF1664) BLOC1_2 PF10046.9 ORF113537 - 1.8 8.9 77.1 0.055 13.8 2.9 8.8 6 4 3 9 9 9 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SlyX PF04102.12 ORF113537 - 2.9 8.6 65.4 0.035 14.7 8.2 9.9 7 2 3 11 11 11 0 SlyX Lebercilin PF15619.6 ORF113537 - 4.3 7.0 90.3 0.17 11.5 16.3 6.3 5 2 1 6 6 6 0 Ciliary protein causing Leber congenital amaurosis disease TORC_N PF12884.7 ORF113537 - 8.9 7.2 9.0 78 4.2 2.8 4.1 3 0 0 3 3 3 0 Transducer of regulated CREB activity, N terminus Peptidase_C2 PF00648.21 ORF133147 - 4.6e-84 282.0 0.0 6.5e-84 281.5 0.0 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF133147 - 0.071 13.4 0.0 0.2 11.9 0.0 1.8 1 0 0 1 1 1 0 Calpain large subunit, domain III EF-hand_6 PF13405.6 ORF133147 - 0.098 12.6 0.8 3.1 8.0 0.0 3.4 3 0 0 3 3 3 0 EF-hand domain Peptidase_C2 PF00648.21 ORF129792 - 4.6e-84 282.0 0.0 6.5e-84 281.5 0.0 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF129792 - 0.074 13.3 0.0 0.2 11.9 0.0 1.7 1 0 0 1 1 1 0 Calpain large subunit, domain III EF-hand_6 PF13405.6 ORF129792 - 0.11 12.5 0.8 3.1 8.0 0.0 3.3 3 0 0 3 3 3 0 EF-hand domain AA_permease PF00324.21 ORF9929 - 2.4e-60 204.5 37.2 2.8e-60 204.3 37.2 1.1 1 0 0 1 1 1 1 Amino acid permease SLC12 PF03522.15 ORF9929 - 3e-25 89.1 0.4 2.9e-16 59.5 0.0 2.3 1 1 1 2 2 2 2 Solute carrier family 12 AA_permease_2 PF13520.6 ORF9929 - 1.5e-11 43.8 50.4 2.3e-11 43.2 50.4 1.1 1 0 0 1 1 1 1 Amino acid permease DUF2417 PF10329.9 ORF9929 - 0.62 9.4 7.8 2.9 7.2 6.9 2.6 2 0 0 2 2 2 0 Region of unknown function (DUF2417) VPS13_C PF16909.5 ORF80630 - 2.8e-43 147.8 10.8 3.1e-40 137.9 2.3 3.2 3 0 0 3 3 3 2 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 ORF80630 - 0.00054 20.3 0.0 0.0028 18.0 0.0 2.1 2 0 0 2 2 2 1 Autophagy-related protein C terminal domain JUPITER PF17054.5 ORF80630 - 0.011 15.3 0.0 0.027 14.0 0.0 1.6 1 0 0 1 1 1 0 Microtubule-Associated protein Jupiter bPH_3 PF14470.6 ORF80630 - 0.53 10.7 5.8 0.15 12.4 0.4 2.8 3 0 0 3 3 3 0 Bacterial PH domain AA_permease PF00324.21 ORF673 - 2.4e-60 204.5 37.2 2.8e-60 204.3 37.2 1.1 1 0 0 1 1 1 1 Amino acid permease SLC12 PF03522.15 ORF673 - 3e-25 89.1 0.4 2.9e-16 59.5 0.0 2.3 1 1 1 2 2 2 2 Solute carrier family 12 AA_permease_2 PF13520.6 ORF673 - 1.5e-11 43.8 50.4 2.3e-11 43.2 50.4 1.1 1 0 0 1 1 1 1 Amino acid permease DUF2417 PF10329.9 ORF673 - 0.62 9.4 7.8 2.9 7.2 6.9 2.6 2 0 0 2 2 2 0 Region of unknown function (DUF2417) AA_permease PF00324.21 ORF63270 - 2.4e-60 204.5 37.2 2.8e-60 204.3 37.2 1.1 1 0 0 1 1 1 1 Amino acid permease SLC12 PF03522.15 ORF63270 - 3e-25 89.1 0.4 2.9e-16 59.5 0.0 2.3 1 1 1 2 2 2 2 Solute carrier family 12 AA_permease_2 PF13520.6 ORF63270 - 1.5e-11 43.8 50.4 2.3e-11 43.2 50.4 1.1 1 0 0 1 1 1 1 Amino acid permease DUF2417 PF10329.9 ORF63270 - 0.62 9.4 7.8 2.9 7.2 6.9 2.6 2 0 0 2 2 2 0 Region of unknown function (DUF2417) VPS13_C PF16909.5 ORF49741 - 2.8e-43 147.8 10.8 3.1e-40 137.9 2.3 3.2 3 0 0 3 3 3 2 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 ORF49741 - 0.00054 20.3 0.0 0.0028 18.0 0.0 2.1 2 0 0 2 2 2 1 Autophagy-related protein C terminal domain JUPITER PF17054.5 ORF49741 - 0.011 15.3 0.0 0.027 14.0 0.0 1.6 1 0 0 1 1 1 0 Microtubule-Associated protein Jupiter bPH_3 PF14470.6 ORF49741 - 0.53 10.7 5.8 0.15 12.4 0.4 2.8 3 0 0 3 3 3 0 Bacterial PH domain HECT PF00632.25 ORF58310 - 1e-56 192.7 1.0 2e-56 191.7 0.1 1.9 2 0 0 2 2 2 1 HECT-domain (ubiquitin-transferase) Pkinase PF00069.25 ORF67946 - 1.4e-78 263.9 0.2 1.4e-78 263.9 0.2 2.3 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67946 - 1e-41 143.0 0.6 1.7e-41 142.2 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_6 PF13405.6 ORF67946 - 2e-11 42.8 3.7 4.1e-05 23.2 0.2 4.0 3 0 0 3 3 3 2 EF-hand domain PH PF00169.29 ORF67946 - 2.2e-10 41.0 1.3 7e-10 39.4 1.3 1.9 1 0 0 1 1 1 1 PH domain EF-hand_1 PF00036.32 ORF67946 - 6.3e-09 34.8 8.5 0.00078 18.8 0.3 4.1 4 0 0 4 4 4 2 EF hand EF-hand_7 PF13499.6 ORF67946 - 2.8e-07 30.9 10.2 0.00076 19.9 1.5 4.1 3 0 0 3 3 3 2 EF-hand domain pair Kdo PF06293.14 ORF67946 - 1e-06 28.3 0.0 2.2e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF67946 - 7.2e-06 25.5 0.1 3.6e-05 23.2 0.0 2.3 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF67946 - 2.4e-05 23.3 0.1 0.00052 18.9 0.0 2.5 2 0 0 2 2 2 1 Fungal protein kinase EF-hand_8 PF13833.6 ORF67946 - 0.0097 15.7 7.0 0.58 10.0 0.3 3.1 3 0 0 3 3 3 2 EF-hand domain pair APH PF01636.23 ORF67946 - 0.038 13.9 0.0 0.12 12.2 0.0 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_5 PF13202.6 ORF67946 - 2 8.0 12.3 0.22 11.1 0.2 3.4 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF67371 - 1.4e-78 263.9 0.2 1.4e-78 263.9 0.2 2.3 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF67371 - 1e-41 143.0 0.6 1.7e-41 142.2 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_6 PF13405.6 ORF67371 - 2e-11 42.8 3.7 4.1e-05 23.2 0.2 4.0 3 0 0 3 3 3 2 EF-hand domain PH PF00169.29 ORF67371 - 2.2e-10 41.0 1.3 7e-10 39.4 1.3 1.9 1 0 0 1 1 1 1 PH domain EF-hand_1 PF00036.32 ORF67371 - 6.3e-09 34.8 8.5 0.00078 18.8 0.3 4.1 4 0 0 4 4 4 2 EF hand EF-hand_7 PF13499.6 ORF67371 - 2.8e-07 30.9 10.2 0.00076 19.9 1.5 4.1 3 0 0 3 3 3 2 EF-hand domain pair Kdo PF06293.14 ORF67371 - 1e-06 28.3 0.0 2.2e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF67371 - 7.2e-06 25.5 0.1 3.6e-05 23.2 0.0 2.3 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF67371 - 2.4e-05 23.3 0.1 0.00052 18.9 0.0 2.5 2 0 0 2 2 2 1 Fungal protein kinase EF-hand_8 PF13833.6 ORF67371 - 0.0097 15.7 7.0 0.58 10.0 0.3 3.1 3 0 0 3 3 3 2 EF-hand domain pair APH PF01636.23 ORF67371 - 0.038 13.9 0.0 0.12 12.2 0.0 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_5 PF13202.6 ORF67371 - 2 8.0 12.3 0.22 11.1 0.2 3.4 4 0 0 4 4 4 0 EF hand Kinesin PF00225.23 ORF60119 - 5.2e-115 383.9 0.4 5.2e-115 383.9 0.4 3.2 3 1 0 3 3 3 1 Kinesin motor domain Microtub_bd PF16796.5 ORF60119 - 1.1e-24 87.1 0.1 1.1e-24 87.1 0.1 2.5 3 1 1 4 4 4 1 Microtubule binding Protocadherin PF08374.11 ORF60119 - 0.014 15.4 0.3 0.014 15.4 0.3 3.8 2 2 1 3 3 3 0 Protocadherin AAA_22 PF13401.6 ORF60119 - 0.36 11.1 4.4 0.49 10.7 0.0 3.2 3 1 0 3 3 3 0 AAA domain Kinesin_assoc PF16183.5 ORF60119 - 1.3 9.1 27.8 62 3.7 23.6 3.0 2 1 0 2 2 2 0 Kinesin-associated Pkinase PF00069.25 ORF39430 - 1.4e-78 263.9 0.2 1.4e-78 263.9 0.2 2.3 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF39430 - 1e-41 143.0 0.6 1.7e-41 142.2 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_6 PF13405.6 ORF39430 - 2e-11 42.8 3.7 4.1e-05 23.2 0.2 4.0 3 0 0 3 3 3 2 EF-hand domain PH PF00169.29 ORF39430 - 2.2e-10 41.0 1.3 7e-10 39.4 1.3 1.9 1 0 0 1 1 1 1 PH domain EF-hand_1 PF00036.32 ORF39430 - 6.3e-09 34.8 8.5 0.00078 18.8 0.3 4.1 4 0 0 4 4 4 2 EF hand EF-hand_7 PF13499.6 ORF39430 - 2.8e-07 30.9 10.2 0.00076 19.9 1.5 4.1 3 0 0 3 3 3 2 EF-hand domain pair Kdo PF06293.14 ORF39430 - 1e-06 28.3 0.0 2.2e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF39430 - 7.2e-06 25.5 0.1 3.6e-05 23.2 0.0 2.3 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF39430 - 2.4e-05 23.3 0.1 0.00052 18.9 0.0 2.5 2 0 0 2 2 2 1 Fungal protein kinase EF-hand_8 PF13833.6 ORF39430 - 0.0097 15.7 7.0 0.58 10.0 0.3 3.1 3 0 0 3 3 3 2 EF-hand domain pair APH PF01636.23 ORF39430 - 0.038 13.9 0.0 0.12 12.2 0.0 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_5 PF13202.6 ORF39430 - 2 8.0 12.3 0.22 11.1 0.2 3.4 4 0 0 4 4 4 0 EF hand AAA_30 PF13604.6 ORF151838 - 2.3e-12 47.0 0.0 5.3e-12 45.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 ORF151838 - 2.9e-10 40.3 0.1 0.00077 19.3 0.1 2.5 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase HNH PF01844.23 ORF151838 - 2e-08 34.2 0.4 4.7e-08 33.1 0.4 1.6 1 0 0 1 1 1 1 HNH endonuclease AAA_16 PF13191.6 ORF151838 - 4.6e-05 23.9 0.5 0.00045 20.7 0.5 2.4 1 1 0 1 1 1 1 AAA ATPase domain KTI12 PF08433.10 ORF151838 - 7.5e-05 22.3 0.0 0.00013 21.6 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 MobB PF03205.14 ORF151838 - 0.00017 21.5 0.0 0.00031 20.7 0.0 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 ORF151838 - 0.00049 20.5 0.0 0.00093 19.6 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PIF1 PF05970.14 ORF151838 - 0.00051 19.3 0.0 0.0015 17.8 0.0 1.7 2 0 0 2 2 2 1 PIF1-like helicase AAA_19 PF13245.6 ORF151838 - 0.00078 19.8 0.2 0.0044 17.3 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 ORF151838 - 0.0032 17.5 0.0 0.0066 16.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 ORF151838 - 0.0034 17.3 0.1 0.0058 16.6 0.1 1.4 1 0 0 1 1 1 1 NTPase Torsin PF06309.11 ORF151838 - 0.004 17.2 0.0 0.012 15.7 0.0 1.7 1 0 0 1 1 1 1 Torsin HNH_5 PF14279.6 ORF151838 - 0.0056 16.5 0.2 0.013 15.4 0.2 1.6 1 0 0 1 1 1 1 HNH endonuclease DUF2075 PF09848.9 ORF151838 - 0.006 15.9 0.0 0.0095 15.2 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 ORF151838 - 0.011 15.7 0.0 0.025 14.5 0.0 1.6 1 0 0 1 1 1 0 NACHT domain MeaB PF03308.16 ORF151838 - 0.013 14.5 0.0 0.021 13.8 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB IstB_IS21 PF01695.17 ORF151838 - 0.013 15.3 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein ATPase PF06745.13 ORF151838 - 0.016 14.6 0.0 0.03 13.7 0.0 1.4 1 0 0 1 1 1 0 KaiC Mg_chelatase PF01078.21 ORF151838 - 0.021 14.2 0.0 0.038 13.4 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Herpes_Helicase PF02689.14 ORF151838 - 0.021 12.8 0.0 0.035 12.1 0.0 1.2 1 0 0 1 1 1 0 Helicase AAA_22 PF13401.6 ORF151838 - 0.024 14.9 0.1 0.073 13.3 0.1 1.8 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF151838 - 0.036 14.6 0.0 0.11 13.1 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA_7 PF12775.7 ORF151838 - 0.037 13.5 0.1 0.069 12.7 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region cobW PF02492.19 ORF151838 - 0.046 13.3 0.0 0.081 12.5 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 ORF151838 - 0.06 13.5 0.0 0.14 12.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF3079 PF11278.8 ORF151838 - 0.069 13.0 0.4 0.27 11.1 0.0 2.2 2 0 0 2 2 1 0 Protein of unknown function (DUF3079) TsaE PF02367.17 ORF151838 - 0.073 13.1 0.0 0.31 11.0 0.0 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 ORF151838 - 0.098 12.4 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 ORF151838 - 0.1 11.5 0.0 0.16 10.8 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain LytR_C PF13399.6 ORF151838 - 0.12 13.4 0.0 0.59 11.2 0.0 2.0 2 0 0 2 2 2 0 LytR cell envelope-related transcriptional attenuator AAA_29 PF13555.6 ORF151838 - 0.15 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RNA_helicase PF00910.22 ORF151838 - 0.17 12.3 0.0 0.35 11.3 0.0 1.6 1 0 0 1 1 1 0 RNA helicase LpxK PF02606.14 ORF151838 - 0.19 10.8 0.0 0.34 10.0 0.0 1.3 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase Pkinase PF00069.25 ORF131596 - 1.4e-78 263.9 0.2 1.4e-78 263.9 0.2 2.3 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF131596 - 1e-41 143.0 0.6 1.7e-41 142.2 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_6 PF13405.6 ORF131596 - 2e-11 42.8 3.7 4.1e-05 23.2 0.2 4.0 3 0 0 3 3 3 2 EF-hand domain PH PF00169.29 ORF131596 - 2.2e-10 41.0 1.3 7e-10 39.4 1.3 1.9 1 0 0 1 1 1 1 PH domain EF-hand_1 PF00036.32 ORF131596 - 6.3e-09 34.8 8.5 0.00078 18.8 0.3 4.1 4 0 0 4 4 4 2 EF hand EF-hand_7 PF13499.6 ORF131596 - 2.8e-07 30.9 10.2 0.00076 19.9 1.5 4.1 3 0 0 3 3 3 2 EF-hand domain pair Kdo PF06293.14 ORF131596 - 1e-06 28.3 0.0 2.2e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF131596 - 7.2e-06 25.5 0.1 3.6e-05 23.2 0.0 2.3 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF131596 - 2.4e-05 23.3 0.1 0.00052 18.9 0.0 2.5 2 0 0 2 2 2 1 Fungal protein kinase EF-hand_8 PF13833.6 ORF131596 - 0.0097 15.7 7.0 0.58 10.0 0.3 3.1 3 0 0 3 3 3 2 EF-hand domain pair APH PF01636.23 ORF131596 - 0.038 13.9 0.0 0.12 12.2 0.0 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_5 PF13202.6 ORF131596 - 2 8.0 12.3 0.22 11.1 0.2 3.4 4 0 0 4 4 4 0 EF hand Pkinase PF00069.25 ORF127253 - 1.4e-78 263.9 0.2 1.4e-78 263.9 0.2 2.3 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF127253 - 1e-41 143.0 0.6 1.7e-41 142.2 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_6 PF13405.6 ORF127253 - 2e-11 42.8 3.7 4.1e-05 23.2 0.2 4.0 3 0 0 3 3 3 2 EF-hand domain PH PF00169.29 ORF127253 - 2.2e-10 41.0 1.3 7e-10 39.4 1.3 1.9 1 0 0 1 1 1 1 PH domain EF-hand_1 PF00036.32 ORF127253 - 6.3e-09 34.8 8.5 0.00078 18.8 0.3 4.1 4 0 0 4 4 4 2 EF hand EF-hand_7 PF13499.6 ORF127253 - 2.8e-07 30.9 10.2 0.00076 19.9 1.5 4.1 3 0 0 3 3 3 2 EF-hand domain pair Kdo PF06293.14 ORF127253 - 1e-06 28.3 0.0 2.2e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF127253 - 7.2e-06 25.5 0.1 3.6e-05 23.2 0.0 2.3 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF127253 - 2.4e-05 23.3 0.1 0.00052 18.9 0.0 2.5 2 0 0 2 2 2 1 Fungal protein kinase EF-hand_8 PF13833.6 ORF127253 - 0.0097 15.7 7.0 0.58 10.0 0.3 3.1 3 0 0 3 3 3 2 EF-hand domain pair APH PF01636.23 ORF127253 - 0.038 13.9 0.0 0.12 12.2 0.0 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_5 PF13202.6 ORF127253 - 2 8.0 12.3 0.22 11.1 0.2 3.4 4 0 0 4 4 4 0 EF hand DUF4215 PF13948.6 ORF97465 - 3.9e-38 129.6 100.9 2.5e-12 47.0 19.8 5.6 5 0 0 5 5 5 5 Domain of unknown function (DUF4215) Bac_rhodopsin PF01036.18 ORF97465 - 0.005 16.4 0.3 0.005 16.4 0.3 3.2 3 1 1 4 4 4 1 Bacteriorhodopsin-like protein PspB PF06667.12 ORF97465 - 0.012 15.6 1.4 0.012 15.6 1.4 3.7 5 0 0 5 5 5 0 Phage shock protein B DUF4051 PF13260.6 ORF97465 - 1.2 8.9 4.5 12 5.7 0.1 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4051) DUF148 PF02520.17 ORF71070 - 0.046 13.8 0.1 0.046 13.8 0.1 3.4 5 1 0 5 5 5 0 Domain of unknown function DUF148 F-protein PF00469.20 ORF71070 - 0.084 12.5 0.4 0.23 11.0 0.3 1.8 2 0 0 2 2 2 0 Negative factor, (F-Protein) or Nef TRP PF06011.12 ORF13441 - 0.00038 19.3 25.9 0.00038 19.3 25.9 1.7 2 0 0 2 2 2 1 Transient receptor potential (TRP) ion channel VSP PF03302.13 ORF13441 - 0.0019 17.1 6.2 0.0031 16.4 6.2 1.2 1 0 0 1 1 1 1 Giardia variant-specific surface protein DUF4116 PF13475.6 ORF119243 - 3.5e-25 87.5 0.0 3.5e-08 33.0 0.1 5.4 2 2 2 5 5 5 5 Domain of unknown function (DUF4116) KR PF08659.10 ORF119243 - 0.0004 20.3 0.0 0.0013 18.7 0.0 1.9 2 0 0 2 2 2 1 KR domain Skp1 PF01466.19 ORF119243 - 0.0027 17.8 0.0 0.0081 16.3 0.0 1.8 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Cullin PF00888.22 ORF99651 - 3.3e-146 488.5 7.9 3.3e-146 488.5 7.9 1.3 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF99651 - 1.5e-24 85.7 3.9 3.2e-24 84.8 1.1 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain BcsB PF03170.13 ORF150219 - 5.5e-220 731.8 1.2 6.4e-220 731.6 1.2 1.0 1 0 0 1 1 1 1 Bacterial cellulose synthase subunit Ank_2 PF12796.7 ORF69334 - 3.3e-13 50.0 0.1 2.1e-06 28.2 0.0 3.8 2 2 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF69334 - 2.4e-11 43.6 0.0 1.9e-08 34.4 0.0 3.6 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 ORF69334 - 1.3e-10 41.2 0.7 0.0002 21.7 0.0 4.6 5 1 0 5 5 5 2 Ankyrin repeat Ank_3 PF13606.6 ORF69334 - 2e-08 33.8 0.0 0.03 14.9 0.0 5.0 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF69334 - 3.8e-08 33.7 0.0 2.7e-06 27.8 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeats (many copies) DUF2463 PF09591.10 ORF69334 - 0.056 13.3 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2463) Ion_trans PF00520.31 ORF69334 - 4.9 6.3 13.2 6.9 5.8 8.7 2.7 2 1 0 2 2 2 0 Ion transport protein Radial_spoke_3 PF06098.11 ORF2683 - 1.8e-59 201.4 19.3 1.8e-59 201.4 19.3 3.1 2 1 1 3 3 3 1 Radial spoke protein 3 Cullin PF00888.22 ORF105337 - 3.2e-146 488.5 7.9 3.2e-146 488.5 7.9 1.3 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF105337 - 1.5e-24 85.8 3.9 3.1e-24 84.8 1.1 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain Cullin PF00888.22 ORF6723 - 3.2e-146 488.5 7.9 3.2e-146 488.5 7.9 1.3 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF6723 - 1.5e-24 85.8 3.9 3.1e-24 84.8 1.1 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain WD40 PF00400.32 ORF54635 - 1.2e-09 38.6 0.1 1 10.3 0.0 5.8 6 0 0 6 6 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF54635 - 1.4e-07 31.7 0.1 0.0063 16.8 0.0 4.9 2 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain Ras PF00071.22 ORF54635 - 7.6e-07 28.9 1.9 1.2e-06 28.2 0.0 2.0 2 0 0 2 2 2 1 Ras family Roc PF08477.13 ORF54635 - 0.00078 19.7 0.0 0.0026 18.0 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Tropomyosin_1 PF12718.7 ORF54635 - 0.0029 17.7 17.4 0.0029 17.7 17.4 2.6 1 1 1 2 2 2 1 Tropomyosin like MMR_HSR1 PF01926.23 ORF54635 - 0.0037 17.3 0.7 0.013 15.5 0.0 2.3 2 1 0 2 2 2 1 50S ribosome-binding GTPase HOOK PF05622.12 ORF54635 - 0.0055 14.9 27.1 0.0084 14.3 27.1 1.1 1 0 0 1 1 1 1 HOOK protein Dynamin_N PF00350.23 ORF54635 - 0.016 15.3 9.0 0.041 13.9 0.0 3.4 3 1 0 3 3 3 0 Dynamin family Zeta_toxin PF06414.12 ORF54635 - 0.04 13.2 0.1 0.04 13.2 0.1 2.3 2 0 0 2 2 2 0 Zeta toxin AAA_28 PF13521.6 ORF54635 - 0.042 14.1 1.2 0.14 12.4 0.0 2.4 2 1 1 3 3 3 0 AAA domain Sen15 PF09631.10 ORF54635 - 0.13 12.6 1.7 0.37 11.1 0.0 2.6 2 1 0 2 2 2 0 Sen15 protein AAA_29 PF13555.6 ORF54635 - 0.13 12.0 0.0 0.74 9.6 0.0 2.2 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF54635 - 0.26 10.9 9.4 4.6 6.9 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain Fez1 PF06818.15 ORF54635 - 0.56 10.6 30.4 3.8 7.9 7.4 2.2 1 1 1 2 2 2 0 Fez1 EzrA PF06160.12 ORF54635 - 0.64 8.1 24.3 1.7 6.7 24.0 1.6 1 1 0 1 1 1 0 Septation ring formation regulator, EzrA ATG16 PF08614.11 ORF54635 - 0.66 10.2 36.2 1.2 9.3 36.2 1.4 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) ABC_tran PF00005.27 ORF54635 - 1.6 9.3 0.0 1.6 9.3 0.0 2.7 2 1 0 2 2 1 0 ABC transporter TPR_MLP1_2 PF07926.12 ORF54635 - 1.7 8.7 37.9 3.8 7.6 18.6 2.5 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein KASH_CCD PF14662.6 ORF54635 - 1.9 8.3 34.5 3.6 7.4 34.5 1.5 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH DUF1664 PF07889.12 ORF54635 - 2.5 8.2 16.7 0.51 10.4 11.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4200 PF13863.6 ORF54635 - 2.5 8.5 36.2 20 5.6 31.3 3.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) V_ATPase_I PF01496.19 ORF54635 - 5.3 4.8 15.1 8 4.2 15.1 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DMPK_coil PF08826.10 ORF54635 - 7.5 6.8 27.5 0.7 10.0 7.5 3.5 2 1 1 3 3 3 0 DMPK coiled coil domain like Tektin PF03148.14 ORF54635 - 8.8 5.0 27.8 3.4 6.3 9.7 2.2 1 1 1 2 2 2 0 Tektin family cNMP_binding PF00027.29 ORF148722 - 9.8e-31 105.7 0.0 2.9e-16 59.3 0.0 3.2 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain Ion_trans PF00520.31 ORF148722 - 3.7e-16 59.1 14.7 6.2e-16 58.4 14.7 1.4 1 0 0 1 1 1 1 Ion transport protein Tex_N PF09371.10 ORF101614 - 1e-71 240.4 0.3 1.7e-71 239.6 0.3 1.4 1 0 0 1 1 1 1 Tex-like protein N-terminal domain Tex_YqgF PF16921.5 ORF101614 - 1.1e-50 171.3 0.3 1.9e-50 170.5 0.3 1.4 1 0 0 1 1 1 1 Tex protein YqgF-like domain HHH_3 PF12836.7 ORF101614 - 8.7e-29 99.6 0.0 2e-28 98.4 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif S1 PF00575.23 ORF101614 - 2.5e-24 85.4 0.6 4.6e-24 84.5 0.6 1.5 1 0 0 1 1 1 1 S1 RNA binding domain HHH_9 PF17674.1 ORF101614 - 5.7e-24 84.8 0.0 1.9e-23 83.2 0.0 2.0 1 0 0 1 1 1 1 HHH domain HHH_7 PF14635.6 ORF101614 - 5.1e-10 39.6 0.0 1.3e-09 38.3 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif YqgF PF14639.6 ORF101614 - 1.2e-07 31.6 0.0 2.9e-07 30.4 0.0 1.6 1 0 0 1 1 1 1 Holliday-junction resolvase-like of SPT6 HHH_6 PF14579.6 ORF101614 - 0.019 15.2 0.1 0.11 12.8 0.0 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix motif Cyt-b5 PF00173.28 ORF30468 - 9.7e-06 25.6 0.0 2.5e-05 24.3 0.0 1.7 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FAD_binding_6 PF00970.24 ORF30468 - 1.5e-05 25.3 0.2 6.9e-05 23.1 0.0 2.1 1 1 1 2 2 2 1 Oxidoreductase FAD-binding domain Cytochrom_B561 PF03188.16 ORF30468 - 5e-05 23.5 10.2 0.00012 22.2 10.2 1.6 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 CDH-cyt PF16010.5 ORF30468 - 0.0014 18.3 0.0 0.0035 17.1 0.0 1.6 1 0 0 1 1 1 1 Cytochrome domain of cellobiose dehydrogenase NAD_binding_1 PF00175.21 ORF30468 - 0.011 16.4 0.0 0.048 14.3 0.0 2.1 2 1 0 2 2 2 0 Oxidoreductase NAD-binding domain Paz_1 PF18349.1 ORF30468 - 0.055 13.4 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 PAZ domain Kinesin PF00225.23 ORF88588 - 6.2e-115 383.7 0.6 6.2e-115 383.7 0.6 2.7 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF88588 - 3.4e-26 92.0 0.2 3.4e-26 92.0 0.2 2.7 2 1 0 2 2 2 1 Microtubule binding RII_binding_1 PF10522.9 ORF88588 - 0.043 14.0 0.1 0.19 12.0 0.1 2.2 1 0 0 1 1 1 0 RII binding domain Kinesin PF00225.23 ORF73498 - 6.2e-115 383.7 0.6 6.2e-115 383.7 0.6 2.7 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF73498 - 3.4e-26 92.0 0.2 3.4e-26 92.0 0.2 2.7 2 1 0 2 2 2 1 Microtubule binding RII_binding_1 PF10522.9 ORF73498 - 0.043 14.0 0.1 0.19 12.0 0.1 2.2 1 0 0 1 1 1 0 RII binding domain Baculo_PEP_C PF04513.12 ORF4467 - 6.9e-09 35.9 50.7 0.00077 19.5 2.3 7.0 4 3 3 7 7 7 3 Baculovirus polyhedron envelope protein, PEP, C terminus Fib_alpha PF08702.10 ORF4467 - 3.2e-07 30.6 63.2 0.00023 21.4 7.3 7.0 5 1 1 6 6 6 4 Fibrinogen alpha/beta chain family DUF4795 PF16043.5 ORF4467 - 4.3e-06 26.5 93.5 0.0005 19.7 10.7 6.7 2 2 0 3 3 3 1 Domain of unknown function (DUF4795) XhlA PF10779.9 ORF4467 - 7.9e-05 22.8 6.3 7.9e-05 22.8 6.3 11.6 8 5 5 13 13 10 3 Haemolysin XhlA APG17 PF04108.12 ORF4467 - 9.3e-05 21.7 9.2 9.3e-05 21.7 9.2 5.4 2 2 1 4 4 4 1 Autophagy protein Apg17 CorA PF01544.18 ORF4467 - 0.00027 20.4 7.2 0.00027 20.4 7.2 5.9 2 1 5 7 7 7 2 CorA-like Mg2+ transporter protein DUF1664 PF07889.12 ORF4467 - 0.00043 20.3 58.1 0.12 12.4 1.3 7.9 6 2 1 7 7 7 2 Protein of unknown function (DUF1664) TMPIT PF07851.13 ORF4467 - 0.00058 19.2 46.1 0.032 13.5 3.0 6.2 4 1 2 6 6 6 3 TMPIT-like protein DUF4618 PF15397.6 ORF4467 - 0.00062 19.3 0.9 0.00062 19.3 0.9 7.7 6 2 2 8 8 8 2 Domain of unknown function (DUF4618) AAA_13 PF13166.6 ORF4467 - 0.0014 17.4 62.9 0.0017 17.1 13.4 4.5 3 1 1 4 4 4 1 AAA domain APG6_N PF17675.1 ORF4467 - 0.0018 18.8 3.7 0.0018 18.8 3.7 6.8 4 2 2 6 6 5 1 Apg6 coiled-coil region DUF2935 PF11155.8 ORF4467 - 0.0037 17.6 7.2 52 4.2 4.1 5.5 3 2 0 3 3 3 0 Domain of unknown function (DUF2935) Tropomyosin_1 PF12718.7 ORF4467 - 0.006 16.7 86.1 0.0076 16.4 15.2 6.1 3 2 1 5 5 5 2 Tropomyosin like SHE3 PF17078.5 ORF4467 - 0.0069 16.1 9.3 0.0069 16.1 9.3 5.8 2 1 2 4 4 4 1 SWI5-dependent HO expression protein 3 GrpE PF01025.19 ORF4467 - 0.0094 15.6 76.9 0.052 13.2 5.9 7.5 4 2 2 6 6 6 2 GrpE Fez1 PF06818.15 ORF4467 - 0.015 15.7 12.7 0.015 15.7 12.7 5.5 1 1 2 4 4 3 0 Fez1 Occludin_ELL PF07303.13 ORF4467 - 0.02 15.6 5.7 0.02 15.6 5.7 7.8 6 2 1 7 7 6 0 Occludin homology domain HD_4 PF13328.6 ORF4467 - 0.037 13.8 0.9 4.1 7.1 0.2 3.0 3 0 0 3 3 2 0 HD domain Spc7 PF08317.11 ORF4467 - 0.043 12.7 88.1 0.11 11.4 6.8 6.2 1 1 5 6 6 6 0 Spc7 kinetochore protein MscS_porin PF12795.7 ORF4467 - 0.056 13.0 64.3 0.017 14.7 5.8 6.5 4 2 2 6 6 6 0 Mechanosensitive ion channel porin domain PspA_IM30 PF04012.12 ORF4467 - 0.068 12.7 44.0 0.02 14.5 3.0 6.3 4 2 1 5 5 5 0 PspA/IM30 family DUF948 PF06103.11 ORF4467 - 0.078 13.2 0.2 0.078 13.2 0.2 8.2 5 3 1 6 6 6 0 Bacterial protein of unknown function (DUF948) Laminin_II PF06009.12 ORF4467 - 0.12 12.3 70.1 0.017 15.2 4.3 6.9 5 2 2 7 7 6 0 Laminin Domain II Exonuc_VII_L PF02601.15 ORF4467 - 0.17 11.4 51.6 1.8e+04 -28.9 51.5 5.4 1 1 0 1 1 0 0 Exonuclease VII, large subunit SlyX PF04102.12 ORF4467 - 0.22 12.2 0.1 0.22 12.2 0.1 9.6 8 3 1 9 9 8 0 SlyX Nup54 PF13874.6 ORF4467 - 0.23 11.6 42.3 5.1 7.2 2.8 7.8 4 3 1 6 6 6 0 Nucleoporin complex subunit 54 DUF4541 PF15074.6 ORF4467 - 0.28 11.8 4.0 0.56 10.8 1.2 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4541) Filament PF00038.21 ORF4467 - 0.31 10.6 69.6 0.0087 15.7 17.8 4.9 1 1 1 3 3 2 0 Intermediate filament protein DUF3584 PF12128.8 ORF4467 - 0.36 8.3 70.1 1.6 6.1 32.8 4.1 1 1 1 3 3 3 0 Protein of unknown function (DUF3584) Golgin_A5 PF09787.9 ORF4467 - 0.44 10.0 69.0 0.099 12.1 1.0 5.9 3 1 2 6 6 6 0 Golgin subfamily A member 5 WXG100 PF06013.12 ORF4467 - 0.6 10.4 19.4 13 6.1 0.1 7.3 7 1 0 7 7 7 0 Proteins of 100 residues with WXG ATG16 PF08614.11 ORF4467 - 0.92 9.7 79.0 0.83 9.9 3.0 6.5 3 2 3 6 6 6 0 Autophagy protein 16 (ATG16) ApoO PF09769.9 ORF4467 - 1.1 9.3 13.7 2.6 8.0 0.0 6.2 5 3 2 7 7 6 0 Apolipoprotein O Tropomyosin PF00261.20 ORF4467 - 1.2 8.4 80.9 0.15 11.4 3.3 6.7 4 2 0 5 5 5 0 Tropomyosin Heme_oxygenase PF01126.20 ORF4467 - 1.6 8.5 6.5 0.43 10.3 1.6 2.5 2 0 0 2 2 2 0 Heme oxygenase DUF1978 PF09321.10 ORF4467 - 1.7 7.9 62.4 0.012 14.9 12.6 6.0 5 1 1 6 6 6 0 Domain of unknown function (DUF1978) MCPsignal PF00015.21 ORF4467 - 2.7 7.8 14.4 2.8 7.7 0.2 5.1 5 0 0 5 5 5 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF16 PF01519.16 ORF4467 - 2.9 8.4 70.3 0.35 11.4 0.5 7.9 4 2 3 7 7 7 0 Protein of unknown function DUF16 DUF4407 PF14362.6 ORF4467 - 3.5 6.9 50.3 1.1e+02 2.0 11.6 4.8 1 1 2 3 3 2 0 Domain of unknown function (DUF4407) SesA PF17107.5 ORF4467 - 4.4 7.5 34.6 0.11 12.7 2.7 6.2 4 3 2 7 7 7 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Spectrin PF00435.21 ORF4467 - 4.4 7.8 64.2 0.28 11.7 2.7 7.3 3 2 1 6 6 6 0 Spectrin repeat Myosin_tail_1 PF01576.19 ORF4467 - 4.5 4.9 77.7 0.0095 13.8 16.0 4.0 2 1 0 4 4 4 0 Myosin tail COG2 PF06148.11 ORF4467 - 5.7 7.0 46.4 1.4 9.0 0.9 7.7 5 4 2 7 7 7 0 COG (conserved oligomeric Golgi) complex component, COG2 Lebercilin PF15619.6 ORF4467 - 6.1 6.5 85.5 0.34 10.5 20.1 7.2 5 3 0 5 5 5 0 Ciliary protein causing Leber congenital amaurosis disease FapA PF03961.13 ORF4467 - 7.9 5.0 77.7 0.39 9.3 4.8 6.4 1 1 5 6 6 5 0 Flagellar Assembly Protein A # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks6.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks6.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks6.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks6.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:26:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DEK_C PF08766.11 ORF3172 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain bZIP_1 PF00170.21 ORF29048 - 0.93 9.6 7.3 14 5.9 1.0 3.1 2 1 1 3 3 3 0 bZIP transcription factor DivIC PF04977.15 ORF29048 - 1.1 9.1 3.7 11 5.9 0.5 2.4 2 0 0 2 2 2 0 Septum formation initiator Holin_9 PF16936.5 ORF27877 - 0.055 13.6 0.5 0.13 12.4 0.5 1.7 1 0 0 1 1 1 0 Putative holin DEK_C PF08766.11 ORF22190 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain NHL PF01436.21 ORF21243 - 1.5e-27 94.2 4.4 4e-08 32.9 0.2 5.3 5 0 0 5 5 5 5 NHL repeat SGL PF08450.12 ORF21243 - 0.0012 18.5 0.0 0.0083 15.7 0.0 2.0 1 1 1 2 2 2 2 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 ORF21243 - 0.0081 16.3 0.0 37 4.5 0.0 3.9 3 1 1 4 4 4 1 Strictosidine synthase Fez1 PF06818.15 ORF1852 - 0.0084 16.6 8.3 0.14 12.6 3.9 2.2 2 0 0 2 2 2 2 Fez1 Mod_r PF07200.13 ORF1852 - 0.03 14.5 8.3 0.84 9.7 3.3 2.5 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein YyzF PF14116.6 ORF1852 - 0.061 13.4 0.0 0.34 11.0 0.0 2.3 1 0 0 1 1 1 0 YyzF-like protein FadA PF09403.10 ORF1852 - 0.15 12.6 16.7 0.24 11.9 9.5 2.6 2 0 0 2 2 2 0 Adhesion protein FadA DASH_Dad3 PF08656.10 ORF1852 - 0.23 11.6 7.0 2.4 8.3 0.4 3.2 3 1 0 3 3 3 0 DASH complex subunit Dad3 Spectrin PF00435.21 ORF1852 - 0.96 10.0 10.2 0.17 12.4 0.7 3.1 2 1 0 2 2 2 0 Spectrin repeat EMC3_TMCO1 PF01956.16 ORF1852 - 1.6 8.5 5.3 0.31 10.7 1.1 2.0 2 1 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like FapA PF03961.13 ORF1852 - 2.4 6.6 13.7 4 5.9 1.8 2.2 1 1 1 2 2 2 0 Flagellar Assembly Protein A CorA PF01544.18 ORF1852 - 2.5 7.3 7.9 3 7.1 1.2 2.7 2 1 1 3 3 3 0 CorA-like Mg2+ transporter protein Sec34 PF04136.15 ORF1852 - 3.3 7.6 16.2 4.7 7.1 0.8 3.2 3 1 0 3 3 3 0 Sec34-like family DUF5082 PF16888.5 ORF1852 - 3.4 8.0 9.8 0.34 11.2 1.0 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) DUF19 PF01579.18 ORF1852 - 3.9 7.3 12.6 0.75 9.6 4.4 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF19) IFT20 PF14931.6 ORF1852 - 9.1 6.5 19.4 19 5.4 7.3 3.9 1 1 2 3 3 3 0 Intraflagellar transport complex B, subunit 20 EF-hand_7 PF13499.6 ORF18267 - 2.3e-06 28.0 0.4 0.0017 18.8 0.2 2.3 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF18267 - 0.0067 15.9 0.0 0.036 13.6 0.0 2.2 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF18267 - 0.039 13.9 0.0 0.2 11.7 0.0 2.0 2 0 0 2 2 2 0 EF-hand domain WD40 PF00400.32 ORF16021 - 9.5e-45 149.7 10.5 1.3e-07 32.2 0.0 7.1 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF16021 - 4.7e-15 55.7 0.5 0.00015 22.0 0.0 4.2 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 ORF16021 - 1.9e-09 36.9 4.8 0.078 11.9 0.1 4.8 1 1 3 5 5 5 4 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 ORF16021 - 2.1e-09 36.6 5.9 0.0071 15.0 0.0 5.4 3 1 2 6 6 6 4 Nucleoporin Nup120/160 eIF2A PF08662.11 ORF16021 - 7e-07 29.3 0.0 0.00015 21.7 0.0 2.7 2 1 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A PQQ_2 PF13360.6 ORF16021 - 0.00015 21.5 3.9 0.0005 19.7 1.0 2.1 2 0 0 2 2 2 1 PQQ-like domain DUF1513 PF07433.11 ORF16021 - 0.0027 16.9 1.2 2.8 7.0 0.0 3.1 2 2 0 3 3 3 2 Protein of unknown function (DUF1513) PD40 PF07676.12 ORF16021 - 0.039 13.9 1.4 1.7 8.7 0.0 3.5 4 0 0 4 4 4 0 WD40-like Beta Propeller Repeat WD40_like PF17005.5 ORF16021 - 0.15 11.4 0.0 22 4.3 0.0 2.7 3 0 0 3 3 3 0 WD40-like domain Cytochrom_D1 PF02239.16 ORF16021 - 0.17 10.4 0.1 5 5.6 0.0 2.2 1 1 1 2 2 2 0 Cytochrome D1 heme domain DUF1283 PF06932.11 ORF16021 - 0.99 9.6 2.9 59 4.0 0.1 4.2 5 0 0 5 5 5 0 Protein of unknown function (DUF1283) DEK_C PF08766.11 ORF154 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain DEK_C PF08766.11 ORF152076 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 DEK C terminal domain Peptidase_C26 PF07722.13 ORF151891 - 4.6e-14 52.7 0.0 1.1e-13 51.4 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF151891 - 6.9e-08 32.5 0.0 1.2e-07 31.7 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I ECH_1 PF00378.20 ORF151613 - 1.7e-36 125.8 0.3 7.5e-36 123.7 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF151613 - 6.1e-23 81.8 0.2 1e-22 81.1 0.2 1.4 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase His_Phos_1 PF00300.22 ORF151042 - 2.3e-09 37.2 0.0 5.5e-08 32.7 0.0 2.5 2 1 0 2 2 2 1 Histidine phosphatase superfamily (branch 1) COMPASS-Shg1 PF05205.12 ORF151042 - 0.13 13.0 2.8 0.32 11.7 0.5 2.3 2 1 1 3 3 3 0 COMPASS (Complex proteins associated with Set1p) component shg1 Alg6_Alg8 PF03155.15 ORF150438 - 0.031 13.3 0.2 0.045 12.7 0.2 1.2 1 0 0 1 1 1 0 ALG6, ALG8 glycosyltransferase family DUF1275 PF06912.11 ORF149830 - 3.8e-22 79.1 11.4 3.8e-22 79.1 11.4 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1275) LUC7 PF03194.15 ORF14980 - 3.7e-38 131.6 15.5 5.9e-38 131.0 15.5 1.3 1 0 0 1 1 1 1 LUC7 N_terminus Baculo_PEP_C PF04513.12 ORF14980 - 0.076 13.1 2.5 0.65 10.0 1.2 2.4 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Glyco_hydro_80 PF13647.6 ORF14980 - 0.091 12.2 0.1 0.14 11.6 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 80 of chitosanase A Apolipoprotein PF01442.18 ORF14980 - 0.13 12.1 8.2 0.82 9.5 8.2 2.2 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain YtxH PF12732.7 ORF14980 - 0.26 11.8 9.6 0.72 10.4 2.4 3.3 2 1 1 3 3 3 0 YtxH-like protein Atypical_Card PF18461.1 ORF14980 - 0.33 11.2 2.4 0.46 10.7 0.8 2.0 2 0 0 2 2 2 0 Atypical caspase recruitment domain RGS-like PF09128.11 ORF14980 - 0.52 10.0 10.2 0.12 12.0 5.4 2.0 1 1 1 2 2 2 0 Regulator of G protein signalling-like domain DUF883 PF05957.13 ORF14980 - 4.5 7.9 7.4 11 6.7 0.2 3.2 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) Tup_N PF08581.10 ORF148413 - 0.17 12.2 0.5 0.17 12.2 0.5 2.2 1 1 1 2 2 2 0 Tup N-terminal Golgin_A5 PF09787.9 ORF148413 - 0.18 11.3 10.6 0.23 10.9 10.6 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF2408 PF10303.9 ORF148413 - 0.64 10.6 5.1 2.5 8.7 5.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) DUF883 PF05957.13 ORF148413 - 0.94 10.1 5.3 1.9 9.2 5.1 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Nup54 PF13874.6 ORF148413 - 1.5 8.9 12.1 4.4 7.4 12.1 1.7 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 TMPIT PF07851.13 ORF148413 - 2.9 7.0 5.5 3.8 6.7 5.5 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF454 PF04304.13 ORF147038 - 0.0037 17.3 0.9 0.0097 15.9 0.9 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF454) ECH_1 PF00378.20 ORF146434 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF146434 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase PhoLip_ATPase_C PF16212.5 ORF1424 - 7.5e-40 137.2 31.9 9.6e-40 136.9 31.9 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal DUF2070 PF09843.9 ORF1424 - 0.11 10.8 11.0 0.13 10.6 11.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) WD40 PF00400.32 ORF141302 - 2e-12 47.4 11.8 1.6e-06 28.7 0.0 5.1 5 1 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF141302 - 2.6e-07 30.8 0.0 0.3 11.4 0.0 3.4 3 0 0 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Gmad1 PF10647.9 ORF141302 - 0.0047 16.7 0.1 0.11 12.3 0.1 2.1 2 0 0 2 2 2 1 Lipoprotein LpqB beta-propeller domain DUF1275 PF06912.11 ORF136715 - 3.8e-22 79.1 11.4 3.8e-22 79.1 11.4 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1275) JIP_LZII PF16471.5 ORF13638 - 0.006 16.7 3.5 0.006 16.7 3.5 2.1 2 0 0 2 2 2 1 JNK-interacting protein leucine zipper II YscO PF07321.12 ORF13638 - 0.03 14.3 3.1 0.055 13.4 3.1 1.3 1 0 0 1 1 1 0 Type III secretion protein YscO Laminin_II PF06009.12 ORF13638 - 0.14 12.2 3.5 0.1 12.6 1.5 1.8 2 0 0 2 2 2 0 Laminin Domain II HIP1_clath_bdg PF16515.5 ORF13638 - 0.14 12.8 4.7 0.36 11.4 4.6 1.8 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Tropomyosin_1 PF12718.7 ORF13638 - 0.16 12.1 9.0 0.3 11.2 9.0 1.5 1 0 0 1 1 1 0 Tropomyosin like DUF3450 PF11932.8 ORF13638 - 0.17 11.2 5.3 0.28 10.4 5.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DivIC PF04977.15 ORF13638 - 0.17 11.6 4.3 0.3 10.9 3.5 1.8 1 1 0 1 1 1 0 Septum formation initiator TMPIT PF07851.13 ORF13638 - 0.33 10.2 5.8 0.66 9.2 5.8 1.5 1 0 0 1 1 1 0 TMPIT-like protein RPW8 PF05659.11 ORF13638 - 0.34 10.6 10.1 0.17 11.5 6.8 2.1 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 MCPsignal PF00015.21 ORF13638 - 0.43 10.4 3.4 0.28 11.0 1.1 1.8 2 0 0 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF1664 PF07889.12 ORF13638 - 0.61 10.1 10.9 0.67 10.0 5.0 2.8 2 2 0 2 2 2 0 Protein of unknown function (DUF1664) DUF16 PF01519.16 ORF13638 - 7.2 7.2 12.7 5.3 7.6 7.2 2.8 2 1 0 2 2 2 0 Protein of unknown function DUF16 Peptidase_C97 PF05903.14 ORF134476 - 1.4e-20 73.7 0.0 2e-20 73.2 0.0 1.2 1 0 0 1 1 1 1 PPPDE putative peptidase domain ECH_1 PF00378.20 ORF129611 - 1.7e-32 112.8 0.0 4.7e-32 111.3 0.0 1.6 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF129611 - 6.3e-17 62.1 0.0 1.8e-16 60.6 0.0 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase KdgM PF06178.13 ORF129352 - 1.7e-91 305.8 10.2 2e-91 305.6 10.2 1.0 1 0 0 1 1 1 1 Oligogalacturonate-specific porin protein (KdgM) BBP2 PF07642.11 ORF129352 - 2.7e-05 23.5 6.4 0.00035 19.8 6.4 2.1 1 1 0 1 1 1 1 Putative beta-barrel porin-2, OmpL-like. bbp2 OMP_b-brl PF13505.6 ORF129352 - 0.056 13.6 7.7 1.1 9.4 7.7 2.3 1 1 0 1 1 1 0 Outer membrane protein beta-barrel domain Porin_OmpG PF09381.10 ORF129352 - 0.072 12.9 9.8 0.066 13.0 7.8 1.8 2 0 0 2 2 2 0 Outer membrane protein G (OmpG) Calreticulin PF00262.18 ORF126757 - 3e-29 102.0 0.6 8.3e-26 90.7 0.0 2.1 1 1 1 2 2 2 2 Calreticulin family Peptidase_C26 PF07722.13 ORF120832 - 4.6e-14 52.7 0.0 1.1e-13 51.4 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF120832 - 6.9e-08 32.5 0.0 1.2e-07 31.7 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C97 PF05903.14 ORF119980 - 1.4e-20 73.7 0.0 2e-20 73.2 0.0 1.2 1 0 0 1 1 1 1 PPPDE putative peptidase domain His_Phos_1 PF00300.22 ORF111437 - 2.3e-09 37.2 0.0 5.5e-08 32.7 0.0 2.5 2 1 0 2 2 2 1 Histidine phosphatase superfamily (branch 1) COMPASS-Shg1 PF05205.12 ORF111437 - 0.13 13.0 2.8 0.32 11.7 0.5 2.3 2 1 1 3 3 3 0 COMPASS (Complex proteins associated with Set1p) component shg1 PAP_central PF04928.17 ORF111022 - 0.00041 19.4 0.1 0.00069 18.7 0.1 1.3 1 0 0 1 1 1 1 Poly(A) polymerase central domain Nrap_D2 PF17403.2 ORF111022 - 0.00046 20.0 0.0 0.00074 19.3 0.0 1.3 1 0 0 1 1 1 1 Nrap protein PAP/OAS-like domain EF-hand_5 PF13202.6 ORF110917 - 1.7e-06 27.3 0.2 3e-06 26.5 0.2 1.4 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF110917 - 7.3e-05 22.4 0.1 0.00013 21.6 0.1 1.4 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF110917 - 0.00013 21.8 0.0 0.00026 20.8 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF110917 - 0.00018 20.8 0.0 0.00033 20.0 0.0 1.4 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF110917 - 0.0054 17.2 0.0 0.0091 16.4 0.0 1.3 1 0 0 1 1 1 1 EF-hand domain pair Neisseria_TspB PF05616.13 ORF110917 - 0.31 9.5 1.3 0.42 9.0 1.3 1.1 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein GRDP-like PF07173.12 ORF110595 - 0.00053 20.7 4.7 0.0043 17.7 1.7 2.6 1 1 1 2 2 2 2 Glycine-rich domain-containing protein-like Laps PF10169.9 ORF110595 - 0.22 12.1 3.3 0.19 12.3 1.8 1.7 1 1 1 2 2 2 0 Learning-associated protein GDA1_CD39 PF01150.17 ORF109387 - 5.5e-13 48.4 0.0 6.8e-12 44.8 0.0 2.1 1 1 0 1 1 1 1 GDA1/CD39 (nucleoside phosphatase) family DUF3995 PF13160.6 ORF109387 - 0.082 13.3 1.7 0.13 12.6 0.6 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3995) Penaeidin PF05927.11 ORF109387 - 0.17 12.7 3.4 0.13 13.0 1.4 1.9 2 0 0 2 2 2 0 Penaeidin ECH_1 PF00378.20 ORF108816 - 1.4e-36 126.1 0.3 6.3e-36 124.0 0.3 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF108816 - 5.6e-23 82.0 0.3 9.1e-23 81.3 0.3 1.3 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DUF1582 PF07621.11 ORF104011 - 0.19 11.7 0.3 0.19 11.7 0.3 4.3 6 0 0 6 6 6 0 Protein of unknown function (DUF1582) Inositol_P PF00459.25 NODE_24933_length_841_cov_2.965261_g19434_i0reverse_frame_1 - 2.4e-38 132.2 0.1 3e-38 131.9 0.1 1.1 1 0 0 1 1 1 1 Inositol monophosphatase family Alpha-mann_mid PF09261.11 NODE_24908_length_841_cov_723.686104_g19412_i0forward_frame_1 - 0.00042 20.4 0.0 0.00083 19.5 0.0 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain FAS_meander PF17951.1 NODE_24908_length_841_cov_723.686104_g19412_i0forward_frame_1 - 0.15 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 Fatty acid synthase meander beta sheet domain Alpha-mann_mid PF09261.11 NODE_24906_length_841_cov_754.258065_g19411_i0forward_frame_1 - 0.00015 21.9 0.0 0.00029 20.9 0.0 1.4 1 0 0 1 1 1 1 Alpha mannosidase middle domain FAS_meander PF17951.1 NODE_24906_length_841_cov_754.258065_g19411_i0forward_frame_1 - 0.16 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 Fatty acid synthase meander beta sheet domain OKR_DC_1 PF01276.20 NODE_24858_length_843_cov_3.873762_g19371_i0forward_frame_1 - 6.8e-127 423.7 0.1 7.6e-127 423.5 0.1 1.0 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain DUF89 PF01937.19 NODE_24858_length_843_cov_3.873762_g19371_i0forward_frame_1 - 0.059 12.3 0.0 0.085 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF89 Bacteriocin_IId PF09221.10 NODE_24824_length_844_cov_67.782447_g19344_i0forward_frame_3 - 0.023 14.8 0.2 0.035 14.3 0.2 1.2 1 0 0 1 1 1 0 Bacteriocin class IId cyclical uberolysin-like YwcE PF17368.2 NODE_24802_length_844_cov_204.400494_g19323_i0reverse_frame_3 - 1.3 9.8 9.4 1.4 9.6 2.5 2.6 2 0 0 2 2 2 0 Spore morphogenesis and germination YwcE CIAPIN1 PF05093.13 NODE_24802_length_844_cov_204.400494_g19323_i0reverse_frame_2 - 0.22 12.1 1.4 0.72 10.4 0.0 2.1 2 0 0 2 2 2 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis CaiF_GrlA PF07180.11 NODE_24802_length_844_cov_204.400494_g19323_i0forward_frame_3 - 0.11 12.4 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 CaiF/GrlA transcriptional regulator RRM_1 PF00076.22 NODE_24793_length_844_cov_374.443758_g19254_i1reverse_frame_2 - 1.6e-18 66.3 0.0 4.4e-18 64.9 0.0 1.8 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_24793_length_844_cov_374.443758_g19254_i1reverse_frame_2 - 0.00067 19.7 0.4 0.0091 16.1 0.0 2.6 1 1 1 2 2 2 1 RNA recognition motif DUF4692 PF15763.5 NODE_24793_length_844_cov_374.443758_g19254_i1reverse_frame_2 - 9.6 6.7 10.7 18 5.8 10.7 1.4 1 0 0 1 1 1 0 Regulator of human erythroid cell expansion (RHEX) RRM_1 PF00076.22 NODE_24722_length_846_cov_373.524044_g19254_i0reverse_frame_2 - 1.7e-18 66.2 0.0 4.4e-18 64.9 0.0 1.8 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_24722_length_846_cov_373.524044_g19254_i0reverse_frame_2 - 0.00064 19.8 0.4 0.0091 16.1 0.0 2.6 1 1 1 2 2 2 1 RNA recognition motif Glyco_hydro_3_C PF01915.22 ORF99822 - 5.8e-15 55.8 0.0 7.6e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 ORF99822 - 2.7e-10 40.2 0.0 5.3e-10 39.3 0.0 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain OATP PF03137.20 ORF99822 - 0.059 11.6 0.0 0.081 11.2 0.0 1.1 1 0 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family UL21a PF17636.2 ORF99822 - 0.1 12.6 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Viral Unique Long protein 21a DUF3953 PF13129.6 ORF94514 - 0.023 14.4 0.9 0.06 13.1 0.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3953) Redoxin PF08534.10 ORF91259 - 5e-23 81.5 0.0 7.5e-23 80.9 0.0 1.2 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 ORF91259 - 2.9e-15 56.3 0.0 3.9e-15 55.9 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_2 PF13098.6 ORF91259 - 3.2e-06 27.5 0.0 5.6e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF91259 - 7.4e-05 23.0 0.0 0.00015 22.0 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 ORF91259 - 0.0003 20.7 0.0 0.00079 19.4 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 ORF91259 - 0.0037 17.4 0.1 0.0075 16.4 0.1 1.4 1 0 0 1 1 1 1 Thioredoxin-like Na_trans_assoc PF06512.13 ORF91259 - 3.3 7.9 7.2 5.4 7.2 7.2 1.5 1 1 0 1 1 1 0 Sodium ion transport-associated ABC_tran PF00005.27 ORF84712 - 9.5e-29 100.7 0.0 1.3e-28 100.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF84712 - 3e-08 33.8 0.0 0.0033 17.3 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 ORF84712 - 0.00055 19.9 0.0 0.0008 19.4 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 ORF84712 - 0.0014 18.2 0.1 0.0055 16.3 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF84712 - 0.0014 19.0 0.0 0.0019 18.6 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 ORF84712 - 0.0033 16.3 2.5 0.52 9.1 0.3 2.5 2 1 1 3 3 3 2 Predicted ATPase of the ABC class AAA_22 PF13401.6 ORF84712 - 0.0037 17.5 0.0 0.0068 16.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 ORF84712 - 0.0061 16.3 0.0 0.012 15.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 ORF84712 - 0.023 15.2 0.6 0.032 14.7 0.6 1.1 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF84712 - 0.027 14.2 0.0 0.041 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF84712 - 0.028 14.7 0.2 1.2 9.3 0.2 2.5 1 1 0 1 1 1 0 AAA domain AAA_3 PF07726.11 ORF84712 - 0.034 14.0 0.0 0.075 12.9 0.0 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 ORF84712 - 0.11 12.6 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF84712 - 0.11 12.4 0.1 0.18 11.7 0.1 1.3 1 0 0 1 1 1 0 NACHT domain AAA PF00004.29 ORF84712 - 0.14 12.6 0.0 0.4 11.1 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Alpha-amyl_C2 PF07821.12 ORF84387 - 5e-17 61.9 0.3 8.9e-17 61.1 0.3 1.4 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain Alpha-amylase PF00128.24 ORF84387 - 0.011 15.3 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Alpha amylase, catalytic domain InvH PF04741.12 ORF84108 - 0.054 13.4 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 InvH outer membrane lipoprotein SPC25 PF06703.11 ORF84108 - 8.2 6.2 10.5 0.15 11.8 2.5 2.1 2 0 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) Ank_2 PF12796.7 ORF7859 - 2.5e-05 24.8 0.0 0.048 14.2 0.0 3.1 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF7859 - 0.0018 18.5 1.6 6.3 7.2 0.1 3.8 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF7859 - 0.0072 16.9 0.0 11 6.7 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Lactate_perm PF02652.14 ORF71879 - 2.5e-92 310.3 13.7 3e-92 310.0 13.7 1.0 1 0 0 1 1 1 1 L-lactate permease WAPL PF07814.13 ORF71879 - 0.037 12.8 0.0 0.046 12.5 0.0 1.1 1 0 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin DUF4274 PF14096.6 ORF70526 - 0.23 11.5 2.6 0.2 11.7 0.5 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4274) Amidase_3 PF01520.18 ORF64710 - 0.0025 18.0 0.3 0.0025 18.0 0.3 2.2 2 0 0 2 2 2 1 N-acetylmuramoyl-L-alanine amidase RL10P_insert PF17777.1 ORF6189 - 4.3e-17 61.9 0.1 1.5e-16 60.1 0.0 1.9 2 0 0 2 2 2 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 ORF6189 - 5.7e-13 49.3 12.1 2.8e-12 47.1 12.3 2.0 2 0 0 2 2 2 1 60s Acidic ribosomal protein Ribosomal_L10 PF00466.20 ORF6189 - 7.5e-06 26.0 0.0 7.5e-06 26.0 0.0 2.0 2 0 0 2 2 2 1 Ribosomal protein L10 Ribonuc_L-PSP PF01042.21 ORF6189 - 0.01 15.8 0.0 0.023 14.7 0.0 1.7 1 0 0 1 1 1 0 Endoribonuclease L-PSP DUF3021 PF11457.8 ORF59255 - 0.02 15.2 6.9 0.03 14.7 6.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF2776 PF10951.8 ORF59255 - 0.051 12.8 4.6 0.072 12.3 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) TMEM208_SND2 PF05620.11 ORF59255 - 0.18 11.6 4.3 0.41 10.4 4.3 1.7 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 HA2 PF04408.23 ORF59255 - 0.29 11.4 2.3 0.34 11.2 0.5 2.0 1 1 1 2 2 2 0 Helicase associated domain (HA2) EOS1 PF12326.8 ORF59255 - 0.33 10.9 2.1 0.63 9.9 2.1 1.7 1 1 0 1 1 1 0 N-glycosylation protein DUF3086 PF11285.8 ORF59255 - 0.47 9.5 5.0 0.29 10.2 2.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3086) zf-C3HC4_3 PF13920.6 ORF56960 - 3.9e-07 29.8 11.0 8.6e-07 28.7 11.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF56960 - 3.9e-06 26.6 14.8 7.9e-06 25.6 14.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF56960 - 8.2e-06 26.1 13.7 8.2e-06 26.1 13.7 1.8 2 0 0 2 2 2 1 Ring finger domain Prok-RING_4 PF14447.6 ORF56960 - 7.9e-05 22.4 16.3 8.3e-05 22.4 12.8 2.5 2 1 1 3 3 3 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF56960 - 0.00079 19.5 13.6 0.0028 17.8 13.8 1.9 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 ORF56960 - 0.0021 17.9 14.5 0.005 16.7 14.5 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF56960 - 0.017 15.1 15.0 0.13 12.2 15.0 2.4 1 1 1 2 2 2 0 zinc-RING finger domain zf-rbx1 PF12678.7 ORF56960 - 0.029 14.7 11.3 0.12 12.7 11.3 2.1 1 1 0 1 1 1 0 RING-H2 zinc finger domain TaqI_C PF12950.7 ORF56960 - 0.034 14.2 0.2 0.061 13.4 0.2 1.5 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain zf-RING_UBOX PF13445.6 ORF56960 - 0.072 13.1 12.5 0.42 10.7 12.5 2.3 1 1 0 1 1 1 0 RING-type zinc-finger Rtf2 PF04641.12 ORF56960 - 0.73 9.1 7.5 0.34 10.2 5.3 1.6 2 0 0 2 2 2 0 Rtf2 RING-finger zf-B_box PF00643.24 ORF56960 - 0.89 9.8 12.4 0.12 12.5 7.2 2.1 2 0 0 2 2 2 0 B-box zinc finger FYVE PF01363.21 ORF56960 - 2.3 8.4 12.5 4.8 7.4 12.5 1.6 1 0 0 1 1 1 0 FYVE zinc finger DUF2970 PF11174.8 ORF52593 - 0.014 15.3 0.0 0.025 14.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2970) YojJ PF10372.9 ORF52593 - 0.071 13.2 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial membrane-spanning protein N-terminus HIG_1_N PF04588.13 ORF52592 - 0.062 13.5 0.0 0.14 12.4 0.0 1.5 1 0 0 1 1 1 0 Hypoxia induced protein conserved region PRANC PF09372.10 ORF4429 - 2 8.8 5.1 8.9 6.7 0.0 3.3 2 2 1 3 3 3 0 PRANC domain DUF4296 PF14129.6 ORF43427 - 0.045 14.3 1.2 0.58 10.8 0.2 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4296) Sec20 PF03908.13 ORF43427 - 0.13 12.2 4.8 0.75 9.8 0.1 2.9 2 1 0 2 2 2 0 Sec20 DnaI_N PF07319.11 ORF43427 - 0.23 12.1 6.0 0.91 10.2 0.2 3.1 2 2 1 3 3 3 0 Primosomal protein DnaI N-terminus Peptidase_M3_N PF08439.10 ORF43427 - 0.32 11.3 0.2 0.32 11.3 0.2 3.0 3 0 0 3 3 3 0 Oligopeptidase F PET PF06297.14 ORF43427 - 0.37 11.1 1.7 0.52 10.7 0.1 2.0 2 0 0 2 2 2 0 PET Domain Spc7 PF08317.11 ORF43427 - 0.39 9.6 20.2 0.28 10.0 6.0 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein Allexi_40kDa PF05549.11 ORF43427 - 2.6 7.5 7.1 0.51 9.8 1.9 2.1 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF1002 PF06207.11 ORF43427 - 3.5 7.1 13.6 0.34 10.4 3.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1002) GIDA_assoc PF13932.6 ORF31161 - 0.091 12.9 3.4 0.28 11.3 0.4 2.1 2 0 0 2 2 2 0 GidA associated domain TMEM107 PF14995.6 ORF26461 - 3e-14 53.5 10.9 4.5e-14 52.9 10.9 1.3 1 0 0 1 1 1 1 Transmembrane protein DUF4220 PF13968.6 ORF26461 - 0.5 9.7 6.0 0.73 9.2 6.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4220) DUF2518 PF10726.9 ORF26461 - 8.9 6.0 10.6 27 4.4 0.1 2.3 1 1 1 2 2 2 0 Protein of function (DUF2518) Tho1_MOS11_C PF18592.1 ORF21563 - 0.0032 17.2 0.2 2.7 7.9 0.4 2.6 2 0 0 2 2 2 2 Tho1/MOS11 C-terminal domain DUF2312 PF10073.9 ORF21563 - 0.045 13.4 0.5 0.21 11.3 0.2 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) Tnp_DNA_bind PF14706.6 ORF21563 - 0.066 13.1 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 Transposase DNA-binding Cellulase PF00150.18 ORF1815 - 8e-11 41.9 0.0 1.1e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) GUB_WAK_bind PF13947.6 ORF150252 - 1 10.2 6.3 2.7 8.8 0.4 2.7 2 1 0 2 2 2 0 Wall-associated receptor kinase galacturonan-binding S36_mt PF10937.8 ORF150252 - 2.7 9.6 7.2 23 6.6 0.0 2.7 2 1 0 2 2 2 0 Ribosomal protein S36, mitochondrial Transket_pyr PF02779.24 ORF149096 - 6e-36 123.8 0.1 9.5e-36 123.1 0.1 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 ORF149096 - 6.4e-28 97.1 0.0 9.6e-28 96.6 0.0 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain PFOR_II PF17147.4 ORF149096 - 0.12 12.7 0.0 0.3 11.4 0.0 1.6 1 0 0 1 1 1 0 Pyruvate:ferredoxin oxidoreductase core domain II CTP_transf_like PF01467.26 ORF147367 - 1.4e-27 96.6 0.1 2.2e-27 96.0 0.1 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 ORF147367 - 0.016 15.1 0.1 0.029 14.2 0.1 1.4 1 0 0 1 1 1 0 FAD synthetase HIGH_NTase1 PF05636.11 ORF147367 - 0.041 13.1 0.2 0.064 12.5 0.2 1.2 1 0 0 1 1 1 0 HIGH Nucleotidyl Transferase zf-UBR PF02207.20 ORF146399 - 2.4 8.4 8.2 3.3 7.9 1.8 2.8 3 0 0 3 3 3 0 Putative zinc finger in N-recognin (UBR box) DnaJ PF00226.31 ORF140413 - 1.4e-10 41.2 0.1 2.8e-10 40.2 0.1 1.5 1 0 0 1 1 1 1 DnaJ domain Rhodanese PF00581.20 ORF140413 - 4e-09 37.0 0.0 7.1e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Rhodanese-like domain DUF3742 PF12553.8 ORF140335 - 0.032 14.3 0.6 0.07 13.3 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) Ca_chan_IQ PF08763.11 ORF140335 - 0.15 12.3 0.0 0.5 10.6 0.0 1.8 2 0 0 2 2 2 0 Voltage gated calcium channel IQ domain GLTT PF01744.20 ORF137570 - 0.027 14.2 1.1 0.1 12.4 1.0 2.0 1 1 0 1 1 1 0 GLTT repeat (6 copies) Methyltransf_23 PF13489.6 ORF137570 - 0.11 12.3 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain PQ-loop PF04193.14 ORF137258 - 1.2e-20 73.1 17.4 4.7e-12 45.5 0.7 2.9 3 0 0 3 3 3 2 PQ loop repeat ROK PF00480.20 ORF133246 - 8.7e-37 127.2 0.2 1e-36 127.0 0.2 1.1 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 ORF133246 - 0.0024 16.9 0.9 0.0049 15.9 0.6 1.6 2 0 0 2 2 2 1 Glucokinase Tecti-min-caps PF09300.10 ORF133246 - 0.15 12.2 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Tectiviridae, minor capsid DUF3021 PF11457.8 ORF129504 - 0.02 15.2 6.9 0.03 14.7 6.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF2776 PF10951.8 ORF129504 - 0.051 12.8 4.6 0.072 12.3 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) TMEM208_SND2 PF05620.11 ORF129504 - 0.18 11.6 4.3 0.41 10.4 4.3 1.7 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 HA2 PF04408.23 ORF129504 - 0.32 11.3 2.5 1.1 9.6 2.5 2.0 1 1 0 1 1 1 0 Helicase associated domain (HA2) EOS1 PF12326.8 ORF129504 - 0.56 10.1 3.3 1.5 8.7 3.3 1.9 1 1 0 1 1 1 0 N-glycosylation protein DUF3086 PF11285.8 ORF129504 - 0.69 9.0 5.8 0.29 10.2 2.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3086) 2OG-FeII_Oxy_5 PF13759.6 ORF128671 - 2e-12 47.4 0.0 4.8e-11 43.0 0.0 2.3 1 1 0 1 1 1 1 Putative 2OG-Fe(II) oxygenase Cupin_2 PF07883.11 ORF128671 - 0.011 15.5 0.5 0.12 12.1 0.0 2.4 2 0 0 2 2 2 0 Cupin domain zf-C2H2_4 PF13894.6 ORF126348 - 5e-08 33.1 32.7 6.4e-05 23.5 2.6 4.8 5 0 0 5 5 5 3 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF126348 - 1.2e-07 31.8 36.9 2e-06 27.9 4.3 4.4 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF126348 - 4.5e-06 26.9 10.1 0.0011 19.3 3.4 4.2 5 0 0 5 5 5 2 Zinc-finger double domain zf-C2H2_11 PF16622.5 ORF126348 - 0.0049 16.6 0.6 0.0049 16.6 0.6 3.3 3 0 0 3 3 3 1 zinc-finger C2H2-type GAGA PF09237.11 ORF126348 - 0.034 14.0 2.0 2.9 7.8 0.3 2.5 2 0 0 2 2 2 0 GAGA factor zf-H2C2_5 PF13909.6 ORF126348 - 0.11 12.3 19.5 1.5 8.6 10.2 4.4 3 1 0 3 3 3 0 C2H2-type zinc-finger domain Rpr2 PF04032.16 ORF126348 - 0.28 11.5 6.7 0.52 10.6 5.3 2.2 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-C2H2_8 PF15909.5 ORF126348 - 0.63 10.4 8.9 0.12 12.7 4.0 2.2 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_2 PF12756.7 ORF126348 - 4.9 7.5 20.7 0.79 10.1 3.8 3.4 2 2 2 4 4 4 0 C2H2 type zinc-finger (2 copies) zf-BED PF02892.15 ORF126348 - 5.1 7.2 31.4 0.06 13.4 4.2 3.9 2 2 2 4 4 4 0 BED zinc finger DUF4296 PF14129.6 ORF124590 - 0.045 14.3 1.2 0.58 10.8 0.2 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4296) Sec20 PF03908.13 ORF124590 - 0.13 12.2 4.8 0.75 9.8 0.1 2.9 2 1 0 2 2 2 0 Sec20 DnaI_N PF07319.11 ORF124590 - 0.23 12.1 6.0 0.91 10.2 0.2 3.1 2 2 1 3 3 3 0 Primosomal protein DnaI N-terminus Peptidase_M3_N PF08439.10 ORF124590 - 0.32 11.3 0.2 0.32 11.3 0.2 3.0 3 0 0 3 3 3 0 Oligopeptidase F PET PF06297.14 ORF124590 - 0.37 11.1 1.7 0.52 10.7 0.1 2.0 2 0 0 2 2 2 0 PET Domain Spc7 PF08317.11 ORF124590 - 0.39 9.6 20.2 0.28 10.0 6.0 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein Allexi_40kDa PF05549.11 ORF124590 - 2.6 7.5 7.1 0.51 9.8 1.9 2.1 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF1002 PF06207.11 ORF124590 - 3.5 7.1 13.6 0.34 10.4 3.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1002) FMO-like PF00743.19 ORF121115 - 9.2e-18 63.9 0.0 1.4e-15 56.7 0.0 2.1 1 1 1 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF121115 - 3.3e-05 23.3 0.0 5.4e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF121115 - 0.041 13.1 0.0 0.059 12.6 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase YgbB PF02542.16 ORF11802 - 5.3e-66 221.7 0.0 7.1e-66 221.3 0.0 1.2 1 0 0 1 1 1 1 YgbB family CytochromB561_N PF09786.9 ORF117107 - 0.053 12.5 0.1 0.078 12.0 0.1 1.2 1 0 0 1 1 1 0 Cytochrome B561, N terminal DUF1958 PF09211.10 ORF117107 - 0.065 13.6 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1958) WD40_alt PF14077.6 ORF1166 - 0.14 12.0 1.1 0.3 11.0 1.1 1.6 1 0 0 1 1 1 0 Alternative WD40 repeat motif CBM_1 PF00734.18 ORF113252 - 0.067 13.2 2.0 0.17 11.9 2.0 1.7 1 0 0 1 1 1 0 Fungal cellulose binding domain Fib_alpha PF08702.10 ORF113018 - 0.0046 17.1 10.2 0.0054 16.9 8.5 1.9 2 0 0 2 2 2 1 Fibrinogen alpha/beta chain family DUF16 PF01519.16 ORF113018 - 0.021 15.3 12.7 2.6 8.6 9.7 3.2 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF812 PF05667.11 ORF113018 - 0.4 9.5 23.3 0.55 9.0 23.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) AAA_13 PF13166.6 ORF113018 - 0.7 8.5 13.3 0.91 8.1 13.3 1.2 1 0 0 1 1 1 0 AAA domain Exonuc_VII_L PF02601.15 ORF113018 - 0.88 9.1 11.3 1.4 8.4 11.3 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit CENP-K PF11802.8 ORF113018 - 1.3 8.5 11.0 0.082 12.5 3.3 2.2 1 1 1 2 2 2 0 Centromere-associated protein K DUF3584 PF12128.8 ORF113018 - 1.5 6.3 26.4 2 5.8 26.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) CSN7a_helixI PF18392.1 ORF113018 - 2.4 8.1 6.2 10 6.1 0.1 2.8 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain CLZ PF16526.5 ORF113018 - 3.1 8.2 19.0 0.24 11.8 6.7 3.4 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ING PF12998.7 ORF113018 - 5.2 7.7 9.1 2.4 8.8 5.7 2.1 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding Peptidase_S46 PF10459.9 ORF113018 - 5.8 5.4 16.0 7 5.2 16.0 1.1 1 0 0 1 1 1 0 Peptidase S46 Spc7 PF08317.11 ORF113018 - 6.6 5.5 24.5 80 2.0 24.5 2.2 1 1 0 1 1 1 0 Spc7 kinetochore protein FUSC PF04632.12 ORF113018 - 8.1 4.8 21.7 0.74 8.3 11.9 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein family Pribosyltran PF00156.27 ORF111824 - 2e-05 24.2 0.0 3e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain DUF543 PF04418.12 ORF11061 - 1.4 9.0 5.4 6.1 6.9 0.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF543) MRI PF15325.6 ORF107639 - 3.9 8.6 8.6 0.17 13.0 1.7 2.1 2 1 1 3 3 3 0 Modulator of retrovirus infection Corona_nucleoca PF00937.18 ORF103868 - 0.56 9.2 4.3 1 8.4 4.3 1.4 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein BPD_transp_1 PF00528.22 ORF10215 - 2.2e-22 79.7 18.2 2.2e-22 79.7 18.2 2.1 1 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Aconitase PF00330.20 ORF10215 - 0.19 10.7 0.2 0.27 10.2 0.2 1.1 1 0 0 1 1 1 0 Aconitase family (aconitate hydratase) NodZ PF05830.11 ORF100250 - 0.083 11.7 0.1 0.13 11.1 0.1 1.3 1 0 0 1 1 1 0 Nodulation protein Z (NodZ) CENP-B_dimeris PF09026.10 NODE_25022_length_838_cov_13477.250311_g9198_i4forward_frame_1 - 0.0004 20.7 3.9 0.00068 20.0 3.9 1.3 1 0 0 1 1 1 1 Centromere protein B dimerisation domain RXT2_N PF08595.11 NODE_25022_length_838_cov_13477.250311_g9198_i4forward_frame_1 - 0.048 13.7 0.4 0.067 13.2 0.4 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal Nudix_N_2 PF14803.6 NODE_24950_length_840_cov_319.059627_g19445_i0reverse_frame_1 - 0.11 12.4 0.3 5.6 7.0 0.0 2.3 1 1 1 2 2 2 0 Nudix N-terminal Sucrose_synth PF00862.19 NODE_24950_length_840_cov_319.059627_g19445_i0forward_frame_1 - 0.032 12.5 0.0 0.037 12.3 0.0 1.2 1 0 0 1 1 1 0 Sucrose synthase Pinin_SDK_memA PF04696.13 NODE_24950_length_840_cov_319.059627_g19445_i0forward_frame_1 - 7.7 6.6 26.3 8.5 6.4 8.1 2.3 2 0 0 2 2 2 0 pinin/SDK/memA/ protein conserved region SpoU_methylase PF00588.19 NODE_24933_length_841_cov_2.965261_g19434_i0forward_frame_3 - 5.3e-14 52.6 0.0 8.6e-14 51.9 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family FGGY_C PF02782.16 NODE_24859_length_843_cov_3.360149_g19372_i0forward_frame_3 - 6.8e-46 156.5 0.2 9.4e-46 156.0 0.2 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.21 NODE_24859_length_843_cov_3.360149_g19372_i0forward_frame_3 - 0.012 15.2 0.0 0.016 14.7 0.0 1.2 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain AnmK PF03702.14 NODE_24859_length_843_cov_3.360149_g19372_i0forward_frame_3 - 0.033 13.3 0.0 0.047 12.8 0.0 1.2 1 0 0 1 1 1 0 Anhydro-N-acetylmuramic acid kinase HSP70 PF00012.20 NODE_24859_length_843_cov_3.360149_g19372_i0forward_frame_3 - 0.1 10.8 0.0 0.12 10.5 0.0 1.1 1 0 0 1 1 1 0 Hsp70 protein Torus PF16131.5 NODE_24856_length_843_cov_36.719059_g19369_i0forward_frame_2 - 0.015 15.9 0.6 0.039 14.6 0.1 2.0 2 0 0 2 2 2 0 Torus domain RRM_occluded PF16842.5 NODE_24856_length_843_cov_36.719059_g19369_i0forward_frame_2 - 0.05 13.5 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Occluded RNA-recognition motif zf-CCCH_2 PF14608.6 NODE_24856_length_843_cov_36.719059_g19369_i0forward_frame_2 - 0.17 12.4 1.0 0.47 11.0 1.0 1.8 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Imm32 PF15566.6 NODE_24855_length_843_cov_69.243812_g19368_i0reverse_frame_3 - 0.11 12.3 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 Immunity protein 32 Pec_lyase_N PF04431.13 NODE_24855_length_843_cov_69.243812_g19368_i0forward_frame_2 - 0.66 10.3 2.5 0.39 11.0 0.5 1.7 2 1 0 2 2 2 0 Pectate lyase, N terminus HPS6 PF15702.5 ORF99088 - 0.022 12.8 0.9 0.028 12.4 0.9 1.1 1 0 0 1 1 1 0 Hermansky-Pudlak syndrome 6 protein Asp PF00026.23 ORF99071 - 6.9e-32 111.1 0.0 8e-32 110.9 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF99071 - 0.0087 15.8 0.0 0.67 9.7 0.0 2.1 1 1 1 2 2 2 2 Xylanase inhibitor C-terminal CCDC92 PF14916.6 ORF97984 - 0.00071 19.3 0.6 0.0029 17.3 0.6 2.0 1 0 0 1 1 1 1 Coiled-coil domain of unknown function tRNA-synt_1c PF00749.21 ORF9483 - 5.1e-37 127.4 0.0 1e-36 126.4 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain HTH_15 PF12324.8 ORF9483 - 0.003 17.5 0.2 0.035 14.1 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of alkylmercury lyase Recep_L_domain PF01030.24 ORF94170 - 0.36 11.0 4.9 0.31 11.2 0.4 2.6 2 1 0 3 3 3 0 Receptor L domain TRAM_2 PF18693.1 ORF90554 - 1.3e-21 76.5 1.1 2.2e-21 75.8 1.1 1.4 1 0 0 1 1 1 1 TRAM domain Radical_SAM PF04055.21 ORF90554 - 2.8e-21 76.6 0.0 7.2e-21 75.3 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily TRAM PF01938.20 ORF90554 - 0.0015 18.5 0.1 0.0027 17.6 0.1 1.5 1 0 0 1 1 1 1 TRAM domain CoA_binding PF02629.19 ORF90554 - 0.11 13.2 0.0 13 6.6 0.0 2.4 1 1 1 2 2 2 0 CoA binding domain ACP_syn_III PF08545.10 ORF90554 - 0.19 11.6 0.0 0.41 10.5 0.0 1.5 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Snurportin1 PF11538.8 ORF90554 - 1 9.6 2.7 6.8 7.0 0.8 2.5 2 0 0 2 2 2 0 Snurportin1 Methyltransf_5 PF01795.19 ORF90291 - 1e-39 136.9 0.0 1.8e-39 136.1 0.0 1.4 1 1 0 1 1 1 1 MraW methylase family RCDG1 PF15725.5 ORF89326 - 0.71 10.3 7.5 0.088 13.2 2.8 1.9 2 0 0 2 2 2 0 Renal cancer differentiation gene 1 protein Cons_hypoth95 PF03602.15 ORF8361 - 0.00038 20.1 0.8 0.0008 19.1 0.8 1.5 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Mito_carr PF00153.27 ORF8282 - 8.7e-61 201.9 3.2 1.1e-22 79.7 0.3 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Alpha-amylase_C PF02806.18 ORF79267 - 5.7e-19 68.4 0.2 9.4e-19 67.7 0.2 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain DUF4309 PF14172.6 ORF79267 - 0.016 15.2 0.0 0.027 14.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) DNA_methylase PF00145.17 ORF79074 - 2.5e-28 99.4 0.0 6.9e-28 97.9 0.0 1.6 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase WW PF00397.26 ORF78974 - 2.2e-61 203.6 50.5 4.2e-14 52.3 3.0 6.1 6 0 0 6 6 6 6 WW domain Mustang PF15682.5 ORF78974 - 3.2e-07 30.4 11.5 2 8.6 0.1 5.2 5 0 0 5 5 5 4 Musculoskeletal, temporally activated-embryonic nuclear protein 1 Iron_transport PF10634.9 ORF78974 - 0.047 13.9 0.9 74 3.5 0.0 3.8 4 0 0 4 4 4 0 Fe2+ transport protein RtxA PF07634.11 ORF78974 - 0.051 14.1 1.5 1.1e+02 3.7 0.0 4.8 5 0 0 5 5 5 0 RtxA repeat Arm-DNA-bind_1 PF09003.10 ORF78974 - 0.19 11.9 2.6 22 5.3 0.0 3.6 4 0 0 4 4 4 0 Bacteriophage lambda integrase, Arm DNA-binding domain Mito_carr PF00153.27 ORF7392 - 4.8e-62 205.9 0.2 3.3e-23 81.4 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Fil_haemagg PF05594.14 ORF66672 - 0.069 13.7 50.8 1.8e+04 -16.5 50.8 3.6 1 1 0 1 1 1 0 Haemagluttinin repeat Trp_oprn_chp PF09534.10 ORF66672 - 5.2 6.8 37.8 5.2 6.8 8.5 2.6 1 1 2 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF4586 PF15239.6 ORF53634 - 2.9e-22 80.3 15.3 1.1e-21 78.4 15.3 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4586) DEK_C PF08766.11 ORF53498 - 8.4e-05 22.4 0.0 0.00014 21.7 0.0 1.3 1 0 0 1 1 1 1 DEK C terminal domain Tubulin PF00091.25 ORF53498 - 0.18 12.0 0.0 0.36 11.0 0.0 1.5 1 1 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain UDPGT PF00201.18 ORF50290 - 1.3e-17 63.8 0.0 2e-17 63.2 0.0 1.3 1 1 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_tran_28_C PF04101.16 ORF50290 - 5.5e-06 26.5 0.0 6.8e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 ORF50290 - 0.025 13.8 0.0 0.039 13.2 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 1 TMEM223 PF14640.6 ORF45730 - 0.017 15.3 0.1 0.077 13.2 0.1 2.1 1 1 0 1 1 1 0 Transmembrane protein 223 Androgen_recep PF02166.16 ORF43069 - 6.1 5.6 7.6 7.9 5.2 7.6 1.1 1 0 0 1 1 1 0 Androgen receptor adh_short PF00106.25 ORF36498 - 9.2e-33 113.3 0.7 1e-32 113.2 0.1 1.3 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF36498 - 3.8e-22 79.0 0.0 4.9e-22 78.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF36498 - 0.0025 17.8 0.0 0.0035 17.3 0.0 1.2 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 ORF36498 - 0.0045 16.7 0.0 0.0082 15.8 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.6 ORF36498 - 0.0074 16.2 0.1 0.014 15.3 0.1 1.4 1 0 0 1 1 1 1 NAD(P)H-binding Adenylsucc_synt PF00709.21 ORF36498 - 0.028 13.4 0.0 0.045 12.7 0.0 1.3 1 0 0 1 1 1 0 Adenylosuccinate synthetase 3HCDH_N PF02737.18 ORF36498 - 0.044 13.7 0.0 0.091 12.6 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Alpha-amylase_C PF02806.18 ORF34246 - 1.3e-20 73.7 0.2 2.1e-20 73.0 0.2 1.4 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain DUF4309 PF14172.6 ORF34246 - 0.011 15.7 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4309) BPD_transp_2 PF02653.16 ORF29273 - 3.7e-39 134.5 38.3 4.6e-39 134.2 38.3 1.1 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component WD40 PF00400.32 ORF28379 - 1.4e-14 54.2 4.4 0.04 14.8 0.1 5.4 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF28379 - 0.0028 17.9 0.0 1.6 9.1 0.0 2.9 3 0 0 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain DUF1513 PF07433.11 ORF28379 - 0.0052 15.9 0.2 0.027 13.6 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF1513) Nup160 PF11715.8 ORF28379 - 0.017 13.8 0.3 0.19 10.4 0.3 2.1 1 1 0 1 1 1 0 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF28379 - 0.13 11.0 0.0 12 4.5 0.0 2.3 1 1 1 2 2 2 0 Nup133 N terminal like Tenui_NS3 PF05310.12 ORF23167 - 0.52 10.4 3.4 0.95 9.5 3.4 1.4 1 0 0 1 1 1 0 Tenuivirus movement protein Peptidase_M50B PF13398.6 ORF18366 - 3.4e-07 30.1 1.4 3.4e-07 30.1 1.4 2.3 2 0 0 2 2 2 1 Peptidase M50B-like Peptidase_M50 PF02163.22 ORF18366 - 0.0013 18.0 5.3 0.0082 15.4 0.7 2.5 3 0 0 3 3 3 2 Peptidase family M50 zf_C2H2_13 PF18508.1 ORF18366 - 0.037 13.6 0.9 0.065 12.8 0.1 1.8 2 0 0 2 2 2 0 Zinc finger domain DUF3267 PF11667.8 ORF18366 - 0.1 12.9 0.2 0.1 12.9 0.2 3.0 2 1 2 4 4 4 0 Putative zincin peptidase Nop14 PF04147.12 ORF150534 - 2.6e-08 32.6 8.2 2.6e-08 32.6 8.2 2.0 1 1 1 2 2 2 1 Nop14-like family FAM184 PF15665.5 ORF150534 - 0.1 12.3 14.7 0.18 11.5 14.7 1.3 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B 5_nucleotid PF05761.14 ORF150534 - 0.53 9.1 7.6 0.77 8.6 7.6 1.1 1 0 0 1 1 1 0 5' nucleotidase family Toxin_20 PF08089.11 ORF150534 - 0.65 10.2 4.0 1.9 8.7 4.0 1.8 1 0 0 1 1 1 0 Huwentoxin-II family FapA PF03961.13 ORF150534 - 0.68 8.5 7.2 0.94 8.0 7.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A adh_short PF00106.25 ORF14958 - 5.8e-35 120.5 0.2 7.9e-35 120.1 0.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF14958 - 2.5e-22 79.6 0.0 3.2e-22 79.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF14958 - 0.00038 20.4 0.0 0.0005 20.0 0.0 1.2 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 ORF14958 - 0.0028 17.3 0.0 0.0051 16.5 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.6 ORF14958 - 0.0067 16.3 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding Adenylsucc_synt PF00709.21 ORF14958 - 0.01 14.8 0.1 0.015 14.3 0.1 1.2 1 0 0 1 1 1 0 Adenylosuccinate synthetase 3HCDH_N PF02737.18 ORF14958 - 0.038 13.9 0.0 0.068 13.1 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pkinase PF00069.25 ORF146965 - 2e-59 201.1 0.0 2.3e-59 200.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF146965 - 2.5e-39 135.1 0.0 3e-39 134.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF146965 - 0.00031 20.2 0.0 0.00065 19.1 0.0 1.5 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF146965 - 0.0063 16.5 0.0 1 9.2 0.0 2.7 2 1 1 3 3 3 2 Phosphotransferase enzyme family RIO1 PF01163.22 ORF146965 - 0.059 13.0 0.0 0.09 12.4 0.0 1.3 1 1 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF146965 - 0.21 10.9 0.0 0.32 10.3 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Fil_haemagg PF05594.14 ORF145509 - 0.069 13.7 50.8 1.8e+04 -16.5 50.8 3.6 1 1 0 1 1 1 0 Haemagluttinin repeat Trp_oprn_chp PF09534.10 ORF145509 - 5.2 6.8 37.8 5.2 6.8 8.5 2.6 1 1 2 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) ER_lumen_recept PF00810.18 ORF140951 - 3.1e-30 106.0 1.0 3.1e-30 106.0 1.0 2.0 2 0 0 2 2 2 1 ER lumen protein retaining receptor MRP-S32 PF10210.9 ORF137736 - 0.036 14.6 2.3 0.1 13.2 2.3 1.8 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S32 TFIIE-A_C PF11521.8 ORF13633 - 0.28 11.5 0.0 0.28 11.5 0.0 1.8 2 0 0 2 2 2 0 C-terminal general transcription factor TFIIE alpha ORC6 PF05460.13 ORF13633 - 0.92 8.7 4.8 1.1 8.4 4.8 1.3 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Aa_trans PF01490.18 ORF135419 - 5.5e-39 134.0 27.6 6.2e-39 133.9 27.6 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein PPR_2 PF13041.6 ORF13521 - 8.3e-39 131.6 0.0 4.5e-10 39.6 0.0 5.6 3 2 3 6 6 6 6 PPR repeat family PPR_3 PF13812.6 ORF13521 - 1.3e-32 111.7 0.0 7.6e-11 41.9 0.0 5.6 1 1 4 6 6 6 6 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF13521 - 1.5e-29 101.4 0.0 2.1e-06 27.3 0.0 7.3 6 1 1 7 7 7 7 PPR repeat PPR PF01535.20 ORF13521 - 1.5e-27 93.8 0.0 0.0066 16.6 0.0 7.0 7 0 0 7 7 7 6 PPR repeat PPR_long PF17177.4 ORF13521 - 3.1e-16 59.4 4.1 1.7e-07 30.8 0.2 3.7 1 1 2 3 3 3 2 Pentacotripeptide-repeat region of PRORP B12-binding_2 PF02607.17 ORF13521 - 0.055 13.9 2.8 9.4 6.8 1.1 3.7 2 1 1 3 3 3 0 B12 binding domain VWA_3 PF13768.6 ORF13521 - 0.14 12.1 1.9 1.3 9.0 0.1 2.5 2 1 0 2 2 2 0 von Willebrand factor type A domain TPR_14 PF13428.6 ORF13521 - 0.15 12.9 26.2 1.3 10.0 2.8 5.9 4 2 3 7 7 7 0 Tetratricopeptide repeat DUF3502 PF12010.8 ORF13521 - 0.17 12.5 0.1 1.6 9.4 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF3502) Wzy_C_2 PF11846.8 ORF13521 - 4.2 7.2 11.7 2.3 8.1 2.1 3.6 2 2 2 5 5 5 0 Virulence factor membrane-bound polymerase, C-terminal Androgen_recep PF02166.16 ORF133753 - 6.1 5.6 7.6 7.9 5.2 7.6 1.1 1 0 0 1 1 1 0 Androgen receptor RsmJ PF04378.13 ORF131267 - 4e-119 396.3 0.0 4.7e-119 396.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA large subunit methyltransferase D, RlmJ Cons_hypoth95 PF03602.15 ORF131267 - 0.0019 17.9 0.0 0.12 12.0 0.0 2.5 3 0 0 3 3 3 2 Conserved hypothetical protein 95 Podoplanin PF05808.11 ORF130265 - 3.9e-07 30.3 5.8 3.9e-07 30.3 5.8 1.8 1 1 0 1 1 1 1 Podoplanin Rax2 PF12768.7 ORF130265 - 0.00048 19.7 6.0 0.0034 16.9 6.0 2.4 1 1 0 1 1 1 1 Cortical protein marker for cell polarity Syndecan PF01034.20 ORF130265 - 0.00095 19.0 0.0 0.0021 18.0 0.0 1.5 1 0 0 1 1 1 1 Syndecan domain RIFIN PF02009.16 ORF130265 - 0.0015 18.5 0.1 0.0021 18.0 0.1 1.3 1 1 0 1 1 1 1 Rifin TMEM154 PF15102.6 ORF130265 - 0.0016 18.4 4.8 0.0078 16.1 4.9 2.1 1 1 0 1 1 1 1 TMEM154 protein family CD34_antigen PF06365.12 ORF130265 - 0.0027 17.3 0.7 0.018 14.6 0.1 2.1 1 1 1 2 2 2 1 CD34/Podocalyxin family DUF5305 PF17231.2 ORF130265 - 0.0029 17.1 2.5 0.0081 15.6 2.5 1.7 1 1 0 1 1 1 1 Family of unknown function (DUF5305) DUF5128 PF17170.4 ORF130265 - 0.0084 15.3 2.9 0.015 14.5 2.9 1.3 1 0 0 1 1 1 1 6-bladed beta-propeller Glycophorin_A PF01102.18 ORF130265 - 0.0088 16.3 0.1 0.022 15.0 0.1 1.7 1 1 0 1 1 1 1 Glycophorin A DUF2407_C PF13373.6 ORF130265 - 0.014 15.5 0.1 0.038 14.2 0.1 1.6 1 1 0 1 1 1 0 DUF2407 C-terminal domain Orf78 PF06024.12 ORF130265 - 0.033 14.5 0.1 0.099 13.0 0.0 1.8 1 1 0 1 1 1 0 Orf78 (ac78) DUF5325 PF17259.2 ORF130265 - 0.05 13.5 0.3 0.09 12.7 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5325) EphA2_TM PF14575.6 ORF130265 - 0.058 14.3 0.1 0.17 12.8 0.0 1.8 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain MtrF PF09472.10 ORF130265 - 0.12 11.8 0.6 0.28 10.6 0.6 1.6 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Cadherin_C_2 PF16492.5 ORF130265 - 0.82 10.5 0.0 0.82 10.5 0.0 3.0 3 1 0 3 3 3 0 Cadherin cytoplasmic C-terminal zf-RING_2 PF13639.6 ORF119655 - 7.8e-12 45.3 7.2 1.5e-11 44.5 7.2 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF119655 - 5.1e-09 35.7 5.8 1.2e-08 34.5 5.8 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF119655 - 5.9e-07 29.2 7.2 1.2e-06 28.2 7.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF119655 - 1.1e-06 28.8 8.2 1.1e-05 25.7 8.2 2.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF119655 - 5.6e-06 26.1 4.5 1.2e-05 25.1 4.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF119655 - 6.5e-06 25.9 8.5 1.4e-05 24.9 8.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF119655 - 1.5e-05 24.8 5.8 3e-05 23.9 5.8 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF119655 - 0.00026 21.0 3.7 0.0022 18.0 3.7 2.4 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_4 PF14570.6 ORF119655 - 0.00052 19.8 5.5 0.001 18.8 5.5 1.5 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-RING_UBOX PF13445.6 ORF119655 - 0.00061 19.7 6.3 0.0015 18.5 6.3 1.7 1 0 0 1 1 1 1 RING-type zinc-finger RINGv PF12906.7 ORF119655 - 0.012 15.7 6.6 0.024 14.7 6.6 1.5 1 0 0 1 1 1 0 RING-variant domain Rad50_zn_hook PF04423.14 ORF119655 - 0.038 13.8 0.1 0.038 13.8 0.1 2.0 3 0 0 3 3 1 0 Rad50 zinc hook motif CDC24_OB3 PF17244.2 ORF119655 - 0.052 13.2 1.3 0.087 12.5 1.3 1.3 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 Prok-RING_4 PF14447.6 ORF119655 - 0.06 13.2 4.2 0.11 12.4 4.2 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF119655 - 0.25 11.6 6.9 1.7 8.9 6.9 2.3 1 1 0 1 1 1 0 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 ORF119655 - 1.4 8.6 6.4 2.8 7.6 6.4 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type PPR_3 PF13812.6 ORF118549 - 1.8e-10 40.7 0.1 2.8e-05 24.1 0.0 4.7 3 2 2 5 5 5 3 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF118549 - 6.8e-09 35.8 1.0 0.016 15.4 0.0 4.6 3 2 2 5 5 5 3 PPR repeat family PPR PF01535.20 ORF118549 - 7.8e-09 35.2 6.1 0.13 12.6 0.1 4.9 5 0 0 5 5 5 3 PPR repeat PPR_long PF17177.4 ORF118549 - 1.4e-07 31.1 1.1 0.008 15.6 0.1 3.2 2 1 1 3 3 3 2 Pentacotripeptide-repeat region of PRORP KIAA1430 PF13879.6 ORF114855 - 7.6e-17 62.0 16.0 7.6e-17 62.0 16.0 2.4 2 1 0 2 2 2 1 KIAA1430 homologue CtaG_Cox11 PF04442.14 ORF114855 - 6.2 6.8 6.5 13 5.8 0.2 2.4 1 1 0 2 2 2 0 Cytochrome c oxidase assembly protein CtaG/Cox11 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks70.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks70.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks70.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks70.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:08 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ank_3 PF13606.6 ORF114359 - 0.0053 17.2 0.1 0.043 14.4 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Ank_2 PF12796.7 ORF114359 - 0.0065 17.0 0.0 0.22 12.2 0.0 2.4 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF114359 - 0.01 16.4 0.0 0.22 12.2 0.0 2.9 3 1 0 3 3 3 0 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF114359 - 0.13 12.6 0.0 0.38 11.1 0.0 1.8 1 0 0 1 1 1 0 Ankyrin repeats (many copies) RNA_polI_A14 PF08203.11 ORF114359 - 0.91 10.3 0.1 0.91 10.3 0.1 2.5 3 1 0 3 3 3 0 Yeast RNA polymerase I subunit RPA14 DUF1690 PF07956.11 ORF114359 - 4.6 7.7 9.8 0.22 11.9 3.8 1.8 2 0 0 2 2 2 0 Protein of Unknown function (DUF1690) TbpB_A PF17484.2 ORF114359 - 8.3 7.2 8.2 9.8 6.9 0.6 2.3 2 0 0 2 2 2 0 N-Lobe handle Tf-binding protein B DUF4714 PF15833.5 ORF112791 - 0.056 13.4 0.7 0.056 13.4 0.7 3.1 3 1 0 3 3 3 0 Domain of unknown function (DUF4714) Fil_haemagg PF05594.14 ORF110969 - 0.069 13.7 50.8 1.8e+04 -16.5 50.8 3.6 1 1 0 1 1 1 0 Haemagluttinin repeat Trp_oprn_chp PF09534.10 ORF110969 - 5.2 6.8 37.8 5.2 6.8 8.5 2.6 1 1 2 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Helicase_C PF00271.31 ORF109382 - 1.5e-19 70.3 0.0 2.4e-19 69.7 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 ORF109382 - 0.0075 15.5 0.0 0.0092 15.2 0.0 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Metallophos PF00149.28 ORF109158 - 3.4e-14 53.8 0.1 8.9e-14 52.5 0.1 1.8 1 1 1 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 ORF109158 - 0.00016 21.9 0.0 0.00023 21.4 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain FBPase_2 PF06874.11 ORF109158 - 0.12 10.7 0.1 0.22 9.8 0.1 1.4 1 1 1 2 2 2 0 Firmicute fructose-1,6-bisphosphatase TMEM223 PF14640.6 ORF106724 - 0.017 15.3 0.1 0.077 13.2 0.1 2.1 1 1 0 1 1 1 0 Transmembrane protein 223 Kinesin PF00225.23 ORF106108 - 3.3e-91 305.7 0.8 3.9e-91 305.4 0.8 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF106108 - 7.6e-05 22.7 0.0 0.00014 21.8 0.0 1.5 1 0 0 1 1 1 1 Microtubule binding Kinesin_assoc PF16183.5 ORF106108 - 0.024 14.8 0.8 0.12 12.5 0.0 2.1 2 0 0 2 2 2 0 Kinesin-associated HR1 PF02185.16 ORF106108 - 0.059 13.5 4.2 0.3 11.2 0.2 2.5 2 0 0 2 2 2 0 Hr1 repeat Barstar PF01337.18 ORF104204 - 0.064 13.3 0.2 0.32 11.0 0.1 2.3 2 0 0 2 2 2 0 Barstar (barnase inhibitor) DUF2407_C PF13373.6 ORF104204 - 0.093 12.9 1.0 0.18 12.0 1.0 1.4 1 0 0 1 1 1 0 DUF2407 C-terminal domain RecG_N PF17190.4 ORF104204 - 4 8.2 11.9 0.58 10.9 0.8 3.6 2 1 2 4 4 4 0 RecG N-terminal helical domain MatE PF01554.18 ORF100843 - 2.2e-18 66.4 6.2 8.4e-18 64.5 5.8 2.0 2 0 0 2 2 2 1 MatE VPDSG-CTERM PF18205.1 ORF100843 - 0.0085 15.9 0.1 0.034 13.9 0.1 2.1 1 0 0 1 1 1 1 VPDSG-CTERM motif DUF3792 PF12670.7 ORF100843 - 0.016 15.4 1.6 0.016 15.4 1.6 2.8 4 1 0 4 4 4 0 Protein of unknown function (DUF3792) RTT107_BRCT_5 PF16770.5 NODE_25186_length_835_cov_3.558750_g19642_i0reverse_frame_1 - 0.098 12.5 2.3 0.15 12.0 0.9 1.9 1 1 1 2 2 2 0 Regulator of Ty1 transposition protein 107 BRCT domain Pkinase PF00069.25 NODE_25149_length_836_cov_3.621723_g19612_i0forward_frame_1 - 4.8e-23 81.9 0.0 1.1e-22 80.7 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_25149_length_836_cov_3.621723_g19612_i0forward_frame_1 - 3.1e-05 23.4 0.3 7.8e-05 22.1 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase DUF848 PF05852.11 NODE_25128_length_836_cov_241.167291_g19592_i0reverse_frame_1 - 0.074 13.2 4.8 0.12 12.5 4.8 1.4 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) DUF1664 PF07889.12 NODE_25128_length_836_cov_241.167291_g19592_i0reverse_frame_1 - 0.14 12.2 2.9 0.23 11.5 2.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Jnk-SapK_ap_N PF09744.9 NODE_25128_length_836_cov_241.167291_g19592_i0reverse_frame_1 - 0.15 12.3 16.0 0.23 11.7 16.0 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 YlqD PF11068.8 NODE_25128_length_836_cov_241.167291_g19592_i0reverse_frame_1 - 0.44 10.9 8.8 0.72 10.2 8.8 1.2 1 0 0 1 1 1 0 YlqD protein FapA PF03961.13 NODE_25128_length_836_cov_241.167291_g19592_i0reverse_frame_1 - 2.3 6.8 4.5 3.2 6.3 4.5 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A TMPIT PF07851.13 NODE_25128_length_836_cov_241.167291_g19592_i0reverse_frame_1 - 2.3 7.4 6.6 3 7.0 6.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein CALM_bind PF16025.5 NODE_25128_length_836_cov_241.167291_g19592_i0reverse_frame_1 - 3.8 8.0 6.5 4.9 7.7 5.5 1.7 1 1 0 1 1 1 0 Calcium-dependent calmodulin binding IFP_35_N PF07334.13 NODE_25128_length_836_cov_241.167291_g19592_i0reverse_frame_1 - 3.9 7.6 8.3 11 6.2 0.4 2.5 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus MCU PF04678.13 NODE_25128_length_836_cov_241.167291_g19592_i0reverse_frame_1 - 6.8 6.8 6.4 9.9 6.2 6.4 1.2 1 0 0 1 1 1 0 Mitochondrial calcium uniporter Lyase_8_N PF08124.11 NODE_25107_length_837_cov_66.255611_g19576_i0forward_frame_1 - 0.049 12.5 0.9 0.096 11.6 0.9 1.4 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain ubiquitin PF00240.23 NODE_25099_length_837_cov_112.734414_g19570_i0reverse_frame_1 - 0.12 12.2 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family YliH PF10799.8 NODE_25099_length_837_cov_112.734414_g19570_i0forward_frame_1 - 0.053 13.4 0.1 0.13 12.2 0.1 1.7 1 0 0 1 1 1 0 Biofilm formation protein (YliH/bssR) Yippee-Mis18 PF03226.14 NODE_25062_length_838_cov_5.541719_g19537_i0reverse_frame_3 - 9.3e-06 25.8 3.4 3.6e-05 23.9 3.4 2.0 1 1 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF3888 PF13027.6 NODE_25022_length_838_cov_13477.250311_g9198_i4reverse_frame_3 - 0.0068 16.8 0.2 0.018 15.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3888) MBOAT_2 PF13813.6 ORF98761 - 1.2 9.4 6.1 0.46 10.8 0.9 2.5 1 1 2 3 3 3 0 Membrane bound O-acyl transferase family SelP_C PF04593.14 ORF97879 - 0.42 10.6 6.4 0.23 11.4 4.2 1.6 1 1 0 1 1 1 0 Selenoprotein P, C terminal region zf-C3HC4_3 PF13920.6 ORF9740 - 3.3e-15 55.7 13.1 7e-15 54.6 13.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF9740 - 1.1e-07 31.6 12.3 1.1e-07 31.6 12.3 1.9 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF9740 - 3.3e-06 27.3 13.6 9.9e-06 25.8 13.6 1.9 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF9740 - 0.00025 20.8 15.1 0.00053 19.8 15.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF9740 - 0.0009 19.1 12.0 0.0009 19.1 12.0 1.9 2 0 0 2 2 2 1 zinc-RING finger domain zf-P11 PF03854.14 ORF9740 - 0.043 13.5 10.2 0.1 12.3 10.2 1.6 1 0 0 1 1 1 0 P-11 zinc finger RNAse_A_bac PF18431.1 ORF96038 - 5.4 8.0 8.8 4.5 8.3 1.9 2.4 2 0 0 2 2 2 0 Bacterial CdiA-CT RNAse A domain Zn-ribbon_8 PF09723.10 ORF94879 - 0.029 14.5 2.2 0.07 13.3 2.2 1.7 1 0 0 1 1 1 0 Zinc ribbon domain DZR PF12773.7 ORF94879 - 0.052 13.6 2.1 0.14 12.2 2.1 1.7 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 ORF94879 - 0.14 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Fer4_11 PF13247.6 ORF94560 - 3.4e-29 100.9 10.8 3.4e-29 100.9 10.8 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF94560 - 1.8e-12 46.5 28.1 8.9e-05 22.4 2.6 4.7 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.27 ORF94560 - 3.7e-12 45.5 34.4 2.3e-07 30.3 4.7 5.8 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_9 PF13187.6 ORF94560 - 1.4e-11 44.3 23.9 1.5e-05 25.0 6.3 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF94560 - 1.5e-10 41.5 27.9 0.00014 22.4 11.4 3.6 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF94560 - 9.6e-10 38.1 44.1 3.5e-06 26.8 4.3 5.5 5 1 0 5 5 5 3 4Fe-4S binding domain Fer4_10 PF13237.6 ORF94560 - 3.8e-09 36.5 31.4 4.4e-05 23.5 12.1 3.8 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF94560 - 2e-05 25.2 43.4 0.01 16.7 5.5 5.1 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_4 PF12800.7 ORF94560 - 4.8e-05 23.5 41.0 0.0053 17.2 2.3 5.1 5 1 0 5 5 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 ORF94560 - 0.00032 21.1 5.4 0.00032 21.1 5.4 3.4 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF94560 - 0.00034 20.7 28.4 0.019 15.1 12.5 3.8 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_17 PF13534.6 ORF94560 - 0.0013 19.2 25.1 0.87 10.2 0.4 4.3 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF94560 - 0.0059 17.5 30.7 0.68 10.9 2.5 4.8 2 2 4 6 6 6 2 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 ORF94560 - 0.23 12.0 0.4 0.13 12.9 2.1 3.8 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 ORF94560 - 2 8.6 10.6 5.5 7.2 0.5 2.4 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S WD40 PF00400.32 ORF93174 - 4.2e-05 24.2 0.3 0.0086 16.9 0.1 3.4 4 0 0 4 4 4 1 WD domain, G-beta repeat CDC45 PF02724.14 ORF93174 - 0.011 14.1 5.2 0.013 13.9 5.2 1.1 1 0 0 1 1 1 0 CDC45-like protein Herpes_DNAp_acc PF04929.12 ORF93174 - 0.24 10.3 2.9 0.32 9.9 2.9 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor RNA_polI_A34 PF08208.11 ORF93174 - 0.49 10.5 19.4 0.69 10.0 19.4 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 Nop14 PF04147.12 ORF93174 - 0.53 8.4 12.3 0.61 8.2 12.3 1.0 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 ORF93174 - 3.6 6.9 18.6 4.5 6.6 18.6 1.1 1 0 0 1 1 1 0 SDA1 DUF3381 PF11861.8 ORF93174 - 4.9 6.9 15.8 7.2 6.4 15.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) Paf1 PF03985.13 ORF93174 - 7.9 5.4 17.0 10 5.0 17.0 1.1 1 0 0 1 1 1 0 Paf1 RNA_pol_Rpb2_6 PF00562.28 ORF87669 - 7.7e-69 232.6 0.3 2.8e-68 230.8 0.3 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 ORF87669 - 1.2e-24 86.5 0.0 2.4e-24 85.5 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 DHC_N2 PF08393.13 ORF87669 - 0.13 11.3 0.0 0.19 10.8 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 2 RHH_4 PF13467.6 ORF85697 - 0.033 14.1 0.1 0.08 12.8 0.1 1.7 1 0 0 1 1 1 0 Ribbon-helix-helix domain DUF5543 PF17697.1 ORF81455 - 0.028 14.7 1.0 0.084 13.2 1.0 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5543) DivIC PF04977.15 ORF80738 - 0.011 15.5 0.4 0.025 14.4 0.4 1.6 1 0 0 1 1 1 0 Septum formation initiator ZapB PF06005.12 ORF80738 - 0.062 13.8 2.0 0.15 12.5 2.0 1.6 1 0 0 1 1 1 0 Cell division protein ZapB Tcell_CD4_C PF12104.8 ORF80738 - 0.13 12.2 0.4 0.23 11.4 0.4 1.4 1 0 0 1 1 1 0 T cell CD4 receptor C terminal region Peptidase_A22B PF04258.13 ORF79058 - 1.5e-48 165.8 24.7 1.8e-48 165.5 24.7 1.0 1 0 0 1 1 1 1 Signal peptide peptidase DUF5426 PF17473.2 ORF79058 - 1.7 8.9 9.8 2.5 8.4 8.9 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5426) SelP_C PF04593.14 ORF77958 - 0.42 10.6 6.4 0.23 11.4 4.2 1.6 1 1 0 1 1 1 0 Selenoprotein P, C terminal region SHMT PF00464.19 ORF761 - 1.7e-59 201.4 0.0 2.1e-59 201.2 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 ORF761 - 0.00066 19.0 0.0 0.0008 18.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 ORF761 - 0.00067 18.9 0.0 0.0008 18.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Helicase_C PF00271.31 ORF73095 - 7.3e-27 93.9 0.1 3.3e-26 91.8 0.0 2.1 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF73095 - 1.2e-11 44.7 0.0 3.5e-10 39.9 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase NUC130_3NT PF08158.12 ORF73095 - 0.15 12.4 0.1 0.47 10.8 0.0 1.8 2 0 0 2 2 2 0 NUC130/3NT domain Sulfotransfer_2 PF03567.14 ORF68375 - 0.0026 17.7 0.3 0.0048 16.8 0.3 1.5 1 0 0 1 1 1 1 Sulfotransferase family MORN PF02493.20 ORF67790 - 2.4e-15 55.4 28.8 0.00072 19.3 1.2 6.7 7 0 0 7 7 7 5 MORN repeat Tudor_2 PF18104.1 ORF67790 - 0.056 13.1 4.8 3 7.6 0.0 3.5 3 0 0 3 3 3 0 Jumonji domain-containing protein 2A Tudor domain RNAse_A_bac PF18431.1 ORF67610 - 5.4 8.0 8.8 4.5 8.3 1.9 2.4 2 0 0 2 2 2 0 Bacterial CdiA-CT RNAse A domain DUF2951 PF11166.8 ORF65926 - 0.15 12.3 0.1 0.64 10.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) HTH_24 PF13412.6 ORF63247 - 0.039 13.5 0.6 0.94 9.1 0.2 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding Mg_trans_NIPA PF05653.14 ORF6168 - 1.5e-07 30.8 3.4 1.5e-07 30.8 3.4 1.4 2 0 0 2 2 2 1 Magnesium transporter NIPA EamA PF00892.20 ORF6168 - 6.6e-05 23.1 3.9 6.6e-05 23.1 3.9 2.7 3 0 0 3 3 3 2 EamA-like transporter family Mannosyl_trans4 PF15971.5 ORF6168 - 0.28 11.0 5.3 1.1 9.1 0.2 2.3 2 0 0 2 2 2 0 DolP-mannose mannosyltransferase Glyco_hydro_15 PF00723.21 ORF61141 - 5.2e-09 35.4 0.0 2.6e-08 33.1 0.0 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 15 Phe_ZIP PF08916.11 ORF59817 - 7.3e-06 26.6 17.4 4.5 8.0 0.1 6.2 5 1 1 6 6 6 5 Phenylalanine zipper HSA PF07529.13 ORF59817 - 0.0013 19.0 13.4 1.2 9.5 0.4 4.6 4 0 0 4 4 4 3 HSA PA26 PF04636.13 ORF56513 - 0.11 11.4 0.8 0.13 11.1 0.8 1.1 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) EF-hand_6 PF13405.6 ORF48027 - 0.0055 16.5 0.0 0.059 13.3 0.1 2.4 2 0 0 2 2 2 1 EF-hand domain Ion_trans PF00520.31 ORF48027 - 0.015 14.5 0.6 0.023 13.9 0.6 1.3 1 0 0 1 1 1 0 Ion transport protein EF-hand_7 PF13499.6 ORF48027 - 0.016 15.7 0.2 0.052 14.0 0.1 1.9 1 1 0 1 1 1 0 EF-hand domain pair Gon7 PF08738.10 ORF48027 - 0.03 14.4 0.1 0.18 11.9 0.0 2.1 2 1 0 2 2 2 0 Gon7 family EF-hand_1 PF00036.32 ORF48027 - 0.058 13.0 0.0 0.28 10.8 0.1 2.2 2 0 0 2 2 2 0 EF hand EF-hand_5 PF13202.6 ORF48027 - 0.1 12.1 0.1 0.26 10.9 0.1 1.7 1 0 0 1 1 1 0 EF hand EamA PF00892.20 ORF46055 - 2.7e-18 66.5 24.8 9.4e-15 55.0 5.8 2.0 2 0 0 2 2 2 2 EamA-like transporter family Sugar_transport PF06800.12 ORF46055 - 0.00063 19.2 17.3 0.045 13.1 2.5 2.4 1 1 2 3 3 3 2 Sugar transport protein Nab2p_Zf1 PF18260.1 ORF46055 - 0.025 14.5 0.0 0.042 13.8 0.0 1.3 1 0 0 1 1 1 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 MFS_1 PF07690.16 ORF45569 - 3.7e-16 59.0 22.5 3.7e-16 59.0 22.5 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily rOmpB PF12334.8 ORF39464 - 0.04 13.4 0.2 10 5.5 0.0 2.7 3 0 0 3 3 3 0 Rickettsia outer membrane protein B Plug PF07715.15 ORF39464 - 0.7 10.5 3.2 50 4.5 0.0 3.3 1 1 2 3 3 3 0 TonB-dependent Receptor Plug Domain DUF5518 PF17647.1 ORF38367 - 0.12 12.6 7.1 3.6 7.8 7.1 2.3 1 1 0 1 1 1 0 Family of unknown function (DUF5518) MORN_2 PF07661.13 ORF34483 - 0.16 12.3 4.6 3.8 8.0 1.5 3.7 3 0 0 3 3 3 0 MORN repeat variant Pkinase PF00069.25 ORF28647 - 6.9e-46 156.7 0.0 1.1e-45 156.1 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF28647 - 2.3e-17 63.1 0.9 4.9e-17 62.1 0.0 2.0 3 0 0 3 3 3 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF28647 - 0.00078 18.8 0.0 0.0012 18.3 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Tagatose_6_P_K PF08013.11 ORF28647 - 0.056 12.1 2.4 0.077 11.7 2.4 1.1 1 0 0 1 1 1 0 Tagatose 6 phosphate kinase MSP1a PF11670.8 ORF26628 - 0.001 18.4 0.4 0.0015 17.9 0.4 1.2 1 0 0 1 1 1 1 Major surface protein 1a (MSP1a) Prok-RING_1 PF14446.6 ORF26628 - 0.011 15.7 5.0 0.011 15.7 5.0 2.3 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 RINGv PF12906.7 ORF26628 - 0.6 10.3 14.3 2.8 8.1 11.7 2.9 2 1 1 3 3 3 0 RING-variant domain PHD PF00628.29 ORF26628 - 1.9 8.5 14.0 0.22 11.5 5.9 2.8 3 0 0 3 3 3 0 PHD-finger BNIP3 PF06553.12 ORF26386 - 0.025 14.2 2.4 0.054 13.2 2.4 1.5 1 1 0 1 1 1 0 BNIP3 DUF2786 PF10979.8 ORF26386 - 0.07 13.1 0.2 0.15 12.0 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2786) ArfGap PF01412.18 ORF26132 - 6.3e-33 113.3 0.6 6.3e-33 113.3 0.6 1.6 2 0 0 2 2 2 1 Putative GTPase activating protein for Arf Zn_Tnp_IS1595 PF12760.7 ORF26132 - 0.12 12.4 0.4 0.19 11.8 0.4 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-C3HC4_3 PF13920.6 ORF26132 - 0.45 10.4 2.8 0.7 9.8 2.8 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Sigma54_activat PF00158.26 ORF152496 - 1.1e-48 165.1 0.1 1.6e-48 164.6 0.1 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 ORF152496 - 4.3e-16 58.4 3.8 1.2e-15 57.0 1.5 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family Sigma54_activ_2 PF14532.6 ORF152496 - 1.3e-12 48.0 0.0 2.7e-12 47.0 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 ORF152496 - 0.0017 18.4 0.0 0.0043 17.1 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF152496 - 0.18 11.9 0.0 0.31 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) Cytochrom_C_2 PF01322.20 ORF151315 - 0.019 15.9 2.4 0.03 15.2 1.6 1.8 1 1 0 1 1 1 0 Cytochrome C' zf-3CxxC PF13695.6 ORF151315 - 0.24 11.9 3.5 13 6.3 1.0 2.5 2 0 0 2 2 2 0 Zinc-binding domain Antimicrobial19 PF08225.11 ORF151315 - 0.48 10.1 1.8 1.4 8.6 0.9 2.1 2 0 0 2 2 2 0 Pseudin antimicrobial peptide Prefoldin PF02996.17 ORF151315 - 0.98 9.3 6.0 3.4 7.6 0.6 2.4 1 1 1 2 2 2 0 Prefoldin subunit TraF_2 PF13729.6 ORF151315 - 6.3 6.1 7.3 1.4 8.2 0.4 2.1 1 1 1 2 2 2 0 F plasmid transfer operon, TraF, protein Snf7 PF03357.21 ORF14952 - 4.4e-29 101.3 17.5 7e-29 100.6 17.5 1.3 1 1 0 1 1 1 1 Snf7 Trans_reg_C PF00486.28 ORF14952 - 0.063 13.4 2.5 5.8 7.1 0.7 3.0 3 1 0 3 3 3 0 Transcriptional regulatory protein, C terminal DUF5082 PF16888.5 ORF14952 - 0.31 11.3 5.9 1.3 9.3 1.5 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) Allexi_40kDa PF05549.11 ORF14952 - 1.9 8.0 5.6 5.1 6.5 2.3 2.1 1 1 1 2 2 2 0 Allexivirus 40kDa protein Spc24 PF08286.11 ORF14952 - 5.8 7.2 10.8 0.56 10.5 2.0 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF2203 PF09969.9 ORF14952 - 9.8 6.9 9.4 34 5.2 3.8 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) p450 PF00067.22 ORF144496 - 8.1e-19 67.7 0.0 9.2e-19 67.5 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DBD_HTH PF18430.1 ORF138102 - 0.077 12.8 0.3 0.077 12.8 0.3 2.5 3 0 0 3 3 3 0 Putative DNA-binding domain STAT_alpha PF01017.20 ORF138102 - 2.4 8.0 11.3 0.36 10.7 6.2 2.1 2 0 0 2 2 2 0 STAT protein, all-alpha domain Pkinase PF00069.25 ORF137700 - 3.3e-49 167.6 0.0 4.1e-49 167.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF137700 - 3.1e-21 75.8 0.0 4.8e-21 75.2 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF137700 - 0.0014 17.6 0.0 0.0023 16.9 0.0 1.3 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 ORF137700 - 0.0047 16.9 0.0 0.0085 16.0 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family FTA2 PF13095.6 ORF137700 - 0.0058 16.3 0.0 0.0087 15.7 0.0 1.3 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 ORF137700 - 0.017 14.5 0.0 0.03 13.7 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF1499 PF07386.11 ORF137459 - 4.1e-08 33.8 0.0 1.5e-07 31.9 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1499) DUF373 PF04123.13 ORF137459 - 0.25 10.8 2.1 0.46 9.9 2.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DHHC PF01529.20 ORF137459 - 1.8 8.7 9.9 7.3 6.7 9.9 2.0 1 1 0 1 1 1 0 DHHC palmitoyltransferase Cob_adeno_trans PF01923.18 ORF137253 - 1.3e-10 41.6 0.0 2e-10 41.1 0.0 1.3 1 0 0 1 1 1 1 Cobalamin adenosyltransferase TPR_2 PF07719.17 ORF134072 - 9.9e-11 40.9 4.1 0.0003 20.7 0.1 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF134072 - 3e-08 33.2 12.4 2e-05 24.2 0.2 5.3 5 1 1 6 6 6 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF134072 - 1.8e-05 24.3 1.8 0.015 15.0 0.1 3.6 3 0 0 3 3 3 1 TPR repeat TPR_8 PF13181.6 ORF134072 - 1.9e-05 24.5 10.7 0.00034 20.6 0.4 4.8 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF134072 - 9.2e-05 22.7 0.1 0.0003 21.0 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF134072 - 0.03 14.8 0.1 0.3 11.6 0.0 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF134072 - 0.17 12.8 0.0 9.3 7.4 0.0 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat Tmpp129 PF10272.9 ORF134072 - 0.27 10.5 1.7 0.88 8.8 0.5 2.0 2 0 0 2 2 2 0 Putative transmembrane protein precursor TPR_17 PF13431.6 ORF134072 - 0.33 11.4 1.5 2.5 8.7 0.2 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat MIT PF04212.18 ORF134072 - 0.76 9.9 7.2 2.6 8.2 0.1 2.9 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain VIT PF08487.10 ORF131482 - 7.8e-20 71.1 0.5 1.4e-19 70.3 0.5 1.4 1 0 0 1 1 1 1 Vault protein inter-alpha-trypsin domain VIT_2 PF13757.6 ORF131482 - 0.021 14.7 0.0 0.042 13.7 0.0 1.5 1 0 0 1 1 1 0 Vault protein inter-alpha-trypsin domain DUF5123 PF17161.4 ORF131482 - 4.8 8.3 8.8 0.3 12.2 0.7 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF5123) RFC1 PF08519.12 ORF129969 - 0.026 14.7 0.5 0.053 13.7 0.5 1.4 1 0 0 1 1 1 0 Replication factor RFC1 C terminal domain DUF2887 PF11103.8 ORF129969 - 0.088 12.8 1.8 0.14 12.2 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2887) Cation_ATPase_C PF00689.21 ORF124812 - 2.5e-15 56.7 12.9 3.3e-15 56.3 12.9 1.2 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 ORF124812 - 0.0052 17.1 0.1 0.0069 16.7 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase COX7C PF02935.16 ORF124812 - 0.0057 16.9 0.2 0.0057 16.9 0.2 2.1 2 0 0 2 2 2 1 Cytochrome c oxidase subunit VIIc Hydrolase_3 PF08282.12 ORF124812 - 0.0096 15.7 0.1 0.013 15.2 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PP2C PF00481.21 ORF118577 - 5.1e-47 160.7 0.8 6.3e-47 160.4 0.8 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF118577 - 5.3e-10 39.3 1.4 1.6e-09 37.7 1.4 1.7 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF118577 - 0.00027 20.9 0.4 0.07 13.0 0.1 2.2 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) Arf PF00025.21 ORF11591 - 3.5e-73 244.7 0.2 4.7e-73 244.3 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF11591 - 7.4e-15 54.8 0.0 1e-14 54.4 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF11591 - 1.8e-14 54.0 0.0 2.7e-14 53.4 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF11591 - 2.5e-13 50.0 0.0 3.2e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF11591 - 6e-11 42.1 1.2 3.5e-07 29.7 0.3 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF11591 - 6.4e-09 35.5 0.0 8.3e-09 35.1 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF11591 - 2.5e-05 24.3 0.0 4.2e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF11591 - 0.15 11.4 0.1 0.24 10.7 0.1 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Tho1_MOS11_C PF18592.1 ORF108964 - 0.0035 17.1 2.2 0.0059 16.4 0.3 2.1 2 0 0 2 2 2 1 Tho1/MOS11 C-terminal domain DUF5404 PF17397.2 ORF108964 - 0.13 12.4 1.6 0.68 10.1 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5404) NicO PF03824.16 ORF106183 - 8.4e-39 133.6 15.7 1e-38 133.3 15.7 1.1 1 0 0 1 1 1 1 High-affinity nickel-transport protein DUF2754 PF10953.8 ORF106183 - 1.7 8.9 6.0 4.6 7.6 0.2 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2754) BTB PF00651.31 ORF106142 - 4.8e-13 49.3 0.0 8.6e-13 48.5 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain C1_2 PF03107.16 ORF104122 - 6.3e-05 23.2 11.2 0.00019 21.7 8.2 2.4 2 0 0 2 2 2 1 C1 domain C1_1 PF00130.22 ORF104122 - 0.0022 17.8 8.2 0.053 13.4 4.9 2.4 2 0 0 2 2 2 2 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RING_4 PF14570.6 ORF104122 - 0.0092 15.8 4.8 0.0092 15.8 4.8 2.4 2 1 1 3 3 3 1 RING/Ubox like zinc-binding domain ZZ PF00569.17 ORF104122 - 0.14 12.0 5.0 0.33 10.8 5.0 1.7 1 0 0 1 1 1 0 Zinc finger, ZZ type PHD PF00628.29 ORF104122 - 1.3 9.0 10.8 6.3 6.8 10.8 2.1 1 1 0 1 1 1 0 PHD-finger IBR PF01485.21 ORF104122 - 2.6 8.4 9.9 9.3 6.6 9.9 2.0 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain Cytochrom_c3_2 PF14537.6 ORF104122 - 9.6 6.7 11.2 30 5.2 10.7 2.2 1 1 0 1 1 1 0 Cytochrome c3 Cnd1 PF12717.7 NODE_25223_length_834_cov_2.241552_g19671_i0reverse_frame_1 - 0.00018 21.6 0.2 0.031 14.3 0.0 2.2 2 0 0 2 2 2 2 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 NODE_25223_length_834_cov_2.241552_g19671_i0reverse_frame_1 - 0.0058 16.8 0.0 3.7 8.1 0.0 3.5 3 0 0 3 3 3 1 HEAT repeat DUF577 PF04510.12 NODE_25223_length_834_cov_2.241552_g19671_i0reverse_frame_1 - 0.13 12.1 0.1 0.26 11.2 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF577) Porin_1 PF00267.21 NODE_25186_length_835_cov_3.558750_g19642_i0forward_frame_2 - 2.7e-80 270.4 18.1 3e-80 270.2 18.1 1.0 1 0 0 1 1 1 1 Gram-negative porin TIP39 PF14980.6 NODE_25172_length_835_cov_200.622500_g19629_i0reverse_frame_3 - 0.083 12.8 0.1 0.18 11.7 0.1 1.5 1 0 0 1 1 1 0 TIP39 peptide CENP-B_dimeris PF09026.10 NODE_25116_length_836_cov_13504.411985_g9198_i5reverse_frame_2 - 0.00015 22.1 3.5 0.00026 21.3 3.5 1.3 1 0 0 1 1 1 1 Centromere protein B dimerisation domain RXT2_N PF08595.11 NODE_25116_length_836_cov_13504.411985_g9198_i5reverse_frame_2 - 0.014 15.4 0.4 0.018 15.1 0.4 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal FAM176 PF14851.6 NODE_25116_length_836_cov_13504.411985_g9198_i5reverse_frame_2 - 0.53 9.9 2.7 0.87 9.2 2.7 1.3 1 0 0 1 1 1 0 FAM176 family DUF3888 PF13027.6 NODE_25116_length_836_cov_13504.411985_g9198_i5forward_frame_3 - 0.0067 16.8 0.2 0.018 15.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3888) PTS_IIB PF02302.17 NODE_25114_length_837_cov_3.331671_g19583_i0forward_frame_2 - 2.7e-19 69.6 0.5 4.5e-19 68.9 0.5 1.4 1 0 0 1 1 1 1 PTS system, Lactose/Cellobiose specific IIB subunit DUF4090 PF13319.6 ORF98974 - 0.11 12.8 0.0 0.28 11.5 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4090) MIP PF00230.20 ORF96896 - 3.2e-14 53.2 4.4 3.4e-12 46.6 1.1 2.1 1 1 1 2 2 2 2 Major intrinsic protein DUF4440 PF14534.6 ORF96705 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF96705 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF96705 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF96705 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF96705 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF96705 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide P34-Arc PF04045.14 ORF93060 - 1.1e-20 74.4 1.3 4.2e-19 69.2 1.3 2.1 1 1 0 1 1 1 1 Arp2/3 complex, 34 kD subunit p34-Arc DUF4440 PF14534.6 ORF87617 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF87617 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF87617 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF87617 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF87617 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF87617 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide DSPc PF00782.20 ORF87389 - 9.6e-11 41.6 0.0 1.3e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 ORF87389 - 0.017 15.1 0.0 0.021 14.8 0.0 1.4 1 0 0 1 1 1 0 Tyrosine phosphatase family Y_phosphatase PF00102.27 ORF87389 - 0.024 14.2 0.0 0.035 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein-tyrosine phosphatase DSPn PF14671.6 ORF87389 - 0.093 13.2 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Dual specificity protein phosphatase, N-terminal half Myotub-related PF06602.14 ORF87389 - 0.14 11.1 0.0 0.17 10.7 0.0 1.2 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain PQ-loop PF04193.14 ORF84716 - 2e-30 104.3 14.1 3.2e-16 58.9 5.5 3.4 4 0 0 4 4 4 2 PQ loop repeat DUF4440 PF14534.6 ORF84590 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF84590 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF84590 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF84590 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF84590 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF84590 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Thioredoxin_15 PF18403.1 ORF83641 - 0.071 13.0 0.1 0.22 11.4 0.1 1.7 2 0 0 2 2 2 0 Thioredoxin-like domain Fe_dep_repr_C PF02742.15 ORF83641 - 0.075 13.1 0.2 0.26 11.4 0.1 1.9 2 0 0 2 2 2 0 Iron dependent repressor, metal binding and dimerisation domain TerD PF02342.18 ORF81937 - 3.3e-37 127.8 0.0 4.7e-37 127.3 0.0 1.2 1 0 0 1 1 1 1 TerD domain SBBP PF06739.11 ORF81937 - 0.093 12.7 0.2 0.18 11.8 0.2 1.4 1 0 0 1 1 1 0 Beta-propeller repeat HSF_DNA-bind PF00447.17 ORF81304 - 0.0042 17.7 1.6 0.0042 17.7 1.6 2.3 2 0 0 2 2 2 1 HSF-type DNA-binding GldM_N PF12081.8 ORF81304 - 0.0044 17.1 9.1 0.006 16.7 8.8 1.6 1 1 0 1 1 1 1 GldM N-terminal domain Hormone_1 PF00103.20 ORF81304 - 0.0058 16.4 1.0 0.0058 16.4 1.0 1.7 2 0 0 2 2 2 1 Somatotropin hormone family DivIVA PF05103.13 ORF81304 - 0.015 15.4 4.8 0.023 14.8 4.8 1.3 1 0 0 1 1 1 0 DivIVA protein CENP-Q PF13094.6 ORF81304 - 0.031 14.5 6.5 0.042 14.1 5.3 1.8 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit HSCB_C PF07743.13 ORF81304 - 0.056 13.9 1.0 0.14 12.6 1.0 1.8 1 0 0 1 1 1 0 HSCB C-terminal oligomerisation domain Jnk-SapK_ap_N PF09744.9 ORF81304 - 0.1 12.8 8.9 0.16 12.2 8.9 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DUF4020 PF13212.6 ORF81304 - 0.12 12.2 0.1 0.3 10.9 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4020) ZapB PF06005.12 ORF81304 - 0.2 12.1 4.8 0.53 10.8 4.8 1.7 1 0 0 1 1 1 0 Cell division protein ZapB XhlA PF10779.9 ORF81304 - 0.38 11.0 2.4 0.97 9.7 2.4 1.7 1 0 0 1 1 1 0 Haemolysin XhlA DUF1664 PF07889.12 ORF81304 - 0.87 9.6 5.1 1.2 9.2 3.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Herpes_UL6 PF01763.16 ORF81304 - 2.8 6.3 12.5 10 4.5 12.5 1.8 1 1 0 1 1 1 0 Herpesvirus UL6 like zf-CCCH PF00642.24 ORF748 - 8.7e-11 41.5 16.7 1.2e-08 34.6 1.6 3.3 3 0 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_3 PF15663.5 ORF748 - 8.9e-05 22.7 1.2 0.25 11.6 0.2 2.4 2 0 0 2 2 2 2 Zinc-finger containing family RRM_1 PF00076.22 ORF748 - 0.00015 21.5 0.0 0.00039 20.2 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Torus PF16131.5 ORF748 - 0.0094 16.6 9.9 0.13 13.0 0.1 2.8 3 1 0 3 3 3 2 Torus domain zf_CCCH_4 PF18345.1 ORF748 - 0.018 15.1 3.9 0.018 15.1 3.9 3.1 3 0 0 3 3 3 0 Zinc finger domain DUF429 PF04250.13 ORF748 - 0.03 14.1 0.4 0.045 13.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF429) JmjC PF02373.22 ORF72200 - 1.4e-37 128.6 0.3 2.5e-37 127.8 0.3 1.5 1 0 0 1 1 1 1 JmjC domain, hydroxylase zf-C5HC2 PF02928.16 ORF72200 - 2.1e-08 34.4 14.4 3.7e-08 33.6 14.4 1.4 1 0 0 1 1 1 1 C5HC2 zinc finger RCC1 PF00415.18 ORF61486 - 2.1e-36 124.3 1.9 3.4e-09 37.2 0.0 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF61486 - 6.8e-23 79.9 20.7 5.2e-09 35.7 0.4 5.1 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Peptidase_C25_C PF03785.14 ORF61486 - 0.0046 16.8 0.1 2.7 7.9 0.1 2.5 2 0 0 2 2 2 2 Peptidase family C25, C terminal ig-like domain PIH1_CS PF18201.1 ORF50986 - 0.025 15.0 0.4 0.39 11.1 0.0 2.7 3 0 0 3 3 3 0 PIH1 CS-like domain DUF4440 PF14534.6 ORF47223 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF47223 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF47223 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF47223 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF47223 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF47223 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Bro-N PF02498.17 ORF45615 - 4.3e-08 33.7 0.2 2e-07 31.6 0.0 2.1 3 0 0 3 3 3 1 BRO family, N-terminal domain IL17R_fnIII_D1 PF16556.5 ORF43125 - 0.032 13.9 0.2 0.2 11.3 0.1 2.0 2 0 0 2 2 2 0 Interleukin-17 receptor, fibronectin-III-like domain 1 Kinesin PF00225.23 ORF41161 - 6e-90 301.5 1.4 7.1e-90 301.3 1.4 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF41161 - 8.2e-06 25.8 0.0 1.7e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 Microtubule binding Kinesin_assoc PF16183.5 ORF41161 - 0.0008 19.6 3.1 0.0031 17.7 0.2 2.3 2 0 0 2 2 2 1 Kinesin-associated MGC-24 PF05283.11 ORF40736 - 3.1e-08 34.2 1.0 3.1e-08 34.2 1.0 1.9 2 0 0 2 2 2 1 Multi-glycosylated core protein 24 (MGC-24), sialomucin Amnionless PF14828.6 ORF40736 - 0.029 13.2 0.0 0.043 12.6 0.0 1.3 1 0 0 1 1 1 0 Amnionless Mucin PF01456.17 ORF40736 - 0.029 14.3 15.7 0.061 13.3 15.7 1.5 1 0 0 1 1 1 0 Mucin-like glycoprotein TMEM154 PF15102.6 ORF40736 - 0.054 13.4 4.5 0.17 11.8 4.5 1.7 1 1 0 1 1 1 0 TMEM154 protein family DUF5305 PF17231.2 ORF40736 - 0.058 12.8 0.1 0.08 12.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5305) EphA2_TM PF14575.6 ORF40736 - 0.074 13.9 0.4 3.5 8.6 0.0 2.4 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Glycoprotein PF03409.15 ORF40736 - 0.1 11.5 5.1 0.14 11.0 5.1 1.1 1 0 0 1 1 1 0 Transmembrane glycoprotein Insulin_TMD PF17870.1 ORF40736 - 0.33 11.1 1.7 3.8 7.7 0.1 2.3 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment Sporozoite_P67 PF05642.11 ORF40736 - 1.7 6.6 5.3 2 6.4 5.3 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Med3 PF11593.8 ORF40736 - 3.4 6.7 11.2 5 6.2 11.2 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DivIC PF04977.15 ORF39428 - 0.015 15.1 5.7 0.015 15.1 5.7 4.6 3 2 1 4 4 4 0 Septum formation initiator Sugar_tr PF00083.24 ORF38699 - 4.2e-08 32.5 12.8 9.5e-08 31.3 12.8 1.7 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF38699 - 0.0047 15.9 12.6 0.026 13.5 11.7 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1514 PF07438.11 ORF38699 - 0.4 10.6 7.0 0.51 10.2 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1514) FUSC_2 PF13515.6 ORF38699 - 5.1 7.2 12.0 0.6 10.2 5.0 2.6 1 1 1 3 3 3 0 Fusaric acid resistance protein-like 2OG-FeII_Oxy_3 PF13640.6 ORF36297 - 0.00055 20.8 0.0 0.0011 19.8 0.0 1.6 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DUF4440 PF14534.6 ORF31882 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF31882 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF31882 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF31882 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF31882 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF31882 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide Kinesin PF00225.23 ORF28067 - 6e-90 301.5 1.4 7.1e-90 301.3 1.4 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF28067 - 8.2e-06 25.8 0.0 1.7e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 Microtubule binding Kinesin_assoc PF16183.5 ORF28067 - 0.0008 19.6 3.1 0.0031 17.7 0.2 2.3 2 0 0 2 2 2 1 Kinesin-associated RCC1 PF00415.18 ORF27831 - 2.1e-36 124.3 1.9 3.4e-09 37.2 0.0 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF27831 - 6.8e-23 79.9 20.7 5.2e-09 35.7 0.4 5.1 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Peptidase_C25_C PF03785.14 ORF27831 - 0.0046 16.8 0.1 2.7 7.9 0.1 2.5 2 0 0 2 2 2 2 Peptidase family C25, C terminal ig-like domain DUF4440 PF14534.6 ORF21882 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF21882 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF21882 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF21882 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF21882 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF21882 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide DUF4440 PF14534.6 ORF147427 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF147427 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF147427 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF147427 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF147427 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF147427 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide NOGCT PF08155.11 ORF141821 - 0.00031 20.7 0.8 0.001 19.0 0.8 1.9 1 0 0 1 1 1 1 NOGCT (NUC087) domain Helicase_C PF00271.31 ORF140168 - 2.7e-27 95.3 0.0 4.6e-27 94.6 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF140168 - 6e-05 22.9 0.0 0.0025 17.6 0.0 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase zf-C2H2 PF00096.26 ORF138866 - 1.4e-16 60.0 20.3 2.1e-06 27.8 2.8 3.5 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF138866 - 5.5e-11 42.4 25.9 2.8e-09 37.0 1.6 4.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF138866 - 2.9e-10 40.1 17.8 0.0032 18.2 1.7 3.6 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF138866 - 1.2e-05 25.1 21.9 0.0017 18.3 4.3 3.3 3 0 0 3 3 3 2 C2H2-type zinc finger zf-met PF12874.7 ORF138866 - 0.00077 19.8 9.0 0.54 10.7 2.4 3.9 3 0 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF138866 - 0.0021 17.8 4.0 0.63 9.9 1.1 2.4 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-H2C2_5 PF13909.6 ORF138866 - 0.048 13.4 18.7 0.065 13.0 4.1 3.3 3 0 0 3 3 3 0 C2H2-type zinc-finger domain zf-C2H2_3rep PF18868.1 ORF138866 - 0.24 12.1 9.6 0.17 12.5 3.7 2.4 2 0 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-Di19 PF05605.12 ORF138866 - 0.62 10.4 7.7 0.49 10.7 5.0 2.2 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zinc_ribbon_15 PF17032.5 ORF138866 - 0.74 10.6 8.9 1.4 9.8 1.9 2.6 1 1 1 2 2 2 0 zinc-ribbon family Zn-ribbon_8 PF09723.10 ORF138866 - 3.7 7.7 7.2 32 4.7 4.1 3.1 1 1 1 2 2 2 0 Zinc ribbon domain zf-C2H2_8 PF15909.5 ORF138866 - 5 7.5 10.7 0.31 11.4 1.1 2.5 2 1 1 3 3 2 0 C2H2-type zinc ribbon zf-MYST PF17772.1 ORF138866 - 7.1 6.3 8.2 2.6 7.7 0.9 3.1 3 0 0 3 3 3 0 MYST family zinc finger domain DUF418 PF04235.12 ORF134547 - 0.0072 16.3 7.2 0.0079 16.1 6.1 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF418) PRT_C PF08372.10 ORF134547 - 0.087 12.6 1.2 0.25 11.1 0.1 2.0 1 1 0 2 2 2 0 Plant phosphoribosyltransferase C-terminal DHHC PF01529.20 ORF134393 - 4.1e-28 98.2 17.5 4.1e-28 98.2 17.5 2.3 2 0 0 2 2 2 2 DHHC palmitoyltransferase DUF4440 PF14534.6 ORF131736 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF131736 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF131736 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF131736 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF131736 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF131736 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide CDC45 PF02724.14 ORF128574 - 5.2e-09 35.0 17.9 7.1e-09 34.5 17.9 1.1 1 0 0 1 1 1 1 CDC45-like protein RNA_pol_Rpc4 PF05132.14 ORF128574 - 0.97 9.9 10.4 0.081 13.4 5.1 1.9 2 0 0 2 2 2 0 RNA polymerase III RPC4 CobT PF06213.12 ORF128574 - 4.6 6.5 20.0 0.028 13.8 11.3 1.6 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT MIP PF00230.20 ORF125989 - 6.4e-15 55.5 1.0 1.1e-14 54.7 1.0 1.4 1 1 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF125989 - 0.034 13.6 0.9 0.13 11.7 0.2 2.4 2 0 0 2 2 2 0 Transmembrane alpha-helix domain DUF4440 PF14534.6 ORF125574 - 4e-08 33.6 0.1 0.00088 19.7 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) SnoaL_2 PF12680.7 ORF125574 - 4.7e-06 27.2 0.8 0.0022 18.6 0.1 2.6 2 1 1 3 3 3 2 SnoaL-like domain SnoaL_3 PF13474.6 ORF125574 - 5.2e-05 23.5 0.0 0.04 14.2 0.0 2.4 2 0 0 2 2 2 2 SnoaL-like domain CaMKII_AD PF08332.10 ORF125574 - 0.0015 18.7 0.2 0.76 9.9 0.0 2.3 2 0 0 2 2 2 2 Calcium/calmodulin dependent protein kinase II association domain OLF PF02191.16 ORF125574 - 0.12 11.9 0.1 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Olfactomedin-like domain GBP_PSP PF02425.15 ORF125574 - 0.19 11.4 2.8 3.6 7.3 0.2 2.6 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide FliJ PF02050.16 ORF1164 - 0.11 12.7 3.1 3.1 8.1 0.0 3.2 2 1 2 4 4 4 0 Flagellar FliJ protein Cep57_CLD_2 PF14197.6 ORF1164 - 1.1 9.3 5.7 18 5.5 0.1 3.4 3 0 0 3 3 3 0 Centrosome localisation domain of PPC89 DBR1 PF05011.13 ORF115949 - 0.019 15.4 0.1 0.025 15.0 0.1 1.3 1 0 0 1 1 1 0 Lariat debranching enzyme, C-terminal domain DnaJ PF00226.31 ORF11294 - 1.5e-09 37.8 0.0 3.6e-09 36.6 0.0 1.7 1 0 0 1 1 1 1 DnaJ domain FliM PF02154.15 ORF112720 - 0.01 15.7 0.1 0.024 14.5 0.1 1.6 1 1 0 1 1 1 0 Flagellar motor switch protein FliM Endopep_inhib PF16800.5 ORF112720 - 0.026 14.5 0.6 0.074 13.0 0.1 1.8 2 0 0 2 2 2 0 IseA DL-endopeptidase inhibitor DUF4194 PF13835.6 ORF112148 - 0.12 12.1 1.4 0.86 9.3 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4194) SPATA3 PF15662.5 ORF112148 - 7 7.2 7.5 21 5.7 3.0 2.1 2 0 0 2 2 2 0 Spermatogenesis-associated protein 3 family HTH_18 PF12833.7 ORF110316 - 4.4e-26 91.0 1.7 8.1e-26 90.1 1.2 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain AraC_binding PF02311.19 ORF110316 - 9.5e-24 83.8 1.9 9.5e-24 83.8 1.9 1.7 2 0 0 2 2 2 1 AraC-like ligand binding domain HTH_AraC PF00165.23 ORF110316 - 1.5e-22 79.1 0.2 1.5e-10 40.9 0.1 2.4 2 0 0 2 2 2 2 Bacterial regulatory helix-turn-helix proteins, AraC family Cupin_2 PF07883.11 ORF110316 - 9.3e-05 22.1 3.1 0.00016 21.3 3.1 1.3 1 0 0 1 1 1 1 Cupin domain DUF4924 PF16271.5 ORF110316 - 0.056 13.5 0.0 0.09 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4924) HTH_Tnp_ISL3 PF13542.6 ORF110316 - 0.099 12.1 0.1 3.7 7.0 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Phage_integrase PF00589.22 ORF105548 - 2.3e-46 157.7 0.2 3.8e-46 157.0 0.0 1.4 2 0 0 2 2 2 1 Phage integrase family NPM1-C PF16276.5 ORF105548 - 0.024 14.6 0.6 0.054 13.5 0.6 1.6 1 0 0 1 1 1 0 Nucleophosmin C-terminal domain Patched PF02460.18 ORF103554 - 1.8e-23 82.6 4.2 2.1e-23 82.4 4.2 1.0 1 0 0 1 1 1 1 Patched family ACR_tran PF00873.19 ORF103554 - 1.2e-05 23.3 0.8 1.5e-05 22.9 0.8 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family Yip1 PF04893.17 ORF103554 - 0.073 12.8 14.2 0.27 10.9 6.0 2.2 2 0 0 2 2 2 0 Yip1 domain SecD_SecF PF02355.16 ORF103554 - 1.7 8.0 8.8 3.5 7.0 8.8 1.4 1 1 0 1 1 1 0 Protein export membrane protein Leu_Phe_trans PF03588.14 ORF100410 - 4.1e-23 81.7 0.0 5.5e-23 81.3 0.0 1.2 1 0 0 1 1 1 1 Leucyl/phenylalanyl-tRNA protein transferase COX1 PF00115.20 ORF100138 - 0.023 13.6 1.3 0.49 9.2 0.1 2.6 2 1 1 3 3 3 0 Cytochrome C and Quinol oxidase polypeptide I DUF202 PF02656.15 ORF100138 - 0.78 10.2 3.2 5.1 7.6 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF202) NikR_C PF08753.11 ORF100001 - 0.06 13.5 0.5 0.32 11.2 0.1 2.4 2 0 0 2 2 2 0 NikR C terminal nickel binding domain FRB_dom PF08771.11 ORF100001 - 1 9.8 13.4 0.75 10.2 0.2 3.8 2 1 2 4 4 4 0 FKBP12-rapamycin binding domain SH3BGR PF04908.15 ORF100001 - 2.1 8.5 11.8 0.072 13.3 3.9 2.5 2 1 1 3 3 3 0 SH3-binding, glutamic acid-rich protein GRA6 PF05084.13 ORF100001 - 4 7.3 8.0 1.3 9.0 4.4 2.0 1 1 1 2 2 2 0 Granule antigen protein (GRA6) Cys_knot PF00007.22 NODE_25440_length_829_cov_3.405542_g19855_i0reverse_frame_1 - 0.021 15.1 1.2 1.8 8.9 0.2 2.3 2 0 0 2 2 2 0 Cystine-knot domain Meis_PKNOX_N PF16493.5 NODE_25435_length_829_cov_58.743073_g19850_i0forward_frame_1 - 2.1 8.7 6.3 0.65 10.4 0.8 2.2 2 0 0 2 2 2 0 N-terminal of Homeobox Meis and PKNOX1 IFP_35_N PF07334.13 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.0021 18.1 0.5 0.0021 18.1 0.5 3.7 3 1 0 3 3 3 1 Interferon-induced 35 kDa protein (IFP 35) N-terminus Wtap PF17098.5 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.015 15.2 19.1 0.046 13.6 18.9 1.8 1 1 0 1 1 1 0 WTAP/Mum2p family GAS PF13851.6 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.085 12.2 30.7 0.14 11.5 21.9 2.3 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding APG6_N PF17675.1 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.12 12.9 0.1 0.12 12.9 0.1 3.1 2 1 0 2 2 1 0 Apg6 coiled-coil region HPIH PF13323.6 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 0.13 12.1 1.5 0.22 11.4 1.5 1.3 1 0 0 1 1 1 0 N-terminal domain with HPIH motif ADIP PF11559.8 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 1.6 8.8 28.9 0.052 13.6 9.7 2.7 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding JAKMIP_CC3 PF16034.5 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 2.4 8.1 25.4 0.032 14.2 10.1 2.4 1 1 1 2 2 1 0 JAKMIP CC3 domain PI_PP_I PF18363.1 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 2.5 8.3 10.0 0.2 11.8 2.2 2.7 2 1 1 3 3 3 0 Phosphoinositide phosphatase insertion domain TMF_DNA_bd PF12329.8 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 3.5 7.7 28.5 0.56 10.2 2.3 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding XLF PF09302.11 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 4.6 7.4 13.7 0.37 11.0 2.1 2.8 2 1 1 3 3 3 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Prefoldin_3 PF13758.6 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 6.6 6.8 13.0 0.24 11.5 1.4 3.1 2 1 1 3 3 3 0 Prefoldin subunit OmpH PF03938.14 NODE_25398_length_830_cov_6.749686_g19817_i0reverse_frame_1 - 8.3 6.7 30.8 7.4 6.9 10.7 2.6 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) DUF418 PF04235.12 NODE_25383_length_830_cov_195.855346_g19804_i0forward_frame_1 - 0.31 10.9 2.2 0.63 10.0 2.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF418) DUF1054 PF06335.12 NODE_25280_length_832_cov_180.692597_g16397_i3reverse_frame_2 - 0.097 12.6 0.1 0.14 12.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Rad17 PF03215.15 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 6.3e-05 23.0 0.0 6.3e-05 23.0 0.0 1.6 2 0 0 2 2 1 1 Rad17 P-loop domain AAA_18 PF13238.6 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.0031 18.1 2.1 0.0039 17.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain DUF4287 PF14117.6 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.0043 17.2 0.1 0.29 11.3 0.1 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4287) Cytidylate_kin PF02224.18 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.011 15.5 0.0 0.011 15.5 0.0 1.6 2 0 0 2 2 1 0 Cytidylate kinase dNK PF01712.19 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.017 15.0 0.0 0.041 13.8 0.0 1.7 2 0 0 2 2 2 0 Deoxynucleoside kinase Sigma54_activ_2 PF14532.6 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.021 15.0 0.0 0.067 13.3 0.0 1.7 1 1 1 2 2 2 0 Sigma-54 interaction domain T2SSE PF00437.20 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.051 12.6 0.0 0.071 12.2 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein YHS PF04945.13 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.054 13.6 0.1 0.1 12.7 0.1 1.5 1 0 0 1 1 1 0 YHS domain Cytidylate_kin2 PF13189.6 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.082 13.0 0.0 0.082 13.0 0.0 2.0 2 0 0 2 2 1 0 Cytidylate kinase-like family AAA_17 PF13207.6 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.12 12.8 0.0 0.12 12.8 0.0 2.5 2 1 0 2 2 1 0 AAA domain DUF4746 PF15928.5 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 0.67 9.3 11.5 0.99 8.8 11.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Presenilin PF01080.17 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 1.3 7.7 2.4 1.4 7.6 2.4 1.1 1 0 0 1 1 1 0 Presenilin DUF4407 PF14362.6 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 5 6.4 7.7 7.4 5.8 7.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Med19 PF10278.9 NODE_25247_length_833_cov_111.850877_g19686_i0reverse_frame_2 - 5.5 6.9 19.3 12 5.8 19.3 1.5 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 zf-CCCH_2 PF14608.6 NODE_25247_length_833_cov_111.850877_g19686_i0forward_frame_3 - 1.1 9.9 5.0 20 5.8 0.3 3.0 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger CC2D2AN-C2 PF15625.6 NODE_25209_length_834_cov_164.396746_g19659_i0reverse_frame_3 - 0.0086 15.8 0.1 0.013 15.3 0.1 1.2 1 0 0 1 1 1 1 CC2D2A N-terminal C2 domain peroxidase PF00141.23 ORF98778 - 5.9e-46 157.0 0.0 9.6e-46 156.3 0.0 1.3 1 0 0 1 1 1 1 Peroxidase zf-RING_2 PF13639.6 ORF91374 - 1.4e-09 38.2 11.6 1.4e-09 38.2 11.6 4.4 4 2 2 6 6 5 1 Ring finger domain zf-RING_11 PF17123.5 ORF91374 - 3.5e-06 26.6 4.6 3.5e-06 26.6 4.6 3.6 4 0 0 4 4 4 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF91374 - 9.7e-06 25.5 4.7 9.7e-06 25.5 4.7 2.8 2 1 1 3 3 3 1 RING-type zinc-finger zf-rbx1 PF12678.7 ORF91374 - 3.3e-05 24.1 10.3 3.3e-05 24.1 10.3 3.2 3 1 1 4 4 4 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF91374 - 0.00015 21.5 11.4 0.00015 21.5 11.4 2.9 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF91374 - 0.00017 21.3 11.5 0.00017 21.3 11.5 2.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF91374 - 0.0024 17.9 7.2 0.0024 17.9 7.2 2.2 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF91374 - 0.0036 17.2 10.5 0.0036 17.2 10.5 3.5 4 0 0 4 4 4 1 zinc-RING finger domain DUF2304 PF10066.9 ORF91374 - 0.17 12.1 3.4 0.33 11.2 3.4 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) DUF4191 PF13829.6 ORF91374 - 0.8 9.0 2.7 1.2 8.5 2.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) zf-C3HC4_4 PF15227.6 ORF91374 - 7.2 6.9 20.9 0.68 10.1 11.9 3.7 3 1 1 4 4 4 0 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF91374 - 9.3 6.2 25.0 0.048 13.5 11.9 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 4 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks71.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks71.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks71.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks71.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- peroxidase PF00141.23 ORF86416 - 5.9e-46 157.0 0.0 9.6e-46 156.3 0.0 1.3 1 0 0 1 1 1 1 Peroxidase BPD_transp_1 PF00528.22 ORF79356 - 1.7e-22 80.0 5.1 1.7e-22 80.0 5.1 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ECF_trnsprt PF12822.7 ORF79356 - 0.086 12.9 9.3 0.05 13.7 7.3 1.6 2 1 0 2 2 2 0 ECF transporter, substrate-specific component DHHC PF01529.20 ORF77508 - 0.18 11.9 12.1 1.5 8.9 1.2 2.2 2 0 0 2 2 2 0 DHHC palmitoyltransferase CYSTM PF12734.7 ORF77508 - 0.36 11.2 0.1 0.36 11.2 0.1 2.6 2 0 0 2 2 2 0 Cysteine-rich TM module stress tolerance Phage_holin_3_6 PF07332.11 ORF77508 - 1.1 9.3 3.1 1.4 9.0 0.1 2.3 2 1 1 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III NiFeSe_Hases PF00374.19 ORF74262 - 4.6e-101 339.2 0.0 5.1e-101 339.1 0.0 1.0 1 0 0 1 1 1 1 Nickel-dependent hydrogenase TMF_TATA_bd PF12325.8 ORF73993 - 0.098 12.9 11.9 0.2 11.9 11.9 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding YabA PF06156.13 ORF73993 - 0.11 13.2 7.6 0.18 12.4 7.6 1.4 1 0 0 1 1 1 0 Initiation control protein YabA V_ATPase_I PF01496.19 ORF73993 - 0.15 9.9 4.4 0.18 9.7 4.4 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family JIP_LZII PF16471.5 ORF73993 - 0.26 11.5 7.5 0.28 11.4 6.0 1.8 1 1 0 1 1 1 0 JNK-interacting protein leucine zipper II SOGA PF11365.8 ORF73993 - 0.47 11.6 13.8 2.1 9.5 13.8 1.9 1 1 0 1 1 1 0 Protein SOGA APG6_N PF17675.1 ORF73993 - 2.2 8.8 20.7 1.3 9.6 18.6 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region ZapB PF06005.12 ORF73993 - 6 7.4 19.9 19 5.8 18.4 2.3 1 1 1 2 2 2 0 Cell division protein ZapB PPR_2 PF13041.6 ORF73490 - 2.9e-22 78.6 0.0 1.6e-08 34.6 0.0 3.7 1 1 3 4 4 4 4 PPR repeat family PPR_3 PF13812.6 ORF73490 - 2.4e-21 75.6 0.0 2.1e-08 34.1 0.0 3.1 1 1 3 4 4 4 4 Pentatricopeptide repeat domain PPR PF01535.20 ORF73490 - 1.9e-12 46.5 0.0 0.0085 16.3 0.0 5.2 5 0 0 5 5 5 4 PPR repeat PPR_1 PF12854.7 ORF73490 - 1e-09 37.9 0.0 0.77 9.5 0.0 5.6 5 1 0 5 5 5 4 PPR repeat PPR_long PF17177.4 ORF73490 - 2.5e-09 36.8 0.2 1.1e-08 34.8 0.2 1.8 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP ATP-grasp_4 PF13535.6 ORF73490 - 0.0015 18.1 0.0 0.48 10.0 0.0 2.6 1 1 2 3 3 3 2 ATP-grasp domain PTS_EIIC PF02378.18 ORF7344 - 0.078 12.0 0.3 0.17 10.9 0.2 1.5 1 1 0 1 1 1 0 Phosphotransferase system, EIIC Capsid-VNN PF11729.8 ORF7344 - 1.3 8.0 14.5 0.11 11.5 0.8 3.3 2 1 1 3 3 3 0 nodavirus capsid protein fn3 PF00041.21 ORF72326 - 6.4e-11 42.5 0.1 1.4e-10 41.4 0.1 1.5 1 0 0 1 1 1 1 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 ORF72326 - 0.0063 17.1 0.3 0.017 15.7 0.1 1.9 1 1 1 2 2 2 1 Purple acid Phosphatase, N-terminal domain RCC1_2 PF13540.6 ORF72326 - 0.12 12.2 1.5 0.22 11.4 0.1 2.1 2 0 0 2 2 2 0 Regulator of chromosome condensation (RCC1) repeat SpoIIE PF07228.12 ORF6940 - 1.8e-13 50.9 0.0 2.4e-13 50.4 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) PP2C PF00481.21 ORF6940 - 4.4e-10 39.6 0.0 6.9e-07 29.2 0.0 2.2 2 0 0 2 2 2 2 Protein phosphatase 2C Patched PF02460.18 ORF6748 - 2.6e-31 108.5 12.9 3e-31 108.3 12.9 1.0 1 0 0 1 1 1 1 Patched family ACR_tran PF00873.19 ORF6748 - 3.2e-06 25.2 10.9 3.6e-06 25.0 10.9 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 ORF6748 - 0.29 10.0 8.5 0.36 9.7 8.5 1.2 1 0 0 1 1 1 0 MMPL family YfhO PF09586.10 ORF6748 - 3.3 5.8 12.6 4.2 5.5 0.4 2.0 2 0 0 2 2 2 0 Bacterial membrane protein YfhO Cdc6_C PF09079.11 ORF61682 - 1.2e-07 31.6 0.1 5.7e-07 29.4 0.0 2.1 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain TMV_coat PF00721.21 ORF61682 - 0.016 15.0 0.1 0.035 13.9 0.0 1.6 2 0 0 2 2 2 0 Virus coat protein (TMV like) End3 PF12761.7 ORF61462 - 0.03 14.5 3.9 0.046 13.9 3.9 1.2 1 0 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 PSI_PsaF PF02507.15 ORF59849 - 3.7e-41 140.8 0.1 5.7e-41 140.2 0.1 1.2 1 0 0 1 1 1 1 Photosystem I reaction centre subunit III Levi_coat PF01819.17 ORF59849 - 0.12 12.4 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Levivirus coat protein DUF2300 PF10062.9 ORF54672 - 0.0027 17.8 1.7 0.005 16.9 0.1 2.0 2 0 0 2 2 2 1 Predicted secreted protein (DUF2300) NinF PF05810.12 ORF53883 - 0.19 11.6 3.8 0.51 10.2 3.8 1.7 1 0 0 1 1 1 0 NinF protein Amidase PF01425.21 ORF50712 - 1.6e-07 30.6 0.0 2.6e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Amidase Glyco_transf_34 PF05637.12 ORF49925 - 8.9e-18 64.9 0.7 5.3e-08 32.9 0.0 2.9 2 2 0 2 2 2 2 galactosyl transferase GMA12/MNN10 family Nucleotid_trans PF03407.16 ORF49925 - 4.5e-05 23.5 0.3 8.7e-05 22.6 0.0 1.5 2 0 0 2 2 2 1 Nucleotide-diphospho-sugar transferase Glyco_tranf_2_4 PF13704.6 ORF49925 - 0.063 13.8 0.3 0.14 12.6 0.3 1.7 1 1 0 1 1 1 0 Glycosyl transferase family 2 DUF273 PF03314.14 ORF49925 - 0.16 11.5 0.1 2 7.9 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function, DUF273 CLP1_P PF16575.5 ORF47582 - 0.083 12.7 2.8 2.2 8.1 0.2 2.1 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop CAP_N PF01213.19 ORF47582 - 8.1 5.8 12.6 0.083 12.4 4.4 1.7 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) N terminal HATPase_c PF02518.26 ORF46276 - 1.9e-19 70.2 0.0 3e-19 69.6 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPOB_a PF14689.6 ORF46276 - 6e-11 41.9 0.7 6e-11 41.9 0.7 2.0 2 0 0 2 2 2 1 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_5 PF14501.6 ORF46276 - 3.5e-10 39.7 0.0 3.4e-08 33.3 0.0 2.2 2 0 0 2 2 2 1 GHKL domain HATPase_c_2 PF13581.6 ORF46276 - 8.7e-06 25.7 0.0 1.3e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 ORF46276 - 0.0038 17.1 0.0 0.0065 16.3 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ArgoMid PF16487.5 ORF45975 - 0.014 15.7 0.6 0.043 14.1 0.1 2.2 3 0 0 3 3 3 0 Mid domain of argonaute CYSTM PF12734.7 ORF38676 - 0.12 12.7 0.6 0.12 12.7 0.6 2.5 2 0 0 2 2 2 0 Cysteine-rich TM module stress tolerance DHHC PF01529.20 ORF38676 - 0.28 11.3 10.9 3.1 7.9 3.8 2.2 2 0 0 2 2 2 0 DHHC palmitoyltransferase DUF962 PF06127.11 ORF38676 - 0.29 11.3 2.8 1.3 9.2 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF962) Phage_holin_3_6 PF07332.11 ORF38676 - 0.44 10.6 1.5 1.6 8.8 0.1 2.2 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Cornifin PF02389.15 ORF32365 - 5 7.3 12.3 13 6.0 11.8 1.9 1 1 0 1 1 1 0 Cornifin (SPRR) family Pkinase PF00069.25 ORF28663 - 1.3e-67 227.9 0.1 1.5e-67 227.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF28663 - 2.4e-38 131.9 0.0 2.9e-38 131.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF28663 - 8.2e-06 25.3 0.1 0.00011 21.7 0.0 2.0 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF28663 - 6.5e-05 22.4 0.0 0.00075 18.9 0.0 2.2 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 ORF28663 - 0.0012 17.7 0.0 0.0014 17.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF28663 - 0.0016 18.4 0.0 0.0043 17.0 0.0 1.6 2 0 0 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF28663 - 0.03 13.9 0.6 0.044 13.4 0.6 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Haspin_kinase PF12330.8 ORF28663 - 0.038 12.9 0.7 0.13 11.1 0.7 1.7 1 1 0 1 1 1 0 Haspin like kinase domain DUF1679 PF07914.11 ORF28663 - 0.045 12.6 0.0 0.11 11.4 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1679) BTB PF00651.31 ORF25730 - 1.1e-22 80.4 1.3 2e-22 79.5 0.6 1.9 1 1 0 1 1 1 1 BTB/POZ domain BACK PF07707.15 ORF25730 - 1.8e-05 24.8 0.5 0.0031 17.6 0.1 2.6 2 0 0 2 2 2 2 BTB And C-terminal Kelch PRESAN PF09687.10 ORF25730 - 0.061 13.9 7.1 2.8 8.5 3.3 2.4 2 0 0 2 2 2 0 Plasmodium RESA N-terminal Rx_N PF18052.1 ORF19387 - 0.2 12.0 3.7 0.83 10.0 3.8 1.9 1 1 0 1 1 1 0 Rx N-terminal domain HSCB_C PF07743.13 ORF19387 - 0.27 11.7 4.1 3.3 8.3 4.1 2.4 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain BNR_assoc_N PF14873.6 ORF18952 - 0.099 12.3 2.6 4.9 6.8 0.2 2.3 2 0 0 2 2 2 0 N-terminal domain of BNR-repeat neuraminidase DUF2373 PF10180.9 ORF18952 - 0.4 10.6 2.4 0.99 9.3 2.4 1.9 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2373) TPR_1 PF00515.28 ORF15859 - 0.0013 18.4 2.0 1.2 9.1 0.0 3.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF15859 - 0.0029 17.6 0.7 3.3 8.1 1.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat DUF5097 PF17020.5 ORF15859 - 0.023 15.0 1.4 0.043 14.2 0.8 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF5097) TspO_MBR PF03073.15 ORF15774 - 1.1e-15 57.9 6.9 1.1e-15 57.9 6.9 1.8 2 0 0 2 2 2 1 TspO/MBR family BMC PF00936.19 ORF15774 - 0.11 12.5 0.1 0.21 11.6 0.1 1.4 1 0 0 1 1 1 0 BMC domain DUF3043 PF11241.8 ORF15774 - 0.23 11.5 0.9 0.36 10.8 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3043) DUF1499 PF07386.11 ORF15646 - 0.035 14.7 0.0 0.052 14.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1499) HAUS-augmin3 PF14932.6 ORF151232 - 0.078 12.6 29.0 0.13 11.8 21.7 2.5 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Fib_alpha PF08702.10 ORF151232 - 0.18 12.0 13.9 1.1 9.5 1.1 3.2 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Spc7 PF08317.11 ORF151232 - 0.3 9.9 31.5 1.4 7.7 20.7 2.6 1 1 2 3 3 3 0 Spc7 kinetochore protein Filament PF00038.21 ORF151232 - 0.66 9.5 31.6 1.4 8.5 19.6 2.4 1 1 1 2 2 2 0 Intermediate filament protein AAA_13 PF13166.6 ORF151232 - 1.3 7.5 20.5 1.9 7.0 20.5 1.2 1 0 0 1 1 1 0 AAA domain Rx_N PF18052.1 ORF151232 - 7.9 6.8 14.8 1 9.7 1.0 3.4 1 1 0 3 3 3 0 Rx N-terminal domain Rhomboid PF01694.22 ORF149998 - 1.4e-05 25.1 10.5 2.3e-05 24.4 10.5 1.3 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 ORF149998 - 0.0038 17.8 7.4 0.0038 17.8 7.4 2.1 3 0 0 3 3 3 1 Eukaryotic integral membrane protein (DUF1751) dCache_2 PF08269.11 ORF149998 - 0.14 11.3 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 Cache domain Fe_hyd_SSU PF02256.17 ORF148916 - 0.00039 20.4 2.3 0.13 12.4 0.1 3.0 3 0 0 3 3 3 2 Iron hydrogenase small subunit Cnn_1N PF07989.11 ORF145590 - 0.031 14.4 6.3 0.031 14.4 6.3 2.7 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 Vir_act_alpha_C PF10400.9 ORF145590 - 0.094 13.4 3.0 3.1 8.6 0.1 2.7 2 0 0 2 2 2 0 Virulence activator alpha C-term CCDC85 PF10226.9 ORF145590 - 0.63 9.7 9.7 0.046 13.4 3.5 2.2 2 1 1 3 3 3 0 CCDC85 family DUF1664 PF07889.12 ORF145590 - 3.6 7.6 7.9 0.72 9.9 2.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Tho2 PF11262.8 ORF145119 - 0.0014 17.8 18.4 0.0083 15.4 0.6 2.8 2 1 1 3 3 3 2 Transcription factor/nuclear export subunit protein 2 DUF4570 PF15134.6 ORF145119 - 0.0047 16.9 9.2 0.0047 16.9 9.2 2.8 2 1 0 3 3 3 1 Domain of unknown function (DUF4570) DUF4407 PF14362.6 ORF145119 - 0.0075 15.7 3.4 0.0075 15.7 3.4 2.4 2 1 0 2 2 2 1 Domain of unknown function (DUF4407) HOOK PF05622.12 ORF145119 - 0.009 14.2 29.4 0.011 13.9 29.4 1.0 1 0 0 1 1 1 1 HOOK protein Csm1_N PF18504.1 ORF145119 - 0.064 13.6 0.4 0.064 13.6 0.4 5.4 3 2 3 6 6 6 0 Csm1 N-terminal domain DUF1664 PF07889.12 ORF145119 - 0.074 13.1 17.7 0.039 14.0 4.2 3.5 3 1 1 4 4 4 0 Protein of unknown function (DUF1664) Thioredoxin_5 PF13743.6 ORF145119 - 0.13 12.0 3.5 0.23 11.1 3.5 1.3 1 0 0 1 1 1 0 Thioredoxin Spc7 PF08317.11 ORF145119 - 0.7 8.7 36.3 0.39 9.5 4.2 3.2 1 1 1 3 3 3 0 Spc7 kinetochore protein IZUMO PF15005.6 ORF145119 - 6.3 7.3 10.3 2.4 8.6 4.1 2.5 1 1 1 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated GAS PF13851.6 ORF145119 - 9.1 5.6 33.5 1.4 8.2 0.4 3.7 3 1 0 3 3 3 0 Growth-arrest specific micro-tubule binding DUF957 PF06117.11 ORF144950 - 0.0046 16.5 1.7 0.0095 15.5 0.1 2.2 2 0 0 2 2 2 1 Enterobacterial protein of unknown function (DUF957) Atg14 PF10186.9 ORF144950 - 0.016 14.3 2.7 0.023 13.8 2.7 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Seryl_tRNA_N PF02403.22 ORF144950 - 0.021 15.1 5.3 0.055 13.7 5.3 1.7 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF4200 PF13863.6 ORF144950 - 0.033 14.6 7.6 0.063 13.7 7.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) TolA_bind_tri PF16331.5 ORF144950 - 0.068 13.3 6.8 0.13 12.4 6.8 1.5 1 0 0 1 1 1 0 TolA binding protein trimerisation DUF1664 PF07889.12 ORF144950 - 0.17 11.9 3.7 0.54 10.3 3.8 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Tli4_N PF18443.1 ORF144950 - 0.24 11.8 2.2 0.47 10.8 2.2 1.5 1 0 0 1 1 1 0 Tle cognate immunity protein 4 N-terminal domain Fib_alpha PF08702.10 ORF144950 - 0.33 11.1 10.0 0.24 11.6 8.0 1.8 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF144950 - 0.45 9.7 5.6 0.7 9.1 5.6 1.2 1 0 0 1 1 1 0 TMPIT-like protein DUF3450 PF11932.8 ORF144950 - 0.67 9.2 6.5 1 8.6 6.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DDE_1 PF03184.19 ORF144805 - 1.2e-11 44.6 0.0 1.5e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_3 PF13358.6 ORF144805 - 0.00051 19.8 0.2 0.011 15.5 0.0 2.4 2 1 0 2 2 2 1 DDE superfamily endonuclease DSPc PF00782.20 ORF144647 - 6.5e-09 35.7 0.1 1.2e-08 34.8 0.1 1.5 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain NadA PF02445.16 ORF142451 - 3.4e-91 305.5 0.0 3.8e-91 305.4 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein MMPL PF03176.15 ORF138888 - 0.03 13.3 17.6 0.02 13.8 15.9 1.4 1 1 0 1 1 1 0 MMPL family Patched PF02460.18 ORF138888 - 0.031 12.4 19.3 0.038 12.1 19.3 1.1 1 0 0 1 1 1 0 Patched family MORN PF02493.20 ORF131036 - 3.1e-52 171.4 76.1 9.2e-08 31.5 1.3 9.9 10 0 0 10 10 10 9 MORN repeat DUF1499 PF07386.11 ORF123654 - 0.035 14.7 0.0 0.052 14.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1499) tRNA_U5-meth_tr PF05958.11 ORF122552 - 2.5e-49 168.2 0.0 2.4e-47 161.6 0.0 2.1 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_15 PF09445.10 ORF122552 - 3.2e-07 30.1 0.0 4.7e-07 29.5 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltr_RsmB-F PF01189.17 ORF122552 - 7.3e-05 22.5 0.1 0.00011 21.9 0.1 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F MTS PF05175.14 ORF122552 - 8.3e-05 22.2 0.0 0.00012 21.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 ORF122552 - 0.00024 21.7 0.0 0.00092 19.9 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF122552 - 0.013 15.3 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 ORF122552 - 0.05 13.0 0.2 0.071 12.5 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.6 ORF122552 - 0.05 13.4 0.0 0.083 12.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 ORF122552 - 0.053 14.2 0.0 0.1 13.3 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 ORF122552 - 0.06 13.1 0.0 0.099 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 ORF122552 - 0.091 11.8 0.0 0.14 11.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DREV PF05219.12 ORF122552 - 0.17 11.0 0.0 0.29 10.2 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase Sugar_tr PF00083.24 ORF121731 - 2.1e-62 211.5 10.6 2.4e-62 211.3 10.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF121731 - 1.4e-22 80.1 9.7 1.7e-22 79.9 9.7 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF121731 - 0.0001 21.0 3.8 0.0001 21.0 3.8 1.6 2 0 0 2 2 2 1 MFS/sugar transport protein TRI12 PF06609.13 ORF121731 - 0.00028 19.4 7.1 0.00035 19.1 7.1 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) Phage_holin_3_2 PF04550.12 ORF121731 - 0.024 15.1 5.8 0.024 15.1 5.8 2.7 2 2 0 2 2 2 0 Phage holin family 2 Glycoprotein_B PF00606.18 ORF121731 - 0.15 11.5 0.1 0.23 10.8 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus Glycoprotein B ectodomain DUF3021 PF11457.8 ORF119782 - 0.019 15.3 6.9 0.029 14.7 6.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF2776 PF10951.8 ORF119782 - 0.05 12.9 4.6 0.07 12.4 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) EOS1 PF12326.8 ORF119782 - 0.13 12.2 0.5 0.25 11.3 0.5 1.6 1 1 0 1 1 1 0 N-glycosylation protein TMEM208_SND2 PF05620.11 ORF119782 - 0.21 11.4 4.6 0.48 10.2 4.6 1.8 1 1 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 HA2 PF04408.23 ORF119782 - 0.41 11.0 2.5 1.1 9.6 2.5 1.8 1 1 0 1 1 1 0 Helicase associated domain (HA2) DUF3086 PF11285.8 ORF119782 - 0.42 9.7 4.6 0.51 9.4 3.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3086) DUF3671 PF12420.8 ORF116818 - 0.00086 19.4 5.0 0.086 12.9 0.7 2.4 1 1 1 2 2 2 2 Protein of unknown function 7TM_GPCR_Srw PF10324.9 ORF116818 - 0.0078 15.5 1.2 0.0078 15.5 1.2 1.4 2 0 0 2 2 2 1 Serpentine type 7TM GPCR chemoreceptor Srw Sigma_reg_N PF13800.6 ORF116818 - 0.033 14.5 3.3 2.9 8.2 0.2 3.1 3 0 0 3 3 3 0 Sigma factor regulator N-terminal DUF4064 PF13273.6 ORF116818 - 0.27 11.5 5.2 2.4 8.5 0.8 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF4064) DUF1600 PF07667.11 ORF116818 - 1.1 9.5 6.4 0.97 9.6 3.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1600) MFS_1 PF07690.16 ORF115822 - 2.2e-10 40.0 22.2 9.1e-05 21.5 0.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Phage_Gp111 PF07410.11 ORF107693 - 0.32 11.5 2.6 1.7 9.1 0.1 2.5 2 0 0 2 2 2 0 Streptococcus thermophilus bacteriophage Gp111 protein Mito_fiss_reg PF05308.11 ORF103051 - 0.2 11.7 3.7 0.29 11.2 3.7 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 ORF103051 - 2.7 7.4 6.6 4 6.8 6.6 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal WD40 PF00400.32 NODE_25567_length_826_cov_2.041719_g19967_i0forward_frame_1 - 4.6e-15 55.8 8.6 0.00013 22.7 0.1 6.2 7 0 0 7 7 7 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_25567_length_826_cov_2.041719_g19967_i0forward_frame_1 - 8.3e-10 38.8 0.5 0.012 15.9 0.0 4.2 1 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 NODE_25567_length_826_cov_2.041719_g19967_i0forward_frame_1 - 4e-05 22.5 1.5 0.028 13.1 0.4 2.5 1 1 2 3 3 3 2 Nucleoporin Nup120/160 WD40_like PF17005.5 NODE_25567_length_826_cov_2.041719_g19967_i0forward_frame_1 - 0.0002 20.8 1.8 0.071 12.4 0.1 2.6 2 1 1 3 3 3 2 WD40-like domain DUF3847 PF12958.7 NODE_25508_length_827_cov_117.622475_g18738_i1forward_frame_1 - 0.17 12.0 5.6 13 6.0 1.5 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3847) DUF3888 PF13027.6 NODE_25368_length_830_cov_8595.616352_g9198_i6forward_frame_3 - 0.0065 16.9 0.2 0.018 15.5 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3888) Lipocalin_2 PF08212.12 ORF98812 - 4.2e-06 26.8 0.0 0.03 14.2 0.0 2.1 2 0 0 2 2 2 2 Lipocalin-like domain Lipocalin PF00061.23 ORF98812 - 0.029 14.6 0.0 0.11 12.7 0.0 1.8 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family Gluconate_2-dh3 PF13618.6 ORF98741 - 0.18 12.1 0.1 0.39 11.0 0.1 1.5 1 0 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 MORN PF02493.20 ORF96694 - 5.1e-24 82.7 32.0 3.2e-07 29.9 0.3 5.8 6 0 0 6 6 6 5 MORN repeat Sugar_tr PF00083.24 ORF88609 - 1.4e-09 37.4 10.9 6.7e-09 35.1 8.7 2.3 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 ORF88609 - 0.00018 20.6 16.1 0.00071 18.6 16.1 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily S1FA PF04689.13 ORF88609 - 0.16 12.1 2.0 1.7 8.8 0.9 2.6 2 0 0 2 2 2 0 DNA binding protein S1FA GCS PF03074.16 ORF87896 - 4.5e-62 210.5 0.0 5.3e-62 210.3 0.0 1.0 1 0 0 1 1 1 1 Glutamate-cysteine ligase Rhomboid PF01694.22 ORF87837 - 4.3e-29 101.5 14.7 4.3e-29 101.5 14.7 1.7 2 0 0 2 2 2 1 Rhomboid family Rhomboid_N PF12122.8 ORF87837 - 6.1e-29 100.0 0.1 1.1e-28 99.2 0.1 1.4 1 0 0 1 1 1 1 Cytoplasmic N-terminal domain of rhomboid serine protease DUF485 PF04341.12 ORF87837 - 4.7 7.2 7.2 2.4 8.2 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function, DUF485 FlxA PF14282.6 ORF8554 - 0.0016 18.4 4.1 0.0016 18.4 4.1 3.1 2 1 0 2 2 2 1 FlxA-like protein DASH_Spc19 PF08287.11 ORF8554 - 0.0031 17.4 19.2 0.01 15.8 15.5 2.3 2 0 0 2 2 2 1 Spc19 DUF4407 PF14362.6 ORF8554 - 0.011 15.1 19.3 0.033 13.5 19.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) COG5 PF10392.9 ORF8554 - 0.028 14.6 1.9 2 8.6 0.2 2.6 2 0 0 2 2 2 0 Golgi transport complex subunit 5 Med30 PF11315.8 ORF8554 - 0.053 13.7 8.7 0.061 13.5 6.3 2.0 2 0 0 2 2 2 0 Mediator complex subunit 30 SGT1 PF07093.11 ORF8554 - 0.068 11.6 14.5 0.082 11.3 14.5 1.2 1 0 0 1 1 1 0 SGT1 protein Rootletin PF15035.6 ORF8554 - 0.097 12.7 14.6 0.2 11.6 14.6 1.5 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion SlyX PF04102.12 ORF8554 - 0.099 13.3 0.1 0.099 13.3 0.1 3.1 2 1 0 2 2 2 0 SlyX Csm1_N PF18504.1 ORF8554 - 0.1 13.0 0.5 0.1 13.0 0.5 3.5 2 1 1 3 3 3 0 Csm1 N-terminal domain CDC27 PF09507.10 ORF8554 - 0.25 10.7 31.0 0.32 10.4 31.0 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 DUF3584 PF12128.8 ORF8554 - 0.27 8.7 22.4 0.05 11.1 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) Prefoldin_2 PF01920.20 ORF8554 - 1.7 8.6 28.1 0.061 13.3 11.3 3.5 3 0 0 3 3 3 0 Prefoldin subunit TINF2_N PF14973.6 ORF8554 - 1.8 8.9 7.6 1.9 8.9 0.0 3.0 3 1 0 3 3 3 0 TERF1-interacting nuclear factor 2 N-terminus DUF4665 PF15679.5 ORF8554 - 2.8 8.6 15.8 1.7 9.3 0.3 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4665) HemX PF04375.14 ORF8554 - 2.9 7.1 13.2 0.59 9.4 9.3 1.8 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase NPV_P10 PF05531.12 ORF8554 - 2.9 8.4 11.4 4 8.0 1.8 3.3 4 1 0 4 4 3 0 Nucleopolyhedrovirus P10 protein DUF812 PF05667.11 ORF8554 - 3 6.6 32.6 9.4 5.0 32.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Fez1 PF06818.15 ORF8554 - 4 7.9 24.9 9.4 6.6 17.8 2.2 2 0 0 2 2 2 0 Fez1 DASH_Dam1 PF08653.10 ORF8554 - 7.4 6.5 7.1 11 6.0 0.8 3.3 3 1 1 4 4 4 0 DASH complex subunit Dam1 V_ATPase_I PF01496.19 ORF8554 - 8.1 4.2 15.6 8.7 4.1 14.6 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family FliD_N PF02465.18 ORF8554 - 8.2 7.2 11.8 2.7 8.7 3.0 2.9 2 2 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Spc7 PF08317.11 ORF8554 - 9.7 5.0 25.2 14 4.4 0.3 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein Cortex-I_coil PF09304.10 ORF7566 - 0.039 14.2 0.6 0.12 12.6 0.1 2.1 2 0 0 2 2 2 0 Cortexillin I, coiled coil OB_NTP_bind PF07717.16 ORF7506 - 3.5e-15 56.1 0.1 7.3e-15 55.1 0.1 1.6 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 ORF7506 - 0.037 14.4 0.0 0.08 13.3 0.0 1.5 2 0 0 2 2 2 0 Helicase conserved C-terminal domain PARP PF00644.20 ORF74796 - 4.6e-06 26.4 0.0 7.6e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain PTS_2-RNA PF01885.16 ORF74796 - 0.015 15.3 0.0 0.028 14.5 0.0 1.4 1 0 0 1 1 1 0 RNA 2'-phosphotransferase, Tpt1 / KptA family Lipocalin_2 PF08212.12 ORF72648 - 4.2e-06 26.8 0.0 0.03 14.2 0.0 2.1 2 0 0 2 2 2 2 Lipocalin-like domain Lipocalin PF00061.23 ORF72648 - 0.029 14.6 0.0 0.11 12.7 0.0 1.8 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family Band_3_cyto PF07565.13 ORF72178 - 0.092 12.5 0.1 0.17 11.7 0.1 1.3 1 0 0 1 1 1 0 Band 3 cytoplasmic domain IKBKB_SDD PF18397.1 ORF72178 - 0.16 11.2 2.0 0.11 11.7 0.3 1.6 2 0 0 2 2 2 0 IQBAL scaffold dimerization domain MHC_I_C PF06623.11 ORF71501 - 0.039 13.9 0.0 5.7 6.9 0.0 2.8 2 0 0 2 2 2 0 MHC_I C-terminus AP2 PF00847.20 ORF64978 - 0.4 11.0 3.2 0.22 11.8 0.5 2.0 2 0 0 2 2 2 0 AP2 domain BET PF17035.5 ORF60878 - 0.032 14.4 1.0 0.032 14.4 1.0 2.3 2 0 0 2 2 2 0 Bromodomain extra-terminal - transcription regulation Pup PF05639.11 ORF60878 - 1.3 10.0 6.6 16 6.5 1.1 3.2 3 0 0 3 3 3 0 Pup-like protein DUF3450 PF11932.8 ORF60878 - 1.3 8.3 9.7 0.16 11.3 5.3 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) YabA PF06156.13 ORF6059 - 0.00086 19.9 0.4 0.002 18.7 0.4 1.6 1 0 0 1 1 1 1 Initiation control protein YabA TIM PF00121.18 ORF60453 - 9.2e-81 270.8 0.0 1.1e-80 270.6 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase AP2 PF00847.20 ORF57903 - 0.4 11.0 3.2 0.22 11.8 0.5 2.0 2 0 0 2 2 2 0 AP2 domain DnaJ PF00226.31 ORF54819 - 2.1e-16 59.8 0.7 5.7e-16 58.4 0.7 1.8 1 0 0 1 1 1 1 DnaJ domain RPT PF13446.6 ORF54819 - 0.0044 16.9 0.1 0.0092 15.9 0.1 1.5 1 0 0 1 1 1 1 A repeated domain in UCH-protein Atrophin-1 PF03154.15 ORF54819 - 2.4 6.4 8.0 3.2 5.9 8.0 1.1 1 0 0 1 1 1 0 Atrophin-1 family TPR_14 PF13428.6 ORF50833 - 4.4e-10 39.5 1.6 0.0012 19.5 0.0 4.9 1 1 4 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF50833 - 2.4e-05 24.7 0.0 0.56 10.8 0.0 4.0 2 1 3 5 5 5 2 Tetratricopeptide repeat HAT PF02184.16 ORF50833 - 0.00022 21.1 9.5 0.056 13.4 0.0 4.6 5 0 0 5 5 5 2 HAT (Half-A-TPR) repeat TPR_6 PF13174.6 ORF50833 - 0.005 17.4 0.6 9.6 7.1 0.0 4.4 3 2 1 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF50833 - 0.014 15.5 0.2 3.6 7.9 0.0 3.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 ORF50833 - 0.12 13.0 0.1 1.9 9.2 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TP_methylase PF00590.20 ORF464 - 3e-14 53.5 0.0 3.8e-14 53.1 0.0 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF4378 PF14309.6 ORF45928 - 2.8e-08 34.3 2.8 1.8e-07 31.7 2.8 2.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4378) Plant_all_beta PF10532.9 ORF45928 - 0.0038 17.5 1.5 0.01 16.1 1.5 1.7 1 0 0 1 1 1 1 Plant specific N-all beta domain Mitoc_L55 PF09776.9 ORF45928 - 1.6 8.5 5.7 0.97 9.2 3.3 1.9 2 0 0 2 2 2 0 Mitochondrial ribosomal protein L55 RBP_receptor PF14752.6 ORF44720 - 3.9e-09 35.7 5.8 5.1e-09 35.3 5.8 1.2 1 0 0 1 1 1 1 Retinol binding protein receptor Neur_chan_memb PF02932.16 ORF44720 - 2 8.4 5.5 4 7.4 5.5 1.6 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Hid1 PF12722.7 ORF44720 - 4.5 5.3 14.8 5.9 4.9 14.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein SDA1 PF05285.12 ORF44720 - 5.9 6.2 28.7 8.2 5.8 28.7 1.2 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 ORF44720 - 8 4.5 27.2 10 4.2 27.2 1.2 1 0 0 1 1 1 0 Nop14-like family Aminotran_1_2 PF00155.21 ORF44168 - 1.8e-30 106.4 0.0 2.2e-30 106.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II CVNH PF08881.10 ORF43294 - 0.00069 20.3 0.6 0.11 13.2 0.0 2.1 1 1 1 3 3 3 2 CVNH domain FlxA PF14282.6 ORF42266 - 0.0016 18.4 4.1 0.0016 18.4 4.1 3.1 2 1 0 2 2 2 1 FlxA-like protein DASH_Spc19 PF08287.11 ORF42266 - 0.0031 17.4 19.2 0.01 15.8 15.5 2.3 2 0 0 2 2 2 1 Spc19 DUF4407 PF14362.6 ORF42266 - 0.011 15.1 19.3 0.033 13.5 19.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) COG5 PF10392.9 ORF42266 - 0.028 14.6 1.9 2 8.6 0.2 2.6 2 0 0 2 2 2 0 Golgi transport complex subunit 5 Med30 PF11315.8 ORF42266 - 0.053 13.7 8.7 0.061 13.5 6.3 2.0 2 0 0 2 2 2 0 Mediator complex subunit 30 SGT1 PF07093.11 ORF42266 - 0.068 11.6 14.5 0.082 11.3 14.5 1.2 1 0 0 1 1 1 0 SGT1 protein Rootletin PF15035.6 ORF42266 - 0.097 12.7 14.6 0.2 11.6 14.6 1.5 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion SlyX PF04102.12 ORF42266 - 0.099 13.3 0.1 0.099 13.3 0.1 3.1 2 1 0 2 2 2 0 SlyX Csm1_N PF18504.1 ORF42266 - 0.1 13.0 0.5 0.1 13.0 0.5 3.5 2 1 1 3 3 3 0 Csm1 N-terminal domain CDC27 PF09507.10 ORF42266 - 0.25 10.7 31.0 0.32 10.4 31.0 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 DUF3584 PF12128.8 ORF42266 - 0.27 8.7 22.4 0.05 11.1 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) Prefoldin_2 PF01920.20 ORF42266 - 1.7 8.6 28.1 0.061 13.3 11.3 3.5 3 0 0 3 3 3 0 Prefoldin subunit TINF2_N PF14973.6 ORF42266 - 1.8 8.9 7.6 1.9 8.9 0.0 3.0 3 1 0 3 3 3 0 TERF1-interacting nuclear factor 2 N-terminus DUF4665 PF15679.5 ORF42266 - 2.8 8.6 15.8 1.7 9.3 0.3 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4665) HemX PF04375.14 ORF42266 - 2.9 7.1 13.2 0.59 9.4 9.3 1.8 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase NPV_P10 PF05531.12 ORF42266 - 2.9 8.4 11.4 4 8.0 1.8 3.3 4 1 0 4 4 3 0 Nucleopolyhedrovirus P10 protein DUF812 PF05667.11 ORF42266 - 3 6.6 32.6 9.4 5.0 32.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Fez1 PF06818.15 ORF42266 - 4 7.9 24.9 9.4 6.6 17.8 2.2 2 0 0 2 2 2 0 Fez1 DASH_Dam1 PF08653.10 ORF42266 - 7.4 6.5 7.1 11 6.0 0.8 3.3 3 1 1 4 4 4 0 DASH complex subunit Dam1 V_ATPase_I PF01496.19 ORF42266 - 8.1 4.2 15.6 8.7 4.1 14.6 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family FliD_N PF02465.18 ORF42266 - 8.2 7.2 11.8 2.7 8.7 3.0 2.9 2 2 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Spc7 PF08317.11 ORF42266 - 9.7 5.0 25.2 14 4.4 0.3 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein Lipocalin_2 PF08212.12 ORF36656 - 4.2e-06 26.8 0.0 0.03 14.2 0.0 2.1 2 0 0 2 2 2 2 Lipocalin-like domain Lipocalin PF00061.23 ORF36656 - 0.029 14.6 0.0 0.11 12.7 0.0 1.8 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family APG5 PF04106.12 ORF36521 - 0.01 15.4 0.9 0.01 15.4 0.9 2.2 2 0 0 2 2 2 0 Autophagy protein Apg5 FNIP_M PF14637.6 ORF36521 - 0.034 14.1 3.4 0.078 13.0 1.0 2.1 2 0 0 2 2 2 0 Folliculin-interacting protein middle domain DUF1451 PF07295.11 ORF36521 - 0.15 12.1 3.6 7.4 6.6 0.4 2.3 2 0 0 2 2 2 0 Zinc-ribbon containing domain DUF4404 PF14357.6 ORF36521 - 0.79 10.4 4.7 1.9 9.2 0.6 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4404) Tn7_Tnp_TnsA_C PF08721.11 ORF36521 - 1.7 9.3 6.8 0.26 12.0 1.1 2.7 3 0 0 3 3 3 0 TnsA endonuclease C terminal AP2 PF00847.20 ORF33568 - 0.4 11.0 3.2 0.22 11.8 0.5 2.0 2 0 0 2 2 2 0 AP2 domain RRM_1 PF00076.22 ORF32021 - 1.7e-16 59.8 0.0 3.8e-16 58.7 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) U1snRNP70_N PF12220.8 ORF32021 - 0.0036 17.9 0.5 0.0036 17.9 0.5 3.3 2 1 1 3 3 3 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Vfa1 PF08432.10 ORF32021 - 0.63 10.4 25.5 0.11 12.8 18.7 2.2 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 Neur_chan_memb PF02932.16 ORF32021 - 2.2 8.3 10.1 3.1 7.8 10.1 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region DUF3053 PF11254.8 ORF3044 - 2.1e-93 312.0 4.4 2.4e-93 311.7 4.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3053) LIM PF00412.22 ORF30165 - 0.049 13.9 0.6 0.049 13.9 0.6 3.0 2 1 1 3 3 3 0 LIM domain Methyltransf_21 PF05050.12 ORF29923 - 3.4e-05 23.9 0.0 0.00011 22.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase FkbM domain EF-hand_1 PF00036.32 ORF22873 - 9.3e-07 28.0 0.4 9.6e-06 24.8 0.2 2.6 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 ORF22873 - 1e-06 28.2 0.5 9.7e-05 22.0 0.3 2.9 3 0 0 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 ORF22873 - 1.5e-05 25.3 0.2 6.4e-05 23.3 0.1 2.1 2 1 0 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF22873 - 8.9e-05 21.8 2.6 0.00011 21.5 0.9 2.2 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF22873 - 0.00017 21.3 0.1 0.00074 19.3 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain pair AP2 PF00847.20 ORF152365 - 0.4 11.0 3.2 0.22 11.8 0.5 2.0 2 0 0 2 2 2 0 AP2 domain Toxin-deaminase PF14424.6 ORF151674 - 0.0073 16.4 0.1 0.011 15.8 0.1 1.2 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases BTV_NS2 PF04514.12 ORF140099 - 0.019 13.8 5.7 0.028 13.2 5.7 1.3 1 0 0 1 1 1 0 Bluetongue virus non-structural protein NS2 Spore-coat_CotZ PF10612.9 ORF140099 - 9.1 6.4 8.7 0.42 10.8 1.2 2.4 3 0 0 3 3 3 0 Spore coat protein Z GRDP-like PF07173.12 ORF136743 - 0.00056 20.6 5.5 0.0047 17.6 1.9 2.6 1 1 1 2 2 2 2 Glycine-rich domain-containing protein-like Laps PF10169.9 ORF136743 - 0.2 12.3 3.3 0.18 12.3 1.8 1.8 1 1 1 2 2 2 0 Learning-associated protein NIF PF03031.18 ORF135283 - 3.2e-19 69.2 0.2 7.6e-19 68.0 0.2 1.6 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase FlxA PF14282.6 ORF132704 - 0.0016 18.4 4.1 0.0016 18.4 4.1 3.1 2 1 0 2 2 2 1 FlxA-like protein DASH_Spc19 PF08287.11 ORF132704 - 0.0031 17.4 19.2 0.01 15.8 15.5 2.3 2 0 0 2 2 2 1 Spc19 DUF4407 PF14362.6 ORF132704 - 0.011 15.1 19.3 0.033 13.5 19.1 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) COG5 PF10392.9 ORF132704 - 0.028 14.6 1.9 2 8.6 0.2 2.6 2 0 0 2 2 2 0 Golgi transport complex subunit 5 Med30 PF11315.8 ORF132704 - 0.053 13.7 8.7 0.061 13.5 6.3 2.0 2 0 0 2 2 2 0 Mediator complex subunit 30 SGT1 PF07093.11 ORF132704 - 0.068 11.6 14.5 0.082 11.3 14.5 1.2 1 0 0 1 1 1 0 SGT1 protein Rootletin PF15035.6 ORF132704 - 0.097 12.7 14.6 0.2 11.6 14.6 1.5 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion SlyX PF04102.12 ORF132704 - 0.099 13.3 0.1 0.099 13.3 0.1 3.1 2 1 0 2 2 2 0 SlyX Csm1_N PF18504.1 ORF132704 - 0.1 13.0 0.5 0.1 13.0 0.5 3.5 2 1 1 3 3 3 0 Csm1 N-terminal domain CDC27 PF09507.10 ORF132704 - 0.25 10.7 31.0 0.32 10.4 31.0 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 DUF3584 PF12128.8 ORF132704 - 0.27 8.7 22.4 0.05 11.1 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) Prefoldin_2 PF01920.20 ORF132704 - 1.7 8.6 28.1 0.061 13.3 11.3 3.5 3 0 0 3 3 3 0 Prefoldin subunit TINF2_N PF14973.6 ORF132704 - 1.8 8.9 7.6 1.9 8.9 0.0 3.0 3 1 0 3 3 3 0 TERF1-interacting nuclear factor 2 N-terminus DUF4665 PF15679.5 ORF132704 - 2.8 8.6 15.8 1.7 9.3 0.3 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4665) HemX PF04375.14 ORF132704 - 2.9 7.1 13.2 0.59 9.4 9.3 1.8 1 1 1 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase NPV_P10 PF05531.12 ORF132704 - 2.9 8.4 11.4 4 8.0 1.8 3.3 4 1 0 4 4 3 0 Nucleopolyhedrovirus P10 protein DUF812 PF05667.11 ORF132704 - 3 6.6 32.6 9.4 5.0 32.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Fez1 PF06818.15 ORF132704 - 4 7.9 24.9 9.4 6.6 17.8 2.2 2 0 0 2 2 2 0 Fez1 DASH_Dam1 PF08653.10 ORF132704 - 7.4 6.5 7.1 11 6.0 0.8 3.3 3 1 1 4 4 4 0 DASH complex subunit Dam1 V_ATPase_I PF01496.19 ORF132704 - 8.1 4.2 15.6 8.7 4.1 14.6 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family FliD_N PF02465.18 ORF132704 - 8.2 7.2 11.8 2.7 8.7 3.0 2.9 2 2 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Spc7 PF08317.11 ORF132704 - 9.7 5.0 25.2 14 4.4 0.3 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein TPR_4 PF07721.14 ORF128562 - 0.031 14.9 7.6 4.9 8.1 4.6 3.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Malate_synthase PF01274.22 ORF127022 - 8.5e-113 377.4 0.0 9.5e-113 377.2 0.0 1.0 1 0 0 1 1 1 1 Malate synthase Pkinase PF00069.25 ORF126821 - 2e-38 132.3 0.2 2.6e-38 131.9 0.2 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF126821 - 2.2e-27 96.0 0.0 2.5e-27 95.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF126821 - 6.6e-05 22.4 0.0 0.00065 19.1 0.0 2.2 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF126821 - 0.021 13.6 0.0 0.021 13.6 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase DUF4075 PF13294.6 ORF126821 - 0.095 12.9 0.7 0.18 12.0 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4075) FTA2 PF13095.6 ORF126821 - 0.16 11.5 0.7 0.48 10.0 0.7 1.9 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 zf-RING_11 PF17123.5 ORF121978 - 6.4e-05 22.6 5.1 0.00021 20.9 5.1 2.0 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 ORF121978 - 0.0022 18.3 8.6 0.0022 18.3 8.6 3.4 3 1 0 3 3 3 1 Ring finger domain Baculo_RING PF05883.11 ORF121978 - 0.01 15.8 2.7 0.014 15.4 1.0 2.0 2 0 0 2 2 2 0 Baculovirus U-box/Ring-like domain zf-HC5HC2H PF13771.6 ORF121978 - 0.015 15.6 3.3 0.015 15.6 3.3 3.1 2 1 0 2 2 2 0 PHD-like zinc-binding domain zf-rbx1 PF12678.7 ORF121978 - 0.016 15.5 2.4 0.016 15.5 2.4 3.0 3 0 0 3 3 3 0 RING-H2 zinc finger domain zinc_ribbon_9 PF14369.6 ORF121978 - 0.09 13.1 1.1 0.09 13.1 1.1 2.6 3 0 0 3 3 3 0 zinc-ribbon SET PF00856.28 ORF12161 - 6.8e-09 36.3 0.7 0.007 16.8 0.0 3.0 2 1 0 3 3 3 2 SET domain Amidase_2 PF01510.25 ORF118467 - 8.4e-26 90.9 0.0 1.5e-25 90.1 0.0 1.4 1 0 0 1 1 1 1 N-acetylmuramoyl-L-alanine amidase Galactosyl_T PF01762.21 ORF117629 - 2.3e-11 43.9 0.0 3.1e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 Galactosyltransferase Pkinase PF00069.25 ORF117337 - 3.5e-15 56.1 3.3 5.6e-15 55.4 0.1 2.4 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF117337 - 2.1e-05 23.9 0.6 4.3e-05 22.9 0.1 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase DUF728 PF05304.12 ORF117337 - 0.041 13.7 0.9 0.085 12.7 0.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF728) Phage_sheath_1C PF17482.2 ORF117337 - 0.27 11.2 3.6 0.73 9.8 2.2 2.4 2 1 0 2 2 2 0 Phage tail sheath C-terminal domain ADH_zinc_N PF00107.26 ORF111487 - 1.7e-12 47.5 0.0 2.5e-12 46.9 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 ORF111487 - 1.8e-10 40.7 0.1 3.8e-10 39.6 0.1 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 ORF111487 - 5.6e-06 26.0 0.0 1.3e-05 24.8 0.0 1.6 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus DUF2259 PF10016.9 ORF10960 - 0.18 11.7 0.8 0.28 11.1 0.8 1.3 1 0 0 1 1 1 0 Predicted secreted protein (DUF2259) GPCR_chapero_1 PF11904.8 ORF108309 - 1.2e-19 70.9 0.1 1.3e-13 51.1 0.1 2.1 1 1 1 2 2 2 2 GPCR-chaperone Lipocalin_2 PF08212.12 ORF102783 - 4.2e-06 26.8 0.0 0.03 14.2 0.0 2.1 2 0 0 2 2 2 2 Lipocalin-like domain Lipocalin PF00061.23 ORF102783 - 0.029 14.6 0.0 0.11 12.7 0.0 1.8 2 0 0 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family DUF3243 PF11588.8 NODE_25694_length_823_cov_83.019036_g20071_i0forward_frame_1 - 0.038 14.3 0.7 0.26 11.6 0.2 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF3243) HutP PF09021.11 NODE_25694_length_823_cov_83.019036_g20071_i0forward_frame_1 - 0.13 12.6 3.4 0.11 12.8 1.4 1.9 1 1 0 1 1 1 0 HutP DUF848 PF05852.11 NODE_25677_length_823_cov_231.154822_g19592_i1forward_frame_1 - 0.054 13.6 4.7 0.11 12.6 4.7 1.6 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) DUF1664 PF07889.12 NODE_25677_length_823_cov_231.154822_g19592_i1forward_frame_1 - 0.14 12.2 2.9 0.23 11.5 2.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Jnk-SapK_ap_N PF09744.9 NODE_25677_length_823_cov_231.154822_g19592_i1forward_frame_1 - 0.14 12.4 16.0 0.22 11.7 16.0 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 YlqD PF11068.8 NODE_25677_length_823_cov_231.154822_g19592_i1forward_frame_1 - 0.44 10.9 8.8 0.7 10.3 8.8 1.2 1 0 0 1 1 1 0 YlqD protein TMPIT PF07851.13 NODE_25677_length_823_cov_231.154822_g19592_i1forward_frame_1 - 2.2 7.5 6.6 3 7.0 6.6 1.1 1 0 0 1 1 1 0 TMPIT-like protein FapA PF03961.13 NODE_25677_length_823_cov_231.154822_g19592_i1forward_frame_1 - 2.3 6.7 4.5 3.1 6.3 4.5 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A IFP_35_N PF07334.13 NODE_25677_length_823_cov_231.154822_g19592_i1forward_frame_1 - 2.7 8.1 8.3 10 6.2 0.4 2.7 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus CALM_bind PF16025.5 NODE_25677_length_823_cov_231.154822_g19592_i1forward_frame_1 - 4.2 7.9 7.6 7.8 7.0 6.4 2.1 2 1 0 2 2 2 0 Calcium-dependent calmodulin binding MCU PF04678.13 NODE_25677_length_823_cov_231.154822_g19592_i1forward_frame_1 - 6.5 6.8 6.4 9.6 6.3 6.4 1.3 1 0 0 1 1 1 0 Mitochondrial calcium uniporter FAM76 PF16046.5 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.00072 19.0 47.5 0.022 14.1 23.7 2.4 1 1 1 2 2 2 2 FAM76 protein DUF883 PF05957.13 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.044 14.4 1.6 0.044 14.4 1.6 4.0 2 1 1 4 4 4 0 Bacterial protein of unknown function (DUF883) Herpes_UL33 PF03581.13 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.054 13.9 0.4 1.3 9.5 0.0 2.6 2 0 0 2 2 2 0 Herpesvirus UL33-like protein FUSC PF04632.12 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.068 11.7 1.5 0.074 11.6 1.5 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Filament PF00038.21 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.18 11.3 48.1 0.41 10.2 5.6 3.5 1 1 2 3 3 3 0 Intermediate filament protein Tropomyosin_1 PF12718.7 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.46 10.6 58.8 0.2 11.8 4.8 4.8 1 1 3 4 4 4 0 Tropomyosin like Atg14 PF10186.9 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.58 9.2 46.0 0.068 12.3 13.0 3.0 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 FAM184 PF15665.5 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 0.81 9.4 45.6 1.1 9.0 3.2 3.3 1 1 1 3 3 3 0 Family with sequence similarity 184, A and B Spc7 PF08317.11 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 3.2 6.6 55.6 0.11 11.4 19.7 2.9 1 1 0 2 2 2 0 Spc7 kinetochore protein ATG16 PF08614.11 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 3.7 7.7 48.4 0.61 10.3 11.7 3.5 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Pox_A_type_inc PF04508.12 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 6.1 6.9 8.9 2.2 8.3 0.1 4.8 4 0 0 4 4 4 0 Viral A-type inclusion protein repeat Fez1 PF06818.15 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 8 6.9 45.5 5.8 7.3 13.3 2.8 1 1 1 2 2 2 0 Fez1 CdvA PF18822.1 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 8.7 6.2 47.5 0.068 13.0 3.6 4.6 2 1 2 4 4 4 0 CdvA-like coiled-coil domain DUF3584 PF12128.8 NODE_25475_length_828_cov_82.978562_g19886_i0reverse_frame_2 - 9.2 3.6 46.4 0.21 9.1 30.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) Pro_isomerase PF00160.21 ORF96719 - 4.2e-44 150.6 0.0 7.3e-44 149.8 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LCE6A PF15858.5 ORF93846 - 6.6 7.6 15.6 38 5.1 15.6 2.4 1 1 0 1 1 1 0 Late cornified envelope protein 6A family PseudoU_synth_1 PF01416.20 ORF93352 - 2.7e-09 37.4 0.0 5.3e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 tRNA pseudouridine synthase DUF3802 PF12290.8 ORF8858 - 0.037 14.5 0.7 0.84 10.2 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3802) DUF5422 PF17459.2 ORF8858 - 0.11 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5422) Mito_carr PF00153.27 ORF86736 - 6.1e-16 58.1 1.3 3.7e-12 46.0 0.1 2.5 2 1 0 2 2 2 2 Mitochondrial carrier protein C2 PF00168.30 ORF86125 - 2.4e-19 69.5 0.0 3.6e-19 68.9 0.0 1.3 1 0 0 1 1 1 1 C2 domain SR-25 PF10500.9 ORF86125 - 0.1 12.2 9.5 0.15 11.7 9.5 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF755 PF05501.11 ORF86125 - 5 7.4 19.5 8.3 6.7 19.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Vps35 PF03635.17 ORF82656 - 1.2e-50 172.9 8.2 1.4e-50 172.7 8.2 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 MOR2-PAG1_C PF14225.6 ORF82656 - 0.0072 16.2 1.7 0.013 15.4 1.4 1.5 2 0 0 2 2 2 1 Cell morphogenesis C-terminal FAS_N PF17828.1 ORF82656 - 0.016 15.2 0.5 0.12 12.4 0.1 2.2 1 1 1 2 2 2 0 N-terminal domain in fatty acid synthase subunit beta CSN4_RPN5_eIF3a PF18420.1 ORF82656 - 0.073 13.2 0.1 0.28 11.4 0.0 2.0 1 1 0 1 1 1 0 CSN4/RPN5/eIF3a helix turn helix domain Tropomyosin_1 PF12718.7 ORF82429 - 0.001 19.2 3.9 0.0017 18.5 3.9 1.3 1 0 0 1 1 1 1 Tropomyosin like DUF4200 PF13863.6 ORF82429 - 0.0095 16.3 5.9 0.02 15.3 5.9 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) Laminin_II PF06009.12 ORF82429 - 0.01 15.9 2.4 0.01 15.9 2.4 1.8 2 0 0 2 2 2 0 Laminin Domain II DUF1664 PF07889.12 ORF82429 - 0.25 11.4 6.7 0.38 10.8 2.4 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) DUF725 PF05267.12 ORF82429 - 2.5 8.1 12.9 0.093 12.7 3.7 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF725) DUF2919 PF11143.8 ORF768 - 0.001 19.4 0.8 0.0016 18.8 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2919) Prok-E2_C PF14459.6 ORF73917 - 0.0033 17.6 18.9 0.73 10.0 1.9 3.1 3 0 0 3 3 3 3 Prokaryotic E2 family C GDH_N PF12466.8 ORF73530 - 0.12 12.6 0.1 0.24 11.6 0.1 1.5 1 0 0 1 1 1 0 Glutamate dehydrogenase N terminal RCC1 PF00415.18 ORF72325 - 4.7e-28 97.6 0.3 9.7e-12 45.3 0.0 5.5 5 1 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 ORF72325 - 1.8e-22 78.6 6.0 4.9e-08 32.6 0.1 5.1 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat Dynein_attach_N PF15867.5 ORF67735 - 5.4e-17 61.5 0.3 5.4e-17 61.5 0.3 2.0 2 0 0 2 2 2 1 Dynein attachment factor N-terminus RPAP3_C PF13877.6 ORF67735 - 5.4e-05 23.7 0.0 0.00011 22.7 0.0 1.6 1 0 0 1 1 1 1 Potential Monad-binding region of RPAP3 SelB-wing_2 PF09106.11 ORF67735 - 0.0099 16.1 0.1 0.048 13.9 0.2 2.2 2 0 0 2 2 2 1 Elongation factor SelB, winged helix adh_short PF00106.25 ORF6616 - 1.6e-11 44.0 0.0 3.4e-08 33.2 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 ORF6616 - 1.5e-09 37.8 0.0 2.1e-06 27.5 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase BLUF PF04940.12 ORF64100 - 0.019 15.1 0.0 0.067 13.3 0.0 2.0 1 0 0 1 1 1 0 Sensors of blue-light using FAD DUF725 PF05267.12 ORF64100 - 0.18 11.8 9.4 0.56 10.2 3.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF725) ALS_ss_C PF10369.9 ORF64100 - 0.21 11.8 1.0 1.6 9.0 0.1 2.7 3 1 0 3 3 3 0 Small subunit of acetolactate synthase DUF2570 PF10828.8 ORF64100 - 0.89 9.4 5.9 2.3 8.1 5.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2570) Laminin_II PF06009.12 ORF64100 - 1.1 9.3 8.4 0.26 11.3 2.4 2.7 3 1 0 3 3 3 0 Laminin Domain II DUF1664 PF07889.12 ORF64100 - 1.7 8.7 7.6 0.69 10.0 3.2 2.5 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) Alpha-2-MRAP_N PF06400.11 ORF63659 - 0.013 15.5 0.4 0.036 14.1 0.1 1.8 2 0 0 2 2 2 0 Alpha-2-macroglobulin RAP, N-terminal domain ATG27 PF09451.10 ORF61547 - 4.9e-10 39.7 1.2 7e-10 39.2 1.2 1.3 1 0 0 1 1 1 1 Autophagy-related protein 27 Man-6-P_recep PF02157.15 ORF61547 - 1.2e-05 24.5 2.4 2.1e-05 23.8 2.4 1.3 1 0 0 1 1 1 1 Mannose-6-phosphate receptor PRKCSH_1 PF13015.6 ORF61547 - 7e-05 22.6 1.1 0.00011 21.9 1.1 1.5 1 1 0 1 1 1 1 Glucosidase II beta subunit-like protein CIMR PF00878.18 ORF61547 - 8.2e-05 22.7 4.0 0.03 14.4 0.1 2.3 2 0 0 2 2 2 2 Cation-independent mannose-6-phosphate receptor repeat DUF2207 PF09972.9 ORF61547 - 0.096 11.4 1.5 0.13 11.0 1.4 1.7 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) SMN PF06003.12 ORF61547 - 0.13 11.5 0.4 0.18 11.1 0.4 1.3 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) CcmD PF04995.14 ORF61547 - 0.18 11.9 0.0 12 6.1 0.0 2.3 2 0 0 2 2 2 0 Heme exporter protein D (CcmD) TMCO5 PF14992.6 ORF61547 - 0.38 10.3 3.4 0.2 11.2 0.6 1.8 2 0 0 2 2 2 0 TMCO5 family DUF1583 PF07622.11 ORF56532 - 0.24 10.1 0.0 0.33 9.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1583) SBF2 PF12335.8 ORF54247 - 0.038 13.6 1.1 0.053 13.1 0.2 1.7 2 0 0 2 2 2 0 Myotubularin protein PPR PF01535.20 ORF50760 - 0.00031 20.8 0.3 2.6 8.5 0.1 3.8 4 0 0 4 4 4 2 PPR repeat PPR_2 PF13041.6 ORF50760 - 0.00058 20.0 0.0 0.62 10.3 0.0 3.2 3 0 0 3 3 3 2 PPR repeat family PPR_3 PF13812.6 ORF50760 - 0.0034 17.4 0.0 0.011 15.8 0.0 1.8 1 1 0 1 1 1 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF50760 - 0.14 11.9 0.4 43 3.9 0.0 3.3 3 0 0 3 3 3 0 PPR repeat 3HCDH_N PF02737.18 ORF50474 - 5.1e-50 169.9 1.2 6.3e-50 169.5 1.2 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 ORF50474 - 4.7e-33 113.7 0.0 1.7e-32 111.8 0.0 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GGA_N-GAT PF18308.1 ORF50474 - 0.035 13.7 0.0 0.062 12.9 0.0 1.4 1 0 0 1 1 1 0 GGA N-GAT domain SbcCD_C PF13558.6 ORF47973 - 4.1e-16 59.0 0.6 4.1e-16 59.0 0.6 1.8 2 0 0 2 2 2 1 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 ORF47973 - 4.4e-05 23.0 4.0 9.5e-05 21.9 4.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Fib_alpha PF08702.10 ORF47973 - 0.29 11.3 19.9 1.1 9.4 19.4 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 ORF47973 - 0.87 9.1 11.7 1.3 8.5 11.7 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit Phage_GPO PF05929.11 ORF47973 - 1.1 8.8 10.9 1.9 8.1 10.9 1.4 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase ALMT PF11744.8 ORF47973 - 1.7 7.3 5.1 1.9 7.3 5.1 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter PIN_8 PF18476.1 ORF47973 - 2.2 8.1 8.5 3.9 7.3 8.5 1.3 1 0 0 1 1 1 0 PIN like domain FUSC PF04632.12 ORF47973 - 2.5 6.5 9.1 3.1 6.2 9.1 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family TFIIA PF03153.13 ORF47973 - 3.4 7.6 15.8 4.5 7.2 15.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF1054 PF06335.12 ORF47973 - 5.8 6.8 8.3 12 5.8 8.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Spc7 PF08317.11 ORF47973 - 7.4 5.3 17.4 11 4.8 17.4 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF3958 PF13125.6 ORF47973 - 9.2 6.5 20.2 7.5 6.8 3.8 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3958) Otopetrin PF03189.13 ORF47746 - 0.003 16.5 0.0 0.004 16.0 0.0 1.2 1 0 0 1 1 1 1 Otopetrin GET2 PF08690.10 ORF47746 - 0.05 13.3 0.2 0.35 10.5 0.0 1.9 2 0 0 2 2 2 0 GET complex subunit GET2 DUF2207 PF09972.9 ORF47746 - 0.11 11.3 0.2 0.2 10.4 0.2 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) SurA_N_3 PF13624.6 ORF47746 - 0.23 11.2 0.2 0.23 11.2 0.2 2.2 3 0 0 3 3 3 0 SurA N-terminal domain SNARE PF05739.19 ORF47746 - 7.6 6.6 6.7 0.79 9.8 0.2 2.5 3 0 0 3 3 3 0 SNARE domain CitX PF03802.14 ORF44834 - 0.92 9.3 3.5 2.2 8.0 3.5 1.6 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Spc7 PF08317.11 ORF42022 - 0.0027 16.6 23.4 0.019 13.9 13.5 2.2 1 1 1 2 2 2 2 Spc7 kinetochore protein IPT PF01745.16 ORF42022 - 0.058 12.8 0.5 0.08 12.3 0.5 1.2 1 0 0 1 1 1 0 Isopentenyl transferase Telomere_res PF16684.5 ORF42022 - 0.079 12.4 9.3 0.02 14.4 6.0 1.6 1 1 1 2 2 2 0 Telomere resolvase HrpB7 PF09486.10 ORF42022 - 0.13 12.7 2.2 0.3 11.4 2.2 1.7 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) FAM76 PF16046.5 ORF42022 - 0.27 10.5 20.1 0.37 10.1 19.4 1.6 1 1 0 1 1 1 0 FAM76 protein V-SNARE PF05008.15 ORF42022 - 0.3 11.5 17.9 1.4 9.3 4.5 3.6 3 1 1 4 4 4 0 Vesicle transport v-SNARE protein N-terminus TPR_MLP1_2 PF07926.12 ORF42022 - 0.5 10.4 18.2 9.4 6.3 18.2 2.5 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 ORF42022 - 1.3 8.3 9.4 1.8 7.8 9.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) MscS_porin PF12795.7 ORF42022 - 1.5 8.3 15.8 1.4 8.4 9.3 2.2 1 1 0 2 2 2 0 Mechanosensitive ion channel porin domain V_ATPase_I PF01496.19 ORF42022 - 1.8 6.4 13.3 2.4 6.0 13.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family UPF0242 PF06785.11 ORF42022 - 1.9 8.6 23.8 2.3 8.3 20.3 2.5 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus NPV_P10 PF05531.12 ORF42022 - 2.1 8.9 7.0 4.6 7.8 3.5 2.8 1 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein GrpE PF01025.19 ORF42022 - 2.9 7.5 21.9 0.49 10.0 2.7 2.4 1 1 0 2 2 2 0 GrpE Snapin_Pallidin PF14712.6 ORF42022 - 3.9 8.0 14.7 7.5 7.0 4.7 3.0 1 1 2 3 3 3 0 Snapin/Pallidin Allexi_40kDa PF05549.11 ORF42022 - 5.7 6.4 10.0 1.6 8.1 6.2 1.9 2 1 0 2 2 2 0 Allexivirus 40kDa protein RP-C_C PF11800.8 ORF42022 - 7.1 6.7 7.4 8.7 6.4 6.9 1.5 1 1 0 1 1 1 0 Replication protein C C-terminal region Fez1 PF06818.15 ORF42022 - 8 6.9 22.7 16 5.9 13.9 2.2 1 1 1 2 2 2 0 Fez1 DUF1910 PF08928.10 ORF42022 - 8.2 6.5 17.0 5.7 7.0 4.2 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF1910) DUF848 PF05852.11 ORF42022 - 9.1 6.4 15.9 8.1 6.5 3.2 2.5 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) HABP4_PAI-RBP1 PF04774.15 ORF41414 - 0.24 12.2 2.4 0.4 11.5 2.4 1.3 1 0 0 1 1 1 0 Hyaluronan / mRNA binding family Oscp1 PF10188.9 ORF39849 - 2.4e-61 206.9 7.3 3e-61 206.6 7.3 1.1 1 0 0 1 1 1 1 Organic solute transport protein 1 Sterol-sensing PF12349.8 ORF39849 - 0.013 15.4 0.1 0.029 14.2 0.1 1.6 1 0 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation MFS_1 PF07690.16 ORF36354 - 2e-20 73.1 6.2 2.4e-20 72.8 6.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily UNC-93 PF05978.16 ORF36354 - 0.24 11.1 11.5 0.42 10.3 11.5 1.5 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 Lipoprotein_7 PF01540.16 ORF33809 - 0.021 14.1 2.9 0.037 13.3 2.9 1.4 1 0 0 1 1 1 0 Adhesin lipoprotein DUF4200 PF13863.6 ORF33809 - 0.035 14.5 6.7 0.071 13.5 6.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) Tropomyosin_1 PF12718.7 ORF33809 - 0.048 13.8 4.7 0.075 13.2 4.7 1.3 1 0 0 1 1 1 0 Tropomyosin like DUF1664 PF07889.12 ORF33809 - 0.099 12.7 2.4 0.27 11.3 2.4 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 ORF33809 - 0.19 11.8 3.8 0.13 12.3 2.1 1.7 2 0 0 2 2 2 0 Laminin Domain II DUF725 PF05267.12 ORF33809 - 0.58 10.1 11.7 0.041 13.9 3.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF725) DLH PF01738.18 ORF31662 - 4.7e-16 59.0 0.0 8.9e-16 58.1 0.0 1.4 1 1 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF31662 - 0.0014 18.1 0.0 0.0021 17.6 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S11 PF00768.20 ORF31393 - 5.7e-17 62.0 0.0 4.4e-14 52.5 0.0 2.3 2 0 0 2 2 2 2 D-alanyl-D-alanine carboxypeptidase Peptidase_C26 PF07722.13 ORF30951 - 5.6e-21 75.3 0.0 1.3e-20 74.1 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF30951 - 2.3e-11 43.8 0.0 5.6e-11 42.5 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I BAR_3_WASP_bdg PF10456.9 ORF30951 - 0.029 13.8 0.1 0.047 13.2 0.1 1.3 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein Secretin_N_2 PF07655.13 ORF28471 - 1.1 9.9 7.0 5.5 7.6 1.3 3.2 3 0 0 3 3 3 0 Secretin N-terminal domain His_Phos_1 PF00300.22 ORF27762 - 7.3e-07 29.1 0.0 0.0028 17.4 0.0 2.9 2 1 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) V-SNARE PF05008.15 ORF27762 - 0.023 15.0 0.1 0.074 13.4 0.1 1.8 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus fn3 PF00041.21 ORF23592 - 4e-30 104.0 0.0 3.8e-11 43.2 0.1 3.2 3 0 0 3 3 3 3 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 ORF23592 - 1.4e-09 38.4 0.0 0.00054 20.5 0.0 3.3 3 1 0 3 3 3 2 Purple acid Phosphatase, N-terminal domain DUF2369 PF10179.9 ORF23592 - 0.03 14.7 0.0 3.9 7.9 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2369) Y_Y_Y PF07495.13 ORF23592 - 0.089 12.8 0.0 7.3 6.6 0.0 2.9 3 0 0 3 3 3 0 Y_Y_Y domain Voltage_CLC PF00654.20 ORF19138 - 4.3 6.5 12.3 1.3 8.2 8.8 1.8 1 1 1 2 2 2 0 Voltage gated chloride channel Alg6_Alg8 PF03155.15 ORF18335 - 0.0082 15.2 2.8 0.011 14.7 2.8 1.1 1 0 0 1 1 1 1 ALG6, ALG8 glycosyltransferase family DUF2776 PF10951.8 ORF18335 - 0.011 15.0 0.1 0.013 14.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) DUF3290 PF11694.8 ORF18335 - 0.039 13.9 0.7 0.062 13.3 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) E1-E2_ATPase PF00122.20 ORF18335 - 0.046 13.2 0.1 0.077 12.5 0.1 1.3 1 0 0 1 1 1 0 E1-E2 ATPase EbsA PF17255.2 ORF18335 - 0.11 12.9 0.1 0.16 12.3 0.1 1.3 1 0 0 1 1 1 0 EbsA-like protein Peptidase_S21 PF00716.17 ORF18335 - 0.18 11.5 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 Assemblin (Peptidase family S21) Ninjurin PF04923.12 ORF18335 - 0.23 11.4 1.7 0.6 10.1 1.7 1.6 1 1 0 1 1 1 0 Ninjurin Popeye PF04831.13 ORF18335 - 0.27 11.4 1.7 0.54 10.4 1.7 1.4 1 0 0 1 1 1 0 Popeye protein conserved region SNARE_assoc PF09335.11 ORF16931 - 2e-14 54.1 10.2 2.1e-14 54.0 8.6 1.8 2 0 0 2 2 2 1 SNARE associated Golgi protein AI-2E_transport PF01594.16 ORF16931 - 1.5 7.9 17.7 0.13 11.4 4.0 2.6 2 1 1 3 3 3 0 AI-2E family transporter Peptidase_S11 PF00768.20 ORF1514 - 5.7e-17 62.0 0.0 4.4e-14 52.5 0.0 2.3 2 0 0 2 2 2 2 D-alanyl-D-alanine carboxypeptidase DUF4498 PF14926.6 ORF149263 - 1.8e-63 214.1 6.5 2.1e-63 213.9 6.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4498) DUF1878 PF08963.10 ORF149263 - 0.049 14.1 2.5 0.065 13.7 1.2 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF1878) Peptidase_C54 PF03416.19 ORF149113 - 3.9e-50 170.8 0.1 5e-50 170.5 0.1 1.1 1 0 0 1 1 1 1 Peptidase family C54 FCD PF07729.12 ORF143687 - 6.4e-25 88.0 9.5 6.4e-25 88.0 9.5 1.6 2 0 0 2 2 2 1 FCD domain GntR PF00392.21 ORF143687 - 2.9e-14 52.4 0.0 7.2e-14 51.2 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family DUF2673 PF10880.8 ORF143687 - 0.022 14.8 0.6 0.29 11.3 0.4 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF2673) TFIIE_alpha PF02002.17 ORF143687 - 0.074 12.9 0.0 0.22 11.4 0.0 1.7 1 1 0 1 1 1 0 TFIIE alpha subunit Methyltransf_11 PF08241.12 ORF142556 - 1.7e-11 44.6 0.0 2.8e-11 43.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF142556 - 9.3e-07 28.8 0.0 1.4e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF142556 - 1.1e-06 28.6 0.0 1.4e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF142556 - 1.5e-06 28.8 0.0 2.9e-06 27.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF142556 - 3.6e-06 27.6 0.0 5.8e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF142556 - 4.8e-06 26.1 0.0 6.7e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_29 PF03141.16 ORF142556 - 0.00023 19.9 0.0 0.00032 19.4 0.0 1.2 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_8 PF05148.15 ORF142556 - 0.00065 19.6 0.0 0.00094 19.1 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase fn3 PF00041.21 ORF142158 - 4e-30 104.0 0.0 3.8e-11 43.2 0.1 3.2 3 0 0 3 3 3 3 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 ORF142158 - 1.4e-09 38.4 0.0 0.00054 20.5 0.0 3.3 3 1 0 3 3 3 2 Purple acid Phosphatase, N-terminal domain DUF2369 PF10179.9 ORF142158 - 0.03 14.7 0.0 3.9 7.9 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2369) Y_Y_Y PF07495.13 ORF142158 - 0.089 12.8 0.0 7.3 6.6 0.0 2.9 3 0 0 3 3 3 0 Y_Y_Y domain CLIP PF12032.8 ORF141947 - 0.06 13.6 0.8 4.9 7.5 1.0 3.1 2 1 0 2 2 2 0 Regulatory CLIP domain of proteinases Copine PF07002.16 ORF140370 - 7.6e-67 224.9 0.1 9e-67 224.7 0.1 1.0 1 0 0 1 1 1 1 Copine vWA-TerF-like PF10138.9 ORF140370 - 2.8e-07 30.9 0.0 4.1e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 vWA found in TerF C terminus Peptidase_C26 PF07722.13 ORF138095 - 3.2e-21 76.1 0.0 7.5e-21 74.9 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 GATase PF00117.28 ORF138095 - 1.2e-11 44.7 0.0 2.8e-11 43.5 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I BAR_3_WASP_bdg PF10456.9 ORF138095 - 0.023 14.2 0.1 0.047 13.2 0.1 1.5 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein Vps35 PF03635.17 ORF136473 - 1.2e-50 172.9 8.2 1.4e-50 172.7 8.2 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 MOR2-PAG1_C PF14225.6 ORF136473 - 0.0072 16.2 1.7 0.013 15.4 1.4 1.5 2 0 0 2 2 2 1 Cell morphogenesis C-terminal FAS_N PF17828.1 ORF136473 - 0.016 15.2 0.5 0.12 12.4 0.1 2.2 1 1 1 2 2 2 0 N-terminal domain in fatty acid synthase subunit beta CSN4_RPN5_eIF3a PF18420.1 ORF136473 - 0.073 13.2 0.1 0.28 11.4 0.0 2.0 1 1 0 1 1 1 0 CSN4/RPN5/eIF3a helix turn helix domain TruB_C_2 PF16198.5 ORF130847 - 1.9e-21 76.0 0.5 3.6e-21 75.1 0.5 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 ORF130847 - 8.1e-19 67.4 1.2 8.1e-19 67.4 1.2 2.3 2 0 0 2 2 2 1 PUA domain UPF0113 PF03657.13 ORF130847 - 0.0058 16.9 0.0 0.016 15.4 0.0 1.8 1 0 0 1 1 1 1 UPF0113 PUA domain DUF305 PF03713.13 ORF127744 - 7e-13 49.0 0.2 1.4e-12 48.0 0.1 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF305) DUF4789 PF16033.5 ORF126537 - 0.019 15.5 1.1 0.038 14.5 1.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4789) zf-C2H2 PF00096.26 ORF120993 - 1.3e-13 50.6 22.0 2.7e-06 27.5 2.9 4.4 5 0 0 5 5 5 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF120993 - 8.3e-12 45.0 9.4 2.9e-05 24.3 2.0 3.1 2 0 0 2 2 2 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF120993 - 5.1e-06 26.1 4.3 5.1e-06 26.1 4.3 3.2 3 0 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_4 PF13894.6 ORF120993 - 2.6e-05 24.7 25.5 0.0012 19.5 1.7 4.3 5 0 0 5 5 3 3 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF120993 - 0.002 18.4 1.2 0.002 18.4 1.2 3.0 2 1 1 3 3 3 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF120993 - 0.0063 16.2 1.6 0.0096 15.7 0.1 2.1 2 0 0 2 2 2 1 zinc-finger C2H2-type AbiJ_NTD4 PF18863.1 ORF120993 - 0.016 15.7 3.5 0.071 13.6 0.3 2.2 2 0 0 2 2 2 0 AbiJ N-terminal domain 4 Mut7-C PF01927.16 ORF120993 - 0.22 11.6 3.4 0.48 10.5 2.9 1.8 1 1 1 2 2 2 0 Mut7-C RNAse domain zf-C2H2_6 PF13912.6 ORF120993 - 0.67 10.0 16.4 2.2 8.3 3.6 3.9 4 0 0 4 4 4 0 C2H2-type zinc finger zf-BED PF02892.15 ORF120993 - 3.1 7.9 10.1 1.7 8.7 1.7 2.9 2 1 0 2 2 2 0 BED zinc finger Zn-ribbon_8 PF09723.10 ORF120993 - 6.7 6.9 10.6 0.86 9.8 0.2 3.4 4 0 0 4 4 4 0 Zinc ribbon domain zf-met PF12874.7 ORF120993 - 7.6 7.1 22.6 2.4 8.7 1.4 4.5 4 1 0 4 4 4 0 Zinc-finger of C2H2 type ATG16 PF08614.11 ORF120590 - 0.015 15.5 6.0 0.015 15.5 6.0 1.8 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Spc24 PF08286.11 ORF120590 - 0.24 11.7 0.9 7.3 6.9 0.0 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 DUF1295 PF06966.12 ORF120112 - 5.3e-62 209.4 9.7 6.1e-62 209.2 9.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) PEMT PF04191.13 ORF120112 - 1.3e-07 31.9 1.0 1.3e-07 31.9 1.0 2.6 2 2 0 2 2 2 1 Phospholipid methyltransferase Steroid_dh PF02544.16 ORF120112 - 1.4e-05 25.1 7.0 1.4e-05 25.1 7.0 1.7 1 1 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 ORF120112 - 0.00036 20.9 1.9 0.00036 20.9 0.2 2.0 2 0 0 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PIRT PF15099.6 ORF120112 - 0.012 15.2 0.4 0.11 12.1 0.2 2.6 1 1 1 2 2 2 0 Phosphoinositide-interacting protein family DHHC PF01529.20 ORF120112 - 0.28 11.3 2.7 0.31 11.1 0.5 2.0 1 1 1 2 2 2 0 DHHC palmitoyltransferase Pro_isomerase PF00160.21 ORF116598 - 4.2e-44 150.6 0.0 7.3e-44 149.8 0.0 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SKIP_SNW PF02731.15 ORF11234 - 2.7e-12 46.6 7.4 2.7e-12 46.6 7.4 2.4 2 0 0 2 2 2 1 SKIP/SNW domain Atg14 PF10186.9 ORF11234 - 8.8 5.3 16.1 12 4.9 16.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4200 PF13863.6 ORF11102 - 0.017 15.5 5.9 0.038 14.4 5.9 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) HTH_40 PF14493.6 ORF11102 - 0.23 11.9 7.4 1.2 9.6 0.3 3.6 2 2 2 4 4 4 0 Helix-turn-helix domain Laminin_II PF06009.12 ORF11102 - 0.24 11.4 3.8 0.19 11.8 1.9 1.8 2 0 0 2 2 2 0 Laminin Domain II Tropomyosin_1 PF12718.7 ORF11102 - 0.29 11.3 6.6 0.53 10.4 6.6 1.5 1 0 0 1 1 1 0 Tropomyosin like DUF1664 PF07889.12 ORF11102 - 0.87 9.6 9.1 1.1 9.3 4.2 2.6 2 2 0 2 2 2 0 Protein of unknown function (DUF1664) DUF725 PF05267.12 ORF11102 - 0.94 9.5 13.1 0.037 14.0 3.9 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF725) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks72.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks72.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks72.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks72.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- fn3 PF00041.21 ORF109932 - 4e-30 104.0 0.0 3.8e-11 43.2 0.1 3.2 3 0 0 3 3 3 3 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 ORF109932 - 1.4e-09 38.4 0.0 0.00054 20.5 0.0 3.3 3 1 0 3 3 3 2 Purple acid Phosphatase, N-terminal domain DUF2369 PF10179.9 ORF109932 - 0.03 14.7 0.0 3.9 7.9 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2369) Y_Y_Y PF07495.13 ORF109932 - 0.089 12.8 0.0 7.3 6.6 0.0 2.9 3 0 0 3 3 3 0 Y_Y_Y domain Abhydrolase_3 PF07859.13 ORF105129 - 8.7e-41 140.1 0.0 1e-40 139.9 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF105129 - 1.1e-15 57.4 0.0 9.3e-15 54.4 0.0 2.0 1 1 0 1 1 1 1 Steryl acetyl hydrolase Aminotran_3 PF00202.21 ORF10501 - 3.4e-71 240.1 0.0 3.9e-71 239.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Cwf_Cwc_15 PF04889.12 ORF100953 - 4.3 7.0 28.8 3.3 7.4 5.5 2.1 1 1 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein AMP-binding PF00501.28 NODE_25829_length_820_cov_2.238217_g20174_i0reverse_frame_1 - 6.3e-50 170.0 0.0 7.1e-50 169.8 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme Asp_protease_2 PF13650.6 NODE_25829_length_820_cov_2.238217_g20174_i0reverse_frame_1 - 0.1 13.3 0.0 0.27 11.9 0.0 1.7 1 0 0 1 1 1 0 Aspartyl protease zf-C2H2_7 PF15269.6 NODE_25615_length_824_cov_574.738910_g20008_i0reverse_frame_3 - 0.054 13.6 0.0 0.054 13.6 0.0 2.8 3 0 0 3 3 3 0 Zinc-finger Asp PF00026.23 NODE_25610_length_824_cov_926.548796_g6000_i3forward_frame_2 - 4.1e-24 85.6 3.8 5.3e-24 85.2 3.8 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 NODE_25610_length_824_cov_926.548796_g6000_i3forward_frame_2 - 1.3e-06 28.8 0.7 3.4e-06 27.4 0.2 1.8 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal CENP-F_leu_zip PF10473.9 NODE_25605_length_825_cov_3.018987_g20002_i0forward_frame_2 - 0.012 15.6 8.8 0.04 14.0 8.9 1.8 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ERM PF00769.19 NODE_25605_length_825_cov_3.018987_g20002_i0forward_frame_2 - 0.014 15.2 1.0 0.014 15.2 1.0 1.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family DUF745 PF05335.13 NODE_25605_length_825_cov_3.018987_g20002_i0forward_frame_2 - 0.19 11.5 3.3 0.31 10.7 3.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF745) DUF724 PF05266.14 NODE_25605_length_825_cov_3.018987_g20002_i0forward_frame_2 - 0.52 10.1 8.0 0.087 12.6 4.3 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF724) Syntaxin_2 PF14523.6 NODE_25605_length_825_cov_3.018987_g20002_i0forward_frame_2 - 5.7 7.4 9.8 0.62 10.5 5.0 1.8 2 0 0 2 2 2 0 Syntaxin-like protein WES_acyltransf PF03007.16 ORF99302 - 5.1e-05 23.2 0.0 7.6e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF99302 - 0.00049 18.8 0.3 0.00067 18.3 0.3 1.3 1 0 0 1 1 1 1 Alcohol acetyltransferase KleE PF17394.2 ORF98347 - 0.092 13.0 2.9 1.3 9.2 1.0 2.3 2 0 0 2 2 2 0 Uncharacterized KleE stable inheritance protein PMSR PF01625.21 ORF96915 - 3e-61 206.1 2.6 3.7e-61 205.8 2.6 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase zf-B_box PF00643.24 ORF95731 - 0.17 12.1 11.7 0.39 10.9 11.7 1.6 1 0 0 1 1 1 0 B-box zinc finger DUF2315 PF10231.9 ORF95731 - 3 8.0 11.0 0.18 11.9 0.4 2.3 1 1 0 2 2 2 0 Apoptogenic protein 1 GntR PF00392.21 ORF95296 - 2.8e-23 81.3 1.4 4.7e-23 80.6 0.3 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 ORF95296 - 1.9e-20 73.6 7.7 2.8e-20 73.0 7.7 1.3 1 0 0 1 1 1 1 FCD domain Rrf2 PF02082.20 ORF95296 - 4.7e-05 23.7 0.1 0.00014 22.1 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulator HTH_Crp_2 PF13545.6 ORF95296 - 0.00039 20.3 0.3 0.0013 18.6 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain TrmB PF01978.19 ORF95296 - 0.0016 18.2 0.1 0.0045 16.9 0.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB LexA_DNA_bind PF01726.16 ORF95296 - 0.016 15.0 0.1 0.033 14.0 0.1 1.6 1 0 0 1 1 1 0 LexA DNA binding domain HTH_CodY PF08222.11 ORF95296 - 0.094 12.3 0.1 0.2 11.2 0.1 1.4 1 0 0 1 1 1 0 CodY helix-turn-helix domain MarR_2 PF12802.7 ORF95296 - 0.12 12.3 0.0 0.31 11.0 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 ORF95296 - 0.2 11.6 0.7 0.39 10.7 0.1 1.8 2 0 0 2 2 2 0 HTH domain Aconitase PF00330.20 ORF89626 - 1.7e-26 93.3 0.7 3e-24 85.9 0.7 2.3 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) Ketoacyl-synt_C PF02801.22 ORF89626 - 0.049 13.7 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Beta-ketoacyl synthase, C-terminal domain BPD_transp_1 PF00528.22 ORF86095 - 0.0019 18.0 1.2 0.0025 17.6 1.2 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Abhydrolase_6 PF12697.7 ORF83029 - 1.4e-06 29.0 0.1 1.9e-06 28.7 0.1 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 ORF83029 - 0.03 14.4 0.0 0.055 13.6 0.0 1.6 1 1 0 1 1 1 0 Thioesterase domain Hydrolase_4 PF12146.8 ORF83029 - 0.042 13.1 0.0 0.074 12.3 0.0 1.4 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Ser_hydrolase PF06821.13 ORF83029 - 0.13 12.1 0.0 0.28 11.0 0.0 1.5 2 0 0 2 2 2 0 Serine hydrolase Abhydrolase_1 PF00561.20 ORF83029 - 0.18 11.4 0.0 0.38 10.4 0.0 1.5 2 0 0 2 2 2 0 alpha/beta hydrolase fold MLTR_LBD PF17765.1 ORF78581 - 0.0054 16.9 1.1 0.0054 16.9 1.1 1.8 1 1 1 2 2 2 1 MmyB-like transcription regulator ligand binding domain zf-MIZ PF02891.20 ORF75900 - 8.3e-17 60.7 2.5 1.9e-16 59.6 2.5 1.6 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger zf-Nse PF11789.8 ORF75900 - 0.00014 21.6 2.2 0.00031 20.5 0.9 2.1 2 0 0 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_2 PF13923.6 ORF75900 - 0.54 10.1 4.6 4.1 7.3 0.5 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF908 PF06012.12 ORF68568 - 0.31 10.4 5.2 0.56 9.6 5.2 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) Tim54 PF11711.8 ORF68568 - 1.2 7.9 8.4 1.8 7.2 8.4 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Ion_trans PF00520.31 ORF66278 - 0.054 12.7 0.2 0.072 12.3 0.2 1.2 1 0 0 1 1 1 0 Ion transport protein EF-hand_6 PF13405.6 ORF66278 - 0.067 13.2 0.1 1.6 8.9 0.0 2.7 2 0 0 2 2 2 0 EF-hand domain EF-hand_8 PF13833.6 ORF66278 - 0.07 13.0 1.2 0.3 11.0 0.2 2.3 2 0 0 2 2 2 0 EF-hand domain pair Glyco_hydro_cc PF11790.8 ORF65670 - 2.8e-52 177.7 0.1 3.4e-52 177.4 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase catalytic core MOZART1 PF12554.8 ORF56675 - 0.19 11.5 0.6 0.71 9.7 0.1 2.0 2 0 0 2 2 2 0 Mitotic-spindle organizing gamma-tubulin ring associated ATP_bind_1 PF03029.17 ORF56664 - 1.2e-77 261.0 1.2 1.4e-77 260.8 1.2 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_18 PF13238.6 ORF56664 - 0.0078 16.8 0.1 0.025 15.1 0.0 2.0 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 ORF56664 - 0.04 14.4 0.6 0.53 10.7 0.1 2.6 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 ORF56664 - 0.069 12.9 0.0 0.099 12.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF56664 - 0.16 12.2 0.1 0.92 9.8 0.1 2.1 1 1 1 2 2 2 0 AAA domain GPAT_N PF14829.6 ORF56100 - 0.077 13.0 1.2 0.14 12.1 0.1 1.9 2 0 0 2 2 2 0 Glycerol-3-phosphate acyltransferase N-terminal Y2_Tnp PF04986.13 ORF56100 - 0.11 12.5 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Putative transposase PIEZO PF15917.5 ORF56100 - 3.9 6.9 5.5 1.4 8.3 2.9 1.5 1 1 0 1 1 1 0 Piezo PFU PF09070.11 ORF53097 - 0.00012 22.3 0.9 0.00028 21.1 0.9 1.6 1 0 0 1 1 1 1 PFU (PLAA family ubiquitin binding) DUF4802 PF16060.5 ORF53097 - 0.095 12.9 2.1 0.33 11.1 2.1 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4802) dsRBD2 PF17842.1 ORF53097 - 9.9 6.4 7.8 0.97 9.6 1.6 2.3 1 1 1 2 2 2 0 Double-stranded RNA binding domain 2 Moulting_cycle PF04870.16 ORF52572 - 0.0075 15.6 0.6 0.19 11.0 0.1 2.3 2 1 0 2 2 2 1 Moulting cycle DUF2369 PF10179.9 ORF52572 - 0.0078 16.6 0.0 0.053 13.9 0.0 2.4 2 1 0 2 2 2 1 Uncharacterised conserved protein (DUF2369) PNK3P PF08645.11 ORF52572 - 0.097 12.4 0.2 2.4 7.8 0.1 2.6 2 1 1 3 3 3 0 Polynucleotide kinase 3 phosphatase Helicase_C PF00271.31 ORF5231 - 8e-22 77.7 0.0 1.4e-21 76.9 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain IBR PF01485.21 ORF4496 - 0.022 15.0 2.5 0.022 15.0 2.5 4.4 3 1 1 4 4 4 0 IBR domain, a half RING-finger domain DUF3742 PF12553.8 ORF44849 - 0.03 14.4 0.6 0.068 13.3 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) Ca_chan_IQ PF08763.11 ORF44849 - 0.15 12.3 0.0 0.48 10.7 0.0 1.8 2 0 0 2 2 2 0 Voltage gated calcium channel IQ domain DUF3139 PF11337.8 ORF44258 - 0.11 13.1 0.8 0.11 13.1 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) PS_Dcarbxylase PF02666.15 ORF39325 - 8.2e-60 201.8 0.0 9.6e-60 201.6 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase THDPS_N_2 PF14805.6 ORF31629 - 4e-26 91.0 0.9 6.4e-26 90.4 0.9 1.3 1 0 0 1 1 1 1 Tetrahydrodipicolinate N-succinyltransferase N-terminal Hexapep_2 PF14602.6 ORF31629 - 5.7e-13 48.4 1.5 5.7e-13 48.4 1.5 2.7 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.24 ORF31629 - 5.9e-12 44.8 9.4 7.5e-07 28.6 0.9 3.3 2 1 1 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Cas3_C PF18395.1 ORF31629 - 0.14 12.7 0.0 0.37 11.3 0.0 1.7 2 0 0 2 2 2 0 Cas3 C-terminal domain FtsJ PF01728.19 ORF31070 - 3.1e-37 128.4 0.0 4.2e-37 128.0 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 ORF31070 - 0.00036 20.4 0.0 0.0013 18.6 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF31070 - 0.00048 20.8 0.0 0.0009 19.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF31070 - 0.00062 19.6 0.0 0.00072 19.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF31070 - 0.027 14.2 0.0 0.052 13.3 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 ORF31070 - 0.032 13.6 0.0 0.12 11.7 0.0 1.7 1 1 0 2 2 2 0 ubiE/COQ5 methyltransferase family CMAS PF02353.20 ORF31070 - 0.077 12.3 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Complex1_LYR PF05347.15 ORF31070 - 0.35 10.9 1.6 6.1 7.0 0.2 2.4 2 0 0 2 2 2 0 Complex 1 protein (LYR family) BRX PF08381.11 ORF2940 - 0.16 11.3 1.0 0.67 9.4 0.2 2.2 2 0 0 2 2 2 0 Transcription factor regulating root and shoot growth via Pin3 WES_acyltransf PF03007.16 ORF27678 - 5.1e-05 23.2 0.0 7.6e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain AATase PF07247.12 ORF27678 - 0.00049 18.8 0.3 0.00067 18.3 0.3 1.3 1 0 0 1 1 1 1 Alcohol acetyltransferase Peptidase_C2 PF00648.21 ORF23498 - 4.8e-32 111.2 0.3 6.3e-32 110.8 0.3 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF23498 - 1.1e-13 51.7 0.0 2.3e-13 50.6 0.0 1.5 1 1 0 1 1 1 1 Calpain large subunit, domain III Band_7 PF01145.25 ORF23342 - 1.3e-09 38.4 1.3 1.3e-09 38.4 1.3 1.8 2 0 0 2 2 2 1 SPFH domain / Band 7 family DUF2172 PF09940.9 ORF23342 - 0.13 12.7 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2172) TIC20 PF16166.5 ORF21 - 0.0065 16.3 3.8 0.019 14.8 3.8 1.8 1 1 0 1 1 1 1 Chloroplast import apparatus Tic20-like zf_PR_Knuckle PF18445.1 ORF21 - 0.11 12.3 1.4 0.29 11.0 1.4 1.6 1 0 0 1 1 1 0 PR zinc knuckle motif cNMP_binding PF00027.29 ORF152708 - 0.005 16.9 0.0 0.0089 16.1 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain GPAT_N PF14829.6 ORF150051 - 0.077 13.0 1.2 0.14 12.1 0.1 1.9 2 0 0 2 2 2 0 Glycerol-3-phosphate acyltransferase N-terminal Y2_Tnp PF04986.13 ORF150051 - 0.11 12.5 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 Putative transposase PIEZO PF15917.5 ORF150051 - 3.9 6.9 5.5 1.4 8.3 2.9 1.5 1 1 0 1 1 1 0 Piezo FecCD PF01032.18 ORF145038 - 3.4e-76 256.2 33.2 3.8e-76 256.1 33.2 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 ORF145038 - 0.0012 18.4 20.5 0.0024 17.4 20.5 1.5 1 1 0 1 1 1 1 ABC 3 transport family OsmC PF02566.19 ORF145038 - 1.1 9.7 3.9 6.7 7.3 0.1 2.7 2 0 0 2 2 2 0 OsmC-like protein DUF4574 PF15141.6 ORF145038 - 4.5 7.3 6.2 14 5.7 1.0 2.9 2 1 1 3 3 3 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Shisa PF13908.6 ORF141730 - 0.047 13.9 0.9 0.047 13.9 0.9 2.4 3 0 0 3 3 3 0 Wnt and FGF inhibitory regulator GPDPase_memb PF10110.9 ORF141730 - 0.19 10.5 13.3 0.065 12.0 4.0 2.1 1 1 1 2 2 2 0 Membrane domain of glycerophosphoryl diester phosphodiesterase DUF3975 PF13126.6 ORF141730 - 0.22 12.0 0.1 0.22 12.0 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3975) DUF5075 PF16825.5 ORF133925 - 0.14 11.9 1.0 0.43 10.3 0.3 2.0 2 0 0 2 2 2 0 IGP family C-type lectin domain CBS PF00571.28 ORF133655 - 0.00064 20.1 0.1 0.0022 18.4 0.1 1.9 2 0 0 2 2 2 1 CBS domain DNA_pol3_chi PF04364.13 ORF128939 - 0.092 12.9 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase III chi subunit, HolC GLTP PF08718.11 ORF126904 - 0.22 11.8 2.0 0.25 11.6 0.2 1.9 2 1 0 2 2 2 0 Glycolipid transfer protein (GLTP) Spore_III_AE PF09546.10 ORF126904 - 0.29 10.3 0.5 0.62 9.2 0.3 1.7 1 1 1 2 2 2 0 Stage III sporulation protein AE (spore_III_AE) EcsC PF12787.7 ORF126904 - 7.6 6.1 7.5 14 5.3 1.2 3.4 1 1 1 2 2 2 0 EcsC protein family PhyH PF05721.13 ORF124846 - 1.6e-06 28.5 0.0 2.6e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Sel1 PF08238.12 ORF124846 - 0.099 13.4 0.2 13 6.6 0.0 2.7 2 0 0 2 2 2 0 Sel1 repeat DUF4022 PF13214.6 ORF123854 - 0.22 11.8 2.1 0.63 10.4 2.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF4022) DUF4093 PF13331.6 ORF11896 - 0.05 14.0 0.0 0.097 13.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4093) TatD_DNase PF01026.21 ORF116113 - 5.6e-77 258.6 0.0 6.4e-77 258.4 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Pkinase PF00069.25 ORF112844 - 7.1e-55 186.2 0.0 8e-55 186.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF112844 - 1.5e-27 96.6 0.0 1.8e-27 96.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF112844 - 0.00017 21.0 0.0 0.00019 20.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF112844 - 0.00025 19.9 0.0 0.00029 19.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF112844 - 0.013 14.6 0.0 0.019 14.0 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 APH PF01636.23 ORF112844 - 0.025 14.5 0.0 0.032 14.2 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF112844 - 0.12 11.8 0.3 0.28 10.5 0.3 1.7 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family TPR_1 PF00515.28 ORF110790 - 3.9e-10 39.1 9.0 0.00084 19.1 1.3 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 ORF110790 - 8.5e-09 35.6 3.0 0.0011 19.3 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF110790 - 1.8e-05 24.4 1.9 0.3 11.0 0.0 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF110790 - 0.00053 19.9 4.4 5.7 7.3 0.2 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF110790 - 0.001 19.1 9.1 0.25 11.6 0.7 4.5 4 0 0 4 4 4 2 Tetratricopeptide repeat DUF5113 PF17140.4 ORF110790 - 0.0058 16.5 5.3 0.6 9.9 0.1 3.2 2 1 1 3 3 3 2 Domain of unknown function (DUF5113) DDRGK PF09756.9 ORF107282 - 0.77 9.3 9.7 1.2 8.7 9.7 1.3 1 0 0 1 1 1 0 DDRGK domain DBD_HTH PF18430.1 ORF107282 - 9 6.2 8.0 0.86 9.4 1.6 2.6 2 1 1 3 3 3 0 Putative DNA-binding domain MMR_HSR1_Xtn PF16897.5 ORF1061 - 0.027 14.5 1.9 0.071 13.1 0.2 2.4 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain CdiA_C PF18451.1 ORF102625 - 0.051 13.8 1.6 0.12 12.6 0.4 2.2 2 0 0 2 2 2 0 Contact-dependent growth inhibition CdiA C-terminal domain FAM163 PF15069.6 ORF102625 - 5.3 7.5 9.2 1.6 9.1 1.8 2.2 1 1 1 2 2 2 0 FAM163 family Snf7 PF03357.21 ORF100621 - 2.8e-07 30.3 6.7 2.5e-06 27.2 8.1 1.7 2 0 0 2 2 2 1 Snf7 Pex14_N PF04695.13 ORF100621 - 0.39 11.4 8.7 0.62 10.7 8.7 1.3 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Metallophos PF00149.28 NODE_25891_length_818_cov_169.291188_g20219_i0reverse_frame_1 - 2.5e-12 47.7 0.0 3.5e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Myco_arth_vir_N PF09610.10 NODE_25878_length_818_cov_444.093231_g20209_i0reverse_frame_1 - 0.92 9.7 3.6 2.7 8.1 3.6 1.8 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) PRCC PF10253.9 NODE_25878_length_818_cov_444.093231_g20209_i0forward_frame_1 - 0.037 14.8 0.8 0.054 14.3 0.8 1.1 1 0 0 1 1 1 0 Mitotic checkpoint regulator, MAD2B-interacting CAP_N PF01213.19 NODE_25878_length_818_cov_444.093231_g20209_i0forward_frame_1 - 0.1 12.1 3.3 0.15 11.5 3.3 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Phasin_2 PF09361.10 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.043 14.1 3.1 0.11 12.8 0.1 2.7 3 1 0 3 3 3 0 Phasin protein DUF1804 PF08822.11 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.043 13.8 5.5 1.7 8.6 0.2 3.3 1 1 2 3 3 3 0 Protein of unknown function (DUF1804) MLD PF11647.8 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.071 13.4 3.8 0.98 9.8 0.7 2.8 2 0 0 2 2 2 0 Membrane Localization Domain Nup54 PF13874.6 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.072 13.2 1.0 0.072 13.2 1.0 2.3 2 1 0 3 3 3 0 Nucleoporin complex subunit 54 SRP_SPB PF02978.19 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.078 13.6 1.5 0.2 12.3 1.1 2.0 1 1 0 1 1 1 0 Signal peptide binding domain DUF1043 PF06295.12 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.13 12.3 8.6 0.12 12.3 2.3 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) AcylCoA_dehyd_C PF12186.8 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 0.46 10.6 8.4 0.81 9.8 2.8 3.8 1 1 1 3 3 3 0 Acyl-CoA dehydrogenase C terminal Activator-TraM PF11657.8 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 1.1 9.1 6.5 0.51 10.2 0.4 2.4 2 1 1 3 3 3 0 Transcriptional activator TraM YtxH PF12732.7 NODE_25820_length_820_cov_82.745223_g20167_i0reverse_frame_3 - 2.5 8.7 5.2 81 3.9 5.2 3.2 1 1 0 1 1 1 0 YtxH-like protein DUF5599 PF18141.1 NODE_25809_length_820_cov_157.631847_g20157_i0reverse_frame_2 - 0.062 13.5 1.4 0.74 10.1 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5599) YL1 PF05764.13 NODE_25809_length_820_cov_157.631847_g20157_i0reverse_frame_2 - 4.2 7.4 19.3 0.1 12.7 12.3 1.7 2 0 0 2 2 2 0 YL1 nuclear protein DUF4205 PF13898.6 NODE_25794_length_820_cov_557.170701_g19899_i1reverse_frame_3 - 3e-63 213.9 0.0 3.7e-63 213.6 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4205) LRR_6 PF13516.6 NODE_25717_length_822_cov_330.088945_g20082_i0reverse_frame_3 - 0.00071 19.4 5.3 20 5.6 0.1 5.8 5 0 0 5 5 5 1 Leucine Rich repeat LRR_1 PF00560.33 NODE_25717_length_822_cov_330.088945_g20082_i0reverse_frame_3 - 0.11 13.1 1.1 6.1 7.8 0.2 3.1 2 0 0 2 2 2 0 Leucine Rich Repeat Acetyltransf_6 PF13480.7 NODE_25717_length_822_cov_330.088945_g20082_i0reverse_frame_3 - 0.81 9.8 7.0 15 5.7 0.0 2.7 2 1 1 3 3 3 0 Acetyltransferase (GNAT) domain LRR_4 PF12799.7 NODE_25717_length_822_cov_330.088945_g20082_i0reverse_frame_3 - 4 8.0 6.6 4.8 7.7 1.5 3.2 3 1 0 3 3 3 0 Leucine Rich repeats (2 copies) Pkinase PF00069.25 ORF96416 - 3.8e-55 187.1 0.0 4.8e-55 186.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF96416 - 5.4e-28 98.0 0.0 6.9e-28 97.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF96416 - 9.1e-06 24.8 0.3 1.5e-05 24.1 0.3 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF96416 - 3.6e-05 23.2 0.0 4.7e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF96416 - 0.051 12.9 0.3 0.11 11.9 0.2 1.6 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF96416 - 0.22 11.4 0.3 0.34 10.8 0.3 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DHHC PF01529.20 ORF91085 - 5.3e-09 36.3 12.2 8.4e-09 35.6 12.2 1.3 1 0 0 1 1 1 1 DHHC palmitoyltransferase Aminotran_1_2 PF00155.21 ORF80599 - 1e-25 90.7 0.0 1.3e-25 90.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 ORF80599 - 0.00033 20.1 0.0 0.00054 19.3 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Glyco_hydro_20 PF00728.22 ORF80599 - 0.022 14.1 0.0 0.034 13.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 20, catalytic domain Cys_Met_Meta_PP PF01053.20 ORF80599 - 0.14 10.7 0.0 0.16 10.5 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme E1-E2_ATPase PF00122.20 ORF80496 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF80496 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus E1-E2_ATPase PF00122.20 ORF77315 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF77315 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus E1-E2_ATPase PF00122.20 ORF76571 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF76571 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus E1-E2_ATPase PF00122.20 ORF76394 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF76394 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Myb_DNA-binding PF00249.31 ORF74813 - 3.9e-10 39.7 0.6 6.9e-10 39.0 0.6 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF74813 - 0.021 14.7 2.2 0.054 13.4 0.2 2.5 2 0 0 2 2 2 0 Myb DNA-binding like SEEEED PF14797.6 ORF74813 - 0.97 9.6 22.9 0.16 12.2 18.6 1.8 2 0 0 2 2 2 0 Serine-rich region of AP3B1, clathrin-adaptor complex PEX11 PF05648.14 ORF74298 - 3.9e-27 95.2 1.1 1.1e-18 67.6 0.5 2.0 1 1 1 2 2 2 2 Peroxisomal biogenesis factor 11 (PEX11) Wbp11 PF09429.10 ORF74298 - 0.094 13.1 4.9 0.53 10.7 1.3 2.4 2 0 0 2 2 2 0 WW domain binding protein 11 Cullin_binding PF03556.15 ORF7416 - 4.9e-24 85.1 1.3 4.9e-24 85.1 1.3 1.7 2 0 0 2 2 2 1 Cullin binding UBA_4 PF14555.6 ORF7416 - 7.4e-06 25.7 0.0 2.1e-05 24.3 0.0 1.8 1 0 0 1 1 1 1 UBA-like domain Asp PF00026.23 ORF67571 - 4.5e-24 85.5 3.9 5.7e-24 85.1 3.9 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF67571 - 1.3e-06 28.8 0.7 3.3e-06 27.4 0.2 1.8 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal Albumin_I_a PF16720.5 ORF65279 - 0.11 12.4 1.4 0.22 11.4 1.4 1.5 1 0 0 1 1 1 0 Albumin I chain a CN_hydrolase PF00795.22 ORF64697 - 3.2e-24 85.7 0.1 1.2e-23 83.8 0.1 1.7 1 1 0 1 1 1 1 Carbon-nitrogen hydrolase CDC45 PF02724.14 ORF63036 - 1.9e-09 36.4 17.8 2.5e-09 36.0 17.8 1.1 1 0 0 1 1 1 1 CDC45-like protein CobT PF06213.12 ORF63036 - 0.0016 17.9 9.3 0.0016 17.9 9.3 1.6 2 0 0 2 2 2 1 Cobalamin biosynthesis protein CobT CPSF100_C PF13299.6 ORF63036 - 0.23 11.6 8.7 0.093 12.9 5.1 1.9 2 0 0 2 2 2 0 Cleavage and polyadenylation factor 2 C-terminal RNA_pol_Rpc4 PF05132.14 ORF63036 - 0.24 11.8 10.2 0.019 15.4 4.9 1.9 2 0 0 2 2 2 0 RNA polymerase III RPC4 Sporozoite_P67 PF05642.11 ORF63036 - 1.1 7.2 10.6 1.4 6.9 10.6 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DNA_pol_phi PF04931.13 ORF63036 - 3.2 5.8 17.5 4.1 5.4 17.5 1.1 1 0 0 1 1 1 0 DNA polymerase phi Vfa1 PF08432.10 ORF63036 - 6.7 7.0 21.1 0.84 9.9 15.6 2.1 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 TAtT PF16811.5 ORF57594 - 0.028 13.7 0.1 0.042 13.2 0.1 1.2 1 0 0 1 1 1 0 TRAP transporter T-component DnaJ PF00226.31 ORF57296 - 3e-21 75.3 0.0 5.5e-21 74.5 0.0 1.5 1 0 0 1 1 1 1 DnaJ domain TPR_1 PF00515.28 ORF57296 - 4.2e-09 35.8 0.8 3.4e-06 26.6 0.0 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF57296 - 5.6e-08 32.3 5.0 0.00024 21.0 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF57296 - 3.7e-05 23.8 0.3 3.7e-05 23.8 0.3 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF57296 - 0.0002 21.3 0.3 0.0015 18.6 0.0 2.7 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF57296 - 0.0014 19.2 1.8 0.38 11.4 2.7 3.2 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF57296 - 0.0027 17.9 7.4 1.9 8.9 0.0 3.6 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF57296 - 0.12 12.1 0.3 6.2 6.6 0.0 3.0 2 1 1 3 3 3 0 TPR repeat ssDNA_DBD PF18333.1 ORF57296 - 0.13 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Non-canonical single-stranded DNA-binding domain TPR_7 PF13176.6 ORF57296 - 0.13 12.3 0.3 6.4 7.0 0.0 3.0 3 1 0 3 3 3 0 Tetratricopeptide repeat DUF3856 PF12968.7 ORF57296 - 0.19 11.8 3.3 0.22 11.6 1.9 1.9 2 1 0 2 2 2 0 Domain of Unknown Function (DUF3856) TPR_19 PF14559.6 ORF57296 - 0.36 11.4 7.7 4.8 7.8 3.4 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF57296 - 1.3 10.1 10.8 8.2 7.5 0.0 3.5 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF57296 - 5.4 7.9 7.2 15 6.5 0.0 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat zf-TRAF PF02176.18 ORF53024 - 9.9e-08 32.6 29.8 8.1e-05 23.2 7.2 5.2 1 1 5 6 6 6 5 TRAF-type zinc finger zf_C2HC_14 PF18574.1 ORF53024 - 0.0049 16.6 0.6 0.0049 16.6 0.6 4.4 5 0 0 5 5 5 1 C2HC Zing finger domain ERGIC_N PF13850.6 ORF49812 - 0.058 13.8 0.1 0.15 12.4 0.1 1.7 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DinI PF06183.13 ORF49812 - 0.14 12.5 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 DinI-like family Ion_trans PF00520.31 ORF47858 - 7.5e-13 48.3 1.5 8.7e-13 48.1 1.5 1.1 1 0 0 1 1 1 1 Ion transport protein Phage_holin_3_5 PF16085.5 ORF47858 - 0.029 14.5 1.5 0.046 13.9 0.4 1.9 1 1 0 2 2 2 0 Bacteriophage holin Hol, superfamily III FMO-like PF00743.19 ORF39090 - 1.3e-15 56.8 0.0 9.1e-14 50.8 0.0 2.1 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 ORF39090 - 6.4e-05 22.4 0.0 0.0001 21.7 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 ORF39090 - 0.075 12.2 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Ribosomal_L23eN PF03939.13 ORF37873 - 0.52 10.6 4.0 0.36 11.1 1.5 2.1 2 0 0 2 2 2 0 Ribosomal protein L23, N-terminal domain DUF3236 PF11576.8 ORF37873 - 0.71 9.6 5.8 0.22 11.2 0.3 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3236) RRM_1 PF00076.22 ORF34724 - 2.3e-10 40.1 0.0 9.2e-10 38.2 0.0 1.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF34724 - 0.077 13.0 0.0 0.24 11.5 0.0 1.8 1 0 0 1 1 1 0 RNA binding motif Cast PF10174.9 ORF34724 - 0.17 10.1 0.0 0.22 9.7 0.0 1.1 1 0 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone DHR10 PF18595.1 ORF31678 - 0.0044 17.1 2.9 0.011 15.8 2.9 1.7 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain FlaC_arch PF05377.11 ORF31678 - 0.0066 16.8 3.9 0.012 16.0 1.8 2.3 2 0 0 2 2 2 1 Flagella accessory protein C (FlaC) GIT_CC PF16559.5 ORF31678 - 0.0099 15.7 4.7 0.38 10.6 3.7 2.3 2 0 0 2 2 2 1 GIT coiled-coil Rho guanine nucleotide exchange factor DUF848 PF05852.11 ORF31678 - 0.025 14.7 7.4 0.34 11.0 0.7 2.5 2 1 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) DUF3450 PF11932.8 ORF31678 - 0.03 13.6 2.9 0.063 12.6 2.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ZapB PF06005.12 ORF31678 - 0.039 14.4 5.5 0.039 14.4 5.5 2.3 2 1 0 2 2 2 0 Cell division protein ZapB Lipoprotein_7 PF01540.16 ORF31678 - 0.046 13.0 5.9 0.28 10.4 0.6 2.1 2 0 0 2 2 2 0 Adhesin lipoprotein Utp11 PF03998.13 ORF31678 - 0.057 13.3 2.6 0.064 13.2 2.6 1.2 1 0 0 1 1 1 0 Utp11 protein SlyX PF04102.12 ORF31678 - 0.099 13.3 5.8 0.069 13.8 3.5 1.9 2 0 0 2 2 2 0 SlyX FPP PF05911.11 ORF31678 - 0.1 10.7 4.3 0.034 12.4 0.9 1.7 2 0 0 2 2 2 0 Filament-like plant protein, long coiled-coil BLOC1_2 PF10046.9 ORF31678 - 0.15 12.4 4.6 0.41 11.0 2.6 2.4 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ISG65-75 PF11727.8 ORF31678 - 0.16 11.2 1.2 0.31 10.2 1.2 1.4 1 0 0 1 1 1 0 Invariant surface glycoprotein Cor1 PF04803.12 ORF31678 - 0.2 11.9 15.8 0.2 11.9 4.4 2.3 2 0 0 2 2 2 0 Cor1/Xlr/Xmr conserved region NYD-SP28_assoc PF14775.6 ORF31678 - 0.2 11.8 13.9 0.084 13.0 5.7 3.5 2 1 1 3 3 3 0 Sperm tail C-terminal domain NPV_P10 PF05531.12 ORF31678 - 0.25 11.8 2.4 0.37 11.3 1.2 1.8 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein TolA_bind_tri PF16331.5 ORF31678 - 0.36 10.9 6.5 0.47 10.6 5.5 1.7 2 0 0 2 2 1 0 TolA binding protein trimerisation bZIP_2 PF07716.15 ORF31678 - 0.49 10.5 5.2 0.81 9.8 3.2 2.3 2 0 0 2 2 2 0 Basic region leucine zipper DUF5082 PF16888.5 ORF31678 - 0.52 10.6 7.7 0.073 13.3 2.6 2.1 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) APG6_N PF17675.1 ORF31678 - 1.1 9.8 10.4 1 9.9 5.2 2.2 2 0 0 2 2 2 0 Apg6 coiled-coil region Osmo_CC PF08946.10 ORF31678 - 1.6 9.0 8.2 1 9.7 0.9 2.7 1 1 1 2 2 2 0 Osmosensory transporter coiled coil E2F_CC-MB PF16421.5 ORF31678 - 2.9 8.3 7.7 0.5 10.8 1.0 2.6 3 0 0 3 3 2 0 E2F transcription factor CC-MB domain DUF16 PF01519.16 ORF31678 - 5.3 7.6 12.6 1.2 9.6 3.4 2.7 2 1 1 3 3 3 0 Protein of unknown function DUF16 TMF_DNA_bd PF12329.8 ORF31678 - 9.9 6.2 14.5 2 8.4 4.6 3.0 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding KASH_CCD PF14662.6 ORF29641 - 0.0023 17.8 16.8 0.0047 16.8 16.7 1.6 1 1 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH UVR PF02151.19 ORF29641 - 0.022 14.5 3.7 0.028 14.2 0.1 2.8 2 0 0 2 2 2 0 UvrB/uvrC motif DUF979 PF06166.12 ORF29641 - 0.29 10.3 0.0 0.43 9.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF979) DUF4047 PF13256.6 ORF29641 - 0.5 10.6 5.8 0.34 11.1 3.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4047) BUD22 PF09073.10 ORF29641 - 0.57 9.5 36.5 0.94 8.7 36.5 1.3 1 0 0 1 1 1 0 BUD22 DUF3450 PF11932.8 ORF29641 - 2.4 7.4 19.7 0.13 11.5 12.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) ZapB PF06005.12 ORF29641 - 7.9 7.0 23.5 0.23 11.9 14.2 2.8 2 1 0 2 2 2 0 Cell division protein ZapB Ly49 PF08391.10 ORF29522 - 0.04 14.3 0.6 0.75 10.2 0.1 2.9 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region Syndecan PF01034.20 ORF29522 - 1 9.4 10.8 2.3 8.2 0.9 2.7 1 1 1 2 2 2 0 Syndecan domain DUF3810 PF12725.7 ORF29522 - 1.8 7.8 10.3 1.4 8.2 2.1 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3810) Oxidored_q4 PF00507.19 ORF29522 - 1.9 8.7 9.1 1.1 9.4 6.3 2.1 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Nuc_sug_transp PF04142.15 ORF27588 - 3.1e-25 89.0 5.7 5.3e-25 88.2 5.7 1.3 1 1 0 1 1 1 1 Nucleotide-sugar transporter UAA PF08449.11 ORF27588 - 1.4e-06 27.8 0.6 1.4e-06 27.8 0.6 1.5 2 0 0 2 2 2 1 UAA transporter family EamA PF00892.20 ORF27588 - 1.9e-05 24.9 24.4 0.0015 18.7 9.8 2.1 2 0 0 2 2 2 2 EamA-like transporter family E1-E2_ATPase PF00122.20 ORF18107 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF18107 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus UAA PF08449.11 ORF17190 - 3e-48 164.6 10.5 3.4e-48 164.4 10.5 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 ORF17190 - 1.8e-05 24.9 15.2 0.0016 18.7 7.6 2.2 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 ORF17190 - 0.00098 18.5 0.9 0.00098 18.5 0.9 1.5 2 0 0 2 2 2 1 Triose-phosphate Transporter family DUF2085 PF09858.9 ORF17190 - 0.16 12.4 1.4 0.37 11.3 0.0 2.2 2 1 0 2 2 2 0 Predicted membrane protein (DUF2085) PseudoU_synth_2 PF00849.22 ORF152596 - 1.4e-28 100.0 0.0 2.3e-28 99.3 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase E1-E2_ATPase PF00122.20 ORF150357 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF150357 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Clathrin_H_link PF13838.6 ORF149558 - 0.082 12.8 0.1 1.8 8.5 0.0 2.5 2 0 0 2 2 2 0 Clathrin-H-link E1-E2_ATPase PF00122.20 ORF147148 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF147148 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus GPP34 PF05719.11 ORF146683 - 0.021 14.9 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 Golgi phosphoprotein 3 (GPP34) LtuB PF17455.2 ORF144310 - 0.25 12.0 0.8 58 4.4 0.1 3.0 3 0 0 3 3 3 0 Late transcription unit B Myosin_tail_1 PF01576.19 ORF144310 - 0.27 9.0 4.9 0.32 8.7 4.9 1.1 1 0 0 1 1 1 0 Myosin tail OEP PF02321.18 ORF144310 - 0.93 9.3 7.9 1.6 8.5 7.9 1.4 1 0 0 1 1 1 0 Outer membrane efflux protein PhnG PF06754.12 ORF144310 - 1.7 8.5 10.1 3.5 7.6 10.1 1.4 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG PUD1_2 PF18457.1 ORF141893 - 0.0012 18.9 0.0 1.3 8.9 0.0 2.1 2 0 0 2 2 2 2 Up-Regulated in long-lived daf-2 Rho_GDI PF02115.17 ORF141893 - 0.14 11.9 0.2 14 5.4 0.0 2.1 2 0 0 2 2 2 0 RHO protein GDP dissociation inhibitor Gallidermin PF02052.15 ORF141893 - 6.4 7.2 11.3 13 6.2 0.2 2.8 2 0 0 2 2 2 0 Gallidermin WES_acyltransf PF03007.16 ORF141186 - 6.4e-11 42.5 0.0 8.7e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Wax ester synthase-like Acyl-CoA acyltransferase domain Condensation PF00668.20 ORF141186 - 0.036 12.7 0.0 0.057 12.1 0.0 1.2 1 0 0 1 1 1 0 Condensation domain RPW8 PF05659.11 ORF141186 - 0.15 11.7 0.1 0.31 10.7 0.1 1.5 1 0 0 1 1 1 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 Band_7 PF01145.25 ORF13823 - 5.1e-26 91.8 0.8 7.5e-26 91.2 0.8 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Med2 PF11214.8 ORF13823 - 0.055 13.6 1.3 0.096 12.8 1.3 1.4 1 0 0 1 1 1 0 Mediator complex subunit 2 SATase_N PF06426.14 ORF137058 - 1.4e-39 134.6 0.2 2.1e-39 134.1 0.2 1.2 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal Hexapep PF00132.24 ORF137058 - 6.6e-12 44.7 6.2 6.6e-10 38.3 0.9 3.0 2 1 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF137058 - 0.00014 21.5 5.8 0.00058 19.5 1.1 2.4 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Gly-zipper_OmpA PF13436.6 ORF137058 - 6.5 6.6 8.2 1.1 9.1 3.6 2.1 2 1 0 2 2 2 0 Glycine-zipper domain Glycos_transf_1 PF00534.20 ORF134239 - 3.2e-29 101.7 0.0 4.3e-29 101.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF134239 - 2.6e-25 89.4 0.2 3.3e-25 89.1 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF134239 - 0.0021 18.4 0.0 0.0055 17.1 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 TerY_C PF15616.6 ORF134239 - 0.15 12.2 1.8 0.27 11.4 1.0 1.9 2 0 0 2 2 2 0 TerY-C metal binding domain Metallothi_Euk2 PF12809.7 ORF134239 - 0.17 12.2 2.2 3.3 8.0 0.1 2.5 2 0 0 2 2 2 0 Eukaryotic metallothionein VP_N-CPKC PF11475.8 ORF128897 - 0.031 14.2 0.8 0.1 12.5 0.8 1.9 1 0 0 1 1 1 0 Virion protein N terminal domain E1-E2_ATPase PF00122.20 ORF122124 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF122124 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus E1-E2_ATPase PF00122.20 ORF121441 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF121441 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus ABC_tran PF00005.27 ORF121271 - 3.9e-29 101.9 0.0 5.5e-29 101.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 ORF121271 - 5.7e-07 30.1 0.0 7.7e-07 29.6 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 ORF121271 - 4.8e-06 26.2 0.0 0.0011 18.4 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF121271 - 2.6e-05 24.2 0.0 0.025 14.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 ORF121271 - 0.0002 21.7 0.0 0.00032 21.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF121271 - 0.00027 21.1 0.3 0.0011 19.1 0.2 2.1 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 ORF121271 - 0.00052 20.0 0.1 0.0012 18.8 0.1 1.6 1 1 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 ORF121271 - 0.0007 19.3 0.0 0.0014 18.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 ORF121271 - 0.0047 16.9 0.0 0.022 14.7 0.0 1.9 2 0 0 2 2 2 1 NACHT domain AAA_30 PF13604.6 ORF121271 - 0.015 15.0 0.0 0.039 13.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF121271 - 0.019 14.5 0.0 0.047 13.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 ORF121271 - 0.045 14.0 0.2 0.5 10.6 0.0 2.2 1 1 1 2 2 2 0 Putative exonuclease SbcCD, C subunit Viral_helicase1 PF01443.18 ORF121271 - 0.062 13.0 0.0 0.098 12.4 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase DUF815 PF05673.13 ORF121271 - 0.064 12.4 0.0 0.089 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) FtsK_SpoIIIE PF01580.18 ORF121271 - 0.067 12.5 0.0 0.13 11.6 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family Septin PF00735.18 ORF121271 - 0.076 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Septin AAA_7 PF12775.7 ORF121271 - 0.078 12.5 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_23 PF13476.6 ORF121271 - 0.097 13.2 0.0 0.16 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF121271 - 0.11 12.6 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 ORF121271 - 0.11 12.2 0.0 0.37 10.5 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein RNA_helicase PF00910.22 ORF121271 - 0.11 12.9 0.0 0.2 12.1 0.0 1.4 1 0 0 1 1 1 0 RNA helicase MMR_HSR1 PF01926.23 ORF121271 - 0.11 12.6 0.0 0.3 11.2 0.0 1.7 2 0 0 2 2 1 0 50S ribosome-binding GTPase TsaE PF02367.17 ORF121271 - 0.14 12.2 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NB-ARC PF00931.22 ORF121271 - 0.14 11.3 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Gtr1_RagA PF04670.12 ORF121271 - 0.16 11.3 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region cobW PF02492.19 ORF121271 - 0.16 11.6 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain E1-E2_ATPase PF00122.20 ORF120162 - 1e-17 64.3 2.8 1.9e-17 63.4 0.1 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 ORF120162 - 5.9e-11 41.9 0.0 1e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus CENP-F_leu_zip PF10473.9 ORF119800 - 0.0024 17.9 21.0 0.0024 17.9 21.0 4.0 1 1 1 3 3 3 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 JAKMIP_CC3 PF16034.5 ORF119800 - 0.014 15.3 12.4 0.014 15.3 12.4 3.2 1 1 2 3 3 2 0 JAKMIP CC3 domain DUF1515 PF07439.11 ORF119800 - 0.025 14.6 0.9 0.025 14.6 0.9 3.4 1 1 1 3 3 3 0 Protein of unknown function (DUF1515) TMF_TATA_bd PF12325.8 ORF119800 - 0.027 14.7 12.4 0.027 14.7 12.4 4.2 2 2 2 4 4 4 0 TATA element modulatory factor 1 TATA binding SHE3 PF17078.5 ORF119800 - 0.15 11.8 44.5 1.1 8.9 1.8 3.2 1 1 1 2 2 2 0 SWI5-dependent HO expression protein 3 MerR-DNA-bind PF09278.11 ORF119800 - 0.3 11.7 15.7 1.5 9.4 0.4 3.8 3 1 0 3 3 3 0 MerR, DNA binding EzrA PF06160.12 ORF119800 - 0.56 8.3 48.3 0.076 11.2 28.6 2.1 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA ADIP PF11559.8 ORF119800 - 0.65 10.1 58.8 2.8 8.0 8.7 4.0 1 1 2 4 4 4 0 Afadin- and alpha -actinin-Binding Spc7 PF08317.11 ORF119800 - 1.5 7.6 61.6 0.26 10.1 24.5 2.6 1 1 2 3 3 3 0 Spc7 kinetochore protein Filament PF00038.21 ORF119800 - 1.7 8.1 48.7 0.024 14.2 18.9 2.3 1 1 1 2 2 2 0 Intermediate filament protein DUF4795 PF16043.5 ORF119800 - 3.1 7.3 52.1 1 8.9 25.7 3.2 1 1 1 3 3 3 0 Domain of unknown function (DUF4795) DUF1664 PF07889.12 ORF119800 - 3.7 7.6 36.5 0.37 10.8 4.0 3.6 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) GAS PF13851.6 ORF119800 - 6.4 6.1 61.6 0.11 11.9 18.1 3.8 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding Phage_int_SAM_2 PF12834.7 ORF114510 - 0.08 13.6 0.0 0.16 12.7 0.0 1.4 1 0 0 1 1 1 0 Phage integrase, N-terminal TAL_FSA PF00923.19 ORF114266 - 2.8e-66 223.8 0.0 3.3e-66 223.6 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase Ribosomal_L28e PF01778.17 ORF113563 - 1.4e-33 116.1 0.3 1.4e-33 116.1 0.3 1.7 2 0 0 2 2 2 1 Ribosomal L28e protein family Mak16 PF04874.14 ORF113563 - 2.2e-25 89.2 13.4 4.9e-25 88.1 13.4 1.6 1 0 0 1 1 1 1 Mak16 protein C-terminal region Med9 PF07544.13 ORF113563 - 0.12 12.5 0.4 0.12 12.5 0.4 2.2 3 0 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 Gp58 PF07902.11 ORF110528 - 0.061 11.6 2.7 0.074 11.3 2.7 1.1 1 0 0 1 1 1 0 gp58-like protein Allexi_40kDa PF05549.11 ORF110528 - 0.12 11.8 1.5 0.23 10.9 1.5 1.4 1 0 0 1 1 1 0 Allexivirus 40kDa protein PPS_PS PF02006.16 ORF110528 - 0.14 11.7 1.8 6.4 6.3 0.6 2.3 1 1 1 2 2 2 0 Phosphopantothenate/pantothenate synthetase SAP130_C PF16014.5 ORF110528 - 0.19 10.8 0.2 0.29 10.2 0.2 1.2 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus FliD_N PF02465.18 ORF110528 - 0.23 12.2 1.2 0.57 10.9 0.2 2.3 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus ING PF12998.7 ORF110528 - 0.44 11.2 10.1 0.42 11.2 2.7 2.8 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding DUF1870 PF08965.10 ORF110528 - 0.59 10.2 6.5 55 3.8 6.5 2.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1870) DHR10 PF18595.1 ORF109374 - 0.0044 17.1 2.9 0.011 15.8 2.9 1.7 1 0 0 1 1 1 1 Designed helical repeat protein 10 domain FlaC_arch PF05377.11 ORF109374 - 0.0068 16.8 3.9 0.012 16.0 1.8 2.2 2 0 0 2 2 2 1 Flagella accessory protein C (FlaC) GIT_CC PF16559.5 ORF109374 - 0.0098 15.7 4.7 0.38 10.6 3.7 2.3 2 0 0 2 2 2 1 GIT coiled-coil Rho guanine nucleotide exchange factor DUF3450 PF11932.8 ORF109374 - 0.03 13.6 2.9 0.063 12.6 2.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) ZapB PF06005.12 ORF109374 - 0.039 14.4 5.5 0.039 14.4 5.5 2.3 2 1 0 2 2 2 0 Cell division protein ZapB Lipoprotein_7 PF01540.16 ORF109374 - 0.046 13.0 6.0 0.26 10.5 0.6 2.1 2 0 0 2 2 2 0 Adhesin lipoprotein DUF848 PF05852.11 ORF109374 - 0.052 13.7 8.1 0.56 10.3 0.9 2.5 2 1 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) Utp11 PF03998.13 ORF109374 - 0.054 13.4 2.5 0.059 13.3 2.5 1.2 1 0 0 1 1 1 0 Utp11 protein Cor1 PF04803.12 ORF109374 - 0.054 13.7 13.4 0.2 11.9 4.4 2.3 2 0 0 2 2 2 0 Cor1/Xlr/Xmr conserved region FPP PF05911.11 ORF109374 - 0.056 11.6 3.4 0.034 12.4 0.9 1.7 2 0 0 2 2 2 0 Filament-like plant protein, long coiled-coil SlyX PF04102.12 ORF109374 - 0.098 13.3 5.8 0.069 13.8 3.5 1.9 2 0 0 2 2 2 0 SlyX ISG65-75 PF11727.8 ORF109374 - 0.16 11.2 1.2 0.31 10.2 1.2 1.4 1 0 0 1 1 1 0 Invariant surface glycoprotein NYD-SP28_assoc PF14775.6 ORF109374 - 0.2 11.8 13.9 0.084 13.0 5.7 3.5 2 1 1 3 3 3 0 Sperm tail C-terminal domain BLOC1_2 PF10046.9 ORF109374 - 0.24 11.7 5.4 0.41 11.0 2.6 2.4 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 NPV_P10 PF05531.12 ORF109374 - 0.26 11.8 2.4 0.37 11.3 1.2 1.8 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein TolA_bind_tri PF16331.5 ORF109374 - 0.36 10.9 6.5 0.47 10.6 5.5 1.7 2 0 0 2 2 1 0 TolA binding protein trimerisation bZIP_2 PF07716.15 ORF109374 - 0.49 10.5 5.2 0.81 9.8 3.2 2.3 2 0 0 2 2 2 0 Basic region leucine zipper APG6_N PF17675.1 ORF109374 - 0.68 10.5 10.6 1 9.9 5.2 2.7 3 0 0 3 3 3 0 Apg6 coiled-coil region DUF5082 PF16888.5 ORF109374 - 0.71 10.2 8.0 0.073 13.3 2.6 2.0 2 1 0 3 3 3 0 Domain of unknown function (DUF5082) E2F_CC-MB PF16421.5 ORF109374 - 1 9.8 7.4 0.5 10.8 1.0 2.6 3 0 0 3 3 2 0 E2F transcription factor CC-MB domain Osmo_CC PF08946.10 ORF109374 - 1.7 8.9 8.2 1 9.7 0.9 2.6 1 1 1 2 2 2 0 Osmosensory transporter coiled coil DUF16 PF01519.16 ORF109374 - 7.1 7.2 13.1 1.2 9.6 3.4 2.7 2 1 0 2 2 2 0 Protein of unknown function DUF16 UPRTase PF14681.6 ORF109171 - 6.3e-60 202.2 0.0 7.9e-60 201.9 0.0 1.1 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 ORF109171 - 0.00069 19.2 0.0 0.00092 18.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PPS_PS PF02006.16 ORF102604 - 0.14 11.7 1.8 6.4 6.3 0.6 2.3 1 1 1 2 2 2 0 Phosphopantothenate/pantothenate synthetase SAP130_C PF16014.5 ORF102604 - 0.19 10.8 0.3 0.3 10.2 0.3 1.2 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus FliD_N PF02465.18 ORF102604 - 0.21 12.3 1.1 0.55 11.0 0.2 2.3 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus ING PF12998.7 ORF102604 - 0.39 11.3 9.8 0.4 11.3 2.6 2.8 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding DUF1870 PF08965.10 ORF102604 - 0.51 10.4 6.3 50 3.9 6.3 2.6 1 1 0 1 1 1 0 Domain of unknown function (DUF1870) RHINO PF15319.6 ORF101759 - 8.6 6.3 10.8 1.8 8.5 3.1 2.0 2 0 0 2 2 2 0 RAD9, RAD1, HUS1-interacting nuclear orphan protein Vma12 PF11712.8 NODE_26072_length_814_cov_79.143774_g20375_i0forward_frame_1 - 0.17 11.9 2.0 0.5 10.4 2.0 2.0 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase F-actin_cap_A PF01267.17 NODE_26064_length_814_cov_129.336329_g20367_i0forward_frame_1 - 1.1e-32 113.6 0.0 1.3e-32 113.3 0.0 1.1 1 0 0 1 1 1 1 F-actin capping protein alpha subunit SnAC PF14619.6 NODE_26064_length_814_cov_129.336329_g20367_i0forward_frame_1 - 0.034 14.7 0.0 0.14 12.8 0.0 2.1 1 0 0 1 1 1 0 Snf2-ATP coupling, chromatin remodelling complex GYR PF02756.14 NODE_25909_length_818_cov_3.252874_g20236_i0reverse_frame_2 - 2.7 7.8 5.2 6.1 6.7 5.2 1.6 1 0 0 1 1 1 0 GYR motif C2 PF00168.30 NODE_25909_length_818_cov_3.252874_g20236_i0forward_frame_2 - 9.6e-09 35.5 0.0 1.1e-05 25.6 0.0 2.3 2 0 0 2 2 2 2 C2 domain THP2 PF09432.10 NODE_25887_length_818_cov_218.429119_g20215_i0reverse_frame_3 - 0.25 11.4 2.6 2.8 8.0 0.1 2.2 2 0 0 2 2 2 0 Tho complex subunit THP2 OrsD PF12013.8 NODE_25887_length_818_cov_218.429119_g20215_i0reverse_frame_3 - 4.3 7.8 6.4 0.38 11.2 0.9 2.1 2 1 0 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D TMEM132D_C PF15706.5 NODE_25873_length_818_cov_745.524904_g20206_i0reverse_frame_2 - 4.8 7.0 5.5 0.75 9.6 0.1 2.2 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Queuosine_synth PF02547.15 ORF99894 - 1.2e-100 336.8 0.0 1.3e-100 336.7 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein Methyltransf_11 PF08241.12 ORF98783 - 5.2e-20 71.9 0.0 8.2e-20 71.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF98783 - 6.2e-19 68.5 0.0 1e-18 67.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF98783 - 3.6e-16 59.3 0.0 4.7e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF98783 - 1e-14 54.4 0.0 1.4e-14 54.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF98783 - 3.1e-12 46.6 0.0 4.8e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF98783 - 4.2e-12 46.7 0.0 7e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF98783 - 1.8e-08 34.0 0.0 2.4e-08 33.6 0.0 1.4 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 ORF98783 - 1.1e-07 31.6 0.0 2.4e-07 30.5 0.0 1.5 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW MTS PF05175.14 ORF98783 - 3.2e-05 23.5 0.0 7.9e-05 22.3 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase small domain DREV PF05219.12 ORF98783 - 5.6e-05 22.4 0.0 0.00013 21.2 0.0 1.6 1 1 0 1 1 1 1 DREV methyltransferase Sterol_MT_C PF08498.10 ORF98783 - 6.8e-05 23.1 0.0 0.00013 22.2 0.0 1.4 1 0 0 1 1 1 1 Sterol methyltransferase C-terminal Methyltransf_2 PF00891.18 ORF98783 - 0.0043 16.4 0.0 0.022 14.1 0.0 1.9 1 1 0 1 1 1 1 O-methyltransferase domain PCMT PF01135.19 ORF98783 - 0.0075 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 ORF98783 - 0.0087 16.1 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 ORF98783 - 0.015 14.2 0.0 0.022 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_8 PF05148.15 ORF98783 - 0.027 14.3 0.1 1.6 8.6 0.0 2.6 2 1 0 3 3 3 0 Hypothetical methyltransferase PrmA PF06325.13 ORF98783 - 0.028 13.8 0.0 0.037 13.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) ADH_zinc_N PF00107.26 ORF98783 - 0.04 13.9 0.0 0.072 13.1 0.0 1.5 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DOT1 PF08123.13 ORF98783 - 0.044 13.3 0.0 0.08 12.5 0.0 1.5 1 1 0 1 1 1 0 Histone methylation protein DOT1 TehB PF03848.14 ORF98783 - 0.096 12.1 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB TylF PF05711.11 ORF98783 - 0.17 11.1 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) WD40 PF00400.32 ORF95072 - 1.7e-11 44.5 0.8 0.00016 22.4 0.0 4.7 5 1 1 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF95072 - 1e-07 32.1 0.1 0.0028 17.9 0.0 3.5 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain PQQ_2 PF13360.6 ORF95072 - 0.12 12.0 0.0 0.17 11.4 0.0 1.4 1 1 0 1 1 1 0 PQQ-like domain Thg1C PF14413.6 ORF92191 - 1.5e-33 115.6 19.6 2.1e-31 108.6 19.6 3.0 1 1 0 1 1 1 1 Thg1 C terminal domain Thg1 PF04446.12 ORF92191 - 5.6e-11 42.6 0.8 8.9e-11 41.9 0.2 1.6 2 0 0 2 2 2 1 tRNAHis guanylyltransferase zf-RING_2 PF13639.6 ORF85632 - 1.8e-13 50.6 6.2 3.8e-13 49.6 6.2 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF85632 - 6.9e-11 41.7 4.4 1.7e-10 40.4 4.4 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF85632 - 4.1e-08 33.4 7.3 1.2e-07 31.9 7.3 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF85632 - 7.8e-08 32.0 6.0 1.7e-07 31.0 6.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF85632 - 3.5e-06 26.9 4.3 8.6e-06 25.6 4.3 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF85632 - 3.8e-06 26.8 3.2 6e-06 26.2 0.9 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF85632 - 6.7e-06 25.9 3.5 6.7e-06 25.9 3.5 1.7 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF85632 - 1.9e-05 24.5 7.2 1.9e-05 24.5 7.2 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF85632 - 0.00059 19.7 4.5 0.0014 18.4 4.4 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF85632 - 0.00078 19.6 7.6 0.026 14.7 7.6 2.4 1 1 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 ORF85632 - 0.0016 18.5 6.0 0.0016 18.5 6.0 1.7 2 0 0 2 2 1 1 RING-variant domain zf-ANAPC11 PF12861.7 ORF85632 - 0.0017 18.3 3.6 0.0068 16.4 3.7 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF85632 - 0.012 15.2 2.9 0.036 13.7 2.9 1.8 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Baculo_RING PF05883.11 ORF85632 - 0.027 14.5 0.5 0.058 13.4 0.5 1.5 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Cnd3 PF12719.7 ORF85632 - 0.043 13.0 0.1 0.071 12.3 0.1 1.4 1 0 0 1 1 1 0 Nuclear condensing complex subunits, C-term domain Prok-RING_1 PF14446.6 ORF85632 - 0.077 12.9 4.5 0.56 10.2 1.1 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-RING_4 PF14570.6 ORF85632 - 6.1 6.7 12.0 0.089 12.6 4.7 1.8 2 0 0 2 2 1 0 RING/Ubox like zinc-binding domain EF-hand_1 PF00036.32 ORF81537 - 0.00025 20.4 0.0 0.00046 19.5 0.0 1.4 1 0 0 1 1 1 1 EF hand EF-hand_5 PF13202.6 ORF81537 - 0.018 14.5 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 ORF81537 - 0.044 13.7 0.0 0.088 12.8 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_8 PF13833.6 ORF81537 - 0.053 13.4 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_7 PF13499.6 ORF81537 - 0.09 13.2 0.0 0.23 11.9 0.0 1.6 2 0 0 2 2 2 0 EF-hand domain pair DUF4586 PF15239.6 ORF69129 - 2.6e-22 80.4 15.3 9.9e-22 78.5 15.3 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4586) AA_permease PF00324.21 ORF67230 - 6.1e-69 232.8 20.6 6.8e-69 232.7 20.6 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF67230 - 6.4e-22 78.0 18.8 7.4e-22 77.8 18.8 1.0 1 0 0 1 1 1 1 Amino acid permease # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks73.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks73.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks73.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks73.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:27 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Amino_oxidase PF01593.24 ORF66828 - 7.1e-06 25.6 0.4 8.6e-05 22.0 0.4 2.4 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase WD40 PF00400.32 ORF60355 - 1.2e-14 54.4 0.9 0.00059 20.6 0.0 4.7 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF60355 - 1.7e-13 50.7 0.0 6.9e-05 23.1 0.0 4.2 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 ORF60355 - 3e-05 23.5 3.6 0.028 13.8 0.3 3.0 2 2 0 2 2 2 2 WD40-like domain DUF4221 PF13970.6 ORF60355 - 0.046 13.3 0.5 0.39 10.2 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4221) SpoIIIAC PF06686.11 ORF55937 - 0.016 15.4 3.0 13 6.1 0.0 4.2 4 0 0 4 4 4 0 Stage III sporulation protein AC/AD protein family FGFR3_TM PF18123.1 ORF55937 - 2.5 7.7 35.6 0.12 11.9 1.6 5.6 5 0 0 5 5 5 0 Fibroblast growth factor receptor 3 transmembrane domain 2OG-FeII_Oxy_3 PF13640.6 ORF55690 - 3.5e-11 43.9 0.0 5.8e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF55690 - 0.0098 16.5 0.0 0.028 15.1 0.0 1.8 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily TraH_2 PF06871.11 ORF55690 - 0.022 14.4 0.0 0.032 13.9 0.0 1.2 1 0 0 1 1 1 0 TraH_2 RCC1_2 PF13540.6 ORF5334 - 3.1e-05 23.6 8.3 0.74 9.7 0.1 3.6 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Stc1 PF12898.7 ORF5334 - 0.0099 16.4 0.5 0.73 10.4 0.0 2.5 1 1 1 2 2 2 2 Stc1 domain Penicillinase_R PF03965.16 ORF44954 - 0.077 13.3 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor TPH PF13868.6 ORF43721 - 2.6e-17 62.4 78.9 3.1e-17 62.1 78.9 1.0 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain ER PF01133.17 ORF42257 - 0.01 15.8 0.9 0.02 14.9 0.3 1.9 2 0 0 2 2 2 0 Enhancer of rudimentary ERGIC_N PF13850.6 ORF42257 - 0.013 15.8 0.1 0.023 15.1 0.1 1.4 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ArAE_1_C PF11728.8 ORF40381 - 0.0017 18.4 4.8 0.013 15.5 4.8 2.3 1 1 0 1 1 1 1 Putative aromatic acid exporter C-terminal domain CLU_N PF15044.6 ORF40381 - 0.0096 16.3 2.1 2.1 8.8 0.6 2.5 1 1 1 2 2 2 2 Mitochondrial function, CLU-N-term FANCI_S1 PF14675.6 ORF40381 - 0.018 14.6 0.0 0.82 9.2 0.0 2.8 1 1 2 3 3 3 0 FANCI solenoid 1 COG2 PF06148.11 ORF40381 - 0.47 10.5 4.1 0.52 10.4 1.9 2.3 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 MFS_1 PF07690.16 ORF39642 - 0.00069 18.6 13.5 0.0015 17.5 13.4 1.5 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF39642 - 0.0096 14.8 13.0 0.039 12.8 5.1 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter DUF2721 PF11026.8 ORF39642 - 0.19 11.6 12.8 6.8 6.6 5.1 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2721) OAD_gamma PF04277.13 ORF39642 - 0.2 12.3 2.5 0.48 11.1 0.0 2.5 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain CobS_N PF12556.8 ORF36558 - 0.12 12.1 0.0 0.26 11.0 0.0 1.5 1 0 0 1 1 1 0 Cobaltochelatase CobS subunit N terminal Mito_carr PF00153.27 ORF32730 - 1.4e-31 108.2 5.9 7.9e-21 73.8 0.2 3.1 3 0 0 3 3 3 2 Mitochondrial carrier protein Sugar_tr PF00083.24 ORF32255 - 1.2e-23 83.7 18.9 1.4e-23 83.5 18.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter Hexapep PF00132.24 ORF3164 - 8.2e-18 63.4 5.1 2.9e-07 29.9 0.5 4.2 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF3164 - 3.1e-05 23.6 6.6 0.0061 16.3 0.6 3.6 3 1 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Prot_ATP_OB_N PF17758.1 ORF3164 - 0.13 12.0 0.4 0.65 9.7 0.1 2.1 2 0 0 2 2 2 0 Proteasomal ATPase OB N-terminal domain TPR_2 PF07719.17 ORF29738 - 0.00012 21.9 0.6 0.00066 19.6 0.0 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF29738 - 0.0035 17.1 0.0 0.012 15.5 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 ORF29738 - 0.0071 16.5 2.0 0.014 15.6 1.0 2.0 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF29738 - 0.017 15.3 0.0 0.35 11.2 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF29738 - 0.28 12.1 0.1 0.28 12.1 0.1 4.0 3 1 1 4 4 4 0 Tetratricopeptide repeat Methyltransf_11 PF08241.12 ORF29249 - 5.2e-20 71.9 0.0 8.2e-20 71.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF29249 - 6.2e-19 68.5 0.0 1e-18 67.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF29249 - 3.6e-16 59.3 0.0 4.7e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF29249 - 1e-14 54.4 0.0 1.4e-14 54.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF29249 - 3.1e-12 46.6 0.0 4.8e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF29249 - 4.2e-12 46.7 0.0 7e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF29249 - 1.8e-08 34.0 0.0 2.4e-08 33.6 0.0 1.4 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 ORF29249 - 1.1e-07 31.6 0.0 2.4e-07 30.5 0.0 1.5 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW MTS PF05175.14 ORF29249 - 3.2e-05 23.5 0.0 7.9e-05 22.3 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase small domain DREV PF05219.12 ORF29249 - 5.6e-05 22.4 0.0 0.00013 21.2 0.0 1.6 1 1 0 1 1 1 1 DREV methyltransferase Sterol_MT_C PF08498.10 ORF29249 - 6.8e-05 23.1 0.0 0.00013 22.2 0.0 1.4 1 0 0 1 1 1 1 Sterol methyltransferase C-terminal Methyltransf_2 PF00891.18 ORF29249 - 0.0043 16.4 0.0 0.022 14.1 0.0 1.9 1 1 0 1 1 1 1 O-methyltransferase domain PCMT PF01135.19 ORF29249 - 0.0075 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_32 PF13679.6 ORF29249 - 0.0087 16.1 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 ORF29249 - 0.015 14.2 0.0 0.022 13.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_8 PF05148.15 ORF29249 - 0.027 14.3 0.1 1.6 8.6 0.0 2.6 2 1 0 3 3 3 0 Hypothetical methyltransferase PrmA PF06325.13 ORF29249 - 0.028 13.8 0.0 0.037 13.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) ADH_zinc_N PF00107.26 ORF29249 - 0.04 13.9 0.0 0.072 13.1 0.0 1.5 1 1 0 1 1 1 0 Zinc-binding dehydrogenase DOT1 PF08123.13 ORF29249 - 0.044 13.3 0.0 0.08 12.5 0.0 1.5 1 1 0 1 1 1 0 Histone methylation protein DOT1 TehB PF03848.14 ORF29249 - 0.096 12.1 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB TylF PF05711.11 ORF29249 - 0.17 11.1 0.0 0.25 10.6 0.0 1.2 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) RRM_1 PF00076.22 ORF26313 - 6e-20 70.8 0.0 1.2e-19 69.9 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 ORF26313 - 2.7e-10 40.2 1.1 2.7e-10 40.2 1.1 2.1 3 0 0 3 3 3 1 WW domain RRM_5 PF13893.6 ORF26313 - 0.0052 16.4 0.0 0.0082 15.7 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ish1 PF10281.9 ORF26313 - 0.011 16.0 0.1 0.11 12.8 0.0 2.4 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein CSD PF00313.22 ORF26313 - 0.028 14.3 0.6 0.084 12.7 0.6 1.8 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain RNA_bind PF08675.11 ORF26313 - 0.036 14.1 0.3 0.12 12.4 0.1 2.0 2 1 0 2 2 2 0 RNA binding domain Nup35_RRM_2 PF14605.6 ORF26313 - 0.037 14.0 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif CEP209_CC5 PF16574.5 ORF22665 - 0.00062 19.9 4.4 0.00062 19.9 4.4 2.0 2 0 0 2 2 2 1 Coiled-coil region of centrosome protein CE290 DUF4407 PF14362.6 ORF22665 - 0.68 9.2 7.3 1.7 7.9 7.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Cnn_1N PF07989.11 ORF22665 - 5.5 7.2 14.4 0.15 12.2 3.3 3.4 4 0 0 4 4 4 0 Centrosomin N-terminal motif 1 BRCT PF00533.26 ORF19283 - 0.0013 19.0 0.0 0.42 11.0 0.0 3.0 2 1 0 2 2 2 2 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 ORF19283 - 0.0016 18.8 0.0 2.4 8.6 0.0 3.0 2 1 0 2 2 2 2 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 ORF16284 - 0.0013 19.0 0.0 0.42 11.0 0.0 3.0 2 1 0 2 2 2 2 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 ORF16284 - 0.0016 18.8 0.0 2.4 8.6 0.0 3.0 2 1 0 2 2 2 2 BRCT domain, a BRCA1 C-terminus domain MORN PF02493.20 ORF151380 - 1.4e-38 128.5 51.9 8.8e-07 28.5 0.7 7.6 7 0 0 7 7 7 7 MORN repeat Ank_2 PF12796.7 ORF150832 - 4.4e-30 104.1 0.1 1.3e-12 48.1 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF150832 - 3.2e-22 78.6 0.6 6.7e-07 29.7 0.0 4.1 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF150832 - 1.1e-20 73.4 3.7 0.00016 21.9 0.0 6.0 1 1 5 6 6 6 6 Ankyrin repeats (many copies) Ank PF00023.30 ORF150832 - 6.2e-20 70.7 1.1 0.0048 17.3 0.0 6.3 5 1 1 6 6 6 6 Ankyrin repeat Ank_3 PF13606.6 ORF150832 - 7.2e-18 62.8 0.4 0.14 12.8 0.0 6.5 7 0 0 7 7 7 5 Ankyrin repeat RVP PF00077.20 ORF150832 - 0.00041 20.6 1.8 0.021 15.1 0.0 2.7 2 1 0 3 3 3 1 Retroviral aspartyl protease SatRNA_48 PF17485.2 ORF150832 - 0.00091 18.4 0.0 0.75 8.9 0.0 2.2 1 1 1 2 2 2 2 Satellite RNA 48 kDa protein Penicillinase_R PF03965.16 ORF138117 - 0.077 13.3 0.0 0.12 12.7 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor rve PF00665.26 ORF135864 - 1.1e-26 93.4 0.0 2e-26 92.5 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 ORF135864 - 6.1e-15 54.8 0.1 1.8e-14 53.3 0.1 1.9 1 0 0 1 1 1 1 Integrase core domain rve_2 PF13333.6 ORF135864 - 4.8e-12 45.9 0.8 1.1e-11 44.7 0.8 1.6 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.6 ORF135864 - 8.5e-11 41.8 3.9 2.1e-10 40.6 3.9 1.7 1 0 0 1 1 1 1 HTH-like domain DDE_Tnp_IS240 PF13610.6 ORF135864 - 6.6e-05 23.2 0.4 9.5e-05 22.6 0.0 1.4 2 0 0 2 2 2 1 DDE domain Thg1C PF14413.6 ORF135163 - 2.4e-32 111.6 19.9 1.7e-30 105.7 19.9 2.9 1 1 0 1 1 1 1 Thg1 C terminal domain Thg1 PF04446.12 ORF135163 - 5.6e-11 42.6 0.8 8.9e-11 41.9 0.2 1.6 2 0 0 2 2 2 1 tRNAHis guanylyltransferase RNase_H PF00075.24 ORF134700 - 0.00049 20.3 0.0 0.00084 19.5 0.0 1.5 1 1 0 1 1 1 1 RNase H BRX PF08381.11 ORF132401 - 0.16 11.4 1.0 0.67 9.4 0.2 2.2 2 0 0 2 2 2 0 Transcription factor regulating root and shoot growth via Pin3 LysR_substrate PF03466.20 ORF129724 - 8.3e-16 58.0 0.0 1.1e-15 57.6 0.0 1.2 1 0 0 1 1 1 1 LysR substrate binding domain CS PF04969.16 ORF126202 - 0.0017 19.3 0.0 0.0057 17.6 0.0 1.9 1 1 0 1 1 1 1 CS domain RRM_1 PF00076.22 ORF124703 - 6e-20 70.8 0.0 1.2e-19 69.9 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 ORF124703 - 2.7e-10 40.2 1.1 2.7e-10 40.2 1.1 2.1 3 0 0 3 3 3 1 WW domain RRM_5 PF13893.6 ORF124703 - 0.0052 16.4 0.0 0.0082 15.7 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ish1 PF10281.9 ORF124703 - 0.011 16.0 0.1 0.11 12.8 0.0 2.4 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein CSD PF00313.22 ORF124703 - 0.028 14.3 0.6 0.084 12.7 0.6 1.8 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain RNA_bind PF08675.11 ORF124703 - 0.036 14.1 0.3 0.12 12.4 0.1 2.0 2 1 0 2 2 2 0 RNA binding domain Nup35_RRM_2 PF14605.6 ORF124703 - 0.037 14.0 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Exo_endo_phos PF03372.23 ORF124041 - 1.6e-06 27.8 0.0 5e-06 26.2 0.0 1.7 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family PhnG PF06754.12 ORF124041 - 0.048 13.6 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 Phosphonate metabolism protein PhnG Trypan_PARP PF05887.11 ORF123954 - 2.2 8.3 5.5 0.44 10.5 2.1 1.6 2 0 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) Vac14_Fab1_bd PF12755.7 ORF119508 - 0.079 13.6 0.1 0.26 11.9 0.0 1.9 2 0 0 2 2 2 0 Vacuolar 14 Fab1-binding region VBS PF08913.10 ORF118123 - 0.0044 17.5 0.1 0.015 15.8 0.0 1.8 2 0 0 2 2 2 1 Vinculin Binding Site BRCT PF00533.26 ORF116314 - 0.0013 19.0 0.0 0.42 11.0 0.0 3.0 2 1 0 2 2 2 2 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 ORF116314 - 0.0016 18.8 0.0 2.4 8.6 0.0 3.0 2 1 0 2 2 2 2 BRCT domain, a BRCA1 C-terminus domain Archaeal_AmoA PF12942.7 ORF116014 - 0.16 11.7 0.0 1.3 8.7 0.0 2.0 2 0 0 2 2 2 0 Archaeal ammonia monooxygenase subunit A (AmoA) zf-RING_2 PF13639.6 ORF114660 - 1.4e-13 50.9 6.2 3.8e-13 49.6 6.2 1.8 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF114660 - 6.4e-11 41.8 4.4 1.7e-10 40.4 4.4 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF114660 - 4e-08 33.4 7.3 1.2e-07 31.9 7.3 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF114660 - 6.4e-08 32.3 6.0 1.7e-07 31.0 6.0 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF114660 - 2.9e-06 27.1 4.3 8.6e-06 25.6 4.3 1.9 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF114660 - 3.3e-06 27.0 3.2 6e-06 26.2 0.9 2.4 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF114660 - 6.7e-06 25.9 3.5 6.7e-06 25.9 3.5 1.8 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF114660 - 1.9e-05 24.5 7.2 1.9e-05 24.5 7.2 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF114660 - 0.00054 19.8 4.5 0.0014 18.4 4.4 1.8 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF114660 - 0.00072 19.7 7.6 0.026 14.7 7.6 2.5 1 1 0 1 1 1 1 FANCL C-terminal domain RINGv PF12906.7 ORF114660 - 0.0016 18.5 6.0 0.0016 18.5 6.0 1.8 2 0 0 2 2 1 1 RING-variant domain zf-ANAPC11 PF12861.7 ORF114660 - 0.0018 18.3 3.6 0.0068 16.4 3.7 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF114660 - 0.013 15.1 2.9 0.036 13.7 2.9 1.8 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Cnd3 PF12719.7 ORF114660 - 0.024 13.9 0.0 0.038 13.2 0.0 1.3 1 0 0 1 1 1 0 Nuclear condensing complex subunits, C-term domain Baculo_RING PF05883.11 ORF114660 - 0.026 14.5 0.5 0.058 13.4 0.5 1.6 1 0 0 1 1 1 0 Baculovirus U-box/Ring-like domain Prok-RING_1 PF14446.6 ORF114660 - 0.076 13.0 4.5 0.56 10.2 1.1 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Vps51 PF08700.11 ORF114326 - 0.0076 16.3 6.6 0.0086 16.1 4.4 2.3 1 1 0 1 1 1 1 Vps51/Vps67 Laminin_II PF06009.12 ORF114326 - 0.0076 16.3 4.8 0.0076 16.3 4.8 2.4 1 1 1 2 2 2 1 Laminin Domain II DUF3294 PF07957.11 ORF114326 - 0.012 15.4 4.2 0.012 15.4 4.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3294) HeLo PF14479.6 ORF114326 - 0.24 11.2 6.8 0.26 11.1 5.0 2.0 1 1 1 2 2 2 0 Prion-inhibition and propagation DUF2312 PF10073.9 ORF114326 - 0.84 9.3 6.3 1.9 8.2 0.1 3.2 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) Chloroa_b-bind PF00504.21 ORF114194 - 1.1e-34 120.3 1.1 4.1e-34 118.5 0.1 1.9 2 0 0 2 2 2 1 Chlorophyll A-B binding protein MFS_1 PF07690.16 ORF109712 - 7e-21 74.5 11.0 8.2e-21 74.3 11.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily OATP PF03137.20 ORF109712 - 0.00092 17.6 9.9 0.076 11.3 2.3 2.6 1 1 0 3 3 3 2 Organic Anion Transporter Polypeptide (OATP) family PIRT PF15099.6 ORF109712 - 1.8 8.1 4.3 0.46 10.1 0.3 2.0 2 0 0 2 2 2 0 Phosphoinositide-interacting protein family TRP PF06011.12 ORF103822 - 0.21 10.3 22.3 0.37 9.5 22.3 1.3 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel TMEM219 PF14940.6 ORF103822 - 0.22 11.0 4.5 2.8 7.4 0.9 2.9 2 1 0 3 3 3 0 Transmembrane 219 LAM_C PF12544.8 ORF103456 - 0.056 13.6 0.7 0.14 12.4 0.7 1.7 1 0 0 1 1 1 0 Lysine-2,3-aminomutase LKAAEAR PF15478.6 ORF103456 - 0.59 10.4 5.0 0.21 11.9 1.0 2.1 1 1 0 2 2 2 0 Family of unknown function with LKAAEAR motif DUF2682 PF10909.8 ORF102506 - 0.78 10.3 8.3 3.8 8.1 0.4 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2682) MpPF26 PF07666.11 ORF101745 - 0.036 14.2 10.2 0.14 12.2 5.2 2.3 1 1 1 2 2 2 0 M penetrans paralogue family 26 zf-LITAF-like PF10601.9 ORF101745 - 4.2 7.7 16.5 0.28 11.5 1.7 3.3 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain Fer4_4 PF12800.7 NODE_26156_length_812_cov_109.227799_g20445_i0forward_frame_1 - 8.9 7.1 9.8 32 5.4 0.3 3.3 2 1 0 2 2 2 0 4Fe-4S binding domain FA_desaturase PF00487.24 NODE_26074_length_814_cov_71.501926_g20377_i0reverse_frame_2 - 1.9e-18 67.2 0.6 3e-18 66.6 0.6 1.2 1 0 0 1 1 1 1 Fatty acid desaturase IMPa_helical PF18642.1 NODE_26072_length_814_cov_79.143774_g20375_i0reverse_frame_3 - 0.014 15.8 2.3 0.024 15.0 0.6 2.4 1 1 1 2 2 2 0 Immunomodulating metalloprotease helical domain GED PF02212.18 NODE_26072_length_814_cov_79.143774_g20375_i0reverse_frame_3 - 1.2 9.3 6.6 0.28 11.4 1.3 2.5 2 0 0 2 2 2 0 Dynamin GTPase effector domain TMEM237 PF15383.6 NODE_26072_length_814_cov_79.143774_g20375_i0reverse_frame_3 - 4.1 6.4 11.5 0.26 10.3 4.9 2.1 2 1 0 2 2 2 0 Transmembrane protein 237 PTPlike_phytase PF14566.6 NODE_26072_length_814_cov_79.143774_g20375_i0reverse_frame_3 - 4.4 7.4 11.6 15 5.6 8.0 2.7 1 1 1 2 2 2 0 Inositol hexakisphosphate CAML PF14963.6 NODE_26072_length_814_cov_79.143774_g20375_i0forward_frame_3 - 1.2 9.2 6.5 2.9 8.0 6.5 1.6 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand HHH_7 PF14635.6 ORF98399 - 0.2 12.0 0.0 0.33 11.3 0.0 1.3 1 0 0 1 1 1 0 Helix-hairpin-helix motif Macro PF01661.21 ORF96737 - 2.6e-32 111.3 3.5 2.9e-32 111.2 0.1 2.5 1 1 1 3 3 3 1 Macro domain SRP-alpha_N PF04086.13 ORF96737 - 0.12 12.3 12.0 0.16 11.9 12.0 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal DUF4820 PF16091.5 ORF96737 - 0.24 10.7 9.9 0.39 10.0 9.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) DDHD PF02862.17 ORF96737 - 0.33 11.1 3.6 0.41 10.8 3.6 1.2 1 0 0 1 1 1 0 DDHD domain Neur_chan_memb PF02932.16 ORF96737 - 0.5 10.4 2.3 0.58 10.2 2.3 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region GNAT_acetyltr_2 PF13718.6 ORF96737 - 3.5 7.0 7.4 5.3 6.4 7.4 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase 2 RP-C_C PF11800.8 ORF96737 - 6.8 6.7 10.3 12 5.9 10.3 1.4 1 0 0 1 1 1 0 Replication protein C C-terminal region Asp-B-Hydro_N PF05279.11 ORF96737 - 7.1 6.6 24.8 11 6.0 24.8 1.2 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region ALMT PF11744.8 ORF96737 - 7.6 5.2 8.2 10 4.9 8.2 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter PWI PF01480.17 ORF92206 - 1.5e-30 105.3 0.0 2.8e-30 104.4 0.0 1.4 1 0 0 1 1 1 1 PWI domain Atg14 PF10186.9 ORF92206 - 0.015 14.4 1.6 0.028 13.5 1.6 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 UPF0242 PF06785.11 ORF92206 - 3.7 7.6 7.7 0.5 10.4 3.0 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Syntaxin-18_N PF10496.9 ORF88583 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF88583 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF88583 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like S1 PF00575.23 ORF87854 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF87854 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain End_tail_spike PF12219.8 ORF87782 - 0.18 11.8 0.1 0.63 10.1 0.0 1.8 2 0 0 2 2 2 0 Catalytic domain of bacteriophage endosialidase Phytochelatin_C PF09328.10 ORF87764 - 0.039 13.3 0.1 0.051 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) Rad60-SLD PF11976.8 ORF8648 - 1.9e-07 30.8 0.0 3e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 ORF8648 - 0.0049 16.6 0.0 0.0079 15.9 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family S1 PF00575.23 ORF85790 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF85790 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain S1 PF00575.23 ORF85379 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF85379 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain DUF755 PF05501.11 ORF83183 - 0.05 13.9 10.5 0.09 13.1 10.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) SR-25 PF10500.9 ORF83183 - 5.1 6.6 16.8 8.5 5.9 16.8 1.3 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein GAS PF13851.6 ORF76404 - 0.097 12.0 12.8 0.31 10.3 4.5 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Sec34 PF04136.15 ORF76404 - 0.22 11.4 1.9 4.3 7.2 0.0 2.7 1 1 0 2 2 2 0 Sec34-like family DUF4638 PF15472.6 ORF76404 - 0.35 10.6 6.8 0.59 9.8 6.8 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4638) DUF5082 PF16888.5 ORF76404 - 3 8.2 8.0 0.77 10.0 1.7 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) FAM76 PF16046.5 ORF76404 - 4.3 6.6 8.5 2.4 7.5 2.6 2.1 1 1 1 2 2 2 0 FAM76 protein Exo_endo_phos PF03372.23 ORF74917 - 1.4e-05 24.7 0.0 3e-05 23.6 0.0 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Nuclease_act PF08133.11 ORF74115 - 0.14 12.4 0.7 0.35 11.1 0.7 1.7 1 0 0 1 1 1 0 Anticodon nuclease activator family WD40 PF00400.32 ORF7411 - 9e-39 130.8 31.1 1e-05 26.2 0.6 7.2 7 0 0 7 7 7 7 WD domain, G-beta repeat PALB2_WD40 PF16756.5 ORF7411 - 3.2e-08 32.9 18.1 0.00085 18.3 0.4 4.8 1 1 3 5 5 5 4 Partner and localizer of BRCA2 WD40 domain Nup160 PF11715.8 ORF7411 - 1.7e-06 27.0 14.0 0.0039 15.9 0.2 5.4 3 3 2 6 6 6 4 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 ORF7411 - 0.071 11.9 2.0 1.4 7.6 0.2 2.9 1 1 3 4 4 4 0 Nup133 N terminal like ALS_ss_C PF10369.9 ORF7411 - 0.098 12.9 0.0 22 5.3 0.0 3.3 3 2 0 3 3 3 0 Small subunit of acetolactate synthase Rubis-subs-bind PF09273.11 ORF7411 - 0.19 12.4 0.0 4.2 8.1 0.0 2.8 3 2 1 4 4 4 0 Rubisco LSMT substrate-binding Rtt106 PF08512.12 ORF72226 - 3.6e-15 56.2 0.6 5.6e-15 55.5 0.6 1.3 1 0 0 1 1 1 1 Histone chaperone Rttp106-like ATHILA PF03078.15 ORF72226 - 0.31 9.8 8.3 0.44 9.3 8.3 1.2 1 0 0 1 1 1 0 ATHILA ORF-1 family YL1 PF05764.13 ORF72226 - 2 8.5 22.8 0.077 13.1 15.0 2.0 2 0 0 2 2 2 0 YL1 nuclear protein Xan_ur_permease PF00860.20 ORF69115 - 1.9e-23 82.8 5.4 1.9e-23 82.8 5.4 1.5 2 0 0 2 2 2 1 Permease family 7TM_GPCR_Srh PF10318.9 ORF67337 - 0.033 13.2 0.1 0.059 12.4 0.1 1.3 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srh MASE5 PF17178.4 ORF67337 - 0.26 11.1 0.1 0.26 11.1 0.1 2.3 2 1 1 3 3 3 0 Membrane-associated sensor DUF4149 PF13664.6 ORF67337 - 0.34 11.3 5.1 0.12 12.7 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4149) Peptidase_C2 PF00648.21 ORF57672 - 2.2e-28 99.1 1.6 2.8e-28 98.8 1.6 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 ORF57672 - 1.4e-15 57.8 0.1 2.9e-15 56.8 0.0 1.5 2 0 0 2 2 2 1 Calpain large subunit, domain III 2OG-FeII_Oxy_2 PF13532.6 ORF54580 - 9.4e-08 32.5 0.0 4.3e-06 27.1 0.0 2.1 1 1 1 2 2 2 2 2OG-Fe(II) oxygenase superfamily MscS_porin PF12795.7 ORF54580 - 0.19 11.3 0.7 0.27 10.8 0.7 1.2 1 0 0 1 1 1 0 Mechanosensitive ion channel porin domain S1 PF00575.23 ORF53027 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF53027 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain DUF4592 PF15262.6 ORF52723 - 0.25 12.0 5.6 0.25 12.0 3.9 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4592) Fra10Ac1 PF09725.9 ORF47610 - 0.12 12.5 0.1 0.19 11.8 0.1 1.4 1 0 0 1 1 1 0 Folate-sensitive fragile site protein Fra10Ac1 PWI PF01480.17 ORF47356 - 1.5e-30 105.3 0.0 2.8e-30 104.4 0.0 1.4 1 0 0 1 1 1 1 PWI domain Atg14 PF10186.9 ORF47356 - 0.015 14.4 1.6 0.028 13.5 1.6 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 UPF0242 PF06785.11 ORF47356 - 3.7 7.6 7.7 0.5 10.4 3.0 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus zf-RING_2 PF13639.6 ORF45998 - 3.1e-11 43.4 2.6 5.7e-11 42.6 2.6 1.5 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF45998 - 6.1e-09 36.0 4.8 3.5e-08 33.6 4.8 2.1 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF45998 - 1.1e-07 31.6 2.3 2.3e-07 30.5 2.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF45998 - 2.9e-07 30.1 2.4 7.7e-07 28.7 2.4 1.8 1 0 0 1 1 1 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 ORF45998 - 1.2e-06 28.0 0.9 2.2e-06 27.2 0.9 1.4 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 ORF45998 - 1.6e-06 28.0 4.2 3.7e-06 26.9 4.2 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF45998 - 1.9e-06 27.8 0.2 3.3e-06 27.0 0.2 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF45998 - 2.9e-05 23.9 1.2 5.5e-05 23.0 1.2 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF45998 - 7.9e-05 22.4 5.7 0.00037 20.3 5.8 2.0 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF45998 - 0.00016 21.5 1.2 0.00085 19.1 1.4 2.0 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Cytochrom_C_asm PF01578.20 ORF45998 - 0.00017 21.5 0.2 0.00023 21.0 0.2 1.3 1 0 0 1 1 1 1 Cytochrome C assembly protein Prok-RING_4 PF14447.6 ORF45998 - 0.0006 19.6 5.0 0.0031 17.3 0.3 2.4 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 Rtf2 PF04641.12 ORF45998 - 0.0025 17.2 0.2 0.0035 16.8 0.2 1.1 1 0 0 1 1 1 1 Rtf2 RING-finger FANCL_C PF11793.8 ORF45998 - 0.012 15.8 1.6 0.034 14.3 1.6 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain zf-Nse PF11789.8 ORF45998 - 0.021 14.6 2.3 0.075 12.9 2.2 1.9 1 1 1 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit RINGv PF12906.7 ORF45998 - 0.024 14.7 3.5 0.079 13.1 3.5 1.9 1 1 1 2 2 2 0 RING-variant domain Vps39_2 PF10367.9 ORF45998 - 0.12 12.8 0.3 0.22 12.0 0.3 1.4 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 Trypan_PARP PF05887.11 ORF45998 - 0.15 12.0 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) zf-RING-like PF08746.11 ORF45998 - 0.21 12.0 0.3 0.21 12.0 0.3 1.8 2 0 0 2 2 2 0 RING-like domain PalH PF08733.10 ORF45998 - 0.37 9.7 14.6 0.45 9.5 14.6 1.1 1 0 0 1 1 1 0 PalH/RIM21 zf-C3HC4_4 PF15227.6 ORF45998 - 0.53 10.5 8.0 0.078 13.1 2.6 2.4 2 1 0 2 2 1 0 zinc finger of C3HC4-type, RING zinc_ribbon_16 PF17034.5 ORF45998 - 0.78 10.0 3.2 3.7 7.8 0.4 2.3 1 1 1 2 2 2 0 Zinc-ribbon like family DUF4131 PF13567.6 ORF43979 - 0.13 11.9 2.1 0.21 11.2 2.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) CobU PF02283.16 ORF43618 - 0.23 11.0 3.5 0.33 10.5 3.5 1.2 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase DUF4407 PF14362.6 ORF43618 - 0.26 10.6 3.5 0.34 10.2 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FidL_like PF15941.5 ORF43618 - 3.7 8.1 6.1 6.7 7.2 6.1 1.4 1 0 0 1 1 1 0 FidL-like putative membrane protein Pyr_redox_2 PF07992.14 ORF40202 - 4.3e-14 52.5 0.0 5.6e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF40202 - 0.003 18.1 0.1 0.015 15.9 0.0 2.2 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF40202 - 0.019 14.2 0.0 0.15 11.3 0.0 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase PB1 PF00564.24 ORF40038 - 1.5e-07 31.2 0.2 4.3e-07 29.8 0.2 1.7 1 0 0 1 1 1 1 PB1 domain S1 PF00575.23 ORF3453 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF3453 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain AAA PF00004.29 ORF33709 - 1.6e-10 41.5 0.6 1.7e-09 38.2 0.6 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF33709 - 5e-09 36.5 0.0 1e-08 35.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF33709 - 1.2e-07 32.3 0.0 2.7e-07 31.1 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.6 ORF33709 - 3.7e-06 27.3 0.0 8.3e-06 26.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 ORF33709 - 6.1e-05 22.5 0.3 0.14 11.6 0.0 2.2 2 0 0 2 2 2 2 Bacterial TniB protein ATPase PF06745.13 ORF33709 - 0.0021 17.4 2.3 0.33 10.3 0.1 2.5 2 1 1 3 3 3 2 KaiC AAA_30 PF13604.6 ORF33709 - 0.0022 17.7 0.0 0.013 15.3 0.0 2.0 1 1 0 1 1 1 1 AAA domain NB-ARC PF00931.22 ORF33709 - 0.0023 17.2 0.0 0.0049 16.1 0.0 1.5 1 0 0 1 1 1 1 NB-ARC domain DEAD PF00270.29 ORF33709 - 0.0024 17.7 0.1 0.0038 17.0 0.1 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase KAP_NTPase PF07693.14 ORF33709 - 0.0037 16.6 0.1 0.042 13.1 0.1 2.1 1 1 0 1 1 1 1 KAP family P-loop domain NTPase_1 PF03266.15 ORF33709 - 0.0044 16.9 0.0 0.49 10.3 0.0 2.3 2 0 0 2 2 2 1 NTPase DUF2075 PF09848.9 ORF33709 - 0.0045 16.3 0.0 0.008 15.5 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) DUF87 PF01935.17 ORF33709 - 0.0072 16.5 0.3 0.011 15.8 0.3 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain Viral_helicase1 PF01443.18 ORF33709 - 0.0087 15.8 0.0 0.23 11.2 0.0 2.4 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase PIF1 PF05970.14 ORF33709 - 0.013 14.7 0.0 0.098 11.8 0.0 2.1 1 1 1 2 2 2 0 PIF1-like helicase AAA_11 PF13086.6 ORF33709 - 0.014 15.2 0.1 0.03 14.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain Elong_Iki1 PF10483.9 ORF33709 - 0.015 14.8 0.8 0.11 12.0 0.2 2.0 1 1 1 2 2 2 0 Elongator subunit Iki1 RNA_helicase PF00910.22 ORF33709 - 0.02 15.3 1.5 0.81 10.1 0.0 3.1 3 0 0 3 3 3 0 RNA helicase CLP1_P PF16575.5 ORF33709 - 0.03 14.1 0.0 0.081 12.7 0.0 1.7 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Maf PF02545.14 ORF33709 - 0.039 13.8 0.1 0.17 11.7 0.0 1.9 2 0 0 2 2 2 0 Maf-like protein AAA_7 PF12775.7 ORF33709 - 0.056 13.0 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 ORF33709 - 0.056 14.0 0.3 0.11 13.0 0.2 1.7 1 1 0 1 1 1 0 ABC transporter NACHT PF05729.12 ORF33709 - 0.076 12.9 0.1 0.89 9.4 0.1 2.3 1 1 0 1 1 1 0 NACHT domain Helicase_C PF00271.31 ORF3112 - 2.1e-28 98.9 0.1 3e-28 98.4 0.1 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Bax1-I PF01027.20 ORF29109 - 3.7e-28 98.8 39.6 4.3e-28 98.6 39.6 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF29109 - 3.4e-06 26.8 17.9 4.3e-06 26.5 17.9 1.1 1 0 0 1 1 1 1 Bax inhibitor 1 like DUF2070 PF09843.9 ORF29109 - 0.0096 14.3 30.8 0.012 13.9 30.8 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) adh_short PF00106.25 ORF28358 - 8.1e-22 77.6 0.0 1.1e-21 77.1 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF28358 - 2.8e-20 72.9 0.0 6.1e-20 71.8 0.0 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase HSP70 PF00012.20 ORF28358 - 0.11 10.7 0.1 0.15 10.2 0.1 1.1 1 0 0 1 1 1 0 Hsp70 protein ATP-synt_A PF00119.20 ORF28249 - 4.8e-56 190.0 21.6 5.8e-56 189.8 21.6 1.0 1 0 0 1 1 1 1 ATP synthase A chain DUF3333 PF11812.8 ORF28249 - 0.015 15.5 3.4 2 8.6 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3333) CHD5 PF04420.14 ORF28249 - 0.11 12.3 6.1 0.86 9.5 1.6 2.4 2 0 0 2 2 2 0 CHD5-like protein PseudoU_synth_2 PF00849.22 ORF2444 - 1.3e-17 64.4 0.0 1.9e-17 63.8 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase Dynein_C PF18199.1 ORF23485 - 0.0048 16.2 0.8 0.0069 15.6 0.8 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain HSBP1 PF06825.12 ORF23485 - 0.11 12.3 1.3 0.43 10.5 1.3 1.9 1 1 1 2 2 2 0 Heat shock factor binding protein 1 SUKH_6 PF14568.6 ORF23485 - 0.12 12.8 8.9 1.8 9.0 0.2 3.2 2 2 1 3 3 3 0 SMI1-KNR4 cell-wall Lge1 PF11488.8 ORF23485 - 1.2 9.3 6.7 0.43 10.8 1.6 2.8 3 0 0 3 3 3 0 Transcriptional regulatory protein LGE1 LigB PF02900.18 ORF20543 - 2.6e-25 89.0 0.0 3.2e-25 88.7 0.0 1.1 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase NIF PF03031.18 ORF18397 - 1.7e-11 44.1 1.2 2e-11 43.9 0.2 1.7 2 1 1 3 3 3 1 NLI interacting factor-like phosphatase HTH_48 PF17906.1 ORF18397 - 0.018 15.1 0.0 0.047 13.8 0.0 1.6 1 0 0 1 1 1 0 HTH domain in Mos1 transposase SNARE PF05739.19 ORF16043 - 5.2e-10 39.2 0.1 1.5e-09 37.7 0.1 1.7 1 0 0 1 1 1 1 SNARE domain Syntaxin PF00804.25 ORF16043 - 0.014 15.1 15.9 0.03 14.0 15.9 1.5 1 1 0 1 1 1 0 Syntaxin MCPsignal PF00015.21 ORF16043 - 0.94 9.3 9.1 6 6.7 0.9 2.9 2 1 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain S1 PF00575.23 ORF15639 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF15639 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain Syntaxin-18_N PF10496.9 ORF150815 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF150815 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF150815 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like Xan_ur_permease PF00860.20 ORF14597 - 1.9e-23 82.8 5.4 1.9e-23 82.8 5.4 1.5 2 0 0 2 2 2 1 Permease family MORN PF02493.20 ORF145803 - 1.8e-13 49.5 24.8 1.3e-06 27.9 0.7 4.7 4 0 0 4 4 4 4 MORN repeat IclR PF01614.18 ORF145023 - 1.8e-41 141.0 0.0 2.7e-41 140.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial transcriptional regulator HTH_IclR PF09339.10 ORF145023 - 1.8e-12 46.9 0.1 7.1e-12 44.9 0.0 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_5 PF01022.20 ORF145023 - 0.0015 18.3 0.0 0.0045 16.8 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 ORF145023 - 0.0039 17.0 0.1 0.05 13.5 0.0 2.3 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 ORF145023 - 0.0076 15.8 0.0 0.038 13.6 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Bax1-I PF01027.20 ORF144062 - 3.7e-28 98.8 39.6 4.3e-28 98.6 39.6 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 BaxI_1 PF12811.7 ORF144062 - 3.4e-06 26.8 17.9 4.3e-06 26.5 17.9 1.1 1 0 0 1 1 1 1 Bax inhibitor 1 like DUF2070 PF09843.9 ORF144062 - 0.0096 14.3 30.8 0.012 13.9 30.8 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) Dynein_C PF18199.1 ORF139970 - 0.0048 16.2 0.8 0.0069 15.6 0.8 1.2 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain HSBP1 PF06825.12 ORF139970 - 0.11 12.3 1.3 0.43 10.5 1.3 1.9 1 1 1 2 2 2 0 Heat shock factor binding protein 1 SUKH_6 PF14568.6 ORF139970 - 0.12 12.8 8.9 1.8 9.0 0.2 3.2 2 2 1 3 3 3 0 SMI1-KNR4 cell-wall Lge1 PF11488.8 ORF139970 - 1.2 9.3 6.7 0.43 10.8 1.6 2.8 3 0 0 3 3 3 0 Transcriptional regulatory protein LGE1 NAD_binding_10 PF13460.6 ORF139392 - 3.2e-37 128.2 3.6 4.5e-36 124.5 3.6 2.0 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 ORF139392 - 3.8e-12 46.3 0.1 5.8e-12 45.7 0.1 1.3 1 1 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 ORF139392 - 1.7e-08 34.2 0.1 3.2e-08 33.3 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF139392 - 4.9e-07 29.0 0.1 7.4e-07 28.4 0.1 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family KR PF08659.10 ORF139392 - 0.0002 21.4 1.1 0.00043 20.2 1.1 1.5 1 1 0 1 1 1 1 KR domain DapB_N PF01113.20 ORF139392 - 0.0053 16.9 2.2 0.011 15.9 1.7 1.8 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Polysacc_synt_2 PF02719.15 ORF139392 - 0.006 15.8 1.4 0.029 13.5 1.4 2.0 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein PAC2 PF09754.9 ORF139392 - 0.0065 16.5 0.0 0.026 14.6 0.0 1.8 1 1 1 3 3 3 1 PAC2 family RmlD_sub_bind PF04321.17 ORF139392 - 0.016 14.3 1.0 0.61 9.1 1.0 2.6 1 1 0 1 1 1 0 RmlD substrate binding domain DUF755 PF05501.11 ORF138783 - 0.05 13.9 10.5 0.09 13.1 10.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) SR-25 PF10500.9 ORF138783 - 5.1 6.6 16.8 8.5 5.9 16.8 1.3 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein TPH PF13868.6 ORF138699 - 0.16 10.5 36.2 0.0097 14.5 28.9 1.6 1 1 0 1 1 1 0 Trichohyalin-plectin-homology domain Asp-B-Hydro_N PF05279.11 ORF138699 - 1.6 8.8 15.6 2.4 8.2 15.6 1.4 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DnaJ_CXXCXGXG PF00684.19 ORF134665 - 0.03 14.7 0.6 0.1 12.9 0.6 2.0 1 0 0 1 1 1 0 DnaJ central domain CarbpepA_inh PF02977.15 ORF134665 - 0.34 10.7 3.7 0.9 9.4 3.7 1.7 1 0 0 1 1 1 0 Carboxypeptidase A inhibitor Lipoprotein_9 PF03180.14 ORF132105 - 1.5e-101 338.5 3.0 1.7e-101 338.3 3.0 1.0 1 0 0 1 1 1 1 NLPA lipoprotein OpuAC PF04069.12 ORF132105 - 0.00013 21.7 1.3 0.00019 21.1 1.3 1.5 1 1 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Phosphonate-bd PF12974.7 ORF132105 - 0.0034 17.0 0.2 0.014 15.0 0.0 1.8 2 0 0 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.11 ORF132105 - 0.014 15.4 0.1 0.5 10.3 0.0 2.1 2 0 0 2 2 2 0 NMT1/THI5 like cNMP_binding PF00027.29 ORF13112 - 5.9e-15 55.1 0.0 9.2e-15 54.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DUF4407 PF14362.6 ORF13112 - 0.0035 16.8 1.4 0.0047 16.3 1.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) PASTA PF03793.19 ORF13112 - 0.038 13.8 0.2 1.1 9.2 0.0 2.5 2 0 0 2 2 2 0 PASTA domain DEC-1_N PF04625.13 ORF13112 - 0.12 11.4 0.5 0.16 10.9 0.5 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region VraX PF17412.2 ORF130858 - 0.063 12.9 2.4 0.75 9.5 0.1 2.8 3 0 0 3 3 3 0 Family of unknown function Synapsin_N PF10581.9 ORF130858 - 0.066 13.2 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Synapsin N-terminal Syntaxin-18_N PF10496.9 ORF130630 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF130630 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF130630 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like PAP_PilO PF06864.12 ORF12911 - 0.07 11.9 3.9 0.11 11.2 3.9 1.3 1 0 0 1 1 1 0 Pilin accessory protein (PilO) 2OG-FeII_Oxy_3 PF13640.6 ORF127930 - 5.6e-14 52.8 0.0 1.2e-13 51.8 0.0 1.6 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Tubulin PF00091.25 ORF125270 - 0.17 12.1 0.1 0.24 11.5 0.1 1.3 1 0 0 1 1 1 0 Tubulin/FtsZ family, GTPase domain UPF0242 PF06785.11 ORF125010 - 0.087 12.9 0.2 0.17 12.0 0.2 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Ribosomal_L29 PF00831.23 ORF124825 - 0.45 10.5 4.3 0.15 12.1 1.2 1.8 2 0 0 2 2 2 0 Ribosomal L29 protein PHD PF00628.29 ORF123322 - 6.2e-06 26.0 16.6 9.2e-05 22.3 6.4 3.2 3 0 0 3 3 3 2 PHD-finger zf-HC5HC2H PF13771.6 ORF123322 - 0.029 14.6 2.7 0.029 14.6 2.7 3.6 2 1 1 3 3 3 0 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 ORF123322 - 0.34 11.1 20.4 0.2 11.8 1.3 3.3 2 1 1 3 3 3 0 PHD-zinc-finger like domain PHD_4 PF16866.5 ORF123322 - 1.3 9.2 14.7 8.3 6.6 0.5 3.9 2 1 1 3 3 3 0 PHD-finger Macro PF01661.21 ORF1228 - 2.6e-32 111.3 3.5 2.9e-32 111.2 0.1 2.5 1 1 1 3 3 3 1 Macro domain SRP-alpha_N PF04086.13 ORF1228 - 0.12 12.3 12.0 0.16 11.9 12.0 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal DUF4820 PF16091.5 ORF1228 - 0.24 10.7 9.9 0.39 10.0 9.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) DDHD PF02862.17 ORF1228 - 0.33 11.1 3.6 0.41 10.8 3.6 1.2 1 0 0 1 1 1 0 DDHD domain Neur_chan_memb PF02932.16 ORF1228 - 0.5 10.4 2.3 0.58 10.2 2.3 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region GNAT_acetyltr_2 PF13718.6 ORF1228 - 3.5 7.0 7.4 5.3 6.4 7.4 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase 2 RP-C_C PF11800.8 ORF1228 - 6.8 6.7 10.3 12 5.9 10.3 1.4 1 0 0 1 1 1 0 Replication protein C C-terminal region Asp-B-Hydro_N PF05279.11 ORF1228 - 7.1 6.6 24.8 11 6.0 24.8 1.2 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region ALMT PF11744.8 ORF1228 - 7.6 5.2 8.2 10 4.9 8.2 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter MMPL PF03176.15 ORF121320 - 0.075 11.9 0.0 0.099 11.6 0.0 1.1 1 0 0 1 1 1 0 MMPL family SNARE PF05739.19 ORF121017 - 5.2e-10 39.2 0.1 1.5e-09 37.7 0.1 1.7 1 0 0 1 1 1 1 SNARE domain Syntaxin PF00804.25 ORF121017 - 0.014 15.1 15.9 0.03 14.0 15.9 1.5 1 1 0 1 1 1 0 Syntaxin MCPsignal PF00015.21 ORF121017 - 0.94 9.3 9.1 6 6.7 0.9 2.9 2 1 1 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Form_Nir_trans PF01226.17 ORF120986 - 2.9e-76 255.9 28.2 3.2e-76 255.8 28.2 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter Keratin_assoc PF09775.9 ORF120986 - 3.1 7.4 19.7 0.43 10.2 3.6 3.5 2 1 1 3 3 3 0 Keratinocyte-associated protein 2 PARG_cat PF05028.14 ORF119276 - 5.7e-33 114.6 0.0 4e-32 111.8 0.0 1.9 1 1 0 1 1 1 1 Poly (ADP-ribose) glycohydrolase (PARG) S1 PF00575.23 ORF119213 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF119213 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain Pox_L5 PF04872.13 ORF118840 - 0.045 13.6 0.0 0.36 10.8 0.0 2.3 3 0 0 3 3 3 0 Poxvirus L5 protein family Syntaxin-18_N PF10496.9 ORF117618 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF117618 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF117618 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like DUF755 PF05501.11 ORF117040 - 0.05 13.9 10.5 0.09 13.1 10.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) SR-25 PF10500.9 ORF117040 - 5.1 6.6 16.8 8.5 5.9 16.8 1.3 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Syntaxin-18_N PF10496.9 ORF116432 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF116432 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF116432 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like PDEase_I PF00233.19 ORF115625 - 3.8e-58 197.0 3.8 5.2e-58 196.6 3.8 1.2 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase GAS PF13851.6 ORF113223 - 0.79 9.0 11.7 1.3 8.4 11.7 1.3 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding TolA_bind_tri PF16331.5 ORF113223 - 1.7 8.8 11.4 3.3 7.8 0.7 3.3 2 1 1 3 3 3 0 TolA binding protein trimerisation Exonuc_VII_L PF02601.15 ORF113223 - 2.1 7.8 9.0 0.63 9.6 6.0 1.5 2 0 0 2 2 2 0 Exonuclease VII, large subunit Syntaxin-18_N PF10496.9 ORF111366 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF111366 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF111366 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like DUF4131 PF13567.6 ORF110346 - 0.13 11.9 2.1 0.21 11.2 2.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) SLC12 PF03522.15 ORF109335 - 0.87 8.5 3.0 1.2 8.1 3.0 1.3 1 0 0 1 1 1 0 Solute carrier family 12 Zip PF02535.22 ORF10795 - 0.35 10.1 1.8 0.31 10.2 1.8 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 ORF10795 - 4.3 6.0 7.6 5.7 5.6 7.6 1.2 1 0 0 1 1 1 0 Presenilin MORN_2 PF07661.13 ORF10795 - 4.3 7.9 9.5 3.3 8.3 0.9 3.5 3 0 0 3 3 3 0 MORN repeat variant Syntaxin-18_N PF10496.9 ORF107451 - 0.015 15.5 2.7 0.084 13.1 0.0 3.0 3 2 1 4 4 4 0 SNARE-complex protein Syntaxin-18 N-terminus Phage_lysozyme PF00959.19 ORF107451 - 0.022 15.2 0.0 0.048 14.1 0.0 1.6 1 0 0 1 1 1 0 Phage lysozyme Vps5 PF09325.10 ORF107451 - 0.034 13.7 1.8 0.89 9.1 0.1 2.3 2 0 0 2 2 2 0 Vps5 C terminal like Cupin_8 PF13621.6 ORF107232 - 0.13 12.0 5.8 0.2 11.4 5.8 1.3 1 0 0 1 1 1 0 Cupin-like domain A2M PF00207.22 ORF106713 - 0.028 14.3 0.0 0.057 13.3 0.0 1.5 1 0 0 1 1 1 0 Alpha-2-macroglobulin family HAD PF12710.7 ORF106713 - 0.037 14.4 1.1 1.6 9.1 0.0 2.2 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 ORF106713 - 0.07 12.8 0.2 0.11 12.2 0.0 1.5 2 0 0 2 2 2 0 Polynucleotide kinase 3 phosphatase S1 PF00575.23 ORF105718 - 1.1e-25 89.8 14.0 7.5e-13 48.6 0.1 4.0 3 1 0 3 3 3 3 S1 RNA binding domain RNase_II_C_S1 PF18614.1 ORF105718 - 0.14 12.1 4.1 10 6.1 0.1 3.7 3 1 0 3 3 3 0 RNase II-type exonuclease C-terminal S1 domain Peptidase_C3 PF00548.20 ORF100863 - 0.035 14.0 0.3 0.064 13.2 0.3 1.4 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) DUF2655 PF10848.8 NODE_26287_length_809_cov_75.515504_g20553_i0reverse_frame_1 - 0.029 14.7 1.6 0.063 13.6 1.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2655) TCL1_MTCP1 PF01840.17 NODE_26287_length_809_cov_75.515504_g20553_i0reverse_frame_1 - 0.087 12.5 0.0 0.49 10.1 0.0 2.1 3 0 0 3 3 3 0 TCL1/MTCP1 family TGase_elicitor PF16683.5 NODE_26270_length_809_cov_187.325581_g20538_i0forward_frame_1 - 0.21 10.3 0.0 0.46 9.2 0.0 1.5 1 0 0 1 1 1 0 Transglutaminase elicitor DUF1336 PF07059.12 NODE_26204_length_811_cov_86.935567_g20486_i0reverse_frame_2 - 9e-22 78.3 0.0 1.8e-21 77.2 0.0 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1336) DUF4987 PF16377.5 NODE_26204_length_811_cov_86.935567_g20486_i0forward_frame_3 - 0.21 11.7 0.2 0.31 11.2 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function Asp_Arg_Hydrox PF05118.15 NODE_26185_length_811_cov_221.354381_g20468_i0reverse_frame_3 - 3.2e-25 88.8 0.0 1.7e-24 86.5 0.0 1.9 2 0 0 2 2 2 1 Aspartyl/Asparaginyl beta-hydroxylase Cupin_2 PF07883.11 NODE_26185_length_811_cov_221.354381_g20468_i0reverse_frame_3 - 0.052 13.3 0.1 0.13 12.0 0.1 1.6 1 0 0 1 1 1 0 Cupin domain TPR_14 PF13428.6 NODE_26156_length_812_cov_109.227799_g20445_i0forward_frame_2 - 0.047 14.5 0.5 4.6 8.3 0.2 3.1 3 1 0 3 3 3 0 Tetratricopeptide repeat Esterase PF00756.20 ORF9561 - 1.1e-28 100.5 0.0 1.2e-28 100.4 0.0 1.1 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF9561 - 8.6e-07 28.6 0.0 1.6e-06 27.8 0.0 1.4 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF9561 - 2.5e-06 27.0 0.0 3.3e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF9561 - 9.2e-05 23.1 0.1 0.00011 22.9 0.1 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF9561 - 0.00012 21.8 0.0 0.00017 21.4 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold PGAP1 PF07819.13 ORF9561 - 0.00013 21.8 0.0 0.00019 21.2 0.0 1.3 1 0 0 1 1 1 1 PGAP1-like protein Chlorophyllase2 PF12740.7 ORF9561 - 0.013 14.4 0.0 0.02 13.8 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase enzyme DUF2048 PF09752.9 ORF9561 - 0.032 13.3 0.0 0.048 12.7 0.0 1.2 1 0 0 1 1 1 0 Abhydrolase domain containing 18 LIDHydrolase PF10230.9 ORF9561 - 0.13 11.8 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Thioesterase PF00975.20 ORF9561 - 0.13 12.3 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain MORN PF02493.20 ORF92384 - 0.48 10.4 9.5 2.6 8.1 0.1 3.5 4 0 0 4 4 4 0 MORN repeat MORN PF02493.20 ORF9121 - 3.1e-44 146.3 44.8 1e-07 31.4 3.1 7.5 7 0 0 7 7 7 7 MORN repeat Thioredoxin_7 PF13899.6 ORF90863 - 0.064 13.5 0.4 11 6.2 0.2 2.4 2 0 0 2 2 2 0 Thioredoxin-like Syntaxin PF00804.25 ORF90863 - 0.19 11.4 10.7 0.12 12.1 1.5 2.2 2 0 0 2 2 2 0 Syntaxin EccE PF11203.8 ORF90863 - 0.23 11.8 5.8 0.43 10.9 5.8 1.5 1 0 0 1 1 1 0 Putative type VII ESX secretion system translocon, EccE Occludin_ELL PF07303.13 ORF90863 - 0.8 10.5 5.7 6.7 7.5 1.6 2.5 2 0 0 2 2 2 0 Occludin homology domain CENP-F_leu_zip PF10473.9 ORF90863 - 1.4 9.0 21.3 0.39 10.7 4.4 2.8 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Nsp1_C PF05064.13 ORF90863 - 1.9 8.3 8.8 1.6 8.5 0.5 2.3 1 1 1 2 2 2 0 Nsp1-like C-terminal region Rab5-bind PF09311.11 ORF90863 - 3.7 6.8 21.3 1.5 8.2 8.6 2.1 1 1 1 2 2 2 0 Rabaptin-like protein FlaC_arch PF05377.11 ORF90863 - 4.2 7.8 5.3 31 5.0 0.1 3.1 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) DUF1664 PF07889.12 ORF90863 - 5.9 7.0 5.5 16 5.6 0.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF3584 PF12128.8 ORF90863 - 6.8 4.1 19.7 10 3.4 19.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) THOC7 PF05615.13 ORF90863 - 8.3 6.7 22.2 0.77 10.0 4.5 3.1 2 1 1 3 3 3 0 Tho complex subunit 7 Ribosomal_S2 PF00318.20 ORF89187 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF89187 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF89187 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF89187 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF89187 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF89187 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF89187 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF89187 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family FAM24 PF15193.6 ORF88988 - 4.2 8.2 12.2 0.2 12.4 3.2 2.7 2 1 0 2 2 2 0 FAM24 family PPR PF01535.20 ORF87720 - 2.2e-06 27.5 0.3 0.026 14.8 0.0 4.0 4 0 0 4 4 4 1 PPR repeat PPR_2 PF13041.6 ORF87720 - 8.9e-06 25.8 0.1 0.0059 16.8 0.0 3.7 3 1 1 4 4 4 2 PPR repeat family PPR_1 PF12854.7 ORF87720 - 0.0029 17.3 0.0 0.0069 16.1 0.0 1.7 1 0 0 1 1 1 1 PPR repeat PPR_3 PF13812.6 ORF87720 - 0.016 15.3 0.0 0.32 11.1 0.0 2.6 3 0 0 3 3 3 0 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF87720 - 0.072 12.4 0.4 0.14 11.5 0.3 1.6 1 1 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP Ribosomal_S2 PF00318.20 ORF87497 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF87497 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF87497 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF87497 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF87497 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF87497 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF87497 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF87497 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family RabGAP-TBC PF00566.18 ORF85924 - 1e-46 159.3 8.0 1.3e-46 159.0 8.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF2226 PF09987.9 ORF85924 - 0.0085 15.5 0.0 0.012 15.0 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2226) DUF4606 PF15379.6 ORF85924 - 0.046 14.0 0.0 0.078 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4606) MORN PF02493.20 ORF85544 - 4.9e-39 129.9 61.0 1.4e-07 30.9 0.4 9.2 9 0 0 9 9 9 8 MORN repeat AKAP7_NLS PF10469.9 ORF85544 - 0.016 15.1 0.4 0.022 14.7 0.4 1.1 1 0 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain KH_8 PF17903.1 ORF85107 - 7.3e-17 61.2 0.1 1.7e-16 60.1 0.1 1.7 1 0 0 1 1 1 1 Krr1 KH1 domain KH_1 PF00013.29 ORF85107 - 0.00034 20.4 0.2 0.00072 19.3 0.2 1.5 1 0 0 1 1 1 1 KH domain PAC4 PF16093.5 ORF85107 - 0.15 12.2 0.3 0.4 10.9 0.3 1.6 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Calc_CGRP_IAPP PF00214.19 ORF85107 - 4.2 7.8 7.3 46 4.4 7.3 2.2 1 1 0 1 1 1 0 Calcitonin / CGRP / IAPP family Sporozoite_P67 PF05642.11 ORF85025 - 0.19 9.8 0.0 0.24 9.4 0.0 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen SSB PF00436.25 ORF81397 - 2.6e-42 143.1 0.7 3.8e-42 142.6 0.7 1.2 1 0 0 1 1 1 1 Single-strand binding protein family zf-C2H2 PF00096.26 ORF79330 - 1e-06 28.8 30.1 1.9e-06 28.0 4.3 4.5 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF79330 - 1.2e-06 28.9 26.6 6.1e-05 23.5 2.6 4.9 5 0 0 5 5 5 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF79330 - 3.8e-06 27.1 10.1 0.001 19.4 3.4 3.7 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_11 PF16622.5 ORF79330 - 0.0047 16.7 0.6 0.0047 16.7 0.6 3.0 3 0 0 3 3 3 1 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 ORF79330 - 0.035 14.4 4.2 0.11 12.8 4.2 1.9 1 0 0 1 1 1 0 C2H2-type zinc ribbon zf-H2C2_5 PF13909.6 ORF79330 - 0.049 13.4 14.5 1.3 8.8 10.0 3.5 2 1 0 2 2 2 0 C2H2-type zinc-finger domain Rpr2 PF04032.16 ORF79330 - 4 7.8 10.3 0.48 10.7 5.2 2.1 2 1 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain PseudoU_synth_1 PF01416.20 ORF79303 - 1.2e-40 138.3 0.1 2.3e-28 98.8 0.0 2.1 2 0 0 2 2 2 2 tRNA pseudouridine synthase DUF2344 PF10105.9 ORF79303 - 0.15 11.9 0.0 0.21 11.4 0.0 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) Hydrolase PF00702.26 ORF79026 - 3.8e-16 60.0 4.1 1.8e-15 57.8 4.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 ORF79026 - 3.8e-06 26.8 0.8 0.0012 18.7 0.2 2.1 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase EIID-AGA PF03613.14 ORF78735 - 3.5e-90 301.8 4.8 3.9e-90 301.6 4.8 1.0 1 0 0 1 1 1 1 PTS system mannose/fructose/sorbose family IID component Ndc1_Nup PF09531.10 ORF78735 - 2.9 6.5 5.9 3.8 6.1 5.6 1.5 1 1 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Rieske PF00355.26 ORF71424 - 3.6e-11 42.9 0.1 7.1e-11 41.9 0.1 1.5 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain HSP90 PF00183.18 ORF68693 - 4.8e-14 52.2 5.4 6.3e-14 51.8 5.4 1.1 1 0 0 1 1 1 1 Hsp90 protein DUF1272 PF06906.11 ORF68693 - 0.0095 16.0 3.8 0.018 15.1 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) Glyco_hydro_2_C PF02836.17 ORF67510 - 2.7e-11 43.1 0.1 3.6e-11 42.7 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain IPT PF01745.16 ORF67510 - 0.0094 15.4 0.0 0.016 14.6 0.0 1.4 1 1 0 1 1 1 1 Isopentenyl transferase Ribosomal_S2 PF00318.20 ORF62710 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF62710 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF62710 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF62710 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF62710 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF62710 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF62710 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF62710 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family Snf7 PF03357.21 ORF62162 - 1.7e-06 27.8 8.1 2.4e-06 27.3 8.1 1.2 1 0 0 1 1 1 1 Snf7 Pex14_N PF04695.13 ORF62162 - 0.38 11.4 8.7 0.6 10.7 8.7 1.3 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region STIMATE PF12400.8 ORF62031 - 1.9e-14 54.3 11.6 2.6e-14 53.8 11.6 1.2 1 0 0 1 1 1 1 STIMATE family DUF996 PF06195.13 ORF62031 - 1.6 9.0 11.5 2 8.7 10.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF996) Ribosomal_S2 PF00318.20 ORF62018 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF62018 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF62018 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF62018 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF62018 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF62018 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF62018 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF62018 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family zf-H2C2_2 PF13465.6 ORF57577 - 7.2e-08 32.5 6.2 4.1e-05 23.8 1.6 4.0 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF57577 - 5.3e-07 29.9 18.4 0.022 15.6 1.1 4.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2 PF00096.26 ORF57577 - 2.7e-05 24.4 28.6 0.0047 17.3 2.1 4.5 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2HC_2 PF13913.6 ORF57577 - 0.0077 16.1 1.0 0.022 14.7 1.0 1.9 1 0 0 1 1 1 1 zinc-finger of a C2HC-type zf-C2H2_3rep PF18868.1 ORF57577 - 0.038 14.7 0.6 0.038 14.7 0.6 2.4 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats Hexapep PF00132.24 ORF49625 - 3.2e-13 48.8 16.8 4.2e-05 23.1 0.3 4.5 4 1 1 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF49625 - 2.6e-06 27.0 9.6 0.0016 18.1 0.2 4.3 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF49625 - 0.016 14.1 0.7 0.021 13.8 0.7 1.2 1 0 0 1 1 1 0 L-fucokinase Kinesin PF00225.23 ORF4656 - 1.7e-20 73.2 0.0 2.3e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain UPF0093 PF03653.13 ORF44384 - 0.005 17.1 1.4 0.01 16.1 0.8 1.8 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0093) DUF4834 PF16118.5 ORF44384 - 1.2 10.1 0.0 1.2 10.1 0.0 3.7 3 1 0 3 3 3 0 Domain of unknown function (DUF4834) Peptidase_S74 PF13884.6 ORF43467 - 1.8e-12 47.4 0.0 1e-11 45.0 0.0 2.2 1 1 0 1 1 1 1 Chaperone of endosialidase DUF3450 PF11932.8 ORF43467 - 0.029 13.7 1.0 0.046 13.0 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) MORN PF02493.20 ORF41520 - 0.48 10.4 9.5 2.6 8.1 0.1 3.5 4 0 0 4 4 4 0 MORN repeat DUF1415 PF07209.12 ORF39781 - 1.9e-23 83.1 0.0 2.5e-15 56.6 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF1415) Coq4 PF05019.13 ORF35563 - 3.3e-76 255.5 0.0 4.3e-76 255.1 0.0 1.1 1 0 0 1 1 1 1 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 Ribosomal_S2 PF00318.20 ORF35311 - 7.5e-27 94.0 5.3 1.1e-13 51.0 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 NOA36 PF06524.12 ORF35311 - 0.0029 17.0 8.1 0.0044 16.4 8.1 1.2 1 0 0 1 1 1 1 NOA36 protein BUD22 PF09073.10 ORF35311 - 0.071 12.5 7.5 0.089 12.1 7.5 1.1 1 0 0 1 1 1 0 BUD22 RNA_pol_3_Rpc31 PF11705.8 ORF35311 - 0.22 11.8 15.9 0.35 11.1 15.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 DARPP-32 PF05395.12 ORF35311 - 1.5 9.0 14.1 2.4 8.4 14.1 1.2 1 0 0 1 1 1 0 Protein phosphatase inhibitor 1/DARPP-32 DNA_pol_phi PF04931.13 ORF35311 - 2.4 6.2 23.6 3.3 5.7 23.6 1.1 1 0 0 1 1 1 0 DNA polymerase phi Astro_capsid_p PF12226.8 ORF35311 - 4.8 6.2 12.6 7.5 5.6 12.6 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Nop14 PF04147.12 ORF35311 - 7.6 4.6 19.5 9.8 4.2 19.5 1.0 1 0 0 1 1 1 0 Nop14-like family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks74.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks74.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks74.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks74.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:36 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PS-DH PF14765.6 ORF2955 - 1.1e-06 28.1 0.1 1.9e-06 27.4 0.1 1.4 1 0 0 1 1 1 1 Polyketide synthase dehydratase Glyco_hydro_2_C PF02836.17 ORF2675 - 2.7e-11 43.1 0.1 3.6e-11 42.7 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, TIM barrel domain IPT PF01745.16 ORF2675 - 0.0094 15.4 0.0 0.016 14.6 0.0 1.4 1 1 0 1 1 1 1 Isopentenyl transferase HSP90 PF00183.18 ORF26448 - 4.8e-14 52.2 5.4 6.3e-14 51.8 5.4 1.1 1 0 0 1 1 1 1 Hsp90 protein DUF1272 PF06906.11 ORF26448 - 0.0095 16.0 3.8 0.018 15.1 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1272) Atg14 PF10186.9 ORF2517 - 0.038 13.1 0.3 0.075 12.1 0.3 1.5 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 zf-RING_2 PF13639.6 ORF2517 - 0.052 13.9 1.7 0.052 13.9 1.7 2.1 2 0 0 2 2 2 0 Ring finger domain RPGR1_C PF18111.1 ORF2517 - 0.077 12.9 0.1 0.19 11.6 0.1 1.6 1 1 0 1 1 1 0 Retinitis pigmentosa G-protein regulator interacting C-terminal Vps39_2 PF10367.9 ORF2517 - 4.1 7.9 5.5 0.88 10.0 1.2 2.0 2 1 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 NapD PF03927.13 ORF20856 - 1.1e-25 89.4 1.9 2.4e-25 88.4 1.9 1.5 1 0 0 1 1 1 1 NapD protein MpPF26 PF07666.11 ORF152087 - 9.7 6.3 16.6 2.6 8.2 6.8 2.4 2 0 0 2 2 2 0 M penetrans paralogue family 26 DAGAT PF03982.13 ORF149737 - 9e-16 57.6 0.0 3.8e-15 55.6 0.0 1.7 1 1 0 1 1 1 1 Diacylglycerol acyltransferase Pirin PF02678.16 ORF148448 - 1e-37 128.4 0.5 1.6e-37 127.8 0.5 1.3 1 0 0 1 1 1 1 Pirin Pirin_C_2 PF17954.1 ORF148448 - 7.8e-30 102.9 0.8 2.6e-29 101.2 0.4 1.9 2 0 0 2 2 2 1 Quercetinase C-terminal cupin domain Cupin_2 PF07883.11 ORF148448 - 3.5e-07 29.8 0.9 7.6e-07 28.8 0.3 1.9 2 0 0 2 2 2 1 Cupin domain Pirin_C PF05726.13 ORF148448 - 0.0054 17.1 0.0 3 8.3 0.0 2.2 2 0 0 2 2 2 2 Pirin C-terminal cupin domain DUF3412 PF11892.8 ORF148448 - 0.075 13.1 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3412) 2OG-FeII_Oxy PF03171.20 ORF148448 - 0.11 13.0 0.0 1 9.9 0.0 2.4 2 1 0 2 2 2 0 2OG-Fe(II) oxygenase superfamily Laminin_G_3 PF13385.6 ORF145392 - 9.3e-07 29.1 0.1 1.2e-06 28.7 0.1 1.2 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Hydrolase_3 PF08282.12 ORF143683 - 1.8e-67 227.8 0.0 2e-67 227.6 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 ORF143683 - 6.6e-16 58.6 0.0 3.9e-08 33.1 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 ORF143683 - 3.6e-09 37.2 4.5 8.2e-07 29.5 4.5 3.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF143683 - 0.00012 22.2 0.0 0.0019 18.3 0.0 2.4 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 ORF143683 - 0.00098 19.3 0.3 0.023 14.8 0.0 2.7 2 1 1 3 3 3 1 Haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF143683 - 0.0012 19.3 0.8 1.1 9.6 0.0 3.0 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF143683 - 0.016 15.3 0.2 0.11 12.6 0.1 2.2 2 0 0 2 2 2 0 HAD-hyrolase-like ATP-synt_ab PF00006.25 ORF143454 - 1e-49 169.1 0.0 1.7e-49 168.4 0.0 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain AI-2E_transport PF01594.16 ORF142458 - 7.2e-70 235.7 23.0 8e-70 235.6 23.0 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF4577 PF15145.6 ORF142458 - 0.29 11.2 1.5 0.34 10.9 0.4 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4577) PALP PF00291.25 ORF132560 - 1e-24 87.5 0.0 1.1e-24 87.4 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PhoLip_ATPase_C PF16212.5 ORF131996 - 3.8e-71 239.8 24.2 4.3e-71 239.6 24.2 1.0 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Sporozoite_P67 PF05642.11 ORF13006 - 0.19 9.8 0.0 0.24 9.4 0.0 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen CNOT1_TTP_bind PF16417.5 ORF127222 - 0.16 11.2 0.0 0.34 10.1 0.0 1.5 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 TTP binding domain Pkinase PF00069.25 ORF122852 - 1.6e-61 208.0 4.1 1.9e-61 207.7 4.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF122852 - 6.5e-35 120.6 1.0 8.3e-35 120.3 1.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF122852 - 1.6e-07 30.4 0.0 2.3e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF122852 - 7.5e-06 25.5 0.0 1.3e-05 24.7 0.0 1.4 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF122852 - 3.1e-05 24.0 0.1 5.2e-05 23.3 0.1 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF122852 - 0.00031 19.8 1.7 0.00044 19.3 1.7 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF122852 - 0.00042 19.7 0.5 0.0006 19.2 0.5 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family 5_nucleotid PF05761.14 ORF122852 - 0.0011 18.0 0.5 0.0015 17.5 0.5 1.1 1 0 0 1 1 1 1 5' nucleotidase family Choline_kinase PF01633.20 ORF122852 - 0.0084 15.7 2.4 0.015 14.9 2.0 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase HYR PF02494.16 ORF115502 - 1.8e-17 63.4 11.3 1.8e-06 28.2 0.1 3.3 3 0 0 3 3 3 3 HYR domain Coiled PF05710.12 ORF115502 - 0.37 11.7 2.9 27 5.7 0.0 3.2 3 0 0 3 3 3 0 Coiled coil Big_7 PF17957.1 ORF115502 - 6.6 7.6 7.3 1.4e+02 3.3 3.6 3.4 2 1 0 2 2 2 0 Bacterial Ig domain Jnk-SapK_ap_N PF09744.9 ORF114836 - 2.1 8.5 45.0 0.25 11.6 19.3 3.1 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 MecA_N PF05223.11 ORF114836 - 4.8 7.5 13.0 0.37 11.1 6.7 2.4 2 2 1 3 3 3 0 NTF2-like N-terminal transpeptidase domain DUF725 PF05267.12 ORF114836 - 5 7.1 11.5 0.22 11.5 2.4 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF725) FH2 PF02181.23 ORF114836 - 6.2 5.8 28.9 0.017 14.2 7.7 2.3 1 1 1 2 2 2 0 Formin Homology 2 Domain Lebercilin PF15619.6 ORF114836 - 7.4 6.2 46.0 0.87 9.2 10.3 2.6 1 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF1664 PF07889.12 ORF114836 - 8.5 6.4 27.2 0.071 13.2 5.0 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) HECW_N PF16562.5 ORF112546 - 0.21 11.4 1.2 0.52 10.1 1.2 1.6 1 1 0 1 1 1 0 N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2 MORN PF02493.20 ORF10996 - 7e-40 132.6 70.1 5.6e-07 29.1 3.9 8.6 9 0 0 9 9 9 7 MORN repeat Leu_zip PF15294.6 ORF101359 - 3e-16 59.8 33.5 1.1e-11 44.8 19.0 2.0 1 1 1 2 2 2 2 Leucine zipper PKcGMP_CC PF16808.5 ORF101359 - 0.015 15.2 1.1 0.015 15.2 1.1 4.1 4 1 1 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF4070 PF13282.6 ORF101359 - 0.066 13.3 2.8 0.12 12.4 0.2 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4070) DUF1319 PF07028.11 ORF101359 - 0.16 12.2 15.5 0.26 11.5 0.1 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1319) Cep57_CLD_2 PF14197.6 ORF101359 - 0.75 9.9 12.2 0.62 10.2 3.1 3.7 2 2 0 2 2 2 0 Centrosome localisation domain of PPC89 DUF1664 PF07889.12 ORF101359 - 2.6 8.1 17.7 0.055 13.5 3.3 3.4 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 ORF101359 - 2.9 8.1 25.0 0.91 9.7 7.3 3.1 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Bestrophin PF01062.21 ORF10000 - 0.0001 21.8 0.0 0.00015 21.3 0.0 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel RskA PF10099.9 ORF10000 - 0.065 13.5 2.0 0.17 12.2 0.0 2.1 2 0 0 2 2 2 0 Anti-sigma-K factor rskA DUSP PF06337.12 NODE_26453_length_805_cov_60.597403_g20693_i0reverse_frame_1 - 1.4e-13 51.2 3.3 1.7e-13 51.0 1.6 2.0 2 0 0 2 2 2 1 DUSP domain LytTR PF04397.15 NODE_26451_length_805_cov_65.410390_g20691_i0reverse_frame_1 - 0.22 11.7 1.4 1.9 8.8 0.5 2.3 1 1 1 2 2 2 0 LytTr DNA-binding domain GCM PF03615.15 NODE_26428_length_805_cov_270.716883_g20670_i0forward_frame_1 - 0.22 11.4 5.2 0.2 11.5 4.2 1.5 1 1 0 1 1 1 0 GCM motif protein ABA_GPCR PF12430.8 NODE_26388_length_806_cov_300.797665_g20636_i0reverse_frame_1 - 7.2e-26 91.0 10.9 9.1e-26 90.7 10.9 1.1 1 0 0 1 1 1 1 Abscisic acid G-protein coupled receptor Flagellin_C PF00700.21 NODE_26388_length_806_cov_300.797665_g20636_i0forward_frame_1 - 0.032 14.6 0.1 0.064 13.6 0.1 1.4 1 0 0 1 1 1 0 Bacterial flagellin C-terminal helical region cobW PF02492.19 NODE_26376_length_806_cov_2086.027237_g20626_i0reverse_frame_1 - 6e-47 159.5 0.9 7.7e-47 159.2 0.9 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 NODE_26376_length_806_cov_2086.027237_g20626_i0reverse_frame_1 - 0.00058 19.7 0.0 0.00093 19.1 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain GTP_EFTU PF00009.27 NODE_26376_length_806_cov_2086.027237_g20626_i0reverse_frame_1 - 0.0018 17.8 0.4 0.14 11.7 0.2 2.2 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 NODE_26376_length_806_cov_2086.027237_g20626_i0reverse_frame_1 - 0.016 15.2 0.1 0.58 10.0 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase GSAP-16 PF14959.6 NODE_26376_length_806_cov_2086.027237_g20626_i0forward_frame_1 - 0.073 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 gamma-Secretase-activating protein C-term Strumpellin PF10266.9 NODE_26297_length_809_cov_3.139535_g20562_i0forward_frame_2 - 2.2e-94 317.1 5.4 2.5e-94 317.0 5.4 1.0 1 0 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin MIP-T3_C PF17749.1 NODE_26297_length_809_cov_3.139535_g20562_i0forward_frame_2 - 0.025 14.6 0.3 0.32 10.9 0.0 2.3 1 1 1 2 2 2 0 Microtubule-binding protein MIP-T3 C-terminal region IL31 PF15209.6 NODE_26297_length_809_cov_3.139535_g20562_i0forward_frame_2 - 0.077 12.8 0.4 1.2 8.9 0.1 2.4 2 0 0 2 2 2 0 Interleukin 31 Takusan PF04822.13 NODE_26290_length_809_cov_65.342377_g20556_i0reverse_frame_3 - 0.16 11.9 0.3 0.27 11.2 0.3 1.3 1 0 0 1 1 1 0 Takusan Ca_chan_IQ PF08763.11 NODE_26287_length_809_cov_75.515504_g20553_i0reverse_frame_3 - 0.17 12.1 0.0 2.5 8.4 0.0 2.3 2 0 0 2 2 2 0 Voltage gated calcium channel IQ domain DUF116 PF01976.17 NODE_26287_length_809_cov_75.515504_g20553_i0forward_frame_2 - 0.0034 16.9 2.0 0.0082 15.7 2.0 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF116 ACPS PF01648.20 NODE_26277_length_809_cov_146.607235_g4884_i2forward_frame_2 - 0.099 12.8 0.1 0.17 12.0 0.1 1.4 1 0 0 1 1 1 0 4'-phosphopantetheinyl transferase superfamily DUF4527 PF15030.6 NODE_26269_length_809_cov_264.160207_g18921_i1reverse_frame_3 - 0.016 14.7 0.5 0.022 14.2 0.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) MS_channel PF00924.18 NODE_26268_length_809_cov_279.118863_g20537_i0reverse_frame_2 - 6.7e-21 74.8 0.0 8.8e-21 74.4 0.0 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel MFS_1 PF07690.16 NODE_26249_length_810_cov_2.771613_g20523_i0forward_frame_2 - 2.1e-07 30.2 4.6 2.6e-07 29.9 4.4 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily TRI12 PF06609.13 NODE_26249_length_810_cov_2.771613_g20523_i0forward_frame_2 - 0.002 16.6 0.1 0.0027 16.2 0.1 1.1 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) AtpR PF12966.7 NODE_26249_length_810_cov_2.771613_g20523_i0forward_frame_2 - 1.4 9.4 8.0 0.17 12.4 3.6 1.7 2 0 0 2 2 2 0 N-ATPase, AtpR subunit HSP33 PF01430.19 NODE_26245_length_810_cov_51.094194_g20519_i0reverse_frame_2 - 0.029 13.8 1.0 0.92 8.9 0.1 2.2 1 1 1 2 2 2 0 Hsp33 protein Ank PF00023.30 ORF99233 - 9.8e-16 57.4 3.6 4.8e-05 23.6 0.1 5.5 5 0 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 ORF99233 - 3.7e-14 51.4 0.7 0.049 14.2 0.0 5.4 5 0 0 5 5 5 4 Ankyrin repeat Ank_2 PF12796.7 ORF99233 - 4.5e-14 52.8 0.0 1.3e-05 25.7 0.0 3.2 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF99233 - 3.1e-11 43.6 0.8 0.043 14.4 0.0 5.5 3 2 3 6 6 6 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF99233 - 0.00087 19.5 1.0 2.4 8.6 0.0 4.1 3 1 0 3 3 3 1 Ankyrin repeats (many copies) AAA_lid_7 PF17867.1 ORF9719 - 0.019 15.2 1.7 0.053 13.7 1.7 1.8 1 1 0 1 1 1 0 Midasin AAA lid domain Molybdop_Fe4S4 PF04879.16 ORF9548 - 6.9 6.7 6.9 15 5.6 0.3 2.8 3 0 0 3 3 3 0 Molybdopterin oxidoreductase Fe4S4 domain EF-hand_5 PF13202.6 ORF93370 - 0.00059 19.2 0.0 0.0013 18.1 0.0 1.5 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 ORF93370 - 0.00065 19.1 0.1 0.0013 18.1 0.1 1.5 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 ORF93370 - 0.0014 18.4 0.0 0.0034 17.2 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 ORF93370 - 0.0045 17.4 0.1 0.01 16.3 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF93370 - 0.0053 16.6 0.1 0.012 15.4 0.1 1.6 1 0 0 1 1 1 1 EF-hand domain pair DUF3337 PF11816.8 ORF93370 - 0.11 12.3 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3337) Sel1 PF08238.12 ORF89534 - 6.6e-12 45.7 9.5 2.6e-07 31.1 1.3 3.6 4 0 0 4 4 4 2 Sel1 repeat Armet PF10208.9 ORF89534 - 0.027 14.4 0.0 0.045 13.7 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding AAA_lid_7 PF17867.1 ORF88349 - 0.019 15.2 1.7 0.053 13.7 1.7 1.8 1 1 0 1 1 1 0 Midasin AAA lid domain DNA_ligase_A_C PF04679.15 ORF84429 - 6.3e-16 58.8 0.0 1.9e-09 38.0 0.0 2.4 1 1 0 2 2 2 2 ATP dependent DNA ligase C terminal region DUF2457 PF10446.9 ORF84429 - 0.018 14.2 5.3 0.027 13.6 5.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DNA_pol_phi PF04931.13 ORF84429 - 6.4 4.8 5.6 9.5 4.2 5.6 1.2 1 0 0 1 1 1 0 DNA polymerase phi DUF2951 PF11166.8 ORF78899 - 0.0036 17.5 0.5 0.0093 16.2 0.5 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2951) HAD PF12710.7 ORF78277 - 4.8e-15 56.4 0.0 7e-15 55.9 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF78277 - 1.2e-12 48.5 0.1 2.2e-12 47.7 0.1 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 ORF78277 - 6e-09 35.7 0.0 1.1e-08 34.8 0.0 1.3 1 1 0 1 1 1 1 Putative Phosphatase Acid_phosphat_B PF03767.14 ORF78277 - 9.5e-05 22.1 0.1 0.01 15.4 0.0 2.2 2 0 0 2 2 2 2 HAD superfamily, subfamily IIIB (Acid phosphatase) Hydrolase_3 PF08282.12 ORF78277 - 0.096 12.4 0.1 0.51 10.0 0.0 2.2 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase PFK PF00365.20 ORF78277 - 0.13 11.5 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphofructokinase TRP PF06011.12 ORF78074 - 0.0004 19.2 8.8 0.00087 18.1 8.8 1.6 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel TMEM52 PF14979.6 ORF78074 - 0.015 15.2 1.4 0.02 14.8 0.0 2.0 2 0 0 2 2 2 0 Transmembrane 52 Ni_hydr_CYTB PF01292.20 ORF78074 - 0.3 10.7 1.8 7.1 6.2 0.2 2.1 2 0 0 2 2 2 0 Prokaryotic cytochrome b561 EXS PF03124.14 ORF78074 - 1.4 8.1 5.4 2.9 7.1 3.9 1.8 1 1 1 2 2 2 0 EXS family ubiquitin PF00240.23 ORF76181 - 8.5e-05 22.2 0.1 0.0002 21.0 0.1 1.7 1 0 0 1 1 1 1 Ubiquitin family Na_Ca_ex_C PF16494.5 ORF65622 - 3 8.3 8.3 2.6 8.5 4.4 2.2 2 0 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain S-AdoMet_synt_M PF02772.16 ORF62815 - 2 8.7 8.9 1.7 8.9 6.6 1.8 1 1 1 2 2 2 0 S-adenosylmethionine synthetase, central domain N_BRCA1_IG PF16158.5 ORF59084 - 6.4e-07 30.0 0.0 3.3e-06 27.8 0.0 2.1 1 1 1 2 2 2 1 Ig-like domain from next to BRCA1 gene IclR PF01614.18 ORF57538 - 2e-12 47.0 0.0 2.9e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 Bacterial transcriptional regulator GAF PF01590.26 ORF57538 - 0.00014 22.5 0.1 0.00031 21.4 0.0 1.6 2 0 0 2 2 2 1 GAF domain GAF_2 PF13185.6 ORF57538 - 0.00017 21.9 0.0 0.00028 21.2 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 ORF57538 - 0.007 16.7 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 GAF domain GNAT_C PF18164.1 ORF55300 - 0.044 13.5 0.4 0.078 12.7 0.4 1.3 1 0 0 1 1 1 0 GNAT-like C-terminal domain MORN PF02493.20 ORF54843 - 6.4e-53 173.6 66.8 5.4e-08 32.3 1.4 10.9 10 1 0 10 10 10 10 MORN repeat Ig_mannosidase PF17753.1 ORF54843 - 0.3 10.9 0.6 6.4 6.6 0.0 2.7 3 0 0 3 3 3 0 Ig-fold domain peroxidase PF00141.23 ORF54145 - 4.3e-16 59.3 0.0 3.1e-15 56.5 0.0 1.9 1 1 0 1 1 1 1 Peroxidase PCNA_C PF02747.15 ORF51895 - 6.8e-42 142.7 0.0 9.6e-38 129.3 0.0 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 ORF51895 - 3.4e-39 133.4 1.9 5.9e-39 132.7 1.9 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF51895 - 0.00023 20.7 0.1 0.00031 20.3 0.1 1.2 1 0 0 1 1 1 1 Rad9 NAD_binding_4 PF07993.12 ORF51895 - 0.2 10.8 0.0 0.87 8.7 0.0 1.8 1 1 0 2 2 2 0 Male sterility protein RRM_1 PF00076.22 ORF51227 - 8.7e-10 38.3 0.1 3.1e-07 30.1 0.0 2.5 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF51227 - 0.00035 20.2 0.1 0.0078 15.8 0.0 2.2 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RL PF17797.1 ORF51227 - 0.0029 17.5 0.2 0.032 14.2 0.1 2.3 2 0 0 2 2 2 1 RL domain RRM_3 PF08777.11 ORF51227 - 0.018 15.1 0.1 8.3 6.5 0.0 2.3 2 0 0 2 2 2 0 RNA binding motif Jak1_Phl PF17887.1 ORF51227 - 0.079 12.9 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Jak1 pleckstrin homology-like domain CobU PF02283.16 ORF47552 - 0.23 11.0 3.5 0.33 10.5 3.5 1.2 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase DUF4407 PF14362.6 ORF47552 - 0.26 10.6 3.5 0.34 10.2 3.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FidL_like PF15941.5 ORF47552 - 3.6 8.1 6.1 6.6 7.3 6.1 1.4 1 0 0 1 1 1 0 FidL-like putative membrane protein Cytochrom_C550 PF14495.6 ORF47273 - 0.042 13.6 0.1 0.087 12.5 0.1 1.5 1 0 0 1 1 1 0 Cytochrome c-550 domain MORN PF02493.20 ORF40572 - 6.4e-53 173.6 66.8 5.4e-08 32.3 1.4 10.9 10 1 0 10 10 10 10 MORN repeat Ig_mannosidase PF17753.1 ORF40572 - 0.3 10.9 0.6 6.4 6.6 0.0 2.7 3 0 0 3 3 3 0 Ig-fold domain Tcell_CD4_C PF12104.8 ORF37335 - 0.052 13.5 1.2 0.089 12.7 0.1 1.9 2 0 0 2 2 2 0 T cell CD4 receptor C terminal region Ribosomal_L2_C PF03947.18 ORF37276 - 3.3e-12 46.7 0.0 6e-12 45.9 0.0 1.4 1 1 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Peptidase_M22 PF00814.25 ORF34910 - 1.1e-64 218.8 0.0 1.3e-64 218.6 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 ORF34910 - 0.036 13.7 0.0 0.062 13.0 0.0 1.3 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus MORN PF02493.20 ORF33890 - 6.4e-53 173.6 66.8 5.4e-08 32.3 1.4 10.9 10 1 0 10 10 10 10 MORN repeat Ig_mannosidase PF17753.1 ORF33890 - 0.3 10.9 0.6 6.4 6.6 0.0 2.7 3 0 0 3 3 3 0 Ig-fold domain ALC PF17527.2 ORF26400 - 0.05 13.2 1.2 0.086 12.5 0.4 1.7 2 0 0 2 2 2 0 Phage ALC protein ASFV_L11L PF05293.11 ORF25132 - 0.1 12.9 0.4 0.19 12.1 0.4 1.3 1 0 0 1 1 1 0 African swine fever virus (ASFV) L11L protein MORN PF02493.20 ORF25 - 6.4e-53 173.6 66.8 5.4e-08 32.3 1.4 10.9 10 1 0 10 10 10 10 MORN repeat Ig_mannosidase PF17753.1 ORF25 - 0.27 11.0 0.6 6.4 6.6 0.0 2.8 3 0 0 3 3 3 0 Ig-fold domain TerD PF02342.18 ORF23888 - 2.4e-38 131.5 0.0 3.3e-38 131.1 0.0 1.1 1 0 0 1 1 1 1 TerD domain DUF4777 PF16007.5 ORF23888 - 0.1 12.9 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) DUF4013 PF13197.6 ORF22933 - 0.0096 15.8 5.2 0.0096 15.8 5.2 1.8 2 1 0 2 2 2 1 Protein of unknown function (DUF4013) 2OG-FeII_Oxy_3 PF13640.6 ORF18407 - 1.2e-17 64.5 0.0 2e-17 63.9 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF18407 - 1.3e-10 41.8 0.0 2.3e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily MIT PF04212.18 ORF16999 - 8.2e-05 22.6 0.5 0.0002 21.4 0.5 1.6 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain HAD PF12710.7 ORF15545 - 4.8e-15 56.4 0.0 7e-15 55.9 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF15545 - 1.2e-12 48.5 0.1 2.2e-12 47.7 0.1 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 ORF15545 - 6e-09 35.7 0.0 1.1e-08 34.8 0.0 1.3 1 1 0 1 1 1 1 Putative Phosphatase Acid_phosphat_B PF03767.14 ORF15545 - 9.5e-05 22.1 0.1 0.01 15.4 0.0 2.2 2 0 0 2 2 2 2 HAD superfamily, subfamily IIIB (Acid phosphatase) Hydrolase_3 PF08282.12 ORF15545 - 0.096 12.4 0.1 0.51 10.0 0.0 2.2 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase PFK PF00365.20 ORF15545 - 0.13 11.5 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 Phosphofructokinase Globin PF00042.22 ORF15424 - 3.8e-10 40.3 0.0 4.6e-09 36.8 0.0 2.2 1 1 0 1 1 1 1 Globin SAM_1 PF00536.30 ORF15424 - 0.14 12.6 1.8 0.22 12.0 0.9 1.8 2 0 0 2 2 2 0 SAM domain (Sterile alpha motif) UPF0254 PF06787.11 ORF151767 - 0.053 13.3 0.2 0.19 11.5 0.2 2.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0254) S1-P1_nuclease PF02265.16 ORF148604 - 3.8e-47 161.2 0.3 5e-47 160.9 0.3 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease Pox_C4_C10 PF03336.13 ORF148604 - 0.043 12.9 1.8 0.45 9.6 0.1 2.3 2 1 0 2 2 2 0 Poxvirus C4/C10 protein DUF1633 PF07794.11 ORF147689 - 0.26 9.4 0.4 0.35 9.0 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1633) Peptidase_M22 PF00814.25 ORF145145 - 1.1e-64 218.8 0.0 1.3e-64 218.6 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 ORF145145 - 0.036 13.7 0.0 0.062 13.0 0.0 1.3 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus LRR_6 PF13516.6 ORF144776 - 1.4e-12 46.5 14.6 0.034 14.2 0.2 7.4 7 1 0 7 7 7 6 Leucine Rich repeat Abhydrolase_1 PF00561.20 ORF142945 - 8.2e-23 81.3 0.0 1.4e-22 80.6 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF142945 - 1.2e-14 54.2 0.0 1.5e-14 53.8 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF142945 - 6.6e-13 49.8 0.0 8.3e-13 49.5 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 ORF142945 - 3.4e-05 22.7 0.0 5.1e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Ndr family LIDHydrolase PF10230.9 ORF142945 - 0.00044 19.9 0.0 0.00064 19.4 0.0 1.2 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Esterase PF00756.20 ORF142945 - 0.00056 19.6 0.0 0.00086 19.0 0.0 1.3 1 0 0 1 1 1 1 Putative esterase Abhydrolase_5 PF12695.7 ORF142945 - 0.0012 18.6 0.0 0.0019 18.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF915 PF06028.11 ORF142945 - 0.0014 18.0 0.1 0.013 14.9 0.0 2.2 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) PGAP1 PF07819.13 ORF142945 - 0.0016 18.2 0.0 0.0029 17.4 0.0 1.4 1 0 0 1 1 1 1 PGAP1-like protein Chlorophyllase2 PF12740.7 ORF142945 - 0.0047 15.9 0.0 0.0075 15.2 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_2 PF02230.16 ORF142945 - 0.015 15.1 0.0 0.27 11.0 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase UPF0227 PF05728.12 ORF142945 - 0.027 14.4 0.2 0.057 13.4 0.2 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0227) IpaB_EvcA PF03278.13 ORF142945 - 0.042 13.6 0.0 0.085 12.6 0.0 1.5 1 0 0 1 1 1 0 IpaB/EvcA family Ser_hydrolase PF06821.13 ORF142945 - 0.055 13.3 0.0 0.087 12.7 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase Abhydrolase_3 PF07859.13 ORF142945 - 0.11 12.4 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Lipase_3 PF01764.25 ORF142945 - 0.13 12.1 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) Lactamase_B PF00753.27 ORF141505 - 4.9e-10 39.7 0.2 7.8e-10 39.1 0.2 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily MORN PF02493.20 ORF139479 - 6.4e-53 173.6 66.8 5.4e-08 32.3 1.4 10.9 10 1 0 10 10 10 10 MORN repeat Ig_mannosidase PF17753.1 ORF139479 - 0.3 10.9 0.6 6.4 6.6 0.0 2.7 3 0 0 3 3 3 0 Ig-fold domain DUF4013 PF13197.6 ORF137533 - 0.0096 15.8 5.2 0.0096 15.8 5.2 1.8 2 1 0 2 2 2 1 Protein of unknown function (DUF4013) Abhydrolase_1 PF00561.20 ORF135954 - 1.3e-19 70.8 0.0 2.2e-19 70.1 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF135954 - 1.6e-13 50.5 0.0 2e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF135954 - 2.1e-11 44.8 0.0 2.7e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 ORF135954 - 0.00019 20.2 0.0 0.00029 19.6 0.0 1.3 1 0 0 1 1 1 1 Ndr family Esterase PF00756.20 ORF135954 - 0.00034 20.4 0.0 0.00051 19.8 0.0 1.3 1 0 0 1 1 1 1 Putative esterase LIDHydrolase PF10230.9 ORF135954 - 0.0016 18.1 0.0 0.0023 17.5 0.0 1.2 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase PGAP1 PF07819.13 ORF135954 - 0.0047 16.7 0.0 0.0082 15.9 0.0 1.3 1 0 0 1 1 1 1 PGAP1-like protein DUF915 PF06028.11 ORF135954 - 0.0082 15.5 0.1 0.02 14.2 0.0 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) Chlorophyllase2 PF12740.7 ORF135954 - 0.0094 14.9 0.0 0.016 14.1 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_5 PF12695.7 ORF135954 - 0.0098 15.7 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIFR_D2 PF17971.1 ORF135954 - 0.062 13.5 0.2 0.12 12.5 0.2 1.5 1 0 0 1 1 1 0 Leukemia inhibitory factor receptor D2 domain Peptidase_S9 PF00326.21 ORF135954 - 0.12 11.8 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family Crisp PF08562.10 ORF135942 - 0.44 11.2 3.0 0.34 11.5 0.6 1.9 2 0 0 2 2 2 0 Crisp EF-hand_1 PF00036.32 ORF135703 - 2e-25 86.4 18.5 4.3e-07 29.0 0.1 6.0 6 1 0 6 6 6 5 EF hand EF-hand_6 PF13405.6 ORF135703 - 3.6e-22 76.4 14.4 0.00012 21.7 0.1 5.8 5 1 0 5 5 5 5 EF-hand domain EF-hand_7 PF13499.6 ORF135703 - 4.1e-20 72.0 13.9 3.8e-09 36.9 0.9 3.4 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF135703 - 2.8e-13 48.7 15.6 0.0004 19.8 0.0 5.7 5 0 0 5 5 5 5 EF hand EF-hand_8 PF13833.6 ORF135703 - 5.2e-11 42.2 13.2 4.4e-06 26.4 0.2 5.2 4 1 1 5 5 5 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF135703 - 0.00022 21.5 0.9 0.12 12.7 0.0 3.4 3 1 0 3 3 3 1 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF135703 - 0.0052 16.7 5.2 0.62 10.0 0.0 4.1 3 2 1 4 4 4 1 Caleosin related protein EF-hand_4 PF12763.7 ORF135703 - 0.026 14.5 2.1 0.21 11.5 0.1 2.6 2 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 ORF135703 - 0.44 10.8 3.7 0.5 10.6 0.0 2.8 4 0 0 4 4 4 0 Dockerin type I domain DUF2614 PF11023.8 ORF130560 - 6.2 7.0 7.8 2.1 8.5 0.5 2.5 2 1 0 2 2 2 0 Zinc-ribbon containing domain PX PF00787.24 ORF129580 - 4.9e-07 29.7 1.6 7.2e-07 29.2 0.1 2.1 3 0 0 3 3 3 1 PX domain Spore_II_R PF09551.10 ORF129580 - 0.069 13.6 0.6 0.069 13.6 0.6 2.2 2 0 0 2 2 2 0 Stage II sporulation protein R (spore_II_R) TSC22 PF01166.18 ORF128438 - 0.043 14.1 0.1 0.088 13.1 0.1 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family PCNA_C PF02747.15 ORF127449 - 6.8e-42 142.7 0.0 9.6e-38 129.3 0.0 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 ORF127449 - 3.4e-39 133.4 1.9 5.9e-39 132.7 1.9 1.2 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF127449 - 0.00023 20.7 0.1 0.00031 20.3 0.1 1.2 1 0 0 1 1 1 1 Rad9 NAD_binding_4 PF07993.12 ORF127449 - 0.2 10.8 0.0 0.87 8.7 0.0 1.8 1 1 0 2 2 2 0 Male sterility protein Adenine_glyco PF03352.13 ORF127106 - 9.9e-82 273.0 0.0 1.2e-81 272.7 0.0 1.1 1 0 0 1 1 1 1 Methyladenine glycosylase RBD PF02196.15 ORF127106 - 0.084 13.0 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Raf-like Ras-binding domain UQ_con PF00179.26 ORF124901 - 1.6e-07 31.1 0.0 2.4e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 ORF124901 - 0.19 11.5 0.0 0.31 10.7 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family B Methyltransf_11 PF08241.12 ORF122678 - 7.8e-19 68.1 0.0 1.6e-18 67.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF122678 - 2.6e-16 60.1 0.0 4.6e-16 59.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF122678 - 1.6e-14 53.8 0.0 2.4e-14 53.2 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 ORF122678 - 5.1e-13 49.1 0.0 7.9e-13 48.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF122678 - 1e-09 39.0 0.0 2.1e-09 38.0 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF122678 - 1.8e-09 37.7 0.0 2.6e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 ORF122678 - 1.4e-05 25.1 0.0 0.014 15.3 0.0 2.1 2 0 0 2 2 2 2 Hypothetical methyltransferase Methyltransf_4 PF02390.17 ORF122678 - 0.0018 17.8 0.0 0.012 15.1 0.0 2.1 1 1 0 1 1 1 1 Putative methyltransferase MetW PF07021.12 ORF122678 - 0.0019 17.8 0.0 0.0056 16.3 0.0 1.7 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.14 ORF122678 - 0.01 15.4 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Pox_MCEL PF03291.16 ORF122678 - 0.19 10.8 0.0 1.6 7.8 0.0 1.9 1 1 0 1 1 1 0 mRNA capping enzyme B-block_TFIIIC PF04182.12 ORF12192 - 0.14 12.3 0.0 0.25 11.5 0.0 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC DUF3984 PF13136.6 ORF120238 - 0.19 11.1 5.0 0.21 11.0 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3984) YbjQ_1 PF01906.17 ORF118468 - 3.3e-39 133.7 0.7 4.4e-39 133.3 0.7 1.2 1 0 0 1 1 1 1 Putative heavy-metal-binding Na_Ca_ex_C PF16494.5 ORF11571 - 3 8.3 8.3 2.6 8.5 4.4 2.2 2 0 0 2 2 2 0 C-terminal extension of sodium/calcium exchanger domain p25-alpha PF05517.12 ORF114371 - 0.056 13.6 0.2 0.056 13.6 0.2 2.9 3 1 1 4 4 4 0 p25-alpha MbtH PF03621.13 ORF114371 - 0.13 11.8 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 MbtH-like protein Med3 PF11593.8 ORF113917 - 0.00092 18.5 12.1 0.0014 17.9 12.1 1.3 1 0 0 1 1 1 1 Mediator complex subunit 3 fungal DUF812 PF05667.11 ORF113917 - 0.041 12.8 6.2 0.048 12.5 6.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Endomucin PF07010.12 ORF113917 - 0.13 12.2 24.2 0.16 11.9 24.2 1.1 1 0 0 1 1 1 0 Endomucin Hamartin PF04388.12 ORF113917 - 0.27 9.9 12.5 0.32 9.6 12.5 1.0 1 0 0 1 1 1 0 Hamartin protein SprA-related PF12118.8 ORF113917 - 0.39 9.8 26.1 0.5 9.5 26.1 1.0 1 0 0 1 1 1 0 SprA-related family Mucin PF01456.17 ORF113917 - 0.68 9.9 35.3 3.5 7.6 35.3 2.3 1 1 0 1 1 1 0 Mucin-like glycoprotein Caps_synth PF05704.12 ORF113611 - 1.8e-15 57.1 0.1 4.1e-14 52.6 0.0 2.1 2 0 0 2 2 2 2 Capsular polysaccharide synthesis protein Gly_transf_sug PF04488.15 ORF113611 - 1.2e-06 29.0 0.0 7.3e-06 26.5 0.0 2.1 2 0 0 2 2 2 1 Glycosyltransferase sugar-binding region containing DXD motif AAA_lid_7 PF17867.1 ORF111113 - 0.019 15.2 1.7 0.053 13.7 1.7 1.8 1 1 0 1 1 1 0 Midasin AAA lid domain PPR_2 PF13041.6 ORF110880 - 4.7e-09 36.3 0.0 1.5e-08 34.7 0.0 1.9 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF110880 - 1.3e-08 34.8 0.0 2e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 ORF110880 - 0.00035 20.6 0.0 0.0082 16.3 0.0 2.9 3 0 0 3 3 3 1 PPR repeat PPR_1 PF12854.7 ORF110880 - 0.0009 18.9 0.0 0.74 9.6 0.0 2.9 3 0 0 3 3 3 2 PPR repeat PPR_long PF17177.4 ORF110880 - 0.0044 16.4 0.0 0.0064 15.9 0.0 1.2 1 0 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP Toxin_21 PF08091.11 ORF109777 - 0.059 13.3 0.4 0.059 13.3 0.4 2.5 2 0 0 2 2 2 0 Spider insecticidal peptide H2TH PF06831.14 ORF109093 - 2.3e-33 114.1 0.0 3.4e-33 113.5 0.0 1.3 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain Fapy_DNA_glyco PF01149.24 ORF109093 - 5e-32 110.9 0.0 1.5e-31 109.4 0.0 1.7 2 0 0 2 2 2 1 Formamidopyrimidine-DNA glycosylase N-terminal domain zf-FPG_IleRS PF06827.14 ORF109093 - 8.7e-10 38.3 4.6 1.7e-09 37.4 4.6 1.5 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS Auto_anti-p27 PF06677.12 ORF109093 - 0.011 15.9 1.8 0.022 14.9 1.8 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-dskA_traR PF01258.17 ORF109093 - 0.065 13.2 2.3 0.11 12.4 2.3 1.4 1 0 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger zf-B_box PF00643.24 ORF109093 - 0.65 10.2 2.8 3 8.1 2.8 2.0 1 1 0 1 1 1 0 B-box zinc finger Beta-lactamase PF00144.24 ORF106127 - 3.8e-06 26.4 0.0 7.5e-06 25.4 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase HA PF03457.14 NODE_26482_length_804_cov_187.271782_g20718_i0forward_frame_1 - 0.0011 19.2 5.3 7.7 6.9 0.0 4.3 4 0 0 4 4 4 3 Helicase associated domain Serine_rich PF08824.10 NODE_26482_length_804_cov_187.271782_g20718_i0forward_frame_1 - 0.0024 17.9 2.7 0.0045 17.0 2.7 1.4 1 0 0 1 1 1 1 Serine rich protein interaction domain IFNGR1 PF07140.11 NODE_26451_length_805_cov_65.410390_g20691_i0reverse_frame_2 - 0.15 12.1 0.4 0.29 11.2 0.4 1.4 1 0 0 1 1 1 0 Interferon gamma receptor (IFNGR1) Tryp_alpha_amyl PF00234.22 NODE_26451_length_805_cov_65.410390_g20691_i0forward_frame_3 - 5.8 7.4 9.7 1.8 9.1 6.6 1.8 2 1 0 2 2 2 0 Protease inhibitor/seed storage/LTP family DUF4457 PF14652.6 NODE_26451_length_805_cov_65.410390_g20691_i0forward_frame_2 - 9.2e-34 117.1 0.5 2.6e-23 82.8 0.1 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4457) DUF2254 PF10011.9 NODE_26449_length_805_cov_74.857143_g20689_i0reverse_frame_3 - 2 7.2 4.7 3.7 6.3 4.7 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) TetR_C_19 PF17924.1 ORF95829 - 1.1 9.9 9.5 0.28 11.8 1.6 2.7 1 1 2 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Methyltransf_11 PF08241.12 ORF93310 - 6.7e-13 49.1 0.2 1.2e-12 48.3 0.2 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF93310 - 2.8e-12 46.7 0.2 4e-12 46.2 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF93310 - 1.5e-11 44.8 0.4 3.1e-11 43.8 0.4 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF93310 - 2.6e-10 40.9 0.2 5.3e-10 39.9 0.2 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF93310 - 1.1e-07 31.8 0.0 1.4e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF93310 - 0.016 14.5 0.0 0.026 13.8 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase MTS PF05175.14 ORF93310 - 0.019 14.5 0.2 0.053 13.1 0.2 1.8 1 1 0 1 1 1 0 Methyltransferase small domain Methyltransf_16 PF10294.9 ORF93310 - 0.13 12.0 0.9 1 9.0 0.9 2.0 1 1 0 1 1 1 0 Lysine methyltransferase Methyltransf_29 PF03141.16 ORF93310 - 0.16 10.5 0.1 0.25 9.9 0.1 1.3 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase KH_1 PF00013.29 ORF92817 - 0.0056 16.5 0.1 0.21 11.4 0.0 2.4 2 0 0 2 2 2 2 KH domain DUF5478 PF17572.2 ORF84098 - 0.93 9.6 3.3 12 6.1 0.2 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5478) DUF3848 PF12959.7 ORF77801 - 0.29 11.2 7.2 1.4 9.0 1.0 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3848) DUF4296 PF14129.6 ORF77801 - 2.5 8.8 7.5 0.95 10.1 0.2 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4296) COR PF16095.5 ORF73904 - 0.098 12.5 0.9 9.1 6.0 0.1 2.3 2 0 0 2 2 2 0 C-terminal of Roc, COR, domain TetR_C_19 PF17924.1 ORF73904 - 1.7 9.3 9.0 0.54 10.9 0.9 2.8 2 2 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Flagellin_N PF00669.20 ORF69703 - 0.12 12.5 0.9 0.24 11.5 0.2 1.7 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region GLTP PF08718.11 ORF69703 - 0.3 11.4 2.5 0.23 11.7 0.5 1.9 2 1 0 2 2 2 0 Glycolipid transfer protein (GLTP) Spore_III_AE PF09546.10 ORF69703 - 0.31 10.2 0.6 0.6 9.3 0.3 1.6 1 1 1 2 2 2 0 Stage III sporulation protein AE (spore_III_AE) DUF1977 PF09320.11 ORF69550 - 4.1e-10 39.9 4.6 4.1e-10 39.9 4.6 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF1977) DnaJ PF00226.31 ORF69550 - 1.1e-06 28.6 2.2 2e-06 27.8 0.2 2.2 2 0 0 2 2 2 1 DnaJ domain Orf78 PF06024.12 ORF69550 - 0.044 14.1 1.4 0.055 13.8 0.1 1.9 2 0 0 2 2 2 0 Orf78 (ac78) UPF0258 PF06789.12 ORF69550 - 0.052 13.7 0.6 0.21 11.7 0.9 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0258) UL17 PF17640.2 ORF67451 - 0.15 12.1 3.8 0.64 10.0 0.3 2.9 2 1 1 3 3 3 0 Uncharacterized UL17 Ion_trans PF00520.31 ORF61988 - 1.4e-08 34.3 10.5 1.8e-08 33.9 10.5 1.1 1 0 0 1 1 1 1 Ion transport protein Paramyxo_C PF01692.18 ORF61988 - 0.053 12.9 0.3 0.089 12.2 0.3 1.3 1 0 0 1 1 1 0 Paramyxovirus non-structural protein C PKD_channel PF08016.12 ORF61988 - 0.073 11.7 9.2 0.61 8.7 1.0 2.1 2 0 0 2 2 2 0 Polycystin cation channel DUF948 PF06103.11 ORF61988 - 0.91 9.8 3.8 4.9 7.5 1.1 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) ABC_tran PF00005.27 ORF60573 - 3.1e-39 134.6 0.0 4.3e-39 134.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF60573 - 2.3e-06 27.7 1.0 0.0012 18.7 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 ORF60573 - 3.8e-06 27.2 0.6 2.2e-05 24.7 0.6 2.0 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 ORF60573 - 0.0001 21.8 0.0 0.00018 21.0 0.0 1.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 ORF60573 - 0.00018 21.5 0.3 0.00056 19.9 0.2 1.8 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 ORF60573 - 0.0013 19.1 2.8 0.0028 18.1 2.7 1.5 1 1 0 1 1 1 1 AAA ATPase domain Sigma54_activat PF00158.26 ORF60573 - 0.0041 16.8 0.4 0.045 13.4 0.0 2.1 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_29 PF13555.6 ORF60573 - 0.018 14.8 0.1 0.034 13.9 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain IstB_IS21 PF01695.17 ORF60573 - 0.019 14.7 0.1 0.86 9.3 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_25 PF13481.6 ORF60573 - 0.025 14.2 2.0 0.39 10.3 2.0 2.5 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF60573 - 0.029 14.4 0.1 0.059 13.5 0.1 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase PRK PF00485.18 ORF60573 - 0.055 13.2 0.0 0.079 12.7 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_28 PF13521.6 ORF60573 - 0.084 13.1 0.0 0.2 11.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF60573 - 0.093 12.6 0.0 0.093 12.6 0.0 2.2 2 1 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 ORF60573 - 0.1 13.1 0.0 0.2 12.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 ORF60573 - 0.11 11.7 0.1 0.23 10.6 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain AAA PF00004.29 ORF60573 - 0.12 12.8 0.2 0.43 11.0 0.2 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 ORF60573 - 0.12 12.6 0.0 0.79 10.0 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit G-alpha PF00503.20 ORF60573 - 0.12 11.5 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_5 PF07728.14 ORF60573 - 0.13 12.3 0.4 0.5 10.4 0.2 2.0 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF87 PF01935.17 ORF60573 - 0.16 12.1 0.4 0.34 11.0 0.4 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain Pkinase PF00069.25 ORF59997 - 3.4e-74 249.5 0.0 4.2e-74 249.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF59997 - 6.3e-36 124.0 0.0 7.5e-36 123.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF59997 - 0.0062 15.9 0.1 0.009 15.4 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF59997 - 0.015 14.2 0.2 0.02 13.9 0.2 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF59997 - 0.022 14.1 0.0 0.028 13.8 0.0 1.4 1 0 0 1 1 1 0 Kinase-like YcxB PF14317.6 ORF59997 - 0.14 11.9 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 YcxB-like protein Hydin_ADK PF17213.3 ORF51932 - 3.2 8.0 5.7 4.5 7.5 5.7 1.1 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain PAE PF03283.13 ORF50289 - 0.029 13.5 1.0 0.04 13.0 1.0 1.1 1 0 0 1 1 1 0 Pectinacetylesterase Man-6-P_recep PF02157.15 ORF50283 - 0.23 10.5 0.3 0.47 9.5 0.3 1.6 1 0 0 1 1 1 0 Mannose-6-phosphate receptor Pentapeptide PF00805.22 ORF48643 - 1.7e-12 46.7 18.9 1.9e-07 30.6 4.0 3.8 2 1 1 4 4 4 3 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF48643 - 1.8e-10 40.8 9.8 4.9e-07 29.8 2.7 2.2 1 1 1 2 2 2 2 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF48643 - 4.9e-06 26.6 24.3 0.00033 20.8 3.4 3.1 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) IF4E PF01652.18 ORF47715 - 4.9e-29 101.2 1.6 6.5e-29 100.8 1.6 1.2 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E UL17 PF17640.2 ORF46557 - 0.15 12.1 3.8 0.64 10.0 0.3 2.9 2 1 1 3 3 3 0 Uncharacterized UL17 GED PF02212.18 ORF45140 - 2.1e-17 63.0 1.1 1.1e-08 35.1 0.0 2.1 2 0 0 2 2 2 2 Dynamin GTPase effector domain ThiF PF00899.21 ORF43048 - 4.6e-37 127.7 1.4 7e-37 127.1 1.4 1.2 1 0 0 1 1 1 1 ThiF family UDPG_MGDP_dh_N PF03721.14 ORF43048 - 0.00074 19.1 1.0 0.0016 18.1 1.0 1.7 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DAO PF01266.24 ORF43048 - 0.0011 18.6 1.6 0.0017 18.0 1.6 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase Sacchrp_dh_NADP PF03435.18 ORF43048 - 0.0012 19.2 1.5 0.0059 16.9 1.5 2.0 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 ORF43048 - 0.0052 17.2 0.4 0.02 15.3 0.4 2.0 1 1 0 1 1 1 1 Putative NAD(P)-binding 3HCDH_N PF02737.18 ORF43048 - 0.019 14.9 0.1 0.029 14.3 0.1 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 ORF43048 - 0.044 13.5 0.0 0.075 12.7 0.0 1.4 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ApbA PF02558.16 ORF43048 - 0.12 12.0 0.1 0.21 11.2 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Docking PF08990.11 ORF41934 - 0.54 9.9 4.3 0.32 10.6 0.9 2.0 2 0 0 2 2 2 0 Erythronolide synthase docking Skp1 PF01466.19 ORF40822 - 0.024 14.7 0.2 6.5 7.0 0.0 3.3 3 0 0 3 3 3 0 Skp1 family, dimerisation domain DUF3658 PF12395.8 ORF40822 - 0.057 13.3 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function FAD_binding_3 PF01494.19 ORF37463 - 4.8e-08 32.6 0.0 6.1e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF37463 - 8.5e-07 28.5 0.0 1.2e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF37463 - 0.00024 20.3 1.5 0.027 13.6 0.5 2.4 3 0 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 ORF37463 - 0.0092 16.2 0.3 0.019 15.2 0.3 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF37463 - 0.014 14.6 0.1 0.032 13.5 0.1 1.5 2 0 0 2 2 2 0 Thi4 family HI0933_like PF03486.14 ORF37463 - 0.018 13.7 1.1 0.034 12.8 0.5 1.7 3 0 0 3 3 3 0 HI0933-like protein Pyr_redox PF00070.27 ORF37463 - 0.031 14.8 0.0 3.1 8.4 0.1 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF37463 - 0.077 12.2 0.0 0.46 9.7 0.1 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pkinase PF00069.25 ORF29889 - 1.5e-61 208.0 4.1 1.9e-61 207.8 4.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF29889 - 6.4e-35 120.7 1.0 8e-35 120.4 1.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF29889 - 1.6e-07 30.5 0.0 2.3e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF29889 - 7.4e-06 25.5 0.0 1.3e-05 24.7 0.0 1.4 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF29889 - 3e-05 24.1 0.1 5.2e-05 23.3 0.1 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF29889 - 0.00031 19.8 1.7 0.00043 19.3 1.7 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF29889 - 0.00041 19.8 0.5 0.00059 19.3 0.5 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family 5_nucleotid PF05761.14 ORF29889 - 0.0011 18.0 0.5 0.0015 17.5 0.5 1.1 1 0 0 1 1 1 1 5' nucleotidase family Choline_kinase PF01633.20 ORF29889 - 0.0085 15.7 2.4 0.015 14.9 2.0 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase Methyltransf_25 PF13649.6 ORF25924 - 6.6e-12 46.0 0.0 1.3e-11 45.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF25924 - 1.1e-10 41.5 0.0 2.7e-10 40.2 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF25924 - 1.3e-09 38.1 0.0 3.4e-09 36.7 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF25924 - 3.1e-09 37.3 0.0 6.8e-09 36.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF25924 - 2.2e-08 34.7 0.0 9.8e-08 32.7 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain MetW PF07021.12 ORF25924 - 6.2e-06 25.9 0.0 3.9e-05 23.3 0.0 1.9 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_9 PF08003.11 ORF25924 - 4.3e-05 22.6 0.0 6.4e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_32 PF13679.6 ORF25924 - 0.00013 22.0 0.0 0.0002 21.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF25924 - 0.00032 20.3 0.0 0.00051 19.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain N6_N4_Mtase PF01555.18 ORF25924 - 0.017 14.9 0.0 0.023 14.4 0.0 1.3 1 0 0 1 1 1 0 DNA methylase Methyltransf_18 PF12847.7 ORF25924 - 0.041 13.8 0.0 0.061 13.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Rad10 PF03834.14 ORF25924 - 0.044 13.8 0.0 0.18 11.9 0.0 1.8 2 0 0 2 2 2 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) AdoMet_MTase PF07757.13 ORF25924 - 0.051 13.9 0.1 0.14 12.5 0.1 1.8 1 1 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase JAB PF01398.21 ORF23914 - 3.3e-10 40.0 0.1 1.2e-08 35.0 0.1 2.6 1 1 1 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 ORF23914 - 7.9e-06 25.6 0.3 2.3e-05 24.2 0.2 1.8 2 1 0 2 2 2 1 Prokaryotic homologs of the JAB domain TINF2_N PF14973.6 ORF23914 - 0.035 14.4 0.9 0.059 13.7 0.9 1.3 1 0 0 1 1 1 0 TERF1-interacting nuclear factor 2 N-terminus Aminotran_3 PF00202.21 ORF22953 - 4.7e-93 312.0 0.1 5.2e-93 311.9 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III LysR_substrate PF03466.20 ORF19747 - 2e-19 69.8 0.0 2.6e-19 69.4 0.0 1.1 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 ORF19747 - 0.016 15.2 0.1 0.034 14.1 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family Methyltransf_25 PF13649.6 ORF149902 - 2.7e-11 44.0 0.0 6.1e-11 42.9 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF149902 - 1.6e-10 41.1 0.0 6.8e-10 39.0 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF149902 - 3.9e-10 39.7 0.0 6.8e-10 38.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF149902 - 9.1e-10 39.1 0.0 1.8e-09 38.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF149902 - 1.4e-08 35.4 0.0 5.1e-08 33.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF149902 - 8.9e-05 21.9 0.0 0.00013 21.3 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.6 ORF149902 - 0.00021 21.3 0.0 0.00033 20.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF149902 - 0.00021 20.9 0.1 0.00068 19.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase small domain PrmA PF06325.13 ORF149902 - 0.023 14.1 0.0 0.037 13.4 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) MetW PF07021.12 ORF149902 - 0.1 12.1 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Pkinase PF00069.25 ORF149769 - 4.5e-48 163.9 0.0 5.8e-48 163.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF149769 - 6.4e-35 120.7 0.0 8.6e-35 120.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF149769 - 8.6e-08 31.8 0.0 1.4e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF149769 - 2.5e-05 23.2 0.0 4.2e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF149769 - 0.047 12.6 1.1 0.056 12.4 0.1 1.6 2 0 0 2 2 2 0 Haspin like kinase domain Kdo PF06293.14 ORF149769 - 0.056 12.8 0.0 0.09 12.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Cofac_haem_bdg PF04187.13 ORF148655 - 0.07 13.1 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Haem-binding uptake, Tiki superfamily, ChaN Iso_dh PF00180.20 ORF146798 - 1.8e-81 274.0 0.0 2e-81 273.9 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase C2 PF00168.30 ORF146106 - 3e-07 30.7 0.0 0.002 18.4 0.0 2.3 2 0 0 2 2 2 2 C2 domain AhpC-TSA PF00578.21 ORF14156 - 0.042 13.8 0.4 0.85 9.6 0.1 2.4 3 0 0 3 3 3 0 AhpC/TSA family Frag1 PF10277.9 ORF14156 - 0.06 12.9 2.0 0.084 12.4 2.0 1.2 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family PelG PF16933.5 ORF14156 - 7.5 5.3 9.4 1.2 7.9 5.2 1.6 2 0 0 2 2 2 0 Putative exopolysaccharide Exporter (EPS-E) zf-C2H2 PF00096.26 ORF135984 - 2.7e-05 24.4 11.0 0.014 15.8 2.0 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF135984 - 0.00029 21.4 10.8 0.0074 17.0 2.2 2.5 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_2 PF12756.7 ORF135984 - 0.046 14.1 6.9 0.46 10.9 2.0 2.9 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 ORF135984 - 0.059 13.1 3.9 0.11 12.3 3.9 1.4 1 0 0 1 1 1 0 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF135984 - 0.26 11.6 10.8 3.1 8.2 1.3 2.8 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding DUF4187 PF13821.6 ORF135984 - 1.7 8.5 8.4 9.8 6.1 0.1 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4187) zf-BED PF02892.15 ORF135984 - 8.4 6.5 8.8 9.2 6.4 3.4 2.6 1 1 1 2 2 2 0 BED zinc finger Myb_DNA-binding PF00249.31 ORF135756 - 5.3e-14 52.1 7.4 1e-08 35.2 0.2 3.1 4 0 0 4 4 4 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF135756 - 3.1e-13 49.8 6.5 1.7e-07 31.3 0.3 2.7 1 1 1 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF135756 - 0.00028 20.7 0.4 0.00028 20.7 0.4 2.2 2 1 0 2 2 2 1 Myb DNA-binding like SANT_DAMP1_like PF16282.5 ORF135756 - 0.00074 19.7 0.1 0.0015 18.7 0.1 1.6 1 0 0 1 1 1 1 SANT/Myb-like domain of DAMP1 Arc_PepC_II PF06847.11 ORF135756 - 0.28 11.7 1.7 0.4 11.2 0.1 2.0 2 0 0 2 2 2 0 Archaeal Peptidase A24 C-terminus Type II CDH1_2_SANT_HL1 PF18375.1 ORF13284 - 0.032 14.9 0.7 0.032 14.9 0.7 1.8 2 0 0 2 2 2 0 CDH1/2 SANT-Helical linker 1 Cullin PF00888.22 ORF131923 - 4.9e-37 127.9 5.1 4.9e-37 127.9 5.1 1.5 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF131923 - 1.6e-17 63.3 0.7 4.3e-17 61.9 0.7 1.8 1 0 0 1 1 1 1 Cullin protein neddylation domain DUF3658 PF12395.8 ORF131923 - 0.0027 17.6 0.0 0.024 14.5 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function Arrestin_C PF02752.22 ORF131923 - 0.076 13.5 3.8 0.21 12.0 0.8 2.6 2 1 0 2 2 2 0 Arrestin (or S-antigen), C-terminal domain UFD1 PF03152.14 ORF131895 - 1e-64 217.1 0.3 1.3e-64 216.8 0.3 1.1 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 DUF2559 PF10832.8 ORF131895 - 0.047 13.8 1.3 0.1 12.7 1.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2559) OTU PF02338.19 ORF130989 - 1.2e-16 61.4 0.0 1.8e-16 60.8 0.0 1.3 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF130989 - 0.1 12.0 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 Peptidase C65 Otubain Got1 PF04178.12 ORF129742 - 2.1e-28 99.0 14.1 3.1e-28 98.5 14.1 1.2 1 0 0 1 1 1 1 Got1/Sft2-like family Cytochrom_B562 PF07361.11 ORF129742 - 0.0059 17.2 0.3 0.0092 16.6 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b562 DUF2207 PF09972.9 ORF129742 - 0.13 11.0 0.4 0.16 10.7 0.4 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Ald_Xan_dh_C2 PF02738.18 ORF129728 - 1.5e-44 152.4 3.3 1.7e-44 152.2 3.3 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase JAB PF01398.21 ORF129290 - 3.3e-10 40.0 0.1 1.2e-08 35.0 0.1 2.6 1 1 1 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 ORF129290 - 7.9e-06 25.6 0.3 2.3e-05 24.2 0.2 1.8 2 1 0 2 2 2 1 Prokaryotic homologs of the JAB domain TINF2_N PF14973.6 ORF129290 - 0.035 14.4 0.9 0.059 13.7 0.9 1.3 1 0 0 1 1 1 0 TERF1-interacting nuclear factor 2 N-terminus TTL PF03133.15 ORF128631 - 7.5e-11 41.7 0.0 1.1e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF128631 - 5.9e-07 29.0 0.0 1.2e-06 27.9 0.0 1.6 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF128631 - 0.00046 19.5 0.0 0.00072 18.9 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp FAM176 PF14851.6 ORF128631 - 0.0095 15.6 0.4 0.015 15.0 0.4 1.4 1 0 0 1 1 1 1 FAM176 family RimK PF08443.11 ORF128631 - 0.085 12.4 0.1 0.37 10.4 0.0 1.9 2 0 0 2 2 2 0 RimK-like ATP-grasp domain Pox_Ag35 PF03286.14 ORF128631 - 0.15 11.8 5.4 0.27 11.0 5.4 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF2203 PF09969.9 ORF128631 - 0.28 11.9 2.1 16 6.2 0.2 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) PBP1_TM PF14812.6 ORF128631 - 0.84 10.0 6.2 2 8.8 6.2 1.6 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal SRP40_C PF05022.12 ORF120769 - 6e-16 59.1 6.9 6e-16 59.1 6.9 3.0 2 1 0 2 2 2 1 SRP40, C-terminal domain Presenilin PF01080.17 ORF120769 - 1.2 7.8 13.4 1.4 7.6 13.4 1.3 1 0 0 1 1 1 0 Presenilin Hid1 PF12722.7 ORF120769 - 1.9 6.5 10.5 2.2 6.3 10.5 1.3 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein CDC45 PF02724.14 ORF120769 - 1.9 6.7 22.2 2.5 6.3 22.2 1.2 1 0 0 1 1 1 0 CDC45-like protein BtpA PF03437.15 ORF119352 - 2.9e-109 364.4 0.1 3.3e-109 364.2 0.1 1.0 1 0 0 1 1 1 1 BtpA family MbeD_MobD PF04899.12 ORF116959 - 0.0065 16.6 0.8 1.2 9.3 0.0 2.5 2 0 0 2 2 2 2 MbeD/MobD like Baculo_PEP_C PF04513.12 ORF116959 - 0.18 11.8 4.7 0.32 11.1 0.6 2.3 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 ORF116959 - 0.24 11.4 16.0 0.054 13.5 2.5 2.9 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) Phasin PF05597.11 ORF116959 - 0.54 10.3 13.7 0.36 10.8 2.9 3.1 2 1 0 3 3 3 0 Poly(hydroxyalcanoate) granule associated protein (phasin) FAM184 PF15665.5 ORF116959 - 2.3 7.9 23.9 3.2 7.5 9.7 2.3 1 1 0 2 2 2 0 Family with sequence similarity 184, A and B MtrG PF04210.13 ORF116959 - 2.9 7.8 5.3 26 4.7 0.2 3.3 2 1 1 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G Snapin_Pallidin PF14712.6 ORF116959 - 5.2 7.6 16.6 0.55 10.7 3.3 3.6 2 2 2 4 4 4 0 Snapin/Pallidin zf-B_box PF00643.24 ORF11366 - 1.1e-06 28.7 4.7 1.1e-06 28.7 4.7 3.0 2 1 0 2 2 2 2 B-box zinc finger HTH_19 PF12844.7 ORF11366 - 0.078 13.0 4.3 0.38 10.8 0.7 2.8 2 1 0 2 2 2 0 Helix-turn-helix domain SAM_DrpA PF18255.1 ORF11366 - 1.3 9.3 8.3 1.3 9.3 0.7 3.3 1 1 3 4 4 4 0 DNA processing protein A sterile alpha motif domain Arg_decarbox_C PF17944.1 ORF11366 - 2.5 8.7 0.0 2.5 8.7 0.0 3.1 3 1 0 3 3 3 0 Arginine decarboxylase C-terminal helical extension DUF641 PF04859.12 ORF112054 - 3.2e-06 27.5 19.9 0.023 15.1 1.0 4.0 1 1 3 4 4 4 2 Plant protein of unknown function (DUF641) PKcGMP_CC PF16808.5 ORF112054 - 4.4e-05 23.2 18.6 2.4 8.1 1.6 7.2 4 1 3 8 8 7 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Spc7 PF08317.11 ORF112054 - 0.00041 19.3 30.6 0.017 14.0 16.7 2.4 1 1 1 2 2 2 2 Spc7 kinetochore protein Filament PF00038.21 ORF112054 - 0.0014 18.3 29.8 0.048 13.2 18.9 2.9 1 1 2 3 3 3 2 Intermediate filament protein FAM76 PF16046.5 ORF112054 - 0.0018 17.7 28.9 0.03 13.7 2.2 2.9 1 1 2 3 3 3 2 FAM76 protein GAS PF13851.6 ORF112054 - 0.0018 17.6 26.5 0.0044 16.4 25.9 2.2 1 1 0 1 1 1 1 Growth-arrest specific micro-tubule binding UPF0242 PF06785.11 ORF112054 - 0.0021 18.2 42.5 0.48 10.5 14.7 3.6 1 1 2 3 3 3 2 Uncharacterised protein family (UPF0242) N-terminus Mt_ATP-synt_D PF05873.12 ORF112054 - 0.0026 17.6 8.1 0.0026 17.6 8.1 3.0 2 1 1 3 3 3 1 ATP synthase D chain, mitochondrial (ATP5H) AAA_13 PF13166.6 ORF112054 - 0.0028 16.4 27.9 0.013 14.2 10.0 2.0 1 1 1 2 2 2 2 AAA domain DHR10 PF18595.1 ORF112054 - 0.0038 17.3 15.2 0.0038 17.3 15.2 3.1 2 1 1 3 3 3 1 Designed helical repeat protein 10 domain KASH_CCD PF14662.6 ORF112054 - 0.0041 17.0 29.5 0.026 14.3 6.9 3.9 1 1 2 4 4 4 2 Coiled-coil region of CCDC155 or KASH Atg14 PF10186.9 ORF112054 - 0.0044 16.1 10.8 0.0044 16.1 10.8 2.8 1 1 2 3 3 3 2 Vacuolar sorting 38 and autophagy-related subunit 14 IL10 PF00726.17 ORF112054 - 0.0051 16.3 4.4 0.067 12.7 1.5 2.3 1 1 1 2 2 2 1 Interleukin 10 HOOK PF05622.12 ORF112054 - 0.007 14.6 28.7 0.0074 14.5 27.5 1.6 1 1 0 1 1 1 1 HOOK protein Phage_TTP_12 PF16461.5 ORF112054 - 0.022 14.4 3.9 0.13 11.9 0.2 3.1 2 1 2 4 4 3 0 Lambda phage tail tube protein, TTP HrpB7 PF09486.10 ORF112054 - 0.023 15.1 19.3 0.17 12.2 10.3 3.6 1 1 1 3 3 3 0 Bacterial type III secretion protein (HrpB7) Cas6 PF09559.10 ORF112054 - 0.027 14.5 2.3 0.053 13.5 2.3 1.5 1 0 0 1 1 1 0 Cas6 Crispr Prefoldin_2 PF01920.20 ORF112054 - 0.043 13.8 2.1 0.043 13.8 2.1 5.0 2 1 3 5 5 5 0 Prefoldin subunit Fib_alpha PF08702.10 ORF112054 - 0.046 13.9 33.1 0.092 12.9 17.4 3.4 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family DUF3552 PF12072.8 ORF112054 - 0.059 12.8 30.0 0.86 9.0 7.7 3.2 1 1 2 3 3 3 0 Domain of unknown function (DUF3552) DUF211 PF02680.14 ORF112054 - 0.11 12.7 7.2 1.5 9.1 0.2 2.8 1 1 2 3 3 3 0 Uncharacterized ArCR, COG1888 BST2 PF16716.5 ORF112054 - 0.12 13.0 19.9 0.38 11.4 7.5 3.2 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 MPS2 PF17060.5 ORF112054 - 0.13 11.5 28.5 0.53 9.5 12.1 3.0 1 1 2 3 3 3 0 Monopolar spindle protein 2 PI3K_P85_iSH2 PF16454.5 ORF112054 - 0.16 11.6 32.9 0.54 9.8 1.2 2.5 1 1 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Fez1 PF06818.15 ORF112054 - 0.19 12.1 24.3 0.46 10.9 12.5 3.3 1 1 2 3 3 3 0 Fez1 DivIC PF04977.15 ORF112054 - 0.28 11.0 29.6 0.57 10.0 4.1 5.3 2 1 2 5 5 5 0 Septum formation initiator ATG16 PF08614.11 ORF112054 - 0.42 10.8 26.0 2 8.6 7.4 3.2 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) Spc29 PF17082.5 ORF112054 - 0.46 10.3 21.9 0.45 10.3 7.8 3.2 1 1 2 3 3 3 0 Spindle Pole Component 29 SlyX PF04102.12 ORF112054 - 0.47 11.1 22.6 3.3 8.4 11.2 4.2 1 1 3 4 4 4 0 SlyX FPP PF05911.11 ORF112054 - 0.51 8.5 26.6 0.28 9.3 23.7 1.7 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil FliJ PF02050.16 ORF112054 - 0.52 10.5 30.7 3.2 8.0 4.0 3.4 1 1 2 3 3 3 0 Flagellar FliJ protein Phage_GPO PF05929.11 ORF112054 - 0.66 9.5 17.5 0.86 9.2 13.3 2.3 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase ArgoMid PF16487.5 ORF112054 - 0.85 9.9 3.4 1.1 9.6 1.1 2.6 2 1 1 3 3 1 0 Mid domain of argonaute Exonuc_VII_L PF02601.15 ORF112054 - 0.94 9.0 23.1 1.3 8.5 17.3 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit DUF2203 PF09969.9 ORF112054 - 1 10.1 20.7 2.6 8.8 4.4 3.2 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) APG6_N PF17675.1 ORF112054 - 1.1 9.8 34.2 3.6 8.1 23.8 3.0 2 1 1 3 3 3 0 Apg6 coiled-coil region DUF4200 PF13863.6 ORF112054 - 1.1 9.6 35.3 1.6 9.2 6.2 3.8 1 1 1 3 3 3 0 Domain of unknown function (DUF4200) Lebercilin PF15619.6 ORF112054 - 1.2 8.8 28.3 6.4 6.4 9.3 3.0 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF3450 PF11932.8 ORF112054 - 1.3 8.3 34.0 0.18 11.1 13.4 3.4 1 1 2 4 4 4 0 Protein of unknown function (DUF3450) HemX PF04375.14 ORF112054 - 1.3 8.2 29.0 6.7 5.9 5.4 3.1 1 1 2 3 3 3 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF4407 PF14362.6 ORF112054 - 1.5 8.1 28.2 0.44 9.8 16.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF4795 PF16043.5 ORF112054 - 1.9 8.0 25.3 32 4.1 25.2 3.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) DUF745 PF05335.13 ORF112054 - 2.1 8.0 16.5 1 9.1 13.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF745) ADIP PF11559.8 ORF112054 - 2.5 8.2 34.6 1.1 9.3 12.0 3.6 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding XLF PF09302.11 ORF112054 - 3.6 7.7 19.9 26 4.9 1.0 4.4 1 1 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component TMPIT PF07851.13 ORF112054 - 4.1 6.6 25.0 0.21 10.8 6.2 2.9 1 1 2 3 3 3 0 TMPIT-like protein Taxilin PF09728.9 ORF112054 - 4.4 6.4 30.1 13 4.9 17.3 2.9 1 1 1 2 2 2 0 Myosin-like coiled-coil protein USP8_interact PF08941.10 ORF112054 - 4.9 6.9 16.1 5.5 6.8 6.4 3.1 1 1 2 3 3 3 0 USP8 interacting Glutaredoxin2_C PF04399.13 ORF112054 - 5.2 6.9 9.8 4.1 7.3 3.2 3.2 2 1 2 4 4 4 0 Glutaredoxin 2, C terminal domain CENP-F_leu_zip PF10473.9 ORF112054 - 5.6 7.0 30.5 0.26 11.3 14.6 3.2 1 1 3 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FlaC_arch PF05377.11 ORF112054 - 5.6 7.4 15.7 22 5.5 0.6 4.5 2 1 3 5 5 5 0 Flagella accessory protein C (FlaC) TMF_DNA_bd PF12329.8 ORF112054 - 8 6.5 34.0 2.4 8.2 9.2 5.0 1 1 5 6 6 6 0 TATA element modulatory factor 1 DNA binding Laminin_II PF06009.12 ORF112054 - 8.8 6.3 19.0 0.96 9.5 10.3 2.7 1 1 1 3 3 2 0 Laminin Domain II Keratin PF02422.16 ORF106809 - 4.5 7.0 9.3 3.9 7.2 0.2 2.5 2 0 0 2 2 2 0 Keratin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks75.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks75.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks75.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks75.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:02 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MFS_1 PF07690.16 ORF10249 - 2.1e-24 86.1 50.1 4.5e-21 75.2 26.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF10249 - 2.3e-06 26.7 5.9 2.3e-06 26.7 5.9 2.1 1 1 1 2 2 2 1 MFS_1 like family GXGXG PF01493.19 ORF10249 - 0.34 10.5 1.8 0.5 9.9 1.8 1.2 1 0 0 1 1 1 0 GXGXG motif Glyco_hydro_38C PF07748.13 NODE_26699_length_800_cov_3.180392_g20894_i0forward_frame_1 - 2.4e-07 31.1 0.0 4.2e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Glyco_hydro38C2 PF17677.1 NODE_26699_length_800_cov_3.180392_g20894_i0forward_frame_1 - 4.3e-05 23.5 0.0 7.2e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain FAM101 PF15068.6 NODE_26630_length_801_cov_154.406005_g20835_i0forward_frame_1 - 2.3 8.1 5.6 1.5 8.7 0.9 2.3 2 1 1 3 3 3 0 FAM101 family L_lactis_ph-MCP PF06673.11 NODE_26595_length_802_cov_71.704042_g20809_i0forward_frame_3 - 0.0049 15.9 1.9 0.12 11.3 0.2 2.2 2 0 0 2 2 2 2 Lactococcus lactis bacteriophage major capsid protein adh_short PF00106.25 ORF95279 - 4.9e-37 127.3 0.2 7.4e-37 126.7 0.2 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF95279 - 2.9e-31 108.8 0.2 3.8e-31 108.4 0.2 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF95279 - 5.6e-07 29.6 0.1 8.4e-07 29.1 0.1 1.2 1 0 0 1 1 1 1 KR domain Sacchrp_dh_NADP PF03435.18 ORF95279 - 0.026 14.8 0.1 0.045 14.0 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain PhaC_N PF07167.13 ORF95279 - 0.035 13.8 0.0 0.057 13.1 0.0 1.3 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RLL PF10036.9 ORF94356 - 5e-49 167.5 0.2 6.1e-49 167.2 0.2 1.1 1 0 0 1 1 1 1 RNA transcription, translation and transport factor protein Goodbye PF17109.5 ORF84852 - 0.11 13.0 0.7 0.22 12.0 0.3 1.7 1 1 0 1 1 1 0 fungal STAND N-terminal Goodbye domain LRR_8 PF13855.6 ORF84121 - 2.4e-22 78.5 25.0 1.5e-10 40.7 4.0 4.4 2 1 3 5 5 5 5 Leucine rich repeat LRR_4 PF12799.7 ORF84121 - 7.5e-12 45.3 25.7 2.4e-06 27.8 2.9 5.3 2 1 4 6 6 6 5 Leucine Rich repeats (2 copies) RsmF_methylt_CI PF17126.5 ORF84121 - 0.00067 19.6 1.6 3.6 7.7 0.0 5.3 2 1 3 5 5 5 1 RsmF rRNA methyltransferase first C-terminal domain LRR_1 PF00560.33 ORF84121 - 0.00078 19.7 28.9 0.71 10.7 0.2 7.7 8 1 0 8 8 8 3 Leucine Rich Repeat LRR_9 PF14580.6 ORF84121 - 0.0043 16.6 7.6 0.015 14.8 0.4 2.7 1 1 3 4 4 4 2 Leucine-rich repeat Pyrophosphatase PF00719.19 ORF81677 - 6e-33 113.9 0.1 8.3e-33 113.5 0.1 1.1 1 0 0 1 1 1 1 Inorganic pyrophosphatase RRXRR PF14239.6 ORF81621 - 0.0099 15.7 6.9 0.014 15.2 6.9 1.3 1 0 0 1 1 1 1 RRXRR protein AMPK1_CBM PF16561.5 ORF75121 - 1e-05 25.7 0.2 0.11 12.7 0.0 2.8 2 1 1 3 3 3 2 Glycogen recognition site of AMP-activated protein kinase CBM_35 PF16990.5 ORF75121 - 0.16 12.3 0.0 0.78 10.0 0.0 2.0 2 0 0 2 2 2 0 Carbohydrate binding module (family 35) Herpes_UL56 PF04534.12 ORF73970 - 0.0045 16.5 0.1 0.0065 16.0 0.1 1.2 1 0 0 1 1 1 1 Herpesvirus UL56 protein BATS PF06968.13 ORF70796 - 2.8e-21 75.4 0.0 7.5e-21 74.1 0.0 1.8 1 0 0 1 1 1 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 ORF70796 - 1.7e-11 44.8 0.0 4.9e-10 40.0 0.0 2.4 2 1 0 2 2 2 1 Radical SAM superfamily HEAT_2 PF13646.6 ORF66879 - 2.6e-18 66.2 3.6 6.2e-09 36.1 0.5 2.8 1 1 0 2 2 2 2 HEAT repeats HEAT PF02985.22 ORF66879 - 1.9e-11 43.2 6.1 0.072 13.4 0.1 5.5 5 0 0 5 5 5 4 HEAT repeat RTP1_C1 PF10363.9 ORF66879 - 6.2e-08 32.8 0.0 0.056 13.6 0.0 4.2 1 1 3 4 4 4 2 Required for nuclear transport of RNA pol II C-terminus 1 HEAT_PBS PF03130.16 ORF66879 - 9e-06 25.9 1.1 1.4 9.8 0.6 5.0 4 1 0 4 4 4 1 PBS lyase HEAT-like repeat Cnd1 PF12717.7 ORF66879 - 1.6e-05 25.0 0.6 0.0088 16.1 0.1 2.9 1 1 1 2 2 2 2 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 ORF66879 - 0.00028 21.3 11.1 0.0041 17.6 1.0 4.2 4 2 0 4 4 4 2 HEAT-like repeat Adaptin_N PF01602.20 ORF66879 - 0.00039 19.1 0.1 0.0035 16.0 0.1 2.0 1 1 0 1 1 1 1 Adaptin N terminal region Arm PF00514.23 ORF66879 - 0.036 14.1 1.4 10 6.4 0.1 3.8 3 1 2 5 5 5 0 Armadillo/beta-catenin-like repeat ERAP1_C PF11838.8 ORF66879 - 0.19 11.2 0.1 0.46 10.0 0.1 1.4 1 1 0 1 1 1 0 ERAP1-like C-terminal domain Pkinase PF00069.25 ORF60266 - 1.5e-61 208.1 4.1 1.8e-61 207.8 4.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF60266 - 6.3e-35 120.7 1.0 7.9e-35 120.4 1.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF60266 - 1.6e-07 30.5 0.0 2.3e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF60266 - 7.3e-06 25.5 0.0 1.3e-05 24.7 0.0 1.4 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF60266 - 3e-05 24.1 0.1 5.1e-05 23.3 0.1 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF60266 - 0.00031 19.8 1.7 0.00043 19.3 1.7 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF60266 - 0.0004 19.8 0.5 0.00058 19.3 0.5 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family 5_nucleotid PF05761.14 ORF60266 - 0.0011 18.0 0.5 0.0015 17.5 0.5 1.1 1 0 0 1 1 1 1 5' nucleotidase family Choline_kinase PF01633.20 ORF60266 - 0.0084 15.7 2.4 0.015 14.9 2.0 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase ATG27 PF09451.10 ORF59324 - 2.7e-16 60.2 2.9 3.5e-16 59.9 2.9 1.0 1 0 0 1 1 1 1 Autophagy-related protein 27 CIMR PF00878.18 ORF59324 - 0.0038 17.3 4.1 0.014 15.4 0.3 2.2 2 0 0 2 2 2 1 Cation-independent mannose-6-phosphate receptor repeat Tad PF13400.6 ORF59324 - 0.34 11.3 0.5 0.68 10.3 0.5 1.4 1 0 0 1 1 1 0 Putative Flp pilus-assembly TadE/G-like DUF3141 PF11339.8 ORF58253 - 0.11 11.0 0.0 0.14 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3141) IF4E PF01652.18 ORF54546 - 1.2e-35 122.7 0.0 1.6e-35 122.3 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E CPBP PF02517.16 ORF54421 - 1.5e-14 54.2 5.9 7.3e-14 51.9 5.9 2.1 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease DUF2807 PF10988.8 ORF49697 - 0.022 14.6 0.3 0.072 12.9 0.3 1.9 1 1 0 1 1 1 0 Putative auto-transporter adhesin, head GIN domain Glyco_transf_41 PF13844.6 ORF47625 - 1.1e-22 80.1 0.1 1.5e-20 73.1 0.0 2.0 2 0 0 2 2 2 2 Glycosyl transferase family 41 PCNA_C PF02747.15 ORF38775 - 4.1e-42 143.4 0.0 5.9e-38 129.9 0.0 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 ORF38775 - 3.4e-39 133.5 1.9 5.8e-39 132.7 1.9 1.3 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 ORF38775 - 0.00023 20.7 0.1 0.0003 20.3 0.1 1.2 1 0 0 1 1 1 1 Rad9 NAD_binding_4 PF07993.12 ORF38775 - 0.19 10.9 0.0 0.86 8.7 0.0 1.8 1 1 0 2 2 2 0 Male sterility protein Pkinase PF00069.25 ORF35242 - 1.5e-61 208.1 4.1 1.8e-61 207.8 4.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF35242 - 6.3e-35 120.7 1.0 7.9e-35 120.4 1.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF35242 - 1.6e-07 30.5 0.0 2.3e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF35242 - 7.3e-06 25.5 0.0 1.3e-05 24.7 0.0 1.4 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 ORF35242 - 3e-05 24.1 0.1 5.1e-05 23.3 0.1 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF35242 - 0.00031 19.8 1.7 0.00043 19.3 1.7 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF35242 - 0.0004 19.8 0.5 0.00058 19.3 0.5 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family 5_nucleotid PF05761.14 ORF35242 - 0.0011 18.0 0.5 0.0015 17.5 0.5 1.1 1 0 0 1 1 1 1 5' nucleotidase family Choline_kinase PF01633.20 ORF35242 - 0.0084 15.7 2.4 0.015 14.9 2.0 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase TPP_enzyme_C PF02775.21 ORF33895 - 1.9e-40 138.1 0.4 2.5e-40 137.8 0.4 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Phage_holin_3_2 PF04550.12 ORF33895 - 0.12 12.9 0.1 0.28 11.7 0.1 1.7 1 1 0 1 1 1 0 Phage holin family 2 SLT_2 PF13406.6 ORF32064 - 1.3e-85 287.2 0.1 1.5e-85 287.0 0.1 1.0 1 0 0 1 1 1 1 Transglycosylase SLT domain Glucosaminidase PF01832.20 ORF32064 - 0.014 15.9 0.0 0.016 15.7 0.0 1.5 1 1 0 1 1 1 0 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SLT PF01464.20 ORF32064 - 0.085 12.5 0.0 0.43 10.3 0.0 2.0 1 1 0 1 1 1 0 Transglycosylase SLT domain CRAL_TRIO PF00650.20 ORF29725 - 1.3e-23 83.5 0.1 2e-23 82.9 0.1 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF29725 - 0.047 13.8 0.0 0.091 12.9 0.0 1.5 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain LRR_4 PF12799.7 ORF19246 - 3.7e-09 36.7 6.8 0.0018 18.6 0.1 4.0 2 1 2 4 4 4 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF19246 - 6.2e-09 35.5 9.2 1.2e-05 25.0 0.5 3.2 2 1 1 3 3 3 2 Leucine rich repeat LRR_9 PF14580.6 ORF19246 - 1.6e-08 34.2 0.4 1.6e-08 34.2 0.4 2.0 2 1 0 2 2 2 1 Leucine-rich repeat LRR_1 PF00560.33 ORF19246 - 0.0059 17.0 7.4 1.5 9.7 0.2 5.0 4 1 0 4 4 4 1 Leucine Rich Repeat LRR_6 PF13516.6 ORF19246 - 0.19 11.9 0.4 4.4 7.6 0.0 3.0 2 0 0 2 2 2 0 Leucine Rich repeat ATP-synt_E PF05680.12 ORF19246 - 0.75 10.2 4.5 1.7 9.0 4.5 1.6 1 0 0 1 1 1 0 ATP synthase E chain RLL PF10036.9 ORF16200 - 5e-49 167.5 0.2 6.1e-49 167.2 0.2 1.1 1 0 0 1 1 1 1 RNA transcription, translation and transport factor protein Ank_2 PF12796.7 ORF149124 - 1.4e-47 160.1 7.9 3.8e-19 69.1 0.4 3.7 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF149124 - 8.9e-31 105.9 9.6 4.2e-09 36.8 0.1 4.4 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF149124 - 4.2e-29 100.2 14.6 1.7e-10 40.9 1.6 5.1 1 1 4 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF149124 - 2.9e-28 97.0 8.6 2.1e-07 31.1 0.1 5.3 5 0 0 5 5 5 5 Ankyrin repeat Ank_3 PF13606.6 ORF149124 - 9.7e-24 80.9 0.7 0.00016 21.8 0.0 6.4 6 0 0 6 6 6 5 Ankyrin repeat ubiquitin PF00240.23 ORF149124 - 0.00078 19.1 0.0 0.0014 18.3 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF149124 - 0.022 14.6 0.0 0.04 13.8 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like PK_C PF02887.16 ORF149124 - 0.033 14.4 0.0 3.3 8.0 0.0 3.3 2 1 1 3 3 3 0 Pyruvate kinase, alpha/beta domain UCH PF00443.29 ORF148936 - 1.5e-25 90.1 3.1 1.8e-25 89.9 3.1 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF148936 - 2.4e-07 30.7 3.6 9.1e-07 28.8 3.6 1.8 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Phage_antiter_Q PF06323.11 ORF146026 - 0.037 13.6 0.9 0.055 13.0 0.9 1.2 1 0 0 1 1 1 0 Phage antitermination protein Q UCH PF00443.29 ORF144961 - 2.9e-30 105.6 3.5 3.5e-30 105.3 3.5 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF144961 - 8.4e-11 42.0 4.4 1.4e-10 41.3 4.4 1.3 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase E6 PF00518.17 ORF144961 - 0.0006 20.2 1.1 0.0011 19.4 1.1 1.4 1 0 0 1 1 1 1 Early Protein (E6) TMEM173 PF15009.6 ORF144961 - 0.043 13.0 0.5 0.13 11.4 0.1 1.9 1 1 1 2 2 2 0 Transmembrane protein 173 HapK PF11639.8 ORF144961 - 0.055 14.0 0.1 0.12 12.9 0.1 1.7 1 0 0 1 1 1 0 REDY-like protein HapK TauD PF02668.16 ORF144715 - 1.2e-20 74.4 0.2 1.7e-20 73.9 0.2 1.2 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family DUF2807 PF10988.8 ORF143147 - 0.022 14.6 0.3 0.072 12.9 0.3 1.9 1 1 0 1 1 1 0 Putative auto-transporter adhesin, head GIN domain Secretin PF00263.21 ORF138578 - 2e-45 154.5 0.2 2.7e-45 154.0 0.2 1.2 1 0 0 1 1 1 1 Bacterial type II and III secretion system protein Secretin_N PF03958.17 ORF138578 - 0.00028 21.2 0.1 0.0007 19.9 0.1 1.7 1 0 0 1 1 1 1 Bacterial type II/III secretion system short domain tRNA_anti-codon PF01336.25 ORF134054 - 6.5e-10 38.9 0.0 9.4e-10 38.3 0.0 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.6 ORF134054 - 0.00013 22.1 0.0 0.00021 21.4 0.0 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain U79_P34 PF03064.16 ORF134054 - 0.058 12.7 5.6 0.075 12.4 5.6 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 FAP PF07174.11 ORF134054 - 0.53 9.7 9.6 0.81 9.1 9.6 1.2 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) DUF5427 PF10310.9 ORF134054 - 0.87 8.5 11.1 1.3 7.9 11.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5427) SRP-alpha_N PF04086.13 ORF134054 - 1.4 8.7 12.9 2 8.3 12.9 1.3 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal Ndc1_Nup PF09531.10 ORF134054 - 1.8 7.1 5.1 2 7.0 5.1 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Presenilin PF01080.17 ORF134054 - 6.2 5.5 5.5 6.9 5.3 5.5 1.1 1 0 0 1 1 1 0 Presenilin RR_TM4-6 PF06459.12 ORF134054 - 6.5 6.5 12.9 9 6.0 12.9 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Pkinase PF00069.25 ORF129514 - 2.1e-46 158.4 0.0 2.6e-46 158.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF129514 - 1.2e-30 106.7 0.0 1.4e-30 106.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF129514 - 1.2e-07 31.4 0.0 2.2e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF129514 - 0.00023 20.1 0.0 0.00034 19.5 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF129514 - 0.026 13.5 0.1 0.03 13.3 0.1 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 ORF129514 - 0.045 13.1 0.0 0.073 12.4 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF129514 - 0.15 12.0 0.1 0.46 10.4 0.0 1.9 2 0 0 2 2 2 0 Phosphotransferase enzyme family zf-H3C2 PF16721.5 ORF129485 - 0.04 14.3 0.0 0.084 13.2 0.0 1.6 1 0 0 1 1 1 0 Zinc-finger like, probable DNA-binding Dsh_C PF12316.8 ORF129485 - 5.3 7.4 9.5 7.2 7.0 9.5 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Presenilin PF01080.17 ORF129485 - 5.8 5.6 8.4 6.8 5.3 8.4 1.3 1 0 0 1 1 1 0 Presenilin Sec20 PF03908.13 ORF12869 - 0.1 12.5 4.6 0.69 9.9 0.1 2.9 2 1 0 2 2 2 0 Sec20 DnaI_N PF07319.11 ORF12869 - 0.2 12.4 5.9 0.86 10.3 0.2 3.0 2 2 1 3 3 3 0 Primosomal protein DnaI N-terminus Peptidase_M3_N PF08439.10 ORF12869 - 0.3 11.4 0.2 0.3 11.4 0.2 3.0 3 0 0 3 3 3 0 Oligopeptidase F PET PF06297.14 ORF12869 - 0.33 11.3 1.7 0.48 10.8 0.1 2.0 2 0 0 2 2 2 0 PET Domain Spc7 PF08317.11 ORF12869 - 0.38 9.6 18.2 0.33 9.8 4.1 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF4296 PF14129.6 ORF12869 - 0.39 11.4 4.3 0.53 10.9 0.2 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4296) Allexi_40kDa PF05549.11 ORF12869 - 2.3 7.6 7.0 0.46 10.0 1.9 1.9 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF948 PF06103.11 ORF12869 - 2.8 8.2 4.9 11 6.3 1.4 2.7 2 2 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1002 PF06207.11 ORF12869 - 3 7.3 13.6 0.31 10.5 3.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1002) HAUS-augmin3 PF14932.6 ORF12869 - 9.1 5.8 15.3 2.3 7.7 9.2 2.2 1 1 0 2 2 2 0 HAUS augmin-like complex subunit 3 SHIPPO-rpt PF07004.12 ORF126328 - 1.3e-14 54.3 48.0 0.058 14.3 0.5 8.4 8 0 0 8 8 8 8 Sperm-tail PG-rich repeat Macro PF01661.21 ORF123056 - 3e-34 117.6 0.4 1.2e-33 115.6 0.2 2.0 1 1 1 2 2 2 1 Macro domain DUF1264 PF06884.11 ORF123056 - 0.056 13.0 0.0 0.13 11.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1264) Fasciclin PF02469.22 ORF123056 - 0.11 12.7 0.9 3.1 8.0 0.1 2.2 2 0 0 2 2 2 0 Fasciclin domain Bax1-I PF01027.20 ORF120791 - 1.7e-11 44.4 32.4 1.9e-11 44.2 32.4 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Ribonuc_red_lgC PF02867.15 ORF11733 - 1.3e-59 202.2 0.7 1.9e-57 195.0 0.7 2.0 1 1 0 1 1 1 1 Ribonucleotide reductase, barrel domain Tox-ART-HYD1 PF15633.6 ORF11733 - 0.16 12.7 0.1 26 5.6 0.0 2.4 2 0 0 2 2 2 0 HYD1 signature containing ADP-ribosyltransferase m04gp34like PF12216.8 ORF108785 - 0.28 10.7 0.0 0.28 10.7 0.0 1.9 3 0 0 3 3 3 0 Immune evasion protein FHA PF00498.26 ORF108114 - 1.3e-15 57.5 0.0 4e-15 55.9 0.0 1.8 2 0 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 ORF108114 - 9.9e-05 22.6 0.0 0.00023 21.4 0.0 1.6 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain CPBP PF02517.16 ORF106736 - 1.9e-14 53.8 6.3 9.6e-14 51.5 6.3 2.1 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease DUF3487 PF11990.8 ORF106736 - 0.79 9.6 4.3 29 4.6 0.0 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3487) Atracotoxin PF05353.11 ORF105625 - 0.033 14.2 5.4 0.69 10.0 1.1 3.1 3 0 0 3 3 3 0 Delta Atracotoxin BNIP2 PF12496.8 ORF10116 - 0.26 11.7 3.4 0.56 10.7 3.4 1.5 1 0 0 1 1 1 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 RINGv PF12906.7 ORF100176 - 3.3 7.9 12.6 43 4.3 0.5 2.6 1 1 1 2 2 2 0 RING-variant domain DUF667 PF05018.13 NODE_26743_length_799_cov_2.462042_g20932_i0forward_frame_3 - 0.011 15.4 4.1 0.039 13.7 0.1 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF667) Sulfatase PF00884.23 NODE_26743_length_799_cov_2.462042_g20932_i0forward_frame_2 - 2.3e-21 76.5 0.3 2.8e-21 76.2 0.3 1.1 1 0 0 1 1 1 1 Sulfatase DUF3792 PF12670.7 NODE_26743_length_799_cov_2.462042_g20932_i0forward_frame_2 - 0.052 13.7 1.5 0.11 12.7 1.5 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) DUF2909 PF11137.8 NODE_26743_length_799_cov_2.462042_g20932_i0forward_frame_2 - 0.11 12.4 0.0 0.11 12.4 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2909) ROKNT PF08067.11 NODE_26739_length_799_cov_16.239529_g20928_i0reverse_frame_2 - 0.18 12.1 2.9 0.23 11.8 0.1 2.5 2 0 0 2 2 2 0 ROKNT (NUC014) domain DUF4750 PF15938.5 NODE_26739_length_799_cov_16.239529_g20928_i0forward_frame_2 - 0.32 10.7 0.0 0.32 10.7 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4750) SF3A3 PF16837.5 NODE_26738_length_799_cov_18.989529_g20927_i0reverse_frame_2 - 0.093 13.3 0.6 0.2 12.2 0.6 1.6 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 Dicty_CAD PF05720.12 NODE_26734_length_799_cov_70.446335_g20923_i0forward_frame_3 - 1 9.4 4.8 0.46 10.5 1.4 2.1 1 1 1 2 2 2 0 Cell-cell adhesion domain Trefoil PF00088.18 NODE_26699_length_800_cov_3.180392_g20894_i0reverse_frame_3 - 0.048 13.5 0.6 12 5.9 0.0 2.6 2 0 0 2 2 2 0 Trefoil (P-type) domain DUF4317 PF14199.6 NODE_26699_length_800_cov_3.180392_g20894_i0reverse_frame_2 - 0.098 11.8 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4317) DUF3888 PF13027.6 NODE_26660_length_800_cov_5375.997386_g9198_i8forward_frame_3 - 0.0061 17.0 0.2 0.017 15.6 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3888) DUF3888 PF13027.6 NODE_26659_length_800_cov_5392.564706_g9198_i7forward_frame_3 - 0.0062 17.0 0.2 0.017 15.6 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3888) B3R PF17057.5 NODE_26652_length_801_cov_4.198433_g20855_i0reverse_frame_2 - 1.4 9.1 4.5 1.8 8.8 0.7 2.5 1 1 2 3 3 3 0 Poxviridae B3 protein DUF4116 PF13475.6 NODE_26635_length_801_cov_96.099217_g20839_i0forward_frame_3 - 1.9e-20 72.3 0.0 8.3e-12 44.6 0.0 2.4 1 1 1 2 2 2 2 Domain of unknown function (DUF4116) FIST_C PF10442.9 NODE_26635_length_801_cov_96.099217_g20839_i0forward_frame_3 - 0.036 14.0 0.1 0.059 13.4 0.1 1.4 1 0 0 1 1 1 0 FIST C domain HTH_32 PF13565.6 NODE_26635_length_801_cov_96.099217_g20839_i0forward_frame_3 - 7.3 7.3 7.7 6.2 7.5 1.2 3.0 1 1 2 3 3 3 0 Homeodomain-like domain NAD_binding_1 PF00175.21 ORF97286 - 3.6e-23 82.3 0.0 9e-23 81.0 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF97286 - 6e-14 52.2 0.0 9.3e-14 51.6 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF97286 - 6e-06 26.5 0.0 2.6e-05 24.4 0.0 1.8 1 1 1 2 2 2 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF97286 - 0.12 12.8 0.2 0.22 12.0 0.2 1.4 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC MFS_1 PF07690.16 ORF96641 - 0.00027 20.0 7.0 0.00037 19.5 7.0 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF96641 - 0.047 12.3 6.3 0.15 10.6 5.3 2.1 1 1 1 2 2 2 0 MFS/sugar transport protein DUF1922 PF09082.10 ORF91318 - 0.0077 16.5 0.0 0.016 15.5 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1922) DUF4250 PF14056.6 ORF89835 - 0.23 11.4 4.4 0.72 9.9 0.2 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4250) DUF2730 PF10805.8 ORF89835 - 2.5 8.2 7.2 0.48 10.6 0.1 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF2730) VSP PF03302.13 ORF8562 - 2e-07 30.3 75.0 0.0025 16.7 20.3 4.4 1 1 3 4 4 4 4 Giardia variant-specific surface protein Asp PF00026.23 ORF84617 - 4.2e-11 42.8 0.0 5.3e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF84617 - 0.001 18.8 0.0 0.0016 18.2 0.0 1.2 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Alba PF01918.21 ORF82952 - 1e-16 60.5 1.1 1.5e-16 59.9 1.1 1.3 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 ORF82952 - 0.064 13.2 0.1 0.099 12.6 0.1 1.3 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P DUF5320 PF17253.2 ORF82952 - 0.4 11.8 14.1 5.4 8.2 7.7 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Pkinase PF00069.25 ORF82947 - 7.1e-49 166.5 0.1 8.2e-49 166.3 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF82947 - 1.1e-23 83.9 0.0 1.4e-23 83.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF82947 - 4e-07 29.6 0.0 5.3e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 ORF82947 - 0.034 14.1 0.0 0.05 13.5 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pyr_redox_dim PF02852.22 ORF80580 - 5e-29 100.8 0.0 7.7e-29 100.2 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_2 PF07992.14 ORF80580 - 3.5e-25 88.9 0.0 5.4e-25 88.2 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF80580 - 2.9e-11 43.8 0.0 5.4e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF80580 - 0.00021 20.7 0.0 0.00026 20.3 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF80580 - 0.0021 16.8 0.0 0.0028 16.4 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein DAO PF01266.24 ORF80580 - 0.063 12.9 0.0 0.078 12.5 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase Pro_isomerase PF00160.21 ORF79680 - 2.7e-44 151.2 0.1 3.8e-44 150.7 0.1 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RRM_1 PF00076.22 ORF78291 - 1.4e-18 66.4 0.0 2.4e-18 65.7 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Coilin_N PF15862.5 ORF78291 - 0.00093 19.0 22.5 0.079 12.8 0.0 3.8 1 1 3 4 4 4 1 Coilin N-terminus RRM_7 PF16367.5 ORF78291 - 0.0071 16.4 0.0 0.023 14.8 0.0 1.9 1 0 0 1 1 1 1 RNA recognition motif Nup35_RRM_2 PF14605.6 ORF78291 - 0.1 12.7 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Fer4 PF00037.27 ORF73918 - 0.038 13.8 37.8 0.61 10.0 0.6 7.2 6 0 0 6 6 6 0 4Fe-4S binding domain Ribosomal_S24e PF01282.19 ORF73918 - 0.16 11.9 0.0 1.3e+02 2.6 0.0 3.1 3 0 0 3 3 3 0 Ribosomal protein S24e DUF3152 PF11350.8 ORF73918 - 0.17 11.5 13.6 6.3 6.4 0.5 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3152) ApoLp-III PF07464.11 ORF73333 - 0.03 14.4 0.3 0.38 10.8 0.0 2.3 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Baculo_PEP_C PF04513.12 ORF73333 - 0.046 13.8 0.3 0.14 12.2 0.0 1.9 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus CAP_N PF01213.19 ORF73333 - 0.049 13.1 0.4 0.098 12.1 0.2 1.6 1 1 1 2 2 2 0 Adenylate cyclase associated (CAP) N terminal DUF3887 PF13026.6 ORF73333 - 0.19 12.6 0.3 0.19 12.6 0.3 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3887) Lebercilin PF15619.6 ORF73333 - 0.48 10.1 4.3 8.6 6.0 0.4 2.3 2 0 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF1461 PF07314.11 ORF73333 - 1.8 8.4 6.7 0.32 10.9 0.2 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1461) DUF5082 PF16888.5 ORF73333 - 1.8 8.9 6.2 1.6 9.0 1.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) RskA PF10099.9 ORF59629 - 0.12 12.7 8.8 0.19 12.0 8.8 1.4 1 0 0 1 1 1 0 Anti-sigma-K factor rskA DUF2407_C PF13373.6 ORF59077 - 0.16 12.1 2.3 0.24 11.5 2.3 1.2 1 0 0 1 1 1 0 DUF2407 C-terminal domain GET2 PF08690.10 ORF59077 - 3.2 7.3 6.4 4.1 7.0 6.4 1.2 1 0 0 1 1 1 0 GET complex subunit GET2 EMC3_TMCO1 PF01956.16 ORF59077 - 6.5 6.4 9.6 11 5.7 9.6 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Glycos_transf_2 PF00535.26 ORF58403 - 1.4e-18 67.3 0.0 1.9e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF58403 - 4.5e-05 23.4 0.1 0.00011 22.2 0.1 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 DUF3325 PF11804.8 ORF58403 - 0.032 14.4 1.7 0.059 13.5 1.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) Tau95 PF09734.9 ORF54349 - 7.5e-17 62.4 0.1 1.3e-16 61.7 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain MFS_1 PF07690.16 ORF54183 - 4.5e-16 58.7 7.7 5.7e-16 58.4 7.7 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF54183 - 0.00028 19.9 0.5 0.00028 19.9 0.5 2.6 1 1 2 3 3 3 2 Sugar (and other) transporter OATP PF03137.20 ORF54183 - 0.0013 17.2 13.4 0.005 15.2 11.5 2.5 1 1 1 2 2 2 1 Organic Anion Transporter Polypeptide (OATP) family CCB1 PF12046.8 ORF54183 - 0.19 11.0 3.6 1.2 8.4 0.0 2.9 3 0 0 3 3 3 0 Cofactor assembly of complex C subunit B Colicin_V PF02674.16 ORF54183 - 1.4 8.9 11.4 0.71 9.8 4.8 2.9 1 1 3 4 4 4 0 Colicin V production protein Pyr_redox_dim PF02852.22 ORF530 - 4.8e-29 100.8 0.0 7.7e-29 100.2 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_2 PF07992.14 ORF530 - 1.4e-23 83.6 0.0 2.2e-23 82.9 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF530 - 3e-11 43.7 0.0 5.4e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF530 - 0.00028 20.2 0.0 0.00036 19.9 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF530 - 0.0024 16.6 0.0 0.0034 16.2 0.0 1.2 1 0 0 1 1 1 1 HI0933-like protein 7TM_GPCR_Srw PF10324.9 ORF516 - 0.0071 15.7 1.2 0.0071 15.7 1.2 1.5 2 0 0 2 2 2 1 Serpentine type 7TM GPCR chemoreceptor Srw Sigma_reg_N PF13800.6 ORF516 - 0.028 14.7 3.3 2.7 8.3 0.2 3.1 3 0 0 3 3 3 0 Sigma factor regulator N-terminal DUF4064 PF13273.6 ORF516 - 0.44 10.8 6.3 2.7 8.3 1.1 2.8 3 1 0 3 3 3 0 Protein of unknown function (DUF4064) DUF1600 PF07667.11 ORF516 - 1.9 8.7 6.9 1.1 9.4 3.6 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1600) SNARE PF05739.19 ORF51283 - 5.5e-13 48.7 0.5 6.8e-12 45.2 0.2 2.5 2 0 0 2 2 2 1 SNARE domain Synaptobrevin PF00957.21 ORF51283 - 0.00019 21.1 0.4 0.00019 21.1 0.4 2.4 3 1 0 3 3 3 1 Synaptobrevin ASL_C PF08328.11 ORF51283 - 0.0046 17.1 1.9 0.0046 17.1 1.9 2.2 2 1 0 2 2 2 1 Adenylosuccinate lyase C-terminal DUF1380 PF07128.12 ORF51283 - 0.04 14.1 0.4 0.15 12.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1380) HSBP1 PF06825.12 ORF51283 - 0.042 13.7 2.8 0.069 13.0 0.5 2.5 2 0 0 2 2 2 0 Heat shock factor binding protein 1 Phe_tRNA-synt_N PF02912.18 ORF51283 - 0.042 13.8 0.6 0.042 13.8 0.6 2.7 3 1 0 3 3 3 0 Aminoacyl tRNA synthetase class II, N-terminal domain Sec20 PF03908.13 ORF51283 - 0.052 13.5 6.0 3.5 7.6 0.1 2.9 2 1 0 2 2 2 0 Sec20 Spectrin PF00435.21 ORF51283 - 0.22 12.0 12.0 0.89 10.1 0.4 3.7 1 1 1 2 2 2 0 Spectrin repeat DUF2207 PF09972.9 ORF51283 - 0.22 10.2 9.6 0.012 14.4 0.9 2.1 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) Orf78 PF06024.12 ORF51283 - 0.29 11.4 0.1 0.29 11.4 0.1 2.8 2 1 0 3 3 3 0 Orf78 (ac78) DUF768 PF05589.11 ORF51283 - 0.67 10.0 3.3 1.7 8.7 1.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF768) RNA_pol_Rbc25 PF08292.12 ORF51283 - 0.69 10.2 5.3 16 5.7 3.9 2.3 2 0 0 2 2 2 0 RNA polymerase III subunit Rpc25 NPV_P10 PF05531.12 ORF51283 - 0.71 10.4 13.6 0.23 12.0 4.2 3.2 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Pex24p PF06398.11 ORF51283 - 0.82 8.6 6.2 0.19 10.6 0.4 2.3 1 1 2 3 3 3 0 Integral peroxisomal membrane peroxin DUF2433 PF10360.9 ORF51283 - 1 9.4 10.9 3 8.0 8.3 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2433) RPW8 PF05659.11 ORF51283 - 1.9 8.2 10.8 1.8 8.2 5.0 2.4 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 YtxH PF12732.7 ORF51283 - 2 9.0 8.9 9.5e+02 0.4 8.9 3.4 1 1 0 1 1 1 0 YtxH-like protein DUF2205 PF10224.9 ORF51283 - 2.2 8.3 10.7 0.32 11.0 2.7 3.1 3 1 0 3 3 3 0 Short coiled-coil protein Spore_III_AB PF09548.10 ORF51283 - 2.8 8.0 10.9 6.2 6.9 0.2 2.8 2 1 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) DUF4199 PF13858.6 ORF51283 - 3 8.2 4.7 8.5 6.7 0.0 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) DUF155 PF02582.14 ORF51283 - 6.3 6.9 12.3 3.8 7.6 6.4 2.3 1 1 1 2 2 2 0 Uncharacterised ACR, YagE family COG1723 MutS_III PF05192.18 ORF51283 - 6.7 6.9 14.3 12 6.1 14.3 1.4 1 1 0 1 1 1 0 MutS domain III ETRAMP PF09716.10 ORF51283 - 7 6.8 9.9 60 3.8 9.9 2.6 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) adh_short PF00106.25 ORF45833 - 4e-29 101.5 0.0 5e-29 101.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF45833 - 6.2e-13 48.9 0.0 8e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF45833 - 1.3e-06 28.4 0.2 4.6e-06 26.7 0.2 1.8 1 1 0 1 1 1 1 KR domain GP120 PF00516.18 ORF45833 - 0.0081 14.8 0.3 0.01 14.5 0.3 1.1 1 0 0 1 1 1 1 Envelope glycoprotein GP120 Polysacc_synt_2 PF02719.15 ORF45833 - 0.015 14.5 0.0 0.02 14.0 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein 3HCDH_N PF02737.18 ORF45833 - 0.025 14.5 0.0 0.038 13.9 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CAP_GLY PF01302.25 ORF42467 - 2.2e-20 72.4 2.8 3.3e-20 71.8 2.8 1.3 1 0 0 1 1 1 1 CAP-Gly domain Ubiquitin_2 PF14560.6 ORF42467 - 2.6e-19 69.5 0.0 4.4e-19 68.7 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin-like domain ubiquitin PF00240.23 ORF42467 - 0.00058 19.6 0.0 0.0021 17.8 0.0 1.9 1 1 0 1 1 1 1 Ubiquitin family Ank_4 PF13637.6 ORF40110 - 4.4e-11 43.1 0.2 1.7e-05 25.3 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF40110 - 3e-07 30.9 0.0 5.5e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF40110 - 4.2e-07 30.1 0.1 6.2e-05 23.2 0.2 2.8 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF40110 - 2.8e-06 27.5 0.3 0.00027 21.3 0.0 3.0 4 0 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 ORF40110 - 0.0013 19.0 0.1 0.024 15.1 0.0 2.8 3 0 0 3 3 3 1 Ankyrin repeat zf-C2H2_6 PF13912.6 ORF39270 - 2.9e-06 27.1 2.1 8.7e-06 25.6 2.1 1.9 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2_4 PF13894.6 ORF39270 - 0.00036 21.1 2.3 0.0011 19.6 1.5 2.3 2 0 0 2 2 2 1 C2H2-type zinc finger zf-Di19 PF05605.12 ORF39270 - 0.0036 17.6 0.6 0.011 16.0 0.6 1.9 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding CpXC PF14353.6 ORF39270 - 0.0099 15.9 0.8 0.02 14.9 0.2 1.9 2 0 0 2 2 2 1 CpXC protein RTP1_C2 PF10304.9 ORF39270 - 0.042 13.6 0.2 0.077 12.7 0.2 1.5 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 2 AT_hook PF02178.19 ORF39270 - 0.055 13.3 1.2 0.16 12.0 1.2 1.8 1 0 0 1 1 1 0 AT hook motif zf-H2C2_2 PF13465.6 ORF39270 - 0.25 11.8 0.3 0.25 11.8 0.3 3.1 3 0 0 3 3 3 0 Zinc-finger double domain zf-C2H2 PF00096.26 ORF39270 - 0.31 11.6 1.8 1.2 9.7 1.8 2.1 1 0 0 1 1 1 0 Zinc finger, C2H2 type Presenilin PF01080.17 ORF39270 - 8.7 5.0 7.9 10 4.7 7.9 1.1 1 0 0 1 1 1 0 Presenilin TPR_12 PF13424.6 ORF36133 - 4.3e-07 30.1 0.9 0.012 15.9 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TC1 PF15063.6 ORF36133 - 0.045 13.6 0.1 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 Thyroid cancer protein 1 SIR2 PF02146.17 ORF35252 - 1.9e-07 31.2 0.0 3e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Sir2 family AGH PF17558.2 ORF3462 - 0.0059 16.8 0.3 0.017 15.3 0.0 1.9 2 0 0 2 2 2 1 Androgenic gland hormone Lipase_3 PF01764.25 ORF28481 - 3.5e-12 46.4 0.0 4.8e-12 46.0 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF28481 - 0.062 13.9 1.9 0.1 13.2 1.9 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF3089 PF11288.8 ORF28481 - 0.077 12.5 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) DNTTIP1_dimer PF18192.1 ORF27066 - 0.83 10.0 10.8 1.6 9.1 8.1 2.6 2 1 1 3 3 3 0 DNTTIP1 dimerisation domain 2OG-FeII_Oxy_3 PF13640.6 ORF20618 - 2.8e-11 44.2 0.0 4.5e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 ORF20618 - 3.1e-06 27.8 0.0 8.2e-06 26.4 0.0 1.7 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily Lipase_3 PF01764.25 ORF20391 - 1.5e-28 99.5 0.0 2.4e-28 98.8 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) 3HCDH_RFF PF18321.1 ORF20391 - 0.18 12.3 0.0 0.31 11.5 0.0 1.3 1 0 0 1 1 1 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DJ-1_PfpI PF01965.24 ORF17773 - 8e-17 61.5 1.0 1.9e-16 60.3 1.0 1.6 1 1 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 ORF17773 - 1.2e-07 31.6 0.2 1.2e-05 25.2 0.2 2.3 1 1 0 1 1 1 1 ThiJ/PfpI family-like UDPG_MGDP_dh_C PF03720.15 ORF17773 - 0.022 15.2 0.1 4.5 7.7 0.0 2.3 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Uteroglobin PF01099.17 ORF17773 - 0.064 13.6 0.3 0.15 12.4 0.3 1.6 1 0 0 1 1 1 0 Uteroglobin family DUF412 PF04217.13 ORF17129 - 0.11 12.4 0.2 0.19 11.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF412 YbgS PF13985.6 ORF17129 - 1.5 9.1 8.3 2.7 8.3 8.3 1.4 1 0 0 1 1 1 0 YbgS-like protein Gemini_V2 PF01524.17 ORF16171 - 0.047 13.9 0.1 1.4 9.2 0.0 2.5 2 0 0 2 2 2 0 Geminivirus V2 protein DNTTIP1_dimer PF18192.1 ORF16171 - 0.89 9.9 10.8 1.6 9.1 8.1 2.6 2 1 1 3 3 3 0 DNTTIP1 dimerisation domain KfrA_N PF11740.8 ORF151495 - 0.46 11.2 11.0 0.99 10.1 11.0 1.5 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term Fer4_21 PF14697.6 ORF149647 - 0.063 13.4 1.2 4.1 7.6 0.2 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain PDEase_I PF00233.19 ORF149176 - 2.1e-41 142.2 8.4 2.1e-41 142.2 8.4 2.0 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase DUF3456 PF11938.8 ORF149176 - 0.35 11.4 2.4 0.54 10.8 2.4 1.3 1 0 0 1 1 1 0 TLR4 regulator and MIR-interacting MSAP HATPase_c PF02518.26 ORF148747 - 2e-22 79.8 0.1 3.3e-22 79.1 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EF-hand_2 PF09068.11 ORF148747 - 0.0017 18.5 0.9 0.0033 17.6 0.9 1.5 1 0 0 1 1 1 1 EF hand HATPase_c_3 PF13589.6 ORF148747 - 0.015 15.1 0.0 0.023 14.5 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KfrA_N PF11740.8 ORF148507 - 0.46 11.2 11.0 0.99 10.1 11.0 1.5 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term Asparaginase PF00710.20 ORF1470 - 1.5e-48 164.9 1.2 1.6e-48 164.8 0.3 1.5 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 ORF1470 - 2e-27 95.7 0.4 1.6e-26 92.8 0.1 2.1 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain Ion_trans PF00520.31 ORF143241 - 2.4e-05 23.7 12.5 3.6e-05 23.1 12.5 1.2 1 0 0 1 1 1 1 Ion transport protein RRS1 PF04939.12 ORF142654 - 0.027 14.3 7.0 0.042 13.7 7.0 1.4 1 1 0 1 1 1 0 Ribosome biogenesis regulatory protein (RRS1) Par3_HAL_N_term PF12053.8 ORF136737 - 0.092 13.0 0.2 11 6.3 0.0 3.4 2 2 2 4 4 4 0 N-terminal of Par3 and HAL proteins Tau95 PF09734.9 ORF135040 - 7.5e-17 62.4 0.1 1.3e-16 61.7 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain Tau95 PF09734.9 ORF132948 - 7.5e-17 62.4 0.1 1.3e-16 61.7 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain Pep_deformylase PF01327.21 ORF131964 - 9e-29 100.1 0.0 1.2e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 Polypeptide deformylase CLZ PF16526.5 ORF12543 - 0.027 14.8 0.1 0.056 13.8 0.1 1.5 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Syntaxin PF00804.25 ORF12543 - 4.7 6.8 11.6 1.1 8.9 0.7 2.3 2 0 0 2 2 2 0 Syntaxin DUF3385 PF11865.8 ORF124092 - 0.16 11.9 2.2 0.25 11.2 2.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) Zn_ribbon_17 PF17120.5 ORF122922 - 0.062 12.9 0.5 0.12 12.1 0.5 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type TMF_TATA_bd PF12325.8 ORF120121 - 0.019 15.2 3.4 0.019 15.2 3.4 2.3 3 0 0 3 3 3 0 TATA element modulatory factor 1 TATA binding adh_short_C2 PF13561.6 ORF109111 - 2.6e-58 197.3 0.0 3.6e-58 196.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF109111 - 2.7e-51 173.8 0.0 3.3e-51 173.5 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF109111 - 5.5e-08 32.9 0.2 1.7e-07 31.3 0.2 1.7 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF109111 - 0.00015 21.3 0.1 0.0082 15.6 0.1 2.2 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF109111 - 0.0016 17.9 0.0 0.54 9.6 0.0 2.1 2 0 0 2 2 2 2 GDP-mannose 4,6 dehydratase THF_DHG_CYH_C PF02882.19 ORF109111 - 0.01 15.2 0.0 0.025 13.9 0.0 1.8 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF1776 PF08643.10 ORF109111 - 0.084 12.2 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Rhomboid PF01694.22 ORF104948 - 9.2e-19 67.9 7.7 9.2e-19 67.9 7.7 1.5 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.10 ORF104948 - 3.3 8.3 9.4 0.14 12.7 1.3 2.6 2 1 0 3 3 3 0 Eukaryotic integral membrane protein (DUF1751) Jacalin PF01419.17 NODE_26950_length_794_cov_285.317523_g7054_i2reverse_frame_1 - 1.8e-10 40.8 0.9 2.1e-06 27.7 0.2 2.3 2 0 0 2 2 2 2 Jacalin-like lectin domain Fmp27_SW PF10305.9 NODE_26875_length_796_cov_73.360053_g21041_i0forward_frame_3 - 0.6 10.9 3.9 0.5 11.1 0.6 2.5 1 1 2 3 3 3 0 RNA pol II promoter Fmp27 protein domain Cellulose_synt PF03552.14 NODE_26875_length_796_cov_73.360053_g21041_i0forward_frame_3 - 6.1 5.2 7.2 7.9 4.8 7.2 1.1 1 0 0 1 1 1 0 Cellulose synthase ALMT PF11744.8 NODE_26875_length_796_cov_73.360053_g21041_i0forward_frame_3 - 8.3 5.1 12.7 10 4.8 12.7 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter PapC_C PF13953.6 NODE_26837_length_797_cov_2.917323_g21010_i0forward_frame_3 - 4.7e-17 61.5 0.0 7.8e-17 60.8 0.0 1.4 1 0 0 1 1 1 1 PapC C-terminal domain RTBV_P12 PF06361.11 NODE_26837_length_797_cov_2.917323_g21010_i0forward_frame_2 - 0.21 12.0 0.0 0.32 11.4 0.0 1.3 1 0 0 1 1 1 0 Rice tungro bacilliform virus P12 protein PKD_channel PF08016.12 NODE_26784_length_798_cov_69.541284_g20967_i0forward_frame_2 - 2.2e-11 43.1 0.3 2.9e-11 42.7 0.3 1.2 1 0 0 1 1 1 1 Polycystin cation channel Atu4866 PF11512.8 NODE_26784_length_798_cov_69.541284_g20967_i0forward_frame_2 - 0.16 12.4 0.1 0.35 11.3 0.1 1.5 1 0 0 1 1 1 0 Agrobacterium tumefaciens protein Atu4866 NEMP PF10225.9 NODE_26755_length_798_cov_431.045872_g20942_i0reverse_frame_2 - 0.0061 16.3 3.4 0.018 14.7 3.4 1.7 1 1 0 1 1 1 1 NEMP family NEMP PF10225.9 NODE_26752_length_798_cov_770.702490_g20940_i0reverse_frame_2 - 0.019 14.6 4.0 0.036 13.7 4.0 1.5 1 1 0 1 1 1 0 NEMP family ANAPC4_WD40 PF12894.7 ORF94583 - 3.2e-08 33.8 0.0 8e-06 26.1 0.0 2.4 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain RAB3GAP2_N PF14655.6 ORF94583 - 9.8e-05 21.8 0.7 0.026 13.8 0.1 3.0 1 1 2 3 3 3 2 Rab3 GTPase-activating protein regulatory subunit N-terminus BBS2_Mid PF14783.6 ORF94583 - 0.00095 19.2 0.1 0.042 13.9 0.0 2.4 2 0 0 2 2 2 1 Ciliary BBSome complex subunit 2, middle region Lactonase PF10282.9 ORF94583 - 0.0094 15.2 0.0 0.022 14.0 0.0 1.5 1 1 0 1 1 1 1 Lactonase, 7-bladed beta-propeller VID27 PF08553.10 ORF94583 - 0.017 14.2 0.0 0.025 13.7 0.0 1.2 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks76.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks76.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks76.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks76.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:45 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GST_N PF02798.20 ORF93328 - 1.5e-14 54.1 0.0 3.1e-14 53.1 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF93328 - 1.2e-13 51.1 0.1 4.9e-13 49.1 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF93328 - 7.8e-06 26.2 0.0 1.6e-05 25.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF93328 - 0.00011 22.4 0.0 0.00027 21.1 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF93328 - 0.00011 22.2 0.1 0.00022 21.2 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF93328 - 0.012 15.9 0.0 0.023 15.0 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Peptidase_C2 PF00648.21 ORF91715 - 7.8e-39 133.5 0.1 1.2e-38 132.9 0.1 1.3 1 1 0 1 1 1 1 Calpain family cysteine protease Prok-RING_4 PF14447.6 ORF86986 - 6 6.8 12.1 2.7 7.9 2.8 2.5 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 TRP PF06011.12 ORF86895 - 0.00053 18.8 23.0 0.00097 18.0 23.0 1.4 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel PRIMA1 PF16101.5 ORF86895 - 0.0027 17.7 1.0 0.0027 17.7 1.0 1.9 2 0 0 2 2 2 1 Proline-rich membrane anchor 1 Shisa PF13908.6 ORF86895 - 0.01 16.1 0.4 0.01 16.1 0.4 2.3 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator SPC22 PF04573.12 ORF86895 - 0.25 10.8 6.2 0.2 11.2 0.2 2.5 2 1 0 2 2 2 0 Signal peptidase subunit CD34_antigen PF06365.12 ORF86895 - 1.1 8.8 5.0 5.9 6.4 0.6 2.8 2 1 1 3 3 3 0 CD34/Podocalyxin family DUF4834 PF16118.5 ORF86895 - 1.7 9.7 0.0 1.7 9.7 0.0 3.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) DUF3377 PF11857.8 ORF86895 - 3.2 7.7 6.6 8.6 6.4 0.1 3.1 4 0 0 4 4 4 0 Domain of unknown function (DUF3377) SNARE PF05739.19 ORF85940 - 0.069 13.2 0.5 0.069 13.2 0.5 2.2 2 0 0 2 2 2 0 SNARE domain DUF3671 PF12420.8 ORF85940 - 0.19 11.8 14.9 0.29 11.2 8.0 2.2 2 0 0 2 2 2 0 Protein of unknown function DUF4181 PF13789.6 ORF85940 - 0.65 10.3 14.4 11 6.3 10.6 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4181) GlpM PF06942.12 ORF85940 - 1.3 9.5 10.5 0.066 13.6 1.3 2.7 1 1 2 3 3 3 0 GlpM protein EMP24_GP25L PF01105.24 ORF85940 - 1.3 8.9 5.5 5.3 6.9 0.5 2.4 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD DUF2569 PF10754.9 ORF85940 - 4 7.9 9.7 9.1 6.7 6.8 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2569) Pex2_Pex12 PF04757.14 ORF76798 - 1.3e-19 70.7 11.3 6.2e-17 62.0 11.3 2.0 1 1 0 1 1 1 1 Pex2 / Pex12 amino terminal region zf-RING_2 PF13639.6 ORF76798 - 4.9e-05 23.6 6.4 0.0001 22.6 6.4 1.6 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 ORF76798 - 6.8e-05 23.1 4.0 0.00012 22.2 4.0 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF76798 - 7.4e-05 22.5 7.6 0.00014 21.7 7.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF76798 - 0.00014 21.7 4.1 0.00032 20.5 4.2 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 ORF76798 - 0.00051 19.8 8.7 0.0029 17.4 8.5 2.2 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF76798 - 0.00059 19.8 8.9 0.0016 18.4 2.1 2.5 2 0 0 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF76798 - 0.00078 19.5 2.3 0.0015 18.6 2.3 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF76798 - 0.0047 16.9 7.5 0.016 15.2 7.7 1.8 1 1 1 2 2 2 1 zinc-RING finger domain FYVE PF01363.21 ORF76798 - 0.04 14.1 2.7 0.094 12.9 2.7 1.6 1 0 0 1 1 1 0 FYVE zinc finger zf-C3HC4_4 PF15227.6 ORF76798 - 0.071 13.3 6.8 0.17 12.0 6.8 1.8 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING RecR PF02132.15 ORF76798 - 0.18 11.4 2.2 4.6 6.9 0.2 2.6 2 0 0 2 2 2 0 RecR protein zf-MIZ PF02891.20 ORF76798 - 1.6 8.5 5.9 4.4 7.1 5.9 1.8 1 1 0 1 1 1 0 MIZ/SP-RING zinc finger CSN8_PSD8_EIF3K PF10075.9 ORF72185 - 1.8e-20 73.4 0.1 2.7e-20 72.8 0.1 1.2 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family SAC3_GANP PF03399.16 ORF72185 - 0.001 18.5 0.3 0.0015 18.0 0.3 1.2 1 0 0 1 1 1 1 SAC3/GANP family Chlam_OMP6 PF03504.13 ORF72185 - 0.095 13.0 0.1 0.26 11.6 0.1 1.7 1 0 0 1 1 1 0 Chlamydia cysteine-rich outer membrane protein 6 RabGAP-TBC PF00566.18 ORF61477 - 6.8e-38 130.5 4.5 9.7e-38 130.0 4.5 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF3091 PF11291.8 ORF60349 - 0.038 14.2 0.7 0.038 14.2 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3091) PHD PF00628.29 ORF55107 - 0.073 13.0 5.2 0.14 12.1 5.2 1.4 1 0 0 1 1 1 0 PHD-finger Tiam_CC_Ex PF18385.1 ORF55107 - 0.081 13.3 0.0 8.9 6.8 0.0 2.6 1 1 1 2 2 2 0 T-lymphoma invasion and metastasis CC-Ex domain Orn_Arg_deC_N PF02784.16 ORF55107 - 0.085 12.2 0.6 1.9 7.8 0.1 2.2 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FYVE_2 PF02318.16 ORF55107 - 0.15 12.3 4.4 0.18 12.0 2.8 2.0 2 0 0 2 2 2 0 FYVE-type zinc finger PCI PF01399.27 ORF55107 - 0.26 11.8 2.2 2.3 8.7 2.2 2.2 1 1 0 1 1 1 0 PCI domain fn3 PF00041.21 ORF53202 - 2e-24 85.7 0.0 3.6e-11 43.3 0.1 4.1 4 0 0 4 4 4 4 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 ORF53202 - 6e-09 36.4 0.0 0.0005 20.6 0.0 3.0 3 0 0 3 3 3 2 Purple acid Phosphatase, N-terminal domain DUF2369 PF10179.9 ORF53202 - 0.027 14.8 0.0 3.8 8.0 0.0 3.0 3 0 0 3 3 3 0 Uncharacterised conserved protein (DUF2369) Y_Y_Y PF07495.13 ORF53202 - 0.082 12.9 0.0 6.9 6.7 0.0 2.9 3 0 0 3 3 3 0 Y_Y_Y domain TT_ORF1 PF02956.14 ORF50546 - 3.6 6.1 10.9 4.2 5.9 10.9 1.1 1 0 0 1 1 1 0 TT viral orf 1 ubiquitin PF00240.23 ORF48885 - 5.3e-08 32.5 0.1 1.1e-07 31.4 0.1 1.6 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF48885 - 2.1e-05 24.3 0.1 4.6e-05 23.2 0.1 1.7 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407_C PF13373.6 ORF48885 - 0.00061 20.0 1.9 0.00079 19.6 0.0 2.0 2 1 0 2 2 2 1 DUF2407 C-terminal domain Rad60-SLD_2 PF13881.6 ORF48885 - 0.027 14.6 0.1 0.053 13.6 0.1 1.6 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF48885 - 0.034 14.5 0.9 0.077 13.4 0.2 2.0 1 1 1 2 2 2 0 Ubiquitin-like domain Wx5_PLAF3D7 PF09688.10 ORF48885 - 1.8 8.6 6.4 0.32 11.0 1.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (Wx5_PLAF3D7) MS_channel PF00924.18 ORF48545 - 1.5e-26 93.2 0.2 1.8e-26 93.0 0.2 1.0 1 0 0 1 1 1 1 Mechanosensitive ion channel GST_N_3 PF13417.6 ORF48106 - 0.00027 21.3 0.0 0.00057 20.2 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain KH_1 PF00013.29 ORF47779 - 1.4e-06 28.1 0.0 0.00013 21.8 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF47779 - 0.037 13.9 0.0 0.83 9.5 0.0 2.3 2 0 0 2 2 2 0 KH domain Hepatitis_core PF00906.20 ORF47779 - 5.3 6.5 8.6 7.6 6.0 8.6 1.3 1 0 0 1 1 1 0 Hepatitis core antigen Fe_bilin_red PF05996.12 ORF47581 - 0.16 11.6 0.0 2 8.0 0.0 2.1 2 0 0 2 2 2 0 Ferredoxin-dependent bilin reductase GST_N_3 PF13417.6 ORF42963 - 0.00027 21.3 0.0 0.00057 20.2 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain F5_F8_type_C PF00754.25 ORF42420 - 0.14 12.2 0.1 24 5.1 0.0 2.3 2 0 0 2 2 2 0 F5/8 type C domain MerR PF00376.23 ORF41872 - 0.02 14.6 0.1 0.037 13.8 0.1 1.4 1 0 0 1 1 1 0 MerR family regulatory protein Dak2 PF02734.17 ORF41662 - 0.0036 17.2 0.4 0.48 10.3 0.2 2.5 2 1 0 2 2 2 2 DAK2 domain DUF760 PF05542.11 ORF41662 - 0.0098 16.2 0.1 1.5 9.2 0.0 2.7 2 1 0 2 2 2 2 Protein of unknown function (DUF760) Sgf11_N PF18519.1 ORF36585 - 0.058 13.0 1.0 0.2 11.3 1.0 1.9 1 0 0 1 1 1 0 SAGA-associated factor 11 N-terminal domain Tiam_CC_Ex PF18385.1 ORF35787 - 0.068 13.6 0.1 9.4 6.7 0.0 2.7 2 1 1 3 3 3 0 T-lymphoma invasion and metastasis CC-Ex domain AATF-Che1 PF13339.6 ORF35787 - 0.19 12.4 1.8 0.24 12.1 0.9 1.7 2 0 0 2 2 2 0 Apoptosis antagonizing transcription factor ABC2_membrane_3 PF12698.7 ORF35787 - 0.29 10.2 0.9 0.35 9.9 0.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein IHO1 PF15771.5 ORF34154 - 0.28 9.9 2.4 0.39 9.4 2.4 1.2 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 GST_N_3 PF13417.6 ORF31756 - 0.00027 21.3 0.0 0.00057 20.2 0.0 1.6 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain FYVE PF01363.21 ORF30342 - 0.0079 16.3 18.1 0.0079 16.3 18.1 1.8 2 0 0 2 2 2 1 FYVE zinc finger PUB PF09409.10 ORF29477 - 5.1e-18 64.8 0.0 7.8e-18 64.2 0.0 1.3 1 0 0 1 1 1 1 PUB domain Suf PF05843.14 ORF29477 - 0.14 12.1 2.4 0.17 11.9 2.4 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) AAA_33 PF13671.6 ORF29477 - 0.74 10.0 4.3 0.66 10.1 0.2 2.1 1 1 1 2 2 2 0 AAA domain tRNA_synthFbeta PF17759.1 ORF29275 - 3.2e-36 124.8 0.0 3.9e-36 124.5 0.0 1.1 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 ORF29275 - 2e-10 40.8 0.1 7.1e-10 39.0 0.1 2.0 1 0 0 1 1 1 1 tRNA synthetase B5 domain tRNA-synt_2d PF01409.20 ORF29275 - 0.1 12.1 0.1 0.54 9.7 0.0 2.1 1 1 1 2 2 2 0 tRNA synthetases class II core domain (F) Aldo_ket_red PF00248.21 ORF27006 - 4.4e-35 121.3 0.0 5.5e-35 121.0 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family FYVE_2 PF02318.16 ORF24375 - 0.058 13.6 2.8 0.18 12.0 2.8 1.8 1 0 0 1 1 1 0 FYVE-type zinc finger PHD PF00628.29 ORF24375 - 0.073 13.0 5.2 0.14 12.1 5.2 1.4 1 0 0 1 1 1 0 PHD-finger Tiam_CC_Ex PF18385.1 ORF24375 - 0.073 13.5 0.0 8.1 6.9 0.0 2.6 1 1 1 2 2 2 0 T-lymphoma invasion and metastasis CC-Ex domain Orn_Arg_deC_N PF02784.16 ORF24375 - 0.075 12.4 0.6 1.9 7.8 0.1 2.2 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PCI PF01399.27 ORF24375 - 0.16 12.5 1.8 1.7 9.2 1.8 2.2 1 1 0 1 1 1 0 PCI domain GIDE PF12483.8 ORF24301 - 0.0003 20.2 0.0 0.00096 18.6 0.0 1.8 1 1 0 1 1 1 1 E3 Ubiquitin ligase BshC PF10079.9 ORF20972 - 0.063 12.0 5.4 0.039 12.7 3.7 1.4 2 0 0 2 2 2 0 Bacillithiol biosynthesis BshC PDE4_UCR PF18100.1 ORF20972 - 0.42 11.3 4.6 0.72 10.5 4.2 1.6 1 1 0 1 1 1 0 Phosphodiesterase 4 upstream conserved regions (UCR) DUF2937 PF11157.8 ORF19536 - 0.017 14.8 1.8 0.017 14.8 1.8 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2937) PPIP5K2_N PF18086.1 ORF19536 - 0.093 12.9 1.1 0.67 10.2 0.1 2.5 1 1 0 2 2 2 0 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain Bacillus_HBL PF05791.11 ORF19536 - 2.5 7.9 10.7 0.2 11.5 0.4 3.1 1 1 2 3 3 3 0 Bacillus haemolytic enterotoxin (HBL) Aldo_ket_red PF00248.21 ORF19153 - 4.5e-35 121.3 0.0 5.5e-35 121.0 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family zf-CCCH PF00642.24 ORF18521 - 2.5e-14 52.7 6.8 8.8e-07 28.7 0.8 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF18521 - 2.5e-08 33.7 15.1 2.1e-05 24.4 4.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF18521 - 4.6e-05 23.1 10.2 9.6e-05 22.1 2.7 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF18521 - 5.1e-05 23.9 5.7 9.6e-05 23.0 0.5 2.4 1 1 1 2 2 2 1 Torus domain zf-CCCH_2 PF14608.6 ORF18521 - 0.041 14.4 7.8 1.7 9.2 3.0 2.4 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Rsa3 PF14615.6 ORF18521 - 0.06 12.9 0.0 0.18 11.4 0.0 1.8 2 0 0 2 2 2 0 Ribosome-assembly protein 3 KH_1 PF00013.29 ORF150105 - 1.4e-06 28.1 0.0 0.00013 21.8 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF150105 - 0.037 13.9 0.0 0.83 9.5 0.0 2.3 2 0 0 2 2 2 0 KH domain Hepatitis_core PF00906.20 ORF150105 - 5.3 6.5 8.6 7.6 6.0 8.6 1.3 1 0 0 1 1 1 0 Hepatitis core antigen DNA_topoisoIV PF00521.20 ORF149999 - 0.021 13.8 0.4 0.025 13.5 0.4 1.2 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A MAM33 PF02330.16 ORF143265 - 5.8e-33 114.6 1.9 7.8e-33 114.2 1.9 1.2 1 0 0 1 1 1 1 Mitochondrial glycoprotein MRP-S27 PF10037.9 ORF143265 - 0.022 13.6 1.8 0.034 13.0 1.8 1.2 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 Prominin PF05478.11 ORF143265 - 0.23 9.3 2.4 0.3 9.0 2.4 1.1 1 0 0 1 1 1 0 Prominin SKA2 PF16740.5 ORF143061 - 0.02 14.6 0.8 0.02 14.6 0.8 2.6 3 0 0 3 3 3 0 Spindle and kinetochore-associated protein 2 CENP-F_leu_zip PF10473.9 ORF143061 - 0.021 14.9 1.3 0.021 14.9 1.3 2.3 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YabA PF06156.13 ORF143061 - 0.028 15.0 2.3 0.08 13.6 0.3 2.2 2 0 0 2 2 2 0 Initiation control protein YabA Csm1_N PF18504.1 ORF143061 - 0.03 14.7 8.2 0.21 11.9 2.4 2.6 2 0 0 2 2 2 0 Csm1 N-terminal domain Med30 PF11315.8 ORF143061 - 0.04 14.1 3.7 0.25 11.6 0.3 2.3 2 0 0 2 2 2 0 Mediator complex subunit 30 dCache_2 PF08269.11 ORF143061 - 0.053 12.7 0.3 0.11 11.7 0.3 1.4 1 0 0 1 1 1 0 Cache domain LXG PF04740.12 ORF143061 - 0.053 13.2 2.5 0.43 10.2 0.4 2.1 2 0 0 2 2 2 0 LXG domain of WXG superfamily SlyX PF04102.12 ORF143061 - 0.065 13.8 2.0 0.065 13.8 2.0 2.6 2 0 0 2 2 2 0 SlyX DUF5082 PF16888.5 ORF143061 - 0.066 13.5 1.1 0.066 13.5 1.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) GAS PF13851.6 ORF143061 - 0.13 11.6 7.6 0.12 11.7 1.3 2.2 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF16 PF01519.16 ORF143061 - 0.13 12.8 3.1 0.18 12.3 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function DUF16 TSC22 PF01166.18 ORF143061 - 0.44 10.9 2.8 0.63 10.4 0.5 2.4 2 1 1 3 3 2 0 TSC-22/dip/bun family Fmp27_WPPW PF10359.9 ORF143061 - 0.63 8.8 3.8 0.15 10.9 0.4 1.6 2 0 0 2 2 2 0 RNA pol II promoter Fmp27 protein domain FAM76 PF16046.5 ORF143061 - 0.96 8.7 5.4 0.35 10.2 0.1 2.1 2 0 0 2 2 2 0 FAM76 protein DUF4407 PF14362.6 ORF143061 - 1 8.6 8.3 1.1 8.6 2.8 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1664 PF07889.12 ORF143061 - 1.2 9.2 4.8 4.9 7.2 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 ORF143061 - 1.4 7.7 8.7 0.11 11.3 0.7 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein ZapB PF06005.12 ORF143061 - 2.3 8.7 11.2 0.23 11.9 2.7 2.5 2 1 0 2 2 2 0 Cell division protein ZapB DivIC PF04977.15 ORF143061 - 2.6 7.9 8.3 1.5 8.6 1.5 2.4 2 0 0 2 2 2 0 Septum formation initiator CENP-H PF05837.12 ORF143061 - 3 8.3 13.7 0.39 11.2 3.7 2.5 2 1 1 3 3 3 0 Centromere protein H (CENP-H) TMF_DNA_bd PF12329.8 ORF143061 - 3.9 7.6 9.9 0.32 11.0 2.3 2.4 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding FlxA PF14282.6 ORF143061 - 5.5 7.1 11.1 0.63 10.1 1.9 3.2 2 1 1 3 3 3 0 FlxA-like protein PseudoU_synth_2 PF00849.22 ORF138952 - 9.2e-17 61.6 0.0 2.3e-16 60.3 0.0 1.6 1 1 0 1 1 1 1 RNA pseudouridylate synthase DnaJ PF00226.31 ORF138408 - 3.6e-16 59.0 0.0 1.2e-15 57.3 0.0 1.8 2 0 0 2 2 2 1 DnaJ domain WRC PF08879.10 ORF136999 - 0.03 14.0 0.7 0.51 10.1 0.1 2.9 2 0 0 2 2 2 0 WRC KH_1 PF00013.29 ORF135808 - 1.4e-06 28.1 0.0 0.00013 21.8 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF135808 - 0.037 13.9 0.0 0.83 9.5 0.0 2.3 2 0 0 2 2 2 0 KH domain Hepatitis_core PF00906.20 ORF135808 - 5.3 6.5 8.6 7.6 6.0 8.6 1.3 1 0 0 1 1 1 0 Hepatitis core antigen FAD_binding_5 PF00941.21 ORF13453 - 9.6e-20 71.0 0.0 1.8e-19 70.1 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 ORF13453 - 2.2e-05 24.5 0.3 7.1e-05 22.9 0.3 1.9 1 1 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Pkinase PF00069.25 ORF129033 - 6.9e-60 202.6 0.2 8.4e-60 202.4 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF129033 - 5.7e-37 127.4 0.0 7.1e-37 127.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF129033 - 0.00024 20.5 0.0 0.00038 19.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF129033 - 0.0024 17.3 0.0 0.0045 16.3 0.0 1.6 1 1 1 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 ORF129033 - 0.0038 16.2 0.3 0.0052 15.8 0.3 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF129033 - 0.028 13.2 0.0 0.037 12.8 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase KH_1 PF00013.29 ORF126858 - 1.4e-06 28.1 0.0 0.00013 21.8 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF126858 - 0.037 13.9 0.0 0.83 9.5 0.0 2.3 2 0 0 2 2 2 0 KH domain Hepatitis_core PF00906.20 ORF126858 - 5.3 6.5 8.6 7.6 6.0 8.6 1.3 1 0 0 1 1 1 0 Hepatitis core antigen Iso_dh PF00180.20 ORF121984 - 0.11 11.6 0.7 0.49 9.5 0.2 1.9 2 0 0 2 2 2 0 Isocitrate/isopropylmalate dehydrogenase Tiam_CC_Ex PF18385.1 ORF121495 - 0.093 13.1 0.0 9.4 6.7 0.0 2.4 1 1 1 2 2 2 0 T-lymphoma invasion and metastasis CC-Ex domain AATF-Che1 PF13339.6 ORF121495 - 0.22 12.2 1.8 0.25 12.0 0.9 1.6 2 0 0 2 2 2 0 Apoptosis antagonizing transcription factor ABC2_membrane_3 PF12698.7 ORF121495 - 0.29 10.2 0.9 0.35 9.9 0.9 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein PHD PF00628.29 ORF121495 - 0.49 10.3 6.9 0.97 9.4 6.9 1.5 1 0 0 1 1 1 0 PHD-finger Stc1 PF12898.7 ORF121347 - 0.0017 18.8 0.6 2 9.0 0.4 3.5 1 1 1 2 2 2 2 Stc1 domain zf-CCCH PF00642.24 ORF119037 - 2.5e-14 52.7 6.8 8.8e-07 28.7 0.8 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF119037 - 2.5e-08 33.7 15.1 2.1e-05 24.4 4.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF119037 - 4.6e-05 23.1 10.2 9.6e-05 22.1 2.7 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF119037 - 5.1e-05 23.9 5.7 9.6e-05 23.0 0.5 2.4 1 1 1 2 2 2 1 Torus domain zf-CCCH_2 PF14608.6 ORF119037 - 0.041 14.4 7.8 1.7 9.2 3.0 2.4 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Rsa3 PF14615.6 ORF119037 - 0.06 12.9 0.0 0.18 11.4 0.0 1.8 2 0 0 2 2 2 0 Ribosome-assembly protein 3 TerC PF03741.16 ORF118611 - 4.8e-52 176.3 15.2 6.3e-52 175.9 15.2 1.1 1 0 0 1 1 1 1 Integral membrane protein TerC family zf-C2H2_aberr PF17017.5 ORF116402 - 0.99 9.5 12.8 0.18 11.9 6.8 2.2 1 1 1 2 2 2 0 Aberrant zinc-finger DeoRC PF00455.22 ORF116036 - 3.3e-51 173.4 0.5 5.9e-51 172.6 0.5 1.4 1 0 0 1 1 1 1 DeoR C terminal sensor domain HTH_DeoR PF08220.12 ORF116036 - 1e-16 60.4 0.4 2.5e-16 59.2 0.4 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 ORF116036 - 1.4e-09 37.7 0.2 3.3e-09 36.6 0.2 1.6 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 ORF116036 - 5.3e-05 22.8 1.4 7.7e-05 22.3 0.3 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 ORF116036 - 0.00068 19.5 0.1 0.0021 17.9 0.1 1.8 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 ORF116036 - 0.00086 18.8 0.2 0.0047 16.5 0.2 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 ORF116036 - 0.0018 18.6 0.1 0.0038 17.6 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 ORF116036 - 0.0028 17.8 0.2 0.006 16.8 0.2 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 ORF116036 - 0.0051 16.7 0.1 0.015 15.2 0.1 1.8 1 0 0 1 1 1 1 MarR family HTH_28 PF13518.6 ORF116036 - 0.01 16.0 0.0 0.024 14.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_6 PF01418.17 ORF116036 - 0.012 15.6 0.0 2.4 8.2 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family E3_UFM1_ligase PF09743.9 ORF116036 - 0.012 15.2 0.3 0.099 12.2 0.1 2.0 2 0 0 2 2 2 0 E3 UFM1-protein ligase 1 HTH_23 PF13384.6 ORF116036 - 0.013 15.3 0.1 0.034 13.9 0.1 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_20 PF12840.7 ORF116036 - 0.013 15.5 2.1 0.034 14.2 0.1 2.5 3 0 0 3 3 2 0 Helix-turn-helix domain DDRGK PF09756.9 ORF116036 - 0.027 14.1 0.1 0.039 13.5 0.1 1.2 1 0 0 1 1 1 0 DDRGK domain Put_DNA-bind_N PF06971.13 ORF116036 - 0.034 14.2 0.1 0.071 13.1 0.1 1.5 1 0 0 1 1 1 0 Putative DNA-binding protein N-terminus RraA-like PF03737.15 ORF116036 - 0.042 14.0 1.3 2.9 8.1 0.2 3.3 1 1 0 2 2 2 0 Aldolase/RraA HTH_38 PF13936.6 ORF116036 - 0.061 13.1 0.2 0.18 11.6 0.2 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Ribosomal_S25 PF03297.15 ORF116036 - 0.062 13.5 0.2 0.13 12.5 0.2 1.6 1 0 0 1 1 1 0 S25 ribosomal protein HTH_5 PF01022.20 ORF116036 - 0.068 13.0 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_36 PF13730.6 ORF116036 - 0.081 12.9 0.0 0.34 10.9 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain FeoC PF09012.10 ORF116036 - 0.16 12.1 0.1 1.1 9.4 0.1 2.2 2 0 0 2 2 2 0 FeoC like transcriptional regulator zf-C2H2_aberr PF17017.5 ORF114435 - 1 9.5 12.5 0.14 12.3 5.6 2.2 1 1 1 2 2 2 0 Aberrant zinc-finger V-ATPase_H_C PF11698.8 ORF114435 - 4 7.6 9.7 11 6.2 0.2 3.2 1 1 1 3 3 3 0 V-ATPase subunit H Hid1 PF12722.7 ORF112047 - 0.089 10.9 9.6 0.097 10.8 9.6 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Neur_chan_memb PF02932.16 ORF112047 - 2.3 8.2 12.7 3.4 7.6 12.7 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region GREB1 PF15782.5 ORF112047 - 2.7 5.0 9.4 3.2 4.7 9.4 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer PARP PF00644.20 ORF110874 - 2e-13 50.4 0.3 3.5e-12 46.3 0.3 2.1 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Mt_ATP-synt_B PF05405.14 ORF109073 - 0.91 9.1 6.6 5.5 6.6 0.2 2.4 2 0 0 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) zf-C2H2_aberr PF17017.5 ORF108413 - 1 9.5 12.5 0.14 12.3 5.6 2.2 1 1 1 2 2 2 0 Aberrant zinc-finger V-ATPase_H_C PF11698.8 ORF108413 - 4 7.6 9.7 11 6.2 0.2 3.2 1 1 1 3 3 3 0 V-ATPase subunit H zf-RING_2 PF13639.6 ORF107132 - 7e-13 48.7 10.7 1.6e-12 47.6 10.7 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF107132 - 9.6e-08 31.6 8.6 9.6e-08 31.6 8.6 2.6 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF107132 - 1.5e-07 31.1 9.1 3.3e-07 30.0 9.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF107132 - 3.6e-07 30.4 10.9 1.2e-06 28.7 10.9 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF107132 - 9.2e-07 28.6 7.1 1.7e-06 27.8 7.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF107132 - 2.3e-06 27.4 10.6 5e-06 26.3 10.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF107132 - 7.6e-05 22.6 9.7 0.00015 21.7 9.7 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF107132 - 0.00015 21.7 4.5 0.0002 21.3 2.1 2.4 1 1 1 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF107132 - 0.00041 20.3 5.7 0.00092 19.2 5.7 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Baculo_RING PF05883.11 ORF107132 - 0.003 17.5 0.9 0.0058 16.6 0.9 1.6 1 0 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4_4 PF15227.6 ORF107132 - 0.059 13.5 5.1 0.26 11.5 5.3 2.1 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 ORF107132 - 0.097 12.9 9.8 0.58 10.4 9.9 2.2 1 1 1 2 2 2 0 FANCL C-terminal domain CEBP_ZZ PF16366.5 ORF107132 - 0.16 12.2 6.6 0.48 10.7 6.6 1.8 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain RINGv PF12906.7 ORF107132 - 0.17 12.1 10.5 0.31 11.2 10.5 1.5 1 0 0 1 1 1 0 RING-variant domain Prok-RING_4 PF14447.6 ORF107132 - 0.38 10.6 7.6 0.94 9.4 7.6 1.7 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 ORF107132 - 0.94 9.3 7.8 2 8.2 7.8 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Zn_ribbon_17 PF17120.5 ORF107132 - 0.96 9.1 7.3 1.8 8.2 7.3 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-CCCH PF00642.24 ORF106906 - 2.5e-14 52.7 6.8 8.8e-07 28.7 0.8 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF106906 - 2.5e-08 33.7 15.1 2.1e-05 24.4 4.1 2.5 2 0 0 2 2 2 2 Zinc finger domain zf-CCCH_4 PF18044.1 ORF106906 - 4.6e-05 23.1 10.2 9.6e-05 22.1 2.7 2.6 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF106906 - 5.1e-05 23.9 5.7 9.6e-05 23.0 0.5 2.4 1 1 1 2 2 2 1 Torus domain zf-CCCH_2 PF14608.6 ORF106906 - 0.041 14.4 7.8 1.7 9.2 3.0 2.4 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Rsa3 PF14615.6 ORF106906 - 0.06 12.9 0.0 0.18 11.4 0.0 1.8 2 0 0 2 2 2 0 Ribosome-assembly protein 3 GRP PF07172.11 ORF104013 - 0.33 11.7 9.2 0.81 10.4 9.2 1.6 1 0 0 1 1 1 0 Glycine rich protein family CCDC14 PF15254.6 NODE_27086_length_790_cov_897.207947_g21214_i0forward_frame_1 - 0.067 11.8 2.0 0.07 11.8 2.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 Lzipper-MIP1 PF14389.6 NODE_27067_length_791_cov_214.974868_g21196_i0reverse_frame_1 - 0.013 15.8 6.4 0.16 12.3 0.6 2.6 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 RDM PF11002.8 NODE_27067_length_791_cov_214.974868_g21196_i0reverse_frame_1 - 0.03 14.3 2.2 5.5 7.1 0.2 2.4 2 0 0 2 2 2 0 RFPL defining motif (RDM) Pox_A_type_inc PF04508.12 NODE_27067_length_791_cov_214.974868_g21196_i0reverse_frame_1 - 0.052 13.4 3.0 5 7.1 0.3 2.7 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat PKcGMP_CC PF16808.5 NODE_27067_length_791_cov_214.974868_g21196_i0reverse_frame_1 - 0.085 12.7 5.6 2.4 8.1 1.0 2.6 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Rab5-bind PF09311.11 NODE_27067_length_791_cov_214.974868_g21196_i0reverse_frame_1 - 0.15 11.4 3.4 0.58 9.5 0.4 2.0 2 0 0 2 2 2 0 Rabaptin-like protein BBP1_C PF15272.6 NODE_27067_length_791_cov_214.974868_g21196_i0reverse_frame_1 - 0.19 11.6 0.3 16 5.3 0.1 2.1 2 0 0 2 2 2 0 Spindle pole body component BBP1, C-terminal DHHA1 PF02272.19 NODE_27067_length_791_cov_214.974868_g21196_i0reverse_frame_1 - 0.51 10.7 3.0 2.7 8.4 0.2 2.2 2 0 0 2 2 2 0 DHHA1 domain V-ATPase_G_2 PF16999.5 NODE_27067_length_791_cov_214.974868_g21196_i0reverse_frame_1 - 0.88 10.0 19.0 0.15 12.5 6.2 2.3 2 0 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit DUF4570 PF15134.6 NODE_27067_length_791_cov_214.974868_g21196_i0reverse_frame_1 - 1.1 9.3 4.7 5.9 7.0 0.3 3.1 2 1 0 3 3 3 0 Domain of unknown function (DUF4570) Bac_globin PF01152.21 NODE_27067_length_791_cov_214.974868_g21196_i0forward_frame_1 - 0.011 15.9 0.1 5 7.3 0.0 2.2 2 0 0 2 2 2 0 Bacterial-like globin DUF2384 PF09722.10 NODE_27067_length_791_cov_214.974868_g21196_i0forward_frame_1 - 0.04 14.0 1.0 0.15 12.2 0.1 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2384) ApoO PF09769.9 NODE_27012_length_793_cov_122.126649_g21152_i0reverse_frame_3 - 0.079 12.9 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Apolipoprotein O YqaJ PF09588.10 NODE_27012_length_793_cov_122.126649_g21152_i0forward_frame_3 - 0.018 15.2 0.0 0.049 13.8 0.0 1.7 1 1 0 1 1 1 0 YqaJ-like viral recombinase domain COX8 PF02285.15 NODE_26988_length_793_cov_616.753298_g21129_i0forward_frame_3 - 1 9.3 47.0 7.8 6.5 0.4 10.1 6 2 2 9 9 9 0 Cytochrome oxidase c subunit VIII DUF1622 PF07784.11 NODE_26950_length_794_cov_285.317523_g7054_i2reverse_frame_2 - 0.0083 16.0 0.2 0.026 14.4 0.2 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) Ax_dynein_light PF10211.9 ORF9890 - 0.0087 16.0 1.8 0.0087 16.0 1.8 2.3 2 1 0 2 2 2 1 Axonemal dynein light chain DUF641 PF04859.12 ORF9890 - 0.11 12.9 6.9 0.12 12.7 1.1 2.3 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) DUF4407 PF14362.6 ORF9890 - 0.25 10.7 3.6 0.76 9.1 1.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) ADIP PF11559.8 ORF9890 - 0.61 10.2 8.4 0.18 11.9 2.5 2.2 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Tup_N PF08581.10 ORF9890 - 1.2 9.5 9.8 1.4 9.3 2.1 2.4 2 0 0 2 2 2 0 Tup N-terminal SlyX PF04102.12 ORF9890 - 1.2 9.8 5.6 8.3 7.1 0.9 3.1 3 0 0 3 3 3 0 SlyX bZIP_1 PF00170.21 ORF9890 - 1.9 8.6 20.9 0.061 13.4 6.6 3.2 2 1 1 3 3 3 0 bZIP transcription factor APG6_N PF17675.1 ORF9890 - 2.2 8.8 13.7 0.21 12.1 5.3 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region DUF5595 PF18077.1 ORF9890 - 2.9 8.0 8.0 18 5.5 2.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5595) YabA PF06156.13 ORF9890 - 4.1 8.1 6.6 14 6.4 1.5 2.6 2 1 1 3 3 3 0 Initiation control protein YabA DUF4140 PF13600.6 ORF9890 - 4.7 7.7 6.2 3.5 8.1 2.2 2.4 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Pkinase PF00069.25 ORF94976 - 5.1e-40 137.5 0.0 6.8e-40 137.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF94976 - 1.5e-16 60.4 0.0 6.6e-16 58.4 0.0 1.9 1 1 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF94976 - 0.0053 16.7 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 ORF94976 - 0.016 14.1 0.0 0.024 13.6 0.0 1.3 1 0 0 1 1 1 0 Haspin like kinase domain DUF1318 PF07027.12 ORF9472 - 0.071 13.6 3.4 3.2 8.3 0.1 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1318) DUF4692 PF15763.5 ORF9472 - 2.1 8.8 15.2 0.33 11.4 10.9 1.9 2 1 1 3 3 3 0 Regulator of human erythroid cell expansion (RHEX) PROL5-SMR PF15621.6 ORF91699 - 0.27 11.8 3.3 0.86 10.2 3.3 1.9 1 1 0 1 1 1 0 Proline-rich submaxillary gland androgen-regulated family Homeodomain PF00046.29 ORF89870 - 0.0001 22.1 1.6 0.00023 20.9 1.6 1.6 1 0 0 1 1 1 1 Homeodomain YdaS_antitoxin PF15943.5 ORF89870 - 0.19 11.7 0.0 0.33 10.8 0.0 1.3 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT FKBP_N PF01346.18 ORF89870 - 0.21 12.6 6.0 0.25 12.3 1.5 2.3 2 0 0 2 2 2 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DAGK_cat PF00781.24 ORF88219 - 7e-22 77.4 0.0 1.2e-21 76.7 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain HlyC PF02794.16 ORF88024 - 0.088 12.7 0.0 0.17 11.8 0.0 1.5 1 0 0 1 1 1 0 RTX toxin acyltransferase family Clp_N PF02861.20 ORF87668 - 0.069 13.3 1.4 0.1 12.8 0.2 1.9 2 0 0 2 2 2 0 Clp amino terminal domain, pathogenicity island component DUF643 PF04867.12 ORF87668 - 0.073 13.7 1.3 0.16 12.6 0.2 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF643) MMR_HSR1_Xtn PF16897.5 ORF87668 - 0.086 12.9 2.7 0.33 11.0 1.7 2.3 1 1 1 2 2 2 0 C-terminal region of MMR_HSR1 domain CLASP_N PF12348.8 ORF85392 - 0.00042 19.9 2.2 0.0026 17.4 0.3 2.5 1 1 1 2 2 2 2 CLASP N terminal Metallophos PF00149.28 ORF82161 - 8.6e-05 23.1 1.1 0.00016 22.2 0.6 1.7 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase PAN_4 PF14295.6 ORF80434 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain DAGK_cat PF00781.24 ORF76166 - 7e-22 77.4 0.0 1.2e-21 76.7 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain FKBP_C PF00254.28 ORF75229 - 4.9e-27 94.1 0.0 7.7e-27 93.5 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF1356 PF07092.12 ORF75229 - 0.023 14.0 0.6 0.23 10.7 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1356) MscS_TM PF12794.7 ORF75229 - 0.082 11.8 0.2 0.41 9.5 0.1 1.8 2 0 0 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 EpsG PF14897.6 ORF75229 - 0.13 11.6 1.6 9.2 5.5 0.5 2.1 2 0 0 2 2 2 0 EpsG family DUF4173 PF13777.6 ORF75229 - 0.48 9.8 5.8 2 7.8 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4173) Methyltransf_11 PF08241.12 ORF70793 - 2.1e-23 82.8 0.0 4.2e-23 81.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF70793 - 3.7e-19 69.2 0.0 1e-18 67.8 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF70793 - 2.2e-13 50.3 0.0 3.2e-13 49.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF70793 - 1.2e-12 47.9 0.1 1.9e-12 47.4 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF70793 - 1.8e-10 41.5 0.0 4e-10 40.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF70793 - 7.4e-08 32.0 0.0 9.2e-08 31.7 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 ORF70793 - 0.00014 21.8 0.0 0.00021 21.2 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.14 ORF70793 - 0.00074 19.1 0.0 0.0012 18.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 ORF70793 - 0.02 14.5 0.0 0.029 13.9 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW NodS PF05401.11 ORF70793 - 0.033 13.8 0.0 0.061 12.9 0.0 1.4 1 1 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_29 PF03141.16 ORF70793 - 0.04 12.5 0.0 0.063 11.8 0.0 1.3 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase CMAS PF02353.20 ORF70793 - 0.046 13.0 0.0 0.092 12.0 0.0 1.4 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase DREV PF05219.12 ORF70793 - 0.072 12.2 0.0 0.089 11.9 0.0 1.1 1 0 0 1 1 1 0 DREV methyltransferase DUF4262 PF14081.6 ORF70793 - 0.1 12.8 0.2 2.2 8.5 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4262) RrnaAD PF00398.20 ORF70793 - 0.17 10.9 0.0 0.24 10.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase GED PF02212.18 ORF68062 - 0.02 15.1 0.1 0.02 15.1 0.1 2.5 3 1 0 3 3 3 0 Dynamin GTPase effector domain YojJ PF10372.9 ORF68062 - 0.039 14.0 1.9 0.35 11.0 0.2 3.2 1 1 2 3 3 3 0 Bacterial membrane-spanning protein N-terminus DUF4320 PF14208.6 ORF68062 - 0.083 13.0 1.6 0.2 11.7 1.6 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4320) Peptidase_M41 PF01434.18 ORF68062 - 0.23 11.3 6.3 2.9 7.7 0.3 2.3 2 0 0 2 2 2 0 Peptidase family M41 TBCC_N PF16752.5 ORF68062 - 0.41 11.1 10.9 0.22 12.0 4.3 2.9 2 1 1 3 3 3 0 Tubulin-specific chaperone C N-terminal domain XhlA PF10779.9 ORF68062 - 0.46 10.7 0.1 0.46 10.7 0.1 2.5 3 0 0 3 3 3 0 Haemolysin XhlA PCI PF01399.27 ORF68062 - 2.8 8.5 8.9 1.1 9.8 0.5 2.6 1 1 0 2 2 2 0 PCI domain IZUMO PF15005.6 ORF68062 - 4.9 7.7 7.6 2.6 8.6 4.4 2.2 1 1 2 3 3 3 0 Izumo sperm-egg fusion, Ig domain-associated NYD-SP28_assoc PF14775.6 ORF65294 - 0.26 11.4 2.4 0.74 10.0 2.4 1.8 1 0 0 1 1 1 0 Sperm tail C-terminal domain Whib PF02467.16 ORF6496 - 3.1 8.4 7.1 4.8 7.9 0.9 2.7 1 1 1 2 2 2 0 Transcription factor WhiB NS3_envE PF02723.14 ORF63126 - 0.13 12.4 3.2 0.51 10.5 0.9 2.3 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E FtsK_SpoIIIE PF01580.18 ORF62552 - 0.032 13.6 0.0 0.068 12.5 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family MyTH4 PF00784.17 ORF62552 - 4.9 7.7 9.6 37 4.9 0.1 3.7 4 1 0 4 4 4 0 MyTH4 domain F_actin_cap_B PF01115.17 ORF58069 - 1.8e-66 224.2 0.3 2.1e-66 224.0 0.3 1.0 1 0 0 1 1 1 1 F-actin capping protein, beta subunit DAGK_cat PF00781.24 ORF56156 - 7e-22 77.4 0.0 1.2e-21 76.7 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain SpoIIE PF07228.12 ORF55756 - 2.2e-15 57.1 0.0 2.7e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) PP2C PF00481.21 ORF55756 - 1.6e-10 41.1 0.2 0.00013 21.7 0.0 2.2 2 0 0 2 2 2 2 Protein phosphatase 2C PP2C_2 PF13672.6 ORF55756 - 4.5e-05 23.2 0.0 7.2e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Protein phosphatase 2C RabGAP-TBC PF00566.18 ORF54248 - 1e-37 129.9 8.6 1.8e-37 129.1 8.6 1.4 1 0 0 1 1 1 1 Rab-GTPase-TBC domain TatD_DNase PF01026.21 ORF43515 - 2.1e-70 237.0 0.0 2.4e-70 236.8 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase DRTGG PF07085.12 ORF43515 - 0.043 13.6 0.0 0.13 12.0 0.0 1.8 1 0 0 1 1 1 0 DRTGG domain PGAP1 PF07819.13 ORF40546 - 0.13 12.0 2.6 0.072 12.8 0.3 1.7 2 0 0 2 2 2 0 PGAP1-like protein Gly_radical PF01228.21 ORF40546 - 0.19 12.3 5.1 0.096 13.2 2.0 2.1 1 1 0 2 2 2 0 Glycine radical Elf1 PF05129.13 ORF36042 - 0.0013 18.7 0.2 0.0013 18.7 0.2 2.1 1 1 1 2 2 2 1 Transcription elongation factor Elf1 like Unstab_antitox PF09720.10 ORF36004 - 0.0095 16.0 0.2 7.6 6.7 0.1 3.0 1 1 1 2 2 2 0 Putative addiction module component DUF2959 PF11172.8 ORF36004 - 0.011 15.9 1.8 0.011 15.9 1.8 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2959) DUF4618 PF15397.6 ORF36004 - 0.13 11.7 20.4 0.14 11.6 7.8 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) DUF1664 PF07889.12 ORF36004 - 0.18 11.8 15.2 0.98 9.5 1.7 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 ORF36004 - 0.31 10.3 20.6 0.36 10.1 3.5 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) SKA1 PF07160.12 ORF36004 - 0.39 10.5 16.0 0.44 10.3 2.8 2.5 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 DUF4140 PF13600.6 ORF36004 - 0.4 11.1 0.2 0.4 11.1 0.2 3.7 2 1 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) DUF4988 PF16378.5 ORF36004 - 0.76 9.4 11.0 2.9 7.5 0.2 3.2 3 0 0 3 3 3 0 Domain of unknown function XhlA PF10779.9 ORF36004 - 0.92 9.8 16.9 0.18 12.0 2.7 3.8 3 1 1 4 4 4 0 Haemolysin XhlA DivIC PF04977.15 ORF36004 - 0.98 9.2 18.3 0.26 11.1 2.5 3.7 3 0 0 3 3 3 0 Septum formation initiator Spc7 PF08317.11 ORF36004 - 1.3 7.8 22.9 0.72 8.7 2.5 2.5 1 1 0 2 2 2 0 Spc7 kinetochore protein DivIVA PF05103.13 ORF36004 - 1.4 9.0 18.3 2.6 8.1 7.9 3.3 2 2 1 3 3 3 0 DivIVA protein FliD_C PF07195.12 ORF36004 - 1.4 8.2 14.3 5.9 6.2 3.8 2.8 1 1 0 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Prominin PF05478.11 ORF36004 - 2.1 6.2 15.9 0.38 8.6 7.5 2.0 1 1 1 2 2 2 0 Prominin Csm1_N PF18504.1 ORF36004 - 2.4 8.5 21.2 0.44 10.9 1.5 4.1 4 1 1 5 5 4 0 Csm1 N-terminal domain DUF948 PF06103.11 ORF36004 - 2.4 8.5 7.5 1.8 8.9 0.2 3.3 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF948) bZIP_1 PF00170.21 ORF36004 - 2.9 8.1 13.3 1.3 9.1 0.5 4.2 3 1 1 4 4 4 0 bZIP transcription factor DUF4407 PF14362.6 ORF36004 - 3.1 7.0 15.7 19 4.5 6.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) TMF_TATA_bd PF12325.8 ORF36004 - 4 7.7 22.2 3 8.1 8.1 2.9 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding HemX PF04375.14 ORF36004 - 4.2 6.6 15.2 2.3 7.4 5.6 2.2 1 1 0 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase Jnk-SapK_ap_N PF09744.9 ORF36004 - 6.7 6.9 24.2 6.6 6.9 5.3 3.4 1 1 3 4 4 4 0 JNK_SAPK-associated protein-1 ZapB PF06005.12 ORF36004 - 8 7.0 17.6 1.2 9.6 1.4 3.4 3 1 0 3 3 3 0 Cell division protein ZapB FlaC_arch PF05377.11 ORF36004 - 8.4 6.9 15.5 4.6 7.7 0.5 4.8 3 3 1 4 4 4 0 Flagella accessory protein C (FlaC) DLP_helical PF18709.1 ORF36004 - 9.4 5.3 17.2 0.18 11.0 5.5 2.6 1 1 2 3 3 3 0 Dynamin-like helical domain UPF0242 PF06785.11 ORF36004 - 9.6 6.3 26.7 14 5.7 11.3 2.5 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus SOR_SNZ PF01680.17 ORF35113 - 6.2e-59 199.3 2.9 8.6e-59 198.8 2.9 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 ORF35113 - 0.014 14.7 0.1 0.018 14.4 0.1 1.1 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG Fer4_4 PF12800.7 ORF35113 - 7.2 7.4 8.0 10 6.9 1.5 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain PI3_PI4_kinase PF00454.27 ORF345 - 5.9e-26 91.8 0.3 5.9e-26 91.8 0.3 2.0 1 1 1 2 2 2 1 Phosphatidylinositol 3- and 4-kinase Bowman-Birk_leg PF00228.20 ORF31228 - 6.5 7.3 27.1 0.47 10.9 0.5 5.3 5 0 0 5 5 5 0 Bowman-Birk serine protease inhibitor family FYTT PF07078.11 ORF28382 - 0.0082 15.5 3.4 0.012 15.0 3.4 1.2 1 0 0 1 1 1 1 Forty-two-three protein PAN_4 PF14295.6 ORF26700 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain ECH_1 PF00378.20 ORF25611 - 5.8e-22 78.2 0.0 7.4e-22 77.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF25611 - 0.0025 17.3 0.1 0.0037 16.8 0.1 1.4 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Carboxyl_trans PF01039.22 ORF25611 - 0.012 14.3 0.0 0.016 13.9 0.0 1.2 1 0 0 1 1 1 0 Carboxyl transferase domain Mur_ligase_C PF02875.21 ORF2127 - 2.4e-20 72.5 0.0 6.2e-20 71.3 0.0 1.7 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase_M PF08245.12 ORF2127 - 2.2e-06 27.8 0.0 3.3e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain CLP_protease PF00574.23 ORF20831 - 1.7e-44 151.9 0.0 2.1e-44 151.6 0.0 1.0 1 0 0 1 1 1 1 Clp protease DUF3283 PF11686.8 ORF17402 - 0.2 11.5 0.5 25 4.8 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3283) PAN_4 PF14295.6 ORF16760 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain Phage_BR0599 PF09356.10 ORF149981 - 0.00022 21.5 8.7 22 5.5 0.0 5.9 5 1 1 6 6 6 1 Phage conserved hypothetical protein BR0599 Cys_Knot_tox PF17486.2 ORF149981 - 0.065 13.5 10.2 15 5.9 0.1 4.5 5 0 0 5 5 5 0 Cystine knot toxins EB PF01683.18 ORF149981 - 0.16 12.3 4.3 54 4.2 0.0 3.7 4 0 0 4 4 4 0 EB module Integrase_Zn PF02022.19 ORF149981 - 0.2 11.7 3.8 7.3 6.6 0.1 4.0 4 0 0 4 4 4 0 Integrase Zinc binding domain DX PF01666.17 ORF149981 - 0.27 11.7 4.3 42 4.7 0.0 3.7 3 1 0 3 3 3 0 DX module LRV_FeS PF05484.11 ORF149981 - 2.6 8.1 6.1 32 4.6 0.0 3.3 3 0 0 3 3 3 0 LRV protein FeS4 cluster DAGK_cat PF00781.24 ORF148290 - 2.4e-21 75.6 0.0 3.9e-21 75.0 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Cna_B PF05738.13 ORF148290 - 0.11 13.0 0.3 0.26 11.9 0.3 1.6 1 1 0 1 1 1 0 Cna protein B-type domain RCC1_2 PF13540.6 ORF146613 - 3.4e-21 74.5 12.0 0.0019 17.9 0.1 6.3 6 0 0 6 6 6 6 Regulator of chromosome condensation (RCC1) repeat Spectrin PF00435.21 ORF146613 - 0.0018 18.8 0.0 0.57 10.7 0.0 3.6 4 1 0 4 4 4 1 Spectrin repeat FtsQ PF03799.15 ORF146613 - 0.02 15.7 0.1 44 4.9 0.1 3.7 2 1 2 4 4 4 0 Cell division protein FtsQ PH_TFIIH PF08567.11 ORF146613 - 0.15 12.4 3.2 13 6.2 0.0 3.8 3 2 2 5 5 5 0 TFIIH p62 subunit, N-terminal domain PKD PF00801.20 ORF146613 - 7.3 6.5 9.6 17 5.4 0.0 4.9 5 1 1 6 6 6 0 PKD domain Peptidase_M24 PF00557.24 ORF146447 - 3.4e-54 183.7 0.3 3.8e-54 183.5 0.3 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 CBM39 PF15886.5 ORF146447 - 0.032 14.1 0.0 3.9 7.4 0.0 2.3 2 0 0 2 2 2 0 Carbohydrate binding domain (family 32) Phage_holin_3_6 PF07332.11 ORF146202 - 0.012 15.6 4.5 0.37 10.8 0.6 2.3 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III HD_assoc PF13286.6 ORF146202 - 0.034 14.7 0.6 0.084 13.4 0.2 1.8 2 0 0 2 2 2 0 Phosphohydrolase-associated domain ApoO PF09769.9 ORF146202 - 0.048 13.6 0.1 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 Apolipoprotein O DUF885 PF05960.11 ORF146202 - 0.09 12.4 0.3 0.14 11.8 0.3 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) DUF4211 PF13926.6 ORF146202 - 0.1 12.6 2.4 0.089 12.8 0.9 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4211) RE_EcoO109I PF14511.6 ORF146202 - 0.12 12.0 2.3 0.25 10.9 1.6 1.9 1 1 1 2 2 2 0 Type II restriction endonuclease EcoO109I 60KD_IMP PF02096.20 ORF146202 - 0.12 12.3 0.6 0.24 11.3 0.6 1.5 1 0 0 1 1 1 0 60Kd inner membrane protein FeoB_Cyto PF17910.1 ORF146202 - 0.15 12.7 2.6 6.9 7.3 2.6 2.7 1 1 0 1 1 1 0 FeoB cytosolic helical domain CIDR1_gamma PF18562.1 ORF146202 - 1.8 8.7 6.7 5.5 7.2 0.1 3.2 3 1 0 3 3 3 0 Cysteine-Rich Interdomain Region 1 gamma DUF726 PF05277.12 ORF146202 - 7.9 5.3 7.3 13 4.6 7.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF726) DAGK_cat PF00781.24 ORF144811 - 7e-22 77.4 0.0 1.2e-21 76.7 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Ank_2 PF12796.7 ORF144468 - 1.2e-25 89.9 1.0 3.9e-12 46.6 0.1 3.5 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF144468 - 4.9e-20 69.5 1.8 0.00028 21.1 0.2 5.4 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF144468 - 4.4e-19 68.0 6.5 0.00054 20.3 0.1 5.5 5 0 0 5 5 5 4 Ankyrin repeat Ank_4 PF13637.6 ORF144468 - 1.8e-18 66.6 4.7 6.4e-06 26.6 0.0 3.8 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF144468 - 6.6e-16 58.2 9.8 6.8e-05 23.1 0.0 4.9 1 1 4 5 5 5 5 Ankyrin repeats (many copies) DUF5352 PF17303.2 ORF141794 - 4.4 7.1 7.3 1 9.2 0.5 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5352) Pantoate_transf PF02548.15 ORF140621 - 2.3e-105 351.7 0.4 2.6e-105 351.5 0.4 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase Asp_Glu_race PF01177.22 ORF140621 - 0.0038 17.1 0.0 0.0066 16.3 0.0 1.3 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase PEP_mutase PF13714.6 ORF140621 - 0.013 14.9 0.3 0.031 13.7 0.1 1.6 2 0 0 2 2 2 0 Phosphoenolpyruvate phosphomutase EF-hand_1 PF00036.32 ORF140389 - 2e-33 111.4 10.4 9.4e-09 34.2 1.3 4.5 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 ORF140389 - 1.2e-27 96.1 6.1 4.5e-15 55.9 2.0 2.6 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF140389 - 1.9e-25 86.6 9.1 7e-08 31.8 0.1 4.7 3 1 1 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 ORF140389 - 5.4e-23 79.4 12.9 1.5e-07 30.6 0.1 4.9 4 1 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF140389 - 4.5e-18 64.9 13.6 2.9e-07 30.2 0.5 4.2 1 1 3 4 4 4 4 EF-hand domain pair Pkinase PF00069.25 ORF140389 - 3.7e-15 56.0 0.4 1.5e-14 54.0 0.0 2.1 2 1 0 2 2 2 1 Protein kinase domain EF-hand_9 PF14658.6 ORF140389 - 2.2e-09 37.5 0.1 3.1e-06 27.4 0.0 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 ORF140389 - 2.7e-08 33.7 7.4 0.00089 19.2 0.6 3.3 2 1 2 4 4 4 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 ORF140389 - 1.5e-05 25.2 4.8 0.0046 17.3 0.6 2.4 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Sigma54_CBD PF04963.13 ORF140389 - 0.1 12.5 1.1 0.26 11.1 1.1 1.8 1 1 0 1 1 1 0 Sigma-54 factor, core binding domain PMBR PF09373.10 ORF140389 - 0.11 12.7 0.1 19 5.6 0.0 3.6 4 0 0 4 4 4 0 Pseudomurein-binding repeat His_Phos_1 PF00300.22 ORF131437 - 0.0091 15.7 0.0 0.018 14.7 0.0 1.5 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Cnn_1N PF07989.11 ORF129985 - 0.0041 17.2 23.8 0.043 14.0 5.1 2.7 2 0 0 2 2 2 2 Centrosomin N-terminal motif 1 Troponin PF00992.20 ORF129985 - 0.0055 17.0 18.1 0.28 11.5 8.7 2.4 2 0 0 2 2 2 2 Troponin Uso1_p115_C PF04871.13 ORF129985 - 0.016 15.6 11.6 0.016 15.5 0.1 2.5 2 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region VP9 PF09625.10 ORF129985 - 0.02 15.1 0.3 0.02 15.1 0.3 2.5 2 0 0 2 2 2 0 VP9 protein ZapB PF06005.12 ORF129985 - 0.022 15.2 1.7 0.022 15.2 1.7 3.2 2 1 0 2 2 2 0 Cell division protein ZapB TMF_TATA_bd PF12325.8 ORF129985 - 0.025 14.8 16.6 0.028 14.6 9.1 2.3 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding CEP209_CC5 PF16574.5 ORF129985 - 0.029 14.5 20.9 0.03 14.5 12.4 2.7 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 Rootletin PF15035.6 ORF129985 - 0.03 14.3 11.5 0.067 13.2 11.5 1.5 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion DivIVA PF05103.13 ORF129985 - 0.045 13.9 6.8 1.5 8.9 0.8 2.5 2 0 0 2 2 2 0 DivIVA protein CCDC92 PF14916.6 ORF129985 - 0.057 13.2 12.1 2.9 7.7 1.5 3.9 3 1 0 3 3 3 0 Coiled-coil domain of unknown function Phage_GP20 PF06810.11 ORF129985 - 0.058 13.2 17.8 0.071 12.9 2.1 2.5 2 1 1 3 3 3 0 Phage minor structural protein GP20 Snapin_Pallidin PF14712.6 ORF129985 - 0.14 12.6 10.6 0.97 9.9 3.9 2.6 2 0 0 2 2 2 0 Snapin/Pallidin Tup_N PF08581.10 ORF129985 - 0.14 12.5 16.5 1.5 9.2 5.6 2.7 2 0 0 2 2 2 0 Tup N-terminal DUF3450 PF11932.8 ORF129985 - 0.16 11.2 9.3 0.66 9.2 4.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Lebercilin PF15619.6 ORF129985 - 0.19 11.4 19.5 0.041 13.6 5.4 3.2 2 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease DUF1664 PF07889.12 ORF129985 - 0.21 11.7 4.7 5.2 7.1 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Ead_Ea22 PF13935.6 ORF129985 - 0.35 11.5 12.0 1.8 9.2 1.1 2.2 1 1 1 2 2 2 0 Ead/Ea22-like protein ERM PF00769.19 ORF129985 - 0.4 10.5 15.6 0.03 14.1 7.3 2.1 1 1 0 2 2 2 0 Ezrin/radixin/moesin family Spc7 PF08317.11 ORF129985 - 0.58 9.0 20.4 0.58 9.0 4.5 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein PhoU PF01895.19 ORF129985 - 0.67 10.5 9.3 1.1 9.7 2.2 2.6 2 0 0 2 2 2 0 PhoU domain YtxH PF12732.7 ORF129985 - 0.94 10.1 3.1 82 3.8 3.1 2.7 1 1 0 1 1 1 0 YtxH-like protein UPF0242 PF06785.11 ORF129985 - 1.5 8.9 19.9 3.1 7.9 8.7 2.4 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus TSC22 PF01166.18 ORF129985 - 2.1 8.7 17.0 0.4 11.0 4.2 3.8 2 2 1 3 3 3 0 TSC-22/dip/bun family AKNA PF12443.8 ORF129985 - 2.2 9.0 8.7 2.7 8.7 0.4 2.9 2 2 0 2 2 2 0 AT-hook-containing transcription factor DUF641 PF04859.12 ORF129985 - 2.3 8.6 9.1 2 8.7 4.5 2.3 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) bZIP_1 PF00170.21 ORF129985 - 2.3 8.4 25.9 0.091 12.9 2.3 4.5 2 2 2 4 4 4 0 bZIP transcription factor Ly49 PF08391.10 ORF129985 - 2.5 8.5 12.1 0.55 10.6 4.7 2.3 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region Fe-S_assembly PF04384.13 ORF129985 - 2.5 8.8 7.0 2.4 8.8 2.3 2.7 2 0 0 2 2 2 0 Iron-sulphur cluster assembly Cep57_CLD_2 PF14197.6 ORF129985 - 2.7 8.1 21.3 0.34 11.0 4.6 3.8 2 2 1 3 3 3 0 Centrosome localisation domain of PPC89 DivIC PF04977.15 ORF129985 - 4.3 7.2 17.4 1.2 8.9 1.3 3.7 2 2 2 4 4 4 0 Septum formation initiator ACCA PF03255.14 ORF129985 - 4.9 7.0 8.6 7.5 6.4 0.4 2.4 2 0 0 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FlaC_arch PF05377.11 ORF129985 - 5.1 7.6 14.4 1.9 9.0 0.3 4.2 3 2 1 4 4 3 0 Flagella accessory protein C (FlaC) XhlA PF10779.9 ORF129985 - 5.3 7.3 7.8 32 4.8 0.2 2.7 2 0 0 2 2 2 0 Haemolysin XhlA TMF_DNA_bd PF12329.8 ORF129985 - 5.4 7.1 21.3 0.09 12.8 4.4 2.8 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF724 PF05266.14 ORF129985 - 6.7 6.5 15.2 2.9 7.7 6.6 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF724) APG6_N PF17675.1 ORF129985 - 7.7 7.1 20.4 7.6 7.1 9.7 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region TolA_bind_tri PF16331.5 ORF129985 - 9.2 6.4 9.4 1.8 8.7 0.5 3.0 2 1 1 3 3 3 0 TolA binding protein trimerisation PAN_4 PF14295.6 ORF128535 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain DUF3980 PF13140.6 ORF126968 - 0.026 14.9 1.1 0.11 12.9 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3980) FKBP_C PF00254.28 ORF125765 - 4.9e-27 94.1 0.0 7.7e-27 93.5 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF1356 PF07092.12 ORF125765 - 0.023 14.0 0.6 0.23 10.7 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1356) MscS_TM PF12794.7 ORF125765 - 0.082 11.8 0.2 0.41 9.5 0.1 1.8 2 0 0 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 EpsG PF14897.6 ORF125765 - 0.13 11.6 1.6 9.2 5.5 0.5 2.1 2 0 0 2 2 2 0 EpsG family DUF4173 PF13777.6 ORF125765 - 0.48 9.8 5.8 2 7.8 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4173) Spore_GerAC PF05504.11 ORF123123 - 0.062 13.5 4.0 5.8 7.1 4.1 2.1 2 0 0 2 2 2 0 Spore germination B3/ GerAC like, C-terminal FKBP_C PF00254.28 ORF122685 - 4.9e-27 94.1 0.0 7.7e-27 93.5 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF1356 PF07092.12 ORF122685 - 0.023 14.0 0.6 0.23 10.7 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1356) MscS_TM PF12794.7 ORF122685 - 0.082 11.8 0.2 0.41 9.5 0.1 1.8 2 0 0 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 EpsG PF14897.6 ORF122685 - 0.13 11.6 1.6 9.2 5.5 0.5 2.1 2 0 0 2 2 2 0 EpsG family DUF4173 PF13777.6 ORF122685 - 0.48 9.8 5.8 2 7.8 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4173) WD40 PF00400.32 ORF122599 - 0.0025 18.6 0.3 0.56 11.2 0.1 2.6 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF122599 - 0.087 13.1 0.1 3.7 7.9 0.0 2.9 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain PAN_4 PF14295.6 ORF121639 - 0.0031 17.4 0.3 0.0031 17.4 0.3 2.8 3 0 0 3 3 3 1 PAN domain GST_N_2 PF13409.6 ORF121362 - 3.6e-17 62.4 0.0 6.1e-17 61.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF121362 - 4.1e-17 62.4 0.0 7.6e-17 61.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF121362 - 5.2e-10 39.2 0.1 1.2e-09 38.0 0.1 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF121362 - 6.5e-10 39.2 0.0 1.5e-09 38.1 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF121362 - 4.9e-08 33.1 0.4 1e-07 32.0 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 ORF121362 - 2.6e-05 24.8 0.0 4.1e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 ORF121362 - 0.00011 22.3 0.1 0.00023 21.3 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF121362 - 0.00044 20.4 0.0 0.00093 19.4 0.0 1.5 1 0 0 1 1 1 1 Glutaredoxin DUF2244 PF10003.9 ORF120810 - 0.18 11.5 1.3 0.18 11.4 0.1 1.6 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) 7tm_6 PF02949.20 ORF119961 - 0.029 13.5 5.2 0.038 13.1 5.2 1.3 1 0 0 1 1 1 0 7tm Odorant receptor EMP70 PF02990.16 ORF119961 - 0.032 12.9 8.6 0.047 12.4 8.6 1.1 1 0 0 1 1 1 0 Endomembrane protein 70 HEAT PF02985.22 ORF118662 - 0.0055 16.8 0.0 0.036 14.3 0.0 2.4 2 0 0 2 2 2 1 HEAT repeat Cys_knot PF00007.22 ORF117066 - 0.75 10.1 7.3 4.3 7.7 4.3 3.1 3 1 0 3 3 3 0 Cystine-knot domain Orf78 PF06024.12 ORF116273 - 0.035 14.4 2.8 0.051 13.9 0.3 2.2 2 0 0 2 2 2 0 Orf78 (ac78) Sid-5 PF17204.3 ORF116273 - 0.2 11.8 1.4 0.47 10.7 1.0 1.8 2 0 0 2 2 2 0 Sid-5 family DUF3139 PF11337.8 ORF116273 - 6.7 7.4 11.2 23 5.7 11.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) zf-H2C2_2 PF13465.6 ORF114897 - 7.6e-08 32.5 11.0 9.2e-08 32.2 1.2 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF114897 - 9.1e-08 32.2 6.8 1.1e-05 25.6 2.1 2.8 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF114897 - 3.8e-06 27.3 6.1 0.00049 20.7 1.7 2.8 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF114897 - 0.001 19.3 2.5 0.002 18.4 2.5 1.6 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-H2C2_5 PF13909.6 ORF114897 - 0.032 14.0 4.9 0.032 14.0 4.9 2.3 2 0 0 2 2 2 0 C2H2-type zinc-finger domain zf-C2H2_6 PF13912.6 ORF114897 - 2.6 8.2 10.0 0.65 10.1 4.4 2.8 3 0 0 3 3 3 0 C2H2-type zinc finger DAGK_cat PF00781.24 ORF112707 - 7e-22 77.4 0.0 1.2e-21 76.7 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Ank_5 PF13857.6 ORF110209 - 0.00022 21.4 0.5 0.0065 16.8 0.4 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF110209 - 0.0095 16.5 2.1 0.016 15.8 1.3 1.9 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF110209 - 0.017 15.6 0.7 0.97 10.2 0.1 3.4 2 1 1 3 3 3 0 Ankyrin repeat DUF2633 PF11119.8 ORF110209 - 0.031 14.2 0.4 0.061 13.2 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Ank_4 PF13637.6 ORF110209 - 0.084 13.5 4.1 6 7.6 1.0 3.5 1 1 1 3 3 3 0 Ankyrin repeats (many copies) Phage_ABA_S PF18066.1 ORF110209 - 0.13 13.0 0.0 0.37 11.5 0.0 1.8 2 0 0 2 2 2 0 Phage ABA sandwich domain DUF2254 PF10011.9 ORF106806 - 0.013 14.4 0.2 0.022 13.6 0.0 1.4 2 0 0 2 2 2 0 Predicted membrane protein (DUF2254) TMEMspv1-c74-12 PF11044.8 ORF106806 - 0.034 14.1 3.3 0.063 13.3 0.1 2.4 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein MFS_1_like PF12832.7 ORF106806 - 1.9 7.3 9.3 2.4 6.9 9.3 1.2 1 0 0 1 1 1 0 MFS_1 like family AAA_24 PF13479.6 ORF105994 - 0.032 14.0 0.8 0.06 13.1 0.1 1.8 2 0 0 2 2 2 0 AAA domain ALMT PF11744.8 ORF105994 - 0.64 8.8 2.6 0.63 8.8 0.2 1.9 2 0 0 2 2 2 0 Aluminium activated malate transporter Phage_Gp23 PF10669.9 ORF105994 - 0.69 10.2 8.2 0.53 10.6 4.5 2.2 2 0 0 2 2 2 0 Protein gp23 (Bacteriophage A118) UnbV_ASPIC PF07593.12 ORF105104 - 0.059 13.3 0.1 0.1 12.6 0.1 1.4 1 0 0 1 1 1 0 ASPIC and UnbV Carb_anhydrase PF00194.21 ORF104303 - 2.8e-26 92.6 0.5 4e-26 92.1 0.5 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase TMEM132D_C PF15706.5 ORF104303 - 0.0015 18.3 0.5 0.013 15.2 0.1 2.2 2 0 0 2 2 2 1 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term TMEM154 PF15102.6 ORF104303 - 0.012 15.6 0.0 0.028 14.3 0.0 1.6 1 1 0 1 1 1 0 TMEM154 protein family zf-C3HC4_3 PF13920.6 NODE_27223_length_787_cov_187.954787_g21332_i0reverse_frame_1 - 2e-11 43.5 6.6 2e-11 43.5 6.6 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 NODE_27223_length_787_cov_187.954787_g21332_i0reverse_frame_1 - 0.00026 21.3 7.0 0.00026 21.3 7.0 2.0 2 0 0 2 2 2 1 Ring finger domain Prok-RING_4 PF14447.6 NODE_27223_length_787_cov_187.954787_g21332_i0reverse_frame_1 - 0.0042 16.9 3.1 0.011 15.6 3.1 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 TssN PF17555.2 NODE_27223_length_787_cov_187.954787_g21332_i0reverse_frame_1 - 0.0065 15.9 2.0 0.017 14.5 1.6 1.8 1 1 1 2 2 2 1 Type VI secretion system, TssN DUF1129 PF06570.11 NODE_27223_length_787_cov_187.954787_g21332_i0reverse_frame_1 - 0.054 13.0 0.5 0.15 11.5 0.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) Phage_holin_3_3 PF16083.5 NODE_27223_length_787_cov_187.954787_g21332_i0reverse_frame_1 - 0.5 10.5 4.2 0.46 10.6 0.6 2.4 1 1 1 2 2 2 0 LydA holin phage, holin superfamily III DUF3330 PF11809.8 NODE_27223_length_787_cov_187.954787_g21332_i0reverse_frame_1 - 9.3 6.4 8.1 4.9 7.3 4.6 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF3330) RF-1 PF00472.20 NODE_27205_length_787_cov_1616.885638_g21318_i0reverse_frame_1 - 0.045 13.7 0.1 0.08 12.9 0.1 1.4 1 0 0 1 1 1 0 RF-1 domain MutL PF13941.6 NODE_27186_length_788_cov_135.918991_g21303_i0reverse_frame_1 - 0.038 12.6 0.1 0.066 11.8 0.1 1.3 1 0 0 1 1 1 0 MutL protein DFP PF04127.15 NODE_27186_length_788_cov_135.918991_g21303_i0reverse_frame_1 - 1.8 8.4 7.0 1.3 8.8 1.0 2.1 2 0 0 2 2 2 0 DNA / pantothenate metabolism flavoprotein Endonuc_Holl PF10107.9 NODE_27186_length_788_cov_135.918991_g21303_i0reverse_frame_1 - 2.8 7.8 17.8 4.2 7.2 3.4 2.4 2 0 0 2 2 2 0 Endonuclease related to archaeal Holliday junction resolvase Tubulin PF00091.25 NODE_27086_length_790_cov_897.207947_g21214_i0reverse_frame_3 - 6.5e-67 225.6 0.0 7.5e-67 225.4 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Misat_Tub_SegII PF10644.9 NODE_27086_length_790_cov_897.207947_g21214_i0reverse_frame_3 - 0.001 19.3 0.0 0.0017 18.6 0.0 1.3 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 NODE_27086_length_790_cov_897.207947_g21214_i0reverse_frame_3 - 0.015 15.0 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 NODE_27086_length_790_cov_897.207947_g21214_i0reverse_frame_3 - 0.074 12.2 0.0 0.099 11.8 0.0 1.1 1 0 0 1 1 1 0 Tubulin like NADHdh-2_N PF12155.8 NODE_27086_length_790_cov_897.207947_g21214_i0forward_frame_3 - 0.071 13.5 0.1 0.45 10.9 0.0 2.1 2 0 0 2 2 2 0 NADH dehydrogenase subunit 2 N-terminal SAP130_C PF16014.5 NODE_27086_length_790_cov_897.207947_g21214_i0forward_frame_3 - 0.084 12.0 0.5 0.12 11.4 0.5 1.2 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus TFIIA PF03153.13 NODE_27035_length_792_cov_287.607662_g21170_i0forward_frame_3 - 1.7 8.5 6.3 1.9 8.4 6.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Ank_4 PF13637.6 NODE_27025_length_792_cov_14780.126816_g18113_i12forward_frame_3 - 2.2e-18 66.4 0.1 1.3e-11 44.8 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_27025_length_792_cov_14780.126816_g18113_i12forward_frame_3 - 5.3e-15 55.8 0.0 1.2e-14 54.6 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_27025_length_792_cov_14780.126816_g18113_i12forward_frame_3 - 3.7e-13 49.4 0.0 1.9e-10 40.8 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_27025_length_792_cov_14780.126816_g18113_i12forward_frame_3 - 7.4e-13 47.4 0.0 1.7e-06 27.9 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 NODE_27025_length_792_cov_14780.126816_g18113_i12forward_frame_3 - 4e-10 39.7 0.0 5.1e-06 26.7 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 NODE_27025_length_792_cov_14780.126816_g18113_i12forward_frame_3 - 0.035 14.3 0.3 0.067 13.4 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain ALMT PF11744.8 ORF98293 - 4.9 5.9 9.1 6.7 5.4 9.1 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter SieB PF14163.6 ORF95903 - 9.2 5.8 13.5 2.2 7.7 0.9 3.0 2 1 1 3 3 3 0 Super-infection exclusion protein B Allexi_40kDa PF05549.11 ORF9382 - 0.095 12.2 2.2 0.094 12.2 1.0 1.6 1 1 0 1 1 1 0 Allexivirus 40kDa protein RHINO PF15319.6 ORF9328 - 0.0095 16.0 1.6 0.013 15.5 1.6 1.1 1 0 0 1 1 1 1 RAD9, RAD1, HUS1-interacting nuclear orphan protein TpcC PF12642.7 ORF9328 - 0.088 12.6 3.9 0.13 12.0 3.9 1.3 1 1 0 1 1 1 0 Conjugative transposon protein TcpC Cyt-b5 PF00173.28 ORF89418 - 1.4e-17 63.6 0.1 2.5e-17 62.8 0.1 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain AAA PF00004.29 ORF89010 - 3.2e-13 50.3 0.0 4.9e-13 49.6 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 ORF89010 - 0.00088 19.7 0.2 0.0044 17.4 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain TIP49 PF06068.13 ORF89010 - 0.0014 17.9 0.0 0.0022 17.3 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain Sigma54_activat PF00158.26 ORF89010 - 0.0071 16.1 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain TsaE PF02367.17 ORF89010 - 0.011 15.7 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_14 PF13173.6 ORF89010 - 0.019 15.0 0.0 0.041 13.9 0.0 1.7 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 ORF89010 - 0.056 12.8 0.2 0.23 10.8 0.1 2.0 1 1 1 2 2 2 0 KaiC RuvB_N PF05496.12 ORF89010 - 0.07 12.9 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 ORF89010 - 0.091 12.7 1.0 0.26 11.2 0.1 2.0 2 0 0 2 2 2 0 NACHT domain DUF521 PF04412.13 ORF89010 - 0.12 11.1 0.0 1.3 7.7 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF521) Dpy-30 PF05186.13 ORF89010 - 0.13 12.0 0.1 0.31 10.8 0.0 1.5 2 0 0 2 2 2 0 Dpy-30 motif AAA_7 PF12775.7 ORF89010 - 0.17 11.4 0.2 0.8 9.2 0.0 2.1 3 0 0 3 3 3 0 P-loop containing dynein motor region AAA_22 PF13401.6 ORF89010 - 0.19 12.0 1.4 8.3 6.7 1.4 2.6 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF89010 - 0.25 10.9 0.7 0.65 9.5 0.2 1.9 2 1 0 2 2 2 0 AAA domain MRP-S28 PF10213.9 ORF84369 - 1.1e-07 32.4 0.0 1.7e-07 31.7 0.0 1.5 1 0 0 1 1 1 1 Mitochondrial ribosomal subunit protein Cation_ATPase_N PF00690.26 ORF84304 - 0.12 12.0 0.0 0.24 11.1 0.0 1.6 1 0 0 1 1 1 0 Cation transporter/ATPase, N-terminus Kazal_1 PF00050.21 ORF84304 - 0.16 12.0 0.8 0.33 11.0 0.8 1.5 1 0 0 1 1 1 0 Kazal-type serine protease inhibitor domain Spc7 PF08317.11 ORF84304 - 0.28 10.0 3.6 0.42 9.5 3.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein LIM PF00412.22 ORF83798 - 0.14 12.5 1.5 0.22 11.7 0.2 2.0 2 0 0 2 2 2 0 LIM domain IgaA PF07095.11 ORF81615 - 1.7e-131 439.5 0.0 1.9e-131 439.4 0.0 1.0 1 0 0 1 1 1 1 Intracellular growth attenuator protein IgaA CDC50 PF03381.15 ORF81374 - 3.5e-59 200.6 0.5 3.5e-59 200.6 0.5 1.8 1 1 1 2 2 2 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Pox_A9 PF04835.12 ORF81374 - 0.052 13.7 0.7 0.097 12.8 0.7 1.4 1 0 0 1 1 1 0 A9 protein conserved region Thioredoxin PF00085.20 ORF77767 - 2.6e-25 88.4 0.0 4.3e-25 87.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF77767 - 0.00017 22.0 0.0 0.0012 19.3 0.0 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain HyaE PF07449.11 ORF77767 - 0.00021 21.2 0.0 0.00054 19.9 0.0 1.6 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_7 PF13899.6 ORF77767 - 0.0017 18.5 0.0 0.0042 17.2 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.6 ORF77767 - 0.0019 18.5 0.0 0.026 14.9 0.0 2.4 1 1 1 2 2 2 1 Thioredoxin-like TraF PF13728.6 ORF77767 - 0.0057 16.5 0.0 0.01 15.7 0.0 1.4 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_9 PF14595.6 ORF77767 - 0.0089 15.8 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_6 PF13848.6 ORF77767 - 0.047 13.6 0.0 2.2 8.1 0.0 2.3 2 0 0 2 2 2 0 Thioredoxin-like domain AhpC-TSA PF00578.21 ORF77767 - 0.056 13.4 0.0 0.24 11.4 0.0 1.9 1 1 1 2 2 2 0 AhpC/TSA family FAM176 PF14851.6 ORF77767 - 0.14 11.8 0.0 2.1 8.0 0.0 2.1 2 0 0 2 2 2 0 FAM176 family MFS_1 PF07690.16 ORF75449 - 0.00011 21.2 6.4 0.0025 16.8 4.3 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily Sigma_reg_N PF13800.6 ORF75449 - 1.7 8.9 6.1 79 3.6 2.1 3.3 3 0 0 3 3 3 0 Sigma factor regulator N-terminal MMR_HSR1 PF01926.23 ORF68762 - 6.2e-20 71.4 0.0 1e-19 70.7 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF68762 - 1.8e-08 34.5 0.4 0.00066 19.6 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 ORF68762 - 1.2e-05 24.9 0.0 1.8e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 ORF68762 - 0.00024 21.2 0.0 0.2 11.7 0.1 2.4 1 1 1 2 2 2 2 Dynamin family GTP_EFTU PF00009.27 ORF68762 - 0.0011 18.6 0.1 0.013 15.0 0.0 2.2 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain FtsK_SpoIIIE PF01580.18 ORF68762 - 0.013 14.9 0.0 0.016 14.5 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family SRPRB PF09439.10 ORF68762 - 0.04 13.3 0.0 0.086 12.3 0.0 1.6 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Arf PF00025.21 ORF68762 - 0.11 12.0 0.5 2.7 7.4 0.2 2.1 2 0 0 2 2 2 0 ADP-ribosylation factor family zf-C2H2 PF00096.26 ORF68719 - 6.7e-14 51.5 21.6 1.8e-07 31.2 2.0 3.6 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF68719 - 5.5e-12 45.5 25.6 2.5e-09 37.1 2.0 4.0 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF68719 - 2.3e-09 37.3 20.3 0.00026 21.6 1.2 3.9 4 0 0 4 4 3 3 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF68719 - 1.8e-08 34.1 21.7 2.8e-05 24.0 2.9 4.1 4 0 0 4 4 4 2 C2H2-type zinc finger zf-H2C2_5 PF13909.6 ORF68719 - 0.00017 21.2 7.4 0.00018 21.1 4.4 2.5 2 0 0 2 2 2 1 C2H2-type zinc-finger domain zf-C2H2_11 PF16622.5 ORF68719 - 0.0034 17.1 4.4 0.85 9.4 0.1 2.7 2 0 0 2 2 2 2 zinc-finger C2H2-type C1_1 PF00130.22 ORF68719 - 0.0046 16.8 0.7 0.02 14.8 0.7 2.1 1 1 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C2HE PF16278.5 ORF68719 - 0.0049 17.3 8.7 0.027 14.9 8.7 2.4 1 1 0 1 1 1 1 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_jaz PF12171.8 ORF68719 - 0.006 16.8 18.4 0.15 12.4 2.8 3.7 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-C2H2_8 PF15909.5 ORF68719 - 0.0088 16.3 5.5 0.0089 16.3 4.1 1.8 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF68719 - 0.014 15.8 16.1 0.082 13.3 1.8 3.2 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf_ZIC PF18366.1 ORF68719 - 0.07 13.3 6.8 3.6 7.8 0.1 3.5 2 1 1 3 3 3 0 Zic proteins zinc finger domain zf-BED PF02892.15 ORF68719 - 0.33 11.0 18.3 0.38 10.8 4.6 3.8 1 1 3 4 4 4 0 BED zinc finger ECH_1 PF00378.20 ORF67242 - 2.4e-22 79.5 0.0 3e-22 79.1 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Macro PF01661.21 ORF65825 - 2.1e-32 111.7 3.3 2.7e-32 111.3 0.1 2.5 1 1 1 3 3 3 1 Macro domain Plasmodium_Vir PF05795.11 ORF65825 - 0.31 10.4 8.2 0.39 10.1 8.2 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein PTS_IIA PF02255.16 ORF65825 - 1.2 9.2 6.0 5.1 7.2 4.6 2.3 2 0 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit CPSF100_C PF13299.6 ORF65825 - 7.5 6.7 9.3 13 5.9 9.3 1.4 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal REV PF00424.18 ORF5984 - 0.022 14.8 0.5 0.051 13.6 0.5 1.6 1 0 0 1 1 1 0 REV protein (anti-repression trans-activator protein) Alpha-amylase_C PF02806.18 ORF58859 - 1.1e-07 32.2 0.0 2.8e-07 30.9 0.0 1.6 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain Apolipoprotein PF01442.18 ORF58380 - 0.0065 16.4 1.8 0.012 15.5 1.8 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF4140 PF13600.6 ORF58380 - 0.56 10.7 2.6 15 6.1 0.0 2.7 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) MFS_1 PF07690.16 ORF57812 - 1e-05 24.7 4.4 0.00049 19.1 5.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sigma_reg_N PF13800.6 ORF57812 - 0.34 11.2 6.0 20 5.5 0.0 3.3 3 0 0 3 3 3 0 Sigma factor regulator N-terminal DnaJ PF00226.31 ORF56404 - 1.6e-20 73.0 2.4 3.5e-20 71.9 2.4 1.6 1 0 0 1 1 1 1 DnaJ domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks77.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks77.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks77.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks77.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:28:41 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Fcf1 PF04900.12 ORF5396 - 3.7e-20 72.2 1.7 5e-20 71.8 0.2 1.9 2 0 0 2 2 2 1 Fcf1 DUF4131 PF13567.6 ORF53228 - 0.16 11.7 0.5 0.28 10.8 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) zf-H2C2_2 PF13465.6 ORF50872 - 2.3e-07 31.0 17.0 3.1e-07 30.5 1.5 3.9 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF50872 - 0.0005 20.4 1.8 0.0005 20.4 1.8 5.1 5 0 0 5 5 5 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF50872 - 0.00068 20.3 1.5 0.00068 20.3 1.5 5.0 4 0 0 4 4 4 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF50872 - 0.31 11.7 8.0 0.091 13.4 1.5 2.3 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats DUF2530 PF10745.9 ORF48883 - 0.041 14.1 1.4 0.12 12.7 1.4 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2530) zf-C2HC5 PF06221.13 ORF46351 - 9.3e-09 35.2 9.8 1.6e-08 34.4 9.8 1.3 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type MCR_alpha_N PF02745.15 ORF46351 - 0.03 13.7 0.8 0.059 12.7 0.8 1.4 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, N-terminal domain YtxH PF12732.7 ORF46351 - 4.7 7.8 10.3 5.8 7.5 0.4 2.9 2 1 1 3 3 3 0 YtxH-like protein SNF2_N PF00176.23 ORF45344 - 0.12 11.1 0.0 0.16 10.7 0.0 1.1 1 0 0 1 1 1 0 SNF2 family N-terminal domain Methyltransf_16 PF10294.9 ORF30208 - 6.2e-17 61.9 0.1 8.4e-17 61.4 0.1 1.1 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_23 PF13489.6 ORF30208 - 0.021 14.7 0.1 2.7 7.8 0.1 2.2 1 1 1 2 2 2 0 Methyltransferase domain DUF436 PF04260.12 ORF30208 - 0.023 14.3 0.3 0.059 13.0 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF436) Cation_ATPase PF13246.6 ORF16224 - 8.9e-09 35.3 0.0 2.4e-08 33.9 0.0 1.7 2 0 0 2 2 2 1 Cation transport ATPase (P-type) DUF3507 PF12015.8 ORF16224 - 0.037 13.7 0.2 0.059 13.1 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3507) DUF2162 PF09930.9 ORF16224 - 0.056 12.9 6.5 0.084 12.3 6.5 1.2 1 0 0 1 1 1 0 Predicted transporter (DUF2162) DUF2963 PF11178.8 ORF16224 - 3.7 7.3 6.9 6.6 6.5 1.8 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2963) DUF3671 PF12420.8 ORF16224 - 9.6 6.3 10.9 1.6 8.8 6.1 2.1 2 1 1 3 3 3 0 Protein of unknown function Flagellin_N PF00669.20 ORF150541 - 0.071 13.2 5.0 0.14 12.3 5.0 1.4 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region Seryl_tRNA_N PF02403.22 ORF150541 - 1.2 9.4 11.4 2.3 8.5 11.4 1.4 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Tho2 PF11262.8 ORF150541 - 2 7.6 5.1 2.5 7.2 5.1 1.3 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 ATG16 PF08614.11 ORF150541 - 3.6 7.8 27.5 1.5 9.0 20.2 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) FapA PF03961.13 ORF150541 - 4.4 5.8 6.9 5.5 5.5 6.9 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A T7SS_ESX_EspC PF10824.8 ORF150541 - 5.3 7.6 7.0 4.3 7.9 3.0 2.3 2 1 0 2 2 2 0 Excreted virulence factor EspC, type VII ESX diderm XhlA PF10779.9 ORF150541 - 5.9 7.2 7.5 1.2 9.4 2.5 2.3 2 1 1 3 3 3 0 Haemolysin XhlA Exonuc_VII_L PF02601.15 ORF150541 - 6.1 6.3 13.0 8.3 5.9 13.0 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4407 PF14362.6 ORF150541 - 9.7 5.4 15.1 15 4.9 15.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) EccE PF11203.8 ORF149563 - 0.0021 18.4 0.2 0.012 15.9 0.0 2.3 2 1 0 2 2 2 1 Putative type VII ESX secretion system translocon, EccE DMPK_coil PF08826.10 ORF147001 - 0.00061 19.9 2.0 0.0012 18.9 2.0 1.5 1 0 0 1 1 1 1 DMPK coiled coil domain like Tropomyosin_1 PF12718.7 ORF147001 - 0.082 13.1 2.0 0.14 12.3 2.0 1.3 1 0 0 1 1 1 0 Tropomyosin like DUF4164 PF13747.6 ORF147001 - 0.19 12.1 6.8 3 8.2 6.8 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) Cpn60_TCP1 PF00118.24 ORF143896 - 1.8e-37 129.1 3.3 2.1e-37 128.9 3.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Zn_ribbon_recom PF13408.6 ORF139466 - 0.038 14.5 0.2 0.038 14.5 0.2 2.4 1 1 1 2 2 2 0 Recombinase zinc beta ribbon domain zf-H2C2_2 PF13465.6 ORF137470 - 2.3e-07 31.0 17.0 3.1e-07 30.5 1.5 3.9 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2 PF00096.26 ORF137470 - 0.0005 20.4 1.8 0.0005 20.4 1.8 5.1 5 0 0 5 5 5 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF137470 - 0.00068 20.3 1.5 0.00068 20.3 1.5 5.0 4 0 0 4 4 4 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF137470 - 0.31 11.7 8.0 0.091 13.4 1.5 2.3 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats adh_short PF00106.25 ORF1360 - 1e-34 119.7 0.1 2.2e-34 118.7 0.0 1.5 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF1360 - 8.9e-24 84.3 0.1 1.2e-23 83.9 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF1360 - 2.5e-08 34.0 0.0 2.5e-07 30.8 0.0 2.0 2 0 0 2 2 2 1 KR domain DUF4916 PF16262.5 ORF1360 - 0.048 13.2 0.0 0.08 12.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) DUF1430 PF07242.11 ORF134186 - 0.0025 18.0 8.6 0.0025 18.0 8.6 2.4 1 1 1 2 2 2 1 Protein of unknown function (DUF1430) PRT_C PF08372.10 ORF134186 - 1.8 8.3 9.5 0.57 9.9 0.2 2.9 2 1 1 3 3 3 0 Plant phosphoribosyltransferase C-terminal DUF3169 PF11368.8 ORF130626 - 0.0038 16.8 4.8 0.0074 15.8 4.8 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3169) Tetraspanin PF00335.20 ORF130626 - 0.013 15.2 0.2 0.02 14.6 0.2 1.3 1 0 0 1 1 1 0 Tetraspanin family Orf78 PF06024.12 ORF130626 - 0.086 13.2 3.9 5.1 7.5 0.1 2.2 2 0 0 2 2 2 0 Orf78 (ac78) PAP2_C PF14360.6 ORF130626 - 0.4 11.2 6.2 0.7 10.5 2.6 2.4 2 0 0 2 2 2 0 PAP2 superfamily C-terminal DUF4229 PF14012.6 ORF130626 - 0.65 10.1 5.8 1 9.5 0.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) Sigma_reg_N PF13800.6 ORF130626 - 1.2 9.4 5.4 5.4 7.4 0.3 2.6 2 1 0 2 2 2 0 Sigma factor regulator N-terminal TRIQK PF15168.6 ORF130626 - 3.7 7.5 6.1 10 6.1 3.8 2.4 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family GWT1 PF06423.12 ORF130209 - 0.18 11.9 0.3 6 7.0 0.0 2.6 1 1 0 2 2 2 0 GWT1 DUF5531 PF17671.1 ORF126200 - 0.35 10.7 2.0 1.9 8.4 1.8 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5531) Ank_2 PF12796.7 ORF1238 - 1.3e-35 121.8 0.8 3.2e-14 53.3 0.2 4.1 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF1238 - 9.4e-33 112.2 2.3 2.3e-07 31.2 0.0 5.3 3 2 1 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF1238 - 1.4e-26 91.7 5.5 0.00014 22.2 0.0 7.0 7 1 1 8 8 8 5 Ankyrin repeat Ank_5 PF13857.6 ORF1238 - 4.6e-26 90.5 5.6 1.6e-08 34.7 0.2 5.3 2 2 3 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF1238 - 5.5e-24 81.6 1.8 0.0096 16.4 0.0 8.3 9 0 0 9 9 9 5 Ankyrin repeat PP2C PF00481.21 ORF120348 - 8.7e-10 38.7 0.0 1.2e-09 38.2 0.0 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C GFO_IDH_MocA PF01408.22 ORF116685 - 1.2e-08 35.8 0.1 2.1e-08 35.0 0.1 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold CorC_HlyC PF03471.17 ORF115828 - 5.1e-18 64.9 1.4 7.6e-18 64.3 0.4 1.9 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.28 ORF115828 - 2.9e-06 27.6 1.5 0.028 14.8 0.1 3.1 3 0 0 3 3 3 2 CBS domain RRM_1 PF00076.22 ORF112673 - 4.6e-11 42.4 0.0 8.6e-11 41.5 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Torus PF16131.5 ORF112673 - 3.5e-08 34.1 0.8 1.9e-07 31.7 0.1 2.1 2 0 0 2 2 2 1 Torus domain zf_CCCH_4 PF18345.1 ORF112673 - 4e-06 26.7 3.1 9.4e-06 25.5 3.1 1.7 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 ORF112673 - 0.00019 21.2 0.8 0.00036 20.4 0.8 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Nup35_RRM_2 PF14605.6 ORF112673 - 0.0012 18.7 0.0 0.0025 17.8 0.0 1.5 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif zf-CCCH_4 PF18044.1 ORF112673 - 0.0031 17.3 2.6 0.0065 16.2 2.6 1.6 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_3 PF15663.5 ORF112673 - 0.0037 17.5 0.3 0.011 15.9 0.1 1.8 2 0 0 2 2 2 1 Zinc-finger containing family RRM_3 PF08777.11 ORF112673 - 0.02 14.9 0.0 0.035 14.1 0.0 1.3 1 0 0 1 1 1 0 RNA binding motif zf-CCCH_2 PF14608.6 ORF112673 - 0.025 15.1 2.3 0.059 13.9 2.3 1.7 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger RNA_bind PF08675.11 ORF112673 - 0.052 13.6 0.0 0.098 12.7 0.0 1.4 1 0 0 1 1 1 0 RNA binding domain NID PF07292.13 ORF112673 - 0.12 13.0 0.1 0.22 12.2 0.1 1.4 1 0 0 1 1 1 0 Nmi/IFP 35 domain (NID) PLDc_2 PF13091.6 ORF110825 - 4.9e-08 32.9 0.1 9.7e-08 32.0 0.1 1.4 1 0 0 1 1 1 1 PLD-like domain PLDc PF00614.22 ORF110825 - 8.3e-07 28.9 0.4 1.6e-06 28.1 0.4 1.5 1 0 0 1 1 1 1 Phospholipase D Active site motif PLC-beta_C PF08703.10 ORF110825 - 0.016 15.2 0.1 0.026 14.5 0.1 1.3 1 0 0 1 1 1 0 PLC-beta C terminal GldM_N PF12081.8 ORF110825 - 0.083 13.0 0.1 0.15 12.2 0.1 1.4 1 0 0 1 1 1 0 GldM N-terminal domain Rap1_C PF11626.8 ORF107101 - 8.7e-05 22.5 0.0 0.00023 21.2 0.0 1.8 1 0 0 1 1 1 1 TRF2-interacting telomeric protein/Rap1 - C terminal domain Pkinase PF00069.25 ORF105319 - 6.2e-62 209.4 0.2 6.9e-62 209.2 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF105319 - 4.7e-38 130.9 0.0 5.6e-38 130.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF105319 - 2.9e-09 36.7 0.0 3.6e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF105319 - 3.7e-06 26.0 0.0 5e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF105319 - 0.00011 21.3 0.2 0.00015 20.8 0.2 1.2 1 0 0 1 1 1 1 Haspin like kinase domain FTA2 PF13095.6 ORF105319 - 0.008 15.8 0.8 1.3 8.6 0.1 2.2 1 1 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 ORF105319 - 0.021 14.2 0.0 0.027 13.8 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family AzlC PF03591.14 ORF103911 - 0.074 13.5 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 AzlC protein DUF5531 PF17671.1 ORF102860 - 0.35 10.7 2.0 1.9 8.4 1.8 1.9 1 1 0 1 1 1 0 Family of unknown function (DUF5531) PspB PF06667.12 NODE_27325_length_784_cov_419.787717_g21417_i0forward_frame_1 - 0.18 11.9 3.1 0.16 12.0 1.9 1.6 1 1 0 1 1 1 0 Phage shock protein B Aminotran_1_2 PF00155.21 NODE_27278_length_786_cov_2.745672_g21383_i0forward_frame_1 - 2e-21 76.6 0.0 2.5e-21 76.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 NODE_27278_length_786_cov_2.745672_g21383_i0forward_frame_1 - 0.00061 19.2 0.0 0.00092 18.6 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family ABC_tran PF00005.27 NODE_27276_length_786_cov_2.972037_g21381_i0reverse_frame_1 - 3.8e-17 63.1 0.3 1.3e-09 38.6 0.0 2.2 2 0 0 2 2 2 2 ABC transporter DUF910 PF06014.11 NODE_27276_length_786_cov_2.972037_g21381_i0reverse_frame_1 - 0.018 15.1 0.0 0.041 13.9 0.0 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF910) MMTV_SAg PF01054.17 NODE_27276_length_786_cov_2.972037_g21381_i0reverse_frame_1 - 0.084 12.4 0.0 3.6 7.1 0.0 2.2 2 0 0 2 2 2 0 Mouse mammary tumour virus superantigen DTW PF03942.15 NODE_27273_length_786_cov_53.102530_g21378_i0reverse_frame_1 - 1.7e-05 24.6 0.0 4.5e-05 23.2 0.0 1.7 2 0 0 2 2 2 1 DTW domain zf-met PF12874.7 NODE_27273_length_786_cov_53.102530_g21378_i0reverse_frame_1 - 0.0091 16.4 0.0 0.024 15.0 0.0 1.8 1 0 0 1 1 1 1 Zinc-finger of C2H2 type FCD PF07729.12 NODE_27273_length_786_cov_53.102530_g21378_i0reverse_frame_1 - 0.012 16.0 0.0 0.029 14.8 0.0 1.6 1 0 0 1 1 1 0 FCD domain zf-C2H2_2 PF12756.7 NODE_27273_length_786_cov_53.102530_g21378_i0reverse_frame_1 - 0.023 15.0 0.0 0.05 13.9 0.0 1.5 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) PikAIV_N PF18605.1 NODE_27273_length_786_cov_53.102530_g21378_i0reverse_frame_1 - 0.071 12.7 0.8 1.1 8.9 0.1 2.4 2 0 0 2 2 2 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain zf-C2H2_4 PF13894.6 NODE_27273_length_786_cov_53.102530_g21378_i0reverse_frame_1 - 0.13 13.2 0.3 0.38 11.7 0.3 1.9 1 0 0 1 1 1 0 C2H2-type zinc finger PRONE PF03759.13 NODE_27205_length_787_cov_1616.885638_g21318_i0reverse_frame_3 - 0.002 17.0 2.9 0.0025 16.7 2.9 1.2 1 0 0 1 1 1 1 PRONE (Plant-specific Rop nucleotide exchanger) HXXSHH PF07586.11 NODE_27205_length_787_cov_1616.885638_g21318_i0reverse_frame_3 - 0.027 14.1 1.1 0.034 13.7 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1552) FAM150 PF15129.6 NODE_27205_length_787_cov_1616.885638_g21318_i0reverse_frame_3 - 1.9 8.6 9.9 0.21 11.7 4.1 2.1 2 0 0 2 2 2 0 FAM150 family GH97_C PF14509.6 NODE_27205_length_787_cov_1616.885638_g21318_i0reverse_frame_3 - 3.6 7.9 5.7 3.3 8.0 1.7 2.3 2 0 0 2 2 2 0 Glycosyl-hydrolase 97 C-terminal, oligomerisation DUF3888 PF13027.6 NODE_27204_length_787_cov_2111.924202_g9198_i9reverse_frame_3 - 0.0059 17.0 0.2 0.016 15.6 0.2 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3888) DUF1129 PF06570.11 NODE_27131_length_789_cov_444.629973_g21255_i0reverse_frame_2 - 0.074 12.5 0.2 0.074 12.5 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) DUF5522 PF17653.1 ORF99389 - 0.073 13.0 1.1 0.23 11.5 1.1 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5522) Torus PF16131.5 ORF96672 - 0.11 13.2 2.7 0.11 13.2 1.1 1.7 1 1 0 1 1 1 0 Torus domain zf-CXXC PF02008.20 ORF96672 - 0.51 10.4 7.7 1.8 8.6 7.7 2.0 1 1 0 1 1 1 0 CXXC zinc finger domain Ad_Cy_reg PF16701.5 ORF95846 - 0.0078 16.0 0.1 0.011 15.4 0.1 1.2 1 0 0 1 1 1 1 Adenylate cyclase regulatory domain Peptidase_M1 PF01433.20 ORF84146 - 4.1e-28 98.4 0.3 6.2e-28 97.9 0.3 1.2 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF84146 - 4.7e-16 59.5 0.4 6.3e-16 59.1 0.4 1.2 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Peptidase_M61 PF05299.12 ORF84146 - 0.0018 18.7 0.7 0.14 12.5 1.2 2.8 2 1 0 2 2 2 1 M61 glycyl aminopeptidase Peptidase_MA_2 PF13485.6 ORF84146 - 0.12 12.0 0.1 0.31 10.7 0.1 1.7 2 0 0 2 2 2 0 Peptidase MA superfamily Ion_trans PF00520.31 ORF81650 - 1.1e-21 77.3 31.9 1.4e-21 76.9 31.9 1.0 1 0 0 1 1 1 1 Ion transport protein SafA PF17073.5 ORF81650 - 0.45 10.5 0.0 0.45 10.5 0.0 2.7 2 1 1 3 3 3 0 Two-component-system connector protein TMEM82 PF15816.5 ORF81650 - 0.86 8.5 11.2 0.53 9.2 2.9 2.4 2 1 0 2 2 2 0 Transmembrane protein 82 Tetraspanin PF00335.20 ORF81650 - 2.2 7.9 17.8 1 9.0 9.1 2.4 2 1 0 2 2 2 0 Tetraspanin family WBP-1 PF11669.8 ORF81650 - 8.9 7.0 5.7 14 6.4 0.2 2.7 2 1 0 2 2 2 0 WW domain-binding protein 1 Ribosomal_S6e PF01092.19 ORF80676 - 1.4e-51 173.6 1.6 3e-51 172.6 1.6 1.5 1 0 0 1 1 1 1 Ribosomal protein S6e AAA_23 PF13476.6 ORF80676 - 0.0026 18.3 10.1 0.0034 17.9 10.1 1.3 1 0 0 1 1 1 1 AAA domain Sacchrp_dh_NADP PF03435.18 ORF80676 - 0.15 12.3 0.7 0.28 11.5 0.2 1.6 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain RR_TM4-6 PF06459.12 ORF80676 - 2.6 7.8 14.4 3.5 7.4 14.4 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CEP63 PF17045.5 ORF80639 - 0.00045 20.2 2.4 0.00076 19.5 2.4 1.3 1 0 0 1 1 1 1 Centrosomal protein of 63 kDa XLF PF09302.11 ORF80639 - 0.0014 18.9 1.1 0.82 9.8 0.1 2.6 2 1 1 3 3 3 2 XLF-Cernunnos, XRcc4-like factor, NHEJ component NYD-SP28 PF14772.6 ORF80639 - 0.0058 16.7 2.8 0.26 11.4 0.3 2.5 1 1 1 2 2 2 2 Sperm tail Sec8_exocyst PF04048.14 ORF80639 - 0.024 14.5 1.1 0.49 10.3 0.1 2.1 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain PDZ_1 PF12812.7 ORF80639 - 0.03 14.4 0.0 0.083 12.9 0.0 1.8 2 0 0 2 2 2 0 PDZ-like domain SPATA24 PF15175.6 ORF80639 - 0.11 12.3 5.0 1.1 9.1 0.6 2.3 1 1 1 2 2 2 0 Spermatogenesis-associated protein 24 PKcGMP_CC PF16808.5 ORF80639 - 0.38 10.6 13.3 0.82 9.6 2.6 3.8 3 1 1 4 4 4 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Zein-binding PF04576.15 ORF80639 - 2.3 8.6 8.5 1.4 9.2 0.4 3.3 2 2 1 3 3 3 0 Zein-binding zf-U11-48K PF05253.12 ORF74724 - 0.044 13.7 2.6 4.2 7.4 0.7 2.4 2 0 0 2 2 2 0 U11-48K-like CHHC zinc finger Plavaka PF18759.1 ORF74161 - 0.055 12.7 0.0 0.12 11.6 0.0 1.5 1 1 0 1 1 1 0 Plavaka transposase zf-Paramyx-P PF13008.7 ORF71490 - 0.23 10.9 2.0 16 5.1 0.1 3.9 4 1 1 5 5 5 0 Zinc-binding domain of Paramyxoviridae V protein DUF2512 PF10710.9 ORF63114 - 0.00041 20.0 5.0 1.8 8.2 0.4 3.1 3 0 0 3 3 3 3 Protein of unknown function (DUF2512) DUF3429 PF11911.8 ORF63114 - 0.019 15.2 6.2 3.3 8.0 0.2 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF3429) 4HBT_2 PF13279.6 ORF63114 - 0.036 14.5 0.0 0.17 12.3 0.0 2.0 1 1 0 1 1 1 0 Thioesterase-like superfamily HCV_NS4b PF01001.19 ORF63114 - 0.25 11.0 6.1 10 5.6 0.2 3.1 3 0 0 3 3 3 0 Hepatitis C virus non-structural protein NS4b ATP-synt_J PF04911.12 ORF63114 - 0.51 10.0 1.9 37 4.0 0.0 3.0 3 0 0 3 3 3 0 ATP synthase j chain Leuk-A4-hydro_C PF09127.11 ORF58526 - 1.3e-23 83.2 0.0 2.2e-23 82.5 0.0 1.4 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M1 PF01433.20 ORF58526 - 1.7e-11 44.1 0.1 3.1e-11 43.3 0.1 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain FliG_N PF14842.6 ORF58526 - 0.071 13.7 0.0 0.15 12.6 0.0 1.4 1 0 0 1 1 1 0 FliG N-terminal domain HHH_9 PF17674.1 ORF58075 - 0.21 12.5 0.8 0.41 11.6 0.8 1.5 1 0 0 1 1 1 0 HHH domain Anoctamin PF04547.12 ORF58075 - 0.57 9.0 2.1 11 4.7 0.1 1.9 1 1 1 2 2 2 0 Calcium-activated chloride channel Methyltransf_16 PF10294.9 ORF57072 - 8.3e-18 64.7 0.1 1.1e-17 64.3 0.1 1.1 1 0 0 1 1 1 1 Lysine methyltransferase PrmA PF06325.13 ORF57072 - 1.6e-05 24.5 0.1 1.9e-05 24.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 ORF57072 - 1.7e-05 25.4 0.1 2.6e-05 24.9 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF57072 - 2.2e-05 24.3 0.1 2.8e-05 23.9 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF57072 - 0.00012 21.7 0.0 0.00016 21.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 ORF57072 - 0.0088 16.7 0.1 0.015 15.9 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 ORF57072 - 0.029 14.0 0.0 0.042 13.5 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 NNMT_PNMT_TEMT PF01234.17 ORF57072 - 0.061 12.5 0.0 0.088 12.0 0.0 1.2 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family Torus PF16131.5 ORF49905 - 0.11 13.2 2.7 0.11 13.2 1.1 1.7 1 1 0 1 1 1 0 Torus domain zf-CXXC PF02008.20 ORF49905 - 0.51 10.4 7.7 1.8 8.6 7.7 2.0 1 1 0 1 1 1 0 CXXC zinc finger domain Thioredoxin_15 PF18403.1 ORF46216 - 0.27 11.1 4.6 0.63 9.9 1.3 2.4 2 1 0 2 2 2 0 Thioredoxin-like domain Ribosomal_L4 PF00573.22 ORF43201 - 6.9e-64 215.1 1.1 8.4e-64 214.8 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family DUF1856 PF08983.10 ORF36783 - 0.033 14.4 0.2 0.087 13.1 0.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1856) PMSR PF01625.21 ORF35510 - 7.4e-56 188.6 0.1 9.6e-56 188.2 0.1 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase zf-RING_2 PF13639.6 ORF35335 - 3.1e-12 46.6 5.6 9.2e-12 45.1 5.6 1.8 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF35335 - 2.4e-08 33.6 4.3 2.4e-08 33.6 4.3 3.1 3 1 0 3 3 3 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF35335 - 1.3e-07 31.8 6.5 1.3e-07 31.8 6.5 2.4 1 1 1 2 2 2 2 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 ORF35335 - 2.3e-07 30.7 2.8 1.4e-06 28.2 0.1 2.5 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 ORF35335 - 1.8e-06 27.6 5.4 1.8e-06 27.6 5.4 2.1 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF35335 - 3e-06 27.0 3.4 3e-06 27.0 3.4 2.3 2 1 1 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 ORF35335 - 4.1e-05 23.6 3.0 0.00015 21.7 3.0 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF35335 - 0.00011 22.0 4.1 0.00011 22.0 4.1 2.1 3 0 0 3 3 3 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 ORF35335 - 0.00034 20.4 3.6 0.00088 19.1 3.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF35335 - 0.0016 18.0 4.5 0.0016 18.0 4.5 2.1 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type FANCL_C PF11793.8 ORF35335 - 0.012 15.8 1.7 0.012 15.8 1.7 2.3 1 1 1 2 2 2 0 FANCL C-terminal domain RINGv PF12906.7 ORF35335 - 0.014 15.5 3.6 0.039 14.1 3.6 1.8 1 1 0 1 1 1 0 RING-variant domain Prok-RING_1 PF14446.6 ORF35335 - 0.025 14.5 6.1 0.13 12.2 1.1 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Prok-RING_4 PF14447.6 ORF35335 - 0.029 14.2 4.2 0.082 12.8 4.2 1.8 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 RecR PF02132.15 ORF35335 - 1.5 8.5 9.7 4.6 6.9 0.2 3.3 3 0 0 3 3 3 0 RecR protein MDMPI_N PF11716.8 ORF34193 - 0.57 10.9 6.4 0.17 12.6 1.0 2.2 2 0 0 2 2 2 0 Mycothiol maleylpyruvate isomerase N-terminal domain AGH PF17558.2 ORF32208 - 0.0056 16.8 0.3 0.016 15.4 0.0 1.9 2 0 0 2 2 2 1 Androgenic gland hormone ACT PF01842.25 ORF31632 - 4.5e-20 71.1 0.3 2.2e-09 36.9 0.2 2.3 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 ORF31632 - 0.0011 19.5 0.0 0.094 13.3 0.0 2.2 2 0 0 2 2 2 1 ACT domain ACT_6 PF13740.6 ORF31632 - 0.13 12.3 0.2 3.9 7.5 0.1 2.6 3 0 0 3 3 3 0 ACT domain DUF3116 PF11313.8 ORF26171 - 0.063 13.1 0.3 0.14 12.0 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) HRXXH PF13933.6 ORF26171 - 1.4 8.4 7.8 0.23 11.0 1.1 2.2 2 0 0 2 2 2 0 Putative peptidase family PP2C PF00481.21 ORF24275 - 5.5e-41 140.9 0.0 6.7e-41 140.6 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF24275 - 0.0023 17.9 0.0 0.058 13.3 0.0 2.1 2 0 0 2 2 2 1 Stage II sporulation protein E (SpoIIE) DUF4283 PF14111.6 ORF24275 - 0.014 14.9 0.0 0.042 13.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4283) MKT1_C PF12246.8 ORF23929 - 2.4e-09 36.8 0.1 3.2e-09 36.4 0.1 1.1 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication Wtap PF17098.5 ORF21607 - 0.25 11.3 16.6 0.36 10.7 12.6 2.9 1 1 0 1 1 1 0 WTAP/Mum2p family SLATT_1 PF18181.1 ORF21607 - 0.28 11.1 4.4 5.1 7.0 0.3 2.6 2 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 DUF641 PF04859.12 ORF21607 - 7.3 6.9 22.6 8.8 6.7 3.0 3.7 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) LRR_5 PF13306.6 ORF19910 - 0.36 10.8 6.9 0.73 9.8 3.5 2.6 2 1 0 2 2 2 0 BspA type Leucine rich repeat region (6 copies) zf-Paramyx-P PF13008.7 ORF16880 - 0.23 10.9 2.0 16 5.1 0.1 3.9 4 1 1 5 5 5 0 Zinc-binding domain of Paramyxoviridae V protein tRNA_anti-codon PF01336.25 ORF15909 - 1.2e-09 38.0 0.1 2e-09 37.3 0.1 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain ALIX_LYPXL_bnd PF13949.6 ORF15909 - 0.25 10.6 1.0 2.3 7.4 0.0 2.3 2 1 1 3 3 3 0 ALIX V-shaped domain binding to HIV Ferlin_C PF16165.5 ORF150414 - 0.037 14.0 1.2 0.062 13.2 1.2 1.4 1 0 0 1 1 1 0 Ferlin C-terminus Trm112p PF03966.16 ORF150395 - 1.2e-07 32.2 0.2 3.3e-07 30.8 0.2 1.8 1 0 0 1 1 1 1 Trm112p-like protein zf-RRN7 PF11781.8 ORF150395 - 0.078 12.7 1.2 0.15 11.8 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 2Fe-2S_thioredx PF01257.19 ORF147556 - 3.6e-53 179.3 0.6 4.8e-53 178.9 0.6 1.1 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin U3snoRNP10 PF12397.8 ORF147556 - 0.041 14.2 0.0 0.088 13.2 0.0 1.5 1 0 0 1 1 1 0 U3 small nucleolar RNA-associated protein 10 PRD PF00874.20 ORF144668 - 8.6e-12 45.2 0.0 1.6e-11 44.4 0.0 1.4 1 0 0 1 1 1 1 PRD domain L27_1 PF09058.10 ORF144668 - 0.044 13.8 0.7 0.19 11.8 0.2 2.3 2 0 0 2 2 2 0 L27_1 Cyclin_N PF00134.23 ORF143618 - 1.7e-06 27.8 1.4 0.0004 20.1 0.2 2.4 2 0 0 2 2 2 2 Cyclin, N-terminal domain TFIIB PF00382.19 ORF143618 - 0.055 13.5 0.5 2.3 8.3 0.0 2.6 2 0 0 2 2 2 0 Transcription factor TFIIB repeat DUF1839 PF08893.10 ORF142088 - 0.033 13.4 0.0 0.046 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1839) Tryp_alpha_amyl PF00234.22 ORF142088 - 0.037 14.5 1.8 0.074 13.5 1.8 1.5 1 0 0 1 1 1 0 Protease inhibitor/seed storage/LTP family MFS_2 PF13347.6 ORF137844 - 0.013 14.1 0.0 0.019 13.5 0.0 1.2 1 0 0 1 1 1 0 MFS/sugar transport protein PAM2 PF07145.15 ORF137275 - 0.0029 17.2 0.4 0.0029 17.2 0.4 2.1 2 0 0 2 2 2 1 Ataxin-2 C-terminal region Torus PF16131.5 ORF137275 - 0.1 13.3 1.1 0.19 12.4 1.1 1.4 1 0 0 1 1 1 0 Torus domain zf_CCCH_4 PF18345.1 ORF137275 - 0.2 11.8 2.8 0.4 10.8 2.8 1.5 1 0 0 1 1 1 0 Zinc finger domain Torus PF16131.5 ORF137040 - 0.11 13.2 2.7 0.11 13.2 1.1 1.7 1 1 0 1 1 1 0 Torus domain zf-CXXC PF02008.20 ORF137040 - 0.51 10.4 7.7 1.8 8.6 7.7 2.0 1 1 0 1 1 1 0 CXXC zinc finger domain Ferlin_C PF16165.5 ORF134272 - 0.036 14.0 1.2 0.062 13.2 1.2 1.4 1 0 0 1 1 1 0 Ferlin C-terminus Peptidase_M1 PF01433.20 ORF127458 - 4.1e-28 98.4 0.3 6.2e-28 97.9 0.3 1.2 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF127458 - 4.7e-16 59.5 0.4 6.3e-16 59.1 0.4 1.2 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Peptidase_M61 PF05299.12 ORF127458 - 0.0018 18.7 0.7 0.14 12.5 1.2 2.8 2 1 0 2 2 2 1 M61 glycyl aminopeptidase Peptidase_MA_2 PF13485.6 ORF127458 - 0.12 12.0 0.1 0.31 10.7 0.1 1.7 2 0 0 2 2 2 0 Peptidase MA superfamily FWWh PF14922.6 ORF127186 - 2.1e-16 60.2 3.1 2.6e-16 59.9 0.3 2.4 2 1 0 2 2 2 1 Protein of unknown function BRICHOS PF04089.14 ORF127186 - 0.029 14.6 0.5 0.058 13.6 0.5 1.5 1 0 0 1 1 1 0 BRICHOS domain Ldh_1_N PF00056.23 ORF127186 - 0.14 12.2 0.0 0.28 11.3 0.0 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain DUF4240 PF14024.6 ORF127124 - 0.17 12.1 0.2 0.5 10.5 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF4240) adh_short_C2 PF13561.6 ORF12506 - 7.5e-68 228.6 7.4 8.7e-68 228.4 7.4 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF12506 - 1.4e-61 207.4 3.4 1.7e-61 207.1 3.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF12506 - 2.1e-19 70.1 1.0 3.2e-19 69.5 1.0 1.2 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 ORF12506 - 1.6e-05 24.9 1.1 2e-05 24.5 1.1 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 ORF12506 - 3.1e-05 23.6 0.2 5e-05 22.9 0.2 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family ADH_zinc_N PF00107.26 ORF12506 - 0.016 15.2 1.0 0.036 14.0 0.2 2.0 2 0 0 2 2 2 0 Zinc-binding dehydrogenase RmlD_sub_bind PF04321.17 ORF12506 - 0.026 13.6 0.4 0.098 11.7 0.1 1.8 2 0 0 2 2 2 0 RmlD substrate binding domain DFP PF04127.15 ORF12506 - 0.13 12.1 1.4 0.4 10.5 0.3 2.1 1 1 1 2 2 2 0 DNA / pantothenate metabolism flavoprotein WD40 PF00400.32 ORF12348 - 8.6e-07 29.6 3.7 0.002 18.9 0.2 3.7 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF12348 - 3.9e-06 27.1 0.0 0.027 14.8 0.0 3.6 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain CPSF_A PF03178.15 ORF12348 - 0.0076 15.6 0.4 0.2 10.9 0.0 2.0 1 1 0 2 2 2 1 CPSF A subunit region Mcl1_mid PF12341.8 ORF12348 - 0.011 15.1 0.0 0.02 14.3 0.0 1.4 1 0 0 1 1 1 0 Minichromosome loss protein, Mcl1, middle region Ge1_WD40 PF16529.5 ORF12348 - 0.041 12.8 0.6 2.4 7.0 0.1 2.5 2 1 0 3 3 3 0 WD40 region of Ge1, enhancer of mRNA-decapping protein DUF3007 PF11460.8 ORF120039 - 0.011 15.9 0.1 0.018 15.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) Mo-co_dimer PF03404.16 ORF119797 - 1.6e-38 131.9 0.0 2.9e-38 131.0 0.0 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain Oxidored_molyb PF00174.19 ORF119797 - 2.3e-32 112.0 0.1 4.9e-32 110.9 0.1 1.5 2 0 0 2 2 2 1 Oxidoreductase molybdopterin binding domain Big_7 PF17957.1 ORF119797 - 0.096 13.5 0.0 0.16 12.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial Ig domain zf-Paramyx-P PF13008.7 ORF11831 - 0.23 10.9 2.0 16 5.1 0.1 3.9 4 1 1 5 5 5 0 Zinc-binding domain of Paramyxoviridae V protein ADP_PFK_GK PF04587.15 ORF117346 - 9.3e-29 100.2 0.2 1e-28 100.1 0.2 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region Rota_NSP3 PF01665.16 ORF117346 - 0.027 13.6 0.5 0.74 8.9 0.1 2.1 2 0 0 2 2 2 0 Rotavirus non-structural protein NSP3 dCMP_cyt_deam_2 PF08211.12 ORF114579 - 0.018 15.2 0.2 0.082 13.1 0.0 1.9 2 0 0 2 2 2 0 Cytidine and deoxycytidylate deaminase zinc-binding region NusB PF01029.18 ORF112538 - 2.6e-34 118.3 0.1 3.7e-34 117.8 0.1 1.2 1 0 0 1 1 1 1 NusB family Abhydrolase_6 PF12697.7 ORF110939 - 2e-06 28.6 0.1 2.6e-06 28.2 0.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF110939 - 0.04 13.2 0.0 0.071 12.4 0.0 1.4 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Thioesterase PF00975.20 ORF110939 - 0.087 12.9 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Thioesterase domain MRP-S34 PF16053.5 ORF110939 - 0.11 12.1 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S34 Ser_hydrolase PF06821.13 ORF110939 - 0.13 12.1 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Serine hydrolase Abhydrolase_2 PF02230.16 ORF110939 - 0.2 11.4 0.0 13 5.5 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.20 ORF110939 - 0.2 11.3 0.0 0.35 10.5 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold MMR_HSR1_Xtn PF16897.5 ORF106002 - 0.05 13.6 2.8 0.084 12.9 0.4 2.4 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain ALG11_N PF15924.5 ORF104313 - 0.038 14.0 0.0 0.059 13.4 0.0 1.2 1 0 0 1 1 1 0 ALG11 mannosyltransferase N-terminus DUF2525 PF10733.9 ORF104313 - 0.1 12.9 0.0 0.18 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2525) rOmpB PF12334.8 ORF103183 - 0.031 13.7 0.3 5.3 6.4 0.0 2.8 3 0 0 3 3 3 0 Rickettsia outer membrane protein B He_PIG_assoc PF10632.9 ORF103183 - 0.054 13.2 1.8 3.6 7.4 0.1 2.5 2 0 0 2 2 2 0 He_PIG associated, NEW1 domain of bacterial glycohydrolase Sel1 PF08238.12 ORF102702 - 6.7e-12 45.7 9.7 2.5e-07 31.1 1.3 3.6 4 0 0 4 4 4 2 Sel1 repeat Armet PF10208.9 ORF102702 - 0.026 14.4 0.0 0.044 13.7 0.0 1.3 1 0 0 1 1 1 0 Degradation arginine-rich protein for mis-folding MFS_1 PF07690.16 ORF101902 - 1.8e-25 89.6 18.2 1.8e-25 89.6 18.2 1.7 2 0 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 ORF101902 - 5e-06 25.7 12.3 5.5e-06 25.5 7.1 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter OATP PF03137.20 ORF101902 - 0.00027 19.4 4.3 0.062 11.6 0.1 2.1 1 1 1 2 2 2 2 Organic Anion Transporter Polypeptide (OATP) family MFS_2 PF13347.6 ORF101902 - 0.0065 15.1 6.7 0.012 14.2 6.7 1.5 1 1 0 1 1 1 1 MFS/sugar transport protein ENTH PF01417.20 ORF100365 - 1.7e-17 63.7 0.2 1.7e-17 63.7 0.2 1.9 2 0 0 2 2 2 1 ENTH domain CDC45 PF02724.14 ORF100365 - 0.0015 16.9 13.6 0.0016 16.8 13.6 1.1 1 0 0 1 1 1 1 CDC45-like protein Nop14 PF04147.12 ORF100365 - 0.017 13.3 18.2 0.02 13.1 18.2 1.0 1 0 0 1 1 1 0 Nop14-like family TFIIF_alpha PF05793.12 ORF100365 - 0.022 13.3 24.0 0.026 13.1 24.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) SAPS PF04499.15 ORF100365 - 0.042 12.6 7.8 0.044 12.6 7.8 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein RR_TM4-6 PF06459.12 ORF100365 - 0.065 13.1 12.8 0.081 12.7 12.8 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PPL5 PF18168.1 ORF100365 - 0.089 12.1 12.7 0.13 11.5 12.7 1.2 1 0 0 1 1 1 0 Prim-pol family 5 DDHD PF02862.17 ORF100365 - 0.16 12.1 4.3 0.22 11.7 4.3 1.3 1 0 0 1 1 1 0 DDHD domain RNA_polI_A34 PF08208.11 ORF100365 - 0.29 11.2 27.9 0.4 10.7 27.9 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 RNA_pol_Rpc4 PF05132.14 ORF100365 - 0.36 11.2 9.8 0.52 10.7 9.8 1.3 1 0 0 1 1 1 0 RNA polymerase III RPC4 Rtf2 PF04641.12 ORF100365 - 0.52 9.6 18.5 0.96 8.8 18.5 1.5 1 0 0 1 1 1 0 Rtf2 RING-finger Coilin_N PF15862.5 ORF100365 - 0.73 9.6 24.3 5.3 6.8 24.4 2.4 1 1 0 1 1 1 0 Coilin N-terminus Vfa1 PF08432.10 ORF100365 - 0.95 9.8 19.6 2.3 8.5 19.6 1.7 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 CPSF100_C PF13299.6 ORF100365 - 1 9.5 11.1 1.7 8.8 11.1 1.3 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal DUF913 PF06025.12 ORF100365 - 1.1 8.1 6.6 1.4 7.8 6.6 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) SLC12 PF03522.15 ORF100365 - 2.2 7.2 9.8 2.7 6.9 9.8 1.1 1 0 0 1 1 1 0 Solute carrier family 12 Dsh_C PF12316.8 ORF100365 - 2.7 8.4 12.0 3.7 7.9 12.0 1.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal PGA2 PF07543.12 ORF100365 - 3.1 7.8 21.1 5.6 6.9 21.1 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 GREB1 PF15782.5 ORF100365 - 4.1 4.4 7.8 4.5 4.2 7.8 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer NPR3 PF03666.13 ORF100365 - 4.1 6.1 18.6 5.7 5.6 18.6 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DUF2151 PF10221.9 ORF100365 - 4.3 5.8 10.9 5.5 5.5 10.9 1.1 1 0 0 1 1 1 0 Cell cycle and development regulator TRAP_alpha PF03896.16 ORF100365 - 4.3 6.5 11.2 6.2 5.9 11.2 1.2 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit Presenilin PF01080.17 ORF100365 - 4.4 6.0 14.9 5.8 5.6 14.9 1.1 1 0 0 1 1 1 0 Presenilin Hid1 PF12722.7 ORF100365 - 5.3 5.0 11.8 6.1 4.8 11.8 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DUF4551 PF15087.6 ORF100365 - 5.6 5.7 10.5 8.3 5.1 10.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) NOA36 PF06524.12 ORF100365 - 5.6 6.2 18.5 9.5 5.4 18.5 1.3 1 0 0 1 1 1 0 NOA36 protein MCM_bind PF09739.9 ORF100365 - 6.2 5.1 15.4 8.6 4.7 15.4 1.1 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor NARP1 PF12569.8 ORF100365 - 9.7 5.0 21.3 14 4.4 21.3 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 DENN PF02141.21 NODE_27488_length_781_cov_2.469169_g21565_i0forward_frame_1 - 4.6e-17 62.6 0.1 6.9e-17 62.0 0.1 1.2 1 0 0 1 1 1 1 DENN (AEX-3) domain AGH PF17558.2 NODE_27488_length_781_cov_2.469169_g21565_i0forward_frame_1 - 0.043 14.0 0.1 0.11 12.7 0.0 1.6 1 1 0 1 1 1 0 Androgenic gland hormone DXP_synthase_N PF13292.6 NODE_27440_length_782_cov_4.186078_g21522_i0reverse_frame_1 - 3.5e-43 147.8 0.0 6.8e-43 146.8 0.0 1.5 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase polyprenyl_synt PF00348.17 NODE_27440_length_782_cov_4.186078_g21522_i0reverse_frame_1 - 7.6e-24 84.2 0.0 1e-23 83.7 0.0 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase Arm-DNA-bind_3 PF13356.6 NODE_27440_length_782_cov_4.186078_g21522_i0reverse_frame_1 - 0.1 13.0 0.1 0.22 11.9 0.1 1.6 1 1 0 1 1 1 0 Arm DNA-binding domain RecA_dep_nuc PF16786.5 NODE_27425_length_782_cov_111.799197_g21507_i0reverse_frame_1 - 0.15 12.2 0.8 0.32 11.1 0.1 1.8 2 0 0 2 2 2 0 Recombination enhancement, RecA-dependent nuclease Ank_2 PF12796.7 NODE_27425_length_782_cov_111.799197_g21507_i0forward_frame_1 - 4.5e-38 129.7 1.0 5.1e-14 52.6 0.1 4.1 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_27425_length_782_cov_111.799197_g21507_i0forward_frame_1 - 3.3e-31 106.9 7.2 2.9e-07 30.6 0.4 6.1 2 1 4 6 6 6 5 Ankyrin repeats (many copies) Ank PF00023.30 NODE_27425_length_782_cov_111.799197_g21507_i0forward_frame_1 - 7.1e-26 89.5 5.4 0.00063 20.1 0.1 6.1 5 1 1 6 6 6 5 Ankyrin repeat Ank_4 PF13637.6 NODE_27425_length_782_cov_111.799197_g21507_i0forward_frame_1 - 2.3e-22 79.0 2.3 1.2e-09 38.5 0.0 4.4 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_27425_length_782_cov_111.799197_g21507_i0forward_frame_1 - 6.4e-22 75.3 0.1 0.0029 17.9 0.0 6.2 6 0 0 6 6 6 5 Ankyrin repeat YlzJ PF14035.6 NODE_27425_length_782_cov_111.799197_g21507_i0forward_frame_1 - 0.039 14.2 0.1 57 4.0 0.0 3.7 5 0 0 5 5 5 0 YlzJ-like protein PK_C PF02887.16 NODE_27425_length_782_cov_111.799197_g21507_i0forward_frame_1 - 0.11 12.7 0.2 3.3 8.0 0.1 2.7 3 1 0 3 3 3 0 Pyruvate kinase, alpha/beta domain Ndc80_HEC PF03801.13 NODE_27353_length_784_cov_65.510013_g21444_i0forward_frame_3 - 0.13 11.8 1.2 0.27 10.8 1.2 1.5 1 0 0 1 1 1 0 HEC/Ndc80p family Pkinase PF00069.25 NODE_27339_length_784_cov_145.168224_g21430_i0forward_frame_3 - 3.3e-13 49.6 0.2 5.1e-13 49.0 0.2 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_27339_length_784_cov_145.168224_g21430_i0forward_frame_3 - 6.1e-08 32.3 0.3 8.4e-08 31.8 0.3 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase DUF5359 PF17313.2 NODE_27325_length_784_cov_419.787717_g21417_i0reverse_frame_2 - 5.4 7.1 6.7 1.9 8.5 0.8 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5359) Adaptin_binding PF10199.9 NODE_27278_length_786_cov_2.745672_g21383_i0forward_frame_3 - 0.15 12.7 0.0 0.17 12.5 0.0 1.1 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Isochorismatase PF00857.20 NODE_27256_length_786_cov_206.571238_g21362_i0reverse_frame_2 - 3.4e-18 66.4 0.0 4.9e-18 65.9 0.0 1.3 1 0 0 1 1 1 1 Isochorismatase family V_ATPase_I PF01496.19 ORF99094 - 4.7e-73 246.5 1.0 5.5e-73 246.2 1.0 1.1 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Antimicrobial_3 PF08025.11 ORF99094 - 0.11 12.5 0.4 0.25 11.3 0.4 1.6 1 0 0 1 1 1 0 Spider antimicrobial peptide Peptidase_C48 PF02902.19 ORF9864 - 0.17 11.7 0.3 30 4.3 0.0 3.0 2 1 1 3 3 3 0 Ulp1 protease family, C-terminal catalytic domain Myb_DNA-binding PF00249.31 ORF98513 - 8.1e-26 90.0 4.9 1.8e-13 50.5 2.9 2.5 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF98513 - 1.5e-22 79.6 9.3 1.4e-14 54.1 1.7 2.6 1 1 1 2 2 2 2 Myb-like DNA-binding domain HTH_40 PF14493.6 ORF98513 - 0.042 14.3 2.1 1.2 9.6 0.4 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Myb_DNA-bind_7 PF15963.5 ORF98513 - 0.5 10.3 15.2 0.046 13.6 2.2 2.9 3 1 0 3 3 3 0 Myb DNA-binding like Myb_DNA-bind_4 PF13837.6 ORF98513 - 0.59 10.5 15.5 0.045 14.1 5.2 2.9 2 2 0 2 2 2 0 Myb/SANT-like DNA-binding domain Ribosomal_S5 PF00333.20 ORF94202 - 3.5e-26 91.0 2.4 7.1e-26 90.0 2.4 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 ORF94202 - 3.5e-25 87.2 0.1 7.4e-25 86.2 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein S5, C-terminal domain DUF5320 PF17253.2 ORF94202 - 0.94 10.6 11.9 0.81 10.8 9.3 2.2 3 0 0 3 3 3 0 Family of unknown function (DUF5320) FoP_duplication PF13865.6 ORF94202 - 2.8 8.6 16.9 5.2 7.7 16.9 1.4 1 0 0 1 1 1 0 C-terminal duplication domain of Friend of PRMT1 Fer4_14 PF13394.6 ORF90909 - 9.2e-14 51.6 0.1 1.8e-13 50.6 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 ORF90909 - 2.6e-08 34.4 0.1 5.1e-08 33.5 0.1 1.5 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 ORF90909 - 8.8e-07 29.3 0.1 1.3e-06 28.7 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain AAA_3 PF07726.11 ORF8558 - 0.047 13.6 0.1 6.5 6.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Erf4 PF10256.9 ORF80571 - 0.0064 16.6 0.5 0.95 9.6 0.0 3.2 3 1 0 3 3 3 1 Golgin subfamily A member 7/ERF4 family AA_permease PF00324.21 ORF80571 - 0.014 14.0 0.4 0.019 13.6 0.4 1.1 1 0 0 1 1 1 0 Amino acid permease Lipoprotein_3 PF00938.17 ORF79432 - 0.13 12.5 0.1 8.2 6.7 0.0 2.6 2 1 0 2 2 2 0 Lipoprotein TFIIA PF03153.13 ORF79432 - 1.4 8.8 17.0 1.6 8.6 17.0 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Troponin-I_N PF11636.8 ORF78785 - 0.0057 16.6 1.4 0.028 14.4 1.4 2.2 1 0 0 1 1 1 1 Troponin I residues 1-32 TgMIC1 PF11476.8 ORF76229 - 0.15 11.8 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 DUF2207 PF09972.9 ORF75141 - 0.0031 16.4 0.1 0.0035 16.2 0.1 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) EI24 PF07264.11 ORF75141 - 0.012 15.9 0.0 0.014 15.7 0.0 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) YebO PF13974.6 ORF75141 - 8.8 6.5 6.5 7.7 6.7 0.9 3.2 2 1 1 3 3 3 0 YebO-like protein AAA_3 PF07726.11 ORF74369 - 0.047 13.6 0.1 6.5 6.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks78.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks78.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks78.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks78.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:47 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- gp12-short_mid PF09089.10 ORF69233 - 1.5 9.0 7.2 21 5.3 0.1 3.6 4 0 0 4 4 4 0 Phage short tail fibre protein gp12, middle domain DNA_methylase PF00145.17 ORF67049 - 0.0022 17.4 0.0 0.0049 16.3 0.0 1.6 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase TPR_1 PF00515.28 ORF63064 - 3.5e-09 36.1 6.2 1.2e-08 34.4 0.0 3.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF63064 - 6.6e-08 32.1 2.5 1.1e-06 28.2 0.0 3.2 4 0 0 4 4 4 1 Tetratricopeptide repeat CKAP2_C PF15297.6 ORF63064 - 1e-05 24.8 7.4 1.4e-05 24.3 7.4 1.2 1 0 0 1 1 1 1 Cytoskeleton-associated protein 2 C-terminus TPR_8 PF13181.6 ORF63064 - 2.4e-05 24.2 0.2 0.0012 18.9 0.0 3.0 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF63064 - 6.1e-05 23.1 0.1 0.1 13.0 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TOM20_plant PF06552.12 ORF63064 - 0.01 15.6 0.2 0.032 14.0 0.2 2.0 1 1 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 TPR_11 PF13414.6 ORF63064 - 0.013 15.2 2.3 1 9.1 0.1 3.7 2 1 1 3 3 3 0 TPR repeat MIT_C PF16565.5 ORF63064 - 0.026 14.5 1.0 0.034 14.1 0.1 1.7 2 0 0 2 2 2 0 Phospholipase D-like domain at C-terminus of MIT TPR_12 PF13424.6 ORF63064 - 0.026 14.8 0.2 0.071 13.4 0.1 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat Dala_Dala_lig_C PF07478.13 ORF63064 - 0.035 13.6 0.2 0.067 12.7 0.2 1.5 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus TTC5_OB PF16669.5 ORF63064 - 0.04 13.6 0.1 0.37 10.5 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat protein 5 OB fold domain TPR_9 PF13371.6 ORF63064 - 0.045 13.9 0.0 0.13 12.4 0.0 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF60746 - 3.9e-07 29.7 7.1 0.0031 17.5 0.5 3.9 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 ORF60746 - 7.6e-06 25.5 4.2 0.061 13.0 0.1 3.9 5 0 0 5 5 5 2 TPR repeat TPR_12 PF13424.6 ORF60746 - 3e-05 24.2 2.2 0.03 14.6 0.2 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF60746 - 9.6e-05 22.8 2.5 0.17 12.4 0.2 3.1 2 2 0 2 2 2 2 Tetratricopeptide repeat Tropomyosin_1 PF12718.7 ORF60746 - 0.00095 19.3 1.8 0.00095 19.3 1.8 2.7 3 0 0 3 3 3 1 Tropomyosin like TPR_1 PF00515.28 ORF60746 - 0.00095 18.9 9.1 0.44 10.5 0.2 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF60746 - 0.0011 18.8 0.4 0.62 10.2 0.0 3.7 3 1 0 3 3 3 1 Tetratricopeptide repeat DUF3856 PF12968.7 ORF60746 - 0.0096 16.0 0.1 0.028 14.5 0.1 1.8 1 1 0 1 1 1 1 Domain of Unknown Function (DUF3856) TPR_16 PF13432.6 ORF60746 - 0.018 15.7 3.6 0.79 10.4 0.1 3.6 2 2 1 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF60746 - 0.021 15.6 2.2 1.8 9.6 0.3 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF60746 - 0.043 14.5 5.8 0.92 10.3 0.1 3.6 4 0 0 4 4 3 0 Tetratricopeptide repeat Ins_allergen_rp PF06757.13 ORF60746 - 0.049 13.6 1.0 0.29 11.1 0.1 2.7 3 1 0 3 3 3 0 Insect allergen related repeat, nitrile-specifier detoxification TPR_8 PF13181.6 ORF60746 - 0.052 13.8 6.1 0.65 10.3 0.6 3.9 3 1 0 3 3 3 0 Tetratricopeptide repeat YwqJ-deaminase PF14431.6 ORF60746 - 0.11 12.7 0.1 0.16 12.1 0.1 1.4 1 0 0 1 1 1 0 YwqJ-like deaminase FAM76 PF16046.5 ORF60746 - 0.26 10.6 2.3 0.38 10.1 2.3 1.3 1 0 0 1 1 1 0 FAM76 protein YabA PF06156.13 ORF60746 - 0.63 10.7 5.6 0.67 10.6 0.3 2.5 2 0 0 2 2 2 0 Initiation control protein YabA DUF4085 PF13315.6 ORF60746 - 0.91 9.1 4.6 0.17 11.5 0.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4085) zf-C4H2 PF10146.9 ORF60746 - 2 8.7 6.3 5.2 7.3 0.5 2.2 2 0 0 2 2 2 0 Zinc finger-containing protein CBM_20 PF00686.19 ORF59482 - 3.2e-14 52.6 0.1 6.3e-14 51.7 0.1 1.5 1 0 0 1 1 1 1 Starch binding domain AIRS_C PF02769.22 ORF58714 - 1e-21 77.7 0.0 1.3e-21 77.3 0.0 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 ORF58714 - 0.16 12.7 0.0 0.32 11.7 0.0 1.6 1 0 0 1 1 1 0 AIR synthase related protein, N-terminal domain Peptidase_S8 PF00082.22 ORF5654 - 3.5e-22 79.0 6.6 4.5e-22 78.7 6.6 1.1 1 0 0 1 1 1 1 Subtilase family SPATIAL PF15256.6 ORF55188 - 0.011 16.0 0.7 0.059 13.7 0.7 1.8 2 0 0 2 2 2 0 SPATIAL CALCOCO1 PF07888.11 ORF53923 - 0.0053 15.7 0.8 0.0068 15.3 0.8 1.2 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like DUF3209 PF11483.8 ORF53923 - 0.05 14.1 0.8 0.1 13.1 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3209) DUF3439 PF11921.8 ORF53923 - 0.061 13.3 4.6 0.043 13.8 1.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) V_ATPase_I PF01496.19 ORF53923 - 0.081 10.8 0.3 0.092 10.7 0.3 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Sod_Fe_N PF00081.22 ORF51424 - 0.0068 16.9 2.2 0.0068 16.9 2.2 2.9 3 1 0 3 3 3 1 Iron/manganese superoxide dismutases, alpha-hairpin domain APG17 PF04108.12 ORF51424 - 0.0091 15.2 0.8 0.016 14.3 0.8 1.4 1 0 0 1 1 1 1 Autophagy protein Apg17 CBM9_1 PF06452.11 ORF51424 - 4.8 7.0 8.2 0.63 9.9 3.8 1.7 2 0 0 2 2 2 0 Carbohydrate family 9 binding domain-like Troponin-I_N PF11636.8 ORF48324 - 0.0057 16.6 1.4 0.028 14.4 1.4 2.2 1 0 0 1 1 1 1 Troponin I residues 1-32 PfkB PF00294.24 ORF43677 - 5.7e-22 78.4 2.1 6e-22 78.3 0.5 1.7 2 0 0 2 2 2 1 pfkB family carbohydrate kinase CTP_transf_like PF01467.26 ORF43677 - 7.4e-16 58.6 0.0 1.1e-15 58.1 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 ORF43677 - 0.033 14.1 0.0 0.054 13.4 0.0 1.4 1 0 0 1 1 1 0 FAD synthetase SPDY PF03771.16 ORF43677 - 0.1 12.5 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF317) Pantoate_ligase PF02569.15 ORF43677 - 0.13 11.5 0.1 0.2 10.8 0.1 1.2 1 0 0 1 1 1 0 Pantoate-beta-alanine ligase MA3 PF02847.17 ORF32607 - 7.9e-25 87.0 4.6 1e-24 86.7 1.4 2.1 2 0 0 2 2 2 1 MA3 domain Macoilin PF09726.9 ORF32607 - 0.098 11.2 8.7 0.11 11.1 8.7 1.2 1 0 0 1 1 1 0 Macoilin family Nop25 PF09805.9 ORF32607 - 1.4 9.4 6.2 2.7 8.5 6.2 1.4 1 0 0 1 1 1 0 Nucleolar protein 12 (25kDa) CobT PF06213.12 ORF32607 - 1.8 7.9 8.4 2.4 7.5 8.4 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT SPATIAL PF15256.6 ORF26049 - 0.011 16.0 0.7 0.059 13.7 0.7 1.8 2 0 0 2 2 2 0 SPATIAL Ank_2 PF12796.7 ORF25249 - 8.6e-26 90.3 0.8 3.8e-12 46.6 0.1 3.5 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF25249 - 5e-20 69.5 1.8 0.00027 21.1 0.2 5.3 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 ORF25249 - 4.2e-19 68.1 6.5 0.00053 20.3 0.1 5.4 5 0 0 5 5 5 4 Ankyrin repeat Ank_4 PF13637.6 ORF25249 - 1.6e-18 66.8 4.7 6.3e-06 26.6 0.0 3.8 2 2 2 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF25249 - 6.2e-16 58.3 9.7 6.7e-05 23.1 0.0 4.9 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Troponin-I_N PF11636.8 ORF24211 - 0.0057 16.6 1.4 0.028 14.4 1.4 2.2 1 0 0 1 1 1 1 Troponin I residues 1-32 TIM PF00121.18 ORF20627 - 1e-78 264.0 0.8 1.2e-78 263.8 0.8 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase AMPK1_CBM PF16561.5 ORF20627 - 0.018 15.2 0.4 0.039 14.2 0.4 1.6 1 0 0 1 1 1 0 Glycogen recognition site of AMP-activated protein kinase TTL PF03133.15 ORF18591 - 9.3e-46 156.3 3.0 1.3e-45 155.9 3.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF18591 - 6.6e-06 25.6 0.3 0.00068 19.0 0.0 2.2 2 0 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF18591 - 0.0016 17.8 0.0 0.0027 17.0 0.0 1.4 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF18591 - 0.057 12.9 0.1 0.089 12.3 0.1 1.3 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus Bin3 PF06859.12 ORF151803 - 1.3 9.6 6.5 2.1 9.0 0.2 2.7 2 1 1 3 3 3 0 Bicoid-interacting protein 3 (Bin3) LemA PF04011.12 ORF150836 - 0.019 14.8 1.0 0.031 14.1 1.0 1.2 1 0 0 1 1 1 0 LemA family Copper-fist PF00649.18 ORF150026 - 0.015 14.8 1.1 0.015 14.8 1.1 2.7 2 0 0 2 2 2 0 Copper fist DNA binding domain Fez1 PF06818.15 ORF149873 - 0.0064 17.0 16.1 0.0064 17.0 16.1 1.8 1 1 1 2 2 2 1 Fez1 T2SSF PF00482.23 ORF149873 - 0.068 13.1 1.3 1.4 8.9 0.2 2.1 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein F ZapD PF07072.11 ORF149873 - 0.087 12.6 10.3 0.2 11.4 1.7 2.3 2 0 0 2 2 2 0 Cell division protein TMEM192 PF14802.6 ORF149873 - 0.11 11.6 14.8 0.4 9.8 4.5 2.3 1 1 1 2 2 2 0 TMEM192 family GatB_Yqey PF02637.18 ORF149873 - 0.14 12.1 7.5 0.054 13.4 2.5 2.3 2 1 0 2 2 2 0 GatB domain YtxH PF12732.7 ORF149873 - 0.28 11.7 3.8 3 8.4 1.4 3.0 1 1 1 2 2 2 0 YtxH-like protein Fib_alpha PF08702.10 ORF149873 - 0.86 9.8 21.6 0.18 12.0 3.0 2.4 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family HALZ PF02183.18 ORF149873 - 0.91 9.8 15.7 0.43 10.8 1.4 3.7 3 0 0 3 3 3 0 Homeobox associated leucine zipper Cnn_1N PF07989.11 ORF149873 - 0.99 9.6 21.0 0.21 11.7 10.9 2.7 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 DUF4407 PF14362.6 ORF149873 - 1.2 8.4 9.9 1.9 7.7 9.9 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) SlyX PF04102.12 ORF149873 - 3.1 8.5 11.3 1.1 9.9 1.9 3.2 3 1 1 4 4 4 0 SlyX DivIC PF04977.15 ORF149873 - 3.1 7.7 17.8 0.089 12.6 5.3 3.1 2 1 1 3 3 3 0 Septum formation initiator DUF4404 PF14357.6 ORF149873 - 3.9 8.2 15.2 9 7.0 4.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) Viral_alk_exo PF01771.17 ORF145660 - 0.0016 17.4 0.8 0.0022 16.9 0.3 1.4 2 0 0 2 2 2 1 Viral alkaline exonuclease SSP160 PF06933.11 ORF145275 - 0.86 7.7 3.0 1.1 7.4 3.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 NIF PF03031.18 ORF143616 - 3.2e-06 27.0 3.8 4e-05 23.4 3.8 2.3 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase DUF1666 PF07891.12 ORF143616 - 0.08 12.6 2.8 0.34 10.6 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1666) TBCA PF02970.16 ORF143616 - 0.48 10.8 3.5 0.96 9.8 0.6 2.3 1 1 1 2 2 2 0 Tubulin binding cofactor A PLDc_2 PF13091.6 ORF143314 - 7.3e-29 100.3 0.6 1.2e-28 99.6 0.6 1.4 1 0 0 1 1 1 1 PLD-like domain FAM83 PF07894.12 ORF143314 - 2.2e-05 24.2 0.8 7.7e-05 22.4 0.8 1.8 1 1 0 1 1 1 1 FAM83 A-H PLDc PF00614.22 ORF143314 - 0.00079 19.5 0.7 0.0019 18.3 0.7 1.6 1 0 0 1 1 1 1 Phospholipase D Active site motif APOBEC_C PF05240.14 ORF143314 - 0.015 15.2 0.3 0.35 10.8 0.0 2.5 2 0 0 2 2 2 0 APOBEC-like C-terminal domain AAA_3 PF07726.11 ORF139436 - 0.047 13.6 0.1 6.5 6.6 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF2779 PF11074.8 ORF139317 - 0.092 13.2 0.1 0.14 12.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function(DUF2779) DUF3573 PF12097.8 ORF139317 - 0.16 10.8 0.2 0.21 10.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) MSSP PF03940.13 ORF139317 - 5.1 6.8 16.4 26 4.5 16.4 2.0 1 1 0 1 1 1 0 Male specific sperm protein AP3D1 PF06375.11 ORF139317 - 7.4 6.8 15.0 13 6.0 15.0 1.4 1 1 0 1 1 1 0 AP-3 complex subunit delta-1 MAD PF05557.13 ORF139202 - 0.0087 14.5 7.4 0.012 14.0 7.4 1.2 1 0 0 1 1 1 1 Mitotic checkpoint protein ADIP PF11559.8 ORF139202 - 0.06 13.4 10.3 0.16 12.1 4.5 2.2 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Macoilin PF09726.9 ORF139202 - 0.71 8.4 9.5 0.9 8.0 9.5 1.2 1 0 0 1 1 1 0 Macoilin family ATG16 PF08614.11 ORF139202 - 1.5 9.0 17.8 1.7 8.8 16.7 1.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) bZIP_1 PF00170.21 ORF139202 - 2.5 8.3 12.1 15 5.8 0.7 3.1 2 1 0 2 2 2 0 bZIP transcription factor Spc24 PF08286.11 ORF139202 - 7.9 6.8 7.7 32 4.8 0.6 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 DUF5595 PF18077.1 ORF139202 - 9.5 6.4 6.6 1.5 8.9 2.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF5595) MOSC PF03473.17 ORF136494 - 8.6e-21 74.3 0.0 1.4e-20 73.6 0.0 1.3 1 0 0 1 1 1 1 MOSC domain MOSC_N PF03476.16 ORF136494 - 4.7e-12 45.8 0.0 7.8e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain DUF2862 PF11061.8 ORF130199 - 0.076 12.9 0.2 0.23 11.3 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2862) SAM35 PF10806.8 ORF130199 - 3.9 7.7 9.0 0.47 10.7 3.4 2.3 2 1 0 2 2 2 0 SAM35, subunit of SAM coomplex MOSC PF03473.17 ORF127497 - 8.6e-21 74.3 0.0 1.4e-20 73.6 0.0 1.3 1 0 0 1 1 1 1 MOSC domain MOSC_N PF03476.16 ORF127497 - 4.7e-12 45.8 0.0 7.8e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain Troponin-I_N PF11636.8 ORF123135 - 0.0057 16.6 1.4 0.028 14.4 1.4 2.2 1 0 0 1 1 1 1 Troponin I residues 1-32 JmjC PF02373.22 ORF117283 - 3.9e-38 130.4 0.1 7.9e-38 129.4 0.1 1.5 1 0 0 1 1 1 1 JmjC domain, hydroxylase Apolipoprotein PF01442.18 ORF115064 - 0.011 15.6 1.8 0.011 15.6 1.8 1.5 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain DUF4140 PF13600.6 ORF115064 - 0.53 10.7 2.4 15 6.1 0.0 2.6 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) Gaa1 PF04114.14 ORF114976 - 7.3 5.5 16.5 9.9 5.0 16.5 1.1 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component LemA PF04011.12 ORF113431 - 0.019 14.8 1.0 0.031 14.1 1.0 1.2 1 0 0 1 1 1 0 LemA family DUF4217 PF13959.6 ORF113314 - 1.2e-15 57.5 0.0 2.5e-15 56.5 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) DUF4228 PF14009.6 ORF113314 - 0.024 15.0 2.9 0.037 14.4 2.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4228) RNA_pol_Rpc4 PF05132.14 ORF113314 - 0.042 14.3 3.2 0.065 13.7 3.2 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 Borrelia_P83 PF05262.11 ORF113314 - 2.7 6.4 15.8 3.3 6.1 15.8 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Mito_carr PF00153.27 ORF106757 - 4e-52 174.1 4.2 4.8e-21 74.5 0.1 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein PsaA_PsaB PF00223.19 ORF103743 - 1.4e-44 152.5 13.6 3.8e-35 121.3 5.3 3.0 1 1 1 2 2 2 2 Photosystem I psaA/psaB protein nec1 PF10379.9 ORF10273 - 0.2 11.2 0.1 0.29 10.6 0.1 1.2 1 0 0 1 1 1 0 Virulence protein nec1 TGF_beta_GS PF08515.12 ORF10273 - 1.5 8.4 7.1 0.63 9.6 1.3 2.3 2 0 0 2 2 2 0 Transforming growth factor beta type I GS-motif XRN_N PF03159.18 NODE_27607_length_778_cov_71.668910_g21673_i0forward_frame_1 - 0.019 14.4 4.9 0.035 13.5 4.9 1.5 1 0 0 1 1 1 0 XRN 5'-3' exonuclease N-terminus Polysacc_synt_C PF14667.6 NODE_27607_length_778_cov_71.668910_g21673_i0forward_frame_1 - 0.025 14.6 1.4 0.025 14.6 1.4 3.5 2 1 1 3 3 3 0 Polysaccharide biosynthesis C-terminal domain Shisa PF13908.6 NODE_27607_length_778_cov_71.668910_g21673_i0forward_frame_1 - 0.056 13.7 0.7 0.056 13.7 0.7 2.3 1 1 0 2 2 2 0 Wnt and FGF inhibitory regulator DUF4735 PF15882.5 NODE_27607_length_778_cov_71.668910_g21673_i0forward_frame_1 - 0.1 12.1 3.6 0.12 11.8 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4735) ABC2_membrane_3 PF12698.7 NODE_27445_length_782_cov_2.511379_g21527_i0reverse_frame_2 - 2.3e-06 27.0 0.0 3e-06 26.6 0.0 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein Na_H_antiport_3 PF07399.11 NODE_27445_length_782_cov_2.511379_g21527_i0forward_frame_2 - 4.1 6.2 10.5 0.36 9.7 2.3 2.1 1 1 1 2 2 2 0 Putative Na+/H+ antiporter zf-DNA_Pol PF08996.10 NODE_27425_length_782_cov_111.799197_g21507_i0reverse_frame_3 - 0.032 14.0 2.6 0.061 13.1 0.4 2.1 1 1 1 2 2 2 0 DNA Polymerase alpha zinc finger DUF1936 PF09151.10 NODE_27425_length_782_cov_111.799197_g21507_i0reverse_frame_3 - 0.81 9.7 6.2 28 4.8 0.2 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF1936) SOAR PF16533.5 NODE_27420_length_782_cov_157.357430_g21502_i0forward_frame_2 - 0.032 14.2 1.1 0.091 12.7 1.0 1.9 1 1 0 1 1 1 0 STIM1 Orai1-activating region SKA2 PF16740.5 NODE_27420_length_782_cov_157.357430_g21502_i0forward_frame_2 - 0.043 13.6 7.6 0.14 12.0 0.2 3.1 2 1 1 3 3 3 0 Spindle and kinetochore-associated protein 2 TrmO_C PF18389.1 NODE_27420_length_782_cov_157.357430_g21502_i0forward_frame_2 - 0.22 11.7 2.5 0.27 11.4 0.1 2.3 3 0 0 3 3 3 0 TrmO C-terminal domain Uds1 PF15456.6 NODE_27420_length_782_cov_157.357430_g21502_i0forward_frame_2 - 1.1 9.4 9.3 1.2 9.2 2.9 2.7 2 2 0 2 2 2 0 Up-regulated During Septation Toxin_22 PF08092.11 ORF99392 - 2.2 8.4 6.1 7.7 6.7 0.3 2.6 2 0 0 2 2 2 0 Magi peptide toxin family Cyclin_N PF00134.23 ORF99030 - 2.4e-09 37.0 0.3 4.5e-09 36.1 0.3 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF99030 - 2.7e-09 37.6 0.1 4e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Cyclin DUF3161 PF11362.8 ORF99030 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) Cyclin_N PF00134.23 ORF98981 - 2.4e-09 37.0 0.3 4.5e-09 36.1 0.3 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF98981 - 2.7e-09 37.6 0.1 4e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Cyclin DUF3161 PF11362.8 ORF98981 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) DUF1307 PF06998.11 ORF96592 - 0.0029 17.6 0.4 0.0046 17.0 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1307) DUF2465 PF10239.9 ORF96592 - 0.037 13.3 0.9 2.9 7.0 0.0 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF2465) CcmF_C PF16327.5 ORF91263 - 3.8e-84 282.7 3.4 4.4e-84 282.5 3.4 1.0 1 0 0 1 1 1 1 Cytochrome c-type biogenesis protein CcmF C-terminal ResB PF05140.14 ORF91263 - 4e-05 22.5 1.5 0.0088 14.8 0.0 2.6 1 1 1 3 3 3 2 ResB-like family DUF2730 PF10805.8 ORF91263 - 0.045 13.9 0.0 0.21 11.7 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) DUF4516 PF14990.6 ORF91263 - 0.082 12.6 0.7 0.24 11.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4516) Cytochrom_B_C PF00032.17 ORF91263 - 0.37 11.1 3.8 0.63 10.4 3.4 1.7 1 1 0 1 1 1 0 Cytochrome b(C-terminal)/b6/petD DUF3040 PF11239.8 ORF91263 - 2.3 8.5 8.9 10 6.5 0.4 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF3040) DUF4191 PF13829.6 ORF91263 - 5 6.4 6.3 3.3 7.0 4.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4191) DUF3487 PF11990.8 ORF91263 - 8.8 6.3 9.7 4.2 7.3 6.3 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF3487) Glyco_hydro_18 PF00704.28 ORF88084 - 4.9e-11 42.9 1.9 2.5e-10 40.6 1.9 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 18 Pox_A14 PF05767.12 ORF88048 - 0.12 12.6 0.8 0.2 11.8 0.2 1.7 2 0 0 2 2 2 0 Poxvirus virion envelope protein A14 Sigma54_activat PF00158.26 ORF85285 - 1.4e-50 171.3 0.0 1.9e-50 170.8 0.0 1.2 1 0 0 1 1 1 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 ORF85285 - 3.2e-09 37.0 0.0 5.3e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain HTH_8 PF02954.19 ORF85285 - 4.4e-05 23.2 0.9 4.4e-05 23.2 0.9 2.9 3 1 0 3 3 3 1 Bacterial regulatory protein, Fis family AAA_5 PF07728.14 ORF85285 - 0.0074 16.3 0.0 0.014 15.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) HTH_50 PF18024.1 ORF85285 - 0.03 13.9 0.6 0.074 12.7 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 ORF85285 - 0.19 11.3 1.1 0.61 9.7 0.1 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_30 PF13556.6 ORF85285 - 0.41 10.5 2.3 0.44 10.4 0.0 2.2 3 0 0 3 3 3 0 PucR C-terminal helix-turn-helix domain Glyco_hydro_38C PF07748.13 ORF84813 - 6.5e-05 23.1 0.1 0.00034 20.8 0.1 1.9 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 C-terminal domain Hemerythrin PF01814.23 ORF84114 - 9.9e-11 42.4 1.4 1.6e-10 41.7 1.4 1.4 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain DAHP_synth_1 PF00793.20 ORF83765 - 2.4e-64 216.9 0.0 2.6e-64 216.7 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family LPD22 PF18834.1 ORF82503 - 0.07 13.3 0.4 7.9 6.8 0.2 2.3 2 0 0 2 2 2 0 Large polyvalent protein associated domain 22 Miff PF05644.11 ORF82503 - 0.14 11.8 2.4 0.19 11.3 1.8 1.6 1 1 1 2 2 2 0 Mitochondrial and peroxisomal fission factor Mff SAM_adeno_trans PF01887.16 ORF79195 - 5.8e-67 225.6 0.0 6.5e-67 225.4 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase ECR1_N PF14382.6 ORF76335 - 0.23 11.3 0.0 0.83 9.5 0.0 1.8 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region HATPase_c PF02518.26 ORF75010 - 9.3e-13 48.7 0.4 2.1e-12 47.5 0.4 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF75010 - 5.7e-12 45.5 0.3 2.1e-11 43.7 0.3 2.0 1 1 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF75010 - 0.06 13.2 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cyclin_N PF00134.23 ORF72552 - 2.4e-09 37.0 0.3 4.5e-09 36.1 0.3 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF72552 - 2.7e-09 37.6 0.1 4e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Cyclin DUF3161 PF11362.8 ORF72552 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) Thioredoxin PF00085.20 ORF70354 - 2.4e-25 88.5 0.0 4.2e-25 87.7 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF70354 - 0.00014 22.2 0.0 0.0012 19.3 0.0 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain HyaE PF07449.11 ORF70354 - 0.00018 21.5 0.0 0.00053 19.9 0.0 1.7 2 0 0 2 2 2 1 Hydrogenase-1 expression protein HyaE Thioredoxin_7 PF13899.6 ORF70354 - 0.0015 18.6 0.0 0.0041 17.3 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.6 ORF70354 - 0.0018 18.6 0.0 0.025 14.9 0.0 2.5 1 1 1 2 2 2 1 Thioredoxin-like TraF PF13728.6 ORF70354 - 0.0059 16.4 0.0 0.01 15.7 0.0 1.4 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_9 PF14595.6 ORF70354 - 0.0083 15.9 0.0 0.015 15.1 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin AvrM_N PF18247.1 ORF70354 - 0.011 15.7 1.5 0.02 14.8 0.2 2.1 2 1 0 2 2 2 0 Flax-rust effector AvrM N-terminal domain AhpC-TSA PF00578.21 ORF70354 - 0.055 13.4 0.0 0.23 11.4 0.0 1.9 1 1 1 2 2 2 0 AhpC/TSA family DUF1514 PF07438.11 ORF70354 - 0.64 9.9 2.1 3.4 7.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1514) Ank_2 PF12796.7 ORF69585 - 3.6e-11 43.5 0.6 0.00016 22.2 0.1 3.4 2 1 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF69585 - 4.9e-10 38.8 3.1 1.1 10.1 0.0 5.6 6 0 0 6 6 6 3 Ankyrin repeat Ank_4 PF13637.6 ORF69585 - 2.6e-08 34.2 3.3 0.31 11.7 0.2 5.5 3 1 3 6 6 6 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF69585 - 2.4e-06 27.7 4.8 2.6 8.6 0.0 5.3 4 1 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 ORF69585 - 0.00014 22.0 7.5 5.3 7.5 0.0 5.1 4 2 1 5 5 5 3 Ankyrin repeats (many copies) WAK_assoc PF14380.6 ORF67637 - 0.033 14.9 1.8 0.073 13.8 0.2 2.1 2 0 0 2 2 2 0 Wall-associated receptor kinase C-terminal TniQ PF06527.11 ORF67637 - 0.061 14.0 0.2 0.15 12.8 0.1 1.6 1 1 0 1 1 1 0 TniQ CcdA PF07362.12 ORF64295 - 0.013 15.9 0.0 0.65 10.5 0.0 2.5 2 0 0 2 2 2 0 Post-segregation antitoxin CcdA DUF2112 PF09885.9 ORF59815 - 0.14 12.2 14.1 19 5.3 0.1 5.3 6 0 0 6 6 6 0 Uncharacterized protein conserved in archaea (DUF2112) HPIP_like PF18524.1 ORF59815 - 0.49 10.2 18.3 56 3.6 0.3 6.6 6 0 0 6 6 6 0 High potential iron-sulfur protein like DUF212 PF02681.14 ORF59815 - 1.3 9.2 8.6 6.7 6.9 0.2 2.9 3 1 1 4 4 4 0 Divergent PAP2 family DUF5531 PF17671.1 ORF53529 - 0.036 14.0 0.0 0.055 13.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5531) SgrR_N PF12793.7 ORF52843 - 0.015 15.5 1.6 0.2 11.9 0.2 2.6 3 0 0 3 3 3 0 Sugar transport-related sRNA regulator N-term Pigment_DH PF06324.11 ORF52843 - 0.1 12.7 0.4 0.1 12.7 0.4 2.2 2 0 0 2 2 2 0 Pigment-dispersing hormone (PDH) DUF2341 PF10102.9 ORF52245 - 0.068 13.8 0.8 0.21 12.2 0.1 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF2341) ROK PF00480.20 ORF51439 - 8.2e-37 127.3 0.1 1e-36 126.9 0.1 1.1 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 ORF51439 - 0.002 17.2 0.6 0.0038 16.3 0.4 1.5 2 0 0 2 2 2 1 Glucokinase Tecti-min-caps PF09300.10 ORF51439 - 0.13 12.3 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 Tectiviridae, minor capsid Aldedh PF00171.22 ORF51099 - 4.4e-46 157.3 0.0 5.2e-46 157.1 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family FGGY_C PF02782.16 ORF51088 - 2.7e-20 72.9 0.1 3.4e-20 72.6 0.1 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain ACP_PD PF04336.12 ORF51088 - 0.066 13.6 0.2 0.15 12.5 0.1 1.7 2 0 0 2 2 2 0 Acyl carrier protein phosphodiesterase WW_like PF17890.1 ORF51088 - 0.11 12.6 0.0 0.41 10.8 0.0 1.9 2 0 0 2 2 2 0 Peptidoglycan hydrolase LytB WW-like domain APOBEC_C PF05240.14 ORF46955 - 0.04 13.9 0.1 0.11 12.5 0.1 1.7 1 0 0 1 1 1 0 APOBEC-like C-terminal domain DUF733 PF05306.11 ORF40792 - 7.2 7.0 9.0 2 8.8 1.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF733) ECH_1 PF00378.20 ORF40306 - 4.7e-45 153.9 0.0 5.4e-45 153.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF40306 - 5.7e-33 114.8 0.0 6.7e-33 114.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 ORF40306 - 0.098 12.6 0.3 0.22 11.5 0.3 1.5 1 0 0 1 1 1 0 Peptidase family S49 U-box PF04564.15 ORF38355 - 3.8e-09 36.6 1.3 1.6e-08 34.6 0.0 2.3 2 0 0 2 2 2 1 U-box domain BRE1 PF08647.11 ORF38355 - 0.001 19.1 11.9 0.001 19.1 11.9 2.4 2 0 0 2 2 2 1 BRE1 E3 ubiquitin ligase Jnk-SapK_ap_N PF09744.9 ORF38355 - 0.0011 19.2 10.2 0.0011 19.2 10.2 2.2 1 1 0 2 2 2 1 JNK_SAPK-associated protein-1 Prefoldin_2 PF01920.20 ORF38355 - 0.0049 16.8 1.2 0.0049 16.8 1.2 3.2 2 2 1 3 3 3 2 Prefoldin subunit Atg14 PF10186.9 ORF38355 - 0.0057 15.8 17.6 0.011 14.9 17.4 1.5 1 1 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 ADIP PF11559.8 ORF38355 - 0.0099 16.0 12.4 0.0099 16.0 12.4 2.1 2 0 0 2 2 2 1 Afadin- and alpha -actinin-Binding Myosin_tail_1 PF01576.19 ORF38355 - 0.014 13.3 18.6 0.032 12.1 18.6 1.5 1 1 0 1 1 1 0 Myosin tail FliJ PF02050.16 ORF38355 - 0.021 15.1 4.8 0.021 15.1 4.8 2.0 2 0 0 2 2 2 0 Flagellar FliJ protein T3SS_NleG PF06416.12 ORF38355 - 0.031 14.2 4.1 0.056 13.4 0.3 2.8 1 1 1 2 2 2 0 Effector protein NleG CENP-Q PF13094.6 ORF38355 - 0.045 13.9 10.3 0.072 13.3 10.2 1.5 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF4953 PF16313.5 ORF38355 - 0.073 12.3 1.4 1.1 8.4 0.8 2.2 2 0 0 2 2 2 0 Met-zincin Baculo_PEP_C PF04513.12 ORF38355 - 0.08 13.0 12.0 0.15 12.1 9.2 2.5 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF812 PF05667.11 ORF38355 - 0.084 11.7 14.6 0.12 11.2 14.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF812) HrpB7 PF09486.10 ORF38355 - 0.1 13.0 0.1 0.22 11.9 0.1 1.6 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) SlyX PF04102.12 ORF38355 - 0.12 13.0 5.4 0.73 10.5 1.7 3.4 2 1 0 2 2 2 0 SlyX Tropomyosin PF00261.20 ORF38355 - 0.18 11.1 15.3 0.41 10.0 15.3 1.5 1 1 0 1 1 1 0 Tropomyosin eIF3_N PF09440.10 ORF38355 - 0.24 11.8 10.0 0.056 13.9 4.1 2.6 2 1 0 2 2 2 0 eIF3 subunit 6 N terminal domain Uso1_p115_C PF04871.13 ORF38355 - 0.28 11.6 16.5 0.033 14.6 10.5 2.2 2 0 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF3450 PF11932.8 ORF38355 - 0.32 10.3 8.8 0.024 14.0 3.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Flagellin_N PF00669.20 ORF38355 - 0.34 11.0 5.5 0.72 10.0 5.5 1.5 1 0 0 1 1 1 0 Bacterial flagellin N-terminal helical region PspA_IM30 PF04012.12 ORF38355 - 0.35 10.4 10.4 0.54 9.8 5.8 2.3 2 0 0 2 2 2 0 PspA/IM30 family Laminin_II PF06009.12 ORF38355 - 0.36 10.9 12.7 0.089 12.8 9.3 1.8 2 0 0 2 2 1 0 Laminin Domain II DUF1216 PF06746.11 ORF38355 - 0.37 10.8 8.0 0.037 14.1 2.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1216) DUF641 PF04859.12 ORF38355 - 0.37 11.1 13.0 0.036 14.4 7.6 2.2 2 1 0 2 2 1 0 Plant protein of unknown function (DUF641) CENP-F_leu_zip PF10473.9 ORF38355 - 0.41 10.7 21.1 0.16 12.0 15.5 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 COG2 PF06148.11 ORF38355 - 0.44 10.6 8.4 0.058 13.5 3.1 2.2 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF2207 PF09972.9 ORF38355 - 0.61 8.8 3.8 0.84 8.3 3.8 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) TolA_bind_tri PF16331.5 ORF38355 - 0.62 10.2 5.5 0.58 10.3 1.1 2.5 2 0 0 2 2 2 0 TolA binding protein trimerisation DUF1664 PF07889.12 ORF38355 - 0.64 10.1 9.6 0.069 13.2 2.8 2.4 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) Cob_adeno_trans PF01923.18 ORF38355 - 0.65 10.1 3.4 0.35 11.0 0.7 1.8 2 0 0 2 2 2 0 Cobalamin adenosyltransferase Phage_HK97_TLTM PF06120.11 ORF38355 - 0.74 9.0 14.8 0.56 9.3 13.1 1.6 1 1 1 2 2 2 0 Tail length tape measure protein DUF948 PF06103.11 ORF38355 - 0.94 9.8 7.8 7.4 6.9 4.2 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Sipho_Gp157 PF05565.11 ORF38355 - 0.99 9.4 17.9 0.48 10.4 14.2 2.3 1 1 2 3 3 3 0 Siphovirus Gp157 DUF4407 PF14362.6 ORF38355 - 1 8.7 8.8 1.2 8.5 8.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF16 PF01519.16 ORF38355 - 1.1 9.8 17.0 0.22 12.1 12.5 2.1 1 1 1 2 2 2 0 Protein of unknown function DUF16 MCC-bdg_PDZ PF10506.9 ORF38355 - 1.2 9.3 6.6 0.36 10.9 2.5 2.3 2 0 0 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome ZapB PF06005.12 ORF38355 - 1.2 9.6 24.4 0.16 12.5 3.9 3.7 1 1 3 4 4 3 0 Cell division protein ZapB HMMR_N PF15905.5 ORF38355 - 1.5 8.3 23.6 2.3 7.6 23.6 1.4 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Sec34 PF04136.15 ORF38355 - 1.7 8.5 12.8 0.98 9.3 7.8 2.4 1 1 1 2 2 2 0 Sec34-like family Fib_alpha PF08702.10 ORF38355 - 1.8 8.8 18.3 3.3 7.9 10.4 3.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family TMF_TATA_bd PF12325.8 ORF38355 - 1.8 8.8 16.5 2.7 8.2 7.6 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding CENP-H PF05837.12 ORF38355 - 2.2 8.7 15.0 0.49 10.8 8.0 2.4 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Med4 PF10018.9 ORF38355 - 2.3 7.8 17.0 0.18 11.5 11.8 1.8 2 1 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Spc7 PF08317.11 ORF38355 - 2.4 7.0 18.1 0.7 8.7 14.3 1.8 1 1 1 2 2 2 0 Spc7 kinetochore protein CSN5_C PF18323.1 ORF38355 - 2.5 9.1 11.4 2.2 9.2 7.8 2.4 2 0 0 2 2 2 0 Cop9 signalosome subunit 5 C-terminal domain Tropomyosin_1 PF12718.7 ORF38355 - 2.9 8.0 19.2 0.81 9.8 12.2 2.4 2 0 0 2 2 2 0 Tropomyosin like Seryl_tRNA_N PF02403.22 ORF38355 - 3.1 8.1 21.0 6.7 7.0 16.7 2.8 2 1 0 2 2 1 0 Seryl-tRNA synthetase N-terminal domain Occludin_ELL PF07303.13 ORF38355 - 3.4 8.4 17.9 0.22 12.3 10.4 2.4 2 2 1 3 3 3 0 Occludin homology domain TMPIT PF07851.13 ORF38355 - 3.7 6.7 15.2 0.2 10.9 8.0 2.0 2 0 0 2 2 2 0 TMPIT-like protein APG6_N PF17675.1 ORF38355 - 3.7 8.1 17.4 28 5.3 16.4 2.3 1 1 0 1 1 1 0 Apg6 coiled-coil region Fez1 PF06818.15 ORF38355 - 4.8 7.6 18.4 0.54 10.7 10.3 2.1 1 1 1 2 2 2 0 Fez1 FlaC_arch PF05377.11 ORF38355 - 7.1 7.1 14.0 11 6.5 4.9 3.7 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) LMBR1 PF04791.16 ORF38355 - 7.1 5.4 8.1 8.3 5.2 8.1 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2380 PF09533.10 ORF34766 - 0.034 13.8 0.4 0.049 13.2 0.4 1.2 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) Cyclin_N PF00134.23 ORF32265 - 2.4e-09 37.0 0.3 4.5e-09 36.1 0.3 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF32265 - 2.7e-09 37.6 0.1 4e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Cyclin DUF3161 PF11362.8 ORF32265 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) DUF2380 PF09533.10 ORF30858 - 0.034 13.8 0.4 0.049 13.2 0.4 1.2 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) DUF3268 PF11672.8 ORF29093 - 0.13 12.6 0.1 0.27 11.6 0.1 1.6 1 0 0 1 1 1 0 zinc-finger-containing domain Yop-YscD_cpl PF16697.5 ORF19526 - 0.026 14.9 0.0 0.04 14.2 0.0 1.2 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain CDC45 PF02724.14 ORF19526 - 4 5.6 8.2 5.3 5.2 8.2 1.1 1 0 0 1 1 1 0 CDC45-like protein Pyridox_ox_2 PF12900.7 ORF19316 - 6.9e-31 107.1 0.0 1.4e-30 106.1 0.0 1.5 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase ELFV_dehydrog_N PF02812.18 ORF1869 - 4e-49 165.8 0.0 6.2e-49 165.2 0.0 1.2 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ELFV_dehydrog PF00208.21 ORF1869 - 0.12 12.1 0.3 0.3 10.8 0.1 1.8 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase tRNA_anti-codon PF01336.25 ORF1816 - 0.22 11.5 0.0 0.46 10.5 0.0 1.5 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain DUF4663 PF15668.5 ORF17104 - 0.063 12.3 0.2 1.8 7.5 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4663) SRPRB PF09439.10 ORF152237 - 4.9e-25 88.0 0.5 3.8e-24 85.1 0.5 1.9 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF152237 - 1.3e-09 37.9 0.3 1.8e-09 37.4 0.3 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Arf PF00025.21 ORF152237 - 1.4e-09 37.6 0.1 6.6e-09 35.5 0.1 1.8 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF152237 - 8.8e-09 35.5 0.0 2e-08 34.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 ORF152237 - 2e-08 34.0 0.0 4.7e-08 32.8 0.0 1.6 1 1 0 1 1 1 1 Ras family RsgA_GTPase PF03193.16 ORF152237 - 2.1e-05 24.5 0.3 0.062 13.2 0.1 2.2 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 ORF152237 - 9.5e-05 22.6 0.0 0.0002 21.5 0.0 1.6 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase FeoB_N PF02421.18 ORF152237 - 0.0014 18.2 0.6 0.021 14.4 0.6 2.4 1 1 0 1 1 1 1 Ferrous iron transport protein B ATP_bind_1 PF03029.17 ORF152237 - 0.0038 17.0 0.4 0.0048 16.7 0.3 1.4 1 1 0 1 1 1 1 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 ORF152237 - 0.0049 16.9 0.4 3.4 7.7 0.0 2.6 2 1 1 3 3 3 2 Dynamin family ATPase_2 PF01637.18 ORF152237 - 0.0065 16.4 0.0 0.011 15.6 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 ORF152237 - 0.0073 16.1 0.0 0.021 14.5 0.0 1.7 1 1 1 2 2 2 1 IstB-like ATP binding protein ABC_tran PF00005.27 ORF152237 - 0.016 15.7 1.7 0.26 11.8 1.7 2.2 1 1 0 1 1 1 0 ABC transporter Rad17 PF03215.15 ORF152237 - 0.019 14.9 0.0 0.031 14.2 0.0 1.4 1 1 0 1 1 1 0 Rad17 P-loop domain AAA_15 PF13175.6 ORF152237 - 0.023 14.4 1.1 0.042 13.5 1.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 ORF152237 - 0.029 14.6 0.1 0.062 13.6 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF152237 - 0.032 14.7 0.8 0.074 13.5 0.8 1.9 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF152237 - 0.039 13.5 0.0 0.082 12.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region Hpr_kinase_N PF02603.16 ORF152237 - 0.049 13.7 0.2 2.4 8.2 0.1 3.0 3 0 0 3 3 3 0 HPr Serine kinase N terminus VirJ PF06057.11 ORF152237 - 0.055 13.3 0.0 0.08 12.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial virulence protein (VirJ) PduV-EutP PF10662.9 ORF152237 - 0.094 12.5 0.1 4.2 7.1 0.0 2.4 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ABC2_membrane_3 PF12698.7 ORF152237 - 0.93 8.5 5.6 3.2 6.7 5.7 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein Vps23_core PF09454.10 ORF151916 - 0.19 11.7 0.0 0.33 10.9 0.0 1.4 1 0 0 1 1 1 0 Vps23 core domain Cyclin_N PF00134.23 ORF150841 - 2.4e-09 37.0 0.3 4.5e-09 36.1 0.3 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF150841 - 2.7e-09 37.6 0.1 4e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Cyclin DUF3161 PF11362.8 ORF150841 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) HTH_40 PF14493.6 ORF148420 - 0.53 10.8 3.0 22 5.6 0.4 3.2 2 2 1 3 3 3 0 Helix-turn-helix domain NGF PF00243.18 ORF148420 - 1.7 8.9 5.7 9.5 6.5 0.4 2.5 2 1 0 2 2 2 0 Nerve growth factor family Pyridox_ox_2 PF12900.7 ORF146784 - 6.9e-31 107.1 0.0 1.4e-30 106.1 0.0 1.5 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase SnoaL_2 PF12680.7 ORF142367 - 8.7e-09 36.0 1.7 0.0024 18.5 0.2 2.5 2 1 1 3 3 3 2 SnoaL-like domain DUF4440 PF14534.6 ORF142367 - 4.4e-08 33.5 0.2 0.0022 18.4 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF4440) Polyketide_cyc2 PF10604.9 ORF142367 - 0.012 15.8 0.3 3.7 7.8 0.0 2.5 2 1 0 2 2 2 0 Polyketide cyclase / dehydrase and lipid transport GWT1 PF06423.12 ORF140752 - 0.2 11.8 5.8 0.1 12.7 3.3 1.7 1 1 1 2 2 2 0 GWT1 ATP_transf PF09830.9 ORF140303 - 0.15 12.3 0.0 3 8.1 0.0 2.5 2 0 0 2 2 2 0 ATP adenylyltransferase DUF5531 PF17671.1 ORF13965 - 0.036 14.0 0.0 0.055 13.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5531) DUF3552 PF12072.8 ORF139589 - 0.00043 19.8 18.0 0.00043 19.8 18.0 2.4 3 1 0 3 3 3 1 Domain of unknown function (DUF3552) DUF4200 PF13863.6 ORF139589 - 0.018 15.5 4.0 0.018 15.5 4.0 4.0 4 1 1 5 5 5 0 Domain of unknown function (DUF4200) Sec20 PF03908.13 ORF139589 - 0.23 11.4 7.4 6.4 6.8 1.3 2.9 1 1 1 2 2 2 0 Sec20 Atg14 PF10186.9 ORF139589 - 2.2 7.3 20.2 0.22 10.6 15.8 1.5 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 NuA4 PF09340.10 ORF139589 - 6.7 6.7 11.8 0.17 11.8 0.5 3.1 2 1 0 2 2 2 0 Histone acetyltransferase subunit NuA4 PEARLI-4 PF05278.12 ORF139589 - 7.8 6.0 18.1 0.049 13.2 4.1 2.5 2 1 1 3 3 3 0 Arabidopsis phospholipase-like protein (PEARLI 4) Alpha_adaptinC2 PF02883.20 ORF132996 - 8.4e-26 90.5 0.0 1.1e-25 90.1 0.0 1.1 1 0 0 1 1 1 1 Adaptin C-terminal domain HycA_repressor PF11046.8 ORF131858 - 1.8e-74 248.8 1.0 2.3e-74 248.5 1.0 1.1 1 0 0 1 1 1 1 Transcriptional repressor of hyc and hyp operons RIH_assoc PF08454.11 ORF129923 - 0.0015 18.4 2.0 0.0022 17.8 0.5 2.1 2 1 0 2 2 2 1 RyR and IP3R Homology associated DUF3926 PF13080.6 ORF129923 - 0.19 11.7 0.1 0.19 11.7 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3926) Cyclin_N PF00134.23 ORF128418 - 2.4e-09 37.0 0.3 4.5e-09 36.1 0.3 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF128418 - 2.7e-09 37.6 0.1 4e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Cyclin DUF3161 PF11362.8 ORF128418 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) Cyclin_N PF00134.23 ORF1233 - 2.4e-09 37.0 0.3 4.5e-09 36.1 0.3 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF1233 - 2.7e-09 37.6 0.1 4e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Cyclin DUF3161 PF11362.8 ORF1233 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) Vma12 PF11712.8 ORF118784 - 4.3e-09 36.5 0.0 8e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 Endoplasmic reticulum-based factor for assembly of V-ATPase LptF_LptG PF03739.14 ORF118784 - 0.0015 17.4 0.0 0.0017 17.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG ATPase_gene1 PF09527.10 ORF118784 - 0.011 15.9 4.6 0.019 15.1 4.6 1.3 1 0 0 1 1 1 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DUF5423 PF17461.2 ORF118784 - 0.52 9.1 2.0 0.29 10.0 0.1 1.5 2 0 0 2 2 2 0 Family of unknown function (DUF5423) Halogen_Hydrol PF10112.9 ORF118784 - 0.63 10.0 8.0 0.25 11.4 2.7 2.3 2 1 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Pre-PUA PF17832.1 ORF118784 - 2 9.1 4.5 1.7 9.4 1.1 2.2 2 0 0 2 2 2 0 Pre-PUA-like domain FUN14 PF04930.15 ORF118784 - 2.3 8.7 6.6 5.2 7.6 2.2 2.7 1 1 1 2 2 2 0 FUN14 family DUF2380 PF09533.10 ORF116537 - 0.034 13.8 0.4 0.049 13.2 0.4 1.2 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) UCH PF00443.29 ORF11562 - 1.9e-25 89.9 0.0 1.9e-25 89.9 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 ORF11562 - 1.5e-06 28.1 0.0 1.8e-06 27.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Cyclin_N PF00134.23 ORF114160 - 2.4e-09 37.0 0.3 4.5e-09 36.1 0.3 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF114160 - 2.7e-09 37.6 0.1 4e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Cyclin DUF3161 PF11362.8 ORF114160 - 0.078 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) FUR PF01475.19 ORF113591 - 0.029 14.5 0.4 0.058 13.6 0.4 1.4 1 0 0 1 1 1 0 Ferric uptake regulator family RNaseH_like PF04308.12 ORF113591 - 0.042 13.8 0.1 0.069 13.1 0.1 1.3 1 0 0 1 1 1 0 Ribonuclease H-like DUF1201 PF06716.11 ORF113591 - 1.2 9.2 4.2 19 5.3 0.3 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1201) GHMP_kinases_C PF08544.13 ORF108047 - 3.8e-06 27.2 0.0 8.8e-06 26.0 0.0 1.6 2 0 0 2 2 2 1 GHMP kinases C terminal zf-RING_2 PF13639.6 ORF107116 - 3.8e-13 49.5 5.6 3.8e-13 49.5 5.6 2.3 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 ORF107116 - 6.3e-09 35.4 2.7 6.3e-09 35.4 2.7 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF107116 - 7.8e-07 28.8 4.3 7.8e-07 28.8 4.3 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF107116 - 2.1e-06 27.9 6.9 2.1e-06 27.9 6.9 2.1 2 1 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF107116 - 5.1e-06 26.3 4.6 5.1e-06 26.3 4.6 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF107116 - 7.4e-06 25.8 5.3 2.4e-05 24.2 5.3 2.0 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF107116 - 5.6e-05 23.1 3.6 5.6e-05 23.1 3.6 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF107116 - 5.6e-05 22.9 3.7 5.6e-05 22.9 3.7 2.6 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF107116 - 0.00016 21.5 1.6 0.00057 19.7 1.7 2.0 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 ORF107116 - 0.00043 19.9 3.0 0.001 18.7 3.0 1.6 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF107116 - 0.0025 17.9 4.6 0.0025 17.9 4.6 1.8 2 0 0 2 2 1 1 RING-variant domain Neur_chan_memb PF02932.16 ORF107116 - 0.02 15.0 0.6 0.14 12.2 0.6 2.2 1 1 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region zf-ANAPC11 PF12861.7 ORF107116 - 0.021 14.8 3.8 0.021 14.8 3.8 2.0 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 ORF107116 - 0.023 14.9 6.5 0.14 12.4 4.9 2.9 2 1 0 2 2 2 0 FANCL C-terminal domain Chordopox_A13L PF05961.11 ORF107116 - 0.05 13.8 0.1 0.05 13.8 0.1 2.9 3 0 0 3 3 3 0 Chordopoxvirus A13L protein DUF2070 PF09843.9 ORF107116 - 0.3 9.3 5.4 0.35 9.1 5.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) His_Phos_1 PF00300.22 ORF104704 - 2.9e-07 30.4 0.0 6.4e-07 29.3 0.0 1.5 2 0 0 2 2 2 1 Histidine phosphatase superfamily (branch 1) DUF1067 PF06362.11 NODE_27720_length_775_cov_159.667568_g21765_i0reverse_frame_1 - 0.007 17.1 0.3 0.014 16.1 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1067) DUF3006 PF11213.8 NODE_27666_length_777_cov_44.257412_g21724_i0reverse_frame_1 - 0.055 13.7 0.1 0.055 13.7 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3006) TERB2 PF15101.6 NODE_27666_length_777_cov_44.257412_g21724_i0reverse_frame_1 - 5.2 7.1 8.7 0.26 11.3 2.1 1.9 2 0 0 2 2 2 0 Telomere-associated protein TERB2 DUF3523 PF12037.8 NODE_27666_length_777_cov_44.257412_g21724_i0reverse_frame_1 - 9.6 5.5 26.4 6.5 6.0 6.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3523) DUF809 PF05663.11 NODE_27611_length_778_cov_6.816958_g21677_i0reverse_frame_3 - 4 7.6 4.9 3.9 7.6 1.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF809) AAA_23 PF13476.6 NODE_27611_length_778_cov_6.816958_g21677_i0forward_frame_2 - 3.9 7.9 24.6 5.8 7.4 24.6 1.3 1 0 0 1 1 1 0 AAA domain TSKS PF15358.6 NODE_27607_length_778_cov_71.668910_g21673_i0reverse_frame_3 - 0.25 9.7 0.4 0.32 9.3 0.4 1.0 1 0 0 1 1 1 0 Testis-specific serine kinase substrate PEPcase PF00311.17 NODE_27567_length_779_cov_3.668011_g21637_i0reverse_frame_2 - 0.16 10.0 0.1 0.21 9.6 0.1 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase SHIPPO-rpt PF07004.12 NODE_27567_length_779_cov_3.668011_g21637_i0reverse_frame_2 - 1.1 10.3 15.6 7.2 7.7 0.0 4.6 4 1 0 4 4 4 0 Sperm-tail PG-rich repeat SBF2 PF12335.8 NODE_27565_length_779_cov_50.094086_g21635_i0reverse_frame_2 - 8.9e-07 28.8 1.7 8.9e-07 28.8 1.7 2.0 2 1 0 2 2 2 1 Myotubularin protein Mycobact_memb PF05423.13 NODE_27565_length_779_cov_50.094086_g21635_i0reverse_frame_2 - 0.053 13.5 0.1 0.097 12.6 0.1 1.4 1 0 0 1 1 1 0 Mycobacterium membrane protein zf-C2H2_2 PF12756.7 NODE_27565_length_779_cov_50.094086_g21635_i0reverse_frame_2 - 0.083 13.2 8.9 3 8.2 0.6 3.4 3 1 0 3 3 3 0 C2H2 type zinc-finger (2 copies) Malate_synthase PF01274.22 NODE_27521_length_780_cov_88.593289_g21596_i0reverse_frame_2 - 0.09 11.0 0.2 0.11 10.7 0.2 1.1 1 0 0 1 1 1 0 Malate synthase Josephin PF02099.17 ORF98395 - 7.6e-06 26.1 0.2 5e-05 23.5 0.2 2.0 1 1 0 1 1 1 1 Josephin Peptidase_C12 PF01088.21 ORF98395 - 0.062 13.0 0.0 0.078 12.7 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase, family 1 Ribosomal_60s PF00428.19 ORF97859 - 1 10.0 7.5 2.3 8.9 7.5 1.5 1 0 0 1 1 1 0 60s Acidic ribosomal protein Helicase_C PF00271.31 ORF96668 - 9.5e-28 96.8 0.0 1.2e-27 96.4 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain IBR PF01485.21 ORF95050 - 5.3e-14 52.2 7.0 5.3e-14 52.2 7.0 3.3 3 2 0 3 3 3 1 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF95050 - 2.3e-08 34.2 6.8 2.3e-08 34.2 6.8 2.7 2 1 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF95050 - 9.9e-05 22.3 5.3 9.9e-05 22.3 5.3 2.6 2 1 1 3 3 2 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF95050 - 0.00013 21.6 5.0 0.00013 21.6 5.0 2.0 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF95050 - 0.00016 21.5 7.4 0.00016 21.5 7.4 2.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF95050 - 0.00025 20.9 5.8 0.00025 20.9 5.8 3.1 2 1 1 3 3 3 1 zinc-RING finger domain Zf_RING PF16744.5 ORF95050 - 0.0024 17.9 1.6 0.0024 17.9 1.6 3.0 3 0 0 3 3 3 1 KIAA1045 RING finger zf-ANAPC11 PF12861.7 ORF95050 - 0.0081 16.2 2.4 0.0081 16.2 2.4 2.8 1 1 2 3 3 3 1 Anaphase-promoting complex subunit 11 RING-H2 finger PHD PF00628.29 ORF95050 - 0.0091 15.9 5.7 0.0091 15.9 5.7 3.2 2 1 1 3 3 3 1 PHD-finger FANCL_C PF11793.8 ORF95050 - 0.0097 16.1 16.0 0.017 15.3 3.0 2.8 2 0 0 2 2 2 1 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 ORF95050 - 0.012 15.4 9.0 0.012 15.4 9.0 3.1 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF95050 - 0.018 14.7 1.8 0.018 14.7 1.8 2.6 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-H2C2_2 PF13465.6 ORF95050 - 0.69 10.4 9.7 2.9 8.5 0.5 3.5 3 0 0 3 3 2 0 Zinc-finger double domain DUF1168 PF06658.12 ORF95050 - 1.1 9.1 19.8 2.1 8.1 19.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Gti1_Pac2 PF09729.9 ORF95050 - 1.5 8.9 12.6 2.4 8.2 12.6 1.3 1 0 0 1 1 1 0 Gti1/Pac2 family Membralin PF09746.9 ORF95050 - 3.1 6.8 8.5 4.7 6.1 8.5 1.3 1 0 0 1 1 1 0 Tumour-associated protein zf-AN1 PF01428.16 ORF95050 - 3.4 7.9 17.9 0.59 10.3 6.9 3.3 3 1 0 3 3 2 0 AN1-like Zinc finger zf-rbx1 PF12678.7 ORF95050 - 6.3 7.2 20.0 0.067 13.5 5.9 3.3 3 1 0 3 3 3 0 RING-H2 zinc finger domain Chromo_shadow PF01393.19 ORF92198 - 0.059 13.5 1.1 15 5.8 0.0 3.1 3 0 0 3 3 3 0 Chromo shadow domain Myb_DNA-binding PF00249.31 ORF92198 - 0.078 13.2 0.1 0.23 11.7 0.1 1.9 1 0 0 1 1 1 0 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 ORF92198 - 0.2 11.6 3.6 0.26 11.2 1.1 2.5 1 1 0 2 2 2 0 Myb DNA-binding like PfkB PF00294.24 ORF90809 - 4.9e-37 127.9 1.0 5.1e-36 124.5 0.9 1.9 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 ORF90809 - 0.12 11.7 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase MeMO_Hyd_G PF02964.16 ORF8724 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain P33MONOX PF15302.6 ORF8471 - 0.13 12.0 4.5 0.22 11.2 4.5 1.3 1 0 0 1 1 1 0 P33 mono-oxygenase Amastin PF07344.11 ORF77638 - 0.018 14.9 0.9 0.038 13.8 0.9 1.5 1 0 0 1 1 1 0 Amastin surface glycoprotein Glutaredoxin PF00462.24 ORF73964 - 1.3e-06 28.5 0.0 4.9e-06 26.7 0.0 2.0 1 0 0 1 1 1 1 Glutaredoxin Armet PF10208.9 ORF73964 - 9.8e-05 22.3 0.1 0.17 11.8 0.0 2.4 3 0 0 3 3 3 2 Degradation arginine-rich protein for mis-folding DUF5364 PF17322.2 ORF73964 - 0.014 15.7 2.2 0.057 13.7 2.2 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5364) Rho_N PF07498.12 ORF73964 - 0.051 13.5 0.3 1.3 9.0 0.1 2.7 2 1 0 2 2 2 0 Rho termination factor, N-terminal domain DUF836 PF05768.14 ORF73964 - 0.12 12.8 0.0 0.37 11.2 0.0 1.8 2 0 0 2 2 2 0 Glutaredoxin-like domain (DUF836) SAP PF02037.27 ORF73964 - 0.28 11.0 5.1 4.5 7.1 0.0 4.0 5 0 0 5 5 5 0 SAP domain Mito_carr PF00153.27 ORF72234 - 5.2e-41 138.5 1.7 8.2e-18 64.1 0.1 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF3789 PF12664.7 ORF72234 - 2.4 8.0 6.3 0.15 11.8 0.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3789) IBR PF01485.21 ORF71578 - 5.3e-14 52.2 7.0 5.3e-14 52.2 7.0 3.3 3 2 0 3 3 3 1 IBR domain, a half RING-finger domain zf-RING_2 PF13639.6 ORF71578 - 2.3e-08 34.2 6.8 2.3e-08 34.2 6.8 2.7 2 1 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF71578 - 9.9e-05 22.3 5.3 9.9e-05 22.3 5.3 2.6 2 1 1 3 3 2 1 RING-type zinc-finger zf-RING_11 PF17123.5 ORF71578 - 0.00013 21.6 5.0 0.00013 21.6 5.0 2.0 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 ORF71578 - 0.00016 21.5 7.4 0.00016 21.5 7.4 2.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF71578 - 0.00025 20.9 5.8 0.00025 20.9 5.8 3.1 2 1 1 3 3 3 1 zinc-RING finger domain Zf_RING PF16744.5 ORF71578 - 0.0024 17.9 1.6 0.0024 17.9 1.6 3.0 3 0 0 3 3 3 1 KIAA1045 RING finger zf-ANAPC11 PF12861.7 ORF71578 - 0.0081 16.2 2.4 0.0081 16.2 2.4 2.8 1 1 2 3 3 3 1 Anaphase-promoting complex subunit 11 RING-H2 finger PHD PF00628.29 ORF71578 - 0.0091 15.9 5.7 0.0091 15.9 5.7 3.2 2 1 1 3 3 3 1 PHD-finger FANCL_C PF11793.8 ORF71578 - 0.0097 16.1 16.0 0.017 15.3 3.0 2.8 2 0 0 2 2 2 1 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 ORF71578 - 0.012 15.4 9.0 0.012 15.4 9.0 3.1 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF71578 - 0.018 14.7 1.8 0.018 14.7 1.8 2.6 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zf-H2C2_2 PF13465.6 ORF71578 - 0.69 10.4 9.7 2.9 8.5 0.5 3.5 3 0 0 3 3 2 0 Zinc-finger double domain DUF1168 PF06658.12 ORF71578 - 1.1 9.1 19.8 2.1 8.1 19.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Gti1_Pac2 PF09729.9 ORF71578 - 1.5 8.9 12.6 2.4 8.2 12.6 1.3 1 0 0 1 1 1 0 Gti1/Pac2 family Membralin PF09746.9 ORF71578 - 3.1 6.8 8.5 4.7 6.1 8.5 1.3 1 0 0 1 1 1 0 Tumour-associated protein zf-AN1 PF01428.16 ORF71578 - 3.4 7.9 17.9 0.59 10.3 6.9 3.3 3 1 0 3 3 2 0 AN1-like Zinc finger zf-rbx1 PF12678.7 ORF71578 - 6.3 7.2 20.0 0.067 13.5 5.9 3.3 3 1 0 3 3 3 0 RING-H2 zinc finger domain MeMO_Hyd_G PF02964.16 ORF70405 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain Glyco_transf_10 PF00852.19 ORF693 - 6.7e-45 153.0 0.0 8.3e-45 152.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 10 (fucosyltransferase) C-term DUF4762 PF15959.5 ORF69234 - 0.0083 16.1 0.1 3.1 7.8 0.0 2.6 2 0 0 2 2 2 2 Domain of unknown function (DUF4762) NiFe_hyd_SSU_C PF14720.6 ORF69234 - 0.021 15.2 3.9 0.35 11.3 0.3 2.8 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal Paramecium_SA PF01508.16 ORF69234 - 4.8 7.7 9.9 1.5 9.3 1.2 2.8 2 1 0 2 2 2 0 Paramecium surface antigen domain Ribosomal_S8e PF01201.22 ORF66298 - 1.5e-43 148.2 4.6 1.5e-43 148.2 4.6 1.9 1 1 1 2 2 2 1 Ribosomal protein S8e Kelch_6 PF13964.6 ORF6385 - 4.9e-27 93.3 7.6 2.5e-07 30.8 0.0 5.6 3 2 2 5 5 5 5 Kelch motif Kelch_4 PF13418.6 ORF6385 - 2e-21 75.7 0.6 1.5e-06 28.1 0.0 5.2 5 1 0 5 5 5 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF6385 - 1e-19 69.9 14.7 2.4e-08 33.4 0.1 6.4 6 1 0 6 6 6 4 Kelch motif Kelch_3 PF13415.6 ORF6385 - 1.7e-10 40.9 2.2 0.018 15.3 0.0 5.1 3 2 1 5 5 5 2 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF6385 - 1.9e-07 30.8 0.9 0.025 14.5 0.0 4.4 5 0 0 5 5 5 2 Kelch motif Kelch_5 PF13854.6 ORF6385 - 1.2e-05 25.1 8.9 0.12 12.3 0.1 5.3 5 1 0 5 5 5 2 Kelch motif PQQ PF01011.21 ORF6385 - 0.07 13.1 2.2 43 4.3 0.0 4.0 4 0 0 4 4 4 0 PQQ enzyme repeat GDPD PF03009.17 ORF62671 - 7.2e-13 48.9 0.3 5.4e-10 39.4 0.4 2.1 2 0 0 2 2 2 2 Glycerophosphoryl diester phosphodiesterase family DUF1600 PF07667.11 ORF62671 - 0.023 14.9 1.2 0.039 14.1 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) NicO PF03824.16 ORF61499 - 2.9 7.2 8.7 4.4 6.6 8.7 1.3 1 0 0 1 1 1 0 High-affinity nickel-transport protein stn_TNFRSF12A PF12191.8 ORF6003 - 0.14 12.4 1.4 0.2 11.9 0.2 1.8 2 0 0 2 2 2 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain Cullin_binding PF03556.15 ORF56203 - 1.3e-20 74.1 1.3 2e-20 73.4 1.3 1.3 1 0 0 1 1 1 1 Cullin binding Metallophos PF00149.28 ORF49386 - 1.2e-17 65.1 3.9 1.9e-17 64.5 3.9 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_C PF14008.6 ORF49386 - 5.6e-14 52.7 0.1 1.5e-13 51.3 0.0 1.8 2 0 0 2 2 2 1 Iron/zinc purple acid phosphatase-like protein C MeMO_Hyd_G PF02964.16 ORF49157 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain Jacalin PF01419.17 ORF47682 - 1.6e-05 24.8 0.0 0.11 12.4 0.0 2.2 2 0 0 2 2 2 2 Jacalin-like lectin domain Ubie_methyltran PF01209.18 ORF4721 - 5.1e-113 376.1 0.0 5.8e-113 376.0 0.0 1.0 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 ORF4721 - 8e-25 87.4 0.0 1.7e-24 86.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF4721 - 9.4e-23 80.7 0.0 2.1e-22 79.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF4721 - 6.5e-20 71.5 0.0 1e-19 70.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF4721 - 2.2e-17 63.4 0.0 2.9e-17 63.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF4721 - 1e-13 51.8 0.0 2.1e-13 50.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF4721 - 1.6e-06 28.1 0.0 2.5e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 ORF4721 - 0.00011 22.0 0.0 0.0002 21.1 0.0 1.5 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 ORF4721 - 0.0006 19.4 0.0 0.0012 18.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.15 ORF4721 - 0.012 15.4 0.1 0.027 14.3 0.0 1.6 2 0 0 2 2 2 0 Hypothetical methyltransferase Methyltr_RsmB-F PF01189.17 ORF4721 - 0.019 14.6 0.0 0.064 12.9 0.0 1.8 3 0 0 3 3 3 0 16S rRNA methyltransferase RsmB/F GCD14 PF08704.10 ORF4721 - 0.039 13.6 0.0 0.17 11.5 0.0 1.8 1 1 1 2 2 2 0 tRNA methyltransferase complex GCD14 subunit Rsm22 PF09243.10 ORF4721 - 0.044 13.1 0.0 0.062 12.6 0.0 1.3 1 1 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 RrnaAD PF00398.20 ORF4721 - 0.044 12.8 0.0 0.065 12.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase MetW PF07021.12 ORF4721 - 0.05 13.2 0.0 0.095 12.3 0.0 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW ADH_zinc_N PF00107.26 ORF41547 - 9.1e-21 74.2 0.1 1.7e-20 73.3 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF41547 - 0.00057 21.0 0.0 0.0011 20.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase TrkA_N PF02254.18 ORF41547 - 0.002 18.3 0.0 0.0036 17.5 0.0 1.4 1 0 0 1 1 1 1 TrkA-N domain MinC_C PF03775.16 ORF41547 - 0.0094 15.9 1.1 0.13 12.2 0.2 2.2 2 0 0 2 2 2 1 Septum formation inhibitor MinC, C-terminal domain 2-Hacid_dh_C PF02826.19 ORF41547 - 0.029 13.7 0.1 0.052 12.9 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Met_10 PF02475.16 ORF41547 - 0.042 13.6 0.0 0.08 12.7 0.0 1.4 1 1 0 1 1 1 0 Met-10+ like-protein PPR_3 PF13812.6 ORF41297 - 1.5e-07 31.4 0.0 0.0097 16.0 0.0 2.4 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR_2 PF13041.6 ORF41297 - 7.6e-06 26.0 0.0 0.18 12.0 0.0 2.9 3 0 0 3 3 3 2 PPR repeat family Smr PF01713.21 ORF41297 - 2e-05 24.9 0.1 3.8e-05 23.9 0.1 1.5 1 0 0 1 1 1 1 Smr domain PPR_long PF17177.4 ORF41297 - 0.0028 17.0 0.2 0.21 10.9 0.1 2.0 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 ORF41297 - 0.006 16.7 0.3 32 5.1 0.1 3.5 4 0 0 4 4 4 0 PPR repeat ELYS PF13934.6 ORF41297 - 0.074 13.0 0.2 0.12 12.4 0.2 1.3 1 0 0 1 1 1 0 Nuclear pore complex assembly PPR_1 PF12854.7 ORF41297 - 0.13 12.0 0.0 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 PPR repeat MeMO_Hyd_G PF02964.16 ORF40343 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain MORN PF02493.20 ORF3779 - 7e-28 94.8 54.7 4.6e-08 32.5 2.1 8.8 8 1 0 8 8 8 7 MORN repeat DUF3048_C PF17479.2 ORF3779 - 0.26 11.7 16.6 0.5 10.8 1.8 4.0 1 1 3 4 4 4 0 Protein of unknown function (DUF3048) C-terminal domain DUF448 PF04296.13 ORF3779 - 1.1 9.2 6.0 47 3.9 0.4 3.9 3 2 0 4 4 4 0 Protein of unknown function (DUF448) Cytochrome-c551 PF10643.9 ORF31783 - 0.13 11.8 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 Photosystem P840 reaction-centre cytochrome c-551 TERT_thumb PF17984.1 ORF31783 - 0.22 11.4 0.0 0.34 10.8 0.0 1.2 1 0 0 1 1 1 0 Telomerase reverse transcriptase thumb DNA binding domain A2L_zn_ribbon PF08792.10 ORF29218 - 0.073 12.8 3.5 0.16 11.7 3.5 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain MeMO_Hyd_G PF02964.16 ORF28789 - 6.7e-05 23.0 1.2 0.00011 22.3 0.3 1.8 2 0 0 2 2 2 1 Methane monooxygenase, hydrolase gamma chain PhoLip_ATPase_C PF16212.5 ORF28556 - 0.17 11.6 15.7 0.028 14.2 9.9 2.0 2 0 0 2 2 2 0 Phospholipid-translocating P-type ATPase C-terminal MscL PF01741.18 ORF28556 - 0.46 10.8 4.3 5.2 7.4 0.6 2.3 2 0 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL DUF373 PF04123.13 ORF28556 - 0.69 9.3 5.1 0.89 8.9 5.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) TMEM52 PF14979.6 ORF28556 - 1.2 9.0 4.9 0.68 9.8 2.5 1.7 2 0 0 2 2 2 0 Transmembrane 52 DHHC PF01529.20 ORF28556 - 6.4 6.9 16.9 1 9.4 8.1 2.3 1 1 1 2 2 2 0 DHHC palmitoyltransferase NPCC PF08058.11 ORF28556 - 8.3 6.5 7.3 1.1 9.3 1.3 2.3 2 1 1 3 3 3 0 Nuclear pore complex component Peptidase_C41 PF05417.11 ORF25219 - 6.2 6.6 10.3 5.6 6.8 1.5 2.9 3 0 0 3 3 3 0 Hepatitis E cysteine protease zf-RING_2 PF13639.6 ORF24277 - 5.4e-12 45.8 16.8 1.9e-11 44.1 7.8 2.2 2 0 0 2 2 2 2 Ring finger domain zf-C3HC4_2 PF13923.6 ORF24277 - 3.7e-10 39.5 16.9 4.6e-10 39.2 7.8 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF24277 - 7.9e-08 32.1 18.2 1.1e-07 31.6 8.2 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF24277 - 9.2e-08 31.8 12.1 3.1e-06 26.9 5.6 2.2 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF24277 - 2e-07 31.2 10.0 2e-07 31.2 10.0 2.6 2 1 0 2 2 2 1 RING-H2 zinc finger domain zinc_ribbon_9 PF14369.6 ORF24277 - 2.8e-07 30.7 3.4 2.8e-07 30.7 3.4 2.7 3 0 0 3 3 3 1 zinc-ribbon zf-RING_11 PF17123.5 ORF24277 - 2.7e-06 27.0 2.7 2.7e-06 27.0 2.7 2.1 3 0 0 3 3 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF24277 - 3.1e-06 27.1 0.6 3.1e-06 27.1 0.6 3.1 2 2 2 4 4 4 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF24277 - 0.00011 22.1 3.3 0.00011 22.1 3.3 2.0 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 ORF24277 - 0.0016 18.2 4.0 0.0016 18.2 4.0 2.0 2 0 0 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit Prok-RING_4 PF14447.6 ORF24277 - 0.0022 17.8 5.9 0.0022 17.8 5.9 2.3 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF24277 - 0.0029 17.5 14.6 0.0036 17.2 5.8 2.3 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF24277 - 0.0059 16.7 1.7 0.0059 16.7 1.7 2.7 2 2 0 2 2 2 1 zinc finger of C3HC4-type, RING Zn_ribbon_17 PF17120.5 ORF24277 - 0.006 16.2 4.9 0.006 16.2 4.9 1.8 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zinc_ribbon_16 PF17034.5 ORF24277 - 0.009 16.2 2.4 0.009 16.2 2.4 2.6 2 1 1 3 3 3 1 Zinc-ribbon like family RINGv PF12906.7 ORF24277 - 0.022 14.9 5.8 0.068 13.3 5.8 1.9 1 1 0 1 1 1 0 RING-variant domain zf-C3H2C3 PF17122.5 ORF24277 - 0.034 14.2 5.0 0.034 14.2 5.0 2.5 2 0 0 2 2 2 0 Zinc-finger zf-RING_4 PF14570.6 ORF24277 - 0.05 13.4 13.6 0.44 10.4 4.6 3.2 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain DZR PF12773.7 ORF24277 - 0.091 12.8 0.5 0.091 12.8 0.5 2.7 2 1 0 2 2 2 0 Double zinc ribbon zf-RING_10 PF16685.5 ORF24277 - 0.17 12.1 8.3 0.4 10.8 4.0 2.3 2 0 0 2 2 2 0 zinc RING finger of MSL2 zinc-ribbons_6 PF07191.12 ORF24277 - 0.33 11.0 7.5 5.2 7.1 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbons HypA PF01155.19 ORF24277 - 0.36 10.9 0.1 0.36 10.9 0.1 2.3 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Prok-RING_1 PF14446.6 ORF24277 - 0.73 9.8 9.3 1.5 8.8 0.2 3.3 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zf-RING_6 PF14835.6 ORF24277 - 2.2 8.2 8.8 0.16 11.8 2.1 2.2 2 0 0 2 2 2 0 zf-RING of BARD1-type protein bZIP_1 PF00170.21 ORF23834 - 1.3 9.2 9.4 0.099 12.7 2.3 2.3 2 0 0 2 2 2 0 bZIP transcription factor Pro_isomerase PF00160.21 ORF23085 - 2.5e-44 151.3 0.1 3.5e-44 150.8 0.1 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BacA PF02673.18 ORF2145 - 1.2e-73 248.0 10.8 1.5e-73 247.7 10.8 1.0 1 0 0 1 1 1 1 Bacitracin resistance protein BacA MNHE PF01899.16 ORF2145 - 0.39 10.5 12.2 0.61 9.8 4.2 2.8 3 1 0 3 3 3 0 Na+/H+ ion antiporter subunit NmrA PF05368.13 ORF20122 - 1e-14 54.7 0.0 1.8e-14 53.8 0.0 1.4 1 1 0 1 1 1 1 NmrA-like family CENP-F_leu_zip PF10473.9 ORF18612 - 0.00041 20.4 11.6 0.00083 19.4 11.6 1.5 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Atg14 PF10186.9 ORF18612 - 0.0045 16.1 7.7 0.0057 15.8 7.7 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 XhlA PF10779.9 ORF18612 - 0.029 14.6 3.6 0.11 12.7 0.5 2.4 2 0 0 2 2 2 0 Haemolysin XhlA DUF724 PF05266.14 ORF18612 - 0.055 13.3 13.2 0.078 12.8 13.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ERM PF00769.19 ORF18612 - 0.11 12.2 23.9 0.17 11.7 23.9 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Leu_zip PF15294.6 ORF18612 - 0.15 11.6 9.5 0.2 11.1 9.5 1.1 1 0 0 1 1 1 0 Leucine zipper Tropomyosin_1 PF12718.7 ORF18612 - 0.17 12.0 16.5 0.26 11.4 16.5 1.2 1 0 0 1 1 1 0 Tropomyosin like DUF3584 PF12128.8 ORF18612 - 0.2 9.1 12.5 0.24 8.8 12.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Macoilin PF09726.9 ORF18612 - 0.21 10.1 8.5 0.25 9.8 8.5 1.1 1 0 0 1 1 1 0 Macoilin family DUF1664 PF07889.12 ORF18612 - 0.29 11.2 3.4 0.55 10.3 3.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) FAM76 PF16046.5 ORF18612 - 0.33 10.3 8.5 0.47 9.8 8.5 1.2 1 0 0 1 1 1 0 FAM76 protein HAUS-augmin3 PF14932.6 ORF18612 - 0.44 10.1 12.6 0.61 9.6 12.6 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 YlqD PF11068.8 ORF18612 - 0.54 10.6 16.3 0.075 13.4 11.2 1.8 1 1 1 2 2 2 0 YlqD protein AP1AR PF15745.5 ORF18612 - 0.8 9.3 8.9 1.1 8.8 8.9 1.1 1 0 0 1 1 1 0 AP-1 complex-associated regulatory protein DUF5082 PF16888.5 ORF18612 - 1.1 9.5 18.1 0.46 10.8 8.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) OmpH PF03938.14 ORF18612 - 1.1 9.6 19.7 1.7 9.0 19.7 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) ArnB_C PF18677.1 ORF18612 - 1.5 9.0 10.6 1.1 9.4 8.6 1.8 1 1 1 2 2 2 0 Archaellum regulatory network B, C-terminal domain V_ATPase_I PF01496.19 ORF18612 - 1.7 6.4 5.0 2.1 6.2 5.0 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ZapB PF06005.12 ORF18612 - 1.9 9.0 25.1 0.091 13.2 10.0 2.6 1 1 1 2 2 2 0 Cell division protein ZapB APG6_N PF17675.1 ORF18612 - 2.3 8.8 23.6 7.9 7.0 23.6 1.9 1 1 0 1 1 1 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF18612 - 2.8 6.7 15.0 3.8 6.3 15.0 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DivIC PF04977.15 ORF18612 - 2.9 7.7 14.4 0.88 9.4 5.4 2.4 1 1 1 2 2 2 0 Septum formation initiator CENP-K PF11802.8 ORF18612 - 3.4 7.2 12.1 4.7 6.7 12.1 1.1 1 0 0 1 1 1 0 Centromere-associated protein K DUF4407 PF14362.6 ORF18612 - 4.1 6.7 16.1 0.3 10.4 6.4 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF3450 PF11932.8 ORF18612 - 4.5 6.5 16.1 6.9 5.9 16.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) AAA_13 PF13166.6 ORF18612 - 4.8 5.7 12.5 18 3.8 12.5 1.7 1 1 0 1 1 1 0 AAA domain Exonuc_VII_L PF02601.15 ORF18612 - 5.3 6.5 10.3 6.9 6.1 10.3 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Seryl_tRNA_N PF02403.22 ORF18612 - 5.6 7.2 15.1 37 4.6 15.2 2.0 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain EF-hand_1 PF00036.32 ORF18360 - 3.7e-06 26.1 0.3 7.8e-06 25.1 0.3 1.6 1 0 0 1 1 1 1 EF hand EF-hand_8 PF13833.6 ORF18360 - 7.9e-05 22.4 0.3 0.00022 21.0 0.3 1.8 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF18360 - 0.00021 21.7 0.2 0.00036 20.9 0.2 1.4 1 0 0 1 1 1 1 EF-hand domain pair Ribosomal_L13e PF01294.18 ORF18360 - 0.00061 19.7 0.3 0.038 13.8 0.0 2.5 1 1 1 2 2 2 1 Ribosomal protein L13e EF-hand_6 PF13405.6 ORF18360 - 0.0069 16.2 0.1 0.022 14.6 0.1 1.9 1 0 0 1 1 1 1 EF-hand domain EF-hand_4 PF12763.7 ORF18360 - 0.0074 16.2 0.1 0.012 15.5 0.1 1.3 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_5 PF13202.6 ORF18360 - 0.012 15.1 0.2 0.034 13.7 0.2 1.7 1 0 0 1 1 1 0 EF hand Pentapeptide_4 PF13599.6 ORF18360 - 0.16 12.1 0.0 0.29 11.3 0.0 1.3 1 0 0 1 1 1 0 Pentapeptide repeats (9 copies) SHIPPO-rpt PF07004.12 ORF152192 - 0.082 13.8 1.0 5.3 8.1 0.0 3.1 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat DUF356 PF04009.12 ORF150509 - 0.085 13.1 0.5 0.97 9.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF356) Mito_carr PF00153.27 ORF150377 - 4e-07 29.8 3.9 0.00028 20.7 0.0 3.0 3 0 0 3 3 3 2 Mitochondrial carrier protein DnaJ_C PF01556.18 ORF150175 - 9.8e-36 123.1 0.4 1.2e-35 122.7 0.4 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.19 ORF150175 - 7.5e-12 45.4 18.6 1.4e-11 44.6 18.6 1.5 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 ORF150175 - 0.0032 17.4 18.1 0.026 14.5 5.4 2.5 1 1 1 2 2 2 2 Tryptophan RNA-binding attenuator protein inhibitory protein Calycin_like PF13944.6 ORF150175 - 0.048 14.0 1.3 1.7 8.9 0.2 2.4 2 0 0 2 2 2 0 Calycin-like beta-barrel domain Yip1 PF04893.17 ORF148380 - 1.7e-12 47.4 9.0 2.6e-12 46.8 9.0 1.4 1 0 0 1 1 1 1 Yip1 domain YIF1 PF03878.15 ORF148380 - 0.0003 20.4 2.7 0.0092 15.5 2.7 2.1 1 1 0 1 1 1 1 YIF1 Wzt_C PF14524.6 ORF148380 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 Wzt C-terminal domain DUF2613 PF11021.8 ORF148380 - 0.38 10.9 0.1 0.38 10.9 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) Pkinase PF00069.25 ORF146125 - 1.2e-41 142.8 1.0 1.3e-30 106.7 0.2 2.4 1 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 ORF146125 - 9.3e-24 84.1 0.6 4.3e-19 68.8 0.3 2.2 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF146125 - 1.2e-05 24.5 0.5 1.9e-05 23.8 0.1 1.5 1 1 1 2 2 2 1 Haspin like kinase domain RIO1 PF01163.22 ORF146125 - 0.00037 20.1 0.2 0.00089 18.9 0.2 1.7 1 1 0 1 1 1 1 RIO1 family Kdo PF06293.14 ORF146125 - 0.0018 17.7 0.0 0.0027 17.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF146125 - 0.012 15.5 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kinase-like PF14531.6 ORF146125 - 0.018 14.3 0.2 0.14 11.4 0.0 2.2 2 1 1 3 3 3 0 Kinase-like Pkinase_fungal PF17667.1 ORF146125 - 0.8 8.4 5.1 0.57 8.9 0.1 2.0 1 1 1 2 2 2 0 Fungal protein kinase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks79.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks79.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks79.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks79.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:13 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Kinesin PF00225.23 ORF121597 - 6.2e-115 383.7 0.6 6.2e-115 383.7 0.6 2.7 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF121597 - 3.4e-26 92.0 0.2 3.4e-26 92.0 0.2 2.7 2 1 0 2 2 2 1 Microtubule binding RII_binding_1 PF10522.9 ORF121597 - 0.043 14.0 0.1 0.19 12.0 0.1 2.2 1 0 0 1 1 1 0 RII binding domain GTP_EFTU PF00009.27 ORF6776 - 8.7e-39 133.1 6.2 1.8e-38 132.0 0.0 3.0 3 0 0 3 3 3 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 ORF6776 - 1.1e-19 70.8 0.2 1.1e-19 70.8 0.2 2.7 3 0 0 3 3 3 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 ORF6776 - 3.5e-08 33.7 0.1 9.5e-08 32.3 0.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF6776 - 0.0012 18.9 0.0 0.0088 16.1 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase H_PPase PF03030.16 ORF98592 - 9.3e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase HrpE PF06188.12 ORF82755 - 0.24 11.3 0.1 0.24 11.3 0.1 2.6 3 0 0 3 3 3 0 HrpE/YscL/FliH and V-type ATPase subunit E TAFH PF07531.14 ORF78519 - 0.027 14.6 0.1 0.15 12.2 0.1 2.3 1 0 0 1 1 1 0 NHR1 homology to TAF Glyco_hydro_46 PF01374.18 ORF78519 - 0.41 10.2 5.2 13 5.4 0.0 3.5 2 1 1 3 3 3 0 Glycosyl hydrolase family 46 CPG4 PF15481.6 ORF78519 - 8.5 7.1 11.8 0.69 10.6 0.3 3.9 3 1 0 3 3 3 0 Chondroitin proteoglycan 4 WASH_WAHD PF11945.8 ORF62485 - 1.9e-11 44.0 15.4 1.9e-11 44.0 15.4 2.8 2 1 0 3 3 3 1 WAHD domain of WASH complex Ald_Xan_dh_C2 PF02738.18 ORF44423 - 1.4e-162 542.0 0.1 1.7e-162 541.7 0.1 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 ORF44423 - 4.2e-36 123.6 0.1 9.5e-36 122.5 0.1 1.6 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DUF4694 PF15765.5 ORF44423 - 0.13 12.3 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) LHH PF14411.6 ORF40137 - 1.2e-06 28.6 6.9 1.2e-06 28.6 6.9 2.3 2 1 0 2 2 2 1 A nuclease of the HNH/ENDO VII superfamily with conserved LHH DUF1570 PF07607.11 ORF19045 - 0.071 13.4 0.3 1.8 8.9 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1570) Anoctamin PF04547.12 ORF111477 - 2.8e-93 313.2 20.1 3.6e-93 312.9 20.1 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel Anoct_dimer PF16178.5 ORF111477 - 3.4e-07 30.2 0.0 6.3e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 Dimerisation domain of Ca+-activated chloride-channel, anoctamin DUF1772 PF08592.11 ORF111477 - 0.24 11.7 7.4 0.13 12.6 0.2 2.9 2 1 0 3 3 3 0 Domain of unknown function (DUF1772) H_PPase PF03030.16 ORF73591 - 9.2e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF71899 - 9.2e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF60445 - 9.2e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF59501 - 9.2e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF46476 - 9.2e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF42870 - 9.2e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase Acyltransferase PF01553.21 ORF1792 - 1.8e-26 92.4 0.0 3.1e-26 91.6 0.0 1.4 1 0 0 1 1 1 1 Acyltransferase SelB-wing_2 PF09106.11 ORF1792 - 0.1 12.8 0.6 1.5 9.0 0.1 3.0 3 0 0 3 3 3 0 Elongation factor SelB, winged helix H_PPase PF03030.16 ORF112750 - 9.2e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF108019 - 9.2e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase H_PPase PF03030.16 ORF105575 - 9.2e-233 774.6 22.6 1.2e-232 774.2 22.5 1.2 1 1 0 1 1 1 1 Inorganic H+ pyrophosphatase PFL-like PF02901.15 ORF82451 - 2.9e-203 677.1 0.0 3.6e-203 676.8 0.0 1.1 1 0 0 1 1 1 1 Pyruvate formate lyase-like Gly_radical PF01228.21 ORF82451 - 1e-27 96.8 0.0 2.8e-27 95.3 0.0 1.8 1 0 0 1 1 1 1 Glycine radical Ribosomal_S15 PF00312.22 ORF82451 - 0.035 14.3 0.8 1.4 9.2 0.0 2.7 2 0 0 2 2 2 0 Ribosomal protein S15 TPR_20 PF14561.6 ORF82451 - 0.37 11.2 3.3 2.9 8.3 0.1 2.9 2 1 0 2 2 2 0 Tetratricopeptide repeat zf-RING_2 PF13639.6 ORF80238 - 1.6e-11 44.3 4.8 1.6e-11 44.3 4.8 2.8 2 1 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 ORF80238 - 1.4e-07 31.2 4.2 1.4e-07 31.2 4.2 3.1 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF80238 - 2.4e-07 30.3 2.3 2.4e-07 30.3 2.3 2.0 2 0 0 2 2 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF80238 - 4.4e-07 29.6 4.4 4.4e-07 29.6 4.4 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF80238 - 6.1e-07 29.6 3.0 6.1e-07 29.6 3.0 2.8 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 ORF80238 - 3.3e-06 26.8 2.8 3.3e-06 26.8 2.8 2.8 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF80238 - 2.4e-05 24.2 3.5 2.4e-05 24.2 3.5 2.8 3 0 0 3 3 3 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 ORF80238 - 3.7e-05 23.7 4.8 0.00011 22.1 4.8 1.9 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF80238 - 0.00013 21.7 4.2 0.0012 18.7 1.8 2.8 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 CDC48_2 PF02933.17 ORF80238 - 0.014 15.1 0.0 1.2 9.0 0.0 2.5 2 0 0 2 2 2 0 Cell division protein 48 (CDC48), domain 2 zf-ANAPC11 PF12861.7 ORF80238 - 0.042 13.9 4.5 0.27 11.3 0.8 2.6 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf_Rg PF17915.1 ORF80238 - 0.16 11.4 2.3 1.8 8.0 1.3 2.6 2 0 0 2 2 2 0 Reverse gyrase zinc finger zf-Nse PF11789.8 ORF80238 - 0.21 11.5 1.5 0.56 10.1 1.5 1.8 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_ribbon_17 PF17120.5 ORF80238 - 1.1 9.0 13.0 0.043 13.4 4.3 2.7 3 0 0 3 3 2 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 ORF80238 - 2.4 8.3 8.4 0.32 11.1 3.7 2.1 2 0 0 2 2 1 0 RING-variant domain FANCL_C PF11793.8 ORF80238 - 9.2 6.5 15.7 4.7 7.5 5.3 3.8 3 1 0 3 3 3 0 FANCL C-terminal domain Peptidase_M16_M PF16187.5 ORF15053 - 2.2e-72 243.7 0.1 1.1e-71 241.4 0.0 2.2 3 0 0 3 3 3 1 Middle or third domain of peptidase_M16 Peptidase_M16_C PF05193.21 ORF15053 - 6.7e-08 32.8 0.1 0.0048 16.9 0.0 2.8 3 0 0 3 3 3 2 Peptidase M16 inactive domain Ly-6_related PF06579.12 ORF15053 - 0.03 14.6 0.0 0.07 13.4 0.0 1.5 1 0 0 1 1 1 0 Caenorhabditis elegans ly-6-related protein PAS_11 PF14598.6 ORF43119 - 0.004 17.3 0.1 0.039 14.1 0.0 2.4 2 0 0 2 2 2 1 PAS domain Toxin_23 PF08093.11 ORF43119 - 0.3 11.2 1.3 0.64 10.2 1.3 1.5 1 0 0 1 1 1 0 Magi 5 toxic peptide family DUF4064 PF13273.6 ORF108551 - 0.13 12.5 0.0 0.82 10.0 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) JIP_LZII PF16471.5 ORF108551 - 0.14 12.4 0.0 0.14 12.4 0.0 2.9 4 0 0 4 4 4 0 JNK-interacting protein leucine zipper II Mucin PF01456.17 ORF108551 - 0.18 11.8 34.0 0.82 9.7 15.9 3.4 3 0 0 3 3 3 0 Mucin-like glycoprotein Tox-SHH PF15652.6 ORF108551 - 7.4 7.6 7.7 15 6.6 1.1 3.3 3 0 0 3 3 3 0 HNH/Endo VII superfamily toxin with a SHH signature EF-hand_7 PF13499.6 ORF99720 - 2.3e-18 66.4 21.8 6.5e-06 26.5 1.2 5.7 5 1 0 5 5 5 4 EF-hand domain pair EF-hand_1 PF00036.32 ORF99720 - 1e-15 56.0 17.0 0.0029 17.0 0.6 7.7 7 1 0 7 7 7 5 EF hand EF-hand_6 PF13405.6 ORF99720 - 7e-15 53.6 20.7 0.013 15.3 1.1 9.3 7 2 2 9 9 9 5 EF-hand domain EF-hand_5 PF13202.6 ORF99720 - 5.6e-09 35.1 12.7 0.067 12.7 0.0 6.3 7 0 0 7 7 7 3 EF hand EF-hand_8 PF13833.6 ORF99720 - 1.3e-08 34.5 12.1 0.29 11.0 0.8 5.7 5 0 0 5 5 5 4 EF-hand domain pair EF-hand_11 PF08976.11 ORF99720 - 0.2 12.6 1.3 1.3 9.9 0.0 2.9 3 0 0 3 3 3 0 EF-hand domain tRNA-synt_1c PF00749.21 ORF79667 - 7.4e-112 373.3 0.8 1.1e-111 372.7 0.8 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA_synt_1c_R1 PF04558.15 ORF79667 - 4.2e-42 143.9 0.4 7.3e-42 143.1 0.4 1.4 1 0 0 1 1 1 1 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 tRNA-synt_1c_C PF03950.18 ORF79667 - 2.5e-36 125.2 0.0 5.9e-36 124.0 0.0 1.7 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain U79_P34 PF03064.16 ORF79667 - 0.033 13.5 5.9 0.064 12.6 5.9 1.4 1 0 0 1 1 1 0 HSV U79 / HCMV P34 Dimer_Tnp_Tn5 PF02281.16 ORF61302 - 1.3e-20 73.0 0.2 3.1e-20 71.8 0.2 1.5 1 0 0 1 1 1 1 Transposase Tn5 dimerisation domain DDE_Tnp_1 PF01609.21 ORF61302 - 1.5e-17 63.9 0.0 3e-17 63.0 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain Tnp_DNA_bind PF14706.6 ORF61302 - 7.2e-15 54.6 0.0 1.8e-14 53.3 0.0 1.8 1 0 0 1 1 1 1 Transposase DNA-binding Intein_splicing PF14890.6 ORF61302 - 3.4e-09 36.8 0.0 5.4e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 Intein splicing domain CBM_5_12 PF02839.14 ORF61302 - 0.97 10.1 5.1 0.3 11.8 0.6 2.6 2 0 0 2 2 2 0 Carbohydrate binding domain Dimer_Tnp_Tn5 PF02281.16 ORF57513 - 1.3e-20 73.0 0.2 3.1e-20 71.8 0.2 1.5 1 0 0 1 1 1 1 Transposase Tn5 dimerisation domain DDE_Tnp_1 PF01609.21 ORF57513 - 1.5e-17 63.9 0.0 3e-17 63.0 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain Tnp_DNA_bind PF14706.6 ORF57513 - 7.2e-15 54.6 0.0 1.8e-14 53.3 0.0 1.8 1 0 0 1 1 1 1 Transposase DNA-binding Intein_splicing PF14890.6 ORF57513 - 3.4e-09 36.8 0.0 5.4e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 Intein splicing domain CBM_5_12 PF02839.14 ORF57513 - 0.97 10.1 5.1 0.3 11.8 0.6 2.6 2 0 0 2 2 2 0 Carbohydrate binding domain Dimer_Tnp_Tn5 PF02281.16 ORF146184 - 1.3e-20 73.0 0.2 3.1e-20 71.8 0.2 1.5 1 0 0 1 1 1 1 Transposase Tn5 dimerisation domain DDE_Tnp_1 PF01609.21 ORF146184 - 1.5e-17 63.9 0.0 3e-17 63.0 0.0 1.5 1 0 0 1 1 1 1 Transposase DDE domain Tnp_DNA_bind PF14706.6 ORF146184 - 7.2e-15 54.6 0.0 1.8e-14 53.3 0.0 1.8 1 0 0 1 1 1 1 Transposase DNA-binding Intein_splicing PF14890.6 ORF146184 - 3.4e-09 36.8 0.0 5.4e-09 36.1 0.0 1.3 1 0 0 1 1 1 1 Intein splicing domain CBM_5_12 PF02839.14 ORF146184 - 0.97 10.1 5.1 0.3 11.8 0.6 2.6 2 0 0 2 2 2 0 Carbohydrate binding domain Cse1 PF08506.10 ORF87756 - 4.2e-06 25.9 0.2 4.2e-06 25.9 0.2 3.3 3 1 1 4 4 4 1 Cse1 DUF5033 PF16436.5 ORF87756 - 0.051 13.5 0.0 0.24 11.3 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5033) DNA_pol3_tau_4 PF12168.8 ORF87756 - 0.16 12.5 0.1 0.3 11.6 0.1 1.3 1 0 0 1 1 1 0 DNA polymerase III subunits tau domain IV DnaB-binding PDEase_I PF00233.19 ORF84481 - 2.9e-74 249.8 1.2 6.7e-74 248.6 1.2 1.7 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Ion_trans PF00520.31 ORF84481 - 1.1e-12 47.7 8.9 1.8e-12 47.1 8.9 1.3 1 0 0 1 1 1 1 Ion transport protein DUF5444 PF17519.2 ORF84481 - 0.085 12.9 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5444) ATP-gua_Ptrans PF00217.19 ORF61446 - 1.4e-39 135.8 0.0 2.9e-32 111.9 0.0 2.2 2 0 0 2 2 2 2 ATP:guanido phosphotransferase, C-terminal catalytic domain ATP-gua_PtransN PF02807.15 ORF61446 - 4.1e-13 49.5 0.1 3.9e-06 27.2 0.0 2.6 2 0 0 2 2 2 2 ATP:guanido phosphotransferase, N-terminal domain HMG-CoA_red PF00368.18 ORF96977 - 7.2e-93 311.5 1.2 9.5e-93 311.1 1.2 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase IQ PF00612.27 ORF76603 - 0.014 15.1 3.2 0.031 14.1 3.2 1.6 1 0 0 1 1 1 0 IQ calmodulin-binding motif PhetRS_B1 PF18262.1 ORF76603 - 0.39 11.0 6.2 0.17 12.1 1.2 3.1 2 0 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain PDEase_I PF00233.19 ORF74620 - 1.4e-69 234.5 5.0 1.4e-69 234.5 5.0 2.1 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase Ion_trans PF00520.31 ORF74620 - 0.00014 21.2 10.9 0.00028 20.2 10.9 1.5 1 0 0 1 1 1 1 Ion transport protein AAA_23 PF13476.6 ORF74620 - 4.8 7.6 21.4 0.056 13.9 5.6 3.0 3 0 0 3 3 3 0 AAA domain Apis_Csd PF11671.8 ORF74620 - 8 6.5 6.9 20 5.2 6.9 1.6 1 0 0 1 1 1 0 Complementary sex determiner protein ABC_tran PF00005.27 ORF152215 - 1.6e-36 125.9 0.1 8.2e-27 94.4 0.0 2.6 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 ORF152215 - 2.6e-21 76.5 16.2 3.8e-21 76.0 16.2 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 ORF152215 - 6.3e-10 38.9 4.3 0.00026 20.5 0.4 3.5 3 0 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF152215 - 7.2e-07 29.3 2.1 0.21 11.3 0.1 4.1 2 2 2 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system DUF87 PF01935.17 ORF152215 - 0.0041 17.3 0.1 0.0041 17.3 0.1 2.3 2 0 0 2 2 2 1 Helicase HerA, central domain DUF2207 PF09972.9 ORF152215 - 0.06 12.1 9.6 0.65 8.7 9.6 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) MMR_HSR1 PF01926.23 ORF152215 - 0.081 13.0 0.0 0.24 11.5 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase ADK PF00406.22 ORF78958 - 2e-22 79.9 4.6 2.5e-10 40.7 0.1 5.3 5 0 0 5 5 5 4 Adenylate kinase AAA_17 PF13207.6 ORF78958 - 1.5e-15 57.9 5.2 5.8e-08 33.3 0.0 4.9 4 1 0 4 4 4 2 AAA domain AAA_18 PF13238.6 ORF78958 - 1.7e-09 38.3 0.2 3e-07 31.0 0.0 3.4 3 0 0 3 3 3 1 AAA domain AAA_33 PF13671.6 ORF78958 - 1e-05 25.7 0.0 0.00012 22.3 0.0 2.5 3 0 0 3 3 3 1 AAA domain AAA_28 PF13521.6 ORF78958 - 5.9e-05 23.4 0.0 0.00016 22.0 0.0 1.8 1 0 0 1 1 1 1 AAA domain T2SSE PF00437.20 ORF78958 - 0.0053 15.9 0.0 0.011 14.8 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein CoaE PF01121.20 ORF78958 - 0.016 14.9 0.0 0.074 12.7 0.0 2.2 2 0 0 2 2 2 0 Dephospho-CoA kinase dNK PF01712.19 ORF78958 - 0.046 13.6 1.9 0.6 9.9 0.0 3.0 3 0 0 3 3 3 0 Deoxynucleoside kinase CPT PF07931.12 ORF78958 - 0.062 13.1 0.0 0.31 10.9 0.0 2.1 2 1 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein PPDK_N PF01326.19 ORF7494 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF7494 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF7494 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF7494 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase Guanylate_cyc PF00211.20 ORF72118 - 3.9e-86 287.4 7.9 7e-44 149.6 1.7 2.3 2 0 0 2 2 2 2 Adenylate and Guanylate cyclase catalytic domain DUF559 PF04480.12 ORF72118 - 0.0068 16.3 0.8 1.8 8.5 0.0 3.3 2 1 1 3 3 3 2 Protein of unknown function (DUF559) EpsG PF14897.6 ORF72118 - 1.5 8.0 27.4 4.3 6.6 19.4 2.2 1 1 1 2 2 2 0 EpsG family Tmemb_9 PF05434.11 ORF71561 - 0.0015 18.4 0.7 0.0072 16.2 0.1 2.5 2 0 0 2 2 2 1 TMEM9 DUF2205 PF10224.9 ORF71561 - 0.031 14.3 0.3 0.031 14.3 0.3 2.8 2 1 1 3 3 3 0 Short coiled-coil protein AA_permease PF00324.21 ORF71561 - 0.039 12.5 0.5 0.066 11.8 0.5 1.3 1 0 0 1 1 1 0 Amino acid permease SSP160 PF06933.11 ORF71561 - 0.095 10.9 10.6 0.14 10.3 10.6 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DpnI_C PF17726.1 ORF71561 - 0.11 12.6 1.2 1.3 9.2 0.1 2.7 2 0 0 2 2 2 0 Dam-replacing HTH domain Claudin_2 PF13903.6 ORF71561 - 8.3 6.1 6.0 8.3 6.1 0.2 2.7 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction PPDK_N PF01326.19 ORF67083 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF67083 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF67083 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF67083 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase STT3 PF02516.14 ORF53294 - 1.2e-113 380.6 35.1 1.6e-111 373.7 35.1 2.1 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF4710 PF15828.5 ORF53294 - 8.8 6.5 8.0 24 5.2 8.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) EF-hand_7 PF13499.6 ORF48527 - 2.1e-24 85.8 24.6 1.1e-06 29.0 3.2 4.8 4 0 0 4 4 4 4 EF-hand domain pair EF-hand_8 PF13833.6 ORF48527 - 3.4e-16 58.8 18.0 2.1e-05 24.3 0.7 5.1 5 0 0 5 5 5 4 EF-hand domain pair EF-hand_1 PF00036.32 ORF48527 - 6.7e-13 47.2 24.6 0.0024 17.3 0.5 7.2 8 0 0 8 8 8 4 EF hand EF-hand_6 PF13405.6 ORF48527 - 1.2e-08 34.2 25.7 0.2 11.7 0.2 8.6 7 1 2 9 9 9 5 EF-hand domain EF-hand_5 PF13202.6 ORF48527 - 0.00021 20.7 5.0 0.022 14.3 0.1 4.5 4 0 0 4 4 4 1 EF hand SPARC_Ca_bdg PF10591.9 ORF48527 - 0.0058 16.9 11.0 0.057 13.7 0.9 4.0 4 0 0 4 4 4 2 Secreted protein acidic and rich in cysteine Ca binding region TAF1_subA PF14929.6 ORF48527 - 0.0061 16.0 0.6 1.4 8.3 0.0 2.7 2 1 0 3 3 3 1 TAF RNA Polymerase I subunit A EF-hand_9 PF14658.6 ORF48527 - 0.023 15.0 0.8 8 6.9 0.0 4.0 4 0 0 4 4 4 0 EF-hand domain Clr5 PF14420.6 ORF48527 - 0.37 11.1 2.8 35 4.7 0.0 3.6 3 0 0 3 3 3 0 Clr5 domain Nse4-Nse3_bdg PF15412.6 ORF48527 - 0.5 10.5 2.6 18 5.6 0.0 2.7 2 0 0 2 2 2 0 Binding domain of Nse4/EID3 to Nse3-MAGE PPDK_N PF01326.19 ORF148825 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF148825 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF148825 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF148825 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase STT3 PF02516.14 ORF137268 - 1.2e-113 380.6 35.1 1.6e-111 373.7 35.1 2.1 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF4710 PF15828.5 ORF137268 - 8.8 6.5 8.0 24 5.2 8.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) PPDK_N PF01326.19 ORF133680 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF133680 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF133680 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF133680 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase FtsJ PF01728.19 ORF122238 - 1.1e-06 28.9 0.2 2.1e-05 24.7 0.0 2.4 2 1 0 2 2 2 1 FtsJ-like methyltransferase PPDK_N PF01326.19 ORF121778 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF121778 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF121778 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF121778 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase PPDK_N PF01326.19 ORF113987 - 4.2e-101 338.5 0.2 5.6e-101 338.1 0.2 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 ORF113987 - 9.2e-61 205.5 0.0 1.3e-60 205.0 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 ORF113987 - 1.9e-27 94.8 0.3 3.7e-27 93.8 0.3 1.5 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Polysacc_deac_2 PF04748.13 ORF113987 - 0.081 12.1 0.0 0.16 11.1 0.0 1.4 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase DUF4352 PF11611.8 ORF81180 - 0.00046 20.5 0.2 0.0018 18.6 0.2 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4352) Ephrin_rec_like PF07699.13 ORF81180 - 0.085 12.6 10.6 0.085 12.6 2.4 2.8 2 0 0 2 2 2 0 Putative ephrin-receptor like Sp38 PF07354.12 ORF81180 - 3.6 7.0 14.3 0.028 13.9 2.9 2.3 2 0 0 2 2 2 0 Zona-pellucida-binding protein (Sp38) Pkinase PF00069.25 ORF143473 - 1.8e-22 79.9 7.9 2.8e-12 46.6 0.0 2.8 3 0 0 3 3 3 2 Protein kinase domain MORN PF02493.20 ORF143473 - 4.2e-18 64.1 44.2 5.9e-05 22.7 0.5 7.6 7 0 0 7 7 7 6 MORN repeat Pkinase_Tyr PF07714.17 ORF143473 - 8.5e-12 44.9 3.2 2.9e-05 23.5 0.2 3.1 3 0 0 3 3 3 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF143473 - 2e-05 24.1 0.0 0.17 11.2 0.0 2.5 2 0 0 2 2 2 2 Kinase-like APH PF01636.23 ORF143473 - 0.26 11.2 1.2 0.42 10.5 1.2 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family EF-hand_7 PF13499.6 ORF6766 - 4e-07 30.4 0.4 0.00037 20.9 0.1 3.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF6766 - 1.1e-05 24.9 0.0 0.0013 18.5 0.0 2.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF6766 - 3.8e-05 22.9 0.6 0.002 17.5 0.4 2.8 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF6766 - 0.036 13.9 0.3 0.6 10.0 0.1 2.7 3 0 0 3 3 3 0 EF-hand domain pair His_kinase PF06580.13 ORF6766 - 0.052 13.9 0.7 0.22 11.9 0.2 2.4 2 0 0 2 2 2 0 Histidine kinase CwfJ_C_1 PF04677.15 ORF6766 - 0.077 12.9 0.5 0.28 11.1 0.1 2.1 2 0 0 2 2 2 0 Protein similar to CwfJ C-terminus 1 EF-hand_5 PF13202.6 ORF6766 - 7.2 6.3 10.7 0.15 11.6 0.4 3.1 3 0 0 3 3 3 0 EF hand EF-hand_7 PF13499.6 ORF119792 - 4e-07 30.4 0.4 0.00037 20.9 0.1 3.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF119792 - 1.1e-05 24.9 0.0 0.0013 18.5 0.0 2.9 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF119792 - 3.8e-05 22.9 0.6 0.002 17.5 0.4 2.8 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 ORF119792 - 0.036 13.9 0.3 0.6 10.0 0.1 2.7 3 0 0 3 3 3 0 EF-hand domain pair His_kinase PF06580.13 ORF119792 - 0.052 13.9 0.7 0.22 11.9 0.2 2.4 2 0 0 2 2 2 0 Histidine kinase CwfJ_C_1 PF04677.15 ORF119792 - 0.077 12.9 0.5 0.28 11.1 0.1 2.1 2 0 0 2 2 2 0 Protein similar to CwfJ C-terminus 1 EF-hand_5 PF13202.6 ORF119792 - 7.2 6.3 10.7 0.15 11.6 0.4 3.1 3 0 0 3 3 3 0 EF hand Aquarius_N PF16399.5 ORF79947 - 6.3e-32 110.5 0.0 1.1e-31 109.8 0.0 1.4 1 0 0 1 1 1 1 Intron-binding protein aquarius N-terminus AAA_12 PF13087.6 ORF79947 - 5.9e-26 91.3 0.0 1.2e-25 90.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 ORF79947 - 7.4e-26 91.5 0.0 4.3e-25 89.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF79947 - 2.8e-09 37.5 0.0 4.2e-08 33.6 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF79947 - 1.5e-08 34.6 0.0 0.00026 20.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain ResIII PF04851.15 ORF79947 - 0.00043 20.3 0.0 0.00082 19.4 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit UvrD_C_2 PF13538.6 ORF79947 - 0.0025 17.6 0.1 0.0052 16.6 0.1 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_22 PF13401.6 ORF79947 - 0.0047 17.2 0.1 0.068 13.4 0.0 2.7 2 1 1 3 3 3 1 AAA domain AAA PF00004.29 ORF79947 - 0.0057 17.1 0.0 0.021 15.2 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) UvrD-helicase PF00580.21 ORF79947 - 0.071 12.6 0.0 0.13 11.8 0.0 1.6 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain AAA_16 PF13191.6 ORF79947 - 0.077 13.4 0.0 0.27 11.6 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain PhoH PF02562.16 ORF79947 - 0.089 12.2 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_5 PF07728.14 ORF79947 - 0.12 12.4 0.0 0.91 9.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DEAD PF00270.29 ORF79947 - 0.2 11.4 0.0 0.43 10.3 0.0 1.6 2 0 0 2 2 2 0 DEAD/DEAH box helicase Dimer_Tnp_hAT PF05699.14 ORF76813 - 0.01 15.6 0.0 0.026 14.3 0.0 1.6 1 0 0 1 1 1 0 hAT family C-terminal dimerisation region RNA_pol_Rpb2_6 PF00562.28 ORF120697 - 8.7e-87 291.7 0.1 1.2e-85 287.9 0.1 2.5 2 1 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 ORF120697 - 2.7e-12 46.9 0.1 7.3e-12 45.5 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 ETM PF17577.2 ORF120697 - 0.2 12.3 0.5 3.1 8.4 0.1 2.3 2 0 0 2 2 2 0 ECORI-T site Methyltransf_23 PF13489.6 ORF67762 - 0.0042 16.9 0.0 0.016 15.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF56764 - 0.0042 16.9 0.0 0.016 15.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain TonB_dep_Rec PF00593.24 ORF85684 - 8.5e-57 194.1 37.4 8.5e-57 194.1 37.4 1.6 1 1 1 2 2 2 1 TonB dependent receptor Plug PF07715.15 ORF85684 - 9.9e-29 100.1 1.3 9.9e-29 100.1 1.3 1.9 2 0 0 2 2 2 1 TonB-dependent Receptor Plug Domain Arch_flagellin PF01917.16 ORF51395 - 0.048 13.8 1.0 0.18 12.0 1.0 2.1 1 0 0 1 1 1 0 Archaebacterial flagellin Dynamin_M PF01031.20 ORF33316 - 4.3e-77 259.1 0.2 8.1e-77 258.2 0.2 1.4 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 ORF33316 - 1.4e-49 168.4 0.1 5.5e-49 166.4 0.0 2.1 2 0 0 2 2 2 1 Dynamin family GED PF02212.18 ORF33316 - 3.2e-20 72.1 2.1 4e-20 71.8 0.0 2.4 2 0 0 2 2 2 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 ORF33316 - 0.00037 20.5 0.0 0.0014 18.7 0.0 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF3194 PF11419.8 ORF33316 - 0.073 13.4 0.1 0.49 10.8 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3194) Asp-B-Hydro_N PF05279.11 ORF33316 - 7.4 6.6 9.6 0.39 10.7 2.8 2.0 2 0 0 2 2 2 0 Aspartyl beta-hydroxylase N-terminal region Cullin PF00888.22 ORF93515 - 2.7e-149 498.7 25.5 2.7e-149 498.7 25.5 1.9 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF93515 - 7.6e-23 80.3 7.0 1.4e-22 79.5 4.7 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain HTH_27 PF13463.6 ORF93515 - 0.14 12.7 0.1 2 8.9 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain Mad3_BUB1_I PF08311.12 ORF93515 - 0.91 9.5 5.8 0.21 11.6 0.4 2.8 3 0 0 3 3 3 0 Mad3/BUB1 homology region 1 AAA_2 PF07724.14 ORF90752 - 2.8e-51 174.1 0.0 1.5e-47 161.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF90752 - 5e-30 103.5 2.7 7.9e-30 102.9 1.4 2.1 2 0 0 2 2 1 1 AAA lid domain AAA PF00004.29 ORF90752 - 3.6e-24 85.7 0.1 7.7e-13 49.0 0.0 3.2 2 1 1 3 3 3 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 ORF90752 - 7e-23 80.5 0.0 2e-22 79.0 0.0 1.9 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 ORF90752 - 4.3e-19 68.9 0.0 2.9e-13 50.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) Clp_N PF02861.20 ORF90752 - 1.9e-16 59.9 1.3 8e-15 54.7 1.2 2.9 2 0 0 2 2 2 1 Clp amino terminal domain, pathogenicity island component Sigma54_activat PF00158.26 ORF90752 - 1.5e-12 47.5 0.2 5.2e-05 23.0 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_16 PF13191.6 ORF90752 - 1.1e-11 45.4 6.6 1.7e-06 28.6 0.2 4.0 4 1 0 4 4 3 2 AAA ATPase domain TniB PF05621.11 ORF90752 - 1.2e-10 41.1 0.1 1.3e-07 31.2 0.0 3.6 2 2 1 3 3 3 1 Bacterial TniB protein AAA_22 PF13401.6 ORF90752 - 3.1e-07 30.7 2.5 0.027 14.7 0.0 4.1 2 2 0 2 2 2 2 AAA domain ResIII PF04851.15 ORF90752 - 2e-06 27.9 0.0 0.049 13.6 0.0 3.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit TIP49 PF06068.13 ORF90752 - 8.7e-06 25.2 0.1 0.14 11.3 0.0 2.7 2 1 0 2 2 2 2 TIP49 P-loop domain RuvB_N PF05496.12 ORF90752 - 1.5e-05 24.8 6.0 0.14 11.9 0.3 4.6 3 2 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 ORF90752 - 1.8e-05 24.7 0.0 0.015 15.3 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 ORF90752 - 3e-05 23.6 0.0 0.22 11.0 0.0 2.7 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_18 PF13238.6 ORF90752 - 4.2e-05 24.1 0.2 0.035 14.6 0.0 3.2 3 0 0 3 3 3 1 AAA domain IstB_IS21 PF01695.17 ORF90752 - 9.8e-05 22.2 0.0 0.074 12.8 0.0 2.5 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_3 PF07726.11 ORF90752 - 0.00027 20.8 0.1 0.0038 17.1 0.1 2.7 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 ORF90752 - 0.00028 20.4 3.3 5.5 6.3 0.1 4.3 3 2 2 5 5 5 0 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 ORF90752 - 0.00042 19.9 0.1 0.43 10.1 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_6 PF12774.7 ORF90752 - 0.00044 19.3 0.0 0.0011 18.0 0.0 1.6 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_33 PF13671.6 ORF90752 - 0.0011 19.2 0.0 0.32 11.2 0.0 2.9 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 ORF90752 - 0.0018 18.3 0.1 1.2 9.2 0.1 2.5 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 ORF90752 - 0.0032 17.4 0.0 1.2 9.0 0.0 2.6 2 0 0 2 2 2 1 RsgA GTPase RNA_helicase PF00910.22 ORF90752 - 0.0052 17.1 0.0 4.5 7.7 0.0 2.7 2 0 0 2 2 2 1 RNA helicase AAA_29 PF13555.6 ORF90752 - 0.011 15.4 0.0 3.1 7.6 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain Rad17 PF03215.15 ORF90752 - 0.023 14.6 0.0 0.62 10.0 0.0 2.5 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_23 PF13476.6 ORF90752 - 0.036 14.6 2.6 2.6 8.5 0.2 3.5 2 1 1 3 3 3 0 AAA domain NACHT PF05729.12 ORF90752 - 0.036 14.0 0.1 0.28 11.1 0.0 2.4 2 0 0 2 2 2 0 NACHT domain CbiA PF01656.23 ORF90752 - 0.04 14.0 0.1 11 6.1 0.0 2.6 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DNA_pol3_delta2 PF13177.6 ORF90752 - 0.063 13.1 0.2 6.3 6.5 0.0 3.6 4 0 0 4 4 4 0 DNA polymerase III, delta subunit CHAD PF05235.14 ORF90752 - 0.069 13.1 0.1 0.18 11.8 0.0 1.8 2 0 0 2 2 1 0 CHAD domain IPT PF01745.16 ORF90752 - 0.11 11.8 0.0 0.41 10.0 0.0 1.9 2 0 0 2 2 2 0 Isopentenyl transferase ATPase_2 PF01637.18 ORF90752 - 0.4 10.6 3.4 5.3 6.9 0.1 3.3 3 1 0 3 3 3 0 ATPase domain predominantly from Archaea Cullin PF00888.22 ORF65434 - 2.7e-149 498.7 25.5 2.7e-149 498.7 25.5 1.9 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF65434 - 7.6e-23 80.3 7.0 1.4e-22 79.5 4.7 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain HTH_27 PF13463.6 ORF65434 - 0.14 12.7 0.1 2 8.9 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain Mad3_BUB1_I PF08311.12 ORF65434 - 0.91 9.5 5.8 0.21 11.6 0.4 2.8 3 0 0 3 3 3 0 Mad3/BUB1 homology region 1 Cullin PF00888.22 ORF48420 - 2.7e-149 498.7 25.5 2.7e-149 498.7 25.5 1.9 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF48420 - 7.6e-23 80.3 7.0 1.4e-22 79.5 4.7 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain HTH_27 PF13463.6 ORF48420 - 0.14 12.7 0.1 2 8.9 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain Mad3_BUB1_I PF08311.12 ORF48420 - 0.91 9.5 5.8 0.21 11.6 0.4 2.8 3 0 0 3 3 3 0 Mad3/BUB1 homology region 1 Cullin PF00888.22 ORF12931 - 2.7e-149 498.7 25.5 2.7e-149 498.7 25.5 1.9 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF12931 - 7.6e-23 80.3 7.0 1.4e-22 79.5 4.7 2.7 2 0 0 2 2 2 1 Cullin protein neddylation domain HTH_27 PF13463.6 ORF12931 - 0.14 12.7 0.1 2 8.9 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain Mad3_BUB1_I PF08311.12 ORF12931 - 0.91 9.5 5.8 0.21 11.6 0.4 2.8 3 0 0 3 3 3 0 Mad3/BUB1 homology region 1 Spore_YhaL PF14147.6 ORF98846 - 6.4 6.5 5.9 43 3.9 5.9 2.5 1 0 0 1 1 1 0 Sporulation protein YhaL Spore_YhaL PF14147.6 ORF93303 - 6.4 6.5 5.9 43 3.9 5.9 2.5 1 0 0 1 1 1 0 Sporulation protein YhaL TMF_DNA_bd PF12329.8 ORF141793 - 0.0013 18.6 8.1 0.0013 18.6 8.1 8.3 2 1 6 9 9 9 2 TATA element modulatory factor 1 DNA binding TPR_MLP1_2 PF07926.12 ORF141793 - 0.0014 18.6 63.2 0.1 12.7 11.6 5.2 3 1 1 4 4 4 3 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 ORF141793 - 0.0016 17.4 85.0 0.0076 15.2 20.1 4.6 1 1 3 4 4 4 2 Spc7 kinetochore protein DUF1664 PF07889.12 ORF141793 - 0.0088 16.1 55.6 1.1 9.3 5.6 6.0 2 1 4 6 6 6 6 Protein of unknown function (DUF1664) CC2-LZ PF16516.5 ORF141793 - 0.019 15.3 3.3 0.019 15.3 3.3 7.9 2 2 5 7 7 7 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Mcp5_PH PF12814.7 ORF141793 - 0.06 13.5 0.7 0.34 11.0 0.7 2.3 1 0 0 1 1 1 0 Meiotic cell cortex C-terminal pleckstrin homology Tropomyosin PF00261.20 ORF141793 - 0.088 12.2 79.1 0.18 11.1 14.0 4.1 1 1 3 4 4 4 0 Tropomyosin Fib_alpha PF08702.10 ORF141793 - 0.18 12.0 73.1 0.67 10.1 10.2 5.6 2 1 3 5 5 5 0 Fibrinogen alpha/beta chain family MAD PF05557.13 ORF141793 - 0.51 8.6 87.1 0.59 8.4 29.9 3.5 1 1 2 3 3 3 0 Mitotic checkpoint protein DUF948 PF06103.11 ORF141793 - 1.3 9.4 29.9 0.69 10.2 0.2 5.5 3 2 1 4 4 4 0 Bacterial protein of unknown function (DUF948) GTP_EFTU PF00009.27 ORF77233 - 3.2e-32 111.7 0.1 4.1e-31 108.0 0.1 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 ORF77233 - 5.7e-20 71.4 0.1 2.8e-19 69.2 0.1 2.3 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 ORF77233 - 4.5e-10 39.3 1.1 9.4e-10 38.3 0.1 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 ORF77233 - 2.8e-08 34.0 2.3 4.2e-07 30.3 0.1 3.1 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF77233 - 3.5e-07 30.3 0.0 1e-06 28.8 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 ORF77233 - 0.00045 20.4 0.0 0.0013 18.9 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF77233 - 0.00085 19.2 0.0 0.0029 17.4 0.0 2.0 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF77233 - 0.097 13.0 0.3 1.1 9.5 0.3 2.4 1 1 0 1 1 1 0 AAA domain Mit_KHE1 PF10173.9 ORF77233 - 0.95 9.5 5.3 1.9 8.5 5.3 1.5 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related GTP_EFTU PF00009.27 ORF56147 - 3.2e-32 111.7 0.1 4.1e-31 108.0 0.1 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 ORF56147 - 5.7e-20 71.4 0.1 2.8e-19 69.2 0.1 2.3 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 ORF56147 - 4.5e-10 39.3 1.1 9.4e-10 38.3 0.1 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 ORF56147 - 2.8e-08 34.0 2.3 4.2e-07 30.3 0.1 3.1 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF56147 - 3.5e-07 30.3 0.0 1e-06 28.8 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 ORF56147 - 0.00045 20.4 0.0 0.0013 18.9 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF56147 - 0.00085 19.2 0.0 0.0029 17.4 0.0 2.0 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF56147 - 0.097 13.0 0.3 1.1 9.5 0.3 2.4 1 1 0 1 1 1 0 AAA domain Mit_KHE1 PF10173.9 ORF56147 - 0.95 9.5 5.3 1.9 8.5 5.3 1.5 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related GTP_EFTU PF00009.27 ORF152865 - 3.2e-32 111.7 0.1 4.1e-31 108.0 0.1 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 ORF152865 - 5.7e-20 71.4 0.1 2.8e-19 69.2 0.1 2.3 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 ORF152865 - 4.5e-10 39.3 1.1 9.4e-10 38.3 0.1 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 ORF152865 - 2.8e-08 34.0 2.3 4.2e-07 30.3 0.1 3.1 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 ORF152865 - 3.5e-07 30.3 0.0 1e-06 28.8 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 ORF152865 - 0.00045 20.4 0.0 0.0013 18.9 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF152865 - 0.00085 19.2 0.0 0.0029 17.4 0.0 2.0 2 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 ORF152865 - 0.097 13.0 0.3 1.1 9.5 0.3 2.4 1 1 0 1 1 1 0 AAA domain Mit_KHE1 PF10173.9 ORF152865 - 0.95 9.5 5.3 1.9 8.5 5.3 1.5 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Alpha-mann_mid PF09261.11 ORF83980 - 1.4e-09 37.9 0.1 3.9e-09 36.6 0.1 1.7 1 0 0 1 1 1 1 Alpha mannosidase middle domain WD40 PF00400.32 ORF51091 - 7.4e-11 42.4 24.7 0.0017 19.1 0.4 8.3 7 1 1 8 8 8 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF51091 - 1.4e-09 38.1 4.6 0.00024 21.3 0.1 5.8 3 1 3 7 7 7 3 Anaphase-promoting complex subunit 4 WD40 domain Nucleoporin_N PF08801.11 ORF51091 - 0.02 13.7 0.1 0.053 12.3 0.1 1.7 1 0 0 1 1 1 0 Nup133 N terminal like PD40 PF07676.12 ORF51091 - 0.057 13.4 0.0 0.23 11.4 0.0 2.1 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat eIF2A PF08662.11 ORF51091 - 0.11 12.3 3.8 0.47 10.3 0.1 3.5 4 1 1 5 5 5 0 Eukaryotic translation initiation factor eIF2A BBS2_N PF14781.6 ORF51091 - 0.13 12.2 0.2 0.42 10.6 0.2 1.9 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal Extensin_1 PF02095.15 ORF40641 - 8.7 6.8 7.8 5.8 7.4 0.6 3.1 2 0 0 2 2 2 0 Extensin-like protein repeat WD40 PF00400.32 ORF138092 - 7.4e-11 42.4 24.7 0.0017 19.1 0.4 8.3 7 1 1 8 8 8 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF138092 - 1.4e-09 38.1 4.6 0.00024 21.3 0.1 5.8 3 1 3 7 7 7 3 Anaphase-promoting complex subunit 4 WD40 domain Nucleoporin_N PF08801.11 ORF138092 - 0.02 13.7 0.1 0.053 12.3 0.1 1.7 1 0 0 1 1 1 0 Nup133 N terminal like PD40 PF07676.12 ORF138092 - 0.057 13.4 0.0 0.23 11.4 0.0 2.1 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat eIF2A PF08662.11 ORF138092 - 0.11 12.3 3.8 0.47 10.3 0.1 3.5 4 1 1 5 5 5 0 Eukaryotic translation initiation factor eIF2A BBS2_N PF14781.6 ORF138092 - 0.13 12.2 0.2 0.42 10.6 0.2 1.9 1 0 0 1 1 1 0 Ciliary BBSome complex subunit 2, N-terminal DUF4215 PF13948.6 ORF116646 - 1.4e-30 105.5 72.0 1.5e-10 41.4 10.3 4.9 4 1 0 4 4 4 4 Domain of unknown function (DUF4215) Opiods_neuropep PF01160.18 ORF116646 - 0.019 15.1 0.8 0.019 15.1 0.8 4.3 5 0 0 5 5 5 0 Vertebrate endogenous opioids neuropeptide TMEM191C PF15194.6 ORF116646 - 0.15 12.2 0.1 17 5.6 0.0 2.6 2 0 0 2 2 2 0 TMEM191C family Claudin_2 PF13903.6 ORF116646 - 0.59 9.9 4.8 2.6 7.7 0.1 3.3 2 1 1 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction UPF0542 PF15086.6 ORF116646 - 2.5 8.1 5.7 3.6 7.6 0.1 3.2 3 0 0 3 3 3 0 Uncharacterised protein family UPF0542 DUF1981 PF09324.10 ORF43745 - 1.2e-25 89.1 12.6 1.1e-24 86.1 0.6 5.6 5 3 1 6 6 6 2 Domain of unknown function (DUF1981) Elf4 PF07011.11 ORF43745 - 0.092 12.7 1.8 0.51 10.3 0.1 3.1 2 0 0 2 2 2 0 Early Flowering 4 domain Cnd1 PF12717.7 ORF43745 - 0.46 10.5 6.5 8.2 6.4 0.2 3.8 3 1 1 4 4 4 0 non-SMC mitotic condensation complex subunit 1 TRP PF06011.12 ORF132620 - 4.6e-05 22.3 17.8 0.00011 21.1 17.7 1.7 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel TRP PF06011.12 ORF113893 - 4.6e-05 22.3 17.8 0.00011 21.1 17.7 1.7 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel Pkinase PF00069.25 ORF1887 - 6.8e-23 81.4 6.6 2.7e-12 46.6 0.0 2.8 3 0 0 3 3 3 2 Protein kinase domain MORN PF02493.20 ORF1887 - 5.3e-19 66.9 42.9 5.8e-05 22.7 0.5 7.7 7 0 0 7 7 7 6 MORN repeat Pkinase_Tyr PF07714.17 ORF1887 - 7.4e-11 41.8 6.8 2.8e-05 23.5 0.2 3.2 3 1 1 4 4 4 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF1887 - 2.3e-05 23.9 0.0 0.16 11.2 0.0 2.3 2 0 0 2 2 2 2 Kinase-like Seadorna_VP7 PF07387.11 ORF1887 - 0.01 14.9 0.4 0.018 14.1 0.4 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 APH PF01636.23 ORF1887 - 0.26 11.2 1.2 0.41 10.5 1.2 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase PF00069.25 ORF148233 - 1.2e-49 169.1 0.0 3.7e-49 167.5 0.0 1.8 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF148233 - 1e-37 129.8 0.0 2.8e-37 128.4 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase OSR1_C PF12202.8 ORF148233 - 0.015 15.5 0.3 0.082 13.1 0.3 2.3 1 0 0 1 1 1 0 Oxidative-stress-responsive kinase 1 C-terminal domain tRNA-synt_1g PF09334.11 ORF142286 - 4.8e-146 486.5 3.6 6.1e-146 486.2 3.6 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 ORF142286 - 1e-06 27.3 1.1 4.5e-05 21.9 0.0 2.6 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF142286 - 0.00019 21.4 0.2 0.0018 18.2 0.0 2.3 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA DUF2797 PF10977.8 ORF142286 - 0.049 13.5 2.8 0.091 12.6 2.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) MS_channel PF00924.18 ORF126460 - 2.4e-44 151.3 1.8 4.8e-44 150.4 1.8 1.5 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF2569 PF10754.9 ORF126460 - 3.8 7.9 26.5 1.4 9.3 6.0 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2569) DUF229 PF02995.17 ORF37312 - 2.6e-28 98.9 4.3 2.6e-18 65.9 0.4 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF37312 - 1.7e-05 24.4 0.1 2.5e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 Sulfatase BRO1 PF03097.18 ORF129669 - 7e-53 179.8 4.9 1.5e-52 178.8 4.9 1.5 1 0 0 1 1 1 1 BRO1-like domain ALIX_LYPXL_bnd PF13949.6 ORF129669 - 2.1e-49 168.4 5.4 2.1e-49 168.4 5.4 1.9 2 0 0 2 2 2 1 ALIX V-shaped domain binding to HIV baeRF_family3 PF18845.1 ORF129669 - 0.1 12.8 0.3 0.89 9.8 0.1 2.2 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 3 tRNA-synt_1b PF00579.25 ORF70604 - 0.027 13.8 2.0 0.053 12.8 0.2 2.4 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) DnaB PF00772.21 ORF70604 - 0.07 13.2 1.6 0.26 11.4 0.2 2.6 2 0 0 2 2 2 0 DnaB-like helicase N terminal domain tRNA-synt_1b PF00579.25 ORF37045 - 0.027 13.8 2.0 0.053 12.8 0.2 2.4 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) DnaB PF00772.21 ORF37045 - 0.07 13.2 1.6 0.26 11.4 0.2 2.6 2 0 0 2 2 2 0 DnaB-like helicase N terminal domain PDEase_I PF00233.19 ORF113170 - 7.3e-76 255.0 2.7 7.3e-76 255.0 2.7 1.8 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase DUF2070 PF09843.9 ORF113170 - 0.091 11.0 2.3 0.13 10.5 2.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) 5TM-5TMR_LYT PF07694.12 ORF113170 - 0.21 11.1 3.4 0.58 9.6 3.4 1.7 1 0 0 1 1 1 0 5TMR of 5TMR-LYT Spore_YabQ PF09578.10 ORF113170 - 3.2 8.0 9.6 1.3 9.3 6.6 2.0 2 0 0 2 2 2 0 Spore cortex protein YabQ (Spore_YabQ) Abhydrolase_3 PF07859.13 ORF74588 - 3.6e-46 157.7 0.0 5.1e-46 157.2 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold HSL_N PF06350.12 ORF74588 - 0.00018 20.6 0.4 0.00036 19.6 0.4 1.4 1 0 0 1 1 1 1 Hormone-sensitive lipase (HSL) N-terminus FGGY_C PF02782.16 ORF74588 - 0.1 12.3 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain ZU5 PF00791.20 ORF55003 - 0.046 14.1 0.0 0.18 12.2 0.0 2.0 2 0 0 2 2 2 0 ZU5 domain HSP90 PF00183.18 ORF45682 - 4.3e-100 336.1 9.0 2.5e-98 330.2 4.9 2.1 1 1 1 2 2 2 2 Hsp90 protein HATPase_c_3 PF13589.6 ORF45682 - 3.1e-10 40.0 0.9 5.4e-10 39.2 0.1 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 ORF45682 - 6.7e-10 39.5 0.7 6.9e-09 36.2 0.2 2.5 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DinB PF05163.12 ORF45682 - 0.032 14.2 0.5 0.69 9.8 0.0 2.4 2 0 0 2 2 2 0 DinB family Pyr_redox_2 PF07992.14 ORF13447 - 1.6e-46 158.9 0.0 2.1e-46 158.5 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_20 PF14691.6 ORF13447 - 7e-17 61.2 18.9 4.1e-16 58.8 0.5 3.2 2 2 2 4 4 4 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_3 PF13738.6 ORF13447 - 5e-13 49.0 0.1 6.4e-08 32.2 0.0 2.2 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 ORF13447 - 7.4e-09 35.7 1.1 4.7e-08 33.1 0.1 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 ORF13447 - 1.4e-08 35.1 0.2 0.01 16.4 0.0 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF13447 - 2.7e-06 26.8 0.2 0.00031 20.1 0.0 2.3 2 0 0 2 2 2 1 Thi4 family DAO PF01266.24 ORF13447 - 2.1e-05 24.3 0.3 2.1e-05 24.3 0.3 2.4 2 1 1 3 3 3 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 ORF13447 - 5.7e-05 22.5 1.2 5.9e-05 22.5 0.2 1.5 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 ORF13447 - 7e-05 22.1 0.6 7e-05 22.1 0.6 2.1 2 0 0 2 2 2 1 FAD binding domain GIDA PF01134.22 ORF13447 - 0.00029 20.1 0.1 0.00029 20.1 0.1 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 ORF13447 - 0.0011 18.4 0.6 0.0011 18.4 0.6 2.0 3 0 0 3 3 3 1 FAD dependent oxidoreductase HI0933_like PF03486.14 ORF13447 - 0.0012 17.7 0.3 0.0012 17.7 0.3 1.9 2 0 0 2 2 2 1 HI0933-like protein Fer4_9 PF13187.6 ORF13447 - 0.0016 18.6 10.9 0.0016 18.6 10.9 3.3 2 2 2 4 4 3 1 4Fe-4S dicluster domain ApbA PF02558.16 ORF13447 - 0.0046 16.6 0.0 0.011 15.4 0.0 1.7 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA PALP PF00291.25 ORF13447 - 0.0065 15.9 0.0 0.2 11.0 0.0 2.2 2 0 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme Fer4_10 PF13237.6 ORF13447 - 0.01 15.9 2.4 0.01 15.9 2.4 3.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Rossmann-like PF10727.9 ORF13447 - 0.017 15.0 0.3 0.29 11.0 0.1 2.3 2 0 0 2 2 2 0 Rossmann-like domain Fer4_7 PF12838.7 ORF13447 - 0.017 15.7 13.3 0.017 15.7 13.3 3.5 3 1 0 3 3 3 0 4Fe-4S dicluster domain Amino_oxidase PF01593.24 ORF13447 - 0.024 13.9 0.1 0.04 13.2 0.1 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase 3HCDH_N PF02737.18 ORF13447 - 0.026 14.4 0.4 0.062 13.2 0.1 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K_oxygenase PF13434.6 ORF13447 - 0.039 13.1 0.0 0.15 11.1 0.0 1.8 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_7 PF13241.6 ORF13447 - 0.043 14.3 0.0 8.8 6.8 0.0 2.5 2 0 0 2 2 2 0 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 ORF13447 - 0.09 12.8 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Shikimate_DH PF01488.20 ORF13447 - 0.15 12.1 0.0 2.1 8.4 0.0 2.4 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase FMO-like PF00743.19 ORF13447 - 0.17 10.3 0.0 5.2 5.4 0.0 2.0 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like Fer4_16 PF13484.6 ORF13447 - 0.19 12.7 19.9 0.16 12.9 0.6 3.7 3 1 2 5 5 2 0 4Fe-4S double cluster binding domain AlaDh_PNT_C PF01262.21 ORF13447 - 0.27 10.5 0.7 2.5 7.3 0.1 2.1 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Fer4_21 PF14697.6 ORF13447 - 1.3 9.2 14.5 0.091 12.9 8.8 2.1 2 0 0 2 2 1 0 4Fe-4S dicluster domain Fer4 PF00037.27 ORF13447 - 1.4 8.9 22.6 0.069 13.0 3.3 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 ORF13447 - 9.9 6.5 33.3 0.066 13.3 1.6 4.0 4 0 0 4 4 3 0 4Fe-4S binding domain Kinesin PF00225.23 ORF47533 - 5.1e-90 301.8 6.5 5.1e-90 301.8 6.5 2.3 3 0 0 3 3 3 1 Kinesin motor domain Microtub_bd PF16796.5 ORF47533 - 2e-21 76.5 0.5 2e-21 76.5 0.5 3.8 2 1 1 3 3 3 1 Microtubule binding APC_N_CC PF16689.5 ORF47533 - 0.12 12.4 2.9 0.14 12.2 0.7 2.3 2 0 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain DUF4806 PF16064.5 ORF47533 - 6.1 7.2 11.7 3.1 8.2 1.4 3.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4806) DUF229 PF02995.17 ORF20158 - 1.1e-24 86.9 15.1 1.6e-23 83.2 15.1 2.4 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF20158 - 6.1e-11 42.3 2.9 8e-10 38.6 2.9 2.6 2 1 0 2 2 2 1 Sulfatase MFS_1 PF07690.16 ORF20158 - 0.47 9.3 8.5 0.69 8.8 8.5 1.1 1 0 0 1 1 1 0 Major Facilitator Superfamily DUF3792 PF12670.7 ORF20158 - 0.68 10.1 8.8 1.2 9.3 8.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3792) MARVEL PF01284.23 ORF20158 - 2.4 8.2 8.8 4.9 7.2 8.8 1.5 1 0 0 1 1 1 0 Membrane-associating domain Hydrolase_4 PF12146.8 ORF97074 - 5.2e-07 29.2 0.0 9.3e-07 28.3 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF97074 - 0.00067 19.4 0.1 0.0013 18.5 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF818 PF05677.12 ORF97074 - 0.0014 17.7 0.0 0.0028 16.7 0.0 1.5 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Abhydrolase_6 PF12697.7 ORF97074 - 0.0075 16.9 0.0 0.011 16.3 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family SAS4 PF15460.6 ORF97074 - 0.093 12.8 4.2 1.2 9.2 0.5 2.7 2 0 0 2 2 2 0 Something about silencing, SAS, complex subunit 4 DUF3291 PF11695.8 ORF97074 - 0.15 11.8 0.1 4.1 7.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3291) Kelch_5 PF13854.6 ORF96539 - 2.9e-23 81.4 2.3 2.3e-05 24.3 0.0 5.7 5 0 0 5 5 5 5 Kelch motif Metallophos PF00149.28 ORF96539 - 2.5e-20 73.9 0.2 6.1e-20 72.6 0.2 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Kelch_3 PF13415.6 ORF96539 - 6.7e-20 70.9 17.3 1e-07 32.1 0.1 5.9 7 0 0 7 7 7 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF96539 - 3.8e-11 42.8 6.8 0.00063 19.9 0.0 6.2 5 1 1 6 6 6 2 Kelch motif Kelch_4 PF13418.6 ORF96539 - 5.1e-11 42.4 15.7 0.0034 17.4 0.2 6.1 6 1 1 7 7 7 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF96539 - 2.2e-09 36.8 6.3 0.00058 19.4 0.0 5.2 7 1 0 7 7 7 2 Kelch motif Kelch_2 PF07646.15 ORF96539 - 3.5e-05 23.6 2.5 4.8 7.3 0.0 5.7 6 0 0 6 6 6 2 Kelch motif Hydrolase_4 PF12146.8 ORF88285 - 5.2e-07 29.2 0.0 9.3e-07 28.3 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF88285 - 0.00067 19.4 0.1 0.0013 18.5 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF818 PF05677.12 ORF88285 - 0.0014 17.7 0.0 0.0028 16.7 0.0 1.5 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Abhydrolase_6 PF12697.7 ORF88285 - 0.0075 16.9 0.0 0.011 16.3 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family SAS4 PF15460.6 ORF88285 - 0.093 12.8 4.2 1.2 9.2 0.5 2.7 2 0 0 2 2 2 0 Something about silencing, SAS, complex subunit 4 DUF3291 PF11695.8 ORF88285 - 0.15 11.8 0.1 4.1 7.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3291) OpuAC PF04069.12 ORF88010 - 0.0054 16.4 0.0 0.0091 15.6 0.0 1.3 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system ThiW PF09512.10 ORF88010 - 0.063 13.4 0.2 0.13 12.3 0.2 1.5 1 0 0 1 1 1 0 Thiamine-precursor transporter protein (ThiW) DUF2555 PF10742.9 ORF88010 - 0.45 10.4 2.1 2.6 7.9 0.0 3.2 5 0 0 5 5 5 0 Protein of unknown function (DUF2555) Kelch_5 PF13854.6 ORF79400 - 2.9e-23 81.4 2.3 2.3e-05 24.3 0.0 5.7 5 0 0 5 5 5 5 Kelch motif Metallophos PF00149.28 ORF79400 - 2.5e-20 73.9 0.2 6.1e-20 72.6 0.2 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Kelch_3 PF13415.6 ORF79400 - 6.7e-20 70.9 17.3 1e-07 32.1 0.1 5.9 7 0 0 7 7 7 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF79400 - 3.8e-11 42.8 6.8 0.00063 19.9 0.0 6.2 5 1 1 6 6 6 2 Kelch motif Kelch_4 PF13418.6 ORF79400 - 5.1e-11 42.4 15.7 0.0034 17.4 0.2 6.1 6 1 1 7 7 7 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF79400 - 2.2e-09 36.8 6.3 0.00058 19.4 0.0 5.2 7 1 0 7 7 7 2 Kelch motif Kelch_2 PF07646.15 ORF79400 - 3.5e-05 23.6 2.5 4.8 7.3 0.0 5.7 6 0 0 6 6 6 2 Kelch motif Kelch_5 PF13854.6 ORF41613 - 2.9e-23 81.4 2.3 2.3e-05 24.3 0.0 5.7 5 0 0 5 5 5 5 Kelch motif Metallophos PF00149.28 ORF41613 - 2.5e-20 73.9 0.2 6.1e-20 72.6 0.2 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Kelch_3 PF13415.6 ORF41613 - 6.7e-20 70.9 17.3 1e-07 32.1 0.1 5.9 7 0 0 7 7 7 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF41613 - 3.8e-11 42.8 6.8 0.00063 19.9 0.0 6.2 5 1 1 6 6 6 2 Kelch motif Kelch_4 PF13418.6 ORF41613 - 5.1e-11 42.4 15.7 0.0034 17.4 0.2 6.1 6 1 1 7 7 7 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF41613 - 2.2e-09 36.8 6.3 0.00058 19.4 0.0 5.2 7 1 0 7 7 7 2 Kelch motif Kelch_2 PF07646.15 ORF41613 - 3.5e-05 23.6 2.5 4.8 7.3 0.0 5.7 6 0 0 6 6 6 2 Kelch motif Dynamin_M PF01031.20 ORF28990 - 3.1e-79 266.2 0.0 4.7e-79 265.6 0.0 1.3 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 ORF28990 - 3.6e-47 160.6 0.1 1.1e-46 159.0 0.0 1.9 2 0 0 2 2 2 1 Dynamin family GED PF02212.18 ORF28990 - 5.1e-23 81.1 0.2 1.5e-22 79.5 0.2 1.9 1 0 0 1 1 1 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 ORF28990 - 3.3e-05 23.9 0.1 0.00016 21.7 0.0 2.2 2 1 0 2 2 2 1 50S ribosome-binding GTPase Taeniidae_ag PF05596.11 ORF28990 - 0.034 14.1 0.1 0.13 12.3 0.1 2.0 1 0 0 1 1 1 0 Taeniidae antigen Na_trans_assoc PF06512.13 ORF28990 - 0.069 13.4 0.2 0.13 12.6 0.2 1.3 1 0 0 1 1 1 0 Sodium ion transport-associated Hydrolase_4 PF12146.8 ORF15914 - 5.1e-07 29.2 0.0 9.3e-07 28.3 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF15914 - 0.00065 19.4 0.1 0.0013 18.5 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF818 PF05677.12 ORF15914 - 0.0014 17.7 0.0 0.0028 16.7 0.0 1.5 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Abhydrolase_6 PF12697.7 ORF15914 - 0.0075 16.9 0.0 0.011 16.3 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF3291 PF11695.8 ORF15914 - 0.02 14.6 0.1 4.1 7.1 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3291) SAS4 PF15460.6 ORF15914 - 0.092 12.8 4.2 1.2 9.2 0.5 2.7 2 0 0 2 2 2 0 Something about silencing, SAS, complex subunit 4 Kelch_5 PF13854.6 ORF132183 - 2.9e-23 81.4 2.3 2.3e-05 24.3 0.0 5.7 5 0 0 5 5 5 5 Kelch motif Metallophos PF00149.28 ORF132183 - 2.5e-20 73.9 0.2 6.1e-20 72.6 0.2 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Kelch_3 PF13415.6 ORF132183 - 6.6e-20 70.9 17.3 1e-07 32.1 0.1 5.9 7 0 0 7 7 7 4 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF132183 - 3.8e-11 42.8 6.8 0.00063 19.9 0.0 6.2 5 1 1 6 6 6 2 Kelch motif Kelch_4 PF13418.6 ORF132183 - 5.1e-11 42.4 15.7 0.0034 17.4 0.2 6.1 6 1 1 7 7 7 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF132183 - 2.2e-09 36.8 6.3 0.00058 19.4 0.0 5.2 7 1 0 7 7 7 2 Kelch motif Kelch_2 PF07646.15 ORF132183 - 3.5e-05 23.6 2.5 4.8 7.3 0.0 5.7 6 0 0 6 6 6 2 Kelch motif Dynamin_M PF01031.20 ORF123264 - 3.1e-79 266.2 0.0 4.7e-79 265.6 0.0 1.3 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 ORF123264 - 3.6e-47 160.6 0.1 1.1e-46 159.0 0.0 1.9 2 0 0 2 2 2 1 Dynamin family GED PF02212.18 ORF123264 - 5.1e-23 81.1 0.2 1.5e-22 79.5 0.2 1.9 1 0 0 1 1 1 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 ORF123264 - 3.3e-05 23.9 0.1 0.00016 21.7 0.0 2.2 2 1 0 2 2 2 1 50S ribosome-binding GTPase Taeniidae_ag PF05596.11 ORF123264 - 0.034 14.1 0.1 0.13 12.3 0.1 2.0 1 0 0 1 1 1 0 Taeniidae antigen Na_trans_assoc PF06512.13 ORF123264 - 0.069 13.4 0.2 0.13 12.6 0.2 1.3 1 0 0 1 1 1 0 Sodium ion transport-associated Methyltransf_3 PF01596.17 ORF119916 - 1e-10 41.2 0.0 2.3e-10 40.0 0.0 1.5 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 ORF119916 - 4.4e-08 34.1 0.5 1.1e-07 32.9 0.5 1.7 1 0 0 1 1 1 1 Methyltransferase domain TPR_14 PF13428.6 ORF119916 - 0.077 13.9 0.2 8.6 7.5 0.2 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat CmcI PF04989.12 ORF119916 - 0.098 12.3 0.1 0.18 11.5 0.1 1.3 1 0 0 1 1 1 0 Cephalosporin hydroxylase PPR PF01535.20 ORF119916 - 0.16 12.3 0.1 7.3 7.1 0.2 3.3 2 0 0 2 2 2 0 PPR repeat DUF229 PF02995.17 ORF109271 - 1.1e-24 87.0 15.1 1.5e-23 83.2 15.1 2.5 1 1 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF109271 - 2.8e-10 40.1 4.8 7.7e-10 38.7 2.8 2.5 2 1 0 2 2 2 1 Sulfatase TatC PF00902.18 ORF109271 - 1.7 8.4 8.3 3 7.6 8.3 1.3 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) Piwi PF02171.17 ORF47036 - 1.1e-58 198.9 0.1 1.6e-58 198.3 0.1 1.3 1 0 0 1 1 1 1 Piwi domain PAZ PF02170.22 ORF47036 - 5e-21 74.9 1.1 5e-21 74.9 1.1 2.2 1 1 1 2 2 2 1 PAZ domain DUF2067 PF09840.9 ORF47036 - 0.051 13.1 0.0 0.26 10.8 0.0 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2067) ArgoMid PF16487.5 ORF47036 - 0.25 11.6 1.6 0.63 10.3 0.0 2.6 3 0 0 3 3 3 0 Mid domain of argonaute HEAT_EZ PF13513.6 ORF4560 - 1.5e-11 44.5 15.5 0.045 14.3 0.1 7.8 7 0 0 7 7 7 3 HEAT-like repeat HEAT PF02985.22 ORF4560 - 1e-10 40.9 15.8 0.059 13.6 0.0 8.8 9 0 0 9 9 9 4 HEAT repeat HEAT_2 PF13646.6 ORF4560 - 9.1e-05 22.8 13.9 0.0061 16.9 0.2 5.8 4 2 2 6 6 6 2 HEAT repeats HEAT_PBS PF03130.16 ORF4560 - 0.0086 16.7 3.1 0.81 10.5 0.0 4.3 4 0 0 4 4 4 1 PBS lyase HEAT-like repeat Adaptin_N PF01602.20 ORF4560 - 0.028 13.0 0.3 0.35 9.4 0.0 2.7 3 1 0 3 3 3 0 Adaptin N terminal region Vac14_Fab1_bd PF12755.7 ORF4560 - 0.032 14.8 0.2 3.4 8.3 0.0 3.2 3 1 0 4 4 4 0 Vacuolar 14 Fab1-binding region GRA6 PF05084.13 ORF4560 - 0.069 13.1 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Granule antigen protein (GRA6) Arm PF00514.23 ORF4560 - 1.7 8.8 6.6 42 4.4 0.1 5.0 5 0 0 5 5 5 0 Armadillo/beta-catenin-like repeat Dynein_C PF18199.1 ORF20423 - 9.5e-109 363.3 0.0 1.5e-108 362.7 0.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_lid_11 PF18198.1 ORF20423 - 1.2e-65 220.3 0.0 2.4e-65 219.3 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 ORF20423 - 4.3e-46 155.9 0.0 8.2e-46 155.0 0.0 1.5 1 0 0 1 1 1 1 Dynein heavy chain region D6 P-loop domain PEPcase PF00311.17 ORF116419 - 8.3e-282 937.0 0.0 9.5e-282 936.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase PEPcase_2 PF14010.6 ORF116419 - 8.5e-05 21.2 0.0 0.00012 20.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase CBM_20 PF00686.19 ORF91452 - 7e-12 45.1 1.6 1.7e-11 43.9 0.1 2.5 2 0 0 2 2 2 1 Starch binding domain Vps16_C PF04840.12 ORF64382 - 1.2e-33 116.5 1.1 3.3e-33 115.1 1.1 1.7 1 1 0 1 1 1 1 Vps16, C-terminal region Vps16_N PF04841.13 ORF64382 - 1.2e-31 109.9 0.0 1.9e-31 109.3 0.0 1.2 1 0 0 1 1 1 1 Vps16, N-terminal region CARD PF00619.21 ORF64382 - 0.017 15.2 0.0 0.82 9.7 0.1 3.1 2 0 0 2 2 2 0 Caspase recruitment domain DUF1897 PF09005.10 ORF64382 - 3.9 7.0 9.0 3.1 7.4 3.7 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF1897) E1-E2_ATPase PF00122.20 ORF136246 - 1.9e-48 164.4 0.7 2e-47 161.1 0.0 2.8 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 ORF136246 - 1.9e-35 123.1 8.1 3.8e-35 122.1 8.1 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 ORF136246 - 2.7e-12 46.9 0.3 5.8e-12 45.9 0.3 1.5 1 0 0 1 1 1 1 Heavy-metal-associated domain Hydrolase_3 PF08282.12 ORF136246 - 3.7e-07 30.1 1.6 1.2e-05 25.2 1.0 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase FeS_assembly_P PF01883.19 ORF136246 - 1.7 8.9 6.0 8.8 6.6 0.0 3.4 3 0 0 3 3 3 0 Iron-sulfur cluster assembly protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks7.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks7.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks7.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks7.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SlyX PF04102.12 ORF133337 - 1.4e-08 35.3 0.8 2.3e-08 34.5 0.8 1.4 1 0 0 1 1 1 1 SlyX DUF4407 PF14362.6 ORF133337 - 3.3 7.0 10.8 5 6.4 10.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Fer4 PF00037.27 ORF131856 - 4.3e-11 42.1 36.0 1.4e-06 27.9 1.3 5.4 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_7 PF12838.7 ORF131856 - 1e-10 42.0 25.4 0.00026 21.5 7.9 3.6 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF131856 - 1.1e-09 38.0 31.9 0.0024 17.9 1.1 4.9 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 ORF131856 - 3.7e-08 33.4 29.6 1.7e-05 24.9 9.1 3.7 3 1 0 4 4 4 3 4Fe-4S dicluster domain Fer4_11 PF13247.6 ORF131856 - 7.4e-08 32.4 10.8 2.8e-07 30.6 4.3 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF131856 - 3.3e-07 31.2 26.1 0.0091 16.9 0.8 4.4 4 1 0 4 4 4 3 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 ORF131856 - 6.9e-06 26.1 28.6 0.088 12.9 8.8 4.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_21 PF14697.6 ORF131856 - 0.00016 21.7 31.1 0.013 15.6 12.3 4.0 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 ORF131856 - 0.0013 18.7 32.4 0.046 13.8 2.2 4.8 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_8 PF13183.6 ORF131856 - 0.0036 17.7 10.5 0.0036 17.7 10.5 3.4 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF131856 - 0.014 16.3 50.0 0.051 14.5 2.6 4.8 5 0 0 5 5 4 0 4Fe-4S binding domain Fer4_4 PF12800.7 ORF131856 - 0.041 14.4 1.5 0.041 14.4 1.5 5.1 5 1 0 5 5 4 0 4Fe-4S binding domain Fer4_5 PF12801.7 ORF131856 - 0.081 12.9 2.8 4.3 7.4 0.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 ORF131856 - 0.085 13.4 20.6 0.43 11.2 7.9 3.7 3 1 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 ORF131856 - 0.13 12.4 12.8 0.074 13.2 2.8 3.0 2 1 1 3 3 3 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_17 PF13534.6 ORF131856 - 1.3 9.7 33.5 0.73 10.4 2.0 4.1 3 1 2 5 5 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 ORF131856 - 3.4 8.5 21.2 0.11 13.2 5.0 4.0 4 1 0 4 4 3 0 4Fe-4S single cluster domain JAB PF01398.21 ORF128862 - 2e-25 89.1 0.2 2e-25 89.1 0.2 2.0 2 1 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 ORF128862 - 2.4e-08 34.3 1.1 3.8e-08 33.7 1.1 1.3 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function Prok-JAB PF14464.6 ORF128862 - 6.3e-05 22.7 0.0 0.00017 21.4 0.0 1.7 2 0 0 2 2 2 1 Prokaryotic homologs of the JAB domain GerD PF17898.1 ORF128862 - 0.023 14.6 3.2 5 7.1 2.3 2.3 2 0 0 2 2 2 0 Spore germination GerD central core domain DNApol_Exo PF18136.1 ORF128862 - 0.035 13.2 1.1 0.05 12.7 1.1 1.1 1 0 0 1 1 1 0 DNA mitochondrial polymerase exonuclease domain Swi3 PF07962.12 ORF128862 - 0.11 12.5 0.5 0.17 11.9 0.5 1.4 1 0 0 1 1 1 0 Replication Fork Protection Component Swi3 NUDIX PF00293.28 ORF124036 - 5.4e-12 45.9 0.0 8.4e-12 45.3 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain GSIII_N PF12437.8 ORF124036 - 0.11 12.1 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 Glutamine synthetase type III N terminal DUF1641 PF07849.11 ORF12361 - 0.03 14.2 0.2 0.059 13.3 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1641) Peptidase_M35 PF02102.15 ORF12361 - 0.032 13.1 0.2 0.048 12.5 0.2 1.3 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family HECT PF00632.25 ORF117820 - 0.093 12.2 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 HECT-domain (ubiquitin-transferase) SSP160 PF06933.11 ORF117701 - 0.85 7.7 3.0 1.1 7.4 3.0 1.0 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Pkinase PF00069.25 ORF116879 - 1e-51 175.8 0.0 1.2e-51 175.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF116879 - 2.1e-18 66.5 0.0 3.7e-18 65.7 0.0 1.3 2 0 0 2 2 2 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF116879 - 1.4e-05 24.3 0.0 2.1e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF116879 - 0.032 13.0 0.1 0.077 11.8 0.1 1.4 1 1 1 2 2 2 0 Fungal protein kinase Lyase_8_N PF08124.11 ORF116879 - 0.061 12.2 0.0 0.089 11.7 0.0 1.1 1 0 0 1 1 1 0 Polysaccharide lyase family 8, N terminal alpha-helical domain Kdo PF06293.14 ORF116879 - 0.071 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF116879 - 0.1 12.5 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family YqzE PF14038.6 ORF116625 - 0.0043 17.0 1.0 0.011 15.7 1.0 1.6 1 0 0 1 1 1 1 YqzE-like protein adh_short_C2 PF13561.6 ORF114010 - 2.7e-52 177.6 1.4 3.7e-52 177.2 1.4 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF114010 - 2.5e-46 157.6 3.0 5.5e-46 156.5 3.0 1.5 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF114010 - 2.3e-10 40.7 5.1 4.8e-09 36.4 5.1 2.2 1 1 0 1 1 1 1 KR domain DFP PF04127.15 ORF114010 - 0.0014 18.5 0.8 0.0023 17.8 0.8 1.4 1 1 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein Epimerase PF01370.21 ORF114010 - 0.0019 17.7 0.1 0.011 15.2 0.1 1.9 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 2-Hacid_dh_C PF02826.19 ORF114010 - 0.022 14.1 0.0 0.036 13.4 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 ORF114010 - 0.022 15.2 0.0 0.062 13.7 0.1 1.8 2 1 0 2 2 2 0 Putative NAD(P)-binding THF_DHG_CYH_C PF02882.19 ORF114010 - 0.024 14.0 0.0 0.31 10.4 0.0 2.5 2 1 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Cyclin_N PF00134.23 ORF103141 - 2.4e-09 37.0 0.3 4.5e-09 36.1 0.3 1.5 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 ORF103141 - 2.7e-09 37.6 0.1 3.9e-09 37.1 0.1 1.3 1 1 0 1 1 1 1 Cyclin DUF3161 PF11362.8 ORF103141 - 0.074 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3161) Ribosomal_S8e PF01201.22 ORF102415 - 4.3e-46 156.5 5.4 4.3e-46 156.5 5.4 1.9 1 1 1 2 2 2 1 Ribosomal protein S8e RHINO PF15319.6 ORF100488 - 0.0091 16.1 1.6 0.013 15.6 1.6 1.1 1 0 0 1 1 1 1 RAD9, RAD1, HUS1-interacting nuclear orphan protein TpcC PF12642.7 ORF100488 - 0.1 12.4 4.2 0.17 11.6 4.1 1.3 1 1 0 1 1 1 0 Conjugative transposon protein TcpC PX PF00787.24 NODE_27878_length_772_cov_2.496608_g21905_i0forward_frame_1 - 0.038 14.0 0.1 0.088 12.8 0.1 1.6 1 0 0 1 1 1 0 PX domain HD_3 PF13023.6 NODE_27878_length_772_cov_2.496608_g21905_i0forward_frame_1 - 0.085 12.8 0.7 0.14 12.1 0.7 1.4 1 0 0 1 1 1 0 HD domain Synthase_beta PF11421.8 NODE_27827_length_773_cov_88.117886_g21858_i0forward_frame_1 - 0.057 14.1 3.0 0.057 14.1 3.0 2.4 2 0 0 2 2 2 0 ATP synthase F1 beta subunit Alkyl_sulf_dimr PF14863.6 NODE_27784_length_774_cov_4.098782_g21825_i0reverse_frame_1 - 2.4e-55 186.8 1.0 3.3e-55 186.3 1.0 1.2 1 0 0 1 1 1 1 Alkyl sulfatase dimerisation Alkyl_sulf_C PF14864.6 NODE_27784_length_774_cov_4.098782_g21825_i0reverse_frame_1 - 9e-21 74.5 0.1 1.4e-20 73.9 0.1 1.3 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal TPR_16 PF13432.6 NODE_27784_length_774_cov_4.098782_g21825_i0reverse_frame_1 - 0.12 13.0 0.6 0.27 11.9 0.3 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat Peptidase_C97 PF05903.14 NODE_27762_length_774_cov_215.211096_g21806_i0forward_frame_1 - 0.00012 22.0 0.7 0.00026 20.9 0.6 1.5 1 1 0 1 1 1 1 PPPDE putative peptidase domain LRAT PF04970.13 NODE_27762_length_774_cov_215.211096_g21806_i0forward_frame_1 - 0.017 15.4 1.2 0.017 15.4 1.2 1.8 1 1 1 2 2 2 0 Lecithin retinol acyltransferase Intron_maturas2 PF01348.21 NODE_27762_length_774_cov_215.211096_g21806_i0forward_frame_1 - 0.1 12.6 0.2 0.17 11.8 0.2 1.3 1 0 0 1 1 1 0 Type II intron maturase Pentapeptide_2 PF01469.18 NODE_27762_length_774_cov_215.211096_g21806_i0forward_frame_1 - 2.3 8.2 26.5 0.54 10.2 11.7 2.4 1 1 1 2 2 2 0 Pentapeptide repeats (8 copies) Methyltransf_29 PF03141.16 NODE_27736_length_775_cov_76.890541_g21781_i0forward_frame_2 - 0.15 10.6 0.1 0.2 10.2 0.1 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase PARP PF00644.20 NODE_27720_length_775_cov_159.667568_g21765_i0forward_frame_2 - 8e-25 87.6 2.8 9.4e-21 74.3 0.0 2.5 2 1 1 3 3 3 2 Poly(ADP-ribose) polymerase catalytic domain Tox-ART-HYD1 PF15633.6 NODE_27720_length_775_cov_159.667568_g21765_i0forward_frame_2 - 0.17 12.5 0.0 0.33 11.6 0.0 1.4 1 0 0 1 1 1 0 HYD1 signature containing ADP-ribosyltransferase PCMT PF01135.19 NODE_27694_length_776_cov_61.489879_g21742_i0forward_frame_2 - 0.00013 21.8 0.0 0.00014 21.6 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 NODE_27694_length_776_cov_61.489879_g21742_i0forward_frame_2 - 0.00092 19.1 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 NODE_27694_length_776_cov_61.489879_g21742_i0forward_frame_2 - 0.0031 18.2 0.1 0.0074 17.0 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 NODE_27694_length_776_cov_61.489879_g21742_i0forward_frame_2 - 0.068 12.6 0.1 0.092 12.1 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) PLAC8 PF04749.17 NODE_27680_length_776_cov_210.622132_g21731_i0forward_frame_3 - 0.76 10.8 4.3 0.4 11.7 1.2 2.0 2 0 0 2 2 2 0 PLAC8 family GRIM-19 PF06212.12 NODE_27666_length_777_cov_44.257412_g21724_i0reverse_frame_2 - 3.3 7.7 5.1 1.3 8.9 0.2 2.5 3 0 0 3 3 3 0 GRIM-19 protein DUF3671 PF12420.8 NODE_27666_length_777_cov_44.257412_g21724_i0forward_frame_2 - 2.5 8.2 6.9 7.6 6.6 1.2 2.6 2 1 0 3 3 3 0 Protein of unknown function fn3 PF00041.21 NODE_27652_length_777_cov_106.597035_g21710_i0forward_frame_2 - 3.9e-06 27.1 4.1 0.019 15.3 0.1 3.5 3 1 0 3 3 3 2 Fibronectin type III domain Phage-tail_1 PF09097.10 NODE_27652_length_777_cov_106.597035_g21710_i0forward_frame_2 - 0.08 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Baseplate structural protein, domain 1 DUF2862 PF11061.8 NODE_27633_length_777_cov_295.742588_g21694_i0reverse_frame_3 - 0.16 11.9 0.1 0.31 10.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2862) DUF1298 PF06974.13 ORF99304 - 0.00052 20.0 0.0 0.00084 19.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) SBP_bac_6 PF13343.6 ORF99304 - 0.1 12.0 0.0 2 7.8 0.0 2.4 3 0 0 3 3 3 0 Bacterial extracellular solute-binding protein DHHC PF01529.20 ORF9538 - 7.8e-32 110.2 13.7 7.8e-32 110.2 13.7 2.2 2 1 0 2 2 2 1 DHHC palmitoyltransferase AA_permease_2 PF13520.6 ORF9538 - 0.13 11.0 9.0 0.18 10.6 1.2 2.3 2 1 0 2 2 2 0 Amino acid permease 7TMR-DISM_7TM PF07695.11 ORF9538 - 0.33 10.8 19.3 1.3 8.8 3.0 2.5 2 1 0 2 2 2 0 7TM diverse intracellular signalling IGFBP PF00219.18 ORF9538 - 0.5 11.1 6.2 0.89 10.2 6.2 1.3 1 0 0 1 1 1 0 Insulin-like growth factor binding protein Ferlin_C PF16165.5 ORF9538 - 5.5 6.9 8.7 48 3.9 0.0 2.6 2 0 0 2 2 2 0 Ferlin C-terminus CD20 PF04103.15 ORF9538 - 8.7 6.4 12.1 0.12 12.4 1.3 2.9 1 1 1 3 3 3 0 CD20-like family MIR PF02815.19 ORF94940 - 2e-14 53.9 0.9 8.6e-14 51.8 0.9 2.0 1 1 2 3 3 3 2 MIR domain Mhr1 PF12829.7 ORF94940 - 0.096 12.8 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulation of mitochondrial recombination BK_channel_a PF03493.18 ORF91748 - 0.056 13.6 1.9 0.076 13.2 0.6 1.9 2 0 0 2 2 2 0 Calcium-activated BK potassium channel alpha subunit CBF_beta PF02312.17 ORF91748 - 0.16 11.6 0.9 0.25 11.0 0.9 1.3 1 0 0 1 1 1 0 Core binding factor beta subunit Chloroa_b-bind PF00504.21 ORF8833 - 1.8e-21 77.3 0.0 3.6e-21 76.4 0.0 1.5 1 1 0 1 1 1 1 Chlorophyll A-B binding protein DUF3382 PF11862.8 ORF8833 - 0.091 13.0 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3382) DUF2937 PF11157.8 ORF87927 - 0.017 14.9 1.8 0.017 14.9 1.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2937) PPIP5K2_N PF18086.1 ORF87927 - 0.081 13.1 0.9 0.64 10.2 0.1 2.5 1 1 0 2 2 2 0 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain Pkinase PF00069.25 ORF84757 - 3.3e-14 52.9 0.3 1.1e-13 51.2 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF84757 - 2.1e-09 37.1 0.0 4.2e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase DUF726 PF05277.12 ORF80984 - 1.9e-23 83.0 0.1 1.9e-23 82.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF726) DUF1041 PF06292.17 ORF80984 - 0.042 14.3 3.2 0.15 12.5 0.1 2.4 2 1 0 2 2 2 0 Domain of Unknown Function (DUF1041) AA_kinase PF00696.28 ORF80931 - 4.6e-28 98.4 0.3 5.4e-28 98.2 0.3 1.1 1 0 0 1 1 1 1 Amino acid kinase family GNT-I PF03071.15 ORF80505 - 0.0018 17.1 0.0 0.0025 16.7 0.0 1.1 1 0 0 1 1 1 1 GNT-I family Glyco_transf_18 PF15024.6 ORF80505 - 0.014 14.0 2.6 0.017 13.7 2.6 1.1 1 0 0 1 1 1 0 Glycosyltransferase family 18 SOG2 PF10428.9 ORF79527 - 0.0025 17.1 9.6 0.0025 17.1 9.6 1.1 1 0 0 1 1 1 1 RAM signalling pathway protein Mucin PF01456.17 ORF79527 - 0.0059 16.6 12.4 0.0082 16.1 12.4 1.3 1 0 0 1 1 1 1 Mucin-like glycoprotein PAP1 PF08601.10 ORF79527 - 0.0092 15.7 9.7 0.011 15.6 9.7 1.2 1 0 0 1 1 1 1 Transcription factor PAP1 MSA-2c PF12238.8 ORF79527 - 0.47 10.4 12.9 0.7 9.9 12.9 1.2 1 0 0 1 1 1 0 Merozoite surface antigen 2c Med3 PF11593.8 ORF79527 - 0.84 8.8 20.0 1.2 8.3 20.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Lin-8 PF03353.15 ORF79527 - 0.9 9.0 6.4 1.5 8.3 6.4 1.3 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Presenilin PF01080.17 ORF79527 - 3.7 6.2 6.6 5 5.8 6.6 1.1 1 0 0 1 1 1 0 Presenilin Macoilin PF09726.9 ORF79527 - 5.8 5.3 14.0 7.8 4.9 14.0 1.1 1 0 0 1 1 1 0 Macoilin family DUF515 PF04415.12 ORF79527 - 9.2 4.5 17.8 12 4.1 17.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Rieske_2 PF13806.6 ORF75055 - 0.17 11.8 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain TRIQK PF15168.6 ORF72597 - 0.8 9.7 6.0 2.1 8.3 0.5 2.5 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family Occludin_ELL PF07303.13 ORF71534 - 5e-05 24.0 4.0 0.0023 18.6 2.5 2.4 2 0 0 2 2 2 1 Occludin homology domain DUF4446 PF14584.6 ORF71534 - 0.0053 16.8 4.0 1.2 9.2 2.2 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF4446) Fib_alpha PF08702.10 ORF71534 - 0.0061 16.8 1.2 0.05 13.8 0.6 2.2 2 0 0 2 2 2 1 Fibrinogen alpha/beta chain family Spc7 PF08317.11 ORF71534 - 0.013 14.5 10.3 0.096 11.6 6.9 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF16 PF01519.16 ORF71534 - 0.015 15.8 5.2 3 8.4 0.1 3.1 2 1 1 3 3 3 0 Protein of unknown function DUF16 PI3K_P85_iSH2 PF16454.5 ORF71534 - 0.016 14.8 8.4 0.026 14.1 4.4 2.4 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain RmuC PF02646.16 ORF71534 - 0.017 14.2 0.6 0.5 9.4 0.3 2.2 2 0 0 2 2 2 0 RmuC family DUF4735 PF15882.5 ORF71534 - 0.018 14.5 0.3 1.4 8.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4735) SH3BP5 PF05276.14 ORF71534 - 0.024 14.5 7.5 1 9.1 1.7 2.5 2 1 0 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) FH2 PF02181.23 ORF71534 - 0.034 13.3 4.9 0.75 8.9 1.9 2.1 2 0 0 2 2 2 0 Formin Homology 2 Domain Mod_r PF07200.13 ORF71534 - 0.036 14.2 10.6 0.48 10.5 6.7 2.2 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Seryl_tRNA_N PF02403.22 ORF71534 - 0.047 13.9 8.8 2.3 8.5 0.3 3.2 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain SlyX PF04102.12 ORF71534 - 0.055 14.1 15.2 0.69 10.6 2.5 3.6 2 1 1 3 3 3 0 SlyX BLOC1_2 PF10046.9 ORF71534 - 0.057 13.7 5.1 0.086 13.1 2.0 2.4 3 0 0 3 3 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Laminin_II PF06009.12 ORF71534 - 0.07 13.1 4.2 0.067 13.2 1.6 2.1 2 0 0 2 2 2 0 Laminin Domain II AATF-Che1 PF13339.6 ORF71534 - 0.08 13.6 6.7 0.45 11.2 0.1 2.3 1 1 0 2 2 2 0 Apoptosis antagonizing transcription factor Sun2_CC2 PF18580.1 ORF71534 - 0.099 12.9 2.6 4 7.7 0.0 3.4 3 0 0 3 3 3 0 SUN2 coiled coil domain 2 EzrA PF06160.12 ORF71534 - 0.12 10.5 5.4 0.13 10.4 3.0 1.9 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA Uds1 PF15456.6 ORF71534 - 0.16 12.2 11.7 0.72 10.0 6.0 3.0 3 0 0 3 3 3 0 Up-regulated During Septation DUF1664 PF07889.12 ORF71534 - 0.2 11.7 3.3 0.37 10.8 0.9 2.3 3 0 0 3 3 2 0 Protein of unknown function (DUF1664) Snapin_Pallidin PF14712.6 ORF71534 - 0.21 12.1 9.7 2.3 8.7 3.9 3.1 3 0 0 3 3 3 0 Snapin/Pallidin PEARLI-4 PF05278.12 ORF71534 - 0.27 10.8 7.0 0.59 9.7 3.7 2.2 2 0 0 2 2 2 0 Arabidopsis phospholipase-like protein (PEARLI 4) EMP24_GP25L PF01105.24 ORF71534 - 0.29 11.0 2.9 2.1 8.3 1.6 2.1 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD ATG16 PF08614.11 ORF71534 - 0.42 10.8 20.6 0.28 11.4 9.1 2.7 2 1 0 3 3 3 0 Autophagy protein 16 (ATG16) Vps5 PF09325.10 ORF71534 - 0.42 10.1 6.2 3.9 6.9 2.9 2.2 2 0 0 2 2 2 0 Vps5 C terminal like FemAB PF02388.16 ORF71534 - 0.6 8.9 4.9 1.6 7.5 1.4 2.0 2 0 0 2 2 2 0 FemAB family TMPIT PF07851.13 ORF71534 - 0.82 8.9 5.9 1.3 8.2 3.0 2.0 2 0 0 2 2 2 0 TMPIT-like protein Syntaxin-6_N PF09177.11 ORF71534 - 0.93 10.1 5.8 0.98 10.0 2.7 2.1 2 0 0 2 2 2 0 Syntaxin 6, N-terminal HemX PF04375.14 ORF71534 - 1.2 8.4 8.5 2.9 7.1 4.7 2.2 2 1 0 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase XhlA PF10779.9 ORF71534 - 1.2 9.4 6.0 0.98 9.7 2.0 2.5 3 0 0 3 3 2 0 Haemolysin XhlA AAA_13 PF13166.6 ORF71534 - 1.3 7.6 4.5 0.72 8.4 1.6 1.9 2 0 0 2 2 2 0 AAA domain Spc24 PF08286.11 ORF71534 - 1.6 9.1 7.5 2.5 8.4 3.6 2.7 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 Spc29 PF17082.5 ORF71534 - 1.7 8.4 6.1 6.8 6.5 5.0 2.4 1 1 1 2 2 2 0 Spindle Pole Component 29 Shugoshin_N PF07558.11 ORF71534 - 1.9 8.4 4.7 44 4.1 0.2 3.3 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region TelA PF05816.11 ORF71534 - 2.6 7.0 8.5 1.3 8.0 4.9 1.9 2 0 0 2 2 2 0 Toxic anion resistance protein (TelA) Csm1_N PF18504.1 ORF71534 - 2.8 8.4 11.0 8.2 6.8 2.2 3.2 3 0 0 3 3 3 0 Csm1 N-terminal domain TPR_MLP1_2 PF07926.12 ORF71534 - 3.1 7.9 16.0 2.8 8.0 0.2 2.9 3 0 0 3 3 3 0 TPR/MLP1/MLP2-like protein Med9 PF07544.13 ORF71534 - 3.8 7.7 11.5 1.5 8.9 0.1 3.3 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DivIC PF04977.15 ORF71534 - 4.3 7.2 10.9 20 5.0 0.2 3.2 3 0 0 3 3 3 0 Septum formation initiator ABC_tran_CTD PF16326.5 ORF71534 - 4.5 7.6 14.0 8.3 6.7 0.4 3.2 3 0 0 3 3 3 0 ABC transporter C-terminal domain GAS PF13851.6 ORF71534 - 4.6 6.5 11.4 9.7 5.5 6.8 2.4 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding HIP1_clath_bdg PF16515.5 ORF71534 - 5.2 7.7 13.8 1.7 9.3 6.0 2.8 3 0 0 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 H-kinase_dim PF02895.14 ORF71534 - 6.1 7.3 6.9 3.4 8.1 1.3 2.8 3 0 0 3 3 3 0 Signal transducing histidine kinase, homodimeric domain Nup54 PF13874.6 ORF71534 - 6.8 6.8 12.5 16 5.6 9.0 2.4 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 Fzo_mitofusin PF04799.13 ORF71534 - 7.3 6.1 7.9 5.7 6.5 3.6 2.4 2 1 1 3 3 3 0 fzo-like conserved region OmpH PF03938.14 ORF71534 - 7.8 6.8 11.1 51 4.2 6.9 2.5 2 1 0 2 2 2 0 Outer membrane protein (OmpH-like) SOG2 PF10428.9 ORF71045 - 0.0025 17.1 9.6 0.0025 17.1 9.6 1.1 1 0 0 1 1 1 1 RAM signalling pathway protein Mucin PF01456.17 ORF71045 - 0.0059 16.6 12.4 0.0082 16.1 12.4 1.3 1 0 0 1 1 1 1 Mucin-like glycoprotein PAP1 PF08601.10 ORF71045 - 0.0092 15.7 9.7 0.011 15.6 9.7 1.2 1 0 0 1 1 1 1 Transcription factor PAP1 MSA-2c PF12238.8 ORF71045 - 0.47 10.4 12.9 0.7 9.9 12.9 1.2 1 0 0 1 1 1 0 Merozoite surface antigen 2c Med3 PF11593.8 ORF71045 - 0.84 8.8 20.0 1.2 8.3 20.0 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Lin-8 PF03353.15 ORF71045 - 0.9 9.0 6.4 1.5 8.3 6.4 1.3 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Presenilin PF01080.17 ORF71045 - 3.7 6.2 6.6 5 5.8 6.6 1.1 1 0 0 1 1 1 0 Presenilin Macoilin PF09726.9 ORF71045 - 5.8 5.3 14.0 7.8 4.9 14.0 1.1 1 0 0 1 1 1 0 Macoilin family DUF515 PF04415.12 ORF71045 - 9.2 4.5 17.8 12 4.1 17.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) Rieske_2 PF13806.6 ORF69552 - 0.17 11.8 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain CopD PF05425.13 ORF67796 - 0.011 16.1 3.2 0.011 16.1 3.2 2.3 2 2 0 2 2 2 0 Copper resistance protein D Cation_ATPase_C PF00689.21 ORF67796 - 0.43 10.3 10.1 1.2 8.9 10.1 1.9 1 1 0 1 1 1 0 Cation transporting ATPase, C-terminus RHH_4 PF13467.6 ORF67734 - 0.053 13.4 0.1 1.3 8.9 0.0 2.8 3 0 0 3 3 3 0 Ribbon-helix-helix domain UPF0242 PF06785.11 ORF64357 - 0.00015 22.0 5.6 0.00025 21.2 5.6 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus WXG100 PF06013.12 ORF64357 - 0.057 13.7 0.5 0.41 10.9 0.1 2.1 1 1 1 2 2 2 0 Proteins of 100 residues with WXG KIP1 PF07765.12 ORF64357 - 0.066 13.3 5.9 0.22 11.7 5.9 2.0 1 1 0 1 1 1 0 KIP1-like protein DUF1664 PF07889.12 ORF64357 - 0.16 12.1 4.1 0.33 11.0 4.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) YlqD PF11068.8 ORF64357 - 0.29 11.5 12.5 0.59 10.5 5.8 2.3 1 1 1 2 2 2 0 YlqD protein Fzo_mitofusin PF04799.13 ORF64357 - 0.97 9.0 5.1 3.7 7.1 5.0 1.9 2 0 0 2 2 2 0 fzo-like conserved region Atg14 PF10186.9 ORF64357 - 1.1 8.3 10.7 1.8 7.6 10.7 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF883 PF05957.13 ORF64357 - 1.7 9.3 4.2 3.2 8.4 4.2 1.5 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Fib_alpha PF08702.10 ORF64357 - 2.5 8.3 10.3 4.3 7.5 10.3 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family TMPIT PF07851.13 ORF64357 - 10 5.3 9.4 15 4.7 9.4 1.2 1 0 0 1 1 1 0 TMPIT-like protein Occludin_ELL PF07303.13 ORF64179 - 5e-05 24.0 4.0 0.0023 18.6 2.5 2.4 2 0 0 2 2 2 1 Occludin homology domain DUF4446 PF14584.6 ORF64179 - 0.0053 16.8 4.0 1.2 9.2 2.2 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF4446) Fib_alpha PF08702.10 ORF64179 - 0.0061 16.8 1.2 0.05 13.8 0.6 2.2 2 0 0 2 2 2 1 Fibrinogen alpha/beta chain family Spc7 PF08317.11 ORF64179 - 0.013 14.5 10.3 0.096 11.6 6.9 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF16 PF01519.16 ORF64179 - 0.015 15.8 5.2 3 8.4 0.1 3.1 2 1 1 3 3 3 0 Protein of unknown function DUF16 PI3K_P85_iSH2 PF16454.5 ORF64179 - 0.016 14.8 8.4 0.026 14.1 4.4 2.4 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain RmuC PF02646.16 ORF64179 - 0.017 14.2 0.6 0.5 9.4 0.3 2.2 2 0 0 2 2 2 0 RmuC family DUF4735 PF15882.5 ORF64179 - 0.018 14.5 0.3 1.4 8.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4735) SH3BP5 PF05276.14 ORF64179 - 0.024 14.5 7.5 1 9.1 1.7 2.5 2 1 0 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) FH2 PF02181.23 ORF64179 - 0.034 13.3 4.9 0.75 8.9 1.9 2.1 2 0 0 2 2 2 0 Formin Homology 2 Domain Mod_r PF07200.13 ORF64179 - 0.036 14.2 10.6 0.48 10.5 6.7 2.2 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Seryl_tRNA_N PF02403.22 ORF64179 - 0.047 13.9 8.8 2.3 8.5 0.3 3.2 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain SlyX PF04102.12 ORF64179 - 0.055 14.1 15.2 0.69 10.6 2.5 3.6 2 1 1 3 3 3 0 SlyX BLOC1_2 PF10046.9 ORF64179 - 0.057 13.7 5.1 0.086 13.1 2.0 2.4 3 0 0 3 3 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Laminin_II PF06009.12 ORF64179 - 0.07 13.1 4.2 0.067 13.2 1.6 2.1 2 0 0 2 2 2 0 Laminin Domain II AATF-Che1 PF13339.6 ORF64179 - 0.08 13.6 6.7 0.45 11.2 0.1 2.3 1 1 0 2 2 2 0 Apoptosis antagonizing transcription factor Sun2_CC2 PF18580.1 ORF64179 - 0.099 12.9 2.6 4 7.7 0.0 3.4 3 0 0 3 3 3 0 SUN2 coiled coil domain 2 EzrA PF06160.12 ORF64179 - 0.12 10.5 5.4 0.13 10.4 3.0 1.9 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA Uds1 PF15456.6 ORF64179 - 0.16 12.2 11.7 0.72 10.0 6.0 3.0 3 0 0 3 3 3 0 Up-regulated During Septation DUF1664 PF07889.12 ORF64179 - 0.2 11.7 3.3 0.37 10.8 0.9 2.3 3 0 0 3 3 2 0 Protein of unknown function (DUF1664) Snapin_Pallidin PF14712.6 ORF64179 - 0.21 12.1 9.7 2.3 8.7 3.9 3.1 3 0 0 3 3 3 0 Snapin/Pallidin PEARLI-4 PF05278.12 ORF64179 - 0.27 10.8 7.0 0.59 9.7 3.7 2.2 2 0 0 2 2 2 0 Arabidopsis phospholipase-like protein (PEARLI 4) EMP24_GP25L PF01105.24 ORF64179 - 0.29 11.0 2.9 2.1 8.3 1.6 2.1 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD ATG16 PF08614.11 ORF64179 - 0.42 10.8 20.6 0.28 11.4 9.1 2.7 2 1 0 3 3 3 0 Autophagy protein 16 (ATG16) Vps5 PF09325.10 ORF64179 - 0.42 10.1 6.2 3.9 6.9 2.9 2.2 2 0 0 2 2 2 0 Vps5 C terminal like FemAB PF02388.16 ORF64179 - 0.6 8.9 4.9 1.6 7.5 1.4 2.0 2 0 0 2 2 2 0 FemAB family TMPIT PF07851.13 ORF64179 - 0.82 8.9 5.9 1.3 8.2 3.0 2.0 2 0 0 2 2 2 0 TMPIT-like protein Syntaxin-6_N PF09177.11 ORF64179 - 0.93 10.1 5.8 0.98 10.0 2.7 2.1 2 0 0 2 2 2 0 Syntaxin 6, N-terminal HemX PF04375.14 ORF64179 - 1.2 8.4 8.5 2.9 7.1 4.7 2.2 2 1 0 2 2 2 0 HemX, putative uroporphyrinogen-III C-methyltransferase XhlA PF10779.9 ORF64179 - 1.2 9.4 6.0 0.98 9.7 2.0 2.5 3 0 0 3 3 2 0 Haemolysin XhlA AAA_13 PF13166.6 ORF64179 - 1.3 7.6 4.5 0.72 8.4 1.6 1.9 2 0 0 2 2 2 0 AAA domain Spc24 PF08286.11 ORF64179 - 1.6 9.1 7.5 2.5 8.4 3.6 2.7 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 Spc29 PF17082.5 ORF64179 - 1.7 8.4 6.1 6.8 6.5 5.0 2.4 1 1 1 2 2 2 0 Spindle Pole Component 29 Shugoshin_N PF07558.11 ORF64179 - 1.9 8.4 4.7 44 4.1 0.2 3.3 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region TelA PF05816.11 ORF64179 - 2.6 7.0 8.5 1.3 8.0 4.9 1.9 2 0 0 2 2 2 0 Toxic anion resistance protein (TelA) Csm1_N PF18504.1 ORF64179 - 2.8 8.4 11.0 8.2 6.8 2.2 3.2 3 0 0 3 3 3 0 Csm1 N-terminal domain TPR_MLP1_2 PF07926.12 ORF64179 - 3.1 7.9 16.0 2.8 8.0 0.2 2.9 3 0 0 3 3 3 0 TPR/MLP1/MLP2-like protein Med9 PF07544.13 ORF64179 - 3.8 7.7 11.5 1.5 8.9 0.1 3.3 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DivIC PF04977.15 ORF64179 - 4.3 7.2 10.9 20 5.0 0.2 3.2 3 0 0 3 3 3 0 Septum formation initiator ABC_tran_CTD PF16326.5 ORF64179 - 4.5 7.6 14.0 8.3 6.7 0.4 3.2 3 0 0 3 3 3 0 ABC transporter C-terminal domain GAS PF13851.6 ORF64179 - 4.6 6.5 11.4 9.7 5.5 6.8 2.4 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding HIP1_clath_bdg PF16515.5 ORF64179 - 5.2 7.7 13.8 1.7 9.3 6.0 2.8 3 0 0 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 H-kinase_dim PF02895.14 ORF64179 - 6.1 7.3 6.9 3.4 8.1 1.3 2.8 3 0 0 3 3 3 0 Signal transducing histidine kinase, homodimeric domain Nup54 PF13874.6 ORF64179 - 6.8 6.8 12.5 16 5.6 9.0 2.4 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 Fzo_mitofusin PF04799.13 ORF64179 - 7.3 6.1 7.9 5.7 6.5 3.6 2.4 2 1 1 3 3 3 0 fzo-like conserved region OmpH PF03938.14 ORF64179 - 7.8 6.8 11.1 51 4.2 6.9 2.5 2 1 0 2 2 2 0 Outer membrane protein (OmpH-like) LRR_6 PF13516.6 ORF62948 - 5.4e-06 26.0 0.0 5.4e-05 22.9 0.1 2.3 2 0 0 2 2 2 1 Leucine Rich repeat LRR_4 PF12799.7 ORF62948 - 0.021 15.3 0.0 0.044 14.2 0.0 1.6 1 0 0 1 1 1 0 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF62948 - 0.19 11.5 0.0 2.1 8.2 0.0 2.1 2 0 0 2 2 2 0 Leucine rich repeat zf-B_box PF00643.24 ORF61673 - 8e-05 22.7 8.0 8e-05 22.7 8.0 2.2 2 0 0 2 2 2 1 B-box zinc finger DUF4028 PF13220.6 ORF61673 - 0.11 12.3 3.3 1.5 8.6 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4028) HetR_C PF18460.1 ORF61673 - 0.13 12.2 0.0 3.9 7.5 0.0 2.6 2 0 0 2 2 2 0 Heterocyst differentiation regulator C-terminal Hood domain LETM1 PF07766.13 ORF61673 - 0.28 10.5 8.0 0.19 11.1 5.4 2.1 1 1 1 2 2 2 0 LETM1-like protein ACP_PD PF04336.12 ORF61673 - 0.51 10.8 2.6 0.79 10.2 0.3 2.4 2 1 1 3 3 3 0 Acyl carrier protein phosphodiesterase Prok-RING_4 PF14447.6 ORF61673 - 0.99 9.3 13.0 8.8 6.3 0.2 2.9 3 0 0 3 3 3 0 Prokaryotic RING finger family 4 Goodbye PF17109.5 ORF61673 - 3.1 8.3 9.2 1.3 9.5 0.6 3.0 2 1 1 3 3 3 0 fungal STAND N-terminal Goodbye domain DSPc PF00782.20 ORF60034 - 6.9e-15 55.0 0.0 9.6e-15 54.6 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF60034 - 0.00095 18.8 0.0 0.0012 18.4 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF60034 - 0.0038 17.4 0.0 0.0058 16.8 0.0 1.2 1 0 0 1 1 1 1 Inositol hexakisphosphate Init_tRNA_PT PF04179.12 ORF60034 - 0.15 12.4 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 Rit1 DUSP-like domain CsbD PF05532.12 ORF57082 - 1.5 8.8 8.1 0.35 10.8 2.5 2.8 3 0 0 3 3 3 0 CsbD-like DS PF01916.17 ORF5624 - 0.17 11.1 2.5 0.19 10.9 0.5 1.9 1 1 1 2 2 2 0 Deoxyhypusine synthase TEA PF01285.18 ORF5624 - 0.77 9.9 6.6 0.1 12.7 0.9 2.5 2 1 1 3 3 3 0 TEA/ATTS domain AHD PF17793.1 ORF5624 - 1.5 8.7 4.9 6.6 6.6 0.4 3.2 2 1 1 3 3 3 0 ANC1 homology domain (AHD) C2 PF00168.30 ORF52093 - 1.9e-14 53.8 0.1 2.7e-14 53.3 0.1 1.2 1 0 0 1 1 1 1 C2 domain APH PF01636.23 ORF51919 - 1.1e-11 45.1 1.4 2.7e-11 43.8 0.3 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family S_locus_glycop PF00954.20 ORF45960 - 0.31 11.6 3.1 0.63 10.6 0.5 2.5 2 1 1 3 3 3 0 S-locus glycoprotein domain Arg_decarb_HB PF17810.1 ORF42512 - 1.1e-22 80.0 0.4 2.5e-22 78.9 0.4 1.6 1 0 0 1 1 1 1 Arginine decarboxylase helical bundle domain Arg_decarbox_C PF17944.1 ORF42512 - 8.7e-17 61.4 2.3 8.7e-17 61.4 2.3 1.8 2 0 0 2 2 2 1 Arginine decarboxylase C-terminal helical extension Pkinase PF00069.25 ORF38914 - 0.0025 17.2 0.0 0.004 16.5 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain F-box PF00646.33 ORF3860 - 2.8e-05 23.9 1.5 0.00037 20.3 0.1 2.4 2 0 0 2 2 2 1 F-box domain F-box-like PF12937.7 ORF3860 - 4.1e-05 23.4 0.5 8.9e-05 22.3 0.5 1.5 1 0 0 1 1 1 1 F-box-like MT PF12777.7 ORF3860 - 0.00028 20.1 0.2 0.00032 19.8 0.2 1.2 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor DrrA_P4M PF14860.6 ORF3860 - 0.11 12.4 1.1 4.2 7.3 0.1 2.5 2 0 0 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain DUF3298 PF11738.8 ORF34830 - 0.52 11.4 7.3 0.57 11.3 0.8 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3298) DUF2115 PF09888.9 ORF34830 - 4.3 7.8 6.5 0.72 10.4 2.2 1.9 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2115) DUF4718 PF15842.5 ORF34307 - 0.052 13.3 0.1 0.085 12.7 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) MFS_1 PF07690.16 ORF33456 - 9.7e-10 37.9 9.6 1.5e-09 37.2 9.6 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily BT1 PF03092.16 ORF33456 - 1.9e-07 29.7 18.0 0.00041 18.7 6.3 2.9 1 1 1 3 3 3 3 BT1 family EI24 PF07264.11 ORF33456 - 0.0047 17.2 11.0 0.024 14.9 4.2 2.3 1 1 1 2 2 2 2 Etoposide-induced protein 2.4 (EI24) MFS_1_like PF12832.7 ORF33456 - 0.46 9.3 16.1 0.7 8.7 12.6 2.0 1 1 1 2 2 2 0 MFS_1 like family CitMHS PF03600.16 ORF33456 - 0.52 9.5 15.0 0.62 9.2 14.5 1.4 1 1 0 1 1 1 0 Citrate transporter FtsK_4TM PF13491.6 ORF33456 - 0.79 9.4 9.0 1.4 8.6 3.4 2.5 2 1 0 2 2 2 0 4TM region of DNA translocase FtsK/SpoIIIE ABC_tran PF00005.27 ORF32582 - 0.0031 18.0 0.0 0.0048 17.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter E1_dh PF00676.20 ORF30224 - 1.2e-75 254.3 1.6 1.3e-75 254.1 1.6 1.0 1 0 0 1 1 1 1 Dehydrogenase E1 component Transketolase_N PF00456.21 ORF30224 - 8e-05 21.7 0.0 0.00011 21.3 0.0 1.1 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 ORF30224 - 0.0027 17.0 0.0 0.0089 15.3 0.0 1.8 1 1 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 ORF30224 - 0.23 11.2 1.3 14 5.5 0.1 2.5 3 0 0 3 3 3 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FKBP_C PF00254.28 ORF25802 - 5.9e-22 77.8 0.0 8.6e-22 77.3 0.0 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF4301 PF14134.6 ORF25221 - 0.21 10.3 0.4 15 4.3 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4301) BRCT_2 PF16589.5 ORF25221 - 1.1 9.8 5.4 1 9.8 0.3 2.5 3 0 0 3 3 3 0 BRCT domain, a BRCA1 C-terminus domain MFS_1 PF07690.16 ORF240 - 9.7e-10 37.9 9.6 1.5e-09 37.2 9.6 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily BT1 PF03092.16 ORF240 - 1.9e-07 29.7 18.0 0.00041 18.7 6.3 2.9 1 1 1 3 3 3 3 BT1 family EI24 PF07264.11 ORF240 - 0.0047 17.2 11.0 0.024 14.9 4.2 2.3 1 1 1 2 2 2 2 Etoposide-induced protein 2.4 (EI24) MFS_1_like PF12832.7 ORF240 - 0.46 9.3 16.1 0.7 8.7 12.6 2.0 1 1 1 2 2 2 0 MFS_1 like family CitMHS PF03600.16 ORF240 - 0.52 9.5 15.0 0.62 9.2 14.5 1.4 1 1 0 1 1 1 0 Citrate transporter FtsK_4TM PF13491.6 ORF240 - 0.79 9.4 9.0 1.4 8.6 3.4 2.5 2 1 0 2 2 2 0 4TM region of DNA translocase FtsK/SpoIIIE Dynein_attach_N PF15867.5 ORF20650 - 4.9e-17 61.7 0.3 4.9e-17 61.7 0.3 2.0 2 0 0 2 2 2 1 Dynein attachment factor N-terminus RPAP3_C PF13877.6 ORF20650 - 5.9e-05 23.5 0.0 0.00011 22.6 0.0 1.5 1 0 0 1 1 1 1 Potential Monad-binding region of RPAP3 SelB-wing_2 PF09106.11 ORF20650 - 0.0097 16.1 0.1 0.044 14.0 0.2 2.1 2 0 0 2 2 2 1 Elongation factor SelB, winged helix Tim17 PF02466.19 ORF19190 - 7.4e-08 32.8 1.3 1.1e-07 32.2 1.3 1.3 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Ribosomal_L37e PF01907.19 ORF18553 - 0.016 15.4 6.7 0.061 13.5 6.7 2.1 1 1 0 1 1 1 0 Ribosomal protein L37e PMP1_2 PF08114.11 ORF18553 - 0.14 12.0 1.5 0.15 11.8 0.3 1.7 2 0 0 2 2 2 0 ATPase proteolipid family HD_2 PF12917.7 ORF1851 - 0.0098 15.7 0.1 0.015 15.0 0.1 1.3 1 0 0 1 1 1 1 HD containing hydrolase-like enzyme MerB PF03243.15 ORF1851 - 0.12 12.5 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Alkylmercury lyase V-set PF07686.17 ORF1851 - 0.21 11.8 1.5 0.85 9.8 0.3 2.3 1 1 1 2 2 2 0 Immunoglobulin V-set domain Exo_endo_phos PF03372.23 ORF150545 - 0.0049 16.4 0.1 0.0057 16.2 0.1 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Salp15 PF12115.8 ORF150488 - 0.034 14.6 2.5 0.11 13.0 0.8 2.2 2 0 0 2 2 2 0 Salivary protein of 15kDa inhibits CD4+ T cell activation Toxin_20 PF08089.11 ORF150488 - 0.054 13.6 1.8 0.13 12.4 1.8 1.7 1 0 0 1 1 1 0 Huwentoxin-II family C2 PF00168.30 ORF149482 - 1.9e-14 53.8 0.1 2.7e-14 53.3 0.1 1.2 1 0 0 1 1 1 1 C2 domain Peripla_BP_6 PF13458.6 ORF148571 - 0.019 14.7 0.0 0.028 14.1 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein T2SSM_b PF10741.9 ORF148571 - 0.059 13.2 0.3 0.14 12.0 0.2 1.7 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein M subtype b PRT_C PF08372.10 ORF148571 - 0.13 12.0 0.3 0.4 10.4 0.0 1.8 2 0 0 2 2 2 0 Plant phosphoribosyltransferase C-terminal HSP70 PF00012.20 ORF144197 - 6.5e-57 193.1 0.8 7.4e-57 192.9 0.8 1.0 1 0 0 1 1 1 1 Hsp70 protein Prenyltransf PF01255.19 ORF144197 - 0.012 15.2 0.3 0.018 14.6 0.3 1.3 1 0 0 1 1 1 0 Putative undecaprenyl diphosphate synthase GRA6 PF05084.13 ORF144125 - 0.02 14.9 0.0 0.029 14.4 0.0 1.2 1 0 0 1 1 1 0 Granule antigen protein (GRA6) Arm PF00514.23 ORF144125 - 0.022 14.8 0.4 11 6.2 0.1 3.5 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat S_locus_glycop PF00954.20 ORF13764 - 0.31 11.6 3.1 0.63 10.6 0.5 2.5 2 1 1 3 3 3 0 S-locus glycoprotein domain Scramblase PF03803.15 ORF133216 - 4.6e-17 62.1 2.5 6.4e-17 61.6 2.5 1.2 1 0 0 1 1 1 1 Scramblase ERGIC_N PF13850.6 ORF132229 - 0.052 13.9 0.0 0.084 13.2 0.0 1.4 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF468 PF04318.12 ORF132229 - 0.076 13.7 0.4 0.37 11.5 0.0 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF468) Rad21_Rec8 PF04824.16 ORF132229 - 0.097 12.0 0.1 0.19 11.0 0.1 1.5 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein PCNA_N PF00705.18 ORF132123 - 8.3e-46 154.8 2.8 1.6e-45 153.9 0.5 2.2 3 0 0 3 3 3 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 ORF132123 - 4.8e-37 127.0 3.4 1.3e-35 122.3 0.2 2.7 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 ORF132123 - 2e-09 37.3 0.9 2.5e-09 37.0 0.9 1.2 1 0 0 1 1 1 1 Rad9 Rad1 PF02144.16 ORF132123 - 7.4e-06 25.2 4.2 6.5e-05 22.1 4.2 1.9 1 1 0 1 1 1 1 Repair protein Rad1/Rec1/Rad17 Hus1 PF04005.12 ORF132123 - 0.017 14.2 0.3 0.067 12.3 0.3 2.0 1 1 0 1 1 1 0 Hus1-like protein SsgA PF04686.12 ORF132123 - 0.097 12.7 0.0 0.29 11.2 0.0 1.9 1 0 0 1 1 1 0 Streptomyces sporulation and cell division protein, SsgA DUF4886 PF16227.5 ORF132123 - 0.13 11.4 0.0 0.23 10.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4886) ERGIC_N PF13850.6 ORF130014 - 0.019 15.3 0.2 0.042 14.2 0.1 1.7 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ERM PF00769.19 ORF128598 - 0.00023 21.1 0.8 0.00023 21.1 0.8 1.6 2 0 0 2 2 2 1 Ezrin/radixin/moesin family TPR_MLP1_2 PF07926.12 ORF128598 - 0.4 10.7 6.7 0.47 10.5 4.8 2.2 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein PP1_inhibitor PF05361.12 ORF115811 - 0.012 15.6 0.6 0.037 14.0 0.6 1.8 1 0 0 1 1 1 0 PKC-activated protein phosphatase-1 inhibitor zf-C4_ClpX PF06689.13 ORF113271 - 0.14 12.1 0.0 0.14 12.1 0.0 4.3 5 0 0 5 5 5 0 ClpX C4-type zinc finger Stc1 PF12898.7 ORF113271 - 0.31 11.6 13.4 4.1 8.0 1.3 4.3 3 1 0 3 3 3 0 Stc1 domain AP_endonuc_2 PF01261.24 ORF10983 - 1.8e-33 115.7 0.9 2.2e-33 115.5 0.9 1.0 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Glyco_hydro_31 PF01055.26 ORF109550 - 8.4e-19 68.1 0.3 1.2e-18 67.6 0.3 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF109550 - 0.0047 17.2 0.1 0.012 15.9 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) Glyco_hydro_31 PF01055.26 ORF107987 - 8.4e-19 68.1 0.3 1.2e-18 67.6 0.3 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF107987 - 0.0046 17.2 0.1 0.012 15.9 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) FliMN_C PF01052.20 ORF107987 - 0.091 12.8 0.0 1.9 8.6 0.0 2.2 2 0 0 2 2 2 0 Type III flagellar switch regulator (C-ring) FliN C-term Selenoprotein_S PF06936.11 ORF104723 - 9.7 6.0 13.1 15 5.3 13.1 1.4 1 0 0 1 1 1 0 Selenoprotein S (SelS) Rcd1 PF04078.13 ORF104486 - 0.0044 16.4 0.8 0.0067 15.8 0.8 1.2 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like PRESAN PF09687.10 ORF101537 - 0.014 15.9 8.4 0.37 11.4 3.8 2.2 2 0 0 2 2 2 0 Plasmodium RESA N-terminal Glycos_transf_2 PF00535.26 NODE_27961_length_770_cov_3.333333_g21973_i0reverse_frame_1 - 1.1e-29 103.5 0.0 1.4e-29 103.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 NODE_27961_length_770_cov_3.333333_g21973_i0reverse_frame_1 - 4.2e-09 36.6 0.0 5.6e-09 36.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 NODE_27961_length_770_cov_3.333333_g21973_i0reverse_frame_1 - 1.1e-05 25.1 0.3 0.0019 17.8 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 DUF809 PF05663.11 NODE_27956_length_770_cov_6.836735_g21677_i1forward_frame_1 - 3.9 7.6 4.9 3.9 7.6 1.1 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF809) Carbam_trans_C PF16861.5 NODE_27919_length_771_cov_90.786685_g21939_i0reverse_frame_1 - 3.1e-54 183.1 0.0 4.1e-54 182.7 0.0 1.1 1 0 0 1 1 1 1 Carbamoyltransferase C-terminus Sua5_yciO_yrdC PF01300.18 NODE_27919_length_771_cov_90.786685_g21939_i0reverse_frame_1 - 5.9e-05 22.6 0.0 0.00018 21.0 0.0 1.8 2 0 0 2 2 2 1 Telomere recombination FAM183 PF14886.6 NODE_27884_length_771_cov_919.995924_g21909_i0reverse_frame_1 - 0.0003 21.5 0.9 0.04 14.6 0.0 2.5 2 1 0 2 2 2 2 FAM183A and FAM183B related DUF5450 PF17529.2 NODE_27878_length_772_cov_2.496608_g21905_i0forward_frame_3 - 0.15 12.2 5.6 0.11 12.6 2.3 2.1 1 1 0 2 2 2 0 Family of unknown function (DUF5450) PX PF00787.24 NODE_27878_length_772_cov_2.496608_g21905_i0forward_frame_2 - 0.0057 16.6 5.6 0.013 15.5 5.5 1.9 1 1 0 1 1 1 1 PX domain COMMD1_N PF17221.3 NODE_27878_length_772_cov_2.496608_g21905_i0forward_frame_2 - 0.13 12.5 1.2 18 5.7 0.2 2.5 1 1 1 2 2 2 0 COMMD1 N-terminal domain Ribosomal_L4 PF00573.22 NODE_27844_length_772_cov_1010.139756_g21873_i0reverse_frame_2 - 0.00069 19.4 0.0 0.00089 19.0 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family BSD PF03909.17 NODE_27844_length_772_cov_1010.139756_g21873_i0reverse_frame_2 - 0.11 12.5 0.2 0.2 11.7 0.2 1.4 1 0 0 1 1 1 0 BSD domain MORN PF02493.20 NODE_27834_length_773_cov_62.399729_g21865_i0reverse_frame_3 - 0.0015 18.3 7.9 0.012 15.5 0.3 4.1 5 0 0 5 5 5 2 MORN repeat SIP PF04954.13 NODE_27827_length_773_cov_88.117886_g21858_i0forward_frame_3 - 0.94 10.0 4.2 4.4 7.8 4.2 2.2 1 1 0 1 1 1 0 Siderophore-interacting protein Phage_B PF02304.15 NODE_27784_length_774_cov_4.098782_g21825_i0reverse_frame_2 - 0.011 16.1 0.1 0.02 15.3 0.1 1.4 1 0 0 1 1 1 0 Scaffold protein B DUF2475 PF10629.9 ORF99697 - 0.015 15.5 0.0 0.047 13.9 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2475) zf-C2H2 PF00096.26 ORF96016 - 3.2e-18 65.1 22.6 8.9e-05 22.7 0.5 4.3 4 0 0 4 4 4 4 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF96016 - 3.9e-15 55.2 20.2 0.0013 19.4 1.3 4.3 4 0 0 4 4 4 4 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF96016 - 6.2e-15 54.8 28.4 1.5e-07 31.5 1.3 5.2 5 0 0 5 5 5 3 Zinc-finger double domain zf-C2H2_jaz PF12171.8 ORF96016 - 4e-07 30.1 12.2 0.13 12.6 0.2 4.4 4 0 0 4 4 4 3 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 ORF96016 - 1.9e-06 28.0 11.9 0.067 13.6 0.1 4.0 4 0 0 4 4 4 3 Zinc-finger of C2H2 type FOXP-CC PF16159.5 ORF96016 - 0.00098 19.7 4.8 0.98 10.1 0.1 3.6 2 1 1 3 3 3 1 FOXP coiled-coil domain zf-C2H2_8 PF15909.5 ORF96016 - 0.012 15.9 9.1 1.5 9.2 4.3 2.7 1 1 2 3 3 3 0 C2H2-type zinc ribbon zf-Di19 PF05605.12 ORF96016 - 0.026 14.8 0.7 0.026 14.8 0.7 2.6 1 1 1 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding zf_UBZ PF18439.1 ORF96016 - 0.03 13.9 2.5 1.6 8.4 0.0 3.8 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-C2H2_6 PF13912.6 ORF96016 - 0.032 14.2 1.2 0.032 14.2 1.2 4.1 4 1 0 4 4 4 0 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF96016 - 0.13 12.0 10.9 0.39 10.5 0.2 3.3 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-TRAF PF02176.18 ORF96016 - 0.41 11.4 9.5 0.25 12.0 1.0 2.9 1 1 2 3 3 3 0 TRAF-type zinc finger zf-LYAR PF08790.11 ORF96016 - 1.5 8.8 9.7 18 5.3 0.3 4.1 4 0 0 4 4 4 0 LYAR-type C2HC zinc finger zf-CGNR PF11706.8 ORF96016 - 1.6 8.7 6.7 2.8 7.9 0.0 3.2 4 0 0 4 4 3 0 CGNR zinc finger CpXC PF14353.6 ORF96016 - 1.8 8.6 7.2 1.9 8.5 0.2 3.3 2 1 2 4 4 4 0 CpXC protein zf-C2HC_2 PF13913.6 ORF96016 - 2.1 8.4 7.6 28 4.8 0.7 3.8 4 0 0 4 4 4 0 zinc-finger of a C2HC-type BCL_N PF04714.13 ORF96016 - 3.1 7.9 16.3 0.91 9.6 9.9 3.0 2 1 1 3 3 3 0 BCL7, N-terminal conserver region NifU_N PF01592.16 ORF95427 - 0.23 11.6 0.2 0.52 10.4 0.2 1.5 1 0 0 1 1 1 0 NifU-like N terminal domain PPR_2 PF13041.6 ORF95172 - 2e-28 98.3 0.0 2.4e-08 34.0 0.0 5.3 3 1 2 5 5 5 4 PPR repeat family PPR_3 PF13812.6 ORF95172 - 1.8e-23 82.3 0.0 3.1e-10 40.0 0.0 5.1 3 2 2 5 5 5 5 Pentatricopeptide repeat domain PPR PF01535.20 ORF95172 - 2.3e-21 74.5 0.5 0.00022 21.3 0.0 6.5 7 0 0 7 7 7 5 PPR repeat PPR_long PF17177.4 ORF95172 - 1.9e-17 63.3 0.0 6.5e-11 42.0 0.0 2.4 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF95172 - 5.9e-16 57.9 0.0 6.2e-06 25.8 0.0 5.4 7 0 0 7 7 7 3 PPR repeat TPR_14 PF13428.6 ORF95172 - 0.00099 19.7 0.0 4.2 8.4 0.0 4.5 4 1 1 5 5 5 1 Tetratricopeptide repeat ECSIT PF06239.11 ORF95172 - 0.027 13.6 0.0 0.063 12.4 0.0 1.6 1 0 0 1 1 1 0 Evolutionarily conserved signalling intermediate in Toll pathway ATP13 PF12921.7 ORF95172 - 0.21 11.5 0.0 1.6 8.6 0.0 2.1 1 1 1 2 2 2 0 Mitochondrial ATPase expression Chloroa_b-bind PF00504.21 ORF93046 - 1.8e-30 106.6 0.7 6.2e-30 104.9 0.1 1.8 2 0 0 2 2 2 1 Chlorophyll A-B binding protein His_Phos_1 PF00300.22 ORF89865 - 3.6e-36 124.7 0.0 1.8e-28 99.5 0.2 2.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) Porin_OmpG PF09381.10 ORF89865 - 0.055 13.2 0.1 0.1 12.3 0.1 1.4 1 0 0 1 1 1 0 Outer membrane protein G (OmpG) Pollen_allerg_1 PF01357.21 ORF87816 - 0.11 12.5 0.1 0.29 11.2 0.1 1.7 1 0 0 1 1 1 0 Pollen allergen AC_N PF16214.5 ORF87816 - 1.1 8.3 8.2 1.4 7.9 8.2 1.2 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region tRNA-synt_2c PF01411.19 ORF82876 - 2.7e-68 230.8 0.0 3.3e-68 230.6 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) NTP_transferase PF00483.23 ORF8267 - 7.2e-48 163.3 0.0 8.2e-48 163.1 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 ORF8267 - 5.1e-07 30.2 0.0 6.4e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 ORF8267 - 0.11 12.2 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Sigma70_r4 PF04545.16 ORF81267 - 2e-18 65.6 1.1 6e-17 60.9 0.3 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 Sigma70_r2 PF04542.14 ORF81267 - 5.5e-17 61.3 0.0 1e-16 60.4 0.0 1.5 1 0 0 1 1 1 1 Sigma-70 region 2 KORA PF16509.5 ORF81267 - 0.00059 20.1 0.6 0.31 11.3 0.2 2.5 2 0 0 2 2 2 2 TrfB plasmid transcriptional repressor Sigma70_r3 PF04539.16 ORF81267 - 0.0056 16.8 2.1 3.3 7.9 0.4 2.8 2 0 0 2 2 2 2 Sigma-70 region 3 HTH_10 PF04967.12 ORF81267 - 0.013 15.2 0.0 0.16 11.8 0.0 2.5 2 0 0 2 2 2 0 HTH DNA binding domain UCR_14kD PF02271.16 ORF81267 - 0.028 14.4 0.6 0.36 10.8 0.1 2.7 2 1 0 2 2 2 0 Ubiquinol-cytochrome C reductase complex 14kD subunit HTH_AsnC-type PF13404.6 ORF81267 - 0.029 14.2 0.5 0.34 10.8 0.1 2.5 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain HTH_25 PF13413.6 ORF81267 - 0.031 14.2 2.2 0.47 10.4 0.1 3.2 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_3 PF01381.22 ORF81267 - 0.059 13.4 0.1 0.36 10.9 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix SANT_DAMP1_like PF16282.5 ORF81267 - 0.089 13.0 0.1 0.2 11.9 0.1 1.6 1 0 0 1 1 1 0 SANT/Myb-like domain of DAMP1 DUF5412 PF17428.2 ORF81267 - 0.11 12.4 0.1 0.21 11.5 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5412) MerR PF00376.23 ORF81267 - 0.12 12.2 0.2 4.8 7.0 0.0 2.5 2 0 0 2 2 2 0 MerR family regulatory protein HTH_31 PF13560.6 ORF81267 - 0.13 12.6 0.8 2.5 8.5 0.1 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain DUF3606 PF12244.8 ORF81267 - 0.16 11.9 1.2 20 5.2 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3606) 2Fe-2S_thioredx PF01257.19 ORF81267 - 0.18 11.7 0.0 0.63 9.9 0.0 1.8 2 0 0 2 2 2 0 Thioredoxin-like [2Fe-2S] ferredoxin IF2_N PF04760.15 ORF81267 - 0.3 10.9 3.8 9.8 6.1 0.0 3.6 5 0 0 5 5 5 0 Translation initiation factor IF-2, N-terminal region Ribosomal_L3 PF00297.22 ORF80296 - 0.022 13.7 0.3 0.022 13.7 0.3 1.7 2 0 0 2 2 2 0 Ribosomal protein L3 SUR7 PF06687.12 ORF80293 - 6.2e-05 22.7 2.9 9.8e-05 22.1 2.9 1.3 1 0 0 1 1 1 1 SUR7/PalI family DUF4337 PF14235.6 ORF80293 - 0.12 12.5 1.7 0.3 11.2 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) Ndc1_Nup PF09531.10 ORF80293 - 0.23 10.1 3.9 0.34 9.6 3.9 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Sigma_reg_N PF13800.6 ORF80293 - 0.31 11.3 12.3 0.4 11.0 0.3 2.7 2 1 0 2 2 2 0 Sigma factor regulator N-terminal Chitin_synth_2 PF03142.15 ORF80293 - 0.99 7.9 6.8 1.2 7.6 6.8 1.1 1 0 0 1 1 1 0 Chitin synthase Claudin_3 PF06653.11 ORF80293 - 7.4 6.5 19.0 6.4 6.7 1.8 2.1 1 1 1 2 2 2 0 Tight junction protein, Claudin-like DUF3123 PF11321.8 ORF7686 - 3 8.5 5.4 1.4 9.6 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3123) PEMT PF04191.13 ORF75938 - 4.2e-10 40.0 0.0 6.9e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 Phospholipid methyltransferase ICMT PF04140.14 ORF75938 - 4.4e-05 23.8 0.0 7.1e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family NnrU PF07298.11 ORF75938 - 0.0012 18.4 0.0 0.0015 18.1 0.0 1.1 1 0 0 1 1 1 1 NnrU protein DUF1295 PF06966.12 ORF75938 - 0.0069 15.9 0.0 0.012 15.1 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) DUF4337 PF14235.6 ORF75938 - 0.22 11.6 0.0 0.22 11.6 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) DUF3176 PF11374.8 ORF75858 - 0.21 11.8 1.4 0.46 10.7 1.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3176) DUF1129 PF06570.11 ORF75250 - 0.023 14.2 7.7 0.033 13.7 5.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1129) DUF2207 PF09972.9 ORF75250 - 1.9 7.1 5.7 2.4 6.8 5.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) LRR_9 PF14580.6 ORF73254 - 2.6e-10 40.1 0.7 1.3e-09 37.8 0.1 2.0 1 1 1 2 2 2 1 Leucine-rich repeat LRR_4 PF12799.7 ORF73254 - 2e-06 28.0 3.2 0.086 13.3 1.1 3.1 2 1 1 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF73254 - 0.086 12.6 0.9 2.1 8.2 0.3 2.5 2 1 1 3 3 3 0 Leucine rich repeat DUF4079 PF13301.6 ORF72236 - 7e-48 162.4 0.4 1.2e-47 161.6 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF4079) DUF2157 PF09925.9 ORF72236 - 1.7e-05 24.6 2.7 1.7e-05 24.6 2.7 2.4 2 1 0 3 3 3 1 Predicted membrane protein (DUF2157) DUF2206 PF09971.9 ORF72236 - 0.016 13.9 0.0 0.024 13.4 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) DUF2681 PF10883.8 ORF72236 - 0.085 13.3 0.1 0.22 12.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) DUF5129 PF17173.4 ORF72236 - 0.091 11.9 0.5 0.2 10.8 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5129) DUF2207 PF09972.9 ORF72236 - 0.15 10.8 0.0 0.23 10.2 0.0 1.3 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2040 PF09745.9 ORF71439 - 0.12 12.4 1.5 0.21 11.6 1.5 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 55 (DUF2040) SHIPPO-rpt PF07004.12 ORF71439 - 0.14 13.1 0.2 0.14 13.1 0.2 2.6 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat tRNA-synt_2c PF01411.19 ORF70484 - 2.7e-68 230.8 0.0 3.3e-68 230.6 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) CBM_21 PF03370.13 ORF6820 - 0.026 14.7 0.1 0.026 14.7 0.1 1.8 2 1 0 2 2 2 0 Carbohydrate/starch-binding module (family 21) CBM_21 PF03370.13 ORF66926 - 0.026 14.7 0.1 0.026 14.7 0.1 1.8 2 1 0 2 2 2 0 Carbohydrate/starch-binding module (family 21) cNMP_binding PF00027.29 ORF60078 - 2.4e-10 40.3 0.1 6.1e-10 39.0 0.0 1.7 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain DUF3452 PF11934.8 ORF60078 - 0.089 12.3 0.1 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) DUF3644 PF12358.8 ORF60078 - 0.14 12.7 1.0 0.38 11.3 1.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3644) Myosin_N PF02736.19 ORF60078 - 0.17 11.7 0.4 0.36 10.7 0.4 1.6 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain PhyH PF05721.13 ORF59722 - 1.3e-09 38.7 0.0 1.9e-09 38.1 0.0 1.4 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) NAD_kinase PF01513.21 ORF56589 - 1.7e-21 76.7 1.8 2.4e-21 76.2 1.8 1.2 1 0 0 1 1 1 1 ATP-NAD kinase DOT1 PF08123.13 ORF56433 - 3.3e-13 49.7 0.0 4.6e-13 49.2 0.0 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 CMAS PF02353.20 ORF56433 - 7.4e-05 22.2 0.0 0.00031 20.1 0.0 1.8 1 1 1 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 ORF56433 - 0.029 15.1 0.0 0.051 14.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 ORF56433 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Met_10 PF02475.16 ORF56433 - 0.12 12.1 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_4 PF02390.17 ORF56433 - 0.2 11.1 0.0 0.28 10.6 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase SR-25 PF10500.9 ORF49487 - 0.22 11.1 24.8 0.28 10.8 24.8 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4551 PF15087.6 ORF49487 - 5.8 5.6 8.5 6.2 5.5 8.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) Secretin_N_2 PF07655.13 ORF47556 - 0.47 11.0 20.3 0.88 10.2 20.3 1.4 1 0 0 1 1 1 0 Secretin N-terminal domain CDK2AP PF09806.9 ORF47556 - 0.5 10.4 8.1 0.68 10.0 8.1 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein Apt1 PF10351.9 ORF47556 - 0.68 8.7 9.4 0.85 8.4 9.4 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain SPX PF03105.19 ORF47556 - 1.1 9.1 9.1 1.5 8.7 9.1 1.1 1 0 0 1 1 1 0 SPX domain CBM_X2 PF03442.14 ORF46394 - 0.12 12.6 0.2 4.3 7.5 0.0 2.6 2 0 0 2 2 2 0 Carbohydrate binding domain X2 MORN PF02493.20 ORF4255 - 3.9e-06 26.4 0.9 0.00087 19.1 0.1 2.5 2 0 0 2 2 2 2 MORN repeat TraB PF01963.17 ORF3912 - 0.059 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 TraB family TRAP_alpha PF03896.16 ORF36168 - 0.079 12.2 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit CBM_21 PF03370.13 ORF35715 - 0.026 14.7 0.1 0.026 14.7 0.1 1.8 2 1 0 2 2 2 0 Carbohydrate/starch-binding module (family 21) Flavodoxin_NdrI PF07972.11 ORF35624 - 1.1e-47 161.1 0.0 1.6e-47 160.6 0.0 1.2 1 0 0 1 1 1 1 NrdI Flavodoxin like HDV_ag PF01517.18 ORF34207 - 2.1 8.1 7.9 0.087 12.6 2.1 1.5 2 0 0 2 2 2 0 Hepatitis delta virus delta antigen Acetate_kinase PF00871.17 ORF31169 - 7.8e-116 387.0 0.1 8.8e-116 386.8 0.1 1.0 1 0 0 1 1 1 1 Acetokinase family BcrAD_BadFG PF01869.20 ORF31169 - 0.011 15.3 0.2 0.022 14.2 0.2 1.7 1 1 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family AA_permease PF00324.21 ORF31118 - 1.5e-56 192.0 16.0 1.7e-56 191.8 16.0 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 ORF31118 - 6.5e-26 91.1 23.4 7.3e-26 91.0 23.4 1.0 1 0 0 1 1 1 1 Amino acid permease DUF4131 PF13567.6 ORF31118 - 1.4 8.5 9.6 3.8 7.1 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) LRR_9 PF14580.6 ORF26418 - 3.1e-58 196.1 0.9 3.9e-58 195.8 0.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 ORF26418 - 9.5e-10 38.1 0.8 9.6e-08 31.7 0.2 2.6 2 0 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 ORF26418 - 4.9e-08 33.1 7.1 0.0013 19.0 0.8 3.1 1 1 1 3 3 3 2 Leucine Rich repeats (2 copies) Cecropin PF00272.19 ORF26418 - 1.4 8.7 3.9 3.6 7.4 0.9 2.5 2 0 0 2 2 2 0 Cecropin family Stc1 PF12898.7 ORF26391 - 1.1e-05 25.9 4.8 2.2 8.9 0.4 4.5 1 1 1 3 3 3 3 Stc1 domain GST_N_3 PF13417.6 ORF22332 - 0.052 14.0 0.0 0.097 13.1 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Frigida PF07899.11 ORF22000 - 0.0094 15.3 0.2 0.11 11.7 0.1 2.0 2 0 0 2 2 2 2 Frigida-like protein DUF2162 PF09930.9 ORF19215 - 0.13 11.6 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 Predicted transporter (DUF2162) zf-C2H2 PF00096.26 ORF18305 - 8.2e-18 63.8 16.9 3.3e-06 27.2 2.4 3.9 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF18305 - 2e-11 43.7 13.9 0.00081 20.0 1.4 3.8 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF18305 - 1.6e-08 34.6 14.1 0.0001 22.6 0.3 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF18305 - 1.2e-06 28.1 3.1 1.2e-06 28.1 3.1 3.2 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF18305 - 2e-05 24.8 9.6 0.00039 20.7 0.5 2.6 1 1 1 2 2 2 2 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF18305 - 0.0058 16.4 2.8 0.015 15.0 0.2 2.4 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-met PF12874.7 ORF18305 - 0.013 15.8 0.8 0.013 15.8 0.8 4.0 4 1 0 4 4 4 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF18305 - 0.018 15.3 1.9 0.018 15.3 1.9 3.2 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 ORF18305 - 0.024 14.6 14.2 0.25 11.4 2.7 2.9 3 0 0 3 3 2 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 ORF18305 - 0.04 14.0 3.3 0.97 9.6 0.2 3.0 2 0 0 2 2 2 0 Zinc ribbon domain Mut7-C PF01927.16 ORF18305 - 0.062 13.4 3.1 0.15 12.2 3.1 1.7 1 1 0 1 1 1 0 Mut7-C RNAse domain zf-C2H2_2 PF12756.7 ORF18305 - 0.09 13.1 14.3 0.079 13.3 2.2 3.4 2 1 1 3 3 3 0 C2H2 type zinc-finger (2 copies) zf-BED PF02892.15 ORF18305 - 0.87 9.7 10.1 8.4 6.5 0.9 2.9 1 1 1 2 2 2 0 BED zinc finger tRNA_anti-codon PF01336.25 ORF15622 - 1.1e-07 31.7 0.0 2.1e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Cullin_Nedd8 PF10557.9 ORF15622 - 0.06 13.4 0.6 1.5 8.9 0.0 2.9 3 0 0 3 3 3 0 Cullin protein neddylation domain HTH_WhiA PF02650.14 ORF15622 - 0.11 12.9 0.2 1.1 9.6 0.0 2.1 2 0 0 2 2 2 0 WhiA C-terminal HTH domain CRAL_TRIO PF00650.20 ORF150916 - 1e-16 61.1 0.3 1.8e-16 60.3 0.3 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF150916 - 0.0034 17.6 0.0 0.0053 16.9 0.0 1.2 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF285 PF03382.14 ORF150916 - 0.043 13.6 0.3 0.1 12.3 0.1 1.7 2 0 0 2 2 2 0 Mycoplasma protein of unknown function, DUF285 DUF3438 PF11920.8 ORF150916 - 0.81 8.9 2.5 1.2 8.3 2.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3438) TRAP_alpha PF03896.16 ORF149092 - 0.079 12.2 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit OprB PF04966.12 ORF146319 - 0.00019 21.0 0.0 0.00024 20.6 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate-selective porin, OprB family HTH_6 PF01418.17 ORF146319 - 0.44 10.6 3.1 6.2 6.9 0.1 3.4 3 1 1 4 4 4 0 Helix-turn-helix domain, rpiR family zf-C2H2 PF00096.26 ORF143833 - 5.4e-15 54.9 26.2 3.3e-06 27.2 2.4 4.1 4 0 0 4 4 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF143833 - 1.4e-11 44.1 13.9 0.00081 20.0 1.4 4.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF143833 - 2e-08 34.3 14.1 0.0001 22.6 0.3 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF143833 - 1.2e-06 28.1 3.1 1.2e-06 28.1 3.1 3.3 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF143833 - 0.00039 20.7 0.5 0.00039 20.7 0.5 2.7 2 1 1 3 3 3 2 C2H2-type zinc ribbon zf-met PF12874.7 ORF143833 - 0.013 15.8 0.8 0.013 15.8 0.8 4.1 4 1 0 4 4 4 0 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF143833 - 0.015 15.0 0.2 0.015 15.0 0.2 2.7 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF143833 - 0.018 15.3 1.9 0.018 15.3 1.9 3.2 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 ORF143833 - 0.024 14.6 14.2 0.25 11.4 2.7 2.9 3 0 0 3 3 2 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 ORF143833 - 0.037 14.2 3.3 0.97 9.6 0.2 3.1 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2_2 PF12756.7 ORF143833 - 0.056 13.8 1.2 0.056 13.8 1.2 3.6 2 2 3 5 5 5 0 C2H2 type zinc-finger (2 copies) Mut7-C PF01927.16 ORF143833 - 0.074 13.2 3.6 0.19 11.8 3.5 1.8 1 1 0 1 1 1 0 Mut7-C RNAse domain zf-BED PF02892.15 ORF143833 - 0.86 9.7 10.1 8.4 6.5 0.9 2.9 1 1 1 2 2 2 0 BED zinc finger zf-C2HE PF16278.5 ORF143833 - 5.5 7.5 8.7 9.2 6.8 2.0 3.5 2 1 1 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger DUF5596 PF18082.1 ORF143696 - 0.13 12.1 0.0 2.4 8.1 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5596) Pkinase PF00069.25 ORF141942 - 3.6e-58 197.0 0.1 4.1e-58 196.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF141942 - 1.8e-28 99.5 0.0 2.1e-28 99.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF141942 - 6.9e-05 22.3 0.6 0.00018 20.9 0.6 1.6 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF141942 - 0.0015 18.2 0.6 0.0056 16.3 0.6 1.9 1 1 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF141942 - 0.0089 15.4 0.0 0.012 14.9 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pox_ser-thr_kin PF05445.11 ORF141942 - 0.024 13.6 0.1 0.038 13.0 0.1 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Pkinase_fungal PF17667.1 ORF141942 - 0.039 12.7 0.3 0.066 12.0 0.1 1.4 2 0 0 2 2 2 0 Fungal protein kinase RIO1 PF01163.22 ORF141942 - 0.11 12.0 1.6 0.24 11.0 1.6 1.5 1 1 0 1 1 1 0 RIO1 family APH PF01636.23 ORF141942 - 0.17 11.8 0.4 0.46 10.4 0.2 1.6 1 1 0 2 2 2 0 Phosphotransferase enzyme family DnaJ PF00226.31 ORF132177 - 4.8e-28 97.1 1.7 6.7e-28 96.6 1.7 1.2 1 0 0 1 1 1 1 DnaJ domain DUF4766 PF15973.5 ORF132177 - 2.1 9.0 18.4 5.1 7.7 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4766) HDV_ag PF01517.18 ORF129765 - 2.1 8.1 7.9 0.087 12.6 2.1 1.5 2 0 0 2 2 2 0 Hepatitis delta virus delta antigen DUF1455 PF07306.11 ORF129149 - 5.9 6.9 8.1 1.3 9.0 2.2 2.7 2 1 2 4 4 4 0 Protein of unknown function (DUF1455) Glycos_transf_4 PF00953.21 ORF127386 - 9.2e-20 71.2 15.3 9.2e-20 71.2 15.3 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 4 FixP_N PF14715.6 ORF127386 - 2.1 8.2 7.0 0.15 11.8 0.7 2.4 2 0 0 2 2 2 0 N-terminal domain of cytochrome oxidase-cbb3, FixP DUF983 PF06170.12 ORF127386 - 8.9 6.8 15.9 2.9 8.4 1.7 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF983) Pollen_allerg_1 PF01357.21 ORF124878 - 0.11 12.5 0.1 0.29 11.2 0.1 1.7 1 0 0 1 1 1 0 Pollen allergen AC_N PF16214.5 ORF124878 - 1.1 8.3 8.2 1.4 7.9 8.2 1.2 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region XPG_I PF00867.18 ORF121155 - 7.5e-26 90.3 1.0 9.6e-26 90.0 0.1 1.7 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 ORF121155 - 8.3e-24 84.0 0.0 1.3e-23 83.4 0.0 1.3 1 0 0 1 1 1 1 XPG N-terminal domain Pput2613-deam PF14427.6 ORF121155 - 0.035 14.0 0.1 9.9 6.1 0.0 2.9 3 0 0 3 3 3 0 Pput_2613-like deaminase EMC3_TMCO1 PF01956.16 ORF121155 - 0.082 12.6 0.9 0.13 12.0 0.9 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like 5_3_exonuc_N PF02739.16 ORF121155 - 0.14 12.1 0.0 0.31 10.9 0.0 1.7 1 1 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain YrhK PF14145.6 ORF119490 - 3.4e-15 55.7 11.6 9.5e-10 38.2 1.7 2.5 2 1 0 2 2 2 2 YrhK-like protein NLPC_P60 PF00877.19 ORF113161 - 6e-31 106.6 0.0 1.1e-30 105.8 0.0 1.4 1 0 0 1 1 1 1 NlpC/P60 family DUF1175 PF06672.11 ORF113161 - 2.3e-05 24.2 1.0 0.16 11.7 0.0 3.2 1 1 2 3 3 3 2 Protein of unknown function (DUF1175) DUF4326 PF14216.6 ORF113161 - 0.04 14.6 0.3 17 6.2 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4326) LRAT PF04970.13 ORF113161 - 0.07 13.4 0.0 0.18 12.1 0.0 1.7 1 0 0 1 1 1 0 Lecithin retinol acyltransferase Peptidase_C92 PF05708.12 ORF113161 - 0.12 12.5 0.0 0.9 9.6 0.0 2.2 2 0 0 2 2 2 0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Mito_fiss_reg PF05308.11 ORF109667 - 6.7 6.7 9.2 0.58 10.2 4.6 1.5 2 0 0 2 2 2 0 Mitochondrial fission regulator # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks80.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks80.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks80.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks80.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:00 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RNHCP PF12647.7 ORF109666 - 0.31 11.0 4.5 0.85 9.6 4.5 1.7 1 0 0 1 1 1 0 RNHCP domain zf-RING_2 PF13639.6 ORF109179 - 8.8e-09 35.6 10.5 1.5e-08 34.9 10.5 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF109179 - 4.6e-08 32.8 11.4 8.8e-08 31.9 11.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF109179 - 2.1e-06 27.9 6.5 5.3e-06 26.6 6.5 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 ORF109179 - 7.3e-05 22.6 11.9 0.00013 21.7 11.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF109179 - 0.00019 21.2 8.8 0.00029 20.6 8.8 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF109179 - 0.00072 19.5 10.5 0.0012 18.7 10.5 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF109179 - 0.00093 18.9 8.6 0.0021 17.8 8.6 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF109179 - 0.0041 17.1 7.5 0.0091 16.0 7.5 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-Nse PF11789.8 ORF109179 - 0.0058 16.4 6.6 0.011 15.5 6.6 1.4 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-ANAPC11 PF12861.7 ORF109179 - 0.014 15.4 3.8 0.025 14.6 3.8 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF109179 - 0.014 15.0 6.9 0.024 14.2 6.9 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF109179 - 0.021 14.7 8.5 0.041 13.8 8.5 1.5 1 0 0 1 1 1 0 PHD-finger zf-C3H2C3 PF17122.5 ORF109179 - 0.18 11.9 8.8 0.39 10.8 8.8 1.6 1 0 0 1 1 1 0 Zinc-finger zf-RING_10 PF16685.5 ORF109179 - 0.27 11.4 7.7 0.59 10.3 7.7 1.6 1 0 0 1 1 1 0 zinc RING finger of MSL2 Prok-RING_4 PF14447.6 ORF109179 - 1.1 9.1 8.2 2.3 8.2 8.2 1.6 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING-like PF08746.11 ORF109179 - 1.2 9.5 8.2 0.08 13.3 2.8 1.8 2 0 0 2 2 1 0 RING-like domain zf-RING_4 PF14570.6 ORF109179 - 1.7 8.5 7.9 4.1 7.3 7.9 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain SUR7 PF06687.12 ORF108736 - 6.2e-05 22.7 2.9 9.8e-05 22.1 2.9 1.3 1 0 0 1 1 1 1 SUR7/PalI family DUF4337 PF14235.6 ORF108736 - 0.12 12.5 1.7 0.3 11.2 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) Ndc1_Nup PF09531.10 ORF108736 - 0.23 10.1 3.9 0.34 9.6 3.9 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Sigma_reg_N PF13800.6 ORF108736 - 0.31 11.3 12.3 0.4 11.0 0.3 2.7 2 1 0 2 2 2 0 Sigma factor regulator N-terminal Chitin_synth_2 PF03142.15 ORF108736 - 0.99 7.9 6.8 1.2 7.6 6.8 1.1 1 0 0 1 1 1 0 Chitin synthase Claudin_3 PF06653.11 ORF108736 - 7.4 6.5 19.0 6.4 6.7 1.8 2.1 1 1 1 2 2 2 0 Tight junction protein, Claudin-like Ank_4 PF13637.6 ORF108121 - 0.012 16.2 0.0 0.065 13.8 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF108121 - 0.029 14.9 0.0 0.071 13.7 0.0 1.6 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF108121 - 0.074 13.4 0.0 1.7 9.1 0.0 2.3 1 1 1 2 2 2 0 Ankyrin repeats (many copies) LRR_9 PF14580.6 ORF105137 - 3.1e-58 196.1 0.9 3.9e-58 195.8 0.9 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 ORF105137 - 9.5e-10 38.1 0.8 9.6e-08 31.7 0.2 2.6 2 0 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 ORF105137 - 4.9e-08 33.1 7.1 0.0013 19.0 0.8 3.1 1 1 1 3 3 3 2 Leucine Rich repeats (2 copies) Cecropin PF00272.19 ORF105137 - 1.4 8.7 3.9 3.6 7.4 0.9 2.5 2 0 0 2 2 2 0 Cecropin family Abhydrolase_1 PF00561.20 ORF101113 - 8.5e-17 61.6 0.0 7.6e-14 52.0 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF101113 - 1.8e-13 50.4 0.0 9.7e-10 38.1 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 ORF101113 - 1.4e-07 31.3 0.2 6.4e-07 29.1 0.2 2.0 1 1 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 ORF101113 - 1e-06 29.5 0.0 1.2e-06 29.2 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family AXE1 PF05448.12 ORF101113 - 4.2e-06 25.7 1.6 0.028 13.1 0.0 3.1 2 1 1 3 3 3 2 Acetyl xylan esterase (AXE1) FSH1 PF03959.13 ORF101113 - 3.6e-05 23.5 0.0 6.7e-05 22.6 0.0 1.5 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Peptidase_S15 PF02129.18 ORF101113 - 3.8e-05 23.4 0.0 0.096 12.3 0.0 2.1 1 1 0 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_2 PF02230.16 ORF101113 - 6e-05 22.9 0.0 9.5e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 ORF101113 - 0.00012 22.0 0.0 0.0004 20.3 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF2974 PF11187.8 ORF101113 - 0.0058 16.2 0.0 0.0085 15.7 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) MetRS-N PF09635.10 ORF101113 - 0.0087 16.6 0.0 0.016 15.7 0.0 1.4 1 0 0 1 1 1 1 MetRS-N binding domain DLH PF01738.18 ORF101113 - 0.017 14.7 0.0 0.096 12.2 0.0 2.0 1 1 0 1 1 1 0 Dienelactone hydrolase family BAAT_C PF08840.11 ORF101113 - 0.034 14.1 0.0 0.38 10.6 0.0 2.2 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF818 PF05677.12 ORF101113 - 0.045 12.7 0.1 0.059 12.3 0.1 1.1 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) Abhydrolase_5 PF12695.7 ORF101113 - 0.063 13.0 0.1 0.25 11.1 0.1 1.8 1 1 1 2 2 2 0 Alpha/beta hydrolase family UPF0227 PF05728.12 ORF101113 - 0.082 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Esterase_phd PF10503.9 ORF101113 - 0.086 12.3 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Esterase PHB depolymerase Lipase_3 PF01764.25 ORF101113 - 0.11 12.3 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) Ndr PF03096.14 ORF101113 - 0.15 10.8 0.0 0.2 10.3 0.0 1.2 1 0 0 1 1 1 0 Ndr family DUF1989 PF09347.10 NODE_28086_length_767_cov_104.312842_g22079_i0forward_frame_1 - 0.23 11.1 0.0 0.32 10.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) UNC45-central PF11701.8 NODE_28051_length_768_cov_4.181446_g22050_i0forward_frame_1 - 0.13 12.2 1.5 0.87 9.5 1.5 2.2 1 1 0 1 1 1 0 Myosin-binding striated muscle assembly central TFR_dimer PF04253.15 NODE_27997_length_769_cov_92.061308_g22002_i0reverse_frame_3 - 2.7 8.1 7.6 0.92 9.6 2.5 2.4 2 1 0 3 3 3 0 Transferrin receptor-like dimerisation domain DSBA PF01323.20 NODE_27997_length_769_cov_92.061308_g22002_i0reverse_frame_3 - 4.4 7.0 7.0 9.4 6.0 1.6 2.4 1 1 0 2 2 2 0 DSBA-like thioredoxin domain DUF5551 PF17705.1 NODE_27961_length_770_cov_3.333333_g21973_i0forward_frame_2 - 0.031 13.9 0.3 0.057 13.1 0.3 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5551) AAA_23 PF13476.6 NODE_27956_length_770_cov_6.836735_g21677_i1reverse_frame_2 - 2.2 8.7 24.5 3.1 8.3 24.5 1.3 1 0 0 1 1 1 0 AAA domain DUF1158 PF06643.11 NODE_27951_length_770_cov_113.521088_g21964_i0reverse_frame_3 - 0.79 10.3 7.5 23 5.6 2.5 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1158) COX8 PF02285.15 NODE_27951_length_770_cov_113.521088_g21964_i0forward_frame_3 - 0.14 12.1 1.0 16 5.5 0.0 3.0 2 0 0 2 2 2 0 Cytochrome oxidase c subunit VIII Flavi_NS1 PF00948.21 NODE_27950_length_770_cov_120.880272_g21963_i0forward_frame_3 - 0.18 10.6 0.7 0.34 9.7 0.7 1.4 1 0 0 1 1 1 0 Flavivirus non-structural Protein NS1 Lysyl_oxidase PF01186.17 NODE_27946_length_770_cov_141.185034_g21959_i0forward_frame_2 - 2.6 7.7 6.7 1.9 8.1 5.1 1.5 2 0 0 2 2 2 0 Lysyl oxidase YfhE PF14152.6 NODE_27897_length_771_cov_203.676630_g21922_i0forward_frame_3 - 0.14 12.3 0.6 0.26 11.4 0.6 1.4 1 0 0 1 1 1 0 YfhE-like protein DUF1556 PF07590.11 ORF98765 - 0.18 12.1 2.9 14 6.1 0.2 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1556) Ribosomal_L2_C PF03947.18 ORF97836 - 3.1e-43 147.0 3.2 5.3e-43 146.2 3.2 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 ORF97836 - 6.9e-15 54.8 0.1 1.8e-14 53.4 0.1 1.7 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Erythro-docking PF09277.11 ORF97427 - 0.043 13.7 0.8 0.043 13.7 0.8 1.9 2 0 0 2 2 2 0 Erythronolide synthase, docking TIM PF00121.18 ORF95725 - 5.1e-84 281.4 0.2 5.9e-84 281.2 0.2 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase Ras PF00071.22 ORF95232 - 9.5e-26 90.3 0.1 1.2e-25 90.0 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF95232 - 4.1e-17 62.5 0.0 7.9e-17 61.6 0.0 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF95232 - 7.1e-15 54.9 0.2 8.8e-15 54.6 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 ORF95232 - 6.1e-08 32.4 0.3 1.8e-07 30.9 0.3 1.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF95232 - 7.8e-07 28.7 0.3 1.1e-06 28.2 0.3 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region G-alpha PF00503.20 ORF95232 - 0.00016 21.0 4.7 0.17 11.0 0.0 2.5 2 1 0 2 2 2 2 G-protein alpha subunit AAA_24 PF13479.6 ORF95232 - 0.0071 16.1 0.7 0.046 13.4 0.4 2.4 1 1 1 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 ORF95232 - 0.0089 16.1 0.0 0.017 15.2 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF95232 - 0.014 14.9 0.0 0.056 13.0 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region SRPRB PF09439.10 ORF95232 - 0.015 14.7 0.5 0.082 12.3 0.1 2.0 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 ORF95232 - 0.027 14.7 0.1 0.06 13.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF95232 - 0.078 12.7 0.4 4.2 7.1 0.1 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Sigma54_activat PF00158.26 ORF95232 - 0.15 11.8 0.0 0.34 10.6 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain Abhydrolase_1 PF00561.20 ORF88898 - 3.7e-32 112.0 0.0 4.3e-32 111.8 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF88898 - 8.8e-16 59.2 4.1 1.1e-15 58.9 4.1 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF88898 - 9e-11 41.5 0.0 1.5e-10 40.8 0.0 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 ORF88898 - 6.5e-06 26.4 0.0 7.6e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_5 PF12695.7 ORF88898 - 6.6e-05 22.7 0.0 0.0022 17.8 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase family Ndr PF03096.14 ORF88898 - 0.0014 17.4 0.0 0.0018 17.0 0.0 1.2 1 0 0 1 1 1 1 Ndr family Esterase PF00756.20 ORF88898 - 0.019 14.7 0.0 0.028 14.1 0.0 1.3 1 0 0 1 1 1 0 Putative esterase Peptidase_S9 PF00326.21 ORF88898 - 0.055 12.9 0.0 0.098 12.1 0.0 1.4 1 0 0 1 1 1 0 Prolyl oligopeptidase family UPF0227 PF05728.12 ORF88898 - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) PGAP1 PF07819.13 ORF88898 - 0.18 11.5 0.0 0.28 10.8 0.0 1.4 1 0 0 1 1 1 0 PGAP1-like protein Pkinase PF00069.25 ORF8792 - 4.5e-44 150.8 0.0 5.2e-44 150.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF8792 - 1.7e-33 116.0 0.0 1.9e-33 115.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF8792 - 2.2e-05 23.9 0.0 4.9e-05 22.8 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF8792 - 9.4e-05 21.4 0.0 0.00014 20.7 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF8792 - 0.036 14.0 0.1 0.061 13.2 0.1 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 ORF8792 - 0.076 12.0 0.1 0.12 11.4 0.1 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 ATP-synt_B PF00430.18 ORF84353 - 2.1e-08 34.3 18.9 1.9e-07 31.2 18.9 2.1 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) EI24 PF07264.11 ORF84353 - 0.0046 17.2 0.2 0.0065 16.7 0.2 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) V-ATPase_G PF03179.15 ORF84353 - 0.0099 16.4 14.1 0.017 15.7 14.1 1.3 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit DUF3054 PF11255.8 ORF84353 - 0.057 13.9 3.4 0.099 13.2 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3054) Transmemb_17 PF09799.9 ORF798 - 0.03 14.9 0.1 0.086 13.4 0.1 1.7 1 0 0 1 1 1 0 Predicted membrane protein CEP19 PF14933.6 ORF78585 - 2.1e-22 80.2 15.9 2.1e-22 80.2 15.9 2.3 2 1 0 2 2 2 1 CEP19-like protein YdiH PF15930.5 ORF71297 - 5.8e-42 141.7 0.7 8.4e-42 141.1 0.7 1.3 1 0 0 1 1 1 1 Domain of unknown function 4HBT PF03061.22 ORF71297 - 3e-15 56.3 0.2 5.9e-15 55.4 0.2 1.5 1 0 0 1 1 1 1 Thioesterase superfamily Jas PF16135.5 ORF71297 - 0.11 12.7 4.5 2.6 8.3 3.1 2.6 2 1 0 2 2 2 0 TPL-binding domain in jasmonate signalling DUF1499 PF07386.11 ORF70434 - 2.2e-08 34.7 0.0 5.2e-08 33.5 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1499) 7TM_GPCR_Srw PF10324.9 ORF70434 - 0.0034 16.7 1.3 0.0067 15.8 0.3 1.9 2 0 0 2 2 2 1 Serpentine type 7TM GPCR chemoreceptor Srw PEP-utilizers_C PF02896.18 ORF70434 - 0.1 11.7 0.1 0.15 11.2 0.1 1.2 1 0 0 1 1 1 0 PEP-utilising enzyme, TIM barrel domain Adeno_PV PF03910.13 ORF69982 - 7.5 5.2 7.5 12 4.5 7.5 1.3 1 0 0 1 1 1 0 Adenovirus minor core protein PV Chitin_synth_1 PF01644.17 ORF69714 - 7.1e-08 32.6 0.2 1e-07 32.1 0.2 1.2 1 0 0 1 1 1 1 Chitin synthase LEM PF03020.15 ORF69714 - 0.65 9.6 2.4 8.8 6.0 0.2 2.5 2 0 0 2 2 2 0 LEM domain Methyltransf_21 PF05050.12 ORF69106 - 0.082 12.9 0.0 0.81 9.7 0.0 2.1 1 1 1 2 2 2 0 Methyltransferase FkbM domain Lyase_1 PF00206.20 ORF64787 - 0.081 12.3 0.7 0.12 11.8 0.7 1.2 1 0 0 1 1 1 0 Lyase DnaJ_C PF01556.18 ORF54102 - 1.1e-45 155.3 0.0 1.3e-45 155.1 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.19 ORF54102 - 1.9e-16 60.2 17.0 3.4e-16 59.4 17.0 1.4 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 ORF54102 - 1.3e-06 28.3 14.6 8.4e-05 22.5 3.2 3.1 1 1 3 4 4 4 4 Tryptophan RNA-binding attenuator protein inhibitory protein Cytochrome_C7 PF14522.6 ORF54102 - 0.013 15.4 10.7 3.6 7.6 10.9 2.5 1 1 0 1 1 1 0 Cytochrome c7 and related cytochrome c DUF5351 PF17302.2 ORF54102 - 0.026 14.7 18.7 1.3 9.3 0.7 4.6 4 0 0 4 4 4 0 Family of unknown function (DUF5351) Lar_restr_allev PF14354.6 ORF54102 - 0.21 12.0 13.4 0.6 10.5 0.2 4.1 1 1 3 4 4 4 0 Restriction alleviation protein Lar TackOD1 PF18551.1 ORF54102 - 0.25 11.0 6.4 0.47 10.1 1.4 2.2 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 zinc_ribbon_9 PF14369.6 ORF54102 - 0.38 11.1 9.1 8 6.8 0.1 3.5 3 1 0 3 3 3 0 zinc-ribbon Cytochrom_c3_2 PF14537.6 ORF54102 - 0.55 10.7 10.8 1.7 9.1 10.8 1.9 1 1 0 1 1 1 0 Cytochrome c3 HypA PF01155.19 ORF54102 - 0.76 9.8 10.7 2.3 8.3 1.6 2.2 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 7tm_3 PF00003.22 ORF51720 - 0.0072 16.1 0.3 0.0084 15.9 0.3 1.1 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR MscS_TM PF12794.7 ORF51720 - 0.014 14.3 0.2 0.021 13.7 0.2 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 CttA_N PF18244.1 ORF51720 - 0.016 15.6 0.0 0.032 14.7 0.0 1.5 1 0 0 1 1 1 0 Cellulose-binding protein CttA N-terminal domain DUF2207 PF09972.9 ORF51720 - 0.081 11.7 0.1 0.1 11.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MARVEL PF01284.23 ORF51720 - 0.16 12.0 3.8 0.23 11.5 3.8 1.2 1 0 0 1 1 1 0 Membrane-associating domain DUF4239 PF14023.6 ORF51720 - 0.2 11.4 0.4 0.3 10.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF2273 PF10031.9 ORF51720 - 9.4 6.3 8.5 0.78 9.8 0.4 2.2 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) Herpes_UL49_5 PF05702.11 ORF51535 - 0.055 13.6 0.3 0.11 12.5 0.3 1.4 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein DUF2391 PF09622.10 ORF50886 - 0.016 14.5 0.8 0.021 14.1 0.2 1.4 2 0 0 2 2 2 0 Putative integral membrane protein (DUF2391) adh_short PF00106.25 ORF482 - 2.8e-43 147.7 3.6 3.7e-43 147.3 3.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF482 - 1.5e-37 129.4 0.8 1.8e-37 129.2 0.8 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF482 - 1.5e-06 28.2 4.2 1.1e-05 25.4 4.2 2.1 1 1 0 1 1 1 1 KR domain 3Beta_HSD PF01073.19 ORF482 - 1.2e-05 24.5 2.3 1.7e-05 24.0 2.3 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF482 - 0.0021 17.6 0.8 0.0034 16.9 0.6 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 ORF482 - 0.019 14.4 0.4 0.029 13.8 0.4 1.3 1 0 0 1 1 1 0 GDP-mannose 4,6 dehydratase Tex_YqgF PF16921.5 ORF482 - 0.032 14.7 0.9 0.055 13.9 0.9 1.3 1 0 0 1 1 1 0 Tex protein YqgF-like domain Sacchrp_dh_NADP PF03435.18 ORF482 - 0.091 13.0 0.7 0.19 12.0 0.5 1.7 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Glutaredoxin PF00462.24 ORF482 - 0.2 11.9 0.4 4.1 7.7 0.1 2.8 2 1 1 3 3 3 0 Glutaredoxin MukF_C PF17193.4 ORF482 - 0.21 11.7 1.3 3.5 7.8 0.3 2.1 1 1 0 2 2 2 0 MukF C-terminal domain UPF0016 PF01169.19 ORF46756 - 6.6e-29 100.1 16.9 2.3e-16 59.9 5.0 2.1 2 0 0 2 2 2 2 Uncharacterized protein family UPF0016 Mem_trans PF03547.18 ORF46756 - 0.01 14.3 1.7 0.015 13.7 1.7 1.3 1 0 0 1 1 1 0 Membrane transport protein TRIQK PF15168.6 ORF46756 - 3 7.8 5.3 9.9 6.1 0.1 2.7 3 0 0 3 3 3 0 Triple QxxK/R motif-containing protein family Pox_A9 PF04835.12 ORF46756 - 3.4 7.9 6.8 3.4 7.9 0.1 2.9 2 0 0 2 2 2 0 A9 protein conserved region DUF5373 PF17343.2 ORF46756 - 5.3 6.9 10.9 3.7 7.4 2.4 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5373) Tup_N PF08581.10 ORF41836 - 3.1 8.2 19.2 0.27 11.5 2.9 3.3 2 2 2 4 4 4 0 Tup N-terminal Lactamase_B_2 PF12706.7 ORF34464 - 9e-21 74.3 0.0 1.2e-20 73.9 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 ORF34464 - 7.2e-20 71.5 0.0 1.1e-19 71.0 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 ORF34464 - 1.2e-06 28.7 0.3 0.00099 19.2 0.0 2.1 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily ELMO_CED12 PF04727.13 ORF33481 - 1.9e-28 99.8 0.8 2.8e-28 99.2 0.1 1.6 1 1 1 2 2 2 1 ELMO/CED-12 family Tnp_22_trimer PF17489.2 ORF33481 - 0.038 14.0 0.4 0.1 12.6 0.4 1.7 1 0 0 1 1 1 0 L1 transposable element trimerization domain tRNA_NucTran2_2 PF13735.6 ORF29018 - 0.024 14.6 0.3 0.024 14.6 0.3 1.9 2 0 0 2 2 2 0 tRNA nucleotidyltransferase domain 2 putative NAPRTase_N PF17767.1 ORF29018 - 0.084 13.3 4.0 1 9.8 0.2 3.1 2 1 1 3 3 3 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GST_N_3 PF13417.6 ORF25646 - 1.7e-08 34.7 0.0 2.8e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF25646 - 6.8e-07 29.5 0.0 1.2e-06 28.8 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF25646 - 0.00011 22.5 0.0 0.0002 21.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF25646 - 0.001 19.1 0.0 0.0016 18.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF25646 - 0.0018 18.4 0.7 0.0035 17.5 0.0 1.9 2 0 0 2 2 2 1 Glutaredoxin GST_N_4 PF17172.4 ORF25646 - 0.0022 18.7 0.0 0.0041 17.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain Myosin_TH1 PF06017.13 ORF23852 - 1.4e-13 50.9 0.9 1.9e-13 50.5 0.9 1.2 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding PH_3 PF14593.6 ORF23852 - 0.0058 16.7 1.1 0.01 15.9 1.1 1.5 1 0 0 1 1 1 1 PH domain XdhC_CoxI PF02625.16 ORF22138 - 8.7 6.6 9.1 26 5.1 0.1 2.7 3 0 0 3 3 3 0 XdhC and CoxI family zf-C2H2 PF00096.26 ORF1838 - 1.3e-13 50.5 21.3 2e-05 24.8 1.3 4.3 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF1838 - 3.9e-10 39.7 15.0 0.0023 18.6 0.8 4.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF1838 - 5.6e-06 26.6 14.1 0.00061 20.1 1.2 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF1838 - 4.2e-05 23.2 2.3 4.2e-05 23.2 2.3 3.0 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF1838 - 0.0029 17.9 9.9 0.0094 16.2 1.8 2.5 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF1838 - 0.013 15.8 0.8 0.013 15.8 0.8 4.1 4 1 0 4 4 4 0 Zinc-finger of C2H2 type HNH_5 PF14279.6 ORF1838 - 0.013 15.3 2.6 0.013 15.3 2.6 2.9 3 0 0 3 3 3 0 HNH endonuclease zf-C2H2_jaz PF12171.8 ORF1838 - 0.018 15.3 1.9 0.018 15.3 1.9 3.5 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 ORF1838 - 0.069 12.9 0.3 0.069 12.9 0.3 2.7 3 0 0 3 3 3 0 zinc-finger C2H2-type Mut7-C PF01927.16 ORF1838 - 0.12 12.4 4.9 0.2 11.8 4.9 1.6 1 1 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.10 ORF1838 - 0.25 11.5 6.4 0.96 9.6 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zf-C2H2_6 PF13912.6 ORF1838 - 0.44 10.6 14.1 0.34 11.0 0.7 3.1 3 0 0 3 3 3 0 C2H2-type zinc finger zf-AN1 PF01428.16 ORF1838 - 1.3 9.2 8.4 7 6.9 0.3 3.6 3 0 0 3 3 3 0 AN1-like Zinc finger zf-C2H2_2 PF12756.7 ORF1838 - 6.3 7.2 19.4 3.1 8.2 9.9 3.7 2 2 1 3 3 3 0 C2H2 type zinc-finger (2 copies) PyrI_C PF02748.15 ORF1838 - 6.5 6.7 9.7 5.7 6.9 0.6 3.4 4 0 0 4 4 4 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Glycos_transf_1 PF00534.20 ORF17025 - 1.1e-32 112.9 0.1 3.4e-32 111.3 0.0 1.7 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF17025 - 1e-20 74.5 0.0 1.8e-20 73.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Ribosomal_L31e PF01198.19 ORF1532 - 0.14 12.4 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L31e MFS_1 PF07690.16 ORF152920 - 9.3e-14 51.1 8.3 1.3e-13 50.6 8.3 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily LRR19-TM PF15176.6 ORF149895 - 0.038 14.0 0.0 0.078 13.0 0.0 1.5 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain FAM176 PF14851.6 ORF149895 - 0.2 11.3 0.7 0.36 10.5 0.7 1.3 1 0 0 1 1 1 0 FAM176 family zf-C2H2 PF00096.26 ORF149271 - 6.2e-18 64.2 16.9 3.3e-06 27.2 2.4 4.1 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF149271 - 4.7e-11 42.5 15.9 0.00081 20.0 1.4 4.2 4 0 0 4 4 4 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF149271 - 1.3e-07 31.7 8.3 0.0001 22.6 0.3 3.5 4 0 0 4 4 4 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF149271 - 1.2e-06 28.1 3.1 1.2e-06 28.1 3.1 3.4 3 1 0 3 3 3 1 C2H2-type zinc-finger domain zf-C2H2_8 PF15909.5 ORF149271 - 1.9e-05 24.9 9.6 0.00039 20.7 0.5 2.6 1 1 1 2 2 2 2 C2H2-type zinc ribbon zf-met PF12874.7 ORF149271 - 0.013 15.8 0.8 0.013 15.8 0.8 4.4 5 1 0 5 5 5 0 Zinc-finger of C2H2 type zf-C2H2_11 PF16622.5 ORF149271 - 0.015 15.0 0.2 0.015 15.0 0.2 2.8 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-C2H2_jaz PF12171.8 ORF149271 - 0.018 15.3 1.9 0.018 15.3 1.9 3.7 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 ORF149271 - 0.019 14.9 14.2 0.25 11.4 2.7 3.1 3 0 0 3 3 2 0 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 ORF149271 - 0.045 13.9 3.3 0.96 9.6 0.2 2.9 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2H2_2 PF12756.7 ORF149271 - 0.33 11.3 19.0 0.47 10.8 5.0 3.8 2 1 1 3 3 3 0 C2H2 type zinc-finger (2 copies) Mut7-C PF01927.16 ORF149271 - 0.4 10.8 6.0 0.11 12.5 2.2 1.8 2 1 0 2 2 2 0 Mut7-C RNAse domain zf-BED PF02892.15 ORF149271 - 0.89 9.6 10.1 8.4 6.5 0.9 2.8 1 1 1 2 2 2 0 BED zinc finger PyrI_C PF02748.15 ORF149271 - 4.5 7.3 8.4 8.1 6.4 0.3 3.0 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zinc_ribbon_15 PF17032.5 ORF149271 - 7.6 7.4 11.2 0.55 11.0 5.1 2.2 2 1 0 2 2 2 0 zinc-ribbon family ESM4 PF15952.5 ORF145065 - 0.19 12.1 7.0 0.37 11.2 7.0 1.4 1 0 0 1 1 1 0 Enhancer of split M4 family Hydin_ADK PF17213.3 ORF145065 - 0.33 11.2 3.9 0.49 10.7 3.9 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain V_ATPase_I PF01496.19 ORF145065 - 2.4 6.0 11.4 3.1 5.6 11.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4184 PF13803.6 ORF144180 - 0.35 10.6 6.3 0.81 9.4 6.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4184) OAD_gamma PF04277.13 ORF141041 - 0.017 15.7 1.6 0.13 12.9 0.0 2.6 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain DUF3043 PF11241.8 ORF141041 - 0.036 14.1 0.1 7 6.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3043) DUF5535 PF17687.1 ORF141041 - 0.11 12.6 0.4 6.4 7.0 0.1 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5535) 7tm_3 PF00003.22 ORF140306 - 0.0072 16.1 0.3 0.0084 15.9 0.3 1.1 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR MscS_TM PF12794.7 ORF140306 - 0.014 14.3 0.2 0.021 13.7 0.2 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 CttA_N PF18244.1 ORF140306 - 0.016 15.6 0.0 0.032 14.7 0.0 1.5 1 0 0 1 1 1 0 Cellulose-binding protein CttA N-terminal domain DUF2207 PF09972.9 ORF140306 - 0.081 11.7 0.1 0.1 11.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MARVEL PF01284.23 ORF140306 - 0.16 12.0 3.8 0.23 11.5 3.8 1.2 1 0 0 1 1 1 0 Membrane-associating domain DUF4239 PF14023.6 ORF140306 - 0.2 11.4 0.4 0.3 10.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4239) DUF2273 PF10031.9 ORF140306 - 9.4 6.3 8.5 0.78 9.8 0.4 2.2 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) Lactamase_B_2 PF12706.7 ORF138329 - 9e-21 74.3 0.0 1.2e-20 73.9 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 ORF138329 - 7.2e-20 71.5 0.0 1.1e-19 71.0 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 ORF138329 - 1.2e-06 28.7 0.3 0.00099 19.2 0.0 2.1 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Furin-like_2 PF15913.5 ORF13212 - 0.015 15.4 3.4 0.015 15.4 3.4 2.0 1 1 1 2 2 2 0 Furin-like repeat, cysteine-rich CLIP PF12032.8 ORF129616 - 0.064 13.6 0.9 4.6 7.6 1.0 2.9 2 1 0 2 2 2 0 Regulatory CLIP domain of proteinases HpcH_HpaI PF03328.14 ORF120884 - 1.6e-62 210.6 0.0 1.8e-62 210.4 0.0 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family PK PF00224.21 ORF120884 - 8.7e-05 21.6 0.0 0.00011 21.2 0.0 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain Catalase_C PF18011.1 ORF120884 - 0.028 14.0 0.3 0.04 13.5 0.3 1.2 1 0 0 1 1 1 0 C-terminal domain found in long catalases zf-C2H2 PF00096.26 ORF117839 - 1.9e-13 50.0 20.4 2e-05 24.8 1.3 4.3 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF117839 - 2.4e-09 37.2 14.1 0.0023 18.6 0.8 4.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF117839 - 3.8e-08 33.4 6.2 0.00061 20.1 1.2 3.1 2 0 0 2 2 2 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF117839 - 4.2e-05 23.2 2.3 4.2e-05 23.2 2.3 3.1 3 1 0 3 3 3 1 C2H2-type zinc-finger domain HNH_5 PF14279.6 ORF117839 - 0.00083 19.2 3.3 0.00083 19.2 3.3 2.9 3 0 0 3 3 3 1 HNH endonuclease zf-C2H2_8 PF15909.5 ORF117839 - 0.005 17.1 1.4 0.005 17.1 1.4 2.3 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 ORF117839 - 0.069 12.9 0.3 0.069 12.9 0.3 2.7 3 0 0 3 3 3 0 zinc-finger C2H2-type Mut7-C PF01927.16 ORF117839 - 0.097 12.8 4.5 0.16 12.1 4.4 1.6 1 1 0 1 1 1 0 Mut7-C RNAse domain zf-met PF12874.7 ORF117839 - 0.25 11.8 0.4 0.25 11.8 0.4 4.1 4 1 0 4 4 4 0 Zinc-finger of C2H2 type Zn-ribbon_8 PF09723.10 ORF117839 - 0.32 11.1 6.4 1.3 9.2 0.2 3.0 3 0 0 3 3 2 0 Zinc ribbon domain zf-AN1 PF01428.16 ORF117839 - 0.63 10.3 7.2 7 6.9 0.3 3.6 3 0 0 3 3 3 0 AN1-like Zinc finger zf_ZIC PF18366.1 ORF117839 - 1.2 9.3 3.3 34 4.7 0.1 2.9 3 0 0 3 3 3 0 Zic proteins zinc finger domain Endonuclease_7 PF02945.15 ORF117839 - 2.2 8.3 9.2 0.69 9.9 4.7 2.5 2 1 0 2 2 2 0 Recombination endonuclease VII zf-C2HE PF16278.5 ORF117839 - 3.8 8.0 6.9 13 6.4 1.2 2.8 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_jaz PF12171.8 ORF117839 - 5.3 7.5 12.0 0.96 9.8 1.3 3.5 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding DUF4184 PF13803.6 ORF114533 - 0.35 10.6 6.3 0.81 9.4 6.3 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4184) TOPRIM_C PF16898.5 ORF113621 - 0.35 11.1 4.8 4.7 7.5 0.0 3.1 3 1 0 3 3 3 0 C-terminal associated domain of TOPRIM SepSecS PF05889.13 ORF111889 - 5.9e-67 226.0 0.2 6.9e-67 225.8 0.2 1.0 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Gly-rich_Ago1 PF12764.7 ORF10538 - 0.2 12.4 2.5 0.16 12.7 0.9 1.7 2 0 0 2 2 2 0 Glycine-rich region of argonaut Gasdermin_C PF17708.1 NODE_28192_length_764_cov_411.165981_g2123_i1forward_frame_1 - 0.016 15.3 1.7 0.023 14.8 1.7 1.1 1 0 0 1 1 1 0 Gasdermin PUB domain GCD14 PF08704.10 NODE_28192_length_764_cov_411.165981_g2123_i1forward_frame_1 - 0.91 9.1 2.7 1 9.0 1.2 1.7 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit Chordopox_RPO7 PF05864.12 NODE_28169_length_765_cov_99.484932_g22152_i0reverse_frame_1 - 0.0025 18.0 0.7 0.84 9.9 0.0 2.5 1 1 1 2 2 2 2 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) WGR PF05406.15 NODE_28169_length_765_cov_99.484932_g22152_i0forward_frame_1 - 9.9e-08 31.9 0.7 2.2e-07 30.8 0.7 1.6 1 0 0 1 1 1 1 WGR domain DUF4413 PF14372.6 NODE_28169_length_765_cov_99.484932_g22152_i0forward_frame_1 - 0.18 12.2 0.0 0.32 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4413) Destabilase PF05497.12 NODE_28169_length_765_cov_99.484932_g22152_i0forward_frame_1 - 1.2 9.5 5.6 6.8 7.1 0.1 3.0 2 1 0 3 3 3 0 Destabilase MipA PF06629.12 NODE_28102_length_767_cov_2.426230_g22093_i0reverse_frame_2 - 5.8e-38 131.3 11.3 6.7e-38 131.1 11.3 1.0 1 0 0 1 1 1 1 MltA-interacting protein MipA PPR_2 PF13041.6 NODE_28092_length_767_cov_82.125683_g22083_i0reverse_frame_3 - 3.3e-05 24.0 0.0 0.064 13.5 0.0 4.0 4 1 1 5 5 5 2 PPR repeat family MutS_III PF05192.18 NODE_28079_length_767_cov_138.956284_g22073_i0reverse_frame_3 - 8.4e-28 97.9 0.8 1.3e-27 97.3 0.8 1.3 1 0 0 1 1 1 1 MutS domain III MutS_II PF05188.17 NODE_28079_length_767_cov_138.956284_g22073_i0reverse_frame_3 - 0.0055 17.0 0.5 0.12 12.6 0.0 2.8 2 1 0 2 2 2 1 MutS domain II Cdc13_OB2 PF18691.1 NODE_28079_length_767_cov_138.956284_g22073_i0reverse_frame_3 - 0.014 15.4 1.9 0.025 14.7 1.9 1.4 1 0 0 1 1 1 0 Cell division control protein 13, OB2 domain ATP_bind_1 PF03029.17 NODE_28078_length_767_cov_143.106557_g22072_i0forward_frame_2 - 1.9e-45 155.5 0.4 2.4e-45 155.2 0.4 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein RelB_N PF18506.1 NODE_28078_length_767_cov_143.106557_g22072_i0forward_frame_2 - 0.072 12.9 0.1 0.2 11.5 0.1 1.7 1 0 0 1 1 1 0 RelB Antitoxin alpha helical domain MAAL_C PF07476.11 NODE_28078_length_767_cov_143.106557_g22072_i0forward_frame_2 - 0.15 11.2 0.1 0.86 8.7 0.0 2.2 1 1 0 2 2 2 0 Methylaspartate ammonia-lyase C-terminus Ank_4 PF13637.6 NODE_28055_length_767_cov_15284.871585_g18113_i13forward_frame_3 - 1.9e-18 66.6 0.1 1.2e-11 44.9 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 NODE_28055_length_767_cov_15284.871585_g18113_i13forward_frame_3 - 4.9e-15 55.9 0.0 1.2e-14 54.7 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_28055_length_767_cov_15284.871585_g18113_i13forward_frame_3 - 3.4e-13 49.5 0.0 1.8e-10 40.9 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 NODE_28055_length_767_cov_15284.871585_g18113_i13forward_frame_3 - 8.4e-13 47.3 0.0 1.6e-06 28.0 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 NODE_28055_length_767_cov_15284.871585_g18113_i13forward_frame_3 - 3.7e-10 39.8 0.0 4.9e-06 26.7 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 NODE_28055_length_767_cov_15284.871585_g18113_i13forward_frame_3 - 0.032 14.4 0.3 0.063 13.5 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Topoisom_bac PF01131.20 ORF94429 - 2.9e-29 102.3 0.3 3.7e-29 102.0 0.3 1.1 1 0 0 1 1 1 1 DNA topoisomerase KN_motif PF12075.8 ORF94429 - 0.092 12.6 0.1 0.23 11.3 0.1 1.7 1 0 0 1 1 1 0 KN motif Endonuc_subdom PF09062.10 ORF94429 - 0.21 12.4 2.4 0.5 11.2 1.9 1.9 1 1 0 1 1 1 0 PI-PfuI Endonuclease subdomain Nuc_sug_transp PF04142.15 ORF94031 - 1.4e-18 67.1 14.1 2e-18 66.6 14.1 1.2 1 0 0 1 1 1 1 Nucleotide-sugar transporter UAA PF08449.11 ORF94031 - 0.00017 20.9 7.1 0.00034 19.9 7.1 1.6 1 1 0 1 1 1 1 UAA transporter family DUF423 PF04241.15 ORF94031 - 1.4 9.2 5.8 0.3 11.3 0.3 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF423) zf-RING_2 PF13639.6 ORF93794 - 1.8e-09 37.7 13.8 3.5e-09 36.9 13.8 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF93794 - 8.3e-08 32.0 15.7 1.3e-07 31.4 15.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF93794 - 2.2e-06 27.4 15.1 4.1e-06 26.5 15.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF93794 - 2e-05 24.3 12.8 5e-05 23.1 12.8 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF93794 - 2.3e-05 24.1 14.1 4.5e-05 23.2 14.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF93794 - 0.00065 19.9 10.0 0.0014 18.9 10.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 ORF93794 - 0.00082 19.5 12.1 0.002 18.2 12.1 1.6 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-RING_5 PF14634.6 ORF93794 - 0.0012 18.8 16.2 0.0025 17.7 16.2 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Baculo_RING PF05883.11 ORF93794 - 0.0037 17.2 5.5 0.0095 15.9 5.5 1.8 1 1 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4_4 PF15227.6 ORF93794 - 0.016 15.4 10.6 0.041 14.0 10.6 1.7 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF93794 - 0.02 14.9 8.3 0.045 13.8 8.3 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_4 PF14570.6 ORF93794 - 0.028 14.2 16.0 0.062 13.1 16.0 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Pro_CA PF00484.19 ORF93794 - 0.096 13.0 3.3 0.099 12.9 0.8 1.9 1 1 1 2 2 2 0 Carbonic anhydrase zf-C3HC4_5 PF17121.5 ORF93794 - 1.7 8.6 11.5 6.2 6.8 11.5 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Band_7 PF01145.25 ORF92678 - 1.1e-17 64.6 0.0 1.5e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 ORF92678 - 0.00018 21.3 0.2 0.00028 20.7 0.2 1.3 1 0 0 1 1 1 1 SPFH domain-Band 7 family ABC_tran PF00005.27 ORF92156 - 1.8e-33 115.9 0.0 2.6e-33 115.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF92156 - 4e-12 46.6 0.3 2.7e-05 24.1 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF92156 - 2.4e-09 37.0 0.0 0.00062 19.3 0.0 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF92156 - 6.8e-07 28.9 0.1 1.5e-06 27.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF92156 - 8.6e-06 25.7 0.0 0.00029 20.7 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 ORF92156 - 2.3e-05 25.0 0.1 3.4e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF92156 - 4.2e-05 24.0 0.0 7.6e-05 23.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF92156 - 0.00028 20.8 0.1 0.0006 19.8 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 ORF92156 - 0.0021 18.1 0.1 0.054 13.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF92156 - 0.0035 17.6 0.1 0.015 15.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF92156 - 0.007 16.0 0.3 0.025 14.1 0.0 1.9 1 1 0 2 2 2 1 AAA domain ThiS PF02597.20 ORF92156 - 0.0073 16.9 0.1 1.9 9.2 0.0 2.6 2 1 0 2 2 2 1 ThiS family Rad17 PF03215.15 ORF92156 - 0.0087 16.0 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_14 PF13173.6 ORF92156 - 0.0095 16.0 0.0 0.11 12.6 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_27 PF13514.6 ORF92156 - 0.01 15.4 0.0 0.061 12.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain Adeno_IVa2 PF02456.15 ORF92156 - 0.027 13.3 0.2 0.054 12.3 0.0 1.5 2 0 0 2 2 2 0 Adenovirus IVa2 protein DUF2813 PF11398.8 ORF92156 - 0.043 13.1 0.1 0.1 11.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) AAA_33 PF13671.6 ORF92156 - 0.064 13.4 0.3 0.52 10.5 0.2 2.3 1 1 1 2 2 2 0 AAA domain Mg_chelatase PF01078.21 ORF92156 - 0.073 12.4 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MukB PF04310.12 ORF92156 - 0.076 12.8 0.2 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 MukB N-terminal AAA_28 PF13521.6 ORF92156 - 0.094 13.0 0.0 0.28 11.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF92156 - 0.14 12.6 0.0 0.33 11.3 0.0 1.6 2 0 0 2 2 1 0 RNA helicase NACHT PF05729.12 ORF92156 - 0.14 12.0 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ABC_ATPase PF09818.9 ORF92156 - 0.15 10.9 0.1 0.68 8.7 0.0 1.8 2 0 0 2 2 2 0 Predicted ATPase of the ABC class ATPase_2 PF01637.18 ORF92156 - 0.16 11.9 0.0 0.61 10.0 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Glycos_transf_1 PF00534.20 ORF91574 - 4e-21 75.3 0.0 7e-21 74.5 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF91574 - 1.6e-16 60.9 0.0 2.9e-16 60.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF91574 - 0.00014 22.1 0.0 0.00028 21.2 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 ECM11 PF15463.6 ORF91574 - 0.01 16.4 0.2 0.015 15.9 0.2 1.2 1 0 0 1 1 1 0 Extracellular mutant protein 11 ATP-synt_D PF01813.17 ORF90354 - 4.8e-61 206.0 1.5 6.6e-61 205.6 1.5 1.2 1 0 0 1 1 1 1 ATP synthase subunit D DUF4910 PF16254.5 ORF90354 - 0.16 10.8 0.0 0.23 10.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4910) DUF5362 PF17319.2 ORF87416 - 0.0025 17.6 2.1 0.54 10.1 0.1 2.5 2 0 0 2 2 2 2 Family of unknown function (DUF5362) VirB3 PF05101.13 ORF87416 - 0.18 12.1 6.5 0.14 12.5 1.1 2.3 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein XRCC1_N PF01834.16 ORF86352 - 0.01 15.8 0.5 0.021 14.9 0.1 1.8 2 0 0 2 2 2 0 XRCC1 N terminal domain PnpCD_PnpD_N PF18191.1 ORF86352 - 0.12 12.0 0.0 0.36 10.4 0.0 1.7 1 1 1 2 2 2 0 Hydroquinone 1,2-dioxygenase large subunit N-terminal EAL PF00563.20 ORF85731 - 5.3e-30 104.7 0.0 7.1e-30 104.3 0.0 1.1 1 0 0 1 1 1 1 EAL domain Arena_glycoprot PF00798.18 ORF85125 - 0.59 8.7 3.4 0.22 10.2 1.0 1.4 1 1 1 2 2 2 0 Arenavirus glycoprotein PTSIIB_sorb PF03830.15 ORF82100 - 1.1e-49 168.5 0.1 1.3e-49 168.2 0.1 1.1 1 0 0 1 1 1 1 PTS system sorbose subfamily IIB component DUF1652 PF07865.11 ORF80595 - 0.039 13.8 0.0 0.07 13.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) HypA PF01155.19 ORF80595 - 3.7 7.6 16.5 13 5.8 0.0 3.2 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C2 PF00168.30 ORF80114 - 1.1e-13 51.3 0.1 1.5e-13 50.9 0.1 1.2 1 0 0 1 1 1 1 C2 domain CARD_2 PF16739.5 ORF79099 - 0.04 13.9 0.2 0.36 10.8 0.2 2.4 2 1 0 2 2 2 0 Caspase recruitment domain Neurensin PF14927.6 ORF78999 - 0.072 12.8 0.8 0.072 12.8 0.8 2.4 3 0 0 3 3 3 0 Neurensin BshC PF10079.9 ORF78036 - 3.2 6.4 8.4 3.5 6.2 0.2 2.0 2 0 0 2 2 2 0 Bacillithiol biosynthesis BshC Stevor PF17410.2 ORF78036 - 6.4 6.2 11.3 0.13 11.8 0.9 2.1 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame Kelch_1 PF01344.25 ORF7158 - 2.2e-15 56.0 7.5 4.4e-09 35.8 0.1 4.5 4 1 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 ORF7158 - 5.6e-14 51.8 3.2 4.8e-05 23.5 0.0 3.7 4 0 0 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF7158 - 5e-13 49.0 0.1 8.8e-05 22.7 0.0 3.5 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_4 PF13418.6 ORF7158 - 2.1e-08 34.1 4.8 0.0018 18.2 0.0 4.1 4 1 1 5 5 5 3 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF7158 - 0.017 15.1 0.3 3.7 7.7 0.0 3.3 4 0 0 4 4 4 0 Kelch motif Kelch_5 PF13854.6 ORF7158 - 0.2 11.7 2.3 1.5 8.9 0.0 2.9 3 0 0 3 3 3 0 Kelch motif Usher PF00577.20 ORF71384 - 2.7e-42 145.4 3.3 3.2e-42 145.1 3.3 1.0 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF71384 - 1.5e-12 47.1 0.0 3.3e-11 42.8 0.0 2.3 2 0 0 2 2 2 1 PapC C-terminal domain LRR_6 PF13516.6 ORF71168 - 9.6e-19 65.8 11.0 1.5e-05 24.7 0.1 5.3 5 0 0 5 5 5 4 Leucine Rich repeat LRR_1 PF00560.33 ORF71168 - 0.00084 19.6 0.2 24 6.0 0.0 5.1 5 2 0 5 5 5 1 Leucine Rich Repeat HOASN PF14515.6 ORF71168 - 0.0014 19.0 2.4 3.4 8.1 0.1 4.0 1 1 4 5 5 5 2 Haem-oxygenase-associated N-terminal helices SpoU_sub_bind PF08032.12 ORF71168 - 0.091 13.1 0.1 12 6.3 0.0 3.1 2 1 2 4 4 4 0 RNA 2'-O ribose methyltransferase substrate binding FAM25 PF15825.5 ORF71168 - 0.27 11.6 1.7 16 6.0 0.0 3.6 4 0 0 4 4 4 0 FAM25 family LRR_8 PF13855.6 ORF71168 - 1.3 8.9 4.5 17 5.3 0.6 3.9 1 1 3 4 4 4 0 Leucine rich repeat DUF1279 PF06916.13 ORF68238 - 4.9e-15 55.8 0.7 4.9e-15 55.8 0.7 2.5 3 0 0 3 3 3 1 Protein of unknown function (DUF1279) TPR_8 PF13181.6 ORF68114 - 0.033 14.4 0.6 0.19 12.1 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat LysR_substrate PF03466.20 ORF67458 - 0.034 13.5 0.1 0.089 12.1 0.0 1.7 2 0 0 2 2 2 0 LysR substrate binding domain DUF5362 PF17319.2 ORF64020 - 0.0025 17.6 2.1 0.54 10.1 0.1 2.5 2 0 0 2 2 2 2 Family of unknown function (DUF5362) VirB3 PF05101.13 ORF64020 - 0.18 12.1 6.5 0.14 12.5 1.1 2.3 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein MatE PF01554.18 ORF62692 - 2.6e-20 72.7 4.1 3.5e-20 72.3 4.1 1.3 1 0 0 1 1 1 1 MatE BshC PF10079.9 ORF62632 - 3.2 6.4 8.4 3.5 6.2 0.2 2.0 2 0 0 2 2 2 0 Bacillithiol biosynthesis BshC Stevor PF17410.2 ORF62632 - 6.4 6.2 11.3 0.13 11.8 0.9 2.1 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame Band_7 PF01145.25 ORF61068 - 1.1e-17 64.6 0.0 1.5e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 ORF61068 - 0.00018 21.3 0.2 0.00028 20.7 0.2 1.3 1 0 0 1 1 1 1 SPFH domain-Band 7 family DMT_6 PF04342.12 ORF6066 - 0.021 15.0 0.1 0.053 13.7 0.1 1.7 1 0 0 1 1 1 0 Putative member of DMT superfamily (DUF486) DUF3644 PF12358.8 ORF5740 - 0.94 10.0 4.6 0.98 10.0 1.8 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3644) ENOD93 PF03386.14 ORF5569 - 0.32 10.9 6.0 9.9 6.1 0.1 3.9 2 1 1 4 4 4 0 Early nodulin 93 ENOD93 protein EF-hand_1 PF00036.32 ORF55656 - 2.4e-10 39.2 8.3 1.1e-05 24.6 0.4 3.2 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF55656 - 2.6e-10 39.4 4.6 7.5e-05 22.4 0.3 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF55656 - 4.3e-10 38.6 3.5 0.00011 21.5 0.2 2.7 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF55656 - 2.7e-07 30.9 9.1 3.9e-05 24.0 2.0 2.9 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF55656 - 0.00051 19.8 3.6 0.21 11.5 0.3 2.8 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF55656 - 0.0096 15.9 3.0 2.2 8.3 0.2 2.5 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_10 PF14788.6 ORF55656 - 0.013 15.3 4.6 0.052 13.4 1.1 2.9 2 0 0 2 2 2 0 EF hand Nop14 PF04147.12 ORF55656 - 0.037 12.3 52.7 0.04 12.1 52.7 1.1 1 0 0 1 1 1 0 Nop14-like family ERGIC_N PF13850.6 ORF54469 - 0.035 14.5 1.2 0.055 13.8 0.2 1.9 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) cNMP_binding PF00027.29 ORF51608 - 1e-17 63.9 0.0 9e-14 51.3 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain DUF3490 PF11995.8 ORF51608 - 0.077 12.8 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3490) TIM PF00121.18 ORF51492 - 2.5e-93 312.0 0.4 2.8e-93 311.8 0.4 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase YjeF_N PF03853.15 ORF4882 - 2.8e-38 131.5 0.0 3.4e-38 131.2 0.0 1.1 1 0 0 1 1 1 1 YjeF-related protein N-terminus YjeF_N PF03853.15 ORF4858 - 6.8e-38 130.2 0.0 8.3e-38 130.0 0.0 1.1 1 0 0 1 1 1 1 YjeF-related protein N-terminus SlyX PF04102.12 ORF48440 - 0.11 13.1 0.3 0.42 11.3 0.0 2.0 2 0 0 2 2 2 0 SlyX T7SS_ESX_EspC PF10824.8 ORF48440 - 0.19 12.2 3.2 0.13 12.8 0.9 2.0 1 1 0 1 1 1 0 Excreted virulence factor EspC, type VII ESX diderm WXG100 PF06013.12 ORF48440 - 5.2 7.4 10.2 1.1 9.5 3.9 2.5 2 1 1 3 3 3 0 Proteins of 100 residues with WXG adh_short_C2 PF13561.6 ORF46016 - 7.3e-48 163.2 4.9 9.5e-48 162.8 4.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF46016 - 9.6e-48 162.2 5.0 1.2e-47 162.0 5.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF46016 - 3.7e-11 43.3 3.2 4.3e-10 39.8 3.2 2.1 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF46016 - 3.6e-05 23.4 1.2 6.9e-05 22.4 1.2 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF46016 - 0.0016 17.5 0.4 0.0023 17.0 0.4 1.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF46016 - 0.0061 16.0 0.3 0.018 14.5 0.1 1.8 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Sacchrp_dh_NADP PF03435.18 ORF46016 - 0.0085 16.3 0.6 0.015 15.5 0.6 1.4 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 ORF46016 - 0.017 15.2 0.0 0.033 14.2 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ADH_zinc_N PF00107.26 ORF46016 - 0.028 14.4 0.9 0.055 13.4 0.8 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 ORF46016 - 0.059 13.2 1.9 0.076 12.9 1.8 1.4 1 1 0 1 1 1 0 NAD(P)H-binding ABC_tran PF00005.27 ORF43810 - 5.6e-15 56.1 0.0 8.1e-15 55.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter T2SSE PF00437.20 ORF43810 - 0.0016 17.6 0.3 0.029 13.4 0.1 2.0 1 1 1 2 2 2 1 Type II/IV secretion system protein MMR_HSR1 PF01926.23 ORF43810 - 0.0076 16.3 0.2 0.013 15.6 0.2 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF87 PF01935.17 ORF43810 - 0.028 14.5 0.1 0.05 13.7 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Dynamin_N PF00350.23 ORF43810 - 0.029 14.5 0.1 0.056 13.5 0.1 1.4 1 0 0 1 1 1 0 Dynamin family RsgA_GTPase PF03193.16 ORF43810 - 0.045 13.6 0.3 0.071 13.0 0.3 1.2 1 0 0 1 1 1 0 RsgA GTPase FtsK_SpoIIIE PF01580.18 ORF43810 - 0.11 11.8 0.2 0.23 10.8 0.1 1.5 2 0 0 2 2 2 0 FtsK/SpoIIIE family ABC_tran PF00005.27 ORF4290 - 1.8e-33 115.9 0.0 2.6e-33 115.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF4290 - 4e-12 46.6 0.3 2.7e-05 24.1 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF4290 - 2.4e-09 37.0 0.0 0.00062 19.3 0.0 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF4290 - 6.8e-07 28.9 0.1 1.5e-06 27.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 ORF4290 - 8.6e-06 25.7 0.0 0.00029 20.7 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 ORF4290 - 2.3e-05 25.0 0.1 3.4e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF4290 - 4.2e-05 24.0 0.0 7.6e-05 23.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 ORF4290 - 0.00028 20.8 0.1 0.0006 19.8 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_5 PF07728.14 ORF4290 - 0.0021 18.1 0.1 0.054 13.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF4290 - 0.0035 17.6 0.1 0.015 15.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 ORF4290 - 0.007 16.0 0.3 0.025 14.1 0.0 1.9 1 1 0 2 2 2 1 AAA domain ThiS PF02597.20 ORF4290 - 0.0073 16.9 0.1 1.9 9.2 0.0 2.6 2 1 0 2 2 2 1 ThiS family Rad17 PF03215.15 ORF4290 - 0.0087 16.0 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_14 PF13173.6 ORF4290 - 0.0095 16.0 0.0 0.11 12.6 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_27 PF13514.6 ORF4290 - 0.01 15.4 0.0 0.061 12.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain Adeno_IVa2 PF02456.15 ORF4290 - 0.027 13.3 0.2 0.054 12.3 0.0 1.5 2 0 0 2 2 2 0 Adenovirus IVa2 protein DUF2813 PF11398.8 ORF4290 - 0.043 13.1 0.1 0.1 11.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) AAA_33 PF13671.6 ORF4290 - 0.064 13.4 0.3 0.52 10.5 0.2 2.3 1 1 1 2 2 2 0 AAA domain Mg_chelatase PF01078.21 ORF4290 - 0.073 12.4 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI MukB PF04310.12 ORF4290 - 0.076 12.8 0.2 0.28 11.0 0.0 1.8 2 0 0 2 2 2 0 MukB N-terminal AAA_28 PF13521.6 ORF4290 - 0.094 13.0 0.0 0.28 11.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF4290 - 0.14 12.6 0.0 0.33 11.3 0.0 1.6 2 0 0 2 2 1 0 RNA helicase NACHT PF05729.12 ORF4290 - 0.14 12.0 0.0 0.27 11.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ABC_ATPase PF09818.9 ORF4290 - 0.15 10.9 0.1 0.68 8.7 0.0 1.8 2 0 0 2 2 2 0 Predicted ATPase of the ABC class ATPase_2 PF01637.18 ORF4290 - 0.16 11.9 0.0 0.61 10.0 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea MCPsignal PF00015.21 ORF40953 - 1.6e-46 158.3 16.9 1.6e-46 158.3 16.9 2.5 2 1 1 3 3 3 2 Methyl-accepting chemotaxis protein (MCP) signalling domain Mur_ligase_C PF02875.21 ORF40953 - 0.0017 18.6 3.0 0.0063 16.7 0.2 2.8 2 2 1 3 3 3 1 Mur ligase family, glutamate ligase domain DUF948 PF06103.11 ORF40953 - 0.0022 18.2 24.0 0.049 13.9 5.7 4.1 2 2 1 3 3 3 1 Bacterial protein of unknown function (DUF948) TMP_2 PF06791.13 ORF40953 - 0.005 16.5 10.3 0.005 16.5 10.3 2.3 1 1 1 2 2 2 1 Prophage tail length tape measure protein Goodbye PF17109.5 ORF40953 - 0.03 14.8 7.1 0.18 12.3 0.4 2.7 2 2 0 2 2 2 0 fungal STAND N-terminal Goodbye domain Sec34 PF04136.15 ORF40953 - 0.044 13.7 5.6 1.2 9.0 0.4 2.6 2 0 0 2 2 2 0 Sec34-like family CdvA PF18822.1 ORF40953 - 0.094 12.5 4.4 4.3 7.2 0.2 3.4 2 1 0 3 3 3 0 CdvA-like coiled-coil domain Noelin-1 PF12308.8 ORF40953 - 0.16 11.9 9.0 0.75 9.8 0.9 3.4 2 2 1 3 3 3 0 Neurogenesis glycoprotein Pro-NT_NN PF07421.11 ORF40953 - 0.22 11.8 3.9 0.85 9.9 0.5 2.2 2 0 0 2 2 2 0 Neurotensin/neuromedin N precursor BLOC1_2 PF10046.9 ORF40953 - 0.25 11.7 12.8 0.92 9.9 1.0 3.8 2 2 2 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TMPIT PF07851.13 ORF40953 - 0.27 10.4 6.7 3.3 6.9 0.4 2.1 2 0 0 2 2 2 0 TMPIT-like protein ATP-synt_D PF01813.17 ORF40953 - 0.42 10.4 5.2 0.33 10.8 0.2 2.5 2 1 0 2 2 2 0 ATP synthase subunit D DUF2497 PF10691.9 ORF40953 - 0.45 11.0 0.1 0.45 11.0 0.1 3.5 2 2 2 4 4 4 0 Protein of unknown function (DUF2497) Acyl-CoA_dh_C PF12806.7 ORF40953 - 0.73 10.0 8.8 0.27 11.4 0.5 3.2 2 1 0 2 2 2 0 Acetyl-CoA dehydrogenase C-terminal like SKA2 PF16740.5 ORF40953 - 1.2 8.9 8.7 0.58 10.0 1.1 2.7 2 1 0 2 2 2 0 Spindle and kinetochore-associated protein 2 DUF1993 PF09351.10 ORF40953 - 1.4 9.1 9.4 6.5 6.9 2.3 2.6 1 1 0 2 2 2 0 Domain of unknown function (DUF1993) Syntaxin_2 PF14523.6 ORF40953 - 1.7 9.0 14.4 1.1 9.7 4.0 3.3 1 1 1 2 2 2 0 Syntaxin-like protein ZapB PF06005.12 ORF40953 - 1.9 9.0 5.1 4.5 7.8 0.2 2.9 3 0 0 3 3 3 0 Cell division protein ZapB CLZ PF16526.5 ORF40953 - 3 8.3 6.0 6.6 7.2 0.8 2.8 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF3461 PF11944.8 ORF40953 - 4.2 7.5 5.7 9.1 6.4 0.6 3.1 3 1 1 4 4 3 0 Protein of unknown function (DUF3461) DUF1664 PF07889.12 ORF40953 - 5 7.2 16.6 5.6 7.0 0.6 3.3 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) CENP-H PF05837.12 ORF40953 - 7.4 7.0 14.2 2.3 8.6 1.4 2.9 2 1 1 3 3 3 0 Centromere protein H (CENP-H) DUF3450 PF11932.8 ORF40953 - 8.4 5.6 18.7 0.65 9.2 4.8 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF3450) HisKA_3 PF07730.13 ORF40953 - 9.1 6.9 11.3 9.6 6.8 0.2 3.8 2 2 2 4 4 4 0 Histidine kinase Helicase_C PF00271.31 ORF40194 - 9.3e-29 100.0 0.0 1.3e-28 99.5 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UTP25 PF06862.12 ORF40194 - 0.03 13.1 0.0 0.038 12.8 0.0 1.1 1 0 0 1 1 1 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 DNA_pol3_chi PF04364.13 ORF40194 - 0.14 12.3 0.1 0.14 12.3 0.1 1.8 2 0 0 2 2 2 0 DNA polymerase III chi subunit, HolC cobW PF02492.19 ORF40194 - 0.17 11.5 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain EF-hand_6 PF13405.6 ORF32013 - 1.6e-10 40.0 5.5 2.9e-05 23.7 0.5 2.9 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF32013 - 2.6e-10 39.3 4.5 4e-05 22.9 0.4 2.8 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 ORF32013 - 4.5e-10 38.4 9.2 1.3e-05 24.3 0.6 3.2 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 ORF32013 - 3.5e-07 30.6 8.8 3.9e-05 24.0 2.0 3.0 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF32013 - 0.00035 20.3 3.7 0.14 12.0 0.3 2.8 2 1 0 2 2 2 2 EF-hand domain pair Nop14 PF04147.12 ORF32013 - 0.036 12.3 52.7 0.04 12.1 52.7 1.1 1 0 0 1 1 1 0 Nop14-like family RSN1_TM PF13967.6 ORF30299 - 0.16 11.7 0.0 0.31 10.8 0.0 1.5 1 0 0 1 1 1 0 Late exocytosis, associated with Golgi transport Bap31 PF05529.12 ORF30299 - 0.33 10.8 1.4 0.69 9.8 1.4 1.5 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region MoeA_C PF03454.15 ORF2935 - 6.7e-18 64.6 0.0 2.3e-17 62.9 0.0 1.9 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) Redoxin PF08534.10 ORF2935 - 0.14 11.8 0.1 0.26 11.0 0.1 1.4 1 0 0 1 1 1 0 Redoxin CstA PF02554.14 ORF29247 - 4.4e-80 269.4 15.2 5.2e-80 269.2 15.2 1.0 1 0 0 1 1 1 1 Carbon starvation protein CstA DUF1676 PF07898.13 ORF29247 - 0.029 14.4 1.0 0.053 13.6 1.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1676) CPP1-like PF11833.8 ORF29247 - 0.78 9.4 11.6 0.069 12.8 3.8 2.6 2 1 1 3 3 3 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF1068 PF06364.12 ORF28357 - 0.068 13.0 0.0 0.068 13.0 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1068) Arf PF00025.21 ORF27003 - 2.8e-73 245.1 0.2 3.6e-73 244.7 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF27003 - 6.2e-15 55.1 0.0 8e-15 54.7 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF27003 - 1.5e-14 54.2 0.0 2.2e-14 53.7 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF27003 - 2e-13 50.3 0.0 2.5e-13 49.9 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF27003 - 4.4e-11 42.5 1.1 2.3e-07 30.3 0.3 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF27003 - 5.2e-09 35.8 0.0 6.5e-09 35.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF27003 - 2.3e-05 24.5 0.0 3.5e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF27003 - 0.15 11.4 0.1 0.21 10.9 0.1 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase GUN4 PF05419.12 ORF24950 - 1e-45 155.2 0.1 1.4e-45 154.8 0.1 1.2 1 0 0 1 1 1 1 GUN4-like adh_short_C2 PF13561.6 ORF24735 - 7.3e-48 163.2 4.9 9.5e-48 162.8 4.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF24735 - 9.6e-48 162.2 5.0 1.2e-47 162.0 5.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF24735 - 3.7e-11 43.3 3.2 4.3e-10 39.8 3.2 2.1 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF24735 - 3.6e-05 23.4 1.2 6.9e-05 22.4 1.2 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF24735 - 0.0016 17.5 0.4 0.0023 17.0 0.4 1.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF24735 - 0.0061 16.0 0.3 0.018 14.5 0.1 1.8 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Sacchrp_dh_NADP PF03435.18 ORF24735 - 0.0085 16.3 0.6 0.015 15.5 0.6 1.4 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 ORF24735 - 0.017 15.2 0.0 0.033 14.2 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ADH_zinc_N PF00107.26 ORF24735 - 0.028 14.4 0.9 0.055 13.4 0.8 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 ORF24735 - 0.059 13.2 1.9 0.076 12.9 1.8 1.4 1 1 0 1 1 1 0 NAD(P)H-binding TrkA_N PF02254.18 ORF24735 - 0.061 13.6 0.4 0.1 12.9 0.4 1.5 1 0 0 1 1 1 0 TrkA-N domain GUN4 PF05419.12 ORF20515 - 1e-45 155.2 0.1 1.4e-45 154.8 0.1 1.2 1 0 0 1 1 1 1 GUN4-like Neurensin PF14927.6 ORF18300 - 0.072 12.8 0.8 0.072 12.8 0.8 2.5 3 0 0 3 3 3 0 Neurensin p25-alpha PF05517.12 ORF16142 - 0.026 14.7 1.1 0.026 14.7 1.1 2.2 2 1 0 2 2 2 0 p25-alpha adh_short_C2 PF13561.6 ORF152836 - 7.3e-48 163.2 4.9 9.5e-48 162.8 4.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF152836 - 9.6e-48 162.2 5.0 1.2e-47 162.0 5.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF152836 - 3.7e-11 43.3 3.2 4.3e-10 39.8 3.2 2.1 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF152836 - 3.6e-05 23.4 1.2 6.9e-05 22.4 1.2 1.8 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 ORF152836 - 0.0016 17.5 0.4 0.0023 17.0 0.4 1.3 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GDP_Man_Dehyd PF16363.5 ORF152836 - 0.0061 16.0 0.3 0.018 14.5 0.1 1.8 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Sacchrp_dh_NADP PF03435.18 ORF152836 - 0.0085 16.3 0.6 0.015 15.5 0.6 1.4 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Shikimate_DH PF01488.20 ORF152836 - 0.017 15.2 0.0 0.033 14.2 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ADH_zinc_N PF00107.26 ORF152836 - 0.028 14.4 0.9 0.055 13.4 0.8 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase NAD_binding_10 PF13460.6 ORF152836 - 0.059 13.2 1.9 0.076 12.9 1.8 1.4 1 1 0 1 1 1 0 NAD(P)H-binding SIR2 PF02146.17 ORF151110 - 9.7e-27 94.0 0.1 2.7e-25 89.3 0.1 2.0 1 1 0 1 1 1 1 Sir2 family Lip_A_acyltrans PF03279.13 ORF150754 - 1.2e-102 343.0 0.0 1.4e-102 342.9 0.0 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase Smr PF01713.21 ORF149259 - 1.3e-11 44.6 0.0 3e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Smr domain ETC_C1_NDUFA5 PF04716.14 ORF149259 - 3.1 7.7 8.6 1.2 9.1 0.1 2.7 2 0 0 2 2 2 0 ETC complex I subunit conserved region Phosducin PF02114.16 ORF146733 - 7.5e-11 41.5 0.5 9.7e-11 41.1 0.5 1.3 1 0 0 1 1 1 1 Phosducin PqqD PF05402.12 ORF146733 - 0.055 13.8 0.1 1.2 9.5 0.0 2.3 2 0 0 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) Herpes_BLLF1 PF05109.13 ORF145532 - 0.00057 18.0 17.4 0.00077 17.6 17.4 1.0 1 0 0 1 1 1 1 Herpes virus major outer envelope glycoprotein (BLLF1) Radical_SAM PF04055.21 ORF141704 - 1.2e-31 110.3 0.1 1.7e-31 109.9 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 ORF141704 - 5.9e-18 65.5 0.1 8e-18 65.0 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 ORF141704 - 4.2e-06 26.9 0.1 8.6e-06 25.9 0.1 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain MccV PF17508.2 ORF141595 - 0.17 12.5 0.0 0.3 11.7 0.0 1.4 1 0 0 1 1 1 0 Microcin V bacteriocin CAF1 PF04857.20 ORF140396 - 0.21 10.7 0.9 0.83 8.8 0.9 1.8 1 1 0 1 1 1 0 CAF1 family ribonuclease DUF2475 PF10629.9 ORF139940 - 2.4 8.4 4.7 20 5.5 0.3 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2475) DUF218 PF02698.17 ORF138306 - 5.3e-22 78.2 0.0 6.9e-22 77.9 0.0 1.2 1 0 0 1 1 1 1 DUF218 domain His_Phos_1 PF00300.22 ORF136719 - 4.1e-14 52.7 0.0 6.9e-13 48.7 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) ProRS-C_1 PF09180.11 ORF136719 - 0.0014 18.8 0.1 0.025 14.8 0.0 2.2 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal Ldh_2 PF02615.14 ORF134798 - 1.7e-63 214.8 1.3 1.9e-63 214.7 1.3 1.0 1 0 0 1 1 1 1 Malate/L-lactate dehydrogenase FSH1 PF03959.13 ORF132314 - 2.4e-30 105.8 0.0 3.3e-30 105.3 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) zf-RING_2 PF13639.6 ORF126500 - 1.8e-09 37.7 13.8 3.5e-09 36.9 13.8 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF126500 - 8.3e-08 32.0 15.7 1.3e-07 31.4 15.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF126500 - 2.2e-06 27.4 15.1 4.1e-06 26.5 15.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF126500 - 2e-05 24.3 12.8 5e-05 23.1 12.8 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 ORF126500 - 2.3e-05 24.1 14.1 4.5e-05 23.2 14.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF126500 - 0.00065 19.9 10.0 0.0014 18.9 10.0 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 ORF126500 - 0.00082 19.5 12.1 0.002 18.2 12.1 1.6 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-RING_5 PF14634.6 ORF126500 - 0.0012 18.8 16.2 0.0025 17.7 16.2 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Baculo_RING PF05883.11 ORF126500 - 0.0037 17.2 5.5 0.0095 15.9 5.5 1.8 1 1 0 1 1 1 1 Baculovirus U-box/Ring-like domain zf-C3HC4_4 PF15227.6 ORF126500 - 0.016 15.4 10.6 0.041 14.0 10.6 1.7 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF126500 - 0.02 14.9 8.3 0.045 13.8 8.3 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_4 PF14570.6 ORF126500 - 0.028 14.2 16.0 0.062 13.1 16.0 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Pro_CA PF00484.19 ORF126500 - 0.096 13.0 3.3 0.099 12.9 0.8 1.9 1 1 1 2 2 2 0 Carbonic anhydrase zf-C3HC4_5 PF17121.5 ORF126500 - 1.7 8.6 11.5 6.2 6.8 11.5 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF5362 PF17319.2 ORF126009 - 0.0025 17.6 2.1 0.54 10.1 0.1 2.5 2 0 0 2 2 2 2 Family of unknown function (DUF5362) VirB3 PF05101.13 ORF126009 - 0.18 12.1 6.5 0.14 12.5 1.1 2.3 2 0 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein Rdx PF10262.9 ORF123244 - 0.085 13.1 0.0 0.19 11.9 0.0 1.6 1 0 0 1 1 1 0 Rdx family RNHCP PF12647.7 ORF122052 - 0.31 11.0 4.5 0.84 9.7 4.5 1.7 1 0 0 1 1 1 0 RNHCP domain MAGE_N PF12440.8 ORF122051 - 1.3 9.8 23.0 0.21 12.3 15.0 2.4 2 0 0 2 2 2 0 Melanoma associated antigen family N terminal Mito_fiss_reg PF05308.11 ORF122051 - 7.7 6.5 9.3 0.57 10.2 4.6 1.4 2 0 0 2 2 2 0 Mitochondrial fission regulator cNMP_binding PF00027.29 ORF116735 - 1e-17 63.9 0.0 9e-14 51.3 0.0 2.3 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain DUF3490 PF11995.8 ORF116735 - 0.077 12.8 0.1 0.14 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3490) SHIPPO-rpt PF07004.12 ORF115558 - 0.057 14.3 31.8 0.16 12.9 1.2 5.7 6 0 0 6 6 6 0 Sperm-tail PG-rich repeat ABC_tran PF00005.27 ORF114245 - 2.2e-32 112.4 0.0 3.3e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 ORF114245 - 7.8e-11 41.6 0.1 2e-10 40.3 0.1 1.8 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 ORF114245 - 2.6e-07 30.8 0.4 0.0022 17.8 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 ORF114245 - 4.8e-05 23.9 0.4 0.00011 22.8 0.5 1.7 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 ORF114245 - 0.00016 21.5 0.3 0.093 12.4 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 ORF114245 - 0.0011 18.5 0.1 0.25 10.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 ORF114245 - 0.0011 19.2 1.1 0.034 14.4 1.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF114245 - 0.003 18.0 0.4 0.0099 16.3 0.4 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 ORF114245 - 0.016 14.9 0.0 0.035 13.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 ORF114245 - 0.027 14.2 0.0 0.24 11.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 ORF114245 - 0.058 13.0 0.2 0.21 11.2 0.0 1.9 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain FeoB_N PF02421.18 ORF114245 - 0.064 12.8 0.1 0.12 11.9 0.1 1.4 1 0 0 1 1 1 0 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF114245 - 0.086 12.7 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_33 PF13671.6 ORF114245 - 0.089 12.9 0.0 0.15 12.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF114245 - 0.12 12.4 0.0 0.48 10.5 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase ADK PF00406.22 ORF107659 - 3.8e-06 27.1 0.0 6.4e-06 26.3 0.0 1.4 1 1 0 1 1 1 1 Adenylate kinase Zn-ribbon_8 PF09723.10 ORF107659 - 0.03 14.4 0.2 0.087 13.0 0.2 1.8 1 1 0 1 1 1 0 Zinc ribbon domain A2L_zn_ribbon PF08792.10 ORF107659 - 0.039 13.7 2.1 0.78 9.5 0.1 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF4849 PF16141.5 ORF107659 - 0.072 12.3 0.3 0.14 11.4 0.1 1.5 2 0 0 2 2 2 0 Putative glycoside hydrolase Family 18, chitinase_18 ADK_lid PF05191.14 ORF107659 - 0.078 13.0 0.9 0.21 11.6 0.9 1.7 1 0 0 1 1 1 0 Adenylate kinase, active site lid DUF35_N PF12172.8 ORF107659 - 0.12 12.2 1.0 16 5.5 0.0 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Mut7-C PF01927.16 ORF107659 - 0.17 12.0 0.0 0.36 10.9 0.0 1.5 1 0 0 1 1 1 0 Mut7-C RNAse domain zf-C2H2_3 PF13878.6 ORF107659 - 0.29 11.0 1.7 0.51 10.2 0.2 2.1 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF4064 PF13273.6 ORF103476 - 0.027 14.8 0.2 0.069 13.4 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) ERGIC_N PF13850.6 ORF103476 - 0.047 14.0 1.2 0.079 13.3 0.2 1.9 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DSPn PF14671.6 ORF100008 - 4.6e-48 163.2 2.6 4.6e-48 163.2 2.6 1.4 2 0 0 2 2 2 1 Dual specificity protein phosphatase, N-terminal half # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks81.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks81.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks81.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks81.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:33:01 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DNA_gyraseB PF00204.25 NODE_28364_length_761_cov_87.207989_g8109_i2reverse_frame_1 - 0.12 11.8 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 DNA gyrase B Tubulin PF00091.25 NODE_28336_length_761_cov_1279.935262_g22290_i0reverse_frame_1 - 1.4e-58 198.4 0.0 1.6e-58 198.1 0.0 1.0 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_3 PF14881.6 NODE_28336_length_761_cov_1279.935262_g22290_i0reverse_frame_1 - 0.015 15.0 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 NODE_28336_length_761_cov_1279.935262_g22290_i0reverse_frame_1 - 0.071 12.3 0.0 0.093 11.9 0.0 1.1 1 0 0 1 1 1 0 Tubulin like CCDC14 PF15254.6 NODE_28336_length_761_cov_1279.935262_g22290_i0forward_frame_1 - 0.37 9.4 1.1 0.38 9.3 1.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 Asp_Arg_Hydrox PF05118.15 NODE_28300_length_762_cov_156.228336_g22260_i0forward_frame_1 - 3.7e-27 95.1 0.0 5.8e-27 94.4 0.0 1.4 1 1 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase Snf7 PF03357.21 NODE_28277_length_762_cov_4178.698762_g21680_i1reverse_frame_1 - 1.4e-18 67.1 27.7 1.4e-18 67.1 27.7 2.2 2 1 1 3 3 3 1 Snf7 DSBA PF01323.20 NODE_28277_length_762_cov_4178.698762_g21680_i1reverse_frame_1 - 0.097 12.4 5.7 0.13 12.0 4.7 1.7 1 1 1 2 2 2 0 DSBA-like thioredoxin domain DUF2258 PF10015.9 NODE_28277_length_762_cov_4178.698762_g21680_i1reverse_frame_1 - 0.12 12.5 0.5 0.12 12.5 0.5 2.3 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2258) DUF5065 PF16723.5 NODE_28273_length_763_cov_3.491758_g22237_i0reverse_frame_2 - 0.13 12.3 4.8 0.14 12.3 3.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF5065) DIRP PF06584.13 NODE_28271_length_763_cov_3.925824_g22235_i0reverse_frame_3 - 0.079 13.2 0.2 0.15 12.2 0.2 1.4 1 0 0 1 1 1 0 DIRP IMPDH PF00478.25 NODE_28271_length_763_cov_3.925824_g22235_i0reverse_frame_2 - 9e-39 133.4 0.1 1.1e-38 133.2 0.1 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 NODE_28271_length_763_cov_3.925824_g22235_i0reverse_frame_2 - 3e-16 59.6 4.8 2.1e-09 37.7 0.1 2.8 2 1 1 3 3 3 2 CBS domain NMO PF03060.15 NODE_28271_length_763_cov_3.925824_g22235_i0reverse_frame_2 - 9.4e-05 22.0 0.1 0.00012 21.5 0.1 1.3 1 1 0 1 1 1 1 Nitronate monooxygenase HAD_2 PF13419.6 NODE_28251_length_763_cov_158.009615_g22216_i0reverse_frame_2 - 6.7e-24 84.9 0.0 8.3e-24 84.6 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 NODE_28251_length_763_cov_158.009615_g22216_i0reverse_frame_2 - 4.8e-13 49.9 0.0 2.4e-11 44.4 0.0 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 NODE_28251_length_763_cov_158.009615_g22216_i0reverse_frame_2 - 2.2e-08 34.7 0.0 3.8e-08 34.0 0.0 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 NODE_28251_length_763_cov_158.009615_g22216_i0reverse_frame_2 - 7.4e-05 22.7 0.0 0.00014 21.9 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like Keratin_B2_2 PF13885.6 NODE_28220_length_764_cov_19.798354_g22192_i0forward_frame_2 - 0.013 15.5 28.4 0.013 15.5 28.4 6.6 1 1 3 4 4 4 0 Keratin, high sulfur B2 protein SesA PF17107.5 NODE_28217_length_764_cov_81.720165_g22189_i0forward_frame_3 - 0.019 15.2 1.6 0.029 14.6 0.3 2.0 2 1 1 3 3 3 0 N-terminal domain on NACHT_NTPase and P-loop NTPases DUF4312 PF14189.6 NODE_28210_length_764_cov_151.729767_g22182_i0forward_frame_3 - 0.09 12.8 0.4 0.09 12.8 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4312) Pkinase PF00069.25 NODE_28192_length_764_cov_411.165981_g2123_i1reverse_frame_3 - 3.3e-10 39.8 0.0 4.8e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_28192_length_764_cov_411.165981_g2123_i1reverse_frame_3 - 6.1e-09 35.5 0.0 8.4e-09 35.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase adh_short PF00106.25 ORF98703 - 8.3e-64 214.6 1.1 1e-63 214.4 1.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF98703 - 2.9e-60 203.7 0.3 3.3e-60 203.5 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF98703 - 1.3e-11 44.8 0.2 1.9e-11 44.2 0.2 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 ORF98703 - 0.004 16.6 0.0 0.0054 16.1 0.0 1.2 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) DUF5405 PF17399.2 ORF98703 - 0.0088 16.3 0.0 0.021 15.1 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5405) SNARE_assoc PF09335.11 ORF98681 - 7.5e-19 68.4 10.1 1.7e-18 67.2 1.7 2.3 1 1 1 2 2 2 2 SNARE associated Golgi protein PNP_UDP_1 PF01048.20 ORF9838 - 8.3e-41 139.8 1.5 9.3e-41 139.6 1.5 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Chloroa_b-bind PF00504.21 ORF97663 - 2.6e-29 102.8 0.5 6.3e-29 101.6 0.2 1.7 2 0 0 2 2 2 1 Chlorophyll A-B binding protein RRM_1 PF00076.22 ORF97462 - 0.00025 20.8 0.0 0.00057 19.7 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Mit_KHE1 PF10173.9 ORF97462 - 0.1 12.7 2.3 3.7 7.6 1.1 2.1 1 1 1 2 2 2 0 Mitochondrial K+-H+ exchange-related zf-C2H2 PF00096.26 ORF87273 - 2.2e-08 34.1 6.4 2.4e-05 24.6 1.7 3.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF87273 - 7.9e-08 32.4 1.0 7.9e-08 32.4 1.0 3.9 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF87273 - 2.3e-06 27.9 5.7 0.0012 19.5 1.2 3.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF87273 - 0.00044 20.5 2.9 0.00044 20.5 2.9 2.2 2 0 0 2 2 2 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF87273 - 0.016 15.6 1.6 0.076 13.4 0.3 2.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-H2C2_5 PF13909.6 ORF87273 - 1.5 8.6 8.9 0.7 9.7 4.8 2.6 2 1 0 2 2 2 0 C2H2-type zinc-finger domain TFIIA PF03153.13 ORF86623 - 1.7 8.5 29.2 2.8 7.8 29.2 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit HalX PF08663.10 ORF86266 - 0.079 13.3 13.0 0.27 11.6 1.0 3.5 4 0 0 4 4 4 0 HalX domain DUF948 PF06103.11 ORF86266 - 0.82 10.0 2.4 1.6 9.1 0.9 2.1 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Lebercilin PF15619.6 ORF86266 - 3.3 7.3 34.5 10 5.7 1.0 2.2 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DASH_Dam1 PF08653.10 ORF86266 - 3.4 7.5 4.9 7.1 6.5 0.4 3.1 3 1 0 3 3 3 0 DASH complex subunit Dam1 ALMT PF11744.8 ORF86266 - 4.2 6.1 9.5 4.9 5.9 9.5 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter BST2 PF16716.5 ORF86266 - 7.4 7.2 21.5 2.5 8.7 3.3 3.1 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 zf-RING_2 PF13639.6 ORF85758 - 1.6e-08 34.8 13.8 1.6e-08 34.8 13.8 2.8 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF85758 - 0.002 18.3 14.1 0.002 18.3 14.1 2.3 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF85758 - 0.0026 17.5 11.1 0.0026 17.5 11.1 2.9 2 0 0 2 2 2 1 RING-like zinc finger TMEM192 PF14802.6 ORF85758 - 0.013 14.6 0.9 0.017 14.2 0.2 1.4 2 0 0 2 2 2 0 TMEM192 family DUF805 PF05656.14 ORF85758 - 1.2 9.6 3.2 4.8 7.6 3.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF805) ETF PF01012.21 ORF81244 - 1.1e-38 133.0 0.1 1.4e-38 132.6 0.1 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain TcfC PF16967.5 ORF81244 - 0.094 12.2 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 E-set like domain DUF4116 PF13475.6 ORF78742 - 0.028 14.2 2.0 0.21 11.3 0.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4116) Pkinase PF00069.25 ORF78058 - 9.7e-70 234.9 0.8 1.2e-69 234.6 0.8 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF78058 - 1e-42 146.3 0.0 1.2e-42 146.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF78058 - 8.2e-09 35.2 0.0 3.3e-06 26.6 0.0 2.3 1 1 1 2 2 2 2 Kinase-like Pkinase_fungal PF17667.1 ORF78058 - 2.9e-06 26.3 0.0 4.3e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF78058 - 0.00058 19.0 0.1 0.0013 17.8 0.1 1.6 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 ORF78058 - 0.0006 19.8 0.0 0.03 14.2 0.0 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF78058 - 0.0011 18.4 0.1 0.0014 18.0 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF78058 - 0.0043 16.7 0.5 0.0079 15.8 0.5 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase FTA2 PF13095.6 ORF78058 - 0.039 13.6 0.1 0.071 12.7 0.0 1.5 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 PIP49_C PF12260.8 ORF78058 - 0.04 13.5 0.0 0.063 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 Haspin_kinase PF12330.8 ORF78058 - 0.049 12.6 0.2 0.14 11.0 0.2 1.9 1 1 0 1 1 1 0 Haspin like kinase domain NAD_Gly3P_dh_N PF01210.23 ORF78058 - 0.11 12.5 0.0 0.17 11.9 0.0 1.5 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SURF1 PF02104.15 ORF71157 - 9.6e-13 48.7 0.0 1.2e-12 48.4 0.0 1.1 1 0 0 1 1 1 1 SURF1 family PUB PF09409.10 ORF66843 - 3.5e-18 65.3 0.0 5.3e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 PUB domain Hexokinase_1 PF00349.21 ORF66843 - 0.076 12.9 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Hexokinase Suf PF05843.14 ORF66843 - 0.12 12.3 2.4 0.15 12.0 2.4 1.1 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) Abhydrolase_1 PF00561.20 ORF64882 - 4.1e-24 85.6 0.6 2.6e-18 66.6 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF64882 - 7e-19 69.3 6.1 8.1e-19 69.1 6.1 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF64882 - 4e-11 42.6 0.1 5.4e-08 32.4 0.1 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 PGAP1 PF07819.13 ORF64882 - 3.1e-09 36.9 0.2 4.9e-05 23.2 0.0 2.3 2 1 0 3 3 3 2 PGAP1-like protein Thioesterase PF00975.20 ORF64882 - 0.00014 22.0 0.0 0.00019 21.6 0.0 1.5 1 1 0 1 1 1 1 Thioesterase domain DUF915 PF06028.11 ORF64882 - 0.00072 19.0 0.0 0.092 12.1 0.0 2.2 1 1 1 2 2 2 2 Alpha/beta hydrolase of unknown function (DUF915) DUF676 PF05057.14 ORF64882 - 0.0015 18.1 0.0 0.0029 17.1 0.0 1.5 1 1 0 1 1 1 1 Putative serine esterase (DUF676) Abhydrolase_4 PF08386.10 ORF64882 - 0.015 15.4 0.0 0.12 12.5 0.0 2.2 2 0 0 2 2 2 0 TAP-like protein Ndr PF03096.14 ORF64882 - 0.017 13.8 0.0 2.8 6.6 0.0 2.1 2 0 0 2 2 2 0 Ndr family Chlorophyllase2 PF12740.7 ORF64882 - 0.11 11.4 0.0 0.15 10.9 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme LapA_dom PF06305.11 ORF64648 - 2e-05 24.3 0.4 3.2e-05 23.6 0.4 1.3 1 0 0 1 1 1 1 Lipopolysaccharide assembly protein A domain Myc_target_1 PF15179.6 ORF64648 - 0.00036 20.5 0.0 0.0006 19.8 0.0 1.4 1 0 0 1 1 1 1 Myc target protein 1 CD34_antigen PF06365.12 ORF64648 - 0.00087 18.9 0.4 0.0018 17.9 0.1 1.6 1 1 0 1 1 1 1 CD34/Podocalyxin family Otopetrin PF03189.13 ORF64648 - 0.0021 16.9 0.5 0.0025 16.7 0.5 1.2 1 0 0 1 1 1 1 Otopetrin SID-1_RNA_chan PF13965.6 ORF64648 - 0.0022 16.5 0.5 0.0022 16.5 0.5 2.1 2 0 0 2 2 2 1 dsRNA-gated channel SID-1 WBP-1 PF11669.8 ORF64648 - 0.0052 17.4 0.8 0.0052 17.4 0.8 2.2 2 0 0 2 2 1 1 WW domain-binding protein 1 EphA2_TM PF14575.6 ORF64648 - 0.0053 17.6 1.8 0.016 16.1 1.8 2.0 1 1 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain Vpu PF00558.19 ORF64648 - 0.0084 15.9 5.8 0.011 15.5 0.1 2.3 2 0 0 2 2 2 1 Vpu protein TEX29 PF15839.5 ORF64648 - 0.01 16.4 3.7 0.01 16.4 3.7 1.6 2 0 0 2 2 1 0 Testis-expressed sequence 29 protein Adeno_E3_CR2 PF02439.15 ORF64648 - 0.013 15.2 1.3 0.028 14.2 1.3 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 SieB PF14163.6 ORF64648 - 0.015 14.8 0.4 0.026 14.0 0.4 1.3 1 0 0 1 1 1 0 Super-infection exclusion protein B DUF4381 PF14316.6 ORF64648 - 0.019 15.2 0.0 0.036 14.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) MAP17 PF15807.5 ORF64648 - 0.02 15.1 14.2 0.44 10.8 14.2 2.5 1 1 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 Protocadherin PF08374.11 ORF64648 - 0.023 14.7 0.1 0.033 14.2 0.1 1.3 1 0 0 1 1 1 0 Protocadherin Gypsy PF07253.11 ORF64648 - 0.038 12.5 0.0 0.052 12.1 0.0 1.2 1 0 0 1 1 1 0 Gypsy protein 7tm_1 PF00001.21 ORF64648 - 0.087 12.1 0.4 0.095 12.0 0.0 1.4 2 0 0 2 2 2 0 7 transmembrane receptor (rhodopsin family) Glycophorin_A PF01102.18 ORF64648 - 0.1 12.8 0.2 0.21 11.8 0.1 1.6 1 1 0 1 1 1 0 Glycophorin A Neur_chan_memb PF02932.16 ORF64648 - 0.11 12.6 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region Presenilin PF01080.17 ORF64648 - 0.15 10.8 2.3 0.2 10.4 2.3 1.4 1 0 0 1 1 1 0 Presenilin DUF4446 PF14584.6 ORF64648 - 0.19 11.7 3.3 0.11 12.5 0.7 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) DUF4199 PF13858.6 ORF64648 - 0.29 11.5 0.1 0.29 11.5 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) YajC PF02699.15 ORF64648 - 0.54 10.2 3.7 1.4 8.9 3.7 1.7 1 1 0 1 1 1 0 Preprotein translocase subunit Chloroa_b-bind PF00504.21 ORF60775 - 4e-31 108.7 0.3 7.4e-31 107.8 0.1 1.5 1 1 1 2 2 2 2 Chlorophyll A-B binding protein OMPdecase PF00215.24 ORF60775 - 0.011 15.4 0.0 0.027 14.1 0.0 1.6 2 0 0 2 2 2 0 Orotidine 5'-phosphate decarboxylase / HUMPS family DNA_pol3_beta_2 PF02767.16 ORF59017 - 0.085 13.1 1.6 0.5 10.6 0.0 2.4 3 0 0 3 3 3 0 DNA polymerase III beta subunit, central domain Calc_CGRP_IAPP PF00214.19 ORF58099 - 0.082 13.3 0.7 0.14 12.6 0.7 1.4 1 0 0 1 1 1 0 Calcitonin / CGRP / IAPP family SF-assemblin PF06705.11 ORF5797 - 1.7e-07 30.9 27.9 2.4e-07 30.4 27.4 1.6 1 1 0 1 1 1 1 SF-assemblin/beta giardin DUF3584 PF12128.8 ORF5797 - 0.00054 17.6 13.8 0.00054 17.6 13.8 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3584) Baculo_PEP_C PF04513.12 ORF5797 - 0.0014 18.7 6.8 0.085 12.9 3.2 2.7 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus OmpH PF03938.14 ORF5797 - 0.014 15.8 25.6 0.28 11.5 1.8 3.3 1 1 1 3 3 3 0 Outer membrane protein (OmpH-like) SseC PF04888.12 ORF5797 - 0.044 13.4 9.5 0.039 13.6 2.0 2.6 1 1 2 3 3 3 0 Secretion system effector C (SseC) like family DUF1957 PF09210.11 ORF5797 - 0.14 12.6 3.2 0.34 11.3 0.7 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF1957) NPV_P10 PF05531.12 ORF5797 - 3.1 8.3 16.3 0.48 10.9 1.6 3.9 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein Mt_ATP-synt_D PF05873.12 ORF5797 - 3.4 7.5 18.8 1.9 8.3 0.8 3.8 1 1 3 4 4 4 0 ATP synthase D chain, mitochondrial (ATP5H) Exonuc_VII_L PF02601.15 ORF5797 - 6.2 6.3 18.0 3.3e+02 0.6 18.0 2.1 1 1 0 1 1 1 0 Exonuclease VII, large subunit Matrilin_ccoil PF10393.9 ORF5797 - 7.2 6.6 8.3 24 4.9 0.3 3.7 4 1 0 4 4 4 0 Trimeric coiled-coil oligomerisation domain of matrilin Heme_oxygenase PF01126.20 ORF53322 - 8.5e-61 205.3 0.0 1e-60 205.0 0.0 1.1 1 0 0 1 1 1 1 Heme oxygenase Cupredoxin_1 PF13473.6 ORF48613 - 0.19 11.8 2.3 0.32 11.1 0.6 2.0 1 1 1 2 2 2 0 Cupredoxin-like domain zf-C2H2 PF00096.26 ORF45486 - 6.5e-16 57.8 20.2 3.9e-06 27.0 3.0 3.6 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF45486 - 5.1e-12 45.6 16.6 0.00012 22.6 1.7 3.8 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF45486 - 4.3e-10 39.5 25.0 3.2e-09 36.8 3.8 4.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_6 PF13912.6 ORF45486 - 5.4e-08 32.6 19.2 0.0011 18.9 2.2 4.5 4 0 0 4 4 4 3 C2H2-type zinc finger zf-C2H2_11 PF16622.5 ORF45486 - 2e-07 30.6 3.8 0.00011 21.9 0.5 2.8 3 0 0 3 3 3 2 zinc-finger C2H2-type zf-C2H2_8 PF15909.5 ORF45486 - 0.00069 19.9 5.6 0.00088 19.5 3.8 2.0 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_jaz PF12171.8 ORF45486 - 0.0011 19.2 10.1 0.066 13.5 0.6 3.7 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf_ZIC PF18366.1 ORF45486 - 0.013 15.6 8.8 5.8 7.1 0.3 3.4 1 1 2 3 3 3 0 Zic proteins zinc finger domain zf-met PF12874.7 ORF45486 - 0.035 14.5 12.0 0.057 13.8 0.8 3.7 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-BED PF02892.15 ORF45486 - 0.17 11.9 18.6 0.063 13.3 3.4 3.3 1 1 2 3 3 3 0 BED zinc finger zf-H2C2_5 PF13909.6 ORF45486 - 2.2 8.1 19.4 0.3 10.9 4.5 3.9 3 2 0 3 3 3 0 C2H2-type zinc-finger domain CpXC PF14353.6 ORF45486 - 2.7 8.0 7.2 2.4e+02 1.8 3.3 3.2 1 1 1 2 2 2 0 CpXC protein FAD_binding_9 PF08021.11 ORF45000 - 2.9e-35 121.1 0.0 1.7e-34 118.7 0.0 1.9 2 0 0 2 2 2 1 Siderophore-interacting FAD-binding domain SIP PF04954.13 ORF45000 - 3.8e-21 75.8 0.4 5.1e-21 75.4 0.4 1.2 1 0 0 1 1 1 1 Siderophore-interacting protein DUF1918 PF08940.11 ORF45000 - 0.0053 16.4 0.1 3.7 7.2 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF1918) Chloroa_b-bind PF00504.21 ORF4103 - 2.6e-29 102.8 0.5 6.3e-29 101.6 0.2 1.7 2 0 0 2 2 2 1 Chlorophyll A-B binding protein Patatin PF01734.22 ORF38981 - 9e-11 42.3 0.0 3.9e-10 40.2 0.0 2.0 1 1 0 1 1 1 1 Patatin-like phospholipase RWD PF05773.22 ORF35869 - 1.5e-19 70.4 3.0 3.6e-19 69.1 3.0 1.7 1 0 0 1 1 1 1 RWD domain DGCR6 PF07324.11 ORF35869 - 0.0023 17.6 4.0 0.0033 17.1 4.0 1.2 1 0 0 1 1 1 1 DiGeorge syndrome critical region 6 (DGCR6) protein DFRP_C PF16543.5 ORF35869 - 0.0054 17.2 8.3 0.0054 17.2 8.3 2.4 1 1 1 2 2 2 1 DRG Family Regulatory Proteins, Tma46 Homeodomain PF00046.29 ORF34055 - 6.6e-08 32.3 4.6 1.5e-07 31.1 4.6 1.6 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 ORF34055 - 0.067 12.7 1.5 0.14 11.6 1.5 1.6 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez peroxidase PF00141.23 ORF32513 - 0.042 13.5 0.0 0.084 12.5 0.0 1.5 1 0 0 1 1 1 0 Peroxidase Fer4_4 PF12800.7 ORF32513 - 5.8 7.7 9.6 0.44 11.2 3.4 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain zf-C2H2 PF00096.26 ORF32076 - 2.2e-08 34.1 6.4 2.4e-05 24.6 1.7 3.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF32076 - 7.9e-08 32.4 1.0 7.9e-08 32.4 1.0 3.9 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF32076 - 2.3e-06 27.9 5.7 0.0012 19.5 1.2 3.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF32076 - 0.00044 20.5 2.9 0.00044 20.5 2.9 2.2 2 0 0 2 2 2 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF32076 - 0.016 15.6 1.6 0.076 13.4 0.3 2.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-H2C2_5 PF13909.6 ORF32076 - 1.5 8.6 8.9 0.7 9.7 4.8 2.6 2 1 0 2 2 2 0 C2H2-type zinc-finger domain NAGPA PF09992.9 ORF31519 - 3.1e-16 60.1 0.1 3.8e-16 59.8 0.1 1.1 1 0 0 1 1 1 1 Phosphodiester glycosidase FAM165 PF14981.6 ORF29562 - 0.17 11.7 1.9 16 5.4 0.0 2.7 3 0 0 3 3 3 0 FAM165 family UCH PF00443.29 ORF25755 - 2.3e-23 83.0 0.4 2.9e-23 82.7 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MAJIN PF15077.6 ORF25755 - 0.0019 18.0 0.5 0.0025 17.6 0.5 1.1 1 0 0 1 1 1 1 Membrane-anchored junction protein Peptidase_C98 PF15499.6 ORF25755 - 0.0022 17.5 0.6 0.011 15.3 0.2 2.1 2 0 0 2 2 2 1 Ubiquitin-specific peptidase-like, SUMO isopeptidase UCH_1 PF13423.6 ORF25755 - 0.0043 16.7 3.6 0.014 15.0 3.6 1.7 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DAG_kinase_N PF14513.6 ORF25755 - 0.017 15.3 2.7 0.028 14.6 2.7 1.3 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus DUF2722 PF10846.8 ORF25755 - 0.1 11.5 5.7 0.13 11.2 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) RNA_pol_Rpc4 PF05132.14 ORF25755 - 0.19 12.2 2.9 0.26 11.7 2.9 1.3 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF3292 PF11696.8 ORF25755 - 0.32 9.3 3.7 0.4 9.0 3.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) Presenilin PF01080.17 ORF25755 - 2.1 7.0 3.3 2.6 6.7 3.3 1.2 1 0 0 1 1 1 0 Presenilin DUF913 PF06025.12 ORF25755 - 2.4 7.0 5.7 3.2 6.7 5.7 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) THOC2_N PF16134.5 ORF25755 - 3.3 6.2 8.4 4.9 5.7 8.4 1.2 1 0 0 1 1 1 0 THO complex subunit 2 N-terminus zf-CCHH PF10283.9 ORF24564 - 0.2 11.7 3.2 5.1 7.2 0.5 2.6 2 0 0 2 2 2 0 PBZ domain Pkinase PF00069.25 ORF23855 - 9.2e-60 202.2 0.0 1.1e-59 202.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF23855 - 2.2e-27 96.0 0.0 2.9e-27 95.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF23855 - 7.5e-06 25.5 0.0 1e-05 25.1 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF23855 - 0.082 11.8 0.1 0.11 11.4 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Seadorna_VP7 PF07387.11 ORF23855 - 0.084 11.9 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Ndc1_Nup PF09531.10 ORF22588 - 6.4 5.3 7.9 8.1 5.0 7.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DSPc PF00782.20 ORF2231 - 5.6e-07 29.4 1.7 6.2e-07 29.3 0.3 1.8 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain CDKN3 PF05706.12 ORF2231 - 3.5e-06 26.8 0.2 5.2e-06 26.2 0.2 1.3 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase PF00102.27 ORF2231 - 6.2e-06 25.9 0.1 6.2e-06 25.9 0.1 1.6 2 0 0 2 2 2 1 Protein-tyrosine phosphatase zf-C2H2 PF00096.26 ORF21231 - 2.2e-08 34.1 6.4 2.4e-05 24.6 1.7 3.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF21231 - 7.9e-08 32.4 1.0 7.9e-08 32.4 1.0 3.9 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF21231 - 2.3e-06 27.9 5.7 0.0012 19.5 1.2 3.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF21231 - 0.00044 20.5 2.9 0.00044 20.5 2.9 2.2 2 0 0 2 2 2 1 C2H2-type zinc ribbon zf-met PF12874.7 ORF21231 - 0.016 15.6 1.6 0.076 13.4 0.3 2.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-H2C2_5 PF13909.6 ORF21231 - 1.5 8.6 8.9 0.7 9.7 4.8 2.6 2 1 0 2 2 2 0 C2H2-type zinc-finger domain ELO PF01151.18 ORF20991 - 1.1e-49 169.3 11.8 1.2e-49 169.1 11.8 1.0 1 0 0 1 1 1 1 GNS1/SUR4 family Lentivirus_VIF PF05851.11 ORF18670 - 0.059 12.3 1.2 0.079 11.9 1.2 1.1 1 0 0 1 1 1 0 Lentivirus virion infectivity factor (VIF) adh_short PF00106.25 ORF16577 - 0.23 10.9 0.0 0.36 10.3 0.0 1.2 1 0 0 1 1 1 0 short chain dehydrogenase Clathrin_lg_ch PF01086.17 ORF151220 - 6.5e-06 26.4 16.1 6.5e-06 26.4 16.1 1.6 2 0 0 2 2 2 1 Clathrin light chain MRP-S27 PF10037.9 ORF151220 - 0.015 14.2 25.4 0.0075 15.2 23.6 1.4 1 1 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 S-AdoMet_synt_M PF02772.16 ORF151220 - 0.7 10.2 5.4 1.5 9.1 5.4 1.6 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, central domain FlgM PF04316.13 ORF151220 - 2.7 8.4 9.6 2.4 8.6 2.2 2.7 1 1 1 2 2 2 0 Anti-sigma-28 factor, FlgM LptF_LptG PF03739.14 ORF151220 - 4.2 6.1 5.8 4.8 5.9 5.8 1.1 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG His_Phos_1 PF00300.22 ORF151035 - 7e-37 127.0 0.0 1.7e-28 99.7 0.0 2.0 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) Polyketide_cyc PF03364.20 ORF147080 - 0.008 16.4 0.0 0.02 15.1 0.0 1.7 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport PsaX PF08078.12 ORF147008 - 0.48 10.4 6.5 6.4 6.8 3.4 2.9 2 1 0 2 2 2 0 PsaX family DUF2678 PF10856.8 ORF147008 - 1 9.3 7.7 0.86 9.5 3.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2678) Patched PF02460.18 ORF142397 - 5.7e-11 41.3 22.6 7.2e-11 40.9 22.6 1.0 1 0 0 1 1 1 1 Patched family MMPL PF03176.15 ORF142397 - 0.0003 19.8 16.1 0.00042 19.4 16.1 1.1 1 0 0 1 1 1 1 MMPL family SecD_SecF PF02355.16 ORF142397 - 0.069 12.5 17.7 0.11 11.9 17.7 1.3 1 0 0 1 1 1 0 Protein export membrane protein Sterol-sensing PF12349.8 ORF142397 - 0.079 12.8 17.3 0.07 13.0 16.3 1.4 1 1 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation PIG-F PF06699.11 ORF142397 - 1 9.5 10.9 1.9 8.6 10.8 1.4 1 1 0 1 1 1 0 GPI biosynthesis protein family Pig-F DUF3021 PF11457.8 ORF142397 - 1.7 8.9 21.1 4.6 7.6 7.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3021) ACR_tran PF00873.19 ORF142397 - 2.3 5.7 18.8 3 5.4 18.8 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family DUF2207 PF09972.9 ORF142397 - 5.7 5.6 11.7 3.3 6.4 3.0 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) adh_short PF00106.25 ORF141855 - 0.23 10.9 0.0 0.36 10.3 0.0 1.2 1 0 0 1 1 1 0 short chain dehydrogenase PH PF00169.29 ORF140201 - 0.00032 21.2 1.1 0.0086 16.6 0.0 2.6 2 1 1 3 3 3 2 PH domain UT PF03253.14 ORF13909 - 1.1e-28 100.3 23.2 1.2e-28 100.1 23.2 1.1 1 0 0 1 1 1 1 Urea transporter GntR PF00392.21 ORF138386 - 7.1e-26 89.6 0.4 1.6e-25 88.5 0.4 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FCD PF07729.12 ORF138386 - 1.3e-17 64.4 11.1 2.5e-17 63.5 11.1 1.5 1 0 0 1 1 1 1 FCD domain MarR PF01047.22 ORF138386 - 0.00017 21.4 0.2 0.00097 19.0 0.0 2.3 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 ORF138386 - 0.00042 20.2 0.3 0.0016 18.3 0.1 2.1 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 ORF138386 - 0.0024 17.4 0.0 0.0066 16.0 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PaaX PF07848.12 ORF138386 - 0.0024 18.0 0.1 0.0057 16.8 0.1 1.6 1 0 0 1 1 1 1 PaaX-like protein HTH_DeoR PF08220.12 ORF138386 - 0.0027 17.4 0.0 0.0067 16.2 0.0 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_11 PF08279.12 ORF138386 - 0.0031 17.4 0.0 0.0084 16.0 0.0 1.7 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 ORF138386 - 0.0039 17.0 0.3 0.022 14.7 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.6 ORF138386 - 0.012 15.7 1.6 0.02 15.0 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 ORF138386 - 0.018 15.2 0.0 0.032 14.4 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_29 PF13551.6 ORF138386 - 0.042 13.9 1.0 0.12 12.4 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn helix Rrf2 PF02082.20 ORF138386 - 0.085 13.2 0.2 0.21 11.9 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator HTH_10 PF04967.12 ORF138386 - 0.088 12.6 0.0 0.23 11.3 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain HTH_41 PF14502.6 ORF138386 - 0.14 11.9 0.0 0.3 10.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HATPase_c_2 PF13581.6 ORF138386 - 0.15 12.0 0.3 0.22 11.5 0.3 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Mod_r PF07200.13 ORF136301 - 0.021 14.9 4.9 0.021 14.9 4.9 2.5 2 1 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein FlaC_arch PF05377.11 ORF136301 - 0.046 14.1 7.4 0.059 13.8 2.8 3.2 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) DUF1664 PF07889.12 ORF136301 - 0.058 13.4 2.5 0.16 12.0 2.5 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0228 PF05727.11 ORF136301 - 0.1 12.4 3.7 0.2 11.5 3.3 1.7 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0228) RTX_C PF08339.10 ORF136301 - 0.2 11.7 5.6 0.094 12.8 2.2 2.0 2 0 0 2 2 2 0 RTX C-terminal domain DUF3552 PF12072.8 ORF136301 - 0.48 9.8 6.6 0.88 9.0 6.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TerC PF03741.16 ORF123243 - 1.7e-13 50.7 2.8 5.1e-13 49.1 3.1 1.5 2 0 0 2 2 2 1 Integral membrane protein TerC family DUF3377 PF11857.8 ORF123243 - 0.73 9.8 2.8 2.4 8.2 0.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) MAP PF03642.13 ORF123052 - 2.9 8.3 9.5 1.1 9.6 0.5 3.5 1 1 3 4 4 4 0 MAP domain RP-C_C PF11800.8 ORF123052 - 3.8 7.6 15.4 8 6.5 15.4 1.7 1 1 0 1 1 1 0 Replication protein C C-terminal region GIY-YIG PF01541.24 ORF123052 - 7.6 6.9 10.0 1.4 9.2 2.6 2.9 2 1 1 3 3 3 0 GIY-YIG catalytic domain PP2C PF00481.21 ORF11982 - 7.5e-40 137.2 0.0 1e-39 136.7 0.0 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF11982 - 0.11 12.1 0.0 0.36 10.4 0.0 1.7 1 1 0 1 1 1 0 Protein phosphatase 2C Enterotoxin_HS1 PF08090.11 ORF119719 - 0.046 13.7 0.5 0.11 12.5 0.5 1.7 1 0 0 1 1 1 0 Heat stable E.coli enterotoxin 1 Pkinase PF00069.25 ORF117835 - 9.7e-70 234.9 0.8 1.2e-69 234.6 0.8 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF117835 - 1e-42 146.3 0.0 1.2e-42 146.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF117835 - 8.2e-09 35.2 0.0 3.3e-06 26.6 0.0 2.3 1 1 1 2 2 2 2 Kinase-like Pkinase_fungal PF17667.1 ORF117835 - 2.9e-06 26.3 0.0 4.3e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 ORF117835 - 0.00058 19.0 0.1 0.0013 17.8 0.1 1.6 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 ORF117835 - 0.0006 19.8 0.0 0.03 14.2 0.0 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF117835 - 0.0011 18.4 0.1 0.0014 18.0 0.1 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF117835 - 0.0043 16.7 0.5 0.0079 15.8 0.5 1.6 1 1 0 1 1 1 1 Choline/ethanolamine kinase FTA2 PF13095.6 ORF117835 - 0.039 13.6 0.1 0.071 12.7 0.0 1.5 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 PIP49_C PF12260.8 ORF117835 - 0.04 13.5 0.0 0.063 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 Haspin_kinase PF12330.8 ORF117835 - 0.049 12.6 0.2 0.14 11.0 0.2 1.9 1 1 0 1 1 1 0 Haspin like kinase domain NAD_Gly3P_dh_N PF01210.23 ORF117835 - 0.11 12.5 0.0 0.17 11.9 0.0 1.5 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Peptidase_M23 PF01551.22 ORF117608 - 1.8e-31 108.2 2.0 2.5e-31 107.7 0.9 1.7 2 0 0 2 2 2 1 Peptidase family M23 LysM PF01476.20 ORF117608 - 3.7e-16 58.9 0.1 2.8e-15 56.1 0.0 2.3 2 0 0 2 2 2 1 LysM domain Biotin_lipoyl_2 PF13533.6 ORF117608 - 0.00028 20.7 0.0 0.049 13.5 0.0 2.4 2 0 0 2 2 2 2 Biotin-lipoyl like RnfC_N PF13375.6 ORF117608 - 0.006 16.5 0.0 0.1 12.6 0.0 2.5 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain ADPrib_exo_Tox PF03496.14 ORF115526 - 0.22 10.8 0.0 0.32 10.3 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosyltransferase exoenzyme Mito_carr PF00153.27 ORF113262 - 1.6e-37 127.3 0.8 1.3e-16 60.2 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein Headcase PF16002.5 ORF113262 - 0.017 14.6 0.3 0.028 13.9 0.3 1.3 1 0 0 1 1 1 0 Headcase protein CS PF04969.16 ORF110140 - 6.7e-07 30.2 2.8 1e-06 29.7 1.1 2.0 2 0 0 2 2 2 1 CS domain UN_NPL4 PF11543.8 ORF110140 - 0.082 13.4 0.0 0.17 12.4 0.0 1.5 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 HTH_ABP1_N PF18107.1 ORF110140 - 0.11 12.2 0.9 0.21 11.4 0.9 1.5 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain zf-FCS PF06467.14 ORF109950 - 0.21 11.6 17.4 0.12 12.4 3.5 2.9 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif TssN PF17555.2 ORF109756 - 0.029 13.7 7.5 0.053 12.9 7.5 1.4 1 0 0 1 1 1 0 Type VI secretion system, TssN ER_lumen_recept PF00810.18 ORF109756 - 0.037 14.8 5.1 0.066 14.0 5.1 1.4 1 0 0 1 1 1 0 ER lumen protein retaining receptor RES PF08808.11 ORF109756 - 0.039 13.8 0.0 0.058 13.3 0.0 1.2 1 0 0 1 1 1 0 RES domain DUF3328 PF11807.8 ORF109756 - 0.058 13.2 0.0 0.089 12.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3328) DUF2304 PF10066.9 ORF109756 - 4.3 7.6 10.4 2.3 8.5 0.1 2.9 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2304) DUF3810 PF12725.7 ORF109756 - 9.5 5.5 7.3 2.5 7.4 3.9 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3810) mTERF PF02536.14 ORF109363 - 0.21 10.5 0.0 0.3 10.0 0.0 1.1 1 0 0 1 1 1 0 mTERF TMEM71 PF15121.6 ORF108782 - 0.0096 15.6 0.4 0.015 15.0 0.4 1.3 1 0 0 1 1 1 1 TMEM71 protein family PDZ_6 PF17820.1 ORF108402 - 9.6e-06 25.4 0.0 2.8e-05 23.9 0.0 1.8 1 0 0 1 1 1 1 PDZ domain Glutaredoxin PF00462.24 ORF108402 - 0.00034 20.8 0.0 0.0011 19.2 0.0 1.9 2 0 0 2 2 2 1 Glutaredoxin PDZ_2 PF13180.6 ORF108402 - 0.0015 18.8 0.0 0.003 17.8 0.0 1.6 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.24 ORF108402 - 0.0036 17.6 0.1 0.0076 16.6 0.1 1.5 1 0 0 1 1 1 1 PDZ domain Tricorn_PDZ PF14685.6 ORF108402 - 0.027 14.4 0.1 0.12 12.4 0.0 2.1 2 0 0 2 2 2 0 Tricorn protease PDZ domain PDZ_4 PF17816.1 ORF108402 - 0.03 14.7 0.0 0.057 13.8 0.0 1.5 1 0 0 1 1 1 0 PDZ domain Herpes_UL49_5 PF05702.11 ORF107934 - 0.055 13.6 0.3 0.11 12.6 0.3 1.4 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein DUF2576 PF10845.8 NODE_28364_length_761_cov_87.207989_g8109_i2reverse_frame_2 - 0.1 12.2 0.1 0.21 11.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2576) CobD_Cbib PF03186.13 NODE_28364_length_761_cov_87.207989_g8109_i2forward_frame_3 - 0.14 11.3 0.2 0.22 10.7 0.2 1.2 1 0 0 1 1 1 0 CobD/Cbib protein WYL_3 PF18488.1 NODE_28364_length_761_cov_87.207989_g8109_i2forward_frame_2 - 0.00028 21.2 0.9 0.00028 21.2 0.9 1.8 2 0 0 2 2 2 1 WYL domain DAG_kinase_N PF14513.6 NODE_28364_length_761_cov_87.207989_g8109_i2forward_frame_2 - 0.046 13.9 1.2 0.089 13.0 0.1 1.7 2 0 0 2 2 2 0 Diacylglycerol kinase N-terminus SET PF00856.28 NODE_28360_length_761_cov_98.265840_g22313_i0forward_frame_2 - 0.11 12.8 4.0 1.1 9.7 0.0 2.5 2 1 0 2 2 2 0 SET domain DUF4317 PF14199.6 NODE_28345_length_761_cov_247.074380_g22299_i0reverse_frame_2 - 0.012 14.8 0.2 0.017 14.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4317) Forkhead_N PF08430.12 NODE_28345_length_761_cov_247.074380_g22299_i0reverse_frame_2 - 0.25 12.0 26.2 0.41 11.3 26.2 1.3 1 0 0 1 1 1 0 Forkhead N-terminal region Rrf2 PF02082.20 NODE_28345_length_761_cov_247.074380_g22299_i0forward_frame_3 - 0.22 11.9 0.0 31 5.0 0.0 2.2 2 0 0 2 2 2 0 Transcriptional regulator Phage_mat-A PF03863.13 NODE_28336_length_761_cov_1279.935262_g22290_i0forward_frame_3 - 0.25 10.2 0.9 0.36 9.7 0.9 1.1 1 0 0 1 1 1 0 Phage maturation protein DUF1241 PF06840.11 NODE_28325_length_762_cov_2.927098_g22285_i0reverse_frame_3 - 0.024 14.3 1.2 0.055 13.1 1.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) Synaptonemal_3 PF15191.6 NODE_28325_length_762_cov_2.927098_g22285_i0reverse_frame_3 - 0.042 13.6 0.9 0.13 12.0 0.2 2.2 2 0 0 2 2 2 0 Synaptonemal complex central element protein 3 Scaffolding_pro PF11418.8 NODE_28325_length_762_cov_2.927098_g22285_i0reverse_frame_3 - 0.16 12.6 3.1 12 6.5 0.2 2.5 2 0 0 2 2 2 0 Phi29 scaffolding protein Cas9_a PF18470.1 NODE_28325_length_762_cov_2.927098_g22285_i0reverse_frame_3 - 0.43 10.1 4.6 0.095 12.2 0.8 1.9 2 1 0 2 2 2 0 Cas9 alpha-helical lobe domain Pho86 PF11124.8 NODE_28325_length_762_cov_2.927098_g22285_i0forward_frame_3 - 1 8.8 6.0 1.8 8.0 6.0 1.3 1 0 0 1 1 1 0 Inorganic phosphate transporter Pho86 GST_C PF00043.25 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 3.4e-10 40.0 0.0 7.2e-10 39.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 3e-08 33.8 0.1 7.1e-08 32.6 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 1e-05 25.8 0.0 2e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 1.5e-05 25.3 0.0 2.8e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 7.8e-05 22.6 0.0 0.00015 21.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 NODE_28314_length_762_cov_74.152682_g22274_i0forward_frame_2 - 0.00058 20.1 0.0 0.002 18.4 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain DOG1 PF14144.6 NODE_28300_length_762_cov_156.228336_g22260_i0forward_frame_2 - 2.8 8.2 4.7 0.83 9.9 0.3 2.3 2 1 0 2 2 2 0 Seed dormancy control E_Pc_C PF06752.12 NODE_28277_length_762_cov_4178.698762_g21680_i1forward_frame_2 - 1.3 9.0 5.4 1.8 8.6 5.4 1.1 1 0 0 1 1 1 0 Enhancer of Polycomb C-terminus T3SS_needle_E PF08988.10 ORF95997 - 0.22 11.7 1.7 6.5 7.0 0.1 2.4 2 0 0 2 2 2 0 Type III secretion system, cytoplasmic E component of needle ArfGap PF01412.18 ORF94690 - 3.5e-25 88.3 0.0 6e-25 87.6 0.0 1.3 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf BTB PF00651.31 ORF90330 - 0.0034 17.6 0.0 0.0069 16.6 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain ALG3 PF05208.13 ORF90268 - 6.4e-29 101.5 16.7 2.5e-28 99.6 16.7 1.7 1 1 0 1 1 1 1 ALG3 protein DUF1388 PF07142.12 ORF89602 - 3.9 7.5 5.0 5.9 6.9 0.3 2.4 2 0 0 2 2 2 0 Repeat of unknown function (DUF1388) GST_N_3 PF13417.6 ORF82535 - 1.4e-09 38.2 0.0 2.3e-09 37.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF82535 - 1.6e-09 37.8 0.0 3e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF82535 - 1.8e-09 37.8 0.0 4.3e-09 36.6 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF82535 - 2.6e-09 37.1 0.0 5.2e-09 36.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF82535 - 5.8e-05 23.0 0.0 0.00013 21.9 0.0 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF82535 - 0.00016 21.9 0.0 0.00028 21.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain MFS_1 PF07690.16 ORF82013 - 2.5e-22 79.3 35.9 1.3e-19 70.3 18.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 ORF82013 - 1.7e-07 30.5 7.7 1.7e-07 30.5 7.7 2.0 1 1 1 2 2 2 2 MFS_1 like family Nuc_H_symport PF03825.16 ORF82013 - 9e-05 21.6 12.2 0.00012 21.2 12.2 1.2 1 0 0 1 1 1 1 Nucleoside H+ symporter Ig_J_chain PF15097.6 ORF80138 - 0.071 13.0 0.5 0.16 11.9 0.5 1.6 1 0 0 1 1 1 0 Immunoglobulin J chain NVEALA PF14055.6 ORF80138 - 0.1 12.6 0.0 6.3 6.9 0.1 2.4 2 0 0 2 2 2 0 NVEALA protein Tup_N PF08581.10 ORF78652 - 0.017 15.4 10.9 0.017 15.4 10.9 3.3 1 1 3 4 4 4 0 Tup N-terminal COG2 PF06148.11 ORF78652 - 1.9 8.6 19.7 0.59 10.2 8.3 3.0 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF948 PF06103.11 ORF78652 - 3.8 7.8 13.9 0.39 11.0 0.2 2.6 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) TMPIT PF07851.13 ORF78652 - 9.9 5.3 28.2 0.62 9.3 16.5 2.5 1 1 1 2 2 2 0 TMPIT-like protein Exonuc_VII_L PF02601.15 ORF78652 - 9.9 5.6 22.9 4.4e+02 0.2 22.9 2.1 1 1 0 1 1 1 0 Exonuclease VII, large subunit SLC35F PF06027.12 ORF74550 - 5.5e-46 157.4 11.3 6.4e-46 157.2 11.3 1.0 1 0 0 1 1 1 1 Solute carrier family 35 EamA PF00892.20 ORF74550 - 1.2e-08 35.2 10.8 1.2e-06 28.7 3.9 2.2 2 0 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 ORF74550 - 8e-05 22.0 8.2 0.00014 21.2 8.2 1.4 1 1 0 1 1 1 1 UAA transporter family CRT-like PF08627.10 ORF74550 - 0.00046 19.2 0.6 0.00099 18.2 0.2 1.7 1 1 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like PigN PF04987.14 ORF74550 - 0.0037 16.2 8.1 0.24 10.2 1.7 2.2 2 0 0 2 2 2 2 Phosphatidylinositolglycan class N (PIG-N) Ribosomal_L2_C PF03947.18 ORF73405 - 1.2e-41 141.8 6.1 1.8e-41 141.3 6.1 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 ORF73405 - 2.3e-15 56.3 0.3 6.2e-15 54.9 0.3 1.7 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Renin_r PF07850.14 ORF69634 - 0.012 16.2 0.0 0.025 15.2 0.0 1.5 1 0 0 1 1 1 0 Renin receptor-like protein zf-RanBP PF00641.18 ORF67186 - 0.025 13.9 2.6 0.057 12.7 2.6 1.7 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others Vps36-NZF-N PF16988.5 ORF67186 - 0.64 9.5 5.4 3.5 7.1 5.4 2.1 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain RecR PF02132.15 ORF67186 - 1.1 8.9 5.3 0.69 9.5 2.5 2.1 2 0 0 2 2 2 0 RecR protein DUF1548 PF07579.11 ORF60404 - 0.12 12.7 2.2 0.2 12.0 1.1 1.9 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1548) DUF3645 PF12359.8 ORF59268 - 0.059 12.8 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3645) SOR_SNZ PF01680.17 ORF59268 - 0.23 11.2 0.0 0.33 10.7 0.0 1.2 1 0 0 1 1 1 0 SOR/SNZ family Med12-PQL PF12144.8 ORF5878 - 0.0088 16.0 2.6 0.0088 16.0 2.6 1.8 2 0 0 2 2 2 1 Eukaryotic Mediator 12 catenin-binding domain Peptidase_M15_2 PF05951.13 ORF5878 - 0.13 11.9 4.6 1.9 8.1 0.5 2.4 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF882) WW PF00397.26 ORF58252 - 2.1e-10 40.5 1.9 3.4e-10 39.8 1.9 1.4 1 0 0 1 1 1 1 WW domain Glyco_hydro_5_C PF18564.1 ORF57602 - 5.5e-07 30.0 0.2 9.3e-07 29.3 0.2 1.4 1 0 0 1 1 1 1 Glycoside hydrolase family 5 C-terminal domain Cellulase PF00150.18 ORF57602 - 1.6e-06 27.8 0.0 2.1e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Enterotoxin_HS1 PF08090.11 ORF56792 - 0.045 13.7 0.5 0.11 12.5 0.5 1.7 1 0 0 1 1 1 0 Heat stable E.coli enterotoxin 1 WWE PF02825.20 ORF55351 - 2.6e-08 34.3 0.3 3.8e-08 33.8 0.3 1.2 1 0 0 1 1 1 1 WWE domain DEC-1_N PF04625.13 ORF55351 - 0.64 9.0 7.5 0.81 8.6 7.5 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Ribophorin_I PF04597.14 ORF5410 - 5.6e-69 233.4 3.5 6.4e-69 233.2 3.5 1.0 1 0 0 1 1 1 1 Ribophorin I Hanta_G1 PF01567.16 ORF5410 - 0.0038 16.0 0.2 0.0052 15.5 0.2 1.1 1 0 0 1 1 1 1 Hantavirus glycoprotein G1 2OG-FeII_Oxy_3 PF13640.6 ORF50651 - 0.042 14.7 0.0 0.081 13.8 0.0 1.5 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily EGF_2 PF07974.13 ORF50362 - 0.00036 20.8 7.1 0.00036 20.8 7.1 4.6 4 2 0 4 4 4 2 EGF-like domain DUF1877 PF08974.10 ORF50362 - 0.16 12.0 0.0 0.26 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1877) Arf PF00025.21 ORF49329 - 3.4e-60 202.5 0.1 4.2e-60 202.2 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF49329 - 3.3e-09 37.0 0.0 4.7e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF49329 - 3.3e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF49329 - 3.8e-08 33.1 0.0 4.7e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF49329 - 9.3e-08 31.6 0.3 0.00013 21.3 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF49329 - 7.3e-06 25.5 0.0 9.4e-06 25.1 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF49329 - 0.017 15.2 0.0 0.048 13.7 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase Glyco_hydro_16 PF00722.21 ORF49235 - 1.5e-23 83.2 0.1 1.9e-23 82.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 SKN1 PF03935.15 ORF49235 - 0.0082 14.6 0.1 0.017 13.6 0.1 1.3 1 1 0 1 1 1 1 Beta-glucan synthesis-associated protein (SKN1) DUF4860 PF16152.5 ORF42986 - 0.0016 18.2 0.4 0.0057 16.5 0.4 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4860) DUF3836 PF12930.7 ORF42986 - 0.36 10.6 5.5 0.16 11.8 1.5 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF3836) DUF4358 PF14270.6 ORF42986 - 1.8 8.9 8.4 1.7 9.0 0.6 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4358) CorA PF01544.18 ORF42986 - 7.9 5.7 10.0 0.91 8.8 5.1 1.9 2 1 0 2 2 2 0 CorA-like Mg2+ transporter protein Hydrolase_4 PF12146.8 ORF40935 - 4.8e-07 29.3 0.0 9.8e-07 28.3 0.0 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF40935 - 6.2e-07 29.3 0.1 1.7e-06 27.9 0.1 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold Cutinase PF01083.22 ORF40935 - 0.012 15.5 0.1 0.029 14.3 0.0 1.5 1 1 1 2 2 2 0 Cutinase Metallophos PF00149.28 ORF38927 - 3.3e-25 89.8 0.0 4.3e-25 89.4 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF1548 PF07579.11 ORF37183 - 0.12 12.7 2.2 0.2 12.0 1.1 1.9 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1548) SSP160 PF06933.11 ORF34630 - 0.038 12.2 8.4 0.051 11.8 8.4 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Mucin PF01456.17 ORF34630 - 0.74 9.8 13.1 1.1 9.2 13.1 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF5541 PF17695.1 ORF34269 - 0.097 13.1 5.9 3.2 8.2 0.6 2.8 1 1 1 2 2 2 0 Family of unknown function (DUF5541) PI3_PI4_kinase PF00454.27 ORF3343 - 8.7e-29 101.1 0.0 1.4e-28 100.4 0.0 1.3 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase FATC PF02260.20 ORF3343 - 6.8e-11 41.8 0.0 6.8e-11 41.8 0.0 1.8 2 0 0 2 2 2 1 FATC domain DUF4715 PF15835.5 ORF3343 - 0.068 13.2 0.2 0.11 12.6 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4715) Carb_anhydrase PF00194.21 ORF33329 - 7.2e-13 48.7 0.3 6.4e-12 45.6 0.3 1.9 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Ank_2 PF12796.7 ORF31887 - 7.3e-11 42.5 0.0 3.7e-10 40.2 0.0 2.1 2 1 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF31887 - 2.3e-09 37.6 0.1 0.00023 21.7 0.0 2.8 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF31887 - 2.2e-08 34.2 0.0 2.4e-05 24.5 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF31887 - 9.4e-08 31.8 0.0 0.011 16.1 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF31887 - 1.6e-07 31.4 0.0 0.0022 18.4 0.0 3.4 4 0 0 4 4 4 2 Ankyrin repeat RsdA_SigD_bd PF16751.5 ORF31887 - 0.12 12.6 0.1 0.32 11.3 0.1 1.7 1 0 0 1 1 1 0 Anti-sigma-D factor RsdA to sigma factor binding region PAPS_reduct PF01507.19 ORF29120 - 8.2e-24 84.6 0.0 2e-16 60.6 0.0 2.2 1 1 1 2 2 2 2 Phosphoadenosine phosphosulfate reductase family TTL PF03133.15 ORF28722 - 1.8e-42 145.5 8.3 5.9e-42 143.8 8.3 1.7 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF28722 - 2.6e-07 30.2 0.2 0.00024 20.4 0.0 2.3 2 1 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF28722 - 0.00029 20.2 0.0 0.001 18.4 0.0 1.8 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF28722 - 0.021 14.3 0.5 0.039 13.5 0.5 1.5 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus DUF4460 PF14687.6 ORF28722 - 0.046 13.8 0.2 0.089 12.9 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) Autoind_synth PF00765.17 ORF28722 - 0.049 13.2 0.1 0.085 12.4 0.1 1.3 1 0 0 1 1 1 0 Autoinducer synthase T3SS_needle_E PF08988.10 ORF24786 - 0.22 11.7 1.7 6.5 7.0 0.1 2.4 2 0 0 2 2 2 0 Type III secretion system, cytoplasmic E component of needle FoP_duplication PF13865.6 ORF23754 - 3e-08 34.1 9.4 3e-08 34.1 9.4 4.2 2 1 1 3 3 3 1 C-terminal duplication domain of Friend of PRMT1 Scramblase PF03803.15 ORF2098 - 2.6e-11 43.2 0.1 3.6e-11 42.8 0.1 1.1 1 0 0 1 1 1 1 Scramblase T3SS_needle_E PF08988.10 ORF20590 - 0.22 11.7 1.7 6.5 7.0 0.1 2.4 2 0 0 2 2 2 0 Type III secretion system, cytoplasmic E component of needle MitMem_reg PF13012.6 ORF150826 - 2e-30 105.5 0.1 3.7e-30 104.6 0.1 1.4 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 ORF150826 - 2e-08 34.2 3.1 5.7e-08 32.8 0.0 2.5 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease AAA_23 PF13476.6 ORF150826 - 0.0048 17.4 7.2 0.0062 17.1 7.2 1.2 1 0 0 1 1 1 1 AAA domain Phyto_Pns9_10 PF05878.11 ORF150826 - 0.0058 15.8 0.9 0.54 9.3 0.2 2.1 1 1 1 2 2 2 2 Phytoreovirus nonstructural protein Pns9/Pns10 DUF1682 PF07946.14 ORF150826 - 0.012 14.8 5.3 0.018 14.3 5.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) FYDLN_acid PF09538.10 ORF150826 - 0.013 16.1 4.4 4.2 8.1 5.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) MscS_TM PF12794.7 ORF150826 - 0.097 11.5 0.3 0.13 11.1 0.3 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Connexin PF00029.19 ORF150826 - 0.28 10.9 1.7 0.37 10.5 1.7 1.2 1 0 0 1 1 1 0 Connexin DUF2070 PF09843.9 ORF145960 - 2.6 6.2 8.7 3.6 5.8 8.7 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Gemini_mov PF01708.16 ORF145960 - 4.4 7.1 0.0 4.4 7.1 0.0 2.9 3 0 0 3 3 3 0 Geminivirus putative movement protein FoP_duplication PF13865.6 ORF143195 - 3e-08 34.1 9.4 3e-08 34.1 9.4 4.2 2 1 1 3 3 3 1 C-terminal duplication domain of Friend of PRMT1 Molybdopterin PF00384.22 ORF14302 - 8.4e-31 107.4 0.0 1.4e-30 106.7 0.0 1.3 1 0 0 1 1 1 1 Molybdopterin oxidoreductase NADH_dhqG_C PF09326.11 ORF14302 - 1.5e-15 57.6 0.0 2.6e-15 56.8 0.0 1.4 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase subunit G, C-terminal Trypsin_2 PF13365.6 ORF14302 - 0.055 14.4 0.0 1.4 9.8 0.0 2.1 1 1 1 2 2 2 0 Trypsin-like peptidase domain Tcf25 PF04910.14 ORF141395 - 3.8e-05 22.9 0.0 4.4e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Transcriptional repressor TCF25 Cys_Knot_tox PF17486.2 ORF141395 - 0.069 13.4 0.6 0.12 12.6 0.6 1.4 1 0 0 1 1 1 0 Cystine knot toxins Aa_trans PF01490.18 ORF139759 - 3.8e-12 45.6 0.1 4.9e-12 45.3 0.1 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein GnRH PF00446.17 ORF139759 - 0.3 11.6 0.1 0.3 11.6 0.1 3.1 3 0 0 3 3 3 0 Gonadotropin-releasing hormone Sas6_CC PF18594.1 ORF139419 - 0.068 13.0 2.9 1.9 8.4 0.1 2.5 2 0 0 2 2 2 0 Sas6/XLF/XRCC4 coiled-coil domain MCU PF04678.13 ORF139419 - 0.42 10.7 3.1 0.79 9.8 3.1 1.4 1 1 0 1 1 1 0 Mitochondrial calcium uniporter CS PF04969.16 ORF133817 - 1.4e-12 48.4 0.4 3e-12 47.4 0.4 1.6 1 0 0 1 1 1 1 CS domain EF1_GNE PF00736.19 ORF133817 - 0.031 14.4 0.0 0.57 10.4 0.0 2.3 2 0 0 2 2 2 0 EF-1 guanine nucleotide exchange domain BiPBP_C PF06832.12 ORF133817 - 0.15 12.1 0.0 16 5.6 0.0 2.5 2 1 0 2 2 2 0 Penicillin-Binding Protein C-terminus Family DUF4922 PF16269.5 ORF130307 - 0.048 13.4 0.1 0.11 12.3 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4922) HIT PF01230.23 ORF130307 - 0.13 13.0 0.2 0.4 11.5 0.2 1.8 1 1 0 1 1 1 0 HIT domain Arf PF00025.21 ORF128858 - 3.4e-60 202.5 0.1 4.2e-60 202.2 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF128858 - 3.3e-09 37.0 0.0 4.7e-09 36.5 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF128858 - 3.3e-09 36.4 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF128858 - 3.8e-08 33.1 0.0 4.7e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF128858 - 9.3e-08 31.6 0.3 0.00013 21.3 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF128858 - 7.3e-06 25.5 0.0 9.4e-06 25.1 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF128858 - 0.017 15.2 0.0 0.048 13.7 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase Aminotran_1_2 PF00155.21 ORF127816 - 2.3e-37 129.0 0.0 2.9e-37 128.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF127816 - 0.022 13.7 0.1 0.067 12.1 0.0 1.8 2 1 0 2 2 2 0 Aminotransferase class-V Peptidase_S10 PF00450.22 ORF126051 - 2e-30 106.5 0.7 2.4e-30 106.3 0.7 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Jacalin PF01419.17 ORF125876 - 0.00054 19.9 1.2 0.042 13.8 0.8 2.4 2 0 0 2 2 2 2 Jacalin-like lectin domain DUF2294 PF10057.9 ORF125876 - 0.041 14.0 0.3 0.07 13.3 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2294) Transferase PF02458.15 ORF124445 - 0.035 12.7 0.0 0.052 12.2 0.0 1.2 1 0 0 1 1 1 0 Transferase family MFS_1 PF07690.16 ORF120096 - 2.4e-12 46.5 31.3 2e-09 36.9 11.5 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 ORF120096 - 8.6e-06 24.6 13.0 1.2e-05 24.1 13.0 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein Yip1 PF04893.17 ORF118991 - 1.8e-08 34.3 8.4 2.8e-08 33.7 8.4 1.2 1 0 0 1 1 1 1 Yip1 domain SHIPPO-rpt PF07004.12 ORF118581 - 0.0057 17.5 4.6 16 6.6 0.1 4.3 4 0 0 4 4 4 2 Sperm-tail PG-rich repeat RS4NT PF08071.12 ORF118581 - 1.1 9.4 8.3 54 4.0 0.0 4.3 3 0 0 3 3 3 0 RS4NT (NUC023) domain cobW PF02492.19 ORF116628 - 5.7e-35 120.5 0.0 7.9e-35 120.0 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Arf PF00025.21 ORF116628 - 0.0066 15.9 0.0 0.053 13.0 0.0 2.0 2 0 0 2 2 2 1 ADP-ribosylation factor family Zeta_toxin PF06414.12 ORF116628 - 0.024 13.9 0.0 0.032 13.5 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 ORF116628 - 0.048 14.0 0.0 0.065 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 ORF116628 - 0.062 13.2 0.1 0.2 11.6 0.1 2.0 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_16 PF13191.6 ORF116628 - 0.11 12.8 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain Viral_helicase1 PF01443.18 ORF116628 - 0.12 12.0 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Peripla_BP_6 PF13458.6 ORF116628 - 0.16 11.6 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein CTP_transf_like PF01467.26 ORF115426 - 4.9e-12 46.3 0.0 7.2e-12 45.7 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like YoeB_toxin PF06769.14 ORF114634 - 0.15 12.1 0.0 0.3 11.1 0.0 1.4 1 0 0 1 1 1 0 YoeB-like toxin of bacterial type II toxin-antitoxin system Thioredoxin PF00085.20 ORF114162 - 3.1e-06 27.1 0.0 6.9e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin YpjP PF14005.6 ORF114162 - 3.7 7.6 8.2 4 7.5 2.6 2.3 2 0 0 2 2 2 0 YpjP-like protein DUF5446 PF17522.2 ORF113098 - 0.088 13.0 3.7 0.33 11.1 0.8 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5446) Helo_like_N PF17111.5 ORF113098 - 0.22 10.9 3.6 3.7 6.9 1.5 2.3 2 0 0 2 2 2 0 Fungal N-terminal domain of STAND proteins PRP1_N PF06424.12 ORF113098 - 0.39 11.1 9.4 0.54 10.7 1.5 2.2 2 0 0 2 2 2 0 PRP1 splicing factor, N-terminal Cnn_1N PF07989.11 ORF113098 - 4.1 7.6 8.6 3.1 8.0 4.4 2.4 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 SEP PF08059.13 ORF106726 - 5.6e-25 87.7 0.0 1.9e-24 86.0 0.0 1.9 2 0 0 2 2 2 1 SEP domain UBX PF00789.20 ORF106726 - 3.6e-14 52.7 0.0 9.4e-14 51.4 0.0 1.7 2 0 0 2 2 2 1 UBX domain RE_MjaI PF09568.10 ORF106726 - 0.027 14.3 0.1 0.051 13.4 0.1 1.4 1 0 0 1 1 1 0 MjaI restriction endonuclease # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks82.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks82.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks82.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks82.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:09 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DEP PF00610.21 ORF105487 - 0.043 13.9 0.0 0.11 12.6 0.0 1.6 1 0 0 1 1 1 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) DUF3528 PF12045.8 ORF105487 - 0.053 14.1 0.1 0.17 12.5 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3528) Scramblase PF03803.15 ORF101747 - 2.6e-11 43.2 0.1 3.6e-11 42.8 0.1 1.1 1 0 0 1 1 1 1 Scramblase MIP PF00230.20 ORF101197 - 1.2e-21 77.4 6.9 1.6e-21 77.0 6.9 1.2 1 0 0 1 1 1 1 Major intrinsic protein STAR_dimer PF16544.5 ORF10022 - 0.17 11.5 0.0 0.3 10.7 0.0 1.3 1 0 0 1 1 1 0 Homodimerisation region of STAR domain protein Mob1_phocein PF03637.17 NODE_28540_length_756_cov_734.857143_g20467_i1forward_frame_1 - 2.4e-70 236.0 1.0 2.9e-70 235.7 1.0 1.1 1 0 0 1 1 1 1 Mob1/phocein family DUF5595 PF18077.1 NODE_28540_length_756_cov_734.857143_g20467_i1forward_frame_1 - 1.6 8.8 5.1 0.71 10.0 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF5595) Spc7 PF08317.11 NODE_28493_length_758_cov_94.239281_g22430_i0reverse_frame_3 - 0.099 11.5 11.2 0.15 10.9 11.2 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Mss4 PF04421.13 NODE_28493_length_758_cov_94.239281_g22430_i0reverse_frame_3 - 0.23 11.6 2.5 0.63 10.2 0.0 2.4 2 1 0 2 2 2 0 Mss4 protein SlyX PF04102.12 NODE_28493_length_758_cov_94.239281_g22430_i0reverse_frame_3 - 0.4 11.3 4.2 1.4 9.6 4.2 2.0 1 1 0 1 1 1 0 SlyX UvrD_C PF13361.6 NODE_28493_length_758_cov_94.239281_g22430_i0reverse_frame_3 - 0.72 9.2 8.9 1 8.7 8.9 1.2 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain Phage_integrase PF00589.22 NODE_28458_length_759_cov_3.237569_g22401_i0forward_frame_3 - 0.00013 21.8 0.0 0.00018 21.3 0.0 1.3 1 0 0 1 1 1 1 Phage integrase family adh_short PF00106.25 NODE_28441_length_759_cov_122.859116_g22385_i0reverse_frame_2 - 7e-13 48.5 0.0 2.4e-08 33.7 0.0 2.3 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_28441_length_759_cov_122.859116_g22385_i0reverse_frame_2 - 2.7e-07 30.4 0.0 4.1e-06 26.5 0.0 2.0 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Vps26 PF03643.15 ORF99362 - 9.1e-20 70.8 4.6 9.5e-19 67.5 4.6 1.9 1 1 0 1 1 1 1 Vacuolar protein sorting-associated protein 26 DUF884 PF05959.11 ORF99111 - 0.22 11.1 0.1 21 4.7 0.0 2.1 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF884) DUF2730 PF10805.8 ORF98968 - 0.0018 18.3 6.6 0.033 14.3 1.0 3.8 1 1 4 5 5 5 2 Protein of unknown function (DUF2730) Baculo_PEP_C PF04513.12 ORF98968 - 0.007 16.4 11.2 0.13 12.2 10.0 2.7 1 1 1 2 2 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus Filament PF00038.21 ORF98968 - 0.0094 15.6 9.0 2.6 7.6 7.4 2.5 1 1 1 2 2 2 2 Intermediate filament protein Phage_GP20 PF06810.11 ORF98968 - 0.018 14.9 9.9 0.3 10.9 5.1 2.7 2 1 0 2 2 2 0 Phage minor structural protein GP20 Nsp1_C PF05064.13 ORF98968 - 0.023 14.5 10.4 0.072 12.9 8.2 2.8 1 1 0 2 2 2 0 Nsp1-like C-terminal region DUF4533 PF15047.6 ORF98968 - 0.053 13.1 3.2 2.1 7.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4533) She9_MDM33 PF05546.11 ORF98968 - 0.48 10.2 4.4 0.66 9.7 2.7 2.0 2 1 1 3 3 3 0 She9 / Mdm33 family Spc7 PF08317.11 ORF98968 - 0.61 8.9 10.7 1.1 8.1 7.9 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein CCDC-167 PF15188.6 ORF98968 - 1.7 9.0 4.1 4.2 7.8 1.8 2.8 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 Snapin_Pallidin PF14712.6 ORF98968 - 9.2 6.8 11.1 16 6.0 4.5 3.3 2 1 1 4 4 4 0 Snapin/Pallidin TraF_2 PF13729.6 ORF98926 - 0.05 13.0 3.5 1.1 8.6 0.5 2.3 2 0 0 2 2 2 0 F plasmid transfer operon, TraF, protein DUF2183 PF09949.9 ORF98926 - 0.052 13.9 0.4 0.14 12.5 0.4 1.7 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2183) Tox-HDC PF15656.6 ORF98926 - 0.053 13.7 1.6 0.13 12.4 1.6 1.7 1 1 0 1 1 1 0 Toxin with a H, D/N and C signature JIP_LZII PF16471.5 ORF98926 - 0.089 13.0 7.4 0.16 12.1 0.1 3.1 2 1 1 3 3 3 0 JNK-interacting protein leucine zipper II FAM76 PF16046.5 ORF98926 - 0.45 9.8 22.9 0.64 9.3 17.0 2.0 1 1 1 2 2 2 0 FAM76 protein DUF725 PF05267.12 ORF98926 - 0.46 10.5 6.7 0.057 13.4 1.5 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF725) CdvA PF18822.1 ORF98926 - 0.54 10.1 16.6 0.62 9.9 7.1 3.0 3 0 0 3 3 3 0 CdvA-like coiled-coil domain TMPIT PF07851.13 ORF98926 - 1.9 7.7 9.5 2.7 7.2 9.3 1.5 1 1 0 1 1 1 0 TMPIT-like protein Uso1_p115_C PF04871.13 ORF98926 - 1.9 8.9 16.6 0.11 12.8 6.4 2.8 2 1 1 3 3 3 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF4407 PF14362.6 ORF98926 - 1.9 7.7 8.5 3.2 7.0 8.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Proteasome PF00227.26 ORF97111 - 2.3e-39 134.9 0.0 3.1e-39 134.4 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF97111 - 3.9e-06 26.4 0.1 3.9e-06 26.4 0.1 1.9 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Pkinase PF00069.25 ORF96386 - 4.5e-34 118.0 0.1 5.9e-34 117.6 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF96386 - 4.7e-15 55.6 0.1 6.3e-15 55.2 0.1 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF96386 - 0.00077 18.5 0.1 0.0012 17.9 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 ORF96386 - 0.024 14.0 0.0 0.038 13.3 0.0 1.3 1 0 0 1 1 1 0 Kinase-like NPP PF08384.10 ORF96386 - 0.061 13.4 1.6 0.1 12.7 0.7 1.8 2 0 0 2 2 2 0 Pro-opiomelanocortin, N-terminal region zf-HC5HC2H PF13771.6 ORF95134 - 0.032 14.5 6.5 0.032 14.5 6.5 2.4 2 0 0 2 2 2 0 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 ORF95134 - 0.29 11.3 12.7 0.072 13.3 4.4 2.2 2 0 0 2 2 2 0 PHD-zinc-finger like domain Proteasome PF00227.26 ORF94887 - 2.3e-39 134.9 0.0 3.1e-39 134.4 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF94887 - 3.9e-06 26.4 0.1 3.9e-06 26.4 0.1 1.9 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Sulfotransfer_1 PF00685.27 ORF83203 - 0.00028 20.4 0.0 0.0004 19.9 0.0 1.2 1 0 0 1 1 1 1 Sulfotransferase domain DUF3187 PF11383.8 ORF83203 - 0.005 16.1 0.3 0.007 15.6 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3187) Ephrin_rec_like PF07699.13 ORF81154 - 6e-25 86.7 41.1 2.5e-09 36.8 2.2 5.7 1 1 5 6 6 6 6 Putative ephrin-receptor like NCD3G PF07562.14 ORF81154 - 1.3e-08 34.7 34.8 0.014 15.4 0.9 6.4 1 1 8 9 9 9 8 Nine Cysteines Domain of family 3 GPCR PknG_rubred PF16919.5 ORF81154 - 0.048 13.8 1.8 0.048 13.8 1.8 3.4 4 0 0 4 4 4 0 Protein kinase G rubredoxin domain DUF1840 PF08895.11 ORF81154 - 0.1 13.0 1.0 0.15 12.4 1.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1840) TNFR_c6 PF00020.18 ORF81154 - 0.37 11.2 33.8 0.62 10.5 1.2 6.9 2 2 7 9 9 9 0 TNFR/NGFR cysteine-rich region Ribosomal_60s PF00428.19 ORF81154 - 3 8.5 11.4 9.3 6.9 11.4 1.8 1 0 0 1 1 1 0 60s Acidic ribosomal protein DUF2475 PF10629.9 ORF80848 - 3e-07 30.6 6.4 0.00019 21.6 0.6 3.5 2 2 1 3 3 3 2 Protein of unknown function (DUF2475) UBD PF16455.5 ORF79561 - 1.3e-16 60.7 0.0 2.3e-16 59.9 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-binding domain Rad60-SLD PF11976.8 ORF79561 - 7.8e-06 25.6 0.1 1.3e-05 24.9 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 ORF79561 - 2.9e-05 23.7 0.0 5.2e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family PPR_2 PF13041.6 ORF79488 - 6.4e-11 42.3 0.0 0.017 15.3 0.0 4.7 5 0 0 5 5 5 3 PPR repeat family PPR PF01535.20 ORF79488 - 7.9e-07 28.9 0.0 0.00044 20.3 0.0 4.3 4 0 0 4 4 4 1 PPR repeat PPR_3 PF13812.6 ORF79488 - 0.00011 22.1 0.0 8.9 6.5 0.0 4.0 3 2 2 5 5 5 2 Pentatricopeptide repeat domain MEIOC PF15189.6 ORF79488 - 0.12 12.0 0.8 0.53 9.9 0.3 1.9 2 0 0 2 2 2 0 Meiosis-specific coiled-coil domain-containing protein MEIOC PPR_1 PF12854.7 ORF79488 - 0.15 11.8 0.0 7.2 6.4 0.0 2.9 3 0 0 3 3 3 0 PPR repeat Thymidylate_kin PF02223.17 ORF76929 - 0.00072 19.3 0.0 0.0093 15.7 0.0 2.2 1 1 0 1 1 1 1 Thymidylate kinase NACHT PF05729.12 ORF76929 - 0.00088 19.2 0.0 0.0037 17.2 0.0 2.0 1 1 0 1 1 1 1 NACHT domain AAA_22 PF13401.6 ORF76929 - 0.0027 18.0 0.0 0.0044 17.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 ORF76929 - 0.0043 17.6 0.0 0.0097 16.4 0.0 1.6 2 0 0 2 2 2 1 ABC transporter DUF87 PF01935.17 ORF76929 - 0.016 15.3 0.0 0.025 14.7 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain RNA_helicase PF00910.22 ORF76929 - 0.02 15.3 0.0 0.033 14.6 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 ORF76929 - 0.021 15.3 0.0 0.039 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 ORF76929 - 0.024 14.8 0.0 0.037 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 ORF76929 - 0.025 14.8 0.0 0.059 13.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain Ploopntkinase3 PF18751.1 ORF76929 - 0.03 14.2 0.0 0.047 13.6 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 MobB PF03205.14 ORF76929 - 0.03 14.2 0.0 0.065 13.1 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B MMR_HSR1 PF01926.23 ORF76929 - 0.031 14.4 0.0 0.057 13.5 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase NB-ARC PF00931.22 ORF76929 - 0.062 12.5 0.0 0.092 11.9 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain DUF463 PF04317.12 ORF76929 - 0.084 11.8 0.0 0.4 9.6 0.0 1.9 1 1 1 2 2 2 0 YcjX-like family, DUF463 SRP54 PF00448.22 ORF76929 - 0.089 12.4 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_29 PF13555.6 ORF76929 - 0.097 12.4 0.0 0.27 11.0 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain Pox_A32 PF04665.12 ORF76929 - 0.11 11.9 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Poxvirus A32 protein ATPase_2 PF01637.18 ORF76929 - 0.13 12.2 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_16 PF13191.6 ORF76929 - 0.13 12.6 0.2 0.36 11.2 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain FtsK_SpoIIIE PF01580.18 ORF76929 - 0.15 11.4 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family RsgA_GTPase PF03193.16 ORF76929 - 0.15 12.0 0.1 0.34 10.8 0.1 1.5 2 0 0 2 2 2 0 RsgA GTPase SMC_N PF02463.19 ORF76929 - 0.19 11.2 0.0 0.41 10.0 0.0 1.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Arf PF00025.21 ORF76929 - 0.22 11.0 0.0 0.37 10.2 0.0 1.3 1 0 0 1 1 1 0 ADP-ribosylation factor family MORN PF02493.20 ORF75895 - 3.5e-26 89.5 49.6 8.2e-08 31.7 1.4 7.6 8 0 0 8 8 8 5 MORN repeat PapD_N PF00345.20 ORF71383 - 2.1e-36 124.6 1.7 3.1e-36 124.0 1.7 1.3 1 0 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 ORF71383 - 3.3e-08 33.7 2.8 5e-08 33.2 1.6 1.9 2 0 0 2 2 2 1 Pili assembly chaperone PapD, C-terminal domain G2F PF07474.12 ORF66742 - 0.044 13.6 1.5 0.065 13.0 1.0 1.5 1 1 0 1 1 1 0 G2F domain DUF2475 PF10629.9 ORF646 - 3e-07 30.6 6.4 0.00019 21.6 0.6 3.5 2 2 1 3 3 3 2 Protein of unknown function (DUF2475) zf-TFIIIC PF12660.7 ORF63202 - 0.0013 18.6 0.6 0.003 17.5 0.6 1.6 1 0 0 1 1 1 1 Putative zinc-finger of transcription factor IIIC complex Ank_4 PF13637.6 ORF6203 - 3.3e-24 84.9 0.5 3.5e-09 37.0 0.0 3.5 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF6203 - 9e-22 77.5 0.4 1.5e-13 51.1 0.1 2.6 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF6203 - 4.1e-13 48.2 0.0 0.00075 19.8 0.0 4.5 4 0 0 4 4 4 2 Ankyrin repeat Ank PF00023.30 ORF6203 - 4.2e-13 49.1 0.3 0.0028 18.0 0.0 4.3 4 0 0 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF6203 - 1.4e-12 47.6 0.0 1.8e-07 31.3 0.0 3.4 1 1 2 3 3 3 2 Ankyrin repeats (many copies) STI1 PF17830.1 ORF6203 - 5.4e-08 32.7 0.1 0.00012 22.0 0.2 2.5 2 0 0 2 2 2 2 STI1 domain MHB PF16525.5 ORF6203 - 0.05 13.9 0.2 1.4 9.2 0.0 2.7 2 1 1 3 3 3 0 Haemophore, haem-binding DUF4581 PF15167.6 ORF6203 - 0.093 12.9 0.0 0.25 11.5 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4581) MC1 PF05854.11 ORF59344 - 0.061 13.6 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Non-histone chromosomal protein MC1 Patched PF02460.18 ORF58809 - 1.9e-31 109.0 12.9 2.2e-31 108.8 12.9 1.0 1 0 0 1 1 1 1 Patched family ACR_tran PF00873.19 ORF58809 - 2.7e-06 25.4 10.9 3.2e-06 25.1 10.9 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MMPL PF03176.15 ORF58809 - 0.29 10.0 8.8 0.36 9.7 8.8 1.2 1 0 0 1 1 1 0 MMPL family YfhO PF09586.10 ORF58809 - 1.6 6.9 12.2 2.9 6.0 0.4 2.0 2 0 0 2 2 2 0 Bacterial membrane protein YfhO HAD_2 PF13419.6 ORF58645 - 3e-37 128.4 0.0 5.3e-37 127.6 0.0 1.4 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF58645 - 5.4e-27 95.5 0.1 6.5e-27 95.2 0.1 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF58645 - 2.7e-14 54.0 0.1 1e-13 52.1 0.1 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF58645 - 1.4e-10 41.1 0.0 3.6e-10 39.8 0.0 1.7 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_3 PF08282.12 ORF58645 - 1.3e-06 28.3 0.0 0.092 12.5 0.0 3.1 3 0 0 3 3 3 3 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF58645 - 0.00029 20.9 0.0 0.036 14.2 0.0 2.4 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Acid_PPase PF12689.7 ORF58645 - 0.049 13.5 0.0 0.63 9.9 0.0 2.3 2 1 0 2 2 2 0 Acid Phosphatase Put_Phosphatase PF06888.12 ORF58645 - 0.1 12.0 0.0 3.9 6.8 0.0 2.7 3 0 0 3 3 3 0 Putative Phosphatase S6PP PF05116.13 ORF58645 - 0.14 11.6 0.0 0.55 9.7 0.0 1.8 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase Myb_DNA-binding PF00249.31 ORF57508 - 6.6e-08 32.6 0.0 1.1e-07 31.9 0.0 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 ORF57508 - 0.033 14.4 0.2 0.1 12.8 0.0 2.0 2 0 0 2 2 2 0 Myb-like DNA-binding domain Pkinase PF00069.25 ORF547 - 9e-30 103.9 1.7 1.4e-29 103.3 1.7 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF547 - 3e-14 52.9 0.4 4.7e-14 52.3 0.4 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase PRCH PF03967.13 ORF547 - 0.075 13.3 0.0 0.35 11.1 0.0 2.0 2 0 0 2 2 2 0 Photosynthetic reaction centre, H-chain N-terminal region DUF2312 PF10073.9 ORF547 - 0.87 9.3 9.6 1.2 8.9 0.4 3.4 3 1 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) PapD_N PF00345.20 ORF54056 - 2.1e-37 127.8 2.6 6.1e-37 126.3 0.6 2.2 2 0 0 2 2 2 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain PapD_C PF02753.17 ORF54056 - 9.4e-10 38.7 2.0 2.5e-09 37.3 2.0 1.8 1 0 0 1 1 1 1 Pili assembly chaperone PapD, C-terminal domain zf-CCCH_2 PF14608.6 ORF52451 - 0.00061 20.2 0.9 0.00061 20.2 0.9 2.2 2 0 0 2 2 2 1 RNA-binding, Nab2-type zinc finger Myb_DNA-binding PF00249.31 ORF4679 - 1.6e-10 41.0 0.6 3.1e-10 40.1 0.6 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Mgr1 PF08602.10 ORF4679 - 0.0063 15.4 0.0 0.012 14.5 0.0 1.4 1 0 0 1 1 1 1 Mgr1-like, i-AAA protease complex subunit Myb_DNA-bind_7 PF15963.5 ORF4679 - 0.019 14.8 1.3 0.019 14.8 1.3 1.8 1 1 0 1 1 1 0 Myb DNA-binding like Ntox27 PF15531.6 ORF4679 - 0.15 12.0 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial toxin 27 zinc-ribbons_6 PF07191.12 ORF4460 - 0.63 10.1 3.8 1.5 8.9 2.9 2.0 1 1 0 1 1 1 0 zinc-ribbons MORN PF02493.20 ORF39239 - 3.5e-26 89.5 49.6 8.2e-08 31.7 1.4 7.6 8 0 0 8 8 8 5 MORN repeat Proton_antipo_M PF00361.20 ORF35315 - 0.00034 19.9 1.6 0.00034 19.9 1.6 1.9 2 0 0 2 2 2 1 Proton-conducting membrane transporter CPP1-like PF11833.8 ORF35315 - 0.85 9.2 2.8 0.95 9.1 0.9 1.8 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like NAM-associated PF14303.6 ORF31776 - 0.0029 18.3 3.3 0.0042 17.8 3.3 1.3 1 0 0 1 1 1 1 No apical meristem-associated C-terminal domain RecO_C PF02565.15 ORF31762 - 1.4e-23 83.5 0.1 3.9e-23 82.0 0.1 1.7 1 1 0 1 1 1 1 Recombination protein O C terminal RecO_N PF11967.8 ORF31762 - 8.5e-23 80.1 0.0 1.4e-22 79.4 0.0 1.4 1 0 0 1 1 1 1 Recombination protein O N terminal G2F PF07474.12 ORF31509 - 0.044 13.6 1.5 0.065 13.0 1.0 1.5 1 1 0 1 1 1 0 G2F domain GalKase_gal_bdg PF10509.9 ORF28134 - 0.0063 16.0 0.0 0.011 15.2 0.0 1.4 1 0 0 1 1 1 1 Galactokinase galactose-binding signature WWE PF02825.20 ORF26705 - 2e-10 41.1 0.5 3.9e-10 40.2 0.5 1.5 1 0 0 1 1 1 1 WWE domain WGR PF05406.15 ORF26705 - 9.2e-07 28.8 0.2 1.8e-06 27.9 0.2 1.5 1 0 0 1 1 1 1 WGR domain Adeno_terminal PF02459.15 ORF26705 - 0.5 8.7 3.8 0.68 8.3 3.8 1.1 1 0 0 1 1 1 0 Adenoviral DNA terminal protein Syntaxin-6_N PF09177.11 ORF25455 - 5.8e-12 46.0 2.3 5.8e-12 46.0 2.3 2.6 1 1 1 2 2 2 1 Syntaxin 6, N-terminal PsiA PF06952.11 ORF25455 - 0.11 11.7 5.1 0.16 11.2 5.1 1.2 1 0 0 1 1 1 0 PsiA protein adh_short PF00106.25 ORF25455 - 0.28 10.6 4.4 0.23 10.9 0.5 2.1 1 1 0 2 2 2 0 short chain dehydrogenase XhlA PF10779.9 ORF25455 - 0.28 11.4 5.2 0.46 10.7 0.8 3.0 2 1 1 3 3 3 0 Haemolysin XhlA DUF3584 PF12128.8 ORF25455 - 0.69 7.4 26.7 0.89 7.0 26.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) NPV_P10 PF05531.12 ORF25455 - 3.6 8.1 7.7 3.4 8.2 0.8 2.7 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein FapA PF03961.13 ORF25455 - 4.6 5.7 11.3 5.3 5.5 3.5 2.2 1 1 1 2 2 2 0 Flagellar Assembly Protein A ZapB PF06005.12 ORF2524 - 0.32 11.5 7.5 2.9 8.4 0.1 3.1 3 0 0 3 3 3 0 Cell division protein ZapB Aldo_ket_red PF00248.21 ORF19822 - 3.6e-42 144.6 0.0 4.4e-42 144.3 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family EF-hand_1 PF00036.32 ORF16740 - 0.016 14.7 0.0 0.03 13.9 0.0 1.4 1 0 0 1 1 1 0 EF hand MDMPI_C PF07398.11 ORF16740 - 0.038 14.8 0.0 0.074 13.9 0.0 1.4 1 0 0 1 1 1 0 MDMPI C-terminal domain EF-hand_6 PF13405.6 ORF16740 - 0.068 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 ORF16740 - 0.12 12.8 0.1 0.18 12.3 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain pair MORN PF02493.20 ORF16489 - 3.5e-26 89.5 49.6 8.2e-08 31.7 1.4 7.6 8 0 0 8 8 8 5 MORN repeat DUF5549 PF17703.1 ORF15759 - 3.5 7.2 11.0 2.3 7.8 9.2 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5549) Chorion_2 PF03964.15 ORF152828 - 0.18 12.6 1.3 0.38 11.6 1.3 1.5 1 0 0 1 1 1 0 Chorion family 2 HATPase_c PF02518.26 ORF151786 - 1.5e-17 64.1 0.0 2.5e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF151786 - 1.7e-12 47.1 1.6 1.7e-12 47.1 1.6 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 ORF151786 - 0.023 14.6 0.3 0.51 10.3 0.3 2.2 1 1 0 1 1 1 0 GHKL domain DUF948 PF06103.11 ORF150792 - 2.1 8.7 8.1 0.75 10.1 1.8 2.9 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF1129 PF06570.11 ORF150792 - 3.2 7.2 4.4 0.46 9.9 0.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) ubiquitin PF00240.23 ORF14817 - 0.0054 16.4 0.0 0.011 15.5 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin family RAG1_imp_bd PF12560.8 ORF14817 - 0.028 14.0 6.8 0.038 13.5 6.8 1.2 1 0 0 1 1 1 0 RAG1 importin binding Metallophos_2 PF12850.7 ORF147489 - 0.15 12.2 0.1 0.21 11.8 0.1 1.1 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain MotCF PF09158.10 ORF147489 - 0.22 11.6 0.0 0.5 10.5 0.0 1.5 2 0 0 2 2 2 0 Bacteriophage T4 MotA, C-terminal Tra_M PF05261.11 ORF147429 - 0.0049 16.8 5.5 0.08 12.9 1.5 2.7 2 1 1 3 3 3 2 TraM protein, DNA-binding Ribosomal_S8 PF00410.19 ORF147429 - 0.2 11.6 1.7 1.7 8.6 0.4 2.2 2 0 0 2 2 2 0 Ribosomal protein S8 ATP_bind_1 PF03029.17 ORF147082 - 8.3e-48 163.3 0.0 1.1e-47 162.8 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 ORF147082 - 4.4e-05 23.1 0.0 9.2e-05 22.1 0.0 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF147082 - 0.00037 20.1 0.0 0.00063 19.3 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B DUF3450 PF11932.8 ORF147082 - 0.014 14.7 0.1 0.086 12.1 0.0 2.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) MAAL_C PF07476.11 ORF147082 - 0.018 14.2 0.0 0.026 13.7 0.0 1.1 1 0 0 1 1 1 0 Methylaspartate ammonia-lyase C-terminus Bromo_TP PF07524.13 ORF147082 - 0.029 14.4 0.4 0.24 11.4 0.0 2.4 2 1 1 3 3 3 0 Bromodomain associated MMR_HSR1 PF01926.23 ORF147082 - 0.06 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase FlaC_arch PF05377.11 ORF147082 - 0.074 13.5 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) RsgA_GTPase PF03193.16 ORF147082 - 0.15 12.0 0.0 0.7 9.8 0.0 2.0 2 0 0 2 2 2 0 RsgA GTPase Nsp1_C PF05064.13 ORF147082 - 0.33 10.8 0.9 1 9.2 0.3 2.1 3 0 0 3 3 3 0 Nsp1-like C-terminal region EF-hand_1 PF00036.32 ORF146498 - 0.016 14.7 0.0 0.03 13.9 0.0 1.4 1 0 0 1 1 1 0 EF hand MDMPI_C PF07398.11 ORF146498 - 0.038 14.8 0.0 0.074 13.9 0.0 1.4 1 0 0 1 1 1 0 MDMPI C-terminal domain EF-hand_6 PF13405.6 ORF146498 - 0.068 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain EF-hand_7 PF13499.6 ORF146498 - 0.12 12.8 0.1 0.18 12.3 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain pair PH PF00169.29 ORF141888 - 0.00015 22.3 0.6 0.00051 20.5 0.5 2.0 1 1 0 1 1 1 1 PH domain UMP1 PF05348.11 ORF141888 - 0.0044 17.2 0.4 0.01 16.0 0.4 1.6 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 PDZ_6 PF17820.1 ORF137593 - 0.037 13.9 0.1 0.62 10.0 0.0 2.3 2 0 0 2 2 2 0 PDZ domain DnaJ_C PF01556.18 ORF1366 - 5.7e-40 136.8 0.0 7.1e-40 136.5 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DUF2475 PF10629.9 ORF132514 - 9.3e-08 32.2 3.4 0.00019 21.6 0.6 3.4 2 1 1 3 3 3 2 Protein of unknown function (DUF2475) MORN PF02493.20 ORF129143 - 1.2e-25 87.8 49.7 3.5e-08 32.9 0.4 7.9 9 0 0 9 9 9 6 MORN repeat PSII_Pbs31 PF18240.1 ORF126899 - 0.24 11.8 0.2 0.24 11.8 0.2 2.9 2 2 1 3 3 3 0 Photosystem II Psb31 protein Pro_isomerase PF00160.21 ORF125547 - 3.7e-31 108.5 0.0 5.4e-31 108.0 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Lipase_GDSL_2 PF13472.6 ORF125023 - 3.7e-06 27.4 0.0 5.6e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Trypan_PARP PF05887.11 ORF12446 - 0.12 12.4 1.0 0.22 11.5 1.0 1.3 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) RNA_pol_Rpb1_5 PF04998.17 ORF124416 - 2.7e-26 92.6 1.0 3.1e-26 92.4 1.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 ATP-synt_B PF00430.18 ORF12428 - 2.3e-08 34.2 18.9 1.8e-07 31.3 18.9 2.0 1 1 0 1 1 1 1 ATP synthase B/B' CF(0) EI24 PF07264.11 ORF12428 - 0.0043 17.3 0.1 0.0061 16.8 0.1 1.2 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) V-ATPase_G PF03179.15 ORF12428 - 0.011 16.3 14.1 0.016 15.7 14.1 1.2 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit DUF3054 PF11255.8 ORF12428 - 0.055 14.0 3.4 0.096 13.2 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3054) OppC_N PF12911.7 ORF123618 - 2.7 8.1 5.4 1.3 9.1 1.0 2.5 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C RBFA PF02033.18 ORF121958 - 2.5e-09 37.5 0.1 3.7e-09 37.0 0.1 1.2 1 0 0 1 1 1 1 Ribosome-binding factor A Pkinase PF00069.25 ORF119253 - 2.4e-09 37.0 0.4 4.9e-09 35.9 0.1 1.6 2 0 0 2 2 2 1 Protein kinase domain PBD PF00786.28 ORF119253 - 1.4e-06 28.6 0.4 0.00041 20.7 0.1 2.7 2 0 0 2 2 2 2 P21-Rho-binding domain Pkinase_Tyr PF07714.17 ORF119253 - 0.002 17.4 0.2 0.0048 16.2 0.1 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase 2OG-FeII_Oxy PF03171.20 ORF119223 - 0.0011 19.4 0.0 0.0021 18.5 0.0 1.5 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily YfhE PF14152.6 ORF119223 - 0.79 9.8 0.0 0.79 9.8 0.0 2.3 2 0 0 2 2 2 0 YfhE-like protein Sulfotransfer_2 PF03567.14 ORF116394 - 0.0022 18.0 0.0 1.2 9.0 0.0 2.1 2 0 0 2 2 2 2 Sulfotransferase family Helicase_C_2 PF13307.6 ORF113218 - 1.7e-35 122.7 0.0 2.1e-35 122.4 0.0 1.1 1 0 0 1 1 1 1 Helicase C-terminal domain Helicase_C PF00271.31 ORF113218 - 0.05 14.0 0.0 0.095 13.1 0.0 1.5 1 1 0 1 1 1 0 Helicase conserved C-terminal domain zf-H2C2_2 PF13465.6 ORF11278 - 1.1e-05 25.6 4.5 1.9e-05 24.9 1.0 2.6 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF11278 - 0.0016 18.7 0.9 0.0016 18.7 0.9 4.1 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF11278 - 8.1 7.6 16.8 0.42 11.6 0.9 4.2 4 0 0 4 4 4 0 C2H2-type zinc finger Mito_carr PF00153.27 ORF110727 - 1.4e-16 60.2 0.1 2.5e-11 43.3 0.0 2.4 2 0 0 2 2 2 2 Mitochondrial carrier protein ETRAMP PF09716.10 NODE_28754_length_752_cov_2.832636_g22657_i0reverse_frame_1 - 0.6 10.2 3.0 0.57 10.3 1.2 1.8 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) FKBP_C PF00254.28 NODE_28751_length_752_cov_3.948396_g22654_i0forward_frame_1 - 0.01 16.2 1.0 0.027 14.8 0.8 1.9 2 1 0 2 2 2 0 FKBP-type peptidyl-prolyl cis-trans isomerase Mitofilin PF09731.9 NODE_28751_length_752_cov_3.948396_g22654_i0forward_frame_1 - 0.05 12.4 8.1 0.063 12.1 8.1 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein ROK PF00480.20 NODE_28730_length_752_cov_244.440725_g22635_i0forward_frame_1 - 2.3e-20 73.3 0.0 3.1e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 ROK family baeRF_family10 PF18854.1 NODE_28730_length_752_cov_244.440725_g22635_i0forward_frame_1 - 0.0085 16.3 0.0 0.013 15.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 baeRF_family2 PF18844.1 NODE_28730_length_752_cov_244.440725_g22635_i0forward_frame_1 - 0.017 15.2 0.3 0.027 14.5 0.3 1.3 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 Glucokinase PF02685.16 NODE_28730_length_752_cov_244.440725_g22635_i0forward_frame_1 - 0.069 12.1 1.5 0.64 9.0 1.3 2.0 1 1 1 2 2 2 0 Glucokinase PRONE PF03759.13 NODE_28634_length_754_cov_1414.461752_g21318_i1forward_frame_3 - 0.0024 16.8 2.9 0.0031 16.4 2.9 1.3 1 0 0 1 1 1 1 PRONE (Plant-specific Rop nucleotide exchanger) HXXSHH PF07586.11 NODE_28634_length_754_cov_1414.461752_g21318_i1forward_frame_3 - 0.023 14.3 1.0 0.035 13.7 1.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1552) FAM150 PF15129.6 NODE_28634_length_754_cov_1414.461752_g21318_i1forward_frame_3 - 2.4 8.3 10.0 0.2 11.8 4.1 2.1 2 0 0 2 2 2 0 FAM150 family SRCR_2 PF15494.6 NODE_28561_length_756_cov_151.948682_g22489_i0reverse_frame_3 - 1.7 9.3 4.8 3.2 8.4 1.8 2.6 2 1 0 2 2 2 0 Scavenger receptor cysteine-rich domain MARCKS PF02063.17 NODE_28561_length_756_cov_151.948682_g22489_i0reverse_frame_2 - 0.77 9.7 10.2 1.2 9.1 10.2 1.2 1 0 0 1 1 1 0 MARCKS family Glyco_hydro_7 PF00840.20 ORF95398 - 1.8e-05 23.7 21.9 0.0034 16.1 0.8 3.4 1 1 2 3 3 3 3 Glycosyl hydrolase family 7 DEFB136 PF17333.2 ORF94921 - 0.031 14.2 0.2 0.031 14.2 0.2 2.2 3 0 0 3 3 3 0 Beta defensin 136 APH PF01636.23 ORF94464 - 1.7e-12 47.8 0.1 1.7e-12 47.8 0.1 1.5 2 0 0 2 2 2 1 Phosphotransferase enzyme family Tetraspanin PF00335.20 ORF92370 - 0.00049 19.9 3.1 0.00049 19.9 3.1 1.5 2 0 0 2 2 2 1 Tetraspanin family PHO4 PF01384.20 ORF92370 - 0.045 12.8 0.1 0.044 12.8 0.1 1.1 1 0 0 1 1 1 0 Phosphate transporter family DUF1129 PF06570.11 ORF92370 - 3.8 6.9 7.4 5.6 6.4 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Tetraspanin PF00335.20 ORF88433 - 0.00049 19.9 3.1 0.00049 19.9 3.1 1.5 2 0 0 2 2 2 1 Tetraspanin family PHO4 PF01384.20 ORF88433 - 0.045 12.8 0.1 0.044 12.8 0.1 1.1 1 0 0 1 1 1 0 Phosphate transporter family DUF1129 PF06570.11 ORF88433 - 3.8 6.9 7.4 5.6 6.4 7.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Sugar_tr PF00083.24 ORF87946 - 7.3e-24 84.4 11.3 8.6e-24 84.2 11.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF87946 - 5.2e-06 25.6 6.8 5.2e-06 25.6 6.8 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily 7TMR-DISM_7TM PF07695.11 ORF87946 - 0.18 11.7 20.2 0.044 13.7 10.3 2.2 1 1 0 2 2 2 0 7TM diverse intracellular signalling DUF5090 PF17009.5 ORF87946 - 2.5 8.0 17.6 5.4 6.9 0.8 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5090) Pkinase PF00069.25 ORF86682 - 5.1e-40 137.5 0.0 8e-40 136.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF86682 - 3.9e-25 88.6 0.0 5.2e-25 88.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF86682 - 0.00023 20.0 0.2 0.00034 19.5 0.2 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF86682 - 0.0034 16.8 0.0 0.0045 16.3 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF86682 - 0.0082 15.5 0.0 0.015 14.6 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FlgN PF05130.12 ORF86682 - 0.021 15.3 0.1 0.041 14.4 0.1 1.4 1 0 0 1 1 1 0 FlgN protein FTA2 PF13095.6 ORF86682 - 0.028 14.1 0.1 0.16 11.6 0.0 2.0 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 EF-hand_6 PF13405.6 ORF8576 - 8.9e-07 28.4 0.3 0.063 13.2 0.0 2.7 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 ORF8576 - 0.00025 21.5 0.1 0.00065 20.1 0.1 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF8576 - 0.00097 18.5 0.2 0.13 11.8 0.1 2.6 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 ORF8576 - 0.025 14.1 3.2 1.9 8.1 0.4 3.1 3 0 0 3 3 3 0 EF hand Wtap PF17098.5 ORF8576 - 0.025 14.5 0.4 0.056 13.4 0.1 1.6 2 0 0 2 2 2 0 WTAP/Mum2p family EF-hand_8 PF13833.6 ORF8576 - 0.06 13.2 0.1 8 6.4 0.1 2.4 2 0 0 2 2 2 0 EF-hand domain pair Methyltransf_21 PF05050.12 ORF84664 - 6.6e-05 23.0 0.1 0.00014 22.0 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase FkbM domain Methyltransf_22 PF13383.6 ORF84664 - 0.093 12.3 0.3 2.2 7.8 0.4 2.0 2 0 0 2 2 2 0 Methyltransferase domain Pkinase PF00069.25 ORF83728 - 2.3e-10 40.3 0.5 3.4e-10 39.7 0.0 1.5 2 0 0 2 2 2 1 Protein kinase domain DUF1664 PF07889.12 ORF83728 - 0.0016 18.5 3.8 0.0029 17.7 3.8 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) Pkinase_Tyr PF07714.17 ORF83728 - 0.0018 17.6 0.0 0.0032 16.8 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase KDZ PF18758.1 ORF83728 - 0.03 13.9 0.4 0.05 13.2 0.4 1.3 1 0 0 1 1 1 0 Kyakuja-Dileera-Zisupton transposase Lys-AminoMut_A PF09043.11 ORF83728 - 0.06 11.8 0.5 0.081 11.4 0.5 1.1 1 0 0 1 1 1 0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Atg14 PF10186.9 ORF83728 - 0.062 12.4 2.8 0.082 12.0 2.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 EPOP PF15223.6 ORF83728 - 0.082 12.3 0.8 0.11 11.9 0.8 1.1 1 0 0 1 1 1 0 Elongin BC and Polycomb repressive complex 2-associated protein Rab5-bind PF09311.11 ORF83728 - 0.084 12.3 8.7 0.13 11.7 8.7 1.1 1 0 0 1 1 1 0 Rabaptin-like protein ALMT PF11744.8 ORF83728 - 0.21 10.4 0.3 0.25 10.1 0.3 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter GrpE PF01025.19 ORF83728 - 0.25 11.0 5.0 0.35 10.5 5.0 1.2 1 0 0 1 1 1 0 GrpE DUF3450 PF11932.8 ORF83728 - 0.26 10.6 5.9 0.37 10.1 5.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) DUF848 PF05852.11 ORF83728 - 0.72 10.0 6.0 1.1 9.3 6.0 1.3 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Macoilin PF09726.9 ORF83728 - 1.5 7.3 8.5 1.9 6.9 8.5 1.1 1 0 0 1 1 1 0 Macoilin family TMPIT PF07851.13 ORF83728 - 2.8 7.1 4.2 3.9 6.6 4.2 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF1977 PF09320.11 ORF83728 - 4.2 7.7 5.9 54 4.1 5.9 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF1977) Proteasome PF00227.26 ORF81392 - 1.3e-41 142.2 0.1 1.6e-41 141.9 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Glyco_hydro_38N PF01074.22 ORF81392 - 0.21 10.9 0.0 0.34 10.2 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 N-terminal domain MitMem_reg PF13012.6 ORF80415 - 2.3e-30 105.3 0.1 3.6e-30 104.7 0.1 1.3 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 ORF80415 - 1.9e-08 34.3 3.1 5.6e-08 32.8 0.0 2.5 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease AAA_23 PF13476.6 ORF80415 - 0.005 17.4 7.2 0.0061 17.1 7.2 1.2 1 0 0 1 1 1 1 AAA domain Phyto_Pns9_10 PF05878.11 ORF80415 - 0.0056 15.9 0.9 0.52 9.4 0.2 2.1 1 1 1 2 2 2 2 Phytoreovirus nonstructural protein Pns9/Pns10 DUF1682 PF07946.14 ORF80415 - 0.015 14.5 5.7 0.021 14.1 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) FYDLN_acid PF09538.10 ORF80415 - 0.019 15.6 6.0 5.7 7.7 6.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) MscS_TM PF12794.7 ORF80415 - 0.1 11.4 0.4 0.14 10.9 0.4 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Toxin_15 PF07906.13 ORF76718 - 0.0016 18.1 2.7 0.0031 17.2 0.2 2.0 2 0 0 2 2 2 1 ShET2 enterotoxin, N-terminal region CHS5_N PF16892.5 ORF76036 - 0.22 11.5 0.1 0.41 10.6 0.1 1.4 1 0 0 1 1 1 0 Chitin biosynthesis protein CHS5 N-terminus Homeodomain PF00046.29 ORF73744 - 1.2e-07 31.4 4.8 2.2e-07 30.6 4.8 1.4 1 0 0 1 1 1 1 Homeodomain Rad50_zn_hook PF04423.14 ORF73744 - 0.073 12.9 0.3 0.073 12.9 0.3 2.6 2 0 0 2 2 2 0 Rad50 zinc hook motif DAO PF01266.24 ORF71543 - 5.9e-20 72.1 0.0 7.8e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 ORF71543 - 5.2e-06 25.9 0.0 0.079 12.2 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 ORF71543 - 0.00019 20.8 0.0 0.00032 20.0 0.0 1.4 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 ORF71543 - 0.0013 17.9 0.4 0.013 14.6 0.2 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 ORF71543 - 0.0028 16.8 0.0 0.0047 16.1 0.0 1.4 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 ORF71543 - 0.0034 17.6 0.0 0.0067 16.6 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 ORF71543 - 0.006 16.0 0.0 0.0096 15.3 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 ORF71543 - 0.03 13.0 0.1 0.59 8.8 0.1 2.1 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox_3 PF13738.6 ORF71543 - 0.039 13.2 0.2 4.6 6.4 0.0 2.5 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 ORF71543 - 0.047 13.3 0.0 0.1 12.1 0.0 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.21 ORF71543 - 0.068 12.5 0.0 0.16 11.3 0.0 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain GDI PF00996.18 ORF71543 - 0.074 11.6 0.2 0.14 10.6 0.0 1.6 2 0 0 2 2 2 0 GDP dissociation inhibitor Pyr_redox PF00070.27 ORF71543 - 0.089 13.4 0.3 0.46 11.1 0.2 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 ORF71543 - 0.1 12.5 0.0 0.2 11.6 0.0 1.6 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 ORF71543 - 0.12 11.4 0.0 0.66 9.0 0.0 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein NADPH_Ox PF08414.10 ORF71543 - 0.17 12.3 0.0 1.9 8.9 0.0 2.1 2 0 0 2 2 2 0 Respiratory burst NADPH oxidase PA14 PF07691.12 ORF71319 - 2.2e-11 43.7 0.0 3.5e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 PA14 domain Ank_2 PF12796.7 ORF64447 - 2.8e-47 159.2 5.2 8.1e-17 61.6 0.5 4.0 1 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF64447 - 1.4e-37 127.6 2.3 1.1e-10 41.8 0.1 4.6 3 1 2 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF64447 - 9.4e-37 124.6 21.0 7.3e-10 38.9 0.2 6.6 1 1 6 7 7 7 7 Ankyrin repeats (many copies) Ank PF00023.30 ORF64447 - 1.1e-30 104.7 5.5 0.0007 19.9 0.0 7.1 6 1 1 7 7 7 7 Ankyrin repeat Ank_3 PF13606.6 ORF64447 - 3.4e-24 82.3 1.5 0.0029 18.0 0.0 7.2 7 0 0 7 7 7 7 Ankyrin repeat Prominin PF05478.11 ORF64345 - 0.066 11.2 0.3 4.7 5.0 0.0 2.1 2 0 0 2 2 2 0 Prominin DUF5113 PF17140.4 ORF64345 - 0.2 11.4 0.7 1.8 8.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5113) Rep_3 PF01051.21 ORF61282 - 4.3e-48 164.0 0.0 4.9e-48 163.9 0.0 1.0 1 0 0 1 1 1 1 Initiator Replication protein Lip_A_acyltrans PF03279.13 ORF61282 - 0.02 14.0 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial lipid A biosynthesis acyltransferase PIN_11 PF18479.1 ORF56776 - 0.057 13.6 0.0 0.099 12.8 0.0 1.4 1 0 0 1 1 1 0 PIN like domain DUF1298 PF06974.13 ORF55525 - 1.7e-16 60.4 0.1 3.2e-16 59.6 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1298) 14-3-3 PF00244.20 ORF51026 - 4.7e-96 320.6 6.9 5.4e-96 320.4 6.9 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF51026 - 0.018 15.1 0.2 0.049 13.6 0.2 1.8 1 0 0 1 1 1 0 Flagellar protein FlaF DoxD PF04173.13 ORF50453 - 0.011 15.6 2.5 0.018 14.9 2.5 1.3 1 0 0 1 1 1 0 TQO small subunit DoxD FtsX PF02687.21 ORF4728 - 0.032 14.7 6.4 0.032 14.7 6.4 2.4 1 1 1 2 2 2 0 FtsX-like permease family zf_C2H2_10 PF18414.1 ORF4728 - 0.078 12.5 0.2 0.23 11.0 0.2 1.8 1 0 0 1 1 1 0 C2H2 type zinc-finger Ninjurin PF04923.12 ORF4728 - 2.5 8.1 9.1 0.12 12.3 2.7 2.0 1 1 1 2 2 2 0 Ninjurin DUF4834 PF16118.5 ORF4728 - 6.1 7.9 14.1 11 7.1 1.9 3.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4834) Shisa PF13908.6 ORF4728 - 9.8 6.4 5.6 1.8 8.8 0.0 2.3 2 1 1 3 3 3 0 Wnt and FGF inhibitory regulator DBR1 PF05011.13 ORF45359 - 0.016 15.7 0.1 0.02 15.3 0.1 1.3 1 0 0 1 1 1 0 Lariat debranching enzyme, C-terminal domain ELO PF01151.18 ORF44114 - 1.1e-47 162.6 11.0 1.2e-47 162.6 11.0 1.0 1 0 0 1 1 1 1 GNS1/SUR4 family DHFR_2 PF06442.11 ORF43790 - 0.092 12.6 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 R67 dihydrofolate reductase PapD_N PF00345.20 ORF43503 - 7.5e-05 22.6 0.0 0.00014 21.7 0.0 1.5 1 1 0 1 1 1 1 Pili and flagellar-assembly chaperone, PapD N-terminal domain DUF2157 PF09925.9 ORF37770 - 0.019 14.7 13.9 0.049 13.4 7.7 2.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) Ac76 PF05814.11 ORF37770 - 0.026 14.5 1.1 0.026 14.5 1.1 4.7 2 2 2 5 5 5 0 Orf76 (Ac76) 5TM-5TMR_LYT PF07694.12 ORF37770 - 0.57 9.7 15.8 0.18 11.3 7.2 2.4 2 1 0 2 2 2 0 5TMR of 5TMR-LYT Ac76 PF05814.11 ORF37753 - 0.032 14.2 1.3 0.032 14.2 1.3 5.0 2 2 3 5 5 5 0 Orf76 (Ac76) DUF2157 PF09925.9 ORF37753 - 0.54 10.0 12.0 0.29 10.9 5.4 2.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) 5TM-5TMR_LYT PF07694.12 ORF37753 - 2.9 7.4 15.7 0.18 11.3 7.2 2.4 2 1 0 2 2 2 0 5TMR of 5TMR-LYT MraZ PF02381.18 ORF35934 - 0.12 12.3 0.0 9 6.4 0.0 2.3 2 0 0 2 2 2 0 MraZ protein, putative antitoxin-like UPF0016 PF01169.19 ORF35580 - 3.7e-19 68.8 15.2 6.8e-10 39.1 7.0 2.5 3 0 0 3 3 3 2 Uncharacterized protein family UPF0016 Peptidase_U4 PF03419.13 ORF35580 - 0.0037 16.6 2.2 0.0068 15.7 2.2 1.4 1 0 0 1 1 1 1 Sporulation factor SpoIIGA SPACA7 PF15307.6 ORF35580 - 0.047 14.0 1.9 0.14 12.4 1.9 1.8 2 0 0 2 2 2 0 Sperm acrosome-associated protein 7 MRAP PF15183.6 ORF35580 - 0.055 13.4 0.1 0.055 13.4 0.1 2.2 3 0 0 3 3 3 0 Melanocortin-2 receptor accessory protein family Flu_B_M2 PF04772.12 ORF35580 - 0.23 11.7 1.3 12 6.2 0.0 2.4 1 1 1 2 2 2 0 Influenza B matrix protein 2 (BM2) MgtC PF02308.16 ORF35580 - 0.25 11.7 8.6 0.14 12.5 1.6 2.3 2 0 0 2 2 2 0 MgtC family NAD_binding_1 PF00175.21 ORF34557 - 1e-23 84.1 0.0 2.2e-23 83.0 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF34557 - 5.2e-14 52.4 0.0 8.5e-14 51.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF34557 - 3.9e-06 27.1 0.0 3.4e-05 24.0 0.0 2.0 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF34557 - 0.12 12.8 0.2 0.2 12.1 0.2 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC HEAT_EZ PF13513.6 ORF32828 - 0.045 14.3 0.1 0.11 13.0 0.1 1.7 1 0 0 1 1 1 0 HEAT-like repeat RST PF12174.8 ORF32164 - 0.0024 17.8 0.1 3.5 7.6 0.0 2.5 2 0 0 2 2 2 2 RCD1-SRO-TAF4 (RST) plant domain DUF5580 PF17743.1 ORF32164 - 0.0099 14.5 0.1 0.048 12.2 0.0 1.7 1 1 1 2 2 2 2 Family of unknown function (DUF5580) Rieske PF00355.26 ORF30781 - 1.8e-12 47.0 0.0 4.3e-12 45.8 0.0 1.6 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF30781 - 2.5e-07 30.6 0.0 6.2e-07 29.3 0.0 1.7 2 0 0 2 2 2 1 Rieske-like [2Fe-2S] domain zf-A20 PF01754.16 ORF30781 - 0.33 10.9 2.7 0.35 10.9 0.1 2.1 2 0 0 2 2 2 0 A20-like zinc finger NAD_binding_1 PF00175.21 ORF30504 - 1e-23 84.1 0.0 2.2e-23 83.0 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF30504 - 5.2e-14 52.4 0.0 8.5e-14 51.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF30504 - 3.9e-06 27.1 0.0 3.4e-05 24.0 0.0 2.0 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF30504 - 0.12 12.8 0.2 0.2 12.1 0.2 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC zf-B_box PF00643.24 ORF29230 - 2.9e-09 36.9 2.9 6.7e-09 35.8 2.9 1.6 1 0 0 1 1 1 1 B-box zinc finger Latarcin PF10279.9 ORF29230 - 0.29 11.6 6.1 1.8 9.0 0.6 3.2 3 0 0 3 3 3 0 Latarcin precursor DUF4284 PF14112.6 ORF29230 - 0.67 10.9 6.6 0.71 10.8 4.0 2.3 1 1 1 2 2 2 0 Immunity protein 22 KELK PF15796.5 ORF29230 - 0.72 10.3 8.1 0.65 10.5 2.8 2.4 2 0 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase ubiquitin PF00240.23 ORF28592 - 1.1e-24 86.0 8.8 3.4e-08 33.1 0.0 4.6 4 1 0 4 4 4 4 Ubiquitin family Rad60-SLD PF11976.8 ORF28592 - 2.1e-10 40.3 7.0 0.00079 19.2 0.0 3.8 3 2 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF28592 - 1e-06 29.1 4.8 0.0015 18.9 0.1 3.7 3 1 0 3 3 3 2 Ubiquitin-like domain UN_NPL4 PF11543.8 ORF28592 - 0.00018 21.9 1.3 1.5 9.4 0.2 3.2 3 0 0 3 3 3 2 Nuclear pore localisation protein NPL4 Ubiquitin_4 PF18036.1 ORF28592 - 0.097 12.7 4.3 23 5.1 0.0 4.8 5 1 1 6 6 6 0 Ubiquitin-like domain PDZ_6 PF17820.1 ORF28592 - 0.16 11.9 0.0 3.7 7.5 0.0 2.5 2 0 0 2 2 2 0 PDZ domain Rubis-subs-bind PF09273.11 ORF28531 - 1.7e-06 28.8 3.1 4.6e-06 27.3 0.4 2.4 1 1 2 3 3 3 1 Rubisco LSMT substrate-binding SET PF00856.28 ORF28531 - 4.8e-05 23.8 0.0 9.5e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 SET domain Peptidase_S9 PF00326.21 ORF27718 - 9e-05 22.0 0.0 0.0048 16.4 0.0 2.1 1 1 1 2 2 2 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF27718 - 0.00029 20.2 0.0 0.41 9.9 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 ORF27718 - 0.00033 20.3 0.0 0.00047 19.8 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.13 ORF27718 - 0.0034 17.3 0.0 0.0046 16.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_1 PF00561.20 ORF27718 - 0.0051 16.5 0.0 0.12 12.0 0.0 2.0 1 1 1 2 2 2 1 alpha/beta hydrolase fold FSH1 PF03959.13 ORF27718 - 0.18 11.5 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 Serine hydrolase (FSH1) PAF-AH_p_II PF03403.13 ORF27718 - 0.22 10.0 0.0 0.29 9.6 0.0 1.1 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II Peptidase_S15 PF02129.18 ORF27718 - 0.24 11.0 0.0 0.34 10.4 0.0 1.2 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Exo_endo_phos PF03372.23 ORF26557 - 0.044 13.3 0.0 0.073 12.6 0.0 1.6 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family 14-3-3 PF00244.20 ORF23600 - 4.7e-96 320.6 6.9 5.4e-96 320.4 6.9 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF23600 - 0.018 15.1 0.2 0.049 13.6 0.2 1.8 1 0 0 1 1 1 0 Flagellar protein FlaF 14-3-3 PF00244.20 ORF22259 - 4.7e-96 320.6 6.9 5.4e-96 320.4 6.9 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF22259 - 0.02 14.9 0.1 0.058 13.4 0.1 1.8 1 0 0 1 1 1 0 Flagellar protein FlaF Got1 PF04178.12 ORF18254 - 2.8e-09 37.4 19.3 4e-09 36.9 19.3 1.2 1 0 0 1 1 1 1 Got1/Sft2-like family TMEM51 PF15345.6 ORF18254 - 0.019 14.8 0.0 0.038 13.8 0.0 1.4 1 0 0 1 1 1 0 Transmembrane protein 51 MscS_TM PF12794.7 ORF18254 - 2.6 6.8 10.5 3.9 6.3 10.5 1.3 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 DUF2207 PF09972.9 ORF18254 - 4.2 6.0 10.4 19 3.8 10.4 1.8 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) TMEM208_SND2 PF05620.11 ORF18254 - 7.8 6.2 8.9 1 9.1 0.9 2.6 1 1 2 3 3 3 0 SRP-independent targeting protein 2/TMEM208 Sulfatase PF00884.23 ORF17919 - 0.028 13.8 0.0 0.044 13.2 0.0 1.3 1 0 0 1 1 1 0 Sulfatase Sulfatase_C PF14707.6 ORF17919 - 0.047 14.4 0.0 0.073 13.8 0.0 1.3 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase ThiF PF00899.21 ORF16233 - 4.8e-66 222.6 0.0 6e-66 222.3 0.0 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 ORF16233 - 0.00013 22.2 0.1 0.00037 20.8 0.1 1.7 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 ORF16233 - 0.00022 21.6 0.0 0.00038 20.9 0.0 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 ORF16233 - 0.04 14.0 0.1 0.47 10.5 0.0 2.1 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 ORF16233 - 0.073 12.4 0.1 0.89 8.9 0.0 2.1 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 ORF16233 - 0.088 12.4 0.1 0.2 11.2 0.1 1.7 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 ORF16233 - 0.1 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 ORF16233 - 0.11 11.7 0.3 0.16 11.2 0.3 1.2 1 0 0 1 1 1 0 FAD binding domain Homeodomain PF00046.29 ORF149744 - 1.2e-07 31.4 4.8 2.2e-07 30.6 4.8 1.4 1 0 0 1 1 1 1 Homeodomain Rad50_zn_hook PF04423.14 ORF149744 - 0.073 12.9 0.3 0.073 12.9 0.3 2.6 2 0 0 2 2 2 0 Rad50 zinc hook motif CLIP_SPH_Scar PF18399.1 ORF149566 - 0.065 13.3 0.4 0.49 10.5 0.0 2.3 2 1 1 3 3 3 0 Clip-domain serine protease homolog Scarface DUF3159 PF11361.8 ORF149514 - 0.11 12.2 0.3 0.11 12.2 0.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3159) LysR_substrate PF03466.20 ORF147441 - 0.15 11.4 0.4 0.87 8.9 0.1 2.0 2 0 0 2 2 2 0 LysR substrate binding domain MitMem_reg PF13012.6 ORF145002 - 2.3e-30 105.3 0.1 3.6e-30 104.7 0.1 1.3 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 ORF145002 - 1.9e-08 34.3 3.1 5.6e-08 32.8 0.0 2.5 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease AAA_23 PF13476.6 ORF145002 - 0.005 17.4 7.2 0.0061 17.1 7.2 1.2 1 0 0 1 1 1 1 AAA domain Phyto_Pns9_10 PF05878.11 ORF145002 - 0.0056 15.9 0.9 0.52 9.4 0.2 2.1 1 1 1 2 2 2 2 Phytoreovirus nonstructural protein Pns9/Pns10 DUF1682 PF07946.14 ORF145002 - 0.015 14.5 5.7 0.021 14.1 5.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) FYDLN_acid PF09538.10 ORF145002 - 0.019 15.6 6.0 5.7 7.7 6.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) MscS_TM PF12794.7 ORF145002 - 0.1 11.4 0.4 0.14 10.9 0.4 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 NAD_binding_1 PF00175.21 ORF144914 - 1e-23 84.1 0.0 2.2e-23 83.0 0.0 1.6 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 ORF144914 - 5.2e-14 52.4 0.0 8.5e-14 51.7 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 ORF144914 - 3.9e-06 27.1 0.0 3.4e-05 24.0 0.0 2.0 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Phage_TAC_6 PF09550.10 ORF144914 - 0.12 12.8 0.2 0.2 12.1 0.2 1.3 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC Beta-lactamase PF00144.24 ORF135754 - 1.4e-15 57.4 0.5 1.7e-15 57.1 0.5 1.2 1 0 0 1 1 1 1 Beta-lactamase A_deaminase PF00962.22 ORF13426 - 5e-39 134.5 0.0 6.5e-39 134.2 0.0 1.0 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.11 ORF13426 - 0.036 13.5 0.2 0.096 12.1 0.2 1.6 2 0 0 2 2 2 0 Amidohydrolase family TMEM174 PF15029.6 ORF130284 - 0.0038 17.0 0.6 0.0058 16.4 0.6 1.2 1 0 0 1 1 1 1 Transmembrane protein 174 Colicin_im PF03857.13 ORF130284 - 1.6 8.6 8.8 0.15 12.1 3.1 2.0 2 0 0 2 2 2 0 Colicin immunity protein ubiquitin PF00240.23 ORF128770 - 2.3e-25 88.1 8.6 7e-08 32.1 0.0 4.7 3 2 0 3 3 3 3 Ubiquitin family Rad60-SLD PF11976.8 ORF128770 - 8.6e-12 44.7 7.1 0.0002 21.1 0.2 3.3 3 0 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF128770 - 8.9e-09 35.7 6.3 0.00014 22.2 0.1 3.6 2 2 1 3 3 3 2 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF128770 - 3.1e-05 23.9 5.3 0.64 10.1 0.1 4.6 3 2 0 4 4 4 2 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF128770 - 0.0015 18.6 0.1 3.4 7.8 0.0 3.0 3 0 0 3 3 3 2 Ubiquitin-2 like Rad60 SUMO-like TUG-UBL1 PF11470.8 ORF128770 - 0.004 17.3 0.2 1.6 9.0 0.0 2.9 3 0 0 3 3 3 1 TUG ubiquitin-like domain UN_NPL4 PF11543.8 ORF128770 - 0.084 13.4 1.3 1.2 9.7 0.0 2.7 3 1 0 3 3 3 0 Nuclear pore localisation protein NPL4 MMPL PF03176.15 ORF126520 - 4.3e-30 104.8 11.9 1.7e-26 93.0 0.7 2.0 2 0 0 2 2 2 2 MMPL family DUF3899 PF13038.6 ORF126520 - 0.26 11.8 2.9 6.6 7.3 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) GH3 PF03321.13 ORF124024 - 0.0037 16.2 0.0 0.0044 16.0 0.0 1.0 1 0 0 1 1 1 1 GH3 auxin-responsive promoter ubiquitin PF00240.23 ORF120410 - 6.8e-09 35.4 3.3 3.6e-07 29.8 0.6 2.7 3 0 0 3 3 3 2 Ubiquitin family Rad60-SLD PF11976.8 ORF120410 - 4.2e-08 32.9 3.0 1.9e-05 24.4 0.5 3.0 3 0 0 3 3 3 2 Ubiquitin-2 like Rad60 SUMO-like PI3K_rbd PF00794.18 ORF120410 - 0.017 15.3 0.0 0.86 9.8 0.0 2.3 2 0 0 2 2 2 0 PI3-kinase family, ras-binding domain DUF104 PF01954.16 ORF120410 - 0.071 13.6 0.6 0.23 11.9 0.6 1.8 1 0 0 1 1 1 0 Protein of unknown function DUF104 FERM_f0 PF16511.5 ORF120410 - 0.14 12.5 0.0 0.26 11.6 0.0 1.5 1 0 0 1 1 1 0 N-terminal or F0 domain of Talin-head FERM zf-RanBP PF00641.18 ORF113630 - 2e-10 39.8 4.8 5.1e-10 38.5 4.8 1.7 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others OB_NTP_bind PF07717.16 ORF113630 - 0.0042 17.4 0.0 0.0098 16.2 0.0 1.6 1 1 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold UvrD-helicase PF00580.21 ORF112179 - 0.083 12.4 3.6 0.09 12.3 2.9 1.3 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain DUF4549 PF15082.6 ORF106326 - 0.014 15.2 0.3 0.03 14.1 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4549) Pox_polyA_pol_N PF12630.7 ORF106326 - 2.5 8.5 5.0 3.4 8.1 0.8 2.5 1 1 2 3 3 3 0 Poxvirus poly(A) polymerase N-terminal domain LRS4 PF10422.9 ORF102194 - 0.17 11.4 0.1 0.27 10.7 0.1 1.2 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 Deltaretro_Tax PF05599.11 NODE_28941_length_748_cov_2.566620_g22825_i0reverse_frame_1 - 0.12 12.9 0.5 0.29 11.7 0.5 1.6 1 0 0 1 1 1 0 Deltaretrovirus Tax protein MFS_2 PF13347.6 NODE_28937_length_748_cov_3.426367_g22821_i0forward_frame_1 - 4e-51 173.9 13.3 4.7e-51 173.7 13.3 1.0 1 0 0 1 1 1 1 MFS/sugar transport protein DUF1077 PF06417.12 NODE_28937_length_748_cov_3.426367_g22821_i0forward_frame_1 - 0.17 11.9 1.5 7.6 6.6 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1077) MscL PF01741.18 NODE_28937_length_748_cov_3.426367_g22821_i0forward_frame_1 - 1.2 9.5 6.4 0.78 10.0 0.1 2.6 1 1 1 2 2 2 0 Large-conductance mechanosensitive channel, MscL DUF4006 PF13179.6 NODE_28898_length_749_cov_15.645658_g22785_i0reverse_frame_1 - 0.15 12.0 2.0 0.52 10.3 2.0 1.9 1 0 0 1 1 1 0 Family of unknown function (DUF4006) DUF4407 PF14362.6 NODE_28832_length_750_cov_93.839161_g22723_i0forward_frame_1 - 3.8 6.8 6.0 4.4 6.6 5.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TMP-TENI PF02581.17 NODE_28825_length_750_cov_158.984615_g22717_i0forward_frame_1 - 5e-53 179.1 0.0 6.2e-53 178.8 0.0 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase FlpD PF02662.16 NODE_28825_length_750_cov_158.984615_g22717_i0forward_frame_1 - 0.12 12.4 0.1 0.24 11.4 0.1 1.5 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit KASH_CCD PF14662.6 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 0.00043 20.2 10.8 0.01 15.7 1.8 2.6 1 1 1 2 2 2 2 Coiled-coil region of CCDC155 or KASH Rnk_N PF14760.6 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 0.012 16.0 0.0 4.2 7.9 0.1 3.4 4 0 0 4 4 4 0 Rnk N-terminus DUF1192 PF06698.11 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 0.019 15.0 3.1 15 5.7 0.1 4.3 4 0 0 4 4 4 0 Protein of unknown function (DUF1192) T2SSM_b PF10741.9 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 0.042 13.7 0.0 0.12 12.2 0.0 1.8 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M subtype b NYD-SP28 PF14772.6 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 0.079 13.0 14.5 2.7 8.1 5.0 4.0 1 1 2 3 3 3 0 Sperm tail Spc7 PF08317.11 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 0.22 10.4 17.0 0.49 9.2 5.8 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein BRE1 PF08647.11 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 0.64 10.1 14.5 2.5 8.2 2.2 3.2 1 1 2 3 3 3 0 BRE1 E3 ubiquitin ligase Atg14 PF10186.9 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 0.79 8.8 21.0 2.3 7.2 3.0 2.1 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 RPW8 PF05659.11 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 1.9 8.2 10.3 8.7 6.0 0.1 3.7 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 UPF0242 PF06785.11 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 4.4 7.4 17.0 1.1 9.3 3.2 2.3 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Tup_N PF08581.10 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 4.5 7.7 11.7 2.5 8.5 1.9 3.3 2 2 0 2 2 2 0 Tup N-terminal DUF641 PF04859.12 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 5.7 7.3 14.5 4.3 7.7 2.0 3.3 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) TMPIT PF07851.13 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 6.3 6.0 11.8 6.4 5.9 3.9 2.4 1 1 2 3 3 3 0 TMPIT-like protein TMF_DNA_bd PF12329.8 NODE_28807_length_750_cov_1105.546853_g22701_i0reverse_frame_1 - 8.3 6.5 26.7 5.5 7.1 0.5 4.5 1 1 4 5 5 5 0 TATA element modulatory factor 1 DNA binding Peptidase_C74 PF12387.8 NODE_28799_length_751_cov_44.026536_g22695_i0forward_frame_3 - 0.24 10.8 0.3 0.39 10.2 0.3 1.4 1 0 0 1 1 1 0 Pestivirus NS2 peptidase DEC-1_N PF04625.13 NODE_28799_length_751_cov_44.026536_g22695_i0forward_frame_2 - 2.2 7.2 6.3 3.4 6.6 6.3 1.4 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Formyl_trans_N PF00551.19 NODE_28797_length_751_cov_91.622905_g22693_i0reverse_frame_3 - 3.8e-22 78.9 0.0 5.8e-22 78.3 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks83.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks83.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks83.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks83.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:58 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- N_formyltrans_C PF18216.1 NODE_28797_length_751_cov_91.622905_g22693_i0reverse_frame_2 - 0.011 15.4 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 0 N-formyltransferase dimerization C-terminal domain zf-C3HC4_5 PF17121.5 NODE_28797_length_751_cov_91.622905_g22693_i0forward_frame_3 - 0.13 12.1 0.9 1.7 8.6 0.5 2.5 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF2417 PF10329.9 NODE_28754_length_752_cov_2.832636_g22657_i0reverse_frame_2 - 0.055 12.9 0.1 0.08 12.3 0.1 1.1 1 0 0 1 1 1 0 Region of unknown function (DUF2417) Sigma_reg_N PF13800.6 NODE_28754_length_752_cov_2.832636_g22657_i0forward_frame_3 - 4.8 7.5 6.2 8.4 6.8 0.1 3.4 4 0 0 4 4 4 0 Sigma factor regulator N-terminal DUF1378 PF07125.11 NODE_28751_length_752_cov_3.948396_g22654_i0reverse_frame_2 - 0.43 10.8 2.4 0.61 10.3 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1378) Ion_trans PF00520.31 NODE_28751_length_752_cov_3.948396_g22654_i0forward_frame_2 - 0.39 9.9 3.2 0.65 9.2 3.2 1.3 1 0 0 1 1 1 0 Ion transport protein DUF533 PF04391.12 NODE_28743_length_752_cov_107.309623_g22646_i0forward_frame_3 - 0.14 11.7 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF533) FAST_1 PF06743.15 NODE_28732_length_752_cov_231.264993_g22637_i0reverse_frame_3 - 0.0014 18.5 1.5 0.62 10.1 0.0 3.9 2 1 3 5 5 5 1 FAST kinase-like protein, subdomain 1 DUF4235 PF14019.6 NODE_28732_length_752_cov_231.264993_g22637_i0reverse_frame_3 - 0.029 14.4 0.4 0.2 11.7 0.0 2.6 3 1 0 3 3 3 0 Protein of unknown function (DUF4235) GDE_N PF12439.8 NODE_28730_length_752_cov_244.440725_g22635_i0reverse_frame_3 - 0.026 14.0 0.0 0.042 13.3 0.0 1.3 1 0 0 1 1 1 0 Glycogen debranching enzyme N terminal IL4_i_Ig PF18258.1 NODE_28730_length_752_cov_244.440725_g22635_i0forward_frame_3 - 0.015 15.5 0.1 0.026 14.7 0.1 1.4 1 0 0 1 1 1 0 Interleukin-4 inducing immunoglobulin-binding domain MIP PF00230.20 ORF98412 - 3.6e-14 53.0 0.7 6e-14 52.3 0.7 1.4 1 1 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF98412 - 0.039 13.4 0.2 0.11 11.9 0.2 1.8 1 0 0 1 1 1 0 Transmembrane alpha-helix domain His_Phos_1 PF00300.22 ORF96050 - 2.5e-17 63.2 0.0 6.6e-16 58.6 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) His_Phos_2 PF00328.22 ORF96050 - 0.0038 16.6 0.2 0.016 14.6 0.0 1.7 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 2) ATG101 PF07855.12 ORF94347 - 0.022 14.7 0.2 0.039 13.9 0.2 1.5 1 0 0 1 1 1 0 Autophagy-related protein 101 LPD11 PF18824.1 ORF94347 - 0.025 14.7 2.0 0.059 13.4 0.0 2.5 3 0 0 3 3 3 0 Large polyvalent protein-associated domain 11 His_Phos_1 PF00300.22 ORF90464 - 2.5e-17 63.2 0.0 6.6e-16 58.6 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) His_Phos_2 PF00328.22 ORF90464 - 0.0038 16.6 0.2 0.016 14.6 0.0 1.7 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 2) His_Phos_1 PF00300.22 ORF84887 - 2.5e-17 63.2 0.0 6.6e-16 58.6 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) His_Phos_2 PF00328.22 ORF84887 - 0.0038 16.6 0.2 0.016 14.6 0.0 1.7 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 2) MIP PF00230.20 ORF84416 - 3.6e-14 53.0 0.7 6e-14 52.3 0.7 1.4 1 1 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF84416 - 0.039 13.4 0.2 0.11 11.9 0.2 1.8 1 0 0 1 1 1 0 Transmembrane alpha-helix domain NAD_binding_3 PF03447.16 ORF80234 - 0.16 12.6 0.0 0.28 11.8 0.0 1.3 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain SNAP PF14938.6 ORF74471 - 4.4e-48 164.1 10.0 5.2e-48 163.9 10.0 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP DHR-2 PF06920.13 ORF74471 - 0.007 15.1 2.3 0.0082 14.8 0.8 1.8 1 1 1 2 2 2 1 Dock homology region 2 TPR_7 PF13176.6 ORF74471 - 0.026 14.6 3.5 24 5.3 0.0 3.5 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF74471 - 0.062 14.1 0.4 2.2 9.3 0.2 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF74471 - 0.094 12.9 8.6 0.41 10.9 1.9 3.2 4 0 0 4 4 4 0 Tetratricopeptide repeat ATPgrasp_Ter PF15632.6 ORF74471 - 0.14 11.9 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon TPR_6 PF13174.6 ORF74471 - 0.26 12.0 1.9 2.9 8.7 0.0 2.8 2 1 0 2 2 2 0 Tetratricopeptide repeat MATH PF00917.26 ORF74471 - 1.6 8.9 5.0 0.41 10.8 0.2 2.4 3 0 0 3 3 3 0 MATH domain MIP PF00230.20 ORF73206 - 3.2e-12 46.6 2.3 9.4e-12 45.1 2.3 1.7 1 1 0 1 1 1 1 Major intrinsic protein DUF1418 PF07214.12 ORF73206 - 0.75 9.7 2.7 4.8 7.1 0.0 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF1418) His_Phos_1 PF00300.22 ORF70114 - 8.3e-37 126.8 0.1 2.6e-30 105.6 0.2 2.0 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) TAF6_C PF07571.13 ORF70114 - 0.15 12.4 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 TAF6 C-terminal HEAT repeat domain UIM PF02809.20 ORF67443 - 0.04 13.8 0.3 0.04 13.8 0.3 2.4 3 0 0 3 3 3 0 Ubiquitin interaction motif TSNAXIP1_N PF15739.5 ORF61735 - 0.86 10.0 7.1 0.14 12.5 0.5 2.8 1 1 2 3 3 3 0 Translin-associated factor X-interacting N-terminus Tim17 PF02466.19 ORF61439 - 0.11 12.9 0.2 0.18 12.2 0.2 1.5 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family EF-hand_7 PF13499.6 ORF60992 - 7.7e-06 26.3 0.4 1.5e-05 25.4 0.4 1.4 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF60992 - 2e-05 24.3 0.4 3.8e-05 23.4 0.4 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_4 PF12763.7 ORF60992 - 7e-05 22.7 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 Cytoskeletal-regulatory complex EF hand EF-hand_1 PF00036.32 ORF60992 - 0.00017 20.9 0.3 0.0084 15.6 0.1 2.5 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF60992 - 0.0049 16.7 0.2 1.1 9.4 0.1 2.6 2 0 0 2 2 2 1 EF-hand domain UBA PF00627.31 ORF60992 - 0.13 12.2 0.0 0.43 10.5 0.0 1.9 2 0 0 2 2 2 0 UBA/TS-N domain Ribosomal_S15 PF00312.22 ORF59051 - 4.3e-16 58.9 2.2 6.8e-16 58.3 2.2 1.3 1 0 0 1 1 1 1 Ribosomal protein S15 Leucyl-specific PF14795.6 ORF5884 - 0.00052 20.0 3.5 0.082 13.0 0.0 3.1 3 0 0 3 3 3 2 Leucine-tRNA synthetase-specific domain Pox_A32 PF04665.12 ORF55368 - 3.3e-05 23.5 0.0 4.4e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Poxvirus A32 protein Ank_5 PF13857.6 ORF49498 - 6.8e-19 67.7 1.0 2.7e-09 37.1 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF49498 - 9.1e-13 48.0 0.7 6.9e-05 23.1 0.1 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ank_2 PF12796.7 ORF49498 - 2.7e-12 47.1 0.9 5.5e-12 46.1 0.9 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF49498 - 2.7e-12 45.7 0.1 4.6e-05 23.5 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF49498 - 7.9e-12 45.5 0.2 6.4e-05 23.4 0.1 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) PEGA PF08308.11 ORF49498 - 0.0094 15.8 0.0 0.24 11.3 0.0 2.6 1 1 1 2 2 2 1 PEGA domain Choline_transpo PF04515.12 ORF49442 - 5e-38 131.1 10.2 6.2e-38 130.8 10.2 1.0 1 0 0 1 1 1 1 Plasma-membrane choline transporter DUF1345 PF07077.11 ORF49442 - 0.071 12.8 0.2 0.071 12.8 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1345) Imm5 PF14423.6 ORF45329 - 8.1e-05 22.9 2.6 8.1e-05 22.9 2.6 2.3 1 1 1 2 2 2 1 Immunity protein Imm5 BAG6 PF12057.8 ORF45329 - 0.0059 16.3 0.6 0.037 13.7 0.1 2.4 3 0 0 3 3 3 1 BCL2-associated athanogene 6 Spore_III_AB PF09548.10 ORF45329 - 0.01 15.9 0.8 0.01 15.9 0.8 2.0 2 1 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) CLZ PF16526.5 ORF45329 - 0.049 14.0 2.7 0.7 10.3 0.1 3.3 3 1 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ZapB PF06005.12 ORF45329 - 0.26 11.7 5.8 0.12 12.9 1.8 2.4 2 2 0 2 2 2 0 Cell division protein ZapB GrpE PF01025.19 ORF45329 - 0.84 9.3 17.6 0.11 12.2 8.8 2.8 1 1 1 2 2 2 0 GrpE Tsg PF04668.12 ORF45329 - 1.9 9.1 4.6 2.3 8.9 0.5 2.4 1 1 1 2 2 2 0 Twisted gastrulation (Tsg) protein conserved region DUF4795 PF16043.5 ORF45329 - 2.1 7.9 17.4 5.4 6.6 4.7 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) E2F_CC-MB PF16421.5 ORF45329 - 8.2 6.9 10.9 20 5.6 2.1 3.2 1 1 1 2 2 2 0 E2F transcription factor CC-MB domain Tim17 PF02466.19 ORF44409 - 0.00038 20.8 0.0 0.00069 20.0 0.0 1.5 1 1 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family AGTRAP PF06396.11 ORF44409 - 0.054 13.3 0.6 0.086 12.6 0.6 1.3 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) HSP70 PF00012.20 ORF37388 - 2.2e-20 72.4 0.4 1.2e-10 40.3 0.0 2.1 1 1 1 2 2 2 2 Hsp70 protein NifW PF03206.14 ORF37388 - 0.046 14.2 0.0 0.08 13.5 0.0 1.5 1 1 0 1 1 1 0 Nitrogen fixation protein NifW NPIP PF06409.11 ORF37229 - 0.083 11.9 0.3 0.15 11.1 0.3 1.4 1 0 0 1 1 1 0 Nuclear pore complex interacting protein (NPIP) Chloroa_b-bind PF00504.21 ORF36538 - 1.1e-35 123.6 1.2 3.9e-35 121.8 0.1 1.9 2 0 0 2 2 2 1 Chlorophyll A-B binding protein Spidroin_N PF16763.5 ORF3437 - 0.024 14.7 1.7 0.024 14.7 1.7 1.9 2 0 0 2 2 2 0 Major ampullate spidroin 1, spider silk protein 1, N-term MAR_sialic_bdg PF10564.9 ORF3217 - 0.059 13.4 0.0 0.18 11.9 0.0 1.8 1 0 0 1 1 1 0 Sialic-acid binding micronemal adhesive repeat ubiquitin PF00240.23 ORF27943 - 2.1e-06 27.4 0.8 3e-06 26.9 0.8 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF27943 - 6.3e-05 22.7 0.5 0.00011 22.0 0.5 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407_C PF13373.6 ORF27943 - 0.00022 21.4 0.0 0.0005 20.3 0.0 1.6 1 1 0 1 1 1 1 DUF2407 C-terminal domain Rad60-SLD_2 PF13881.6 ORF27943 - 0.0031 17.6 0.3 0.0062 16.6 0.3 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like SUR7 PF06687.12 ORF27943 - 0.05 13.2 0.1 0.073 12.7 0.1 1.4 1 0 0 1 1 1 0 SUR7/PalI family DUF2813 PF11398.8 ORF27293 - 7.7e-32 111.0 0.6 1.7e-31 109.8 0.3 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2813) Amidohydro_3 PF07969.11 ORF27293 - 0.02 14.4 0.0 0.024 14.1 0.0 1.1 1 0 0 1 1 1 0 Amidohydrolase family Toprim_2 PF13155.6 ORF27293 - 0.11 12.9 0.0 0.21 12.1 0.0 1.4 1 0 0 1 1 1 0 Toprim-like ADH_zinc_N PF00107.26 ORF26554 - 2.2e-10 40.6 0.0 3.2e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF26554 - 1.6e-05 26.0 0.0 4.2e-05 24.6 0.0 1.7 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ETC_C1_NDUFA4 PF04800.12 ORF26554 - 0.15 12.3 0.2 1.7 8.9 0.0 2.2 2 0 0 2 2 2 0 ETC complex I subunit conserved region PH PF00169.29 ORF22705 - 0.01 16.4 0.8 0.019 15.5 0.6 1.6 2 0 0 2 2 2 0 PH domain VPS13_C PF16909.5 ORF22705 - 0.017 14.9 0.4 0.027 14.2 0.4 1.2 1 0 0 1 1 1 0 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 ORF22705 - 0.14 12.6 0.0 0.31 11.4 0.0 1.5 2 0 0 2 2 2 0 Autophagy-related protein C terminal domain LcnG-beta PF11632.8 ORF22705 - 0.93 9.5 0.0 0.93 9.5 0.0 2.7 3 0 0 3 3 3 0 Lactococcin G-beta DUF3372 PF11852.8 ORF22509 - 6.7 6.2 8.8 7.7 6.0 2.8 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3372) DUF418 PF04235.12 ORF21755 - 0.12 12.3 2.6 0.15 11.9 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF418) Arrestin_N PF00339.29 ORF21556 - 1.9e-14 54.0 0.1 7.5e-14 52.0 0.0 1.8 2 0 0 2 2 2 1 Arrestin (or S-antigen), N-terminal domain Rgp1 PF08737.10 ORF21556 - 0.057 12.6 0.2 11 5.0 0.0 2.6 3 0 0 3 3 3 0 Rgp1 Clathrin_lg_ch PF01086.17 ORF19962 - 7.7e-15 55.6 17.6 9.5e-15 55.3 17.6 1.1 1 0 0 1 1 1 1 Clathrin light chain N1221 PF07923.13 ORF19962 - 0.019 14.2 3.2 0.028 13.6 3.2 1.2 1 0 0 1 1 1 0 N1221-like protein Paz_1 PF18349.1 ORF19962 - 0.03 14.3 1.7 0.04 13.9 0.8 1.6 1 1 0 1 1 1 0 PAZ domain Rgp1 PF08737.10 ORF19962 - 1.2 8.3 6.4 1.5 7.9 6.4 1.1 1 0 0 1 1 1 0 Rgp1 Mvb12 PF09452.10 ORF19962 - 3.7 8.0 7.3 1.9 9.0 2.7 2.4 1 1 1 2 2 2 0 ESCRT-I subunit Mvb12 LMBR1 PF04791.16 ORF19962 - 5.6 5.8 5.0 6.8 5.5 5.0 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Abhydrolase_1 PF00561.20 ORF19179 - 7.2e-22 78.3 0.0 1.2e-21 77.5 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF19179 - 2.2e-15 56.6 0.0 2.9e-15 56.2 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF19179 - 1.1e-07 32.7 0.0 1.4e-07 32.4 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF915 PF06028.11 ORF19179 - 0.00018 20.9 0.1 0.00018 20.9 0.1 2.2 2 1 1 3 3 3 1 Alpha/beta hydrolase of unknown function (DUF915) Abhydrolase_3 PF07859.13 ORF19179 - 0.00026 20.9 0.0 0.00045 20.1 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold PGAP1 PF07819.13 ORF19179 - 0.0028 17.4 0.0 0.004 16.9 0.0 1.3 1 1 0 1 1 1 1 PGAP1-like protein Esterase PF00756.20 ORF19179 - 0.0079 15.9 0.0 0.019 14.6 0.0 1.6 2 0 0 2 2 2 1 Putative esterase Ndr PF03096.14 ORF19179 - 0.024 13.4 0.0 0.063 12.0 0.0 1.7 1 1 1 2 2 2 0 Ndr family LIDHydrolase PF10230.9 ORF19179 - 0.025 14.2 0.0 0.068 12.7 0.0 1.7 1 1 1 2 2 2 0 Lipid-droplet associated hydrolase Abhydrolase_2 PF02230.16 ORF19179 - 0.066 13.0 0.0 7.7 6.2 0.0 2.9 3 0 0 3 3 3 0 Phospholipase/Carboxylesterase Palm_thioest PF02089.15 ORF19179 - 0.085 12.7 0.0 0.22 11.3 0.0 1.6 2 0 0 2 2 2 0 Palmitoyl protein thioesterase ubiquitin PF00240.23 ORF18957 - 2.1e-06 27.4 0.8 3e-06 26.9 0.8 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF18957 - 6.3e-05 22.7 0.5 0.00011 22.0 0.5 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407_C PF13373.6 ORF18957 - 0.00022 21.4 0.0 0.0005 20.3 0.0 1.6 1 1 0 1 1 1 1 DUF2407 C-terminal domain Rad60-SLD_2 PF13881.6 ORF18957 - 0.0031 17.6 0.3 0.0062 16.6 0.3 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like SUR7 PF06687.12 ORF18957 - 0.05 13.2 0.1 0.073 12.7 0.1 1.4 1 0 0 1 1 1 0 SUR7/PalI family Fasciclin PF02469.22 ORF17654 - 1.2e-26 93.4 0.0 4.8e-22 78.5 0.0 2.4 2 1 0 2 2 2 2 Fasciclin domain MFAP1 PF06991.11 ORF17599 - 1.7e-57 194.8 29.6 2e-57 194.5 29.6 1.1 1 0 0 1 1 1 1 Microfibril-associated/Pre-mRNA processing Dicer_dimer PF03368.14 ORF15707 - 0.0042 17.2 0.0 0.01 16.0 0.0 1.6 1 0 0 1 1 1 1 Dicer dimerisation domain Peptidase_S41_N PF11918.8 ORF148743 - 0.054 13.7 0.4 1.1 9.5 0.0 2.2 2 0 0 2 2 2 0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP DUF1765 PF08578.10 ORF147182 - 0.01 16.3 1.3 0.046 14.2 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1765) Vac14_Fig4_bd PF11916.8 ORF147182 - 0.037 13.7 0.1 0.13 11.9 0.2 1.8 2 0 0 2 2 2 0 Vacuolar protein 14 C-terminal Fig4p binding RRT14 PF17075.5 ORF147182 - 4.3 7.4 17.4 9.5 6.3 8.6 2.1 1 1 1 2 2 2 0 Regular of rDNA transcription protein 14 CLZ PF16526.5 ORF138376 - 0.12 12.8 0.0 0.25 11.7 0.0 1.6 1 1 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels SgrT PF15894.5 ORF138376 - 0.16 11.9 0.0 0.29 11.1 0.0 1.4 1 0 0 1 1 1 0 Inhibitor of glucose uptake transporter SgrT CCDC158 PF15921.5 ORF137614 - 5.7 4.6 6.7 6.4 4.5 6.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 158 Pkinase PF00069.25 ORF136311 - 2.4e-46 158.3 1.2 3.1e-46 157.9 1.2 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF136311 - 1.4e-21 77.0 0.1 1.8e-21 76.6 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF136311 - 5e-07 29.3 0.0 6.9e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like PIP49_C PF12260.8 ORF136311 - 0.1 12.2 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 MIP PF00230.20 ORF135985 - 3.6e-14 53.0 0.7 6e-14 52.3 0.7 1.4 1 1 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF135985 - 0.039 13.4 0.2 0.11 11.9 0.2 1.8 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Med26 PF08711.11 ORF134321 - 2.3e-06 27.5 0.1 6.3e-06 26.1 0.1 1.8 2 0 0 2 2 2 1 TFIIS helical bundle-like domain Zip PF02535.22 ORF132256 - 3.8e-27 95.4 0.0 4.2e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter DUF4520 PF15016.6 ORF132256 - 0.086 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4520) DUF3397 PF11877.8 ORF132256 - 2 8.6 6.0 1.7 8.9 2.9 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF3397) MIP PF00230.20 ORF131368 - 3.6e-14 53.0 0.7 6e-14 52.3 0.7 1.4 1 1 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF131368 - 0.039 13.4 0.2 0.11 11.9 0.2 1.8 1 0 0 1 1 1 0 Transmembrane alpha-helix domain WD40 PF00400.32 ORF126351 - 0.00013 22.6 0.7 3.9 8.5 0.0 4.4 4 1 0 4 4 4 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF126351 - 0.041 14.2 0.1 3.8 7.9 0.0 3.1 3 0 0 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain NUMOD4 PF07463.11 ORF126351 - 0.062 13.5 0.2 0.45 10.8 0.2 2.3 1 1 0 1 1 1 0 NUMOD4 motif Arrestin_N PF00339.29 ORF122919 - 1.9e-14 54.0 0.1 7.5e-14 52.0 0.0 1.8 2 0 0 2 2 2 1 Arrestin (or S-antigen), N-terminal domain Rgp1 PF08737.10 ORF122919 - 0.057 12.6 0.2 11 5.0 0.0 2.6 3 0 0 3 3 3 0 Rgp1 Nop52 PF05997.12 ORF122620 - 3.9e-07 30.1 0.2 8.3e-07 29.0 0.1 1.7 2 0 0 2 2 2 1 Nucleolar protein,Nop52 CCDC158 PF15921.5 ORF12092 - 5.7 4.6 6.7 6.4 4.5 6.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 158 Regnase_1_C PF18561.1 ORF120177 - 0.035 13.8 0.1 0.095 12.4 0.0 1.7 2 0 0 2 2 2 0 Endoribonuclease Regnase 1/ ZC3H12 C-terminal domain DAO PF01266.24 ORF118383 - 8e-27 94.7 0.0 9.8e-27 94.4 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase PyrBI_leader PF08052.11 ORF115295 - 0.029 14.3 5.7 16 5.6 0.1 4.4 4 0 0 4 4 4 0 PyrBI operon leader peptide Fer4_14 PF13394.6 ORF115295 - 0.058 13.5 9.3 94 3.2 0.1 5.0 5 0 0 5 5 5 0 4Fe-4S single cluster domain Stc1 PF12898.7 ORF115295 - 0.55 10.8 21.5 28 5.3 3.7 4.9 1 1 2 3 3 3 0 Stc1 domain EF-hand_7 PF13499.6 ORF115010 - 4.6e-11 43.0 6.2 9.9e-05 22.7 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF115010 - 7.7e-08 31.7 12.3 0.01 15.7 0.7 4.4 4 1 1 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 ORF115010 - 2.4e-07 29.8 8.1 0.062 12.9 0.1 3.9 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF115010 - 5.7e-07 29.3 3.4 0.021 14.6 0.5 3.0 2 1 0 2 2 2 2 EF-hand domain pair DUF5580 PF17743.1 ORF115010 - 0.003 16.2 0.0 0.0038 15.8 0.0 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5580) EF-hand_5 PF13202.6 ORF115010 - 2.5 7.7 6.6 26 4.5 0.0 3.9 4 0 0 4 4 4 0 EF hand Asp PF00026.23 ORF113725 - 1.2e-25 90.6 0.1 1.4e-25 90.4 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF113725 - 0.036 13.8 0.0 0.094 12.5 0.0 1.7 2 0 0 2 2 2 0 Xylanase inhibitor C-terminal WBP-1 PF11669.8 ORF113725 - 0.2 12.3 1.1 0.29 11.8 0.3 1.6 2 0 0 2 2 2 0 WW domain-binding protein 1 CCDC158 PF15921.5 ORF109813 - 5.7 4.6 6.7 6.4 4.5 6.7 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 158 MIP PF00230.20 ORF109309 - 3.6e-14 53.0 0.7 6e-14 52.3 0.7 1.4 1 1 0 1 1 1 1 Major intrinsic protein SKG6 PF08693.10 ORF109309 - 0.039 13.4 0.2 0.11 11.9 0.2 1.8 1 0 0 1 1 1 0 Transmembrane alpha-helix domain DUF4647 PF15504.6 ORF108323 - 0.0011 18.2 2.4 0.0015 17.8 2.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4647) DAG_kinase_N PF14513.6 ORF108323 - 0.011 15.9 2.5 0.011 15.9 2.5 1.7 2 0 0 2 2 2 0 Diacylglycerol kinase N-terminus RIG-I_C-RD PF11648.8 ORF108323 - 0.025 14.8 0.1 0.046 14.0 0.1 1.4 1 0 0 1 1 1 0 C-terminal domain of RIG-I Dpy-30 PF05186.13 ORF105741 - 4e-06 26.4 0.1 0.098 12.4 0.0 2.3 2 0 0 2 2 2 2 Dpy-30 motif Pkinase PF00069.25 ORF104036 - 1.8e-55 188.1 0.1 2.1e-55 188.0 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF104036 - 2.2e-30 105.8 0.0 3e-30 105.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF104036 - 8e-05 22.1 0.0 9.5e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF104036 - 0.00013 20.9 0.0 0.00016 20.6 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF104036 - 0.0086 15.4 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family YukC PF10140.9 ORF104036 - 0.093 11.5 0.0 0.13 11.0 0.0 1.3 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Seadorna_VP7 PF07387.11 ORF104036 - 0.12 11.5 0.1 0.18 10.8 0.1 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 Myb_DNA-bind_2 PF08914.11 ORF103977 - 8e-15 54.8 2.1 1.4e-14 54.0 2.1 1.4 1 0 0 1 1 1 1 Rap1 Myb domain BRCT_2 PF16589.5 ORF103977 - 0.00017 21.9 0.0 0.0003 21.1 0.0 1.4 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain FAM76 PF16046.5 ORF103584 - 0.77 9.1 7.0 1 8.7 7.0 1.1 1 0 0 1 1 1 0 FAM76 protein ubiquitin PF00240.23 ORF101676 - 2.1e-06 27.4 0.8 3e-06 26.9 0.8 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 ORF101676 - 6.3e-05 22.7 0.5 0.00011 22.0 0.5 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407_C PF13373.6 ORF101676 - 0.00022 21.4 0.0 0.0005 20.3 0.0 1.6 1 1 0 1 1 1 1 DUF2407 C-terminal domain Rad60-SLD_2 PF13881.6 ORF101676 - 0.0031 17.6 0.3 0.0062 16.6 0.3 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like SUR7 PF06687.12 ORF101676 - 0.05 13.2 0.1 0.073 12.7 0.1 1.4 1 0 0 1 1 1 0 SUR7/PalI family zf-RING_UBOX PF13445.6 ORF10005 - 7.5e-08 32.3 3.7 1.7e-07 31.1 3.7 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF10005 - 4.6e-07 29.6 5.8 4.6e-07 29.6 5.8 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF10005 - 2.4e-06 27.4 9.5 5.9e-06 26.1 9.5 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF10005 - 5.5e-06 26.6 9.2 5.5e-06 26.6 9.2 2.0 3 0 0 3 3 2 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF10005 - 1e-05 25.3 8.2 1e-05 25.3 8.2 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF10005 - 0.0014 18.4 6.3 0.0043 16.8 6.3 1.8 1 1 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-C3HC4_2 PF13923.6 ORF10005 - 0.0035 17.1 9.3 0.014 15.2 8.8 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF10005 - 0.0072 16.5 9.9 0.011 15.8 8.0 2.4 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF10005 - 0.022 14.6 9.4 0.035 14.0 7.0 2.3 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF10005 - 0.026 14.6 4.4 0.48 10.5 2.1 3.0 3 0 0 3 3 3 0 Anaphase-promoting complex subunit 11 RING-H2 finger Pox_D2 PF04701.13 ORF10005 - 0.039 14.1 3.6 0.18 12.0 2.2 2.4 1 1 1 2 2 2 0 Pox virus D2 protein Knl1_RWD_C PF18210.1 ORF10005 - 0.1 13.1 0.1 0.31 11.6 0.1 1.8 2 0 0 2 2 2 0 Knl1 RWD C-terminal domain FANCL_C PF11793.8 ORF10005 - 2.6 8.3 11.6 4.9 7.4 7.9 2.8 2 1 0 2 2 2 0 FANCL C-terminal domain Ank_2 PF12796.7 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 3.6e-31 107.6 0.0 3.9e-15 56.2 0.0 2.8 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 1.6e-24 85.9 0.4 1e-07 32.3 0.0 4.3 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 3.1e-22 78.0 1.8 0.00029 21.1 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 2.4e-21 73.5 1.2 0.0066 16.9 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_1 - 5.9e-21 74.3 0.9 3.6e-07 30.3 0.0 4.1 1 1 3 4 4 4 4 Ankyrin repeats (many copies) PADR1 PF08063.12 NODE_29015_length_746_cov_99.001406_g22888_i0reverse_frame_1 - 7 6.5 11.9 0.36 10.6 0.5 3.0 3 0 0 3 3 3 0 PADR1 (NUC008) domain Polysacc_syn_2C PF08485.10 NODE_29015_length_746_cov_99.001406_g22888_i0forward_frame_1 - 0.00015 21.4 0.7 0.13 11.9 0.1 2.2 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein C-terminal Leader_Trp PF08255.11 NODE_29015_length_746_cov_99.001406_g22888_i0forward_frame_1 - 1.5 8.9 8.4 5.4 7.3 1.3 3.2 2 0 0 2 2 2 0 Trp-operon Leader Peptide RecQ_Zn_bind PF16124.5 NODE_29015_length_746_cov_99.001406_g22888_i0forward_frame_1 - 4.5 8.1 10.5 11 6.8 3.2 2.4 2 0 0 2 2 2 0 RecQ zinc-binding TYW3 PF02676.14 NODE_28988_length_747_cov_3.508427_g22866_i0forward_frame_1 - 0.073 12.4 0.5 0.12 11.7 0.5 1.2 1 0 0 1 1 1 0 Methyltransferase TYW3 EF-hand_1 PF00036.32 NODE_28939_length_748_cov_2.866760_g22823_i0reverse_frame_2 - 0.031 13.8 0.1 1.2 8.8 0.1 2.8 2 0 0 2 2 2 0 EF hand Hydantoinase_B PF02538.14 NODE_28937_length_748_cov_3.426367_g22821_i0forward_frame_2 - 0.24 9.7 0.3 0.5 8.7 0.0 1.5 2 0 0 2 2 2 0 Hydantoinase B/oxoprolinase Deltameth_res PF16020.5 NODE_28933_length_748_cov_81.353436_g22817_i0forward_frame_3 - 0.056 13.3 0.2 0.17 11.8 0.2 1.8 1 0 0 1 1 1 0 Deltamethrin resistance SBF2 PF12335.8 NODE_28933_length_748_cov_81.353436_g22817_i0forward_frame_3 - 0.16 11.6 2.6 0.29 10.7 0.5 2.1 2 0 0 2 2 2 0 Myotubularin protein CoatB PF10389.9 NODE_28873_length_749_cov_151.603641_g22760_i0reverse_frame_3 - 0.35 10.7 3.4 0.86 9.5 3.4 1.7 1 0 0 1 1 1 0 Bacteriophage coat protein B Presenilin PF01080.17 NODE_28873_length_749_cov_151.603641_g22760_i0forward_frame_2 - 6.5 5.4 6.7 8 5.1 6.7 1.2 1 0 0 1 1 1 0 Presenilin SseC PF04888.12 NODE_28850_length_749_cov_27038.966387_g6825_i1reverse_frame_3 - 0.0004 20.1 2.9 0.00075 19.2 2.9 1.3 1 0 0 1 1 1 1 Secretion system effector C (SseC) like family Adeno_E3_CR2 PF02439.15 NODE_28848_length_750_cov_2.608392_g22739_i0reverse_frame_2 - 0.31 10.8 6.4 0.63 9.8 3.1 2.6 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 PG_binding_3 PF09374.10 NODE_28837_length_750_cov_85.002797_g22728_i0forward_frame_2 - 3.6e-06 27.1 0.1 0.067 13.5 0.0 3.2 1 1 2 3 3 3 3 Predicted Peptidoglycan domain PG_binding_1 PF01471.18 NODE_28837_length_750_cov_85.002797_g22728_i0forward_frame_2 - 0.016 15.4 0.1 0.36 11.1 0.0 2.6 2 1 0 2 2 2 0 Putative peptidoglycan binding domain Ribosomal_60s PF00428.19 NODE_28837_length_750_cov_85.002797_g22728_i0forward_frame_2 - 0.053 14.1 3.6 0.16 12.5 3.6 1.8 1 0 0 1 1 1 0 60s Acidic ribosomal protein CAV_VP3 PF04771.12 NODE_28837_length_750_cov_85.002797_g22728_i0forward_frame_2 - 0.059 13.5 0.4 0.12 12.5 0.4 1.5 1 0 0 1 1 1 0 Chicken anaemia virus VP-3 protein IBN_N PF03810.19 NODE_28832_length_750_cov_93.839161_g22723_i0forward_frame_2 - 0.008 16.1 0.1 0.02 14.8 0.1 1.8 1 1 0 1 1 1 1 Importin-beta N-terminal domain ThiF PF00899.21 ORF97084 - 2.1e-64 217.2 0.3 2.6e-64 216.9 0.3 1.0 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 ORF97084 - 0.00033 20.9 1.3 0.0027 18.0 1.3 2.0 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 ORF97084 - 0.008 16.6 0.1 0.016 15.6 0.1 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 ORF97084 - 0.061 13.4 0.1 0.22 11.6 0.0 1.8 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase FAD_binding_3 PF01494.19 ORF97084 - 0.13 11.5 0.1 0.18 11.0 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain Ank_2 PF12796.7 ORF95753 - 5.3e-27 94.2 0.1 3.1e-12 46.9 0.2 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF95753 - 3.2e-22 77.9 0.9 3.8e-05 23.9 0.1 4.5 4 0 0 4 4 4 4 Ankyrin repeat Ank_4 PF13637.6 ORF95753 - 7.8e-20 71.0 0.0 1.2e-10 41.7 0.0 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF95753 - 2.2e-18 66.1 1.2 0.00015 21.9 0.1 5.2 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF95753 - 4.3e-18 63.5 0.1 0.017 15.6 0.0 5.2 5 0 0 5 5 5 4 Ankyrin repeat ubiquitin PF00240.23 ORF95753 - 8e-05 22.3 0.0 0.00012 21.7 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family DUF2407 PF10302.9 ORF95753 - 0.025 15.1 0.1 0.047 14.2 0.1 1.4 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Rad60-SLD PF11976.8 ORF95753 - 0.11 12.3 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Spc110_C PF18520.1 ORF90069 - 0.051 13.2 6.3 0.42 10.2 1.4 2.7 2 0 0 2 2 2 0 Spindle pole body component 110 C-terminal domain MFS_1 PF07690.16 ORF89474 - 4.4e-07 29.1 6.5 5.4e-07 28.9 6.5 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily YitT_membrane PF02588.15 ORF89474 - 0.12 11.7 8.9 0.05 12.9 3.4 2.4 1 1 1 2 2 2 0 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DUF3537 PF12056.8 ORF89080 - 0.06 12.2 0.1 0.11 11.3 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3537) Isochorismatase PF00857.20 ORF85751 - 1.2e-11 45.1 0.0 1.6e-11 44.7 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family Vps16_N PF04841.13 ORF85751 - 0.015 14.0 0.1 0.019 13.7 0.1 1.1 1 0 0 1 1 1 0 Vps16, N-terminal region DUF2015 PF09435.10 ORF84399 - 0.035 14.0 0.5 0.11 12.4 0.3 1.8 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF2015) Epimerase_2 PF02350.19 ORF84399 - 0.06 12.2 0.0 0.099 11.5 0.0 1.4 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase Methyltransf_11 PF08241.12 ORF81725 - 7.1e-14 52.2 0.0 1.2e-13 51.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF81725 - 6.5e-12 46.0 0.0 1.2e-11 45.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF81725 - 5.9e-11 42.4 0.0 1.2e-10 41.4 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF81725 - 4.2e-08 33.2 0.0 6.4e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF81725 - 4.9e-08 32.6 0.0 9.6e-08 31.6 0.0 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF81725 - 3.5e-05 24.5 0.0 5.7e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DUF1799 PF08809.11 ORF81725 - 0.04 14.1 0.0 0.09 13.0 0.0 1.6 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) MSL2-CXC PF16682.5 ORF81680 - 3.2 7.9 9.3 11 6.2 4.4 2.7 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 HATPase_c PF02518.26 ORF79921 - 1.5e-21 76.9 0.1 2.5e-21 76.3 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF79921 - 0.034 14.0 0.0 0.064 13.1 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF667 PF05018.13 ORF79921 - 0.045 13.5 1.4 1.8 8.2 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF667) HisKA PF00512.25 ORF79921 - 0.13 12.3 0.3 0.29 11.2 0.3 1.6 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain Rieske PF00355.26 ORF78283 - 2e-12 46.9 0.0 4.2e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 ORF78283 - 4.2e-07 29.9 0.0 6.1e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain zf-A20 PF01754.16 ORF78283 - 0.33 10.9 2.7 0.35 10.9 0.1 2.1 2 0 0 2 2 2 0 A20-like zinc finger GluR_Homer-bdg PF10606.9 ORF70343 - 0.074 13.3 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Homer-binding domain of metabotropic glutamate receptor JIP_LZII PF16471.5 ORF65920 - 0.0023 18.1 1.2 0.0055 16.8 1.2 1.6 1 0 0 1 1 1 1 JNK-interacting protein leucine zipper II SKA2 PF16740.5 ORF65920 - 0.37 10.6 9.3 0.69 9.7 9.3 1.4 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Motile_Sperm PF00635.26 ORF65222 - 1.9e-16 59.8 6.4 1.9e-16 59.8 6.4 2.3 3 0 0 3 3 3 1 MSP (Major sperm protein) domain DUF5001 PF16392.5 ORF65222 - 0.027 14.4 3.8 0.03 14.2 1.1 2.3 2 0 0 2 2 2 0 Ig-like domain TUTF7_u4 PF16631.5 ORF65222 - 2.7 8.7 6.0 3.5 8.3 1.3 2.6 2 1 1 3 3 3 0 Unstructured region 4 on terminal uridylyltransferase 7 eIF-6 PF01912.18 ORF58638 - 2.4e-72 242.5 0.1 3e-72 242.2 0.1 1.1 1 0 0 1 1 1 1 eIF-6 family DNA_primase_lrg PF04104.14 ORF58638 - 0.04 13.3 0.0 0.06 12.7 0.0 1.2 1 0 0 1 1 1 0 Eukaryotic and archaeal DNA primase, large subunit Aldedh PF00171.22 ORF57574 - 1.8e-90 303.7 0.1 2e-90 303.5 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 ORF57574 - 0.039 13.4 0.0 0.088 12.2 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) HATPase_c PF02518.26 ORF56421 - 3.5e-23 82.2 0.2 5.3e-23 81.7 0.2 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF56421 - 0.017 14.9 0.0 0.03 14.1 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF56421 - 0.12 12.4 0.3 0.29 11.2 0.3 1.7 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain PP2C PF00481.21 ORF54119 - 3.3e-51 174.4 0.1 4.2e-51 174.0 0.1 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF54119 - 2e-08 34.2 0.0 1e-07 31.8 0.0 1.8 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 ORF54119 - 2.8e-05 24.1 0.1 0.0032 17.4 0.2 2.1 2 0 0 2 2 2 2 Stage II sporulation protein E (SpoIIE) PQQ PF01011.21 ORF5292 - 8.3e-18 63.4 0.0 4.2e-08 32.7 0.0 2.4 2 0 0 2 2 2 2 PQQ enzyme repeat PQQ_2 PF13360.6 ORF5292 - 2e-06 27.6 0.0 2.7e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 PQQ-like domain PQQ_3 PF13570.6 ORF5292 - 0.25 11.9 8.3 9.7 6.8 2.7 3.2 3 1 0 3 3 3 0 PQQ-like domain DUF5320 PF17253.2 ORF49382 - 0.0027 18.7 0.2 0.006 17.6 0.2 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5320) N_BRCA1_IG PF16158.5 ORF49382 - 0.021 15.5 0.0 0.04 14.7 0.0 1.5 1 1 0 1 1 1 0 Ig-like domain from next to BRCA1 gene Pentapeptide PF00805.22 ORF46711 - 2.3e-21 75.1 26.8 1.1e-07 31.3 2.6 5.6 4 1 2 6 6 6 6 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF46711 - 2.7e-12 46.7 21.0 1.6e-05 25.0 3.9 3.5 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF46711 - 6.2e-08 32.7 12.6 0.0079 16.3 1.8 4.9 3 2 2 5 5 5 5 Pentapeptide repeats (9 copies) CfAFP PF05264.11 ORF46711 - 0.01 15.8 2.1 0.1 12.6 0.2 2.3 2 0 0 2 2 2 0 Choristoneura fumiferana antifreeze protein (CfAFP) Ribosomal_S4e PF00900.20 ORF42957 - 5.2e-33 112.8 0.1 1.4e-32 111.4 0.1 1.8 1 0 0 1 1 1 1 Ribosomal family S4e 40S_S4_C PF16121.5 ORF42957 - 6.3e-16 57.8 0.2 2.6e-15 55.8 0.0 2.0 2 0 0 2 2 2 1 40S ribosomal protein S4 C-terminus RS4NT PF08071.12 ORF42957 - 3.2e-07 30.3 0.1 1e-06 28.7 0.2 1.8 2 0 0 2 2 2 1 RS4NT (NUC023) domain S4 PF01479.25 ORF42957 - 0.0006 19.5 2.1 0.0016 18.1 0.3 2.5 3 0 0 3 3 3 1 S4 domain DUF3857 PF12969.7 ORF42957 - 0.017 15.2 0.0 0.021 14.9 0.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3857) KOW PF00467.29 ORF42957 - 0.022 14.7 0.2 0.022 14.7 0.2 2.0 2 0 0 2 2 2 0 KOW motif Sipho_tail PF05709.11 ORF42957 - 0.073 12.5 0.2 0.12 11.8 0.2 1.4 1 0 0 1 1 1 0 Phage tail protein MSL2-CXC PF16682.5 ORF4266 - 3.2 7.9 9.3 11 6.2 4.4 2.7 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Myotub-related PF06602.14 ORF41058 - 1.5e-61 208.3 2.1 1.9e-61 208.0 2.1 1.1 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain DSPc PF00782.20 ORF41058 - 0.0027 17.5 0.0 0.0065 16.3 0.0 1.6 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 ORF41058 - 0.0033 17.4 0.0 0.0053 16.8 0.0 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 ORF41058 - 0.06 12.9 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein-tyrosine phosphatase AAT PF03417.16 ORF37514 - 0.061 13.0 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase O-FucT PF10250.9 ORF37342 - 1.8e-16 60.8 0.0 2e-16 60.6 0.0 1.1 1 0 0 1 1 1 1 GDP-fucose protein O-fucosyltransferase baeRF_family2 PF18844.1 ORF37342 - 0.027 14.5 0.2 0.054 13.6 0.2 1.5 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 DHHC PF01529.20 ORF37132 - 4.4e-15 56.0 14.9 6.5e-15 55.4 9.1 2.2 2 0 0 2 2 2 2 DHHC palmitoyltransferase DUF2207 PF09972.9 ORF37132 - 0.001 17.9 0.0 0.001 17.9 0.0 1.3 2 0 0 2 2 2 1 Predicted membrane protein (DUF2207) XhlA PF10779.9 ORF37132 - 0.19 11.9 1.9 0.26 11.5 0.4 1.9 2 0 0 2 2 2 0 Haemolysin XhlA PP2 PF14299.6 ORF35673 - 0.028 14.5 0.0 0.051 13.6 0.0 1.5 1 0 0 1 1 1 0 Phloem protein 2 ABC_transp_aux PF09822.9 ORF35673 - 0.067 12.7 0.0 0.39 10.1 0.0 1.9 2 0 0 2 2 2 0 ABC-type uncharacterized transport system Homeobox_KN PF05920.11 ORF32763 - 1.1e-15 57.3 2.4 2.6e-15 56.0 2.4 1.7 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF32763 - 8.5e-06 25.5 0.7 2.3e-05 24.1 0.7 1.8 1 0 0 1 1 1 1 Homeodomain IL4Ra_N PF09238.10 ORF27212 - 0.11 12.9 1.3 0.2 12.0 0.7 1.7 2 0 0 2 2 2 0 Interleukin-4 receptor alpha chain, N-terminal DUF1800 PF08811.11 ORF27212 - 0.13 11.3 0.1 0.15 11.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1800) YjeJ PF15922.5 ORF27169 - 2.3e-131 437.2 3.5 2.6e-131 437.0 3.5 1.0 1 0 0 1 1 1 1 YjeJ-like DUF2489 PF10675.9 ORF27169 - 0.084 12.8 2.4 1.2 9.1 0.1 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2489) IL4Ra_N PF09238.10 ORF25034 - 0.11 12.9 1.3 0.2 12.0 0.7 1.7 2 0 0 2 2 2 0 Interleukin-4 receptor alpha chain, N-terminal DUF1800 PF08811.11 ORF25034 - 0.13 11.3 0.1 0.15 11.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1800) Homeobox_KN PF05920.11 ORF24466 - 9.8e-16 57.4 2.4 2.6e-15 56.0 2.4 1.8 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 ORF24466 - 8.6e-06 25.5 0.7 2.3e-05 24.1 0.7 1.8 1 0 0 1 1 1 1 Homeodomain TCR PF03638.15 ORF18471 - 5.2e-23 81.1 50.4 3.2e-12 46.5 21.0 2.4 2 0 0 2 2 2 2 Tesmin/TSO1-like CXC domain, cysteine-rich domain LAM_C PF12544.8 ORF18318 - 0.021 15.0 3.4 0.021 15.0 3.4 2.6 2 1 1 3 3 3 0 Lysine-2,3-aminomutase DUF4633 PF15464.6 ORF18318 - 0.1 12.8 2.1 1 9.5 0.3 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4633) Cadherin_C_2 PF16492.5 ORF16459 - 0.0018 19.0 0.1 0.28 12.0 0.1 2.5 2 1 0 2 2 2 2 Cadherin cytoplasmic C-terminal MSL2-CXC PF16682.5 ORF150013 - 3.2 7.9 9.3 11 6.2 4.4 2.7 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 YdjC PF04794.12 ORF14514 - 6.6e-58 196.5 0.0 7.5e-58 196.3 0.0 1.0 1 0 0 1 1 1 1 YdjC-like protein ABC_membrane PF00664.23 ORF142253 - 6.8e-26 91.5 4.3 8.2e-26 91.3 4.3 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Pex24p PF06398.11 ORF142253 - 0.22 10.5 3.8 0.29 10.1 3.8 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Insulin_TMD PF17870.1 ORF142253 - 8.9 6.5 7.7 31 4.8 3.5 2.9 2 1 1 3 3 3 0 Insulin receptor trans-membrane segment MSL2-CXC PF16682.5 ORF141273 - 3.2 7.9 9.3 11 6.2 4.4 2.7 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 DUF5320 PF17253.2 ORF138345 - 0.0027 18.7 0.2 0.006 17.6 0.2 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5320) N_BRCA1_IG PF16158.5 ORF138345 - 0.021 15.6 0.0 0.04 14.7 0.0 1.5 1 1 0 1 1 1 0 Ig-like domain from next to BRCA1 gene RicinB_lectin_2 PF14200.6 ORF138087 - 0.0046 17.6 0.2 0.14 12.9 0.1 2.5 2 1 2 4 4 4 3 Ricin-type beta-trefoil lectin domain-like SH3BP5 PF05276.14 ORF136384 - 2.2e-24 86.5 10.4 1.4e-11 44.7 0.2 2.9 2 1 0 2 2 2 2 SH3 domain-binding protein 5 (SH3BP5) DUF4407 PF14362.6 ORF136384 - 3.7e-06 26.5 5.7 0.011 15.2 0.2 2.0 1 1 1 2 2 2 2 Domain of unknown function (DUF4407) DUF948 PF06103.11 ORF136384 - 0.0031 17.7 1.6 7.5 6.9 0.3 3.4 3 1 0 3 3 3 1 Bacterial protein of unknown function (DUF948) TolA_bind_tri PF16331.5 ORF136384 - 0.018 15.1 5.5 0.86 9.7 0.2 3.1 3 0 0 3 3 3 0 TolA binding protein trimerisation DUF2228 PF10228.9 ORF136384 - 0.1 12.3 0.3 0.15 11.8 0.3 1.3 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2228) Cauli_AT PF03233.13 ORF136384 - 0.1 12.5 0.7 0.76 9.7 0.0 2.2 2 1 1 3 3 3 0 Aphid transmission protein Fib_alpha PF08702.10 ORF136384 - 0.18 12.0 1.8 3.1 8.0 1.7 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF724 PF05266.14 ORF136384 - 0.25 11.2 5.5 0.51 10.1 1.6 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF724) WASH-7_C PF14746.6 ORF136384 - 0.49 10.1 4.2 13 5.4 0.1 3.0 2 1 1 3 3 3 0 WASH complex subunit 7, C-terminal Lebercilin PF15619.6 ORF136384 - 1 9.0 13.4 5.5 6.6 6.0 3.0 2 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease COG2 PF06148.11 ORF136384 - 1 9.4 8.2 2.6 8.1 0.2 3.2 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 TSNAXIP1_N PF15739.5 ORF136384 - 1.9 8.9 7.8 2.4 8.6 3.9 2.9 2 1 0 2 2 2 0 Translin-associated factor X-interacting N-terminus Filament PF00038.21 ORF136384 - 2.8 7.4 10.4 3.1 7.3 4.1 2.8 1 1 0 2 2 2 0 Intermediate filament protein Syntaxin-6_N PF09177.11 ORF136384 - 3.2 8.4 7.4 7.4 7.2 3.4 3.0 2 2 0 2 2 2 0 Syntaxin 6, N-terminal LPP PF04728.13 ORF136384 - 4.1 7.9 7.1 5.6 7.4 0.3 3.4 3 0 0 3 3 3 0 Lipoprotein leucine-zipper TPR_MLP1_2 PF07926.12 ORF136384 - 6 7.0 18.6 6.5 6.8 6.0 3.8 3 2 0 3 3 3 0 TPR/MLP1/MLP2-like protein Ank_4 PF13637.6 ORF134333 - 2.5e-07 31.1 1.9 0.00013 22.4 0.3 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF134333 - 4e-07 30.2 0.3 1e-06 28.9 0.2 1.8 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF134333 - 4.2e-05 24.1 0.3 9.3e-05 23.0 0.3 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 ORF134333 - 9.5e-05 22.7 0.9 0.00037 20.8 0.5 2.2 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 ORF134333 - 0.00037 20.7 0.4 0.011 16.2 0.1 3.0 3 0 0 3 3 3 1 Ankyrin repeat EF-hand_6 PF13405.6 ORF134333 - 0.034 14.1 0.1 0.31 11.1 0.0 2.5 2 1 0 2 2 2 0 EF-hand domain FKBP_C PF00254.28 ORF133700 - 2.5e-17 63.0 0.0 3.8e-17 62.4 0.0 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Cylicin_N PF15241.6 ORF131378 - 0.034 14.3 0.1 2.6 8.2 0.0 2.4 2 0 0 2 2 2 0 Cylicin N-terminus Tup_N PF08581.10 ORF130738 - 0.02 15.2 17.1 0.051 13.9 3.3 3.5 3 1 0 3 3 3 0 Tup N-terminal Choline_kin_N PF04428.14 ORF130738 - 0.13 12.0 2.0 0.16 11.7 0.2 2.1 2 0 0 2 2 2 0 Choline kinase N terminus Suf PF05843.14 ORF129815 - 2.7e-15 57.1 0.0 6.1e-06 26.4 0.0 3.1 1 1 2 3 3 3 2 Suppressor of forked protein (Suf) TPR_14 PF13428.6 ORF129815 - 9.5e-08 32.3 4.3 0.017 15.9 0.1 5.5 3 1 3 6 6 6 1 Tetratricopeptide repeat TPR_6 PF13174.6 ORF129815 - 2.8e-05 24.5 4.9 0.15 12.7 0.1 4.7 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF129815 - 3e-05 24.2 1.7 0.59 10.5 0.4 3.8 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF129815 - 4e-05 24.1 0.1 0.14 12.6 0.0 4.0 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF129815 - 7.5e-05 23.3 2.6 0.4 11.4 0.9 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat NRDE-2 PF08424.10 ORF129815 - 0.00011 21.4 0.2 0.065 12.3 0.3 2.5 1 1 1 2 2 2 2 NRDE-2, necessary for RNA interference TPR_8 PF13181.6 ORF129815 - 0.00054 20.0 2.0 0.11 12.8 0.1 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF129815 - 0.0013 18.7 4.9 0.22 11.7 0.2 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat TAF1_subA PF14929.6 ORF129815 - 0.0076 15.7 0.1 0.033 13.6 0.0 1.8 2 0 0 2 2 2 1 TAF RNA Polymerase I subunit A Wzy_C_2 PF11846.8 ORF129815 - 0.029 14.3 0.1 0.12 12.2 0.0 2.0 1 1 1 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal TPR_1 PF00515.28 ORF129815 - 0.052 13.4 0.6 0.4 10.6 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_10 PF13374.6 ORF129815 - 0.5 10.3 4.2 8.8 6.3 0.0 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat Ank_2 PF12796.7 ORF125286 - 3.4e-08 34.0 0.1 0.0022 18.5 0.0 2.4 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF125286 - 2.9e-07 30.6 0.6 0.036 14.5 0.1 3.5 2 1 1 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF125286 - 1.1e-05 25.4 1.3 2.3 9.1 0.0 4.0 3 1 1 4 4 4 3 Ankyrin repeat Ank_5 PF13857.6 ORF125286 - 1.4e-05 25.3 1.9 0.43 11.0 0.0 3.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF125286 - 0.0062 17.1 0.5 0.63 10.7 0.0 3.2 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Thioredoxin_6 PF13848.6 ORF12489 - 9.2e-06 25.7 0.0 1.7e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like domain RicinB_lectin_2 PF14200.6 ORF123802 - 0.0046 17.6 0.2 0.14 12.9 0.1 2.5 2 1 2 4 4 4 3 Ricin-type beta-trefoil lectin domain-like PI3_PI4_kinase PF00454.27 ORF122612 - 1.7e-30 106.7 0.2 6.2e-27 95.0 0.0 2.3 2 0 0 2 2 2 2 Phosphatidylinositol 3- and 4-kinase Acetyltransf_1 PF00583.25 ORF121275 - 1.2e-15 57.8 0.2 1.7e-15 57.3 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF121275 - 8e-11 42.0 0.2 1.2e-10 41.4 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF121275 - 3.5e-09 36.9 0.1 5.9e-09 36.2 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF121275 - 0.0029 17.7 0.1 0.0045 17.1 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FKBP_C PF00254.28 ORF121013 - 4e-18 65.5 0.0 1.3e-17 63.9 0.0 1.8 2 0 0 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase EF-hand_1 PF00036.32 ORF119968 - 1.2e-25 87.0 18.6 3.9e-07 29.2 0.1 6.0 6 1 0 6 6 6 5 EF hand EF-hand_6 PF13405.6 ORF119968 - 2.1e-22 77.1 14.4 0.00011 21.9 0.1 5.7 5 1 0 5 5 5 5 EF-hand domain EF-hand_7 PF13499.6 ORF119968 - 2.8e-20 72.6 13.9 3.3e-09 37.1 0.9 3.4 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF119968 - 1.7e-13 49.4 15.6 0.00036 19.9 0.0 5.7 5 0 0 5 5 5 5 EF hand EF-hand_8 PF13833.6 ORF119968 - 3.2e-11 42.9 13.2 3.9e-06 26.6 0.2 5.2 4 1 1 5 5 5 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 ORF119968 - 0.00018 21.8 0.7 0.16 12.3 0.0 3.4 3 1 0 3 3 3 1 Secreted protein acidic and rich in cysteine Ca binding region Caleosin PF05042.13 ORF119968 - 0.0035 17.3 5.3 0.56 10.1 0.0 4.2 3 2 1 4 4 4 1 Caleosin related protein EF-hand_4 PF12763.7 ORF119968 - 0.02 14.8 2.1 0.18 11.7 0.1 2.7 2 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand SHOCT PF09851.9 ORF119968 - 0.4 10.5 2.3 80 3.2 0.0 4.1 5 0 0 5 5 5 0 Short C-terminal domain Dockerin_1 PF00404.18 ORF119968 - 0.45 10.7 0.0 0.45 10.7 0.0 2.8 4 0 0 4 4 4 0 Dockerin type I domain Methyltransf_11 PF08241.12 ORF118978 - 7.1e-14 52.2 0.0 1.2e-13 51.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF118978 - 6.5e-12 46.0 0.0 1.2e-11 45.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF118978 - 5.9e-11 42.4 0.0 1.2e-10 41.4 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF118978 - 4.2e-08 33.2 0.0 6.4e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF118978 - 4.9e-08 32.6 0.0 9.6e-08 31.6 0.0 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 ORF118978 - 3.5e-05 24.5 0.0 5.7e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DUF1799 PF08809.11 ORF118978 - 0.04 14.1 0.0 0.09 13.0 0.0 1.6 1 0 0 1 1 1 0 Phage related hypothetical protein (DUF1799) SUR7 PF06687.12 ORF117647 - 7.2 6.2 13.1 0.97 9.0 6.9 2.2 2 1 0 2 2 2 0 SUR7/PalI family Prok-RING_4 PF14447.6 ORF116529 - 7e-05 22.6 7.4 7e-05 22.6 7.4 3.6 3 2 0 3 3 3 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 ORF116529 - 9.9e-05 22.1 5.9 9.9e-05 22.1 5.9 4.7 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 ORF116529 - 0.016 15.0 5.3 0.016 15.0 5.3 3.6 4 0 0 4 4 4 0 RING/Ubox like zinc-binding domain Zn_Tnp_IS1595 PF12760.7 ORF116529 - 1.1 9.2 17.5 0.088 12.8 5.0 3.2 2 2 0 2 2 2 0 Transposase zinc-ribbon domain YEATS PF03366.16 ORF112436 - 2.4e-17 62.6 1.9 1.1e-16 60.5 0.4 2.3 2 0 0 2 2 2 1 YEATS family zf-C3HC4_2 PF13923.6 ORF112436 - 1.7e-08 34.1 9.7 3.4e-08 33.2 9.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF112436 - 2e-08 34.0 9.9 4.2e-08 32.9 9.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF112436 - 2.3e-08 34.0 9.0 4.8e-08 33.0 9.0 1.6 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 ORF112436 - 3.2e-08 33.8 8.1 6e-08 32.9 8.1 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF112436 - 3.2e-07 30.1 9.1 5.5e-07 29.4 9.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF112436 - 5.5e-07 29.5 6.3 1.6e-06 28.0 6.3 1.9 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF112436 - 8.4e-07 28.8 9.6 1.8e-06 27.8 9.6 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF112436 - 8.7e-06 25.7 2.7 1.9e-05 24.6 2.7 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 ORF112436 - 0.00023 20.9 5.3 0.00047 19.9 5.3 1.6 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Prok-RING_4 PF14447.6 ORF112436 - 0.00026 20.8 8.4 0.00055 19.7 7.8 1.8 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_10 PF16685.5 ORF112436 - 0.0063 16.6 7.2 0.029 14.5 6.6 2.2 2 0 0 2 2 2 1 zinc RING finger of MSL2 zf-RING_6 PF14835.6 ORF112436 - 0.0069 16.2 2.2 0.015 15.1 2.2 1.5 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-rbx1 PF12678.7 ORF112436 - 0.0098 16.2 8.3 0.048 14.0 8.3 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain Baculo_IE-1 PF05290.11 ORF112436 - 0.059 13.3 3.8 0.13 12.2 3.8 1.6 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) zf-RING_4 PF14570.6 ORF112436 - 0.087 12.6 5.2 0.22 11.4 5.2 1.8 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zinc_ribbon_4 PF13717.6 ORF112436 - 0.44 10.5 5.9 0.91 9.5 3.3 2.7 1 1 1 2 2 2 0 zinc-ribbon domain zf-C6H2 PF15801.5 ORF112436 - 4.5 7.7 7.6 13 6.1 2.7 2.7 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding FYVE PF01363.21 ORF112436 - 5.2 7.3 8.0 23 5.2 8.0 2.1 1 1 0 1 1 1 0 FYVE zinc finger zf-RING_11 PF17123.5 ORF112436 - 5.3 6.9 13.7 18 5.2 8.1 2.9 1 1 1 2 2 2 0 RING-like zinc finger SH3_4 PF06347.13 ORF112161 - 0.0023 17.7 0.9 0.0048 16.7 0.9 1.5 1 0 0 1 1 1 1 Bacterial SH3 domain DUF229 PF02995.17 ORF111752 - 2.1e-20 72.8 4.0 2.8e-20 72.4 4.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF111752 - 1.8e-09 37.5 0.6 2.1e-09 37.2 0.6 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF111752 - 0.017 14.7 0.0 0.017 14.7 0.0 1.3 1 0 0 1 1 1 0 Type I phosphodiesterase / nucleotide pyrophosphatase DUF1501 PF07394.12 ORF111752 - 0.1 11.6 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) ALGX PF16822.5 ORF111714 - 0.11 12.2 0.8 0.17 11.5 0.8 1.2 1 0 0 1 1 1 0 SGNH hydrolase-like domain, acetyltransferase AlgX # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks84.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks84.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks84.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks84.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:43 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- RapA_C PF12137.8 ORF109876 - 1.7e-105 353.0 0.6 1.9e-105 352.8 0.6 1.0 1 0 0 1 1 1 1 RNA polymerase recycling family C-terminal COG2 PF06148.11 ORF109876 - 0.043 13.9 1.3 0.064 13.3 1.3 1.2 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Helicase_C PF00271.31 ORF106765 - 6.8e-25 87.6 0.5 9.4e-25 87.1 0.5 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Fructosamin_kin PF03881.14 ORF106765 - 0.014 14.6 0.2 0.021 14.1 0.2 1.2 1 0 0 1 1 1 0 Fructosamine kinase DUF5132 PF17195.4 ORF106765 - 0.048 13.8 2.3 0.37 10.9 1.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF5132) Nucleolin_bd PF16725.5 ORF106765 - 0.096 12.4 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Nucleolin binding domain RINGv PF12906.7 ORF106734 - 2.7e-06 27.4 17.7 4.9e-05 23.4 13.7 2.9 2 1 0 2 2 2 2 RING-variant domain Spo7 PF03907.13 ORF106734 - 0.011 15.3 0.7 0.034 13.6 0.7 1.8 1 1 0 1 1 1 0 Spo7-like protein DHHC PF01529.20 ORF106734 - 0.77 9.9 11.0 0.3 11.2 0.7 2.6 2 1 0 2 2 2 0 DHHC palmitoyltransferase Bac_export_2 PF01312.19 ORF101874 - 6.6 5.8 7.8 13 4.9 7.8 1.5 1 1 0 1 1 1 0 FlhB HrpN YscU SpaS Family MSL2-CXC PF16682.5 ORF101099 - 3.2 7.9 9.3 11 6.2 4.4 2.7 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 Response_reg PF00072.24 NODE_29218_length_742_cov_4.026874_g23058_i0reverse_frame_1 - 8.7e-20 71.0 0.0 3.7e-19 69.0 0.0 1.8 2 0 0 2 2 2 1 Response regulator receiver domain CitT PF12431.8 NODE_29218_length_742_cov_4.026874_g23058_i0reverse_frame_1 - 2.3e-07 31.0 0.0 4e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator Med6 PF04934.14 NODE_29212_length_742_cov_52.480905_g23053_i0forward_frame_1 - 0.016 15.0 0.3 0.034 13.9 0.3 1.5 1 0 0 1 1 1 0 MED6 mediator sub complex component DUF908 PF06012.12 NODE_29122_length_744_cov_83.528914_g22977_i0reverse_frame_1 - 0.01 15.3 0.4 0.015 14.7 0.4 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) DUF5453 PF17534.2 NODE_29122_length_744_cov_83.528914_g22977_i0reverse_frame_1 - 0.095 12.6 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5453) Glycoprot_B_PH2 PF17417.2 NODE_29122_length_744_cov_83.528914_g22977_i0reverse_frame_1 - 0.13 12.6 0.9 0.33 11.3 0.1 1.9 2 0 0 2 2 2 0 Herpesvirus Glycoprotein B PH-like domain HPIP_like PF18524.1 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_1 - 0.0011 18.7 10.4 4.9 7.0 0.1 5.7 5 0 0 5 5 5 3 High potential iron-sulfur protein like DUF3795 PF12675.7 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_1 - 0.8 10.2 25.4 10 6.6 0.6 5.1 4 2 0 5 5 5 0 Protein of unknown function (DUF3795) PSII_Ycf12 PF05969.11 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_1 - 1.1 9.3 13.0 47 4.1 0.2 4.4 4 0 0 4 4 4 0 Photosystem II complex subunit Ycf12 TMEM213 PF15192.6 NODE_29078_length_745_cov_2.035211_g22938_i0forward_frame_3 - 0.041 13.9 0.1 0.087 12.8 0.1 1.5 1 0 0 1 1 1 0 TMEM213 family zf-B_box PF00643.24 NODE_29078_length_745_cov_2.035211_g22938_i0forward_frame_3 - 0.071 13.3 8.1 0.17 12.1 8.1 1.7 1 0 0 1 1 1 0 B-box zinc finger IBR PF01485.21 NODE_29078_length_745_cov_2.035211_g22938_i0forward_frame_3 - 0.3 11.4 7.3 1.1 9.6 7.3 1.9 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain TrkA_N PF02254.18 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 1.4e-30 106.0 0.1 1.8e-30 105.6 0.1 1.2 1 0 0 1 1 1 1 TrkA-N domain Methyltr_RsmB-F PF01189.17 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 4.3e-30 104.8 0.0 3e-29 102.1 0.0 1.9 2 0 0 2 2 2 1 16S rRNA methyltransferase RsmB/F F420_oxidored PF03807.17 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 3.7e-05 24.2 0.1 8.7e-05 23.0 0.1 1.7 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.00044 20.7 0.0 0.00076 19.9 0.0 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.00077 18.8 0.0 0.001 18.4 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Shikimate_DH PF01488.20 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.00078 19.5 0.0 0.001 19.1 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.00081 19.7 0.1 0.0013 19.0 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain UDPG_MGDP_dh_N PF03721.14 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.001 18.7 0.0 0.0019 17.8 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.0017 18.0 0.0 0.0026 17.4 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.0096 16.1 0.0 0.018 15.2 0.0 1.4 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.015 15.2 0.1 0.02 14.8 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.04 14.5 0.1 0.071 13.7 0.1 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_10 PF13460.6 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.054 13.4 0.3 0.075 12.9 0.3 1.2 1 0 0 1 1 1 0 NAD(P)H-binding XdhC_C PF13478.6 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.082 13.4 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 XdhC Rossmann domain DUF1188 PF06690.11 NODE_29074_length_745_cov_3.398592_g22934_i0forward_frame_3 - 0.083 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Peptidase_S68 PF10461.9 NODE_29048_length_745_cov_249.611268_g22914_i0reverse_frame_2 - 0.03 14.5 1.7 0.17 12.1 1.7 2.4 1 0 0 1 1 1 0 Peptidase S68 DUF2738 PF10927.8 NODE_29048_length_745_cov_249.611268_g22914_i0forward_frame_2 - 0.04 13.0 0.0 0.054 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2738) RecO_C PF02565.15 NODE_29015_length_746_cov_99.001406_g22888_i0reverse_frame_3 - 0.33 10.7 1.3 5.6 6.7 0.2 2.2 1 1 1 2 2 2 0 Recombination protein O C terminal RecO_C PF02565.15 NODE_29015_length_746_cov_99.001406_g22888_i0reverse_frame_2 - 0.31 10.8 1.1 5 6.9 0.1 2.1 1 1 0 2 2 2 0 Recombination protein O C terminal Polysacc_syn_2C PF08485.10 NODE_29015_length_746_cov_99.001406_g22888_i0forward_frame_3 - 0.13 11.9 0.1 0.13 11.9 0.1 2.9 3 0 0 3 3 3 0 Polysaccharide biosynthesis protein C-terminal zf-HYPF PF07503.12 NODE_29015_length_746_cov_99.001406_g22888_i0forward_frame_2 - 2.4 8.0 7.7 4.3 7.2 0.9 2.5 2 0 0 2 2 2 0 HypF finger DUF3902 PF13042.6 NODE_28988_length_747_cov_3.508427_g22866_i0reverse_frame_2 - 0.024 14.2 0.5 0.024 14.2 0.5 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3902) Sec1 PF00995.23 ORF9947 - 0.001 18.4 5.2 0.0017 17.7 5.2 1.3 1 0 0 1 1 1 1 Sec1 family DLP_helical PF18709.1 ORF9947 - 0.0028 16.9 8.2 0.0037 16.5 8.2 1.1 1 0 0 1 1 1 1 Dynamin-like helical domain DUF3552 PF12072.8 ORF9947 - 0.0092 15.4 13.5 0.0092 15.4 13.5 1.9 1 1 1 2 2 2 1 Domain of unknown function (DUF3552) AAA_13 PF13166.6 ORF9947 - 0.019 13.6 8.1 0.027 13.2 8.1 1.1 1 0 0 1 1 1 0 AAA domain FAM76 PF16046.5 ORF9947 - 0.054 12.9 11.3 0.044 13.1 10.1 1.4 1 1 0 1 1 1 0 FAM76 protein YtxH PF12732.7 ORF9947 - 0.25 11.9 0.3 0.25 11.9 0.3 2.0 2 0 0 2 2 2 0 YtxH-like protein Exonuc_VII_L PF02601.15 ORF9947 - 0.44 10.1 4.9 0.56 9.7 4.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit TMPIT PF07851.13 ORF9947 - 1.2 8.4 10.3 0.44 9.7 6.4 1.8 1 1 1 2 2 2 0 TMPIT-like protein Fzo_mitofusin PF04799.13 ORF9947 - 2 7.9 8.3 0.15 11.6 2.3 1.8 1 1 1 2 2 2 0 fzo-like conserved region DUF4407 PF14362.6 ORF9947 - 4.1 6.7 7.9 5.6 6.2 7.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Porin_3 PF01459.22 ORF9827 - 1.6e-10 40.9 0.1 2.5e-10 40.3 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic porin Endotoxin_C PF03944.14 ORF9827 - 0.19 12.1 0.0 0.33 11.3 0.0 1.4 1 0 0 1 1 1 0 delta endotoxin APG6_N PF17675.1 ORF95895 - 0.0086 16.6 8.7 0.0086 16.6 8.7 3.1 2 1 1 3 3 3 1 Apg6 coiled-coil region Csm1_N PF18504.1 ORF95895 - 0.024 15.0 1.3 0.024 15.0 1.3 4.9 1 1 4 5 5 5 0 Csm1 N-terminal domain UPF0242 PF06785.11 ORF95895 - 0.22 11.6 29.4 0.53 10.4 1.8 2.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus bZIP_1 PF00170.21 ORF95895 - 0.26 11.4 26.9 5.7 7.1 2.9 4.5 3 1 1 4 4 4 0 bZIP transcription factor FlaC_arch PF05377.11 ORF95895 - 0.6 10.6 22.4 0.63 10.5 1.9 4.7 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) FlxA PF14282.6 ORF95895 - 1.6 8.8 20.5 0.54 10.3 3.4 3.8 2 2 1 3 3 3 0 FlxA-like protein DUF4407 PF14362.6 ORF95895 - 1.6 8.0 13.8 6.9 5.9 13.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4790 PF16037.5 ORF95895 - 1.8 9.1 7.4 0.26 11.8 1.8 2.5 2 2 2 4 4 4 0 Domain of unknown function (DUF4790) DUF1664 PF07889.12 ORF95895 - 7.6 6.6 20.1 5.3 7.1 5.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Myb_DNA-bind_6 PF13921.6 ORF91822 - 0.11 12.7 3.2 0.43 10.9 3.1 2.1 1 1 0 1 1 1 0 Myb-like DNA-binding domain adh_short PF00106.25 ORF90389 - 8.7e-54 181.9 0.0 1e-53 181.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF90389 - 9.6e-37 126.8 0.0 1.2e-36 126.5 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 ORF90389 - 2.2e-12 47.3 0.0 3.1e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF90389 - 4.1e-06 26.5 0.1 1.2e-05 24.9 0.1 2.0 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 ORF90389 - 8.5e-06 25.8 0.0 9.7e-06 25.6 0.0 1.3 1 1 0 1 1 1 1 NAD(P)H-binding F420_oxidored PF03807.17 ORF90389 - 0.00042 20.8 0.0 0.00095 19.7 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Polysacc_synt_2 PF02719.15 ORF90389 - 0.0009 18.5 0.0 0.0023 17.1 0.0 1.6 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein Sacchrp_dh_NADP PF03435.18 ORF90389 - 0.0036 17.6 0.0 0.0053 17.0 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain GDP_Man_Dehyd PF16363.5 ORF90389 - 0.018 14.5 0.0 0.043 13.2 0.0 1.8 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 ORF90389 - 0.025 13.7 0.0 0.042 12.9 0.0 1.4 1 0 0 1 1 1 0 RmlD substrate binding domain NmrA PF05368.13 ORF90389 - 0.03 13.9 0.0 0.042 13.4 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family Glyco_hydro_101 PF12905.7 ORF90389 - 0.064 12.7 0.0 0.12 11.8 0.0 1.4 2 0 0 2 2 2 0 Endo-alpha-N-acetylgalactosaminidase ParBc_2 PF08857.11 ORF8467 - 2.4e-18 66.8 0.1 3.5e-18 66.2 0.1 1.2 1 0 0 1 1 1 1 Putative ParB-like nuclease MIP PF00230.20 ORF83446 - 1.4e-24 87.1 12.0 1.7e-24 86.8 12.0 1.1 1 0 0 1 1 1 1 Major intrinsic protein GBP PF02263.19 ORF82869 - 3.5e-47 160.8 0.2 4e-47 160.7 0.2 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain Septin PF00735.18 ORF82869 - 0.027 13.8 0.0 0.038 13.3 0.0 1.4 1 0 0 1 1 1 0 Septin MMR_HSR1 PF01926.23 ORF82869 - 0.032 14.3 0.1 0.083 13.0 0.1 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase CRIM PF16978.5 ORF81868 - 0.021 15.0 0.1 0.041 14.0 0.1 1.6 1 1 0 1 1 1 0 SAPK-interacting protein 1 (Sin1), middle CRIM domain RsfS PF02410.15 ORF81739 - 8.9e-06 26.1 0.0 1.5e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation RICTOR_M PF14666.6 ORF81739 - 0.091 12.5 1.8 0.51 10.1 0.1 2.7 3 0 0 3 3 3 0 Rapamycin-insensitive companion of mTOR, middle domain CxC2 PF18803.1 ORF81036 - 0.24 11.6 1.3 0.35 11.1 0.1 1.9 3 0 0 3 3 3 0 CxC2 like cysteine cluster associated with KDZ transposases T4SS-DNA_transf PF02534.14 ORF78933 - 0.034 13.0 1.0 0.051 12.4 1.0 1.2 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer Presenilin PF01080.17 ORF78933 - 6.5 5.4 5.1 11 4.7 5.1 1.3 1 0 0 1 1 1 0 Presenilin Actin PF00022.19 ORF77833 - 1.2e-70 238.2 0.0 6e-70 235.9 0.0 1.8 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 ORF77833 - 0.0027 16.6 0.0 0.0049 15.7 0.0 1.3 1 1 0 1 1 1 1 MreB/Mbl protein zf-C2HC5 PF06221.13 ORF73041 - 0.17 11.9 3.1 0.3 11.1 0.9 2.4 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type DUF2987 PF11205.8 ORF71868 - 0.28 11.1 1.7 30 4.5 0.0 3.4 2 1 0 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF71868 - 1 9.8 13.1 2.7 8.4 0.3 3.9 4 0 0 4 4 4 0 Phage protein Gp68 Mito_carr PF00153.27 ORF67397 - 1.2e-36 124.6 3.1 1.1e-21 76.6 0.0 2.6 3 0 0 3 3 3 2 Mitochondrial carrier protein Wzz PF02706.15 ORF67397 - 0.031 14.6 0.0 0.059 13.7 0.0 1.5 1 0 0 1 1 1 0 Chain length determinant protein PKcGMP_CC PF16808.5 ORF6392 - 0.0023 17.8 4.2 0.0023 17.8 4.2 3.5 4 0 0 4 4 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase Ribosomal_L29 PF00831.23 ORF6392 - 0.46 10.5 9.2 0.97 9.5 5.4 3.1 3 1 0 3 3 3 0 Ribosomal L29 protein CC2-LZ PF16516.5 ORF6392 - 2.4 8.6 21.3 0.11 12.9 5.3 2.7 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Fzo_mitofusin PF04799.13 ORF6392 - 3.2 7.3 9.8 1.4 8.4 5.7 2.2 1 1 1 2 2 2 0 fzo-like conserved region ICA69 PF04629.14 ORF6392 - 3.6 7.8 14.6 4.9 7.4 14.6 1.2 1 0 0 1 1 1 0 Islet cell autoantigen ICA69, C-terminal domain DUF489 PF04356.12 ORF6392 - 7.5 6.5 7.3 18 5.3 7.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF489) CCDC50_N PF15295.6 ORF59414 - 0.065 13.4 1.6 0.11 12.6 0.3 2.1 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 50 N-terminus DnaJ PF00226.31 ORF5909 - 6.8e-18 64.6 1.4 1.4e-17 63.6 1.4 1.5 1 0 0 1 1 1 1 DnaJ domain UvrD_C PF13361.6 ORF56698 - 3.5e-34 118.7 0.0 4.5e-34 118.4 0.0 1.1 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C_2 PF13538.6 ORF56698 - 2.4e-11 43.3 0.1 1.7e-10 40.5 0.0 2.5 2 1 0 2 2 2 1 UvrD-like helicase C-terminal domain Exonuc_V_gamma PF04257.14 ORF56698 - 0.0013 17.1 0.0 0.0016 16.8 0.0 1.1 1 0 0 1 1 1 1 Exodeoxyribonuclease V, gamma subunit Viral_helicase1 PF01443.18 ORF56698 - 0.011 15.5 0.0 0.019 14.7 0.0 1.4 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase UPF0270 PF06794.12 ORF56698 - 0.11 12.6 0.2 0.24 11.5 0.2 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) PAC3 PF10178.9 ORF552 - 3.3e-05 23.9 0.0 6e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 Proteasome assembly chaperone 3 POC3_POC4 PF10448.9 ORF552 - 0.012 15.6 0.7 0.02 14.9 0.7 1.4 1 1 0 1 1 1 0 20S proteasome chaperone assembly proteins 3 and 4 Ank_4 PF13637.6 ORF49094 - 1.3e-29 102.2 7.7 3.1e-08 34.0 0.4 4.6 3 2 3 6 6 6 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF49094 - 1e-21 77.3 0.3 3.2e-11 43.7 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF49094 - 5.2e-19 66.3 0.1 0.026 15.1 0.0 6.2 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF49094 - 9.4e-13 48.1 2.6 1.4e-05 25.3 0.3 4.7 2 1 4 6 6 6 4 Ankyrin repeats (many copies) Ank PF00023.30 ORF49094 - 1.9e-12 47.0 8.9 0.02 15.3 0.4 6.2 6 0 0 6 6 6 4 Ankyrin repeat Tim17 PF02466.19 ORF46966 - 1e-07 32.3 1.2 1.5e-07 31.8 1.2 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family TGF_beta_GS PF08515.12 ORF46657 - 0.031 13.8 0.7 0.079 12.5 0.7 1.7 1 0 0 1 1 1 0 Transforming growth factor beta type I GS-motif YjcZ PF13990.6 ORF46149 - 5.5e-124 413.0 4.6 6.1e-124 412.8 4.6 1.0 1 0 0 1 1 1 1 YjcZ-like protein DUF2987 PF11205.8 ORF441 - 0.28 11.1 1.7 30 4.5 0.0 3.4 2 1 0 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF441 - 1 9.8 13.1 2.7 8.4 0.3 3.9 4 0 0 4 4 4 0 Phage protein Gp68 MORN PF02493.20 ORF43095 - 1.2e-42 141.3 69.4 3.5e-08 32.9 2.2 10.5 10 1 0 10 10 10 10 MORN repeat Tudor_2 PF18104.1 ORF43095 - 0.21 11.3 17.2 5.2 6.8 0.6 5.3 6 0 0 6 6 6 0 Jumonji domain-containing protein 2A Tudor domain DUF1923 PF09083.10 ORF43095 - 5.4 6.8 8.4 2.7 7.7 0.5 3.8 3 1 1 4 4 4 0 Domain of unknown function (DUF1923) M20_dimer PF07687.14 ORF42529 - 2.2e-11 43.6 0.1 4.2e-11 42.7 0.0 1.5 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 ORF42529 - 1.1e-06 28.5 0.0 1.4e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Mistic PF11458.8 ORF42529 - 0.026 14.5 0.3 0.086 12.8 0.0 1.9 2 0 0 2 2 2 0 Membrane-integrating protein Mistic Peptidase_C9 PF01707.16 ORF42529 - 0.1 12.2 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 Peptidase family C9 HlyIII PF03006.20 ORF39460 - 9.9e-46 156.2 21.5 1.2e-45 155.9 21.5 1.0 1 0 0 1 1 1 1 Haemolysin-III related PIRT PF15099.6 ORF39460 - 0.076 12.6 0.0 0.2 11.3 0.0 1.6 1 0 0 1 1 1 0 Phosphoinositide-interacting protein family ECH_1 PF00378.20 ORF34806 - 1.9e-22 79.8 0.1 2.3e-22 79.5 0.1 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF34806 - 4.2e-08 33.1 0.0 5.3e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase PMM PF03332.13 ORF28103 - 1.3e-91 306.3 1.7 1.7e-91 305.9 1.7 1.0 1 0 0 1 1 1 1 Eukaryotic phosphomannomutase Hydrolase_3 PF08282.12 ORF28103 - 2.7e-09 37.1 0.0 5.1e-08 33.0 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 ORF28103 - 0.013 15.0 0.0 0.21 11.1 0.0 2.0 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.7 ORF28103 - 0.054 13.9 0.4 0.94 9.8 0.2 2.7 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 ORF28103 - 0.1 12.7 0.0 0.31 11.2 0.0 1.8 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF28103 - 0.17 12.1 0.6 9.3 6.5 0.1 2.4 2 1 1 3 3 3 0 haloacid dehalogenase-like hydrolase DAGAT PF03982.13 ORF24042 - 3.3e-30 105.0 0.0 3.9e-30 104.8 0.0 1.0 1 0 0 1 1 1 1 Diacylglycerol acyltransferase Ank_2 PF12796.7 ORF23427 - 2.2e-42 143.5 1.0 1.3e-15 57.7 0.0 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF23427 - 3.9e-31 107.0 5.2 3.5e-09 37.0 0.2 4.8 3 1 2 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF23427 - 5.2e-31 105.7 8.6 2.5e-05 24.5 0.0 7.1 7 0 0 7 7 7 7 Ankyrin repeat Ank_5 PF13857.6 ORF23427 - 2.8e-29 100.8 6.4 4e-09 36.6 0.2 6.5 2 1 5 7 7 7 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF23427 - 5.6e-29 97.0 1.6 0.0007 19.9 0.0 7.2 7 0 0 7 7 7 7 Ankyrin repeat YlzJ PF14035.6 ORF23427 - 0.023 14.9 0.0 22 5.3 0.0 4.3 5 1 0 5 5 5 0 YlzJ-like protein Lebercilin PF15619.6 ORF22889 - 0.00062 19.5 5.6 0.00095 18.9 5.6 1.2 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF4854 PF16146.5 ORF22889 - 0.0019 18.5 4.0 0.0048 17.2 4.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4854) DASH_Dam1 PF08653.10 ORF22889 - 0.0098 15.7 3.0 2.6 7.9 0.1 2.6 2 0 0 2 2 2 2 DASH complex subunit Dam1 Matrilin_ccoil PF10393.9 ORF22889 - 0.19 11.6 0.2 0.19 11.6 0.2 2.7 3 0 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin CCDC-167 PF15188.6 ORF22889 - 0.57 10.6 4.3 3.5 8.0 4.3 2.1 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 V-SNARE PF05008.15 ORF22889 - 0.89 10.0 6.7 1.1 9.7 5.1 1.9 1 1 1 2 2 2 0 Vesicle transport v-SNARE protein N-terminus GrpE PF01025.19 ORF22889 - 2.4 7.8 7.9 1.8 8.2 4.2 2.0 1 1 0 2 2 2 0 GrpE FlaC_arch PF05377.11 ORF22889 - 2.4 8.6 5.4 3.2 8.2 2.0 2.4 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) zf-RING_2 PF13639.6 ORF20151 - 1.6e-09 37.9 8.2 4.6e-09 36.5 8.2 1.8 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF20151 - 6.5e-09 35.7 3.0 6.5e-09 35.7 3.0 2.5 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF20151 - 4.7e-08 32.8 9.7 9.9e-08 31.7 9.7 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF20151 - 1.5e-07 31.2 12.3 2.1e-07 30.7 10.9 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF20151 - 3.7e-06 26.8 9.1 9.6e-06 25.5 9.1 1.8 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 ORF20151 - 4e-06 26.6 8.6 1.1e-05 25.1 8.6 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF20151 - 5.6e-06 26.4 9.3 5.6e-06 26.4 9.3 1.9 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF20151 - 5.8e-05 22.9 9.5 5.8e-05 22.9 9.5 1.8 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 ORF20151 - 0.00011 22.4 4.2 0.00038 20.7 4.2 1.9 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-Nse PF11789.8 ORF20151 - 0.00028 20.6 5.4 0.00087 19.1 5.4 1.9 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-ANAPC11 PF12861.7 ORF20151 - 0.0033 17.5 5.0 0.011 15.8 5.0 1.9 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_10 PF16685.5 ORF20151 - 0.028 14.6 8.9 0.077 13.1 8.5 1.9 1 1 0 1 1 1 0 zinc RING finger of MSL2 zf-C2HC5 PF06221.13 ORF20011 - 0.17 11.9 3.1 0.3 11.1 0.9 2.4 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type CTP_transf_3 PF02348.19 ORF150394 - 9.9e-74 248.0 0.0 1.2e-73 247.8 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase NTP_transf_3 PF12804.7 ORF150394 - 3.7e-14 53.4 0.1 4.4e-14 53.1 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.9 ORF150394 - 0.0013 18.6 0.7 0.0022 17.8 0.7 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2064) NTP_transferase PF00483.23 ORF150394 - 0.019 14.5 0.0 0.026 14.1 0.0 1.3 1 0 0 1 1 1 0 Nucleotidyl transferase DUF2067 PF09840.9 ORF150394 - 0.16 11.5 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) AP4E_app_platf PF14807.6 ORF150268 - 4.9e-19 68.5 0.0 6.5e-19 68.2 0.0 1.2 1 0 0 1 1 1 1 Adaptin AP4 complex epsilon appendage platform AP3B1_C PF14796.6 ORF150268 - 0.028 14.7 6.8 0.19 12.0 1.3 2.3 1 1 1 2 2 2 0 Clathrin-adaptor complex-3 beta-1 subunit C-terminal DUF2987 PF11205.8 ORF145411 - 0.28 11.1 1.7 30 4.5 0.0 3.4 2 1 0 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF145411 - 1 9.8 13.1 2.7 8.4 0.3 3.9 4 0 0 4 4 4 0 Phage protein Gp68 MTS PF05175.14 ORF145285 - 4.7e-18 65.3 0.1 1.9e-16 60.1 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_31 PF13847.6 ORF145285 - 1.6e-13 50.7 0.0 2.1e-13 50.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF145285 - 2.9e-10 40.7 0.0 6.7e-10 39.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 ORF145285 - 2.5e-08 33.7 0.0 3.6e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 ORF145285 - 1.8e-06 27.7 0.0 2.6e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 ORF145285 - 1.2e-05 25.1 0.0 1.9e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_12 PF08242.12 ORF145285 - 2e-05 25.3 0.0 0.00021 22.0 0.0 2.4 3 0 0 3 3 3 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF145285 - 3e-05 23.5 0.0 4.5e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Cons_hypoth95 PF03602.15 ORF145285 - 4.5e-05 23.2 0.0 7.1e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 ORF145285 - 6.7e-05 22.9 0.0 0.00012 22.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 ORF145285 - 8.9e-05 22.3 1.0 0.0004 20.1 1.0 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_23 PF13489.6 ORF145285 - 0.00011 22.1 0.0 0.00046 20.1 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF145285 - 0.0012 18.3 0.0 0.0037 16.8 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_11 PF08241.12 ORF145285 - 0.0016 19.0 0.0 0.0042 17.7 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 ORF145285 - 0.0057 16.0 0.0 0.0086 15.4 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain N6_Mtase PF02384.16 ORF145285 - 0.008 15.5 0.0 0.013 14.8 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_16 PF10294.9 ORF145285 - 0.019 14.7 0.0 0.033 13.9 0.0 1.4 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_10 PF05971.12 ORF145285 - 0.021 14.2 0.0 0.027 13.8 0.0 1.1 1 0 0 1 1 1 0 RNA methyltransferase Methyltransf_24 PF13578.6 ORF145285 - 0.049 14.6 0.0 0.64 11.1 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase domain DUF938 PF06080.12 ORF145285 - 0.055 13.2 0.0 0.085 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) N6_N4_Mtase PF01555.18 ORF145285 - 0.055 13.2 0.0 0.28 10.9 0.0 1.9 2 0 0 2 2 2 0 DNA methylase Rsm22 PF09243.10 ORF145285 - 0.13 11.5 0.0 0.21 10.8 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 AviRa PF11599.8 ORF145285 - 0.13 11.7 0.1 0.31 10.5 0.1 1.6 1 1 1 2 2 2 0 RRNA methyltransferase AviRa Methyltr_RsmB-F PF01189.17 ORF145285 - 0.21 11.2 0.0 0.42 10.2 0.0 1.4 2 0 0 2 2 1 0 16S rRNA methyltransferase RsmB/F WD40 PF00400.32 ORF145212 - 0.00052 20.8 0.8 7.6 7.6 0.0 3.9 4 0 0 4 4 4 2 WD domain, G-beta repeat RAP1 PF07218.11 ORF145212 - 0.005 15.2 0.4 0.0062 14.9 0.4 1.0 1 0 0 1 1 1 1 Rhoptry-associated protein 1 (RAP-1) Asp PF00026.23 ORF141690 - 2e-15 57.1 0.2 2.4e-15 56.8 0.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF141690 - 0.0024 17.6 0.0 0.0049 16.7 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Hanta_G2 PF01561.16 ORF141690 - 0.026 13.2 0.0 0.036 12.7 0.0 1.3 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 Tweety PF04906.13 ORF141690 - 0.17 10.5 0.5 0.25 9.9 0.5 1.1 1 0 0 1 1 1 0 Tweety TMEM154 PF15102.6 ORF141690 - 0.2 11.6 0.0 0.3 11.0 0.0 1.2 1 0 0 1 1 1 0 TMEM154 protein family Rhomboid PF01694.22 ORF134060 - 1.5e-31 109.5 18.3 1.5e-31 109.5 18.3 2.2 2 0 0 2 2 2 1 Rhomboid family Colicin_V PF02674.16 ORF127708 - 0.14 12.1 0.0 0.2 11.6 0.0 1.2 1 0 0 1 1 1 0 Colicin V production protein MatC_N PF07158.11 ORF127708 - 1.7 8.7 4.1 61 3.6 0.2 3.3 1 1 2 3 3 3 0 Dicarboxylate carrier protein MatC N-terminus BTHB PF18410.1 ORF125298 - 0.18 11.6 0.0 0.27 11.1 0.0 1.2 1 0 0 1 1 1 0 Basic tilted helix bundle domain SH3_9 PF14604.6 ORF12474 - 1.7e-08 34.2 0.1 2.9e-08 33.4 0.1 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF12474 - 1.2e-07 31.3 0.8 2e-07 30.5 0.8 1.4 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 ORF12474 - 3.5e-05 23.4 0.4 7.5e-05 22.3 0.1 1.7 2 0 0 2 2 2 1 Variant SH3 domain Mito_carr PF00153.27 ORF124695 - 1e-49 166.4 0.6 2.2e-20 72.4 0.1 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF4815 PF16075.5 ORF124695 - 0.1 10.9 0.0 0.14 10.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4815) DNA_pol_A_exo1 PF01612.20 ORF120917 - 3.2e-07 30.2 0.0 1.2e-06 28.3 0.0 1.8 1 1 0 1 1 1 1 3'-5' exonuclease ArsP_1 PF03773.13 ORF120120 - 0.096 11.8 0.2 0.35 10.0 0.0 1.8 2 0 0 2 2 2 0 Predicted permease MMU163 PF17119.5 ORF117749 - 0.026 13.7 3.6 0.023 13.8 2.6 1.4 1 1 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis ArsP_1 PF03773.13 ORF117392 - 0.096 11.8 0.2 0.35 10.0 0.0 1.8 2 0 0 2 2 2 0 Predicted permease DUF2987 PF11205.8 ORF116860 - 0.28 11.1 1.7 30 4.5 0.0 3.4 2 1 0 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF116860 - 1 9.8 13.1 2.7 8.4 0.3 3.9 4 0 0 4 4 4 0 Phage protein Gp68 WW PF00397.26 ORF116689 - 1.1e-13 50.9 2.2 1.3e-10 41.2 0.0 2.4 2 0 0 2 2 2 2 WW domain ECH_1 PF00378.20 ORF11519 - 5.4e-34 117.6 0.0 2.2e-33 115.6 0.0 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF11519 - 1.8e-15 57.3 0.1 6.1e-14 52.2 0.0 2.1 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase RRM_1 PF00076.22 ORF114342 - 1.3e-12 47.4 0.1 1.9e-12 46.8 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF114342 - 1e-11 44.3 16.2 1.1e-05 25.3 5.3 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF114342 - 3.1e-05 23.6 17.4 0.0068 16.1 5.7 2.4 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF114342 - 0.0025 17.8 15.0 0.025 14.5 7.9 2.4 1 1 1 2 2 2 2 Zinc knuckle Limkain-b1 PF11608.8 ORF114342 - 0.0025 17.9 0.0 0.0053 16.8 0.0 1.5 1 0 0 1 1 1 1 Limkain b1 RRM_3 PF08777.11 ORF114342 - 0.0072 16.3 0.3 0.016 15.3 0.3 1.5 1 0 0 1 1 1 1 RNA binding motif ProRS-C_1 PF09180.11 ORF114342 - 0.011 15.9 1.1 0.015 15.5 0.1 1.6 2 0 0 2 2 2 0 Prolyl-tRNA synthetase, C-terminal zf-CCHC_4 PF14392.6 ORF114342 - 0.015 15.0 8.0 0.34 10.7 1.3 2.5 2 0 0 2 2 2 0 Zinc knuckle Nup35_RRM_2 PF14605.6 ORF114342 - 0.019 15.0 0.1 0.031 14.3 0.1 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 ORF114342 - 0.022 14.9 0.0 0.038 14.1 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif RNA_bind PF08675.11 ORF114342 - 0.046 13.7 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 RNA binding domain DbpA PF03880.15 ORF114342 - 0.065 13.2 0.4 0.11 12.5 0.4 1.4 1 0 0 1 1 1 0 DbpA RNA binding domain zf-CCHC_2 PF13696.6 ORF114342 - 2.7 7.9 18.2 5.8 6.8 4.9 2.4 2 0 0 2 2 2 0 Zinc knuckle DUF2987 PF11205.8 ORF113768 - 0.28 11.1 1.7 30 4.5 0.0 3.4 2 1 0 3 3 3 0 Protein of unknown function (DUF2987) GP68 PF17469.2 ORF113768 - 1 9.8 13.1 2.7 8.4 0.3 3.9 4 0 0 4 4 4 0 Phage protein Gp68 CPBP PF02517.16 ORF112991 - 3.7e-09 36.8 10.1 9.2e-09 35.6 8.7 2.3 1 1 1 2 2 2 1 CPBP intramembrane metalloprotease DM4_12 PF07841.13 ORF11228 - 0.15 12.7 0.1 0.35 11.6 0.1 1.6 1 0 0 1 1 1 0 DM4/DM12 family YceG PF02618.16 ORF109466 - 6.7e-68 229.2 0.0 7.5e-68 229.1 0.0 1.0 1 0 0 1 1 1 1 YceG-like family RRM_1 PF00076.22 ORF108117 - 1.3e-12 47.4 0.1 1.9e-12 46.8 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCHC PF00098.23 ORF108117 - 1e-11 44.3 16.2 1.1e-05 25.3 5.3 2.6 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_5 PF14787.6 ORF108117 - 3.1e-05 23.6 17.4 0.0068 16.1 5.7 2.4 2 0 0 2 2 2 2 GAG-polyprotein viral zinc-finger zf-CCHC_3 PF13917.6 ORF108117 - 0.0025 17.8 15.0 0.025 14.5 7.9 2.4 1 1 1 2 2 2 2 Zinc knuckle Limkain-b1 PF11608.8 ORF108117 - 0.0025 17.9 0.0 0.0053 16.8 0.0 1.5 1 0 0 1 1 1 1 Limkain b1 RRM_3 PF08777.11 ORF108117 - 0.0072 16.3 0.3 0.016 15.3 0.3 1.5 1 0 0 1 1 1 1 RNA binding motif ProRS-C_1 PF09180.11 ORF108117 - 0.011 15.9 1.1 0.015 15.5 0.1 1.6 2 0 0 2 2 2 0 Prolyl-tRNA synthetase, C-terminal zf-CCHC_4 PF14392.6 ORF108117 - 0.015 15.0 8.0 0.34 10.7 1.3 2.5 2 0 0 2 2 2 0 Zinc knuckle Nup35_RRM_2 PF14605.6 ORF108117 - 0.019 15.0 0.1 0.031 14.3 0.1 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 ORF108117 - 0.022 14.9 0.0 0.038 14.1 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif RNA_bind PF08675.11 ORF108117 - 0.046 13.7 0.0 0.067 13.2 0.0 1.2 1 0 0 1 1 1 0 RNA binding domain DbpA PF03880.15 ORF108117 - 0.065 13.2 0.4 0.11 12.5 0.4 1.4 1 0 0 1 1 1 0 DbpA RNA binding domain zf-CCHC_2 PF13696.6 ORF108117 - 2.7 7.9 18.2 5.8 6.8 4.9 2.4 2 0 0 2 2 2 0 Zinc knuckle APG6_N PF17675.1 ORF107528 - 0.0086 16.6 8.7 0.0086 16.6 8.7 3.1 2 1 1 3 3 3 1 Apg6 coiled-coil region Csm1_N PF18504.1 ORF107528 - 0.024 15.0 1.3 0.024 15.0 1.3 4.9 1 1 4 5 5 5 0 Csm1 N-terminal domain UPF0242 PF06785.11 ORF107528 - 0.22 11.6 29.4 0.53 10.4 1.8 2.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus bZIP_1 PF00170.21 ORF107528 - 0.26 11.4 26.9 5.7 7.1 2.9 4.5 3 1 1 4 4 4 0 bZIP transcription factor FlaC_arch PF05377.11 ORF107528 - 0.6 10.6 22.4 0.63 10.5 1.9 4.7 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) FlxA PF14282.6 ORF107528 - 1.6 8.8 20.5 0.54 10.3 3.4 3.8 2 2 1 3 3 3 0 FlxA-like protein DUF4407 PF14362.6 ORF107528 - 1.6 8.0 13.8 6.9 5.9 13.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4790 PF16037.5 ORF107528 - 1.8 9.1 7.4 0.26 11.8 1.8 2.5 2 2 2 4 4 4 0 Domain of unknown function (DUF4790) DUF1664 PF07889.12 ORF107528 - 7.6 6.6 20.1 5.3 7.1 5.4 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Glyco_transf_7C PF02709.14 ORF104811 - 3.6e-07 29.7 0.1 6.2e-07 29.0 0.1 1.4 1 0 0 1 1 1 1 N-terminal domain of galactosyltransferase Glyco_tranf_2_3 PF13641.6 ORF104811 - 0.056 13.3 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 Ank_2 PF12796.7 ORF104120 - 5.2e-38 129.5 1.3 1.9e-16 60.4 0.2 3.8 1 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF104120 - 5.6e-30 103.3 4.2 6.2e-08 33.0 0.1 6.1 2 2 5 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF104120 - 7.7e-29 96.5 3.6 0.0024 18.2 0.0 8.0 8 0 0 8 8 8 6 Ankyrin repeat Ank PF00023.30 ORF104120 - 7.2e-25 86.3 10.9 0.0023 18.3 0.0 7.8 8 0 0 8 8 8 7 Ankyrin repeat Ank_5 PF13857.6 ORF104120 - 1.8e-21 75.9 11.7 0.0013 19.0 0.1 6.9 2 2 5 7 7 7 7 Ankyrin repeats (many copies) EzrA PF06160.12 ORF102895 - 0.00039 18.7 8.7 0.00039 18.7 8.7 1.7 2 0 0 2 2 2 1 Septation ring formation regulator, EzrA Sec34 PF04136.15 ORF102895 - 0.0041 17.0 5.2 0.0041 17.0 5.2 2.4 1 1 2 3 3 3 1 Sec34-like family DUF3810 PF12725.7 ORF102895 - 0.023 14.1 1.2 0.035 13.5 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3810) zf-RING_9 PF13901.6 ORF102895 - 0.032 14.2 4.4 0.072 13.1 0.7 2.1 1 1 0 2 2 2 0 Putative zinc-RING and/or ribbon BORCS7 PF16088.5 ORF102895 - 0.081 13.2 4.5 0.057 13.7 1.6 2.1 2 0 0 2 2 2 0 BLOC-1-related complex sub-unit 7 EMP24_GP25L PF01105.24 ORF102895 - 0.16 11.9 6.3 0.21 11.5 5.8 1.5 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD ThrE PF06738.12 ORF102895 - 0.28 10.5 0.2 0.42 10.0 0.2 1.2 1 0 0 1 1 1 0 Putative threonine/serine exporter Prefoldin_2 PF01920.20 ORF102895 - 0.37 10.8 9.9 3.9 7.5 3.8 3.0 2 1 1 3 3 3 0 Prefoldin subunit DHR10 PF18595.1 ORF102895 - 0.39 10.8 7.1 0.15 12.2 3.9 1.9 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain FapA PF03961.13 ORF102895 - 0.45 9.1 2.5 0.59 8.7 2.5 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A OmpH PF03938.14 ORF102895 - 4.4 7.7 11.2 21 5.5 11.2 2.1 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) RNA_Me_trans PF04252.13 ORF101509 - 8.1e-45 152.9 0.0 1.7e-44 151.8 0.0 1.5 1 1 0 1 1 1 1 Predicted SAM-dependent RNA methyltransferase He_PIG PF05345.12 ORF101340 - 0.00013 22.1 0.6 0.00029 21.0 0.6 1.6 1 0 0 1 1 1 1 Putative Ig domain HisKA_3 PF07730.13 ORF100758 - 0.076 13.5 0.2 0.45 11.1 0.0 2.3 2 1 1 3 3 3 0 Histidine kinase ArfGap PF01412.18 NODE_29368_length_739_cov_73.397727_g23185_i0forward_frame_1 - 2.1e-31 108.4 0.0 2.7e-31 108.1 0.0 1.1 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf Myco_arth_vir_N PF09610.10 NODE_29339_length_739_cov_501.339489_g23157_i0reverse_frame_1 - 0.11 12.6 0.8 0.11 12.6 0.8 2.2 2 0 0 2 2 2 0 Mycoplasma virulence signal region (Myco_arth_vir_N) WW_FCH_linker PF16623.5 NODE_29339_length_739_cov_501.339489_g23157_i0reverse_frame_1 - 0.21 12.3 2.2 0.29 11.9 0.8 2.0 1 1 1 2 2 2 0 Unstructured linker region between on GAS7 protein RRM_1 PF00076.22 NODE_29311_length_740_cov_78.296454_g23138_i0reverse_frame_1 - 3.7e-13 49.1 0.1 8.7e-13 47.9 0.1 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TSKS PF15358.6 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.00011 20.7 11.0 0.00016 20.3 11.0 1.3 1 0 0 1 1 1 1 Testis-specific serine kinase substrate Filament PF00038.21 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.001 18.7 30.2 0.0093 15.6 12.6 3.0 1 1 1 2 2 2 1 Intermediate filament protein HMMR_N PF15905.5 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.0018 17.8 23.3 0.0018 17.8 23.3 2.7 1 1 1 2 2 2 1 Hyaluronan mediated motility receptor N-terminal DUF641 PF04859.12 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.0021 18.4 33.3 0.053 13.9 0.7 5.0 1 1 3 5 5 5 3 Plant protein of unknown function (DUF641) DUF3584 PF12128.8 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.0034 15.0 37.5 0.0029 15.2 26.6 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3584) TMF_DNA_bd PF12329.8 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.0064 16.5 13.0 0.0064 16.5 13.0 6.1 1 1 3 5 5 5 1 TATA element modulatory factor 1 DNA binding PKcGMP_CC PF16808.5 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.022 14.6 0.6 0.022 14.6 0.6 5.0 3 1 2 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Cnd1 PF12717.7 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.023 14.7 3.0 0.023 14.7 3.0 2.8 1 1 2 3 3 3 0 non-SMC mitotic condensation complex subunit 1 Spc7 PF08317.11 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.026 13.4 40.0 0.066 12.1 9.0 3.2 1 1 2 3 3 3 0 Spc7 kinetochore protein ApoO PF09769.9 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.049 13.6 0.8 0.049 13.6 0.8 3.7 2 1 2 4 4 4 0 Apolipoprotein O Lebercilin PF15619.6 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.051 13.2 38.3 0.011 15.4 19.7 3.5 1 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease SPATA24 PF15175.6 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.096 12.6 36.7 1.8 8.4 9.0 4.0 1 1 2 3 3 3 0 Spermatogenesis-associated protein 24 Fez1 PF06818.15 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.18 12.2 34.2 0.78 10.2 16.9 2.8 1 1 1 2 2 2 0 Fez1 Tropomyosin_1 PF12718.7 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.46 10.6 41.7 0.083 13.0 18.7 3.6 1 1 2 3 3 3 0 Tropomyosin like DAHP_snth_FXD PF18152.1 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.59 10.0 4.0 5.9 6.8 0.1 3.4 2 1 1 3 3 3 0 DAHP synthase ferredoxin-like domain DUF4407 PF14362.6 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.63 9.3 29.7 0.037 13.4 14.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) MbeD_MobD PF04899.12 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 0.94 9.6 12.3 1.7 8.8 0.4 4.0 2 1 1 4 4 4 0 MbeD/MobD like TACC_C PF05010.14 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 1.6 8.5 36.0 15 5.3 8.8 3.4 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal HOOK PF05622.12 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 1.7 6.7 41.9 1.5 6.9 18.8 2.3 1 1 1 2 2 2 0 HOOK protein Golgin_A5 PF09787.9 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 2 7.8 39.0 0.028 13.9 15.6 2.4 1 1 1 2 2 2 0 Golgin subfamily A member 5 MAD PF05557.13 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 2.2 6.6 41.7 0.0069 14.8 22.2 2.0 1 1 1 2 2 2 0 Mitotic checkpoint protein Jnk-SapK_ap_N PF09744.9 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 2.3 8.4 38.4 6.9 6.9 9.3 3.1 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 TPR_MLP1_2 PF07926.12 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 2.7 8.1 41.0 0.38 10.8 14.6 4.1 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein Fib_alpha PF08702.10 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 8.2 6.6 41.8 0.48 10.6 11.9 3.2 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family CALCOCO1 PF07888.11 NODE_29246_length_741_cov_123.305949_g23083_i0reverse_frame_1 - 8.3 5.1 33.4 0.83 8.4 26.6 1.9 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like GFD1 PF17331.2 NODE_29231_length_741_cov_354.746459_g5530_i2reverse_frame_1 - 0.002 18.3 1.8 0.004 17.3 1.8 1.4 1 0 0 1 1 1 1 GFD1 mRNA transport factor Pkinase PF00069.25 NODE_29222_length_742_cov_2.458274_g23062_i0reverse_frame_2 - 6.4e-07 29.0 0.1 8.8e-07 28.5 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_29222_length_742_cov_2.458274_g23062_i0reverse_frame_2 - 0.0016 17.8 0.0 0.0022 17.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase YchF-GTPase_C PF06071.13 NODE_29222_length_742_cov_2.458274_g23062_i0reverse_frame_2 - 0.063 13.5 0.3 0.12 12.6 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF933) HATPase_c PF02518.26 NODE_29218_length_742_cov_4.026874_g23058_i0reverse_frame_3 - 0.031 14.8 0.0 0.046 14.2 0.0 1.2 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MgtE PF01769.16 NODE_29198_length_742_cov_185.264498_g23040_i0reverse_frame_2 - 1.8 8.9 17.2 5.5 7.4 10.3 2.3 2 1 0 2 2 2 0 Divalent cation transporter OmpH PF03938.14 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_3 - 1.5 9.1 21.2 2.8 8.3 21.2 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TAF4 PF05236.14 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 0.19 11.5 14.7 0.24 11.1 14.7 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family DDHD PF02862.17 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 0.31 11.2 5.0 0.32 11.1 5.0 1.2 1 0 0 1 1 1 0 DDHD domain Ndc1_Nup PF09531.10 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 0.36 9.5 6.4 0.38 9.4 6.4 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Mucin15 PF15672.5 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 1.3 8.5 7.6 1.6 8.2 7.6 1.1 1 0 0 1 1 1 0 Cell-membrane associated Mucin15 Presenilin PF01080.17 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 2.2 7.0 10.1 2.9 6.6 10.1 1.2 1 0 0 1 1 1 0 Presenilin MGC-24 PF05283.11 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 2.5 8.5 12.1 4.2 7.8 12.1 1.3 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF4816 PF16086.5 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 3 7.8 9.0 6.3 6.8 3.7 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4816) PAP1 PF08601.10 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 4.7 6.8 12.3 5.8 6.5 12.3 1.1 1 0 0 1 1 1 0 Transcription factor PAP1 SseC PF04888.12 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 5.6 6.5 35.0 23 4.5 35.0 1.8 1 1 0 1 1 1 0 Secretion system effector C (SseC) like family HK97-gp10_like PF04883.12 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 5.8 8.0 18.8 45 5.1 6.4 3.1 1 1 1 2 2 2 0 Bacteriophage HK97-gp10, putative tail-component GREB1 PF15782.5 NODE_29198_length_742_cov_185.264498_g23040_i0forward_frame_2 - 8.8 3.3 9.8 10 3.0 9.8 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer DUF2177 PF09945.9 NODE_29122_length_744_cov_83.528914_g22977_i0forward_frame_2 - 0.064 13.3 0.4 0.12 12.5 0.4 1.6 1 1 0 1 1 1 0 Predicted membrane protein (DUF2177) RCC1_2 PF13540.6 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 2.3e-09 36.8 14.1 0.36 10.7 0.0 5.5 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat ATP-synt_Eps PF04627.13 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 0.00013 21.9 11.3 1.8 8.6 0.1 5.5 6 0 0 6 6 6 2 Mitochondrial ATP synthase epsilon chain Crystall PF00030.19 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 0.00067 19.8 0.6 3.1 8.1 0.0 4.1 3 1 1 4 4 4 1 Beta/Gamma crystallin Apo-CIII PF05778.12 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 0.01 15.5 6.2 25 4.6 0.0 4.4 5 0 0 5 5 5 0 Apolipoprotein CIII (Apo-CIII) DUF4984 PF16372.5 NODE_29113_length_744_cov_116.495063_g22968_i0reverse_frame_3 - 0.062 13.2 0.8 49 3.8 0.0 3.9 5 0 0 5 5 5 0 Domain of unknown function (DUF4984) MyTH4 PF00784.17 NODE_29113_length_744_cov_116.495063_g22968_i0forward_frame_3 - 0.00033 21.1 9.7 0.84 10.2 0.2 4.3 4 0 0 4 4 4 4 MyTH4 domain DUF2530 PF10745.9 NODE_29113_length_744_cov_116.495063_g22968_i0forward_frame_3 - 0.17 12.1 11.4 20 5.5 0.1 4.7 4 2 1 5 5 5 0 Protein of unknown function (DUF2530) IL12 PF03039.14 NODE_29113_length_744_cov_116.495063_g22968_i0forward_frame_2 - 0.36 10.1 2.8 6.8 6.0 0.3 2.6 1 1 2 3 3 3 0 Interleukin-12 alpha subunit DUF4404 PF14357.6 NODE_29104_length_744_cov_177.447109_g22959_i0reverse_frame_2 - 0.36 11.5 0.2 0.36 11.5 0.2 3.4 1 1 3 4 4 4 0 Domain of unknown function (DUF4404) TauE PF01925.19 ORF99690 - 6.1e-15 55.5 0.3 8.1e-15 55.1 0.3 1.1 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE COX14 PF14880.6 ORF99690 - 0.1 12.4 0.0 0.26 11.2 0.0 1.7 1 0 0 1 1 1 0 Cytochrome oxidase c assembly HrpF PF06266.12 ORF99690 - 0.12 12.7 1.7 0.24 11.7 1.7 1.5 1 0 0 1 1 1 0 HrpF protein LapA_dom PF06305.11 ORF99690 - 0.35 10.7 0.2 0.35 10.7 0.2 2.7 3 1 0 3 3 3 0 Lipopolysaccharide assembly protein A domain O-antigen_lig PF13425.6 ORF99690 - 0.4 9.4 11.1 4.4 6.0 11.4 2.0 1 1 1 2 2 2 0 O-antigen ligase like membrane protein DUF2681 PF10883.8 ORF99690 - 0.92 10.0 6.8 0.14 12.6 0.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2681) DUF4672 PF15716.5 ORF99690 - 1.2 8.7 3.2 1.8 8.1 3.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) S_4TM PF18159.1 ORF99690 - 1.4 8.2 4.3 0.62 9.3 0.3 2.2 1 1 1 2 2 2 0 SMODS-associating 4TM effector domain PGK PF00162.19 ORF97861 - 3e-82 276.6 3.3 3.5e-82 276.4 3.3 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase DUF4126 PF13548.6 ORF97861 - 0.065 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4126) Med19 PF10278.9 ORF96613 - 0.01 15.8 2.5 0.01 15.8 2.5 2.4 1 1 1 2 2 2 0 Mediator of RNA pol II transcription subunit 19 Luteo_Vpg PF01659.16 ORF96613 - 0.043 14.1 2.2 8.7 6.7 0.2 2.4 2 0 0 2 2 2 0 Luteovirus putative VPg genome linked protein Adeno_PV PF03910.13 ORF96613 - 0.35 9.5 8.1 0.16 10.7 0.8 2.1 2 0 0 2 2 2 0 Adenovirus minor core protein PV DUF3644 PF12358.8 ORF96613 - 1.2 9.7 5.1 0.49 10.9 1.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3644) SR-25 PF10500.9 ORF96613 - 4.9 6.7 19.9 1.2 8.7 8.3 2.1 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein CactinC_cactus PF09732.9 ORF94576 - 1.8e-58 195.9 7.9 2.3e-58 195.6 7.9 1.1 1 0 0 1 1 1 1 Cactus-binding C-terminus of cactin protein Methyltransf_PK PF05891.12 ORF92221 - 1.6e-68 230.5 0.0 2e-68 230.2 0.0 1.0 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Methyltransf_25 PF13649.6 ORF92221 - 9.7e-12 45.4 0.0 2.8e-11 43.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF92221 - 1.5e-10 41.6 0.0 2.4e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF92221 - 7.2e-07 29.9 0.0 1.1e-06 29.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF92221 - 7.3e-05 22.7 0.0 0.00014 21.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF92221 - 7.3e-05 22.6 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF92221 - 0.00027 20.6 0.0 0.00038 20.1 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 ORF92221 - 0.004 16.7 0.0 0.0061 16.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.18 ORF92221 - 0.017 14.4 0.0 0.026 13.8 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase domain Bin3 PF06859.12 ORF92221 - 0.083 13.5 0.0 0.17 12.5 0.0 1.6 1 0 0 1 1 1 0 Bicoid-interacting protein 3 (Bin3) CMAS PF02353.20 ORF92221 - 0.094 12.0 0.7 0.29 10.4 0.0 1.9 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase RrnaAD PF00398.20 ORF92221 - 0.1 11.6 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Ubie_methyltran PF01209.18 ORF92221 - 0.16 11.3 0.0 0.25 10.7 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family zf-nanos PF05741.13 ORF88934 - 0.16 12.2 4.1 0.93 9.8 4.0 2.3 1 1 0 1 1 1 0 Nanos RNA binding domain Proteasome PF00227.26 ORF88812 - 1.3e-54 184.6 1.3 1.1e-53 181.6 1.3 2.0 1 1 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF88812 - 3.1e-10 39.5 0.2 5.7e-10 38.7 0.2 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature POT1 PF02765.17 ORF88812 - 0.021 14.7 0.0 0.027 14.3 0.0 1.3 1 0 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 Ufd2P_core PF10408.9 ORF77713 - 5.5e-25 88.1 0.0 6.6e-25 87.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin elongating factor core U-box PF04564.15 ORF77713 - 2.1e-17 63.0 0.1 3.8e-17 62.2 0.1 1.4 1 0 0 1 1 1 1 U-box domain AAA_lid_5 PF17865.1 ORF77713 - 0.057 13.5 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Midasin AAA lid domain TssR PF17643.1 ORF77713 - 0.094 10.6 0.1 0.1 10.6 0.1 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssR KLRAQ PF10205.9 ORF77713 - 0.1 12.8 0.0 0.23 11.7 0.0 1.6 1 0 0 1 1 1 0 Predicted coiled-coil domain-containing protein UPF0242 PF06785.11 ORF75138 - 2.7 8.0 23.5 1.5e+02 2.4 23.5 2.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus LMBR1 PF04791.16 ORF75138 - 4.9 5.9 9.3 5.6 5.7 9.3 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF724 PF05266.14 ORF75138 - 5.5 6.8 14.8 4.7 7.0 6.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) bZIP_1 PF00170.21 ORF75138 - 9.7 6.4 12.8 0.12 12.5 1.9 2.9 2 1 0 2 2 2 0 bZIP transcription factor Glutaredoxin PF00462.24 ORF74792 - 4.9e-16 58.7 0.1 9.3e-16 57.8 0.1 1.5 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 ORF74792 - 0.0003 21.1 0.0 0.00063 20.1 0.0 1.6 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_3 PF13192.6 ORF74792 - 0.0026 17.8 0.0 0.0065 16.5 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin domain SH3BGR PF04908.15 ORF74792 - 0.0028 17.8 0.1 0.006 16.7 0.1 1.5 1 0 0 1 1 1 1 SH3-binding, glutamic acid-rich protein TraF PF13728.6 ORF74792 - 0.012 15.4 0.0 0.022 14.6 0.0 1.4 1 0 0 1 1 1 0 F plasmid transfer operon protein Thioredoxin_2 PF13098.6 ORF74792 - 0.014 15.8 0.1 0.028 14.9 0.1 1.4 1 0 0 1 1 1 0 Thioredoxin-like domain 14-3-3 PF00244.20 ORF71305 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein 14-3-3 PF00244.20 ORF69976 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein 14-3-3 PF00244.20 ORF68435 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein NRD1_2 PF01995.16 ORF63988 - 0.019 14.3 0.5 0.041 13.2 0.5 1.5 1 0 0 1 1 1 0 NrpR regulatory domains NRD1 and 2 U-box PF04564.15 ORF63812 - 1.7e-07 31.3 0.0 4.1e-07 30.1 0.0 1.7 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 ORF63812 - 0.0016 18.2 0.3 0.028 14.2 0.0 2.6 2 1 1 3 3 3 1 Zinc-finger of the MIZ type in Nse subunit PPDK_N PF01326.19 ORF63812 - 0.023 14.0 0.4 0.033 13.5 0.4 1.3 1 0 0 1 1 1 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RLAN PF14401.6 ORF63812 - 0.041 13.5 0.0 0.059 13.0 0.0 1.4 1 0 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain T3SS_NleG PF06416.12 ORF63812 - 0.1 12.5 0.2 0.42 10.5 0.1 2.0 2 1 0 2 2 2 0 Effector protein NleG ABC_tran_CTD PF16326.5 ORF63812 - 3.1 8.1 7.6 1.3 9.3 0.4 2.8 2 1 0 2 2 2 0 ABC transporter C-terminal domain Orthopox_B11R PF07033.11 ORF62621 - 0.0072 16.1 5.8 0.42 10.4 0.3 3.0 3 0 0 3 3 3 2 Orthopoxvirus B11R protein 14-3-3 PF00244.20 ORF61977 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein TetR_C_19 PF17924.1 ORF61961 - 0.026 15.1 1.5 0.026 15.1 1.5 1.7 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain NAM-associated PF14303.6 ORF61610 - 0.97 10.1 17.1 1.9 9.2 17.1 1.5 1 1 0 1 1 1 0 No apical meristem-associated C-terminal domain RCC1_2 PF13540.6 ORF5993 - 2e-14 52.9 10.1 7.7e-07 28.7 0.6 3.7 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat DUF1972 PF09314.11 ORF59780 - 0.17 11.5 0.0 0.24 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1972) Response_reg PF00072.24 ORF56023 - 2.1e-25 89.0 0.1 3.4e-25 88.4 0.1 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 ORF56023 - 1e-19 70.3 0.1 2.2e-19 69.3 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Macro PF01661.21 ORF55165 - 8.7e-34 116.1 0.2 3.9e-33 114.0 0.1 2.1 1 1 1 2 2 2 1 Macro domain DUF2018 PF09442.10 ORF55165 - 0.043 14.8 1.9 0.11 13.5 1.5 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF2018) DUF1264 PF06884.11 ORF55165 - 0.053 13.1 0.0 0.11 12.1 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1264) Matrilin_ccoil PF10393.9 ORF55040 - 0.036 13.9 0.4 6.6 6.7 0.1 2.3 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin PDZ_6 PF17820.1 ORF54725 - 1.9e-05 24.4 0.1 0.15 11.9 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF54725 - 0.0014 18.9 0.1 4.2 7.8 0.0 3.0 3 1 0 3 3 3 2 PDZ domain PDZ_2 PF13180.6 ORF54725 - 0.054 13.8 0.0 3.9 7.9 0.0 2.4 2 0 0 2 2 2 0 PDZ domain GDPD PF03009.17 ORF46067 - 5.5e-42 144.3 0.0 6.8e-42 144.0 0.0 1.1 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family GDPD_2 PF13653.6 ORF46067 - 0.00012 22.4 2.1 0.00035 20.9 0.0 2.7 3 0 0 3 3 3 1 Glycerophosphoryl diester phosphodiesterase family Patatin PF01734.22 ORF45785 - 2.6e-07 31.0 0.0 4.6e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase DUF1272 PF06906.11 ORF39144 - 0.013 15.6 3.8 0.036 14.2 3.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Pkinase_Tyr PF07714.17 ORF38141 - 1.3e-55 188.5 0.1 1.5e-55 188.3 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF38141 - 9.8e-55 185.7 0.4 1.2e-54 185.5 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF38141 - 0.00012 21.0 0.0 0.00017 20.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF38141 - 0.0002 20.5 0.2 0.00025 20.1 0.2 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF38141 - 0.00064 19.1 0.6 0.0011 18.3 0.5 1.5 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 ORF38141 - 0.0011 18.7 2.2 0.0018 17.9 2.2 1.3 1 0 0 1 1 1 1 Choline/ethanolamine kinase RIO1 PF01163.22 ORF38141 - 0.0021 17.7 0.7 0.0036 16.9 0.7 1.4 1 0 0 1 1 1 1 RIO1 family Kinase-like PF14531.6 ORF38141 - 0.039 13.2 0.0 0.053 12.8 0.0 1.3 1 0 0 1 1 1 0 Kinase-like APH PF01636.23 ORF38141 - 0.063 13.2 0.0 0.098 12.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family NIF3 PF01784.18 ORF36317 - 1.3e-57 195.3 0.0 1.5e-57 195.0 0.0 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) Atrophin-1 PF03154.15 ORF35529 - 0.27 9.5 10.9 0.32 9.2 10.9 1.0 1 0 0 1 1 1 0 Atrophin-1 family SAP130_C PF16014.5 ORF35529 - 3.8 6.5 18.5 4.9 6.2 18.5 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus Endomucin PF07010.12 ORF35529 - 7.3 6.5 18.3 9.5 6.1 18.3 1.0 1 0 0 1 1 1 0 Endomucin GST_N PF02798.20 ORF33546 - 2.6e-10 40.5 0.0 4.6e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF33546 - 4.8e-10 39.5 0.0 8.3e-10 38.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF33546 - 1.1e-09 38.6 0.0 1.7e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF33546 - 1.2e-07 31.8 0.0 1.8e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF33546 - 9.5e-05 22.6 0.0 0.00015 22.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF33546 - 0.00076 19.4 0.0 0.0014 18.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain zf-CCCH_7 PF18586.1 ORF33546 - 0.0013 19.0 0.3 1.2 9.5 0.0 2.3 2 0 0 2 2 2 2 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 Protoglobin PF11563.8 ORF33546 - 0.061 13.2 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Protoglobin Rdx PF10262.9 ORF32662 - 1.1e-12 48.0 0.0 1.8e-12 47.3 0.0 1.4 1 0 0 1 1 1 1 Rdx family DUF1422 PF07226.11 ORF32662 - 0.094 12.7 1.1 0.42 10.6 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1422) DUF2798 PF11391.8 ORF32662 - 0.11 12.6 2.9 0.21 11.6 2.9 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2798) HTH_36 PF13730.6 ORF32366 - 0.16 12.0 1.1 2.3 8.2 0.1 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain TPH PF13868.6 ORF2902 - 5.3e-24 84.4 65.8 8.1e-24 83.8 65.8 1.3 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain ABATE PF07336.11 ORF2902 - 0.094 13.4 3.0 0.13 12.9 3.0 1.3 1 0 0 1 1 1 0 Putative stress-induced transcription regulator DUF4286 PF14114.6 ORF2902 - 0.14 12.7 5.0 0.093 13.2 2.2 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4286) Arrestin_N PF00339.29 ORF27935 - 1e-06 28.9 0.0 1.7e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Arrestin_C PF02752.22 ORF27935 - 0.017 15.5 0.0 0.053 14.0 0.0 1.8 1 1 1 2 2 2 0 Arrestin (or S-antigen), C-terminal domain LDB19 PF13002.7 ORF27935 - 0.076 12.7 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Arrestin_N terminal like 14-3-3 PF00244.20 ORF27558 - 2.6e-95 318.1 8.7 2.9e-95 318.0 8.7 1.0 1 0 0 1 1 1 1 14-3-3 protein Gamma_PGA_hydro PF05908.11 ORF26778 - 0.076 12.4 0.2 0.076 12.4 0.2 1.9 2 1 0 2 2 2 0 Poly-gamma-glutamate hydrolase CRF PF00473.17 ORF25374 - 7.7 6.7 7.0 0.4 10.8 0.7 2.1 2 0 0 2 2 2 0 Corticotropin-releasing factor family MORN PF02493.20 ORF24317 - 1.3e-27 94.0 56.5 6.2e-09 35.2 2.4 7.9 8 0 0 8 8 8 6 MORN repeat MORN PF02493.20 ORF23974 - 5.7e-08 32.2 10.2 3.1e-05 23.6 0.2 4.4 4 0 0 4 4 4 3 MORN repeat YedD PF13987.6 ORF23893 - 0.02 14.7 0.0 0.042 13.7 0.0 1.5 1 0 0 1 1 1 0 YedD-like protein LRR_1 PF00560.33 ORF23893 - 0.13 12.9 0.1 2.1 9.2 0.0 3.2 3 0 0 3 3 3 0 Leucine Rich Repeat Gly_rich PF12810.7 ORF23204 - 0.81 9.6 15.3 0.061 13.2 9.8 1.7 1 1 1 2 2 2 0 Glycine rich protein FKBP_C PF00254.28 ORF22212 - 6.3e-24 84.1 0.0 1.2e-23 83.3 0.0 1.4 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase XPC-binding PF09280.11 ORF22212 - 0.12 12.1 0.2 0.25 11.1 0.2 1.5 1 0 0 1 1 1 0 XPC-binding domain Ank_2 PF12796.7 ORF20171 - 4.6e-08 33.5 0.0 1.6e-06 28.6 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF20171 - 1.8e-06 27.8 0.0 0.0029 18.0 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 ORF20171 - 1.9e-06 28.3 0.0 0.006 17.1 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF20171 - 2.6e-06 27.6 0.0 0.0009 19.5 0.0 3.0 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 ORF20171 - 1.6e-05 25.1 0.0 0.009 16.4 0.0 2.8 2 0 0 2 2 2 2 Ankyrin repeat Ribosomal_S5 PF00333.20 ORF19991 - 1.6e-25 88.8 0.1 2.5e-25 88.2 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 ORF19991 - 4.4e-13 48.5 0.2 9.1e-13 47.5 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain LRR_6 PF13516.6 ORF19423 - 8.1e-08 31.7 12.9 0.08 13.0 0.0 5.5 5 0 0 5 5 5 3 Leucine Rich repeat LRR_4 PF12799.7 ORF19423 - 0.00091 19.6 10.2 2.1 8.9 4.6 4.2 3 1 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 ORF19423 - 0.007 16.8 6.6 24 6.0 0.7 5.5 6 1 0 6 6 6 1 Leucine Rich Repeat Pox_L5 PF04872.13 ORF19423 - 0.18 11.7 0.1 0.18 11.7 0.1 2.1 3 0 0 3 3 3 0 Poxvirus L5 protein family Phytochelatin PF05023.14 ORF18921 - 0.0041 16.4 0.0 0.0082 15.4 0.0 1.5 1 0 0 1 1 1 1 Phytochelatin synthase DUF29 PF01724.16 ORF150871 - 0.054 13.7 1.7 0.62 10.3 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF29 adh_short PF00106.25 ORF150447 - 9.6e-28 97.0 0.1 1.2e-27 96.6 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF150447 - 3.2e-15 56.3 0.0 4e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.10 ORF150447 - 0.012 15.0 0.1 0.015 14.7 0.1 1.3 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) MSA-2c PF12238.8 ORF149955 - 0.58 10.1 4.6 0.86 9.6 4.6 1.2 1 0 0 1 1 1 0 Merozoite surface antigen 2c # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks85.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks85.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks85.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks85.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:33:50 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Med1 PF10744.9 ORF145043 - 0.0058 15.7 0.3 0.0096 15.0 0.3 1.4 1 0 0 1 1 1 1 Mediator of RNA polymerase II transcription subunit 1 Speriolin_N PF15058.6 ORF145043 - 0.8 9.8 2.8 0.32 11.1 0.3 1.5 2 0 0 2 2 2 0 Speriolin N terminus STI1 PF17830.1 ORF144620 - 1.7e-17 63.1 8.5 7.8e-09 35.3 0.1 3.5 2 1 1 3 3 3 3 STI1 domain DUF445 PF04286.12 ORF144620 - 0.00036 20.5 6.1 0.073 12.9 1.6 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF445) Ins_allergen_rp PF06757.13 ORF144620 - 0.027 14.4 0.0 0.11 12.5 0.0 2.0 1 1 0 1 1 1 0 Insect allergen related repeat, nitrile-specifier detoxification 1-cysPrx_C PF10417.9 ORF144620 - 0.05 13.5 1.2 0.18 11.7 0.2 2.5 2 0 0 2 2 2 0 C-terminal domain of 1-Cys peroxiredoxin CotJB PF12652.7 ORF144620 - 0.063 13.5 1.4 0.85 9.9 0.1 2.7 2 1 1 3 3 3 0 CotJB protein Gag_p24 PF00607.20 ORF144620 - 0.091 12.6 0.9 9.9 6.0 0.1 2.1 2 0 0 2 2 2 0 gag gene protein p24 (core nucleocapsid protein) AAA_35 PF14516.6 ORF144620 - 0.14 10.9 0.4 4.5 6.0 0.0 2.3 2 0 0 2 2 2 0 AAA-like domain Bunya_G1 PF03557.15 ORF144620 - 0.17 9.9 0.3 0.25 9.3 0.0 1.3 2 0 0 2 2 2 0 Bunyavirus glycoprotein G1 Stevor PF17410.2 ORF144620 - 0.56 9.7 3.8 0.8 9.2 0.5 2.1 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame HisK_sensor PF18698.1 ORF144620 - 0.57 10.6 5.6 6.9 7.1 1.1 2.3 2 0 0 2 2 2 0 Histidine kinase sensor domain FluMu_N PF17891.1 ORF144620 - 1.4 8.7 3.3 5.4 6.9 0.3 2.8 3 0 0 3 3 3 0 Mu-like prophage FluMu N-terminal domain DUF4533 PF15047.6 ORF144620 - 6.4 6.3 6.2 4.3 6.8 3.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4533) Com_YlbF PF06133.11 ORF144620 - 8.7 7.0 15.3 66 4.2 8.8 3.4 2 2 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA DnaJ PF00226.31 ORF14258 - 2e-19 69.4 0.6 4.8e-19 68.2 0.2 1.8 2 0 0 2 2 2 1 DnaJ domain Anoctamin PF04547.12 ORF140937 - 8.5e-31 107.3 0.2 1e-30 107.0 0.2 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel CRAL_TRIO PF00650.20 ORF133760 - 2.9e-07 30.4 0.5 5.3e-07 29.5 0.0 1.7 2 0 0 2 2 2 1 CRAL/TRIO domain NPA PF16469.5 ORF133760 - 0.017 15.7 4.3 0.062 13.9 3.2 2.1 2 0 0 2 2 2 0 Nematode polyprotein allergen ABA-1 Rubrerythrin PF02915.17 ORF133760 - 0.026 14.9 3.1 0.058 13.8 2.8 1.8 1 1 0 1 1 1 0 Rubrerythrin Tautomerase_3 PF14832.6 ORF133760 - 0.06 13.6 1.5 0.2 11.9 1.5 1.8 1 1 0 1 1 1 0 Putative oxalocrotonate tautomerase enzyme Salp15 PF12115.8 ORF133760 - 0.59 10.6 3.6 1.3 9.4 1.0 2.1 1 1 0 2 2 2 0 Salivary protein of 15kDa inhibits CD4+ T cell activation RecG_N PF17190.4 ORF133760 - 0.64 10.8 8.6 4.9 8.0 3.3 3.1 1 1 1 3 3 3 0 RecG N-terminal helical domain DUF4848 PF16140.5 ORF133760 - 1.7 8.1 12.2 0.23 11.0 4.2 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4848) KASH_CCD PF14662.6 ORF132356 - 0.47 10.3 6.0 0.78 9.5 6.0 1.3 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH BRO1 PF03097.18 ORF132356 - 0.54 9.0 1.8 4.7 5.9 0.2 2.0 1 1 1 2 2 2 0 BRO1-like domain ADIP PF11559.8 ORF132356 - 5.8 7.0 8.7 1.1 9.3 4.3 1.9 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DUF1192 PF06698.11 ORF132356 - 9 6.4 10.8 13 5.9 1.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) DUF1272 PF06906.11 ORF130089 - 0.013 15.6 3.8 0.036 14.2 3.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Methyltransf_11 PF08241.12 ORF119311 - 3.4e-17 62.9 0.0 5.2e-17 62.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF119311 - 1.2e-15 57.9 0.0 1.9e-15 57.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF119311 - 1.7e-11 44.1 0.0 2.3e-11 43.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF119311 - 2.1e-07 31.6 0.0 3.6e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF119311 - 6.5e-06 25.7 0.0 1e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF119311 - 0.00013 21.8 0.0 0.00019 21.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF119311 - 0.00033 20.2 0.0 0.00051 19.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Spermine_synth PF01564.17 ORF119311 - 0.004 16.6 0.0 0.0084 15.5 0.0 1.5 2 0 0 2 2 2 1 Spermine/spermidine synthase domain Methyltransf_29 PF03141.16 ORF119311 - 0.0056 15.3 0.0 0.0073 14.9 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase PrmA PF06325.13 ORF119311 - 0.25 10.7 0.0 0.43 9.9 0.0 1.5 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) CSD PF00313.22 ORF117516 - 5.9e-28 96.5 1.0 3.5e-16 58.8 0.1 2.2 2 0 0 2 2 2 2 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF117516 - 2.8e-09 36.5 4.2 0.00051 19.7 1.8 3.4 2 1 0 2 2 2 2 Ribonuclease B OB domain DUF2671 PF10877.8 ORF117516 - 0.0027 17.5 0.2 1 9.2 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF2671) DUF3915 PF13054.6 ORF117516 - 0.28 11.2 20.5 0.25 11.3 12.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3915) PRP38_assoc PF12871.7 ORF117516 - 2.9 8.6 56.4 0.2 12.3 8.5 2.6 2 1 0 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term DJ-1_PfpI PF01965.24 ORF115706 - 0.0026 17.6 0.1 0.0057 16.5 0.1 1.6 1 1 0 1 1 1 1 DJ-1/PfpI family PRP1_N PF06424.12 ORF115147 - 0.35 11.3 5.3 0.1 13.0 2.0 1.8 1 1 1 2 2 2 0 PRP1 splicing factor, N-terminal KAR9 PF08580.10 ORF113829 - 0.096 11.2 6.4 0.12 10.9 6.4 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 CSD PF00313.22 ORF107353 - 1.9e-05 24.4 0.1 3.2e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF107353 - 0.0042 16.7 0.2 0.0091 15.7 0.2 1.5 1 0 0 1 1 1 1 Ribonuclease B OB domain PPR_2 PF13041.6 ORF106636 - 4.6e-38 129.2 0.3 5.2e-10 39.4 0.0 5.6 1 1 5 6 6 6 5 PPR repeat family PPR_3 PF13812.6 ORF106636 - 3.2e-28 97.6 0.0 7.5e-10 38.7 0.0 4.5 2 1 3 5 5 5 4 Pentatricopeptide repeat domain PPR PF01535.20 ORF106636 - 5.2e-21 73.4 3.3 0.0001 22.3 0.0 6.1 6 0 0 6 6 6 5 PPR repeat PPR_1 PF12854.7 ORF106636 - 1e-13 50.7 3.0 0.0082 15.8 0.0 7.0 8 1 0 8 8 8 4 PPR repeat PPR_long PF17177.4 ORF106636 - 1.6e-08 34.1 0.0 0.0002 20.8 0.0 2.2 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP Clathrin PF00637.20 ORF106636 - 0.0012 18.7 0.0 1.1 9.2 0.0 3.2 1 1 1 3 3 3 1 Region in Clathrin and VPS Flu_B_NS1 PF02942.14 ORF106636 - 0.035 13.2 0.4 4.8 6.2 0.0 3.1 2 2 2 4 4 4 0 Influenza B non-structural protein (NS1) Phage_tail_APC PF16778.5 ORF106636 - 0.053 13.4 0.0 1.1 9.2 0.0 2.5 3 0 0 3 3 3 0 Phage tail assembly chaperone protein ATP-grasp_4 PF13535.6 ORF106636 - 0.092 12.3 0.1 6.5 6.3 0.0 3.1 1 1 3 4 4 4 0 ATP-grasp domain Kunitz_legume PF00197.18 ORF106636 - 1.1 9.1 4.9 51 3.7 0.1 4.0 1 1 4 5 5 5 0 Trypsin and protease inhibitor DSPc PF00782.20 ORF105723 - 1.6e-13 50.6 0.0 2.1e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain CDKN3 PF05706.12 ORF105723 - 0.0014 18.3 0.0 0.0022 17.7 0.0 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase PF00102.27 ORF105723 - 0.028 14.0 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF105723 - 0.048 13.8 0.0 0.072 13.2 0.0 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate DUF5388 PF17363.2 ORF102087 - 0.039 14.1 0.0 0.38 11.0 0.0 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5388) DUF5305 PF17231.2 NODE_29458_length_737_cov_77.331909_g23254_i0forward_frame_1 - 0.18 11.2 3.1 0.079 12.3 0.7 1.6 1 1 1 2 2 2 0 Family of unknown function (DUF5305) Leader_Erm PF08253.11 NODE_29451_length_737_cov_132.267806_g23248_i0forward_frame_1 - 5.9 7.4 9.6 45 4.7 0.4 4.0 3 0 0 3 3 3 0 Erm Leader peptide Ribosom_S12_S23 PF00164.25 NODE_29440_length_737_cov_226.542735_g23238_i0reverse_frame_1 - 1.9e-25 88.7 0.1 2.8e-25 88.2 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S12/S23 PAS PF00989.25 NODE_29416_length_738_cov_2.557610_g23223_i0forward_frame_1 - 0.013 15.5 0.0 0.019 15.0 0.0 1.4 1 0 0 1 1 1 0 PAS fold Queuosine_synth PF02547.15 NODE_29368_length_739_cov_73.397727_g23185_i0reverse_frame_2 - 0.046 12.8 0.0 0.062 12.4 0.0 1.1 1 0 0 1 1 1 0 Queuosine biosynthesis protein DUF3716 PF12511.8 NODE_29361_length_739_cov_110.997159_g23178_i0reverse_frame_3 - 5.3 7.2 15.8 0.46 10.6 9.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3716) DUF2201_N PF13203.6 NODE_29339_length_739_cov_501.339489_g23157_i0reverse_frame_3 - 2.1 7.9 6.6 3.6 7.1 6.6 1.5 1 1 0 1 1 1 0 Putative metallopeptidase domain RRM_1 PF00076.22 NODE_29311_length_740_cov_78.296454_g23138_i0reverse_frame_3 - 0.012 15.4 0.0 0.031 14.1 0.0 1.7 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF3648 PF12364.8 NODE_29311_length_740_cov_78.296454_g23138_i0forward_frame_3 - 0.079 13.2 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3648) Arrestin_N PF00339.29 NODE_29231_length_741_cov_354.746459_g5530_i2reverse_frame_3 - 4.1e-08 33.4 0.0 5.9e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain YkuD PF03734.14 ORF99165 - 1.3e-06 28.9 0.3 2.7e-06 27.9 0.2 1.6 1 1 1 2 2 2 1 L,D-transpeptidase catalytic domain TPK_catalytic PF04263.16 ORF96046 - 2.5e-29 101.7 0.0 3.8e-29 101.2 0.0 1.3 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, catalytic domain TPK_B1_binding PF04265.14 ORF96046 - 5.8e-13 48.3 0.2 1.3e-12 47.2 0.2 1.7 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, vitamin B1 binding domain MipA PF06629.12 ORF92957 - 1.7e-49 169.0 5.6 1.9e-49 168.8 5.6 1.0 1 0 0 1 1 1 1 MltA-interacting protein MipA Cu_bind_CorA PF18252.1 ORF92957 - 0.089 12.4 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Copper(I)-binding protein CorA Fmp27_SW PF10305.9 ORF87045 - 0.02 15.6 2.1 0.035 14.8 1.6 1.8 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain Dynein_AAA_lid PF17852.1 ORF87045 - 0.046 13.8 4.1 1.4 9.0 0.4 2.9 3 0 0 3 3 3 0 Dynein heavy chain AAA lid domain RQC PF09382.10 ORF87045 - 0.097 12.5 0.4 8.2 6.2 0.0 2.9 2 1 1 3 3 3 0 RQC domain AIPR PF10592.9 ORF87045 - 0.32 10.6 5.7 0.054 13.1 1.7 1.6 1 1 1 2 2 2 0 AIPR protein zf-RING_2 PF13639.6 ORF86542 - 1e-06 28.9 2.3 1e-06 28.9 2.3 4.5 3 1 1 5 5 5 1 Ring finger domain zf-RING_5 PF14634.6 ORF86542 - 0.00053 19.9 1.7 0.00053 19.9 1.7 4.9 2 1 2 4 4 4 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF86542 - 0.00072 19.3 2.6 0.00072 19.3 2.6 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF86542 - 0.0039 17.5 2.0 0.0039 17.5 2.0 4.3 3 2 0 3 3 3 1 RING-H2 zinc finger domain oligo_HPY PF08352.12 ORF85517 - 6.9e-18 64.9 0.1 1.2e-17 64.2 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region ABC_tran PF00005.27 ORF85517 - 1e-12 48.8 0.0 1.6e-12 48.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF85517 - 9e-06 25.7 0.1 1.2e-05 25.3 0.1 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Propep_M14 PF02244.16 ORF85517 - 0.095 13.1 0.1 0.23 11.9 0.1 1.6 1 0 0 1 1 1 0 Carboxypeptidase activation peptide SMC_N PF02463.19 ORF85517 - 0.13 11.6 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF85517 - 0.14 12.4 0.0 0.51 10.6 0.0 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF2070 PF09843.9 ORF85175 - 0.34 9.1 18.2 0.38 9.0 18.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Pkinase PF00069.25 ORF85087 - 6.6e-41 140.4 0.0 8.7e-41 140.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85087 - 4.3e-17 62.2 0.0 6e-17 61.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 ORF85087 - 0.0022 18.0 0.0 0.0033 17.4 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF85087 - 0.004 16.8 0.5 0.016 14.8 0.3 1.9 1 1 1 2 2 2 1 Choline/ethanolamine kinase YrbL-PhoP_reg PF10707.9 ORF85087 - 0.009 15.5 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 PhoP regulatory network protein YrbL RIO1 PF01163.22 ORF85087 - 0.014 15.0 0.0 0.027 14.1 0.0 1.5 1 0 0 1 1 1 0 RIO1 family Kdo PF06293.14 ORF85087 - 0.083 12.2 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pox_ser-thr_kin PF05445.11 ORF85087 - 0.17 10.9 2.6 0.18 10.7 0.8 1.8 1 1 1 2 2 2 0 Poxvirus serine/threonine protein kinase bZIP_1 PF00170.21 ORF83822 - 2e-10 40.6 7.9 5.2e-10 39.3 7.9 1.6 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF83822 - 0.00024 21.1 7.2 0.00073 19.6 7.2 1.9 1 0 0 1 1 1 1 Basic region leucine zipper DNA_alkylation PF08713.11 ORF83822 - 0.00037 20.3 0.0 0.00082 19.2 0.0 1.5 1 0 0 1 1 1 1 DNA alkylation repair enzyme DUF16 PF01519.16 ORF83822 - 0.0058 17.1 2.4 0.011 16.2 2.4 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF16 LCD1 PF09798.9 ORF83822 - 0.0078 14.8 3.3 0.008 14.7 3.3 1.1 1 0 0 1 1 1 1 DNA damage checkpoint protein bZIP_Maf PF03131.17 ORF83822 - 0.0088 16.5 4.9 0.0088 16.5 4.9 1.9 3 0 0 3 3 1 1 bZIP Maf transcription factor Med4 PF10018.9 ORF83822 - 0.021 14.5 3.4 0.033 13.9 3.4 1.4 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 TRAF_BIRC3_bd PF16673.5 ORF83822 - 0.026 14.3 4.7 0.25 11.2 1.6 2.9 2 1 1 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain BORCS6 PF10157.9 ORF83822 - 0.033 14.4 0.0 0.055 13.7 0.0 1.3 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 Lipoprotein_20 PF13942.6 ORF83822 - 0.035 14.0 0.6 0.083 12.8 0.6 1.6 1 0 0 1 1 1 0 YfhG lipoprotein Phage_HK97_TLTM PF06120.11 ORF83822 - 0.036 13.2 3.6 0.064 12.4 3.6 1.4 1 0 0 1 1 1 0 Tail length tape measure protein DUF948 PF06103.11 ORF83822 - 0.043 14.1 0.4 0.12 12.6 0.2 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) ZapB PF06005.12 ORF83822 - 0.048 14.1 1.4 0.048 14.1 1.4 1.9 2 0 0 2 2 1 0 Cell division protein ZapB G-gamma PF00631.22 ORF83822 - 0.062 13.3 0.1 2.6 8.1 0.0 2.6 2 0 0 2 2 2 0 GGL domain BRI3BP PF14965.6 ORF83822 - 0.067 12.7 1.0 0.12 11.9 1.0 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 NBP1 PF08537.10 ORF83822 - 0.097 12.1 7.9 0.099 12.0 5.6 1.9 2 0 0 2 2 2 0 Fungal Nap binding protein NBP1 CALCOCO1 PF07888.11 ORF83822 - 0.12 11.2 5.8 0.16 10.8 5.8 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like FlaC_arch PF05377.11 ORF83822 - 0.13 12.6 2.3 0.24 11.8 0.3 2.4 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) ATF7IP_BD PF16788.5 ORF83822 - 0.16 12.1 6.2 0.26 11.3 6.2 1.3 1 0 0 1 1 1 0 ATF-interacting protein binding domain Sec16 PF12932.7 ORF83822 - 0.18 12.4 1.4 0.19 12.3 0.3 1.7 2 0 0 2 2 1 0 Vesicle coat trafficking protein Sec16 mid-region CLZ PF16526.5 ORF83822 - 0.22 11.9 7.2 0.1 13.0 3.1 2.5 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Prominin PF05478.11 ORF83822 - 0.26 9.2 4.4 0.31 8.9 3.8 1.3 1 1 0 1 1 1 0 Prominin ING PF12998.7 ORF83559 - 1.8e-05 25.2 1.0 1.8e-05 25.2 1.0 2.5 3 0 0 3 3 3 1 Inhibitor of growth proteins N-terminal histone-binding PHD PF00628.29 ORF83559 - 0.00038 20.3 11.2 0.00079 19.3 11.2 1.6 1 0 0 1 1 1 1 PHD-finger DUF489 PF04356.12 ORF83559 - 0.013 15.5 0.1 0.022 14.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF489) Mito_carr PF00153.27 ORF82511 - 9.4e-28 96.0 12.3 1.5e-12 47.3 0.4 3.6 3 1 0 3 3 3 3 Mitochondrial carrier protein HTH_AraC PF00165.23 ORF82511 - 0.19 11.8 1.3 0.4 10.8 1.3 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family Pro_isomerase PF00160.21 ORF8235 - 5.5e-50 169.7 0.1 6.6e-50 169.5 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD U-box PF04564.15 ORF80038 - 3.2e-10 40.0 0.1 1e-09 38.5 0.1 1.8 1 0 0 1 1 1 1 U-box domain ADIP PF11559.8 ORF80038 - 2.5e-05 24.4 15.4 2.5e-05 24.4 15.4 2.0 1 1 1 2 2 2 1 Afadin- and alpha -actinin-Binding TRAF_BIRC3_bd PF16673.5 ORF80038 - 0.0025 17.5 3.1 0.005 16.6 0.7 2.6 2 0 0 2 2 2 1 TNF receptor-associated factor BIRC3 binding domain Jnk-SapK_ap_N PF09744.9 ORF80038 - 0.0026 18.0 10.9 0.0026 18.0 10.9 2.4 2 0 0 2 2 2 1 JNK_SAPK-associated protein-1 ERM PF00769.19 ORF80038 - 0.0027 17.6 4.6 0.0027 17.6 4.6 1.9 2 0 0 2 2 2 1 Ezrin/radixin/moesin family GCFC PF07842.12 ORF80038 - 0.01 15.5 1.7 0.015 14.9 1.7 1.3 1 0 0 1 1 1 0 GC-rich sequence DNA-binding factor-like protein T3SS_NleG PF06416.12 ORF80038 - 0.012 15.5 3.2 0.18 11.7 3.2 2.7 1 1 0 1 1 1 0 Effector protein NleG Tup_N PF08581.10 ORF80038 - 0.02 15.2 17.3 0.041 14.2 6.0 3.4 1 1 1 3 3 3 0 Tup N-terminal Spc7 PF08317.11 ORF80038 - 0.025 13.4 18.3 0.0063 15.4 14.5 1.8 1 1 1 2 2 2 0 Spc7 kinetochore protein SlyX PF04102.12 ORF80038 - 0.045 14.4 1.1 0.045 14.4 1.1 3.0 2 1 1 3 3 3 0 SlyX CENP-Q PF13094.6 ORF80038 - 0.047 13.9 12.0 0.083 13.1 12.0 1.5 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit ZapD PF07072.11 ORF80038 - 0.069 12.9 5.5 0.16 11.7 0.9 2.4 1 1 1 2 2 2 0 Cell division protein ATG16 PF08614.11 ORF80038 - 0.081 13.1 14.1 0.13 12.4 14.0 1.4 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF948 PF06103.11 ORF80038 - 0.11 12.8 4.4 5.6 7.3 4.1 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Syntaxin_2 PF14523.6 ORF80038 - 0.14 12.6 18.6 0.031 14.6 12.2 2.5 3 0 0 3 3 2 0 Syntaxin-like protein DUF641 PF04859.12 ORF80038 - 0.16 12.3 10.6 0.12 12.8 5.1 2.7 2 1 0 2 2 2 0 Plant protein of unknown function (DUF641) YojJ PF10372.9 ORF80038 - 0.16 12.1 5.3 0.4 10.8 0.6 3.0 2 1 1 3 3 2 0 Bacterial membrane-spanning protein N-terminus NEMP PF10225.9 ORF80038 - 0.22 11.2 0.9 0.34 10.5 0.9 1.3 1 0 0 1 1 1 0 NEMP family DUF4407 PF14362.6 ORF80038 - 0.23 10.8 4.1 0.3 10.4 4.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Fez1 PF06818.15 ORF80038 - 0.31 11.5 18.1 0.044 14.2 10.8 2.1 1 1 1 2 2 2 0 Fez1 Baculo_PEP_C PF04513.12 ORF80038 - 0.33 11.0 6.2 0.78 9.8 6.1 1.8 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3450 PF11932.8 ORF80038 - 0.38 10.0 10.2 0.029 13.7 5.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Sipho_Gp157 PF05565.11 ORF80038 - 0.99 9.4 13.3 0.32 11.0 9.4 1.9 1 1 0 2 2 2 0 Siphovirus Gp157 7TMR-HDED PF07697.11 ORF80038 - 1 9.4 9.0 42 4.2 9.0 2.1 1 1 0 1 1 1 0 7TM-HD extracellular CENP-H PF05837.12 ORF80038 - 1.1 9.7 14.7 0.28 11.6 7.7 2.4 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Laminin_II PF06009.12 ORF80038 - 1.3 9.0 11.0 0.4 10.7 7.9 1.7 2 0 0 2 2 2 0 Laminin Domain II TMPIT PF07851.13 ORF80038 - 2.2 7.4 16.3 0.11 11.7 8.9 1.9 2 0 0 2 2 2 0 TMPIT-like protein LMBR1 PF04791.16 ORF80038 - 6.2 5.6 9.8 7.5 5.3 9.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Phage_pRha PF09669.10 ORF80038 - 6.5 7.4 8.0 0.41 11.2 1.1 2.5 2 2 1 3 3 3 0 Phage regulatory protein Rha (Phage_pRha) RPW8 PF05659.11 ORF80038 - 7.4 6.3 13.3 12 5.5 7.2 3.1 1 1 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 DUF1664 PF07889.12 ORF80038 - 7.5 6.6 12.5 5.6 7.0 1.9 2.8 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF493 PF04359.14 ORF79048 - 0.00064 20.3 0.0 0.0011 19.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF493) zf-FLZ PF04570.14 ORF74248 - 0.21 11.1 1.1 1 8.9 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of the FCS-type, C2-C2 SIS_2 PF13580.6 ORF7359 - 1.4e-32 112.6 0.2 3e-32 111.5 0.2 1.6 1 0 0 1 1 1 1 SIS domain SIS PF01380.22 ORF7359 - 1.5e-08 34.6 0.0 3.8e-08 33.2 0.0 1.7 1 0 0 1 1 1 1 SIS domain Antibiotic_NAT PF02522.14 ORF7359 - 0.1 12.4 0.0 0.26 11.0 0.0 1.7 2 1 0 2 2 2 0 Aminoglycoside 3-N-acetyltransferase RimK PF08443.11 ORF7275 - 9.7e-06 25.3 0.0 1.3e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain Baculo_VP1054 PF05789.11 ORF7275 - 0.16 11.1 0.0 0.25 10.5 0.0 1.3 1 0 0 1 1 1 0 Baculovirus VP1054 protein DZR PF12773.7 ORF66105 - 0.00086 19.3 1.4 0.00086 19.3 1.4 2.3 3 0 0 3 3 3 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 ORF66105 - 0.012 15.3 0.7 0.012 15.3 0.7 2.0 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF66105 - 0.018 14.5 1.0 0.066 12.6 1.0 2.1 1 0 0 1 1 1 0 zinc-ribbon domain HypA PF01155.19 ORF66105 - 0.1 12.6 0.6 0.2 11.7 0.6 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Toxin_12 PF07740.12 ORF61469 - 0.048 14.4 2.5 0.048 14.4 2.5 2.5 2 0 0 2 2 2 0 Ion channel inhibitory toxin OMP_b-brl_3 PF14905.6 ORF61301 - 0.038 13.0 0.0 0.052 12.5 0.0 1.1 1 0 0 1 1 1 0 Outer membrane protein beta-barrel family OMP_b-brl_3 PF14905.6 ORF57514 - 0.038 13.0 0.0 0.052 12.5 0.0 1.1 1 0 0 1 1 1 0 Outer membrane protein beta-barrel family A_deaminase PF00962.22 ORF53488 - 7.2e-15 55.1 0.0 9e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase FAM219A PF15260.6 ORF53488 - 0.053 13.9 0.4 5.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Protein family FAM219A Gemini_mov PF01708.16 ORF52577 - 0.095 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Geminivirus putative movement protein Caud_tail_N PF16838.5 ORF5147 - 0.094 13.1 0.2 0.19 12.2 0.2 1.4 1 0 0 1 1 1 0 Caudoviral major tail protein N-terminus zf-RING_2 PF13639.6 ORF51315 - 1e-06 28.9 2.3 1e-06 28.9 2.3 4.5 3 1 1 5 5 5 1 Ring finger domain zf-RING_5 PF14634.6 ORF51315 - 0.00053 19.9 1.7 0.00053 19.9 1.7 4.9 2 1 2 4 4 4 1 zinc-RING finger domain zf-RING_11 PF17123.5 ORF51315 - 0.00072 19.3 2.6 0.00072 19.3 2.6 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF51315 - 0.0039 17.5 2.0 0.0039 17.5 2.0 4.3 3 2 0 3 3 3 1 RING-H2 zinc finger domain zf-MYND PF01753.18 ORF51177 - 0.37 10.9 8.3 2.8 8.1 1.7 2.4 1 1 1 2 2 2 0 MYND finger zf-C6H2 PF15801.5 ORF51177 - 1.2 9.5 9.0 6.9 7.1 1.7 3.0 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding Metallothio_Pro PF02069.16 ORF51177 - 5.4 7.3 7.0 0.67 10.2 0.3 2.4 1 1 1 2 2 2 0 Prokaryotic metallothionein YkuD PF03734.14 ORF42152 - 1.3e-06 28.9 0.3 2.7e-06 27.9 0.2 1.6 1 1 1 2 2 2 1 L,D-transpeptidase catalytic domain Pentapeptide PF00805.22 ORF42063 - 0.041 13.5 0.1 0.13 12.0 0.0 1.9 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) Alpha-amyl_C PF09071.10 ORF42063 - 0.29 11.0 0.1 0.29 11.0 0.1 2.5 3 0 0 3 3 3 0 Alpha-amylase, C terminal Pentapeptide_3 PF13576.6 ORF42063 - 0.68 10.1 3.5 0.36 11.0 0.7 2.0 2 0 0 2 2 2 0 Pentapeptide repeats (9 copies) DUF5078 PF16877.5 ORF36020 - 0.038 14.4 0.0 0.06 13.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5078) CLIP PF12032.8 ORF35500 - 0.15 12.4 0.1 0.5 10.7 0.0 1.9 1 1 0 1 1 1 0 Regulatory CLIP domain of proteinases Glycoamylase PF10091.9 ORF30593 - 0.042 13.4 1.6 0.064 12.8 1.6 1.2 1 0 0 1 1 1 0 Putative glucoamylase G10 PF01125.17 ORF23353 - 7.1e-44 149.1 0.8 1e-43 148.6 0.8 1.2 1 0 0 1 1 1 1 G10 protein Ras PF00071.22 ORF22150 - 1.4e-39 135.3 0.1 1.7e-39 135.0 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF22150 - 4.7e-31 107.5 0.0 8.9e-31 106.6 0.0 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF22150 - 3.5e-15 55.9 0.0 4.9e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF22150 - 3.5e-06 27.0 0.3 0.00082 19.3 0.1 2.9 1 1 1 3 3 3 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF22150 - 6.9e-06 26.1 0.2 2e-05 24.6 0.0 2.0 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_7 PF12775.7 ORF22150 - 5.7e-05 22.7 1.3 0.0001 21.8 1.3 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region G-alpha PF00503.20 ORF22150 - 0.0032 16.7 4.1 0.0049 16.1 4.1 1.4 1 1 0 1 1 1 1 G-protein alpha subunit DAP3 PF10236.9 ORF22150 - 0.0034 16.6 0.0 0.0056 15.9 0.0 1.3 1 0 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 Gtr1_RagA PF04670.12 ORF22150 - 0.0048 16.3 0.3 0.0067 15.8 0.3 1.4 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 ORF22150 - 0.0095 15.4 0.0 0.014 14.8 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 ORF22150 - 0.017 15.5 0.0 0.027 14.9 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain GTP_EFTU PF00009.27 ORF22150 - 0.023 14.2 0.0 0.047 13.2 0.0 1.6 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain NACHT PF05729.12 ORF22150 - 0.049 13.5 0.1 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_5 PF07728.14 ORF22150 - 0.069 13.1 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF22150 - 0.074 13.3 0.0 0.24 11.7 0.0 1.7 2 1 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 ORF22150 - 0.097 12.7 0.1 0.15 12.1 0.1 1.5 1 1 0 1 1 1 0 Dynamin family AAA_24 PF13479.6 ORF22150 - 0.11 12.2 0.2 0.2 11.3 0.1 1.6 1 1 0 1 1 1 0 AAA domain ALMT PF11744.8 ORF19965 - 6.1 5.6 6.7 52 2.5 6.7 2.0 1 1 0 1 1 1 0 Aluminium activated malate transporter HEM4 PF02602.15 ORF17482 - 9.8e-40 136.3 0.0 1.1e-39 136.2 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD GATase_4 PF13230.6 ORF17482 - 0.039 12.9 0.0 0.08 11.8 0.0 1.5 1 0 0 1 1 1 0 Glutamine amidotransferases class-II zf-RING_2 PF13639.6 ORF15626 - 2.9e-11 43.5 11.0 2.9e-11 43.5 11.0 2.4 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF15626 - 1.2e-08 35.1 9.6 1.2e-08 35.1 9.6 2.4 2 1 1 3 3 3 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF15626 - 2.6e-08 33.6 10.8 2.6e-08 33.6 10.8 2.7 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF15626 - 1.6e-06 27.7 4.4 1.6e-06 27.7 4.4 2.7 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 ORF15626 - 2.4e-06 27.3 17.3 1.4e-05 24.8 8.1 2.3 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF15626 - 2.4e-05 24.1 12.4 2.4e-05 24.1 12.4 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF15626 - 8.3e-05 22.5 3.1 8.3e-05 22.5 3.1 3.5 3 0 0 3 3 3 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 ORF15626 - 0.00012 22.1 3.9 0.00012 22.1 3.9 2.0 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 ORF15626 - 0.00014 21.7 10.0 0.00014 21.7 10.0 2.5 2 0 0 2 2 2 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF15626 - 0.00039 20.0 7.2 0.00039 20.0 7.2 2.0 2 1 0 2 2 2 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 ORF15626 - 0.0014 18.5 8.9 0.0014 18.5 8.9 2.4 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zinc-ribbons_6 PF07191.12 ORF15626 - 0.0073 16.3 14.2 0.38 10.8 1.6 2.6 2 0 0 2 2 2 2 zinc-ribbons zf-C3H2C3 PF17122.5 ORF15626 - 0.012 15.6 6.5 0.012 15.6 6.5 2.1 3 0 0 3 3 2 0 Zinc-finger zf-Nse PF11789.8 ORF15626 - 0.099 12.5 8.2 0.097 12.5 6.1 2.1 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit DZR PF12773.7 ORF15626 - 2.4 8.3 14.6 2.2 8.4 2.8 2.6 2 1 0 2 2 2 0 Double zinc ribbon YdjO PF14169.6 ORF15626 - 3.2 7.5 9.7 0.44 10.3 0.2 3.1 3 0 0 3 3 3 0 Cold-inducible protein YdjO zinc_ribbon_16 PF17034.5 ORF15626 - 4.8 7.4 13.4 0.11 12.7 6.1 2.0 2 1 0 2 2 2 0 Zinc-ribbon like family Pkinase PF00069.25 ORF151966 - 2e-51 174.9 0.4 2.3e-51 174.7 0.4 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF151966 - 1.3e-19 70.5 0.1 3.9e-19 69.0 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase APH PF01636.23 ORF151966 - 0.0018 18.3 0.0 0.0034 17.3 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 ORF151966 - 0.0071 15.7 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family PAH PF02671.21 ORF151966 - 0.014 15.6 0.1 0.19 11.9 0.0 2.6 2 1 0 2 2 2 0 Paired amphipathic helix repeat Mqo PF06039.15 ORF149207 - 0.22 10.0 0.0 0.29 9.6 0.0 1.1 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) cNMP_binding PF00027.29 ORF149174 - 0.00013 22.0 0.0 0.00019 21.4 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain YlbD_coat PF14071.6 ORF149174 - 0.25 11.6 7.9 0.22 11.8 5.2 1.9 2 0 0 2 2 2 0 Putative coat protein OMP_b-brl_3 PF14905.6 ORF146183 - 0.038 13.0 0.0 0.052 12.5 0.0 1.1 1 0 0 1 1 1 0 Outer membrane protein beta-barrel family DUF596 PF04591.12 ORF144999 - 0.086 13.0 1.3 0.66 10.2 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function, DUF596 CrgA PF06781.12 ORF144999 - 0.14 12.2 0.2 0.33 11.0 0.2 1.6 1 1 0 1 1 1 0 Cell division protein CrgA CCDC106 PF15794.5 ORF144999 - 0.23 11.1 0.6 0.31 10.7 0.0 1.4 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 106 Penicillinase_R PF03965.16 ORF143975 - 0.021 15.2 0.9 0.046 14.1 0.5 1.8 1 1 0 1 1 1 0 Penicillinase repressor APT PF03440.14 ORF141334 - 0.036 14.0 0.0 0.085 12.8 0.0 1.6 2 0 0 2 2 2 0 Aerolysin/Pertussis toxin (APT) domain Mur_ligase_C PF02875.21 ORF136478 - 2.5e-11 43.7 0.0 6.9e-11 42.3 0.0 1.7 2 0 0 2 2 2 1 Mur ligase family, glutamate ligase domain Mur_ligase_M PF08245.12 ORF136478 - 0.0089 16.0 0.0 0.024 14.7 0.0 1.7 2 0 0 2 2 2 1 Mur ligase middle domain Inositol_P PF00459.25 ORF134026 - 3.8e-49 167.6 0.0 4.7e-49 167.3 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family DNA_pol_delta_4 PF04081.13 ORF132755 - 0.054 13.8 0.9 0.1 12.9 0.9 1.3 1 0 0 1 1 1 0 DNA polymerase delta, subunit 4 FhuF PF06276.12 ORF132755 - 0.12 12.8 0.3 0.3 11.5 0.3 1.7 1 1 0 1 1 1 0 Ferric iron reductase FhuF-like transporter DUF2312 PF10073.9 ORF132755 - 0.14 11.8 5.3 0.61 9.8 0.2 2.8 2 2 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) RHH_1 PF01402.21 ORF132755 - 0.41 10.7 2.9 22 5.2 0.1 2.5 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family p450 PF00067.22 ORF130193 - 2.9e-41 141.7 0.0 3.5e-41 141.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 GDA1_CD39 PF01150.17 ORF128821 - 2.1e-29 102.4 0.0 2.6e-29 102.2 0.0 1.0 1 0 0 1 1 1 1 GDA1/CD39 (nucleoside phosphatase) family MFS_1 PF07690.16 ORF124074 - 2.6e-05 23.3 7.9 9.9e-05 21.4 8.7 1.6 1 1 1 2 2 2 2 Major Facilitator Superfamily ATPase_gene1 PF09527.10 ORF124074 - 0.042 14.0 1.5 0.083 13.1 0.1 2.2 2 0 0 2 2 2 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Reticulon PF02453.17 ORF124074 - 1 9.3 7.7 0.42 10.6 0.8 2.7 2 2 1 3 3 3 0 Reticulon Oxidored_q5_N PF01059.17 ORF124074 - 3.8 7.6 11.3 0.34 11.0 4.1 2.4 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus bZIP_1 PF00170.21 ORF123721 - 2e-10 40.6 7.9 5.2e-10 39.3 7.9 1.6 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 ORF123721 - 0.00024 21.1 7.2 0.00073 19.6 7.2 1.9 1 0 0 1 1 1 1 Basic region leucine zipper DNA_alkylation PF08713.11 ORF123721 - 0.00037 20.3 0.0 0.00082 19.2 0.0 1.5 1 0 0 1 1 1 1 DNA alkylation repair enzyme DUF16 PF01519.16 ORF123721 - 0.0058 17.1 2.4 0.011 16.2 2.4 1.6 1 0 0 1 1 1 1 Protein of unknown function DUF16 LCD1 PF09798.9 ORF123721 - 0.0078 14.8 3.3 0.008 14.7 3.3 1.1 1 0 0 1 1 1 1 DNA damage checkpoint protein bZIP_Maf PF03131.17 ORF123721 - 0.0088 16.5 4.9 0.0088 16.5 4.9 1.9 3 0 0 3 3 1 1 bZIP Maf transcription factor Med4 PF10018.9 ORF123721 - 0.021 14.5 3.4 0.033 13.9 3.4 1.4 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 TRAF_BIRC3_bd PF16673.5 ORF123721 - 0.026 14.3 4.7 0.25 11.2 1.6 2.9 2 1 1 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain BORCS6 PF10157.9 ORF123721 - 0.033 14.4 0.0 0.055 13.7 0.0 1.3 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 6 Lipoprotein_20 PF13942.6 ORF123721 - 0.035 14.0 0.6 0.083 12.8 0.6 1.6 1 0 0 1 1 1 0 YfhG lipoprotein Phage_HK97_TLTM PF06120.11 ORF123721 - 0.036 13.2 3.6 0.064 12.4 3.6 1.4 1 0 0 1 1 1 0 Tail length tape measure protein DUF948 PF06103.11 ORF123721 - 0.043 14.1 0.4 0.12 12.6 0.2 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) ZapB PF06005.12 ORF123721 - 0.048 14.1 1.4 0.048 14.1 1.4 1.9 2 0 0 2 2 1 0 Cell division protein ZapB G-gamma PF00631.22 ORF123721 - 0.062 13.3 0.1 2.6 8.1 0.0 2.6 2 0 0 2 2 2 0 GGL domain BRI3BP PF14965.6 ORF123721 - 0.067 12.7 1.0 0.12 11.9 1.0 1.4 1 0 0 1 1 1 0 Negative regulator of p53/TP53 NBP1 PF08537.10 ORF123721 - 0.097 12.1 7.9 0.099 12.0 5.6 1.9 2 0 0 2 2 2 0 Fungal Nap binding protein NBP1 CALCOCO1 PF07888.11 ORF123721 - 0.12 11.2 5.8 0.16 10.8 5.8 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like FlaC_arch PF05377.11 ORF123721 - 0.13 12.6 2.3 0.24 11.8 0.3 2.4 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) ATF7IP_BD PF16788.5 ORF123721 - 0.16 12.1 6.2 0.26 11.3 6.2 1.3 1 0 0 1 1 1 0 ATF-interacting protein binding domain Sec16 PF12932.7 ORF123721 - 0.18 12.4 1.4 0.19 12.3 0.3 1.7 2 0 0 2 2 1 0 Vesicle coat trafficking protein Sec16 mid-region CLZ PF16526.5 ORF123721 - 0.22 11.9 7.2 0.1 13.0 3.1 2.5 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Prominin PF05478.11 ORF123721 - 0.26 9.2 4.4 0.31 8.9 3.8 1.3 1 1 0 1 1 1 0 Prominin A_deaminase PF00962.22 ORF122952 - 7.2e-15 55.1 0.0 9e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase FAM219A PF15260.6 ORF122952 - 0.053 13.9 0.4 5.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Protein family FAM219A CAF1 PF04857.20 ORF122474 - 2.6e-29 102.4 0.1 3.4e-24 85.6 0.0 2.2 1 1 1 2 2 2 2 CAF1 family ribonuclease DUF913 PF06025.12 ORF121225 - 0.026 13.5 0.1 0.035 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) FAD_binding_3 PF01494.19 ORF120270 - 3.2e-09 36.5 0.0 4.2e-09 36.1 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF120270 - 1.1e-06 28.2 0.0 1.4e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 ORF120270 - 0.00095 18.3 1.7 0.026 13.6 0.6 2.1 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 ORF120270 - 0.0079 16.4 0.3 0.016 15.4 0.3 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 ORF120270 - 0.01 15.1 0.1 0.028 13.7 0.1 1.6 2 0 0 2 2 2 0 Thi4 family HI0933_like PF03486.14 ORF120270 - 0.019 13.7 1.1 0.03 13.0 0.5 1.6 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox PF00070.27 ORF120270 - 0.023 15.2 0.1 2.7 8.6 0.1 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF120270 - 0.034 13.4 0.0 0.39 9.9 0.1 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF120270 - 0.22 10.6 0.1 0.25 10.4 0.1 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A Miff PF05644.11 ORF11860 - 0.0095 15.6 1.1 0.0095 15.6 1.1 1.7 2 0 0 2 2 2 1 Mitochondrial and peroxisomal fission factor Mff PspB PF06667.12 ORF11860 - 0.012 15.6 1.1 0.012 15.6 1.1 2.2 2 0 0 2 2 2 0 Phage shock protein B BLOC1_2 PF10046.9 ORF11860 - 0.028 14.7 0.8 0.057 13.7 0.4 1.7 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TSC22 PF01166.18 ORF11860 - 0.055 13.8 11.4 0.27 11.6 0.6 3.3 2 1 1 3 3 3 0 TSC-22/dip/bun family KASH_CCD PF14662.6 ORF11860 - 0.094 12.5 5.6 3 7.6 1.7 2.1 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Shugoshin_N PF07558.11 ORF11860 - 0.2 11.5 3.4 3 7.8 0.4 3.1 3 0 0 3 3 3 0 Shugoshin N-terminal coiled-coil region TMF_DNA_bd PF12329.8 ORF11860 - 0.34 10.9 7.4 2.6 8.1 1.8 2.5 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding YabA PF06156.13 ORF11860 - 0.87 10.3 5.2 0.67 10.6 0.1 2.3 2 1 0 2 2 2 0 Initiation control protein YabA Rootletin PF15035.6 ORF11860 - 1 9.4 9.1 0.13 12.2 1.2 2.1 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion DivIC PF04977.15 ORF11860 - 1.2 9.0 4.8 5.7 6.8 0.1 2.5 2 1 0 2 2 2 0 Septum formation initiator ZapB PF06005.12 ORF11860 - 1.5 9.3 8.0 6.5 7.3 2.1 2.3 2 0 0 2 2 2 0 Cell division protein ZapB GBP PF02263.19 ORF117323 - 6.5e-57 192.8 0.0 7.3e-57 192.6 0.0 1.0 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain MMR_HSR1 PF01926.23 ORF117323 - 0.015 15.4 0.0 0.023 14.8 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase Ribosomal_L3 PF00297.22 ORF115874 - 2e-13 50.1 7.9 3e-12 46.2 6.3 2.1 1 1 1 2 2 2 2 Ribosomal protein L3 Gemini_mov PF01708.16 ORF115708 - 0.18 11.6 0.6 0.36 10.6 0.6 1.4 1 0 0 1 1 1 0 Geminivirus putative movement protein Sugar_tr PF00083.24 ORF115585 - 5.4e-22 78.3 20.0 6.1e-22 78.1 20.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF115585 - 0.00025 20.1 2.6 0.00025 20.1 2.6 2.2 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF115585 - 0.28 9.7 12.7 0.043 12.4 7.1 2.0 1 1 0 2 2 2 0 MFS/sugar transport protein YibE_F PF07907.11 ORF115585 - 0.73 9.3 12.9 0.069 12.6 6.8 2.0 2 0 0 2 2 2 0 YibE/F-like protein DUF3671 PF12420.8 ORF115585 - 0.92 9.6 8.2 5.9 7.0 5.1 2.4 2 0 0 2 2 2 0 Protein of unknown function RNase_T PF00929.24 ORF112878 - 2.1e-42 145.5 0.4 4.4e-42 144.4 0.1 1.6 2 0 0 2 2 2 1 Exonuclease DUF5051 PF16473.5 ORF112878 - 1.7e-06 28.2 0.2 7.7e-06 26.0 0.0 2.1 2 1 0 2 2 2 1 3' exoribonuclease, RNase T-like DNA_pol_A_exo1 PF01612.20 ORF112878 - 0.0034 17.1 0.1 0.08 12.7 0.0 2.5 2 1 0 2 2 2 1 3'-5' exonuclease vATP-synt_AC39 PF01992.16 ORF112878 - 0.1 12.1 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 ATP synthase (C/AC39) subunit Aida_N PF08910.10 ORF10934 - 0.097 13.1 0.6 5 7.6 0.0 2.7 2 1 0 2 2 2 0 Aida N-terminus zf-AN1 PF01428.16 ORF10846 - 1e-15 57.6 27.1 6.3e-10 39.0 11.5 4.2 5 0 0 5 5 5 2 AN1-like Zinc finger zf-Di19 PF05605.12 ORF10846 - 3.5e-05 24.0 23.1 0.0002 21.6 0.2 4.3 4 1 0 4 4 4 2 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_4 PF13894.6 ORF10846 - 9.4e-05 22.9 1.8 0.027 15.3 0.3 6.2 7 0 0 7 7 7 2 C2H2-type zinc finger FYVE PF01363.21 ORF10846 - 0.00059 19.9 20.2 1.2 9.4 0.0 4.3 4 0 0 4 4 4 2 FYVE zinc finger zf-C2HC_2 PF13913.6 ORF10846 - 0.00067 19.5 0.1 0.00067 19.5 0.1 4.4 5 0 0 5 5 4 1 zinc-finger of a C2HC-type zf-C2H2 PF00096.26 ORF10846 - 0.0018 18.6 1.5 0.091 13.3 0.2 6.2 6 2 0 6 6 5 2 Zinc finger, C2H2 type zf-C2H2_9 PF16293.5 ORF10846 - 0.0019 18.0 4.0 1.1 9.2 0.1 3.4 3 0 0 3 3 3 1 C2H2 type zinc-finger (1 copy) UBZ_FAAP20 PF15750.5 ORF10846 - 0.13 12.2 2.4 13 5.8 0.1 3.8 3 0 0 3 3 3 0 Ubiquitin-binding zinc-finger Rad50_zn_hook PF04423.14 ORF10846 - 0.15 11.9 8.4 0.39 10.6 0.0 3.1 4 0 0 4 4 4 0 Rad50 zinc hook motif zf_ZIC PF18366.1 ORF10846 - 0.16 12.1 0.2 0.16 12.1 0.2 3.5 3 1 1 4 4 4 0 Zic proteins zinc finger domain Zn-C2H2_12 PF18112.1 ORF10846 - 0.4 11.2 25.5 0.16 12.5 1.7 4.9 5 1 0 5 5 4 0 Autophagy receptor zinc finger-C2H2 domain zf-C2H2_3 PF13878.6 ORF10846 - 0.65 9.9 0.1 0.65 9.9 0.1 4.7 5 1 1 6 6 6 0 zinc-finger of acetyl-transferase ESCO zf-FPG_IleRS PF06827.14 ORF10846 - 0.82 9.6 0.0 0.82 9.6 0.0 4.3 5 0 0 5 5 4 0 Zinc finger found in FPG and IleRS RNF220 PF15926.5 ORF10846 - 1 8.9 9.5 0.5 9.9 0.2 3.0 3 0 0 3 3 3 0 E3 ubiquitin-protein ligase RNF220 zinc_ribbon_9 PF14369.6 ORF10846 - 3.4 8.0 15.1 5.3 7.4 0.3 4.4 4 0 0 4 4 4 0 zinc-ribbon zf-TFIIB PF13453.6 ORF10846 - 9.2 5.7 15.5 20 4.6 0.1 5.0 5 1 0 5 5 5 0 Transcription factor zinc-finger DZR PF12773.7 ORF107725 - 0.00086 19.3 1.4 0.00086 19.3 1.4 2.3 3 0 0 3 3 3 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 ORF107725 - 0.012 15.3 0.7 0.012 15.3 0.7 2.0 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 ORF107725 - 0.018 14.5 1.0 0.066 12.6 1.0 2.1 1 0 0 1 1 1 0 zinc-ribbon domain HypA PF01155.19 ORF107725 - 0.1 12.6 0.6 0.2 11.7 0.6 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Wtap PF17098.5 ORF104085 - 1.2e-16 61.1 15.0 1.2e-16 61.1 15.0 2.1 1 1 1 2 2 2 1 WTAP/Mum2p family KNOX2 PF03791.13 ORF104085 - 0.047 13.2 0.3 0.11 12.0 0.3 1.6 1 0 0 1 1 1 0 KNOX2 domain DUF2730 PF10805.8 ORF104085 - 3.1 7.9 6.7 4.7 7.3 1.3 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) Spc7 PF08317.11 ORF104085 - 4.4 6.1 20.4 7 5.4 20.4 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein UPF0242 PF06785.11 ORF104085 - 4.7 7.3 15.4 8.1 6.5 15.4 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Cytochrom_C552 PF02335.15 ORF103910 - 2.3e-95 320.1 11.3 2.8e-95 319.8 11.3 1.0 1 0 0 1 1 1 1 Cytochrome c552 Cytochrome_C7 PF14522.6 ORF103910 - 0.0014 18.6 17.2 0.0083 16.1 4.8 2.1 1 1 1 2 2 2 2 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 ORF103910 - 0.0016 18.9 3.4 0.0033 17.9 3.4 1.6 1 0 0 1 1 1 1 Cytochrome c3 Paired_CXXCH_1 PF09699.10 ORF103910 - 0.0065 16.2 2.2 0.024 14.4 2.3 1.9 1 1 0 1 1 1 1 Doubled CXXCH motif (Paired_CXXCH_1) zf-trcl PF13451.6 ORF103910 - 0.0069 16.3 0.5 0.014 15.3 0.5 1.5 1 0 0 1 1 1 1 Probable zinc-ribbon domain Cytochrome_CBB3 PF13442.6 ORF103910 - 0.0072 16.6 2.8 0.12 12.7 0.3 2.6 1 1 1 2 2 2 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_NNT PF03264.14 ORF103910 - 0.014 15.1 11.3 0.08 12.6 0.5 2.8 2 1 1 3 3 3 0 NapC/NirT cytochrome c family, N-terminal region PSCyt1 PF07635.11 ORF103910 - 0.024 15.2 0.4 3.8 8.2 0.1 2.8 2 0 0 2 2 2 0 Planctomycete cytochrome C Dehyd-heme_bind PF09098.10 ORF103910 - 0.054 13.1 0.9 0.13 11.8 0.2 1.9 1 1 0 1 1 1 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding CCP_MauG PF03150.14 ORF103910 - 0.082 13.5 5.0 5.8 7.6 5.0 2.4 1 1 0 1 1 1 0 Di-haem cytochrome c peroxidase Cytochrom_CIII PF02085.16 ORF103910 - 0.12 12.8 7.0 1.5 9.2 4.4 2.4 1 1 2 3 3 3 0 Class III cytochrome C family DUF1924 PF09086.11 ORF103910 - 0.32 11.4 4.1 2.9 8.3 0.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF1924) Cytochrome_C554 PF13435.6 ORF103910 - 1.1 10.3 8.8 1.2 10.1 3.7 2.8 2 1 2 4 4 4 0 Cytochrome c554 and c-prime UBA_4 PF14555.6 ORF101719 - 1.3e-05 25.0 0.0 5.1e-05 23.0 0.0 1.9 2 0 0 2 2 2 1 UBA-like domain PDZ_6 PF17820.1 NODE_29640_length_733_cov_208.445559_g23391_i0reverse_frame_1 - 9.5e-13 47.8 0.0 1.9e-05 24.4 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 NODE_29640_length_733_cov_208.445559_g23391_i0reverse_frame_1 - 5.2e-09 36.3 0.2 2.7e-06 27.6 0.0 2.2 1 1 1 2 2 2 2 PDZ domain GRASP55_65 PF04495.14 NODE_29640_length_733_cov_208.445559_g23391_i0reverse_frame_1 - 1.9e-07 31.5 0.0 2.7e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain PDZ PF00595.24 NODE_29640_length_733_cov_208.445559_g23391_i0reverse_frame_1 - 1.1e-06 28.9 0.1 0.0087 16.4 0.0 2.5 2 0 0 2 2 2 2 PDZ domain Casein PF00363.18 NODE_29587_length_734_cov_375.762518_g23351_i0reverse_frame_1 - 0.033 14.5 0.0 0.08 13.3 0.0 1.6 2 0 0 2 2 2 0 Casein Ribonuc_red_sm PF00268.21 NODE_29562_length_735_cov_2.801429_g23339_i0reverse_frame_1 - 1.5e-37 129.6 0.6 1.7e-37 129.4 0.6 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain DUF1958 PF09211.10 NODE_29562_length_735_cov_2.801429_g23339_i0reverse_frame_1 - 0.099 13.0 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1958) Dsh_C PF12316.8 NODE_29546_length_735_cov_143.941429_g23325_i0reverse_frame_1 - 0.56 10.6 24.3 0.038 14.4 6.7 2.1 2 0 0 2 2 2 0 Segment polarity protein dishevelled (Dsh) C terminal DUF2070 PF09843.9 NODE_29546_length_735_cov_143.941429_g23325_i0forward_frame_1 - 8.2 4.6 29.2 11 4.2 29.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) FCH PF00611.23 NODE_29543_length_735_cov_154.184286_g23323_i0forward_frame_1 - 0.14 12.4 0.6 31 4.9 0.0 3.4 3 1 0 3 3 3 0 Fes/CIP4, and EFC/F-BAR homology domain PSII_Pbs31 PF18240.1 NODE_29517_length_735_cov_32451.928571_g23304_i0forward_frame_1 - 3.9e-07 30.4 2.3 9.2e-07 29.2 0.0 2.5 2 1 0 2 2 2 1 Photosystem II Psb31 protein CytB6-F_Fe-S PF08802.10 NODE_29517_length_735_cov_32451.928571_g23304_i0forward_frame_1 - 0.42 10.7 4.9 11 6.2 1.0 2.3 1 1 1 2 2 2 0 Cytochrome B6-F complex Fe-S subunit GCS2 PF04107.13 NODE_29461_length_737_cov_6.437322_g23257_i0reverse_frame_2 - 0.0074 15.7 0.0 0.0099 15.3 0.0 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) MLANA PF14991.6 NODE_29451_length_737_cov_132.267806_g23248_i0reverse_frame_2 - 2.6 8.3 8.1 0.47 10.7 0.6 2.4 2 0 0 2 2 2 0 Protein melan-A GPS PF01825.21 NODE_29440_length_737_cov_226.542735_g23238_i0reverse_frame_3 - 0.078 13.5 0.4 7.7 7.1 0.1 2.7 2 1 0 2 2 2 0 GPCR proteolysis site, GPS, motif Phage_ABA_S PF18066.1 NODE_29406_length_738_cov_92.822191_g23215_i0reverse_frame_2 - 0.074 13.7 0.0 0.22 12.2 0.0 1.8 1 1 0 1 1 1 0 Phage ABA sandwich domain YMF19 PF02326.15 ORF99215 - 0.087 13.6 0.2 0.087 13.6 0.2 2.9 2 2 1 3 3 3 0 Plant ATP synthase F0 Ctr PF04145.15 ORF99215 - 0.42 11.2 2.7 1.7 9.3 2.7 2.0 1 1 0 1 1 1 0 Ctr copper transporter family DUF1759 PF03564.15 ORF98359 - 0.063 13.2 0.5 0.063 13.2 0.5 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1759) DUF3810 PF12725.7 ORF98359 - 0.13 11.5 13.4 0.24 10.7 4.4 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF3810) DUF1664 PF07889.12 ORF98359 - 2.1 8.4 22.2 6.2 6.9 2.6 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) HEPN_MAE_28990 PF18737.1 ORF98359 - 2.5 8.0 15.5 0.047 13.6 6.1 2.3 1 1 1 2 2 2 0 MAE_28990/MAE_18760-like HEPN Spc7 PF08317.11 ORF98359 - 6.2 5.6 33.8 0.13 11.1 4.3 2.4 1 1 2 3 3 3 0 Spc7 kinetochore protein DUF4407 PF14362.6 ORF98359 - 7.8 5.8 16.3 15 4.9 15.7 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Ferric_reduct PF01794.19 ORF98005 - 3.9 7.6 12.0 0.41 10.8 6.7 2.1 2 1 0 2 2 2 0 Ferric reductase like transmembrane component ANAPC4_WD40 PF12894.7 ORF98000 - 1e-06 28.9 0.0 0.042 14.2 0.0 4.0 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF98000 - 0.033 15.1 0.0 89 4.2 0.0 3.7 3 0 0 3 3 3 0 WD domain, G-beta repeat VID27 PF08553.10 ORF98000 - 0.16 11.0 0.0 0.44 9.5 0.0 1.7 2 1 1 3 3 3 0 VID27 C-terminal WD40-like domain Lip_prot_lig_C PF10437.9 ORF97773 - 0.0038 17.2 0.0 0.0081 16.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus PsbI PF02532.14 ORF96498 - 0.011 15.6 4.6 1.6 8.7 1.7 2.5 2 0 0 2 2 2 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) PufQ PF05398.11 ORF96498 - 0.78 9.9 2.8 60 3.9 0.1 3.2 3 0 0 3 3 3 0 PufQ cytochrome subunit LRR_8 PF13855.6 ORF9302 - 4.5e-15 55.1 12.3 6.9e-08 32.1 2.5 3.5 1 1 1 3 3 3 3 Leucine rich repeat LRR_4 PF12799.7 ORF9302 - 1e-12 48.0 14.5 1.1e-06 28.9 2.3 3.4 2 1 1 3 3 3 3 Leucine Rich repeats (2 copies) LRR_5 PF13306.6 ORF9302 - 1.1e-05 25.4 7.6 0.0039 17.1 1.6 2.2 1 1 1 2 2 2 2 BspA type Leucine rich repeat region (6 copies) LRR_1 PF00560.33 ORF9302 - 4.1e-05 23.5 17.2 1.1 10.0 1.7 5.4 5 0 0 5 5 5 3 Leucine Rich Repeat LRR_9 PF14580.6 ORF9302 - 0.16 11.5 6.8 0.33 10.4 0.7 2.2 1 1 1 2 2 2 0 Leucine-rich repeat LRR_6 PF13516.6 ORF9302 - 0.86 9.8 17.4 3.7 7.8 0.1 4.9 5 0 0 5 5 5 0 Leucine Rich repeat LRR_4 PF12799.7 ORF92344 - 0.12 12.8 2.9 0.45 11.0 2.9 2.1 1 0 0 1 1 1 0 Leucine Rich repeats (2 copies) Thiolase_C PF02803.18 ORF92103 - 3.7e-54 181.6 1.4 6.4e-54 180.8 1.4 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain Thiolase_N PF00108.23 ORF92103 - 7.7e-47 159.8 1.7 1.1e-46 159.3 1.7 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain ACP_syn_III_C PF08541.10 ORF92103 - 0.042 14.0 0.3 0.13 12.5 0.3 1.8 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Ketoacyl-synt_C PF02801.22 ORF92103 - 0.045 13.8 2.2 2.9 7.9 0.6 3.4 2 1 0 2 2 2 0 Beta-ketoacyl synthase, C-terminal domain TPMT PF05724.11 ORF90926 - 4.8e-14 52.6 0.0 6.4e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) SPOC PF07744.13 ORF90926 - 0.023 14.6 0.0 0.029 14.3 0.0 1.3 1 1 0 1 1 1 0 SPOC domain Methyltransf_25 PF13649.6 ORF90926 - 0.13 13.0 0.0 0.26 12.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain EGF_CA PF07645.15 ORF90421 - 0.44 10.8 3.4 0.4 10.9 0.5 2.5 2 0 0 2 2 2 0 Calcium-binding EGF domain DHHC PF01529.20 ORF87326 - 3.1e-27 95.3 11.8 3.1e-27 95.3 11.8 3.0 2 1 1 3 3 3 2 DHHC palmitoyltransferase EMP70 PF02990.16 ORF85954 - 0.0011 17.7 0.1 0.0012 17.6 0.1 1.1 1 0 0 1 1 1 1 Endomembrane protein 70 DUF1673 PF07895.11 ORF85954 - 0.061 13.0 8.1 0.085 12.6 8.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) B12D PF06522.11 ORF85954 - 0.1 12.4 0.0 0.1 12.4 0.0 2.1 2 0 0 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit m04gp34like PF12216.8 ORF85954 - 0.14 11.7 0.9 0.23 11.0 0.9 1.3 1 0 0 1 1 1 0 Immune evasion protein SLAC1 PF03595.17 ORF85954 - 0.17 11.1 5.3 0.37 10.0 5.5 1.4 1 1 0 1 1 1 0 Voltage-dependent anion channel OPT PF03169.15 ORF85954 - 0.32 9.6 4.9 0.42 9.2 4.9 1.1 1 0 0 1 1 1 0 OPT oligopeptide transporter protein TMEM208_SND2 PF05620.11 ORF85954 - 2 8.2 5.3 0.73 9.6 0.3 2.1 1 1 1 2 2 2 0 SRP-independent targeting protein 2/TMEM208 DUF5090 PF17009.5 ORF85954 - 3.9 7.4 10.6 6.1 6.8 10.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) DUF4485 PF14846.6 ORF85467 - 0.15 12.1 9.3 0.45 10.6 1.4 3.4 4 0 0 4 4 4 0 Domain of unknown function (DUF4485) cNMP_binding PF00027.29 ORF84671 - 2.7e-05 24.1 0.0 4.3e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Com_YlbF PF06133.11 ORF84671 - 0.022 15.4 7.7 0.062 13.9 7.7 1.7 1 0 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA LYRIC PF15686.5 ORF84671 - 0.052 13.1 3.7 0.066 12.8 3.7 1.1 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family DUF4441 PF14536.6 ORF84671 - 0.29 11.3 7.3 0.66 10.2 7.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) EthD PF07110.11 ORF84461 - 0.011 16.9 0.0 0.02 16.0 0.0 1.5 1 0 0 1 1 1 0 EthD domain LemA PF04011.12 ORF81857 - 0.074 12.9 0.5 0.11 12.3 0.5 1.3 1 0 0 1 1 1 0 LemA family BT1 PF03092.16 ORF81761 - 1.2e-21 76.6 8.4 1.4e-21 76.4 8.4 1.0 1 0 0 1 1 1 1 BT1 family MFS_1 PF07690.16 ORF81761 - 0.00058 18.9 10.3 0.0021 17.1 10.4 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily ATG22 PF11700.8 ORF81761 - 0.00067 18.4 13.0 0.00084 18.1 13.0 1.1 1 0 0 1 1 1 1 Vacuole effluxer Atg22 like DUF1772 PF08592.11 ORF81761 - 0.33 11.3 0.0 0.33 11.3 0.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF1772) EamA PF00892.20 ORF81761 - 5.7 7.1 16.2 0.056 13.6 5.4 2.4 1 1 0 2 2 2 0 EamA-like transporter family NIF PF03031.18 ORF80139 - 6.4e-54 182.0 0.8 1e-53 181.3 0.8 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Acid_phosphat_B PF03767.14 ORF80139 - 0.089 12.4 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 HAD superfamily, subfamily IIIB (Acid phosphatase) FSH1 PF03959.13 ORF7990 - 5.9e-26 91.4 0.0 7.6e-26 91.1 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) SUR7 PF06687.12 ORF71097 - 0.49 10.0 9.4 0.29 10.7 4.3 2.3 2 1 0 2 2 2 0 SUR7/PalI family DUF3043 PF11241.8 ORF71097 - 1.9 8.5 3.2 22 5.1 0.2 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3043) YMF19 PF02326.15 ORF69504 - 0.087 13.6 0.2 0.087 13.6 0.2 2.9 2 2 1 3 3 3 0 Plant ATP synthase F0 Ctr PF04145.15 ORF69504 - 0.42 11.2 2.7 1.7 9.3 2.7 2.0 1 1 0 1 1 1 0 Ctr copper transporter family PDGF PF00341.17 ORF67990 - 8.3 6.8 8.7 0.32 11.3 0.9 2.3 1 1 1 2 2 2 0 PDGF/VEGF domain Hydrolase_3 PF08282.12 ORF66777 - 3.6e-12 46.6 0.0 9.3e-11 41.9 0.0 2.1 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 ORF66777 - 0.0027 17.8 0.6 0.023 14.8 0.0 2.4 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF66777 - 0.0052 17.1 0.0 0.051 13.9 0.0 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 ORF66777 - 0.019 14.5 0.0 0.19 11.2 0.0 2.0 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase CHAT PF12770.7 ORF66708 - 1.6e-10 40.9 0.0 2.1e-10 40.5 0.0 1.3 1 0 0 1 1 1 1 CHAT domain Fe_dep_repr_C PF02742.15 ORF66708 - 0.0075 16.3 0.0 0.017 15.2 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Peptidase_C25 PF01364.18 ORF66708 - 0.14 11.3 0.0 0.15 11.2 0.0 1.3 1 0 0 1 1 1 0 Peptidase family C25 Proteasome PF00227.26 ORF66529 - 1e-54 184.9 0.1 1.4e-54 184.5 0.1 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF66529 - 1.2e-13 50.4 0.1 1.9e-13 49.8 0.1 1.3 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature IATP PF04568.12 ORF66529 - 0.054 13.9 0.1 0.13 12.7 0.1 1.6 1 0 0 1 1 1 0 Mitochondrial ATPase inhibitor, IATP FGGY_C PF02782.16 ORF66107 - 1.2e-28 100.2 1.0 1.7e-28 99.7 1.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain XPC-binding PF09280.11 ORF66107 - 0.0048 16.6 0.2 0.012 15.3 0.2 1.6 1 0 0 1 1 1 1 XPC-binding domain HTH_Tnp_Tc3_2 PF01498.18 ORF63985 - 8.4e-08 32.3 0.8 2.4e-07 30.9 0.8 1.8 1 0 0 1 1 1 1 Transposase HTH_38 PF13936.6 ORF63985 - 5.3e-07 29.3 0.6 3.2e-06 26.8 0.1 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 ORF63985 - 0.0012 18.7 2.1 0.019 14.9 0.0 2.8 3 0 0 3 3 3 1 MarR family DUF1400 PF07176.11 ORF63985 - 0.0054 17.0 0.9 0.0098 16.2 0.9 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1400) 2OG-Fe_Oxy_2 PF10014.9 ORF63985 - 0.044 13.6 0.1 2.5 7.9 0.0 2.1 2 0 0 2 2 2 0 2OG-Fe dioxygenase Sigma70_r1_2 PF00140.20 ORF63985 - 0.082 12.9 0.2 4.5 7.4 0.0 2.5 2 0 0 2 2 2 0 Sigma-70 factor, region 1.2 HTH_32 PF13565.6 ORF63985 - 1.1 9.9 5.6 11 6.7 1.8 3.5 1 1 1 2 2 2 0 Homeodomain-like domain DUF334 PF03904.13 ORF61455 - 0.025 14.1 8.4 0.026 14.1 7.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF334) PFL-like PF02901.15 ORF61455 - 0.026 13.2 1.4 0.03 13.0 1.4 1.1 1 0 0 1 1 1 0 Pyruvate formate lyase-like Pkinase PF00069.25 ORF58005 - 2.3e-43 148.5 1.4 2.7e-43 148.2 0.9 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF58005 - 1.7e-28 99.6 0.1 3e-28 98.8 0.1 1.3 1 1 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 ORF58005 - 4.2e-08 32.5 0.3 6.3e-08 32.0 0.3 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF58005 - 0.0022 16.8 0.3 0.0031 16.4 0.3 1.2 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 ORF58005 - 0.014 15.0 0.6 0.031 13.9 0.3 1.7 1 1 0 1 1 1 0 RIO1 family APH PF01636.23 ORF58005 - 0.021 14.7 0.0 0.046 13.6 0.0 1.4 1 1 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 ORF58005 - 0.029 13.7 0.1 0.038 13.4 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 ORF58005 - 0.052 13.2 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 ORF58005 - 0.14 11.5 0.0 2.1 7.6 0.0 2.0 2 0 0 2 2 2 0 Kinase-like ABC1 PF03109.16 ORF58005 - 0.14 12.3 0.2 0.38 10.9 0.0 1.8 2 0 0 2 2 2 0 ABC1 family Aminotran_1_2 PF00155.21 ORF56169 - 5.3e-50 170.6 0.0 5.9e-50 170.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 ORF56169 - 0.0069 15.4 0.0 0.011 14.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Alliinase_C PF04864.13 ORF56169 - 0.027 13.4 0.0 0.04 12.8 0.0 1.2 1 0 0 1 1 1 0 Allinase ORF11CD3 PF10549.9 ORF53856 - 0.038 14.1 0.1 0.083 13.0 0.1 1.5 1 0 0 1 1 1 0 ORF11CD3 domain Methyltransf_23 PF13489.6 ORF53752 - 0.0063 16.4 0.0 0.0081 16.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF53752 - 0.022 15.4 0.0 0.047 14.3 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain SET_assoc PF11767.8 ORF53752 - 0.034 13.8 0.0 0.074 12.7 0.0 1.5 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated N2227 PF07942.12 ORF53752 - 0.22 10.7 0.0 0.37 9.9 0.0 1.3 1 0 0 1 1 1 0 N2227-like protein DUF4118 PF13493.6 ORF50076 - 0.42 10.4 7.3 0.048 13.5 2.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4118) DUF2070 PF09843.9 ORF50076 - 9.9 4.3 17.8 0.022 13.1 4.2 1.9 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) Lig_chan PF00060.26 ORF46803 - 3.1e-05 23.9 0.0 3.7e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Ligand-gated ion channel ASF1_hist_chap PF04729.13 ORF46744 - 5e-49 166.2 0.1 7.8e-49 165.6 0.1 1.3 1 0 0 1 1 1 1 ASF1 like histone chaperone Nup214_FG PF18617.1 ORF46744 - 0.031 14.8 0.8 0.061 13.9 0.8 1.4 1 0 0 1 1 1 0 Nucleoporin Nup214 phenylalanine-glycine (FG) domain Voldacs PF03517.13 ORF45649 - 1.5e-16 60.7 5.4 1.5e-16 60.7 5.4 2.6 2 1 1 3 3 3 1 Regulator of volume decrease after cellular swelling Prolamin_like PF05617.11 ORF4365 - 0.4 10.9 4.2 6 7.1 0.2 2.9 2 1 1 3 3 3 0 Prolamin-like NIF PF03031.18 ORF43365 - 5.6e-08 32.7 4.1 1.3e-06 28.3 0.4 2.3 2 0 0 2 2 2 2 NLI interacting factor-like phosphatase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks86.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks86.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks86.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks86.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:16 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Nepo_coat PF03391.15 ORF38176 - 0.062 12.8 1.0 0.63 9.5 0.3 2.1 2 0 0 2 2 2 0 Nepovirus coat protein, central domain Methyltransf_11 PF08241.12 ORF37818 - 8.6e-16 58.4 0.0 1.8e-15 57.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF37818 - 1.2e-14 54.8 0.1 4.9e-14 52.8 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF37818 - 7e-14 51.9 0.1 9.5e-14 51.4 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF37818 - 9.9e-08 31.6 0.1 1.3e-07 31.2 0.1 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 ORF37818 - 6.8e-06 26.0 0.0 1.6e-05 24.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF37818 - 8.7e-06 26.4 0.0 2e-05 25.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 ORF37818 - 3.9e-05 23.4 0.0 5.5e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) MetW PF07021.12 ORF37818 - 0.012 15.2 0.1 0.034 13.8 0.0 1.7 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.15 ORF37818 - 0.021 14.7 0.3 0.14 11.9 0.3 2.0 1 1 0 1 1 1 0 Hypothetical methyltransferase Post_transc_reg PF13797.6 ORF37818 - 0.027 14.3 0.1 0.027 14.3 0.1 2.0 2 0 0 2 2 2 0 Post-transcriptional regulator TPMT PF05724.11 ORF37818 - 0.086 12.5 0.0 0.19 11.4 0.0 1.7 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) PDGF PF00341.17 ORF35653 - 8.3 6.8 8.7 0.32 11.3 0.9 2.3 1 1 1 2 2 2 0 PDGF/VEGF domain TEX19 PF15553.6 ORF33196 - 0.13 12.3 0.1 0.23 11.4 0.1 1.3 1 0 0 1 1 1 0 Testis-expressed protein 19 Pkinase PF00069.25 ORF32822 - 6.8e-54 183.0 0.0 7.9e-54 182.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF32822 - 2.5e-25 89.3 0.0 3e-25 89.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF32822 - 1.6e-06 27.7 0.0 3.1e-06 26.7 0.0 1.4 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 ORF32822 - 6.8e-05 22.3 0.0 9.5e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF32822 - 0.0012 17.8 0.0 0.0017 17.4 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain FTA2 PF13095.6 ORF32822 - 0.005 16.5 0.0 1.2 8.7 0.0 2.2 2 0 0 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF32822 - 0.02 13.7 0.0 0.029 13.2 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Ank_4 PF13637.6 ORF31166 - 1.1e-13 51.3 0.3 0.00038 21.0 0.0 3.6 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 ORF31166 - 2.4e-12 46.7 1.1 0.00038 20.8 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 ORF31166 - 1.1e-11 43.8 0.4 0.014 15.9 0.0 3.9 3 0 0 3 3 3 3 Ankyrin repeat Ank_2 PF12796.7 ORF31166 - 3.4e-11 43.6 0.0 8.2e-06 26.3 0.0 2.6 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF31166 - 9.2e-08 32.2 0.2 1.3 9.4 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeats (many copies) LemA PF04011.12 ORF26635 - 0.074 12.9 0.5 0.11 12.3 0.5 1.3 1 0 0 1 1 1 0 LemA family Macro PF01661.21 ORF25993 - 2.3e-34 117.9 0.4 9.8e-34 115.9 0.2 2.1 1 1 1 2 2 2 1 Macro domain DUF2018 PF09442.10 ORF25993 - 0.042 14.8 1.9 0.11 13.5 1.5 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF2018) DUF1264 PF06884.11 ORF25993 - 0.052 13.1 0.0 0.11 12.1 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1264) Fasciclin PF02469.22 ORF25993 - 0.11 12.7 0.3 4.9 7.4 0.0 2.2 2 0 0 2 2 2 0 Fasciclin domain DLH PF01738.18 ORF25776 - 1.5e-25 90.0 0.0 1.9e-25 89.7 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 ORF25776 - 0.0014 18.6 0.1 0.11 12.4 0.0 2.2 2 0 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S9 PF00326.21 ORF25776 - 0.0036 16.8 0.3 0.0057 16.1 0.3 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family DUF1100 PF06500.11 ORF25776 - 0.014 14.2 0.0 0.023 13.5 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) PDGF PF00341.17 ORF21528 - 8.3 6.8 8.7 0.32 11.3 0.9 2.3 1 1 1 2 2 2 0 PDGF/VEGF domain SNARE_assoc PF09335.11 ORF19301 - 2.5e-20 73.2 9.8 6.9e-17 62.0 8.2 2.3 2 0 0 2 2 2 2 SNARE associated Golgi protein DUF3139 PF11337.8 ORF19301 - 0.04 14.6 0.3 0.04 14.6 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) FtsL PF04999.13 ORF19301 - 0.21 11.6 0.5 0.42 10.6 0.0 1.8 2 0 0 2 2 2 0 Cell division protein FtsL Proteasome PF00227.26 ORF16585 - 9.5e-44 149.2 0.1 1.3e-43 148.7 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF16585 - 1e-12 47.5 0.1 2e-12 46.5 0.1 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature DNA_pol_A_exo1 PF01612.20 ORF150458 - 4e-21 75.5 1.7 5.3e-21 75.1 1.7 1.1 1 0 0 1 1 1 1 3'-5' exonuclease PTS_EIIC PF02378.18 ORF14484 - 1.5e-23 83.4 10.1 1.5e-23 83.4 10.1 2.1 1 1 1 2 2 2 1 Phosphotransferase system, EIIC KIF1B PF12423.8 ORF143129 - 0.0076 16.7 0.1 0.023 15.1 0.1 1.9 1 0 0 1 1 1 1 Kinesin protein 1B TOM20_plant PF06552.12 ORF143129 - 0.058 13.1 1.5 0.1 12.3 1.5 1.4 1 0 0 1 1 1 0 Plant specific mitochondrial import receptor subunit TOM20 PAP1 PF08601.10 ORF142808 - 2.9 7.5 12.7 0.056 13.2 3.6 2.0 1 1 1 2 2 2 0 Transcription factor PAP1 Citrate_synt PF00285.21 ORF141549 - 9.2e-22 77.6 0.0 9.1e-21 74.3 0.0 1.9 1 1 0 1 1 1 1 Citrate synthase, C-terminal domain Pro_isomerase PF00160.21 ORF138668 - 2.4e-46 157.9 0.0 3.3e-46 157.4 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pkinase PF00069.25 ORF137484 - 1.3e-11 44.4 0.0 1.9e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF137484 - 0.0016 17.8 0.0 0.0022 17.4 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_Tyr PF07714.17 ORF137484 - 0.0019 17.5 0.0 0.0027 17.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase INTAP PF16617.5 ORF137484 - 3.9 7.9 8.5 6.2 7.2 7.5 2.0 1 1 0 1 1 1 0 Intersectin and clathrin adaptor AP2 binding region Aminotran_4 PF01063.19 ORF135167 - 6.1e-15 55.7 0.0 7e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 Amino-transferase class IV IBR PF01485.21 ORF127999 - 9.8e-05 22.5 8.3 9.8e-05 22.5 8.3 2.8 2 0 0 2 2 2 1 IBR domain, a half RING-finger domain DUF2574 PF10836.8 ORF127999 - 0.032 14.1 0.0 0.072 13.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2574) ARGLU PF15346.6 ORF127999 - 0.38 10.6 8.2 2.6 7.9 2.7 2.2 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 zf_CCCH_5 PF18384.1 ORF125082 - 0.25 11.5 0.2 0.25 11.5 0.2 2.3 2 0 0 2 2 2 0 Unkempt Zinc finger domain 1 (Znf1) Chitin_synth_1 PF01644.17 ORF122887 - 0.051 13.5 0.0 0.074 13.0 0.0 1.3 1 0 0 1 1 1 0 Chitin synthase PCMT PF01135.19 ORF122887 - 0.15 11.8 0.0 0.39 10.4 0.0 1.6 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Pkinase PF00069.25 ORF119251 - 6.5e-51 173.2 0.0 9.5e-51 172.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF119251 - 3.1e-32 111.9 0.0 4.1e-32 111.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF119251 - 1.8e-09 36.9 0.0 2.7e-09 36.3 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF119251 - 2.4e-05 23.8 0.0 0.00056 19.3 0.0 2.2 2 0 0 2 2 2 1 Kinase-like APH PF01636.23 ORF119251 - 0.016 15.1 0.0 0.044 13.7 0.0 1.7 1 1 0 1 1 1 0 Phosphotransferase enzyme family FTA2 PF13095.6 ORF119251 - 0.018 14.7 0.0 0.037 13.7 0.0 1.5 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 ORF119251 - 0.033 13.5 0.0 0.046 13.1 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family IFRD PF05004.13 ORF119251 - 0.035 13.2 0.0 0.054 12.6 0.0 1.2 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) TFIIF_beta PF02270.15 ORF119251 - 0.094 12.9 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 TFIIF, beta subunit HTH domain Nicastrin PF05450.15 ORF113232 - 0.25 10.8 0.0 0.38 10.2 0.0 1.2 1 0 0 1 1 1 0 Nicastrin PPR_2 PF13041.6 ORF1123 - 1.5e-37 127.5 5.6 1.9e-17 63.2 0.2 6.2 3 1 3 6 6 6 5 PPR repeat family PPR_3 PF13812.6 ORF1123 - 2.4e-33 114.0 0.0 2.8e-12 46.5 0.1 3.8 3 1 1 4 4 4 4 Pentatricopeptide repeat domain PPR PF01535.20 ORF1123 - 7.4e-33 110.5 4.9 2.8e-07 30.3 0.0 7.1 7 0 0 7 7 7 6 PPR repeat PPR_long PF17177.4 ORF1123 - 5.5e-18 65.1 0.0 1.4e-10 40.9 0.0 2.2 1 1 0 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF1123 - 1e-17 63.5 3.7 6.7e-05 22.5 0.0 5.4 7 0 0 7 7 7 3 PPR repeat TPR_14 PF13428.6 ORF1123 - 0.0035 18.0 1.1 17 6.6 0.0 4.4 4 2 1 5 5 5 1 Tetratricopeptide repeat BKACE PF05853.12 ORF1123 - 0.0068 15.7 0.2 0.49 9.6 0.1 2.8 1 1 1 3 3 3 1 beta-keto acid cleavage enzyme Clathrin PF00637.20 ORF1123 - 0.021 14.7 0.0 1.3 8.9 0.0 2.3 2 0 0 2 2 2 0 Region in Clathrin and VPS TPR_MalT PF17874.1 ORF1123 - 0.027 13.8 0.2 0.75 9.1 0.1 2.0 2 0 0 2 2 2 0 MalT-like TPR region LRR_4 PF12799.7 ORF11142 - 0.12 12.8 2.9 0.45 11.0 2.9 2.1 1 0 0 1 1 1 0 Leucine Rich repeats (2 copies) Caps_synth_GfcC PF06251.11 ORF108924 - 4e-91 304.7 0.0 4.5e-91 304.5 0.0 1.0 1 0 0 1 1 1 1 Capsule biosynthesis GfcC FGGY_C PF02782.16 ORF107727 - 1.2e-28 100.2 1.0 1.7e-28 99.7 1.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain XPC-binding PF09280.11 ORF107727 - 0.0048 16.6 0.2 0.012 15.3 0.2 1.6 1 0 0 1 1 1 1 XPC-binding domain U83 PF17465.2 ORF10656 - 0.15 12.2 0.0 0.61 10.3 0.0 1.8 2 0 0 2 2 2 0 Chemokine-like protein, HHV-6 U83 gene product Glutaminase PF04960.15 ORF105410 - 0.028 13.6 0.0 0.05 12.8 0.0 1.4 1 0 0 1 1 1 0 Glutaminase Ank_2 PF12796.7 ORF100044 - 2.9e-31 107.9 6.6 5.4e-12 46.1 0.3 4.0 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF100044 - 2.2e-25 88.7 3.6 1.2e-06 28.9 0.1 5.3 2 1 5 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF100044 - 7.5e-24 81.2 2.7 0.0019 18.6 0.1 6.2 6 0 0 6 6 6 5 Ankyrin repeat Ank PF00023.30 ORF100044 - 4.7e-21 74.2 10.7 0.00063 20.1 0.5 6.0 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF100044 - 6.1e-21 74.2 9.2 4.1e-06 27.0 0.3 6.0 3 1 3 6 6 6 5 Ankyrin repeats (many copies) TypeIII_RM_meth PF12564.8 NODE_29759_length_730_cov_290.136691_g15670_i1forward_frame_1 - 0.39 10.9 7.0 0.13 12.4 0.8 2.8 3 0 0 3 3 3 0 Type III restriction/modification enzyme methylation subunit DUF3671 PF12420.8 NODE_29708_length_732_cov_19.724534_g19347_i1reverse_frame_1 - 0.02 15.0 3.8 1 9.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function TypeIII_RM_meth PF12564.8 NODE_29658_length_733_cov_3.232092_g23405_i0reverse_frame_3 - 0.11 12.6 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Type III restriction/modification enzyme methylation subunit GDNF PF02351.16 NODE_29648_length_733_cov_111.078797_g23396_i0reverse_frame_2 - 2.7 9.0 10.7 1.7 9.7 4.8 2.9 1 1 2 3 3 3 0 GDNF/GAS1 domain Arm-DNA-bind_3 PF13356.6 NODE_29648_length_733_cov_111.078797_g23396_i0forward_frame_2 - 0.026 14.9 0.1 0.19 12.1 0.1 2.1 2 0 0 2 2 2 0 Arm DNA-binding domain Aminotran_1_2 PF00155.21 NODE_29622_length_734_cov_3.167382_g23380_i0forward_frame_2 - 6.2e-25 88.1 0.0 7.7e-25 87.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Kinesin PF00225.23 NODE_29560_length_735_cov_3.224286_g23337_i0reverse_frame_3 - 0.041 12.8 5.0 0.048 12.6 0.1 2.1 2 0 0 2 2 2 0 Kinesin motor domain APC_r PF05923.12 NODE_29560_length_735_cov_3.224286_g23337_i0forward_frame_3 - 0.033 13.9 0.7 1.2 9.0 0.1 3.0 2 0 0 2 2 2 0 APC repeat Fez1 PF06818.15 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.0039 17.7 29.5 0.0039 17.7 29.5 2.3 1 1 1 2 2 2 1 Fez1 Baculo_PEP_C PF04513.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.0078 16.3 17.3 0.2 11.7 7.4 2.9 2 1 0 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus DivIC PF04977.15 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.016 15.0 7.1 0.016 15.0 7.1 5.3 2 1 2 5 5 5 0 Septum formation initiator Rx_N PF18052.1 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.019 15.2 21.5 0.019 15.2 10.5 3.2 1 1 2 3 3 3 0 Rx N-terminal domain Flagellin_C PF00700.21 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.1 13.0 0.1 0.1 13.0 0.1 3.8 3 1 1 4 4 4 0 Bacterial flagellin C-terminal helical region DUF3584 PF12128.8 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.16 9.5 36.0 0.28 8.6 10.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) TPR_MLP1_2 PF07926.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.17 12.0 44.1 0.92 9.6 2.5 3.6 1 1 3 4 4 4 0 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.19 10.6 46.8 0.058 12.3 22.3 2.7 1 1 2 3 3 3 0 Spc7 kinetochore protein ZapB PF06005.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.23 11.9 53.9 17 5.9 6.6 5.6 1 1 2 3 3 2 0 Cell division protein ZapB FUSC PF04632.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.25 9.8 2.6 0.33 9.5 2.6 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Tup_N PF08581.10 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.36 11.2 44.0 0.29 11.5 4.7 4.6 1 1 3 4 4 4 0 Tup N-terminal KASH_CCD PF14662.6 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 0.57 10.0 48.0 0.94 9.3 27.1 2.6 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF1664 PF07889.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1 9.4 24.5 2.6 8.1 4.2 3.9 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.3 9.5 54.1 0.67 10.5 18.5 3.3 1 1 2 3 3 3 0 Apg6 coiled-coil region CALCOCO1 PF07888.11 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.4 7.7 38.2 2.6 6.8 35.1 1.9 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Cep57_MT_bd PF06657.13 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.6 9.2 30.9 0.34 11.4 4.8 4.9 2 2 3 5 5 5 0 Centrosome microtubule-binding domain of Cep57 DUF724 PF05266.14 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.6 8.5 40.4 1.9 8.3 13.8 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF724) HMMR_N PF15905.5 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.7 8.0 50.1 0.041 13.3 25.9 2.1 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal AAA_13 PF13166.6 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 1.8 7.1 41.5 0.15 10.7 11.8 2.0 1 1 1 2 2 2 0 AAA domain ADIP PF11559.8 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 3.2 7.8 45.9 12 5.9 24.8 3.9 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding Golgin_A5 PF09787.9 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 3.2 7.1 45.2 0.23 10.9 25.9 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 Spc24 PF08286.11 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 4.5 7.6 44.9 0.96 9.7 6.7 5.0 1 1 3 4 4 4 0 Spc24 subunit of Ndc80 Syntaxin-6_N PF09177.11 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 4.9 7.8 27.1 6.9 7.3 4.5 3.5 1 1 2 3 3 3 0 Syntaxin 6, N-terminal SlyX PF04102.12 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 8.7 7.0 28.1 4.1 8.1 6.1 4.7 2 1 3 5 5 5 0 SlyX DUF5082 PF16888.5 NODE_29556_length_735_cov_70.574286_g21161_i1forward_frame_3 - 9.5 6.5 42.0 1.4 9.2 18.5 3.7 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) Rhomboid_SP PF12595.8 NODE_29552_length_735_cov_91.930000_g23330_i0forward_frame_2 - 2.1 7.6 9.5 3.1 7.1 9.3 1.4 1 1 0 1 1 1 0 Rhomboid serine protease DUF2518 PF10726.9 NODE_29551_length_735_cov_91.948571_g23329_i0reverse_frame_3 - 0.16 11.6 0.7 0.28 10.8 0.7 1.4 1 0 0 1 1 1 0 Protein of function (DUF2518) Macoilin PF09726.9 NODE_29551_length_735_cov_91.948571_g23329_i0reverse_frame_2 - 2.7 6.4 3.3 4.8 5.6 3.3 1.3 1 0 0 1 1 1 0 Macoilin family DUF2852 PF11014.8 NODE_29551_length_735_cov_91.948571_g23329_i0forward_frame_3 - 0.033 14.3 0.6 0.071 13.3 0.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2852) DUF1180 PF06679.12 NODE_29546_length_735_cov_143.941429_g23325_i0forward_frame_2 - 0.018 15.5 0.6 0.034 14.6 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Dus PF01207.17 NODE_29542_length_735_cov_156.332857_g23322_i0reverse_frame_2 - 4.2e-19 68.8 0.0 5.9e-19 68.3 0.0 1.3 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) CBM46 PF18448.1 NODE_29517_length_735_cov_32451.928571_g23304_i0reverse_frame_2 - 0.065 13.6 2.1 4.3 7.7 0.2 2.6 1 1 2 3 3 3 0 Carbohydrate binding domain Thioredoxin_2 PF13098.6 ORF97328 - 5.7e-09 36.4 0.0 1.8e-08 34.8 0.0 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 ORF97328 - 1.4e-06 28.2 0.0 3.1e-05 23.9 0.0 2.1 1 1 0 1 1 1 1 Thioredoxin TraF PF13728.6 ORF97328 - 0.00028 20.8 0.0 0.00076 19.4 0.0 1.6 1 1 0 1 1 1 1 F plasmid transfer operon protein Glutaredoxin PF00462.24 ORF97328 - 0.016 15.4 0.0 0.037 14.3 0.0 1.6 1 0 0 1 1 1 0 Glutaredoxin DUF836 PF05768.14 ORF97328 - 0.022 15.2 0.0 0.035 14.5 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) Lipase_3 PF01764.25 ORF94262 - 0.00014 21.7 0.3 0.00036 20.4 0.3 1.8 1 1 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF94262 - 0.058 14.0 0.1 0.12 13.0 0.1 1.4 1 1 0 1 1 1 0 Alpha/beta hydrolase family ABC_tran PF00005.27 ORF90199 - 1.8e-28 99.8 0.0 3.3e-28 98.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF90199 - 3.7e-08 33.1 0.2 1.2e-05 24.9 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain NTPase_1 PF03266.15 ORF90199 - 0.00067 19.6 0.7 0.4 10.6 0.0 2.4 2 0 0 2 2 2 2 NTPase MMR_HSR1 PF01926.23 ORF90199 - 0.00075 19.6 0.1 0.0028 17.7 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF90199 - 0.0093 15.7 0.0 0.026 14.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain FKBP_N_2 PF18023.1 ORF90199 - 0.011 15.9 0.3 0.022 14.8 0.3 1.5 1 0 0 1 1 1 0 BDBT FKBP like N-terminal AAA PF00004.29 ORF90199 - 0.011 16.1 0.2 0.13 12.7 0.2 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.17 ORF90199 - 0.017 15.2 0.0 0.039 14.0 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_24 PF13479.6 ORF90199 - 0.019 14.7 0.1 0.03 14.0 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF90199 - 0.019 15.5 0.5 0.048 14.2 0.1 1.7 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 ORF90199 - 0.02 15.4 0.0 0.035 14.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF90199 - 0.025 13.6 0.0 0.042 12.8 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 ORF90199 - 0.039 13.7 0.2 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein CbiA PF01656.23 ORF90199 - 0.042 13.9 0.0 0.073 13.1 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RNA_helicase PF00910.22 ORF90199 - 0.06 13.7 1.1 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA_5 PF07728.14 ORF90199 - 0.12 12.4 0.3 20 5.1 0.1 2.7 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) Imm58 PF15581.6 ORF90199 - 0.12 12.4 0.1 0.26 11.4 0.1 1.6 1 1 0 1 1 1 0 Immunity protein 58 Zeta_toxin PF06414.12 ORF90199 - 0.13 11.5 0.2 0.55 9.5 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_22 PF13401.6 ORF90199 - 0.18 12.1 0.9 0.83 9.9 0.9 2.1 1 1 0 1 1 1 0 AAA domain Trigger_C PF05698.14 ORF90158 - 1.4e-41 142.2 11.3 2.5e-41 141.4 11.3 1.4 1 0 0 1 1 1 1 Bacterial trigger factor protein (TF) C-terminus FKBP_C PF00254.28 ORF90158 - 9.4e-07 29.1 0.2 2.4e-06 27.8 0.2 1.7 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase SurA_N_3 PF13624.6 ORF90158 - 0.0029 17.4 1.7 0.0046 16.8 1.2 1.7 1 1 0 1 1 1 1 SurA N-terminal domain DUF4172 PF13776.6 ORF90158 - 0.018 15.4 2.0 0.42 11.0 0.1 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4172) DUF3811 PF11656.8 ORF90158 - 0.046 14.1 1.8 0.083 13.3 0.1 2.2 2 0 0 2 2 2 0 YjbD family (DUF3811) Arabinose_Isome PF02610.15 ORF90158 - 0.8 8.9 5.0 0.74 9.0 2.1 1.9 1 1 1 2 2 2 0 L-arabinose isomerase Herpes_UL49_5 PF05702.11 ORF88998 - 0.05 13.7 0.3 0.1 12.7 0.3 1.4 1 0 0 1 1 1 0 Herpesvirus UL49.5 envelope/tegument protein Peptidase_C1 PF00112.23 ORF86521 - 5.6e-47 160.6 10.1 6.5e-47 160.4 10.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease Proteasome PF00227.26 ORF86185 - 4e-44 150.4 0.8 5.2e-44 150.0 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF86185 - 5.8e-05 22.7 0.0 0.00011 21.8 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature KKLCAg1 PF15204.6 ORF86141 - 0.81 9.8 0.1 0.81 9.8 0.1 2.7 3 0 0 3 3 3 0 Kita-kyushu lung cancer antigen 1 MORN PF02493.20 ORF85496 - 1.7e-07 30.7 10.1 0.00066 19.4 3.3 3.6 3 0 0 3 3 3 2 MORN repeat Ribosomal_L24e PF01246.20 ORF85145 - 0.027 14.7 0.4 0.66 10.2 0.0 2.2 2 0 0 2 2 2 0 Ribosomal protein L24e ResB PF05140.14 ORF79257 - 0.54 8.9 3.5 0.87 8.2 3.5 1.3 1 0 0 1 1 1 0 ResB-like family Opy2 PF09463.10 ORF79167 - 5.4 7.4 10.0 5.8 7.3 3.2 2.5 2 0 0 2 2 2 0 Opy2 protein S1 PF00575.23 ORF78755 - 7.4e-06 26.2 0.2 0.00021 21.5 0.0 2.3 2 1 0 2 2 2 1 S1 RNA binding domain DUF1860 PF08949.10 ORF78587 - 0.086 12.6 0.8 0.14 11.9 0.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1860) Opy2 PF09463.10 ORF78587 - 8.2 6.8 8.0 2.9 8.3 4.6 2.1 2 1 0 2 2 2 0 Opy2 protein zf-CDGSH PF09360.10 ORF70680 - 1.1e-15 57.5 1.8 2.5e-09 37.2 0.1 2.6 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type DUF4284 PF14112.6 ORF70595 - 0.61 11.0 6.8 0.5 11.3 4.9 1.9 2 1 0 2 2 2 0 Immunity protein 22 Hydrolase_4 PF12146.8 ORF70274 - 5.6e-10 38.9 0.1 8.6e-08 31.7 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF70274 - 2.8e-09 37.0 0.0 2.7e-05 24.0 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 ORF70274 - 2.4e-06 28.3 6.8 2.1e-05 25.3 6.8 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_4 PF08386.10 ORF70274 - 7.9e-05 22.7 0.1 0.0002 21.4 0.1 1.6 2 0 0 2 2 2 1 TAP-like protein Abhydrolase_5 PF12695.7 ORF70274 - 0.0082 15.9 0.0 0.98 9.2 0.0 2.3 1 1 0 2 2 2 1 Alpha/beta hydrolase family Amidase PF01425.21 ORF70274 - 0.036 13.0 0.0 0.06 12.3 0.0 1.3 1 0 0 1 1 1 0 Amidase Ser_hydrolase PF06821.13 ORF70274 - 0.055 13.3 0.1 0.35 10.7 0.1 2.1 1 1 0 1 1 1 0 Serine hydrolase Abhydrolase_2 PF02230.16 ORF70274 - 0.14 11.9 0.0 2 8.2 0.0 2.0 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase LIP PF03583.14 ORF70274 - 0.16 11.3 0.1 7.7 5.8 0.0 2.2 2 0 0 2 2 2 0 Secretory lipase Esterase PF00756.20 ORF70274 - 0.16 11.6 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 Putative esterase MORN PF02493.20 ORF67494 - 4e-22 76.7 47.8 1e-06 28.3 4.5 7.0 7 0 0 7 7 7 5 MORN repeat DUF3048_C PF17479.2 ORF67494 - 0.047 14.1 13.3 0.08 13.3 1.1 3.7 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain Zap1_zf2 PF18217.1 ORF67494 - 0.11 12.5 1.7 0.69 10.0 0.3 2.6 2 0 0 2 2 2 0 Zap1 zinc finger 2 SRA1 PF07304.11 ORF66661 - 0.12 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) GvpG PF05120.12 ORF66661 - 0.14 12.2 0.1 0.24 11.5 0.1 1.4 1 0 0 1 1 1 0 Gas vesicle protein G SNF PF00209.18 ORF65076 - 1.5e-25 89.9 4.8 1.8e-25 89.6 4.8 1.0 1 0 0 1 1 1 1 Sodium:neurotransmitter symporter family GST_N_3 PF13417.6 ORF60316 - 3.2e-10 40.3 0.1 7.5e-10 39.1 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF60316 - 1.2e-08 35.1 0.0 1.9e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF60316 - 2e-08 34.4 0.0 4e-08 33.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF60316 - 4.4e-07 30.0 0.0 8.1e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF60316 - 1.6e-06 28.4 0.1 7e-06 26.3 0.1 2.1 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF60316 - 0.1 13.4 0.0 0.22 12.3 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase N-terminal domain GST_N_3 PF13417.6 ORF59925 - 5.5e-13 49.1 0.0 9.4e-13 48.4 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF59925 - 6.6e-11 42.3 0.0 9e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF59925 - 1.8e-09 37.8 0.0 3.1e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF59925 - 9.3e-08 32.3 0.0 2.3e-07 31.1 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain ABC_tran PF00005.27 ORF57356 - 2.3e-29 102.6 0.0 3.8e-29 102.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF57356 - 2.1e-07 30.6 0.4 6.4e-05 22.5 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF57356 - 0.00075 19.6 0.2 0.0026 17.8 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF57356 - 0.0038 17.3 0.0 0.0085 16.2 0.0 1.6 1 0 0 1 1 1 1 Immunity protein 58 AAA_29 PF13555.6 ORF57356 - 0.01 15.6 0.0 0.026 14.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_18 PF13238.6 ORF57356 - 0.013 16.0 0.1 0.021 15.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 ORF57356 - 0.014 15.1 0.0 0.023 14.4 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain DUF87 PF01935.17 ORF57356 - 0.016 15.3 0.0 0.035 14.2 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain NTPase_1 PF03266.15 ORF57356 - 0.017 15.0 0.6 0.28 11.1 0.1 2.3 2 0 0 2 2 2 0 NTPase AAA_24 PF13479.6 ORF57356 - 0.029 14.1 0.3 0.047 13.4 0.2 1.5 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF57356 - 0.03 14.1 0.1 0.48 10.2 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF57356 - 0.03 13.3 0.0 0.052 12.5 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_23 PF13476.6 ORF57356 - 0.034 14.7 1.3 0.044 14.3 0.2 1.7 2 1 0 2 2 2 0 AAA domain AAA PF00004.29 ORF57356 - 0.042 14.3 0.1 0.44 11.0 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF57356 - 0.042 13.9 0.4 10 6.2 0.0 2.8 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 ORF57356 - 0.047 14.1 0.7 0.97 9.8 0.1 2.2 2 0 0 2 2 2 0 RNA helicase CbiA PF01656.23 ORF57356 - 0.054 13.6 0.1 0.1 12.6 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.6 ORF57356 - 0.13 11.9 0.2 0.61 9.8 0.2 1.9 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF57356 - 0.16 12.2 1.1 0.87 9.9 1.1 2.1 1 1 0 1 1 1 0 AAA domain Proteasome PF00227.26 ORF57292 - 4e-44 150.4 0.8 5.2e-44 150.0 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF57292 - 5.8e-05 22.7 0.0 0.00011 21.8 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Proteasome PF00227.26 ORF55816 - 4e-44 150.4 0.8 5.2e-44 150.0 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF55816 - 5.8e-05 22.7 0.0 0.00011 21.8 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Proteasome PF00227.26 ORF5214 - 4e-44 150.4 0.8 5.2e-44 150.0 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF5214 - 5.8e-05 22.7 0.0 0.00011 21.8 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature MatE PF01554.18 ORF51435 - 3.8e-11 42.9 11.8 5e-11 42.5 11.0 1.6 1 1 1 2 2 2 1 MatE Macro PF01661.21 ORF45331 - 7.3e-16 58.3 0.0 1.8e-15 57.0 0.0 1.7 1 0 0 1 1 1 1 Macro domain RNase_H2_suC PF08615.11 ORF45331 - 0.0072 16.5 0.5 0.012 15.8 0.5 1.5 1 0 0 1 1 1 1 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) DUF2759 PF10958.8 ORF45331 - 0.064 13.0 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) PSCyt3 PF07627.11 ORF45331 - 0.12 12.7 0.9 0.32 11.3 0.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1588) PI3K_1B_p101 PF10486.9 ORF45331 - 1.8 6.3 13.1 2.5 5.8 13.1 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit DUF3895 PF13034.6 ORF42910 - 0.32 11.0 3.7 10 6.2 0.3 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3895) CUB PF00431.20 ORF42499 - 0.036 14.4 0.0 0.12 12.7 0.0 1.8 1 1 0 1 1 1 0 CUB domain Ras PF00071.22 ORF40217 - 1.4e-37 128.8 0.4 1.8e-37 128.4 0.4 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF40217 - 2.4e-19 69.7 0.4 5.9e-19 68.4 0.0 1.8 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF40217 - 5.5e-15 55.3 0.2 6.9e-15 54.9 0.2 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF40217 - 5e-06 26.6 0.0 1.1e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF40217 - 0.00032 20.3 1.0 0.00068 19.2 1.0 1.6 1 1 0 1 1 1 1 Ferrous iron transport protein B Gtr1_RagA PF04670.12 ORF40217 - 0.00042 19.7 0.7 0.00061 19.2 0.5 1.3 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF40217 - 0.00049 19.7 2.0 0.0061 16.1 0.4 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AAA PF00004.29 ORF40217 - 0.038 14.4 0.4 0.65 10.4 0.0 2.6 2 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 ORF40217 - 0.06 13.1 0.0 0.2 11.4 0.0 1.7 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain SKA2 PF16740.5 ORF36851 - 0.1 12.4 3.3 0.24 11.2 0.2 2.5 3 0 0 3 3 3 0 Spindle and kinetochore-associated protein 2 MGTL PF17059.5 ORF36851 - 8.7 6.3 5.7 1.8 8.5 0.7 2.2 2 0 0 2 2 2 0 MgtA leader peptide DUF4973 PF16343.5 ORF35567 - 0.088 12.9 0.3 0.14 12.2 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4973) ABC_tran PF00005.27 ORF34741 - 3.6e-29 102.0 0.0 6e-29 101.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF34741 - 9.8e-09 35.0 0.4 3e-06 26.8 0.2 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF34741 - 0.00077 19.5 0.2 0.0027 17.8 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase NTPase_1 PF03266.15 ORF34741 - 0.0093 15.9 0.7 0.4 10.6 0.0 2.3 2 0 0 2 2 2 1 NTPase AAA_29 PF13555.6 ORF34741 - 0.012 15.3 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 ORF34741 - 0.013 15.9 0.2 0.17 12.3 0.2 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 ORF34741 - 0.014 15.9 0.0 0.024 15.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF34741 - 0.015 15.4 0.1 0.039 14.0 0.0 1.7 2 0 0 2 2 2 0 Helicase HerA, central domain RNA_helicase PF00910.22 ORF34741 - 0.016 15.6 0.9 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase MeaB PF03308.16 ORF34741 - 0.025 13.6 0.0 0.042 12.8 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_23 PF13476.6 ORF34741 - 0.03 14.8 1.7 0.048 14.2 0.1 1.9 2 1 0 2 2 2 0 AAA domain CbiA PF01656.23 ORF34741 - 0.045 13.8 0.1 0.075 13.1 0.1 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ATP_bind_1 PF03029.17 ORF34741 - 0.045 13.5 0.2 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 ORF34741 - 0.048 13.4 0.2 0.076 12.7 0.2 1.5 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 ORF34741 - 0.061 12.4 0.3 2.1 7.4 0.0 2.5 2 1 0 2 2 2 0 Type II/IV secretion system protein IstB_IS21 PF01695.17 ORF34741 - 0.11 12.2 0.1 1.7 8.3 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF3911 PF13050.6 ORF34741 - 0.16 12.1 0.4 0.6 10.3 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3911) AAA_22 PF13401.6 ORF34741 - 0.16 12.3 1.1 0.92 9.8 1.1 2.1 1 1 0 1 1 1 0 AAA domain DUF4199 PF13858.6 ORF33552 - 0.3 11.5 16.2 0.33 11.3 9.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4199) SAM_3 PF18016.1 ORF33472 - 0.047 13.5 0.2 0.09 12.6 0.2 1.5 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Sugar_tr PF00083.24 ORF33235 - 4.9e-24 85.0 11.6 6.2e-24 84.7 11.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter DUF2070 PF09843.9 ORF33235 - 0.079 11.2 10.2 0.091 11.0 10.2 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Lipase_3 PF01764.25 ORF31492 - 2.9e-12 46.6 0.0 4.4e-12 46.1 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_6 PF12697.7 ORF31492 - 0.00022 21.9 0.5 0.00029 21.5 0.5 1.2 1 1 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 ORF31492 - 0.026 14.2 0.1 0.039 13.6 0.1 1.3 1 0 0 1 1 1 0 Putative esterase Thioesterase PF00975.20 ORF31492 - 0.032 14.3 0.1 0.05 13.7 0.1 1.5 1 1 0 1 1 1 0 Thioesterase domain Abhydrolase_1 PF00561.20 ORF31492 - 0.075 12.7 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 alpha/beta hydrolase fold DSPc PF00782.20 ORF29194 - 3.2e-26 91.7 0.0 4.2e-26 91.3 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 ORF29194 - 0.00025 20.7 0.0 0.00035 20.2 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 ORF29194 - 0.023 14.8 0.0 0.032 14.3 0.0 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate Myotub-related PF06602.14 ORF29194 - 0.033 13.1 0.0 0.044 12.7 0.0 1.1 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain CDKN3 PF05706.12 ORF29194 - 0.05 13.3 0.1 0.083 12.5 0.1 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase3 PF13350.6 ORF29194 - 0.13 12.3 0.0 0.16 11.9 0.0 1.1 1 0 0 1 1 1 0 Tyrosine phosphatase family DUF2126 PF09899.9 ORF27846 - 0.19 9.7 0.1 0.24 9.5 0.1 1.1 1 0 0 1 1 1 0 Putative amidoligase enzyme (DUF2126) IGF2_C PF08365.11 ORF27846 - 2.5 8.2 5.2 22 5.2 1.0 2.6 2 0 0 2 2 2 0 Insulin-like growth factor II E-peptide 14-3-3 PF00244.20 ORF26486 - 1e-63 214.8 11.2 1.2e-63 214.7 11.2 1.0 1 0 0 1 1 1 1 14-3-3 protein DUF2663 PF10864.8 ORF26138 - 1.7 9.0 3.3 24 5.3 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2663) DUF2516 PF10724.9 ORF26138 - 2.8 8.3 5.0 2.9 8.2 3.7 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2516) GST_N_3 PF13417.6 ORF24280 - 2.3e-10 40.7 0.0 5.6e-10 39.5 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF24280 - 4.3e-09 36.5 0.0 8.9e-09 35.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF24280 - 3.6e-08 33.5 0.0 7e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF24280 - 6e-07 29.6 0.0 1.2e-06 28.6 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF24280 - 7.2e-07 29.5 0.1 2.5e-06 27.7 0.1 2.0 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Peptidase_C1 PF00112.23 ORF23442 - 5.6e-47 160.6 10.1 6.5e-47 160.4 10.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease MORN PF02493.20 ORF23356 - 2.9e-36 121.2 50.9 8.2e-09 34.9 2.5 7.3 7 0 0 7 7 7 6 MORN repeat Pyridox_oxase_2 PF12766.7 ORF23331 - 5.8e-08 33.3 0.3 2.3e-07 31.3 0.0 2.1 3 0 0 3 3 3 1 Pyridoxamine 5'-phosphate oxidase NTP_transferase PF00483.23 ORF23331 - 0.029 13.9 0.1 0.04 13.5 0.1 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase SWIRM PF04433.17 ORF23331 - 0.041 14.2 0.1 0.12 12.8 0.1 1.8 1 0 0 1 1 1 0 SWIRM domain Conotoxin PF02950.17 ORF2223 - 0.0029 18.6 0.3 0.55 11.3 0.0 2.4 2 0 0 2 2 2 1 Conotoxin DUF2500 PF10694.9 ORF2223 - 0.0054 17.2 0.2 0.042 14.4 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2500) ATP-synt_8 PF00895.20 ORF2223 - 0.0093 16.4 0.1 12 6.5 0.0 3.3 3 0 0 3 3 3 0 ATP synthase protein 8 EphA2_TM PF14575.6 ORF2223 - 0.0095 16.8 0.9 3.9 8.4 0.3 2.6 2 1 0 2 2 2 1 Ephrin type-A receptor 2 transmembrane domain Connexin PF00029.19 ORF2223 - 0.011 15.5 0.3 0.016 15.0 0.3 1.2 1 0 0 1 1 1 0 Connexin CD20 PF04103.15 ORF2223 - 0.012 15.7 0.1 0.021 14.9 0.1 1.4 1 0 0 1 1 1 0 CD20-like family XK-related PF09815.9 ORF2223 - 0.013 14.5 0.1 0.018 14.1 0.1 1.1 1 0 0 1 1 1 0 XK-related protein SID-1_RNA_chan PF13965.6 ORF2223 - 0.015 13.7 0.2 0.019 13.4 0.2 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 MTBP_N PF14918.6 ORF2223 - 0.015 14.7 0.6 0.021 14.3 0.6 1.1 1 0 0 1 1 1 0 MDM2-binding G0-G1_switch_2 PF15103.6 ORF2223 - 0.021 15.2 0.2 0.044 14.2 0.2 1.5 1 0 0 1 1 1 0 G0/G1 switch protein 2 EMC3_TMCO1 PF01956.16 ORF2223 - 0.027 14.2 0.6 0.027 14.2 0.6 1.7 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like WBP-1 PF11669.8 ORF2223 - 0.031 14.9 6.5 2.7 8.7 5.1 2.6 1 1 1 2 2 2 0 WW domain-binding protein 1 OAD_gamma PF04277.13 ORF2223 - 0.065 13.8 0.1 0.31 11.6 0.0 2.1 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Ac76 PF05814.11 ORF2223 - 0.08 13.0 0.4 1.4 9.0 0.0 2.4 2 0 0 2 2 2 0 Orf76 (Ac76) UPF0542 PF15086.6 ORF2223 - 0.092 12.7 0.4 0.23 11.4 0.4 1.7 1 0 0 1 1 1 0 Uncharacterised protein family UPF0542 CLN3 PF02487.17 ORF2223 - 0.15 11.1 0.1 0.17 10.9 0.1 1.2 1 0 0 1 1 1 0 CLN3 protein FHIPEP PF00771.20 ORF2223 - 0.17 10.3 0.0 0.2 10.1 0.0 1.1 1 0 0 1 1 1 0 FHIPEP family SR-25 PF10500.9 ORF2223 - 0.19 11.3 13.0 0.36 10.4 13.0 1.4 1 1 0 1 1 1 0 Nuclear RNA-splicing-associated protein Ctr PF04145.15 ORF2223 - 0.33 11.6 2.0 0.73 10.4 0.4 1.9 1 1 1 2 2 2 0 Ctr copper transporter family DUF4834 PF16118.5 ORF2223 - 1.4 10.0 5.8 17 6.5 1.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4834) Shisa PF13908.6 ORF2223 - 3 8.0 7.1 10 6.3 7.0 2.0 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator SRA1 PF07304.11 ORF21780 - 0.12 12.2 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Steroid receptor RNA activator (SRA1) GvpG PF05120.12 ORF21780 - 0.14 12.2 0.1 0.24 11.5 0.1 1.4 1 0 0 1 1 1 0 Gas vesicle protein G ABC_tran PF00005.27 ORF21226 - 9.1e-29 100.7 0.0 1.5e-28 100.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF21226 - 1.9e-07 30.8 0.4 5.8e-05 22.6 0.2 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF21226 - 0.00081 19.5 0.3 0.0016 18.5 0.3 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF21226 - 0.0036 17.4 0.0 0.0085 16.2 0.0 1.6 1 0 0 1 1 1 1 Immunity protein 58 AAA_29 PF13555.6 ORF21226 - 0.0098 15.6 0.0 0.026 14.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 ORF21226 - 0.018 15.1 0.0 0.039 14.0 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain NTPase_1 PF03266.15 ORF21226 - 0.022 14.7 0.5 0.38 10.7 0.1 2.3 2 0 0 2 2 2 0 NTPase MeaB PF03308.16 ORF21226 - 0.025 13.6 0.0 0.042 12.8 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA PF00004.29 ORF21226 - 0.027 14.9 0.1 0.32 11.4 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 ORF21226 - 0.027 15.0 0.9 0.048 14.2 0.1 1.7 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 ORF21226 - 0.033 14.2 0.3 13 5.8 0.0 2.8 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF21226 - 0.036 14.6 0.1 0.063 13.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF21226 - 0.041 13.7 0.1 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein CbiA PF01656.23 ORF21226 - 0.046 13.8 0.1 0.093 12.8 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_24 PF13479.6 ORF21226 - 0.046 13.4 0.3 0.073 12.8 0.3 1.4 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF21226 - 0.054 13.9 0.5 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA_30 PF13604.6 ORF21226 - 0.097 12.4 0.1 0.3 10.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF21226 - 0.18 11.4 0.0 0.58 9.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 ORF21226 - 0.18 12.1 1.3 1 9.7 1.3 2.1 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 ORF21226 - 0.2 10.9 0.1 0.55 9.5 0.0 1.7 2 0 0 2 2 2 0 Zeta toxin Arrestin_N PF00339.29 ORF21046 - 9.1e-15 55.0 0.1 1.3e-14 54.5 0.1 1.2 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Arrestin_C PF02752.22 ORF21046 - 8.4e-11 42.5 0.0 9.2e-05 22.9 0.0 2.2 2 0 0 2 2 2 2 Arrestin (or S-antigen), C-terminal domain LDB19 PF13002.7 ORF21046 - 0.0012 18.5 0.0 0.0032 17.2 0.0 1.6 2 0 0 2 2 2 1 Arrestin_N terminal like Spo0M PF07070.11 ORF21046 - 0.15 11.6 0.0 9 5.8 0.0 2.5 2 1 0 2 2 2 0 SpoOM protein Pro_isomerase PF00160.21 ORF194 - 3.1e-34 118.5 0.1 3.9e-34 118.2 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Glycos_transf_1 PF00534.20 ORF17646 - 2.5e-25 89.0 0.0 7.5e-25 87.4 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF17646 - 1.1e-18 68.0 0.0 1.7e-18 67.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF17646 - 0.00017 21.9 0.1 0.0018 18.6 0.0 2.5 2 1 0 2 2 2 1 Glycosyl transferases group 1 TetR_C_20 PF17925.1 ORF17646 - 0.015 15.6 0.3 0.037 14.3 0.3 1.6 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain 3HCDH_N PF02737.18 ORF17646 - 0.026 14.4 1.1 0.068 13.0 0.4 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GREB1 PF15782.5 ORF1476 - 0.21 8.7 0.2 0.24 8.5 0.2 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Ank_2 PF12796.7 ORF146816 - 1e-40 138.1 3.1 8.9e-15 55.0 0.3 3.0 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF146816 - 2.8e-26 88.7 3.4 6.2e-06 26.2 0.1 6.0 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF146816 - 2.1e-25 88.4 6.0 6.9e-10 39.0 0.1 4.3 1 1 4 5 5 5 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF146816 - 4.5e-24 84.5 10.0 1.5e-07 31.8 0.4 4.8 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF146816 - 2.4e-23 81.5 9.6 3.7e-05 24.0 0.1 6.4 6 0 0 6 6 6 5 Ankyrin repeat bcl-2I13 PF12201.8 ORF146816 - 0.24 11.3 1.9 11 5.9 0.1 2.9 1 1 0 2 2 2 0 Bcl2-interacting killer, BH3-domain containing IspD PF01128.19 ORF146273 - 3.2e-51 174.2 1.5 3.7e-51 174.0 1.5 1.0 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transf_3 PF12804.7 ORF146273 - 1.9e-06 28.3 0.1 2.5e-06 27.9 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain ComA PF02679.15 ORF146273 - 0.037 13.5 0.1 0.068 12.6 0.1 1.5 1 1 0 1 1 1 0 (2R)-phospho-3-sulfolactate synthase (ComA) NTP_transferase PF00483.23 ORF146273 - 0.1 12.2 0.0 0.19 11.3 0.0 1.5 1 1 0 1 1 1 0 Nucleotidyl transferase zf-C2H2 PF00096.26 ORF144857 - 1.2e-10 41.3 25.5 7.1e-05 23.1 2.5 3.6 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF144857 - 3.1e-09 36.9 23.8 3.2e-06 27.3 0.8 4.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF144857 - 5.2e-06 26.9 29.5 0.00064 20.3 3.1 3.9 4 0 0 4 4 4 3 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF144857 - 0.00021 21.5 9.4 0.03 14.6 0.1 3.5 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 ORF144857 - 0.0011 18.9 0.4 0.0011 18.9 0.4 4.2 4 0 0 4 4 3 2 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF144857 - 0.037 14.7 7.3 0.057 14.1 2.2 2.5 2 0 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf_UBZ PF18439.1 ORF144857 - 0.045 13.4 4.7 3 7.5 0.2 2.9 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-met PF12874.7 ORF144857 - 0.11 13.0 14.7 0.33 11.4 0.1 3.9 3 1 0 3 3 3 0 Zinc-finger of C2H2 type zinc_ribbon_4 PF13717.6 ORF144857 - 0.29 11.1 0.1 0.29 11.1 0.1 3.0 4 0 0 4 4 3 0 zinc-ribbon domain zf-H2C2_5 PF13909.6 ORF144857 - 0.47 10.3 0.1 0.47 10.3 0.1 4.4 4 0 0 4 4 4 0 C2H2-type zinc-finger domain CpXC PF14353.6 ORF144857 - 0.57 10.2 5.2 7.4 6.6 1.3 2.5 1 1 0 2 2 2 0 CpXC protein Zn_Tnp_IS1595 PF12760.7 ORF144857 - 3.5 7.7 13.0 0.11 12.5 4.2 2.6 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Ank_2 PF12796.7 ORF140499 - 7.6e-08 32.8 0.3 0.00055 20.5 0.3 3.2 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF140499 - 0.0008 19.7 0.6 1.3 9.8 0.0 4.0 4 0 0 4 4 4 1 Ankyrin repeat Herpes_UL36 PF03586.13 ORF140499 - 0.01 15.2 0.0 0.024 14.0 0.0 1.6 2 0 0 2 2 2 0 Herpesvirus UL36 tegument protein Ank_5 PF13857.6 ORF140499 - 0.011 16.1 0.4 0.22 11.9 0.1 3.2 3 1 0 3 3 3 0 Ankyrin repeats (many copies) Ank_4 PF13637.6 ORF140499 - 0.033 14.8 1.1 15 6.3 0.0 3.5 3 1 0 3 3 3 0 Ankyrin repeats (many copies) KKLCAg1 PF15204.6 ORF140244 - 0.81 9.8 0.1 0.81 9.8 0.1 2.7 3 0 0 3 3 3 0 Kita-kyushu lung cancer antigen 1 Macro PF01661.21 ORF140019 - 6.3e-16 58.5 0.0 1.7e-15 57.1 0.0 1.8 1 0 0 1 1 1 1 Macro domain RNase_H2_suC PF08615.11 ORF140019 - 0.0023 18.1 0.5 0.0036 17.5 0.5 1.4 1 0 0 1 1 1 1 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) DUF2759 PF10958.8 ORF140019 - 0.064 13.0 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) PSCyt3 PF07627.11 ORF140019 - 0.16 12.2 0.8 0.44 10.8 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1588) PI3K_1B_p101 PF10486.9 ORF140019 - 1.1 6.9 12.7 1.5 6.5 12.7 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit Peptidase_C1 PF00112.23 ORF138534 - 5.6e-47 160.6 10.1 6.5e-47 160.4 10.1 1.0 1 0 0 1 1 1 1 Papain family cysteine protease RRM_1 PF00076.22 ORF133881 - 0.0086 15.9 0.0 0.92 9.4 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LepB_N PF18640.1 ORF133881 - 0.087 12.4 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 LepB N-terminal domain DUF4651 PF15513.6 ORF133881 - 0.11 12.4 0.0 0.27 11.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4651) ABC_tran PF00005.27 ORF133877 - 7.3e-30 104.3 0.0 1.2e-29 103.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF133877 - 2.8e-07 30.2 0.5 4.6e-05 22.9 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF133877 - 0.00079 19.5 0.2 0.0028 17.7 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF133877 - 0.0028 17.8 0.0 0.0079 16.3 0.0 1.8 2 0 0 2 2 2 1 Immunity protein 58 AAA_29 PF13555.6 ORF133877 - 0.0078 15.9 0.0 0.023 14.4 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF133877 - 0.018 15.3 0.3 0.057 13.7 0.3 1.9 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 ORF133877 - 0.019 15.4 0.2 0.28 11.6 0.2 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 ORF133877 - 0.019 14.9 0.4 0.4 10.6 0.0 2.3 2 0 0 2 2 2 0 NTPase DUF87 PF01935.17 ORF133877 - 0.02 15.0 0.0 0.052 13.6 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_5 PF07728.14 ORF133877 - 0.031 14.3 0.3 13 5.8 0.0 2.9 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) ATP_bind_1 PF03029.17 ORF133877 - 0.04 13.7 0.1 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF133877 - 0.04 12.9 0.0 0.07 12.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_23 PF13476.6 ORF133877 - 0.042 14.3 1.5 0.085 13.3 0.1 2.0 2 1 0 2 2 2 0 AAA domain CbiA PF01656.23 ORF133877 - 0.044 13.9 0.1 0.084 12.9 0.1 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF815 PF05673.13 ORF133877 - 0.044 12.9 0.0 0.064 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_18 PF13238.6 ORF133877 - 0.049 14.2 0.2 0.077 13.5 0.2 1.5 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF133877 - 0.053 13.9 0.5 1.3 9.4 0.0 2.3 2 0 0 2 2 2 0 RNA helicase AAA_25 PF13481.6 ORF133877 - 0.087 12.4 0.0 0.29 10.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF3581 PF12119.8 ORF133877 - 0.087 12.2 0.0 0.36 10.2 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3581) AAA_24 PF13479.6 ORF133877 - 0.087 12.5 0.2 0.15 11.8 0.2 1.4 1 1 0 1 1 1 0 AAA domain HATPase_c_4 PF13749.6 ORF133877 - 0.14 12.3 0.1 0.46 10.6 0.0 1.8 2 0 0 2 2 2 0 Putative ATP-dependent DNA helicase recG C-terminal AAA_30 PF13604.6 ORF133877 - 0.16 11.7 0.3 0.75 9.5 0.3 1.9 1 1 0 1 1 1 0 AAA domain Beta-lactamase PF00144.24 ORF132302 - 2.7e-08 33.4 0.1 3.5e-08 33.1 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase MORN PF02493.20 ORF132088 - 4.8e-15 54.5 29.8 3.8e-06 26.5 0.3 6.9 8 0 0 8 8 8 3 MORN repeat DUF3833 PF12915.7 ORF132088 - 0.13 11.9 0.2 0.19 11.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3833) Glycos_transf_2 PF00535.26 ORF131774 - 1.5e-33 116.0 0.0 1.8e-33 115.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 ORF131774 - 6.1e-12 45.9 0.0 7.3e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 ORF131774 - 4e-05 23.2 0.0 0.00024 20.6 0.0 1.9 1 1 1 2 2 2 2 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 ORF131774 - 4.1e-05 23.2 0.0 0.00012 21.7 0.0 1.7 1 1 0 2 2 2 1 Glycosyltransferase like family 2 ADK PF00406.22 ORF130703 - 5.2e-56 188.9 0.0 6.4e-56 188.7 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF130703 - 1e-22 81.0 0.1 2.7e-22 79.7 0.0 1.6 2 0 0 2 2 2 1 AAA domain ADK_lid PF05191.14 ORF130703 - 4.1e-17 61.9 0.0 9e-17 60.8 0.0 1.6 1 0 0 1 1 1 1 Adenylate kinase, active site lid AAA_18 PF13238.6 ORF130703 - 4.1e-06 27.4 0.0 9.2e-06 26.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF130703 - 5.7e-06 26.6 0.0 1.9e-05 24.9 0.0 1.8 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 ORF130703 - 0.004 16.6 0.0 0.0063 15.9 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Hydin_ADK PF17213.3 ORF130703 - 0.033 14.5 0.4 1.2 9.4 0.1 2.4 1 1 1 2 2 2 0 Hydin Adenylate kinase-like domain Thymidylate_kin PF02223.17 ORF130703 - 0.06 13.0 0.0 2.6 7.7 0.0 2.5 2 1 1 3 3 3 0 Thymidylate kinase Zeta_toxin PF06414.12 ORF130703 - 0.096 11.9 0.0 0.19 11.0 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin Proteasome PF00227.26 ORF12952 - 4e-44 150.4 0.8 5.2e-44 150.0 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF12952 - 5.8e-05 22.7 0.0 0.00011 21.8 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature YfbU PF03887.14 ORF129106 - 1.1e-68 230.5 3.0 1.3e-68 230.2 3.0 1.1 1 0 0 1 1 1 1 YfbU domain Cupin_4 PF08007.12 ORF129028 - 1.9e-10 40.7 0.0 2.6e-10 40.3 0.0 1.2 1 0 0 1 1 1 1 Cupin superfamily protein Cupin_8 PF13621.6 ORF129028 - 0.00015 21.6 0.0 0.00024 20.9 0.0 1.4 1 0 0 1 1 1 1 Cupin-like domain Cupin_2 PF07883.11 ORF129028 - 0.00029 20.5 0.0 0.00057 19.5 0.0 1.4 1 0 0 1 1 1 1 Cupin domain Helicase_C PF00271.31 ORF122131 - 1.8e-24 86.2 0.0 3e-24 85.5 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain tRNA-synt_1b PF00579.25 ORF122131 - 0.048 13.0 0.0 0.06 12.7 0.0 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) DUF3973 PF13119.6 ORF11794 - 0.057 13.5 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) BaffR-Tall_bind PF09256.10 ORF117070 - 0.25 11.1 2.7 0.2 11.5 0.6 2.0 2 0 0 2 2 2 0 BAFF-R, TALL-1 binding ABC_tran PF00005.27 ORF115090 - 4.7e-29 101.7 0.0 8.5e-29 100.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF115090 - 3.9e-07 29.7 1.7 3.2e-05 23.5 0.5 2.1 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain NTPase_1 PF03266.15 ORF115090 - 0.00058 19.8 0.7 0.4 10.6 0.0 2.4 2 0 0 2 2 2 2 NTPase MMR_HSR1 PF01926.23 ORF115090 - 0.00084 19.4 0.1 0.0028 17.7 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF115090 - 0.0082 15.9 0.0 0.023 14.4 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain FKBP_N_2 PF18023.1 ORF115090 - 0.011 15.8 0.3 0.022 14.8 0.3 1.5 1 0 0 1 1 1 0 BDBT FKBP like N-terminal AAA PF00004.29 ORF115090 - 0.012 16.1 0.3 0.15 12.5 0.3 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF87 PF01935.17 ORF115090 - 0.023 14.8 0.0 0.053 13.6 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_18 PF13238.6 ORF115090 - 0.03 14.9 0.1 0.053 14.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 ORF115090 - 0.037 14.5 0.4 0.089 13.3 0.1 1.7 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 ORF115090 - 0.038 13.8 0.2 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 ORF115090 - 0.04 13.6 0.0 0.063 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF115090 - 0.043 12.8 0.0 0.072 12.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 ORF115090 - 0.046 13.8 0.0 0.071 13.2 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RNA_helicase PF00910.22 ORF115090 - 0.066 13.6 1.2 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase Imm58 PF15581.6 ORF115090 - 0.11 12.6 0.1 0.26 11.4 0.1 1.7 1 1 0 1 1 1 0 Immunity protein 58 AAA_5 PF07728.14 ORF115090 - 0.12 12.4 0.3 21 5.1 0.1 2.7 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 ORF115090 - 0.13 11.5 0.2 0.57 9.4 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin AAA_25 PF13481.6 ORF115090 - 0.14 11.8 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF115090 - 0.24 11.7 0.9 1 9.6 0.9 2.1 1 1 0 1 1 1 0 AAA domain LamB_YcsF PF03746.16 ORF108201 - 1.6e-94 316.1 0.6 1.8e-94 315.9 0.6 1.0 1 0 0 1 1 1 1 LamB/YcsF family Transp_cyt_pur PF02133.15 ORF102188 - 7.6e-43 146.9 21.7 8.5e-43 146.7 21.7 1.0 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin Rhodanese PF00581.20 ORF100992 - 3.8e-14 53.1 0.0 8.7e-14 51.9 0.0 1.6 1 0 0 1 1 1 1 Rhodanese-like domain ABC_tran PF00005.27 ORF100783 - 4e-29 101.9 0.0 6.5e-29 101.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF100783 - 3.4e-07 29.9 0.3 5.9e-05 22.6 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 ORF100783 - 0.00081 19.5 0.3 0.0016 18.5 0.3 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase Imm58 PF15581.6 ORF100783 - 0.0035 17.4 0.0 0.0085 16.2 0.0 1.6 1 0 0 1 1 1 1 Immunity protein 58 AAA_29 PF13555.6 ORF100783 - 0.0089 15.8 0.0 0.023 14.4 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain NTPase_1 PF03266.15 ORF100783 - 0.022 14.7 0.5 0.38 10.7 0.1 2.3 2 0 0 2 2 2 0 NTPase DUF87 PF01935.17 ORF100783 - 0.024 14.7 0.0 0.053 13.6 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain AAA PF00004.29 ORF100783 - 0.027 14.9 0.1 0.32 11.4 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF100783 - 0.033 14.2 0.3 13 5.8 0.0 2.8 2 1 1 3 3 3 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 ORF100783 - 0.036 14.6 0.1 0.063 13.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 ORF100783 - 0.041 13.7 0.1 0.63 9.8 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF100783 - 0.041 12.8 0.0 0.07 12.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 ORF100783 - 0.045 13.8 0.1 0.093 12.8 0.1 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_23 PF13476.6 ORF100783 - 0.049 14.1 0.9 0.089 13.3 0.1 1.7 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF100783 - 0.054 13.9 0.5 1.3 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA_24 PF13479.6 ORF100783 - 0.088 12.5 0.4 0.15 11.8 0.3 1.4 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF100783 - 0.088 12.4 0.0 0.29 10.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 ORF100783 - 0.12 12.1 0.1 0.35 10.5 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF100783 - 0.16 12.2 1.0 0.93 9.8 1.0 2.1 1 1 0 1 1 1 0 AAA domain Kelch_1 PF01344.25 ORF100125 - 1.9e-11 43.3 0.5 9.3e-05 21.9 0.0 3.2 3 0 0 3 3 3 2 Kelch motif Kelch_6 PF13964.6 ORF100125 - 2.4e-08 34.0 1.2 0.00058 20.1 0.0 3.5 1 1 2 3 3 3 2 Kelch motif Kelch_4 PF13418.6 ORF100125 - 6e-07 29.4 0.0 0.0034 17.4 0.0 2.4 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF100125 - 0.0065 16.7 0.0 0.71 10.2 0.0 2.3 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_5 PF13854.6 ORF100125 - 0.0079 16.2 0.2 0.24 11.4 0.1 2.4 2 0 0 2 2 2 1 Kelch motif Ig_Tie2_1 PF10430.9 ORF100125 - 0.0082 16.5 0.1 0.16 12.4 0.0 2.2 2 0 0 2 2 2 1 Tie-2 Ig-like domain 1 Kelch_2 PF07646.15 ORF100125 - 0.15 12.1 1.2 1.3 9.1 1.2 2.6 2 1 0 2 2 2 0 Kelch motif Strumpellin PF10266.9 ORF100108 - 2.2e-21 75.4 0.1 2.5e-21 75.2 0.1 1.1 1 0 0 1 1 1 1 Hereditary spastic paraplegia protein strumpellin Vfa1 PF08432.10 ORF100108 - 0.0015 18.9 3.1 0.002 18.5 3.1 1.2 1 0 0 1 1 1 1 AAA-ATPase Vps4-associated protein 1 AA_permease PF00324.21 NODE_29881_length_728_cov_3.290043_g23590_i0reverse_frame_1 - 7e-26 90.9 11.4 9.5e-26 90.4 11.4 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 NODE_29881_length_728_cov_3.290043_g23590_i0reverse_frame_1 - 1.8e-05 23.8 9.2 2.6e-05 23.3 9.2 1.2 1 0 0 1 1 1 1 Amino acid permease zf-CRD PF17979.1 NODE_29860_length_728_cov_198.222222_g23570_i0forward_frame_1 - 0.63 10.1 6.9 2.7 8.1 1.5 2.3 2 0 0 2 2 2 0 Cysteine rich domain with multizinc binding regions Ras PF00071.22 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 7.2e-49 165.5 0.0 9e-49 165.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 7.8e-30 103.6 0.0 1.3e-29 102.9 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 2.1e-10 40.3 0.0 3e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.0028 17.7 0.0 0.0045 17.0 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.0043 16.3 1.4 1.8 7.7 0.1 2.8 2 1 1 3 3 3 2 G-protein alpha subunit ArgoMid PF16487.5 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.0068 16.6 0.1 0.013 15.7 0.1 1.4 1 0 0 1 1 1 1 Mid domain of argonaute RNA_helicase PF00910.22 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.01 16.2 0.4 0.24 11.8 0.4 2.3 1 1 0 1 1 1 0 RNA helicase Gtr1_RagA PF04670.12 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.012 14.9 0.0 0.017 14.5 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region AAA_7 PF12775.7 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.069 12.7 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Septin PF00735.18 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.072 12.4 0.1 0.19 11.0 0.0 1.7 2 0 0 2 2 2 0 Septin RsgA_GTPase PF03193.16 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.12 12.3 0.1 9.4 6.1 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase Pox_A32 PF04665.12 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.15 11.5 0.2 0.34 10.3 0.0 1.6 2 0 0 2 2 2 0 Poxvirus A32 protein ATP_bind_1 PF03029.17 NODE_29787_length_730_cov_43.858993_g23507_i0reverse_frame_3 - 0.21 11.3 0.1 14 5.3 0.2 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein ERGIC_N PF13850.6 NODE_29772_length_730_cov_97.666187_g23492_i0reverse_frame_3 - 0.0001 22.5 0.2 0.00025 21.3 0.2 1.6 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Plasmo_rep PF12135.8 NODE_29772_length_730_cov_97.666187_g23492_i0forward_frame_3 - 0.41 10.2 6.5 0.11 12.1 2.0 2.3 2 0 0 2 2 2 0 Plasmodium repeat family Paired_CXXCH_1 PF09699.10 NODE_29771_length_730_cov_97.717986_g23491_i0reverse_frame_2 - 0.0055 16.4 1.7 0.18 11.5 0.1 2.5 2 0 0 2 2 2 2 Doubled CXXCH motif (Paired_CXXCH_1) Mga PF05043.13 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.035 14.7 2.8 0.035 14.7 2.8 2.0 2 1 0 2 2 2 0 Mga helix-turn-helix domain AAA_23 PF13476.6 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.069 13.6 19.3 1.8 9.0 16.4 2.0 1 1 1 2 2 2 0 AAA domain DUF4407 PF14362.6 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.18 11.1 10.8 0.1 11.9 9.0 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) KxDL PF10241.9 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.34 11.2 13.5 0.79 10.0 6.9 2.8 2 2 0 2 2 2 0 Uncharacterized conserved protein CHD5 PF04420.14 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 0.56 10.0 13.1 0.14 12.0 8.5 2.1 2 0 0 2 2 2 0 CHD5-like protein MatP_C PF17414.2 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 3.8 7.8 8.4 2.1 8.6 2.5 3.1 3 1 0 3 3 3 0 MatP C-terminal ribbon-helix-helix domain Com_YlbF PF06133.11 NODE_29771_length_730_cov_97.717986_g23491_i0forward_frame_3 - 3.9 8.1 25.0 98 3.6 0.1 3.4 1 1 2 3 3 3 0 Control of competence regulator ComK, YlbF/YmcA VWA PF00092.28 NODE_29767_length_730_cov_118.761151_g23465_i1forward_frame_3 - 5.7e-05 23.4 1.1 0.00014 22.1 0.4 2.0 1 1 1 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 NODE_29767_length_730_cov_118.761151_g23465_i1forward_frame_3 - 0.0008 20.0 0.0 0.0018 18.9 0.0 1.6 1 1 0 1 1 1 1 von Willebrand factor type A domain HSF_DNA-bind PF00447.17 NODE_29767_length_730_cov_118.761151_g23465_i1forward_frame_2 - 0.051 14.2 0.4 0.1 13.2 0.4 1.6 1 0 0 1 1 1 0 HSF-type DNA-binding zf-TRAF PF02176.18 NODE_29749_length_730_cov_3180.500719_g4420_i2reverse_frame_2 - 0.035 14.8 0.3 0.14 12.8 0.3 2.0 2 0 0 2 2 2 0 TRAF-type zinc finger GST_C_6 PF17171.4 NODE_29749_length_730_cov_3180.500719_g4420_i2reverse_frame_2 - 0.05 13.4 0.3 0.28 11.0 0.0 2.4 3 0 0 3 3 3 0 Glutathione S-transferase, C-terminal domain Phage_int_SAM_4 PF13495.6 NODE_29749_length_730_cov_3180.500719_g4420_i2forward_frame_3 - 0.025 15.0 0.2 0.077 13.5 0.1 1.8 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks87.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks87.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks87.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks87.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- adh_short PF00106.25 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 7.8e-29 100.5 0.0 9e-29 100.3 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 7.8e-14 51.8 0.0 1.1e-13 51.3 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 0.00019 21.4 0.0 0.00026 20.9 0.0 1.2 1 0 0 1 1 1 1 KR domain ApbA PF02558.16 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 0.065 12.9 0.0 0.12 12.1 0.0 1.5 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF1776 PF08643.10 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 0.081 12.3 0.0 0.16 11.3 0.0 1.5 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) TrkA_C PF02080.21 NODE_29720_length_731_cov_820.317529_g15023_i2forward_frame_3 - 0.18 11.7 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 TrkA-C domain DUF4211 PF13926.6 NODE_29691_length_732_cov_169.173601_g23431_i0reverse_frame_2 - 0.074 13.1 0.1 0.26 11.3 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4211) DUF2709 PF10915.8 NODE_29691_length_732_cov_169.173601_g23431_i0forward_frame_2 - 0.082 12.2 1.1 2.7 7.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2709) LPAM_1 PF08139.12 NODE_29688_length_732_cov_187.025825_g23428_i0reverse_frame_2 - 0.14 12.7 2.2 0.33 11.5 2.2 1.7 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site DUF1115 PF06544.12 NODE_29665_length_732_cov_2608.100430_g23409_i0reverse_frame_3 - 0.2 11.8 5.0 0.35 10.9 5.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1115) Ribosomal_S24e PF01282.19 NODE_29665_length_732_cov_2608.100430_g23409_i0reverse_frame_2 - 1.3e-25 89.1 0.2 1.3e-25 89.1 0.2 2.1 2 0 0 2 2 2 1 Ribosomal protein S24e NPCC PF08058.11 NODE_29665_length_732_cov_2608.100430_g23409_i0forward_frame_3 - 2.5 8.2 13.6 0.36 10.9 8.6 2.0 1 1 1 2 2 2 0 Nuclear pore complex component DUF4834 PF16118.5 ORF99726 - 0.0081 17.1 0.9 0.0081 17.1 0.9 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4834) peroxidase PF00141.23 ORF97436 - 2.1e-28 99.6 0.0 3.9e-28 98.7 0.0 1.3 1 1 0 1 1 1 1 Peroxidase DUF2681 PF10883.8 ORF97337 - 0.045 14.2 1.2 0.11 12.9 1.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) Rrp15p PF07890.12 ORF97337 - 0.074 13.4 3.8 0.16 12.3 3.8 1.5 1 0 0 1 1 1 0 Rrp15p PEARLI-4 PF05278.12 ORF97337 - 0.083 12.5 5.6 0.12 11.9 5.6 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) TMF_TATA_bd PF12325.8 ORF97337 - 0.15 12.3 7.7 0.31 11.3 7.7 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Pkinase PF00069.25 ORF85462 - 2.5e-31 109.0 0.0 2.3e-29 102.6 0.0 2.1 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF85462 - 1e-16 61.0 0.1 4.2e-14 52.4 0.1 2.1 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF85462 - 3.4e-06 26.6 0.0 0.00026 20.4 0.0 2.2 2 0 0 2 2 2 2 Kinase-like Pkinase_fungal PF17667.1 ORF85462 - 0.00089 18.1 0.0 0.0011 17.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF85462 - 0.018 15.0 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family RIO1 PF01163.22 ORF85462 - 0.039 13.5 0.2 0.059 13.0 0.2 1.2 1 0 0 1 1 1 0 RIO1 family Osmo_CC PF08946.10 ORF85462 - 0.087 13.1 1.6 0.087 13.1 1.6 2.2 3 0 0 3 3 3 0 Osmosensory transporter coiled coil DUF16 PF01519.16 ORF84922 - 0.1 13.1 4.2 0.34 11.4 4.2 1.9 1 1 0 1 1 1 0 Protein of unknown function DUF16 CLN5 PF15014.6 ORF81675 - 0.04 13.6 0.2 0.082 12.6 0.2 1.4 1 1 0 1 1 1 0 Ceroid-lipofuscinosis neuronal protein 5 DDE_3 PF13358.6 ORF76877 - 0.011 15.5 0.0 0.017 14.9 0.0 1.5 1 0 0 1 1 1 0 DDE superfamily endonuclease Pkinase PF00069.25 ORF75675 - 4.4e-12 45.9 0.0 5.5e-12 45.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF75675 - 3.1e-06 26.7 0.0 4.2e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase YbaB_DNA_bd PF02575.16 ORF73161 - 1.3e-11 44.6 0.1 1.9e-11 44.0 0.1 1.3 1 0 0 1 1 1 1 YbaB/EbfC DNA-binding family Aida_N PF08910.10 ORF73161 - 0.029 14.8 0.1 0.053 13.9 0.1 1.5 1 1 0 1 1 1 0 Aida N-terminus DUF4054 PF13262.6 ORF73161 - 0.031 14.3 4.4 1.3 9.1 0.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4054) FB_lectin PF07367.11 ORF73161 - 0.097 12.6 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Fungal fruit body lectin CLN3 PF02487.17 ORF70552 - 7.2e-14 51.6 6.3 8.7e-14 51.4 6.3 1.1 1 0 0 1 1 1 1 CLN3 protein Helicase_IV_N PF12462.8 ORF69797 - 0.49 10.3 8.9 3 7.8 3.2 2.3 1 1 1 2 2 2 0 DNA helicase IV / RNA helicase N terminal RsfS PF02410.15 ORF6800 - 8.5e-06 26.1 0.0 1.4e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation Baseplate PF16774.5 ORF6800 - 0.049 13.5 3.2 0.68 9.8 2.4 2.2 2 0 0 2 2 2 0 Baseplate protein Ndc1_Nup PF09531.10 ORF67812 - 9.3 4.8 11.9 11 4.5 11.9 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Copine PF07002.16 ORF64514 - 7.3e-12 45.2 0.1 1e-11 44.7 0.1 1.1 1 0 0 1 1 1 1 Copine DUF3211 PF11485.8 ORF64514 - 0.053 13.7 0.1 0.16 12.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3211) S-AdoMet_synt_C PF02773.16 ORF62764 - 0.059 13.4 0.3 0.18 11.8 0.1 1.8 1 1 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain DUF1664 PF07889.12 ORF62764 - 0.1 12.7 1.0 0.23 11.5 0.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) NPBW PF15180.6 ORF62163 - 0.019 14.8 1.2 0.031 14.1 0.3 1.8 1 1 1 2 2 2 0 Neuropeptides B and W FOP_dimer PF09398.10 ORF61594 - 6.3e-15 55.2 0.1 1.3e-14 54.2 0.1 1.5 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF61594 - 9.2e-07 27.8 0.0 1.5e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 LisH Poxvirus_B22R PF04395.12 ORF61295 - 0.15 11.6 0.8 0.21 11.1 0.8 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein Rop PF01815.16 ORF61263 - 1e-33 115.0 2.0 1.5e-33 114.4 2.0 1.3 1 0 0 1 1 1 1 Rop protein MFS_1 PF07690.16 ORF61263 - 0.00019 20.5 11.3 0.00043 19.3 10.7 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF61263 - 0.0046 15.6 4.6 0.007 15.0 4.6 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein Nuc_H_symport PF03825.16 ORF61263 - 0.0071 15.4 1.1 0.0097 14.9 1.1 1.1 1 0 0 1 1 1 1 Nucleoside H+ symporter MFS_1_like PF12832.7 ORF61263 - 0.16 10.8 2.7 0.2 10.4 2.7 1.1 1 0 0 1 1 1 0 MFS_1 like family DUF4231 PF14015.6 ORF61263 - 0.36 11.3 2.4 1.6 9.2 1.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) VIT1 PF01988.19 ORF61263 - 2.4 8.0 8.8 1.2 9.0 6.1 1.7 2 0 0 2 2 2 0 VIT family Urocanase_N PF17391.2 ORF61197 - 0.017 14.8 0.3 60 3.3 0.0 3.7 1 1 3 4 4 4 0 Urocanase N-terminal domain DUF1917 PF08939.10 ORF61197 - 0.92 9.3 2.3 34 4.2 0.1 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF1917) Rop PF01815.16 ORF57534 - 1e-33 115.0 2.0 1.5e-33 114.4 2.0 1.3 1 0 0 1 1 1 1 Rop protein MFS_1 PF07690.16 ORF57534 - 0.00019 20.5 11.3 0.00043 19.3 10.7 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF57534 - 0.0046 15.6 4.6 0.007 15.0 4.6 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein Nuc_H_symport PF03825.16 ORF57534 - 0.0071 15.4 1.1 0.0097 14.9 1.1 1.1 1 0 0 1 1 1 1 Nucleoside H+ symporter MFS_1_like PF12832.7 ORF57534 - 0.16 10.8 2.7 0.2 10.4 2.7 1.1 1 0 0 1 1 1 0 MFS_1 like family DUF4231 PF14015.6 ORF57534 - 0.36 11.3 2.4 1.6 9.2 1.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) VIT1 PF01988.19 ORF57534 - 2.4 8.0 8.8 1.2 9.0 6.1 1.7 2 0 0 2 2 2 0 VIT family Poxvirus_B22R PF04395.12 ORF57520 - 0.15 11.6 0.8 0.21 11.1 0.8 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein NAD_binding_4 PF07993.12 ORF54403 - 4.5e-08 32.6 0.0 2.4e-06 26.9 0.0 2.4 1 1 1 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 ORF54403 - 0.00015 21.8 0.0 0.00037 20.4 0.0 1.8 2 1 0 2 2 2 1 NAD(P)H-binding Epimerase PF01370.21 ORF54403 - 0.00024 20.7 0.0 0.0003 20.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 ORF54403 - 0.027 13.6 0.0 0.043 13.0 0.0 1.3 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 ORF54403 - 0.067 12.2 0.0 0.12 11.4 0.0 1.4 1 1 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Cob_adeno_trans PF01923.18 ORF54403 - 0.12 12.5 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Cobalamin adenosyltransferase ERM PF00769.19 ORF53400 - 0.0096 15.8 2.4 0.0096 15.8 2.4 2.0 1 1 1 2 2 2 1 Ezrin/radixin/moesin family HEPN_AbiU2 PF18734.1 ORF53400 - 0.027 14.0 8.0 0.0068 15.9 4.2 1.9 2 1 0 2 2 2 0 AbiU2 FOP_dimer PF09398.10 ORF51122 - 6.3e-15 55.2 0.1 1.3e-14 54.2 0.1 1.5 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 ORF51122 - 9.2e-07 27.8 0.0 1.5e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 LisH DUF3951 PF13131.6 ORF50209 - 0.078 13.2 1.6 0.078 13.2 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3951) Mit_ribos_Mrp51 PF11709.8 ORF4924 - 0.086 12.4 0.3 0.12 11.9 0.3 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit EF-hand_6 PF13405.6 ORF48856 - 0.0035 17.2 0.3 0.027 14.4 0.1 2.6 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF48856 - 0.05 14.1 0.5 0.13 12.7 0.2 2.0 2 0 0 2 2 2 0 EF-hand domain pair SPOR PF05036.13 ORF48856 - 0.12 12.8 0.2 0.12 12.8 0.2 1.6 2 0 0 2 2 2 0 Sporulation related domain EF-hand_1 PF00036.32 ORF48856 - 0.32 10.7 2.8 0.6 9.8 0.3 2.6 3 0 0 3 3 3 0 EF hand Stc1 PF12898.7 ORF46710 - 0.0031 18.0 2.3 6.7 7.3 2.3 3.5 1 1 0 1 1 1 1 Stc1 domain Tom6 PF17112.5 ORF46710 - 0.0057 16.1 5.5 3.1 7.4 0.1 3.7 4 0 0 4 4 4 3 Mitochondrial import receptor subunit Tom6, fungal dUTPase PF00692.19 ORF46710 - 0.036 13.8 0.0 8.3 6.1 0.0 2.2 2 0 0 2 2 2 0 dUTPase zf_PR_Knuckle PF18445.1 ORF46710 - 0.15 11.9 5.7 51 3.8 0.1 4.3 4 0 0 4 4 4 0 PR zinc knuckle motif Argos PF11581.8 ORF4633 - 0.22 11.5 4.1 0.26 11.3 0.2 2.6 1 1 1 3 3 3 0 Antagonist of EGFR signalling, Argos ThiF PF00899.21 ORF44462 - 1.4e-12 47.6 0.2 2e-12 47.0 0.1 1.3 1 1 0 1 1 1 1 ThiF family Epimerase_2 PF02350.19 ORF44462 - 0.18 10.6 0.0 0.24 10.2 0.0 1.1 1 0 0 1 1 1 0 UDP-N-acetylglucosamine 2-epimerase PUF PF00806.19 ORF41081 - 1.5e-30 103.1 0.6 4.4e-06 26.1 0.0 5.2 5 0 0 5 5 5 5 Pumilio-family RNA binding repeat DUF1075 PF06388.11 ORF41081 - 0.11 12.5 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1075) CBP_BcsF PF11120.8 ORF3611 - 0.85 9.8 3.9 2 8.6 3.9 1.6 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsF UPF0228 PF05727.11 ORF35432 - 0.099 12.5 1.5 2.1 8.2 1.5 2.2 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0228) Atg14 PF10186.9 ORF3338 - 0.059 12.5 9.7 0.07 12.2 9.7 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Mod_r PF07200.13 ORF3338 - 0.071 13.2 21.1 0.17 12.0 20.8 1.7 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein bZIP_1 PF00170.21 ORF3338 - 0.1 12.7 13.2 0.059 13.5 5.6 2.8 1 1 2 3 3 3 0 bZIP transcription factor FRD2 PF03197.13 ORF3338 - 0.16 12.3 2.6 1 9.7 0.7 2.4 1 1 0 2 2 2 0 Bacteriophage FRD2 protein DUF4407 PF14362.6 ORF3338 - 0.17 11.2 6.7 0.2 11.0 6.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Ssl1 PF04056.14 ORF3338 - 0.52 10.1 5.3 0.83 9.4 5.3 1.3 1 0 0 1 1 1 0 Ssl1-like FapA PF03961.13 ORF3338 - 0.54 8.8 9.9 0.67 8.5 9.9 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A Exonuc_VII_L PF02601.15 ORF3338 - 1.1 8.8 9.9 1.4 8.5 9.9 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit YabA PF06156.13 ORF3338 - 2.1 9.1 20.0 1 10.1 13.1 2.3 1 1 1 2 2 2 0 Initiation control protein YabA TMPIT PF07851.13 ORF3338 - 3.3 6.9 16.7 10 5.3 16.5 1.8 1 1 0 1 1 1 0 TMPIT-like protein CENP-H PF05837.12 ORF3338 - 4.2 7.8 19.9 0.44 11.0 13.3 2.2 1 1 1 2 2 2 0 Centromere protein H (CENP-H) UCH PF00443.29 ORF3141 - 5.4e-05 22.8 0.0 7.5e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase C1_2 PF03107.16 ORF3141 - 0.012 15.9 3.4 0.03 14.6 3.4 1.7 1 0 0 1 1 1 0 C1 domain DUF3945 PF13101.6 ORF3141 - 0.045 13.5 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3945) UCH_1 PF13423.6 ORF3141 - 0.071 12.7 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase PHD_2 PF13831.6 ORF3141 - 0.081 12.5 0.9 0.081 12.5 0.9 2.9 2 1 1 3 3 3 0 PHD-finger zf-H2C2_2 PF13465.6 ORF3141 - 0.25 11.8 3.3 4.3 8.0 0.3 2.6 2 0 0 2 2 2 0 Zinc-finger double domain RecR PF02132.15 ORF3141 - 0.54 9.9 2.7 1.1 8.9 2.7 1.5 1 0 0 1 1 1 0 RecR protein Zf_RING PF16744.5 ORF3141 - 2.4 8.3 5.8 0.52 10.5 2.0 1.9 2 0 0 2 2 2 0 KIAA1045 RING finger EF-hand_6 PF13405.6 ORF30741 - 0.0035 17.2 0.3 0.027 14.4 0.1 2.6 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 ORF30741 - 0.05 14.1 0.5 0.13 12.7 0.2 2.0 2 0 0 2 2 2 0 EF-hand domain pair SPOR PF05036.13 ORF30741 - 0.12 12.8 0.2 0.12 12.8 0.2 1.6 2 0 0 2 2 2 0 Sporulation related domain EF-hand_1 PF00036.32 ORF30741 - 0.32 10.7 2.8 0.6 9.8 0.3 2.6 3 0 0 3 3 3 0 EF hand NtA PF03146.15 ORF25790 - 0.058 13.3 0.0 0.19 11.6 0.0 1.8 2 0 0 2 2 2 0 Agrin NtA domain Complex1_49kDa PF00346.19 ORF21649 - 2e-88 296.0 0.0 2.2e-88 295.9 0.0 1.0 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HATPase_c PF02518.26 ORF20479 - 6.3e-11 42.8 0.0 8.7e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF20479 - 0.012 15.4 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMF PF15185.6 ORF20382 - 0.073 12.8 2.8 0.13 12.0 2.6 1.5 1 1 0 1 1 1 0 Bcl-2-modifying factor, apoptosis Arm PF00514.23 ORF17664 - 4.1e-20 71.1 11.0 0.00023 21.1 0.2 5.6 5 1 0 5 5 5 4 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 ORF17664 - 2.3e-06 27.9 8.8 0.0047 17.3 2.1 3.1 1 1 2 3 3 3 3 HEAT repeats HEAT_EZ PF13513.6 ORF17664 - 3.1e-06 27.6 15.4 0.0013 19.2 0.2 4.0 2 1 0 3 3 3 2 HEAT-like repeat Atx10homo_assoc PF09759.9 ORF17664 - 0.011 15.7 0.0 0.14 12.2 0.0 2.4 2 1 1 3 3 3 0 Spinocerebellar ataxia type 10 protein domain Cnd1 PF12717.7 ORF17664 - 0.046 13.8 0.0 1.2 9.2 0.0 2.2 1 1 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 KAP PF05804.12 ORF17664 - 0.26 9.4 0.0 0.58 8.2 0.0 1.4 1 1 0 1 1 1 0 Kinesin-associated protein (KAP) HEAT PF02985.22 ORF17664 - 0.28 11.6 13.1 39 4.9 0.0 5.6 6 0 0 6 6 6 0 HEAT repeat HEAT_PBS PF03130.16 ORF17664 - 0.35 11.7 19.1 5 8.1 0.0 5.8 5 2 0 5 5 5 0 PBS lyase HEAT-like repeat Pterin_4a PF01329.19 ORF1666 - 3.9e-13 49.4 0.6 6.4e-13 48.7 0.6 1.3 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase Proteasome PF00227.26 ORF152903 - 4e-44 150.4 0.8 5.1e-44 150.0 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF152903 - 4.9e-05 22.9 0.0 0.00011 21.8 0.0 1.6 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature VASt PF16016.5 ORF152639 - 1.6e-06 28.6 1.8 2.6e-06 27.9 1.8 1.4 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain Thioredoxin_6 PF13848.6 ORF152333 - 1.5e-07 31.5 9.4 8.7e-07 29.0 8.1 2.5 1 1 1 2 2 2 1 Thioredoxin-like domain Thioredoxin PF00085.20 ORF152333 - 2.2e-07 30.8 0.2 1.2e-06 28.4 0.0 2.2 3 0 0 3 3 3 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF152333 - 0.00032 21.1 0.1 0.0018 18.7 0.0 2.1 2 0 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 ORF152333 - 0.00055 20.2 2.9 0.013 15.8 0.2 2.8 2 0 0 2 2 2 1 Thioredoxin-like QSOX_Trx1 PF18108.1 ORF152333 - 0.0032 17.6 0.1 0.0094 16.1 0.1 1.8 1 0 0 1 1 1 1 QSOX Trx-like domain HyaE PF07449.11 ORF152333 - 0.012 15.6 0.0 0.024 14.6 0.0 1.6 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Terminase_3C PF17288.2 ORF152333 - 0.046 14.1 1.4 0.052 13.9 0.5 1.7 2 0 0 2 2 2 0 Terminase RNAseH like domain TrbC_Ftype PF09673.10 ORF152333 - 0.087 12.9 0.0 0.49 10.5 0.0 2.1 2 0 0 2 2 2 0 Type-F conjugative transfer system pilin assembly protein TPP_enzyme_N PF02776.18 ORF152333 - 0.23 11.0 0.0 0.38 10.3 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PAS_3 PF08447.12 ORF150149 - 0.022 15.0 0.0 0.079 13.3 0.0 1.9 3 0 0 3 3 3 0 PAS fold Methyltrans_RNA PF04452.14 ORF14969 - 9.6e-74 247.5 0.0 1.1e-73 247.4 0.0 1.0 1 0 0 1 1 1 1 RNA methyltransferase zf-RING_7 PF02591.15 ORF14969 - 0.022 14.9 0.2 0.05 13.8 0.2 1.7 1 0 0 1 1 1 0 C4-type zinc ribbon domain adh_short PF00106.25 ORF149198 - 2.6e-07 30.3 0.0 1.1e-06 28.3 0.0 1.9 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF149198 - 1.4e-05 24.8 0.0 5.2e-05 22.9 0.0 1.9 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase CN_hydrolase PF00795.22 ORF147702 - 1.8e-12 47.2 0.0 7.8e-08 32.0 0.0 2.0 2 0 0 2 2 2 2 Carbon-nitrogen hydrolase DUF4808 PF16066.5 ORF147702 - 0.016 15.8 0.0 0.028 15.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4808) Poxvirus_B22R PF04395.12 ORF146177 - 0.15 11.6 0.8 0.21 11.1 0.8 1.1 1 0 0 1 1 1 0 Poxvirus B22R protein Rop PF01815.16 ORF146164 - 1e-33 115.0 2.0 1.5e-33 114.4 2.0 1.3 1 0 0 1 1 1 1 Rop protein MFS_1 PF07690.16 ORF146164 - 0.00019 20.5 11.3 0.00043 19.3 10.7 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 ORF146164 - 0.0046 15.6 4.6 0.007 15.0 4.6 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein Nuc_H_symport PF03825.16 ORF146164 - 0.0071 15.4 1.1 0.0097 14.9 1.1 1.1 1 0 0 1 1 1 1 Nucleoside H+ symporter MFS_1_like PF12832.7 ORF146164 - 0.16 10.8 2.7 0.2 10.4 2.7 1.1 1 0 0 1 1 1 0 MFS_1 like family DUF4231 PF14015.6 ORF146164 - 0.36 11.3 2.4 1.6 9.2 1.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) VIT1 PF01988.19 ORF146164 - 2.4 8.0 8.8 1.2 9.0 6.1 1.7 2 0 0 2 2 2 0 VIT family ubiquitin PF00240.23 ORF138720 - 7.4e-07 28.8 0.1 1.7e-06 27.7 0.1 1.5 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 ORF138720 - 0.01 16.3 0.0 0.026 14.9 0.0 1.8 1 0 0 1 1 1 0 Ubiquitin-like domain Rad60-SLD PF11976.8 ORF138720 - 0.013 15.3 0.1 0.025 14.4 0.1 1.6 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Tma16 PF11176.8 ORF138720 - 0.16 11.9 1.0 11 5.9 0.1 2.4 1 1 1 2 2 2 0 Translation machinery-associated protein 16 Tim17 PF02466.19 ORF134907 - 0.00036 20.9 0.1 0.00053 20.3 0.1 1.3 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Fer4_19 PF06902.11 ORF134907 - 0.11 12.6 0.1 0.18 11.9 0.1 1.4 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster 5TM-5TMR_LYT PF07694.12 ORF134907 - 0.72 9.3 3.0 0.62 9.6 0.5 2.0 2 0 0 2 2 2 0 5TMR of 5TMR-LYT DUF4670 PF15709.5 ORF130735 - 0.11 11.8 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4670) DUF4678 PF15727.5 ORF128814 - 0.21 10.8 1.5 0.3 10.3 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4678) Oxysterol_BP PF01237.18 ORF126606 - 7.4e-61 206.0 8.1 1.8e-60 204.7 8.1 1.6 1 1 0 1 1 1 1 Oxysterol-binding protein 2OG-FeII_Oxy PF03171.20 ORF123196 - 4.3e-18 65.7 0.0 6.2e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily OTT_1508_deam PF14441.6 ORF121182 - 7 6.7 9.0 4.1 7.5 2.4 3.1 3 0 0 3 3 3 0 OTT_1508-like deaminase TraP PF07296.11 ORF119901 - 0.025 13.7 0.0 0.037 13.2 0.0 1.2 1 0 0 1 1 1 0 TraP protein NnrU PF07298.11 ORF116198 - 0.0013 18.2 1.8 0.061 12.8 0.3 2.1 2 0 0 2 2 2 2 NnrU protein TPR_12 PF13424.6 ORF114494 - 5.3e-21 74.7 9.1 3.3e-11 43.3 0.7 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 ORF114494 - 7.5e-12 44.7 5.8 8e-06 25.5 0.1 4.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF114494 - 5.2e-09 35.9 5.9 0.00025 20.6 0.4 2.0 1 1 1 2 2 2 2 MalT-like TPR region TPR_2 PF07719.17 ORF114494 - 1e-07 31.5 9.9 0.098 12.8 0.2 5.6 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF114494 - 2.9e-07 30.0 7.0 0.028 14.3 0.0 4.8 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF114494 - 3.4e-07 30.0 5.6 0.024 14.8 0.0 5.2 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF114494 - 4.4e-06 26.3 3.2 0.12 12.4 0.1 5.0 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 ORF114494 - 0.00048 20.7 12.8 0.15 13.0 0.6 5.4 4 2 2 6 6 6 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF114494 - 0.024 15.3 3.3 0.024 15.3 3.3 4.2 4 2 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 ORF114494 - 0.3 11.8 5.1 27 5.7 0.1 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF114494 - 0.41 11.2 7.5 2.1 8.9 1.5 3.6 1 1 3 4 4 4 0 Tetratricopeptide repeat ubiquitin PF00240.23 ORF11440 - 2e-33 113.9 0.3 4.1e-33 112.9 0.3 1.5 1 0 0 1 1 1 1 Ubiquitin family Sod_Ni PF09055.11 ORF11440 - 4.2e-29 101.7 0.6 7.1e-29 101.0 0.6 1.3 1 0 0 1 1 1 1 Nickel-containing superoxide dismutase Rad60-SLD PF11976.8 ORF11440 - 2.7e-15 55.9 1.1 5.2e-15 55.0 0.7 1.7 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF11440 - 0.00016 22.1 0.1 0.00058 20.3 0.1 1.9 1 1 0 1 1 1 1 Ubiquitin-like domain MobC PF05713.11 ORF11440 - 0.00077 19.9 2.3 0.0028 18.1 0.1 2.7 2 1 0 3 3 3 1 Bacterial mobilisation protein (MobC) TBK1_ULD PF18396.1 ORF11440 - 0.013 15.4 0.0 0.026 14.4 0.0 1.5 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 ORF11440 - 0.015 15.7 0.5 0.035 14.5 0.0 1.8 2 0 0 2 2 2 0 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF11440 - 0.017 15.3 0.2 0.11 12.6 0.0 2.3 1 1 2 3 3 3 0 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 ORF11440 - 0.083 13.5 0.0 0.2 12.2 0.0 1.6 1 1 0 1 1 1 0 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF11440 - 0.45 10.6 3.6 18 5.4 0.0 2.9 3 0 0 3 3 3 0 Ubiquitin-like domain zf_Hakai PF18408.1 ORF114394 - 0.055 13.2 0.4 0.26 11.0 0.4 2.2 1 0 0 1 1 1 0 C2H2 Hakai zinc finger domain DUF5320 PF17253.2 ORF113602 - 0.027 15.5 0.0 0.074 14.1 0.0 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Neugrin PF06413.11 ORF113602 - 0.037 14.0 0.5 0.14 12.1 0.0 1.9 2 0 0 2 2 2 0 Neugrin DivIC PF04977.15 ORF113602 - 0.24 11.2 1.2 0.43 10.4 1.2 1.3 1 0 0 1 1 1 0 Septum formation initiator Nup54_57_C PF18570.1 ORF113602 - 0.79 9.4 5.0 1.6 8.4 0.6 2.8 2 1 1 3 3 3 0 NUP57/Nup54 C-terminal domain DUF3487 PF11990.8 ORF112480 - 0.091 12.7 0.5 1.1 9.1 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3487) DUF5426 PF17473.2 ORF112480 - 0.6 10.4 7.0 0.45 10.8 0.2 2.8 2 1 1 3 3 3 0 Family of unknown function (DUF5426) Peptidase_C97 PF05903.14 ORF110615 - 0.018 14.9 0.8 0.026 14.4 0.8 1.4 1 1 0 1 1 1 0 PPPDE putative peptidase domain LRAT PF04970.13 ORF110615 - 0.05 13.9 0.4 0.088 13.1 0.4 1.5 1 0 0 1 1 1 0 Lecithin retinol acyltransferase Pentapeptide_2 PF01469.18 ORF110615 - 1.8 8.5 26.5 0.49 10.3 11.7 2.5 1 1 1 2 2 2 0 Pentapeptide repeats (8 copies) Proteasome PF00227.26 ORF109664 - 1.7e-52 177.7 0.0 2e-52 177.4 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF109664 - 2.6e-06 27.0 0.0 5.2e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature ABC_transp_aux PF09822.9 ORF109664 - 0.021 14.3 0.0 0.021 14.3 0.0 1.2 1 0 0 1 1 1 0 ABC-type uncharacterized transport system zf-C2H2 PF00096.26 ORF102831 - 3.4e-13 49.2 20.8 3.7e-07 30.2 1.2 4.2 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF102831 - 1.2e-09 38.2 13.3 0.00026 21.6 0.5 4.0 3 0 0 3 3 3 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF102831 - 6.4e-08 32.7 19.7 7.7e-07 29.3 0.2 4.3 4 1 0 4 4 4 2 Zinc-finger double domain zf-C2H2_11 PF16622.5 ORF102831 - 0.0023 17.6 5.0 0.7 9.7 0.2 2.8 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 ORF102831 - 0.0052 16.8 13.1 0.055 13.5 0.9 3.0 3 0 0 3 3 2 2 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 ORF102831 - 0.0086 16.2 3.0 0.096 12.8 0.3 2.8 2 0 0 2 2 2 1 Zinc ribbon domain GAGA PF09237.11 ORF102831 - 0.01 15.6 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 0 GAGA factor zf-BED PF02892.15 ORF102831 - 0.016 15.2 4.7 0.016 15.2 4.7 3.8 2 1 2 4 4 3 0 BED zinc finger Rpr2 PF04032.16 ORF102831 - 0.017 15.4 10.1 0.064 13.5 0.6 3.4 2 1 1 3 3 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zinc_ribbon_9 PF14369.6 ORF102831 - 0.027 14.7 1.1 5.5 7.3 0.0 3.4 3 0 0 3 3 3 0 zinc-ribbon zf-Di19 PF05605.12 ORF102831 - 0.061 13.6 0.3 0.061 13.6 0.3 3.0 2 1 0 3 3 2 0 Drought induced 19 protein (Di19), zinc-binding zf-C2HC_2 PF13913.6 ORF102831 - 0.084 12.8 4.5 2.1 8.4 0.4 2.8 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-met PF12874.7 ORF102831 - 0.12 12.8 4.0 0.19 12.1 0.0 3.1 3 0 0 3 3 2 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 ORF102831 - 0.12 12.7 10.8 0.92 9.9 1.4 3.6 4 0 0 4 4 3 0 Zinc-finger double-stranded RNA-binding ADK_lid PF05191.14 ORF102831 - 0.28 11.2 3.9 4.7 7.3 0.7 2.7 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-ribbon_3 PF13248.6 ORF102831 - 0.32 10.5 6.0 1.7 8.1 0.1 3.6 4 0 0 4 4 4 0 zinc-ribbon domain PyrI_C PF02748.15 ORF102831 - 0.57 10.1 11.0 0.16 11.9 1.0 3.7 3 1 1 4 4 4 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-Dof PF02701.15 ORF102831 - 0.63 10.2 10.0 1.1 9.4 0.2 2.7 3 0 0 3 3 2 0 Dof domain, zinc finger Zn_Tnp_IS1595 PF12760.7 ORF102831 - 1.7 8.7 7.9 0.36 10.8 3.4 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DZR PF12773.7 ORF102831 - 3 7.9 10.3 1.2 9.2 4.0 3.1 2 1 0 2 2 2 0 Double zinc ribbon zf-CHCC PF10276.9 ORF102831 - 3.2 7.9 8.1 2.1 8.4 1.9 3.0 3 0 0 3 3 3 0 Zinc-finger domain zf_ZIC PF18366.1 ORF102831 - 5.8 7.1 7.3 1.4 9.1 0.3 3.0 2 1 1 3 3 3 0 Zic proteins zinc finger domain zf-C2H2_2 PF12756.7 ORF102831 - 6.8 7.1 18.2 0.27 11.6 1.2 3.0 2 1 1 3 3 2 0 C2H2 type zinc-finger (2 copies) zf-AN1 PF01428.16 ORF102831 - 8.8 6.6 14.5 2.6 8.3 0.6 3.8 3 1 0 3 3 3 0 AN1-like Zinc finger Cadherin-like PF12733.7 ORF100944 - 0.099 13.2 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 Cadherin-like beta sandwich domain Tir_receptor_N PF07490.11 NODE_30043_length_724_cov_70.169811_g23734_i0reverse_frame_1 - 0.4 10.5 2.0 0.54 10.0 2.0 1.3 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) N-terminus PgaD PF13994.6 NODE_29989_length_725_cov_114.156522_g23687_i0reverse_frame_1 - 2.3 8.3 4.5 4.9 7.2 0.1 2.1 2 0 0 2 2 2 0 PgaD-like protein Pkinase PF00069.25 NODE_29989_length_725_cov_114.156522_g23687_i0forward_frame_1 - 9.4e-05 21.9 0.0 0.00013 21.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain HapK PF11639.8 NODE_29989_length_725_cov_114.156522_g23687_i0forward_frame_1 - 0.13 12.8 0.0 0.28 11.7 0.0 1.5 1 0 0 1 1 1 0 REDY-like protein HapK DUF3724 PF12521.8 NODE_29923_length_726_cov_278.083936_g23626_i0forward_frame_1 - 0.01 15.7 20.8 1 9.4 0.3 6.0 5 0 0 5 5 5 0 Protein of unknown function (DUF3724) VPS13_C PF16909.5 NODE_29922_length_726_cov_301.560058_g23625_i0reverse_frame_1 - 0.0004 20.2 0.8 0.00089 19.1 0.8 1.5 1 0 0 1 1 1 1 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 NODE_29922_length_726_cov_301.560058_g23625_i0reverse_frame_1 - 0.018 15.4 0.1 0.1 12.9 0.1 2.1 2 0 0 2 2 2 0 Autophagy-related protein C terminal domain Phage_holin_3_3 PF16083.5 NODE_29922_length_726_cov_301.560058_g23625_i0reverse_frame_1 - 0.061 13.4 0.5 0.11 12.7 0.5 1.3 1 0 0 1 1 1 0 LydA holin phage, holin superfamily III Mito_carr PF00153.27 NODE_29922_length_726_cov_301.560058_g23625_i0reverse_frame_1 - 0.13 12.2 0.6 0.37 10.7 0.3 2.0 1 1 0 1 1 1 0 Mitochondrial carrier protein Casein PF00363.18 NODE_29893_length_727_cov_394.846821_g23351_i1forward_frame_3 - 0.00022 21.5 1.7 0.00044 20.6 1.4 1.6 2 0 0 2 2 2 1 Casein PPR PF01535.20 NODE_29860_length_728_cov_198.222222_g23570_i0forward_frame_3 - 0.048 13.9 0.8 15 6.1 0.1 2.6 2 0 0 2 2 2 0 PPR repeat TEBP_beta PF07404.11 NODE_29835_length_729_cov_2.425072_g23551_i0forward_frame_2 - 1.1e-17 64.5 0.8 1.6e-17 64.0 0.8 1.4 1 1 0 1 1 1 1 Telomere-binding protein beta subunit (TEBP beta) zf-RING_10 PF16685.5 NODE_29834_length_729_cov_2.599424_g23550_i0forward_frame_3 - 0.047 13.8 0.7 0.047 13.8 0.7 3.3 3 1 1 4 4 4 0 zinc RING finger of MSL2 C1_1 PF00130.22 NODE_29834_length_729_cov_2.599424_g23550_i0forward_frame_3 - 1.1 9.2 6.8 1.5 8.8 4.1 2.5 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Helicase_C PF00271.31 NODE_29834_length_729_cov_2.599424_g23550_i0forward_frame_2 - 6.8e-13 48.9 0.0 9.8e-13 48.4 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DUF1534 PF07551.11 ORF99969 - 0.073 12.8 4.6 4.6 7.1 0.1 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1534) KH_1 PF00013.29 ORF98504 - 7e-08 32.2 0.0 1.7e-07 30.9 0.0 1.7 2 0 0 2 2 2 1 KH domain KH_5 PF13184.6 ORF98504 - 0.045 13.8 0.0 0.089 12.9 0.0 1.4 1 0 0 1 1 1 0 NusA-like KH domain Ribosom_S30AE_C PF16321.5 ORF98504 - 0.048 13.4 0.1 0.094 12.4 0.1 1.4 1 0 0 1 1 1 0 Sigma 54 modulation/S30EA ribosomal protein C terminus zf-CCHC_5 PF14787.6 ORF98283 - 0.099 12.4 0.1 1.6 8.5 0.0 2.5 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger WD40_like PF17005.5 ORF97745 - 0.00051 19.5 0.4 0.00087 18.7 0.3 1.4 2 0 0 2 2 2 1 WD40-like domain WD40 PF00400.32 ORF97745 - 0.017 16.0 8.8 1.2 10.2 0.0 4.4 5 0 0 5 5 5 0 WD domain, G-beta repeat THF_DHG_CYH_C PF02882.19 ORF97359 - 1.9e-61 206.1 0.1 2.3e-61 205.8 0.1 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 ORF97359 - 6.7e-21 74.7 1.2 1.3e-20 73.8 1.2 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OCD_Mu_crystall PF02423.15 ORF97359 - 0.042 12.8 0.0 0.058 12.3 0.0 1.2 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family BRK PF07533.16 ORF97359 - 0.068 12.8 0.0 0.13 11.9 0.0 1.5 1 0 0 1 1 1 0 BRK domain DUF5544 PF17698.1 ORF96767 - 0.18 11.9 3.9 0.41 10.8 3.9 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5544) ABC_tran PF00005.27 ORF95364 - 5e-34 117.7 0.0 7.9e-34 117.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter BCA_ABC_TP_C PF12399.8 ORF95364 - 1.1e-07 31.6 0.0 2.1e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_21 PF13304.6 ORF95364 - 0.00038 20.4 2.0 0.13 12.0 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 ORF95364 - 0.0097 15.0 0.0 0.014 14.5 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein SMC_N PF02463.19 ORF95364 - 0.011 15.1 0.1 3.5 7.0 0.0 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF95364 - 0.033 14.4 0.3 0.66 10.2 0.3 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.6 ORF95364 - 0.057 13.9 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain 2OG-FeII_Oxy_3 PF13640.6 ORF92284 - 0.039 14.9 0.0 0.073 14.0 0.0 1.5 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Hydrolase_4 PF12146.8 ORF92284 - 0.21 10.8 0.0 0.4 9.9 0.0 1.5 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Proteasome PF00227.26 ORF90487 - 1.8e-28 99.3 0.1 2.2e-28 99.0 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit PAP_assoc PF03828.19 ORF89550 - 2.7e-11 43.5 0.0 4.8e-11 42.7 0.0 1.4 1 0 0 1 1 1 1 Cid1 family poly A polymerase zf-C2H2_11 PF16622.5 ORF89550 - 0.00079 19.1 0.1 0.0013 18.4 0.1 1.4 1 0 0 1 1 1 1 zinc-finger C2H2-type zf-C2H2_2 PF12756.7 ORF89550 - 0.022 15.1 0.0 0.038 14.3 0.0 1.3 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-C2HC_2 PF13913.6 ORF89550 - 0.027 14.4 0.1 0.051 13.5 0.1 1.4 1 0 0 1 1 1 0 zinc-finger of a C2HC-type zf-C2H2_4 PF13894.6 ORF89550 - 0.13 13.2 0.2 0.3 12.0 0.2 1.6 1 0 0 1 1 1 0 C2H2-type zinc finger EFP PF01132.20 ORF89497 - 0.023 14.7 0.6 0.023 14.7 0.6 2.0 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain Sel_put PF04328.13 ORF89497 - 0.045 13.8 0.1 15 5.7 0.0 2.4 2 0 0 2 2 2 0 Selenoprotein, putative SLBP_RNA_bind PF15247.6 ORF89497 - 0.15 12.2 2.5 7.8 6.7 0.0 3.1 3 0 0 3 3 3 0 Histone RNA hairpin-binding protein RNA-binding domain PDZ PF00595.24 ORF86380 - 0.041 14.2 0.0 0.076 13.4 0.0 1.5 1 0 0 1 1 1 0 PDZ domain PDZ_6 PF17820.1 ORF86380 - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 PDZ domain OGFr_III PF04680.13 ORF86380 - 6 7.6 7.5 0.29 11.8 0.6 2.3 2 0 0 2 2 2 0 Opioid growth factor receptor repeat MAP17 PF15807.5 ORF8495 - 0.00097 19.4 0.1 0.0034 17.6 0.1 1.8 2 0 0 2 2 2 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 DUF2500 PF10694.9 ORF8495 - 0.0029 18.1 1.0 0.02 15.4 0.2 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF2500) EphA2_TM PF14575.6 ORF8495 - 0.0039 18.0 0.9 3.2 8.7 0.3 2.6 2 1 0 2 2 2 2 Ephrin type-A receptor 2 transmembrane domain SieB PF14163.6 ORF8495 - 0.0055 16.2 0.9 0.0074 15.8 0.1 1.6 2 0 0 2 2 2 1 Super-infection exclusion protein B FAM176 PF14851.6 ORF8495 - 0.0086 15.7 0.1 0.16 11.6 0.1 2.1 2 0 0 2 2 2 1 FAM176 family Conotoxin PF02950.17 ORF8495 - 0.012 16.6 0.2 4.1 8.5 0.0 2.5 2 0 0 2 2 2 0 Conotoxin Comm PF15957.5 ORF8495 - 0.013 15.9 0.0 0.029 14.7 0.0 1.7 1 0 0 1 1 1 0 Commissureless CLN3 PF02487.17 ORF8495 - 0.022 13.8 0.1 0.027 13.5 0.1 1.2 1 0 0 1 1 1 0 CLN3 protein MLANA PF14991.6 ORF8495 - 0.029 14.7 1.7 0.047 14.0 0.2 2.1 1 1 1 2 2 2 0 Protein melan-A DUF5316 PF17247.2 ORF8495 - 0.034 14.1 0.0 0.034 14.1 0.0 1.7 2 0 0 2 2 1 0 Family of unknown function (DUF5316) GRP PF07172.11 ORF8495 - 0.035 14.8 0.0 14 6.4 0.0 2.4 2 0 0 2 2 2 0 Glycine rich protein family CD20 PF04103.15 ORF8495 - 0.039 14.1 1.4 0.14 12.2 0.0 2.1 1 1 0 2 2 2 0 CD20-like family RBP_receptor PF14752.6 ORF8495 - 0.04 12.5 0.3 0.058 12.0 0.3 1.2 1 0 0 1 1 1 0 Retinol binding protein receptor SID-1_RNA_chan PF13965.6 ORF8495 - 0.044 12.2 0.4 0.06 11.8 0.4 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 7TM_GPCR_Srv PF10323.9 ORF8495 - 0.044 13.1 0.1 0.12 11.7 0.0 1.7 2 0 0 2 2 2 0 Serpentine type 7TM GPCR chemoreceptor Srv Pex24p PF06398.11 ORF8495 - 0.099 11.6 0.0 0.39 9.6 0.0 1.8 2 0 0 2 2 2 0 Integral peroxisomal membrane peroxin Ac76 PF05814.11 ORF8495 - 0.11 12.6 0.4 3.6 7.7 0.1 2.4 2 0 0 2 2 2 0 Orf76 (Ac76) FHIPEP PF00771.20 ORF8495 - 0.11 11.0 0.0 0.12 10.8 0.0 1.2 1 0 0 1 1 1 0 FHIPEP family Connexin PF00029.19 ORF8495 - 0.18 11.6 3.2 0.27 11.0 3.2 1.4 1 1 0 1 1 1 0 Connexin WBP-1 PF11669.8 ORF8495 - 1.1 9.9 6.0 11 6.7 3.1 2.9 2 1 1 3 3 2 0 WW domain-binding protein 1 DUF2681 PF10883.8 ORF8495 - 1.2 9.6 8.9 1.1 9.8 6.3 2.3 2 1 0 2 2 1 0 Protein of unknown function (DUF2681) Ferlin_C PF16165.5 ORF8495 - 2.9 7.8 7.4 0.077 12.9 0.9 1.7 2 0 0 2 2 2 0 Ferlin C-terminus SR-25 PF10500.9 ORF8495 - 5.7 6.5 18.3 13 5.3 18.3 1.5 1 1 0 1 1 1 0 Nuclear RNA-splicing-associated protein Helicase_C PF00271.31 ORF83619 - 0.021 15.2 0.6 0.021 15.2 0.6 1.8 2 0 0 2 2 2 0 Helicase conserved C-terminal domain YrzO PF14142.6 ORF83443 - 0.016 15.0 0.2 0.03 14.2 0.2 1.4 1 0 0 1 1 1 0 YrzO-like protein DUF484 PF04340.12 ORF79221 - 1.9e-89 299.2 0.4 2.2e-89 299.0 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF484 IU_nuc_hydro PF01156.19 ORF78644 - 1.2e-55 189.2 0.0 1.4e-55 189.1 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase 14-3-3 PF00244.20 ORF77227 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF77227 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF77227 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Kelch_4 PF13418.6 ORF73819 - 1.2e-07 31.6 0.3 0.038 14.0 0.0 3.2 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF73819 - 1.3e-07 31.1 3.0 9.8e-05 21.9 0.4 2.7 3 0 0 3 3 3 2 Kelch motif Kelch_6 PF13964.6 ORF73819 - 9.6e-07 28.9 0.8 8e-05 22.8 0.1 3.5 3 1 1 4 4 4 1 Kelch motif Kelch_3 PF13415.6 ORF73819 - 0.029 14.7 0.0 0.17 12.2 0.0 2.1 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF73819 - 0.19 11.8 0.3 1.9 8.6 0.0 2.6 3 0 0 3 3 3 0 Kelch motif Avian_gp85 PF03708.14 ORF73682 - 0.00086 18.6 1.5 0.0011 18.3 1.5 1.1 1 0 0 1 1 1 1 Avian retrovirus envelope protein, gp85 Glyco_hydro_25 PF01183.20 ORF7338 - 6.8e-26 91.5 5.5 8e-26 91.3 5.5 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Dev_Cell_Death PF10539.9 ORF7338 - 0.016 15.1 0.3 0.025 14.4 0.2 1.4 1 1 0 1 1 1 0 Development and cell death domain Ax_dynein_light PF10211.9 ORF73308 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF73308 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF73308 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF73308 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF73308 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF73308 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF73308 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF73308 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF73308 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF73308 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE zf-CCHC_5 PF14787.6 ORF72354 - 0.099 12.4 0.1 1.6 8.5 0.0 2.5 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger Glyco_hydro_25 PF01183.20 ORF71276 - 6.8e-26 91.5 5.5 8e-26 91.3 5.5 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Dev_Cell_Death PF10539.9 ORF71276 - 0.016 15.1 0.3 0.025 14.4 0.2 1.4 1 1 0 1 1 1 0 Development and cell death domain SieB PF14163.6 ORF70352 - 0.00062 19.3 1.0 0.00082 18.9 0.2 1.6 2 0 0 2 2 2 1 Super-infection exclusion protein B MAP17 PF15807.5 ORF70352 - 0.0045 17.2 0.0 0.015 15.5 0.1 1.8 2 0 0 2 2 2 1 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 EphA2_TM PF14575.6 ORF70352 - 0.0084 17.0 1.7 4.6 8.2 0.5 2.6 2 1 0 2 2 2 2 Ephrin type-A receptor 2 transmembrane domain DUF2500 PF10694.9 ORF70352 - 0.018 15.6 1.0 0.13 12.8 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2500) FAM176 PF14851.6 ORF70352 - 0.026 14.2 0.1 0.5 10.0 0.1 2.1 2 0 0 2 2 2 0 FAM176 family CD20 PF04103.15 ORF70352 - 0.029 14.5 1.6 0.085 12.9 0.0 2.1 1 1 0 2 2 2 0 CD20-like family Conotoxin PF02950.17 ORF70352 - 0.029 15.4 0.1 3.3 8.8 0.0 2.4 2 0 0 2 2 2 0 Conotoxin Comm PF15957.5 ORF70352 - 0.029 14.7 0.1 0.071 13.5 0.1 1.7 1 1 0 1 1 1 0 Commissureless TssO PF17561.2 ORF70352 - 0.04 14.0 0.7 0.077 13.1 0.7 1.4 1 0 0 1 1 1 0 Type VI secretion system, TssO CLN3 PF02487.17 ORF70352 - 0.047 12.7 0.0 0.058 12.4 0.0 1.2 1 0 0 1 1 1 0 CLN3 protein TAS2R PF05296.13 ORF70352 - 0.049 12.7 0.0 0.069 12.3 0.0 1.1 1 0 0 1 1 1 0 Taste receptor protein (TAS2R) LapA_dom PF06305.11 ORF70352 - 3.8 7.4 6.9 1.8 8.4 3.4 2.4 2 1 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Proteasome PF00227.26 ORF69466 - 6.5e-49 166.0 0.6 8.1e-49 165.7 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Pr_beta_C PF12465.8 ORF69466 - 1.8e-08 33.7 0.2 4.3e-08 32.4 0.0 1.8 2 0 0 2 2 2 1 Proteasome beta subunits C terminal DUF1878 PF08963.10 ORF65762 - 0.082 13.4 0.4 0.3 11.6 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1878) Proteasome PF00227.26 ORF63033 - 6.5e-49 166.0 0.6 8.1e-49 165.7 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Pr_beta_C PF12465.8 ORF63033 - 1.8e-08 33.7 0.2 4.3e-08 32.4 0.0 1.8 2 0 0 2 2 2 1 Proteasome beta subunits C terminal KduI PF04962.12 ORF62525 - 1.8e-41 142.2 0.3 2e-41 142.0 0.3 1.0 1 0 0 1 1 1 1 KduI/IolB family Cupin_2 PF07883.11 ORF62525 - 0.12 12.1 1.0 1.8 8.4 0.1 2.8 3 0 0 3 3 3 0 Cupin domain 14-3-3 PF00244.20 ORF59520 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF59520 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF59520 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Tissue_fac PF01108.17 ORF58837 - 0.23 11.3 0.4 0.43 10.5 0.4 1.5 1 0 0 1 1 1 0 Tissue factor DHHC PF01529.20 ORF57686 - 1.1e-34 119.4 14.0 1.9e-34 118.6 14.0 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase Ras PF00071.22 ORF54212 - 2.6e-54 183.2 2.1 3.7e-54 182.7 2.1 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF54212 - 5.8e-32 110.4 1.5 7.2e-32 110.1 0.1 1.8 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF54212 - 1.8e-10 40.6 0.4 2.6e-10 40.1 0.4 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF54212 - 5.3e-07 29.2 0.7 7.6e-07 28.7 0.7 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF54212 - 2.3e-05 24.5 0.3 5.2e-05 23.3 0.2 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 ORF54212 - 0.0017 18.3 1.4 0.038 13.9 0.1 2.8 1 1 2 3 3 3 1 RsgA GTPase AAA_7 PF12775.7 ORF54212 - 0.0067 16.0 0.0 0.013 15.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region ABC_tran PF00005.27 ORF54212 - 0.051 14.1 2.5 0.12 12.9 2.5 1.9 1 1 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 ORF54212 - 0.062 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain TrwB_AAD_bind PF10412.9 ORF54212 - 0.066 12.1 4.0 7.8 5.3 0.1 3.0 1 1 2 3 3 3 0 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 ORF54212 - 0.079 13.2 0.0 0.17 12.2 0.0 1.7 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 ORF54212 - 0.11 12.5 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_16 PF13191.6 ORF54212 - 0.12 12.8 0.0 0.15 12.5 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain Abhydrolase_4 PF08386.10 ORF52666 - 3.4e-15 56.0 0.0 1.8e-14 53.7 0.0 2.0 2 1 0 2 2 2 1 TAP-like protein CbiQ PF02361.16 ORF49093 - 0.0012 18.5 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Cobalt transport protein DUF4404 PF14357.6 ORF48740 - 0.021 15.5 3.9 0.028 15.1 1.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) GP24_25 PF17388.2 ORF48740 - 0.064 13.2 0.6 0.064 13.2 0.6 2.1 1 1 1 2 2 2 0 Tail assembly gene products 24 & 25 ThrE_2 PF12821.7 ORF48259 - 0.018 15.2 2.5 0.044 13.9 2.5 1.7 1 0 0 1 1 1 0 Threonine/Serine exporter, ThrE DUF998 PF06197.13 ORF48259 - 0.034 13.7 10.5 0.053 13.1 10.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF998) TctB PF07331.11 ORF48259 - 0.13 12.5 6.2 0.62 10.3 6.3 1.9 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Transposase_31 PF04754.12 ORF47909 - 3.9e-85 284.6 0.0 4.6e-85 284.4 0.0 1.0 1 0 0 1 1 1 1 Putative transposase, YhgA-like EphA2_TM PF14575.6 ORF47798 - 0.0018 19.1 0.4 0.081 13.8 0.1 2.4 2 0 0 2 2 2 2 Ephrin type-A receptor 2 transmembrane domain DUF4296 PF14129.6 ORF45476 - 2.9e-05 24.6 1.6 0.0044 17.6 0.0 2.6 3 0 0 3 3 3 2 Domain of unknown function (DUF4296) YpjP PF14005.6 ORF45476 - 2.4 8.2 8.3 1 9.4 0.8 2.7 1 1 2 3 3 3 0 YpjP-like protein DUF5600 PF18150.1 ORF45476 - 7.2 7.3 8.2 2.7 8.6 0.4 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF5600) Proteasome PF00227.26 ORF4306 - 6.5e-49 166.0 0.6 8.1e-49 165.7 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Pr_beta_C PF12465.8 ORF4306 - 1.8e-08 33.7 0.2 4.3e-08 32.4 0.0 1.8 2 0 0 2 2 2 1 Proteasome beta subunits C terminal LRR_4 PF12799.7 ORF42400 - 0.016 15.7 0.1 14 6.2 0.0 3.6 3 1 0 3 3 3 0 Leucine Rich repeats (2 copies) Ycf4 PF02392.16 ORF41488 - 7.5 6.1 6.6 0.45 10.1 0.2 2.1 2 1 1 3 3 3 0 Ycf4 EF-hand_6 PF13405.6 ORF41078 - 2.1e-15 55.3 0.1 6.5e-05 22.6 0.1 4.1 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF41078 - 9.4e-14 51.6 0.1 1.3e-06 28.8 0.0 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 ORF41078 - 3.5e-13 48.1 0.1 8.3e-05 21.9 0.0 4.1 5 0 0 5 5 5 3 EF hand EF-hand_5 PF13202.6 ORF41078 - 2.1e-07 30.1 0.0 0.00055 19.3 0.1 3.6 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 ORF41078 - 4e-06 26.6 0.0 0.32 10.9 0.0 3.5 2 1 1 3 3 3 3 EF-hand domain pair Dockerin_1 PF00404.18 ORF41078 - 0.00015 21.8 0.3 0.01 16.0 0.1 2.7 2 1 1 3 3 3 1 Dockerin type I domain NifZ PF04319.13 ORF41078 - 0.031 14.0 0.0 0.41 10.5 0.0 2.2 2 0 0 2 2 2 0 NifZ domain Adenine_glyco PF03352.13 ORF41078 - 0.037 13.8 0.1 0.28 10.9 0.2 2.3 2 1 0 2 2 2 0 Methyladenine glycosylase PIP49_C PF12260.8 ORF41078 - 0.042 13.5 0.0 6.7 6.3 0.0 2.4 2 0 0 2 2 2 0 Protein-kinase domain of FAM69 BetaGal_dom4_5 PF13364.6 ORF40219 - 0.13 12.9 0.0 0.53 10.9 0.0 1.8 2 1 0 2 2 2 0 Beta-galactosidase jelly roll domain TcdB_N PF12918.7 ORF37859 - 0.035 14.4 0.9 0.073 13.4 0.9 1.5 1 0 0 1 1 1 0 TcdB toxin N-terminal helical domain DUF4574 PF15141.6 ORF37859 - 0.17 11.8 0.5 0.38 10.7 0.5 1.6 1 0 0 1 1 1 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 DUF4227 PF14004.6 ORF37859 - 0.28 11.2 3.0 0.47 10.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4227) Ax_dynein_light PF10211.9 ORF37617 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF37617 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF37617 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF37617 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF37617 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF37617 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF37617 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF37617 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF37617 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF37617 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE 14-3-3 PF00244.20 ORF33441 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF33441 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF33441 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF2591 PF10765.9 ORF3308 - 0.043 14.1 0.1 0.079 13.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2591) DUF1659 PF07872.11 ORF32450 - 0.16 11.6 0.4 11 5.7 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1659) Cpn60_TCP1 PF00118.24 ORF31696 - 1e-61 209.1 0.1 1.1e-61 208.9 0.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Ribosomal_L11 PF00298.19 ORF31696 - 0.29 11.7 2.4 17 6.0 0.2 2.3 1 1 1 2 2 2 0 Ribosomal protein L11, RNA binding domain Ax_dynein_light PF10211.9 ORF29414 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF29414 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF29414 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF29414 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF29414 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF29414 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF29414 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF29414 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF29414 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF29414 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE Chromadorea_ALT PF05535.12 ORF27738 - 0.44 10.8 3.0 0.48 10.6 0.1 2.4 3 0 0 3 3 3 0 Chromadorea ALT protein Pkinase PF00069.25 ORF26532 - 2.4e-58 197.6 0.2 2.7e-58 197.4 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF26532 - 3.6e-31 108.4 0.1 4.2e-31 108.2 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF26532 - 5.7e-07 28.7 0.0 8.9e-07 28.0 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF26532 - 0.0014 18.0 0.0 0.0018 17.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 ORF26532 - 0.0024 17.0 0.0 0.0036 16.4 0.0 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 YukC PF10140.9 ORF26532 - 0.055 12.3 0.0 0.069 12.0 0.0 1.2 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Haspin_kinase PF12330.8 ORF26532 - 0.087 11.8 0.2 0.11 11.4 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Pepdidase_M14_N PF18027.1 ORF24791 - 1.1e-05 25.7 1.1 1.8e-05 25.1 0.1 1.8 2 0 0 2 2 2 1 Cytosolic carboxypeptidase N-terminal domain ThiS-like PF14453.6 ORF24791 - 0.14 12.2 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 ThiS-like ubiquitin Proteasome PF00227.26 ORF23793 - 6.5e-49 166.0 0.6 8.1e-49 165.7 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Pr_beta_C PF12465.8 ORF23793 - 1.8e-08 33.7 0.2 4.3e-08 32.4 0.0 1.8 2 0 0 2 2 2 1 Proteasome beta subunits C terminal Response_reg PF00072.24 ORF23413 - 2.6e-06 27.6 0.0 6e-06 26.4 0.0 1.6 2 0 0 2 2 2 1 Response regulator receiver domain DUF733 PF05306.11 ORF22107 - 0.066 13.5 2.3 1.1 9.6 2.0 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF733) Thioesterase PF00975.20 ORF21786 - 1.2e-51 176.1 0.0 1.4e-51 175.8 0.0 1.0 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_6 PF12697.7 ORF21786 - 0.00026 21.7 0.3 0.00033 21.3 0.3 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF21786 - 0.0056 16.3 0.0 0.0073 16.0 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Lipase_3 PF01764.25 ORF21786 - 0.0094 15.8 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_3 PF07859.13 ORF21786 - 0.023 14.6 0.0 0.027 14.3 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 ORF21786 - 0.024 13.9 0.0 0.033 13.5 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Glyco_hydro_25 PF01183.20 ORF15291 - 2.7e-27 96.1 4.8 3.1e-27 95.9 4.8 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Dev_Cell_Death PF10539.9 ORF15291 - 0.015 15.2 0.1 0.021 14.7 0.1 1.2 1 0 0 1 1 1 0 Development and cell death domain OspE PF02471.17 ORF15291 - 0.39 10.9 3.5 1.5 9.1 0.4 2.2 1 1 1 2 2 2 0 Borrelia outer surface protein E Ribosomal_S3Ae PF01015.18 ORF15249 - 4.9e-71 238.5 3.0 5.9e-71 238.2 3.0 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family Enterotoxin_HS1 PF08090.11 ORF15144 - 0.017 15.0 1.8 0.04 13.9 1.8 1.6 1 0 0 1 1 1 0 Heat stable E.coli enterotoxin 1 Peptidase_C12 PF01088.21 ORF149450 - 8.7e-38 130.2 0.0 9.9e-38 130.0 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 SET PF00856.28 ORF146837 - 0.015 15.7 0.0 0.027 14.9 0.0 1.4 1 0 0 1 1 1 0 SET domain Glyco_hydro_25 PF01183.20 ORF145132 - 6.8e-26 91.5 5.5 8e-26 91.3 5.5 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Dev_Cell_Death PF10539.9 ORF145132 - 0.016 15.1 0.3 0.025 14.4 0.2 1.4 1 1 0 1 1 1 0 Development and cell death domain Acetyltransf_7 PF13508.7 ORF144339 - 8e-05 23.0 0.0 0.00014 22.2 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 ORF144339 - 9.3e-05 22.7 0.0 0.00017 21.8 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF144339 - 0.00077 19.4 0.0 0.0013 18.6 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF144339 - 0.0024 17.9 0.0 0.0061 16.6 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Pkinase PF00069.25 ORF14412 - 3.2e-61 207.0 0.0 3.7e-61 206.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF14412 - 3.8e-34 118.1 0.0 7e-34 117.3 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF14412 - 6.8e-08 31.7 0.0 8.6e-08 31.4 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF14412 - 1.9e-06 27.4 0.0 3.5e-06 26.6 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF14412 - 3.8e-05 23.1 0.0 5e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF14412 - 0.032 14.2 0.0 0.048 13.6 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 ORF14412 - 0.033 13.8 0.1 0.047 13.3 0.1 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase EcKinase PF02958.20 ORF14412 - 0.035 13.4 0.0 0.18 11.1 0.0 1.9 2 0 0 2 2 2 0 Ecdysteroid kinase Hist_deacetyl PF00850.19 ORF141927 - 4.4e-43 147.9 0.0 5.6e-43 147.6 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Stm1_N PF09598.10 ORF140949 - 0.65 10.9 0.0 0.65 10.9 0.0 2.9 3 0 0 3 3 3 0 Stm1 Ax_dynein_light PF10211.9 ORF13879 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF13879 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF13879 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF13879 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF13879 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF13879 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF13879 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF13879 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF13879 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF13879 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE START PF01852.19 ORF138363 - 6.7e-07 28.9 0.0 9.6e-07 28.4 0.0 1.2 1 0 0 1 1 1 1 START domain Ank_2 PF12796.7 ORF136579 - 2.2e-36 124.3 16.3 4.4e-13 49.6 1.0 4.0 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF136579 - 4.2e-22 78.2 7.5 4.3e-05 24.0 0.1 5.0 5 1 1 6 6 6 5 Ankyrin repeats (many copies) Ank PF00023.30 ORF136579 - 1.5e-21 75.8 12.3 1.3e-05 25.4 0.2 5.6 6 0 0 6 6 6 5 Ankyrin repeat Ank_3 PF13606.6 ORF136579 - 5.7e-19 66.2 7.3 0.0036 17.7 0.2 5.7 6 0 0 6 6 6 5 Ankyrin repeat Ank_5 PF13857.6 ORF136579 - 1e-17 63.9 10.8 1.7e-06 28.2 0.4 5.5 3 1 3 6 6 6 5 Ankyrin repeats (many copies) Aminotran_3 PF00202.21 ORF136506 - 1e-70 238.4 0.2 1.3e-70 238.2 0.2 1.0 1 0 0 1 1 1 1 Aminotransferase class-III SH3_12 PF18129.1 ORF136506 - 0.11 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 Xrn1 SH3-like domain Pkinase PF00069.25 ORF131794 - 4e-54 183.7 0.1 7e-54 183.0 0.0 1.4 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF131794 - 2.9e-30 105.4 0.0 4.6e-30 104.8 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF131794 - 2.9e-10 39.9 0.0 4.4e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 ORF131794 - 1.8e-06 27.1 0.5 4.6e-06 25.8 0.1 1.7 2 0 0 2 2 2 1 Haspin like kinase domain Pkinase_fungal PF17667.1 ORF131794 - 3.3e-05 22.9 0.0 5.4e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 ORF131794 - 0.00013 21.4 0.0 0.00018 20.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Seadorna_VP7 PF07387.11 ORF131794 - 0.0045 16.1 0.0 0.0093 15.0 0.0 1.5 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 ORF131794 - 0.044 13.7 0.0 0.062 13.2 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family PIP49_C PF12260.8 ORF131794 - 0.11 12.2 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 YEATS PF03366.16 ORF128807 - 3.1e-21 75.1 0.6 7e-21 74.0 0.2 1.9 2 0 0 2 2 2 1 YEATS family zf-C3HC4_3 PF13920.6 ORF128807 - 5e-09 35.9 7.1 9e-09 35.1 7.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF128807 - 9.6e-09 35.0 9.4 2.2e-08 33.9 9.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF128807 - 6.5e-08 32.3 9.8 1.2e-07 31.4 9.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 ORF128807 - 1.7e-07 31.3 9.9 3.1e-07 30.4 9.9 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 ORF128807 - 1.8e-07 31.4 7.2 3.7e-07 30.4 7.2 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 ORF128807 - 3.4e-07 30.2 6.6 1e-06 28.6 6.6 1.9 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF128807 - 7.3e-05 22.7 8.9 0.00014 21.7 8.9 1.5 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 ORF128807 - 7.6e-05 22.5 6.2 0.00014 21.6 6.2 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 ORF128807 - 0.00025 21.1 2.0 0.00048 20.1 2.0 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_6 PF14835.6 ORF128807 - 0.0005 19.9 2.0 0.00096 19.0 2.0 1.4 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-rbx1 PF12678.7 ORF128807 - 0.0063 16.8 8.1 0.056 13.7 8.1 2.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain Mrx7 PF10906.8 ORF128807 - 0.024 14.9 0.1 0.076 13.3 0.1 1.9 1 0 0 1 1 1 0 MIOREX complex component 7 U-box PF04564.15 ORF128807 - 0.081 13.1 0.0 0.41 10.8 0.0 2.0 1 1 1 2 2 2 0 U-box domain zf-RING_4 PF14570.6 ORF128807 - 0.096 12.5 7.5 0.28 11.0 7.5 1.9 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-Nse PF11789.8 ORF128807 - 0.1 12.4 6.1 0.097 12.5 4.8 1.7 2 0 0 2 2 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3HC4_5 PF17121.5 ORF128807 - 0.25 11.3 5.9 0.57 10.1 5.9 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF128807 - 0.34 10.7 5.9 1.2 8.9 5.9 2.1 1 0 0 1 1 1 0 RING-like zinc finger zf-RING_10 PF16685.5 ORF128807 - 0.34 11.1 10.0 0.9 9.7 10.0 1.9 1 1 0 1 1 1 0 zinc RING finger of MSL2 Sigma70_r1_1 PF03979.14 ORF128288 - 0.047 13.7 0.2 0.12 12.4 0.2 1.8 1 1 0 1 1 1 0 Sigma-70 factor, region 1.1 14-3-3 PF00244.20 ORF12370 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF12370 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF12370 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Atg14 PF10186.9 ORF118538 - 7.5e-05 22.0 7.5 9.4e-05 21.6 7.5 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 HOOK PF05622.12 ORF118538 - 0.00016 20.0 9.2 0.00021 19.6 9.2 1.1 1 0 0 1 1 1 1 HOOK protein MAD PF05557.13 ORF118538 - 0.00022 19.7 7.8 0.00027 19.5 7.8 1.0 1 0 0 1 1 1 1 Mitotic checkpoint protein YkyA PF10368.9 ORF118538 - 0.00042 20.0 7.5 0.0017 18.1 8.3 1.5 2 0 0 2 2 1 1 Putative cell-wall binding lipoprotein Spc7 PF08317.11 ORF118538 - 0.00045 19.2 8.3 0.00063 18.7 8.3 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF812 PF05667.11 ORF118538 - 0.00079 18.4 5.1 0.00088 18.3 5.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Exonuc_VII_L PF02601.15 ORF118538 - 0.0014 18.3 3.4 0.0016 18.1 3.4 1.2 1 0 0 1 1 1 1 Exonuclease VII, large subunit AAA_13 PF13166.6 ORF118538 - 0.002 16.9 2.7 0.0024 16.6 2.7 1.2 1 0 0 1 1 1 1 AAA domain Laminin_II PF06009.12 ORF118538 - 0.0025 17.8 4.8 0.0044 17.0 4.8 1.4 1 0 0 1 1 1 1 Laminin Domain II Filament PF00038.21 ORF118538 - 0.0055 16.3 8.3 0.0081 15.8 8.3 1.3 1 0 0 1 1 1 1 Intermediate filament protein ATG16 PF08614.11 ORF118538 - 0.0056 16.9 10.4 0.0071 16.6 10.4 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) TMPIT PF07851.13 ORF118538 - 0.0067 15.7 4.9 0.01 15.1 4.9 1.2 1 0 0 1 1 1 1 TMPIT-like protein PIN_8 PF18476.1 ORF118538 - 0.0089 15.9 2.7 0.013 15.4 2.7 1.2 1 0 0 1 1 1 1 PIN like domain DUF3450 PF11932.8 ORF118538 - 0.011 15.1 9.6 0.017 14.5 9.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) MCPsignal PF00015.21 ORF118538 - 0.012 15.5 4.2 0.018 14.9 4.2 1.2 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF3584 PF12128.8 ORF118538 - 0.014 12.9 8.8 0.018 12.6 8.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF724 PF05266.14 ORF118538 - 0.025 14.4 6.1 0.035 13.9 6.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) HemX PF04375.14 ORF118538 - 0.028 13.7 6.8 0.034 13.4 6.8 1.2 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Fmp27_WPPW PF10359.9 ORF118538 - 0.029 13.2 4.1 0.034 13.0 4.1 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain FliJ PF02050.16 ORF118538 - 0.031 14.5 13.8 0.035 14.3 11.1 2.0 1 1 1 2 2 2 0 Flagellar FliJ protein DUF4200 PF13863.6 ORF118538 - 0.039 14.3 13.1 0.062 13.7 13.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) DUF3958 PF13125.6 ORF118538 - 0.045 13.9 3.3 0.045 13.9 3.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3958) DivIVA PF05103.13 ORF118538 - 0.05 13.7 8.2 0.084 13.0 8.2 1.3 1 0 0 1 1 1 0 DivIVA protein DUF1664 PF07889.12 ORF118538 - 0.05 13.6 6.5 0.09 12.8 6.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) DUF16 PF01519.16 ORF118538 - 0.059 13.9 8.7 0.11 13.0 8.2 1.7 1 1 1 2 2 2 0 Protein of unknown function DUF16 DUF745 PF05335.13 ORF118538 - 0.061 13.0 11.9 0.039 13.7 9.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF745) TPR_MLP1_2 PF07926.12 ORF118538 - 0.066 13.3 16.0 0.84 9.7 11.7 2.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein HAUS6_N PF14661.6 ORF118538 - 0.068 12.7 7.4 0.092 12.3 7.4 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Vps54_N PF10475.9 ORF118538 - 0.072 12.4 2.7 0.11 11.8 2.7 1.4 1 0 0 1 1 1 0 Vacuolar-sorting protein 54, of GARP complex IFT57 PF10498.9 ORF118538 - 0.1 11.5 7.0 0.18 10.7 7.0 1.4 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 FAM76 PF16046.5 ORF118538 - 0.11 11.8 5.8 0.14 11.5 5.8 1.1 1 0 0 1 1 1 0 FAM76 protein Lant_dehydr_C PF14028.6 ORF118538 - 0.13 11.7 2.8 0.2 11.2 2.8 1.2 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term FemAB PF02388.16 ORF118538 - 0.13 11.1 6.2 0.2 10.5 6.2 1.3 1 0 0 1 1 1 0 FemAB family DASH_Duo1 PF08651.10 ORF118538 - 0.14 11.9 2.9 14 5.5 2.5 2.5 1 1 1 2 2 2 0 DASH complex subunit Duo1 DUF4407 PF14362.6 ORF118538 - 0.19 11.1 5.7 0.21 10.9 5.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) NleF_casp_inhib PF16809.5 ORF118538 - 0.19 11.6 4.2 0.36 10.7 4.1 1.5 1 1 0 1 1 1 0 NleF caspase inhibitor OmpH PF03938.14 ORF118538 - 0.19 12.1 11.5 0.34 11.3 11.5 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) V_ATPase_I PF01496.19 ORF118538 - 0.2 9.5 4.4 0.24 9.3 4.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HrpB7 PF09486.10 ORF118538 - 0.31 11.4 11.4 1.4 9.3 11.3 2.1 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) Fib_alpha PF08702.10 ORF118538 - 0.32 11.2 5.7 0.56 10.4 5.7 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family ADIP PF11559.8 ORF118538 - 0.34 11.0 11.1 0.56 10.3 11.1 1.4 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding kleA_kleC PF17383.2 ORF118538 - 0.35 11.2 8.4 0.85 10.0 1.5 2.5 1 1 1 2 2 2 0 Uncharacterized KorC regulated protein A Mobilization_B PF17511.2 ORF118538 - 0.37 11.2 3.4 0.81 10.1 3.4 1.6 1 0 0 1 1 1 0 Mobilization protein B KxDL PF10241.9 ORF118538 - 0.59 10.4 9.1 9.9 6.5 8.8 2.4 1 1 0 1 1 1 0 Uncharacterized conserved protein 5_nucleotid PF05761.14 ORF118538 - 0.6 9.0 4.5 0.75 8.6 4.5 1.1 1 0 0 1 1 1 0 5' nucleotidase family Seryl_tRNA_N PF02403.22 ORF118538 - 0.66 10.2 9.5 1.3 9.3 9.5 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain GAS PF13851.6 ORF118538 - 0.79 9.0 13.4 2.1 7.6 13.4 1.7 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Fzo_mitofusin PF04799.13 ORF118538 - 0.85 9.2 6.4 2 8.0 6.4 1.6 1 1 0 1 1 1 0 fzo-like conserved region Exonuc_VII_S PF02609.16 ORF118538 - 1 9.5 8.3 0.57 10.3 5.3 2.0 1 1 1 2 2 2 0 Exonuclease VII small subunit CENP-H PF05837.12 ORF118538 - 1.2 9.5 10.1 2.3 8.7 10.1 1.4 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF948 PF06103.11 ORF118538 - 1.3 9.4 4.6 7.9 6.8 4.6 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) UPF0242 PF06785.11 ORF118538 - 1.3 9.1 9.0 2.1 8.4 9.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus PRKG1_interact PF15898.5 ORF118538 - 1.3 9.9 10.9 10 7.1 10.8 2.1 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain Med9 PF07544.13 ORF118538 - 1.4 9.0 9.6 13 6.0 0.6 2.6 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 PSII_Pbs27 PF13326.6 ORF118538 - 1.5 9.1 6.6 1.1 9.6 3.9 1.9 1 1 1 2 2 2 0 Photosystem II Pbs27 XhlA PF10779.9 ORF118538 - 1.5 9.0 5.7 12 6.2 4.5 2.3 2 0 0 2 2 2 0 Haemolysin XhlA Sec8_exocyst PF04048.14 ORF118538 - 1.5 8.7 7.1 6.6 6.6 4.7 2.2 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain Syntaxin-6_N PF09177.11 ORF118538 - 2.2 8.9 8.9 4.3 8.0 7.7 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal OEP PF02321.18 ORF118538 - 2.6 7.8 11.3 16 5.2 0.2 2.0 1 1 1 2 2 2 0 Outer membrane efflux protein Swi5 PF07061.11 ORF118538 - 2.8 8.1 11.9 2.6 8.2 2.3 2.4 1 1 1 2 2 2 0 Swi5 DUF2203 PF09969.9 ORF118538 - 2.9 8.6 8.2 12 6.6 7.2 2.1 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) COG2 PF06148.11 ORF118538 - 3.9 7.6 7.2 16 5.6 6.1 2.1 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 THOC7 PF05615.13 ORF118538 - 5.5 7.3 15.9 44 4.4 10.8 3.1 1 1 2 3 3 3 0 Tho complex subunit 7 FlaC_arch PF05377.11 ORF118538 - 6 7.3 5.7 59 4.2 0.1 2.7 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF2564 PF10819.8 ORF118538 - 7.9 6.9 12.3 0.28 11.6 2.1 2.8 2 1 2 4 4 3 0 Protein of unknown function (DUF2564) Bac_rhodopsin PF01036.18 ORF118165 - 0.034 13.7 1.0 0.034 13.7 1.0 2.0 2 0 0 2 2 2 0 Bacteriorhodopsin-like protein Raco_middle PF17651.1 ORF118165 - 0.12 12.0 0.7 0.23 11.2 0.2 1.6 2 0 0 2 2 2 0 RACo middle region Response_reg PF00072.24 ORF117654 - 8.9e-07 29.1 0.0 2e-06 27.9 0.0 1.6 2 0 0 2 2 2 1 Response regulator receiver domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks88.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks88.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks88.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks88.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:22 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Glyco_hydro_25 PF01183.20 ORF117402 - 5.5e-19 69.0 5.5 6.6e-19 68.8 5.5 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 25 Glyco_hydro_20 PF00728.22 ORF11404 - 1.8e-34 119.7 3.6 8e-34 117.6 3.6 1.8 1 1 0 1 1 1 1 Glycosyl hydrolase family 20, catalytic domain 14-3-3 PF00244.20 ORF112352 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF112352 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF112352 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat DHHC PF01529.20 ORF109897 - 1.1e-34 119.4 14.0 1.9e-34 118.6 14.0 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase Transgly PF00912.22 ORF109838 - 2.4e-52 177.0 0.0 3e-52 176.7 0.0 1.1 1 0 0 1 1 1 1 Transglycosylase NLE PF08154.12 ORF109506 - 5.3e-15 55.7 0.2 1.1e-14 54.7 0.2 1.6 1 0 0 1 1 1 1 NLE (NUC135) domain RAB3GAP2_N PF14655.6 ORF109506 - 0.00055 19.3 0.1 0.00076 18.8 0.1 1.3 1 0 0 1 1 1 1 Rab3 GTPase-activating protein regulatory subunit N-terminus RusA PF05866.11 ORF109506 - 0.039 14.5 0.4 0.095 13.2 0.4 1.6 1 0 0 1 1 1 0 Endodeoxyribonuclease RusA EAF PF09816.9 ORF109506 - 0.16 12.4 1.3 0.41 11.1 0.2 2.2 2 1 0 2 2 2 0 RNA polymerase II transcription elongation factor zf-C2H2_assoc PF16606.5 ORF107513 - 0.095 12.9 0.1 0.23 11.7 0.1 1.6 1 0 0 1 1 1 0 Unstructured conserved, between two C2H2-type zinc-fingers 14-3-3 PF00244.20 ORF107463 - 1.1e-70 237.7 8.8 1.2e-70 237.5 8.8 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_S8 PF00082.22 ORF107463 - 0.051 12.8 0.0 0.085 12.1 0.0 1.4 1 0 0 1 1 1 0 Subtilase family TPR_7 PF13176.6 ORF107463 - 0.13 12.4 0.9 18 5.7 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat Ax_dynein_light PF10211.9 ORF106935 - 2.3e-79 265.7 11.3 2.9e-79 265.4 11.3 1.1 1 0 0 1 1 1 1 Axonemal dynein light chain Syntaxin-6_N PF09177.11 ORF106935 - 0.0011 19.5 5.4 0.002 18.7 5.4 1.4 1 0 0 1 1 1 1 Syntaxin 6, N-terminal DUF724 PF05266.14 ORF106935 - 0.1 12.4 10.6 0.21 11.4 10.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 ORF106935 - 0.2 11.6 9.4 0.35 10.7 9.4 1.4 1 0 0 1 1 1 0 STAT protein, all-alpha domain DUF4988 PF16378.5 ORF106935 - 0.25 11.0 2.3 0.44 10.2 2.3 1.4 1 0 0 1 1 1 0 Domain of unknown function KIP1 PF07765.12 ORF106935 - 0.42 10.8 5.6 1.3 9.2 5.6 1.9 1 0 0 1 1 1 0 KIP1-like protein FapA PF03961.13 ORF106935 - 0.47 9.0 9.4 0.64 8.6 9.4 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4164 PF13747.6 ORF106935 - 0.56 10.5 15.5 6.4 7.1 4.4 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4164) DivIC PF04977.15 ORF106935 - 0.81 9.5 16.5 0.045 13.5 6.9 2.9 2 1 1 3 3 3 0 Septum formation initiator GrpE PF01025.19 ORF106935 - 1.4 8.6 13.1 2.8 7.6 13.1 1.5 1 0 0 1 1 1 0 GrpE CCM2_C PF16545.5 ORF106461 - 0.13 12.8 1.0 6.5 7.4 0.4 2.8 2 2 1 3 3 3 0 Cerebral cavernous malformation protein, harmonin-homology Alpha-amyl_C2 PF07821.12 ORF100713 - 4.1e-17 62.2 0.3 6.9e-17 61.4 0.3 1.4 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain Alpha-amylase PF00128.24 ORF100713 - 0.008 15.8 0.0 0.011 15.4 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, catalytic domain 2TM PF13239.6 ORF100035 - 7.7e-05 22.9 1.5 7.7e-05 22.9 1.5 2.3 2 0 0 2 2 2 1 2TM domain Abhydrolase_9_N PF15420.6 ORF100035 - 1.5 8.7 8.4 4.5 7.2 1.5 2.2 1 1 1 2 2 2 0 Alpha/beta-hydrolase family N-terminus Vpu PF00558.19 ORF100035 - 4 7.3 10.4 0.91 9.3 1.5 2.4 2 0 0 2 2 2 0 Vpu protein DctQ PF04290.12 ORF100035 - 4.7 7.1 14.7 0.15 11.9 5.5 2.3 1 1 1 2 2 2 0 Tripartite ATP-independent periplasmic transporters, DctQ component 5TM-5TMR_LYT PF07694.12 ORF100035 - 7.6 6.0 8.7 0.79 9.2 2.5 1.9 2 0 0 2 2 2 0 5TMR of 5TMR-LYT SieB PF14163.6 NODE_30182_length_721_cov_47.444606_g23847_i0forward_frame_1 - 0.031 13.8 2.5 0.054 13.0 2.5 1.4 1 0 0 1 1 1 0 Super-infection exclusion protein B CytochromB561_N PF09786.9 NODE_30178_length_721_cov_82.848397_g23843_i0forward_frame_1 - 0.2 10.6 4.0 0.22 10.5 4.0 1.0 1 0 0 1 1 1 0 Cytochrome B561, N terminal ArAE_2_N PF10337.9 NODE_30178_length_721_cov_82.848397_g23843_i0forward_frame_1 - 0.69 8.9 5.5 0.79 8.7 5.5 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal V_ATPase_I PF01496.19 NODE_30178_length_721_cov_82.848397_g23843_i0forward_frame_1 - 1.1 7.1 5.3 1.3 6.9 5.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FlaC_arch PF05377.11 NODE_30178_length_721_cov_82.848397_g23843_i0forward_frame_1 - 1.4 9.4 10.8 0.85 10.1 1.9 3.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Sugarporin_N PF11471.8 NODE_30178_length_721_cov_82.848397_g23843_i0forward_frame_1 - 2.5 8.1 13.8 0.2 11.6 8.6 1.9 2 0 0 2 2 2 0 Maltoporin periplasmic N-terminal extension AAA_23 PF13476.6 NODE_30178_length_721_cov_82.848397_g23843_i0forward_frame_1 - 5.2 7.5 8.8 6.8 7.1 8.8 1.2 1 0 0 1 1 1 0 AAA domain Nudc_N PF14050.6 NODE_30142_length_722_cov_2.349345_g23818_i0reverse_frame_1 - 0.084 12.9 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. ATG16 PF08614.11 NODE_30141_length_722_cov_3.088792_g23817_i0reverse_frame_1 - 0.017 15.3 0.2 0.024 14.9 0.2 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) PP2C PF00481.21 NODE_30140_length_722_cov_3.117904_g23816_i0reverse_frame_1 - 1.1e-24 87.5 0.0 1.3e-24 87.2 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 NODE_30140_length_722_cov_3.117904_g23816_i0reverse_frame_1 - 0.11 12.1 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein phosphatase 2C DUF4716 PF15837.5 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_1 - 0.049 13.7 0.2 0.049 13.7 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4716) DUF3089 PF11288.8 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_1 - 0.12 11.9 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) CAP_N PF01213.19 NODE_30109_length_722_cov_208.374090_g21993_i2reverse_frame_1 - 0.96 8.9 3.4 1.2 8.6 3.4 1.4 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Tubulin-binding PF00418.19 NODE_30091_length_723_cov_3.303779_g23774_i0forward_frame_1 - 0.3 11.1 1.8 1.1 9.4 0.1 2.5 2 1 1 3 3 3 0 Tau and MAP protein, tubulin-binding repeat Pkinase PF00069.25 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 4.1e-63 213.2 0.5 5e-63 212.9 0.5 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 5.1e-31 107.9 0.1 6.2e-31 107.6 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 6.4e-06 25.7 0.1 0.0055 16.1 0.0 2.1 2 0 0 2 2 2 2 Kinase-like Pkinase_fungal PF17667.1 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.00057 18.8 0.0 0.0013 17.6 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase Haspin_kinase PF12330.8 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.0028 16.6 0.2 0.0049 15.9 0.2 1.4 1 1 0 1 1 1 1 Haspin like kinase domain FTA2 PF13095.6 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.0059 16.2 0.7 0.55 9.8 0.0 2.1 1 1 1 2 2 2 2 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.036 14.0 0.0 0.13 12.1 0.0 1.7 1 1 1 2 2 2 0 Phosphotransferase enzyme family TBK1_ULD PF18396.1 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.046 13.6 0.0 0.57 10.1 0.0 2.1 2 0 0 2 2 2 0 TANK binding kinase 1 ubiquitin-like domain Kdo PF06293.14 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.055 12.8 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Lipocalin PF00061.23 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.082 13.1 1.7 0.46 10.7 0.4 2.1 1 1 1 2 2 2 0 Lipocalin / cytosolic fatty-acid binding protein family ABC1 PF03109.16 NODE_30088_length_723_cov_29.434593_g23771_i0forward_frame_1 - 0.13 12.4 0.1 0.29 11.3 0.1 1.5 1 1 0 1 1 1 0 ABC1 family DSBA PF01323.20 NODE_30072_length_723_cov_216.578488_g23758_i0forward_frame_1 - 5.3e-17 62.2 0.0 6.3e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 DSBA-like thioredoxin domain NAD-GH PF10712.9 NODE_30051_length_724_cov_2.750363_g23741_i0reverse_frame_3 - 1.5e-07 30.3 0.2 2.4e-07 29.6 0.2 1.3 1 0 0 1 1 1 1 NAD-specific glutamate dehydrogenase PriCT_1 PF08708.11 NODE_30051_length_724_cov_2.750363_g23741_i0reverse_frame_3 - 0.39 10.5 2.0 2.7 7.8 0.0 2.4 2 1 0 2 2 2 0 Primase C terminal 1 (PriCT-1) HSP70 PF00012.20 NODE_30051_length_724_cov_2.750363_g23741_i0forward_frame_3 - 2.7e-28 98.6 0.0 3.3e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein SET PF00856.28 NODE_30043_length_724_cov_70.169811_g23734_i0forward_frame_3 - 1.1e-08 35.7 0.0 3.2e-08 34.1 0.0 1.7 2 0 0 2 2 2 1 SET domain peroxidase PF00141.23 NODE_30043_length_724_cov_70.169811_g23734_i0forward_frame_3 - 0.038 13.7 0.0 0.053 13.2 0.0 1.2 1 0 0 1 1 1 0 Peroxidase Big_9 PF17963.1 NODE_30004_length_725_cov_2.517391_g23700_i0reverse_frame_2 - 0.27 12.0 15.8 0.39 11.5 2.9 3.0 3 0 0 3 3 3 0 Bacterial Ig domain TMEM72 PF16054.5 NODE_30004_length_725_cov_2.517391_g23700_i0forward_frame_2 - 2.5 7.7 8.0 0.14 11.9 1.3 2.2 3 0 0 3 3 3 0 Transmembrane protein family 72 DUSP PF06337.12 NODE_30001_length_725_cov_12.240580_g20693_i1forward_frame_2 - 3.7e-09 37.1 0.6 9.6e-09 35.8 0.1 1.9 2 0 0 2 2 2 1 DUSP domain Folliculin PF11704.8 NODE_30000_length_725_cov_27.556522_g23697_i0reverse_frame_2 - 0.4 10.5 6.7 0.75 9.6 6.7 1.5 1 1 0 1 1 1 0 Vesicle coat protein involved in Golgi to plasma membrane transport Homeobox_KN PF05920.11 NODE_29959_length_726_cov_3.251809_g23662_i0reverse_frame_3 - 4.7e-14 52.0 0.3 1.1e-13 50.8 0.3 1.6 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 NODE_29959_length_726_cov_3.251809_g23662_i0reverse_frame_3 - 5e-07 29.5 1.0 1.4e-06 28.1 0.1 2.0 2 0 0 2 2 2 1 Homeodomain DUF2935 PF11155.8 NODE_29944_length_726_cov_98.820550_g23647_i0reverse_frame_3 - 0.15 12.4 7.1 1.4 9.2 7.1 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) PSD4 PF07631.11 NODE_29944_length_726_cov_98.820550_g23647_i0reverse_frame_3 - 0.25 11.9 5.6 3.5 8.2 0.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF1592) DUF1053 PF06327.14 NODE_29944_length_726_cov_98.820550_g23647_i0reverse_frame_3 - 3.4 8.3 11.0 0.91 10.1 0.3 2.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) Cnd1_N PF12922.7 NODE_29944_length_726_cov_98.820550_g23647_i0forward_frame_2 - 0.043 13.7 0.4 0.088 12.7 0.4 1.5 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term FapA PF03961.13 ORF98662 - 0.1 11.2 4.9 0.11 11.0 4.9 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4252 PF14060.6 ORF98662 - 0.19 11.6 0.1 0.19 11.6 0.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4252) Filament PF00038.21 ORF97905 - 0.023 14.3 1.5 0.031 13.9 1.5 1.1 1 0 0 1 1 1 0 Intermediate filament protein TFIIA PF03153.13 ORF97905 - 2.7 7.9 7.4 3.3 7.6 7.4 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Ndc1_Nup PF09531.10 ORF97905 - 9.2 4.8 7.2 9.5 4.8 7.2 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup YEATS PF03366.16 ORF94614 - 1e-18 67.0 0.1 1.8e-18 66.3 0.1 1.4 1 0 0 1 1 1 1 YEATS family zf-RING_2 PF13639.6 ORF94614 - 2.8e-08 33.9 10.3 7.2e-08 32.6 9.1 2.3 3 0 0 3 3 3 1 Ring finger domain zf-C3HC4 PF00097.25 ORF94614 - 6e-08 32.4 11.0 1.2e-07 31.5 11.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF94614 - 2e-07 30.8 10.3 4.6e-07 29.6 10.3 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF94614 - 2.6e-07 30.4 8.9 4.5e-07 29.6 8.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF94614 - 6.9e-07 29.2 8.7 2.2e-06 27.6 7.4 2.4 2 1 1 3 3 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 ORF94614 - 1.4e-06 28.1 6.9 2.4e-06 27.3 6.9 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 ORF94614 - 2.4e-05 24.2 9.4 7.7e-05 22.6 9.5 1.8 1 1 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF94614 - 5.9e-05 23.1 11.5 0.00012 22.2 11.5 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-Nse PF11789.8 ORF94614 - 9.7e-05 22.1 8.8 0.0029 17.4 6.8 3.1 3 0 0 3 3 3 1 Zinc-finger of the MIZ type in Nse subunit zf-ANAPC11 PF12861.7 ORF94614 - 0.00076 19.5 2.6 0.0011 18.9 1.9 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 ORF94614 - 0.0035 17.6 9.1 0.018 15.3 9.1 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 ORF94614 - 0.01 15.9 4.4 0.026 14.7 4.4 1.7 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-RING_4 PF14570.6 ORF94614 - 0.046 13.5 5.7 0.1 12.4 5.7 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_6 PF14835.6 ORF94614 - 0.21 11.5 2.4 0.41 10.6 2.4 1.4 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Zn_ribbon_17 PF17120.5 ORF94614 - 0.25 11.0 3.7 0.49 10.1 3.7 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING-like PF08746.11 ORF94614 - 1.9 8.9 5.7 3.7 7.9 5.7 1.5 1 0 0 1 1 1 0 RING-like domain Hist_deacetyl PF00850.19 ORF94432 - 5.9e-54 183.6 0.2 7.6e-54 183.3 0.2 1.1 1 0 0 1 1 1 1 Histone deacetylase domain DUF3867 PF12983.7 ORF91932 - 0.00039 20.5 0.1 0.0011 19.0 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3867) DUF3221 PF11518.8 ORF91932 - 0.037 14.4 2.5 0.17 12.2 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3221) Terminase_6C PF17289.2 ORF8624 - 0.066 13.3 1.9 9.1 6.4 0.1 2.4 2 0 0 2 2 2 0 Terminase RNaseH-like domain UQ_con PF00179.26 ORF83663 - 1.1e-15 57.5 0.0 1.8e-15 56.8 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_E PF14462.6 ORF83663 - 0.11 12.3 0.0 0.24 11.2 0.0 1.6 1 1 0 1 1 1 0 Prokaryotic E2 family E Phage_NinH PF06322.11 ORF83628 - 0.19 11.6 0.7 0.36 10.7 0.2 1.7 2 0 0 2 2 2 0 Phage NinH protein Methyltransf_21 PF05050.12 ORF83532 - 0.0037 17.3 0.0 0.0053 16.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase FkbM domain p450 PF00067.22 ORF83447 - 1.1e-07 31.0 0.0 1.9e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Cytochrome P450 MEA1 PF06910.11 ORF81242 - 9.9e-09 35.9 25.4 4.6e-06 27.3 25.4 2.8 1 1 0 1 1 1 1 Male enhanced antigen 1 (MEA1) Herpes_BLRF2 PF05812.12 ORF80350 - 0.04 14.1 3.9 0.18 12.0 0.2 2.3 2 1 0 2 2 2 0 Herpesvirus BLRF2 protein TPH PF13868.6 ORF78762 - 0.027 13.0 85.1 0.8 8.1 85.1 2.6 1 1 0 1 1 1 0 Trichohyalin-plectin-homology domain MIP PF00230.20 ORF73657 - 8.1e-15 55.1 1.3 2.3e-14 53.6 1.3 1.7 1 1 0 1 1 1 1 Major intrinsic protein 7TM-7TMR_HD PF07698.11 ORF73657 - 0.017 14.9 1.2 0.017 14.9 1.2 2.3 1 1 1 2 2 2 0 7TM receptor with intracellular HD hydrolase Cwf_Cwc_15 PF04889.12 ORF70176 - 0.016 14.9 0.6 0.02 14.6 0.6 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein FapA PF03961.13 ORF69282 - 0.1 11.2 4.9 0.11 11.0 4.9 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4252 PF14060.6 ORF69282 - 0.19 11.6 0.1 0.19 11.6 0.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4252) HEAT_2 PF13646.6 ORF67975 - 9.7e-23 80.4 7.6 1e-07 32.2 0.0 3.2 1 1 2 3 3 3 3 HEAT repeats HEAT PF02985.22 ORF67975 - 4.5e-17 60.7 8.5 0.0024 18.0 0.3 6.2 6 0 0 6 6 6 4 HEAT repeat HEAT_EZ PF13513.6 ORF67975 - 1.7e-06 28.4 11.7 0.54 10.8 0.1 5.6 4 2 1 5 5 5 3 HEAT-like repeat HTH_IclR PF09339.10 ORF67975 - 9.6e-05 22.1 0.8 0.15 11.9 0.1 2.5 2 0 0 2 2 2 2 IclR helix-turn-helix domain TAF PF02969.17 ORF67975 - 0.0018 18.4 0.1 0.011 15.9 0.0 2.2 2 0 0 2 2 2 1 TATA box binding protein associated factor (TAF) Cnd1 PF12717.7 ORF67975 - 0.0079 16.3 0.0 0.37 10.8 0.0 2.6 1 1 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 V-ATPase_H_C PF11698.8 ORF67975 - 0.032 14.3 0.1 18 5.5 0.0 3.2 3 1 1 4 4 4 0 V-ATPase subunit H Cnd3 PF12719.7 ORF67975 - 0.041 13.1 0.0 0.81 8.8 0.0 2.5 1 1 0 1 1 1 0 Nuclear condensing complex subunits, C-term domain Adaptin_N PF01602.20 ORF67975 - 0.067 11.7 0.1 0.28 9.7 0.0 1.9 1 1 0 2 2 2 0 Adaptin N terminal region IFRD PF05004.13 ORF67975 - 0.07 12.2 2.9 11 5.0 1.0 3.0 2 1 0 2 2 2 0 Interferon-related developmental regulator (IFRD) HEAT_PBS PF03130.16 ORF67975 - 0.51 11.2 14.7 0.83 10.5 0.1 5.8 7 0 0 7 7 7 0 PBS lyase HEAT-like repeat ABC_tran PF00005.27 ORF6623 - 1.2e-28 100.3 0.1 2.1e-28 99.5 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF6623 - 3.7e-08 33.1 5.6 6e-06 25.8 5.6 2.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF6623 - 8.5e-05 22.5 0.3 0.21 11.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF87 PF01935.17 ORF6623 - 0.03 14.4 0.0 0.046 13.8 0.0 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain MMR_HSR1 PF01926.23 ORF6623 - 0.031 14.3 0.0 0.066 13.3 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_29 PF13555.6 ORF6623 - 0.069 12.9 0.1 0.16 11.7 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain Peptidase_M35 PF02102.15 ORF65302 - 0.089 11.6 0.4 0.13 11.1 0.4 1.2 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family adh_short_C2 PF13561.6 ORF56439 - 6.1e-51 173.2 0.0 1e-50 172.5 0.0 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 ORF56439 - 4.7e-47 160.0 0.0 5.5e-47 159.8 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 ORF56439 - 5.5e-09 36.2 0.0 7.3e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 ORF56439 - 0.002 17.7 0.1 0.004 16.7 0.1 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 ORF56439 - 0.023 15.3 0.0 0.049 14.2 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Polysacc_synt_2 PF02719.15 ORF56439 - 0.023 13.8 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Peptidase_M35 PF02102.15 ORF55775 - 0.11 11.3 0.5 0.18 10.7 0.5 1.3 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family PGA2 PF07543.12 ORF4949 - 0.12 12.4 1.8 2 8.4 0.2 2.1 1 1 1 2 2 2 0 Protein trafficking PGA2 HHH_2 PF12826.7 ORF48675 - 3.5e-24 84.7 4.1 9.4e-24 83.3 0.3 2.9 4 0 0 4 4 4 1 Helix-hairpin-helix motif BRCT PF00533.26 ORF48675 - 8.8e-15 54.8 0.0 1.5e-14 54.1 0.0 1.3 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain HHH_5 PF14520.6 ORF48675 - 8.4e-08 32.7 0.8 4.3e-06 27.2 0.1 2.8 3 1 0 3 3 3 1 Helix-hairpin-helix domain PTCB-BRCT PF12738.7 ORF48675 - 1.1e-06 28.5 0.0 1.9e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 twin BRCT domain HHH PF00633.23 ORF48675 - 2.1e-06 27.3 2.4 8.1e-06 25.4 0.0 3.0 4 0 0 4 4 4 1 Helix-hairpin-helix motif PUA_2 PF14306.6 ORF48675 - 0.027 14.2 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 PUA-like domain 5_3_exonuc PF01367.20 ORF48675 - 0.1 13.2 0.1 0.28 11.8 0.0 1.8 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold CRAL_TRIO PF00650.20 ORF47752 - 6e-20 71.6 1.1 1.2e-19 70.6 1.1 1.5 1 0 0 1 1 1 1 CRAL/TRIO domain Peptidase_C97 PF05903.14 ORF47752 - 0.036 13.9 0.0 0.063 13.1 0.0 1.5 1 1 0 1 1 1 0 PPPDE putative peptidase domain Thioredoxin_3 PF13192.6 ORF47752 - 0.047 13.7 0.4 3.6 7.7 0.0 2.4 2 0 0 2 2 2 0 Thioredoxin domain CRAL_TRIO_2 PF13716.6 ORF47752 - 0.068 13.3 0.4 0.16 12.2 0.2 1.7 2 0 0 2 2 2 0 Divergent CRAL/TRIO domain Topoisom_bac PF01131.20 ORF4758 - 2e-21 76.5 0.0 4.9e-16 58.7 0.0 2.0 2 0 0 2 2 2 2 DNA topoisomerase DRY_EERY PF09750.9 ORF45732 - 0.13 12.5 0.3 0.13 12.5 0.3 1.7 2 0 0 2 2 2 0 Alternative splicing regulator ANAPC3 PF12895.7 ORF44491 - 5.9e-09 36.0 0.2 5.4e-05 23.3 0.0 3.3 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 ORF44491 - 4.5e-06 27.0 3.4 3.4 8.7 0.2 4.8 3 1 2 5 5 5 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF44491 - 9.7e-06 26.1 2.1 0.074 13.7 0.1 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF44491 - 0.0001 22.1 0.3 0.044 13.9 0.0 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF44491 - 0.0016 18.2 0.8 0.11 12.3 0.0 3.8 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF44491 - 0.0033 17.5 0.2 6.5 7.2 0.0 3.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF44491 - 0.066 13.5 5.7 5.8 7.3 0.4 4.6 3 2 2 5 5 5 0 Tetratricopeptide repeat PABP PF00658.18 ORF44491 - 0.071 13.3 0.1 0.15 12.2 0.1 1.5 1 0 0 1 1 1 0 Poly-adenylate binding protein, unique domain TPR_4 PF07721.14 ORF44491 - 0.12 13.0 4.1 10 7.1 0.1 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat SPOC PF07744.13 ORF4357 - 0.021 14.8 0.1 0.04 13.8 0.1 1.3 1 1 0 1 1 1 0 SPOC domain T3SSipB PF16535.5 ORF4357 - 0.032 14.7 0.5 0.074 13.5 0.5 1.6 1 0 0 1 1 1 0 Type III cell invasion protein SipB Glu_dehyd_C PF16912.5 ORF4357 - 0.15 11.5 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus TTL PF03133.15 ORF42136 - 1.3e-28 100.0 0.1 1.9e-28 99.4 0.1 1.2 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF42136 - 0.00084 18.7 0.0 0.0014 17.9 0.0 1.4 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF42136 - 0.0057 15.9 0.0 0.0093 15.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 ORF42136 - 0.086 12.4 0.1 0.19 11.2 0.1 1.6 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus Sulphotransf PF09037.10 ORF3518 - 0.041 13.4 0.2 0.096 12.2 0.1 1.6 1 1 0 2 2 2 0 Stf0 sulphotransferase Ig_mannosidase PF17753.1 ORF3518 - 0.066 13.0 0.0 0.36 10.6 0.0 2.1 2 0 0 2 2 2 0 Ig-fold domain ERp29 PF07749.12 ORF3379 - 0.07 14.0 1.0 0.28 12.1 0.2 2.4 2 1 1 3 3 3 0 Endoplasmic reticulum protein ERp29, C-terminal domain DUF4632 PF15451.6 ORF3379 - 0.24 11.5 1.5 0.39 10.8 0.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4632) Methyltransf_9 PF08003.11 ORF29202 - 1.1e-147 491.0 0.1 1.3e-147 490.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_23 PF13489.6 ORF29202 - 9.1e-10 38.6 0.0 1.4e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF29202 - 6.2e-08 32.6 0.0 7.8e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF29202 - 9.5e-07 29.4 0.0 1.7e-06 28.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF29202 - 8.3e-06 26.4 0.0 1.6e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 ORF29202 - 5e-05 22.7 0.0 5.9e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_12 PF08242.12 ORF29202 - 9.8e-05 23.0 0.0 0.00015 22.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF29202 - 0.055 13.2 0.0 0.088 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MIP PF00230.20 ORF28546 - 7.4e-15 55.3 1.2 2.2e-14 53.7 1.2 1.7 1 1 0 1 1 1 1 Major intrinsic protein ENOD93 PF03386.14 ORF2595 - 0.043 13.7 3.2 2 8.3 0.1 3.5 3 1 1 4 4 4 0 Early nodulin 93 ENOD93 protein Stc1 PF12898.7 ORF2595 - 0.088 13.4 4.9 45 4.7 4.9 3.3 1 1 0 1 1 1 0 Stc1 domain Polysacc_synt_C PF14667.6 ORF2595 - 0.9 9.6 4.4 0.44 10.6 0.2 2.3 2 1 1 3 3 3 0 Polysaccharide biosynthesis C-terminal domain DUF2112 PF09885.9 ORF2595 - 1.1 9.3 6.5 9.8 6.2 0.2 3.5 2 2 1 4 4 4 0 Uncharacterized protein conserved in archaea (DUF2112) Peptidase_M35 PF02102.15 ORF23058 - 0.095 11.6 0.5 0.15 10.9 0.5 1.2 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family ATPgrasp_YheCD PF14398.6 ORF22204 - 0.13 11.5 0.1 0.13 11.5 0.1 2.1 1 1 1 2 2 2 0 YheC/D like ATP-grasp DUF596 PF04591.12 ORF20944 - 0.012 15.7 0.1 3.5 7.8 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function, DUF596 ACPS PF01648.20 ORF19028 - 5.6e-13 49.0 0.0 1.1e-12 48.0 0.0 1.6 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily Shisa PF13908.6 ORF1575 - 0.023 14.9 0.1 0.047 13.9 0.1 1.7 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator EVC2_like PF12297.8 ORF1575 - 0.075 11.7 0.1 0.11 11.1 0.1 1.2 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein MAP17 PF15807.5 ORF1575 - 0.11 12.7 0.5 0.2 11.9 0.5 1.4 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 FAM176 PF14851.6 ORF1575 - 0.71 9.5 3.7 2.5 7.8 3.7 1.9 1 1 0 1 1 1 0 FAM176 family NAD1 PF18778.1 ORF152857 - 4.3e-05 23.7 0.0 6.6e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Novel AID APOBEC clade 1 Toxin-deaminase PF14424.6 ORF152857 - 0.00012 22.2 0.1 0.00021 21.4 0.1 1.3 1 0 0 1 1 1 1 The BURPS668_1122 family of deaminases SNAD4 PF18750.1 ORF152857 - 0.00013 22.0 0.0 0.00021 21.4 0.0 1.3 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 dCMP_cyt_deam_1 PF00383.23 ORF152857 - 0.00015 21.6 0.0 0.00023 21.0 0.0 1.3 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region APOBEC2 PF18772.1 ORF152857 - 0.00053 20.1 0.0 0.00084 19.4 0.0 1.3 1 0 0 1 1 1 1 APOBEC2 NAD2 PF18782.1 ORF152857 - 0.0042 17.2 0.0 0.0065 16.6 0.0 1.3 1 0 0 1 1 1 1 Novel AID APOBEC clade 2 APOBEC3 PF18771.1 ORF152857 - 0.0062 16.7 0.0 0.012 15.8 0.0 1.4 1 0 0 1 1 1 1 APOBEC3 APOBEC4 PF18775.1 ORF152857 - 0.013 15.6 0.1 0.022 14.9 0.1 1.4 1 0 0 1 1 1 0 APOBEC4 APOBEC1 PF18769.1 ORF152857 - 0.079 13.2 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 APOBEC1 ENOD93 PF03386.14 ORF149793 - 0.043 13.7 3.2 2 8.3 0.1 3.5 3 1 1 4 4 4 0 Early nodulin 93 ENOD93 protein Stc1 PF12898.7 ORF149793 - 0.088 13.4 4.9 45 4.7 4.9 3.3 1 1 0 1 1 1 0 Stc1 domain Polysacc_synt_C PF14667.6 ORF149793 - 0.9 9.6 4.4 0.44 10.6 0.2 2.3 2 1 1 3 3 3 0 Polysaccharide biosynthesis C-terminal domain DUF2112 PF09885.9 ORF149793 - 1.1 9.3 6.5 9.8 6.2 0.2 3.5 2 2 1 4 4 4 0 Uncharacterized protein conserved in archaea (DUF2112) DMA PF03474.14 ORF145536 - 0.001 18.6 0.0 0.0019 17.8 0.0 1.4 1 0 0 1 1 1 1 DMRTA motif NADPH_Ox PF08414.10 ORF145536 - 0.005 17.2 1.1 0.011 16.1 1.1 1.6 1 0 0 1 1 1 1 Respiratory burst NADPH oxidase DUF4618 PF15397.6 ORF145536 - 0.0055 16.2 6.6 0.0055 16.2 6.6 2.1 2 1 1 3 3 3 1 Domain of unknown function (DUF4618) CUE PF02845.16 ORF145536 - 0.029 14.1 0.2 0.33 10.7 0.0 2.3 2 0 0 2 2 2 0 CUE domain TSC22 PF01166.18 ORF145536 - 0.11 12.8 2.9 4 7.8 2.3 2.7 1 1 1 2 2 2 0 TSC-22/dip/bun family APG6_N PF17675.1 ORF145536 - 0.89 10.1 17.0 0.042 14.4 6.5 2.4 2 1 1 3 3 3 0 Apg6 coiled-coil region YabA PF06156.13 ORF145536 - 1.1 9.9 10.2 0.3 11.8 4.0 2.6 1 1 2 3 3 3 0 Initiation control protein YabA Med9 PF07544.13 ORF145536 - 5.4 7.2 11.7 0.46 10.6 6.1 2.2 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Thia_YuaJ PF09515.10 ORF142683 - 0.07 13.1 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Thiamine transporter protein (Thia_YuaJ) YpM PF09144.10 ORF142683 - 0.095 12.9 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Yersinia pseudo-tuberculosis mitogen PA26 PF04636.13 ORF141621 - 0.032 13.2 0.3 0.039 12.9 0.3 1.2 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) DUF3290 PF11694.8 ORF141621 - 0.045 13.7 0.7 0.082 12.9 0.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) DUF4834 PF16118.5 ORF141621 - 0.047 14.6 1.3 0.16 13.0 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) DUF2254 PF10011.9 ORF141621 - 0.079 11.8 0.1 0.11 11.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) DUF4236 PF14020.6 ORF136792 - 0.34 11.5 3.3 8.1 7.1 0.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4236) DUF1116 PF06545.11 ORF13394 - 1.7e-51 174.8 0.9 2.4e-51 174.3 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1116) DHQ_synthase PF01761.20 ORF13315 - 0.18 10.9 0.1 0.81 8.8 0.0 1.9 2 0 0 2 2 2 0 3-dehydroquinate synthase Mem_trans PF03547.18 ORF129202 - 6.3e-15 54.5 0.3 7.7e-15 54.2 0.3 1.1 1 0 0 1 1 1 1 Membrane transport protein WD40 PF00400.32 ORF127510 - 4e-16 59.1 2.1 5.9e-05 23.8 0.0 4.6 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF127510 - 0.0001 22.5 0.0 0.0022 18.3 0.0 2.8 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain preSET_CXC PF18264.1 ORF126832 - 9.9 6.7 15.4 0.83 10.2 7.4 3.0 2 1 0 2 2 2 0 CXC domain Acetyltransf_1 PF00583.25 ORF121952 - 2.3e-13 50.4 0.0 4.8e-13 49.4 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF121952 - 2.2e-10 40.6 0.1 4e-10 39.7 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF121952 - 3.3e-08 33.9 0.0 5.5e-08 33.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 ORF121952 - 0.00024 21.2 0.3 0.0018 18.3 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 ORF121952 - 0.076 13.2 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Acetyltransf_13 PF13880.6 ORF121952 - 0.092 12.7 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Pho86 PF11124.8 ORF121952 - 0.093 12.2 1.3 0.15 11.5 0.0 1.9 1 1 1 2 2 2 0 Inorganic phosphate transporter Pho86 FR47 PF08445.10 ORF121952 - 0.11 12.5 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 FR47-like protein LCD1 PF09798.9 ORF121952 - 0.19 10.2 6.8 0.18 10.3 6.8 1.1 1 0 0 1 1 1 0 DNA damage checkpoint protein Smg8_Smg9 PF10220.9 ORF121952 - 1.5 7.0 11.0 1.9 6.7 11.0 1.1 1 0 0 1 1 1 0 Smg8_Smg9 MEA1 PF06910.11 ORF120611 - 9.9e-09 35.9 25.4 4.6e-06 27.3 25.4 2.8 1 1 0 1 1 1 1 Male enhanced antigen 1 (MEA1) zf-C2H2 PF00096.26 ORF117372 - 2.4e-12 46.6 25.5 7.6e-06 26.1 3.8 4.3 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF117372 - 1.1e-10 41.5 22.8 1.6e-05 25.1 0.8 4.6 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF117372 - 1.5e-09 37.8 25.4 0.00028 21.4 2.4 4.5 5 0 0 5 5 3 3 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 ORF117372 - 0.00057 20.1 11.3 0.08 13.3 1.7 3.0 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2HC_2 PF13913.6 ORF117372 - 0.0014 18.4 7.1 1.2 9.1 0.8 3.7 3 0 0 3 3 3 2 zinc-finger of a C2HC-type zf-C2H2_3rep PF18868.1 ORF117372 - 0.0094 16.6 0.3 0.0094 16.6 0.3 2.6 3 0 0 3 3 3 1 Zinc finger C2H2-type, 3 repeats zf-Di19 PF05605.12 ORF117372 - 0.021 15.1 10.7 0.97 9.8 1.6 3.4 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_11 PF16622.5 ORF117372 - 0.041 13.7 7.4 0.33 10.8 0.1 3.1 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-C2H2_2 PF12756.7 ORF117372 - 0.045 14.1 11.7 1.6 9.1 1.0 3.0 1 1 0 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_6 PF13912.6 ORF117372 - 0.048 13.7 4.6 0.048 13.7 4.6 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger PyrI_C PF02748.15 ORF117372 - 0.049 13.5 11.2 0.33 10.9 1.1 3.7 3 0 0 3 3 3 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-CHCC PF10276.9 ORF117372 - 0.12 12.4 0.2 0.12 12.4 0.2 3.6 3 0 0 3 3 3 0 Zinc-finger domain zf-met PF12874.7 ORF117372 - 0.86 10.1 11.2 4.9 7.7 1.4 3.2 2 1 1 3 3 3 0 Zinc-finger of C2H2 type zf-C2HE PF16278.5 ORF117372 - 4.1 7.9 10.0 1.9 9.0 4.9 2.8 2 1 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Rpr2 PF04032.16 ORF117372 - 7.5 6.9 13.9 0.63 10.4 2.2 3.6 2 2 1 3 3 3 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain PGA2 PF07543.12 ORF110358 - 0.12 12.4 1.8 2 8.4 0.2 2.1 1 1 1 2 2 2 0 Protein trafficking PGA2 ABC_tran PF00005.27 ORF110042 - 2.7e-28 99.2 0.1 4.5e-28 98.5 0.1 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF110042 - 3e-08 33.4 5.8 1.1e-06 28.3 1.0 2.8 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 ORF110042 - 0.0001 22.2 0.3 0.21 11.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 ORF110042 - 0.031 14.4 0.0 0.065 13.3 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase DUF87 PF01935.17 ORF110042 - 0.041 14.0 0.2 0.084 13.0 0.2 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_29 PF13555.6 ORF110042 - 0.068 12.9 0.1 0.16 11.7 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain GST_C_3 PF14497.6 ORF108092 - 7e-16 58.2 0.0 1.3e-15 57.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF108092 - 8.1e-08 32.4 0.0 2.1e-07 31.1 0.0 1.8 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF108092 - 4.8e-07 29.7 1.0 3.3e-06 27.0 0.1 2.5 3 0 0 3 3 3 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF108092 - 8.6e-05 22.8 0.0 0.00014 22.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF108092 - 0.0052 17.2 0.0 0.0087 16.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_6 PF17171.4 ORF108092 - 0.029 14.1 0.0 0.057 13.2 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain ADH_zinc_N PF00107.26 ORF106444 - 2.3e-21 76.1 0.0 3.6e-21 75.5 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 ORF106444 - 6e-15 56.5 0.0 1.4e-14 55.2 0.0 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase CSF-1 PF05337.11 ORF106305 - 0.14 12.2 0.1 0.22 11.6 0.1 1.2 1 0 0 1 1 1 0 Macrophage colony stimulating factor-1 (CSF-1) DUF2119 PF09892.9 ORF101291 - 0.023 14.1 0.0 0.032 13.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2119) TMP_2 PF06791.13 ORF101291 - 0.04 13.6 4.7 0.069 12.8 4.7 1.3 1 0 0 1 1 1 0 Prophage tail length tape measure protein Med3 PF11593.8 ORF101291 - 0.056 12.6 11.5 0.065 12.4 11.5 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal CtaG_Cox11 PF04442.14 ORF101291 - 0.11 12.5 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 TetR_N PF00440.23 ORF100659 - 0.00054 19.7 0.0 0.00094 18.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Lipase_GDSL_3 PF14606.6 ORF100659 - 0.097 12.8 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family Acetyltransf_7 PF13508.7 NODE_30246_length_719_cov_135.359649_g23897_i0forward_frame_1 - 0.0055 17.1 0.0 0.012 16.0 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Abhydro_lipase PF04083.16 NODE_30240_length_719_cov_245.714912_g23893_i0forward_frame_1 - 3e-17 62.0 0.0 5e-17 61.2 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Abhydrolase_1 PF00561.20 NODE_30240_length_719_cov_245.714912_g23893_i0forward_frame_1 - 0.00021 21.0 0.1 0.00027 20.7 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 NODE_30240_length_719_cov_245.714912_g23893_i0forward_frame_1 - 0.17 11.2 0.0 0.22 10.8 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 DUF4186 PF13811.6 NODE_30223_length_720_cov_2.956204_g23880_i0reverse_frame_1 - 0.016 15.2 0.5 0.047 13.7 0.5 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) DUF898 PF05987.13 NODE_30197_length_720_cov_391.592701_g23859_i0reverse_frame_1 - 0.014 14.5 10.7 0.018 14.1 10.7 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) ABC2_membrane_2 PF12679.7 NODE_30197_length_720_cov_391.592701_g23859_i0reverse_frame_1 - 0.039 13.2 11.7 0.053 12.8 11.7 1.3 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF2070 PF09843.9 NODE_30197_length_720_cov_391.592701_g23859_i0reverse_frame_1 - 3.8 5.7 15.3 4.6 5.4 15.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Nop14 PF04147.12 NODE_30197_length_720_cov_391.592701_g23859_i0forward_frame_1 - 4.3 5.4 13.2 5 5.2 13.2 1.0 1 0 0 1 1 1 0 Nop14-like family HMG_box PF00505.19 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 1.3e-20 73.6 5.9 1.3e-20 73.6 5.9 2.7 3 0 0 3 3 3 1 HMG (high mobility group) box HMG_box_2 PF09011.10 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 1.7e-10 41.4 4.5 1.7e-10 41.4 4.5 3.1 3 1 0 3 3 3 1 HMG-box domain CHDNT PF08073.12 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 9.1e-05 22.3 0.2 0.00022 21.1 0.2 1.6 1 0 0 1 1 1 1 CHDNT (NUC034) domain DUF3699 PF12480.8 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 0.041 14.0 0.0 0.08 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3699) AT_hook PF02178.19 NODE_30186_length_721_cov_4.084548_g23851_i0reverse_frame_2 - 0.09 12.7 0.5 0.09 12.7 0.5 4.8 3 0 0 3 3 3 0 AT hook motif DUF3159 PF11361.8 NODE_30186_length_721_cov_4.084548_g23851_i0forward_frame_2 - 0.018 14.8 0.3 0.026 14.3 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3159) Na_sulph_symp PF00939.19 NODE_30182_length_721_cov_47.444606_g23847_i0reverse_frame_2 - 0.34 9.9 0.0 0.44 9.5 0.0 1.1 1 0 0 1 1 1 0 Sodium:sulfate symporter transmembrane region Pox_F11 PF04943.12 NODE_30182_length_721_cov_47.444606_g23847_i0forward_frame_3 - 0.052 12.6 0.5 0.072 12.1 0.5 1.1 1 0 0 1 1 1 0 Poxvirus F11 protein Basic PF01586.16 NODE_30182_length_721_cov_47.444606_g23847_i0forward_frame_3 - 0.46 11.7 7.2 0.93 10.7 7.2 1.4 1 0 0 1 1 1 0 Myogenic Basic domain DUF720 PF05302.11 NODE_30181_length_721_cov_54.966472_g23846_i0reverse_frame_2 - 0.41 10.5 4.6 0.24 11.2 2.4 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF720) KH_1 PF00013.29 NODE_30154_length_721_cov_384.744898_g23825_i0reverse_frame_2 - 1.7e-20 72.6 2.3 1.1e-09 38.0 0.4 2.2 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 NODE_30154_length_721_cov_384.744898_g23825_i0reverse_frame_2 - 0.00019 21.2 0.1 0.19 11.6 0.1 2.3 2 0 0 2 2 2 2 KH domain RE_HaeII PF09554.10 NODE_30154_length_721_cov_384.744898_g23825_i0reverse_frame_2 - 0.057 12.7 0.0 0.077 12.2 0.0 1.1 1 0 0 1 1 1 0 HaeII restriction endonuclease KH_4 PF13083.6 NODE_30154_length_721_cov_384.744898_g23825_i0reverse_frame_2 - 0.06 13.2 0.3 1.2 9.1 0.0 2.2 2 0 0 2 2 2 0 KH domain Hpt PF01627.23 NODE_30142_length_722_cov_2.349345_g23818_i0forward_frame_2 - 3.4e-08 33.6 0.0 6.4e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 Hpt domain Ax_dynein_light PF10211.9 NODE_30142_length_722_cov_2.349345_g23818_i0forward_frame_2 - 1.2 9.0 7.6 0.2 11.6 4.0 1.5 2 0 0 2 2 2 0 Axonemal dynein light chain CIDR1_gamma PF18562.1 NODE_30141_length_722_cov_3.088792_g23817_i0reverse_frame_2 - 0.0034 17.4 0.5 0.011 15.8 0.5 1.9 1 0 0 1 1 1 1 Cysteine-Rich Interdomain Region 1 gamma TIL PF01826.17 NODE_30141_length_722_cov_3.088792_g23817_i0reverse_frame_2 - 9.1 6.6 13.8 2 8.7 9.6 2.1 2 0 0 2 2 2 0 Trypsin Inhibitor like cysteine rich domain TPR_1 PF00515.28 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 9.3e-28 94.9 0.1 3e-08 33.1 0.0 4.4 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 1.9e-25 86.9 3.5 5.4e-07 29.2 0.0 5.1 4 1 0 5 5 5 4 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 2.2e-20 72.0 6.5 1.6e-10 40.5 0.0 4.5 2 1 2 4 4 4 3 TPR repeat TPR_8 PF13181.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 5e-16 57.5 0.0 3e-05 23.9 0.0 4.9 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 3.4e-14 53.2 13.4 6.6e-09 36.3 0.0 3.4 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 2.6e-13 50.0 8.4 1.8e-05 24.9 0.1 3.7 2 2 1 3 3 3 3 Tetratricopeptide repeat TPR_9 PF13371.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 1e-11 44.8 7.4 3e-05 24.1 0.2 3.5 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 7.1e-11 41.7 0.3 0.0034 17.7 0.0 4.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 5.5e-10 39.2 3.1 0.00093 19.7 0.4 4.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 6.1e-10 39.5 9.8 8.2e-06 26.2 0.2 3.5 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 7.1e-10 38.9 15.9 0.23 12.4 0.0 5.2 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 1.4e-08 34.4 10.7 0.022 14.6 0.1 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 1.6e-08 34.0 3.0 0.61 10.2 0.0 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 3.2e-08 33.4 2.5 0.79 10.5 0.0 5.5 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_MalT PF17874.1 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 0.0006 19.3 0.2 0.63 9.3 0.0 2.2 2 0 0 2 2 2 2 MalT-like TPR region TPR_21 PF09976.9 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 0.0013 18.4 2.7 0.65 9.7 0.0 3.1 1 1 1 3 3 3 2 Tetratricopeptide repeat-like domain DUF3856 PF12968.7 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 0.0016 18.5 0.4 3.2 7.8 0.0 3.6 1 1 2 3 3 3 1 Domain of Unknown Function (DUF3856) NARP1 PF12569.8 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 0.0018 17.3 0.1 0.04 12.8 0.0 2.0 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 TPR_5 PF12688.7 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 0.0053 17.0 1.3 0.019 15.2 0.3 2.3 2 2 0 2 2 2 1 Tetratrico peptide repeat ANAPC5 PF12862.7 NODE_30123_length_722_cov_78.098981_g23800_i0forward_frame_2 - 0.075 13.1 0.1 0.24 11.5 0.0 1.8 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 5 HNOBA PF07701.14 NODE_30091_length_723_cov_3.303779_g23774_i0reverse_frame_2 - 0.086 12.3 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Heme NO binding associated Lipocalin_2 PF08212.12 NODE_30064_length_723_cov_396.815407_g23751_i0forward_frame_3 - 0.0043 17.0 0.0 0.0063 16.4 0.0 1.3 1 0 0 1 1 1 1 Lipocalin-like domain Hexapep PF00132.24 ORF9898 - 2.9e-09 36.3 8.9 0.00075 19.1 1.4 5.1 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF9898 - 0.0056 16.4 11.0 0.065 13.0 2.2 3.1 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF9898 - 0.017 14.1 1.6 0.1 11.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase ABM PF03992.16 ORF94772 - 1.3e-20 73.2 1.1 7.3e-13 48.4 0.1 2.2 2 0 0 2 2 2 2 Antibiotic biosynthesis monooxygenase PCI PF01399.27 ORF93507 - 5.6e-16 59.0 0.3 1.2e-15 58.0 0.3 1.6 1 0 0 1 1 1 1 PCI domain RPN6_C_helix PF18503.1 ORF93507 - 0.024 14.4 0.7 0.048 13.4 0.7 1.6 1 0 0 1 1 1 0 26S proteasome subunit RPN6 C-terminal helix domain Flavodoxin_5 PF12724.7 ORF93507 - 0.085 13.1 0.0 0.15 12.3 0.0 1.4 1 0 0 1 1 1 0 Flavodoxin domain Carb_anhydrase PF00194.21 ORF93158 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase 14-3-3 PF00244.20 ORF88997 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF88997 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat Ribosomal_L25p PF01386.19 ORF88787 - 4.7e-24 84.7 0.2 6.8e-24 84.2 0.2 1.2 1 0 0 1 1 1 1 Ribosomal L25p family LysR_substrate PF03466.20 ORF86137 - 6.8e-37 126.9 0.3 7.9e-37 126.7 0.3 1.0 1 0 0 1 1 1 1 LysR substrate binding domain Hexapep PF00132.24 ORF84509 - 2.9e-09 36.3 8.9 0.00075 19.1 1.4 5.1 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF84509 - 0.0056 16.4 11.0 0.065 13.0 2.2 3.1 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF84509 - 0.017 14.1 1.6 0.1 11.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase Peptidase_U32 PF01136.19 ORF8315 - 1.8e-11 43.6 0.0 2.3e-11 43.3 0.0 1.1 1 0 0 1 1 1 1 Peptidase family U32 Carb_anhydrase PF00194.21 ORF80370 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase RNA_pol_N PF01194.17 ORF79823 - 0.038 14.3 0.1 0.29 11.4 0.1 2.1 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit 14-3-3 PF00244.20 ORF76572 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF76572 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat DUF3450 PF11932.8 ORF75991 - 0.033 13.5 8.8 0.055 12.8 8.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) Caps_synth_GfcC PF06251.11 ORF75991 - 0.034 13.7 3.4 1.2 8.7 2.3 2.2 2 0 0 2 2 2 0 Capsule biosynthesis GfcC Thymidylat_synt PF00303.19 ORF75991 - 0.039 13.1 2.6 0.049 12.7 2.6 1.2 1 0 0 1 1 1 0 Thymidylate synthase TPR_MLP1_2 PF07926.12 ORF75991 - 0.043 13.9 19.6 0.041 14.0 12.5 3.2 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein PEP-utilisers_N PF05524.13 ORF75991 - 0.21 11.8 2.1 0.54 10.4 1.4 2.1 1 1 1 2 2 2 0 PEP-utilising enzyme, N-terminal APG6_N PF17675.1 ORF75991 - 0.69 10.4 27.5 0.6 10.6 10.6 3.1 1 1 2 3 3 3 0 Apg6 coiled-coil region DUF2203 PF09969.9 ORF75991 - 0.86 10.3 7.8 3.5 8.4 0.1 2.6 1 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) Atg14 PF10186.9 ORF75991 - 1.8 7.6 15.5 3.1 6.8 15.4 1.6 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 ATP-synt_E PF05680.12 ORF75991 - 6.3 7.2 7.1 20 5.6 7.1 2.0 1 0 0 1 1 1 0 ATP synthase E chain DUF4407 PF14362.6 ORF75991 - 7.7 5.8 8.5 11 5.3 8.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DivIC PF04977.15 ORF75991 - 8 6.3 15.3 24 4.8 3.5 3.1 1 1 2 3 3 3 0 Septum formation initiator DUF4709 PF15821.5 ORF75991 - 8.7 6.7 17.2 0.34 11.2 0.9 3.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4709) Kelch_1 PF01344.25 ORF74151 - 5.8e-16 57.8 1.4 1.3e-05 24.7 0.1 3.6 3 0 0 3 3 3 3 Kelch motif Kelch_4 PF13418.6 ORF74151 - 2.9e-11 43.2 0.2 0.00055 19.9 0.1 3.5 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 ORF74151 - 1.9e-09 37.5 5.5 0.00078 19.7 0.1 3.7 3 1 1 4 4 4 2 Kelch motif Kelch_5 PF13854.6 ORF74151 - 2.6e-06 27.3 2.8 0.026 14.5 0.3 3.6 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 ORF74151 - 7.2e-06 26.2 0.0 0.43 10.9 0.1 3.7 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF74151 - 0.0013 18.6 1.3 0.61 10.2 0.1 3.6 4 0 0 4 4 4 1 Kelch motif adh_short_C2 PF13561.6 ORF74027 - 0.0042 16.7 0.0 0.0055 16.3 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase UDPG_MGDP_dh_C PF03720.15 ORF74027 - 0.0093 16.4 0.2 0.019 15.4 0.2 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain adh_short PF00106.25 ORF74027 - 0.081 12.4 0.2 0.26 10.7 0.2 1.7 1 1 0 1 1 1 0 short chain dehydrogenase CCDC24 PF15669.5 ORF73660 - 0.023 14.6 0.6 0.045 13.6 0.6 1.5 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 24 family Hexapep PF00132.24 ORF71224 - 2.9e-09 36.3 8.9 0.00075 19.1 1.4 5.1 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF71224 - 0.0056 16.4 11.0 0.065 13.0 2.2 3.1 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF71224 - 0.017 14.1 1.6 0.1 11.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase Hexapep PF00132.24 ORF70784 - 2.9e-09 36.3 8.9 0.00075 19.1 1.4 5.1 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF70784 - 0.0056 16.4 11.0 0.065 13.0 2.2 3.1 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF70784 - 0.017 14.1 1.6 0.1 11.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase Hexapep PF00132.24 ORF68308 - 2.9e-09 36.3 8.9 0.00075 19.1 1.4 5.1 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF68308 - 0.0056 16.4 11.0 0.065 13.0 2.2 3.1 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF68308 - 0.017 14.1 1.6 0.1 11.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase Carb_anhydrase PF00194.21 ORF68150 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Carb_anhydrase PF00194.21 ORF66598 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase p450 PF00067.22 ORF66096 - 1.4e-28 99.9 0.1 1.6e-28 99.7 0.1 1.1 1 0 0 1 1 1 1 Cytochrome P450 Glyco_tran_WbsX PF14307.6 ORF66096 - 0.031 13.7 0.0 0.04 13.4 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase WbsX 14-3-3 PF00244.20 ORF62682 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF62682 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat Carb_anhydrase PF00194.21 ORF59992 - 3.5e-33 115.2 0.0 5.2e-33 114.6 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase DTW PF03942.15 ORF59634 - 2.5e-42 144.9 0.0 2.9e-42 144.6 0.0 1.1 1 0 0 1 1 1 1 DTW domain EF-hand_1 PF00036.32 ORF58991 - 7.9e-12 43.8 5.2 2.6e-05 23.5 0.4 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF58991 - 1.3e-09 38.4 2.8 2.9e-09 37.3 2.8 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF58991 - 1.4e-09 37.1 4.5 0.00023 20.8 0.4 2.6 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF58991 - 5.3e-06 25.7 1.6 0.038 13.5 0.3 2.6 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF58991 - 4.3e-05 23.3 6.7 0.052 13.4 0.3 2.6 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_4 PF12763.7 ORF58991 - 0.072 13.0 0.7 11 6.0 0.2 2.4 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Alpha-amyl_C2 PF07821.12 ORF58376 - 4e-17 62.2 0.3 6.8e-17 61.4 0.3 1.4 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain Alpha-amylase PF00128.24 ORF58376 - 0.0078 15.8 0.0 0.011 15.4 0.0 1.1 1 0 0 1 1 1 1 Alpha amylase, catalytic domain Cyt-b5 PF00173.28 ORF57781 - 2.2e-07 30.9 0.0 5e-07 29.8 0.0 1.7 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Lectin_C PF00059.21 ORF53834 - 7e-14 52.5 1.4 5.4e-13 49.6 1.4 2.1 2 0 0 2 2 2 1 Lectin C-type domain UL45 PF05473.12 ORF53834 - 0.0098 15.5 0.1 0.018 14.7 0.1 1.3 1 0 0 1 1 1 1 UL45 protein, carbohydrate-binding C-type lectin-like Abhydrolase_2 PF02230.16 ORF51819 - 1.4e-56 191.8 0.0 1.6e-56 191.6 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF51819 - 4.1e-11 42.8 0.0 5.5e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 ORF51819 - 3.7e-06 26.6 0.8 0.016 14.7 0.0 2.9 2 1 1 3 3 3 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF51819 - 0.0047 16.2 0.2 0.2 10.9 0.0 2.7 2 1 1 3 3 3 1 Serine aminopeptidase, S33 FSH1 PF03959.13 ORF51819 - 0.021 14.5 0.1 0.051 13.2 0.1 1.7 1 1 0 1 1 1 0 Serine hydrolase (FSH1) BAAT_C PF08840.11 ORF51819 - 0.15 12.0 0.4 9 6.2 0.1 2.1 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal 14-3-3 PF00244.20 ORF51534 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF51534 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat DUF1454 PF07305.12 ORF51491 - 2.6e-85 284.7 1.5 3.3e-85 284.3 1.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1454) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks89.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks89.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks89.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks89.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:48 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ion_trans PF00520.31 ORF131641 - 1.4e-06 27.8 25.1 1.4e-06 27.8 25.1 3.4 2 2 0 2 2 2 1 Ion transport protein DEAD PF00270.29 ORF23921 - 2.2e-45 154.5 0.0 2.9e-44 150.9 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF23921 - 2.8e-25 88.8 0.1 1.8e-23 83.0 0.0 2.6 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 ORF23921 - 0.00077 19.5 0.0 0.081 12.9 0.0 2.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 ORF23921 - 0.00094 18.5 0.1 0.0016 17.7 0.1 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase SecA_DEAD PF07517.14 ORF23921 - 0.053 12.8 0.0 0.14 11.4 0.0 1.7 1 0 0 1 1 1 0 SecA DEAD-like domain Nudc_N PF14050.6 ORF23921 - 0.09 12.8 0.1 0.28 11.2 0.0 1.9 2 0 0 2 2 2 0 N-terminal conserved domain of Nudc. RSRP PF17069.5 ORF23921 - 0.28 10.7 25.8 2.3 7.7 24.5 2.1 2 0 0 2 2 2 0 Arginine/Serine-Rich protein 1 DUF1509 PF07420.11 ORF23921 - 0.72 8.7 9.4 1.4 7.8 9.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1509) Corona_nucleoca PF00937.18 ORF23921 - 2.1 7.3 11.2 3.9 6.4 11.2 1.3 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein zf-RING_2 PF13639.6 ORF143989 - 2.4e-08 34.2 10.2 2.4e-08 34.2 10.2 3.1 3 0 0 3 3 3 1 Ring finger domain FAM163 PF15069.6 ORF143989 - 0.00031 21.2 4.0 0.00031 21.2 4.0 2.3 2 0 0 2 2 2 1 FAM163 family zf-rbx1 PF12678.7 ORF143989 - 0.0015 18.8 7.1 0.0015 18.8 7.1 3.0 4 0 0 4 4 4 1 RING-H2 zinc finger domain FANCL_C PF11793.8 ORF143989 - 0.081 13.1 8.7 0.82 9.9 8.7 2.7 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3HC4_2 PF13923.6 ORF143989 - 0.14 12.1 9.2 0.38 10.6 9.2 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF143989 - 0.27 11.0 10.4 0.15 11.8 3.5 3.1 3 0 0 3 3 3 0 RING-like zinc finger zf-ANAPC11 PF12861.7 ORF143989 - 1.7 8.7 10.7 0.037 14.1 2.3 2.7 4 0 0 4 4 4 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 ORF143989 - 4.7 6.9 16.2 0.041 13.5 7.7 2.0 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type CDT1 PF08839.11 ORF39899 - 5.1e-15 56.2 5.6 5.1e-15 56.2 5.6 3.6 2 1 0 2 2 2 1 DNA replication factor CDT1 like CDT1_C PF16679.5 ORF39899 - 0.41 11.1 5.0 0.4 11.1 1.3 2.8 2 0 0 2 2 2 0 DNA replication factor Cdt1 C-terminal domain CENP-H PF05837.12 ORF22995 - 0.011 16.1 1.6 0.011 16.1 1.6 2.9 3 0 0 3 3 3 0 Centromere protein H (CENP-H) CEP209_CC5 PF16574.5 ORF22995 - 0.13 12.5 13.2 1.4 9.1 2.9 3.3 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 ADIP PF11559.8 ORF22995 - 0.41 10.7 16.1 0.76 9.8 5.9 2.8 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 ORF22995 - 1.7 7.9 15.7 0.39 10.0 4.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Ntox28 PF15605.6 ORF22995 - 8.8 6.6 8.0 1.8 8.8 0.9 3.5 5 0 0 5 5 5 0 Bacterial toxin 28 Glyco_hydro_3 PF00933.21 ORF14740 - 9.4e-74 248.6 0.0 1.4e-73 248.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 N terminal domain Glyco_hydro_3_C PF01915.22 ORF14740 - 8e-51 172.9 0.0 1.1e-50 172.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 ORF14740 - 4.6e-20 71.5 0.0 9.6e-20 70.5 0.0 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain CENP-H PF05837.12 ORF127898 - 0.011 16.1 1.6 0.011 16.1 1.6 2.9 3 0 0 3 3 3 0 Centromere protein H (CENP-H) CEP209_CC5 PF16574.5 ORF127898 - 0.13 12.4 13.2 1.4 9.1 2.9 3.3 2 1 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 ADIP PF11559.8 ORF127898 - 0.41 10.7 16.1 0.76 9.8 5.9 2.8 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF3450 PF11932.8 ORF127898 - 1.7 7.9 15.7 0.39 10.0 4.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Ntox28 PF15605.6 ORF127898 - 8.8 6.6 8.0 1.8 8.8 0.9 3.5 5 0 0 5 5 5 0 Bacterial toxin 28 tRNA-synt_1 PF00133.22 ORF93408 - 1.6e-113 380.1 0.0 2.4e-113 379.5 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF93408 - 2e-34 118.7 0.2 3.5e-34 118.0 0.2 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA Val_tRNA-synt_C PF10458.9 ORF93408 - 4.6e-07 30.0 4.7 1.1e-06 28.8 4.7 1.7 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1_2 PF13603.6 ORF93408 - 3.4e-06 26.7 0.0 9.5e-06 25.2 0.0 1.7 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1g PF09334.11 ORF93408 - 1.3e-05 24.2 0.1 0.1 11.3 0.1 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF93408 - 0.003 17.0 0.4 0.01 15.2 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1b PF00579.25 ORF93408 - 0.046 13.0 0.1 0.1 11.9 0.1 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) FAM76 PF16046.5 ORF93408 - 0.057 12.8 0.6 0.085 12.2 0.6 1.2 1 0 0 1 1 1 0 FAM76 protein EnY2 PF10163.9 ORF93408 - 0.093 13.1 2.2 0.41 11.1 0.7 2.7 3 0 0 3 3 3 0 Transcription factor e(y)2 Anoctamin PF04547.12 ORF138769 - 1.9e-87 294.0 17.6 2.4e-87 293.6 17.6 1.1 1 0 0 1 1 1 1 Calcium-activated chloride channel Baculo_PEP_C PF04513.12 ORF116578 - 0.76 9.8 17.7 1.3 9.0 1.8 3.8 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Apolipoprotein PF01442.18 ORF116578 - 1.1 9.1 44.6 0.61 9.9 24.2 3.2 2 2 0 2 2 2 0 Apolipoprotein A1/A4/E domain DUF445 PF04286.12 ORF116578 - 5.2 6.8 15.4 8.9 6.0 15.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF445) NPV_P10 PF05531.12 ORF116578 - 6.4 7.3 23.6 28 5.2 2.7 5.9 3 1 2 5 5 5 0 Nucleopolyhedrovirus P10 protein TPP_enzyme_N PF02776.18 ORF105731 - 4.5e-59 198.9 0.7 5.7e-56 188.8 0.2 2.5 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 ORF105731 - 5.7e-51 172.3 0.2 5.1e-49 166.0 0.0 3.1 3 1 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 ORF105731 - 6e-48 162.1 0.2 1.2e-47 161.1 0.2 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 ORF105731 - 0.0076 16.0 0.1 0.016 14.9 0.0 1.6 2 0 0 2 2 2 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ROQ_II PF18386.1 ORF105731 - 0.16 11.8 0.3 0.38 10.6 0.3 1.6 1 0 0 1 1 1 0 Roquin II domain HATPase_c PF02518.26 ORF102764 - 1.3e-15 57.9 0.7 1.3e-15 57.9 0.7 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF102764 - 0.00058 19.9 0.1 0.0014 18.6 0.1 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 ORF102764 - 0.0084 15.9 0.1 0.022 14.6 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cytokin_check_N PF10407.9 ORF86777 - 7.3e-09 35.5 0.0 3e-08 33.5 0.0 2.1 1 0 0 1 1 1 1 Cdc14 phosphatase binding protein N-terminus ubiquitin PF00240.23 ORF86777 - 0.022 14.5 0.1 8.9 6.1 0.0 2.6 2 0 0 2 2 2 0 Ubiquitin family peroxidase PF00141.23 ORF42968 - 2e-85 286.1 0.0 1.6e-47 162.2 0.0 2.4 2 0 0 2 2 2 2 Peroxidase ABC_membrane PF00664.23 ORF35976 - 4.7e-22 78.9 21.2 7.1e-22 78.3 21.2 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 ORF35976 - 9.9e-20 71.4 0.0 2.7e-19 70.1 0.0 1.8 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF35976 - 9.2e-06 25.7 0.0 0.13 12.0 0.0 2.6 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF35976 - 3.3e-05 23.4 1.1 0.0055 16.2 1.1 2.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Dynamin_N PF00350.23 ORF35976 - 0.0002 21.5 1.8 0.00025 21.2 0.3 2.1 2 1 0 2 2 1 1 Dynamin family AAA_29 PF13555.6 ORF35976 - 0.0033 17.1 0.1 0.0083 15.8 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 ORF35976 - 0.0065 16.7 0.1 0.039 14.2 0.0 2.3 3 1 1 4 4 4 1 AAA domain NB-ARC PF00931.22 ORF35976 - 0.013 14.7 0.0 0.024 13.8 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain RNA_helicase PF00910.22 ORF35976 - 0.013 15.9 0.1 0.68 10.4 0.0 2.6 2 0 0 2 2 2 0 RNA helicase NACHT PF05729.12 ORF35976 - 0.018 15.0 0.1 0.04 13.8 0.1 1.6 1 0 0 1 1 1 0 NACHT domain T2SSE PF00437.20 ORF35976 - 0.021 13.9 0.0 0.038 13.1 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1 PF01926.23 ORF35976 - 0.034 14.2 0.1 0.096 12.8 0.1 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase TsaE PF02367.17 ORF35976 - 0.036 14.1 0.0 0.1 12.6 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_23 PF13476.6 ORF35976 - 0.051 14.1 6.8 0.31 11.5 6.8 2.3 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 ORF35976 - 0.072 13.0 0.4 0.92 9.4 0.1 2.4 2 0 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 ORF35976 - 0.086 12.7 1.6 0.096 12.6 0.3 1.7 2 0 0 2 2 2 0 RsgA GTPase Zeta_toxin PF06414.12 ORF35976 - 0.12 11.6 0.0 0.29 10.4 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_27 PF13514.6 ORF35976 - 0.13 11.8 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 ORF35976 - 0.17 11.9 2.3 0.17 12.0 0.3 2.0 2 0 0 2 2 2 0 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 ORF35976 - 0.19 11.1 0.0 0.37 10.1 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family zf-C3HC4_3 PF13920.6 ORF33112 - 9.6e-07 28.6 17.1 2.1e-05 24.3 9.5 2.4 2 0 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF33112 - 1.8e-05 24.5 11.4 1.8e-05 24.5 11.4 2.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF33112 - 8.1e-05 22.9 11.6 8.1e-05 22.9 11.6 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF33112 - 8.1e-05 22.4 10.2 8.1e-05 22.4 10.2 1.9 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF33112 - 0.00055 20.2 7.6 0.0019 18.5 7.6 2.0 1 0 0 1 1 1 1 RING-H2 zinc finger domain DUF1664 PF07889.12 ORF33112 - 0.00076 19.5 1.2 0.00076 19.5 1.2 6.6 5 2 3 8 8 8 1 Protein of unknown function (DUF1664) zf-RING_UBOX PF13445.6 ORF33112 - 0.0026 17.7 10.6 0.0071 16.3 10.6 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF33112 - 0.0053 16.7 13.2 0.0053 16.7 13.2 3.0 2 1 1 3 3 3 1 zinc-RING finger domain HypA PF01155.19 ORF33112 - 0.098 12.7 11.6 3 7.9 0.1 3.4 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 ORF33112 - 0.19 11.8 15.0 8.2 6.5 0.1 3.1 2 1 1 3 3 3 0 Double zinc ribbon zf-ANAPC11 PF12861.7 ORF33112 - 0.61 10.2 5.9 0.22 11.6 2.8 1.9 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 ORF33112 - 0.72 9.8 18.6 0.043 13.7 11.2 2.6 2 1 1 3 3 3 0 Prokaryotic RING finger family 4 zinc-ribbons_6 PF07191.12 ORF33112 - 0.79 9.7 14.0 0.75 9.8 8.0 3.0 2 0 0 2 2 2 0 zinc-ribbons zinc_ribbon_4 PF13717.6 ORF33112 - 0.88 9.5 6.6 3.2 7.8 0.1 3.2 3 0 0 3 3 3 0 zinc-ribbon domain zf-RING_4 PF14570.6 ORF33112 - 2.7 7.9 17.6 0.47 10.3 10.9 2.9 2 1 1 3 3 3 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 ORF33112 - 2.8 8.2 14.4 0.16 12.2 7.7 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING Abhydrolase_2 PF02230.16 ORF87508 - 3.5e-05 23.7 0.0 8.6e-05 22.4 0.0 1.6 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF87508 - 0.00043 19.9 0.0 0.0016 18.0 0.0 1.9 2 0 0 2 2 2 1 Dienelactone hydrolase family WRNPLPNID PF15017.6 ORF87508 - 2.4 9.1 4.2 5 8.1 4.2 1.5 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box Abhydrolase_2 PF02230.16 ORF152040 - 3.5e-05 23.7 0.0 8.6e-05 22.4 0.0 1.6 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF152040 - 0.00043 19.9 0.0 0.0016 18.0 0.0 1.9 2 0 0 2 2 2 1 Dienelactone hydrolase family WRNPLPNID PF15017.6 ORF152040 - 2.4 9.1 4.2 5 8.1 4.2 1.5 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box Abhydrolase_2 PF02230.16 ORF123808 - 3.5e-05 23.7 0.0 8.6e-05 22.4 0.0 1.6 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase DLH PF01738.18 ORF123808 - 0.00043 19.9 0.0 0.0016 18.0 0.0 1.9 2 0 0 2 2 2 1 Dienelactone hydrolase family WRNPLPNID PF15017.6 ORF123808 - 2.4 9.1 4.2 5 8.1 4.2 1.5 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box TMC PF07810.13 ORF71721 - 1.7e-09 38.2 5.2 6.6e-09 36.3 5.2 2.0 1 0 0 1 1 1 1 TMC domain YabA PF06156.13 ORF71721 - 0.067 13.8 7.2 0.25 12.0 7.2 2.0 1 0 0 1 1 1 0 Initiation control protein YabA SMBP PF16785.5 ORF71721 - 0.34 11.1 1.3 0.86 9.8 1.3 1.6 1 0 0 1 1 1 0 Small metal-binding protein Ninjurin PF04923.12 ORF71721 - 0.51 10.3 6.6 2.5 8.1 4.0 3.1 3 1 0 3 3 3 0 Ninjurin H-kinase_dim PF02895.14 ORF71721 - 0.51 10.8 2.9 1.2 9.6 2.9 1.6 1 0 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain LapA_dom PF06305.11 ORF71721 - 3.3 7.6 15.7 1.7 8.5 1.1 4.1 4 0 0 4 4 4 0 Lipopolysaccharide assembly protein A domain Plk4_PB2 PF18409.1 ORF71721 - 5.1 7.8 9.9 0.85 10.3 3.4 2.9 2 1 0 3 3 3 0 Polo-like Kinase 4 Polo Box 2 PanZ PF12568.8 ORF60961 - 0.021 14.5 1.3 0.085 12.6 0.2 2.3 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain, PanZ AMP-binding PF00501.28 ORF5177 - 2.9e-83 279.8 0.0 3.7e-83 279.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Involucrin_N PF10583.9 ORF5177 - 0.08 13.5 0.0 0.65 10.6 0.0 2.3 2 0 0 2 2 2 0 Involucrin of squamous epithelia N-terminus Clr5 PF14420.6 ORF5177 - 0.36 11.1 2.3 0.42 10.9 0.3 2.2 2 0 0 2 2 2 0 Clr5 domain Phage_T7_Capsid PF05396.11 ORF4768 - 1.8 8.9 20.3 0.34 11.3 0.2 5.5 5 2 1 6 6 6 0 Phage T7 capsid assembly protein DUF637 PF04830.13 ORF4768 - 3 7.6 6.5 1.7 8.5 0.5 3.2 3 1 1 4 4 4 0 Possible hemagglutinin (DUF637) PKD_channel PF08016.12 ORF41443 - 3.7e-16 58.8 22.0 9.8e-16 57.4 22.0 1.6 1 1 0 1 1 1 1 Polycystin cation channel Ion_trans PF00520.31 ORF41443 - 6.2e-12 45.3 20.9 9.8e-12 44.6 20.9 1.3 1 0 0 1 1 1 1 Ion transport protein DUF1664 PF07889.12 ORF41443 - 0.0066 16.5 2.1 0.073 13.1 0.4 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1664) NPV_P10 PF05531.12 ORF41443 - 0.047 14.2 0.3 3.9 8.0 0.1 2.5 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein FYRC PF05965.14 ORF41443 - 0.054 13.7 0.1 0.17 12.0 0.0 1.9 2 0 0 2 2 2 0 F/Y rich C-terminus Tropomyosin_1 PF12718.7 ORF41443 - 2 8.5 5.0 1.2 9.3 0.1 2.2 2 0 0 2 2 2 0 Tropomyosin like Helicase_C PF00271.31 ORF30236 - 1.2e-17 64.3 0.0 2.3e-17 63.3 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 ORF30236 - 3.8e-05 24.3 0.2 3.8e-05 24.3 0.2 2.1 2 0 0 2 2 2 1 RecQ zinc-binding HTH_40 PF14493.6 ORF30236 - 0.0029 18.0 0.0 0.016 15.6 0.0 2.2 1 0 0 1 1 1 1 Helix-turn-helix domain Replic_Relax PF13814.6 ORF30236 - 0.0099 16.0 0.8 0.04 14.0 0.5 2.0 2 0 0 2 2 2 1 Replication-relaxation RQC PF09382.10 ORF30236 - 0.041 13.7 0.0 1.2 9.0 0.0 2.6 2 0 0 2 2 2 0 RQC domain T2SSN PF01203.19 ORF30236 - 0.1 12.8 0.7 0.23 11.6 0.1 1.9 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein N XPC-binding PF09280.11 ORF30236 - 6.9 6.5 6.7 26 4.6 0.6 3.4 3 0 0 3 3 3 0 XPC-binding domain Helicase_C PF00271.31 ORF118144 - 1.2e-17 64.3 0.0 2.3e-17 63.3 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 ORF118144 - 3.8e-05 24.3 0.2 3.8e-05 24.3 0.2 2.1 2 0 0 2 2 2 1 RecQ zinc-binding HTH_40 PF14493.6 ORF118144 - 0.0029 18.0 0.0 0.016 15.6 0.0 2.2 1 0 0 1 1 1 1 Helix-turn-helix domain Replic_Relax PF13814.6 ORF118144 - 0.0099 16.0 0.8 0.04 14.0 0.5 2.0 2 0 0 2 2 2 1 Replication-relaxation RQC PF09382.10 ORF118144 - 0.041 13.7 0.0 1.2 9.0 0.0 2.6 2 0 0 2 2 2 0 RQC domain T2SSN PF01203.19 ORF118144 - 0.1 12.8 0.7 0.23 11.6 0.1 1.9 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein N XPC-binding PF09280.11 ORF118144 - 6.9 6.5 6.7 26 4.6 0.6 3.4 3 0 0 3 3 3 0 XPC-binding domain VSP PF03302.13 ORF89255 - 0.79 8.5 14.4 0.12 11.3 2.6 2.1 2 0 0 2 2 2 0 Giardia variant-specific surface protein TPR_12 PF13424.6 ORF73550 - 1.9e-19 69.7 10.3 1.4e-10 41.3 0.6 3.7 1 1 2 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF73550 - 2.6e-05 24.0 7.7 0.0036 17.3 0.6 4.4 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF73550 - 0.00011 22.0 5.4 0.0016 18.3 0.5 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF73550 - 0.0023 17.7 6.1 1.4 8.8 0.7 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF73550 - 0.018 15.2 4.9 1.3 9.4 0.2 4.0 3 0 0 3 3 3 0 Tetratricopeptide repeat BTAD PF03704.17 ORF73550 - 0.31 11.5 3.3 6.5 7.2 0.3 2.7 1 1 1 2 2 2 0 Bacterial transcriptional activator domain TPR_12 PF13424.6 ORF71607 - 1.9e-19 69.7 10.3 1.4e-10 41.3 0.6 3.7 1 1 2 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.17 ORF71607 - 2.6e-05 24.0 7.7 0.0036 17.3 0.6 4.4 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF71607 - 0.00011 22.0 5.4 0.0016 18.3 0.5 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF71607 - 0.0023 17.7 6.1 1.4 8.8 0.7 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 ORF71607 - 0.018 15.2 4.9 1.3 9.4 0.2 4.0 3 0 0 3 3 3 0 Tetratricopeptide repeat BTAD PF03704.17 ORF71607 - 0.31 11.5 3.3 6.5 7.2 0.3 2.7 1 1 1 2 2 2 0 Bacterial transcriptional activator domain Kinesin PF00225.23 ORF32911 - 3.9e-107 358.0 4.5 3.9e-107 358.0 4.5 2.3 2 1 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF32911 - 5.2e-25 88.1 0.3 5.2e-25 88.1 0.3 3.4 4 1 0 4 4 4 1 Microtubule binding DUF948 PF06103.11 ORF32911 - 0.089 13.1 0.4 0.089 13.1 0.4 4.3 4 1 0 4 4 4 0 Bacterial protein of unknown function (DUF948) SlyX PF04102.12 ORF32911 - 4.8 7.9 13.0 7.9 7.2 0.5 4.2 2 1 1 3 3 3 0 SlyX DUF229 PF02995.17 ORF84776 - 2.6e-22 79.1 14.1 7e-17 61.2 9.8 2.5 2 1 0 2 2 2 2 Protein of unknown function (DUF229) Sulfatase PF00884.23 ORF84776 - 4e-06 26.4 0.0 8.2e-06 25.4 0.0 1.6 1 1 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 ORF84776 - 0.0067 16.0 0.1 0.013 15.1 0.1 1.6 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF550 PF04447.12 ORF84776 - 0.031 14.4 0.0 0.097 12.8 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF550) Peptidase_U4 PF03419.13 ORF84776 - 1.5 8.0 12.0 2.7 7.2 12.0 1.3 1 0 0 1 1 1 0 Sporulation factor SpoIIGA UbiA PF01040.18 ORF84776 - 3.3 6.9 10.4 5.4 6.2 10.4 1.2 1 0 0 1 1 1 0 UbiA prenyltransferase family YyzF PF14116.6 ORF14109 - 0.0065 16.5 9.5 0.047 13.7 0.3 4.0 3 0 0 3 3 3 3 YyzF-like protein UvrD-helicase PF00580.21 ORF79211 - 2.6e-76 257.2 0.0 7.5e-76 255.6 0.0 1.8 2 0 0 2 2 2 1 UvrD/REP helicase N-terminal domain UvrD_C PF13361.6 ORF79211 - 3.7e-76 256.8 0.0 1.3e-75 254.9 0.0 1.9 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_19 PF13245.6 ORF79211 - 2.7e-32 112.1 0.0 8.4e-32 110.5 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF79211 - 5e-10 39.4 0.0 0.00019 21.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain UvrD_C_2 PF13538.6 ORF79211 - 8.3e-10 38.3 0.0 1.9e-09 37.2 0.0 1.7 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Exonuc_V_gamma PF04257.14 ORF79211 - 0.00032 19.1 2.3 0.0015 16.9 0.3 2.1 2 0 0 2 2 2 1 Exodeoxyribonuclease V, gamma subunit Viral_helicase1 PF01443.18 ORF79211 - 0.00078 19.2 0.0 1 9.1 0.0 3.2 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase PhoH PF02562.16 ORF79211 - 0.063 12.7 0.0 1.9 7.9 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein RHD3 PF05879.12 ORF48433 - 9.4e-122 407.6 25.3 3e-118 396.0 25.3 2.0 1 1 0 1 1 1 1 Root hair defective 3 GTP-binding protein (RHD3) MMR_HSR1 PF01926.23 ORF48433 - 1e-05 25.6 0.1 3.2e-05 24.0 0.1 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 ORF48433 - 0.00091 19.3 0.1 0.011 15.9 0.0 2.7 1 1 1 2 2 2 1 Dynamin family AAA_28 PF13521.6 ORF48433 - 0.0036 17.5 0.0 0.014 15.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain Roc PF08477.13 ORF48433 - 0.0064 16.7 0.3 0.023 14.9 0.0 2.1 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 ORF48433 - 0.08 13.5 0.1 0.59 10.6 0.0 2.5 2 0 0 2 2 2 0 ABC transporter eIF-4B PF06273.11 ORF48433 - 0.46 9.5 1.8 0.95 8.5 1.8 1.5 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B Ntox15 PF15604.6 ORF48433 - 0.73 9.9 3.7 4.2 7.5 0.3 2.7 2 0 0 2 2 2 0 Novel toxin 15 AAA_15 PF13175.6 ORF48433 - 4.9 6.8 38.0 29 4.2 32.0 3.1 1 1 1 2 2 2 0 AAA ATPase domain Kinesin PF00225.23 ORF36633 - 1.7e-96 323.0 0.0 2.9e-96 322.3 0.0 1.3 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 ORF36633 - 1.5e-20 73.7 0.3 9.8e-20 71.0 0.0 2.5 3 0 0 3 3 3 1 Microtubule binding Kinesin_assoc PF16183.5 ORF36633 - 6.8e-05 23.1 2.2 6.8e-05 23.1 2.2 4.1 3 2 1 4 4 4 1 Kinesin-associated MPS2 PF17060.5 ORF36633 - 0.00072 18.9 1.8 0.00072 18.9 1.8 1.7 2 0 0 2 2 2 1 Monopolar spindle protein 2 FAM76 PF16046.5 ORF36633 - 0.025 14.0 0.2 0.025 14.0 0.2 2.7 2 1 0 2 2 2 0 FAM76 protein UPF0242 PF06785.11 ORF36633 - 0.64 10.1 12.0 1.1 9.3 0.5 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF4510 PF14971.6 ORF36633 - 1.5 9.1 7.5 0.95 9.8 0.4 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4510) Hpt PF01627.23 ORF36633 - 2.5 8.4 11.0 0.1 12.9 1.6 3.0 3 0 0 3 3 3 0 Hpt domain PKcGMP_CC PF16808.5 ORF36633 - 4.4 7.2 9.6 0.62 10.0 4.8 2.1 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Atg14 PF10186.9 ORF36633 - 6.7 5.7 11.2 4 6.4 0.7 2.2 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 ERM PF00769.19 ORF36633 - 7.5 6.3 22.3 4.4 7.1 5.0 2.6 2 0 0 2 2 2 0 Ezrin/radixin/moesin family MerR-DNA-bind PF09278.11 ORF36633 - 7.8 7.1 14.3 0.28 11.8 5.8 2.7 2 1 0 2 2 2 0 MerR, DNA binding Ion_trans PF00520.31 ORF117484 - 4.6e-06 26.1 27.8 4.6e-06 26.1 27.8 3.4 2 2 0 2 2 2 1 Ion transport protein DUF818 PF05677.12 ORF75026 - 0.00011 21.3 3.1 0.003 16.6 0.0 2.4 2 0 0 2 2 2 2 Chlamydia CHLPS protein (DUF818) Peptidase_S15 PF02129.18 ORF75026 - 0.00017 21.3 0.0 0.00026 20.7 0.0 1.3 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) EI24 PF07264.11 ORF75026 - 0.0056 16.9 2.4 0.011 16.0 2.4 1.4 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) Hydrolase_4 PF12146.8 ORF75026 - 0.0064 15.8 0.0 0.017 14.4 0.0 1.7 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF75026 - 0.0067 16.1 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold BAAT_C PF08840.11 ORF75026 - 0.064 13.2 0.1 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_6 PF12697.7 ORF75026 - 0.23 12.0 0.0 0.41 11.2 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF818 PF05677.12 ORF49803 - 0.00011 21.3 3.1 0.003 16.6 0.0 2.4 2 0 0 2 2 2 2 Chlamydia CHLPS protein (DUF818) Peptidase_S15 PF02129.18 ORF49803 - 0.00017 21.3 0.0 0.00026 20.7 0.0 1.3 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) EI24 PF07264.11 ORF49803 - 0.0056 16.9 2.4 0.011 16.0 2.4 1.4 1 0 0 1 1 1 1 Etoposide-induced protein 2.4 (EI24) Hydrolase_4 PF12146.8 ORF49803 - 0.0064 15.8 0.0 0.017 14.4 0.0 1.7 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF49803 - 0.0067 16.1 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold BAAT_C PF08840.11 ORF49803 - 0.064 13.2 0.1 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_6 PF12697.7 ORF49803 - 0.23 12.0 0.0 0.41 11.2 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family BTB PF00651.31 ORF107032 - 0.00065 19.9 0.0 0.0013 18.9 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain TPR_1 PF00515.28 ORF97298 - 2e-33 112.8 39.7 1.4e-05 24.7 0.0 11.4 11 0 0 11 11 11 8 Tetratricopeptide repeat TPR_2 PF07719.17 ORF97298 - 6.7e-29 97.6 35.9 0.00083 19.3 0.0 12.3 13 0 0 13 13 13 8 Tetratricopeptide repeat TPR_12 PF13424.6 ORF97298 - 8.7e-24 83.6 15.5 2e-06 28.0 0.1 8.6 4 3 5 9 9 9 8 Tetratricopeptide repeat TPR_8 PF13181.6 ORF97298 - 6e-19 66.6 43.7 0.00054 20.0 0.0 12.8 13 0 0 13 13 13 5 Tetratricopeptide repeat TPR_7 PF13176.6 ORF97298 - 4.6e-16 57.6 14.4 0.16 12.1 0.0 9.8 10 1 0 11 11 10 6 Tetratricopeptide repeat TPR_6 PF13174.6 ORF97298 - 7.4e-16 57.7 13.9 0.062 14.0 0.0 10.0 9 0 0 9 9 9 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF97298 - 9.6e-15 54.9 11.1 0.00031 21.2 0.0 6.6 5 2 3 8 8 7 5 Tetratricopeptide repeat TPR_14 PF13428.6 ORF97298 - 2.4e-13 49.7 0.0 0.066 14.1 0.0 8.7 6 3 6 12 12 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF97298 - 1.9e-12 47.6 0.0 0.0028 18.3 0.0 6.4 3 2 3 6 6 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF97298 - 1.3e-11 44.5 25.5 2.8e-05 24.3 1.6 6.2 6 1 1 7 7 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 ORF97298 - 1.8e-11 43.6 17.0 0.017 14.8 0.0 8.9 7 1 1 8 8 8 2 TPR repeat TPR_9 PF13371.6 ORF97298 - 5.3e-06 26.5 0.0 0.11 12.7 0.0 4.0 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF97298 - 2.3e-05 24.4 18.9 0.5 10.9 0.2 8.7 11 0 0 11 11 7 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF97298 - 0.0003 20.6 18.5 1.7 8.6 0.0 7.7 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_15 PF13429.6 ORF97298 - 0.024 13.8 1.1 0.12 11.6 0.0 2.5 2 1 0 2 2 2 0 Tetratricopeptide repeat Sel1 PF08238.12 ORF97298 - 0.026 15.2 5.8 5.8 7.7 0.0 6.0 5 0 0 5 5 5 0 Sel1 repeat TPR_21 PF09976.9 ORF97298 - 0.031 14.0 5.7 0.066 12.9 1.5 3.1 2 1 0 2 2 2 0 Tetratricopeptide repeat-like domain TPR_20 PF14561.6 ORF97298 - 0.54 10.6 3.9 6 7.3 0.0 4.6 5 2 2 7 7 4 0 Tetratricopeptide repeat 23S_rRNA_IVP PF05635.11 ORF97298 - 0.94 9.8 8.5 3 8.2 0.4 4.2 3 0 0 3 3 3 0 23S rRNA-intervening sequence protein PPR PF01535.20 ORF97298 - 0.95 9.9 11.6 39 4.8 0.1 6.0 6 0 0 6 6 6 0 PPR repeat SPO22 PF08631.10 ORF97298 - 1.4 8.3 7.4 7.9 5.9 0.0 4.4 2 2 2 4 4 4 0 Meiosis protein SPO22/ZIP4 like DUF3808 PF10300.9 ORF97298 - 2.5 6.8 16.5 0.065 12.0 5.5 3.5 3 2 1 4 4 4 0 Protein of unknown function (DUF3808) PKD_channel PF08016.12 ORF95666 - 1.8e-14 53.3 31.9 2.7e-13 49.4 19.9 2.3 2 0 0 2 2 2 2 Polycystin cation channel Neur_chan_memb PF02932.16 ORF95666 - 4.1 7.4 6.6 0.18 11.8 0.5 1.9 2 0 0 2 2 2 0 Neurotransmitter-gated ion-channel transmembrane region HSCB_C PF07743.13 ORF95666 - 4.5 7.8 8.6 0.32 11.5 1.7 2.5 2 1 1 3 3 3 0 HSCB C-terminal oligomerisation domain HSP90 PF00183.18 ORF8897 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF8897 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF8897 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF8897 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF8897 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF8897 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF8897 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein RICTOR_N PF14664.6 ORF71601 - 1.3e-39 136.3 12.7 3.1e-38 131.7 12.7 2.4 1 1 0 1 1 1 1 Rapamycin-insensitive companion of mTOR, N-term RICTOR_M PF14666.6 ORF71601 - 1.8e-06 27.7 1.2 0.00048 19.9 0.1 3.5 2 0 0 2 2 2 2 Rapamycin-insensitive companion of mTOR, middle domain HSP90 PF00183.18 ORF59842 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF59842 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF59842 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF59842 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF59842 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF59842 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF59842 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF51669 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF51669 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF51669 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF51669 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF51669 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF51669 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF51669 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF49495 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF49495 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF49495 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF49495 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF49495 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF49495 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF49495 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein TPR_1 PF00515.28 ORF39630 - 2e-33 112.8 39.7 1.4e-05 24.7 0.0 11.4 11 0 0 11 11 11 8 Tetratricopeptide repeat TPR_2 PF07719.17 ORF39630 - 6.7e-29 97.6 35.9 0.00083 19.3 0.0 12.3 13 0 0 13 13 13 8 Tetratricopeptide repeat TPR_12 PF13424.6 ORF39630 - 8.7e-24 83.6 15.5 2e-06 28.0 0.1 8.6 4 3 5 9 9 9 8 Tetratricopeptide repeat TPR_8 PF13181.6 ORF39630 - 6e-19 66.6 43.7 0.00054 20.0 0.0 12.8 13 0 0 13 13 13 5 Tetratricopeptide repeat TPR_7 PF13176.6 ORF39630 - 4.6e-16 57.6 14.4 0.16 12.1 0.0 9.8 10 1 0 11 11 10 6 Tetratricopeptide repeat TPR_6 PF13174.6 ORF39630 - 7.4e-16 57.7 13.9 0.062 14.0 0.0 10.0 9 0 0 9 9 9 4 Tetratricopeptide repeat TPR_19 PF14559.6 ORF39630 - 9.6e-15 54.9 11.1 0.00031 21.2 0.0 6.6 5 2 3 8 8 7 5 Tetratricopeptide repeat TPR_14 PF13428.6 ORF39630 - 2.4e-13 49.7 0.0 0.066 14.1 0.0 8.7 6 3 6 12 12 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 ORF39630 - 1.9e-12 47.6 0.0 0.0028 18.3 0.0 6.4 3 2 3 6 6 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 ORF39630 - 1.3e-11 44.5 25.5 2.8e-05 24.3 1.6 6.2 6 1 1 7 7 6 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 ORF39630 - 1.8e-11 43.6 17.0 0.017 14.8 0.0 8.9 7 1 1 8 8 8 2 TPR repeat TPR_9 PF13371.6 ORF39630 - 5.3e-06 26.5 0.0 0.11 12.7 0.0 4.0 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 ORF39630 - 2.3e-05 24.4 18.9 0.5 10.9 0.2 8.7 11 0 0 11 11 7 1 Tetratricopeptide repeat TPR_10 PF13374.6 ORF39630 - 0.0003 20.6 18.5 1.7 8.6 0.0 7.7 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_15 PF13429.6 ORF39630 - 0.024 13.8 1.1 0.12 11.6 0.0 2.5 2 1 0 2 2 2 0 Tetratricopeptide repeat Sel1 PF08238.12 ORF39630 - 0.026 15.2 5.8 5.8 7.7 0.0 6.0 5 0 0 5 5 5 0 Sel1 repeat TPR_21 PF09976.9 ORF39630 - 0.031 14.0 5.7 0.066 12.9 1.5 3.1 2 1 0 2 2 2 0 Tetratricopeptide repeat-like domain TPR_20 PF14561.6 ORF39630 - 0.54 10.6 3.9 6 7.3 0.0 4.6 5 2 2 7 7 4 0 Tetratricopeptide repeat 23S_rRNA_IVP PF05635.11 ORF39630 - 0.94 9.8 8.5 3 8.2 0.4 4.2 3 0 0 3 3 3 0 23S rRNA-intervening sequence protein PPR PF01535.20 ORF39630 - 0.95 9.9 11.6 39 4.8 0.1 6.0 6 0 0 6 6 6 0 PPR repeat SPO22 PF08631.10 ORF39630 - 1.4 8.3 7.4 7.9 5.9 0.0 4.4 2 2 2 4 4 4 0 Meiosis protein SPO22/ZIP4 like DUF3808 PF10300.9 ORF39630 - 2.5 6.8 16.5 0.065 12.0 5.5 3.5 3 2 1 4 4 4 0 Protein of unknown function (DUF3808) RICTOR_N PF14664.6 ORF38643 - 1.3e-39 136.3 12.7 3.1e-38 131.7 12.7 2.4 1 1 0 1 1 1 1 Rapamycin-insensitive companion of mTOR, N-term RICTOR_M PF14666.6 ORF38643 - 1.8e-06 27.7 1.2 0.00048 19.9 0.1 3.5 2 0 0 2 2 2 2 Rapamycin-insensitive companion of mTOR, middle domain HELP PF03451.14 ORF35588 - 1.9e-20 72.5 0.1 3.8e-20 71.5 0.1 1.5 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF35588 - 2.9e-19 69.0 23.9 0.0058 17.4 0.0 9.5 9 0 0 9 9 9 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF35588 - 1.4e-10 41.4 0.5 0.00075 19.8 0.0 4.8 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain Me-amine-dh_H PF06433.11 ORF35588 - 0.073 11.9 0.2 0.46 9.3 0.0 2.1 2 0 0 2 2 2 0 Methylamine dehydrogenase heavy chain (MADH) WD40_like PF17005.5 ORF35588 - 0.11 11.8 6.3 0.5 9.6 0.6 3.3 2 1 0 3 3 3 0 WD40-like domain Leu_Phe_trans PF03588.14 ORF35588 - 0.15 11.6 0.1 6 6.4 0.0 2.8 3 0 0 3 3 3 0 Leucyl/phenylalanyl-tRNA protein transferase HSP90 PF00183.18 ORF34430 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF34430 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF34430 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF34430 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF34430 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF34430 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF34430 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF131453 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF131453 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF131453 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF131453 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF131453 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF131453 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF131453 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein HSP90 PF00183.18 ORF125558 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF125558 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF125558 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF125558 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF125558 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF125558 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF125558 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein 2OG-FeII_Oxy_2 PF13532.6 ORF112120 - 1.5e-13 51.4 0.1 1.7e-12 47.9 0.0 2.5 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily Methyltransf_11 PF08241.12 ORF112120 - 7.5e-12 45.7 0.0 2.4e-11 44.1 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF112120 - 4.9e-09 36.8 0.0 1.9e-08 34.9 0.0 2.1 1 0 0 1 1 1 1 Methyltransferase domain RRM_1 PF00076.22 ORF112120 - 4.1e-08 32.9 0.3 3e-05 23.7 0.0 3.2 3 0 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Methyltransf_12 PF08242.12 ORF112120 - 2.6e-05 24.9 0.1 9.4e-05 23.1 0.1 2.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF112120 - 5.8e-05 22.9 0.1 0.00018 21.3 0.1 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF112120 - 0.0013 18.6 0.0 0.0061 16.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain HSP90 PF00183.18 ORF103515 - 1.7e-229 763.0 32.7 2.3e-229 762.6 32.7 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 ORF103515 - 4.1e-15 56.3 0.1 8.8e-15 55.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 ORF103515 - 2.4e-09 37.2 0.1 6.2e-09 35.8 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 ORF103515 - 0.017 15.2 0.1 0.063 13.3 0.1 2.0 1 0 0 1 1 1 0 Tumour suppressor protein Cofac_haem_bdg PF04187.13 ORF103515 - 0.048 13.6 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Haem-binding uptake, Tiki superfamily, ChaN Zip PF02535.22 ORF103515 - 0.5 9.5 2.7 1.2 8.3 2.7 1.6 1 0 0 1 1 1 0 ZIP Zinc transporter LMBR1 PF04791.16 ORF103515 - 9.9 4.9 6.1 18 4.1 6.1 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein ERGIC_N PF13850.6 ORF89840 - 0.033 14.5 1.0 0.17 12.3 1.0 2.3 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Toprim_Crpt PF13342.6 ORF5264 - 0.056 13.4 0.7 0.14 12.2 0.7 1.6 1 0 0 1 1 1 0 C-terminal repeat of topoisomerase TRP PF06011.12 ORF5264 - 3.6 6.2 25.7 4.2 6.0 20.2 2.7 2 1 0 2 2 2 0 Transient receptor potential (TRP) ion channel DUF4551 PF15087.6 ORF5264 - 5.6 5.7 18.3 8.2 5.1 18.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) Septin PF00735.18 ORF38667 - 2.5e-17 63.1 4.7 7.2e-17 61.6 4.7 1.8 1 1 0 1 1 1 1 Septin MMR_HSR1 PF01926.23 ORF38667 - 0.0011 19.1 0.2 0.013 15.5 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase MgsA_C PF12002.8 ORF38667 - 0.0078 16.2 0.8 0.02 14.9 0.8 1.6 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal DUF1884 PF08967.10 ORF38667 - 0.47 10.7 2.7 2.7 8.3 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF1884) AAA_18 PF13238.6 ORF38667 - 2.3 8.8 6.9 0.75 10.4 0.4 3.3 3 1 0 3 3 3 0 AAA domain Toprim_Crpt PF13342.6 ORF28877 - 0.055 13.4 0.7 0.14 12.2 0.7 1.6 1 0 0 1 1 1 0 C-terminal repeat of topoisomerase Ground-like PF04155.18 ORF28877 - 0.97 10.1 6.7 14 6.4 0.1 3.1 3 0 0 3 3 3 0 Ground-like domain DUF4551 PF15087.6 ORF28877 - 5.6 5.7 18.3 8.2 5.1 18.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) TRP PF06011.12 ORF28877 - 8.3 5.0 27.8 2.3 6.8 19.7 2.7 1 1 1 2 2 2 0 Transient receptor potential (TRP) ion channel Septin PF00735.18 ORF23545 - 2.5e-17 63.1 4.7 7.2e-17 61.6 4.7 1.8 1 1 0 1 1 1 1 Septin MMR_HSR1 PF01926.23 ORF23545 - 0.0011 19.1 0.2 0.013 15.5 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase MgsA_C PF12002.8 ORF23545 - 0.0078 16.2 0.8 0.02 14.9 0.8 1.6 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal DUF1884 PF08967.10 ORF23545 - 0.47 10.7 2.7 2.7 8.3 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF1884) AAA_18 PF13238.6 ORF23545 - 2.3 8.8 6.9 0.75 10.4 0.4 3.3 3 1 0 3 3 3 0 AAA domain HELP PF03451.14 ORF136622 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF136622 - 2.3e-18 66.2 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF136622 - 4e-09 36.6 0.0 0.00011 22.4 0.0 4.7 4 1 0 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain DEAD PF00270.29 ORF111941 - 1.2e-43 148.9 0.0 2.4e-43 147.9 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 ORF111941 - 3.2e-30 104.7 0.3 3.4e-28 98.2 0.0 3.5 3 1 1 4 4 4 1 Helicase conserved C-terminal domain GUCT PF08152.12 ORF111941 - 1.5e-21 76.5 0.2 5.5e-21 74.7 0.1 2.1 2 0 0 2 2 2 1 GUCT (NUC152) domain ERCC3_RAD25_C PF16203.5 ORF111941 - 0.0004 19.7 0.0 0.0011 18.3 0.0 1.7 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase EGF_2 PF07974.13 ORF79298 - 0.16 12.4 11.5 0.3 11.5 11.5 1.4 1 0 0 1 1 1 0 EGF-like domain EGF PF00008.27 ORF79298 - 0.61 10.4 6.5 1.2 9.5 6.5 1.4 1 0 0 1 1 1 0 EGF-like domain Laminin_EGF PF00053.24 ORF79298 - 1.1 9.4 9.9 2.4 8.4 9.9 1.4 1 0 0 1 1 1 0 Laminin EGF domain STAS PF01740.21 ORF43258 - 2e-11 43.5 0.0 4.1e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 STAS domain Sulfate_transp PF00916.20 ORF43258 - 3.2e-09 36.0 2.3 6e-09 35.1 2.3 1.5 1 0 0 1 1 1 1 Sulfate permease family cNMP_binding PF00027.29 ORF43258 - 0.00017 21.6 0.0 0.003 17.6 0.0 2.4 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain STAS_2 PF13466.6 ORF43258 - 0.00038 20.7 0.5 0.00038 20.7 0.5 2.9 3 1 0 3 3 3 1 STAS domain MFS_MOT1 PF16983.5 ORF43258 - 0.0039 17.6 0.9 0.0039 17.6 0.9 2.5 2 0 0 2 2 2 1 Molybdate transporter of MFS superfamily tRNA-synt_2c PF01411.19 ORF38528 - 2.6e-36 125.3 0.0 2.1e-31 109.1 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II (A) tRNA_SAD PF07973.14 ORF38528 - 2.3e-10 40.4 0.9 6.3e-10 39.0 0.9 1.8 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Csm2_III-A PF03750.13 ORF24768 - 0.01 16.6 1.4 1.3 9.9 0.0 2.9 2 0 0 2 2 2 0 Csm2 Type III-A PsaA_PsaB PF00223.19 ORF140151 - 1.1e-156 523.0 45.5 1.1e-126 423.9 27.4 3.8 1 1 1 2 2 2 2 Photosystem I psaA/psaB protein HTH_9 PF08221.11 ORF140151 - 0.014 15.4 1.2 0.49 10.5 1.0 2.6 1 1 1 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain ERGIC_N PF13850.6 ORF7712 - 0.052 13.9 0.2 0.22 11.9 0.2 2.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) zf-RING_UBOX PF13445.6 ORF69227 - 3.1e-08 33.5 7.7 5.4e-08 32.7 6.5 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF69227 - 9.5e-07 28.7 3.5 3.3e-06 26.9 3.5 2.0 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF69227 - 1.9e-06 27.6 7.8 5.2e-06 26.2 7.8 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF69227 - 7.4e-06 26.2 9.8 2.3e-05 24.6 9.8 1.9 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF69227 - 1.1e-05 25.2 5.6 2.3e-05 24.2 5.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF69227 - 0.00023 20.9 6.0 0.0013 18.5 6.1 2.3 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF69227 - 0.00027 21.0 7.8 0.00072 19.7 7.8 1.8 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 ORF69227 - 0.00047 19.9 8.3 0.0048 16.7 8.8 2.4 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-Di19 PF05605.12 ORF69227 - 0.0058 16.9 2.6 0.44 10.9 0.3 3.3 3 0 0 3 3 3 1 Drought induced 19 protein (Di19), zinc-binding zf-ANAPC11 PF12861.7 ORF69227 - 0.1 12.7 2.8 0.26 11.4 2.8 1.7 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-rbx1 PF12678.7 ORF69227 - 0.12 12.7 9.2 0.38 11.1 9.2 1.9 1 0 0 1 1 1 0 RING-H2 zinc finger domain FYVE PF01363.21 ORF69227 - 0.31 11.2 2.3 1.2 9.4 2.3 2.1 1 0 0 1 1 1 0 FYVE zinc finger zf-MIZ PF02891.20 ORF69227 - 5.1 6.9 11.5 8.4 6.2 0.1 2.5 1 1 1 2 2 2 0 MIZ/SP-RING zinc finger zf-RING_4 PF14570.6 ORF69227 - 9.8 6.1 7.9 9.4 6.1 0.1 2.7 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain MM_CoA_mutase PF01642.22 ORF23814 - 1e-236 786.4 0.5 1.2e-236 786.2 0.5 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase B12-binding PF02310.19 ORF23814 - 4.1e-16 59.1 0.8 8.2e-16 58.1 0.1 1.9 2 0 0 2 2 2 1 B12 binding domain sCache_like PF16736.5 ORF23814 - 0.0019 18.3 1.4 0.0037 17.3 1.2 1.6 1 1 0 1 1 1 1 Single Cache-like RE_Eco29kI PF09517.10 ORF23814 - 0.054 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Eco29kI restriction endonuclease TetR_C_11 PF16859.5 ORF23814 - 0.11 12.8 4.2 0.12 12.7 2.1 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Arm PF00514.23 ORF722 - 4.4e-46 153.6 28.2 2.3e-06 27.5 0.1 13.3 13 1 0 13 13 13 10 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF722 - 3.7e-09 36.9 34.5 0.0046 17.4 1.1 9.1 6 4 2 9 9 9 4 HEAT-like repeat HEAT_2 PF13646.6 ORF722 - 7.8e-08 32.6 35.4 0.0016 18.8 4.8 7.1 3 2 3 7 7 7 4 HEAT repeats Atx10homo_assoc PF09759.9 ORF722 - 1.6e-07 31.2 0.0 0.022 14.7 0.0 5.0 4 2 0 4 4 4 1 Spinocerebellar ataxia type 10 protein domain Cnd1 PF12717.7 ORF722 - 1.8e-07 31.4 0.9 0.00012 22.2 0.0 4.1 4 2 0 4 4 4 1 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 ORF722 - 1.5e-06 27.9 13.4 0.029 14.6 0.0 8.1 8 0 0 8 8 8 2 HEAT repeat V-ATPase_H_N PF03224.14 ORF722 - 7.1e-06 25.5 0.0 0.031 13.5 0.0 2.8 1 1 1 2 2 2 2 V-ATPase subunit H Adaptin_N PF01602.20 ORF722 - 1.3e-05 24.0 0.1 0.03 12.9 0.1 3.6 2 1 0 2 2 2 1 Adaptin N terminal region Arm_2 PF04826.13 ORF722 - 3.8e-05 23.3 0.1 0.049 13.1 0.0 3.6 2 2 1 3 3 3 1 Armadillo-like KAP PF05804.12 ORF722 - 0.0012 17.1 0.0 0.045 11.9 0.0 2.2 1 1 1 2 2 2 1 Kinesin-associated protein (KAP) RTP1_C1 PF10363.9 ORF722 - 0.052 13.7 0.1 0.34 11.1 0.1 2.5 1 0 0 1 1 1 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF937 PF06078.11 ORF722 - 0.07 13.7 0.0 0.07 13.7 0.0 3.8 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF937) Pkinase PF00069.25 ORF62225 - 3.6e-76 256.0 0.1 3.6e-76 256.0 0.1 2.7 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF62225 - 2.2e-42 145.2 0.0 4.8e-42 144.0 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF62225 - 2.3e-07 30.4 0.0 4e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF62225 - 0.00026 20.4 0.4 0.00056 19.3 0.4 1.6 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 ORF61183 - 3.6e-76 256.0 0.1 3.6e-76 256.0 0.1 2.7 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF61183 - 2.2e-42 145.2 0.0 4.8e-42 144.0 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF61183 - 2.3e-07 30.4 0.0 4e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF61183 - 0.00026 20.4 0.4 0.00056 19.3 0.4 1.6 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family HELP PF03451.14 ORF52944 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF52944 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF52944 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain HELP PF03451.14 ORF143569 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF143569 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF143569 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain tRNA-synt_1 PF00133.22 ORF141047 - 5.4e-74 249.5 0.0 8.7e-74 248.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF141047 - 2.8e-23 82.5 0.2 1e-22 80.7 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF141047 - 0.0029 16.4 0.2 0.07 11.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF141047 - 0.029 13.7 0.0 0.065 12.6 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain HELP PF03451.14 ORF135005 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF135005 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF135005 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain Pkinase PF00069.25 ORF129187 - 3.6e-76 256.0 0.1 3.6e-76 256.0 0.1 2.7 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF129187 - 2.2e-42 145.2 0.0 4.8e-42 144.0 0.0 1.6 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF129187 - 2.3e-07 30.4 0.0 4e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF129187 - 0.00026 20.4 0.4 0.00056 19.3 0.4 1.6 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family HELP PF03451.14 ORF110020 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF110020 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF110020 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain HELP PF03451.14 ORF102848 - 6.3e-21 74.0 0.1 1.4e-20 72.9 0.1 1.6 1 0 0 1 1 1 1 HELP motif WD40 PF00400.32 ORF102848 - 2.1e-18 66.3 26.2 0.0076 17.1 0.0 9.8 11 0 0 11 11 11 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF102848 - 3.9e-09 36.7 0.0 0.00011 22.5 0.0 4.7 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain AP_endonuc_2 PF01261.24 ORF138609 - 0.0076 15.7 1.6 2.2 7.7 0.2 2.5 2 0 0 2 2 2 2 Xylose isomerase-like TIM barrel DUF1374 PF07118.11 ORF138609 - 0.035 14.6 0.8 0.15 12.6 0.8 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1374) DUF3659 PF12396.8 ORF8765 - 3.1e-07 30.2 40.5 0.035 14.0 0.6 6.7 4 3 2 6 6 6 6 Protein of unknown function (DUF3659) FliC PF12445.8 ORF8765 - 0.0092 16.3 1.0 0.29 11.5 0.1 2.7 2 0 0 2 2 2 1 Flagellin protein DUF2973 PF11189.8 ORF8765 - 2.2 8.4 3.5 28 4.9 0.0 4.1 4 1 0 4 4 4 0 Protein of unknown function (DUF2973) APC_N_CC PF16689.5 ORF76046 - 0.0032 17.5 1.9 0.0032 17.5 1.9 2.8 2 0 0 2 2 2 1 Coiled-coil N-terminus of APC, dimerisation domain TSC22 PF01166.18 ORF76046 - 0.076 13.3 3.5 2.9 8.3 0.3 3.3 3 0 0 3 3 3 0 TSC-22/dip/bun family NYD-SP28_assoc PF14775.6 ORF76046 - 0.62 10.2 4.4 2.6 8.2 0.8 2.6 2 0 0 2 2 2 0 Sperm tail C-terminal domain ABC_tran_CTD PF16326.5 ORF76046 - 1.1 9.5 6.5 2.9 8.2 6.0 2.0 1 1 0 1 1 1 0 ABC transporter C-terminal domain Arm PF00514.23 ORF68658 - 3.3e-46 154.0 27.8 2.3e-06 27.5 0.1 13.3 13 1 0 13 13 13 10 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 ORF68658 - 3.6e-09 36.9 34.4 0.0046 17.4 1.1 9.1 6 4 2 9 9 9 4 HEAT-like repeat HEAT_2 PF13646.6 ORF68658 - 3.9e-08 33.6 34.9 0.0011 19.3 3.8 7.1 3 2 3 7 7 7 4 HEAT repeats Cnd1 PF12717.7 ORF68658 - 2.2e-07 31.0 1.0 0.00012 22.2 0.0 4.0 4 2 0 4 4 4 1 non-SMC mitotic condensation complex subunit 1 Atx10homo_assoc PF09759.9 ORF68658 - 3.6e-07 30.1 0.0 0.022 14.7 0.0 4.9 4 2 0 4 4 4 1 Spinocerebellar ataxia type 10 protein domain HEAT PF02985.22 ORF68658 - 1e-06 28.4 13.3 0.028 14.6 0.0 8.2 8 0 0 8 8 8 2 HEAT repeat V-ATPase_H_N PF03224.14 ORF68658 - 7e-06 25.5 0.0 0.028 13.7 0.0 2.8 1 1 0 2 2 2 2 V-ATPase subunit H Adaptin_N PF01602.20 ORF68658 - 1.2e-05 24.1 0.1 0.61 8.6 0.0 3.8 2 1 1 3 3 3 2 Adaptin N terminal region Arm_2 PF04826.13 ORF68658 - 3.7e-05 23.3 0.1 0.047 13.1 0.0 3.6 1 1 2 3 3 3 1 Armadillo-like KAP PF05804.12 ORF68658 - 0.0011 17.2 0.0 0.045 11.9 0.0 2.2 1 1 1 2 2 2 1 Kinesin-associated protein (KAP) RTP1_C1 PF10363.9 ORF68658 - 0.054 13.7 0.2 0.34 11.1 0.1 2.5 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 Dicistro_VP4 PF11492.8 ORF68658 - 5.9 6.9 6.7 1 9.4 0.5 3.0 2 0 0 2 2 2 0 Cricket paralysis virus, VP4 tRNA-synt_1 PF00133.22 ORF151659 - 5.3e-74 249.5 0.0 8.7e-74 248.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF151659 - 2.7e-23 82.6 0.2 1e-22 80.8 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF151659 - 0.0029 16.4 0.2 0.07 11.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF151659 - 0.028 13.7 0.0 0.065 12.6 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain RE_BstXI PF09552.10 ORF130904 - 0.07 12.3 0.1 0.11 11.7 0.1 1.2 1 0 0 1 1 1 0 BstXI restriction endonuclease DUF1195 PF06708.11 ORF127809 - 0.0067 16.2 0.0 0.016 15.0 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) ERGIC_N PF13850.6 ORF127809 - 0.019 15.3 0.6 0.081 13.3 0.1 2.3 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ribosomal_L30 PF00327.20 ORF127809 - 0.11 12.4 0.0 0.36 10.7 0.0 1.9 1 0 0 1 1 1 0 Ribosomal protein L30p/L7e tRNA-synt_1 PF00133.22 ORF11901 - 5.3e-74 249.5 0.0 8.7e-74 248.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF11901 - 2.8e-23 82.6 0.2 1e-22 80.8 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF11901 - 0.0029 16.4 0.2 0.07 11.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF11901 - 0.029 13.7 0.0 0.065 12.6 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 ORF112828 - 5.3e-74 249.5 0.0 8.7e-74 248.8 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 ORF112828 - 2.8e-23 82.6 0.2 1e-22 80.8 0.1 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 ORF112828 - 0.0029 16.4 0.2 0.07 11.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 ORF112828 - 0.029 13.7 0.0 0.065 12.6 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain GvpL_GvpF PF06386.11 ORF117072 - 0.035 14.0 0.8 0.35 10.8 1.5 2.3 2 0 0 2 2 2 0 Gas vesicle synthesis protein GvpL/GvpF DUF1195 PF06708.11 ORF50368 - 0.007 16.1 0.0 0.016 15.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) ERGIC_N PF13850.6 ORF50368 - 0.02 15.2 0.6 0.081 13.3 0.1 2.2 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ribosomal_L30 PF00327.20 ORF50368 - 0.11 12.4 0.0 0.36 10.7 0.0 1.8 1 0 0 1 1 1 0 Ribosomal protein L30p/L7e CENP-Q PF13094.6 ORF41125 - 0.043 14.0 4.3 0.11 12.7 4.3 1.7 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF1195 PF06708.11 ORF23107 - 0.0067 16.2 0.0 0.016 15.0 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) ERGIC_N PF13850.6 ORF23107 - 0.02 15.2 0.6 0.081 13.3 0.1 2.2 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ribosomal_L30 PF00327.20 ORF23107 - 0.11 12.4 0.0 0.36 10.7 0.0 1.8 1 0 0 1 1 1 0 Ribosomal protein L30p/L7e DUF1195 PF06708.11 ORF149592 - 0.007 16.1 0.0 0.016 15.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) ERGIC_N PF13850.6 ORF149592 - 0.02 15.2 0.6 0.081 13.3 0.1 2.2 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ribosomal_L30 PF00327.20 ORF149592 - 0.11 12.4 0.0 0.36 10.7 0.0 1.8 1 0 0 1 1 1 0 Ribosomal protein L30p/L7e Ank_2 PF12796.7 ORF145208 - 4.9e-17 62.3 1.5 2.2e-11 44.2 0.6 3.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF145208 - 1.1e-13 51.4 1.3 3.4e-06 27.5 0.1 5.0 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF145208 - 1e-12 48.0 3.7 1.8e-05 24.9 0.0 6.0 3 1 3 6 6 6 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF145208 - 1.7e-11 43.3 1.4 0.034 14.7 0.0 5.5 4 0 0 4 4 4 4 Ankyrin repeat DHHC PF01529.20 ORF145208 - 5.1e-09 36.3 12.2 5.1e-09 36.3 12.2 2.5 2 0 0 2 2 2 1 DHHC palmitoyltransferase Ank PF00023.30 ORF145208 - 0.013 15.9 0.2 1.5 9.4 0.0 4.0 4 0 0 4 4 4 0 Ankyrin repeat ABC_tran PF00005.27 ORF133330 - 4.9e-44 150.2 5.7 1e-21 77.9 0.2 3.4 4 1 0 4 4 2 2 ABC transporter ABC_tran_Xtn PF12848.7 ORF133330 - 2.6e-20 72.2 4.3 2.6e-20 72.2 4.3 3.0 4 0 0 4 4 2 1 ABC transporter AAA_21 PF13304.6 ORF133330 - 5.5e-16 59.3 3.8 0.0022 17.9 0.3 4.5 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF133330 - 1.5e-10 40.9 5.6 0.0022 17.5 0.0 4.0 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain NACHT PF05729.12 ORF133330 - 2.7e-07 30.7 0.0 0.019 14.9 0.0 2.4 2 0 0 2 2 2 2 NACHT domain NB-ARC PF00931.22 ORF133330 - 3.3e-07 29.8 0.0 0.0024 17.1 0.0 2.8 2 1 0 2 2 2 2 NB-ARC domain MMR_HSR1 PF01926.23 ORF133330 - 5.8e-07 29.6 1.9 0.012 15.7 0.0 3.8 3 1 1 4 4 3 2 50S ribosome-binding GTPase AAA_14 PF13173.6 ORF133330 - 8.5e-07 29.1 5.2 0.003 17.6 0.3 3.9 3 1 0 5 5 4 2 AAA domain AAA_28 PF13521.6 ORF133330 - 1.2e-06 28.9 0.0 0.054 13.7 0.0 2.9 2 1 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 ORF133330 - 1.5e-06 28.2 0.1 0.073 13.0 0.0 3.1 2 0 0 2 2 2 2 RsgA GTPase AAA_24 PF13479.6 ORF133330 - 1.7e-06 27.9 0.5 0.046 13.4 0.0 3.3 3 1 0 3 3 3 2 AAA domain AAA PF00004.29 ORF133330 - 1.9e-06 28.3 0.7 0.025 15.0 0.0 4.0 3 2 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF133330 - 2e-06 28.1 1.8 0.018 15.3 0.1 3.3 3 1 0 3 3 2 2 AAA domain AAA_29 PF13555.6 ORF133330 - 2.8e-06 27.0 0.3 0.019 14.7 0.0 3.4 3 0 0 3 3 3 2 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF133330 - 1.1e-05 25.9 0.0 0.19 12.1 0.0 2.6 2 0 0 2 2 2 2 AAA ATPase domain AAA_33 PF13671.6 ORF133330 - 4.3e-05 23.7 0.0 0.057 13.6 0.0 3.2 3 0 0 3 3 3 1 AAA domain cobW PF02492.19 ORF133330 - 9.9e-05 22.0 0.1 0.11 12.1 0.1 2.9 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 ORF133330 - 0.00015 21.9 0.0 0.92 9.7 0.0 2.8 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase MobB PF03205.14 ORF133330 - 0.00023 21.1 0.3 0.091 12.7 0.0 3.0 3 0 0 3 3 2 1 Molybdopterin guanine dinucleotide synthesis protein B ZnuA PF01297.17 ORF133330 - 0.00031 20.2 2.3 0.00055 19.4 0.3 2.1 2 0 0 2 2 2 1 Zinc-uptake complex component A periplasmic NTPase_1 PF03266.15 ORF133330 - 0.00034 20.5 0.4 0.66 9.9 0.1 3.1 2 0 0 2 2 2 1 NTPase PduV-EutP PF10662.9 ORF133330 - 0.00042 20.1 0.1 1.3 8.7 0.0 3.1 3 0 0 3 3 2 2 Ethanolamine utilisation - propanediol utilisation AAA_18 PF13238.6 ORF133330 - 0.00055 20.5 3.6 0.3 11.6 0.0 4.0 4 0 0 4 4 4 1 AAA domain AAA_25 PF13481.6 ORF133330 - 0.00073 19.2 0.0 2.5 7.6 0.0 3.3 3 0 0 3 3 3 2 AAA domain SRP54 PF00448.22 ORF133330 - 0.0011 18.6 0.1 0.87 9.2 0.0 2.7 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Septin PF00735.18 ORF133330 - 0.0017 17.7 0.1 1.9 7.7 0.0 2.9 2 0 0 2 2 2 1 Septin RNA_helicase PF00910.22 ORF133330 - 0.0018 18.6 2.0 2.2 8.7 0.0 3.5 4 0 0 4 4 3 1 RNA helicase Pox_A32 PF04665.12 ORF133330 - 0.0019 17.7 1.0 1.3 8.4 0.0 2.7 3 0 0 3 3 2 2 Poxvirus A32 protein AAA_30 PF13604.6 ORF133330 - 0.0022 17.7 0.0 0.24 11.1 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 ORF133330 - 0.0022 17.7 26.2 0.029 14.1 11.6 3.8 3 1 1 4 4 4 2 AAA ATPase domain TsaE PF02367.17 ORF133330 - 0.0022 18.0 0.7 0.52 10.3 0.0 2.6 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 ORF133330 - 0.0028 17.6 11.7 0.27 11.1 0.4 4.0 4 0 0 4 4 4 2 ATPase domain predominantly from Archaea Arf PF00025.21 ORF133330 - 0.0032 17.0 0.1 0.31 10.5 0.0 2.8 2 0 0 2 2 2 1 ADP-ribosylation factor family AAA_19 PF13245.6 ORF133330 - 0.0055 17.0 1.3 0.26 11.6 0.0 3.1 2 1 1 3 3 3 1 AAA domain AAA_23 PF13476.6 ORF133330 - 0.0059 17.1 0.0 0.0059 17.1 0.0 5.0 4 1 0 4 4 3 2 AAA domain Dynamin_N PF00350.23 ORF133330 - 0.0077 16.3 7.5 1.6 8.7 0.0 4.0 3 1 1 4 4 4 2 Dynamin family AAA_7 PF12775.7 ORF133330 - 0.0086 15.6 0.0 1.8 8.0 0.0 2.6 2 0 0 2 2 2 1 P-loop containing dynein motor region T2SSE PF00437.20 ORF133330 - 0.027 13.5 0.2 0.35 9.9 0.1 2.4 2 1 0 2 2 2 0 Type II/IV secretion system protein FeoB_N PF02421.18 ORF133330 - 0.028 14.0 0.1 8.6 5.9 0.0 2.6 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA_5 PF07728.14 ORF133330 - 0.043 13.8 0.0 13 5.8 0.0 3.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Adeno_E4_ORF3 PF06931.11 ORF133330 - 0.051 13.8 0.1 0.14 12.4 0.1 1.7 1 0 0 1 1 1 0 Mastadenovirus E4 ORF3 protein IstB_IS21 PF01695.17 ORF133330 - 0.061 13.1 1.0 12 5.6 0.0 3.4 4 0 0 4 4 3 0 IstB-like ATP binding protein ATP-synt_ab PF00006.25 ORF133330 - 0.062 12.9 0.0 2.8 7.5 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_17 PF13207.6 ORF133330 - 0.18 12.2 7.6 2.7 8.4 0.1 4.5 5 0 0 5 5 3 0 AAA domain DUF87 PF01935.17 ORF133330 - 0.19 11.8 0.0 0.19 11.8 0.0 3.8 2 1 1 3 3 3 0 Helicase HerA, central domain AAA_27 PF13514.6 ORF133330 - 0.26 10.9 2.4 1.1 8.8 0.0 2.9 3 1 1 4 4 3 0 AAA domain SRPRB PF09439.10 ORF133330 - 0.45 9.9 5.1 6.1 6.2 0.0 4.1 4 0 0 4 4 4 0 Signal recognition particle receptor beta subunit DUF1195 PF06708.11 ORF10109 - 0.0066 16.2 0.0 0.016 15.0 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1195) ERGIC_N PF13850.6 ORF10109 - 0.02 15.2 0.6 0.081 13.3 0.1 2.2 2 0 0 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) Ribosomal_L30 PF00327.20 ORF10109 - 0.11 12.4 0.0 0.36 10.7 0.0 1.8 1 0 0 1 1 1 0 Ribosomal protein L30p/L7e Aquarius_N PF16399.5 ORF75300 - 5.7e-32 110.7 0.0 9.6e-32 109.9 0.0 1.4 1 0 0 1 1 1 1 Intron-binding protein aquarius N-terminus AAA_11 PF13086.6 ORF75300 - 6.1e-26 91.8 0.0 3.7e-25 89.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_12 PF13087.6 ORF75300 - 4.3e-20 72.2 0.0 7.1e-18 64.9 0.0 2.5 1 1 0 2 2 2 1 AAA domain AAA_19 PF13245.6 ORF75300 - 2.3e-09 37.7 0.0 3.6e-08 33.9 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 ORF75300 - 1.2e-08 34.9 0.0 0.00024 20.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain ResIII PF04851.15 ORF75300 - 0.00039 20.5 0.0 0.00076 19.5 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit UvrD_C_2 PF13538.6 ORF75300 - 0.0023 17.7 0.1 0.0049 16.7 0.1 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_22 PF13401.6 ORF75300 - 0.0038 17.5 0.1 0.056 13.7 0.0 2.8 2 1 1 3 3 3 1 AAA domain AAA PF00004.29 ORF75300 - 0.005 17.3 0.0 0.02 15.3 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) UvrD-helicase PF00580.21 ORF75300 - 0.062 12.8 0.0 0.11 12.0 0.0 1.7 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain AAA_16 PF13191.6 ORF75300 - 0.067 13.6 0.0 0.25 11.7 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain PhoH PF02562.16 ORF75300 - 0.083 12.3 0.0 0.15 11.4 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_5 PF07728.14 ORF75300 - 0.1 12.6 0.0 0.84 9.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DEAD PF00270.29 ORF75300 - 0.17 11.6 0.0 0.39 10.5 0.0 1.6 2 0 0 2 2 2 0 DEAD/DEAH box helicase NRDD PF13597.6 ORF44795 - 4e-184 613.5 0.0 5e-184 613.2 0.0 1.1 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Gly_radical PF01228.21 ORF44795 - 2.2e-27 95.7 0.0 7.6e-27 93.9 0.0 2.0 1 0 0 1 1 1 1 Glycine radical ATP-cone PF03477.16 ORF44795 - 4e-21 75.4 1.6 5.1e-20 71.8 1.0 2.4 2 0 0 2 2 2 1 ATP cone domain OrfB_Zn_ribbon PF07282.11 ORF44795 - 0.13 12.2 1.5 0.41 10.6 1.5 1.9 1 0 0 1 1 1 0 Putative transposase DNA-binding domain NOB1_Zn_bind PF08772.11 ORF44795 - 0.36 11.0 3.2 0.84 9.8 3.2 1.6 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Anti-TRAP PF15777.5 ORF44795 - 0.59 10.1 2.8 1.4 9.0 2.8 1.5 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein HypA PF01155.19 ORF44795 - 1.3 9.0 3.7 1.9 8.6 1.9 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1595 PF12760.7 ORF44795 - 1.7 8.7 5.3 1.2 9.2 2.4 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Anoctamin PF04547.12 ORF13001 - 0.0071 15.2 0.0 0.016 14.1 0.0 1.5 1 1 0 1 1 1 1 Calcium-activated chloride channel zf-B_box PF00643.24 ORF13001 - 0.016 15.3 5.0 0.016 15.3 5.0 2.7 3 0 0 3 3 3 0 B-box zinc finger Syndecan PF01034.20 ORF13001 - 3.4 7.6 6.8 1 9.3 0.3 3.1 3 0 0 3 3 3 0 Syndecan domain HATPase_c PF02518.26 ORF92066 - 3.8e-27 95.0 0.6 1.3e-26 93.3 0.0 2.2 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 ORF92066 - 4e-25 88.2 0.2 1.2e-24 86.6 0.0 2.0 2 0 0 2 2 2 1 Response regulator receiver domain HATPase_c_3 PF13589.6 ORF92066 - 2.3e-05 24.2 0.0 5.3e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KdpC PF02669.15 ORF92066 - 0.0029 17.5 0.5 0.018 14.9 0.0 2.1 2 0 0 2 2 2 1 K+-transporting ATPase, c chain HATPase_c_5 PF14501.6 ORF92066 - 0.022 14.7 0.0 0.07 13.0 0.0 1.8 1 0 0 1 1 1 0 GHKL domain AMP-binding PF00501.28 ORF44671 - 8.7e-79 265.1 0.0 1.1e-78 264.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Clr5 PF14420.6 ORF44671 - 0.13 12.5 0.3 0.41 10.9 0.3 1.9 1 0 0 1 1 1 0 Clr5 domain DHC_N1 PF08385.12 ORF112984 - 3.7e-22 78.7 20.5 5.4e-21 74.9 20.0 2.3 1 1 0 1 1 1 1 Dynein heavy chain, N-terminal region 1 HH_signal PF01085.18 ORF112984 - 0.82 9.3 5.3 0.23 11.1 1.6 2.0 2 0 0 2 2 2 0 Hedgehog amino-terminal signalling domain Cnd1 PF12717.7 ORF112984 - 3.6 7.6 6.7 5.3 7.1 0.1 3.3 3 0 0 3 3 3 0 non-SMC mitotic condensation complex subunit 1 Pkinase PF00069.25 ORF76133 - 3.9e-67 226.4 0.4 9.6e-67 225.1 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF76133 - 1.3e-48 165.5 0.0 2.2e-48 164.8 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Peptidase_M14 PF00246.24 ORF118712 - 1.3e-23 84.2 2.1 2.2e-23 83.5 2.1 1.3 1 0 0 1 1 1 1 Zinc carboxypeptidase AAA_11 PF13086.6 ORF32836 - 9.2e-21 74.8 0.4 1.3e-18 67.8 0.4 2.3 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 ORF32836 - 8.5e-09 35.9 0.0 5.9e-08 33.2 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 ORF32836 - 5.9e-08 32.7 0.5 1.8e-06 27.8 0.0 3.1 3 0 0 3 3 3 1 AAA domain UvrD-helicase PF00580.21 ORF32836 - 5.4e-05 22.9 0.1 0.00011 21.9 0.1 1.8 1 1 0 1 1 1 1 UvrD/REP helicase N-terminal domain DUF2075 PF09848.9 ORF32836 - 0.00019 20.8 0.0 0.00048 19.5 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 ORF32836 - 0.00023 21.2 0.0 0.00069 19.7 0.0 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 ORF32836 - 0.00034 20.4 0.1 0.0012 18.7 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase AAA_22 PF13401.6 ORF32836 - 0.00097 19.4 0.1 0.051 13.8 0.0 2.6 2 0 0 2 2 2 1 AAA domain NHL PF01436.21 ORF32836 - 0.006 16.6 1.0 0.13 12.4 0.0 3.1 3 0 0 3 3 3 1 NHL repeat AAA PF00004.29 ORF32836 - 0.017 15.5 0.0 0.27 11.7 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 ORF32836 - 0.026 14.1 0.4 0.29 10.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 ORF32836 - 0.042 13.3 0.0 0.099 12.1 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_16 PF13191.6 ORF32836 - 0.049 14.0 0.0 0.15 12.4 0.0 1.9 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 ORF32836 - 0.15 12.0 0.0 0.69 9.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 ORF26995 - 7.7e-54 182.4 1.1 6.9e-52 176.0 0.0 3.0 3 0 0 3 3 3 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF26995 - 3.9e-32 110.3 3.6 3.9e-32 110.3 3.6 2.0 1 1 1 2 2 2 1 AAA lid domain AAA PF00004.29 ORF26995 - 5.1e-24 85.2 1.0 1.6e-13 51.2 0.0 3.4 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 ORF26995 - 2e-20 72.6 0.2 2.4e-19 69.2 0.0 2.8 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 ORF26995 - 4.6e-16 59.1 0.0 4e-10 39.8 0.0 3.4 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 ORF26995 - 7.9e-09 36.1 4.0 0.00015 22.2 0.2 4.1 3 2 0 3 3 3 2 AAA ATPase domain IstB_IS21 PF01695.17 ORF26995 - 3.5e-08 33.4 0.0 0.0029 17.3 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein TniB PF05621.11 ORF26995 - 4.5e-08 32.7 0.0 0.00079 18.9 0.0 4.5 3 1 0 3 3 3 1 Bacterial TniB protein Sigma54_activat PF00158.26 ORF26995 - 1.2e-07 31.6 0.0 0.00027 20.7 0.0 2.6 2 1 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 ORF26995 - 3.4e-07 30.6 10.6 0.015 15.5 0.2 5.7 5 2 0 5 5 4 2 AAA domain AAA_18 PF13238.6 ORF26995 - 8.7e-07 29.6 0.5 0.021 15.3 0.0 3.6 4 0 0 4 4 3 2 AAA domain AAA_14 PF13173.6 ORF26995 - 2.4e-06 27.6 1.2 0.051 13.6 0.0 3.3 4 1 0 4 4 3 2 AAA domain ATPase_2 PF01637.18 ORF26995 - 2.6e-06 27.5 0.1 0.18 11.7 0.0 4.2 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea UVR PF02151.19 ORF26995 - 2.7e-06 26.9 3.1 1e-05 25.1 3.1 2.1 1 0 0 1 1 1 1 UvrB/uvrC motif RNA_helicase PF00910.22 ORF26995 - 5.4e-06 26.7 0.1 0.066 13.6 0.0 3.5 3 1 0 3 3 2 2 RNA helicase AAA_33 PF13671.6 ORF26995 - 3.6e-05 24.0 0.0 0.17 12.0 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 ORF26995 - 0.00013 21.5 0.0 0.4 10.2 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region RsgA_GTPase PF03193.16 ORF26995 - 0.00018 21.5 0.0 0.55 10.1 0.0 3.3 2 1 1 3 3 3 1 RsgA GTPase Zeta_toxin PF06414.12 ORF26995 - 0.0002 20.7 0.0 0.15 11.3 0.0 2.9 2 0 0 2 2 2 1 Zeta toxin AAA_24 PF13479.6 ORF26995 - 0.00024 20.9 0.0 1.3 8.7 0.0 3.4 2 1 0 2 2 2 2 AAA domain ResIII PF04851.15 ORF26995 - 0.00028 21.0 1.6 0.25 11.4 0.0 4.1 4 0 0 4 4 4 1 Type III restriction enzyme, res subunit Roc PF08477.13 ORF26995 - 0.00045 20.4 0.0 1.4 9.1 0.0 2.9 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase TsaE PF02367.17 ORF26995 - 0.00047 20.1 0.0 1.4 9.0 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 ORF26995 - 0.00049 20.0 0.1 0.075 13.0 0.2 3.1 2 1 0 2 2 2 1 NACHT domain RuvB_N PF05496.12 ORF26995 - 0.00051 19.8 3.0 1.9 8.2 0.0 3.7 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 ORF26995 - 0.00068 19.1 0.6 0.71 9.2 0.0 3.3 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 ORF26995 - 0.0018 18.6 0.9 1.8 8.8 0.0 3.4 4 0 0 4 4 3 1 AAA domain DUF815 PF05673.13 ORF26995 - 0.0018 17.5 0.1 1.3 8.1 0.0 2.8 2 1 0 2 2 2 1 Protein of unknown function (DUF815) AAA_25 PF13481.6 ORF26995 - 0.0034 17.0 0.0 2.3 7.7 0.0 2.8 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 ORF26995 - 0.0039 17.7 1.1 1.2 9.7 0.0 3.2 2 1 0 2 2 2 1 ABC transporter Bac_DnaA PF00308.18 ORF26995 - 0.0085 16.0 0.2 1.6 8.5 0.0 3.0 2 1 0 2 2 2 1 Bacterial dnaA protein TFIIB_C_1 PF18542.1 ORF26995 - 0.014 15.4 0.1 0.09 12.8 0.0 2.4 1 1 1 2 2 2 0 Transcription factor IIB C-terminal module 1 AAA_3 PF07726.11 ORF26995 - 0.021 14.7 1.9 3.1 7.7 0.0 3.3 3 1 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 ORF26995 - 0.049 13.6 3.3 18 5.2 0.0 3.7 4 0 0 4 4 3 0 NTPase SRP54 PF00448.22 ORF26995 - 0.063 12.9 0.0 1.5 8.4 0.0 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain PduV-EutP PF10662.9 ORF26995 - 0.07 12.9 0.0 1.8 8.3 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation LEF-4 PF05098.12 ORF26995 - 0.072 11.9 0.3 0.11 11.3 0.3 1.2 1 0 0 1 1 1 0 Late expression factor 4 (LEF-4) AAA_23 PF13476.6 ORF26995 - 0.086 13.3 0.1 0.086 13.3 0.1 3.6 2 2 0 2 2 2 0 AAA domain AAA_17 PF13207.6 ORF26995 - 0.18 12.2 3.8 18 5.8 0.0 3.5 3 1 0 3 3 2 0 AAA domain Focal_AT PF03623.13 ORF26995 - 0.21 11.6 1.8 0.67 10.0 1.8 1.8 1 0 0 1 1 1 0 Focal adhesion targeting region AAA_19 PF13245.6 ORF26995 - 0.49 10.7 2.9 3.1 8.1 0.4 3.2 2 2 0 2 2 2 0 AAA domain ERGIC_N PF13850.6 ORF148105 - 0.018 15.4 0.3 0.071 13.5 0.3 2.1 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4064 PF13273.6 ORF148105 - 0.51 10.6 4.0 1.5 9.1 0.3 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Abhydrolase_3 PF07859.13 ORF141373 - 1.6e-31 109.8 0.0 3.2e-31 108.8 0.0 1.5 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF141373 - 2.8e-07 29.7 0.2 6.7e-07 28.5 0.2 1.7 1 0 0 1 1 1 1 Steryl acetyl hydrolase ERGIC_N PF13850.6 ORF138955 - 0.017 15.5 0.3 0.071 13.5 0.3 2.2 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4064 PF13273.6 ORF138955 - 0.51 10.6 4.0 1.5 9.1 0.3 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Not1 PF04054.15 ORF60996 - 5.2e-57 193.4 2.0 9.2e-57 192.6 2.0 1.3 1 0 0 1 1 1 1 CCR4-Not complex component, Not1 Snapin_Pallidin PF14712.6 ORF44664 - 0.16 12.4 0.5 0.57 10.6 0.5 1.9 1 0 0 1 1 1 0 Snapin/Pallidin Snapin_Pallidin PF14712.6 ORF147117 - 0.16 12.4 0.5 0.57 10.6 0.5 1.9 1 0 0 1 1 1 0 Snapin/Pallidin Not1 PF04054.15 ORF142243 - 5.2e-57 193.4 2.0 9.2e-57 192.6 2.0 1.3 1 0 0 1 1 1 1 CCR4-Not complex component, Not1 Alpha-amylase_C PF02806.18 ORF83996 - 1.4e-18 67.1 0.2 4.6e-18 65.5 0.2 1.9 1 0 0 1 1 1 1 Alpha amylase, C-terminal all-beta domain CBM_48 PF02922.18 ORF83996 - 4.9e-14 52.4 0.2 1.5e-13 50.8 0.2 2.0 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 ORF83996 - 3.1e-11 43.4 5.5 3.3e-09 36.8 1.9 2.5 1 1 1 2 2 2 2 Alpha amylase, catalytic domain AMPK1_CBM PF16561.5 ORF83996 - 0.0025 18.0 0.9 0.015 15.5 0.4 2.6 2 1 0 2 2 2 1 Glycogen recognition site of AMP-activated protein kinase DUF4309 PF14172.6 ORF83996 - 0.026 14.5 0.4 0.13 12.3 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4309) Ion_trans PF00520.31 ORF63790 - 3.1e-14 52.8 11.0 3.1e-14 52.8 11.0 2.5 2 0 0 2 2 2 1 Ion transport protein RIH_assoc PF08454.11 ORF63790 - 1.1e-07 31.7 0.3 1.1e-07 31.7 0.3 2.4 3 0 0 3 3 3 1 RyR and IP3R Homology associated Herpes_capsid PF06112.11 ORF63790 - 0.22 11.6 0.0 0.37 10.8 0.0 1.3 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein DUF2976 PF11190.8 ORF63790 - 1.3 8.8 6.5 0.79 9.6 0.8 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2976) RINGv PF12906.7 ORF81996 - 1.1e-13 51.0 6.2 2.5e-13 49.9 6.2 1.7 1 0 0 1 1 1 1 RING-variant domain FHA PF00498.26 ORF81996 - 7.1e-08 32.7 0.0 1.2e-05 25.6 0.0 3.3 3 0 0 3 3 3 1 FHA domain Yop-YscD_cpl PF16697.5 ORF81996 - 0.0026 18.0 0.0 0.034 14.4 0.0 2.5 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 ORF81996 - 0.091 13.0 5.3 0.2 11.9 5.3 1.6 1 0 0 1 1 1 0 FANCL C-terminal domain zf-AD PF07776.15 ORF81996 - 0.19 12.0 2.8 0.86 9.9 2.8 2.3 1 0 0 1 1 1 0 Zinc-finger associated domain (zf-AD) zf-RING_2 PF13639.6 ORF81996 - 0.19 12.1 5.5 0.74 10.2 5.7 2.0 1 1 0 1 1 1 0 Ring finger domain VPS13_C PF16909.5 ORF37039 - 2.1e-47 161.2 9.2 2.1e-42 144.9 1.2 2.4 2 0 0 2 2 2 2 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 ORF37039 - 2.3e-11 43.9 0.0 5.2e-11 42.7 0.0 1.6 1 0 0 1 1 1 1 Autophagy-related protein C terminal domain UCH PF00443.29 ORF32037 - 1.7e-43 149.0 0.0 2.2e-43 148.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UBA PF00627.31 ORF32037 - 5.5e-12 45.3 0.1 1.6e-09 37.5 0.0 2.6 2 0 0 2 2 2 2 UBA/TS-N domain UCH_1 PF13423.6 ORF32037 - 4.9e-09 36.2 0.0 1.1e-05 25.2 0.0 3.0 1 1 0 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 ORF32037 - 3.1e-08 33.8 0.0 8.4e-07 29.2 0.0 2.4 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein EF-hand_1 PF00036.32 ORF17552 - 3.1e-18 63.9 4.4 5.7e-05 22.4 0.0 5.4 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF17552 - 3.8e-17 60.7 0.8 0.0068 16.3 0.0 5.7 5 0 0 5 5 5 4 EF-hand domain EF-hand_7 PF13499.6 ORF17552 - 4.7e-13 49.4 10.6 2.4e-07 31.1 0.8 4.4 3 1 2 5 5 5 3 EF-hand domain pair EF-hand_8 PF13833.6 ORF17552 - 2.2e-11 43.4 8.1 6.2e-05 22.8 0.0 4.9 5 1 1 6 6 6 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF17552 - 2.8e-08 32.9 7.5 0.0066 15.9 0.0 5.0 5 0 0 5 5 5 3 EF hand SPARC_Ca_bdg PF10591.9 ORF17552 - 0.0077 16.5 8.0 0.24 11.8 0.2 3.6 4 0 0 4 4 4 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF17552 - 0.038 13.9 0.4 1.6 8.7 0.0 3.0 2 1 0 2 2 2 0 Cytoskeletal-regulatory complex EF hand EF-hand_9 PF14658.6 ORF17552 - 0.04 14.2 0.7 8.9 6.7 0.0 3.8 4 0 0 4 4 4 0 EF-hand domain AflR PF08493.10 ORF17552 - 1.1 8.6 3.1 1.5 8.2 0.9 2.0 2 0 0 2 2 2 0 Aflatoxin regulatory protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks8.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks8.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks8.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks8.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:29:23 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Carb_anhydrase PF00194.21 ORF50698 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Cytochrome_CBB3 PF13442.6 ORF5065 - 1.3e-15 57.5 0.1 2.7e-15 56.4 0.1 1.6 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF5065 - 1.2e-06 29.6 0.6 1.2e-05 26.4 0.6 2.2 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF5065 - 0.00018 21.2 0.3 0.00061 19.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain NOT2_3_5 PF04153.18 ORF5028 - 2.8e-19 69.5 1.4 4.9e-19 68.7 1.4 1.3 1 0 0 1 1 1 1 NOT2 / NOT3 / NOT5 family Exonuc_VII_L PF02601.15 ORF48340 - 0.24 10.9 5.1 0.29 10.7 5.1 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit YtxH PF12732.7 ORF48340 - 3.5 8.2 7.6 5e+02 1.3 7.6 3.0 1 1 0 1 1 1 0 YtxH-like protein FtsX_ECD PF18075.1 ORF48340 - 5.9 7.6 10.5 1.5 9.5 4.4 2.9 1 1 2 3 3 3 0 FtsX extracellular domain Hexapep PF00132.24 ORF48016 - 2.9e-09 36.3 8.9 0.00075 19.1 1.4 5.1 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF48016 - 0.0056 16.4 11.0 0.065 13.0 2.2 3.1 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF48016 - 0.017 14.1 1.6 0.1 11.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase PAS_6 PF08348.11 ORF46983 - 2e-36 124.3 0.1 3.8e-36 123.4 0.1 1.4 1 0 0 1 1 1 1 YheO-like PAS domain HTH_22 PF13309.6 ORF46983 - 2e-19 69.4 0.3 3.3e-19 68.7 0.3 1.3 1 0 0 1 1 1 1 HTH domain HTH_23 PF13384.6 ORF46983 - 2e-05 24.2 0.0 4.6e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_7 PF02796.15 ORF46983 - 0.00031 20.7 0.1 0.001 19.1 0.0 1.9 2 1 0 2 2 2 1 Helix-turn-helix domain of resolvase DUF658 PF04936.12 ORF46983 - 0.0034 17.2 0.1 0.0056 16.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF658) HTH_17 PF12728.7 ORF46983 - 0.0051 17.0 0.0 0.01 16.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_10 PF04967.12 ORF46983 - 0.022 14.5 0.1 0.055 13.3 0.1 1.6 1 0 0 1 1 1 0 HTH DNA binding domain dCache_1 PF02743.18 ORF46983 - 0.046 13.5 0.1 0.12 12.1 0.0 1.7 2 1 0 2 2 2 0 Cache domain GerE PF00196.19 ORF46983 - 0.08 12.5 0.0 0.17 11.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_29 PF13551.6 ORF46983 - 0.097 12.7 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix Phage_CI_repr PF07022.13 ORF46983 - 0.1 12.7 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain DUF3791 PF12668.7 ORF46983 - 0.12 12.4 0.1 0.37 10.9 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3791) MerR PF00376.23 ORF46983 - 0.15 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 MerR family regulatory protein zf-RING_10 PF16685.5 ORF4663 - 0.65 10.2 3.6 1.4 9.1 0.1 2.5 2 0 0 2 2 2 0 zinc RING finger of MSL2 Kringle PF00051.18 ORF4520 - 0.15 12.4 0.8 0.26 11.6 0.1 1.7 2 0 0 2 2 2 0 Kringle domain 14-3-3 PF00244.20 ORF42525 - 3.8e-77 258.8 11.3 4.3e-77 258.6 11.3 1.0 1 0 0 1 1 1 1 14-3-3 protein PUB PF09409.10 ORF41066 - 2.5e-15 56.2 0.0 3.7e-15 55.6 0.0 1.3 1 0 0 1 1 1 1 PUB domain Tim29 PF10171.9 ORF41066 - 0.0013 18.3 1.5 0.0052 16.3 1.1 1.9 2 0 0 2 2 2 1 Translocase of the Inner Mitochondrial membrane 29 STI1 PF17830.1 ORF41066 - 0.16 11.9 28.7 3.2 7.8 25.8 3.4 2 1 0 2 2 2 0 STI1 domain GerD PF17898.1 ORF41066 - 3.3 7.7 20.9 0.82 9.6 14.1 2.6 3 0 0 3 3 3 0 Spore germination GerD central core domain Bep_C_terminal PF17841.1 ORF41066 - 8.8 6.6 7.3 3.4 8.0 1.6 2.5 3 0 0 3 3 3 0 BID domain of Bartonella effector protein (Bep) HhH-GPD PF00730.25 ORF39886 - 1.8e-12 47.6 0.0 3.6e-12 46.7 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein OGG_N PF07934.12 ORF39886 - 3.4e-12 46.5 0.2 9.6e-12 45.1 0.0 1.7 2 0 0 2 2 2 1 8-oxoguanine DNA glycosylase, N-terminal domain HHH_2 PF12826.7 ORF39886 - 0.0025 17.9 0.0 1.3 9.1 0.0 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH PF00633.23 ORF39886 - 0.0049 16.7 0.0 0.014 15.3 0.0 1.8 2 0 0 2 2 2 1 Helix-hairpin-helix motif Ribosomal_L30 PF00327.20 ORF34105 - 4.6e-18 64.8 3.4 8.7e-18 64.0 3.4 1.5 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L30_N PF08079.12 ORF34105 - 1.7e-12 47.4 19.5 3.7e-12 46.3 19.5 1.6 1 0 0 1 1 1 1 Ribosomal L30 N-terminal domain Ribosomal_S30 PF04758.14 ORF34105 - 1.7 8.9 8.3 5.6 7.2 8.3 2.0 1 1 0 1 1 1 0 Ribosomal protein S30 PTEN_C2 PF10409.9 ORF32604 - 3.4e-06 26.8 1.6 6e-06 26.0 1.6 1.4 1 0 0 1 1 1 1 C2 domain of PTEN tumour-suppressor protein Pup PF05639.11 ORF32604 - 1.4 9.9 0.1 1.4 9.9 0.1 4.1 2 2 1 3 3 3 0 Pup-like protein Glucosamine_iso PF01182.20 ORF32214 - 1.3e-16 61.2 0.0 3.3e-16 59.8 0.0 1.6 1 1 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AFP_2 PF18815.1 ORF31414 - 0.09 13.0 0.3 0.51 10.6 0.0 2.2 2 0 0 2 2 2 0 Bacterial antifreeze protein repeat DUF155 PF02582.14 ORF30461 - 3.8e-22 79.2 0.0 4.5e-22 79.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YagE family COG1723 EF_TS PF00889.19 ORF28017 - 3.4e-15 56.2 0.0 5e-15 55.7 0.0 1.2 1 0 0 1 1 1 1 Elongation factor TS Carb_anhydrase PF00194.21 ORF26434 - 7.5e-33 114.1 0.0 1.2e-32 113.5 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Rubella_Capsid PF05750.11 ORF26265 - 0.17 11.5 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 Rubella capsid protein LRAT PF04970.13 ORF24006 - 7.2e-05 23.1 0.0 0.0001 22.6 0.0 1.2 1 0 0 1 1 1 1 Lecithin retinol acyltransferase Peptidase_C97 PF05903.14 ORF24006 - 0.0093 15.8 0.0 0.017 15.0 0.0 1.4 1 0 0 1 1 1 1 PPPDE putative peptidase domain DUF1388 PF07142.12 ORF2078 - 0.035 14.1 3.5 0.087 12.8 0.5 2.6 2 0 0 2 2 2 0 Repeat of unknown function (DUF1388) Mg_trans_NIPA PF05653.14 ORF19938 - 1.3e-05 24.5 2.5 2.2e-05 23.7 2.5 1.3 1 0 0 1 1 1 1 Magnesium transporter NIPA FKBP26_C PF18046.1 ORF19938 - 0.27 11.4 1.9 2.8 8.1 0.2 2.2 2 0 0 2 2 2 0 FKBP26_C-terminal ELO PF01151.18 ORF19845 - 0.032 13.8 4.7 0.095 12.2 0.0 2.2 2 0 0 2 2 2 0 GNS1/SUR4 family DUF2951 PF11166.8 ORF19845 - 0.032 14.4 0.5 0.37 11.0 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) DUF948 PF06103.11 ORF19845 - 0.097 12.9 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) SurA_N_3 PF13624.6 ORF19845 - 0.13 12.1 0.1 0.13 12.1 0.1 2.0 2 0 0 2 2 2 0 SurA N-terminal domain DUF5463 PF17551.2 ORF17168 - 2.9 7.9 4.8 0.75 9.8 0.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5463) ART PF01129.18 ORF16404 - 0.0034 16.7 0.0 0.0052 16.1 0.0 1.4 1 0 0 1 1 1 1 NAD:arginine ADP-ribosyltransferase FAA_hydrolase PF01557.18 ORF153021 - 1.3e-41 142.7 0.0 1.6e-41 142.4 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family STAT1_TAZ2bind PF12162.8 ORF153021 - 0.24 11.0 0.7 0.51 10.0 0.1 1.9 2 0 0 2 2 2 0 STAT1 TAZ2 binding domain Cytochrome_CBB3 PF13442.6 ORF150938 - 1.3e-15 57.5 0.1 2.7e-15 56.4 0.1 1.6 1 0 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 ORF150938 - 1.2e-06 29.6 0.6 1.2e-05 26.4 0.6 2.2 1 1 0 1 1 1 1 Cytochrome c Cytochrom_C550 PF14495.6 ORF150938 - 0.00018 21.2 0.3 0.00061 19.5 0.2 1.8 1 1 1 2 2 2 1 Cytochrome c-550 domain Rnk_N PF14760.6 ORF150597 - 0.065 13.7 0.9 0.15 12.6 0.9 1.6 1 0 0 1 1 1 0 Rnk N-terminus Carb_anhydrase PF00194.21 ORF147255 - 7.4e-34 117.4 0.0 1.2e-33 116.8 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Arf PF00025.21 ORF144414 - 4.5e-78 260.7 0.2 5.5e-78 260.4 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF144414 - 4.4e-14 52.7 0.0 7.1e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 ORF144414 - 3.4e-13 49.4 0.0 4.5e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 ORF144414 - 7.8e-13 48.3 0.0 1.1e-12 47.9 0.0 1.2 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 ORF144414 - 2.1e-11 43.6 0.3 1.8e-07 30.6 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF144414 - 6.9e-10 38.7 0.0 9.8e-10 38.2 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF144414 - 2.9e-05 24.1 0.0 4.8e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 ORF144414 - 0.018 14.4 0.1 0.032 13.5 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase AAA_33 PF13671.6 ORF144414 - 0.037 14.2 0.0 0.066 13.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Carb_anhydrase PF00194.21 ORF140312 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Glucosamine_iso PF01182.20 ORF140180 - 1.3e-16 61.2 0.0 3.3e-16 59.8 0.0 1.6 1 1 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GatB_N PF02934.15 ORF137364 - 0.054 12.9 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 GatB/GatE catalytic domain Methyltransf_11 PF08241.12 ORF136955 - 5.2e-15 55.9 0.0 9e-15 55.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF136955 - 1.4e-13 50.9 0.4 1.8e-13 50.6 0.4 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF136955 - 4.5e-13 49.7 0.0 9.5e-13 48.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF136955 - 5.9e-08 33.4 0.4 1.3e-07 32.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF136955 - 5.4e-07 29.2 0.0 7.7e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 ORF136955 - 1.7e-05 24.8 0.2 0.0003 20.7 0.2 2.1 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_23 PF13489.6 ORF136955 - 4.2e-05 23.4 0.0 0.00015 21.6 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 ORF136955 - 0.0004 20.1 0.1 0.00099 18.8 0.1 1.8 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_29 PF03141.16 ORF136955 - 0.00081 18.1 0.2 0.0012 17.5 0.2 1.4 1 1 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase TehB PF03848.14 ORF136955 - 0.00091 18.7 0.5 0.0056 16.1 0.0 2.0 2 0 0 2 2 2 1 Tellurite resistance protein TehB NodS PF05401.11 ORF136955 - 0.0021 17.7 0.0 0.0028 17.3 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) N6_N4_Mtase PF01555.18 ORF136955 - 0.011 15.5 2.8 0.027 14.2 0.2 2.0 2 0 0 2 2 2 0 DNA methylase EF-1_beta_acid PF10587.9 ORF136955 - 0.038 14.4 3.2 0.038 14.4 3.2 2.3 2 0 0 2 2 2 0 Eukaryotic elongation factor 1 beta central acidic region TRM13 PF05206.14 ORF136955 - 0.049 13.2 0.0 0.049 13.2 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase TRM13 MetW PF07021.12 ORF136955 - 0.057 13.0 0.1 0.11 12.1 0.1 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW DREV PF05219.12 ORF136955 - 0.09 11.9 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase Carb_anhydrase PF00194.21 ORF135593 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase WD40 PF00400.32 ORF134915 - 8.8e-08 32.7 11.3 0.033 15.1 0.2 4.4 4 0 0 4 4 4 4 WD domain, G-beta repeat Hexapep PF00132.24 ORF12650 - 2.9e-09 36.3 8.9 0.00075 19.1 1.4 5.1 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF12650 - 0.0056 16.4 11.0 0.065 13.0 2.2 3.1 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF12650 - 0.017 14.1 1.6 0.1 11.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase DUF5588 PF17826.1 ORF125501 - 0.73 8.7 1.8 1 8.2 1.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5588) MAP65_ASE1 PF03999.12 ORF125501 - 5.4 5.6 6.4 7 5.2 6.4 1.1 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Hexapep PF00132.24 ORF125176 - 2.9e-09 36.3 8.9 0.00075 19.1 1.4 5.1 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF125176 - 0.0056 16.4 11.0 0.065 13.0 2.2 3.1 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF125176 - 0.017 14.1 1.6 0.1 11.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase Carb_anhydrase PF00194.21 ORF124777 - 4.5e-34 118.1 0.0 6.3e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic-type carbonic anhydrase LRR_8 PF13855.6 ORF12108 - 2.4e-07 30.4 11.8 1.6e-05 24.6 2.1 2.9 2 1 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 ORF12108 - 7.1e-06 26.3 20.4 0.00014 22.1 6.0 3.3 2 1 2 4 4 4 3 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF12108 - 0.00011 21.8 5.5 0.0012 18.4 5.5 2.1 1 1 0 1 1 1 1 Leucine-rich repeat LRR_1 PF00560.33 ORF12108 - 0.35 11.6 12.7 1.4e+02 3.7 7.2 4.8 4 1 0 4 4 4 0 Leucine Rich Repeat LRR_6 PF13516.6 ORF12108 - 4.2 7.7 13.0 57 4.1 0.0 4.9 5 0 0 5 5 5 0 Leucine Rich repeat DUF155 PF02582.14 ORF120252 - 1.6e-10 41.4 0.0 2e-10 41.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YagE family COG1723 zf-RING_10 PF16685.5 ORF120055 - 0.65 10.2 3.6 1.4 9.1 0.1 2.5 2 0 0 2 2 2 0 zinc RING finger of MSL2 DUF4549 PF15082.6 ORF119568 - 0.0073 16.1 0.2 0.014 15.1 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4549) Pox_polyA_pol_N PF12630.7 ORF119568 - 2.8 8.4 5.4 3.5 8.0 0.9 2.6 1 1 2 3 3 3 0 Poxvirus poly(A) polymerase N-terminal domain GST_C_6 PF17171.4 ORF118270 - 0.00032 20.4 0.1 0.0017 18.1 0.1 2.3 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain NuiA PF07924.11 ORF118270 - 0.051 14.0 0.6 0.84 10.0 0.0 2.3 2 0 0 2 2 2 0 Nuclease A inhibitor-like protein CRAL_TRIO_2 PF13716.6 ORF118270 - 0.069 13.3 0.5 0.069 13.3 0.5 2.3 3 0 0 3 3 3 0 Divergent CRAL/TRIO domain PAP_assoc PF03828.19 ORF115657 - 1.4e-07 31.6 2.1 6.7e-07 29.4 2.1 2.1 1 1 0 1 1 1 1 Cid1 family poly A polymerase HalOD2 PF18547.1 ORF114826 - 0.49 10.3 5.2 0.34 10.8 0.2 3.0 3 0 0 3 3 3 0 Halobacterial output domain 2 Rpr2 PF04032.16 ORF112632 - 0.056 13.7 0.1 0.056 13.7 0.1 1.9 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Nudix_N_2 PF14803.6 ORF112632 - 0.23 11.4 0.2 0.23 11.4 0.2 2.6 2 0 0 2 2 2 0 Nudix N-terminal 14-3-3 PF00244.20 ORF109833 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF109833 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat VPS9 PF02204.18 ORF109252 - 4.2e-26 91.2 0.0 9e-26 90.1 0.0 1.5 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain IlvC PF01450.19 ORF109252 - 0.014 15.7 0.1 0.031 14.5 0.1 1.6 1 1 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain SLR1-BP PF07333.12 ORF108249 - 1.2 9.7 10.4 0.092 13.2 4.7 2.2 2 1 1 3 3 3 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) 14-3-3 PF00244.20 ORF107933 - 1.2e-97 325.8 8.2 1.4e-97 325.6 8.2 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_14 PF13428.6 ORF107933 - 0.14 13.0 3.4 18 6.5 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_MalT PF17874.1 ORF107764 - 1.3e-35 123.3 6.1 1.3e-35 123.3 6.1 1.7 2 0 0 2 2 2 1 MalT-like TPR region GerE PF00196.19 ORF107764 - 5.7e-21 73.8 0.0 1.1e-20 72.9 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 ORF107764 - 0.00081 19.0 0.0 0.0026 17.4 0.0 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 ORF107764 - 0.0027 17.5 0.1 0.0089 15.8 0.1 2.0 1 0 0 1 1 1 1 Homeodomain-like domain Penicillinase_R PF03965.16 ORF107764 - 0.005 17.2 0.4 0.056 13.8 0.1 2.5 2 1 0 2 2 2 1 Penicillinase repressor Sigma70_r4 PF04545.16 ORF107764 - 0.0074 15.8 0.0 0.025 14.1 0.0 1.9 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_40 PF14493.6 ORF107764 - 0.027 14.9 0.9 0.079 13.4 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain TPR_8 PF13181.6 ORF107764 - 0.03 14.5 1.3 6.1 7.3 0.0 3.4 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 ORF107764 - 0.038 14.1 2.6 11 6.4 0.2 3.9 3 0 0 3 3 3 0 Tetratricopeptide repeat HTH_38 PF13936.6 ORF107764 - 0.043 13.6 0.0 0.13 12.1 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain TPR_19 PF14559.6 ORF107764 - 0.089 13.3 8.3 1.5 9.4 0.1 3.1 3 1 1 4 4 3 0 Tetratricopeptide repeat HTH_24 PF13412.6 ORF107764 - 0.11 12.1 0.6 0.5 10.0 0.0 2.5 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding TPR_14 PF13428.6 ORF107764 - 0.67 10.9 6.3 5.3 8.1 0.2 3.5 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 ORF107764 - 0.85 10.0 6.2 6.9 7.0 0.3 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat Hexapep PF00132.24 ORF105948 - 2.9e-09 36.3 8.9 0.00075 19.1 1.4 5.1 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF105948 - 0.0056 16.4 11.0 0.065 13.0 2.2 3.1 2 1 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 ORF105948 - 0.017 14.1 1.6 0.1 11.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase DUF3139 PF11337.8 ORF105616 - 5.8 7.6 7.8 1.1 9.9 0.8 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF3139) LANC_like PF05147.13 ORF104205 - 1.3e-44 152.2 0.0 1.5e-44 152.1 0.0 1.0 1 0 0 1 1 1 1 Lanthionine synthetase C-like protein C5-epim_C PF06662.13 ORF104205 - 0.0068 15.9 0.1 0.016 14.7 0.0 1.5 2 0 0 2 2 2 1 D-glucuronyl C5-epimerase C-terminus Soyouz_module PF14313.6 ORF104205 - 0.093 12.5 0.0 0.32 10.8 0.0 1.8 1 0 0 1 1 1 0 N-terminal region of Paramyxovirinae phosphoprotein (P) NrfD PF03916.14 ORF103906 - 3e-80 270.2 20.0 3.7e-80 269.9 20.0 1.0 1 0 0 1 1 1 1 Polysulphide reductase, NrfD UPF0181 PF03701.14 ORF103906 - 0.0039 16.8 0.0 0.0069 16.0 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0181) VWA PF00092.28 NODE_30415_length_715_cov_84.498529_g24047_i0forward_frame_1 - 0.00015 22.0 0.2 0.00029 21.1 0.0 1.6 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 NODE_30415_length_715_cov_84.498529_g24047_i0forward_frame_1 - 0.0067 16.4 0.0 0.052 13.5 0.0 2.1 1 1 1 2 2 2 1 von Willebrand factor type A domain DUF2408 PF10303.9 NODE_30415_length_715_cov_84.498529_g24047_i0forward_frame_1 - 0.16 12.5 0.9 0.37 11.4 0.6 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2408) DMPK_coil PF08826.10 NODE_30415_length_715_cov_84.498529_g24047_i0forward_frame_1 - 0.21 11.7 1.7 1.1 9.5 0.0 2.7 3 0 0 3 3 3 0 DMPK coiled coil domain like SKA2 PF16740.5 NODE_30404_length_715_cov_166.042647_g21502_i1forward_frame_1 - 0.085 12.7 0.2 0.12 12.2 0.2 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 PSII_Pbs31 PF18240.1 NODE_30385_length_715_cov_5142.542647_g23304_i1reverse_frame_1 - 1e-07 32.3 0.1 8.8e-07 29.3 0.0 2.3 2 0 0 2 2 2 1 Photosystem II Psb31 protein CytB6-F_Fe-S PF08802.10 NODE_30385_length_715_cov_5142.542647_g23304_i1reverse_frame_1 - 0.36 10.9 4.7 10 6.3 0.9 2.3 1 1 1 2 2 2 0 Cytochrome B6-F complex Fe-S subunit DUF508 PF04370.12 NODE_30381_length_716_cov_19.881057_g24016_i0reverse_frame_1 - 0.18 11.5 6.9 0.33 10.7 6.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF508) 2OG-FeII_Oxy_3 PF13640.6 NODE_30356_length_716_cov_235.963289_g23991_i0reverse_frame_1 - 5.7e-16 59.2 0.3 9.5e-16 58.5 0.3 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Fer4_24 PF18109.1 NODE_30338_length_717_cov_2.491202_g23977_i0reverse_frame_1 - 0.16 12.3 1.9 0.41 10.9 0.2 2.5 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain UNC-93 PF05978.16 NODE_30321_length_717_cov_77.623167_g23960_i0reverse_frame_1 - 0.052 13.3 5.5 0.1 12.3 5.5 1.5 1 0 0 1 1 1 0 Ion channel regulatory protein UNC-93 IL17 PF06083.11 NODE_30291_length_718_cov_8.743777_g23934_i0forward_frame_3 - 0.15 12.5 0.9 0.35 11.4 0.0 2.0 2 1 0 2 2 2 0 Interleukin-17 WDCP PF15390.6 NODE_30291_length_718_cov_8.743777_g23934_i0forward_frame_3 - 0.91 7.8 8.7 1.1 7.5 8.7 1.1 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Presenilin PF01080.17 NODE_30291_length_718_cov_8.743777_g23934_i0forward_frame_3 - 7.8 5.2 6.8 11 4.6 6.8 1.2 1 0 0 1 1 1 0 Presenilin RGS-like PF09128.11 NODE_30289_length_718_cov_62.159590_g23932_i0forward_frame_3 - 8.9 6.0 6.3 5.3 6.7 1.6 2.1 2 0 0 2 2 2 0 Regulator of G protein signalling-like domain PBP1_TM PF14812.6 NODE_30261_length_718_cov_717.884334_g23910_i0forward_frame_3 - 0.028 14.8 1.4 0.054 13.9 0.3 2.0 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF4734 PF15881.5 NODE_30246_length_719_cov_135.359649_g23897_i0reverse_frame_3 - 0.053 13.7 0.8 0.98 9.6 0.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4734) Ribosomal_L33 PF00471.20 NODE_30240_length_719_cov_245.714912_g23893_i0reverse_frame_2 - 1.8 9.0 7.0 0.65 10.5 2.8 2.5 2 1 0 2 2 2 0 Ribosomal protein L33 Internalin_N PF12354.8 NODE_30233_length_719_cov_592.940058_g23887_i0forward_frame_3 - 8.8 6.5 8.1 11 6.2 0.2 3.4 3 0 0 3 3 3 0 Bacterial adhesion/invasion protein N terminal CIA30 PF08547.12 NODE_30228_length_719_cov_5004.698830_g20702_i2forward_frame_3 - 4e-12 46.4 0.0 5.4e-12 46.0 0.0 1.1 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) Molybdopterin PF00384.22 NODE_30223_length_720_cov_2.956204_g23880_i0reverse_frame_3 - 5.6e-44 150.8 0.0 6.7e-44 150.5 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase PRMT5_C PF17286.2 NODE_30211_length_720_cov_96.204380_g23870_i0reverse_frame_3 - 0.042 13.7 0.0 0.077 12.9 0.0 1.4 1 0 0 1 1 1 0 PRMT5 oligomerisation domain Ank_4 PF13637.6 ORF9916 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF9916 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF9916 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF9916 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF9916 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF9916 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain ECH_1 PF00378.20 ORF96846 - 4.8e-23 81.8 0.0 5.3e-23 81.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF96846 - 4.8e-10 39.4 0.0 5.7e-10 39.2 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase DASH_Dad2 PF08654.10 ORF92418 - 0.0021 18.5 0.9 0.0021 18.5 0.9 3.0 2 1 2 4 4 4 1 DASH complex subunit Dad2 DASH_Duo1 PF08651.10 ORF92418 - 0.027 14.2 6.7 0.3 10.9 0.1 3.5 3 1 0 3 3 3 0 DASH complex subunit Duo1 Apolipoprotein PF01442.18 ORF92418 - 0.072 13.0 8.6 0.55 10.1 1.0 2.6 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF92418 - 0.14 12.2 7.5 0.73 9.9 4.1 2.8 2 2 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1451 PF07295.11 ORF92418 - 0.18 11.9 13.8 0.12 12.4 2.0 2.6 1 1 0 2 2 2 0 Zinc-ribbon containing domain Acetyltransf_11 PF13720.6 ORF92418 - 0.93 10.0 4.7 21 5.7 0.5 3.0 2 1 1 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FTO_CTD PF12934.7 ORF92418 - 1.3 8.8 12.9 0.3 10.8 3.1 3.0 2 2 1 3 3 3 0 FTO C-terminal domain DUF883 PF05957.13 ORF92418 - 1.6 9.4 4.6 2 9.1 0.4 2.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) PLA2G12 PF06951.11 ORF92418 - 4.7 7.1 5.7 11 5.8 0.4 2.7 2 2 1 3 3 3 0 Group XII secretory phospholipase A2 precursor (PLA2G12) Tropomyosin_1 PF12718.7 ORF92418 - 8.7 6.5 24.5 4.4 7.5 8.7 2.8 2 1 0 2 2 2 0 Tropomyosin like Far-17a_AIG1 PF04750.14 ORF91975 - 4.9e-06 26.0 15.9 6.5e-06 25.6 15.9 1.2 1 0 0 1 1 1 1 FAR-17a/AIG1-like protein Bap31_Bap29_C PF18035.1 ORF91975 - 0.0076 16.2 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 Bap31/Bap29 cytoplasmic coiled-coil domain zinc_ribbon_9 PF14369.6 ORF90810 - 0.008 16.4 0.3 0.008 16.4 0.3 3.7 3 0 0 3 3 3 2 zinc-ribbon ECH_1 PF00378.20 ORF87033 - 7.7e-23 81.1 0.0 8.6e-23 80.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF87033 - 1.1e-08 35.0 0.0 1.4e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase RQC PF09382.10 ORF8440 - 6.1e-36 122.7 0.0 1e-35 122.0 0.0 1.3 1 0 0 1 1 1 1 RQC domain HRDC PF00570.23 ORF8440 - 1.8e-24 85.5 0.1 8.6e-24 83.3 0.0 2.0 2 0 0 2 2 2 1 HRDC domain RecQ_Zn_bind PF16124.5 ORF8440 - 1.8e-10 41.4 0.9 3.5e-10 40.5 0.9 1.5 1 0 0 1 1 1 1 RecQ zinc-binding Helicase_Sgs1 PF11408.8 ORF8440 - 0.019 15.0 0.1 0.035 14.2 0.1 1.3 1 0 0 1 1 1 0 Sgs1 RecQ helicase zf-CXXC PF02008.20 ORF8440 - 0.043 13.8 0.3 0.096 12.7 0.3 1.5 1 0 0 1 1 1 0 CXXC zinc finger domain DUF5577 PF17740.1 ORF82191 - 0.0043 16.8 1.1 0.0053 16.5 1.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5577) DUF4456 PF14644.6 ORF82191 - 0.016 14.9 0.1 0.029 14.1 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4456) PH_12 PF16457.5 ORF82191 - 1.8 9.1 5.9 0.39 11.2 0.7 2.1 1 1 1 2 2 2 0 Pleckstrin homology domain SAGA-Tad1 PF12767.7 ORF82068 - 0.62 9.8 7.4 14 5.3 5.9 2.2 1 1 0 2 2 2 0 Transcriptional regulator of RNA polII, SAGA, subunit HATPase_c_4 PF13749.6 ORF81914 - 0.041 14.0 0.2 0.82 9.8 0.1 2.2 2 0 0 2 2 2 0 Putative ATP-dependent DNA helicase recG C-terminal ACT_6 PF13740.6 ORF80511 - 2.5e-26 91.4 0.4 7.6e-25 86.7 0.0 2.3 2 1 0 2 2 2 1 ACT domain ACT PF01842.25 ORF80511 - 1.8e-09 37.2 0.1 6.9e-07 28.9 0.0 2.3 2 0 0 2 2 2 2 ACT domain ACT_4 PF13291.6 ORF80511 - 7.3e-06 26.5 0.1 0.13 12.8 0.0 3.0 2 1 1 3 3 3 2 ACT domain ACT_5 PF13710.6 ORF80511 - 0.0034 17.2 0.0 0.013 15.4 0.0 1.9 2 0 0 2 2 2 1 ACT domain MAT1 PF06391.13 ORF79049 - 8.7e-15 55.1 0.4 1.3e-14 54.5 0.4 1.2 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 Vir_act_alpha_C PF10400.9 ORF79049 - 0.019 15.6 0.6 0.019 15.6 0.6 1.6 2 0 0 2 2 2 0 Virulence activator alpha C-term Peptidase_S9 PF00326.21 ORF77718 - 4.6e-27 94.9 0.1 5.6e-27 94.6 0.1 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 ORF77718 - 0.015 14.5 0.1 2.1 7.5 0.0 2.4 1 1 0 2 2 2 0 Serine aminopeptidase, S33 Tim17 PF02466.19 ORF76252 - 0.047 14.1 0.2 0.08 13.3 0.2 1.4 1 1 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family Ank_4 PF13637.6 ORF75270 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF75270 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF75270 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF75270 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF75270 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF75270 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Ubiquitin_2 PF14560.6 ORF73111 - 5.2e-25 87.7 1.7 1.1e-24 86.6 0.1 2.1 2 0 0 2 2 2 1 Ubiquitin-like domain CAP_GLY PF01302.25 ORF73111 - 6.4e-18 64.5 0.0 1e-17 63.9 0.0 1.3 1 0 0 1 1 1 1 CAP-Gly domain ubiquitin PF00240.23 ORF73111 - 0.0024 17.6 0.9 0.22 11.3 0.1 3.4 3 1 0 3 3 3 1 Ubiquitin family T6_Ig_like PF18002.1 ORF73111 - 0.0042 17.0 0.1 0.0063 16.4 0.1 1.3 1 0 0 1 1 1 1 T6 antigen Ig like domain DUF3297 PF11730.8 ORF73111 - 0.037 13.9 0.1 0.09 12.7 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3297) Serum_albumin PF00273.20 ORF70448 - 0.0019 18.0 0.5 0.003 17.4 0.5 1.2 1 0 0 1 1 1 1 Serum albumin family VPS9 PF02204.18 ORF7040 - 6.4e-17 61.7 1.8 6.5e-17 61.6 0.3 1.8 2 0 0 2 2 2 1 Vacuolar sorting protein 9 (VPS9) domain TolA_bind_tri PF16331.5 ORF68713 - 2.2 8.4 7.0 0.23 11.6 2.2 1.9 2 0 0 2 2 2 0 TolA binding protein trimerisation Thioredoxin PF00085.20 ORF67157 - 1.4e-06 28.2 0.0 3.9e-06 26.8 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin DLP_helical PF18709.1 ORF67157 - 0.024 13.9 1.4 0.032 13.5 1.4 1.1 1 0 0 1 1 1 0 Dynamin-like helical domain DUF1054 PF06335.12 ORF67157 - 0.068 13.1 0.8 0.092 12.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Uso1_p115_C PF04871.13 ORF67157 - 0.11 12.9 9.3 0.16 12.3 9.3 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Cep57_CLD_2 PF14197.6 ORF67157 - 0.15 12.1 2.2 0.32 11.1 2.2 1.5 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 OmpH PF03938.14 ORF67157 - 0.49 10.7 6.6 0.8 10.0 6.6 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TMF_DNA_bd PF12329.8 ORF67157 - 4.6 7.3 16.9 34 4.5 12.7 3.0 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DASH_Dad2 PF08654.10 ORF65555 - 0.0021 18.5 0.9 0.0021 18.5 0.9 3.0 2 1 2 4 4 4 1 DASH complex subunit Dad2 DASH_Duo1 PF08651.10 ORF65555 - 0.027 14.2 6.7 0.3 10.9 0.1 3.5 3 1 0 3 3 3 0 DASH complex subunit Duo1 Apolipoprotein PF01442.18 ORF65555 - 0.072 13.0 8.6 0.55 10.1 1.0 2.6 1 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 ORF65555 - 0.14 12.2 7.5 0.73 9.9 4.1 2.8 2 2 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1451 PF07295.11 ORF65555 - 0.18 11.9 13.8 0.12 12.4 2.0 2.6 1 1 0 2 2 2 0 Zinc-ribbon containing domain Acetyltransf_11 PF13720.6 ORF65555 - 0.93 10.0 4.7 21 5.7 0.5 3.0 2 1 1 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FTO_CTD PF12934.7 ORF65555 - 1.3 8.8 12.9 0.3 10.8 3.1 3.0 2 2 1 3 3 3 0 FTO C-terminal domain DUF883 PF05957.13 ORF65555 - 1.6 9.4 4.6 2 9.1 0.4 2.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) PLA2G12 PF06951.11 ORF65555 - 4.7 7.1 5.7 11 5.8 0.4 2.7 2 2 1 3 3 3 0 Group XII secretory phospholipase A2 precursor (PLA2G12) Tropomyosin_1 PF12718.7 ORF65555 - 8.7 6.5 24.5 4.4 7.5 8.7 2.8 2 1 0 2 2 2 0 Tropomyosin like CLAMP PF14769.6 ORF63155 - 2.7e-05 24.5 0.5 7.2e-05 23.2 0.2 1.9 1 1 1 2 2 2 1 Flagellar C1a complex subunit C1a-32 DUF4298 PF14131.6 ORF63155 - 0.59 10.1 3.7 2.3 8.2 0.6 3.1 3 1 0 3 3 3 0 Domain of unknown function (DUF4298) Pou PF00157.17 ORF62565 - 0.057 13.4 0.1 0.17 11.9 0.1 1.8 1 0 0 1 1 1 0 Pou domain - N-terminal to homeobox domain Amj PF10997.8 ORF62565 - 0.16 11.3 0.3 0.22 10.8 0.3 1.1 1 0 0 1 1 1 0 Alternate to MurJ CDC50 PF03381.15 ORF61545 - 3.1e-50 171.3 0.1 3.1e-50 171.3 0.1 1.7 1 1 1 2 2 2 1 LEM3 (ligand-effect modulator 3) family / CDC50 family ribosomal_L24 PF17136.4 ORF60003 - 4.6e-13 49.4 3.9 2.2e-11 44.0 0.7 2.6 2 0 0 2 2 2 2 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 ORF60003 - 0.00062 19.6 0.1 0.0019 18.1 0.0 1.9 2 0 0 2 2 2 1 KOW motif MazG_C PF18722.1 ORF58874 - 0.032 13.7 0.0 0.69 9.4 0.0 2.3 1 1 1 2 2 2 0 MazG C-terminal domain COX3 PF00510.18 ORF5681 - 3.3e-18 66.4 22.7 4.1e-18 66.2 22.7 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III Ank_4 PF13637.6 ORF55697 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF55697 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF55697 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF55697 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF55697 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF55697 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Ank_4 PF13637.6 ORF54883 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF54883 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF54883 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF54883 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF54883 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF54883 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain NanE PF04131.14 ORF53245 - 1.6e-91 304.7 0.3 1.9e-91 304.5 0.3 1.0 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase IGPS PF00218.21 ORF53245 - 0.0052 16.0 0.0 0.11 11.6 0.0 2.1 1 1 1 2 2 2 1 Indole-3-glycerol phosphate synthase IMPDH PF00478.25 ORF53245 - 0.013 14.5 0.1 1.1 8.2 0.0 2.1 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain ThiG PF05690.14 ORF53245 - 0.024 14.0 0.2 0.14 11.4 0.2 2.0 1 1 1 2 2 2 0 Thiazole biosynthesis protein ThiG Thioredoxin PF00085.20 ORF53046 - 1.4e-06 28.2 0.0 3.9e-06 26.8 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin DLP_helical PF18709.1 ORF53046 - 0.024 13.9 1.4 0.032 13.5 1.4 1.1 1 0 0 1 1 1 0 Dynamin-like helical domain DUF1054 PF06335.12 ORF53046 - 0.068 13.1 0.8 0.092 12.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Uso1_p115_C PF04871.13 ORF53046 - 0.11 12.9 9.3 0.16 12.3 9.3 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Cep57_CLD_2 PF14197.6 ORF53046 - 0.15 12.1 2.2 0.32 11.1 2.2 1.5 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 OmpH PF03938.14 ORF53046 - 0.49 10.7 6.6 0.8 10.0 6.6 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TMF_DNA_bd PF12329.8 ORF53046 - 4.6 7.3 16.9 34 4.5 12.7 3.0 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Ank_4 PF13637.6 ORF52973 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF52973 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF52973 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF52973 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF52973 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF52973 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain VPS9 PF02204.18 ORF52864 - 6.4e-17 61.7 1.8 6.5e-17 61.6 0.3 1.8 2 0 0 2 2 2 1 Vacuolar sorting protein 9 (VPS9) domain Chordopox_A13L PF05961.11 ORF52649 - 0.00027 21.1 0.7 0.00027 21.1 0.7 2.0 2 0 0 2 2 2 1 Chordopoxvirus A13L protein EphA2_TM PF14575.6 ORF52649 - 0.0045 17.8 1.2 0.049 14.5 1.2 2.3 1 1 0 1 1 1 1 Ephrin type-A receptor 2 transmembrane domain TMEM154 PF15102.6 ORF52649 - 0.022 14.7 0.2 0.022 14.7 0.2 2.1 2 1 0 2 2 2 0 TMEM154 protein family DUF4330 PF14221.6 ORF52649 - 0.028 14.7 0.1 0.047 13.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) PspB PF06667.12 ORF52649 - 0.049 13.7 0.9 2 8.5 0.1 2.3 2 0 0 2 2 2 0 Phage shock protein B Peptidase_S49_N PF08496.10 ORF52649 - 0.057 13.5 2.6 0.084 12.9 0.0 2.2 3 0 0 3 3 3 0 Peptidase family S49 N-terminal DUF4448 PF14610.6 ORF52649 - 0.069 12.9 0.3 0.22 11.3 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4448) PsbJ PF01788.17 ORF52649 - 0.082 12.8 2.9 0.14 12.1 2.9 1.3 1 0 0 1 1 1 0 PsbJ TPR_21 PF09976.9 ORF52649 - 0.13 12.0 0.0 0.38 10.5 0.0 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat-like domain DUF3139 PF11337.8 ORF52649 - 0.21 12.3 2.1 0.31 11.7 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) DUF4199 PF13858.6 ORF52649 - 0.68 10.3 0.0 0.68 10.3 0.0 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF4199) RIFIN PF02009.16 ORF52649 - 1.8 8.4 5.1 1.2 9.0 1.0 2.0 2 0 0 2 2 2 0 Rifin LRR_9 PF14580.6 ORF52338 - 1.2e-14 54.2 3.0 4e-14 52.5 2.9 1.8 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 ORF52338 - 3.9e-10 39.8 11.9 1.7e-06 28.3 3.4 3.5 1 1 3 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF52338 - 1.5e-05 24.6 14.2 0.00083 19.1 5.4 3.4 3 1 1 4 4 4 2 Leucine rich repeat Ank_4 PF13637.6 ORF51321 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF51321 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF51321 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF51321 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF51321 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF51321 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Ank_4 PF13637.6 ORF50973 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF50973 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF50973 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF50973 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF50973 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF50973 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Response_reg PF00072.24 ORF46274 - 3.5e-19 69.0 0.1 5e-19 68.5 0.1 1.2 1 0 0 1 1 1 1 Response regulator receiver domain CitT PF12431.8 ORF46274 - 0.031 14.6 0.2 0.062 13.7 0.2 1.5 1 0 0 1 1 1 0 Transcriptional regulator EcoRII-N PF09217.10 ORF46274 - 0.058 13.1 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 Restriction endonuclease EcoRII, N-terminal HTH_11 PF08279.12 ORF46274 - 0.088 12.8 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 HTH domain zf-RING_2 PF13639.6 ORF45153 - 2.5e-10 40.5 14.8 4.3e-10 39.8 14.8 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 ORF45153 - 4.8e-06 26.2 12.8 4.8e-06 26.2 12.8 2.0 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 ORF45153 - 1.7e-05 25.0 13.9 7.9e-05 22.9 13.9 2.1 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 ORF45153 - 3.5e-05 23.8 7.4 7.8e-05 22.7 7.3 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 ORF45153 - 4.1e-05 23.3 6.3 8.5e-05 22.3 6.3 1.6 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Rtf2 PF04641.12 ORF45153 - 5.6e-05 22.6 5.1 5.6e-05 22.6 5.1 1.4 1 1 0 1 1 1 1 Rtf2 RING-finger zf-RING_UBOX PF13445.6 ORF45153 - 0.00026 20.9 9.2 0.00026 20.9 9.2 1.8 1 1 1 2 2 2 1 RING-type zinc-finger Zn_ribbon_17 PF17120.5 ORF45153 - 0.00029 20.4 13.1 0.0012 18.4 13.1 1.9 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 ORF45153 - 0.00031 20.5 13.7 0.00069 19.4 13.7 1.6 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF45153 - 0.00036 20.3 14.7 0.00072 19.4 14.7 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 ORF45153 - 0.0034 17.3 12.3 0.0059 16.5 12.3 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_1 PF14446.6 ORF45153 - 0.11 12.5 14.0 0.06 13.3 6.1 2.4 1 1 0 2 2 2 0 Prokaryotic RING finger family 1 zf-C3HC4_3 PF13920.6 ORF45153 - 0.13 12.2 11.7 0.24 11.3 11.7 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF45153 - 0.16 11.9 13.8 7.4 6.5 13.8 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 FANCL_C PF11793.8 ORF45153 - 0.54 10.5 10.2 1.7 8.9 10.2 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain DUF4451 PF14616.6 ORF45153 - 0.61 10.3 6.1 0.41 10.9 0.7 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4451) RINGv PF12906.7 ORF45153 - 0.97 9.6 12.1 2.7 8.2 12.0 1.9 1 1 0 1 1 1 0 RING-variant domain zf-C2H2_9 PF16293.5 ORF45153 - 1.4 8.8 6.4 8.3 6.3 0.1 2.8 2 0 0 2 2 2 0 C2H2 type zinc-finger (1 copy) zf-C3HC4_4 PF15227.6 ORF45153 - 2 8.6 11.3 5 7.4 11.3 1.7 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Zf_RING PF16744.5 ORF45153 - 4.4 7.5 10.3 1.9 8.7 6.6 2.2 1 1 1 2 2 2 0 KIAA1045 RING finger H-kinase_dim PF02895.14 ORF43156 - 0.19 12.2 0.0 0.39 11.1 0.0 1.5 1 0 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain 14-3-3 PF00244.20 ORF42946 - 5.6e-71 238.6 11.7 6.4e-71 238.4 11.7 1.0 1 0 0 1 1 1 1 14-3-3 protein TPR_12 PF13424.6 ORF42946 - 0.093 13.0 3.0 0.52 10.6 0.2 3.2 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF42946 - 0.15 13.0 1.3 16 6.6 0.0 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat GARP PF16731.5 ORF42946 - 0.23 11.1 6.4 0.22 11.2 3.6 2.2 2 1 0 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma LMBR1 PF04791.16 ORF42946 - 0.33 9.8 1.3 0.41 9.5 0.9 1.3 1 1 0 1 1 1 0 LMBR1-like membrane protein DUF4363 PF14276.6 ORF42946 - 1.1 9.4 9.5 6.5 6.9 0.4 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4363) DUF1890 PF09001.11 ORF42946 - 1.7 9.1 4.6 6.1 7.2 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF1890) Band_7 PF01145.25 ORF40085 - 9.7e-08 32.2 0.3 9.7e-08 32.2 0.3 1.9 2 0 0 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 ORF40085 - 2.9e-07 30.4 0.0 5.6e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of band_7 Band_7_1 PF13421.6 ORF40085 - 0.0004 20.2 0.7 0.0079 15.9 0.0 2.1 2 0 0 2 2 2 1 SPFH domain-Band 7 family DUF3598 PF12204.8 ORF40085 - 0.02 14.4 0.1 0.037 13.5 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3598) DUF2779 PF11074.8 ORF37 - 0.012 16.1 0.7 0.22 12.0 0.7 2.3 1 1 0 1 1 1 0 Domain of unknown function(DUF2779) Bystin PF05291.11 ORF37 - 0.021 14.1 0.0 0.028 13.7 0.0 1.2 1 0 0 1 1 1 0 Bystin zf-C2H2 PF00096.26 ORF36897 - 1.2e-14 53.8 30.7 1.1e-06 28.8 3.6 4.9 6 0 0 6 6 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF36897 - 1.5e-10 40.9 23.4 0.00012 22.6 2.1 4.3 5 0 0 5 5 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF36897 - 3.3e-08 33.6 7.3 8.1e-06 26.0 0.4 4.7 5 1 0 5 5 4 2 Zinc-finger double domain zf-C2H2_2 PF12756.7 ORF36897 - 0.00014 22.2 11.2 0.0094 16.3 4.6 2.9 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-met PF12874.7 ORF36897 - 0.0012 19.2 9.4 0.057 13.8 0.2 4.5 4 0 0 4 4 4 1 Zinc-finger of C2H2 type Rpr2 PF04032.16 ORF36897 - 0.0017 18.6 9.7 0.25 11.7 0.1 3.6 2 1 1 3 3 3 2 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-BED PF02892.15 ORF36897 - 0.0022 18.0 12.5 0.011 15.7 1.9 4.4 3 1 2 5 5 4 2 BED zinc finger zf-C2H2_11 PF16622.5 ORF36897 - 0.0045 16.7 9.4 0.015 15.1 1.9 2.8 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 ORF36897 - 0.008 16.2 18.8 0.035 14.1 2.5 4.4 4 0 0 4 4 4 2 C2H2-type zinc finger zinc_ribbon_9 PF14369.6 ORF36897 - 0.012 15.8 2.2 0.6 10.4 0.0 3.1 3 0 0 3 3 2 0 zinc-ribbon zf-C2H2_3rep PF18868.1 ORF36897 - 0.021 15.5 8.9 0.46 11.2 0.7 3.0 1 1 2 3 3 3 0 Zinc finger C2H2-type, 3 repeats zf-H2C2_5 PF13909.6 ORF36897 - 0.037 13.8 17.9 0.057 13.2 3.7 3.9 3 0 0 3 3 3 0 C2H2-type zinc-finger domain PyrI_C PF02748.15 ORF36897 - 0.042 13.7 5.7 0.34 10.9 0.3 3.1 2 1 0 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-Dof PF02701.15 ORF36897 - 0.11 12.6 6.8 0.4 10.9 0.8 2.7 1 1 1 2 2 2 0 Dof domain, zinc finger zf-AN1 PF01428.16 ORF36897 - 0.26 11.5 8.2 17 5.7 3.3 3.6 2 1 1 3 3 3 0 AN1-like Zinc finger XPA_N PF01286.18 ORF36897 - 0.55 10.3 7.2 24 5.1 0.0 4.0 4 0 0 4 4 4 0 XPA protein N-terminal zf-LYAR PF08790.11 ORF36897 - 1.1 9.3 10.8 14 5.7 0.2 4.4 4 0 0 4 4 4 0 LYAR-type C2HC zinc finger CpXC PF14353.6 ORF36897 - 1.4 9.0 6.6 4.9 7.2 2.9 2.9 2 1 1 3 3 3 0 CpXC protein YdjO PF14169.6 ORF36897 - 2.1 8.1 6.3 1.1 9.1 2.0 2.8 1 1 1 2 2 2 0 Cold-inducible protein YdjO Zn_Tnp_IS1595 PF12760.7 ORF36897 - 3.2 7.8 9.4 1.7 8.7 5.1 2.6 2 1 0 2 2 2 0 Transposase zinc-ribbon domain DUF2256 PF10013.9 ORF36897 - 3.2 7.9 7.4 7.6 6.7 0.1 3.2 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-C2H2_jaz PF12171.8 ORF36897 - 3.8 7.9 16.3 0.42 10.9 1.8 3.9 4 0 0 4 4 3 0 Zinc-finger double-stranded RNA-binding zf-trcl PF13451.6 ORF36897 - 4.1 7.4 8.0 5.5 7.0 0.1 3.8 3 0 0 3 3 3 0 Probable zinc-ribbon domain zf_ZIC PF18366.1 ORF36897 - 5.6 7.2 9.4 11 6.3 0.1 3.6 4 0 0 4 4 4 0 Zic proteins zinc finger domain Pet191_N PF10203.9 ORF3656 - 0.11 12.8 0.8 0.23 11.8 0.8 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein PET191 C2 PF00168.30 ORF35098 - 7.2e-08 32.7 0.0 1e-07 32.2 0.0 1.2 1 0 0 1 1 1 1 C2 domain Ank_4 PF13637.6 ORF33784 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF33784 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF33784 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF33784 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF33784 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF33784 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Scramblase PF03803.15 ORF33427 - 5e-15 55.4 1.8 5.8e-15 55.2 1.8 1.1 1 0 0 1 1 1 1 Scramblase Ank_4 PF13637.6 ORF32576 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF32576 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF32576 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF32576 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF32576 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF32576 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Oxysterol_BP PF01237.18 ORF30439 - 2.4e-20 72.7 0.0 3e-20 72.4 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein DUF218 PF02698.17 ORF30251 - 6.9e-18 64.9 0.0 8.9e-18 64.6 0.0 1.1 1 0 0 1 1 1 1 DUF218 domain DAG_kinase_N PF14513.6 ORF29128 - 0.1 12.8 0.9 0.15 12.2 0.9 1.2 1 0 0 1 1 1 0 Diacylglycerol kinase N-terminus Tetraspanin PF00335.20 ORF26227 - 3.5e-12 46.5 2.6 6.3e-12 45.7 2.6 1.5 1 1 0 1 1 1 1 Tetraspanin family TPH PF13868.6 ORF25041 - 2.4e-28 98.7 65.4 2.9e-28 98.4 65.4 1.1 1 0 0 1 1 1 1 Trichohyalin-plectin-homology domain SNAD1 PF18744.1 ORF25041 - 0.058 13.3 0.1 0.13 12.1 0.0 1.6 1 1 1 2 2 2 0 Secreted Novel AID/APOBEC-like Deaminase 1 DUF4286 PF14114.6 ORF25041 - 0.11 13.0 4.8 0.088 13.3 2.2 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4286) tRNA_U5-meth_tr PF05958.11 ORF25041 - 0.63 9.0 9.4 0.87 8.5 9.4 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase YjbH PF06082.11 ORF25041 - 1.6 7.4 7.3 2 7.1 7.3 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH zf-LITAF-like PF10601.9 ORF23715 - 3.2e-08 33.7 13.0 4.1e-08 33.4 13.0 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain Thioredoxin PF00085.20 ORF21656 - 1.4e-06 28.2 0.0 3.9e-06 26.8 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin DLP_helical PF18709.1 ORF21656 - 0.024 13.9 1.4 0.032 13.5 1.4 1.1 1 0 0 1 1 1 0 Dynamin-like helical domain DUF1054 PF06335.12 ORF21656 - 0.068 13.1 0.8 0.092 12.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Uso1_p115_C PF04871.13 ORF21656 - 0.11 12.9 9.3 0.16 12.3 9.3 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Cep57_CLD_2 PF14197.6 ORF21656 - 0.15 12.1 2.2 0.32 11.1 2.2 1.5 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 OmpH PF03938.14 ORF21656 - 0.49 10.7 6.6 0.8 10.0 6.6 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TMF_DNA_bd PF12329.8 ORF21656 - 4.6 7.3 16.9 34 4.5 12.7 3.0 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding PPR_2 PF13041.6 ORF20764 - 0.0007 19.7 0.0 0.0012 19.0 0.0 1.4 1 0 0 1 1 1 1 PPR repeat family 14-3-3 PF00244.20 ORF18079 - 4.9e-69 232.2 14.3 5.6e-69 232.0 14.3 1.0 1 0 0 1 1 1 1 14-3-3 protein LMBR1 PF04791.16 ORF18079 - 0.55 9.1 2.5 0.43 9.4 1.3 1.4 1 1 0 1 1 1 0 LMBR1-like membrane protein Thioredoxin PF00085.20 ORF17850 - 1.4e-06 28.2 0.0 3.9e-06 26.8 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin DLP_helical PF18709.1 ORF17850 - 0.024 13.9 1.4 0.032 13.5 1.4 1.1 1 0 0 1 1 1 0 Dynamin-like helical domain DUF1054 PF06335.12 ORF17850 - 0.068 13.1 0.8 0.092 12.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Uso1_p115_C PF04871.13 ORF17850 - 0.11 12.9 9.3 0.16 12.3 9.3 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Cep57_CLD_2 PF14197.6 ORF17850 - 0.15 12.1 2.2 0.32 11.1 2.2 1.5 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 OmpH PF03938.14 ORF17850 - 0.49 10.7 6.6 0.8 10.0 6.6 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TMF_DNA_bd PF12329.8 ORF17850 - 4.6 7.3 16.9 34 4.5 12.7 3.0 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF1836 PF08876.11 ORF16516 - 8.1 6.5 9.8 0.11 12.6 0.8 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF1836) SelR PF01641.18 ORF152297 - 2.5e-51 172.8 0.5 4.6e-51 172.0 0.5 1.4 1 0 0 1 1 1 1 SelR domain Ank_4 PF13637.6 ORF149962 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF149962 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF149962 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF149962 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF149962 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF149962 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain ADK PF00406.22 ORF149189 - 3.8e-47 160.2 0.0 4.7e-47 159.9 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 ORF149189 - 6.1e-22 78.5 0.4 8.4e-22 78.1 0.0 1.4 2 0 0 2 2 2 1 AAA domain ADK_lid PF05191.14 ORF149189 - 3.3e-16 59.0 0.0 5.6e-16 58.2 0.0 1.4 1 0 0 1 1 1 1 Adenylate kinase, active site lid AAA_18 PF13238.6 ORF149189 - 3.1e-05 24.5 0.0 6.3e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 ORF149189 - 0.0034 17.2 0.0 0.0055 16.5 0.0 1.4 1 0 0 1 1 1 1 Cytidylate kinase Zeta_toxin PF06414.12 ORF149189 - 0.05 12.9 0.0 0.094 12.0 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_33 PF13671.6 ORF149189 - 0.054 13.6 0.0 0.12 12.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 ORF149189 - 0.075 13.4 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA PF00004.29 ORF149189 - 0.11 12.9 0.0 0.16 12.4 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 ORF149189 - 0.15 11.9 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain Fumble PF03630.14 ORF147382 - 1.6e-59 201.7 2.9 1.9e-59 201.5 2.9 1.0 1 0 0 1 1 1 1 Fumble KbaA PF14089.6 ORF147382 - 0.17 11.7 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 KinB-signalling pathway activation in sporulation CMV_1a_C PF12503.8 ORF147379 - 0.068 13.2 0.5 0.39 10.7 0.3 2.2 2 0 0 2 2 2 0 Cucumber mosaic virus 1a protein C terminal CadC_C1 PF18500.1 ORF146248 - 5.1e-22 78.5 0.1 7.8e-22 77.8 0.1 1.3 1 0 0 1 1 1 1 CadC C-terminal domain 1 TPR_2 PF07719.17 ORF146248 - 0.0061 16.6 0.3 0.062 13.4 0.1 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat Mob1_phocein PF03637.17 ORF144863 - 1.6e-63 213.8 0.1 1.9e-63 213.5 0.1 1.1 1 0 0 1 1 1 1 Mob1/phocein family EF-hand_1 PF00036.32 ORF142560 - 6.7e-22 75.4 2.4 6.7e-07 28.4 0.1 3.8 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 ORF142560 - 4.1e-21 73.1 1.1 5.8e-06 25.8 0.0 4.2 4 0 0 4 4 4 3 EF-hand domain EF-hand_7 PF13499.6 ORF142560 - 7.7e-18 64.7 0.6 1.8e-10 41.1 0.5 2.6 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 ORF142560 - 1.2e-16 59.3 4.4 1e-05 24.8 0.1 3.5 3 0 0 3 3 3 3 EF hand EF-hand_8 PF13833.6 ORF142560 - 2e-08 34.0 0.9 0.028 14.3 0.0 3.5 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_9 PF14658.6 ORF142560 - 0.00096 19.4 0.0 3 8.3 0.0 2.9 3 0 0 3 3 3 2 EF-hand domain SPARC_Ca_bdg PF10591.9 ORF142560 - 0.0013 19.0 0.1 1.3 9.4 0.1 2.3 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 ORF142560 - 0.016 15.1 0.4 0.36 10.8 0.3 2.6 1 1 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand NMN_transporter PF04973.12 ORF142449 - 1.9e-50 171.3 26.8 2.9e-50 170.7 26.8 1.3 1 0 0 1 1 1 1 Nicotinamide mononucleotide transporter SurA_N_3 PF13624.6 ORF142449 - 0.33 10.7 2.8 0.7 9.7 2.8 1.6 1 0 0 1 1 1 0 SurA N-terminal domain LON_substr_bdg PF02190.16 ORF142258 - 0.042 13.7 0.2 0.082 12.8 0.2 1.5 1 1 0 1 1 1 0 ATP-dependent protease La (LON) substrate-binding domain DUF3492 PF11997.8 ORF142258 - 0.079 12.7 0.0 0.14 11.9 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3492) Thioredoxin PF00085.20 ORF141224 - 1.4e-06 28.2 0.0 3.9e-06 26.8 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin DLP_helical PF18709.1 ORF141224 - 0.024 13.9 1.4 0.032 13.5 1.4 1.1 1 0 0 1 1 1 0 Dynamin-like helical domain DUF1054 PF06335.12 ORF141224 - 0.068 13.1 0.8 0.092 12.7 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1054) Uso1_p115_C PF04871.13 ORF141224 - 0.11 12.9 9.3 0.16 12.3 9.3 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Cep57_CLD_2 PF14197.6 ORF141224 - 0.15 12.1 2.2 0.32 11.1 2.2 1.5 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 OmpH PF03938.14 ORF141224 - 0.49 10.7 6.6 0.8 10.0 6.6 1.3 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) TMF_DNA_bd PF12329.8 ORF141224 - 4.6 7.3 16.9 34 4.5 12.7 3.0 2 1 0 2 2 2 0 TATA element modulatory factor 1 DNA binding EamA PF00892.20 ORF13362 - 1.1e-14 54.8 23.4 4.7e-12 46.2 10.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family DUF4203 PF13886.6 ORF13362 - 0.011 15.4 6.1 0.011 15.4 6.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4203) DUF4131 PF13567.6 ORF13362 - 0.38 10.4 15.2 4.1 7.0 1.2 3.1 2 1 0 3 3 3 0 Domain of unknown function (DUF4131) DUF1129 PF06570.11 ORF13362 - 2.4 7.6 13.3 0.34 10.4 5.8 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1129) Ank_4 PF13637.6 ORF132207 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF132207 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF132207 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF132207 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF132207 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF132207 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain FAM180 PF15173.6 ORF131622 - 0.014 15.4 0.1 1.6 8.7 0.0 2.2 2 0 0 2 2 2 0 FAM180 family Apt1 PF10351.9 ORF124086 - 2e-07 30.3 12.5 2.5e-07 29.9 12.5 1.0 1 0 0 1 1 1 1 Golgi-body localisation protein domain IL17R_fnIII_D2 PF16578.5 ORF124086 - 0.54 10.8 2.4 1.3 9.6 0.4 2.4 2 1 1 3 3 3 0 Interleukin 17 receptor D Gti1_Pac2 PF09729.9 ORF124086 - 0.76 9.8 7.8 0.71 9.9 6.8 1.4 1 1 0 1 1 1 0 Gti1/Pac2 family DUF4612 PF15389.6 ORF124086 - 5.3 8.1 11.0 19 6.4 10.9 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4612) PP2C PF00481.21 ORF120347 - 8.3e-17 61.7 0.3 1.2e-16 61.1 0.3 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 ORF120347 - 1.4e-06 28.1 0.8 2e-06 27.6 0.8 1.3 1 0 0 1 1 1 1 Protein phosphatase 2C PAE PF03283.13 ORF120347 - 0.083 12.0 0.6 0.2 10.8 0.1 1.7 2 0 0 2 2 2 0 Pectinacetylesterase Ank_4 PF13637.6 ORF118800 - 1.4e-18 67.0 0.1 1.1e-11 45.0 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF118800 - 4.3e-15 56.1 0.0 1e-14 54.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF118800 - 2.7e-13 49.8 0.0 1.6e-10 41.0 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF118800 - 6.7e-13 47.6 0.0 1.4e-06 28.1 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 ORF118800 - 2.9e-10 40.1 0.0 4.4e-06 26.9 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat SdrD_B PF17210.3 ORF118800 - 0.028 14.6 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 SdrD B-like domain Pkinase_Tyr PF07714.17 ORF116765 - 3.7e-29 101.8 0.2 4.4e-29 101.5 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF116765 - 7.5e-24 84.5 0.6 9.1e-24 84.2 0.6 1.0 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 ORF116765 - 0.013 14.8 0.0 0.015 14.6 0.0 1.1 1 0 0 1 1 1 0 Kinase-like 7tm_1 PF00001.21 ORF115847 - 0.0001 21.7 0.4 0.00016 21.1 0.4 1.3 1 0 0 1 1 1 1 7 transmembrane receptor (rhodopsin family) 7TMR-DISM_7TM PF07695.11 ORF115847 - 0.0029 17.5 11.9 0.0029 17.5 11.9 1.9 2 1 0 2 2 2 1 7TM diverse intracellular signalling Sarcoglycan_1 PF04790.13 ORF115847 - 0.069 12.5 0.2 0.069 12.5 0.2 2.2 2 0 0 2 2 2 0 Sarcoglycan complex subunit protein Rrp44_S1 PF17215.3 ORF115847 - 0.1 12.6 0.4 0.51 10.3 0.0 2.1 2 0 0 2 2 2 0 S1 domain MARVEL PF01284.23 ORF115847 - 1.5 8.9 7.9 2.8 8.0 6.0 2.3 1 1 1 2 2 2 0 Membrane-associating domain Tetraspanin PF00335.20 ORF115847 - 1.8 8.2 8.2 8.1 6.1 4.3 2.3 1 1 1 2 2 2 0 Tetraspanin family OSTbeta PF15048.6 ORF115847 - 2.5 8.2 4.6 1.2 9.3 0.1 2.1 1 1 1 2 2 2 0 Organic solute transporter subunit beta protein DUF373 PF04123.13 ORF115847 - 3.4 7.0 7.0 0.74 9.2 3.1 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF373) DUF2475 PF10629.9 ORF115605 - 0.19 12.0 0.0 0.34 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2475) BCAS2 PF05700.11 ORF11430 - 9.9e-48 162.6 7.0 1.1e-47 162.4 7.0 1.0 1 0 0 1 1 1 1 Breast carcinoma amplified sequence 2 (BCAS2) DUF4239 PF14023.6 ORF11430 - 0.0089 15.8 1.5 0.075 12.7 0.8 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF4239) Band_7 PF01145.25 ORF113115 - 9.7e-08 32.2 0.3 9.7e-08 32.2 0.3 1.9 2 0 0 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 ORF113115 - 2.9e-07 30.4 0.0 5.6e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of band_7 Band_7_1 PF13421.6 ORF113115 - 0.0004 20.2 0.7 0.0079 15.9 0.0 2.1 2 0 0 2 2 2 1 SPFH domain-Band 7 family DUF3598 PF12204.8 ORF113115 - 0.02 14.4 0.1 0.037 13.5 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3598) DUF406 PF04175.12 ORF113115 - 0.3 11.6 2.6 15 6.2 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF406) PPR_2 PF13041.6 ORF108541 - 1.2e-09 38.2 0.0 0.084 13.1 0.0 4.2 4 0 0 4 4 4 3 PPR repeat family PPR_3 PF13812.6 ORF108541 - 7.4e-05 22.7 0.0 0.0098 15.9 0.0 3.4 4 0 0 4 4 4 1 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF108541 - 0.033 13.5 0.0 0.058 12.7 0.0 1.4 1 0 0 1 1 1 0 Pentacotripeptide-repeat region of PRORP IL4 PF00727.18 ORF108541 - 0.16 12.2 0.0 0.29 11.4 0.0 1.4 1 0 0 1 1 1 0 Interleukin 4 ECH_1 PF00378.20 ORF105969 - 7.7e-23 81.1 0.0 8.6e-23 80.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 ORF105969 - 1.1e-08 35.0 0.0 1.4e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase zn-ribbon_14 PF16503.5 ORF101519 - 1.3e-16 59.8 5.9 1.3e-16 59.7 2.0 2.4 2 0 0 2 2 2 1 Zinc-ribbon ATP_bind_3 PF01171.20 ORF101519 - 7.8e-10 38.8 0.0 1.4e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 PP-loop family SPASM PF13186.6 ORF101519 - 0.004 17.6 0.3 0.067 13.7 0.0 2.4 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain RecR PF02132.15 ORF101519 - 0.77 9.4 7.3 0.13 11.8 2.3 2.2 2 0 0 2 2 2 0 RecR protein Peptidase_C12 PF01088.21 ORF100837 - 7.8e-46 156.5 0.0 8.6e-46 156.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 HK_sensor PF16750.5 NODE_30531_length_713_cov_2.564897_g24138_i0forward_frame_1 - 0.0092 16.3 0.0 0.022 15.0 0.0 1.6 1 0 0 1 1 1 1 Sensor domain of 2-component histidine kinase Helicase_C PF00271.31 NODE_30529_length_713_cov_3.513274_g24136_i0forward_frame_1 - 5.5e-18 65.3 0.0 9.2e-18 64.6 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 NODE_30529_length_713_cov_3.513274_g24136_i0forward_frame_1 - 0.23 10.6 0.0 0.33 10.1 0.0 1.1 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase MORN PF02493.20 NODE_30523_length_713_cov_55.095870_g24130_i0reverse_frame_1 - 0.00099 18.9 0.3 0.037 13.9 0.0 2.9 2 0 0 2 2 2 1 MORN repeat FeS PF04060.13 NODE_30521_length_713_cov_83.705015_g24128_i0reverse_frame_1 - 0.2 11.4 0.9 0.49 10.1 0.9 1.6 1 0 0 1 1 1 0 Putative Fe-S cluster TetR_C_31 PF17940.1 NODE_30521_length_713_cov_83.705015_g24128_i0forward_frame_1 - 0.38 11.0 8.2 0.37 11.0 4.9 2.2 1 1 2 3 3 3 0 Tetracyclin repressor-like, C-terminal domain VitK2_biosynth PF02621.14 NODE_30502_length_713_cov_257.765487_g24111_i0forward_frame_1 - 0.049 13.1 0.0 0.12 11.9 0.0 1.6 1 1 0 1 1 1 0 Menaquinone biosynthesis DUF1324 PF07038.11 NODE_30490_length_713_cov_813.060472_g24101_i0forward_frame_1 - 0.12 12.6 1.2 0.76 10.1 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1324) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks90.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks90.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks90.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks90.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:35 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ribosomal_S8 PF00410.19 NODE_30487_length_713_cov_1247.746313_g23480_i1forward_frame_1 - 0.096 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S8 Abhydrolase_4 PF08386.10 NODE_30454_length_714_cov_156.817378_g24074_i0reverse_frame_1 - 0.049 13.7 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 TAP-like protein PAG PF15347.6 NODE_30404_length_715_cov_166.042647_g21502_i1reverse_frame_2 - 0.77 8.7 3.5 0.49 9.4 1.1 1.7 1 1 1 2 2 2 0 Phosphoprotein associated with glycosphingolipid-enriched TrmO_C PF18389.1 NODE_30404_length_715_cov_166.042647_g21502_i1forward_frame_2 - 0.13 12.4 1.2 0.24 11.6 0.1 1.9 2 0 0 2 2 2 0 TrmO C-terminal domain DUF1980 PF09323.10 NODE_30390_length_715_cov_758.200000_g24024_i0reverse_frame_3 - 0.0064 16.4 1.8 0.0064 16.4 1.8 1.6 1 1 1 2 2 2 1 Domain of unknown function (DUF1980) PBP1_TM PF14812.6 NODE_30390_length_715_cov_758.200000_g24024_i0reverse_frame_3 - 0.013 15.9 1.9 0.018 15.4 0.4 1.9 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal SARAF PF06682.12 NODE_30390_length_715_cov_758.200000_g24024_i0reverse_frame_3 - 0.038 13.6 0.0 0.045 13.4 0.0 1.1 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis Orf78 PF06024.12 NODE_30390_length_715_cov_758.200000_g24024_i0reverse_frame_3 - 0.092 13.0 0.4 0.092 13.0 0.4 1.7 2 0 0 2 2 2 0 Orf78 (ac78) CBM46 PF18448.1 NODE_30385_length_715_cov_5142.542647_g23304_i1forward_frame_3 - 0.059 13.7 2.1 4.2 7.7 0.2 2.6 1 1 2 3 3 3 0 Carbohydrate binding domain Glyco_hydro_1 PF00232.18 NODE_30383_length_716_cov_3.888399_g24018_i0forward_frame_2 - 7.4e-50 169.7 0.5 8.7e-50 169.4 0.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 GHD PF17834.1 NODE_30381_length_716_cov_19.881057_g24016_i0forward_frame_3 - 0.1 12.6 0.4 0.18 11.9 0.4 1.4 1 0 0 1 1 1 0 Beta-sandwich domain in beta galactosidase Spc7_N PF15402.6 NODE_30381_length_716_cov_19.881057_g24016_i0forward_frame_2 - 2.1 6.5 6.1 2.3 6.4 6.1 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 B277 PF17623.2 NODE_30375_length_716_cov_95.005874_g24010_i0reverse_frame_2 - 0.043 12.9 17.6 0.55 9.3 1.7 3.1 2 1 1 3 3 3 0 Domain of unknown function Bowman-Birk_leg PF00228.20 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_3 - 0.21 12.0 5.6 1.1 9.7 0.1 3.0 2 0 0 2 2 2 0 Bowman-Birk serine protease inhibitor family DUF3481 PF11980.8 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_3 - 7.8 6.3 8.9 13 5.6 3.7 2.9 3 1 0 3 3 3 0 C-terminal domain of neuropilin glycoprotein RCC1_2 PF13540.6 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.00011 21.9 20.8 0.29 11.0 0.2 5.7 5 1 0 5 5 5 3 Regulator of chromosome condensation (RCC1) repeat DUF5540 PF17694.1 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.019 15.5 2.6 40 4.8 0.1 3.6 2 1 1 3 3 3 0 Family of unknown function (DUF5540) DUF155 PF02582.14 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.026 14.6 5.5 37 4.4 0.0 4.7 4 1 1 5 5 5 0 Uncharacterised ACR, YagE family COG1723 NOZZLE PF08744.10 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.078 12.5 2.1 0.12 11.8 1.6 1.4 1 1 0 1 1 1 0 Plant transcription factor NOZZLE UPF0180 PF03698.13 NODE_30375_length_716_cov_95.005874_g24010_i0forward_frame_2 - 0.15 12.2 1.4 1.4 9.2 0.1 2.8 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0180) MTS PF05175.14 NODE_30359_length_716_cov_197.375918_g23994_i0reverse_frame_3 - 5.8e-10 39.0 0.0 7.9e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 NODE_30359_length_716_cov_197.375918_g23994_i0reverse_frame_3 - 5.6e-09 35.9 0.0 8.7e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 NODE_30359_length_716_cov_197.375918_g23994_i0reverse_frame_3 - 3.3e-07 30.0 0.2 4.8e-07 29.5 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 NODE_30359_length_716_cov_197.375918_g23994_i0reverse_frame_3 - 0.0011 19.7 0.1 0.0021 18.7 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 NODE_30359_length_716_cov_197.375918_g23994_i0reverse_frame_3 - 0.0019 18.0 0.0 0.0029 17.4 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_16 PF10294.9 NODE_30359_length_716_cov_197.375918_g23994_i0reverse_frame_3 - 0.013 15.3 0.0 0.025 14.3 0.0 1.5 1 0 0 1 1 1 0 Lysine methyltransferase zf-RING_UBOX PF13445.6 NODE_30330_length_717_cov_53.922287_g23969_i0reverse_frame_3 - 0.0053 16.7 0.4 0.025 14.6 0.4 2.2 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 NODE_30330_length_717_cov_53.922287_g23969_i0reverse_frame_3 - 0.058 13.3 0.6 0.26 11.2 0.6 2.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) SRRM_C PF15230.6 NODE_30330_length_717_cov_53.922287_g23969_i0reverse_frame_3 - 0.083 13.5 1.4 0.22 12.1 1.4 1.7 1 0 0 1 1 1 0 Serine/arginine repetitive matrix protein C-terminus Auto_anti-p27 PF06677.12 NODE_30330_length_717_cov_53.922287_g23969_i0forward_frame_3 - 7.2 6.9 8.9 5.5 7.2 2.3 2.7 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF5093 PF17011.5 NODE_30328_length_717_cov_63.985337_g23967_i0reverse_frame_2 - 0.00014 22.2 4.7 0.00029 21.1 4.7 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5093) RhaA PF06134.11 ORF98068 - 1.9e-132 442.4 0.1 2.1e-132 442.2 0.1 1.0 1 0 0 1 1 1 1 L-rhamnose isomerase (RhaA) Sec34 PF04136.15 ORF96848 - 3.7 7.4 10.0 6 6.7 0.1 3.0 2 1 0 3 3 3 0 Sec34-like family Protoglobin PF11563.8 ORF96492 - 0.01 15.8 0.0 0.27 11.1 0.0 2.4 2 1 0 2 2 2 0 Protoglobin BLOC1S3 PF15753.5 ORF96492 - 0.17 12.0 2.0 0.43 10.7 2.0 1.8 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 Baculo_PEP_C PF04513.12 ORF96492 - 0.23 11.5 5.7 1.7 8.7 4.3 2.8 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus FANCI_S2 PF14676.6 ORF96492 - 0.95 9.7 7.0 0.35 11.2 0.7 2.6 2 1 0 2 2 2 0 FANCI solenoid 2 PV-1 PF06637.11 ORF95882 - 0.02 13.7 1.2 0.029 13.2 1.2 1.2 1 0 0 1 1 1 0 PV-1 protein (PLVAP) WD40 PF00400.32 ORF95859 - 1.6e-21 76.2 8.0 2.4e-05 25.0 0.1 4.8 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF95859 - 5.9e-08 32.9 0.4 4.7e-05 23.6 0.1 3.1 1 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 ORF95859 - 0.00013 21.9 0.1 0.38 10.6 0.0 2.1 1 1 1 2 2 2 2 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 ORF95859 - 0.035 13.1 0.0 0.089 11.7 0.0 1.9 1 1 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein DUF1774 PF08611.10 ORF91278 - 0.024 14.9 0.1 0.14 12.5 0.1 2.2 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF1774) Pyr_redox_2 PF07992.14 ORF89798 - 1.6e-15 57.1 0.0 2.2e-15 56.7 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF89798 - 0.00094 18.5 0.0 0.041 13.1 0.0 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 ORF89798 - 0.0026 17.4 1.2 0.6 9.6 0.2 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox PF00070.27 ORF89798 - 0.023 15.2 0.5 6.4 7.4 0.0 3.3 4 0 0 4 4 4 0 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 ORF89798 - 0.07 12.5 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 ThiF family HAD_2 PF13419.6 ORF79216 - 1.9e-14 54.2 0.0 9.7e-14 51.8 0.0 1.9 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF79216 - 3.5e-11 43.8 0.0 4.5e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF79216 - 1.8e-08 34.3 0.0 3.7e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like SWIRM-assoc_3 PF16498.5 ORF79216 - 0.13 12.5 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 SWIRM-associated domain at the C-terminal FHA PF00498.26 ORF78153 - 3.1e-09 37.1 0.0 4.8e-09 36.4 0.0 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 ORF78153 - 0.0031 17.8 0.0 0.0057 16.9 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Metallophos_C PF14008.6 ORF77842 - 0.019 15.8 0.1 0.035 15.0 0.1 1.4 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C UCR_14kD PF02271.16 ORF74847 - 0.098 12.6 0.0 0.16 12.0 0.0 1.2 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase complex 14kD subunit Methyltransf_24 PF13578.6 ORF74490 - 0.0045 18.0 0.0 0.0074 17.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 ORF74490 - 0.011 14.9 0.0 0.014 14.6 0.0 1.1 1 0 0 1 1 1 0 O-methyltransferase Scramblase PF03803.15 ORF73635 - 6.8e-10 38.6 0.5 1.3e-09 37.7 0.5 1.5 1 1 0 1 1 1 1 Scramblase PRK PF00485.18 ORF72154 - 2.7e-59 200.2 0.0 3.3e-59 200.0 0.0 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family GST_C_3 PF14497.6 ORF69185 - 0.0011 19.1 0.0 0.0017 18.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Tyrosinase PF00264.20 ORF68925 - 0.11 12.8 3.7 0.73 10.1 3.6 2.0 1 1 0 1 1 1 0 Common central domain of tyrosinase Endonuclease_7 PF02945.15 ORF66837 - 3.1 7.8 7.1 0.16 11.9 0.7 2.2 2 0 0 2 2 2 0 Recombination endonuclease VII CCDC32 PF14989.6 ORF66368 - 0.24 11.4 1.4 0.25 11.3 0.1 1.6 2 0 0 2 2 2 0 Coiled-coil domain containing 32 DUF5548 PF17702.1 ORF65099 - 0.0031 17.3 2.2 0.0036 17.1 0.2 1.8 2 0 0 2 2 2 1 Family of unknown function (DUF5548) EF-hand_5 PF13202.6 ORF62970 - 5.2e-11 41.5 1.7 0.00013 21.3 0.5 2.4 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 ORF62970 - 6.2e-09 34.8 0.7 0.0017 17.7 0.0 2.3 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF62970 - 7.8e-07 28.5 0.4 0.023 14.6 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 ORF62970 - 5.1e-06 26.2 0.1 8e-06 25.6 0.1 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF62970 - 1.2e-05 25.6 0.1 2.7e-05 24.5 0.1 1.6 1 1 0 1 1 1 1 EF-hand domain pair Dockerin_1 PF00404.18 ORF62970 - 0.066 13.4 0.5 4.6 7.5 0.5 2.2 1 1 0 1 1 1 0 Dockerin type I domain DUF1449 PF07290.11 ORF59253 - 0.59 9.7 4.7 2.2 7.9 4.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1449) TMEM154 PF15102.6 ORF59253 - 1 9.2 6.4 0.17 11.8 2.2 1.8 2 0 0 2 2 2 0 TMEM154 protein family Baculo_11_kDa PF06143.11 ORF59253 - 7 6.3 11.8 1.2 8.8 0.7 3.2 3 0 0 3 3 3 0 Baculovirus 11 kDa family PV-1 PF06637.11 ORF59111 - 0.02 13.7 1.2 0.029 13.2 1.2 1.2 1 0 0 1 1 1 0 PV-1 protein (PLVAP) DUF1682 PF07946.14 ORF58228 - 9.8e-18 64.4 0.1 1.4e-17 63.9 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1682) DUF5617 PF18493.1 ORF54676 - 0.00059 19.9 2.6 0.11 12.6 0.1 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF5617) Imm8 PF15586.6 ORF54676 - 0.065 13.3 0.4 0.065 13.3 0.4 1.7 2 0 0 2 2 2 0 Immunity protein 8 FumaraseC_C PF10415.9 ORF5414 - 0.032 14.6 0.3 0.11 12.9 0.0 2.0 2 0 0 2 2 2 0 Fumarase C C-terminus GREB1 PF15782.5 ORF5414 - 2.2 5.3 17.6 2.5 5.1 17.6 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Hamartin PF04388.12 ORF5162 - 6.6 5.3 13.2 7.7 5.1 13.2 1.1 1 0 0 1 1 1 0 Hamartin protein DUF3367 PF11847.8 ORF51213 - 0.79 7.5 7.0 1 7.1 7.0 1.1 1 0 0 1 1 1 0 Alpha-(1->3)-arabinofuranosyltransferase 14-3-3 PF00244.20 ORF51020 - 9.3e-70 234.6 9.4 1e-69 234.4 9.4 1.0 1 0 0 1 1 1 1 14-3-3 protein BRCA-2_OB3 PF09104.10 ORF51020 - 0.0031 17.2 0.5 0.008 15.8 0.1 1.9 2 0 0 2 2 2 1 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 DUF2225 PF09986.9 ORF51020 - 0.0083 15.9 4.6 0.03 14.1 4.2 2.1 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2225) Gp-FAR-1 PF05823.12 ORF51020 - 0.44 10.9 8.0 0.034 14.5 1.9 2.1 2 1 1 3 3 3 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DUF5633 PF18656.1 ORF51020 - 3.7 7.5 8.0 1.3 9.0 3.3 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5633) FumaraseC_C PF10415.9 ORF50145 - 0.032 14.6 0.3 0.11 12.9 0.0 2.0 2 0 0 2 2 2 0 Fumarase C C-terminus GREB1 PF15782.5 ORF50145 - 2.2 5.3 17.6 2.5 5.1 17.6 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer YEATS PF03366.16 ORF49145 - 2.1e-09 37.2 1.9 2.3e-09 37.1 0.6 1.7 2 0 0 2 2 1 1 YEATS family zf-C3HC4 PF00097.25 ORF49145 - 5.8e-09 35.7 11.3 1.1e-08 34.8 11.3 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF49145 - 2.3e-08 33.8 7.3 3.3e-08 33.3 7.3 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF49145 - 3.6e-08 33.1 10.9 6.1e-08 32.4 10.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF49145 - 7.2e-08 32.6 8.9 1.2e-07 31.9 8.9 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_4 PF15227.6 ORF49145 - 7.1e-06 26.1 10.0 1.4e-05 25.2 10.0 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 ORF49145 - 1.4e-05 24.9 6.3 2.5e-05 24.1 6.3 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF49145 - 4e-05 23.6 5.7 4e-05 23.6 5.7 1.9 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF49145 - 0.00034 20.5 11.4 0.0015 18.5 11.7 1.9 1 1 1 2 2 2 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 ORF49145 - 0.00088 19.3 2.8 0.002 18.2 2.8 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.8 ORF49145 - 0.0016 18.2 7.0 0.0033 17.2 7.0 1.6 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_4 PF14570.6 ORF49145 - 0.0048 16.7 7.3 0.011 15.4 7.3 1.7 1 1 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-rbx1 PF12678.7 ORF49145 - 0.0072 16.6 10.0 0.027 14.8 10.0 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 ORF49145 - 0.03 14.5 6.9 0.03 14.5 6.9 2.0 1 1 1 2 2 2 0 zinc RING finger of MSL2 zf-RING-like PF08746.11 ORF49145 - 0.037 14.3 6.7 0.074 13.4 6.7 1.5 1 0 0 1 1 1 0 RING-like domain Zn-C2H2_12 PF18112.1 ORF49145 - 2.2 8.8 7.2 18 5.9 0.6 3.2 3 0 0 3 3 3 0 Autophagy receptor zinc finger-C2H2 domain YdaS_antitoxin PF15943.5 ORF48377 - 0.073 12.9 0.1 0.21 11.5 0.1 1.8 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT CCT PF06203.14 ORF47856 - 1.8e-05 24.7 5.8 4.1e-05 23.5 5.8 1.6 1 0 0 1 1 1 1 CCT motif HalX PF08663.10 ORF47697 - 0.063 13.6 0.3 0.18 12.1 0.2 1.8 2 0 0 2 2 2 0 HalX domain Phage_holin_5_2 PF16079.5 ORF45954 - 0.65 10.4 4.6 1.1 9.6 0.1 2.6 2 1 0 2 2 2 0 Phage holin family Hol44, in holin superfamily V Gemini_AL2 PF01440.16 ORF45600 - 0.19 12.2 0.9 0.3 11.5 0.9 1.3 1 0 0 1 1 1 0 Geminivirus AL2 protein Ribosomal_L37ae PF01780.19 ORF42331 - 0.48 10.5 4.5 0.18 11.9 1.5 1.9 2 0 0 2 2 2 0 Ribosomal L37ae protein family Med21 PF11221.8 ORF42331 - 0.76 10.0 16.8 1.8 8.8 16.8 1.7 1 1 0 1 1 1 0 Subunit 21 of Mediator complex ABC2_membrane PF01061.24 ORF40645 - 1.3e-39 135.8 17.5 1.8e-39 135.4 17.5 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF40645 - 2.3e-11 43.4 9.1 3.2e-11 42.9 9.1 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 ORF40645 - 0.024 13.9 2.6 0.059 12.7 2.6 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein PHO4 PF01384.20 ORF40645 - 0.092 11.8 1.3 0.12 11.4 1.3 1.3 1 0 0 1 1 1 0 Phosphate transporter family DEC-1_N PF04625.13 ORF38091 - 1.7 7.6 3.7 1.8 7.5 3.7 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region PRK PF00485.18 ORF36483 - 0.00032 20.5 0.0 0.00061 19.6 0.0 1.5 1 1 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 ORF36483 - 0.0021 18.6 0.1 0.031 14.8 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 ORF36483 - 0.007 16.5 0.0 0.11 12.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF36483 - 0.0088 16.4 0.0 0.016 15.6 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF36483 - 0.013 15.8 0.0 0.024 14.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 ORF36483 - 0.065 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 ORF36483 - 0.11 12.2 0.0 0.35 10.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain His_Phos_1 PF00300.22 ORF3543 - 1.1e-54 185.1 0.4 1.3e-54 184.9 0.4 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) PPTA PF01239.22 ORF3543 - 0.47 10.2 0.1 0.47 10.2 0.1 2.6 3 0 0 3 3 3 0 Protein prenyltransferase alpha subunit repeat CK_II_beta PF01214.18 ORF35026 - 2.4e-64 216.5 0.0 3.1e-64 216.1 0.0 1.1 1 0 0 1 1 1 1 Casein kinase II regulatory subunit TMEM151 PF14857.6 ORF34950 - 3.6e-06 26.2 0.3 4.5e-06 25.9 0.3 1.1 1 0 0 1 1 1 1 TMEM151 family Nop53 PF07767.11 ORF34950 - 0.0035 16.8 0.0 0.0044 16.5 0.0 1.2 1 0 0 1 1 1 1 Nop53 (60S ribosomal biogenesis) Scytalone_dh PF02982.14 ORF31667 - 0.016 15.0 0.1 0.023 14.5 0.1 1.2 1 0 0 1 1 1 0 Scytalone dehydratase Hexapep PF00132.24 ORF31076 - 2.3e-06 27.1 1.7 0.0021 17.7 0.2 3.3 3 1 0 4 4 4 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 ORF31076 - 0.059 13.1 0.9 7.5 6.4 0.1 2.6 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase KAR9 PF08580.10 ORF28188 - 0.063 11.8 0.1 0.08 11.5 0.1 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 ABC2_membrane PF01061.24 ORF26894 - 1.2e-37 129.4 12.6 1.8e-37 128.8 12.6 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 ORF26894 - 4.7e-06 26.0 13.2 4.7e-06 26.0 13.2 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein Homeodomain PF00046.29 ORF25404 - 3.3e-05 23.6 0.2 6.6e-05 22.7 0.2 1.5 1 0 0 1 1 1 1 Homeodomain Sad1_UNC PF07738.13 ORF25404 - 0.1 12.6 1.7 0.16 12.0 0.6 1.8 1 1 1 2 2 2 0 Sad1 / UNC-like C-terminal GST_C_3 PF14497.6 ORF23896 - 0.0011 19.1 0.0 0.0017 18.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GRAB PF10375.9 ORF22500 - 0.0073 16.1 0.7 0.018 14.9 0.7 1.7 1 0 0 1 1 1 1 GRIP-related Arf-binding domain Gal_Lectin PF02140.18 ORF20052 - 7.8 7.0 10.8 0.2 12.1 0.5 2.9 3 0 0 3 3 3 0 Galactose binding lectin domain Ribosomal_S6e PF01092.19 ORF18261 - 3.6e-56 188.5 0.1 3.6e-56 188.5 0.1 1.7 2 1 0 2 2 2 1 Ribosomal protein S6e DUF2992 PF11208.8 ORF18261 - 0.11 12.7 15.0 0.21 11.8 15.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) Polo_box_2 PF18531.1 ORF18261 - 0.14 12.3 0.4 0.44 10.7 0.0 1.9 2 1 0 2 2 2 0 Polo box domain CART PF06373.11 ORF152341 - 1.3 9.3 7.7 3.3 8.0 3.2 2.7 2 0 0 2 2 2 0 Cocaine and amphetamine regulated transcript protein (CART) SH3_12 PF18129.1 ORF15212 - 4.4e-12 45.9 0.2 7e-12 45.3 0.2 1.3 1 0 0 1 1 1 1 Xrn1 SH3-like domain SH3_13 PF18335.1 ORF15212 - 0.022 14.6 0.6 0.061 13.2 0.0 1.9 2 0 0 2 2 2 0 ATP-dependent RecD-like DNA helicase SH3 domain Smoothelin PF12510.8 ORF151897 - 2.1e-05 24.5 1.8 3.3e-05 23.8 0.2 2.3 2 0 0 2 2 2 1 Smoothelin cytoskeleton protein Nop25 PF09805.9 ORF151897 - 3.3 8.2 27.7 9 6.8 13.0 2.8 1 1 1 2 2 2 0 Nucleolar protein 12 (25kDa) LMBR1 PF04791.16 ORF151897 - 9.7 5.0 11.7 11 4.7 11.7 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein KAR9 PF08580.10 ORF147062 - 0.063 11.8 0.1 0.08 11.5 0.1 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 DUF1449 PF07290.11 ORF146706 - 0.59 9.7 4.7 2.2 7.9 4.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1449) TMEM154 PF15102.6 ORF146706 - 1 9.2 6.4 0.17 11.8 2.2 1.8 2 0 0 2 2 2 0 TMEM154 protein family Baculo_11_kDa PF06143.11 ORF146706 - 7 6.3 11.8 1.2 8.8 0.7 3.2 3 0 0 3 3 3 0 Baculovirus 11 kDa family RasGEF PF00617.19 ORF140073 - 0.26 11.5 1.2 0.36 11.0 0.5 1.5 1 1 1 2 2 2 0 RasGEF domain PARP PF00644.20 ORF138455 - 2.2e-18 66.6 1.7 8.7e-16 58.1 1.7 2.7 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain EF-hand_7 PF13499.6 ORF137325 - 0.07 13.6 0.0 0.17 12.4 0.0 1.7 1 0 0 1 1 1 0 EF-hand domain pair Hormone_3 PF00159.18 ORF137325 - 0.079 13.0 0.0 0.23 11.5 0.0 1.8 1 0 0 1 1 1 0 Pancreatic hormone peptide CSD PF00313.22 ORF137150 - 0.24 11.3 0.0 0.55 10.1 0.0 1.6 1 1 0 1 1 1 0 'Cold-shock' DNA-binding domain Cupin_8 PF13621.6 ORF136971 - 8.7e-28 97.7 0.0 9.3e-28 97.6 0.0 1.1 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 ORF136971 - 8e-05 22.3 0.0 0.017 14.6 0.0 2.1 2 0 0 2 2 2 2 Cupin superfamily protein JmjC PF02373.22 ORF136971 - 0.19 12.2 0.0 0.48 10.9 0.0 1.7 2 0 0 2 2 2 0 JmjC domain, hydroxylase AvrD PF05655.11 ORF136428 - 0.18 11.1 0.0 0.24 10.7 0.0 1.1 1 0 0 1 1 1 0 Pseudomonas avirulence D protein (AvrD) Fumarate_red_C PF02300.17 ORF136173 - 0.085 12.9 0.3 0.22 11.6 0.1 1.7 2 0 0 2 2 2 0 Fumarate reductase subunit C Herpes_LMP2 PF07415.11 ORF133819 - 4.2 6.0 15.6 0.2 10.4 2.2 2.3 2 1 1 3 3 3 0 Gammaherpesvirus latent membrane protein (LMP2) protein BTB PF00651.31 ORF13202 - 2.6e-22 79.1 2.6 1.4e-21 76.8 0.6 2.2 1 1 1 2 2 2 1 BTB/POZ domain Mito_carr PF00153.27 ORF13144 - 5.4e-49 164.1 2.1 2.1e-19 69.2 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein FAM176 PF14851.6 ORF13144 - 0.078 12.6 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 FAM176 family KAR9 PF08580.10 ORF13023 - 0.063 11.8 0.1 0.08 11.5 0.1 1.1 1 0 0 1 1 1 0 Yeast cortical protein KAR9 DUF1449 PF07290.11 ORF129506 - 0.59 9.7 4.7 2.2 7.9 4.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1449) TMEM154 PF15102.6 ORF129506 - 1 9.2 6.4 0.17 11.8 2.2 1.8 2 0 0 2 2 2 0 TMEM154 protein family Baculo_11_kDa PF06143.11 ORF129506 - 7 6.3 11.8 1.2 8.8 0.7 3.2 3 0 0 3 3 3 0 Baculovirus 11 kDa family bZIP_2 PF07716.15 ORF128785 - 1e-05 25.5 14.6 1e-05 25.5 14.6 1.9 2 0 0 2 2 2 1 Basic region leucine zipper bZIP_1 PF00170.21 ORF128785 - 7.4e-05 22.8 16.4 0.0003 20.8 16.4 2.1 1 0 0 1 1 1 1 bZIP transcription factor LMBR1 PF04791.16 ORF128785 - 4.2 6.2 10.6 5 5.9 10.6 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Neur_chan_memb PF02932.16 ORF128785 - 5.5 7.0 6.4 6.5 6.7 6.4 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region RED_C PF07807.11 ORF12696 - 0.052 14.0 0.8 0.052 14.0 0.8 2.2 1 1 1 2 2 2 0 RED-like protein C-terminal region MatE PF01554.18 ORF125250 - 0.00012 21.8 7.0 0.00012 21.8 7.0 1.6 1 1 0 1 1 1 1 MatE NAD_binding_1 PF00175.21 ORF125052 - 0.055 14.1 0.0 0.44 11.2 0.0 2.1 1 1 0 1 1 1 0 Oxidoreductase NAD-binding domain DEC-1_N PF04625.13 ORF12450 - 0.15 11.1 1.9 0.18 10.8 1.9 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region FumaraseC_C PF10415.9 ORF122669 - 0.032 14.6 0.3 0.11 12.9 0.0 2.0 2 0 0 2 2 2 0 Fumarase C C-terminus GREB1 PF15782.5 ORF122669 - 2.2 5.3 17.6 2.5 5.1 17.6 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer HSA PF07529.13 ORF122493 - 0.00074 19.8 6.0 1 9.7 0.5 3.7 3 0 0 3 3 3 3 HSA Phe_ZIP PF08916.11 ORF122493 - 0.0048 17.6 19.1 3.6 8.4 0.1 5.3 5 1 1 6 6 6 4 Phenylalanine zipper SIR2 PF02146.17 ORF120600 - 1.5e-30 106.4 0.0 1.8e-30 106.1 0.0 1.1 1 0 0 1 1 1 1 Sir2 family DUF1449 PF07290.11 ORF119784 - 0.59 9.7 4.7 2.2 7.9 4.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1449) TMEM154 PF15102.6 ORF119784 - 1 9.2 6.4 0.17 11.8 2.2 1.8 2 0 0 2 2 2 0 TMEM154 protein family Baculo_11_kDa PF06143.11 ORF119784 - 7 6.3 11.8 1.2 8.8 0.7 3.2 3 0 0 3 3 3 0 Baculovirus 11 kDa family Fer4_5 PF12801.7 ORF119296 - 8.7e-16 57.6 8.1 1.5e-12 47.2 0.3 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_10 PF13237.6 ORF119296 - 4.7e-07 29.8 10.7 4.7e-07 29.8 10.7 3.2 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF119296 - 1e-06 28.8 24.4 0.00022 21.3 14.1 3.3 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4 PF00037.27 ORF119296 - 2.2e-06 27.3 24.3 0.0065 16.2 1.7 4.7 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 ORF119296 - 2.7e-05 24.0 12.3 5.4e-05 23.1 2.9 4.6 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_21 PF14697.6 ORF119296 - 6.4e-05 23.0 9.0 6.4e-05 23.0 9.0 3.6 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 ORF119296 - 0.0002 21.9 24.7 0.0096 16.5 3.5 3.3 2 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF119296 - 0.00053 20.9 18.3 0.47 11.4 1.1 4.2 4 1 0 4 4 4 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 ORF119296 - 0.0098 15.9 3.5 0.0098 15.9 3.5 4.4 5 0 0 5 5 4 2 4Fe-4S binding domain Cdd1 PF11731.8 ORF119296 - 0.018 15.3 0.3 0.034 14.4 0.3 1.4 1 0 0 1 1 1 0 Pathogenicity locus Ni_hydr_CYTB PF01292.20 ORF119296 - 0.027 14.1 1.9 0.041 13.5 1.9 1.2 1 0 0 1 1 1 0 Prokaryotic cytochrome b561 Fer4_15 PF13459.6 ORF119296 - 3.5 8.4 10.9 2.2 9.1 0.9 2.8 3 0 0 3 3 3 0 4Fe-4S single cluster domain DUF4464 PF14713.6 ORF117567 - 3.2e-82 275.4 4.8 3.6e-82 275.3 4.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4464) Pro_isomerase PF00160.21 ORF117439 - 1.5e-48 165.1 0.1 1.8e-48 164.8 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Snf7 PF03357.21 ORF114338 - 1.4e-20 73.6 6.8 1.7e-20 73.3 6.8 1.1 1 0 0 1 1 1 1 Snf7 MetJ PF01340.20 ORF111468 - 0.0067 16.4 0.1 0.04 13.9 0.0 2.0 2 0 0 2 2 2 1 Met Apo-repressor, MetJ Spore_III_AE PF09546.10 ORF111468 - 0.25 10.5 0.8 0.33 10.1 0.1 1.5 2 0 0 2 2 2 0 Stage III sporulation protein AE (spore_III_AE) DUF5611 PF18446.1 ORF111468 - 0.65 10.9 5.7 0.34 11.8 1.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF5611) Linker_histone PF00538.19 ORF111056 - 1.2e-08 35.2 1.7 1.2e-08 35.2 1.7 2.7 2 1 1 3 3 3 1 linker histone H1 and H5 family DUF572 PF04502.13 ORF111056 - 2.3 7.8 30.9 3 7.4 30.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF572) Ndc1_Nup PF09531.10 ORF111056 - 4.9 5.7 18.1 5.8 5.5 18.1 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup WD40 PF00400.32 ORF107834 - 1.1e-12 48.2 1.0 0.074 14.0 0.1 5.2 5 0 0 5 5 5 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF107834 - 3.5e-05 24.0 0.0 4.4 7.7 0.0 3.4 2 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain GST_C_3 PF14497.6 ORF107230 - 0.0011 19.1 0.0 0.0017 18.5 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Ax_dynein_light PF10211.9 ORF105803 - 3.4e-72 242.3 12.0 4e-72 242.1 12.0 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain Phage_TAC_4 PF08748.11 ORF105803 - 0.011 16.1 3.1 0.02 15.2 3.1 1.4 1 0 0 1 1 1 0 Phage tail assembly chaperone APG6_N PF17675.1 ORF105803 - 0.015 15.9 12.6 0.015 15.9 12.6 1.8 2 0 0 2 2 2 0 Apg6 coiled-coil region Mei5 PF10376.9 ORF105803 - 0.028 14.3 12.8 0.039 13.8 12.7 1.3 1 1 0 1 1 1 0 Double-strand recombination repair protein bZIP_1 PF00170.21 ORF105803 - 0.039 14.1 6.7 0.1 12.7 6.7 1.7 1 0 0 1 1 1 0 bZIP transcription factor DivIC PF04977.15 ORF105803 - 0.57 10.0 10.8 0.099 12.4 5.4 2.4 1 1 1 2 2 2 0 Septum formation initiator YabA PF06156.13 ORF105803 - 1.2 9.9 10.7 1.2 9.8 9.3 1.8 1 1 0 1 1 1 0 Initiation control protein YabA Sirohm_synth_M PF14824.6 ORF105803 - 1.2 8.7 3.0 0.98 8.9 0.3 2.2 2 0 0 2 2 2 0 Sirohaem biosynthesis protein central ERM PF00769.19 ORF105803 - 2.3 7.9 18.2 3.4 7.4 18.2 1.4 1 1 0 1 1 1 0 Ezrin/radixin/moesin family DUF724 PF05266.14 ORF105803 - 6 6.6 14.0 3.5 7.4 11.4 1.7 1 1 0 2 2 2 0 Protein of unknown function (DUF724) Ank_4 PF13637.6 ORF105768 - 5.5e-07 30.0 0.2 3 8.5 0.0 4.5 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 ORF105768 - 2.6e-06 27.9 0.0 0.38 11.4 0.0 3.4 3 1 0 3 3 3 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 ORF105768 - 7.3e-06 25.9 0.2 3.8 8.4 0.0 4.6 5 0 0 5 5 5 2 Ankyrin repeat Ank_5 PF13857.6 ORF105768 - 0.00026 21.2 1.3 0.45 10.9 0.0 3.8 3 1 0 3 3 3 2 Ankyrin repeats (many copies) GspH PF12019.8 ORF102559 - 1.6e-09 38.1 0.1 2.8e-09 37.3 0.1 1.4 1 0 0 1 1 1 1 Type II transport protein GspH N_methyl PF07963.12 ORF102559 - 4.9e-06 25.9 2.8 9.8e-06 24.9 2.8 1.5 1 0 0 1 1 1 1 Prokaryotic N-terminal methylation motif Methyltransf_29 PF03141.16 ORF101227 - 0.0003 19.5 1.7 1.7 7.1 0.0 3.7 3 1 0 3 3 3 3 Putative S-adenosyl-L-methionine-dependent methyltransferase Spectrin PF00435.21 ORF101227 - 0.012 16.1 0.0 60 4.2 0.0 3.8 4 0 0 4 4 4 0 Spectrin repeat RCC1_2 PF13540.6 ORF101227 - 0.29 11.0 11.6 8.6 6.3 0.7 4.5 5 0 0 5 5 5 0 Regulator of chromosome condensation (RCC1) repeat DNA_topoisoIV PF00521.20 ORF100769 - 0.032 13.1 7.5 0.042 12.7 7.5 1.2 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A EFG_II PF14492.6 NODE_30684_length_709_cov_4.271513_g24272_i0reverse_frame_1 - 1.1e-34 118.4 0.0 1.6e-34 117.8 0.0 1.3 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_IV PF03764.18 NODE_30684_length_709_cov_4.271513_g24272_i0reverse_frame_1 - 1.1e-31 109.1 0.2 2.1e-31 108.2 0.2 1.4 1 0 0 1 1 1 1 Elongation factor G, domain IV GTP_EFTU_D2 PF03144.25 NODE_30684_length_709_cov_4.271513_g24272_i0reverse_frame_1 - 4.8e-11 42.9 0.3 1.1e-10 41.8 0.3 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 NODE_30684_length_709_cov_4.271513_g24272_i0reverse_frame_1 - 1.8e-07 31.0 0.0 2.9e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain Myc_target_1 PF15179.6 NODE_30672_length_709_cov_101.078635_g24262_i0reverse_frame_1 - 0.01 15.8 1.6 0.014 15.3 1.6 1.2 1 0 0 1 1 1 0 Myc target protein 1 Stc1 PF12898.7 NODE_30672_length_709_cov_101.078635_g24262_i0reverse_frame_1 - 0.37 11.4 9.8 0.7 10.5 9.8 1.4 1 0 0 1 1 1 0 Stc1 domain HTS PF04204.16 NODE_30671_length_709_cov_103.728487_g24261_i0forward_frame_1 - 0.11 11.5 0.9 0.18 10.7 0.9 1.3 1 0 0 1 1 1 0 Homoserine O-succinyltransferase HSP70 PF00012.20 NODE_30647_length_710_cov_70.411852_g24240_i0forward_frame_1 - 6.4 4.8 22.3 8.2 4.5 22.3 1.2 1 0 0 1 1 1 0 Hsp70 protein AGTRAP PF06396.11 NODE_30646_length_710_cov_72.642963_g24239_i0reverse_frame_1 - 0.065 13.0 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Angiotensin II, type I receptor-associated protein (AGTRAP) HTH_45 PF14947.6 NODE_30622_length_710_cov_446.245926_g24216_i0forward_frame_1 - 0.09 12.8 0.2 1.5 8.9 0.3 2.6 3 0 0 3 3 3 0 Winged helix-turn-helix PSII_Pbs31 PF18240.1 NODE_30613_length_710_cov_5189.773333_g23304_i2reverse_frame_1 - 1.1e-07 32.2 0.1 8.7e-07 29.3 0.0 2.3 2 0 0 2 2 2 1 Photosystem II Psb31 protein CytB6-F_Fe-S PF08802.10 NODE_30613_length_710_cov_5189.773333_g23304_i2reverse_frame_1 - 0.36 10.9 4.8 10 6.3 1.0 2.3 1 1 1 2 2 2 0 Cytochrome B6-F complex Fe-S subunit CBM46 PF18448.1 NODE_30613_length_710_cov_5189.773333_g23304_i2forward_frame_1 - 0.059 13.7 2.1 4.2 7.7 0.2 2.6 1 1 2 3 3 3 0 Carbohydrate binding domain DUF4186 PF13811.6 NODE_30521_length_713_cov_83.705015_g24128_i0reverse_frame_3 - 0.049 13.7 0.1 0.08 13.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4186) Stanniocalcin PF03298.13 NODE_30511_length_713_cov_131.837758_g24118_i0reverse_frame_2 - 0.074 12.4 1.5 0.12 11.7 1.5 1.2 1 0 0 1 1 1 0 Stanniocalcin family Megourin PF17560.2 NODE_30490_length_713_cov_813.060472_g24101_i0reverse_frame_3 - 0.23 11.7 2.4 0.41 10.9 2.4 1.4 1 0 0 1 1 1 0 Aphid Megourins FlhE PF06366.13 NODE_30490_length_713_cov_813.060472_g24101_i0forward_frame_2 - 0.0072 16.3 0.1 0.011 15.7 0.1 1.3 1 0 0 1 1 1 1 Flagellar protein FlhE Ribosomal_L44 PF00935.19 NODE_30487_length_713_cov_1247.746313_g23480_i1reverse_frame_3 - 3.6e-26 91.5 12.6 3.6e-26 91.5 12.6 1.6 1 1 1 2 2 2 1 Ribosomal protein L44 Pkinase PF00069.25 NODE_30468_length_714_cov_69.157585_g24088_i0forward_frame_3 - 0.001 18.5 0.2 0.0022 17.4 0.1 1.6 1 1 0 2 2 2 1 Protein kinase domain APH PF01636.23 NODE_30468_length_714_cov_69.157585_g24088_i0forward_frame_3 - 0.061 13.2 0.0 0.092 12.7 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family NEMP PF10225.9 NODE_30449_length_714_cov_221.536082_g23862_i1reverse_frame_3 - 0.026 14.2 0.0 0.043 13.5 0.0 1.4 1 0 0 1 1 1 0 NEMP family DUF3146 PF11344.8 NODE_30449_length_714_cov_221.536082_g23862_i1reverse_frame_3 - 0.032 13.9 0.2 0.054 13.2 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3146) TYW3 PF02676.14 NODE_30449_length_714_cov_221.536082_g23862_i1forward_frame_3 - 0.076 12.4 0.1 0.12 11.7 0.1 1.3 1 0 0 1 1 1 0 Methyltransferase TYW3 DUF3854 PF12965.7 NODE_30428_length_714_cov_24938.530191_g23263_i15reverse_frame_3 - 0.092 12.7 0.0 0.25 11.3 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3854) Bac_DnaA_C PF08299.11 NODE_30428_length_714_cov_24938.530191_g23263_i15reverse_frame_2 - 0.077 13.0 0.0 0.2 11.7 0.0 1.7 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix DUF3854 PF12965.7 NODE_30427_length_714_cov_24938.530191_g23263_i14reverse_frame_3 - 0.088 12.8 0.0 0.25 11.3 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3854) DUF4296 PF14129.6 NODE_30427_length_714_cov_24938.530191_g23263_i14reverse_frame_2 - 0.0063 17.1 0.3 0.012 16.2 0.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4296) Bac_DnaA_C PF08299.11 NODE_30427_length_714_cov_24938.530191_g23263_i14reverse_frame_2 - 0.066 13.2 0.0 0.2 11.7 0.0 1.8 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix DUF3854 PF12965.7 NODE_30426_length_714_cov_24938.543446_g23263_i13reverse_frame_3 - 0.088 12.8 0.0 0.25 11.3 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF3854) DUF4296 PF14129.6 NODE_30426_length_714_cov_24938.543446_g23263_i13reverse_frame_2 - 0.034 14.7 0.7 0.065 13.8 0.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4296) Bac_DnaA_C PF08299.11 NODE_30426_length_714_cov_24938.543446_g23263_i13reverse_frame_2 - 0.084 12.9 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial dnaA protein helix-turn-helix Rhomboid_N PF12122.8 ORF99358 - 0.11 12.6 0.3 0.23 11.7 0.3 1.5 1 0 0 1 1 1 0 Cytoplasmic N-terminal domain of rhomboid serine protease Mrx7 PF10906.8 ORF99268 - 0.028 14.7 0.1 0.055 13.7 0.1 1.6 1 0 0 1 1 1 0 MIOREX complex component 7 Arf PF00025.21 ORF98406 - 2.5e-75 251.8 0.1 3e-75 251.5 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF98406 - 4.9e-14 52.6 0.0 6.9e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF98406 - 8.2e-13 48.3 0.0 1e-12 47.9 0.0 1.1 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF98406 - 9e-13 48.0 0.0 1.2e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF98406 - 4.4e-10 39.3 0.3 1.9e-07 30.6 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF98406 - 7.3e-10 38.6 0.0 9.4e-10 38.2 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF98406 - 2.8e-05 24.1 0.0 4.6e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF98406 - 0.028 14.6 0.0 0.064 13.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF98406 - 0.079 12.3 0.1 0.13 11.6 0.1 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase DUF1580 PF07618.11 ORF91279 - 0.11 12.2 1.6 0.15 11.7 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1580) PPR_2 PF13041.6 ORF90598 - 3.5e-20 71.9 0.0 5.8e-07 29.6 0.0 4.4 1 1 4 5 5 5 4 PPR repeat family PPR_3 PF13812.6 ORF90598 - 2.9e-16 59.3 0.0 2.8e-06 27.3 0.0 3.9 2 1 1 4 4 4 3 Pentatricopeptide repeat domain PPR PF01535.20 ORF90598 - 4.6e-16 57.9 0.9 0.0068 16.6 0.0 5.8 6 0 0 6 6 6 4 PPR repeat PPR_long PF17177.4 ORF90598 - 1.9e-10 40.4 1.1 6.6e-06 25.6 0.1 2.4 1 1 1 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 ORF90598 - 8.8e-06 25.3 0.4 2.7 7.8 0.0 5.5 8 1 0 8 8 8 2 PPR repeat SNAP PF14938.6 ORF90598 - 0.003 17.0 1.9 1.1 8.6 0.1 2.3 2 0 0 2 2 2 2 Soluble NSF attachment protein, SNAP TPR_7 PF13176.6 ORF90598 - 0.0051 16.7 0.1 30 4.9 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 ORF90598 - 0.026 15.3 2.8 18 6.4 0.0 3.8 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF3322 PF11795.8 ORF90598 - 0.047 13.7 1.8 1.5 8.8 0.1 2.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) HemY_N PF07219.13 ORF90598 - 0.083 13.1 0.1 0.083 13.1 0.1 1.9 2 0 0 2 2 2 0 HemY protein N-terminus DUF3040 PF11239.8 ORF85041 - 0.47 10.8 1.9 1.8 8.9 0.3 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3040) Homeodomain PF00046.29 ORF83972 - 4.7e-05 23.2 1.7 0.00018 21.3 0.3 2.4 2 0 0 2 2 2 1 Homeodomain zf-primase PF09329.11 ORF8373 - 0.026 14.3 0.2 6 6.8 0.1 2.4 2 0 0 2 2 2 0 Primase zinc finger Phostensin_N PF13916.6 ORF8373 - 0.076 13.4 0.0 0.47 10.8 0.0 2.1 1 1 1 2 2 2 0 PP1-regulatory protein, Phostensin N-terminal AMP-binding PF00501.28 ORF81935 - 0.069 11.7 0.1 0.089 11.4 0.1 1.1 1 0 0 1 1 1 0 AMP-binding enzyme V-set_CD47 PF08204.11 ORF8181 - 0.022 14.7 0.0 0.035 14.1 0.0 1.2 1 0 0 1 1 1 0 CD47 immunoglobulin-like domain zf-Di19 PF05605.12 ORF8181 - 0.081 13.2 0.5 0.081 13.2 0.5 2.7 3 1 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding KH_1 PF00013.29 ORF79764 - 1.6e-20 72.7 1.6 3.6e-12 45.9 0.1 2.2 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 ORF79764 - 0.0019 18.0 1.0 0.0044 16.8 1.0 1.7 1 0 0 1 1 1 1 KH domain DUF484 PF04340.12 ORF79764 - 0.12 12.0 0.1 3.5 7.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function, DUF484 VasL PF12486.8 ORF77440 - 0.052 13.4 0.2 0.14 12.0 0.1 1.7 1 1 0 1 1 1 0 Type VI secretion system, EvfB, or VasL DUF1970 PF09301.10 ORF77440 - 0.1 12.8 0.8 0.16 12.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1970) TMC PF07810.13 ORF75974 - 6.6e-08 33.1 2.9 6.6e-08 33.1 2.9 2.6 3 1 0 3 3 3 1 TMC domain PHO4 PF01384.20 ORF75974 - 0.051 12.6 0.5 0.075 12.1 0.5 1.4 1 0 0 1 1 1 0 Phosphate transporter family Gemini_mov PF01708.16 ORF75974 - 7.1 6.5 10.2 40 4.1 0.0 3.1 2 1 1 3 3 3 0 Geminivirus putative movement protein CPBP PF02517.16 ORF75791 - 0.0023 18.3 7.2 0.0023 18.3 7.2 2.6 2 2 0 2 2 2 1 CPBP intramembrane metalloprotease DUF4191 PF13829.6 ORF72006 - 2.1 7.6 7.6 2.9 7.2 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) Trypan_PARP PF05887.11 ORF71865 - 3.3 7.7 10.6 3.4 7.7 7.3 2.1 2 1 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) DUF1353 PF07087.11 ORF70833 - 0.12 12.1 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1353) Glycos_transf_4 PF00953.21 ORF6310 - 4.2e-06 26.8 1.3 4.2e-06 26.8 1.3 2.3 2 1 0 2 2 2 1 Glycosyl transferase family 4 VIT1 PF01988.19 ORF6310 - 0.0012 18.8 0.0 0.0019 18.1 0.0 1.3 1 1 0 1 1 1 1 VIT family SHIPPO-rpt PF07004.12 ORF6176 - 1.1e-07 32.4 41.7 0.011 16.6 0.6 7.3 7 1 0 7 7 7 4 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF6176 - 3 7.2 5.5 2.2 7.6 0.3 2.6 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal SHIPPO-rpt PF07004.12 ORF59105 - 1.1e-07 32.4 41.7 0.011 16.6 0.6 7.3 7 1 0 7 7 7 4 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF59105 - 3 7.2 5.5 2.2 7.6 0.3 2.6 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal Ezh2_MCSS PF18600.1 ORF56134 - 0.38 10.4 3.6 2.9 7.6 3.6 2.3 1 1 0 1 1 1 0 MCSS domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks91.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks91.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks91.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks91.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:30:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DHHC PF01529.20 ORF5581 - 2.4e-24 86.0 11.5 2.4e-24 86.0 11.5 2.3 2 0 0 2 2 2 1 DHHC palmitoyltransferase PNP_UDP_1 PF01048.20 ORF5198 - 3.6e-13 49.3 0.0 4.3e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily BAR_3 PF16746.5 ORF5198 - 0.027 14.2 0.1 0.055 13.2 0.1 1.5 1 0 0 1 1 1 0 BAR domain of APPL family CUE PF02845.16 ORF51941 - 7.1e-08 32.0 0.1 1.2e-07 31.3 0.1 1.4 1 0 0 1 1 1 1 CUE domain BUD22 PF09073.10 ORF51941 - 0.013 14.9 21.9 0.015 14.6 21.9 1.1 1 0 0 1 1 1 0 BUD22 DUF2457 PF10446.9 ORF51941 - 0.12 11.5 23.9 0.17 11.0 23.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) RPN2_C PF18004.1 ORF51941 - 2.9 7.8 18.2 1.3 9.0 7.4 2.3 2 0 0 2 2 2 0 26S proteasome regulatory subunit RPN2 C-terminal domain LAP1C PF05609.12 ORF51941 - 2.9 6.9 19.9 3.8 6.5 19.9 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) SHIPPO-rpt PF07004.12 ORF4864 - 1.1e-07 32.4 41.7 0.011 16.6 0.6 7.3 7 1 0 7 7 7 4 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF4864 - 3 7.2 5.5 2.2 7.6 0.3 2.6 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal mTERF PF02536.14 ORF4511 - 0.043 12.7 0.1 0.086 11.8 0.0 1.4 2 0 0 2 2 2 0 mTERF Trypan_PARP PF05887.11 ORF438 - 3.3 7.7 10.6 3.4 7.7 7.3 2.1 2 1 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) DDE_1 PF03184.19 ORF41003 - 2e-12 47.1 0.0 2.5e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DDE_1 PF03184.19 ORF40968 - 2e-12 47.1 0.0 2.5e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF3390 PF11870.8 ORF39613 - 0.11 12.9 5.2 2.5 8.5 0.1 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3390) Ezh2_MCSS PF18600.1 ORF39263 - 0.38 10.4 3.6 2.9 7.6 3.6 2.3 1 1 0 1 1 1 0 MCSS domain CID_GANP PF16766.5 ORF38472 - 0.042 14.1 0.1 0.099 12.9 0.1 1.6 1 0 0 1 1 1 0 Binding region of GANP to ENY2 SHIPPO-rpt PF07004.12 ORF35883 - 1.1e-07 32.4 41.7 0.011 16.6 0.6 7.3 7 1 0 7 7 7 4 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF35883 - 3 7.2 5.5 2.2 7.6 0.3 2.6 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal Spc24 PF08286.11 ORF35553 - 0.044 14.0 1.3 0.044 14.0 1.3 2.6 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 Cnn_1N PF07989.11 ORF35553 - 1.8 8.8 9.1 0.19 11.9 4.0 2.1 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 TraI_2_C PF07515.11 ORF35553 - 1.8 8.6 6.4 0.31 11.0 1.1 2.3 2 1 0 2 2 2 0 Putative conjugal transfer nickase/helicase TraI C-term Tmemb_cc2 PF10267.9 ORF35553 - 4.3 6.4 23.7 0.045 12.9 6.6 2.1 1 1 1 2 2 2 0 Predicted transmembrane and coiled-coil 2 protein SPATA1_C PF15743.5 ORF35553 - 4.9 7.2 15.8 0.18 11.9 8.1 2.3 2 1 0 2 2 2 0 Spermatogenesis-associated C-terminus CENP-H PF05837.12 ORF35553 - 6.3 7.3 13.5 1.8 9.0 6.9 2.4 2 0 0 2 2 2 0 Centromere protein H (CENP-H) DASH_Hsk3 PF08227.11 ORF35553 - 7 7.1 8.1 0.96 9.9 0.4 2.7 3 0 0 3 3 3 0 DASH complex subunit Hsk3 like AC_N PF16214.5 ORF34476 - 0.11 11.7 3.4 0.13 11.4 3.4 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Syntaxin PF00804.25 ORF34476 - 0.8 9.3 5.2 0.44 10.2 2.8 1.7 1 1 1 2 2 2 0 Syntaxin AstE_AspA PF04952.14 ORF29354 - 1e-09 37.9 0.0 0.00042 19.5 0.0 2.1 2 0 0 2 2 2 2 Succinylglutamate desuccinylase / Aspartoacylase family DUF4681 PF15732.5 ORF2874 - 0.15 12.3 0.2 0.25 11.6 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4681) AGA2 PF17366.2 ORF28497 - 0.075 12.7 1.3 3.2 7.5 0.0 3.5 4 0 0 4 4 4 0 A-agglutinin-binding subunit Aga2 RuBisCo_chap_C PF18087.1 ORF28497 - 0.14 11.9 2.9 3.6 7.3 0.2 2.9 3 0 0 3 3 3 0 Rubisco Assembly chaperone C-terminal domain V_ATPase_I PF01496.19 ORF26496 - 8.7e-81 272.0 0.7 9.7e-81 271.9 0.7 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family LRR19-TM PF15176.6 ORF26496 - 0.015 15.3 0.0 0.031 14.3 0.0 1.5 1 0 0 1 1 1 0 Leucine-rich repeat family 19 TM domain CCDC53 PF10152.9 ORF18949 - 0.025 15.0 0.4 0.063 13.7 0.4 1.7 1 1 0 1 1 1 0 Subunit CCDC53 of WASH complex APG5 PF04106.12 ORF152176 - 0.077 12.6 2.9 0.09 12.3 2.1 1.4 1 1 0 1 1 1 0 Autophagy protein Apg5 zf-CCCH PF00642.24 ORF147349 - 2.9e-06 27.0 2.6 2.9e-06 27.0 2.6 1.9 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 ORF147349 - 4.5e-05 23.1 4.5 4.5e-05 23.1 4.5 2.0 2 0 0 2 2 2 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 ORF147349 - 0.003 17.6 6.9 0.0067 16.4 6.9 1.6 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 ORF147349 - 0.025 15.3 0.2 0.054 14.2 0.2 1.5 1 0 0 1 1 1 0 Torus domain zf-CCCH_3 PF15663.5 ORF147349 - 0.26 11.5 1.6 0.44 10.8 1.6 1.4 1 0 0 1 1 1 0 Zinc-finger containing family Neurokinin_B PF03823.14 ORF146770 - 1.7 8.7 4.4 1.4 9.0 0.7 2.6 2 1 1 3 3 3 0 Neurokinin B Trypan_PARP PF05887.11 ORF145414 - 3.3 7.7 10.6 3.4 7.7 7.3 2.1 2 1 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) BBE PF08031.12 ORF139597 - 1.4e-05 25.1 0.0 2.6e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Berberine and berberine like Golgin_A5 PF09787.9 ORF135818 - 0.026 14.0 3.3 0.035 13.6 3.3 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 CENP-F_leu_zip PF10473.9 ORF135818 - 0.44 10.6 8.0 1.4 9.0 4.1 2.5 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ADIP PF11559.8 ORF135818 - 3.2 7.8 11.0 0.41 10.7 6.2 1.9 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding Abhydrolase_3 PF07859.13 ORF132405 - 5.4e-41 140.8 0.0 6.3e-41 140.6 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 ORF132405 - 6.1e-10 38.5 0.0 1.2e-09 37.6 0.0 1.4 1 1 0 1 1 1 1 Steryl acetyl hydrolase Hydrolase_4 PF12146.8 ORF132405 - 0.00047 19.5 0.0 0.00065 19.0 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2974 PF11187.8 ORF132405 - 0.0064 16.1 0.0 0.012 15.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) Thioesterase PF00975.20 ORF132405 - 0.0096 16.1 0.0 0.015 15.4 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_6 PF12697.7 ORF132405 - 0.0096 16.5 0.1 0.011 16.3 0.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 ORF132405 - 0.044 13.4 0.0 0.062 12.9 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold CSD PF00313.22 ORF131244 - 0.0011 18.8 0.1 0.0017 18.1 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain GREB1 PF15782.5 ORF131244 - 0.096 9.8 16.6 0.1 9.7 16.6 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer CDC45 PF02724.14 ORF131244 - 7.6 4.7 32.9 0.053 11.8 23.3 1.9 2 0 0 2 2 2 0 CDC45-like protein RR_TM4-6 PF06459.12 ORF131244 - 7.7 6.3 23.2 0.17 11.7 15.4 1.8 2 0 0 2 2 2 0 Ryanodine Receptor TM 4-6 MORN PF02493.20 ORF130770 - 9.3e-08 31.5 18.8 0.0017 18.1 0.0 4.9 5 0 0 5 5 5 3 MORN repeat DUF1280 PF06918.14 ORF130770 - 0.016 14.8 0.1 0.021 14.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1280) Peptidase_M22 PF00814.25 ORF129647 - 4.5e-40 138.1 0.0 5.6e-40 137.7 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family Carbam_trans_N PF02543.15 ORF129647 - 0.00022 21.0 0.0 0.00028 20.7 0.0 1.1 1 0 0 1 1 1 1 Carbamoyltransferase N-terminus DDE_Tnp_Tn3 PF01526.17 ORF129647 - 0.0094 14.8 0.0 0.013 14.4 0.0 1.1 1 0 0 1 1 1 1 Tn3 transposase DDE domain DUF4112 PF13430.6 ORF129321 - 0.02 15.2 0.0 0.031 14.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4112) zf-U1 PF06220.12 ORF122159 - 0.012 15.3 0.2 0.012 15.3 0.2 2.2 2 0 0 2 2 2 0 U1 zinc finger Mtc PF03820.17 ORF120541 - 1.6e-60 204.8 7.0 1.7e-60 204.7 7.0 1.0 1 0 0 1 1 1 1 Tricarboxylate carrier gag-asp_proteas PF13975.6 ORF120541 - 0.14 12.8 0.1 0.3 11.7 0.1 1.6 1 1 0 1 1 1 0 gag-polyprotein putative aspartyl protease Zip PF02535.22 ORF119219 - 0.0069 15.7 0.3 0.0076 15.5 0.3 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter CobT PF06213.12 ORF119219 - 0.022 14.2 4.0 0.03 13.7 4.0 1.2 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Trypan_PARP PF05887.11 ORF119219 - 4.8 7.2 10.5 7.3 6.6 10.5 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) EF-hand_7 PF13499.6 ORF118184 - 1.7e-08 34.8 9.1 2.3e-06 27.9 4.6 2.1 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF118184 - 4.8e-07 29.2 7.6 0.00072 19.3 0.3 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF118184 - 2e-06 27.0 3.2 5.2e-06 25.7 0.4 2.6 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF118184 - 2.6e-05 23.4 7.7 3.2e-05 23.2 0.3 2.8 3 0 0 3 3 3 1 EF hand EF-hand_8 PF13833.6 ORF118184 - 0.0028 17.5 4.4 0.47 10.3 0.3 2.9 2 0 0 2 2 2 2 EF-hand domain pair SH3_16 PF18348.1 ORF118184 - 0.024 14.4 0.0 1.2 9.0 0.1 2.6 2 0 0 2 2 2 0 Bacterial dipeptidyl-peptidase Sh3 domain CID_GANP PF16766.5 ORF118052 - 0.042 14.1 0.1 0.099 12.9 0.1 1.6 1 0 0 1 1 1 0 Binding region of GANP to ENY2 DPBB_1 PF03330.18 ORF117090 - 0.0059 16.9 0.1 0.014 15.6 0.1 1.7 1 1 0 1 1 1 1 Lytic transglycolase Barwin PF00967.17 ORF117090 - 0.0075 16.1 0.2 0.02 14.7 0.2 1.7 1 0 0 1 1 1 1 Barwin family Trypan_PARP PF05887.11 ORF116863 - 3.3 7.7 10.6 3.4 7.7 7.3 2.1 2 1 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) DPBB_1 PF03330.18 ORF113912 - 0.0059 16.9 0.1 0.014 15.6 0.1 1.7 1 1 0 1 1 1 1 Lytic transglycolase Barwin PF00967.17 ORF113912 - 0.0075 16.1 0.2 0.02 14.7 0.2 1.7 1 0 0 1 1 1 1 Barwin family Trypan_PARP PF05887.11 ORF113765 - 3.3 7.7 10.6 3.4 7.7 7.3 2.1 2 1 0 2 2 2 0 Procyclic acidic repetitive protein (PARP) VASP_tetra PF08776.11 ORF111073 - 0.28 10.8 4.1 0.65 9.6 4.1 1.6 1 0 0 1 1 1 0 VASP tetramerisation domain EFhand_Ca_insen PF08726.10 ORF111073 - 6.3 7.0 8.9 5 7.3 3.0 2.4 2 0 0 2 2 2 0 Ca2+ insensitive EF hand EF-hand_1 PF00036.32 ORF110454 - 0.00012 21.4 2.3 0.00012 21.4 2.3 2.0 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF110454 - 0.00014 21.6 1.0 0.00039 20.1 1.0 1.8 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 ORF110454 - 0.00046 20.0 0.3 0.0014 18.4 0.3 1.9 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_7 PF13499.6 ORF110454 - 0.0014 19.0 1.8 0.0026 18.2 1.1 1.9 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF110454 - 0.018 14.5 3.0 0.018 14.5 3.0 2.0 2 0 0 2 2 2 0 EF hand Lipoprotein_20 PF13942.6 ORF109611 - 4.6e-77 257.9 7.7 5.6e-77 257.6 7.7 1.1 1 0 0 1 1 1 1 YfhG lipoprotein CCDC144C PF14915.6 ORF109611 - 0.0095 15.1 3.5 0.012 14.7 3.5 1.1 1 0 0 1 1 1 1 CCDC144C protein coiled-coil region ZapA PF05164.13 ORF109611 - 0.057 13.9 2.0 0.7 10.4 0.0 2.3 2 0 0 2 2 2 0 Cell division protein ZapA KfrA_N PF11740.8 ORF109611 - 0.061 14.0 5.4 0.12 13.1 5.4 1.4 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term DUF5320 PF17253.2 ORF109611 - 0.37 11.9 1.3 0.8 10.8 1.3 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5320) SlyX PF04102.12 ORF109611 - 3.5 8.3 11.2 2.4 8.8 2.0 2.7 1 1 1 2 2 2 0 SlyX PMP22_Claudin PF00822.20 ORF108681 - 0.03 14.2 0.8 0.03 14.2 0.8 2.7 2 1 0 2 2 2 0 PMP-22/EMP/MP20/Claudin family Phage_holin_1 PF04531.13 ORF108681 - 0.19 12.3 14.5 0.77 10.3 2.0 3.1 2 1 1 3 3 3 0 Bacteriophage holin Claudin_2 PF13903.6 ORF108681 - 0.26 11.0 11.6 1.8 8.3 1.3 3.1 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction DUF202 PF02656.15 ORF108681 - 1.1 9.8 5.9 1.4 9.4 3.5 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF202) ATP-synt_DE_N PF02823.16 ORF10525 - 9.9e-23 79.9 0.0 1.7e-22 79.1 0.0 1.4 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ATP-synt_DE PF00401.20 ORF10525 - 4.5e-07 30.0 5.7 9.9e-07 28.9 5.7 1.6 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DUF5547 PF17701.1 ORF10525 - 0.004 17.0 0.1 0.006 16.4 0.1 1.3 1 0 0 1 1 1 1 Family of unknown function (DUF5547) Leu_Phe_trans PF03588.14 ORF100402 - 0.014 15.0 0.3 0.025 14.1 0.3 1.4 1 0 0 1 1 1 0 Leucyl/phenylalanyl-tRNA protein transferase Aldolase PF01081.19 NODE_30686_length_709_cov_2.345697_g24274_i0reverse_frame_2 - 1e-48 165.3 4.2 1.3e-48 165.0 4.2 1.1 1 0 0 1 1 1 1 KDPG and KHG aldolase ILVD_EDD PF00920.21 NODE_30686_length_709_cov_2.345697_g24274_i0reverse_frame_2 - 1.9e-22 79.6 1.0 4.7e-22 78.3 0.1 1.8 2 0 0 2 2 2 1 Dehydratase family HMGL-like PF00682.19 NODE_30686_length_709_cov_2.345697_g24274_i0reverse_frame_2 - 0.012 15.1 0.3 0.019 14.5 0.3 1.2 1 0 0 1 1 1 0 HMGL-like DUF1181 PF06680.11 NODE_30612_length_710_cov_8682.645926_g24208_i0forward_frame_3 - 0.0089 15.8 1.0 0.0089 15.8 1.0 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF1181) HIRAN PF08797.11 NODE_30611_length_710_cov_59204.733333_g10629_i2reverse_frame_2 - 0.043 13.7 0.0 7.6 6.5 0.0 2.8 3 0 0 3 3 3 0 HIRAN domain p450 PF00067.22 NODE_30611_length_710_cov_59204.733333_g10629_i2forward_frame_2 - 3.3e-10 39.3 0.1 1.2e-09 37.5 0.1 1.7 1 1 0 1 1 1 1 Cytochrome P450 Mei5_like PF17021.5 NODE_30611_length_710_cov_59204.733333_g10629_i2forward_frame_2 - 0.0028 17.7 0.1 0.0054 16.8 0.1 1.4 1 0 0 1 1 1 1 Putative double-strand recombination repair-like DS PF01916.17 NODE_30611_length_710_cov_59204.733333_g10629_i2forward_frame_2 - 0.034 13.4 0.0 0.049 12.9 0.0 1.2 1 0 0 1 1 1 0 Deoxyhypusine synthase Peptidase_C92 PF05708.12 NODE_30610_length_711_cov_2.217456_g24207_i0forward_frame_3 - 3.8e-44 150.7 0.0 4.9e-44 150.4 0.0 1.2 1 0 0 1 1 1 1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Polysacc_synt PF01943.17 NODE_30598_length_711_cov_91.784024_g24195_i0reverse_frame_3 - 0.0034 16.8 9.2 0.0042 16.5 9.2 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein HARP PF07443.13 NODE_30598_length_711_cov_91.784024_g24195_i0reverse_frame_3 - 0.045 13.4 0.0 0.087 12.5 0.0 1.5 1 0 0 1 1 1 0 HepA-related protein (HARP) TRP PF06011.12 NODE_30598_length_711_cov_91.784024_g24195_i0reverse_frame_3 - 0.4 9.4 14.8 0.81 8.3 15.0 1.4 1 1 0 1 1 1 0 Transient receptor potential (TRP) ion channel DUF4017 PF13209.6 NODE_30598_length_711_cov_91.784024_g24195_i0reverse_frame_3 - 5.4 7.0 17.2 0.2 11.6 2.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4017) SHP PF03579.13 NODE_30598_length_711_cov_91.784024_g24195_i0forward_frame_3 - 0.058 13.4 0.4 0.058 13.4 0.4 2.2 2 0 0 2 2 2 0 Small hydrophobic protein DUF1981 PF09324.10 NODE_30581_length_711_cov_333.110947_g24179_i0reverse_frame_2 - 0.17 11.7 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1981) PP2C PF00481.21 NODE_30581_length_711_cov_333.110947_g24179_i0forward_frame_3 - 2.8e-35 122.2 0.0 3.4e-35 121.9 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 NODE_30581_length_711_cov_333.110947_g24179_i0forward_frame_3 - 2.8e-05 24.1 0.0 0.00014 21.8 0.0 1.9 2 0 0 2 2 2 1 Stage II sporulation protein E (SpoIIE) PP2C_2 PF13672.6 NODE_30581_length_711_cov_333.110947_g24179_i0forward_frame_3 - 0.0011 18.7 0.0 0.0015 18.2 0.0 1.3 1 0 0 1 1 1 1 Protein phosphatase 2C FumaraseC_C PF10415.9 ORF99258 - 0.032 14.7 0.3 0.11 13.0 0.0 2.0 2 0 0 2 2 2 0 Fumarase C C-terminus GREB1 PF15782.5 ORF99258 - 7.8 3.5 16.5 9 3.3 16.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer CAP PF00188.26 ORF96600 - 1.1e-06 29.5 0.0 1.4e-06 29.1 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family Methyltransf_25 PF13649.6 ORF9209 - 2.1e-14 54.0 0.2 3.4e-14 53.3 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF9209 - 6.8e-11 42.7 0.1 1e-10 42.1 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF9209 - 4.9e-05 23.2 0.0 7.1e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF9209 - 6.9e-05 22.7 0.0 0.0001 22.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF9209 - 0.00031 21.4 0.0 0.00062 20.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF9209 - 0.0023 17.5 0.0 0.0037 16.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain FtsJ PF01728.19 ORF9209 - 0.028 14.5 0.0 0.056 13.5 0.0 1.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase DUF3543 PF12063.8 ORF91050 - 0.00026 20.5 6.3 0.0015 18.0 2.6 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF3543) Fzo_mitofusin PF04799.13 ORF91050 - 2 8.0 6.1 1.2 8.7 0.1 2.4 1 1 2 3 3 3 0 fzo-like conserved region EzrA PF06160.12 ORF89578 - 0.0069 14.6 1.7 0.009 14.2 1.7 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA DUF3361 PF11841.8 ORF89578 - 0.035 14.0 1.5 0.052 13.5 1.5 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3361) EF-hand_1 PF00036.32 ORF84737 - 7.4e-08 31.4 0.1 0.0026 17.2 0.0 2.6 2 0 0 2 2 2 2 EF hand Ion_trans PF00520.31 ORF84737 - 5.2e-06 25.9 3.1 7.3e-06 25.4 3.1 1.1 1 0 0 1 1 1 1 Ion transport protein EF-hand_7 PF13499.6 ORF84737 - 6.5e-05 23.3 0.3 0.00014 22.2 0.3 1.6 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 ORF84737 - 0.00014 21.6 0.1 0.18 11.8 0.0 2.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 ORF84737 - 0.00046 19.6 0.3 0.47 10.0 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 ORF84737 - 0.004 17.0 0.1 0.13 12.1 0.1 2.5 2 0 0 2 2 2 1 EF-hand domain pair DUF4498 PF14926.6 ORF84492 - 1.3e-52 178.6 0.0 1.6e-52 178.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4498) DUF4195 PF13836.6 ORF83749 - 0.19 11.8 0.3 0.34 11.0 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4195) Glycos_transf_2 PF00535.26 ORF79965 - 0.0011 18.8 0.1 0.0027 17.5 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 ORF79965 - 0.0037 17.2 0.0 0.0052 16.7 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 ORF79965 - 0.18 11.7 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 PPR_2 PF13041.6 ORF69153 - 2.8e-05 24.2 0.2 0.032 14.4 0.1 2.4 1 1 1 2 2 2 2 PPR repeat family PPR_3 PF13812.6 ORF69153 - 0.00011 22.2 0.0 0.028 14.5 0.0 2.3 2 0 0 2 2 2 2 Pentatricopeptide repeat domain PPR_long PF17177.4 ORF69153 - 0.00067 19.1 0.6 0.0015 17.9 0.6 1.7 1 1 0 1 1 1 1 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 ORF69153 - 0.085 13.2 0.2 2.4 8.6 0.1 2.6 2 0 0 2 2 2 0 PPR repeat TPR_14 PF13428.6 ORF69153 - 0.78 10.7 4.8 0.87 10.6 1.7 2.6 2 1 1 3 3 3 0 Tetratricopeptide repeat Glyco_tran_28_C PF04101.16 ORF68344 - 8.5e-07 29.1 0.0 1.7e-06 28.1 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_4 PF13692.6 ORF68344 - 0.0001 22.7 0.1 0.00015 22.2 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 ORF68344 - 0.0063 16.1 0.0 0.0086 15.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_tran_WecB PF03808.13 ORF68344 - 0.13 12.2 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family PK_C PF02887.16 ORF68344 - 0.15 12.3 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain Methyltransf_12 PF08242.12 ORF63136 - 5.7e-07 30.2 0.0 9.5e-07 29.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF63136 - 7.4e-06 26.6 0.0 2.3e-05 25.0 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF63136 - 7.4e-05 22.6 0.0 0.0001 22.2 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF63136 - 0.0059 17.2 0.0 0.02 15.6 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain CheR PF01739.18 ORF63136 - 0.021 14.3 0.0 2.4 7.6 0.0 2.5 3 0 0 3 3 3 0 CheR methyltransferase, SAM binding domain Paired_CXXCH_1 PF09699.10 ORF60397 - 0.05 13.4 0.3 0.11 12.2 0.3 1.6 1 0 0 1 1 1 0 Doubled CXXCH motif (Paired_CXXCH_1) vATP-synt_E PF01991.18 ORF60294 - 1.3e-45 155.2 10.0 1.8e-45 154.8 10.0 1.2 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit T3SS_HrpK1 PF16937.5 ORF60294 - 0.048 13.3 0.0 0.084 12.5 0.0 1.3 1 0 0 1 1 1 0 Type III secretion system translocator protein, HrpF Spore_II_R PF09551.10 ORF60294 - 1.3 9.5 6.2 5.6 7.4 1.9 2.3 1 1 1 2 2 2 0 Stage II sporulation protein R (spore_II_R) SBDS_C PF09377.10 ORF60294 - 8.1 6.5 7.2 4.8 7.2 1.0 2.5 1 1 2 3 3 3 0 SBDS protein C-terminal domain GpcrRhopsn4 PF10192.9 ORF5968 - 0.13 11.7 0.1 0.17 11.3 0.1 1.1 1 0 0 1 1 1 0 Rhodopsin-like GPCR transmembrane domain Pericardin_rpt PF07054.11 ORF5968 - 4.3 7.5 22.0 0.22 11.7 9.9 2.7 2 0 0 2 2 2 0 Pericardin like repeat DUF5408 PF17402.2 ORF55105 - 0.11 12.4 1.6 7.8 6.5 0.4 3.2 3 0 0 3 3 3 0 Family of unknown function (DUF5408) Rft-1 PF04506.13 ORF55105 - 0.17 10.6 0.4 0.31 9.7 0.4 1.3 1 1 0 1 1 1 0 Rft protein Ribosomal_L30_N PF08079.12 ORF54169 - 0.17 12.2 4.1 0.35 11.2 4.1 1.5 1 0 0 1 1 1 0 Ribosomal L30 N-terminal domain TGT PF01702.18 ORF52967 - 2.2e-96 323.1 0.0 2.4e-96 322.9 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase LupA PF18242.1 ORF52967 - 0.05 13.3 0.0 0.14 11.8 0.0 1.8 2 1 0 2 2 2 0 Legionella ubiquitin-specific protease A domain DDHD PF02862.17 ORF52772 - 0.0076 16.4 1.0 0.0076 16.4 1.0 1.1 1 0 0 1 1 1 1 DDHD domain UPF0565 PF10561.9 ORF52772 - 0.04 13.1 0.3 0.054 12.7 0.3 1.1 1 0 0 1 1 1 0 Uncharacterised protein family UPF0565 LMBR1 PF04791.16 ORF52772 - 0.043 12.7 6.1 0.052 12.5 6.1 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF4776 PF16003.5 ORF52772 - 0.19 10.7 12.7 0.22 10.5 12.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4776) Plasmodium_Vir PF05795.11 ORF52772 - 0.21 11.0 10.7 0.26 10.7 10.7 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein Zip PF02535.22 ORF52772 - 0.52 9.5 1.8 0.61 9.2 1.8 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter GCD14 PF08704.10 ORF52772 - 0.55 9.9 4.5 0.73 9.5 4.5 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Rrn6 PF10214.9 ORF52772 - 1.1 7.7 8.0 1.2 7.5 8.0 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor V_ATPase_I PF01496.19 ORF52772 - 1.5 6.6 9.9 1.7 6.5 9.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4366 PF14283.6 ORF52772 - 2.7 8.0 11.9 0.047 13.7 3.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4366) DUF2151 PF10221.9 ORF52772 - 3.5 6.1 12.2 4 5.9 12.2 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator Exonuc_VII_L PF02601.15 ORF52772 - 4.2 6.9 9.2 4.7 6.7 9.2 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Spore_III_AB PF09548.10 ORF52772 - 9.8 6.2 12.1 14 5.7 12.1 1.2 1 0 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) DnaJ PF00226.31 ORF49082 - 0.00031 20.8 0.3 0.00068 19.7 0.0 1.7 2 0 0 2 2 2 1 DnaJ domain SBF_like PF13593.6 ORF48682 - 4e-78 262.9 15.5 4.5e-78 262.7 15.5 1.0 1 0 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) SBF PF01758.16 ORF48682 - 1.7e-06 27.8 2.9 1.7e-06 27.8 2.9 2.4 1 1 1 2 2 2 1 Sodium Bile acid symporter family IGF2_C PF08365.11 ORF48682 - 0.044 13.8 0.3 0.077 13.0 0.3 1.4 1 0 0 1 1 1 0 Insulin-like growth factor II E-peptide Gaa1 PF04114.14 ORF48682 - 1.1 8.2 8.1 0.2 10.6 4.5 1.5 2 0 0 2 2 2 0 Gaa1-like, GPI transamidase component EphA2_TM PF14575.6 ORF48682 - 1.5 9.7 4.6 12 6.9 0.9 2.5 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Mt_ATP-synt_D PF05873.12 ORF44755 - 2.1e-05 24.4 1.6 3.5e-05 23.7 1.6 1.3 1 0 0 1 1 1 1 ATP synthase D chain, mitochondrial (ATP5H) FAM195 PF14799.6 ORF44755 - 0.04 14.2 0.2 0.084 13.2 0.2 1.5 1 0 0 1 1 1 0 FAM195 family NAD_binding_8 PF13450.6 ORF43136 - 6.2e-12 45.6 0.0 1.1e-11 44.8 0.0 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 ORF43136 - 1.2e-06 28.1 0.0 1.4e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DAO PF01266.24 ORF43136 - 1.4e-05 24.8 0.0 1.6e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 ORF43136 - 0.0037 16.6 0.0 0.0057 15.9 0.0 1.2 1 0 0 1 1 1 1 Thi4 family Trp_halogenase PF04820.14 ORF43136 - 0.005 15.7 0.0 0.0072 15.2 0.0 1.2 1 0 0 1 1 1 1 Tryptophan halogenase MCRA PF06100.11 ORF43136 - 0.0054 15.6 0.0 0.0061 15.4 0.0 1.2 1 0 0 1 1 1 1 MCRA family Pyr_redox_2 PF07992.14 ORF43136 - 0.013 14.7 0.0 0.018 14.2 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Cytochrom_B561 PF03188.16 ORF42941 - 4.4e-09 36.6 10.1 1.7e-08 34.7 8.3 2.6 2 1 0 2 2 2 1 Eukaryotic cytochrome b561 DUF3325 PF11804.8 ORF42941 - 0.059 13.5 1.0 0.059 13.5 1.0 2.9 3 2 0 3 3 3 0 Protein of unknown function (DUF3325) zf-MYND PF01753.18 ORF41631 - 7.1e-09 35.6 17.9 1.3e-08 34.8 17.9 1.4 1 0 0 1 1 1 1 MYND finger zf-HIT PF04438.16 ORF41631 - 0.021 14.7 7.6 0.034 14.0 7.6 1.3 1 0 0 1 1 1 0 HIT zinc finger zf-C6H2 PF15801.5 ORF41631 - 1.8 8.9 14.1 3.2 8.1 14.1 1.4 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding SH3_3 PF08239.11 ORF40589 - 0.047 14.0 0.1 0.085 13.2 0.1 1.4 1 0 0 1 1 1 0 Bacterial SH3 domain Arf PF00025.21 ORF36893 - 2.4e-75 251.8 0.1 2.9e-75 251.5 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF36893 - 4.8e-14 52.6 0.0 6.8e-14 52.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF36893 - 8.1e-13 48.3 0.0 1e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF36893 - 8.9e-13 48.1 0.0 1.1e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF36893 - 4.3e-10 39.3 0.3 1.8e-07 30.6 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF36893 - 7.2e-10 38.6 0.0 9.3e-10 38.2 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF36893 - 2.8e-05 24.2 0.0 4.6e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF36893 - 0.028 14.6 0.0 0.063 13.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF36893 - 0.078 12.3 0.1 0.13 11.6 0.1 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase DUF3989 PF13150.6 ORF36862 - 0.0081 15.9 2.1 0.017 14.8 1.7 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3989) TFIIE_beta PF02186.15 ORF36862 - 0.052 13.8 3.8 0.53 10.6 0.3 3.4 2 1 2 4 4 4 0 TFIIE beta subunit core domain Asp PF00026.23 ORF33627 - 3.3e-19 69.4 0.1 4.8e-19 68.9 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF33627 - 0.032 14.0 0.0 0.047 13.5 0.0 1.4 1 1 0 1 1 1 0 Xylanase inhibitor C-terminal HemY_N PF07219.13 ORF33627 - 0.092 13.0 0.3 0.14 12.3 0.3 1.2 1 0 0 1 1 1 0 HemY protein N-terminus AJAP1_PANP_C PF15298.6 ORF31104 - 0.3 11.3 3.8 0.32 11.2 2.0 1.8 1 1 0 2 2 2 0 AJAP1/PANP C-terminus MORN PF02493.20 ORF29086 - 3e-06 26.8 0.4 0.034 14.1 0.0 3.7 3 0 0 3 3 3 2 MORN repeat Nitrate_red_del PF02613.15 ORF26938 - 3.9e-13 49.6 3.3 4.5e-13 49.4 2.4 1.6 1 1 0 1 1 1 1 Nitrate reductase delta subunit Vps53_N PF04100.12 ORF25808 - 0.2 10.6 0.1 0.27 10.1 0.1 1.1 1 0 0 1 1 1 0 Vps53-like, N-terminal vATP-synt_E PF01991.18 ORF23712 - 1.3e-45 155.2 10.0 1.8e-45 154.8 10.0 1.2 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit T3SS_HrpK1 PF16937.5 ORF23712 - 0.048 13.3 0.0 0.084 12.5 0.0 1.3 1 0 0 1 1 1 0 Type III secretion system translocator protein, HrpF Spore_II_R PF09551.10 ORF23712 - 1.3 9.5 6.2 5.6 7.4 1.9 2.3 1 1 1 2 2 2 0 Stage II sporulation protein R (spore_II_R) SBDS_C PF09377.10 ORF23712 - 8.1 6.5 7.2 4.8 7.2 1.0 2.5 1 1 2 3 3 3 0 SBDS protein C-terminal domain DUF572 PF04502.13 ORF21053 - 3.3e-42 145.3 19.7 3.8e-42 145.1 19.7 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) TF_Zn_Ribbon PF08271.12 ORF21053 - 0.022 14.3 0.5 0.052 13.1 0.5 1.7 1 0 0 1 1 1 0 TFIIB zinc-binding Tudor_1_RapA PF18339.1 ORF21053 - 0.2 11.6 0.0 0.47 10.4 0.0 1.6 1 0 0 1 1 1 0 RapA N-terminal Tudor like domain 1 VitK2_biosynth PF02621.14 ORF21053 - 0.43 10.0 2.3 0.7 9.4 2.3 1.3 1 0 0 1 1 1 0 Menaquinone biosynthesis DUF1948 PF09185.10 ORF21053 - 5.2 6.9 9.5 6.3 6.7 0.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1948) ATG27 PF09451.10 ORF20353 - 0.0034 17.3 0.0 0.0045 16.9 0.0 1.2 1 0 0 1 1 1 1 Autophagy-related protein 27 Apolipoprotein PF01442.18 ORF20353 - 0.043 13.7 1.8 0.16 11.8 1.8 2.1 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain MDMPI_N PF11716.8 ORF20353 - 0.12 13.1 1.5 0.22 12.2 1.5 1.4 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain COQ7 PF03232.13 ORF19842 - 1 9.1 3.6 0.3 10.8 0.2 1.8 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 Filament PF00038.21 ORF1936 - 0.0035 17.0 2.7 0.005 16.5 0.3 2.0 2 0 0 2 2 2 1 Intermediate filament protein HMMR_N PF15905.5 ORF1936 - 0.0064 16.0 0.1 0.012 15.2 0.1 1.4 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal ApoLp-III PF07464.11 ORF1936 - 0.014 15.5 0.1 0.019 15.0 0.1 1.2 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) LXG PF04740.12 ORF1936 - 0.014 15.1 0.4 0.03 14.0 0.2 1.7 1 1 0 1 1 1 0 LXG domain of WXG superfamily FlxA PF14282.6 ORF1936 - 0.015 15.2 0.1 0.038 14.0 0.1 1.5 1 1 0 1 1 1 0 FlxA-like protein Baculo_PEP_C PF04513.12 ORF1936 - 0.02 15.0 0.5 0.82 9.7 0.4 2.5 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4404 PF14357.6 ORF1936 - 0.022 15.4 2.3 0.061 14.0 0.3 2.6 2 2 1 3 3 3 0 Domain of unknown function (DUF4404) Atg14 PF10186.9 ORF1936 - 0.025 13.7 0.8 0.056 12.5 0.3 1.6 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF1936 - 0.035 13.0 1.0 0.048 12.5 1.0 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein EzrA PF06160.12 ORF1936 - 0.045 11.9 0.6 0.058 11.6 0.6 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Fib_alpha PF08702.10 ORF1936 - 0.087 13.0 0.7 0.16 12.2 0.7 1.5 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4618 PF15397.6 ORF1936 - 0.1 12.0 2.9 2.4 7.5 1.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) DUF724 PF05266.14 ORF1936 - 0.12 12.2 0.8 0.18 11.6 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) WXG100 PF06013.12 ORF1936 - 0.13 12.6 0.4 17 5.7 0.0 2.5 2 0 0 2 2 2 0 Proteins of 100 residues with WXG SlyX PF04102.12 ORF1936 - 0.16 12.6 3.1 13 6.5 0.0 3.4 3 1 1 4 4 3 0 SlyX XhlA PF10779.9 ORF1936 - 0.29 11.3 1.8 0.81 9.9 0.6 2.4 1 1 0 2 2 2 0 Haemolysin XhlA CorA PF01544.18 ORF1936 - 0.3 10.4 3.1 0.35 10.1 0.3 2.0 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein COG2 PF06148.11 ORF1936 - 0.37 10.9 4.9 13 5.8 0.2 2.7 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4164 PF13747.6 ORF1936 - 7.7 6.9 11.8 7.4 6.9 0.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4164) MORN PF02493.20 ORF19337 - 2e-37 124.9 67.9 2.1e-07 30.5 0.5 9.2 9 0 0 9 9 9 9 MORN repeat CysG_dimeriser PF10414.9 ORF18791 - 0.13 12.0 0.3 0.13 12.0 0.3 2.0 2 0 0 2 2 2 0 Sirohaem synthase dimerisation region Tetraspanin PF00335.20 ORF15880 - 1.6e-08 34.5 7.2 8.9e-08 32.1 7.6 2.1 1 1 0 1 1 1 1 Tetraspanin family Exonuc_VII_L PF02601.15 ORF148472 - 1.2 8.6 5.2 1.6 8.2 5.2 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Med30 PF11315.8 ORF148472 - 1.7 8.9 6.1 6.9 6.9 0.5 2.4 2 1 1 3 3 3 0 Mediator complex subunit 30 4HPAD_g_N PF18671.1 ORF145893 - 0.14 11.9 0.8 0.26 11.1 0.8 1.4 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal Glyco_hydro_9 PF00759.19 ORF145637 - 2.2 7.6 5.5 3 7.2 5.5 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 9 G3P_acyltransf PF02660.15 ORF145186 - 9.5e-50 168.8 9.4 1.2e-49 168.6 9.4 1.1 1 0 0 1 1 1 1 Glycerol-3-phosphate acyltransferase LELP1 PF15042.6 ORF140456 - 4.8 7.6 22.0 0.25 11.7 9.8 3.2 3 0 0 3 3 3 0 Late cornified envelope-like proline-rich protein 1 MFS_1 PF07690.16 ORF139846 - 0.0042 16.1 14.2 0.0064 15.5 14.2 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily EMP70 PF02990.16 ORF139846 - 0.056 12.1 1.4 0.071 11.8 1.4 1.3 1 0 0 1 1 1 0 Endomembrane protein 70 DUF1294 PF06961.13 ORF139846 - 0.081 13.2 0.6 1.1 9.6 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1294) Mem_trans PF03547.18 ORF139846 - 0.12 10.7 0.0 0.18 10.2 0.0 1.2 1 0 0 1 1 1 0 Membrane transport protein CDK2AP PF09806.9 ORF139817 - 0.027 14.6 0.0 0.036 14.1 0.0 1.2 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein Mad3_BUB1_I PF08311.12 ORF139373 - 0.015 15.3 2.2 0.027 14.5 2.2 1.4 1 0 0 1 1 1 0 Mad3/BUB1 homology region 1 DUF936 PF06075.12 ORF139300 - 0.56 9.1 7.2 0.69 8.8 7.2 1.1 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) SWIRM-assoc_2 PF16496.5 ORF139300 - 1.4 7.7 4.5 1.8 7.3 4.5 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal SHE3 PF17078.5 ORF134172 - 0.0039 16.9 13.6 0.0055 16.4 13.6 1.2 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Exonuc_VII_L PF02601.15 ORF134172 - 0.013 15.1 5.7 0.02 14.5 5.7 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit PKcGMP_CC PF16808.5 ORF134172 - 0.05 13.5 13.0 0.41 10.5 4.4 2.6 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase V_ATPase_I PF01496.19 ORF134172 - 0.073 11.0 5.8 0.075 10.9 5.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Spectrin PF00435.21 ORF134172 - 0.45 11.0 10.6 1.3 9.6 7.2 2.3 1 1 1 2 2 2 0 Spectrin repeat RecG_N PF17190.4 ORF134172 - 1.1 10.0 14.9 2 9.2 14.0 1.8 1 1 0 1 1 1 0 RecG N-terminal helical domain DUF3573 PF12097.8 ORF134172 - 1.3 7.8 3.1 1.7 7.4 3.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) FlbD PF06289.11 ORF134172 - 1.5 8.5 4.5 0.28 10.8 0.7 1.7 2 0 0 2 2 2 0 Flagellar and Swarming motility proteins QueH PF02677.14 ORF134172 - 1.5 8.9 13.5 1.8 8.7 3.8 2.2 2 0 0 2 2 2 0 Epoxyqueuosine reductase QueH Streptin-Immun PF11083.8 ORF134172 - 4.6 7.7 11.9 11 6.5 11.9 1.6 1 1 0 1 1 1 0 Lantibiotic streptin immunity protein MitMem_reg PF13012.6 ORF134172 - 6 7.3 8.0 10 6.6 8.0 1.6 1 1 0 1 1 1 0 Maintenance of mitochondrial structure and function Swi5 PF07061.11 ORF134172 - 8.6 6.5 12.6 6.9 6.8 2.2 2.5 2 0 0 2 2 2 0 Swi5 CENP-H PF05837.12 ORF134172 - 9 6.8 11.4 16 5.9 10.8 1.8 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DUF3498 PF12004.8 ORF134172 - 9.2 5.3 17.4 20 4.2 17.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3498) CAP PF00188.26 ORF13301 - 1.1e-06 29.5 0.0 1.4e-06 29.1 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DUF4191 PF13829.6 ORF130280 - 7 5.9 10.3 0.32 10.3 3.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) MIEAP PF16026.5 ORF129083 - 0.52 10.5 2.8 0.39 10.9 1.1 1.6 2 0 0 2 2 2 0 Mitochondria-eating protein TRP PF06011.12 ORF127169 - 2.3e-05 23.3 12.5 3e-05 22.9 12.5 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel MORN PF02493.20 ORF127076 - 1.5e-08 34.0 5.2 0.0081 16.0 0.0 4.3 4 0 0 4 4 4 3 MORN repeat NlpE_C PF17185.4 ORF124770 - 5.2e-33 113.2 0.1 2.2e-32 111.2 0.0 2.0 2 1 0 2 2 2 1 NlpE C-terminal OB domain NlpE PF04170.12 ORF124770 - 6.8e-27 94.3 0.0 1.6e-26 93.0 0.0 1.7 1 0 0 1 1 1 1 NlpE N-terminal domain Ribosomal_L27 PF01016.19 ORF123863 - 5.1e-23 80.9 0.2 8.4e-23 80.2 0.2 1.4 1 0 0 1 1 1 1 Ribosomal L27 protein Minor_capsid_2 PF11114.8 ORF123863 - 0.076 13.0 0.5 1.3 9.1 0.5 2.4 1 1 0 1 1 1 0 Minor capsid protein DUF927 PF06048.11 ORF123863 - 0.18 11.4 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF927) Form_Nir_trans PF01226.17 ORF123272 - 8.5e-54 182.4 29.3 9.6e-54 182.2 29.3 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter DUF3543 PF12063.8 ORF121160 - 0.00026 20.5 6.3 0.0015 18.0 2.6 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF3543) Fzo_mitofusin PF04799.13 ORF121160 - 2 8.0 6.1 1.2 8.7 0.1 2.4 1 1 2 3 3 3 0 fzo-like conserved region CAP PF00188.26 ORF120944 - 1.1e-06 29.5 0.0 1.4e-06 29.1 0.0 1.2 1 0 0 1 1 1 1 Cysteine-rich secretory protein family EF-hand_7 PF13499.6 ORF120744 - 0.003 18.0 2.0 0.29 11.6 2.0 2.7 1 1 0 1 1 1 1 EF-hand domain pair Pellino PF04710.14 ORF120744 - 0.013 14.2 1.2 0.015 14.0 1.2 1.1 1 0 0 1 1 1 0 Pellino EF-hand_6 PF13405.6 ORF120744 - 0.17 11.9 0.7 33 4.8 0.0 2.9 2 0 0 2 2 2 0 EF-hand domain UDPG_MGDP_dh_C PF03720.15 ORF120129 - 0.034 14.6 0.0 0.056 13.9 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PDZ PF00595.24 ORF114249 - 1.2e-07 31.9 0.5 0.014 15.7 0.1 2.8 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF114249 - 2.1e-06 27.9 0.0 0.0022 18.3 0.0 2.5 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 ORF114249 - 2.9e-05 23.8 0.0 0.15 12.0 0.0 2.7 3 0 0 3 3 3 2 PDZ domain PAC3 PF10178.9 ORF112639 - 3e-05 24.1 0.0 5.5e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Proteasome assembly chaperone 3 POC3_POC4 PF10448.9 ORF112639 - 0.011 15.8 0.8 0.018 15.1 0.8 1.5 1 1 0 1 1 1 0 20S proteasome chaperone assembly proteins 3 and 4 zf-LITAF-like PF10601.9 ORF110629 - 5e-09 36.3 15.0 6.3e-09 36.0 15.0 1.1 1 0 0 1 1 1 1 LITAF-like zinc ribbon domain SBP_bac_3 PF00497.20 ORF109848 - 2.7e-48 164.4 0.7 3.1e-48 164.2 0.7 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1 PF09084.11 ORF109848 - 8.4e-05 22.6 0.0 0.0017 18.4 0.0 2.1 1 1 1 2 2 2 1 NMT1/THI5 like Lig_chan-Glu_bd PF10613.9 ORF109848 - 0.014 15.6 0.0 0.024 14.8 0.0 1.4 1 0 0 1 1 1 0 Ligated ion channel L-glutamate- and glycine-binding site GST_N_3 PF13417.6 ORF107161 - 1.9e-08 34.6 0.0 6.8e-08 32.8 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 ORF107161 - 5.4e-08 33.1 0.0 9.4e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF107161 - 1.7e-07 31.4 0.1 2.6e-07 30.8 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF107161 - 1.8e-07 31.4 0.0 3.9e-07 30.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF107161 - 0.00091 19.4 0.0 0.0019 18.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain PSA_CBD PF18341.1 ORF107161 - 0.072 13.1 0.0 0.58 10.2 0.0 2.2 2 0 0 2 2 2 0 PSA endolysin C-terminal cell wall binding domain Nuclease_act PF08133.11 ORF107161 - 0.39 10.9 1.6 1.1 9.5 0.1 2.3 2 0 0 2 2 2 0 Anticodon nuclease activator family Filament PF00038.21 ORF101916 - 0.0035 17.0 2.7 0.005 16.5 0.3 2.0 2 0 0 2 2 2 1 Intermediate filament protein HMMR_N PF15905.5 ORF101916 - 0.0064 16.0 0.1 0.012 15.2 0.1 1.4 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal ApoLp-III PF07464.11 ORF101916 - 0.014 15.5 0.1 0.019 15.0 0.1 1.2 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) LXG PF04740.12 ORF101916 - 0.014 15.1 0.4 0.03 14.0 0.2 1.7 1 1 0 1 1 1 0 LXG domain of WXG superfamily FlxA PF14282.6 ORF101916 - 0.015 15.2 0.1 0.038 14.0 0.1 1.5 1 1 0 1 1 1 0 FlxA-like protein Baculo_PEP_C PF04513.12 ORF101916 - 0.02 15.0 0.5 0.82 9.7 0.4 2.5 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4404 PF14357.6 ORF101916 - 0.022 15.4 2.3 0.061 14.0 0.3 2.6 2 2 1 3 3 3 0 Domain of unknown function (DUF4404) Atg14 PF10186.9 ORF101916 - 0.025 13.7 0.8 0.056 12.5 0.3 1.6 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 ORF101916 - 0.035 13.0 1.0 0.048 12.5 1.0 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein EzrA PF06160.12 ORF101916 - 0.045 11.9 0.6 0.058 11.6 0.6 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA Fib_alpha PF08702.10 ORF101916 - 0.087 13.0 0.7 0.16 12.2 0.7 1.5 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF4618 PF15397.6 ORF101916 - 0.1 12.0 2.9 2.4 7.5 1.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) DUF724 PF05266.14 ORF101916 - 0.12 12.2 0.8 0.18 11.6 0.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF724) WXG100 PF06013.12 ORF101916 - 0.13 12.6 0.4 17 5.7 0.0 2.5 2 0 0 2 2 2 0 Proteins of 100 residues with WXG SlyX PF04102.12 ORF101916 - 0.16 12.6 3.1 13 6.5 0.0 3.4 3 1 1 4 4 3 0 SlyX XhlA PF10779.9 ORF101916 - 0.29 11.3 1.8 0.81 9.9 0.6 2.4 1 1 0 2 2 2 0 Haemolysin XhlA CorA PF01544.18 ORF101916 - 0.3 10.4 3.1 0.35 10.1 0.3 2.0 1 1 0 2 2 2 0 CorA-like Mg2+ transporter protein COG2 PF06148.11 ORF101916 - 0.37 10.9 4.9 13 5.8 0.2 2.7 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4164 PF13747.6 ORF101916 - 7.7 6.9 11.8 7.4 6.9 0.7 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4164) EF-hand_1 PF00036.32 NODE_30958_length_703_cov_90.097305_g24499_i0reverse_frame_1 - 0.055 13.0 0.1 0.15 11.7 0.1 1.8 1 0 0 1 1 1 0 EF hand Presenilin PF01080.17 NODE_30958_length_703_cov_90.097305_g24499_i0forward_frame_1 - 0.73 8.5 3.5 1 8.0 3.5 1.1 1 0 0 1 1 1 0 Presenilin DUF945 PF06097.11 NODE_30889_length_705_cov_2.671642_g24442_i0forward_frame_1 - 7.3e-44 150.6 0.2 8.6e-44 150.4 0.2 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF945) DUF5627 PF18620.1 NODE_30889_length_705_cov_2.671642_g24442_i0forward_frame_1 - 0.079 12.8 0.0 0.74 9.7 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5627) SieB PF14163.6 NODE_30882_length_705_cov_61.874627_g23847_i1reverse_frame_1 - 1.8 8.0 7.3 3.4 7.2 7.3 1.4 1 0 0 1 1 1 0 Super-infection exclusion protein B DNA_Packaging_2 PF11123.8 NODE_30882_length_705_cov_61.874627_g23847_i1forward_frame_1 - 0.012 15.8 1.8 0.014 15.6 0.3 1.8 2 0 0 2 2 2 0 DNA packaging protein DUF1501 PF07394.12 NODE_30882_length_705_cov_61.874627_g23847_i1forward_frame_1 - 2.6 7.0 4.9 2.7 7.0 1.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1501) HEPN_RiboL-PSP PF18735.1 NODE_30882_length_705_cov_61.874627_g23847_i1forward_frame_1 - 5.7 6.8 10.8 0.39 10.6 3.7 2.0 1 1 1 2 2 2 0 RiboL-PSP-HEPN Mlo PF03094.15 NODE_30881_length_705_cov_67.728358_g24435_i0forward_frame_1 - 0.019 13.4 3.7 0.028 12.8 3.7 1.3 1 0 0 1 1 1 0 Mlo family WD40 PF00400.32 NODE_30800_length_707_cov_2.327381_g24371_i0reverse_frame_3 - 4.9e-15 55.7 13.4 0.00024 21.8 0.5 4.9 4 1 1 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 NODE_30800_length_707_cov_2.327381_g24371_i0reverse_frame_3 - 2.3e-08 34.2 0.1 8.9e-07 29.1 0.1 2.6 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 NODE_30800_length_707_cov_2.327381_g24371_i0reverse_frame_3 - 9.9e-06 25.1 0.1 0.00044 19.7 0.0 2.6 1 1 2 3 3 3 1 WD40-like domain Transp_Tc5_C PF04236.15 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_3 - 0.021 15.2 0.3 0.037 14.4 0.3 1.4 1 0 0 1 1 1 0 Tc5 transposase C-terminal domain Apolipoprotein PF01442.18 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.0037 17.1 19.6 0.011 15.6 7.3 2.5 1 1 0 2 2 2 2 Apolipoprotein A1/A4/E domain Filament PF00038.21 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.0054 16.3 28.7 0.0069 16.0 15.1 2.1 1 1 0 2 2 2 2 Intermediate filament protein Baculo_PEP_C PF04513.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.0055 16.7 24.1 0.038 14.0 3.8 3.3 1 1 1 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus EzrA PF06160.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.012 13.8 29.9 0.016 13.4 8.3 2.5 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA Stathmin PF00836.19 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.014 15.4 10.8 0.014 15.4 10.8 2.6 2 1 0 2 2 2 0 Stathmin family CdvA PF18822.1 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.016 15.0 28.7 0.16 11.8 1.2 4.4 1 1 2 4 4 4 0 CdvA-like coiled-coil domain DUF1664 PF07889.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.017 15.2 4.0 0.017 15.2 4.0 4.0 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) YtxH PF12732.7 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.033 14.7 11.4 1.3 9.6 0.0 3.4 2 1 1 3 3 3 0 YtxH-like protein Suppressor_APC PF11414.8 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.091 12.8 10.2 0.23 11.5 0.9 3.5 2 1 2 4 4 4 0 Adenomatous polyposis coli tumour suppressor protein HSP9_HSP12 PF04119.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.18 12.2 3.2 2.5 8.6 0.1 3.3 3 1 0 3 3 2 0 Heat shock protein 9/12 Prefoldin_2 PF01920.20 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.29 11.1 32.2 1.4 8.9 12.7 3.5 2 1 1 3 3 3 0 Prefoldin subunit Muted PF14942.6 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.45 10.8 30.2 11 6.3 4.3 3.2 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein ApoLp-III PF07464.11 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 0.77 9.8 26.9 0.59 10.2 15.7 2.7 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) Mis12 PF05859.12 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 1.4 9.0 18.6 0.088 12.9 1.6 3.0 2 1 1 3 3 3 0 Mis12 protein Focal_AT PF03623.13 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 2 8.4 18.9 0.11 12.4 5.6 3.0 1 1 2 3 3 3 0 Focal adhesion targeting region Exonuc_VII_L PF02601.15 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 2.4 7.7 23.4 1.2 8.6 10.0 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit DUF4407 PF14362.6 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 2.7 7.2 17.5 43 3.3 17.5 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) COG2 PF06148.11 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 2.9 8.0 21.1 0.5 10.4 1.8 3.8 2 1 2 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF883 PF05957.13 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 3.1 8.5 13.8 8.5 7.1 0.8 3.9 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) Cep57_CLD_2 PF14197.6 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 3.4 7.8 16.0 0.76 9.9 3.5 3.9 3 1 0 3 3 3 0 Centrosome localisation domain of PPC89 ApoO PF09769.9 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 4.1 7.4 12.1 6.7 6.7 0.6 3.7 1 1 3 4 4 4 0 Apolipoprotein O Prominin PF05478.11 NODE_30793_length_707_cov_16.242560_g24364_i0reverse_frame_2 - 8.7 4.2 25.8 0.57 8.1 11.2 2.0 1 1 1 2 2 2 0 Prominin Arm PF00514.23 NODE_30781_length_707_cov_99.263393_g24353_i0reverse_frame_2 - 0.0083 16.1 0.6 1.4 9.1 0.1 3.0 2 1 0 2 2 2 2 Armadillo/beta-catenin-like repeat Mo25 PF08569.11 NODE_30781_length_707_cov_99.263393_g24353_i0reverse_frame_2 - 0.18 11.1 0.0 0.25 10.7 0.0 1.3 1 1 0 1 1 1 0 Mo25-like zf-RanBP PF00641.18 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 9.4e-12 44.0 19.3 7.9e-07 28.3 2.0 3.1 3 0 0 3 3 3 2 Zn-finger in Ran binding protein and others zf-AN1 PF01428.16 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 3e-05 24.1 3.0 3e-05 24.1 3.0 4.3 4 0 0 4 4 4 1 AN1-like Zinc finger DZR PF12773.7 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.0041 17.1 8.6 0.0041 17.1 8.6 3.5 3 1 1 4 4 4 2 Double zinc ribbon IBR PF01485.21 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.025 14.8 2.9 0.025 14.8 2.9 3.4 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain Transp_Tc5_C PF04236.15 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.03 14.7 1.2 0.03 14.7 1.2 2.8 3 1 0 3 3 3 0 Tc5 transposase C-terminal domain zinc_ribbon_2 PF13240.6 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.45 10.3 11.6 1.3 8.9 0.8 3.6 3 0 0 3 3 3 0 zinc-ribbon domain C1_1 PF00130.22 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 0.58 10.1 0.1 0.58 10.1 0.1 4.2 2 1 2 4 4 4 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-piccolo PF05715.13 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 3.4 7.9 15.9 3.3 7.9 3.2 3.6 2 1 1 3 3 3 0 Piccolo Zn-finger PHD_2 PF13831.6 NODE_30771_length_707_cov_175.626488_g24344_i0forward_frame_3 - 7.2 6.3 15.3 2.5 7.7 0.2 4.2 4 0 0 4 4 4 0 PHD-finger Peptidase_M14 PF00246.24 NODE_30742_length_708_cov_2.267459_g24323_i0reverse_frame_2 - 0.00092 19.1 0.6 0.0016 18.3 0.3 1.6 2 0 0 2 2 2 1 Zinc carboxypeptidase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks92.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks92.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks92.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks92.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:33:28 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Activator-TraM PF11657.8 NODE_30737_length_708_cov_13.368499_g24318_i0reverse_frame_3 - 6.4 6.6 10.1 1.3 8.9 4.5 2.2 2 0 0 2 2 2 0 Transcriptional activator TraM Aft1_OSA PF11785.8 NODE_30706_length_708_cov_256.344725_g24287_i0reverse_frame_3 - 0.032 14.7 0.0 2.5 8.6 0.0 2.7 3 0 0 3 3 3 0 Aft1 osmotic stress response (OSM) domain FixO PF02433.15 NODE_30706_length_708_cov_256.344725_g24287_i0reverse_frame_2 - 0.067 12.6 0.2 0.11 11.9 0.2 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO mTERF PF02536.14 NODE_30706_length_708_cov_256.344725_g24287_i0forward_frame_3 - 2.8e-31 108.6 0.0 3.8e-30 104.9 0.0 2.0 1 1 0 1 1 1 1 mTERF RuvA_C PF07499.13 NODE_30706_length_708_cov_256.344725_g24287_i0forward_frame_3 - 0.00014 22.2 1.0 2.7 8.5 0.0 3.4 1 1 2 3 3 3 3 RuvA, C-terminal domain DUF3606 PF12244.8 NODE_30706_length_708_cov_256.344725_g24287_i0forward_frame_3 - 0.16 12.0 0.1 24 5.0 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3606) Transglycosylas PF06737.14 NODE_30706_length_708_cov_256.344725_g24287_i0forward_frame_2 - 0.037 14.7 1.7 3.7 8.3 0.2 2.6 1 1 1 2 2 2 0 Transglycosylase-like domain HrpB7 PF09486.10 NODE_30705_length_708_cov_286.846954_g24286_i0reverse_frame_3 - 2.7 8.4 14.4 0.028 14.8 5.6 1.9 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) Ac76 PF05814.11 ORF9961 - 0.055 13.5 5.5 1.3 9.0 0.2 2.3 2 0 0 2 2 2 0 Orf76 (Ac76) Tetraspanin PF00335.20 ORF9961 - 1.8 8.2 7.3 0.7 9.6 3.1 2.2 1 1 0 1 1 1 0 Tetraspanin family DUF2070 PF09843.9 ORF9961 - 5.2 5.2 9.9 6.8 4.8 9.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Big_4 PF07532.11 ORF97142 - 0.032 14.0 0.2 0.53 10.1 0.0 2.7 2 1 1 3 3 3 0 Bacterial Ig-like domain (group 4) CBM_1 PF00734.18 ORF96689 - 0.42 10.6 5.8 0.62 10.1 1.5 3.0 2 0 0 2 2 2 0 Fungal cellulose binding domain RseC_MucC PF04246.12 ORF941 - 4.9e-32 110.6 0.4 7.8e-32 110.0 0.4 1.3 1 0 0 1 1 1 1 Positive regulator of sigma(E), RseC/MucC Gly-zipper_Omp PF13488.6 ORF941 - 0.04 13.9 0.4 0.063 13.3 0.4 1.3 1 0 0 1 1 1 0 Glycine zipper Phage_holin_3_6 PF07332.11 ORF941 - 0.87 9.6 4.6 1.3 9.1 4.6 1.2 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF3678 PF12435.8 ORF94014 - 3.9 6.9 9.0 0.12 11.8 2.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3678) Acetyltransf_1 PF00583.25 ORF85866 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF85866 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF85866 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF85866 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF85866 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF85866 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF85866 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF85866 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF85866 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF85866 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain Lip_A_acyltrans PF03279.13 ORF83382 - 2.5e-78 263.2 0.1 2.9e-78 263.1 0.1 1.0 1 0 0 1 1 1 1 Bacterial lipid A biosynthesis acyltransferase NICE-1 PF15845.5 ORF81828 - 0.16 12.8 0.2 0.16 12.8 0.2 2.9 2 1 0 2 2 2 0 Cysteine-rich C-terminal 1 family Ank PF00023.30 ORF81684 - 0.06 13.8 0.1 7.5 7.2 0.0 2.6 2 0 0 2 2 2 0 Ankyrin repeat Aminotran_1_2 PF00155.21 ORF80598 - 9.3e-05 21.8 0.0 9.9e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II La PF05383.17 ORF77036 - 3.3e-15 55.9 0.2 5.3e-15 55.2 0.2 1.3 1 0 0 1 1 1 1 La domain RRM_1 PF00076.22 ORF77036 - 7.7e-12 44.9 0.0 1.2e-11 44.3 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF4211 PF13926.6 ORF76757 - 0.019 15.0 0.3 0.019 15.0 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4211) zf-C2H2 PF00096.26 ORF75540 - 3.9e-11 42.8 19.1 0.00094 19.5 0.9 4.1 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF75540 - 2.3e-08 34.2 15.1 0.0053 17.5 0.7 4.3 4 0 0 4 4 4 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF75540 - 5.3e-05 23.5 4.4 0.0052 17.2 1.1 3.8 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_8 PF15909.5 ORF75540 - 0.01 16.1 10.8 0.011 16.1 5.2 2.6 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_6 PF13912.6 ORF75540 - 0.018 15.0 1.7 0.018 15.0 1.7 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger VKOR PF07884.14 ORF75540 - 0.024 14.8 0.9 1.4 9.2 0.0 3.0 3 1 1 4 4 4 0 Vitamin K epoxide reductase family zf_UBZ PF18439.1 ORF75540 - 0.026 14.1 0.4 0.065 12.8 0.4 1.7 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf_ZIC PF18366.1 ORF75540 - 0.21 11.7 4.1 4.3 7.5 0.5 2.5 1 1 1 2 2 2 0 Zic proteins zinc finger domain zf-C2H2_jaz PF12171.8 ORF75540 - 0.27 11.6 11.4 2.5 8.5 3.4 3.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding FOXP-CC PF16159.5 ORF75540 - 0.53 11.0 5.6 0.19 12.4 1.3 2.2 2 1 0 2 2 2 0 FOXP coiled-coil domain Acetyltransf_1 PF00583.25 ORF74118 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF74118 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF74118 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF74118 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF74118 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF74118 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF74118 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF74118 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF74118 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF74118 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain UBD PF16455.5 ORF71804 - 4.4e-14 52.6 0.0 7.2e-14 51.9 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-binding domain ubiquitin PF00240.23 ORF71804 - 2.9e-05 23.7 0.0 4.8e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family Med3 PF11593.8 ORF70495 - 0.14 11.3 6.4 0.17 11.0 6.4 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Ntox16 PF15523.6 ORF69161 - 0.013 15.7 0.5 0.043 14.1 0.5 2.0 1 0 0 1 1 1 0 Novel toxin 16 Menin PF05053.13 ORF68125 - 0.06 11.7 7.7 0.079 11.3 7.7 1.2 1 0 0 1 1 1 0 Menin DUF1682 PF07946.14 ORF68125 - 0.13 11.4 2.4 0.2 10.9 2.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) B9-C2 PF07162.11 ORF68030 - 1.8e-37 129.1 0.0 2.2e-37 128.8 0.0 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein NAD_binding_11 PF14833.6 ORF66192 - 7.8e-33 113.3 0.0 1.1e-32 112.9 0.0 1.2 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NAD_binding_2 PF03446.15 ORF66192 - 1e-24 87.5 0.0 1.7e-24 86.8 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase EF-hand_7 PF13499.6 ORF61242 - 2.1e-14 53.7 1.1 2.1e-07 31.3 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 ORF61242 - 2.4e-14 51.9 4.0 1.5e-05 24.5 0.1 4.4 3 1 0 4 4 4 3 EF-hand domain EF-hand_1 PF00036.32 ORF61242 - 3.4e-14 51.2 7.5 0.00073 18.9 0.1 4.5 4 0 0 4 4 4 4 EF hand EF-hand_8 PF13833.6 ORF61242 - 5.8e-07 29.3 5.3 0.0042 16.9 0.7 3.3 1 1 3 4 4 4 3 EF-hand domain pair EF-hand_5 PF13202.6 ORF61242 - 2.4e-06 26.8 1.4 0.018 14.5 0.1 3.9 3 0 0 3 3 3 2 EF hand EF-hand_9 PF14658.6 ORF61242 - 0.0019 18.5 0.0 2.9 8.3 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain UPF0154 PF03672.13 ORF61242 - 0.16 12.0 0.0 1.5 8.9 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) HAD_2 PF13419.6 ORF60956 - 6.9e-21 75.1 0.0 9.4e-21 74.7 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF60956 - 2.8e-17 63.7 0.1 6.4e-17 62.5 0.1 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF60956 - 4.5e-12 45.8 0.0 8.4e-12 45.0 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 ORF60956 - 1.4e-05 25.5 0.0 2.1e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Endonuclease_1 PF04231.13 ORF56656 - 1.5e-44 152.5 7.5 2.6e-44 151.7 7.5 1.4 1 1 0 1 1 1 1 Endonuclease I CTP-dep_RFKase PF01982.16 ORF54567 - 0.0062 16.6 0.0 0.011 15.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF120 Big_10 PF17964.1 ORF54567 - 0.12 12.3 0.4 0.16 11.9 0.4 1.1 1 0 0 1 1 1 0 Bacterial Ig domain GSP_synth PF03738.14 ORF53480 - 9.2e-41 140.3 0.0 1.1e-40 140.1 0.0 1.0 1 0 0 1 1 1 1 Glutathionylspermidine synthase preATP-grasp NAD_binding_6 PF08030.12 ORF53419 - 1.8e-17 63.9 0.1 2.6e-17 63.4 0.1 1.2 1 0 0 1 1 1 1 Ferric reductase NAD binding domain Adipogenin PF15202.6 ORF53419 - 0.014 15.4 0.0 0.038 14.0 0.0 1.7 2 0 0 2 2 2 0 Adipogenin NAD_binding_1 PF00175.21 ORF53419 - 0.019 15.6 0.1 0.95 10.1 0.1 2.4 1 1 0 1 1 1 0 Oxidoreductase NAD-binding domain tRNA_anti_2 PF13742.6 ORF53419 - 0.09 13.0 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain zf-C2H2 PF00096.26 ORF51109 - 3.9e-11 42.8 19.1 0.00094 19.5 0.9 4.1 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF51109 - 2.3e-08 34.2 15.1 0.0053 17.5 0.7 4.3 4 0 0 4 4 4 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF51109 - 5.3e-05 23.5 4.4 0.0052 17.2 1.1 3.8 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_8 PF15909.5 ORF51109 - 0.01 16.1 10.8 0.011 16.1 5.2 2.6 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_6 PF13912.6 ORF51109 - 0.018 15.0 1.7 0.018 15.0 1.7 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger VKOR PF07884.14 ORF51109 - 0.024 14.8 0.9 1.4 9.2 0.0 3.0 3 1 1 4 4 4 0 Vitamin K epoxide reductase family zf_UBZ PF18439.1 ORF51109 - 0.026 14.1 0.4 0.065 12.8 0.4 1.7 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf_ZIC PF18366.1 ORF51109 - 0.21 11.7 4.1 4.3 7.5 0.5 2.5 1 1 1 2 2 2 0 Zic proteins zinc finger domain zf-C2H2_jaz PF12171.8 ORF51109 - 0.27 11.6 11.4 2.5 8.5 3.4 3.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding FOXP-CC PF16159.5 ORF51109 - 0.53 11.0 5.6 0.19 12.4 1.3 2.2 2 1 0 2 2 2 0 FOXP coiled-coil domain PAN_4 PF14295.6 ORF50636 - 0.0019 18.1 3.4 0.009 15.9 3.4 2.3 1 0 0 1 1 1 1 PAN domain DnaJ PF00226.31 ORF49621 - 0.00095 19.2 0.0 0.0015 18.6 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain RIB43A PF05914.12 ORF45667 - 7.5e-25 87.5 39.6 8.6e-25 87.3 39.6 1.0 1 0 0 1 1 1 1 RIB43A TPH PF13868.6 ORF45667 - 0.42 9.1 52.8 0.025 13.1 19.9 2.2 2 0 0 2 2 2 0 Trichohyalin-plectin-homology domain Sde2_N_Ubi PF13019.6 ORF452 - 5.2e-20 71.9 0.6 8.2e-20 71.3 0.6 1.3 1 0 0 1 1 1 1 Silencing defective 2 N-terminal ubiquitin domain KfrB PF18790.1 ORF452 - 0.12 12.6 0.3 0.28 11.4 0.3 1.6 1 0 0 1 1 1 0 KfrB protein DUF4211 PF13926.6 ORF42622 - 0.019 15.0 0.3 0.019 15.0 0.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4211) Pkinase PF00069.25 ORF41328 - 1.6e-29 103.1 0.1 1.9e-29 102.9 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF41328 - 4.3e-20 72.1 0.0 4.7e-20 72.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF41328 - 3.7e-08 32.6 0.0 1e-07 31.1 0.0 1.6 1 1 1 2 2 2 1 Fungal protein kinase APH PF01636.23 ORF41328 - 0.00016 21.7 0.0 0.019 14.9 0.0 2.1 2 0 0 2 2 2 2 Phosphotransferase enzyme family PIP49_C PF12260.8 ORF41328 - 0.026 14.2 0.0 0.045 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 Pox_ser-thr_kin PF05445.11 ORF41328 - 0.077 12.0 0.1 0.1 11.5 0.1 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase zf-C2H2 PF00096.26 ORF38720 - 3.9e-11 42.8 19.1 0.00094 19.5 0.9 4.1 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF38720 - 2.3e-08 34.2 15.1 0.0053 17.5 0.7 4.3 4 0 0 4 4 4 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF38720 - 5.3e-05 23.5 4.4 0.0052 17.2 1.1 3.8 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_8 PF15909.5 ORF38720 - 0.01 16.1 10.8 0.011 16.1 5.2 2.6 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_6 PF13912.6 ORF38720 - 0.018 15.0 1.7 0.018 15.0 1.7 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger VKOR PF07884.14 ORF38720 - 0.024 14.8 0.9 1.4 9.2 0.0 3.0 3 1 1 4 4 4 0 Vitamin K epoxide reductase family zf_UBZ PF18439.1 ORF38720 - 0.026 14.1 0.4 0.065 12.8 0.4 1.7 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf_ZIC PF18366.1 ORF38720 - 0.21 11.7 4.1 4.3 7.5 0.5 2.5 1 1 1 2 2 2 0 Zic proteins zinc finger domain zf-C2H2_jaz PF12171.8 ORF38720 - 0.27 11.6 11.4 2.5 8.5 3.4 3.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding FOXP-CC PF16159.5 ORF38720 - 0.53 11.0 5.6 0.19 12.4 1.3 2.2 2 1 0 2 2 2 0 FOXP coiled-coil domain ABC1 PF03109.16 ORF36970 - 9.9e-13 48.3 0.0 1.5e-12 47.7 0.0 1.3 1 0 0 1 1 1 1 ABC1 family pPIWI_RE_REase PF18154.1 ORF36134 - 0.036 14.0 0.1 0.19 11.7 0.0 1.9 1 1 1 2 2 2 0 REase associating with pPIWI_RE Cob_adeno_trans PF01923.18 ORF34265 - 2.2e-54 184.0 0.0 2.7e-54 183.7 0.0 1.1 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Mob1_phocein PF03637.17 ORF34196 - 1.9e-70 236.2 1.0 2.3e-70 236.0 1.0 1.1 1 0 0 1 1 1 1 Mob1/phocein family DUF5595 PF18077.1 ORF34196 - 0.35 11.0 0.1 0.35 11.0 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF5595) SIMPL PF04402.14 ORF30068 - 1.4e-44 153.0 6.9 1.6e-44 152.8 6.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF541) DUF1611_N PF17396.2 ORF30068 - 0.0027 17.9 0.1 0.019 15.2 0.0 2.2 2 1 0 2 2 2 1 Domain of unknown function (DUF1611_N) Rossmann-like domain zf-C2H2 PF00096.26 ORF27234 - 3.9e-11 42.8 19.1 0.00094 19.5 0.9 4.1 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF27234 - 2.3e-08 34.2 15.1 0.0053 17.5 0.7 4.3 4 0 0 4 4 4 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF27234 - 5.3e-05 23.5 4.4 0.0052 17.2 1.1 3.8 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_8 PF15909.5 ORF27234 - 0.01 16.1 10.8 0.011 16.1 5.2 2.6 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_6 PF13912.6 ORF27234 - 0.018 15.0 1.7 0.018 15.0 1.7 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger VKOR PF07884.14 ORF27234 - 0.024 14.8 0.9 1.4 9.2 0.0 3.0 3 1 1 4 4 4 0 Vitamin K epoxide reductase family zf_UBZ PF18439.1 ORF27234 - 0.026 14.1 0.4 0.065 12.8 0.4 1.7 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf_ZIC PF18366.1 ORF27234 - 0.21 11.7 4.1 4.3 7.5 0.5 2.5 1 1 1 2 2 2 0 Zic proteins zinc finger domain zf-C2H2_jaz PF12171.8 ORF27234 - 0.27 11.6 11.4 2.5 8.5 3.4 3.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding FOXP-CC PF16159.5 ORF27234 - 0.53 11.0 5.6 0.19 12.4 1.3 2.2 2 1 0 2 2 2 0 FOXP coiled-coil domain Ank_2 PF12796.7 ORF24931 - 4.9e-36 123.2 11.6 4.9e-13 49.5 0.2 4.0 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF24931 - 1.3e-31 108.5 6.5 6e-12 45.8 0.1 5.2 2 1 4 6 6 6 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF24931 - 1.6e-21 74.1 1.0 0.0028 18.0 0.0 6.7 7 0 0 7 7 7 5 Ankyrin repeat Ank_5 PF13857.6 ORF24931 - 1.3e-20 73.1 11.6 7.9e-09 35.6 0.0 6.1 1 1 5 6 6 6 6 Ankyrin repeats (many copies) Ank PF00023.30 ORF24931 - 4.4e-20 71.2 4.9 0.0032 17.8 0.0 6.9 7 0 0 7 7 7 5 Ankyrin repeat YlzJ PF14035.6 ORF24931 - 0.018 15.2 0.0 35 4.7 0.0 4.0 4 1 1 5 5 5 0 YlzJ-like protein I-EGF_1 PF18372.1 ORF23616 - 1.2 9.3 5.8 15 5.8 0.2 3.5 3 0 0 3 3 3 0 Integrin beta epidermal growth factor like domain 1 2-oxoacid_dh PF00198.23 ORF23611 - 3.5e-65 219.7 0.0 3.9e-65 219.6 0.0 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CTD_bind PF04818.13 ORF2238 - 0.062 14.1 1.8 0.37 11.6 0.4 2.8 1 1 3 4 4 4 0 RNA polymerase II-binding domain. TCTP PF00838.17 ORF2238 - 0.15 12.4 10.6 0.062 13.6 6.2 2.2 1 1 1 2 2 2 0 Translationally controlled tumour protein PARP PF00644.20 ORF20736 - 6e-21 74.9 0.7 9.5e-19 67.7 0.7 2.1 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain CD99L2 PF12301.8 ORF19620 - 0.045 14.0 0.7 0.066 13.5 0.7 1.2 1 0 0 1 1 1 0 CD99 antigen like protein 2 CCDC50_N PF15295.6 ORF19620 - 0.96 9.6 9.7 0.074 13.2 3.3 2.3 1 1 2 3 3 3 0 Coiled-coil domain-containing protein 50 N-terminus PH_8 PF15409.6 ORF18785 - 0.00032 20.9 1.0 0.00032 20.9 1.0 2.4 2 0 0 2 2 2 1 Pleckstrin homology domain PH PF00169.29 ORF18785 - 0.0014 19.1 1.8 0.0014 19.1 1.8 2.3 2 1 0 2 2 2 1 PH domain PH_3 PF14593.6 ORF18785 - 0.0084 16.2 4.0 0.01 15.9 1.1 2.5 2 1 0 2 2 2 1 PH domain Glycos_transf_1 PF00534.20 ORF17709 - 2.4e-38 131.3 0.0 2.9e-38 131.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF17709 - 2.9e-16 60.1 0.0 3.8e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF17709 - 0.00097 19.5 0.1 0.002 18.5 0.1 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycogen_syn PF05693.13 ORF17709 - 0.12 10.9 0.0 3.8 5.9 0.0 2.0 2 0 0 2 2 2 0 Glycogen synthase zf-CCCH_6 PF18585.1 ORF17709 - 0.14 12.0 0.0 0.33 10.9 0.0 1.6 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 Ac76 PF05814.11 ORF152814 - 0.055 13.5 5.5 1.3 9.0 0.2 2.3 2 0 0 2 2 2 0 Orf76 (Ac76) Tetraspanin PF00335.20 ORF152814 - 1.8 8.2 7.3 0.7 9.6 3.1 2.2 1 1 0 1 1 1 0 Tetraspanin family DUF2070 PF09843.9 ORF152814 - 5.2 5.2 9.9 6.8 4.8 9.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) zf-C2H2 PF00096.26 ORF15253 - 3.9e-11 42.8 19.1 0.00094 19.5 0.9 4.1 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF15253 - 2.3e-08 34.2 15.1 0.0053 17.5 0.7 4.3 4 0 0 4 4 4 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF15253 - 5.3e-05 23.5 4.4 0.0052 17.2 1.1 3.8 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_8 PF15909.5 ORF15253 - 0.01 16.1 10.8 0.011 16.1 5.2 2.6 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_6 PF13912.6 ORF15253 - 0.018 15.0 1.7 0.018 15.0 1.7 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger VKOR PF07884.14 ORF15253 - 0.024 14.8 0.9 1.4 9.2 0.0 3.0 3 1 1 4 4 4 0 Vitamin K epoxide reductase family zf_UBZ PF18439.1 ORF15253 - 0.026 14.1 0.4 0.065 12.8 0.4 1.7 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf_ZIC PF18366.1 ORF15253 - 0.21 11.7 4.1 4.3 7.5 0.5 2.5 1 1 1 2 2 2 0 Zic proteins zinc finger domain zf-C2H2_jaz PF12171.8 ORF15253 - 0.27 11.6 11.4 2.5 8.5 3.4 3.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding FOXP-CC PF16159.5 ORF15253 - 0.53 11.0 5.6 0.19 12.4 1.3 2.2 2 1 0 2 2 2 0 FOXP coiled-coil domain RAP PF08373.10 ORF149849 - 0.0023 18.0 0.0 0.0034 17.4 0.0 1.2 1 0 0 1 1 1 1 RAP domain DUF4769 PF15992.5 ORF149426 - 0.32 10.7 2.7 0.14 11.9 0.6 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4769) Glyco_transf_4 PF13439.6 ORF148758 - 1.3e-09 38.3 0.0 1.6e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Ntox5 PF15543.6 ORF145310 - 0.11 12.3 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial toxin 5 UBD PF16455.5 ORF139856 - 4.4e-14 52.6 0.0 7.2e-14 51.9 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-binding domain ubiquitin PF00240.23 ORF139856 - 2.9e-05 23.7 0.0 4.8e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family CD99L2 PF12301.8 ORF137913 - 0.045 14.0 0.7 0.066 13.5 0.7 1.2 1 0 0 1 1 1 0 CD99 antigen like protein 2 CCDC50_N PF15295.6 ORF137913 - 0.96 9.6 9.7 0.074 13.2 3.3 2.3 1 1 2 3 3 3 0 Coiled-coil domain-containing protein 50 N-terminus RNase_PH PF01138.21 ORF137015 - 0.00027 21.4 0.0 0.00036 21.0 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 WD40 PF00400.32 ORF133777 - 6.1e-07 30.0 0.1 1.2e-06 29.1 0.1 1.5 1 0 0 1 1 1 1 WD domain, G-beta repeat TrmO PF01980.16 ORF132103 - 4.6e-46 155.9 0.0 8e-46 155.1 0.0 1.4 1 0 0 1 1 1 1 tRNA-methyltransferase O TrmO_C PF18389.1 ORF132103 - 1.1e-23 83.1 0.1 1.6e-23 82.6 0.1 1.3 1 0 0 1 1 1 1 TrmO C-terminal domain Aldo_ket_red PF00248.21 ORF129039 - 6.6e-18 64.9 0.0 4.1e-16 59.0 0.0 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Ribosomal_60s PF00428.19 ORF129039 - 2.1 9.0 9.2 5.2 7.7 9.2 1.8 1 1 0 1 1 1 0 60s Acidic ribosomal protein DHHA1 PF02272.19 ORF125399 - 6.4e-33 114.1 3.2 9.2e-33 113.6 3.2 1.2 1 0 0 1 1 1 1 DHHA1 domain tRNA_SAD PF07973.14 ORF125399 - 8e-19 67.5 0.2 1.7e-18 66.5 0.2 1.6 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Leu_zip PF15294.6 ORF125399 - 0.00089 18.9 0.5 0.0012 18.5 0.5 1.1 1 0 0 1 1 1 1 Leucine zipper DUF1319 PF07028.11 ORF125399 - 0.0012 19.0 0.2 0.0017 18.6 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1319) DUF3573 PF12097.8 ORF125399 - 0.0084 15.0 0.1 0.01 14.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3573) Spc7 PF08317.11 ORF125399 - 0.029 13.3 1.1 0.037 12.9 1.1 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein HypA PF01155.19 ORF125399 - 0.19 11.8 0.3 0.36 10.9 0.1 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Metal_resist PF13801.6 ORF125399 - 0.86 9.8 6.6 0.66 10.2 0.7 2.2 2 0 0 2 2 2 0 Heavy-metal resistance TBCC PF07986.12 ORF122705 - 0.0011 18.7 0.0 0.0019 18.0 0.0 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C DUF4116 PF13475.6 ORF115763 - 4.3e-30 103.2 0.0 2.6e-09 36.6 0.0 4.5 4 0 0 4 4 4 4 Domain of unknown function (DUF4116) Robl_LC7 PF03259.17 ORF115763 - 0.018 14.8 4.1 2.6 7.9 0.5 3.0 2 1 1 3 3 3 0 Roadblock/LC7 domain CdhD PF03599.16 ORF115763 - 0.039 12.7 0.1 0.054 12.2 0.1 1.2 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit Acetyltransf_1 PF00583.25 ORF115653 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF115653 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF115653 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF115653 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF115653 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF115653 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF115653 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF115653 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF115653 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF115653 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain zf-C2H2 PF00096.26 ORF114920 - 3.9e-11 42.8 19.1 0.00094 19.5 0.9 4.1 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF114920 - 2.3e-08 34.2 15.1 0.0053 17.5 0.7 4.3 4 0 0 4 4 4 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF114920 - 5.3e-05 23.5 4.4 0.0052 17.2 1.1 3.8 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_8 PF15909.5 ORF114920 - 0.01 16.1 10.8 0.011 16.1 5.2 2.6 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_6 PF13912.6 ORF114920 - 0.018 15.0 1.7 0.018 15.0 1.7 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger VKOR PF07884.14 ORF114920 - 0.024 14.8 0.9 1.4 9.2 0.0 3.0 3 1 1 4 4 4 0 Vitamin K epoxide reductase family zf_UBZ PF18439.1 ORF114920 - 0.026 14.1 0.4 0.065 12.8 0.4 1.7 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger zf_ZIC PF18366.1 ORF114920 - 0.21 11.7 4.1 4.3 7.5 0.5 2.5 1 1 1 2 2 2 0 Zic proteins zinc finger domain zf-C2H2_jaz PF12171.8 ORF114920 - 0.27 11.6 11.4 2.5 8.5 3.4 3.3 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding FOXP-CC PF16159.5 ORF114920 - 0.53 11.0 5.6 0.19 12.4 1.3 2.2 2 1 0 2 2 2 0 FOXP coiled-coil domain Dak2 PF02734.17 ORF114702 - 1e-55 188.3 0.4 1.3e-55 188.0 0.4 1.1 1 0 0 1 1 1 1 DAK2 domain Acetyltransf_1 PF00583.25 ORF113907 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF113907 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF113907 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF113907 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF113907 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF113907 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF113907 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF113907 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF113907 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF113907 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain HMG_box PF00505.19 ORF11232 - 9e-20 70.9 15.0 9.7e-15 54.7 5.1 4.3 4 1 0 4 4 4 2 HMG (high mobility group) box HMG_box_2 PF09011.10 ORF11232 - 1.2e-18 67.4 16.9 4e-15 56.2 4.1 3.4 3 2 0 3 3 3 2 HMG-box domain HMG_box_5 PF14887.6 ORF11232 - 3e-05 23.9 4.0 3e-05 23.9 4.0 3.8 1 1 2 4 4 4 2 HMG (high mobility group) box 5 B12-binding_2 PF02607.17 ORF11232 - 0.11 12.9 0.0 17 5.9 0.0 2.5 2 0 0 2 2 2 0 B12 binding domain YlqD PF11068.8 ORF11232 - 2.1 8.7 17.6 3.4 8.0 11.6 2.4 1 1 1 2 2 2 0 YlqD protein DUF1825 PF08855.10 ORF11232 - 2.3 8.2 8.0 0.45 10.5 0.7 2.9 2 1 0 3 3 3 0 Domain of unknown function (DUF1825) PhageMin_Tail PF10145.9 ORF11232 - 5.2 6.9 10.8 1.7 8.5 2.1 2.6 2 1 1 3 3 3 0 Phage-related minor tail protein TRP PF06011.12 ORF110572 - 0.0031 16.3 15.8 0.023 13.5 15.6 1.9 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel EphA2_TM PF14575.6 ORF110572 - 0.016 16.0 6.5 3.8 8.5 0.2 3.4 2 1 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain Shisa PF13908.6 ORF110572 - 0.036 14.3 0.2 0.036 14.3 0.2 2.6 3 0 0 3 3 3 0 Wnt and FGF inhibitory regulator DUF1634 PF07843.11 ORF110572 - 0.08 13.0 2.6 0.09 12.9 0.5 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1634) TMEM132D_C PF15706.5 ORF110572 - 0.1 12.4 0.3 0.1 12.4 0.3 2.8 2 1 1 3 3 3 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term Sulfate_transp PF00916.20 ORF110572 - 0.47 9.1 5.8 1.4 7.6 5.3 1.8 1 1 1 2 2 2 0 Sulfate permease family BatA PF07584.11 ORF110572 - 1.8 9.0 4.3 2.6 8.5 0.1 2.6 3 1 0 3 3 3 0 Aerotolerance regulator N-terminal Cadherin_C_2 PF16492.5 ORF110572 - 2.5 8.9 20.9 40 5.0 2.7 3.5 1 1 1 2 2 2 0 Cadherin cytoplasmic C-terminal Mob1_phocein PF03637.17 ORF108119 - 6.4e-69 231.3 3.5 7.7e-69 231.0 3.5 1.1 1 0 0 1 1 1 1 Mob1/phocein family zf-C2H2 PF00096.26 ORF107382 - 2.9e-11 43.2 19.3 0.0014 19.0 0.7 3.8 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 ORF107382 - 1.6e-07 31.5 20.2 2.2e-06 27.8 0.6 4.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 ORF107382 - 2.9e-05 24.5 26.2 0.019 15.8 0.7 4.2 5 0 0 5 5 5 3 C2H2-type zinc finger zf-C2H2_8 PF15909.5 ORF107382 - 0.27 11.6 8.2 6.5 7.1 3.8 2.5 1 1 1 2 2 2 0 C2H2-type zinc ribbon zf-C2H2_jaz PF12171.8 ORF107382 - 0.77 10.1 7.2 2.8 8.3 0.4 2.8 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_aberr PF17017.5 ORF107382 - 0.87 9.7 6.3 8.1 6.5 0.6 2.4 1 1 0 2 2 2 0 Aberrant zinc-finger zf-C2H2_6 PF13912.6 ORF107382 - 2.6 8.2 14.7 1.1 9.4 2.5 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger Acetyltransf_1 PF00583.25 ORF107004 - 1.8e-14 53.9 0.0 3.3e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 ORF107004 - 2.8e-13 49.9 0.5 6.7e-13 48.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 ORF107004 - 1e-11 45.1 0.2 3.4e-11 43.4 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 ORF107004 - 9.2e-06 25.5 0.1 6e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 ORF107004 - 0.00086 18.8 2.4 0.0084 15.5 0.0 2.3 2 1 0 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 ORF107004 - 0.0042 16.8 0.0 0.0071 16.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_13 PF13880.6 ORF107004 - 0.0073 16.3 0.0 0.027 14.4 0.0 1.9 2 0 0 2 2 2 1 ESCO1/2 acetyl-transferase Acetyltransf_CG PF14542.6 ORF107004 - 0.0082 16.3 0.0 0.017 15.2 0.0 1.5 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 ORF107004 - 0.1 12.7 0.2 0.74 9.9 0.1 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain BRICHOS PF04089.14 ORF107004 - 0.1 12.9 1.3 0.38 11.0 0.0 2.4 2 2 0 3 3 3 0 BRICHOS domain PARP PF00644.20 ORF106476 - 0.026 14.1 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 Poly(ADP-ribose) polymerase catalytic domain PHP_C PF13263.6 ORF106476 - 0.14 11.9 0.2 0.41 10.4 0.2 1.7 2 0 0 2 2 2 0 PHP-associated Neurokinin_B PF03823.14 ORF102670 - 0.098 12.7 0.0 0.27 11.3 0.0 1.8 1 1 0 1 1 1 0 Neurokinin B Spt20 PF12090.8 NODE_31051_length_701_cov_91.935435_g24580_i0forward_frame_1 - 1.8 8.1 12.5 3.1 7.4 12.5 1.5 1 0 0 1 1 1 0 Spt20 family Flavodoxin_NdrI PF07972.11 NODE_31011_length_702_cov_51.242879_g24545_i0forward_frame_1 - 0.13 12.5 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 NrdI Flavodoxin like RNA_pol_Rpb1_R PF05001.13 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_3 - 2.7 8.5 8.9 1.5 9.3 3.0 3.1 3 0 0 3 3 3 0 RNA polymerase Rpb1 C-terminal repeat BssS PF13991.6 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 2.7e-30 104.2 0.0 4.3e-30 103.6 0.0 1.3 1 0 0 1 1 1 1 BssS protein family DAO PF01266.24 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 3.4e-14 53.2 0.1 4.1e-14 52.9 0.1 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.003 16.8 0.0 0.0049 16.1 0.0 1.3 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.7 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.013 14.9 0.6 0.019 14.3 0.6 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.023 14.9 0.1 0.045 14.0 0.1 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.023 13.9 0.0 0.028 13.7 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.043 12.9 0.0 0.06 12.4 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain GIDA PF01134.22 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.043 12.9 0.1 0.056 12.5 0.1 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A 3HCDH_N PF02737.18 NODE_30973_length_703_cov_2.428144_g24514_i0reverse_frame_2 - 0.22 11.4 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pet100 PF09803.9 NODE_30958_length_703_cov_90.097305_g24499_i0reverse_frame_3 - 0.13 12.8 0.2 0.21 12.1 0.2 1.3 1 0 0 1 1 1 0 Pet100 IHO1 PF15771.5 NODE_30943_length_703_cov_486.997006_g24486_i0reverse_frame_3 - 3.6 6.2 8.8 5 5.8 8.8 1.1 1 0 0 1 1 1 0 Interactor of HORMAD1 protein 1 DUF2987 PF11205.8 NODE_30903_length_704_cov_207.049327_g24451_i0reverse_frame_2 - 0.14 12.1 0.0 0.22 11.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2987) Pox_F11 PF04943.12 NODE_30882_length_705_cov_61.874627_g23847_i1reverse_frame_3 - 0.16 11.0 0.5 0.21 10.7 0.5 1.1 1 0 0 1 1 1 0 Poxvirus F11 protein Basic PF01586.16 NODE_30882_length_705_cov_61.874627_g23847_i1reverse_frame_3 - 0.41 11.8 7.2 0.9 10.8 7.2 1.5 1 0 0 1 1 1 0 Myogenic Basic domain PRP4 PF08799.11 NODE_30881_length_705_cov_67.728358_g24435_i0forward_frame_2 - 0.2 11.2 0.7 0.54 9.9 0.0 2.0 2 0 0 2 2 2 0 pre-mRNA processing factor 4 (PRP4) like Asp PF00026.23 NODE_30864_length_705_cov_191.528358_g18833_i1reverse_frame_2 - 0.0031 17.0 0.2 0.0062 16.0 0.1 1.4 1 1 0 2 2 2 1 Eukaryotic aspartyl protease eIF-3c_N PF05470.12 NODE_30853_length_705_cov_399.859701_g24412_i0forward_frame_3 - 0.018 13.4 0.0 0.018 13.4 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus GSK-3_bind PF05350.12 ORF97198 - 0.14 11.5 2.7 0.16 11.3 2.0 1.5 1 1 0 1 1 1 0 Glycogen synthase kinase-3 binding PDZ_6 PF17820.1 ORF92714 - 2.2e-05 24.2 0.0 0.22 11.4 0.0 2.5 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF92714 - 0.0069 16.7 0.1 4.1 7.8 0.0 2.8 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF92714 - 0.014 15.7 0.0 3.6 8.0 0.0 2.4 2 0 0 2 2 2 0 PDZ domain Erv26 PF04148.13 ORF90590 - 0.03 14.1 0.1 0.052 13.4 0.1 1.3 1 0 0 1 1 1 0 Transmembrane adaptor Erv26 Asp PF00026.23 ORF89969 - 5.4e-10 39.2 0.0 6.2e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease zf-CCCH PF00642.24 ORF89399 - 0.01 15.8 3.8 0.1 12.6 0.4 3.3 3 0 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) GST_N PF02798.20 ORF88926 - 2.9e-14 53.2 0.1 4.7e-14 52.5 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF88926 - 1.7e-12 47.5 0.0 3e-12 46.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF88926 - 6e-06 26.4 0.0 1.2e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF88926 - 1.2e-05 25.5 0.0 2.1e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF88926 - 0.013 15.7 0.0 0.025 14.8 0.0 1.7 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF88926 - 0.017 15.1 0.0 0.039 14.0 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain UPF0300 PF08594.10 ORF88926 - 0.16 11.2 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0300) Porin_1 PF00267.21 ORF85327 - 1.2e-85 287.9 14.8 1.4e-85 287.8 14.8 1.0 1 0 0 1 1 1 1 Gram-negative porin Porin_4 PF13609.6 ORF85327 - 1.2e-10 41.7 23.0 1.7e-10 41.2 23.0 1.1 1 0 0 1 1 1 1 Gram-negative porin OMP_b-brl PF13505.6 ORF85327 - 0.0033 17.6 25.2 0.026 14.6 25.2 2.0 1 1 0 1 1 1 1 Outer membrane protein beta-barrel domain MORN PF02493.20 ORF84342 - 0.00013 21.6 5.3 0.0089 15.9 0.2 4.2 5 0 0 5 5 5 2 MORN repeat HEPN_RnaseLS PF18869.1 ORF84342 - 0.029 14.5 0.1 0.16 12.0 0.0 2.2 1 1 2 3 3 3 0 RnaseLS-like HEPN MMR_HSR1 PF01926.23 ORF83896 - 2.4e-24 85.6 0.0 4e-24 84.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF83896 - 5.1e-09 35.8 0.0 5.6e-08 32.5 0.0 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B Gtr1_RagA PF04670.12 ORF83896 - 0.003 17.0 0.0 0.0042 16.5 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region ATP_bind_1 PF03029.17 ORF83896 - 0.0051 16.6 0.0 2.6 7.8 0.0 2.3 1 1 1 2 2 2 2 Conserved hypothetical ATP binding protein MeaB PF03308.16 ORF83896 - 0.014 14.4 0.1 0.7 8.8 0.0 2.1 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1_Xtn PF16897.5 ORF83896 - 0.051 13.6 0.0 0.087 12.8 0.0 1.4 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain RsgA_GTPase PF03193.16 ORF83896 - 0.093 12.6 0.0 0.79 9.6 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase cobW PF02492.19 ORF83896 - 0.15 11.7 0.0 1.4 8.5 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain LRR_6 PF13516.6 ORF82676 - 5.5e-13 47.8 19.2 4.4e-05 23.2 0.3 8.2 8 1 0 8 8 8 5 Leucine Rich repeat LRR_8 PF13855.6 ORF82676 - 0.0019 17.9 5.8 2.1 8.2 0.3 5.3 2 1 3 5 5 5 3 Leucine rich repeat LRR_4 PF12799.7 ORF82676 - 0.0076 16.6 2.5 5.1 7.6 0.1 4.6 4 2 1 5 5 5 2 Leucine Rich repeats (2 copies) Ribosomal_L1 PF00687.21 ORF79976 - 1.7e-52 178.1 0.2 2.2e-52 177.8 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family ATP-synt_ab PF00006.25 ORF75594 - 6.8e-15 55.3 0.1 9.3e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain NACHT PF05729.12 ORF75594 - 0.085 12.8 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 NACHT domain Ion_trans PF00520.31 ORF73884 - 0.0013 18.0 7.7 0.0016 17.7 7.7 1.2 1 0 0 1 1 1 1 Ion transport protein DUF4271 PF14093.6 ORF73884 - 0.044 13.7 3.9 0.09 12.7 3.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) DUF1917 PF08939.10 ORF73884 - 0.046 13.6 1.7 0.064 13.2 1.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1917) CLZ PF16526.5 ORF73884 - 0.23 11.8 5.6 1.4 9.3 0.4 2.9 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF3800 PF12686.7 ORF73884 - 3 8.5 5.0 0.89 10.2 0.6 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3800) AcrZ PF10766.9 ORF73884 - 7.6 6.2 7.6 0.35 10.5 1.0 2.1 2 0 0 2 2 2 0 Multidrug efflux pump-associated protein AcrZ HemY_N PF07219.13 ORF71232 - 5 7.4 10.7 0.12 12.6 1.7 2.4 2 0 0 2 2 2 0 HemY protein N-terminus Ras PF00071.22 ORF71120 - 4.2e-52 176.0 0.1 5.3e-52 175.7 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF71120 - 1.4e-31 109.2 0.0 2.5e-31 108.4 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF71120 - 3e-12 46.3 0.1 4.6e-12 45.7 0.1 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF71120 - 3e-05 24.1 0.1 8.9e-05 22.5 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF71120 - 0.00019 21.1 0.1 0.00072 19.2 0.1 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 ORF71120 - 0.00081 18.8 0.0 0.0012 18.2 0.0 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF71120 - 0.0026 17.7 0.0 1.4 8.8 0.0 2.5 1 1 2 3 3 3 2 RsgA GTPase SRPRB PF09439.10 ORF71120 - 0.01 15.3 1.7 0.087 12.3 0.0 2.2 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 ORF71120 - 0.016 15.6 0.0 0.029 14.8 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Septin PF00735.18 ORF71120 - 0.017 14.4 0.6 0.048 12.9 0.1 1.9 2 1 0 2 2 2 0 Septin AAA_14 PF13173.6 ORF71120 - 0.06 13.4 0.1 0.11 12.5 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 ORF71120 - 0.14 12.5 0.1 0.37 11.1 0.0 1.9 1 1 1 2 2 2 0 AAA domain Occludin_ELL PF07303.13 ORF65880 - 9 7.1 17.8 0.19 12.5 9.5 2.4 2 2 0 2 2 2 0 Occludin homology domain SAP PF02037.27 ORF65638 - 1.4e-07 31.1 0.1 2.5e-07 30.3 0.1 1.5 1 0 0 1 1 1 1 SAP domain DUF2761 PF10959.8 ORF65638 - 0.18 11.8 0.0 0.4 10.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2761) CheB_methylest PF01339.17 ORF63992 - 1.5e-62 210.3 0.2 1.8e-62 210.0 0.2 1.1 1 0 0 1 1 1 1 CheB methylesterase zf-C3HC4 PF00097.25 ORF63808 - 6.8e-09 35.5 15.1 1.4e-08 34.4 12.2 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF63808 - 2.6e-08 33.6 8.2 4.7e-08 32.8 8.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF63808 - 1.1e-07 31.5 10.9 1.1e-07 31.5 10.9 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF63808 - 1.9e-07 31.3 9.6 4.2e-07 30.2 9.6 1.6 1 0 0 1 1 1 1 Ring finger domain Prok-RING_4 PF14447.6 ORF63808 - 1.8e-05 24.5 7.9 4.1e-05 23.3 7.9 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 ORF63808 - 0.00054 20.1 11.7 0.00054 20.1 11.7 1.7 2 0 0 2 2 1 1 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF63808 - 0.0007 19.6 2.0 0.0022 18.0 2.0 1.9 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 ORF63808 - 0.00073 19.5 7.7 0.0011 19.0 5.4 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_4 PF14570.6 ORF63808 - 0.0009 19.0 4.8 0.0023 17.7 4.8 1.7 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain YEATS PF03366.16 ORF63808 - 0.0011 18.9 0.2 0.003 17.5 0.2 1.7 1 0 0 1 1 1 1 YEATS family zf-RING_5 PF14634.6 ORF63808 - 0.0031 17.5 11.8 0.0031 17.5 11.8 2.4 2 1 1 3 3 3 1 zinc-RING finger domain zf-RING_10 PF16685.5 ORF63808 - 0.0062 16.6 4.3 0.017 15.2 4.3 1.8 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-UDP PF14569.6 ORF63808 - 0.0078 16.3 3.0 0.017 15.3 3.0 1.5 1 0 0 1 1 1 1 Zinc-binding RING-finger U-box PF04564.15 ORF63808 - 0.021 15.0 0.0 0.049 13.8 0.0 1.6 1 0 0 1 1 1 0 U-box domain zf-Nse PF11789.8 ORF63808 - 0.054 13.3 8.0 0.11 12.3 8.0 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-rbx1 PF12678.7 ORF63808 - 0.058 13.7 13.3 0.054 13.8 10.2 2.4 2 1 0 2 2 2 0 RING-H2 zinc finger domain Prenyltransf PF01255.19 ORF63808 - 0.1 12.1 0.1 0.15 11.6 0.1 1.2 1 0 0 1 1 1 0 Putative undecaprenyl diphosphate synthase zf-RING-like PF08746.11 ORF63808 - 0.24 11.7 7.1 0.56 10.6 7.1 1.7 1 0 0 1 1 1 0 RING-like domain SPRY PF00622.28 ORF62178 - 0.0014 18.7 0.0 0.0023 18.0 0.0 1.3 1 0 0 1 1 1 1 SPRY domain DUF4389 PF14333.6 ORF61838 - 0.2 11.6 0.1 0.35 10.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4389) Proteasome PF00227.26 ORF61221 - 2.6e-57 193.4 0.1 3.1e-57 193.2 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF61221 - 0.0012 18.4 2.4 0.0013 18.3 0.0 2.1 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Lig_chan PF00060.26 ORF59742 - 0.053 13.4 0.1 0.094 12.6 0.1 1.4 1 0 0 1 1 1 0 Ligand-gated ion channel DUF5336 PF17270.2 ORF59742 - 0.15 11.7 0.0 0.22 11.1 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5336) CPBP PF02517.16 ORF56468 - 0.00021 21.6 9.4 0.00021 21.6 9.4 2.3 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease CsbD PF05532.12 ORF55702 - 2.6 8.0 15.7 0.081 12.8 1.5 4.0 3 1 1 4 4 4 0 CsbD-like P66_CC PF16563.5 ORF51809 - 0.075 12.7 0.5 0.16 11.6 0.5 1.5 1 0 0 1 1 1 0 Coiled-coil and interaction region of P66A and P66B with MBD2 PHR PF08005.12 ORF49405 - 4.7e-20 72.8 3.2 6.4e-20 72.3 3.2 1.2 1 0 0 1 1 1 1 PHR domain Imp-YgjV PF10688.9 ORF47306 - 3.5 7.4 8.7 0.93 9.3 5.8 1.7 2 0 0 2 2 2 0 Bacterial inner membrane protein PDZ_6 PF17820.1 ORF46490 - 2.2e-05 24.2 0.0 0.22 11.4 0.0 2.5 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 ORF46490 - 0.0069 16.7 0.1 4.1 7.8 0.0 2.8 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 ORF46490 - 0.014 15.7 0.0 3.6 8.0 0.0 2.4 2 0 0 2 2 2 0 PDZ domain FAM124 PF15067.6 ORF39448 - 0.18 11.4 0.0 0.25 10.9 0.0 1.2 1 0 0 1 1 1 0 FAM124 family PDZ_6 PF17820.1 ORF37696 - 0.023 14.6 0.1 0.55 10.1 0.0 2.3 2 0 0 2 2 2 0 PDZ domain GOLD_2 PF13897.6 ORF37535 - 0.072 13.6 0.3 0.15 12.5 0.3 1.5 1 0 0 1 1 1 0 Golgi-dynamics membrane-trafficking VESA1_N PF12785.7 ORF33599 - 0.03 13.3 0.2 0.03 13.3 0.2 1.5 2 0 0 2 2 2 0 Variant erythrocyte surface antigen-1 Nnf1 PF03980.14 ORF33599 - 0.11 12.8 0.5 5.8 7.3 0.0 2.4 1 1 1 2 2 2 0 Nnf1 RAMP4 PF06624.12 ORF33599 - 0.27 11.3 1.7 0.66 10.1 1.7 1.6 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 Cwf_Cwc_15 PF04889.12 ORF33335 - 7.7e-54 183.0 28.0 8.7e-54 182.9 28.0 1.0 1 0 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein PA26 PF04636.13 ORF33335 - 0.11 11.4 7.7 0.12 11.3 7.7 1.3 1 0 0 1 1 1 0 PA26 p53-induced protein (sestrin) Pentapeptide PF00805.22 ORF299 - 5.9e-38 128.1 22.7 4.7e-07 29.3 0.4 7.1 2 2 4 8 8 8 8 Pentapeptide repeats (8 copies) Pentapeptide_4 PF13599.6 ORF299 - 3.6e-22 78.3 2.1 4.4e-06 26.8 0.0 3.8 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) Pentapeptide_3 PF13576.6 ORF299 - 4.2e-15 55.6 0.0 0.0074 16.4 0.1 5.6 1 1 3 4 4 4 4 Pentapeptide repeats (9 copies) Ank_2 PF12796.7 ORF26577 - 2.9e-23 82.3 2.6 6.4e-15 55.5 0.5 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 ORF26577 - 2.5e-13 50.2 0.0 3.2e-06 27.6 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF26577 - 2.9e-11 42.5 0.0 0.0021 18.4 0.0 3.5 3 0 0 3 3 3 3 Ankyrin repeat Ank PF00023.30 ORF26577 - 7.9e-11 41.9 0.2 0.00048 20.5 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 ORF26577 - 3.7e-10 39.8 0.6 0.00032 20.9 0.1 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) DUF2170 PF09938.9 ORF26577 - 0.11 12.2 0.0 12 5.6 0.0 2.5 1 1 2 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2170) CLN3 PF02487.17 ORF24940 - 0.11 11.5 0.9 0.13 11.3 0.1 1.5 1 1 1 2 2 2 0 CLN3 protein DUF4092 PF13322.6 ORF24940 - 0.12 12.2 1.8 0.27 11.1 1.6 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4092) Stig1 PF04885.13 ORF24940 - 8.4 6.9 7.2 2.2 8.7 3.6 1.8 2 0 0 2 2 2 0 Stigma-specific protein, Stig1 GST_N PF02798.20 ORF22919 - 1e-16 61.0 0.1 1.6e-16 60.4 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF22919 - 3.8e-14 52.8 0.0 6.3e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF22919 - 1.7e-07 31.4 0.0 3e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF22919 - 3.4e-05 24.0 0.0 7.7e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF22919 - 0.035 14.1 0.0 0.091 12.8 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF22919 - 0.061 13.5 0.0 0.19 12.0 0.0 1.9 1 1 0 2 2 2 0 Glutathione S-transferase, C-terminal domain Glutaredoxin PF00462.24 ORF22919 - 0.063 13.5 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 Glutaredoxin Blt1_C PF17183.4 ORF17256 - 0.15 11.7 0.1 0.36 10.5 0.1 1.6 1 0 0 1 1 1 0 Get5 carboxyl domain SM-ATX PF14438.6 ORF152618 - 0.024 14.8 0.1 0.097 12.8 0.1 2.1 1 0 0 1 1 1 0 Ataxin 2 SM domain AAA_14 PF13173.6 ORF152618 - 2 8.5 6.4 0.68 10.0 2.7 2.1 2 1 1 3 3 3 0 AAA domain CSD PF00313.22 ORF145994 - 3.1e-12 46.1 0.1 2e-10 40.3 0.0 2.6 3 0 0 3 3 3 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF145994 - 0.041 13.6 0.0 0.24 11.1 0.0 2.0 2 0 0 2 2 2 0 Ribonuclease B OB domain MORN PF02493.20 ORF141627 - 2.5e-19 67.9 18.6 9.6e-08 31.5 0.6 5.0 4 1 0 4 4 4 4 MORN repeat MIP PF00230.20 ORF13930 - 3.2e-28 99.0 1.6 3.8e-28 98.7 1.6 1.1 1 0 0 1 1 1 1 Major intrinsic protein Ras PF00071.22 ORF137697 - 5.6e-06 26.1 8.2 0.00025 20.7 8.2 2.2 1 1 0 1 1 1 1 Ras family Arf PF00025.21 ORF137697 - 0.00056 19.4 6.7 0.0052 16.3 0.2 3.1 2 1 1 3 3 3 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF137697 - 0.0013 18.2 0.6 0.0013 18.2 0.6 1.8 2 1 0 2 2 2 1 Signal recognition particle receptor beta subunit AAA_18 PF13238.6 ORF137697 - 0.0024 18.4 2.0 0.14 12.7 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 ORF137697 - 0.0088 16.3 0.3 0.025 14.9 0.0 1.9 2 1 1 3 3 3 1 AAA domain PduV-EutP PF10662.9 ORF137697 - 0.021 14.6 0.7 0.021 14.6 0.7 1.9 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_14 PF13173.6 ORF137697 - 0.021 14.8 0.3 0.021 14.8 0.3 2.3 2 1 0 2 2 2 0 AAA domain Roc PF08477.13 ORF137697 - 0.038 14.2 5.9 0.15 12.3 2.9 2.6 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 ORF137697 - 0.43 9.7 12.0 1.4 8.0 12.0 1.8 1 1 0 1 1 1 0 G-protein alpha subunit AAA_24 PF13479.6 ORF137697 - 0.6 9.8 7.6 4 7.1 6.4 2.6 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF137697 - 1.1 9.3 4.2 2.9 8.0 4.2 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase UPF0054 PF02130.17 ORF13701 - 0.16 11.8 3.4 0.097 12.5 1.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein family UPF0054 Proteasome PF00227.26 ORF135765 - 2.6e-57 193.4 0.1 3.1e-57 193.2 0.1 1.0 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 ORF135765 - 0.00032 20.3 2.1 0.00042 19.9 0.0 2.1 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Ras PF00071.22 ORF134650 - 4.5e-05 23.1 8.5 0.0022 17.6 8.5 2.3 1 1 0 1 1 1 1 Ras family AAA_18 PF13238.6 ORF134650 - 0.00046 20.7 1.7 0.14 12.7 0.1 2.3 2 0 0 2 2 2 2 AAA domain SRPRB PF09439.10 ORF134650 - 0.0013 18.2 0.6 0.0013 18.2 0.6 1.8 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit Arf PF00025.21 ORF134650 - 0.0028 17.1 5.4 0.0052 16.3 0.2 2.7 2 1 1 3 3 3 1 ADP-ribosylation factor family AAA_28 PF13521.6 ORF134650 - 0.012 15.9 0.3 0.025 14.8 0.0 1.8 2 1 1 3 3 3 0 AAA domain PduV-EutP PF10662.9 ORF134650 - 0.015 15.0 2.5 0.021 14.6 0.7 2.1 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 ORF134650 - 0.019 15.2 4.6 0.14 12.4 2.8 2.6 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_14 PF13173.6 ORF134650 - 0.021 14.8 0.3 0.021 14.8 0.3 2.3 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.20 ORF134650 - 0.16 11.1 11.9 0.38 9.9 11.9 1.6 1 1 0 1 1 1 0 G-protein alpha subunit AAA_24 PF13479.6 ORF134650 - 0.42 10.3 7.2 4.9 6.8 6.9 2.4 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF134650 - 1.2 9.3 4.0 2.6 8.2 3.9 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase PTPLA PF04387.14 ORF132929 - 5.8e-30 104.2 5.8 9.2e-30 103.5 5.8 1.3 1 0 0 1 1 1 1 Protein tyrosine phosphatase-like protein, PTPLA TetR_N PF00440.23 ORF131425 - 4e-08 32.9 0.1 4e-08 32.9 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1 PF01527.20 ORF131425 - 0.0081 16.5 0.0 1.5 9.2 0.0 3.1 3 0 0 3 3 3 1 Transposase TetR_C_15 PF17918.1 ORF131425 - 0.011 16.5 2.8 0.011 16.5 2.8 2.0 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain Tetraspanin PF00335.20 ORF131344 - 0.00039 20.2 6.4 0.0014 18.3 6.6 2.1 1 1 0 1 1 1 1 Tetraspanin family NAD_binding_10 PF13460.6 ORF13129 - 0.017 15.0 0.0 4.4 7.2 0.0 2.2 1 1 1 2 2 2 0 NAD(P)H-binding TctB PF07331.11 ORF129847 - 7.3e-21 74.9 15.6 1e-20 74.4 15.6 1.2 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family HisKA_7TM PF16927.5 ORF129847 - 0.053 13.6 13.5 1.1 9.3 0.3 2.5 1 1 0 2 2 2 0 N-terminal 7TM region of histidine kinase DUF5065 PF16723.5 ORF128676 - 0.3 11.1 2.2 0.31 11.1 0.9 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF5065) Cu2_monooxygen PF01082.20 ORF127781 - 0.012 15.9 2.2 0.012 15.9 2.2 1.8 2 0 0 2 2 2 0 Copper type II ascorbate-dependent monooxygenase, N-terminal domain MCC-bdg_PDZ PF10506.9 ORF12731 - 0.061 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Dynein_C PF18199.1 ORF125373 - 6.4e-37 127.4 0.0 7.1e-37 127.3 0.0 1.0 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain DUF2087 PF09860.9 ORF125339 - 4.9e-08 33.0 0.0 7.5e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2087) DUF4606 PF15379.6 ORF125339 - 0.1 12.9 0.0 0.17 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4606) Cellulase PF00150.18 ORF121668 - 0.074 12.5 0.0 0.2 11.1 0.0 1.6 2 0 0 2 2 2 0 Cellulase (glycosyl hydrolase family 5) PgaD PF13994.6 ORF119182 - 0.029 14.4 0.0 0.053 13.6 0.0 1.4 1 0 0 1 1 1 0 PgaD-like protein Glyco_tran_28_C PF04101.16 ORF117709 - 8.3e-07 29.1 0.0 1.6e-06 28.2 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_4 PF13692.6 ORF117709 - 9.8e-05 22.8 0.1 0.00014 22.3 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 ORF117709 - 0.0061 16.1 0.0 0.0085 15.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_tran_WecB PF03808.13 ORF117709 - 0.13 12.2 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase WecB/TagA/CpsF family PK_C PF02887.16 ORF117709 - 0.14 12.4 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain Ish1 PF10281.9 ORF112905 - 0.15 12.4 0.4 0.15 12.4 0.4 1.8 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein TBX PF12598.8 ORF112018 - 0.024 15.4 0.3 0.048 14.5 0.3 1.5 1 0 0 1 1 1 0 T-box transcription factor YedD PF13987.6 ORF112018 - 0.082 12.7 0.1 0.29 11.0 0.0 1.9 2 0 0 2 2 2 0 YedD-like protein PTPLA PF04387.14 ORF109889 - 2.2e-31 108.8 4.7 2.2e-31 108.8 4.7 1.6 2 0 0 2 2 2 1 Protein tyrosine phosphatase-like protein, PTPLA DUF1624 PF07786.12 ORF109889 - 0.095 12.2 8.1 0.044 13.3 5.3 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1624) Esterase PF00756.20 ORF109133 - 3e-33 115.5 0.0 3.8e-33 115.2 0.0 1.0 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF109133 - 0.0048 16.4 0.0 0.0063 16.0 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Chlorophyllase2 PF12740.7 ORF109133 - 0.0053 15.7 0.0 0.0074 15.2 0.0 1.1 1 0 0 1 1 1 1 Chlorophyllase enzyme Abhydrolase_3 PF07859.13 ORF109133 - 0.0096 15.8 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Lipase_3 PF01764.25 ORF109133 - 0.097 12.5 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Lipase (class 3) SURF2 PF05477.11 ORF106656 - 0.24 11.1 0.0 0.33 10.6 0.0 1.1 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) GST_N PF02798.20 ORF106197 - 2e-15 56.9 0.0 3.1e-15 56.3 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF106197 - 4.1e-11 43.1 0.0 7.4e-11 42.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF106197 - 7.1e-07 29.4 0.0 1.3e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF106197 - 0.00027 21.1 0.0 0.00069 19.8 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF106197 - 0.039 14.0 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 ORF106197 - 0.11 12.7 0.0 0.33 11.2 0.0 1.9 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain DUF5134 PF17197.4 ORF105653 - 0.08 12.8 0.7 5.8 6.8 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5134) CbiN PF02553.15 ORF105294 - 0.18 11.8 0.5 0.45 10.5 0.5 1.6 1 0 0 1 1 1 0 Cobalt transport protein component CbiN Zip PF02535.22 ORF105294 - 0.24 10.6 1.5 0.31 10.2 1.5 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter Ninjurin PF04923.12 ORF105294 - 0.5 10.3 3.5 0.45 10.5 0.9 2.2 2 0 0 2 2 2 0 Ninjurin Presenilin PF01080.17 ORF105294 - 2.5 6.8 11.0 3.3 6.4 10.8 1.3 1 1 0 1 1 1 0 Presenilin MMU163 PF17119.5 ORF105294 - 3.1 6.9 6.2 4 6.5 6.2 1.1 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis TOH_N PF12549.8 ORF100844 - 0.13 12.1 2.2 0.41 10.5 2.2 1.8 1 0 0 1 1 1 0 Tyrosine hydroxylase N terminal zf-nanos PF05741.13 NODE_31190_length_698_cov_3.656109_g24700_i0reverse_frame_1 - 0.22 11.8 0.2 0.22 11.8 0.2 3.1 3 0 0 3 3 3 0 Nanos RNA binding domain TPR_2 PF07719.17 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 2.7e-13 48.9 0.9 1e-05 25.3 0.1 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 1.9e-12 47.3 3.0 1.4e-08 34.9 0.1 3.6 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 4.6e-10 38.9 0.7 0.00011 21.9 0.1 4.4 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 1.2e-09 37.6 2.7 0.00063 19.8 0.0 4.4 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 1.2e-08 35.3 3.2 3.4e-06 27.5 0.7 2.8 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 6.5e-08 32.2 0.3 0.06 13.2 0.0 5.0 5 1 0 5 5 5 1 Tetratricopeptide repeat TPR_14 PF13428.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 1.6e-06 28.4 8.0 0.28 12.1 0.1 4.2 2 2 2 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 2.3e-06 27.2 1.3 0.0025 17.5 0.2 4.2 2 1 2 4 4 4 2 TPR repeat TPR_9 PF13371.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 5.9e-06 26.3 1.1 1.1 9.4 0.0 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_4 PF07721.14 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 0.00015 22.0 1.9 0.95 10.3 0.2 4.3 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 0.00038 20.3 1.1 0.17 12.0 0.0 4.0 3 2 2 5 5 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 0.00043 20.5 0.1 6.4 7.4 0.0 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 0.00056 20.5 0.7 0.00056 20.5 0.7 3.4 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 0.003 18.1 6.9 1.3 9.8 0.1 4.0 5 0 0 5 5 3 2 Tetratricopeptide repeat TPR_MalT PF17874.1 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 0.012 15.0 1.1 0.037 13.4 0.1 2.0 1 1 0 2 2 2 0 MalT-like TPR region TPR_21 PF09976.9 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 0.15 11.8 4.2 0.1 12.3 0.8 2.3 3 0 0 3 3 3 0 Tetratricopeptide repeat-like domain TPR_3 PF07720.12 NODE_31177_length_698_cov_100.953243_g24687_i0reverse_frame_1 - 0.2 11.7 2.1 1.7 8.7 0.1 2.9 3 0 0 3 3 2 0 Tetratricopeptide repeat # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks93.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks93.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks93.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks93.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:34 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF1681 PF07933.14 NODE_31163_length_698_cov_287.736048_g24674_i0forward_frame_1 - 2e-31 108.7 0.0 2.7e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1681) Nramp PF01566.18 NODE_31146_length_699_cov_3.373494_g24663_i0forward_frame_1 - 1.5e-48 165.6 7.7 1.5e-48 165.6 7.7 1.6 2 0 0 2 2 2 1 Natural resistance-associated macrophage protein OAR PF03826.17 NODE_31106_length_700_cov_1.968421_g24630_i0forward_frame_2 - 0.089 12.6 0.0 0.22 11.4 0.0 1.7 1 0 0 1 1 1 0 OAR domain FKBP_C PF00254.28 NODE_31064_length_700_cov_2189.455639_g24591_i0reverse_frame_3 - 1.8e-07 31.4 0.1 6.1e-07 29.7 0.0 1.9 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase SKA2 PF16740.5 NODE_31042_length_701_cov_143.001502_g24572_i0reverse_frame_3 - 0.22 11.3 4.6 0.48 10.2 4.6 1.6 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 PH_TFIIH PF08567.11 NODE_31042_length_701_cov_143.001502_g24572_i0reverse_frame_2 - 0.018 15.3 0.3 0.018 15.3 0.3 1.9 2 0 0 2 2 2 0 TFIIH p62 subunit, N-terminal domain FAM194 PF14977.6 NODE_31038_length_701_cov_176.460961_g24568_i0reverse_frame_3 - 0.29 10.4 2.8 0.44 9.8 2.8 1.3 1 0 0 1 1 1 0 FAM194 protein Hpre_diP_synt_I PF07456.11 NODE_31011_length_702_cov_51.242879_g24545_i0reverse_frame_3 - 0.023 14.7 0.8 0.047 13.7 0.8 1.4 1 0 0 1 1 1 0 Heptaprenyl diphosphate synthase component I Sensor PF13796.6 NODE_31007_length_702_cov_90.685157_g24541_i0reverse_frame_3 - 7.5 6.6 5.3 3.9 7.5 3.1 1.6 2 0 0 2 2 2 0 Putative sensor Got1 PF04178.12 NODE_31007_length_702_cov_90.685157_g24541_i0reverse_frame_2 - 7.5e-25 87.6 14.5 1.2e-24 86.9 14.5 1.4 1 0 0 1 1 1 1 Got1/Sft2-like family Het-C PF07217.11 NODE_31007_length_702_cov_90.685157_g24541_i0forward_frame_3 - 0.19 10.3 0.2 0.31 9.5 0.2 1.3 1 0 0 1 1 1 0 Heterokaryon incompatibility protein Het-C FOXP-CC PF16159.5 NODE_31007_length_702_cov_90.685157_g24541_i0forward_frame_3 - 6.1 7.6 10.6 17 6.1 1.8 2.9 2 1 1 3 3 3 0 FOXP coiled-coil domain Ribosomal_S3_C PF00189.20 NODE_31006_length_702_cov_94.580210_g24540_i0reverse_frame_2 - 1.6e-22 79.8 2.9 2.5e-22 79.2 2.9 1.3 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 NODE_31006_length_702_cov_94.580210_g24540_i0reverse_frame_2 - 2.1e-07 30.6 0.2 4.2e-07 29.7 0.2 1.5 1 0 0 1 1 1 1 KH domain UN_NPL4 PF11543.8 NODE_31006_length_702_cov_94.580210_g24540_i0reverse_frame_2 - 0.041 14.4 0.0 0.23 12.0 0.0 2.0 2 0 0 2 2 2 0 Nuclear pore localisation protein NPL4 Coilin_N PF15862.5 NODE_31006_length_702_cov_94.580210_g24540_i0reverse_frame_2 - 0.13 12.0 0.3 1.9 8.3 0.0 2.1 2 0 0 2 2 2 0 Coilin N-terminus INTS2 PF14750.6 NODE_31000_length_702_cov_171.283358_g24534_i0reverse_frame_3 - 0.11 10.1 0.5 4.6 4.7 0.0 2.0 2 0 0 2 2 2 0 Integrator complex subunit 2 HCV_core PF01542.18 NODE_31000_length_702_cov_171.283358_g24534_i0reverse_frame_2 - 0.15 12.4 0.3 0.41 11.1 0.0 1.8 2 0 0 2 2 2 0 Hepatitis C virus core protein Ank_2 PF12796.7 NODE_31000_length_702_cov_171.283358_g24534_i0forward_frame_3 - 1.2e-26 93.1 0.1 1.1e-10 41.9 0.1 3.2 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_31000_length_702_cov_171.283358_g24534_i0forward_frame_3 - 5.8e-19 67.9 3.4 7.1e-05 23.0 0.2 5.1 1 1 4 5 5 5 5 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_31000_length_702_cov_171.283358_g24534_i0forward_frame_3 - 2.6e-18 66.1 0.3 2.8e-07 31.0 0.1 3.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 NODE_31000_length_702_cov_171.283358_g24534_i0forward_frame_3 - 3.2e-17 62.1 2.2 0.0014 19.0 0.0 5.1 5 1 0 5 5 5 4 Ankyrin repeat Ank_3 PF13606.6 NODE_31000_length_702_cov_171.283358_g24534_i0forward_frame_3 - 2.3e-16 58.2 0.1 0.031 14.8 0.0 5.3 5 0 0 5 5 5 5 Ankyrin repeat ubiquitin PF00240.23 NODE_31000_length_702_cov_171.283358_g24534_i0forward_frame_3 - 0.00021 21.0 0.0 0.00044 19.9 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin family DUF2407 PF10302.9 NODE_31000_length_702_cov_171.283358_g24534_i0forward_frame_3 - 0.044 14.4 0.0 0.073 13.6 0.0 1.3 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Ribosomal_L36 PF00444.18 NODE_30990_length_702_cov_386.169415_g24527_i0forward_frame_2 - 5.8e-05 23.2 6.0 0.00013 22.0 6.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L36 PAN_1 PF00024.26 ORF94890 - 0.00013 21.9 15.6 0.0019 18.1 1.0 3.1 2 1 1 3 3 3 2 PAN domain PAN_4 PF14295.6 ORF94890 - 0.00047 20.0 15.4 0.0065 16.3 2.0 3.6 2 1 1 3 3 3 2 PAN domain PAN_3 PF08277.12 ORF94890 - 1.4 8.8 11.1 3.6 7.5 0.1 3.1 3 0 0 3 3 3 0 PAN-like domain PAN_2 PF08276.11 ORF94890 - 3.7 7.7 16.5 2.8 8.1 0.6 3.6 4 0 0 4 4 4 0 PAN-like domain MORN PF02493.20 ORF94331 - 1.3e-15 56.3 15.2 1.3e-06 27.9 0.4 4.8 4 0 0 4 4 4 3 MORN repeat IFT20 PF14931.6 ORF94331 - 0.0045 17.1 3.6 0.75 10.0 2.0 2.3 2 0 0 2 2 2 2 Intraflagellar transport complex B, subunit 20 HTH_Tnp_Mu_1 PF02316.16 ORF94331 - 0.035 14.3 0.6 0.057 13.6 0.6 1.4 1 0 0 1 1 1 0 Mu DNA-binding domain FSH1 PF03959.13 ORF90437 - 5.7e-29 101.3 0.0 7.2e-29 101.0 0.0 1.1 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Fez1 PF06818.15 ORF86881 - 0.0029 18.1 26.7 0.0052 17.3 26.7 1.4 1 0 0 1 1 1 1 Fez1 EzrA PF06160.12 ORF86881 - 0.012 13.9 16.4 0.016 13.4 16.4 1.1 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA ALMT PF11744.8 ORF86881 - 0.11 11.3 15.9 0.16 10.8 15.9 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter Tmemb_cc2 PF10267.9 ORF86881 - 0.23 10.5 22.7 0.025 13.8 8.7 2.1 1 1 1 2 2 2 0 Predicted transmembrane and coiled-coil 2 protein Baculo_F PF12259.8 ORF86881 - 0.57 8.6 10.8 1.1 7.6 1.0 1.9 1 1 1 2 2 2 0 Baculovirus F protein NPV_P10 PF05531.12 ORF86881 - 0.66 10.5 7.8 0.79 10.2 0.7 2.6 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF3584 PF12128.8 ORF86881 - 4.3 4.7 29.1 5.6 4.4 29.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) HrpB7 PF09486.10 ORF86881 - 4.8 7.6 37.8 6 7.2 7.9 2.3 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) V_ATPase_I PF01496.19 ORF86881 - 4.8 5.0 12.7 5.7 4.7 12.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF948 PF06103.11 ORF86881 - 4.8 7.5 7.1 32 4.9 5.7 2.5 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) FAM184 PF15665.5 ORF86881 - 7.3 6.3 32.3 3.9 7.2 1.9 3.1 1 1 2 3 3 3 0 Family with sequence similarity 184, A and B Tup_N PF08581.10 ORF86881 - 9.3 6.6 14.9 1.4 9.3 5.2 3.0 1 1 1 2 2 2 0 Tup N-terminal DUF1664 PF07889.12 ORF86881 - 9.5 6.3 14.5 3.2 7.8 7.8 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Peptidase_M35 PF02102.15 ORF84274 - 0.09 11.6 0.5 0.14 11.0 0.5 1.2 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family DUF5447 PF17525.2 ORF8427 - 0.047 14.2 0.3 0.13 12.7 0.4 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5447) Ribosom_S30AE_C PF16321.5 ORF8427 - 0.055 13.2 0.1 0.13 12.0 0.1 1.6 1 0 0 1 1 1 0 Sigma 54 modulation/S30EA ribosomal protein C terminus CDC24_OB1 PF17246.2 ORF8427 - 0.73 10.0 4.5 6.2 7.0 0.3 2.8 2 1 0 2 2 2 0 Cell division control protein 24, OB domain 1 zf-RING_5 PF14634.6 ORF83021 - 0.0032 17.4 4.0 0.0057 16.6 0.2 2.5 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_2 PF13639.6 ORF83021 - 0.052 13.9 9.5 0.086 13.2 1.1 3.5 3 1 0 3 3 3 0 Ring finger domain Prok-RING_4 PF14447.6 ORF83021 - 0.068 13.0 0.1 0.068 13.0 0.1 2.8 3 0 0 3 3 3 0 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF83021 - 0.28 11.3 0.0 0.28 11.3 0.0 2.6 3 0 0 3 3 3 0 RING-type zinc-finger zf-RING_11 PF17123.5 ORF83021 - 0.58 10.0 9.9 11 5.9 1.3 3.7 3 0 0 3 3 3 0 RING-like zinc finger Use1 PF09753.9 ORF82435 - 9.7e-07 28.8 8.2 1.4e-06 28.3 8.2 1.2 1 0 0 1 1 1 1 Membrane fusion protein Use1 SNARE PF05739.19 ORF82435 - 0.00011 22.1 7.1 0.00013 21.8 4.5 2.4 2 0 0 2 2 2 1 SNARE domain Syntaxin-6_N PF09177.11 ORF82435 - 0.0012 19.4 0.9 0.0012 19.4 0.9 2.0 2 0 0 2 2 2 1 Syntaxin 6, N-terminal Mce4_CUP1 PF11887.8 ORF82435 - 0.094 12.2 0.2 0.17 11.3 0.2 1.3 1 0 0 1 1 1 0 Cholesterol uptake porter CUP1 of Mce4, putative DUF5320 PF17253.2 ORF82435 - 0.37 11.9 2.5 8.6 7.5 0.1 2.9 2 1 1 3 3 3 0 Family of unknown function (DUF5320) DUF2616 PF11077.8 ORF81033 - 0.063 13.0 0.2 0.063 13.0 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2616) XhlA PF10779.9 ORF81033 - 0.077 13.2 1.8 0.3 11.3 1.9 1.9 2 0 0 2 2 2 0 Haemolysin XhlA AAA PF00004.29 ORF80321 - 2.7e-28 99.0 0.0 4.3e-28 98.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF80321 - 6.7e-09 35.4 0.1 1.4e-08 34.3 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain TSP_1 PF00090.19 ORF80087 - 5.5 7.3 6.6 29 5.0 0.3 2.6 2 0 0 2 2 2 0 Thrombospondin type 1 domain ubiquitin PF00240.23 ORF72843 - 2.8e-22 78.2 1.1 1.2e-15 57.0 0.1 2.7 3 0 0 3 3 3 2 Ubiquitin family Rad60-SLD PF11976.8 ORF72843 - 4.3e-09 36.1 0.2 1.1e-06 28.4 0.1 2.4 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF72843 - 0.002 18.4 0.0 2 8.9 0.0 3.3 3 1 0 3 3 3 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF72843 - 0.0072 16.3 0.1 7.3 6.7 0.0 2.7 3 0 0 3 3 3 2 Ubiquitin-like domain MAT1 PF06391.13 ORF72339 - 9.7e-15 54.9 0.4 1.2e-14 54.6 0.4 1.1 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 Vir_act_alpha_C PF10400.9 ORF72339 - 0.018 15.7 0.6 0.018 15.7 0.6 1.6 2 0 0 2 2 2 0 Virulence activator alpha C-term Ank_2 PF12796.7 ORF69620 - 0.024 15.2 0.0 0.076 13.6 0.0 1.8 2 1 0 2 2 2 0 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF69620 - 0.056 13.8 0.4 0.2 12.0 0.1 2.1 3 0 0 3 3 3 0 Ankyrin repeats (many copies) Ras PF00071.22 ORF67814 - 7.7e-31 106.9 0.3 9.6e-31 106.6 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF67814 - 2.2e-21 76.3 0.1 3.5e-21 75.7 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF67814 - 1.3e-09 37.7 0.2 1.6e-09 37.4 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF67814 - 4.2e-06 26.3 0.2 6.5e-06 25.7 0.2 1.3 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF67814 - 0.00016 21.8 0.0 0.00033 20.7 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF67814 - 0.0015 18.0 0.1 0.0022 17.5 0.1 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 ORF67814 - 0.0057 16.2 0.1 0.33 10.4 0.1 2.2 1 1 0 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF67814 - 0.015 14.9 0.3 0.044 13.3 0.2 2.1 1 1 0 1 1 1 0 Ferrous iron transport protein B TniB PF05621.11 ORF67814 - 0.019 14.4 0.0 0.03 13.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein PduV-EutP PF10662.9 ORF67814 - 0.033 13.9 0.1 1 9.1 0.0 2.8 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation ATPase PF06745.13 ORF67814 - 0.069 12.5 0.1 0.5 9.7 0.0 2.0 2 0 0 2 2 2 0 KaiC FGFR3_TM PF18123.1 ORF67573 - 0.58 9.7 11.0 1.9 8.1 1.3 2.7 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain GCP_C_terminal PF04130.13 ORF66157 - 1.6e-21 77.1 15.0 1.8e-21 76.9 15.0 1.0 1 0 0 1 1 1 1 Gamma tubulin complex component C-terminal INSC_LBD PF16748.5 ORF65356 - 0.13 11.7 2.0 7.9 6.0 0.1 2.5 2 0 0 2 2 2 0 Inscuteable LGN-binding domain Rhomboid PF01694.22 ORF63901 - 1.6e-19 70.4 6.1 1.6e-19 70.4 6.1 1.7 1 1 1 2 2 2 1 Rhomboid family DUF5516 PF17637.2 ORF63901 - 0.1 12.3 0.1 0.1 12.3 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5516) Trans_reg_C PF00486.28 ORF62300 - 5.1e-23 81.0 0.1 1.2e-22 79.7 0.1 1.7 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal Response_reg PF00072.24 ORF62300 - 7.1e-22 77.7 0.0 9.7e-22 77.3 0.0 1.2 1 0 0 1 1 1 1 Response regulator receiver domain Adeno_E3_CR2 PF02439.15 ORF61635 - 0.018 14.8 0.4 0.018 14.8 0.4 2.1 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 TRIQK PF15168.6 ORF61635 - 2 8.4 7.4 0.89 9.5 2.3 2.7 2 1 0 2 2 2 0 Triple QxxK/R motif-containing protein family InvH PF04741.12 ORF61495 - 0.19 11.7 0.2 0.32 10.9 0.2 1.3 1 0 0 1 1 1 0 InvH outer membrane lipoprotein MORN PF02493.20 ORF6018 - 9.3e-15 53.6 17.9 1.9e-05 24.2 1.8 4.4 4 0 0 4 4 4 4 MORN repeat DNA_photolyase PF00875.18 ORF56352 - 0.028 14.4 0.0 0.048 13.7 0.0 1.3 1 0 0 1 1 1 0 DNA photolyase Syntaxin-6_N PF09177.11 ORF54305 - 5.2e-05 23.7 2.6 6.5e-05 23.4 0.6 2.0 2 0 0 2 2 2 1 Syntaxin 6, N-terminal Use1 PF09753.9 ORF54305 - 0.00089 19.1 6.5 0.0014 18.4 6.5 1.4 1 1 0 1 1 1 1 Membrane fusion protein Use1 SNARE PF05739.19 ORF54305 - 0.00094 19.1 2.3 0.0026 17.7 2.3 1.8 1 0 0 1 1 1 1 SNARE domain PspA_IM30 PF04012.12 ORF54305 - 0.42 10.1 6.7 0.54 9.8 0.6 2.5 2 1 0 2 2 2 0 PspA/IM30 family UIM PF02809.20 ORF4964 - 2.3e-07 30.3 11.5 0.0028 17.5 1.0 3.0 2 0 0 2 2 2 2 Ubiquitin interaction motif DUF2793 PF10983.8 ORF4964 - 0.016 15.1 1.4 2 8.3 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2793) EF-hand_6 PF13405.6 ORF47859 - 5.3e-05 22.8 0.4 0.033 14.1 0.0 2.9 2 1 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 ORF47859 - 0.00088 18.7 2.2 0.029 13.9 0.1 2.8 3 0 0 3 3 3 1 EF hand EF-hand_5 PF13202.6 ORF47859 - 0.0068 15.9 1.7 0.15 11.6 0.2 3.2 3 0 0 3 3 3 1 EF hand EF-hand_7 PF13499.6 ORF47859 - 0.021 15.3 0.3 0.062 13.7 0.3 1.8 1 1 0 1 1 1 0 EF-hand domain pair EF-hand_8 PF13833.6 ORF47859 - 0.09 12.6 0.7 0.75 9.7 0.1 2.3 1 1 1 2 2 2 0 EF-hand domain pair Ank_2 PF12796.7 ORF47173 - 1.1e-14 54.7 0.0 2.4e-07 31.2 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 ORF47173 - 2e-12 47.0 0.0 2.9e-05 24.3 0.0 4.2 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 ORF47173 - 3.1e-10 39.4 0.0 0.0023 18.2 0.0 4.6 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 ORF47173 - 3.2e-09 37.2 0.0 0.00036 21.0 0.0 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 ORF47173 - 4.2e-09 36.5 0.1 3.8e-06 27.1 0.0 2.6 2 1 0 2 2 2 2 Ankyrin repeats (many copies) Patched PF02460.18 ORF45695 - 4.5e-09 35.0 25.3 5.4e-09 34.7 25.3 1.0 1 0 0 1 1 1 1 Patched family MMPL PF03176.15 ORF45695 - 0.0095 14.9 18.0 0.012 14.5 18.0 1.1 1 0 0 1 1 1 1 MMPL family SecD_SecF PF02355.16 ORF45695 - 0.097 12.0 22.9 0.15 11.4 22.9 1.2 1 0 0 1 1 1 0 Protein export membrane protein DUF3021 PF11457.8 ORF45695 - 2 8.8 24.5 3.2 8.1 10.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3021) Cyd_oper_YbgE PF09600.10 ORF42969 - 1.1 9.6 6.4 0.15 12.4 1.3 2.1 2 0 0 2 2 2 0 Cyd operon protein YbgE (Cyd_oper_YbgE) Ion_trans PF00520.31 ORF41035 - 1.3e-06 27.9 4.1 2.7e-06 26.8 3.5 1.7 2 0 0 2 2 2 1 Ion transport protein Fer4_11 PF13247.6 ORF40203 - 2.1e-12 47.0 11.3 2.1e-12 47.0 11.3 2.5 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF40203 - 2.3e-12 46.9 31.5 2.8e-08 33.8 9.8 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 ORF40203 - 7.9e-12 44.5 38.7 9.8e-07 28.3 1.7 5.9 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_7 PF12838.7 ORF40203 - 3.1e-11 43.7 51.9 5.7e-06 26.8 10.5 3.5 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF40203 - 1.7e-10 40.8 28.4 6.9e-07 29.3 11.0 3.6 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 ORF40203 - 2.3e-09 36.9 38.5 6.8e-05 22.8 2.6 4.8 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_2 PF12797.7 ORF40203 - 3.9e-08 32.9 36.9 1.2e-05 25.1 2.7 4.6 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.6 ORF40203 - 1.2e-07 32.6 29.6 0.061 14.3 1.7 4.8 3 1 1 4 4 4 4 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 ORF40203 - 0.00025 21.3 4.3 0.00025 21.3 4.3 5.5 5 2 0 5 5 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 ORF40203 - 0.00032 20.8 32.1 0.0068 16.5 12.3 4.2 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 ORF40203 - 0.0034 17.8 6.3 0.0034 17.8 6.3 3.7 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF40203 - 0.0085 17.0 56.5 0.041 14.8 4.9 5.3 5 1 0 5 5 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 ORF40203 - 0.023 15.2 1.5 0.023 15.2 1.5 4.5 2 1 3 5 5 5 0 4Fe-4S dicluster domain ETF_QO PF05187.13 ORF40203 - 0.6 10.3 11.0 0.79 9.9 0.4 2.6 2 1 0 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S TPR_2 PF07719.17 ORF38888 - 7.6e-08 31.9 1.5 0.00096 19.1 0.2 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 ORF38888 - 2.8e-07 30.1 9.0 4.4e-05 23.1 0.3 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 ORF38888 - 7.2e-07 29.3 0.0 1e-06 28.7 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF38888 - 2.7e-06 27.2 1.3 0.0012 18.9 0.1 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 ORF38888 - 0.0022 18.2 0.1 0.0081 16.5 0.1 1.9 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 ORF38888 - 0.03 14.4 0.5 0.51 10.5 0.1 2.4 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_19 PF14559.6 ORF38888 - 0.033 14.7 0.1 0.056 14.0 0.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF2951 PF11166.8 ORF38888 - 0.036 14.3 1.6 0.036 14.3 1.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) TPR_6 PF13174.6 ORF38888 - 0.041 14.5 0.2 2.1 9.2 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Y1_Tnp PF01797.16 ORF38216 - 8e-40 135.7 0.0 1.1e-39 135.2 0.0 1.2 1 0 0 1 1 1 1 Transposase IS200 like T7SS_ESX1_EccB PF05108.13 ORF38216 - 0.12 11.0 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 Type VII secretion system ESX-1, transport TM domain B IF4E PF01652.18 ORF36868 - 7.9e-42 142.7 0.3 1.1e-41 142.3 0.3 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E DUF4734 PF15881.5 ORF36868 - 0.079 13.1 0.7 0.71 10.1 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4734) Adeno_E3_15_3 PF03307.14 ORF35906 - 0.015 15.2 1.0 3.7 7.5 0.2 2.3 2 0 0 2 2 2 0 Adenovirus 15.3kD protein in E3 region PRK PF00485.18 ORF30528 - 3.3e-10 40.0 0.1 7.4e-10 38.9 0.1 1.5 1 1 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 ORF30528 - 3.9e-07 30.7 0.1 0.00011 22.8 0.1 2.4 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 ORF30528 - 0.00026 20.9 0.1 0.1 12.4 0.0 2.3 2 0 0 2 2 2 2 Deoxynucleoside kinase AAA_22 PF13401.6 ORF30528 - 0.00026 21.3 0.0 0.00038 20.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain KTI12 PF08433.10 ORF30528 - 0.00091 18.8 0.0 0.0013 18.2 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Thymidylate_kin PF02223.17 ORF30528 - 0.0024 17.6 0.1 0.28 10.8 0.0 2.3 2 0 0 2 2 2 1 Thymidylate kinase NB-ARC PF00931.22 ORF30528 - 0.0028 16.9 0.0 0.0041 16.4 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain AAA_17 PF13207.6 ORF30528 - 0.0038 17.6 0.0 0.22 11.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 ORF30528 - 0.0049 17.0 0.0 0.029 14.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 ORF30528 - 0.011 16.2 0.0 0.016 15.6 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 ORF30528 - 0.024 13.9 0.0 0.035 13.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin RNA_helicase PF00910.22 ORF30528 - 0.031 14.7 0.0 0.064 13.6 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_28 PF13521.6 ORF30528 - 0.065 13.5 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain SKI PF01202.22 ORF30528 - 0.096 12.8 0.0 1.3 9.1 0.0 2.1 2 0 0 2 2 2 0 Shikimate kinase CoaE PF01121.20 ORF30528 - 0.099 12.3 0.0 3.8 7.1 0.0 2.2 2 0 0 2 2 2 0 Dephospho-CoA kinase SRP54 PF00448.22 ORF30528 - 0.1 12.2 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_24 PF13479.6 ORF30528 - 0.11 12.2 0.5 0.23 11.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain RuvB_N PF05496.12 ORF30528 - 0.12 12.1 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 ORF30528 - 0.12 12.3 0.0 0.27 11.2 0.0 1.6 2 0 0 2 2 1 0 NACHT domain APS_kinase PF01583.20 ORF30528 - 0.14 12.0 0.0 0.37 10.7 0.0 1.7 2 0 0 2 2 2 0 Adenylylsulphate kinase ABC_tran PF00005.27 ORF30528 - 0.16 12.5 0.1 0.2 12.1 0.1 1.6 1 1 0 1 1 1 0 ABC transporter T2SSE PF00437.20 ORF30528 - 0.22 10.5 0.0 0.31 10.1 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein Glyco_hydro_31 PF01055.26 ORF30229 - 9.7e-28 97.5 0.1 2.3e-27 96.3 0.1 1.5 2 0 0 2 2 2 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF30229 - 2.3e-18 66.2 0.0 5.8e-18 64.9 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5110) DOMON PF03351.17 ORF28258 - 7e-08 32.7 0.2 7.4e-06 26.2 0.1 2.3 2 0 0 2 2 2 2 DOMON domain Strabismus PF06638.11 ORF2702 - 0.14 10.8 6.2 0.16 10.6 6.2 1.1 1 0 0 1 1 1 0 Strabismus protein DUF2070 PF09843.9 ORF26908 - 6.3 5.0 14.4 8 4.6 14.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ABC_tran PF00005.27 ORF21509 - 5.5e-14 52.9 1.1 1.7e-13 51.3 0.0 2.0 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF21509 - 1.9e-08 34.0 1.1 2.2e-08 33.8 0.3 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF21509 - 0.093 13.0 0.6 2 8.7 0.6 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Pribosyltran PF00156.27 ORF21084 - 3.6e-12 46.1 0.0 4.9e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain LGT PF01790.18 ORF21084 - 0.17 11.1 0.0 0.23 10.7 0.0 1.1 1 0 0 1 1 1 0 Prolipoprotein diacylglyceryl transferase CID_GANP PF16766.5 ORF20898 - 0.061 13.5 0.6 0.097 12.9 0.1 1.6 2 0 0 2 2 2 0 Binding region of GANP to ENY2 DOMON PF03351.17 ORF20788 - 1.4e-07 31.8 2.6 4.3e-06 27.0 0.4 2.5 2 1 1 3 3 3 2 DOMON domain Fer4_4 PF12800.7 ORF19774 - 0.25 12.0 2.5 1 10.0 2.5 2.0 1 0 0 1 1 1 0 4Fe-4S binding domain NIR_SIR PF01077.22 ORF19654 - 2.7e-15 56.3 0.1 5.3e-15 55.3 0.0 1.5 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain Spermine_synth PF01564.17 ORF15674 - 2.6e-11 43.3 0.0 3.3e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Spermine/spermidine synthase domain AfaD PF05775.12 ORF15674 - 0.0029 18.0 0.0 0.21 12.0 0.0 2.3 2 0 0 2 2 2 2 Enterobacteria AfaD invasin protein MORN PF02493.20 ORF15285 - 2.3e-15 55.5 14.8 1.3e-06 27.9 0.4 4.6 4 0 0 4 4 4 3 MORN repeat IFT20 PF14931.6 ORF15285 - 0.0046 17.1 3.6 0.75 10.0 2.0 2.3 2 0 0 2 2 2 2 Intraflagellar transport complex B, subunit 20 HTH_Tnp_Mu_1 PF02316.16 ORF15285 - 0.036 14.3 0.6 0.057 13.6 0.6 1.4 1 0 0 1 1 1 0 Mu DNA-binding domain dsrm PF00035.26 ORF152802 - 2.2e-16 60.3 0.0 3.8e-08 33.9 0.0 2.2 2 0 0 2 2 2 2 Double-stranded RNA binding motif DND1_DSRM PF14709.7 ORF152802 - 0.00032 20.9 4.0 0.57 10.5 0.2 3.5 2 2 0 2 2 2 2 double strand RNA binding domain from DEAD END PROTEIN 1 DUF3110 PF11360.8 ORF152802 - 0.038 14.2 0.0 1.7 8.9 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3110) P3A PF08727.11 ORF152802 - 0.079 12.4 0.0 9.3 5.7 0.0 2.5 2 0 0 2 2 2 0 Poliovirus 3A protein like ABC_tran PF00005.27 ORF150658 - 5.4e-14 52.9 1.0 1.7e-13 51.3 0.0 2.0 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 ORF150658 - 1.5e-08 34.3 0.6 1.8e-08 34.1 0.1 1.4 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 ORF150658 - 0.096 12.9 0.6 2 8.7 0.6 2.5 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF4611 PF15387.6 ORF150584 - 0.1 12.8 0.1 0.19 12.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) Receptor_2B4 PF11465.8 ORF143487 - 0.31 11.3 3.8 0.18 12.0 1.3 2.0 2 1 1 3 3 3 0 Natural killer cell receptor 2B4 DUF4834 PF16118.5 ORF143274 - 0.65 11.0 0.0 0.65 11.0 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) RRM_1 PF00076.22 ORF141664 - 1.4e-16 60.0 0.0 2.1e-16 59.5 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) YecM PF06185.12 ORF141664 - 0.036 13.7 0.0 0.052 13.2 0.0 1.2 1 0 0 1 1 1 0 YecM protein Proton_antipo_M PF00361.20 ORF138838 - 2.1e-27 96.1 7.0 2.1e-27 96.1 7.0 1.6 1 1 0 1 1 1 1 Proton-conducting membrane transporter MJ1316 PF04457.12 ORF137357 - 1.5e-11 44.8 1.0 8.1e-11 42.5 0.1 2.5 3 0 0 3 3 3 1 MJ1316 RNA cyclic group end recognition domain Hamartin PF04388.12 ORF137357 - 0.093 11.4 6.6 0.11 11.2 6.6 1.1 1 0 0 1 1 1 0 Hamartin protein Smg4_UPF3 PF03467.15 ORF137357 - 0.42 10.6 11.4 0.79 9.7 11.4 1.4 1 0 0 1 1 1 0 Smg-4/UPF3 family Presenilin PF01080.17 ORF137357 - 1.9 7.1 6.4 2.1 7.0 6.4 1.1 1 0 0 1 1 1 0 Presenilin FKBP_C PF00254.28 ORF134618 - 1.5e-23 82.9 0.0 3.1e-23 81.9 0.0 1.5 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Chon_Sulph_att PF06566.11 ORF134618 - 0.019 14.9 0.1 0.024 14.5 0.1 1.2 1 0 0 1 1 1 0 Chondroitin sulphate attachment domain XPC-binding PF09280.11 ORF134618 - 0.099 12.4 0.2 0.23 11.2 0.2 1.6 1 0 0 1 1 1 0 XPC-binding domain MORN PF02493.20 ORF127453 - 9.3e-15 53.6 17.9 1.9e-05 24.2 1.8 4.4 4 0 0 4 4 4 4 MORN repeat DUF1198 PF06711.11 ORF127016 - 4.4e-67 224.6 0.4 5.3e-67 224.3 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1198) FxsA PF04186.13 ORF127016 - 0.0069 16.5 0.1 0.012 15.8 0.1 1.3 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein TPP_enzyme_M PF00205.22 ORF127016 - 0.014 15.1 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain DUF5408 PF17402.2 ORF126381 - 0.033 14.1 0.0 0.064 13.1 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5408) SHIPPO-rpt PF07004.12 ORF125313 - 3.1e-05 24.7 38.6 0.011 16.7 0.6 6.4 6 1 0 6 6 6 3 Sperm-tail PG-rich repeat HMMR_N PF15905.5 ORF125313 - 2.8 7.3 5.4 1.8 7.9 0.4 2.5 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal M20_dimer PF07687.14 ORF124763 - 8.9e-11 41.7 0.0 1.3e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 ORF124763 - 0.00025 20.8 0.0 0.00028 20.6 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Chromo_shadow PF01393.19 ORF124022 - 0.12 12.4 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Chromo shadow domain Patched PF02460.18 ORF120282 - 4.5e-09 35.0 25.3 5.4e-09 34.7 25.3 1.0 1 0 0 1 1 1 1 Patched family MMPL PF03176.15 ORF120282 - 0.0095 14.9 18.0 0.012 14.5 18.0 1.1 1 0 0 1 1 1 1 MMPL family SecD_SecF PF02355.16 ORF120282 - 0.097 12.0 22.9 0.15 11.4 22.9 1.2 1 0 0 1 1 1 0 Protein export membrane protein DUF3021 PF11457.8 ORF120282 - 2 8.8 24.5 3.2 8.1 10.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3021) FTO_CTD PF12934.7 ORF116924 - 0.002 17.9 0.1 0.0031 17.3 0.1 1.3 1 0 0 1 1 1 1 FTO C-terminal domain MCM3AP_GANP PF16769.5 ORF116924 - 0.022 13.0 0.4 0.03 12.6 0.4 1.1 1 0 0 1 1 1 0 MCM3AP domain of GANP Ion_trans_2 PF07885.16 ORF116255 - 0.013 15.4 7.1 0.013 15.4 7.1 2.3 2 1 1 3 3 3 0 Ion channel TMEM43 PF07787.12 ORF116255 - 6.8 6.0 9.4 16 4.8 9.4 1.6 1 0 0 1 1 1 0 Transmembrane protein 43 TSP_1 PF00090.19 ORF115736 - 5.5 7.3 6.6 29 5.0 0.3 2.6 2 0 0 2 2 2 0 Thrombospondin type 1 domain DUF2399 PF09664.10 ORF114461 - 7.1e-07 29.3 0.0 1.1e-06 28.6 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function C-terminus (DUF2399) DUF2220 PF09983.9 ORF114461 - 4.1e-05 23.0 0.0 5.5e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria C-term(DUF2220) CRAL_TRIO PF00650.20 ORF113581 - 3.5e-11 43.1 0.0 4.9e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain FtsX PF02687.21 ORF108866 - 0.00055 20.4 0.4 0.00055 20.4 0.4 2.0 2 1 0 2 2 2 1 FtsX-like permease family UPF0242 PF06785.11 ORF107661 - 0.0041 17.2 1.1 0.0056 16.8 1.1 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF3450 PF11932.8 ORF107661 - 0.0097 15.2 0.2 0.013 14.8 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) DUF1664 PF07889.12 ORF107661 - 0.067 13.2 0.3 0.13 12.3 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) TMPIT PF07851.13 ORF107661 - 0.33 10.2 7.1 0.025 13.8 1.2 1.8 2 0 0 2 2 2 0 TMPIT-like protein Ras PF00071.22 ORF10752 - 8.1e-38 129.6 0.0 1.1e-37 129.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF10752 - 6.7e-26 90.9 0.0 1.1e-25 90.1 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF10752 - 3e-08 33.3 0.0 4e-08 32.9 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 ORF10752 - 0.00048 19.6 0.0 0.00055 19.3 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region TniB PF05621.11 ORF10752 - 0.14 11.5 0.0 0.23 10.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein G3P_antiterm PF04309.12 ORF103940 - 1.9e-62 209.7 0.5 2.2e-62 209.5 0.5 1.0 1 0 0 1 1 1 1 Glycerol-3-phosphate responsive antiterminator Phytochelatin_C PF09328.10 ORF103940 - 0.087 12.1 0.0 0.25 10.6 0.0 1.7 1 1 0 2 2 2 0 Domain of unknown function (DUF1984) FMN_dh PF01070.18 ORF103940 - 0.11 11.4 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 FMN-dependent dehydrogenase DUF1995 PF09353.10 ORF101920 - 1.2e-09 38.5 0.0 1.6e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1995) Ribosomal_S3_C PF00189.20 ORF101549 - 1.1e-41 141.2 0.9 2.2e-41 140.3 0.9 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 ORF101549 - 5e-19 67.9 3.6 1.2e-18 66.7 3.6 1.6 1 0 0 1 1 1 1 KH domain KH_4 PF13083.6 ORF101549 - 0.00032 20.5 0.3 0.00082 19.2 0.2 1.7 1 1 0 1 1 1 1 KH domain MRP-S24 PF14955.6 ORF101549 - 0.15 12.0 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S24 TrmB PF01978.19 ORF100189 - 0.014 15.2 0.0 0.046 13.6 0.1 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF2721 PF11026.8 ORF100189 - 0.02 14.8 0.2 0.036 13.9 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) BRI3BP PF14965.6 ORF100189 - 0.05 13.1 0.2 0.095 12.2 0.2 1.5 1 0 0 1 1 1 0 Negative regulator of p53/TP53 BTV_NS2 PF04514.12 NODE_31327_length_695_cov_2.618182_g24817_i0forward_frame_1 - 0.14 11.0 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Bluetongue virus non-structural protein NS2 SPDY PF03771.16 NODE_31327_length_695_cov_2.618182_g24817_i0forward_frame_1 - 0.87 9.6 5.3 1.6 8.7 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF317) TAP42 PF04177.12 NODE_31272_length_696_cov_3.992436_g24770_i0reverse_frame_1 - 0.024 13.8 1.3 0.033 13.3 1.3 1.3 1 0 0 1 1 1 0 TAP42-like family Rubis-subs-bind PF09273.11 NODE_31262_length_696_cov_88.226929_g24760_i0reverse_frame_1 - 1.2e-08 35.7 0.0 1.8e-08 35.1 0.0 1.3 1 0 0 1 1 1 1 Rubisco LSMT substrate-binding PAP_fibrillin PF04755.12 NODE_31242_length_696_cov_248.151286_g20788_i1reverse_frame_1 - 5.2e-05 23.3 0.0 8.2e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 PAP_fibrillin Alpha-amyl_C2 PF07821.12 NODE_31214_length_697_cov_116.232628_g24719_i0reverse_frame_2 - 1.9e-08 34.4 0.0 3.4e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Alpha-amylase C-terminal beta-sheet domain HATPase_c PF02518.26 NODE_31190_length_698_cov_3.656109_g24700_i0reverse_frame_2 - 1.1e-22 80.6 0.0 1.8e-22 80.0 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 NODE_31190_length_698_cov_3.656109_g24700_i0reverse_frame_2 - 6.9e-10 38.8 0.7 1.4e-09 37.8 0.7 1.5 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.6 NODE_31190_length_698_cov_3.656109_g24700_i0reverse_frame_2 - 1.5e-06 28.0 0.0 2.4e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 GHKL domain HATPase_c_2 PF13581.6 NODE_31190_length_698_cov_3.656109_g24700_i0reverse_frame_2 - 0.00018 21.5 0.0 0.0003 20.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Cadherin_2 PF08266.12 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.00042 20.1 0.8 0.00042 20.1 0.8 2.1 2 0 0 2 2 2 1 Cadherin-like PKcGMP_CC PF16808.5 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.0079 16.0 18.5 0.028 14.3 0.1 5.2 2 1 2 4 4 4 1 Coiled-coil N-terminus of cGMP-dependent protein kinase CREPT PF16566.5 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.0093 16.1 2.0 0.0093 16.1 2.0 2.7 1 1 2 3 3 3 1 Cell-cycle alteration and expression-elevated protein in tumour HMMR_N PF15905.5 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.11 12.0 29.6 0.28 10.6 1.8 2.2 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal CENP-F_leu_zip PF10473.9 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.16 11.9 32.2 0.81 9.7 10.2 3.0 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF641 PF04859.12 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.83 10.0 20.2 0.54 10.6 3.2 3.7 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) OmpH PF03938.14 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 0.91 9.9 30.1 0.61 10.4 16.7 3.6 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Spc7 PF08317.11 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 2.7 6.8 30.1 0.22 10.4 5.3 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein Hemagglutinin PF00509.18 NODE_31179_length_698_cov_98.595777_g24689_i0reverse_frame_2 - 7.9 4.8 8.3 4.6 5.5 6.6 1.4 1 1 0 1 1 1 0 Haemagglutinin TNFR_c6 PF00020.18 NODE_31177_length_698_cov_100.953243_g24687_i0forward_frame_2 - 0.096 13.1 3.5 0.45 11.0 3.5 2.2 1 0 0 1 1 1 0 TNFR/NGFR cysteine-rich region DUF3716 PF12511.8 NODE_31135_length_699_cov_109.722892_g23178_i1reverse_frame_3 - 0.18 11.9 9.1 0.41 10.7 9.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3716) GBP_C PF02841.14 ORF98960 - 3.9e-16 59.3 0.2 3.9e-16 59.3 0.2 2.0 1 1 1 2 2 2 1 Guanylate-binding protein, C-terminal domain Tup_N PF08581.10 ORF98960 - 0.065 13.5 1.0 0.065 13.5 1.0 3.6 2 1 1 3 3 3 0 Tup N-terminal Cep57_CLD_2 PF14197.6 ORF98960 - 0.29 11.3 6.4 0.39 10.9 2.8 2.4 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 ABC_tran PF00005.27 ORF98675 - 1.6e-37 129.0 0.0 2.7e-37 128.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF98675 - 1.2e-09 38.4 2.2 1.1e-05 25.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF98675 - 1.1e-06 28.3 0.0 3.5e-06 26.6 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 ORF98675 - 5.2e-05 22.9 0.0 0.00012 21.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 ORF98675 - 0.00011 22.2 0.0 0.00027 20.9 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 ORF98675 - 0.00038 20.9 0.1 0.00085 19.7 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.23 ORF98675 - 0.001 19.1 0.1 0.0014 18.7 0.1 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 ORF98675 - 0.0036 17.8 0.0 0.0052 17.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 ORF98675 - 0.0058 16.8 0.1 0.093 13.0 0.1 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit NACHT PF05729.12 ORF98675 - 0.0094 15.9 0.5 0.51 10.2 0.1 2.9 2 1 1 3 3 3 1 NACHT domain AAA_22 PF13401.6 ORF98675 - 0.013 15.8 0.1 0.043 14.1 0.1 2.0 1 1 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 ORF98675 - 0.04 14.0 0.1 0.1 12.6 0.1 1.9 1 1 0 1 1 1 0 Dynamin family IstB_IS21 PF01695.17 ORF98675 - 0.045 13.5 0.1 0.31 10.8 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.6 ORF98675 - 0.07 12.8 0.3 0.18 11.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 ORF98675 - 0.084 12.4 0.1 0.3 10.6 0.0 1.9 2 1 1 3 3 3 0 AAA domain AAA_28 PF13521.6 ORF98675 - 0.11 12.7 0.3 0.3 11.3 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 ORF98675 - 0.13 11.2 0.0 0.58 9.0 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain DUF87 PF01935.17 ORF98675 - 0.21 11.7 0.1 0.36 10.9 0.1 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain ORF6C PF10552.9 ORF96124 - 0.042 13.9 0.1 0.09 12.9 0.1 1.5 1 0 0 1 1 1 0 ORF6C domain OmpH PF03938.14 ORF94796 - 0.026 14.8 4.2 0.037 14.4 4.2 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Ras PF00071.22 ORF93935 - 7.2e-53 178.5 0.5 9.1e-53 178.2 0.5 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF93935 - 1.5e-30 105.9 0.1 2.3e-30 105.2 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF93935 - 3.9e-10 39.5 0.4 5.3e-10 39.0 0.4 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF93935 - 2.3e-05 24.5 0.1 5.4e-05 23.2 0.1 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF93935 - 0.00037 19.9 0.4 0.00051 19.5 0.3 1.5 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF93935 - 0.0032 17.4 0.1 0.066 13.1 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_7 PF12775.7 ORF93935 - 0.0052 16.3 0.5 0.012 15.2 0.0 1.7 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_22 PF13401.6 ORF93935 - 0.0061 16.8 0.0 0.013 15.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain DAP3 PF10236.9 ORF93935 - 0.032 13.4 0.0 0.068 12.3 0.0 1.5 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 cobW PF02492.19 ORF93935 - 0.07 12.7 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 ORF93935 - 0.095 12.6 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_29 PF13555.6 ORF93935 - 0.12 12.1 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 ORF93935 - 0.18 12.3 0.6 0.26 11.8 0.4 1.6 1 1 0 1 1 1 0 ABC transporter Aha1_N PF09229.11 ORF9320 - 1.3e-23 83.7 7.7 1.3e-23 83.7 7.7 2.0 1 1 1 2 2 2 1 Activator of Hsp90 ATPase, N-terminal Prominin PF05478.11 ORF9320 - 6.2 4.6 8.2 8.4 4.2 8.2 1.1 1 0 0 1 1 1 0 Prominin AAA_23 PF13476.6 ORF9320 - 9.9 6.6 19.6 14 6.1 19.6 1.3 1 0 0 1 1 1 0 AAA domain Radial_spoke_3 PF06098.11 ORF91207 - 1.2e-08 34.6 1.3 1.8e-08 34.0 1.3 1.3 1 0 0 1 1 1 1 Radial spoke protein 3 DUF4378 PF14309.6 ORF91207 - 0.063 13.7 0.2 0.12 12.8 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4378) PspA_IM30 PF04012.12 ORF87602 - 3.3e-57 193.6 28.9 3.7e-57 193.5 28.9 1.0 1 0 0 1 1 1 1 PspA/IM30 family SLED PF12140.8 ORF87602 - 0.038 14.5 0.8 0.072 13.6 0.6 1.6 1 1 0 1 1 1 0 SLED domain DELLA PF12041.8 ORF87602 - 0.045 13.6 5.3 0.54 10.2 0.2 2.9 1 1 2 3 3 3 0 Transcriptional regulator DELLA protein N terminal Inhibitor_I48 PF10467.9 ORF87602 - 0.098 12.5 0.1 0.36 10.7 0.1 1.8 2 0 0 2 2 2 0 Peptidase inhibitor clitocypin DUF4472 PF14739.6 ORF87602 - 0.59 10.9 18.3 0.53 11.0 1.9 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF4472) GAGA_bind PF06217.12 ORF87602 - 1.6 9.0 6.1 1.9 8.7 6.1 1.2 1 0 0 1 1 1 0 GAGA binding protein-like family VSG_B PF13206.6 ORF87602 - 2.5 7.3 13.1 0.78 8.9 9.9 1.6 1 1 1 2 2 2 0 Trypanosomal VSG domain ABC_tran_CTD PF16326.5 ORF87602 - 9.4 6.6 24.0 0.56 10.5 2.7 4.7 2 2 3 5 5 5 0 ABC transporter C-terminal domain SH3_4 PF06347.13 ORF87481 - 3.8e-13 49.0 0.8 7.4e-06 25.7 0.1 2.7 2 0 0 2 2 2 2 Bacterial SH3 domain SH3_3 PF08239.11 ORF87481 - 3.9e-13 49.5 0.1 1.4e-05 25.3 0.0 3.3 2 1 0 2 2 2 2 Bacterial SH3 domain Chor_lyase PF04345.13 ORF87481 - 0.14 11.8 0.0 8.3 6.0 0.0 2.1 2 0 0 2 2 2 0 Chorismate lyase Pepsin-I3 PF06394.13 ORF85908 - 0.0054 16.9 1.8 0.046 13.9 0.3 2.5 2 0 0 2 2 2 1 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF85908 - 0.09 13.1 4.5 0.43 10.9 0.2 3.4 2 2 2 4 4 4 0 HalX domain Tae4 PF14113.6 ORF85908 - 0.19 11.9 2.1 1.8 8.8 0.0 2.2 2 0 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 PCMT PF01135.19 ORF8132 - 4.4e-67 225.9 0.0 5.1e-67 225.7 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 ORF8132 - 3.4e-10 39.9 0.1 1.1e-09 38.3 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF8132 - 1.4e-09 38.5 0.0 1.2e-08 35.6 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF8132 - 5.1e-09 36.2 0.0 7.2e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF8132 - 6e-07 29.0 0.0 8.4e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.6 ORF8132 - 2.1e-06 27.8 0.0 3.4e-06 27.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF8132 - 6.5e-06 26.7 0.0 3e-05 24.6 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase domain CMAS PF02353.20 ORF8132 - 1e-05 25.0 0.0 1.4e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 ORF8132 - 0.0001 21.8 0.0 0.00016 21.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 ORF8132 - 0.0001 22.3 0.0 0.00017 21.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 ORF8132 - 0.00021 20.8 0.1 0.0004 19.9 0.1 1.4 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 ORF8132 - 0.00029 20.4 0.0 0.00049 19.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 ORF8132 - 0.00059 19.5 0.1 0.0015 18.2 0.0 1.7 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltr_RsmB-F PF01189.17 ORF8132 - 0.0047 16.6 0.0 0.0077 15.9 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F GCD14 PF08704.10 ORF8132 - 0.0066 16.2 0.0 0.0097 15.6 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_12 PF08242.12 ORF8132 - 0.0089 16.8 0.0 0.042 14.6 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain V_cholerae_RfbT PF05575.11 ORF8132 - 0.017 14.4 0.1 0.022 14.0 0.1 1.1 1 0 0 1 1 1 0 Vibrio cholerae RfbT protein Fibrillarin PF01269.17 ORF8132 - 0.031 13.4 0.0 0.047 12.8 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin Methyltransf_9 PF08003.11 ORF8132 - 0.033 13.1 0.0 0.045 12.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) N6_N4_Mtase PF01555.18 ORF8132 - 0.034 13.8 0.0 0.51 10.0 0.0 2.1 2 0 0 2 2 2 0 DNA methylase GidB PF02527.15 ORF8132 - 0.041 13.2 0.0 0.069 12.5 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_24 PF13578.6 ORF8132 - 0.043 14.8 0.0 0.082 13.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain NOA36 PF06524.12 ORF8132 - 0.065 12.6 1.0 0.089 12.1 1.0 1.1 1 0 0 1 1 1 0 NOA36 protein RrnaAD PF00398.20 ORF8132 - 0.071 12.2 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase ACP_syn_III_C PF08541.10 ORF8132 - 0.077 13.2 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Peptidase_M23_N PF18421.1 ORF8132 - 0.14 12.0 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Peptidase family M23 N-terminal domain Ins134_P3_kin_N PF17927.1 ORF8132 - 0.16 12.4 0.0 0.39 11.1 0.0 1.7 1 0 0 1 1 1 0 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain DUF3361 PF11841.8 ORF7868 - 0.00011 22.1 8.8 0.0025 17.8 0.2 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF3361) Feld-I_B PF09252.10 ORF7868 - 0.0017 18.2 1.2 0.56 10.2 0.3 2.6 2 0 0 2 2 2 2 Allergen Fel d I-B chain MMS19_N PF14500.6 ORF7868 - 0.0026 17.4 1.2 0.025 14.2 0.2 2.4 1 1 1 2 2 2 1 Dos2-interacting transcription regulator of RNA-Pol-II Cnd1 PF12717.7 ORF7868 - 0.0033 17.5 2.0 0.0033 17.5 2.0 2.9 1 1 2 3 3 3 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 ORF7868 - 0.11 12.9 0.0 7.7 7.0 0.0 2.6 2 1 1 3 3 3 0 HEAT repeats DoxA PF07680.11 ORF7868 - 0.55 10.2 3.8 2.7 7.9 0.2 2.4 2 0 0 2 2 2 0 TQO small subunit DoxA CS PF04969.16 ORF78390 - 1.7e-09 38.6 0.3 3.1e-09 37.7 0.3 1.5 1 0 0 1 1 1 1 CS domain Siah-Interact_N PF09032.11 ORF78390 - 8.7e-07 29.2 3.4 8.7e-07 29.2 3.4 1.9 2 0 0 2 2 2 1 Siah interacting protein, N terminal SGS PF05002.15 ORF78390 - 0.045 13.9 0.3 0.045 13.9 0.3 2.2 2 1 0 2 2 2 0 SGS domain IFN-gamma PF00714.17 ORF78390 - 3.5 7.5 7.5 2.1 8.2 1.8 2.8 2 1 1 3 3 3 0 Interferon gamma ERp29 PF07749.12 ORF78390 - 4.4 8.3 11.4 1.5 9.8 4.9 2.8 2 1 1 3 3 3 0 Endoplasmic reticulum protein ERp29, C-terminal domain Rho_Binding PF08912.11 ORF78390 - 6.2 7.7 11.7 8.1 7.3 2.2 3.1 2 1 1 3 3 3 0 Rho Binding RabGAP-TBC PF00566.18 ORF75966 - 3.4e-21 75.9 1.0 4.1e-21 75.6 1.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain AAA_28 PF13521.6 ORF7348 - 0.042 14.1 0.0 0.062 13.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain IQ PF00612.27 ORF71428 - 0.0018 17.9 0.9 0.0035 17.0 0.9 1.5 1 0 0 1 1 1 1 IQ calmodulin-binding motif DUF1674 PF07896.12 ORF63785 - 4.2e-08 33.5 1.2 9.8e-08 32.4 1.2 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1674) Aldedh PF00171.22 ORF62080 - 2.8e-11 42.6 1.1 1.7e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF2476 PF10630.9 ORF62080 - 0.14 12.3 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2476) CIA30 PF08547.12 ORF56640 - 1.6e-09 38.0 0.0 2.1e-09 37.6 0.0 1.2 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) DUF4149 PF13664.6 ORF561 - 0.17 12.2 3.5 0.29 11.5 3.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4149) PNP_UDP_1 PF01048.20 ORF55793 - 2.6e-49 167.6 1.9 2.9e-49 167.4 1.9 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily IBR PF01485.21 ORF53353 - 0.00096 19.3 11.6 0.00096 19.3 11.6 2.9 3 0 0 3 3 3 1 IBR domain, a half RING-finger domain Endotoxin_N PF03945.14 ORF53353 - 0.031 14.0 0.7 0.058 13.1 0.5 1.5 2 0 0 2 2 2 0 delta endotoxin, N-terminal domain zinc_ribbon_4 PF13717.6 ORF53353 - 0.26 11.2 12.4 0.9 9.5 0.1 3.5 3 0 0 3 3 3 0 zinc-ribbon domain LRR_6 PF13516.6 ORF51404 - 1.4e-22 77.7 7.7 0.001 18.9 0.0 7.3 7 0 0 7 7 7 5 Leucine Rich repeat LRR_1 PF00560.33 ORF51404 - 0.0016 18.7 0.3 7.3 7.6 0.1 4.0 4 0 0 4 4 4 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF51404 - 0.03 14.7 4.6 1.7 9.2 0.1 3.3 3 2 0 3 3 3 0 Leucine Rich repeats (2 copies) Aldedh PF00171.22 ORF46850 - 2.8e-11 42.6 1.1 1.7e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF2476 PF10630.9 ORF46850 - 0.14 12.3 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2476) Vanabin-2 PF11437.8 ORF46839 - 2.9 8.1 13.1 3.7 7.8 8.1 2.5 2 1 0 2 2 2 0 Vanadium-binding protein 2 GST_N PF02798.20 ORF4605 - 1.1e-14 54.5 0.1 2.5e-14 53.4 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF4605 - 1.6e-11 44.3 0.1 3.3e-11 43.3 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 ORF4605 - 2.7e-11 43.7 0.0 6.5e-11 42.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 ORF4605 - 1.3e-07 31.8 0.0 2.8e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF4605 - 5.8e-07 29.6 0.2 1.2e-06 28.6 0.2 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF4605 - 0.0006 19.8 0.0 0.0012 18.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 ORF4605 - 0.0035 18.0 0.0 0.013 16.2 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase N-terminal domain GST_C_6 PF17171.4 ORF4605 - 0.013 15.3 0.0 0.034 13.9 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Ion_trans PF00520.31 ORF45169 - 2.5e-12 46.6 13.5 3.2e-12 46.2 13.5 1.1 1 0 0 1 1 1 1 Ion transport protein DUF3886 PF13025.6 ORF45169 - 0.0014 18.7 1.7 0.0021 18.2 1.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3886) HemY_N PF07219.13 ORF45169 - 0.15 12.3 3.5 0.25 11.5 0.0 2.5 3 0 0 3 3 3 0 HemY protein N-terminus DUF4051 PF13260.6 ORF43896 - 0.0026 17.4 1.2 0.0044 16.7 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF4051) Ribul_P_3_epim PF00834.19 ORF43803 - 3.1e-64 216.0 1.2 3.7e-64 215.8 1.2 1.0 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family Pepsin-I3 PF06394.13 ORF41165 - 0.0054 16.9 1.8 0.046 13.9 0.3 2.5 2 0 0 2 2 2 1 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF41165 - 0.09 13.1 4.5 0.43 10.9 0.2 3.4 2 2 2 4 4 4 0 HalX domain Tae4 PF14113.6 ORF41165 - 0.19 11.9 2.1 1.8 8.8 0.0 2.2 2 0 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 LRR_6 PF13516.6 ORF41110 - 1.4e-22 77.7 7.7 0.001 18.9 0.0 7.3 7 0 0 7 7 7 5 Leucine Rich repeat LRR_1 PF00560.33 ORF41110 - 0.0016 18.7 0.3 7.3 7.6 0.1 4.0 4 0 0 4 4 4 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF41110 - 0.03 14.7 4.6 1.7 9.2 0.1 3.3 3 2 0 3 3 3 0 Leucine Rich repeats (2 copies) FAM70 PF14967.6 ORF40359 - 0.72 9.3 4.7 0.68 9.3 3.5 1.5 1 1 0 1 1 1 0 FAM70 protein ABC_tran PF00005.27 ORF40129 - 2.1e-20 73.6 0.0 3.1e-20 73.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 ORF40129 - 1.1e-11 45.1 0.8 1.6e-06 28.2 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 ORF40129 - 6.2e-08 32.4 0.0 0.00011 21.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain NACHT PF05729.12 ORF40129 - 9.4e-05 22.4 0.0 0.00012 22.0 0.0 1.5 1 1 0 1 1 1 1 NACHT domain AAA_33 PF13671.6 ORF40129 - 0.0011 19.1 0.0 0.0014 18.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain DUF3584 PF12128.8 ORF40129 - 0.0023 15.6 0.0 0.0033 15.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) AAA_16 PF13191.6 ORF40129 - 0.0029 18.0 0.1 0.0051 17.2 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 ORF40129 - 0.0031 17.3 0.0 0.0053 16.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 ORF40129 - 0.01 15.4 0.0 0.017 14.7 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 ORF40129 - 0.02 15.2 0.1 0.072 13.4 0.1 1.9 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 ORF40129 - 0.028 13.6 0.0 0.049 12.8 0.0 1.4 2 0 0 2 2 2 0 NB-ARC domain AAA_14 PF13173.6 ORF40129 - 0.029 14.4 0.0 0.14 12.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 ORF40129 - 0.03 14.9 0.0 0.094 13.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 ORF40129 - 0.031 14.3 0.0 0.074 13.1 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_23 PF13476.6 ORF40129 - 0.034 14.6 0.0 0.054 14.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 ORF40129 - 0.038 13.7 0.0 0.061 13.0 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 ORF40129 - 0.044 13.5 0.0 0.23 11.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 ORF40129 - 0.048 13.6 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B FtsK_SpoIIIE PF01580.18 ORF40129 - 0.056 12.8 0.0 0.09 12.1 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_28 PF13521.6 ORF40129 - 0.057 13.6 0.0 0.1 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 ORF40129 - 0.064 12.2 0.0 0.096 11.6 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 ORF40129 - 0.087 12.6 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Thymidylate_kin PF02223.17 ORF40129 - 0.089 12.5 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Thymidylate kinase AAA_17 PF13207.6 ORF40129 - 0.11 12.9 0.0 0.21 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 ORF40129 - 0.12 12.5 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase Arf PF00025.21 ORF40129 - 0.15 11.5 0.1 0.28 10.6 0.1 1.4 1 0 0 1 1 1 0 ADP-ribosylation factor family BLUF PF04940.12 ORF38478 - 1.8e-05 24.7 0.2 4.9e-05 23.4 0.2 1.7 1 0 0 1 1 1 1 Sensors of blue-light using FAD NAPRTase_N PF17767.1 ORF34416 - 0.1 13.0 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PBP1_TM PF14812.6 ORF31961 - 0.11 12.8 4.6 0.96 9.9 1.6 2.5 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Nop PF01798.18 ORF30355 - 4.6e-61 206.2 2.5 5.5e-61 206.0 2.5 1.1 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin ANAPC4_WD40 PF12894.7 ORF30077 - 1.3e-06 28.6 0.0 4.8e-05 23.6 0.0 2.4 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 ORF30077 - 0.1 13.5 0.0 0.77 10.7 0.0 2.4 3 0 0 3 3 3 0 WD domain, G-beta repeat UPF0029 PF01205.19 ORF29169 - 2.3e-18 66.4 0.0 3.9e-18 65.7 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 zf-CCCH PF00642.24 ORF28396 - 5e-19 67.7 14.6 7.1e-11 41.7 3.2 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 ORF28396 - 4.6e-08 32.9 16.7 7.5e-07 29.0 3.9 3.0 2 1 0 2 2 2 2 Zinc finger domain zf-CCCH_2 PF14608.6 ORF28396 - 6.1e-06 26.5 12.1 0.0032 17.9 3.9 2.3 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger zf-CCCH_4 PF18044.1 ORF28396 - 1.3e-05 24.9 11.6 3.1e-05 23.7 3.0 2.5 2 0 0 2 2 2 2 CCCH-type zinc finger Torus PF16131.5 ORF28396 - 8.9 7.1 13.4 5.6 7.7 1.2 3.0 2 1 1 3 3 3 0 Torus domain APH PF01636.23 ORF28302 - 1.3e-27 97.3 3.6 1.9e-27 96.8 3.6 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family DUF1679 PF07914.11 ORF28302 - 0.022 13.7 0.0 0.025 13.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) Fructosamin_kin PF03881.14 ORF28302 - 0.023 13.9 0.0 0.042 13.0 0.0 1.4 2 0 0 2 2 2 0 Fructosamine kinase Pkinase PF00069.25 ORF24967 - 6.8e-49 166.6 0.1 8.8e-49 166.2 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF24967 - 9.6e-36 123.4 0.0 1.2e-35 123.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF24967 - 6.1e-10 38.9 0.0 7.6e-10 38.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF24967 - 0.00048 19.0 0.0 0.00066 18.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF24967 - 0.003 16.6 0.1 0.004 16.1 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF24967 - 0.016 14.6 0.0 0.021 14.2 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family LRR_6 PF13516.6 ORF21864 - 1.4e-22 77.7 7.7 0.001 18.9 0.0 7.3 7 0 0 7 7 7 5 Leucine Rich repeat LRR_1 PF00560.33 ORF21864 - 0.0016 18.7 0.3 7.3 7.6 0.1 4.0 4 0 0 4 4 4 2 Leucine Rich Repeat LRR_4 PF12799.7 ORF21864 - 0.03 14.7 4.6 1.7 9.2 0.1 3.3 3 2 0 3 3 3 0 Leucine Rich repeats (2 copies) OKR_DC_1_C PF03711.15 ORF21733 - 7.9e-47 158.9 0.9 1.2e-46 158.3 0.9 1.3 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain OKR_DC_1 PF01276.20 ORF21733 - 1.2e-24 86.9 0.1 1.5e-24 86.5 0.1 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain DUF4149 PF13664.6 ORF152868 - 0.17 12.2 3.5 0.29 11.5 3.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4149) DUF4452 PF14618.6 ORF152282 - 0.066 13.1 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4452) Defensin_4 PF07936.12 ORF152282 - 0.31 11.0 2.2 0.84 9.6 2.2 1.8 1 0 0 1 1 1 0 Potassium-channel blocking toxin OTU PF02338.19 ORF150756 - 0.037 14.5 0.8 0.1 13.1 0.8 1.9 1 1 0 1 1 1 0 OTU-like cysteine protease Nup_retrotrp_bd PF10599.9 ORF146949 - 0.094 13.4 0.7 0.094 13.4 0.7 2.1 2 1 0 2 2 2 0 Retro-transposon transporting motif HC2 PF07382.11 ORF145507 - 4.7e-11 43.1 0.0 7.1e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 ASFV_J13L PF05568.11 ORF145507 - 2.1e-07 30.9 16.3 0.029 14.1 1.7 3.8 1 1 2 3 3 3 3 African swine fever virus J13L protein VCX_VCY PF15231.6 ORF145507 - 8.3 7.1 54.6 66 4.2 10.2 3.3 1 1 2 3 3 3 0 Variable charge X/Y family MORN PF02493.20 ORF144742 - 1.6e-53 175.5 71.8 4.5e-08 32.5 1.2 10.5 10 1 0 10 10 10 9 MORN repeat Tudor_2 PF18104.1 ORF144742 - 0.087 12.5 0.2 0.087 12.5 0.2 6.3 7 0 0 7 7 7 0 Jumonji domain-containing protein 2A Tudor domain RsgA_GTPase PF03193.16 ORF143364 - 3e-36 124.8 0.0 4.4e-36 124.3 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF143364 - 1.9e-05 24.7 0.0 3.4e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF143364 - 3.1e-05 23.6 0.1 0.18 11.3 0.1 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 ORF143364 - 7e-05 22.5 0.0 0.024 14.2 0.1 2.5 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain Ras PF00071.22 ORF143364 - 8.1e-05 22.3 0.2 0.16 11.5 0.0 2.2 2 0 0 2 2 2 2 Ras family Arf PF00025.21 ORF143364 - 0.0036 16.8 0.3 0.014 14.9 0.1 2.0 2 1 1 3 3 3 1 ADP-ribosylation factor family PduV-EutP PF10662.9 ORF143364 - 0.0057 16.4 0.1 1.1 9.0 0.0 2.3 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 ORF143364 - 0.02 15.1 0.5 0.18 12.1 0.1 2.5 3 0 0 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 ORF143364 - 0.02 15.4 0.2 0.036 14.6 0.2 1.4 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 ORF143364 - 0.022 14.5 0.0 0.046 13.5 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_16 PF13191.6 ORF143364 - 0.029 14.8 1.3 0.07 13.5 0.2 2.0 2 0 0 2 2 2 0 AAA ATPase domain MMR_HSR1_Xtn PF16897.5 ORF143364 - 0.055 13.5 0.0 0.096 12.7 0.0 1.3 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain cobW PF02492.19 ORF143364 - 0.072 12.7 0.8 6.9 6.2 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain IstB_IS21 PF01695.17 ORF143364 - 0.076 12.7 0.1 0.13 12.0 0.1 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein ATP_bind_1 PF03029.17 ORF143364 - 0.081 12.7 0.1 5.3 6.8 0.0 2.9 2 1 1 3 3 3 0 Conserved hypothetical ATP binding protein Septin PF00735.18 ORF143364 - 0.11 11.8 0.1 1.8 7.8 0.0 2.1 2 0 0 2 2 2 0 Septin SfsA_N PF17746.1 ORF143364 - 0.11 12.7 0.0 0.31 11.2 0.0 1.7 1 0 0 1 1 1 0 SfsA N-terminal OB domain AAA_22 PF13401.6 ORF143364 - 0.16 12.3 0.8 0.55 10.5 0.1 2.0 2 0 0 2 2 2 0 AAA domain PARP PF00644.20 ORF140803 - 1.6e-07 31.1 0.1 5.2e-07 29.5 0.0 1.8 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase catalytic domain Ribosomal_L6e PF01159.19 ORF139482 - 0.0038 17.8 0.6 0.0038 17.8 0.6 2.8 3 0 0 3 3 3 2 Ribosomal protein L6e RtcR PF06956.11 ORF139482 - 0.048 13.1 1.8 0.082 12.3 0.5 2.0 1 1 1 2 2 2 0 Regulator of RNA terminal phosphate cyclase CCSMST1 PF15013.6 ORF138994 - 0.085 13.0 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 CCSMST1 family BNIP2 PF12496.8 ORF138701 - 0.01 16.3 0.3 0.018 15.5 0.3 1.5 1 1 0 1 1 1 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 WHEP-TRS PF00458.20 ORF138701 - 0.077 13.2 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 WHEP-TRS domain 40S_SA_C PF16122.5 ORF138005 - 0.045 15.1 0.5 0.045 15.1 0.5 2.2 2 0 0 2 2 2 0 40S ribosomal protein SA C-terminus DUF1722 PF08349.11 ORF137378 - 1.2e-34 119.1 0.1 1.6e-34 118.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1722) zf-RING_2 PF13639.6 ORF137257 - 6.2e-09 36.1 10.0 6.2e-09 36.1 10.0 2.6 2 1 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF137257 - 7.7e-07 29.3 10.4 7.7e-07 29.3 10.4 2.8 2 1 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF137257 - 7.2e-06 25.7 9.0 7.2e-06 25.7 9.0 3.4 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF137257 - 8.1e-06 25.4 7.5 8.1e-06 25.4 7.5 2.4 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF137257 - 0.00037 20.3 9.1 0.00037 20.3 9.1 3.2 2 2 0 2 2 2 1 PHD-finger zf-RING_11 PF17123.5 ORF137257 - 0.00038 20.1 7.6 0.00047 19.8 4.0 2.9 2 0 0 2 2 2 1 RING-like zinc finger CK2S PF15011.6 ORF137257 - 0.00044 20.2 0.6 0.00044 20.2 0.6 1.6 2 0 0 2 2 2 1 Casein Kinase 2 substrate zf-RING_5 PF14634.6 ORF137257 - 0.00045 20.1 10.5 0.00045 20.1 10.5 3.1 2 1 0 2 2 2 1 zinc-RING finger domain GlutR_dimer PF00745.20 ORF137257 - 0.00074 19.9 0.1 0.0019 18.6 0.1 1.7 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain zf-B_box PF00643.24 ORF137257 - 0.0047 17.1 14.4 0.0047 17.1 14.4 3.4 3 1 0 3 3 3 1 B-box zinc finger C1_1 PF00130.22 ORF137257 - 0.0076 16.1 8.5 0.0076 16.1 8.5 3.4 2 2 1 3 3 3 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-ANAPC11 PF12861.7 ORF137257 - 0.008 16.2 4.6 0.008 16.2 4.6 2.3 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger DUF4259 PF14078.6 ORF137257 - 0.026 15.3 1.1 0.15 12.8 1.1 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4259) DUF1664 PF07889.12 ORF137257 - 0.15 12.1 2.0 0.36 10.9 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) SieB PF14163.6 ORF137257 - 3.1 7.3 6.9 1.9 8.0 1.8 2.4 3 0 0 3 3 3 0 Super-infection exclusion protein B Phage_integrase PF00589.22 ORF134556 - 0.043 13.6 0.0 0.31 10.8 0.0 2.2 2 1 0 2 2 2 0 Phage integrase family CorC_HlyC PF03471.17 ORF134016 - 2.5e-23 81.9 0.1 5.7e-23 80.7 0.1 1.6 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 ORF134016 - 8e-07 29.4 0.5 0.001 19.5 0.1 2.8 3 0 0 3 3 3 2 CBS domain Bac_globin PF01152.21 ORF133126 - 0.023 14.8 0.0 0.041 14.0 0.0 1.3 1 0 0 1 1 1 0 Bacterial-like globin ACOX PF01756.19 ORF132783 - 1.2e-31 109.7 2.2 1.9e-31 109.0 2.2 1.3 1 0 0 1 1 1 1 Acyl-CoA oxidase LRR_8 PF13855.6 ORF132783 - 0.0024 17.6 2.8 0.78 9.5 0.1 2.6 3 0 0 3 3 3 2 Leucine rich repeat Asp PF00026.23 ORF132307 - 3.1e-11 43.3 0.0 3.9e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF132307 - 0.00073 19.3 0.0 0.0012 18.6 0.0 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks94.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks94.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks94.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks94.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:42 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- KN17_SH3 PF18131.1 ORF127197 - 2.2e-20 72.5 2.7 2.4e-19 69.2 0.3 2.2 2 0 0 2 2 2 1 KN17 SH3-like C-terminal domain DUF438 PF04282.13 ORF127197 - 0.035 14.1 1.3 0.068 13.1 0.0 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF438) Herpes_U47 PF05467.11 ORF127197 - 0.17 10.0 1.0 0.2 9.7 1.0 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 DUF4149 PF13664.6 ORF125700 - 0.17 12.2 3.5 0.29 11.5 3.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4149) eIF3_N PF09440.10 ORF120816 - 0.12 12.8 2.2 0.32 11.4 0.3 2.2 1 1 1 2 2 2 0 eIF3 subunit 6 N terminal domain Pkinase PF00069.25 ORF119072 - 6.8e-49 166.6 0.1 8.8e-49 166.2 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF119072 - 9.6e-36 123.4 0.0 1.2e-35 123.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF119072 - 6.1e-10 38.9 0.0 7.6e-10 38.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 ORF119072 - 0.00048 19.0 0.0 0.00066 18.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 ORF119072 - 0.003 16.6 0.1 0.004 16.1 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 ORF119072 - 0.016 14.6 0.0 0.021 14.2 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Sulfatase PF00884.23 ORF11750 - 6.9e-14 51.9 0.0 1.1e-13 51.3 0.0 1.3 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 ORF11750 - 0.018 15.8 0.0 0.027 15.2 0.0 1.3 1 0 0 1 1 1 0 C-terminal region of aryl-sulfatase Aldedh PF00171.22 ORF115751 - 2.8e-11 42.6 1.1 1.7e-05 23.5 0.0 2.1 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF2476 PF10630.9 ORF115751 - 0.14 12.3 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2476) Pkinase PF00069.25 ORF115344 - 7.6e-65 218.9 0.1 8.5e-65 218.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF115344 - 1.6e-31 109.5 0.0 2.1e-31 109.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 ORF115344 - 9.6e-07 28.4 0.0 1.3e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF115344 - 0.0049 16.2 0.0 0.0073 15.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 ORF115344 - 0.13 12.2 0.1 0.26 11.2 0.0 1.4 1 1 0 1 1 1 0 Phosphotransferase enzyme family tRNA_bind PF01588.20 ORF111785 - 5.2e-23 81.0 0.0 7.7e-23 80.4 0.0 1.3 1 0 0 1 1 1 1 Putative tRNA binding domain Spike_NTD PF16451.5 ORF110386 - 0.065 12.6 0.1 0.086 12.2 0.1 1.2 1 0 0 1 1 1 0 Spike glycoprotein N-terminal domain VWA_2 PF13519.6 ORF110386 - 0.094 13.4 0.0 0.23 12.1 0.0 1.6 1 0 0 1 1 1 0 von Willebrand factor type A domain DUF2654 PF10849.8 ORF110386 - 0.89 9.8 5.3 0.25 11.6 0.8 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2654) Pepsin-I3 PF06394.13 ORF110162 - 0.0054 16.9 1.8 0.046 13.9 0.3 2.5 2 0 0 2 2 2 1 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF110162 - 0.09 13.1 4.5 0.43 10.9 0.2 3.4 2 2 2 4 4 4 0 HalX domain Tae4 PF14113.6 ORF110162 - 0.19 11.9 2.1 1.8 8.8 0.0 2.2 2 0 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 MYO10_CC PF16735.5 ORF108321 - 0.051 13.7 0.1 0.19 11.8 0.1 2.0 1 0 0 1 1 1 0 Unconventional myosin-X coiled coil domain ASH PF15780.5 ORF107460 - 3.6e-05 23.9 0.0 1.2 9.4 0.0 3.1 2 1 1 3 3 3 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin PapD-like PF14874.6 ORF107460 - 0.00089 19.4 0.0 0.87 9.8 0.0 2.6 2 1 0 2 2 2 2 Flagellar-associated PapD-like DUF2415 PF10313.9 ORF107460 - 0.19 11.7 0.1 0.69 9.9 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein domain (DUF2415) D-ser_dehydrat PF14031.6 ORF107276 - 3.3 8.4 4.9 28 5.5 0.4 2.2 2 0 0 2 2 2 0 Putative serine dehydratase domain zf-RING_2 PF13639.6 ORF106996 - 6.2e-09 36.1 10.0 6.2e-09 36.1 10.0 2.6 2 1 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 ORF106996 - 7.7e-07 29.3 10.4 7.7e-07 29.3 10.4 2.8 2 1 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 ORF106996 - 7.2e-06 25.7 9.0 7.2e-06 25.7 9.0 3.4 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 ORF106996 - 8.1e-06 25.4 7.5 8.1e-06 25.4 7.5 2.4 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type PHD PF00628.29 ORF106996 - 0.00037 20.3 9.1 0.00037 20.3 9.1 3.2 2 2 0 2 2 2 1 PHD-finger zf-RING_11 PF17123.5 ORF106996 - 0.00038 20.1 7.6 0.00047 19.8 4.0 2.9 2 0 0 2 2 2 1 RING-like zinc finger CK2S PF15011.6 ORF106996 - 0.00044 20.2 0.6 0.00044 20.2 0.6 1.6 2 0 0 2 2 2 1 Casein Kinase 2 substrate zf-RING_5 PF14634.6 ORF106996 - 0.00045 20.1 10.5 0.00045 20.1 10.5 3.1 2 1 0 2 2 2 1 zinc-RING finger domain GlutR_dimer PF00745.20 ORF106996 - 0.00074 19.9 0.1 0.0019 18.6 0.1 1.7 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain zf-B_box PF00643.24 ORF106996 - 0.0047 17.1 14.4 0.0047 17.1 14.4 3.4 3 1 0 3 3 3 1 B-box zinc finger C1_1 PF00130.22 ORF106996 - 0.0076 16.1 8.5 0.0076 16.1 8.5 3.4 2 2 1 3 3 3 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-ANAPC11 PF12861.7 ORF106996 - 0.008 16.2 4.6 0.008 16.2 4.6 2.3 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger DUF4259 PF14078.6 ORF106996 - 0.026 15.3 1.1 0.15 12.8 1.1 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4259) DUF1664 PF07889.12 ORF106996 - 0.15 12.1 2.0 0.36 10.9 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) SieB PF14163.6 ORF106996 - 3.1 7.3 6.9 1.9 8.0 1.8 2.4 3 0 0 3 3 3 0 Super-infection exclusion protein B IQ PF00612.27 ORF105449 - 0.0018 17.9 0.9 0.0035 17.0 0.9 1.5 1 0 0 1 1 1 1 IQ calmodulin-binding motif DUF4744 PF15918.5 ORF105424 - 2.7 8.9 7.5 0.38 11.6 3.0 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4744) DUF1583 PF07622.11 ORF104064 - 0.31 9.7 0.0 0.42 9.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1583) TTL PF03133.15 ORF103400 - 7.4e-24 84.4 0.0 9.6e-24 84.0 0.0 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 ORF103400 - 8e-08 31.8 0.1 1.2e-07 31.3 0.1 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 ORF103400 - 0.0079 15.5 0.0 0.015 14.5 0.0 1.5 1 1 0 1 1 1 1 Sugar-transfer associated ATP-grasp Aa_trans PF01490.18 ORF102002 - 5.8e-16 58.2 6.5 6.7e-16 58.0 6.5 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein DUF3778 PF12620.8 ORF102002 - 0.016 14.8 0.0 0.093 12.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3778) Pepsin-I3 PF06394.13 ORF101238 - 0.0054 16.9 1.8 0.046 13.9 0.3 2.5 2 0 0 2 2 2 1 Pepsin inhibitor-3-like repeated domain HalX PF08663.10 ORF101238 - 0.09 13.1 4.5 0.43 10.9 0.2 3.4 2 2 2 4 4 4 0 HalX domain Tae4 PF14113.6 ORF101238 - 0.19 11.9 2.1 1.8 8.8 0.0 2.2 2 0 0 2 2 2 0 Type VI secretion system (T6SS), amidase effector protein 4 Ephrin_rec_like PF07699.13 NODE_31443_length_692_cov_52.675799_g24917_i0forward_frame_1 - 0.00012 21.7 9.8 0.0011 18.7 2.3 2.8 2 0 0 2 2 2 2 Putative ephrin-receptor like CPBP PF02517.16 NODE_31373_length_693_cov_379.948328_g24853_i0forward_frame_1 - 0.0016 18.8 0.9 0.0034 17.7 0.9 1.5 1 0 0 1 1 1 1 CPBP intramembrane metalloprotease Mito_carr PF00153.27 NODE_31357_length_694_cov_84.345979_g24841_i0reverse_frame_3 - 4.2e-36 122.7 1.4 4.3e-18 65.0 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein Molybdopterin PF00384.22 NODE_31327_length_695_cov_2.618182_g24817_i0forward_frame_2 - 1.1e-43 149.9 0.0 1.2e-43 149.7 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.16 NODE_31327_length_695_cov_2.618182_g24817_i0forward_frame_2 - 4.4e-08 33.0 0.1 7.9e-08 32.2 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain MSA_2 PF00985.17 NODE_31290_length_695_cov_330.596970_g24784_i0forward_frame_3 - 5.4 7.4 4.5 3.1 8.1 1.3 1.9 2 0 0 2 2 2 0 Merozoite Surface Antigen 2 (MSA-2) family zf-C2H2_7 PF15269.6 NODE_31286_length_695_cov_662.345455_g24277_i1forward_frame_3 - 0.043 13.9 0.0 0.043 13.9 0.0 2.2 2 0 0 2 2 2 0 Zinc-finger MotB_plug PF13677.6 NODE_31276_length_696_cov_2.527988_g24774_i0reverse_frame_3 - 0.1 12.2 2.1 0.11 12.2 0.4 1.8 2 0 0 2 2 2 0 Membrane MotB of proton-channel complex MotA/MotB Bac_GH3_C PF18034.1 NODE_31262_length_696_cov_88.226929_g24760_i0forward_frame_3 - 0.15 11.8 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 Bacterial Glycosyl hydrolase family 3 C-terminal domain SKA2 PF16740.5 ORF98989 - 4.1e-05 23.3 7.0 5.9e-05 22.8 5.8 1.7 1 1 1 2 2 2 1 Spindle and kinetochore-associated protein 2 TMF_TATA_bd PF12325.8 ORF98989 - 0.0011 19.2 12.7 0.0015 18.7 12.7 1.1 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding GOLGA2L5 PF15070.6 ORF98989 - 0.023 13.4 4.4 0.033 12.9 4.4 1.2 1 0 0 1 1 1 0 Putative golgin subfamily A member 2-like protein 5 HAUS-augmin3 PF14932.6 ORF98989 - 0.13 11.8 5.8 0.2 11.2 5.8 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 KASH_CCD PF14662.6 ORF98989 - 0.13 12.0 12.7 0.26 11.1 12.7 1.3 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH bZIP_2 PF07716.15 ORF98989 - 0.15 12.2 0.7 0.15 12.2 0.7 2.3 2 0 0 2 2 2 0 Basic region leucine zipper YabA PF06156.13 ORF98989 - 0.16 12.6 7.9 0.21 12.2 1.3 2.1 1 1 1 2 2 2 0 Initiation control protein YabA UPF0242 PF06785.11 ORF98989 - 0.18 11.9 8.2 0.26 11.4 8.2 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ZapB PF06005.12 ORF98989 - 0.21 12.1 11.5 0.085 13.3 7.0 2.1 1 1 1 2 2 2 0 Cell division protein ZapB TSC22 PF01166.18 ORF98989 - 0.27 11.6 7.6 1.3 9.3 3.7 3.0 2 1 1 3 3 3 0 TSC-22/dip/bun family SHE3 PF17078.5 ORF98989 - 0.76 9.5 6.0 1.6 8.4 6.0 1.4 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 ADIP PF11559.8 ORF98989 - 1.3 9.1 11.9 0.17 12.0 4.4 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding HALZ PF02183.18 ORF98989 - 1.3 9.3 6.3 8.5 6.7 0.2 2.4 2 0 0 2 2 2 0 Homeobox associated leucine zipper bZIP_1 PF00170.21 ORF98989 - 2.8 8.1 9.2 1.1 9.4 3.4 2.5 2 1 0 2 2 2 0 bZIP transcription factor HIP1_clath_bdg PF16515.5 ORF98989 - 7.8 7.2 12.3 1.5 9.5 2.4 2.4 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 EptA_B_N PF08019.12 ORF96289 - 0.011 15.6 1.7 0.011 15.6 1.7 1.7 1 1 0 1 1 1 0 Phosphoethanolamine transferase EptA/EptB DUF962 PF06127.11 ORF96289 - 2.5 8.2 6.8 0.22 11.6 1.2 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF962) PseudoU_synth_2 PF00849.22 ORF92671 - 4.5e-18 65.8 0.0 7e-18 65.2 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 ORF92671 - 1.3e-09 37.6 0.1 2.5e-09 36.7 0.1 1.5 1 0 0 1 1 1 1 S4 domain MAT1 PF06391.13 ORF91406 - 9.5e-15 55.0 0.4 1.2e-14 54.6 0.4 1.1 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 Vir_act_alpha_C PF10400.9 ORF91406 - 0.018 15.7 0.6 0.018 15.7 0.6 1.6 2 0 0 2 2 2 0 Virulence activator alpha C-term MORN PF02493.20 ORF91249 - 1.2e-07 31.2 14.2 6.4e-05 22.6 0.2 4.7 5 0 0 5 5 5 3 MORN repeat Ax_dynein_light PF10211.9 ORF86195 - 1.8e-75 253.0 8.0 2.1e-75 252.8 8.0 1.0 1 0 0 1 1 1 1 Axonemal dynein light chain Lipoprotein_7 PF01540.16 ORF86195 - 0.0024 17.2 1.8 0.0029 16.9 1.8 1.1 1 0 0 1 1 1 1 Adhesin lipoprotein HBM PF16591.5 ORF86195 - 0.0028 17.1 0.8 0.005 16.3 0.5 1.5 1 1 0 1 1 1 1 Helical bimodular sensor domain ApoLp-III PF07464.11 ORF86195 - 0.019 15.0 2.6 0.035 14.2 2.6 1.4 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) CREPT PF16566.5 ORF86195 - 0.059 13.5 7.9 0.29 11.3 0.7 2.3 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour AKNA PF12443.8 ORF86195 - 0.062 14.0 0.7 0.16 12.6 0.3 1.8 1 1 0 1 1 1 0 AT-hook-containing transcription factor FapA PF03961.13 ORF86195 - 0.16 10.6 2.9 0.21 10.2 2.9 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A KLRAQ PF10205.9 ORF86195 - 0.38 11.0 6.3 0.5 10.6 4.1 1.9 2 0 0 2 2 2 0 Predicted coiled-coil domain-containing protein COG2 PF06148.11 ORF86195 - 0.75 9.9 5.4 19 5.4 0.2 2.9 2 1 1 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4472 PF14739.6 ORF86195 - 2.2 9.0 9.9 0.48 11.2 6.6 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4472) Exonuc_VII_L PF02601.15 ORF86195 - 2.9 7.4 6.7 6.3 6.3 6.5 1.8 2 1 0 2 2 2 0 Exonuclease VII, large subunit Aminotran_1_2 PF00155.21 ORF83110 - 0.00057 19.2 0.0 0.0007 18.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Caldesmon PF02029.15 ORF79492 - 3.5 6.3 47.7 4.4 6.0 47.7 1.2 1 0 0 1 1 1 0 Caldesmon Methyltransf_25 PF13649.6 ORF77743 - 8.6e-10 39.2 0.0 2e-09 38.0 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF77743 - 4.2e-09 36.4 0.2 9.9e-09 35.2 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF77743 - 2.9e-07 30.5 0.0 4.4e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF77743 - 2.8e-06 27.9 0.0 5.1e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF77743 - 1e-05 26.2 0.0 1.9e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF77743 - 0.0001 21.7 0.0 0.00013 21.4 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 ORF77743 - 0.00055 19.5 0.0 0.00094 18.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_9 PF08003.11 ORF77743 - 0.0025 16.8 0.0 0.0047 15.9 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_32 PF13679.6 ORF77743 - 0.0026 17.8 0.0 0.0052 16.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF77743 - 0.022 14.4 0.0 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW pRN1_helical PF13010.6 ORF77743 - 0.055 13.4 0.1 0.14 12.2 0.1 1.6 1 0 0 1 1 1 0 Primase helical domain PrmA PF06325.13 ORF77743 - 0.064 12.6 0.0 0.087 12.2 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.12 ORF77743 - 0.14 11.2 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase AdoMet_MTase PF07757.13 ORF77743 - 0.16 12.3 0.2 0.45 10.9 0.0 1.8 2 0 0 2 2 2 0 Predicted AdoMet-dependent methyltransferase RyR PF02026.16 ORF76516 - 0.08 13.1 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 RyR domain Amidohydro_2 PF04909.14 ORF74445 - 0.036 13.8 0.3 0.053 13.3 0.3 1.2 1 0 0 1 1 1 0 Amidohydrolase Transglycosylas PF06737.14 ORF7379 - 0.074 13.7 0.1 0.43 11.3 0.0 2.1 2 0 0 2 2 2 0 Transglycosylase-like domain DUF2072 PF09845.9 ORF72376 - 1.7 8.9 10.3 1.7 8.9 2.8 2.2 2 0 0 2 2 2 0 Zn-ribbon containing protein RPA43_OB PF17875.1 ORF72376 - 6.9 7.3 10.1 4.1 8.0 2.1 2.2 2 0 0 2 2 2 0 RPA43 OB domain in RNA Pol I KIAA1430 PF13879.6 ORF71885 - 4e-13 50.0 8.5 4e-13 50.0 8.5 2.8 2 1 0 2 2 2 1 KIAA1430 homologue DUF1324 PF07038.11 ORF7036 - 0.0058 16.8 0.0 0.013 15.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1324) SnoaL_2 PF12680.7 ORF66734 - 0.00019 22.0 0.2 0.0012 19.4 0.1 2.3 1 1 1 3 3 3 1 SnoaL-like domain DUF4440 PF14534.6 ORF66734 - 0.00022 21.6 0.1 0.00062 20.1 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4440) SnoaL_3 PF13474.6 ORF66734 - 0.0011 19.3 0.0 0.028 14.7 0.0 2.4 2 0 0 2 2 2 1 SnoaL-like domain GBP_PSP PF02425.15 ORF66734 - 0.01 15.5 3.2 2.7 7.7 0.2 2.7 2 0 0 2 2 2 0 Paralytic/GBP/PSP peptide CaMKII_AD PF08332.10 ORF66734 - 0.011 15.8 0.0 0.55 10.4 0.0 2.3 2 0 0 2 2 2 0 Calcium/calmodulin dependent protein kinase II association domain Integrase_Zn PF02022.19 ORF6159 - 0.023 14.7 1.8 0.083 12.9 0.8 2.2 2 0 0 2 2 2 0 Integrase Zinc binding domain TaqI_C PF12950.7 ORF6159 - 0.039 14.0 2.2 0.059 13.4 2.2 1.4 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain peroxidase PF00141.23 ORF53086 - 1.9e-39 135.7 0.0 3.2e-39 135.0 0.0 1.3 1 1 0 1 1 1 1 Peroxidase DUF4866 PF16160.5 ORF53086 - 0.041 13.2 0.0 0.056 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4866) Aldolase_II PF00596.21 ORF51080 - 1.8e-46 158.4 1.1 2.2e-46 158.2 1.1 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Glyco_transf_4 PF13439.6 ORF51080 - 0.066 13.2 0.4 1.7 8.6 0.0 2.3 2 0 0 2 2 2 0 Glycosyltransferase Family 4 DHHC PF01529.20 ORF48607 - 3.6e-20 72.4 8.0 3.6e-20 72.4 8.0 2.2 2 0 0 2 2 2 1 DHHC palmitoyltransferase ABC2_membrane_3 PF12698.7 ORF48607 - 0.0037 16.4 0.0 0.0076 15.4 0.0 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein PrgI PF12666.7 ORF48607 - 0.055 14.2 1.8 0.31 11.8 0.1 2.2 2 0 0 2 2 2 0 PrgI family protein Prenyltransf PF01255.19 ORF47870 - 3.1e-68 229.7 0.0 3.5e-68 229.5 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase CBP_BcsQ PF06564.12 ORF38791 - 1.5e-92 309.3 3.9 1.7e-92 309.1 3.9 1.0 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ PH_12 PF16457.5 ORF3763 - 0.94 10.0 7.0 0.31 11.6 2.6 2.2 2 0 0 2 2 2 0 Pleckstrin homology domain DUF3097 PF11296.8 ORF36690 - 0.066 12.4 0.0 0.092 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3097) AlphaC_C PF17480.2 ORF36690 - 0.11 12.5 0.0 0.44 10.6 0.0 1.9 2 0 0 2 2 2 0 AlphaC C-terminal AAA_lid_8 PF17868.1 ORF36467 - 8.8e-08 31.9 0.0 1.6e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 AAA lid domain XhlA PF10779.9 ORF35057 - 0.075 13.2 1.8 0.3 11.3 1.9 1.9 2 0 0 2 2 2 0 Haemolysin XhlA AMP-binding_C PF13193.6 ORF32262 - 3.4e-27 95.2 0.1 5e-27 94.7 0.1 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF32262 - 8.2e-16 57.6 0.0 1.3e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme UBA PF00627.31 ORF30888 - 0.0023 17.8 0.1 0.006 16.5 0.1 1.8 1 0 0 1 1 1 1 UBA/TS-N domain OKR_DC_1_C PF03711.15 ORF30888 - 0.035 14.4 1.1 0.072 13.4 1.1 1.5 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, C-terminal domain UIM PF02809.20 ORF30888 - 0.065 13.2 0.7 0.065 13.2 0.7 4.0 3 0 0 3 3 3 0 Ubiquitin interaction motif AAA_lid_1 PF17857.1 ORF30888 - 0.15 12.3 1.6 0.29 11.4 1.6 1.6 1 0 0 1 1 1 0 AAA+ lid domain DUF2151 PF10221.9 ORF30888 - 0.28 9.7 8.7 0.33 9.5 8.7 1.0 1 0 0 1 1 1 0 Cell cycle and development regulator DUF2175 PF09943.9 ORF30888 - 1.8 8.9 6.0 0.89 9.9 3.4 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) C2 PF00168.30 ORF30336 - 4.2e-09 36.6 0.0 6.7e-09 36.0 0.0 1.3 1 0 0 1 1 1 1 C2 domain HpcH_HpaI PF03328.14 ORF29135 - 4.9e-42 143.5 0.0 5.5e-42 143.4 0.0 1.0 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family RHH_8 PF17723.1 ORF29135 - 0.084 13.1 0.0 0.22 11.7 0.0 1.5 1 1 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family DUF1455 PF07306.11 ORF25569 - 0.076 13.0 8.1 4.6 7.2 4.6 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1455) PSII_Pbs31 PF18240.1 ORF23134 - 0.21 12.1 0.2 0.21 12.1 0.2 2.9 2 2 1 3 3 3 0 Photosystem II Psb31 protein 3HCDH_N PF02737.18 ORF22850 - 8.2e-25 87.7 0.0 1.1e-24 87.3 0.0 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 ORF22850 - 5.4e-14 52.6 0.0 9.8e-14 51.7 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Smr PF01713.21 ORF17385 - 1.6e-08 34.8 0.5 3.2e-08 33.8 0.5 1.5 1 0 0 1 1 1 1 Smr domain PPR PF01535.20 ORF17385 - 9.4e-08 31.8 0.1 0.011 16.0 0.1 3.5 3 0 0 3 3 3 2 PPR repeat PPR_2 PF13041.6 ORF17385 - 4.6e-06 26.7 0.0 0.00052 20.2 0.0 2.9 1 1 2 3 3 3 1 PPR repeat family PPR_3 PF13812.6 ORF17385 - 0.00011 22.1 0.0 0.21 11.7 0.0 3.1 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_1 PF12854.7 ORF17385 - 0.0043 16.7 0.0 2.8 7.7 0.0 2.7 3 0 0 3 3 3 2 PPR repeat Ras PF00071.22 ORF151481 - 2.5e-53 180.0 1.4 3.1e-53 179.7 1.4 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF151481 - 5.7e-33 113.7 0.2 9.9e-33 112.9 0.2 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF151481 - 1.7e-10 40.6 0.6 2.2e-10 40.3 0.6 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF151481 - 2.6e-06 27.5 0.0 3.8e-06 27.0 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 ORF151481 - 0.00084 19.1 0.3 0.69 9.6 0.0 2.3 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 ORF151481 - 0.0031 17.4 0.2 0.24 11.3 0.0 2.5 1 1 2 3 3 3 1 RsgA GTPase Gtr1_RagA PF04670.12 ORF151481 - 0.0091 15.4 0.3 0.015 14.7 0.2 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region Baculo_p47 PF05112.12 ORF151481 - 0.017 14.7 0.8 0.022 14.4 0.8 1.1 1 0 0 1 1 1 0 Baculovirus P47 protein FeoB_N PF02421.18 ORF151481 - 0.028 13.9 0.0 2.7 7.5 0.0 2.2 2 0 0 2 2 2 0 Ferrous iron transport protein B MORN PF02493.20 ORF147394 - 6.2e-50 164.2 66.8 1.8e-08 33.8 1.9 9.9 10 0 0 10 10 10 9 MORN repeat DEADboxA PF12343.8 ORF147394 - 6.7 7.3 13.1 1.5 9.4 2.9 3.7 1 1 1 2 2 2 0 Cold shock protein DEAD box A DUF523 PF04463.12 ORF147394 - 8.7 6.4 5.8 41 4.2 0.0 3.9 3 2 1 4 4 4 0 Protein of unknown function (DUF523) AMP-binding_C PF13193.6 ORF1427 - 3.4e-27 95.2 0.1 5e-27 94.7 0.1 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 ORF1427 - 8.2e-16 57.6 0.0 1.3e-15 57.0 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme Arf PF00025.21 ORF142309 - 2.3e-75 251.9 0.1 2.7e-75 251.6 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 ORF142309 - 4.6e-14 52.7 0.0 6.5e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 ORF142309 - 7.7e-13 48.4 0.0 9.6e-13 48.0 0.0 1.1 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 ORF142309 - 8.5e-13 48.1 0.0 1.1e-12 47.8 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 ORF142309 - 4e-10 39.4 0.3 1.8e-07 30.7 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Gtr1_RagA PF04670.12 ORF142309 - 6.8e-10 38.7 0.0 8.8e-10 38.3 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF142309 - 2.7e-05 24.2 0.0 4.4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_33 PF13671.6 ORF142309 - 0.026 14.7 0.0 0.059 13.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain 6PF2K PF01591.18 ORF142309 - 0.075 12.3 0.1 0.12 11.6 0.1 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Synaptobrevin PF00957.21 ORF141498 - 1.8e-17 62.9 4.9 3.2e-17 62.1 4.9 1.4 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 ORF141498 - 0.00029 20.8 0.0 0.00051 20.0 0.0 1.4 1 0 0 1 1 1 1 Regulated-SNARE-like domain RIFIN PF02009.16 ORF141498 - 0.0077 16.2 0.5 0.0088 16.0 0.5 1.2 1 0 0 1 1 1 1 Rifin CD34_antigen PF06365.12 ORF141498 - 0.038 13.6 1.4 0.072 12.7 0.9 1.6 1 1 1 2 2 2 0 CD34/Podocalyxin family Endotoxin_C2 PF18449.1 ORF141498 - 0.071 13.5 2.5 0.8 10.1 0.1 2.4 2 0 0 2 2 2 0 Delta endotoxin Sigma_reg_N PF13800.6 ORF141498 - 0.089 13.1 0.3 0.28 11.5 0.3 1.9 1 0 0 1 1 1 0 Sigma factor regulator N-terminal Fzo_mitofusin PF04799.13 ORF141498 - 0.24 11.0 3.0 0.17 11.4 1.0 1.8 2 0 0 2 2 2 0 fzo-like conserved region Urocanase PF01175.18 ORF141498 - 0.37 10.4 2.3 10 5.7 0.9 2.1 1 1 1 2 2 2 0 Urocanase Rossmann-like domain DUF1635 PF07795.11 ORF137990 - 0.00013 21.9 2.6 0.00021 21.2 2.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1635) GAS PF13851.6 ORF137990 - 0.0074 15.6 6.7 0.0078 15.6 4.6 1.7 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding CENP-K PF11802.8 ORF137990 - 0.013 15.1 1.9 0.022 14.3 1.9 1.3 1 0 0 1 1 1 0 Centromere-associated protein K TMF_TATA_bd PF12325.8 ORF137990 - 0.039 14.2 6.3 0.061 13.6 6.3 1.3 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding APG6_N PF17675.1 ORF137990 - 0.081 13.5 5.8 0.12 12.9 5.8 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Spc7 PF08317.11 ORF137990 - 0.11 11.3 3.7 0.15 11.0 3.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein MscS_porin PF12795.7 ORF137990 - 0.17 11.4 14.5 3.6 7.1 15.2 1.9 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain TMF_DNA_bd PF12329.8 ORF137990 - 0.19 11.7 5.1 0.19 11.7 1.9 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF1690 PF07956.11 ORF137990 - 0.22 12.0 5.3 0.41 11.0 5.3 1.4 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) SlyX PF04102.12 ORF137990 - 0.25 12.0 7.7 0.31 11.7 3.8 2.5 1 1 1 2 2 2 0 SlyX MCC-bdg_PDZ PF10506.9 ORF137990 - 0.29 11.2 8.1 2.2 8.4 1.9 2.3 1 1 1 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome NPV_P10 PF05531.12 ORF137990 - 0.36 11.3 2.2 0.57 10.7 1.2 1.7 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein KfrA_N PF11740.8 ORF137990 - 0.38 11.4 8.5 0.61 10.8 8.5 1.3 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term Phage_GPO PF05929.11 ORF137990 - 0.44 10.1 3.0 0.59 9.7 3.0 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase FapA PF03961.13 ORF137990 - 0.58 8.7 1.2 0.73 8.4 1.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Atg14 PF10186.9 ORF137990 - 0.97 8.5 4.8 1.2 8.1 4.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 OmpH PF03938.14 ORF137990 - 1 9.7 5.4 1.6 9.1 5.4 1.4 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 ORF137990 - 3.7 6.8 7.2 8.8 5.6 1.5 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) FUSC PF04632.12 ORF137990 - 4.4 5.7 6.0 5.4 5.4 6.0 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Peptidase_M17 PF00883.21 ORF135049 - 7.3e-82 275.1 1.5 8.2e-82 275.0 1.5 1.0 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain PDZ PF00595.24 ORF135049 - 0.045 14.1 0.2 0.27 11.6 0.1 2.1 1 1 1 2 2 2 0 PDZ domain PDZ_2 PF13180.6 ORF135049 - 0.073 13.4 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 PDZ domain Ion_trans PF00520.31 ORF134641 - 1.3e-06 27.8 4.9 2.6e-06 26.9 3.5 1.9 2 0 0 2 2 2 1 Ion transport protein DUF4293 PF14126.6 ORF134243 - 0.25 11.6 4.0 0.29 11.4 3.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4293) DPM3 PF08285.11 ORF134243 - 4.5 7.5 6.6 1.6 9.0 1.4 2.6 2 1 1 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DnaJ_CXXCXGXG PF00684.19 ORF133784 - 1e-06 29.0 40.1 0.12 12.8 8.2 4.7 2 2 2 4 4 4 4 DnaJ central domain Paired_CXXCH_1 PF09699.10 ORF133784 - 0.0029 17.3 0.2 0.18 11.6 0.0 4.8 5 1 0 5 5 5 2 Doubled CXXCH motif (Paired_CXXCH_1) Dehyd-heme_bind PF09098.10 ORF133784 - 0.02 14.5 4.8 5 6.7 0.2 3.4 3 0 0 3 3 3 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding DUF3365 PF11845.8 ORF133784 - 0.088 13.1 6.1 16 5.8 0.0 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3365) Ribul_P_3_epim PF00834.19 ORF132051 - 6.2e-61 205.3 0.0 7.6e-61 205.0 0.0 1.1 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family G6PD_C PF02781.16 ORF132051 - 0.15 11.2 0.0 0.22 10.7 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, C-terminal domain Aldedh PF00171.22 ORF129709 - 4.1e-08 32.2 0.3 0.00078 18.1 0.0 2.0 2 0 0 2 2 2 2 Aldehyde dehydrogenase family DUF1487 PF07368.11 ORF129709 - 0.0064 16.0 0.1 0.0094 15.4 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1487) betaPIX_CC PF16523.5 ORF128764 - 0.1 12.4 2.4 0.46 10.3 0.7 2.1 2 0 0 2 2 2 0 betaPIX coiled coil vATP-synt_E PF01991.18 ORF127044 - 4.4e-37 127.4 14.5 5.2e-37 127.2 14.5 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit Fez1 PF06818.15 ORF127044 - 0.012 16.1 12.2 0.032 14.7 7.3 2.1 2 0 0 2 2 2 0 Fez1 MeaB PF03308.16 ORF127044 - 0.067 12.2 1.7 3.4 6.6 0.0 2.3 2 1 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TetR_C_27 PF17935.1 ORF127044 - 0.087 12.9 1.3 0.63 10.1 0.0 2.4 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF5401 PF17380.2 ORF127044 - 10 4.1 21.9 12 3.8 21.9 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Histone PF00125.24 ORF124626 - 0.7 10.3 0.0 0.7 10.3 0.0 3.0 2 1 1 3 3 3 0 Core histone H2A/H2B/H3/H4 GST_N PF02798.20 ORF123120 - 0.0046 17.3 0.0 0.0077 16.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF123120 - 0.062 13.5 0.0 0.56 10.4 0.0 2.1 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain zf-H2C2_2 PF13465.6 ORF121936 - 3.4e-05 24.1 3.0 3.4e-05 24.1 3.0 2.8 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2 PF00096.26 ORF121936 - 5.3e-05 23.4 14.3 0.00012 22.4 2.9 3.1 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-met PF12874.7 ORF121936 - 0.00092 19.5 2.1 0.00092 19.5 2.1 2.2 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 ORF121936 - 0.003 18.2 13.6 0.0099 16.6 2.2 3.0 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 ORF121936 - 0.01 15.8 2.4 0.01 15.8 2.4 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger Helicase_C PF00271.31 ORF121756 - 2e-30 105.4 0.1 5.3e-30 104.0 0.1 1.6 1 1 1 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 ORF121756 - 0.00013 21.8 0.0 0.011 15.5 0.0 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 ORF121756 - 0.0068 15.7 0.0 0.0086 15.3 0.0 1.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase UTP25 PF06862.12 ORF121756 - 0.0085 14.9 0.0 0.02 13.7 0.0 1.5 1 1 0 1 1 1 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 COG5 PF10392.9 ORF121516 - 0.017 15.3 1.3 0.03 14.5 1.3 1.4 1 0 0 1 1 1 0 Golgi transport complex subunit 5 Usher PF00577.20 ORF119424 - 2.3e-30 106.0 0.1 2.7e-30 105.8 0.1 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF119424 - 8.2e-20 70.4 0.3 2.2e-19 69.0 0.1 1.8 2 0 0 2 2 2 1 PapC C-terminal domain Ras PF00071.22 ORF118757 - 1e-39 135.7 1.4 1.3e-39 135.5 1.4 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF118757 - 1.2e-19 70.7 0.3 2e-19 69.9 0.3 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF118757 - 2.9e-14 52.9 0.6 3.7e-14 52.6 0.6 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF118757 - 4.7e-09 36.3 0.4 8.5e-09 35.5 0.4 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF118757 - 1.4e-07 31.1 1.4 1.7e-07 30.8 1.4 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 ORF118757 - 1.2e-06 28.3 4.4 1.4e-05 24.7 4.3 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF118757 - 2.3e-05 23.9 1.0 4e-05 23.2 1.0 1.4 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 ORF118757 - 0.00065 19.6 1.3 0.019 14.9 0.2 2.3 1 1 1 2 2 2 1 RsgA GTPase ABC_tran PF00005.27 ORF118757 - 0.0011 19.5 0.2 0.0019 18.7 0.2 1.5 1 1 0 1 1 1 1 ABC transporter G-alpha PF00503.20 ORF118757 - 0.0049 16.1 0.2 0.0065 15.7 0.2 1.4 1 1 0 1 1 1 1 G-protein alpha subunit TniB PF05621.11 ORF118757 - 0.064 12.7 0.1 0.16 11.3 0.0 1.7 2 0 0 2 2 2 0 Bacterial TniB protein Fer4_6 PF12837.7 ORF116118 - 5.2e-13 48.5 32.2 4.8e-05 23.3 1.4 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_7 PF12838.7 ORF116118 - 5.7e-13 49.2 25.5 2.2e-07 31.3 8.5 3.1 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 ORF116118 - 1.4e-11 44.3 20.2 0.0004 20.4 0.4 3.6 3 1 1 4 4 4 4 4Fe-4S dicluster domain Fer4_9 PF13187.6 ORF116118 - 6e-11 42.3 21.2 5.3e-05 23.3 0.4 3.6 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.27 ORF116118 - 1.1e-10 40.8 35.0 3.2e-06 26.7 1.8 5.2 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_2 PF12797.7 ORF116118 - 1.1e-09 37.8 30.4 0.00083 19.3 1.4 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_21 PF14697.6 ORF116118 - 2.4e-08 34.0 21.9 1.3e-05 25.3 5.8 2.5 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 ORF116118 - 1.2e-07 32.6 27.3 0.0056 17.6 1.1 3.8 2 1 1 3 3 3 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 ORF116118 - 6.1e-07 29.5 34.5 0.0045 17.4 4.5 4.6 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 ORF116118 - 8.5e-07 29.4 24.6 0.00026 21.5 0.3 3.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 ORF116118 - 0.00011 22.8 41.1 0.016 16.1 5.6 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_8 PF13183.6 ORF116118 - 0.0041 17.5 29.6 0.15 12.6 3.8 3.6 1 1 4 5 5 5 4 4Fe-4S dicluster domain UCR_Fe-S_N PF10399.9 ORF116118 - 0.04 13.3 0.8 0.09 12.1 0.8 1.6 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Fer4_22 PF17179.4 ORF116118 - 0.068 14.0 21.8 0.21 12.4 0.4 3.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 ORF116118 - 0.14 12.4 0.2 0.14 12.4 0.2 4.0 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_11 PF13247.6 ORF116118 - 0.18 12.0 11.7 0.12 12.5 2.2 2.7 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 ORF116118 - 0.67 9.7 20.5 14 5.5 1.1 3.2 2 1 1 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XhlA PF10779.9 ORF115882 - 0.016 15.4 0.8 0.3 11.3 1.9 2.2 2 0 0 2 2 2 0 Haemolysin XhlA PARP PF00644.20 ORF11587 - 0.00095 18.8 0.0 0.0015 18.2 0.0 1.2 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain GDPD PF03009.17 ORF113136 - 3.9e-12 46.5 0.9 4.3e-10 39.8 0.4 2.1 2 0 0 2 2 2 2 Glycerophosphoryl diester phosphodiesterase family IQ PF00612.27 ORF110115 - 0.00014 21.4 2.8 0.0024 17.5 0.2 4.6 4 1 1 5 5 5 2 IQ calmodulin-binding motif TsaE PF02367.17 ORF109282 - 6.3e-42 142.5 0.0 8.7e-42 142.1 0.0 1.2 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 ORF109282 - 0.01 16.0 0.0 0.027 14.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF109282 - 0.033 14.6 0.0 0.053 13.9 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_22 PF13401.6 ORF109282 - 0.047 14.0 0.0 0.075 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 ORF109282 - 0.18 12.4 0.1 3.3 8.3 0.0 2.2 2 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF109282 - 0.22 10.8 0.1 0.49 9.7 0.1 1.5 2 0 0 2 2 2 0 Zeta toxin PRK PF00485.18 ORF109282 - 0.23 11.2 0.0 0.31 10.7 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_23 PF13476.6 ORF109282 - 0.31 11.5 0.0 0.43 11.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain Ala_racemase_N PF01168.20 ORF105429 - 5.9e-18 65.3 0.0 9.5e-18 64.6 0.0 1.2 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Tho1_MOS11_C PF18592.1 ORF103914 - 0.0015 18.3 18.1 0.0039 17.0 4.6 4.5 2 1 4 6 6 6 4 Tho1/MOS11 C-terminal domain AIF-MLS PF14962.6 ORF103914 - 1.9 8.4 23.4 0.63 10.0 20.7 1.5 1 1 0 1 1 1 0 Mitochondria Localisation Sequence Dynein_attach_N PF15867.5 ORF103633 - 0.1 12.6 0.5 0.3 11.1 0.5 1.8 1 0 0 1 1 1 0 Dynein attachment factor N-terminus SF-assemblin PF06705.11 ORF103633 - 0.4 10.0 9.1 5.5 6.3 2.1 2.9 2 1 0 2 2 2 0 SF-assemblin/beta giardin betaPIX_CC PF16523.5 ORF103633 - 0.56 10.1 10.4 0.15 11.9 2.6 2.9 2 1 1 3 3 3 0 betaPIX coiled coil Exonuc_VII_L PF02601.15 ORF103633 - 0.63 9.5 12.4 0.31 10.6 5.6 2.0 1 1 1 2 2 2 0 Exonuclease VII, large subunit TraY PF05509.11 ORF103633 - 1.3 9.1 4.9 59 3.8 0.1 4.0 4 0 0 4 4 4 0 TraY domain Vicilin_N PF04702.12 ORF103633 - 1.7 8.5 15.4 0.021 14.7 7.0 2.0 2 1 0 2 2 2 0 Vicilin N terminal region DUF1574 PF07611.11 ORF102833 - 0.073 12.4 2.4 0.078 12.3 1.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1574) TMEM237 PF15383.6 ORF102833 - 1.5 7.8 4.9 2.3 7.2 4.9 1.4 1 0 0 1 1 1 0 Transmembrane protein 237 RyR PF02026.16 ORF100225 - 0.08 13.1 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 RyR domain RHIM PF12721.7 NODE_31636_length_688_cov_2.839204_g25082_i0forward_frame_1 - 0.16 12.5 3.9 0.24 11.9 0.1 2.5 2 0 0 2 2 2 0 RIP homotypic interaction motif E7R PF17467.2 NODE_31630_length_688_cov_7.494640_g25076_i0reverse_frame_1 - 0.048 13.8 1.7 0.74 10.0 0.6 2.7 2 0 0 2 2 2 0 Viral Protein E7 MutS_III PF05192.18 NODE_31630_length_688_cov_7.494640_g25076_i0forward_frame_1 - 8.7e-12 45.7 0.2 1.2e-11 45.2 0.2 1.2 1 0 0 1 1 1 1 MutS domain III IBR PF01485.21 NODE_31605_length_688_cov_158.476263_g25051_i0reverse_frame_1 - 7.6e-06 26.1 3.1 1.5e-05 25.1 3.1 1.4 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain Zn-ribbon_8 PF09723.10 NODE_31605_length_688_cov_158.476263_g25051_i0reverse_frame_1 - 0.0044 17.1 0.9 1.8 8.8 0.0 2.6 2 0 0 2 2 2 2 Zinc ribbon domain zinc-ribbons_6 PF07191.12 NODE_31605_length_688_cov_158.476263_g25051_i0reverse_frame_1 - 0.022 14.7 3.7 0.045 13.7 3.7 1.5 1 0 0 1 1 1 0 zinc-ribbons zf-trcl PF13451.6 NODE_31605_length_688_cov_158.476263_g25051_i0reverse_frame_1 - 0.054 13.4 2.2 0.13 12.1 0.1 2.4 2 0 0 2 2 2 0 Probable zinc-ribbon domain DNA_ligase_ZBD PF03119.16 NODE_31605_length_688_cov_158.476263_g25051_i0reverse_frame_1 - 0.8 9.8 4.8 1.7 8.8 4.8 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain zinc_ribbon_2 PF13240.6 NODE_31605_length_688_cov_158.476263_g25051_i0reverse_frame_1 - 0.98 9.2 6.6 2.8 7.8 1.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 NODE_31605_length_688_cov_158.476263_g25051_i0reverse_frame_1 - 1.1 8.9 4.3 1.8 8.2 4.3 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 NODE_31605_length_688_cov_158.476263_g25051_i0reverse_frame_1 - 1.2 9.1 4.5 3.1 7.8 4.5 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Alanine_zipper PF11839.8 NODE_31605_length_688_cov_158.476263_g25051_i0reverse_frame_1 - 6.7 7.2 37.9 4.6 7.7 12.6 2.6 2 0 0 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein MMPL PF03176.15 NODE_31604_length_688_cov_158.866769_g25050_i0reverse_frame_1 - 0.13 11.1 0.4 0.19 10.6 0.4 1.2 1 0 0 1 1 1 0 MMPL family PMP1_2 PF08114.11 NODE_31600_length_688_cov_224.058193_g25047_i0reverse_frame_1 - 4 7.2 6.4 2.9 7.7 0.2 2.9 3 0 0 3 3 3 0 ATPase proteolipid family Ribosomal_TL5_C PF14693.6 NODE_31577_length_689_cov_2.149847_g25030_i0reverse_frame_1 - 0.011 16.0 0.1 0.026 14.9 0.1 1.5 1 0 0 1 1 1 0 Ribosomal protein TL5, C-terminal domain UPF0158 PF03682.13 NODE_31530_length_690_cov_78.590840_g24991_i0reverse_frame_1 - 0.012 15.6 0.1 0.018 15.0 0.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0158) Abhydrolase_4 PF08386.10 NODE_31517_length_690_cov_161.616794_g24074_i1forward_frame_1 - 0.045 13.9 0.0 0.093 12.9 0.0 1.5 1 0 0 1 1 1 0 TAP-like protein PIF1 PF05970.14 NODE_31495_length_691_cov_2.928354_g24963_i0forward_frame_3 - 7.4e-06 25.4 0.0 1e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 PIF1-like helicase AAA_30 PF13604.6 NODE_31495_length_691_cov_2.928354_g24963_i0forward_frame_3 - 0.031 14.0 0.0 0.042 13.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain Phage_TAC_10 PF10963.8 NODE_31494_length_691_cov_2.957317_g24962_i0reverse_frame_2 - 0.044 14.0 0.1 0.1 12.8 0.1 1.6 1 0 0 1 1 1 0 Phage tail assembly chaperone HRG PF16954.5 NODE_31443_length_692_cov_52.675799_g24917_i0forward_frame_2 - 0.13 12.7 0.3 0.23 11.9 0.3 1.3 1 0 0 1 1 1 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene SWIRM-assoc_2 PF16496.5 NODE_31406_length_693_cov_3.414894_g24885_i0forward_frame_2 - 0.031 13.1 0.4 0.043 12.7 0.4 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal DUF3941 PF13081.6 NODE_31402_length_693_cov_4.123100_g24882_i0reverse_frame_3 - 0.7 10.3 3.5 2.9 8.4 0.8 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3941) CPBP PF02517.16 NODE_31373_length_693_cov_379.948328_g24853_i0forward_frame_3 - 0.0011 19.3 0.3 0.0018 18.6 0.3 1.4 1 0 0 1 1 1 1 CPBP intramembrane metalloprotease YbjQ_1 PF01906.17 ORF99245 - 5.1e-08 33.5 2.8 0.016 15.9 0.0 3.4 3 1 0 3 3 3 2 Putative heavy-metal-binding DUF4156 PF13698.6 ORF99245 - 0.012 15.9 0.1 0.57 10.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4156) MR_MLE_C PF13378.6 ORF94572 - 4.4e-54 183.4 0.0 5e-54 183.2 0.0 1.0 1 0 0 1 1 1 1 Enolase C-terminal domain-like Ion_trans_2 PF07885.16 ORF91631 - 5.9e-12 45.4 4.9 1.4e-11 44.2 4.9 1.6 1 0 0 1 1 1 1 Ion channel DUF347 PF03988.12 ORF91631 - 6.2 7.1 6.8 0.78 10.0 1.6 2.1 2 0 0 2 2 2 0 Repeat of Unknown Function (DUF347) FERM_M PF00373.18 ORF91148 - 9.8e-08 32.4 0.1 6.7e-07 29.7 0.0 1.9 2 0 0 2 2 2 1 FERM central domain zf-C3HC4_2 PF13923.6 ORF90320 - 0.0017 18.2 1.0 0.0017 18.2 1.0 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF90320 - 0.0017 18.6 4.8 0.0017 18.6 4.8 2.8 2 2 0 2 2 2 1 Ring finger domain Zn_ribbon_17 PF17120.5 ORF90320 - 0.0048 16.5 4.4 0.0048 16.5 4.4 2.4 2 1 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-C3H2C3 PF17122.5 ORF90320 - 0.01 15.8 3.3 0.048 13.7 3.3 2.2 1 1 0 1 1 1 0 Zinc-finger Vps39_2 PF10367.9 ORF90320 - 0.024 15.1 1.7 0.31 11.5 0.2 2.4 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 zf-RING_5 PF14634.6 ORF90320 - 0.028 14.4 7.9 0.028 14.4 7.9 2.7 2 2 0 2 2 2 0 zinc-RING finger domain zf-RING_11 PF17123.5 ORF90320 - 0.037 13.8 3.4 0.085 12.6 3.4 1.7 1 0 0 1 1 1 0 RING-like zinc finger FYVE PF01363.21 ORF90320 - 0.21 11.7 16.6 0.096 12.8 1.0 2.5 2 1 0 2 2 2 0 FYVE zinc finger zf-C3HC4_3 PF13920.6 ORF90320 - 1.1 9.2 16.3 1.5 8.7 2.8 2.5 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) C1_2 PF03107.16 ORF90320 - 2.3 8.6 25.3 0.12 12.7 2.4 3.3 3 0 0 3 3 3 0 C1 domain ERGIC_N PF13850.6 ORF89805 - 0.043 14.2 0.3 0.083 13.2 0.3 1.5 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) IBR PF01485.21 ORF89225 - 1.9e-12 47.2 24.5 5.1e-06 26.6 11.2 2.5 2 1 0 2 2 2 2 IBR domain, a half RING-finger domain C1_4 PF07975.12 ORF89225 - 0.14 12.4 0.6 0.14 12.4 0.6 3.4 3 1 1 4 4 4 0 TFIIH C1-like domain SDH_C PF18317.1 ORF86845 - 7.8e-12 44.7 0.9 1.6e-11 43.7 0.9 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_dh_N PF08501.11 ORF86845 - 3.4e-05 24.0 0.1 8.4e-05 22.8 0.1 1.7 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 ORF86845 - 0.003 17.6 0.1 0.0045 17.1 0.1 1.2 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Methyltransf_16 PF10294.9 ORF86845 - 0.07 12.9 0.1 0.11 12.2 0.1 1.3 1 0 0 1 1 1 0 Lysine methyltransferase RE_Bsp6I PF09504.10 ORF86845 - 0.14 11.7 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Bsp6I restriction endonuclease Abhydrolase_2 PF02230.16 ORF86180 - 1.7e-29 103.2 0.0 2.3e-29 102.8 0.0 1.0 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 ORF86180 - 0.00035 19.9 0.6 0.44 9.8 0.0 2.5 2 1 1 3 3 3 2 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 ORF86180 - 0.00082 19.3 0.3 0.095 12.5 0.1 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold Esterase PF00756.20 ORF86180 - 0.0016 18.1 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 ORF86180 - 0.005 16.3 0.6 0.17 11.3 0.0 2.2 2 0 0 2 2 2 1 Prolyl oligopeptidase family DLH PF01738.18 ORF86180 - 0.0079 15.8 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family FSH1 PF03959.13 ORF86180 - 0.016 14.9 0.0 0.027 14.1 0.0 1.5 1 1 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_1 PF00561.20 ORF86180 - 0.036 13.7 0.0 0.068 12.8 0.0 1.7 2 0 0 2 2 2 0 alpha/beta hydrolase fold RCC1_2 PF13540.6 ORF85300 - 0.029 14.2 0.2 0.065 13.1 0.2 1.7 1 0 0 1 1 1 0 Regulator of chromosome condensation (RCC1) repeat IF4E PF01652.18 ORF8478 - 1.3e-28 99.9 1.1 1.8e-28 99.3 1.1 1.2 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E HxlR PF01638.17 ORF80537 - 0.12 12.3 0.4 1.4 8.8 0.4 2.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix PBP PF01161.20 ORF80149 - 0.0021 18.4 0.0 0.0036 17.6 0.0 1.4 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Tyr-DNA_phospho PF06087.12 ORF78300 - 0.0094 14.9 0.8 0.015 14.2 0.8 1.3 1 0 0 1 1 1 1 Tyrosyl-DNA phosphodiesterase DUF4407 PF14362.6 ORF78300 - 0.77 9.0 6.2 1.1 8.6 6.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) AATF-Che1 PF13339.6 ORF78300 - 6.9 7.3 10.6 20 5.9 8.7 2.4 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor CemA PF03040.14 ORF78300 - 9.9 6.0 7.5 1.3 8.9 3.0 1.8 1 1 1 2 2 2 0 CemA family EF1_GNE PF00736.19 ORF7801 - 3.3e-28 97.7 0.8 6.3e-28 96.8 0.8 1.5 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain Med5 PF08689.10 ORF7801 - 0.0047 14.8 0.1 0.0051 14.7 0.1 1.1 1 0 0 1 1 1 1 Mediator complex subunit Med5 PBP1_TM PF14812.6 ORF7801 - 0.026 14.9 5.0 0.18 12.2 6.2 1.7 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal GST_C_6 PF17171.4 ORF7801 - 0.038 13.8 0.0 0.086 12.7 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Comm PF15957.5 ORF77444 - 0.13 12.7 1.1 0.21 12.0 1.1 1.3 1 0 0 1 1 1 0 Commissureless DUF2282 PF10048.9 ORF76723 - 0.098 12.7 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2282) RNA_ligase PF09414.10 ORF76509 - 5.1e-14 52.9 0.1 8.5e-14 52.2 0.1 1.3 1 0 0 1 1 1 1 RNA ligase PQ-loop PF04193.14 ORF73695 - 9.3e-26 89.4 9.2 1.1e-12 47.5 3.2 2.7 3 0 0 3 3 3 2 PQ loop repeat ER_lumen_recept PF00810.18 ORF73695 - 0.0098 16.7 4.5 0.057 14.2 1.0 2.7 1 1 2 3 3 3 1 ER lumen protein retaining receptor TMEM107 PF14995.6 ORF73695 - 0.043 14.3 3.6 1.4 9.4 0.9 2.4 2 1 0 2 2 2 0 Transmembrane protein MtN3_slv PF03083.16 ORF73695 - 0.29 11.2 7.5 3.5 7.7 0.2 2.6 2 1 0 2 2 2 0 Sugar efflux transporter for intercellular exchange Wzy_C PF04932.15 ORF73695 - 1.4 8.5 6.4 1.1 8.9 4.3 2.1 1 1 1 2 2 2 0 O-Antigen ligase DUF4462 PF14692.6 ORF70089 - 0.43 10.1 4.9 1.1 8.9 4.9 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4462) NKWYS PF10364.9 ORF69332 - 0.1 12.7 0.1 0.16 12.1 0.1 1.3 1 0 0 1 1 1 0 Putative capsular polysaccharide synthesis protein Na_H_antiporter PF03553.14 ORF62601 - 0.043 13.0 1.3 0.046 12.9 0.3 1.6 2 0 0 2 2 2 0 Na+/H+ antiporter family Pro_isomerase PF00160.21 ORF5958 - 8.3e-33 113.9 0.1 1.1e-32 113.6 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EF-hand_6 PF13405.6 ORF58984 - 1.4e-06 27.7 0.3 4.8e-05 23.0 0.1 2.5 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 ORF58984 - 4.1e-06 25.9 0.3 1.2e-05 24.5 0.3 1.8 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF58984 - 0.0006 20.2 0.1 0.0011 19.3 0.1 1.5 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 ORF58984 - 0.0092 15.8 1.3 0.035 14.0 0.4 2.2 1 1 1 2 2 2 1 EF-hand domain pair DUF3267 PF11667.8 ORF58984 - 0.037 14.3 0.8 0.074 13.3 0.8 1.5 1 0 0 1 1 1 0 Putative zincin peptidase TMEM107 PF14995.6 ORF58984 - 0.042 14.3 0.8 0.065 13.7 0.8 1.3 1 0 0 1 1 1 0 Transmembrane protein SASP_gamma PF04259.14 ORF58984 - 0.063 13.8 0.1 0.1 13.1 0.1 1.3 1 0 0 1 1 1 0 Small, acid-soluble spore protein, gamma-type EF-hand_5 PF13202.6 ORF58984 - 0.071 12.6 0.1 0.16 11.5 0.1 1.6 1 0 0 1 1 1 0 EF hand Fer4_24 PF18109.1 ORF50103 - 0.7 10.2 1.7 46 4.4 0.0 2.8 3 0 0 3 3 3 0 Ferredoxin I 4Fe-4S cluster domain HAD_2 PF13419.6 ORF49518 - 7.1e-29 101.1 0.0 8.3e-29 100.9 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 ORF49518 - 1.3e-17 64.8 0.1 6e-17 62.6 0.1 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 ORF49518 - 2.5e-05 24.8 0.1 5.3e-05 23.7 0.2 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 ORF49518 - 7.3e-05 22.8 0.1 0.00021 21.3 0.0 1.7 2 0 0 2 2 2 1 HAD-hyrolase-like START PF01852.19 ORF47737 - 2.6e-12 46.6 0.1 3.2e-12 46.3 0.1 1.0 1 0 0 1 1 1 1 START domain RPM2 PF08579.11 ORF47737 - 0.045 14.1 0.6 0.073 13.5 0.6 1.3 1 0 0 1 1 1 0 Mitochondrial ribonuclease P subunit (RPM2) Tyrosinase PF00264.20 ORF46586 - 0.16 12.2 4.4 1.1 9.5 4.4 2.0 1 1 0 1 1 1 0 Common central domain of tyrosinase TPR_12 PF13424.6 ORF43160 - 2.9e-19 69.1 12.1 6.1e-10 39.3 2.9 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 ORF43160 - 2.6e-17 62.1 17.6 5.5e-07 29.3 0.4 5.9 4 1 3 7 7 7 3 Tetratricopeptide repeat TPR_2 PF07719.17 ORF43160 - 0.0002 21.2 7.7 0.086 13.0 0.0 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 ORF43160 - 0.00022 21.7 19.5 0.002 18.6 6.0 3.9 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 ORF43160 - 0.00038 20.4 0.2 0.044 14.0 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF43160 - 0.00053 19.7 0.9 0.056 13.3 0.0 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 ORF43160 - 0.00085 19.2 7.0 0.0029 17.5 0.0 4.0 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_16 PF13432.6 ORF43160 - 0.0035 17.9 9.7 0.22 12.2 0.3 3.5 2 1 0 2 2 2 1 Tetratricopeptide repeat Coatomer_E PF04733.14 ORF43160 - 0.0045 16.4 4.4 0.029 13.8 0.1 2.8 2 1 0 2 2 2 1 Coatomer epsilon subunit TPR_14 PF13428.6 ORF43160 - 0.0067 17.1 0.1 0.0067 17.1 0.1 4.6 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_4 PF07721.14 ORF43160 - 0.011 16.3 17.9 0.073 13.7 0.6 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat HEPN_RnaseLS PF18869.1 ORF43160 - 0.15 12.2 0.1 0.28 11.3 0.1 1.5 1 0 0 1 1 1 0 RnaseLS-like HEPN YfdX PF10938.8 ORF43160 - 0.58 10.1 8.3 9.1 6.2 0.0 4.2 3 2 1 4 4 4 0 YfdX protein TPR_6 PF13174.6 ORF43160 - 2.3 9.0 7.2 77 4.3 0.1 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat VEGF_C PF14554.6 ORF39388 - 0.0068 16.5 3.2 0.024 14.7 3.2 1.9 1 0 0 1 1 1 1 VEGF heparin-binding domain FAM193_C PF15914.5 ORF3857 - 0.17 11.6 3.8 0.21 11.3 1.3 2.2 2 0 0 2 2 2 0 FAM193 family C-terminal Inhibitor_I24 PF10465.9 ORF37546 - 0.19 11.7 0.0 0.33 10.9 0.0 1.3 1 0 0 1 1 1 0 PinA peptidase inhibitor Arf PF00025.21 ORF32623 - 7.2e-61 204.7 0.3 8.4e-61 204.4 0.3 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF32623 - 1.5e-15 57.1 0.0 1.9e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 ORF32623 - 4.7e-15 55.8 0.1 6.8e-15 55.3 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 ORF32623 - 6.1e-12 45.4 0.3 6.9e-09 35.3 0.2 2.1 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 ORF32623 - 1.1e-11 44.6 0.0 1.3e-11 44.4 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 ORF32623 - 4e-11 42.7 0.2 4.8e-11 42.4 0.2 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF32623 - 4.3e-08 33.2 0.1 7e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 ORF32623 - 0.0015 18.1 0.2 0.046 13.3 0.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 ORF32623 - 0.0026 17.3 2.3 0.0085 15.6 2.3 1.8 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_33 PF13671.6 ORF32623 - 0.01 16.0 0.0 0.014 15.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 ORF32623 - 0.016 15.7 0.0 0.022 15.3 0.0 1.2 1 0 0 1 1 1 0 ABC transporter AAA_21 PF13304.6 ORF32623 - 0.016 15.0 0.0 0.02 14.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 ORF32623 - 0.03 14.0 0.0 0.033 13.9 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain MobB PF03205.14 ORF32623 - 0.039 13.9 0.0 0.058 13.3 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B TrkA_N PF02254.18 ORF32623 - 0.12 12.6 0.1 0.3 11.4 0.1 1.6 1 1 0 1 1 1 0 TrkA-N domain AAA_23 PF13476.6 ORF32623 - 0.16 12.4 0.3 0.37 11.3 0.3 1.3 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 ORF32623 - 0.17 11.5 1.0 5.8 6.5 0.1 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Pkinase PF00069.25 ORF32360 - 5e-48 163.8 0.0 5.7e-48 163.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF32360 - 1.8e-21 76.6 0.0 7.6e-21 74.6 0.0 1.8 1 1 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF32360 - 4.2e-05 23.0 0.4 6.1e-05 22.5 0.4 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 ORF32360 - 0.0035 16.7 0.0 0.009 15.4 0.0 1.7 2 1 0 2 2 2 1 Kinase-like YukC PF10140.9 ORF32360 - 0.0091 14.9 0.0 0.012 14.5 0.0 1.1 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukC Pkinase_fungal PF17667.1 ORF32360 - 0.016 14.0 0.0 0.017 13.9 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Haspin_kinase PF12330.8 ORF32360 - 0.025 13.5 0.1 0.048 12.6 0.1 1.5 1 0 0 1 1 1 0 Haspin like kinase domain PABP PF00658.18 ORF32360 - 0.14 12.4 0.0 0.3 11.3 0.0 1.5 1 0 0 1 1 1 0 Poly-adenylate binding protein, unique domain APH PF01636.23 ORF32360 - 0.18 11.7 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF4132 PF13569.6 ORF30022 - 4.6e-33 114.5 0.0 5.7e-33 114.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4132) Arrestin_C PF02752.22 ORF29984 - 3.6e-10 40.4 3.5 6.2e-10 39.7 3.5 1.4 1 0 0 1 1 1 1 Arrestin (or S-antigen), C-terminal domain Spo0M PF07070.11 ORF29984 - 0.0001 21.9 0.1 0.00016 21.3 0.1 1.2 1 0 0 1 1 1 1 SpoOM protein Jag_N PF14804.6 ORF29984 - 0.0017 18.6 0.6 0.0036 17.6 0.6 1.6 1 0 0 1 1 1 1 Jag N-terminus PEPCK_ATP PF01293.20 ORF29984 - 0.018 13.7 0.1 0.022 13.5 0.1 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase DUF2458 PF10454.9 ORF29984 - 0.088 12.5 0.3 0.14 11.8 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2458) HxlR PF01638.17 ORF2945 - 0.12 12.3 0.4 1.4 8.8 0.4 2.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks95.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks95.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks95.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks95.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:31:40 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Ion_trans PF00520.31 ORF25262 - 9e-09 34.9 4.8 1.2e-08 34.6 4.8 1.1 1 0 0 1 1 1 1 Ion transport protein HR1 PF02185.16 ORF25262 - 0.0041 17.2 1.5 0.23 11.6 0.5 2.2 2 0 0 2 2 2 2 Hr1 repeat PKD_channel PF08016.12 ORF25262 - 0.16 10.7 4.2 0.19 10.4 4.2 1.1 1 0 0 1 1 1 0 Polycystin cation channel Sec5 PF15469.6 ORF25262 - 0.65 9.8 5.4 6.5 6.5 5.4 2.2 1 1 0 1 1 1 0 Exocyst complex component Sec5 RRM_1 PF00076.22 ORF23190 - 1.7e-07 30.9 0.0 2.7e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 ORF23190 - 0.0021 18.0 0.0 0.0021 18.0 0.0 1.9 2 0 0 2 2 2 1 RNA binding motif RSB_motif PF16294.5 ORF23190 - 0.96 9.7 25.2 1.8 8.8 25.2 1.5 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif Presenilin PF01080.17 ORF23190 - 2.5 6.8 6.0 3.1 6.5 6.0 1.1 1 0 0 1 1 1 0 Presenilin SAPS PF04499.15 ORF23190 - 9.6 4.9 5.8 12 4.5 5.8 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Ependymin PF00811.18 ORF20135 - 0.027 14.7 0.1 0.05 13.9 0.1 1.4 1 0 0 1 1 1 0 Ependymin NLE PF08154.12 ORF20135 - 0.15 12.6 0.1 7.1 7.2 0.0 2.3 2 0 0 2 2 2 0 NLE (NUC135) domain FUSC-like PF12805.7 ORF18849 - 0.36 9.9 2.9 0.78 8.8 2.9 1.5 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS NUDIX_2 PF13869.6 ORF17878 - 0.0015 18.1 0.1 0.0025 17.4 0.1 1.4 1 1 0 1 1 1 1 Nucleotide hydrolase TMEM144 PF07857.12 ORF17878 - 0.02 13.9 0.2 0.12 11.4 0.0 1.9 2 0 0 2 2 2 0 Transmembrane family, TMEM144 of transporters CSD PF00313.22 ORF17862 - 3e-12 46.2 0.0 2.3e-11 43.4 0.0 2.0 2 0 0 2 2 2 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 ORF17862 - 0.081 12.6 0.2 0.15 11.7 0.2 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain v110 PF01639.17 ORF15675 - 0.53 10.2 3.6 0.13 12.2 0.5 1.6 2 0 0 2 2 2 0 Viral family 110 Pkinase PF00069.25 ORF152446 - 0.00018 21.0 0.1 0.00018 21.0 0.1 1.7 2 0 0 2 2 2 1 Protein kinase domain YihI PF04220.12 ORF152446 - 0.0073 16.0 0.5 0.0073 16.0 0.5 1.9 1 1 1 2 2 2 1 Der GTPase activator (YihI) DUF4680 PF15730.5 ORF152446 - 0.059 13.7 1.1 0.083 13.2 0.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4680) Amb_V_allergen PF03913.13 ORF149977 - 1.2 9.2 5.4 3.9 7.5 5.4 1.9 1 1 0 1 1 1 0 Amb V Allergen FAM193_C PF15914.5 ORF14895 - 0.17 11.6 3.8 0.21 11.3 1.3 2.2 2 0 0 2 2 2 0 FAM193 family C-terminal PX PF00787.24 ORF147337 - 1.4e-09 37.9 2.1 1.4e-09 37.9 2.1 2.2 2 1 0 2 2 2 1 PX domain SMK-1 PF04802.15 ORF147337 - 0.002 18.0 8.6 0.25 11.1 0.2 2.3 2 0 0 2 2 2 2 Component of IIS longevity pathway SMK-1 ANAPC9 PF12856.7 ORF147337 - 0.054 13.7 0.7 0.054 13.7 0.7 2.1 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 9 Vitelline_membr PF10542.9 ORF146429 - 0.36 10.7 2.2 3 7.8 1.0 2.4 2 0 0 2 2 2 0 Vitelline membrane cysteine-rich region DGF-1_4 PF11024.8 ORF146429 - 2.4 9.0 7.0 3.7 8.4 1.1 2.9 3 0 0 3 3 3 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 4 CS PF04969.16 ORF143763 - 0.00077 20.4 0.0 0.002 19.1 0.0 1.8 1 1 0 1 1 1 1 CS domain ESCRT-II PF05871.12 ORF143763 - 0.018 15.3 0.1 0.032 14.5 0.0 1.5 2 0 0 2 2 2 0 ESCRT-II complex subunit Dehydrin PF00257.19 ORF143421 - 0.00035 21.2 0.5 0.00044 20.8 0.5 1.2 1 0 0 1 1 1 1 Dehydrin DUF755 PF05501.11 ORF143421 - 0.058 13.7 16.7 0.1 12.8 16.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) AP3D1 PF06375.11 ORF143421 - 0.079 13.2 8.5 0.12 12.6 8.5 1.2 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 His_Phos_1 PF00300.22 ORF141604 - 2.6e-17 63.2 0.0 1.2e-15 57.7 0.0 2.0 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) His_Phos_2 PF00328.22 ORF141604 - 0.013 14.8 0.1 0.043 13.2 0.0 1.7 1 1 0 2 2 2 0 Histidine phosphatase superfamily (branch 2) HxlR PF01638.17 ORF141454 - 0.12 12.3 0.4 1.4 8.8 0.4 2.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix Rhodanese PF00581.20 ORF140859 - 3.3e-09 37.2 0.0 6.1e-06 26.7 0.0 2.3 2 0 0 2 2 2 2 Rhodanese-like domain EF-hand_1 PF00036.32 ORF13723 - 4.4e-06 25.9 2.2 7e-06 25.2 0.7 2.1 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 ORF13723 - 8.7e-06 25.3 2.2 0.00022 20.9 0.5 3.0 3 0 0 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 ORF13723 - 1.5e-05 25.3 7.1 0.0036 17.7 2.2 2.0 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 ORF13723 - 0.0007 19.4 1.4 0.0032 17.3 0.4 2.4 2 1 1 3 3 3 1 EF-hand domain pair SASP_gamma PF04259.14 ORF13723 - 0.062 13.8 0.1 0.1 13.1 0.1 1.3 1 0 0 1 1 1 0 Small, acid-soluble spore protein, gamma-type EF-hand_5 PF13202.6 ORF13723 - 0.083 12.4 0.4 0.19 11.3 0.4 1.5 1 0 0 1 1 1 0 EF hand CCD48 PF15799.5 ORF13723 - 0.26 9.5 0.0 0.34 9.2 0.0 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 TRP PF06011.12 ORF136522 - 3.8e-05 22.6 12.3 5.1e-05 22.2 12.3 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel Edc3_linker PF16598.5 ORF136522 - 0.11 13.2 3.0 0.17 12.6 3.0 1.2 1 0 0 1 1 1 0 Linker region of enhancer of mRNA-decapping protein 3 Sec20 PF03908.13 ORF135270 - 0.2 11.6 1.3 0.44 10.5 0.1 2.2 2 0 0 2 2 2 0 Sec20 FapA PF03961.13 ORF135270 - 0.22 10.1 6.4 0.26 9.8 6.4 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A ACT PF01842.25 ORF134956 - 0.0091 15.8 0.1 0.02 14.7 0.1 1.6 1 0 0 1 1 1 1 ACT domain ACT_7 PF13840.6 ORF134956 - 0.014 15.2 0.0 0.03 14.1 0.0 1.5 1 0 0 1 1 1 0 ACT domain ACT_4 PF13291.6 ORF134956 - 0.035 14.7 0.1 0.085 13.5 0.0 1.6 2 0 0 2 2 2 0 ACT domain DUF4235 PF14019.6 ORF134956 - 0.15 12.2 0.3 0.62 10.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4235) GARS_A PF01071.19 ORF133849 - 1.4e-41 142.4 0.1 2e-41 141.9 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_C PF02843.16 ORF133849 - 5.6e-31 106.7 0.0 8.3e-31 106.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain TRP PF06011.12 ORF129751 - 3.8e-05 22.6 12.3 5.1e-05 22.2 12.3 1.1 1 0 0 1 1 1 1 Transient receptor potential (TRP) ion channel HxlR PF01638.17 ORF127669 - 0.12 12.3 0.4 1.4 8.8 0.4 2.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix Ac76 PF05814.11 ORF126735 - 0.033 14.2 0.3 0.099 12.7 0.1 1.9 2 0 0 2 2 2 0 Orf76 (Ac76) Ras PF00071.22 ORF123566 - 7.5e-61 204.5 2.1 9.2e-61 204.2 2.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF123566 - 5.5e-36 123.4 0.4 9.4e-36 122.7 0.4 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF123566 - 2.8e-14 52.9 0.3 4e-14 52.4 0.3 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF123566 - 1.5e-07 31.5 0.2 3e-07 30.5 0.1 1.6 1 1 1 2 2 2 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF123566 - 1.1e-05 25.0 0.5 1.5e-05 24.5 0.5 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF123566 - 0.00019 21.4 2.3 0.018 15.0 0.0 2.6 2 1 1 3 3 3 1 RsgA GTPase AAA_16 PF13191.6 ORF123566 - 0.0017 18.8 0.1 0.0037 17.7 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 ORF123566 - 0.0024 18.2 0.4 0.036 14.3 0.1 2.5 1 1 1 2 2 2 1 AAA domain SRPRB PF09439.10 ORF123566 - 0.012 15.0 0.5 0.071 12.5 0.1 2.0 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit PduV-EutP PF10662.9 ORF123566 - 0.013 15.3 0.1 0.026 14.2 0.0 1.6 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation DUF4504 PF14953.6 ORF123566 - 0.021 14.2 0.6 0.028 13.8 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4504) DUF1512 PF07431.12 ORF123566 - 0.031 13.3 0.2 0.069 12.1 0.5 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1512) AAA_24 PF13479.6 ORF123566 - 0.043 13.6 0.9 0.092 12.5 0.9 1.9 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 ORF123566 - 0.074 12.6 0.0 0.18 11.3 0.0 1.5 2 0 0 2 2 2 0 P-loop containing dynein motor region FeoB_N PF02421.18 ORF123566 - 0.077 12.5 0.5 0.18 11.3 0.5 1.7 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_5 PF07728.14 ORF123566 - 0.1 12.6 0.1 0.29 11.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 ORF123566 - 0.13 12.7 3.9 0.69 10.4 3.9 2.1 1 1 0 1 1 1 0 ABC transporter INTS5_N PF14837.6 ORF12254 - 0.0018 17.9 1.4 0.78 9.3 0.2 2.3 2 1 0 2 2 2 2 Integrator complex subunit 5 N-terminus HetR_C PF18460.1 ORF12254 - 0.017 15.0 1.2 0.32 10.9 0.2 2.3 2 0 0 2 2 2 0 Heterocyst differentiation regulator C-terminal Hood domain 2OG-FeII_Oxy PF03171.20 ORF12254 - 0.077 13.5 0.0 0.13 12.8 0.0 1.3 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily ApoC-I PF04691.12 ORF12254 - 0.66 9.9 3.5 12 5.9 0.2 3.2 3 0 0 3 3 3 0 Apolipoprotein C-I (ApoC-1) DUF269 PF03270.13 ORF12254 - 2.4 8.3 4.3 0.57 10.3 0.3 2.0 3 0 0 3 3 3 0 Protein of unknown function, DUF269 ARGLU PF15346.6 ORF12254 - 7 6.5 8.9 0.87 9.5 2.3 2.2 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 Ras PF00071.22 ORF122007 - 1.1e-24 86.8 1.8 1.4e-24 86.5 1.8 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF122007 - 2.8e-18 66.3 0.2 5.2e-18 65.4 0.2 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF122007 - 2.1e-11 43.6 0.2 2.5e-11 43.3 0.2 1.3 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF122007 - 2.5e-05 24.3 0.1 4.7e-05 23.4 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 ORF122007 - 0.0023 17.4 0.1 0.0041 16.6 0.1 1.5 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit FtsK_SpoIIIE PF01580.18 ORF122007 - 0.015 14.7 0.2 0.11 11.8 0.0 2.0 2 0 0 2 2 2 0 FtsK/SpoIIIE family GTP_EFTU PF00009.27 ORF122007 - 0.037 13.6 1.4 0.65 9.5 1.4 2.3 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain TniB PF05621.11 ORF122007 - 0.073 12.5 0.1 0.18 11.2 0.1 1.8 1 1 0 1 1 1 0 Bacterial TniB protein Dynamin_N PF00350.23 ORF122007 - 0.59 10.2 5.3 3 7.9 0.1 2.6 1 1 2 3 3 3 0 Dynamin family GMP_PDE_delta PF05351.11 ORF120446 - 4e-56 189.4 0.0 6.5e-56 188.7 0.0 1.3 1 0 0 1 1 1 1 GMP-PDE, delta subunit Alba PF01918.21 ORF119842 - 5.5e-11 42.1 0.2 8.6e-11 41.5 0.2 1.3 1 0 0 1 1 1 1 Alba DUF5320 PF17253.2 ORF119842 - 0.17 13.0 13.3 2.3 9.3 6.9 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Alba PF01918.21 ORF118804 - 5.5e-11 42.1 0.2 8.6e-11 41.5 0.2 1.3 1 0 0 1 1 1 1 Alba DUF5320 PF17253.2 ORF118804 - 0.17 13.0 13.3 2.3 9.3 6.9 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Tim17 PF02466.19 ORF109280 - 4.3e-07 30.3 0.0 5.8e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family DUF3788 PF12663.7 ORF107352 - 0.037 14.0 2.6 0.04 13.9 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3788) PI3K_P85_iSH2 PF16454.5 ORF107352 - 0.052 13.1 9.1 0.1 12.2 9.1 1.4 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF3937 PF13073.6 ORF107352 - 0.053 13.7 0.2 0.4 10.8 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3937) FTCD_C PF04961.12 ORF107352 - 0.15 11.8 0.5 0.33 10.7 0.5 1.6 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase HxlR PF01638.17 ORF106399 - 0.12 12.3 0.4 1.4 8.8 0.4 2.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix Guanylin PF02058.15 ORF105247 - 3.9 8.0 7.9 1.7 9.2 0.1 3.1 2 1 1 3 3 3 0 Guanylin precursor EF-hand_6 PF13405.6 ORF102520 - 0.0023 17.7 0.0 0.0086 15.9 0.0 2.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_5 PF13202.6 ORF102520 - 0.0041 16.6 0.1 0.013 15.0 0.0 1.9 2 0 0 2 2 2 1 EF hand EF-hand_1 PF00036.32 ORF102520 - 0.0042 16.5 0.0 0.013 15.0 0.0 1.9 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 ORF102520 - 0.018 15.5 0.1 0.077 13.5 0.0 2.1 1 1 1 2 2 2 0 EF-hand domain pair OKR_DC_1_C PF03711.15 ORF101936 - 3.1e-47 160.2 0.0 4.1e-47 159.8 0.0 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain OKR_DC_1 PF01276.20 ORF101936 - 2.1e-24 86.0 0.1 2.6e-24 85.7 0.1 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain DUSP PF06337.12 NODE_31776_length_685_cov_95.316923_g25199_i0forward_frame_1 - 0.35 11.5 2.3 0.68 10.6 2.3 1.6 1 1 0 1 1 1 0 DUSP domain Neur_chan_memb PF02932.16 NODE_31764_length_685_cov_161.307692_g25188_i0forward_frame_1 - 0.09 12.8 5.0 0.14 12.2 5.0 1.3 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region SRP-alpha_N PF04086.13 NODE_31764_length_685_cov_161.307692_g25188_i0forward_frame_1 - 2.4 8.0 14.2 3.1 7.6 14.2 1.4 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal CPBP PF02517.16 NODE_31752_length_685_cov_399.113846_g24853_i1forward_frame_1 - 1e-11 45.0 4.3 2.3e-11 43.9 4.3 1.5 1 0 0 1 1 1 1 CPBP intramembrane metalloprotease zf-SCNM1 PF15803.5 NODE_31730_length_686_cov_56.006144_g25163_i0reverse_frame_1 - 0.6 9.8 9.2 0.23 11.1 2.2 3.0 3 0 0 3 3 3 0 Zinc-finger of sodium channel modifier 1 DUF3156 PF11354.8 NODE_31708_length_686_cov_170.144393_g25141_i0forward_frame_1 - 0.069 13.1 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3156) Ldl_recept_a PF00057.18 NODE_31681_length_687_cov_14.444785_g25119_i0reverse_frame_1 - 0.63 10.3 2.7 0.59 10.4 0.6 2.1 2 0 0 2 2 2 0 Low-density lipoprotein receptor domain class A ABC_membrane PF00664.23 NODE_31671_length_687_cov_117.067485_g25109_i0reverse_frame_1 - 6.3e-32 111.3 3.9 7.2e-32 111.1 3.9 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Toxin_trans PF07952.12 NODE_31671_length_687_cov_117.067485_g25109_i0reverse_frame_1 - 0.0012 18.1 0.1 0.0019 17.4 0.1 1.3 1 1 0 1 1 1 1 Clostridium neurotoxin, Translocation domain MgtE PF01769.16 NODE_31671_length_687_cov_117.067485_g25109_i0reverse_frame_1 - 0.02 15.3 1.4 0.02 15.3 1.4 2.2 2 1 0 2 2 2 0 Divalent cation transporter DUF2371 PF10177.9 NODE_31671_length_687_cov_117.067485_g25109_i0reverse_frame_1 - 0.032 14.4 0.2 0.08 13.1 0.2 1.7 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) TMEM154 PF15102.6 NODE_31671_length_687_cov_117.067485_g25109_i0reverse_frame_1 - 0.095 12.6 0.6 0.2 11.6 0.6 1.5 1 0 0 1 1 1 0 TMEM154 protein family Peptidase_U4 PF03419.13 NODE_31671_length_687_cov_117.067485_g25109_i0reverse_frame_1 - 0.45 9.8 9.7 0.43 9.8 4.7 2.1 2 0 0 2 2 2 0 Sporulation factor SpoIIGA PsbH PF00737.20 NODE_31671_length_687_cov_117.067485_g25109_i0reverse_frame_1 - 0.7 9.7 5.4 0.84 9.4 3.0 2.2 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein Halogen_Hydrol PF10112.9 NODE_31671_length_687_cov_117.067485_g25109_i0reverse_frame_1 - 6.4 6.7 5.9 5.2 7.0 3.5 2.0 2 0 0 2 2 2 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein RRM_1 PF00076.22 NODE_31652_length_687_cov_656.046012_g25091_i0reverse_frame_1 - 8.5e-15 54.3 0.0 2e-14 53.1 0.0 1.6 1 1 1 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 NODE_31652_length_687_cov_656.046012_g25091_i0reverse_frame_1 - 0.00036 20.6 0.0 0.00062 19.8 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif RRM_5 PF13893.6 NODE_31652_length_687_cov_656.046012_g25091_i0reverse_frame_1 - 0.00062 19.4 0.0 0.00088 18.9 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_8 PF11835.8 NODE_31652_length_687_cov_656.046012_g25091_i0reverse_frame_1 - 0.0017 18.5 0.0 0.0026 17.9 0.0 1.3 1 0 0 1 1 1 1 RRM-like domain Nup35_RRM_2 PF14605.6 NODE_31652_length_687_cov_656.046012_g25091_i0reverse_frame_1 - 0.16 12.0 0.0 0.35 10.9 0.0 1.5 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif NUDE_C PF04880.13 NODE_31652_length_687_cov_656.046012_g25091_i0forward_frame_1 - 0.0018 18.8 9.1 0.003 18.0 9.1 1.3 1 0 0 1 1 1 1 NUDE protein, C-terminal conserved region Hydrophob_seed PF14547.6 NODE_31636_length_688_cov_2.839204_g25082_i0reverse_frame_3 - 1.2 9.4 12.2 0.056 13.7 6.3 1.9 2 0 0 2 2 2 0 Hydrophobic seed protein Branch_AA_trans PF05525.13 NODE_31636_length_688_cov_2.839204_g25082_i0reverse_frame_2 - 5.5e-81 272.6 11.3 6.1e-81 272.5 11.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein AnkUBD PF18418.1 NODE_31636_length_688_cov_2.839204_g25082_i0reverse_frame_2 - 0.064 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 Ankyrin ubiquitin-binding domain SusD-like_3 PF14322.6 NODE_31630_length_688_cov_7.494640_g25076_i0reverse_frame_3 - 0.12 12.7 0.0 0.19 12.0 0.0 1.4 1 0 0 1 1 1 0 Starch-binding associating with outer membrane MutS_III PF05192.18 NODE_31630_length_688_cov_7.494640_g25076_i0forward_frame_3 - 2.7e-05 24.5 0.1 4e-05 23.9 0.1 1.2 1 0 0 1 1 1 1 MutS domain III DUF1280 PF06918.14 NODE_31577_length_689_cov_2.149847_g25030_i0forward_frame_3 - 0.045 13.3 0.3 0.11 12.1 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1280) Spc7 PF08317.11 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 0.0019 17.2 11.2 0.0019 17.2 11.2 2.2 1 1 1 2 2 2 1 Spc7 kinetochore protein Fez1 PF06818.15 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 0.0022 18.5 18.9 0.0033 17.9 18.4 1.6 1 1 0 1 1 1 1 Fez1 TINF2_N PF14973.6 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 0.017 15.5 11.0 0.18 12.2 2.5 2.3 2 0 0 2 2 2 0 TERF1-interacting nuclear factor 2 N-terminus DUF948 PF06103.11 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 0.1 12.9 6.7 3.7 7.9 0.6 3.0 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) Adenine_glyco PF03352.13 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 0.23 11.2 5.9 0.085 12.6 0.8 2.0 2 0 0 2 2 2 0 Methyladenine glycosylase Med10 PF09748.9 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 0.27 11.2 6.5 4.1 7.4 0.4 2.6 2 1 0 2 2 2 0 Transcription factor subunit Med10 of Mediator complex DUF489 PF04356.12 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 0.41 10.6 11.0 0.73 9.8 0.4 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF489) DUF4715 PF15835.5 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 0.62 10.1 10.3 0.23 11.5 5.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4715) TPR_MLP1_2 PF07926.12 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 0.91 9.6 16.9 0.094 12.8 7.8 2.5 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein ArsA_ATPase PF02374.15 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 1.4 8.0 11.3 0.13 11.5 5.4 1.9 1 1 1 2 2 2 0 Anion-transporting ATPase Hemagglutinin PF00509.18 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 6.9 4.9 7.9 8.5 4.6 7.5 1.3 1 1 0 1 1 1 0 Haemagglutinin Laminin_II PF06009.12 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 7.3 6.6 14.3 1.5 8.8 3.7 2.8 2 1 1 3 3 3 0 Laminin Domain II DUF1664 PF07889.12 NODE_31573_length_689_cov_4.267584_g25026_i0reverse_frame_2 - 9.9 6.2 18.6 3.4 7.7 0.6 3.5 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) DUF3159 PF11361.8 NODE_31534_length_690_cov_5.287023_g24995_i0forward_frame_2 - 0.074 12.8 0.5 0.11 12.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3159) DUF2207 PF09972.9 NODE_31534_length_690_cov_5.287023_g24995_i0forward_frame_2 - 0.38 9.5 4.2 0.7 8.6 4.0 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) TcpE PF12648.7 NODE_31534_length_690_cov_5.287023_g24995_i0forward_frame_2 - 7.1 7.2 13.2 2.1 8.9 3.7 3.0 3 0 0 3 3 3 0 TcpE family DUF4757 PF15949.5 ORF95673 - 0.36 11.3 7.3 0.1 13.1 2.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4757) rRNA_proc-arch PF13234.6 ORF91595 - 0.0024 17.9 1.6 0.0033 17.4 1.6 1.2 1 0 0 1 1 1 1 rRNA-processing arch domain T4_Gp59_N PF08993.10 ORF91595 - 0.23 11.9 3.7 0.36 11.3 2.3 2.0 2 0 0 2 2 2 0 T4 gene Gp59 loader of gp41 DNA helicase RNA_binding PF01877.17 ORF91595 - 1.9 8.8 7.3 2.5 8.4 3.4 2.5 1 1 2 3 3 3 0 RNA binding Pescadillo_N PF06732.11 ORF89229 - 0.041 13.4 0.0 0.057 13.0 0.0 1.1 1 0 0 1 1 1 0 Pescadillo N-terminus Ndc1_Nup PF09531.10 ORF89087 - 2.6 6.6 3.9 2.7 6.6 3.9 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup MYCBPAP PF14646.6 ORF87943 - 0.52 9.2 2.5 0.77 8.6 2.5 1.2 1 0 0 1 1 1 0 MYCBP-associated protein family Sel1 PF08238.12 ORF87103 - 7.3e-16 58.3 22.1 2.3e-05 24.9 0.2 6.5 6 2 0 6 6 6 3 Sel1 repeat ANAPC3 PF12895.7 ORF87103 - 7.1e-05 23.0 2.0 0.0025 18.0 0.2 2.8 3 0 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF87103 - 8.3e-05 23.2 7.4 0.017 15.8 3.3 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF87103 - 0.018 15.0 0.2 55 4.1 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF87103 - 0.024 15.1 8.5 3.8 8.1 1.3 3.8 2 2 1 3 3 3 0 Tetratricopeptide repeat DUF5619 PF18505.1 ORF87103 - 0.17 11.9 1.3 0.82 9.7 0.0 2.5 1 1 2 3 3 3 0 Domain of unknown function (DUF5619) TPR_2 PF07719.17 ORF87103 - 3.4 8.0 8.7 0.58 10.4 0.2 3.9 5 0 0 5 5 5 0 Tetratricopeptide repeat Presenilin PF01080.17 ORF86033 - 0.23 10.2 5.5 0.28 9.9 5.5 1.1 1 0 0 1 1 1 0 Presenilin GnsAB_toxin PF08178.11 ORF86033 - 0.24 11.4 0.2 0.24 11.4 0.2 2.4 2 0 0 2 2 2 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system Ndc1_Nup PF09531.10 ORF86033 - 1.4 7.5 2.9 1.4 7.5 2.9 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF913 PF06025.12 ORF86033 - 8 5.3 8.7 11 4.9 8.7 1.3 1 1 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF4934 PF16288.5 ORF83472 - 0.092 12.7 0.1 18 5.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4934) Ependymin PF00811.18 ORF82761 - 0.017 15.4 0.1 0.031 14.5 0.1 1.6 1 0 0 1 1 1 0 Ependymin NCBP3 PF10309.9 ORF82761 - 0.12 12.2 1.3 2.2 8.2 0.1 2.4 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 DUF3150 PF11348.8 ORF82761 - 0.17 11.1 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) Pkinase PF00069.25 ORF80946 - 2.8e-34 118.7 0.0 3.2e-34 118.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF80946 - 4.9e-23 81.7 0.0 6.3e-23 81.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF80946 - 3.8e-05 22.6 0.0 5.3e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF80946 - 0.0043 16.4 0.0 0.0063 15.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 ORF80946 - 0.018 14.4 0.1 0.024 14.0 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family WAPL PF07814.13 ORF80946 - 0.14 11.0 0.0 0.14 10.9 0.0 1.1 1 0 0 1 1 1 0 Wings apart-like protein regulation of heterochromatin APH PF01636.23 ORF80946 - 0.31 10.9 4.1 0.17 11.8 1.8 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family DUF1403 PF07183.11 ORF80035 - 0.018 14.6 0.1 0.034 13.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1403) AAA_lid_7 PF17867.1 ORF79364 - 0.13 12.5 0.0 0.26 11.5 0.0 1.7 1 1 0 1 1 1 0 Midasin AAA lid domain T3RM_EcoP15I_C PF18273.1 ORF79364 - 0.3 11.4 0.2 0.3 11.4 0.2 3.1 2 1 2 4 4 4 0 Type III R-M EcoP15I C-terminal domain FAD_binding_3 PF01494.19 ORF78638 - 4.8e-08 32.6 0.0 5.8e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain SE PF08491.10 ORF78638 - 0.013 14.6 0.0 0.02 13.9 0.0 1.2 1 0 0 1 1 1 0 Squalene epoxidase Flagellin_N PF00669.20 ORF78638 - 0.16 12.1 0.2 1.6 8.9 0.0 2.1 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region Aminotran_5 PF00266.19 ORF76732 - 1.1e-44 152.9 0.0 1.2e-44 152.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V FAD_binding_3 PF01494.19 ORF74760 - 4.2e-06 26.2 0.0 4.7e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain SecD_SecF PF02355.16 ORF70910 - 5.6e-70 234.6 10.7 6.7e-70 234.3 10.7 1.0 1 0 0 1 1 1 1 Protein export membrane protein ACR_tran PF00873.19 ORF70910 - 0.0013 16.5 8.5 0.0016 16.2 8.5 1.0 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family PIG-F PF06699.11 ORF70910 - 0.029 14.5 2.8 0.046 13.9 2.5 1.5 1 1 0 1 1 1 0 GPI biosynthesis protein family Pig-F Sterol-sensing PF12349.8 ORF70910 - 0.14 12.0 5.2 0.14 12.0 4.2 1.5 1 1 0 1 1 1 0 Sterol-sensing domain of SREBP cleavage-activation DUF4514 PF14986.6 ORF70910 - 0.25 11.3 0.0 0.25 11.3 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4514) Polysacc_synt_C PF14667.6 ORF70910 - 2 8.4 15.3 0.47 10.5 2.0 2.2 2 0 0 2 2 2 0 Polysaccharide biosynthesis C-terminal domain PRA1 PF03208.19 ORF70910 - 2.3 7.8 8.4 0.42 10.2 1.0 2.3 1 1 1 2 2 2 0 PRA1 family protein bZIP_1 PF00170.21 ORF70380 - 1.1e-08 35.0 16.4 1.1e-08 35.0 16.4 2.7 2 1 1 3 3 3 2 bZIP transcription factor bZIP_2 PF07716.15 ORF70380 - 2e-05 24.6 19.8 8.1e-05 22.6 11.1 2.4 2 0 0 2 2 2 2 Basic region leucine zipper DUF2959 PF11172.8 ORF70380 - 0.00052 20.2 6.5 0.00052 20.2 6.5 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2959) bZIP_Maf PF03131.17 ORF70380 - 0.0029 18.1 11.0 0.0029 18.1 11.0 2.7 1 1 2 3 3 3 1 bZIP Maf transcription factor PRKG1_interact PF15898.5 ORF70380 - 0.33 11.9 20.5 0.4 11.6 0.3 2.2 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain V_ATPase_I PF01496.19 ORF70380 - 0.82 7.5 12.6 1.1 7.1 12.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 ORF70380 - 3 7.9 9.4 5.4 7.1 9.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) UPF0242 PF06785.11 ORF70380 - 4 7.5 21.4 6.5 6.8 21.4 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus FapA PF03961.13 ORF70380 - 4.1 5.9 15.7 5.9 5.4 15.7 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A Filament PF00038.21 ORF70016 - 0.01 15.5 12.6 0.01 15.5 12.6 2.2 1 1 2 3 3 3 0 Intermediate filament protein TPR_MLP1_2 PF07926.12 ORF70016 - 0.01 15.9 10.4 0.01 15.9 10.4 3.1 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein KASH_CCD PF14662.6 ORF70016 - 0.022 14.6 27.4 0.038 13.8 27.3 1.4 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH Apolipoprotein PF01442.18 ORF70016 - 0.041 13.7 9.9 0.067 13.1 9.9 1.4 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain DUF4951 PF16309.5 ORF70016 - 0.052 13.6 3.2 0.13 12.4 3.2 1.7 1 0 0 1 1 1 0 Domian of unknown function (DUF4951) DUF1664 PF07889.12 ORF70016 - 0.21 11.6 15.3 0.11 12.5 7.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF4140 PF13600.6 ORF70016 - 0.42 11.1 8.3 1.4 9.4 8.2 2.0 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Golgin_A5 PF09787.9 ORF70016 - 1.8 7.9 26.2 0.39 10.2 20.9 1.9 1 1 1 2 2 2 0 Golgin subfamily A member 5 Fib_alpha PF08702.10 ORF70016 - 2.1 8.5 26.8 1.1 9.4 14.7 2.7 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family GIT_CC PF16559.5 ORF70016 - 2.3 8.1 13.5 2.9 7.8 2.8 2.4 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor DUF4200 PF13863.6 ORF70016 - 2.5 8.5 28.1 1.2 9.5 20.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) CENP-H PF05837.12 ORF70016 - 2.6 8.5 20.8 0.24 11.8 12.6 2.2 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Snapin_Pallidin PF14712.6 ORF70016 - 2.6 8.5 24.2 0.31 11.5 10.3 3.2 1 1 2 3 3 3 0 Snapin/Pallidin Patched PF02460.18 ORF70016 - 2.7 5.9 8.2 3.5 5.6 8.2 1.1 1 0 0 1 1 1 0 Patched family DUF4407 PF14362.6 ORF70016 - 3.1 7.0 16.0 2 7.7 7.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Jnk-SapK_ap_N PF09744.9 ORF70016 - 4.9 7.4 27.8 0.16 12.2 18.3 2.5 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 DUF641 PF04859.12 ORF70016 - 5.7 7.3 23.6 0.084 13.2 3.1 3.1 1 1 1 3 3 3 0 Plant protein of unknown function (DUF641) Csm1_N PF18504.1 ORF70016 - 6.5 7.2 24.2 3.1 8.2 0.6 4.4 2 2 2 4 4 4 0 Csm1 N-terminal domain ABC_tran_CTD PF16326.5 ORF70016 - 6.9 7.0 17.5 12 6.3 0.6 3.4 2 1 1 3 3 3 0 ABC transporter C-terminal domain Goodbye PF17109.5 ORF70016 - 8.2 6.9 8.7 6.8 7.2 2.4 2.5 1 1 2 3 3 3 0 fungal STAND N-terminal Goodbye domain DUF1635 PF07795.11 ORF70016 - 8.9 6.1 17.1 2.1 8.2 13.6 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1635) GLTP PF08718.11 ORF69262 - 2.5e-27 96.0 0.0 3.3e-27 95.6 0.0 1.2 1 0 0 1 1 1 1 Glycolipid transfer protein (GLTP) DUF2189 PF09955.9 ORF63685 - 0.054 13.7 0.0 0.054 13.7 0.0 2.3 2 1 0 2 2 2 0 Predicted integral membrane protein (DUF2189) Glutaredoxin2_C PF04399.13 ORF61906 - 0.02 14.7 0.1 0.066 13.0 0.0 1.9 2 0 0 2 2 2 0 Glutaredoxin 2, C terminal domain TMEM223 PF14640.6 ORF59119 - 0.04 14.1 0.0 0.076 13.2 0.0 1.5 1 0 0 1 1 1 0 Transmembrane protein 223 Importin_rep PF18773.1 ORF59119 - 0.057 13.1 0.3 0.12 12.1 0.3 1.4 1 0 0 1 1 1 0 Importin 13 repeat OSCP PF00213.18 ORF59029 - 9.3e-44 149.6 1.3 1.1e-43 149.3 1.3 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit PAT1 PF09770.9 ORF57287 - 1.5 7.0 6.2 1.7 6.8 6.2 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 UDG PF03167.19 ORF55067 - 1.7e-28 99.6 0.0 2.3e-28 99.1 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Flocculin PF00624.18 ORF51744 - 0.93 9.8 3.1 2.3 8.5 0.2 2.2 2 0 0 2 2 2 0 Flocculin repeat Sel1 PF08238.12 ORF48007 - 7.3e-16 58.3 22.1 2.3e-05 24.9 0.2 6.5 6 2 0 6 6 6 3 Sel1 repeat ANAPC3 PF12895.7 ORF48007 - 7.1e-05 23.0 2.0 0.0025 18.0 0.2 2.8 3 0 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 ORF48007 - 8.3e-05 23.2 7.4 0.017 15.8 3.3 2.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 ORF48007 - 0.018 15.0 0.2 55 4.1 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 ORF48007 - 0.024 15.1 8.5 3.8 8.1 1.3 3.8 2 2 1 3 3 3 0 Tetratricopeptide repeat DUF5619 PF18505.1 ORF48007 - 0.17 11.9 1.3 0.82 9.7 0.0 2.5 1 1 2 3 3 3 0 Domain of unknown function (DUF5619) TPR_2 PF07719.17 ORF48007 - 3.4 8.0 8.7 0.58 10.4 0.2 3.9 5 0 0 5 5 5 0 Tetratricopeptide repeat Glycos_transf_1 PF00534.20 ORF47451 - 3e-39 134.3 0.0 4e-39 133.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 ORF47451 - 2.8e-26 92.5 0.0 3.8e-26 92.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 ORF47451 - 7.8e-05 23.0 0.0 0.00013 22.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 ORF47451 - 0.00079 19.5 0.0 0.43 10.5 0.0 2.4 2 0 0 2 2 2 2 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 ORF47451 - 0.0031 18.0 0.1 0.31 11.5 0.0 2.8 2 1 0 3 3 3 1 Glycosyl transferase 4-like domain DUF615 PF04751.14 ORF47451 - 0.072 13.1 0.6 1.8 8.5 0.2 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF615) GUCT PF08152.12 ORF45636 - 1.9e-15 56.9 0.0 3e-15 56.3 0.0 1.3 1 0 0 1 1 1 1 GUCT (NUC152) domain DUF1805 PF08827.11 ORF45636 - 0.073 13.4 0.1 0.26 11.7 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) Inhibitor_I68 PF10468.9 ORF45517 - 1.8e-05 25.0 3.1 1.8e-05 25.0 3.1 3.7 2 1 1 3 3 3 1 Carboxypeptidase inhibitor I68 CTP-dep_RFKase PF01982.16 ORF44833 - 0.0022 18.1 0.0 0.0047 17.0 0.0 1.5 2 0 0 2 2 2 1 Domain of unknown function DUF120 PTPLA PF04387.14 ORF41254 - 9.7e-07 28.7 10.6 9.7e-07 28.7 10.6 1.8 2 0 0 2 2 2 1 Protein tyrosine phosphatase-like protein, PTPLA RBFA PF02033.18 ORF4072 - 6e-33 113.4 0.0 9.6e-33 112.8 0.0 1.3 1 0 0 1 1 1 1 Ribosome-binding factor A DUF3047 PF11249.8 ORF4072 - 0.12 11.8 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3047) Bax1-I PF01027.20 ORF34900 - 4e-29 101.9 23.7 4.8e-29 101.7 23.7 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 SLATT_3 PF18184.1 ORF34900 - 4.7 7.3 5.6 2.2 8.4 0.3 2.1 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 3 RMP PF14996.6 ORF34236 - 0.054 13.7 5.9 0.1 12.8 5.9 1.4 1 0 0 1 1 1 0 Retinal Maintenance CAP160 PF07918.11 ORF32307 - 1.4 8.7 2.9 2.5 7.9 2.9 1.3 1 0 0 1 1 1 0 CAP160 repeat Sugar_tr PF00083.24 ORF32253 - 6.6e-30 104.4 7.0 8.3e-30 104.0 7.0 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF32253 - 6.2e-16 58.3 8.7 7.4e-16 58.0 8.7 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_5 PF05631.14 ORF32253 - 0.049 12.5 4.3 0.062 12.2 3.1 1.7 2 0 0 2 2 2 0 Sugar-tranasporters, 12 TM MFS_1_like PF12832.7 ORF32253 - 0.15 10.9 7.9 0.23 10.3 4.3 2.2 1 1 1 2 2 2 0 MFS_1 like family WTF PF03303.13 ORF32253 - 0.79 9.4 9.7 0.11 12.2 5.2 1.9 2 0 0 2 2 2 0 WTF protein MMPL PF03176.15 ORF32253 - 8 5.3 6.3 3.4 6.5 3.5 1.7 2 0 0 2 2 2 0 MMPL family Aldo_ket_red PF00248.21 ORF32024 - 7e-36 123.9 0.0 8e-36 123.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family DUF1298 PF06974.13 ORF27676 - 0.012 15.5 0.1 0.021 14.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1298) AP2 PF00847.20 ORF25518 - 0.17 12.2 0.5 0.17 12.2 0.5 2.0 2 0 0 2 2 2 0 AP2 domain CDP-OH_P_transf PF01066.21 ORF25355 - 1.1e-10 42.1 0.4 1.1e-10 42.1 0.4 2.1 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Pkinase PF00069.25 ORF23865 - 2.8e-42 144.9 0.2 4.5e-42 144.2 0.2 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF23865 - 3.6e-29 101.8 0.0 4.9e-29 101.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF23865 - 0.0063 15.9 0.0 0.021 14.2 0.0 1.8 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 ORF23865 - 0.0067 16.0 0.0 0.0067 16.0 0.0 1.8 3 0 0 3 3 3 1 RIO1 family FTA2 PF13095.6 ORF23865 - 0.012 15.3 0.0 0.033 13.8 0.0 1.8 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 ORF23865 - 0.061 12.1 1.3 0.087 11.6 1.3 1.4 1 1 0 1 1 1 0 Fungal protein kinase YdjO PF14169.6 ORF23551 - 2.7 7.8 7.4 0.74 9.6 0.3 2.9 1 1 2 3 3 3 0 Cold-inducible protein YdjO COX5B PF01215.19 ORF21759 - 6.1e-12 45.4 0.0 1e-11 44.6 0.0 1.3 1 0 0 1 1 1 1 Cytochrome c oxidase subunit Vb XhlA PF10779.9 ORF21336 - 0.015 15.5 0.8 0.3 11.3 1.9 2.2 2 0 0 2 2 2 0 Haemolysin XhlA Peptidase_S49_N PF08496.10 ORF21336 - 4.4 7.4 5.4 1.9 8.5 1.4 2.1 2 0 0 2 2 2 0 Peptidase family S49 N-terminal DUF908 PF06012.12 ORF20752 - 0.47 9.8 7.9 0.57 9.5 7.9 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) Peptidase_S51 PF03575.17 ORF17416 - 3.7e-62 209.6 0.0 4.2e-62 209.5 0.0 1.0 1 0 0 1 1 1 1 Peptidase family S51 BPL_N PF09825.9 ORF17416 - 0.017 14.3 0.0 0.026 13.6 0.0 1.2 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal nos_propeller_2 PF18793.1 ORF17416 - 0.11 12.9 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Nitrous oxide reductase propeller repeat 2 Response_reg PF00072.24 ORF152936 - 3e-26 91.8 0.0 4.7e-26 91.2 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain Trans_reg_C PF00486.28 ORF152936 - 1.8e-23 82.4 0.0 3.3e-23 81.5 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulatory protein, C terminal HTH_11 PF08279.12 ORF152936 - 0.023 14.6 0.0 0.41 10.6 0.0 2.7 3 0 0 3 3 3 0 HTH domain EamA PF00892.20 ORF152748 - 4.9e-19 68.9 34.5 8.6e-11 42.2 14.2 2.1 2 0 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 ORF152748 - 0.0052 16.1 11.6 0.0052 16.1 11.6 2.1 1 1 1 2 2 2 1 Purine nucleobase transmembrane transport adh_short PF00106.25 ORF150919 - 0.00011 21.8 0.2 0.001 18.5 0.2 2.0 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 ORF150919 - 0.0004 20.0 0.0 0.00061 19.4 0.0 1.4 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase 3Beta_HSD PF01073.19 ORF150919 - 0.02 13.9 0.0 0.029 13.4 0.0 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 ORF150919 - 0.061 12.8 0.2 0.65 9.4 0.2 2.1 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 ORF150919 - 0.11 11.6 0.2 0.34 10.0 0.0 2.0 1 1 1 2 2 2 0 RmlD substrate binding domain PNP_UDP_1 PF01048.20 ORF14534 - 9.9e-19 67.5 0.2 1.2e-18 67.2 0.2 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily SEC-C PF02810.15 ORF14534 - 1.9 8.5 5.2 3.1 7.8 0.6 2.5 2 0 0 2 2 2 0 SEC-C motif RNA_pol_Rpb2_6 PF00562.28 ORF143972 - 1.4e-56 192.3 0.1 1.7e-56 192.0 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 ORF143972 - 1e-32 112.4 0.3 1.4e-32 111.9 0.3 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 OrfB_Zn_ribbon PF07282.11 ORF143972 - 0.011 15.7 1.2 0.021 14.7 1.2 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain FYVE_2 PF02318.16 ORF143972 - 0.032 14.4 1.1 0.053 13.7 1.1 1.3 1 0 0 1 1 1 0 FYVE-type zinc finger Rubredoxin_2 PF18073.1 ORF143972 - 0.24 11.2 1.5 12 5.7 0.2 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain RecR PF02132.15 ORF143972 - 0.68 9.6 4.7 5.6 6.6 4.8 2.1 1 1 0 1 1 1 0 RecR protein TF_Zn_Ribbon PF08271.12 ORF143972 - 1.8 8.1 6.4 2 8.0 1.4 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding DDA1 PF10172.9 ORF141308 - 3.6 7.9 8.1 1.2 9.5 0.8 3.4 3 1 0 3 3 3 0 Det1 complexing ubiquitin ligase BTB PF00651.31 ORF141190 - 1.5e-23 83.1 2.7 1.4e-22 80.0 0.2 2.4 1 1 1 2 2 2 1 BTB/POZ domain DIT1_PvcA PF05141.12 ORF141190 - 0.042 13.3 0.0 0.062 12.7 0.0 1.4 1 1 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein BACK PF07707.15 ORF141190 - 0.09 12.9 1.2 0.31 11.1 0.1 2.4 2 1 0 3 3 3 0 BTB And C-terminal Kelch NMT PF01233.19 ORF141190 - 0.1 12.5 0.1 2 8.3 0.0 2.1 2 0 0 2 2 2 0 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain DUF4757 PF15949.5 ORF139533 - 0.36 11.3 7.3 0.1 13.1 2.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4757) Lectin_C_term PF18022.1 ORF138545 - 0.46 11.0 5.6 0.28 11.7 2.9 1.9 2 0 0 2 2 2 0 Ricin-type beta-trefoil lectin C-terminal domain Oleosin PF01277.17 ORF137798 - 0.19 11.5 6.2 0.078 12.7 3.9 1.5 2 0 0 2 2 2 0 Oleosin DUF1143 PF06608.11 ORF13646 - 0.021 14.9 0.4 0.038 14.0 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) Lectin_C_term PF18022.1 ORF13646 - 0.37 11.3 5.1 0.28 11.7 2.9 1.9 2 0 0 2 2 2 0 Ricin-type beta-trefoil lectin C-terminal domain AI-2E_transport PF01594.16 ORF135856 - 1.1e-15 57.6 9.3 1.6e-15 57.1 9.3 1.1 1 0 0 1 1 1 1 AI-2E family transporter DUF3040 PF11239.8 ORF135856 - 6.7 7.1 7.3 0.89 9.9 0.1 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF3040) ubiquitin PF00240.23 ORF135493 - 2.4e-98 321.9 15.7 1.1e-32 111.6 0.9 3.0 3 0 0 3 3 3 3 Ubiquitin family Rad60-SLD PF11976.8 ORF135493 - 1.5e-45 152.9 17.8 4.7e-15 55.2 1.4 3.0 3 0 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 ORF135493 - 8.3e-17 61.4 7.2 0.00033 21.0 0.2 4.6 3 3 0 3 3 3 3 Ubiquitin-like domain TBK1_ULD PF18396.1 ORF135493 - 3.9e-12 45.9 3.8 0.012 15.5 0.1 3.2 3 0 0 3 3 3 3 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 ORF135493 - 1.8e-10 40.9 1.8 0.062 13.4 0.0 3.9 3 3 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 ORF135493 - 3.4e-10 40.1 4.6 0.039 14.3 0.1 3.1 3 0 0 3 3 3 3 Ubiquitin-like domain DUF2407 PF10302.9 ORF135493 - 2.7e-09 37.5 0.9 0.13 12.9 0.0 3.2 1 1 1 3 3 3 3 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 ORF135493 - 1.9e-07 31.1 17.3 4.1 7.5 0.2 6.0 6 0 0 6 6 6 3 Ubiquitin-like domain Sde2_N_Ubi PF13019.6 ORF135493 - 3.1e-06 27.1 0.2 1.8 8.3 0.0 3.1 1 1 2 3 3 3 3 Silencing defective 2 N-terminal ubiquitin domain DUF2870 PF11069.8 ORF135493 - 0.0002 21.7 0.0 17 5.9 0.0 3.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2870) UDP-g_GGTase PF06427.11 ORF135493 - 0.0028 17.8 3.4 2.8 8.1 0.1 3.2 4 0 0 4 4 3 2 UDP-glucose:Glycoprotein Glucosyltransferase DUF3861 PF12977.7 ORF135493 - 0.0029 17.7 1.2 25 5.1 0.0 3.2 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3861) DUF969 PF06149.12 ORF135493 - 0.0067 15.9 0.0 12 5.2 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF969) Big_3_3 PF13750.6 ORF135493 - 0.01 15.5 0.0 32 4.1 0.0 3.1 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) Big_7 PF17957.1 ORF135493 - 0.012 16.3 0.2 66 4.4 0.0 3.1 3 0 0 3 3 3 0 Bacterial Ig domain Raf1_HTH PF18579.1 ORF135493 - 0.016 14.9 0.1 34 4.2 0.0 3.3 3 0 0 3 3 3 0 Rubisco accumulation factor 1 helix turn helix domain NEAT PF05031.12 ORF135493 - 0.037 14.6 2.3 2.5 8.8 2.3 2.6 1 1 0 1 1 1 0 Iron Transport-associated domain MPS2 PF17060.5 ORF135493 - 0.038 13.3 2.8 18 4.5 0.1 3.0 1 1 0 3 3 3 0 Monopolar spindle protein 2 ORF11CD3 PF10549.9 ORF135493 - 0.059 13.5 0.0 62 3.8 0.0 3.7 3 0 0 3 3 3 0 ORF11CD3 domain TmoB PF06234.12 ORF135493 - 0.076 13.1 6.1 27 4.9 0.1 3.7 3 3 0 3 3 3 0 Toluene-4-monooxygenase system protein B (TmoB) Myosin_N PF02736.19 ORF135493 - 0.12 12.2 4.3 43 4.0 0.1 4.4 3 0 0 3 3 3 0 Myosin N-terminal SH3-like domain FlgD_ig PF13860.6 ORF135493 - 0.16 11.9 5.4 40 4.2 0.1 3.4 3 0 0 3 3 3 0 FlgD Ig-like domain ProRS-C_2 PF09181.10 ORF135493 - 0.18 11.9 2.4 87 3.4 0.1 3.1 3 0 0 3 3 3 0 Prolyl-tRNA synthetase, C-terminal Phage-tail_1 PF09097.10 ORF135493 - 0.21 11.4 0.7 70 3.1 0.0 2.9 3 0 0 3 3 3 0 Baseplate structural protein, domain 1 DMA PF03474.14 ORF135493 - 0.46 10.1 1.7 1.1e+02 2.5 0.0 3.2 3 0 0 3 3 3 0 DMRTA motif UL11 PF11094.8 ORF135493 - 0.96 9.4 3.6 1e+02 2.9 0.1 3.1 3 0 0 3 3 3 0 Membrane-associated tegument protein TMEM43 PF07787.12 ORF135284 - 1.8 7.9 5.9 2.4 7.5 5.9 1.2 1 0 0 1 1 1 0 Transmembrane protein 43 Sulfotransfer_2 PF03567.14 ORF133742 - 0.00044 20.2 0.0 0.00098 19.1 0.0 1.6 1 1 0 1 1 1 1 Sulfotransferase family Ependymin PF00811.18 ORF132642 - 0.017 15.4 0.1 0.031 14.5 0.1 1.6 1 0 0 1 1 1 0 Ependymin NCBP3 PF10309.9 ORF132642 - 0.12 12.2 1.3 2.2 8.2 0.1 2.4 2 0 0 2 2 2 0 Nuclear cap-binding protein subunit 3 DUF3150 PF11348.8 ORF132642 - 0.17 11.1 0.0 0.27 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) DUF498 PF04430.14 ORF129763 - 1.5e-20 73.3 0.0 3.1e-20 72.3 0.0 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF498/DUF598) Pkinase PF00069.25 ORF124527 - 2.4e-30 105.8 0.1 2.6e-30 105.7 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF124527 - 4.6e-20 72.0 0.0 4.9e-20 71.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 ORF124527 - 9e-08 31.3 0.0 1.1e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 ORF124527 - 8.1e-06 25.9 0.1 0.0011 18.9 0.0 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 ORF124527 - 0.0024 16.9 0.1 0.0034 16.4 0.1 1.2 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase Kinase-like PF14531.6 ORF124527 - 0.0048 16.3 0.1 0.13 11.6 0.0 2.1 2 0 0 2 2 2 1 Kinase-like Choline_kinase PF01633.20 ORF124527 - 0.051 13.1 0.1 0.095 12.3 0.1 1.4 1 0 0 1 1 1 0 Choline/ethanolamine kinase TPT PF03151.16 ORF124263 - 5e-46 157.4 12.6 5.7e-46 157.2 12.6 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 ORF124263 - 4.4e-07 30.1 21.8 0.00054 20.1 3.7 2.1 2 0 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 ORF124263 - 0.15 11.3 12.8 4.4 6.4 12.8 2.2 1 1 0 1 1 1 0 Purine nucleobase transmembrane transport CoA_binding_3 PF13727.6 ORF124263 - 0.4 10.7 10.2 0.76 9.8 3.2 2.2 2 0 0 2 2 2 0 CoA-binding domain CRT-like PF08627.10 ORF124263 - 0.58 9.1 9.5 0.12 11.3 2.6 2.1 1 1 1 2 2 2 0 CRT-like, chloroquine-resistance transporter-like Nuc_sug_transp PF04142.15 ORF124263 - 1.3 8.2 9.4 6.4 5.8 9.4 1.9 1 1 0 1 1 1 0 Nucleotide-sugar transporter 14-3-3 PF00244.20 ORF121692 - 3.8e-89 298.0 4.6 4.5e-89 297.8 4.6 1.0 1 0 0 1 1 1 1 14-3-3 protein FlaF PF07309.11 ORF121692 - 0.016 15.2 0.2 0.041 13.9 0.2 1.7 1 0 0 1 1 1 0 Flagellar protein FlaF LtrA PF06772.11 ORF12145 - 1.2 8.2 11.2 0.35 10.0 3.1 2.1 2 0 0 2 2 2 0 Bacterial low temperature requirement A protein (LtrA) SH3_9 PF14604.6 ORF120329 - 9e-05 22.3 0.0 0.00016 21.5 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF120329 - 0.0069 16.0 0.0 0.01 15.4 0.0 1.3 1 0 0 1 1 1 1 SH3 domain Tom5 PF10642.9 ORF120329 - 0.16 12.0 1.7 0.54 10.3 1.4 2.0 2 0 0 2 2 2 0 Mitochondrial import receptor subunit or translocase MutH PF02976.15 ORF118608 - 6.8e-34 116.0 0.0 9.9e-34 115.5 0.0 1.2 1 0 0 1 1 1 1 DNA mismatch repair enzyme MutH Exo_endo_phos PF03372.23 ORF118496 - 2.1e-06 27.4 0.0 2.7e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family MORN PF02493.20 ORF111514 - 0.00014 21.6 6.8 0.75 9.8 0.4 4.0 4 0 0 4 4 4 3 MORN repeat DUF5503 PF17607.2 ORF111514 - 0.079 13.3 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5503) SpoU_methylase PF00588.19 ORF110003 - 8.8e-37 126.4 0.1 1.2e-36 126.0 0.1 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family SpoU_methylas_C PF12105.8 ORF110003 - 7.9e-25 86.3 0.9 1.6e-24 85.3 0.9 1.5 1 0 0 1 1 1 1 SpoU, rRNA methylase, C-terminal SHIPPO-rpt PF07004.12 ORF106237 - 1.6e-14 54.0 30.3 1.9e-05 25.4 2.7 5.7 5 0 0 5 5 5 5 Sperm-tail PG-rich repeat Xan_ur_permease PF00860.20 NODE_31940_length_682_cov_3.285935_g25332_i0reverse_frame_1 - 6.3e-50 170.0 22.6 7e-50 169.8 22.6 1.0 1 0 0 1 1 1 1 Permease family DUF1414 PF07208.11 NODE_31939_length_682_cov_3.690881_g25331_i0forward_frame_1 - 0.13 12.3 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1414) DUF3431 PF11913.8 NODE_31931_length_682_cov_75.506955_g25323_i0reverse_frame_1 - 8.7e-10 38.7 0.0 2.4e-09 37.3 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF3431) Sulfotransfer_2 PF03567.14 NODE_31917_length_682_cov_164.389490_g25311_i0forward_frame_1 - 5.4e-05 23.2 4.1 0.0011 19.0 4.1 2.3 1 1 0 1 1 1 1 Sulfotransferase family NDK PF00334.19 NODE_31825_length_684_cov_61.251156_g25238_i0forward_frame_1 - 3.9e-05 23.7 0.0 5.8e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Nucleoside diphosphate kinase DUF3493 PF11998.8 NODE_31825_length_684_cov_61.251156_g25238_i0forward_frame_1 - 0.063 13.4 0.1 6 7.1 0.0 3.0 3 0 0 3 3 3 0 Low psii accumulation1 / Rep27 RCC1_2 PF13540.6 NODE_31813_length_684_cov_167.375963_g25227_i0reverse_frame_1 - 1.7e-09 37.2 5.5 0.12 12.2 0.1 4.2 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat Med3 PF11593.8 NODE_31813_length_684_cov_167.375963_g25227_i0reverse_frame_1 - 0.18 11.0 12.0 0.29 10.3 12.0 1.5 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal NACHT PF05729.12 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 9.8e-16 58.1 0.1 1.4e-15 57.6 0.1 1.2 1 0 0 1 1 1 1 NACHT domain AAA_16 PF13191.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 2.6e-07 31.2 1.8 0.00069 20.0 0.1 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 1.9e-05 25.0 0.1 0.00012 22.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.00019 21.8 0.0 0.00031 21.2 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Roc PF08477.13 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.00042 20.5 0.0 0.00072 19.8 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA_25 PF13481.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.0014 18.2 0.0 0.17 11.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.0049 16.6 0.7 0.0073 16.0 0.1 1.6 2 0 0 2 2 2 1 Sigma-54 interaction domain NB-ARC PF00931.22 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.0064 15.7 0.1 0.017 14.3 0.1 1.6 2 0 0 2 2 2 1 NB-ARC domain AAA_7 PF12775.7 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.0098 15.4 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_24 PF13479.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.059 13.1 0.0 0.08 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.059 13.5 0.1 0.11 12.6 0.1 1.7 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.062 12.6 0.0 0.16 11.3 0.0 1.6 2 0 0 2 2 2 0 KaiC FtsK_SpoIIIE PF01580.18 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.062 12.6 0.0 0.89 8.9 0.0 2.1 1 1 0 2 2 2 0 FtsK/SpoIIIE family TIR_2 PF13676.6 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.085 13.5 0.0 18 6.0 0.0 2.2 2 0 0 2 2 2 0 TIR domain ATPase_2 PF01637.18 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.086 12.7 0.0 3.2 7.6 0.0 2.1 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea TsaE PF02367.17 NODE_31807_length_684_cov_323.577812_g25222_i0forward_frame_1 - 0.17 11.9 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE dCMP_cyt_deam_1 PF00383.23 NODE_31806_length_684_cov_355.269646_g25221_i0reverse_frame_1 - 3.2e-09 36.6 0.0 5.2e-09 35.9 0.0 1.5 1 1 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 NODE_31806_length_684_cov_355.269646_g25221_i0reverse_frame_1 - 6.1e-05 22.8 0.1 9.2e-05 22.2 0.1 1.2 1 0 0 1 1 1 1 MafB19-like deaminase OTT_1508_deam PF14441.6 NODE_31806_length_684_cov_355.269646_g25221_i0reverse_frame_1 - 0.011 15.8 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 0 OTT_1508-like deaminase SNAD4 PF18750.1 NODE_31806_length_684_cov_355.269646_g25221_i0reverse_frame_1 - 0.09 12.9 0.1 0.19 11.9 0.1 1.5 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 NAD1 PF18778.1 NODE_31806_length_684_cov_355.269646_g25221_i0reverse_frame_1 - 0.09 12.9 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 Cyclin PF08613.11 NODE_31792_length_685_cov_2.543077_g25215_i0reverse_frame_2 - 0.072 13.5 0.1 0.11 12.8 0.1 1.3 1 0 0 1 1 1 0 Cyclin DUF4849 PF16141.5 NODE_31792_length_685_cov_2.543077_g25215_i0reverse_frame_2 - 0.24 10.6 0.0 0.36 10.1 0.0 1.2 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 Holin_BhlA PF10960.8 NODE_31730_length_686_cov_56.006144_g25163_i0reverse_frame_2 - 0.49 10.4 0.1 0.49 10.4 0.1 2.6 4 0 0 4 4 4 0 BhlA holin family PPR_2 PF13041.6 NODE_31725_length_686_cov_85.064516_g25158_i0forward_frame_2 - 0.015 15.5 0.0 0.51 10.6 0.0 2.7 1 1 1 2 2 2 0 PPR repeat family PPR_3 PF13812.6 NODE_31725_length_686_cov_85.064516_g25158_i0forward_frame_2 - 0.054 13.6 0.0 8.1 6.6 0.0 2.3 2 0 0 2 2 2 0 Pentatricopeptide repeat domain PHD PF00628.29 NODE_31718_length_686_cov_102.474654_g25151_i0reverse_frame_3 - 0.003 17.4 4.7 0.003 17.4 4.7 2.0 2 0 0 2 2 2 1 PHD-finger Rootletin PF15035.6 NODE_31718_length_686_cov_102.474654_g25151_i0reverse_frame_3 - 0.32 11.0 3.0 0.91 9.5 3.0 1.7 1 1 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion zf-RING_9 PF13901.6 NODE_31718_length_686_cov_102.474654_g25151_i0reverse_frame_3 - 0.42 10.5 10.6 0.17 11.8 3.5 2.3 2 0 0 2 2 2 0 Putative zinc-RING and/or ribbon # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks96.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks96.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks96.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks96.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:34:57 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Frigida PF07899.11 NODE_31711_length_686_cov_157.374808_g25144_i0forward_frame_3 - 0.02 14.2 0.0 0.036 13.3 0.0 1.3 1 0 0 1 1 1 0 Frigida-like protein Sox17_18_mid PF12067.8 NODE_31711_length_686_cov_157.374808_g25144_i0forward_frame_2 - 0.092 12.8 0.3 0.2 11.7 0.3 1.6 1 0 0 1 1 1 0 Sox 17/18 central domain V4R PF02830.18 NODE_31705_length_686_cov_221.824885_g25138_i0forward_frame_3 - 0.16 12.0 0.1 0.28 11.2 0.1 1.3 1 0 0 1 1 1 0 V4R domain NOA36 PF06524.12 NODE_31681_length_687_cov_14.444785_g25119_i0forward_frame_2 - 0.25 10.7 4.1 0.34 10.2 4.1 1.1 1 0 0 1 1 1 0 NOA36 protein Ku_PK_bind PF08785.11 NODE_31681_length_687_cov_14.444785_g25119_i0forward_frame_2 - 0.26 11.4 5.1 0.53 10.4 3.5 2.2 1 1 1 2 2 2 0 Ku C terminal domain like SWI2_SNF2 PF18766.1 NODE_31666_length_687_cov_172.049080_g24116_i1forward_frame_2 - 0.21 11.2 0.6 0.56 9.8 0.1 1.7 2 0 0 2 2 2 0 SWI2/SNF2 ATPase Polyoma_coat2 PF00761.20 NODE_31652_length_687_cov_656.046012_g25091_i0reverse_frame_2 - 2.3 7.9 19.8 3 7.5 19.8 1.1 1 0 0 1 1 1 0 Polyomavirus coat protein PsaL PF02605.15 NODE_31650_length_687_cov_1589.070552_g25089_i0reverse_frame_2 - 0.056 13.1 0.4 0.11 12.1 0.4 1.5 1 0 0 1 1 1 0 Photosystem I reaction centre subunit XI GST_C PF00043.25 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 2e-09 37.6 0.1 3.5e-09 36.8 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 1.4e-08 35.1 0.0 2.9e-08 34.0 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 4e-08 33.5 0.0 6.9e-08 32.7 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 1e-06 28.8 0.1 2.7e-06 27.5 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 0.00045 20.2 0.0 0.0008 19.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 NODE_31647_length_687_cov_2468.771472_g23149_i3reverse_frame_2 - 0.065 13.5 0.0 0.35 11.2 0.0 2.0 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain Mito_carr PF00153.27 ORF96859 - 1.8e-44 149.6 0.3 2.5e-19 69.0 0.3 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF4815 PF16075.5 ORF96859 - 0.09 11.1 0.0 0.12 10.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4815) TFB6 PF17110.5 ORF95628 - 0.19 11.5 0.1 0.32 10.7 0.1 1.3 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH rve PF00665.26 ORF92165 - 4.7e-12 46.1 0.0 7.4e-12 45.5 0.0 1.3 1 0 0 1 1 1 1 Integrase core domain HTH_21 PF13276.6 ORF92165 - 2.1e-05 24.6 0.7 4.2e-05 23.6 0.7 1.4 1 0 0 1 1 1 1 HTH-like domain YhfZ_C PF14503.6 ORF9146 - 1.7e-83 279.8 0.0 1.8e-83 279.7 0.0 1.0 1 0 0 1 1 1 1 YhfZ C-terminal domain DUF996 PF06195.13 ORF91066 - 0.0083 16.4 10.4 0.074 13.3 6.7 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF996) Yip1 PF04893.17 ORF91066 - 0.98 9.1 6.3 0.073 12.8 1.2 1.8 2 1 0 2 2 2 0 Yip1 domain bZIP_Maf PF03131.17 ORF89218 - 0.52 10.9 12.6 1.9 9.1 0.8 3.1 3 0 0 3 3 3 0 bZIP Maf transcription factor Peptidase_S41 PF03572.18 ORF85698 - 3.7e-18 65.6 0.0 7.4e-18 64.7 0.0 1.5 1 1 0 1 1 1 1 Peptidase family S41 WaaY PF06176.11 ORF83319 - 0.042 13.5 0.0 0.084 12.5 0.0 1.5 2 0 0 2 2 2 0 Lipopolysaccharide core biosynthesis protein (WaaY) NLRC4_HD2 PF17776.1 ORF83154 - 0.16 12.5 0.4 16 6.1 0.2 2.8 2 1 1 3 3 3 0 NLRC4 helical domain HD2 CSN8_PSD8_EIF3K PF10075.9 ORF80606 - 3.6e-16 59.4 0.2 5e-16 59.0 0.2 1.1 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family Mod_r PF07200.13 ORF77596 - 3.1e-13 50.1 13.5 4e-13 49.7 13.5 1.1 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein Piezo_RRas_bdg PF12166.8 ORF77596 - 0.0047 16.3 1.7 0.0058 16.0 1.7 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain Muted PF14942.6 ORF77596 - 0.22 11.8 4.0 0.34 11.2 4.0 1.3 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein Thioredoxin PF00085.20 ORF7737 - 1.6e-20 73.0 0.0 2.9e-20 72.2 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 ORF7737 - 0.0022 18.4 0.0 0.0049 17.3 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 ORF7737 - 0.18 11.1 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family adh_short PF00106.25 ORF73895 - 0.00063 19.3 3.7 0.001 18.6 3.7 1.2 1 0 0 1 1 1 1 short chain dehydrogenase OSR1_C PF12202.8 ORF73895 - 0.0045 17.2 10.2 8.4 6.7 0.4 4.8 3 1 2 5 5 5 3 Oxidative-stress-responsive kinase 1 C-terminal domain DUF2590 PF10761.9 ORF73895 - 0.3 11.3 5.5 0.39 10.9 0.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2590) DUF4844 PF16133.5 ORF73895 - 0.35 11.4 3.5 1.1 9.8 0.3 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4844) MatP_C PF17414.2 ORF7269 - 0.031 14.5 0.2 0.067 13.4 0.2 1.5 1 0 0 1 1 1 0 MatP C-terminal ribbon-helix-helix domain Phage_CP76 PF06892.11 ORF7269 - 0.033 13.7 0.1 0.071 12.6 0.1 1.6 1 1 0 1 1 1 0 Phage regulatory protein CII (CP76) L27_1 PF09058.10 ORF7269 - 0.11 12.5 0.4 0.23 11.4 0.4 1.4 1 0 0 1 1 1 0 L27_1 CUE PF02845.16 ORF68533 - 4.3e-06 26.3 0.0 7.6e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 CUE domain CmlA_N PF18456.1 ORF68533 - 0.018 14.3 0.2 0.025 13.9 0.2 1.3 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain FAM72 PF14976.6 ORF68533 - 0.067 13.3 0.0 0.21 11.8 0.0 1.8 1 0 0 1 1 1 0 FAM72 protein CDC45 PF02724.14 ORF68533 - 0.82 7.9 9.8 0.72 8.1 9.8 1.1 1 0 0 1 1 1 0 CDC45-like protein MatE PF01554.18 ORF67930 - 6e-12 45.5 4.8 1e-11 44.8 4.8 1.4 1 1 0 1 1 1 1 MatE CxC2 PF18803.1 ORF66538 - 0.038 14.1 3.2 1.9 8.7 0.1 2.7 1 1 2 3 3 3 0 CxC2 like cysteine cluster associated with KDZ transposases PTPS PF01242.19 ORF66538 - 0.08 12.9 0.7 0.15 12.1 0.7 1.3 1 0 0 1 1 1 0 6-pyruvoyl tetrahydropterin synthase DUF4064 PF13273.6 ORF65042 - 0.0053 17.0 4.5 1.6 9.1 0.1 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF4064) PBP1_TM PF14812.6 ORF65042 - 0.027 14.8 0.0 0.057 13.8 0.0 1.5 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF4611 PF15387.6 ORF65042 - 0.39 11.0 4.9 0.43 10.8 2.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4611) YMF19 PF02326.15 ORF65042 - 0.39 11.5 4.3 7.9 7.3 0.0 2.6 2 1 0 2 2 2 0 Plant ATP synthase F0 Orf78 PF06024.12 ORF65042 - 6.3 7.2 7.3 0.32 11.3 1.1 2.1 2 1 0 2 2 2 0 Orf78 (ac78) zf-C2H2 PF00096.26 ORF63832 - 5e-13 48.7 23.7 7.9e-07 29.2 2.6 3.9 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 ORF63832 - 3.9e-10 39.7 19.3 5.1e-05 23.8 1.1 4.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 ORF63832 - 1.1e-07 31.9 23.0 4.1e-05 23.8 0.3 4.8 4 1 0 4 4 4 2 Zinc-finger double domain zf-H2C2_5 PF13909.6 ORF63832 - 0.0033 17.2 2.7 0.0033 17.2 2.7 4.1 4 1 0 4 4 4 1 C2H2-type zinc-finger domain zf-MYST PF17772.1 ORF63832 - 0.016 14.8 0.6 0.016 14.8 0.6 2.9 4 0 0 4 4 4 0 MYST family zinc finger domain zf-C2H2_6 PF13912.6 ORF63832 - 0.026 14.5 0.3 0.026 14.5 0.3 3.9 3 0 0 3 3 3 0 C2H2-type zinc finger zf-Di19 PF05605.12 ORF63832 - 0.03 14.6 1.8 0.03 14.6 1.8 2.9 1 1 2 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding zf-C2HC_2 PF13913.6 ORF63832 - 0.2 11.6 6.0 1.2 9.2 0.4 3.0 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-C2H2_3rep PF18868.1 ORF63832 - 0.83 10.3 7.1 0.95 10.2 1.0 2.6 1 1 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats DNA_topoisoIV PF00521.20 ORF63316 - 9.5e-25 87.4 4.0 1.1e-24 87.1 4.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A PdaC PF13739.6 ORF63316 - 2.5 9.2 5.7 2.2 9.3 4.3 1.7 1 1 0 1 1 1 0 Deacetylase PdaC Thioredoxin_4 PF13462.6 ORF62347 - 1e-08 35.5 0.0 2.5e-08 34.2 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin DSBA PF01323.20 ORF62347 - 0.00013 21.8 0.1 0.17 11.6 0.0 2.1 1 1 0 2 2 2 2 DSBA-like thioredoxin domain Fer2_3 PF13085.6 ORF62347 - 0.014 15.4 0.0 0.027 14.5 0.0 1.5 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain MORN PF02493.20 ORF57905 - 2.9e-07 30.0 2.2 0.01 15.7 0.1 3.2 3 0 0 3 3 3 2 MORN repeat Holin_BlyA PF05102.12 ORF57759 - 0.5 10.4 5.2 2 8.5 0.3 2.5 2 0 0 2 2 2 0 holin, BlyA family DUF4734 PF15881.5 ORF577 - 0.098 12.8 0.2 0.17 12.1 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4734) COPI_C PF06957.11 ORF577 - 0.14 10.9 0.0 0.19 10.4 0.0 1.1 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus Colicin PF01024.19 ORF54951 - 0.013 15.4 7.4 0.013 15.4 7.4 1.6 1 1 1 2 2 2 0 Colicin pore forming domain TPD PF14811.6 ORF54951 - 0.26 11.1 5.7 4.1 7.3 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function TPD sequence-motif KLRAQ PF10205.9 ORF5462 - 0.0013 19.0 0.6 0.003 17.8 0.6 1.6 1 0 0 1 1 1 1 Predicted coiled-coil domain-containing protein DUF1283 PF06932.11 ORF5462 - 0.19 11.9 0.2 0.19 11.9 0.2 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1283) Ribonuc_L-PSP PF01042.21 ORF53079 - 7.8e-13 48.5 0.0 4.7e-05 23.4 0.0 2.2 2 0 0 2 2 2 2 Endoribonuclease L-PSP T2SSJ PF11612.8 ORF49101 - 0.077 13.2 0.0 1.6 8.9 0.0 2.1 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein J MFS_1 PF07690.16 ORF48863 - 2.3e-07 30.1 11.3 2.3e-07 30.1 11.3 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF4816 PF16086.5 ORF4698 - 0.014 15.3 7.8 0.027 14.4 7.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4816) CagY_M PF07337.11 ORF44822 - 0.034 13.8 0.0 0.055 13.1 0.0 1.3 1 0 0 1 1 1 0 DC-EC Repeat GP17 PF17420.2 ORF44579 - 0.033 14.3 1.5 0.059 13.5 1.5 1.4 1 0 0 1 1 1 0 Superinfection exclusion gene product 17 EPF PF17181.4 ORF43814 - 0.07 13.1 4.5 0.24 11.4 4.5 2.0 1 1 0 1 1 1 0 Epidermal patterning factor proteins NAD_binding_10 PF13460.6 ORF41438 - 2.4e-17 63.4 0.0 3e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 ORF41438 - 0.014 14.9 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 NmrA-like family GyrI-like PF06445.15 ORF40633 - 0.0049 17.2 0.2 0.0064 16.8 0.2 1.3 1 0 0 1 1 1 1 GyrI-like small molecule binding domain SIR4_SID PF16991.5 ORF40633 - 0.041 14.0 0.3 2.8 8.0 0.0 2.2 2 0 0 2 2 2 0 Sir4 SID domain MID_MedPIWI PF18296.1 ORF40633 - 0.089 12.6 0.3 3.9 7.2 0.1 2.0 1 1 1 2 2 2 0 MID domain of medPIWI zf-Paramyx-P PF13008.7 ORF38413 - 0.015 14.8 0.3 0.078 12.5 0.3 2.3 1 0 0 1 1 1 0 Zinc-binding domain of Paramyxoviridae V protein Aldo_ket_red PF00248.21 ORF38232 - 3.9e-40 137.9 0.0 4.5e-39 134.4 0.0 1.9 1 1 0 1 1 1 1 Aldo/keto reductase family Auxin_canalis PF05703.11 ORF38221 - 0.081 12.9 3.5 0.087 12.7 2.9 1.3 1 1 0 1 1 1 0 Auxin canalisation DUF591 PF04569.14 ORF30786 - 0.6 10.2 0.1 0.6 10.2 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function DUF4116 PF13475.6 ORF3007 - 1.1e-20 73.1 0.0 3.1e-10 39.6 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF4116) U-box PF04564.15 ORF29298 - 1.1e-10 41.6 0.0 4.6e-09 36.3 0.0 2.6 3 0 0 3 3 3 1 U-box domain Phage_portal PF04860.12 ORF29298 - 0.018 14.2 0.2 0.024 13.8 0.2 1.3 1 0 0 1 1 1 0 Phage portal protein SWI-SNF_Ssr4 PF08549.10 ORF29298 - 0.053 12.2 0.4 0.052 12.2 0.4 1.0 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) p450 PF00067.22 ORF28175 - 5.6e-39 134.2 0.0 6.2e-39 134.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Coa1 PF08695.10 ORF28175 - 0.013 15.2 0.0 0.023 14.4 0.0 1.3 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 Holin_BlyA PF05102.12 ORF25387 - 0.5 10.4 5.2 2 8.5 0.3 2.5 2 0 0 2 2 2 0 holin, BlyA family RebB PF11747.8 ORF24687 - 0.025 14.7 0.0 0.04 14.0 0.0 1.2 1 0 0 1 1 1 0 Killing trait B9-C2 PF07162.11 ORF24642 - 4.7e-43 147.3 0.0 5.7e-43 147.0 0.0 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein DUF1298 PF06974.13 ORF22912 - 0.011 15.7 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1298) RepB-RCR_reg PF10723.9 ORF22912 - 0.027 14.4 0.0 0.061 13.3 0.0 1.5 1 0 0 1 1 1 0 Replication regulatory protein RepB Aldolase_II PF00596.21 ORF22787 - 2.6e-47 161.2 0.3 3.2e-47 160.9 0.3 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Ribophorin_I PF04597.14 ORF22787 - 0.0034 16.6 0.0 0.0062 15.8 0.0 1.3 1 0 0 1 1 1 1 Ribophorin I Glyco_transf_4 PF13439.6 ORF22787 - 0.11 12.5 0.7 0.38 10.7 0.1 2.0 2 0 0 2 2 2 0 Glycosyltransferase Family 4 cobW PF02492.19 ORF22787 - 0.21 11.1 0.0 0.69 9.5 0.0 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Abhydrolase_2 PF02230.16 ORF149947 - 3.9e-12 46.4 0.0 5.7e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_6 PF12697.7 ORF149947 - 0.021 15.4 0.3 0.058 14.0 0.2 1.8 1 1 0 1 1 1 0 Alpha/beta hydrolase family DUF4417 PF14386.6 ORF149947 - 0.14 11.8 0.0 0.44 10.1 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4417) Abhydrolase_3 PF07859.13 ORF149947 - 0.18 11.6 0.0 0.25 11.1 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Tim17 PF02466.19 ORF14984 - 2.5e-07 31.1 0.0 4.1e-07 30.4 0.0 1.4 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Sedlin_N PF04628.13 ORF14984 - 0.026 14.7 0.4 0.095 12.8 0.4 1.9 1 1 0 1 1 1 0 Sedlin, N-terminal conserved region TFIID-31kDa PF02291.15 ORF149371 - 4e-18 65.7 0.6 6.6e-18 64.9 0.6 1.3 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit Mre11_DNA_bind PF04152.14 ORF149371 - 0.042 14.2 0.2 0.042 14.2 0.2 2.1 2 0 0 2 2 2 0 Mre11 DNA-binding presumed domain Cyclophil_like PF04126.13 ORF149371 - 0.14 12.0 0.0 2.8 7.8 0.0 2.1 2 0 0 2 2 2 0 Cyclophilin-like Tmemb_9 PF05434.11 ORF148714 - 0.19 11.6 0.1 0.19 11.6 0.1 1.9 2 0 0 2 2 2 0 TMEM9 Vpu PF00558.19 ORF148714 - 6.6 6.6 7.3 1.8 8.4 3.2 2.0 2 0 0 2 2 2 0 Vpu protein NAD_binding_10 PF13460.6 ORF147608 - 2.3e-13 50.4 0.0 3.3e-13 49.9 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 ORF147608 - 5.8e-06 26.7 0.0 1.5e-05 25.4 0.0 1.7 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_4 PF07993.12 ORF147608 - 0.00015 21.0 0.0 0.0071 15.5 0.0 2.2 2 0 0 2 2 2 1 Male sterility protein 3Beta_HSD PF01073.19 ORF147608 - 0.00022 20.3 0.0 0.00032 19.8 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NmrA PF05368.13 ORF147608 - 0.00077 19.1 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 ORF147608 - 0.00089 18.8 0.0 0.0012 18.3 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family HIM1 PF08732.10 ORF147608 - 0.0037 16.8 0.0 0.0053 16.3 0.0 1.2 1 0 0 1 1 1 1 HIM1 DapB_N PF01113.20 ORF147608 - 0.029 14.5 0.0 0.037 14.1 0.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus TrbH PF07283.11 ORF145488 - 0.14 12.4 0.0 0.2 11.8 0.0 1.3 1 0 0 1 1 1 0 Conjugal transfer protein TrbH Methyltransf_24 PF13578.6 ORF140534 - 8.4e-15 55.7 0.1 1.2e-14 55.2 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Polysacc_synt PF01943.17 ORF139963 - 0.00046 19.6 1.0 0.00046 19.6 1.0 1.5 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein TIR_2 PF13676.6 ORF139963 - 0.0029 18.2 0.0 0.0049 17.5 0.0 1.3 1 0 0 1 1 1 1 TIR domain HET PF06985.11 ORF139963 - 0.59 10.5 1.6 1.5 9.2 0.0 2.0 1 1 1 2 2 2 0 Heterokaryon incompatibility protein (HET) SNF5 PF04855.12 ORF139832 - 0.0029 17.4 0.8 0.01 15.6 0.0 2.1 2 0 0 2 2 2 1 SNF5 / SMARCB1 / INI1 Mem_trans PF03547.18 ORF139832 - 0.42 8.9 2.7 0.51 8.7 2.7 1.1 1 0 0 1 1 1 0 Membrane transport protein SAS-6_N PF16531.5 ORF139347 - 9e-29 99.9 0.9 1.7e-28 99.1 0.9 1.5 1 0 0 1 1 1 1 Centriolar protein SAS N-terminal PCI PF01399.27 ORF139267 - 8.6e-09 35.9 2.8 8.6e-09 35.9 2.8 2.1 2 1 0 2 2 2 1 PCI domain HAUS-augmin3 PF14932.6 ORF139267 - 0.35 10.4 9.8 0.09 12.3 2.7 2.2 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Ubiq_cyt_C_chap PF03981.12 ORF139267 - 0.6 10.2 4.4 7.7 6.6 0.2 2.3 2 0 0 2 2 2 0 Ubiquinol-cytochrome C chaperone NINJA_B PF16136.5 ORF13864 - 0.11 12.8 2.1 0.82 10.1 0.2 2.2 2 0 0 2 2 2 0 Putative nuclear localisation signal Auxin_canalis PF05703.11 ORF137691 - 0.081 12.9 3.5 0.087 12.7 2.9 1.3 1 1 0 1 1 1 0 Auxin canalisation MORN PF02493.20 ORF134410 - 2.6e-22 77.3 47.8 9.2e-07 28.4 4.5 6.9 7 0 0 7 7 7 5 MORN repeat DUF3048_C PF17479.2 ORF134410 - 0.012 16.0 9.2 0.066 13.6 1.0 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain Zap1_zf2 PF18217.1 ORF134410 - 0.1 12.6 1.7 0.63 10.1 0.3 2.5 2 0 0 2 2 2 0 Zap1 zinc finger 2 DUF2878 PF11086.8 ORF134067 - 0.0071 16.6 1.7 0.0071 16.6 1.7 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2878) FAM209 PF15206.6 ORF134067 - 0.02 14.7 0.0 0.038 13.8 0.0 1.5 1 0 0 1 1 1 0 FAM209 family Ribosomal_S27 PF01599.19 ORF134067 - 0.055 13.6 0.0 0.13 12.5 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein S27a START PF01852.19 ORF131892 - 2.3e-09 37.0 0.0 3e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 START domain FlgO PF17680.1 ORF131892 - 0.11 12.2 0.0 0.26 11.0 0.0 1.6 2 0 0 2 2 2 0 FlgO protein AMPK1_CBM PF16561.5 ORF13076 - 1.2e-14 54.3 0.7 1.8e-14 53.7 0.7 1.3 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase CBM_48 PF02922.18 ORF13076 - 0.00023 21.5 0.2 0.00049 20.4 0.2 1.5 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Glycos_transf_1 PF00534.20 ORF13076 - 0.00078 19.0 0.0 0.0012 18.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 CBM53 PF16760.5 ORF13076 - 0.03 14.9 0.7 0.1 13.2 0.3 2.0 2 0 0 2 2 2 0 Starch/carbohydrate-binding module (family 53) Lipase_GDSL_2 PF13472.6 ORF130145 - 9.7e-07 29.3 0.0 1.3e-06 28.9 0.0 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family PGP_phosphatase PF09419.10 ORF128793 - 0.057 13.0 0.0 0.094 12.3 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase I-EGF_1 PF18372.1 ORF128793 - 0.099 12.8 0.1 1.8 8.7 0.0 2.3 2 0 0 2 2 2 0 Integrin beta epidermal growth factor like domain 1 Mod_r PF07200.13 ORF12842 - 3.1e-13 50.1 13.5 4e-13 49.7 13.5 1.1 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein Piezo_RRas_bdg PF12166.8 ORF12842 - 0.0047 16.3 1.7 0.0058 16.0 1.7 1.0 1 0 0 1 1 1 1 Piezo non-specific cation channel, R-Ras-binding domain Muted PF14942.6 ORF12842 - 0.22 11.8 4.0 0.34 11.2 4.0 1.3 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein PGP_phosphatase PF09419.10 ORF12818 - 0.057 13.0 0.0 0.094 12.3 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial PGP phosphatase I-EGF_1 PF18372.1 ORF12818 - 0.099 12.8 0.1 1.8 8.7 0.0 2.3 2 0 0 2 2 2 0 Integrin beta epidermal growth factor like domain 1 Melibiase_2 PF16499.5 ORF127709 - 0.0022 17.2 0.0 0.0033 16.7 0.0 1.3 1 0 0 1 1 1 1 Alpha galactosidase A Pkinase_Tyr PF07714.17 ORF127038 - 2.9e-45 154.6 0.0 3.3e-45 154.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 ORF127038 - 2.5e-36 125.4 0.0 3e-36 125.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 ORF127038 - 0.03 13.1 0.0 0.038 12.8 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 ORF127038 - 0.073 13.0 0.0 0.094 12.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Phage_tail_NK PF16532.5 ORF126784 - 0.41 10.3 1.5 8.3 6.0 0.2 2.6 2 1 1 3 3 3 0 Sf6-type phage tail needle knob or tip of some Caudovirales STI1 PF17830.1 ORF125325 - 0.027 14.4 3.7 0.027 14.4 3.7 2.9 2 1 1 3 3 3 0 STI1 domain PCRF PF03462.18 ORF125325 - 0.94 9.3 7.6 1.2 9.0 7.0 1.5 1 1 1 2 2 2 0 PCRF domain Com_YlbF PF06133.11 ORF125325 - 5.3 7.7 12.8 0.97 10.1 5.1 2.1 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA DGF-1_C PF11040.8 ORF125269 - 0.14 12.1 0.3 0.38 10.8 0.1 1.8 1 1 1 2 2 2 0 Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus MORN PF02493.20 ORF122229 - 5.4e-22 76.3 41.1 2.2e-06 27.2 2.5 7.2 7 0 0 7 7 7 5 MORN repeat Tudor_2 PF18104.1 ORF122229 - 6.3 6.6 7.2 8.4 6.2 0.1 3.8 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain ADP_PFK_GK PF04587.15 ORF117345 - 1.3e-18 66.8 0.0 1.6e-18 66.5 0.0 1.0 1 0 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region AP2 PF00847.20 ORF115041 - 0.13 12.5 0.0 0.33 11.2 0.0 1.7 1 0 0 1 1 1 0 AP2 domain SepSecS PF05889.13 ORF111888 - 6.9e-44 150.1 0.0 8.3e-44 149.8 0.0 1.1 1 0 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Beta_elim_lyase PF01212.21 ORF111888 - 0.031 13.5 0.0 0.044 13.1 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase Hydrolase_4 PF12146.8 ORF111510 - 2.3e-08 33.6 0.0 2.9e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 ORF111510 - 2e-05 24.4 0.1 0.037 13.7 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold DUF915 PF06028.11 ORF111510 - 0.0074 15.7 0.1 0.015 14.6 0.1 1.5 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF915) DUF900 PF05990.12 ORF111510 - 0.0085 15.6 0.0 0.024 14.1 0.0 1.7 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_6 PF12697.7 ORF111510 - 0.038 14.6 0.0 0.047 14.3 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family ABC-3 PF00950.17 ORF111510 - 0.1 12.1 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 ABC 3 transport family ATG27 PF09451.10 ORF109491 - 0.0032 17.4 0.0 0.0043 17.0 0.0 1.2 1 0 0 1 1 1 1 Autophagy-related protein 27 Apolipoprotein PF01442.18 ORF109491 - 0.029 14.3 1.4 0.11 12.4 1.4 2.1 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain MDMPI_N PF11716.8 ORF109491 - 0.11 13.2 1.5 0.21 12.3 1.5 1.5 1 0 0 1 1 1 0 Mycothiol maleylpyruvate isomerase N-terminal domain Virul_fac_BrkB PF03631.15 ORF109491 - 0.11 12.0 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 Virulence factor BrkB Kelch_5 PF13854.6 ORF106457 - 1.5e-26 91.9 0.2 5.3e-08 32.7 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_4 PF13418.6 ORF106457 - 2.4e-26 91.5 0.3 5.5e-07 29.5 0.0 4.2 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF106457 - 5.4e-23 80.3 0.0 8.8e-07 28.4 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_6 PF13964.6 ORF106457 - 2.9e-20 71.8 0.5 6.1e-06 26.3 0.0 4.1 3 1 1 4 4 4 3 Kelch motif Kelch_3 PF13415.6 ORF106457 - 1.9e-19 69.4 0.0 1.7e-06 28.2 0.0 5.0 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_2 PF07646.15 ORF106457 - 2.5e-18 65.2 0.1 5.7e-05 22.9 0.0 4.2 4 0 0 4 4 4 3 Kelch motif MORN PF02493.20 ORF101189 - 3.6e-26 89.4 45.0 2.4e-08 33.4 3.8 7.1 8 0 0 8 8 8 5 MORN repeat DUF3048_C PF17479.2 ORF101189 - 0.025 15.0 14.3 0.18 12.2 2.4 3.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain DUF1659 PF07872.11 ORF101189 - 0.41 10.4 4.3 0.33 10.7 0.5 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1659) START PF01852.19 ORF100441 - 4.3e-11 42.6 0.0 5.4e-11 42.3 0.0 1.1 1 0 0 1 1 1 1 START domain Ntox28 PF15605.6 ORF100441 - 0.027 14.7 0.0 0.076 13.3 0.0 1.7 2 0 0 2 2 2 0 Bacterial toxin 28 FlbD PF06289.11 ORF100441 - 1.3 8.7 6.7 11 5.7 0.1 3.3 3 1 1 4 4 4 0 Flagellar and Swarming motility proteins zf_CCCH_4 PF18345.1 NODE_32047_length_679_cov_298.698758_g24785_i1forward_frame_1 - 1e-08 34.9 11.9 7.8e-07 28.9 1.4 3.2 3 0 0 3 3 3 2 Zinc finger domain zf-CCCH PF00642.24 NODE_32047_length_679_cov_298.698758_g24785_i1forward_frame_1 - 3.8e-08 33.0 5.7 2.5e-06 27.3 0.1 2.9 2 1 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 NODE_32047_length_679_cov_298.698758_g24785_i1forward_frame_1 - 5.2e-06 26.7 0.5 0.024 15.1 0.0 2.4 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger zf-CCCH_4 PF18044.1 NODE_32047_length_679_cov_298.698758_g24785_i1forward_frame_1 - 8.1e-06 25.5 4.2 0.00054 19.7 0.2 2.9 3 0 0 3 3 3 2 CCCH-type zinc finger Torus PF16131.5 NODE_32047_length_679_cov_298.698758_g24785_i1forward_frame_1 - 3.7e-05 24.4 2.7 0.0058 17.3 0.1 2.2 1 1 1 2 2 2 2 Torus domain zf-CCCH_3 PF15663.5 NODE_32047_length_679_cov_298.698758_g24785_i1forward_frame_1 - 0.00014 22.1 5.4 0.079 13.2 0.3 2.3 2 0 0 2 2 2 2 Zinc-finger containing family MARVEL PF01284.23 NODE_32031_length_680_cov_2.204651_g25404_i0forward_frame_1 - 0.078 13.0 0.1 0.1 12.6 0.1 1.2 1 0 0 1 1 1 0 Membrane-associating domain PK PF00224.21 NODE_32029_length_680_cov_2.998450_g25402_i0reverse_frame_1 - 6.1e-59 199.6 0.0 7.1e-59 199.4 0.0 1.0 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain IMPDH PF00478.25 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 1.6e-100 336.5 12.9 1.8e-100 336.4 12.9 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 2.1e-09 36.9 6.3 4e-09 36.0 6.3 1.5 1 0 0 1 1 1 1 FMN-dependent dehydrogenase NMO PF03060.15 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 7.4e-08 32.2 6.2 1e-07 31.7 6.2 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.21 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.00011 21.8 5.2 0.0031 17.0 5.2 2.5 1 1 0 1 1 1 1 Histidine biosynthesis protein Glu_synthase PF01645.17 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.00065 18.9 6.4 0.00065 18.9 6.4 1.5 2 0 0 2 2 2 1 Conserved region in glutamate synthase ThiG PF05690.14 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.00087 18.7 7.5 0.00087 18.7 7.5 1.6 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.001 18.4 3.6 0.001 18.4 3.6 1.6 1 1 0 1 1 1 1 Thiamine monophosphate synthase DHO_dh PF01180.21 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.0011 18.2 9.0 0.0014 17.9 2.8 2.1 1 1 1 2 2 2 1 Dihydroorotate dehydrogenase NanE PF04131.14 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.0017 17.6 5.2 0.0093 15.2 5.2 2.4 1 1 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase Aldolase PF01081.19 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.015 14.7 2.8 0.033 13.6 1.0 2.0 1 1 1 2 2 2 0 KDPG and KHG aldolase PK PF00224.21 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.071 12.0 0.2 0.25 10.2 0.0 1.8 2 0 0 2 2 2 0 Pyruvate kinase, barrel domain G3P_antiterm PF04309.12 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.076 12.4 2.2 0.14 11.6 0.4 2.0 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator IGPS PF00218.21 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.11 11.6 0.2 0.94 8.6 0.0 2.1 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase Trp_syntA PF00290.20 NODE_32028_length_680_cov_3.578295_g25401_i0forward_frame_1 - 0.2 10.5 1.4 0.22 10.3 0.3 1.6 2 0 0 2 2 2 0 Tryptophan synthase alpha chain Rrn6 PF10214.9 NODE_32023_length_680_cov_51.186047_g25396_i0forward_frame_1 - 0.76 8.2 16.0 0.91 7.9 16.0 1.1 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF805 PF05656.14 NODE_32004_length_680_cov_124.522481_g25378_i0reverse_frame_1 - 3.8 8.0 12.8 0.56 10.6 3.8 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF805) CrgA PF06781.12 NODE_32004_length_680_cov_124.522481_g25378_i0reverse_frame_1 - 4.4 7.4 6.4 0.73 9.9 2.0 1.9 1 1 1 2 2 2 0 Cell division protein CrgA Dna2 PF08696.11 NODE_31984_length_680_cov_3500.838760_g720_i7reverse_frame_1 - 0.016 15.0 2.7 0.044 13.6 2.7 1.7 1 1 0 1 1 1 0 DNA replication factor Dna2 Pro_sub2 PF18513.1 NODE_31984_length_680_cov_3500.838760_g720_i7reverse_frame_1 - 0.023 14.8 0.6 0.023 14.8 0.6 1.9 2 0 0 2 2 2 0 Prodomain subtilisin 2 RNA_pol_A_CTD PF03118.15 NODE_31984_length_680_cov_3500.838760_g720_i7forward_frame_1 - 0.076 12.8 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain RNA_pol_A_CTD PF03118.15 NODE_31982_length_680_cov_3792.114729_g720_i6reverse_frame_1 - 0.076 12.8 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial RNA polymerase, alpha chain C terminal domain Dna2 PF08696.11 NODE_31982_length_680_cov_3792.114729_g720_i6forward_frame_1 - 0.016 15.0 2.7 0.044 13.6 2.7 1.7 1 1 0 1 1 1 0 DNA replication factor Dna2 Pro_sub2 PF18513.1 NODE_31982_length_680_cov_3792.114729_g720_i6forward_frame_1 - 0.023 14.8 0.6 0.023 14.8 0.6 1.9 2 0 0 2 2 2 0 Prodomain subtilisin 2 RAP PF08373.10 NODE_31972_length_681_cov_129.849845_g25353_i0reverse_frame_1 - 4.7e-09 36.2 0.0 1e-08 35.1 0.0 1.6 1 0 0 1 1 1 1 RAP domain SOBP PF15279.6 NODE_31972_length_681_cov_129.849845_g25353_i0reverse_frame_1 - 0.088 13.4 0.8 0.17 12.5 0.7 1.7 1 1 0 1 1 1 0 Sine oculis-binding protein Molybdopterin PF00384.22 NODE_31939_length_682_cov_3.690881_g25331_i0reverse_frame_3 - 5e-29 101.5 0.1 6.6e-29 101.1 0.1 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase DNA_pol_A_exo1 PF01612.20 NODE_31926_length_682_cov_103.474498_g18441_i1reverse_frame_2 - 2.1e-10 40.6 0.0 7.5e-10 38.8 0.0 1.7 1 1 0 1 1 1 1 3'-5' exonuclease Mito_fiss_reg PF05308.11 NODE_31916_length_682_cov_207.238022_g25310_i0reverse_frame_3 - 2.5 8.1 10.5 0.54 10.3 6.6 1.8 2 1 0 2 2 2 0 Mitochondrial fission regulator MIB_HERC2 PF06701.13 NODE_31865_length_683_cov_193.007716_g21924_i1forward_frame_3 - 1.1e-18 67.2 1.5 2.2e-18 66.2 1.5 1.5 1 0 0 1 1 1 1 Mib_herc2 SEEK1 PF15357.6 NODE_31828_length_684_cov_22.531587_g25241_i0reverse_frame_3 - 0.07 13.3 0.0 0.1 12.8 0.0 1.2 1 0 0 1 1 1 0 Psoriasis susceptibility 1 candidate 1 UCH PF00443.29 NODE_31828_length_684_cov_22.531587_g25241_i0reverse_frame_2 - 8.4e-15 54.9 4.2 8.4e-15 54.9 4.2 1.5 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase TMF_DNA_bd PF12329.8 NODE_31828_length_684_cov_22.531587_g25241_i0reverse_frame_2 - 9.2 6.4 12.4 0.59 10.2 0.3 3.2 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF3510 PF12022.8 NODE_31827_length_684_cov_22.662558_g25240_i0reverse_frame_3 - 0.006 17.0 1.9 0.01 16.2 1.9 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF3510) DUF5635 PF18685.1 NODE_31822_length_684_cov_91.006163_g25236_i0reverse_frame_2 - 0.15 12.0 0.1 0.65 10.0 0.1 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5635) DUF4116 PF13475.6 NODE_31822_length_684_cov_91.006163_g25236_i0forward_frame_3 - 3.1e-27 94.0 0.0 7.4e-13 48.0 0.0 3.7 4 0 0 4 4 4 3 Domain of unknown function (DUF4116) FGFR3_TM PF18123.1 NODE_31813_length_684_cov_167.375963_g25227_i0reverse_frame_2 - 2.2 7.9 7.9 3.8 7.1 0.9 2.7 2 0 0 2 2 2 0 Fibroblast growth factor receptor 3 transmembrane domain MyTH4 PF00784.17 NODE_31813_length_684_cov_167.375963_g25227_i0forward_frame_2 - 0.00099 19.6 5.7 0.44 11.1 0.3 2.6 1 1 1 3 3 3 2 MyTH4 domain TINF2_N PF14973.6 ORF99702 - 0.045 14.1 3.5 0.072 13.4 3.5 1.3 1 0 0 1 1 1 0 TERF1-interacting nuclear factor 2 N-terminus DUF87 PF01935.17 ORF99702 - 0.2 11.7 5.2 0.28 11.3 5.2 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain DUF724 PF05266.14 ORF99702 - 0.33 10.8 9.6 0.48 10.2 9.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Herpes_UL6 PF01763.16 ORF99702 - 0.81 8.1 6.6 1.1 7.7 6.6 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like DUF4164 PF13747.6 ORF99702 - 1.3 9.3 10.6 0.38 11.1 5.8 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) DUF1664 PF07889.12 ORF99702 - 2 8.5 7.6 0.4 10.7 4.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) START PF01852.19 ORF98158 - 2e-09 37.2 0.0 2.3e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 START domain Ntox28 PF15605.6 ORF98158 - 0.14 12.4 0.0 0.35 11.1 0.0 1.7 1 0 0 1 1 1 0 Bacterial toxin 28 RCC1_2 PF13540.6 ORF97334 - 2e-11 43.4 12.4 0.13 12.1 0.1 5.3 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 ORF97334 - 2.6e-05 24.4 4.4 3.9 7.5 0.0 4.9 2 2 1 3 3 3 2 Uncharacterised ACR, YagE family COG1723 Spectrin PF00435.21 ORF97334 - 0.00018 21.9 1.2 24 5.5 0.0 5.0 4 2 1 5 5 5 1 Spectrin repeat FtsQ PF03799.15 ORF97334 - 0.0002 22.2 0.1 5.4 7.9 0.0 4.0 1 1 4 5 5 5 1 Cell division protein FtsQ SIS_2 PF13580.6 ORF97334 - 3.3 7.7 9.9 8.5 6.4 0.2 4.1 1 1 4 5 5 5 0 SIS domain Methyltransf_25 PF13649.6 ORF97269 - 3.9e-13 49.9 0.0 1e-12 48.6 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF97269 - 6.5e-12 45.5 0.0 1e-11 44.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF97269 - 1.2e-10 41.5 0.0 1.5e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF97269 - 2e-09 37.9 0.0 4.3e-09 36.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF97269 - 1.7e-08 35.1 0.0 3.7e-08 34.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF97269 - 1.8e-06 27.5 0.0 2.7e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF97269 - 0.0002 21.3 0.0 0.00039 20.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF97269 - 0.00021 20.9 0.0 0.00037 20.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF97269 - 0.00031 20.8 0.0 0.00056 19.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF97269 - 0.0013 18.4 0.0 0.0031 17.1 0.0 1.6 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW CMAS PF02353.20 ORF97269 - 0.003 16.9 0.0 0.0081 15.5 0.0 1.7 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.11 ORF97269 - 0.0041 16.1 0.0 0.0072 15.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) RrnaAD PF00398.20 ORF97269 - 0.0062 15.6 0.0 0.011 14.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase AdoMet_MTase PF07757.13 ORF97269 - 0.0068 16.7 0.2 0.084 13.2 0.1 2.4 1 1 0 2 2 2 1 Predicted AdoMet-dependent methyltransferase PrmA PF06325.13 ORF97269 - 0.015 14.7 0.0 0.024 14.1 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DOT1 PF08123.13 ORF97269 - 0.017 14.7 0.0 0.027 14.0 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 PCMT PF01135.19 ORF97269 - 0.051 13.3 0.0 0.091 12.5 0.0 1.4 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N6_N4_Mtase PF01555.18 ORF97269 - 0.074 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 DNA methylase His_Phos_2 PF00328.22 ORF97269 - 0.081 12.3 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) TrkA_N PF02254.18 ORF97269 - 0.13 12.5 0.0 0.28 11.5 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain Molybdop_Fe4S4 PF04879.16 ORF96685 - 0.063 13.3 1.2 0.56 10.2 1.4 2.3 2 1 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain SWIM PF04434.17 ORF94253 - 7.2 6.4 9.3 1.7 8.4 2.5 2.4 2 0 0 2 2 2 0 SWIM zinc finger Abhydrolase_2 PF02230.16 ORF90562 - 8.3e-36 123.8 0.0 1.1e-35 123.4 0.0 1.2 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Esterase PF00756.20 ORF90562 - 2.9e-05 23.9 0.0 4e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 ORF90562 - 9.2e-05 21.8 0.1 0.0032 16.8 0.1 2.3 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 ORF90562 - 0.00012 22.8 1.9 0.00022 21.9 2.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 ORF90562 - 0.00014 21.5 0.0 0.00018 21.1 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Esterase_phd PF10503.9 ORF90562 - 0.0014 18.1 0.1 0.0025 17.3 0.1 1.4 1 0 0 1 1 1 1 Esterase PHB depolymerase Lipase_3 PF01764.25 ORF90562 - 0.0039 17.0 0.0 0.0064 16.4 0.0 1.3 1 0 0 1 1 1 1 Lipase (class 3) FSH1 PF03959.13 ORF90562 - 0.01 15.5 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_1 PF00561.20 ORF90562 - 0.049 13.3 0.0 0.054 13.1 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Cutinase PF01083.22 ORF90562 - 0.091 12.7 0.1 0.27 11.2 0.0 1.7 2 0 0 2 2 2 0 Cutinase Peptidase_S9 PF00326.21 ORF90562 - 0.11 11.9 0.7 1.2 8.6 0.2 2.1 2 0 0 2 2 2 0 Prolyl oligopeptidase family DUF2974 PF11187.8 ORF90562 - 0.18 11.3 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) AXE1 PF05448.12 ORF90562 - 0.2 10.3 0.0 0.26 9.9 0.0 1.2 1 0 0 1 1 1 0 Acetyl xylan esterase (AXE1) FHA PF00498.26 ORF87219 - 1.6e-13 50.8 0.6 1.1e-12 48.2 0.0 2.3 2 0 0 2 2 2 1 FHA domain zf-C3HC4_3 PF13920.6 ORF87219 - 2.9e-11 43.0 6.3 4.7e-11 42.4 6.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Yop-YscD_cpl PF16697.5 ORF87219 - 4.1e-07 30.2 0.0 3.4e-06 27.3 0.0 2.2 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain Prok-RING_4 PF14447.6 ORF87219 - 1.4e-05 24.9 7.6 2.6e-05 24.0 7.6 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 ORF87219 - 4.2e-05 23.8 8.8 7.2e-05 23.0 8.8 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 ORF87219 - 0.001 18.9 10.3 0.0022 17.8 10.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 ORF87219 - 0.0012 18.6 8.6 0.0023 17.7 8.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_16 PF17034.5 ORF87219 - 0.0043 17.3 5.3 2.5 8.3 0.0 2.9 2 1 0 2 2 2 2 Zinc-ribbon like family zf-RING_5 PF14634.6 ORF87219 - 0.0046 16.9 9.6 0.0078 16.1 9.6 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF87219 - 0.12 12.6 6.9 1.4 9.1 7.5 2.2 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 ORF87219 - 3.5 7.7 10.3 0.22 11.6 3.3 2.2 2 0 0 2 2 2 0 RING-type zinc-finger Defensin_propep PF00879.18 ORF85373 - 0.035 14.4 0.3 0.083 13.2 0.1 1.6 2 0 0 2 2 2 0 Defensin propeptide Neuro_bHLH PF12533.8 ORF85135 - 0.091 13.9 0.0 0.16 13.2 0.0 1.3 1 0 0 1 1 1 0 Neuronal helix-loop-helix transcription factor Keratin_B2_2 PF13885.6 ORF84995 - 2.2 8.3 17.3 0.15 12.0 11.2 2.2 2 0 0 2 2 2 0 Keratin, high sulfur B2 protein NAD_binding_10 PF13460.6 ORF80376 - 3.1e-13 50.0 0.0 4e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 ORF80376 - 1.1e-07 32.4 0.0 4.5e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NmrA PF05368.13 ORF80376 - 2.5e-05 24.0 0.0 3.5e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 ORF80376 - 4.6e-05 22.6 0.0 5.9e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family HIM1 PF08732.10 ORF80376 - 0.00018 21.0 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 HIM1 Epimerase PF01370.21 ORF80376 - 0.00036 20.1 0.0 0.00051 19.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DapB_N PF01113.20 ORF80376 - 0.00092 19.3 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 ORF80376 - 0.0087 16.3 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Polysacc_synt_2 PF02719.15 ORF80376 - 0.049 12.8 0.0 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein BAH PF01426.18 ORF80376 - 0.15 11.9 0.2 0.24 11.2 0.2 1.3 1 0 0 1 1 1 0 BAH domain NAD_binding_4 PF07993.12 ORF80376 - 0.17 11.0 0.0 0.35 10.0 0.0 1.5 2 0 0 2 2 2 0 Male sterility protein CCD48 PF15799.5 ORF80280 - 0.85 7.9 11.0 1.2 7.4 11.0 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 48 MFS_1 PF07690.16 ORF80 - 1.7e-06 27.2 16.6 6.8e-06 25.2 15.7 1.9 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF2101 PF09874.9 ORF79825 - 0.053 13.2 0.0 0.072 12.8 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Ammonium_transp PF00909.21 ORF78494 - 1.3e-38 132.7 7.1 1.6e-38 132.4 7.1 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Glyco_hydro_3_C PF01915.22 ORF75695 - 9e-12 45.4 0.1 1.2e-11 44.9 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 3 C-terminal domain Fn3-like PF14310.6 ORF75695 - 8.8e-05 22.5 0.0 0.00019 21.5 0.0 1.5 1 0 0 1 1 1 1 Fibronectin type III-like domain Sgf11_N PF18519.1 ORF73968 - 0.086 12.4 0.6 0.14 11.7 0.1 1.5 2 0 0 2 2 2 0 SAGA-associated factor 11 N-terminal domain Activator_LAG-3 PF11498.8 ORF73141 - 0.00025 20.2 19.1 0.00032 19.8 19.1 1.3 1 0 0 1 1 1 1 Transcriptional activator LAG-3 TFIIA PF03153.13 ORF73141 - 0.13 12.2 16.5 0.19 11.7 16.5 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Beta-lactamase PF00144.24 ORF73141 - 0.13 11.5 1.4 0.18 11.0 1.4 1.2 1 0 0 1 1 1 0 Beta-lactamase DUF737 PF05300.11 ORF73141 - 0.27 11.6 9.4 0.39 11.0 9.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF737) DUF4199 PF13858.6 ORF73141 - 3.8 7.9 7.8 5.2 7.4 7.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) DUF945 PF06097.11 ORF73141 - 4 6.4 14.8 5 6.1 14.8 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF945) Cnd2 PF05786.14 ORF72795 - 1.1 7.9 14.0 1.4 7.5 14.0 1.2 1 0 0 1 1 1 0 Condensin complex subunit 2 SCAMP PF04144.13 ORF67344 - 2.5e-09 37.7 12.1 3.1e-09 37.4 12.1 1.0 1 0 0 1 1 1 1 SCAMP family Cnd2 PF05786.14 ORF66547 - 1.1 7.9 14.0 1.4 7.5 14.0 1.2 1 0 0 1 1 1 0 Condensin complex subunit 2 Chloroa_b-bind PF00504.21 ORF66133 - 9.8e-40 136.7 0.8 6.4e-31 108.1 0.0 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein Pentapeptide_3 PF13576.6 ORF66061 - 0.38 10.9 4.9 1.2 9.4 2.9 2.8 3 1 0 3 3 3 0 Pentapeptide repeats (9 copies) Hce2 PF14856.6 ORF65603 - 0.37 11.1 2.8 16 5.8 0.5 3.0 3 0 0 3 3 3 0 Pathogen effector; putative necrosis-inducing factor SAICAR_synt PF01259.18 ORF6449 - 1.5e-46 159.0 0.0 1.8e-46 158.9 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase B9-C2 PF07162.11 ORF64422 - 2e-40 138.8 0.0 2.4e-40 138.5 0.0 1.1 1 0 0 1 1 1 1 Ciliary basal body-associated, B9 protein Myb_DNA-binding PF00249.31 ORF64422 - 0.013 15.7 0.0 0.022 14.9 0.0 1.4 1 0 0 1 1 1 0 Myb-like DNA-binding domain DUF4903 PF16246.5 ORF64228 - 0.094 12.3 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4903) NUDIX PF00293.28 ORF60753 - 1.5e-11 44.5 0.3 2.4e-11 43.8 0.3 1.2 1 0 0 1 1 1 1 NUDIX domain BssB_TutG PF18512.1 ORF59976 - 3.2 7.7 7.9 0.73 9.8 0.2 2.6 2 0 0 2 2 2 0 Benzylsuccinate synthase beta subunit HMG_box_2 PF09011.10 ORF5712 - 0.0066 17.0 5.9 0.014 16.0 5.9 1.5 1 0 0 1 1 1 1 HMG-box domain HMG_box PF00505.19 ORF5712 - 0.12 12.8 6.0 0.27 11.7 6.0 1.6 1 0 0 1 1 1 0 HMG (high mobility group) box Peptidase_C71 PF12386.8 ORF5712 - 0.26 10.9 2.5 1 9.0 0.3 2.1 1 1 0 2 2 2 0 Pseudomurein endo-isopeptidase Pei Methyltransf_25 PF13649.6 ORF56946 - 4.3e-13 49.8 0.0 1e-12 48.6 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF56946 - 6.7e-12 45.5 0.0 1e-11 44.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF56946 - 1.2e-10 41.5 0.0 1.5e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF56946 - 2.1e-09 37.9 0.0 4.3e-09 36.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF56946 - 1.7e-08 35.1 0.0 3.7e-08 34.0 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF56946 - 1.8e-06 27.5 0.0 2.7e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 ORF56946 - 0.00019 21.4 0.0 0.00037 20.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 ORF56946 - 0.00021 20.9 0.0 0.00037 20.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 ORF56946 - 0.00032 20.7 0.0 0.00056 19.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 ORF56946 - 0.0013 18.4 0.0 0.0031 17.1 0.0 1.6 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW CMAS PF02353.20 ORF56946 - 0.0034 16.7 0.0 0.0085 15.4 0.0 1.6 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.11 ORF56946 - 0.0044 16.0 0.0 0.0077 15.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) RrnaAD PF00398.20 ORF56946 - 0.0064 15.6 0.0 0.011 14.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase AdoMet_MTase PF07757.13 ORF56946 - 0.0066 16.8 0.2 0.078 13.3 0.1 2.4 1 1 0 2 2 2 1 Predicted AdoMet-dependent methyltransferase PrmA PF06325.13 ORF56946 - 0.016 14.6 0.0 0.024 14.1 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DOT1 PF08123.13 ORF56946 - 0.017 14.6 0.0 0.027 14.0 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 PCMT PF01135.19 ORF56946 - 0.043 13.6 0.0 0.072 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) N6_N4_Mtase PF01555.18 ORF56946 - 0.073 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 DNA methylase His_Phos_2 PF00328.22 ORF56946 - 0.082 12.2 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Histidine phosphatase superfamily (branch 2) TrkA_N PF02254.18 ORF56946 - 0.14 12.5 0.0 0.28 11.5 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain BssB_TutG PF18512.1 ORF53359 - 3.2 7.7 7.9 0.73 9.8 0.2 2.6 2 0 0 2 2 2 0 Benzylsuccinate synthase beta subunit L-fibroin PF05849.11 ORF49341 - 0.063 12.6 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 Fibroin light chain (L-fibroin) NAD_binding_10 PF13460.6 ORF46524 - 3.1e-13 50.0 0.0 4e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 ORF46524 - 1.1e-07 32.4 0.0 4.5e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NmrA PF05368.13 ORF46524 - 2.5e-05 24.0 0.0 3.5e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 ORF46524 - 4.6e-05 22.6 0.0 5.9e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family HIM1 PF08732.10 ORF46524 - 0.00018 21.0 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 HIM1 Epimerase PF01370.21 ORF46524 - 0.00036 20.1 0.0 0.00051 19.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DapB_N PF01113.20 ORF46524 - 0.00092 19.3 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 ORF46524 - 0.0087 16.3 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Polysacc_synt_2 PF02719.15 ORF46524 - 0.049 12.8 0.0 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein BAH PF01426.18 ORF46524 - 0.15 11.9 0.2 0.24 11.2 0.2 1.3 1 0 0 1 1 1 0 BAH domain NAD_binding_4 PF07993.12 ORF46524 - 0.17 11.0 0.0 0.35 10.0 0.0 1.5 2 0 0 2 2 2 0 Male sterility protein Ras PF00071.22 ORF45228 - 4e-57 192.3 0.5 4.8e-57 192.1 0.5 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF45228 - 2.3e-34 118.2 0.1 4.1e-34 117.4 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF45228 - 2.1e-13 50.1 0.0 2.8e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 ORF45228 - 3.6e-05 23.7 0.1 0.083 12.8 0.0 2.3 2 1 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 ORF45228 - 4.3e-05 23.1 0.0 0.00041 20.0 0.0 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 ORF45228 - 7.8e-05 22.2 0.0 0.00021 20.8 0.0 1.7 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 ORF45228 - 0.00013 21.4 0.0 0.00016 21.1 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 ORF45228 - 0.00015 21.8 0.0 0.00023 21.2 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF45228 - 0.00041 19.9 0.0 0.38 10.3 0.0 2.4 2 0 0 2 2 2 2 Ferrous iron transport protein B PduV-EutP PF10662.9 ORF45228 - 0.0084 15.9 0.1 0.041 13.6 0.1 1.9 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation Pinin_SDK_N PF04697.13 ORF45228 - 0.011 16.4 0.4 0.023 15.3 0.2 1.6 1 1 0 1 1 1 0 pinin/SDK conserved region Dynamin_N PF00350.23 ORF45228 - 0.09 12.8 0.0 0.23 11.5 0.0 1.7 1 0 0 1 1 1 0 Dynamin family Biotin_carb_C PF02785.19 ORF45228 - 0.12 12.5 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Biotin carboxylase C-terminal domain AAA_7 PF12775.7 ORF45228 - 0.13 11.8 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AEP1 PF17049.5 ORF45228 - 0.23 10.5 0.0 0.33 10.0 0.0 1.1 1 0 0 1 1 1 0 ATPase expression protein 1 G2F PF07474.12 ORF43416 - 0.036 13.9 1.6 0.051 13.4 1.0 1.6 1 1 1 2 2 2 0 G2F domain Aldo_ket_red PF00248.21 ORF41129 - 3.4e-12 46.2 0.0 6e-12 45.3 0.0 1.4 1 1 0 1 1 1 1 Aldo/keto reductase family INCA1 PF15142.6 ORF38529 - 0.038 14.0 0.6 0.13 12.3 0.6 2.0 1 1 0 1 1 1 0 INCA1 Dicty_CTDC PF00526.18 ORF38261 - 1.5 8.8 4.6 1.6 8.7 1.7 2.5 2 0 0 2 2 2 0 Dictyostelium (slime mold) repeat TetR_C_32 PF09209.11 ORF36229 - 2.1e-37 127.9 0.8 4.2e-37 126.9 0.5 1.7 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain TetR_N PF00440.23 ORF36229 - 2.3e-14 52.9 2.6 9.4e-14 50.9 0.7 2.3 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Metal_resist PF13801.6 ORF36229 - 0.001 19.2 0.3 0.0025 18.0 0.3 1.6 1 0 0 1 1 1 1 Heavy-metal resistance PAS_11 PF14598.6 ORF36229 - 0.13 12.4 0.1 0.25 11.5 0.1 1.6 1 1 0 1 1 1 0 PAS domain Cnd2 PF05786.14 ORF3139 - 1.1 7.9 14.0 1.4 7.5 14.0 1.2 1 0 0 1 1 1 0 Condensin complex subunit 2 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks97.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks97.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks97.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks97.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:33 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- PARP PF00644.20 ORF27871 - 5.5e-09 35.9 0.2 6.3e-07 29.2 0.2 2.3 1 1 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain DUF2767 PF10965.8 ORF27871 - 0.04 13.9 0.4 0.11 12.5 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2767) CDK2AP PF09806.9 ORF22465 - 0.079 13.0 9.5 0.12 12.4 9.5 1.3 1 0 0 1 1 1 0 Cyclin-dependent kinase 2-associated protein DUF3292 PF11696.8 ORF22465 - 0.53 8.6 4.3 0.7 8.2 4.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) TFIIA PF03153.13 ORF22465 - 0.64 9.9 5.9 0.72 9.8 5.9 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Tic110 PF16940.5 ORF22465 - 1.6 7.1 8.5 2 6.8 8.5 1.3 1 0 0 1 1 1 0 Chloroplast envelope transporter Ras PF00071.22 ORF22256 - 5.1e-49 166.0 3.0 6.4e-49 165.7 3.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 ORF22256 - 2e-31 108.7 0.4 3.9e-31 107.8 0.4 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 ORF22256 - 2.5e-10 40.1 0.5 3.2e-10 39.7 0.5 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 ORF22256 - 3e-06 27.3 0.1 4.7e-06 26.7 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 ORF22256 - 0.00032 20.1 0.6 0.00049 19.5 0.6 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 ORF22256 - 0.018 14.9 0.3 0.84 9.5 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase Galactosyl_T PF01762.21 ORF22256 - 0.037 13.8 0.2 0.058 13.2 0.2 1.3 1 0 0 1 1 1 0 Galactosyltransferase T2SS_PulS_OutS PF09691.10 ORF22256 - 0.065 13.4 0.2 0.3 11.3 0.1 2.0 2 0 0 2 2 2 0 Type II secretion system pilotin lipoprotein (PulS_OutS) ETC_C1_NDUFA4 PF04800.12 ORF22256 - 0.12 12.6 0.4 0.2 11.9 0.4 1.5 1 1 0 1 1 1 0 ETC complex I subunit conserved region Chloroa_b-bind PF00504.21 ORF1746 - 9.8e-40 136.7 0.8 6.4e-31 108.1 0.0 2.1 2 0 0 2 2 2 2 Chlorophyll A-B binding protein NAD_binding_10 PF13460.6 ORF17218 - 3.1e-13 50.0 0.0 4e-13 49.7 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 ORF17218 - 1.1e-07 32.4 0.0 4.5e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NmrA PF05368.13 ORF17218 - 2.5e-05 24.0 0.0 3.5e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family 3Beta_HSD PF01073.19 ORF17218 - 4.6e-05 22.6 0.0 5.9e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family HIM1 PF08732.10 ORF17218 - 0.00018 21.0 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 HIM1 Epimerase PF01370.21 ORF17218 - 0.00036 20.1 0.0 0.00051 19.6 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family DapB_N PF01113.20 ORF17218 - 0.00092 19.3 0.0 0.0016 18.6 0.0 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 ORF17218 - 0.0087 16.3 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Polysacc_synt_2 PF02719.15 ORF17218 - 0.049 12.8 0.0 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein BAH PF01426.18 ORF17218 - 0.15 11.9 0.2 0.24 11.2 0.2 1.3 1 0 0 1 1 1 0 BAH domain NAD_binding_4 PF07993.12 ORF17218 - 0.17 11.0 0.0 0.35 10.0 0.0 1.5 2 0 0 2 2 2 0 Male sterility protein Bax1-I PF01027.20 ORF152672 - 3.5e-34 118.5 24.5 4e-34 118.3 24.5 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Abhydrolase_6 PF12697.7 ORF145886 - 3.6e-08 34.3 4.0 7.2e-08 33.3 4.0 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 ORF145886 - 5.1e-06 25.9 0.0 2.8e-05 23.5 0.0 1.8 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Lipase_3 PF01764.25 ORF145886 - 0.00023 21.1 0.0 0.00029 20.7 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Abhydrolase_1 PF00561.20 ORF145886 - 0.00042 20.0 0.0 0.0066 16.1 0.0 2.0 2 0 0 2 2 2 1 alpha/beta hydrolase fold Thioesterase PF00975.20 ORF145886 - 0.00074 19.7 0.1 0.001 19.2 0.1 1.2 1 0 0 1 1 1 1 Thioesterase domain DUF900 PF05990.12 ORF145886 - 0.001 18.7 0.0 0.0014 18.1 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_2 PF02230.16 ORF145886 - 0.053 13.3 0.0 0.3 10.9 0.0 1.9 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase DUF1057 PF06342.12 ORF145886 - 0.063 12.3 0.0 0.082 11.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Lipase PF00151.19 ORF145886 - 0.26 10.5 0.1 0.37 10.0 0.1 1.1 1 0 0 1 1 1 0 Lipase Nramp PF01566.18 ORF143505 - 5.6e-65 219.7 12.6 5.6e-65 219.7 12.6 1.3 2 0 0 2 2 2 1 Natural resistance-associated macrophage protein DUF983 PF06170.12 ORF143505 - 4.6 7.7 9.7 1.8 9.0 1.3 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF983) DUF4962 PF16332.5 ORF138539 - 0.92 7.9 5.1 0.95 7.9 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4962) DUF2878 PF11086.8 ORF13636 - 5.5e-23 81.9 11.6 7e-23 81.5 11.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2878) Spot_14 PF07084.12 ORF134969 - 0.011 15.9 5.6 0.058 13.5 5.6 2.0 1 1 0 1 1 1 0 Thyroid hormone-inducible hepatic protein Spot 14 COG2 PF06148.11 ORF134969 - 0.016 15.3 6.1 0.22 11.6 0.6 2.7 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Baculo_PEP_C PF04513.12 ORF134969 - 0.034 14.2 8.4 1.4 9.0 0.2 3.0 1 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Synaptobrevin PF00957.21 ORF134969 - 0.84 9.5 8.8 1.1 9.1 0.6 3.1 3 1 0 3 3 3 0 Synaptobrevin DUF3198 PF11433.8 ORF134969 - 1.2 9.0 7.4 0.13 12.2 1.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3198) DUF2115 PF09888.9 ORF134969 - 4.2 7.9 7.3 1.9 9.0 1.9 2.4 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2115) AI-2E_transport PF01594.16 ORF134969 - 5.6 6.0 4.9 11 5.1 0.3 2.2 2 0 0 2 2 2 0 AI-2E family transporter COMM_domain PF07258.14 ORF130130 - 0.00049 20.2 1.9 0.0089 16.1 0.3 3.0 3 0 0 3 3 3 1 COMM domain CARD PF00619.21 ORF130130 - 0.11 12.5 0.6 1.5 8.9 0.1 2.5 2 0 0 2 2 2 0 Caspase recruitment domain P2 PF07194.11 ORF130130 - 0.12 12.5 0.2 0.12 12.5 0.2 2.3 3 1 0 3 3 3 0 P2 response regulator binding domain DnaI_N PF07319.11 ORF130130 - 0.81 10.4 4.0 0.36 11.5 0.5 2.2 2 1 1 3 3 3 0 Primosomal protein DnaI N-terminus Kelch_6 PF13964.6 ORF129490 - 1.2e-17 63.5 0.1 3.9e-09 36.5 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_4 PF13418.6 ORF129490 - 1.4e-17 63.4 1.2 2.3e-07 30.7 0.0 3.8 3 1 0 3 3 3 3 Galactose oxidase, central domain Kelch_3 PF13415.6 ORF129490 - 4.2e-14 52.4 0.2 7.4e-08 32.5 0.0 3.8 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_1 PF01344.25 ORF129490 - 2e-13 49.7 0.0 3.9e-08 32.7 0.0 3.3 3 0 0 3 3 3 2 Kelch motif Kelch_5 PF13854.6 ORF129490 - 2.4e-09 37.0 0.2 0.0013 18.6 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_2 PF07646.15 ORF129490 - 6.8e-09 35.4 0.2 0.0017 18.2 0.0 3.2 3 0 0 3 3 3 2 Kelch motif KxDL PF10241.9 ORF129490 - 0.072 13.4 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized conserved protein Methyltransf_25 PF13649.6 ORF126190 - 3.3e-11 43.7 0.0 3.2e-10 40.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF126190 - 2.2e-08 34.1 0.0 2.6e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF126190 - 3.3e-08 33.5 0.0 5.8e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF126190 - 9.2e-08 32.6 0.0 2.8e-07 31.1 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF126190 - 1e-07 32.6 0.0 4.4e-07 30.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_9 PF08003.11 ORF126190 - 0.0012 17.8 0.0 0.0022 17.0 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) MTS PF05175.14 ORF126190 - 0.0075 15.8 0.0 0.015 14.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 ORF126190 - 0.015 14.6 0.0 0.038 13.3 0.0 1.7 1 1 1 2 2 2 0 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 ORF126190 - 0.015 15.3 0.1 0.03 14.3 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase domain Astacin PF01400.24 ORF126190 - 0.09 12.4 0.6 5.2 6.6 0.1 2.2 2 0 0 2 2 2 0 Astacin (Peptidase family M12A) RRF PF01765.19 ORF125629 - 1.7e-62 210.1 1.3 2e-62 209.9 1.3 1.0 1 0 0 1 1 1 1 Ribosome recycling factor CCDC85 PF10226.9 ORF125629 - 0.095 12.4 4.8 0.14 11.8 4.8 1.1 1 0 0 1 1 1 0 CCDC85 family DUF496 PF04363.12 ORF125037 - 0.061 13.3 0.5 0.061 13.3 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF496) CRAL_TRIO PF00650.20 ORF119702 - 2.9e-24 85.6 0.0 3.8e-24 85.2 0.0 1.1 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 ORF119702 - 0.0016 18.6 0.0 0.0026 17.9 0.0 1.2 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain DUF4962 PF16332.5 ORF119168 - 0.92 7.9 5.1 0.95 7.9 5.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4962) NIF3 PF01784.18 ORF116969 - 0.19 11.4 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 NIF3 (NGG1p interacting factor 3) Sulfotransfer_2 PF03567.14 ORF116430 - 0.00011 22.2 1.4 0.00016 21.7 1.3 1.4 1 1 0 1 1 1 1 Sulfotransferase family Axin_b-cat_bind PF08833.10 ORF114781 - 5.4 7.2 7.1 29 4.9 0.4 2.6 2 0 0 2 2 2 0 Axin beta-catenin binding domain zf-RING_2 PF13639.6 ORF113976 - 1e-10 41.8 8.4 2e-10 40.8 8.4 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 ORF113976 - 6.7e-09 35.5 5.1 1.2e-08 34.7 5.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 ORF113976 - 5.2e-08 32.6 7.3 8.4e-08 32.0 7.3 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 ORF113976 - 3.7e-07 30.1 1.3 1.4e-06 28.2 0.5 2.3 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 ORF113976 - 6.2e-07 29.3 6.8 1.1e-06 28.5 6.8 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 ORF113976 - 7e-07 29.0 6.0 1.3e-06 28.1 6.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 ORF113976 - 2.8e-05 23.8 6.2 7.9e-05 22.3 6.2 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 ORF113976 - 8.4e-05 22.3 8.0 0.00018 21.2 8.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF113976 - 0.0015 18.8 5.9 0.0028 17.9 5.9 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 ORF113976 - 0.0064 16.6 11.3 0.019 15.1 10.2 2.3 2 1 1 3 3 3 1 zinc finger of C3HC4-type, RING zf-ANAPC11 PF12861.7 ORF113976 - 0.012 15.7 5.3 0.021 14.9 5.3 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_4 PF14570.6 ORF113976 - 0.024 14.5 5.1 0.052 13.4 5.1 1.6 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF1772 PF08592.11 ORF113976 - 0.033 14.5 0.0 0.045 14.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) CopD PF05425.13 ORF113976 - 0.058 13.8 0.0 0.091 13.2 0.0 1.2 1 0 0 1 1 1 0 Copper resistance protein D Baculo_IE-1 PF05290.11 ORF113976 - 0.38 10.7 3.4 0.51 10.3 3.4 1.2 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) SAMP PF05924.11 ORF112830 - 1.7 8.0 6.9 0.96 8.8 0.7 2.3 2 0 0 2 2 2 0 SAMP Motif Cnd2 PF05786.14 ORF111416 - 1.1 7.9 14.0 1.4 7.5 14.0 1.2 1 0 0 1 1 1 0 Condensin complex subunit 2 Trefoil PF00088.18 ORF109561 - 0.024 14.5 1.5 0.048 13.5 0.9 1.8 2 0 0 2 2 2 0 Trefoil (P-type) domain Amj PF10997.8 ORF109561 - 0.026 13.9 3.8 0.035 13.4 3.8 1.1 1 0 0 1 1 1 0 Alternate to MurJ Ribosomal_L29 PF00831.23 ORF107429 - 0.18 11.8 2.7 0.22 11.5 0.3 2.2 2 0 0 2 2 2 0 Ribosomal L29 protein Methyltransf_21 PF05050.12 ORF106663 - 1.1e-10 41.9 0.0 1.4e-10 41.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase FkbM domain Methyltransf_23 PF13489.6 ORF106663 - 0.006 16.4 0.0 0.014 15.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain BssB_TutG PF18512.1 ORF106160 - 3.2 7.7 7.9 0.73 9.8 0.2 2.6 2 0 0 2 2 2 0 Benzylsuccinate synthase beta subunit Cnd2 PF05786.14 ORF105855 - 1.1 7.9 14.0 1.4 7.5 14.0 1.2 1 0 0 1 1 1 0 Condensin complex subunit 2 Mito_carr PF00153.27 ORF104276 - 2e-22 78.9 0.8 2.4e-12 46.6 0.0 2.6 3 0 0 3 3 3 2 Mitochondrial carrier protein COX7C PF02935.16 ORF104276 - 0.0045 17.2 1.0 0.022 15.0 1.2 2.0 2 0 0 2 2 2 1 Cytochrome c oxidase subunit VIIc Tim17 PF02466.19 ORF102319 - 1.9e-06 28.2 0.1 3.8e-06 27.2 0.1 1.5 1 1 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family NIF PF03031.18 ORF101832 - 2.1e-33 115.3 0.0 2.8e-33 114.9 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Herpes_U5 PF05999.11 ORF101832 - 0.11 11.3 0.2 0.25 10.1 0.2 1.5 1 1 0 1 1 1 0 Herpesvirus U5-like family PhoLip_ATPase_C PF16212.5 ORF100597 - 3.7e-16 59.6 20.0 4.7e-16 59.3 20.0 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Fib_alpha PF08702.10 NODE_32185_length_676_cov_153.722309_g25531_i0reverse_frame_1 - 0.61 10.3 3.3 4.9 7.3 1.1 2.3 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family RskA PF10099.9 NODE_32162_length_677_cov_3.686916_g25511_i0reverse_frame_1 - 0.59 10.4 9.6 0.54 10.5 8.1 1.7 1 1 1 2 2 2 0 Anti-sigma-K factor rskA DRMBL PF07522.14 NODE_32159_length_677_cov_63.448598_g25508_i0reverse_frame_1 - 0.014 15.5 0.0 0.039 14.1 0.0 1.7 1 0 0 1 1 1 0 DNA repair metallo-beta-lactamase PH_8 PF15409.6 NODE_32159_length_677_cov_63.448598_g25508_i0reverse_frame_1 - 1.8 8.9 5.7 14 6.0 2.7 2.3 2 0 0 2 2 2 0 Pleckstrin homology domain RCC1_2 PF13540.6 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 2.2e-06 27.3 21.4 1.1 9.2 0.8 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat DUF155 PF02582.14 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 0.01 16.0 2.5 24 4.9 0.2 4.2 3 2 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 PhnH PF05845.12 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 0.012 15.4 0.2 0.92 9.2 0.0 2.2 1 1 2 3 3 3 0 Bacterial phosphonate metabolism protein (PhnH) Capsule_synth PF05159.14 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 0.038 13.4 2.5 1.8 7.9 0.1 2.9 3 1 1 4 4 4 0 Capsule polysaccharide biosynthesis protein PheRS_DBD2 PF18554.1 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_1 - 3.5 7.7 20.8 23 5.1 1.0 5.2 5 0 0 5 5 5 0 PheRS DNA binding domain 2 RCC1_2 PF13540.6 NODE_32099_length_678_cov_303.743390_g25457_i0reverse_frame_1 - 2.2e-06 27.3 21.4 1.1 9.2 0.8 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat PhnH PF05845.12 NODE_32099_length_678_cov_303.743390_g25457_i0reverse_frame_1 - 0.012 15.4 0.2 0.91 9.2 0.0 2.2 1 1 2 3 3 3 0 Bacterial phosphonate metabolism protein (PhnH) DUF155 PF02582.14 NODE_32099_length_678_cov_303.743390_g25457_i0reverse_frame_1 - 0.018 15.1 2.9 24 4.9 0.2 4.2 3 2 0 3 3 3 0 Uncharacterised ACR, YagE family COG1723 Capsule_synth PF05159.14 NODE_32099_length_678_cov_303.743390_g25457_i0reverse_frame_1 - 0.02 14.4 1.7 1.8 7.9 0.1 2.9 3 1 1 4 4 4 0 Capsule polysaccharide biosynthesis protein DUF1979 PF09322.10 NODE_32084_length_678_cov_4644.944012_g25446_i0forward_frame_1 - 0.035 14.0 0.0 0.082 12.8 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1979) FpoO PF10621.9 NODE_32032_length_680_cov_1.905426_g25405_i0reverse_frame_3 - 0.2 12.0 1.4 0.63 10.4 1.4 1.8 1 1 0 1 1 1 0 F420H2 dehydrogenase subunit FpoO Suv3_N PF18114.1 NODE_32032_length_680_cov_1.905426_g25405_i0reverse_frame_2 - 0.064 13.4 0.0 0.23 11.6 0.0 1.7 1 1 1 2 2 2 0 Suv3 helical N-terminal domain DUF4211 PF13926.6 NODE_32032_length_680_cov_1.905426_g25405_i0forward_frame_2 - 0.18 11.8 0.1 0.27 11.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4211) ATPase PF06745.13 NODE_32031_length_680_cov_2.204651_g25404_i0reverse_frame_2 - 0.22 10.8 0.0 0.31 10.4 0.0 1.1 1 0 0 1 1 1 0 KaiC GST_C PF00043.25 ORF99648 - 1.6e-12 47.5 0.1 3.3e-12 46.5 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF99648 - 9.2e-12 45.1 0.0 4.7e-11 42.9 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF99648 - 3.2e-10 40.3 0.0 5.5e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF99648 - 8.5e-08 32.3 0.1 1.7e-07 31.4 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF99648 - 1.8e-05 24.7 0.0 4.5e-05 23.4 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF99648 - 4.2e-05 23.8 0.0 8.4e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 ORF99648 - 0.00048 20.8 0.0 0.0051 17.5 0.0 2.5 2 1 0 2 2 2 1 Glutathione S-transferase N-terminal domain GST_C_6 PF17171.4 ORF99648 - 0.079 12.8 0.1 0.16 11.8 0.1 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Heme_oxygenase PF01126.20 ORF98602 - 0.093 12.5 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Heme oxygenase DDHD PF02862.17 ORF98602 - 0.18 11.9 3.4 0.27 11.3 3.4 1.3 1 0 0 1 1 1 0 DDHD domain Goodbye PF17109.5 ORF98602 - 0.24 11.9 2.8 10 6.6 1.4 2.4 2 0 0 2 2 2 0 fungal STAND N-terminal Goodbye domain DTHCT PF08070.11 ORF98602 - 0.35 11.6 8.7 0.6 10.9 8.7 1.4 1 0 0 1 1 1 0 DTHCT (NUC029) region Heme_oxygenase PF01126.20 ORF96598 - 0.093 12.5 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Heme oxygenase DDHD PF02862.17 ORF96598 - 0.18 11.9 3.4 0.27 11.3 3.4 1.3 1 0 0 1 1 1 0 DDHD domain Goodbye PF17109.5 ORF96598 - 0.24 11.9 2.8 10 6.6 1.4 2.4 2 0 0 2 2 2 0 fungal STAND N-terminal Goodbye domain DTHCT PF08070.11 ORF96598 - 0.35 11.6 8.7 0.6 10.9 8.7 1.4 1 0 0 1 1 1 0 DTHCT (NUC029) region FAM219A PF15260.6 ORF95785 - 1.7 9.0 9.4 0.082 13.3 1.4 2.5 2 1 1 3 3 3 0 Protein family FAM219A DUF4585 PF15232.6 ORF93812 - 0.04 14.0 0.2 0.11 12.6 0.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4585) Occludin_ELL PF07303.13 ORF91220 - 0.34 11.7 4.7 0.32 11.7 2.8 2.0 2 1 0 2 2 2 0 Occludin homology domain DUF2719 PF10891.8 ORF8869 - 0.065 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2719) Heme_oxygenase PF01126.20 ORF85539 - 0.093 12.5 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Heme oxygenase DDHD PF02862.17 ORF85539 - 0.18 11.9 3.4 0.27 11.3 3.4 1.3 1 0 0 1 1 1 0 DDHD domain Goodbye PF17109.5 ORF85539 - 0.24 11.9 2.8 10 6.6 1.4 2.4 2 0 0 2 2 2 0 fungal STAND N-terminal Goodbye domain DTHCT PF08070.11 ORF85539 - 0.35 11.6 8.7 0.6 10.9 8.7 1.4 1 0 0 1 1 1 0 DTHCT (NUC029) region DUF1199 PF06712.11 ORF84939 - 0.13 12.3 0.5 0.4 10.7 0.5 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1199) CAP_N PF01213.19 ORF83908 - 0.031 13.8 0.3 0.062 12.8 0.1 1.6 1 1 1 2 2 2 0 Adenylate cyclase associated (CAP) N terminal Baculo_PEP_C PF04513.12 ORF83908 - 0.037 14.1 0.1 0.12 12.4 0.0 1.8 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3887 PF13026.6 ORF83908 - 0.038 14.8 1.7 0.14 13.0 0.3 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF3887) ApoLp-III PF07464.11 ORF83908 - 0.046 13.8 0.3 0.28 11.2 0.0 2.2 2 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DUF1461 PF07314.11 ORF83908 - 0.062 13.2 1.2 0.37 10.7 1.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1461) Nmad5 PF18757.1 ORF83908 - 0.1 12.8 1.9 0.16 12.2 1.9 1.3 1 0 0 1 1 1 0 Nucleotide modification associated domain 5 Lebercilin PF15619.6 ORF83908 - 0.23 11.1 3.8 7.8 6.1 0.3 2.3 2 0 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF4298 PF14131.6 ORF83908 - 0.49 10.4 6.2 2.8 8.0 0.6 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4298) GrpE PF01025.19 ORF83908 - 1.2 8.7 6.0 3.2 7.4 0.3 2.5 2 1 0 2 2 2 0 GrpE DUF5082 PF16888.5 ORF83908 - 2.2 8.6 6.4 1.1 9.5 1.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) LRR_4 PF12799.7 ORF83156 - 1.1e-07 32.1 3.9 4.2e-05 23.8 0.2 3.1 2 1 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 ORF83156 - 1.3e-05 24.7 0.1 1.6e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 ORF83156 - 0.0012 18.6 5.1 0.0094 15.7 3.5 2.7 2 1 1 3 3 3 2 Leucine rich repeat LRR_6 PF13516.6 ORF83156 - 0.014 15.4 3.3 0.3 11.2 0.3 3.3 2 0 0 2 2 2 0 Leucine Rich repeat IcmF_C PF06744.12 ORF81599 - 0.042 13.4 0.4 0.11 12.1 0.2 1.6 1 1 1 2 2 2 0 Type VI secretion protein IcmF C-terminal SNARE_assoc PF09335.11 ORF81476 - 2.7e-06 27.9 1.0 2.7e-06 27.9 1.0 1.9 2 0 0 2 2 2 1 SNARE associated Golgi protein PBP1_TM PF14812.6 ORF81476 - 0.0023 18.2 0.0 0.0041 17.4 0.0 1.4 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Saf_2TM PF18303.1 ORF81476 - 0.072 12.7 0.8 0.58 9.7 0.0 2.3 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain DUF2663 PF10864.8 ORF81476 - 0.11 12.9 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Promethin PF16015.5 ORF81476 - 1.5 8.8 6.1 0.57 10.1 3.1 1.8 1 1 1 2 2 2 0 Promethin DUF2207 PF09972.9 ORF81476 - 1.9 7.2 8.8 1.4 7.6 0.0 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF1324 PF07038.11 ORF80744 - 0.0061 16.8 0.0 0.013 15.7 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1324) Methyltransf_25 PF13649.6 ORF79607 - 5.4e-10 39.9 0.0 1e-09 39.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 ORF79607 - 1.3e-07 31.5 0.1 3.1e-07 30.3 0.0 1.7 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF79607 - 3.3e-07 30.9 0.0 6.7e-07 29.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF79607 - 1.3e-06 28.3 0.0 2e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF79607 - 3.4e-06 27.7 0.0 7.5e-06 26.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 ORF79607 - 0.00063 19.1 0.0 0.00091 18.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 ORF79607 - 0.025 14.2 0.0 0.039 13.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain PrmA PF06325.13 ORF79607 - 0.04 13.3 0.0 0.055 12.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 ORF79607 - 0.055 13.4 0.0 0.088 12.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 ORF79607 - 0.22 11.1 0.0 0.33 10.5 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Flavin_Reduct PF01613.18 ORF78158 - 5e-19 68.9 0.0 7e-19 68.4 0.0 1.2 1 0 0 1 1 1 1 Flavin reductase like domain Fib_alpha PF08702.10 ORF77935 - 0.34 11.1 1.5 1.9 8.7 0.1 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family GST_C_3 PF14497.6 ORF77526 - 7.1e-15 55.0 0.1 1.6e-14 53.9 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF77526 - 2.4e-11 43.8 0.0 7.7e-11 42.2 0.0 1.9 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 ORF77526 - 0.0065 16.9 0.0 0.015 15.7 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF77526 - 0.024 14.9 0.1 0.066 13.4 0.0 1.7 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 ORF77526 - 0.12 12.4 0.3 0.53 10.3 0.3 2.3 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain PhoPQ_related PF10142.9 ORF77286 - 4.1e-05 22.4 0.0 5.6e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 PhoPQ-activated pathogenicity-related protein UIM PF02809.20 ORF77286 - 0.0064 16.3 3.0 0.016 15.1 3.0 1.7 1 0 0 1 1 1 1 Ubiquitin interaction motif Hydrolase_4 PF12146.8 ORF77286 - 0.025 13.9 0.0 3.5 6.8 0.0 2.2 1 1 1 2 2 2 0 Serine aminopeptidase, S33 FSH1 PF03959.13 ORF77286 - 0.13 11.9 0.0 0.25 11.0 0.0 1.6 2 0 0 2 2 2 0 Serine hydrolase (FSH1) Ndc1_Nup PF09531.10 ORF74889 - 2.8 6.5 4.1 2.8 6.5 4.1 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Presenilin PF01080.17 ORF74889 - 5.3 5.7 5.2 5.5 5.6 5.2 1.2 1 0 0 1 1 1 0 Presenilin P5-ATPase PF12409.8 ORF74622 - 0.77 9.9 5.1 0.96 9.6 3.4 2.1 1 1 0 1 1 1 0 P5-type ATPase cation transporter WD40 PF00400.32 ORF740 - 9.2e-09 35.8 0.2 0.11 13.4 0.0 4.5 5 0 0 5 5 5 3 WD domain, G-beta repeat DUF4199 PF13858.6 ORF68852 - 0.00015 22.2 0.3 0.00015 22.2 0.3 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF4199) Endonuc_Holl PF10107.9 ORF68852 - 0.0018 18.2 0.2 0.0029 17.5 0.2 1.3 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase DUF4834 PF16118.5 ORF68852 - 0.0097 16.9 3.5 0.034 15.1 0.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4834) Virul_fac_BrkB PF03631.15 ORF68852 - 0.014 15.0 0.1 0.022 14.4 0.1 1.3 1 0 0 1 1 1 0 Virulence factor BrkB DUF2207 PF09972.9 ORF68852 - 0.071 11.9 3.8 8.6 5.0 4.3 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) TRP PF06011.12 ORF68852 - 0.23 10.2 4.4 1 8.0 3.2 1.9 1 1 1 2 2 2 0 Transient receptor potential (TRP) ion channel Comm PF15957.5 ORF68852 - 0.24 11.7 0.1 0.24 11.7 0.1 1.8 1 1 1 2 2 2 0 Commissureless WD40 PF00400.32 ORF68808 - 3.4e-10 40.3 7.6 0.00019 22.1 0.0 4.2 5 0 0 5 5 5 3 WD domain, G-beta repeat BBS2_Mid PF14783.6 ORF68808 - 0.1 12.6 0.0 0.85 9.7 0.0 2.1 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 2, middle region 7tm_3 PF00003.22 ORF68026 - 2.1 8.0 13.5 2.1 8.0 1.1 2.2 1 1 1 2 2 2 0 7 transmembrane sweet-taste receptor of 3 GCPR RRM_1 PF00076.22 ORF67189 - 2.9e-31 107.1 0.1 3.5e-16 58.8 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 ORF67189 - 8.9e-05 22.1 0.0 0.0006 19.4 0.0 2.0 1 1 1 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 ORF67189 - 0.097 12.5 0.0 1.2 9.1 0.0 2.2 2 0 0 2 2 2 0 Occluded RNA-recognition motif HAUS-augmin3 PF14932.6 ORF67136 - 0.0045 16.6 11.5 0.0045 16.6 11.5 2.0 1 1 1 2 2 2 2 HAUS augmin-like complex subunit 3 SlyX PF04102.12 ORF67136 - 0.021 15.4 8.1 0.021 15.4 8.1 3.0 1 1 2 3 3 3 0 SlyX PRKG1_interact PF15898.5 ORF67136 - 0.054 14.4 21.0 0.12 13.3 10.7 2.9 1 1 2 3 3 3 0 cGMP-dependent protein kinase interacting domain PKcGMP_CC PF16808.5 ORF67136 - 0.099 12.5 13.0 0.78 9.6 0.0 4.1 3 1 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase IFT20 PF14931.6 ORF67136 - 0.2 11.8 17.9 1.7 8.8 9.3 2.4 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 Syntaxin_2 PF14523.6 ORF67136 - 0.34 11.3 14.7 0.43 11.0 7.3 2.9 1 1 2 3 3 3 0 Syntaxin-like protein TolA_bind_tri PF16331.5 ORF67136 - 0.42 10.7 22.1 1.3 9.1 12.1 2.5 2 1 0 2 2 2 0 TolA binding protein trimerisation DUF5403 PF17395.2 ORF67136 - 0.5 10.7 4.3 1.6 9.1 1.4 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5403) DUF547 PF04784.14 ORF67136 - 0.62 10.1 2.9 12 6.0 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function, DUF547 UPF0184 PF03670.13 ORF67136 - 0.93 9.9 6.5 1.1 9.7 3.2 2.4 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) UPF0242 PF06785.11 ORF67136 - 1.1 9.3 28.3 0.75 9.9 22.8 2.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus TTKRSYEDQ PF10212.9 ORF67136 - 1.3 7.9 14.2 0.15 11.0 9.2 1.7 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein Spc7 PF08317.11 ORF67136 - 1.8 7.4 27.2 1.2 8.0 19.9 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein DUF641 PF04859.12 ORF67136 - 2.1 8.7 17.8 3.8 7.8 2.7 2.7 1 1 0 2 2 2 0 Plant protein of unknown function (DUF641) V_ATPase_I PF01496.19 ORF67136 - 2.3 6.0 11.4 2.8 5.7 11.4 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Mif2_N PF15624.6 ORF67136 - 2.4 8.9 8.1 34 5.1 8.1 2.1 1 1 0 1 1 1 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal YlqD PF11068.8 ORF67136 - 3.1 8.2 27.4 0.032 14.6 7.1 2.3 1 1 1 2 2 2 0 YlqD protein KxDL PF10241.9 ORF67136 - 3.5 8.0 13.8 10 6.4 1.6 2.7 1 1 0 2 2 2 0 Uncharacterized conserved protein DUF1664 PF07889.12 ORF67136 - 3.8 7.6 11.7 0.44 10.6 2.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Rotamase PF00639.21 ORF67136 - 7.1 7.7 15.5 3.9 8.5 2.3 2.4 1 1 0 2 2 2 0 PPIC-type PPIASE domain Lipoprotein_16 PF03923.13 ORF66915 - 6.2e-53 178.7 4.8 7.3e-53 178.5 4.8 1.0 1 0 0 1 1 1 1 Uncharacterized lipoprotein LPAM_1 PF08139.12 ORF66915 - 6.9e-05 23.1 1.2 0.00014 22.2 1.2 1.5 1 0 0 1 1 1 1 Prokaryotic membrane lipoprotein lipid attachment site AcylCoA_DH_N PF12418.8 ORF66915 - 0.11 12.6 0.3 0.21 11.7 0.3 1.5 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase N terminal Usher PF00577.20 ORF63544 - 8.2e-35 120.7 0.4 9.6e-35 120.4 0.4 1.1 1 0 0 1 1 1 1 Outer membrane usher protein PapC_C PF13953.6 ORF63544 - 3.6e-13 49.1 0.0 7.7e-13 48.1 0.0 1.6 1 0 0 1 1 1 1 PapC C-terminal domain DM PF00751.18 ORF62490 - 0.034 14.1 8.9 0.079 12.9 8.9 1.6 1 0 0 1 1 1 0 DM DNA binding domain CEBP_ZZ PF16366.5 ORF62490 - 0.044 14.0 5.5 0.1 12.9 5.5 1.6 1 0 0 1 1 1 0 Cytoplasmic polyadenylation element-binding protein ZZ domain THF_DHG_CYH PF00763.23 ORF62490 - 0.056 13.7 0.8 0.15 12.4 0.8 1.9 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FYVE PF01363.21 ORF62490 - 0.058 13.5 9.0 0.092 12.9 9.0 1.4 1 1 0 1 1 1 0 FYVE zinc finger YEATS PF03366.16 ORF61217 - 9.6e-20 70.4 2.2 1.5e-19 69.7 2.2 1.3 1 0 0 1 1 1 1 YEATS family zf-C3HC4_2 PF13923.6 ORF61217 - 5.1e-10 39.0 15.4 8.7e-10 38.3 15.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 ORF61217 - 5.8e-09 35.7 17.2 1.1e-08 34.8 17.2 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 ORF61217 - 8.2e-08 32.2 9.5 8.2e-08 32.2 9.5 1.8 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 ORF61217 - 5.2e-07 29.4 13.6 7.8e-07 28.9 13.6 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 ORF61217 - 5.5e-07 29.8 14.6 9.4e-07 29.1 14.6 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 ORF61217 - 3.6e-05 23.6 18.2 6.1e-05 22.9 18.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 ORF61217 - 5.6e-05 23.2 16.8 0.00011 22.3 16.8 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_6 PF14835.6 ORF61217 - 0.00045 20.0 6.7 0.00082 19.2 6.7 1.3 1 0 0 1 1 1 1 zf-RING of BARD1-type protein Prok-RING_4 PF14447.6 ORF61217 - 0.0013 18.5 14.1 0.0023 17.7 14.1 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 ORF61217 - 0.0019 18.5 12.2 0.0053 17.0 12.2 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_10 PF16685.5 ORF61217 - 0.0042 17.2 8.4 0.0074 16.4 8.4 1.4 1 0 0 1 1 1 1 zinc RING finger of MSL2 U-box PF04564.15 ORF61217 - 0.039 14.1 0.1 0.096 12.9 0.1 1.7 1 0 0 1 1 1 0 U-box domain DUF1057 PF06342.12 ORF61217 - 0.055 12.5 0.2 0.075 12.1 0.2 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) zf-RING_4 PF14570.6 ORF61217 - 0.14 12.0 14.1 0.48 10.3 14.0 1.9 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain CGI-121 PF08617.10 ORF61112 - 0.01 16.0 0.0 0.012 15.7 0.0 1.4 1 1 0 1 1 1 0 Kinase binding protein CGI-121 DUF4996 PF16387.5 ORF57898 - 0.037 14.5 0.1 0.096 13.2 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function zf-RING_5 PF14634.6 ORF53827 - 0.0046 16.9 0.2 0.014 15.4 0.2 1.9 1 0 0 1 1 1 1 zinc-RING finger domain YdjO PF14169.6 ORF51782 - 0.062 13.0 0.1 0.062 13.0 0.1 1.9 2 0 0 2 2 2 0 Cold-inducible protein YdjO TLV_coat PF00429.19 ORF48603 - 0.1 11.3 0.2 0.13 10.9 0.2 1.1 1 0 0 1 1 1 0 ENV polyprotein (coat polyprotein) Nmad3 PF18754.1 ORF46933 - 0.042 13.4 0.1 0.06 12.9 0.1 1.2 1 0 0 1 1 1 0 Nucleotide modification associated domain 3 Leo1 PF04004.13 ORF46737 - 1.6e-27 96.4 5.2 4.9e-27 94.8 5.2 1.6 1 1 0 1 1 1 1 Leo1-like protein OTU PF02338.19 ORF41585 - 4.5e-10 40.1 0.0 6.7e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 ORF41585 - 0.0038 16.7 0.0 1.3 8.4 0.0 2.2 2 0 0 2 2 2 2 Peptidase C65 Otubain DUF1980 PF09323.10 ORF39957 - 0.0062 16.5 1.1 0.0092 15.9 0.7 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF1980) BaxI_1 PF12811.7 ORF39957 - 0.57 9.7 12.4 0.66 9.5 11.4 1.5 1 1 0 1 1 1 0 Bax inhibitor 1 like DUF1772 PF08592.11 ORF39957 - 3.4 8.0 12.2 1 9.7 0.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF1772) DUF4034 PF13226.6 ORF38452 - 0.4 10.0 6.1 0.72 9.2 6.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4034) PGM1_C PF18105.1 ORF35719 - 0.77 9.3 3.2 20 4.8 0.0 3.2 3 1 1 4 4 4 0 PGM1 C-terminal domain CTP_transf_like PF01467.26 ORF3540 - 2.4e-37 128.3 0.0 2.8e-37 128.1 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like CxC2 PF18803.1 ORF30980 - 0.85 9.8 7.5 0.048 13.8 2.3 1.6 2 0 0 2 2 2 0 CxC2 like cysteine cluster associated with KDZ transposases CBM_20 PF00686.19 ORF28438 - 3e-06 27.0 0.0 6.6e-06 26.0 0.0 1.6 1 1 0 1 1 1 1 Starch binding domain HydF_tetramer PF18133.1 ORF28438 - 0.1 12.3 0.7 0.26 11.0 0.4 1.9 1 1 1 2 2 2 0 Hydrogen maturase F tetramerization domain SelR PF01641.18 ORF26320 - 2.2e-51 173.0 0.5 4e-51 172.2 0.5 1.4 1 0 0 1 1 1 1 SelR domain SF-assemblin PF06705.11 ORF25432 - 1.6e-19 70.3 11.4 1.8e-19 70.0 11.4 1.0 1 0 0 1 1 1 1 SF-assemblin/beta giardin DUF842 PF05811.13 ORF25432 - 0.014 15.1 1.7 0.014 15.1 1.7 2.2 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF842) Dict-STAT-coil PF09267.10 ORF25432 - 0.015 15.6 6.5 0.021 15.2 0.4 2.4 2 1 0 2 2 2 0 Dictyostelium STAT, coiled coil Gal11_ABD1 PF18535.1 ORF25432 - 0.068 13.3 0.0 0.21 11.7 0.0 1.8 1 0 0 1 1 1 0 Gal11 activator-binding domain (ABD1) Snapin_Pallidin PF14712.6 ORF25432 - 0.08 13.4 8.7 0.29 11.6 1.8 3.2 2 2 0 2 2 2 0 Snapin/Pallidin Phage_Mu_Gam PF07352.12 ORF25432 - 0.46 10.4 9.8 0.27 11.1 2.2 2.3 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein FUSC PF04632.12 ORF25432 - 0.58 8.6 12.2 0.89 8.0 12.2 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Fib_alpha PF08702.10 ORF25432 - 0.63 10.2 10.8 4 7.6 8.1 2.4 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family WAC_Acf1_DNA_bd PF10537.9 ORF25432 - 0.74 10.4 5.5 0.27 11.8 1.5 2.1 1 1 1 2 2 2 0 ATP-utilising chromatin assembly and remodelling N-terminal DUF445 PF04286.12 ORF25432 - 1.1 8.9 9.4 1.6 8.5 9.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) LCIB_C_CA PF18599.1 ORF25432 - 1.2 8.3 5.9 8.3 5.6 1.1 2.1 1 1 0 2 2 2 0 Limiting CO2-inducible proteins B/C beta carbonyic anhydrases PIN_8 PF18476.1 ORF25432 - 1.2 8.9 12.3 99 2.7 12.3 2.1 1 1 0 1 1 1 0 PIN like domain DUF3584 PF12128.8 ORF25432 - 2 5.8 20.6 2.5 5.5 20.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF2405 PF10293.9 ORF25432 - 2.3 8.2 7.0 0.11 12.5 1.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF2405) FeoB_Cyto PF17910.1 ORF25432 - 2.3 8.8 10.1 0.76 10.4 5.0 2.4 1 1 1 2 2 2 0 FeoB cytosolic helical domain DUF724 PF05266.14 ORF25432 - 2.7 7.8 12.9 6.1 6.6 6.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF2570 PF10828.8 ORF25432 - 7 6.5 10.8 1.9 8.4 3.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) FliJ PF02050.16 ORF23731 - 0.012 15.9 1.3 0.11 12.7 0.0 2.3 2 0 0 2 2 2 0 Flagellar FliJ protein TSC22 PF01166.18 ORF23731 - 0.044 14.1 1.4 0.093 13.1 0.7 1.9 1 1 0 1 1 1 0 TSC-22/dip/bun family FlaC_arch PF05377.11 ORF23731 - 0.076 13.4 1.7 0.21 12.0 0.2 2.3 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Spc24 PF08286.11 ORF23731 - 0.37 11.1 4.8 0.24 11.7 1.2 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 DUF5320 PF17253.2 ORF23731 - 2 9.6 3.4 0.74 10.9 0.2 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5320) CCDC-167 PF15188.6 ORF23731 - 2.9 8.3 8.4 1.2 9.5 1.1 2.6 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 167 DUF4585 PF15232.6 ORF20178 - 0.04 14.0 0.2 0.11 12.6 0.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4585) SOG2 PF10428.9 ORF150436 - 0.29 10.3 9.8 0.28 10.3 9.8 1.2 1 0 0 1 1 1 0 RAM signalling pathway protein EF-hand_1 PF00036.32 ORF150111 - 5.4e-25 85.0 17.8 1.2e-05 24.5 0.5 6.1 6 1 0 6 6 6 5 EF hand EF-hand_7 PF13499.6 ORF150111 - 5.9e-21 74.7 21.3 2.1e-09 37.7 1.1 4.5 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 ORF150111 - 1.6e-20 71.2 13.5 0.00073 19.3 0.2 5.7 5 1 0 5 5 5 5 EF-hand domain EF-hand_5 PF13202.6 ORF150111 - 4.7e-19 66.9 12.1 0.0023 17.3 0.1 5.5 5 0 0 5 5 5 5 EF hand EF-hand_8 PF13833.6 ORF150111 - 2.6e-13 49.6 10.7 0.0034 17.2 0.1 5.3 5 0 0 5 5 5 3 EF-hand domain pair EF-hand_10 PF14788.6 ORF150111 - 0.002 17.9 1.2 0.0064 16.3 0.2 2.4 3 0 0 3 3 3 1 EF hand SHOCT PF09851.9 ORF150111 - 0.032 14.0 0.5 5.7 6.8 0.0 3.3 4 0 0 4 4 4 0 Short C-terminal domain EF-hand_4 PF12763.7 ORF150111 - 0.086 12.8 3.5 20 5.2 0.1 3.5 2 2 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand Metallophos_2 PF12850.7 ORF150111 - 0.11 12.7 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Peroxidase_2 PF01328.17 ORF150111 - 0.13 12.8 0.3 0.18 12.3 0.3 1.5 1 1 0 1 1 1 0 Peroxidase, family 2 Caleosin PF05042.13 ORF150111 - 0.15 12.0 2.6 11 5.9 0.0 3.6 2 2 2 4 4 4 0 Caleosin related protein Dockerin_1 PF00404.18 ORF150111 - 0.23 11.7 4.4 0.79 10.0 0.0 3.3 4 0 0 4 4 4 0 Dockerin type I domain DLIC PF05783.11 ORF149773 - 4.4e-29 101.6 1.4 5.2e-29 101.4 1.4 1.1 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) Orthopox_35kD PF02250.15 ORF149773 - 0.005 16.6 0.7 0.0075 16.0 0.7 1.3 1 0 0 1 1 1 1 35kD major secreted virus protein AdenylateSensor PF16579.5 ORF149773 - 0.12 12.8 1.0 0.21 12.0 1.0 1.4 1 0 0 1 1 1 0 Adenylate sensor of SNF1-like protein kinase Iso_dh PF00180.20 ORF146902 - 1.2e-83 281.1 0.0 1.4e-83 280.9 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase ATP-cone PF03477.16 ORF146902 - 0.0047 17.5 0.1 1.4 9.6 0.0 2.3 2 0 0 2 2 2 2 ATP cone domain Ribosomal_L35p PF01632.19 ORF144343 - 3.1 8.3 5.8 1.6 9.3 2.3 2.1 2 0 0 2 2 2 0 Ribosomal protein L35 PTR2 PF00854.21 ORF144084 - 1e-21 77.2 0.0 1.3e-21 76.9 0.0 1.1 1 0 0 1 1 1 1 POT family Sugar_tr PF00083.24 ORF144084 - 0.0013 17.7 0.0 0.0016 17.4 0.0 1.3 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 ORF144084 - 0.087 11.7 3.6 0.17 10.8 3.6 1.6 1 1 0 1 1 1 0 Major Facilitator Superfamily PIG-P PF08510.12 ORF142928 - 0.042 13.8 0.2 0.2 11.6 0.0 1.9 1 1 1 2 2 2 0 PIG-P APG17 PF04108.12 ORF141503 - 0.15 11.2 0.0 0.19 10.8 0.0 1.1 1 0 0 1 1 1 0 Autophagy protein Apg17 Adap_comp_sub PF00928.21 ORF132553 - 6.3e-41 140.5 0.0 7.2e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Adaptor complexes medium subunit family muHD PF10291.9 ORF132553 - 0.0012 18.3 0.0 0.0017 17.9 0.0 1.2 1 0 0 1 1 1 1 Muniscin C-terminal mu homology domain ESSS PF10183.9 ORF128320 - 7.3 6.9 8.9 7.7 6.8 0.1 2.8 3 0 0 3 3 3 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) Heme_oxygenase PF01126.20 ORF126361 - 0.093 12.5 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Heme oxygenase DDHD PF02862.17 ORF126361 - 0.18 11.9 3.4 0.27 11.3 3.4 1.3 1 0 0 1 1 1 0 DDHD domain Goodbye PF17109.5 ORF126361 - 0.24 11.9 2.8 10 6.6 1.4 2.4 2 0 0 2 2 2 0 fungal STAND N-terminal Goodbye domain DTHCT PF08070.11 ORF126361 - 0.35 11.6 8.7 0.6 10.9 8.7 1.4 1 0 0 1 1 1 0 DTHCT (NUC029) region FAST_1 PF06743.15 ORF126047 - 0.12 12.3 0.2 3.8 7.5 0.1 2.4 1 1 1 2 2 2 0 FAST kinase-like protein, subdomain 1 DUF3960 PF13142.6 ORF126047 - 0.17 12.0 0.0 0.32 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3960) Arf PF00025.21 ORF123565 - 1.4e-11 44.1 0.1 2.4e-11 43.4 0.1 1.5 1 1 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 ORF123565 - 1.8e-06 27.5 1.7 3.2e-06 26.7 0.2 2.0 2 1 0 2 2 2 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 ORF123565 - 7.5e-06 26.0 0.2 2.2e-05 24.5 0.2 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 ORF123565 - 0.0011 19.1 0.1 0.031 14.5 0.1 2.3 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 ORF123565 - 0.0049 16.7 0.0 0.83 9.4 0.0 2.1 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein G-alpha PF00503.20 ORF123565 - 0.0058 15.8 2.0 0.01 15.1 2.0 1.6 1 1 0 1 1 1 1 G-protein alpha subunit AAA_22 PF13401.6 ORF123565 - 0.0079 16.5 0.1 0.049 13.9 0.0 2.1 2 1 0 2 2 2 1 AAA domain FeoB_N PF02421.18 ORF123565 - 0.038 13.5 0.1 0.17 11.4 0.2 2.1 2 1 0 2 2 2 0 Ferrous iron transport protein B Ras PF00071.22 ORF123565 - 0.091 12.4 0.0 0.29 10.7 0.0 2.0 2 1 0 2 2 2 0 Ras family AAA_18 PF13238.6 ORF123565 - 0.12 12.9 2.1 0.5 10.9 2.1 2.1 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 ORF123565 - 0.14 11.9 1.3 3.9 7.2 1.3 2.4 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 ORF123565 - 0.19 11.8 0.9 0.79 9.8 0.9 2.1 1 1 0 1 1 1 0 AAA domain DUF3781 PF12636.7 ORF123565 - 4.1 7.3 9.3 1.8 8.5 3.3 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3781) Thioredoxin_6 PF13848.6 ORF122558 - 0.00066 19.6 0.6 0.0013 18.6 0.2 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain MIF4G_like_2 PF09090.11 ORF122558 - 0.0072 15.8 0.6 0.01 15.3 0.6 1.3 1 0 0 1 1 1 1 MIF4G like HLH PF00010.26 ORF122558 - 0.056 13.4 0.0 0.44 10.5 0.0 2.4 2 1 0 2 2 2 0 Helix-loop-helix DNA-binding domain Shisa PF13908.6 ORF122558 - 0.11 12.8 0.0 0.19 12.0 0.0 1.4 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator COG7 PF10191.9 ORF11871 - 8.6e-09 34.2 0.9 1.5e-08 33.4 0.9 1.3 1 0 0 1 1 1 1 Golgi complex component 7 (COG7) GST_C_6 PF17171.4 ORF11871 - 0.15 11.9 0.0 0.3 10.9 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain RabGAP-TBC PF00566.18 ORF117778 - 3.8e-24 85.5 0.4 5.2e-24 85.1 0.4 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain MFS_1 PF07690.16 ORF117611 - 4e-08 32.6 13.0 5.9e-08 32.0 13.0 1.2 1 1 0 1 1 1 1 Major Facilitator Superfamily OSCP PF00213.18 ORF116442 - 8.5e-31 107.4 0.3 1.1e-30 107.1 0.3 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit DUF3333 PF11812.8 ORF116442 - 0.0044 17.2 0.1 0.015 15.5 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF3333) DUF2098 PF09871.9 ORF116442 - 0.12 12.7 0.2 0.24 11.8 0.2 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2098) NAD_binding_10 PF13460.6 ORF113152 - 2e-09 37.6 0.0 3.2e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 NAD(P)H-binding HIM1 PF08732.10 ORF113152 - 2.6e-06 27.0 0.0 4e-06 26.5 0.0 1.2 1 0 0 1 1 1 1 HIM1 Semialdhyde_dh PF01118.24 ORF113152 - 2.7e-06 27.8 0.0 8.8e-06 26.2 0.0 1.9 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Epimerase PF01370.21 ORF113152 - 1.3e-05 24.8 0.0 3.5e-05 23.4 0.0 1.8 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 ORF113152 - 0.00042 19.6 0.0 0.14 11.3 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein DapB_N PF01113.20 ORF113152 - 0.047 13.8 0.0 0.072 13.2 0.0 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus RmlD_sub_bind PF04321.17 ORF113152 - 0.063 12.4 0.0 2.1 7.3 0.0 2.1 2 0 0 2 2 2 0 RmlD substrate binding domain F420H2_quin_red PF04075.14 ORF113152 - 0.1 12.7 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 F420H(2)-dependent quinone reductase Lectin_C PF00059.21 ORF112787 - 2e-16 60.7 2.6 3.2e-16 60.0 2.6 1.3 1 0 0 1 1 1 1 Lectin C-type domain COPR5 PF15340.6 ORF112502 - 1.1 9.9 14.7 0.048 14.3 5.4 2.1 1 1 1 2 2 2 0 Cooperator of PRMT5 family IclR PF01614.18 ORF111718 - 5.9e-42 142.6 0.0 8.9e-42 142.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial transcriptional regulator Arrestin_N PF00339.29 ORF109260 - 9.7e-07 28.9 0.0 1.2e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Rgp1 PF08737.10 ORF109260 - 0.25 10.5 0.4 1.3 8.1 0.0 1.9 1 1 1 2 2 2 0 Rgp1 BPD_transp_1 PF00528.22 ORF107744 - 2.2e-15 56.9 12.7 2.9e-15 56.5 12.7 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component YhfH PF14149.6 ORF107158 - 0.025 14.5 0.1 0.94 9.5 0.3 2.3 2 0 0 2 2 2 0 YhfH-like protein RCC1_2 PF13540.6 ORF106468 - 2e-17 62.5 5.8 0.0012 18.6 0.1 5.4 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat Lipocalin_7 PF14651.6 ORF106468 - 0.0067 16.4 1.1 7.7 6.5 0.0 3.8 1 1 2 4 4 4 2 Lipocalin / cytosolic fatty-acid binding protein family DUF359 PF04019.12 ORF106468 - 0.045 13.4 0.0 5.1 6.7 0.0 3.2 3 1 1 4 4 4 0 Protein of unknown function (DUF359) SNARE_assoc PF09335.11 ORF106436 - 2.9e-06 27.8 1.0 2.9e-06 27.8 1.0 1.9 2 0 0 2 2 2 1 SNARE associated Golgi protein PBP1_TM PF14812.6 ORF106436 - 0.0023 18.2 0.0 0.0041 17.4 0.0 1.4 1 0 0 1 1 1 1 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF2663 PF10864.8 ORF106436 - 0.11 12.9 0.0 0.23 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) Saf_2TM PF18303.1 ORF106436 - 0.58 9.7 0.0 0.58 9.7 0.0 2.4 2 1 0 2 2 2 0 SAVED-fused 2TM effector domain Promethin PF16015.5 ORF106436 - 0.65 9.9 6.7 0.18 11.7 3.3 1.7 1 1 1 2 2 2 0 Promethin DUF2207 PF09972.9 ORF106436 - 2.5 6.8 9.3 1.4 7.6 0.0 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) OrfB_IS605 PF01385.19 ORF105899 - 1.5e-28 99.4 1.4 2.4e-28 98.8 1.4 1.3 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 ORF105899 - 7.6e-25 86.6 1.5 9.7e-25 86.3 0.3 1.8 2 0 0 2 2 2 1 Putative transposase DNA-binding domain RuvC_1 PF18516.1 ORF105899 - 0.0029 16.8 0.5 0.077 12.2 0.3 2.1 2 0 0 2 2 2 1 RuvC nuclease domain HypA PF01155.19 ORF105899 - 0.0071 16.4 0.2 0.014 15.4 0.2 1.7 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ima1_N PF09779.9 ORF105899 - 0.011 16.6 2.8 0.013 16.4 0.5 2.0 2 0 0 2 2 2 0 Ima1 N-terminal domain Ntox28 PF15605.6 ORF105899 - 0.016 15.4 0.1 0.033 14.4 0.1 1.5 1 0 0 1 1 1 0 Bacterial toxin 28 Zn_Tnp_IS1595 PF12760.7 ORF105899 - 0.026 14.5 2.3 0.048 13.6 2.3 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain C1_1 PF00130.22 ORF105899 - 0.039 13.8 0.7 0.096 12.6 0.7 1.6 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Tnp_zf-ribbon_2 PF13842.6 ORF105899 - 0.055 14.3 2.9 0.15 12.9 2.9 1.8 1 0 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon PriA_CRR PF18319.1 ORF105899 - 0.079 13.0 3.8 5.2 7.2 0.9 2.5 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain Curto_V2 PF07325.11 ORF105899 - 0.15 11.9 0.1 0.33 10.8 0.1 1.6 1 1 1 2 2 2 0 Curtovirus V2 protein Rubredoxin_2 PF18073.1 ORF105899 - 0.88 9.4 6.0 1 9.1 0.8 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain DNA_RNApol_7kD PF03604.13 ORF105899 - 1.1 8.9 4.4 9.5 6.0 4.5 2.4 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit AAA PF00004.29 ORF104356 - 1.4e-20 74.1 0.0 2e-20 73.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 ORF104356 - 5.8e-07 29.2 0.1 1.9e-06 27.5 0.1 1.9 2 0 0 2 2 2 1 AAA+ lid domain Vps4_C PF09336.10 ORF104356 - 0.014 15.4 0.0 0.057 13.4 0.0 2.0 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain DUF4637 PF15470.6 ORF101717 - 5.5 6.7 6.5 0.95 9.2 0.1 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4637) IATP PF04568.12 ORF101717 - 9.8 6.7 10.9 1.3 9.4 4.3 2.3 2 1 0 2 2 2 0 Mitochondrial ATPase inhibitor, IATP Cyt-b5 PF00173.28 ORF101403 - 1.8e-06 28.0 0.0 2.8e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Vanabin-2 PF11437.8 ORF10066 - 8.5 6.6 11.8 3.2 8.0 2.0 2.4 2 0 0 2 2 2 0 Vanadium-binding protein 2 cNMP_binding PF00027.29 NODE_32343_length_673_cov_75.597179_g25672_i0reverse_frame_1 - 4.2e-15 55.6 0.0 2.1e-07 30.9 0.0 2.1 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain MRFAP1 PF15155.6 NODE_32337_length_673_cov_98.007837_g25666_i0reverse_frame_1 - 0.0058 17.1 0.1 0.015 15.8 0.1 1.6 1 0 0 1 1 1 1 MORF4 family-associated protein1 MHB PF16525.5 NODE_32337_length_673_cov_98.007837_g25666_i0reverse_frame_1 - 0.12 12.6 1.5 0.46 10.8 1.4 2.2 1 1 0 1 1 1 0 Haemophore, haem-binding SdrG_C_C PF10425.9 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_1 - 0.053 13.6 0.5 0.083 13.0 0.5 1.4 1 0 0 1 1 1 0 C-terminus of bacterial fibrinogen-binding adhesin DAN PF03045.15 NODE_32227_length_675_cov_198.818750_g25566_i0reverse_frame_1 - 7.1 6.7 7.1 0.21 11.6 1.0 1.6 2 0 0 2 2 2 0 DAN domain RCC1_2 PF13540.6 NODE_32227_length_675_cov_198.818750_g25566_i0forward_frame_1 - 0.00034 20.3 6.0 0.16 11.8 0.1 3.5 4 0 0 4 4 4 2 Regulator of chromosome condensation (RCC1) repeat Med3 PF11593.8 NODE_32227_length_675_cov_198.818750_g25566_i0forward_frame_1 - 0.32 10.1 12.6 0.43 9.7 12.6 1.3 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF1610 PF07754.11 NODE_32212_length_676_cov_2.221529_g25557_i0forward_frame_3 - 0.03 14.3 0.0 0.096 12.7 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF1610) Sporozoite_P67 PF05642.11 NODE_32199_length_676_cov_72.109204_g25544_i0reverse_frame_2 - 1.6 6.8 2.4 2.2 6.3 2.4 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Aa_trans PF01490.18 NODE_32199_length_676_cov_72.109204_g25544_i0forward_frame_3 - 1.4e-11 43.8 0.7 1.9e-11 43.4 0.7 1.1 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein HELP PF03451.14 NODE_32193_length_676_cov_104.538222_g25538_i0reverse_frame_3 - 2.2e-25 88.3 0.1 5e-25 87.1 0.0 1.6 2 0 0 2 2 2 1 HELP motif WD40 PF00400.32 NODE_32193_length_676_cov_104.538222_g25538_i0reverse_frame_3 - 6.7e-05 23.6 1.6 0.00032 21.4 0.1 2.4 2 0 0 2 2 2 1 WD domain, G-beta repeat RNase_PH PF01138.21 NODE_32181_length_676_cov_182.257410_g25527_i0reverse_frame_3 - 7.2e-11 42.7 0.0 1.1e-10 42.2 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 Antimicrobial_5 PF08026.11 NODE_32181_length_676_cov_182.257410_g25527_i0reverse_frame_2 - 3.3 7.9 6.2 0.7 10.0 1.5 2.2 2 0 0 2 2 2 0 Bee antimicrobial peptide ERG4_ERG24 PF01222.17 NODE_32177_length_676_cov_281.689548_g25523_i0forward_frame_2 - 1.2 7.8 2.0 1.6 7.4 2.0 1.1 1 0 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks98.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks98.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks98.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks98.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:36:30 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- DUF2298 PF10060.9 NODE_32162_length_677_cov_3.686916_g25511_i0reverse_frame_3 - 0.027 13.2 3.4 0.032 12.9 3.4 1.1 1 0 0 1 1 1 0 Uncharacterized membrane protein (DUF2298) DUF1218 PF06749.12 NODE_32162_length_677_cov_3.686916_g25511_i0reverse_frame_3 - 2.9 8.5 22.2 6.9 7.3 10.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1218) vMSA PF00695.19 NODE_32162_length_677_cov_3.686916_g25511_i0forward_frame_3 - 1.3 8.1 9.9 2.2 7.3 9.9 1.4 1 0 0 1 1 1 0 Major surface antigen from hepadnavirus zinc_ribbon_2 PF13240.6 NODE_32159_length_677_cov_63.448598_g25508_i0reverse_frame_2 - 2.4 8.0 7.3 18 5.2 0.2 2.8 2 0 0 2 2 2 0 zinc-ribbon domain Chromate_transp PF02417.15 NODE_32159_length_677_cov_63.448598_g25508_i0forward_frame_2 - 0.22 11.7 4.2 0.62 10.2 4.1 1.7 1 1 0 1 1 1 0 Chromate transporter ATG16 PF08614.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.00034 20.9 47.3 0.047 13.9 10.3 3.1 1 1 2 3 3 3 3 Autophagy protein 16 (ATG16) CEP63 PF17045.5 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.0012 18.8 19.9 0.0012 18.8 19.9 3.1 1 1 2 3 3 3 1 Centrosomal protein of 63 kDa GIT1_C PF12205.8 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.0068 16.5 4.2 0.0068 16.5 4.2 2.6 2 1 0 2 2 2 1 G protein-coupled receptor kinase-interacting protein 1 C term BST2 PF16716.5 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.01 16.4 12.3 0.01 16.4 12.3 4.1 1 1 2 4 4 4 0 Bone marrow stromal antigen 2 Mod_r PF07200.13 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.035 14.2 43.0 0.14 12.2 18.2 3.0 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein YabA PF06156.13 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.2 12.3 40.8 0.18 12.4 9.6 4.0 1 1 3 4 4 4 0 Initiation control protein YabA Fez1 PF06818.15 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.28 11.6 48.7 0.53 10.7 20.4 2.5 1 1 1 2 2 2 0 Fez1 DHR10 PF18595.1 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.35 10.9 50.4 0.39 10.8 6.4 3.4 1 1 2 3 3 3 0 Designed helical repeat protein 10 domain DUF3450 PF11932.8 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.38 10.0 36.4 0.012 15.0 14.8 2.7 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) FPP PF05911.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.5 8.5 53.8 0.051 11.8 29.3 2.0 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil KASH_CCD PF14662.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.62 9.9 52.8 0.79 9.5 33.9 3.0 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH APG6_N PF17675.1 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 0.99 9.9 57.1 1.3 9.6 12.7 3.0 1 1 2 3 3 3 0 Apg6 coiled-coil region TMF_TATA_bd PF12325.8 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 1.4 9.2 48.7 2.1 8.6 13.4 3.7 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding HMMR_N PF15905.5 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 1.5 8.3 56.4 2.3 7.6 28.8 2.1 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal SlyX PF04102.12 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 1.6 9.4 26.0 0.95 10.1 4.8 4.8 2 1 4 6 6 5 0 SlyX AAA_13 PF13166.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 1.6 7.3 42.6 1.3 7.6 41.2 1.5 1 1 0 1 1 1 0 AAA domain Lebercilin PF15619.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 1.8 8.2 52.8 0.21 11.2 21.7 2.7 1 1 2 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease TPR_MLP1_2 PF07926.12 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 2 8.5 54.8 0.025 14.6 19.4 3.2 1 1 2 3 3 3 0 TPR/MLP1/MLP2-like protein HrpB7 PF09486.10 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 2 8.8 21.5 0.062 13.7 11.1 2.8 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB7) Fib_alpha PF08702.10 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 2.1 8.5 33.7 0.97 9.6 11.2 3.2 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family DUF812 PF05667.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 2.8 6.7 50.5 4.4 6.1 50.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF812) DUF641 PF04859.12 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 3.7 7.9 45.5 0.94 9.8 9.5 4.2 1 1 3 4 4 4 0 Plant protein of unknown function (DUF641) Spc7 PF08317.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 3.8 6.3 53.0 0.14 11.0 27.2 2.7 1 1 2 3 3 3 0 Spc7 kinetochore protein DUF4407 PF14362.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 4.1 6.7 36.2 1.1 8.6 21.8 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) MAD PF05557.13 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 4.9 5.4 50.4 4 5.7 30.5 2.1 1 1 1 2 2 2 0 Mitotic checkpoint protein Rootletin PF15035.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 7.1 6.6 42.1 0.56 10.2 17.2 3.0 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion DUF4200 PF13863.6 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 7.1 7.0 59.0 1.2 9.6 16.1 4.0 1 1 2 3 3 2 0 Domain of unknown function (DUF4200) UPF0242 PF06785.11 NODE_32124_length_678_cov_84.561431_g25479_i0forward_frame_2 - 7.7 6.6 54.3 8.5 6.4 10.5 3.2 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus Apt1 PF10351.9 NODE_32113_length_678_cov_154.457232_g25468_i0reverse_frame_2 - 0.0013 17.7 0.2 0.0016 17.4 0.2 1.1 1 0 0 1 1 1 1 Golgi-body localisation protein domain PFU PF09070.11 NODE_32113_length_678_cov_154.457232_g25468_i0reverse_frame_2 - 0.0074 16.5 0.0 0.029 14.7 0.0 1.8 2 0 0 2 2 2 1 PFU (PLAA family ubiquitin binding) DUF5521 PF17659.1 NODE_32113_length_678_cov_154.457232_g25468_i0reverse_frame_2 - 0.036 11.9 0.0 0.041 11.7 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5521) AAA_25 PF13481.6 NODE_32113_length_678_cov_154.457232_g25468_i0reverse_frame_2 - 0.048 13.2 0.2 0.076 12.6 0.2 1.3 1 0 0 1 1 1 0 AAA domain Zn_ribbon_SprT PF17283.2 NODE_32102_length_678_cov_231.503888_g25459_i0reverse_frame_2 - 0.58 10.1 7.0 7.1 6.6 0.8 2.7 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Spc7_N PF15402.6 NODE_32102_length_678_cov_231.503888_g25459_i0reverse_frame_2 - 7.1 4.7 12.3 8.3 4.5 12.3 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 Ocular_alb PF02101.15 NODE_32100_length_678_cov_303.702955_g25457_i1reverse_frame_2 - 0.026 13.4 0.6 0.039 12.9 0.6 1.3 1 0 0 1 1 1 0 Ocular albinism type 1 protein Stc1 PF12898.7 NODE_32100_length_678_cov_303.702955_g25457_i1forward_frame_2 - 0.26 11.8 4.4 6.4 7.4 0.5 2.8 1 1 1 2 2 2 0 Stc1 domain Stc1 PF12898.7 NODE_32099_length_678_cov_303.743390_g25457_i0reverse_frame_2 - 0.26 11.8 4.4 6.4 7.4 0.5 2.8 1 1 1 2 2 2 0 Stc1 domain Ocular_alb PF02101.15 NODE_32099_length_678_cov_303.743390_g25457_i0forward_frame_2 - 0.026 13.4 0.6 0.039 12.9 0.6 1.3 1 0 0 1 1 1 0 Ocular albinism type 1 protein COMM_domain PF07258.14 NODE_32084_length_678_cov_4644.944012_g25446_i0reverse_frame_2 - 1.8e-08 34.3 0.0 3.5e-08 33.4 0.0 1.5 1 0 0 1 1 1 1 COMM domain DUF996 PF06195.13 ORF97597 - 0.18 12.1 6.4 0.11 12.8 1.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF996) Abhydrolase_9_N PF15420.6 ORF97597 - 0.25 11.3 6.5 0.22 11.5 0.9 2.1 2 0 0 2 2 2 0 Alpha/beta-hydrolase family N-terminus ABC2_membrane_2 PF12679.7 ORF97597 - 0.65 9.2 9.9 0.098 11.9 2.6 2.1 1 1 2 3 3 3 0 ABC-2 family transporter protein Bot1p PF12298.8 ORF96209 - 0.056 13.6 0.0 0.21 11.7 0.0 1.8 2 0 0 2 2 2 0 Eukaryotic mitochondrial regulator protein HXXEE PF13787.6 ORF94230 - 0.00012 22.9 2.0 8.6 7.2 0.1 3.6 3 2 0 3 3 3 3 Protein of unknown function with HXXEE motif Cyclin_C PF02984.19 ORF94230 - 0.00081 19.5 5.3 0.87 9.7 0.2 3.4 1 1 1 3 3 3 2 Cyclin, C-terminal domain DSHCT PF08148.12 ORF94230 - 0.0016 18.2 1.7 15 5.2 0.0 4.0 1 1 3 4 4 4 2 DSHCT (NUC185) domain Tom6 PF17112.5 ORF94230 - 0.038 13.5 11.4 21 4.7 0.1 5.2 5 0 0 5 5 5 0 Mitochondrial import receptor subunit Tom6, fungal Integrase_H2C2 PF17921.1 ORF94230 - 0.042 14.0 0.6 73 3.6 0.0 4.2 5 0 0 5 5 5 0 Integrase zinc binding domain NdhN PF11909.8 ORF94230 - 0.067 12.9 0.2 12 5.5 0.0 2.1 2 0 0 2 2 2 0 NADH-quinone oxidoreductase cyanobacterial subunit N Guanylate_kin PF00625.21 ORF92746 - 1e-47 162.2 1.1 2.2e-39 135.0 0.0 2.0 1 1 1 2 2 2 2 Guanylate kinase ATPase_2 PF01637.18 ORF92746 - 0.00018 21.5 0.6 0.00059 19.8 0.0 1.8 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 ORF92746 - 0.00028 20.9 0.1 0.00064 19.7 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 ORF92746 - 0.00028 21.0 0.0 0.00083 19.4 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase NTPase_1 PF03266.15 ORF92746 - 0.0013 18.7 0.1 0.0027 17.6 0.0 1.5 2 0 0 2 2 2 1 NTPase Septin PF00735.18 ORF92746 - 0.0013 18.0 0.0 0.0043 16.4 0.0 1.9 1 1 0 1 1 1 1 Septin AAA_22 PF13401.6 ORF92746 - 0.0032 17.7 0.2 0.0074 16.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 ORF92746 - 0.0044 17.4 0.1 0.0094 16.3 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_17 PF13207.6 ORF92746 - 0.0056 17.1 0.4 0.03 14.8 0.0 2.2 2 1 0 2 2 2 1 AAA domain DUF5638 PF18688.1 ORF92746 - 0.0066 16.7 1.4 0.013 15.8 1.4 1.6 1 0 0 1 1 1 1 Family of unknown function (DUF5638) ABC_tran PF00005.27 ORF92746 - 0.01 16.4 0.5 0.026 15.0 0.5 1.9 1 1 0 1 1 1 1 ABC transporter AAA_14 PF13173.6 ORF92746 - 0.015 15.4 0.0 0.036 14.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain MnmE_helical PF12631.7 ORF92746 - 0.028 14.6 0.1 0.042 14.0 0.1 1.4 2 0 0 2 2 2 0 MnmE helical domain NB-ARC PF00931.22 ORF92746 - 0.048 12.8 0.4 0.1 11.8 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain NACHT PF05729.12 ORF92746 - 0.055 13.4 0.1 0.17 11.8 0.1 1.8 2 1 0 2 2 2 0 NACHT domain AAA_7 PF12775.7 ORF92746 - 0.11 12.0 0.0 0.23 11.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_18 PF13238.6 ORF92746 - 0.28 11.7 3.1 4.3 7.9 0.2 2.3 2 1 0 2 2 2 0 AAA domain DUF1258 PF06869.12 ORF91585 - 0.14 11.6 0.6 0.29 10.6 0.6 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1258) DUF2256 PF10013.9 ORF91585 - 0.34 11.1 7.9 0.55 10.4 2.3 3.4 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) GST_N_3 PF13417.6 ORF9008 - 4.6e-12 46.2 0.0 9.2e-12 45.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF9008 - 4.9e-09 36.3 0.1 7.8e-09 35.6 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF9008 - 2.3e-08 34.2 0.0 4.4e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF9008 - 1.8e-07 31.3 0.0 2.8e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF9008 - 1.8e-06 28.1 0.0 5.7e-06 26.5 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF9008 - 0.0019 18.2 0.1 0.0046 16.9 0.1 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Synapsin PF02078.16 ORF88267 - 0.14 12.5 0.0 0.22 11.8 0.0 1.3 1 0 0 1 1 1 0 Synapsin, N-terminal domain DUF612 PF04747.12 ORF88267 - 0.24 10.5 9.9 0.016 14.3 5.2 1.4 2 0 0 2 2 2 0 Protein of unknown function, DUF612 DUF612 PF04747.12 ORF8783 - 0.012 14.7 4.7 0.012 14.7 4.7 1.5 2 0 0 2 2 2 0 Protein of unknown function, DUF612 Synapsin PF02078.16 ORF8783 - 0.14 12.5 0.0 0.22 11.8 0.0 1.3 1 0 0 1 1 1 0 Synapsin, N-terminal domain His_Phos_2 PF00328.22 ORF87426 - 0.00071 19.0 1.0 0.001 18.5 1.0 1.3 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) ORC4_C PF14629.6 ORF87426 - 0.028 13.8 1.1 0.029 13.7 0.2 1.5 2 0 0 2 2 2 0 Origin recognition complex (ORC) subunit 4 C-terminus T_cell_tran_alt PF15128.6 ORF87426 - 0.034 14.0 0.0 0.059 13.2 0.0 1.4 1 0 0 1 1 1 0 T-cell leukemia translocation-altered PsaL PF02605.15 ORF86557 - 0.1 12.3 0.4 0.19 11.4 0.4 1.5 1 0 0 1 1 1 0 Photosystem I reaction centre subunit XI Asp PF00026.23 ORF86474 - 8.4e-05 22.1 0.0 0.00012 21.7 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF86474 - 0.075 12.8 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal EphA2_TM PF14575.6 ORF86474 - 0.22 12.4 0.0 0.42 11.5 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Cytochrom_B561 PF03188.16 ORF8492 - 3.1e-10 40.3 4.1 3.1e-10 40.3 4.1 1.5 1 1 0 1 1 1 1 Eukaryotic cytochrome b561 DUF4079 PF13301.6 ORF8492 - 0.024 14.8 13.6 0.35 11.0 2.8 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF4079) MarC PF01914.17 ORF8492 - 0.033 13.6 0.3 0.033 13.6 0.3 2.3 2 1 0 2 2 2 0 MarC family integral membrane protein Sec20 PF03908.13 ORF83816 - 1.1e-06 28.5 1.2 1.1e-06 28.5 1.2 2.5 2 1 0 2 2 2 1 Sec20 Synaptobrevin PF00957.21 ORF83816 - 0.0011 18.7 0.8 0.0011 18.7 0.8 3.3 2 1 2 4 4 4 1 Synaptobrevin HPIH PF13323.6 ORF83816 - 0.0044 16.9 0.1 0.009 15.9 0.1 1.6 1 0 0 1 1 1 1 N-terminal domain with HPIH motif ABC2_membrane_3 PF12698.7 ORF83816 - 0.0083 15.3 5.5 0.02 14.0 5.5 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein DASH_Duo1 PF08651.10 ORF83816 - 0.032 14.0 10.2 0.19 11.6 1.9 3.5 3 1 0 3 3 3 0 DASH complex subunit Duo1 DUF2802 PF10975.8 ORF83816 - 0.034 14.3 0.1 0.034 14.3 0.1 2.9 3 2 0 3 3 2 0 Protein of unknown function (DUF2802) FLILHELTA PF10306.9 ORF83816 - 0.053 13.9 0.9 0.29 11.6 0.1 2.2 2 0 0 2 2 2 0 Hypothetical protein FLILHELTA DUF1786 PF08735.10 ORF83816 - 0.06 12.6 1.4 0.073 12.3 0.3 1.7 2 0 0 2 2 2 0 Putative pyruvate format-lyase activating enzyme (DUF1786) LMBR1 PF04791.16 ORF83816 - 0.087 11.7 8.8 0.1 11.5 8.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein RasGAP_C PF03836.15 ORF83816 - 0.35 11.0 23.1 0.84 9.8 5.2 2.4 1 1 1 2 2 2 0 RasGAP C-terminus DUF1664 PF07889.12 ORF83816 - 0.84 9.7 18.7 0.74 9.9 1.8 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) Arrestin_C PF02752.22 ORF83816 - 0.91 10.0 4.8 0.32 11.4 0.9 2.0 1 1 1 2 2 2 0 Arrestin (or S-antigen), C-terminal domain FeoB_associated PF12669.7 ORF83816 - 2.1 8.8 3.3 4 7.9 3.3 1.5 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein DUF2935 PF11155.8 ORF83816 - 2.2 8.7 11.3 0.93 9.8 5.6 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF2935) DUF5089 PF17002.5 ORF83816 - 2.2 8.1 24.8 2.1 8.1 21.2 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5089) Pex24p PF06398.11 ORF83816 - 2.7 6.9 6.6 28 3.5 6.6 2.1 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin Fzo_mitofusin PF04799.13 ORF83816 - 3.8 7.0 17.2 2.1 7.9 0.3 3.2 1 1 1 3 3 3 0 fzo-like conserved region YtxH PF12732.7 ORF83816 - 5.7 7.5 12.5 5.2e+03 -1.9 12.5 3.6 1 1 0 1 1 1 0 YtxH-like protein Vma12 PF11712.8 ORF83816 - 7.5 6.6 7.4 99 3.0 7.4 2.4 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF724 PF05266.14 ORF83816 - 9.2 6.0 21.8 1.7 8.4 10.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) EamA PF00892.20 ORF83497 - 9.4e-16 58.2 14.9 1.4e-15 57.7 14.9 1.3 1 0 0 1 1 1 1 EamA-like transporter family DUF2784 PF10861.8 ORF8120 - 0.25 11.4 1.2 13 5.9 0.2 2.2 1 1 0 2 2 2 0 Protein of Unknown function (DUF2784) GST_N_3 PF13417.6 ORF80325 - 4.6e-12 46.2 0.0 9.2e-12 45.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF80325 - 4.9e-09 36.3 0.1 7.8e-09 35.6 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF80325 - 2.3e-08 34.2 0.0 4.4e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF80325 - 1.8e-07 31.3 0.0 2.8e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF80325 - 1.8e-06 28.1 0.0 5.7e-06 26.5 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF80325 - 0.0019 18.2 0.1 0.0046 16.9 0.1 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain Afaf PF15339.6 ORF75699 - 0.45 10.2 0.1 0.45 10.2 0.1 1.7 2 0 0 2 2 2 0 Acrosome formation-associated factor DUF1065 PF06358.11 ORF75463 - 0.077 12.9 0.2 0.14 12.1 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1065) PRKG1_interact PF15898.5 ORF75189 - 0.0022 18.9 31.2 0.081 13.8 10.0 2.9 1 1 2 3 3 3 2 cGMP-dependent protein kinase interacting domain HAUS-augmin3 PF14932.6 ORF75189 - 0.01 15.4 12.1 0.01 15.4 12.1 3.0 1 1 2 3 3 3 0 HAUS augmin-like complex subunit 3 SlyX PF04102.12 ORF75189 - 0.022 15.4 8.2 0.022 15.4 8.2 4.0 1 1 3 4 4 4 0 SlyX Syntaxin_2 PF14523.6 ORF75189 - 0.047 14.1 22.4 0.25 11.7 6.3 3.5 1 1 0 3 3 3 0 Syntaxin-like protein TolA_bind_tri PF16331.5 ORF75189 - 0.11 12.6 30.7 1.3 9.1 12.1 3.5 3 1 0 3 3 3 0 TolA binding protein trimerisation GAS PF13851.6 ORF75189 - 0.29 10.5 37.9 0.65 9.3 15.5 3.0 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding MAD PF05557.13 ORF75189 - 0.55 8.5 32.9 0.027 12.8 12.7 2.0 1 1 1 2 2 2 0 Mitotic checkpoint protein DUF547 PF04784.14 ORF75189 - 0.55 10.3 3.2 10 6.2 1.0 2.7 1 1 1 2 2 2 0 Protein of unknown function, DUF547 PKcGMP_CC PF16808.5 ORF75189 - 0.78 9.6 0.0 0.78 9.6 0.0 5.3 4 2 1 5 5 5 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Spc7 PF08317.11 ORF75189 - 1.2 7.9 38.5 1.3 7.8 19.2 2.9 1 1 2 3 3 3 0 Spc7 kinetochore protein Baculo_PEP_C PF04513.12 ORF75189 - 6.5 6.8 7.0 3.3 7.7 2.3 2.4 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus ComP_DUS PF16732.5 ORF75189 - 7.8 7.5 10.5 13 6.7 0.3 3.5 2 1 2 4 4 4 0 Type IV minor pilin ComP, DNA uptake sequence receptor Fez1 PF06818.15 ORF75189 - 8.1 6.9 32.6 11 6.4 13.7 2.1 1 1 1 2 2 2 0 Fez1 UPF0184 PF03670.13 ORF75189 - 9.6 6.7 11.3 0.91 10.0 2.8 3.0 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0184) TMF_DNA_bd PF12329.8 ORF64189 - 0.016 15.2 9.9 0.14 12.2 4.7 3.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding HSP70 PF00012.20 ORF64189 - 0.057 11.6 7.5 0.077 11.2 7.5 1.1 1 0 0 1 1 1 0 Hsp70 protein Sugar_transport PF06800.12 ORF63444 - 4.2e-05 23.0 2.2 7.9e-05 22.1 2.2 1.4 1 0 0 1 1 1 1 Sugar transport protein PAP2_3 PF14378.6 ORF63444 - 0.0039 16.9 1.0 0.0093 15.7 1.0 1.6 1 0 0 1 1 1 1 PAP2 superfamily TMEM144 PF07857.12 ORF63444 - 0.0057 15.7 1.6 0.013 14.5 1.6 1.7 1 1 0 1 1 1 1 Transmembrane family, TMEM144 of transporters Ureide_permease PF07168.11 ORF63444 - 0.023 13.5 9.3 0.013 14.3 5.4 1.9 1 1 1 2 2 2 0 Ureide permease DUF1077 PF06417.12 ORF63444 - 0.57 10.2 4.1 8 6.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1077) PEX11 PF05648.14 ORF59166 - 3.1e-18 66.1 0.4 3.9e-18 65.7 0.4 1.1 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) HSL_N PF06350.12 ORF59166 - 0.026 13.5 0.1 0.036 13.0 0.1 1.2 1 0 0 1 1 1 0 Hormone-sensitive lipase (HSL) N-terminus 2-oxoacid_dh PF00198.23 ORF5616 - 1.3e-80 270.2 0.0 1.4e-80 270.1 0.0 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Rhamnogal_lyase PF06045.11 ORF5616 - 0.045 13.2 0.1 0.23 10.9 0.1 1.9 1 1 1 2 2 2 0 Rhamnogalacturonate lyase family Activator-TraM PF11657.8 ORF52489 - 0.1 12.5 1.8 0.19 11.6 1.7 1.6 1 1 0 1 1 1 0 Transcriptional activator TraM Occludin_ELL PF07303.13 ORF52489 - 0.41 11.4 17.8 0.66 10.7 4.7 3.0 2 1 1 3 3 3 0 Occludin homology domain DUF1664 PF07889.12 ORF52489 - 0.6 10.1 6.2 1.5 8.9 1.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) zf-RING_9 PF13901.6 ORF52489 - 1.4 8.8 7.6 1 9.3 4.7 2.1 1 1 2 3 3 3 0 Putative zinc-RING and/or ribbon MRPL52 PF18699.1 ORF52489 - 2.8 8.2 11.4 0.74 10.0 4.2 2.5 2 0 0 2 2 2 0 Mitoribosomal protein mL52 HIP1_clath_bdg PF16515.5 ORF52489 - 3.3 8.4 15.9 0.19 12.4 3.8 3.3 2 1 2 4 4 4 0 Clathrin-binding domain of Huntingtin-interacting protein 1 SlyX PF04102.12 ORF52489 - 4.9 7.9 12.1 0.097 13.3 1.7 3.0 3 1 1 4 4 4 0 SlyX DUF4407 PF14362.6 ORF52489 - 4.9 6.4 6.0 4.4 6.6 5.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Lzipper-MIP1 PF14389.6 ORF50933 - 0.039 14.3 1.2 0.039 14.3 1.2 2.1 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 DUF4211 PF13926.6 ORF50933 - 0.043 13.9 0.8 0.068 13.2 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4211) Ferritin-like PF12902.7 ORF50933 - 0.18 11.6 3.6 0.3 10.9 0.7 2.0 1 1 1 2 2 2 0 Ferritin-like Syntaxin PF00804.25 ORF50933 - 0.21 11.3 5.0 2.8 7.5 2.5 2.3 1 1 0 2 2 2 0 Syntaxin DUF4665 PF15679.5 ORF50933 - 0.3 11.7 8.1 0.54 10.9 2.9 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4665) TMF_TATA_bd PF12325.8 ORF50933 - 0.33 11.2 6.7 0.13 12.5 1.1 2.8 4 0 0 4 4 4 0 TATA element modulatory factor 1 TATA binding CHD5 PF04420.14 ORF50933 - 0.4 10.5 1.6 23 4.8 0.0 2.4 2 0 0 2 2 2 0 CHD5-like protein HEPN PF05168.14 ORF502 - 0.00012 22.1 0.0 0.00017 21.7 0.0 1.2 1 0 0 1 1 1 1 HEPN domain AroM PF07302.11 ORF49611 - 4.7e-71 238.6 0.6 5.3e-71 238.5 0.6 1.0 1 0 0 1 1 1 1 AroM protein Asp_Glu_race PF01177.22 ORF49611 - 0.041 13.7 0.0 0.28 11.0 0.0 2.1 2 1 0 2 2 2 0 Asp/Glu/Hydantoin racemase UPF0180 PF03698.13 ORF49611 - 0.08 13.1 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) ABC_tran PF00005.27 ORF46336 - 2.8e-11 44.1 0.1 3.9e-11 43.6 0.1 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF46336 - 0.016 14.7 0.2 0.019 14.4 0.2 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain RuvC_1 PF18516.1 ORF46336 - 0.059 12.5 0.2 0.18 10.9 0.2 2.0 1 1 1 2 2 2 0 RuvC nuclease domain Asp PF00026.23 ORF4479 - 8.4e-05 22.1 0.0 0.00012 21.7 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF4479 - 0.075 12.8 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal EphA2_TM PF14575.6 ORF4479 - 0.22 12.4 0.0 0.42 11.5 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Asp PF00026.23 ORF44271 - 8.4e-05 22.1 0.0 0.00012 21.7 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF44271 - 0.075 12.8 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal EphA2_TM PF14575.6 ORF44271 - 0.22 12.4 0.0 0.42 11.5 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain EF-G-binding_N PF07299.11 ORF43132 - 0.048 14.2 1.5 0.14 12.7 1.5 1.8 1 0 0 1 1 1 0 Elongation factor G-binding protein, N-terminal GerE PF00196.19 ORF42837 - 9.1e-16 57.2 0.1 1.7e-15 56.3 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_38 PF13936.6 ORF42837 - 2.5e-05 23.9 0.6 5.4e-05 22.9 0.6 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 ORF42837 - 0.0018 17.9 0.0 0.0037 16.9 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 ORF42837 - 0.0035 16.8 0.1 0.0082 15.6 0.1 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_23 PF13384.6 ORF42837 - 0.083 12.7 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain Terminase_5 PF06056.12 ORF42837 - 0.13 12.2 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) Nuc_sug_transp PF04142.15 ORF4263 - 4.5e-13 49.0 0.1 5.6e-13 48.7 0.1 1.1 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 ORF4263 - 5.3e-05 23.4 2.9 5.3e-05 23.4 2.9 2.5 3 1 0 3 3 3 1 EamA-like transporter family TMEM234 PF10639.9 ORF4263 - 0.00024 21.1 1.0 0.00051 20.1 1.0 1.6 1 0 0 1 1 1 1 Putative transmembrane family 234 TPT PF03151.16 ORF4263 - 0.0022 17.4 1.8 0.003 17.0 1.8 1.2 1 0 0 1 1 1 1 Triose-phosphate Transporter family UAA PF08449.11 ORF4263 - 0.0041 16.4 4.8 0.0055 15.9 4.8 1.4 1 1 0 1 1 1 1 UAA transporter family PhaG_MnhG_YufB PF03334.14 ORF4263 - 0.0056 16.9 2.2 0.0056 16.9 2.2 2.6 2 1 1 3 3 3 1 Na+/H+ antiporter subunit CRT-like PF08627.10 ORF4263 - 0.0095 14.9 7.9 0.085 11.8 7.9 2.1 1 1 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like SLC35F PF06027.12 ORF4263 - 0.012 15.1 4.3 0.026 14.1 4.3 1.6 1 1 0 1 1 1 0 Solute carrier family 35 Multi_Drug_Res PF00893.19 ORF4263 - 0.042 14.5 1.8 0.042 14.5 1.8 2.0 2 0 0 2 2 2 0 Small Multidrug Resistance protein DUF3917 PF13055.6 ORF4263 - 6.8 7.2 9.7 0.63 10.5 3.5 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3917) MORN PF02493.20 ORF41992 - 3.2e-26 89.6 32.2 7.2e-07 28.7 0.4 7.7 7 1 0 7 7 7 5 MORN repeat Kinesin PF00225.23 ORF41381 - 6e-55 186.5 0.1 7.6e-55 186.2 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain TMF_DNA_bd PF12329.8 ORF41381 - 0.012 15.5 0.2 0.012 15.5 0.2 2.0 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Carb_anhydrase PF00194.21 ORF34133 - 1.8e-11 44.1 0.7 3.3e-11 43.2 0.7 1.4 1 1 0 1 1 1 1 Eukaryotic-type carbonic anhydrase Cys_Knot_tox PF17486.2 ORF32463 - 0.027 14.7 1.2 1.7 9.0 0.1 2.6 2 0 0 2 2 2 0 Cystine knot toxins DUF3402 PF11882.8 ORF31024 - 0.014 14.5 0.5 0.015 14.5 0.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3402) DUF3456 PF11938.8 ORF31024 - 0.23 12.0 13.0 0.48 10.9 1.8 3.6 2 1 2 4 4 4 0 TLR4 regulator and MIR-interacting MSAP DHHC PF01529.20 ORF29108 - 2.4e-18 66.6 7.3 2.4e-18 66.6 7.3 1.8 2 0 0 2 2 2 1 DHHC palmitoyltransferase Antigen_Bd37 PF11641.8 ORF28114 - 0.029 13.9 0.0 0.038 13.5 0.0 1.3 1 0 0 1 1 1 0 Glycosylphosphatidylinositol-anchored merozoite surface protein DUF1878 PF08963.10 ORF28114 - 0.075 13.5 0.7 0.19 12.2 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1878) Nitrate_red_gam PF02665.14 ORF26936 - 4e-79 265.2 10.0 4.6e-79 265.0 10.0 1.0 1 0 0 1 1 1 1 Nitrate reductase gamma subunit DUF2407_C PF13373.6 ORF26936 - 0.14 12.4 0.2 0.26 11.5 0.2 1.5 1 0 0 1 1 1 0 DUF2407 C-terminal domain Claudin_2 PF13903.6 ORF26936 - 8.3 6.1 8.3 1.1 9.0 1.2 2.2 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction Asp PF00026.23 ORF21096 - 8.4e-05 22.1 0.0 0.00012 21.7 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 ORF21096 - 0.075 12.8 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal EphA2_TM PF14575.6 ORF21096 - 0.22 12.4 0.0 0.42 11.5 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain GST_N_3 PF13417.6 ORF147232 - 4.6e-12 46.2 0.0 9.2e-12 45.2 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 ORF147232 - 4.9e-09 36.3 0.1 7.8e-09 35.6 0.1 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N PF02798.20 ORF147232 - 2.3e-08 34.2 0.0 4.4e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 ORF147232 - 1.8e-07 31.3 0.0 2.8e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 ORF147232 - 1.8e-06 28.1 0.0 5.7e-06 26.5 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 ORF147232 - 0.0019 18.2 0.1 0.0046 16.9 0.1 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, C-terminal domain mIF3 PF14877.6 ORF146686 - 0.016 14.9 0.8 0.016 14.9 0.8 1.8 2 0 0 2 2 2 0 Mitochondrial translation initiation factor CooT PF10133.9 ORF146686 - 0.046 14.0 0.1 0.14 12.4 0.1 1.8 1 0 0 1 1 1 0 CO dehydrogenase accessory protein CooT LRR_1 PF00560.33 ORF146686 - 0.2 12.3 0.8 1.3 9.9 0.1 2.7 3 0 0 3 3 3 0 Leucine Rich Repeat GrpE PF01025.19 ORF146686 - 0.67 9.6 4.6 0.18 11.4 1.7 1.6 2 0 0 2 2 2 0 GrpE PEX11 PF05648.14 ORF144677 - 3.1e-18 66.1 0.4 3.9e-18 65.7 0.4 1.1 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) HSL_N PF06350.12 ORF144677 - 0.026 13.5 0.1 0.036 13.0 0.1 1.2 1 0 0 1 1 1 0 Hormone-sensitive lipase (HSL) N-terminus WD40 PF00400.32 ORF144221 - 2e-08 34.7 0.4 0.0035 18.2 0.0 4.3 3 1 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF144221 - 0.12 12.7 0.0 0.48 10.8 0.0 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Fer4_23 PF18009.1 ORF144142 - 0.11 12.9 1.0 0.63 10.5 1.0 2.2 1 1 0 1 1 1 0 4Fe-4S iron-sulfur cluster binding domain DUF4483 PF14825.6 ORF143445 - 8e-40 136.2 1.2 1.9e-39 135.0 1.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4483) PMR5N PF14416.6 ORF140922 - 0.035 14.4 0.2 0.035 14.4 0.2 2.7 3 0 0 3 3 3 0 PMR5 N terminal Domain Stc1 PF12898.7 ORF140922 - 0.18 12.3 7.4 0.045 14.3 3.5 2.0 2 1 0 2 2 2 0 Stc1 domain Fimbrial PF00419.20 ORF139534 - 2.9e-25 89.3 11.1 2.9e-25 89.3 11.1 1.8 2 0 0 2 2 2 1 Fimbrial protein FimA PF16970.5 ORF139534 - 0.0005 20.3 13.7 0.002 18.3 9.4 2.8 1 1 1 2 2 2 1 Type-1 fimbrial protein, A Sugarporin_N PF11471.8 ORF139534 - 0.072 13.1 4.5 0.2 11.6 4.5 1.8 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension Lambda_CIII PF02061.16 ORF139386 - 0.046 13.8 0.2 0.12 12.4 0.0 1.8 2 0 0 2 2 2 0 Lambda Phage CIII DUF485 PF04341.12 ORF139070 - 0.32 11.0 6.8 0.73 9.8 6.8 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF485 ARL2_Bind_BART PF11527.8 ORF138744 - 3.9e-06 27.0 0.1 6.7e-06 26.2 0.1 1.3 1 0 0 1 1 1 1 The ARF-like 2 binding protein BART SKI PF01202.22 ORF138579 - 2.1e-56 190.4 0.5 2.7e-56 190.1 0.5 1.1 1 0 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 ORF138579 - 1e-08 35.5 0.0 5.6e-06 26.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 ORF138579 - 9.2e-08 32.7 0.0 1.4e-07 32.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 ORF138579 - 6.5e-06 26.4 0.2 0.00011 22.4 0.2 2.4 1 1 0 1 1 1 1 Cytidylate kinase-like family Cytidylate_kin PF02224.18 ORF138579 - 2.8e-05 24.0 0.3 0.00022 21.0 0.0 2.3 2 1 1 3 3 3 1 Cytidylate kinase dNK PF01712.19 ORF138579 - 3.6e-05 23.7 0.1 0.033 14.0 0.0 2.2 2 0 0 2 2 2 2 Deoxynucleoside kinase TsaE PF02367.17 ORF138579 - 0.00038 20.4 0.0 0.00075 19.5 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 ORF138579 - 0.00046 20.6 0.1 0.001 19.5 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 ORF138579 - 0.0014 19.0 0.0 0.0035 17.8 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 ORF138579 - 0.0023 18.2 0.0 0.0035 17.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_7 PF12775.7 ORF138579 - 0.0032 17.0 0.0 0.0062 16.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region ABC_tran PF00005.27 ORF138579 - 0.0035 17.9 0.2 0.0072 16.8 0.2 1.8 1 1 0 1 1 1 1 ABC transporter APS_kinase PF01583.20 ORF138579 - 0.0042 17.0 0.1 0.0089 15.9 0.1 1.5 1 1 0 1 1 1 1 Adenylylsulphate kinase RsgA_GTPase PF03193.16 ORF138579 - 0.0089 16.0 0.0 0.018 15.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase IstB_IS21 PF01695.17 ORF138579 - 0.0094 15.7 0.0 0.017 14.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein His_biosynth PF00977.21 ORF138579 - 0.01 15.3 0.1 0.014 14.8 0.1 1.2 1 0 0 1 1 1 0 Histidine biosynthesis protein AAA_PrkA PF08298.11 ORF138579 - 0.011 14.6 0.0 0.021 13.8 0.0 1.4 1 0 0 1 1 1 0 PrkA AAA domain AAA_5 PF07728.14 ORF138579 - 0.013 15.5 0.0 0.034 14.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Ploopntkinase3 PF18751.1 ORF138579 - 0.017 15.0 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_17 PF13207.6 ORF138579 - 0.019 15.4 2.6 0.09 13.2 1.2 2.7 1 1 1 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF138579 - 0.023 15.1 0.0 0.047 14.1 0.0 1.6 1 0 0 1 1 1 0 RNA helicase AAA_25 PF13481.6 ORF138579 - 0.023 14.2 0.2 0.12 12.0 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 ORF138579 - 0.028 14.2 0.1 0.053 13.3 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain G-alpha PF00503.20 ORF138579 - 0.028 13.6 0.1 0.045 12.9 0.1 1.3 1 0 0 1 1 1 0 G-protein alpha subunit TniB PF05621.11 ORF138579 - 0.042 13.3 0.2 0.35 10.3 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein PduV-EutP PF10662.9 ORF138579 - 0.05 13.4 0.0 0.17 11.6 0.0 1.8 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_28 PF13521.6 ORF138579 - 0.057 13.6 0.0 0.3 11.3 0.0 2.1 2 1 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 ORF138579 - 0.075 12.3 0.0 0.21 10.9 0.0 1.7 1 0 0 1 1 1 0 Zeta toxin Mg_chelatase PF01078.21 ORF138579 - 0.095 12.1 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 ORF138579 - 0.12 12.0 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 ORF138579 - 0.14 12.1 0.0 0.22 11.4 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain FeoB_associated PF12669.7 ORF135109 - 0.36 11.3 3.8 1.6 9.2 3.8 2.1 1 0 0 1 1 1 0 FeoB-associated Cys-rich membrane protein zf-RING_2 PF13639.6 ORF133687 - 7.2e-08 32.6 15.3 1.1e-07 32.1 15.3 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 ORF133687 - 4.6e-07 29.6 17.0 7.3e-07 28.9 17.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 ORF133687 - 7.4e-07 29.4 9.7 1.6e-06 28.3 9.7 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 ORF133687 - 1.1e-06 28.2 8.4 2.5e-06 27.1 8.4 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_UBOX PF13445.6 ORF133687 - 0.00023 21.1 9.4 0.00046 20.2 9.4 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 ORF133687 - 0.00078 19.3 17.2 0.0013 18.6 17.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 ORF133687 - 0.0032 17.3 13.6 0.0046 16.8 13.6 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) ZapB PF06005.12 ORF133687 - 0.052 14.0 1.0 0.052 14.0 1.0 2.3 2 1 0 2 2 2 0 Cell division protein ZapB zf-ANAPC11 PF12861.7 ORF133687 - 0.086 12.9 5.2 0.15 12.2 5.2 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger CASP_C PF08172.12 ORF133687 - 0.097 12.0 1.7 0.15 11.4 1.7 1.3 1 0 0 1 1 1 0 CASP C terminal zf-Nse PF11789.8 ORF133687 - 0.13 12.1 7.3 0.27 11.1 7.3 1.4 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_5 PF14634.6 ORF133687 - 0.17 11.9 15.2 0.49 10.4 15.4 1.7 1 1 1 2 2 2 0 zinc-RING finger domain Zn_ribbon_17 PF17120.5 ORF133687 - 0.76 9.4 10.2 1.2 8.8 10.2 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type UIM PF02809.20 ORF133687 - 0.88 9.6 5.6 0.52 10.4 2.2 2.2 2 0 0 2 2 2 0 Ubiquitin interaction motif zf-C3HC4_4 PF15227.6 ORF133687 - 7.2 6.9 12.4 18 5.6 12.4 1.7 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING DUF4483 PF14825.6 ORF132827 - 1.9e-39 135.0 1.2 1.9e-39 135.0 1.2 1.6 2 1 0 2 2 2 1 Domain of unknown function (DUF4483) START PF01852.19 ORF132792 - 3.3e-12 46.3 0.0 4.8e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 START domain DUF3074 PF11274.8 ORF132792 - 0.054 13.5 0.0 0.22 11.5 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3074) Synaptobrevin PF00957.21 ORF132776 - 1e-07 31.6 0.5 2.1e-07 30.6 0.5 1.5 1 0 0 1 1 1 1 Synaptobrevin Macro PF01661.21 ORF131389 - 3e-10 40.2 0.0 6.6e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Macro domain Methyltransf_21 PF05050.12 ORF130374 - 9.8e-08 32.2 0.0 1.2e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase FkbM domain DUF2524 PF10732.9 ORF126074 - 0.015 15.6 0.7 0.015 15.6 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2524) G10 PF01125.17 ORF126074 - 0.72 9.6 20.2 0.13 12.0 15.2 2.1 1 1 1 2 2 2 0 G10 protein Presenilin PF01080.17 ORF126074 - 0.72 8.6 1.9 0.81 8.4 1.9 1.3 1 0 0 1 1 1 0 Presenilin Arteri_GP4 PF02497.15 ORF122751 - 0.018 15.2 0.7 0.03 14.5 0.7 1.5 1 1 0 1 1 1 0 Arterivirus glycoprotein RPAP3_C PF13877.6 ORF117952 - 1.8e-08 34.8 0.6 6.3e-08 33.1 0.6 1.8 1 1 0 1 1 1 1 Potential Monad-binding region of RPAP3 Dynein_attach_N PF15867.5 ORF117952 - 0.00057 19.8 0.0 0.0024 17.8 0.0 2.2 1 1 1 2 2 2 1 Dynein attachment factor N-terminus IFRD PF05004.13 ORF117952 - 0.005 16.0 0.4 0.0076 15.4 0.4 1.3 1 0 0 1 1 1 1 Interferon-related developmental regulator (IFRD) Arm_2 PF04826.13 ORF117952 - 0.018 14.5 0.1 0.06 12.8 0.1 1.7 2 0 0 2 2 2 0 Armadillo-like DUF2919 PF11143.8 ORF116058 - 2.7e-47 160.8 8.4 2.7e-47 160.8 8.4 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2919) NDUF_B6 PF09782.9 ORF114894 - 8.4 6.5 6.8 6.5 6.9 1.6 2.4 1 1 1 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit WD40 PF00400.32 ORF11437 - 1.1e-12 48.2 1.2 9.3e-06 26.3 0.0 3.6 4 0 0 4 4 4 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 ORF11437 - 0.03 14.6 0.0 1.2 9.5 0.0 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain PseudoU_synth_2 PF00849.22 ORF111617 - 5.6e-10 39.5 0.0 9.8e-10 38.7 0.0 1.4 1 0 0 1 1 1 1 RNA pseudouridylate synthase EFhand_Ca_insen PF08726.10 ORF111617 - 0.21 11.7 0.0 12 6.1 0.0 2.2 2 0 0 2 2 2 0 Ca2+ insensitive EF hand Isochorismatase PF00857.20 ORF111260 - 1.7e-20 74.0 0.0 2e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family KIAA1430 PF13879.6 ORF108154 - 0.77 10.6 17.4 13 6.6 17.3 2.4 1 1 0 1 1 1 0 KIAA1430 homologue Asn_synthase PF00733.21 ORF106845 - 1.6e-59 202.4 0.9 6.4e-44 151.1 0.0 2.0 1 1 1 2 2 2 2 Asparagine synthase Stealth_CR4 PF17103.5 ORF106845 - 0.0093 15.8 0.0 6.7 6.7 0.1 2.4 2 0 0 2 2 2 2 Stealth protein CR4, conserved region 4 TolB_N PF04052.13 ORF104686 - 0.048 13.8 1.3 2.7 8.2 0.4 2.5 1 1 1 2 2 2 0 TolB amino-terminal domain RR_TM4-6 PF06459.12 ORF104686 - 3.7 7.3 16.8 5 6.9 16.8 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 NPBW PF15180.6 ORF100622 - 0.018 14.9 1.4 0.027 14.3 0.2 1.9 1 1 1 2 2 2 0 Neuropeptides B and W DUF4483 PF14825.6 ORF100393 - 1.9e-39 135.0 1.2 1.9e-39 135.0 1.2 1.6 2 1 0 2 2 2 1 Domain of unknown function (DUF4483) SRTM1 PF15872.5 NODE_32476_length_670_cov_2.554331_g25790_i0forward_frame_1 - 5.5 7.2 7.0 4.8 7.4 0.1 2.4 3 0 0 3 3 3 0 Serine-rich and transmembrane domain-containing protein 1 HSR PF03172.13 NODE_32474_length_670_cov_3.114961_g25788_i0reverse_frame_1 - 0.088 13.0 0.1 0.13 12.4 0.1 1.2 1 0 0 1 1 1 0 HSR domain PAAR_motif PF05488.13 NODE_32474_length_670_cov_3.114961_g25788_i0forward_frame_1 - 0.0077 16.4 1.5 0.018 15.2 1.5 1.7 1 1 0 1 1 1 1 PAAR motif Zip PF02535.22 NODE_32457_length_670_cov_173.656693_g25771_i0forward_frame_1 - 0.99 8.6 5.6 1.2 8.3 5.6 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Sporozoite_P67 PF05642.11 NODE_32457_length_670_cov_173.656693_g25771_i0forward_frame_1 - 1.2 7.1 7.4 1.6 6.7 7.4 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Spot_14 PF07084.12 NODE_32457_length_670_cov_173.656693_g25771_i0forward_frame_1 - 1.3 9.1 8.1 2.2 8.4 8.1 1.4 1 0 0 1 1 1 0 Thyroid hormone-inducible hepatic protein Spot 14 NPR3 PF03666.13 NODE_32444_length_670_cov_552.233071_g25759_i0reverse_frame_1 - 0.49 9.1 3.6 0.51 9.1 3.6 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 CDC45 PF02724.14 NODE_32444_length_670_cov_552.233071_g25759_i0reverse_frame_1 - 0.53 8.5 17.8 0.6 8.3 17.8 1.1 1 0 0 1 1 1 0 CDC45-like protein IFRD_C PF04836.12 NODE_32431_length_671_cov_51.844340_g25749_i0forward_frame_1 - 0.21 12.2 0.1 0.21 12.2 0.1 2.6 3 0 0 3 3 3 0 Interferon-related protein conserved region His_Me_b4a2 PF18275.1 NODE_32392_length_672_cov_1.987441_g25716_i0forward_frame_1 - 0.029 14.4 1.7 0.079 13.0 1.7 1.7 1 0 0 1 1 1 0 His-Me finger endonuclease beta4-alpha2 domain LRR_6 PF13516.6 NODE_32388_length_672_cov_5.221350_g25712_i0forward_frame_1 - 1.5e-15 55.9 24.2 3.3e-05 23.6 0.2 7.8 8 0 0 8 8 8 4 Leucine Rich repeat LRR_4 PF12799.7 NODE_32388_length_672_cov_5.221350_g25712_i0forward_frame_1 - 1.2e-05 25.6 22.2 0.12 12.8 3.5 5.4 2 2 3 5 5 5 5 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 NODE_32388_length_672_cov_5.221350_g25712_i0forward_frame_1 - 1.9e-05 24.5 13.4 5.6 7.9 0.1 6.9 7 1 0 7 7 7 2 Leucine Rich Repeat LRR_8 PF13855.6 NODE_32388_length_672_cov_5.221350_g25712_i0forward_frame_1 - 0.021 14.6 20.9 0.55 10.0 0.8 5.9 3 3 0 3 3 3 0 Leucine rich repeat Lentiviral_Tat PF02998.14 NODE_32388_length_672_cov_5.221350_g25712_i0forward_frame_1 - 0.092 12.8 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 Lentiviral Tat protein DUF4808 PF16066.5 NODE_32347_length_673_cov_3.509404_g25676_i0reverse_frame_3 - 0.03 14.9 0.1 0.31 11.6 0.0 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4808) zinc_ribbon_9 PF14369.6 NODE_32340_length_673_cov_86.865204_g25669_i0forward_frame_3 - 0.022 15.0 1.7 0.095 13.0 1.7 2.1 1 0 0 1 1 1 0 zinc-ribbon KSHV_K8 PF07188.11 NODE_32328_length_673_cov_168.015674_g25657_i0forward_frame_3 - 0.0099 15.3 0.2 0.014 14.8 0.2 1.2 1 0 0 1 1 1 1 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein zf-H2C2_2 PF13465.6 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 1.1e-13 51.0 22.7 3.9e-10 39.7 0.5 4.5 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_6 PF13912.6 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 1.1e-05 25.3 3.2 1.1e-05 25.3 3.2 3.5 3 1 0 3 3 3 1 C2H2-type zinc finger zf-C2H2 PF00096.26 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 3e-05 24.2 0.5 3e-05 24.2 0.5 5.4 5 1 0 5 5 5 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 7.9e-05 23.2 0.7 7.9e-05 23.2 0.7 4.9 6 0 0 6 6 4 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.00061 20.0 0.9 0.00061 20.0 0.9 3.3 3 0 0 3 3 3 1 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.0037 17.0 7.1 0.6 9.9 0.0 2.8 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-met PF12874.7 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.0059 17.0 0.9 0.0059 17.0 0.9 3.4 3 0 0 3 3 3 1 Zinc-finger of C2H2 type Desulfoferrod_N PF06397.12 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.03 13.9 4.5 0.54 9.9 0.3 2.6 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-BED PF02892.15 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.073 13.1 14.7 0.31 11.1 1.6 3.2 1 1 2 3 3 3 0 BED zinc finger zf-Sec23_Sec24 PF04810.15 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.084 12.9 4.9 0.28 11.3 0.3 2.8 3 0 0 3 3 3 0 Sec23/Sec24 zinc finger BolA PF01722.18 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.099 12.9 0.3 0.21 11.9 0.3 1.5 1 0 0 1 1 1 0 BolA-like protein Zn_Tnp_IS91 PF14319.6 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.42 10.7 11.2 1.7 8.7 6.5 2.6 1 1 1 2 2 2 0 Transposase zinc-binding domain Zf_RING PF16744.5 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 0.43 10.7 7.6 3.2 7.9 0.1 2.4 1 1 1 2 2 2 0 KIAA1045 RING finger Zn-ribbon_8 PF09723.10 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 4.4 7.5 11.1 2 8.6 0.2 3.2 2 1 0 2 2 2 0 Zinc ribbon domain zf-AN1 PF01428.16 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_3 - 5.8 7.2 12.2 13 6.0 0.1 3.7 4 0 0 4 4 3 0 AN1-like Zinc finger zf-C2H2 PF00096.26 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_2 - 8.9e-05 22.7 2.2 0.00027 21.2 2.2 1.9 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 NODE_32308_length_674_cov_4.272300_g25641_i0reverse_frame_2 - 0.0087 16.8 1.6 0.04 14.8 1.6 2.3 1 0 0 1 1 1 1 C2H2-type zinc finger DUF5368 PF17336.2 NODE_32264_length_675_cov_3.109375_g25603_i0reverse_frame_3 - 0.079 13.1 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5368) ArsR PF09824.9 NODE_32264_length_675_cov_3.109375_g25603_i0reverse_frame_3 - 0.092 12.3 0.1 0.19 11.3 0.1 1.5 1 1 0 1 1 1 0 ArsR transcriptional regulator DUF4596 PF15363.6 NODE_32264_length_675_cov_3.109375_g25603_i0reverse_frame_3 - 7.3 6.9 7.8 9.3 6.6 0.1 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4596) HIPIP PF01355.17 NODE_32239_length_675_cov_154.057813_g25578_i0reverse_frame_3 - 0.12 12.8 0.0 0.25 11.7 0.0 1.5 1 0 0 1 1 1 0 High potential iron-sulfur protein Ank_2 PF12796.7 NODE_32239_length_675_cov_154.057813_g25578_i0forward_frame_2 - 6.4e-22 77.9 0.4 6.8e-13 49.0 0.3 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 NODE_32239_length_675_cov_154.057813_g25578_i0forward_frame_2 - 1.3e-20 73.2 0.9 1.1e-07 32.0 0.1 3.4 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 NODE_32239_length_675_cov_154.057813_g25578_i0forward_frame_2 - 5e-20 71.6 0.8 1.9e-10 41.0 0.0 2.7 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 NODE_32239_length_675_cov_154.057813_g25578_i0forward_frame_2 - 6.7e-18 64.3 2.8 7.5e-05 23.0 0.1 4.4 4 0 0 4 4 4 3 Ankyrin repeat Ank_3 PF13606.6 NODE_32239_length_675_cov_154.057813_g25578_i0forward_frame_2 - 2.1e-15 55.3 0.1 0.0018 18.6 0.0 4.4 4 0 0 4 4 4 3 Ankyrin repeat GATase_7 PF13537.6 NODE_32239_length_675_cov_154.057813_g25578_i0forward_frame_2 - 0.047 13.6 0.0 37 4.2 0.0 3.0 2 1 1 3 3 3 0 Glutamine amidotransferase domain Hanta_G2 PF01561.16 NODE_32237_length_675_cov_162.414062_g25576_i0forward_frame_2 - 0.051 12.2 0.4 0.069 11.8 0.4 1.1 1 0 0 1 1 1 0 Hantavirus glycoprotein G2 MyTH4 PF00784.17 NODE_32227_length_675_cov_198.818750_g25566_i0reverse_frame_2 - 0.00038 20.9 5.4 0.31 11.5 0.3 2.8 2 1 1 3 3 3 2 MyTH4 domain DUF3864 PF12980.7 NODE_32227_length_675_cov_198.818750_g25566_i0reverse_frame_2 - 0.16 12.3 2.5 4.6 7.6 0.1 2.8 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3864) Exo_endo_phos PF03372.23 ORF95795 - 0.0072 15.9 0.0 0.014 14.9 0.0 1.3 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Receptor_IA-2 PF11548.8 ORF95795 - 0.26 11.3 0.0 0.41 10.6 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase receptor IA-2 4HBT_3 PF13622.6 ORF93037 - 2.7e-29 103.2 3.1 3.1e-29 102.9 3.1 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl_CoA_thio PF02551.15 ORF93037 - 4.6e-24 84.8 0.1 6.2e-24 84.3 0.1 1.1 1 0 0 1 1 1 1 Acyl-CoA thioesterase FAD_binding_3 PF01494.19 ORF92627 - 0.061 12.6 0.1 0.43 9.8 0.0 1.9 1 1 1 2 2 2 0 FAD binding domain Folate_carrier PF01770.18 ORF92355 - 0.12 11.1 1.7 0.12 11.0 0.1 1.6 1 1 1 2 2 2 0 Reduced folate carrier Neur_chan_memb PF02932.16 ORF91800 - 0.38 10.8 5.3 0.46 10.5 5.3 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region START PF01852.19 ORF90048 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF90048 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) Acyl-CoA_dh_1 PF00441.24 ORF89478 - 2.9e-06 27.5 0.1 4.7e-06 26.9 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 ORF89478 - 0.092 13.0 0.2 0.29 11.4 0.0 1.8 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, C-terminal domain Asp PF00026.23 ORF8831 - 5.1e-12 45.8 1.2 6.2e-12 45.6 1.2 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 ORF8831 - 0.0002 21.6 1.4 0.15 12.3 0.2 2.1 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal SipA_VBS PF17985.1 ORF85577 - 0.45 10.5 2.9 0.6 10.1 0.3 2.3 2 0 0 2 2 2 0 SipA vinculin binding site LSM PF01423.22 ORF84 - 3.7e-16 58.6 0.0 5.2e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 LSM domain DUF1846 PF08903.11 ORF82175 - 0.022 13.3 0.1 0.03 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1846) DUF1067 PF06362.11 ORF80753 - 0.047 14.4 0.1 0.1 13.4 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1067) MIG-14_Wnt-bd PF06664.12 ORF80753 - 0.15 11.3 0.7 0.23 10.7 0.7 1.2 1 0 0 1 1 1 0 Wnt-binding factor required for Wnt secretion D_CNTX PF17492.2 ORF78537 - 0.022 14.9 1.4 0.062 13.5 1.4 1.8 1 1 0 1 1 1 0 Delta Ctenitoxins Chitin_bind_1 PF00187.19 ORF78537 - 3.9 8.0 6.7 12 6.5 0.3 3.3 3 0 0 3 3 3 0 Chitin recognition protein START PF01852.19 ORF78534 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF78534 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) Pkinase PF00069.25 ORF77013 - 8.8e-67 225.2 0.0 9.6e-67 225.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF77013 - 3.2e-35 121.7 0.0 3.6e-35 121.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF77013 - 7.4e-06 25.5 0.0 1.1e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 ORF77013 - 0.00018 20.4 0.0 0.00029 19.7 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 ORF77013 - 0.00049 19.5 0.0 0.0014 18.0 0.0 1.7 1 1 0 1 1 1 1 Kinase-like PPTA PF01239.22 ORF77013 - 0.39 10.5 1.8 2.2 8.1 0.1 2.5 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat DUF2491 PF10679.9 ORF7402 - 0.0021 17.2 1.9 0.0034 16.6 1.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2491) BTB PF00651.31 ORF67177 - 5.6e-05 23.3 0.1 0.00013 22.2 0.1 1.7 1 1 0 1 1 1 1 BTB/POZ domain Flu_C_NS2 PF03555.14 ORF66647 - 0.015 15.4 0.3 0.063 13.5 0.3 2.0 2 0 0 2 2 2 0 Influenza C non-structural protein (NS2) AP3D1 PF06375.11 ORF66647 - 3.2 8.0 13.3 0.18 12.0 6.5 1.8 1 1 0 2 2 2 0 AP-3 complex subunit delta-1 Cnn_1N PF07989.11 ORF66647 - 4.3 7.6 12.2 0.12 12.5 1.0 2.5 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 YlqD PF11068.8 ORF66647 - 5.3 7.4 8.8 6.5 7.1 2.8 2.3 2 0 0 2 2 2 0 YlqD protein SH3_9 PF14604.6 ORF66357 - 8.6e-05 22.3 0.0 0.00016 21.5 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 ORF66357 - 0.0066 16.0 0.0 0.01 15.4 0.0 1.3 1 0 0 1 1 1 1 SH3 domain Tom5 PF10642.9 ORF66357 - 0.15 12.1 1.7 0.52 10.4 1.4 2.0 2 0 0 2 2 2 0 Mitochondrial import receptor subunit or translocase Thioredoxin PF00085.20 ORF64670 - 0.075 13.0 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin HyaE PF07449.11 ORF64670 - 0.12 12.4 0.0 0.21 11.6 0.0 1.5 1 1 0 1 1 1 0 Hydrogenase-1 expression protein HyaE PanZ PF12568.8 ORF63476 - 0.14 11.9 0.1 0.21 11.3 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ DHHC PF01529.20 ORF63302 - 7.3e-27 94.1 20.6 7.3e-27 94.1 20.6 2.4 2 1 0 2 2 2 1 DHHC palmitoyltransferase DUF805 PF05656.14 ORF63302 - 0.027 14.9 5.1 0.32 11.4 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF805) START PF01852.19 ORF60981 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF60981 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) Glyco_hydro_47 PF01532.20 ORF60288 - 1.3e-37 129.8 0.0 1.7e-37 129.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 47 Pkinase PF00069.25 ORF58674 - 1.6e-11 44.1 0.0 3e-11 43.2 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Hamartin PF04388.12 ORF58534 - 0.49 9.0 1.8 0.6 8.7 1.8 1.1 1 0 0 1 1 1 0 Hamartin protein Helicase_C PF00271.31 ORF58466 - 9.4e-08 32.4 0.0 1.3e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain PASTA PF03793.19 ORF58466 - 0.14 12.0 0.1 0.26 11.2 0.1 1.4 1 0 0 1 1 1 0 PASTA domain START PF01852.19 ORF58350 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF58350 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) DUF1489 PF07370.11 ORF57084 - 0.14 11.9 0.3 0.23 11.2 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1489) DHHC PF01529.20 ORF56503 - 2.6e-39 134.4 9.3 4.9e-39 133.5 9.3 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase Glycophorin_A PF01102.18 ORF56503 - 0.4 10.9 4.4 6 7.1 0.2 2.2 2 0 0 2 2 2 0 Glycophorin A DUF3687 PF12459.8 ORF56503 - 0.59 9.7 8.6 0.18 11.3 1.1 2.5 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein DUF5115 PF17142.4 ORF55792 - 0.22 11.1 0.0 0.35 10.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5115) 2OG-FeII_Oxy_2 PF13532.6 ORF55609 - 5.2e-19 69.2 0.0 6e-19 69.0 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Phage_Coat_B PF05356.11 ORF55336 - 0.5 10.3 3.7 18 5.3 0.2 2.6 2 0 0 2 2 2 0 Phage Coat protein B Pkinase PF00069.25 ORF50257 - 3.2e-62 210.3 0.0 3.6e-62 210.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF50257 - 1.8e-27 96.2 0.0 2.2e-27 96.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF50257 - 0.0047 16.3 0.1 0.0066 15.8 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF50257 - 0.016 14.2 0.2 0.021 13.8 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF50257 - 0.017 14.5 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like YcxB PF14317.6 ORF50257 - 0.11 12.2 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 YcxB-like protein TPR_9 PF13371.6 ORF47370 - 1.6e-05 24.9 0.1 3.2e-05 24.0 0.1 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 ORF47370 - 7.8e-05 22.3 0.5 0.052 13.4 0.1 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 ORF47370 - 0.00043 20.2 5.7 0.0024 17.8 0.3 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 ORF47370 - 0.23 11.8 3.5 3 8.2 0.2 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Methyltransf_31 PF13847.6 ORF42856 - 2.7e-11 43.5 0.0 3.8e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 ORF42856 - 2.8e-11 43.5 0.0 3.8e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 ORF42856 - 5.4e-11 43.0 0.0 8.3e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 ORF42856 - 8.4e-11 42.4 0.0 1.3e-10 41.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 ORF42856 - 4.9e-07 30.4 0.0 9.5e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 ORF42856 - 0.00036 20.3 0.0 0.00052 19.8 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 ORF42856 - 0.0006 19.4 0.0 0.001 18.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 ORF42856 - 0.00061 19.2 0.0 0.0008 18.8 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TehB PF03848.14 ORF42856 - 0.00071 19.0 0.0 0.0012 18.3 0.0 1.5 1 1 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_32 PF13679.6 ORF42856 - 0.00081 19.4 0.0 0.0013 18.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 ORF42856 - 0.00087 18.8 0.0 0.0011 18.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MetW PF07021.12 ORF42856 - 0.0052 16.4 0.0 0.0071 16.0 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 ORF42856 - 0.024 14.6 0.0 0.05 13.5 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 ORF42856 - 0.04 13.2 0.0 0.051 12.8 0.0 1.4 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase START PF01852.19 ORF42378 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF42378 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) PGK PF00162.19 ORF41306 - 3.2e-60 204.1 0.0 3.8e-60 203.8 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase YwqJ-deaminase PF14431.6 ORF40216 - 0.0043 17.2 0.2 0.0083 16.3 0.2 1.6 1 1 0 1 1 1 1 YwqJ-like deaminase bZIP_2 PF07716.15 ORF40216 - 0.31 11.1 2.1 0.66 10.1 2.1 1.5 1 0 0 1 1 1 0 Basic region leucine zipper Hamartin PF04388.12 ORF36159 - 0.35 9.5 3.9 0.37 9.4 3.9 1.0 1 0 0 1 1 1 0 Hamartin protein START PF01852.19 ORF36047 - 2.6e-11 43.3 0.0 3.1e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 START domain CAP_assoc_N PF14504.6 ORF36047 - 0.029 14.1 0.4 0.054 13.2 0.4 1.5 1 0 0 1 1 1 0 CAP-associated N-terminal DUF2852 PF11014.8 ORF35397 - 0.086 13.0 3.8 0.054 13.6 2.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2852) LodA_N PF17990.1 ORF35397 - 0.94 9.4 4.3 2.9 7.7 4.2 1.8 1 1 0 1 1 1 0 L-Lysine epsilon oxidase N-terminal DUF4407 PF14362.6 ORF35397 - 3.9 6.7 11.5 5.3 6.3 11.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) START PF01852.19 ORF33304 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF33304 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) MFS_1 PF07690.16 ORF33072 - 1.7e-08 33.8 10.1 2.2e-08 33.4 10.1 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily DUF3948 PF13134.6 ORF33072 - 1.5 8.6 5.0 3.2 7.5 5.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3948) MORN PF02493.20 ORF30984 - 4.7e-28 95.4 36.8 1.7e-07 30.7 0.6 6.8 7 0 0 7 7 7 5 MORN repeat DUF3048_C PF17479.2 ORF30984 - 0.0016 18.8 7.4 0.2 12.1 2.4 3.2 1 1 1 2 2 2 2 Protein of unknown function (DUF3048) C-terminal domain DUF448 PF04296.13 ORF30984 - 0.65 9.9 3.1 10 6.1 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF448) START PF01852.19 ORF30717 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF30717 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) Acyltransferase PF01553.21 ORF29072 - 5.4e-07 29.3 0.1 1e-06 28.4 0.1 1.5 1 1 0 1 1 1 1 Acyltransferase vATP-synt_E PF01991.18 ORF27885 - 1.1e-45 155.5 10.0 1.5e-45 155.1 10.0 1.2 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit T3SS_HrpK1 PF16937.5 ORF27885 - 0.044 13.4 0.0 0.076 12.7 0.0 1.3 1 0 0 1 1 1 0 Type III secretion system translocator protein, HrpF Spore_II_R PF09551.10 ORF27885 - 0.9 10.0 5.2 5.9 7.4 1.5 2.3 1 1 1 2 2 2 0 Stage II sporulation protein R (spore_II_R) SBDS_C PF09377.10 ORF27885 - 3.6 7.6 5.8 76 3.4 5.9 2.4 1 1 0 1 1 1 0 SBDS protein C-terminal domain ATG16 PF08614.11 ORF26789 - 0.052 13.8 5.6 0.09 13.0 5.6 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) LRR19-TM PF15176.6 ORF20493 - 0.39 10.8 0.0 0.39 10.8 0.0 2.5 1 1 1 2 2 2 0 Leucine-rich repeat family 19 TM domain DUF2618 PF10940.8 ORF19895 - 0.0075 16.1 0.4 0.027 14.3 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2618) DUF3139 PF11337.8 ORF19238 - 5.6 7.7 7.8 0.93 10.2 0.7 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF3139) CD4-extracel PF09191.10 ORF19035 - 0.039 14.4 0.4 3.9 7.9 0.0 2.5 2 1 0 2 2 2 0 CD4, extracellular MORN PF02493.20 ORF17185 - 1.3e-18 65.6 38.9 1.6e-07 30.8 0.9 7.0 7 0 0 7 7 7 5 MORN repeat PDEase_I PF00233.19 ORF16393 - 1.5e-23 83.8 0.2 7.7e-23 81.5 0.0 2.0 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase FKS1_dom1 PF14288.6 ORF16393 - 0.031 14.6 1.5 7 7.0 1.5 2.4 1 1 1 2 2 2 0 1,3-beta-glucan synthase subunit FKS1, domain-1 AhpC-TSA PF00578.21 ORF16312 - 3.1e-36 124.0 0.0 5.3e-36 123.3 0.0 1.4 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF16312 - 6.4e-16 58.4 0.0 9.7e-16 57.8 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF16312 - 7.4e-11 41.7 0.2 1.4e-10 40.8 0.2 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin START PF01852.19 ORF15340 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF15340 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) Pkinase PF00069.25 ORF150947 - 3.2e-62 210.3 0.0 3.6e-62 210.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 ORF150947 - 1.8e-27 96.2 0.0 2.2e-27 96.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 ORF150947 - 0.0047 16.3 0.1 0.0066 15.8 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 ORF150947 - 0.016 14.2 0.2 0.021 13.8 0.2 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 ORF150947 - 0.017 14.5 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like YcxB PF14317.6 ORF150947 - 0.11 12.2 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 YcxB-like protein BsuBI_PstI_RE_N PF17728.1 ORF149502 - 0.2 11.5 0.1 0.31 10.9 0.1 1.2 1 0 0 1 1 1 0 BsuBI/PstI restriction endonuclease HTH domain DAO PF01266.24 ORF149298 - 6.7e-09 35.8 0.0 9.2e-09 35.3 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase SBP_bac_5 PF00496.22 ORF149298 - 0.0082 15.1 0.0 0.012 14.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Pyr_redox_3 PF13738.6 ORF149298 - 0.037 13.3 0.1 0.055 12.7 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 ORF149298 - 0.13 11.3 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A RNA_pol_Rpc4 PF05132.14 ORF148396 - 2.2e-21 76.8 0.7 2e-18 67.3 0.0 2.6 2 1 1 3 3 3 2 RNA polymerase III RPC4 APOBEC4 PF18775.1 ORF146361 - 0.075 13.2 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 APOBEC4 Focal_AT PF03623.13 ORF146361 - 0.11 12.4 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Focal adhesion targeting region MORN PF02493.20 ORF144296 - 1.4e-18 65.6 38.9 1.6e-07 30.8 0.9 7.0 7 0 0 7 7 7 5 MORN repeat DHHC PF01529.20 ORF143483 - 7.3e-27 94.1 20.6 7.3e-27 94.1 20.6 2.4 2 1 0 2 2 2 1 DHHC palmitoyltransferase DUF805 PF05656.14 ORF143483 - 0.027 14.9 5.1 0.32 11.4 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF805) Ran-binding PF05508.11 ORF143276 - 0.063 12.2 0.0 0.087 11.8 0.0 1.1 1 0 0 1 1 1 0 RanGTP-binding protein START PF01852.19 ORF142001 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF142001 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) LSM PF01423.22 ORF141546 - 3.7e-16 58.6 0.0 5.2e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 LSM domain AhpC-TSA PF00578.21 ORF140475 - 3.1e-36 124.0 0.0 5.3e-36 123.3 0.0 1.4 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 ORF140475 - 6.4e-16 58.4 0.0 9.7e-16 57.8 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 ORF140475 - 7.4e-11 41.7 0.2 1.4e-10 40.8 0.2 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin YSIRK_signal PF04650.17 ORF137922 - 2.6 8.0 3.8 4.6 7.2 3.8 1.4 1 0 0 1 1 1 0 YSIRK type signal peptide QueC PF06508.13 ORF133388 - 0.091 12.2 0.6 0.14 11.6 0.6 1.2 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC ADH_N PF08240.12 ORF133388 - 1.2 9.1 5.7 0.54 10.2 0.6 2.5 2 1 1 3 3 3 0 Alcohol dehydrogenase GroES-like domain UPF0184 PF03670.13 ORF132662 - 0.49 10.8 1.7 25 5.4 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0184) CLAMP PF14769.6 ORF132631 - 0.0093 16.4 0.9 0.017 15.5 0.8 1.6 1 1 0 1 1 1 1 Flagellar C1a complex subunit C1a-32 Herpes_UL52 PF03121.15 ORF132631 - 0.17 11.8 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 Herpesviridae UL52/UL70 DNA primase MORN PF02493.20 ORF123909 - 2.3e-11 42.9 5.7 0.00016 21.3 0.4 3.5 3 0 0 3 3 3 3 MORN repeat START PF01852.19 ORF11930 - 5.5e-11 42.3 0.0 8.8e-11 41.6 0.0 1.3 1 1 0 1 1 1 1 START domain DUF903 PF06004.12 ORF11930 - 0.11 12.4 0.1 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF903) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks99.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks99.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks99.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks99.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:32:04 2019 # [ok] # --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- VPS13_C PF16909.5 ORF125159 - 2.1e-47 161.2 9.2 2.1e-42 144.9 1.2 2.4 2 0 0 2 2 2 2 Vacuolar-sorting-associated 13 protein C-terminal ATG_C PF09333.11 ORF125159 - 2.3e-11 43.9 0.0 5.2e-11 42.7 0.0 1.6 1 0 0 1 1 1 1 Autophagy-related protein C terminal domain Sec5 PF15469.6 ORF113424 - 5.4e-13 49.2 0.0 3.6e-12 46.5 0.0 2.3 3 0 0 3 3 3 1 Exocyst complex component Sec5 Vps51 PF08700.11 ORF113424 - 1.8e-09 37.6 0.5 5.6e-09 36.0 0.1 2.1 2 0 0 2 2 2 1 Vps51/Vps67 Dor1 PF04124.12 ORF113424 - 1.3e-05 24.1 0.0 2.4e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Dor1-like family Urb2 PF10441.9 ORF113424 - 0.082 12.8 0.8 0.2 11.6 0.8 1.7 1 0 0 1 1 1 0 Urb2/Npa2 family F-box-like_2 PF13013.6 ORF113424 - 0.34 10.9 2.5 5.9 6.9 0.0 3.1 3 0 0 3 3 3 0 F-box-like domain Acyl_transf_3 PF01757.22 ORF92217 - 5.2e-19 68.5 48.9 5.2e-19 68.5 48.9 1.6 2 0 0 2 2 2 1 Acyltransferase family ATP-synt_8 PF00895.20 ORF92217 - 0.14 12.6 14.7 0.37 11.3 0.5 5.1 5 0 0 5 5 5 0 ATP synthase protein 8 ATP-synt_I PF03899.15 ORF76726 - 0.04 14.3 1.6 2.6 8.5 0.3 2.3 2 0 0 2 2 2 0 ATP synthase I chain Bestrophin PF01062.21 ORF76726 - 0.071 12.5 0.1 0.13 11.6 0.1 1.5 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel Ion_trans PF00520.31 ORF47577 - 2.3e-18 66.4 23.8 3.4e-18 65.8 23.8 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF47577 - 8e-08 32.1 3.4 8e-08 32.1 3.4 2.1 2 0 0 2 2 2 1 Ion channel cNMP_binding PF00027.29 ORF47577 - 0.0049 16.9 0.0 0.01 15.9 0.0 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain FAP206 PF12018.8 ORF47577 - 0.042 13.3 0.2 0.09 12.3 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function Ion_trans PF00520.31 ORF44487 - 2.3e-18 66.4 23.8 3.4e-18 65.8 23.8 1.2 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 ORF44487 - 8e-08 32.1 3.4 8e-08 32.1 3.4 2.1 2 0 0 2 2 2 1 Ion channel cNMP_binding PF00027.29 ORF44487 - 0.0049 16.9 0.0 0.01 15.9 0.0 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain FAP206 PF12018.8 ORF44487 - 0.042 13.3 0.2 0.09 12.3 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function ERGIC_N PF13850.6 ORF147446 - 0.02 15.2 0.3 0.071 13.5 0.3 2.0 1 0 0 1 1 1 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4064 PF13273.6 ORF147446 - 0.69 10.2 4.0 1.5 9.1 0.3 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4064) Glyco_hydro_38N PF01074.22 ORF130382 - 2.2e-58 197.9 4.7 3.1e-58 197.4 4.7 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Alpha-mann_mid PF09261.11 ORF130382 - 4.4e-15 55.6 0.0 8.9e-15 54.6 0.0 1.5 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro_38C PF07748.13 ORF130382 - 9.8e-15 55.2 0.0 1.7e-14 54.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain MMPL PF03176.15 ORF98728 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF98728 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF98728 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF98728 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF98728 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF98728 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) MMPL PF03176.15 ORF93598 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF93598 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF93598 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF93598 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF93598 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF93598 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) Ephrin_rec_like PF07699.13 ORF71692 - 0.0032 17.2 4.0 0.016 15.0 4.0 2.3 1 0 0 1 1 1 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF71692 - 0.3 11.6 0.2 0.3 11.6 0.2 6.6 6 1 0 6 6 6 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat NCD3G PF07562.14 ORF71692 - 0.64 10.0 7.1 0.21 11.6 3.2 2.3 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR MMPL PF03176.15 ORF61421 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF61421 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF61421 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF61421 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF61421 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF61421 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) MMPL PF03176.15 ORF54072 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF54072 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF54072 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF54072 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF54072 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF54072 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) MMPL PF03176.15 ORF51330 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF51330 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF51330 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF51330 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF51330 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF51330 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) Acyl_transf_3 PF01757.22 ORF5104 - 2.2e-15 56.6 40.9 2.2e-15 56.6 40.9 1.9 2 0 0 2 2 2 1 Acyltransferase family Cytokin_check_N PF10407.9 ORF140254 - 1.1e-06 28.5 0.0 6.2e-05 22.9 0.0 2.7 2 0 0 2 2 2 2 Cdc14 phosphatase binding protein N-terminus Ephrin_rec_like PF07699.13 ORF136606 - 0.0032 17.2 4.0 0.016 15.0 4.0 2.3 1 0 0 1 1 1 1 Putative ephrin-receptor like Chlam_PMP PF02415.17 ORF136606 - 0.3 11.6 0.2 0.3 11.6 0.2 6.6 6 1 0 6 6 6 0 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat NCD3G PF07562.14 ORF136606 - 0.64 10.0 7.1 0.21 11.6 3.2 2.3 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR MMPL PF03176.15 ORF12025 - 2.2e-22 79.5 0.3 3.3e-22 78.9 0.3 1.3 1 0 0 1 1 1 1 MMPL family Wax2_C PF12076.8 ORF12025 - 8.8e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 WAX2 C-terminal domain ACR_tran PF00873.19 ORF12025 - 0.0018 16.0 5.0 0.0026 15.5 5.0 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family MlrC_C PF07171.12 ORF12025 - 0.083 13.1 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 MlrC C-terminus SecD_SecF PF02355.16 ORF12025 - 0.16 11.3 2.8 0.26 10.7 2.8 1.3 1 0 0 1 1 1 0 Protein export membrane protein DUF1304 PF06993.12 ORF12025 - 8.4 6.4 9.3 7.8 6.5 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1304) zf-RING_2 PF13639.6 ORF70518 - 0.013 15.8 0.9 0.013 15.8 0.9 3.1 3 0 0 3 3 3 0 Ring finger domain zf-RING_5 PF14634.6 ORF70518 - 2 8.4 18.4 0.048 13.6 1.4 3.5 3 0 0 3 3 3 0 zinc-RING finger domain Cyt-b5 PF00173.28 ORF47585 - 3e-35 120.2 0.1 1.1e-16 60.7 0.0 2.4 2 0 0 2 2 2 2 Cytochrome b5-like Heme/Steroid binding domain FAD_binding_2 PF00890.24 ORF47585 - 0.00012 21.3 0.0 0.00012 21.3 0.0 1.7 2 0 0 2 2 2 1 FAD binding domain BCL_N PF04714.13 ORF47585 - 0.00085 19.3 5.3 0.29 11.2 0.2 2.5 2 0 0 2 2 2 2 BCL7, N-terminal conserver region KleE PF17394.2 ORF47585 - 0.042 14.1 0.0 0.12 12.5 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized KleE stable inheritance protein HrcA_DNA-bdg PF03444.15 ORF47585 - 0.099 12.3 0.3 16 5.2 0.0 2.6 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding tRNA_edit PF04073.15 ORF147171 - 7.1e-22 77.8 0.5 1.4e-21 76.9 0.5 1.5 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain ProRS-C_1 PF09180.11 ORF147171 - 2.2e-20 72.6 2.4 6.3e-20 71.2 2.4 1.8 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal HGTP_anticodon PF03129.20 ORF147171 - 2.7e-19 69.1 0.2 7.4e-19 67.7 0.2 1.8 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 ORF147171 - 3.4e-16 59.7 0.0 1.4e-15 57.7 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) TERF2_RBM PF16772.5 ORF80284 - 0.0079 15.6 0.0 0.022 14.2 0.0 1.8 1 0 0 1 1 1 1 Telomeric repeat-binding factor 2 Rap1-binding motif Kinesin PF00225.23 ORF144002 - 2.7e-102 342.1 2.4 2.7e-102 342.1 2.4 1.7 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 ORF144002 - 1.4e-22 80.3 0.5 1.4e-22 80.3 0.5 1.9 2 0 0 2 2 2 1 Microtubule binding AAA_7 PF12775.7 ORF144002 - 0.074 12.6 0.0 0.26 10.8 0.0 1.9 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 ORF144002 - 0.14 12.4 1.4 0.27 11.5 0.0 2.2 3 0 0 3 3 3 0 AAA domain DALR_1 PF05746.15 ORF144002 - 0.56 10.4 2.7 0.59 10.3 0.8 2.1 2 0 0 2 2 2 0 DALR anticodon binding domain DUF3858 PF12970.7 ORF144002 - 1.2 9.2 4.7 8.4 6.4 0.1 2.6 2 0 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3858) Glycohydro_20b2 PF14845.6 ORF144002 - 5.4 7.7 10.7 44 4.7 8.9 2.8 2 1 0 2 2 2 0 beta-acetyl hexosaminidase like Atg14 PF10186.9 ORF144002 - 6.8 5.7 11.9 17 4.3 11.9 1.6 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 COX5B PF01215.19 ORF92858 - 3.2e-06 26.8 0.0 6.4e-06 25.9 0.0 1.5 1 0 0 1 1 1 1 Cytochrome c oxidase subunit Vb DUF812 PF05667.11 ORF43058 - 3.8 6.3 61.7 4.1 6.2 20.5 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF812) Mso1_Sec1_bdg PF14475.6 ORF9160 - 0.15 11.7 0.6 56 3.4 0.0 3.6 3 0 0 3 3 3 0 Sec1-binding region of Mso1 ATG16 PF08614.11 ORF90202 - 2e-08 34.7 120.9 0.021 15.1 34.0 6.0 1 1 5 6 6 6 5 Autophagy protein 16 (ATG16) TPR_MLP1_2 PF07926.12 ORF90202 - 0.00018 21.6 124.4 0.074 13.1 22.9 8.3 1 1 5 7 7 7 4 TPR/MLP1/MLP2-like protein Spc7 PF08317.11 ORF90202 - 0.0018 17.2 118.5 0.028 13.3 24.3 5.4 1 1 5 6 6 6 5 Spc7 kinetochore protein DUF724 PF05266.14 ORF90202 - 0.0054 16.6 16.6 0.0054 16.6 16.6 6.4 1 1 6 7 7 6 2 Protein of unknown function (DUF724) OmpH PF03938.14 ORF90202 - 0.011 16.0 3.5 0.011 16.0 3.5 7.3 1 1 7 8 8 7 0 Outer membrane protein (OmpH-like) GAS2 PF02187.17 ORF90202 - 0.083 13.0 0.1 0.44 10.7 0.0 2.3 2 0 0 2 2 2 0 Growth-Arrest-Specific Protein 2 Domain Cast PF10174.9 ORF90202 - 0.17 10.1 104.5 0.15 10.2 19.4 4.3 1 1 3 4 4 4 0 RIM-binding protein of the cytomatrix active zone CALCOCO1 PF07888.11 ORF90202 - 0.17 10.7 108.9 0.26 10.1 34.0 3.8 1 1 2 3 3 3 0 Calcium binding and coiled-coil domain (CALCOCO1) like DUF3584 PF12128.8 ORF90202 - 0.18 9.3 104.4 0.066 10.7 58.9 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3584) WEMBL PF05701.11 ORF90202 - 0.4 9.3 100.1 0.052 12.3 60.4 3.5 1 1 2 3 3 3 0 Weak chloroplast movement under blue light Baculo_PEP_C PF04513.12 ORF90202 - 0.45 10.6 52.3 0.019 15.0 3.1 6.5 2 1 3 6 6 6 0 Baculovirus polyhedron envelope protein, PEP, C terminus APG6_N PF17675.1 ORF90202 - 1 9.9 128.6 0.03 14.9 28.1 6.9 1 1 4 5 5 4 0 Apg6 coiled-coil region MscS_porin PF12795.7 ORF90202 - 1.1 8.8 98.1 0.11 12.1 34.8 4.9 1 1 4 5 5 4 0 Mechanosensitive ion channel porin domain Fez1 PF06818.15 ORF90202 - 1.1 9.7 113.1 0.16 12.4 30.5 5.7 1 1 3 4 4 4 0 Fez1 DUF4201 PF13870.6 ORF90202 - 1.5 8.5 101.6 0.013 15.2 19.2 6.4 1 1 5 6 6 6 0 Domain of unknown function (DUF4201) Vac_Fusion PF02346.16 ORF90202 - 2.9 7.6 11.3 1.8 8.3 0.2 4.7 4 1 1 5 5 5 0 Chordopoxvirus multifunctional envelope protein A27 UPF0242 PF06785.11 ORF90202 - 3.7 7.6 113.3 14 5.8 13.3 5.5 1 1 4 5 5 5 0 Uncharacterised protein family (UPF0242) N-terminus DHR10 PF18595.1 ORF90202 - 6.3 6.9 113.8 0.13 12.4 18.4 8.3 1 1 7 9 9 9 0 Designed helical repeat protein 10 domain DUF4686 PF15742.5 ORF90202 - 9.3 5.3 114.4 1.4 8.0 18.6 3.6 1 1 1 3 3 3 0 Domain of unknown function (DUF4686) Myosin_tail_1 PF01576.19 ORF90202 - 9.6 3.9 118.8 0.019 12.8 48.9 3.3 1 1 3 4 4 4 0 Myosin tail Pepdidase_M14_N PF18027.1 ORF53584 - 1e-15 58.0 0.3 2.1e-15 57.0 0.3 1.5 1 0 0 1 1 1 1 Cytosolic carboxypeptidase N-terminal domain Peptidase_M14 PF00246.24 ORF53584 - 4.6e-13 49.6 0.0 2.4e-12 47.2 0.0 2.3 1 1 0 1 1 1 1 Zinc carboxypeptidase AstE_AspA PF04952.14 ORF53584 - 0.011 14.8 0.0 0.021 13.9 0.0 1.4 1 0 0 1 1 1 0 Succinylglutamate desuccinylase / Aspartoacylase family ABC_membrane_2 PF06472.15 ORF46084 - 2.6e-77 259.9 0.2 4.2e-77 259.2 0.2 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region 2 ABC_tran PF00005.27 ORF46084 - 6.7e-16 59.0 0.0 1.6e-15 57.9 0.0 1.7 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 ORF46084 - 0.00053 19.5 0.2 0.71 9.3 0.0 2.9 3 0 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 ORF46084 - 0.068 13.7 0.0 0.17 12.4 0.0 1.8 1 1 0 1 1 1 0 AAA domain AMP-binding PF00501.28 ORF98110 - 1.2e-86 291.0 0.0 1.5e-86 290.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF98110 - 0.00047 21.1 0.0 0.0011 19.9 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Ion_trans PF00520.31 ORF146421 - 1.9e-23 82.9 14.8 2.7e-23 82.5 14.8 1.2 1 0 0 1 1 1 1 Ion transport protein EF-hand_1 PF00036.32 ORF146421 - 5e-12 44.5 0.2 2.8e-05 23.4 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 ORF146421 - 6.1e-10 39.4 0.0 1.9e-09 37.8 0.0 1.9 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 ORF146421 - 7.3e-09 34.7 0.7 0.0046 16.4 0.1 2.7 2 0 0 2 2 2 2 EF hand EF-hand_6 PF13405.6 ORF146421 - 8.6e-08 31.5 0.1 0.0058 16.5 0.0 3.2 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF146421 - 1.5e-06 27.9 0.5 3.1e-05 23.7 0.1 2.5 1 1 1 2 2 2 2 EF-hand domain pair ATP-synt_8 PF00895.20 ORF146421 - 0.015 15.8 2.2 0.032 14.7 0.1 2.4 2 0 0 2 2 2 0 ATP synthase protein 8 SieB PF14163.6 ORF146421 - 0.095 12.2 1.1 0.14 11.6 0.1 1.7 2 0 0 2 2 2 0 Super-infection exclusion protein B YMF19 PF02326.15 ORF146421 - 0.62 10.9 2.6 4.6 8.1 0.2 2.7 2 0 0 2 2 2 0 Plant ATP synthase F0 Acyl_transf_3 PF01757.22 ORF7901 - 1.4e-17 63.8 50.9 2.9e-17 62.8 50.9 1.5 1 0 0 1 1 1 1 Acyltransferase family tRNA_synt_2f PF02092.17 ORF44565 - 8.2e-216 718.0 0.0 1.2e-215 717.4 0.0 1.3 1 0 0 1 1 1 1 Glycyl-tRNA synthetase beta subunit DALR_1 PF05746.15 ORF44565 - 1e-08 35.4 0.7 3.3e-08 33.7 0.7 1.9 1 0 0 1 1 1 1 DALR anticodon binding domain Peptidase_M1 PF01433.20 ORF103643 - 5.2e-39 134.1 0.0 8.4e-39 133.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 ORF103643 - 9e-22 78.2 0.0 1.4e-21 77.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain Leuk-A4-hydro_C PF09127.11 ORF103643 - 9.8e-13 48.2 0.0 2.4e-12 46.9 0.0 1.7 1 0 0 1 1 1 1 Leukotriene A4 hydrolase, C-terminal Peptidase_M61 PF05299.12 ORF103643 - 0.16 12.3 2.7 3.1 8.2 1.5 3.2 2 1 0 2 2 2 0 M61 glycyl aminopeptidase Lipoxygenase PF00305.19 ORF102868 - 1.8e-08 33.3 0.0 1.1e-07 30.7 0.0 2.1 2 1 0 2 2 2 1 Lipoxygenase DUF2062 PF09835.9 ORF102868 - 9 6.2 11.1 18 5.2 11.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) Na_Ca_ex PF01699.24 ORF41554 - 2.8e-37 128.0 47.2 1.7e-19 70.3 17.2 3.0 3 0 0 3 3 3 2 Sodium/calcium exchanger protein Acyl_transf_3 PF01757.22 ORF30912 - 1.3e-17 63.9 50.9 2.9e-17 62.8 50.9 1.5 1 0 0 1 1 1 1 Acyltransferase family Rhomboid PF01694.22 ORF130241 - 3.5e-07 30.3 19.7 0.0012 18.9 0.9 2.5 2 0 0 2 2 2 2 Rhomboid family RskA PF10099.9 ORF130241 - 0.82 9.9 3.5 1.1 9.6 2.5 1.7 2 0 0 2 2 2 0 Anti-sigma-K factor rskA EF-hand_7 PF13499.6 ORF129003 - 3.9e-11 43.2 0.8 1.1e-10 41.8 0.4 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 ORF129003 - 2.2e-10 39.3 0.2 0.00062 19.1 0.0 3.2 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 ORF129003 - 2.2e-09 36.5 0.1 0.00063 19.5 0.0 2.9 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 ORF129003 - 1.4e-07 31.2 2.0 0.00027 20.7 0.0 3.4 2 1 1 3 3 3 2 EF-hand domain pair Thioredoxin PF00085.20 ORF129003 - 7.4e-06 25.9 0.0 1.7e-05 24.7 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin EF-hand_5 PF13202.6 ORF129003 - 1.1e-05 24.7 0.2 0.15 11.6 0.1 3.3 3 0 0 3 3 3 2 EF hand SPARC_Ca_bdg PF10591.9 ORF129003 - 0.00061 20.1 0.0 0.0012 19.1 0.0 1.4 1 0 0 1 1 1 1 Secreted protein acidic and rich in cysteine Ca binding region Ribosomal_S27e PF01667.17 ORF129003 - 0.001 18.7 0.0 0.001 18.7 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein S27 EF-hand_4 PF12763.7 ORF129003 - 0.31 11.0 1.2 3 7.9 0.2 2.3 1 1 1 2 2 2 0 Cytoskeletal-regulatory complex EF hand Na_Ca_ex PF01699.24 ORF119601 - 2.8e-37 128.0 47.2 1.7e-19 70.3 17.2 3.0 3 0 0 3 3 3 2 Sodium/calcium exchanger protein Cullin PF00888.22 ORF9098 - 2.7e-142 475.5 20.8 2.7e-142 475.5 20.8 1.9 2 0 0 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 ORF9098 - 6.2e-23 80.6 7.0 1.3e-22 79.6 4.7 2.8 2 0 0 2 2 2 1 Cullin protein neddylation domain Mad3_BUB1_I PF08311.12 ORF9098 - 0.062 13.3 1.8 0.18 11.8 0.4 2.6 2 0 0 2 2 2 0 Mad3/BUB1 homology region 1 HTH_27 PF13463.6 ORF9098 - 0.12 12.9 0.1 1.8 9.1 0.0 2.5 2 0 0 2 2 2 0 Winged helix DNA-binding domain Autotransporter PF03797.19 ORF59015 - 8e-45 153.5 30.8 8e-45 153.5 30.8 3.2 2 1 1 3 3 3 1 Autotransporter beta-domain Pertactin PF03212.14 ORF59015 - 1.7e-05 24.7 3.4 1.7e-05 24.7 3.4 2.3 2 0 0 2 2 2 1 Pertactin ORF_2_N PF18492.1 ORF59015 - 0.069 13.4 0.2 0.18 12.0 0.2 1.7 1 0 0 1 1 1 0 Open reading frame 2 N-terminal domain FH2 PF02181.23 ORF127697 - 7.2e-55 186.6 0.0 1e-54 186.1 0.0 1.2 1 0 0 1 1 1 1 Formin Homology 2 Domain ComS PF17584.2 ORF127697 - 0.021 14.3 2.1 2.4 7.7 0.2 2.7 2 0 0 2 2 2 0 Bacillus competence protein S Spc7 PF08317.11 ORF127697 - 0.024 13.5 2.1 0.04 12.8 2.1 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein HATPase_c PF02518.26 ORF109964 - 4.9e-17 62.4 0.1 9.1e-17 61.6 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF109964 - 1.1e-06 28.6 0.0 2.5e-06 27.4 0.0 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain BACK PF07707.15 ORF109964 - 0.041 14.0 0.3 0.29 11.3 0.0 2.5 2 0 0 2 2 2 0 BTB And C-terminal Kelch Ephrin_rec_like PF07699.13 ORF10145 - 8.3e-05 22.3 8.6 0.0043 16.8 1.6 2.7 2 0 0 2 2 2 2 Putative ephrin-receptor like La PF05383.17 ORF10145 - 0.036 14.1 0.8 7.8 6.6 0.6 2.6 2 0 0 2 2 2 0 La domain TEX12 PF15219.6 ORF10145 - 0.066 13.6 0.1 0.21 11.9 0.1 1.8 1 0 0 1 1 1 0 Testis-expressed 12 Sp38 PF07354.12 ORF10145 - 1.7 8.0 16.5 0.38 10.1 2.1 3.2 3 0 0 3 3 3 0 Zona-pellucida-binding protein (Sp38) Peptidase_M16_C PF05193.21 ORF101443 - 3.3e-11 43.5 0.0 8.1e-11 42.3 0.0 1.6 1 0 0 1 1 1 1 Peptidase M16 inactive domain HTH_37 PF13744.6 ORF101443 - 0.13 12.2 0.7 0.45 10.5 0.2 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain FAM91_N PF14647.6 ORF68096 - 0.015 14.6 0.6 0.029 13.6 0.6 1.4 1 0 0 1 1 1 0 FAM91 N-terminus UCH PF00443.29 ORF68096 - 0.073 12.5 0.0 0.11 12.0 0.0 1.6 1 1 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase HSP70 PF00012.20 ORF47002 - 1.8e-263 875.2 10.8 2.1e-263 875.0 10.8 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF47002 - 1.8e-18 66.5 0.2 5.7e-17 61.5 0.1 2.2 2 0 0 2 2 2 1 MreB/Mbl protein BcrAD_BadFG PF01869.20 ORF47002 - 3.5e-05 23.5 0.1 0.06 12.8 0.0 2.5 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family FGGY_C PF02782.16 ORF47002 - 0.033 13.9 0.0 0.11 12.2 0.0 1.9 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain CSN7a_helixI PF18392.1 ORF47002 - 6 6.8 7.0 2.2 8.2 3.1 2.1 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain Lig_chan PF00060.26 ORF146467 - 3.1e-13 49.8 0.2 5e-13 49.1 0.2 1.3 1 0 0 1 1 1 1 Ligand-gated ion channel DUF2649 PF10854.8 ORF146467 - 0.052 13.9 1.7 0.17 12.2 0.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2649) RVT_1 PF00078.27 ORF77070 - 6.2e-06 25.9 0.0 9.8e-06 25.2 0.0 1.4 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) GD_AH_C PF04295.13 ORF40657 - 1.5e-146 488.2 0.0 1.8e-146 487.9 0.0 1.1 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus PrlF_antitoxin PF15937.5 ORF40657 - 5.2e-37 126.2 0.0 1e-36 125.2 0.0 1.5 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin SAF PF08666.12 ORF40657 - 1.4e-13 51.3 1.0 4e-13 49.8 0.3 2.1 2 0 0 2 2 2 1 SAF domain DUF1570 PF07607.11 ORF144112 - 0.058 13.7 0.3 1.6 9.1 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1570) FAD_binding_3 PF01494.19 ORF101376 - 2.8e-81 273.5 0.0 3.6e-81 273.1 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 ORF101376 - 1e-05 24.9 0.0 0.01 15.1 0.0 2.6 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 ORF101376 - 0.00018 22.0 0.0 0.00063 20.3 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 ORF101376 - 0.0008 18.8 0.0 0.012 14.9 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 ORF101376 - 0.002 16.9 0.5 0.0099 14.6 0.5 1.9 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 ORF101376 - 0.0044 17.2 1.4 0.024 14.9 0.0 2.8 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain 2-Hacid_dh_C PF02826.19 ORF101376 - 0.011 15.0 0.0 1 8.7 0.0 2.9 3 0 0 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thi4 PF01946.17 ORF101376 - 0.06 12.6 0.1 0.1 11.9 0.1 1.2 1 0 0 1 1 1 0 Thi4 family TrkA_N PF02254.18 ORF101376 - 0.083 13.2 0.0 0.18 12.0 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain Lycopene_cycl PF05834.12 ORF101376 - 0.16 11.0 0.4 0.58 9.1 0.2 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein UDPG_MGDP_dh_N PF03721.14 ORF101376 - 0.21 11.2 0.4 0.33 10.5 0.4 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF4116 PF13475.6 ORF90103 - 5.9e-25 86.7 0.0 7.5e-08 32.0 0.0 5.4 2 1 2 5 5 5 5 Domain of unknown function (DUF4116) KR PF08659.10 ORF90103 - 0.00046 20.2 0.0 0.0013 18.7 0.0 1.7 1 0 0 1 1 1 1 KR domain Macro PF01661.21 ORF146909 - 3.3e-30 104.5 0.1 3.3e-30 104.5 0.1 2.9 3 1 0 3 3 3 1 Macro domain PMEI PF04043.15 ORF146909 - 0.018 15.4 0.4 0.28 11.5 0.4 2.7 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor Pilt PF15453.6 ORF146909 - 0.14 11.5 1.3 0.24 10.8 1.3 1.3 1 0 0 1 1 1 0 Protein incorporated later into Tight Junctions DUF2312 PF10073.9 ORF146909 - 0.18 11.5 0.1 0.18 11.5 0.1 4.6 3 1 2 5 5 5 0 Uncharacterized protein conserved in bacteria (DUF2312) FliE PF02049.18 ORF146909 - 0.39 10.9 3.5 1.4 9.1 3.5 2.0 1 0 0 1 1 1 0 Flagellar hook-basal body complex protein FliE DUF4407 PF14362.6 ORF146909 - 1.1 8.5 10.3 0.64 9.3 7.6 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 ORF146909 - 1.2 8.4 29.1 0.26 10.5 9.2 3.2 3 0 0 3 3 3 0 TMPIT-like protein DUF948 PF06103.11 ORF146909 - 1.5 9.1 8.3 1.9 8.8 0.5 4.3 3 2 1 4 4 4 0 Bacterial protein of unknown function (DUF948) FlaC_arch PF05377.11 ORF146909 - 2.2 8.7 15.3 23 5.4 0.8 5.1 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) DUF2203 PF09969.9 ORF146909 - 4.2 8.1 19.2 0.98 10.2 0.5 4.6 2 2 1 4 4 4 0 Uncharacterized conserved protein (DUF2203) AMP-binding PF00501.28 ORF133161 - 7.2e-91 304.9 0.0 9.7e-91 304.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF133161 - 0.00057 20.8 0.0 0.0013 19.7 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain IFP_35_N PF07334.13 ORF133161 - 0.21 11.6 3.7 2.6 8.2 0.3 3.0 3 0 0 3 3 3 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Caprin-1_dimer PF18293.1 ORF132798 - 0.026 15.0 3.0 2.6 8.5 2.0 2.7 2 0 0 2 2 2 0 Caprin-1 dimerization domain Matrilin_ccoil PF10393.9 ORF132798 - 0.13 12.2 1.4 0.65 9.9 0.2 2.5 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin PQQ_3 PF13570.6 ORF132798 - 0.15 12.6 0.2 26 5.5 0.1 2.5 2 0 0 2 2 2 0 PQQ-like domain DASH_Dam1 PF08653.10 ORF132798 - 1.9 8.3 9.0 10 6.0 0.1 3.8 4 0 0 4 4 4 0 DASH complex subunit Dam1 CC2-LZ PF16516.5 ORF132798 - 6.8 7.1 10.5 5.9 7.3 0.3 3.0 2 1 1 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Baculo_PEP_C PF04513.12 ORF27872 - 0.58 10.2 4.2 0.74 9.9 0.0 2.8 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DOCK-C2 PF14429.6 ORF141350 - 0.00073 19.4 0.0 0.5 10.1 0.0 2.7 3 0 0 3 3 3 2 C2 domain in Dock180 and Zizimin proteins SKG6 PF08693.10 ORF137095 - 6.1 6.3 6.1 0.5 9.8 0.6 2.0 2 0 0 2 2 2 0 Transmembrane alpha-helix domain HALZ PF02183.18 ORF133093 - 5.1e-05 23.4 42.8 0.00049 20.3 0.4 7.8 7 1 0 7 7 7 2 Homeobox associated leucine zipper MbeD_MobD PF04899.12 ORF133093 - 0.00029 20.9 7.0 0.4 10.8 0.3 3.7 2 1 1 3 3 3 1 MbeD/MobD like U-box PF04564.15 ORF133093 - 0.00038 20.6 0.0 0.0021 18.2 0.0 2.3 1 0 0 1 1 1 1 U-box domain YabA PF06156.13 ORF133093 - 0.00064 20.3 57.0 0.0069 17.0 5.7 5.3 2 1 2 5 5 5 3 Initiation control protein YabA ADIP PF11559.8 ORF133093 - 0.0019 18.3 63.8 0.04 14.0 16.8 4.8 1 1 2 3 3 3 2 Afadin- and alpha -actinin-Binding PRKG1_interact PF15898.5 ORF133093 - 0.0022 18.9 11.2 0.0022 18.9 11.2 4.8 2 1 3 5 5 5 2 cGMP-dependent protein kinase interacting domain Spc7 PF08317.11 ORF133093 - 0.0054 15.7 21.8 0.0054 15.7 21.8 2.8 2 1 1 3 3 3 1 Spc7 kinetochore protein KASH_CCD PF14662.6 ORF133093 - 0.0073 16.2 13.7 0.0073 16.2 13.7 3.9 2 1 2 4 4 4 1 Coiled-coil region of CCDC155 or KASH DivIC PF04977.15 ORF133093 - 0.0073 16.1 2.7 0.0073 16.1 2.7 7.0 2 2 3 6 6 6 2 Septum formation initiator ZapB PF06005.12 ORF133093 - 0.01 16.3 60.1 0.22 12.0 7.3 5.7 1 1 3 4 4 3 0 Cell division protein ZapB zf-RING_UBOX PF13445.6 ORF133093 - 0.015 15.3 0.0 0.034 14.2 0.0 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf_CCCH_4 PF18345.1 ORF133093 - 0.1 12.7 4.0 0.2 11.8 4.0 1.5 1 0 0 1 1 1 0 Zinc finger domain MerR-DNA-bind PF09278.11 ORF133093 - 0.21 12.1 1.4 18 5.9 0.1 3.3 2 0 0 2 2 2 0 MerR, DNA binding LPP PF04728.13 ORF133093 - 0.26 11.7 27.1 0.076 13.4 0.8 6.0 3 2 2 5 5 5 0 Lipoprotein leucine-zipper TSC22 PF01166.18 ORF133093 - 0.35 11.2 41.9 0.61 10.4 1.1 6.2 6 1 1 7 7 6 0 TSC-22/dip/bun family FUSC PF04632.12 ORF133093 - 0.38 9.2 0.1 0.58 8.6 0.1 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family NRBF2 PF08961.10 ORF133093 - 0.46 10.1 44.2 0.76 9.4 4.0 4.3 1 1 2 3 3 3 0 Nuclear receptor-binding factor 2, autophagy regulator zf-CCCH PF00642.24 ORF133093 - 0.62 10.0 2.9 1.1 9.2 2.9 1.5 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) TPR_MLP1_2 PF07926.12 ORF133093 - 6.8 6.8 54.0 2.2 8.4 10.2 4.9 1 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein DUF948 PF06103.11 ORF133093 - 6.9 7.0 13.3 5.1 7.4 2.3 2.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) PikAIV_N PF18605.1 ORF133093 - 8.2 6.1 8.7 24 4.6 0.5 4.3 3 1 2 5 5 5 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain HSP70 PF00012.20 ORF111804 - 1.8e-263 875.2 10.8 2e-263 875.0 10.8 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 ORF111804 - 1.8e-18 66.5 0.2 5.7e-17 61.5 0.1 2.2 2 0 0 2 2 2 1 MreB/Mbl protein BcrAD_BadFG PF01869.20 ORF111804 - 3.4e-05 23.5 0.1 0.059 12.8 0.0 2.5 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family FGGY_C PF02782.16 ORF111804 - 0.033 13.9 0.0 0.11 12.2 0.0 1.9 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain CSN7a_helixI PF18392.1 ORF111804 - 6 6.9 7.0 2.2 8.2 3.1 2.1 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain TPR_7 PF13176.6 ORF76537 - 1e-10 40.8 3.3 0.16 12.0 0.1 6.2 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 ORF76537 - 2e-07 31.2 5.7 0.61 10.4 0.0 6.8 6 1 0 7 7 7 1 Tetratricopeptide repeat TPR_2 PF07719.17 ORF76537 - 4.9e-07 29.4 12.8 0.66 10.2 0.0 7.0 7 2 1 9 9 8 2 Tetratricopeptide repeat Clathrin PF00637.20 ORF76537 - 2.7e-06 27.3 13.6 0.00018 21.4 1.6 4.9 3 1 2 5 5 5 2 Region in Clathrin and VPS TPR_1 PF00515.28 ORF76537 - 2.3e-05 24.0 16.3 0.65 9.9 0.1 6.1 6 1 1 7 7 6 4 Tetratricopeptide repeat TPR_14 PF13428.6 ORF76537 - 0.00012 22.6 1.2 5.7 8.0 0.0 5.6 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_8 PF13181.6 ORF76537 - 0.00036 20.5 14.3 3.1 8.2 0.1 7.5 7 1 1 8 8 7 1 Tetratricopeptide repeat TPR_19 PF14559.6 ORF76537 - 0.00054 20.4 8.4 4.1 8.0 2.5 5.7 4 2 0 4 4 4 1 Tetratricopeptide repeat Nic96 PF04097.14 ORF76537 - 0.00063 18.3 3.6 0.23 9.9 0.1 3.9 2 1 3 5 5 5 3 Nup93/Nic96 TPR_MalT PF17874.1 ORF76537 - 0.023 14.1 0.7 7 5.9 0.0 2.7 3 0 0 3 3 3 0 MalT-like TPR region ANAPC3 PF12895.7 ORF76537 - 0.033 14.4 6.1 15 5.9 0.0 5.5 4 2 2 6 6 6 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 ORF76537 - 0.067 13.1 10.7 1.3 9.0 0.2 4.8 6 0 0 6 6 6 0 Tetratricopeptide repeat Ribosomal_60s PF00428.19 ORF76537 - 0.16 12.6 4.2 0.41 11.3 4.2 1.7 1 0 0 1 1 1 0 60s Acidic ribosomal protein TPR_16 PF13432.6 ORF76537 - 0.2 12.4 3.8 34 5.2 0.0 3.9 4 0 0 4 4 3 0 Tetratricopeptide repeat UBZ_FAAP20 PF15750.5 ORF76537 - 1.5 8.8 5.1 0.54 10.3 1.4 2.2 2 0 0 2 2 2 0 Ubiquitin-binding zinc-finger TPR_6 PF13174.6 ORF76537 - 1.7 9.4 8.6 62 4.6 0.2 5.7 7 0 0 7 7 5 0 Tetratricopeptide repeat MIT PF04212.18 ORF76537 - 6.9 6.8 17.3 13 6.0 0.0 5.2 5 0 0 5 5 4 0 MIT (microtubule interacting and transport) domain SKG6 PF08693.10 ORF99188 - 6.7 6.2 6.1 0.5 9.8 0.6 2.0 2 0 0 2 2 2 0 Transmembrane alpha-helix domain DUF475 PF04332.15 ORF10382 - 0.0045 16.8 0.2 0.0089 15.8 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF475) NatB_MDM20 PF09797.9 ORF93693 - 6.1e-27 94.5 0.0 1.1e-26 93.7 0.0 1.4 1 0 0 1 1 1 1 N-acetyltransferase B complex (NatB) non catalytic subunit CHAD PF05235.14 ORF93693 - 0.012 15.7 4.0 0.08 12.9 0.0 2.8 2 1 0 2 2 2 0 CHAD domain FCD PF07729.12 ORF93693 - 0.046 14.2 3.6 1.3 9.5 0.1 3.7 4 0 0 4 4 4 0 FCD domain YkyA PF10368.9 ORF93693 - 0.097 12.3 1.8 0.2 11.3 1.8 1.4 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein EF-hand_1 PF00036.32 ORF92705 - 2e-21 73.9 2.1 0.00019 20.8 0.0 6.0 5 0 0 5 5 5 5 EF hand EF-hand_6 PF13405.6 ORF92705 - 4.6e-21 72.9 2.3 0.00013 21.7 0.0 6.3 6 0 0 6 6 6 4 EF-hand domain EF-hand_7 PF13499.6 ORF92705 - 2.5e-20 72.7 7.1 7e-06 26.4 0.0 5.2 3 1 2 5 5 5 5 EF-hand domain pair EF-hand_8 PF13833.6 ORF92705 - 8.6e-09 35.1 5.6 0.021 14.7 0.1 5.2 5 0 0 5 5 5 2 EF-hand domain pair EF-hand_9 PF14658.6 ORF92705 - 4e-07 30.2 0.0 0.0055 17.0 0.0 3.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 ORF92705 - 4.6e-06 25.9 3.4 0.34 10.5 0.0 5.2 5 0 0 5 5 5 2 EF hand EF-hand_4 PF12763.7 ORF92705 - 0.00025 20.9 0.8 0.02 14.8 0.0 3.3 2 1 1 3 3 3 1 Cytoskeletal-regulatory complex EF hand HIM1 PF08732.10 ORF92705 - 0.046 13.3 0.0 0.087 12.3 0.0 1.4 1 0 0 1 1 1 0 HIM1 DUF4795 PF16043.5 ORF85039 - 0.00031 20.4 11.9 0.031 13.9 0.3 4.4 2 1 1 3 3 3 2 Domain of unknown function (DUF4795) Med9 PF07544.13 ORF85039 - 0.022 14.8 0.1 0.022 14.8 0.1 5.0 4 1 1 5 5 5 0 RNA polymerase II transcription mediator complex subunit 9 Baculo_PEP_C PF04513.12 ORF85039 - 0.2 11.7 9.8 72 3.4 0.0 5.8 6 0 0 6 6 6 0 Baculovirus polyhedron envelope protein, PEP, C terminus AHSP PF09236.10 ORF85039 - 0.28 11.6 1.3 1 9.8 0.2 2.6 2 0 0 2 2 1 0 Alpha-haemoglobin stabilising protein Spc29 PF17082.5 ORF85039 - 0.29 10.9 13.0 0.67 9.8 0.0 3.9 4 1 0 4 4 4 0 Spindle Pole Component 29 MtrG PF04210.13 ORF85039 - 0.76 9.7 2.7 20 5.2 0.3 3.5 4 0 0 4 4 4 0 Tetrahydromethanopterin S-methyltransferase, subunit G DUF2730 PF10805.8 ORF85039 - 1.1 9.4 15.9 2.9 8.0 0.2 5.3 5 1 1 6 6 6 0 Protein of unknown function (DUF2730) DUF5398 PF17376.2 ORF85039 - 1.6 9.4 7.8 0.22 12.2 1.3 2.9 3 0 0 3 3 3 0 Family of unknown function (DUF5398) GlutR_dimer PF00745.20 ORF85039 - 1.8 9.1 8.9 6.9 7.2 0.2 3.5 3 0 0 3 3 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain DUF948 PF06103.11 ORF85039 - 2.8 8.3 13.6 34 4.8 0.0 5.8 5 2 1 6 6 6 0 Bacterial protein of unknown function (DUF948) Lectin_N PF03954.14 ORF85039 - 3 7.6 7.0 9.9 5.9 1.5 3.6 3 0 0 3 3 3 0 Hepatic lectin, N-terminal domain Fib_alpha PF08702.10 ORF85039 - 3.9 7.6 16.5 23 5.2 3.4 4.3 5 0 0 5 5 5 0 Fibrinogen alpha/beta chain family Cytochrom_B558a PF05038.13 ORF85039 - 6.8 6.2 6.7 5.6 6.5 0.1 2.3 2 0 0 2 2 2 0 Cytochrome Cytochrome b558 alpha-subunit DUF4665 PF15679.5 ORF85039 - 7.3 7.3 5.8 15 6.3 0.2 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4665) RSN1_7TM PF02714.15 ORF23098 - 2.2e-16 60.0 34.1 3.1e-10 39.8 11.2 2.2 1 1 1 2 2 2 2 Calcium-dependent channel, 7TM region, putative phosphate PHM7_cyt PF14703.6 ORF23098 - 1.4e-15 58.0 0.4 2.4e-15 57.2 0.0 1.7 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter DNA_methylase PF00145.17 ORF23098 - 0.00041 19.8 0.2 0.00041 19.8 0.2 1.7 2 0 0 2 2 2 1 C-5 cytosine-specific DNA methylase DUF3970 PF13113.6 ORF23098 - 0.065 13.5 1.9 0.3 11.3 0.8 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3970) DSS1_SEM1 PF05160.13 ORF23098 - 0.27 11.3 7.5 0.036 14.1 2.4 2.1 2 0 0 2 2 2 0 DSS1/SEM1 family BLOC1_2 PF10046.9 ORF133522 - 0.32 11.3 20.0 1.3 9.4 0.2 5.5 4 1 1 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 NOG1_N PF17835.1 ORF82368 - 6.7e-52 175.7 1.4 6.7e-52 175.7 1.4 2.6 2 0 0 2 2 2 1 NOG1 N-terminal helical domain NOG1 PF06858.14 ORF82368 - 2.3e-21 75.3 1.4 1.5e-20 72.7 1.4 2.4 1 1 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) NOGCT PF08155.11 ORF82368 - 1.7e-17 63.1 0.4 4.3e-17 61.8 0.4 1.7 1 0 0 1 1 1 1 NOGCT (NUC087) domain MMR_HSR1 PF01926.23 ORF82368 - 2e-15 56.9 0.0 5.9e-15 55.3 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 ORF82368 - 1.1e-07 31.5 0.4 9.4e-07 28.5 0.4 2.2 1 1 0 1 1 1 1 Ferrous iron transport protein B AIG1 PF04548.16 ORF82368 - 0.0055 16.1 0.2 0.0055 16.1 0.2 1.8 2 0 0 2 2 2 1 AIG1 family Ead_Ea22 PF13935.6 ORF82368 - 0.006 17.2 0.7 0.018 15.7 0.7 1.9 1 0 0 1 1 1 1 Ead/Ea22-like protein Dynamin_N PF00350.23 ORF82368 - 0.0073 16.4 6.3 1.7 8.7 0.0 3.6 2 1 1 3 3 3 2 Dynamin family FtsX_ECD PF18075.1 ORF82368 - 0.41 11.3 6.1 12 6.6 0.5 3.6 3 1 1 4 4 4 0 FtsX extracellular domain CemA PF03040.14 ORF82368 - 6.6 6.6 6.7 7.8 6.4 3.5 2.2 2 0 0 2 2 2 0 CemA family DUF4476 PF14771.6 ORF67751 - 0.29 11.5 2.3 0.42 10.9 0.0 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4476) Oxysterol_BP PF01237.18 ORF2599 - 5.2e-116 387.5 5.3 5.2e-116 387.5 5.3 1.9 2 0 0 2 2 2 1 Oxysterol-binding protein DUF1687 PF07955.11 ORF2599 - 0.23 11.9 4.7 0.33 11.4 0.5 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1687) Rota_NSP4 PF01452.16 ORF2599 - 0.37 10.4 4.0 0.3 10.7 1.9 1.8 2 0 0 2 2 2 0 Rotavirus non structural protein HATPase_c PF02518.26 ORF90964 - 3.4e-27 95.2 0.6 1.3e-26 93.3 0.0 2.3 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 ORF90964 - 3.7e-25 88.3 0.2 1.1e-24 86.7 0.0 2.0 2 0 0 2 2 2 1 Response regulator receiver domain HATPase_c_3 PF13589.6 ORF90964 - 2.2e-05 24.3 0.0 5e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KdpC PF02669.15 ORF90964 - 0.0024 17.7 0.5 0.017 15.0 0.0 2.2 2 0 0 2 2 2 1 K+-transporting ATPase, c chain HATPase_c_5 PF14501.6 ORF90964 - 0.02 14.8 0.0 0.065 13.1 0.0 1.8 1 0 0 1 1 1 0 GHKL domain AMP-binding PF00501.28 ORF80761 - 4.9e-87 292.3 0.0 6.4e-87 291.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF80761 - 0.0088 17.0 0.0 0.021 15.8 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Ank_2 PF12796.7 ORF64325 - 3.1e-37 127.0 0.0 4.3e-15 56.1 0.0 3.7 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 ORF64325 - 6.5e-17 61.4 0.2 9.8e-07 28.9 0.0 5.0 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 ORF64325 - 1e-14 53.2 0.0 0.0093 16.4 0.0 6.0 6 0 0 6 6 6 4 Ankyrin repeat Ank PF00023.30 ORF64325 - 3.2e-14 52.6 0.0 0.097 13.2 0.0 5.8 5 0 0 5 5 5 4 Ankyrin repeat Ank_4 PF13637.6 ORF64325 - 2.4e-13 50.3 0.0 3.3e-05 24.4 0.0 4.9 2 2 2 4 4 4 4 Ankyrin repeats (many copies) EFG_IV PF03764.18 ORF53115 - 2.8e-24 85.2 0.0 2.5e-23 82.2 0.0 2.5 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF53115 - 1.7e-15 56.8 0.0 3.8e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF53115 - 5.5e-15 55.5 0.1 1.2e-14 54.4 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF53115 - 8.9e-13 48.1 0.0 2.2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II SRP68 PF16969.5 ORF50988 - 3.5e-62 211.2 32.1 9e-61 206.5 32.1 2.0 1 1 0 1 1 1 1 RNA-binding signal recognition particle 68 PI_PP_C PF18365.1 ORF50988 - 0.035 14.1 3.2 0.11 12.5 0.3 3.2 3 0 0 3 3 3 0 Phosphoinositide phosphatase C-terminal domain Choline_sulf_C PF12411.8 ORF50988 - 0.13 12.1 0.0 0.4 10.5 0.0 1.8 2 0 0 2 2 2 0 Choline sulfatase enzyme C terminal AMP-binding PF00501.28 ORF151643 - 4.9e-87 292.3 0.0 6.4e-87 291.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 ORF151643 - 0.0088 17.0 0.0 0.021 15.8 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF4795 PF16043.5 ORF142272 - 2e-07 30.8 63.8 0.00012 21.7 13.9 5.3 1 1 3 4 4 4 3 Domain of unknown function (DUF4795) Baculo_PEP_C PF04513.12 ORF142272 - 0.00013 22.0 40.0 0.14 12.2 4.0 6.1 2 1 4 6 6 6 4 Baculovirus polyhedron envelope protein, PEP, C terminus Mrx7 PF10906.8 ORF142272 - 0.18 12.1 3.1 0.28 11.5 0.6 2.7 2 0 0 2 2 2 0 MIOREX complex component 7 EFG_IV PF03764.18 ORF137581 - 2.8e-24 85.2 0.0 2.5e-23 82.2 0.0 2.5 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF137581 - 1.7e-15 56.8 0.0 3.8e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF137581 - 5.5e-15 55.5 0.1 1.2e-14 54.4 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF137581 - 8.9e-13 48.1 0.0 2.2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II Ion_trans PF00520.31 ORF13111 - 8.6e-17 61.2 15.4 1.5e-16 60.4 15.4 1.3 1 0 0 1 1 1 1 Ion transport protein cNMP_binding PF00027.29 ORF13111 - 4e-15 55.6 0.0 1.2e-14 54.1 0.0 1.8 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain EFG_IV PF03764.18 ORF128406 - 2.8e-24 85.2 0.0 2.5e-23 82.2 0.0 2.5 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF128406 - 1.7e-15 56.8 0.0 3.8e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF128406 - 5.5e-15 55.5 0.1 1.2e-14 54.4 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF128406 - 8.9e-13 48.1 0.0 2.2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_IV PF03764.18 ORF119588 - 2.8e-24 85.2 0.0 2.5e-23 82.2 0.0 2.5 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 ORF119588 - 1.7e-15 56.8 0.0 3.8e-15 55.7 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 ORF119588 - 5.5e-15 55.5 0.1 1.2e-14 54.4 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 ORF119588 - 8.9e-13 48.1 0.0 2.2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II Baculo_PEP_C PF04513.12 NODE_2808_length_2026_cov_119.079859_g1938_i0reverse_frame_1 - 1.9 8.5 35.6 0.028 14.5 2.3 5.7 4 1 0 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus Macro PF01661.21 ORF97498 - 3.3e-30 104.6 0.1 3.3e-30 104.6 0.1 2.9 3 1 0 3 3 3 1 Macro domain PMEI PF04043.15 ORF97498 - 0.017 15.4 0.4 0.27 11.5 0.4 2.7 3 0 0 3 3 3 0 Plant invertase/pectin methylesterase inhibitor Pilt PF15453.6 ORF97498 - 0.14 11.5 1.3 0.24 10.8 1.3 1.3 1 0 0 1 1 1 0 Protein incorporated later into Tight Junctions DUF2312 PF10073.9 ORF97498 - 0.18 11.5 0.1 0.18 11.5 0.1 4.7 3 1 2 5 5 5 0 Uncharacterized protein conserved in bacteria (DUF2312) FliE PF02049.18 ORF97498 - 0.39 10.9 3.5 1.4 9.1 3.5 2.0 1 0 0 1 1 1 0 Flagellar hook-basal body complex protein FliE DUF4407 PF14362.6 ORF97498 - 1.1 8.5 10.3 0.62 9.4 7.6 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) TMPIT PF07851.13 ORF97498 - 1.1 8.4 29.1 0.26 10.5 9.2 3.2 3 0 0 3 3 3 0 TMPIT-like protein DUF948 PF06103.11 ORF97498 - 1.6 9.1 8.4 1.9 8.8 0.5 4.3 3 2 1 4 4 4 0 Bacterial protein of unknown function (DUF948) FlaC_arch PF05377.11 ORF97498 - 2.1 8.8 15.3 22 5.5 0.7 5.1 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) ThiD2 PF17792.1 ORF97498 - 2.6 8.5 6.6 7 7.1 0.1 3.9 4 0 0 4 4 4 0 ThiD2 family TolA_bind_tri PF16331.5 ORF97498 - 3.4 7.8 6.3 4.3 7.5 1.1 3.3 3 0 0 3 3 3 0 TolA binding protein trimerisation DUF2203 PF09969.9 ORF97498 - 3.5 8.4 19.0 0.97 10.2 0.5 4.6 2 2 2 4 4 4 0 Uncharacterized conserved protein (DUF2203) DUF1863 PF08937.11 ORF59469 - 2.6e-05 24.5 0.6 5.2e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF59469 - 0.00017 22.1 0.8 0.0014 19.2 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF59469 - 0.06 12.1 18.0 0.1 11.3 18.0 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF59469 - 0.11 12.4 0.4 0.23 11.4 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF59469 - 7 6.5 7.0 2.1 8.1 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) DUF1863 PF08937.11 ORF45538 - 2.6e-05 24.5 0.6 5.2e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF45538 - 0.00017 22.1 0.8 0.0014 19.2 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF45538 - 0.06 12.1 18.0 0.1 11.3 18.0 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF45538 - 0.11 12.4 0.4 0.23 11.4 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF45538 - 7 6.5 7.0 2.1 8.1 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) CDC45 PF02724.14 ORF42549 - 1.1e-06 27.3 1.0 1.5e-06 26.8 1.0 1.2 1 0 0 1 1 1 1 CDC45-like protein UPF0242 PF06785.11 ORF42549 - 0.0055 16.8 4.6 0.0055 16.8 4.6 2.2 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus DUF3328 PF11807.8 ORF42549 - 0.38 10.5 5.6 0.41 10.4 0.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF3328) Big_5 PF13205.6 ORF42549 - 0.56 10.9 4.9 1.1 9.9 4.9 1.5 1 0 0 1 1 1 0 Bacterial Ig-like domain SLC12 PF03522.15 ORF42549 - 0.66 8.9 8.0 0.95 8.4 8.0 1.2 1 0 0 1 1 1 0 Solute carrier family 12 Wzy_C PF04932.15 ORF42549 - 1.1 8.9 0.0 1.1 8.9 0.0 3.7 3 1 0 3 3 3 0 O-Antigen ligase Stap_Strp_toxin PF01123.20 ORF4125 - 7.7 7.4 11.3 0.74 10.7 1.5 3.4 3 1 0 3 3 3 0 Staphylococcal/Streptococcal toxin, OB-fold domain DUF1863 PF08937.11 ORF35174 - 2.6e-05 24.5 0.6 5.2e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF35174 - 0.00017 22.1 0.8 0.0014 19.2 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF35174 - 0.06 12.1 18.0 0.1 11.3 18.0 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF35174 - 0.11 12.4 0.4 0.23 11.4 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF35174 - 7 6.5 7.0 2.1 8.1 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) ACOX PF01756.19 ORF13975 - 1.3e-17 64.0 0.0 2.1e-17 63.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_dh_M PF02770.19 ORF13975 - 1.1e-10 41.6 0.0 2e-10 40.7 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 ORF13975 - 0.00092 19.4 0.0 0.0045 17.2 0.0 2.0 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain DUF1863 PF08937.11 ORF127642 - 2.6e-05 24.5 0.6 5.2e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF127642 - 0.00017 22.1 0.8 0.0014 19.2 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF127642 - 0.06 12.1 18.0 0.1 11.3 18.0 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF127642 - 0.11 12.4 0.4 0.23 11.4 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF127642 - 7 6.5 7.0 2.1 8.1 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) Acyl_transf_3 PF01757.22 ORF115516 - 1.3e-16 60.7 43.5 1.3e-16 60.7 43.5 1.5 2 0 0 2 2 2 1 Acyltransferase family Amnionless PF14828.6 ORF115516 - 0.027 13.3 0.1 0.19 10.5 0.0 2.0 2 0 0 2 2 2 0 Amnionless DUF1863 PF08937.11 ORF109516 - 2.6e-05 24.5 0.6 5.2e-05 23.6 0.6 1.4 1 0 0 1 1 1 1 MTH538 TIR-like domain (DUF1863) TIR_2 PF13676.6 ORF109516 - 0.00017 22.1 0.8 0.0014 19.2 0.4 2.3 2 0 0 2 2 2 1 TIR domain TRP PF06011.12 ORF109516 - 0.06 12.1 18.0 0.1 11.3 18.0 1.3 1 0 0 1 1 1 0 Transient receptor potential (TRP) ion channel Adeno_GP19K PF04881.13 ORF109516 - 0.11 12.4 0.4 0.23 11.4 0.4 1.5 1 0 0 1 1 1 0 Adenovirus GP19K DUF4538 PF15061.6 ORF109516 - 7 6.5 7.0 2.1 8.1 0.7 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4538) LRR_4 PF12799.7 ORF47997 - 1.8e-09 37.7 23.4 3e-05 24.3 5.9 4.7 2 1 4 6 6 6 5 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 ORF47997 - 4.3e-08 32.8 14.9 1e-05 25.2 8.1 3.8 2 1 1 3 3 3 3 Leucine rich repeat FOXP-CC PF16159.5 ORF47997 - 0.0047 17.5 0.4 0.028 15.1 0.1 2.5 2 0 0 2 2 2 1 FOXP coiled-coil domain zf-Di19 PF05605.12 ORF47997 - 0.0096 16.2 0.1 0.018 15.3 0.1 1.5 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding GIT_CC PF16559.5 ORF47997 - 0.017 15.0 1.0 0.017 15.0 1.0 4.8 5 0 0 5 5 5 0 GIT coiled-coil Rho guanine nucleotide exchange factor zf-C2H2 PF00096.26 ORF47997 - 0.019 15.4 0.2 0.019 15.4 0.2 1.9 2 0 0 2 2 1 0 Zinc finger, C2H2 type zf_Hakai PF18408.1 ORF47997 - 0.022 14.4 0.0 0.041 13.6 0.0 1.4 1 0 0 1 1 1 0 C2H2 Hakai zinc finger domain zf-C2H2_4 PF13894.6 ORF47997 - 0.061 14.2 0.2 0.15 13.0 0.2 1.7 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_3rep PF18868.1 ORF47997 - 0.23 12.2 3.5 1.6 9.4 0.2 3.5 2 1 0 2 2 2 0 Zinc finger C2H2-type, 3 repeats Ndc1_Nup PF09531.10 ORF47997 - 0.3 9.7 5.7 0.63 8.7 5.7 1.5 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PKcGMP_CC PF16808.5 ORF47997 - 7.8 6.4 12.7 34 4.4 0.1 4.2 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase CHDCT2 PF08074.11 ORF47997 - 9.4 6.4 12.6 6 7.0 5.5 3.3 2 1 0 2 2 2 0 CHDCT2 (NUC038) domain Cytokin_check_N PF10407.9 ORF104299 - 1.9e-05 24.5 0.0 5.9e-05 22.9 0.0 1.9 1 0 0 1 1 1 1 Cdc14 phosphatase binding protein N-terminus Arm PF00514.23 ORF104299 - 0.058 13.5 0.0 0.59 10.3 0.0 2.8 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat AAA_2 PF07724.14 ORF57570 - 2.4e-51 174.3 0.0 6.3e-51 172.9 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF57570 - 4.2e-31 107.0 4.0 1e-30 105.7 4.0 1.7 1 0 0 1 1 1 1 AAA lid domain ClpB_D2-small PF10431.9 ORF57570 - 4.9e-20 71.4 0.0 2.1e-19 69.4 0.0 2.2 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 ORF57570 - 5.5e-18 65.7 0.0 1.3e-08 35.3 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF57570 - 8.5e-12 45.2 0.0 2.4e-11 43.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF57570 - 2.8e-06 27.6 0.3 0.0046 17.2 0.1 4.0 2 2 1 3 3 3 1 AAA domain Sigma54_activat PF00158.26 ORF57570 - 0.0002 21.1 0.0 0.00045 20.0 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain TniB PF05621.11 ORF57570 - 0.00036 20.0 0.0 0.062 12.7 0.0 2.5 2 0 0 2 2 2 1 Bacterial TniB protein AAA_18 PF13238.6 ORF57570 - 0.00063 20.3 0.0 0.0032 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain UVR PF02151.19 ORF57570 - 0.00089 18.9 9.7 0.0015 18.2 8.7 2.0 1 1 1 2 2 2 1 UvrB/uvrC motif AAA_14 PF13173.6 ORF57570 - 0.0025 17.8 0.0 0.36 10.9 0.0 2.7 2 0 0 2 2 2 1 AAA domain DUF2283 PF10049.9 ORF57570 - 0.0055 16.9 1.8 4.2 7.7 0.1 3.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2283) AAA_16 PF13191.6 ORF57570 - 0.006 17.0 1.3 0.13 12.6 0.0 3.2 4 0 0 4 4 3 1 AAA ATPase domain IstB_IS21 PF01695.17 ORF57570 - 0.0091 15.7 0.0 0.029 14.1 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 ORF57570 - 0.018 15.2 0.6 0.12 12.5 0.0 2.7 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF57570 - 0.019 15.4 0.2 0.16 12.4 0.0 2.5 2 1 0 2 2 2 0 RNA helicase Torsin PF06309.11 ORF57570 - 0.019 15.1 0.0 0.06 13.5 0.0 1.8 1 0 0 1 1 1 0 Torsin Vps4_C PF09336.10 ORF57570 - 0.045 13.8 0.1 0.19 11.7 0.1 2.1 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain ResIII PF04851.15 ORF57570 - 0.052 13.5 0.0 0.95 9.4 0.0 2.7 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 ORF57570 - 0.068 12.9 0.0 0.17 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF57570 - 0.095 12.6 0.0 0.36 10.7 0.0 1.9 1 1 0 1 1 1 0 RsgA GTPase RuvB_N PF05496.12 ORF57570 - 0.12 12.2 0.3 1.9 8.2 0.0 2.7 3 0 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain ABC_tran PF00005.27 ORF57570 - 0.17 12.4 0.1 1.6 9.3 0.0 2.5 2 1 0 2 2 2 0 ABC transporter AAA_28 PF13521.6 ORF57570 - 0.96 9.7 5.2 0.95 9.7 0.1 3.4 2 2 1 3 3 3 0 AAA domain AAA_23 PF13476.6 ORF57570 - 1.3 9.5 5.9 1.2 9.7 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_2 PF07724.14 ORF148161 - 2.4e-51 174.3 0.0 6.3e-51 172.9 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 ORF148161 - 4.2e-31 107.0 4.0 1e-30 105.7 4.0 1.7 1 0 0 1 1 1 1 AAA lid domain ClpB_D2-small PF10431.9 ORF148161 - 4.9e-20 71.4 0.0 2.1e-19 69.4 0.0 2.2 2 0 0 2 2 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 ORF148161 - 5.5e-18 65.7 0.0 1.3e-08 35.3 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 ORF148161 - 8.5e-12 45.2 0.0 2.4e-11 43.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 ORF148161 - 2.8e-06 27.6 0.3 0.0046 17.2 0.1 4.0 2 2 1 3 3 3 1 AAA domain Sigma54_activat PF00158.26 ORF148161 - 0.0002 21.1 0.0 0.00045 20.0 0.0 1.6 1 0 0 1 1 1 1 Sigma-54 interaction domain TniB PF05621.11 ORF148161 - 0.00036 20.0 0.0 0.062 12.7 0.0 2.5 2 0 0 2 2 2 1 Bacterial TniB protein AAA_18 PF13238.6 ORF148161 - 0.00063 20.3 0.0 0.0032 18.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain UVR PF02151.19 ORF148161 - 0.00089 18.9 9.7 0.0015 18.2 8.7 2.0 1 1 1 2 2 2 1 UvrB/uvrC motif AAA_14 PF13173.6 ORF148161 - 0.0025 17.8 0.0 0.36 10.9 0.0 2.7 2 0 0 2 2 2 1 AAA domain DUF2283 PF10049.9 ORF148161 - 0.0055 16.9 1.8 4.2 7.7 0.1 3.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2283) AAA_16 PF13191.6 ORF148161 - 0.006 17.0 1.3 0.13 12.6 0.0 3.2 4 0 0 4 4 3 1 AAA ATPase domain IstB_IS21 PF01695.17 ORF148161 - 0.0091 15.7 0.0 0.029 14.1 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 ORF148161 - 0.018 15.2 0.6 0.12 12.5 0.0 2.7 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 ORF148161 - 0.019 15.4 0.2 0.16 12.4 0.0 2.5 2 1 0 2 2 2 0 RNA helicase Torsin PF06309.11 ORF148161 - 0.019 15.1 0.0 0.06 13.5 0.0 1.8 1 0 0 1 1 1 0 Torsin Vps4_C PF09336.10 ORF148161 - 0.045 13.8 0.1 0.19 11.7 0.1 2.1 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain ResIII PF04851.15 ORF148161 - 0.052 13.5 0.0 0.95 9.4 0.0 2.7 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 ORF148161 - 0.068 12.9 0.0 0.17 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 ORF148161 - 0.095 12.6 0.0 0.36 10.7 0.0 1.9 1 1 0 1 1 1 0 RsgA GTPase RuvB_N PF05496.12 ORF148161 - 0.12 12.2 0.3 1.9 8.2 0.0 2.7 3 0 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain ABC_tran PF00005.27 ORF148161 - 0.17 12.4 0.1 1.6 9.3 0.0 2.5 2 1 0 2 2 2 0 ABC transporter AAA_28 PF13521.6 ORF148161 - 0.96 9.7 5.2 0.95 9.7 0.1 3.4 2 2 1 3 3 3 0 AAA domain AAA_23 PF13476.6 ORF148161 - 1.3 9.5 5.9 1.2 9.7 0.0 2.6 2 1 0 2 2 2 0 AAA domain PAS PF00989.25 ORF122014 - 3.6e-22 78.5 0.5 1.4e-21 76.6 0.0 2.2 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.26 ORF122014 - 4e-22 78.8 0.0 8.7e-22 77.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 ORF122014 - 4.2e-17 61.9 0.5 2.7e-16 59.4 0.1 2.5 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 ORF122014 - 4.4e-12 46.2 0.0 1.1e-11 44.9 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 ORF122014 - 3.5e-11 43.3 0.2 1.7e-10 41.1 0.1 2.3 3 0 0 3 3 3 1 PAS fold PAS_8 PF13188.7 ORF122014 - 1e-05 25.4 0.0 3.9e-05 23.5 0.0 2.0 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 ORF122014 - 0.00068 19.5 0.0 0.0014 18.5 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 ORF122014 - 0.0093 15.9 0.0 0.024 14.5 0.0 1.6 1 0 0 1 1 1 1 GHKL domain HisKA_4TM PF16926.5 ORF122014 - 0.012 15.2 0.1 0.03 13.9 0.1 1.6 1 0 0 1 1 1 0 Archaeal 4TM region of histidine kinase HAMP PF00672.25 ORF122014 - 0.014 15.7 0.2 0.047 14.1 0.2 2.0 1 0 0 1 1 1 0 HAMP domain HisKA_2 PF07568.12 ORF122014 - 0.092 12.9 0.4 0.35 11.0 0.2 2.0 1 1 1 2 2 2 0 Histidine kinase ACOX PF01756.19 ORF47766 - 2.2e-17 63.2 0.0 4.7e-17 62.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_dh_M PF02770.19 ORF47766 - 1e-12 48.0 0.0 2e-12 47.2 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 ORF47766 - 0.0028 17.9 0.0 0.0077 16.5 0.0 1.7 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 ORF47766 - 0.1 13.2 0.0 0.26 11.9 0.0 1.7 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal DUF4692 PF15763.5 ORF101369 - 0.0063 17.0 0.1 0.024 15.1 0.1 2.0 1 0 0 1 1 1 1 Regulator of human erythroid cell expansion (RHEX) Orbi_VP2 PF00898.17 ORF101369 - 0.1 10.4 0.1 0.14 9.9 0.1 1.1 1 0 0 1 1 1 0 Orbivirus outer capsid protein VP2 WD40 PF00400.32 ORF9727 - 5.3e-07 30.2 0.6 0.15 13.0 0.0 4.3 5 0 0 5 5 5 2 WD domain, G-beta repeat zf-B_box PF00643.24 ORF9727 - 0.00027 21.0 3.8 0.00047 20.2 3.8 1.4 1 0 0 1 1 1 1 B-box zinc finger DUF4327 PF14217.6 ORF84567 - 0.0029 17.7 0.2 0.0072 16.4 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4327) HD_4 PF13328.6 ORF84567 - 0.19 11.5 3.1 0.15 11.8 0.8 2.1 2 0 0 2 2 2 0 HD domain DUF4327 PF14217.6 ORF47663 - 0.0029 17.7 0.2 0.0072 16.4 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4327) HD_4 PF13328.6 ORF47663 - 0.19 11.5 3.1 0.15 11.8 0.8 2.1 2 0 0 2 2 2 0 HD domain cNMP_binding PF00027.29 ORF136584 - 0.0013 18.8 0.0 0.005 16.9 0.0 2.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain ArsR PF09824.9 ORF136584 - 0.041 13.5 0.3 0.56 9.8 0.3 2.4 2 0 0 2 2 2 0 ArsR transcriptional regulator Pkinase PF00069.25 ORF128646 - 7.2e-22 78.0 4.6 5.5e-11 42.3 0.0 2.9 3 0 0 3 3 3 2 Protein kinase domain MORN PF02493.20 ORF128646 - 2e-11 43.0 32.5 0.00031 20.5 0.1 6.6 6 0 0 6 6 6 4 MORN repeat Pkinase_Tyr PF07714.17 ORF128646 - 5.3e-11 42.3 0.1 0.00013 21.3 0.2 2.6 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 ORF128646 - 2.4e-05 23.8 0.0 0.091 12.1 0.0 2.3 2 0 0 2 2 2 2 Kinase-like Proton_antipo_M PF00361.20 ORF115971 - 7.3e-54 182.9 28.3 7.3e-54 182.9 28.3 2.9 1 1 1 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 ORF115971 - 9.5e-05 22.4 3.2 9.5e-05 22.4 3.2 3.2 3 1 0 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF4225 PF13988.6 ORF115971 - 0.22 11.1 1.7 0.25 10.9 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF4225) PsaA_PsaB PF00223.19 ORF8015 - 6.9e-127 424.5 39.5 9.9e-122 407.5 39.5 3.8 1 1 0 1 1 1 1 Photosystem I psaA/psaB protein HTH_9 PF08221.11 ORF8015 - 0.012 15.7 1.2 0.44 10.7 1.0 2.6 1 1 1 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain A_deaminase PF00962.22 ORF126974 - 4.8e-98 328.5 0.0 6.3e-98 328.1 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase Adenylate_cycl PF01295.18 ORF93392 - 3.4e-209 696.4 0.0 3.9e-209 696.2 0.0 1.0 1 0 0 1 1 1 1 Adenylate cyclase, class-I Adenyl_cycl_N PF12633.7 ORF93392 - 0.071 13.0 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Adenylate cyclase NT domain Anoctamin PF04547.12 ORF85029 - 0.006 15.5 0.0 0.013 14.4 0.0 1.6 1 1 0 1 1 1 1 Calcium-activated chloride channel zf-B_box PF00643.24 ORF85029 - 0.015 15.4 5.0 0.015 15.4 5.0 2.0 2 0 0 2 2 2 0 B-box zinc finger Syndecan PF01034.20 ORF85029 - 2.8 7.9 6.8 0.97 9.4 0.3 3.2 3 0 0 3 3 3 0 Syndecan domain Glyco_hydro_31 PF01055.26 ORF78625 - 6.3e-96 322.2 1.4 8.2e-96 321.9 1.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF78625 - 0.082 13.2 0.1 0.21 11.9 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) Glyco_hydro_31 PF01055.26 ORF52681 - 1.1e-97 328.1 2.7 1.3e-97 327.8 2.7 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 DUF5110 PF17137.4 ORF52681 - 0.072 13.4 0.1 0.18 12.1 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) Vps52 PF04129.12 ORF46541 - 4.4e-72 243.5 36.3 7e-72 242.8 36.3 1.3 1 0 0 1 1 1 1 Vps52 / Sac2 family Sec3_C PF09763.9 ORF46541 - 2.4e-13 49.4 18.0 2.4e-13 49.4 18.0 2.4 2 1 0 2 2 2 2 Exocyst complex component Sec3 DUF885 PF05960.11 ORF46541 - 0.00067 19.4 0.0 0.0016 18.2 0.0 1.6 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF885) Chalcone_3 PF16036.5 ORF46541 - 0.03 14.4 1.0 0.076 13.1 0.2 2.1 2 0 0 2 2 2 0 Chalcone isomerase-like NTPase_1 PF03266.15 ORF46541 - 0.34 10.8 2.7 1.5 8.7 0.3 2.8 1 1 1 2 2 2 0 NTPase ABC_tran PF00005.27 ORF18878 - 1.4e-06 28.8 0.0 3.1e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 ORF18878 - 0.047 13.3 5.7 0.087 12.5 5.7 1.4 1 1 0 1 1 1 0 ABC transporter transmembrane region U79_P34 PF03064.16 ORF18878 - 0.064 12.6 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 HSV U79 / HCMV P34 E7 PF00527.18 ORF18878 - 0.2 11.9 0.2 0.49 10.6 0.2 1.6 1 0 0 1 1 1 0 E7 protein, Early protein # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks9.fa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks9.PFam32-A --tblout SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks9.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-L1184-Euplotes_sym_SMART-seq/transcripts.min60aa_Euplotid_ORF.6frame.chunks9.fa # Current dir: /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-29-NextSeq-run # Date: Sun Dec 1 18:33:26 2019 # [ok]